BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780548|ref|YP_003064961.1| translocation protein TolB
[Candidatus Liberibacter asiaticus str. psy62]
         (447 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780548|ref|YP_003064961.1| translocation protein TolB [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040225|gb|ACT57021.1| translocation protein TolB [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 447

 Score =  911 bits (2355), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 447/447 (100%), Positives = 447/447 (100%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE
Sbjct: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG
Sbjct: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
           KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV
Sbjct: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY
Sbjct: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT
Sbjct: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL
Sbjct: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS
Sbjct: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDLNGRNETLINTPAYASDPQWVGFMD
Sbjct: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447


>gi|315122876|ref|YP_004063365.1| translocation protein TolB [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496278|gb|ADR52877.1| translocation protein TolB [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 435

 Score =  661 bits (1705), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 315/435 (72%), Positives = 369/435 (84%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M + + LLLVL+ GFF   + A VKV  N+++YSPVSIA T FVS+DELGGK SEV+SK+
Sbjct: 1   MNVKIFLLLVLVSGFFSVPVQALVKVNVNNSDYSPVSIAVTDFVSLDELGGKFSEVISKN 60

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           LQ+SDVF  I Q SFKQKITNPD  PRF DW SLGAQVLV GRVIKEGKDRLRVEFRLWD
Sbjct: 61  LQKSDVFTQIPQGSFKQKITNPDITPRFHDWQSLGAQVLVMGRVIKEGKDRLRVEFRLWD 120

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           +KDRKQI+GKKFF+SP  WR++AH ISD+IYQ+ITGEK  FN+R+LFVSES+VSG+IKN 
Sbjct: 121 IKDRKQILGKKFFASPVDWRRLAHIISDEIYQNITGEKSYFNTRLLFVSESIVSGVIKNR 180

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           LC+MD+DG N+RYLTP+ D+ILF P+F P QQKVAYA+YDDEDIL+VYLMD RIDRAPKR
Sbjct: 181 LCLMDQDGFNVRYLTPNSDRILFTPQFYPKQQKVAYASYDDEDILKVYLMDIRIDRAPKR 240

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           IGNFR M ++PRFS +G R ++ VQK+ A+D+Y+VD+ S A +RLTNTLF NIS SYSPD
Sbjct: 241 IGNFRGMNISPRFSLDGNRVIMGVQKEGAIDLYNVDVHSYAFKRLTNTLFANISPSYSPD 300

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           SSQIVFESDREGK+QLYVMQS+GSDQ+RISQDK+A YFDP WSP  ++IAFTKFS  KFA
Sbjct: 301 SSQIVFESDREGKQQLYVMQSDGSDQRRISQDKDAFYFDPSWSPNDNIIAFTKFSEGKFA 360

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           IGVM+ DGSQER+LV D NLQ P WSP+GRSLIF+RKK  D GSKLYSI+LNGRNE LIN
Sbjct: 361 IGVMRVDGSQERILVTDFNLQTPIWSPNGRSLIFARKKMDDIGSKLYSINLNGRNEMLIN 420

Query: 433 TPAYASDPQWVGFMD 447
           TPAYA DP W+  +D
Sbjct: 421 TPAYALDPHWIAPVD 435


>gi|159185873|ref|NP_356906.2| translocation protein TolB [Agrobacterium tumefaciens str. C58]
 gi|32699707|sp|Q8U9L4|TOLB_AGRT5 RecName: Full=Protein tolB; Flags: Precursor
 gi|159141007|gb|AAK89691.2| tolB protein [Agrobacterium tumefaciens str. C58]
          Length = 435

 Score =  426 bits (1096), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/433 (48%), Positives = 295/433 (68%), Gaps = 4/433 (0%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           I L L +  +   F     A V++  N  N  P+ IA T F+S D +G +VS V++ DLQ
Sbjct: 7   IRLVLAIAALMSVFSAPAFARVEININKGNVEPLPIAITDFMSSDGIGAQVSAVIAADLQ 66

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           RS +F  +++++F +KI+NPD  PRF+DW  + AQ LVTGRV +E   RLR EFRLWD  
Sbjct: 67  RSGLFAPVNKNAFIEKISNPDQQPRFEDWKVINAQALVTGRVTRESDGRLRAEFRLWDTF 126

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             +Q+ G++FF+ P +WR++AH I+D IY+ +TGEKG F++R++FVSES      K  L 
Sbjct: 127 AGQQLSGQQFFTQPENWRRVAHIIADAIYERVTGEKGYFDTRVVFVSESGPKTARKRQLS 186

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD+DG N+R LT S D I+  PRFSPN+Q+V Y +++ +   RVYL+     +  + +G
Sbjct: 187 IMDQDGFNVRNLTNSND-IVLTPRFSPNRQEVTYMSFEGQQ-PRVYLLQLETGQR-EVVG 243

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           NF  M  +PRFS +G++ ++S+Q+D   +IY++DL+S  T RLTNT  I+ + SYSPD  
Sbjct: 244 NFPGMTFSPRFSPDGQKVIMSLQQDGNANIYTMDLRSRTTTRLTNTAAIDTAPSYSPDGQ 303

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++ FESDR G++Q+YVM ++GS Q+R+S   + SY  PVWSP+GDLIAFTK SG KF+IG
Sbjct: 304 RVAFESDRGGRQQIYVMNADGSGQQRVSFG-DGSYSTPVWSPRGDLIAFTKQSGGKFSIG 362

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           VMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE LI TP
Sbjct: 363 VMKTDGSGERILTSGFHNEGPTWAPNGRVLMFFRQNAGAGGPQLYSIDLTGYNEQLIKTP 422

Query: 435 AYASDPQWVGFMD 447
            +ASDP W   +D
Sbjct: 423 TFASDPAWSPLLD 435


>gi|332716443|ref|YP_004443909.1| protein tolB precursor [Agrobacterium sp. H13-3]
 gi|325063128|gb|ADY66818.1| protein tolB precursor [Agrobacterium sp. H13-3]
          Length = 443

 Score =  425 bits (1093), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 212/440 (48%), Positives = 296/440 (67%), Gaps = 8/440 (1%)

Query: 12  NMKI----NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
           NMKI     L L +  +   F     A V++  N  N  P+ IA T F+S D +G +VS 
Sbjct: 8   NMKIFSPIRLVLAVAALMSVFSAPAFARVEININKGNVEPLPIAITDFISGDGIGAQVSA 67

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V++ DLQRS +F  +++ +F +KI NPD  PRF+DW  + AQ LVTGRV +E   RLR E
Sbjct: 68  VIAADLQRSGLFAPVNKSAFIEKIANPDQQPRFEDWKVINAQALVTGRVTRESDGRLRAE 127

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           FRLWD    +Q+ G++FF+ P +WR++AH I+D IY+ +TGEKG F++R++FVSES    
Sbjct: 128 FRLWDTFAGQQMTGQQFFTQPENWRRVAHIIADAIYERVTGEKGYFDTRVVFVSESGPKT 187

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  L +MD+DG N+R LT S D I+  PRFSPN+Q+V Y +++ +   RVYL+     
Sbjct: 188 ARKRQLSIMDQDGFNVRNLTNSND-IVLTPRFSPNRQEVTYMSFEGQQ-PRVYLLQLETG 245

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  + +GNF  M  +PRFS +G++ ++S+Q+D   +IY++DL+S  T RLTNT  I+ + 
Sbjct: 246 QR-EVVGNFPGMTFSPRFSPDGQKVIMSLQQDGNANIYTMDLRSRTTTRLTNTSAIDTAP 304

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SPD  ++ FESDR G++Q+YVM ++GS Q+RIS   + SY  PVWSP+GDLIAFTK S
Sbjct: 305 SFSPDGQRVAFESDRGGRQQIYVMNADGSGQQRIS-FGDGSYSTPVWSPRGDLIAFTKQS 363

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G KF+IGVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G N
Sbjct: 364 GGKFSIGVMKTDGSGERILTSGFHNEGPTWAPNGRVLMFFRQNAGAGGPQLYSIDLTGYN 423

Query: 428 ETLINTPAYASDPQWVGFMD 447
           E LI TP +ASDP W   +D
Sbjct: 424 EQLIKTPTFASDPAWSPLLD 443


>gi|15966492|ref|NP_386845.1| translocation protein TolB [Sinorhizobium meliloti 1021]
 gi|32699712|sp|Q926C2|TOLB_RHIME RecName: Full=Protein tolB; Flags: Precursor
 gi|15075763|emb|CAC47318.1| Probable TolB protein precursor [Sinorhizobium meliloti 1021]
          Length = 436

 Score =  425 bits (1093), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 212/431 (49%), Positives = 296/431 (68%), Gaps = 5/431 (1%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L ++LV   G   +  +A V++  N  N  P+ IA T F+   EL  K+S V++ DL+RS
Sbjct: 11  LLMVLVAGCGLIASPANALVEININKGNVEPLPIAITDFLQ-GELAQKISGVIAADLKRS 69

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
            +F  I + +F +KI+NPD+ PRF+DW  + AQ LV GRV +EG  RL+ EFRLWD    
Sbjct: 70  GLFAPIDKGAFIEKISNPDATPRFEDWKVINAQALVIGRVTQEGDGRLKAEFRLWDTFAG 129

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q++G++F++ P +WR++AH I+D IY+ ITGEKG F++RI++V+ES      K  L +M
Sbjct: 130 QQMLGQQFYTQPENWRRVAHIIADAIYERITGEKGYFDTRIVYVAESGPKNARKRQLAIM 189

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DGAN R LT S D I+  PRFSPN+Q++ Y +++++   RVYL+     +  + +GNF
Sbjct: 190 DQDGANSRALTNSND-IVLTPRFSPNRQEITYMSFENQQP-RVYLLQLETGQR-EVVGNF 246

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             M  APRFS +G+R ++S+Q++   +IY++DL+S  T RLTNT  I+ S SYSPD S+I
Sbjct: 247 PGMTFAPRFSPDGQRVIMSLQQEGNANIYTMDLRSRTTTRLTNTAAIDTSPSYSPDGSRI 306

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VFESDR GK+QLYVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK SG KF+IGVM
Sbjct: 307 VFESDRGGKQQLYVMGADGSGQTRIS-FGDGSYSTPVWSPRGDLIAFTKQSGGKFSIGVM 365

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE L+ T  +
Sbjct: 366 KPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQNAGAGGPQLYSIDLTGYNEQLVQTQGF 425

Query: 437 ASDPQWVGFMD 447
           ASDP W   M+
Sbjct: 426 ASDPAWSPLME 436


>gi|307300471|ref|ZP_07580251.1| Tol-Pal system beta propeller repeat protein TolB [Sinorhizobium
           meliloti BL225C]
 gi|307318336|ref|ZP_07597771.1| Tol-Pal system beta propeller repeat protein TolB [Sinorhizobium
           meliloti AK83]
 gi|306896018|gb|EFN26769.1| Tol-Pal system beta propeller repeat protein TolB [Sinorhizobium
           meliloti AK83]
 gi|306904637|gb|EFN35221.1| Tol-Pal system beta propeller repeat protein TolB [Sinorhizobium
           meliloti BL225C]
          Length = 434

 Score =  425 bits (1093), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 212/431 (49%), Positives = 296/431 (68%), Gaps = 5/431 (1%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L ++LV   G   +  +A V++  N  N  P+ IA T F+   EL  K+S V++ DL+RS
Sbjct: 9   LLMVLVAGCGLIASPANALVEININKGNVEPLPIAITDFLQ-GELAQKISGVIAADLKRS 67

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
            +F  I + +F +KI+NPD+ PRF+DW  + AQ LV GRV +EG  RL+ EFRLWD    
Sbjct: 68  GLFAPIDKGAFIEKISNPDATPRFEDWKVINAQALVIGRVTQEGDGRLKAEFRLWDTFAG 127

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q++G++F++ P +WR++AH I+D IY+ ITGEKG F++RI++V+ES      K  L +M
Sbjct: 128 QQMLGQQFYTQPENWRRVAHIIADAIYERITGEKGYFDTRIVYVAESGPKNARKRQLAIM 187

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DGAN R LT S D I+  PRFSPN+Q++ Y +++++   RVYL+     +  + +GNF
Sbjct: 188 DQDGANSRALTNSND-IVLTPRFSPNRQEITYMSFENQQP-RVYLLQLETGQR-EVVGNF 244

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             M  APRFS +G+R ++S+Q++   +IY++DL+S  T RLTNT  I+ S SYSPD S+I
Sbjct: 245 PGMTFAPRFSPDGQRVIMSLQQEGNANIYTMDLRSRTTTRLTNTAAIDTSPSYSPDGSRI 304

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VFESDR GK+QLYVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK SG KF+IGVM
Sbjct: 305 VFESDRGGKQQLYVMGADGSGQTRISFG-DGSYSTPVWSPRGDLIAFTKQSGGKFSIGVM 363

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE L+ T  +
Sbjct: 364 KPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQNAGAGGPQLYSIDLTGYNEQLVQTQGF 423

Query: 437 ASDPQWVGFMD 447
           ASDP W   M+
Sbjct: 424 ASDPAWSPLME 434


>gi|150397825|ref|YP_001328292.1| translocation protein TolB [Sinorhizobium medicae WSM419]
 gi|166229991|sp|A6UCS7|TOLB_SINMW RecName: Full=Protein tolB; Flags: Precursor
 gi|150029340|gb|ABR61457.1| Tol-Pal system beta propeller repeat TolB [Sinorhizobium medicae
           WSM419]
          Length = 436

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 210/431 (48%), Positives = 296/431 (68%), Gaps = 5/431 (1%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L ++LV   G   +   A V++  N  N  P+ IA T FV   EL  K+S+V++ DL+RS
Sbjct: 11  LLMVLVAGCGLIASPAKALVEIDINKGNVEPLPIAITDFVQ-GELAQKISDVIAADLKRS 69

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
            +F  I++ +F +K++NPD+ PRF+DW  + AQ LV GRV KEG  RL+ EFRLWD    
Sbjct: 70  GLFAPINKGAFIEKVSNPDATPRFEDWKVINAQALVIGRVTKEGDGRLKAEFRLWDTFAG 129

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
            Q++G++F++ P +WR++AH I+D IY+ ITGEKG F++RI++V+ES      +  L +M
Sbjct: 130 TQMLGQQFYTQPENWRRVAHIIADAIYERITGEKGYFDTRIVYVAESGPKNARQRQLAIM 189

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DGAN R LT S D I+  PRFSPN+Q++ Y +++++   RVYL+     +  + +GNF
Sbjct: 190 DQDGANSRALTNSND-IVLTPRFSPNRQEITYMSFENQQP-RVYLLQLETGQR-EVVGNF 246

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             M  APRFS +G+R ++S+Q++   +IY++DL+S  T RLTNT  I+ S SYSPD S++
Sbjct: 247 PGMTFAPRFSPDGQRVIMSLQQEGNANIYTMDLRSRTTTRLTNTAAIDTSPSYSPDGSRV 306

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VFESDR G++QLYVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK SG KF+IGVM
Sbjct: 307 VFESDRGGRQQLYVMGADGSGQTRISFG-DGSYSTPVWSPRGDLIAFTKQSGGKFSIGVM 365

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE L+ T  +
Sbjct: 366 KPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQNAGAGGPQLYSIDLTGYNEQLVPTQGF 425

Query: 437 ASDPQWVGFMD 447
           ASDP W   M+
Sbjct: 426 ASDPAWSPLME 436


>gi|163758790|ref|ZP_02165877.1| translocation protein TolB precursor [Hoeflea phototrophica DFL-43]
 gi|162284080|gb|EDQ34364.1| translocation protein TolB precursor [Hoeflea phototrophica DFL-43]
          Length = 450

 Score =  423 bits (1088), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 208/448 (46%), Positives = 307/448 (68%), Gaps = 5/448 (1%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTS-IHAFVKVATNSANYSPVSIAFTKFVSID 59
           M+L+      +N  +     +V    F  +S   A V++  N AN  P+ IA T F+S D
Sbjct: 7   MALKGCTMNLMNRLVLFPFAIVAALAFLASSPARAVVEIDINRANVEPLPIAITDFLSDD 66

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
            +G ++S VV+ DL+RS +F  I++ +F ++I+NPD+ PRF+DW  + AQ LV GRV++E
Sbjct: 67  AIGAQISAVVAADLKRSGLFAPIAKGAFIERISNPDASPRFEDWRVINAQALVVGRVVRE 126

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
              RLR EFRLWD    +Q+ G++FF+SP +WR++AH I+D IY+ +TGEKG F+SR++F
Sbjct: 127 SDGRLRAEFRLWDTFASQQLTGEQFFTSPENWRRVAHIIADAIYERLTGEKGYFDSRVVF 186

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           VSES      +  L +MD+DGAN+R LT +   I+  PRFSP++Q++ Y +++     RV
Sbjct: 187 VSESGPKTDRQKQLAIMDQDGANVRMLTDA-SSIVLTPRFSPSRQEITYMSFEGGQP-RV 244

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           YL+     +  + +GNF  M  +PRFS +G++ ++S+Q+D   +IY++DL+S AT RLT+
Sbjct: 245 YLLQLETGQR-ELVGNFPGMTFSPRFSPDGQKVIMSLQQDGNANIYTMDLRSRATTRLTS 303

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T  I+ S SYSPD +QIVFESDR G++QLY+M ++GS+Q+R+S   + SY  PVWSP+GD
Sbjct: 304 TAAIDTSPSYSPDGTQIVFESDRGGRQQLYIMNADGSNQRRVSFG-DGSYSTPVWSPRGD 362

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           LIAFTK SG KF+IGVM+ DGS ER+L    + + PTW+P+GR L+F R+  G  G ++Y
Sbjct: 363 LIAFTKQSGGKFSIGVMRTDGSGERILTTGFHNEGPTWAPNGRVLMFFRQPAGAGGPQIY 422

Query: 420 SIDLNGRNETLINTPAYASDPQWVGFMD 447
           SIDL G NE L++TP +ASDP W   ++
Sbjct: 423 SIDLTGYNEQLVSTPTFASDPAWSPLLE 450


>gi|239832783|ref|ZP_04681112.1| Tol-Pal system beta propeller repeat protein TolB [Ochrobactrum
           intermedium LMG 3301]
 gi|239825050|gb|EEQ96618.1| Tol-Pal system beta propeller repeat protein TolB [Ochrobactrum
           intermedium LMG 3301]
          Length = 475

 Score =  408 bits (1049), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 203/431 (47%), Positives = 293/431 (67%), Gaps = 7/431 (1%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           C++   +    P    A V++  N     P+ IA T F+S D+LG  ++ V++ DL+RS 
Sbjct: 51  CMIAASLVCTMPA--RAVVEININKGVIEPLPIAITDFLSADQLGPNITSVIAADLERSG 108

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+   RL+ EFRLWD    +
Sbjct: 109 LFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPDGRLKAEFRLWDTFGGQ 168

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           Q+IG++FF++P +WR++AH I+D IY+ +TGEKG F++R++FV ES  +      L +MD
Sbjct: 169 QMIGQQFFTTPDNWRRVAHIIADAIYERLTGEKGYFDTRVVFVDESGPAQKRVKRLAIMD 228

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGAN+RY++  R  I   PRFSPN+Q+V Y +Y+     +VYL+     +  + +GNF 
Sbjct: 229 QDGANVRYISDGR-AISLTPRFSPNRQEVTYMSYEG-GTPKVYLLQLETGQR-ELVGNFP 285

Query: 258 SMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            M +APRFS +G++ ++S +Q D + +IY++DL++ +T RLTN+  I+  ASYSPD SQI
Sbjct: 286 GMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRSTTRLTNSQAIDTGASYSPDGSQI 345

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDLIAFTK S  +F+IGVM
Sbjct: 346 VFTSDRGGRPQLYVMGADGSNPRRISMG-DGSYSTPVWSPRGDLIAFTKQSQGQFSIGVM 404

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++IDL GRNE  I TP +
Sbjct: 405 KTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFTIDLTGRNERQIQTPNF 464

Query: 437 ASDPQWVGFMD 447
           ASDP W   ++
Sbjct: 465 ASDPAWSPLLE 475


>gi|153008549|ref|YP_001369764.1| translocation protein TolB [Ochrobactrum anthropi ATCC 49188]
 gi|166229982|sp|A6WY81|TOLB_OCHA4 RecName: Full=Protein tolB; Flags: Precursor
 gi|151560437|gb|ABS13935.1| Tol-Pal system beta propeller repeat TolB [Ochrobactrum anthropi
           ATCC 49188]
          Length = 443

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 203/431 (47%), Positives = 294/431 (68%), Gaps = 7/431 (1%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           C++   +    P    A V++  N     P+ IA T F+S D+LG  ++ V++ DL+RS 
Sbjct: 19  CMIAASLVCTMPA--RAVVEININKGVIEPLPIAITDFLSADQLGPNITSVIAADLERSG 76

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+   RL+ EFRLWD    +
Sbjct: 77  LFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPDGRLKAEFRLWDTFGGQ 136

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           Q+IG++FF++P +WR++AH I+D IY+ +TGEKG F++R++FV ES  +      L +MD
Sbjct: 137 QMIGQQFFTTPDNWRRVAHIIADAIYERLTGEKGYFDTRVVFVDESGPAQKRVKRLAIMD 196

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGAN+RY++  R  I   PRFSPN+Q+V Y +++     +VYL+     +  + +GNF 
Sbjct: 197 QDGANVRYISDGR-AISLTPRFSPNRQEVTYMSFEGGS-PKVYLLQLETGQR-ELVGNFP 253

Query: 258 SMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            M +APRFS +G++ ++S +Q D + +IY++DL++ +T RLTN+  I+ SASYSPD SQI
Sbjct: 254 GMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRSTTRLTNSQAIDTSASYSPDGSQI 313

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDLIAFTK S  +F+IGVM
Sbjct: 314 VFSSDRGGRPQLYVMGADGSNPRRISAG-DGSYSTPVWSPRGDLIAFTKQSQGQFSIGVM 372

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++IDL GRNE  I TP +
Sbjct: 373 KTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFTIDLTGRNERQIQTPNF 432

Query: 437 ASDPQWVGFMD 447
           ASDP W   ++
Sbjct: 433 ASDPAWSPLLE 443


>gi|222149663|ref|YP_002550620.1| translocation protein TolB [Agrobacterium vitis S4]
 gi|254764836|sp|B9JRY0|TOLB_AGRVS RecName: Full=Protein tolB; Flags: Precursor
 gi|221736645|gb|ACM37608.1| periplasmic component of the Tol biopolymer transport system
           [Agrobacterium vitis S4]
          Length = 435

 Score =  406 bits (1043), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 211/433 (48%), Positives = 291/433 (67%), Gaps = 6/433 (1%)

Query: 17  LCLLLVLIG--GFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           L +L+VL+G  G F T   A V++  N  N  P+ IA   F+S + +G K+S VV  DL+
Sbjct: 7   LRILIVLVGMAGAFATPAMALVEININKGNVEPMPIAIPDFLSANGIGAKISAVVEADLK 66

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           RS +F  ++  +F  K  NPD  P  Q+W  L AQ LV GR+ +EG  RLR EFRLWD  
Sbjct: 67  RSGLFAPVNHGAFIDKQINPDQAPNMQNWTVLNAQALVVGRITQEGDGRLRAEFRLWDTY 126

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             +Q+ G++F++ P +WR++AH I+D IY+ ITGEKG F++RI+FV+ES      K  L 
Sbjct: 127 AGQQMSGQQFYTQPENWRRVAHIIADAIYERITGEKGYFDTRIVFVAESGTKTDRKRQLA 186

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD+DG N+R LT + + +L  PRFSPN+Q+V Y +++     RVYL+     +  + +G
Sbjct: 187 IMDQDGENVRMLTNTANLVL-TPRFSPNRQEVTYMSFEGNQP-RVYLLQLETGQR-EVVG 243

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           NF  M  +PRFS +G+R ++S+Q+D   +IY++DL+S  T RLT+T  I+ S SY+PD  
Sbjct: 244 NFPGMTFSPRFSPDGQRVIMSLQQDANSNIYTMDLRSRTTTRLTSTAAIDTSPSYAPDGR 303

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +IVFESDR G++QLYVM S+GS Q RIS   E SY  PVWSP+GDLIAFTK SG KF+IG
Sbjct: 304 RIVFESDRGGRQQLYVMNSDGSGQTRIS-FGEGSYSTPVWSPRGDLIAFTKQSGGKFSIG 362

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           VMK DGS ERLL    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE L+ TP
Sbjct: 363 VMKPDGSGERLLTTGFHNEGPTWAPNGRVLMFFRQAAGSGGPQLYSIDLTGYNEQLVKTP 422

Query: 435 AYASDPQWVGFMD 447
           ++ASDP W   ++
Sbjct: 423 SFASDPAWSPLLE 435


>gi|227823308|ref|YP_002827280.1| translocation protein TolB [Sinorhizobium fredii NGR234]
 gi|227342309|gb|ACP26527.1| TolB protein precursor [Sinorhizobium fredii NGR234]
          Length = 457

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 212/430 (49%), Positives = 293/430 (68%), Gaps = 5/430 (1%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
              LV  G  F    +A V++  N  N  P+ +A T F+   ELG K+S+VV+ DL+RS 
Sbjct: 33  LFTLVFAGVLFAAPANAVVEININKGNVEPLPVAITDFLQ-GELGQKISDVVAADLKRSG 91

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  I + +F +KI NPD+ PRF+DW  + AQ LVTGRV +EG  RL+ EFRLWD    +
Sbjct: 92  LFAPIDKGAFIEKIANPDAAPRFEDWKVINAQALVTGRVTQEGDGRLKAEFRLWDTFAGQ 151

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           Q++G++F++ P +WR++AH I+D IY+ ITGEKG F++RI++V+ES      K  L +MD
Sbjct: 152 QMLGQQFYTQPENWRRVAHIIADAIYERITGEKGYFDTRIVYVAESGPKNARKRQLAIMD 211

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DG N R LT S D I+  PRFSPN+Q++ Y +++++   RVYL+     +  + +GNF 
Sbjct: 212 QDGFNARALTNSND-IVLTPRFSPNRQEITYMSFENQQP-RVYLLQLETGQR-EVVGNFP 268

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            M  APRFS +G+R ++S+Q++   +IY++DL+S  T RLTNT  I+ S SYSPD ++IV
Sbjct: 269 GMTFAPRFSPDGQRVIMSLQQEGNANIYTMDLRSRTTTRLTNTNAIDTSPSYSPDGARIV 328

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           FESDR GK+QLYVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK SG KF+IGVMK
Sbjct: 329 FESDRGGKQQLYVMGADGSGQTRISFG-DGSYSTPVWSPRGDLIAFTKQSGGKFSIGVMK 387

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE  I T  +A
Sbjct: 388 PDGSGERILTTGFHNEGPTWAPNGRVLMFFRQNAGAGGPQLYSIDLTGYNEQQIQTQGFA 447

Query: 438 SDPQWVGFMD 447
           SDP W   M+
Sbjct: 448 SDPAWSPLME 457


>gi|222086973|ref|YP_002545507.1| Tol-Pal system beta propeller repeat protein TolB [Agrobacterium
           radiobacter K84]
 gi|221724421|gb|ACM27577.1| Tol-Pal system beta propeller repeat protein TolB [Agrobacterium
           radiobacter K84]
          Length = 441

 Score =  405 bits (1040), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 206/420 (49%), Positives = 294/420 (70%), Gaps = 5/420 (1%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSF 87
           + +  +A V++  N  N  P+ IA T  +S D LG ++S V++ DLQRS +F  I++ +F
Sbjct: 27  YASPAYAVVEININKGNVQPMPIAITDLLSNDGLGAQISGVIAADLQRSGLFAPINKQAF 86

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
            +KI+NPDS PRF DW S+ AQ LVTGRV ++G  RLR EFRLWD     Q+IG++F++ 
Sbjct: 87  IEKISNPDSTPRFPDWTSINAQALVTGRVTQDG-GRLRAEFRLWDTFGNSQMIGQQFYAQ 145

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           P +WR++AH I+D IY+ ITGEKG F++R++FV+ES      K  L +MD+DGAN+R LT
Sbjct: 146 PDNWRRVAHIIADAIYEKITGEKGYFDTRVVFVAESGPKTARKTQLAIMDQDGANVRMLT 205

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              D +L  PRFSP++Q+V Y ++ ++   RVYL+  +  +  + +GNF  M  +PRFS 
Sbjct: 206 NGSDLVL-TPRFSPSRQEVTYMSFANQQ-PRVYLLQLQTGQR-EIVGNFPGMTFSPRFSP 262

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+R ++S+Q++   +IY++DL+S  T RLT+T  I+ S SYSPD +Q+ FESDR GK+Q
Sbjct: 263 DGQRVIMSLQQEGNANIYTMDLRSRTTTRLTSTAAIDTSPSYSPDGTQVAFESDRGGKQQ 322

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +YVM ++GS+Q+RIS   + SY  PVWSP+GDLIAFTK SG  F+IGVMK DGS ERLL 
Sbjct: 323 IYVMNADGSNQRRISFG-DGSYSTPVWSPRGDLIAFTKQSGGSFSIGVMKTDGSGERLLT 381

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
              + + PTW+P+GR ++F R+  G +G +LYSIDL G NE  I TP +ASDP W   ++
Sbjct: 382 TGFHNEGPTWAPNGRVIMFFREPAGSSGPQLYSIDLTGYNEQKIPTPGFASDPAWSPLLE 441


>gi|306841416|ref|ZP_07474118.1| Tol-Pal system beta propeller repeat protein TolB [Brucella sp.
           BO2]
 gi|306844689|ref|ZP_07477274.1| Tol-Pal system beta propeller repeat protein TolB [Brucella sp.
           BO1]
 gi|306274861|gb|EFM56631.1| Tol-Pal system beta propeller repeat protein TolB [Brucella sp.
           BO1]
 gi|306288522|gb|EFM59874.1| Tol-Pal system beta propeller repeat protein TolB [Brucella sp.
           BO2]
          Length = 443

 Score =  402 bits (1032), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 199/426 (46%), Positives = 290/426 (68%), Gaps = 7/426 (1%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           C++   +    P    A V++  N     P+ IA T F+S D+LG  ++ V++ DL+RS 
Sbjct: 19  CMIAASLVCTMPA--RAVVEININKGVIEPLPIAITDFLSADQLGSNITSVIAADLERSG 76

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+   RL+ EFRLWD    +
Sbjct: 77  LFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPDGRLKAEFRLWDTFGGQ 136

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           Q+IG++FF++P +WR++AH I+D IY+ +TGEKG F++R++FV ES  +      L +MD
Sbjct: 137 QMIGQQFFTTPDNWRRVAHIIADAIYERLTGEKGYFDTRVVFVDESGPAQKRVKRLAIMD 196

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL+     +  + +GNF 
Sbjct: 197 QDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFEGGS-PKVYLLQLETGQR-ELVGNFP 253

Query: 258 SMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++  I+  ASYSPD SQI
Sbjct: 254 GMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSSQAIDTGASYSPDGSQI 313

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDLIAFTK S  +F+IGVM
Sbjct: 314 VFTSDRGGRPQLYVMGADGSNPRRISMG-DGSYSTPVWSPRGDLIAFTKQSQGQFSIGVM 372

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++IDL GRNE  I TP +
Sbjct: 373 KTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFTIDLTGRNERQIQTPNF 432

Query: 437 ASDPQW 442
           ASDP W
Sbjct: 433 ASDPAW 438


>gi|86359053|ref|YP_470945.1| translocation protein TolB [Rhizobium etli CFN 42]
 gi|119371054|sp|Q2K4L8|TOLB_RHIEC RecName: Full=Protein tolB; Flags: Precursor
 gi|86283155|gb|ABC92218.1| protein transporter protein [Rhizobium etli CFN 42]
          Length = 436

 Score =  401 bits (1030), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 208/440 (47%), Positives = 300/440 (68%), Gaps = 10/440 (2%)

Query: 13  MKINLCLLLVLIGGF-----FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
           +K +L   L+++ G      F T  +A V++  N  N  P+ IA T F+  D +G +VS+
Sbjct: 2   VKCSLIRALMVVAGLVGAAAFTTPANALVELNINKGNIQPLPIAVTDFLQGD-MGAQVSQ 60

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V++ DLQRS +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV +E   RLR E
Sbjct: 61  VIAADLQRSGLFAPINKTAFIEKISNPDAAPRFEDWKVINAQALVTGRVTQEADGRLRAE 120

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           FRLWD    +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES    
Sbjct: 121 FRLWDTFAGQQMTGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQ 180

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  L +MD+DG N+R LT   D +L  PRFSP++Q+V Y ++ ++   RVYL+     
Sbjct: 181 QRKRQLAIMDQDGFNVRTLTDGSDLVL-TPRFSPSRQEVTYMSFANQQP-RVYLLQLETG 238

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  + +GNF  M  +PRFS +G++ ++S+Q++   +IY++DL+S  T RLT+T  I+ S 
Sbjct: 239 QR-EVVGNFPGMTFSPRFSPDGQKVIMSLQQEGNSNIYTMDLRSRTTTRLTSTAAIDTSP 297

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SYSPD +++ FESDR GK Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK S
Sbjct: 298 SYSPDGARVSFESDRGGKPQIYVMNADGSGQTRIS-FGDGSYSTPVWSPRGDLIAFTKQS 356

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G KF+IGVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G N
Sbjct: 357 GGKFSIGVMKPDGSGERILTSGFHNEGPTWAPNGRVLMFFRQAAGAGGPQLYSIDLTGYN 416

Query: 428 ETLINTPAYASDPQWVGFMD 447
           E L+ TP+YASDP W   ++
Sbjct: 417 EQLVKTPSYASDPAWSPLLE 436


>gi|114706798|ref|ZP_01439698.1| translocation protein TolB precursor [Fulvimarina pelagi HTCC2506]
 gi|114537746|gb|EAU40870.1| translocation protein TolB precursor [Fulvimarina pelagi HTCC2506]
          Length = 441

 Score =  400 bits (1029), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 200/412 (48%), Positives = 280/412 (67%), Gaps = 4/412 (0%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
           +  A V +  +  N  P+ IA T F S D +G ++S VV  DL+RS +F  I + +F Q 
Sbjct: 29  TAQARVTIDISGGNVEPLPIAITDFQSQDGIGAQISSVVEADLKRSGLFAPIDKAAFIQT 88

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
              PD+ P FQDW  + AQ LV GRV +E   RLRVEFRLWD    +Q+ G++F++ P  
Sbjct: 89  GLTPDTSPSFQDWTVINAQALVVGRVAREADGRLRVEFRLWDTFAGQQMDGQQFYADPND 148

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           WR+IAH I+D +Y+ ITGE G F+SR++FVSES         L +MD+DGAN+RYLT  +
Sbjct: 149 WRRIAHIIADAVYKQITGENGYFDSRVVFVSESGNKANRVKRLAIMDQDGANLRYLTEGQ 208

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D +L  PRFSPN+Q++ Y ++ + +  RVYL+     +  + +GNF  M  +PRFS +G+
Sbjct: 209 DLVL-TPRFSPNRQEITYMSFGNGEP-RVYLLQLETGQR-EIVGNFPGMTFSPRFSPDGQ 265

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           + ++S+Q+D   +IY++DL+S AT+RLTNT  I+ S SYSPD  +IVFESDR G++QLY 
Sbjct: 266 KVVMSLQQDGNANIYAMDLRSRATQRLTNTAAIDTSPSYSPDGGRIVFESDRGGRQQLYT 325

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M ++GS+Q+RIS   + SY  PVWSP+GDLIAFTK SG +F IGVM+ DGS ER+L    
Sbjct: 326 MNADGSNQQRISF-GDGSYSTPVWSPRGDLIAFTKQSGGQFQIGVMRPDGSGERILTTGY 384

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           + + PTW+P+GR L+F R + G  G +L+SIDL+GRNE  + T  +ASDP W
Sbjct: 385 HNEGPTWAPNGRVLMFFRDQRGGGGPELWSIDLSGRNEQKVPTNGFASDPAW 436


>gi|62290569|ref|YP_222362.1| translocation protein TolB [Brucella abortus bv. 1 str. 9-941]
 gi|82700485|ref|YP_415059.1| translocation protein TolB [Brucella melitensis biovar Abortus
           2308]
 gi|189024787|ref|YP_001935555.1| translocation protein TolB [Brucella abortus S19]
 gi|225628265|ref|ZP_03786299.1| Tol-Pal system beta propeller repeat protein TolB [Brucella ceti
           str. Cudo]
 gi|225853152|ref|YP_002733385.1| translocation protein TolB [Brucella melitensis ATCC 23457]
 gi|237816074|ref|ZP_04595070.1| Tol-Pal system beta propeller repeat protein TolB [Brucella abortus
           str. 2308 A]
 gi|254689865|ref|ZP_05153119.1| translocation protein TolB [Brucella abortus bv. 6 str. 870]
 gi|254694358|ref|ZP_05156186.1| translocation protein TolB [Brucella abortus bv. 3 str. Tulya]
 gi|254698016|ref|ZP_05159844.1| translocation protein TolB [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700358|ref|ZP_05162186.1| translocation protein TolB [Brucella suis bv. 5 str. 513]
 gi|254730900|ref|ZP_05189478.1| translocation protein TolB [Brucella abortus bv. 4 str. 292]
 gi|256061734|ref|ZP_05451871.1| translocation protein TolB [Brucella neotomae 5K33]
 gi|256114265|ref|ZP_05455010.1| translocation protein TolB [Brucella melitensis bv. 3 str. Ether]
 gi|256160412|ref|ZP_05458101.1| translocation protein TolB [Brucella ceti M490/95/1]
 gi|256255618|ref|ZP_05461154.1| translocation protein TolB [Brucella ceti B1/94]
 gi|256258119|ref|ZP_05463655.1| translocation protein TolB [Brucella abortus bv. 9 str. C68]
 gi|256263356|ref|ZP_05465888.1| protein tolB [Brucella melitensis bv. 2 str. 63/9]
 gi|256370106|ref|YP_003107617.1| translocation protein TolB precursor [Brucella microti CCM 4915]
 gi|260167912|ref|ZP_05754723.1| translocation protein TolB [Brucella sp. F5/99]
 gi|260547187|ref|ZP_05822925.1| tolB [Brucella abortus NCTC 8038]
 gi|260755396|ref|ZP_05867744.1| protein tolB [Brucella abortus bv. 6 str. 870]
 gi|260758618|ref|ZP_05870966.1| protein tolB [Brucella abortus bv. 4 str. 292]
 gi|260762450|ref|ZP_05874787.1| protein tolB [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884412|ref|ZP_05896026.1| protein tolB [Brucella abortus bv. 9 str. C68]
 gi|261214667|ref|ZP_05928948.1| protein tolB [Brucella abortus bv. 3 str. Tulya]
 gi|261222821|ref|ZP_05937102.1| protein tolB [Brucella ceti B1/94]
 gi|261325738|ref|ZP_05964935.1| protein tolB [Brucella neotomae 5K33]
 gi|261750852|ref|ZP_05994561.1| protein tolB [Brucella suis bv. 5 str. 513]
 gi|261757350|ref|ZP_06001059.1| protein tolB [Brucella sp. F5/99]
 gi|265995569|ref|ZP_06108126.1| protein tolB [Brucella melitensis bv. 3 str. Ether]
 gi|265998780|ref|ZP_06111337.1| protein tolB [Brucella ceti M490/95/1]
 gi|294850948|ref|ZP_06791624.1| tol-Pal system beta propeller repeat protein TolB [Brucella sp.
           NVSL 07-0026]
 gi|297248968|ref|ZP_06932676.1| tol-Pal system beta propeller repeat protein TolB [Brucella abortus
           bv. 5 str. B3196]
 gi|75496344|sp|Q57BI3|TOLB_BRUAB RecName: Full=Protein tolB; Flags: Precursor
 gi|119371037|sp|Q2YRD7|TOLB_BRUA2 RecName: Full=Protein tolB; Flags: Precursor
 gi|226705866|sp|B2S7D4|TOLB_BRUA1 RecName: Full=Protein tolB; Flags: Precursor
 gi|254764838|sp|C0REV9|TOLB_BRUMB RecName: Full=Protein tolB; Flags: Precursor
 gi|62196701|gb|AAX75001.1| TolB, tolB protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616586|emb|CAJ11665.1| TolB, N-terminal [Brucella melitensis biovar Abortus 2308]
 gi|189020359|gb|ACD73081.1| TolB, N-terminal [Brucella abortus S19]
 gi|225616111|gb|EEH13159.1| Tol-Pal system beta propeller repeat protein TolB [Brucella ceti
           str. Cudo]
 gi|225641517|gb|ACO01431.1| Tol-Pal system beta propeller repeat protein TolB [Brucella
           melitensis ATCC 23457]
 gi|237788737|gb|EEP62949.1| Tol-Pal system beta propeller repeat protein TolB [Brucella abortus
           str. 2308 A]
 gi|256000269|gb|ACU48668.1| translocation protein TolB precursor [Brucella microti CCM 4915]
 gi|260095552|gb|EEW79430.1| tolB [Brucella abortus NCTC 8038]
 gi|260668936|gb|EEX55876.1| protein tolB [Brucella abortus bv. 4 str. 292]
 gi|260672876|gb|EEX59697.1| protein tolB [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675504|gb|EEX62325.1| protein tolB [Brucella abortus bv. 6 str. 870]
 gi|260873940|gb|EEX81009.1| protein tolB [Brucella abortus bv. 9 str. C68]
 gi|260916274|gb|EEX83135.1| protein tolB [Brucella abortus bv. 3 str. Tulya]
 gi|260921405|gb|EEX88058.1| protein tolB [Brucella ceti B1/94]
 gi|261301718|gb|EEY05215.1| protein tolB [Brucella neotomae 5K33]
 gi|261737334|gb|EEY25330.1| protein tolB [Brucella sp. F5/99]
 gi|261740605|gb|EEY28531.1| protein tolB [Brucella suis bv. 5 str. 513]
 gi|262553469|gb|EEZ09238.1| protein tolB [Brucella ceti M490/95/1]
 gi|262766853|gb|EEZ12471.1| protein tolB [Brucella melitensis bv. 3 str. Ether]
 gi|263093355|gb|EEZ17424.1| protein tolB [Brucella melitensis bv. 2 str. 63/9]
 gi|294821591|gb|EFG38587.1| tol-Pal system beta propeller repeat protein TolB [Brucella sp.
           NVSL 07-0026]
 gi|297174101|gb|EFH33458.1| tol-Pal system beta propeller repeat protein TolB [Brucella abortus
           bv. 5 str. B3196]
 gi|326409710|gb|ADZ66775.1| TolB, N-terminal protein [Brucella melitensis M28]
 gi|326539417|gb|ADZ87632.1| Tol-Pal system beta propeller repeat protein TolB [Brucella
           melitensis M5-90]
          Length = 443

 Score =  400 bits (1028), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/426 (46%), Positives = 290/426 (68%), Gaps = 7/426 (1%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           C++   +    P    A V++  N     P+ IA T F+S D+LG  ++ V++ DL+RS 
Sbjct: 19  CMIAASLVCTMPA--RAVVEININKGVIEPLPIAITDFLSADQLGSNITSVIAADLERSG 76

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+   RL+ EFRLWD    +
Sbjct: 77  LFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPDGRLKAEFRLWDTFGGQ 136

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV ES  +      L +MD
Sbjct: 137 QMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVDESGPAQKRVKRLAIMD 196

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL+     +  + +GNF 
Sbjct: 197 QDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFEGGS-PKVYLLQLETGQR-ELVGNFP 253

Query: 258 SMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++  I+  ASYSPD SQI
Sbjct: 254 GMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSSQAIDTGASYSPDGSQI 313

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDLIAFTK S  +F+IGVM
Sbjct: 314 VFTSDRGGRPQLYVMGADGSNPRRISMG-DGSYSTPVWSPRGDLIAFTKQSQGQFSIGVM 372

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++IDL GRNE  I TP +
Sbjct: 373 KTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFTIDLTGRNERQIQTPNF 432

Query: 437 ASDPQW 442
           ASDP W
Sbjct: 433 ASDPAW 438


>gi|17986622|ref|NP_539256.1| translocation protein TolB [Brucella melitensis bv. 1 str. 16M]
 gi|256045307|ref|ZP_05448201.1| translocation protein TolB [Brucella melitensis bv. 1 str. Rev.1]
 gi|260565802|ref|ZP_05836285.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|265991732|ref|ZP_06104289.1| protein tolB [Brucella melitensis bv. 1 str. Rev.1]
 gi|32699715|sp|Q93TG4|TOLB_BRUME RecName: Full=Protein tolB; Flags: Precursor
 gi|13898976|gb|AAK48918.1|AF358662_5 TolB protein [Brucella melitensis]
 gi|17982236|gb|AAL51520.1| tolb protein [Brucella melitensis bv. 1 str. 16M]
 gi|260151175|gb|EEW86270.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|263002688|gb|EEZ15091.1| protein tolB [Brucella melitensis bv. 1 str. Rev.1]
          Length = 443

 Score =  400 bits (1027), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/426 (46%), Positives = 289/426 (67%), Gaps = 7/426 (1%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           C++   +    P    A V++  N     P+ IA T F+S D+LG  ++ V++ DL+RS 
Sbjct: 19  CMIAASLVCTMPA--RAVVEININKGVIEPLPIAITDFLSADQLGSNITSVIAADLERSG 76

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  I   +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+   RL+ EFRLWD    +
Sbjct: 77  LFAPIDTGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPDGRLKAEFRLWDTFGGQ 136

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV ES  +      L +MD
Sbjct: 137 QMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVDESGPAQKRVKRLAIMD 196

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL+     +  + +GNF 
Sbjct: 197 QDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFEGGS-PKVYLLQLETGQR-ELVGNFP 253

Query: 258 SMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++  I+  ASYSPD SQI
Sbjct: 254 GMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSSQAIDTGASYSPDGSQI 313

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDLIAFTK S  +F+IGVM
Sbjct: 314 VFTSDRGGRPQLYVMGADGSNPRRISMG-DGSYSTPVWSPRGDLIAFTKQSQGQFSIGVM 372

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++IDL GRNE  I TP +
Sbjct: 373 KTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFTIDLTGRNERQIQTPNF 432

Query: 437 ASDPQW 442
           ASDP W
Sbjct: 433 ASDPAW 438


>gi|254719700|ref|ZP_05181511.1| translocation protein TolB [Brucella sp. 83/13]
 gi|265984714|ref|ZP_06097449.1| tolB [Brucella sp. 83/13]
 gi|306837841|ref|ZP_07470703.1| Tol-Pal system beta propeller repeat protein TolB [Brucella sp. NF
           2653]
 gi|264663306|gb|EEZ33567.1| tolB [Brucella sp. 83/13]
 gi|306407080|gb|EFM63297.1| Tol-Pal system beta propeller repeat protein TolB [Brucella sp. NF
           2653]
          Length = 443

 Score =  399 bits (1026), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/426 (46%), Positives = 289/426 (67%), Gaps = 7/426 (1%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           C++   +    P    A V++  N     P+ IA T F+S D+LG  ++ V++ DL+RS 
Sbjct: 19  CMIAASLVCTMPA--RAVVEININKGVIEPLPIAITDFLSADQLGSNITSVIAADLERSG 76

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+   RL+ EFRLWD    +
Sbjct: 77  LFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPDGRLKAEFRLWDTFGGQ 136

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           Q+IG++FF++P +WR++AH I+D IY+ +TGEKG F++R++FV ES  +      L +MD
Sbjct: 137 QMIGQQFFTTPDNWRRVAHIIADAIYERLTGEKGYFDTRVVFVDESGPAQKRVKRLAIMD 196

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGAN+ +++  R  +   PRFSPN+Q+V Y +++     +VYL+     +  + +GNF 
Sbjct: 197 QDGANVSFISDGR-ALSLTPRFSPNRQEVTYMSFEGGS-PKVYLLQLETGQR-ELVGNFP 253

Query: 258 SMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++  I+  ASYSPD SQI
Sbjct: 254 GMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSSQAIDTGASYSPDGSQI 313

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDLIAFTK S  +F+IGVM
Sbjct: 314 VFTSDRGGRPQLYVMGADGSNPRRISMG-DGSYSTPVWSPRGDLIAFTKQSQGQFSIGVM 372

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++IDL GRNE  I TP +
Sbjct: 373 KTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFTIDLTGRNERQIQTPNF 432

Query: 437 ASDPQW 442
           ASDP W
Sbjct: 433 ASDPAW 438


>gi|148560006|ref|YP_001259549.1| translocation protein TolB [Brucella ovis ATCC 25840]
 gi|166229975|sp|A5VS52|TOLB_BRUO2 RecName: Full=Protein tolB; Flags: Precursor
 gi|148371263|gb|ABQ61242.1| Tol-Pal system beta propeller repeat protein TolB [Brucella ovis
           ATCC 25840]
          Length = 443

 Score =  399 bits (1025), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 198/426 (46%), Positives = 289/426 (67%), Gaps = 7/426 (1%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           C++   +    P    A V++  N     P+ IA T F+S D+LG  ++ V++ DL+RS 
Sbjct: 19  CMIAASLVCTMPA--RAVVEININKGVIEPLPIAITDFLSADQLGSNITSVIAADLERSG 76

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+   RL+ EFRLWD    +
Sbjct: 77  LFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPDGRLKAEFRLWDTFGGQ 136

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV ES  +      L +MD
Sbjct: 137 QMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVDESGPAQKRVKRLAIMD 196

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGAN+R+++  R  +   PRFSPN Q+V Y +++     +VYL+     +  + +GNF 
Sbjct: 197 QDGANVRFISDGR-ALSLTPRFSPNWQEVTYMSFEGGS-PKVYLLQLETGQR-ELVGNFP 253

Query: 258 SMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++  I+  ASYSPD SQI
Sbjct: 254 GMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSSQAIDTGASYSPDGSQI 313

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDLIAFTK S  +F+IGVM
Sbjct: 314 VFTSDRGGRPQLYVMGADGSNPRRISMG-DGSYSTPVWSPRGDLIAFTKQSQGQFSIGVM 372

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++IDL GRNE  I TP +
Sbjct: 373 KTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFTIDLTGRNERQIQTPNF 432

Query: 437 ASDPQW 442
           ASDP W
Sbjct: 433 ASDPAW 438


>gi|254708436|ref|ZP_05170264.1| translocation protein TolB [Brucella pinnipedialis M163/99/10]
 gi|254708711|ref|ZP_05170522.1| translocation protein TolB [Brucella pinnipedialis B2/94]
 gi|256030237|ref|ZP_05443851.1| translocation protein TolB [Brucella pinnipedialis M292/94/1]
 gi|261315936|ref|ZP_05955133.1| translocation protein TolB [Brucella pinnipedialis M163/99/10]
 gi|261316202|ref|ZP_05955399.1| tolB [Brucella pinnipedialis B2/94]
 gi|265987265|ref|ZP_06099822.1| protein tolB [Brucella pinnipedialis M292/94/1]
 gi|261295425|gb|EEX98921.1| tolB [Brucella pinnipedialis B2/94]
 gi|261304962|gb|EEY08459.1| translocation protein TolB [Brucella pinnipedialis M163/99/10]
 gi|264659462|gb|EEZ29723.1| protein tolB [Brucella pinnipedialis M292/94/1]
          Length = 443

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/426 (46%), Positives = 289/426 (67%), Gaps = 7/426 (1%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           C++   +    P    A V++  N     P+ IA T F+S D+LG  ++  ++ DL+RS 
Sbjct: 19  CMIAASLVCTMPA--RAVVEININKGVIEPLPIAITDFLSADQLGSNITSAIAADLERSG 76

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+   RL+ EFRLWD    +
Sbjct: 77  LFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPDGRLKAEFRLWDTFGGQ 136

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV ES  +      L +MD
Sbjct: 137 QMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVDESGPAQKRVKRLAIMD 196

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL+     +  + +GNF 
Sbjct: 197 QDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFEGGS-PKVYLLQLETGQR-ELVGNFP 253

Query: 258 SMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++  I+  ASYSPD SQI
Sbjct: 254 GMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSSQAIDTGASYSPDGSQI 313

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDLIAFTK S  +F+IGVM
Sbjct: 314 VFTSDRGGRPQLYVMGADGSNPRRISMG-DGSYSTPVWSPRGDLIAFTKQSQGQFSIGVM 372

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++IDL GRNE  I TP +
Sbjct: 373 KTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFTIDLTGRNERQIQTPNF 432

Query: 437 ASDPQW 442
           ASDP W
Sbjct: 433 ASDPAW 438


>gi|254714558|ref|ZP_05176369.1| translocation protein TolB [Brucella ceti M644/93/1]
 gi|254717455|ref|ZP_05179266.1| translocation protein TolB [Brucella ceti M13/05/1]
 gi|261219286|ref|ZP_05933567.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261322347|ref|ZP_05961544.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|260924375|gb|EEX90943.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261295037|gb|EEX98533.1| conserved hypothetical protein [Brucella ceti M644/93/1]
          Length = 443

 Score =  399 bits (1024), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/426 (46%), Positives = 290/426 (68%), Gaps = 7/426 (1%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           C++   +    P    A V++  N     P+ IA T F+S D+LG  ++ V++ DL+RS 
Sbjct: 19  CMIAASLVCTMPA--RAVVEININKGVIEPLPIAITDFLSADQLGSNITSVIAADLERSG 76

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+   RL+ EFRLWD    +
Sbjct: 77  LFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPDGRLKAEFRLWDTFGGQ 136

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV ES  +      L +MD
Sbjct: 137 QMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVDESGPAQKRVKRLAIMD 196

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL+     +  + +GNF 
Sbjct: 197 QDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFEGGS-PKVYLLQLETGQR-ELVGNFP 253

Query: 258 SMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++  I+  ASYSP+ SQI
Sbjct: 254 GMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSSQAIDTGASYSPNGSQI 313

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDLIAFTK S  +F+IGVM
Sbjct: 314 VFTSDRGGRPQLYVMGADGSNPRRISMG-DGSYSTPVWSPRGDLIAFTKQSQGQFSIGVM 372

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++IDL GRNE  I TP +
Sbjct: 373 KTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFTIDLTGRNERQIQTPNF 432

Query: 437 ASDPQW 442
           ASDP W
Sbjct: 433 ASDPAW 438


>gi|209550776|ref|YP_002282693.1| translocation protein TolB [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|226705889|sp|B5ZNL9|TOLB_RHILW RecName: Full=Protein tolB; Flags: Precursor
 gi|209536532|gb|ACI56467.1| Tol-Pal system beta propeller repeat protein TolB [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 435

 Score =  398 bits (1023), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/440 (47%), Positives = 296/440 (67%), Gaps = 11/440 (2%)

Query: 13  MKINLCLLLVLIGGF-----FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
           +K +L   L++I G      F T  +A V +     N  P+ IA T F    +LG +VS+
Sbjct: 2   VKCSLIRALMVIAGLIGAAAFTTPANALVTLDLRKGNVQPMPIAVTDFQG--DLGAQVSQ 59

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V++ DLQRS +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV KE   RLR E
Sbjct: 60  VIAADLQRSGLFAPINKTAFIEKISNPDAAPRFEDWKVINAQALVTGRVTKEADGRLRAE 119

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           FRLWD    +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES    
Sbjct: 120 FRLWDPFAGQQMTGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQ 179

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  L +MD+DG N+R LT   D +L  PRFSP++Q+V Y ++ ++   RVYL+     
Sbjct: 180 QRKRQLAIMDQDGFNVRMLTDGSDLVL-TPRFSPSRQEVTYMSFANQQP-RVYLLQLETG 237

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  + +GNF  M  +PRFS +G++ ++S+Q+D   +IY++DL+S  T RLT+T  I+ S 
Sbjct: 238 QR-EVVGNFPGMTFSPRFSPDGQKVIMSLQQDANSNIYTMDLRSRTTTRLTSTAAIDTSP 296

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SYSPD +++ FESDR GK Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK +
Sbjct: 297 SYSPDGARVSFESDRGGKPQIYVMNADGSGQTRIS-FGDGSYSTPVWSPRGDLIAFTKQA 355

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G KF+IGVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G N
Sbjct: 356 GGKFSIGVMKPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQAAGAGGPQLYSIDLTGYN 415

Query: 428 ETLINTPAYASDPQWVGFMD 447
           E L+ TP+Y SDP W   M+
Sbjct: 416 EQLVKTPSYGSDPAWSPLME 435


>gi|23502555|ref|NP_698682.1| translocation protein TolB [Brucella suis 1330]
 gi|32699703|sp|Q8FZ07|TOLB_BRUSU RecName: Full=Protein tolB; Flags: Precursor
 gi|23348555|gb|AAN30597.1| tolB protein [Brucella suis 1330]
          Length = 443

 Score =  398 bits (1023), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 197/426 (46%), Positives = 289/426 (67%), Gaps = 7/426 (1%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           C++   +    P    A V++  N     P+ IA T F+S D+LG  ++ V++ DL+RS 
Sbjct: 19  CMIAASLVCTMPA--RAVVEININKGVIEPLPIAITDFLSADQLGSNITSVIAADLERSG 76

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+   RL+ EF LWD    +
Sbjct: 77  LFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPDGRLKAEFHLWDTFGGQ 136

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV ES  +      L +MD
Sbjct: 137 QMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVDESGPAQKRVKRLAIMD 196

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL+     +  + +GNF 
Sbjct: 197 QDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFEGGS-PKVYLLQLETGQR-ELVGNFP 253

Query: 258 SMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++  I+  ASYSPD SQI
Sbjct: 254 GMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSSQAIDTGASYSPDGSQI 313

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDLIAFTK S  +F+IGVM
Sbjct: 314 VFTSDRGGRPQLYVMGADGSNPRRISMG-DGSYSTPVWSPRGDLIAFTKQSQGQFSIGVM 372

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++IDL GRNE  I TP +
Sbjct: 373 KTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFTIDLTGRNERQIQTPNF 432

Query: 437 ASDPQW 442
           ASDP W
Sbjct: 433 ASDPAW 438


>gi|254703475|ref|ZP_05165303.1| translocation protein TolB [Brucella suis bv. 3 str. 686]
 gi|261754105|ref|ZP_05997814.1| protein tolB [Brucella suis bv. 3 str. 686]
 gi|261743858|gb|EEY31784.1| protein tolB [Brucella suis bv. 3 str. 686]
          Length = 443

 Score =  397 bits (1021), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 197/426 (46%), Positives = 288/426 (67%), Gaps = 7/426 (1%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           C++   +    P    A V++  N     P+ IA T F+S D+LG  ++ V++ DL+RS 
Sbjct: 19  CMIAASLVCTMPA--RAVVEININKGVIEPLPIAITDFLSADQLGSNITSVIAADLERSG 76

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+   RL+ EF LWD    +
Sbjct: 77  LFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPDGRLKAEFHLWDTFGGQ 136

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV ES  +      L +MD
Sbjct: 137 QMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVDESGPAQKRVKRLAIMD 196

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL+     +  + +GNF 
Sbjct: 197 QDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFEGGS-PKVYLLQLETGQR-ELVGNFP 253

Query: 258 SMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT+   I+  ASYSPD SQI
Sbjct: 254 GMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSNQAIDTGASYSPDGSQI 313

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDLIAFTK S  +F+IGVM
Sbjct: 314 VFTSDRGGRPQLYVMGADGSNPRRISMG-DGSYSTPVWSPRGDLIAFTKQSQGQFSIGVM 372

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++IDL GRNE  I TP +
Sbjct: 373 KTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFTIDLTGRNERQIQTPNF 432

Query: 437 ASDPQW 442
           ASDP W
Sbjct: 433 ASDPAW 438


>gi|161619626|ref|YP_001593513.1| translocation protein TolB [Brucella canis ATCC 23365]
 gi|260568782|ref|ZP_05839250.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|189035979|sp|A9M7J5|TOLB_BRUC2 RecName: Full=Protein tolB; Flags: Precursor
 gi|161336437|gb|ABX62742.1| Tol-Pal system beta propeller repeat protein TolB [Brucella canis
           ATCC 23365]
 gi|260154166|gb|EEW89248.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
          Length = 443

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/426 (46%), Positives = 289/426 (67%), Gaps = 7/426 (1%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           C++   +    P    A V++  N     P+ IA T F+S D+LG  ++ V++ DL+RS 
Sbjct: 19  CMIAASLVCTMPA--RAVVEININKGVIEPLPIAITDFLSADQLGSNITSVIAADLERSG 76

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+   RL+ EF LWD    +
Sbjct: 77  LFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPDGRLKAEFHLWDTFGGQ 136

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           ++IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV ES  +      L +MD
Sbjct: 137 RMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVDESGPAQKRVKRLAIMD 196

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL+     +  + +GNF 
Sbjct: 197 QDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFEGGS-PKVYLLQLETGQR-ELVGNFP 253

Query: 258 SMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++  I+  ASYSPD SQI
Sbjct: 254 GMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSSQAIDTGASYSPDGSQI 313

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDLIAFTK S  +F+IGVM
Sbjct: 314 VFTSDRGGRPQLYVMGADGSNPRRISMG-DGSYSTPVWSPRGDLIAFTKQSQGQFSIGVM 372

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++IDL GRNE  I TP +
Sbjct: 373 KTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFTIDLTGRNERQIQTPNF 432

Query: 437 ASDPQW 442
           ASDP W
Sbjct: 433 ASDPAW 438


>gi|327193466|gb|EGE60362.1| translocation protein TolB [Rhizobium etli CNPAF512]
          Length = 443

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 207/435 (47%), Positives = 295/435 (67%), Gaps = 10/435 (2%)

Query: 13  MKINLCLLLVLIGGF-----FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
           +K +L   L++I G      F T  +A V +     N  P+ IA T F+  D +G +VS+
Sbjct: 9   VKCSLIRALMVIAGLIGAAAFTTPANALVTLDLRKGNVQPMPIAVTDFLQGD-MGAQVSQ 67

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V++ DLQRS +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV +E   RLR E
Sbjct: 68  VIAADLQRSGLFAPINKSAFIEKISNPDASPRFEDWKVINAQALVTGRVTQEADGRLRAE 127

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           FRLWD    +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES    
Sbjct: 128 FRLWDPFAGQQMTGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQ 187

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  L +MD+DG N+R LT   D +L  PRFSPN+Q+V Y ++ ++   RVYL+     
Sbjct: 188 QRKRQLAIMDQDGFNVRMLTDGSDLVL-TPRFSPNRQEVTYMSFANQQP-RVYLLQLETG 245

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  + +GNF  M  +PRFS +G++ ++S+Q++   +IY++DL+S  T RLT+T  I+ S 
Sbjct: 246 QR-EVVGNFPGMTFSPRFSPDGQKVIMSLQQEGNSNIYTMDLRSRTTTRLTSTAAIDTSP 304

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SYSPD +++ FESDR GK Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK +
Sbjct: 305 SYSPDGARVSFESDRGGKPQIYVMNADGSGQTRIS-FGDGSYSTPVWSPRGDLIAFTKQA 363

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G KF+IGVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G N
Sbjct: 364 GGKFSIGVMKPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQAAGAGGPQLYSIDLTGYN 423

Query: 428 ETLINTPAYASDPQW 442
           E L+ TP+Y SDP W
Sbjct: 424 EQLVKTPSYGSDPAW 438


>gi|163845276|ref|YP_001622931.1| translocation protein TolB [Brucella suis ATCC 23445]
 gi|189035980|sp|A9WWH3|TOLB_BRUSI RecName: Full=Protein tolB; Flags: Precursor
 gi|163675999|gb|ABY40109.1| Tol-Pal system beta propeller repeat protein TolB [Brucella suis
           ATCC 23445]
          Length = 443

 Score =  395 bits (1016), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 196/431 (45%), Positives = 290/431 (67%), Gaps = 7/431 (1%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           C++   +    P    A V++  N     P+ IA T F+S D+LG  ++ V++ DL+RS 
Sbjct: 19  CMIAASLVCTMPA--RAVVEININKGVIEPLPIAITDFLSADQLGSNITSVIAADLERSG 76

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+   RL+ EF LWD    +
Sbjct: 77  LFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPDGRLKAEFHLWDTFGGQ 136

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV ES  +      L +MD
Sbjct: 137 QMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVDESGPAQKRVKRLAIMD 196

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL+     +  + +GNF 
Sbjct: 197 QDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFEGGS-PKVYLLQLETGQR-ELVGNFP 253

Query: 258 SMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++  I+  ASYSPD SQI
Sbjct: 254 GMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSSQAIDTGASYSPDGSQI 313

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDLIAFTK S  +F+IGV 
Sbjct: 314 VFTSDRGGRPQLYVMGADGSNPRRISMG-DGSYSTPVWSPRGDLIAFTKQSQGQFSIGVT 372

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++IDL GRNE  I TP +
Sbjct: 373 KTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFTIDLTGRNERQIQTPNF 432

Query: 437 ASDPQWVGFMD 447
           ASDP W   ++
Sbjct: 433 ASDPAWSPLLE 443


>gi|241206184|ref|YP_002977280.1| translocation protein TolB [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860074|gb|ACS57741.1| Tol-Pal system beta propeller repeat protein TolB [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 435

 Score =  395 bits (1015), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 204/431 (47%), Positives = 290/431 (67%), Gaps = 6/431 (1%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L  + ++    F T  +A V +     N  P+ IA T F    ++G +VS+V++ DLQRS
Sbjct: 11  LVAVGLMTAAVFATPANALVTLDIRKGNVQPMPIAVTDFQG--DMGAQVSQVIAADLQRS 68

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
            +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV KE   RLR EFRLWD    
Sbjct: 69  GLFAPINKTAFIEKISNPDASPRFEDWKVINAQALVTGRVTKEADGRLRAEFRLWDPFAG 128

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES      K  L +M
Sbjct: 129 QQMTGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQQRKRQLAIM 188

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DG N+R LT   D +L  PRFSP++Q+V Y ++ ++   RVYL+     +  + +GNF
Sbjct: 189 DQDGFNVRMLTDGSDLVL-TPRFSPSRQEVTYMSFANQQP-RVYLLQLETGQR-EVVGNF 245

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             M  +PRFS +G++ ++S+Q+D   +IY++DL+S  T RLT+T  I+ S SYSPD +++
Sbjct: 246 PGMTFSPRFSPDGQKVIMSLQQDANSNIYTMDLRSRTTTRLTSTAAIDTSPSYSPDGARV 305

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            FESDR GK Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK +G KF+IGVM
Sbjct: 306 SFESDRGGKPQIYVMNADGSGQTRIS-FGDGSYSTPVWSPRGDLIAFTKQAGGKFSIGVM 364

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE L+ TP Y
Sbjct: 365 KPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQAAGSGGPQLYSIDLTGYNEQLVKTPTY 424

Query: 437 ASDPQWVGFMD 447
            SDP W   M+
Sbjct: 425 GSDPAWSPLME 435


>gi|116253709|ref|YP_769547.1| translocation protein TolB [Rhizobium leguminosarum bv. viciae
           3841]
 gi|119371055|sp|Q1MC72|TOLB_RHIL3 RecName: Full=Protein tolB; Flags: Precursor
 gi|115258357|emb|CAK09459.1| putative TolB family protein uptake component [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 435

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 204/431 (47%), Positives = 290/431 (67%), Gaps = 6/431 (1%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L  + ++    F T  +A V +     N  P+ IA T F    ++G +VS+V++ DLQRS
Sbjct: 11  LVAVGLMTAAVFATPANALVTLDIRKGNVQPMPIAVTDFQG--DIGAQVSQVIAADLQRS 68

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
            +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV KE   RLR EFRLWD    
Sbjct: 69  GLFAPINKTAFIEKISNPDAAPRFEDWKVINAQALVTGRVSKEADGRLRAEFRLWDPFAG 128

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES      K  L +M
Sbjct: 129 QQMTGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQQRKRQLAIM 188

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DG N+R LT   D +L  PRFSP++Q+V Y ++ ++   RVYL+     +  + +GNF
Sbjct: 189 DQDGFNVRMLTDGSDLVL-TPRFSPSRQEVTYMSFANQQ-PRVYLLQLETGQR-EVVGNF 245

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             M  +PRFS +G++ ++S+Q+D   +IY++DL+S  T RLT+T  I+ S SYSPD +++
Sbjct: 246 PGMTFSPRFSPDGQKVIMSLQQDANSNIYTMDLRSRTTTRLTSTAAIDTSPSYSPDGARV 305

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            FESDR GK Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK +G KF+IGVM
Sbjct: 306 SFESDRGGKPQIYVMNADGSGQTRIS-FGDGSYSTPVWSPRGDLIAFTKQAGGKFSIGVM 364

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE L+ TP Y
Sbjct: 365 KPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQAAGSGGPQLYSIDLTGYNEQLVKTPTY 424

Query: 437 ASDPQWVGFMD 447
            SDP W   M+
Sbjct: 425 GSDPAWSPLME 435


>gi|190893275|ref|YP_001979817.1| protein transporter uptake component protein [Rhizobium etli CIAT
           652]
 gi|226705888|sp|B3PYX5|TOLB_RHIE6 RecName: Full=Protein tolB; Flags: Precursor
 gi|190698554|gb|ACE92639.1| protein transporter, uptake component protein [Rhizobium etli CIAT
           652]
          Length = 436

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/426 (47%), Positives = 289/426 (67%), Gaps = 5/426 (1%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L  + ++      T  +A V +     N  P+ IA T F+  D +G +VS+V++ DLQRS
Sbjct: 11  LVAVGLMAAAVVATPANALVTLDIRKGNVQPMPIAITDFLQGD-MGAQVSQVIAADLQRS 69

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
            +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV +E   RLR EFRLWD    
Sbjct: 70  GLFAPINKSAFIEKISNPDASPRFEDWKVINAQALVTGRVTQEADGRLRAEFRLWDPFAG 129

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES      K  L +M
Sbjct: 130 QQMTGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQQRKRQLAIM 189

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DG N+R LT   D +L  PRFSPN+Q+V Y ++ ++   RVYL+     +  + +GNF
Sbjct: 190 DQDGFNVRMLTDGSDLVL-TPRFSPNRQEVTYMSFANQQP-RVYLLQLETGQR-EVVGNF 246

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             M  +PRFS +G++ ++S+Q++   +IY++DL+S  T RLT+T  I+ S SYSPD +++
Sbjct: 247 PGMTFSPRFSPDGQKVIMSLQQEGNSNIYTMDLRSRTTTRLTSTAAIDTSPSYSPDGARV 306

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            FESDR GK Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK +G KF+IGVM
Sbjct: 307 SFESDRGGKPQIYVMNADGSGQTRIS-FGDGSYSTPVWSPRGDLIAFTKQAGGKFSIGVM 365

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE L+ TP+Y
Sbjct: 366 KPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQAAGAGGPQLYSIDLTGYNEQLVKTPSY 425

Query: 437 ASDPQW 442
            SDP W
Sbjct: 426 GSDPAW 431


>gi|218510315|ref|ZP_03508193.1| translocation protein TolB [Rhizobium etli Brasil 5]
          Length = 436

 Score =  392 bits (1007), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 202/426 (47%), Positives = 289/426 (67%), Gaps = 5/426 (1%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L  + ++      T  +A V +     N  P+ IA T F+  D +G +VS+V++ DLQRS
Sbjct: 11  LVAVGLMAAAVVATPANALVTLDIRKGNVQPMPIAVTDFLQGD-MGAQVSQVIAADLQRS 69

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
            +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV +E   RLR EFRLWD    
Sbjct: 70  GLFAPINKSAFIEKISNPDASPRFEDWKVINAQALVTGRVTQEADGRLRAEFRLWDPFAG 129

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES      K  L +M
Sbjct: 130 QQMTGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQQRKRQLAIM 189

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DG N+R LT   D +L  PRFSPN+Q+V Y ++ ++   RVYL+     +  + +GNF
Sbjct: 190 DQDGFNVRMLTDGSDLVL-TPRFSPNRQEVTYMSFANQQP-RVYLLQLETGQR-EVVGNF 246

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             M  +PRFS +G++ ++S+Q++   +IY++DL+S  T RLT+T  I+ S SYSPD +++
Sbjct: 247 PGMTFSPRFSPDGQKVIMSLQQEGNSNIYTMDLRSRTTTRLTSTAAIDTSPSYSPDGARV 306

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            FESDR GK Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK +G KF+IGVM
Sbjct: 307 SFESDRGGKPQIYVMNADGSGQTRIS-FGDGSYSTPVWSPRGDLIAFTKQAGGKFSIGVM 365

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE L+ TP+Y
Sbjct: 366 KPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQAAGAGGPQLYSIDLTGYNEQLVKTPSY 425

Query: 437 ASDPQW 442
            SDP W
Sbjct: 426 GSDPAW 431


>gi|90418976|ref|ZP_01226887.1| tolB protein, periplasmic component, biopolymer transport system
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90337056|gb|EAS50761.1| tolB protein, periplasmic component, biopolymer transport system
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 436

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/407 (48%), Positives = 278/407 (68%), Gaps = 4/407 (0%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           V++     N  P+ IA T F S D +G ++S+VV  DL+RS +F  I + +F Q     D
Sbjct: 29  VEIDVTQGNVEPLPIAITDFQSADGIGKQISDVVQADLKRSGLFAPIDRAAFIQSGLTTD 88

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
           + P F+DW  + AQ LV GRV  E   RLRVEFRLWD    +Q+ G++F+++P +WR++A
Sbjct: 89  TTPSFKDWTVINAQALVVGRVSPEADGRLRVEFRLWDTFAGQQLDGQQFYTNPENWRRVA 148

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H I+D IY+ +TGEKG F++RI+FV+ES         L +MD+DGAN+RYLT   + +L 
Sbjct: 149 HIIADAIYERLTGEKGYFDTRIVFVAESGTKDKRVKRLAIMDQDGANLRYLTDGSELVL- 207

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            PRFSP++Q+V Y ++ + +  RVYL+     +  + +GNF  M  +PRFS +G++ ++S
Sbjct: 208 TPRFSPSRQEVTYMSFGNGE-PRVYLLQLETGQR-EIVGNFPGMTFSPRFSPDGQKVIMS 265

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +Q++   +IY++DL+S AT RLT+T  I+ S SYSPD  +IVFESDR G++QLYVM ++G
Sbjct: 266 LQQEGNANIYAMDLRSRATTRLTSTTAIDTSPSYSPDGRRIVFESDRGGRQQLYVMGADG 325

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           S Q+RIS   + SY  PVWSP+GDLIAFTK SG +F IGVM+ DGS ER+L    + + P
Sbjct: 326 SGQQRISF-GDGSYSTPVWSPRGDLIAFTKQSGGQFQIGVMRPDGSGERILTSGFHNEGP 384

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           TW+P+GR ++F R + G  G +LYSIDL G NE  I TP+YASDP W
Sbjct: 385 TWAPNGRVVMFFRDQRGGGGPQLYSIDLTGYNEQKIPTPSYASDPAW 431


>gi|218662997|ref|ZP_03518927.1| translocation protein TolB [Rhizobium etli IE4771]
          Length = 437

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 202/421 (47%), Positives = 286/421 (67%), Gaps = 6/421 (1%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLIS-QDS 86
           F T  +A V++  N  N  P+ IA T F+    +G +VS+V++ DLQRS +F   S +  
Sbjct: 22  FATPANALVEININKGNVQPLPIAVTDFLQ-GNMGAQVSQVIAADLQRSGLFCARSTRQP 80

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS 146
           F +KI+NPD+ PRF+DW  + AQ LVTGRV +E   RLR EFRLWD    +Q+ G++F++
Sbjct: 81  FIEKISNPDASPRFEDWKVINAQALVTGRVTQEADGRLRAEFRLWDTFAGQQMTGQQFYT 140

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
            P +WR++AH I+D IY+ ITGE+G F++R++FVSES      K  L +MD+DG N+R L
Sbjct: 141 QPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQQRKRQLAIMDQDGFNVRML 200

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T   D +L  PRFSP++Q+V Y ++ ++   RVYL+     +  + +GNF  M  +PRFS
Sbjct: 201 TDGSDLVL-TPRFSPSRQEVTYMSFANQQ-PRVYLLQLETGQR-EVVGNFPGMTFSPRFS 257

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G++ ++S+Q++   +IY++DL+S  T RLT+T  I+ S SYSPD +++ FESDR GK 
Sbjct: 258 PDGQKVIMSLQQEGNSNIYTMDLRSRTTTRLTSTAAIDTSPSYSPDGARVSFESDRGGKP 317

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK SG KF+IGVMK DGS ER+L
Sbjct: 318 QIYVMDADGSGQTRIS-FGDGSYSTPVWSPRGDLIAFTKQSGGKFSIGVMKPDGSGERIL 376

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
               + + PTW+P+GR L+F R+  G  G +LYSIDL G NE L+ TP Y SDP W   +
Sbjct: 377 TTGFHNEGPTWAPNGRVLMFFRQAAGSGGPQLYSIDLTGYNEQLVKTPTYGSDPAWSPLL 436

Query: 447 D 447
           +
Sbjct: 437 E 437


>gi|13473330|ref|NP_104897.1| translocation protein TolB [Mesorhizobium loti MAFF303099]
 gi|32699716|sp|Q98F84|TOLB_RHILO RecName: Full=Protein tolB; Flags: Precursor
 gi|14024079|dbj|BAB50683.1| TolB protein precursor [Mesorhizobium loti MAFF303099]
          Length = 436

 Score =  387 bits (993), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 194/429 (45%), Positives = 283/429 (65%), Gaps = 7/429 (1%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           + +  + + +    P    A V++  N  N  P+ IA T F   D LG ++S++V+ DL+
Sbjct: 9   LTIAAMALGMTAVIPMPAWALVELNVNKGNVEPLPIAITDFQGGDALGAQISQIVTADLK 68

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           RS +F  I + +F +KI+NPD+ PRF DW  + AQ LVTG V KE   R+R ++RLWD  
Sbjct: 69  RSGLFAPIDKSAFIEKISNPDAAPRFDDWKVINAQALVTGSVSKEADGRIRAQYRLWDTF 128

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             +Q+ G++FF++ A+ R++AH I+D IY+ +TGEKG F++R++F+ ES      K  L 
Sbjct: 129 AGQQMSGEQFFANDANQRRVAHIIADAIYERLTGEKGYFDTRVVFIDESGAKNARKKRLA 188

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD+DGAN+RYL+  R  I+  PRFSPN+Q++ Y +Y+     RVYL+     +  + +G
Sbjct: 189 IMDQDGANVRYLSDGR-SIVLTPRFSPNRQEITYMSYESGQ-PRVYLLQIETGQR-ELVG 245

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEA-MDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           NF  M  APRFS +G++ ++S+ +D+   +I+++DL+S +T RLTN+  I+ S SYSPD 
Sbjct: 246 NFPGMTFAPRFSPDGQKVIMSLLRDDGNSNIFAMDLRSRSTTRLTNSTAIDTSPSYSPDG 305

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           S++VF SDR G+ Q+YVM ++GS Q RIS   +  Y  PVWSP+GDLIAFTK +G +F I
Sbjct: 306 SKVVFTSDRGGRAQIYVMGADGSGQTRISF-GDGVYSTPVWSPRGDLIAFTKQTGGEFQI 364

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           GVMK DGS ER+L      + PTW+P+GR L+F R  +G  G KL S+DL GRNE  I T
Sbjct: 365 GVMKTDGSGERILSSGFQQEGPTWAPNGRVLMFFRDSNG--GPKLVSVDLTGRNEQPIPT 422

Query: 434 PAYASDPQW 442
             +ASDP W
Sbjct: 423 ANFASDPAW 431


>gi|319781027|ref|YP_004140503.1| Tol-Pal system beta propeller repeat protein TolB [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317166915|gb|ADV10453.1| Tol-Pal system beta propeller repeat protein TolB [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 436

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 194/410 (47%), Positives = 276/410 (67%), Gaps = 7/410 (1%)

Query: 34  AFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
           A V++  N  N  P+ IA T F   D LG ++S++V+ DL+RS +F  I + +F +KITN
Sbjct: 28  ALVELNVNKGNVEPLPIAITDFQGGDALGAQISQIVTADLKRSGLFAPIDKSAFIEKITN 87

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
           PD+ PRF DW  + AQ LVTG V KE   R+R ++RLWD    +Q+ G++FF++ A+ R+
Sbjct: 88  PDAAPRFDDWKVINAQALVTGSVSKEADGRIRAQYRLWDTFAGQQMAGEQFFANDANQRR 147

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           +AH I+D IY+ +TGEKG F++R++F+ ES      K  L +MD+DGAN+RYL+  R  I
Sbjct: 148 VAHIIADAIYERLTGEKGYFDTRVVFIDESGAKNARKKRLAIMDQDGANVRYLSDGR-SI 206

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  PRFSPN+Q++ Y +Y+     RVYL+     +  + +GNF  M  APRFS +G++ +
Sbjct: 207 VLTPRFSPNRQEITYMSYESGQP-RVYLLQIETGQR-ELVGNFPGMTFAPRFSPDGQKVI 264

Query: 274 ISVQKDEA-MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +S+ +D+   +I+++DL+S +T RLTN+  I+ S SYSPD S++VF SDR G+ Q+YVM 
Sbjct: 265 MSLLRDDGNSNIFAMDLRSRSTTRLTNSTAIDTSPSYSPDGSKVVFTSDRGGRAQIYVMG 324

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           ++GS Q RIS   +  Y  PVWSP+GDLIAFTK +G +F IGVMK DGS ER+L      
Sbjct: 325 ADGSGQTRISF-GDGVYSTPVWSPRGDLIAFTKQTGGEFQIGVMKTDGSGERILSSGFQQ 383

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           + PTW+P+GR L+F R   G  G KL S+DL GRNE  I T  +ASDP W
Sbjct: 384 EGPTWAPNGRVLMFFRDSAG--GPKLVSVDLTGRNEQSIPTANFASDPAW 431


>gi|260467065|ref|ZP_05813245.1| Tol-Pal system beta propeller repeat protein TolB [Mesorhizobium
           opportunistum WSM2075]
 gi|259029174|gb|EEW30470.1| Tol-Pal system beta propeller repeat protein TolB [Mesorhizobium
           opportunistum WSM2075]
          Length = 436

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 192/415 (46%), Positives = 279/415 (67%), Gaps = 7/415 (1%)

Query: 34  AFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
           A V++  N  N  P+ IA T F   D LG ++S++++ DL+RS +F  I + +F +KI+N
Sbjct: 28  ALVELNVNKGNVEPLPIAITDFQGGDALGAQISQIITADLKRSGLFAPIDKSAFIEKISN 87

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
           PD+ PRF DW  + AQ LVTG V KE   R+R ++RLWD    +Q+ G++FF++ A+ R+
Sbjct: 88  PDAAPRFDDWKVINAQALVTGSVSKEADGRIRAQYRLWDTFAGQQMSGEQFFANDANQRR 147

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           +AH I+D IY+ +TGEKG F++R++F+ ES      K  L +MD+DGAN+RYL+  R  I
Sbjct: 148 VAHIIADAIYERLTGEKGYFDTRVVFIDESGAKNARKKRLAIMDQDGANVRYLSDGR-SI 206

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  PRFSPN+Q++ Y +Y+     RVYL+     +  + +GNF  M  APRFS +G++ +
Sbjct: 207 VLTPRFSPNRQEITYMSYESGQP-RVYLLQIETGQR-ELVGNFPGMTFAPRFSPDGQKVI 264

Query: 274 ISVQKDEA-MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +S+ +D+   +I+++DL+S +T RLTN+  I+ S SYSPD S++VF SDR G+ Q+YVM 
Sbjct: 265 MSLLRDDGNSNIFAMDLRSRSTTRLTNSTAIDTSPSYSPDGSKVVFTSDRGGRAQIYVMG 324

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           ++GS Q RIS   +  Y  PVWSP+GDLIAFTK +G +F IGVMK DGS ER+L      
Sbjct: 325 ADGSGQTRISF-GDGVYSTPVWSPRGDLIAFTKQTGGEFQIGVMKTDGSGERILSSGFQQ 383

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           + PTW+P+GR L+F R  +G  G KL S+DL GRNE  I T  +ASDP W   ++
Sbjct: 384 EGPTWAPNGRVLMFFRDANG--GPKLISVDLTGRNEQPIPTSNFASDPAWSPLLE 436


>gi|90426222|ref|YP_534592.1| translocation protein TolB [Rhodopseudomonas palustris BisB18]
 gi|90108236|gb|ABD90273.1| Twin-arginine translocation pathway signal [Rhodopseudomonas
           palustris BisB18]
          Length = 450

 Score =  382 bits (980), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 191/432 (44%), Positives = 281/432 (65%), Gaps = 15/432 (3%)

Query: 22  VLIGG-------FFPTSIHAFVKVATNSANYSPVSIAFTKFVSI----DELGGKVSEVVS 70
            L+GG         P    A  ++     N +P+ IA   FV+     +E+G  V++V++
Sbjct: 18  ALLGGAGSAAALLLPGGAQAQTRLQITEGNVAPMPIAIPNFVAGTPADNEVGLGVAQVIT 77

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            +L+RS +F  I Q +F ++I+N D+ P+FQ W ++ AQ LVTGR+ K+G  RL+ EFRL
Sbjct: 78  NNLKRSGLFAPIDQAAFIERISNIDTPPQFQSWKTINAQALVTGRMTKQGDGRLKAEFRL 137

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           WDV   +Q+ G+++F+SP  WR+IAH ISD IY+ +TGEKG F+SR++F+ E+       
Sbjct: 138 WDVAAGQQLTGQQYFTSPEYWRRIAHIISDQIYERLTGEKGYFDSRVVFIDETGSKERRV 197

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L +MD+DGAN+RYLT   D +L  PRFSP+ Q++ Y  +   D  RVYL +    +  
Sbjct: 198 KRLALMDQDGANVRYLTRGADLVL-TPRFSPSTQEITYMEFGQGDP-RVYLFNIETGQR- 254

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + +GNF  M  +PRFS +G+R ++S+Q+    +++ +DL+S +T RLT+T  I+ S SY+
Sbjct: 255 EIVGNFPGMSFSPRFSPDGQRVIMSLQQGGNSNLFVMDLRSKSTTRLTDTPAIDTSPSYA 314

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD S+I FESDR GK Q+YVM + G   +RIS   E SY  PVWSP+GD IAFTK  G +
Sbjct: 315 PDGSKICFESDRGGKPQIYVMPAGGGGAQRISFG-EGSYSTPVWSPRGDYIAFTKQGGGQ 373

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           F+IG+MK DGS ERLL    + + PT++P+GR L+F R   G+ G  L+++D++GRNE  
Sbjct: 374 FSIGIMKPDGSGERLLTSGYHNEGPTFAPNGRVLMFFRDPGGNGGPSLFTVDISGRNEQK 433

Query: 431 INTPAYASDPQW 442
           + TP +ASDP W
Sbjct: 434 VPTPGFASDPAW 445


>gi|118574595|sp|Q20X63|TOLB_RHOPB RecName: Full=Protein tolB; Flags: Precursor
          Length = 447

 Score =  381 bits (979), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/432 (44%), Positives = 281/432 (65%), Gaps = 15/432 (3%)

Query: 22  VLIGG-------FFPTSIHAFVKVATNSANYSPVSIAFTKFVSI----DELGGKVSEVVS 70
            L+GG         P    A  ++     N +P+ IA   FV+     +E+G  V++V++
Sbjct: 15  ALLGGAGSAAALLLPGGAQAQTRLQITEGNVAPMPIAIPNFVAGTPADNEVGLGVAQVIT 74

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            +L+RS +F  I Q +F ++I+N D+ P+FQ W ++ AQ LVTGR+ K+G  RL+ EFRL
Sbjct: 75  NNLKRSGLFAPIDQAAFIERISNIDTPPQFQSWKTINAQALVTGRMTKQGDGRLKAEFRL 134

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           WDV   +Q+ G+++F+SP  WR+IAH ISD IY+ +TGEKG F+SR++F+ E+       
Sbjct: 135 WDVAAGQQLTGQQYFTSPEYWRRIAHIISDQIYERLTGEKGYFDSRVVFIDETGSKERRV 194

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L +MD+DGAN+RYLT   D +L  PRFSP+ Q++ Y  +   D  RVYL +    +  
Sbjct: 195 KRLALMDQDGANVRYLTRGADLVL-TPRFSPSTQEITYMEFGQGDP-RVYLFNIETGQR- 251

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + +GNF  M  +PRFS +G+R ++S+Q+    +++ +DL+S +T RLT+T  I+ S SY+
Sbjct: 252 EIVGNFPGMSFSPRFSPDGQRVIMSLQQGGNSNLFVMDLRSKSTTRLTDTPAIDTSPSYA 311

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD S+I FESDR GK Q+YVM + G   +RIS   E SY  PVWSP+GD IAFTK  G +
Sbjct: 312 PDGSKICFESDRGGKPQIYVMPAGGGGAQRISFG-EGSYSTPVWSPRGDYIAFTKQGGGQ 370

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           F+IG+MK DGS ERLL    + + PT++P+GR L+F R   G+ G  L+++D++GRNE  
Sbjct: 371 FSIGIMKPDGSGERLLTSGYHNEGPTFAPNGRVLMFFRDPGGNGGPSLFTVDISGRNEQK 430

Query: 431 INTPAYASDPQW 442
           + TP +ASDP W
Sbjct: 431 VPTPGFASDPAW 442


>gi|91978608|ref|YP_571267.1| translocation protein TolB [Rhodopseudomonas palustris BisB5]
 gi|91685064|gb|ABE41366.1| Twin-arginine translocation pathway signal [Rhodopseudomonas
           palustris BisB5]
          Length = 449

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/411 (46%), Positives = 275/411 (66%), Gaps = 8/411 (1%)

Query: 36  VKVATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
            +V     N +P+ IA   FV    S +E+GG VS+V++ +L+RS +F  I Q ++ +KI
Sbjct: 38  ARVQITEGNVAPLPIAIPNFVAGTPSDNEVGGGVSQVITNNLKRSGLFAPIDQAAYLEKI 97

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
           TN D  P+F+ W S+ AQ LVTGR+ ++   RL+ EFRLWDV   +Q+ G+++F+SP  W
Sbjct: 98  TNIDVPPQFKSWTSINAQALVTGRMTRQPDGRLKAEFRLWDVATGQQLAGQQYFTSPEYW 157

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R+IAH ISD IY+ +TGEKG F+SR++F+ ES  +      L +MD+DGAN+RYLT   D
Sbjct: 158 RRIAHIISDQIYERLTGEKGYFDSRVVFIDESGPADRRVKRLALMDQDGANVRYLTRGSD 217

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +L  PRFSP+ Q++ Y  +   D  +VYL +    +  + +GNF  M  APRFS +G+R
Sbjct: 218 LVL-TPRFSPSTQEITYMEFGQGDP-KVYLFNIETGQR-EIVGNFPGMSFAPRFSPDGQR 274

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            ++S+Q+    +++ +DL+S  T RLT+T  I+ S SYSPD+++I FESDR GK Q+Y+M
Sbjct: 275 IIMSLQQGGNSNLFVMDLRSKTTTRLTDTPAIDTSPSYSPDAARICFESDRGGKPQIYIM 334

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            + G   +RIS   + SY  PVWSP+GD IAFTK  G +FAIG+MK DGS ER+L    +
Sbjct: 335 PAGGGQAQRISF-GDGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKPDGSGERILTSGFH 393

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            + PT++P+GR L+F R   G+ G  LY++D++GRNE  + TP YASDP W
Sbjct: 394 NEGPTFAPNGRVLMFFRDPGGNAGPSLYTVDVSGRNELRVPTPGYASDPAW 444


>gi|27382263|ref|NP_773792.1| translocation protein TolB [Bradyrhizobium japonicum USDA 110]
 gi|27355434|dbj|BAC52417.1| tolB protein [Bradyrhizobium japonicum USDA 110]
          Length = 491

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/441 (44%), Positives = 284/441 (64%), Gaps = 20/441 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFV----KVATNSANYSPVSIAFTKFV----SIDELGGK 64
           M +    L +L GG      HAF     ++  +   + PV IA T F+    S  ++G  
Sbjct: 50  MTLTGSGLAMLGGG------HAFAQGQPRLRIDPTEFQPVPIAITNFLPGSPSDGDVGNG 103

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           V++V++ +L+RS +F  I Q +F ++I+N D  P+FQ+W ++ AQ LVTGR+ ++   RL
Sbjct: 104 VTQVITNNLKRSGLFAPIDQAAFIERISNIDVAPQFQNWKTINAQALVTGRMTRQPDGRL 163

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           + EFRLWDV   +Q+ G+++F+SP  WR+IAH ISD IY+ +TGEKG F+SR++FV E+ 
Sbjct: 164 KAEFRLWDVVSGQQLAGQQYFTSPEYWRRIAHIISDQIYERMTGEKGYFDSRVVFVDETG 223

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L +MD+DGAN+RYLT   D +L  PRFSPN Q++ Y  +   D  +VYL + 
Sbjct: 224 PKERRVKRLAMMDQDGANVRYLTRGSDLVL-TPRFSPNSQEITYMEFGQGDP-KVYLFNI 281

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  + +GNF  M  APRFS +G+R ++S+Q+    +++ +DL+S +T RLT+T  I+
Sbjct: 282 ETGQR-EIVGNFPGMTFAPRFSPDGQRVIMSLQQGGNSNLFVMDLRSRSTTRLTDTPAID 340

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---QDKEASYFDPVWSPQGDLI 361
            S SYSPD ++I FESDR G+ Q+YVM + G   +RIS    D  A+Y  PVWSP+GD I
Sbjct: 341 TSPSYSPDGTRICFESDRGGRSQIYVMAAGGGAAQRISFSKDDTNATYSTPVWSPRGDYI 400

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           AFT+  G +F+IGVMK DGS ERLL    + + PT+SP+GR L+F R   G  G  LYS+
Sbjct: 401 AFTRQGGGQFSIGVMKPDGSGERLLTSGFHNEGPTFSPNGRVLMFFRDPGGSGGPSLYSV 460

Query: 422 DLNGRNETLINTPAYASDPQW 442
           D++GRNE  + TP +ASDP W
Sbjct: 461 DISGRNELKVPTPGFASDPAW 481


>gi|86748935|ref|YP_485431.1| translocation protein TolB [Rhodopseudomonas palustris HaA2]
 gi|118574594|sp|Q2IZ40|TOLB_RHOP2 RecName: Full=Protein tolB; Flags: Precursor
 gi|86571963|gb|ABD06520.1| Twin-arginine translocation pathway signal [Rhodopseudomonas
           palustris HaA2]
          Length = 449

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 189/411 (45%), Positives = 277/411 (67%), Gaps = 8/411 (1%)

Query: 36  VKVATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
            +V     N +P+ IA   FV    S +E+GG V++V++ +L+RS +F  I Q ++ +KI
Sbjct: 38  ARVQITEGNVAPLPIAIPNFVAGTPSDNEVGGGVAQVITNNLKRSGLFAPIDQAAYVEKI 97

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
           TN D  P+F+ W S+ AQ LVTGR+ ++   RL+ EFRLWDV   +Q+ G+++F+SP  W
Sbjct: 98  TNIDVPPQFKSWTSINAQALVTGRMTRQSDGRLKAEFRLWDVATGQQLAGQQYFTSPEYW 157

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R+IAH ISD IY+ +TGEKG F+SR++F+ ES  +      L +MD+DGAN+RYLT   D
Sbjct: 158 RRIAHIISDQIYERLTGEKGYFDSRVVFIDESGPADRRVKRLALMDQDGANVRYLTRGSD 217

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +L  PRFSP+ Q++ Y  +   D  +VYL +    +  + +GNF  M  APRFS +G+R
Sbjct: 218 LVL-TPRFSPSTQEITYMEFGQGD-PKVYLFNIETGQR-EIVGNFPGMSFAPRFSPDGQR 274

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            ++S+Q+    +++ +DL+S +T RLT+T  I+ S SYSPD+++I FESDR GK Q+YVM
Sbjct: 275 IIMSLQQGGNSNLFVMDLRSKSTTRLTDTPAIDTSPSYSPDAARICFESDRGGKPQIYVM 334

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            ++G   +RIS   + SY  PVWSP+GD IAFTK  G +FAIG+MK DGS ER+L    +
Sbjct: 335 PASGGQAQRISF-GDGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKPDGSGERILTSGFH 393

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            + PT++P+GR L+F R   G+ G  L+++D++GRNE  + TP YASDP W
Sbjct: 394 NEGPTFAPNGRVLMFFRDPGGNAGPSLFTVDVSGRNELRVPTPGYASDPAW 444


>gi|32699699|sp|Q89ED5|TOLB_BRAJA RecName: Full=Protein tolB; Flags: Precursor
          Length = 454

 Score =  380 bits (976), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/441 (44%), Positives = 284/441 (64%), Gaps = 20/441 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFV----KVATNSANYSPVSIAFTKFV----SIDELGGK 64
           M +    L +L GG      HAF     ++  +   + PV IA T F+    S  ++G  
Sbjct: 13  MTLTGSGLAMLGGG------HAFAQGQPRLRIDPTEFQPVPIAITNFLPGSPSDGDVGNG 66

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           V++V++ +L+RS +F  I Q +F ++I+N D  P+FQ+W ++ AQ LVTGR+ ++   RL
Sbjct: 67  VTQVITNNLKRSGLFAPIDQAAFIERISNIDVAPQFQNWKTINAQALVTGRMTRQPDGRL 126

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           + EFRLWDV   +Q+ G+++F+SP  WR+IAH ISD IY+ +TGEKG F+SR++FV E+ 
Sbjct: 127 KAEFRLWDVVSGQQLAGQQYFTSPEYWRRIAHIISDQIYERMTGEKGYFDSRVVFVDETG 186

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L +MD+DGAN+RYLT   D +L  PRFSPN Q++ Y  +   D  +VYL + 
Sbjct: 187 PKERRVKRLAMMDQDGANVRYLTRGSDLVL-TPRFSPNSQEITYMEFGQGDP-KVYLFNI 244

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  + +GNF  M  APRFS +G+R ++S+Q+    +++ +DL+S +T RLT+T  I+
Sbjct: 245 ETGQR-EIVGNFPGMTFAPRFSPDGQRVIMSLQQGGNSNLFVMDLRSRSTTRLTDTPAID 303

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---QDKEASYFDPVWSPQGDLI 361
            S SYSPD ++I FESDR G+ Q+YVM + G   +RIS    D  A+Y  PVWSP+GD I
Sbjct: 304 TSPSYSPDGTRICFESDRGGRSQIYVMAAGGGAAQRISFSKDDTNATYSTPVWSPRGDYI 363

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           AFT+  G +F+IGVMK DGS ERLL    + + PT+SP+GR L+F R   G  G  LYS+
Sbjct: 364 AFTRQGGGQFSIGVMKPDGSGERLLTSGFHNEGPTFSPNGRVLMFFRDPGGSGGPSLYSV 423

Query: 422 DLNGRNETLINTPAYASDPQW 442
           D++GRNE  + TP +ASDP W
Sbjct: 424 DISGRNELKVPTPGFASDPAW 444


>gi|39934195|ref|NP_946471.1| translocation protein TolB [Rhodopseudomonas palustris CGA009]
 gi|192289721|ref|YP_001990326.1| translocation protein TolB [Rhodopseudomonas palustris TIE-1]
 gi|67461966|sp|Q6NAR1|TOLB_RHOPA RecName: Full=Protein tolB; Flags: Precursor
 gi|39648043|emb|CAE26563.1| putative tolB protein precursor, periplasmic protein involved in
           the tonb-independent uptake of group A colicins
           [Rhodopseudomonas palustris CGA009]
 gi|192283470|gb|ACE99850.1| Tol-Pal system beta propeller repeat protein TolB [Rhodopseudomonas
           palustris TIE-1]
          Length = 444

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/411 (46%), Positives = 274/411 (66%), Gaps = 8/411 (1%)

Query: 36  VKVATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
            +V     N +P+ IA   FV    S  E+G  VS+V++ +L+RS +F  I Q ++ +KI
Sbjct: 33  ARVQITEGNVAPLPIAIPNFVAGTPSDAEVGTGVSQVITNNLKRSGLFAPIDQAAYLEKI 92

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
           TN D  P+F+ W S+ AQ LVTGR+ ++G  RL+ EFRLWDV   +Q+ G+++F+SP  W
Sbjct: 93  TNIDVPPQFKSWASINAQALVTGRMTRQGDGRLKAEFRLWDVATGQQLAGQQYFTSPEYW 152

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R+IAH ISD IY+ +TGEKG F+SR++F+ ES  +      L +MD+DGAN+RYLT   D
Sbjct: 153 RRIAHIISDQIYERLTGEKGYFDSRVVFIDESGPADRRVKRLALMDQDGANVRYLTRGSD 212

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +L  PRFSP  Q++ Y  +   +  RVYL +    +  + +GNF  M  APRFS +G+R
Sbjct: 213 LVL-TPRFSPTNQEITYMEFGQGEP-RVYLFNVETGQR-EIVGNFPGMSFAPRFSPDGQR 269

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            ++S+Q+    +++ +DL+S AT RLT+T  I+ S SY+PD S+I FESDR GK Q+Y+M
Sbjct: 270 IIMSLQQGGNSNLFVMDLRSKATTRLTDTPAIDTSPSYAPDGSRICFESDRGGKPQIYIM 329

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            ++G   +RIS   + SY  PVWSP+GD IAFTK  G +FAIG+MK DGS ER+L    +
Sbjct: 330 PASGGQAQRISF-GDGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKPDGSGERILTSGFH 388

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            + PT++P+GR L+F R   G+ G  L+++D++GRNE  + TP YASDP W
Sbjct: 389 NEGPTFAPNGRVLMFFRDPGGNAGPSLFTVDVSGRNELRVPTPGYASDPAW 439


>gi|110635500|ref|YP_675708.1| translocation protein TolB [Mesorhizobium sp. BNC1]
 gi|118574584|sp|Q11DI2|TOLB_MESSB RecName: Full=Protein tolB; Flags: Precursor
 gi|110286484|gb|ABG64543.1| TolB-like protein [Chelativorans sp. BNC1]
          Length = 439

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 191/411 (46%), Positives = 272/411 (66%), Gaps = 4/411 (0%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
            A V++  N     PV IA T F+S    G ++S V++ DL+RS +F  I + +F +KI+
Sbjct: 27  RALVEIDVNRGVVEPVPIAITDFLSAGGRGAEISAVIAADLKRSGLFAPIDRGAFIEKIS 86

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
           NPD  PRF+DW  + AQ +VTGRV +E   RL+ EFRLWD    +Q++G++FF+ PA WR
Sbjct: 87  NPDVAPRFEDWKVINAQAIVTGRVTEEPGGRLKAEFRLWDTFAGQQLVGEQFFAKPADWR 146

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           ++AH I+D IY+  TGEKG F+SRI+FV ES         L +MD+DGAN R LT  R  
Sbjct: 147 RVAHIIADTIYEQFTGEKGYFDSRIVFVDESGSKENRVKRLAIMDQDGANYRALTDGR-S 205

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           I+ +P FSP +Q++ Y +++     +VYL+     +      NF +M  A RF+  G + 
Sbjct: 206 IVLKPSFSPQRQEITYVSFEGGQ-PQVYLLQIETGQRELVGNNFPTMSFASRFNPVGDKI 264

Query: 273 LIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           ++S ++ D   +IY++DL++  T RLT+T  I+ S SYSPD +++VF SDR G+ Q+YVM
Sbjct: 265 IMSLLRTDGNSNIYTMDLKTRTTARLTDTNAIDTSPSYSPDGNKVVFTSDRGGRAQIYVM 324

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            ++GS+ +RIS   + +Y +PVWSP+GDLIAFTK SG +F IG+M+ DGS ER+L     
Sbjct: 325 NADGSNPQRISF-GDGTYSEPVWSPRGDLIAFTKQSGGQFQIGIMRTDGSGERILSTGFQ 383

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           ++ PTWSP+GR ++F R+  G  G KLYSIDL GRNE LI TP +ASDP W
Sbjct: 384 IEGPTWSPNGRVIMFFRQDAGAAGPKLYSIDLTGRNEQLIPTPNFASDPAW 434


>gi|319406262|emb|CBI79899.1| TolB protein [Bartonella sp. AR 15-3]
          Length = 440

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 190/428 (44%), Positives = 283/428 (66%), Gaps = 5/428 (1%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
           +L  L+V +  F  +S +A +K     A+++P+ IA   F+S D LG K++ V++ DL+R
Sbjct: 10  SLFFLIVYLWFFGFSSSYAQLKGTIAKADFNPIPIAVADFLSHDSLGIKIAAVIAADLER 69

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F  + + SF +   NPD  P F DW  + AQ L+TG+V +E   RL+VEFRLWDV  
Sbjct: 70  SGLFFPLQKSSFPEISPNPDKQPNFSDWKKINAQGLITGKVYRETDGRLKVEFRLWDVVG 129

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           ++QI G++F+++   WR++AH I+D+IY  +TGEKG F++RI+F+ E+         L +
Sbjct: 130 KRQIKGQRFYTATERWRRVAHMIADEIYSKMTGEKGYFDTRIVFIDETGPHNARIKRLAM 189

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD+DGAN+ YL+   ++++  PRFSP +Q++ Y  YD      VYL    I +  + +G 
Sbjct: 190 MDQDGANLIYLSEG-NELVLTPRFSPKRQEITYMAYDKNKTPHVYLQQMEIGQR-ELLGT 247

Query: 256 FRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           F +M +APRFS NG++ ++S +Q D + ++Y++DL++    RLT T  I+ SASYSPD +
Sbjct: 248 FDNMTIAPRFSPNGQKVIMSLLQNDGSANLYTMDLRTRQMTRLTATKAIDTSASYSPDGT 307

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +IVF SDR GK Q+Y M  +GSD +RIS + E SY  P+WSP+GD IAFTK    +F+IG
Sbjct: 308 KIVFSSDRSGKPQIYTMNVDGSDLQRISSN-EGSYSTPIWSPRGDYIAFTKQFQGQFSIG 366

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           VM  DG  ER+L    + + PTW+P+GR L+F R+  G+ GSK+Y+ID+ GRNE L+ TP
Sbjct: 367 VMHPDGKGERILTTGFHNEGPTWAPNGRVLMFFRQNPGE-GSKIYTIDITGRNERLLRTP 425

Query: 435 AYASDPQW 442
             ASDP W
Sbjct: 426 NDASDPAW 433


>gi|85714380|ref|ZP_01045368.1| TolB [Nitrobacter sp. Nb-311A]
 gi|85698827|gb|EAQ36696.1| TolB [Nitrobacter sp. Nb-311A]
          Length = 441

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 189/411 (45%), Positives = 275/411 (66%), Gaps = 8/411 (1%)

Query: 36  VKVATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
            +V     N +P+ IA   FV    S +E+G  V++V++ +L+RS +F  I Q ++ +KI
Sbjct: 30  ARVQITEGNVAPLPIAIPNFVGGSASDNEVGAGVAKVITNNLKRSGLFAPIDQAAYIEKI 89

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
           TN D  P+F +W ++ AQ LVTGR+ ++G  RL+ EFRLWDV   +Q+ G+++F+SP  W
Sbjct: 90  TNIDVPPQFANWKTINAQALVTGRMTRQGDGRLKAEFRLWDVATGQQLAGQQYFTSPEYW 149

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R+IAH ISD IY+ +TGEKG F+SR++FV ES  S      L +MD+DGAN+RYLT   D
Sbjct: 150 RRIAHIISDQIYERLTGEKGYFDSRVVFVDESGPSQHRVKRLALMDQDGANVRYLTRGAD 209

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            ++  PRFSP+ Q++ Y  +   D  RVYL +    +  + +GNF  M  APRF+ +G+R
Sbjct: 210 -LVITPRFSPSTQEITYMEFGQGD-PRVYLFNIETGQR-EIVGNFPGMSFAPRFAPDGQR 266

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            ++S+Q+    +++ +DL+S +T RLT+T  I+ S SYSPD ++I FESDR GK Q+YVM
Sbjct: 267 IIMSLQQGGNSNLFVMDLRSKSTTRLTDTPAIDTSPSYSPDGARICFESDRGGKPQIYVM 326

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            ++G   +RIS   E SY  PVWSP+GD IAFTK  G +F+IG++K DGS ER+L    +
Sbjct: 327 GASGGGAQRISFG-EGSYSTPVWSPRGDYIAFTKQGGGQFSIGIIKPDGSGERILTSGFH 385

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            + PT++P+GR L+F R   G  G  LY+ID++GRNE  + TP +ASDP W
Sbjct: 386 NEGPTFAPNGRVLMFFRDPGGAGGPSLYTIDVSGRNELKVPTPGFASDPAW 436


>gi|158422148|ref|YP_001523440.1| twin-arginine translocation pathway signal precursor [Azorhizobium
           caulinodans ORS 571]
 gi|158329037|dbj|BAF86522.1| twin-arginine translocation pathway signal precursor [Azorhizobium
           caulinodans ORS 571]
          Length = 450

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 186/412 (45%), Positives = 271/412 (65%), Gaps = 4/412 (0%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
           +  A +K+   S    P+ IA T F+   + G  +S V++ DL+RS +F  I   +F ++
Sbjct: 38  AAQAALKLEITSGTPQPIPIAVTDFIGEGDQGRAISGVITADLKRSGLFAPIDPKAFVEQ 97

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
           I+NPD  PRFQDW  + AQ LVTGRV ++G  RL+ EFRLWDV   +Q++G+++F+ P +
Sbjct: 98  ISNPDLAPRFQDWRVINAQGLVTGRVTRQGDGRLKAEFRLWDVFAGQQLMGQQYFTQPEN 157

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           WR++AH I+D IY+ +TGEKG F++RI+FV ES         L +MD+DGAN+ YLT   
Sbjct: 158 WRRVAHIIADAIYERLTGEKGYFDTRIVFVDESGAKDRRVKRLAIMDQDGANVTYLT-RG 216

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D ++  PRFSP  Q++ Y +Y   +  RV+L++    +  + +GNF  M  APRFS +G+
Sbjct: 217 DALVLTPRFSPTSQEITYMSYAQGE-PRVFLLNIETGQR-EIVGNFPGMSFAPRFSPDGQ 274

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R ++S+Q+    +I+ +DL+S AT RLT+T  I+ +  YSPD  QI FESDR G  Q+YV
Sbjct: 275 RVIMSLQQGGNANIFVMDLRSKATTRLTDTPAIDTAPCYSPDGRQICFESDRGGSSQIYV 334

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M ++GS Q+RIS    A Y  PVWSP+GD+IAFT+ +  KFAIGVM+ DG  ER+L E  
Sbjct: 335 MNADGSGQRRISFGN-ARYNTPVWSPRGDVIAFTRQAEGKFAIGVMRPDGQGERVLTEGY 393

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           + + PT++P+GR ++F R   G  G  L++ID+ G NE  + TP+Y SDP W
Sbjct: 394 HNEGPTFAPNGRVIMFFRDPPGGGGPNLFTIDVTGYNEQRVPTPSYGSDPAW 445


>gi|209886402|ref|YP_002290259.1| Tol-Pal system beta propeller repeat protein TolB [Oligotropha
           carboxidovorans OM5]
 gi|209874598|gb|ACI94394.1| Tol-Pal system beta propeller repeat protein TolB [Oligotropha
           carboxidovorans OM5]
          Length = 449

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 189/411 (45%), Positives = 273/411 (66%), Gaps = 10/411 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVSI----DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
            +V  N  N+ P+ IA   FV+     +E+   ++ V++ +L+RS +F  I Q ++ ++I
Sbjct: 40  ARVRINEGNFQPIPIAIPNFVAGGQADNEVSTGIASVITNNLRRSGLFAPIDQAAYIERI 99

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
           +N D  P+FQ+W  + AQ LVTGR  ++G  RL+ EFRLWDV   +Q+ G+++F+SP SW
Sbjct: 100 SNIDVAPQFQNWRQINAQALVTGRATRQGDGRLKAEFRLWDVPAAQQLTGQQYFTSPESW 159

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R++AH ISD IY+ +TGEKG F+SR++FV E+         L +MD+DGAN+RYLT   D
Sbjct: 160 RRVAHIISDQIYERLTGEKGYFDSRVVFVDETGPKDRRVKRLAMMDQDGANVRYLTRGAD 219

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +L  PRFSP  Q++ Y  +   D  RVYL +    +  + +GNF  M  APRFS +G+R
Sbjct: 220 LVL-TPRFSPTTQEITYMEFGGGD-PRVYLFNVETGQR-EIVGNFPGMSFAPRFSPDGQR 276

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            ++S+Q+    ++Y +DL+S +T RLT+T  I+ S SY+PDSS+I FESDR GK Q+YVM
Sbjct: 277 IIMSLQQGGNSNLYVMDLRSKSTTRLTDTPAIDTSPSYAPDSSRICFESDRGGKPQIYVM 336

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            +NG   +RIS   + SY  PVWSP+GD IAFTK  G +FAIG+MK DGS ER+L    +
Sbjct: 337 GANGGAAQRISF-GDGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKPDGSGERILTSGYH 395

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            + PT++P+GR L+F R   G  G  LY++D++GRNE  + TP +ASDP W
Sbjct: 396 NEGPTFAPNGRVLMFFRDLGG--GPNLYTVDISGRNELKVPTPGFASDPAW 444


>gi|75676901|ref|YP_319322.1| translocation protein TolB [Nitrobacter winogradskyi Nb-255]
 gi|118574589|sp|Q3SP21|TOLB_NITWN RecName: Full=Protein tolB; Flags: Precursor
 gi|74421771|gb|ABA05970.1| TolB [Nitrobacter winogradskyi Nb-255]
          Length = 450

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 189/411 (45%), Positives = 274/411 (66%), Gaps = 8/411 (1%)

Query: 36  VKVATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
            +V     N +P+ IA   FV    S +E+G  V++V++ +L+RS +F  I Q ++ +KI
Sbjct: 39  ARVQITEGNVAPLPIAIPNFVGGTPSDNEVGAGVAKVITNNLKRSGLFAPIDQAAYIEKI 98

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
           TN D  P+F +W ++ AQ LVTGR+ ++G  RL+ EFRLWDV   +Q+ G+++F+SP  W
Sbjct: 99  TNIDVPPQFANWKTINAQALVTGRMTRQGDGRLKAEFRLWDVATGQQLAGQQYFTSPEYW 158

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R+IAH ISD IY+ +TGEKG F+SR++FV ES  S      L +MD+DGAN+RYLT   D
Sbjct: 159 RRIAHIISDQIYERLTGEKGYFDSRVVFVDESGSSQRRVKRLALMDQDGANVRYLTRGAD 218

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            ++  PRFSP+ Q+V Y  +   D  RVYL +    +  + +GNF  M  +PRF+ +G+R
Sbjct: 219 -LVITPRFSPSTQEVTYMEFGQGD-PRVYLFNIETGQR-EIVGNFPGMSFSPRFAPDGQR 275

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            ++S+Q+    +++ +DL+S +T RLT+T  I+ S SYSPD ++I FESDR GK Q+YVM
Sbjct: 276 IIMSLQQGGNSNLFVMDLRSKSTTRLTDTPAIDTSPSYSPDGARICFESDRGGKPQIYVM 335

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            + G   +RIS   E SY  PVWSP+GD IAFTK  G +F+IG++K DGS ER+L    +
Sbjct: 336 GATGGGAQRISFG-EGSYSTPVWSPRGDYIAFTKQGGGQFSIGIIKPDGSGERILTSGFH 394

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            + PT++P+GR L+F R   G  G  LY+ID++GRNE  + TP +ASDP W
Sbjct: 395 NEGPTFAPNGRVLMFFRDPGGGGGPSLYTIDVSGRNELKVPTPGFASDPAW 445


>gi|92118972|ref|YP_578701.1| translocation protein TolB [Nitrobacter hamburgensis X14]
 gi|118574587|sp|Q1QHQ6|TOLB_NITHX RecName: Full=Protein tolB; Flags: Precursor
 gi|91801866|gb|ABE64241.1| TolB-like protein [Nitrobacter hamburgensis X14]
          Length = 450

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 194/443 (43%), Positives = 285/443 (64%), Gaps = 15/443 (3%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFV----SID 59
           F      M   +    VL+GG       AF   +V  +  N +P+ IA   FV    S  
Sbjct: 12  FHPSRRQMISGMASAAVLLGGG-----RAFGQARVQIDQGNVAPLPIAIPNFVAGSPSDS 66

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
           E+G  V++V++ +L+RS +F  I Q ++ +KITN D  P+F +W ++ AQ LVTGR+ ++
Sbjct: 67  EVGAGVAKVITNNLKRSGLFAPIDQAAYIEKITNIDVPPQFANWKTINAQALVTGRMTRQ 126

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           G  RL+ EFRLWDV   +Q+ G+++F+SP  WR+IAH ISD IY+ +TGEKG F+SR++F
Sbjct: 127 GDGRLKAEFRLWDVATGQQLAGQQYFTSPEYWRRIAHIISDQIYERLTGEKGYFDSRVVF 186

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ES  +      L +MD+DGAN+RYLT   D ++  PRFSP+ Q++ Y  +   D  RV
Sbjct: 187 VDESGAAQHRIKRLALMDQDGANVRYLTRGAD-LVITPRFSPSTQEITYMEFGQGD-PRV 244

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           YL +    +  + +GNF  M  +PRF+ +G+R ++S+Q+    +++ +DL+S +T RLT+
Sbjct: 245 YLFNIETGQR-EIVGNFPGMSFSPRFAPDGQRIIMSLQQGGNSNLFVMDLRSKSTTRLTD 303

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T  I+ S SYSPD  +I FESDR G+ Q+YVM + G   +RIS   E SY  PVWSP+GD
Sbjct: 304 TPAIDTSPSYSPDGGRICFESDRGGRPQIYVMGATGGAAQRISFG-EGSYSTPVWSPRGD 362

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAFTK  G +F+IG++K DGS ER+L    + + PT++P+GR L+F R   G++G  LY
Sbjct: 363 YIAFTKQGGGQFSIGIIKPDGSGERILTSGFHNEGPTFAPNGRVLMFFRDPGGNSGPSLY 422

Query: 420 SIDLNGRNETLINTPAYASDPQW 442
           +ID++GRNE  + TP +ASDP W
Sbjct: 423 TIDVSGRNELKVPTPGFASDPAW 445


>gi|316932664|ref|YP_004107646.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Rhodopseudomonas palustris DX-1]
 gi|315600378|gb|ADU42913.1| Tol-Pal system beta propeller repeat protein TolB [Rhodopseudomonas
           palustris DX-1]
          Length = 444

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 188/411 (45%), Positives = 272/411 (66%), Gaps = 8/411 (1%)

Query: 36  VKVATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
            +V     N +P+ IA   FV    S  E+G  VS+V++ +L+RS +F  I Q ++ +KI
Sbjct: 33  ARVQITEGNVAPLPIAIPNFVAGTPSDGEVGVGVSQVITNNLKRSGLFAPIDQAAYLEKI 92

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
           TN D  P+F+ W S+ AQ LVTGR+ ++G  RL+ EFRLWDV   +Q+ G+++F+SP  W
Sbjct: 93  TNIDVPPQFKSWASINAQALVTGRMTRQGDGRLKAEFRLWDVATGQQLAGQQYFTSPEYW 152

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R+IAH ISD IY+ +TGEKG F+SR++F+ ES  +      L +MD+DGAN+RYLT   D
Sbjct: 153 RRIAHIISDQIYERLTGEKGYFDSRVVFIDESGPAERRVKRLALMDQDGANVRYLTRGSD 212

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +L  PRFSP  Q++ Y  +   +  RVYL +    +  + +GNF  M  APRFS +G++
Sbjct: 213 LVL-TPRFSPTTQEITYMEFGQGEP-RVYLFNVETGQR-EIVGNFPGMSFAPRFSPDGQK 269

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            ++S+Q+    +++ +DL+S AT RLT+T  I+ S SY+PD S+I FESDR G+ Q+Y+M
Sbjct: 270 IIMSLQQGGNSNLFVMDLRSKATTRLTDTPAIDTSPSYAPDGSRICFESDRGGRPQIYIM 329

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            + G   +RIS   + SY  PVWSP+GD IAFTK  G +FAIG+MK DGS ER+L    +
Sbjct: 330 PAGGGQAQRISFG-DGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKPDGSGERILTSGFH 388

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            + PT++P+GR L+F R   G  G  L+++D++GRNE  + TP YASDP W
Sbjct: 389 NEGPTFAPNGRVLMFFRDPGGKAGPSLFTVDVSGRNELRVPTPGYASDPAW 439


>gi|298292994|ref|YP_003694933.1| Tol-Pal system beta propeller repeat protein TolB [Starkeya novella
           DSM 506]
 gi|296929505|gb|ADH90314.1| Tol-Pal system beta propeller repeat protein TolB [Starkeya novella
           DSM 506]
          Length = 452

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 187/416 (44%), Positives = 275/416 (66%), Gaps = 11/416 (2%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSID-----ELGGKVSEVVSKDLQRSDVFNLISQDSF 87
            A +K+        P+ IA T FV        E G  V++++S DL+RS +F  I   +F
Sbjct: 37  QAVLKLDVTQGTVQPLPIAITDFVGGGSPQDVEAGKGVTQIISADLRRSGLFAPIDPAAF 96

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
            +KI+NPD+ PRFQDW  + AQ LVTGR+ ++   R++ EFRLWDV   +Q+IG+++F+ 
Sbjct: 97  VEKISNPDASPRFQDWRVINAQALVTGRITRQSDGRVKAEFRLWDVFAGQQLIGQQYFTQ 156

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           P +WR++AH I+D IY+ +TGEKG F++RI+FV ES         L +MD+DGAN+ YLT
Sbjct: 157 PENWRRVAHIIADAIYERLTGEKGYFDTRIVFVDESGPKEKRVKRLAIMDQDGANVTYLT 216

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFS 266
              D ++  PRFSP  Q++ Y +Y   +  RVYL++  I+   +  +GNF +M  +PRF+
Sbjct: 217 -RGDDLVLTPRFSPTSQEITYMSYGRGE-PRVYLLN--IENGQREVVGNFPNMSFSPRFA 272

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+R ++S+Q+    +I+ +DL+S AT RLT+T  I+ +  YSPD SQI FESDR G  
Sbjct: 273 PDGQRVILSLQQGADSNIFVMDLRSKATTRLTDTPAIDTAPCYSPDGSQICFESDRGGGS 332

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Q+YVM  +GS+Q RIS   E  Y  PVWSP+GD+IAFTK +  +FAIG+M+ DG  ER+L
Sbjct: 333 QIYVMNPDGSNQHRISF-GEGRYSTPVWSPRGDVIAFTKQAQGRFAIGLMRPDGQGERIL 391

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            E  + + PT++P+GR ++F R   G+ G +LY++D+ G NE  + TP+YASDP W
Sbjct: 392 TEGYHNEGPTFAPNGRVIMFFRDLGGNGGPQLYTVDVTGYNEQRVPTPSYASDPAW 447


>gi|319407739|emb|CBI81386.1| TolB protein [Bartonella sp. 1-1C]
          Length = 440

 Score =  375 bits (963), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 187/414 (45%), Positives = 276/414 (66%), Gaps = 5/414 (1%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +S +A +K     A+++P+ IA   FVS D LG K++ VV+ DL+RS +F  + + SF +
Sbjct: 24  SSSYAQLKGTIAKADFNPIPIAVADFVSHDSLGIKIAAVVAADLERSGLFFPLQKSSFPE 83

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
              NPD  P F DW  + AQ LVTG++ +E   RL+V+FRLWDV  ++QI G++F+++  
Sbjct: 84  TTPNPDQQPNFPDWKKINAQGLVTGKIYRETDGRLKVDFRLWDVAGKRQIKGQRFYTATE 143

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            WR++AH I+D+IY  +TGEKG F++RI+F+ E+         L +MD+DGAN+ YL+  
Sbjct: 144 RWRRVAHMIADEIYSQMTGEKGYFDTRIVFIDETGPQNARIKRLAIMDQDGANLIYLSDG 203

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            + +L  PRFSP +Q++ Y  Y       VYL    + +  + IG+F +M +APRFS NG
Sbjct: 204 SELVL-TPRFSPKRQEITYMAYGKNKTPHVYLQQMEVGQR-ELIGSFDNMTIAPRFSPNG 261

Query: 270 KRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           ++ ++S +Q D + ++Y++DL++    RLT T  I+ SASYSPD ++IVF SDR GK+Q+
Sbjct: 262 QKVIMSLLQNDGSANLYTMDLRTRKMTRLTATQAIDTSASYSPDGTKIVFASDRNGKQQI 321

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y M  +GSD +RIS + E SY  P+WSP+GD IAFTK    +F+IGVM  DG  ER+L  
Sbjct: 322 YTMNIDGSDLQRISSN-EGSYSTPIWSPRGDYIAFTKQFQGQFSIGVMHPDGKGERILTT 380

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             + + PTW+P+GR L+F R+  G+ GSK+Y+ID+ GRNE L+ TP  ASDP W
Sbjct: 381 GFHNEGPTWAPNGRVLMFFRQNPGE-GSKIYTIDITGRNERLLPTPNDASDPAW 433


>gi|304393324|ref|ZP_07375252.1| Tol-Pal system beta propeller repeat protein TolB [Ahrensia sp.
           R2A130]
 gi|303294331|gb|EFL88703.1| Tol-Pal system beta propeller repeat protein TolB [Ahrensia sp.
           R2A130]
          Length = 444

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/418 (45%), Positives = 274/418 (65%), Gaps = 5/418 (1%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
           +  A V++     N  P+ IA T F+    LG +++ VV+ DL+RS +F  I   +F + 
Sbjct: 31  TAQARVEIDVTRGNVEPLPIAITSFLGEGGLGAEIAGVVTSDLKRSGLFAPIDPAAFIEN 90

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
           I++ ++ P FQ W ++ AQ LVTGRV+ EG  R R EFRLWD    +Q++G ++ ++P +
Sbjct: 91  ISDTNAQPNFQSWTAIKAQALVTGRVVSEGGGRFRTEFRLWDTYGGEQLVGSQYSTNPQN 150

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R++ H I+D IY+++TGEKG F++R+++V+ES         L +MD+DG N R LT   
Sbjct: 151 ARRVGHIIADAIYKALTGEKGYFDTRVVYVAESGPKNKRVKQLAIMDQDGFNNRMLTNGS 210

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D +L  PRFSP++Q++ Y ++   +  RVYL+     +  + +GNF SM  +PRFS +G+
Sbjct: 211 DLVL-TPRFSPSRQEITYMSFAGGEP-RVYLLQIETGQR-EVVGNFPSMTFSPRFSPDGQ 267

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R ++S+Q+D   +IYS+DL+S +T RLTNT  I+ S S+SPD  +IVFESDR G++QLYV
Sbjct: 268 RIVMSLQQDGNANIYSMDLRSRSTTRLTNTPAIDTSPSFSPDGRRIVFESDRGGRQQLYV 327

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M ++GS   RIS     SY  PVWSP+GDLIAFTK SG  F IGVM+ DG  ER+L E  
Sbjct: 328 MGADGSSPTRISFGT-GSYSTPVWSPRGDLIAFTKRSGGNFLIGVMRPDGKGERILTEGY 386

Query: 391 NLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           + + PTW+P+GR L+F R+  G   G KLYSIDL GRNE  + T  +ASDP W   +D
Sbjct: 387 HNEGPTWAPNGRLLMFFRETPGAGGGPKLYSIDLTGRNEQQVPTKTFASDPAWSPLLD 444


>gi|319404775|emb|CBI78376.1| TolB protein [Bartonella rochalimae ATCC BAA-1498]
          Length = 440

 Score =  373 bits (957), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/419 (44%), Positives = 277/419 (66%), Gaps = 5/419 (1%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +S +A +K     A+++P+ IA   FVS D LG K++ VV+ DL+RS +F  + + SF +
Sbjct: 24  SSSYAQLKGTIAKADFNPIPIAVADFVSHDSLGIKIAAVVAADLERSGLFFPLQKSSFPE 83

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
              NPD  P F DW  + AQ LVTG++ +E   RL+V+FRLWDV  ++QI G++F+++  
Sbjct: 84  ITPNPDQQPNFPDWKKINAQGLVTGKIYRETDGRLKVDFRLWDVAGKRQIKGQRFYTATE 143

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            WR++AH I+D+IY  +TGEKG F++RI+F+ E+         L +MD+DGAN+ YL+  
Sbjct: 144 RWRRVAHMIADEIYSQMTGEKGYFDTRIVFIDETGPQNARIKRLAIMDQDGANLIYLSDG 203

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            + IL  PRFSP +Q++ Y  Y       VYL    + +  + IG+F +M +APRFS NG
Sbjct: 204 SELIL-TPRFSPKRQEITYMAYGKNKTPHVYLQQMEVGQR-ELIGSFDNMTIAPRFSPNG 261

Query: 270 KRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           ++ ++S +Q + + ++Y++DL++    RLT T  I+ SASYSPD ++IVF SDR GK Q+
Sbjct: 262 QKVIMSLLQNNGSANLYTMDLRTRKMTRLTATQAIDTSASYSPDGTKIVFSSDRNGKPQI 321

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y M  +GSD +RIS + E SY  P+WSP+GD IAFTK    +F+IGVM  DG  ER+L  
Sbjct: 322 YTMNVDGSDLQRISSN-EGSYSTPIWSPRGDYIAFTKQFQGQFSIGVMHPDGKGERILTT 380

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
             + + PTW+P+GR L+F R+  G+ GSK+Y+ID+ GRNE L+ TP  ASDP W   ++
Sbjct: 381 GFHNEGPTWAPNGRVLMFFRQNPGE-GSKIYTIDITGRNERLLPTPNDASDPAWSPLLN 438


>gi|319409339|emb|CBI82983.1| TolB protein [Bartonella schoenbuchensis R1]
          Length = 444

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 190/418 (45%), Positives = 282/418 (67%), Gaps = 5/418 (1%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +S HA +K   +SA+++P+S+A T F+S D +G K++ VV+ DL+RS +F+L+++ SF +
Sbjct: 24  SSAHAQLKGTISSADFNPISVAITDFISNDSIGLKIAAVVAADLERSGLFSLLNKASFPE 83

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
            I NPDS PRF +W     Q LVTG V +E   RLRV+FRLWDV   +QI G++F+++P 
Sbjct: 84  TIINPDSQPRFLEWQHTNIQGLVTGHVNREASGRLRVDFRLWDVFGNRQIKGRRFYTTPE 143

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            WR++AH ++D+IY  +TGE+G F++RI+FV E+         L +MD+DGAN+ YL+  
Sbjct: 144 HWRRVAHMVADEIYSKMTGERGYFDTRIVFVDETGPRDARVKRLAIMDQDGANLTYLSDG 203

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            + +L  PRFSPN+Q++ Y  YD      VYL    + +  + IG F +M +APRFS +G
Sbjct: 204 SELVL-TPRFSPNRQEITYMAYDKNKTPHVYLQQIEMGQR-ELIGTFDNMTIAPRFSPDG 261

Query: 270 KRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           ++ ++S +Q + + ++Y++DL++    RLT T  I+ SASYSPD  QIVF SDR+G  Q+
Sbjct: 262 QKVIMSLLQNNGSANLYTMDLRTRTMTRLTTTKAIDTSASYSPDGKQIVFSSDRDGTPQI 321

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           YVM ++G++  RIS + E +Y  PVWSP+GD IAFTK    +F+IGVM  DG  ERLL  
Sbjct: 322 YVMNADGTNPYRISFN-EGNYSTPVWSPRGDYIAFTKQFQGQFSIGVMHPDGQGERLLTT 380

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
             + + PTW+P+GR L+F R+  G  G+K+Y+ID+ GRNE  + TP  ASDP W   +
Sbjct: 381 GFHNEGPTWAPNGRVLMFFRQNAG-VGTKIYTIDITGRNERQLPTPHDASDPAWSALL 437


>gi|319899382|ref|YP_004159479.1| TolB protein [Bartonella clarridgeiae 73]
 gi|319403350|emb|CBI76909.1| TolB protein [Bartonella clarridgeiae 73]
          Length = 440

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 190/432 (43%), Positives = 280/432 (64%), Gaps = 10/432 (2%)

Query: 15  INLCLLLVL---IGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           I+ C   ++     GF  +S +A +K    +A+++P+ IA   FVS D LG K++ VV+ 
Sbjct: 8   ISSCFFFIVYLWFCGF--SSAYAQLKGTIANADFNPIPIAIADFVSHDSLGVKIAAVVAA 65

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+RS +F  + + SF +   NPD  P F DW  +  Q LVTG+V +E   RL+V+FRLW
Sbjct: 66  DLERSGLFLPLQKSSFPEISPNPDKQPNFSDWKKINTQGLVTGKVYREADGRLKVDFRLW 125

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           DV   +QI G++F+++   WR++AH ISD+IY  +TGEKG F++RI+F+ E+        
Sbjct: 126 DVLGNRQIKGQRFYTATERWRRVAHMISDEIYSKMTGEKGYFDTRIVFIDETGPHDARIK 185

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +MD+DGAN+ YL+   + +L  PRFSP +Q++ Y  Y       VYL    + +  +
Sbjct: 186 RLTIMDQDGANLTYLSDGSELVL-TPRFSPKRQEITYMAYGKNKTPHVYLQQMEVGQR-E 243

Query: 252 RIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            IG F +M +APRFS +G++ ++S +Q + + ++Y++DL++    RLT T  I+ SASYS
Sbjct: 244 LIGTFDNMTIAPRFSPDGQKVIMSLLQNNGSANLYTMDLRTRKMTRLTTTKAIDTSASYS 303

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD ++IVF SDR+GK Q+Y M  +GSD +RIS + E SY  P+WSP+GD IAFTK    +
Sbjct: 304 PDGNKIVFSSDRDGKPQIYTMNVDGSDLQRISSN-EGSYSTPIWSPRGDYIAFTKQFQGQ 362

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           F+IGVM  DG  ER+L    + + PTW+P+GR L+F RK  G  G+K+Y+ID+ GRNE L
Sbjct: 363 FSIGVMYPDGKGERILTTGFHNEGPTWAPNGRVLMFFRKNPG-AGAKIYTIDITGRNERL 421

Query: 431 INTPAYASDPQW 442
           + TP  ASDP W
Sbjct: 422 LPTPNDASDPAW 433


>gi|115526695|ref|YP_783606.1| translocation protein TolB [Rhodopseudomonas palustris BisA53]
 gi|115520642|gb|ABJ08626.1| transport system periplasmic component [Rhodopseudomonas palustris
           BisA53]
          Length = 450

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 184/418 (44%), Positives = 273/418 (65%), Gaps = 8/418 (1%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSEVVSKDLQRSDVFNLISQ 84
           P +  A  ++       +P+ IA   FV+      E+G  V++V++ +L+RS +F  I Q
Sbjct: 32  PHAALAQTRLQITEGTVAPMPIALPNFVAGTPADAEVGIGVAQVITNNLKRSGLFAPIDQ 91

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
            +F +KI+N D  P+F  W ++ AQ LVTGR+ ++   RL+ EFRLWDV   +Q+ G+++
Sbjct: 92  AAFIEKISNIDVPPQFPSWKTINAQALVTGRMTRQPDGRLKAEFRLWDVAAGQQLTGQQY 151

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
           F+SP  WR+IAH ISD IY+ +TGEKG F+SR++F+ E+         L +MD+DGAN+R
Sbjct: 152 FTSPEYWRRIAHIISDQIYERLTGEKGYFDSRVVFIDETGAKERRVKRLALMDQDGANVR 211

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           YLT   D +L  PRFSP  Q++ Y  +   D  RVYL +    +  + +GNF  M  +PR
Sbjct: 212 YLTRGSDLVL-TPRFSPTTQEITYMEFGQGDP-RVYLFNIETGQR-EIVGNFPGMSFSPR 268

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G+R ++S+Q+    +++ +DL+S +T RLT+T  I+ S SY+PD S+I FESDR G
Sbjct: 269 FSPDGQRIIMSMQQGGNSNLFVMDLRSKSTTRLTDTPAIDTSPSYAPDGSRICFESDRGG 328

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           K+Q+YVM + G   +RIS   E +Y  PVWSP+GD IAFTK  G +F+IG+MK DG+ ER
Sbjct: 329 KQQIYVMPAGGGGAQRISFG-EGNYSTPVWSPRGDYIAFTKQGGGQFSIGIMKPDGTGER 387

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           LL    + + PT++P+GR L+F R   G+ G  LY++D++GRNE  + TP +ASDP W
Sbjct: 388 LLTSGYHNEGPTFAPNGRVLMFFRDPGGNGGPSLYTVDISGRNEQKVPTPGFASDPAW 445


>gi|154252569|ref|YP_001413393.1| beta-propeller repeat-containing to-pal system protein TolB
           [Parvibaculum lavamentivorans DS-1]
 gi|189035985|sp|A7HV03|TOLB_PARL1 RecName: Full=Protein tolB; Flags: Precursor
 gi|154156519|gb|ABS63736.1| Tol-Pal system beta propeller repeat TolB [Parvibaculum
           lavamentivorans DS-1]
          Length = 446

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 189/435 (43%), Positives = 278/435 (63%), Gaps = 8/435 (1%)

Query: 9   EELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           + L  K+ L L++ +    F     A +++     N  P+ IA T FV    +G  +S V
Sbjct: 14  QSLMSKLILPLVMAVA---FALPARAALQIDITQGNVDPLPIAITDFVGEGSVGADMSAV 70

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +S +L+RS +F  + + SF +K+++ +  PRF DW  + +Q LVTG+   E   RLRVEF
Sbjct: 71  ISNNLERSGLFRPLPKASFIEKVSDINVQPRFGDWRVINSQALVTGQTRMEADGRLRVEF 130

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWDV   +Q+ G +FF++P +WR++AH ISD IY+ +TGE G F++RI++VSE+     
Sbjct: 131 RLWDVLGEQQLTGLQFFTTPDNWRRVAHLISDAIYKRLTGEDGYFDTRIVYVSETGPKNA 190

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L +MD+DG N R LT   ++++  PRFSPN Q++ Y  Y +    RVY++D    +
Sbjct: 191 RVKRLTIMDQDGHNPRMLTRG-NELVLTPRFSPNSQEITYLAYRNNQ-PRVYVLDIETGQ 248

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             + +G F  M  APRFS +G+R ++S+Q+    DIY++DL+S    RLTNT  I+ + S
Sbjct: 249 Q-EVVGEFPGMTFAPRFSPDGQRIIMSLQRGGNSDIYTMDLRSRQVVRLTNTAAIDTAPS 307

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           YSPD  QI FESDR G +Q+YVM ++GS+Q+RIS   + SY  PVWSP+GDLIAFTK +G
Sbjct: 308 YSPDGRQITFESDRGGSQQIYVMDASGSNQRRISF-GQGSYATPVWSPRGDLIAFTKITG 366

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRN 427
            +F IGVM+ DG+ ER+L +  + + PTW+P+GR L+F R+  G   G  L+S+D+ G N
Sbjct: 367 GRFVIGVMRPDGTGERVLTDGFHNEGPTWAPNGRVLMFFRETRGAQGGPSLWSVDVTGYN 426

Query: 428 ETLINTPAYASDPQW 442
           E    TP +ASDP W
Sbjct: 427 ERPSPTPTFASDPAW 441


>gi|254501514|ref|ZP_05113665.1| Tol-Pal system beta propeller repeat protein TolB [Labrenzia
           alexandrii DFL-11]
 gi|222437585|gb|EEE44264.1| Tol-Pal system beta propeller repeat protein TolB [Labrenzia
           alexandrii DFL-11]
          Length = 449

 Score =  368 bits (944), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 187/432 (43%), Positives = 273/432 (63%), Gaps = 8/432 (1%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI---DELGGKVSEVVSKDLQRS 76
            + L     P  + A V++     N  P+ IA  +F +     +L   ++ V++ DL+RS
Sbjct: 22  FVFLFAALTPLPVAALVEIDITQGNVEPLPIALPQFSAEGGDSKLAADMTAVIAADLKRS 81

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
            +FN +   SF QK  + +S PRF DW ++ AQ LVTG V K+   RLR EFRLWDV   
Sbjct: 82  GLFNPLDPASFIQKNMSVNSTPRFGDWRTISAQALVTGTVTKQADGRLRAEFRLWDVFAA 141

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q++G++F+++P +WR++AH I+D +Y+ ITGEKG F++RI+FV E+         L +M
Sbjct: 142 EQMLGQQFYTTPENWRRLAHIIADAVYERITGEKGYFDTRIVFVDETGPKDKRVKRLALM 201

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DGAN+RYLT   D ++  PRFSP  Q++ Y +Y   D   VYL++    +  + +GNF
Sbjct: 202 DQDGANVRYLT-RGDDLVLTPRFSPTSQEITYMSYAGADP-SVYLLNIETGQR-EIVGNF 258

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             M  APRFS +G+  ++S+Q+    +I+ +DL+S  T RLTN+  I+ S S+SPDS +I
Sbjct: 259 PGMTFAPRFSPDGQSVVMSLQQGSNANIFKMDLRSRQTTRLTNSAAIDTSPSFSPDSQRI 318

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VFESDR G +QLYVM ++G   +RIS      Y  PVWSP+GDLIAFTK    +F IGVM
Sbjct: 319 VFESDRGGSQQLYVMSASGGQAQRISFGP-GRYSTPVWSPRGDLIAFTKQHQGRFMIGVM 377

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTPA 435
           + DG  ER+L E  + + P WSP+GR L+F R   G + G +++++DL G NE  + TPA
Sbjct: 378 RPDGKGERVLTEGYHNEGPAWSPNGRVLVFFRDTPGANGGPQVWTVDLTGYNEQRLETPA 437

Query: 436 YASDPQWVGFMD 447
           +ASDP W   +D
Sbjct: 438 FASDPSWSPLID 449


>gi|307944545|ref|ZP_07659885.1| Tol-Pal system beta propeller repeat protein TolB [Roseibium sp.
           TrichSKD4]
 gi|307772294|gb|EFO31515.1| Tol-Pal system beta propeller repeat protein TolB [Roseibium sp.
           TrichSKD4]
          Length = 449

 Score =  367 bits (943), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 189/436 (43%), Positives = 271/436 (62%), Gaps = 10/436 (2%)

Query: 18  CLLLVLIGGFFPT--SIHAFVKVATNSANYSPVSIAFTKFVSID---ELGGKVSEVVSKD 72
           CL+LV   G         A +++     N  P+ IA   F +     +L   +  V++ D
Sbjct: 18  CLMLVAFAGLLTALGPARALIELDITQGNIEPLPIALPDFAAAGSDPKLASDMIGVITAD 77

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+RS +F  +   SF QK  + ++ PRF DW ++GAQ LV+G V K+   RLR EFRLWD
Sbjct: 78  LKRSGLFKPLDPASFIQKNMDVNTTPRFGDWRTIGAQALVSGTVSKQADGRLRAEFRLWD 137

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V   +Q++G++FF++  +WR++AH I+D IY+ +TGEKG F++RI+++ E+         
Sbjct: 138 VFASEQMLGQQFFTTEENWRRLAHIIADAIYERLTGEKGYFDTRIVYIDETGPKDKRVKR 197

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L +MD+DGAN+RYLT   D ++  PRFSP  Q++ Y +Y   D   VYL++    +  + 
Sbjct: 198 LAIMDQDGANVRYLTKG-DDLVLTPRFSPTSQEITYMSYSGADP-SVYLLNIETGQR-EI 254

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +GNF  M  APRFS +G+  ++S+Q+    +I+ +DL+S  T RLTNT  I+ S SYSPD
Sbjct: 255 VGNFPGMTFAPRFSPDGQSVVMSLQQGGNANIFKMDLRSRRTTRLTNTAAIDTSPSYSPD 314

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            S+IVFESDR G +QLYVM  N  +  RIS      Y  PVWSP+GDLIAFTK    +F 
Sbjct: 315 GSRIVFESDRGGTQQLYVMSGNDGNPLRISFGP-GRYSTPVWSPRGDLIAFTKMHQGRFM 373

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLI 431
           IGVMK DG  ER+L E  + + P WSP+GR L+F R   G + G +++++DL G NE  +
Sbjct: 374 IGVMKPDGKGERILTEGYHNEGPAWSPNGRVLVFFRDTPGANGGPQVWTVDLTGYNEQRV 433

Query: 432 NTPAYASDPQWVGFMD 447
           NTPA+ASDP W   +D
Sbjct: 434 NTPAFASDPSWSPLID 449


>gi|299134178|ref|ZP_07027371.1| Tol-Pal system beta propeller repeat protein TolB [Afipia sp.
           1NLS2]
 gi|298590925|gb|EFI51127.1| Tol-Pal system beta propeller repeat protein TolB [Afipia sp.
           1NLS2]
          Length = 447

 Score =  367 bits (943), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 186/411 (45%), Positives = 271/411 (65%), Gaps = 10/411 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVS----EVVSKDLQRSDVFNLISQDSFKQKI 91
           V+V  +  N+ P+ IA   FV+  +  G+VS     V++ +L+RS +F  I Q ++ ++I
Sbjct: 38  VRVQVDQGNFQPIPIAIPNFVAGGQGDGEVSAGIASVITNNLKRSGLFAPIDQAAYIERI 97

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
           +N D  P+F  W  + AQ LVTGR  ++   RL+ EFRLWDV   +Q+ G+++F+SP SW
Sbjct: 98  SNIDVPPQFPSWRQINAQALVTGRATRQSDGRLKAEFRLWDVPAAQQLTGQQYFTSPESW 157

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R++AH ISD IY+ +TGEKG F+SR++FV ES  +      L +MD+DGAN+RYLT   D
Sbjct: 158 RRVAHIISDQIYERLTGEKGYFDSRVVFVDESGPAQRRVKRLTIMDQDGANVRYLTRGAD 217

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +L  PRFSP+ Q++ Y  +   D  RVYL +    +  + +GNF  M  APRFS +G+R
Sbjct: 218 LVL-TPRFSPSTQEITYMEFGGGD-PRVYLFNVETGQR-EIVGNFPGMSFAPRFSPDGQR 274

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            ++S+Q+    ++Y +DL+S +T RLT+T  I+ S SY+PD S+I FESDR GK Q+YVM
Sbjct: 275 IIMSLQQGGNSNLYVMDLRSKSTTRLTDTPAIDTSPSYAPDGSRICFESDRGGKPQIYVM 334

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            + G   +RIS   + SY  PVWSP+GD IAFTK  G +FAIG+MK DGS ER+L    +
Sbjct: 335 AAGGGAAQRIS-FGDGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKPDGSGERILTSGFH 393

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            + PT++P+GR ++F R  D   G  L+++D++GRNE  + TP +ASDP W
Sbjct: 394 NEGPTFAPNGRVVMFFR--DLGAGPHLFTVDISGRNELQVPTPGFASDPAW 442


>gi|328542544|ref|YP_004302653.1| translocation protein TolB [polymorphum gilvum SL003B-26A1]
 gi|326412290|gb|ADZ69353.1| translocation protein TolB [Polymorphum gilvum SL003B-26A1]
          Length = 449

 Score =  365 bits (937), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 184/418 (44%), Positives = 272/418 (65%), Gaps = 8/418 (1%)

Query: 34  AFVKVATNSANYSPVSIAFTKFVSID---ELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
           A +++        P+ IA   F       +L  +++ V++ DL+RS +F  +   SF +K
Sbjct: 36  ALIEIDITQGQIEPMPIALPDFSPEGGDAQLARELTSVIAADLRRSGLFRPLDPASFIEK 95

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
             + ++ PRF DW ++GAQ LVTG V ++   RLR EFRLWDV   +Q++G++FF++P +
Sbjct: 96  NLSVNTAPRFGDWRTIGAQALVTGSVTRQADGRLRAEFRLWDVFASEQMLGQQFFTTPEN 155

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           WR++AH I+D IY+ +TGEKG F++RI+FV ES         L +MD+DGAN+RYLT   
Sbjct: 156 WRRLAHIIADAIYERLTGEKGYFDTRIVFVDESGPKSKRVKRLAIMDQDGANMRYLT-RG 214

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D+++  PRFSP  Q++ Y ++   D   V+L++    +  + +GNF  M  APRFS +G+
Sbjct: 215 DELVLTPRFSPTSQEITYMSFGSGDP-SVFLLNIETGQR-EIVGNFPGMTFAPRFSPDGQ 272

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R ++S+Q+    +I+ +DL+S AT RLTNT  I+ S SYSPD  QIVFESDR G +QLYV
Sbjct: 273 RVIMSLQQGGNANIFVMDLRSRATTRLTNTPAIDTSPSYSPDGRQIVFESDRGGSQQLYV 332

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M ++GS+ +RIS      Y  PVWSP+GDLIAFTK    +F IGVM+ DG  ER+L E  
Sbjct: 333 MNADGSNAQRISFGP-GRYSTPVWSPRGDLIAFTKQHQGRFMIGVMRPDGKGERILTEGY 391

Query: 391 NLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           + + P+W+P+GR L+F R   G + G +++++DL G NE  + TPA+ASDP W   +D
Sbjct: 392 HNEGPSWAPNGRVLVFFRDTPGANGGPQIWTVDLTGYNEQRVTTPAFASDPSWSPLID 449


>gi|49474671|ref|YP_032713.1| translocation protein TolB [Bartonella quintana str. Toulouse]
 gi|67461954|sp|Q6FYQ1|TOLB_BARQU RecName: Full=Protein tolB; Flags: Precursor
 gi|49240175|emb|CAF26641.1| tolB protein [Bartonella quintana str. Toulouse]
          Length = 440

 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 188/419 (44%), Positives = 284/419 (67%), Gaps = 5/419 (1%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +S+HA +K   +SA+++P+ IA T FVS D +G K++ VV+ DL+RS +F  + + SF +
Sbjct: 24  SSVHAKLKGTISSADFNPIPIAITDFVSNDSIGLKIAAVVTADLERSGLFLPLDKASFFE 83

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
           KI+NP+S P F  W  + AQ LVTG+VI+E   RLRV+FRLWDV   +Q+ G++F+++  
Sbjct: 84  KISNPNSQPHFFHWQKIRAQGLVTGQVIRENDGRLRVDFRLWDVFGHQQLKGRRFYTATE 143

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            WR++AH I+D+IY  +TGE G F++RI+F+ E+         L +MD+DGAN+ Y++  
Sbjct: 144 RWRRVAHMIADEIYSEMTGESGYFDTRIVFIDETGPQNARIKRLAIMDQDGANLIYISDG 203

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            + +L  PRFSP +Q++ Y  Y+      VYL    + +  + IG F++M +APRFSS+G
Sbjct: 204 SELVL-TPRFSPKRQEITYMAYERNQPPHVYLQQIEMGQR-ELIGTFKNMTIAPRFSSDG 261

Query: 270 KRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           ++ ++S +Q + + ++Y++DL++    RLT T  I+ SASYSPD +QIVF SDR GK Q+
Sbjct: 262 QKVIMSLLQNNGSANLYTMDLRTRMMTRLTTTSAIDTSASYSPDGTQIVFSSDRSGKPQI 321

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y M ++GS+ +RIS + E SY  P+WSP+GD IAFTK    +F+IGVM+ DG  ER+L  
Sbjct: 322 YTMNADGSNLQRISAN-EGSYSTPIWSPRGDYIAFTKQLEGQFSIGVMRPDGKGERILTT 380

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
             + + PTW+P+GR L+F RK  G  G K+Y+ID+ GRNE  + TP  ASDP W   ++
Sbjct: 381 GFHNEGPTWAPNGRVLMFFRKNPG-MGPKIYTIDITGRNERQLPTPNDASDPAWSPLLN 438


>gi|121601818|ref|YP_988482.1| translocation protein TolB [Bartonella bacilliformis KC583]
 gi|120613995|gb|ABM44596.1| Tol-Pal system beta propeller repeat protein TolB [Bartonella
           bacilliformis KC583]
          Length = 442

 Score =  364 bits (935), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 186/427 (43%), Positives = 281/427 (65%), Gaps = 8/427 (1%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           + + + L  G F    HA +K   + A+++P+ IA T F++ D +G K++ V++ DL+RS
Sbjct: 15  ISMSVCLFSGSF---AHAQLKGTISKADFNPIPIAITDFIAQDSIGQKIAAVIAADLERS 71

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
            +F  + +DSF +KIT+P+  P F +W  L AQ LVTG +  +   RLR++FRLWDV   
Sbjct: 72  GLFKTLDKDSFLEKITDPNGQPNFSNWQQLNAQGLVTGYIHSDSNGRLRIDFRLWDVFTH 131

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           KQI G++F+++   WR++AH ISD+IY  +TGE G F++R++FV E+         L +M
Sbjct: 132 KQIKGRRFYTTTEHWRRVAHMISDEIYSKMTGESGYFDTRVVFVDETGPFNARIKRLAIM 191

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DGAN+ YL+   + +L  PRFSP++Q++ Y  YD      VYL      +  + IG F
Sbjct: 192 DQDGANLTYLSNGTELVL-TPRFSPSRQEITYMAYDKHKTAHVYLQQIETGQR-ELIGTF 249

Query: 257 RSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +M +APRFS +G++ ++S+ KD  + ++Y++DL++    RLT T  I+ SASYSPD  Q
Sbjct: 250 DNMTIAPRFSPDGQKVIMSLLKDNGSANLYTMDLRTRTITRLTTTRAIDTSASYSPDGKQ 309

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           IVF SDR+GK Q+Y+M ++GS+  RIS + E SY  P WSP+GD IAFTK S  +F+IGV
Sbjct: 310 IVFSSDRDGKPQIYIMDADGSNPHRISAN-EGSYSTPTWSPRGDYIAFTKQSQGQFSIGV 368

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           M  +G  ERLL    + + PTW+P+GR L+F R ++ + G+++Y+ID+ GRNE  + TP 
Sbjct: 369 MHPNGQGERLLTTGFHNEGPTWAPNGRVLMFFR-QNANQGAQIYTIDITGRNERRLPTPN 427

Query: 436 YASDPQW 442
            ASDP W
Sbjct: 428 NASDPAW 434


>gi|163869131|ref|YP_001610370.1| translocation protein TolB [Bartonella tribocorum CIP 105476]
 gi|161018817|emb|CAK02375.1| TolB protein [Bartonella tribocorum CIP 105476]
          Length = 441

 Score =  364 bits (934), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 185/414 (44%), Positives = 282/414 (68%), Gaps = 5/414 (1%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +S++A +K   +SA+++P+ IA T F+S D +G K++ VV+ DL+RS +F  + +++F +
Sbjct: 25  SSVYAQLKGTISSADFNPIPIAITDFISNDSIGSKITAVVTADLERSGLFVPLDKENFFE 84

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
           KI+NP+  P F  W  + AQ LV G+V++E   RLRV+FRLWDV  ++Q+ G++F+++  
Sbjct: 85  KISNPNKQPHFASWQKIKAQGLVMGQVMREIDGRLRVDFRLWDVFGQRQLKGRRFYTATE 144

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            WR++AH I+D+IY  +TGE G F++RI+F+ E+         L +MD+DGAN+ Y++  
Sbjct: 145 RWRRVAHMIADEIYSEMTGESGYFDTRIVFIDETGPQNARIKRLAMMDQDGANLIYMSDG 204

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            + +L  PRFSP +Q++ Y  Y+D  +  VYL    + +  + IG F +M +APRFSS+G
Sbjct: 205 SELVL-TPRFSPKRQEMTYMAYEDNQVPHVYLQQIEMGQR-ELIGTFHNMTIAPRFSSDG 262

Query: 270 KRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           ++ ++S +Q D + ++Y++DL++    RLT T  I+ SASYSPD  QIVF SDR GK Q+
Sbjct: 263 QKVIMSLLQNDGSANLYTMDLRTRTMTRLTTTSAIDTSASYSPDGQQIVFSSDRSGKPQI 322

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y M ++GSD +RIS + E SY  P+WSP+GD IAFTK    +F+IGVM+ DG  ER+L  
Sbjct: 323 YKMNADGSDIQRISSN-EGSYSTPIWSPRGDYIAFTKQLSGQFSIGVMRPDGQGERILTT 381

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             + + PTW+P+GR L+F RK  G  G K+Y+ID+ GRNE  + TP  ASDP W
Sbjct: 382 GFHNEGPTWAPNGRVLMFFRKNPG-MGPKIYTIDITGRNERQLPTPNDASDPAW 434


>gi|240851219|ref|YP_002972622.1| translocation protein TolB [Bartonella grahamii as4aup]
 gi|240268342|gb|ACS51930.1| translocation protein TolB [Bartonella grahamii as4aup]
          Length = 441

 Score =  362 bits (930), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 188/426 (44%), Positives = 287/426 (67%), Gaps = 8/426 (1%)

Query: 21  LVLIGGFFPTSI---HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
            ++  G + +SI   +A +K   +SA+++P+ IA T F+S D +G K+S VV+ DL+RS 
Sbjct: 13  FIVTCGLWLSSISSGYAQLKGTISSADFNPIPIAITDFISNDSIGLKISAVVTADLERSG 72

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  +++++F + I+NP+  P F  W  + AQ LVTG+V++E   RLRV+FRLWDV  ++
Sbjct: 73  LFLPLNKENFLENISNPNKQPHFASWQKIKAQGLVTGQVMREIDGRLRVDFRLWDVFGQR 132

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           Q+ G++F+++   WR++AH I+D+IY  +TGE G F++RI+F+ E+         L +MD
Sbjct: 133 QLKGRRFYTATERWRRVAHMIADEIYSEMTGESGYFDTRIVFIDETGPQNARIKRLAMMD 192

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGAN+ Y++   + +L  PRFSP +Q++ Y  Y+D  +  VYL    + +  + IG F 
Sbjct: 193 QDGANLIYMSDGSELVL-TPRFSPKRQEMTYMAYEDNQVPHVYLQQIEMGQR-ELIGTFN 250

Query: 258 SMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +M +APRFSS+G++ ++S +Q D + ++Y++DL++    RLT T  I+ SASYSPD  QI
Sbjct: 251 NMTIAPRFSSDGQKVIMSLLQNDGSANLYTMDLRTRTMTRLTTTSAIDTSASYSPDGKQI 310

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR GK Q+Y M ++GSD +RIS + E SY  P+WSP+GD IAFTK    +F+IGVM
Sbjct: 311 VFSSDRSGKPQIYKMNADGSDIQRISSN-EGSYSTPIWSPRGDYIAFTKQLSGQFSIGVM 369

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           + DG  ER+L    + + PTW+P+GR L+F RK  G  G K+Y+ID+ GRNE  + TP  
Sbjct: 370 RPDGQGERILTTGFHNEGPTWAPNGRVLMFFRKNPG-MGPKIYTIDITGRNERQLPTPND 428

Query: 437 ASDPQW 442
           ASDP W
Sbjct: 429 ASDPAW 434


>gi|49476141|ref|YP_034182.1| translocation protein TolB [Bartonella henselae str. Houston-1]
 gi|67461959|sp|Q6G5R6|TOLB_BARHE RecName: Full=Protein tolB; Flags: Precursor
 gi|49238949|emb|CAF28247.1| tolB protein [Bartonella henselae str. Houston-1]
          Length = 443

 Score =  360 bits (923), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 187/428 (43%), Positives = 284/428 (66%), Gaps = 10/428 (2%)

Query: 21  LVLIGGFFPTS-----IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
            ++I  F+ TS     +HA +K   ++A+++P+ IA T F S D +G K++ VV+ DL+R
Sbjct: 13  FIVICAFWLTSFSSVPVHAQLKGTISTADFNPIPIAVTDFFSNDSIGLKIAAVVAADLER 72

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F  + + SF +KI+NP+  P F  W  + AQ LV G+VI+E   RLRV+FRLWDV  
Sbjct: 73  SGLFLPLDKASFLEKISNPNRQPHFPYWQEIKAQGLVIGQVIRENDGRLRVDFRLWDVFG 132

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           ++Q+ G++F+++   WR++AH I+D+IY  +TGE G F++RI+F+ E+         L +
Sbjct: 133 QRQLKGRRFYTATERWRRVAHMIADEIYSEMTGESGYFDTRIVFIDETGPQNARIKRLAI 192

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD+DGAN+ Y++   + +L  PRFSP +Q++ Y  Y+   +  VYL    + +  + IG 
Sbjct: 193 MDQDGANLIYISDGSELVL-TPRFSPKRQEITYMAYEHNQVPHVYLQQIEMGQR-ELIGT 250

Query: 256 FRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           F +M +APRFSS+G++ ++S +Q D + ++Y++DL++    RLT T  I+ SASYSPD +
Sbjct: 251 FNNMTIAPRFSSDGQKVIMSLLQNDGSANLYTMDLRTRMMTRLTTTSAIDTSASYSPDGT 310

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +IVF SDR GK Q+Y M ++GS+ +RIS + E SY  P+WSP+GD IAFTK    +F+IG
Sbjct: 311 KIVFSSDRSGKPQIYTMNADGSNLQRISSN-EGSYSTPIWSPRGDYIAFTKQLEGQFSIG 369

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           VM  DG  ER+L    + + PTW+P+GR L+F RK  G  G K+Y+ID+ GRNE  + TP
Sbjct: 370 VMHPDGQGERILTTGFHNEGPTWAPNGRVLMFFRKNPG-MGPKIYTIDITGRNERQLPTP 428

Query: 435 AYASDPQW 442
             ASDP W
Sbjct: 429 NDASDPAW 436


>gi|254473216|ref|ZP_05086614.1| Tol-Pal system beta propeller repeat protein TolB [Pseudovibrio sp.
           JE062]
 gi|211957937|gb|EEA93139.1| Tol-Pal system beta propeller repeat protein TolB [Pseudovibrio sp.
           JE062]
          Length = 454

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 184/419 (43%), Positives = 273/419 (65%), Gaps = 8/419 (1%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSI---DELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +A +++     N  P+ IA + F      +++ G++S+VV+ DLQRS +F  I   +  Q
Sbjct: 40  YALIELDITQGNVEPMPIAISPFAGSGLQEDVAGQISQVVAADLQRSGLFRPIDPAAHIQ 99

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
           +  N  ++PRF DW ++G+Q LVTG + ++   ++R EFRLWDV   +Q+IG++FF++P 
Sbjct: 100 QEMNVGTMPRFGDWRTIGSQALVTGSIAQQANGQIRAEFRLWDVFAGQQLIGQQFFTTPE 159

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           +WR++AH ISD IYQ +TGEKG F++R++F+ ES      +  L +MD+DGAN+RYLT  
Sbjct: 160 NWRRLAHIISDAIYQRLTGEKGYFDTRVVFIDESGPKDARRKRLAIMDQDGANVRYLT-R 218

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            D ++  PRFSP  Q+V Y +Y   +  +VYL +    +  + +GNF  M  APRFS +G
Sbjct: 219 GDDLVLTPRFSPVSQEVTYMSYVGGNP-QVYLFNIETGQR-EVLGNFPGMTFAPRFSPDG 276

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           ++ ++S+Q+    ++Y +DL++  T RLTNT  I+ S S+SPD  Q+VFESDR G +QLY
Sbjct: 277 QKVIMSLQQGSNANLYLMDLRTRRTTRLTNTAAIDTSPSFSPDGRQVVFESDRGGSQQLY 336

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           VM SNGS  +RIS      Y  PVWSP+GDLIAFTK    +F IGV++ DG  ER+L E 
Sbjct: 337 VMNSNGSGAERISFGP-GQYSTPVWSPRGDLIAFTKVHQGRFMIGVIRPDGKGERILTEG 395

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
            + + P WSP+GR L F R   G+ G  +++++DL G NE L+ TP +ASDP W   +D
Sbjct: 396 YHNEGPAWSPNGRVLTFFRDTVGEQGGPQVWTVDLTGYNEQLVQTPNFASDPAWSPLLD 454


>gi|330814394|ref|YP_004358633.1| TolB protein precursor [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487489|gb|AEA81894.1| TolB protein precursor [Candidatus Pelagibacter sp. IMCC9063]
          Length = 448

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 202/448 (45%), Positives = 280/448 (62%), Gaps = 23/448 (5%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF-----------VSIDELGGKV 65
           LCL+ + I  FF  S  A VK+     N  P+  A +KF           +   EL  K+
Sbjct: 4   LCLIFISIL-FFNHSAFAVVKIDITRGNLEPLPTAISKFYVDNPSKFSPELKALELDKKI 62

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
           SEV+S +L+RS +F++I   S+ Q      + P FQDW  + AQ++++G+++ + K RLR
Sbjct: 63  SEVISNNLKRSGLFSIIDPKSYIQSPRIAHAKPTFQDWALIKAQIMISGKLVIDEKKRLR 122

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           VEFRLWDV + K++ G   F++P SWR+IAH ISD IY+ +TGE G F++RI++V+ES  
Sbjct: 123 VEFRLWDVVNAKEMEGLALFATPNSWRRIAHIISDKIYERMTGELGYFDTRIIYVAESGP 182

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  L +MD+DGAN +YLT   ++++  PRF+P  Q V Y +Y  +++ RVYL++  
Sbjct: 183 KDQRIKKLAIMDQDGANNKYLTLG-NELVLTPRFNPASQMVTYMSY-FKNLPRVYLLNIE 240

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + +G+F  M  APRFS +GK+ ++S  KD   DIYS+D++S   E+LT+   I+ 
Sbjct: 241 TGMQ-ELVGDFPGMTFAPRFSPDGKKIIMSFAKDGNSDIYSMDIKSRVVEQLTSHPSIDT 299

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S SYS D SQI F SDR G +Q+YVM+S+GS  KRIS   +  Y  PVWSP+GDLIAFTK
Sbjct: 300 SPSYSSDGSQITFNSDRSGAQQIYVMKSDGSKAKRISFG-QGLYGTPVWSPRGDLIAFTK 358

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF---SRKKDGDTG----SKL 418
               KF IGVM+ DG+ ERLL E+   +AP+WSP+GR LIF   SR K   TG    S L
Sbjct: 359 IYRGKFYIGVMRSDGTGERLLTENYYQEAPSWSPNGRVLIFYRESRTKKSKTGFSTSSSL 418

Query: 419 YSIDLNGRNETLINTPAYASDPQWVGFM 446
           +SIDL G NE  I T   ASDP W G +
Sbjct: 419 WSIDLTGYNERKIKTLTDASDPAWSGLL 446


>gi|148258089|ref|YP_001242674.1| translocation protein TolB [Bradyrhizobium sp. BTAi1]
 gi|146410262|gb|ABQ38768.1| protein tolB precursor [Bradyrhizobium sp. BTAi1]
          Length = 462

 Score =  359 bits (921), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 181/410 (44%), Positives = 262/410 (63%), Gaps = 8/410 (1%)

Query: 37  KVATNSANYSPVSIAFTKFVSID----ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
           +V      ++P+ IA   FV       ++G  +S+V++ +L+RS +F  +   +F ++I 
Sbjct: 52  RVPILPGEFAPIPIAIPPFVPGGAGDADVGNGISQVITNNLKRSGLFAPVDPAAFPERIA 111

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
           N ++ P+F  W  L  Q LVTGR  ++   RL+ EFRLWD    +Q+ G+++ ++P  WR
Sbjct: 112 NFEAPPQFASWRPLALQGLVTGRATRQPDGRLKAEFRLWDPNSGQQLTGQQYVTAPEYWR 171

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +IAH ISD IY  +TGEKG F+SR++FV ES  S      L +MD+DGAN+RYLT   D 
Sbjct: 172 RIAHIISDQIYSQMTGEKGYFDSRVVFVDESGPSERRVKRLALMDQDGANVRYLTRGADL 231

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +L  PRFSP+ Q++ Y  +   D  +VYL++    +  + +GNF  M  +PRFS +G+R 
Sbjct: 232 VL-TPRFSPSSQEITYMEFGQGDP-KVYLLNIETGQR-EIVGNFPGMSFSPRFSPDGQRI 288

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           ++S+Q+    +++ +DL+S  T RLT+T  I+ S  YSPD +QI FESDR GK Q+YVM 
Sbjct: 289 ILSLQQGGNSNLFVMDLRSRTTTRLTDTPAIDTSPCYSPDGNQICFESDRGGKPQIYVMP 348

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +NG   +RIS   E SY  PVWSP+GD IAFTK  G +FAIG+MK DGS ER+L    + 
Sbjct: 349 ANGGGAQRISFG-EGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKTDGSGERILTSGFHN 407

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           + PT+SP+GR L+F R   G  G  LY+ID++GR E  + +P YASDP W
Sbjct: 408 EGPTFSPNGRVLMFFRDPGGTAGPSLYTIDVSGRFEQKVPSPGYASDPAW 457


>gi|154246985|ref|YP_001417943.1| beta-propeller repeat-containing to-pal system protein TolB
           [Xanthobacter autotrophicus Py2]
 gi|154161070|gb|ABS68286.1| Tol-Pal system beta propeller repeat TolB [Xanthobacter
           autotrophicus Py2]
          Length = 450

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 178/406 (43%), Positives = 265/406 (65%), Gaps = 5/406 (1%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
           ++      + P+ IA T  +   E+G  +S V++ DL+RS +F  I   +F ++ITNPD+
Sbjct: 45  RIDLTPGAFKPIPIAITDLLGEVEIGRNISGVITADLRRSGLFAPIDPKAFVEQITNPDT 104

Query: 97  IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            PRFQDW  + AQ L+TGRV ++   R +V FRLWDV   +Q+  ++F + P +WR+IAH
Sbjct: 105 -PRFQDWRVINAQALLTGRVTRQADGRFQVVFRLWDVFAGQQLAAQQFVAQPDNWRRIAH 163

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            I+D IY+ +TGEKG F++RI+FV ES         L +MD+DGAN+ YL+   D ++  
Sbjct: 164 IIADAIYEKMTGEKGYFDTRIVFVDESGPKERRVKRLAIMDQDGANVSYLS-RGDGLVLT 222

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PRFSP  Q++ Y +Y   D  +V+L++    +  + +GNF  M  +PRF+ +G+R ++S+
Sbjct: 223 PRFSPTSQEITYMSYGAGD-PKVFLLNIETGQR-EIVGNFPGMSFSPRFAPDGQRVIMSL 280

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           Q+    +I+ +DL+S AT RLT+T  I+ +  YSPD  QI FESDR G  Q+YVM ++GS
Sbjct: 281 QQGGNSNIFVMDLRSRATTRLTDTAAIDTAPCYSPDGRQICFESDRGGTSQIYVMNADGS 340

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             +RIS    A Y  PVWSP+GD IA+T+ +  +FAIGVM+ DGS ER+L E  + + PT
Sbjct: 341 GARRISFGN-ARYSTPVWSPKGDWIAYTRQAEGRFAIGVMRTDGSGERVLTEGYHNEGPT 399

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           ++P+GR ++F R   G +G  LYS+D+ G NE  + TP+YASDP W
Sbjct: 400 FAPNGRVIMFFRDPGGASGPSLYSVDVTGYNEQRVPTPSYASDPAW 445


>gi|300023930|ref|YP_003756541.1| Tol-Pal system beta propeller repeat protein TolB [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299525751|gb|ADJ24220.1| Tol-Pal system beta propeller repeat protein TolB [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 445

 Score =  353 bits (906), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 185/431 (42%), Positives = 272/431 (63%), Gaps = 9/431 (2%)

Query: 17  LCLLLVLIG--GFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID-ELGGKVSEVVSKDL 73
           +CL+ V +     F T   A +K        +P+ IA   FV  D +L   VS+V+  DL
Sbjct: 14  ICLIAVGLALDSGFATRAQAQLKGTQTEGTIAPIPIAIPLFVGDDPQLAANVSDVLQADL 73

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
           +RS +F  + + SF ++I + +++PRF DW S+ A  LV GR++  G  R+  EFRLWDV
Sbjct: 74  ERSGLFRPLDRASFLEQIRDVNAVPRFGDWRSVQADALVVGRIVNAGDGRVGAEFRLWDV 133

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
              KQ+ G++F +S  +WR+IAH I+D +Y+ +TGEKG F++R++FV E+  +      L
Sbjct: 134 ASGKQLAGQRFSTSAQNWRRIAHMIADSVYERLTGEKGYFDTRVVFVDETGPAQNRVKRL 193

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD+DGAN+R LT  ++ +L  PRFSP  Q++ Y +Y   D  +V++M+    R  + +
Sbjct: 194 AIMDQDGANVRLLTQGKELVL-TPRFSPTNQEITYMSY-TSDQPKVFIMNLESGRR-ELV 250

Query: 254 GNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           G+F  M  APRFS +G+R ++S+   D    IY +DL++    RLT +  I+ S SYSPD
Sbjct: 251 GDFPGMTFAPRFSPDGQRVVMSLGTPDGRSSIYEMDLRTRQPRRLTESSGIDTSPSYSPD 310

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             QIVFESDR+G ++LYVM ++GS    IS     SY  PVWSP+GD IAFT+ +G +F 
Sbjct: 311 GRQIVFESDRDGTQKLYVMNADGSGAHPISLGG-GSYSTPVWSPRGDYIAFTQQAGGRFL 369

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLI 431
           IGVMK DGS ER+L E  + + PTW+P+GR L+F R     +G  K+YS+D+ G NE  +
Sbjct: 370 IGVMKPDGSGERVLTEGFHNEGPTWAPNGRVLMFWRDSQSTSGGPKIYSVDITGFNERQV 429

Query: 432 NTPAYASDPQW 442
            TP++ASDP W
Sbjct: 430 TTPSFASDPAW 440


>gi|254455821|ref|ZP_05069250.1| Tol-Pal system beta propeller repeat protein TolB [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207082823|gb|EDZ60249.1| Tol-Pal system beta propeller repeat protein TolB [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 447

 Score =  346 bits (887), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 186/450 (41%), Positives = 276/450 (61%), Gaps = 28/450 (6%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIA-------------FTKFVSIDEL 61
           I +CL L++     P    A ++V     N +P+ +A             F K +  + +
Sbjct: 6   IFICLFLII-----PIKAFALIEVDITRGNLNPLPLAVSPLSIDENSKKSFEKILDKENI 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G ++S +V  +L+ S +FN +++D+F Q     +  PRF+DWN + AQ L+TG+V     
Sbjct: 61  GSEISIIVENNLRTSGLFNPLNKDAFLQAPDIANLKPRFEDWNLIKAQALITGKVAYI-D 119

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
           ++LRVEFRLWDV   K+++   F + P +WR++ H ISD IY+ +TGEKG F++RI++V+
Sbjct: 120 EKLRVEFRLWDVLAGKEMMALAFTTVPNNWRRVGHIISDKIYERLTGEKGYFDTRIIYVA 179

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E       K  L +MD+DGAN ++LT   ++++  PRF+P  Q V Y +Y  +++ RVYL
Sbjct: 180 EEGPKTQRKKKLAIMDQDGANNKFLTLG-NELVLTPRFNPTSQMVTYLSY-FKNLPRVYL 237

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +D       + +G+F  M  APRFS +GK+ ++S  KD   DI+++DL++   ER+TN  
Sbjct: 238 LDIETGTQ-EVVGDFPGMTFAPRFSPDGKKIIMSFAKDGKSDIFTMDLENRIVERITNHP 296

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I+ S SYSP+   I F SDR G +Q+Y+M+++GSD KRIS      Y  PVWSP+GDLI
Sbjct: 297 SIDTSPSYSPNGKFIAFNSDRSGYQQIYIMKNDGSDVKRISFG-NGIYGTPVWSPRGDLI 355

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-----GS 416
           AFTK    KF IGVM+ DG+ ERLL E+   +AP+WSP+GR LIF R+   +       +
Sbjct: 356 AFTKLHNGKFYIGVMRTDGTGERLLTENYYQEAPSWSPNGRVLIFYRETKTNAKGEGFSA 415

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           KL+SIDL G NE L+ TP  ASDP W   +
Sbjct: 416 KLWSIDLTGYNERLVTTPTDASDPSWSSLL 445


>gi|218462393|ref|ZP_03502484.1| translocation protein TolB [Rhizobium etli Kim 5]
          Length = 360

 Score =  345 bits (886), Expect = 7e-93,   Method: Compositional matrix adjust.
 Identities = 179/357 (50%), Positives = 247/357 (69%), Gaps = 4/357 (1%)

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF 145
           +F +K    D+ PRF+DW  + AQ LVTGRV KE   RLR EFRLWD    +Q+ G++FF
Sbjct: 3   AFIEKDLQSDASPRFEDWKVINAQALVTGRVTKEADGRLRAEFRLWDPFAGQQMTGQQFF 62

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
           + P +WR++AH I+D IY+ ITGE+G F++R++FVSES      K  L +MD+DG N+R 
Sbjct: 63  TQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQQRKRQLAIMDQDGFNVRM 122

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           LT   D +L  PRFSP++Q+V Y ++ ++   RVYL+     +  + +GNF  M  +PRF
Sbjct: 123 LTDGSDLVL-TPRFSPSRQEVTYMSFANQQP-RVYLLQLETGQR-EVVGNFPGMTFSPRF 179

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G++ ++S+Q++   +IY++DL+S  T RLT+T  I+ S SYSPD +++ FESDR GK
Sbjct: 180 SPDGQKVIMSLQQEGNSNIYTMDLRSRTTTRLTSTAAIDTSPSYSPDGARVSFESDRGGK 239

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK SG KF+IGVMK DGS ER+
Sbjct: 240 PQIYVMNADGSGQTRIS-FGDGSYSTPVWSPRGDLIAFTKQSGGKFSIGVMKPDGSGERI 298

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE L+ TP Y SDP W
Sbjct: 299 LTTGFHNEGPTWAPNGRVLMFFRQAAGSGGPQLYSIDLTGYNEQLVKTPTYGSDPAW 355


>gi|312115991|ref|YP_004013587.1| Tol-Pal system beta propeller repeat protein TolB [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311221120|gb|ADP72488.1| Tol-Pal system beta propeller repeat protein TolB [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 435

 Score =  344 bits (882), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 182/415 (43%), Positives = 260/415 (62%), Gaps = 6/415 (1%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
           P+   A V+V         + IA   F   D +  + ++VV+ DLQRS +F  +   +F 
Sbjct: 21  PSLASAQVEVEIRRGQVRAIPIAVADFTG-DPVAAETAQVVTADLQRSGLFRPVPNSAFI 79

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
           ++  N D+ PRFQDW  L  Q LV GRV   G  RLR E+RLWDV   + I G++FF   
Sbjct: 80  ERGANVDTPPRFQDWKVLNIQALVVGRVTDAGDGRLRGEYRLWDVVTGRHIAGEQFFIPR 139

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
            + R++AH I+D +Y+ +TGE+G F+SR++FV ES         L +MD+DGAN+R LT 
Sbjct: 140 NASRRLAHIIADAVYERLTGERGYFDSRVVFVDESGPKNQRVKRLAIMDQDGANLRLLTQ 199

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            R+ +L  PRF P  Q++ Y  Y + +  RV L +    +  + +G+F +M  APRFS  
Sbjct: 200 GRELVL-TPRFHPLSQEITYTAYRNGEP-RVMLRNIMTGQE-EVLGDFPNMSFAPRFSPQ 256

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G R ++S+Q+  + +I+ +D++S    RLT T  I+ +  YSPD  QIVFESDREGK+QL
Sbjct: 257 GDRVVMSLQEGGSSNIFELDVRSRRMMRLTQTNAIDTAPCYSPDGRQIVFESDREGKQQL 316

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           YVM ++GS Q+RI+   +  Y  PVWSP+GDLIAFTK     FAIGV++ DGS ER+L E
Sbjct: 317 YVMNADGSGQRRITFG-DGRYSTPVWSPRGDLIAFTKQVPGGFAIGVIRPDGSGERVLTE 375

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             + + PTWSP+GR ++F R+  G + G+KL+SIDL G NE  + TP++ SDP W
Sbjct: 376 GYHNEGPTWSPNGRVILFFRESGGANGGAKLFSIDLTGYNERQMPTPSFGSDPAW 430


>gi|146338269|ref|YP_001203317.1| protein tolB [Bradyrhizobium sp. ORS278]
 gi|146191075|emb|CAL75080.1| Protein tolB precursor [Bradyrhizobium sp. ORS278]
          Length = 376

 Score =  344 bits (882), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 172/375 (45%), Positives = 246/375 (65%), Gaps = 4/375 (1%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +++ +L+RS  F  +   +F ++ITN D +P+F  W  L  Q L+TGR  ++   RL V+
Sbjct: 1   MITNNLKRSGYFAPVDPAAFPERITNFDQLPQFNSWKPLSVQGLLTGRATRQSDGRLNVQ 60

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           FRLWDV   +Q   +++ ++P  WR+IAH ISD +Y ++ GEKG F+SR++FV ES  S 
Sbjct: 61  FRLWDVNSGQQSAAQQYVTAPEYWRRIAHIISDQVYTALLGEKGYFDSRVVFVDESGPSE 120

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L +MD+DGAN+RYLT   D +L  PRFSP+ Q++ Y  +   D  +VYL +    
Sbjct: 121 RRVKRLALMDQDGANVRYLTRGSDLVL-TPRFSPSSQEITYMEFGQGDP-KVYLFNIETG 178

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  + +GNF  M  +PRFS +G+R ++S+Q+    +++ +DL+S +T RLT+T  I+ S 
Sbjct: 179 QR-EIVGNFPGMSFSPRFSPDGQRIILSLQQGGNSNLFVMDLRSRSTTRLTDTPAIDTSP 237

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            YSPD SQI FESDR GK Q+YVM ++G + +RIS   E SY  PVWSP+GD IAFTK  
Sbjct: 238 CYSPDGSQICFESDRGGKPQIYVMSASGGNAQRISFG-EGSYSTPVWSPRGDYIAFTKQG 296

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G +FAIG+MK DGS ER+L    + + PT+SP+GR L+F R   G  G  LY+ID++GR 
Sbjct: 297 GGQFAIGIMKTDGSGERILTAGFHNEGPTFSPNGRVLMFFRDPGGTAGPSLYTIDVSGRF 356

Query: 428 ETLINTPAYASDPQW 442
           E  + TP YASDP W
Sbjct: 357 EQKVPTPGYASDPAW 371


>gi|71083302|ref|YP_266021.1| translocation protein TolB [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91762268|ref|ZP_01264233.1| translocation protein TolB precursor [Candidatus Pelagibacter
           ubique HTCC1002]
 gi|118574591|sp|Q4FN21|TOLB_PELUB RecName: Full=Protein tolB; Flags: Precursor
 gi|71062415|gb|AAZ21418.1| tolB protein [Candidatus Pelagibacter ubique HTCC1062]
 gi|91718070|gb|EAS84720.1| translocation protein TolB precursor [Candidatus Pelagibacter
           ubique HTCC1002]
          Length = 446

 Score =  339 bits (869), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 183/431 (42%), Positives = 267/431 (61%), Gaps = 23/431 (5%)

Query: 34  AFVKVATNSANYSPVSIA-------------FTKFVSIDELGGKVSEVVSKDLQRSDVFN 80
           A ++V     N +P+ +A             F K +  ++LG ++S VV  +L++S +FN
Sbjct: 19  ALIEVDITRGNLNPLPVAVSPLSIDNKSKENFKKILKQEDLGSEISIVVENNLRQSGLFN 78

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
            + +++F Q+    +  PRF+DWN + AQ LVTG+V     ++LRVEFRLWDV   K+++
Sbjct: 79  PLDKNAFLQEPDVANLKPRFEDWNLIKAQALVTGKVTFV-DEKLRVEFRLWDVLAGKEMM 137

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
              F + P++WR++ H I+D +Y+ +TGEKG F++RI++VSE          L +MD+DG
Sbjct: 138 ALAFTTVPSNWRRVGHIITDKVYERLTGEKGYFDTRIIYVSEEGPKTKRIKKLAIMDQDG 197

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N +YLT   ++++  PRFSP  Q V Y +Y   ++ RVYL+D       + +G+F  M 
Sbjct: 198 FNNKYLTLG-NELVLTPRFSPTNQMVTYLSYF-RNLPRVYLLDIETGMQ-EVVGDFPGMT 254

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            APRFS +GK+ ++S  KD   DIY++DL++   ER+TN   I+ S SYSPD  +I F S
Sbjct: 255 FAPRFSPDGKKIIMSFAKDGNSDIYTMDLENRIVERITNHPSIDTSPSYSPDGKKITFNS 314

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           DR G +Q+YVM SNG + KRIS      Y  PVWSP+GDLIAFTK    KF IGVM+ DG
Sbjct: 315 DRSGYQQIYVMDSNGKNVKRISFGN-GLYGTPVWSPRGDLIAFTKLHKGKFYIGVMRTDG 373

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-----GSKLYSIDLNGRNETLINTPA 435
           + ERLL E+   +AP+WSP+GR LIF R+   ++      +KL+SIDL G NE ++ T  
Sbjct: 374 TGERLLTENFYQEAPSWSPNGRVLIFYRETKTNSKGEGFSAKLWSIDLTGYNEKMVETET 433

Query: 436 YASDPQWVGFM 446
            ASDP W   +
Sbjct: 434 DASDPSWSSLL 444


>gi|262277490|ref|ZP_06055283.1| Tol-Pal system beta propeller repeat protein TolB [alpha
           proteobacterium HIMB114]
 gi|262224593|gb|EEY75052.1| Tol-Pal system beta propeller repeat protein TolB [alpha
           proteobacterium HIMB114]
          Length = 445

 Score =  338 bits (868), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 188/450 (41%), Positives = 277/450 (61%), Gaps = 26/450 (5%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID------------EL 61
           KI + L L+L    F +   A V +     N  P+  A + F  ID            +L
Sbjct: 3   KILVTLFLIL----FTSKSFAVVTIDITRGNLEPLPTAISNFY-IDNPEKFSEKIKSLKL 57

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
              + +V+  +L RS +F ++   S+ Q+       PRF+DW  + AQ++V+G++  + K
Sbjct: 58  EENLPKVIKGNLMRSGLFYVLDNKSYIQQPKLSHLKPRFEDWRLIKAQIMVSGKLRIDEK 117

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RLRVEFRLWDV   K+I G   F++P+SWR+IAH ISD IYQ +TGE+G F++RI++V+
Sbjct: 118 GRLRVEFRLWDVVSAKEIEGLALFATPSSWRRIAHIISDKIYQRLTGEEGYFDTRIIYVA 177

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES      +  L +MD+DGAN ++LT   ++++  PRFSPN + V Y +Y  +++ RVYL
Sbjct: 178 ESGPKTQREKKLAIMDQDGANNKFLTLG-NELVLTPRFSPNGKMVTYMSY-FKNLPRVYL 235

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++       + +G+F  M  APRFS +G++ ++S  +D   DIY++D++S   E++T+  
Sbjct: 236 LNIETG-IQEVVGDFPGMTFAPRFSPDGRKIIMSFARDGNSDIYTMDIESRRVEQITSNP 294

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I+ S S+SPD   IVF SDR G +Q+Y M+S+G   KRIS+ K   Y  PVWSP+GDLI
Sbjct: 295 AIDTSPSFSPDGRFIVFNSDRSGFQQIYTMRSDGRGVKRISRGK-GLYGTPVWSPRGDLI 353

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-----KKDGDTGS 416
           AFTK    KF IGVM+ DG+ ERLL ++   +AP+WSP+GR LIF R     KK   + +
Sbjct: 354 AFTKIHKGKFYIGVMRTDGTGERLLTQNFYQEAPSWSPNGRVLIFYRETAGGKKGQGSSA 413

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           KL++ID+ G NE  I TP  ASDP W G +
Sbjct: 414 KLWAIDITGYNEVKIKTPTDASDPSWSGLL 443


>gi|288957825|ref|YP_003448166.1| TolB protein [Azospirillum sp. B510]
 gi|288910133|dbj|BAI71622.1| TolB protein [Azospirillum sp. B510]
          Length = 450

 Score =  335 bits (859), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 178/444 (40%), Positives = 269/444 (60%), Gaps = 19/444 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVS 66
           L +      LL+ +G   P    A +++        P+ IA T F        ++G  +S
Sbjct: 9   LKLAGATGALLLSLGVAAPQEARAELRIDITRGVSEPLPIAITSFAGSGGRDAQMGADIS 68

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSI----PRFQDWNSLGAQVLVTGRVIKEGKD 122
           +V+S DL+RS +F  +    F Q    PD +    PR+QDW +LGAQ LV G     G  
Sbjct: 69  KVISDDLERSGLFKPLDPRGFLQ---TPDQLRSGEPRYQDWKALGAQALVAGNTTTGGDG 125

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           R++V+FRLWDV   + + G  + +SP  WR+IAH ++D IY+ +TGE G F++RI++V+E
Sbjct: 126 RMKVDFRLWDVAAGQYMQGLSYSASPQEWRRIAHIVADAIYKRLTGEDGYFDTRIVYVAE 185

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S  +   K  L +MD+D AN ++LT  +  +L  PRFSP  Q++ Y +Y ++   RVYL 
Sbjct: 186 SGPANARKKQLAIMDQDSANHQFLTDGQTLVL-TPRFSPTSQEITYMSYFNKKP-RVYLF 243

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +    R  + +G+F  M  APRFS +G + ++S+ ++   DIY++DL++    +LT+   
Sbjct: 244 NIDTGRQ-EVLGDFPGMTFAPRFSPDGNKVIMSMAQNGNTDIYTLDLRTRRQTQLTDAPG 302

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I+ + SYSPD  +IVFESDR G +QLY+M ++GS  KR++   E  Y  PVWSP+GDLIA
Sbjct: 303 IDTAPSYSPDGQRIVFESDRGGTQQLYIMGADGSGVKRLTF-GEGRYGTPVWSPRGDLIA 361

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG----SKL 418
           FT+  G  FA+GV++ DG+ ER+L E  +++ PTW+P+GR L+F +      G    +KL
Sbjct: 362 FTRQRGSSFAVGVIRPDGTGERILTEAFHVEGPTWAPNGRVLMFFKDLPSGDGRGRNAKL 421

Query: 419 YSIDLNGRNETLINTPAYASDPQW 442
           YSID+ G NE  ++TP  ASDP W
Sbjct: 422 YSIDITGANERRVSTPVDASDPAW 445


>gi|108755186|emb|CAK32578.1| periplasmic component of the Tol biopolymer transport system
           [uncultured organism]
          Length = 449

 Score =  335 bits (859), Expect = 8e-90,   Method: Compositional matrix adjust.
 Identities = 187/437 (42%), Positives = 273/437 (62%), Gaps = 20/437 (4%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDE--LGGKVSEVVSKD 72
           L ++ VL G +   S  A +++        P+ IA T F+  + DE   G  ++ VV+ D
Sbjct: 17  LAVIFVLGGSW---SASAELRIDITRGTVEPLPIAVTDFLGTAADETRFGRDIASVVAAD 73

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR--VIKEGKDRLRVEFRL 130
           L+RS +F  I   +F Q  T   ++PRF DW  + AQ LV GR  ++++G  RLRVEFRL
Sbjct: 74  LERSGLFLPIDSRAFIQTGTALSTLPRFADWRVINAQALVQGRTQIVEDG--RLRVEFRL 131

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           WDV   +Q++G ++ ++P  WR++AH I+D I++ +TGE G F++RI++++E        
Sbjct: 132 WDVFAEQQMVGFEYHTAPNGWRRVAHIIADAIFKRVTGEDGYFDTRIVYIAERGPQDRRI 191

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L +MD+DG N R+LT   + ++  PRFSP  Q++ Y +Y    + RVY+ +    R  
Sbjct: 192 KRLAIMDQDGENHRFLTDG-NTLVLTPRFSPTLQEIIYLSY-YSGVPRVYIFNIDTGRE- 248

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + +G+F  M  APRFS++GK  ++S+ KD   +IY++DL + A +RLT    I+ S S+ 
Sbjct: 249 EIVGDFPGMTFAPRFSADGKAVIMSMAKDGNSEIYTLDLSTRAVQRLTFHSAIDTSPSFD 308

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            +S ++VF SDR G +QLYVM  +GS+ +RIS  K   Y  PVWSP+GDLIAFTK    +
Sbjct: 309 ANSGKVVFNSDRGGTQQLYVMDGDGSNVRRISFGK-GRYATPVWSPRGDLIAFTKIHKGR 367

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-----KDGDTGSKLYSIDLNG 425
           F IGVM+ DGS+ERLL ED  ++APTW+P+GR L+F R+     K G   S+LYSIDL G
Sbjct: 368 FFIGVMRTDGSEERLLAEDFLVEAPTWAPNGRVLMFFRQEPSDAKGGGGRSRLYSIDLTG 427

Query: 426 RNETLINTPAYASDPQW 442
            NE  I TP  ASDP W
Sbjct: 428 YNEREIITPLDASDPAW 444


>gi|182677268|ref|YP_001831414.1| beta-propeller repeat-containing to-pal system protein TolB
           [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182633151|gb|ACB93925.1| Tol-Pal system beta propeller repeat protein TolB [Beijerinckia
           indica subsp. indica ATCC 9039]
          Length = 448

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 162/400 (40%), Positives = 249/400 (62%), Gaps = 4/400 (1%)

Query: 43  ANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
             + PVSIA T F          + ++  + +RS   N +   SF   ++NPD  P+   
Sbjct: 48  GEFKPVSIAVTTFAGDGSGPSHPTSIIINNFRRSVFLNPLDPKSFVSDVSNPDQAPQMDA 107

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI 162
           W ++ AQ +VTGR  +    RL+ EFRLWDV   +QI G+++ + P + R++AH ISD I
Sbjct: 108 WKTINAQFVVTGRSARSADGRLQTEFRLWDVTSGQQIAGQQYVTDPNNARRVAHIISDTI 167

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ITGEKG F++R++FV E+      +  L +MD+DGAN+RYLT   D ++  PRFSP+
Sbjct: 168 FSRITGEKGFFDTRVVFVDETGARDHRRKRLAIMDQDGANVRYLT-RGDDLVVTPRFSPS 226

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            Q + Y ++   D  +V L++    +  + +GNF  M  +PRFS +G++ ++S+ +  + 
Sbjct: 227 SQDITYMSFGAADP-KVLLLNIETGQR-EVVGNFPGMTFSPRFSPDGQKIVMSLSQGASS 284

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +++++DL+S  T RL+++  I+ S SYSPD +QIVFESDR G +Q+Y+M + G   +R+S
Sbjct: 285 NLFTMDLRSRNTTRLSDSSSIDTSPSYSPDGTQIVFESDRGGTQQIYMMSAAGGGTRRVS 344

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
              +  Y  PVWSP+GD IAFT+  G  F IGVMK DGS ER+L E  + + PTW+P+G 
Sbjct: 345 F-GDGRYSTPVWSPRGDYIAFTRQKGSSFGIGVMKPDGSGERILTEGFHNEGPTWAPNGL 403

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            ++F R   G  G +L+ +DL GR E  + TP++ASDP W
Sbjct: 404 YIMFFRDASGQGGPRLFMVDLYGRGEFPVPTPSFASDPAW 443


>gi|83592430|ref|YP_426182.1| translocation protein TolB [Rhodospirillum rubrum ATCC 11170]
 gi|118574596|sp|Q2RVF0|TOLB_RHORT RecName: Full=Protein tolB; Flags: Precursor
 gi|83575344|gb|ABC21895.1| TolB protein [Rhodospirillum rubrum ATCC 11170]
          Length = 443

 Score =  330 bits (845), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 172/400 (43%), Positives = 251/400 (62%), Gaps = 9/400 (2%)

Query: 47  PVSIAFTKFVSIDE----LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P+ IA   F   D     +G  V  VVS DLQ S +F ++   ++ Q + N    P+F D
Sbjct: 44  PMPIAIPVFGGTDAQSSAMGRDVVGVVSNDLQGSGLFRVLDPAAYIQSLPNLAVQPQFAD 103

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI 162
           W ++ AQ LV G V  +G  RLRV FRLWDV   +Q++G+ F +   +WR+++H I+D+I
Sbjct: 104 WRAINAQALVQGEVQPQGDGRLRVAFRLWDVFSGQQVVGRAFLTQGDNWRRVSHIIADEI 163

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y++ITGE+G F++R+++V+E+         L +MD+DGAN R LT     +L  PRFSP 
Sbjct: 164 YKAITGEEGYFDTRVVYVAETGPKTNRVKKLAIMDQDGANQRNLTNGESMVL-TPRFSPT 222

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            Q++ Y +Y +  + RVYL +    R  + +G+F  M  APRFS +G + ++S+  D   
Sbjct: 223 AQEITYLSYYNS-VPRVYLFNIETGRR-ELLGDFPGMTFAPRFSPDGNKVIMSMALDGNT 280

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +IY +DL++  + RLTN   I+ S SY+PD  QI F SDR G +Q+YVM ++GS  +RIS
Sbjct: 281 EIYEMDLRTRRSSRLTNHPSIDTSPSYAPDGRQITFNSDRGGAQQIYVMNADGSGVQRIS 340

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
              +  Y  PVWSP+GDLIAFTK  G +F IG M+ DGS E++L E   ++ PTW+P+GR
Sbjct: 341 FG-DGRYATPVWSPRGDLIAFTKLKGGRFFIGAMRPDGSGEKILTEGFLVEGPTWAPNGR 399

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            L+F R +D +  + L+SID+ G NE  I+TP  ASDP W
Sbjct: 400 VLMFFR-QDPNGRTTLHSIDVTGYNERQISTPTEASDPAW 438


>gi|188584485|ref|YP_001927930.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           populi BJ001]
 gi|179347983|gb|ACB83395.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           populi BJ001]
          Length = 446

 Score =  325 bits (833), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 174/415 (41%), Positives = 249/415 (60%), Gaps = 7/415 (1%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           T   A +++   S  + P+ IA   F     LG  VS V++ +L+RS  F  + +  F +
Sbjct: 30  TPARAQLQLRIGSGAFQPMPIAVADFAGDASLGTLVSSVITNNLRRSGYFTPLEKGRFPE 89

Query: 90  KITNP--DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
              NP  D+ P F+ W   G Q LVTGRV ++   RL V FRLWDV   +QI G+++ + 
Sbjct: 90  ---NPSFDAAPNFEAWKGAGVQALVTGRVGRDASGRLTVAFRLWDVASGQQITGQQYGTD 146

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
            A+ R+  H +SD +Y  +TG    F+SR+ FV ES      +  L VMD+DGAN+R LT
Sbjct: 147 VANARRTGHLVSDAVYTKVTGLGPWFDSRVAFVDESGPKENRRKRLMVMDQDGANVRALT 206

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              D  +  PR+SP  Q +A+ T       +V ++D    +  + +GNF SM  +PRFS 
Sbjct: 207 GGGDVSVVAPRYSPAGQDIAFMTQAPGQQPKVQMIDLETGKR-QTVGNFASMSASPRFSP 265

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+R ++SVQ+    DI +VDL S A   +T  L I+ S SYSPD SQIVFESDR G +Q
Sbjct: 266 DGRRLVMSVQQGGNADIVTVDLGSKAQTPVTQGLAIDTSPSYSPDGSQIVFESDRGGSQQ 325

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +YVM ++GS+ +R+S   E S   P WSP+GDLIAFT+     FAI VMK DGS ER+L 
Sbjct: 326 IYVMGADGSNPRRLSFG-EGSASQPAWSPRGDLIAFTRQRKGGFAICVMKPDGSGERVLT 384

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           E  + ++PT++P+G+ ++F R   G  G KLY +D+ G+ E  + TP++ASDP W
Sbjct: 385 EGFHNESPTFAPNGQYVMFFRDPGGQGGGKLYMVDITGKVEQPVPTPSFASDPTW 439


>gi|295688123|ref|YP_003591816.1| Tol-Pal system beta propeller repeat-containing protein Tolb
           [Caulobacter segnis ATCC 21756]
 gi|295430026|gb|ADG09198.1| Tol-Pal system beta propeller repeat protein TolB [Caulobacter
           segnis ATCC 21756]
          Length = 443

 Score =  322 bits (825), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 177/447 (39%), Positives = 266/447 (59%), Gaps = 15/447 (3%)

Query: 7   IAEELNMKINLCLLLV---LIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGG 63
           + +E  M++   LL+V   + G  F T   A ++V  N+    P+ IA   F      G 
Sbjct: 6   VKKETPMRLRALLLMVAALMSGAAFVTPAAAQIEVDINAGAVKPMPIAIPAFSGATR-GA 64

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           ++++V+S +L+RS +F  ++      K+++ +  PRF DW + GAQ L+ G+V       
Sbjct: 65  EIAQVISGNLERSGLFQPLNVSGVADKLSDVNIQPRFPDWQTTGAQALINGQVTVGPDGG 124

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           LRV+FRLWDV  ++Q++G +F S+P +WR++AH ISD +Y+ +TGEKG F++R+ FV+ES
Sbjct: 125 LRVDFRLWDVFSQQQLLGLQFSSTPDNWRRVAHKISDAVYERLTGEKGYFDTRVAFVAES 184

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                    L +MD+DGAN +YLT     I+  PRFS   Q++ Y          +YL++
Sbjct: 185 GPKLNRIKRLAIMDQDGANPQYLT-DGSYIVMTPRFSSTSQELTYMALRPTGS-SIYLLN 242

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R  + +G F  M+ APRFS +G +   SV+K+   DIY +DL+S +T R+T    I
Sbjct: 243 LETSRQ-ETVGKFPGMVFAPRFSPDGGKVAFSVEKNGNSDIYVMDLRSRSTTRITTDPSI 301

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           + S S+SPD ++IVF SDR G+ Q+YVM ++GS  +RIS      Y  PVWSP+GD IAF
Sbjct: 302 DTSPSFSPDGTKIVFNSDRGGQAQIYVMNTDGSGVRRISFGG-GRYTTPVWSPRGDFIAF 360

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           TK +G +F IGVM+ DG  ERLL      + PTW+P+GR L+F R+  G    KL+++D+
Sbjct: 361 TKQTGGQFHIGVMRPDGGDERLLTTSYLDEGPTWAPNGRVLMFFREGGGGN-PKLWTVDI 419

Query: 424 NGRNETLINTPAY---ASDPQWVGFMD 447
            GR   ++   AY    SDP W   +D
Sbjct: 420 TGR---ILRPAAYNGSGSDPAWSPLLD 443


>gi|296535985|ref|ZP_06898130.1| tol-Pal system beta propeller repeat protein TolB [Roseomonas
           cervicalis ATCC 49957]
 gi|296263689|gb|EFH10169.1| tol-Pal system beta propeller repeat protein TolB [Roseomonas
           cervicalis ATCC 49957]
          Length = 434

 Score =  322 bits (824), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 173/410 (42%), Positives = 252/410 (61%), Gaps = 15/410 (3%)

Query: 43  ANYSPVSIAFTKFVS----IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP 98
           A   P+ IA   F        +LG  ++ V++ +L+ S +F  + + ++ Q      + P
Sbjct: 24  ARTDPIPIALPDFAGGSPQAQQLGQNITRVIANNLRNSGLFRPVERGAYIQTPEAAAAAP 83

Query: 99  RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI 158
           RFQDW  +GAQ LVTGR   +G DR R+EFRLW+V   +Q+ G  + ++ A+WR+IAH I
Sbjct: 84  RFQDWRVIGAQALVTGRAEPQG-DRARIEFRLWEVSSEQQLQGTAYTANAANWRQIAHVI 142

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           SD IY+ + GEKG F++RI++V+ES         L +MD+DG N R+LT    Q+L  PR
Sbjct: 143 SDVIYERMLGEKGYFDTRIVYVAESGPRDRRTRRLAIMDQDGENHRFLTDGSFQVL-TPR 201

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F PN +++A+ +Y +    RVYL +    R  + +GNF+ M L+PRFS +G+  ++S  +
Sbjct: 202 FHPNARQIAFMSYFNNQP-RVYLFNLDSGRQ-EVLGNFQGMTLSPRFSPDGRSVVLSSAR 259

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
               +IY VDL S    +LT+   +++S SYSPD SQIVF SDR G +QLYVM + G   
Sbjct: 260 GGDANIYVVDLASRRERQLTSGGGLDVSPSYSPDGSQIVFNSDRGGDQQLYVMDAGGGGA 319

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           +RIS      Y  PVWSP+GDLIAFT+ SG +F IGVM+ DGS ER+L E  +++ P+++
Sbjct: 320 RRISFGN-GRYATPVWSPRGDLIAFTRISGGRFGIGVMRPDGSGERILSEGWSMEGPSFA 378

Query: 399 PSGRSLIFSRK------KDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           P+GR L F R+      + G   ++L  ID+ G NE  I TP  A+DP W
Sbjct: 379 PNGRVLAFYRESQARDARGGGYSARLSMIDIAGFNERQIVTPTDATDPSW 428


>gi|254564124|ref|YP_003071219.1| protein tolB [Methylobacterium extorquens DM4]
 gi|254271402|emb|CAX27415.1| protein tolB precursor [Methylobacterium extorquens DM4]
          Length = 446

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 171/412 (41%), Positives = 248/412 (60%), Gaps = 7/412 (1%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
            A +++   S  + P+ IA   F     LG  V+ V++ +L+RS  F  + +  F +   
Sbjct: 33  RAQLQLRIGSGAFQPMPIAVADFAGDASLGTLVASVITNNLRRSGYFTPLEKGRFPE--- 89

Query: 93  NP--DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
           NP  D+ P F+ W   G Q LVTGRV ++   RL V FRLWDV   +QI G+++ +  A+
Sbjct: 90  NPSFDAAPNFEAWKGAGVQALVTGRVGRDASGRLTVAFRLWDVASGQQITGQQYGTDVAN 149

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R+  H +SD +Y  +TG    F+SR+ FV ES      +  L VMD+DGAN+R LT   
Sbjct: 150 ARRTGHLVSDAVYTKVTGLGPWFDSRVAFVDESGPKENRRKRLMVMDQDGANVRALTGGG 209

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D  +  PR+SP  Q +A+ T       +V ++D    +  + +GNF SM  +PRFS +G+
Sbjct: 210 DVSVVAPRYSPAGQDIAFMTQAPGQQPKVQMIDLETGKR-QTVGNFASMSASPRFSPDGR 268

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R ++SVQ+    DI +VDL S A   +T  L I+ S SY+PD SQIVFESDR G +Q+YV
Sbjct: 269 RLVMSVQQGGNADIVTVDLASKAQTPVTQGLAIDTSPSYAPDGSQIVFESDRGGSQQIYV 328

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M ++GS+ +R+S   E S   P WSP+GDLIAFT+     FAI VMK DGS ER+L E  
Sbjct: 329 MGADGSNPRRLSFG-EGSASQPAWSPRGDLIAFTRQRKGGFAICVMKPDGSGERVLTEGF 387

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           + ++PT++P+G+ ++F R   G  G KLY +D+ G+ E  + TP++ASDP W
Sbjct: 388 HNESPTFAPNGQYVMFFRDPGGQGGGKLYMVDITGKVEQPVPTPSFASDPTW 439


>gi|144897899|emb|CAM74763.1| TOLB PROTEIN PRECURSOR [Magnetospirillum gryphiswaldense MSR-1]
          Length = 451

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 177/447 (39%), Positives = 262/447 (58%), Gaps = 22/447 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSEV 68
           ++I L  L  ++G     +  A V++     N  P+ IA  +         + G  ++ V
Sbjct: 5   IRIALVGLFAVLGLLAAPAAMAEVRIDITRGNMKPLPIAVPELFGAQPAEVQAGRDIARV 64

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V+ DL+RS +F  I Q +F Q   +  + PRF DW  + A+ LV+G++   G   L +EF
Sbjct: 65  VAADLERSGLFKPIDQRAFIQNAASLQAGPRFADWRQINAEALVSGKIEVSGDGDLMIEF 124

Query: 129 RLWDVKDRKQIIGKKF-------FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
           RLWDV    Q+IG ++         +P  WR+ AH I+D IY+ +TGE G F+++++++S
Sbjct: 125 RLWDVFSETQMIGTRYNIAGKDIRRNPNLWRRAAHQIADAIYKRVTGEDGYFDTQLIYIS 184

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES      K  L +MD+DG N R+LT   D +L  PRFSP  +++ Y +Y      RVY+
Sbjct: 185 ESGPKNDRKKRLAIMDQDGENHRFLTSGEDLVL-TPRFSPTAREITYMSYF-RGTPRVYI 242

Query: 242 MDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +  +ID A + + G+F  M  APRFS +G + ++S+ +D   +IY ++L +    RLTN 
Sbjct: 243 L--QIDTARRELLGDFPGMTFAPRFSPDGNKVIMSLSQDGNTEIYEMNLLTRQKARLTNH 300

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+ S SYSPDS+++VF SDR G +QLY M ++GS   RIS   +  Y  PVWSP+GDL
Sbjct: 301 PSIDTSPSYSPDSTRVVFNSDRGGAQQLYTMNADGSGVARISF-GDGRYATPVWSPRGDL 359

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-----G 415
           IAFTK  G +F IGVM+ DGS ERLL +   ++ PTW+P+GR L F ++   D+      
Sbjct: 360 IAFTKMKGGEFFIGVMRPDGSDERLLAQGYLVEGPTWAPNGRVLAFWKETASDSQGRGGT 419

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQW 442
           +KLY+IDL G NE  + TP   SDP W
Sbjct: 420 AKLYTIDLTGFNERQVITPLDGSDPAW 446


>gi|163854156|ref|YP_001642199.1| beta-propeller repeat-containing to-pal system protein TolB
           [Methylobacterium extorquens PA1]
 gi|218533101|ref|YP_002423917.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           chloromethanicum CM4]
 gi|240141615|ref|YP_002966095.1| protein tolB precursor [Methylobacterium extorquens AM1]
 gi|163665761|gb|ABY33128.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           extorquens PA1]
 gi|218525404|gb|ACK85989.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           chloromethanicum CM4]
 gi|240011592|gb|ACS42818.1| protein tolB precursor [Methylobacterium extorquens AM1]
          Length = 446

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 170/412 (41%), Positives = 248/412 (60%), Gaps = 7/412 (1%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
            A +++   S  + P+ IA   F     LG  V+ V++ +L+RS  F  + +  F +   
Sbjct: 33  RAQLQLRIGSGAFQPMPIAVADFAGDASLGTLVASVITNNLRRSGYFTPLEKGRFPE--- 89

Query: 93  NP--DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
           NP  D+ P F+ W   G Q LVTGRV ++   RL V FRLWDV   +QI G+++ +  A+
Sbjct: 90  NPSFDAAPNFEAWKGAGVQALVTGRVGRDASGRLTVAFRLWDVASGQQITGQQYGTDVAN 149

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R+  H +SD +Y  +TG    F+SR+ FV ES      +  L VMD+DGAN+R LT   
Sbjct: 150 ARRTGHLVSDAVYTKVTGLGPWFDSRVAFVDESGPKENRRKRLMVMDQDGANVRALTGGG 209

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D  +  PR+SP  Q +A+ T       +V ++D    +  + +GNF SM  +PRFS +G+
Sbjct: 210 DVSVVAPRYSPAGQDIAFMTQAPGQQPKVQMIDLETGKR-QTVGNFASMSASPRFSPDGR 268

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R ++SVQ+    DI +VD+ S A   +T  L I+ S SY+PD SQIVFESDR G +Q+YV
Sbjct: 269 RLVMSVQQGGNADIVTVDIASKAQTPVTQGLAIDTSPSYAPDGSQIVFESDRGGSQQIYV 328

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M ++GS+ +R+S   E S   P WSP+GDLIAFT+     FAI VMK DGS ER+L E  
Sbjct: 329 MGADGSNPRRLSFG-EGSASQPAWSPRGDLIAFTRQRKGGFAICVMKPDGSGERVLTEGF 387

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           + ++PT++P+G+ ++F R   G  G KLY +D+ G+ E  + TP++ASDP W
Sbjct: 388 HNESPTFAPNGQYVMFFRDPGGQGGGKLYMVDITGKVEQPVPTPSFASDPTW 439


>gi|323138231|ref|ZP_08073303.1| Tol-Pal system beta propeller repeat protein TolB [Methylocystis
           sp. ATCC 49242]
 gi|322396483|gb|EFX99012.1| Tol-Pal system beta propeller repeat protein TolB [Methylocystis
           sp. ATCC 49242]
          Length = 435

 Score =  319 bits (817), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 164/422 (38%), Positives = 258/422 (61%), Gaps = 9/422 (2%)

Query: 27  FFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDS 86
           F P S    +++      + P+++A   F+  DE    ++ V   + +RS     I   +
Sbjct: 22  FTPASAGRIIEL--KGGGFQPINVAVAPFIG-DEAARTITSVTMNNFKRSVFLKPIDGAT 78

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS 146
             +   +PD  P    + ++ AQ ++TGR  + G  RL+ EFRL+DV   +Q+ G+++ +
Sbjct: 79  VGED-GSPDQTPNLDAYKAINAQFVLTGRSQRTGDGRLKTEFRLFDVTTGEQVAGQQYVT 137

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
             A+ R++AH +SD ++  +TGEKG F++R++FV ES      +  L +MD+DGAN+RYL
Sbjct: 138 ESANMRRVAHLLSDAVFTRVTGEKGFFDTRVVFVDESGSKDKRRKRLAMMDQDGANVRYL 197

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRF 265
           T   D ++  PRFSP+   V Y  ++ +   +V LM+  I+ + + + GNF  M  +PRF
Sbjct: 198 TRG-DDLVVTPRFSPSSLDVTYMAFNSDGEPKVLLMN--IESSQREVVGNFPGMTFSPRF 254

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G++ ++S+ +  + ++Y++DL+S  T RLT+T  I+ + S+SPD S+I FESDR G 
Sbjct: 255 SPDGQKIIMSLSQGSSTNLYTMDLRSRTTTRLTDTSAIDTAPSFSPDGSRIAFESDRGGS 314

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +Q+YVM ++G + KRIS      Y  PVWSP+GD IAFTK +G  F+IGVMK DGS ER+
Sbjct: 315 QQIYVMGAHGGEAKRISFGG-GRYSTPVWSPKGDYIAFTKQNGGNFSIGVMKTDGSGERI 373

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
           L E  + + PTW+P+G  L+F R+  G  G K+Y +D+ GR E  + TP YASDP W   
Sbjct: 374 LTEGFHNEGPTWAPNGLFLMFFRESGGAGGPKIYMVDVFGRTELQVPTPGYASDPAWGPL 433

Query: 446 MD 447
            D
Sbjct: 434 QD 435


>gi|197106553|ref|YP_002131930.1| periplasmic component of the Tol biopolymer transport system
           [Phenylobacterium zucineum HLK1]
 gi|196479973|gb|ACG79501.1| periplasmic component of the Tol biopolymer transport system
           [Phenylobacterium zucineum HLK1]
          Length = 430

 Score =  319 bits (817), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 180/428 (42%), Positives = 257/428 (60%), Gaps = 8/428 (1%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           + L L  +   G       A ++V  N  +  P+ IA   F    + G  +++V+S +LQ
Sbjct: 6   LMLALACLFAAGLTVQPARAEIEVNVNRGDVQPLPIAVPAFGG--QQGADIAQVISANLQ 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           RS +F  +   +F ++  N    PRF DW  + AQ LV G+V  EG  RLRV+FRLWDV 
Sbjct: 64  RSGLFQPLDPAAFIERDVNIAVQPRFADWKQINAQALVNGQVTVEGG-RLRVDFRLWDVF 122

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             +Q++G +F SSP +WR++AH ISD +Y+ +TGEKG F++R++FV+ES   G     L 
Sbjct: 123 AEQQLLGLQFTSSPENWRRVAHKISDAVYERLTGEKGYFDTRVVFVAESGPRGKRVKRLA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD+DGAN  YLT     I+  PRFS N Q++ Y +    D   ++L +    R  + +G
Sbjct: 183 IMDQDGANPSYLT-DGSYIVMTPRFSSNSQEITYMSL-RPDGSSIWLFNLETGRR-ESLG 239

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           NF+ M+ APRFS +G R   SV++    DIY + L S ++ RLT+   I+ S S+SPD  
Sbjct: 240 NFQGMVFAPRFSPDGGRVAFSVERGGNSDIYVMSLSSRSSTRLTSDPSIDTSPSFSPDGQ 299

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +IVF SDR G  QLYVM ++GS+ +RIS   +  Y  PVWSP G+ IAFTK +G +F IG
Sbjct: 300 RIVFNSDRSGSAQLYVMGADGSNPRRISF-GQGRYTTPVWSPTGEFIAFTKQTGGQFHIG 358

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           VM+ DGS ERLL      + PTW+P+GR L+FSR+  G    +L+S+D+ GR    +  P
Sbjct: 359 VMRADGSDERLLTSSYLDEGPTWAPNGRVLMFSRETPGGA-PRLWSVDVTGRVLQPMPYP 417

Query: 435 AYASDPQW 442
              SDP W
Sbjct: 418 GSGSDPAW 425


>gi|23015569|ref|ZP_00055341.1| COG0823: Periplasmic component of the Tol biopolymer transport
           system [Magnetospirillum magnetotacticum MS-1]
          Length = 444

 Score =  319 bits (817), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 171/431 (39%), Positives = 255/431 (59%), Gaps = 13/431 (3%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI----DELGGKVSEVVSKDLQRS 76
            V++G        A V++        P+ IA  +F       + +G  ++ VVS DL+RS
Sbjct: 13  FVILGVVAALPASAEVRIDITRGQMKPLPIAIPEFAGASAQDNRVGADIARVVSADLERS 72

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
            +F  I   +F Q   +  + PRF DW ++ A+ LV+G++      R+RVEFRLWDV + 
Sbjct: 73  GLFKPIDPKAFIQNAASLQAGPRFPDWKAINAEALVSGKIESGADGRIRVEFRLWDVFNE 132

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
             + G    +SPA WR+++H ++D IY+ +TGE G F+++I++++ES      K  L +M
Sbjct: 133 AYMTGWTLSASPADWRRLSHKVADAIYKRVTGEDGYFDTQIVYIAESGPKNDRKKRLSIM 192

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DG N R+LT   + +L  PRFSP+ +++ Y +Y  + + RVY+ +    R  + +GNF
Sbjct: 193 DQDGENHRFLTDGSELVL-TPRFSPSAREITYLSY-FKGVPRVYIFNLDTGRR-ESLGNF 249

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             M  APRFS +G + + S+ +    +IY ++L +    +LT    I+ + SYSPD  QI
Sbjct: 250 PGMTFAPRFSPDGNKVIFSMAESGNTEIYEMNLLTRQKRQLTYNPAIDTAPSYSPDGQQI 309

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VFESDR G +QLYVM ++G +  RIS   +  Y  PVWSP+GDLIAFTK  G +F IGVM
Sbjct: 310 VFESDRGGGQQLYVMGADGGNATRISFG-DGRYATPVWSPRGDLIAFTKQKGGQFFIGVM 368

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-----KLYSIDLNGRNETLI 431
           + DGS ERLL E   ++ PTW+P+GR L F R+   D        +LY+IDL G NE ++
Sbjct: 369 RTDGSGERLLAEGFLVEGPTWAPNGRVLSFFRESPSDERGRGQVVRLYTIDLTGVNERVL 428

Query: 432 NTPAYASDPQW 442
            TP   SDP W
Sbjct: 429 LTPIDGSDPAW 439


>gi|296447816|ref|ZP_06889729.1| Tol-Pal system beta propeller repeat protein TolB [Methylosinus
           trichosporium OB3b]
 gi|296254675|gb|EFH01789.1| Tol-Pal system beta propeller repeat protein TolB [Methylosinus
           trichosporium OB3b]
          Length = 438

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 165/406 (40%), Positives = 247/406 (60%), Gaps = 5/406 (1%)

Query: 42  SANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ 101
           S  + PV++A   F   DE    ++ V+  +  RS     I      ++    D  P   
Sbjct: 38  SGGFQPVAVAVAPFAG-DEAARTLTSVIVNNFNRSVFLRPIEPGGRPEQAAASDGAPELD 96

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
            + SLGAQ +VTGR  +    RL+ EFRL+DV   +Q  G+++ +  A  R++AH +SD 
Sbjct: 97  LYRSLGAQYVVTGRAQRGPDGRLKTEFRLFDVATGEQAAGQQYVTEAAFARRVAHLVSDA 156

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           ++  ITGEKG F++R++FV ES      +  L +MD+DGAN+RYL+   D ++  PRFSP
Sbjct: 157 VFTRITGEKGFFDTRVVFVDESGPKERRRKRLAIMDQDGANVRYLS-RGDDLVVTPRFSP 215

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + Q V Y ++   D  +V L+     +  + +GNF  M  APRFS +G++ ++S+ +  +
Sbjct: 216 SSQDVTYMSFGAGDP-KVLLLSIESGQR-EVVGNFPGMTFAPRFSPDGQKIVMSLSQGAS 273

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++Y++DL+S  T RLT+T  I+ S SYSP  ++IVFESDR G +Q+YVM +NG   +RI
Sbjct: 274 TNLYAMDLRSRTTTRLTDTNAIDTSPSYSPSGAEIVFESDRGGSQQIYVMSANGGGARRI 333

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           S      Y  PVWSP+GD IAFT+ S   F IGVMK DGS ER+L E  + + PTW+P+G
Sbjct: 334 SFGP-GHYSTPVWSPKGDYIAFTRQSSGAFGIGVMKPDGSGERILTEGFHNEGPTWAPNG 392

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
             L+F R+  G +G+K++ +D+ GR+E  + TP+YASDP W    D
Sbjct: 393 LFLMFFREPGGQSGAKIHMVDVFGRSEFPVPTPSYASDPSWGPLQD 438


>gi|209965095|ref|YP_002298010.1| translocation protein TolB [Rhodospirillum centenum SW]
 gi|209958561|gb|ACI99197.1| protein TolB precursor [Rhodospirillum centenum SW]
          Length = 451

 Score =  317 bits (811), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 173/414 (41%), Positives = 255/414 (61%), Gaps = 30/414 (7%)

Query: 47  PVSIAFTKFVSIDELGG---------KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI 97
           P+ IA T F     LGG         ++S V++ +L+RS +F  +    F   I  P+ +
Sbjct: 45  PMPIAITTF-----LGGTPQEQTVARQISSVITANLERSGLFQPLDPARF---IQTPEQL 96

Query: 98  ----PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
               PRF DW  +GAQ LV G V  +   RLRV+FRL+DV   KQ+ G  +F+    WR+
Sbjct: 97  ASAPPRFADWRLIGAQALVAGGVQAQPDGRLRVQFRLFDVVYGKQLTGLAYFTQAEGWRR 156

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           +AH ISD IY+ +TGE+G F++R+++++ES  +      L +MD+DG N R+LT  R  +
Sbjct: 157 VAHIISDAIYKRLTGEEGYFDTRVVYIAESGPANQRVKRLAIMDQDGENNRFLTDGRVLV 216

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           L  PRFSP  Q++ Y +Y +    RVYL +    R  + +G+F  M  APRFS +G + +
Sbjct: 217 L-TPRFSPTAQEITYLSYFNNKP-RVYLFNIDTGRQ-ELLGDFPGMTFAPRFSPDGNQVI 273

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +S+ +    DIY++DL++    RLT+   I+ + SYSPD  QIVFESDR G +QLY M +
Sbjct: 274 MSLAQSGNTDIYTLDLRTRRQTRLTDHPGIDTAPSYSPDGKQIVFESDRGGTQQLYTMNA 333

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +GS+ KRI+   +  Y  PVWSP+GDLIAFT+ +G +F IGV++ DG+ ERLL E  +++
Sbjct: 334 DGSNVKRITFG-QGRYATPVWSPRGDLIAFTRLNGGRFYIGVIRPDGTGERLLTEAFHVE 392

Query: 394 APTWSPSGRSLIFSRKKDGDTG-----SKLYSIDLNGRNETLINTPAYASDPQW 442
            PTW+P+GR L++ ++K    G     S+L++IDL G NE  + T   ASDP W
Sbjct: 393 GPTWAPNGRVLMYFKEKPVGAGARQRQSRLFTIDLTGVNERQMVTATDASDPAW 446


>gi|83312310|ref|YP_422574.1| translocation protein TolB [Magnetospirillum magneticum AMB-1]
 gi|118574583|sp|Q2W2B0|TOLB_MAGMM RecName: Full=Protein tolB; Flags: Precursor
 gi|82947151|dbj|BAE52015.1| Periplasmic component of the Tol biopolymer transport system
           [Magnetospirillum magneticum AMB-1]
          Length = 447

 Score =  316 bits (810), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 169/432 (39%), Positives = 256/432 (59%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI----DELGGKVSEVVSKDLQR 75
           + V++G        A V++        P+ IA   F       + +G  ++ VVS DL+R
Sbjct: 15  VFVILGVAAVLPAQAEVRIDITRGQMKPLPIAIPDFAGASAQDNRMGADIARVVSADLER 74

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F  I   +F Q   +  + PRF DW ++ A+ LV+G++      R+RVEFRLWDV +
Sbjct: 75  SGLFKPIDPKAFIQNAASLQAGPRFPDWKAINAEALVSGKIESGADGRVRVEFRLWDVFN 134

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              + G    +SP  WR+++H ++D IY+ +TGE G F+++I++++ES      K  L +
Sbjct: 135 EAYMTGWTLSASPQDWRRLSHKVADAIYKRVTGEDGYFDTQIVYIAESGPKNDRKKRLSI 194

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD+DG N R+LT   + +L  PRFSP+ +++ Y +Y  + + RVY+ +    R  + +GN
Sbjct: 195 MDQDGENHRFLTDGSELVL-TPRFSPSAREITYLSY-FKGVPRVYIFNLDTGRR-ESLGN 251

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F  M  APRFS +G + + S+ ++   +IY ++L +    +LT    I+ + SYSPD  Q
Sbjct: 252 FPGMTFAPRFSPDGNKVVFSMAENGNTEIYEMNLLTRQKRQLTMNPAIDTAPSYSPDGQQ 311

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           IVFESDR G +Q+Y M ++GS+ +RIS   +  Y  PVWSP+GDLIAFTK  G +F IGV
Sbjct: 312 IVFESDRGGGQQIYTMSADGSNPQRISF-GDGRYGTPVWSPRGDLIAFTKQKGGQFFIGV 370

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-----KLYSIDLNGRNETL 430
           M+ DGS ERLL E   ++ PTW+P+GR L F R+   D        +LY+IDL G NE +
Sbjct: 371 MRTDGSGERLLAEGFLVEGPTWAPNGRVLSFFRESPSDERGRGQVVRLYTIDLTGVNERV 430

Query: 431 INTPAYASDPQW 442
           + TP   SDP W
Sbjct: 431 LLTPVDGSDPAW 442


>gi|221236273|ref|YP_002518710.1| translocation protein TolB [Caulobacter crescentus NA1000]
 gi|220965446|gb|ACL96802.1| TolB protein [Caulobacter crescentus NA1000]
          Length = 443

 Score =  316 bits (810), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 174/427 (40%), Positives = 259/427 (60%), Gaps = 14/427 (3%)

Query: 25  GGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ 84
           G  F T   A ++V  N+    P+ IA   F S    G ++++V++ +L+RS +F  ++ 
Sbjct: 27  GAAFVTPAAAQIEVDINAGAVKPLPIAIPVF-SGSTRGAEIAQVITGNLERSGLFQPLNV 85

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
                K+ + +  PRF DW S GAQ L+ G+V       LRV+FRLWDV  ++Q++G +F
Sbjct: 86  AGVPDKLADVNVQPRFPDWQSTGAQALINGQVTVGADGGLRVDFRLWDVFSQQQLLGLQF 145

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            S+P +WR++AH ISD +Y+ +TGEKG F++R+ FV+ES         L +MD+DGAN +
Sbjct: 146 SSTPDNWRRVAHKISDAVYERLTGEKGYFDTRVAFVAESGPKLNRIKRLAIMDQDGANPQ 205

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           YLT     I+  PRFS   Q++ Y          +YL++    R  + +G F  M+ APR
Sbjct: 206 YLT-DGSYIVMTPRFSSTSQELTYMALRPTGS-SIYLLNLETSRQ-ETVGKFPGMVFAPR 262

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G +   SV+++   DIY +DL+S AT R+T    I+ S S+SPD ++IVF SDR G
Sbjct: 263 FSPDGSKVAFSVERNGNSDIYVMDLRSRATTRITTDPAIDTSPSFSPDGTKIVFNSDRGG 322

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + Q+YVM ++GS  +RIS      Y  PVWSP+GD IAFTK +G +F IGVM+ DG  ER
Sbjct: 323 QAQIYVMNTDGSGVRRISYGG-GRYTTPVWSPRGDFIAFTKQTGGEFHIGVMRADGGDER 381

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTPAY---ASDP 440
           LL      + PTW+P+GR L+F R  +G +G+ +L+++D+ GR   ++   AY   ASDP
Sbjct: 382 LLTTSYLDEGPTWAPNGRVLMFFR--EGPSGNPRLWTVDITGR---ILRPAAYSGSASDP 436

Query: 441 QWVGFMD 447
            W   +D
Sbjct: 437 AWSPLLD 443


>gi|294085866|ref|YP_003552626.1| TolB protein [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292665441|gb|ADE40542.1| TolB protein [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 431

 Score =  316 bits (810), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 174/434 (40%), Positives = 254/434 (58%), Gaps = 17/434 (3%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSEVVSKDL 73
            ++ V++ G      HA ++V       +P  IA   F   D    E+G ++S ++S DL
Sbjct: 1   MIMTVMVAGV----AHAQLRVVITEGQVAPTPIAIADFTGPDGEVTEIGRQMSAIISNDL 56

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
           + S +F  I   +F      P   P F DW  +GA+ L+ G    +    L+VEF LWDV
Sbjct: 57  ESSGLFQPIDSAAFISPPKAPSIRPNFSDWTPVGAKGLLVGSAYTDENGMLQVEFVLWDV 116

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
             +K I      S PA  R+++H I+D +Y+  TG+ G F+++I++V+ES         L
Sbjct: 117 VTQKDITQGSGNSDPAGLRQLSHKIADYVYEEFTGDTGYFDTQIVYVAESGSQSQRVKRL 176

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD+DG N RYLT   D +L  PRFSP   +VAY  Y +E+   VYL+D    R  +R+
Sbjct: 177 AIMDQDGHNHRYLTNGLDLVL-TPRFSPTANEVAYLNYFNEE-PNVYLLDVFTART-ERL 233

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           G+F  M  APRF  +G + ++S+ KD   DIY +D+++ +  +LT +  I+ S SYSPD 
Sbjct: 234 GSFPGMTFAPRFGPDGDKLIMSLAKDGLTDIYEMDMRTQSITQLTKSASIDTSPSYSPDG 293

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +IVF SDR G +QLYVM ++GS+ KRIS   +  Y  PVWSP+GD++AFTK +G  F I
Sbjct: 294 KRIVFNSDRGGSQQLYVMNADGSNVKRISY-GDGRYATPVWSPRGDIVAFTKMTGGTFYI 352

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTG-SKLYSIDLNGRNE 428
           GVM  DG+ ERLL +   ++ PTW+P+GR L++ +    K DG  G + LY +D+ G NE
Sbjct: 353 GVMNIDGTGERLLAQGFLVEGPTWAPNGRVLMYFKQQPFKDDGSGGKTALYRVDITGFNE 412

Query: 429 TLINTPAYASDPQW 442
             I TP+ ASDP W
Sbjct: 413 RRIITPSDASDPAW 426


>gi|16127460|ref|NP_422024.1| translocation protein TolB [Caulobacter crescentus CB15]
 gi|32699717|sp|Q9A3H4|TOLB_CAUCR RecName: Full=Protein tolB; Flags: Precursor
 gi|13424914|gb|AAK25192.1| tolB protein [Caulobacter crescentus CB15]
          Length = 432

 Score =  315 bits (808), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 174/427 (40%), Positives = 259/427 (60%), Gaps = 14/427 (3%)

Query: 25  GGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ 84
           G  F T   A ++V  N+    P+ IA   F S    G ++++V++ +L+RS +F  ++ 
Sbjct: 16  GAAFVTPAAAQIEVDINAGAVKPLPIAIPVF-SGSTRGAEIAQVITGNLERSGLFQPLNV 74

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
                K+ + +  PRF DW S GAQ L+ G+V       LRV+FRLWDV  ++Q++G +F
Sbjct: 75  AGVPDKLADVNVQPRFPDWQSTGAQALINGQVTVGADGGLRVDFRLWDVFSQQQLLGLQF 134

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            S+P +WR++AH ISD +Y+ +TGEKG F++R+ FV+ES         L +MD+DGAN +
Sbjct: 135 SSTPDNWRRVAHKISDAVYERLTGEKGYFDTRVAFVAESGPKLNRIKRLAIMDQDGANPQ 194

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           YLT     I+  PRFS   Q++ Y          +YL++    R  + +G F  M+ APR
Sbjct: 195 YLT-DGSYIVMTPRFSSTSQELTYMALRPTGS-SIYLLNLETSRQ-ETVGKFPGMVFAPR 251

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G +   SV+++   DIY +DL+S AT R+T    I+ S S+SPD ++IVF SDR G
Sbjct: 252 FSPDGSKVAFSVERNGNSDIYVMDLRSRATTRITTDPAIDTSPSFSPDGTKIVFNSDRGG 311

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + Q+YVM ++GS  +RIS      Y  PVWSP+GD IAFTK +G +F IGVM+ DG  ER
Sbjct: 312 QAQIYVMNTDGSGVRRISYGG-GRYTTPVWSPRGDFIAFTKQTGGEFHIGVMRADGGDER 370

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTPAY---ASDP 440
           LL      + PTW+P+GR L+F R  +G +G+ +L+++D+ GR   ++   AY   ASDP
Sbjct: 371 LLTTSYLDEGPTWAPNGRVLMFFR--EGPSGNPRLWTVDITGR---ILRPAAYSGSASDP 425

Query: 441 QWVGFMD 447
            W   +D
Sbjct: 426 AWSPLLD 432


>gi|170741556|ref|YP_001770211.1| beta-propeller repeat-containing to-pal system protein TolB
           [Methylobacterium sp. 4-46]
 gi|168195830|gb|ACA17777.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           sp. 4-46]
          Length = 442

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 176/432 (40%), Positives = 251/432 (58%), Gaps = 10/432 (2%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L LVL G   P +    ++V +  A + P+ IA   F     L   VS +V+ +L+RS
Sbjct: 17  LWLFLVLTG---PAAAQLNLRVGSGGA-FQPMPIAVADFAGDPSLAPLVSGIVANNLKRS 72

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F  I +  F +   N D+ P F  W   GAQ LVTGRV ++    ++ EFRLWDV   
Sbjct: 73  GYFVPIDRARFPE-TPNFDAAPNFAAWKEAGAQGLVTGRVTRDASGGVKAEFRLWDVLSG 131

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q+IG+++     + R++ H ISD +Y  ITG  G F++R+ FV ES      +  L +M
Sbjct: 132 QQMIGQQYAGGSGNSRRMGHLISDAVYTKITGIGGFFDTRVAFVDESGSKERRRKRLAIM 191

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DGAN+RYLT S +  +  PR+SP  Q + Y +       RV +++     A + I   
Sbjct: 192 DQDGANVRYLT-SGEAAVVAPRYSPATQDITYMSQTTGQQPRVQVINLETG-ARQVIPTH 249

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             M  +PRFS +G+R ++S Q      IY +DL S A  R+TN   I+ S S+SPD  +I
Sbjct: 250 AEMSTSPRFSPDGRRIVMSDQDGGNASIYVMDLASKAQTRITNANAIDTSPSFSPDGREI 309

Query: 317 VFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           VFESDR G++Q+YVM ++GS+ +RIS  D  AS   P WSP+GD IAFT+     FAI +
Sbjct: 310 VFESDRGGQQQIYVMGADGSNPRRISFGDGSAS--QPAWSPRGDYIAFTRQRRGSFAICI 367

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           MK DGS ER+L E  + + PTW+P+G+ ++F R   G  G KLY +D+ GR E  + TP+
Sbjct: 368 MKPDGSGERVLTEGFHNEGPTWAPNGQYVMFFRDPGGQAGGKLYMVDVTGRVEQPVPTPS 427

Query: 436 YASDPQWVGFMD 447
           YASDP W   +D
Sbjct: 428 YASDPTWSPLLD 439


>gi|260428940|ref|ZP_05782917.1| Tol-Pal system beta propeller repeat protein TolB [Citreicella sp.
           SE45]
 gi|260419563|gb|EEX12816.1| Tol-Pal system beta propeller repeat protein TolB [Citreicella sp.
           SE45]
          Length = 440

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 173/417 (41%), Positives = 254/417 (60%), Gaps = 18/417 (4%)

Query: 36  VKVATNSANYSPVSIAFTKFVS----IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
           +++        P++ A   FV+      +   +++ VV+ DL  + +F  I +D+   +I
Sbjct: 28  LRIEITEGTIEPMAYAVPDFVAETPGAQQYAQQIARVVADDLTGTGLFREIPRDAHISRI 87

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII-GKKFFSSPAS 150
           T+ +S  +F DW ++ A VL+TG V +EG  R+ V+FR+WDV    ++  G +F ++   
Sbjct: 88  TSFESPVQFADWKAINALVLLTGAVSEEGG-RISVKFRVWDVFAGTELGDGMQFAATADG 146

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           WR++AH ++D +Y  +TGE G F+SR++FVSES         L +MD DGAN++YLT SR
Sbjct: 147 WRRLAHKVADQVYSRLTGETGYFDSRVVFVSESGPKEQRAKRLAIMDYDGANVQYLTDSR 206

Query: 211 DQILFEPRFSPNQQKVAYATYDDED----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             I+  PRFSPN  +V Y +Y+  +    +L V  + +RI R+   +     M  APRFS
Sbjct: 207 S-IVLAPRFSPNGDRVLYTSYETGEPQIHVLNVGAVQSRILRSAAGV-----MSFAPRFS 260

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G R + SV +    DIY +D+ S A+ +LT T  I  + S+SPD S+IVFESDR G +
Sbjct: 261 PDGSRVVYSVTQGSNTDIYMMDVASGASTQLTATPAIETAPSFSPDGSRIVFESDRSGTQ 320

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           QLYVM + G +  RIS   +  Y  PVWSP+GD+IAFTK    +F IGVM+ DGS+ERLL
Sbjct: 321 QLYVMPAGGGEATRISF-GQGRYGTPVWSPRGDMIAFTKQHQGRFHIGVMRTDGSEERLL 379

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
                 + PTW+P+GR L+FSR+  G  G S LY++D+ GR  T + TPA ASDP W
Sbjct: 380 TASPLDEGPTWAPNGRVLMFSRETLGAQGTSSLYTVDVAGRKLTRVRTPAGASDPSW 436


>gi|167648382|ref|YP_001686045.1| translocation protein TolB [Caulobacter sp. K31]
 gi|167350812|gb|ABZ73547.1| Tol-Pal system beta propeller repeat protein TolB [Caulobacter sp.
           K31]
          Length = 441

 Score =  313 bits (801), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 173/423 (40%), Positives = 254/423 (60%), Gaps = 14/423 (3%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
           PT   A ++V  +     P+ +A   F S    G  +++V+S +L+RS +F  ++  +  
Sbjct: 29  PTVARAQIEVDIDKGAVKPLPVAIPAF-SGGGRGADIAQVISGNLERSGLFQPLNVANVA 87

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
            K+ + +  PRF DW + GAQ L+ G+V       LRV+FRLWD   ++Q++G +F S+ 
Sbjct: 88  DKLADVNVQPRFPDWQATGAQALINGQVTVGADGVLRVDFRLWDTFSQQQLLGLQFTSTA 147

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
            +WR++AH ISD +Y+ +TGEKG F++R++FV+ES         L +MD+DGAN +YLT 
Sbjct: 148 ENWRRVAHKISDAVYERLTGEKGYFDTRVVFVAESGGKLTRVKRLAIMDQDGANPQYLTD 207

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
               I+  PRFS   Q++ Y          +YL +    R  + IG F  M+ APRFS +
Sbjct: 208 G-SYIVMTPRFSSTSQEITYMALRPTGS-SIYLTNLETART-ETIGKFPGMVFAPRFSPD 264

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G +   SV+K    DIY +DL+S  + R+T    I+ S S+SPD S+IVF SDR G+ QL
Sbjct: 265 GGKVAFSVEKGGNSDIYVMDLRSRQSTRITTDPAIDTSPSFSPDGSKIVFNSDRGGQAQL 324

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y+M ++GS  +RIS      Y  PVWSP+GD IAFTK +G +F IGVMK DG  ERLL  
Sbjct: 325 YIMNADGSGVRRISYGG-GRYTTPVWSPRGDFIAFTKQTGGEFHIGVMKVDGGDERLLTT 383

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAY---ASDPQWVG 444
               + PTW+P+GR L+FSR  +G +G S+L+++D+ GR   ++   AY   ASDP W  
Sbjct: 384 SYLDEGPTWAPNGRVLMFSR--EGSSGNSRLWTVDITGR---ILRPAAYTGAASDPAWSP 438

Query: 445 FMD 447
            +D
Sbjct: 439 LLD 441


>gi|83950088|ref|ZP_00958821.1| translocation protein TolB precursor [Roseovarius nubinhibens ISM]
 gi|83837987|gb|EAP77283.1| translocation protein TolB precursor [Roseovarius nubinhibens ISM]
          Length = 440

 Score =  312 bits (800), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 169/404 (41%), Positives = 248/404 (61%), Gaps = 13/404 (3%)

Query: 47  PVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P+  A   FV    + +EL   ++ VV+ DL  + +F  ISQD+F  ++T+  S  +F D
Sbjct: 38  PMPFAVPDFVPESGAAEELSRNIARVVAADLSGTGLFREISQDAFISRVTSFSSPVQFAD 97

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDD 161
           W ++ AQ LVTG V  +G  R+  +FR+WDV   +++  G +F  +   WR+IAH ++D 
Sbjct: 98  WKAINAQALVTGAVAVDGTGRVTAKFRVWDVFAGQELGSGLQFVGTVDGWRRIAHKVADQ 157

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +Y  ITGE G F+SR++FVSE+         L +MD DGAN++YLT S   I+  PRFSP
Sbjct: 158 VYSRITGEGGYFDSRVVFVSETGPKDNRAKRLSIMDYDGANLKYLTDS-SSIVLAPRFSP 216

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--SMILAPRFSSNGKRALISVQKD 279
              +V Y +Y+     RVY++D  +    +R+   +  +M  APRFS +G+  + S+ + 
Sbjct: 217 TGDRVLYTSYE-SGFPRVYVLD--VASVSRRLLESQDGTMSFAPRFSPDGRTVVYSLIQG 273

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              DIY++D+ + A++RLTN   I  + S+SPD  QIVFESDR G  Q+YVM + G + +
Sbjct: 274 GNTDIYTMDIATGASQRLTNAPSIETAPSFSPDGRQIVFESDRSGTNQIYVMNAQGGEAR 333

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           RIS      Y  PVWSP+GD IAFTK S  +F IGVM+ +G +ERLL      + PTWSP
Sbjct: 334 RIS-GGTGQYGTPVWSPRGDYIAFTKQSKGRFHIGVMRVNGEEERLLTASFLDEGPTWSP 392

Query: 400 SGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
           +GR ++F+R+  G  G S+L+S+D+ GRN   + TP  ASDP W
Sbjct: 393 NGRVIMFTRETQGAQGQSRLWSVDITGRNLRQVQTPGGASDPSW 436


>gi|126728386|ref|ZP_01744202.1| translocation protein TolB precursor [Sagittula stellata E-37]
 gi|126711351|gb|EBA10401.1| translocation protein TolB precursor [Sagittula stellata E-37]
          Length = 432

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 172/431 (39%), Positives = 255/431 (59%), Gaps = 9/431 (2%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----IDELGGKVSEVVSKDL 73
            +   +  G  P      +++  +     P+ IA   FV+      E   ++S VV++DL
Sbjct: 1   MMAFAVFQGVLPAVAQEPLRLEIDRGIVEPMPIAIPSFVAETPAAQEYADQLSRVVAEDL 60

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
             + +F  I +D+   +++   +  +F DW ++ AQ LVTG V  +G  R+ V+FR WDV
Sbjct: 61  VGTGLFREIPRDAHISRVSTFAAPVQFADWKAINAQALVTGAVSADGSGRVVVKFRAWDV 120

Query: 134 -KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
             +R+   G +F SS   WR++AH ++D +Y  +TGE   F+SR++FVSE+      +  
Sbjct: 121 FAERELGEGMQFASSADGWRRLAHKVADQVYSRLTGESPYFDSRVVFVSETGPKDQRQKR 180

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L +MD DGAN++YLT S   I+  PRFSP   +V Y +Y      R++++D    ++   
Sbjct: 181 LAIMDYDGANVQYLTDS-SSIVLAPRFSPTGGQVLYTSYA-TGFPRIHILDVGAVQSRIL 238

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
             N   M  APRFS +G+  + S+ +    DI+++D+ S AT RLT+T  I  + S+SPD
Sbjct: 239 QANEGVMSFAPRFSPDGRMVVYSMTQGSNTDIWAMDVASGATRRLTSTPAIETAPSFSPD 298

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            S+IVFESDR G +QLYVM ++G +  RIS   E  Y  PVWSP+GD IAFTK +  +F 
Sbjct: 299 GSRIVFESDRSGTQQLYVMPASGGEGTRISFG-EGRYGTPVWSPRGDRIAFTKQNKGRFH 357

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLI 431
           IGVM  DGS+ERLL      + PTW+P+GR ++FSR+  G  G S LYS+D++GRN   +
Sbjct: 358 IGVMNTDGSEERLLTASFLDEGPTWAPNGRVIMFSRETQGAQGASALYSVDISGRNLRRV 417

Query: 432 NTPAYASDPQW 442
            TPA ASDP W
Sbjct: 418 RTPAGASDPSW 428


>gi|170747178|ref|YP_001753438.1| beta-propeller repeat-containing to-pal system protein TolB
           [Methylobacterium radiotolerans JCM 2831]
 gi|170653700|gb|ACB22755.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           radiotolerans JCM 2831]
          Length = 445

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 169/426 (39%), Positives = 250/426 (58%), Gaps = 5/426 (1%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L  +  L+         A +++     N+ P+ IA   F     L G VS VV+ DL+RS
Sbjct: 18  LIAVFTLLTAVLAGPAQAQLQLRIGGGNFQPMPIAIADFGGDPSLAGLVSGVVTNDLRRS 77

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F  +    F ++  N D+ P F+ W + G Q LVTGRV++EG  R++VEFRLWDV + 
Sbjct: 78  GYFTPLDHARFPEQ-PNFDAAPNFEKWRATGVQGLVTGRVVREG-GRVKVEFRLWDVTNG 135

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q+ G+++ +  A+ R+  H ISD +Y  ITG    F+SRI FV E+      +  L VM
Sbjct: 136 QQMTGQQYGTDAANVRRTGHLISDGVYTKITGLGPWFDSRIAFVDETGPKENRRKRLMVM 195

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DGAN+R +T     I+  PR+SP  Q +A+         RV +++       + +GN 
Sbjct: 196 DQDGANVRAITTGEMSIV-APRYSPATQDIAFMAQATGHQPRVQMINLETGSR-QALGNV 253

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            SM  +PRFS +G++ ++SVQ+    DI ++DL S A   +TN + I+ S +YSPD SQI
Sbjct: 254 DSMSASPRFSPDGRKIVMSVQQGGNADIVTMDLASKAQRSITNGMAIDTSPTYSPDGSQI 313

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            FESDR G +Q+YVM ++GS+  RI+     S   P +SP+GDLIA+T+     FAI V 
Sbjct: 314 AFESDRGGSQQVYVMGADGSNPHRITFGP-GSASQPAFSPRGDLIAYTRQRNGGFAICVS 372

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ER+L E  + + PT++P+G+ ++F R   G  G KL+ +D+ G+ E  + TPAY
Sbjct: 373 KPDGSGERVLTEGFHNEGPTFAPNGQYVLFFRDPGGQGGGKLFMVDITGKVEQPVPTPAY 432

Query: 437 ASDPQW 442
           ASDP W
Sbjct: 433 ASDPTW 438


>gi|220924307|ref|YP_002499609.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Methylobacterium nodulans ORS 2060]
 gi|219948914|gb|ACL59306.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           nodulans ORS 2060]
          Length = 442

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 169/406 (41%), Positives = 241/406 (59%), Gaps = 4/406 (0%)

Query: 42  SANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ 101
             ++ P+ IA   F     L   V+ +V+ +L+RS  F  I +  F +   N D+ PRF 
Sbjct: 38  GGSFQPMPIAVADFSGDPSLAPLVAGIVTSNLKRSGYFVPIEKARFPE-TPNFDAAPRFA 96

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
            W   GAQ LVTGRV ++    ++ EFRLWDV   +Q+IG+++  S A+ R++ H ISD 
Sbjct: 97  AWKEAGAQGLVTGRVSRDASGGIKAEFRLWDVLAGQQMIGQQYAGSAANARRMGHLISDA 156

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +Y  ITG  G F++RI FV ES      +  L +MD+DGAN+RYLT S +  +  PR+SP
Sbjct: 157 VYTKITGIGGFFDTRIAFVDESGSKERRRKRLAIMDQDGANVRYLT-SGEAAVVAPRYSP 215

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
             Q + Y +       RV +++     A + I     M  +PRFS +G+R ++S Q    
Sbjct: 216 ATQDITYMSQITGQQPRVQVINLETG-ARQVIPTKAEMSTSPRFSPDGRRLVMSDQDGGN 274

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             IY +DL S A  R+TN   I+ S S+SPD  +IVFESDR G++Q+YVM ++GS+ +RI
Sbjct: 275 ASIYVMDLASKAQTRVTNANAIDTSPSFSPDGREIVFESDRGGQQQIYVMGADGSNPRRI 334

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           S   E S   P WSP+GD IAFT+     FAI +MK DGS ER+L E  + + PTW+P+G
Sbjct: 335 SFG-EGSASQPAWSPRGDYIAFTRQRKGSFAICIMKPDGSGERVLTEGFHNEGPTWAPNG 393

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           + ++F R   G  G KLY +D+ GR E  + TP+YASDP W   +D
Sbjct: 394 QYVLFFRDPGGQAGGKLYMVDITGRVEQPVPTPSYASDPSWSPLID 439


>gi|114765731|ref|ZP_01444829.1| translocation protein TolB precursor [Pelagibaca bermudensis
           HTCC2601]
 gi|114541948|gb|EAU44983.1| translocation protein TolB precursor [Roseovarius sp. HTCC2601]
          Length = 446

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 168/413 (40%), Positives = 252/413 (61%), Gaps = 10/413 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVS----IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
           +++        P++ A   FV+      +   ++++V++ DL  + +F  I +D+   +I
Sbjct: 34  LRIEITEGTIEPMAYAVPSFVAETPGAQQYAEQITQVIADDLTGTGLFREIPRDAHISRI 93

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII-GKKFFSSPAS 150
           T+ +S  +F DW ++ A VL+TG  + E   R+ V+FR+WDV    ++  G +F ++   
Sbjct: 94  TSFESPVQFADWKAINALVLLTG-AVSEQNGRVTVKFRIWDVFAGTELGDGMQFAATSDG 152

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           WR++AH ++D +Y  +TGE G F+SR++FVSES         L +MD DGAN++YLT SR
Sbjct: 153 WRRLAHKVADQVYSRLTGESGYFDSRVVFVSESGPKDQRAKRLAIMDYDGANVQYLTDSR 212

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             I+  PRFSPN ++V Y +Y+  +  RV++++    ++         M  APRFS +G 
Sbjct: 213 S-IVLAPRFSPNGERVLYTSYESGEP-RVHVLNVGAVQSQIMSAGGGVMSFAPRFSPDGS 270

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           + + SV      DIY  DL S +T +LT T  I  + S+SPD S+IVFESDR G +QLYV
Sbjct: 271 KVVYSVTSGSNTDIYMRDLASGSTTQLTFTPAIETAPSFSPDGSRIVFESDRSGSQQLYV 330

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M ++G +  RIS   +  Y  PVWSP+GDLIAFTK +  +F IGVM+ DGS+ERLL    
Sbjct: 331 MPASGGEPTRISFG-QGRYGTPVWSPRGDLIAFTKQNQGRFHIGVMRTDGSEERLLTASH 389

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
             + PTW+P+GR L+FSR+  G +G S LYS+D+ GR  T + TP  ASDP W
Sbjct: 390 LDEGPTWAPNGRVLMFSRETQGASGTSSLYSVDVAGRKLTRVRTPDGASDPSW 442


>gi|149202852|ref|ZP_01879823.1| translocation protein TolB precursor [Roseovarius sp. TM1035]
 gi|149143398|gb|EDM31434.1| translocation protein TolB precursor [Roseovarius sp. TM1035]
          Length = 441

 Score =  306 bits (784), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 171/446 (38%), Positives = 257/446 (57%), Gaps = 17/446 (3%)

Query: 3   LRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----I 58
           +RF +   L   + L  + VL  G  P      +++        P+  A   FVS     
Sbjct: 2   MRFMMT--LLAALTLWAMPVLAQGNGP------LRIEITEGVIEPLPFAVPDFVSDSAAG 53

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
            ELG  ++ V++ DL  + +F  I   +   +IT+ +S  ++ DW ++ AQ L+TG V  
Sbjct: 54  QELGRNIASVIAADLNGTGLFRQIPSSAHISRITSFESPVQYADWRAINAQALITGAVST 113

Query: 119 EGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
           +G  R+  +FR++DV   +++  G++   +   WR+IAH ++D +Y  ITGE G F+SR+
Sbjct: 114 DGAGRIIAKFRIYDVFSGQELGAGQQLVGTQDGWRRIAHKVADQVYSRITGEGGYFDSRV 173

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +FV+ES         L +MD DGAN++YLT S   I+  PRFSP   +V Y +Y+     
Sbjct: 174 VFVAESGPKDQRAKRLGIMDYDGANVQYLTDS-TSIVLAPRFSPTGDRVLYTSYE-TGFP 231

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+Y++D       +      +M  APRF+ NG+  + S+ +    D+Y++D+ S A+ RL
Sbjct: 232 RIYVLDVANVGRRELPTQDATMSFAPRFAPNGRTVVYSLTQGGNTDLYTMDIGSGASTRL 291

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T    I  + SYSPD SQIVFESDR G  QLY+M + G + +RIS   E  Y  PVWSP+
Sbjct: 292 TTAPSIETAPSYSPDGSQIVFESDRSGTPQLYIMSAGGGEARRISFG-EGRYGTPVWSPR 350

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-S 416
           GDL+AFTK S  +F IGVM+ DGS+ERLL      + PTW+P+GR ++F+R+  G+ G +
Sbjct: 351 GDLVAFTKQSKGRFHIGVMRTDGSEERLLTASFLDEGPTWAPNGRVIMFTRETQGEQGQA 410

Query: 417 KLYSIDLNGRNETLINTPAYASDPQW 442
            LYS+D+ GRN   + T   ASDP W
Sbjct: 411 SLYSVDITGRNLKQVPTNTGASDPSW 436


>gi|159043660|ref|YP_001532454.1| translocation protein TolB [Dinoroseobacter shibae DFL 12]
 gi|189035981|sp|A8LHQ6|TOLB_DINSH RecName: Full=Protein tolB; Flags: Precursor
 gi|157911420|gb|ABV92853.1| Tol-Pal system beta propeller repeat TolB [Dinoroseobacter shibae
           DFL 12]
          Length = 446

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 171/404 (42%), Positives = 246/404 (60%), Gaps = 12/404 (2%)

Query: 47  PVSIAFTKFVS----IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P+ IA   F++      +    +++VV+ DL+ S +F  I +++F   IT+ DS  ++ D
Sbjct: 42  PLPIAVPPFLAETPAASQFARDIAQVVADDLEGSGLFRAIPENAFISPITSFDSPVQYAD 101

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV-KDRKQIIGKKFFSSPASWRKIAHTISDD 161
           W ++ AQ LVTG V      RL V+FRL+DV  D     G +F +S +SWR++ H ++D 
Sbjct: 102 WKAINAQALVTGSVSVASDGRLVVKFRLFDVFSDAPLGKGLQFVASQSSWRRMGHKVADA 161

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +Y  ITGE G F+SR++FVSE+      +  L +MD DGAN+++LT S   I+  PRFSP
Sbjct: 162 VYSRITGEGGYFDSRVVFVSETGPKNARQKRLAIMDYDGANVQFLTDS-SAIVLAPRFSP 220

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQKD 279
              +V Y +Y      ++ L+D    R+ + +G+ +   M  APRFS +G+  + S+   
Sbjct: 221 TGDRVLYTSYATGRP-QITLLDVNSVRS-QGLGSAQGGEMSFAPRFSPDGRSVVFSLTNG 278

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              DIY  DL S A  RLT T  I  + S+SPD  QIVFESDR G +QLYVM + G + +
Sbjct: 279 GNSDIYRRDLSSGAQTRLTATPAIETAPSFSPDGRQIVFESDRSGSQQLYVMSATGGEAR 338

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           RIS      Y  PVWSP+GDLIAFTK +  +F IGVM+ DGS+ERLL      ++PTWSP
Sbjct: 339 RISFGP-GRYGTPVWSPRGDLIAFTKQNQGRFHIGVMRTDGSEERLLTSSFLDESPTWSP 397

Query: 400 SGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTPAYASDPQW 442
           +GR ++F+R+  G  G+  LYS+D++GRN   + TP  ASDP W
Sbjct: 398 NGRVIMFTRETSGAGGAPSLYSVDISGRNLRRVPTPGAASDPAW 441


>gi|89053466|ref|YP_508917.1| translocation protein TolB [Jannaschia sp. CCS1]
 gi|119371046|sp|Q28TS0|TOLB_JANSC RecName: Full=Protein tolB; Flags: Precursor
 gi|88863015|gb|ABD53892.1| Twin-arginine translocation pathway signal [Jannaschia sp. CCS1]
          Length = 445

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 159/402 (39%), Positives = 240/402 (59%), Gaps = 9/402 (2%)

Query: 47  PVSIAFTKFVSI---DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW 103
           P+  A   F+++   ++    VS V++ DL+ + +F  I  D++  +ITN  +   + DW
Sbjct: 42  PLPFALPTFLAVGGAEDAAADVSRVIAADLRGTGLFRQIPPDAYISQITNFGAPVAYPDW 101

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA-SWRKIAHTISDDI 162
            ++ AQ L+TG+V      +L V FRL+DV  +  +     F  PA SWR++AHT++D +
Sbjct: 102 QAINAQALITGQVEARADGQLVVRFRLFDVFSQAPLGEGLQFVGPADSWRRMAHTVADQV 161

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y  ITGE G F++R+ F++E          L +MD DGAN+++LT SR  I+  PRFSP 
Sbjct: 162 YSRITGEGGYFDTRVAFIAEEGPKNARLKRLAIMDYDGANVQFLTDSR-SIVLAPRFSPQ 220

Query: 223 QQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
             ++ Y +Y+     +VY+MD   + R P       +M  +PRFS +G+  + S+     
Sbjct: 221 GDRILYTSYE-SGFPQVYIMDVATVQRRPLEAIPAETMTFSPRFSPSGQSVVFSLVDGSN 279

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIYS+DL +    +LT    I  + S+SPD SQIVFESDR G +Q+Y+M ++G + +R+
Sbjct: 280 TDIYSLDLATGTRRQLTQAPSIETAPSFSPDGSQIVFESDRSGNQQIYIMPADGGEARRV 339

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           S      Y  PVWSP+GD IAFTK    +F IGVM+ DGS ERLL      + PTW+P+G
Sbjct: 340 SAGT-GRYGTPVWSPRGDYIAFTKQENGRFHIGVMRTDGSDERLLTSSFLDEGPTWAPNG 398

Query: 402 RSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTPAYASDPQW 442
           R ++F+R+  GD G+  +YS+D++GRN   + TP  ASDP W
Sbjct: 399 RVIMFTRETPGDDGAPAVYSVDISGRNLQRVATPGMASDPAW 440


>gi|85706711|ref|ZP_01037803.1| translocation protein TolB precursor [Roseovarius sp. 217]
 gi|85668769|gb|EAQ23638.1| translocation protein TolB precursor [Roseovarius sp. 217]
          Length = 440

 Score =  303 bits (775), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 166/405 (40%), Positives = 244/405 (60%), Gaps = 15/405 (3%)

Query: 47  PVSIAFTKFVS----IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P+  A   FVS      ELG  ++ V++ DL  + +F  I  ++   +IT+ +S  ++ D
Sbjct: 37  PMPFAAPDFVSDSAAGQELGRNIASVIAADLSGTGLFRQIPSEAHISRITSFESPVQYAD 96

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDD 161
           W ++ AQ L+TG V  +G  R+  +FR++DV   +++  G++   +   WR+IAH ++D 
Sbjct: 97  WRAVNAQALITGAVSTDGAGRIVAKFRIYDVFSGQELGSGQQLVGTQDGWRRIAHKVADQ 156

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +Y  ITGE G F+SR++FV+ES         L +MD DGAN +YLT S   I+  PRFSP
Sbjct: 157 VYSRITGEGGYFDSRVVFVAESGPKDQRAKRLAIMDYDGANTQYLTDSAS-IVLAPRFSP 215

Query: 222 NQQKVAYATYDDEDILRVYLMD-TRIDR--APKRIGNFRSMILAPRFSSNGKRALISVQK 278
              +V Y +Y+     R+Y++D   + R   P   G   +M  APRF+ NG+  + S+ +
Sbjct: 216 TGDRVLYTSYE-TGFPRIYVLDVANVGRRELPTLDG---TMSFAPRFAPNGRTVVYSLTQ 271

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
               D+Y++D+ S A+ RLT    I  + SY+PD SQIVFESDR G  QLYVM + G + 
Sbjct: 272 GGNTDLYTMDVGSGASTRLTTAPSIETAPSYNPDGSQIVFESDRSGTPQLYVMSAGGGEA 331

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           +RIS   E  Y  PVWSP+GDL+AFTK S  +F IGVM+ DGS+ERLL      + PTW+
Sbjct: 332 RRISF-GEGRYGTPVWSPRGDLVAFTKQSKGRFHIGVMRTDGSEERLLTASFLDEGPTWA 390

Query: 399 PSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
           P+GR ++F+R+  G  G + LYS+D+ GRN   + T   ASDP W
Sbjct: 391 PNGRVIMFTRETQGAQGQASLYSVDITGRNLKAVPTNTGASDPSW 435


>gi|114327770|ref|YP_744927.1| translocation protein TolB [Granulibacter bethesdensis CGDNIH1]
 gi|114315944|gb|ABI62004.1| tolB protein [Granulibacter bethesdensis CGDNIH1]
          Length = 452

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 162/400 (40%), Positives = 238/400 (59%), Gaps = 10/400 (2%)

Query: 43  ANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           A  +P+ IA   F    +L   ++ V++ DL+RS +F +++  ++ Q+  +   +P FQ 
Sbjct: 58  ARTAPIPIAIPSFGGGSQLAQDMAGVIAADLERSGLFRIVAPGAYPQQSGD---VPNFQS 114

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI 162
           W ++GAQ LVTG V   G   +RVEFRLWDV  ++QI G  + ++  +WR+I+H I+D I
Sbjct: 115 WGAIGAQALVTGNVSGSGGS-VRVEFRLWDVLPQQQIQGTAYTTTSGNWRRISHIIADVI 173

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y+ + GEKG F++RI++VS +         L VMD+D AN RYLT     +L  PRF P 
Sbjct: 174 YERMLGEKGYFDTRIVYVSNTGPRTNRTKRLAVMDQDSANNRYLTDGSWMVL-TPRFHPT 232

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           + ++ + +Y + +  RVY  +       + +G +  M  APRFS +G   ++S+ +    
Sbjct: 233 RDEIVFMSYAN-NRPRVYTFNLATG-GQRMLGEWPGMTFAPRFSPDGSSVVMSMTRGGGS 290

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V L      +LTN+  I+ S  +SPD SQIVF SDR G +QLYVM ++GS  +RIS
Sbjct: 291 DIYVVGLGGGGHRQLTNSGSIDTSPCFSPDGSQIVFNSDRGGDQQLYVMGADGSGVRRIS 350

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                 Y  PVWSP+GDLIAFT+     + IGVMK DGS ER+L +  +++ PT+ P+GR
Sbjct: 351 F-GSGRYATPVWSPRGDLIAFTRLGSSAWNIGVMKPDGSGERILAQGYDVEGPTFCPNGR 409

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            L+F     G    KL S+D+ G NE  + TP  ASDP W
Sbjct: 410 VLMFWSASGGR--QKLVSVDITGFNERPVPTPTDASDPAW 447


>gi|254512269|ref|ZP_05124336.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacteraceae
           bacterium KLH11]
 gi|221535980|gb|EEE38968.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacteraceae
           bacterium KLH11]
          Length = 439

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 175/442 (39%), Positives = 258/442 (58%), Gaps = 21/442 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHA---FVKVATNSANYSPVSIAFTKFV----SIDELGGKV 65
           MK+   L + L        +HA    +++  +     P+  A   FV    +  +    +
Sbjct: 2   MKLLTSLFVGLT--LLAAPVHAQSGPLRLEIDEGIIEPLPFAVPNFVPDGPAAAQYAQDI 59

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
           S V+  DL  + +F  IS D+F  ++++ D+  +F DW ++ AQ LVTG V   GK RL 
Sbjct: 60  SRVIVSDLTGTGLFREISADAFISRVSSFDAPVQFPDWKAINAQALVTGAVNVSGK-RLT 118

Query: 126 VEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           V FR+WDV   +++  G +F  +   WR++AH ++D +Y  ITGE   F+SR+ FVSES 
Sbjct: 119 VRFRVWDVFSGQELGNGLQFAGTTDGWRRMAHKVADQVYSRITGEGAYFDSRVAFVSESG 178

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                +  L +MD DGAN++YLT S   I+  PRFSP+  ++ Y +Y+     R+YL+D 
Sbjct: 179 PKDQRRKRLAIMDYDGANVQYLTDSA-AIVLAPRFSPSGDRLLYTSYETGQP-RIYLLDV 236

Query: 245 -RIDRA--PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            R+ R   P   G   +M  +PRFS +G+  + S+ +    D++ +DL +  + RLTNT 
Sbjct: 237 GRVQRQELPTEAG---TMSFSPRFSPDGRSIVYSLSQGGNTDLWKMDLATRQSVRLTNTP 293

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I  + SYSPD SQIVFESDR G  QLY+M + G +  RIS   +  Y  PVWSP+GDLI
Sbjct: 294 AIETAPSYSPDGSQIVFESDRSGSPQLYIMPATGGEATRISF-GQGRYGTPVWSPRGDLI 352

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYS 420
           AFTK +  +F IGVM+ +G +ERLL      + PTWSP+GR ++F+R+  G +G S LYS
Sbjct: 353 AFTKQNKGRFHIGVMRTNGDEERLLTASFLDEGPTWSPNGRVIMFTRETQGASGRSALYS 412

Query: 421 IDLNGRNETLINTPAYASDPQW 442
           +D++GRN   + TP   SDP W
Sbjct: 413 VDISGRNLRPVRTPDGGSDPSW 434


>gi|110679376|ref|YP_682383.1| translocation protein TolB [Roseobacter denitrificans OCh 114]
 gi|118574597|sp|Q167Z6|TOLB_ROSDO RecName: Full=Protein tolB; Flags: Precursor
 gi|109455492|gb|ABG31697.1| TolB protein, putative [Roseobacter denitrificans OCh 114]
          Length = 443

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 154/385 (40%), Positives = 241/385 (62%), Gaps = 6/385 (1%)

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
           ++  ++++V++ DL  + +F  I  D+F   +++  +  ++ DW ++ AQ L+TG V  +
Sbjct: 58  DVAAQITQVIAADLTGTGLFRQIEPDAFISTVSSFAAPIQYADWKAINAQALITGAVAVQ 117

Query: 120 GKDRLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
           G ++L V+FRL+DV    ++  G +F ++P  WR++AH ++D +Y  ITGE G F+SR++
Sbjct: 118 G-NQLNVKFRLYDVFSGAEMGDGLQFSATPDGWRRMAHKVADAVYSRITGEGGYFDSRVV 176

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +VSE+      +  L +MD DGAN++YLT S   I+  PRFSP+ Q++ Y +Y+     R
Sbjct: 177 YVSETGTKDARQKRLAIMDYDGANVKYLTDS-SSIVLAPRFSPDGQRILYTSYE-TGFPR 234

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +Y++D    +         +M  APRF+ +G+  + S+ +    DIY +++   +  RLT
Sbjct: 235 IYVLDVTSLQRRGLESQEGTMSFAPRFAPDGQTIVFSLSQGGNTDIYRMNVNGGSATRLT 294

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +   I  + SYSPD +QIVFESDR G +QLYVM +NG + +RIS      Y  PVWSP+G
Sbjct: 295 SAPSIETAPSYSPDGTQIVFESDRSGSQQLYVMPANGGEARRISFGP-GRYGTPVWSPRG 353

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SK 417
           DL+AFTK +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++FSR+  G  G + 
Sbjct: 354 DLVAFTKQNAGRFHIGVMRLDGSEERLLTASFLDEGPTWSPNGRVIMFSRETQGAQGRAT 413

Query: 418 LYSIDLNGRNETLINTPAYASDPQW 442
           LYS+D+ GRN   + TP   SDP W
Sbjct: 414 LYSVDITGRNLRPVRTPEGGSDPSW 438


>gi|254461647|ref|ZP_05075063.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacterales
           bacterium HTCC2083]
 gi|206678236|gb|EDZ42723.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 439

 Score =  299 bits (765), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 165/404 (40%), Positives = 250/404 (61%), Gaps = 14/404 (3%)

Query: 47  PVSIAFTKFVS----IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P+  A   FV+     +E   +++ VV  DL  + +F  + +D++  +IT+ D+  ++ D
Sbjct: 37  PMPFAAPNFVAESGAANEFAERLARVVVSDLAGTGLFREVPRDAYISQITSFDAPVQYVD 96

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDD 161
           W ++ AQ LVTG V   G + L V+FR++DV    +I  G +F  +   WR++AH ++D 
Sbjct: 97  WKAINAQALVTGAVNVSGSN-LSVKFRVYDVFSGTEIGSGLQFAGTTQGWRRMAHKVADQ 155

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +Y  ITGE+  F+SR+++VSE       +  L +MD DGAN++YLT S + ++  PRFSP
Sbjct: 156 VYARITGEQPYFDSRVVYVSEQGPKDKRRKRLAIMDYDGANVQYLTGS-EHLVLAPRFSP 214

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--SMILAPRFSSNGKRALISVQKD 279
              +V Y +Y+     R+Y+++  +    +R+   +  SM  APRFS +G+  + S+ + 
Sbjct: 215 TGDRVLYTSYET-GFPRIYVLE--VGSVKRRVLESQDGSMSFAPRFSPDGRTVVYSLARG 271

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              DI+ +D+ S ++ RLT+   I  + SYSPD S+IVFESDR G +Q+Y+M +NG + K
Sbjct: 272 GNTDIFRMDVASGSSVRLTSGPAIETAPSYSPDGSRIVFESDRSGSQQIYIMSANGGEAK 331

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           RIS  K   Y  PVWSP+GDLIAFTK S  +F IGVM+ DGS+ERLL      + PTWSP
Sbjct: 332 RISFGK-GRYGTPVWSPRGDLIAFTKQSKGRFHIGVMRTDGSEERLLTASFLDEGPTWSP 390

Query: 400 SGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTPAYASDPQW 442
           +GR ++F+R+  G  GS  LYS+D++GRN   I T   ASDP W
Sbjct: 391 NGRVIMFTRETQGSAGSASLYSVDISGRNLKRIPTEGGASDPSW 434


>gi|163733521|ref|ZP_02140964.1| translocation protein TolB precursor [Roseobacter litoralis Och
           149]
 gi|161393309|gb|EDQ17635.1| translocation protein TolB precursor [Roseobacter litoralis Och
           149]
          Length = 443

 Score =  299 bits (765), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 155/384 (40%), Positives = 237/384 (61%), Gaps = 6/384 (1%)

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           +  +++EV+S DL  + +F  I   +F   +++  +  ++ DW ++ AQ L+TG V  +G
Sbjct: 59  VAAQITEVISADLTGTGLFREIEPGAFISNVSSFAAPIQYADWKAINAQALITGAVAVQG 118

Query: 121 KDRLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
            ++L V+FRL+DV    ++  G +F ++P  WR++AH ++D +Y  ITGE G F+SR+++
Sbjct: 119 -NQLNVKFRLYDVFSGAEMGDGLQFSATPEGWRRMAHKVADAVYSRITGEGGYFDSRVVY 177

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           VSE+      +  L +MD DGAN++YLT S   I+  PRFSP+ Q+V Y +Y+     R+
Sbjct: 178 VSETGTKDARQKRLAIMDYDGANVKYLTDS-SSIVLAPRFSPDGQRVLYTSYET-GFPRI 235

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y++D    +         +M  APRF+ +G+  + S+ +    DIY +++      RLT 
Sbjct: 236 YVLDVTSVQRRALESQEGTMSFAPRFAPDGETIVFSLSQGGNTDIYRMNVNGGPATRLTA 295

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              I  + SYSPD +QIVFESDR G +QLYVM ++G + +RIS      Y  PVWSP+GD
Sbjct: 296 APSIETAPSYSPDGTQIVFESDRSGSQQLYVMPASGGEARRISFGP-GRYGTPVWSPRGD 354

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKL 418
           L+AFTK +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++FSR+  G  G + L
Sbjct: 355 LVAFTKQNAGRFHIGVMRLDGSEERLLTASFLDEGPTWSPNGRVIMFSRETQGAQGRATL 414

Query: 419 YSIDLNGRNETLINTPAYASDPQW 442
           YS+D+ GRN   + TP   SDP W
Sbjct: 415 YSVDITGRNLRPVRTPEGGSDPSW 438


>gi|126725523|ref|ZP_01741365.1| translocation protein TolB precursor [Rhodobacterales bacterium
           HTCC2150]
 gi|126704727|gb|EBA03818.1| translocation protein TolB precursor [Rhodobacterales bacterium
           HTCC2150]
          Length = 444

 Score =  299 bits (765), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 176/439 (40%), Positives = 258/439 (58%), Gaps = 16/439 (3%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----IDELGGKVSE 67
            + + L L  V++G  F  S    +++        P+ IA   FV+       L  ++S 
Sbjct: 9   GLILALTLSPVMMGTGFAQS--GPLRIEVTDGVIEPLPIAVPSFVAENAAAKNLAEEISR 66

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           VV  DL  S +F  + +++    +TN D+  R+ DW ++ AQ LVTG V  +GK R+ V+
Sbjct: 67  VVVSDLVGSGLFREVPREAHIANVTNFDAAVRYADWKAINAQGLVTGAVSVQGK-RVIVK 125

Query: 128 FRLWDV-KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           FRL+DV  D+    G +F  S  +WR++AH ++D  Y  ITGE   F+SR++FVSE+   
Sbjct: 126 FRLFDVFSDKPLGDGLQFAGSTDAWRRMAHKVADAAYSRITGEGPYFDSRVVFVSEAGPK 185

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G  +  L VMD DGAN++YLT S   I+  PRFSP   +V Y +Y+     R+Y +D  +
Sbjct: 186 GQRQKRLAVMDYDGANVQYLTDS-TSIVLGPRFSPTGDRVLYTSYETGSP-RIYALD--V 241

Query: 247 DRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               +R+ + ++  L+  PRF+ +G   + S  ++   DIY++ ++  A +RLT++  I+
Sbjct: 242 ASVSRRVLDSQAATLSFSPRFAPDGDTVVFSRSQNGNSDIYTMSVRGGAQKRLTSSPAID 301

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              SYSPD  QIVFESDR G +Q+YVM + G + KRIS      Y  PVWSP+GD IAFT
Sbjct: 302 TGPSYSPDGKQIVFESDRSGNQQIYVMPAGGGEPKRISFGA-GRYGTPVWSPRGDYIAFT 360

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDL 423
           K +  +F IGVM+ DGS+ERLL      + PTW+P+GR ++F R+  G  G S LYS+DL
Sbjct: 361 KQNKGRFHIGVMRTDGSEERLLTSSFLDEGPTWAPNGRVIMFMRETSGANGTSSLYSVDL 420

Query: 424 NGRNETLINTPAYASDPQW 442
            GRN   + TP  ASDP W
Sbjct: 421 TGRNLKRVPTPLGASDPAW 439


>gi|149915620|ref|ZP_01904146.1| translocation protein TolB precursor [Roseobacter sp. AzwK-3b]
 gi|149810512|gb|EDM70355.1| translocation protein TolB precursor [Roseobacter sp. AzwK-3b]
          Length = 440

 Score =  298 bits (764), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 173/444 (38%), Positives = 261/444 (58%), Gaps = 14/444 (3%)

Query: 13  MKINLCLLLVLIGGFFP-TSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSE 67
           M+  L LL VL+    P T+    +++        P+  A   FVS      E G +++E
Sbjct: 2   MRYILSLLTVLMLWSLPATAQTGPLRIEITEGVIEPLPFAAPDFVSDSTTGAEFGRRIAE 61

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V++ DL  + +F  I  ++F  ++T+  S  ++ DW ++ AQ LVTG V  +   +L V 
Sbjct: 62  VIAADLTGTGLFREIQPEAFISRVTSFSSPVQYADWKAINAQALVTGAVSVDAGGQLVVR 121

Query: 128 FRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           FRL+DV   +++  G +   +   WR+IAH ++D IY  ITGE   F+SR+++V+E+   
Sbjct: 122 FRLYDVFAGQELGQGLQLVGTQDGWRRIAHKVADQIYSRITGEAPYFDSRVVYVAETGPK 181

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L +MD DGAN+ YLT S   I+  PRFSP+ ++V Y +Y+     R+Y++  ++
Sbjct: 182 DQRIKRLAIMDYDGANVSYLTDSAS-IVLAPRFSPDGRQVLYTSYE-SGFPRIYVL--QV 237

Query: 247 DRAPKRIGNFR--SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             A +R+   +  +M  APRF+ +G+R + S+      D+Y +D+ S  + RLTN   I 
Sbjct: 238 GSAQRRVLEQQDGTMSFAPRFAPDGRRVVYSLSSGGNTDLYMMDIGSGTSTRLTNAPSIE 297

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + S+SPD S+IVFESDR G  QLY+M S G + +RIS   +  Y  PVWSP+GDLIAFT
Sbjct: 298 TAPSFSPDGSRIVFESDRSGSPQLYIMPSAGGEAQRISFG-QGRYGTPVWSPRGDLIAFT 356

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-KLYSIDL 423
           K S  +F IGV++ DGS+ERLL      + PTWSP+GR ++F+R+  G  GS  LYS+D+
Sbjct: 357 KQSKGRFHIGVIRTDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGAQGSASLYSVDI 416

Query: 424 NGRNETLINTPAYASDPQWVGFMD 447
           +GRN   + T A  SDP W    D
Sbjct: 417 SGRNLRKVPTEAGGSDPSWSPLQD 440


>gi|315498693|ref|YP_004087497.1| tol-pal system beta propeller repeat protein tolb [Asticcacaulis
           excentricus CB 48]
 gi|315416705|gb|ADU13346.1| Tol-Pal system beta propeller repeat protein TolB [Asticcacaulis
           excentricus CB 48]
          Length = 436

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 170/428 (39%), Positives = 247/428 (57%), Gaps = 5/428 (1%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           +     L L G        A ++        +P+ IA     S  +LG K++ VV  DL+
Sbjct: 9   VAFATFLALTGAPLAAFAQAPIRAEVAEGVIAPMPIAIDIESSGSDLGDKITRVVMADLE 68

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           RS  F  I  ++F ++    D+ P F  W ++ AQ L  G    +G+ RL+V+FRLWDV 
Sbjct: 69  RSGFFKPIDPNAFIEQSVGIDATPTFASWKTINAQALANGAARVDGEGRLQVDFRLWDVF 128

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ++G+   ++P +WR+IAH I+D IY+ +TGE+G F++RI+FV+ES   G     L 
Sbjct: 129 SEKQLLGQSVTATPENWRRIAHKIADAIYEKLTGEEGYFDTRIVFVAESGARGKRVKRLA 188

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD+DGAN  YLT    +++  PRFS + Q+VAY     ED  R+Y+ +    R  + +G
Sbjct: 189 IMDQDGANPSYLTDGSYKVM-TPRFSADSQEVAYMVL-REDSARIYVFNIETGRQ-EAVG 245

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             + M+ APRFS +G +   SV +    DIY +DL++ AT R+T    I+ S S+SPD S
Sbjct: 246 QIKGMVFAPRFSPDGSKLAYSVAQGGNTDIYVMDLRTRATRRVTTDPGIDTSPSFSPDGS 305

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            IVF SDR G  QLY M ++GS  +RIS      Y  PV+SP+GD IAFTK SG +F+IG
Sbjct: 306 TIVFNSDRGGSPQLYAMNADGSGVRRISFGG-GIYSTPVFSPKGDKIAFTKQSGGRFSIG 364

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           VM   G  E+LL      + PTW+P+GR ++F R+  G   S L+ ++ +GR E  +   
Sbjct: 365 VMDAGGGNEKLLTSSFLEEGPTWAPNGRYIMFFREPPGALPS-LWMVEASGRIERQVPYS 423

Query: 435 AYASDPQW 442
             ASDP W
Sbjct: 424 GGASDPAW 431


>gi|304320242|ref|YP_003853885.1| translocation protein TolB precursor [Parvularcula bermudensis
           HTCC2503]
 gi|303299144|gb|ADM08743.1| translocation protein TolB precursor [Parvularcula bermudensis
           HTCC2503]
          Length = 442

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 165/406 (40%), Positives = 239/406 (58%), Gaps = 8/406 (1%)

Query: 47  PVSIAFTKFVSIDELGGKVS----EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P+ +A   F++  E   +VS    EV+  DL  S +F  I   +F Q++ + ++ PRF D
Sbjct: 40  PMPVALPAFIATGEGAERVSADLSEVIRDDLASSSLFAPIDPAAFIQQLQSVNTPPRFAD 99

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDD 161
           W ++ A+VL+ G V      R++V  RLWDV   KQ+ G   F +PA+  RK  H I+D 
Sbjct: 100 WRAIDARVLLVGEVTALSGGRIQVAARLWDVGASKQL-GTIAFKTPATNVRKAGHEIADF 158

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +Y+ +TGE G F+++I++V+ES      +  L +MD+DGAN   LT   +     PRFSP
Sbjct: 159 VYEQLTGEPGYFDTKIVYVAESGPKTDRRKRLMIMDQDGANPSILTDGLNFDALTPRFSP 218

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            QQ++ +    D+   +VYL D       + +G++R M  APRFS++G+  L+S+++   
Sbjct: 219 TQQQIIFLAMFDDRPSQVYLYDIETTEM-EALGSWRGMTFAPRFSTDGRGVLLSIEEAGN 277

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DI  +DL +   ERLT    I+ S S SPD   I F SDR G +Q+YVM ++GSDQ+RI
Sbjct: 278 TDIARMDLITRRIERLTRNPAIDTSPSMSPDGRHITFASDRGGSQQIYVMNADGSDQRRI 337

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           +     +Y  PVWSP+GDLIAFT+    +F IGV+K DG+ ERLL E    + PTWSP+G
Sbjct: 338 TF-GNGTYGTPVWSPRGDLIAFTRLYRGRFYIGVVKPDGTGERLLTESYLDEGPTWSPNG 396

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           R ++F R+        LYSIDL GRN   + T   ASDP W   +D
Sbjct: 397 RVIMFFRENRPGGPVNLYSIDLTGRNLRRVETSTEASDPAWSPLLD 442


>gi|254477250|ref|ZP_05090636.1| Tol-Pal system beta propeller repeat protein TolB [Ruegeria sp.
           R11]
 gi|214031493|gb|EEB72328.1| Tol-Pal system beta propeller repeat protein TolB [Ruegeria sp.
           R11]
          Length = 446

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 169/404 (41%), Positives = 246/404 (60%), Gaps = 14/404 (3%)

Query: 47  PVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P+  A   FV    +  EL  ++S V++ DL  + +F  I   +   KI+N DS   + D
Sbjct: 44  PLPYAVPDFVPETPAAAELAREISRVIAADLSGTGLFREIPASAHISKISNFDSPVSYAD 103

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDD 161
           W ++ AQ L+TG +   G +RL V FR  DV   K++  G +F  +   WR++AH ++D 
Sbjct: 104 WKAINAQALITGGLSVNG-NRLTVRFRGHDVFAEKELGSGLQFAGTTDGWRRMAHKVADV 162

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           IY  ITGE G F+SR++FVSES      +  L +MD DGAN++YLT S   I+  PRFSP
Sbjct: 163 IYNRITGESGYFDSRVVFVSESGPKNDRRKRLAIMDYDGANVQYLTNSA-SIVLAPRFSP 221

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRALISVQKD 279
              +V Y +Y+     +++++D  +    +R+ +  + I+  APRF+ +G+  + S  + 
Sbjct: 222 TGDRVLYTSYE-SGFPQIHVLD--VGSVQRRVLSSDNGIMSFAPRFAPDGRTVVYSQAQG 278

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              DIY++D+ S A +RLT+   I  + SYSPD SQIVFESDR G  QLYVM ++G + +
Sbjct: 279 GNTDIYTLDINSGARQRLTSAPSIETAPSYSPDGSQIVFESDRSGAPQLYVMPASGGEAR 338

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           RIS      Y  PVWSP+GDLIAFTK +  +F IGVM+ DGS+ERLL      + PTWSP
Sbjct: 339 RISFGA-GRYGTPVWSPRGDLIAFTKQNKGRFHIGVMRTDGSEERLLTASFLDEGPTWSP 397

Query: 400 SGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
           +GR ++F+R+  G+ G + LYS+D+ GRN   + TP  ASDP W
Sbjct: 398 NGRVIMFTRETQGENGRALLYSVDITGRNLKPVRTPDGASDPAW 441


>gi|148261881|ref|YP_001236008.1| TolB domain-containing protein [Acidiphilium cryptum JF-5]
 gi|146403562|gb|ABQ32089.1| TolB, N-terminal domain protein [Acidiphilium cryptum JF-5]
          Length = 469

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 162/414 (39%), Positives = 247/414 (59%), Gaps = 15/414 (3%)

Query: 38  VATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSF-KQKIT 92
           +  + A+ +P+ IA   F     +  ++G ++++VV+ DL    +F+ I   SF    + 
Sbjct: 57  INVSGAHNAPIPIALPAFTDASGNTSDIGAQITQVVTSDLDHCGLFSAIDPTSFVPNSVV 116

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
           N  S+P + +W+ LGAQ LVTG+V   G  ++RVE+RLW +  +KQ+ G  + ++  +WR
Sbjct: 117 N--SVPVWNNWSILGAQALVTGQVTSPGAGQIRVEYRLWGISQQKQLQGTAYTTASGNWR 174

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +IAH I+DDIYQ + GEKG F++R+ F+S S         + +MD DGAN+R+LT  R+ 
Sbjct: 175 RIAHIIADDIYQQMIGEKGYFDTRVAFISVSGPPTSPIRRMALMDYDGANVRFLTSGRNM 234

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            L  P+F+P +Q++A+ ++++    +VYL D +   A   IG+F  M   PRFS +G   
Sbjct: 235 AL-SPQFNPTRQQLAFVSFENNRP-QVYLFDLQTG-ARTNIGSFGDMSFGPRFSPDGSAL 291

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--EQLYV 330
           L S+ K     I   DL S    +LT+   IN++  YSPD ++IVF SDR+G   +QL+V
Sbjct: 292 LFSISKGGGAMIVKYDLGSRRMTQLTDANSINVTPCYSPDGTKIVFNSDRDGSGDQQLFV 351

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M ++GS+ +RIS    A Y +P WSP+GD IAFT+     F IGVMK DGS ERLL +  
Sbjct: 352 MNADGSNVQRISY-GHARYAEPDWSPRGDAIAFTRLDSSGFGIGVMKPDGSGERLLSQGY 410

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTG--SKLYSIDLNGRNETLINTPAYASDPQW 442
             +  T+ P+GR ++F R+     G  S L +I ++G NE +  TP  A DP W
Sbjct: 411 LEEGATFCPNGRVIMFYRQSPLRVGNVSHLVTIGVDGFNERITPTPTNAEDPSW 464


>gi|84501652|ref|ZP_00999824.1| translocation protein TolB precursor [Oceanicola batsensis
           HTCC2597]
 gi|84390273|gb|EAQ02832.1| translocation protein TolB precursor [Oceanicola batsensis
           HTCC2597]
          Length = 443

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 165/409 (40%), Positives = 247/409 (60%), Gaps = 14/409 (3%)

Query: 47  PVSIAFTKFVSID----ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P+  A   FV  +    E+  +++ VVS DL  + +F  I Q++   ++T+  S  ++ D
Sbjct: 41  PLPFAVPDFVPENGASAEMAAQITRVVSDDLTGTGLFREIPQNAHIARVTSFSSPVQYAD 100

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDD 161
           W ++ AQ L+TG V   G DR+ V+FRL+DV   +++  G +F  + A WR++AH ++D 
Sbjct: 101 WKAINAQALITGAVGVTG-DRVNVKFRLYDVFSGQEMGDGLQFSGTTAGWRRMAHKVADA 159

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +Y  ITGE   F+SR+++VSE+      +  L +MD DGAN++YLT S   I+  PRFSP
Sbjct: 160 VYSRITGEGPYFDSRVVYVSETGPKNDRRKRLAIMDYDGANVQYLTDS-SSIVLAPRFSP 218

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--RSMILAPRFSSNGKRALISVQKD 279
              +V Y +Y+     ++Y++D  +    +R  N    +M  APRF  +G+  + S+ + 
Sbjct: 219 TGDRVLYTSYE-TGFPKIYVLD--VASVGRRTLNTPEGTMSFAPRFHPDGQTVVYSLTQG 275

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              DI+S+D+ S  + RLT    I  + S+SPD SQIVFESDR G +QLY+M   G +  
Sbjct: 276 GNTDIFSLDINSGQSTRLTQAPSIETAPSFSPDGSQIVFESDRSGTQQLYIMPVGGGEPT 335

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           RIS   +  Y  PVWSP+GDLIAFTK S  +F IGVM+ DGS+ERLL      + PTW+P
Sbjct: 336 RISF-GQGRYGTPVWSPRGDLIAFTKQSKGRFHIGVMRTDGSEERLLTASFLDEGPTWAP 394

Query: 400 SGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           +GR ++F+R+  G+ GS  LYS+D++GRN   + T   ASDP W    D
Sbjct: 395 NGRVIMFTRETQGEQGSASLYSVDISGRNLKRVRTEGAASDPSWSPLQD 443


>gi|326405385|ref|YP_004285467.1| protein TolB [Acidiphilium multivorum AIU301]
 gi|325052247|dbj|BAJ82585.1| protein TolB [Acidiphilium multivorum AIU301]
          Length = 469

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 162/414 (39%), Positives = 247/414 (59%), Gaps = 15/414 (3%)

Query: 38  VATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSF-KQKIT 92
           +  + A+ +P+ IA   F     +  ++G ++++VV+ DL    +F+ I   SF    + 
Sbjct: 57  INVSGAHNAPIPIALPAFTDASGNTSDIGAQITQVVTSDLDHCGLFSAIDPTSFVPNSVV 116

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
           N  S+P + +W+ LGAQ LVTG+V   G  ++RVE+RLW +  +KQ+ G  + ++  +WR
Sbjct: 117 N--SVPVWNNWSILGAQALVTGQVTSPGAGQIRVEYRLWGISQQKQLQGTAYTTASGNWR 174

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +IAH I+DDIYQ + GEKG F++R+ F+S S         + +MD DGAN+R+LT  R+ 
Sbjct: 175 RIAHIIADDIYQQMIGEKGYFDTRVAFISVSGPPTSPIRRMALMDYDGANVRFLTSGRNM 234

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            L  P+F+P +Q++A+ ++++    +VYL D +   A   IG+F  M   PRFS +G   
Sbjct: 235 AL-SPQFNPTRQQLAFVSFENNR-PQVYLFDLQTG-ARTNIGSFGDMSFGPRFSPDGSAL 291

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--EQLYV 330
           L S+ K     I   DL S    +LT+   IN++  YSPD ++IVF SDR+G   +QL+V
Sbjct: 292 LFSISKGGGAMIVKYDLGSRRMTQLTDANSINVTPCYSPDGTKIVFNSDRDGSGDQQLFV 351

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M ++GS+ +RIS    A Y +P WSP+GD IAFT+     F IGVMK DGS ERLL +  
Sbjct: 352 MNADGSNVQRISY-GHARYAEPDWSPRGDAIAFTRLDSSGFGIGVMKPDGSGERLLSQGY 410

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTG--SKLYSIDLNGRNETLINTPAYASDPQW 442
             +  T+ P+GR ++F R+     G  S L +I ++G NE +  TP  A DP W
Sbjct: 411 LEEGATFCPNGRVIMFYRQSPLRVGNVSHLVTIGVDGFNERITPTPTNAEDPSW 464


>gi|99082205|ref|YP_614359.1| translocation protein TolB [Ruegeria sp. TM1040]
 gi|118574598|sp|Q1GE19|TOLB_SILST RecName: Full=Protein tolB; Flags: Precursor
 gi|99038485|gb|ABF65097.1| TolB-like protein [Ruegeria sp. TM1040]
          Length = 441

 Score =  296 bits (757), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 162/381 (42%), Positives = 238/381 (62%), Gaps = 8/381 (2%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           ++ V+++DL  S +F  I + ++    T+ D+   F DW ++ AQ L+ G V   G DR+
Sbjct: 61  IARVIAQDLVGSGLFREIPKVAYISPYTDFDAEVNFTDWKAINAQALIAGAVSLSG-DRI 119

Query: 125 RVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            V FR +DV   +++  G +   +   WR+IAH ++D IY  +TGE G F+SR++FVSE+
Sbjct: 120 TVRFRGYDVFAGQELGAGLQLSGTTDGWRRIAHKVADTIYSRLTGEGGYFDSRVVFVSET 179

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                 K  L +MD DGAN++YLT S D I+  PRFSP   +V Y +Y+     +++++D
Sbjct: 180 GPKNDRKKRLAIMDYDGANVQYLTNS-DAIVLAPRFSPTGDRVLYTSYE-SGFPQIHVLD 237

Query: 244 T-RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             R+ R     GN  SM  APRF+ NG+  + S  +    D++S+D+ S   +RLT+   
Sbjct: 238 VGRVQRRVLSAGN-GSMSFAPRFAPNGQTIVYSQSQGGNTDLFSMDINSGNPQRLTSAPS 296

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I  + S+SPD SQIVFESDR G  QLYVM ++G + KRIS   +  Y  PVWSP+GD IA
Sbjct: 297 IETAPSFSPDGSQIVFESDRSGTSQLYVMSASGGEAKRISF-GQGRYGTPVWSPRGDYIA 355

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSI 421
           FTK +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++F+R+  G +G ++LYS+
Sbjct: 356 FTKQNAGRFHIGVMRTDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGASGQARLYSV 415

Query: 422 DLNGRNETLINTPAYASDPQW 442
           D++GRN   + TP  ASDP W
Sbjct: 416 DISGRNLKPVKTPDGASDPSW 436


>gi|260576644|ref|ZP_05844631.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacter sp.
           SW2]
 gi|259021129|gb|EEW24438.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacter sp.
           SW2]
          Length = 445

 Score =  296 bits (757), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 173/440 (39%), Positives = 258/440 (58%), Gaps = 24/440 (5%)

Query: 17  LCLLLVLIGG--FFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG----GKVSEVVS 70
           +   L L GG  F   +    +++  N+    P+  A   FV+ +  G     K+S V++
Sbjct: 11  IAFSLALFGGVTFAQLAQAEPLRIELNNPVIEPMPFAVPDFVAENGGGEDYAAKISRVIA 70

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL  + +F  I   +   ++T+ D+   + DW ++ AQ L+TG V   G D++ V+FRL
Sbjct: 71  ADLAGTGLFAEIPAAAHIARVTSFDAPVSYPDWKAINAQALITGAVQASG-DQIVVKFRL 129

Query: 131 WDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           +DV   +Q+  G +F  +  SWR++AH ++D  Y  ITGE G F+SR++FVSES      
Sbjct: 130 FDVFSGQQMGEGLQFAGTAQSWRRMAHKVADAAYARITGEGGYFDSRVVFVSESGPKNQR 189

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-----T 244
              L VMD DGAN+ YLT S   I+  PRFSP+  ++ + +Y      ++YLMD     T
Sbjct: 190 AKRLGVMDYDGANVAYLTDSAS-IVLAPRFSPSGDRILFTSYT-SGFPQIYLMDVGSLQT 247

Query: 245 R-IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           R ++  P       +M  APRF+ +G+  + S+++    DIY+VD QS    +LT+   I
Sbjct: 248 RSLEEQPG------TMTFAPRFAPDGRTVVFSLERGGNTDIYTVDTQSGTLSQLTDAPSI 301

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + SYSPD S+IVFESDR G +QLYVM + G + +RIS +    Y  PVWSP+GD IAF
Sbjct: 302 ETAPSYSPDGSKIVFESDRSGTQQLYVMSAGGGEPRRIS-NGAGRYGTPVWSPRGDYIAF 360

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSID 422
           TK +  +F IGVM  DGS+E+LL      + PTW+P+GR ++F+R++ G+ G   LYS+D
Sbjct: 361 TKQNEGRFHIGVMLTDGSEEKLLTASFLDEGPTWAPNGRVIMFTREQAGEGGQPALYSVD 420

Query: 423 LNGRNETLINTPAYASDPQW 442
           ++GRN   I+T   ASDP W
Sbjct: 421 ISGRNLRQISTETPASDPAW 440


>gi|310816577|ref|YP_003964541.1| translocation protein TolB precursor [Ketogulonicigenium vulgare
           Y25]
 gi|308755312|gb|ADO43241.1| translocation protein TolB precursor [Ketogulonicigenium vulgare
           Y25]
          Length = 442

 Score =  295 bits (756), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 171/444 (38%), Positives = 249/444 (56%), Gaps = 19/444 (4%)

Query: 11  LNMKINLCLLLVLIGGF--FPT-SIHAFVKVATNSANYSPVSIAFTKF----VSIDELGG 63
           +N  + L L   L G F   P  +    +++        P+ IA   F        E+  
Sbjct: 1   MNKFMALVLTAALAGPFAAMPALAQQGPLRITVTQGVIEPLPIAVPTFQAETAGAAEVAN 60

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           ++S +V++DL  S +F  +   SF       D    + DW ++  Q LVTG V   G ++
Sbjct: 61  QISRLVAQDLTGSGLFREVPASSFISNHAMFDQAVAYADWRAINVQGLVTGAVSVSG-NQ 119

Query: 124 LRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           L V+FRL+D+    ++  G +F  S   WR++AH +SD +Y  ITGE G F+SR++FV+E
Sbjct: 120 LTVKFRLYDIYTGAELGQGLQFNGSVQGWRRMAHKVSDAVYSRITGESGYFDSRVVFVAE 179

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S         + +MD DGAN++YLT + + ++  PRFSP   ++ Y +Y      R+ L+
Sbjct: 180 SGPKDNRLKRVAIMDYDGANVQYLTDA-NSLVLAPRFSPTGAQILYTSYQ-SGAPRINLL 237

Query: 243 DTRIDRA---PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           D     A   P  +G    M  +PRFS +G   + S+      DIY  D+++    RLTN
Sbjct: 238 DVASASARQLPTEVGE---MAFSPRFSRDGGSVIYSLANGGNTDIYRTDIRTGGHTRLTN 294

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              I  S S SPD SQIVFESDR G  QLYVM +NG + +RIS   +  Y  PVWSP+GD
Sbjct: 295 APSIETSPSLSPDGSQIVFESDRSGTTQLYVMGANGGEARRISFG-DGRYGTPVWSPRGD 353

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-KL 418
           +IAFTK  G +F IGVM+ DGS+ERLL      + PTW+P+GR L+F+R+  G+TG   +
Sbjct: 354 MIAFTKQQGGRFHIGVMRTDGSEERLLTSSFLDEGPTWAPNGRMLMFTRETQGETGGPSI 413

Query: 419 YSIDLNGRNETLINTPAYASDPQW 442
           YS+D++GRN   + T ++ASDP W
Sbjct: 414 YSVDISGRNLRQVATGSFASDPSW 437


>gi|114771186|ref|ZP_01448606.1| translocation protein TolB precursor [alpha proteobacterium
           HTCC2255]
 gi|114548111|gb|EAU50998.1| translocation protein TolB precursor [alpha proteobacterium
           HTCC2255]
          Length = 441

 Score =  295 bits (756), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 167/407 (41%), Positives = 250/407 (61%), Gaps = 13/407 (3%)

Query: 47  PVSIAFTKFVSIDELG----GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P+ IA ++F +I +       +++ V+  DL  S +F  I + +     TN ++  +F D
Sbjct: 40  PMPIALSQFTAIGDTTPQYVDQITSVIMADLVGSGLFREIPRSAHVSANTNFNNPVKFSD 99

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDD 161
           W  +    L+TG V  +G D+L ++FRL+DV  +K +  G +F +S  +WR++AH ISD 
Sbjct: 100 WRVINVDALITGSVNIQG-DKLILQFRLFDVFAQKPLGEGLQFQASIGNWRRMAHKISDA 158

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +Y  +TGE   F+SR++++SE       K  L +MD DGAN R+LT   D I+  PRFSP
Sbjct: 159 VYSRLTGEAAYFDSRVVYISEQGPKNARKKRLTIMDYDGANSRFLTDDND-IVLAPRFSP 217

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQKDE 280
           N +++ Y +Y+   + +VYLM+  +D   KR+ + +  M  APRFS +G+  ++S+    
Sbjct: 218 NNEEIVYTSYE-TGVPKVYLMN--VDTLNKRVLDDQPGMTFAPRFSPDGRNVVMSLTDRG 274

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             DIYSV L+S    RLT+   I+ + S+SPD  QIVFESDR G++Q+Y+M S+G D  R
Sbjct: 275 NTDIYSVVLESRRKTRLTSGPSIDTAPSFSPDGKQIVFESDRGGRQQIYIMSSSGGDATR 334

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           IS  K  SY  PVWSP+GD+IAFTK S  +F IGVM+ DGS ERLL      + PTWSP+
Sbjct: 335 ISFGK-GSYGTPVWSPRGDMIAFTKISQGRFHIGVMRTDGSNERLLTASFLDEGPTWSPN 393

Query: 401 GRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           GR ++F R+  G  G+ +++S+D+ GRN   + T    SDP W G +
Sbjct: 394 GRVIMFFRESAGTNGAPEIFSVDVTGRNLKRVKTIQNGSDPSWSGLL 440


>gi|221640124|ref|YP_002526386.1| translocation protein TolB [Rhodobacter sphaeroides KD131]
 gi|221160905|gb|ACM01885.1| Protein tolB precursor [Rhodobacter sphaeroides KD131]
          Length = 435

 Score =  295 bits (755), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 164/402 (40%), Positives = 235/402 (58%), Gaps = 10/402 (2%)

Query: 47  PVSIAFTKFVS----IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P+  A   FV+      EL   ++ V++ DL  + +F  I   +   ++T+ ++   + D
Sbjct: 33  PLPFAVPDFVAENAGASELARDMARVIASDLSGTGLFREIPASAHISRVTSFEAPVAYGD 92

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV-KDRKQIIGKKFFSSPASWRKIAHTISDD 161
           W ++ AQ L+TG V   G DR+ V+FRL+DV  D+    G +F  S + WR++AH ++D 
Sbjct: 93  WKAINAQALITGSVSASG-DRVVVKFRLYDVFSDQPLGEGLQFAGSASGWRRMAHKVADV 151

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            Y  ITGE G F+SR++FVSES         L VMD DGAN++YLT S   I+  PRFSP
Sbjct: 152 AYSRITGEGGYFDSRVVFVSESGPKNARAKRLAVMDYDGANVQYLTDS-SSIVLAPRFSP 210

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
              ++ + +Y      R+YLMD              +M  APRF+ +G+    S+++   
Sbjct: 211 TGDRILFTSYS-TGFPRIYLMDVGSLATRGLAEQPGTMTFAPRFAPDGRTVAFSLEQGGN 269

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIY++D  S    +LTN+  I  + SYSPD SQIVFESDR G +QLY+M + G + +RI
Sbjct: 270 TDIYTLDTGSGTRRQLTNSPSIETAPSYSPDGSQIVFESDRSGGQQLYIMPAGGGEPRRI 329

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           S +    Y  PVWSP+GDLIAFTK    +F IGVM+ DGS+ERLL      + PTW+P+G
Sbjct: 330 S-NGAGRYGTPVWSPRGDLIAFTKQHQGRFHIGVMRTDGSEERLLTASFLDEGPTWAPNG 388

Query: 402 RSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
           R L+F+R+  G  G   LYS+D++GRN   +     ASDP W
Sbjct: 389 RVLMFTREGAGAGGQPALYSVDISGRNLKKVPLSVPASDPAW 430


>gi|77464240|ref|YP_353744.1| translocation protein TolB [Rhodobacter sphaeroides 2.4.1]
 gi|126463082|ref|YP_001044196.1| translocation protein TolB [Rhodobacter sphaeroides ATCC 17029]
 gi|332559129|ref|ZP_08413451.1| translocation protein TolB [Rhodobacter sphaeroides WS8N]
 gi|119371057|sp|Q3J041|TOLB_RHOS4 RecName: Full=Protein tolB; Flags: Precursor
 gi|166229984|sp|A3PM58|TOLB_RHOS1 RecName: Full=Protein tolB; Flags: Precursor
 gi|77388658|gb|ABA79843.1| Probable TolB protein precursor [Rhodobacter sphaeroides 2.4.1]
 gi|126104746|gb|ABN77424.1| TolB, N-terminal domain protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|332276841|gb|EGJ22156.1| translocation protein TolB [Rhodobacter sphaeroides WS8N]
          Length = 444

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 164/402 (40%), Positives = 235/402 (58%), Gaps = 10/402 (2%)

Query: 47  PVSIAFTKFVS----IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P+  A   FV+      EL   ++ V++ DL  + +F  I   +   ++T+ ++   + D
Sbjct: 42  PLPFAVPDFVAENAGASELARDMARVIASDLSGTGLFREIPASAHISRVTSFEAPVAYGD 101

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV-KDRKQIIGKKFFSSPASWRKIAHTISDD 161
           W ++ AQ L+TG V   G DR+ V+FRL+DV  D+    G +F  S + WR++AH ++D 
Sbjct: 102 WKAINAQALITGSVSASG-DRVVVKFRLYDVFSDQPLGEGLQFAGSASGWRRMAHKVADV 160

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            Y  ITGE G F+SR++FVSES         L VMD DGAN++YLT S   I+  PRFSP
Sbjct: 161 AYSRITGEGGYFDSRVVFVSESGPKNARAKRLAVMDYDGANVQYLTDS-SSIVLAPRFSP 219

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
              ++ + +Y      R+YLMD              +M  APRF+ +G+    S+++   
Sbjct: 220 TGDRILFTSYS-TGFPRIYLMDVGSLATRGLAEQPGTMTFAPRFAPDGRTVAFSLEQGGN 278

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIY++D  S    +LTN+  I  + SYSPD SQIVFESDR G +QLY+M + G + +RI
Sbjct: 279 TDIYTLDTGSGTRRQLTNSPSIETAPSYSPDGSQIVFESDRSGGQQLYIMPAGGGEPRRI 338

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           S +    Y  PVWSP+GDLIAFTK    +F IGVM+ DGS+ERLL      + PTW+P+G
Sbjct: 339 S-NGAGRYGTPVWSPRGDLIAFTKQHQGRFHIGVMRTDGSEERLLTASFLDEGPTWAPNG 397

Query: 402 RSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
           R L+F+R+  G  G   LYS+D++GRN   +     ASDP W
Sbjct: 398 RVLMFTREGAGAGGQPALYSVDISGRNLKKVPLSVPASDPAW 439


>gi|260431108|ref|ZP_05785079.1| Tol-Pal system beta propeller repeat protein TolB [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260414936|gb|EEX08195.1| Tol-Pal system beta propeller repeat protein TolB [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 439

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 161/381 (42%), Positives = 237/381 (62%), Gaps = 8/381 (2%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S V++ DL  + +F  I+ ++F  ++ + ++  +F DW ++ A  LVTG V   G + L
Sbjct: 59  ISRVIAADLTGTGLFREIAPEAFISRVNSFEAPIQFADWKAINADALVTGAVNLSG-NTL 117

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPA-SWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            V FR+WDV   +++     FS P   WR++AH ++D +Y  ITGE G F+SR+ FVSES
Sbjct: 118 TVRFRVWDVFSGQELGNGLQFSGPTDGWRRMAHKVADQVYSRITGEGGYFDSRVAFVSES 177

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                 +  L +MD DGAN++YLT S   I+  PRFSP   ++ Y +Y+     R+YL+D
Sbjct: 178 GPKDQRRKRLAIMDYDGANVQYLTDSA-AIVLAPRFSPAGDRLLYTSYESGRP-RIYLLD 235

Query: 244 T-RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             R+ +   +  +  +M  +PRFS +G+  + S+ +    D++ +DL S  + RLTNT  
Sbjct: 236 VGRVKKQELKTQD-GTMSFSPRFSPDGRSIVYSLTQGGNTDLWKMDLASGQSVRLTNTPA 294

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I  + SY+PD S+IVFESDR G  QLYVM +NG +  RIS   +  Y  PVWSP+GDLIA
Sbjct: 295 IETAPSYAPDGSRIVFESDRSGTPQLYVMPANGGEATRISF-GQGRYGTPVWSPRGDLIA 353

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSI 421
           FTK +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++F+R+  G +G S LYS+
Sbjct: 354 FTKQNKGRFHIGVMRVDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGASGRSSLYSV 413

Query: 422 DLNGRNETLINTPAYASDPQW 442
           D++GRN   + TP   SDP W
Sbjct: 414 DISGRNLRPVRTPDGGSDPSW 434


>gi|146276614|ref|YP_001166773.1| translocation protein TolB [Rhodobacter sphaeroides ATCC 17025]
 gi|166229985|sp|A4WQ04|TOLB_RHOS5 RecName: Full=Protein tolB; Flags: Precursor
 gi|145554855|gb|ABP69468.1| TolB, N-terminal domain protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 444

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 163/402 (40%), Positives = 234/402 (58%), Gaps = 10/402 (2%)

Query: 47  PVSIAFTKFVS----IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P+  A   FV+      +L   ++ V++ DL  + +F  I   +   ++T+ D+   + D
Sbjct: 42  PLPFAVPNFVAETSGASQLAQDMARVIAADLSGTGLFREIPASAHISRVTSFDAPIAYND 101

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV-KDRKQIIGKKFFSSPASWRKIAHTISDD 161
           W ++ AQ L+TG V   G DR+ V+FRL DV  D+    G +F  S + WR++AH ++D 
Sbjct: 102 WKAINAQALITGSVSASG-DRVVVKFRLHDVFSDQPLGEGLQFAGSASGWRRMAHKVADV 160

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            Y  ITGE G F+SR++FVSE+         L VMD DGAN++YLT S   I+  PRFSP
Sbjct: 161 AYSRITGEGGYFDSRVVFVSETGPKNARAKRLAVMDYDGANVQYLTDS-SSIVLAPRFSP 219

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
              ++ + +Y      R+YLMD              +M  APRF+ +G+    S+++   
Sbjct: 220 TGDRILFTSYS-TGFPRIYLMDVGSLATRSLAEQPGTMTFAPRFAPDGRTVAFSLEQGGN 278

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIY++D  S    +LTN+  I  + SYSPD SQIVFESDR G +QLY+M + G + +RI
Sbjct: 279 TDIYTLDTASGTRRQLTNSPSIETAPSYSPDGSQIVFESDRSGGQQLYIMPAGGGEPRRI 338

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           S +    Y  PVWSP+GDLIAFTK    +F IGVM+ DGS+ERLL      + PTW+P+G
Sbjct: 339 S-NGAGRYGTPVWSPRGDLIAFTKQHQGRFHIGVMRTDGSEERLLTASFLDEGPTWAPNG 397

Query: 402 RSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
           R L+F+R+  G  G   LYS+D++GRN   +     ASDP W
Sbjct: 398 RVLMFTREGAGAGGQPALYSVDISGRNLKKVPLSVPASDPAW 439


>gi|56697941|ref|YP_168312.1| translocation protein TolB [Ruegeria pomeroyi DSS-3]
 gi|67461891|sp|Q5LNU4|TOLB_SILPO RecName: Full=Protein tolB; Flags: Precursor
 gi|56679678|gb|AAV96344.1| TolB, putative [Ruegeria pomeroyi DSS-3]
          Length = 439

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 159/379 (41%), Positives = 235/379 (62%), Gaps = 10/379 (2%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V++ DL  S +F  I   ++  ++T+ D+  +F DW ++ AQ L+TG V   G +RL V 
Sbjct: 62  VLAADLTGSGLFREIPSTAYISQVTSFDAPVQFADWKAINAQALITGAVSVSG-NRLTVR 120

Query: 128 FRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           FRLWDV    ++  G +F  +   WR+++H ++D +Y  ITGE G F+SR+ FVSES   
Sbjct: 121 FRLWDVFAGAELGSGLQFAGTTDGWRRMSHKVADAVYSRITGESGYFDSRVAFVSESGPK 180

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L +MD DGAN++YLT S   I+  PRFSP   +V Y +Y      R++++D  +
Sbjct: 181 DQRRKRLAIMDYDGANVQYLTDS-SSIVLAPRFSPTGDRVLYTSYQG-GFPRIHILD--V 236

Query: 247 DRAPKRIGNFR--SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +  +R+   +  +M  APRFS +G+  L S+ +    D+Y++++ S  + RLT+   I 
Sbjct: 237 GQVQQRVLQSQDGTMSFAPRFSPDGQTVLFSLAQGGNTDLYAMNIASGQSTRLTSAPSIE 296

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + SY+PD S+IVFESDR G  QLYVM + G +  RIS   +  Y  PVWSP+GDLIAFT
Sbjct: 297 TAPSYAPDGSRIVFESDRSGTPQLYVMSAAGGEATRISF-GQGRYGTPVWSPRGDLIAFT 355

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDL 423
           K S  +F IGVM+ DGS+ERLL      + PTWSP+GR ++F+R+  G +G + LYS+D+
Sbjct: 356 KQSKGRFHIGVMRADGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGASGRAALYSVDI 415

Query: 424 NGRNETLINTPAYASDPQW 442
           +GRN   + TP   SDP W
Sbjct: 416 SGRNLRPVRTPDGGSDPSW 434


>gi|114798605|ref|YP_758888.1| tolB protein [Hyphomonas neptunium ATCC 15444]
 gi|114738779|gb|ABI76904.1| tolB protein [Hyphomonas neptunium ATCC 15444]
          Length = 451

 Score =  293 bits (749), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 165/443 (37%), Positives = 252/443 (56%), Gaps = 22/443 (4%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID---ELGGKVSEVVSKDL 73
           L ++++ +G   P S    V+V  +  N+ P  IA   F       E+  +++EVV  DL
Sbjct: 9   LAVIMLAVGLVAPASAQLQVRV--DEGNFKPTPIAIPDFQVTGANTEIARQITEVVRADL 66

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
             + +F++ +  SF Q+  + ++ PRF DW  +    LV G   +    +L V FRLWDV
Sbjct: 67  ASTGLFDMQNPASFIQRDLSINAEPRFADWKIIRTDALVVGAFEELPDGKLAVSFRLWDV 126

Query: 134 KDRKQI-----IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
              + +      G++  ++P +WR+IAH I+D IY  +TGE   F++RI++++E+     
Sbjct: 127 YGGELMRINGEPGRRLTTTPENWRRIAHKIADSIYTRLTGEDPYFDTRIVYIAETGPKTE 186

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L +MD DGAN +YLT  R  +L  PRFSP+ Q++ Y +++     RVYL +    R
Sbjct: 187 RVKRLAIMDSDGANQQYLTSGRSTVL-TPRFSPSSQEITYMSFEGGRP-RVYLFNIETGR 244

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             + +GNF  M  APRF ++G+  L+S  +    D+Y ++L++  + RLT+   I+ S S
Sbjct: 245 Q-ELLGNFPGMTFAPRFGTDGQSVLLSQAQRGNTDVYIMNLRTRESRRLTDHPAIDTSPS 303

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---------YFDPVWSPQGD 359
            SPD   +VF SDR G  QLY+M ++GS +   S  ++ +         Y  PVWSP+GD
Sbjct: 304 MSPDGKSVVFNSDRGGTPQLYIMNTDGSPRACASGGRDTACRITFGRGRYSTPVWSPRGD 363

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           LIAFTK  G KF IGV+  DG  ERLL E    + P WSP+GR ++F R+     G++L+
Sbjct: 364 LIAFTKQEGGKFYIGVIGTDGKGERLLSESYLDEGPDWSPNGRVIVFFRENRPGAGAQLW 423

Query: 420 SIDLNGRNETLINTPAYASDPQW 442
           S+DL+GRNE  + T   ASDP W
Sbjct: 424 SVDLSGRNERRVMTQTDASDPAW 446


>gi|269959053|ref|YP_003328842.1| translocation protein [Anaplasma centrale str. Israel]
 gi|269848884|gb|ACZ49528.1| translocation protein [Anaplasma centrale str. Israel]
          Length = 441

 Score =  292 bits (747), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 157/388 (40%), Positives = 232/388 (59%), Gaps = 12/388 (3%)

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
           E+G     VV  DL  + +F+   +       T P+ +P    W S+G  VLVTG + + 
Sbjct: 55  EVGKSCVRVVLHDLNSTGIFDASWKLPAGGFGTTPEGMPDSDAWTSVGRDVLVTGSIKEF 114

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
            +DR++V   +WDV   +Q+ GK F  +  +WR+ AH++SD IY  ITGE G FN+RI +
Sbjct: 115 SQDRVKVRLFIWDVASGRQLSGKSFNFAVGNWRRAAHSMSDSIYSRITGEGGYFNTRIAY 174

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILR 238
           V+E+ + G     + +MD+DGAN  Y+T S  + +  PRFSP+ + + Y +Y      + 
Sbjct: 175 VAETGLPG--SRRIAIMDQDGANNVYIT-STGEFVSTPRFSPDARSLVYMSYAKSSGSIV 231

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++ ++T    A   +G  R +  +PRFS +GK  L+S     A +IYS+DL+S  + RLT
Sbjct: 232 LHDLETGYSTA---LGGVRGVNSSPRFSPDGKHVLLSESAQGATNIYSIDLKSGKSTRLT 288

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           N   IN SASYSPD   IVF SDR G+ QLYVM ++G++Q+RIS  K   Y  PVWSP+G
Sbjct: 289 NNKSINTSASYSPDKKSIVFNSDRSGRPQLYVMNADGTNQRRISSGK-GGYSAPVWSPRG 347

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG--- 415
           D IAFTK  G+ F IGVMK DGS ERLL +   + +P+WSP+GR ++F+++         
Sbjct: 348 DWIAFTKADGKNFHIGVMKPDGSGERLLAKGHMVDSPSWSPNGRVILFTQQDPPSATHPF 407

Query: 416 -SKLYSIDLNGRNETLINTPAYASDPQW 442
            S+L ++D+ G N   ++ P  AS+  W
Sbjct: 408 RSRLVTVDITGTNTQTLDVPTNASNAHW 435


>gi|254454187|ref|ZP_05067624.1| Tol-Pal system beta propeller repeat protein TolB [Octadecabacter
           antarcticus 238]
 gi|198268593|gb|EDY92863.1| Tol-Pal system beta propeller repeat protein TolB [Octadecabacter
           antarcticus 238]
          Length = 441

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 156/386 (40%), Positives = 229/386 (59%), Gaps = 6/386 (1%)

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
           + +   +S V+++DL  + +F  I   +F     +  S   F DW ++ AQ LVTG V  
Sbjct: 55  EGMAADISRVITEDLNGTGLFRQIPASAFISTPASFGSAIAFPDWRAINAQALVTGAVAV 114

Query: 119 EGKDRLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            G +++ V+FRL+DV    ++  G +F  +   WR++AH +SD +Y  ITGE G F+SR+
Sbjct: 115 NG-NQVTVKFRLYDVFSGGEMGEGLQFAGTTDGWRRMAHKVSDAVYSRITGEAGYFDSRV 173

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           ++V+E+         L +MD DGAN++YLT S   I+  PRFSP+  ++ Y +Y+     
Sbjct: 174 VYVAETGPKDDRAKRLAIMDYDGANVQYLTDS-SAIVLAPRFSPSGDRILYTSYE-SGFP 231

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ ++D       +       M  +PRFS +G++ + S+      DIY  DL +    RL
Sbjct: 232 RINILDVATVVRQQMTTAAGEMAFSPRFSRDGRQVIYSLANGGNTDIYRTDLATGQNTRL 291

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TNT  I  S S+SPD SQIVFESDR G +QLYVM +NG + +RIS +    Y  PVWSP+
Sbjct: 292 TNTPAIETSPSFSPDGSQIVFESDRSGTQQLYVMSANGGEPQRISFEN-GRYGTPVWSPR 350

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           GDLIAFTK    +F IGVM+ DG++ERLL      + PTW+P+GR ++F+R+  G  G+ 
Sbjct: 351 GDLIAFTKQESGRFHIGVMRTDGTEERLLTSSFLDEGPTWAPNGRVIMFARETQGSDGTT 410

Query: 418 -LYSIDLNGRNETLINTPAYASDPQW 442
            LYS+D+ GRN   + TP   SDP W
Sbjct: 411 GLYSVDITGRNLRRVTTPQGGSDPSW 436


>gi|84687705|ref|ZP_01015578.1| translocation protein TolB precursor [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84664288|gb|EAQ10779.1| translocation protein TolB precursor [Rhodobacterales bacterium
           HTCC2654]
          Length = 444

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 169/452 (37%), Positives = 262/452 (57%), Gaps = 38/452 (8%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV----------------S 57
           K+NL + LVL+      ++       T +A   P+ I  T+ V                S
Sbjct: 3   KLNLLVALVLM------TLAPVFSATTATAQQGPLRIEITEGVIEPLPFAVPTFQAETGS 56

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
              +  ++S V++ DL  + +F  I   +F   +TN  S  ++ DW ++ AQ L+TG V 
Sbjct: 57  AGAIAEEISRVIAADLSGTGLFREIPSSAFIANVTNFASPIQYADWKAVNAQALITGAVS 116

Query: 118 KEGKDRLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
           ++G  ++ V+FR++DV    ++  G ++  +    R+IAH ++D +Y  ITGE G F+SR
Sbjct: 117 EQG-GQINVKFRVYDVFSGTELGQGLQYTGTTDGVRRIAHKVADTVYSRITGETGYFDSR 175

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           ++FVSES      +  L VMD DGAN++YLT S + +L  PRFS +  +V Y +Y+    
Sbjct: 176 VVFVSESGPKNARRKQLAVMDYDGANVKYLTDS-ESLLLAPRFSKSGDRVLYTSYETGQP 234

Query: 237 LRVYLMDTRIDRAPKRI-----GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            ++Y+++  +  A +R      GN   M  +PRFS +G   + S+++    +IY +DL  
Sbjct: 235 -QIYVLE--VGSAQRRALGTGGGN---MAFSPRFSPDGNGLIFSLEQGGNSEIYRMDLNG 288

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               +LTN+  I+ + S+SPD S+IVFESDR G +Q+YVM +NG + +RIS      Y  
Sbjct: 289 GGLVQLTNSPAIDTAPSFSPDGSRIVFESDRSGTQQIYVMSANGGEPQRISFGP-GRYGT 347

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           PVWSP+GDLIAFTK +  +F IGVM+ DGS+ERLL      + PTW+P+GR ++F+R+  
Sbjct: 348 PVWSPRGDLIAFTKQNAGRFHIGVMRTDGSEERLLTASFLDEGPTWAPNGRVIMFTRESQ 407

Query: 412 GDTGSK-LYSIDLNGRNETLINTPAYASDPQW 442
           G  G+  LYS+D++GRN   + TP  ASDP W
Sbjct: 408 GAEGAPGLYSVDISGRNLRRVPTPDAASDPSW 439


>gi|83943918|ref|ZP_00956375.1| translocation protein TolB precursor [Sulfitobacter sp. EE-36]
 gi|83954491|ref|ZP_00963202.1| translocation protein TolB precursor [Sulfitobacter sp. NAS-14.1]
 gi|83840775|gb|EAP79946.1| translocation protein TolB precursor [Sulfitobacter sp. NAS-14.1]
 gi|83845165|gb|EAP83045.1| translocation protein TolB precursor [Sulfitobacter sp. EE-36]
          Length = 440

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 168/436 (38%), Positives = 253/436 (58%), Gaps = 16/436 (3%)

Query: 17  LCLLLVLIGGF--FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK----VSEVVS 70
           L L L LIGG      +    +++        P+  A   F       G+    ++ VVS
Sbjct: 6   LSLCLALIGGVASVAQAQDGPLRIEITEGVIEPLPFAVPSFQPESGDAGQMAVDLARVVS 65

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
           +DL  S +F  +   ++   +++ ++  ++ DW ++ AQ L+TG V   G + L V+FRL
Sbjct: 66  EDLVGSGLFREVPASAYISTVSDFNAPIQYADWKAINAQALITGAVSVSG-NTLNVKFRL 124

Query: 131 WDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           +DV    ++  G +F  +   WR++AH ++D +Y  ITGE G F+SR+++VSE+      
Sbjct: 125 YDVFSGAELGSGLQFSGTVDGWRRMAHKVADAVYSRITGEGGYFDSRVVYVSETGPKDDR 184

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L VMD DGAN+RYLT S   I+  PRFSP+  ++ Y +Y+     R+Y++D  I   
Sbjct: 185 AKRLAVMDYDGANVRYLTDS-SSIVLAPRFSPSGDRILYTSYE-SGFPRIYVLD--IGSV 240

Query: 250 PKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            +R+      +M  APRFS +G   + S+ +    DIY++D+ +  + RLTNT  I  + 
Sbjct: 241 QRRVLESAEGTMSFAPRFSPSGNTVVYSLTQGGNTDIYTMDINTGQSTRLTNTPAIETAP 300

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SYSPD S+IVFESDR G +QLY+M + G +  RIS   E  Y  PVWSP+GDL+AFTK +
Sbjct: 301 SYSPDGSRIVFESDRSGSQQLYIMPATGGEATRISF-GEGRYGTPVWSPRGDLVAFTKQN 359

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGR 426
             +F IGVM+ DGS+ERLL      + PTW+P+GR ++F+R+  G  G S LYS+D++GR
Sbjct: 360 KGRFHIGVMRLDGSEERLLTASFLDEGPTWAPNGRVIMFARETQGAGGASSLYSVDISGR 419

Query: 427 NETLINTPAYASDPQW 442
           N   + T    SDP W
Sbjct: 420 NLKPVRTQEGGSDPSW 435


>gi|89068040|ref|ZP_01155457.1| translocation protein TolB precursor [Oceanicola granulosus
           HTCC2516]
 gi|89046279|gb|EAR52336.1| translocation protein TolB precursor [Oceanicola granulosus
           HTCC2516]
          Length = 446

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 159/416 (38%), Positives = 243/416 (58%), Gaps = 16/416 (3%)

Query: 36  VKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
           +++     N  P+  A   F       + L   +S +V++DL  + +F  I   +F  ++
Sbjct: 33  LRITVTDPNVEPLPFAIPAFEAETAGAEGLASDISRLVAQDLVNTGLFREIPSTAFVSQL 92

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPAS 150
           T+      + DW ++ AQ L+TG V   G  ++ V+FRL+DV   +++  G++   +   
Sbjct: 93  TSFAQPVAYTDWRTINAQALITGAVAVNGG-QVTVKFRLYDVFSGQELGAGQQLVGTTDG 151

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           WR++AH ++D +Y  ITGE G F+SR++FVSE+      +  L +MD DGAN++YLT S 
Sbjct: 152 WRRMAHKVADQVYSRITGESGYFDSRVVFVSETGPKNDRRKRLAIMDYDGANVQYLTDS- 210

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI---DRAPKRIGNFRSMILAPRFSS 267
             I+  PRFSP   +V Y ++D     R+  +D       + P + G    M  +PRFS 
Sbjct: 211 GSIVLAPRFSPTGDRVIYTSWD-SGFPRINAIDVGTVSRQQIPVQAGE---MAFSPRFSR 266

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G++ + S+ +   +DI+  D+ +   +RLT+   I  + S SPD  +IVFESDR G +Q
Sbjct: 267 DGRQVIYSLSEGGNIDIWRTDITTGQHQRLTSAPSIETAPSLSPDGQRIVFESDRSGSQQ 326

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           LYVM   G + +RIS   E  Y  PVWSP+GD+IAFTK    +F IGVM+ DGS+ERLL 
Sbjct: 327 LYVMPVTGGEPQRISF-GEGRYGSPVWSPRGDMIAFTKQHAGRFHIGVMRTDGSEERLLT 385

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTPAYASDPQW 442
                + PTWSP+GR L+FSR+  G  G+  +YS+D++GRN   + TPA+ASDP W
Sbjct: 386 ASFLDEGPTWSPNGRVLMFSRETQGADGAPAIYSVDVSGRNLRRVTTPAFASDPSW 441


>gi|255262012|ref|ZP_05341354.1| Tol-Pal system beta propeller repeat protein TolB [Thalassiobium
           sp. R2A62]
 gi|255104347|gb|EET47021.1| Tol-Pal system beta propeller repeat protein TolB [Thalassiobium
           sp. R2A62]
          Length = 441

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 156/388 (40%), Positives = 235/388 (60%), Gaps = 6/388 (1%)

Query: 57  SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV 116
           S  ++   +S V+++DL  + +F  I   +F  +I+   +  +F DW ++  Q LVTG V
Sbjct: 53  SAAQVAADLSRVIAEDLTGTGLFRQILASAFISQISAFSAPIQFADWRAINTQALVTG-V 111

Query: 117 IKEGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           +    D+L V+FRL+DV    ++  G++   + + WR++AH +SD +Y  ITGE G F+S
Sbjct: 112 VSVNGDQLTVKFRLYDVFSGAELGAGQQLAGTVSGWRRMAHKVSDQVYSRITGEGGYFDS 171

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R++FVSE+      +  L +MD DGAN+++LT S   I+  PRFSPN  +V Y +Y+   
Sbjct: 172 RVVFVSETGPKNDRRKRLAIMDYDGANVQFLTDSAS-IVLAPRFSPNGDRVLYTSYE-TG 229

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             R+ ++D       +       M  +PRFS +G++ + S+      DIY  DL S +  
Sbjct: 230 FPRINILDVASVGRQQLATADGEMAFSPRFSRDGRQVIYSIANGGNTDIYRSDLASGSNA 289

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           RLT+   I  + S+SPD SQIVFESDR G +QLY+M ++G + +RIS   +  Y  PVWS
Sbjct: 290 RLTSAPSIETAPSFSPDGSQIVFESDRSGTQQLYIMSASGGEPRRISF-GDGRYGTPVWS 348

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P+GDL+AFTK +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++F+R+  G  G
Sbjct: 349 PRGDLVAFTKQNAGRFHIGVMRTDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGADG 408

Query: 416 S-KLYSIDLNGRNETLINTPAYASDPQW 442
           +  LYS+D+ GRN   + T   ASDP W
Sbjct: 409 APALYSVDITGRNLKRVTTSNAASDPSW 436


>gi|254486268|ref|ZP_05099473.1| Tol-Pal system beta propeller repeat protein TolB [Roseobacter sp.
           GAI101]
 gi|214043137|gb|EEB83775.1| Tol-Pal system beta propeller repeat protein TolB [Roseobacter sp.
           GAI101]
          Length = 430

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 159/382 (41%), Positives = 239/382 (62%), Gaps = 10/382 (2%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           ++ VVS+DL  S +F  I   +F   +++ ++  ++ DW ++ AQ L+TG V   G + L
Sbjct: 50  LARVVSEDLVGSGLFREIPASAFISTVSDFNAPVQYADWKAINAQALITGAVNVSG-NTL 108

Query: 125 RVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            V+FRL+DV    ++  G +F  +   WR++AH ++D +Y  ITGE G F+SR+++VSE+
Sbjct: 109 SVKFRLYDVFSGAELGSGLQFQGTVDGWRRMAHKVADAVYSRITGEGGYFDSRVVYVSET 168

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                 +  L VMD DGAN+RYLT S   I+  PRFSP   ++ Y +Y+     R+Y++D
Sbjct: 169 GPKDGRQKRLAVMDYDGANVRYLTDS-TSIVLAPRFSPTGDRILYTSYE-SGFPRIYVLD 226

Query: 244 TRIDRAPKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             I    +R+      +M  APRFS +G+  + S+ +    DIY++D+ +  + RLTNT 
Sbjct: 227 --IGSVQRRVLESADGTMSFAPRFSPSGQTVVYSLTQGGNTDIYTMDINTGQSVRLTNTP 284

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I  + SYSPD S+IVFESDR G +QLY+M ++G + +RIS   E  Y  PVWSP+GDL+
Sbjct: 285 AIETAPSYSPDGSRIVFESDRSGTQQLYIMPASGGEAQRISF-GEGRYGTPVWSPRGDLV 343

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYS 420
           AFTK +  +F IGVM+ DGS+ERLL      + PTW+P+GR ++F+R+  G  G S LYS
Sbjct: 344 AFTKQNKGRFHIGVMRLDGSEERLLTASFLDEGPTWAPNGRVIMFARETQGAGGSSSLYS 403

Query: 421 IDLNGRNETLINTPAYASDPQW 442
           +D++GRN   + T    SDP W
Sbjct: 404 VDISGRNLKPVRTQEGGSDPSW 425


>gi|259417642|ref|ZP_05741561.1| Tol-Pal system beta propeller repeat protein TolB [Silicibacter sp.
           TrichCH4B]
 gi|259346548|gb|EEW58362.1| Tol-Pal system beta propeller repeat protein TolB [Silicibacter sp.
           TrichCH4B]
          Length = 441

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 162/403 (40%), Positives = 242/403 (60%), Gaps = 12/403 (2%)

Query: 47  PVSIAFTKFVS----IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P+  A   F++      +    ++ V+++DL  S +F  I + ++    T+ D+   F D
Sbjct: 39  PLPFAVPDFIAESPAAAQYSADIARVIAEDLVGSGLFREIPKVAYISPYTDFDAAVNFTD 98

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDD 161
           W ++ AQ L+TG V   G +R+ V FR +DV   +++  G +   +   WR+I H ++D 
Sbjct: 99  WKAINAQALITGSVSLSG-NRITVRFRAYDVFAGQELGSGLQLSGTTDGWRRIGHKVADT 157

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           IY  +TGE G F+SR++FVSE+      K  L +MD DGAN++YLT S + I+  PRFSP
Sbjct: 158 IYSRLTGESGYFDSRVVFVSETGPKDDRKKRLAIMDYDGANVQYLTNS-ESIVLAPRFSP 216

Query: 222 NQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              +V Y +Y+     +++++D  R+ R     GN  SM  APRF+ NG   + S     
Sbjct: 217 TGDRVLYTSYE-SGFPQIHVLDVGRVQRRILSAGN-GSMSFAPRFAPNGHTIVYSQSAGG 274

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D++S+D+ S   +RLT+   I  + S+SPD SQ+VFESDR G  QLYVM  +G + KR
Sbjct: 275 NTDLFSMDINSGNPQRLTSAPSIETAPSFSPDGSQLVFESDRSGTSQLYVMPVSGGEAKR 334

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           IS   +  Y  PVWSP+GD IAFTK +  +F IGVM+ DGS+ERLL      + PTWSP+
Sbjct: 335 ISF-GQGRYGTPVWSPRGDYIAFTKQNAGRFHIGVMRTDGSEERLLTASFLDEGPTWSPN 393

Query: 401 GRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
           GR ++F+R+  G +G ++LYS+D++GRN   + TP  ASDP W
Sbjct: 394 GRVIMFTRETQGASGQARLYSVDISGRNLKPVKTPDGASDPSW 436


>gi|163745825|ref|ZP_02153184.1| translocation protein TolB precursor [Oceanibulbus indolifex
           HEL-45]
 gi|161380570|gb|EDQ04980.1| translocation protein TolB precursor [Oceanibulbus indolifex
           HEL-45]
          Length = 448

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 163/426 (38%), Positives = 248/426 (58%), Gaps = 16/426 (3%)

Query: 29  PTSIHA-FVKVATNSANYSPVSIAFTKFVSIDELGGK----VSEVVSKDLQRSDVFNLIS 83
           P   HA  +++  +     P+  A   F       G+    ++ VVS+DL  + +F  I 
Sbjct: 22  PNQSHAQPLRIVIDDPTIEPLPFAVPSFQPESGEAGQMAVDLARVVSEDLTGTGLFREIP 81

Query: 84  QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII--- 140
             ++   +++ ++   + DW ++ AQ L+TG V   G + + V+FR++DV   ++++   
Sbjct: 82  ASAYISTVSDFNAPVEYADWKAINAQALITGAVNVSG-NSVNVKFRVYDVFSGEELLDGR 140

Query: 141 ---GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
              G +F  +   WR++AH ++D +Y  ITGE G F+SR+++VSE+      +  L VMD
Sbjct: 141 GQGGLQFTGTVDGWRRMAHKVADAVYSRITGEGGYFDSRVVYVSETGPKDARQKRLAVMD 200

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DGAN++YLT S   I+  PRFSP   +V Y +Y+     R+Y++D    +         
Sbjct: 201 YDGANLKYLTES-GSIVLAPRFSPTGDRVLYTSYE-SGFPRIYVLDIGTVQRRALQSAEG 258

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           SM  APRFS +G+  + S+ +    DI+S+D+ S  + RLTNT  I  + S+SPD S+IV
Sbjct: 259 SMAFAPRFSPSGQTVVYSLSQGGNTDIFSMDINSGQSVRLTNTPAIETAPSFSPDGSRIV 318

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           FESDR G  QLYVM + G +  RIS   E  Y  PVWSP+GDL+AFTK +  +F IGVM+
Sbjct: 319 FESDRSGSPQLYVMPATGGEATRISF-GEGRYGTPVWSPRGDLVAFTKQNKGRFHIGVMR 377

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAY 436
            DGS+ERLL      + PTW+P+GR ++F+R+  G  G S LYS+D++GRN   + TP  
Sbjct: 378 LDGSEERLLTASFLDEGPTWAPNGRVIMFARETQGAGGSSSLYSVDISGRNLKPVRTPEG 437

Query: 437 ASDPQW 442
            SDP W
Sbjct: 438 GSDPSW 443


>gi|15604171|ref|NP_220686.1| translocation protein TolB [Rickettsia prowazekii str. Madrid E]
 gi|6647892|sp|Q9ZDM5|TOLB_RICPR RecName: Full=Protein tolB; Flags: Precursor
 gi|3860863|emb|CAA14763.1| TOLB PROTEIN PRECURSOR (tolB) [Rickettsia prowazekii]
 gi|292571902|gb|ADE29817.1| TolB protein precursor [Rickettsia prowazekii Rp22]
          Length = 443

 Score =  289 bits (739), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 173/444 (38%), Positives = 250/444 (56%), Gaps = 20/444 (4%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQR 75
           ++  I   F  + +A   +        P  IA  KF     + D +G  V +V+S DL+ 
Sbjct: 4   IVYFILTLFSLTSYALETINIEHGRVDPTPIAVNKFNADSSNNDLVGRDVVKVISNDLKI 63

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F  IS  SF ++ T     P F  W  + A +LV G V      +L++ F LWD   
Sbjct: 64  SGLFRPISSASFIEEQTGIKYKPLFAAWRQINASLLVNGEVKTLENGKLKISFILWDTFL 123

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            KQ+ G  F      WR+ AH I+D IY+ ITG+ G F+++I++VSES V   IK  + +
Sbjct: 124 EKQLTGALFEVPTKLWRRAAHKIADKIYEKITGDPGYFDTKIVYVSESTVLPKIKR-IAL 182

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD DGAN +YLT  +  +L  PRF+ +  K+ Y +Y  +    VY  D +  +    +G+
Sbjct: 183 MDYDGANNKYLTNGKSLVL-TPRFAHSADKIFYVSYATKSRALVYEKDLKTGKE-SVVGD 240

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F  +  APRFS +GK+A++S+ K+ +  IY +DL +    +LTN   IN S SYSPD  +
Sbjct: 241 FVGISFAPRFSPDGKKAVMSIAKNGSTHIYEIDLATKQLNKLTNGFGINTSPSYSPDGKK 300

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---SGEK-F 371
           IVF SD+ G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK     GEK F
Sbjct: 301 IVFNSDKNGVPQLYIMNSDGSDVQRISFG-VGSYASPSWSPRGDYIAFTKIIRQDGEKTF 359

Query: 372 AIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDL 423
            IG+MK      G+ ER++     + +P WSP+GR ++FS+    K +    +K+++IDL
Sbjct: 360 NIGIMKAYPQDHGNSERIITSGYLVDSPCWSPNGRVIMFSKGWPSKANAPGKNKIFTIDL 419

Query: 424 NGRNETLINTPAYASDPQWVGFMD 447
            G NE  I TPA ASDP+W G ++
Sbjct: 420 TGHNEREIITPADASDPEWSGILN 443


>gi|86139146|ref|ZP_01057716.1| translocation protein TolB precursor [Roseobacter sp. MED193]
 gi|85823990|gb|EAQ44195.1| translocation protein TolB precursor [Roseobacter sp. MED193]
          Length = 446

 Score =  288 bits (738), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 165/406 (40%), Positives = 238/406 (58%), Gaps = 18/406 (4%)

Query: 47  PVSIAFTKFVS----IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P+  A   F++      EL  +++ V++ DL  + +F  I   +    +++ ++  RF D
Sbjct: 44  PLPYAVPSFLAETPAAAELANQITRVIAADLSGTGLFREIPATAHISTVSDFNAPVRFAD 103

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV-KDRKQIIGKKFFSSPASWRKIAHTISDD 161
           W ++ AQ L+TG V   GK +L V FR +DV  D +   G +F  +   WR++AH ++D 
Sbjct: 104 WKAVNAQALITGSVSVNGK-QLTVRFRGYDVFADNELGAGLQFSGTTDGWRRMAHKVADA 162

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           IY  ITGE G F+SR++FVSE+      +  L +MD DGA ++YLT S   ++  PRFSP
Sbjct: 163 IYSRITGESGYFDSRVVFVSETGPKNDRRKRLAIMDYDGAGVQYLTNS-SALVLAPRFSP 221

Query: 222 NQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              +V Y +Y+       +L V  +  R+  A K I     M  APRF+ +G   + S  
Sbjct: 222 TGDRVLYTSYESGFPQIHVLDVGKVQRRVLSADKGI-----MSFAPRFAPDGNTVVYSQA 276

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +    D+Y++D+ + A +RLT    I  + SYSPD SQIVFESDR G  QLYVM + G +
Sbjct: 277 EGGNTDLYTMDIATGARQRLTRAPSIETAPSYSPDGSQIVFESDRSGTPQLYVMPATGGE 336

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +RIS  K   Y  PVWSP+GDLIAFTK S  +F IGVM+ DGS+ERLL      + P+W
Sbjct: 337 ARRISFGK-GRYGTPVWSPRGDLIAFTKQSKGRFHIGVMRLDGSEERLLTASFLDEGPSW 395

Query: 398 SPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
           SP+GR ++F+R+  G  G + LYS+D+ GRN   + TP  ASDP W
Sbjct: 396 SPNGRVIMFTRETQGANGRALLYSVDILGRNLKPVRTPDGASDPAW 441


>gi|163738349|ref|ZP_02145764.1| TolB-like protein [Phaeobacter gallaeciensis BS107]
 gi|161388270|gb|EDQ12624.1| putative protein tolB [Phaeobacter gallaeciensis BS107]
          Length = 446

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 170/450 (37%), Positives = 253/450 (56%), Gaps = 19/450 (4%)

Query: 3   LRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV----SI 58
           +R ++A  L M   L    V+       +    +++        P+  A   FV    + 
Sbjct: 1   MRTYLAT-LVMGATLLGAAVMTSALPAQAQDGPLRIEITDGVIEPLPYAVPGFVPETPAA 59

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
            EL   +S V++ DL  + +F  +   +   K+T+ D+   + DW ++ AQ L+TG +  
Sbjct: 60  AELARDISRVIAADLSGTGLFREVPASAHISKVTDFDAAVSYADWKAVNAQALITGALSV 119

Query: 119 EGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            G +RL V FR  DV   K++  G +F  +   WR++AH ++D IY  ITGE G F+SR+
Sbjct: 120 NG-NRLTVRFRGHDVFAEKELGTGLQFSGTTDGWRRMAHKVADVIYSRITGESGYFDSRV 178

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--- 234
           +FVSES      +  L +MD DGAN++YLT S   I+  PRFSP   +V Y +Y+     
Sbjct: 179 VFVSESGPKNDRRKRLAIMDYDGANVQYLTNSA-SIVLAPRFSPTGDRVLYTSYESGFPQ 237

Query: 235 -DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
             +L V  +  R+  A   I     M  APRF+ +G+  + S  +    DI+++++ + A
Sbjct: 238 IHVLDVGSVQRRVLSADNGI-----MSFAPRFAPDGRTVVYSQSQGGNTDIFTMNIDTGA 292

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             RLT+   I  + S+SPD SQIVFESDR G  QLYVM + G + +RIS      Y  PV
Sbjct: 293 RTRLTSAPSIETAPSFSPDGSQIVFESDRSGAPQLYVMAATGGEARRISFGA-GRYGTPV 351

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           WSP+GD+IAFTK +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++F+R+  G 
Sbjct: 352 WSPRGDMIAFTKQNKGRFHIGVMRTDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGA 411

Query: 414 TG-SKLYSIDLNGRNETLINTPAYASDPQW 442
           +G + LYS+D++GRN   + TP  ASDP W
Sbjct: 412 SGRALLYSVDVSGRNLKPVRTPDGASDPAW 441


>gi|126737227|ref|ZP_01752962.1| translocation protein TolB precursor [Roseobacter sp. SK209-2-6]
 gi|126721812|gb|EBA18515.1| translocation protein TolB precursor [Roseobacter sp. SK209-2-6]
          Length = 445

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 154/383 (40%), Positives = 240/383 (62%), Gaps = 10/383 (2%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           +++ VV+ DL  + +F  +   +   K+++ ++  RF DW ++ AQ L+TG V  +G ++
Sbjct: 64  EITRVVASDLSGTGLFREVPASAHISKVSDFNAPVRFADWKAVNAQALITGSVSAQG-NQ 122

Query: 124 LRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           L V FR +DV   K++  G +F  +   WR++AH ++D IY  ITGE G F+SR+++VSE
Sbjct: 123 LTVRFRGYDVFAEKELGSGLQFNGTKEGWRRMAHKVADAIYSRITGESGYFDSRVVYVSE 182

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +      +  L +MD DGAN++YLT S   ++  PRFSP   +V Y +Y+     +++++
Sbjct: 183 TGPKNDRRKRLAIMDYDGANVQYLTDS-SALVLAPRFSPTGDRVLYTSYE-SGFPQIHVL 240

Query: 243 DTRIDRAPKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           D  + R  +R+   +   M  APRF+ +G+  + S       D++++D+ + + +RLT+ 
Sbjct: 241 D--VGRVQRRVLSADQGIMTFAPRFAPDGRTVVYSQTAGGNTDLFTMDIANGSRKRLTSA 298

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I  + S+SPD SQIVFESDR G +QLYVM ++G + +RIS  K   Y  PVWSP+GDL
Sbjct: 299 PSIETAPSFSPDGSQIVFESDRSGSQQLYVMPASGGEARRISFGK-GRYGTPVWSPRGDL 357

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLY 419
           IAFTK S  +F IGVM+ DGS+ERLL      + P+WSP+GR ++F+R+  G  G + LY
Sbjct: 358 IAFTKQSKGRFHIGVMRTDGSEERLLTASFLDEGPSWSPNGRVIMFTRETQGANGRALLY 417

Query: 420 SIDLNGRNETLINTPAYASDPQW 442
           S+D+ GRN   + TP  ASDP W
Sbjct: 418 SVDILGRNLKPVRTPDGASDPAW 440


>gi|163742234|ref|ZP_02149622.1| translocation protein TolB precursor [Phaeobacter gallaeciensis
           2.10]
 gi|161384564|gb|EDQ08945.1| translocation protein TolB precursor [Phaeobacter gallaeciensis
           2.10]
          Length = 446

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 169/450 (37%), Positives = 253/450 (56%), Gaps = 19/450 (4%)

Query: 3   LRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV----SI 58
           +R ++A  L M   L    V+       +    +++        P+  A   FV    + 
Sbjct: 1   MRTYLAT-LVMGATLLGAAVMTSALPAQAQDGPLRIEITDGVIEPLPYAVPGFVPETPAA 59

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
            EL   +S V++ DL  + +F  +   +   K+T+ D+   + DW ++ AQ L+TG +  
Sbjct: 60  AELARDISRVIAADLSGTGLFREVPASAHISKVTDFDAAVSYADWKAVNAQALITGALSV 119

Query: 119 EGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            G +RL V FR  DV   K++  G +F  +   WR++AH ++D IY  ITGE G F+SR+
Sbjct: 120 NG-NRLTVRFRGHDVFAEKELGTGLQFSGTTDGWRRMAHKVADVIYSRITGESGYFDSRV 178

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--- 234
           +FVSES      +  L +MD DGAN++YLT S   I+  PRFSP   +V Y +Y+     
Sbjct: 179 VFVSESGPKNDRRKRLAIMDYDGANVQYLTNSA-SIVLAPRFSPTGDRVLYTSYESGFPQ 237

Query: 235 -DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
             +L V  +  R+  A   I     M  APRF+ +G+  + S  +    DI+++++ + A
Sbjct: 238 IHVLDVGSVQRRVLSADNGI-----MSFAPRFAPDGRTVVYSQSQGGNTDIFTMNIDTGA 292

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             RLT+   I  + S+SPD SQIVFESDR G  QLYVM + G + +RIS      Y  PV
Sbjct: 293 RTRLTSAPSIETAPSFSPDGSQIVFESDRSGAPQLYVMAATGGEARRISFGA-GRYGTPV 351

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           WSP+GD++AFTK +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++F+R+  G 
Sbjct: 352 WSPRGDMVAFTKQNKGRFHIGVMRTDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGA 411

Query: 414 TG-SKLYSIDLNGRNETLINTPAYASDPQW 442
           +G + LYS+D++GRN   + TP  ASDP W
Sbjct: 412 SGRALLYSVDVSGRNLKPVRTPDGASDPAW 441


>gi|254441731|ref|ZP_05055224.1| Tol-Pal system beta propeller repeat protein TolB [Octadecabacter
           antarcticus 307]
 gi|198251809|gb|EDY76124.1| Tol-Pal system beta propeller repeat protein TolB [Octadecabacter
           antarcticus 307]
          Length = 441

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 156/387 (40%), Positives = 232/387 (59%), Gaps = 8/387 (2%)

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
           D +   +S V++ DL  + +F  I   +F     +  S   F DW ++ +Q LVTG V  
Sbjct: 55  DGMAADISRVIAADLNGTGLFRQIPSSAFISTPASFGSPIAFADWRAINSQALVTGAVAV 114

Query: 119 EGKDRLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            G +++ V+FRL+DV    ++  G +F  + + WR++AH ++D +Y  ITGE G F+SR+
Sbjct: 115 NG-NQVTVKFRLYDVFSGAEMGEGLQFAGTASGWRRMAHKVADAVYSRITGESGYFDSRV 173

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           ++V+E+      +  + VMD DGAN++YLT S   I+  PRFSP+  ++ Y +Y+     
Sbjct: 174 VYVAETGPKDDREKRIAVMDYDGANVQYLTDS-STIVLAPRFSPSGDRILYTSYE-SGFP 231

Query: 238 RVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           R+ ++D   + R   R  +   M  +PRFS +G++ + S+      DIY  DL +    R
Sbjct: 232 RINILDVATVMRQQMRTAD-GEMAFSPRFSRDGRQVIYSLANGGNTDIYRTDLATGQNMR 290

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LTNT  I  + S+SPD SQIVFESDR G +QLY+M +NG + +RIS      Y  PVWSP
Sbjct: 291 LTNTPAIETAPSFSPDGSQIVFESDRSGTQQLYMMSANGGEPQRISFGN-GRYGTPVWSP 349

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           +GDLIAFTK    +F IGVM+ DG++ERLL      + PTW+P+GR ++FSR+  G  G+
Sbjct: 350 RGDLIAFTKQELGRFHIGVMRTDGTEERLLTSSFLDEGPTWAPNGRVIMFSRETQGSDGT 409

Query: 417 K-LYSIDLNGRNETLINTPAYASDPQW 442
             LYS+D+ GRN   + TP   SDP W
Sbjct: 410 TGLYSVDITGRNLRRVTTPQGGSDPSW 436


>gi|254420878|ref|ZP_05034602.1| Tol-Pal system beta propeller repeat protein TolB [Brevundimonas
           sp. BAL3]
 gi|196187055|gb|EDX82031.1| Tol-Pal system beta propeller repeat protein TolB [Brevundimonas
           sp. BAL3]
          Length = 457

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 169/448 (37%), Positives = 248/448 (55%), Gaps = 21/448 (4%)

Query: 13  MKINLCLLLVLI-----------GGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
           M++NL L    +           G   P      V+V  +     P+ IA   F    + 
Sbjct: 1   MRLNLLLASAAVVAMSVSSAQAQGQTAPAQAGQPVEVEIDQGVLKPLQIAIVPFTG--DH 58

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  +S VVS +L+RS  F  ++   F +      + P F  W  +GAQ ++ G V   G 
Sbjct: 59  GADISNVVSGNLRRSGFFEPLNPAGFIETGLTLANAPNFPQWTQIGAQAVLYGGVTPRGD 118

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL V FRL+D   + Q++  +F ++   WR+IAH ISD IYQ +TGE G F+SR++FVS
Sbjct: 119 GRLDVGFRLYDPYRQCQLVSYQFTATQEQWRRIAHKISDVIYQRMTGETGFFDSRVVFVS 178

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVY 240
           E        N L + D+DG N  YLT   D+I+  PRFS +Q  ++ Y     +D  R+Y
Sbjct: 179 EEGTQLNRINRLTIADQDGFNPTYLTQG-DEIIMSPRFSTSQPDEITYVAL-GKDYSRIY 236

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L +    R  + +G F   +LAPRFS++G +   S+ +    DIY +DL+S    RLT+ 
Sbjct: 237 LRNLTTGRT-ESLGEFDGQVLAPRFSNDGNKIAFSIIRGGNTDIYVMDLRSRQLSRLTSD 295

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+ S S+SPD SQIVF SDR G+ +LYVM+++GS Q+ IS+    +Y  P WSP G+L
Sbjct: 296 PGIDTSPSFSPDGSQIVFNSDRSGQARLYVMRADGSGQRPISRGG-GTYTAPAWSPTGNL 354

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLY 419
           IAFTK  G +F+ GVM  DGS ER+L      + P W+P+GR ++F+R+ + GDT  +L+
Sbjct: 355 IAFTKSGGGRFSTGVMNADGSGERILSSSYFEEGPNWAPNGRYVMFARQTRGGDT--RLW 412

Query: 420 SIDLNGRNETLINTPAYASDPQWVGFMD 447
           ++DL+GR           +DP W   +D
Sbjct: 413 TVDLSGRVVAQAGYNGRGTDPAWSPLLD 440


>gi|83859800|ref|ZP_00953320.1| translocation protein TolB precursor [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852159|gb|EAP90013.1| translocation protein TolB precursor [Oceanicaulis alexandrii
           HTCC2633]
          Length = 448

 Score =  286 bits (733), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 167/445 (37%), Positives = 248/445 (55%), Gaps = 21/445 (4%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSEVVSKD 72
           +  L+V+ G  F       + V        P  IA   F+  D    E+G  +S V+S +
Sbjct: 11  ILALIVMAGSAF---AQTPLVVDVTEGTLDPTPIAIPDFLGADNREAEIGADISRVISNN 67

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           LQ S +F  +  D+F + IT+ +  PRF DW  + A  L+ G V  +  DR+ V FRLWD
Sbjct: 68  LQTSGLFAPVDPDAFIEDITDINLRPRFGDWRVINASALLVGEVTIDENDRMLVAFRLWD 127

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKN 191
               +Q+ G +F +SP +WR+IAH +SD +Y+ +TGE G F++RI++VSE    +G    
Sbjct: 128 ANTEQQLQGLQFVTSPDNWRRIAHKVSDAVYERLTGESGYFDTRIVYVSEGDGPNGEPIR 187

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L VMD+DGAN  +LT  R  +   P +SP+ Q++ Y ++ D      YL D    R   
Sbjct: 188 RLAVMDQDGANPSFLT-DRSYMALLPNYSPSAQQITYVSFRDGRATS-YLYDLETGRQEA 245

Query: 252 RIGNFRSMI-----LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
              +  S+      L+ RF  NG+  ++S ++    D++  DL+S    +LT     ++ 
Sbjct: 246 LFDSGPSLASEGQSLSARFHPNGRELVVSAERHSGHDLFKFDLRSRTLRQLTTHPADDVE 305

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            SY+PD  Q+VF S R G+ QLYVM ++G+D +RI+   E  Y  PVWSP+GDLIAFTK 
Sbjct: 306 PSYAPDGEQVVFSSSRGGQSQLYVMNADGTDPQRITF-GEGRYTTPVWSPRGDLIAFTKQ 364

Query: 367 SGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFS---RKKDGDTGSKLYSID 422
              +F +GV+  DGS +ER+L E   +  P WSP+GR L+F+   R ++G T S ++SID
Sbjct: 365 RSGQFMLGVVAADGSGEERILYEGYFVDTPAWSPNGRVLLFTRGDRTREGTTYS-IWSID 423

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G N   + T   ASDP W   +D
Sbjct: 424 LAGFNLRRLPTQGEASDPAWSPLID 448


>gi|84516652|ref|ZP_01004011.1| translocation protein TolB precursor [Loktanella vestfoldensis
           SKA53]
 gi|84509688|gb|EAQ06146.1| translocation protein TolB precursor [Loktanella vestfoldensis
           SKA53]
          Length = 438

 Score =  286 bits (732), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 168/437 (38%), Positives = 252/437 (57%), Gaps = 12/437 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----IDELGGKVSEV 68
           MK  L LL+ L+      +    +++        P++ A   F +      +L  +++ +
Sbjct: 2   MKRILTLLIALMFAGPAFAQGGPLRLTITDGVIEPITFAVPSFEAETPQAGQLASELTRL 61

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V+++L  + +F  +   +F  ++ +      F DW ++ AQ LV G V   G D++ V+F
Sbjct: 62  VAQNLSGTGLFREVPASAFISQVGSFAQPVAFADWRAVNAQALVIGAVSMTG-DQVNVKF 120

Query: 129 RLWDVKDRKQIIGK-KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           RL+DV   +++ G  +F  + A WR++ H +SD +Y  ITGE G F+SR++FV+ES    
Sbjct: 121 RLFDVFSGQELGGGLQFAGTTAGWRRMGHKVSDAVYSRITGEGGYFDSRVVFVAESGPKD 180

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L VMD DGAN+++LT S   I+  PRFSP   +V Y +++     R+ L+D   D
Sbjct: 181 NRLKRLAVMDYDGANVQFLTDS-SSIVLAPRFSPRGDQVLYTSFE-SGFPRINLLDV-AD 237

Query: 248 RAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            A ++I      M  +PRFS +G++ + S+      DIY  DL +    RLT T  I+ +
Sbjct: 238 VARRQIATAPGEMSFSPRFSRDGRQVIYSLSNGATTDIYRTDLDTGQHVRLTATPSIDTA 297

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S SPD SQIVFESDR G +QLY+M S G D +RIS   E  Y  PVWSP+GDL+AFTK 
Sbjct: 298 PSLSPDGSQIVFESDRSGSQQLYIMSSTGGDARRISF-GEGRYSTPVWSPRGDLVAFTKQ 356

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNG 425
           +  +F IGVM+ DGS+ERLL      +APTWSP+GR ++F+R+  G D  S LYS+D++G
Sbjct: 357 NAGRFHIGVMRTDGSEERLLTSSFLDEAPTWSPNGRVIMFTRETQGADGASALYSVDISG 416

Query: 426 RNETLINTPAYASDPQW 442
           RN   +   + ASD  W
Sbjct: 417 RNLRAVPIQSAASDASW 433


>gi|294678712|ref|YP_003579327.1| TolB protein [Rhodobacter capsulatus SB 1003]
 gi|294477532|gb|ADE86920.1| TolB protein [Rhodobacter capsulatus SB 1003]
          Length = 437

 Score =  286 bits (731), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 157/401 (39%), Positives = 240/401 (59%), Gaps = 10/401 (2%)

Query: 47  PVSIAFTKFV--SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWN 104
           P+  A   FV      L  +++ V++ DL  + +F  I + +  Q+  + D+   + DW 
Sbjct: 37  PLPYALPTFVDEGAGSLASQITRVIADDLSGTGLFREIPEAAHIQRFGSFDTPVSYADWQ 96

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIY 163
           ++ AQ L+ G V   G  ++ V+FRL DV    Q+  G++  +SP SWR++AH ++D IY
Sbjct: 97  AINAQALINGSVGMSGG-KVVVKFRLHDVYGNTQLGDGQQLAASPQSWRRLAHKVADVIY 155

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
             ITGE G F+SR+++VSE+      +  L +MD DG N+ YLT S   I+  PRFSP  
Sbjct: 156 ARITGESGYFDSRVVYVSETGPKDQRQKRLAIMDYDGENVNYLTDS-STIVLAPRFSPQG 214

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALISVQKDEAM 282
            ++ Y T++     R+ +M    + A K +     +M  +PRFS +G   + S++++   
Sbjct: 215 DRILYTTFE-TGFPRIKMMSVG-NAAGKLLPEVPGTMTFSPRFSPDGGSIVYSLEQNGNT 272

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y + +   + ERLTN+  I  + SYSPD SQIVFESDR G +Q+YVM ++G +  RIS
Sbjct: 273 DLYRMSVSGGSVERLTNSPAIETAPSYSPDGSQIVFESDRSGTQQIYVMSASGGEPVRIS 332

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            + +  Y  PVWSP+GDLIAFTK SG +F IGVM+ DGS+ER L      + PTW+P+GR
Sbjct: 333 -NGDGRYGTPVWSPRGDLIAFTKQSGGRFFIGVMRTDGSEERDLTASYLDEGPTWAPNGR 391

Query: 403 SLIFSRKKDGDT-GSKLYSIDLNGRNETLINTPAYASDPQW 442
            L+F+R+  G   G+K++++D+ GRN   +     ASDP W
Sbjct: 392 VLMFTRESPGAAGGAKMFTVDITGRNLKAVAGVGGASDPTW 432


>gi|254464281|ref|ZP_05077692.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacterales
           bacterium Y4I]
 gi|206685189|gb|EDZ45671.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacterales
           bacterium Y4I]
          Length = 441

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 154/378 (40%), Positives = 233/378 (61%), Gaps = 8/378 (2%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V++ DL  + +F  +   +   K+T  D   +F DW ++ AQ L+TG V   G + L V 
Sbjct: 64  VIASDLSGTGLFREVPASAHISKVTAFDGPVKFADWKAVNAQALITGAVSVTG-NGLTVR 122

Query: 128 FRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           FR +DV   K++    +F  +   WR++AH ++D IY  ITGE G F+SR+++VSES   
Sbjct: 123 FRGYDVFAEKELETALQFTGTTDGWRRMAHKVADAIYSEITGESGYFDSRVVYVSESGPK 182

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT-R 245
              +  L VMD DGAN++YLT S   I+  PRFSP   +V Y +Y+     +++++D  +
Sbjct: 183 NDRRKRLAVMDYDGANVQYLTNSA-SIVLAPRFSPAGDRVLYTSYE-SGFPQIHVLDVGQ 240

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           + R     G+  +M  APRF+ +G+  + S  +    D++++D+++ A  RLT+   I  
Sbjct: 241 VQRKVLSSGD-GTMSFAPRFAPDGRTIVYSQTQGGNTDLFAMDIETGAKTRLTSAPSIET 299

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + S+SPD SQIVFESDR G +QLYVM + G + +RIS   E  Y  PVWSP+GD++AFTK
Sbjct: 300 APSFSPDGSQIVFESDRSGSQQLYVMPAGGGEARRISFG-EGRYGTPVWSPRGDMVAFTK 358

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLN 424
            +  +F IGVM+ DGS+ERLL      + PTW+P+GR ++F+R+  G +G + LYS+D+ 
Sbjct: 359 QNKGRFHIGVMRTDGSEERLLTASFLDEGPTWAPNGRVIMFTRESQGSSGRALLYSVDIT 418

Query: 425 GRNETLINTPAYASDPQW 442
           GRN   + TP  ASDP W
Sbjct: 419 GRNLKPVKTPDGASDPSW 436


>gi|238650751|ref|YP_002916604.1| translocation protein TolB [Rickettsia peacockii str. Rustic]
 gi|259533880|sp|C4K1V5|TOLB_RICPU RecName: Full=Protein tolB; Flags: Precursor
 gi|238624849|gb|ACR47555.1| translocation protein TolB [Rickettsia peacockii str. Rustic]
          Length = 444

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 164/445 (36%), Positives = 252/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF     + D LG  + +V+S DL+
Sbjct: 4   IIYFILSLLFSVTSYALETINIEHGRADPTPIAVNKFDADNSAADVLGHDMVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    + ++ F LWD  
Sbjct: 64  LSGLFRPISAASFIEEKTGIEYKPLFAAWRQINASLLVNGEVTKLESGKFQISFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ++G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLVGEILEVPKNLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIKR-IA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  +L  PRF+ +  K+ Y +Y  +  + VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKSLVL-TPRFARSADKIFYVSYATKRRVLVYEKDLKTGKE-SVVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  
Sbjct: 241 DFPGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGK 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYAAPSWSPRGDYIAFTKITKGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSID 422
           F IG+MK     D + ER++     +++P WSP+GR ++F++           +K+++ID
Sbjct: 360 FNIGIMKACPQDDKNSERIITSGYLVESPCWSPNGRVIMFAKGWPSSAKAPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TPA ASDP+W G ++
Sbjct: 420 LTGHNEREIMTPADASDPEWSGVLN 444


>gi|329888411|ref|ZP_08267009.1| tol-Pal system beta propeller repeat protein TolB [Brevundimonas
           diminuta ATCC 11568]
 gi|328846967|gb|EGF96529.1| tol-Pal system beta propeller repeat protein TolB [Brevundimonas
           diminuta ATCC 11568]
          Length = 486

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 157/402 (39%), Positives = 238/402 (59%), Gaps = 8/402 (1%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P+ IA   F    + G ++S V+S +L+RS  F+ ++  SF +      + P F  W S+
Sbjct: 75  PLQIAVVPFTG--QNGSQISGVISGNLKRSGFFDPLNPASFVETGLTLANAPNFPQWTSI 132

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           GAQ ++ G V      R+ V FRL+D   + Q++  +F ++   WR+IAH ISD +YQ +
Sbjct: 133 GAQAVLYGGVTPRADGRIDVGFRLYDPYRQCQLVSYQFTATSEQWRRIAHKISDVVYQRL 192

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQK 225
           TGE G F+SR+LFVSES       + L ++D+DG N  +LT   D+++  PRFS  N  +
Sbjct: 193 TGEAGFFDSRVLFVSESGTQLNKLSRLTIVDQDGYNPVFLTQG-DEVIMSPRFSASNPDE 251

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           V Y     +D  R+YL +    R  + +G F   +LAPRFS++G +   S+ +    D+Y
Sbjct: 252 VTYVAL-GKDYSRIYLYNLSTGRR-ESLGEFDGQVLAPRFSNDGSKMAFSIIRGGNTDVY 309

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            ++L+S    RLT    I+ S S+SPD +QIVF SDR G  +LY M+++GS Q+ IS+  
Sbjct: 310 VMNLRSRQLSRLTTDPGIDTSPSFSPDGNQIVFTSDRSGSARLYTMRADGSGQRPISRGG 369

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             SY  P WSP+GDL+AFTK  G +F IGVMK DG+ ER+L      + P+W+P+GR + 
Sbjct: 370 -GSYTAPAWSPRGDLVAFTKQQGGRFHIGVMKSDGTGERILSSSYFEEGPSWAPNGRYIA 428

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           F+R+  G   ++L+++DL+GR  +        SDP W G +D
Sbjct: 429 FARQSPGGD-TRLWTVDLSGRVVSQAGYDGRGSDPAWSGLLD 469


>gi|332188231|ref|ZP_08389959.1| tol-Pal system beta propeller repeat protein TolB [Sphingomonas sp.
           S17]
 gi|332011730|gb|EGI53807.1| tol-Pal system beta propeller repeat protein TolB [Sphingomonas sp.
           S17]
          Length = 472

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 159/396 (40%), Positives = 227/396 (57%), Gaps = 8/396 (2%)

Query: 49  SIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD-SIPRFQDWNSLG 107
           ++  T   + D +G ++S++++ DL+ S +F  I     +  ++ P+ + P F  WN  G
Sbjct: 78  AVVQTAAGTTDVVGQQLSQIIANDLRNSGLFTPIPPAQLR-TVSFPEVTAPAFDYWNGTG 136

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
           AQ LV G V   G   L V   L+DV  + ++  + F   PA WR+ AH  +D IY  +T
Sbjct: 137 AQALVQGYVRANGDGTLTVGCYLYDVLAKSELARQGFVVQPAEWRRAAHKCADSIYTKLT 196

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           GE   F+SRI++VSE+         L +MD+DGAN R+LT +   I+  PRF+PNQQ + 
Sbjct: 197 GEGPYFDSRIVYVSETGPKARRIKRLAIMDQDGANHRFLT-NGQSIVLTPRFAPNQQSIV 255

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y +Y D+    +Y+ D    R    + N  +   APRFS +G+  L S+ +    DIY V
Sbjct: 256 YMSYVDKRPA-IYVYDIGSGRQRLVVQN-AATTFAPRFSPDGRWILFSMAQGGNTDIYRV 313

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             Q    +RLTN+  I+   SYSPD S+IVFESDR G +Q+YVM ++GS+Q+RIS     
Sbjct: 314 SAQGGTPQRLTNSPGIDTGGSYSPDGSKIVFESDRSGGQQIYVMNADGSNQQRISFGG-G 372

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            Y  PVWSP+GDLIAFTK  G  F IG+M   G  E+LL      + P+WSP+GR + F 
Sbjct: 373 RYATPVWSPRGDLIAFTKLGG-AFRIGIMNPSGGAEKLLTNSWQDEGPSWSPNGRVITFQ 431

Query: 408 RKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
           R   G +G + ++ +DL G NE  I TP   SDP W
Sbjct: 432 RTTQGSSGKADVWMVDLTGVNERRIPTPLDGSDPAW 467


>gi|34580657|ref|ZP_00142137.1| tolB protein precursor [Rickettsia sibirica 246]
 gi|28262042|gb|EAA25546.1| tolB protein precursor [Rickettsia sibirica 246]
          Length = 444

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 165/445 (37%), Positives = 251/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF     + D LG  + +V+S DL+
Sbjct: 4   IIYFILSLLFSVTSYALETINIEHGRADPTPIAVNKFDADNSAADVLGHDMVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    + +V F LWD  
Sbjct: 64  LSGLFRPISAASFIEEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKFKVSFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ+ G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLAGEMLEVPKNLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIKR-IA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  +L  PRF+ +  K+ Y +Y  +  + VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKSLVL-TPRFARSADKIFYVSYATKRRVLVYEKDLKTGKE-SVVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  
Sbjct: 241 DFPGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGK 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFG-SGSYATPSWSPRGDYIAFTKITKGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSID 422
           F IG+MK     D + ER++     +++P WSP+GR ++F++           +K+++ID
Sbjct: 360 FNIGIMKACPQDDENSERIITSGYLVESPCWSPNGRVIMFAKGWPSSAKAPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TPA ASDP+W G ++
Sbjct: 420 LTGHNEREIMTPADASDPEWSGVLN 444


>gi|157828282|ref|YP_001494524.1| translocation protein TolB [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|166229989|sp|A8GRJ1|TOLB_RICRS RecName: Full=Protein tolB; Flags: Precursor
 gi|157800763|gb|ABV76016.1| translocation protein TolB precursor [Rickettsia rickettsii str.
           'Sheila Smith']
          Length = 444

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 163/445 (36%), Positives = 253/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----IDELGGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF +     D LG  + +V+S DL+
Sbjct: 4   IIYFILSLLFSVTSYALETINIEHGRADPTPIAVNKFYADNSAADVLGHDMVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    + ++ F LWD  
Sbjct: 64  LSGLFRPISAASFIEEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKFQISFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ++G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLVGEILEVPKNLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIKR-IA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  +L  PRF+ +  K+ Y +Y  +  + VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKSLVL-TPRFARSADKIFYVSYATKRRVLVYEKDLKTGKE-SVVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD +
Sbjct: 241 DFPGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGT 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYAAPSWSPRGDYIAFTKITKGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSID 422
           F IG+MK     + + ER++     +++P WSP+GR ++F++           +K+++ID
Sbjct: 360 FNIGIMKACPQDNKNSERIITSGYLVESPCWSPNGRVIMFAKGWPSSSKAPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TPA ASDP+W G ++
Sbjct: 420 LTGHNEREIMTPADASDPEWSGVLN 444


>gi|15892329|ref|NP_360043.1| translocation protein TolB [Rickettsia conorii str. Malish 7]
 gi|32699713|sp|Q92IL4|TOLB_RICCN RecName: Full=Protein tolB; Flags: Precursor
 gi|15619474|gb|AAL02944.1| tolB protein precursor [Rickettsia conorii str. Malish 7]
          Length = 444

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 165/445 (37%), Positives = 251/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF     + D LG  + +V+S DL+
Sbjct: 4   IIYFILSLLFSVTSYALETINIEHGRADPTPIAVNKFDADNSAADVLGHDMVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    + +V F LWD  
Sbjct: 64  LSGLFRPISAASFIEEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKFKVSFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ+ G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLAGEMLEVPKNLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIKR-IA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  +L  PRF+ +  K+ Y +Y  +  + VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKSLVL-TPRFARSADKIFYVSYATKRRVLVYEKDLKTGKE-SVVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  
Sbjct: 241 DFPGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKQLHKLTDGFGINTSPSYSPDGK 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYAAPSWSPRGDYIAFTKITKGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSID 422
           F IG+MK     D + ER++     +++P WSP+GR ++F++           +K+++ID
Sbjct: 360 FNIGIMKACPQDDENSERIITSGYLVESPCWSPNGRVIMFAKGWPSSAKAPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TPA ASDP+W G ++
Sbjct: 420 LTGHNEREIMTPADASDPEWSGVLN 444


>gi|165932986|ref|YP_001649775.1| translocation protein TolB [Rickettsia rickettsii str. Iowa]
 gi|189035986|sp|B0BWZ3|TOLB_RICRO RecName: Full=Protein tolB; Flags: Precursor
 gi|165908073|gb|ABY72369.1| TolB [Rickettsia rickettsii str. Iowa]
          Length = 444

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 163/445 (36%), Positives = 253/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----IDELGGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF +     D LG  + +V+S DL+
Sbjct: 4   IIYFILSLLFSVTSYALETINIEHGRADPTPIAVNKFYADNSAADVLGHDMVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    + ++ F LWD  
Sbjct: 64  LSGLFRPISAASFIEEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKFQISFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ++G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLVGEILEVPKNLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIKR-IA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  +L  PRF+ +  K+ Y +Y  +  + VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKSLVL-TPRFARSADKIFYVSYATKRRVLVYEKDLKTGKE-SVVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD +
Sbjct: 241 DFPGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGT 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYAAPSWSPRGDYIAFTKITKGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSID 422
           F IG+MK     + + ER++     +++P WSP+GR ++F++           +K+++ID
Sbjct: 360 FNIGIMKACPQDNKNSERIITSGYLVESPCWSPNGRVIMFAKGWPSSAKAPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TPA ASDP+W G ++
Sbjct: 420 LTGHNEREIMTPADASDPEWSGVLN 444


>gi|67458884|ref|YP_246508.1| translocation protein TolB [Rickettsia felis URRWXCal2]
 gi|75536675|sp|Q4UM77|TOLB_RICFE RecName: Full=Protein tolB; Flags: Precursor
 gi|67004417|gb|AAY61343.1| TolB protein precursor [Rickettsia felis URRWXCal2]
          Length = 444

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 164/431 (38%), Positives = 247/431 (57%), Gaps = 20/431 (4%)

Query: 33  HAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
           +A   +        P  IA  KF     + D +G  V +V+S DL+ S +F  IS  SF 
Sbjct: 18  YALETINIEHGRADPTPIAVNKFNADSSADDVVGHDVVKVISNDLKLSGLFRPISSASFI 77

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
           ++ T  +  P F  W  + A +LV G V K    +L++ F LWD    KQ+ G+   +  
Sbjct: 78  EEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKLKISFILWDTLLEKQLAGEILEAPE 137

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
             WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + +MD DGAN +YLT 
Sbjct: 138 NLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESTSLPKIKR-IALMDYDGANNKYLTN 196

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            +  +L  PRF+ +  K+ Y +Y  +    VY  D +  +    +G+F  +  APRFS +
Sbjct: 197 GKSLVL-TPRFARSADKIFYVSYATKRRALVYEKDLKTGKE-SVVGDFSGISFAPRFSPD 254

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  +IV+ SDR G  QL
Sbjct: 255 GRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGKKIVYNSDRNGVPQL 314

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEKFAIGVMKK----DG 380
           Y+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ F IG+MK     D 
Sbjct: 315 YIMNSDGSDVQRISFGG-GSYTAPSWSPRGDYIAFTKITRGAEGKTFNIGIMKACPQDDE 373

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGRNETLINTPAY 436
           + ER++     +++P WSP+GR ++F++    +      +K+++IDL G NE  I TPA 
Sbjct: 374 NSERIITSGYLVESPCWSPNGRVIMFAKGWPSRAKAPGKNKIFAIDLTGHNEREIITPAD 433

Query: 437 ASDPQWVGFMD 447
           ASDP+W G ++
Sbjct: 434 ASDPEWSGVLN 444


>gi|157825542|ref|YP_001493262.1| translocation protein TolB [Rickettsia akari str. Hartford]
 gi|166229986|sp|A8GMX9|TOLB_RICAH RecName: Full=Protein tolB; Flags: Precursor
 gi|157799500|gb|ABV74754.1| translocation protein TolB precursor [Rickettsia akari str.
           Hartford]
          Length = 444

 Score =  283 bits (724), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 171/451 (37%), Positives = 255/451 (56%), Gaps = 28/451 (6%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE-----LGGKVSEVVS 70
           N+   ++L+   F    +A   +       +P  IA  KF +ID      LG  V +V+S
Sbjct: 3   NIIYFILLL--LFSFKGYALETINIEHGQAAPTPIAVNKF-NIDSSADYVLGNDVVKVIS 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S VF  IS  SF ++ T  +  P F  W  + A +LV G + K    +L++ F L
Sbjct: 60  NDLKLSGVFCPISSASFIEERTGIEYKPLFAAWRQINASLLVNGEIKKLESGKLKISFIL 119

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           WD    KQ+ G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK
Sbjct: 120 WDTLLEKQLAGEILEVPENLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESTSLPKIK 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             + +MD DGAN +YLT  R  +L  PRF+ +  K+ Y +Y  +    VY  D +  +  
Sbjct: 180 R-IALMDYDGANNKYLTNGRSLVL-TPRFARSADKIFYVSYATKRRALVYEKDLKTGKE- 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             +G+F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYS
Sbjct: 237 SVVGDFSGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYS 296

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
           PD  +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK     
Sbjct: 297 PDGKKIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYTAPSWSPRGDYIAFTKIIRGA 355

Query: 367 SGEKFAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFSR------KKDGDTGS 416
            G+ F IG+MK     D ++ER++     +++P WSP+GR ++F++      K  G   +
Sbjct: 356 EGKTFNIGIMKAYPQDDENRERIITSGYLVESPCWSPNGRVIMFAKGWPSGAKAPGK--N 413

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           K+++IDL G NE  I TP  ASDP+W G ++
Sbjct: 414 KIFAIDLTGHNEREIITPEDASDPEWSGVLN 444


>gi|229586559|ref|YP_002845060.1| translocation protein TolB [Rickettsia africae ESF-5]
 gi|259533877|sp|C3PN07|TOLB_RICAE RecName: Full=Protein tolB; Flags: Precursor
 gi|228021609|gb|ACP53317.1| TolB protein precursor [Rickettsia africae ESF-5]
          Length = 444

 Score =  282 bits (721), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 164/445 (36%), Positives = 251/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF     + D LG  + +V+S DL+
Sbjct: 4   IIYFILSLLFSVTSYALETINIEHGRADPTPIAVNKFDADNSAADVLGHDMVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    + +V F LWD  
Sbjct: 64  LSGLFRPISAASFIEEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKFKVSFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ+ G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLAGEMLEVPKNLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIKR-IA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  +L  PRF+ +  K+ Y +Y  +  + VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKSLVL-TPRFARSADKIFYVSYATKRRVLVYEKDLKTGKE-SVVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  
Sbjct: 241 DFPGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGK 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYAAPSWSPRGDYIAFTKITKGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSID 422
           F IG+MK     D + E+++     +++P WSP+GR ++F++           +K+++ID
Sbjct: 360 FNIGIMKACPQDDENSEKIITSGYLVESPCWSPNGRVIMFAKGWPSSAKAPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TPA ASDP+W G ++
Sbjct: 420 LTGHNEREIMTPADASDPEWSGVLN 444


>gi|114570966|ref|YP_757646.1| TolB domain-containing protein [Maricaulis maris MCS10]
 gi|114341428|gb|ABI66708.1| TolB, N-terminal domain protein [Maricaulis maris MCS10]
          Length = 453

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 164/443 (37%), Positives = 247/443 (55%), Gaps = 19/443 (4%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI-DEL---GGKVSEVVSKD 72
              LL LIG    +     ++V     N  P+ IA   FV   DE    G  ++ VV+ D
Sbjct: 8   FAALLALIGWSAASDAQEPLRVDVTQGNLDPMPIAVPDFVGASDEALRRGADITRVVAND 67

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L  S +F  + QD+F + I N D  PRF DW  + A  L+ G V  +   RL V FRLWD
Sbjct: 68  LASSGLFAPVDQDAFIEDIANIDLRPRFSDWRVINADALLVGSVTIQEDGRLVVGFRLWD 127

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKN 191
            +  +Q++G ++ ++P +WR++AH ++D +Y+ +TGE G FN+RI++VSE   + G    
Sbjct: 128 TRLEEQLLGLQYRTAPENWRRVAHRLADAVYERLTGETGYFNTRIVYVSEGRGIEGEPIR 187

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILRVYLMDTRIDRAP 250
            L +MD+DGAN  +LT  R  +   P +SP+ Q++ Y ++ D +    +Y ++T    A 
Sbjct: 188 QLALMDQDGANPSFLT-DRSYMALLPNYSPSAQEITYVSFLDGQATTYLYNLETGRQEAL 246

Query: 251 KRIGNFRS--------MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
              G   +          L+ RFS +G    +S++     DI+  DLQ+   +RLT    
Sbjct: 247 FASGGAGAASQVDPDGQSLSARFSPDGSELAVSIETRSGHDIHLFDLQTRNLQRLTQHPA 306

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            ++  S++PD  +IVF S R G  QLYVM  +GSD +RI+      Y  PVWSP+GDLIA
Sbjct: 307 DDVEPSFAPDGERIVFSSARGGGSQLYVMNRDGSDVQRITF-GSGRYTTPVWSPRGDLIA 365

Query: 363 FTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK--LY 419
           FTK  G +F++GV++ DGS  ER+L E   +  P WSP+GR L+F+R +    G++  ++
Sbjct: 366 FTKQVGGQFSLGVVRADGSGIERILFEGYFVDTPAWSPNGRVLLFTRGEQRANGTRYEIW 425

Query: 420 SIDLNGRNETLINTPAYASDPQW 442
           S+DL G N   + T   ASDP W
Sbjct: 426 SVDLAGFNLRRLATGGMASDPAW 448


>gi|51473498|ref|YP_067255.1| translocation protein TolB [Rickettsia typhi str. Wilmington]
 gi|67461946|sp|Q68X69|TOLB_RICTY RecName: Full=Protein tolB; Flags: Precursor
 gi|51459810|gb|AAU03773.1| TolB protein precursor [Rickettsia typhi str. Wilmington]
          Length = 443

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 167/439 (38%), Positives = 248/439 (56%), Gaps = 20/439 (4%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQR 75
           ++  I   F  + +A   +        P  IA  KF     + D +G  V +V+S DL+ 
Sbjct: 4   IVYFILTLFSLTGYALETINIEHGRVDPTPIAVNKFNADSSNNDLVGNAVVKVISNDLKI 63

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F  IS  SF ++ T  +  P F  W  + A +LV G V      +L++ F LWD   
Sbjct: 64  SGLFRPISSASFIEEQTGINYKPLFAAWRQINASLLVNGEVQTLESGKLKISFILWDTFL 123

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            KQ+IG  F      WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + +
Sbjct: 124 EKQLIGALFEVPTKLWRRAAHKIADKIYEKITGDPGYFDTKIVYVSESTALPKIKR-IAL 182

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD DGAN +YLT  +  +L  PRF+ +  K+ Y +Y  +    VY  D +  +    +G+
Sbjct: 183 MDYDGANNKYLTNGKSLVL-TPRFAHSADKIFYVSYATKSRALVYEKDLKTGKE-SVVGD 240

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F  +  APRFS +GK+A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  +
Sbjct: 241 FVGISFAPRFSPDGKKAVMSIAKNGSTHIYEIDLATKQLNKLTDGFGINTSPSYSPDGKK 300

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEK-F 371
           IV+ SD+ G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +   GEK F
Sbjct: 301 IVYNSDKNGVPQLYIMNSDGSDVRRISFGG-GSYASPSWSPRGDYIAFTKITRHDGEKIF 359

Query: 372 AIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDL 423
            IG+MK       + ER++     +++P WSP+GR ++FS+    +      +K+++IDL
Sbjct: 360 NIGIMKAYPQDHENSERIITSGYLVESPCWSPNGRVIMFSKGWPSRAKAPGKNKIFTIDL 419

Query: 424 NGRNETLINTPAYASDPQW 442
            G NE  + TPA ASDP+W
Sbjct: 420 TGHNEREVITPAGASDPEW 438


>gi|296117355|ref|ZP_06835945.1| translocation protein TolB [Gluconacetobacter hansenii ATCC 23769]
 gi|295976121|gb|EFG82909.1| translocation protein TolB [Gluconacetobacter hansenii ATCC 23769]
          Length = 457

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 168/438 (38%), Positives = 239/438 (54%), Gaps = 34/438 (7%)

Query: 23  LIGGFFPTSIHAFVKVA------------TNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           + GG   T + A V VA             + A  +P+ I        + +G ++++V+S
Sbjct: 31  IAGGLLATPLFAPVGVAHAQSAAPDAEITVDQARTAPIPIVIPSLG--NGIGQQITDVIS 88

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL    +F  IS        + P   P F  + ++GA+ +V+GR    G   +RVEFRL
Sbjct: 89  ADLGNCGLFRPISA-------SMPTGRPDFATYKTMGARAMVSGRAENTGSS-IRVEFRL 140

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           WDV    QI G  + +S   WR+IAH ISD IY  + GEKG FNSRI +V+ S       
Sbjct: 141 WDVTTGSQIQGTAYTASSQDWRRIAHVISDVIYTRLLGEKGYFNSRIAYVAMSGPRSHQT 200

Query: 191 NSLCVMDRDGANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             L +MD+DGA+ RYLT  + D I   PRF+P   ++A+ +Y +    RVYL +    + 
Sbjct: 201 RRLAIMDQDGADSRYLTSGQWDTI--TPRFNPANSELAFMSYINNR-PRVYLFNLNTGQQ 257

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            + +G F  M  APRFS  G   ++SV +    D+YSVDL S +  ++T +  I+ S  Y
Sbjct: 258 -RMLGEFSGMSFAPRFSPRGDAVVLSVTRGSGSDLYSVDLSSMSRHQITASGAIDTSPCY 316

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD SQIVF SDR G  QLYVM + G D KRIS      Y  PVWSP+GDLIAF++ +  
Sbjct: 317 SPDGSQIVFNSDRGGSPQLYVMPATGGDAKRISY-GHGHYGSPVWSPRGDLIAFSRIANG 375

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-----SKLYSIDLN 424
            F++GVM  DG+ ER+L +   +++PT+ P+GR L F R+     G     S + SID+ 
Sbjct: 376 SFSLGVMAPDGTGERILTQGFTVESPTFCPNGRVLAFCRQTAAHAGGAGFSSGISSIDIT 435

Query: 425 GRNETLINTPAYASDPQW 442
           G +E  +     +SDP W
Sbjct: 436 GFHERPLPV-GSSSDPTW 452


>gi|56416532|ref|YP_153606.1| translocation protein TolB [Anaplasma marginale str. St. Maries]
 gi|254994752|ref|ZP_05276942.1| translocation protein TolB [Anaplasma marginale str. Mississippi]
 gi|255004004|ref|ZP_05278805.1| translocation protein TolB [Anaplasma marginale str. Virginia]
 gi|67461908|sp|Q5PBH8|TOLB_ANAMM RecName: Full=Protein tolB; Flags: Precursor
 gi|56387764|gb|AAV86351.1| TolB protein precursor [Anaplasma marginale str. St. Maries]
          Length = 441

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 150/387 (38%), Positives = 228/387 (58%), Gaps = 10/387 (2%)

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
           E+G     V+ +DL  + +F+   +       T  + +P    W S+   VLVTG + + 
Sbjct: 55  EIGKSCIRVMLRDLNSTGIFDASWKLPAGGFSTTSEGMPDSNAWTSVAKDVLVTGSIKEF 114

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
            + R++V+  +WDV   +Q+ GK F  +  +WR+ AH++SD IY  ITGE G FN+RI +
Sbjct: 115 AQGRVKVKLFIWDVASGRQLSGKSFNFATGNWRRAAHSMSDSIYSRITGEGGYFNTRIAY 174

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V+E+ + G     + +MD+DGAN  Y+T  R + +  PRFSP+ + + Y +Y       V
Sbjct: 175 VAETGLPG--SRRIAIMDQDGANNIYIT-GRGEFVSTPRFSPDARNLVYMSYAKSG-GSV 230

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L D     +   +G  R +  +PRFS +G+  L+S     + +IYS+DL+S  + RLTN
Sbjct: 231 VLHDLETGYS-TALGGVRGVNSSPRFSPDGRHVLLSESAQGSTNIYSIDLKSGKSTRLTN 289

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              IN SASYSPD   IVF SDR G+ QLYVM ++G++Q+RIS  K   Y  P WSP+GD
Sbjct: 290 DRSINTSASYSPDKKSIVFNSDRSGRPQLYVMNADGTNQRRISSGK-GGYSAPAWSPRGD 348

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG---- 415
            IAFTK  G+ F +GVMK DGS ERLL +   + +P+WSP+GR ++F+++          
Sbjct: 349 WIAFTKTEGKSFHVGVMKPDGSGERLLAKGYMVDSPSWSPNGRVILFTQQDPPSATHPFR 408

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQW 442
           S+L ++D+ G N  +++ P  AS+  W
Sbjct: 409 SRLVTVDITGTNTQILDVPTNASNAHW 435


>gi|222474900|ref|YP_002563315.1| TOLB protein precursor (tolB) [Anaplasma marginale str. Florida]
 gi|255002872|ref|ZP_05277836.1| translocation protein TolB [Anaplasma marginale str. Puerto Rico]
 gi|222419036|gb|ACM49059.1| TOLB protein precursor (tolB) [Anaplasma marginale str. Florida]
          Length = 441

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 150/387 (38%), Positives = 228/387 (58%), Gaps = 10/387 (2%)

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
           E+G     V+ +DL  + +F+   +       T  + +P    W S+   VLVTG + + 
Sbjct: 55  EIGKSCIRVMLRDLNSTGIFDASWKLPAGGFGTTSEGMPDSNAWTSVAKDVLVTGSIKEF 114

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
            + R++V+  +WDV   +Q+ GK F  +  +WR+ AH++SD IY  ITGE G FN+RI +
Sbjct: 115 AQGRVKVKLFIWDVASGRQLSGKSFNFATGNWRRAAHSMSDSIYSRITGEGGYFNTRIAY 174

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V+E+ + G     + +MD+DGAN  Y+T  R + +  PRFSP+ + + Y +Y       V
Sbjct: 175 VAETGLPG--SRRIAIMDQDGANNIYIT-GRGEFVSTPRFSPDARNLVYMSYAKSG-GSV 230

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L D     +   +G  R +  +PRFS +G+  L+S     + +IYS+DL+S  + RLTN
Sbjct: 231 VLHDLETGYS-TALGGVRGVNSSPRFSPDGRHVLLSESAQGSTNIYSIDLKSGKSTRLTN 289

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              IN SASYSPD   IVF SDR G+ QLYVM ++G++Q+RIS  K   Y  P WSP+GD
Sbjct: 290 DRSINTSASYSPDKKSIVFNSDRSGRPQLYVMNADGTNQRRISSGK-GGYSAPAWSPRGD 348

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG---- 415
            IAFTK  G+ F +GVMK DGS ERLL +   + +P+WSP+GR ++F+++          
Sbjct: 349 WIAFTKTEGKSFHVGVMKPDGSGERLLAKGYMVDSPSWSPNGRVILFTQQDPPSATHPFR 408

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQW 442
           S+L ++D+ G N  +++ P  AS+  W
Sbjct: 409 SRLVTVDITGTNTQILDVPTNASNAHW 435


>gi|157964377|ref|YP_001499201.1| translocation protein TolB [Rickettsia massiliae MTU5]
 gi|166988078|sp|A8F168|TOLB_RICM5 RecName: Full=Protein tolB; Flags: Precursor
 gi|157844153|gb|ABV84654.1| TolB protein precursor [Rickettsia massiliae MTU5]
          Length = 444

 Score =  280 bits (716), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 163/445 (36%), Positives = 251/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF     + D LG  + +V+S DL+
Sbjct: 4   IIYFILSLLFSFASYALETINIEHGRADPTPIAVNKFNADNSAADVLGHDMVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    + ++ F LWD  
Sbjct: 64  LSGLFRPISAASFIEEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKFKISFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ+ G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLAGEILEVPENLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESNSLPKIKR-IA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  +L  PRF+ +  K+ Y +Y  +    VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKSLVL-TPRFARSADKIFYVSYATKRRALVYEKDLKTGKE-SVVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ ++ +  IY +DL +    +LT+   IN S SYSPD  
Sbjct: 241 DFPGISFAPRFSPDGRKAVMSIAQNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGK 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYAAPSWSPRGDYIAFTKITRGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSID 422
           F IG+MK     D + ER++     +++P WSP+GR ++F++    +      +K+++ID
Sbjct: 360 FNIGIMKACPQDDENSERIITSGYLVESPCWSPNGRVIMFTKGWPSRAKAPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TPA ASDP+W G ++
Sbjct: 420 LTGHNEREIMTPADASDPEWSGVLN 444


>gi|148555048|ref|YP_001262630.1| translocation protein TolB [Sphingomonas wittichii RW1]
 gi|166229992|sp|A5V876|TOLB_SPHWW RecName: Full=Protein tolB; Flags: Precursor
 gi|148500238|gb|ABQ68492.1| Tol-Pal system beta propeller repeat, TolB [Sphingomonas wittichii
           RW1]
          Length = 439

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 158/396 (39%), Positives = 229/396 (57%), Gaps = 9/396 (2%)

Query: 49  SIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD-SIPRFQDWNSLG 107
           ++A T       LG +V++VV+ DL+ S +F+ + + +  Q +T+P  + P +  W   G
Sbjct: 46  AVANTPAGDTAALGQRVADVVTNDLKNSGLFSPLPKSAL-QTVTHPQVTAPDYMFWTQSG 104

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
           AQ L+ G V   G   L V   L+DV  R ++  + F   PA WR+ AH  +D +Y  +T
Sbjct: 105 AQALIQGFVQANGDGSLTVGCYLYDVLARTELTRQGFVVQPAQWRRAAHKCADLVYTRLT 164

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           GE   F+SR+++VSE+         L +MD+DGAN R+LT +   I+  PRF+PNQQ + 
Sbjct: 165 GEGPYFDSRVVYVSETGPKTNRIKRLAIMDQDGANHRFLT-NGQTIVLTPRFAPNQQTIT 223

Query: 228 YATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           Y +Y + +  RVY+ D  I    +R + +  +M  APRFS +G+  + S+      DIY 
Sbjct: 224 YMSYTN-NRARVYVYD--IGSGSQRLVVDQPNMTFAPRFSPDGRTIVFSMAVGGNTDIYR 280

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V       +RLT +  I+  ASYSPD S+IVFESDR G +QLYVM ++GS+Q RIS    
Sbjct: 281 VSAGGGTPQRLTTSPGIDTGASYSPDGSKIVFESDRSGTQQLYVMNADGSNQNRISF-GS 339

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
             Y    WSP+GDLIAFTK  G  F +G+M  DGS E++L      + P+WSP+GR ++F
Sbjct: 340 GRYGSAAWSPRGDLIAFTKIGG-GFNVGIMNIDGSGEKILTNGWQDEGPSWSPNGRVIMF 398

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            R   G   + L+S+DL G NE  + TP   SDP W
Sbjct: 399 FRTAQGSGKADLWSVDLTGVNERPVPTPLDGSDPAW 434


>gi|239947882|ref|ZP_04699635.1| Tol-Pal system beta propeller repeat protein TolB [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239922158|gb|EER22182.1| Tol-Pal system beta propeller repeat protein TolB [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 444

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 165/445 (37%), Positives = 250/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF---VSIDEL-GGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF    S D + G  V +V+S DL+
Sbjct: 4   IIYFILSLLFSFTGYALETINIEHGRADPTPIAVNKFNADSSTDNVVGHDVVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    +L++ F LWD  
Sbjct: 64  LSGLFRPISSASFIEEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKLKISFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ+ G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLAGEILEVPETLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIKR-IA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  +L  PRF+ +  K+ Y +Y  +    VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKSLVL-TPRFARSADKIFYVSYATKRRALVYEKDLKTGKE-NVVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  
Sbjct: 241 DFSGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGK 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYTAPSWSPRGDYIAFTKITRGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSID 422
           F IG+MK     D + ER++     +++P WSP+GR ++F++    +      +K++ ID
Sbjct: 360 FNIGIMKACPQDDENSERIITSGYLVESPCWSPNGRVIMFAKGWPSRAKAPGKNKIFVID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TP  ASDP+W G ++
Sbjct: 420 LTGHNEREIITPTDASDPEWSGVLN 444


>gi|91205083|ref|YP_537438.1| translocation protein TolB [Rickettsia bellii RML369-C]
 gi|157827580|ref|YP_001496644.1| translocation protein TolB [Rickettsia bellii OSU 85-389]
 gi|119371058|sp|Q1RJW5|TOLB_RICBR RecName: Full=Protein tolB; Flags: Precursor
 gi|166229987|sp|A8GXK7|TOLB_RICB8 RecName: Full=Protein tolB; Flags: Precursor
 gi|91068627|gb|ABE04349.1| TolB protein precursor [Rickettsia bellii RML369-C]
 gi|157802884|gb|ABV79607.1| translocation protein TolB precursor [Rickettsia bellii OSU 85-389]
          Length = 444

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 164/446 (36%), Positives = 248/446 (55%), Gaps = 24/446 (5%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDL 73
           C+LL+     F  + +A   +        P  IA   F     S + +G ++ +V+S DL
Sbjct: 7   CILLL-----FSFNSYALETINIEHGKADPTPIAVNNFEADSASDNTVGHEIVKVISNDL 61

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
           +   +F+ IS  SF ++ T     P F  W  + A +LV G V K    +L++ F LWD 
Sbjct: 62  KLCGLFHPISSASFIEEKTGIGYKPLFAAWRQINASLLVNGAVKKLENGKLKISFILWDT 121

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
              KQ+ G+        WR+ AH I+D IY+ ITG+ G F+S+I++V+ES         +
Sbjct: 122 LLEKQLGGEVLELPENLWRRAAHKIADKIYEKITGDTGYFDSKIIYVAESGPDLKKVKRI 181

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD DGAN RY+T  +  +L  PRFS +  K+ Y +Y  +    VY  D +  +    +
Sbjct: 182 ALMDYDGANNRYITDGKSLVL-TPRFSGSADKIFYVSYATKRRTLVYEKDLKTGKE-SIV 239

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           G+F  +  APRF+ +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD 
Sbjct: 240 GDFAGISFAPRFAPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDG 299

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGE 369
            +IVF SDR G  QLY+M S+GS+ +RIS     SY  P WSP+GD IAFTK      G+
Sbjct: 300 RRIVFNSDRNGVPQLYIMNSDGSNVQRISFGG-GSYMAPSWSPRGDYIAFTKIIRGSEGK 358

Query: 370 KFAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFSR--KKDGDTGSK--LYSI 421
            F IGVMK     D + ER++     +++P WSP+GR ++F++    +G +  K  +Y+I
Sbjct: 359 TFNIGVMKPYPQDDENSERVIASGYLVESPCWSPNGRVIMFAKGWPSNGKSSGKNRIYAI 418

Query: 422 DLNGRNETLINTPAYASDPQWVGFMD 447
           DL G NE  I TP  ASDP+W   ++
Sbjct: 419 DLTGHNEREIKTPGDASDPEWSNLLN 444


>gi|56551061|ref|YP_161900.1| translocation protein TolB [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761363|ref|ZP_04759451.1| Tol-Pal system beta propeller repeat protein TolB [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
 gi|260753278|ref|YP_003226171.1| translocation protein TolB [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|67461903|sp|Q5NR65|TOLB_ZYMMO RecName: Full=Protein tolB; Flags: Precursor
 gi|56542635|gb|AAV88789.1| Tol-Pal system beta propeller repeat protein TolB [Zymomonas
           mobilis subsp. mobilis ZM4]
 gi|241374270|gb|EER63767.1| Tol-Pal system beta propeller repeat protein TolB [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
 gi|258552641|gb|ACV75587.1| Tol-Pal system beta propeller repeat protein TolB [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
          Length = 458

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 157/384 (40%), Positives = 222/384 (57%), Gaps = 9/384 (2%)

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD-SIPRFQDWNSLGAQVLVTGRVIKE 119
           LG +V+ V+S DL+ S +F    Q S    ++ P+ + P++  W S GAQ LV G V   
Sbjct: 77  LGRQVASVISNDLKSSGLFTPSQQASL-HNVSFPEVTAPQYSYWLSSGAQALVQGFVQAN 135

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           G   L V   L+DV   ++++ K F   PA WR+ AH  +D +Y  +TGE   F+SRI++
Sbjct: 136 GDGTLTVGCYLYDVFASQEMLHKGFVVKPADWRRAAHKCADAVYTRLTGEGPYFDSRIVY 195

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILR 238
           +SE+         L +MD+DGAN R+LT  +  +L  PRF+PNQQ V Y +Y  +   + 
Sbjct: 196 ISETGPKNHRLKRLAIMDQDGANHRFLTNGQSMVL-TPRFAPNQQTVTYLSYVGNSPRIY 254

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           VY + +   R    + N  +   APRFS +GK  + S+      DIY V +      RLT
Sbjct: 255 VYTLGSGHVRL---VVNKPNTTFAPRFSPDGKTIVFSMSVAGNTDIYKVPVSGGQATRLT 311

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +  I+ + S+SPD S+IVFESDR G +Q+Y+M ++GS+Q RIS      Y  PVWSP+G
Sbjct: 312 TSPGIDTAPSFSPDGSKIVFESDRSGSQQIYIMNADGSNQNRISFG-SGRYATPVWSPRG 370

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           DLIAFTK  G  F +GVMK DGS E++L      + P+WSP+GR + F R       ++L
Sbjct: 371 DLIAFTKLGG-GFHVGVMKTDGSGEQILTNGWQDEGPSWSPNGRVIAFFRTARNSGHTEL 429

Query: 419 YSIDLNGRNETLINTPAYASDPQW 442
           +S+DL G NE  I TP   SDP W
Sbjct: 430 WSVDLTGVNERHIPTPLDGSDPSW 453


>gi|329113830|ref|ZP_08242601.1| Protein TolB [Acetobacter pomorum DM001]
 gi|326696840|gb|EGE48510.1| Protein TolB [Acetobacter pomorum DM001]
          Length = 454

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 156/411 (37%), Positives = 239/411 (58%), Gaps = 19/411 (4%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
           ++  + A  +P+ I    F     LG K++EV++ DL  + +F ++   +          
Sbjct: 53  EITVDQARTAPIPIIIPNFGG--GLGEKIAEVLTNDLNNTGLFKVMPGSTTS-------G 103

Query: 97  IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            P F    S+GA   VTG V       +RVE RLWDV   +QI G  + +S A+WR+IAH
Sbjct: 104 TPDFATSKSMGAHAQVTGSVSGG-GSSVRVEMRLWDVLSHQQIQGTAYTTSAANWRRIAH 162

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            + D IYQ + GEKG F++RI F+S S   G  +  L VMD+DGAN R LT  +  +   
Sbjct: 163 IVGDVIYQRMLGEKGYFDTRIAFISRSGPRGHQRTRLAVMDQDGANARMLTTGK-WLTLT 221

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PRFSP + ++A+ +Y +    RVYL D    R  + +G F  +  APRFS +G+  ++SV
Sbjct: 222 PRFSPVKDQIAFMSYANNR-PRVYLFDLTSGRQ-QILGEFEGISFAPRFSPDGRSVVLSV 279

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            ++   D+Y VDL S +  ++T++  I+ S  +SPD SQIVF SDR G  Q+Y+M ++G 
Sbjct: 280 TRNGGSDLYVVDLASGSRRQITSSGAIDTSPCFSPDGSQIVFNSDRGGSPQIYIMPASGG 339

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             +RIS   + +Y  PVWSP+GDLIAFT+ +G  F++GVM  DG+ ER++ +   +++P+
Sbjct: 340 GARRISYG-QGTYGSPVWSPRGDLIAFTRIAGGMFSLGVMAPDGTGERIMTQGFTVESPS 398

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYS-----IDLNGRNETLINTPAYASDPQW 442
           + P+GR L + R+     G   +S     +D+ G N+ ++ TP  ASDP W
Sbjct: 399 FCPNGRVLAYCRQSRAGAGGAGFSSTIGMVDITGFNDRVLPTPEAASDPAW 449


>gi|302381977|ref|YP_003817800.1| Tol-Pal system beta propeller repeat protein TolB [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302192605|gb|ADL00177.1| Tol-Pal system beta propeller repeat protein TolB [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 466

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 155/412 (37%), Positives = 233/412 (56%), Gaps = 7/412 (1%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           ++V  +     P  IA   F   +  G  ++EV+S DL+RS  F  I+  SF +      
Sbjct: 46  IEVEIDQGVLRPFQIAVAPFSGQN--GASLTEVLSGDLRRSGFFEPINPGSFIETGLTLA 103

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
           + P F  W  +GAQ ++ G V      R    FRL+D   + Q++   F ++P  WR+IA
Sbjct: 104 NAPNFPQWTQIGAQAVLYGSVTPRPDGRNDFGFRLYDPYRQCQLVSYNFTATPEQWRRIA 163

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H I+D +Y  +TGE G F++RI++V+ES       + L ++D+DG N  +LT    +I+ 
Sbjct: 164 HKIADVVYARMTGESGVFDTRIIYVAESGTELNRLSRLAIVDQDGYNPVFLT-DGSEIIL 222

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            PRFS N  ++ Y     ED  R+YL + +  R  + +G F    LAPR+S +G +   S
Sbjct: 223 TPRFSSNPNEITYMAL-GEDYSRIYLYNLQTGRR-ESLGEFDGQALAPRYSPDGTKVAFS 280

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + +    D+Y ++L++    RLT+   I+ S S+SPD+S+IVF SDR G  +LYVM ++G
Sbjct: 281 IIRGGNTDVYVMNLRTRQLSRLTSDPGIDTSPSFSPDASRIVFNSDRTGTPRLYVMNADG 340

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           S+Q+ IS+    SY  P WSP+GDLIAFTK  G +F IGVM  DGS ER+L      + P
Sbjct: 341 SNQRPISRGG-GSYTAPAWSPRGDLIAFTKSGGGQFGIGVMATDGSGERMLSRSYFEEGP 399

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           +W+P+GR L+FSR+  G   + L+ +DL+GR           SDP W   +D
Sbjct: 400 SWAPNGRYLMFSRQTRGGN-TNLWMVDLSGRVIAQSGYQGRGSDPAWSPLLD 450


>gi|126733593|ref|ZP_01749340.1| translocation protein TolB precursor [Roseobacter sp. CCS2]
 gi|126716459|gb|EBA13323.1| translocation protein TolB precursor [Roseobacter sp. CCS2]
          Length = 438

 Score =  276 bits (705), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 157/408 (38%), Positives = 237/408 (58%), Gaps = 22/408 (5%)

Query: 47  PVSIAFTKF----VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P++ A   F     +  +    +S +V +DL  + +F  +   +F  ++++      F D
Sbjct: 36  PITFAVPSFEAESPAAQQAASDISRLVVQDLAGTGLFREVPATAFISQVSSFVQPVAFPD 95

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDD 161
           W ++ AQ L+ G V   G ++L V+FRL+DV   +++  G +F  +   WR++ H +SD 
Sbjct: 96  WRAINAQALIVGAVNVNG-NQLSVKFRLYDVFSGQELGQGLQFAGTVDGWRRMGHKVSDA 154

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +Y  ITGE G F+SR++FVSES      +  L +MD DGAN+++LT S   I+  PRFSP
Sbjct: 155 VYSRITGEGGYFDSRVVFVSESGPKDNRQKRLAIMDFDGANVQFLTDS-SSIVLAPRFSP 213

Query: 222 NQQKVAYATYDDEDILRVYLMDT------RIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           N  +V Y +++     R+ +++       ++  AP        M  +PRFS +G++ + S
Sbjct: 214 NGDRVLYTSFE-SGFPRINVLNVANVGRQQLQTAPGE------MAFSPRFSRDGRQVIYS 266

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +      DIY  DL +    RLT+   I  + S SPD SQIVFESDR G +QLYVM +NG
Sbjct: 267 LSNGGNTDIYRTDLSTGQHVRLTSAPSIETAPSLSPDGSQIVFESDRSGNQQLYVMSANG 326

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            + +RIS   +  Y  PVWSP+GDL+AFTK +  +F IGVM+ DGS+ERLL      + P
Sbjct: 327 GEARRIS-FGQGRYGTPVWSPRGDLVAFTKQNAGRFHIGVMRIDGSEERLLTSSFLDEGP 385

Query: 396 TWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
           TWSP+GR ++FSR+  G  G S +YS+D++GRN   +     ASDP W
Sbjct: 386 TWSPNGRVIMFSRETQGAGGTSSMYSVDISGRNLKAVPLQGGASDPSW 433


>gi|189184452|ref|YP_001938237.1| TolB protein precursor [Orientia tsutsugamushi str. Ikeda]
 gi|226705887|sp|B3CUF6|TOLB_ORITI RecName: Full=Protein tolB; Flags: Precursor
 gi|189181223|dbj|BAG41003.1| TolB protein precursor [Orientia tsutsugamushi str. Ikeda]
          Length = 453

 Score =  275 bits (704), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 151/424 (35%), Positives = 235/424 (55%), Gaps = 13/424 (3%)

Query: 27  FFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG--GKVSEVVSKDLQRSDVFNLISQ 84
           F  T+  + +K+   +    P++I F    S +E G    +  ++S DL  S +F  IS 
Sbjct: 30  FANTTTLSPIKITKGNCTQIPIAINFFAAKSNEEHGLSQNIVSIISNDLNISKIFAPISS 89

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
           D F +       IP F  W+ + A +L+ G + K      +V F +WDV   K+I  K F
Sbjct: 90  DLFIETEQGVAHIPLFTAWSQINANILINGEITKIDSTDFKVTFVVWDVFSAKEITRKSF 149

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
                 WR  AH I+D IY+ +TG KG+FN++I++VSES  S      + +MD+DGAN  
Sbjct: 150 TFPSQLWRSTAHKIADQIYKHVTGSKGNFNTKIVYVSESNSSKGKIRRIAIMDQDGANHN 209

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           Y+T  ++ ++  P FSPN  ++ Y +Y ++   +R++ +++  +   K + +F  +  +P
Sbjct: 210 YITNGKNHVI-TPVFSPNNNQILYVSYHNKIPTVRIHDLNSGNN---KILASFNGITFSP 265

Query: 264 RFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RFS +G + L+S         IY ++L +   ++LT    IN S SYSPD S+I F SDR
Sbjct: 266 RFSPDGNKILVSNSSTKNVTHIYEINLLTGKIKQLTKGQSINTSPSYSPDGSKIAFVSDR 325

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G  Q+Y+M   G + KR++  +  +Y  P WSP  + IAFTK    +F+IGV+K DGS 
Sbjct: 326 SGSTQIYIMNDQGGNIKRLT-SQPGAYTTPAWSPTNNYIAFTKIEAGEFSIGVIKLDGSN 384

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +R++     ++ P+W+P G+++IFSR     K   T  KLYS+D  G NE  I TP  AS
Sbjct: 385 KRIIATKHLVEGPSWAPDGKTIIFSRAYKATKSTSTKVKLYSVDCTGYNEREIQTPENAS 444

Query: 439 DPQW 442
           DP W
Sbjct: 445 DPNW 448


>gi|330991878|ref|ZP_08315827.1| Protein tolB [Gluconacetobacter sp. SXCC-1]
 gi|329760899|gb|EGG77394.1| Protein tolB [Gluconacetobacter sp. SXCC-1]
          Length = 456

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 153/410 (37%), Positives = 235/410 (57%), Gaps = 20/410 (4%)

Query: 38  VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI 97
           +  + A  +P+ I      S   +  +V++V+S DL    +F  IS        + P   
Sbjct: 57  ITVDQARTAPIPIVLPSLGS--GVAQQVTDVISADLGNCGLFRPISA-------SMPQGT 107

Query: 98  PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHT 157
           P F  + S+GA+  VTG+V+++G   LRVEFRLWDV   KQI G  + ++   WR+IAH 
Sbjct: 108 PDFASYKSMGARAAVTGKVVEQGSS-LRVEFRLWDVLVGKQIQGTAYTAAAQDWRRIAHV 166

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           I+D IY  + GE+G FN+RI +++ S         L +MD+DGA+ RYLT +   +   P
Sbjct: 167 IADVIYNRMLGEQGYFNTRIAYIARSGPRAHQTTRLAIMDQDGADSRYLT-NGQWLTLTP 225

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           RF+P   ++A+ +Y +    RVYL +    +  + +G+F  +  APRF+ +G+  ++SV 
Sbjct: 226 RFNPANSELAFMSYANYRP-RVYLFNLNTGQQ-RLLGDFSGISFAPRFAPDGRSVILSVT 283

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +    DIY VDL + +  +LT +  I+ S S+SPD SQIVF SDR G  QLY+M ++G D
Sbjct: 284 RGGGSDIYLVDLANMSRRQLTASGAIDTSPSFSPDGSQIVFNSDRGGSPQLYIMSASGGD 343

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            KRIS      Y  PVWSP+GDLIAF++ +   F++GVM  DG+ ER+L +   +++P +
Sbjct: 344 AKRISYG-HGQYGSPVWSPRGDLIAFSRIANGSFSLGVMAPDGTGERILTQGFTVESPAF 402

Query: 398 SPSGRSLIFSRK-----KDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            P+GR L F R+           + + +ID+ G +E  +     ASDP W
Sbjct: 403 CPNGRVLAFCRQSAAGSGGAGFATGISTIDITGFHERALPA-GSASDPTW 451


>gi|258543663|ref|YP_003189096.1| translocation protein TolB [Acetobacter pasteurianus IFO 3283-01]
 gi|256634741|dbj|BAI00717.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256637797|dbj|BAI03766.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256640851|dbj|BAI06813.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256643906|dbj|BAI09861.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256646961|dbj|BAI12909.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256650014|dbj|BAI15955.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256653004|dbj|BAI18938.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256656058|dbj|BAI21985.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 454

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 155/411 (37%), Positives = 239/411 (58%), Gaps = 19/411 (4%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
           ++  + A  +P+ I    F     LG K++EV++ DL  + +F ++   +          
Sbjct: 53  EITVDQARTAPIPIIIPNFGG--GLGEKIAEVLTNDLNNTGLFKVMPGSTTS-------G 103

Query: 97  IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            P F    S+GA   VTG V       +RVE RLWDV   +QI G  + +S A+WR+IAH
Sbjct: 104 TPDFVTSKSMGAHAQVTGSVSGG-GSSVRVEMRLWDVLSHQQIQGTAYTTSAANWRRIAH 162

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            + D IY+ + GEKG F++RI F+S S   G  +  L VMD+DGAN R LT  +  +   
Sbjct: 163 IVGDVIYERMLGEKGYFDTRIAFISRSGPRGHQRTRLAVMDQDGANARMLTTGK-WLTLT 221

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PRFSP + ++A+ +Y +    RVYL D    R  + +G F  +  APRFS +G+  ++SV
Sbjct: 222 PRFSPVKDQIAFMSYANNR-PRVYLFDLTSGRQ-QILGEFEGISFAPRFSPDGRSVVLSV 279

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            ++   D+Y VDL S +  ++T++  I+ S  +SPD SQIVF SDR G  Q+Y+M ++G 
Sbjct: 280 TRNGGSDLYIVDLASGSRRQITSSGAIDTSPCFSPDGSQIVFNSDRGGSPQIYIMPASGG 339

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             +RIS   + +Y  PVWSP+GDLIAFT+ +G  F++GVM  DG+ ER++ +   +++P+
Sbjct: 340 GARRISYG-QGTYGSPVWSPRGDLIAFTRIAGGMFSLGVMAPDGTGERIMTQGFTVESPS 398

Query: 397 WSPSGRSLIFSRKKDGDTG-----SKLYSIDLNGRNETLINTPAYASDPQW 442
           + P+GR L + R+     G     S +  +D+ G N+ ++ TP  ASDP W
Sbjct: 399 FCPNGRVLAYCRQSRAGAGGAGFNSTIGMVDITGFNDRVLPTPEAASDPAW 449


>gi|254294750|ref|YP_003060773.1| Tol-Pal system beta propeller repeat protein TolB [Hirschia baltica
           ATCC 49814]
 gi|254043281|gb|ACT60076.1| Tol-Pal system beta propeller repeat protein TolB [Hirschia baltica
           ATCC 49814]
          Length = 454

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 161/398 (40%), Positives = 231/398 (58%), Gaps = 19/398 (4%)

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           +G  +++V+  DL  S +F +IS D+F +K  +   +P F DW  + A  L+ G+ I + 
Sbjct: 55  VGSDIAQVIRNDLAGSGLFRMISPDAFVEKNLDIAVLPTFADWKVINADALLVGKTIIDP 114

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
              +  +FRL+DV   KQ+  +++  SS  SWR++AH I+DDIY+ +T + G F+SRI++
Sbjct: 115 TGSMATQFRLFDVFTGKQLYSQEYTVSSRDSWRRMAHIIADDIYEQLTPDSGYFDSRIVY 174

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--DDEDIL 237
           + ES         L +MD+DGAN   LT  R ++   PRF P+ Q + Y     D  + L
Sbjct: 175 IDESGPKTKRVRRLAIMDQDGANPENLTDGRIEVQ-TPRFDPSSQTIIYTALVPDARNPL 233

Query: 238 ----RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               RVYL D    R  + IG++     A RF+ +G    +S+ +D   DIY +DL    
Sbjct: 234 LERRRVYLFDIETGRQ-EVIGDYGLTSFAARFAPDGNSVAMSLAEDGNSDIYILDLARRQ 292

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-------- 345
             RLTN L I+ S SYSPD  +IVF SDR G  QLY+M ++GSD+   +  +        
Sbjct: 293 RTRLTNNLAIDTSPSYSPDGKEIVFTSDRGGSPQLYIMNADGSDRNCENGPRNKVCRITF 352

Query: 346 -EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + SY  PVWSP+GDLIAFTK S  +F IGV+K DG+ ER L  D  ++ PTWSP+GR +
Sbjct: 353 GQGSYSTPVWSPRGDLIAFTKQSKGRFEIGVIKTDGTGERSLTSDYLVEGPTWSPNGRVI 412

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           IF ++  G   S L+SIDL+GRN   + T   ASDP W
Sbjct: 413 IFFKEARGGRPS-LWSIDLSGRNLKRVPTRGDASDPAW 449


>gi|148284009|ref|YP_001248099.1| protein precursor [Orientia tsutsugamushi str. Boryong]
 gi|226705886|sp|A5CBX4|TOLB_ORITB RecName: Full=Protein tolB; Flags: Precursor
 gi|146739448|emb|CAM79084.1| protein precursor [Orientia tsutsugamushi str. Boryong]
          Length = 453

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 148/415 (35%), Positives = 230/415 (55%), Gaps = 13/415 (3%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDE--LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
           +K+   +    P++I F    S +E  L   +  ++S DL  S +F  IS D F +    
Sbjct: 39  IKITKGNCTQIPIAINFFSAKSNEEHDLSQNIVSIISNDLNISKIFAPISSDLFIETEQG 98

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
              IP F  W+ + A +L+ G + K      +V F +WDV   K+I  K F      WR 
Sbjct: 99  VAHIPLFTAWSQINANILINGEITKIDSTDFKVTFVIWDVFSAKEITRKSFTFPSQLWRS 158

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            AH I+D IY+ +TG KG+FN++I++VSES  S      + +MD+DGAN  Y+T  ++ +
Sbjct: 159 TAHKIADQIYKHVTGSKGNFNTKIVYVSESNSSNRKIRRIAIMDQDGANHNYITNGKNHV 218

Query: 214 LFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +  P FSP   ++ Y +Y ++   +R++ +++  +   K + +F  +  +PRFS +G + 
Sbjct: 219 I-TPVFSPKNNQILYVSYHNKIPTVRIHDLNSGNN---KILASFNGITFSPRFSPDGNKI 274

Query: 273 LIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           L+S         IY ++L +   ++LT    IN S SYSPD S+I F SDR G  Q+Y+M
Sbjct: 275 LVSNSSTKNVTHIYEINLLTGKIKQLTKGQSINTSPSYSPDGSKIAFVSDRSGSTQIYIM 334

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              G + KR++  +  +Y  P WSP  + IAFTK    +F+IGV+K DGS +R++     
Sbjct: 335 NDQGGNIKRLTS-QPGAYTTPAWSPTNNYIAFTKIEAGEFSIGVIKLDGSNKRIIATKYL 393

Query: 392 LQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           ++ P+W+P G+++IFSR     K   T  KLYS+D  G NE  I TP  ASDP W
Sbjct: 394 VEGPSWAPDGKTIIFSRAYKATKSTSTKVKLYSVDYTGYNEREIQTPENASDPNW 448


>gi|157803974|ref|YP_001492523.1| translocation protein TolB [Rickettsia canadensis str. McKiel]
 gi|166229988|sp|A8EZF5|TOLB_RICCK RecName: Full=Protein tolB; Flags: Precursor
 gi|157785237|gb|ABV73738.1| hypothetical protein A1E_04055 [Rickettsia canadensis str. McKiel]
          Length = 444

 Score =  269 bits (687), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 163/444 (36%), Positives = 249/444 (56%), Gaps = 24/444 (5%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSK 71
           N+   ++L+   F  + +A   +        P  IA  KF     + + +G  V +V+S 
Sbjct: 3   NIIYFILLL---FSCTGYALETINIECGRADPTPIAVNKFDADTSTNNIVGHDVVKVISN 59

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S +F+ IS  SF +  T  +  P F  W  + A +LV G V K    +L++ F LW
Sbjct: 60  DLKLSGLFHPISSASFIEDKTGIEDKPLFAAWRQINASLLVNGEVKKLESGKLKISFILW 119

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           D    KQ++G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK 
Sbjct: 120 DTLLEKQLVGEILEVPENLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIKR 179

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +MD DGAN +YLT     +L  PRF+ +  K+ Y +Y  +    +Y  D +  +   
Sbjct: 180 -IALMDYDGANNKYLTNGTSLVL-TPRFARSVDKIFYVSYATKRRALIYEKDLKTGKE-S 236

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            + +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSP
Sbjct: 237 IVSDFAGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKQLHKLTDGFGINTSPSYSP 296

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GE- 369
           D  +IV+ SDR G  QLY+M S+GS+ KRIS     SY  P WSP+GD IAFTK + GE 
Sbjct: 297 DGKKIVYNSDRNGVPQLYIMNSDGSNVKRISFGG-GSYAAPSWSPRGDYIAFTKITRGED 355

Query: 370 ---KFAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKL 418
               F IG+MK     D + ER++     +++P WSP+GR ++F++    +      +K+
Sbjct: 356 GSKTFNIGIMKAYPQDDENSERIITSGYLVESPCWSPNGRVIMFAKGWPSRAKVPGKNKI 415

Query: 419 YSIDLNGRNETLINTPAYASDPQW 442
           ++IDL G NE  I TP  ASDP+W
Sbjct: 416 FAIDLTGHNEREIITPEDASDPEW 439


>gi|209543380|ref|YP_002275609.1| translocation protein TolB [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531057|gb|ACI50994.1| Tol-Pal system beta propeller repeat protein TolB
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 462

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 153/411 (37%), Positives = 229/411 (55%), Gaps = 20/411 (4%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
           ++  + A  +P+ I         + G  VS V+S DL    +F  IS        + P  
Sbjct: 62  EITVDQARTAPIPIVIPALGG--DAGALVSSVISGDLGNCGLFAPISG-------SLPVG 112

Query: 97  IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
           +P F  + SLGA+ LV+G         LRVEFRLWDV   +QI G  + +     RKIAH
Sbjct: 113 VPDFGTYKSLGARALVSGSATTG-GGGLRVEFRLWDVLTGQQIQGTAYTAGAGDARKIAH 171

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            I+D IY+ + GEKG FN+RI +++ S         L +MD+DGAN  YL+  +  +   
Sbjct: 172 IIADVIYERLLGEKGYFNTRIAYIARSGPRAHQTTRLAIMDQDGANSHYLSGGQ-WLTLT 230

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PRFSP   ++A+ +Y +    RVY+++    R  + +G+F  +  APRF+ +G+  ++S 
Sbjct: 231 PRFSPTSDQLAFMSYANNRP-RVYMLNLATGRQ-QLLGDFEGISFAPRFAPDGRAVILSA 288

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +    DIYSVDL + A  ++T++  I+ S  YSPD SQIVF SDR G  QLY+M + G 
Sbjct: 289 TRGAGSDIYSVDLVTRAKRQITSSGAIDTSPCYSPDGSQIVFNSDRGGSPQLYIMSAGGG 348

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           D +RIS      Y  PVWSP+GDLIAFT+ +   F++GVM  DG+ ER++ +   +++PT
Sbjct: 349 DARRISYGNGV-YGSPVWSPRGDLIAFTRIANGSFSLGVMAPDGTGERIMTQGFTVESPT 407

Query: 397 WSPSGRSLIFSRKKDGDT-----GSKLYSIDLNGRNETLINTPAYASDPQW 442
           + P+GR + F R+           S + ++D+ G +E  I     ASDP W
Sbjct: 408 FCPNGRVIAFCRQTAAGAGGAGFSSGISTVDITGFHERAIPA-GGASDPAW 457


>gi|162146628|ref|YP_001601087.1| translocation protein TolB [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785203|emb|CAP54749.1| protein tolB precursor [Gluconacetobacter diazotrophicus PAl 5]
          Length = 462

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 153/411 (37%), Positives = 230/411 (55%), Gaps = 20/411 (4%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
           ++  + A  +P+ I         + G  VS V+S DL    +F+ IS        + P  
Sbjct: 62  EITVDQARTAPIPIVIPALGG--DAGALVSSVISGDLGNCGLFSPISG-------SLPVG 112

Query: 97  IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
           +P F  + SLGA+ LV+G         LRVEFRLWDV   +QI G  + +     RKIAH
Sbjct: 113 VPDFGTYKSLGARALVSGSATTG-GGGLRVEFRLWDVLTGQQIQGTAYTAGAGDARKIAH 171

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            I+D IY+ + GEKG FN+RI +++ S         L +MD+DGAN  YL+  +  +   
Sbjct: 172 IIADVIYERLLGEKGYFNTRIAYIARSGPREHQTTRLAIMDQDGANSHYLSGGQ-WLTLT 230

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PRFSP   ++A+ +Y +    RVY+++    R  + +G+F  +  APRF+ +G+  ++S 
Sbjct: 231 PRFSPTSDQLAFMSYANNRP-RVYMLNLATGRQ-QLLGDFEGISFAPRFAPDGRAVILSA 288

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +    DIYSVDL + A  ++T++  I+ S  YSPD SQIVF SDR G  QLY+M + G 
Sbjct: 289 TRGAGSDIYSVDLVTRAKRQITSSGAIDTSPCYSPDGSQIVFNSDRGGSPQLYIMSAGGG 348

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           D +RIS      Y  PVWSP+GDLIAFT+ +   F++GVM  DG+ ER++ +   +++PT
Sbjct: 349 DARRISYGNGV-YGSPVWSPRGDLIAFTRIANGSFSLGVMAPDGTGERIMTQGFTVESPT 407

Query: 397 WSPSGRSLIFSRKKDGDT-----GSKLYSIDLNGRNETLINTPAYASDPQW 442
           + P+GR + F R+           S + ++D+ G +E  I     ASDP W
Sbjct: 408 FCPNGRVIAFCRQTAAGAGGAGFSSGISTVDITGFHERAIPA-GGASDPAW 457


>gi|329848730|ref|ZP_08263758.1| tol-Pal system beta propeller repeat protein TolB [Asticcacaulis
           biprosthecum C19]
 gi|328843793|gb|EGF93362.1| tol-Pal system beta propeller repeat protein TolB [Asticcacaulis
           biprosthecum C19]
          Length = 449

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 153/426 (35%), Positives = 235/426 (55%), Gaps = 8/426 (1%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFT---KFVSIDELGGKVSEVVSKDLQRSD 77
           L  + G         ++   + A+  P++IA        S + +G ++++VV  DLQ S 
Sbjct: 23  LTAMAGSVAAQSQGPLRGTVDEADVQPLAIAIMISGTDPSGNTIGEQLTKVVINDLQSSG 82

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F  I   +F +   + +S P +++W ++ AQ L  GR       +++ + R+WD+  +K
Sbjct: 83  YFAPIDPRAFIETSLDVNSPPTWENWTAINAQFLANGRAYINANGQVQADVRVWDIYSQK 142

Query: 138 QII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +   G     +P  WR++AH  +D IY+ +TGEKG F++RI FV+ES   G     L +M
Sbjct: 143 EAFPGAGHMITPEQWRRLAHKHADAIYERLTGEKGYFDTRIAFVAESGKRGDRVKRLAMM 202

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DGAN +YL       +  PRFS +  ++AY      D  R++L D    R  +++   
Sbjct: 203 DQDGANPQYLAVEGSGKIITPRFSADGTEIAYMAL-SADSARIFLYDLEARRG-EQVAQV 260

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           R M  APR+S +G +   SV +    DIY  +L + +  RLT+   I+ S S+S D S+I
Sbjct: 261 RGMAFAPRYSPDGTKLAFSVSQGANSDIYVTNLNTRSLSRLTSDPAIDTSPSFSADGSRI 320

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            F SDR G  Q+YVM ++GS  +RI+      Y  PV+SP+GDLIAFTK S  +F+IGVM
Sbjct: 321 AFTSDRGGSPQIYVMGADGSGARRITFGG-GLYSTPVFSPKGDLIAFTKQSKGRFSIGVM 379

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             DGS ERLL      + PTW+P+GR ++F R+  G   S L+ +++NGR E  +     
Sbjct: 380 NPDGSGERLLTSSYLEEGPTWAPNGRYIMFFREPPGGMPS-LWMVEVNGRIERPVPYTGG 438

Query: 437 ASDPQW 442
           ASDP W
Sbjct: 439 ASDPAW 444


>gi|94496181|ref|ZP_01302759.1| TolB-like protein [Sphingomonas sp. SKA58]
 gi|94424360|gb|EAT09383.1| TolB-like protein [Sphingomonas sp. SKA58]
          Length = 444

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 155/395 (39%), Positives = 225/395 (56%), Gaps = 11/395 (2%)

Query: 51  AFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD-SIPRFQDWNSLGAQ 109
           A T   S  +LG K++EV++ DL+ S +F+  S  S    I  P+ + P++Q W +   Q
Sbjct: 53  ADTPAGSASDLGRKIAEVIASDLKSSGLFD-PSGPSGLPAIPFPEVTFPQYQKWGAY--Q 109

Query: 110 VLVTGRVIKEGKDR-LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            LV G V   G +  + V   L+DV  ++++  + +  +P  WR+ AH  +D IY  ++G
Sbjct: 110 ALVQGFVRTSGGEADITVGCYLYDVALQQELTRQGYVVAPRDWRRAAHKCADAIYARLSG 169

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E   F+SRI +++ES   G     L +MD DGAN R++T +   I   PRFSP+ + + Y
Sbjct: 170 ESPFFDSRIAYIAESGPKGNRTKRLAIMDSDGANHRFIT-NGQSIALTPRFSPDYKSIVY 228

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            +Y    + R+Y+ D    +  + +    +   APR+S +G+  L S+      DIY V 
Sbjct: 229 VSYLGSRV-RLYVYDIGTGQQ-RLVTESNNPTFAPRWSPDGRNILFSMAVAGNTDIYRVS 286

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
               +  RLTN+  I++  SYSPD S+IVFESDR G +QLYVM ++GS+Q+RIS      
Sbjct: 287 ANGGSPVRLTNSPGIDVGGSYSPDGSRIVFESDRSGGQQLYVMNADGSNQRRISHGG-GR 345

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           Y  P WSP+GDLIAFTK SG+ F I VM  +G  ER+L      + PTWSP+GR L F R
Sbjct: 346 YATPEWSPRGDLIAFTKLSGD-FKIAVMSPNGDNERILTNGWQDEQPTWSPNGRVLQFFR 404

Query: 409 KKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
              G  G S+++ +DL G NE  I TP   SDP W
Sbjct: 405 TTPGRQGTSQVWQVDLTGVNERRIPTPLSGSDPAW 439


>gi|119383438|ref|YP_914494.1| translocation protein TolB [Paracoccus denitrificans PD1222]
 gi|119373205|gb|ABL68798.1| TolB, N-terminal domain protein [Paracoccus denitrificans PD1222]
          Length = 461

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 150/405 (37%), Positives = 236/405 (58%), Gaps = 16/405 (3%)

Query: 47  PVSIAFTKFVSIDELGG-----KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ 101
           P+  A  +F   DE G      +V  +++ DL  + +F  I   +   +  + ++   ++
Sbjct: 59  PMPFAIARFH--DEGGAGEYLAQVQNLIAADLTGTGLFREIPASAHIARPESFEAPVSYE 116

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISD 160
           DW ++ AQ L+TG V  +   ++ V+FRL+DV   + +  G +F +S  +WR+ AH  +D
Sbjct: 117 DWKAINAQALITGSVKVQ-GGKVVVKFRLFDVFAGQPLGDGMQFDASTGNWRRAAHKAAD 175

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            +Y  +TGE   F+SR+ FV E+      +  + +MD DGAN+++LT     ++ +PRFS
Sbjct: 176 QVYSRLTGEGPYFDSRVAFVQETGPKDARRKRIGIMDYDGANVKWLT-DDSTLVLKPRFS 234

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--SMILAPRFSSNGKRALISVQK 278
           P+  ++ Y +Y      +  +MD     A +++G  +  +M  +PRFS +G+  + S+++
Sbjct: 235 PDGSRLLYTSYA-TGFPQAMMMDVN-SLAARQLGAGQQGTMSFSPRFSPDGRWIVYSLEQ 292

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   DIY +D  + A   LTN   I  S SYSPD  QIVFESDR G  QLYVM +NG + 
Sbjct: 293 NGNTDIYQMDAATGAQRALTNAPSIETSPSYSPDGKQIVFESDRSGTPQLYVMGANGGEP 352

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           +RIS   E  Y  PVWSP+GD+IAFT+  G KF IGVM+ DGS+E++L E    + PTW+
Sbjct: 353 RRISF-GEGRYGTPVWSPRGDMIAFTRQVGGKFHIGVMRTDGSEEKMLTESFLDEGPTWA 411

Query: 399 PSGRSLIFSR-KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           P+GR ++F+R    GD   +L+S+D+ GRN   +     ASDP W
Sbjct: 412 PNGRVVMFTRVTPGGDGQPRLHSVDITGRNMRPVKINGAASDPDW 456


>gi|103485823|ref|YP_615384.1| translocation protein TolB [Sphingopyxis alaskensis RB2256]
 gi|118574599|sp|Q1GWC1|TOLB_SPHAL RecName: Full=Protein tolB; Flags: Precursor
 gi|98975900|gb|ABF52051.1| TolB-like protein [Sphingopyxis alaskensis RB2256]
          Length = 454

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 146/400 (36%), Positives = 217/400 (54%), Gaps = 5/400 (1%)

Query: 44  NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW 103
           +++  S+     +  D LG ++++V++ DL+RS +F  I  +  +         PRF +W
Sbjct: 54  SFATASVQTVAGLRTDALGRQLADVIAADLERSGLFEPIGPNGVRAIGRAEVQAPRFGEW 113

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            + GA+ +V G V       L V   L+D     +++ K F   PA WR+ AH  +D IY
Sbjct: 114 QARGAENVVHGFVDAGSNGSLIVGCYLYDTALGSELVRKGFEIQPADWRRAAHKCADAIY 173

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
             ++GE   F+SR+ +++ES   G     L +MD DG N R++T +   +   PRFSP+ 
Sbjct: 174 SRLSGEAPFFDSRVAYIAESGPKGNRIKRLAIMDSDGGNHRFIT-NGQALALSPRFSPDY 232

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +K+ Y +Y + D +RV++ D       + +   R+   APR+S +G + L S+      D
Sbjct: 233 KKIVYVSYLN-DRVRVFIYDV-ASGTQRLVTESRNPTFAPRWSPDGTQILYSMAVGGNTD 290

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           IY +        RLT    I++  S+SPD  +IVFESDR G +QLYVM  +GS+Q+RIS 
Sbjct: 291 IYRISANGGTPVRLTTAPGIDVGGSFSPDGRKIVFESDRSGSQQLYVMNIDGSNQQRISF 350

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                Y  P WSP+GDLIAFT+  G +F IGVM   G   R+L      +APTWSP+GR 
Sbjct: 351 GG-GRYATPEWSPRGDLIAFTRMGGGEFRIGVMTPSGGGVRMLTNGWQDEAPTWSPNGRV 409

Query: 404 LIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
           + F R   G  G S L+ +DL G N   + TP   SDP W
Sbjct: 410 IQFFRTTPGREGRSSLWQVDLTGVNLRRLPTPQDGSDPSW 449


>gi|294013406|ref|YP_003546866.1| TolB protein [Sphingobium japonicum UT26S]
 gi|292676736|dbj|BAI98254.1| TolB protein [Sphingobium japonicum UT26S]
          Length = 417

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 151/393 (38%), Positives = 218/393 (55%), Gaps = 11/393 (2%)

Query: 53  TKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD-SIPRFQDWNSLGAQVL 111
           T   S  ELG K++EV++ DL+ S +F+    +     I  P+ + P +  W +   Q L
Sbjct: 28  TPAGSSTELGRKIAEVIASDLKGSGLFDPSGPNGIP-TIAFPEVTSPAYDKWGAY--QAL 84

Query: 112 VTGRVIKEGKDR-LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           V G V   G +  + V   L+DV  ++++  + +  SP  WR+ AH  +D IY  ++GE 
Sbjct: 85  VQGFVRTTGGEADITVGCYLYDVALKQELTRQGYVVSPRDWRRAAHKCADAIYARLSGES 144

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             F+SRI +++ES   G     L +MD DGAN R++T +   I   PRFSP+ + + Y +
Sbjct: 145 PFFDSRIAYIAESGPKGNRTKRLAIMDSDGANHRFIT-NGQSIALTPRFSPDYKSIVYVS 203

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           Y +  + R+Y+ D    +  + +    +   APR+S +G+  L S+      DIY V   
Sbjct: 204 YLNNRV-RIYVYDIGTGKQ-RLVTESSNATFAPRWSPDGRSILFSMAIAGNTDIYRVSAT 261

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             A +RLT    I++  SYSPD  QIVFESDR G +Q+YVM ++GS Q+RIS      Y 
Sbjct: 262 GGAPQRLTTAPGIDVGGSYSPDGRQIVFESDRSGSQQIYVMNADGSGQRRISHGG-GRYA 320

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            P WSP+GDLIAFTK SG+ F I VM   G  ER+L      + P+WSP+GR L F R  
Sbjct: 321 TPEWSPRGDLIAFTKISGD-FKIAVMTPSGDNERILTNGWQDEQPSWSPNGRVLQFFRTT 379

Query: 411 DGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
            G  G S+++ +DL G NE  I TP   SDP W
Sbjct: 380 PGREGSSQVWQVDLTGVNERRIPTPLSGSDPAW 412


>gi|307294753|ref|ZP_07574595.1| Tol-Pal system beta propeller repeat protein TolB [Sphingobium
           chlorophenolicum L-1]
 gi|306879227|gb|EFN10445.1| Tol-Pal system beta propeller repeat protein TolB [Sphingobium
           chlorophenolicum L-1]
          Length = 449

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 150/393 (38%), Positives = 218/393 (55%), Gaps = 11/393 (2%)

Query: 53  TKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD-SIPRFQDWNSLGAQVL 111
           T   S  ELG K++EV++ DL+ S +F+    +     I  P+ + P +  W +   Q L
Sbjct: 60  TPAGSSTELGRKIAEVIASDLKGSGLFDPSGPNGIP-TIAFPEVTSPAYDKWGAY--QAL 116

Query: 112 VTGRVIKEGKDR-LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           V G V   G +  + V   L+DV  ++++  + +  SP  WR+ AH  +D IY  ++GE 
Sbjct: 117 VQGFVRTTGGEADITVGCYLYDVALKQELTRQGYVVSPRDWRRAAHKCADAIYARLSGES 176

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             F+SRI +++ES   G     L +MD DGAN R++T +   I   PRFSP+ + + Y +
Sbjct: 177 PFFDSRIAYIAESGPKGNRTKRLAIMDSDGANHRFIT-NGQSIALTPRFSPDYKSIVYVS 235

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           Y +  + R+Y+ D    +  + +    +   APR+S +G+  L S+      D+Y V   
Sbjct: 236 YLNNRV-RIYIYDIGTGKQ-RLVTESNNATFAPRWSPDGRNILFSMAVAGNTDVYRVSAT 293

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             A +RLT    I++  SYSPD  QIVFESDR G +Q+YVM ++GS Q+RIS      Y 
Sbjct: 294 GGAPQRLTTAPGIDVGGSYSPDGRQIVFESDRSGSQQVYVMNADGSGQRRISHGG-GRYA 352

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            P WSP+GDLIAFTK SG+ F I VM   G  ER+L      + P+WSP+GR L F R  
Sbjct: 353 TPEWSPRGDLIAFTKISGD-FKIAVMTPSGDNERILTNGWQDEQPSWSPNGRVLQFFRTT 411

Query: 411 DGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
            G  G S+++ +DL G NE  I TP   SDP W
Sbjct: 412 PGREGSSQVWQVDLTGVNERRIPTPLSGSDPAW 444


>gi|85710724|ref|ZP_01041788.1| translocation protein TolB precursor [Erythrobacter sp. NAP1]
 gi|85687902|gb|EAQ27907.1| translocation protein TolB precursor [Erythrobacter sp. NAP1]
          Length = 473

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 155/411 (37%), Positives = 226/411 (54%), Gaps = 14/411 (3%)

Query: 34  AFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
           A    AT+S   +P +   T       LG +++ V++ +L+ + +F     DS  +    
Sbjct: 70  AIPSFATDSNRPTPANSDGTA-----ALGREIARVITANLRNNGLFKPTGPDSLPEPRFQ 124

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
             + P +  W   GA++LV G V   G DRL V   L+DV  + ++I + +   PA WR+
Sbjct: 125 QITAPSWSSWTGRGAEMLVHGYVRARGDDRLVVGCYLYDVALQDELIREGWVVRPADWRR 184

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            AH  SD IY  +TGE   F+SRI +++E+         L VMD DGAN R+LT      
Sbjct: 185 AAHKCSDLIYARLTGESPFFDSRIAYIAETGPKDNRVKRLAVMDSDGANHRFLTLGSATA 244

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           L  PR+SP+  K+ Y +Y D +  R+Y+ D    +      N ++  LAPR+S +G+  L
Sbjct: 245 L-TPRYSPDYSKILYLSYVDGNP-RIYVYDIGSGQQTLVTEN-QNPTLAPRWSPDGRHIL 301

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            S+      DIY V +    +ERLT+T  I+I  SYSPD  +IVFESDR G +Q YVM +
Sbjct: 302 YSMAVAGNTDIYRVPVTGGRSERLTDTPGIDIGGSYSPDGRRIVFESDRSGTQQCYVMDA 361

Query: 334 NGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           +GS+Q+RI+    + A+   P WSP+GD IAFT+ +G+ F + VM   G   R+L     
Sbjct: 362 DGSNQRRITFFGGRCAT---PEWSPRGDQIAFTRIAGD-FNVAVMTPSGGSLRVLTNGWQ 417

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +APTW+P+GR + F R       S L+ +DL GRNE  + TP  ASDP W
Sbjct: 418 DEAPTWAPNGRIIQFFRTTRDAGRSSLWQVDLTGRNERRLPTPVDASDPAW 468


>gi|58040119|ref|YP_192083.1| translocation protein TolB [Gluconobacter oxydans 621H]
 gi|67461870|sp|Q5FQB9|TOLB_GLUOX RecName: Full=Protein tolB; Flags: Precursor
 gi|58002533|gb|AAW61427.1| TolB protein [Gluconobacter oxydans 621H]
          Length = 453

 Score =  248 bits (634), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 156/435 (35%), Positives = 230/435 (52%), Gaps = 31/435 (7%)

Query: 25  GGFFPTSIHAFVK-----------VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
           GG   T + AF +           +  + A   P+ I    F +   LG ++S V++ DL
Sbjct: 28  GGLLATPLAAFAQSGAASGPGEAEITVDQARQEPIPIVVPNFGA--GLGEQISGVITSDL 85

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
             + +F ++S          P S P F    + GA+  V       G   +RVE RLWDV
Sbjct: 86  NGTGLFKVMSGS------VPPGSTPDFSALKAQGARAAVA--GQAVGAGSVRVEMRLWDV 137

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
              +Q+ G  + +S ++WR+IAH I+D IY+ + GEKG F++RI +++ +         L
Sbjct: 138 LSGQQLQGTAYTASNSNWRRIAHIIADVIYERMLGEKGYFDTRIAYIARTGPRHHQITRL 197

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD+DGAN R LT   + +   PRF+P + ++A+ +Y + +  RVYL D    R  + +
Sbjct: 198 ALMDQDGANERMLT-GGEWLTLTPRFNPVRDQIAFMSYAN-NRPRVYLFDLASGRQ-QIL 254

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPD 312
           G F  +  APRFS  G   ++S  +    DI+ VDL S A  ++TN+   I+ S  +SPD
Sbjct: 255 GEFAGISFAPRFSPTGGSVVLSATRGGGSDIFVVDLASRAKRQITNSNGAIDTSPCFSPD 314

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            SQIVF SDR G  QLY+M ++G   KRIS      Y  PVWSP+GDLIAFT+     F+
Sbjct: 315 GSQIVFNSDRGGSPQLYIMSASGGAAKRISYGS-GQYGSPVWSPRGDLIAFTRIGSGGFS 373

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-----KDGDTGSKLYSIDLNGRN 427
           +GVM  DG+ ER+L +   +   T+ P+GR L F R+           S + +ID+ G N
Sbjct: 374 LGVMNPDGTGERILTQGFTVDGATFCPNGRVLAFCRQSASGAGGAGFASGIGTIDITGFN 433

Query: 428 ETLINTPAYASDPQW 442
           E  I     ASDP W
Sbjct: 434 ERPIRISTGASDPAW 448


>gi|87198418|ref|YP_495675.1| translocation protein TolB [Novosphingobium aromaticivorans DSM
           12444]
 gi|119371031|sp|Q2GBD2|TOLB1_NOVAD RecName: Full=Protein tolB 1; Flags: Precursor
 gi|87134099|gb|ABD24841.1| TolB-like protein [Novosphingobium aromaticivorans DSM 12444]
          Length = 451

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 149/411 (36%), Positives = 223/411 (54%), Gaps = 14/411 (3%)

Query: 34  AFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
           A    ATN+   +P S       S   LG  +++V+S +L+ + +F  +  +S  +    
Sbjct: 48  AIPAFATNADVPTPTSAG-----STSALGQALAQVISANLRNNGLFKPVGPESLPRPGFE 102

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
               P F  W++  A++LV G V   G  +L V   L+DV  ++Q+    +  +PA WR+
Sbjct: 103 QVQAPDFAVWSARSAEMLVQGYVRANGDGQLTVGCYLYDVALKQQLEKAGWTVAPADWRR 162

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            AH  +D IY  ++GE   F+SR+ +++ES         L +MD DGAN RYLT S    
Sbjct: 163 AAHKCADMIYARLSGESPFFDSRVAYIAESGPKDRRMKRLAIMDSDGANHRYLT-SGQAT 221

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
              PRFSP+ + + Y +Y +    R+Y+ D   +   + +        APR+S +GK  L
Sbjct: 222 ALTPRFSPDYKSILYLSYLNGRP-RIYVYDLAANTQ-RLVTETPGPTFAPRWSPDGKWIL 279

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            S+      DIY V     A++RLT+T  I++  S+SPD S+IVFESDR G +Q+YVM +
Sbjct: 280 YSMATAGNTDIYKVPASGGASQRLTDTPGIDVGGSFSPDGSRIVFESDRSGSQQIYVMNA 339

Query: 334 NGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           +GSD +RIS    + A+   P WSP+GD IAFT   G    I V+   G   R L +   
Sbjct: 340 DGSDHRRISFFGGRAAT---PEWSPRGDQIAFTHIVG-NLRIAVVSPGGGDLRYLTDSWQ 395

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +APTWSP+GR + F R + G   + ++ +DL GRNE  ++TP  ASDP W
Sbjct: 396 DEAPTWSPNGRIIQFFRTEKGSGKASVWQVDLTGRNERRLSTPGDASDPAW 446


>gi|149185617|ref|ZP_01863933.1| translocation protein TolB precursor [Erythrobacter sp. SD-21]
 gi|148830837|gb|EDL49272.1| translocation protein TolB precursor [Erythrobacter sp. SD-21]
          Length = 460

 Score =  243 bits (620), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 143/384 (37%), Positives = 214/384 (55%), Gaps = 6/384 (1%)

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
           + LG +++ V++ +L+ + +F     DS  +      + P +  W+  GA++LV G V  
Sbjct: 78  EALGLEMARVITANLRNNGLFKPAGPDSLPRPEFANITSPVWGTWSVRGAEMLVHGYVRA 137

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
              DRL V   L+D+  +++++ + +  SPA WR+ AH  SD IY  +TGE   F+SRI 
Sbjct: 138 RSDDRLTVGCYLYDMALQQRLVAEGWVVSPADWRRAAHKCSDLIYSRLTGESPFFDSRIA 197

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +++E+         L +MD DGAN R++T  R   L  PR+SP+ +++ Y +Y D +  R
Sbjct: 198 YIAETGPKDNRVKRLAIMDSDGANHRFITTGRSTAL-TPRYSPDYKRLVYLSYVDGNP-R 255

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +Y+ D     +   +    +   APR+S +G+  L S+      DIY V  Q   +ERLT
Sbjct: 256 IYVYDIGTG-SQTLVTQSDNPTFAPRWSPDGRWILYSMAVGGNTDIYRVSAQGGRSERLT 314

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +T  I+I  SYSPD  +IVFESDR G +Q YVM ++GS+Q+RIS    +    P WSP+G
Sbjct: 315 DTPGIDIGGSYSPDGRRIVFESDRSGAQQCYVMDADGSNQRRISFGG-SRCATPEWSPRG 373

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           D IAFT  S   F I VM   G   R L      +APTW+P+GR + F R +     + L
Sbjct: 374 DQIAFTNAS--SFNISVMSPSGGNVRTLTRGWQDEAPTWAPNGRIIQFFRTERNSGKTSL 431

Query: 419 YSIDLNGRNETLINTPAYASDPQW 442
           + +DL G NE  + TP  ASDP W
Sbjct: 432 WQVDLTGENERSLPTPVDASDPAW 455


>gi|85374728|ref|YP_458790.1| translocation protein TolB [Erythrobacter litoralis HTCC2594]
 gi|84787811|gb|ABC63993.1| Tol biopolymer transport system [Erythrobacter litoralis HTCC2594]
          Length = 471

 Score =  242 bits (618), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 141/384 (36%), Positives = 215/384 (55%), Gaps = 9/384 (2%)

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           LG +++ V+S +L+ + +F     D   +      + P++  W++ GA++LV G V   G
Sbjct: 90  LGAELARVISNNLRNNGLFKPSGPDGLPRPTFPQITDPQWAVWSNRGAEMLVHGYVRARG 149

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
              L V   L+D+  R +++   +   PA WR+ AH  SD +Y  +TGE   F+SRI ++
Sbjct: 150 DGNLVVGCYLYDMALRDELVRSGWVVPPADWRRAAHKCSDLVYSRLTGESPFFDSRIAYI 209

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +E+         L +MD DGAN R++T  R   L  PR+SP+ +++ Y +Y D +  R+Y
Sbjct: 210 AETGPKDNRTKRLAIMDSDGANHRFITTGRATAL-TPRYSPDYRRLLYLSYVDGNP-RIY 267

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D    R  + +    +   APR+S +G+  L S+  +   DIY V  +   + RLT  
Sbjct: 268 IYDIGTGRQ-QLVTESTNPTFAPRWSPDGRWILYSMAVNGNTDIYRVSAEGGPSVRLTTE 326

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQG 358
             I++  SYSPD SQIVFESDR G +Q+Y+M S+G++Q+RIS    + A+   P WSP+G
Sbjct: 327 PGIDVGGSYSPDGSQIVFESDRSGSQQVYIMNSDGTNQRRISFFGGRAAT---PEWSPRG 383

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           D IAFT   G+ F I VM  +G   R L      +APTW+P+GR + F R +     + L
Sbjct: 384 DQIAFTYIPGD-FNIAVMSPNGRNFRKLSNGWQDEAPTWAPNGRIIQFFRTERNTGRTAL 442

Query: 419 YSIDLNGRNETLINTPAYASDPQW 442
           Y +DL G N   +NTP  ASDP W
Sbjct: 443 YQVDLTGDNLRRLNTPVDASDPAW 466


>gi|88607556|ref|YP_505595.1| translocation protein TolB [Anaplasma phagocytophilum HZ]
 gi|88598619|gb|ABD44089.1| TolB family protein [Anaplasma phagocytophilum HZ]
          Length = 435

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/456 (32%), Positives = 238/456 (52%), Gaps = 33/456 (7%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID- 59
           MS+R  +A           LL   GG       A ++++    N   +SIAF    S + 
Sbjct: 1   MSIRLGVATFF------IFLLFCCGGAV-----ASLRLSITKGNTGKLSIAFAPLHSFES 49

Query: 60  ----ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP--DSIPRFQDWNSLGAQVLVT 113
               ++G   ++++ KDL  + +F+       + +I +P  D       W  L   +L+T
Sbjct: 50  NLAQKIGESCTDIILKDLNNTGLFDA------RIEILDPTSDGAAYSNVWRELKHDILLT 103

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G V +    R+ ++  +WDV   K++ GK F      WR+ AHT++D IY  ITG  G F
Sbjct: 104 GNVQELSHGRMGIKLFVWDVAAEKKLSGKSFNFEIGGWRRAAHTVADHIYTRITGNGGYF 163

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA-TYD 232
           +S+I ++++ +     +  + +MD DGAN  Y +   +  L  PRFSP+ + + Y  T  
Sbjct: 164 DSKIAYIADMLG----ERRIALMDYDGANSVYASIDNNGWLSFPRFSPDTKSIVYTLTSQ 219

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                RV L D R + +   IG    ++ + RFS +G+  L+S   + + DIYS  L S 
Sbjct: 220 SSPSGRVMLYDMRREVSSLLIG-MSGIVSSVRFSPSGREILLSESLNGSTDIYSFSLISK 278

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RLT   F+N SASYSPD   IVF SDR+G   LY+M +NGS+ ++IS      Y  P
Sbjct: 279 KLTRLTADEFMNTSASYSPDEKSIVFASDRDGGSHLYIMDANGSNPRKISSG-SGRYMSP 337

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR--KK 410
           VWSP G  IAFTK  G +  IG+M+ +GS+ER++  D   + P+W+P+G+++++++  ++
Sbjct: 338 VWSPNGTWIAFTKVKGARCYIGIMRPNGSKERMIASDCFAEGPSWAPNGQAVLYTKHVQR 397

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                ++L  +DL+  N   INTP+ A    W   M
Sbjct: 398 VEHLATELAMVDLSSMNRRAINTPSDALIAHWSNTM 433


>gi|87199039|ref|YP_496296.1| translocation protein TolB [Novosphingobium aromaticivorans DSM
           12444]
 gi|119371032|sp|Q2G9L1|TOLB2_NOVAD RecName: Full=Protein tolB 2; Flags: Precursor
 gi|87134720|gb|ABD25462.1| TolB-like protein [Novosphingobium aromaticivorans DSM 12444]
          Length = 461

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/388 (36%), Positives = 212/388 (54%), Gaps = 9/388 (2%)

Query: 57  SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV 116
           + + LG  V+ VV  DL+ + +F  +  D+         + P F  W    A++LV G V
Sbjct: 76  TTEALGRNVARVVFNDLKNNGLFKPVGPDALPAIAFPQVAAPAFDAWRGRSAEMLVQGFV 135

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                 RL V   L+DV    ++  + +   P  WR+ AH  +D +Y  ++GE   F+S+
Sbjct: 136 KANEDGRLTVGCYLYDVALGSELARQGYVVKPEEWRRAAHKCADMVYSRLSGESPFFDSK 195

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I +++E+      +  L +MD DGAN R++T  +   L  PR+SP+  ++ Y +Y +   
Sbjct: 196 IAYIAETGPKDRRRKQLAIMDSDGANHRFITNGQATAL-TPRYSPDYSQIVYLSYLN-GA 253

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            R+Y+ +    +  K + +  +   APR+S +GK  L S+      DIY V +   A+ R
Sbjct: 254 PRIYIYNIGTGQQ-KLVTSSTNPTFAPRWSPDGKWILYSMSVAGNTDIYRVSVNGGASTR 312

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVW 354
           LT++  I++  SYSPD S+IVFESDR G +QLYVM ++GS+QKRIS    + A+   P W
Sbjct: 313 LTDSPGIDVGGSYSPDGSRIVFESDRSGSQQLYVMNADGSNQKRISFFGGRAAT---PEW 369

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           SP+GD IAFT   G  F I V    G   R L +    +APTWSP+GR + F R + G  
Sbjct: 370 SPRGDQIAFTHLGG-NFRIAVTDPSGGNMRFLTDSWQDEAPTWSPNGRIVQFFRTERGSG 428

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQW 442
            + ++ +DL GRNE  +NTP   SDP W
Sbjct: 429 KTGIWQVDLTGRNERKLNTPVDGSDPAW 456


>gi|117923781|ref|YP_864398.1| TolB domain-containing protein [Magnetococcus sp. MC-1]
 gi|117607537|gb|ABK42992.1| TolB, N-terminal domain protein [Magnetococcus sp. MC-1]
          Length = 450

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 149/430 (34%), Positives = 240/430 (55%), Gaps = 31/430 (7%)

Query: 32  IHA-FVKVATNSANYSPVSIAFTKFVSI---------DELGGKVSEVVSKDLQRSDVFNL 81
           +HA  + +        P+ IA   F S+         D    +++ +V  DL  S +F  
Sbjct: 28  VHAQGMMIEVQKQGLEPMPIAIPSFASVGLNGHVEVGDRFSHQLTGLVISDLSGSGLFRP 87

Query: 82  ISQDSFKQKITNPDSI----PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           + Q  F Q     D +    P F+ W  +GA  +V G +   G  R++V+F L D+  R 
Sbjct: 88  LEQRGFLQP---SDKLWQQGPDFRKWRLVGADAVVQGAITYRGS-RIQVDFFLHDIS-RG 142

Query: 138 QIIGK--KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            +IGK  +F + P +WR +AH ++D+IY  +TGE+  F SRI FV++       ++ L +
Sbjct: 143 TLIGKGWRFTTKPENWRHVAHRVADEIYTRLTGERAYFTSRIAFVAKRDK----QSFLSM 198

Query: 196 MDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           MD DGAN   L    R+ ++  PRFSPN +++ Y +Y+  +  R+YL D    +  KR  
Sbjct: 199 MDADGANRMDLKVKGRNDLVLTPRFSPNGEQLLYISYESSEP-RIYLWDLYTGKRVKR-S 256

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           N+  +   P +S +G R  +++ KD   +IY +D+++ + +RLT    I+ S S+SPD  
Sbjct: 257 NYPGLNSTPAWSPDGNRMALTLSKDGNSEIYVIDMRNQSLQRLTYNAAIDTSPSWSPDGR 316

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++VF SDR G  QLY+M ++GSD +R++Q  ++S   P WS +GD IAF +  G KF I 
Sbjct: 317 RMVFTSDRAGTPQLYIMDADGSDVRRLTQRGQSST-APSWSNRGDKIAFVRGGGGKFRIA 375

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN--ETLIN 432
           V+   G  E+LL +    ++PTWSP+GR ++FSR++ G + ++L++ID+ G N  E  + 
Sbjct: 376 VIDPTGRDEQLLTDSWMDESPTWSPNGRVILFSRQQQGSSRTRLFTIDITGFNEQEVPLE 435

Query: 433 TPAYASDPQW 442
               ASDP W
Sbjct: 436 QDISASDPSW 445


>gi|326388397|ref|ZP_08209993.1| translocation protein TolB [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207129|gb|EGD57950.1| translocation protein TolB [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 478

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 142/387 (36%), Positives = 210/387 (54%), Gaps = 11/387 (2%)

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
           + +G  ++ VV  DL+ + +F     DS         + P F  W +  A++LV G V  
Sbjct: 95  EAVGRNLARVVFNDLKFNGLFKPTGPDSLPGIAYAEVTAPAFSGWRARSAEMLVQGFVKG 154

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
               RL V   L+DV   +++  + +   P  WR+ AH  +D +Y  ++GE   F+S+I 
Sbjct: 155 GADGRLTVGCYLYDVALGQELAREGYVVKPEDWRRAAHKCADMVYSRLSGESPFFDSKIA 214

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +++E+      +  L +MD DGAN R++T  +   L  PR+SP+  K+ Y +Y D    R
Sbjct: 215 YIAETGPKDHRRKQLAIMDSDGANHRFITNGQATAL-TPRYSPDYSKILYLSYLDGRP-R 272

Query: 239 VYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +Y+ D  I    +R +   +    APR+S +GK  L S+      DIY V      +ERL
Sbjct: 273 IYVYD--IGSGSQRLVTEGKGPTFAPRWSPDGKSILYSMAIAGNTDIYRVPASGGPSERL 330

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWS 355
           TNT  INI  S+SPD  +IVFESDR G +Q+YVM S+GS Q RIS    + A+   P WS
Sbjct: 331 TNTPGINIGGSFSPDGRKIVFESDRSGSQQVYVMNSDGSGQHRISFFGGRAAT---PEWS 387

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P+GD IAFT  +G    + VM  DG+  R L +    +APTW+P+GR + F R +     
Sbjct: 388 PRGDQIAFTHIAG-NLRVAVMDPDGNNLRYLTDSWQDEAPTWAPNGRIIQFFRTEKNTGH 446

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQW 442
           + ++ +DL GRNE  + TP  ASDP W
Sbjct: 447 TSIWQVDLTGRNERRLKTPVDASDPAW 473


>gi|296283271|ref|ZP_06861269.1| translocation protein TolB [Citromicrobium bathyomarinum JL354]
          Length = 467

 Score =  237 bits (604), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 137/384 (35%), Positives = 211/384 (54%), Gaps = 9/384 (2%)

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           LG +++ V++ DLQ + +F     D+  +      + P +  W   GA++LV G V    
Sbjct: 86  LGAELARVITADLQNNGLFAPTGPDALPKPNYPQITDPVWNMWRMRGAEMLVQGYVRPRA 145

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
             +L V   L+DV    ++    +   P+ WR+ AH  +D +Y  +TGE   F+SRI ++
Sbjct: 146 DGKLVVGCYLYDVALNDELARSGWVVPPSDWRRAAHKCADLVYSRLTGESPFFDSRIAYI 205

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +E+         L +MD DGAN R++T  R   L  PR+SP+ +K+ Y +Y D +  R+Y
Sbjct: 206 AETGPKDNRTKRLAIMDSDGANHRFITTGRATAL-TPRYSPDYRKLMYLSYVDGNP-RIY 263

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D    +    +    +   APR+S +G+  L S+  +   DIY V     A+ERLT+ 
Sbjct: 264 IYDIGTGKQ-TLVTESSNPTFAPRWSPDGRWVLYSMAVNGNTDIYRVSANGGASERLTDA 322

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQG 358
             I++  SYSPD ++IVFESDR G +Q+Y+M ++GS+Q+RI+    + A+   P WSP+G
Sbjct: 323 PGIDVGGSYSPDGTRIVFESDRSGAQQIYMMNADGSNQRRITFFGGRAAT---PEWSPRG 379

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           D IAFT   G+ F I  M  DG   R L +    +APTW+P+GR L F R +     + +
Sbjct: 380 DQIAFTYIPGD-FNIATMSPDGKNFRKLTDGWQDEAPTWAPNGRILQFFRTERNTGRTAI 438

Query: 419 YSIDLNGRNETLINTPAYASDPQW 442
           Y +DL G N   + TP  ASDP W
Sbjct: 439 YQVDLTGENLRRLPTPVDASDPAW 462


>gi|218516474|ref|ZP_03513314.1| translocation protein TolB [Rhizobium etli 8C-3]
          Length = 229

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 114/231 (49%), Positives = 162/231 (70%), Gaps = 3/231 (1%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PRFSPN+Q+V Y ++ ++   RVY++     +  + +GNF  M  +PRFS +G++ ++S+
Sbjct: 2   PRFSPNRQEVTYMSFANQQP-RVYMLQLETGQR-EVVGNFPGMTFSPRFSPDGQKVIMSL 59

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           Q++   +IY++DL+S  T RLT+T  I+ S SYSPD +++ FESDR GK Q+YVM ++GS
Sbjct: 60  QQEGNSNIYTMDLRSRKTTRLTSTAAIDTSPSYSPDGARVSFESDRGGKPQIYVMNADGS 119

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            Q RIS   + SY  PVWSP+GDLIAFTK +G KF+IGVMK DGS ER+L    + + PT
Sbjct: 120 GQTRISFG-DGSYSTPVWSPRGDLIAFTKQAGGKFSIGVMKPDGSGERILTTGFHNEGPT 178

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           W+P+GR L+F R+  G  G +LYSIDL G NE L+ TP+Y SDP W   ++
Sbjct: 179 WAPNGRVLMFFRQAAGAGGPQLYSIDLTGYNEQLVKTPSYGSDPAWSPLLE 229


>gi|58698639|ref|ZP_00373533.1| tolB protein, putative [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225629902|ref|YP_002726693.1| translocation protein TolB precursor [Wolbachia sp. wRi]
 gi|254764846|sp|C0R560|TOLB_WOLWR RecName: Full=Protein tolB; Flags: Precursor
 gi|58534840|gb|EAL58945.1| tolB protein, putative [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225591883|gb|ACN94902.1| translocation protein TolB precursor [Wolbachia sp. wRi]
          Length = 420

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 149/434 (34%), Positives = 231/434 (53%), Gaps = 28/434 (6%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI----DELGGKVSEVVSKDLQR 75
           L++ I  F P    A + V    ++   + +  +K         EL   +++V+  +L  
Sbjct: 7   LVLFISLFIPYFTKAALYVDIKKSSVGNIGLVVSKCTCKTALESELSENIAKVIGTNLSN 66

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
             +FN+      + K            W S     +VT  + +     L + FRL+D   
Sbjct: 67  CGLFNVKRGAEAESK-----------SWKS---DTVVTVSLSEISGSALELSFRLFDTFT 112

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLC 194
           +++++ +        WRKI H +SD I+  + GEKG FN++I +++E   S       + 
Sbjct: 113 KRELLTQSVVFPAKDWRKIGHLVSDVIHDRLIGEKGHFNTKITYIAEEKDSNYKSVRKIA 172

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRI 253
           VM++DG+NI+YLT + D+ +  PRFSPN + + Y +Y +    + Y++   + D     I
Sbjct: 173 VMNQDGSNIKYLT-NGDRFVSTPRFSPNGKGIVYISYANG---KSYIILKNLKDNTESII 228

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             F  ++ APRFS +GK  LIS       +I S+DL S  T+++T    I+ S S+SPD 
Sbjct: 229 STFEGVVSAPRFSPDGKSLLISHSLGGETNILSLDLSSKRTKKITKGSAISTSPSFSPDQ 288

Query: 314 SQIVFESDREGKEQLYVMQ-SNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             + F SD  G +QLYV+  +N S + KRIS      Y  PVWSP+GDLIAFTK    KF
Sbjct: 289 KYMAFSSDISGSQQLYVIDFTNKSKKPKRISFG-SGRYATPVWSPKGDLIAFTKIQSGKF 347

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            IGVMK DG +ERLL E   +++P W P+GR +IF+R  +  + SKLY +DL  +N+ ++
Sbjct: 348 YIGVMKPDGKEERLLSEGHKIESPAWLPNGREIIFTR-TESPSNSKLYLVDLVKKNQKMV 406

Query: 432 NTPAYASDPQWVGF 445
           +TP  AS P W  F
Sbjct: 407 STPTNASLPDWSYF 420


>gi|42519955|ref|NP_965870.1| translocation protein TolB [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|67461989|sp|Q73IV6|TOLB_WOLPM RecName: Full=Protein tolB; Flags: Precursor
 gi|42409692|gb|AAS13804.1| tolB protein, putative [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 420

 Score =  233 bits (595), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 149/434 (34%), Positives = 231/434 (53%), Gaps = 28/434 (6%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI----DELGGKVSEVVSKDLQR 75
           L++ I  F P    A + V    ++   + +  +K         EL   +++V+  +L  
Sbjct: 7   LVLFISLFIPYFTKAALYVDIKKSSVGNIGLVVSKCTCKTALESELSENIAKVIGTNLSN 66

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
             +FN+      + K            W S     +VT  + +     L + FRL+D   
Sbjct: 67  CGLFNVKRSAEAESK-----------SWKS---DTVVTVSLSEISGSALELSFRLFDAFT 112

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLC 194
           +++++ +        WRKI H +SD I+  + GEKG FN++I +++E   S       + 
Sbjct: 113 KRELLTQSVVFPAKDWRKIGHLVSDVIHDRLIGEKGHFNTKITYIAEEKDSNYKSVRKIA 172

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRI 253
           VM++DG+NI+YLT + D+ +  PRFSPN + + Y +Y +    + Y++   + D     I
Sbjct: 173 VMNQDGSNIKYLT-NGDRFVSTPRFSPNGKGIVYISYANG---KSYIILKNLKDNTESII 228

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             F  ++ APRFS +GK  LIS       +I S+DL S  T+++T    I+ S S+SPD 
Sbjct: 229 SAFEGVVSAPRFSPDGKSLLISHSLGGETNILSLDLSSKRTKKITKGSAISTSPSFSPDQ 288

Query: 314 SQIVFESDREGKEQLYVMQ-SNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             + F SD  G +QLYV+  +N S + KRIS      Y  PVWSP+GDLIAFTK    KF
Sbjct: 289 KYMAFSSDISGSQQLYVIDFTNKSKKPKRISFG-SGRYATPVWSPKGDLIAFTKIQSGKF 347

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            IGVMK DG +ERLL E   +++P W P+GR +IF+R  +  + SKLY +DL  +N+ ++
Sbjct: 348 YIGVMKPDGKEERLLSEGHKIESPAWLPNGREIIFTR-TESPSNSKLYLVDLVKKNQKMV 406

Query: 432 NTPAYASDPQWVGF 445
           +TP  AS P W  F
Sbjct: 407 STPTNASLPDWSYF 420


>gi|225677115|ref|ZP_03788116.1| translocation protein TolB precursor [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590843|gb|EEH12069.1| translocation protein TolB precursor [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 420

 Score =  233 bits (593), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 149/434 (34%), Positives = 231/434 (53%), Gaps = 28/434 (6%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI----DELGGKVSEVVSKDLQR 75
           L++ I  F P    A + V    ++   + +  +K         EL   +++V+  +L  
Sbjct: 7   LVLFISLFIPYFTKAALYVDIKKSSVGNIGLVVSKCTCKTALESELSENIAKVIGTNLSN 66

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
             +FN+      + K            W S     +VT  + +     L + FRL+D   
Sbjct: 67  CGLFNVKRGAEAESK-----------SWKS---DTVVTVSLSEISGSALELSFRLFDAFT 112

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLC 194
           +++++ +        WRKI H +SD I+  + GEKG FN++I +++E   S       + 
Sbjct: 113 KRELLTQSVVFPAKDWRKIGHLVSDVIHDRLIGEKGHFNTKITYIAEEKDSNYKSVRKIA 172

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRI 253
           VM++DG+NI+YLT + D+ +  PRFSPN + + Y +Y +    + Y++   + D     I
Sbjct: 173 VMNQDGSNIKYLT-NGDRFVSTPRFSPNGKGIVYISYANG---KSYIILKNLKDNTESII 228

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             F  ++ APRFS +GK  LIS       +I S+DL S  T+++T    I+ S S+SPD 
Sbjct: 229 SAFEGVVSAPRFSPDGKSLLISHSLGGETNILSLDLSSKRTKKITKGSAISTSPSFSPDQ 288

Query: 314 SQIVFESDREGKEQLYVMQ-SNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             + F SD  G +QLYV+  +N S + KRIS      Y  PVWSP+GDLIAFTK    KF
Sbjct: 289 KYMAFSSDISGSQQLYVIDFTNKSKKPKRISFG-SGRYATPVWSPKGDLIAFTKIQSGKF 347

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            IGVMK DG +ERLL E   +++P W P+GR +IF+R  +  + SKLY +DL  +N+ ++
Sbjct: 348 YIGVMKPDGKEERLLSEGHKIESPAWLPNGREIIFTR-TESPSNSKLYLVDLVKKNQKMV 406

Query: 432 NTPAYASDPQWVGF 445
           +TP  AS P W  F
Sbjct: 407 STPTNASLPDWSYF 420


>gi|213019077|ref|ZP_03334884.1| Protein tolB precursor [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995186|gb|EEB55827.1| Protein tolB precursor [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 427

 Score =  230 bits (587), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 148/434 (34%), Positives = 229/434 (52%), Gaps = 30/434 (6%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK----DLQR 75
           L++ I  F P S  A + V    +N   + +  +K     E+  ++SE ++K    +L  
Sbjct: 16  LVLFISLFIPYSTKAVLYVDIKKSNIGNIDLVVSKCACKTEVENELSESITKVIETNLSN 75

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
             +FN + +D+            + + W S     +VT  + +     L + FRL D   
Sbjct: 76  CGLFN-VKRDA------------KVESWKS---DTVVTISLSEVSNRNLELSFRLSDSFT 119

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLC 194
            ++++ +        WRKI+H +SD I+  + GEKG FN++I +++E   S       + 
Sbjct: 120 NRELLTQSVVFLAKDWRKISHLVSDLIHDRLIGEKGHFNTKITYIAEEKDSNYKSVRKIA 179

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRI 253
           VM++DG+NI+YLT + ++ +  PRFSPN + + Y +Y +    + Y++   + D     I
Sbjct: 180 VMNQDGSNIKYLT-NGEKFVSTPRFSPNGKGIVYISYTNG---KSYIILKNLKDNTESII 235

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             F  +I APRFS +GK   IS       +I S+DL S  T+++T    I+ S S SPD 
Sbjct: 236 SAFEGVISAPRFSPDGKSLFISHSLSGETNILSLDLSSKRTKKITKGSAISTSPSLSPDQ 295

Query: 314 SQIVFESDREGKEQLYVM--QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             +VF SD  G +QLY++         KRIS      Y  PVWSP+GDLIAFTK    KF
Sbjct: 296 KYMVFSSDISGSQQLYIIDFTKKSKKPKRISFG-NGRYATPVWSPKGDLIAFTKIQSGKF 354

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            IGVMK DG +ERLL E   +++P W P+GR +IF+   +  + SKLY +DL  +N+ ++
Sbjct: 355 YIGVMKPDGKEERLLSEGHKIESPAWLPNGREIIFTN-AESPSNSKLYLVDLVKKNQKMV 413

Query: 432 NTPAYASDPQWVGF 445
            TP  AS P W  F
Sbjct: 414 FTPTNASLPDWSYF 427


>gi|190570675|ref|YP_001975033.1| Protein tolB precursor [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|226705897|sp|B3CP06|TOLB_WOLPP RecName: Full=Protein tolB; Flags: Precursor
 gi|190356947|emb|CAQ54333.1| Protein tolB precursor [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 418

 Score =  230 bits (587), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 148/434 (34%), Positives = 229/434 (52%), Gaps = 30/434 (6%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK----DLQR 75
           L++ I  F P S  A + V    +N   + +  +K     E+  ++SE ++K    +L  
Sbjct: 7   LVLFISLFIPYSTKAVLYVDIKKSNIGNIDLVVSKCACKTEVENELSESITKVIETNLSN 66

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
             +FN + +D+            + + W S     +VT  + +     L + FRL D   
Sbjct: 67  CGLFN-VKRDA------------KVESWKS---DTVVTISLSEVSNRNLELSFRLSDSFT 110

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLC 194
            ++++ +        WRKI+H +SD I+  + GEKG FN++I +++E   S       + 
Sbjct: 111 NRELLTQSVVFLAKDWRKISHLVSDLIHDRLIGEKGHFNTKITYIAEEKDSNYKSVRKIA 170

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRI 253
           VM++DG+NI+YLT + ++ +  PRFSPN + + Y +Y +    + Y++   + D     I
Sbjct: 171 VMNQDGSNIKYLT-NGEKFVSTPRFSPNGKGIVYISYTNG---KSYIILKNLKDNTESII 226

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             F  +I APRFS +GK   IS       +I S+DL S  T+++T    I+ S S SPD 
Sbjct: 227 SAFEGVISAPRFSPDGKSLFISHSLSGETNILSLDLSSKRTKKITKGSAISTSPSLSPDQ 286

Query: 314 SQIVFESDREGKEQLYVM--QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             +VF SD  G +QLY++         KRIS      Y  PVWSP+GDLIAFTK    KF
Sbjct: 287 KYMVFSSDISGSQQLYIIDFTKKSKKPKRISFG-NGRYATPVWSPKGDLIAFTKIQSGKF 345

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            IGVMK DG +ERLL E   +++P W P+GR +IF+   +  + SKLY +DL  +N+ ++
Sbjct: 346 YIGVMKPDGKEERLLSEGHKIESPAWLPNGREIIFTN-AESPSNSKLYLVDLVKKNQKMV 404

Query: 432 NTPAYASDPQWVGF 445
            TP  AS P W  F
Sbjct: 405 FTPTNASLPDWSYF 418


>gi|99034160|ref|ZP_01314250.1| hypothetical protein Wendoof_01000957 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 396

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 139/408 (34%), Positives = 215/408 (52%), Gaps = 28/408 (6%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI----DELGGKVSEVVSKDLQR 75
           L++ I  F P    A + V    ++   + +  +K         EL   +++V+  +L  
Sbjct: 7   LVLFISLFIPYFTKAALYVDIKKSSVGNIGLVVSKCTCKTALESELSENIAKVIGTNLSN 66

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
             +FN+      + K            W S     +VT  + +     L + FRL+D   
Sbjct: 67  CGLFNVKRGAEAESK-----------SWKS---DTVVTVSLSEISGSALELSFRLFDAFT 112

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLC 194
           +++++ +        WRKI H +SD I+  + GEKG FN++I +++E   S       + 
Sbjct: 113 KRELLTQSVVFPAKDWRKIGHLVSDVIHDRLIGEKGHFNTKITYIAEEKDSNYKSVRKIA 172

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRI 253
           VM++DG+NI+YLT + D+ +  PRFSPN + + Y +Y +    + Y++   + D     I
Sbjct: 173 VMNQDGSNIKYLT-NGDRFVSTPRFSPNGKGIVYISYANG---KSYIILKNLKDNTESII 228

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             F  ++ APRFS +GK  LIS       +I S+DL S  T+++T    I+ S S+SPD 
Sbjct: 229 SAFEGVVSAPRFSPDGKSLLISHSLGGETNILSLDLSSKRTKKITKGSAISTSPSFSPDQ 288

Query: 314 SQIVFESDREGKEQLYVMQ-SNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             + F SD  G +QLYV+  +N S + KRIS      Y  PVWSP+GDLIAFTK    KF
Sbjct: 289 KYMAFSSDISGSQQLYVIDFTNKSKKPKRISFG-SGRYATPVWSPKGDLIAFTKIQSGKF 347

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IGVMK DG +ERLL E   +++P W P+GR +IF+R  +  + SKLY
Sbjct: 348 YIGVMKPDGKEERLLSEGHKIESPAWLPNGREIIFTR-TESPSNSKLY 394


>gi|220935397|ref|YP_002514296.1| hypothetical protein Tgr7_2229 [Thioalkalivibrio sp. HL-EbGR7]
 gi|254764843|sp|B8GUI9|TOLB_THISH RecName: Full=Protein tolB; Flags: Precursor
 gi|219996707|gb|ACL73309.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 435

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 210/385 (54%), Gaps = 9/385 (2%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  ++  +L RS  F+ + Q    Q+ T    +  FQ W   G   +V GR++  G DR 
Sbjct: 58  IGAIIQANLHRSGQFSPMEQGRMPQRPTRGQDV-NFQVWRGAGVDYVVIGRLVPAGADRF 116

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            V+F+L+D    +Q+ G    +S +  R+ AH  SD IYQ ITG +G FN+R+ +VS + 
Sbjct: 117 NVQFQLFDTVRGRQVTGYSIPASSSQLRRAAHMASDIIYQQITGVRGAFNTRVAYVSVTR 176

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G  + +L V D DG N R +  SR  IL  P +SP+ +++AY ++++ +   +Y+ D 
Sbjct: 177 EGGEQRFALQVADADGHNPRTIFRSRQPIL-SPVWSPDGRRLAYVSFENRN-SEIYVQD- 233

Query: 245 RIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            ID A + RI +F+ +  AP +S +G+R  +++ +D   DIY ++L   +  R+TN+  I
Sbjct: 234 -IDGAQRERIASFQGINSAPAWSPDGRRMALTLSRDGQPDIYVMNLADRSLLRVTNSRSI 292

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +    ++PD   ++F SDR G  Q+Y    +G   +R++ D   +  +P  SP G L+A 
Sbjct: 293 DTEPEWTPDGRNLLFTSDRAGNPQIYEQSLSGGQPRRLTFDGRYN-GNPTLSPDGRLVAM 351

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G +F I V+ +   Q RLL +    +AP+++P+G  +I++    G  G +L ++  
Sbjct: 352 VNGDGGRFRIAVLDRQTRQFRLLTDGRLDEAPSFAPNGSMIIYATAGRGGQG-ELAAVSA 410

Query: 424 NGR-NETLINTPAYASDPQWVGFMD 447
           +GR  ++L+       +P W  F+D
Sbjct: 411 DGRVRQSLVLQEGEVREPAWSPFLD 435


>gi|307823677|ref|ZP_07653905.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacter
           tundripaludum SV96]
 gi|307734971|gb|EFO05820.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacter
           tundripaludum SV96]
          Length = 427

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 229/431 (53%), Gaps = 18/431 (4%)

Query: 18  CLLLVLIGGFFPTSIHAF-VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
            LL+ L+  + P+S     +++     +  P+S+          +   VS VV  DL RS
Sbjct: 7   ILLIGLVSFYVPSSYAEMTIEITEGIESALPISVVPFGMQGASGVPVDVSFVVDADLGRS 66

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F  + + S   K +  +++ +F+DW +LG   LV G+VI E   +  V+F+L+DV   
Sbjct: 67  GYFKTLDKQSMPAKPSTAEAV-QFKDWQALGQNYLVIGQVI-EDHGQYNVQFQLFDVYKG 124

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q++G +  SS A  R+ AH ISD I++ +TG+KG F+ RI +++ S       + L V 
Sbjct: 125 EQLMGYRMTSSAAELRRTAHHISDLIFEKLTGKKGVFSGRIAYITSSRQGKQSTSKLQVS 184

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D DG N + +  S +  L  P +SP+ +K+AY +++ +            +RA  R+  F
Sbjct: 185 DADGFNAQTIASSVEP-LMSPAWSPDGRKIAYVSFEKKSAAIYIQTLATGERA--RVAEF 241

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             +  AP +S +G +  +++ KD + DIY ++L + +  +LT +  I+   ++SPD S I
Sbjct: 242 PGINGAPSWSPDGAKLALTLSKDGSPDIYILNLVTRSLTKLTKSFAIDTEPTWSPDGSHI 301

Query: 317 VFESDREGKEQLYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           VF SDR GK QLY+M S G ++KR++     +  AS+     SP G  IA    +G  + 
Sbjct: 302 VFTSDRGGKPQLYIMSSQGGEEKRLTFSGNYNARASF-----SPDGKSIAMVHGNGSDYR 356

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLI 431
           I VM        ++ +  + ++P+++P+G  ++++ +K G  G  L ++ L+G+  + L+
Sbjct: 357 IAVMDMATKSVNVITDGRSDESPSFAPNGSMILYASRK-GSAG-YLSAVSLDGKMQQKLV 414

Query: 432 NTPAYASDPQW 442
              +   +P W
Sbjct: 415 FDSSEIREPAW 425


>gi|163796930|ref|ZP_02190886.1| TolB protein [alpha proteobacterium BAL199]
 gi|159177677|gb|EDP62228.1| TolB protein [alpha proteobacterium BAL199]
          Length = 207

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 92/195 (47%), Positives = 131/195 (67%), Gaps = 6/195 (3%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +G+F  M  APRFS +G + ++S+ +D   D+Y +DL++    RLTN+  I+ S S+SPD
Sbjct: 9   LGDFPGMTFAPRFSPDGNQVIMSLARDGVTDVYRMDLRTRRVTRLTNSASIDTSPSFSPD 68

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +Q+ F SDR G +QLYVM SNG   KRIS   +  Y  PVWSP+GDLIAFTK +G +F 
Sbjct: 69  GTQVAFNSDRGGAQQLYVMDSNGGGVKRISF-GQGQYATPVWSPRGDLIAFTKIAGGQFH 127

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-----SKLYSIDLNGRN 427
           IGVM+ DGS ERL+     ++AP+W+P+GR L++ +++  D+      +KL++IDL G N
Sbjct: 128 IGVMRVDGSGERLISSGYLVEAPSWAPNGRVLVYFKQQRTDSAGRGGETKLFTIDLTGYN 187

Query: 428 ETLINTPAYASDPQW 442
           E  + TP  ASDP W
Sbjct: 188 EREVVTPLDASDPAW 202


>gi|78224723|ref|YP_386470.1| WD-40-like beta propeller repeat-containing protein [Geobacter
           metallireducens GS-15]
 gi|119371044|sp|Q39PS9|TOLB_GEOMG RecName: Full=Protein tolB; Flags: Precursor
 gi|78195978|gb|ABB33745.1| WD40-like Beta Propeller [Geobacter metallireducens GS-15]
          Length = 429

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/458 (28%), Positives = 224/458 (48%), Gaps = 49/458 (10%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID- 59
           M+ R FI     + I LCL+        P  +H+          Y  V+ A T  +++  
Sbjct: 1   MTRRLFIL----ITIMLCLI--------PALLHS-------QEGYREVTAAGTHKLTLTV 41

Query: 60  ----ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPR--------FQDWNSLG 107
                LGG  +  V+++   +  F+++    F     +  +           F  W   G
Sbjct: 42  DSPRRLGGSDAPQVARETAEALQFDMVLAGPFTVTAPSAAAASAGIRPGEFDFAPWRGAG 101

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
             +LV       G + + +EFRL++V   K+I+ K++   P   R+IAHT SDDI  ++T
Sbjct: 102 VDLLVKSGYTVTG-NAMTMEFRLYNVTQGKEILAKRYTGRPGDVRRIAHTFSDDIMAALT 160

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           GE+G F  +I FVS    +     ++ +MD DG N++ LT +R  I   P FSP+ +++ 
Sbjct: 161 GERGPFTGKIAFVSTRAGA----KAIFLMDYDGHNVQQLTKNR-SINLNPDFSPSGKEII 215

Query: 228 YATY--DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           + +Y   + D+ R  L       A  RI ++R +     +S +GK   +++ KD   +IY
Sbjct: 216 FTSYRQGNPDLFRRELFTG----AEARISSYRGINATGAWSPDGKTIALTLSKDGNSEIY 271

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           ++        RLTNT  I +S ++SPD  +IVF SDR GK Q+++M ++G+  +R++   
Sbjct: 272 TISRDGKNPHRLTNTSAIEVSPAWSPDVRKIVFVSDRLGKPQIFIMNADGTGVRRLTTSG 331

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +   P WSP+GD I +++  G  F I  +  DG+ +  L  + + + P WSP GR + 
Sbjct: 332 NYN-VSPRWSPKGDRIVYSRQEG-GFQIYAINPDGTNDTRLTSEGSNEHPRWSPDGRFIT 389

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQW 442
           FS  + G  G  +Y +  +G  +T ++      S P W
Sbjct: 390 FSSTRGG--GEGIYVMRADGSGQTRVSGGKGRDSHPTW 425


>gi|320354281|ref|YP_004195620.1| TolB domain-containing protein [Desulfobulbus propionicus DSM 2032]
 gi|320122783|gb|ADW18329.1| TolB domain-containing protein [Desulfobulbus propionicus DSM 2032]
          Length = 428

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 198/387 (51%), Gaps = 24/387 (6%)

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  V+++++K L+      +I    +           R  DW SLGA  +V G+V  +  
Sbjct: 59  GAAVAQLLTKGLELHGFIGVIDSSRYGGS--------RDADWKSLGADYVVLGQVSGDPA 110

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             + VE ++ DV     + G++F  S A    +   + D + Q  TGE G   +RI +VS
Sbjct: 111 G-IAVEGQILDVASNASLAGRRFKGSAAQLEDMTLRLCDTLIQDFTGEMGVARTRIAYVS 169

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD--DEDILRV 239
           ++      +  + + D  G + R +T  R  +   PRF+P+   +AY+TY   ++D+   
Sbjct: 170 DATG----RKEVYISDILGRHPRQVTRHR-ALCVSPRFTPDGNYLAYSTYHRGNQDL--- 221

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y+ D R + A   +     + LAP FS +G+  ++++ K    D+YS+D Q N   +LT+
Sbjct: 222 YITDLRQNTATNALSRRNGLNLAPTFSPDGRTMVVTLSKGGNPDLYSMDRQGNIIRQLTS 281

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              IN+SASYSPD   + F SDR GK  +YVM + G   KR++  K     +PVWSP+GD
Sbjct: 282 GAGINVSASYSPDGQTLAFVSDRSGKPNVYVMSAGGGQAKRLTF-KCPENSEPVWSPKGD 340

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            IAFT   G  + + VM ++G   R L     N ++PTWSP GR L  +RK    + S++
Sbjct: 341 EIAFTGLQGGIYQLFVMDRNGGNVRQLSTGGGNYESPTWSPDGRLLAVTRKS--GSRSEI 398

Query: 419 YSIDLNGRN-ETLINTPAYASDPQWVG 444
             +  +G++  +L       S PQW G
Sbjct: 399 CVVSKSGKDVRSLFAMKGNQSYPQWSG 425


>gi|148262286|ref|YP_001228992.1| WD40 domain-containing protein [Geobacter uraniireducens Rf4]
 gi|146395786|gb|ABQ24419.1| WD40 domain protein beta Propeller [Geobacter uraniireducens Rf4]
          Length = 427

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/382 (31%), Positives = 195/382 (51%), Gaps = 18/382 (4%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLV-TGRVIKEGKDR 123
           +SEV S DL  +  F ++     + K         F  W + GA +LV +G  +    D 
Sbjct: 56  ISEVFSFDLTLAGPFAVMPTPPAESKSGIRPGEFDFAPWQAAGANLLVKSGYTVSA--DS 113

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           L +EFRL+DV   K++  K++    A  RKI HT  D+I  ++TGE+G F  +  FVS +
Sbjct: 114 LTIEFRLYDVARGKELAAKRYSGKRADLRKIVHTFGDEIMLAVTGERGPFTGKTAFVSTA 173

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD--DEDILRVYL 241
             +      +C+MD DG N++ LT     I   P FSPN +++ Y +Y   + D+ R  L
Sbjct: 174 TGN----KEICLMDYDGYNVQRLT-KNGSINLNPDFSPNGKELIYTSYKRRNPDLYRREL 228

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                 R   R G    + +   +S +G +  +++ KD   +IY++        +LTN  
Sbjct: 229 FSGTEARLSARPG----INVTGAWSPDGSKIALAMSKDGNSEIYTISKDGKQLAKLTNNS 284

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I +S ++SPD S+I F SDR GK Q+++M ++GS+  R++     +   P WSP+GD I
Sbjct: 285 AIEVSPAWSPDGSRIAFVSDRLGKPQVFIMNADGSNVSRLTTSGTYN-VSPRWSPKGDRI 343

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A+ +  G  F I V+  DGS +  L  + + + P WSP GR + FS  + G     +Y +
Sbjct: 344 AYCRQHGGGFQIYVINADGSSDVQLTSEGSNEHPRWSPDGRFITFSSTRGGK--EAIYVM 401

Query: 422 DLNGRNETLINTPAYA-SDPQW 442
             +G  +T ++    A S P W
Sbjct: 402 RSDGSGQTRVSRGKGADSHPAW 423


>gi|118588325|ref|ZP_01545734.1| translocation protein TolB precursor [Stappia aggregata IAM 12614]
 gi|118439031|gb|EAV45663.1| translocation protein TolB precursor [Stappia aggregata IAM 12614]
          Length = 189

 Score =  187 bits (474), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 93/190 (48%), Positives = 125/190 (65%), Gaps = 2/190 (1%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           M  APRFS +G+  ++S+Q+    +I+ +DL+S  T RLTN   I+ S S+SPD SQIVF
Sbjct: 1   MTFAPRFSPDGQSVVMSLQQGGNANIFKMDLRSRQTTRLTNDAAIDTSPSFSPDGSQIVF 60

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           ESDR G +QLYVM + G   +RIS      Y  PVWSP+GDLIAFTK    +F IGVM+ 
Sbjct: 61  ESDRGGTQQLYVMSAGGGGAQRISFGP-GRYSTPVWSPRGDLIAFTKQHQGRFMIGVMRP 119

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTPAYA 437
           DG  ER+L E  + + P WSP+GR L+F R   G + G +++++DL G NE  + TPA+A
Sbjct: 120 DGKGERILTEGYHNEGPAWSPNGRVLVFFRDTPGANGGPQVWTVDLTGYNEQRVETPAFA 179

Query: 438 SDPQWVGFMD 447
           SDP W   +D
Sbjct: 180 SDPSWSPLID 189


>gi|196019748|ref|XP_002119033.1| hypothetical protein TRIADDRAFT_63003 [Trichoplax adhaerens]
 gi|190577229|gb|EDV18481.1| hypothetical protein TRIADDRAFT_63003 [Trichoplax adhaerens]
          Length = 251

 Score =  186 bits (473), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 102/255 (40%), Positives = 152/255 (59%), Gaps = 7/255 (2%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIG 254
           MD+DGAN ++LT S ++ +  PRF    Q++ + +Y ++ +  +VY++D         IG
Sbjct: 1   MDQDGANFKFLT-SGNEFILSPRFDMKSQRITFMSYKNKKNPPKVYVLDLETGEQ-DLIG 58

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDS 313
           +   M  AP FS +    ++S+ K    +IY +DL +   + LTN   FI+ S SYSPD 
Sbjct: 59  DMAGMTFAPNFSPDNNHVVMSLAKKGTTNIYEIDLNTKIKKELTNIYGFIDTSPSYSPDG 118

Query: 314 SQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +I+F SDR G+  Q+YVM  +G + K+IS   E SY  P+WSP G  IAFTK     F 
Sbjct: 119 KKILFNSDRGGRRTQIYVMDRDGQNIKKISSG-EGSYRTPIWSPDGKWIAFTKILLGNFY 177

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           IG+MK DGS ERLL      + P+W+P+ R++IF R+K  D  +K+Y+ID++G NE +I 
Sbjct: 178 IGIMKPDGSDERLLTSSWLEEGPSWAPNSRTIIFGRQKR-DGSNKIYAIDIDGNNERIIY 236

Query: 433 TPAYASDPQWVGFMD 447
           TP   S P W   ++
Sbjct: 237 TPTDGSQPSWSAHLN 251


>gi|189426516|ref|YP_001953693.1| Tol-Pal system beta propeller repeat protein TolB [Geobacter
           lovleyi SZ]
 gi|189422775|gb|ACD97173.1| Tol-Pal system beta propeller repeat protein TolB [Geobacter
           lovleyi SZ]
          Length = 430

 Score =  183 bits (464), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 134/425 (31%), Positives = 216/425 (50%), Gaps = 40/425 (9%)

Query: 40  TNSANYSPVSIAFTKFVSI-------------DELGGKVSEVVSKDLQRSDVFNLISQDS 86
           T +ANY  V+ A  + + +              EL  + +E+ + DL  S +     +D+
Sbjct: 21  TGAANYIEVTAAGNRLLKLAVVPPQPMGTVIRPELANETAELHAFDLTMSGLVAAERRDA 80

Query: 87  ----FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
                   +T  D +P    W S G  +L+ G     G++ L +EFRL+DV  +K +  K
Sbjct: 81  APLVHGLALTPVDFVP----WLSAGYDLLIRGEYELRGQE-LTLEFRLYDVVAKKLLTSK 135

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           +F       R+ AH+ SD++ +++TGEKG F S+IL+VS    SG     L VMD DG N
Sbjct: 136 RFLGREKDLRRYAHSFSDEVLRALTGEKGAFTSKILYVSTQ--SG--NKELAVMDWDGFN 191

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATY--DDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            + LT +R  I   P  SP+ ++V + +Y   + D+ +  L          R G    + 
Sbjct: 192 SQQLTGNR-SINLSPDISPDGREVIFTSYKRGNPDLYKRALSSNLEVPVSSRSG----LN 246

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +   +S +G R  +++ KD   +IY+V    +A  RLT +   N+S +++PD S+I F S
Sbjct: 247 ITGAWSPDGNRIALALSKDGNTEIYTVAKDGSAPNRLTVSHAANVSPAWTPDGSKIAFVS 306

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           DR GK Q++VM +NG + +R+      SY  +P WSP+GD +AF + +G  F I V   D
Sbjct: 307 DRLGKPQIFVMDANGGNVRRLI--TSGSYNVNPSWSPKGDKLAFARMAG-GFQIFVANAD 363

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYAS 438
           GS E  L  + N + P WSP GR + FS ++ G     +Y +  +G  +T ++ +   + 
Sbjct: 364 GSNEIQLTFEGNNERPRWSPDGRLITFSSRRGGQ--EAIYVMRADGSGQTKVSRSKGLSQ 421

Query: 439 DPQWV 443
            P W 
Sbjct: 422 HPVWT 426


>gi|39995136|ref|NP_951087.1| tolB protein [Geobacter sulfurreducens PCA]
 gi|67461990|sp|Q74H67|TOLB_GEOSL RecName: Full=Protein tolB; Flags: Precursor
 gi|39981898|gb|AAR33360.1| tolB protein [Geobacter sulfurreducens PCA]
 gi|298504166|gb|ADI82889.1| TolB-related biopolymer transport periplasmic beta-propeller repeat
           protein [Geobacter sulfurreducens KN400]
          Length = 432

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 222/445 (49%), Gaps = 33/445 (7%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHA---FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           +++I   LL +L+    P  IH+   + +V  + A+   +++   +      LGG     
Sbjct: 3   HVRIFATLLALLVISVTPAVIHSEDVYREVTASGAHNLTLAVDNPR-----NLGGADDAA 57

Query: 69  VSKDLQRSDVFNLISQDSFK----QKITNPDSIPR----FQDWNSLGAQVLVTGRVIKEG 120
           +++D+     F++     F        T+P  I         W + G  +LV       G
Sbjct: 58  LARDVAEVLRFDMTLAGPFSVMAPPAGTSPGGIRPGEFDLDSWRNAGVDLLVKSGYTITG 117

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
            D + +EFRL++    +++  K++    +  R+I HT SDDI Q++TGE+G F  +I FV
Sbjct: 118 -DSVTMEFRLYNATQGRELAAKRYTGKRSDLRRITHTFSDDIMQTMTGERGPFTGKIAFV 176

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--DDEDILR 238
           S    SG     + +MD DG N++ LT +R  I   P FSPN +++AY +Y   + D+ R
Sbjct: 177 STE--SG--NKEIYLMDYDGHNVQRLTKNR-SINLNPDFSPNGRELAYTSYRRGNPDLFR 231

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
             +           + + R + +   +S +GK+  +++ +D   +IY++        RLT
Sbjct: 232 REIFTG----TEAVVSSHRGINVTGTWSPDGKQLALAMSRDGNSEIYAISRDGRDPRRLT 287

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               I++S ++SPD  +I F SDR GK Q+++M ++GSD +R++    A    P WSP+G
Sbjct: 288 THQAIDVSPAWSPDGKRIAFVSDRLGKPQVFIMNADGSDVRRLTTSG-AYNVSPRWSPKG 346

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           D + + +  G  F I  +  DG+ +  L  + + + P WSP GR L FS  +DG  G  +
Sbjct: 347 DRLVYCRQEG-GFQIYSIATDGTGDTRLTSEGSNEHPRWSPDGRFLTFSSTRDG--GEAI 403

Query: 419 YSIDLNGRNETLI-NTPAYASDPQW 442
           Y +  +G  +T +  +   AS P W
Sbjct: 404 YVMRSDGSGQTRVYRSKGKASHPTW 428


>gi|77163683|ref|YP_342208.1| hypothetical protein Noc_0145 [Nitrosococcus oceani ATCC 19707]
 gi|119371047|sp|Q3JER8|TOLB_NITOC RecName: Full=Protein tolB; Flags: Precursor
 gi|76881997|gb|ABA56678.1| TolB [Nitrosococcus oceani ATCC 19707]
          Length = 434

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 220/429 (51%), Gaps = 13/429 (3%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK-VSEVVSKDLQR 75
           L LL+ L+      S+ A + +       + + IA   F +      + V+ V++ DL R
Sbjct: 14  LALLVWLVSS---PSVFAVLTIEITGGTEAALPIAIVPFQNEGSTPPENVAAVIAADLAR 70

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  F  + ++    +  N   I +FQDW  LG++ LV G+VI  G DR  V F+L+D+  
Sbjct: 71  SGRFAPLPEEDLISRPRNASDI-QFQDWRRLGSEGLVIGKVISLGADRYEVRFQLFDIYK 129

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLC 194
            +Q++G+++    A  R +AH I+D IY+++TGEKG F + I FV+ S    G  + SL 
Sbjct: 130 EEQLVGRRYQVPAAGLRHLAHQIADLIYETLTGEKGIFTTHIAFVTVSRAAHGAKQYSLQ 189

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V D DG N   +  S++ IL  P +SP+  ++AY +++      V++ + R  +  + + 
Sbjct: 190 VADVDGHNPHTILRSKEPIL-SPAWSPDGTQLAYVSFERRRS-EVFVQELRTGQR-QSVA 246

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  AP +S +G +  + + K+   +IY  DL +    RLT+   I+   +++PD  
Sbjct: 247 SFSGINSAPDWSPDGGKLALVLSKEGNPEIYIRDLATGRLTRLTHNTAIDTEPAWAPDGG 306

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            IVF SDR G+ QLY +  +G   +R++ D  A      ++P G  +A       +F I 
Sbjct: 307 SIVFTSDRGGRPQLYQIPVSGGRAQRLTFDG-AYNASASFAPDGRRLALIHGDKGQFHIA 365

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINT 433
           V+     + ++L E    ++P+++P+GR ++++       G  L ++  +GR  + L   
Sbjct: 366 VLNLQSKELQVLTETRMDESPSFAPNGRMILYA--TSSPQGGVLAAVSTDGRVRQRLAQQ 423

Query: 434 PAYASDPQW 442
                +P W
Sbjct: 424 GDEVREPAW 432


>gi|254435418|ref|ZP_05048925.1| Tol-Pal system beta propeller repeat protein TolB [Nitrosococcus
           oceani AFC27]
 gi|207088529|gb|EDZ65801.1| Tol-Pal system beta propeller repeat protein TolB [Nitrosococcus
           oceani AFC27]
          Length = 422

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 220/429 (51%), Gaps = 13/429 (3%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK-VSEVVSKDLQR 75
           L LL+ L+      S+ A + +       + + IA   F +      + V+ V++ DL R
Sbjct: 2   LALLVWLVSS---PSVFAVLTIEITGGTEAALPIAIVPFQNEGSTPPENVAAVIAADLAR 58

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  F  + ++    +  N   I +FQDW  LG++ LV G+VI  G DR  V F+L+D+  
Sbjct: 59  SGRFAPLPEEDLISRPRNASDI-QFQDWRRLGSEGLVIGKVISLGADRYEVRFQLFDIYK 117

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLC 194
            +Q++G+++    A  R +AH I+D IY+++TGEKG F + I FV+ S    G  + SL 
Sbjct: 118 EEQLVGRRYQVPAAGLRHLAHQIADLIYETLTGEKGIFTTHIAFVTVSRAAHGAKQYSLQ 177

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V D DG N   +  S++ IL  P +SP+  ++AY +++      V++ + R  +  + + 
Sbjct: 178 VADVDGHNPHTILRSKEPIL-SPAWSPDGTQLAYVSFERRRS-EVFVQELRTGQR-QSVA 234

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  AP +S +G +  + + K+   +IY  DL +    RLT+   I+   +++PD  
Sbjct: 235 SFSGINSAPDWSPDGGKLALVLSKEGNPEIYIRDLATGRLTRLTHNTAIDTEPAWAPDGG 294

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            IVF SDR G+ QLY +  +G   +R++ D  A      ++P G  +A       +F I 
Sbjct: 295 SIVFTSDRGGRPQLYQIPVSGGRAQRLTFDG-AYNASASFAPDGRRLALIHGDKGQFHIA 353

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINT 433
           V+     + ++L E    ++P+++P+GR ++++       G  L ++  +GR  + L   
Sbjct: 354 VLNLQSKELQVLTETRMDESPSFAPNGRMILYA--TSSPQGGVLAAVSTDGRVRQRLAQQ 411

Query: 434 PAYASDPQW 442
                +P W
Sbjct: 412 GDEVREPAW 420


>gi|118588326|ref|ZP_01545735.1| translocation protein TolB precursor [Stappia aggregata IAM 12614]
 gi|118439032|gb|EAV45664.1| translocation protein TolB precursor [Stappia aggregata IAM 12614]
          Length = 260

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 136/224 (60%), Gaps = 5/224 (2%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSID---ELGGKVSEVVSKDLQRSDVFNLISQD 85
           P    A V++     N  P+ IA   F +     +L   ++ V++ DL+RS +F  +   
Sbjct: 31  PLPAAALVEIDITQGNIEPLPIALPSFSAEGGDGKLAADMTNVIAADLKRSGLFRPLDPA 90

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF 145
           SF QK  + +S PRF DW  + AQ LVTG V K+   RLR EFRLWDV   +Q++G++F+
Sbjct: 91  SFIQKNMSVNSTPRFGDWRQISAQALVTGTVTKQPDGRLRAEFRLWDVFAAEQMLGQQFY 150

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
           ++P +WR++AH I+D IY+ +TGEKG F++RI+FV E+         L +MD+DGAN+RY
Sbjct: 151 TTPDNWRRLAHIIADAIYERLTGEKGYFDTRIVFVDETGPKDKRVKRLAIMDQDGANVRY 210

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           LT   D ++  PRFSP  Q++ Y +Y   D   VYL++   D A
Sbjct: 211 LTRG-DDLVLTPRFSPTSQEITYMSYGGTDP-SVYLLNIETDSA 252


>gi|74318224|ref|YP_315964.1| translocation protein TolB [Thiobacillus denitrificans ATCC 25259]
 gi|119371065|sp|Q3SGT4|TOLB_THIDA RecName: Full=Protein tolB; Flags: Precursor
 gi|74057719|gb|AAZ98159.1| probable tolB-related transport protein [Thiobacillus denitrificans
           ATCC 25259]
          Length = 427

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 218/433 (50%), Gaps = 16/433 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF-VSIDELGGKVSEVVSK 71
           ++  L   L+ +G     + HA +++       + ++IA   F  +  +    ++++V+ 
Sbjct: 6   LRALLVFSLLCLGLSATRAAHAAMEIEVVGGAANKIAIAMVPFQTAAGQPSPPLTQIVAD 65

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  F++       Q +  P  +  +  W + GA+ +V G+V+  G  R  V FRL 
Sbjct: 66  DLARSGQFSMTDVTGAAQPV-EPSQV-DYAAWRTKGAEAMVIGQVVALGGGRFEVRFRLL 123

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           DV    Q+ G  +  + A WR   H I+D +Y+ +TG  G F+SRI +V +       + 
Sbjct: 124 DVVKGTQLAGYSYKITAAQWRATGHRIADVVYEKLTGIPGAFSSRIAYVQKQGK----RY 179

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V D DG N R +  S +  L  P FSP+  ++AY +++D+  + VY+   +     +
Sbjct: 180 ELRVADADGQNPRTIVRSLEP-LISPMFSPDGTRLAYVSFEDKKPV-VYVQSLQ-QGGRR 236

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           ++  F+    AP +S +G++  + + +D A  IY +++  +   RL  +  I+    +SP
Sbjct: 237 KVAAFKGSNSAPAWSPDGRQLAVVLTRDGASQIYLINVDGSGLTRLMRSGDIDTEPVFSP 296

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEK 370
           D   + F SDR G  Q+Y +  +G D KR+S   E SY   P  SP G  +A+    G +
Sbjct: 297 DGQTLYFTSDRGGSPQIYRVAKSGGDAKRVS--FEGSYNVSPTISPDGRYLAYISRDGGR 354

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           F + + +    Q R+L E +  +AP+++P+G++++++  + G     L ++ L+G+    
Sbjct: 355 FRVVLQELASGQTRVLTETTRDEAPSFAPNGQAVLYATVQGGR--GVLGTVTLDGKTRAR 412

Query: 431 INTPAY-ASDPQW 442
           ++     A +P W
Sbjct: 413 LSESGVDAREPAW 425


>gi|297539676|ref|YP_003675445.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Methylotenera sp. 301]
 gi|297259023|gb|ADI30868.1| Tol-Pal system beta propeller repeat protein TolB [Methylotenera
           sp. 301]
          Length = 439

 Score =  179 bits (454), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 218/428 (50%), Gaps = 16/428 (3%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKV 65
           F+  + +  +NL +    +  F P+  +A +++  +      V IA   F         +
Sbjct: 11  FLRLQFSTILNLAIFSASL--FIPSLANAALEIEISGGGAQQVPIAIVPFEQSGNSADNI 68

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
           S +++ DL+RS +F ++       K T+   I ++ +W +L AQ +  G V     +RL+
Sbjct: 69  SSIIAADLKRSGLFRVLETGGVVNKPTDITQI-KYSEWANLQAQAMAVGVVETLPNNRLK 127

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           V F+L DV  + Q+ G ++  +P   R  AH I+D IYQ +TGE G F SRI +++++  
Sbjct: 128 VTFQLADVLKQSQLTGMQYTIAPNQLRTTAHKIADVIYQKLTGESGIFASRIAYITKAND 187

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             ++K    V D DGAN   +  S++ I+  P +SP   K+AY +++ +  + +Y+    
Sbjct: 188 RYMLK----VADADGANPLTMVSSKEPII-SPAWSPEGNKIAYVSFEKKKPI-IYVQTLS 241

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R    +  F+    AP +S +G +  I +       +Y+++   +   R+T    I+ 
Sbjct: 242 GQRT--VLAGFKGNNSAPAWSPDGSKLAIVLTYGANSQVYTINADGSGLSRITKGNAIDT 299

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFT 364
             ++S D+  I F SDR GK Q+Y + +NG D +R++   E +Y   P +SP G  +A  
Sbjct: 300 EPTWSSDAKWIYFTSDRGGKPQIYKVSANGGDPQRVT--FEGAYNVSPRFSPDGKSLAMI 357

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +  G KF + +      Q +LL E S  ++P+++P+GR ++++ +  G     L ++  +
Sbjct: 358 RNDGGKFRVALQDLTTGQVQLLSEGSQDESPSFAPNGRVILYATRSSGH--GALAAVSAD 415

Query: 425 GRNETLIN 432
           GR +  +N
Sbjct: 416 GRVKQRLN 423


>gi|198282216|ref|YP_002218537.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665098|ref|YP_002424581.1| tol-pal system beta propeller repeat protein TolB
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198246737|gb|ACH82330.1| Tol-Pal system beta propeller repeat protein TolB
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218517311|gb|ACK77897.1| tol-pal system beta propeller repeat protein TolB
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 422

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 211/429 (49%), Gaps = 19/429 (4%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSI-AFTKFVSIDELGGKVSEVVSKDLQR 75
           L + L+      P      V++  N A+  P++I +F   ++       V+EVV  DL+ 
Sbjct: 8   LAIFLLAWAFVLPAQAALTVEITKNVASALPIAIPSFGPGIAGQP---SVAEVVRNDLRH 64

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F +I    +      P  + +  DW ++GA  L  G V +       V   +++V  
Sbjct: 65  SGLFRVIDPAGYPADPRAPGGV-KAADWTAVGATGLAVGSV-EPRNGGYAVNVYVYNVST 122

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            +++   +F  S A     AH ++D IYQ+ TG+ G F SRI +V ++  +      L V
Sbjct: 123 GQELTAHRFTCSAAELHMTAHHVADVIYQAFTGKPGPFASRIAYVRQTGAN----YELLV 178

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            + DG N   +   R  + F P +SP+ +++AY TY +   + +Y+ D    +  + I  
Sbjct: 179 AESDGWNPHPIVRGRMPV-FSPVWSPDNRRLAYVTYANARAV-IYVQDLATGQR-QSIAP 235

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
              ++ AP FS NG     +       ++Y  +LQ+    +LT+   IN S ++SPD S+
Sbjct: 236 GGEIVSAPAFSPNGTELAYARSSGGHTELYVANLQTGQRRQLTHDDAINTSPTWSPDGSR 295

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIG 374
           I+F SDR G  Q+Y M ++G    R+S D   SY   PV+SP G+ IAF   +   +A+ 
Sbjct: 296 IIFVSDRAGGPQIYAMNASGGAAHRLSYD--GSYNASPVYSPAGNAIAFIHRTNGVYALA 353

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           VM  DGS  R+L    N   P+++ +G+ +++  ++ G     L  + L+G+   ++++ 
Sbjct: 354 VMNPDGSGVRVLDAQGNCDHPSFAGNGQMILYGTQRGGR--KVLAEVSLDGKTMAILHSN 411

Query: 435 AYA-SDPQW 442
           A   S P W
Sbjct: 412 AGEDSQPAW 420


>gi|118574585|sp|Q1GYT1|TOLB_METFK RecName: Full=Protein tolB; Flags: Precursor
          Length = 433

 Score =  177 bits (450), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 214/422 (50%), Gaps = 17/422 (4%)

Query: 26  GFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK---VSEVVSKDLQRSDVFNLI 82
           G    + H  + V         + IA   F     + G+   ++ V+  DL+RS +F ++
Sbjct: 18  GMATGAAHGALTVEIVGGAAQQIPIAVVPFAQQGVIPGQQDTIANVIGADLRRSGLFRVL 77

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
                  + ++   +  +QDW ++ AQ L  G +     +RL+V FRL DV  + Q++G 
Sbjct: 78  ETRGVANQPSDISQV-NYQDWAAIQAQALTIGNIETLPGNRLKVSFRLLDVYKQSQLVGM 136

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           ++  +P+  R  AH I+D IYQ +TGE+G F +RI +VS+S   G  + +L V D DG N
Sbjct: 137 EYNITPSQLRLTAHKIADVIYQKLTGEQGVFATRIAYVSKS--GG--RYALQVADSDGYN 192

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + +  S + I+  P +SP+  K+AY +++ +  + +Y+  + +      + NF+    A
Sbjct: 193 PQTVVSSAEPII-SPVWSPDGTKLAYVSFEKKKPI-IYV-QSLVSGQRTVLANFKGNNSA 249

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +S +GKR  I +       IYS++      ++LT T  I+   ++SPD   I F SDR
Sbjct: 250 PAWSPDGKRLAIVLTHAANSQIYSINADGTGLQQLTRTTAIDTEPTWSPDGRYIYFTSDR 309

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            G  Q+Y M S+G +  R++   E SY   P  SP G  +A+ +  G +F + +      
Sbjct: 310 GGSPQIYRMPSSGGEASRMT--FEGSYVVSPRLSPDGKSLAYIRRDGGQFRVALQDLQTG 367

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDP 440
           Q ++L +    ++P+++P+GR L+ + +  G     L ++  +GR  + L  +     +P
Sbjct: 368 QVQVLSDGPKDESPSFAPNGRMLLHATRVGGR--GALAAVSADGRVKQRLSESGGDVREP 425

Query: 441 QW 442
            W
Sbjct: 426 AW 427


>gi|91776691|ref|YP_546447.1| TolB-like protein [Methylobacillus flagellatus KT]
 gi|91710678|gb|ABE50606.1| TolB-like protein [Methylobacillus flagellatus KT]
          Length = 415

 Score =  176 bits (447), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 119/417 (28%), Positives = 213/417 (51%), Gaps = 17/417 (4%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK---VSEVVSKDLQRSDVFNLISQDSF 87
           + H  + V         + IA   F     + G+   ++ V+  DL+RS +F ++     
Sbjct: 5   AAHGALTVEIVGGAAQQIPIAVVPFAQQGVIPGQQDTIANVIGADLRRSGLFRVLETRGV 64

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
             + ++   +  +QDW ++ AQ L  G +     +RL+V FRL DV  + Q++G ++  +
Sbjct: 65  ANQPSDISQV-NYQDWAAIQAQALTIGNIETLPGNRLKVSFRLLDVYKQSQLVGMEYNIT 123

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           P+  R  AH I+D IYQ +TGE+G F +RI +VS+S   G  + +L V D DG N + + 
Sbjct: 124 PSQLRLTAHKIADVIYQKLTGEQGVFATRIAYVSKS--GG--RYALQVADSDGYNPQTVV 179

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            S + I+  P +SP+  K+AY +++ +  + +Y+  + +      + NF+    AP +S 
Sbjct: 180 SSAEPII-SPVWSPDGTKLAYVSFEKKKPI-IYV-QSLVSGQRTVLANFKGNNSAPAWSP 236

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +GKR  I +       IYS++      ++LT T  I+   ++SPD   I F SDR G  Q
Sbjct: 237 DGKRLAIVLTHAANSQIYSINADGTGLQQLTRTTAIDTEPTWSPDGRYIYFTSDRGGSPQ 296

Query: 328 LYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +Y M S+G +  R++   E SY   P  SP G  +A+ +  G +F + +      Q ++L
Sbjct: 297 IYRMPSSGGEASRMT--FEGSYVVSPRLSPDGKSLAYIRRDGGQFRVALQDLQTGQVQVL 354

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
            +    ++P+++P+GR L+ + +  G     L ++  +GR  + L  +     +P W
Sbjct: 355 SDGPKDESPSFAPNGRMLLHATRVGGR--GALAAVSADGRVKQRLSESGGDVREPAW 409


>gi|118581723|ref|YP_902973.1| WD40 domain-containing protein [Pelobacter propionicus DSM 2379]
 gi|118504433|gb|ABL00916.1| WD-40 repeat-containing protein [Pelobacter propionicus DSM 2379]
          Length = 435

 Score =  176 bits (446), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 188/346 (54%), Gaps = 16/346 (4%)

Query: 100 FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS 159
           F  W   G  +LV G    +G D L VEFRL+D+ +RK +  +++       R+ AH+ +
Sbjct: 100 FNSWLKGGYDLLVRGEYSVKGDD-LTVEFRLFDLANRKMMTARRYLGKTKDLRRFAHSFA 158

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+I  ++TGE+G F + I FVS    SG     + +MD DG + R LT +   I   P F
Sbjct: 159 DEILLAMTGERGCFTTHIAFVS--TRSG--NKEIAIMDWDGHDTRQLTRNH-SINLNPDF 213

Query: 220 SPNQQKVAYATY--DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           SPN +++ + +Y   + D+ R  L  + ++ A   + +   + +   +S +G R  +++ 
Sbjct: 214 SPNGREIIFTSYKRHNPDLYRRPL-SSPVEVA---VSHREGLNITGAWSPDGSRIALALS 269

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           KD   +IY++    ++  RLT+   I IS ++SP+ SQI F SDR GK Q+++M ++G+ 
Sbjct: 270 KDGNSEIYTIARDGSSPVRLTSHPAIEISPTWSPNGSQIAFVSDRLGKPQIFIMNADGTG 329

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +R++ +      +P WSP+GD IA+ +  G  F I  +  +GS +  L    + + P W
Sbjct: 330 VRRLTTNG-GYNVNPRWSPKGDKIAYARMEGGGFQIHTINVNGSDDTQLTSSGSSENPAW 388

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQW 442
           SP GR + FS ++   +G ++Y +  +G  ET ++     ++ P W
Sbjct: 389 SPDGRLIAFSGRR--GSGDEIYVMRADGSGETRVSKVGGRSTQPAW 432


>gi|114319404|ref|YP_741087.1| TolB domain-containing protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|122941253|sp|Q0AC40|TOLB_ALHEH RecName: Full=Protein tolB; Flags: Precursor
 gi|114225798|gb|ABI55597.1| TolB, N-terminal domain protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 428

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 210/430 (48%), Gaps = 11/430 (2%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVS-IAFTKFVSIDELGGKVSEVVSKDLQ 74
            +C L +L+ G         + V        PV+ I F     I      ++ V+S +L 
Sbjct: 7   TVCTLALLLVGLQAAHADDIIDVIGGQEGAMPVAVIPFAVTGEIPTPDQDIARVISDNLA 66

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           RS  F ++ ++    +    D   RF  W +LG   LVTGR+  +G  R+ V F L DV 
Sbjct: 67  RSGRFEVLPREELVARPAGLDDT-RFSAWRALGMDYLVTGRMEMDGH-RVSVTFELLDVF 124

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
              +I G+++   P + R +AH ISD +++ + G  G F ++I +V     +    + L 
Sbjct: 125 RGNRIEGRRYRLHPDNLRSLAHAISDIVFEEVVGLPGVFGTQIAYVQVEERNDQRIHRLM 184

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V D DG   R +  SR Q +  P +SP + ++AY +++      +Y+ + R  +   RI 
Sbjct: 185 VADADGQRPREILESR-QPIMSPAWSPERDRLAYVSFEGGRS-EIYVQNLRSGQR-DRIA 241

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +FR +  AP +S +G+   +++ +D   +IY + L      RLT+   I+   ++SPD  
Sbjct: 242 SFRGINSAPAWSPDGRHLAVTLSRDGRANIYLLRLDDGHVRRLTDHWAIDTEPTFSPDGE 301

Query: 315 QIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +I F SDR G+ Q+Y +  NG    +R++ D + +   P WSP G  IA        F I
Sbjct: 302 RIAFTSDRGGRPQVYTLAVNGPGGVERVTFDGDYNA-RPNWSPDGRRIAMVHRHNGSFRI 360

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLIN 432
            V   +  + R+L +    ++P ++P+G  +++S    GD  S+L ++ ++GR N+ L  
Sbjct: 361 AVHDLESDRTRVLTDGPWDESPVFAPNGDMIMYSAGGSGD--SRLRTVSVHGRANQALPR 418

Query: 433 TPAYASDPQW 442
                 +P W
Sbjct: 419 AGGLTREPAW 428


>gi|300112858|ref|YP_003759433.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Nitrosococcus watsonii C-113]
 gi|299538795|gb|ADJ27112.1| Tol-Pal system beta propeller repeat protein TolB [Nitrosococcus
           watsonii C-113]
          Length = 428

 Score =  176 bits (445), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 223/434 (51%), Gaps = 12/434 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK-VSEVVSK 71
           MK+   +L + +      ++ A + +       + + IA   F    ++  + V+ V++ 
Sbjct: 1   MKVCFKILWLWMLMVAAQNVSAVLTIEITGGTEAALPIAIVPFQKEGKVPPEDVAAVIAA 60

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  F  + ++    +      I +FQDW  LG++ LV G+V   G DR  V F+L+
Sbjct: 61  DLARSGRFAPLPEEDLIARPHAASDI-QFQDWRRLGSEGLVIGKVSALGADRYEVSFQLF 119

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIK 190
           D+   +Q++G+++    A  R +AH I+D IY+++TGEKG F + I FV+ S    G  +
Sbjct: 120 DIYKAEQLVGRRYQVPAAGLRHLAHQIADLIYETLTGEKGFFTTHIAFVTVSRAAHGAKQ 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L V D DG N   +  S++ IL  P +SP+  ++AY +++      V++ + R  +  
Sbjct: 180 YALQVADVDGHNPHTILRSKEPIL-SPAWSPDGTQIAYVSFERRRS-EVFVQELRTGQR- 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + + +F  +  AP +S +G++  + + K+   +IY  DL ++   RLT+   I+    ++
Sbjct: 237 QSVASFPGINSAPAWSPDGRKLALVLSKEGNPEIYIRDLATDRLTRLTHNTAIDTEPVWA 296

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGE 369
           PD   IVF SDR G+ QLY +  +G   +R++   E +Y     ++P G  +A       
Sbjct: 297 PDGKSIVFTSDRGGQPQLYQVPVSGGQAQRLT--FEGAYNASASFAPNGRRLALIHGDKG 354

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NE 428
           +F I V+     + ++L +    ++P+++P+GR ++++    G  G  L ++  +GR  +
Sbjct: 355 QFHIAVLNLQSKELQVLTQTRMDESPSFAPNGRMILYA--TSGPQGGVLAAVSTDGRVRQ 412

Query: 429 TLINTPAYASDPQW 442
            L        +P W
Sbjct: 413 RLAQQGDEVREPAW 426


>gi|257095752|ref|YP_003169393.1| translocation protein TolB [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048276|gb|ACV37464.1| Tol-Pal system beta propeller repeat protein TolB [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 430

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 210/420 (50%), Gaps = 33/420 (7%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGK------VSEVVSKDLQRSDVFNLISQDSFKQ 89
           +++    AN  PV+IA        E GG+      V+ VV  DL+RS +F +I  D+   
Sbjct: 32  IEITGAGANRIPVAIA--------EFGGEASAARIVTSVVRADLERSGLFKMI--DTSGA 81

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
            +T   S P + +W S GA  L  G + +    R    FRL+DV     + G  F +S  
Sbjct: 82  AMTEA-STPAYDEWKSRGADALAAGSIGEGADGRKEARFRLYDVNKAGVLGGSAFVTSKP 140

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
             R   H I+D IY+ +TGE G F++R+ +V  +  S   +  L + D DG N +    S
Sbjct: 141 MLRATGHRIADIIYEKLTGEPGIFSTRVAYVVRASAS---RYELHIADADGQNAQVALIS 197

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAPRFSS 267
           ++ I+  P +SP+  ++AY +++++  + VY+       + KRI   NF+    AP +S 
Sbjct: 198 KEPII-SPSWSPDGGRLAYVSFENKKPI-VYVHSLA---SGKRIVAANFKGSNSAPAWSP 252

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G++  + + KD    I++V+   +  +RLT    IN   ++SPD   + F SDR G  Q
Sbjct: 253 DGRKLAVVLSKDGGSQIFTVNADGSGVQRLTTASAINTEPNFSPDGQYVYFTSDRGGSPQ 312

Query: 328 LYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +Y +   G D +R+S   E SY   P  SP G  +AF       F + VM     Q ++L
Sbjct: 313 IYRVGVGGGDAQRVS--FEGSYNVTPRLSPDGKSMAFISRRDGSFRLSVMDLASKQVQVL 370

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVGF 445
            +    ++P++SP+GR ++ + ++ G     L ++ ++GR +  ++  A    +P W  F
Sbjct: 371 TDSHKDESPSFSPNGRMILIATEQGGR--GVLSAVSIDGRIKQRLSISAGDVREPAWSPF 428


>gi|292490341|ref|YP_003525780.1| Tol-Pal system beta propeller repeat protein TolB [Nitrosococcus
           halophilus Nc4]
 gi|291578936|gb|ADE13393.1| Tol-Pal system beta propeller repeat protein TolB [Nitrosococcus
           halophilus Nc4]
          Length = 430

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 223/445 (50%), Gaps = 30/445 (6%)

Query: 11  LNMKI--NLCLLLVLIGGFFPT-SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
           + MK+   +  L +L+    PT ++ A + +       + + IA   F S    GG   E
Sbjct: 1   MGMKVWSKILWLWILL---VPTQNVSAVLTIEITGGTEAALPIAIVPFGS---QGGIPPE 54

Query: 68  ----VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
               VV+ DL RS  F  + +     +      I  F DW  LG++ LV G V   G DR
Sbjct: 55  DVAAVVAADLARSGRFAPLPEKDLLSRPHRASEI-EFHDWRRLGSEGLVIGEVTHLGADR 113

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
             V F+L+D+   +Q++G+++       R +AH I+D IY+++TGEKG F +RI FV+ S
Sbjct: 114 YGVRFQLFDIYKAEQLVGRRYQVPATGLRHLAHQIADLIYETLTGEKGAFTTRIAFVTVS 173

Query: 184 -VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             V G  + SL V D DG N   +  S++ I+  P +SP+  K+AY +++ +    V + 
Sbjct: 174 KAVDGAKEYSLQVADVDGHNPHTILQSKEPIM-SPVWSPDGTKLAYVSFERKRS-EVIVQ 231

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + R  R  + + +F  +  AP +S +G++  + + K+   +IY +DL +    RLT    
Sbjct: 232 ELRTGRR-QSVASFPGINSAPDWSPDGRKLALVLSKEGNPEIYILDLATRRLTRLTRNAS 290

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQG 358
           I+   +++PD   IVF SDR G+ QLY + ++G   +R++ D      AS+     +P G
Sbjct: 291 IDTEPTWAPDGRSIVFTSDRGGRPQLYQISASGGQAQRLTFDGTYNASASF-----APDG 345

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +A       +F I V+       ++L E    ++P+++P+GR ++++    G  G  L
Sbjct: 346 QRLALVHGDKGQFHIAVLDLASKDLQVLTETRMDESPSFAPNGRMILYA--TSGPQGGAL 403

Query: 419 YSIDLNGR-NETLINTPAYASDPQW 442
            ++  +GR  + L        +P W
Sbjct: 404 AAVSTDGRVRQRLAQKGDEVREPAW 428


>gi|313202059|ref|YP_004040717.1| tol-pal system beta propeller repeat-containing protein tolb
           [Methylovorus sp. MP688]
 gi|312441375|gb|ADQ85481.1| Tol-Pal system beta propeller repeat protein TolB [Methylovorus sp.
           MP688]
          Length = 412

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 199/398 (50%), Gaps = 16/398 (4%)

Query: 48  VSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP--RFQDWNS 105
           + IA   F         ++ VV  DL+RS +F ++     +  +  P  +P  ++ +W +
Sbjct: 23  IPIAVVPFAKTPGAQDDIATVVGADLRRSGLFRVLET---RGVVNQPHDLPEVKYPEWAA 79

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           + AQ L  G V      RL+V FRL DV  + Q+ G +F  + +  R  AH I+D IY+ 
Sbjct: 80  IQAQALTIGSVETLPGGRLKVSFRLLDVLKQNQLAGLEFNIAASQQRATAHKIADIIYEK 139

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +TGE G F++RI +++++      + +L V D DG N + +  S + ++  PR+SP+  K
Sbjct: 140 LTGEPGVFSTRIAYITKTAG----RYALQVADADGFNPQTVMSSNEPVI-SPRWSPDGTK 194

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +AY +Y+ +    +  + + +      + NF+    AP +S +G R  I +       +Y
Sbjct: 195 LAYVSYEKKK--PIVFVQSLVTGQRNVVANFKGNNSAPAWSPDGNRLAIVLTHSANSQVY 252

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            ++      ++LT T  I+    ++PD S I F S+R G  Q+Y M S G D KR++ D 
Sbjct: 253 VINADGTGLKQLTYTTSIDTEPVWTPDGSAIYFTSNRGGGPQIYRMASTGGDAKRVTFDG 312

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +   P  SP G  +A+ K    KF + V      Q ++L + +  ++P+++P+GR ++
Sbjct: 313 NYN-VSPRISPDGKTLAYIKQDNGKFRVAVQDVASGQVQVLSDTAQDESPSFAPNGRMIL 371

Query: 406 FSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           ++    G     L ++  +GR  + L  T     +P W
Sbjct: 372 YATSISGR--GALAAVSADGRVKQRLSETGGDVREPAW 407


>gi|254000100|ref|YP_003052163.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Methylovorus sp. SIP3-4]
 gi|253986779|gb|ACT51636.1| Tol-Pal system beta propeller repeat protein TolB [Methylovorus sp.
           SIP3-4]
          Length = 424

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 198/398 (49%), Gaps = 16/398 (4%)

Query: 48  VSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP--RFQDWNS 105
           + IA   F         ++ VV  DL+RS +F ++     +  +  P  +P  ++ +W +
Sbjct: 35  IPIAVVPFAKTPGAQDDIATVVGADLRRSGLFRVLET---RGVVNQPHDLPEVKYPEWAA 91

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           + AQ L  G V      RL+V FRL DV  + Q+ G +F  + +  R  AH I+D IY+ 
Sbjct: 92  IQAQALTIGSVETLPGGRLKVSFRLLDVLKQNQLAGLEFNIAASQQRATAHKIADIIYEK 151

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +TGE G F++RI +++++      + +L V D DG N + +  S + ++  PR+SP+  K
Sbjct: 152 LTGEPGVFSTRIAYITKTAG----RYALQVADADGFNPQTVMSSNEPVI-SPRWSPDGTK 206

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +AY +Y+ +    +  + + +      + NF+    AP +S +G R  I +       +Y
Sbjct: 207 LAYVSYEKKK--PIVFVQSLVTGQRNVVANFKGNNSAPAWSPDGNRLAIVLTHSANSQVY 264

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            ++      ++LT T  I+    ++PD S I F S R G  Q+Y M S G D KR++ D 
Sbjct: 265 VINADGTGLKQLTYTTSIDTEPVWTPDGSAIYFTSSRGGGPQIYRMASTGGDAKRVTFDG 324

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +   P  SP G  +A+ K    KF + V      Q ++L + +  ++P+++P+GR ++
Sbjct: 325 NYN-VSPRISPDGKTLAYIKQDNGKFRVAVQDVASGQVQVLSDTAQDESPSFAPNGRMIL 383

Query: 406 FSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           ++    G     L ++  +GR  + L  T     +P W
Sbjct: 384 YATSISGR--GALAAVSADGRVKQRLSETGGDVREPAW 419


>gi|77920565|ref|YP_358380.1| TolB protein [Pelobacter carbinolicus DSM 2380]
 gi|119371048|sp|Q3A097|TOLB_PELCD RecName: Full=Protein tolB; Flags: Precursor
 gi|77546648|gb|ABA90210.1| TolB protein [Pelobacter carbinolicus DSM 2380]
          Length = 443

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/425 (28%), Positives = 208/425 (48%), Gaps = 25/425 (5%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID-----ELGGKVS 66
            M+  + LL+ L+     T++ A V++   +     +++A T+ V +       +  ++ 
Sbjct: 13  TMRRFVTLLIALLC-LSATAVQAQVEI--RAPGQQTIAVANTQLVPLSGTPLPAIAAELH 69

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNP---DSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           +V++ DL+ S +F  +   +F      P    S   F  W  LGA++L+ G    +G +R
Sbjct: 70  DVMAADLELSGLFRQLDPAAFLDDARRPGLTSSRVDFNQWALLGAEILIKGGYQLQG-ER 128

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           L V+FRL+DV  R+ + G+++       R +AH  +D + +S+TG +G F+SRI ++   
Sbjct: 129 LLVDFRLYDVVHRRLLTGRRYAGLRRDVRTMAHKFADQVLKSVTGREGPFSSRIAYIDNR 188

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--DDEDILRVYL 241
                    L +MD DGAN   LT  R  I+  P FSPN ++V Y +Y   + D+ R  L
Sbjct: 189 TG----HKELYLMDTDGANALRLTDHR-SIVLNPDFSPNGREVIYTSYRRGNPDLYRKQL 243

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
              +      R+   + + +A RF  +G+   ++       ++  +    +   RLT+  
Sbjct: 244 STGQ----EARLAFKKGLNIAARFRPDGREIALTQSATGNPELMLLGTDGSRRRRLTSHW 299

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I++  S+SP   ++ F SDR+G   ++VM   G    R++ + + +   P WSP G  I
Sbjct: 300 GIDVDPSWSPAGDRLAFVSDRQGNPHIFVMDLLGGQTARLTANGKYNA-TPAWSPDGKRI 358

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           AFT+     F I  ++ DG+ ER L     N + P WSP  R L++S  +DG  G  +  
Sbjct: 359 AFTRLEKGVFDIYTVRPDGTDERRLTFGPGNKEHPRWSPDSRFLVYSSDQDGRKGIYIMR 418

Query: 421 IDLNG 425
            D  G
Sbjct: 419 ADGTG 423



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 81/165 (49%), Gaps = 4/165 (2%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L ++  DG+  R LT S   I  +P +SP   ++A+ + D +    +++MD    +  + 
Sbjct: 282 LMLLGTDGSRRRRLT-SHWGIDVDPSWSPAGDRLAFVS-DRQGNPHIFVMDLLGGQTARL 339

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
             N +     P +S +GKR   +  +    DIY+V        RLT          +SPD
Sbjct: 340 TANGKYNA-TPAWSPDGKRIAFTRLEKGVFDIYTVRPDGTDERRLTFGPGNKEHPRWSPD 398

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           S  +V+ SD++G++ +Y+M+++G+  +RIS         P WS Q
Sbjct: 399 SRFLVYSSDQDGRKGIYIMRADGTGIRRISAGGGQCQH-PAWSGQ 442


>gi|222054198|ref|YP_002536560.1| Tol-Pal system beta propeller repeat protein TolB [Geobacter sp.
           FRC-32]
 gi|221563487|gb|ACM19459.1| Tol-Pal system beta propeller repeat protein TolB [Geobacter sp.
           FRC-32]
          Length = 425

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 199/399 (49%), Gaps = 20/399 (5%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           PV ++ T    +D+    ++++ + DL  +  F ++     + +            W + 
Sbjct: 40  PVPLSGTHNAELDK---TITDIFAFDLTLAGQFTVMPSPPGETRTGIRSGEFDLAPWQAA 96

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           GA +LV    I  G   + +EFR +DV   K+++ K+F       RKI H  S++I  + 
Sbjct: 97  GANLLVKSGYIDNGAT-ITMEFRFFDVSRGKELVVKRFTGKRTDQRKIVHMFSNEILSAT 155

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           TGE G F  +  FVS    SG     + +MD DG N++ LT     I   P FSP+ +++
Sbjct: 156 TGETGPFTGKTAFVS--TASG--NKEIYLMDYDGYNVQRLT-KNGSINLNPDFSPSGKEL 210

Query: 227 AYATYD--DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            Y +Y   + D+ R  L+      A  RI +   + +   +S +G R  +++ KD   +I
Sbjct: 211 IYTSYKRRNPDLYRRELLTG----AEARISSHPGINVTGAWSPDGTRIALAMSKDGNSEI 266

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           Y++        RLT    I++S ++SPD S+I F SDR GK Q++VM ++GS   R++  
Sbjct: 267 YTISKDGKQVVRLTKNEAIDVSPAWSPDGSRIAFVSDRLGKPQIFVMNADGSHVTRLTTS 326

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
              +   P WSP+G+ IA+ +  G  F I V+  DGS +  L  D + + P WSP GR +
Sbjct: 327 GTYN-VSPRWSPKGNTIAYCRQEG-GFQIHVINVDGSNDIKLTSDGSNEHPRWSPDGRFI 384

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQW 442
           +FS  + G  G  +Y +  +G  +  ++  + A S P W
Sbjct: 385 VFSSSRAGKEG--IYVMRNDGTGQVRVSRGSSADSHPTW 421


>gi|188577428|ref|YP_001914357.1| translocation protein TolB [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|226705899|sp|B2STJ5|TOLB_XANOP RecName: Full=Protein tolB; Flags: Precursor
 gi|188521880|gb|ACD59825.1| Tol-Pal system beta propeller repeat protein TolB [Xanthomonas
           oryzae pv. oryzae PXO99A]
          Length = 439

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 220/450 (48%), Gaps = 38/450 (8%)

Query: 13  MKINLCLLLVLIGGFFPTSIHA-----FVKVATNSANYSPVSIAFTKFVSIDELGGK-VS 66
           MK  L  L  L     P S  A      + +   SA+ +P+++    +   D      VS
Sbjct: 1   MKKPLRWLAALTVLLLPLSALAQQQGLTIDIVGGSASATPIAVIPMPYQGSDTAPQTDVS 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F  +      +K T    + +FQ W +L    +V GRV+  G+   RV
Sbjct: 61  AVVGADLDRSGQFRTLPAAQIVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMDAGEGAYRV 119

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E+ L+DV   ++++G    +   + R ++H ++D IY+ ITG +G F +RI +V+ S   
Sbjct: 120 EYELFDVAKGERMLGLAMTARANAMRDVSHQMADAIYEKITGVRGAFWTRIAYVTASGKG 179

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G ++ +L V D DG N + +  S + +L  P +SP+ +K+AY +++  +   +YL D   
Sbjct: 180 GAMRYALMVADSDGYNPQTIVRSAEPLL-SPNWSPDGKKLAYVSFERGNS-SIYLQDIAT 237

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             A + + +FR +  AP FS +G+R  +++ +    +IY +DL S    +LTN   I+  
Sbjct: 238 G-ARELVSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGIDTE 296

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +++PD   I F SDR G+ Q+Y + ++G    R++   + +Y         +  A   F
Sbjct: 297 PTWAPDGGSIYFTSDRGGRPQIYQVAASGGSANRVT--FQGNY---------NATASVSF 345

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----------SPS---GRSLIFSRKKDGD 413
            G+K A  V +  G+  R+ + D +L +P+W          SPS     S++    ++G 
Sbjct: 346 DGKKIA--VAQGSGNTYRIAMMDRSLGSPSWSTLSPGSLDESPSFAPNASMVLYAAREGG 403

Query: 414 TGSKLYSIDLNGR-NETLINTPAYASDPQW 442
            G  LY++  + R  + L+       +P W
Sbjct: 404 RG-VLYAVSSDARVRQRLVLADGDVREPAW 432


>gi|255020130|ref|ZP_05292200.1| tolB protein precursor, periplasmic protein involved in the
           tonb-independent uptake of group A colicins
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970423|gb|EET27915.1| tolB protein precursor, periplasmic protein involved in the
           tonb-independent uptake of group A colicins
           [Acidithiobacillus caldus ATCC 51756]
          Length = 424

 Score =  169 bits (428), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 216/438 (49%), Gaps = 24/438 (5%)

Query: 13  MKINLCLLLVLIG-GFF--PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           M   L +LL+  G GFF  P +  A     T S + S + IA   F         V++V+
Sbjct: 1   MARRLWILLLTFGLGFFWNPAAQAALTVDVTKSVS-SALPIAIPSFGPGLPGQPSVADVI 59

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
             DL  S +F +++  S+      P  + +   W+ +GA  L  G   KE      V+  
Sbjct: 60  RSDLSHSGLFRVLAPGSYPGDPHQPIEV-KASSWSGIGATGLAIGDTQKEANGNYVVQVY 118

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           +++V+  +++  +++  SPA     AH ++D IY++ TG+ G F +RI +V +      I
Sbjct: 119 VYNVQTGQELAARRYTCSPAELHMTAHHVADLIYKTFTGKAGPFAARIAYVRQ------I 172

Query: 190 KN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
            N  +L V + DG N   +   R  + F P +SP+ +++AY TY D   + +Y+ D    
Sbjct: 173 GNEYTLLVAESDGWNPHPVVRGRMPV-FSPVWSPDNRRLAYVTYHDARAI-IYVQDLATG 230

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  + +     ++ AP FS +G+    +  +  A +I+ VDL +    +LT+   IN S 
Sbjct: 231 QR-QAVAPAGEIVSAPAFSPDGRELAYARAEGGATNIFVVDLATGQRRQLTHGSAINTSP 289

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTK 365
           S++PD   +VF SDR G  Q+Y M S+G D  R+  S +  AS   PV+SP G  IAF  
Sbjct: 290 SWAPDGRHLVFVSDRAGSPQIYSMDSDGGDVHRLTFSGNYNAS---PVYSPTGQDIAFIH 346

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +   +A+ VM+ DGS  R+L    N   P+++ +G+ +++  ++ G     L    ++G
Sbjct: 347 RTDGVYALAVMRADGSGMRVLDAQGNCDHPSFAGNGQMILYGTQRGGR--KVLAEASVDG 404

Query: 426 RN-ETLINTPAYASDPQW 442
           +    L  T    S P W
Sbjct: 405 KTLAVLRGTAGEDSQPAW 422


>gi|58581291|ref|YP_200307.1| translocation protein TolB [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58425885|gb|AAW74922.1| TolB protein [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 461

 Score =  169 bits (428), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 128/458 (27%), Positives = 223/458 (48%), Gaps = 38/458 (8%)

Query: 5   FFIAEELNMKINLCLLLVLIGGFFPTSIHA-----FVKVATNSANYSPVSIAFTKFV-SI 58
           F    E +MK  L  L  L     P S  A      + +   SA+ +P+++    +  S 
Sbjct: 15  FPARSEPSMKKPLRWLAALTVLLLPLSALAQQQGLTIDIVGGSASATPIAVIPMPYQGSG 74

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
                 VS VV  DL RS  F  +      +K T    + +FQ W +L    +V GRV+ 
Sbjct: 75  TAPQTDVSAVVGADLDRSGQFRTLPAAQIVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMD 133

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
            G+   RVE+ L+DV   ++++G    +   + R ++H ++D IY+ ITG +G F +RI 
Sbjct: 134 AGEGAYRVEYELFDVAKGERMLGLAMTARANAMRDVSHQMADAIYEKITGVRGAFWTRIA 193

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +V+ S   G ++ +L V D DG N + +  S + +L  P +SP+ +K+AY +++  +   
Sbjct: 194 YVTASGKGGAMRYALMVADSDGYNPQTIVRSAEPLL-SPNWSPDGKKLAYVSFERGNS-S 251

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +YL D     A + + +FR +  AP FS +G+R  +++ +    +IY +DL S    +LT
Sbjct: 252 IYLQDIATG-ARELVSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLT 310

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           N   I+   +++PD   I F SDR G+ Q+Y + ++G    R++   + +Y         
Sbjct: 311 NHFGIDTEPTWAPDGGSIYFTSDRGGRPQIYQVAASGGSANRVT--FQGNY--------- 359

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----------SPS---GRSLI 405
           +  A   F G+K A  V +  G+  R+ + D +L +P+W          SPS     S++
Sbjct: 360 NATASVSFDGKKIA--VAQGSGNTYRIAMMDRSLGSPSWSTLSPGSLDESPSFAPNASMV 417

Query: 406 FSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
               ++G  G  LY++  + R  + L+       +P W
Sbjct: 418 LYAAREGGRG-VLYAVSSDARVRQRLVLADGDVREPAW 454


>gi|171058627|ref|YP_001790976.1| translocation protein TolB [Leptothrix cholodnii SP-6]
 gi|170776072|gb|ACB34211.1| Tol-Pal system beta propeller repeat protein TolB [Leptothrix
           cholodnii SP-6]
          Length = 427

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 209/418 (50%), Gaps = 15/418 (3%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           T+  A  +V  +    + V IA  +    D+    VS +V  DL+RS +F  +   +   
Sbjct: 21  TASRAQFRVEISGVGATQVPIAVLRLRDEDKAPQPVSAIVRADLERSGLFRSVEPGNVAH 80

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
             T   S P F DW SLG+  LV G V +    R  V +RLWDV    ++  +    +  
Sbjct: 81  DET---SRPVFSDWRSLGSDALVAGSVTRLADARFDVRYRLWDVVKGSELAAQALSVAKD 137

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
             R  AH I+DD+YQ +TGE+G F++RI +VS++      + +L V D DG N +     
Sbjct: 138 DLRLAAHRIADDVYQKLTGERGVFSTRIAYVSKAA----NRYTLWVADADGENAQAAVGG 193

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            + I+  P +SPN +++AY +++    + VY+ D    +  + I N++    AP +S +G
Sbjct: 194 PEPII-SPAWSPNGRELAYVSFEARKAV-VYVQDVLTSKR-RVIANYKGSNSAPAWSPDG 250

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            + ++++ +D    +Y++        RLT +  I+  A++SPD   + F SDR G  Q+Y
Sbjct: 251 NQLVVTLTRDGLSQLYTMSRTGGDLRRLTTSSGIDTEAAWSPDGKSVYFVSDRGGGPQIY 310

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVE 388
            + + G + +R++     +   P  SP G  +A+ ++ +G  F + +M+        L +
Sbjct: 311 RVAAGGGNAERVTFAGNYN-ISPALSPDGRYMAYVSRLNGSAFRLTLMELATGTITTLTD 369

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGF 445
            ++ ++P ++P+ R +I++ +  G     L +  L+G  +  +  P A   +P W  F
Sbjct: 370 TNDDESPGFAPNSRLIIYATRAGGR--DVLMTTTLDGSIKARLGAPQADVREPTWGPF 425


>gi|84623209|ref|YP_450581.1| translocation protein TolB [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|119371067|sp|Q2P570|TOLB_XANOM RecName: Full=Protein tolB; Flags: Precursor
 gi|84367149|dbj|BAE68307.1| TolB protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 439

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 200/392 (51%), Gaps = 32/392 (8%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           VS VV  DL RS  F  +      +K T    + +FQ W +L    +V GRV+  G+   
Sbjct: 59  VSAVVGADLDRSGQFRTLPAAQIVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMNAGEGAY 117

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RVE+ L+DV   ++++G    +   + R ++H ++D IY+ ITG +G F +RI +V+ S 
Sbjct: 118 RVEYELFDVAKGERMLGLAMTARANAMRDVSHQMADAIYEKITGVRGAFWTRIAYVTASG 177

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G ++ +L V D DG N + +  S + +L  P +SP+ +K+AY +++  +   +YL D 
Sbjct: 178 KGGAMRYALMVADSDGYNPQTIVRSAEPLL-SPNWSPDGKKLAYVSFERGNS-SIYLQDI 235

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               A + + +FR +  AP FS +G+R  +++ +    +IY +DL S    +LTN   I+
Sbjct: 236 ATG-ARELVSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGID 294

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +++PD   I F SDR G+ Q+Y + ++G    R++   + +Y         +  A  
Sbjct: 295 TEPTWAPDGGSIYFTSDRGGRPQIYQVAASGGSANRVT--FQGNY---------NATASV 343

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----------SPS---GRSLIFSRKKD 411
            F G+K A  V +  G+  R+ + D +L +P+W          SPS     S++    ++
Sbjct: 344 SFDGKKIA--VAQGSGNTYRIAMMDRSLGSPSWSTLSPGSLDESPSFAPNASMVLYAARE 401

Query: 412 GDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           G  G  LY++  + R  + L+       +P W
Sbjct: 402 GGRG-VLYAVSSDARVRQRLVLADGDVREPAW 432


>gi|21232448|ref|NP_638365.1| translocation protein TolB [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767469|ref|YP_242231.1| translocation protein TolB [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188990575|ref|YP_001902585.1| translocation protein TolB [Xanthomonas campestris pv. campestris
           str. B100]
 gi|32699705|sp|Q8P6F2|TOLB_XANCP RecName: Full=Protein tolB; Flags: Precursor
 gi|81306551|sp|Q4UXL2|TOLB_XANC8 RecName: Full=Protein tolB; Flags: Precursor
 gi|226705898|sp|B0RPZ2|TOLB_XANCB RecName: Full=Protein tolB; Flags: Precursor
 gi|21114229|gb|AAM42289.1| TolB protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66572801|gb|AAY48211.1| TolB protein [Xanthomonas campestris pv. campestris str. 8004]
 gi|167732335|emb|CAP50527.1| TolB protein [Xanthomonas campestris pv. campestris]
          Length = 439

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 201/392 (51%), Gaps = 32/392 (8%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           VS VVS DL RS  F  +      +K T    + +FQ W +L    +V GRV+  G+   
Sbjct: 59  VSAVVSADLDRSGQFRTLPAAQIVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMDAGEGAY 117

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RVE+ L+DV   ++++G    +   + R ++H ++D IY+ +TG +G F +RI +V+ S 
Sbjct: 118 RVEYELFDVAKGERLLGLAMTARANAMRDVSHQMADAIYEKVTGVRGAFWTRIAYVTASG 177

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G ++ +L V D DG N + +  S + +L  P +SP+ +K+AY +++  +   +YL D 
Sbjct: 178 SGGSMRYALMVADSDGYNPQTIVRSAEPLL-SPNWSPDGKKLAYVSFERGNS-SIYLQDI 235

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               A + + +FR +  AP FS +G+R  +++ +    +IY +DL S    +LTN   I+
Sbjct: 236 -ASGARELVSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGID 294

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +++PD   I F SDR G+ Q+Y + ++G    R++   + +Y         +  A  
Sbjct: 295 TEPTWAPDGGSIYFTSDRGGRPQIYQVAASGGSANRVT--FQGNY---------NATASV 343

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----------SPS---GRSLIFSRKKD 411
            F G+K A  V +  G+  R+ + D +L +P+W          SPS     S++    ++
Sbjct: 344 SFDGKKVA--VAQGSGNTYRIAMMDRSLGSPSWSTLSPGSLDESPSFAPNASMVLYAARE 401

Query: 412 GDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           G  G  LY++  + R  + L+       +P W
Sbjct: 402 GGRG-VLYAVSADARVRQRLVLADGDVREPAW 432


>gi|218679309|ref|ZP_03527206.1| translocation protein TolB [Rhizobium etli CIAT 894]
          Length = 196

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 83/190 (43%), Positives = 124/190 (65%), Gaps = 7/190 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSI-----HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
           +K +L   LV+  G    ++     +A V++  N  N  P+ IA T F    ++G +VS+
Sbjct: 9   VKCSLIRALVVAVGMTAAAVVSSPANARVEININKGNIQPLPIAVTDFQG--DMGAQVSQ 66

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V++ DLQRS +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV KE   RLR E
Sbjct: 67  VIAADLQRSGLFAPINKTAFIEKISNPDASPRFEDWKVINAQALVTGRVTKEADGRLRAE 126

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           FRLWD    +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES    
Sbjct: 127 FRLWDTFAGQQMAGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQ 186

Query: 188 IIKNSLCVMD 197
             K  L +MD
Sbjct: 187 QRKRQLAIMD 196


>gi|67461877|sp|Q5H299|TOLB_XANOR RecName: Full=Protein tolB; Flags: Precursor
          Length = 439

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 200/392 (51%), Gaps = 32/392 (8%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           VS VV  DL RS  F  +      +K T    + +FQ W +L    +V GRV+  G+   
Sbjct: 59  VSAVVGADLDRSGQFRTLPAAQIVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMDAGEGAY 117

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RVE+ L+DV   ++++G    +   + R ++H ++D IY+ ITG +G F +RI +V+ S 
Sbjct: 118 RVEYELFDVAKGERMLGLAMTARANAMRDVSHQMADAIYEKITGVRGAFWTRIAYVTASG 177

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G ++ +L V D DG N + +  S + +L  P +SP+ +K+AY +++  +   +YL D 
Sbjct: 178 KGGAMRYALMVADSDGYNPQTIVRSAEPLL-SPNWSPDGKKLAYVSFERGNS-SIYLQDI 235

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               A + + +FR +  AP FS +G+R  +++ +    +IY +DL S    +LTN   I+
Sbjct: 236 ATG-ARELVSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGID 294

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +++PD   I F SDR G+ Q+Y + ++G    R++   + +Y         +  A  
Sbjct: 295 TEPTWAPDGGSIYFTSDRGGRPQIYQVAASGGSANRVT--FQGNY---------NATASV 343

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----------SPS---GRSLIFSRKKD 411
            F G+K A  V +  G+  R+ + D +L +P+W          SPS     S++    ++
Sbjct: 344 SFDGKKIA--VAQGSGNTYRIAMMDRSLGSPSWSTLSPGSLDESPSFAPNASMVLYAARE 401

Query: 412 GDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           G  G  LY++  + R  + L+       +P W
Sbjct: 402 GGRG-VLYAVSSDARVRQRLVLADGDVREPAW 432


>gi|258591276|emb|CBE67573.1| Protein tolB precursor [NC10 bacterium 'Dutch sediment']
          Length = 450

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 208/397 (52%), Gaps = 32/397 (8%)

Query: 48  VSIAFTKFVSI------DELGGKVSEVVSKDLQRSDVFNLI---------SQDSFKQKIT 92
           ++IA   F S+      ++LG +   +++ DL+ + +F++I         +Q  F Q+  
Sbjct: 41  ITIAVVGFPSLKAISKGEDLGAQAGAILTDDLKNTGIFDVIDPSFLPVEAAQVGFGQE-- 98

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
               +P     NSL  Q +V G++   G D L VE +L++V + + + GK++   P + R
Sbjct: 99  -KGLLPAL---NSLKVQAVVVGKLSSRG-DELVVEGQLFEVTNGEMLSGKRYAGDPRTLR 153

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
            + H ++D+I   +TGEKG  +S+I +VS   V+G     + VMD D  N   +T     
Sbjct: 154 AMVHRLADEIVFRLTGEKGIASSKIAYVSS--VNG--AKEIYVMDYDAYNPLLIT-GNHS 208

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           I   PR+SP+ +K+AY +Y D +   ++++D    R  ++I +   + +AP +S NGK  
Sbjct: 209 INLSPRWSPDGKKIAYTSYRDHNP-DLFVVDLETGRR-QKISSNPGLNVAPAWSPNGKWL 266

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           + S+      +++ +   +    +LT    I+IS S++P+  QIVF SDR G  Q+Y+M 
Sbjct: 267 VFSMSSGTGTNLFLIRPDATGLRQLTQGPHIDISPSFAPNGRQIVFSSDRGGTPQIYLMD 326

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-N 391
             G++ +R++         P WSP+GD I F   +   F I ++  DG+    L  +S N
Sbjct: 327 VEGTNIRRLTFGVGDYSVSPRWSPRGDKITFVGRTRGSFDIFLINPDGTGLTQLTSNSRN 386

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            + P+WS  GR L+F+  ++G     LY +  +G ++
Sbjct: 387 NEEPSWSADGRHLLFTSTRNGH--RHLYVMKADGSDQ 421



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 12/186 (6%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           N + L  S S  +G    +L ++  D   +R LT     I   P F+PN +++ +++ D 
Sbjct: 262 NGKWLVFSMSSGTG---TNLFLIRPDATGLRQLTQG-PHIDISPSFAPNGRQIVFSS-DR 316

Query: 234 EDILRVYLMD---TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               ++YLMD   T I R    +G++    ++PR+S  G +     +   + DI+ ++  
Sbjct: 317 GGTPQIYLMDVEGTNIRRLTFGVGDYS---VSPRWSPRGDKITFVGRTRGSFDIFLINPD 373

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                +LT+    N   S+S D   ++F S R G   LYVM+++GSDQ++++++ + +Y 
Sbjct: 374 GTGLTQLTSNSRNNEEPSWSADGRHLLFTSTRNGHRHLYVMKADGSDQRQLTKNGQENYL 433

Query: 351 DPVWSP 356
              WSP
Sbjct: 434 AD-WSP 438



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 83/165 (50%), Gaps = 6/165 (3%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A +IY +D  +     +T    IN+S  +SPD  +I + S R+    L+V+      +++
Sbjct: 187 AKEIYVMDYDAYNPLLITGNHSINLSPRWSPDGKKIAYTSYRDHNPDLFVVDLETGRRQK 246

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSP 399
           IS +   +   P WSP G  + F+  SG    + +++ D +  R L +  ++  +P+++P
Sbjct: 247 ISSNPGLN-VAPAWSPNGKWLVFSMSSGTGTNLFLIRPDATGLRQLTQGPHIDISPSFAP 305

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRN--ETLINTPAYASDPQW 442
           +GR ++FS  + G    ++Y +D+ G N          Y+  P+W
Sbjct: 306 NGRQIVFSSDRGGT--PQIYLMDVEGTNIRRLTFGVGDYSVSPRW 348


>gi|294626856|ref|ZP_06705448.1| translocation protein TolB precursor [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294665411|ref|ZP_06730699.1| translocation protein TolB precursor [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292598870|gb|EFF43015.1| translocation protein TolB precursor [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292604822|gb|EFF48185.1| translocation protein TolB precursor [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 439

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 200/392 (51%), Gaps = 32/392 (8%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           VS VV  DL RS  F  +      +K T    + +FQ W +L    +V GRV+  G+   
Sbjct: 59  VSAVVGADLDRSGQFRTLPAAQIVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMDAGEGAY 117

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RVE+ L+DV   ++++G    +   + R ++H ++D IY+ ITG +G F +RI +V+ S 
Sbjct: 118 RVEYELFDVAKGERLLGLAMTARANAMRDVSHQMADAIYEKITGVRGAFWTRIAYVTASG 177

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G ++ +L V D DG N + +  S + +L  P +SP+ +K+AY +++  +   +YL D 
Sbjct: 178 KGGAMRYALMVADSDGYNPQTIVRSAEPLL-SPNWSPDGKKLAYVSFERGNS-SIYLQDI 235

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               A + + +FR +  AP FS +G+R  +++ +    +IY +DL S    +LTN   I+
Sbjct: 236 ATG-ARELVSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGID 294

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +++PD   I F SDR G+ Q+Y + ++G    R++   + +Y         +  A  
Sbjct: 295 TEPTWAPDGGSIYFTSDRGGRPQIYQVAASGGSANRVT--FQGNY---------NATASV 343

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----------SPS---GRSLIFSRKKD 411
            F G+K A  V +  G+  R+ + D +L +P+W          SPS     S++    ++
Sbjct: 344 SFDGKKIA--VAQGSGNTYRIAMMDRSLGSPSWSTLSPGSLDESPSFAPNASMVLYAARE 401

Query: 412 GDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           G  G  LY++  + R  + L+       +P W
Sbjct: 402 GGRG-VLYAVSSDARVRQRLVLADGDVREPAW 432


>gi|289661909|ref|ZP_06483490.1| translocation protein TolB [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289667000|ref|ZP_06488075.1| translocation protein TolB [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 439

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 199/392 (50%), Gaps = 32/392 (8%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           VS VV  DL RS  F  +      +K T    + +FQ W +L    +V GRV+  G    
Sbjct: 59  VSAVVGADLDRSGQFRTLPAAQIVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMDAGDGAY 117

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RVE+ L+DV   ++++G    +   + R ++H ++D IY+ ITG +G F +RI +V+ S 
Sbjct: 118 RVEYELFDVAKGERMLGLAMTARANAMRDVSHQMADAIYEKITGVRGAFWTRIAYVTASG 177

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G ++ +L V D DG N + +  S + +L  P +SP+ +K+AY +++  +   +YL D 
Sbjct: 178 KGGAMRYALMVADSDGYNPQTIVRSAEPLL-SPNWSPDGKKLAYVSFERGNS-SIYLQDI 235

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               A + + +FR +  AP FS +G+R  +++ +    +IY +DL S    +LTN   I+
Sbjct: 236 ATG-ARELVSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGID 294

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +++PD   I F SDR G+ Q+Y + ++G    R++   + +Y         +  A  
Sbjct: 295 TEPTWAPDGGSIYFTSDRGGRPQIYQVSASGGSANRVT--FQGNY---------NATASV 343

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----------SPS---GRSLIFSRKKD 411
            F G+K A  V +  G+  R+ + D +L +P+W          SPS     S++    ++
Sbjct: 344 SFDGKKIA--VAQGSGNSYRIAMMDRSLGSPSWSTLSPGSLDESPSFAPNASMVLYAARE 401

Query: 412 GDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           G  G  LY++  + R  + L+       +P W
Sbjct: 402 GGRG-VLYAVSSDARVRQRLVLADGDVREPAW 432


>gi|21243868|ref|NP_643450.1| translocation protein TolB [Xanthomonas axonopodis pv. citri str.
           306]
 gi|78048828|ref|YP_365003.1| translocation protein TolB [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325929357|ref|ZP_08190487.1| tol-pal system beta propeller repeat protein TolB [Xanthomonas
           perforans 91-118]
 gi|32699706|sp|Q8PHV7|TOLB_XANAC RecName: Full=Protein tolB; Flags: Precursor
 gi|119371066|sp|Q3BQG0|TOLB_XANC5 RecName: Full=Protein tolB; Flags: Precursor
 gi|21109469|gb|AAM37986.1| TolB protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|78037258|emb|CAJ25003.1| biopolymer transport TolB protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325540269|gb|EGD11881.1| tol-pal system beta propeller repeat protein TolB [Xanthomonas
           perforans 91-118]
          Length = 439

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 200/392 (51%), Gaps = 32/392 (8%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           VS VV  DL RS  F  +      +K T    + +FQ W +L    +V GRV+  G+   
Sbjct: 59  VSAVVGADLDRSGQFRTLPAAQIVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMDAGEGAY 117

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RVE+ L+DV   ++++G    +   + R ++H ++D IY+ ITG +G F +RI +V+ S 
Sbjct: 118 RVEYELFDVAKGERMLGLAMTARANAMRDVSHQMADAIYEKITGVRGAFWTRIAYVTASG 177

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G ++ +L V D DG N + +  S + +L  P +SP+ +K+AY +++  +   +YL D 
Sbjct: 178 KGGAMRYALMVADSDGYNPQTIVRSAEPLL-SPNWSPDGKKLAYVSFERGNS-SIYLQDI 235

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               A + + +FR +  AP FS +G+R  +++ +    +IY +DL S    +LTN   I+
Sbjct: 236 ATG-ARELVSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGID 294

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +++PD   I F SDR G+ Q+Y + ++G    R++   + +Y         +  A  
Sbjct: 295 TEPTWAPDGGSIYFTSDRGGRPQIYQVAASGGSANRVT--FQGNY---------NATASV 343

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----------SPS---GRSLIFSRKKD 411
            F G+K A  V +  G+  R+ + D +L +P+W          SPS     S++    ++
Sbjct: 344 SFDGKKIA--VAQGSGNTYRIAMMDRSLGSPSWSTLSPGSLDESPSFAPNASMVLYAARE 401

Query: 412 GDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           G  G  LY++  + R  + L+       +P W
Sbjct: 402 GGRG-VLYAVSSDARVRQRLVLADGDVREPAW 432


>gi|166712983|ref|ZP_02244190.1| translocation protein TolB [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 439

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 200/392 (51%), Gaps = 32/392 (8%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           VS VV  DL RS  F  +      +K T    + +FQ W +L    +V GRV+  G+   
Sbjct: 59  VSAVVGADLDRSGQFRTLPAAQIVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMDAGEGAY 117

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RVE+ L+DV   ++++G    +   + R ++H ++D IY+ ITG +G F +RI +V+ S 
Sbjct: 118 RVEYELFDVAKGERMLGLAMTARANAMRDVSHQMADAIYEKITGVRGAFWTRIAYVTASG 177

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G ++ +L V D DG N + +  S + +L  P +SP+ +K+AY +++  +   +YL D 
Sbjct: 178 KGGAMRYALMVADSDGYNPQTIVRSAEPLL-SPNWSPDGKKLAYVSFERGNS-SIYLQDI 235

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               A + + +FR +  AP FS +G+R  +++ +    +IY +DL S    +LTN   I+
Sbjct: 236 ATG-ARELVSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGID 294

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +++PD   I F SDR G+ Q+Y + ++G    R++   + +Y         +  A  
Sbjct: 295 TEPTWAPDGGSIYFTSDRGGRPQIYQVAASGGSANRVT--FQGNY---------NATASV 343

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----------SPS---GRSLIFSRKKD 411
            F G+K A  V +  G+  R+ + D +L +P+W          SPS     S++    ++
Sbjct: 344 SFDGKKIA--VAQGSGNTYRIAMVDRSLGSPSWSTLSPGSLDESPSFAPNASMVLYAARE 401

Query: 412 GDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           G  G  LY++  + R  + L+       +P W
Sbjct: 402 GGRG-VLYAVSSDARVRQRLVLADGDVREPAW 432


>gi|226945713|ref|YP_002800786.1| translocation protein TolB [Azotobacter vinelandii DJ]
 gi|226720640|gb|ACO79811.1| Beta propeller TolB [Azotobacter vinelandii DJ]
          Length = 430

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 208/411 (50%), Gaps = 10/411 (2%)

Query: 38  VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI 97
           V + +A  +P+++    +     +   ++E+V  DL+ S VF  I + +   + T P  I
Sbjct: 27  VTSGTARATPIAVVPFGWQGGSVMSDDMAEIVGNDLRNSGVFEPIPRQNMISQPTGPGEI 86

Query: 98  PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHT 157
             ++DWN+LGAQ ++ G ++  G  RL+V++ L +V   +Q++      S    R +AH 
Sbjct: 87  -IYRDWNALGAQYVLVGNIVPAG-GRLQVQYALMNVATEQQVLAGSVSGSGDQVRDMAHY 144

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           I+D  ++ +TG KG F++R+L+V+   + G  + +L   D DGA    L  SR+ IL  P
Sbjct: 145 IADQAFEKLTGIKGAFSTRLLYVTAERMGGGTRYTLQRADYDGARAVILLQSREPIL-SP 203

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           RF+P+ +++AY +++ +   R+++      R  ++I NF  +  AP FS +G R    + 
Sbjct: 204 RFAPDGRRIAYVSFEQKRP-RIFIQHIDTGRR-EQITNFEGLNGAPAFSPDGSRLAFVLS 261

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           KD   +IY ++L S   +R+TN   I+    +  D   + F SDR GK Q+Y  Q+ G  
Sbjct: 262 KDGNPEIYVMNLASRQLQRVTNHFGIDTEPFWGADGQTLYFTSDRAGKPQIY-RQTIGGG 320

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +R+S     +    + + +  L+   +  G   F +          R+L + S  ++PT
Sbjct: 321 AERVSFVGNYNANPKLSADEKTLVMIHRQDGYTNFKVAAQDLQRGTLRVLSDTSLDESPT 380

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFM 446
            +P+G  LI++ +  G     L SI  NGR    + T      +P W  ++
Sbjct: 381 VAPNGTMLIYATRHQGRGVLMLASI--NGRVRLPLPTAQGEVREPSWSPYL 429


>gi|325923403|ref|ZP_08185068.1| tol-pal system beta propeller repeat protein TolB [Xanthomonas
           gardneri ATCC 19865]
 gi|325546118|gb|EGD17307.1| tol-pal system beta propeller repeat protein TolB [Xanthomonas
           gardneri ATCC 19865]
          Length = 439

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 200/392 (51%), Gaps = 32/392 (8%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           V+ VV  DL RS  F  +      +K T    + +FQ W +L    +V GRV+  G+   
Sbjct: 59  VAAVVGADLDRSGQFRTLPAAQIVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMDAGEGAY 117

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RVE+ L+DV   ++++G    +   + R ++H ++D IY+ ITG +G F +RI +V+ S 
Sbjct: 118 RVEYELFDVAKGERLLGLAMTARANAMRDVSHQMADAIYEKITGVRGAFWTRIAYVTASG 177

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G ++ +L V D DG N + +  S + +L  P +SP+ +K+AY +++  +   +YL D 
Sbjct: 178 SGGSMRFALMVADSDGYNPQTIVRSAEPLL-SPNWSPDGKKLAYVSFERGNS-SIYLQDI 235

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               A + + +FR +  AP FS +G+R  +++ +    +IY +DL S    +LTN   I+
Sbjct: 236 STG-ARELVSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGID 294

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +++PD   I F SDR G+ Q+Y + ++G    R++   + +Y         +  A  
Sbjct: 295 TEPTWAPDGGSIYFTSDRGGRPQIYQVAASGGSANRVT--FQGNY---------NATASV 343

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----------SPS---GRSLIFSRKKD 411
            F G+K A  V +  G+  R+ + D +L +P+W          SPS     S+I    ++
Sbjct: 344 SFDGKKVA--VAQGSGNTYRIAMMDRSLGSPSWSTISPGSLDESPSFAPNASMILYAARE 401

Query: 412 GDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           G  G  LY++  + R  + L+       +P W
Sbjct: 402 GGRG-VLYAVSSDARVRQRLVLADGDVREPAW 432


>gi|300310549|ref|YP_003774641.1| periplasmic component of the Tol biopolymer transport system
           protein [Herbaspirillum seropedicae SmR1]
 gi|300073334|gb|ADJ62733.1| periplasmic component of the Tol biopolymer transport system
           protein [Herbaspirillum seropedicae SmR1]
          Length = 428

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 207/422 (49%), Gaps = 18/422 (4%)

Query: 27  FFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDS 86
           F P S  A ++        S + IA T F   +    +++ VV  DL RS VF LI    
Sbjct: 22  FAPAS-QAQIRFEITGVGASQIPIAITAFPGEESAPQQITSVVKADLARSGVFKLIDNG- 79

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS 146
               +++  ++  + DW   GA  L  G V +    R  V +RL+D     Q+      +
Sbjct: 80  --DALSDSSAV-NYADWQKRGANALAVGSVTRLADGRFDVRYRLFDTVQSSQLSALSIGA 136

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
            P   R  AH I+DDIYQ +TG  G F++RI +V++S   G  +  L V D DG   +  
Sbjct: 137 QPQLLRLTAHKIADDIYQKLTGIPGIFSTRISYVTKS--GGEYR--LEVADADGEGTQVA 192

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S + I+  P +SP+  KVAY +++ +  + VY+ +  + R    + NF+    AP +S
Sbjct: 193 LRSNEPII-SPSWSPDGTKVAYVSFEMKKPV-VYIQNL-VTRQRSIVANFKGSNSAPAWS 249

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G R  +++ +D    +Y ++   +   RLTN+  I+    +SPD   I F SDR G  
Sbjct: 250 PDGSRLAVALTRDGLTQVYVINADGSGLRRLTNSAGIDTEPQFSPDGGSIYFTSDRSGGP 309

Query: 327 QLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           Q+Y +  +G   +R++ +   SY   P  SP G  +AF      +F +  +     QE  
Sbjct: 310 QVYKVGLDGGSPQRVTFN--GSYNISPRISPDGKTLAFISRRDGQFQLYALDLTNGQEIR 367

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
           L + S  Q+P+++P+G+ ++++ +  G  GS L  + ++GR +  + T A    +P W  
Sbjct: 368 LSDGSRDQSPSFAPNGKYIMYATEA-GRRGS-LAVVSVDGRIKQRLTTQAGDIREPTWGP 425

Query: 445 FM 446
           FM
Sbjct: 426 FM 427


>gi|319786285|ref|YP_004145760.1| Tol-Pal system beta propeller repeat protein TolB
           [Pseudoxanthomonas suwonensis 11-1]
 gi|317464797|gb|ADV26529.1| Tol-Pal system beta propeller repeat protein TolB
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 462

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 223/449 (49%), Gaps = 24/449 (5%)

Query: 7   IAEELNMKINL----CLLLVLIGGFFPTSIHAF-VKVATNSANYSPVSIAFTKFVSIDEL 61
           + + L MK +L     L  +LI G          + +   +A+  P+++    +    E 
Sbjct: 18  MPKSLPMKASLRWFFLLACLLIPGLAAAQQQGLEIDIIGGNASALPIAVVPMPY----EG 73

Query: 62  GGK-----VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV 116
           GG      V++VV  DL RS  F  + +    ++ T    I  +  W  L    LV GRV
Sbjct: 74  GGGAPQTDVAKVVRDDLARSGQFRTLPEAQMVERPTRGGEI-NYPTWRQLRQDYLVVGRV 132

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
           +  G+   RVE+ L+DV   ++++G    +  ++ R +AH I+D IY+ I G +G F +R
Sbjct: 133 LDAGEGGYRVEYELFDVGRGERLLGLAMTARASAMRDVAHQIADAIYEKILGVRGAFWTR 192

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I +V+ +     ++ +L V D DG N + +  S + +L  P +SP+ +K+AY +++  + 
Sbjct: 193 IAYVTANGSGSGMRYALVVADSDGWNPQVVVRSAEPLL-SPAWSPDGRKLAYVSFERGNS 251

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             +Y+ D     A + + +FR +  AP FS +G+R  +S+ +    +IY +DL S    +
Sbjct: 252 -SIYIQDIATG-ARELVSSFRGINSAPSFSPDGRRLALSLSRSGNPEIYVMDLGSKQLTQ 309

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LTN   I+   ++S D S I F SDR G+ Q+Y + S+G    R++     +    V S 
Sbjct: 310 LTNHFGIDTEPTWSADGSTIYFTSDRGGRPQIYQVPSSGGAASRVTFQGNYNATATV-SH 368

Query: 357 QGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDT 414
            G  IA  + SG  + I +M    GS     +   +L ++P+++P+G  LI++ ++ G  
Sbjct: 369 DGKKIAMAQGSGNTYRIAMMDTSLGSPRWSTISTGSLDESPSFAPNGSMLIYAAREGGR- 427

Query: 415 GSKLYSIDLNGR-NETLINTPAYASDPQW 442
              LY++  + R  + L+       +P W
Sbjct: 428 -GVLYAVSADARVRQRLVLADGDVREPAW 455


>gi|254490151|ref|ZP_05103342.1| Tol-Pal system beta propeller repeat protein TolB [Methylophaga
           thiooxidans DMS010]
 gi|224464637|gb|EEF80895.1| Tol-Pal system beta propeller repeat protein TolB [Methylophaga
           thiooxydans DMS010]
          Length = 432

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 229/439 (52%), Gaps = 27/439 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK-VSEVVSKDLQR 75
           + LL+ L+    P   HA + +     + + + IA   F +      + +SE+VS DL  
Sbjct: 9   IALLIALL----PWPAHALLTIEITGGSEAALPIAIVPFGTEGFAPPEDLSEIVSNDLAS 64

Query: 76  SDVF------NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           S  F      +LISQ    +++        F DW  L ++ L+ G+V  +  +  +V+F+
Sbjct: 65  SGRFAPLEKRDLISQPHESEQVN-------FADWRLLRSEGLLIGKVSSQDGENYQVQFQ 117

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE-SVVSGI 188
           L+DV   +Q++GK++    +  R + H I+D +Y+++TGEKG F++R+ FVSE     G 
Sbjct: 118 LFDVYKAEQLVGKRYQVPASGLRNLGHQIADIVYETLTGEKGVFSTRLAFVSEMKNADGS 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            + +L V D DGAN R +  S   IL  P ++P+ +++ Y ++++     VY+      R
Sbjct: 178 KRYALQVSDADGANPRTVLQSTQPIL-SPNWAPDGEQLTYVSFENGKA-EVYVQQLSSGR 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISA 307
               + +F  +  AP +S +GK+  +++ K+   +IY ++L S    R+T N+  I+  A
Sbjct: 236 R-NSVASFEGLNTAPAWSPDGKKLALTLSKNGNPEIYVMELASGNLSRVTHNSQAIDTEA 294

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + P   +I+F SDR G+ Q+Y + ++G   +R++ +   +    + SP G +++     
Sbjct: 295 VWMPSGREILFTSDRGGRPQIYRVDASGGRAERVTFEGGYNASADI-SPDGRMMSMVHSV 353

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR- 426
             +F I V        ++L + +  ++P+++P+GR ++++ ++ G     L ++ ++GR 
Sbjct: 354 NGRFHIAVQDLQTGTVQVLTDTTGDESPSFAPNGRMILYATEQKGR--GILAAVSVDGRI 411

Query: 427 NETLINTPAYASDPQWVGF 445
            + L  + +   +P W  F
Sbjct: 412 KQRLGESGSAVREPAWSPF 430


>gi|145588463|ref|YP_001155060.1| translocation protein TolB [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046869|gb|ABP33496.1| TolB, N-terminal domain protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 436

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 218/438 (49%), Gaps = 26/438 (5%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
            ++  L+ GF  T   A + +       S   IA  +F   ++L   ++E++ +DL RS 
Sbjct: 17  AIVAALLCGF-ATPALAQMNIEITGVGQSLYPIAVMRFKDENKLPTNITEIIRQDLARSG 75

Query: 78  VFNLISQDSFKQKITNPD-SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
            F    +++     T  D   P ++ W + GA  LV G V++ G  +  + ++L+D++  
Sbjct: 76  YF----KNTENGNATESDEGTPNYKSWAARGADALVVGSVVQTGNGQFDIHYKLFDIRKS 131

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           + + G    SS  + R +AH I+DDI   + GE+G F++R+ +    V+    +  L + 
Sbjct: 132 QGLGGLNLNSSADNLRAVAHKIADDIIFKLLGERGVFSTRLSY----VIKDGKRYRLVIS 187

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDT--RIDRAPKRI 253
           D DG NIR    S + I+  P +SP+ +KVAY +++D + ++ V+ + T  RI  + ++ 
Sbjct: 188 DADGQNIRNAMNSSEPII-SPSWSPDGKKVAYVSFEDRKPVIYVHELATGRRISLSNQKG 246

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            N      AP +S +GK+  +S+ KD    IY ++   +   RLT    I+    YS D 
Sbjct: 247 NNS-----APAWSPDGKKLAVSLSKDGNTQIYGINADGSGLHRLTRGNTIDTEPQYSADG 301

Query: 314 SQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             I F SDR G  Q+Y M + G      KR++  K+     P  SP G  +A+    G  
Sbjct: 302 RYIYFTSDRGGNPQIYRMSAEGEQVEGAKRVTF-KQGFVTSPRISPDGKYLAYIANVGGA 360

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           + + ++       + L + ++ ++P+++ +GR +++S K  G     L ++ ++G ++ +
Sbjct: 361 YRLYILNLATGDSQALTDGTSDESPSFAANGRYVLYSTKVGGK--RVLAAVSVDGNSKQV 418

Query: 431 INTPAY-ASDPQWVGFMD 447
           ++ P      P W  FMD
Sbjct: 419 LSIPGSDVRQPSWGPFMD 436


>gi|134095584|ref|YP_001100659.1| TolB periplasmic protein [Herminiimonas arsenicoxydans]
 gi|133739487|emb|CAL62538.1| Protein TolB precursor [Herminiimonas arsenicoxydans]
          Length = 423

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 207/423 (48%), Gaps = 18/423 (4%)

Query: 27  FFPTSI-HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
            F TS+ HA ++V       + + IA   F        +VS ++  DL RS  F +I   
Sbjct: 15  LFVTSLAHAQLRVEIAGVGANQIPIAIAAFGDESIAPHQVSAIIKADLLRSGYFKVIDTG 74

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF 145
           +    +   +S     DW S GA  LV G V +    R  V++RL+D   + Q+      
Sbjct: 75  T----VLTENSQVNLADWKSRGADALVVGSVSRLPDGRFDVKYRLFDTIKQAQLSSLALA 130

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
           + P   R  AH I+DDIY+ +TG +G F +RI +V+++      +  L + D DG   + 
Sbjct: 131 NQPQFIRVSAHKIADDIYEKLTGIRGAFATRIAYVTKAGK----EFRLEIADSDGEGTQV 186

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
              S + I+  P +SP+  KVAY +++++  + VY+ D  + R      NF+    AP +
Sbjct: 187 ALRSNEPII-SPAWSPDGTKVAYVSFENKKPV-VYIQDL-VSRKRTVAANFKGSNSAPSW 243

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G R  +++ +D    +Y V+       RL+N+  I+    YS D   I F SDR G 
Sbjct: 244 SPDGSRLAVALSRDGLTQVYVVNADGTNPRRLSNSNGIDTEPQYSADGQSIYFTSDRSGG 303

Query: 326 EQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            Q+Y M SNG + +R++     SY   P  SP G  +A+      KF + ++  +  QE+
Sbjct: 304 PQIYKMGSNGGEARRVT--FAGSYNISPRISPDGKFLAYISRREGKFQLFILDLNNGQEQ 361

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWV 443
            L +    ++P++SP+G+ L+++  + G  G+ L  + ++G+  + L        +P W 
Sbjct: 362 RLSDTVKDESPSFSPNGKYLMYA-TESGRRGT-LAVVSVDGQVKQRLTTQSGDIREPTWG 419

Query: 444 GFM 446
            FM
Sbjct: 420 PFM 422


>gi|285019183|ref|YP_003376894.1| biopolymer ABC transporter periplasmic protein [Xanthomonas
           albilineans GPE PC73]
 gi|283474401|emb|CBA16902.1| probable biopolymer transport protein, periplasmic component
           [Xanthomonas albilineans]
          Length = 439

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 216/430 (50%), Gaps = 16/430 (3%)

Query: 22  VLIGGFFPTSIHA-----FVKVATNSANYSPVSIAFTKFV-SIDELGGKVSEVVSKDLQR 75
           VLI    P +  A      + +   +A+ +P+++    +  S       V+ VV  DL R
Sbjct: 10  VLIALLLPLTASAQDKGLEIDIVGGNASATPIAVVPMPYQGSAAAPSTDVAAVVRADLDR 69

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  F  + +    ++ T    + ++  W +L    LV GRV+  G+   RVE+ L+DV  
Sbjct: 70  SGQFRDLPEAQMVERPTRGSDV-QYATWRALKQDYLVVGRVLDAGEGAYRVEYELFDVAK 128

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            ++I+G    +   + R +AH ++D IY+ ITG +G F +RI +V+ S   G ++ +L V
Sbjct: 129 GERILGLAMTARANAMRDVAHQMADAIYEKITGVRGAFWTRIAYVTASGKDGAMRYALMV 188

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N + +  S + +L  P +SP+ +K+AY +++  +   +Y+ D     A + + +
Sbjct: 189 ADSDGYNPQTIVRSAEPLL-SPSWSPDGKKLAYVSFEHGNS-SIYIQDIATG-ARQLVSS 245

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           FR +  AP FS +G++  +++ +    +IY +DL S    +LTN   I+   +++PD + 
Sbjct: 246 FRGINGAPSFSPDGRKLALTLSRSGNPEIYVMDLGSKQLTQLTNNFGIDTEPTWAPDGNS 305

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           I F SDR G+ Q+Y + + G    RI+     +    V S  G  IA  + SG  + I +
Sbjct: 306 IYFTSDRGGRPQIYQVPATGGSATRITFQGNYNATASV-SYDGKKIAVAQGSGNSYKIAM 364

Query: 376 MKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLIN 432
           M +     R   L   S  ++P+++P+   ++++ ++ G     LY++  + R  + L+ 
Sbjct: 365 MDRSLGAPRWSTLSTGSLDESPSFAPNASMVLYAAREGGR--GVLYAVSADARVRQRLVL 422

Query: 433 TPAYASDPQW 442
                 +P W
Sbjct: 423 ADGDVREPSW 432


>gi|253702172|ref|YP_003023361.1| Tol-Pal system beta propeller repeat protein TolB [Geobacter sp.
           M21]
 gi|251777022|gb|ACT19603.1| Tol-Pal system beta propeller repeat protein TolB [Geobacter sp.
           M21]
          Length = 407

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/400 (29%), Positives = 204/400 (51%), Gaps = 27/400 (6%)

Query: 46  SPVSIAFTKF-VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWN 104
           +PVS     F      L G+V+  VS++L  S++F +         +  P  +      +
Sbjct: 28  APVSRKLKLFPAPTTALAGQVTPEVSREL--SELFGM------DLGLAGPFEV----SGD 75

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
             GA +++      +G + + +E RL D    ++I  K++  S    R++ H  SD++ +
Sbjct: 76  GAGADLILKSSYSAQGGN-ITLECRLVDRVLNREITAKRYSGSSKELRRMGHAFSDEVLR 134

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           ++TGEKG F  +I +V++  +SG     + VMD DG N + LT +   I  +P F+P+ +
Sbjct: 135 AVTGEKGPFTGKIAYVTK--ISG--NKEIFVMDYDGRNPQRLT-NNGSINLKPDFAPSGK 189

Query: 225 KVAYATY--DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           ++ Y +Y   + D+ R  L  T ++    RI +   +     +S +G +  + + KD   
Sbjct: 190 EIIYTSYKKGNPDLYRRELF-TGLE---ARISSRNGLNAMGAYSPDGGKIAMVMSKDGNS 245

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +IY +  +     RLTN   I++S ++SPD S+I F SDR GK Q++VM ++G + +R++
Sbjct: 246 EIYLISREGKELARLTNNHAIDVSPAWSPDGSRIAFVSDRLGKPQVFVMNADGGNLRRLT 305

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            +  A    P WSP+GD IA+ +  G  F I  +  DG+Q+  L    + + P +SP GR
Sbjct: 306 TNG-AYNVTPRWSPKGDRIAYARQGGGGFQIHAINPDGTQDTQLTSAGSNEHPRFSPDGR 364

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            ++FS  +DG     L   D +G+     N  A  S P W
Sbjct: 365 FIVFSSTRDGAEAIYLMRADGSGQTRVSPNK-AQNSHPTW 403


>gi|152980804|ref|YP_001354157.1| periplasmic component of the Tol biopolymer transport system
           [Janthinobacterium sp. Marseille]
 gi|151280881|gb|ABR89291.1| periplasmic component of the Tol biopolymer transport system
           [Janthinobacterium sp. Marseille]
          Length = 423

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 212/438 (48%), Gaps = 21/438 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHA--FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +K        ++  F  T  HA   V++A   AN  PV+IA   F        +VS ++ 
Sbjct: 2   IKTTFLRSFAVMALFITTLAHAQLRVEIAGVGANQIPVAIA--AFGDETLAPQQVSAIIK 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F +I        +   +S     DW S GA  +V G V+K    R  V +RL
Sbjct: 60  ADLLRSGFFKIIDTGG----VLTENSQLNLADWKSRGADAIVVGSVLKLADGRYEVRYRL 115

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +D     Q+      S P   R  AH ++DD+Y+ +TG KG F +RI +V++S      +
Sbjct: 116 FDTVKGTQLSSLALASQPQFLRVSAHKVADDVYEKLTGIKGAFATRIAYVTKSPK----E 171

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L + D DG   +    S + I+  P +SP+  KVAY +++++  + VY+ D  + R  
Sbjct: 172 FRLEIADSDGEGTQVALRSNEPII-SPSWSPDGTKVAYVSFENKKPV-VYIQDL-VSRKR 228

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
               NF+    AP ++ +G R  +++ +D    +Y V+       RL+++  I+    +S
Sbjct: 229 TVAANFKGSNSAPSWAPDGNRLAVALSRDGLTQVYVVNADGTGLRRLSSSNGIDTEPQFS 288

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGE 369
            D   I F SDR G  Q+Y M +NG + +R++     SY   P  SP G  +A+      
Sbjct: 289 ADGQSIFFTSDRSGGPQIYKMGANGGEARRVT--FSGSYNISPRISPDGKYLAYISRREG 346

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           KF + ++     QE+ L +    ++P++SP+G+ L+++  + G  G+ L  + ++G+ + 
Sbjct: 347 KFQLFLLDLTNGQEQRLSDTVKDESPSFSPNGKYLMYA-TESGRRGT-LAVVSVDGQVKQ 404

Query: 430 LINTPAY-ASDPQWVGFM 446
            + T A    +P W  FM
Sbjct: 405 RLTTQAGDIREPTWGPFM 422


>gi|34495564|ref|NP_899779.1| translocation protein TolB [Chromobacterium violaceum ATCC 12472]
 gi|67461997|sp|Q7P1V3|TOLB_CHRVO RecName: Full=Protein tolB; Flags: Precursor
 gi|34101419|gb|AAQ57788.1| TolB protein precursor [Chromobacterium violaceum ATCC 12472]
          Length = 428

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 191/385 (49%), Gaps = 14/385 (3%)

Query: 63  GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
           G ++ V+  DL  S  F LI   +       P  I R+  W + GAQ L  G+V   G  
Sbjct: 53  GNLTPVIRNDLALSGAFRLIDPSAVANVPFEPADI-RYPLWQAAGAQSLAIGKVESAGGG 111

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           ++++ FRL D   RKQ+ G +F  +P   R++AH I+D IY++ITG+KG FN+R+ +V +
Sbjct: 112 QIKISFRLMDASQRKQLTGGEFTVTPDRSRQVAHAIADMIYEAITGQKGFFNTRLAYVLK 171

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S  S     +L + D DG   + +  S + I+  P +SP+ + +AY ++  +  + V++ 
Sbjct: 172 SGRS----YALQISDVDGQRSQTILRSTEPII-SPSWSPDGRHIAYVSFASQKPV-VWVQ 225

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    +  + + NF+    AP +S +G +  + +       IY ++       RL     
Sbjct: 226 DLATGQR-RAVANFKGSNSAPAWSPDGSKLAVVLTTSGNSQIYIINAAGGPARRLMYNGG 284

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLI 361
           I+   ++SPD S + F SDR G  Q+Y +  NG + +R++   E +Y   P  SP G  +
Sbjct: 285 IDTEPAFSPDGSMVYFVSDRSGNPQIYRVPVNGGNAQRVTW--EGAYNVSPKLSPDGKTL 342

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + + S   F +       +  R L + S  + P+++P+GR +++S    G   S LY+ 
Sbjct: 343 VYIRRSAGNFRVMSQDLATNDSRQLSDGSYSERPSFAPNGRMVLYSSDAGGQ--SVLYAA 400

Query: 422 DLNGRNET-LINTPAYASDPQWVGF 445
             +G ++  L        DP W  F
Sbjct: 401 TADGSSKVKLAVLNGDVQDPAWGPF 425


>gi|311103961|ref|YP_003976814.1| Tol-Pal system beta propeller repeat protein TolB [Achromobacter
           xylosoxidans A8]
 gi|310758650|gb|ADP14099.1| Tol-Pal system beta propeller repeat protein TolB [Achromobacter
           xylosoxidans A8]
          Length = 417

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 210/431 (48%), Gaps = 21/431 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDV 78
           L L  +    P      V ++   A   PV+IA   F   D  G  ++EV+  DL R+  
Sbjct: 2   LTLACLMAIKPAHAQLRVDISGTGATQYPVAIA--DFAVDDTHGRALAEVIRADLTRTGQ 59

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F LI+       + +P +     DW   GA  +  G + + G  R  V +RL D   + Q
Sbjct: 60  FRLINAAGSGLNVDSPIA---HDDWRGKGADFIAYGSITRGGDGRYDVRYRLADTVKKSQ 116

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           + G  F  +    R++AH I+D IY+ ITG KG F++RI +V +   +      L V D 
Sbjct: 117 LDGVAFSGTEQELRRVAHQIADRIYEKITGVKGVFSTRIAYVLKKGAT----YELQVADA 172

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFR 257
           DG N +    SR+ I+  P +SP+  K+AY +++  + ++ V+ + T   R+P  + NF+
Sbjct: 173 DGQNPQVALRSREPII-SPSWSPDGSKLAYVSFESGKPVVYVHNLATSA-RSP--VANFK 228

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSPDSSQ 315
               AP +S +G +  +++ +D    IY V     SN T R+T +  I+   S++PD + 
Sbjct: 229 GNNSAPGWSPDGSKLAVALTRDGLSQIYIVGATDGSNPT-RVTRSPGIDTEPSFTPDGAS 287

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           I+F SDR G  Q+Y   S+G + +R++ +   +   P  SP G  + +       F I  
Sbjct: 288 IIFTSDRSGGPQIYQTGSSGGEARRLTFNGGYN-ISPRISPDGSTLLYVARRDGAFRIAS 346

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTP 434
           +      E LL +  + Q+P+++P+G  ++++  ++G   S L  +  +GR  +TL    
Sbjct: 347 LNLSSGSETLLTDGRDDQSPSFAPNGMQVLYAAIQNGR--SVLAGVSSDGRVRQTLSVLN 404

Query: 435 AYASDPQWVGF 445
               +P W  F
Sbjct: 405 GEIREPTWGPF 415


>gi|116748201|ref|YP_844888.1| TolB domain-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116697265|gb|ABK16453.1| TolB, N-terminal domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 457

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/396 (29%), Positives = 199/396 (50%), Gaps = 30/396 (7%)

Query: 44  NYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP- 98
           N+  ++IA   F        +L  ++ E ++ DL  S +F  +    F   + +P ++  
Sbjct: 53  NFQRIAIAIPDFKRQSSEQTQLAREMGETLAGDLDFSGIFRPLDPKGF---LEDPQTMGL 109

Query: 99  -----RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
                +F DW  LGA  +V G  + +G   +++E RL+DV   + +I K +      WR 
Sbjct: 110 NAPEIKFPDWRRLGADYMVRGNYLVQGGT-VKIEARLFDVAAGRPVIAKAYEGDVRGWRA 168

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRDQ 212
           + H  +D+I  ++TGE+G F+++I +V       + KN  + + D DG+N   +  SRD 
Sbjct: 169 MIHRFADEILYALTGERGVFDTKIAYVQS-----MGKNKEIFISDFDGSNP--VQASRDN 221

Query: 213 IL-FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            L   P ++P   ++AY +Y D +  ++YL++ + D + + +  +  M ++P +      
Sbjct: 222 SLSLSPAWNPQMSQIAYVSYRDGNA-KIYLLNLQ-DGSSRLLCGYPGMNISPAWRPGRPE 279

Query: 272 ALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             +++ +D   DI+ V   S    ++L     IN+S  +SPD   + F SD  G  Q+Y 
Sbjct: 280 LAVTLTRDGNPDIFLVSASSGQILQKLVQGRSINVSPDWSPDGRSLAFVSDESGNPQIYA 339

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-D 389
           +   GS QKR           P WSP+GD IA++   G +  I +MK DGS  R L + D
Sbjct: 340 IDV-GSGQKRRLTFSGTYNTSPSWSPKGDFIAYSGTVGGRHHIFIMKTDGSGNRQLTDGD 398

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +  +PTWSP GR + FS  + G  GS ++   +NG
Sbjct: 399 GDDVSPTWSPDGRMIAFSSTRQG--GSAIWVSSVNG 432


>gi|124266539|ref|YP_001020543.1| translocation protein TolB [Methylibium petroleiphilum PM1]
 gi|124259314|gb|ABM94308.1| TolB protein precursor, periplasmic component of the Tol biopolymer
           transport system [Methylibium petroleiphilum PM1]
          Length = 421

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 202/408 (49%), Gaps = 16/408 (3%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
           +V  +    + + IA  KF   ++    V  +V  DL+RS VF  +        + +  S
Sbjct: 23  RVEISGVGATQLPIAVVKFRDEEKAPQPVGAIVRADLERSGVFRNLDTSGV---VLDEGS 79

Query: 97  IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            P   DW    A  LV G V +    R  V +RLWDV   + + G+ +       R  AH
Sbjct: 80  QPAMSDWRGRSADALVGGSVTRLADGRFDVRYRLWDVVKGRDLGGQSYAVPAGDLRLAAH 139

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            I+D IY+ +TGEKG F++RI +V++    G  + +L V D DG   +    S + I+  
Sbjct: 140 RIADAIYEKLTGEKGVFSTRIAYVTK----GGGRFTLWVTDADGEGGQSALASPEPII-S 194

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +SP+ +++AY +++    + VY+ +    +  + + +FR    AP +S +G++  +++
Sbjct: 195 PAWSPDGRELAYVSFESRKAV-VYVQEVASGKR-RTLASFRGSNSAPAWSPDGRQLALTL 252

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D    ++ +       +RLT++  I+  A+++PD   I F SDR G  Q+Y + + G 
Sbjct: 253 SRDGGSQLFVMGRDGEGVKRLTSSGAIDTEATWAPDGKSIYFVSDRGGSPQIYRVPAGGG 312

Query: 337 DQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           + +R+S     SY   P  SP G  +A+    G  F + VM       R + +  + ++P
Sbjct: 313 NAERVS--FSGSYNISPAISPDGRTMAYISRDGGAFRVQVMDLASGTARAVSDTKDDESP 370

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           +++P+GR +I++ +  G     L +   +G+    L++T A   +P W
Sbjct: 371 SFAPNGRLIIYATRDGGR--DVLMTTTTDGKIKARLVSTQADVREPVW 416



 Score = 43.9 bits (102), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 5/168 (2%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           + L VM RDG  ++ LT S   I  E  ++P+ + + Y   D     ++Y +      A 
Sbjct: 258 SQLFVMGRDGEGVKRLT-SSGAIDTEATWAPDGKSI-YFVSDRGGSPQIYRVPAGGGNA- 314

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +R+    S  ++P  S +G+      +   A  +  +DL S  T R  +    + S S++
Sbjct: 315 ERVSFSGSYNISPAISPDGRTMAYISRDGGAFRVQVMDLASG-TARAVSDTKDDESPSFA 373

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           P+   I++ +   G++ L    ++G  + R+    +A   +PVW P G
Sbjct: 374 PNGRLIIYATRDGGRDVLMTTTTDGKIKARLVS-TQADVREPVWGPYG 420


>gi|89900876|ref|YP_523347.1| translocation protein TolB [Rhodoferax ferrireducens T118]
 gi|119371056|sp|Q21WN7|TOLB_RHOFD RecName: Full=Protein tolB; Flags: Precursor
 gi|89345613|gb|ABD69816.1| TolB-like [Rhodoferax ferrireducens T118]
          Length = 425

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 199/415 (47%), Gaps = 17/415 (4%)

Query: 9   EELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           + +  +I LCLL+    G     + A  +V  +    + + IA + F   D +  K++ +
Sbjct: 2   QMMKKRILLCLLV----GMTCLPVLAQFRVEVSGVGLTQLPIAVSAFRGQDSVPQKIAAI 57

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V  DL+RS  F  +  D+    + +  + P    W   GA  LVTG V +    R  V F
Sbjct: 58  VQADLERSGQFRGV--DTVGAAL-DEGTRPDVALWRQKGADSLVTGSVSRLADGRYDVRF 114

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWDV   + + G+ +  + A  R  AH I+D IY+ +TG+KG F++RI +V+++     
Sbjct: 115 RLWDVVRGQDLGGQSYAVTQADLRLSAHRIADFIYEKLTGDKGAFSTRITYVTKAAQ--- 171

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  L V D DG N +    S + I+  P +SPN  ++AY +++    + VY  D    +
Sbjct: 172 -RYQLWVADADGENAQSALASPEPII-SPAWSPNGSQIAYVSFESRKPV-VYTHDVATGK 228

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             + I NFR    AP +S +G+   +++ +D    +Y++D       RL     I+    
Sbjct: 229 R-RLIANFRGSNSAPAWSPDGRTLAVTLSRDGGSQLYAIDAGGGEPRRLAQNSSIDTEPV 287

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFS 367
           Y+PD   I F SDR G  Q+Y M   G   +R++     +Y   P  SP G  +A+    
Sbjct: 288 YAPDGKNIYFVSDRGGAPQIYRMPVTGGGAERVT--FTGTYNISPAISPDGRWLAYISRV 345

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              F + V++        + + +  ++P+++P+ R ++++ +  G       ++D
Sbjct: 346 SGAFKLHVLELASGAVTAITDTTADESPSFAPNSRLIVYATQSQGREALMTATVD 400



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 14/176 (7%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++  +   DL+ +A  R+ + ++  ++      S++I + +    + QL+V  ++G + +
Sbjct: 128 QSYAVTQADLRLSA-HRIADFIYEKLTGDKGAFSTRITYVTKAAQRYQLWVADADGENAQ 186

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                 E     P WSP G  IA+  F   K  +        + RL+     SN  AP W
Sbjct: 187 SALASPE-PIISPAWSPNGSQIAYVSFESRKPVVYTHDVATGKRRLIANFRGSN-SAPAW 244

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNG-------RNETLINTPAYASDPQWVGFM 446
           SP GR+L  +  +DG  GS+LY+ID  G       +N ++   P YA D + + F+
Sbjct: 245 SPDGRTLAVTLSRDG--GSQLYAIDAGGGEPRRLAQNSSIDTEPVYAPDGKNIYFV 298



 Score = 43.5 bits (101), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 82/183 (44%), Gaps = 8/183 (4%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + R L V+ S   G   + L  +D  G   R L      I  EP ++P+ + + Y   D 
Sbjct: 247 DGRTLAVTLSRDGG---SQLYAIDAGGGEPRRLA-QNSSIDTEPVYAPDGKNI-YFVSDR 301

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               ++Y M      A +R+    +  ++P  S +G+      +   A  ++ ++L S A
Sbjct: 302 GGAPQIYRMPVTGGGA-ERVTFTGTYNISPAISPDGRWLAYISRVSGAFKLHVLELASGA 360

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              +T+T   + S S++P+S  IV+ +  +G+E L     +G  + R++  +     +P 
Sbjct: 361 VTAITDTT-ADESPSFAPNSRLIVYATQSQGREALMTATVDGKVKARLA-GQNGDIREPG 418

Query: 354 WSP 356
           W P
Sbjct: 419 WGP 421


>gi|241764619|ref|ZP_04762634.1| Tol-Pal system beta propeller repeat protein TolB [Acidovorax
           delafieldii 2AN]
 gi|241365940|gb|EER60570.1| Tol-Pal system beta propeller repeat protein TolB [Acidovorax
           delafieldii 2AN]
          Length = 439

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 205/422 (48%), Gaps = 18/422 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +A  +   +   LL  LI      ++  F +V       + + IA   F    +   K++
Sbjct: 11  LAAAVPQPLRRHLLAALISTPALPALAQF-RVEVTGVGLTQLPIAIAPFRGEAQSPQKIA 69

Query: 67  EVVSKDLQRSDVFNLI-SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
            +V  DL+RS  F  + +  S   + + PD       W   GA  L TG V +    R  
Sbjct: 70  GIVQADLERSGQFRAVDAAGSTLDETSRPD----VALWRQKGADSLATGSVTRLADGRFD 125

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           V FRLWDV   + + G+ F  +    R +AH I+D IY+ +TGE+G F++RI++V++S  
Sbjct: 126 VRFRLWDVVRGQDLGGQSFVVTQGDLRLVAHRIADYIYEKLTGERGVFSTRIVYVTKSGT 185

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
               + SL V D DG N +    S + I+  P +SPN  ++AY +++    + VY+ D  
Sbjct: 186 ----RYSLWVADADGENAQSALSSPEPII-SPAWSPNGGQIAYVSFESRKPV-VYVHDVA 239

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R  + I NFR    AP ++ +G+   +++ +D A  +Y++D       RL  +  I+ 
Sbjct: 240 SGRR-RLIANFRGSNSAPAWAPDGRTLAVTLSRDGASQLYTIDANGGEPRRLMQSAGIDT 298

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFT 364
              +S D   I F SDR G  Q+Y + ++G + +R++     +Y   P  SP G  +A+ 
Sbjct: 299 EPVFSGDGRSIYFVSDRGGAPQIYKVPASGGNAERVT--FSGTYNISPSISPDGRWLAYI 356

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              G  F + VM         + + S+ + P+++P+ R ++++ ++ G     L +  L+
Sbjct: 357 SRIGGAFKLHVMDLSSGAVSAITDTSSDENPSFAPNSRLIVYATQQQGR--EALMTTTLD 414

Query: 425 GR 426
           G+
Sbjct: 415 GK 416


>gi|322418108|ref|YP_004197331.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Geobacter sp. M18]
 gi|320124495|gb|ADW12055.1| Tol-Pal system beta propeller repeat protein TolB [Geobacter sp.
           M18]
          Length = 406

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 178/339 (52%), Gaps = 17/339 (5%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           G+ +L+      EG D + +E RL D    +++  K++       R++AH  SD++ +++
Sbjct: 78  GSALLLKSAYGTEG-DTVIIECRLVDQVRNREVTAKRYSGRAKDLRRMAHAFSDEVLRAL 136

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           TGEKG F  +I +VS+  +SG     + +MD DG N + LT +   I   P F+P+ +++
Sbjct: 137 TGEKGPFTGKIAYVSK--ISG--NKEIFLMDYDGRNPQRLT-NNGSINLYPDFAPSGKEL 191

Query: 227 AYATY--DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            Y +Y   + D+ R  L      R   R G   +M +   FS +G R  + + KD   ++
Sbjct: 192 IYTSYKKGNPDLYRRELFTGLEARISSRSG-LNAMGV---FSPDGSRVALVLSKDGNSEV 247

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           Y +        RLT    I+IS S+SPD S++ F SDR GK QL+VM +NG + +R++  
Sbjct: 248 YQIARDGKEVARLTKNHAIDISPSWSPDGSRVAFVSDRLGKPQLFVMDANGGNVRRLTTS 307

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             A    P WSP+GD I + +  G  F I  +  DGSQ+  L    + + P +SP GR +
Sbjct: 308 G-AYNVTPRWSPKGDRIVYARKEG-GFQIYAINPDGSQDTQLTSAGSNEHPRYSPDGRFI 365

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQW 442
           +FS  +DG  G  LY +  +G  +T I+   A  + P W
Sbjct: 366 VFSSTRDG--GEGLYLMRADGTGQTRISPNKAQNTHPTW 402


>gi|91787860|ref|YP_548812.1| translocation protein TolB [Polaromonas sp. JS666]
 gi|118574592|sp|Q12C28|TOLB_POLSJ RecName: Full=Protein tolB; Flags: Precursor
 gi|91697085|gb|ABE43914.1| TolB-like protein [Polaromonas sp. JS666]
          Length = 426

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 199/410 (48%), Gaps = 17/410 (4%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
            ++ +L  G  P    A  +V  +    + + IA   F    +   K+  +V  DL+RS 
Sbjct: 11  TVMSLLAAGLSPA--FAQFRVEVSGVGLTQLPIAIASFRGEVQAPQKIGNIVRADLERSG 68

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  +        + + ++ P    W   GA  +VTG V      R  V  RLWD+   +
Sbjct: 69  MFRPVDTAGI---VADENTRPDLAIWRQKGADAMVTGSVSPLADGRFDVRLRLWDIVRGQ 125

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
            + G+ +  + A  R  AH ISD +Y+ +TGEKG F++RI +V+++      + +L V D
Sbjct: 126 DLGGQSYTVAQADLRLSAHRISDFVYEKLTGEKGIFSTRIAYVTKTAQ----RFNLWVAD 181

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG   +    S + I+  P +SPN  ++AY +++    + +Y  D    +  + + NFR
Sbjct: 182 SDGEGAQSALTSPEPII-SPSWSPNGSQLAYVSFESRKPV-IYAHDVATGKR-RLLANFR 238

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               AP +S +GK+ + ++ +D    IY++ L     +RLT +  I+   +YSPD   I 
Sbjct: 239 GSNSAPAWSPDGKQLVATLSRDGGSQIYALGLSGGDPKRLTQSSSIDTEPAYSPDGRYIY 298

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           F SDR G  Q+Y M   G + +R++      Y   P  SP G  +A+    G  F + VM
Sbjct: 299 FVSDRGGAPQIYRMSPGGGNPERVT--FTGGYNISPAISPDGRWLAYVSRVGGAFKLHVM 356

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +        + + +  ++P+++P+ R ++++ ++ G     L +  L+G+
Sbjct: 357 ELASGTATPITDTTADESPSFAPNSRLIVYATQQQGR--EALMTTTLDGK 404


>gi|53804448|ref|YP_113693.1| translocation protein TolB [Methylococcus capsulatus str. Bath]
 gi|67461931|sp|Q609K4|TOLB_METCA RecName: Full=Protein tolB; Flags: Precursor
 gi|53758209|gb|AAU92500.1| tolB protein [Methylococcus capsulatus str. Bath]
          Length = 424

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 213/425 (50%), Gaps = 17/425 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDV 78
           LLL+  G      + A ++V  +      + +A   F +   L   +S++VS DLQRS  
Sbjct: 14  LLLIAAG-----QVCAELQVQISQGVEGAIPVAVVPFANQGSLSDSLSQIVSADLQRSGR 68

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F  +++ + +++ T PD + +   W +LG   +V G++   G D    +F + DV     
Sbjct: 69  FRTLAESAMQERPTAPDQVQQAA-WQALGQDFVVVGQIRPSG-DGYEADFHVVDVIRGTL 126

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++  +     A  R+ AH I+D IY++ITGE G F +R+ +VS S      + +L V D 
Sbjct: 127 VVSYRLPFGRAETRQAAHRIADVIYKAITGEPGAFATRVAYVSVSGEGANRRYNLQVADT 186

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG N + +  S + I+  P +SP+  K+AY ++  E       + T      +++ +   
Sbjct: 187 DGYNPQSVIVSNEPIM-SPAWSPDGTKIAYVSF--ESRRSAIYVQTLATGERRKVSDAPG 243

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +  AP FS +G R  +++ KD   DIY ++L S    R+T+   I+   ++S D   IVF
Sbjct: 244 INGAPAFSPDGSRLALTLSKDGNPDIYVMNLGSGGLTRITDYSGIDTEPNWSRDGRSIVF 303

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SDR GK QLY++ ++G   +R++ + + +    V+SP G  +A     G  + I VM  
Sbjct: 304 TSDRGGKPQLYLVSASGGPAERLTYEGDYNARG-VFSPDGRSLAMVHGKGGDYRIAVMDL 362

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYA 437
                R+L      ++P ++P+G  ++++ ++      +L ++ ++G+  ++L       
Sbjct: 363 ASRAVRVLTSGPLDESPGFAPNGSMILYAARR-----GQLAAVSIDGKVRQSLRIEGGAV 417

Query: 438 SDPQW 442
            +P W
Sbjct: 418 REPAW 422


>gi|149927732|ref|ZP_01915984.1| translocation protein TolB precursor [Limnobacter sp. MED105]
 gi|149823558|gb|EDM82788.1| translocation protein TolB precursor [Limnobacter sp. MED105]
          Length = 445

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 197/386 (51%), Gaps = 17/386 (4%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           + +V+  DL RS  F  I+  S  +   N  ++     W S+G   L+ G V K    RL
Sbjct: 73  IKKVIEDDLVRSGFFRSINTTSNVE--LNESTLIDPSAWKSIGVDALIVGSVKKLPDGRL 130

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            + F L D   +K +    +  +P++ R  AH I+D +Y+ + GEKG F++R+ +V ++ 
Sbjct: 131 DLRFNLHDTAQQKSLGKFSYVIAPSALRLHAHKIADFVYEKMLGEKGVFSTRLAYVEKAP 190

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMD 243
                +  L + D DGAN +    S++ I+  P +SP+  ++AY +++  + ++ V+ + 
Sbjct: 191 G----RYRLIIADADGANPQVALASKEPII-SPAWSPDGTQLAYVSFETRKPVVFVHTLA 245

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T   +A   + NF+    AP +SSNG++  + + KD    I+S++   ++  RLT+T  I
Sbjct: 246 TGRRKA---LANFKGSNSAPAWSSNGQQLAVVLTKDGGSQIFSMNADGSSLNRLTSTGGI 302

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIA 362
           N   +YS D   I F SDR G  Q+Y M +NG D  R++   E  Y   P  SP    + 
Sbjct: 303 NTEPAYSHDGRSIYFTSDRGGGPQIYRMSTNGGDATRVT--FEGGYNISPRISPDDKTLT 360

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +      +F I  +   G  E LL      ++P+++P+GR ++++ K  G     L  + 
Sbjct: 361 YVTRRDGQFRIAALDLAGGTEMLLTNTGRDESPSFAPNGRYILYATKSGGK--GTLAVVS 418

Query: 423 LNGR-NETLINTPAYASDPQWVGFMD 447
            +GR   TL ++ A  S+P W  F++
Sbjct: 419 KDGRIKYTLSSSGADISEPTWGPFIN 444


>gi|114776298|ref|ZP_01451343.1| translocation protein TolB precursor [Mariprofundus ferrooxydans
           PV-1]
 gi|114553128|gb|EAU55526.1| translocation protein TolB precursor [Mariprofundus ferrooxydans
           PV-1]
          Length = 421

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 196/406 (48%), Gaps = 20/406 (4%)

Query: 43  ANYSPVSIAFTKFVSIDELGGK--VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPR- 99
           ++Y P+ +A       D  G +  V +VVS DL  S  F  I   +F   + +PDS P  
Sbjct: 27  SDYRPLQVALLVEGEADAPGDRTMVRQVVSHDLASSQSFKPIDPMAF---LVSPDSAPAS 83

Query: 100 --FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHT 157
             + DW  +GA +L   + ++     L+ +  ++D    KQ++      S    R +AH 
Sbjct: 84  VDYGDWRLIGADILAICK-LRTVNGVLQADVHVYDPFRGKQLLSLVLEGSKPGLRVLAHR 142

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           ++D IYQ+  G  G F S +L+V++    G + + L  MD+DGAN R +      +L  P
Sbjct: 143 VADQIYQAALGIPGYFTSHVLYVTKH---GDLSD-LVYMDQDGAN-RQVVGKNFTLLLSP 197

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+  +VA  TY      R+   + R   + K  G F+ +   P FS +G+    ++ 
Sbjct: 198 DWSPDGNEVALNTYVGNHP-RLEFFNLRTG-SRKAFGEFKGLNSTPEFSPDGRYVAATLS 255

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               ++I+  D++       T+   I+ + ++SPD   I F S+R GK Q+Y    +G  
Sbjct: 256 DKNDINIHIYDVKKGTWRAFTHGHAIDTTPTWSPDGKWIAFVSNRSGKPQIYRKPLSGGR 315

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            + +S     +   P WSP GD IA        FA+  +K DG+  R L     +++P+W
Sbjct: 316 AQLVSTSGTYNT-SPAWSPTGDRIAMISLKNWSFAVATVKPDGTDIRYLATGKRVESPSW 374

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQW 442
           S +G+ L++S ++ G    +LY +   G     + +PA  ASDP W
Sbjct: 375 SSNGQMLLYSAEEHGI--RRLYRVPSWGGTPEAVTSPAIDASDPAW 418


>gi|95929959|ref|ZP_01312699.1| TolB-like [Desulfuromonas acetoxidans DSM 684]
 gi|95133928|gb|EAT15587.1| TolB-like [Desulfuromonas acetoxidans DSM 684]
          Length = 433

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 216/444 (48%), Gaps = 29/444 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVK-VATNSANYSPVSIAFTKFVSIDE----LGGKVSE 67
           MK  L + LVL+      +     K +   +     + ++ T+ +   +    L   V +
Sbjct: 1   MKKTLIMALVLLVSVLGAAGMTTAKEIVITTPGKQAIPMSLTRILPFQQRDTVLEETVDK 60

Query: 68  VVSKDLQRSDVFNLISQDSF-----KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
           V+S DL  S +F  +   +F     +  +T+ +    F  W  LGAQVL  G     G  
Sbjct: 61  VLSADLDLSGLFEFVDPQAFLDDAGRMGLTSTEV--NFTQWRLLGAQVLFKGGYRLNGS- 117

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           ++ +  RL+DV  R+ ++G  +    +  R++AH+ +D I +++TG+ G FN+RI F+S 
Sbjct: 118 QVELNLRLFDVISRRLLVGHNYRGQVSDVRRMAHSFADLILEALTGKSGAFNTRIAFISN 177

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--DDEDILRVY 240
              SG     L +M+ DG + + +T  R  +L  P FSP  ++V + +Y   + D+ R  
Sbjct: 178 Q--SG--HKELYLMESDGYDPKRITNHRSLVL-NPDFSPLGREVIFTSYRQGNPDLYRKE 232

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +   +      RI  ++ + ++ R+  +G+   +++ +D   +IY   L     +R+TN+
Sbjct: 233 IYTGK----EARISRYKGLNISGRYRHDGRELALTLSRDGNAEIYLESLSGQLHKRVTNS 288

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I++  S+SP   Q+VF S+R+G   L+V        +R++ + + +   P WSP G  
Sbjct: 289 WAIDVDPSWSPIGDQLVFVSNRQGNPNLFVADLIDGQVRRLTYNGKYNA-TPAWSPDGKR 347

Query: 361 IAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           I F++  G  F +  +  DG +ER L     N + P WSP GR +++S    G     +Y
Sbjct: 348 IVFSRLEGGAFNLFSIGVDGKEERQLTFGAGNKEHPRWSPDGRFIVYSNDISGK--KAIY 405

Query: 420 SIDLNGRNETLINT-PAYASDPQW 442
            +  +G  +  I+T  A  S P W
Sbjct: 406 VMRADGSGQRRISTLDADCSHPAW 429


>gi|163854963|ref|YP_001629261.1| translocation protein TolB [Bordetella petrii DSM 12804]
 gi|163258691|emb|CAP40990.1| TolB protein precursor [Bordetella petrii]
          Length = 439

 Score =  162 bits (410), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 205/418 (49%), Gaps = 21/418 (5%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
           HA ++V  +    +   +A   F   D  G  ++EV+  DL R+  F LIS       + 
Sbjct: 36  HAQLRVDISGTGATQYPVAIADFAVDDVHGRAIAEVIRADLTRTGQFRLISAAGSGLNVD 95

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
           +P +   + DW + GA  L  G + +    R  V +RL D   + Q+ G  F  S    R
Sbjct: 96  SPVA---YDDWRTKGADFLAYGSITRGADGRYDVRYRLADTVKKGQLDGVAFSGSEQELR 152

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           ++AH I+D IY+ ITG +G F++RI +V +   +      L V D DG N +    SR+ 
Sbjct: 153 RVAHQIADRIYEKITGVRGVFSTRIAYVLKRGNT----YELQVADADGQNPQVALRSREP 208

Query: 213 ILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           ++  P +SP+  K+AY +++  + ++ V+ + T   R P  + NF+    AP +S +G +
Sbjct: 209 VI-SPAWSPDGSKLAYVSFESGKPVVYVHTLATSA-RIP--VANFKGNNSAPAWSPDGSK 264

Query: 272 ALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
             +++ +D    IY V  D  SN   RLT +  I+    ++PD   I+F SDR G  Q+Y
Sbjct: 265 LAVALTRDGLSQIYIVGADGSSN-MRRLTRSPGIDTEPIFTPDGRSIIFTSDRSGGPQIY 323

Query: 330 VMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +G D +R++ +   SY   P  SP G  + +       F I  ++     E LL +
Sbjct: 324 QTSLDGGDARRLTFN--GSYNISPRISPDGSTLLYVARRDGAFRIASLQLATGNETLLTD 381

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
             + QAP+++P+G  ++++  ++G   S L  +  +GR  +TL        +P W  F
Sbjct: 382 GRDDQAPSFAPNGMQILYAAVQNGR--SVLAGVSSDGRVRQTLSVLNGEIREPTWGPF 437


>gi|71275796|ref|ZP_00652080.1| TolB, N-terminal [Xylella fastidiosa Dixon]
 gi|71900395|ref|ZP_00682528.1| TolB, N-terminal [Xylella fastidiosa Ann-1]
 gi|71163374|gb|EAO13092.1| TolB, N-terminal [Xylella fastidiosa Dixon]
 gi|71729827|gb|EAO31925.1| TolB, N-terminal [Xylella fastidiosa Ann-1]
          Length = 474

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 222/456 (48%), Gaps = 28/456 (6%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSI---HAFVKVATNSANYSPVSIAFTKFVSI 58
           S+ F    +L+M      L +L+G  FP S       + +     N +   IA       
Sbjct: 25  SIIFLKVIDLHMTKFPRWLAILVGLLFPLSALTQQQGLTIDIVGGNTAATPIAVLPMPYH 84

Query: 59  DELGGK---VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR 115
           D  G     VS VV+ DL RS  F  +      ++ T+   I RF  W +L    +V GR
Sbjct: 85  DSAGAPATDVSGVVAADLNRSGQFRTLPLGQITERPTHGSEI-RFPTWQALKQDYIVVGR 143

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V+   +   RVE+ L+DV++ K+++G    +  ++ R +AH ++D IY+ ITG +G F +
Sbjct: 144 VLDARQGTYRVEYELFDVRNGKRMLGLAMTARASAMRDVAHQMADAIYEKITGLRGAFFT 203

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI +V+ S   G ++ +L V D DG N + +  S + +L  P +SP+ +K+AY +++   
Sbjct: 204 RIAYVTASGSHGAMRYALMVADSDGYNPQTIVRSAEPLL-SPDWSPDGKKLAYVSFEKGG 262

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +Y+ D     + + + +FR +  AP F+ +G R  +S+ +    +IY +DL S    
Sbjct: 263 S-SIYIQDIATG-SRELVSSFRGINAAPSFAPDGHRIALSLSRSGNPEIYVMDLVSKQLI 320

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------QDKEASY 349
           +LTN+  I+    +S D   I F SDR G+ Q+Y + S G    R++           SY
Sbjct: 321 QLTNSFGIDTEPVWSSDGKFIYFTSDRGGRPQIYKVASVGGTATRVTFQGNYNATASVSY 380

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVM-KKDGSQERLLVEDSNL-QAPTWSPSGRSLIFS 407
            D         I   + SG  + I +M +  GS     +   +L ++P+++P+   ++++
Sbjct: 381 DD-------KKIVVAQGSGNVYRIAMMDQSSGSTVWNTLSTGSLDESPSFAPNASMVLYA 433

Query: 408 RKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
            ++ G     LY++  + R  + L++  +   +P W
Sbjct: 434 AREGGR--GVLYAVSADARVRQRLVSVDSDVREPAW 467


>gi|293603404|ref|ZP_06685831.1| TolB protein [Achromobacter piechaudii ATCC 43553]
 gi|292818177|gb|EFF77231.1| TolB protein [Achromobacter piechaudii ATCC 43553]
          Length = 416

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 209/435 (48%), Gaps = 26/435 (5%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           + LCL+        P      V ++   A   PV+IA   F   D  G  ++EV+  DL 
Sbjct: 2   LALCLMAAK-----PAHAQLRVDISGTGATQYPVAIA--DFAVDDTHGRALAEVIRADLT 54

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           R+  F LI+       + +P +     DW   GA  L  G + +    R  V +RL D  
Sbjct: 55  RTGQFRLINAAGSGLNVDSPIA---HDDWRGKGADFLAYGSITRGADGRYDVRYRLADTV 111

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            + Q+ G  F  +    R++AH I+D IY+ ITG +G F++RI +V +   +      L 
Sbjct: 112 KKGQLDGVAFSGTEQELRRVAHQIADRIYEKITGVRGVFSTRIAYVLKKGAT----YELQ 167

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRI 253
           V D DG N +    SR+ I+  P +SP+  K+AY +++  + ++ V+ + T   R P  +
Sbjct: 168 VADADGQNPQVALRSREPII-SPSWSPDGAKLAYVSFESGKPVVYVHTLATSA-RVP--V 223

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSP 311
            NF+    AP +S +G +  +++ +D    IY V     SN T R+T +  I+   +++P
Sbjct: 224 ANFKGNNSAPAWSPDGSKLAVALTRDGLSQIYIVGASDGSNPT-RVTRSPGIDTEPTFTP 282

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D + I+F SDR G  Q+Y   S G + +R++ +   +   P  SP G  + +       F
Sbjct: 283 DGASIIFTSDRSGGPQIYQTGSTGGEARRLTFNGGYN-ISPRISPDGSTLLYVARRDGAF 341

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETL 430
            I  +      E LL +  + Q+P+++P+G  ++++  ++G   S L  +  +GR  +TL
Sbjct: 342 RIASLNLSSGSESLLTDGRDDQSPSFAPNGMQVLYAAIQNGR--SVLAGVSSDGRVRQTL 399

Query: 431 INTPAYASDPQWVGF 445
                   +P W  F
Sbjct: 400 SVLNGEIREPTWGPF 414


>gi|120554619|ref|YP_958970.1| translocation protein TolB [Marinobacter aquaeolei VT8]
 gi|120324468|gb|ABM18783.1| TolB, N-terminal domain protein [Marinobacter aquaeolei VT8]
          Length = 442

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 217/435 (49%), Gaps = 14/435 (3%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL--GGKVSEV 68
           L   +  CL+L L          A + +       S + IA   F     +  G KV  +
Sbjct: 14  LKTPVIACLVLFLTASL---GARAELLIRITEGAGSAIPIAVVPFAESGSMPAGDKVGSI 70

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V  DL  S  F  + + S    + +  S   F+DW  LG + ++ G++ + G DR++  +
Sbjct: 71  VQADLTMSGEFRPL-EPSKMLSLPSERSEVYFRDWRMLGQRYVLVGQLTRNG-DRIQARY 128

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            L+DV   K+I+G+      ++ R + H ISD +Y++ITG  G F++++ +++ S     
Sbjct: 129 ELFDVNQEKRILGETAAVPASNLRSLGHHISDRVYEAITGAPGVFSTKLAYITVSGEGEQ 188

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD-DEDILRVYLMDTRID 247
            +  L V D DG   +    SR+ IL  P +SP+ +K+AY +++  + ++ V+ + T  +
Sbjct: 189 TRYRLQVSDVDGKRSKVRLESREPIL-SPAWSPDGKKLAYVSFETGKPVIFVHELATG-E 246

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R  +++ +F  +  AP +S++G+  L+++ +D   +IY +DL S    RLT+   I+  A
Sbjct: 247 R--QKVADFPGLNSAPAWSADGRSLLMTLSRDGNAEIYRMDLASRNLTRLTDHWAIDTEA 304

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++      I F SDR G  QLY M+  G++ +RI+     +   P  SP GD + +    
Sbjct: 305 AWDHADRGIYFTSDRSGGPQLYHMERPGAEPRRITFGSRYN-ARPRPSPTGDYVYYVHQR 363

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F I     +  +E ++    + ++P+ +P+GR LI++ +++G+    + S D  G  
Sbjct: 364 DSAFHIARTNLETGEETVITRTGSDESPSVAPNGRLLIYATRQNGEGVLTVVSAD-GGAA 422

Query: 428 ETLINTPAYASDPQW 442
            +L  +     +P W
Sbjct: 423 YSLPASEGEVREPAW 437


>gi|32699720|sp|Q9PC84|TOLB_XYLFA RecName: Full=Protein tolB; Flags: Precursor
          Length = 439

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 217/438 (49%), Gaps = 28/438 (6%)

Query: 20  LLVLIGGFFPTSI---HAFVKVATNSANYSPVSIAFTKFVSIDELGGK---VSEVVSKDL 73
           L +L+G  FP S       + +     N +   IA       D +G     VS VV+ DL
Sbjct: 8   LAMLVGLLFPLSALTQQQGLTIDIVGGNTAATPIAVLPMPYHDSVGAPATDVSSVVAADL 67

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  F  +      ++ T+   I RF  W +L    +V GRV+   +   RVE+ L+DV
Sbjct: 68  NRSGQFRTLPLGQIIERPTHGSEI-RFPTWQALKQDYIVVGRVLDARQGTYRVEYELFDV 126

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
           ++ K+++G    +  ++ R +AH ++D IY+ ITG +G F +RI +V+ S   G ++ +L
Sbjct: 127 RNGKRMLGLAMTARASAMRDVAHQMADAIYEKITGLRGAFFTRIAYVTASGSHGAMRYAL 186

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V D DG N + +  S + +L  P +SP+ +K+AY +++      +Y+ D     + + +
Sbjct: 187 MVADSDGYNPQTIVRSAEPLL-SPDWSPDGKKLAYVSFEKGG-SSIYIQDIATG-SRELV 243

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +FR +  AP F+ +G R  +S+ +    +IY +DL S    +LTN+  I+   ++S D 
Sbjct: 244 SSFRGINAAPSFAPDGHRIALSLSRSGNPEIYVMDLVSKQLIQLTNSFGIDTEPAWSSDG 303

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRIS------QDKEASYFDPVWSPQGDLIAFTKFS 367
             I F SDR G+ Q+Y + S G    R++           SY D         I   + S
Sbjct: 304 KFIYFTSDRGGRPQIYKVASVGGTATRVTFQGNYNATTSVSYDD-------KKIVVAQGS 356

Query: 368 GEKFAIGVM-KKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G  + I +M +  GS     +   +L ++P+++P+   ++++ ++ G     LY++  + 
Sbjct: 357 GNVYRIAMMDQSSGSTVWNTLSTGSLDESPSFAPNASMVLYAAREGGR--GVLYAVSADA 414

Query: 426 R-NETLINTPAYASDPQW 442
           R  + L++  +   +P W
Sbjct: 415 RVRQRLVSVDSDVREPAW 432


>gi|307545156|ref|YP_003897635.1| translocation protein TolB [Halomonas elongata DSM 2581]
 gi|307217180|emb|CBV42450.1| translocation protein TolB [Halomonas elongata DSM 2581]
          Length = 429

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 207/391 (52%), Gaps = 23/391 (5%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           ++++V+ DL+RS  F  + + +  +K ++ D + RF DW +L  + +V GRV +EG+  +
Sbjct: 54  LAQIVADDLERSGYFAPLERGAMFEKPSSSDEV-RFGDWKALDTRYMVVGRVSREGEG-V 111

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RV + L DV    +++G+   +S    R  AH ISD ++++ITG +G F++RI +V+   
Sbjct: 112 RVRYELMDVSGESRMLGETVTASSGQLRAAAHRISDQVFEAITGIRGAFSTRIAYVTSEG 171

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V   +   L V D DG N +    S D+ +  P +SP+ +K+AY +++ E    +Y+ + 
Sbjct: 172 VGDNMSFRLFVADADGHNSQQAL-SSDEPIMSPSWSPDGRKLAYVSFEGERPA-IYVQEV 229

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R  K + +F  +  AP +S +G++  +++ +D   +IY++D+ S   +R+TN+  I 
Sbjct: 230 SSGRRVK-LTSFEGLNSAPSWSPDGRKLAVALSRDGQPEIYTIDIGSRDLQRITNSPSIE 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              ++SPD   +++ SDR G  Q+Y     G + +R++     +     ++P G+ I   
Sbjct: 289 TEPAWSPDGRSLIYTSDRSGGPQIYRQALGGGEPERLTYTGNYNA-RARFAPDGEAIFLI 347

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSK--LY 419
                 + +     D  +   LVE S+ Q   +P+ +P+G  +IF+ ++    GS+  L 
Sbjct: 348 HKGNNGYQVARQDLDNGR---LVEISDAQQAESPSVAPNGTMVIFATQQ----GSRGVLG 400

Query: 420 SIDLNGRNETLINTPAYASD---PQWVGFMD 447
           ++  +GR       PA   D   P W  F++
Sbjct: 401 AVSADGRAS--FRLPAAQGDVREPAWSPFLN 429


>gi|224826140|ref|ZP_03699243.1| Tol-Pal system beta propeller repeat protein TolB [Lutiella
           nitroferrum 2002]
 gi|224601777|gb|EEG07957.1| Tol-Pal system beta propeller repeat protein TolB [Lutiella
           nitroferrum 2002]
          Length = 428

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 195/385 (50%), Gaps = 19/385 (4%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           ++ ++  DL  +  F ++   S       P  I  +  W   GAQ L  G+V   G  ++
Sbjct: 56  LTPIIRNDLLLTGAFRMVDPASAANPAFEPAQI-NYPAWRGAGAQSLAIGKVEAAG-GQV 113

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           ++ FRL+D   +KQ+   +F  +P   R++AHTI+D IY++ITG+KG FN+RI +V +S 
Sbjct: 114 KISFRLFDAAQQKQLTSGEFTVTPERSREVAHTIADMIYEAITGQKGIFNTRISYVLKSG 173

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
              +++    V D DG   + +  S++ I+  P +SP+  K+AY +++ +    V  +  
Sbjct: 174 RDYLLQ----VADMDGRGAQTILRSKEPII-SPAWSPDGGKIAYVSFEAKK--PVVWVQN 226

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +    + + NF+    AP +S +G++  + +       IY +D       R+T++  I+
Sbjct: 227 LVTGQRRIVANFKGSNSAPAWSPDGRQLAVVLTTSGTSQIYVIDANGGGARRVTHSNAID 286

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAF 363
              ++SPD SQ+ F SDR G  Q+YV    G   +R+S D   SY   P  SP G  +++
Sbjct: 287 TEPAWSPDGSQLYFVSDRAGGPQIYVQPVAGGSARRLSWD--GSYNVSPKVSPDGRTLSY 344

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +  G +F + V        R+L   +  + P+++P+ R ++F+  + G   S LY+   
Sbjct: 345 IRRQGGQFRVVVQDLASGDNRVLSSGAYNERPSFAPNSRMVLFASDEGGR--SVLYAATP 402

Query: 424 NGRNE---TLINTPAYASDPQWVGF 445
           +G ++    +IN      DP W  F
Sbjct: 403 DGSSKVRLAVIN--GDVQDPAWGPF 425


>gi|294341055|emb|CAZ89450.1| putative Protein tolB precursor [Thiomonas sp. 3As]
          Length = 438

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 198/416 (47%), Gaps = 19/416 (4%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF---NLISQDSF 87
           S  A  KV  +    + + +    F  ++     ++++V  DL RS +F   NL  Q   
Sbjct: 31  SAQAQFKVDVSGIGATQIPVGIGAFRDLNHCPQPIADIVRADLTRSGLFAVSNLGGQTLT 90

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
           +Q        P +  W S   + +  G V +    R +V+FRLWD   +  + G      
Sbjct: 91  EQ------GPPNYAAWRSQNLEAVAGGSVAQVTGGRWQVQFRLWDAVKQADLGGLALTVM 144

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           P   R  AH ISD IYQ +TG++G F +RI ++++   +G    SL + D DGAN ++  
Sbjct: 145 PGDLRLAAHKISDYIYQKLTGQRGVFATRITYITK---AGQHNFSLNIADSDGANPQFAL 201

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            SR+ +L  P +SPN Q++AY +++    + V++ D R   A + + NF+    AP FS 
Sbjct: 202 RSREPLL-SPVWSPNGQELAYVSFETGKPV-VFMQDVR-SGARRAVANFKGSNSAPAFSP 258

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G    + +       IY +  +     +L  +  I+   ++SPD   + F SDR+G  Q
Sbjct: 259 DGGTLAVVLTLTGRSQIYLMPSKGGTPRQLMRSYSIDTEPTFSPDGQSLYFVSDRDGGPQ 318

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y +  NG   +RI+     +   P  SP G  +A+    G  + +  +    +  +LL 
Sbjct: 319 VYKVGLNGGSVQRITYSGGYN-VSPAISPDGKTLAYISQQGNSYQLWSINLATNATQLLD 377

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           + S+   P+++P+G+ +++S    G  G  L ++ ++GR   TL        +P W
Sbjct: 378 DGSDCGHPSFAPNGQIVLYS--AGGRGGEVLKTVSIDGRVRSTLSQAGVQVREPSW 431


>gi|296136886|ref|YP_003644128.1| Tol-Pal system beta propeller repeat protein TolB [Thiomonas
           intermedia K12]
 gi|295797008|gb|ADG31798.1| Tol-Pal system beta propeller repeat protein TolB [Thiomonas
           intermedia K12]
          Length = 438

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 198/416 (47%), Gaps = 19/416 (4%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF---NLISQDSF 87
           S  A  KV  +    + + +    F  ++     ++++V  DL RS +F   NL  Q   
Sbjct: 31  SAQAQFKVDVSGIGATQIPVGIGAFRDLNHCPQPIADIVRADLTRSGLFAVSNLGGQTLT 90

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
           +Q        P +  W S   + +  G V +    R +V+FRLWD   +  + G      
Sbjct: 91  EQ------GPPNYAAWRSQNLEAVAGGSVAQVTGGRWQVQFRLWDAVKQADLGGLALTVM 144

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           P   R  AH ISD IYQ +TG++G F +RI ++++   +G    SL + D DGAN ++  
Sbjct: 145 PGDLRLAAHKISDYIYQKLTGQRGVFATRITYITK---AGQHNFSLNIADSDGANPQFAL 201

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            SR+ +L  P +SPN Q++AY +++    + V++ D R   A + + NF+    AP FS 
Sbjct: 202 RSREPLL-SPVWSPNGQELAYVSFETGKPV-VFMQDVR-SGARRAVANFKGSNSAPAFSP 258

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G    + +       IY +  +     +L  +  I+   ++SPD   + F SDR+G  Q
Sbjct: 259 DGGTLAVVLTLTGRSQIYLMPSKGGTPRQLMRSYSIDTEPTFSPDGQSLYFVSDRDGGPQ 318

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y +  NG   +RI+     +   P  SP G  +A+    G  + +  +    +  +LL 
Sbjct: 319 VYKVGLNGGSVQRITYSGGYN-VSPAISPDGKTLAYISQQGNSYQLWSINLATNATQLLD 377

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           + S+   P+++P+G+ +++S    G  G  L ++ ++GR   TL        +P W
Sbjct: 378 DGSDCGHPSFAPNGQIVLYS--AGGRGGEVLKTVSIDGRVRSTLSQAGVQVREPSW 431


>gi|121604951|ref|YP_982280.1| translocation protein TolB [Polaromonas naphthalenivorans CJ2]
 gi|166229983|sp|A1VNY1|TOLB_POLNA RecName: Full=Protein tolB; Flags: Precursor
 gi|120593920|gb|ABM37359.1| TolB, N-terminal domain protein [Polaromonas naphthalenivorans CJ2]
          Length = 429

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 199/407 (48%), Gaps = 15/407 (3%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFN 80
           L+  G F   S  A  +V  +    + + IA   F    +   K+  +V  DL+RS +F 
Sbjct: 15  LLAAGAFSSMSAFAQFRVEVSGVGMTQLPIAIAPFRGEAQSPQKIGSIVKADLERSGMFR 74

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
            +        + + ++ P    W   GA  +VTG V      R  V  RLWDV   + + 
Sbjct: 75  GVDAGGV---VADENTRPDLASWRQKGADAMVTGSVSPLADGRFDVRLRLWDVVREQDLG 131

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G+ +  + +  R  AH +SD +Y+ +TGEKG F++RI +V+++      + +L V D DG
Sbjct: 132 GQSYTVTKSDLRLSAHRVSDFVYEKLTGEKGIFSTRIAYVTKAGQ----RYTLWVADSDG 187

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            + +    S + I+  P +SP+  ++AY +++    + +Y  D    +  + + NFR   
Sbjct: 188 ESAQSALASPEPII-SPAWSPSGAQLAYVSFESRKPV-IYSHDVATGKR-RLLANFRGSN 244

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            AP +S +G + + ++ +     IYS+ L     +RLT +  I+   ++SPD   I F S
Sbjct: 245 SAPAWSPDGSQLVATLSQAGGSQIYSIGLNGGDPKRLTQSSSIDTEPAFSPDGRLIYFVS 304

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           DR G  Q+Y M   G + +R++     SY   PV SP G  +A+    G  F + VM+  
Sbjct: 305 DRGGSPQIYRMSPAGGNAERVT--FTGSYNISPVVSPDGRWLAYVSRVGGGFKLHVMELS 362

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 + + S  ++P+++P+ R ++++ ++ G     L +  L+G+
Sbjct: 363 TGTVTSITDTSADESPSFAPNSRLIVYATQQQGK--EALMTTTLDGK 407


>gi|171463097|ref|YP_001797210.1| Tol-Pal system beta propeller repeat protein TolB [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|171192635|gb|ACB43596.1| Tol-Pal system beta propeller repeat protein TolB [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 403

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 200/405 (49%), Gaps = 23/405 (5%)

Query: 50  IAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
           IA  +F   ++L   V+E++ +DL RS  F      +    + + D  P ++ W + GA 
Sbjct: 15  IAVMRFKDENKLLTSVTEIIRQDLARSGYFKNTENGN---AVESDDGTPNYKSWAARGAD 71

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            LV G V++ G  +  + ++L+D++    + G    SS  + R  AH I+DDI   + GE
Sbjct: 72  ALVVGSVVQTGGSQFEIHYKLFDIRKSVSLGGLNLNSSADNLRAAAHKIADDIIYKLLGE 131

Query: 170 KGDFNSRILFVSESVVSGIIKNS----LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +G        VS + +S +IK+     L + D DG NIR    S + I+  P +SP+ +K
Sbjct: 132 RG--------VSSTRLSYVIKDGKRYRLVISDADGQNIRNAMNSSEPII-SPSWSPDGKK 182

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           VAY +++D   + +Y+ +    R+   + N +    AP +S +GK+  IS+ KD    IY
Sbjct: 183 VAYVSFEDRKPV-IYVHELATGRSIS-LSNQKGNNSAPAWSPDGKKLAISLSKDGNTQIY 240

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD- 344
            ++       RLT    I+    YS D   I F SDR G  Q+Y M ++G   + + +  
Sbjct: 241 GINADGTGLHRLTRGNTIDTEPQYSADGRYIYFTSDRGGNPQIYRMSADGEQAEGVKRVT 300

Query: 345 -KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
            K+     P  SP G  +A+    G  + + ++       + L + ++ ++P+++ +GR 
Sbjct: 301 FKQGFVTSPRISPDGKYLAYIANIGGAYRLYILNLATGDAQALTDGTSDESPSFAANGRY 360

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVGFMD 447
           +++S K  G     L ++ ++G ++ +++ P      P W  FMD
Sbjct: 361 VLYSTKVGGK--RILAAVSVDGNSKRVLSIPGSDVRQPSWGPFMD 403


>gi|170730224|ref|YP_001775657.1| translocation protein TolB [Xylella fastidiosa M12]
 gi|226705900|sp|B0U2E8|TOLB_XYLFM RecName: Full=Protein tolB; Flags: Precursor
 gi|167965017|gb|ACA12027.1| TolB protein precursor [Xylella fastidiosa M12]
          Length = 439

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 215/438 (49%), Gaps = 28/438 (6%)

Query: 20  LLVLIGGFFPTSI---HAFVKVATNSANYSPVSIAFTKFVSIDELGGK---VSEVVSKDL 73
           L +L+G  FP S       + +     N +   IA       D  G     VS VV+ DL
Sbjct: 8   LAILVGLLFPLSALTQQQGLTIDIVGGNTAATPIAVLPMPYHDSAGAPATDVSGVVAADL 67

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  F  +      ++ T+   I RF  W +L    +V GRV+   +   RVE+ L+DV
Sbjct: 68  NRSGQFRTLPLGQITERPTHGSEI-RFPTWQALKQDYIVVGRVLDARQGTYRVEYELFDV 126

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
           ++ K+++G    +  ++ R +AH ++D IY+ ITG +G F +RI +V+ S   G ++ +L
Sbjct: 127 RNGKRMLGLAMTARASAMRDVAHQMADAIYEKITGLRGAFFTRIAYVTASGSHGAMRYAL 186

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V D DG N + +  S + +L  P +SP+ +K+AY +++      +Y+ D     + + +
Sbjct: 187 MVADSDGYNPQTIVRSAEPLL-SPDWSPDGKKLAYVSFEKGGS-SIYIQDIATG-SRELV 243

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +FR +  AP F+ +G R  +S+ +    +IY +DL S    +LTN+  I+    +S D 
Sbjct: 244 SSFRGINAAPSFAPDGHRIALSLSRSGNPEIYVMDLVSKQLIQLTNSFGIDTEPVWSSDG 303

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRIS------QDKEASYFDPVWSPQGDLIAFTKFS 367
             I F SDR G+ Q+Y + S G    R++           SY D         I   + S
Sbjct: 304 KFIYFTSDRGGRPQIYKVASVGGTATRVTFQGNYNATASVSYDD-------KKIVVAQGS 356

Query: 368 GEKFAIGVM-KKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G  + I +M +  GS     +   +L ++P+++P+   ++++ ++ G     LY++  + 
Sbjct: 357 GNVYRIAMMDQSSGSTVWNTLSTGSLDESPSFAPNASMVLYAAREGGR--GVLYAVSADA 414

Query: 426 R-NETLINTPAYASDPQW 442
           R  + L++  +   +P W
Sbjct: 415 RVRQRLVSVDSDVREPAW 432


>gi|15838495|ref|NP_299183.1| translocation protein TolB [Xylella fastidiosa 9a5c]
 gi|9106990|gb|AAF84703.1|AE004009_10 TolB protein precursor [Xylella fastidiosa 9a5c]
          Length = 430

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 216/436 (49%), Gaps = 28/436 (6%)

Query: 22  VLIGGFFPTSI---HAFVKVATNSANYSPVSIAFTKFVSIDELGGK---VSEVVSKDLQR 75
           +L+G  FP S       + +     N +   IA       D +G     VS VV+ DL R
Sbjct: 1   MLVGLLFPLSALTQQQGLTIDIVGGNTAATPIAVLPMPYHDSVGAPATDVSSVVAADLNR 60

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  F  +      ++ T+   I RF  W +L    +V GRV+   +   RVE+ L+DV++
Sbjct: 61  SGQFRTLPLGQIIERPTHGSEI-RFPTWQALKQDYIVVGRVLDARQGTYRVEYELFDVRN 119

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            K+++G    +  ++ R +AH ++D IY+ ITG +G F +RI +V+ S   G ++ +L V
Sbjct: 120 GKRMLGLAMTARASAMRDVAHQMADAIYEKITGLRGAFFTRIAYVTASGSHGAMRYALMV 179

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N + +  S + +L  P +SP+ +K+AY +++      +Y+ D     + + + +
Sbjct: 180 ADSDGYNPQTIVRSAEPLL-SPDWSPDGKKLAYVSFEKGG-SSIYIQDIATG-SRELVSS 236

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           FR +  AP F+ +G R  +S+ +    +IY +DL S    +LTN+  I+   ++S D   
Sbjct: 237 FRGINAAPSFAPDGHRIALSLSRSGNPEIYVMDLVSKQLIQLTNSFGIDTEPAWSSDGKF 296

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRIS------QDKEASYFDPVWSPQGDLIAFTKFSGE 369
           I F SDR G+ Q+Y + S G    R++           SY D         I   + SG 
Sbjct: 297 IYFTSDRGGRPQIYKVASVGGTATRVTFQGNYNATTSVSYDD-------KKIVVAQGSGN 349

Query: 370 KFAIGVM-KKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR- 426
            + I +M +  GS     +   +L ++P+++P+   ++++ ++ G     LY++  + R 
Sbjct: 350 VYRIAMMDQSSGSTVWNTLSTGSLDESPSFAPNASMVLYAAREGGR--GVLYAVSADARV 407

Query: 427 NETLINTPAYASDPQW 442
            + L++  +   +P W
Sbjct: 408 RQRLVSVDSDVREPAW 423


>gi|319762343|ref|YP_004126280.1| tol-pal system beta propeller repeat protein tolb [Alicycliphilus
           denitrificans BC]
 gi|330825736|ref|YP_004389039.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Alicycliphilus denitrificans K601]
 gi|317116904|gb|ADU99392.1| Tol-Pal system beta propeller repeat protein TolB [Alicycliphilus
           denitrificans BC]
 gi|329311108|gb|AEB85523.1| Tol-Pal system beta propeller repeat protein TolB [Alicycliphilus
           denitrificans K601]
          Length = 440

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 185/383 (48%), Gaps = 14/383 (3%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           K+S +V  DL+RS  F  +         T   S P    W    A  L TG V +    R
Sbjct: 68  KISAIVQADLERSGRFTGVDATGVALDET---SRPDLSQWRQRKADALSTGSVTRLADGR 124

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
             V FRLWDV   + + G+ F  + A  R +AH I+D IY+ +TGE+G F++RI +V++ 
Sbjct: 125 FDVRFRLWDVVKGQDLGGQSFTVTQADLRLVAHRIADFIYEKLTGERGVFSTRIAYVTKV 184

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                 + SL V D DG N +    S + I+  P +SP+  ++AY +++    + VY+ D
Sbjct: 185 GA----RYSLWVADADGENAQSALSSPEPII-SPAWSPSGAQLAYVSFESRKPV-VYVHD 238

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R  + I NFR    AP +S +G+   +++ +D    +Y++D       RL  +  I
Sbjct: 239 VATGRR-RLIANFRGSNSAPAWSPDGRTLAVTLSRDGGSQLYTIDANGGEPRRLMQSSGI 297

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +   ++S D   I F SDR G  Q+Y + + G + +R++ +  A    P  SP G  +A+
Sbjct: 298 DTEPAFSSDGRSIYFVSDRGGSPQIYRVAAGGGNAERVTFNG-AYNISPAISPDGQWLAY 356

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G  F + VM         L + S  ++P+++P+ R ++++ ++ G     L +  L
Sbjct: 357 ISRVGGAFKLHVMDLRSGSVTALTDSSADESPSFAPNSRLILYATQQQGR--EALMTTTL 414

Query: 424 NGR-NETLINTPAYASDPQWVGF 445
           +G+    L        +P W  F
Sbjct: 415 DGKIKARLAGQGGDIREPDWGPF 437


>gi|317402474|gb|EFV83042.1| TolB protein [Achromobacter xylosoxidans C54]
          Length = 440

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 204/420 (48%), Gaps = 19/420 (4%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
           P      V ++   A   PV+IA   F   D  G  ++EV+  DL R+  F LIS     
Sbjct: 35  PAQAQLRVDISGTGATQYPVAIA--DFAVDDAHGRALAEVIRADLTRTGQFRLISAAGSG 92

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
             + +P +     DW + GA  +  G +++    R  V +RL D   + Q+ G  F  + 
Sbjct: 93  LNVDSPIA---HDDWRAKGADFIAYGSIVRGNDGRYDVRYRLADTVKKGQLDGVAFSGTE 149

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R++AH I+D IY+ ITG +G F++RI +V +   +      L V D DG N +    
Sbjct: 150 QELRRVAHQIADRIYEKITGVRGVFSTRIAYVLKQGAT----YELQVADADGQNPQVALR 205

Query: 209 SRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           SR+ I+  P +SP+  K+AY +++  + ++ V+ + T   R P  + NF+    AP +S 
Sbjct: 206 SREPII-SPSWSPDGSKLAYVSFESGKPVVYVHTLATSA-RVP--VANFKGNNSAPGWSP 261

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +G +  +++ +D    IY V     +  +R+T +  I+   S++PD   I+F SDR G  
Sbjct: 262 DGTQLAVALTRDGLSQIYIVSAAGGSNMKRVTRSPGIDTEPSFTPDGRSIIFTSDRSGGP 321

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Q+Y    +G D +R++ +   +   P  SP G  + +       F I  +      E LL
Sbjct: 322 QIYQTGLDGGDARRLTFNGGYN-ISPRISPDGSTLLYVARRDGAFRIASLNLSSGSENLL 380

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
            +  + Q+P+++P+G  ++++  ++G   S L  +  +GR  +TL        +P W  F
Sbjct: 381 TDGRDDQSPSFAPNGMQVLYAAIQNGR--SVLAGVSSDGRVRQTLSVLNGEIREPTWGPF 438


>gi|254521375|ref|ZP_05133430.1| Tol-Pal system beta propeller repeat protein TolB [Stenotrophomonas
           sp. SKA14]
 gi|219718966|gb|EED37491.1| Tol-Pal system beta propeller repeat protein TolB [Stenotrophomonas
           sp. SKA14]
          Length = 439

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 197/382 (51%), Gaps = 12/382 (3%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           V+ VV  DL+RS  F  + +    +K      I +F  W +L    +V GRV+  G    
Sbjct: 59  VAGVVRADLERSGQFRTLPEAQIVEKPVRGGDI-QFATWRALKQNYIVVGRVLDAGAGAY 117

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RVE+ L+DV   ++++G    +   + R +AH ++D IY+ ITG +G F +RI +V+ S 
Sbjct: 118 RVEYELFDVPKGERLLGLAMTARGNAMRDVAHQMADAIYEKITGVRGAFWTRIAYVTASG 177

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
               ++ +L V D DG N + +  S + +L  P +SP+  K+AY +++  +   +Y+ + 
Sbjct: 178 KGDAMRYALMVADSDGYNPQTIVRSAEPLL-SPSWSPDGSKLAYVSFERGNSA-IYIQNI 235

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               A + + +FR +  AP FS +G++  +++ +    +IY +DL S    +LTN   I+
Sbjct: 236 ATG-ARELVTSFRGINSAPAFSPDGRKLALTLSRSGNPEIYVMDLGSKQLTQLTNHFAID 294

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAF 363
              +++PD S + F SDR G+ Q+Y + + G   +R++   + +Y   P  S  G  IA 
Sbjct: 295 TEPTWAPDGSAVYFTSDRGGRPQVYKVGAGGGSAERVT--FQGNYNAKPTVSYDGKKIAV 352

Query: 364 TKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + SG  + I +M       R   L   S  ++P+++P+   ++++ ++ G     LY++
Sbjct: 353 AQGSGNSYKIAMMDSSLGSPRWSTLSPGSLDESPSFAPNASMVLYAAREGGR--GVLYAV 410

Query: 422 DLNGR-NETLINTPAYASDPQW 442
             + R  + L+       +P W
Sbjct: 411 SADARVRQRLVLADGDVREPAW 432


>gi|197119875|ref|YP_002140302.1| TolB-like biopolymer transport periplasmic beta-propeller repeat
           protein [Geobacter bemidjiensis Bem]
 gi|197089235|gb|ACH40506.1| TolB-related biopolymer transport periplasmic beta-propeller repeat
           protein [Geobacter bemidjiensis Bem]
          Length = 407

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 198/400 (49%), Gaps = 27/400 (6%)

Query: 46  SPVSIAFTKF-VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWN 104
           +PVS     F      L G+V   VS++L  S++F +         +  P  +      +
Sbjct: 28  APVSRKLKLFPAPATGLAGQVPPEVSREL--SELFGM------DLGLAGPFEV----SGD 75

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
             GA +++      +G + + +E RL D    ++I  K++  S    R++ H  SD++ +
Sbjct: 76  GAGADLILKSSYSAQGGN-ITLECRLVDRVLNREITAKRYSGSAKELRRMGHAFSDEVLR 134

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           ++TGEKG F  +I +V+++  SG     + VMD DG N + LT +   I   P F+P+ +
Sbjct: 135 AVTGEKGPFTGKIAYVTKA--SG--NKEIFVMDYDGHNPQRLT-NNGSINLNPDFAPSGK 189

Query: 225 KVAYATY--DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           ++ Y +Y   + D+ R  L      R   R G    +     +S +G +  + + KD   
Sbjct: 190 EIIYTSYKKGNPDLYRRELFTGLEARISSRSG----LNATGAYSPDGSKIAMVMSKDGNS 245

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +IY +  +     RLTN   I++S ++SPD S+IVF SDR GK Q+++M ++G +  R++
Sbjct: 246 EIYLISREGKELARLTNNHAIDVSPAWSPDGSRIVFVSDRLGKPQVFIMNADGGNVHRLT 305

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            +  A    P WSP+GD I + +  G  F I  +  DG+Q+  L    + + P +SP GR
Sbjct: 306 ANG-AYNVTPRWSPKGDRIVYARQGGGGFQIYAINADGTQDTQLTSAGSNEHPRFSPDGR 364

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            ++FS  +DG     L   D +G+     N  +  S P W
Sbjct: 365 FIVFSSTRDGAEAIYLMRADGSGQTRVSPNK-SQNSHPTW 403


>gi|82523888|emb|CAI78611.1| tolB protein [uncultured delta proteobacterium]
          Length = 437

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 207/393 (52%), Gaps = 25/393 (6%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSF-----KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
           + +V+  D++ S  F +I+  S+     KQ I   + I  F DW+++GA++++T   I  
Sbjct: 59  LEKVLQDDIKYSSFFRIITPASYLVDPKKQGIKKKEII--FSDWSTIGAELIITTG-ITV 115

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
             ++L +E RL+DV  ++ ++G+++  + A  RK  HT  D+I +++TG  G+F ++I F
Sbjct: 116 INNKLNIELRLFDVFSKELLLGRQYNVTMAEARKSIHTFMDEIIKTMTGYPGNFLTKIAF 175

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--DDEDIL 237
           V  +     +KN +  +D DG N   +T  +  I   P +  N   + Y +Y   + D+ 
Sbjct: 176 VKSTAG---VKN-IYQVDFDGYNPTPITNFK-SITLGPSWGKNSNILFYISYFKGNPDLY 230

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
              L+  RI     +I  F+ + L+  +S   +    S+ KD   DIY ++   N   RL
Sbjct: 231 LHNLLTGRI----YKISGFKGINLSASWSDKHQMIATSLSKDGYPDIYLMNTNGNIISRL 286

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSP 356
           T +  I+IS ++SPD  +I F SDR G   +Y M SNG + +R++   E +Y   P WSP
Sbjct: 287 TRSNSIDISPTWSPDGKKIAFVSDRGGNPNIYTMNSNGQNVRRLTF--EGTYNTSPDWSP 344

Query: 357 QGDLIAFT-KFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           +GD I FT + +   F I  ++ DGS   ++    ++ + P+WSP GR +++S   +G +
Sbjct: 345 KGDNIVFTGRDNLGYFQIYTIRPDGSGLCQITFNSADNEEPSWSPDGRFIVYSSTIEGKS 404

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           G  +   +  GR + LIN     + P W   +D
Sbjct: 405 GIYIMLFNGTGRRK-LINLNGEQTYPVWSPRLD 436


>gi|149375117|ref|ZP_01892889.1| Periplasmic component of the Tol biopolymer transport system
           [Marinobacter algicola DG893]
 gi|149360481|gb|EDM48933.1| Periplasmic component of the Tol biopolymer transport system
           [Marinobacter algicola DG893]
          Length = 427

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 212/430 (49%), Gaps = 15/430 (3%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL--GGKVSEVVSKDLQ 74
           L +L+V+IG     + HA + +       S + +A   F    ++  G KVS +V  DL 
Sbjct: 4   LLMLMVMIGS--SPAAHAELLIRITEGADSAIPVAVVPFAETGQIPSGDKVSSIVRDDLT 61

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S  F  +  +      ++ D +  F+DW  LG + ++ G++ + G D++   + L+DV 
Sbjct: 62  MSGEFKPLPPEKMLSLPSSGDEV-YFRDWRLLGQRYVLVGQLTRTG-DKIEARYELFDVN 119

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             ++I+G    SS  S R +AH ISD +Y++ITG  G F++++ +V+     G     L 
Sbjct: 120 REERILGATASSSVNSTRSLAHHISDKVYEAITGVPGAFSTKLAYVTLQRSGGKALYRLQ 179

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V D DG   R    S D+ +  P +SP+ +++AY +++      +Y+ +       K I 
Sbjct: 180 VSDVDGKRARVRLES-DEPILSPAWSPDGKRLAYVSFETGKPA-IYIHELSSGNRTK-IA 236

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +FR +  AP +S +G+  L+++ KD   ++Y +D+QS + +RLT+   I+   ++     
Sbjct: 237 DFRGLNSAPAWSPDGRSLLLTLSKDGNAEVYKMDIQSRSLKRLTSHWSIDTEPTWDHTGK 296

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP--QGDLIAFTKFSGEKFA 372
              F SDR G  Q+Y   S  ++ +RI+     S ++    P   G  + +     + F 
Sbjct: 297 GFFFTSDRSGGPQIYHKSSESAEPRRITF---GSRYNARPRPDNDGKYVYYVHQRDKAFH 353

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           I        +E +L    + ++P+ SP+GR LI++ K+ GD+   + + D  G   +L  
Sbjct: 354 IARTNLQTEEETILTRTESDESPSVSPNGRMLIYATKQGGDSVLTVIAAD-GGAAYSLPA 412

Query: 433 TPAYASDPQW 442
           +     +P W
Sbjct: 413 SEGDVREPAW 422


>gi|30248242|ref|NP_840312.1| translocation protein TolB [Nitrosomonas europaea ATCC 19718]
 gi|32699691|sp|Q82XN9|TOLB_NITEU RecName: Full=Protein tolB; Flags: Precursor
 gi|30180127|emb|CAD84129.1| probable tolB-related transport protein [Nitrosomonas europaea ATCC
           19718]
          Length = 425

 Score =  159 bits (402), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 196/400 (49%), Gaps = 11/400 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M+  L    VL+  +  TS  A + +       + + IA   F     L   +S +VS D
Sbjct: 1   MRNFLYCTGVLLLLWMSTSSQAALNIEIFGGGTNKIPIAIAPFNGERGLPQSISAIVSAD 60

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+R+ +F L+  D+       P+ I R+ DW   GA  LV G +      R+ V FRL D
Sbjct: 61  LERTGLFKLV--DTLGLTSQEPEQI-RYIDWQGRGASALVVGSISPLPDGRIDVRFRLLD 117

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V  + Q+ G     +    R  AH I+D +Y+++TGE G F++RI FV +       + +
Sbjct: 118 VVKQTQLTGFSGAVTTEQLRAFAHRIADIVYETLTGEPGAFSTRIAFVRKQGS----QYA 173

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V D DG N R L    + I+  P +SP+  ++AY +++ +    V  + T   R  K 
Sbjct: 174 LQVSDYDGFNARSLIEYTEPII-SPAWSPDGSRIAYTSFEKKK--PVVYVQTLATRERKA 230

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + NF+    AP +S +G +  + +       IY ++   +  +R++ +  I+   S+SPD
Sbjct: 231 VANFKGSNSAPAWSPDGSKLAVVLTLHGGSQIYLINADGSGLQRISQSPGIDTEPSFSPD 290

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              ++F SDR G  Q+Y M  +G   +R++ + + +   P +SP G    +   +  +F 
Sbjct: 291 GRWLMFTSDRGGSPQIYRMPVSGGVAERMTFEGDYN-VSPHYSPDGKRFVYIHRNAGRFN 349

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           + +      Q +LL + +  ++P++SP+ R ++++ +  G
Sbjct: 350 VAIQDLSTRQMQLLTDSNFDESPSFSPNNRMILYTTEIGG 389



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 13/160 (8%)

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            R+ + ++  ++      S++I F   +  +  L V   +G + + + +  E     P W
Sbjct: 141 HRIADIVYETLTGEPGAFSTRIAFVRKQGSQYALQVSDYDGFNARSLIEYTEP-IISPAW 199

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDG 412
           SP G  IA+T F  +K  + V +   ++ER  V +   +  AP WSP G  L       G
Sbjct: 200 SPDGSRIAYTSFEKKKPVVYV-QTLATRERKAVANFKGSNSAPAWSPDGSKLAVVLTLHG 258

Query: 413 DTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGF 445
             GS++Y I+ +G     I+        P+++ D +W+ F
Sbjct: 259 --GSQIYLINADGSGLQRISQSPGIDTEPSFSPDGRWLMF 296



 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 86/166 (51%), Gaps = 9/166 (5%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + +++ DG+ ++ ++ S   I  EP FSP+ + + + T D     ++Y M      A + 
Sbjct: 262 IYLINADGSGLQRISQS-PGIDTEPSFSPDGRWLMF-TSDRGGSPQIYRMPVSGGVAERM 319

Query: 253 I--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              G++    ++P +S +GKR +   +     ++   DL +   + LT++ F + S S+S
Sbjct: 320 TFEGDYN---VSPHYSPDGKRFVYIHRNAGRFNVAIQDLSTRQMQLLTDSNF-DESPSFS 375

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           P++  I++ ++  G+  L  + S+G  + R+SQ+   +  + VW P
Sbjct: 376 PNNRMILYTTEIGGRGILSTVSSDGQAKSRLSQEA-GNIREAVWGP 420


>gi|78485243|ref|YP_391168.1| TolB-like [Thiomicrospira crunogena XCL-2]
 gi|119371064|sp|Q31H79|TOLB_THICR RecName: Full=Protein tolB; Flags: Precursor
 gi|78363529|gb|ABB41494.1| TolB protein [Thiomicrospira crunogena XCL-2]
          Length = 432

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 209/407 (51%), Gaps = 20/407 (4%)

Query: 27  FFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGG-------KVSEVVSKDLQRSDVF 79
            + TS++A + +  + ++ + V IA   F    E  G        ++ +V  DL RS  F
Sbjct: 14  MWSTSVYADLTIQIDQSSDNAVPIALVPF----EWKGAQLHPPQNITSIVGNDLLRSGKF 69

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
             + +     +    D I  +Q W  LG   L+ GR+ +E     ++E R  D+  ++Q+
Sbjct: 70  KAVDEAKLPSRPKTLDDIDFYQ-WKQLGVDNLLMGRITEEANGTYQIEMRFVDLLRKEQV 128

Query: 140 IGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           IGK++   S +  R++AH +SD IY+ +TG +G FN+R+ +V+   V G  + SL V D 
Sbjct: 129 IGKRWSGISKSLLRQVAHKMSDLIYEELTGIRGAFNTRMAYVTVRNVKGKKQYSLEVADS 188

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFR 257
           DG N + +  S   I+  P +SP+ Q +AY ++++    R  ++   +D   ++I   F+
Sbjct: 189 DGYNSQPILRSSLPIM-SPSWSPDGQHLAYVSFENG---RSQIVLQSLDGKSRQIIAKFK 244

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            +  AP +S +GK+  +++ KD + D+Y +D+++    RLT    I   A ++P+   + 
Sbjct: 245 GINGAPAWSPDGKKLALTLSKDGSADVYIMDMKTRKLRRLTRNWAIETEAVWAPNGHSLF 304

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SDR G+ Q++ +  +  + +RIS     +  +P  SP G  +A    +G  F I V+ 
Sbjct: 305 FNSDRRGQPQIFQVFLDTGEMRRISYVGRYNA-NPAISPDGRYVAMVHANG-GFHIAVLD 362

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  +L +    ++PT+SP+G  ++++  + G     + S++ N
Sbjct: 363 LYNEDFNILTKTYLDESPTFSPNGEMILYAMNQGGQGKLAVVSVNSN 409


>gi|121607999|ref|YP_995806.1| translocation protein TolB [Verminephrobacter eiseniae EF01-2]
 gi|121552639|gb|ABM56788.1| TolB, N-terminal domain protein [Verminephrobacter eiseniae EF01-2]
          Length = 421

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 192/411 (46%), Gaps = 12/411 (2%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK-QKITNPD 95
           +V       + + IA   F    +   K++ +V  DL+RS  F  +  D     + T PD
Sbjct: 18  RVEVTGVGLTQLPIALAPFRGQAQAPQKMAAIVQADLERSGQFRAVDADGAALDETTRPD 77

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
                  W    A  L+ G V      R  V FRLWDV   + + G+ F  +P   R +A
Sbjct: 78  ----LALWRKKNADSLLAGSVALSSNGRFDVRFRLWDVVKGQDLGGQSFLVTPGDLRLVA 133

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H I+D I++ +TGE+G F++RI +V+ +      + SL V D DG N +    S + I+ 
Sbjct: 134 HRIADFIHEKLTGERGVFSTRIAYVTRTTNRTGARYSLWVADADGENAQSALSSPESII- 192

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +SP   ++AY +++    + VY+ D    R  + I NFR    AP ++ +G+   ++
Sbjct: 193 SPAWSPLGDQLAYVSFESRKPV-VYVHDVASGRR-RLIANFRGSNSAPAWAPDGRTLAVT 250

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + +D    +Y++D       RL  +  I+   ++S D   I F SDR G  Q+Y +  +G
Sbjct: 251 LSRDGGSQLYTIDANGGEPRRLMQSAGIDTEPAFSGDGRSIYFVSDRGGAPQIYKVGVSG 310

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            D +R++     +   P  SP G  +A+   +G  F + VM         + + +  + P
Sbjct: 311 GDAERVTFTGNYN-ISPSVSPDGRWLAYISRAGGAFKLQVMDLVSGSVNAITDTTADENP 369

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
           +++P+ R ++++ ++ G     L +  L+G+    L        +P W  F
Sbjct: 370 SFAPNSRLIVYATEQQGR--EALMTTTLDGKIKARLAGQAGDIREPDWGPF 418


>gi|329904215|ref|ZP_08273698.1| tolB protein precursor [Oxalobacteraceae bacterium IMCC9480]
 gi|327548111|gb|EGF32832.1| tolB protein precursor [Oxalobacteraceae bacterium IMCC9480]
          Length = 421

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 206/436 (47%), Gaps = 18/436 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           MK      L L+G    T+ HA ++V       + + IA   F        +VS ++  D
Sbjct: 1   MKKTFFSTLALLGLVLATAAHAQLRVDIAGVGANQIPIAIATFADESIAPAQVSAIIKAD 60

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L RS  F +I   +  +      S   + DW S GA  LV G V +    R  V ++L D
Sbjct: 61  LMRSGYFKIIDAGTMSET-----SEINYPDWKSRGADALVVGSVQRLADGRFDVRYKLLD 115

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           +     +      +     R  AH I+DDIY+ +TG +G F +RI +V++S      +  
Sbjct: 116 MIKSAPLSALSLTAPEGRTRVTAHKIADDIYEKLTGVRGAFATRIAYVTKSGK----EYR 171

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V D DG +      S + I+  P +SP+  +VAY +++++  + VY+ +  + R    
Sbjct: 172 LEVADADGEDTNVALRSNEPII-SPAWSPDGTRVAYVSFENKKPV-VYVQNL-VTRQRTV 228

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + N++    AP +S +G R  I++ +D     Y V+       RLT++  I+    +S D
Sbjct: 229 LANYKGSNSAPSWSPDGNRLAIALSRDGLTQSYIVNADGTGLRRLTSSSGIDTEPQFSAD 288

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKF 371
              I F SDR G  Q+Y M  +G D +R++   + SY   P  SP G  +A+       F
Sbjct: 289 GQSIYFTSDRSGGPQIYKMPVSGGDAQRVT--FKGSYNISPRVSPDGKTLAYISRRDSAF 346

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +  M     QE+ L + +  ++P++SP+ + ++++  + G  GS L  + ++GR +  +
Sbjct: 347 QLYAMDLANGQEQRLSDSAKDESPSFSPNSKYIMYA-TESGRRGS-LAVVSVDGRVKQRL 404

Query: 432 NTPAY-ASDPQWVGFM 446
            T A    +P W  F+
Sbjct: 405 TTQAGDIREPTWGPFI 420


>gi|194366891|ref|YP_002029501.1| translocation protein TolB [Stenotrophomonas maltophilia R551-3]
 gi|194349695|gb|ACF52818.1| Tol-Pal system beta propeller repeat protein TolB [Stenotrophomonas
           maltophilia R551-3]
          Length = 439

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 197/382 (51%), Gaps = 12/382 (3%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           V+ VV  DL+RS  F  + +    +K      I +F  W +L    +V GRV+  G    
Sbjct: 59  VAGVVRADLERSGQFRTLPEAQIVEKPVRGGDI-QFATWRALKQNYIVVGRVLDAGAGAY 117

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RVE+ L+DV   ++++G    +   + R +AH ++D IY+ ITG +G F +RI +V+ S 
Sbjct: 118 RVEYELFDVPKGERLLGLAMTARGNAMRDVAHQMADAIYEKITGVRGAFWTRIAYVTASG 177

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
               ++ +L V D DG N + +  S + +L  P +SP+  K+AY +++  +   +Y+ + 
Sbjct: 178 KGDAMRYALMVADSDGFNPQTIVRSAEPLL-SPSWSPDGSKLAYVSFERGNSA-IYIQNI 235

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               A + + +FR +  AP FS +G++  +++ +    +IY +DL S    +LTN   I+
Sbjct: 236 GTG-ARELVTSFRGINSAPAFSPDGRKLALTLSRSGNPEIYVMDLGSKQLAQLTNHFAID 294

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAF 363
              +++PD S + F SDR G+ Q+Y + + G   +R++   + +Y   P  S  G  IA 
Sbjct: 295 TEPTWAPDGSAVYFTSDRGGRPQVYKVGAGGGSAERVT--FQGNYNAKPSVSYDGKKIAV 352

Query: 364 TKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + SG  + I +M       R   L   S  ++P+++P+   ++++ ++ G     LY++
Sbjct: 353 AQGSGNSYKIAMMDSSLGSPRWSTLSPGSLDESPSFAPNASMVLYAAREGGR--GVLYAV 410

Query: 422 DLNGR-NETLINTPAYASDPQW 442
             + R  + L+       +P W
Sbjct: 411 SADARVRQRLVLADGDVREPAW 432


>gi|332286926|ref|YP_004418837.1| TolB protein [Pusillimonas sp. T7-7]
 gi|330430879|gb|AEC22213.1| TolB protein [Pusillimonas sp. T7-7]
          Length = 436

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 214/449 (47%), Gaps = 25/449 (5%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           MSLR+         + + LL++ +    P+  HA ++V  +    +   IA   F S D 
Sbjct: 11  MSLRWRA-----WALGIFLLVISLAAARPS--HAQLRVDISGVGATQYPIAIADF-SGDA 62

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
            G  VSEV+  DL RS  F L++         N +S    ++W   GA  L  G + + G
Sbjct: 63  QGQNVSEVIRADLTRSGQFRLVNATGAN---LNTESTIAHEEWRGRGADYLAYGSISQSG 119

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
             +  V +RL D   + Q+ G  F  +    R+I+H I+D IY+ ITG +G F++RI +V
Sbjct: 120 -GQYSVSYRLVDTVRKTQLDGVAFSGTEKELRRISHQIADRIYEKITGVRGVFSTRIAYV 178

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            ++  +      L + D DG N + +  S+  I+  P +SP+ +++AY +++    +   
Sbjct: 179 LQTGNT----YELQIADADGQNPQVMLRSKQSII-SPAWSPDGKRLAYVSFETGKPVVYV 233

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              +   R P  + NF+    AP +S NG+   I + +D    IY+++   +   R+  +
Sbjct: 234 QTLSSGQRVP--LANFKGNNSAPAWSPNGQNLAIVLSRDSISQIYTINADGSGLRRVMRS 291

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGD 359
             I+    Y+ D   ++F SDR G   +Y +  +G D +RI+ +   SY   P  SP G+
Sbjct: 292 PMIDTEPQYTADGGSLIFTSDRGGSPHIYKVPVSGGDAQRITFN--GSYNISPAISPDGN 349

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            + +       F I +       E+LL    + ++P+++P+G  +++S  + G +   + 
Sbjct: 350 SLVYVTRRNGAFRIALQNMGSGSEQLLTAGPDDESPSFAPNGMQILYSSVQGGRSVLAVT 409

Query: 420 SIDLNGR-NETLINTPAYASDPQWVGFMD 447
           S+D  GR  +TL        +P W  F +
Sbjct: 410 SVD--GRVRQTLSALNGKVREPTWGPFTN 436


>gi|308271861|emb|CBX28469.1| Protein tolB [uncultured Desulfobacterium sp.]
          Length = 450

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 201/390 (51%), Gaps = 21/390 (5%)

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPR---FQDWNSLGAQVLVTGRV 116
           +L  K S+++S  L  +  F ++ ++SF + +  P++  +   F++W ++GA++LVTG +
Sbjct: 68  QLPKKASDMLSGMLDFTGYFKILDRESFLENLLKPETTLQTVDFRNWTTVGAELLVTGTI 127

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
              G D L +E RL+D     Q++GKK+       R I    + +I   +TG +G F++R
Sbjct: 128 QANGND-LEIEMRLFDTVKANQLVGKKYKGGVNDLRHILRLFASEIVFCLTGNRGVFDTR 186

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--DDE 234
           I FVS    +G  K  + + D DG N+R  T +    LF P +S + Q +AY +Y   + 
Sbjct: 187 IAFVS----TGSGKKEIYICDFDGTNVRQFTKNNSITLF-PAWSSDGQWIAYTSYLKGNP 241

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D+    + +  I    K+  N     +  +F      A +S   D+  DIY +       
Sbjct: 242 DLYIKNVSNNSISVVSKKGINITPSWMPGKFE---LAATLSFSGDQ--DIYLMTGTGKII 296

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           ++LTN+   ++S ++SPD  ++ F S R G  Q+Y+   +  +++R++ +   +   P W
Sbjct: 297 KKLTNSTGSDVSPTFSPDGKKMAFVSSRSGTPQIYIQDISTGNEQRLTFNGRYNT-QPCW 355

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           SP+G+ I ++   G K  I ++  DG    +L   + + ++P WSP G  ++FS  ++G 
Sbjct: 356 SPKGNKIVYSGLDGGKHNIFIIALDGKDPVQLTHNEGDNESPFWSPDGSLIVFSSTREGP 415

Query: 414 TGSKLYSIDLNGRNET-LINTPAYASDPQW 442
             S++Y +   G ++  L +     S+P+W
Sbjct: 416 --SRIYVMTSYGTDQKRLFSISGEQSNPKW 443


>gi|88810552|ref|ZP_01125809.1| TolB [Nitrococcus mobilis Nb-231]
 gi|88792182|gb|EAR23292.1| TolB [Nitrococcus mobilis Nb-231]
          Length = 433

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 189/365 (51%), Gaps = 16/365 (4%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPR--FQDWNSLGAQVLVTGRVIKE---GKD 122
           ++  DL R+ +   + +   K  I +P ++    FQ+W  LG   LV G +  +   G  
Sbjct: 59  IIRDDLYRTGLLQPLPR---KDLIAHPATLEEVNFQNWRVLGVDNLVVGALASDPDSGYH 115

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
             +V F L DV    ++ GK++   P + R + HTISD I+QS+ G  G FN++I +V  
Sbjct: 116 GYQVSFELLDVYKANRLTGKRYRVRPDALRTLGHTISDIIFQSLFGRPGGFNTQIAYVEI 175

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
              +    + L V D DG N + +  S+  I+  P +SP++Q++ Y ++++     VY+ 
Sbjct: 176 ERNADQPVHKLIVADADGHNPQVILTSKAPIM-SPAWSPDRQRIGYVSFENGRS-EVYVQ 233

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +    +  + + +F  +  AP +S  G R  +++ KD   +IY +DL S +  ++T+   
Sbjct: 234 EVASGKR-RTVASFNGINSAPAWSPQGNRLALTLSKDGNPEIYILDLASESLRQITHNSS 292

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLI 361
           I+    ++P+  QI+F SDR G  Q+Y + S G   +R++   E SY   P  SP G L+
Sbjct: 293 IDTEPVWTPNGQQIIFTSDRGGSPQIYRLPSAGGKAERLT--FEGSYNARPTLSPDGRLL 350

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A       KF I V+       R+L +    ++P+++P+G +L++S    G   S+L ++
Sbjct: 351 ALVHREDGKFKIAVLDLQTRLTRVLTDGPLDESPSFAPNGATLLYSSVLGGK--SELATV 408

Query: 422 DLNGR 426
            + GR
Sbjct: 409 SIYGR 413


>gi|190575562|ref|YP_001973407.1| translocation protein TolB [Stenotrophomonas maltophilia K279a]
 gi|190013484|emb|CAQ47119.1| putative tolB protein precursor [Stenotrophomonas maltophilia
           K279a]
          Length = 439

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 197/382 (51%), Gaps = 12/382 (3%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           V+ VV  DL+RS  F  + +    +K      I +F  W +L    +V GRV+  G    
Sbjct: 59  VAGVVRADLERSGQFRTLPEAQIVEKPVRGGDI-QFATWRALKQNYIVVGRVLDAGAGAY 117

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RVE+ L+DV   ++++G    +   + R +AH ++D IY+ ITG +G F +RI +V+ S 
Sbjct: 118 RVEYELFDVPKGERLLGLAMTARGNAMRDVAHQMADAIYEKITGVRGAFWTRIAYVTASG 177

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
               ++ +L V D DG N + +  S + +L  P +SP+  K+AY +++  +   +Y+ + 
Sbjct: 178 KGDAMRYALMVADSDGFNPQTIVRSAEPLL-SPSWSPDGSKLAYVSFERGNSA-IYIQNI 235

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               A + + +FR +  AP FS +G++  +++ +    +IY +DL S    +LTN   I+
Sbjct: 236 GTG-ARELVTSFRGINSAPAFSPDGRKLALTLSRSGNPEIYVMDLGSKQLTQLTNHFAID 294

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAF 363
              +++PD S + F SDR G+ Q+Y + + G   +R++   + +Y   P  S  G  IA 
Sbjct: 295 TEPTWAPDGSAVYFTSDRGGRPQVYKVGAGGGSAERVT--FQGNYNAKPSVSYDGKKIAV 352

Query: 364 TKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + SG  + I +M       R   L   S  ++P+++P+   ++++ ++ G     LY++
Sbjct: 353 AQGSGNSYKIAMMDSSLGSPRWSTLSPGSLDESPSFAPNASMVLYAAREGGR--GVLYAV 410

Query: 422 DLNGR-NETLINTPAYASDPQW 442
             + R  + L+       +P W
Sbjct: 411 SADARVRQRLVLADGDVREPAW 432


>gi|237748799|ref|ZP_04579279.1| TolB [Oxalobacter formigenes OXCC13]
 gi|229380161|gb|EEO30252.1| TolB [Oxalobacter formigenes OXCC13]
          Length = 423

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 207/402 (51%), Gaps = 21/402 (5%)

Query: 47  PVSIA-FTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNS 105
           P+ IA F+   +  E   KV+ ++  DL R+ +F LI  D+   +  + D    ++ W +
Sbjct: 40  PIVIAGFSNEATAPE---KVTNIIKADLARTGMFRLIGTDAIIGESADID----YRKWRA 92

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
            GA  LV G ++K    ++ V +RL+D+    Q+      +  +  R  AH I+DDIY+ 
Sbjct: 93  QGADALVVGTLVKSPDGKIDVRYRLFDLGKSSQLSALSMLAPASMTRVTAHKIADDIYEK 152

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +TG KG F + I +V+++      +  L + D DG N      S++ I+  P +SP+  +
Sbjct: 153 LTGHKGIFATCIAYVTKTGN----EYRLEIADADGGNKLVALRSKEPII-SPSWSPDGTR 207

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           VAY +++ +  + VY+ +  + R    + N++    AP +S +G R  +++ KD    +Y
Sbjct: 208 VAYVSFEAKKPV-VYVQNL-VTRQRTMVANYKGNNSAPSWSPDGSRLAVALSKDGYTQVY 265

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           +V     A +++T T  IN    +SPD   I F SDR G  Q+Y +  NG + +R++   
Sbjct: 266 TVSANGGALKQITQTRSINTEPQFSPDGQWIYFTSDRSGGPQIYKVGVNGGNPQRVTFHG 325

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +   P  SP G  +A+    G  + + ++     QE+ L + S  ++P++SP+G+ ++
Sbjct: 326 NYN-ISPRVSPDGKSLAYISRRG-GYQLYLLDLTNGQEQRLSDTSRDESPSFSPNGQFIM 383

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVGFM 446
           ++   +G  G+ L  + ++GR +  ++  A    +P W  FM
Sbjct: 384 YA--TNGGRGA-LSVVSVDGRVKQRLSMKASDVREPSWGPFM 422


>gi|92113976|ref|YP_573904.1| translocation protein TolB [Chromohalobacter salexigens DSM 3043]
 gi|119371041|sp|Q1QWF3|TOLB_CHRSD RecName: Full=Protein tolB; Flags: Precursor
 gi|91797066|gb|ABE59205.1| TolB-like protein [Chromohalobacter salexigens DSM 3043]
          Length = 428

 Score =  157 bits (398), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 218/439 (49%), Gaps = 18/439 (4%)

Query: 14  KINL---CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           ++NL    LLL+L  G      HA + +     +   + IA     + D+L   VS +VS
Sbjct: 3   RLNLWAASLLLMLCAGM----AHAELTIEITKGSDQAIPIAIVPMANGDDLPENVSRIVS 58

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+RS  F  + ++S   + ++ + +  +QDW  L +  LV G++  +G +  R+++ L
Sbjct: 59  NDLERSGRFEPLPRESLISRPSSSEEV-HYQDWQQLDSDYLVVGKIDNQGGE-YRIQYEL 116

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
            +V  + +++G+   SS    R  AH ISD I++ ITG +G F++ I +V+ S V   I 
Sbjct: 117 LNVNGQNRMLGEVVTSSRDQLRDSAHYISDQIFEEITGIRGAFSTSIAYVTASGVGDDID 176

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L V D DG N + +  S D+ +  P +SP+  K+AY ++ +     +Y+ +    +  
Sbjct: 177 YALSVADADGHNSQQIL-SSDEPILSPAWSPDGGKLAYVSF-ETGRPGIYVQNLATGQR- 233

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            R+ +F  +  AP +S +G++  +S+ KD   +IY +D+ S    RLT +  I+    ++
Sbjct: 234 VRLTSFEGINGAPAWSPDGRKLAMSLSKDGQPEIYVMDIASRDLRRLTQSDAIDTEPEWA 293

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGE 369
           P+   ++F SDR G  Q+Y         +R++     SY     +SP GD I        
Sbjct: 294 PNGRSLIFTSDRSGNPQIYRYDLGSGRAERLT--FTGSYNSRGRFSPDGDAIFMVTRDDS 351

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + +     D  +  +L +    ++P+ +P+G  +IF+ ++   T   L ++  +G    
Sbjct: 352 GYHVARQDLDTDRMTILTDSDWDESPSVAPNGTMVIFATQE--GTRGVLGAVSADGSASF 409

Query: 430 LINTP-AYASDPQWVGFMD 447
            + +P     +P W  F+D
Sbjct: 410 RLPSPQGDVREPAWSPFLD 428


>gi|253997444|ref|YP_003049508.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Methylotenera mobilis JLW8]
 gi|253984123|gb|ACT48981.1| Tol-Pal system beta propeller repeat protein TolB [Methylotenera
           mobilis JLW8]
          Length = 433

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 217/434 (50%), Gaps = 29/434 (6%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK--VSEVVSKDLQR 75
           C L V       +  HA +++  +  N   + IA   F + D +  +  ++ ++S DL+R
Sbjct: 15  CTLTV--SAMMTSVSHAALEIEISGGNAQQLPIAIVPF-NQDAVKNQENIANIISADLRR 71

Query: 76  SDVFNLISQDSFKQKITNPDSIP--RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
           S +F ++       K   P +I   ++ DW SL AQ +  G+V     +RL+V F+L DV
Sbjct: 72  SGMFRVLETAGVASK---PSTIAQVKYSDWASLQAQAIAVGKVEALPGNRLKVSFQLGDV 128

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
             + Q+    +  +P+  R  AH I+D IYQ +TGE   F SRI ++++S      + +L
Sbjct: 129 LKQTQLADMDYNITPSQLRMTAHKIADVIYQKLTGESAIFASRIAYINKSKG----RYAL 184

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED---ILRVYLMDTRIDRAP 250
            V D DG N + +  S + I+  P +SP+  K+AY +++ +     ++  +   RI    
Sbjct: 185 QVADADGVNPQTVVSSNEPII-SPAWSPDGTKIAYVSFEKKKPIIFVQSLMTGQRIT--- 240

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             + +F+    AP ++ +G +  I +       +Y ++   +  ++L+ +  I+    +S
Sbjct: 241 --LASFKGNNSAPAWAPDGSKLAIVLTHAANSQLYLINADGSGLKQLSKSSAIDTEPVWS 298

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGE 369
           PD+  + F SDR G  Q+Y + S G D +R++ D   +Y   P +SP G  +A  +  G 
Sbjct: 299 PDAKWVYFSSDRGGSPQIYKVSSLGGDAQRVTFD--GTYNLSPRFSPDGKSLAMIRNDGG 356

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NE 428
           ++ + +      Q ++L E +  ++P+++P+GR ++++ +  G     L ++  +GR  +
Sbjct: 357 RYRVALQNLATGQVQILSEGNQDESPSFAPNGRVVLYATRSAGR--GALAAVSADGRVKQ 414

Query: 429 TLINTPAYASDPQW 442
            L  +     +P W
Sbjct: 415 RLSESGGDIREPAW 428


>gi|182681495|ref|YP_001829655.1| translocation protein TolB [Xylella fastidiosa M23]
 gi|182631605|gb|ACB92381.1| Tol-Pal system beta propeller repeat protein TolB [Xylella
           fastidiosa M23]
          Length = 474

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 221/456 (48%), Gaps = 28/456 (6%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSI---HAFVKVATNSANYSPVSIAFTKFVSI 58
           S+ F    +L+M      L +L+G  FP S       + +     N +   IA       
Sbjct: 25  SIIFLKVIDLHMTKFPRWLAMLVGLLFPLSALTQQQGLTIDIVGGNTAATPIAVLPMPYH 84

Query: 59  DELGGK---VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR 115
           D  G     VS VV+ DL RS  F  +      ++ T+   I RF  W +L    +V GR
Sbjct: 85  DSAGAPATDVSGVVAADLNRSGQFRTLPLGQITERPTHGSEI-RFPTWQALKQDYIVVGR 143

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V+   +   RVE+ L+DV++ K+++G    +  ++ R +AH ++D IY+ ITG +G F +
Sbjct: 144 VLDARQGTYRVEYELFDVRNGKRMLGLAMTARASAMRDVAHQMADAIYEKITGLRGAFFT 203

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI +V+ S   G ++ +L V D DG N + +  S + +L  P +S + +K+AY +++   
Sbjct: 204 RIAYVTASGSHGAMRYALMVADSDGYNPQTIVRSAEPLL-SPDWSSDGKKLAYVSFEKGG 262

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +Y+ D     + + + +FR +  AP F+ +G R  +S+ +    +IY +DL S    
Sbjct: 263 S-SIYIQDIATG-SRELVSSFRGINAAPSFAPDGHRIALSLSRSGNPEIYVMDLVSKQLI 320

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------QDKEASY 349
           +LTN+  I+    +S D   I F SDR G+ Q+Y + S G    R++           SY
Sbjct: 321 QLTNSFGIDTEPVWSSDGKFIYFTSDRGGRPQIYKVASVGGAATRVTFQGNYNASASVSY 380

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVM-KKDGSQERLLVEDSNL-QAPTWSPSGRSLIFS 407
            D         I   + SG  + I +M +  GS     +   +L ++P+++P+   ++++
Sbjct: 381 DD-------KKIVVAQGSGNVYRIAMMDQSSGSTVWNTLSTGSLDESPSFAPNASMVLYA 433

Query: 408 RKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
            ++ G     LY++  + R  + L++  +   +P W
Sbjct: 434 AREGGR--GVLYAVSADARVRQRLVSVDSDVREPAW 467


>gi|187479385|ref|YP_787410.1| translocation protein TolB [Bordetella avium 197N]
 gi|119371036|sp|Q2KV91|TOLB_BORA1 RecName: Full=Protein tolB; Flags: Precursor
 gi|115423972|emb|CAJ50525.1| TolB protein [Bordetella avium 197N]
          Length = 441

 Score =  157 bits (396), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 200/416 (48%), Gaps = 17/416 (4%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
           HA ++V  +    +   IA   F   D  G  ++EV+  DL R+  F LI+       + 
Sbjct: 38  HAQLRVDISGTGATQYPIAIADFAGDDVRGRALAEVIRADLTRTGQFRLINAAGSGLTVD 97

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
           +P +   + DW   GA  +  G + +    R  + +RL D   + Q+ G  F  +    R
Sbjct: 98  SPIN---YDDWRGRGADYVAYGSISQGADGRFEIRYRLADTVKKNQLDGVAFSGTEPELR 154

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +IAH I+D IY+ ITG +G F +RI +V +   +      L V D DG N +    SR+ 
Sbjct: 155 RIAHQIADRIYEKITGVRGVFATRIAYVLKQGNT----YELQVADADGQNPQVALRSREP 210

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           I+  P +SP+  K+AY ++     + VY+  T   R+   + NF+    AP +S +G + 
Sbjct: 211 II-SPTWSPDGSKLAYVSFHSGKPV-VYVQ-TLATRSQIPVANFKGNNSAPAWSPDGSQL 267

Query: 273 LISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +++ +D    IY V    +A   R+T +  I+   +++PD   I+F SDR G  Q+Y +
Sbjct: 268 AVALTQDGLSQIYIVSADGSAKPRRITRSPGIDTEPTFTPDGRSIIFTSDRSGGPQIYQV 327

Query: 332 QSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             +G D +R++ +   SY   P  SP G  + +       F I  +      E LL +  
Sbjct: 328 GLDGGDARRLTFN--GSYNISPRISPDGSTLLYVARRDGAFRIASLNLPTGTETLLTDGR 385

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
           + Q+P+++P+G  ++++  ++G   S L  +  +GR  +TL        +P W  F
Sbjct: 386 DDQSPSFAPNGMQVLYAATQNGR--SVLAGVSSDGRVRQTLSVLNGEIREPTWGPF 439


>gi|56476928|ref|YP_158517.1| translocation protein TolB [Aromatoleum aromaticum EbN1]
 gi|67461905|sp|Q5P4Z6|TOLB_AZOSE RecName: Full=Protein tolB; Flags: Precursor
 gi|56312971|emb|CAI07616.1| tolB protein precursor, periplasmic component of the Tol biopolymer
           transport system [Aromatoleum aromaticum EbN1]
          Length = 426

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 207/410 (50%), Gaps = 20/410 (4%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           +++    A   PV+I    F +   L   +++VV  DL+RS +F+L+         T   
Sbjct: 29  IEITGAGATRFPVAIPL--FENEGSLPRGITDVVRADLERSGLFSLVDMGLVTLPAT--- 83

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
           ++P      + GA  ++ G +  +   R  V FRL+D + + ++ G     +PA  R  A
Sbjct: 84  AVPDLAGVRARGADAVLAGSLYPQADGRYDVRFRLFDTQKQTELGGLSLRMTPAQNRATA 143

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H I+D +Y+ +TG+ G F +RI +V   V SG  +  L + D DG N +    SR+ I+ 
Sbjct: 144 HRIADFVYEKLTGQPGYFATRIAYV---VKSG-PRYELQIADADGMNAQTALASREPII- 198

Query: 216 EPRFSPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            P ++P+ Q++AY +++  + ++ V+ + T        + NF+    AP ++ +G+R  +
Sbjct: 199 SPAWAPDGQRLAYVSFEAKKPVVYVHTLATGQRHV---VANFKGSNSAPTWAPDGQRLAV 255

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + KD    +Y ++   +   R+  +  I+   ++SPD   I F SDR G  Q+Y + ++
Sbjct: 256 VLTKDGQSQLYVLNADGSGLRRMATSPGIDTEPAWSPDGEWIYFSSDRGGSAQIYRIPAS 315

Query: 335 GSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           G   +R++   E +Y   P  SP G  +AF   +  +F + VM     Q  +L + S  +
Sbjct: 316 GGSAQRVT--FEGNYNVTPRLSPDGRSLAFITRNNGRFQVAVMDLATRQTTILTDSSRDE 373

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQW 442
           +P+++P+GR ++++ +  G     L ++  +GR +  ++  A    +P W
Sbjct: 374 SPSFAPNGRMILYATESGGR--GVLAAVSSDGRVKQRLSVQAADVREPSW 421


>gi|71901735|ref|ZP_00683807.1| TolB, N-terminal [Xylella fastidiosa Ann-1]
 gi|71728507|gb|EAO30666.1| TolB, N-terminal [Xylella fastidiosa Ann-1]
          Length = 474

 Score =  156 bits (395), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 221/456 (48%), Gaps = 28/456 (6%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSI---HAFVKVATNSANYSPVSIAFTKFVSI 58
           S+ F    +L+M      L +L+G  FP S       + +     N +   IA       
Sbjct: 25  SIIFLKVIDLHMTKFPRWLAMLVGLLFPLSALTQQQGLTIDIVGGNTAATPIAVLPMPYH 84

Query: 59  DELGGK---VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR 115
           D  G     VS VV+ DL RS  F  +      ++ T+   I RF  W +L    +V GR
Sbjct: 85  DSAGAPATDVSGVVAADLNRSGQFRTLPLGQITERPTHGSEI-RFPIWQALKQDYIVVGR 143

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V+   +   RVE+ L+DV++ K+++G    +  ++ R +AH ++D IY+ ITG +G F +
Sbjct: 144 VLDARQGTYRVEYELFDVRNGKRMLGLAMTARASAMRDVAHQMADAIYEKITGLRGAFFT 203

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI +V+ S     ++ +L V D DG N + +  S + +L  P +SP+ +K+AY +++   
Sbjct: 204 RIAYVTASGSHRAMRYALMVADSDGYNPQTIVRSAEPLL-SPDWSPDGKKLAYVSFEKGG 262

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +Y+ D     + + + +FR +  AP F+ +G R  +S+ +    +IY +DL S    
Sbjct: 263 S-SIYIQDIATG-SRELVSSFRGINAAPSFAPDGHRIALSLSRSGNPEIYVMDLVSKQLI 320

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------QDKEASY 349
           +LTN+  I+    +S D   I F SDR G+ Q+Y + S G    R++           SY
Sbjct: 321 QLTNSFGIDTEPVWSSDGKFIYFTSDRGGRPQIYKVASVGGAATRVTFQGNYNASASVSY 380

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVM-KKDGSQERLLVEDSNL-QAPTWSPSGRSLIFS 407
            D         I   + SG  + I +M +  GS     +   +L ++P+++P+   ++++
Sbjct: 381 DD-------KKIVVAQGSGNVYRIAMMDQSSGSTVWNTLSTGSLDESPSFAPNASMVLYA 433

Query: 408 RKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
            ++ G     LY++  + R  + L++  +   +P W
Sbjct: 434 AREGGR--GVLYAVSADARVRQRLVSVDSDVREPAW 467


>gi|254448714|ref|ZP_05062172.1| Tol-Pal system beta propeller repeat protein TolB [gamma
           proteobacterium HTCC5015]
 gi|198261722|gb|EDY86009.1| Tol-Pal system beta propeller repeat protein TolB [gamma
           proteobacterium HTCC5015]
          Length = 442

 Score =  156 bits (394), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 207/413 (50%), Gaps = 11/413 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           +++  +S    P++I   ++     L   VS VV  DL+RS  F  ++++    K +   
Sbjct: 34  IRITQSSDLARPIAIVPFEWQGEQALPTDVSSVVRTDLERSGQFKALAEEDMLAKPSAGS 93

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
            I  +Q+W +L    L+ G++   G+ R  V+ +L+DV   +Q++G  + ++  + R+ A
Sbjct: 94  RI-NWQNWRTLEMPHLLVGKIRSTGEGRYAVDVQLFDVNRGRQLLGYSYPATAKTLRRTA 152

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRDQIL 214
           H ++D++Y+ ITG +G F++RI FVS    S   +  SL V D DG   R +  S   IL
Sbjct: 153 HKVADEVYEEITGVRGAFSTRIAFVSVETRSAKDRTFSLQVADADGHAPRTVVRSSQPIL 212

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+   +AY ++ +     V+ ++ R  +  +++  F  +  AP FS +G +  +
Sbjct: 213 -SPTWSPDGMHLAYVSFRNRQA-EVFAVNLRTGKE-QKLSGFDGINGAPAFSPDGNQLAM 269

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ +    DIY +D+++   +++T    I    S+S D   + + S R G  Q+Y + + 
Sbjct: 270 ALSRSGNPDIYVLDMKTRQLKQITRGYSIETEPSWSSDGDTLYYTSGRTGSPQIYAVSAR 329

Query: 335 GSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           G   KR+S   E  Y      SP G  +A        + I V        R+L +    +
Sbjct: 330 GGTPKRVS--FEGGYNASAAASPDGRNLAMVHSQRGSYRIAVKDLKSDLFRVLTDGPQDE 387

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
           +P+++P+G+ L+++ +K G     L ++ L+GR  + L+ T     +P W  F
Sbjct: 388 SPSFAPNGQMLLYATQKGGK--GVLAAVSLDGRVKQELLLTEGDIREPAWSPF 438


>gi|299067719|emb|CBJ38928.1| protein tolB, component of the tol-pal system [Ralstonia
           solanacearum CMR15]
          Length = 435

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 210/451 (46%), Gaps = 24/451 (5%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M +R F    L     + LL+VL  G     +  +V++A   ++  P++IA   F    +
Sbjct: 3   MMMRNFWKSGLRRSAWIGLLMVLCAGVARAQL--YVEIAGAGSSQYPIAIA--NFQGESQ 58

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS-IPRFQDWNSLGAQVLVTGRVIKE 119
           +   ++ +V  DL  S  F+ +           PDS  P    W S GA   V G V + 
Sbjct: 59  IPQDITAIVRADLVHSGRFSNVD----VAGAVVPDSPAPDLGAWKSRGAAAFVGGTVTRN 114

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           G DR  + FRL+D    + + G          R  AH I+D IYQ + G++G F +R+ +
Sbjct: 115 G-DRYEIRFRLYDTAKGESLGGLALTRGEGQLRLAAHEIADYIYQKLIGDRGVFATRLSY 173

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           VS+       +  L + D DGAN +    S + I+  P +SP+  KVAY +++    + V
Sbjct: 174 VSKVGR----RYQLQISDSDGANPQVALTSNEPII-SPSWSPDGTKVAYVSFESRKPV-V 227

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y+ D    R    I N +    AP +S +G+R  +++ +D    IY V+   +   RLT 
Sbjct: 228 YVHDLITGRRAV-ISNQKGNNSAPAWSPDGRRVAVALSRDGNTQIYQVNADGSGLRRLTR 286

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSP 356
           +  I+   S+SPD   I F SDR G  Q+Y M   G D    +R++  K      P  SP
Sbjct: 287 SSAIDTEPSFSPDGRSIYFTSDRGGAPQIYRMPVEGEDAGSAQRVTF-KGGYNTSPRVSP 345

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G L+A+    G  F + V          L + S  ++P+++ +G+ ++++ +  G   S
Sbjct: 346 DGKLLAYISRVGGAFKLYVQDLSNGDVTGLTDTSYDESPSFAANGKFILYATRVGGR--S 403

Query: 417 KLYSIDLNGRNETLINTPA-YASDPQWVGFM 446
            L ++  +GR   +++  A    +P W  FM
Sbjct: 404 VLAAVSTDGRTRQILSLQAGTVREPAWGPFM 434


>gi|28198796|ref|NP_779110.1| translocation protein TolB [Xylella fastidiosa Temecula1]
 gi|32699695|sp|Q87CZ5|TOLB_XYLFT RecName: Full=Protein tolB; Flags: Precursor
 gi|28056887|gb|AAO28759.1| TolB protein precursor [Xylella fastidiosa Temecula1]
 gi|307579949|gb|ADN63918.1| translocation protein TolB [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 439

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 214/438 (48%), Gaps = 28/438 (6%)

Query: 20  LLVLIGGFFPTSI---HAFVKVATNSANYSPVSIAFTKFVSIDELGGK---VSEVVSKDL 73
           L +L+G  FP S       + +     N +   IA       D  G     VS VV+ DL
Sbjct: 8   LAMLVGLLFPLSALTQQQGLTIDIVGGNTAATPIAVLPMPYHDSAGAPATDVSGVVAADL 67

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  F  +      ++ T+   I RF  W +L    +V GRV+   +   RVE+ L+DV
Sbjct: 68  NRSGQFRTLPLGQITERPTHGSEI-RFPTWQALKQDYIVVGRVLDARQGTYRVEYELFDV 126

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
           ++ K+++G    +  ++ R +AH ++D IY+ ITG +G F +RI +V+ S   G ++ +L
Sbjct: 127 RNGKRMLGLAMTARASAMRDVAHQMADAIYEKITGLRGAFFTRIAYVTASGSHGAMRYAL 186

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V D DG N + +  S + +L  P +S + +K+AY +++      +Y+ D     + + +
Sbjct: 187 MVADSDGYNPQTIVRSAEPLL-SPDWSSDGKKLAYVSFEKGGS-SIYIQDIATG-SRELV 243

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +FR +  AP F+ +G R  +S+ +    +IY +DL S    +LTN+  I+    +S D 
Sbjct: 244 SSFRGINAAPSFAPDGHRIALSLSRSGNPEIYVMDLVSKQLIQLTNSFGIDTEPVWSSDG 303

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRIS------QDKEASYFDPVWSPQGDLIAFTKFS 367
             I F SDR G+ Q+Y + S G    R++           SY D         I   + S
Sbjct: 304 KFIYFTSDRGGRPQIYKVASVGGAATRVTFQGNYNASASVSYDD-------KKIVVAQGS 356

Query: 368 GEKFAIGVM-KKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G  + I +M +  GS     +   +L ++P+++P+   ++++ ++ G     LY++  + 
Sbjct: 357 GNVYRIAMMDQSSGSTVWNTLSTGSLDESPSFAPNASMVLYAAREGGR--GVLYAVSADA 414

Query: 426 R-NETLINTPAYASDPQW 442
           R  + L++  +   +P W
Sbjct: 415 RVRQRLVSVDSDVREPAW 432


>gi|237746665|ref|ZP_04577145.1| TolB protein [Oxalobacter formigenes HOxBLS]
 gi|229378016|gb|EEO28107.1| TolB protein [Oxalobacter formigenes HOxBLS]
          Length = 429

 Score =  155 bits (393), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 205/419 (48%), Gaps = 25/419 (5%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
           H  ++++   A   PV+IA   F +      KV++++  DL R+ +F L+  D+    I 
Sbjct: 30  HLDIQISGVGATQIPVTIA--GFANETVAPQKVTDIIRADLARTGLFRLVGTDA----IL 83

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
              +   +  W + GA  LV G V K    ++ V +RL+D+    Q+      +     R
Sbjct: 84  PESAFIDYPKWKANGADALVVGSVEKTADGKIDVRYRLFDLGKASQLSALSMVAPAPMTR 143

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
             AH I+DDIY+ +TG KG F +RI +V    V    +  L + D DG   +    S++ 
Sbjct: 144 VTAHKIADDIYEKLTGIKGMFATRIAYV----VKAGNEYRLEIADSDGEGRQLALRSKEP 199

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           I+  P +SP+  KVAY +++ +  + VY+ +  + RA   + N++    AP +S +G + 
Sbjct: 200 II-SPSWSPDGTKVAYVSFEAKKPV-VYVQNL-VTRARTVVANYKGNNSAPSWSPDGTKL 256

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +++ K+    IY+V+    +  +LT T  IN    +S D   I F SDR G  Q+Y + 
Sbjct: 257 AVALSKNGYTQIYTVNANGGSLRQLTQTRSINTEPQFSADGKWIYFTSDRSGGPQIYKIG 316

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            NG + +R++     +   P  SP G  +A+       F + +M  +  QE  L + +  
Sbjct: 317 VNGGNAQRVTFGSNYN-ISPRVSPDGKSLAYISRRNGGFQLYLMDLENGQEMRLSDTARD 375

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSK----LYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           ++P++SP+G+ ++++      TGS     L  + ++GR  + L    A   +P W  FM
Sbjct: 376 ESPSFSPNGQFIMYA------TGSGRRGVLSVVSVDGRVRQRLTMKAADVREPSWGPFM 428


>gi|94268877|ref|ZP_01291310.1| WD40-like Beta Propeller [delta proteobacterium MLMS-1]
 gi|93451428|gb|EAT02274.1| WD40-like Beta Propeller [delta proteobacterium MLMS-1]
          Length = 437

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 197/385 (51%), Gaps = 23/385 (5%)

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G ++++++S+ L+      +I    + ++        +  +W+  GA+ +V GR  +   
Sbjct: 66  GRRMADIMSRALEFHGFIEMIEPQLYGER--------QEANWSRHGAEFVVLGRY-RHSA 116

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
           D L +E RL D+   + I G+++ +     R++    +D++ + +TGEKG   SRI FVS
Sbjct: 117 DGLNLELRLLDIDAGRMIHGRRYQAPREQLRQLLLRFTDEVVEVLTGEKGVSQSRIAFVS 176

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++  SG     + + D  G +IR +T  +D +   PRF+P+ + +AY +Y   +   +Y 
Sbjct: 177 DA--SG--DKEIYLADILGDDIRRVTYHQD-LAVAPRFTPDGRGLAYTSYHRGNA-NLYQ 230

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D R  +  + I  +  + + P +   G + ++++ +D+  D+Y  D Q     RLT+  
Sbjct: 231 TDIRELKTTRAISRWVGLNITPSWPPAGDQMVLTLSRDDNPDLYLTDTQGQIIRRLTHGE 290

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDL 360
            +N+S S++PD  ++ F SDR G  Q+Y+M       +R++ Q  + +   P WSP G  
Sbjct: 291 GVNVSPSFAPDGRRLAFVSDRSGTPQIYIMDLRTMAVQRLTFQGNDNT--TPSWSPDGRW 348

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           IA+T        I +++ +G     +     + + P+WSP  R L+FSR +      +L 
Sbjct: 349 IAYTGRHEGVLHIFIIRPEGGPPIQVTRSWGHHETPSWSPDSRQLVFSRLR--HEHEQLC 406

Query: 420 SIDLNGRNETLI--NTPAYASDPQW 442
           +I LNGRN  ++  + P   S PQW
Sbjct: 407 TILLNGRNLRVLFSDEPGNHSMPQW 431


>gi|82703827|ref|YP_413393.1| translocation protein TolB [Nitrosospira multiformis ATCC 25196]
 gi|82411892|gb|ABB76001.1| TolB-like protein [Nitrosospira multiformis ATCC 25196]
          Length = 441

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 195/405 (48%), Gaps = 25/405 (6%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGK-VSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
           +++    AN  PV+I    F   + LG + ++ V+S DLQR+ +F L+     +     P
Sbjct: 38  IEIFGGGANQIPVAI--VPFSGEEGLGAQSLTPVISADLQRTGLFKLVDPGGLRPH--EP 93

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
             +  F DW + GA  L  G  I     ++ +  RL DV  + ++       +P   R  
Sbjct: 94  VEV-SFPDWINRGASALAIGTAIPVSGGQISIRVRLLDVARQAELGSYVETVAPEQLRAA 152

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN----IRYLTPSR 210
           AH I+D IY+ +TG+ G F++RI +V    +    K SL V D DG N    I Y  P  
Sbjct: 153 AHRIADMIYEKLTGDVGVFSTRIAYV----IKQGKKYSLQVADADGFNAQPVIEYTEP-- 206

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
              +  P +SP+  ++AY +++++    V  + T   R  K + NFR    AP +S +G+
Sbjct: 207 ---IISPAWSPDGTRLAYVSFENKK--PVVYVQTLATRTRKAVANFRGSNSAPAWSPDGR 261

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +  + +       I+ ++      +RLT +  I+   S+SPD   I+F SDR G  Q+Y 
Sbjct: 262 KLAVVLSVMGGSQIFLINSDGGGLQRLTQSSGIDTEPSFSPDGRYIIFTSDRGGSPQIYR 321

Query: 331 MQSNGSDQKRISQDK-EASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           M   G   K   +   E SY   P +SP G    F   SG++F + +      Q RLL +
Sbjct: 322 MPVTGGVSKVAERLTFEGSYNVSPRYSPDGKGFTFIHRSGDRFNVAIQDFATGQVRLLTD 381

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
               ++P+++P+GR ++++ +  G     L ++  +GR    ++T
Sbjct: 382 SRFDESPSFAPNGRMVLYATEIRGR--GILSAVSSDGRTRQQLST 424


>gi|118574588|sp|Q2Y5H0|TOLB_NITMU RecName: Full=Protein tolB; Flags: Precursor
          Length = 437

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/405 (28%), Positives = 195/405 (48%), Gaps = 25/405 (6%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGK-VSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
           +++    AN  PV+I    F   + LG + ++ V+S DLQR+ +F L+     +     P
Sbjct: 34  IEIFGGGANQIPVAI--VPFSGEEGLGAQSLTPVISADLQRTGLFKLVDPGGLRPH--EP 89

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
             +  F DW + GA  L  G  I     ++ +  RL DV  + ++       +P   R  
Sbjct: 90  VEV-SFPDWINRGASALAIGTAIPVSGGQISIRVRLLDVARQAELGSYVETVAPEQLRAA 148

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN----IRYLTPSR 210
           AH I+D IY+ +TG+ G F++RI +V    +    K SL V D DG N    I Y  P  
Sbjct: 149 AHRIADMIYEKLTGDVGVFSTRIAYV----IKQGKKYSLQVADADGFNAQPVIEYTEP-- 202

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
              +  P +SP+  ++AY +++++    V  + T   R  K + NFR    AP +S +G+
Sbjct: 203 ---IISPAWSPDGTRLAYVSFENKK--PVVYVQTLATRTRKAVANFRGSNSAPAWSPDGR 257

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +  + +       I+ ++      +RLT +  I+   S+SPD   I+F SDR G  Q+Y 
Sbjct: 258 KLAVVLSVMGGSQIFLINSDGGGLQRLTQSSGIDTEPSFSPDGRYIIFTSDRGGSPQIYR 317

Query: 331 MQSNGSDQKRISQDK-EASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           M   G   K   +   E SY   P +SP G    F   SG++F + +      Q RLL +
Sbjct: 318 MPVTGGVSKVAERLTFEGSYNVSPRYSPDGKGFTFIHRSGDRFNVAIQDFATGQVRLLTD 377

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
               ++P+++P+GR ++++ +  G     L ++  +GR    ++T
Sbjct: 378 SRFDESPSFAPNGRMVLYATEIRGR--GILSAVSSDGRTRQQLST 420


>gi|325981318|ref|YP_004293720.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Nitrosomonas sp. AL212]
 gi|325530837|gb|ADZ25558.1| Tol-Pal system beta propeller repeat protein TolB [Nitrosomonas sp.
           AL212]
          Length = 432

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 211/439 (48%), Gaps = 24/439 (5%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
           K+   LL  L+     +S+HA + +       S + I    F     L   ++ V++ DL
Sbjct: 7   KLTHGLLFWLLW-LVSSSLHAQLNIEIFGGGASRIPITIVPFAEESRLQQNITPVINADL 65

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
           QR+ +F LI  D       +P  +  + DW + G   LV GRV     D++ ++FR+ D+
Sbjct: 66  QRTGLFRLI--DPAGSSPHSPAEV-AYADWANRGVNALVIGRVTHLSGDQVEIQFRVMDI 122

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
             + Q+ G          R  AH I+D IY+++TG+ G F++RI +V +       K +L
Sbjct: 123 AKKSQLTGLAITVPTTQLRAAAHRIADVIYEALTGDVGVFSTRIAYVLKRGN----KYAL 178

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVYLMDTRIDRAPKR 252
            V D DG N + +    + I+  P +SP+  ++AY +++++  ++ V  + TR  RA   
Sbjct: 179 QVADADGYNAQSIIEYTEPII-SPAWSPDGNQLAYVSFENKKPVVYVQTLSTRERRA--- 234

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + NF+    AP +S +GK+  + +       I+ V+   +  +RL+ +  I+   S+SPD
Sbjct: 235 VANFKGSNSAPAWSPDGKKLAVVLTGQGGSQIFLVNTDGSGLQRLSRSSGIDTEPSFSPD 294

Query: 313 SSQIVFESDREGKEQLY---VMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
              ++F SDR G  Q+Y   V  +  S+ +R++   E SY   P +S       F   + 
Sbjct: 295 GRYLLFTSDRGGSPQIYRMPVTAAESSNAERLT--FEGSYNVSPDYSHDNKSFTFIHRNN 352

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +F + V +    Q  +L      ++P+++P+G+ ++++ + +G       S D   R +
Sbjct: 353 NQFNVAVQEIGSRQIEILTNSKFDESPSFAPNGKMILYATEINGHGILSAVSRDGQTRQQ 412

Query: 429 TLINT-----PAYASDPQW 442
             +       PA+   P+W
Sbjct: 413 LSVQAGDIREPAWGPLPKW 431


>gi|300692237|ref|YP_003753232.1| protein tolB, component of the tol-pal system [Ralstonia
           solanacearum PSI07]
 gi|299079297|emb|CBJ51969.2| protein tolB, component of the tol-pal system [Ralstonia
           solanacearum PSI07]
          Length = 433

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 209/450 (46%), Gaps = 22/450 (4%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M +R F    L     + LL+VL  G     +  +V++A   ++  P++IA   F    +
Sbjct: 1   MMMRNFWKSGLRRSAWIGLLMVLCAGVARAQL--YVEIAGAGSSQYPIAIA--NFQGESQ 56

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS-IPRFQDWNSLGAQVLVTGRVIKE 119
           +   ++ ++  DL  S  F+ +           PDS  P    W S GA   V G V + 
Sbjct: 57  ISQNMTAIIRSDLVHSGRFSNVD----VAGAVVPDSPAPDLGAWKSRGAAAFVGGTVTRN 112

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           G DR  + FRL+D    + + G          R  AH I+D IYQ + G++G F +R+ +
Sbjct: 113 G-DRYEIRFRLYDTAKGESLGGLALTRGEGQLRLAAHEIADYIYQKLIGDRGVFATRLSY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           VS+       +  L + D DGAN +    S + I+  P +SP+  KVAY +++    + V
Sbjct: 172 VSKVGR----RYQLQISDSDGANPQIALTSNEPII-SPSWSPDGTKVAYVSFESRKPV-V 225

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y+ D    R    I N +    AP +S +G+R  +++ +D    IY V+   +   RLT 
Sbjct: 226 YVHDLVAGRR-TVISNQKGNNSAPAWSPDGRRVAVALSRDGNTQIYLVNADGSGLRRLTR 284

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASY-FDPVWSPQ 357
           +  I+   S+SPD   I F SDR G  Q+Y M   G D     +   + SY   P  SP 
Sbjct: 285 SSAIDTEPSFSPDGRSIYFTSDRGGAPQIYRMPVEGEDAGSAQRVTFKGSYNTSPRMSPD 344

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G L+A+    G  F + V          L + +  ++P+++ +G+ ++++ +  G   S 
Sbjct: 345 GKLLAYISRVGGAFKLYVQDLSNGDVTGLTDTAYDESPSFAANGKFILYATRVGGR--SV 402

Query: 418 LYSIDLNGRNETLINTPA-YASDPQWVGFM 446
           L ++  +GR   +++  A    +P W  FM
Sbjct: 403 LAAVSTDGRTRQILSLQAGEVREPAWGPFM 432


>gi|126668393|ref|ZP_01739350.1| translocation protein TolB precursor [Marinobacter sp. ELB17]
 gi|126627102|gb|EAZ97742.1| translocation protein TolB precursor [Marinobacter sp. ELB17]
          Length = 449

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/424 (25%), Positives = 206/424 (48%), Gaps = 10/424 (2%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIA-FTKFVSIDELGGKVSEVVSKDLQRSDV 78
           L  L+    P      +++     +  P+++  F +  +I   G  ++++V  DL  S  
Sbjct: 30  LFFLLATSLPLRAELLIRITEGVDSALPIAVVPFAESGAIPP-GDTLADIVQSDLTMSSE 88

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F  +  +      +    +  F+DW  LG + ++ G++ ++G DRL   + L+DV   ++
Sbjct: 89  FRTLPAEKMLSLPSQRSEV-HFRDWRLLGQRYVLVGQLTRQG-DRLEARYELFDVNREER 146

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           I+G+   +   + R +AH +SD +Y++ITGE+G F++++ +++   V   ++  L V D 
Sbjct: 147 ILGESAGAPLGNLRTLAHYVSDRVYEAITGERGAFSTQLAYITRENVGDKVRYRLQVSDI 206

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG   R    S + IL  P +S +  ++AY +++      +Y+ +    +  K I +FR 
Sbjct: 207 DGKRSRVRLESAEPIL-SPAWSRDGSRLAYVSFETGKPA-IYVHELASGKRTK-IADFRG 263

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +  AP +S +GK  L+++ KD   DIY +DL S    +LT+   I   A+YS    +I F
Sbjct: 264 LNSAPAWSPDGKSLLMTLSKDGNADIYRMDLASRDLTKLTDHWAIETEATYSAGGDEIFF 323

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SDR G  Q+Y  +  G  ++     +  +   P    +G+ + +       F I     
Sbjct: 324 TSDRSGGPQIYRQKGKGEPRRMTFGSRYNARPRP--DHKGEFVYYVHQRSSGFHIARTNL 381

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
              +E +L    + ++P+ SP+GR LI++ ++ G +   + S D  G   +L  T     
Sbjct: 382 KSGEETVLTRTESDESPSVSPNGRMLIYATRQGGASVLTVISAD-GGAAYSLPATEGDVR 440

Query: 439 DPQW 442
           +P W
Sbjct: 441 EPAW 444


>gi|326316638|ref|YP_004234310.1| Tol-Pal system beta propeller repeat protein TolB [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323373474|gb|ADX45743.1| Tol-Pal system beta propeller repeat protein TolB [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 439

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 190/383 (49%), Gaps = 14/383 (3%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           K+S ++  DL+RS  F ++  D    ++ + +S P    W   GA  L TG V +    R
Sbjct: 67  KISAIIQADLERSGQFRVV--DGSGPQL-DENSRPDAALWKEKGADSLTTGSVTRLPDGR 123

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
             V FRLW+    + + G+ F  +    R +AH I+D +Y+ +TG++G F++RI +V+++
Sbjct: 124 YDVRFRLWNTVRGEDLGGQSFVVTQGDLRLVAHRIADYVYEKLTGQRGIFSTRIAYVTKA 183

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                 + SL V D DG N +    S + I+  P +SP+  ++AY +++    + VY+ D
Sbjct: 184 GS----RYSLWVADSDGENAQSALSSPEPII-SPAWSPSGTQLAYVSFESRKPV-VYVHD 237

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R  + I NFR    AP +S +G+   +++ +D +  +Y++D       RL  +  I
Sbjct: 238 VSTGRR-RLIANFRGSNSAPAWSPDGRTLAVTLSRDGSSQLYTIDANGGEPRRLMQSSGI 296

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +   +YS D   I F SDR G  Q+Y + + G   +R++    A    P  SP G  +A+
Sbjct: 297 DTEPTYSSDGRSIYFVSDRGGAPQIYRVPATGGSAERVTFTG-AYNISPSISPDGKWLAY 355

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G  F + VM         + + +  ++P+++P+G+ ++++ ++ G     L +  L
Sbjct: 356 ISRVGGAFKLHVMDLTSGSVTAITDTTADESPSFAPNGKLIVYATQQQGR--EALMTTTL 413

Query: 424 NGR-NETLINTPAYASDPQWVGF 445
           +G+    L        +P W  F
Sbjct: 414 DGKIKARLAGQSGDIREPDWGPF 436


>gi|221068062|ref|ZP_03544167.1| Tol-Pal system beta propeller repeat protein TolB [Comamonas
           testosteroni KF-1]
 gi|220713085|gb|EED68453.1| Tol-Pal system beta propeller repeat protein TolB [Comamonas
           testosteroni KF-1]
          Length = 417

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 193/412 (46%), Gaps = 18/412 (4%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
           +V       + + IA   F        K+S ++  DL+RS  F  +         T   S
Sbjct: 18  RVEVTGVGLTQLPIAIAPFKGEGSAPQKISAIIQADLERSGQFRGVDASGVALDET---S 74

Query: 97  IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            P    W   GA  L TG + +    R  V FRLWDV   + + G+ F  +    R +AH
Sbjct: 75  RPDVAQWRQKGADSLATGSITRLADGRWDVRFRLWDVVKGQDLGGQGFAVTTGDLRLVAH 134

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            I+D IY+ +TGEKG F++RI +V+++      +  L + D DG N +    S + I+  
Sbjct: 135 RIADYIYEKLTGEKGIFSTRIAYVTKAGA----QYRLWIADADGENAQSALSSPEPII-S 189

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALIS 275
           P ++PN  ++AY +++    + VY+ D  +    +R + NFR    AP +S +G R  ++
Sbjct: 190 PAWAPNGTQLAYVSFESRKPV-VYVHD--VASGHRRLLANFRGSNSAPAWSPDGSRLAVT 246

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + +D    +Y +  Q     RL  +  I+    +S D   I F SDR G  Q+Y + S+G
Sbjct: 247 LSRDGGSQLYLLSAQGGEPRRLMQSSGIDTEPCFSSDGRTIYFVSDRGGAPQVYKVSSSG 306

Query: 336 SDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              +R++     +Y   P  SP G  +A+    G  F + VM         + + +  ++
Sbjct: 307 GSAERVT--FSGTYNISPAISPDGKWLAYVSRVGGGFKLQVMDLATGTVNSVTDTTADES 364

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVGF 445
           P+++P+ R ++++  + G     L +  L+G+ +  +  P+    +P W  F
Sbjct: 365 PSFAPNSRLIVYATIQGGR--EALMTTTLDGKIKARLAGPSGDIREPDWGPF 414


>gi|118594344|ref|ZP_01551691.1| translocation protein TolB precursor [Methylophilales bacterium
           HTCC2181]
 gi|118440122|gb|EAV46749.1| translocation protein TolB precursor [Methylophilales bacterium
           HTCC2181]
          Length = 432

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 189/375 (50%), Gaps = 11/375 (2%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV--IKEGKD 122
           + EV++ DL RS +F+ I          +   +  F +W +L +Q +V G++  I     
Sbjct: 56  MHEVITNDLNRSGLFSSIDISGVSDYPIDEREV-NFSNWAALQSQFIVVGKIDAIGRSNS 114

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           +++V + L D+   K ++       P+ +R IAH I+D IY+ +TG KG F++ I FV +
Sbjct: 115 QMQVTWSLIDIYKEKTVLSVAIKGQPSQYRVIAHRIADTIYEKLTGSKGVFDTNIAFVKK 174

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G  K SL + D DG N R +  SR  I+  PR+SPN +K+AY +++ +  + +Y+ 
Sbjct: 175 L---GKEKYSLFIADYDGHNPRAIVNSRYSII-SPRWSPNGKKIAYVSFEKKKPV-IYVQ 229

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    +    + NFR    AP +S + K+  I +       IY++D      ++L  T  
Sbjct: 230 DIETGKR-TLLANFRGNNSAPAWSPDSKKLAIVLTYSANSQIYTIDADGKNIKQLMRTRS 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           IN   ++SP+  +I F SDR G  Q+Y +  + ++  R++ +   +   P  SP G L+ 
Sbjct: 289 INTEPAWSPNGKEIYFSSDRAGSAQIYKVDVDTNEVVRVTFEGNNN-VSPSLSPDGKLLL 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           F       + + +     +Q   L    + ++P +SP+G  ++F+ K  G   +K+ ++ 
Sbjct: 348 FLNQDNGSYRVAIQNLLSNQMLKLTNGPDDESPIFSPNGHMVLFTYKDYGKV-TKIGTVS 406

Query: 423 LNGRNETLINTPAYA 437
           +NG   T I+  + A
Sbjct: 407 INGLKMTPIDVGSEA 421


>gi|120612059|ref|YP_971737.1| translocation protein TolB [Acidovorax citrulli AAC00-1]
 gi|120590523|gb|ABM33963.1| TolB, N-terminal domain protein [Acidovorax citrulli AAC00-1]
          Length = 438

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 186/364 (51%), Gaps = 15/364 (4%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           K+S +V  DL+RS  F  +  D+   ++ + +S P    W   GA  L TG + +    R
Sbjct: 66  KISAIVQADLERSGQFRAV--DASGPQL-DENSRPDVALWKQKGADSLTTGSITRLPDGR 122

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
             V FRLW+    +   G+ F  + A  R +AH I+D +Y+ +TG++G F++RI +V+++
Sbjct: 123 YDVRFRLWETVRGEDKGGQSFVVTQADLRLVAHRIADYVYEKLTGQRGIFSTRIAYVTKA 182

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                 + SL V D DG N +    S + I+  P +SP+  ++AY +++    + VY+ D
Sbjct: 183 GS----RYSLWVADADGENAQSALSSPEPII-SPAWSPSGTQLAYVSFESRKPV-VYVHD 236

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R  + I NFR    AP +S +G+   +++ +D +  +Y++D       RL  +  I
Sbjct: 237 VSTGRR-RLIANFRGSNSAPAWSPDGRTLAVTLSRDGSSQLYTIDANGGEPRRLMQSSGI 295

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIA 362
           +   +YS D   I F SDR G  Q+Y + + G   +R++     +Y   P  SP G  +A
Sbjct: 296 DTEPTYSSDGRSIYFVSDRGGAPQIYRVPATGGSAERVT--FTGTYNISPSISPDGKWLA 353

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +    G  F + VM         + + +  ++P+++P+GR ++++ ++ G     L +  
Sbjct: 354 YISRVGGAFKLHVMDLTSGSVTAITDTTADESPSFAPNGRLIVYATQQQGR--EALMTTT 411

Query: 423 LNGR 426
           L+G+
Sbjct: 412 LDGK 415


>gi|262368607|ref|ZP_06061936.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           johnsonii SH046]
 gi|262316285|gb|EEY97323.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           johnsonii SH046]
          Length = 427

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 208/429 (48%), Gaps = 35/429 (8%)

Query: 11  LNMKINLCLLLVLIGGFFP---TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
           + M     L L ++  F P   T  HA + +    A      IA   F +   L      
Sbjct: 1   MEMTRKHLLSLAILTAFSPVLVTQAHAQLHLEIAKAPEEAPKIAIVPFSNDSSL----YP 56

Query: 68  VVSKDLQRSDVFNLISQD-SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           ++  DL RS  F   S++      + NP++     +W + G   +VTG V         V
Sbjct: 57  IIETDLNRSGKFTSASKNLPATASMNNPNAA----NWQAAGVPYVVTGTVKTTENGSYEV 112

Query: 127 EFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
            ++L+DV+ ++Q +  +  + PAS  R  AH ISD IYQ++TG  GDF+ RI +V  +  
Sbjct: 113 HYQLYDVQ-KQQYLLNELLTVPASRVRSAAHMISDAIYQALTGIPGDFSGRIAYVLRNPA 171

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   + +L + D DG   R +  SRD IL  P ++P+ +K+AY +++ +    +Y+ D  
Sbjct: 172 TPEQRYTLQIADTDGEQPRTILTSRDPIL-SPAWTPDAKKIAYVSFETKRPA-IYVQDLS 229

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              A +++ +FR +  AP FS +GK  L +       +IY ++L++   +R+TN   I+ 
Sbjct: 230 TG-AREKLASFRGLNGAPSFSPDGKSMLFTASMHGNPEIYQMNLETRQLQRMTNDSAIDT 288

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--- 362
            A Y+PD    +F SDR G  Q+Y      S   R++       F   ++ +G L A   
Sbjct: 289 EARYAPDGKSFIFTSDRGGSAQIYRYDLANSSYNRLT-------FRGAFNARGTLSADGK 341

Query: 363 ----FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                 + SG  + + +   + S   +L   S  ++P++SP+G+ ++++  ++G  G  L
Sbjct: 342 KLALVHRPSGSNYKVAIQDLNSSVTNILTPTSLDESPSFSPNGQMVVYA-TREGSRG--L 398

Query: 419 YSI-DLNGR 426
            SI  L+GR
Sbjct: 399 LSIMSLDGR 407


>gi|261855154|ref|YP_003262437.1| Tol-Pal system beta propeller repeat protein TolB [Halothiobacillus
           neapolitanus c2]
 gi|261835623|gb|ACX95390.1| Tol-Pal system beta propeller repeat protein TolB [Halothiobacillus
           neapolitanus c2]
          Length = 435

 Score =  153 bits (387), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 214/440 (48%), Gaps = 14/440 (3%)

Query: 11  LNMKINLCLLLVLIGGFF--PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           +  +I    L +L G  F  P    A + +  +    S V IA   F +        + +
Sbjct: 1   MKARIQRWGLWILSGLLFLAPAVSQAELNIVISGGQESGVPIAVVPFSTTTNT--DFASI 58

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +  DL RS  F  ++ D    + + P+ + +F  W +  AQ LV G+V+++G +  +  F
Sbjct: 59  IDADLARSGQFAPLTTDQMPSQPSAPEQV-QFDQWRTGKAQYLVVGKVVQQGGN-YQATF 116

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            L +V + +Q+ G+   +  ++ R IAH I+D I++ ITG +G F+++I +V+E+   G 
Sbjct: 117 YLLNVTNGQQMTGRVISAPVSAARSIAHRIADIIFKQITGVRGAFDTKIAYVTETDGPGK 176

Query: 189 IKN-SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
            +  +L V D DGAN + +  S +  L  P +SP+  K+AY +++      +++ D R  
Sbjct: 177 KRRYTLEVADSDGANPQTVL-SSNFPLMSPTWSPDGSKLAYVSFEGRRS-GIWVQDLRTG 234

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +   ++  F  +  AP +S  G +  I++ K  + +IY VDL +    ++TN   IN  A
Sbjct: 235 QR-YQLTKFPGINGAPSWSPKGNKIAITLSKYHSPNIYVVDLDTRNLTQVTNDGSINTEA 293

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + PD+  +VF SDR G  QL+      S  +R++     +    + SP G  +A     
Sbjct: 294 CWLPDNQTLVFTSDRSGSPQLFEKTVGTSSAQRLTFGLSYAAGGAI-SPDGKTLALLAGG 352

Query: 368 GEKFAIGV--MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              F + V  +   GS  R +    + + P+++P+G  LI++ +  G +  K+  +   G
Sbjct: 353 NGGFRVAVQSLSGGGSDLRYISNGGSEERPSFAPNGSMLIYASQVGGSSVLKVSPVS-GG 411

Query: 426 RNETLINTPAYASDPQWVGF 445
            ++TL        DP W  F
Sbjct: 412 ESQTLRFARGKVRDPAWGPF 431


>gi|121594093|ref|YP_985989.1| translocation protein TolB [Acidovorax sp. JS42]
 gi|120606173|gb|ABM41913.1| TolB, N-terminal domain protein [Acidovorax sp. JS42]
          Length = 443

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 196/421 (46%), Gaps = 16/421 (3%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
           P S  A  +V       + + IA   F    +   K+S +V  DL+RS  F  +      
Sbjct: 36  PLSALAQFRVEITGVGLTQLPIAIAPFRGEPQSPQKISAIVQADLERSGRFLGVDASGVA 95

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
               +  S P    W    A  L +G + +    R  V FRLWDV   + + G+ F  + 
Sbjct: 96  ---LDESSRPDLSLWRQRKADALTSGSITRLADGRFDVRFRLWDVVKAQDLGGQSFVVTQ 152

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           A  R +AH I+D +Y+ +TGE+G F++RI +V+++      + SL V D DG N +    
Sbjct: 153 ADLRLVAHRIADFVYEKLTGERGIFSTRIAYVTKAGS----RYSLWVADADGENAQSALS 208

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           S + I+  P ++P   ++AY +++    + VY+ D    R  + I NFR    AP +S +
Sbjct: 209 SPEPII-SPAWAPTGTQLAYVSFESRKPV-VYVHDVATGRR-RLIANFRGSNSAPAWSPD 265

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+   +++ +D    +Y++D       RL  +  I+    +S D   I F SDR G  Q+
Sbjct: 266 GRTLAVTLSRDGGSQLYTIDANGGEPRRLMQSSGIDTEPVFSSDGRSIYFVSDRGGSPQV 325

Query: 329 YVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           Y + ++G   +R++ +   SY   P  SP G  +A+    G  + + VM         + 
Sbjct: 326 YRVAASGGGAERVTFN--GSYNISPSISPDGQWLAYISRVGGAYKLHVMDLKSGSVTAVT 383

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           + S  + P+++P+ R ++++ ++ G     L +  L+G+    L        +P W  F 
Sbjct: 384 DTSADENPSFAPNSRLIVYATQQQGR--EALMTTTLDGKIKARLAGQGGDIREPDWGPFQ 441

Query: 447 D 447
           +
Sbjct: 442 N 442


>gi|332528330|ref|ZP_08404330.1| translocation protein TolB [Hylemonella gracilis ATCC 19624]
 gi|332042201|gb|EGI78527.1| translocation protein TolB [Hylemonella gracilis ATCC 19624]
          Length = 433

 Score =  153 bits (386), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 200/390 (51%), Gaps = 20/390 (5%)

Query: 27  FFPTSIHAFVKVATNSANYSPVSIA-FTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           F P      V+VA       P S+A F    +I +   K+S +V  DL+RS  F  +  +
Sbjct: 3   FAPAHAQFRVEVAGVGLTQVPFSVAPFRGEAAIQQ---KISAIVLADLERSGQFRSVVLN 59

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF 145
             K    +  + P    W   G+  LV G V +    R  V FRLWDV   K + G+ F 
Sbjct: 60  --KADALDETARPDLAAWRQAGSDALVAGSVTRMADGRFDVRFRLWDVVAGKDLGGQSFL 117

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
            S A  R  AH ++D +Y+ +TG+KG F++RI +V+++      ++SL V D DG   + 
Sbjct: 118 VSAADLRLSAHRVADYVYEQLTGDKGVFSTRIAYVTKTDQ----RHSLWVADADGEAAQP 173

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
              S + I+  P +SP+ +++AY +++    + VY+ +    R  + + +FR    AP +
Sbjct: 174 ALSSPEPII-SPTWSPDGRQLAYVSFESRRPV-VYIHEVSTGRR-RLVASFRGSNSAPAW 230

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDRE 323
           S +G+   +++ +D    +Y++DL + A E  RLT +  I+   +YS D   I F SDR 
Sbjct: 231 SPDGRFLAVTLSRDGGSQLYTLDLNNLAAEPLRLTRSNGIDTEPTYSADGRFIYFVSDRG 290

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGS 381
           G  Q+Y + + G + +R++     +Y   P  S  G  +A+ ++ +GE F + VM+    
Sbjct: 291 GSPQIYRLPAKGGNPERVT--FTGTYNISPALSADGRWLAYISRINGE-FKLHVMELASG 347

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +L    + + P+++P+ R L+++ K++
Sbjct: 348 AVTMLTNTVSDENPSFAPNSRLLLYATKQN 377



 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 84/174 (48%), Gaps = 16/174 (9%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           + + DL+ +A  R+ + ++  ++      S++I + +  + +  L+V  ++G   +    
Sbjct: 118 VSAADLRLSA-HRVADYVYEQLTGDKGVFSTRIAYVTKTDQRHSLWVADADGEAAQPALS 176

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSG 401
             E     P WSP G  +A+  F   +  + + +    + RL+     SN  AP WSP G
Sbjct: 177 SPE-PIISPTWSPDGRQLAYVSFESRRPVVYIHEVSTGRRRLVASFRGSN-SAPAWSPDG 234

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNG---------RNETLINTPAYASDPQWVGFM 446
           R L  +  +DG  GS+LY++DLN          R+  +   P Y++D +++ F+
Sbjct: 235 RFLAVTLSRDG--GSQLYTLDLNNLAAEPLRLTRSNGIDTEPTYSADGRFIYFV 286


>gi|33603212|ref|NP_890772.1| translocation protein TolB [Bordetella bronchiseptica RB50]
 gi|67462004|sp|Q7WFN4|TOLB_BORBR RecName: Full=Protein tolB; Flags: Precursor
 gi|33568843|emb|CAE34601.1| putative TolB-like translocation protein [Bordetella bronchiseptica
           RB50]
          Length = 441

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 201/420 (47%), Gaps = 19/420 (4%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
           P      V ++   A   PV+IA   F   D  G  ++EV+  DL R+  F LI+     
Sbjct: 36  PAQAQLRVDISGTGATQYPVAIA--DFAVDDTHGRALAEVIRADLTRTGQFRLINA---A 90

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
               N DS     DW + GA  L  G + +    R  V +RL D   + Q+ G  F  + 
Sbjct: 91  GSGLNVDSQVAHDDWRAKGADFLAYGSITRGPDGRYDVRYRLADTVKKGQLDGVAFSGTE 150

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R++AH I+D IY+ ITG +G F++RI +V +   +      L V D DG N +    
Sbjct: 151 QELRRVAHQIADRIYEKITGVRGVFSTRIAYVLKRGST----YELQVADADGQNPQVALR 206

Query: 209 SRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           SR+ I+  P +SP+  ++AY +++  + ++ V+ + T   R P  + NF+    AP +S 
Sbjct: 207 SREPII-SPSWSPDGSRLAYVSFESGKPVVYVHTLATSA-RIP--VANFKGNNSAPAWSP 262

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +G +  +++ +D    IY V     +   R+T +  I+   +++PD   I+F SDR G  
Sbjct: 263 DGSQLAVALTRDGLSQIYIVSAGGGSNMRRITRSPGIDTEPNFTPDGRSIIFTSDRSGGP 322

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Q+Y    +G D +R++ +   +   P  SP G  + +       F I  +      E LL
Sbjct: 323 QIYQTGLDGGDARRLTFNGGYN-ISPRISPDGSTLLYVARRDGAFRIASLNLSSGSETLL 381

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
            +  + Q+P+++P+G  ++++  ++G   S L  +  +GR  +TL        +P W  F
Sbjct: 382 TDGRDDQSPSFAPNGMQVLYAAIQNGR--SVLAGVSSDGRVRQTLSVLNGEIREPTWGPF 439


>gi|33594232|ref|NP_881876.1| translocation protein TolB [Bordetella pertussis Tohama I]
 gi|67462002|sp|Q7VU03|TOLB_BORPE RecName: Full=Protein tolB; Flags: Precursor
 gi|33564307|emb|CAE43608.1| putative TolB-like translocation protein [Bordetella pertussis
           Tohama I]
 gi|332383646|gb|AEE68493.1| translocation protein TolB [Bordetella pertussis CS]
          Length = 438

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 201/420 (47%), Gaps = 19/420 (4%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
           P      V ++   A   PV+IA   F   D  G  ++EV+  DL R+  F LI+     
Sbjct: 33  PAQAQLRVDISGTGATQYPVAIA--DFAVDDTHGRALAEVIRADLTRTGQFRLINAAGSG 90

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
               N DS     DW + GA  L  G + +    R  V +RL D   + Q+ G  F  + 
Sbjct: 91  ---LNVDSQVAHDDWRAKGADFLAYGSITRGPDGRYDVRYRLADTVKKGQLDGVAFSGTE 147

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R++AH I+D IY+ ITG +G F++RI +V +   +      L V D DG N +    
Sbjct: 148 QELRRVAHQIADRIYEKITGVRGVFSTRIAYVLKRGST----YELQVADADGQNPQVALR 203

Query: 209 SRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           SR+ I+  P +SP+  ++AY +++  + ++ V+ + T   R P  + NF+    AP +S 
Sbjct: 204 SREPII-SPSWSPDGSRLAYVSFESGKPVVYVHTLATSA-RIP--VANFKGNNSAPAWSP 259

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +G +  +++ +D    IY V     +   R+T +  I+   +++PD   I+F SDR G  
Sbjct: 260 DGSQLAVALTRDGLSQIYIVSAGGGSNMRRITRSPGIDTEPNFTPDGRSIIFTSDRSGGP 319

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Q+Y    +G D +R++ +   +   P  SP G  + +       F I  +      E LL
Sbjct: 320 QIYQTGLDGGDARRLTFNGGYN-ISPRISPDGSTLLYVARRDGAFRIASLNLSSGSETLL 378

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
            +  + Q+P+++P+G  ++++  ++G   S L  +  +GR  +TL        +P W  F
Sbjct: 379 TDGRDDQSPSFAPNGMQVLYAAIQNGR--SVLAGVSSDGRVRQTLSVLNGEIREPTWGPF 436


>gi|311694926|gb|ADP97799.1| translocation protein TolB precursor [marine bacterium HP15]
          Length = 437

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 206/402 (51%), Gaps = 15/402 (3%)

Query: 46  SPVSIAFTKFVSIDEL--GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW 103
           S + +A   F    ++  G KVS +V  DL  +  F  +  +      +  + +  F+DW
Sbjct: 41  SAIPVAVVPFAESGQMPAGDKVSSIVQADLTMTGEFRTLPPEKMLSLPSRREEV-YFRDW 99

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
             LG + ++ G + + G DR++  + L+DV   ++I+G+   +  ++ R +AH ISD +Y
Sbjct: 100 RLLGQRYVLVGALSRSG-DRVQARYELFDVNREERILGETAAAPASNMRSLAHHISDKVY 158

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           ++ITG  G F++++ +++    +G  +  L V D DG   R    S++ IL  P +SP+ 
Sbjct: 159 EAITGVPGAFSTKLAYITLDTANGKPRYRLQVSDVDGKRARIRLESQEPIL-SPAWSPDG 217

Query: 224 QKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           +K+AY +++  + ++ V+ + T  +R   ++ +F  +  AP +S +G+  L+++ KD   
Sbjct: 218 EKLAYVSFETGKPVIFVHELATG-NRT--KVADFPGLNSAPAWSDDGRSLLMTLSKDGNA 274

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +IY ++L +    +LTN   I+   SY      I F SDR G  Q+Y M + G++ +RI+
Sbjct: 275 EIYRMNLDTRQLTKLTNHWAIDTEPSYDATGKGIFFTSDRSGGPQIYHMDTPGAEPRRIT 334

Query: 343 QDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                S ++    P   G+ + +       F I   +    +E +L    + ++P+ +P+
Sbjct: 335 F---GSRYNARPRPDNDGNYVYYVHQRDRAFHIARTELKTGEETILTRTESDESPSVAPN 391

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           GR LI++ +++G     + S D  G   +L  +     +P W
Sbjct: 392 GRMLIYATRQNGSNVLTVISAD-GGAAYSLPASEGDVREPAW 432


>gi|325274582|ref|ZP_08140639.1| translocation protein TolB [Pseudomonas sp. TJI-51]
 gi|324100284|gb|EGB98073.1| translocation protein TolB [Pseudomonas sp. TJI-51]
          Length = 433

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 215/441 (48%), Gaps = 23/441 (5%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
            L +LL  + G    +    + V + S   +P+++          L   +++++  DL+ 
Sbjct: 7   GLLVLLCCVAGL-AVAEEKNILVTSGSDRATPIAVVPFGMQGGSVLPEDIADIIGNDLRN 65

Query: 76  SDVF------NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           S  +      N+ISQ S   ++        F+DW +LGAQ ++ G ++  G  RL+V++ 
Sbjct: 66  SGYYSPIPRQNMISQPSQASEVI-------FRDWKALGAQYVMVGSIVPSG-GRLQVQYA 117

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGI 188
           L++V   +Q++      S    R +AH I+D  ++ +TG KG F++R+L+V+ E   +  
Sbjct: 118 LFNVATEQQVLTGSVAGSTDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSTNN 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            + +L   D DGA    L  SR+ IL  PRF+P+ +++AY +++ +   R+++ +    R
Sbjct: 178 TRYTLQRSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFVQNIDTGR 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +++ NF  +  AP +S +G R    + KD   DIY +++ S    R+T    IN    
Sbjct: 236 R-EQVTNFEGLNGAPAWSPDGSRLAFVLSKDGNPDIYVMNMASRQISRVTAGPGINTEPF 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +  D + I F SDR GK Q+Y    +G   +R++     +    + + +  L+   +  G
Sbjct: 295 WGKDGNTIYFTSDRGGKPQIYKQSVSGGGAERVTFVGNYNANPKLSADEKTLVMIHRQQG 354

Query: 369 -EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F +          ++L E S  ++PT +P+G  LI++ ++ G     L  + LNGR 
Sbjct: 355 FTNFKVAAQDLQRGSVKILSETSLDESPTVAPNGTMLIYATRQQGR--GVLMLVSLNGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|308049998|ref|YP_003913564.1| Tol-Pal system beta propeller repeat protein TolB [Ferrimonas
           balearica DSM 9799]
 gi|307632188|gb|ADN76490.1| Tol-Pal system beta propeller repeat protein TolB [Ferrimonas
           balearica DSM 9799]
          Length = 454

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 197/383 (51%), Gaps = 26/383 (6%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           ++S+VV+ DL RS  FN +      Q   + ++    + W + GA+ +V G+V ++G D+
Sbjct: 57  QISDVVTSDLARSGSFNPLPVTQLPQTAISNEAQMDLEAWVNTGAEAVVVGKVSQQGADQ 116

Query: 124 LRVEFRLWD-------------------VKDRKQII-GKKFFSSPASWRKIAHTISDDIY 163
            +V F L D                   VK    II G++   S A +R+  H ISD +Y
Sbjct: 117 FKVVFELVDLIRAQATGGDTQGFDGNGLVKTNDHIIEGRETVISKAQFRQYGHRISDLVY 176

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +++TG KG F ++I +V+    +   K  L V D DG N   L  SR+  L  P +SP+ 
Sbjct: 177 EALTGVKGAFLTKIAYVTVDESAAPFKFQLRVADYDGYNETVLLRSREP-LMSPSWSPDG 235

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +K+AY ++++     +Y+ D    +  +R+ +F  +  +P +S +GK+  +++ KD + +
Sbjct: 236 RKLAYVSFENRRS-EIYVQDLYTQQR-ERVTSFAGINGSPSWSPDGKQLAMTLSKDGSSE 293

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           IY++DL + A +R+TN   I+   +++PD   +VF S+R G+ Q+Y +  +    +R++ 
Sbjct: 294 IYTLDLATRALKRITNHYAIDTEPTWAPDGKSLVFTSERGGRPQIYRVYLDSGRIQRLTF 353

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             E +    + +P G  +     +  KF I  M+       +L E    ++P+ +P+G  
Sbjct: 354 QGEWNLGGSM-TPDGRYLVMVNRTNGKFNIARMELSTGYMDVLTETYLDESPSVAPNGSM 412

Query: 404 LIFSRKKDGDTGSKLYSIDLNGR 426
           +I+    +G     L ++ ++GR
Sbjct: 413 IIYGTTHNGR--QVLAAVSMDGR 433


>gi|264677753|ref|YP_003277659.1| protein tolB [Comamonas testosteroni CNB-2]
 gi|299529321|ref|ZP_07042760.1| translocation protein TolB [Comamonas testosteroni S44]
 gi|262208265|gb|ACY32363.1| protein tolB [Comamonas testosteroni CNB-2]
 gi|298722699|gb|EFI63617.1| translocation protein TolB [Comamonas testosteroni S44]
          Length = 417

 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 189/411 (45%), Gaps = 16/411 (3%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
           +V       + + IA  +F        K+S ++  DL+RS  F  +         T   S
Sbjct: 18  RVEVTGVGLTQLPIAIAQFKGEGSAPQKISAIIQADLERSGQFRGVDASGLALDET---S 74

Query: 97  IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            P    W   GA  L TG + +    R  V FRLWDV   + + G+ F  +    R +AH
Sbjct: 75  RPDVAQWRQKGADSLATGSITRLADGRWDVRFRLWDVVKGQDLGGQGFAVTTGDLRLVAH 134

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            I+D IY+ +TGEKG F++RI +V+++         L + D DG N +    S + I+  
Sbjct: 135 RIADYIYEKLTGEKGIFSTRIAYVTKAGA----HYRLWIADADGENAQSALSSPEPII-S 189

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALIS 275
           P ++PN  ++AY +++    + VY+ D  +    +R + NFR    AP +S +G R  ++
Sbjct: 190 PAWAPNGTQLAYVSFESRKPV-VYVHD--VASGHRRLLANFRGSNSAPAWSPDGSRLAVT 246

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + +D    +Y +  Q     RL  +  I+    +S D   I F SDR G  Q+Y + S+G
Sbjct: 247 LSRDGGSQLYLLSAQGGEPRRLMQSSGIDTEPCFSSDGRTIYFVSDRGGAPQVYKVSSSG 306

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              +R++     +   P  SP G  +A+    G  F + VM         + + +  ++P
Sbjct: 307 GSAERVTFTGNYN-ISPAISPDGKWLAYISRVGGGFKLQVMDLATGTVNSVTDTTADESP 365

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
           +++P+ R ++++  + G     L +  L+G+    L        +P W  F
Sbjct: 366 SFAPNSRLIVYATIQGGR--EALMTTTLDGKIKARLAGASGDIREPDWGPF 414


>gi|302879781|ref|YP_003848345.1| Tol-Pal system beta propeller repeat protein TolB [Gallionella
           capsiferriformans ES-2]
 gi|302582570|gb|ADL56581.1| Tol-Pal system beta propeller repeat protein TolB [Gallionella
           capsiferriformans ES-2]
          Length = 422

 Score =  152 bits (384), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 187/394 (47%), Gaps = 20/394 (5%)

Query: 56  VSIDELGG------KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
           VS+  +GG      +++EVVS DL R+ +F L+  D+  +    P  +  + DW   GA+
Sbjct: 38  VSLVPMGGDAKLAQEINEVVSGDLLRTGLFRLV--DTTGKAPHEPAEV-NYTDWQLRGAE 94

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            L  G V  +   R+   FRL DV    +++G+         R + H I+D IY+ +TG 
Sbjct: 95  ALAIGTVSLQASGRIEARFRLLDVLKHVELVGQAVSVGNGQVRAVGHRIADLIYEKLTGN 154

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            G F++RI +V+    S      L V D DG N + +    + I+  P +SP+   +AY 
Sbjct: 155 PGVFSTRIAYVNRQGRS----FRLIVADSDGYNEQIVLKQNEPIM-SPSWSPDGSHLAYV 209

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +++         + +      K + ++R    AP +S +G++  + + +D    IY +  
Sbjct: 210 SFETGHA--AVFVQSLYTNLRKVVADYRGSNSAPAWSPDGRQLAVVLTRDGGSQIYLMRP 267

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
             +   R++ +  I+   ++SPD   ++F SDR G  Q+Y M   G   +R++     S 
Sbjct: 268 DGSELRRISFSGGIDTEPNFSPDGLSLLFTSDRGGSAQVYRMPVEGGGAQRMT-FASGSC 326

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           F P +SP G    FT  SG +F I V      Q   L E    + P+++P+G+ ++F+ +
Sbjct: 327 FSPRYSPDGKSFVFTHLSGGRFYISVQDFQTGQAEALTEGGWEKKPSYAPNGKLILFASE 386

Query: 410 KDGDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
             G     L ++  +GR  + +      A +P W
Sbjct: 387 ARGR--GILATVSSDGRVKQHMFTQSGDAREPVW 418


>gi|332525604|ref|ZP_08401759.1| translocation protein TolB [Rubrivivax benzoatilyticus JA2]
 gi|332109169|gb|EGJ10092.1| translocation protein TolB [Rubrivivax benzoatilyticus JA2]
          Length = 434

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/401 (26%), Positives = 201/401 (50%), Gaps = 19/401 (4%)

Query: 48  VSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLI-SQDSFKQKITNPDSIPRFQDWNSL 106
           + IA   F     L   VS +V  DL RS +F +  S  +  ++     S+    DW + 
Sbjct: 48  IPIAIAPFRDEGALPTPVSGIVGADLARSGMFRVAGSPVALDER-----SVVAAADWRAR 102

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           G   +V G V +    RL + F LWD+   +Q++ +      A  R  AH I+D I++++
Sbjct: 103 GVDAVVAGSVTRMADGRLDIRFTLWDIVKGEQLVAQSKLVLAADLRLTAHRIADAIHEAL 162

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           TGE+G   +RI++    VV    + +L V D DG   +    S + I+  P +SP+ +++
Sbjct: 163 TGERGVNATRIVY----VVKAGKRYTLNVTDADGEGGQVALASPEPII-SPAWSPDGREL 217

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           AY +++ +  + V++ D  I  + +++ +FR    AP +S +G+   +++ +D    +Y+
Sbjct: 218 AYVSFETQKAV-VWVQDL-ITGSRRKLADFRGSNSAPAWSPDGRELAMTLTRDGISQLYA 275

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +        RLT++  I+    Y+PD   I F SDR G  Q+Y +  +G   +R++    
Sbjct: 276 MPRAGGTPRRLTSSSAIDTEPVYAPDGRSIFFVSDRGGGPQVYRLPLDGGGPQRVT--FT 333

Query: 347 ASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             Y   P  SP G L+A+    G+ F +  +       R L +  + ++P+++P+G+ ++
Sbjct: 334 GGYNISPAVSPDGKLLAYISRQGDAFKLMTLDLAAGGVRTLTDTRDDESPSFAPNGKLIV 393

Query: 406 FSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVGF 445
           ++ ++ G     L +  L+G  +T L+++ A   +P W  F
Sbjct: 394 YATRQQGR--DVLMTTTLDGSFKTRLVSSGADMREPAWGPF 432


>gi|301632611|ref|XP_002945375.1| PREDICTED: protein tolB-like, partial [Xenopus (Silurana)
           tropicalis]
          Length = 554

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 194/395 (49%), Gaps = 17/395 (4%)

Query: 34  AFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLI-SQDSFKQKIT 92
           A  +V       + + IA   F    +   ++S +V  DL+RS  F  I +  +   +I+
Sbjct: 1   AQFRVEVTGVGLTQLPIALAPFRGEAQSPQRISAIVQADLERSGQFRGIDAAGAALDEIS 60

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
            PD       W    A  LVTG +++    R  V FRLWDV   + + G+ F  +    R
Sbjct: 61  RPD----MAQWRQKSADSLVTGSIMRLADGRYDVRFRLWDVVRAQDLGGQSFVVNQGDLR 116

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
            +AH I+D +Y+ +TGE+G F++R+ +V+++      + SL V D DG N +    S + 
Sbjct: 117 LVAHRIADFVYEKLTGERGVFSTRVTYVTKAGG----RYSLWVADADGENAQAALSSTEP 172

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           I+  P ++PN  ++AY +++    + VY+ D    R  + I NFR    AP +S +G++ 
Sbjct: 173 II-SPAWAPNGTQLAYVSFESRKPV-VYVHDVASGRR-RLIANFRGSNSAPAWSPDGRQL 229

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +++ +D +  +Y++D       RL  +  I+    +S D   I F SDR G  Q+Y + 
Sbjct: 230 AVTLTRDGSSQLYTIDANGGEPRRLMQSSGIDTEPVFSGDGRTIYFVSDRGGAPQIYKVG 289

Query: 333 SNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           + G + +R++     SY   P  SP G  +A+    G  F +  M         + + + 
Sbjct: 290 ATGGNAERVT--FSGSYNISPSVSPDGRWLAYISRVGGAFKLHAMDLGTGAVNAITDTTA 347

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            + P+++P+ R ++++ ++ G     L +  L+G+
Sbjct: 348 DENPSFAPNSRLIVYATQQQGR--EALMTTTLDGK 380


>gi|163796374|ref|ZP_02190335.1| Periplasmic component of the Tol biopolymer transport system [alpha
           proteobacterium BAL199]
 gi|159178516|gb|EDP63058.1| Periplasmic component of the Tol biopolymer transport system [alpha
           proteobacterium BAL199]
          Length = 228

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 81/211 (38%), Positives = 122/211 (57%), Gaps = 4/211 (1%)

Query: 24  IGGFF-PTSIHAFVKVATNSANYSPVSIAFTKFVSID--ELGGKVSEVVSKDLQRSDVFN 80
           +GGF  P +    + +        PV+IA  K   I+   +G +++ ++  DL+RS +F 
Sbjct: 19  VGGFAKPAAAELRIDITQGRVEPLPVAIADFKGEGIEPTRIGREIAGIIRADLERSGLFK 78

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
            I Q++F Q     D +PRF DW  + AQ LV GRV + G+ ++RVEFRLWDV   + + 
Sbjct: 79  PIDQNAFIQTDLQFDVVPRFGDWRLINAQALVHGRVTEIGQGQVRVEFRLWDVFAEQYMT 138

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G      P S R+ AH I+D IY+ +TGE G F+SRI++++ES      K  L +MD+DG
Sbjct: 139 GTTLTVIPESLRRAAHIIADLIYKRLTGEDGYFDSRIVYIAESGAQNRRKKQLAIMDQDG 198

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           AN ++LT     ++  PRFSP  Q++ Y  Y
Sbjct: 199 ANHKFLTDG-GTLVLTPRFSPTHQEITYLAY 228


>gi|241662341|ref|YP_002980701.1| translocation protein TolB [Ralstonia pickettii 12D]
 gi|240864368|gb|ACS62029.1| Tol-Pal system beta propeller repeat protein TolB [Ralstonia
           pickettii 12D]
          Length = 434

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 191/417 (45%), Gaps = 16/417 (3%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
           HA + V  +    S   IA   F    +    +S +V  DL RS  F+ +        + 
Sbjct: 30  HAQLNVEISGVGASQYPIAIANFQGEAQAPQNLSAIVRADLARSGRFSNVD---VAGAVV 86

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
                P    W S GA   V G V + G DR  + FRL+D    + + G      P   R
Sbjct: 87  PESPAPDLGAWKSKGAAAFVGGTVTRNG-DRYEIRFRLYDTAKGESLGGLSLTRGPGQLR 145

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
             AH I+D IYQ + GE+G F +R+ +VS+       +  L + D DGAN +    S + 
Sbjct: 146 LAAHEIADYIYQKLIGERGVFATRLSYVSKVGR----RFQLQISDSDGANPQIALTSNEP 201

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           I+  P +SP+  KVAY +++ +  + VY+ D    R    I N +    AP +S +G+  
Sbjct: 202 II-SPSWSPDGTKVAYVSFESKKPV-VYVHDLVAGRR-TVISNQKGNNSAPAWSPDGRHV 258

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +S+ +D    +Y V+   +   RL+ +  I+   S+SPD   I F SDR G  Q+Y M 
Sbjct: 259 AVSLSRDGNTQVYLVNADGSGLRRLSRSSAIDTEPSFSPDGRYIYFTSDRGGAPQIYRMS 318

Query: 333 SNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +G +     +      ++  P  SP G L+A+    G  F +            L + S
Sbjct: 319 VDGEEAGAAQRVTFKGNYNTSPRVSPDGKLLAYISRVGGAFRLYTQDLSNGDVNALTDTS 378

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVGFM 446
           N ++P+++ +G+ ++++ +  G   S L ++  +GR   +++  A    +P W  FM
Sbjct: 379 NDESPSFAANGKFILYATRVGGK--SVLAAVSTDGRTRQVLSLQAGEVREPAWGPFM 433


>gi|17545454|ref|NP_518856.1| translocation protein TolB [Ralstonia solanacearum GMI1000]
 gi|32699708|sp|Q8Y1F5|TOLB_RALSO RecName: Full=Protein tolB; Flags: Precursor
 gi|17427746|emb|CAD14265.1| probable protein tolb precursor [Ralstonia solanacearum GMI1000]
          Length = 432

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 206/435 (47%), Gaps = 24/435 (5%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           + LL+VL  G     +  +V++A   ++  P++IA   F    ++   ++ +V  DL  S
Sbjct: 16  IGLLMVLCVGVARAQL--YVEIAGAGSSQYPIAIA--NFQGESQIPQDITAIVRADLVHS 71

Query: 77  DVFNLISQDSFKQKITNPDS-IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
             F+ +           PDS  P    W S GA   V G V + G DR  + FRL+D   
Sbjct: 72  GRFSNVD----VAGAVVPDSPAPDLGAWKSRGAAAFVGGTVTRNG-DRYEIRFRLYDTAK 126

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            + + G          R  AH I+D IYQ + G++G F +R+ +VS+       +  L +
Sbjct: 127 GESLGGLALTRGEGQLRLAAHEIADYIYQKLIGDRGVFATRLSYVSKVGR----RYQLQI 182

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DGAN +    S + I+  P +SP+  KVAY +++    + VY+ D  I      I N
Sbjct: 183 SDSDGANPQVALTSNEPII-SPAWSPDGTKVAYVSFESRKPV-VYVHDL-ISGRRAVISN 239

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +    AP +S +G+R  +++ +D    IY V+   +   RLT +  I+   S+SPD   
Sbjct: 240 QKGNNSAPAWSPDGRRVAVALSRDGNTQIYQVNADGSGLRRLTRSSAIDTEPSFSPDGRS 299

Query: 316 IVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           I F SDR G  Q+Y M + G D    +R++  K      P  SP G L+A+    G  F 
Sbjct: 300 IYFTSDRGGAPQIYRMPTEGEDAGSAQRVTF-KGGYNTSPRVSPDGKLLAYISRVGGAFK 358

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + V          L + S  ++P+++ +G+ ++++ +  G   S L ++  +GR   +++
Sbjct: 359 LYVQDLSNGDVTGLTDTSYDESPSFAANGKFILYATRVGGR--SVLAAVSTDGRTRQILS 416

Query: 433 TPA-YASDPQWVGFM 446
             A    +P W  FM
Sbjct: 417 LQAGTVREPAWGPFM 431


>gi|262375578|ref|ZP_06068811.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           lwoffii SH145]
 gi|262309832|gb|EEY90962.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           lwoffii SH145]
          Length = 427

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 205/414 (49%), Gaps = 19/414 (4%)

Query: 17  LCL-LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
           LCL ++  +G    T   A + +    A  +   IA   F S D+    +  VV  DL R
Sbjct: 9   LCLAIMTTLGAVTATQSQAQLHLEITKAPEAAPKIAIVPF-SQDQ---SIYPVVENDLNR 64

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  F   S++       N    P  + W + G   +VTG           ++++L+DV+ 
Sbjct: 65  SGKFASASKNLPATAQLN---SPNAEAWAAAGVPYVVTGSSKTNPDGSYSIQYQLYDVEK 121

Query: 136 RKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           R+ ++  +  + PAS  R+ AH ISD IYQ++TG  GDF  RI +V  +  +   + +L 
Sbjct: 122 RQYLL-NELLTVPASRTRQAAHMISDAIYQALTGIPGDFTGRIAYVLRNPATPERRYTLQ 180

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D DG   + +  SRD IL  P ++P+ +K+AY +++ +    +Y+ D    +  +++ 
Sbjct: 181 IADTDGEQPKTILTSRDPIL-SPAWTPDAKKIAYVSFETKRPA-IYVQDLATGQR-EKLA 237

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +FR +  AP FS +GK  L +       +IY ++L++   +R+TN   I+  A Y+PD  
Sbjct: 238 SFRGLNGAPSFSPDGKSMLFTASMHGNPEIYQMNLETRQLKRMTNDSAIDTEARYAPDGK 297

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAI 373
             +F SDR G  Q+Y    N    KR++  + A       S  G  +A   + SG  + +
Sbjct: 298 SFIFTSDRGGSPQIYRYDFNNESTKRLT-FRGAFNARATLSADGKKLALVHRPSGSNYKV 356

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGR 426
            V         +L   S  ++P++SP+G+ ++++  ++G+ G  L SI  L+GR
Sbjct: 357 AVQDISSGVTNILTPTSLDESPSFSPNGQMVVYA-TREGNRG--LLSIMSLDGR 407


>gi|118574600|sp|Q2LRP7|TOLB_SYNAS RecName: Full=Protein tolB; Flags: Precursor
          Length = 452

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 201/418 (48%), Gaps = 19/418 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID------E 60
           +   + + +  C + +    F   S+   V +  +S  +  + IA   F  ++      +
Sbjct: 4   VRRGMGVLLLFCAVALCAMPFVVRSVWGKVYIDIDSPAFQKIPIAVADFAPLNGNQGHAD 63

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI---PRFQDWNSLGAQVLVTGRVI 117
           L       V K L  +  FN++++    +  +   ++     + +W SLGA+ L+ G   
Sbjct: 64  LSSWFPGAVRKTLDLTGYFNILNRTGGPRDQSQTGAVQAQAAYGEWRSLGAEYLIQGGFS 123

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
             G  +L  EFRL D+   +Q++GK++       R +      ++   +TG +G F++RI
Sbjct: 124 SRGT-QLVAEFRLIDIVQGRQLMGKQYTGGFEDRRDMVIRFVQEVLSLLTGGEGFFDTRI 182

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD--ED 235
            FV     S  +         DG ++  +  S   IL  PR+SP+ + +A+++Y D   D
Sbjct: 183 AFVVRQGRSSSLHTVGFGSQIDGRDLARVAGSPSLIL-SPRWSPDGRYLAFSSYRDGKPD 241

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           I  V    + +    K+I +F+ + L   +S +G+  L+++ KD   +IY +D++S    
Sbjct: 242 IFVVSPSGSGL----KKIVSFQGLNLPGAWSPDGRSLLLTLSKDGNEEIYVMDVRSGQVR 297

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           RLT    I++S  +SPD  +I F S+  G  Q+YVM ++G D +R++     +   P WS
Sbjct: 298 RLTRNSAIDVSPVWSPDGRRIAFVSNISGSPQIYVMNADGGDVRRLTYSGNYNT-TPAWS 356

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG 412
           P+G  IA+    G  + I  + +DG   R L   + + + P+WSP GR L FS +  G
Sbjct: 357 PRGGKIAYEGKVGSGYQIFSIDEDGGNVRQLTSGAGDHEFPSWSPDGRFLTFSLRSGG 414



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 11/123 (8%)

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           Q +G D  R++    +    P WSP G  +AF+ +   K  I V+   GS  + +V    
Sbjct: 202 QIDGRDLARVA-GSPSLILSPRWSPDGRYLAFSSYRDGKPDIFVVSPSGSGLKKIVSFQG 260

Query: 392 LQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-------RNETLINTPAYASDPQWV 443
           L  P  WSP GRSL+ +  KDG+   ++Y +D+         RN  +  +P ++ D + +
Sbjct: 261 LNLPGAWSPDGRSLLLTLSKDGN--EEIYVMDVRSGQVRRLTRNSAIDVSPVWSPDGRRI 318

Query: 444 GFM 446
            F+
Sbjct: 319 AFV 321


>gi|118574593|sp|Q3K7W5|TOLB_PSEPF RecName: Full=Protein tolB; Flags: Precursor
          Length = 433

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 207/415 (49%), Gaps = 10/415 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           + V + S   +P+++    F     L   ++E++  DL+ S  ++ I + +   + + P 
Sbjct: 26  ILVTSGSDRATPIAVVPFGFQGGAVLPDDMAEIIGNDLRNSGYYSPIPKQNMISQPSQPS 85

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
            I  F+DW ++GAQ ++ G ++  G  RL+V++ L++V   +++       +    R +A
Sbjct: 86  EI-IFRDWKAVGAQYMMVGSIVPAG-GRLQVQWALFNVATEQKVADGSVSGTTEQLRDMA 143

Query: 156 HTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           H ISD  ++ +TG KG F++R+L+V+ E       + +L   D DGA    L  SR+ IL
Sbjct: 144 HYISDQSFEKLTGIKGAFSTRLLYVTAERFSEKNTRYTLQRSDYDGARAVTLLQSREPIL 203

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             PRF+P+ +++AY +++ +   R+++ +    R  ++I NF  +  AP +S +G R   
Sbjct: 204 -SPRFAPDGKRIAYVSFEQKRP-RIFMQNIDTGRR-EQITNFEGLNGAPAWSPDGNRLAF 260

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + KD   DIY ++L S    R+T    IN    +  D S I F SDR GK Q+Y   + 
Sbjct: 261 VLSKDGNPDIYVMNLGSRQITRVTAGPGINTEPYWGKDGSTIYFTSDRGGKPQIYKTSAG 320

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQ 393
           G   +R++     +    + + +  L+   +  G   F +          ++L + +  +
Sbjct: 321 GGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFTNFKVAAQDLQRGSVKILTDSTLDE 380

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFMD 447
           +PT +P+G  +I++ ++ G     L  + +NGR    + T      +P W  +++
Sbjct: 381 SPTVAPNGTMVIYATRQQGR--GVLMLVSINGRVRLPLPTAQGEVREPSWSPYLN 433


>gi|309780840|ref|ZP_07675581.1| Tol-Pal system beta propeller repeat protein TolB [Ralstonia sp.
           5_7_47FAA]
 gi|308920522|gb|EFP66178.1| Tol-Pal system beta propeller repeat protein TolB [Ralstonia sp.
           5_7_47FAA]
          Length = 434

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 191/417 (45%), Gaps = 16/417 (3%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
           HA + V  +    S   IA   F    +    +S +V  DL RS  F+ +        + 
Sbjct: 30  HAQLNVEISGVGASQYPIAIANFQGEAQAPQNLSAIVRADLARSGRFSNVD---VAGAVV 86

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
                P    W + GA   V G V + G DR  + FRL+D    + + G      P   R
Sbjct: 87  PESPAPDLGAWKTKGAAAFVGGTVTRNG-DRYEIRFRLYDTAKGESLGGLSLTRGPGQLR 145

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
             AH I+D IYQ + GE+G F +R+ +VS+       +  L + D DGAN +    S + 
Sbjct: 146 LAAHEIADYIYQKLIGERGVFATRLSYVSKVGR----RFQLQISDSDGANPQIALTSNEP 201

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           I+  P +SP+  KVAY +++ +  + VY+ D    R    I N +    AP +S +G+  
Sbjct: 202 II-SPSWSPDGTKVAYVSFESKKPV-VYVHDLVAGRR-TVISNQKGNNSAPAWSPDGRHV 258

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +S+ +D    +Y V+   +   RL+ +  I+   S+SPD   I F SDR G  Q+Y M 
Sbjct: 259 AVSLSRDGNTQVYLVNADGSGLRRLSRSSAIDTEPSFSPDGRYIYFTSDRGGAPQIYRMS 318

Query: 333 SNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +G +     +      ++  P  SP G L+A+    G  F +            L + S
Sbjct: 319 VDGEEAGAAQRVTFKGNYNTSPRVSPDGKLLAYISRVGGAFRLYTQDLSNGDVNALTDTS 378

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVGFM 446
           N ++P+++ +G+ ++++ +  G   S L ++  +GR   +++  A    +P W  FM
Sbjct: 379 NDESPSFAANGKFILYATRVGGK--SVLAAVSTDGRTRQVLSLQAGEVREPAWGPFM 433


>gi|192362452|ref|YP_001981531.1| tolB protein [Cellvibrio japonicus Ueda107]
 gi|190688617|gb|ACE86295.1| tolB protein [Cellvibrio japonicus Ueda107]
          Length = 427

 Score =  151 bits (381), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/438 (27%), Positives = 218/438 (49%), Gaps = 24/438 (5%)

Query: 20  LLVLIGGFFPTSIHAFVK-VATNSANYSPVSIAFTKFVSIDELGGK----VSEVVSKDLQ 74
           L+ ++   F    HA +  V    +  +P+ IA   F   D  GG+    VS ++  D +
Sbjct: 4   LVFILFSVFAMVAHAQMNNVIVTQSVQNPIKIAVVPF---DWAGGRLPEDVSSIIRNDFR 60

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S  F+ I+ +       +   I  ++DW  LGA+ L+ G + ++   R    + L+DV 
Sbjct: 61  FSGQFDPIAPERMLSFPVSEVGI-HYRDWKVLGAEYLLIGSLTQQA-GRYYASYELFDVV 118

Query: 135 DRKQIIGKKFF-SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            ++++  K     +    R IAH ISD +Y++ITG +G F++++++V         +  L
Sbjct: 119 KQQRVFAKLTVDGTELQLRDIAHHISDKVYETITGIRGIFSTKLIYVE--AYQHPQRYRL 176

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            + D DGA  R L  SR  IL  P +SPN Q+VAY +++ E+   +Y+MD    R  +++
Sbjct: 177 MLSDIDGARSRALLDSRFPIL-SPVWSPNGQRVAYVSFEAENKPAIYIMDIATQRR-QQM 234

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +FR +  AP +S +G++  + + KD   +IY +++ +   +R+TN   I+   S++ D 
Sbjct: 235 TSFRGLNGAPSWSPDGQKLAMVLSKDGNPEIYVMNVLTRQLDRVTNHFAIDSEPSWAADG 294

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEKFA 372
           + + F SDR GK Q+Y +      Q+R++ D + +    V SP G  L+   K  G  + 
Sbjct: 295 ASLYFTSDRGGKPQIYQVNLATKQQERVTFDGDYNARSRV-SPDGKYLVVLNKRPGGNYH 353

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           I          R+L E +  ++P+ +P+G  L+++ +  G     L ++ L+ R + L  
Sbjct: 354 IAAQDLKTGNLRILSETNLDESPSIAPNGAMLMYATRSGGK--GVLAAVSLDARVKIL-- 409

Query: 433 TPAYASD---PQWVGFMD 447
            P    D   P W  F +
Sbjct: 410 QPPKQGDVREPAWSPFFN 427


>gi|145297814|ref|YP_001140655.1| translocation protein TolB [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166988074|sp|A4SJ35|TOLB_AERS4 RecName: Full=Protein tolB; Flags: Precursor
 gi|142850586|gb|ABO88907.1| Periplasmic component of the Tol biopolymer transport system
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 441

 Score =  151 bits (381), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 208/416 (50%), Gaps = 25/416 (6%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P++IA  K+    +L   ++EVVS DL RS  F  +++    Q  ++   I  F  W S 
Sbjct: 36  PIAIAPFKWEGNGQLPQDIAEVVSNDLMRSGKFKPLARGQMPQTPSSSGEI-NFAPWASQ 94

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDV-----------KDRKQIIGKKFFSSP-ASWRKI 154
           G + +V G +   G    ++ F L DV           +    I+  +  + P A  R+ 
Sbjct: 95  GVEAVVVGSIAAVGDGTYKINFELVDVLKGQLAKTQGGESNGYILDSRMATIPGAQMRQF 154

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGI-IKNSLCVMDRDGANIRYLTPSRDQI 213
           AH ISD +Y+ +TGE+G F +RI +VS  +  G      L + D DG N + L  SR+  
Sbjct: 155 AHRISDIVYERLTGERGAFLTRIAYVS--IEQGAQFPYQLRISDYDGYNEKTLLRSREP- 211

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           L  P +SP+  K+AY +++++    +Y+ D   ++    I +FR +  AP++S +G+R  
Sbjct: 212 LMSPAWSPDGSKLAYVSFENQK-SEIYVQDI-YNQQRSLISSFRGINGAPKWSPDGRRLA 269

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           I + KD   DIY +D+ S    R+TNT  I+   ++ PD   ++F S+R GK Q+Y +  
Sbjct: 270 IVLSKDGQPDIYVIDVASKQLTRVTNTRVIDTEPAWMPDGQTLIFTSERGGKPQIYSVNL 329

Query: 334 NGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                +R++ + E++    V +P G  ++  T+  G+ + I     +     +L + +  
Sbjct: 330 ATGVTRRMTWEGESNQGASV-TPDGKSMVMVTRVQGQ-YRIARQDMESGAMLVLTQSALD 387

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVGFMD 447
           ++P+ +P+G  +I++    G     L S D  GR + ++ T +     P W  F++
Sbjct: 388 ESPSVAPNGSMIIYATIYQGRKSLALVSTD--GRFKAVLPTSSGEIRAPAWSPFLN 441


>gi|222111173|ref|YP_002553437.1| translocation protein tolb [Acidovorax ebreus TPSY]
 gi|221730617|gb|ACM33437.1| Tol-Pal system beta propeller repeat protein TolB [Acidovorax
           ebreus TPSY]
          Length = 440

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 193/413 (46%), Gaps = 16/413 (3%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
           +V       + + IA   F    +   K+S +V  DL+RS  F  +          +  S
Sbjct: 41  RVEITGVGLTQLPIAIAPFRGEPQSPQKISAIVQADLERSGRFLGVDASGVA---LDESS 97

Query: 97  IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            P    W    A  L +G + +    R  V FRLWDV   + + G+ F  + A  R +AH
Sbjct: 98  RPDLSLWRQRKADALTSGSITRLADGRFDVRFRLWDVVKAQDLGGQSFVVTQADLRLVAH 157

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            I+D +Y+ +TGE+G F++RI +V+++      + SL V D DG N +    S + I+  
Sbjct: 158 RIADFVYEKLTGERGIFSTRIAYVTKAGS----RYSLWVADADGENAQSALSSPEPII-S 212

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P ++P   ++AY +++    + VY+ D    R  + I NFR    AP +S +G+   +++
Sbjct: 213 PAWAPTGTQLAYVSFESRKPV-VYVHDVATGRR-RLIANFRGSNSAPAWSPDGRTLAVTL 270

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D    +Y++D       RL  +  I+    +S D   I F SDR G  Q+Y + ++G 
Sbjct: 271 SRDGGSQLYTIDANGGEPRRLMQSSGIDTEPVFSSDGRSIYFVSDRGGSPQVYRVAASGG 330

Query: 337 DQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
             +R++ +   SY   P  SP G  +A+    G  + + VM         + + S  + P
Sbjct: 331 GAERVTFN--GSYNISPSISPDGQWLAYISRVGGAYKLHVMDFKSGSVTAVTDTSADENP 388

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFMD 447
           +++P+ R ++++ ++ G     L +  L+G+    L        +P W  F +
Sbjct: 389 SFAPNSRLIVYATQQQGR--EALMTTTLDGKIKARLAGQGGDIREPDWGPFQN 439


>gi|33598302|ref|NP_885945.1| translocation protein TolB [Bordetella parapertussis 12822]
 gi|67462003|sp|Q7W476|TOLB_BORPA RecName: Full=Protein tolB; Flags: Precursor
 gi|33566860|emb|CAE39075.1| putative TolB-like translocation protein [Bordetella parapertussis]
          Length = 441

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 188/386 (48%), Gaps = 16/386 (4%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
           P      V ++   A   PV+IA   F   D  G  ++EV+  DL R+  F LI+     
Sbjct: 36  PAQAQLRVDISGTGATQYPVAIA--DFAVDDTHGRALAEVIRADLTRTGQFRLINA---A 90

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
               N DS     DW + GA  L  G + +    R  V +RL D   + Q+ G  F  + 
Sbjct: 91  DSGLNVDSQVAHDDWRAKGADFLAYGSITRGPDGRYDVRYRLADTVKKGQLDGVAFSGTE 150

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R++AH I+D IY+ ITG +G F++RI +V +   +      L V D DG N +    
Sbjct: 151 QELRRVAHQIADRIYEKITGVRGVFSTRIAYVLKRGST----YELQVADADGQNPQVALR 206

Query: 209 SRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           SR+ I+  P +SP+  ++AY +++  + ++ V+ + T   R P  + NF+    AP +S 
Sbjct: 207 SREPII-SPSWSPDGSRLAYVSFESGKPVVYVHTLATSA-RIP--VANFKGNNSAPAWSP 262

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +G +  +++ +D    IY V     +   R+T +  I+   +++PD   I+F SDR G  
Sbjct: 263 DGSQLAVALTRDGLSQIYIVSAGGGSNMRRITRSPGIDTEPNFTPDGRSIIFTSDRSGGP 322

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Q+Y    +G D +R++ +   +   P  SP G  + +       F I  +      E LL
Sbjct: 323 QIYQTGLDGGDARRLTFNGGYN-ISPRISPDGSTLLYVARRDGAFRIASLNLSSGSETLL 381

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +  + Q+P+++P+G  ++++  ++G
Sbjct: 382 TDGRDDQSPSFAPNGMQVLYAAIQNG 407


>gi|77460623|ref|YP_350130.1| translocation protein TolB [Pseudomonas fluorescens Pf0-1]
 gi|77384626|gb|ABA76139.1| TolB colicin import protein [Pseudomonas fluorescens Pf0-1]
          Length = 414

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 207/415 (49%), Gaps = 10/415 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           + V + S   +P+++    F     L   ++E++  DL+ S  ++ I + +   + + P 
Sbjct: 7   ILVTSGSDRATPIAVVPFGFQGGAVLPDDMAEIIGNDLRNSGYYSPIPKQNMISQPSQPS 66

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
            I  F+DW ++GAQ ++ G ++  G  RL+V++ L++V   +++       +    R +A
Sbjct: 67  EI-IFRDWKAVGAQYMMVGSIVPAG-GRLQVQWALFNVATEQKVADGSVSGTTEQLRDMA 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           H ISD  ++ +TG KG F++R+L+V+ E       + +L   D DGA    L  SR+ IL
Sbjct: 125 HYISDQSFEKLTGIKGAFSTRLLYVTAERFSEKNTRYTLQRSDYDGARAVTLLQSREPIL 184

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             PRF+P+ +++AY +++ +   R+++ +    R  ++I NF  +  AP +S +G R   
Sbjct: 185 -SPRFAPDGKRIAYVSFEQKR-PRIFMQNIDTGRR-EQITNFEGLNGAPAWSPDGNRLAF 241

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + KD   DIY ++L S    R+T    IN    +  D S I F SDR GK Q+Y   + 
Sbjct: 242 VLSKDGNPDIYVMNLGSRQITRVTAGPGINTEPYWGKDGSTIYFTSDRGGKPQIYKTSAG 301

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQ 393
           G   +R++     +    + + +  L+   +  G   F +          ++L + +  +
Sbjct: 302 GGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFTNFKVAAQDLQRGSVKILTDSTLDE 361

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFMD 447
           +PT +P+G  +I++ ++ G     L  + +NGR    + T      +P W  +++
Sbjct: 362 SPTVAPNGTMVIYATRQQGR--GVLMLVSINGRVRLPLPTAQGEVREPSWSPYLN 414


>gi|26987957|ref|NP_743382.1| translocation protein TolB [Pseudomonas putida KT2440]
 gi|60415976|sp|P0A173|TOLB_PSEPK RecName: Full=Protein tolB; Flags: Precursor
 gi|60415977|sp|P0A174|TOLB_PSEPU RecName: Full=Protein tolB; Flags: Precursor
 gi|24982670|gb|AAN66846.1|AE016313_5 tolB protein [Pseudomonas putida KT2440]
 gi|5514779|emb|CAB50781.1| TolB protein [Pseudomonas putida]
          Length = 433

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 215/441 (48%), Gaps = 23/441 (5%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
            L ++L  + G    +    + V + S   +P+++          L   +++++  DL+ 
Sbjct: 7   GLLVMLCCVAGM-AVAEEKNILVTSGSDRATPIAVVPFGLQGGSVLPEDIADIIGNDLRN 65

Query: 76  SDVF------NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           S  +      N+ISQ S   ++        F+DW +LGAQ ++ G ++  G  RL+V++ 
Sbjct: 66  SGYYSPIPRQNMISQPSQASEVI-------FRDWKALGAQYVMVGSIVPSG-GRLQVQYA 117

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGI 188
           L++V   +Q++      S    R +AH I+D  ++ +TG KG F++R+L+V+ E   +  
Sbjct: 118 LFNVATEQQVLTGSVAGSTDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSTNN 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            + +L   D DGA    L  SR+ IL  PRF+P+ +++AY +++ +   R+++ +    R
Sbjct: 178 TRYTLQRSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFVQNIDTGR 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +++ NF  +  AP +S +G R    + KD   DIY +++ S    R+T    IN    
Sbjct: 236 R-EQVTNFEGLNGAPAWSPDGSRLAFVLSKDGNPDIYVMNVASRQISRVTAGPGINTEPF 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +  D + + F SDR GK Q+Y    +G   +R++     +    + + +  L+   +  G
Sbjct: 295 WGKDGNTLYFTSDRGGKPQIYKQSVSGGGAERVTFVGNYNANPKLSADEKTLVMIHRQQG 354

Query: 369 -EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F +          ++L E S  ++PT +P+G  LI++ ++ G     L  + LNGR 
Sbjct: 355 FTNFKVAAQDLQRGSVKILSETSLDESPTVAPNGTMLIYATRQQGR--GVLMLVSLNGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|304312901|ref|YP_003812499.1| TolB protein [gamma proteobacterium HdN1]
 gi|301798634|emb|CBL46866.1| TolB protein [gamma proteobacterium HdN1]
          Length = 431

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 209/413 (50%), Gaps = 12/413 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           ++V+  + N +P+++    + S      ++S ++S DL RS +F  +++       T  D
Sbjct: 28  IEVSKGADNATPIAVVPFAWESGGRASDEISTIISADLYRSGMFKPLARSDMLSWPTRAD 87

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
            +  F+DW +LG + LV GR    G  +    F ++DV   + +  K   +S ++ R +A
Sbjct: 88  QV-FFRDWKALGMEYLVIGRWSNAG-GKYTASFEIFDVLAGRTM--KSATASASNPRWLA 143

Query: 156 HTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           H  +D I++++TG KG F +R+L+V+ E       +  L V D DG N + +  S++ IL
Sbjct: 144 HYTADLIFEALTGIKGAFATRLLYVTMERHGPRNQRYRLLVSDSDGYNEKVIRDSKEPIL 203

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P ++PN + + Y  +       +Y+ DT    A +RI +F  +  APRFS +G++  +
Sbjct: 204 -SPSWAPNGRHITYVAFQHSHP-GIYIQDTMTGSA-QRITSFPGLNGAPRFSPDGQKLAL 260

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ KD   +IY VD ++ A +R+T+   I+  A++SPD   +++ SDR G  Q+Y     
Sbjct: 261 TLSKDGNPEIYVVDTRTRALQRVTSHFAIDTEANWSPDGGSLIYTSDRSGGPQIYRQSLA 320

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
               +R++ D   +    + +P G  +A        F I V   +     +L +    ++
Sbjct: 321 TGAVERLTFDGNYNARASM-TPDGRFLAMVHQDSGGFQIAVQDLERGSFNVLTDTPLDES 379

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVGFM 446
           P+ +P+G  +I++  + G     + SID  GR +  L ++     +P W  FM
Sbjct: 380 PSIAPNGTMVIYATLERGRGVLGVVSID--GRVKVRLPSSVGEVREPAWSPFM 430


>gi|85858720|ref|YP_460922.1| tolB protein [Syntrophus aciditrophicus SB]
 gi|85721811|gb|ABC76754.1| tolB protein [Syntrophus aciditrophicus SB]
          Length = 496

 Score =  150 bits (379), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 201/418 (48%), Gaps = 19/418 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID------E 60
           +   + + +  C + +    F   S+   V +  +S  +  + IA   F  ++      +
Sbjct: 48  VRRGMGVLLLFCAVALCAMPFVVRSVWGKVYIDIDSPAFQKIPIAVADFAPLNGNQGHAD 107

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI---PRFQDWNSLGAQVLVTGRVI 117
           L       V K L  +  FN++++    +  +   ++     + +W SLGA+ L+ G   
Sbjct: 108 LSSWFPGAVRKTLDLTGYFNILNRTGGPRDQSQTGAVQAQAAYGEWRSLGAEYLIQGGFS 167

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
             G  +L  EFRL D+   +Q++GK++       R +      ++   +TG +G F++RI
Sbjct: 168 SRGT-QLVAEFRLIDIVQGRQLMGKQYTGGFEDRRDMVIRFVQEVLSLLTGGEGFFDTRI 226

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD--ED 235
            FV     S  +         DG ++  +  S   IL  PR+SP+ + +A+++Y D   D
Sbjct: 227 AFVVRQGRSSSLHTVGFGSQIDGRDLARVAGSPSLIL-SPRWSPDGRYLAFSSYRDGKPD 285

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           I  V    + +    K+I +F+ + L   +S +G+  L+++ KD   +IY +D++S    
Sbjct: 286 IFVVSPSGSGL----KKIVSFQGLNLPGAWSPDGRSLLLTLSKDGNEEIYVMDVRSGQVR 341

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           RLT    I++S  +SPD  +I F S+  G  Q+YVM ++G D +R++     +   P WS
Sbjct: 342 RLTRNSAIDVSPVWSPDGRRIAFVSNISGSPQIYVMNADGGDVRRLTYSGNYNT-TPAWS 400

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG 412
           P+G  IA+    G  + I  + +DG   R L   + + + P+WSP GR L FS +  G
Sbjct: 401 PRGGKIAYEGKVGSGYQIFSIDEDGGNVRQLTSGAGDHEFPSWSPDGRFLTFSLRSGG 458



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 11/123 (8%)

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           Q +G D  R++    +    P WSP G  +AF+ +   K  I V+   GS  + +V    
Sbjct: 246 QIDGRDLARVA-GSPSLILSPRWSPDGRYLAFSSYRDGKPDIFVVSPSGSGLKKIVSFQG 304

Query: 392 LQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-------RNETLINTPAYASDPQWV 443
           L  P  WSP GRSL+ +  KDG+   ++Y +D+         RN  +  +P ++ D + +
Sbjct: 305 LNLPGAWSPDGRSLLLTLSKDGN--EEIYVMDVRSGQVRRLTRNSAIDVSPVWSPDGRRI 362

Query: 444 GFM 446
            F+
Sbjct: 363 AFV 365


>gi|220915811|ref|YP_002491115.1| TolB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254764837|sp|B8JD21|TOLB_ANAD2 RecName: Full=Protein tolB; Flags: Precursor
 gi|219953665|gb|ACL64049.1| TolB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 434

 Score =  150 bits (379), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 195/406 (48%), Gaps = 24/406 (5%)

Query: 38  VATNSANYSPVSIAFTKFVSIDELGG---KVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
           +   S ++ P+ IA   F    + G    + +EVV  DL  S +F+++    F    +  
Sbjct: 28  IVVGSPDFRPLPIAVAAFQGEGDAGAAATQTAEVVRADLVLSGLFDVLDPRGFLADPSEG 87

Query: 95  DSIP--RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
            + P  RF  W  +GA  L   RV + G   L  E  L++V+  ++++ K      A  R
Sbjct: 88  FAAPSIRFARWADVGADGLAKARV-RRGPAGLEGELHLYEVRAGREVLVKLLRVDGADAR 146

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
            +AH ++D+I +  T E G F +RI     ++  G     L   D DG N + L   R  
Sbjct: 147 SLAHRMADEIVRYYTREPGIFATRI----AAIRRGRGTWELVTQDMDGGNQQVLLSER-S 201

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPRFSSNGKR 271
           IL  P + P+ +++   +Y      R  L   R  DRA + +G  R+      +S +G R
Sbjct: 202 ILMSPAWRPDGREILVTSYRSG---RPELWAYRFSDRAFRPLGRHRNA-FGGVYSPDGSR 257

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              +V +    D++ +        +LT+   I++S ++SPD  +I F SDR G  Q+YVM
Sbjct: 258 IAFTVSEGNVTDLWVMSADGAGARKLTSDPAIDVSPTWSPDGRRIAFVSDRSGTPQIYVM 317

Query: 332 QSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVED 389
            ++GS  +R++   + +Y   P WSP+GDLIAFT     K F + V+  D      + +D
Sbjct: 318 GADGSGARRLT--FQGNYNQTPQWSPRGDLIAFTARDERKVFDVFVVSPDSGAINRITQD 375

Query: 390 SNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                + P+W+P+GR +IF   ++G  G +L   D  G  +T + +
Sbjct: 376 QGRTNEEPSWAPNGRLMIFRTDRNG--GIQLVVSDARGDRQTPVTS 419


>gi|226942085|ref|YP_002797159.1| TolB [Laribacter hongkongensis HLHK9]
 gi|226717012|gb|ACO76150.1| TolB [Laribacter hongkongensis HLHK9]
          Length = 308

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 170/314 (54%), Gaps = 15/314 (4%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           DV  ++Q+ G  F   P   R++AH I+D IY++ITG+KG F +RI++V++    G    
Sbjct: 2   DVNQKRQLTGGSFAIEPKQGRQLAHLIADMIYEAITGQKGIFGTRIVYVAQQ---GRNSY 58

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVYLMDTRIDRAP 250
            L V D DGA  + L  S++  L  P +SP+  +VAY +++ +  ++ V+ + T   RA 
Sbjct: 59  ELRVADADGAGEQTLLRSKEP-LMSPVWSPDGSRVAYVSFETKKPVVYVHNVATGARRA- 116

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             + NF+    AP +S +G R  +++       IY V        RLT +  I+   +++
Sbjct: 117 --VANFKGSNSAPAWSPDGTRLAVALTLSGNTQIYLVGADGGTPRRLTQSQGIDTEPAFT 174

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGE 369
           PD S+I+F SDR G  Q+Y M ++G    R++   E +Y   P  SP G   AF +  G 
Sbjct: 175 PDGSRILFTSDRAGGPQIYSMPASGGPATRLTY--EGNYNVSPAVSPDGKSFAFVRREGG 232

Query: 370 KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           ++ + ++++ GS +   V D+   ++P+++P+G+ ++F+ ++ G     LY++  +G  +
Sbjct: 233 RYRV-MVQQFGSSQANYVSDTQFDESPSFAPNGKMILFASEQGGR--GVLYTVTADGLTK 289

Query: 429 TLINTPAYASDPQW 442
           T +       +P W
Sbjct: 290 TRLGASGDVMEPDW 303


>gi|300704850|ref|YP_003746453.1| protein tolb, component of the tol-pal system [Ralstonia
           solanacearum CFBP2957]
 gi|299072514|emb|CBJ43864.1| protein tolB, component of the tol-pal system [Ralstonia
           solanacearum CFBP2957]
          Length = 434

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 193/419 (46%), Gaps = 20/419 (4%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
           HA + V  +    S   IA   F    +    ++ +V  DL RS  F+ +        + 
Sbjct: 30  HAQLNVEISGVGSSQYPIAVAHFQGETQAPENITAIVRSDLARSGRFSNVD---VAGAVV 86

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
                P    W + GA   V G V + G DR  + FRL+D    + + G          R
Sbjct: 87  PESPAPDLGAWKTRGAAAFVGGTVTRSG-DRYEIRFRLYDTAKGESLGGLSLTRGEGQLR 145

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRD 211
             AH I+D IYQ + GE+G F +R+ +VS+     + ++  L + D DGAN +    S +
Sbjct: 146 LAAHEIADFIYQKLMGERGVFATRLSYVSK-----VGRHYQLQISDSDGANPQIALTSSE 200

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I+  P +SP+  KVAY +++    + VY+ D    R    I N +    AP +S +G+R
Sbjct: 201 PII-SPSWSPDGTKVAYVSFESRKPV-VYVHDLVTGRR-AVISNQKGNNSAPAWSPDGRR 257

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +++ +D    IY V+   +   RLT +  I+   S+SPD   I F SDR G  Q+Y M
Sbjct: 258 VAVALSRDGNTQIYLVNADGSGLRRLTRSSAIDTEPSFSPDGHSIYFTSDRGGAPQIYRM 317

Query: 332 QSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             +G D    +R++  K      P  SP G L+A+    G  F + V          L +
Sbjct: 318 PVDGEDAGGAQRVTF-KGGYNTSPRVSPDGKLLAYISRVGGAFKLYVQDLSNGDVTGLTD 376

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVGFM 446
            S  ++P+++ +G+ ++++ +  G   S L ++  +GR  +TL        +P W  FM
Sbjct: 377 TSYDESPSFAANGKFILYATRVGGR--SVLAAVSTDGRTRQTLSLQAGQVREPAWGPFM 433


>gi|71737813|ref|YP_275907.1| translocation protein TolB [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|119371049|sp|Q48FD0|TOLB_PSE14 RecName: Full=Protein tolB; Flags: Precursor
 gi|71558366|gb|AAZ37577.1| tolB protein [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 433

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 219/440 (49%), Gaps = 15/440 (3%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVK---VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           INL   L+++  F    + A  K   V + S   +P+++    +   + L   ++E+VS 
Sbjct: 2   INLFRGLLVVLCFASAMVSAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIVSN 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L+
Sbjct: 62  DLRNSGYYAPIPKQNMISLPTQASEV-IFRDWKALGAQYVMVGNITPAG-GRLQIQYALF 119

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIK 190
           +V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+ E       +
Sbjct: 120 NVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNTR 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L   D DGA    L  SR+ IL  PRF+P+ +++AY +++ +   R+++      R  
Sbjct: 180 YTLQRSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGRR- 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    + 
Sbjct: 237 EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFFG 296

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-E 369
            D S + F SDR GK Q+Y    NG   +R+S     +    + + +  L+   +  G  
Sbjct: 297 KDGSTLYFTSDRGGKPQIYKTNINGGGAERVSFVGNYNANPKLSADEKTLVMIHRQDGFT 356

Query: 370 KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            F + V        ++L  DSNL ++PT +P+G  +I++ ++ G     L  + +NGR  
Sbjct: 357 NFKVAVQDLARGSVKILT-DSNLDESPTVAPNGTMVIYATRQQGR--GVLMLVSINGRVR 413

Query: 429 TLINTP-AYASDPQWVGFMD 447
             + T      +P W  +++
Sbjct: 414 LPLPTAQGEVREPSWSPYLN 433


>gi|289207751|ref|YP_003459817.1| Tol-Pal system beta propeller repeat protein TolB [Thioalkalivibrio
           sp. K90mix]
 gi|288943382|gb|ADC71081.1| Tol-Pal system beta propeller repeat protein TolB [Thioalkalivibrio
           sp. K90mix]
          Length = 428

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 200/408 (49%), Gaps = 10/408 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           V V        PV++A   +    EL   +S++V+ +L RS +FN + QD      + P 
Sbjct: 26  VTVTEGVTGAIPVAVAPFTYEGEGELDEDISQIVAANLARSGLFN-VEQDDLPAAPSGPA 84

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
                  W   G + LV G   ++G D L VEF ++DV   +++ G +        R+ A
Sbjct: 85  DF-LAGPWADAGVEYLVVGNQRRDGDDVL-VEFHVFDVLSEERLGGWRIPVPGDMLRRGA 142

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H ISD IY+ ITG+ G F++RI FVS        + +L V D DGAN R L  S   I+ 
Sbjct: 143 HRISDIIYEQITGDPGAFSARIAFVSVERNGDERRFALEVADSDGANPRTLFRSAKPIM- 201

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +SP+ +++ Y ++++     VY  +     + +R+ +F  +  AP +S +G+   +S
Sbjct: 202 SPDWSPDGRELVYVSFENRRS-EVYRQNVETG-SRERVASFTGINSAPAWSPDGRYLALS 259

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + +D A +IY ++L++    ++T T  I     +SPD   + F SDR G  Q+Y +   G
Sbjct: 260 LSRDGAPNIYLMELETGEMRQMTQTRSIETEPVWSPDGETLYFTSDRAGAPQIYALPREG 319

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              +R++ +   +    V SP G  + +       F +  +  +  +   L E  + ++P
Sbjct: 320 GSPRRLTFESGYAAAATV-SPDGRYLVYVHGGDGGFQLARLDLNDRRVTRLTEGRDAESP 378

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           +++P+G  +I++   DG  G  L S+  +G+ ++ L        +P W
Sbjct: 379 SFAPNGSMIIYA-MTDGGRGV-LGSVSQDGQVHQRLAAREGEVREPAW 424


>gi|207728189|ref|YP_002256583.1| protein tolb precursor [Ralstonia solanacearum MolK2]
 gi|207744076|ref|YP_002260468.1| protein tolb precursor [Ralstonia solanacearum IPO1609]
 gi|206591434|emb|CAQ57046.1| protein tolb precursor [Ralstonia solanacearum MolK2]
 gi|206595480|emb|CAQ62407.1| protein tolb precursor [Ralstonia solanacearum IPO1609]
          Length = 432

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 194/419 (46%), Gaps = 20/419 (4%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
           HA + V  +    S   IA   F    +    ++ +V  DL RS  F+ +        + 
Sbjct: 28  HAQLNVEISGVGSSQYPIAVAHFQDEAQAPENITAIVRSDLARSGRFSNVD---VAGAVV 84

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
                P    W + GA  LV G V + G DR  + FRL+D    + + G          R
Sbjct: 85  PESPAPDLGAWKTRGAAALVGGTVTRSG-DRYEIRFRLYDTAKGESLGGLSLTRGEGQLR 143

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRD 211
             AH I+D IYQ + GE+G F +R+ +VS+     + ++  L + D DGAN +    S +
Sbjct: 144 LAAHEIADFIYQKLMGERGVFATRLSYVSK-----VGRHYQLQISDSDGANPQIALTSNE 198

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I+  P +SP+  KVAY +++    + VY+ D    R    + N +    AP +S +G+R
Sbjct: 199 PII-SPSWSPDGTKVAYVSFESRKPV-VYVHDLLTGRR-AVVSNQKGNNSAPAWSPDGRR 255

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +++ +D    IY V+   +   RLT +  I+   S+SPD   I F SDR G  Q+Y M
Sbjct: 256 VAVALSRDGNTQIYLVNADGSGLRRLTRSSAIDTEPSFSPDGRSIYFTSDRGGAPQVYRM 315

Query: 332 QSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
              G D    +R++  K      P  SP G L+A+    G  F + V          L +
Sbjct: 316 PVEGEDAGGAQRVTF-KGGYNTSPRISPDGKLLAYIARVGGAFKLYVQDLSNGDVTGLTD 374

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVGFM 446
            S  ++P+++ +G+ ++++ +  G   S L ++  +GR   +++  A    +P W  FM
Sbjct: 375 TSYDESPSFAANGKFILYATRVGGR--SVLAAVSTDGRTRQILSLQAGQVREPAWGPFM 431


>gi|167035189|ref|YP_001670420.1| translocation protein TolB [Pseudomonas putida GB-1]
 gi|166861677|gb|ABZ00085.1| Tol-Pal system beta propeller repeat protein TolB [Pseudomonas
           putida GB-1]
          Length = 423

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 208/421 (49%), Gaps = 22/421 (5%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF------NLISQDSFKQ 89
           + V + S   +P+++          L   +++++  DL+ S  +      N+ISQ S   
Sbjct: 16  ILVTSGSDRATPIAVVPFGLQGGSVLPEDIADIIGNDLRNSGYYSPIPRQNMISQPSQAS 75

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
           ++        F+DW +LGAQ ++ G ++  G  RL+V++ L++V   +Q++      S  
Sbjct: 76  EVI-------FRDWKALGAQYVMVGSIVPSG-GRLQVQYALFNVATEQQVLTGSVAGSTD 127

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTP 208
             R +AH I+D  ++ +TG KG F++R+L+V+ E   +   + +L   D DGA    L  
Sbjct: 128 QLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSTNNTRYTLQRSDYDGARAVTLLQ 187

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           SR+ IL  PRF+P+ +++AY +++ +   R+++ +    R  +++ NF  +  AP +S +
Sbjct: 188 SREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFIQNIDTGRR-EQVTNFEGLNGAPAWSPD 244

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G R    + KD   DIY +++ S    R+T    IN    +  D + + F SDR GK Q+
Sbjct: 245 GSRLAFVLSKDGNPDIYVMNVASRQISRVTAGPGINTEPFWGKDGNTLYFTSDRGGKPQI 304

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV 387
           Y    +G   +R++     +    + + +  L+   +  G   F +          ++L 
Sbjct: 305 YKQSVSGGGAERVTFVGNYNANPKLSADEKTLVMIHRQQGFTNFKVAAQDLQRGSVKILS 364

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFM 446
           E S  ++PT +P+G  LI++ ++ G     L  + LNGR    + T      +P W  ++
Sbjct: 365 ETSLDESPTVAPNGTMLIYATRQQGR--GVLMLVSLNGRVRLPLPTAQGEVREPSWSPYL 422

Query: 447 D 447
           +
Sbjct: 423 N 423


>gi|90417116|ref|ZP_01225044.1| translocation protein TolB precursor [marine gamma proteobacterium
           HTCC2207]
 gi|90331132|gb|EAS46388.1| translocation protein TolB precursor [marine gamma proteobacterium
           HTCC2207]
          Length = 440

 Score =  149 bits (377), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 198/391 (50%), Gaps = 24/391 (6%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPR--FQDWNSLGAQVLVTG--RVIKEG 120
           +S +V  DL RS +F  + +   +  +  P S     ++DW  LGA+ LV G  R I EG
Sbjct: 64  ISAIVEADLARSGLFAPMER---RDMLAFPSSASEVYYRDWRLLGAEYLVAGNMRAISEG 120

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
             R ++EF L +V  +K ++  K   + +  R +AH ISD +Y+ ITG +G F++R+ +V
Sbjct: 121 --RYQIEFSLLNVSGQKTVLTHKVSGTSSQMRDLAHLISDKVYEEITGIRGAFSTRLAYV 178

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD--EDILR 238
           + + ++ +    L V D DGA  + +  S + I+  P +S N +++AY +++     I R
Sbjct: 179 TATRINDVYTYRLNVADADGAREKLVLESGEPIM-SPAWSANGKELAYVSFETGRPAIFR 237

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
             L+  + +    ++ NF  +  AP +S +GK+  + + KD   ++Y +DLQ+    RLT
Sbjct: 238 QNLVTAQRE----QLTNFTGLNGAPSWSPDGKKMALVLSKDGNPELYLLDLQTKKFSRLT 293

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSP 356
               I+   ++ PD   ++F SDR G  Q+Y +   S  +++   S +  A    P  +P
Sbjct: 294 RHFAIDTEPTWMPDGKHLLFTSDRGGTPQIYKLNIASKATERLTFSGNYNAR---PSLAP 350

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +A      + F I        +   L E    ++PT +P+G  L+++ K+ GD G 
Sbjct: 351 DGRTMAMVHRQRDTFHIASFDLKTGRMIELTETRLDESPTVAPNGAMLMYATKQ-GDRGV 409

Query: 417 KLYSIDLN-GRNETLINTPAYASDPQWVGFM 446
            L ++ L+ G    L ++     +P W  F+
Sbjct: 410 -LAAVSLDAGVRYVLPSSSGDVREPAWSPFL 439


>gi|86157087|ref|YP_463872.1| TolB-like protein [Anaeromyxobacter dehalogenans 2CP-C]
 gi|119371034|sp|Q2INP9|TOLB_ANADE RecName: Full=Protein tolB; Flags: Precursor
 gi|85773598|gb|ABC80435.1| TolB-like protein [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 434

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 195/406 (48%), Gaps = 24/406 (5%)

Query: 38  VATNSANYSPVSIAFTKFVSIDELGG---KVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
           +   S ++ P+ IA   F    + G    + +EVV  DL  S +F+++    F       
Sbjct: 28  IVVGSPDFRPLPIAVAAFQGEGDAGAAATQTAEVVRADLVLSGLFDVLDPRGFLADPAEG 87

Query: 95  DSIP--RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
            + P  RF  W  +GA  L   RV + G   L  E  L++V+  ++++ K      A  R
Sbjct: 88  FAAPSIRFARWADVGADGLAKARV-RRGPGGLEGELHLYEVRAGREVLVKLLRVDGADAR 146

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
            +AH ++D+I +  T E G F +RI     ++  G     L   D DG N + L   R  
Sbjct: 147 SLAHRMADEIVRYYTREPGIFATRI----AAIRRGRGTWELVTQDMDGGNQQVLLSER-S 201

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPRFSSNGKR 271
           IL  P + P+ +++   +Y      R  L   R  DRA + +G  R+      +S +G R
Sbjct: 202 ILMSPAWRPDGREILVTSYRSG---RPELWAYRFSDRAFRPLGRQRNA-FGGVYSPDGSR 257

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              +V +    D++ +    +   +LT+   I++S ++SPD  +I F SDR G  Q+YVM
Sbjct: 258 IAFTVSEGNVTDLWVMSADGSGARKLTSDPAIDVSPTWSPDGRRIAFVSDRSGTPQIYVM 317

Query: 332 QSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVED 389
            ++GS  +R++   + +Y   P WSP+GDLIAFT     K F + V+  D      + +D
Sbjct: 318 GADGSGARRLT--FQGNYNQTPQWSPRGDLIAFTARDERKVFDVFVVAPDSGAISRITQD 375

Query: 390 SNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                + P+W+P+GR +IF   ++G  G +L   D  G  +T + +
Sbjct: 376 QGRTNEEPSWAPNGRLMIFRTDRNG--GIQLVVSDARGDRQTPVTS 419


>gi|83746171|ref|ZP_00943225.1| TolB protein [Ralstonia solanacearum UW551]
 gi|83727137|gb|EAP74261.1| TolB protein [Ralstonia solanacearum UW551]
          Length = 434

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 194/419 (46%), Gaps = 20/419 (4%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
           HA + V  +    S   IA   F    +    ++ +V  DL RS  F+ +        + 
Sbjct: 30  HAQLNVEISGVGSSQYPIAVAHFQDEAQAPENITAIVRSDLARSGRFSNVD---VAGAVV 86

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
                P    W + GA  LV G V + G DR  + FRL+D    + + G          R
Sbjct: 87  PESPAPDLGAWKTRGAAALVGGTVTRSG-DRYEIRFRLYDTAKGESLGGLSLTRGEGQLR 145

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRD 211
             AH I+D IYQ + GE+G F +R+ +VS+     + ++  L + D DGAN +    S +
Sbjct: 146 LAAHEIADFIYQKLMGERGVFATRLSYVSK-----VGRHYQLQISDSDGANPQIALTSNE 200

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I+  P +SP+  KVAY +++    + VY+ D    R    + N +    AP +S +G+R
Sbjct: 201 PII-SPSWSPDGTKVAYVSFESRKPV-VYVHDLLTGRR-AVVSNQKGNNSAPAWSPDGRR 257

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +++ +D    IY V+   +   RLT +  I+   S+SPD   I F SDR G  Q+Y M
Sbjct: 258 VAVALSRDGNTQIYLVNADGSGLRRLTRSSAIDTEPSFSPDGRSIYFTSDRGGAPQVYRM 317

Query: 332 QSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
              G D    +R++  K      P  SP G L+A+    G  F + V          L +
Sbjct: 318 PVEGEDAGGAQRVTF-KGGYNTSPRISPDGKLLAYIARVGGAFKLYVQDLSNGDVTGLTD 376

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVGFM 446
            S  ++P+++ +G+ ++++ +  G   S L ++  +GR   +++  A    +P W  FM
Sbjct: 377 TSYDESPSFAANGKFILYATRVGGR--SVLAAVSTDGRTRQILSLQAGQVREPAWGPFM 433


>gi|332305764|ref|YP_004433615.1| Tol-Pal system beta propeller repeat protein TolB [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332173093|gb|AEE22347.1| Tol-Pal system beta propeller repeat protein TolB [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 451

 Score =  149 bits (377), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 214/456 (46%), Gaps = 39/456 (8%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L  L +++      S+   +    +SA   P+++   K+    ++   +SEV+S DL RS
Sbjct: 8   LTFLSLMLSASSQASLEIVITEGIDSAR--PIAVVPFKWNGPGQMPEALSEVISGDLLRS 65

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F+ I   S   +  + DS   ++ W + G + ++ G V  EG DR RV F L D   R
Sbjct: 66  GKFSPIDTASMPGQ-PHTDSELDYRAWAATGVEAILVGSVTPEGPDRYRVNFTLVDAI-R 123

Query: 137 KQIIGKKFFS---------------------SPASWRKIAHTISDDIYQSITGEKGDFNS 175
            QI G K  +                     +   +R+ AH ISD +Y+ +TGEKG F +
Sbjct: 124 GQITGGKAQALNNGQLTNSNDHILDSRQTVITGEGFRQYAHRISDVVYEKLTGEKGAFMT 183

Query: 176 RILFVSESVVSGIIKNS----LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           RI +V   VV     N+    L V D DG N   L  S++  L  P +SP+  K+AY T+
Sbjct: 184 RIAYV---VVRDRKTNAFPYQLVVADYDGVNETMLLRSKEP-LMSPSWSPDGTKLAYVTF 239

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           +++   ++Y+ D     +  ++ +F  +  AP FS NGK+  + + KD   +IY +D+ S
Sbjct: 240 ENKRS-QIYIQDL-YTMSRTQMTDFSGINSAPVFSPNGKQLAMVLSKDGNPEIYVMDIAS 297

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              ER+T    I+   S+SPD   ++F S+R GK Q+Y +    +  +R++ D E +   
Sbjct: 298 KRLERITRNRAIDTEPSWSPDGKSLIFSSERGGKPQIYRVDLASNSVRRVTFDGEMNLGG 357

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            + +P G  +     +   + I     +    ++L +    ++P+ +P+G  +I+S    
Sbjct: 358 TI-TPDGGRMVMVNRTRGNYNIAAQDLNNGNIQVLTKTYLDESPSIAPNGSMIIYSTLHQ 416

Query: 412 GDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           G     L S+D  GR    L  +      P W  F+
Sbjct: 417 GKQVLSLVSLD--GRFKARLPASDGQVKSPSWSPFL 450


>gi|148546494|ref|YP_001266596.1| translocation protein TolB [Pseudomonas putida F1]
 gi|148510552|gb|ABQ77412.1| Tol-Pal system beta propeller repeat, TolB [Pseudomonas putida F1]
 gi|313497574|gb|ADR58940.1| TolB [Pseudomonas putida BIRD-1]
          Length = 423

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 208/421 (49%), Gaps = 22/421 (5%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF------NLISQDSFKQ 89
           + V + S   +P+++          L   +++++  DL+ S  +      N+ISQ S   
Sbjct: 16  ILVTSGSDRATPIAVVPFGLQGGSVLPEDIADIIGNDLRNSGYYSPIPRQNMISQPSQAS 75

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
           ++        F+DW +LGAQ ++ G ++  G  RL+V++ L++V   +Q++      S  
Sbjct: 76  EVI-------FRDWKALGAQYVMVGSIVPSG-GRLQVQYALFNVATEQQVLTGSVAGSTD 127

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTP 208
             R +AH I+D  ++ +TG KG F++R+L+V+ E   +   + +L   D DGA    L  
Sbjct: 128 QLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSTNNTRYTLQRSDYDGARAVTLLQ 187

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           SR+ IL  PRF+P+ +++AY +++ +   R+++ +    R  +++ NF  +  AP +S +
Sbjct: 188 SREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFVQNIDTGRR-EQVTNFEGLNGAPAWSPD 244

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G R    + KD   DIY +++ S    R+T    IN    +  D + + F SDR GK Q+
Sbjct: 245 GSRLAFVLSKDGNPDIYVMNVASRQISRVTAGPGINTEPFWGKDGNTLYFTSDRGGKPQI 304

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV 387
           Y    +G   +R++     +    + + +  L+   +  G   F +          ++L 
Sbjct: 305 YKQSVSGGGAERVTFVGNYNANPKLSADEKTLVMIHRQQGFTNFKVAAQDLQRGSVKILS 364

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFM 446
           E S  ++PT +P+G  LI++ ++ G     L  + LNGR    + T      +P W  ++
Sbjct: 365 ETSLDESPTVAPNGTMLIYATRQQGR--GVLMLVSLNGRVRLPLPTAQGEVREPSWSPYL 422

Query: 447 D 447
           +
Sbjct: 423 N 423


>gi|257487004|ref|ZP_05641045.1| translocation protein TolB [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289626502|ref|ZP_06459456.1| translocation protein TolB [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289650948|ref|ZP_06482291.1| translocation protein TolB [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|298488203|ref|ZP_07006239.1| beta propeller repeat-containing TolB protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298157261|gb|EFH98345.1| beta propeller repeat-containing TolB protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320323046|gb|EFW79135.1| translocation protein TolB [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329682|gb|EFW85671.1| translocation protein TolB [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330868618|gb|EGH03327.1| translocation protein TolB [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330877973|gb|EGH12122.1| translocation protein TolB [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330892246|gb|EGH24907.1| translocation protein TolB [Pseudomonas syringae pv. mori str.
           301020]
 gi|330988975|gb|EGH87078.1| translocation protein TolB [Pseudomonas syringae pv. lachrymans
           str. M301315]
 gi|331009354|gb|EGH89410.1| translocation protein TolB [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 433

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 219/440 (49%), Gaps = 15/440 (3%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVK---VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           INL   L+++  F    + A  K   V + S   +P+++    +   + L   ++E+VS 
Sbjct: 2   INLFRGLLVVLCFASAMVSAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIVSN 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L+
Sbjct: 62  DLRNSGYYAPIPKQNMISLPTQASEV-IFRDWKALGAQYVMVGNITPAG-GRLQIQYALF 119

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIK 190
           +V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+ E       +
Sbjct: 120 NVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNTR 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L   D DGA    L  SR+ IL  PRF+P+ +++AY +++ +   R+++      R  
Sbjct: 180 YTLQRSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGRR- 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    + 
Sbjct: 237 EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFFG 296

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-E 369
            D S + F SDR GK Q+Y    NG   +R++     +    + + +  L+   +  G  
Sbjct: 297 KDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFT 356

Query: 370 KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            F + V        ++L  DSNL ++PT +P+G  +I++ ++ G     L  + +NGR  
Sbjct: 357 NFKVAVQDLARGSVKILT-DSNLDESPTVAPNGTMVIYATRQQGR--GVLMLVSINGRVR 413

Query: 429 TLINTP-AYASDPQWVGFMD 447
             + T      +P W  +++
Sbjct: 414 LPLPTAQGEVREPSWSPYLN 433


>gi|83647596|ref|YP_436031.1| translocation protein TolB [Hahella chejuensis KCTC 2396]
 gi|119371045|sp|Q2SCL8|TOLB_HAHCH RecName: Full=Protein tolB; Flags: Precursor
 gi|83635639|gb|ABC31606.1| Periplasmic component of the Tol biopolymer transport system
           [Hahella chejuensis KCTC 2396]
          Length = 430

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 218/430 (50%), Gaps = 13/430 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF 79
           L++LI G     +   +++   S    PV++      S   L   + ++ ++DL+RS   
Sbjct: 9   LILLISGLARADL--VIEIDKGSRAAIPVAVVPFANESGQPLAEDIGQIFTEDLKRSGDI 66

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL-RVEFRLWDVKDRKQ 138
             + +       +  + I  F+DW  LG + L+ G V  +   ++ +V + L++V+ +++
Sbjct: 67  EPLDRTKMVSIPSKAEEI-YFRDWGLLGQRYLLVGGVQYDAPSQVYKVRYELYNVQSQQR 125

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           +IGK         R + H I+D +Y+++TG +G F++RI +V+           L V D 
Sbjct: 126 VIGKIISGKSEKLRDMGHAIADAVYEAVTGIRGVFSTRIAYVTLEKSGAKNIYRLEVADA 185

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFR 257
           DG     L   R   +  P +SP+ +K+AY +++ +    +Y+ D  +D   + ++ +F+
Sbjct: 186 DGRRSTELL-KRSMPIISPAWSPDGKKLAYVSFESQRPA-IYVQD--VDTGTRTQVTSFK 241

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            +  AP +S +G +  +++ KD   ++Y +DL++N+ +RLTN   I+  AS+SPD   I 
Sbjct: 242 GLNSAPTWSPDGTKLAVTLSKDGNAELYVLDLRNNSLKRLTNHWAIDTEASWSPDGRTIA 301

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIGVM 376
           F SDR G  Q+Y++ ++G   +R++   E  Y   P +S  G  + +       F +  +
Sbjct: 302 FTSDRGGGPQIYLVDASGGSPRRLT--FEGRYNSRPRFSVDGKKVYYVHQRDGSFNVASL 359

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             +  Q+++L +    ++P+ +P+G  +I++ +K+G     +  ++ +G   TL      
Sbjct: 360 DLESGQDQILTQTEMDESPSVAPNGSMIIYATQKNGKGVLAVVGVN-SGSKYTLPAQFGD 418

Query: 437 ASDPQWVGFM 446
             +P W  ++
Sbjct: 419 VREPAWSPYI 428


>gi|327481491|gb|AEA84801.1| translocation protein TolB [Pseudomonas stutzeri DSM 4166]
          Length = 433

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 208/436 (47%), Gaps = 18/436 (4%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKV-----SEVVSKDLQ 74
           LLVL+      ++     +   S     + IA   F      GG V     +E++  D++
Sbjct: 8   LLVLLCCLAGIAVAQEKNIVVTSGADRAIPIAVVPF---GWQGGTVLPEDMAEIIGNDMR 64

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            + +F  I + +     T    I  ++DW +LGAQ ++ G +   G  RL+  + +++V 
Sbjct: 65  NTGIFQPIPRQNMISMPTRGSEI-IYRDWKALGAQYVMVGNIEPAG-GRLQARYEVFNVT 122

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI-IKNSL 193
             +Q++      SP   R +AH  +D  ++ +TG KG F++R+L+V+   + G   + +L
Sbjct: 123 TEQQVMSGTVGGSPDQLRDMAHHAADQSFEKLTGIKGAFSTRLLYVTAERMGGANTRYTL 182

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
              D DGA    L  SR+ IL  PR+SP+ +++AY +++ +   R+++      R  ++I
Sbjct: 183 QRSDYDGARAVTLLQSREPIL-SPRYSPDGRRIAYVSFEQKRP-RIFVQHIDTGRR-EQI 239

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            NF  +  AP FS +G R    + KD   +IY +DL S   +RLTN   I+    +  D 
Sbjct: 240 TNFEGLNGAPAFSPDGNRLAFVLSKDGNPEIYVMDLGSRQLQRLTNHYAIDTEPFWGADG 299

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFA 372
             I + SDR GK Q+Y  +   +  +R++     +    + + +  L+   +  G   F 
Sbjct: 300 QTIYYTSDRAGKPQIYKQRLGSNSAERVTFVGNYNANPKLSADEKTLVMIHRQDGYTNFK 359

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +          R+L + S  ++PT +P+G  LI++ ++ G     L  + +NGR    + 
Sbjct: 360 VAAQDLQRGNLRILSDTSLDESPTVAPNGTMLIYATRQQGR--GVLMLVSINGRVRLPLP 417

Query: 433 TP-AYASDPQWVGFMD 447
           T      +P W  +++
Sbjct: 418 TAQGEVREPSWSPYLN 433


>gi|197121110|ref|YP_002133061.1| TolB domain protein [Anaeromyxobacter sp. K]
 gi|226705865|sp|B4UDE1|TOLB_ANASK RecName: Full=Protein tolB; Flags: Precursor
 gi|196170959|gb|ACG71932.1| TolB domain protein [Anaeromyxobacter sp. K]
          Length = 434

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 195/406 (48%), Gaps = 24/406 (5%)

Query: 38  VATNSANYSPVSIAFTKFVSIDELG---GKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
           +   S ++ P+ IA   F    + G    + +EVV  DL  S +F+++    F    +  
Sbjct: 28  IVVGSPDFRPLPIAVAAFQGEGDAGVAATQTAEVVRADLVLSGLFDVLDPRGFLADPSEG 87

Query: 95  DSIP--RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
            + P  RF  W  +GA  L   RV + G   L  E  L++V+  ++++ K      A  R
Sbjct: 88  FAAPSIRFARWADVGADGLAKARV-RRGPAGLEGELHLYEVRAGREVLVKLLRVDGADAR 146

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
            +AH ++D+I +  T E G F +RI     ++  G     L   D DG N + L   R  
Sbjct: 147 SLAHRMADEIVRYYTREPGIFATRI----AAIRRGRGTWELVTQDMDGGNQQVLLSER-S 201

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPRFSSNGKR 271
           IL  P + P+ +++   +Y      R  L   R  DRA + +G  R+      +S +G R
Sbjct: 202 ILMSPAWRPDGREILVTSYRSG---RPELWAYRFSDRAFRPLGRHRNA-FGGVYSPDGSR 257

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              +V +    D++ +        +LT+   I++S ++SPD  +I F SDR G  Q+YVM
Sbjct: 258 IAFTVSEGNVTDLWVMSADGVGARKLTSDPAIDVSPTWSPDGRRIAFVSDRSGTPQIYVM 317

Query: 332 QSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVED 389
            ++GS  +R++   + +Y   P WSP+GDLIAFT     K F + V+  D      + +D
Sbjct: 318 GADGSGARRLT--FQGNYNQTPQWSPRGDLIAFTARDERKVFDVFVVSPDSGAINRITQD 375

Query: 390 SNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                + P+W+P+GR +IF   ++G  G +L   D  G  +T + +
Sbjct: 376 QGRTNEEPSWAPNGRLMIFRTDRNG--GIQLVVSDARGDRQTPVTS 419


>gi|301384814|ref|ZP_07233232.1| translocation protein TolB [Pseudomonas syringae pv. tomato Max13]
 gi|302063532|ref|ZP_07255073.1| translocation protein TolB [Pseudomonas syringae pv. tomato K40]
 gi|302130604|ref|ZP_07256594.1| translocation protein TolB [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|331016445|gb|EGH96501.1| translocation protein TolB [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 433

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 219/440 (49%), Gaps = 15/440 (3%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVK---VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           INL   L+++  F    + A  K   V + S   +P+++    +   + L   ++E+VS 
Sbjct: 2   INLFRGLLVVLCFASAMVAAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIVSN 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L+
Sbjct: 62  DLRNSGYYAPIPKQNMISLPTQASEV-IFRDWKALGAQYVMVGNITPAG-GRLQIQYALF 119

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIK 190
           +V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+ E       +
Sbjct: 120 NVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNTR 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L   D DGA    L  SR+ IL  PRF+P+ +++AY +++ +   R+++      R  
Sbjct: 180 YTLQRSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGRR- 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    + 
Sbjct: 237 EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFFG 296

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-E 369
            D S + F SDR GK Q+Y    NG   +R++     +    + + +  L+   +  G  
Sbjct: 297 KDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFT 356

Query: 370 KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            F + V        ++L  DSNL ++PT +P+G  +I++ ++ G     L  + +NGR  
Sbjct: 357 NFKVAVQDLARGSVKILT-DSNLDESPTVAPNGTMVIYATRQQGR--GVLMLVSINGRVR 413

Query: 429 TLINTP-AYASDPQWVGFMD 447
             + T      +P W  +++
Sbjct: 414 LPLPTAQGEVREPSWSPYLN 433


>gi|330811387|ref|YP_004355849.1| Colicin import protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379495|gb|AEA70845.1| Colicin import protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 433

 Score =  149 bits (375), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 206/415 (49%), Gaps = 10/415 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           + V + S   +P+++    +     L   ++E++  DL+ S  +  I + +     T   
Sbjct: 26  ILVTSGSDRATPIAVVPFGWQGGSVLPDDMAEIIGNDLRNSGYYAPIPKQNMISLPTQAS 85

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
            +  ++DW +LGAQ ++ G ++  G  RL+V++ L++V   +Q++      S    R ++
Sbjct: 86  EV-IYRDWKALGAQYIMVGSIVPAG-GRLQVQYALFNVATEQQVLTGSVSGSVDQLRDMS 143

Query: 156 HTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           H I+D  ++ +TG KG F++R+L+V+ E       + +L   D DGA    L  SR+ IL
Sbjct: 144 HYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNTRYTLQRSDYDGARAVTLLQSREPIL 203

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             PRF+P+ +++AY +++ +   R+++      R  ++I NF  +  AP +S +G R   
Sbjct: 204 -SPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGRR-EQITNFEGLNGAPAWSPDGSRLAF 260

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + KD   DIY ++L S +  R+TN   IN    +  D S I F SDR GK Q+Y   + 
Sbjct: 261 VLSKDGNPDIYVMNLASRSISRVTNGPGINTEPFWGKDGSTIYFTSDRGGKPQIYKTSAG 320

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQ 393
           G   +R++     +    + + +  L+   +  G   F +          ++L + +  +
Sbjct: 321 GGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFTNFKVAAQDLQRGSVKILTDSTLDE 380

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFMD 447
           +PT +P+G  +I++ ++ G     L  + +NGR    + T      +P W  +++
Sbjct: 381 SPTVAPNGTMVIYATRQQGR--GVLMLVSINGRVRLPLPTAQGEVREPSWSPYLN 433


>gi|302187151|ref|ZP_07263824.1| translocation protein TolB [Pseudomonas syringae pv. syringae 642]
 gi|330936711|gb|EGH40899.1| translocation protein TolB [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330950602|gb|EGH50862.1| translocation protein TolB [Pseudomonas syringae Cit 7]
          Length = 433

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 219/440 (49%), Gaps = 15/440 (3%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVK---VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           INL   L+++  F    + A  K   V + S   +P+++    +   + L   ++E++S 
Sbjct: 2   INLFRGLLVVLCFASAMVSAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIISN 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L+
Sbjct: 62  DLRNSGYYAPIPKQNMISLPTQASEV-IFRDWKALGAQYVMVGNITPAG-GRLQIQYALF 119

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIK 190
           +V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+ E       +
Sbjct: 120 NVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNTR 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L   D DGA    L  SR+ IL  PRF+P+ +++AY +++ +   R+++      R  
Sbjct: 180 YTLQRSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGRR- 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    + 
Sbjct: 237 EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFFG 296

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-E 369
            D S + F SDR GK Q+Y    NG   +R++     +    + + +  L+   +  G  
Sbjct: 297 KDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFT 356

Query: 370 KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            F + V        ++L  DSNL ++PT +P+G  +I++ ++ G     L  + +NGR  
Sbjct: 357 NFKVAVQDLARGSVKILT-DSNLDESPTVAPNGTMVIYATRQQGR--GVLMLVSINGRVR 413

Query: 429 TLINTP-AYASDPQWVGFMD 447
             + T      +P W  +++
Sbjct: 414 LPLPTAQGEVREPSWSPYLN 433


>gi|330872647|gb|EGH06796.1| translocation protein TolB [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 433

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 219/440 (49%), Gaps = 15/440 (3%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVK---VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           INL   L+++  F    + A  K   V + S   +P+++    +   + L   ++E++S 
Sbjct: 2   INLFRGLLVVLCFASGMVAAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIISN 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L+
Sbjct: 62  DLRNSGYYAPIPKQNMISLPTQASEV-IFRDWKALGAQYVMVGNITPAG-GRLQIQYALF 119

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIK 190
           +V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+ E       +
Sbjct: 120 NVATEQQVLNGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNTR 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L   D DGA    L  SR+ IL  PRF+P+ +++AY +++ +   R+++      R  
Sbjct: 180 YTLQRSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGRR- 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    + 
Sbjct: 237 EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFFG 296

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-E 369
            D S + F SDR GK Q+Y    NG   +R++     +    + + +  L+   +  G  
Sbjct: 297 KDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFT 356

Query: 370 KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            F + V        ++L  DSNL ++PT +P+G  +I++ ++ G     L  + +NGR  
Sbjct: 357 NFKVAVQDLARGSVKILT-DSNLDESPTVAPNGTMVIYATRQQGR--GVLMLVSINGRVR 413

Query: 429 TLINTP-AYASDPQWVGFMD 447
             + T      +P W  +++
Sbjct: 414 LPLPTAQGEVREPSWSPYLN 433


>gi|28871117|ref|NP_793736.1| tolB protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|32699697|sp|Q87Y40|TOLB_PSESM RecName: Full=Protein tolB; Flags: Precursor
 gi|28854367|gb|AAO57431.1| tolB protein [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 433

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 219/440 (49%), Gaps = 15/440 (3%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVK---VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           INL   L+++  F    + A  K   V + S   +P+++    +   + L   ++E++S 
Sbjct: 2   INLFRGLLVVLCFASAMVAAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIISN 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L+
Sbjct: 62  DLRNSGYYAPIPKQNMISLPTQASEV-IFRDWKALGAQYVMVGNITPAG-GRLQIQYALF 119

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIK 190
           +V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+ E       +
Sbjct: 120 NVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNTR 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L   D DGA    L  SR+ IL  PRF+P+ +++AY +++ +   R+++      R  
Sbjct: 180 YTLQRSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGRR- 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    + 
Sbjct: 237 EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFFG 296

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-E 369
            D S + F SDR GK Q+Y    NG   +R++     +    + + +  L+   +  G  
Sbjct: 297 KDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFT 356

Query: 370 KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            F + V        ++L  DSNL ++PT +P+G  +I++ ++ G     L  + +NGR  
Sbjct: 357 NFKVAVQDLARGSVKILT-DSNLDESPTVAPNGTMVIYATRQQGR--GVLMLVSINGRVR 413

Query: 429 TLINTP-AYASDPQWVGFMD 447
             + T      +P W  +++
Sbjct: 414 LPLPTAQGEVREPSWSPYLN 433


>gi|104783067|ref|YP_609565.1| translocation protein TolB [Pseudomonas entomophila L48]
 gi|122402282|sp|Q1I6F4|TOLB_PSEE4 RecName: Full=Protein tolB; Flags: Precursor
 gi|95112054|emb|CAK16781.1| TolB protein precursor [Pseudomonas entomophila L48]
          Length = 433

 Score =  148 bits (373), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 209/435 (48%), Gaps = 11/435 (2%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
            L +LL  + G    +    + V + S   +P+++          L   +++++S DL+ 
Sbjct: 7   GLLVLLCCVAGM-AMAEEKNILVTSGSDRATPIAVVPFGVQGGSVLPEDMADIISNDLRN 65

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  +  I + +     T    +  F+DW +LGAQ ++ G ++  G  RL+V + L++V  
Sbjct: 66  SGYYGPIPRQNMISLPTQASEV-IFRDWKALGAQYVMVGSIVPSG-GRLQVSYALFNVAT 123

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLC 194
            +Q++           R +AH I+D  ++ +TG KG F++R+L+V+ E   +   + +L 
Sbjct: 124 EQQVLTGSVAGGVDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSTNNTRYTLQ 183

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
             D DGA    L  SR+ IL  PRF+P+ +++AY +++ +   R+++      R  ++I 
Sbjct: 184 RSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFIQHIDTGRR-EQIT 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           NF  +  AP +S +G R    + KD   DIY +++ S    R+T    IN    +  D +
Sbjct: 241 NFEGLNGAPAWSPDGTRLAFVLSKDGNPDIYVMNVASRQITRVTAGPGINTEPFWGKDGN 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAI 373
            + F SDR GK Q+Y     G   +R++     +    + + +  L+   +  G   F +
Sbjct: 301 TLYFTSDRGGKPQIYKQSVGGGGAERVTFVGNYNANPKLSADEKTLVMIHRQQGFTNFKV 360

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                     ++L E S  ++PT +P+G  LI++ ++ G     L  + LNGR    + T
Sbjct: 361 AAQDLQRGSVKILTETSLDESPTVAPNGTMLIYATRQQGR--GVLMLVSLNGRVRLPLPT 418

Query: 434 P-AYASDPQWVGFMD 447
                 +P W  +++
Sbjct: 419 AQGEVREPSWSPYLN 433


>gi|330964830|gb|EGH65090.1| translocation protein TolB [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 433

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 219/440 (49%), Gaps = 15/440 (3%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVK---VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           INL   L+++  F    + A  K   V + S   +P+++    +   + L   ++E++S 
Sbjct: 2   INLFRGLLVVLCFASGMVAAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIISN 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L+
Sbjct: 62  DLRNSGYYAPIPKQNMISLPTQASEV-IFRDWKALGAQYVMVGNITPAG-GRLQIQYALF 119

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIK 190
           +V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+ E       +
Sbjct: 120 NVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNTR 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L   D DGA    L  SR+ IL  PRF+P+ +++AY +++ +   R+++      R  
Sbjct: 180 YTLQRSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGRR- 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    + 
Sbjct: 237 EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFFG 296

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-E 369
            D S + F SDR GK Q+Y    NG   +R++     +    + + +  L+   +  G  
Sbjct: 297 KDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFT 356

Query: 370 KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            F + V        ++L  DSNL ++PT +P+G  +I++ ++ G     L  + +NGR  
Sbjct: 357 NFKVAVQDLARGSVKILT-DSNLDESPTVAPNGTMVIYATRQQGR--GVLMLVSINGRVR 413

Query: 429 TLINTP-AYASDPQWVGFMD 447
             + T      +P W  +++
Sbjct: 414 LPLPTAQGEVREPSWSPYLN 433


>gi|66044663|ref|YP_234504.1| translocation protein TolB [Pseudomonas syringae pv. syringae
           B728a]
 gi|75502949|sp|Q4ZWK6|TOLB_PSEU2 RecName: Full=Protein tolB; Flags: Precursor
 gi|63255370|gb|AAY36466.1| TolB, N-terminal:TolB, N-terminal [Pseudomonas syringae pv.
           syringae B728a]
 gi|330968885|gb|EGH68951.1| translocation protein TolB [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 433

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 218/440 (49%), Gaps = 15/440 (3%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVK---VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           INL   L+++  F    + A  K   V + S   +P+++    +     L   ++E++S 
Sbjct: 2   INLFRGLLVVLCFASAMVSAEEKNILVTSGSDRAAPIAVVPFGWQGGSVLPEDMAEIISN 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L+
Sbjct: 62  DLRNSGYYAPIPKQNMISLPTQASEV-IFRDWKALGAQYVMVGNITPAG-GRLQIQYALF 119

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIK 190
           +V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+ E       +
Sbjct: 120 NVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNTR 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L   D DGA    L  SR+ IL  PRF+P+ +++AY +++ +   R+++      R  
Sbjct: 180 YTLQRSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGRR- 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    + 
Sbjct: 237 EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFFG 296

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-E 369
            D S + F SDR GK Q+Y    NG   +R++     +    + + +  L+   +  G  
Sbjct: 297 KDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFT 356

Query: 370 KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            F + V        ++L  DSNL ++PT +P+G  +I++ ++ G     L  + +NGR  
Sbjct: 357 NFKVAVQDLARGSVKILT-DSNLDESPTVAPNGTMVIYATRQQGR--GVLMLVSINGRVR 413

Query: 429 TLINTP-AYASDPQWVGFMD 447
             + T      +P W  +++
Sbjct: 414 LPLPTAQGEVREPSWSPYLN 433


>gi|146283138|ref|YP_001173291.1| translocation protein TolB [Pseudomonas stutzeri A1501]
 gi|145571343|gb|ABP80449.1| TolB protein [Pseudomonas stutzeri A1501]
          Length = 384

 Score =  147 bits (372), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 193/386 (50%), Gaps = 10/386 (2%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           ++E++  D++ + +F  I + +     T    I  ++DW +LGAQ ++ G +   G  RL
Sbjct: 6   MAEIIGNDMRNTGIFQPIPRQNMISMPTRGSEI-IYRDWKALGAQYVMVGNIEPAG-GRL 63

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           +  + +++V   +Q++      SP   R +AH  +D  ++ +TG KG F++R+L+V+   
Sbjct: 64  QARYEVFNVTTEQQVMSGTVGGSPDQLRDMAHHAADQSFEKLTGIKGAFSTRLLYVTAER 123

Query: 185 VSGI-IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           + G   + +L   D DGA    L  SR+ IL  PR+SP+ +++AY +++ +   R+++  
Sbjct: 124 MGGANTRYTLQRSDYDGARAVTLLQSREPIL-SPRYSPDGRRIAYVSFEQKRP-RIFVQH 181

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R  ++I NF  +  AP FS +G R    + KD   +IY +DL S   +RLTN   I
Sbjct: 182 IDTGRR-EQITNFEGLNGAPAFSPDGNRLAFVLSKDGNPEIYVMDLGSRQLQRLTNHYAI 240

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +    +  D   I + SDR GK Q+Y  +   +  +R++     +    + + +  L+  
Sbjct: 241 DTEPFWGADGQTIYYTSDRAGKPQVYKQRLGSNSAERVTFVGNYNANPKLSADEKTLVMI 300

Query: 364 TKFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +  G   F +          R+L + S  ++PT +P+G  LI++ ++ G     L  + 
Sbjct: 301 HRQDGYTNFKVAAQDLQRGNLRILSDTSLDESPTVAPNGTMLIYATRQQGR--GVLMLVS 358

Query: 423 LNGRNETLINTP-AYASDPQWVGFMD 447
           +NGR    + T      +P W  +++
Sbjct: 359 INGRVRLPLPTAQGEVREPSWSPYLN 384


>gi|237800226|ref|ZP_04588687.1| translocation protein TolB [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|237806414|ref|ZP_04593118.1| translocation protein TolB [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331023083|gb|EGI03140.1| translocation protein TolB [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331027527|gb|EGI07582.1| translocation protein TolB [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 433

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 220/443 (49%), Gaps = 21/443 (4%)

Query: 15  INL--CLLLVLIGGFFPTSIHAF----VKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           INL   LL+VL    F + I A     + V + S   +P+++    +     L   ++E+
Sbjct: 2   INLFRGLLVVLC---FASGIVAAEEKNILVTSGSDRAAPIAVVPFGWQGGSVLPEDMAEI 58

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           VS DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++
Sbjct: 59  VSNDLRNSGYYAPIPKQNMISLPTQGSEV-IFRDWKALGAQYVMVGNITPAG-GRLQIQY 116

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSG 187
            L++V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+ E     
Sbjct: 117 ALFNVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSEN 176

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             + +L   D DGA    L  SR+ IL  PRF+P+ +++AY +++ +   R+++      
Sbjct: 177 NTRYTLQRSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTG 234

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R  ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+   
Sbjct: 235 RR-EQITNFEGLNGAPAWSPDGNKLAFVLSKDGNPEIYVINLASRQLSRVTNDGAIDTEP 293

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +  D S + F SDR GK Q+Y    NG   +R++     +    + + +  L+   +  
Sbjct: 294 FFGKDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNANPKLSADEKTLVMIHRQD 353

Query: 368 G-EKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G   F + V        ++L  DSNL ++PT +P+G  +I++ ++ G     L  + +NG
Sbjct: 354 GFTNFKVAVQDLARGSVKILT-DSNLDESPTVAPNGTMVIYATRQQGR--GVLMLVSING 410

Query: 426 RNETLINTP-AYASDPQWVGFMD 447
           R    + T      +P W  +++
Sbjct: 411 RVRLPLPTAQGEVREPSWSPYLN 433


>gi|153003575|ref|YP_001377900.1| TolB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152027148|gb|ABS24916.1| TolB domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 437

 Score =  147 bits (371), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 192/381 (50%), Gaps = 21/381 (5%)

Query: 41  NSANYSPVSIAFTKFVS--IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP 98
            S ++ P+ IA  +F     D     V+EVV  DL  S +F+++    F    +   + P
Sbjct: 33  GSPSFQPLPIAVAQFQGEGGDARAAGVTEVVRGDLSLSGLFDVLDPRGFLADPSEGWAAP 92

Query: 99  --RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
             RF  W+ +GA+ LV  R+ + G D L  E  L++V+  ++++ K+  ++ +  R + H
Sbjct: 93  TIRFARWSDVGAEGLVKARMRQAG-DELEAELHLYEVRAGREVLVKRLRAAASDPRALGH 151

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            ISD+I +  T E G F+++++ + +  + G  +  L + D DG N R L   R  IL  
Sbjct: 152 RISDEIVRYYTREPGIFSTKLVAIRK--LRGHWE--LVMFDVDGKNPRVLLSER-TILLA 206

Query: 217 PRFSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P + P+ + V   +Y      L +Y +  R  R    I N    +    +S +G R   +
Sbjct: 207 PCWRPDGRAVLLTSYRSGRPELWLYTLADRGFRRLAAIPNAYGGV----YSPDGTRVAFT 262

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +      D++ ++      +RLT    +++S S+SPD +++ F SDR G  Q+Y+M ++G
Sbjct: 263 ITDRANSDVWVMNADGTGAKRLTREPALDLSPSWSPDGTRLAFVSDRSGTPQIYLMGADG 322

Query: 336 SDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVEDSNL- 392
           S  +R++   + +Y   P WSP+GD IAFT     K F + V+  +  + + + +D    
Sbjct: 323 SSPRRLT--FQGNYNQTPAWSPRGDAIAFTARDERKVFDVFVVSPENGKIQRVTQDQGRT 380

Query: 393 -QAPTWSPSGRSLIFSRKKDG 412
            + PTW+P+GR +     + G
Sbjct: 381 NEEPTWAPNGRLMALKTDRAG 401


>gi|109899246|ref|YP_662501.1| TolB-like [Pseudoalteromonas atlantica T6c]
 gi|123360547|sp|Q15RP1|TOLB_PSEA6 RecName: Full=Protein tolB; Flags: Precursor
 gi|109701527|gb|ABG41447.1| TolB-like protein [Pseudoalteromonas atlantica T6c]
          Length = 451

 Score =  147 bits (371), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 212/456 (46%), Gaps = 39/456 (8%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L  L V++      S+   +    +SA   P++I   K+    ++   +SEVVS DL RS
Sbjct: 8   LTFLSVVLTASSQASLEIVITEGIDSAR--PIAIVPFKWNGPGQMPESLSEVVSGDLLRS 65

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F+ I       +  N + +  +  W + G + ++ G V  EG DR RV F L D   R
Sbjct: 66  GKFSPIDSTDMPGQPHNDNEL-DYSAWAATGVEAILVGSVTPEGPDRYRVNFTLVDAI-R 123

Query: 137 KQIIG---------------------KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            QI G                     ++   +   +R+ AH ISD +Y+ +TGEKG F +
Sbjct: 124 GQITGGNARALSGGKLTNSNDHILDSRQTVITGQGFRQYAHRISDVVYEKLTGEKGAFMT 183

Query: 176 RILFVSESVVSGIIKNS----LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           RI +V   VV     N     L V D DG N   L  S++  L  P +SP+  K+AY T+
Sbjct: 184 RIAYV---VVRDRKTNEFPYQLVVADYDGVNETMLLRSKEP-LMSPSWSPDGTKLAYVTF 239

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           +++   ++Y+ D     +  ++ +F  +  AP FS NG++  + + KD   +IY +D+ S
Sbjct: 240 ENKRS-QIYIQDL-YTMSRTQMTDFPGINSAPVFSPNGRQLAMVLSKDGNPEIYVMDVAS 297

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              ER+T    I+   S++PD   ++F S+R GK Q+Y +    ++ +R++ D E +   
Sbjct: 298 KRLERITRNRAIDTEPSWTPDGKSLIFSSERGGKPQIYRVDLASNNVRRVTFDGEMNLGG 357

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            + +P G  +     +   + I     +    ++L +    ++P+ +P+G  +I+S    
Sbjct: 358 TI-TPDGGRMVMVNRTRGNYHIAAQDLENGNIQVLTKTYLDESPSIAPNGSMIIYSTLHQ 416

Query: 412 GDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           G     L S+D  GR    L  +      P W  F+
Sbjct: 417 GKQVLSLVSLD--GRFKARLPASDGQVKSPSWSPFL 450


>gi|303256190|ref|ZP_07342206.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderiales
           bacterium 1_1_47]
 gi|331001246|ref|ZP_08324872.1| Tol-Pal system beta propeller repeat protein TolB [Parasutterella
           excrementihominis YIT 11859]
 gi|302860919|gb|EFL83994.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderiales
           bacterium 1_1_47]
 gi|329568973|gb|EGG50769.1| Tol-Pal system beta propeller repeat protein TolB [Parasutterella
           excrementihominis YIT 11859]
          Length = 437

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 196/427 (45%), Gaps = 18/427 (4%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
            + L  I    P     FV +    AN  P  IA   F    E    ++E++  DL RS 
Sbjct: 22  AVGLAGIAAAEPAFAQLFVNIQGVGANQFP--IAIQPFFGNSEAPENIAEIIGNDLVRSG 79

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F L+S D+     T  D  P ++  ++ G      G V +    R  ++FRL+D   ++
Sbjct: 80  FFRLVSCDA----ATALDKDPDWKALSTAGVGAFADGSVTRAADGRYEIKFRLFDPVKKQ 135

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           +     + S     R  AH I+D I++ +TGEKGDF +RI +VS+    G    ++ V D
Sbjct: 136 ETDEASYISPKDDLRLYAHKIADRIFERLTGEKGDFATRIAYVSQ---QGKNNYAIMVAD 192

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG N +     R  I+    +SPN +++AY +++      V++ D    +  +++  FR
Sbjct: 193 SDGYNPQVALRIRHPII-SIDWSPNGRQIAYTSFETGKPT-VWIHDLSTGKR-RQVAAFR 249

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               AP FS +G    +++ KD    IY +D+      + T    I+   ++SPD   I 
Sbjct: 250 GNNSAPAFSPDGGTLAVALSKDGGTKIYLLDVNGQNLRQFTTGSSIDTEPAFSPDGKYIY 309

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SDR G  Q+Y     G   +RIS    A    P  SP+ D +A+   +G  F +  ++
Sbjct: 310 FTSDRGGNPQIYRKPVVGGSAERISFG-NAYAISPAVSPKNDQVAYIVRTGGHFKL--VQ 366

Query: 378 KDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +D +   +  L E    ++P++SP+G  +I++ +  G       S D + R+  L  T  
Sbjct: 367 QDLATGNVIPLSEIGKNESPSYSPNGNMIIYASEVGGKGVLSTVSTDGSTRSR-LSGTSG 425

Query: 436 YASDPQW 442
              +P W
Sbjct: 426 DIREPSW 432


>gi|114330316|ref|YP_746538.1| translocation protein TolB [Nitrosomonas eutropha C91]
 gi|114307330|gb|ABI58573.1| TolB, N-terminal domain protein [Nitrosomonas eutropha C91]
          Length = 423

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 190/378 (50%), Gaps = 17/378 (4%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           +++    AN  P+++A   F     L   +S +VS DL+RS +F L+  D        P 
Sbjct: 26  IEIFGGGANRMPIAVA--PFNGEKGLPQDISAIVSADLERSGIFKLV--DPLGLTSQEPV 81

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
           S   + DW   GA  LV G        R+ ++FRL DV  + Q+ G     +    R  A
Sbjct: 82  S---YVDWLGRGASALVIGSTSMLPDGRVDIQFRLLDVAKQVQLTGFSGTVTIEQLRAFA 138

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H I+D +Y+++T E G F++RI FV +       + +L V D DG N R L    + I+ 
Sbjct: 139 HRIADIVYEALTNEPGVFSTRIAFVRKQGS----RYALQVSDYDGFNARSLIEYTEPII- 193

Query: 216 EPRFSPNQQKVAYATYDDED-ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            P +SP+  K+AY +++ +  ++ V  + TR +R  K + NF+    AP +S +G +  +
Sbjct: 194 SPAWSPDGSKIAYTSFEKKKPVVYVQALATR-ER--KVVANFKGSNSAPAWSPDGGKLAV 250

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +       IY ++   +  +R++ +  I+   S+SPD   ++F SDR G  Q+Y M  +
Sbjct: 251 VLTLHGGSQIYLINADGSGLQRISQSPGIDTEPSFSPDGKWLIFTSDRGGSPQIYRMPVS 310

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G   +R++ + + +   P +S  G    +   +  +F++ V      Q +LL + S  ++
Sbjct: 311 GGAAERLTFEGDYN-VSPRYSSDGKRFVYIHRNSGRFSVAVQDLSTRQMQLLTDSSFDES 369

Query: 395 PTWSPSGRSLIFSRKKDG 412
           P++SP+ R ++++ +  G
Sbjct: 370 PSFSPNSRMVLYTTEVSG 387



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 85/164 (51%), Gaps = 5/164 (3%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + +++ DG+ ++ ++ S   I  EP FSP+ + + + T D     ++Y M      A +R
Sbjct: 260 IYLINADGSGLQRISQS-PGIDTEPSFSPDGKWLIF-TSDRGGSPQIYRMPVS-GGAAER 316

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +       ++PR+SS+GKR +   +      +   DL +   + LT++ F + S S+SP+
Sbjct: 317 LTFEGDYNVSPRYSSDGKRFVYIHRNSGRFSVAVQDLSTRQMQLLTDSSF-DESPSFSPN 375

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           S  +++ ++  G+  L ++ S+G  + R SQ+      + VW P
Sbjct: 376 SRMVLYTTEVSGRGILSIVSSDGQTRSRFSQEA-GDVREAVWGP 418



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 13/142 (9%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S++I F   +  +  L V   +G + + + +  E     P WSP G  IA+T F  +K  
Sbjct: 157 STRIAFVRKQGSRYALQVSDYDGFNARSLIEYTEP-IISPAWSPDGSKIAYTSFEKKKPV 215

Query: 373 IGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           + V +   ++ER +V +   +  AP WSP G  L       G  GS++Y I+ +G     
Sbjct: 216 VYV-QALATRERKVVANFKGSNSAPAWSPDGGKLAVVLTLHG--GSQIYLINADGSGLQR 272

Query: 431 INT-------PAYASDPQWVGF 445
           I+        P+++ D +W+ F
Sbjct: 273 ISQSPGIDTEPSFSPDGKWLIF 294


>gi|121998996|ref|YP_001003783.1| translocation protein TolB [Halorhodospira halophila SL1]
 gi|121590401|gb|ABM62981.1| TolB, N-terminal domain protein [Halorhodospira halophila SL1]
          Length = 436

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 190/365 (52%), Gaps = 11/365 (3%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           +++ +++ +L R+  F+++ ++         + + RF  W + G   LV G +   G  R
Sbjct: 59  ELAPIITANLARTGRFDILPEEDLVDTPGRMEDV-RFSTWRAQGVDHLVVGGIDDAGDGR 117

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-E 182
             V F + D    ++  G+++ +     R +AHTISD IY++IT  +G F  RI +V+ E
Sbjct: 118 YEVRFEVLDAFQGQRTDGRRYRAEERHLRTLAHTISDRIYETITDREGTFTKRIAYVAVE 177

Query: 183 SVVSGI-IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
               G   ++ L V D DG   + +  S D+ L  P +SP++ ++AY +++      V++
Sbjct: 178 QREDGEGRRHRLVVADSDGHRPQTILTS-DEPLLSPAWSPSRDRLAYVSFEGRR-SEVFV 235

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            + R     +R+ +FR +  AP +S +G +  +++ +D A +IY +D+ S     LT+  
Sbjct: 236 QEIRTGER-ERVASFRGINSAPAWSPDGDQLAVTLSRDGAANIYLIDVASGDVRPLTDHW 294

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I+  A++ PD   I F SDR G+ Q+Y    +GS+ +R++ D  A    P  SP G+ +
Sbjct: 295 AIDTEATWGPDGDWIYFTSDRGGRPQIYRTPPDGSETERVTYDG-AYNARPSISPDGERM 353

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYS 420
           A       ++ I +   D    +++ +    ++P+++P+G  +I++    GDT G +L +
Sbjct: 354 AMVHRHDGQYYIALQDLDTEAVQIISDGPADESPSFAPNGDLVIYTT---GDTEGQRLAT 410

Query: 421 IDLNG 425
             + G
Sbjct: 411 ASVIG 415


>gi|213969191|ref|ZP_03397330.1| translocation protein TolB [Pseudomonas syringae pv. tomato T1]
 gi|213926189|gb|EEB59745.1| translocation protein TolB [Pseudomonas syringae pv. tomato T1]
          Length = 416

 Score =  147 bits (370), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 209/416 (50%), Gaps = 12/416 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           + V + S   +P+++    +   + L   ++E+VS DL+ S  +  I + +     T   
Sbjct: 9   ILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIVSNDLRNSGYYAPIPKQNMISLPTQAS 68

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
            +  F+DW +LGAQ ++ G +   G  RL++++ L++V   +Q++      +    R +A
Sbjct: 69  EV-IFRDWKALGAQYVMVGNITPAG-GRLQIQYALFNVATEQQVLTGNVSGTNDQLRDMA 126

Query: 156 HTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           H I+D  ++ +TG KG F++R+L+V+ E       + +L   D DGA    L  SR+ IL
Sbjct: 127 HYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNTRYTLQRSDYDGARAVTLLQSREPIL 186

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             PRF+P+ +++AY +++ +   R+++      R  ++I NF  +  AP +S +G +   
Sbjct: 187 -SPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGRR-EQITNFEGLNGAPAWSPDGSKLAF 243

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + KD   +IY ++L S    R+TN   I+    +  D S + F SDR GK Q+Y    N
Sbjct: 244 VLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFFGKDGSTLYFTSDRGGKPQIYKTNIN 303

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNL- 392
           G   +R++     +    + + +  L+   +  G   F + V        ++L  DSNL 
Sbjct: 304 GGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFTNFKVAVQDLARGSVKILT-DSNLD 362

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFMD 447
           ++PT +P+G  +I++ ++ G     L  + +NGR    + T      +P W  +++
Sbjct: 363 ESPTVAPNGTMVIYATRQQGR--GVLMLVSINGRVRLPLPTAQGEVREPSWSPYLN 416


>gi|229160030|ref|ZP_04288034.1| WD40-like Beta Propeller [Bacillus cereus R309803]
 gi|228623467|gb|EEK80289.1| WD40-like Beta Propeller [Bacillus cereus R309803]
          Length = 298

 Score =  147 bits (370), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 142/256 (55%), Gaps = 8/256 (3%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + VM+ DG+N   +T + D   FEP +SP+ QK+A+++  D +I  +Y+M+         
Sbjct: 47  IYVMNPDGSNQTNITNNPDN-DFEPTWSPDGQKIAFSSIRDGNI-EIYVMNADGSNQ-TN 103

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I N  +  L P +S +G++   S  +D   +IY +++      RLTN    +   ++SPD
Sbjct: 104 ITNNPNDDLEPAWSPDGQKIAFSSFRDGNSEIYVMNVDGTNQTRLTNNPASDSKPTWSPD 163

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +I F S+R G  ++YVM +NGS+Q  I+ + +   F+P WSP G  IAFT    E   
Sbjct: 164 GQKIAFSSNRNGPLEIYVMNANGSNQTNITNNPDGD-FEPAWSPDGQKIAFTSVRNENLE 222

Query: 373 IGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           I V+  DGS Q RL     +   PTWSP G+ + FS  ++G+   ++Y ++ +G N+T I
Sbjct: 223 IYVINVDGSNQTRLTNSQGDNSLPTWSPDGQKIAFSSTRNGN--REIYVMNADGSNQTNI 280

Query: 432 -NTPAYASDPQWVGFM 446
            N PA  S+P W  FM
Sbjct: 281 TNNPAADSEPAWSPFM 296



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 104/208 (50%), Gaps = 19/208 (9%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           I+   K I + R ++++        +   S  +D   +IY ++   +    +TN    + 
Sbjct: 17  INMCCKTICSIRKVVIS--------KIAFSSNRDGNFEIYVMNPDGSNQTNITNNPDNDF 68

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++SPD  +I F S R+G  ++YVM ++GS+Q  I+ +      +P WSP G  IAF+ 
Sbjct: 69  EPTWSPDGQKIAFSSIRDGNIEIYVMNADGSNQTNITNNPNDD-LEPAWSPDGQKIAFSS 127

Query: 366 FSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           F      I VM  DG+ Q RL    ++   PTWSP G+ + FS  ++G    ++Y ++ N
Sbjct: 128 FRDGNSEIYVMNVDGTNQTRLTNNPASDSKPTWSPDGQKIAFSSNRNGPL--EIYVMNAN 185

Query: 425 GRNETLINT-------PAYASDPQWVGF 445
           G N+T I         PA++ D Q + F
Sbjct: 186 GSNQTNITNNPDGDFEPAWSPDGQKIAF 213


>gi|330959271|gb|EGH59531.1| translocation protein TolB [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 433

 Score =  146 bits (369), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 217/440 (49%), Gaps = 15/440 (3%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVK---VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           INL   L+++  F    + A  K   V + S   +P+++    +     L   ++E+VS 
Sbjct: 2   INLFRGLLVVLCFASGMVAAEEKNILVTSGSDRAAPIAVVPFGWQGGSVLPEDMAEIVSN 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L+
Sbjct: 62  DLRNSGYYAPIPKQNMISLPTQASEV-IFRDWKALGAQYVMVGNITPAG-GRLQIQYALF 119

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIK 190
           +V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+ E       +
Sbjct: 120 NVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSESNTR 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L   D DGA    L  SR+ IL  PRF+P+ +++AY +++     R+++      R  
Sbjct: 180 YTLQRSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQRRP-RIFVQHIDTGRR- 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    + 
Sbjct: 237 EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMNLASRQLSRVTNDSSIDTEPFFG 296

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-E 369
            D S + F SDR GK Q+Y    NG   +R++     +    + + +  L+   +  G  
Sbjct: 297 KDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFT 356

Query: 370 KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            F + V        ++L  DSNL ++PT +P+G  +I++ ++ G     L  + +NGR  
Sbjct: 357 NFKVAVQDLARGSVKILT-DSNLDESPTVAPNGTMVIYATRQQGR--GVLMLVSINGRVR 413

Query: 429 TLINTP-AYASDPQWVGFMD 447
             + T      +P W  +++
Sbjct: 414 LPLPTAQGEVREPSWSPYLN 433


>gi|15596169|ref|NP_249663.1| translocation protein TolB [Pseudomonas aeruginosa PAO1]
 gi|12644681|sp|P50601|TOLB_PSEAE RecName: Full=Protein tolB; Flags: Precursor
 gi|9946879|gb|AAG04361.1|AE004530_14 TolB protein [Pseudomonas aeruginosa PAO1]
 gi|5733837|gb|AAC44661.2| TolB [Pseudomonas aeruginosa]
          Length = 432

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 202/414 (48%), Gaps = 30/414 (7%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF------NLISQDSFKQKITNPDSIPRF 100
           P+++    F   + L   +S ++  DL+ S  F      N+ISQ +   ++        F
Sbjct: 36  PIAVVPFGFQGGNVLPEDMSNIIGNDLRNSGYFEPLPRQNMISQPAQASEVI-------F 88

Query: 101 QDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD 160
           +DW ++G   ++ G ++  G  RL+V++ L+DV   +Q++      S    R ++H I+D
Sbjct: 89  RDWKAVGVNYVMVGNIVPAGG-RLQVQYALFDVGTEQQVLTGSVTGSTDQLRDMSHYIAD 147

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR---DGANIRYLTPSRDQILFEP 217
             ++ +TG KG F++++L+V+    S  + N+   + R   DGA    L  SR+ I+  P
Sbjct: 148 QSFEKLTGIKGAFSTKMLYVTAERFS--VDNTRYTLQRSDYDGARPVTLLQSREPIV-SP 204

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           RFSP+ +++AY +++ +   R+++      R  ++I NF  +  AP FS +G R    + 
Sbjct: 205 RFSPDGRRIAYVSFEQKRP-RIFIQYVDTGRR-EQITNFEGLNGAPAFSPDGNRLAFVLS 262

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D   +IY +DL S A  RLTN L I+    +  D S + F SDR GK Q+Y M  N   
Sbjct: 263 RDGNPEIYVMDLGSRALRRLTNNLAIDTEPFWGKDGSTLYFTSDRGGKPQIYKMNVNSGA 322

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             R++     +    + + +  L+   +  G   F I          R+L   +   +PT
Sbjct: 323 VDRVTFIGNYNANPKLSADEKTLVMVHRQQGYTNFQIAAQDLQRGNLRVLSNTTLDDSPT 382

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFMD 447
            +P+G  LI++ ++  D G  L  + +NGR    I  P    D   P W  +++
Sbjct: 383 VAPNGTMLIYATRQQ-DRGV-LMLVSINGR--VRIPLPTAQGDVREPSWSPYLN 432


>gi|107100428|ref|ZP_01364346.1| hypothetical protein PaerPA_01001453 [Pseudomonas aeruginosa PACS2]
 gi|116048897|ref|YP_792302.1| translocation protein TolB [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893057|ref|YP_002441926.1| translocation protein TolB [Pseudomonas aeruginosa LESB58]
 gi|254239320|ref|ZP_04932643.1| TolB protein [Pseudomonas aeruginosa C3719]
 gi|254245255|ref|ZP_04938577.1| TolB protein [Pseudomonas aeruginosa 2192]
 gi|296390669|ref|ZP_06880144.1| translocation protein TolB [Pseudomonas aeruginosa PAb1]
 gi|313105859|ref|ZP_07792122.1| TolB protein [Pseudomonas aeruginosa 39016]
 gi|115584118|gb|ABJ10133.1| TolB protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126171251|gb|EAZ56762.1| TolB protein [Pseudomonas aeruginosa C3719]
 gi|126198633|gb|EAZ62696.1| TolB protein [Pseudomonas aeruginosa 2192]
 gi|218773285|emb|CAW29097.1| TolB protein [Pseudomonas aeruginosa LESB58]
 gi|310878624|gb|EFQ37218.1| TolB protein [Pseudomonas aeruginosa 39016]
          Length = 432

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 202/414 (48%), Gaps = 30/414 (7%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF------NLISQDSFKQKITNPDSIPRF 100
           P+++    F   + L   +S ++  DL+ S  F      N+ISQ +   ++        F
Sbjct: 36  PIAVVPFGFQGGNVLPEDMSNIIGNDLRNSGYFEPLPRQNMISQPAQASEVI-------F 88

Query: 101 QDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD 160
           +DW ++G   ++ G ++  G  RL+V++ L+DV   +Q++      S    R ++H I+D
Sbjct: 89  RDWKAVGVNYVMVGNIVPAGG-RLQVQYALFDVGTEQQVLTGSVTGSTDQLRDMSHYIAD 147

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR---DGANIRYLTPSRDQILFEP 217
             ++ +TG KG F++++L+V+    S  + N+   + R   DGA    L  SR+ I+  P
Sbjct: 148 QSFEKLTGIKGAFSTKMLYVTAERFS--VDNTRYTLQRSDYDGARPVTLLQSREPIV-SP 204

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           RFSP+ +++AY +++ +   R+++      R  ++I NF  +  AP FS +G R    + 
Sbjct: 205 RFSPDGRRIAYVSFEQKRP-RIFIQYVDTGRR-EQITNFEGLNGAPAFSPDGNRLAFVLS 262

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D   +IY +DL S A  RLTN L I+    +  D S + F SDR GK Q+Y M  N   
Sbjct: 263 RDGNPEIYVMDLGSRALRRLTNNLAIDTEPFWGKDGSTLYFTSDRGGKPQIYKMNVNSGA 322

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             R++     +    + + +  L+   +  G   F I          R+L   +   +PT
Sbjct: 323 VDRVTFIGNYNANPKLSADEKTLVMVHRQQGYTNFQIAAQDLQRGNLRVLSNTTLDDSPT 382

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFMD 447
            +P+G  LI++ ++  D G  L  + +NGR    I  P    D   P W  +++
Sbjct: 383 VAPNGTMLIYATRQQ-DRGV-LMLVSINGR--VRIPLPTAQGDVREPSWSPYLN 432


>gi|258545747|ref|ZP_05705981.1| TolB protein [Cardiobacterium hominis ATCC 15826]
 gi|258518992|gb|EEV87851.1| TolB protein [Cardiobacterium hominis ATCC 15826]
          Length = 425

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 202/429 (47%), Gaps = 22/429 (5%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           + LCLLL        T+ HA V+V  + A  +   IA        + G K+  +++ DL 
Sbjct: 10  LGLCLLLPW------TAAHAQVEVNVSGAQVAARPIAILPVQG--DPGVKMDYIIASDLH 61

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           ++ +F  +   SF +   +P ++ ++  W   GA  +V G  + +G +    +F L DV 
Sbjct: 62  KTGLFQPLDPKSFPENPASPAAL-QYPAWKQAGADYVVMG--MMQGGNA--GQFVLNDVN 116

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE-SVVSGIIKNSL 193
              Q+  +    + A  R++AH  +D I   +TG++G F +++ +V E     G  + SL
Sbjct: 117 SASQLANENLHDADA--RQLAHQAADWILYRLTGKRGVFGTQLAYVLEQGGAKGARRYSL 174

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V D DGAN R +  S + IL  P ++PN Q VA+ TY +       ++   I    + +
Sbjct: 175 LVSDVDGANRREIYSSNEPIL-SPSWAPNGQAVAFVTYANH---HAQVVIQNIGGGSRVV 230

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                +  AP FS +G        ++   DIY ++L S A  RLT+   I+   ++SPD 
Sbjct: 231 AQGDGISSAPAFSPDGNYLAFVQSENNNPDIYLLNLASGAKSRLTDHAAIDTEPAFSPDG 290

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           + I F SDR G  Q+Y M  NG   +R+      S    + SP G  +  T+ SG  + I
Sbjct: 291 NYIYFTSDRSGSPQIYRMSRNGGGAERVVSGSGYSANSDL-SPDGSSLVLTRQSGGGYQI 349

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G       +   L      +  +++P+G+ +I++ K+ G +  K+ +    G  +TL ++
Sbjct: 350 GTYDLASKRFDALTSGRLDEGASFAPNGQLIIYATKEGGRSVLKVIN-SKGGVAQTLSDS 408

Query: 434 PAYASDPQW 442
                DP W
Sbjct: 409 NGRLRDPAW 417



 Score = 44.3 bits (103), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 4/141 (2%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           EP FSP+   + Y T D     ++Y M +R     +R+ +          S +G   +++
Sbjct: 283 EPAFSPDGNYI-YFTSDRSGSPQIYRM-SRNGGGAERVVSGSGYSANSDLSPDGSSLVLT 340

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            Q      I + DL S   + LT+   ++  AS++P+   I++ +   G+  L V+ S G
Sbjct: 341 RQSGGGYQIGTYDLASKRFDALTSGR-LDEGASFAPNGQLIIYATKEGGRSVLKVINSKG 399

Query: 336 SDQKRISQDKEASYFDPVWSP 356
              + +S D      DP W P
Sbjct: 400 GVAQTLS-DSNGRLRDPAWGP 419


>gi|217969213|ref|YP_002354447.1| translocation protein TolB [Thauera sp. MZ1T]
 gi|217506540|gb|ACK53551.1| Tol-Pal system beta propeller repeat protein TolB [Thauera sp.
           MZ1T]
          Length = 425

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 202/413 (48%), Gaps = 27/413 (6%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           +++    A+  PV I    F +   L   V++VV  DL+RS +F LI           P+
Sbjct: 29  IEITGTGASRFPVIIPI--FENEGRLPQSVTDVVRADLERSGLFTLIDTGPLPM----PE 82

Query: 96  SI-PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
           S+ P      S GA  ++TG +I     R  V FRL+D + ++++       SPA  R +
Sbjct: 83  SVAPDLAAVRSRGADAVLTGSLIPMADGRYDVRFRLFDAQKQQELGAMSLPMSPAQNRLV 142

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            H I+D +Y+ +TG  G F +RI +V +S  +      L + D DG N      SR+ I+
Sbjct: 143 GHRIADFVYEKLTGLPGYFATRIAYVIKSGPN----FELQIADADGMNAATALRSREPII 198

Query: 215 FEPRFSPNQQKVAYATYDDED-ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             P +SP+ Q++AY +++ +  I+ V+ + T   R    + NF+    AP +S +G +  
Sbjct: 199 -SPSWSPDGQRLAYVSFEQKKPIVYVHTLATGQRRV---VANFKGSNSAPSWSPDGSQLA 254

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           + + KD    +Y++    +   RL  +  I+    +  D   I F SDR G  Q+Y + +
Sbjct: 255 VVLTKDGLSQLYAIGADGSGVRRLAQSSGIDTEPFWGAD-GHIYFTSDRGGSPQIYRIPA 313

Query: 334 NGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +G   +R+S   E +Y   P  S  G L+AF   +  +F + V      Q  +L + +  
Sbjct: 314 SGGSAQRVS--FEGNYNVTPRLSFDGKLLAFITRNAGRFQVAVQDVATRQTTILTDSARD 371

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSK--LYSIDLNGR-NETLINTPAYASDPQW 442
           ++P+++P+GR ++++     DTG +  L ++  +GR  + L    A   +P W
Sbjct: 372 ESPSFAPNGRMILYAT----DTGGRGVLSAVSTDGRIRQRLTVQAADVREPAW 420


>gi|160898835|ref|YP_001564417.1| translocation protein TolB [Delftia acidovorans SPH-1]
 gi|160364419|gb|ABX36032.1| Tol-Pal system beta propeller repeat protein TolB [Delftia
           acidovorans SPH-1]
          Length = 441

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/390 (26%), Positives = 182/390 (46%), Gaps = 13/390 (3%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
           +V       + + IA   F    +   K+S ++  DL+RS  F  +     +   T   S
Sbjct: 42  RVEVTGVGLTQLPIAIAAFKGEGQAPQKISAIIQADLERSGQFRAVDTAGVQLDET---S 98

Query: 97  IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            P    W    A  L  G + +    R  V FRLWDV   + + G+ F  +    R +AH
Sbjct: 99  RPDVAMWRQKSADSLAVGSITRLADGRYDVRFRLWDVVKGQDLGGQGFAVTTGDLRLVAH 158

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            ISD IY+ +TGEKG F++RI +V+++  +      L V D DG N +    S + I+  
Sbjct: 159 RISDYIYEKLTGEKGVFSTRIAYVTKAGSN----YRLWVADADGENAQSALSSPEPII-S 213

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +SP   ++AY +++    + VY+ D    R  + + NFR    AP +S +G    +++
Sbjct: 214 PAWSPTGTQLAYVSFESRKPV-VYVHDVASGRR-RLVANFRGSNSAPAWSPDGNSLAVTL 271

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D    +Y +  Q     RL  +  I+   ++S D   I F SDR G  Q+Y + ++G 
Sbjct: 272 SRDGGSQLYLISAQGGEPRRLMQSSGIDTEPNFSSDGRSIYFVSDRGGAPQIYKVPASGG 331

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             +R++     +   P  SP G  +A+    G  F + VM         + + +  ++P+
Sbjct: 332 SAERVTFTGNYN-ISPSVSPDGKWLAYVSRVGGGFKLHVMDLGTGTVNAITDTTADESPS 390

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           ++P+ R ++++  + G     L +  L+G+
Sbjct: 391 FAPNSRLIVYATLQQGR--ESLMTTTLDGK 418


>gi|239815673|ref|YP_002944583.1| translocation protein TolB [Variovorax paradoxus S110]
 gi|239802250|gb|ACS19317.1| Tol-Pal system beta propeller repeat protein TolB [Variovorax
           paradoxus S110]
          Length = 408

 Score =  146 bits (369), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 196/412 (47%), Gaps = 18/412 (4%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
           +V  +    + + IA   F   D    K+SE+V  DL+RS  F  +  D+  Q + +  S
Sbjct: 9   RVEVSGVGLTQLPIALVPFKGQDASPQKISEIVQADLERSGQFRGV--DASGQAL-DEAS 65

Query: 97  IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP-ASWRKIA 155
            P    W    A  LV G V +    R  V FRLWDV  R Q +G + ++ P    R  +
Sbjct: 66  RPDLALWRQRTADSLVVGSVTRLADGRFDVRFRLWDVV-RGQDLGGQSYTVPQGDLRLAS 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H I+D +Y+ +TG+KG F++RI +V++    G  + SL V D DG N +    S + I+ 
Sbjct: 125 HRIADYVYEKLTGDKGIFSTRIAYVTK----GGSRYSLWVADADGENAQAALASPEPII- 179

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +S N Q++AY +++    + VY+ +    +  + + NFR    AP ++ +G    ++
Sbjct: 180 SPVWSSNGQQLAYVSFESRKPV-VYVHNVASGQR-RLLANFRGSNSAPAWAPDGGSLAVT 237

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + +D    +Y++        RLT +  I+    YS D S I F SDR G  Q+Y M ++G
Sbjct: 238 LSRDGGSQLYTIPASGGEPRRLTQSASIDTEPVYSADGSTIYFVSDRGGAPQIYKMSASG 297

Query: 336 SDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
               R++     +Y   P  S  G  +A+    G  F + VM+        + + S  ++
Sbjct: 298 GAPTRVT--FSGTYNISPSVSGDGRWLAYISRVGGAFKLHVMELATGNVSAITDTSADES 355

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
           P+++P+ + ++++    G     L +  L+G+    L        +P W  F
Sbjct: 356 PSFAPNSKLIVYATHLQGR--EALMTTTLDGKIKARLAGQGGDIREPDWGPF 405


>gi|82523864|emb|CAI78812.3| TolB protein [uncultured candidate division WS3 bacterium]
          Length = 464

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 191/392 (48%), Gaps = 29/392 (7%)

Query: 53  TKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI-----TNPDSIPRFQDWNSLG 107
           T  +SI  L  + SE++  DL  S +       + +Q++     T+ D   RF       
Sbjct: 72  TGPLSIRVLAHQASEILRNDLDTSGLIQTTGGSTLRQELGLQTLTSVDLKKRFD------ 125

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
                 GR+  EG D + VE  L+DV   K +   +  +S +++R   H ++D   +++T
Sbjct: 126 --AATQGRLTVEGSD-IVVEAELYDVPTEKMVASFRRRASESTFRSTIHQMADHFLRTLT 182

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           GE G   ++I  V E  + G  +  +C MD DG N+  L  + D  L  P +SP   +VA
Sbjct: 183 GETGIAETKIAVVRE--IGG--RMDICAMDYDGHNLVPLVENGDINLL-PAWSPLGNEVA 237

Query: 228 YATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           Y +Y   E  L V  ++T +    KR+     +  +  +S +GK    +  + +  +I+ 
Sbjct: 238 YTSYVGGEPALYVLNLETGVR---KRLATPGGLNTSAAWSPDGKSLAFAATRGKDPEIFV 294

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V       +++T    I+ S ++SP+  +I F SDR G  Q+YVM ++G++ +R++   E
Sbjct: 295 VRRDGTVLDQITFHPAIDCSPTWSPNGHEIAFTSDRSGTPQIYVMSADGTNVRRLTY--E 352

Query: 347 ASYFD-PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSL 404
            +Y D P WSP GD IAFT   G +F I V+   G     L +   + + P W+P GR +
Sbjct: 353 GNYSDSPAWSPSGDRIAFTSRIGGRFRICVIAAQGGPVYPLTDGPGDHENPAWAPDGRHV 412

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            +   + G   S +Y ++ +G N   I++  +
Sbjct: 413 AYVSNEGGM--SAVYVVNADGTNRRRISSTPH 442


>gi|170723154|ref|YP_001750842.1| translocation protein TolB [Pseudomonas putida W619]
 gi|169761157|gb|ACA74473.1| Tol-Pal system beta propeller repeat protein TolB [Pseudomonas
           putida W619]
          Length = 423

 Score =  146 bits (368), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 206/415 (49%), Gaps = 10/415 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           + V + S   +P+++          L   +++++  DL+ S  ++ I + +   + T   
Sbjct: 16  ILVTSGSDRATPIAVVPFGLQGGSVLPEDMADIIGNDLRNSGYYSPIPRQNMISQPTQAS 75

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
            +  F+DW +LGAQ ++ G ++  G  RL+V++ L++V   +Q++      S    R ++
Sbjct: 76  EV-IFRDWKALGAQYVMVGSIVPSG-GRLQVQYALFNVATEQQVLTGSVAGSVDQLRDMS 133

Query: 156 HTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           H I+D  ++ +TG KG F++R+L+V+ E   +   + +L   D DGA    L  SR+ IL
Sbjct: 134 HYIADQSFEKLTGIKGAFSTRMLYVTAERFSTNNTRYTLQRSDYDGARAVTLLQSREPIL 193

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             PRF+P+ +++AY +++ +   R+++      R  +++ NF  +  AP +S +G R   
Sbjct: 194 -SPRFAPDGKRIAYVSFEQKRP-RIFIQHIDTGRR-EQVTNFEGLNGAPAWSPDGSRLAF 250

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + KD   DIY +++ S    R+T    IN    +  D + + F SDR GK Q+Y    +
Sbjct: 251 VLSKDGNPDIYVMNVASRQISRVTAGPGINTEPFWGKDGNTLYFTSDRGGKPQIYKQSVS 310

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQ 393
           G   +R++     +    + + +  L+   +  G   F +          ++L E S  +
Sbjct: 311 GGSAERVTFVGNYNANPKLSADEKTLVMIHRQQGFTNFKVAAQDLQRGSVKILSETSLDE 370

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFMD 447
           +PT +P+G  LI++ ++ G     L  + LNGR    + T      +P W  +++
Sbjct: 371 SPTVAPNGTMLIYATRQQGR--GVLMLVSLNGRVRLPLPTAQGEVREPSWSPYLN 423


>gi|326795239|ref|YP_004313059.1| protein tolB [Marinomonas mediterranea MMB-1]
 gi|326546003|gb|ADZ91223.1| Protein tolB [Marinomonas mediterranea MMB-1]
          Length = 432

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 205/433 (47%), Gaps = 50/433 (11%)

Query: 13  MKINLCLLLVLIGGFFPTSIHA--FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           MK+   L L+ +      S+ A   +++ + +    P+++   ++   + L   ++++V 
Sbjct: 1   MKLFKPLFLMFVMVITSQSVRAQLVIEITSGADQLLPIAVVPFEYSGANPLPEDIAQIVE 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS VF  I + S   + ++ D++  ++DW  L A+ ++ G V+       +V F L
Sbjct: 61  SDLLRSGVFETIPRASMLSEPSSSDNV-FYRDWRILKAEYILVGAVLNASNGNYQVAFEL 119

Query: 131 WDVKDRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            +V  ++++  K+  S +P+S+R  AH ISD +YQ++TG KG F++RIL+V+        
Sbjct: 120 LNVNTQQRVGNKEVISVTPSSFRDAAHFISDKVYQALTGIKGAFSTRILYVTAEGDRSAP 179

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L V D DG   + +  S++ IL  P +S N + + Y  + D     +++ +    + 
Sbjct: 180 NYKLQVADADGHRAQVIVESKEPIL-SPSWSRNGRFITYVMFRDRR-PNIFIQELATGKR 237

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K +  ++ +  AP +S +GK+  + + KD   ++Y +D+ +   +R+TN   I+   S+
Sbjct: 238 SK-VAQYKGLNGAPAWSPDGKKLALVLSKDNNPEVYVLDIATQKLDRMTNHYAIDTEPSW 296

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA---------------------- 347
            PD   I+F SDR G  Q+Y +     + +R++ + ++                      
Sbjct: 297 EPDGKGIIFTSDRGGNPQIYRLDVKSKEVERVTFEGDSNTRARMTPDGRYLVTVQKDSGN 356

Query: 348 ------------------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLL 386
                             +Y D  P  +P G ++ +    G K  + V+  DG  + +L 
Sbjct: 357 YHIALQDMKNGRVTILTQTYLDESPSIAPNGSMVMYATTEGNKGILSVVSVDGLVKYKLP 416

Query: 387 VEDSNLQAPTWSP 399
             + +++ P WSP
Sbjct: 417 SSNGDVREPAWSP 429


>gi|254468571|ref|ZP_05081977.1| Tol-Pal system beta propeller repeat protein TolB [beta
           proteobacterium KB13]
 gi|207087381|gb|EDZ64664.1| Tol-Pal system beta propeller repeat protein TolB [beta
           proteobacterium KB13]
          Length = 425

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 204/418 (48%), Gaps = 12/418 (2%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L  L + +    P      + +    AN   V++   +   I+    ++  V+  DL RS
Sbjct: 4   LAFLFITLFYLIPLPAIEVIDILGGKANELSVAVIPFQDDLIENEKNQIHNVIKSDLSRS 63

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F +I      +  T+ + +  +  W+ L  ++LV GRV + G ++++V + L DV   
Sbjct: 64  GFFRVIDTGGVNKLPTSLNDV-DYSFWSGLQTELLVIGRV-QRGDNQIKVVYELIDVFKE 121

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           K ++  ++  +    R+I H IS+ IY+ ITG KG F+++I FV +   +   K  L V 
Sbjct: 122 KMMVSSEYSGNIKQDRQIGHQISNIIYEKITGSKGVFHTKIGFVQKINNN---KYQLNVS 178

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D DG N + +  S +Q +   R+SP+ +K+AY +++ +  + +Y+ + + +   + + NF
Sbjct: 179 DMDGFNKKAIVTS-NQPIISTRWSPDGEKIAYVSFEKKKPV-IYVQNLK-NGERQLVANF 235

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +    AP +S + K+  I +  +    IY ++      +RL  +  I+    ++PD   I
Sbjct: 236 KGNNSAPAWSPDNKQLAIVLTYNNFSQIYVMNADGKNIKRLMRSRSIDTEPVWAPDGKSI 295

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGV 375
            F SDR G  Q+Y +       KR++   E  Y   P  SP G L+ F       F +GV
Sbjct: 296 YFVSDRGGGPQIYKIDLKTEQIKRVT--FEGKYNVSPQLSPDGKLLTFITNDNGAFKVGV 353

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                +Q   L +  N +AP +SP+G  ++++  KD +  + L ++ LNG    +INT
Sbjct: 354 QNLISNQVIKLTQGRNDEAPVFSPNGHMVLYTH-KDSEKETSLSTVSLNGFKTQVINT 410


>gi|328953807|ref|YP_004371141.1| Protein tolB [Desulfobacca acetoxidans DSM 11109]
 gi|328454131|gb|AEB09960.1| Protein tolB [Desulfobacca acetoxidans DSM 11109]
          Length = 427

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/441 (25%), Positives = 209/441 (47%), Gaps = 26/441 (5%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVS 66
           +N+ I++ LLLV  G     S       A  +  Y    IA  K      S  ELG  ++
Sbjct: 1   MNVVISISLLLVWAGDGLAQSREYIDVRAPITKKYV---IATPKLQGPGGSGPELGAALA 57

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPD-SIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
               +DL+ S  F ++   ++      P  S  +  + ++LG  +++ G   +EG  +L 
Sbjct: 58  VQADQDLRLSGHFTVLDPGTYDSSPIGPSPSTGQLHNLSALGCNLVIAGGWRQEG-GQLV 116

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           ++ +L D    + ++GK++       +++     +++   +TGE+G    R+ F+S    
Sbjct: 117 LDLKLIDPGSGQMLVGKRYRGGANDGQRMMTQFVNEVVLFLTGERGVPQGRLAFIS---- 172

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G     L VMD  G   + LT  R  +   P +SP+ Q+V + +Y       +Y ++  
Sbjct: 173 GGTDVRELYVMD-IGGTPKQLTRYRT-LTLTPSWSPDGQEVFFCSYRG-GFPALYAVNPG 229

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD--IYSVDLQSNATERLTNTLFI 303
                +++    ++ + P   + G R L++   +++ D  IY +D Q N  +RLT +  I
Sbjct: 230 SGSI-RKLSTHGTLNVTP---AGGPRGLLAATLNKSGDQEIYLLDRQGNIKQRLTQSPGI 285

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +IS ++SPD +Q+ F S+R G  Q+Y++ + G   +R++     +   P WSP+GDLIA+
Sbjct: 286 DISPTFSPDGAQVAFVSNRGGNPQIYIVSTGGGQPRRLTFGGTYN-VSPAWSPRGDLIAY 344

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +G  F I V+   G   R +  + + ++PTWSP G  +  S  + G   S +Y +++
Sbjct: 345 ASRTGGGFQIFVISPQGGGARQITREGSNESPTWSPDGSFIACSSTRGGT--SAIYLVNV 402

Query: 424 -NGRNETLINTPAYASDPQWV 443
             G    L   P   + P W 
Sbjct: 403 KTGTATRLTTMPGAQTQPAWA 423


>gi|89075797|ref|ZP_01162185.1| translocation protein TolB precursor [Photobacterium sp. SKA34]
 gi|89048529|gb|EAR54104.1| translocation protein TolB precursor [Photobacterium sp. SKA34]
          Length = 442

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 209/447 (46%), Gaps = 25/447 (5%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           + LCL L+ +  F    +   +    +SA   P+ +   ++    +L   +S V++ DLQ
Sbjct: 6   MGLCLALLSVSQFAHAELELVITDGVDSAR--PIGVVPFQWEGEGKLPTDISAVIASDLQ 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           RS  F+ + +    Q   N   I  +  W+ +G   +VTG ++K       V ++L D+ 
Sbjct: 64  RSGKFSPVPESKLPQLPHNESQI-DYSAWSKMGVDAVVTGTIVKNQDGNYTVNYQLVDIV 122

Query: 135 DRKQIIGKKFFSS-------------PASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             K   G +  +              P   R+ AH ISD IYQ +TGE+G F +RI +V 
Sbjct: 123 KGKLAAGTEGAAKGDYLLLNNQASVKPNRMRQYAHRISDLIYQKLTGERGAFLTRIAYVD 182

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +  S      L V D DG N R +  S+ Q L  P +SP+  K+AY +++     ++Y+
Sbjct: 183 NNR-SSKFPYQLRVADYDGYNERVVLKSK-QPLMSPAWSPDGSKLAYVSFESGKA-QIYV 239

Query: 242 MDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +D  I +  + +  N+     +P+FS +G +  + + +  ++ IY  DL++    +LT+ 
Sbjct: 240 LD--IYKGTREVVANYPRHNGSPQFSPDGTKLAMVLSESGSLQIYIKDLKTKQLRQLTHG 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              N  A ++PD   + F SDR G+ Q+Y +     D +R++  + A    P  +P G  
Sbjct: 298 RANNTEAVWAPDGQSLYFTSDRGGRPQVYHLDLATGDTQRVTW-QGAQNMGPQITPDGRY 356

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +     S   + I          ++L +    ++P+ +P+G  +I+S  ++  T  +L  
Sbjct: 357 LVVVNRSDSGYNIAKQDLKTGAMQILTKARLAESPSIAPNGSMIIYSSAQNSGT-YELSL 415

Query: 421 IDLNGRNET-LINTPAYASDPQWVGFM 446
           + ++GR +  L +T      P W  F+
Sbjct: 416 VSIDGRFQARLPSTSKRVRAPSWGPFL 442


>gi|117619070|ref|YP_858094.1| beta-propeller repeat-containing to-pal system protein TolB
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|166988073|sp|A0KP93|TOLB_AERHH RecName: Full=Protein tolB; Flags: Precursor
 gi|117560477|gb|ABK37425.1| Tol-Pal system beta propeller repeat protein TolB [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 441

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 214/444 (48%), Gaps = 28/444 (6%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           CLLL   G     ++   +    +SA   P+++A  K+    +L   ++EVVS DL RS 
Sbjct: 12  CLLL---GQSAQAALDIVITGGIDSAR--PIAVAPFKWEGNGQLPQDIAEVVSNDLMRSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV---- 133
            F  +++    Q  +    I  F  W S G + +V G +   G    ++ F L DV    
Sbjct: 67  KFKPLARGQMPQTPSTSGEI-NFAPWASQGVEAVVVGSIAAVGDGTYKINFELVDVLKGQ 125

Query: 134 -------KDRKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
                  +    I+  +  + P A  R+ AH ISD +Y+ +TGE+G F +R+ +VS  V 
Sbjct: 126 LAKAQGGESNGYILDSRMATIPGAQMRQFAHRISDIVYERLTGERGAFLTRLAYVS--VQ 183

Query: 186 SGI-IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            G      L + D DG N + L  SR+  L  P +SP+  K+AY +++++    +Y+ D 
Sbjct: 184 QGTQFPYQLRIADYDGYNEKTLLRSREP-LMSPAWSPDGSKLAYVSFENQKS-EIYVQDI 241

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +    I +FR +  AP +S +G+R  I + KD + ++Y VD+ S    R+T +  I+
Sbjct: 242 YTQQR-SLITSFRGINGAPEWSPDGRRLAIVLSKDGSPNLYVVDVASKQLTRVTTSRVID 300

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              S+ PD   ++F S+R GK Q+Y +       +R++ + E++    + +P G ++   
Sbjct: 301 TEPSWMPDGQNLLFTSERGGKPQIYSVNLATGMTRRMTWEGESNQGASI-TPDGKIMVMV 359

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                ++ I     + +   +L + +  ++P+ +P+G  +I++    G     L S D  
Sbjct: 360 TRVQGQYRIARQDMENNALLVLTQSALDESPSVAPNGSMIIYATIYQGRKSLALVSTD-- 417

Query: 425 GRNETLINTPA-YASDPQWVGFMD 447
           GR + ++ T +     P W  F++
Sbjct: 418 GRFKAVLPTSSGEIRAPAWSPFLN 441


>gi|330828307|ref|YP_004391259.1| protein tolB [Aeromonas veronii B565]
 gi|328803443|gb|AEB48642.1| Protein tolB [Aeromonas veronii B565]
          Length = 441

 Score =  145 bits (365), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 215/444 (48%), Gaps = 28/444 (6%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           CLLL   G     ++   +    +SA   P+++A  K+    +L   ++EVVS DL RS 
Sbjct: 12  CLLL---GQSAQAALDIVITGGIDSAR--PIAVAPFKWEGNGQLPQDIAEVVSNDLMRSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV---- 133
            F  +++    Q  ++   I  F  W S G + +V G +   G    +V F L DV    
Sbjct: 67  KFKPLARGQMPQTPSSSSEI-NFAPWASQGVEAVVVGSISAVGDGTYKVNFELVDVLKGQ 125

Query: 134 -------KDRKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
                  +    I+  +  + P A  R+ AH ISD +Y+ +TGE+G F +R+ +VS  V 
Sbjct: 126 LAKAQGGESNGYILDSRMATIPGAQMRQFAHRISDIVYERLTGERGAFLTRLAYVS--VQ 183

Query: 186 SGI-IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            G      L + D DG N + L  SR+  L  P +SP+  K+AY +++++    +Y+ D 
Sbjct: 184 QGTQFPYQLRISDYDGYNEKTLLRSREP-LMSPAWSPDGSKLAYVSFENQKS-EIYVQDI 241

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +    I +FR +  AP +S +G+R  I + KD + ++Y VD+ S    R+T +  I+
Sbjct: 242 YTQQR-SLITSFRGINGAPEWSPDGRRLAIVLSKDGSPNLYVVDVASKQLTRVTTSRVID 300

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              S+ PD   ++F S+R GK Q+Y +       +R++ + E++    + +P G ++   
Sbjct: 301 TEPSWMPDGQNLLFTSERGGKPQIYSVNLATGMTRRMTWEGESNQGASI-TPDGKIMVMV 359

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                ++ I     + +   +L + +  ++P+ +P+G  +I++    G     L S D  
Sbjct: 360 TRVQGQYRIARQDMENNALLVLTQSALDESPSVAPNGSMIIYATIYQGRKSLALVSTD-- 417

Query: 425 GRNETLINTPA-YASDPQWVGFMD 447
           GR + ++ T +     P W  F++
Sbjct: 418 GRFKAVLPTSSGEIRAPAWSPFLN 441


>gi|71909662|ref|YP_287249.1| translocation protein TolB [Dechloromonas aromatica RCB]
 gi|71849283|gb|AAZ48779.1| TolB, N-terminal:WD40-like Beta Propeller [Dechloromonas aromatica
           RCB]
          Length = 437

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 194/409 (47%), Gaps = 18/409 (4%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           +++    AN  PV+I    F         V+  V  DL+RS +F L+   +       P 
Sbjct: 40  IEITGAGANRIPVTI--VDFPGDPTAARVVTATVRADLERSGLFKLVDNGTAAFDENAPV 97

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
           +     +W   GA  L  G + +    R+   FRL+D +    + G  + ++ +  R   
Sbjct: 98  N---HAEWKGKGADALAAGSIARSTDGRMEARFRLYDTQKGVSLGGAAYVTNNSQLRAAG 154

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H I+D IY+ +TGEKG F++RI +V    V    +  L + D DG N      S + I+ 
Sbjct: 155 HRIADFIYEKLTGEKGVFSTRIAYV----VKARGQFLLQIADSDGQNAATALSSTEPII- 209

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +SP+  ++AY +++ +    V  + T        + NF+    AP +S +G++  + 
Sbjct: 210 SPVWSPDGGRLAYVSFEKKKP--VIYVHTLASGQRHIVANFKGSNSAPAWSPDGRKLAVV 267

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + KD    IYSV+   +  +R+T +  I+    YS D   I F SDR G  Q+Y + ++G
Sbjct: 268 LSKDGNSQIYSVNADGSGLQRITQSSGIDTEPRYSADGGTIYFTSDRGGSPQVYQVGASG 327

Query: 336 SDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            D KR++   E SY   P  +P G  +AF      +F + VM     Q +++ + +  ++
Sbjct: 328 GDAKRVT--FEGSYNVSPRPAPDGKSLAFISRREGRFQLAVMDLASRQVQVVSDSNKDES 385

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQW 442
           P+++P+ R ++ + +  G     L ++  +GR +  ++  A    +P W
Sbjct: 386 PSFAPNSRMILIATEIGGR--GVLSAVSSDGRIKQRLSVAAGDVREPAW 432


>gi|302038650|ref|YP_003798972.1| protein TolB [Candidatus Nitrospira defluvii]
 gi|300606714|emb|CBK43047.1| Protein TolB precursor [Candidatus Nitrospira defluvii]
          Length = 443

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 216/444 (48%), Gaps = 22/444 (4%)

Query: 11  LNMKINLCLLLV--LIGGFFPTSIHAFVKVATNSANYSPVSI-AFTKFVSIDELGGKVSE 67
           + + I LC+++   L G     +   F++         P+ +  F      + LGG++ E
Sbjct: 6   IGLMIALCVVVGAGLFGILDSRATDVFLEATRPDFQKIPIGVFGFQNGGGPEWLGGRIEE 65

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPR--FQDWNSLGAQVLVTGRVIKEGKDR-- 123
           V+  DLQRS VF+L+   +   K     +  +  F+     G  VLV G+  ++   +  
Sbjct: 66  VLKADLQRSLVFSLVDLPAIGVKAREVSTTDKAIFKQAAENGVSVLVWGKSGQKNGSKES 125

Query: 124 -LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            L ++  ++D    + + GK++  S +  R +AH  +D++    TGE G   ++I++V+E
Sbjct: 126 ELLMDGFVYDSGSDEVVGGKRYVGSTSVVRLMAHRFADELVFRYTGEPGIARTKIVYVAE 185

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFSPNQQKVAYATYDDEDILRVYL 241
              +      L VMD DG   + +T   D  L   PR+SP+++ + +  Y   +   + +
Sbjct: 186 HGNA----RELFVMDYDGYEPKQITA--DGFLNLMPRWSPDRRFIVFTAYRSRNTQDIDI 239

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++    +    + +   + + P  S +G     +  +D   +IY +D ++   +RLT   
Sbjct: 240 LELATGKRWTLV-SMAGLNITPALSPDGNFLAFASSQDGNSEIYKLDTRTKTPQRLTVNQ 298

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             ++S ++SP   +I F SDR G  Q+++M ++GS+ +R++ + + +   P WSP+G+ I
Sbjct: 299 GGDLSPTWSPTGREIAFTSDRGGAPQVFIMSADGSNVRRLTYEGDYNA-APAWSPRGNWI 357

Query: 362 AFTKFSGEK-FAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           A+   + ++ + I  +  DG +   +     +  +P+WSP GR + FS   DG   S +Y
Sbjct: 358 AYVCRTAQRLYKICTVSPDGQKRVQVTTGPGIDDSPSWSPDGRHITFSSTVDGK--SHIY 415

Query: 420 SIDLNGRN-ETLINTPAYASDPQW 442
            +D +G+  E +     + S P W
Sbjct: 416 MVDTDGKGLERITFGGTHNSSPSW 439



 Score = 40.0 bits (92), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 6/119 (5%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +M  DG+N+R LT   D     P +SP    +AY     +   R+Y + T      KR+ 
Sbjct: 327 IMSADGSNVRRLTYEGDYNA-APAWSPRGNWIAYVCRTAQ---RLYKICTVSPDGQKRVQ 382

Query: 255 NFRSMIL--APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                 +  +P +S +G+    S   D    IY VD      ER+T     N S S+SP
Sbjct: 383 VTTGPGIDDSPSWSPDGRHITFSSTVDGKSHIYMVDTDGKGLERITFGGTHNSSPSWSP 441


>gi|237809442|ref|YP_002893882.1| translocation protein TolB [Tolumonas auensis DSM 9187]
 gi|237501703|gb|ACQ94296.1| Tol-Pal system beta propeller repeat protein TolB [Tolumonas
           auensis DSM 9187]
          Length = 431

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 204/443 (46%), Gaps = 29/443 (6%)

Query: 19  LLLVLIGG-FFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           LL+ L+G  +F  S  A + +       S   +A   F S   L   ++ V+S DL RS 
Sbjct: 4   LLMALVGWLWFSQSAMAELDILVTGGMDSGRPVAIVPFKSDGSLPEDLANVISSDLMRSG 63

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F  +S++S  ++      I  +  W++LG + +V G V   G  + RV F L DV   K
Sbjct: 64  KFTPLSRNSMPEQPAQSGQI-NYPTWSALGTEAVVVGHVESAGAGQYRVTFELVDVARGK 122

Query: 138 ----QIIGKKFFSSPA-SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                ++  +  +  A   RK AH ISD +Y+ +TGE+G F + IL+V+    S  +   
Sbjct: 123 DGGNAVLDSRVATVTAKQLRKYAHRISDIVYEKLTGERGAFLTSILYVTVDR-SQAMPYR 181

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L + D DG N R L  SR+ I+  P +SP+ +++AY +++      +++ D         
Sbjct: 182 LMLADYDGYNERMLLRSREPIM-SPTWSPDGRRIAYVSFEKRTPA-IFIQDL-------- 231

Query: 253 IGNFRSMILA-------PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
               RSM++A       P +S +G+   + + KD   DIY+VD+ S    RLT+   I+ 
Sbjct: 232 YSQARSMLVALPGINGAPSWSPDGRSMAVVLSKDGQPDIYTVDIGSRRLNRLTSDQAIDT 291

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             S+S D   + F S+R G+ Q+Y +        R++ + + S      +P G  +    
Sbjct: 292 EPSWSADGRSVFFTSERGGRPQIYKVDVASHSASRVTWEGD-SNLGASATPDGKALVMVS 350

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                + I     +G    +L   S  ++P+ +P+G  +I+S    G  G  L S D  G
Sbjct: 351 RVQGSYRIARQDLNGGGVYVLTSSSLDESPSVAPNGSMIIYSTVYQGRQGLALVSAD--G 408

Query: 426 R-NETLINTPAYASDPQWVGFMD 447
           R    L +       P W  F++
Sbjct: 409 RFKANLPSAKGEVRSPAWSPFLN 431


>gi|118574577|sp|Q478F2|TOLB_DECAR RecName: Full=Protein tolB; Flags: Precursor
          Length = 426

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/409 (26%), Positives = 194/409 (47%), Gaps = 18/409 (4%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           +++    AN  PV+I    F         V+  V  DL+RS +F L+   +       P 
Sbjct: 29  IEITGAGANRIPVTI--VDFPGDPTAARVVTATVRADLERSGLFKLVDNGTAAFDENAPV 86

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
           +     +W   GA  L  G + +    R+   FRL+D +    + G  + ++ +  R   
Sbjct: 87  N---HAEWKGKGADALAAGSIARSTDGRMEARFRLYDTQKGVSLGGAAYVTNNSQLRAAG 143

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H I+D IY+ +TGEKG F++RI +V    V    +  L + D DG N      S + I+ 
Sbjct: 144 HRIADFIYEKLTGEKGVFSTRIAYV----VKARGQFLLQIADSDGQNAATALSSTEPII- 198

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +SP+  ++AY +++ +    V  + T        + NF+    AP +S +G++  + 
Sbjct: 199 SPVWSPDGGRLAYVSFEKKKP--VIYVHTLASGQRHIVANFKGSNSAPAWSPDGRKLAVV 256

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + KD    IYSV+   +  +R+T +  I+    YS D   I F SDR G  Q+Y + ++G
Sbjct: 257 LSKDGNSQIYSVNADGSGLQRITQSSGIDTEPRYSADGGTIYFTSDRGGSPQVYQVGASG 316

Query: 336 SDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            D KR++   E SY   P  +P G  +AF      +F + VM     Q +++ + +  ++
Sbjct: 317 GDAKRVT--FEGSYNVSPRPAPDGKSLAFISRREGRFQLAVMDLASRQVQVVSDSNKDES 374

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQW 442
           P+++P+ R ++ + +  G     L ++  +GR +  ++  A    +P W
Sbjct: 375 PSFAPNSRMILIATEIGGR--GVLSAVSSDGRIKQRLSVAAGDVREPAW 421


>gi|260556542|ref|ZP_05828760.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii ATCC 19606]
 gi|260409801|gb|EEX03101.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii ATCC 19606]
          Length = 426

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 186/361 (51%), Gaps = 34/361 (9%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +V  DL RS  F   S++       N     +  DW + G   +VTG+ IK+  D   V 
Sbjct: 57  IVETDLNRSGRFTSSSKNLPANAAINQI---QASDWQAAGIPYVVTGQ-IKQTADGFEVH 112

Query: 128 FRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++L+DV+ ++Q +  +  + PAS  R+  H +SD IYQ++TG  GDF+ RI +V  +  +
Sbjct: 113 YQLYDVQ-KQQYLLNELLNVPASRIRQAGHMVSDAIYQALTGIPGDFSGRIAYVLRNPAT 171

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              + +L + D DG   + +  SRD IL  P ++P+ +K+AY +++ +    +YL D   
Sbjct: 172 PAERYTLQIADTDGEQPKTVLSSRDPIL-SPAWTPDAKKIAYVSFETKRPA-IYLQDLST 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + I +F+ +  AP FS +GK  L +   +   +IY +DL +   +R+TN   I+  
Sbjct: 230 GTR-EVITSFKGLNGAPSFSPDGKSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSGIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A Y+PD    +F SDR G  Q+Y         KR++       F   ++ +G L A    
Sbjct: 289 ARYTPDGKAFIFTSDRGGSPQIYRYDFGNGSVKRLT-------FKGSFNARGTLSA---- 337

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNL------------QAPTWSPSGRSLIFSRKKDGDT 414
            G+K A+ V +  GS  ++ ++D N             ++P++SP+G+ ++++  ++G+ 
Sbjct: 338 DGKKIAL-VHRPSGSNYKVAIQDINTGIVNILTPTSLDESPSFSPNGQMVVYA-TREGNR 395

Query: 415 G 415
           G
Sbjct: 396 G 396


>gi|229592295|ref|YP_002874414.1| translocation protein TolB [Pseudomonas fluorescens SBW25]
 gi|259533872|sp|C3JYS2|TOLB_PSEFS RecName: Full=Protein tolB; Flags: Precursor
 gi|229364161|emb|CAY51810.1| TolB colicin import protein [Pseudomonas fluorescens SBW25]
          Length = 433

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 209/424 (49%), Gaps = 28/424 (6%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF------NLISQDSFKQ 89
           + V + S   +P+++    +     L   ++++VS DL+ S  +      N+ISQ +   
Sbjct: 26  ILVTSGSDRATPIAVVPFGWQGGSVLPDDMAQIVSDDLRNSGYYAPIPKGNMISQPNQAS 85

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
           ++        F+DW ++GAQ L+ G +   G  RL++++ L++V   +Q++      +  
Sbjct: 86  EVV-------FRDWKAVGAQYLMVGNITPAG-GRLQIQYTLFNVATEQQVLTGSVSGTAE 137

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR---DGANIRYL 206
             R +AH ISD  ++ +TG KG F++R+L+V+    S  + N+   + R   DGA    L
Sbjct: 138 QLRDMAHYISDQSFEKLTGIKGAFSTRLLYVTAERFS--VDNTRYTLQRSDYDGARAVTL 195

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             SR+ IL  PRF+P+ +++AY +++     R+++      R  ++I NF  +  AP +S
Sbjct: 196 LQSREPIL-SPRFAPDGKRIAYVSFEQRRP-RIFVQHIDTGRR-EQITNFEGLNGAPAWS 252

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G R    + KD   DIY +++ S    R+T+   IN    +  D S I F SDR GK 
Sbjct: 253 PDGSRLAFVLSKDGNPDIYVMNMASRQISRVTSGPGINTEPFWGKDGSTIYFTSDRGGKP 312

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERL 385
           Q+Y    NG   +R++     +    + + +  L+   +  G   F +          ++
Sbjct: 313 QVYKANVNGGGAERVTFIGNYNANPKLSADEKTLVMIHRQDGFTNFRVAAQDLQRGTVKI 372

Query: 386 LVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWV 443
           L  D+NL ++ T +P+G  +I++ ++ G     L  + +NGR    + T      +P W 
Sbjct: 373 LT-DTNLDESATVAPNGTMVIYATRQQGR--GVLMLVSINGRVRLPLPTAQGEVREPSWS 429

Query: 444 GFMD 447
            +++
Sbjct: 430 PYLN 433


>gi|330975321|gb|EGH75387.1| translocation protein TolB [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 399

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 205/404 (50%), Gaps = 12/404 (2%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVK---VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           INL   L+++  F    + A  K   V + S   +P+++    +   + L   ++E++S 
Sbjct: 2   INLFRGLLVVLCFASAMVSAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIISN 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L+
Sbjct: 62  DLRNSGYYAPIPKQNMISLPTQASEV-IFRDWKALGAQYVMVGNITPAG-GRLQIQYALF 119

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIK 190
           +V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+ E       +
Sbjct: 120 NVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNTR 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L   D DGA    L  SR+ IL  PRF+P+ +++AY +++ +   R+++      R  
Sbjct: 180 YTLQRSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGRR- 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    + 
Sbjct: 237 EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFFG 296

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-E 369
            D S + F SDR GK Q+Y    NG   +R++     +    + + +  L+   +  G  
Sbjct: 297 KDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFT 356

Query: 370 KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDG 412
            F + V        ++L  DSNL ++PT +P+G  +I++ ++ G
Sbjct: 357 NFKVAVQDLARGSVKILT-DSNLDESPTVAPNGTMVIYATRQPG 399



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 7/102 (6%)

Query: 329 YVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQER 384
           Y +Q +  D  R   + Q +E     P ++P G  IA+  F  ++  I V   D G +E+
Sbjct: 180 YTLQRSDYDGARAVTLLQSREP-ILSPRFAPDGKRIAYVSFEQKRPRIFVQHIDTGRREQ 238

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +   +    AP WSP G  L F   KDG+   ++Y I+L  R
Sbjct: 239 ITNFEGLNGAPAWSPDGSKLAFVLSKDGN--PEIYVINLASR 278


>gi|319793386|ref|YP_004155026.1| toL-pal system beta propeller repeat protein tolb [Variovorax
           paradoxus EPS]
 gi|315595849|gb|ADU36915.1| Tol-Pal system beta propeller repeat protein TolB [Variovorax
           paradoxus EPS]
          Length = 408

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 195/411 (47%), Gaps = 16/411 (3%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
           +V  +    + + IA   F   D    K+S++V  DL+RS  F  +  D+  Q + +  S
Sbjct: 9   RVEVSGVGLTQLPIALVPFKGQDSSPQKISDIVQADLERSGQFRGV--DASGQAL-DEAS 65

Query: 97  IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            P    W    A  LV G V +    R  V+FRLWDV   + + G+ +       R  +H
Sbjct: 66  RPDLSLWRQRTADSLVVGSVTRLADGRFDVKFRLWDVVKGQDLGGQSYTVPQGDLRLASH 125

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            I+D +Y+ +TGEKG F++RI +V++    G  + SL V D DG N +    S + I+  
Sbjct: 126 RIADFVYEKLTGEKGIFSTRIAYVTK----GGSRYSLWVADADGENAQAALASPEPII-S 180

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +S N Q++AY +++    + VY+ +    +  + + NF+    AP ++ +G    +++
Sbjct: 181 PCWSSNGQQLAYVSFESRKPV-VYVHNVASGQR-RLLANFKGSNSAPAWAPDGNSLAVTL 238

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D    +Y++        RLT +  I+    YS D S I F SDR G  Q+Y M ++G 
Sbjct: 239 SRDGGSQLYTIPASGGEPRRLTQSASIDTEPVYSADGSTIYFVSDRGGAPQIYKMGASGG 298

Query: 337 DQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +  R++     +Y   P  S  G  +A+    G  F + VM+        + + +  ++P
Sbjct: 299 NPTRVT--FSGTYNISPSVSGDGRWLAYISRIGGAFKLQVMELATGNVASITDTNADESP 356

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
           +++P+ + ++++    G     L +  L+G+    L        +P W  F
Sbjct: 357 SFAPNSKLIVYATHLQGR--EALMTTTLDGKIKARLAGQAGDIREPDWGPF 405


>gi|260219498|emb|CBA26343.1| Protein tolB [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 408

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 182/395 (46%), Gaps = 16/395 (4%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
            A  +V  +    + + +A   F   D+   K++ +V  DL+RS  F  +   S   +  
Sbjct: 7   QAQFRVEVSGVGMTQIPVAIAAFRGEDQSPQKIAAIVQADLERSGQFKGVESGSGLDESA 66

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
            PD           GA  LV G V +    R  V FRLWDV   + + G+     P   R
Sbjct: 67  RPD----LNVMRQRGADALVAGSVTRLADGRFDVRFRLWDVVRNQDLGGQSHAVLPGDLR 122

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
             AH I+D +Y+ +TG+KG F++RI +V++   +G   N L V D DG N +    S + 
Sbjct: 123 LAAHRIADFVYERLTGDKGVFSTRISYVTK---AGPTYN-LWVADADGENAQSALSSPEP 178

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           I+  P ++PN  ++AY +++    + VY+ D    R  + + +F+    AP +S +G+  
Sbjct: 179 II-SPSWAPNGNQLAYVSFEARKPV-VYVHDVATGRR-RLVASFKGSNSAPTWSPDGRSI 235

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +++ +D    +Y +D       RL  +  I+    Y+ D   I F SDR G  Q+Y + 
Sbjct: 236 ALTLSRDGGSQLYVMDANGGEPRRLMQSPAIDTEPVYTSDGKTIYFVSDRGGSPQIYRVP 295

Query: 333 SNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           + G   +R++      Y   P  SP G  +A+       F + VM         + + + 
Sbjct: 296 AGGGSAERVT--FSGGYNISPALSPDGKWLAYVSRVNGAFKLHVMDIVSGSVSAITDKAA 353

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            + P++SP+ R +I++    G     L +  L+GR
Sbjct: 354 DENPSFSPNSRLIIYAILLQGK--EALMTTTLDGR 386


>gi|94501020|ref|ZP_01307544.1| Periplasmic component of the Tol biopolymer transport system
           [Oceanobacter sp. RED65]
 gi|94426767|gb|EAT11751.1| Periplasmic component of the Tol biopolymer transport system
           [Oceanobacter sp. RED65]
          Length = 426

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 218/443 (49%), Gaps = 34/443 (7%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDV 78
           L+ VL+      S  A + +  +    S + I+   F   + L      +V  DL+RS  
Sbjct: 4   LIFVLLSFLIHASAKAELTIEISQGIASAIPISVVPFQVPEGLTTLPEGIVRNDLERSGH 63

Query: 79  FNLISQDSFKQKITNPD--SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
           F +++    K  +++P   S   F DW  L  + +V GRV   G D+ +V+++L+DV + 
Sbjct: 64  FEVLAP---KDMLSHPHVQSDIYFTDWRLLKQEYVVVGRVTPLG-DKYQVQYQLFDVFNE 119

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
            +I+ +    +    R +AH ISD IY+ +TG +G F+++I +V+ +      + SL + 
Sbjct: 120 TEILAQTLTGTAEQLRDVAHRISDAIYEQLTGIRGAFSTKIAYVTTNPQR--TQFSLAIA 177

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D DGA  + +  S   I F P +SP+ +K+AY   +DE   +VY+ D    +  + I   
Sbjct: 178 DSDGAREKVVLRSSYSI-FSPTWSPDGKKLAYVMMEDEGS-KVYIQDLATGQK-ELISAQ 234

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           + +  AP FS +G +  +++ KD   +IY+VDL++N   R+T    I+   ++ PD   I
Sbjct: 235 KGINSAPSFSPDGNKLALTLSKDGNSEIYTVDLRTNEWSRITRHYSIDTEPNWMPDGVHI 294

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--------SG 368
           +F S R G  Q+Y +       +R++       FD  ++ +  L    +F         G
Sbjct: 295 IFTSGRSGSPQIYRVNVETEYVERLT-------FDGHYNARARLAQDGRFLVLVHQAERG 347

Query: 369 EKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             F I  +       ++L ED+ L ++P+ SP+G  ++++ K +    S L ++ ++G  
Sbjct: 348 GDFHIASLDLTRGLLQILTEDTYLDESPSVSPNGVMVMYAAKHNNR--SILAAVSVDGDV 405

Query: 428 ETLINTPAYASD---PQWVGFMD 447
           + L+  P+   D   P W  +++
Sbjct: 406 KFLV--PSKTGDVREPAWGPYLN 426


>gi|288940690|ref|YP_003442930.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Allochromatium vinosum DSM 180]
 gi|288896062|gb|ADC61898.1| Tol-Pal system beta propeller repeat protein TolB [Allochromatium
           vinosum DSM 180]
          Length = 436

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 192/384 (50%), Gaps = 19/384 (4%)

Query: 65  VSEVVSKDLQRSDVFN-LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           ++ ++  DL R+  F  + ++D      T  +    F+DW+ LG   LV GRV +     
Sbjct: 61  MAAIIGADLARTGRFKPMPTRDMLDMPATREEV--DFRDWSLLGMNNLVIGRV-EPDPTG 117

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            R+ F L+DV    ++      S+ +  R+ AH I+D+I++ +TG+ G   +RI +++ +
Sbjct: 118 YRISFSLFDVFRGTELASSSLVSTQSGMRQTAHRIADEIHEKLTGQPGVAATRIAYITST 177

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                +  +L V D DG N + +  S +  L  P +SP+ Q++AY +++++    +Y+ +
Sbjct: 178 GSGADLTVTLRVADADGYNPQTIVSSAEP-LMSPAWSPDGQRLAYVSFENKRAA-IYIQE 235

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R  + + +   +  +P FS +G R  +++ KD   DIYS++L S    RLT+   I
Sbjct: 236 LSSGRR-ELVASHPGINGSPAFSPDGSRLAMTLSKDGNPDIYSLNLLSRELTRLTDHYAI 294

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQG- 358
           +   S+SPD   I+F SDR G  Q+Y M + G   +RIS + +    ASY     +P G 
Sbjct: 295 DTEPSWSPDGQSIIFTSDRGGSPQIYRMAATGGPAERISVEGDYNGRASY-----APDGR 349

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            ++  T+ +G  F IG +       RLL      ++P+++P+G  +I++    G  G   
Sbjct: 350 SIVMVTRVNG-AFRIGQLDLARGVTRLLSRGDLDESPSFAPNGAMVIYA-TIHGHRGVLA 407

Query: 419 YSIDLNGRNETLINTPAYASDPQW 442
            +    G ++ L        +P W
Sbjct: 408 TASVEGGGSQRLTQDSGQVREPAW 431


>gi|118602525|ref|YP_903740.1| TolB domain-containing protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166229990|sp|A1AWG2|TOLB_RUTMC RecName: Full=Protein tolB; Flags: Precursor
 gi|118567464|gb|ABL02269.1| TolB, N-terminal domain protein [Candidatus Ruthia magnifica str.
           Cm (Calyptogena magnifica)]
          Length = 424

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 200/432 (46%), Gaps = 17/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL--GGKVSEVVSKDLQRSD 77
           LLVLI   + T     ++V     + +   I  + F  I +   G  ++ V+  +  RS 
Sbjct: 4   LLVLILSLYTTLAWTVLEVTILKQDENAFPIVISDFSVIGDANQGKIIAHVIRNNFNRSG 63

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F   S  S    I N    P F  W +   + +V G++ K  K    VE  L DV  +K
Sbjct: 64  EF---SASSVNYVINNK---PNFDKWKAKKIEAIVLGKLEKISKKVFNVEIELLDVFSKK 117

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVM 196
            +   KF       R+IAH +SD IY  + GEKG F++R+ ++S  +   G  +  L + 
Sbjct: 118 ILYKDKFVVHNRGIRRIAHYLSDQIYHVLLGEKGSFDTRLAYISVTNKGKGEREYRLEIS 177

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D D  N + +  S+  IL  P +SP+Q K+AY ++ +     V++    + R  +++  F
Sbjct: 178 DSDAQNPQTILKSKKPIL-SPVWSPDQNKIAYVSFKNAR-SEVFIQYPFVRRKTQKLPYF 235

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             +  AP +  NGK  L+++ K+   DIYS  L S    RLT  + I+  ASYS +  +I
Sbjct: 236 DGIASAPSWHPNGKNLLLTLSKNGNKDIYSYQLSSKKLTRLTTDVGIDTEASYSSEGDKI 295

Query: 317 VFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           VF S+R G+ Q+Y+  +++N  ++        A     V+SP    +A     G+ + I 
Sbjct: 296 VFTSNRSGQVQVYIKDLKTNKINRATFKGRYNAK---AVFSPDDKSLAMVHRVGKDYRIA 352

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           ++        ++  +   ++P +SP+G  +IF+  K G +        L  +   L +  
Sbjct: 353 LLDIATKNLTIMTNNQLDESPFFSPNGSMIIFATNK-GSSSVLSVVSILGRQTFELASKA 411

Query: 435 AYASDPQWVGFM 446
               +P W  ++
Sbjct: 412 GEVREPNWSHYL 423


>gi|169632714|ref|YP_001706450.1| tolerance to colicins E2, E, A, and K, required for OM integrity
           [Acinetobacter baumannii SDF]
 gi|169795058|ref|YP_001712851.1| tolerance to colicins E2, E, A, and K, required for OM integrity
           [Acinetobacter baumannii AYE]
 gi|184159156|ref|YP_001847495.1| translocation protein TolB [Acinetobacter baumannii ACICU]
 gi|213158279|ref|YP_002320330.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii AB0057]
 gi|215482607|ref|YP_002324799.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii AB307-0294]
 gi|239501026|ref|ZP_04660336.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii AB900]
 gi|301346653|ref|ZP_07227394.1| translocation protein TolB [Acinetobacter baumannii AB056]
 gi|301596452|ref|ZP_07241460.1| translocation protein TolB [Acinetobacter baumannii AB059]
 gi|332869633|ref|ZP_08438844.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii 6013113]
 gi|332875984|ref|ZP_08443770.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii 6014059]
 gi|169147985|emb|CAM85848.1| tolerance to colicins E2, E, A, and K, required for OM integrity
           [Acinetobacter baumannii AYE]
 gi|169151506|emb|CAP00269.1| tolerance to colicins E2, E, A, and K, required for OM integrity
           [Acinetobacter baumannii]
 gi|183210750|gb|ACC58148.1| Periplasmic component of the Tol biopolymer transport system
           [Acinetobacter baumannii ACICU]
 gi|213057439|gb|ACJ42341.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii AB0057]
 gi|213987558|gb|ACJ57857.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii AB307-0294]
 gi|322509069|gb|ADX04523.1| tolB [Acinetobacter baumannii 1656-2]
 gi|323519050|gb|ADX93431.1| translocation protein TolB [Acinetobacter baumannii TCDC-AB0715]
 gi|332732680|gb|EGJ63912.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii 6013113]
 gi|332735850|gb|EGJ66891.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii 6014059]
          Length = 426

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 186/361 (51%), Gaps = 34/361 (9%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +V  DL RS  F   S++       N     +  DW + G   +VTG+ IK+  D   V 
Sbjct: 57  IVETDLNRSGRFTSSSKNLPANAAINQI---QASDWQAAGIPYVVTGQ-IKQTADGFEVH 112

Query: 128 FRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++L+DV+ ++Q +  +  + PAS  R+  H +SD IYQ++TG  GDF+ RI +V  +  +
Sbjct: 113 YQLYDVQ-KQQYLLNELLNVPASRIRQAGHMVSDAIYQALTGIPGDFSGRIAYVLRNPAT 171

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              + +L + D DG   + +  SRD IL  P ++P+ +K+AY +++ +    +YL D   
Sbjct: 172 PAERYTLQIADTDGEQPKTVLSSRDPIL-SPAWTPDAKKIAYVSFETKRPA-IYLQDLST 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + + +F+ +  AP FS +GK  L +   +   +IY +DL +   +R+TN   I+  
Sbjct: 230 GTR-EVLTSFKGLNGAPSFSPDGKSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSGIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A Y+PD    +F SDR G  Q+Y         KR++       F   ++ +G L A    
Sbjct: 289 ARYTPDGKAFIFTSDRGGSPQIYRYDFGNGSVKRLT-------FKGSFNARGTLSA---- 337

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNL------------QAPTWSPSGRSLIFSRKKDGDT 414
            G+K A+ V +  GS  ++ ++D N             ++P++SP+G+ ++++  ++G+ 
Sbjct: 338 DGKKIAL-VHRPSGSNYKVAIQDINTGIVNILTPTSLDESPSFSPNGQMVVYA-TREGNR 395

Query: 415 G 415
           G
Sbjct: 396 G 396


>gi|193078076|gb|ABO13011.2| tolerance to colicins E2 E, A, and K [Acinetobacter baumannii ATCC
           17978]
          Length = 426

 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 186/361 (51%), Gaps = 34/361 (9%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +V  DL RS  F   S++       N     +  DW + G   +VTG+ IK+  D   V 
Sbjct: 57  IVETDLNRSGRFTSSSKNLPANAAINQI---QASDWQAAGIPYVVTGQ-IKQTADGFEVH 112

Query: 128 FRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++L+DV+ ++Q +  +  + PAS  R+  H +SD IYQ++TG  GDF+ RI +V  +  +
Sbjct: 113 YQLYDVQ-KQQYLLNELLNVPASRIRQAGHIVSDAIYQALTGIPGDFSGRIAYVLRNPAT 171

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              + +L + D DG   + +  SRD IL  P ++P+ +K+AY +++ +    +YL D   
Sbjct: 172 PAERYTLQIADTDGEQPKTVLSSRDPIL-SPAWTPDAKKIAYVSFETKRPA-IYLQDLST 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + + +F+ +  AP FS +GK  L +   +   +IY +DL +   +R+TN   I+  
Sbjct: 230 GTR-EVLTSFKGLNGAPSFSPDGKSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSGIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A Y+PD    +F SDR G  Q+Y         KR++       F   ++ +G L A    
Sbjct: 289 ARYTPDGKAFIFTSDRGGSPQIYRYDFGNGSVKRLT-------FKGSFNARGTLSA---- 337

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNL------------QAPTWSPSGRSLIFSRKKDGDT 414
            G+K A+ V +  GS  ++ ++D N             ++P++SP+G+ ++++  ++G+ 
Sbjct: 338 DGKKIAL-VHRPSGSNYKVAIQDINTGIVNILTPTSLDESPSFSPNGQMVVYA-TREGNR 395

Query: 415 G 415
           G
Sbjct: 396 G 396


>gi|126642629|ref|YP_001085613.1| tolerance to colicins E2 E, A, and K [Acinetobacter baumannii ATCC
           17978]
          Length = 381

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 186/361 (51%), Gaps = 34/361 (9%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +V  DL RS  F   S++       N     +  DW + G   +VTG+ IK+  D   V 
Sbjct: 12  IVETDLNRSGRFTSSSKNLPANAAINQI---QASDWQAAGIPYVVTGQ-IKQTADGFEVH 67

Query: 128 FRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++L+DV+ ++Q +  +  + PAS  R+  H +SD IYQ++TG  GDF+ RI +V  +  +
Sbjct: 68  YQLYDVQ-KQQYLLNELLNVPASRIRQAGHIVSDAIYQALTGIPGDFSGRIAYVLRNPAT 126

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              + +L + D DG   + +  SRD IL  P ++P+ +K+AY +++ +    +YL D   
Sbjct: 127 PAERYTLQIADTDGEQPKTVLSSRDPIL-SPAWTPDAKKIAYVSFETKRPA-IYLQDLST 184

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + + +F+ +  AP FS +GK  L +   +   +IY +DL +   +R+TN   I+  
Sbjct: 185 GTR-EVLTSFKGLNGAPSFSPDGKSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSGIDTE 243

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A Y+PD    +F SDR G  Q+Y         KR++       F   ++ +G L A    
Sbjct: 244 ARYTPDGKAFIFTSDRGGSPQIYRYDFGNGSVKRLT-------FKGSFNARGTLSA---- 292

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNL------------QAPTWSPSGRSLIFSRKKDGDT 414
            G+K A+ V +  GS  ++ ++D N             ++P++SP+G+ ++++  ++G+ 
Sbjct: 293 DGKKIAL-VHRPSGSNYKVAIQDINTGIVNILTPTSLDESPSFSPNGQMVVYA-TREGNR 350

Query: 415 G 415
           G
Sbjct: 351 G 351


>gi|90580127|ref|ZP_01235935.1| translocation protein TolB precursor [Vibrio angustum S14]
 gi|90439012|gb|EAS64195.1| translocation protein TolB precursor [Vibrio angustum S14]
          Length = 442

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 209/446 (46%), Gaps = 23/446 (5%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           + LCL L+ +  F    +   +    +SA   P+ +   ++    +L   +S V++ DLQ
Sbjct: 6   MGLCLALLSVSQFAHAELELVITDGVDSAR--PIGVVPFQWEGEGKLPTDISAVIASDLQ 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           RS  F+ + +    Q   N   I  +  W+ +G   +VTG ++K       V ++L D+ 
Sbjct: 64  RSGKFSPVPESKLPQLPHNESQI-DYSAWSKMGVDAVVTGTIVKNQDGNYTVNYQLVDIV 122

Query: 135 DRKQIIGKKFFSS-------------PASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             K   G +  +              P   R+ AH ISD IYQ +TGE+G F +RI +V 
Sbjct: 123 KGKLAAGTEGAAKGDYLLLNNQASVKPNRMRQYAHRISDLIYQKLTGERGAFLTRIAYVD 182

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++  S      L V D DG N R +  S+ Q L  P +SP+  K+AY +++     ++++
Sbjct: 183 DNR-SSKFPYQLRVADYDGYNERVVLKSK-QPLMSPAWSPDGSKLAYVSFESGKA-QIFV 239

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +D    +  + + ++     +P+FS +G +  + + K  ++ IY  DL++    ++T+  
Sbjct: 240 LDIYTGKR-EVVADYPRHNGSPQFSPDGTKLAMVLSKTGSLQIYIKDLKTKQLRQITHGR 298

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             N  A ++PD   + F SDR G+ Q+Y +     D +R++  + A    P  +P G  +
Sbjct: 299 ANNTEAVWAPDGQSLYFTSDRGGRPQVYHLDLAIGDTQRVTW-QGAQNMGPQITPDGRYL 357

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                S   + I          ++L +    ++P+ +P+G  +I+S  ++  T  +L  +
Sbjct: 358 VVVNRSDSGYNIAKQDLKTGAMQILTKARLAESPSIAPNGSMIIYSSAQNNGT-YELSLV 416

Query: 422 DLNGRNET-LINTPAYASDPQWVGFM 446
            ++GR +  L +T      P W  F+
Sbjct: 417 SIDGRFQARLPSTSKRVRAPSWGPFL 442


>gi|152989051|ref|YP_001349885.1| translocation protein TolB [Pseudomonas aeruginosa PA7]
 gi|150964209|gb|ABR86234.1| Tol-Pal system beta propeller repeat protein TolB [Pseudomonas
           aeruginosa PA7]
          Length = 432

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 202/414 (48%), Gaps = 30/414 (7%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF------NLISQDSFKQKITNPDSIPRF 100
           P+++    F   + L   +S ++  DL+ S  F      N+ISQ +   ++        F
Sbjct: 36  PIAVVPFGFQGGNVLPEDMSNIIGNDLRNSGYFEPLPRQNMISQPAQASEVI-------F 88

Query: 101 QDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD 160
           +DW ++G   ++ G ++  G  RL+V++ L+DV   +Q++      S    R ++H I+D
Sbjct: 89  RDWKAVGVNYVMVGNIVPAGG-RLQVQYALFDVGTEQQVLTGSVTGSTDQLRDMSHYIAD 147

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR---DGANIRYLTPSRDQILFEP 217
             ++ +TG KG F++++L+V+    S  + N+   + R   DGA    L  SR+ I+  P
Sbjct: 148 QSFEKLTGIKGAFSTKMLYVTAERFS--VDNTRYTLQRSDYDGARPVTLLQSREPIV-SP 204

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           RFSP+ +++AY +++ +   R+++      R  ++I NF  +  AP FS +G R    + 
Sbjct: 205 RFSPDGRRIAYVSFEQKRP-RIFIQYVDTGRR-EQITNFEGLNGAPAFSPDGNRLAFVLS 262

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D   +IY +DL S +  RLTN L I+    +  D S + F SDR GK Q+Y M  +   
Sbjct: 263 RDGNPEIYVMDLGSRSLRRLTNNLAIDTEPFWGKDGSTLYFTSDRGGKPQIYKMNVSSGA 322

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             R++     +    + + +  L+   +  G   F I          R+L   +   +PT
Sbjct: 323 VDRVTFIGNYNANPKLSADEKTLVMVHRQQGYTNFQIAAQDLQRGNLRVLSNTTLDDSPT 382

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFMD 447
            +P+G  LI++ ++  D G  L  + +NGR    I  P    D   P W  +++
Sbjct: 383 VAPNGTMLIYATRQQ-DRGV-LMLVSINGR--VRIPLPTAQGDVREPSWSPYLN 432


>gi|88861314|ref|ZP_01135945.1| outer membrane protein [Pseudoalteromonas tunicata D2]
 gi|88816693|gb|EAR26517.1| outer membrane protein [Pseudoalteromonas tunicata D2]
          Length = 451

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 213/436 (48%), Gaps = 46/436 (10%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
            LCLL+     F   ++  F+    NSA   P+ +   K++ + +  G +S+V++ DL+R
Sbjct: 10  GLCLLIASSQLF--AALEIFITEGVNSAR--PIGVVPFKYIGVGQAPGDISDVIAADLRR 65

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  FN I+  +  QK +  D    +  W   G + +V G++ ++   R  V + L DV  
Sbjct: 66  SGKFNPIATINMPQKPSK-DGEVDYGAWAQEGIEAIVVGQIEQQTGGRYLVSYELIDVL- 123

Query: 136 RKQIIG---------------------KKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           R Q+ G                     ++   +  S+R+  H ISD +Y+++TGE+G F 
Sbjct: 124 RGQLTGGQTQMLSNGKLVNNQDHILDARQTVITDDSFRRYGHRISDVVYEALTGERGAFL 183

Query: 175 SRILFVSESVVSGIIKN------SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           +++ +V       I+++       L V D DG N + L  S++  L  P +SP+  K+AY
Sbjct: 184 TKVAYV-------IVRDDQAMPYQLVVADYDGYNEQVLLRSKEP-LMSPDWSPDGTKLAY 235

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG-KRALI-SVQKDEAMDIYS 286
            T+++    ++Y+ D    +  +R+ +   +  AP+FS +G K AL+ S  KD A +IY 
Sbjct: 236 VTFENRQS-QIYIQDIYTGKR-ERLTSHPGINGAPKFSPDGTKLALVLSKDKDGATEIYV 293

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +DL++ A  R+T    I+   S+ P+  +IVF S+R G  Q+Y +       +R++ D +
Sbjct: 294 MDLKTRAERRVTRHRSIDTEPSWHPNGQEIVFTSERGGNAQIYSVNLATGKTRRLTFDGD 353

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +    +     DLI   + +G ++ +   +      ++L      ++P+ +P+G  +I+
Sbjct: 354 MNLAGSITPDGKDLIMVNRTAG-RYHLAKKELKTGDFQVLTATRLDESPSMAPNGSMIIY 412

Query: 407 SRKKDGDTGSKLYSID 422
           S   D      L S+D
Sbjct: 413 STLHDNKQVLALVSMD 428



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 3/129 (2%)

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           ++   D+    QL V   +G +++ + + KE     P WSP G  +A+  F   +  I +
Sbjct: 189 VIVRDDQAMPYQLVVADYDGYNEQVLLRSKE-PLMSPDWSPDGTKLAYVTFENRQSQIYI 247

Query: 376 MK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                G +ERL        AP +SP G  L     KD D  +++Y +DL  R E  +   
Sbjct: 248 QDIYTGKRERLTSHPGINGAPKFSPDGTKLALVLSKDKDGATEIYVMDLKTRAERRVTRH 307

Query: 435 -AYASDPQW 442
            +  ++P W
Sbjct: 308 RSIDTEPSW 316


>gi|299769115|ref|YP_003731141.1| translocation protein TolB [Acinetobacter sp. DR1]
 gi|298699203|gb|ADI89768.1| translocation protein TolB [Acinetobacter sp. DR1]
          Length = 426

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 187/364 (51%), Gaps = 34/364 (9%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S +V  DL RS  F   S++       N     +  DW + G   +VTG+ IK+     
Sbjct: 54  LSPIVETDLNRSGRFTSSSKNLPANAAINQI---QASDWQAAGIPYVVTGQ-IKQTATGF 109

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            V ++L+DV+ ++Q I  +  + PAS  R+  H +SD IYQ++TG  GDF+ RI +V  +
Sbjct: 110 EVHYQLYDVQ-KQQYILNELLNVPASRIRQAGHMVSDAIYQALTGIPGDFSGRIAYVLRN 168

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             +   + +L + D DG   + +  SRD IL  P ++P+ +K+AY +++ +    +YL D
Sbjct: 169 PATAAERYTLQIADTDGEQPKTVLSSRDPIL-SPAWTPDAKKIAYVSFETKRPA-IYLQD 226

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  + + +F+ +  AP FS +G+  L +   +   +IY +DL +   +R+TN   I
Sbjct: 227 LSTGTR-EVLTSFKGLNGAPSFSPDGQSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSAI 285

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +  A Y+PD    +F SDR G  Q+Y         KR++       F   ++ +G L A 
Sbjct: 286 DTEARYTPDGKSFIFTSDRGGSAQIYRYTFADGSVKRLT-------FKGSFNARGTLSA- 337

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNL------------QAPTWSPSGRSLIFSRKKD 411
               G+K A+ V +  GS  ++ ++D N             ++P++SP+G+ ++++  ++
Sbjct: 338 ---DGKKIAL-VHRPSGSSYKVAIQDINTGITNILTPTSLDESPSFSPNGQMVVYA-TRE 392

Query: 412 GDTG 415
           G+ G
Sbjct: 393 GNRG 396


>gi|262278152|ref|ZP_06055937.1| tolerance protein to colicins E2 [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258503|gb|EEY77236.1| tolerance protein to colicins E2 [Acinetobacter calcoaceticus
           RUH2202]
          Length = 426

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 205/419 (48%), Gaps = 37/419 (8%)

Query: 11  LNMKINLCLLLVLIGGFFP-TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           +N      L L LI    P  S  AF ++    A  +P        V  +   G +S +V
Sbjct: 1   MNTSRKHLLSLALITALSPLASTTAFAQLYLEIAK-APDQAPKIAIVPFNNDNG-LSPIV 58

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
             DL RS  F   S++       N     +  DW + G   +VTG+ IK+      V ++
Sbjct: 59  ETDLNRSGRFTSSSKNLPANAAINQI---QASDWQAAGIPYVVTGQ-IKQTATGFEVHYQ 114

Query: 130 LWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           L+DV+ ++Q I  +  + PAS  R+  H +SD IYQ++TG  GDF+ RI +V  +  +  
Sbjct: 115 LYDVQ-KQQYILNELLNVPASRIRQAGHMVSDSIYQALTGIPGDFSGRIAYVLRNPATPA 173

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            + +L + D DG   + +  SRD IL  P ++P+ +K+AY +++ +    +YL D     
Sbjct: 174 ERYTLQIADTDGEQPKTVLSSRDPIL-SPAWTPDAKKIAYVSFETKRPA-IYLQDLSTGT 231

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             + + +F+ +  AP FS +G+  L +   +   +IY +DL +   +R+TN   I+  A 
Sbjct: 232 R-EVLTSFKGLNGAPSFSPDGQSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSAIDTEAR 290

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           Y+PD    +F SDR G  Q+Y         KR++       F   ++ +G L A     G
Sbjct: 291 YTPDGKSFIFTSDRGGSAQIYRYTFADGSVKRLT-------FKGSFNARGTLSA----DG 339

Query: 369 EKFAIGVMKKDGSQERLLVEDSNL------------QAPTWSPSGRSLIFSRKKDGDTG 415
           +K A+ V +  GS  ++ ++D N             ++P++SP+G+ ++++  ++G+ G
Sbjct: 340 KKIAL-VHRPSGSSYKVAIQDINTGITNILTPTSLDESPSFSPNGQMVVYA-TREGNRG 396


>gi|330502225|ref|YP_004379094.1| translocation protein TolB [Pseudomonas mendocina NK-01]
 gi|328916511|gb|AEB57342.1| translocation protein TolB [Pseudomonas mendocina NK-01]
          Length = 432

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 217/440 (49%), Gaps = 17/440 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           ++I L  L++L+G     S+ A   + ++  +   +P+++    +     L   +S+++ 
Sbjct: 5   IRIALLGLVMLVG-----SVQAADPLVISQGADRATPIAVVPFGWQGGSVLPEDMSQIIG 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  F  I + +     T    +  ++DW +LGAQ ++ G ++  G  RL+V++ L
Sbjct: 60  NDLRNSGYFEPIPRQNMISLPTQASEV-IYRDWKALGAQYVLVGNIVPNG-GRLQVQYAL 117

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGII 189
           ++V   +Q++           R +AH I+D  ++ +TG KG F++R+L+V+ E + +   
Sbjct: 118 FNVNTEQQVMTGNVGGGTDQLRDMAHHIADQSFEKLTGVKGAFSTRLLYVTAERMGANNT 177

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ IL  P F+P+ +++AY +++     R+++      R 
Sbjct: 178 RYTLQRSDYDGARAVTLLQSREPIL-SPSFAPDGRRIAYVSFEQRRP-RIFVQHIDTGRR 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G R    + +D   +IY +D+ S    R+TN   I+    +
Sbjct: 236 -EQITNFEGLNGAPAWSPDGNRLAFVLSRDGNPEIYVMDMGSRQMRRITNHYAIDTEPFW 294

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG- 368
             D   + F SDR G+ Q+Y    N    +R++     +    + + +  L+   +  G 
Sbjct: 295 GKDGQTLYFTSDRAGRPQIYKTNINSGAVERVTFVGNYNANPKLSADEKTLVMIHRQDGF 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             F +     + ++ R+L + S  ++PT +P+G  LI++ ++ G     L S   NGR  
Sbjct: 355 TVFKVAAQDLETNRLRILSDTSLDESPTVAPNGTMLIYATRQQGRGVLMLAST--NGRVR 412

Query: 429 TLINTP-AYASDPQWVGFMD 447
             + T      +P W  +++
Sbjct: 413 LPLPTAQGEVREPSWSPYLN 432


>gi|146306309|ref|YP_001186774.1| translocation protein TolB [Pseudomonas mendocina ymp]
 gi|145574510|gb|ABP84042.1| TolB, N-terminal domain protein [Pseudomonas mendocina ymp]
          Length = 432

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/440 (24%), Positives = 217/440 (49%), Gaps = 17/440 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           ++I L  L++L+G     S+ A   + ++  +   +P+++    +     L   +S+++ 
Sbjct: 5   IRIALLGLVMLVG-----SVQAADPLVISHGADRATPIAVVPFGWQGGSVLPEDMSQIIG 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  F  I + +     T    +  ++DW +LGAQ ++ G ++  G  RL+V++ L
Sbjct: 60  NDLRNSGYFEPIPRQNMISLPTQASEV-IYRDWKALGAQYVLVGNIVPNG-GRLQVQYAL 117

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGII 189
           ++V   +Q++           R +AH I+D  ++ +TG KG F++R+L+V+ E + +   
Sbjct: 118 FNVNTEQQVMTGNVGGGTDQLRDMAHHIADQSFEKLTGVKGAFSTRLLYVTAERMGANNT 177

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ IL  P F+P+ +++AY +++     R+++      R 
Sbjct: 178 RYTLQRSDYDGARAVTLLQSREPIL-SPSFAPDGRRIAYVSFEQRRP-RIFVQHIDTGRR 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G R    + +D   +IY +D+ S    R+TN   I+    +
Sbjct: 236 -EQITNFEGLNGAPAWSPDGNRLAFVLSRDGNPEIYVMDMGSRQMRRITNHYAIDTEPFW 294

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG- 368
             D   + F SDR G+ Q+Y    N    +R++     +    + + +  L+   +  G 
Sbjct: 295 GKDGQTLYFTSDRAGRPQIYKTNINSGAVERVTFVGNYNANPKLSADEKTLVMIHRQDGF 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             F +     + ++ R+L + S  ++PT +P+G  LI++ ++ G     L S   NGR  
Sbjct: 355 TVFKVAAQDLETNRLRILSDTSLDESPTVAPNGTMLIYATRQQGRGVLMLAST--NGRVR 412

Query: 429 TLINTP-AYASDPQWVGFMD 447
             + T      +P W  +++
Sbjct: 413 LPLPTAQGEVREPSWSPYLN 432


>gi|293609864|ref|ZP_06692166.1| hypothetical protein HMPREF0013_02014 [Acinetobacter sp. SH024]
 gi|292828316|gb|EFF86679.1| hypothetical protein HMPREF0013_02014 [Acinetobacter sp. SH024]
 gi|325123092|gb|ADY82615.1| tolerance to colicins E2, E, A, and K, required for OM integrity
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 426

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 204/421 (48%), Gaps = 41/421 (9%)

Query: 11  LNMKINLCLLLVLIGGFFP-TSIHAFVKV---ATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +N      L L LI    P  S  AF ++      + + +P  IA   F + + L     
Sbjct: 1   MNTSRKHLLSLALITALSPIASTTAFAQLYLEIAKAPDQAP-KIAIVPFTNDNGL----Y 55

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F   S++       N     +  DW + G   +VTG+ IK+      V
Sbjct: 56  PIVETDLNRSGRFTSSSKNLPANAAINQI---QASDWQAAGIPYVVTGQ-IKQTATGFEV 111

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            ++L+DV+ ++ I+ +      A  R+  H +SD IYQ++TG  GDF+ RI +V  +  +
Sbjct: 112 HYQLYDVQKQQYILNELLNVPAARIRQAGHMVSDAIYQALTGIPGDFSGRIAYVLRNPAT 171

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              + +L + D DG   + +  SRD IL  P ++P+ +K+AY +++ +    +YL D   
Sbjct: 172 PAERYTLQIADTDGEQPKTVLSSRDPIL-SPAWTPDAKKIAYVSFETKRPA-IYLQDLST 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + + +FR +  AP FS +G+  L +   +   +IY +DL +   +R+TN   I+  
Sbjct: 230 GTR-EVLTSFRGLNGAPSFSPDGQSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSAIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A Y+PD    +F SDR G  Q+Y         KR++       F   ++ +G L A    
Sbjct: 289 ARYTPDGKSFIFTSDRGGSAQIYRYTFADGSVKRLT-------FKGSFNARGTLSA---- 337

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNL------------QAPTWSPSGRSLIFSRKKDGDT 414
            G+K A+ V +  GS  ++ ++D N             ++P++SP+G+ ++++  ++G+ 
Sbjct: 338 DGKKIAL-VHRPSGSSYKVAIQDINTGITNILTPTSLDESPSFSPNGQMVVYA-TREGNR 395

Query: 415 G 415
           G
Sbjct: 396 G 396


>gi|317051744|ref|YP_004112860.1| TolB protein [Desulfurispirillum indicum S5]
 gi|316946828|gb|ADU66304.1| TolB protein [Desulfurispirillum indicum S5]
          Length = 452

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 198/405 (48%), Gaps = 21/405 (5%)

Query: 48  VSIAFTKFVSIDELGGKVSE----VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW 103
           + IA   F S + L  +  E    ++ +DL  + +  ++ ++++  +   PD    ++DW
Sbjct: 54  IPIAIPTFTSDNSLSAEFRENMRALILEDLSYAGIIKVLPREAYLAEPGRPDV--NYEDW 111

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
             +GA+ + +  +   G   LR E  ++D+  +++   + F  +   +  +AH ++D I 
Sbjct: 112 LFIGAEFMASVSLFSTGT-HLRAEVAVYDMAMKRKKSKQSFEIAFDRYVTLAHRLADHIL 170

Query: 164 QSITGEKGDFNSRILFVSESVVSG-IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
             ++G +G F +RI FVS+   S   +  ++  MD DG+N++ +T + D I   P F  +
Sbjct: 171 YEVSGVQGFFEARIAFVSDRTSSANAVSKNIYAMDFDGSNLQPVT-TNDSININP-FWHS 228

Query: 223 QQKVAYATY--DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
             KVA+ +Y     +IL   L   R        G     I +P    +GK   ++   + 
Sbjct: 229 MSKVAFTSYIRQRPEILLRDLQSGRTALLAAFGGTNTGGIPSP----DGKYIAVTASHNG 284

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             +IY +        +LT    I++S ++SPD + I F SDR G  Q+Y++     +  R
Sbjct: 285 ISNIYLLHSDGRMYRQLTRHWSIDVSPAWSPDGNFIAFVSDRPGSPQVYMINLRTDEITR 344

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSP 399
           ++ +   +   PVWSP G+ IA+T     KF I +++KDG + +RL     + + P WS 
Sbjct: 345 VTYEGRYN-VSPVWSPDGNYIAYTSLEENKFNIYIVEKDGYNPQRLTYNSGHNETPRWSR 403

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWV 443
            G  L+F+  + G+   KLY +D  G   + L + PA  + P WV
Sbjct: 404 DGNYLLFTSNRTGEF--KLYVMDRTGTFQKRLKDGPANNNMPDWV 446


>gi|260551455|ref|ZP_05825639.1| tolerance to colicins E2 [Acinetobacter sp. RUH2624]
 gi|260405449|gb|EEW98942.1| tolerance to colicins E2 [Acinetobacter sp. RUH2624]
          Length = 426

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/361 (28%), Positives = 185/361 (51%), Gaps = 34/361 (9%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +V  DL RS  F   S++       N     +  DW   G   +VTG+ IK+  D   V 
Sbjct: 57  IVETDLNRSGRFTSSSKNLPANAAINQI---QASDWQVAGIPYVVTGQ-IKQTADGFEVH 112

Query: 128 FRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++L+DV+ ++Q +  +  + PAS  R+  H +SD IYQ++TG  GDF+ RI +V  +  +
Sbjct: 113 YQLYDVQ-KQQYLLNELLNVPASRIRQAGHMVSDAIYQALTGIPGDFSGRIAYVLRNPAT 171

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              + +L + D DG   + +  SRD IL  P ++P+ +K+AY +++ +    +YL D   
Sbjct: 172 PAERYTLQIADTDGEQPKTVLSSRDPIL-SPAWTPDAKKIAYVSFETKRPA-IYLQDLST 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + + +F+ +  AP FS +GK  L +   +   +IY +DL +   +R+TN   I+  
Sbjct: 230 GTR-EVLTSFKGLNGAPSFSPDGKSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSGIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A Y+PD    +F SDR G  Q+Y         KR++       F   ++ +G L A    
Sbjct: 289 ARYTPDGKAFIFTSDRGGSPQIYRYDFGDGSVKRLT-------FKGSFNARGTLSA---- 337

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNL------------QAPTWSPSGRSLIFSRKKDGDT 414
            G+K A+ V +  GS  ++ ++D N             ++P++SP+G+ ++++  ++G+ 
Sbjct: 338 DGKKIAL-VHRPSGSNYKVAIQDINTGIVNILTPTSLDESPSFSPNGQMVVYA-TREGNR 395

Query: 415 G 415
           G
Sbjct: 396 G 396


>gi|50085692|ref|YP_047202.1| translocation protein TolB [Acinetobacter sp. ADP1]
 gi|67461952|sp|Q6F985|TOLB_ACIAD RecName: Full=Protein tolB; Flags: Precursor
 gi|49531668|emb|CAG69380.1| tolerance to colicins E2, E, A, and K, required for OM integrity
           [Acinetobacter sp. ADP1]
          Length = 425

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 178/350 (50%), Gaps = 26/350 (7%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLR 125
           +V  DL RS  F+  S++     +    SI   Q   W + G   +V G +     +   
Sbjct: 55  IVENDLNRSGRFSSASKN-----LPTTASIDAIQASAWQAAGIPYVVVGNLKPAANNAFE 109

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           V ++L+DV+ ++Q +  +  + PAS  R+ AH ISD IYQ++TG  GDF+ RI +V  + 
Sbjct: 110 VHYQLYDVQ-KQQYLLNEVLTVPASRVRQAAHMISDAIYQALTGIAGDFSGRIAYVLRNP 168

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +   + +L + D DG   + +  SRD IL  P ++P+ +K+AY +++ +    +YL D 
Sbjct: 169 ATPDQRYTLQIADTDGEQPKTVLSSRDPIL-SPAWTPDAKKIAYVSFETKRPA-IYLQDL 226

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  + + +F+ +  AP FS +GK  L +   +   +IY +DL +   +R+TN   I+
Sbjct: 227 ATGQR-EVLASFKGLNGAPSFSPDGKSMLFTASMNGNPEIYQMDLSTRQLQRMTNDNAID 285

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-- 362
             A Y+PD    +F SDR G  Q+Y    + S  KR++       F   ++ +G L A  
Sbjct: 286 TEARYAPDGKSFIFTSDRGGSPQIYRYSFDDSSTKRLT-------FRGAFNARGTLSADG 338

Query: 363 -----FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                  + SG  + + +M        +L   S  ++P++SP+G+ ++++
Sbjct: 339 KNIALVHRPSGSNYKVAIMNISTGIVNILTPTSLDESPSFSPNGQMVVYA 388



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 14/125 (11%)

Query: 326 EQLYVMQ---SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +Q Y +Q   ++G   K +   ++     P W+P    IA+  F  ++ AI +      Q
Sbjct: 172 DQRYTLQIADTDGEQPKTVLSSRD-PILSPAWTPDAKKIAYVSFETKRPAIYLQDLATGQ 230

Query: 383 ERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR------NETLINTPA 435
             +L     L  AP++SP G+S++F+   +G+   ++Y +DL+ R      N+  I+T A
Sbjct: 231 REVLASFKGLNGAPSFSPDGKSMLFTASMNGN--PEIYQMDLSTRQLQRMTNDNAIDTEA 288

Query: 436 -YASD 439
            YA D
Sbjct: 289 RYAPD 293


>gi|51246264|ref|YP_066148.1| TolB protein [precursor] [Desulfotalea psychrophila LSv54]
 gi|67461948|sp|Q6AKI4|TOLB_DESPS RecName: Full=Protein tolB; Flags: Precursor
 gi|50877301|emb|CAG37141.1| related to TolB protein [Precursor] [Desulfotalea psychrophila
           LSv54]
          Length = 438

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 198/405 (48%), Gaps = 27/405 (6%)

Query: 48  VSIAFTKFVSIDELGGK------VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ 101
           + +A   F +  E G K      +++ V+K L+   + ++I    +K + T         
Sbjct: 51  IKVAVPWFTNTGEGGMKARIAKDIADTVAKALKFHGIISIIPTSEYKGRQT--------A 102

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
           DW  LGA   V G   K    ++++E RL DV +   I+GK +  S +    +     D 
Sbjct: 103 DWAKLGADYAVLGSY-KMFPKKIKLEIRLLDVAENNIILGKSYKGSMSQQNPMIFKFCDA 161

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
             +S+TG +G  +SRI FVS    +      + + D  G  IR +T   + ++  PRF+ 
Sbjct: 162 AIKSLTGTEGIASSRIAFVSYEKRT----KDVFMTDILGRRIRQVT-RHNNLVVSPRFTR 216

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   ++Y++Y      ++Y+ D R  +  K +   + M LAP ++ +GK  ++++ K  A
Sbjct: 217 DGNFLSYSSYHSGS-QKLYITDLRQAKITKSLSRRKGMNLAPTWAPDGKSCILTLSKYGA 275

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            D++ ++ Q    E+LT+   +N+S +YS D   IVF SDR G+ QLY+M+      KR+
Sbjct: 276 PDLFRINQQGKILEQLTSRAGVNVSPTYSADGRHIVFVSDRSGRPQLYLMELETKQTKRL 335

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVED-SNLQAPTWSP 399
           + D   +  +P WSP  + IA++      + I  +     +  + L  D +  ++P WSP
Sbjct: 336 TYDGREN-AEPNWSPVENKIAYSSLRDGLYQIFTLDPFSAAPPKQLTSDLTRHESPVWSP 394

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWV 443
            G  ++F+ + DG    ++Y+I  NG  +  + + P   S  +W 
Sbjct: 395 DGNQILFT-QYDGRR-QQIYAIMKNGSYQRRVFSFPGSQSSARWA 437


>gi|254429692|ref|ZP_05043399.1| Tol-Pal system beta propeller repeat protein TolB [Alcanivorax sp.
           DG881]
 gi|196195861|gb|EDX90820.1| Tol-Pal system beta propeller repeat protein TolB [Alcanivorax sp.
           DG881]
          Length = 434

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 203/434 (46%), Gaps = 8/434 (1%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
           K+   + + L+   +  +  A + +         V IA   F         VS++V  DL
Sbjct: 8   KVWTQISIALMAALWMVNAQAELLIKVTEGRVDAVPIAVVPFDGAQNAPEDVSQIVQADL 67

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  F  +  +    +  N   +  ++D+  LG + ++TG +  +      V + L+DV
Sbjct: 68  HRSGQFKPLPPEDMLSRPRNEQEM-IYRDFKVLGTEYVITGSMKAQETGGYEVSYALFDV 126

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
             +K+++ + +    +  R +AH ISD IY+ +TG  G F+++IL+V+ +         L
Sbjct: 127 ARQKKLMSETYRPPESQLRDVAHAISDRIYEQLTGIPGAFSTKILYVTHNRHDA-NPYQL 185

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
              D DG  +  +  S++ I+  P +SP+ +K+AY +++D+    +Y+         +++
Sbjct: 186 QYADADGHRVTTILRSKEPIM-SPTWSPDGRKIAYVSFEDQGRPAIYIHSLATTER-EKV 243

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +F  +  AP +S +G++  +++ +D   +IY ++L +    RLTN   I+    + PD 
Sbjct: 244 SSFSGINGAPDWSPDGQKLALTLSRDGNPEIYMLNLSTKGLTRLTNNYGIDTEPRWLPDG 303

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +VF S R G  Q+Y +  N    +R+S     +    V +P G  + +       F +
Sbjct: 304 EHLVFTSSRSGGPQIYKLNINDKSVRRVSFQGAYNARSDV-TPDGRYLVYVHRRNGNFNV 362

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LIN 432
           GV         ++      ++P+ +P+G  +I+   + G TG  L ++ ++GR +  L +
Sbjct: 363 GVQDLQRGTFNIVTRTDMDESPSVAPNGSMVIYG-TQHGGTGV-LEAVSIDGRVKVELPS 420

Query: 433 TPAYASDPQWVGFM 446
                 +P W  F+
Sbjct: 421 KEGEVREPAWSPFL 434


>gi|312962753|ref|ZP_07777241.1| TolB [Pseudomonas fluorescens WH6]
 gi|311282970|gb|EFQ61563.1| TolB [Pseudomonas fluorescens WH6]
          Length = 426

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 208/424 (49%), Gaps = 28/424 (6%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF------NLISQDSFKQ 89
           + V + S   +P+++    +     L   ++++VS DL+ S  +      N+ISQ +   
Sbjct: 19  ILVTSGSDRATPIAVVPFGWQGGSVLPDDMAQIVSDDLRNSGYYAPIPKGNMISQPNQAS 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
           ++        F+DW ++GAQ L+ G +   G  RL++ + L++V   +Q++      +  
Sbjct: 79  EVV-------FRDWKAVGAQYLMVGNITPAG-GRLQITYTLFNVATEQQVLTGSVSGTAE 130

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR---DGANIRYL 206
             R +AH ISD  ++ +TG KG F++R+L+V+    S  + N+   + R   DGA    L
Sbjct: 131 QLRDMAHYISDQSFEKLTGIKGAFSTRLLYVTAERFS--VDNTRYTLQRSDYDGARAVTL 188

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             SR+ IL  PRF+P+ +++AY +++ +   R+++      R  ++I NF  +  AP +S
Sbjct: 189 LQSREPIL-SPRFAPDGKRIAYVSFEQKR-PRIFVQHIDTGRR-EQITNFEGLNGAPAWS 245

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G R    + KD   DIY +++ S    R+T+   IN    +  D S I F SDR GK 
Sbjct: 246 PDGSRLAFVLSKDGNPDIYVMNMASRQITRVTSGPGINTEPFWGKDGSTIYFTSDRGGKP 305

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERL 385
           Q+Y     G   +R++     +    + + +  L+   +  G   F +          ++
Sbjct: 306 QIYKTSVGGGGAERVTFIGNYNANPKLSADEKTLVMIHRQDGFTNFRVAAQDLQRGTVKI 365

Query: 386 LVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWV 443
           L  D+NL ++ T +P+G  +I++ ++ G     L  + +NGR    + T      +P W 
Sbjct: 366 LT-DTNLDESATVAPNGTMVIYATRQQGR--GVLMLVSINGRVRLPLPTAQGEVREPSWS 422

Query: 444 GFMD 447
            +++
Sbjct: 423 PYLN 426


>gi|310823648|ref|YP_003956006.1| protein TolB [Stigmatella aurantiaca DW4/3-1]
 gi|309396720|gb|ADO74179.1| Protein TolB [Stigmatella aurantiaca DW4/3-1]
          Length = 424

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 205/404 (50%), Gaps = 33/404 (8%)

Query: 38  VATNSANYSPVSIAFTKFVSIDELGGKVS----EVVSKDLQRSDVFNLISQDSF----KQ 89
           +  + AN+ P+ +A+   + +D+ G K S    E    DL+ S +F ++ + SF    K+
Sbjct: 22  IQISGANFRPLPLAYPAPLPVDDGGKKSSADFDEPFLFDLRASGLFQVLDRASFTADAKE 81

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
            IT   SI  F  W+ +GA+ LV  ++  EG   LR E RL++V   ++          +
Sbjct: 82  GITA-GSI-NFTRWSDVGAESLVKVQLGAEGGT-LRGELRLFNVGSGREDFKASHAVPTS 138

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
             R++AH ++D +Y+ +T E   F SRI+FV ++  +      +   D DG N R LT  
Sbjct: 139 EPRQLAHFLADALYRHLTREPSPFLSRIVFVRKARDN----RDVWTADWDGNNARALTTG 194

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              +L  P   P+   VA+ +Y       +YL     +  P  I     M     FS +G
Sbjct: 195 GINLL--PALGPD-GTVAFTSY-RRGQPDLYLQKEGGEARP--IVQNGQMATGVAFSPDG 248

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQL 328
           KR   +  + E+  IY  ++  +  +R+T+T + IN S S+SPD  ++ F S+R G  Q+
Sbjct: 249 KRIAYAQAQGESTQIYVANVDGSDAKRITDTPYGINSSPSWSPDGKRLAFVSNRGGSPQI 308

Query: 329 YVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQE 383
           YVM  +G++ +R++   + +Y   P WSP+GDLIAFT    + + + F + V    G   
Sbjct: 309 YVMNVDGTNARRLT--FQGNYNQTPDWSPRGDLIAFTARDERNAFDLFTVNV--DTGKIT 364

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           RL  + SN + P +SP+GR ++FS  + G    +L+ +   G N
Sbjct: 365 RLTQDQSNNEEPVFSPNGRLILFSSTRTGT--PQLFVMTAEGNN 406



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 10/168 (5%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V + DG++ + +T +   I   P +SP+ +++A+ + +     ++Y+M+     A +R
Sbjct: 263 IYVANVDGSDAKRITDTPYGINSSPSWSPDGKRLAFVS-NRGGSPQIYVMNVDGTNA-RR 320

Query: 253 I---GNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           +   GN+      P +S  G   A  +  +  A D+++V++ +    RLT     N    
Sbjct: 321 LTFQGNYNQT---PDWSPRGDLIAFTARDERNAFDLFTVNVDTGKITRLTQDQSNNEEPV 377

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +SP+   I+F S R G  QL+VM + G++   +   K      P W+P
Sbjct: 378 FSPNGRLILFSSTRTGTPQLFVMTAEGNNPLALPMGKGGG-LTPDWAP 424


>gi|330721823|gb|EGG99797.1| tolB protein precursor2C [gamma proteobacterium IMCC2047]
          Length = 432

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 200/415 (48%), Gaps = 11/415 (2%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVSKD 72
           +    +L+++ G    +  +F    T   + +P   A   F       L   ++++VS D
Sbjct: 6   LRFTFVLLMVAGLLRPAWASFEIEITQGVD-NPTRFAAVPFGWQGAGLLPEDIAQIVSAD 64

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L RS  F  + Q +     T  D +  ++DW  L  + L+ G+V        RV + L+D
Sbjct: 65  LSRSGQFVALDQRNMMSLPTRADQV-YYRDWRILNQEFLLIGQVTPHANGGYRVHYELYD 123

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKN 191
           V  +++++     + P   R  AH ISD IY+ +TG KG F++RI +V+ +   +G  + 
Sbjct: 124 VYKQQRMVEGNIKAGPNELRDAAHLISDRIYERLTGIKGAFSTRIAYVTVDRPANGAERV 183

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V D DG   + +  SR+ I+  P +SP+  K+AY +++      VY+ D    +  +
Sbjct: 184 RLLVADADGYREKIIRESREPIM-SPHWSPDGNKLAYVSFEGRRPA-VYIQDVSTGKR-Q 240

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           ++  FR +  AP +S +G++  +++ KD   +IY  D+ +   +R+T    I+   S+S 
Sbjct: 241 KVPAFRGINSAPAWSPDGRKLAMTLSKDGNPEIYIYDIATGKFQRVTRHFGIDTEPSWSA 300

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   ++F S R GK Q+Y  +      +R++ + + +    + S  G  +         F
Sbjct: 301 DGKSLIFTSSRGGKPQIYRKEIQTGRLERLTFEGDYNARGRL-SADGRYLVMVHRQAGVF 359

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            I V      + R+L +    ++P+ +P+G  +I++   D + G  L  + L+GR
Sbjct: 360 HIAVQDLKRDRLRVLTQTQLDESPSIAPNGSMIIYA-TNDNNKGI-LAFVSLDGR 412


>gi|70732083|ref|YP_261839.1| translocation protein TolB [Pseudomonas fluorescens Pf-5]
 gi|119371050|sp|Q4K7E4|TOLB_PSEF5 RecName: Full=Protein tolB; Flags: Precursor
 gi|68346382|gb|AAY93988.1| tolB protein [Pseudomonas fluorescens Pf-5]
          Length = 433

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 207/418 (49%), Gaps = 16/418 (3%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           + V + S   +P+++    +     L   +++++  DL+ S  +  I + +     T   
Sbjct: 26  ILVTSGSDRATPIAVVPFGWQGGSVLPDDMAQIIGDDLRNSGYYAPIPKQNMISLPTQAS 85

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
            +  F+DW +LGAQ ++ G ++  G  RL+V++ L++V   +Q++      S    R ++
Sbjct: 86  EV-IFRDWKALGAQYVMVGSIVPAG-GRLQVQYALFNVATEQQVLTGSVSGSVDQLRDMS 143

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR---DGANIRYLTPSRDQ 212
           H ISD  ++ +TG KG F++R+L+V+    S  + N+   + R   DGA    L  SR+ 
Sbjct: 144 HYISDQSFEKLTGIKGAFSTRLLYVTAERFS--VNNTRYTLQRSDYDGARAVTLLQSREP 201

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           IL  PRF+P+ +++AY +++ +   R+++      R  ++I NF  +  AP +S +G R 
Sbjct: 202 IL-SPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGRR-EQITNFEGLNGAPAWSPDGTRL 258

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
              + KD   DIY +++ S    R+T+   IN    +  D S I F SDR GK Q+Y   
Sbjct: 259 AFVLSKDGNPDIYVMNMASRQISRVTSGPGINTEPFWGKDGSTIYFTSDRGGKPQVYKSN 318

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSN 391
            NG   +R++     +    + + +  L+   +  G   F +          ++L  D+N
Sbjct: 319 INGGGAERVTFIGNYNANPKLSADEKTLVMIHRQDGFTNFRVAAQDLQRGSVKILT-DTN 377

Query: 392 L-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFMD 447
           L ++ T +P+G  +I++ ++ G     L  + +NGR    + T      +P W  +++
Sbjct: 378 LDESATVAPNGTMVIYATRQQGR--GVLMLVSINGRVRLPLPTAQGEVREPSWSPYLN 433


>gi|330445541|ref|ZP_08309193.1| tol-Pal system beta propeller repeat protein TolB [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489732|dbj|GAA03690.1| tol-Pal system beta propeller repeat protein TolB [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 442

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 207/446 (46%), Gaps = 23/446 (5%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           + LCL L+ +  F   ++   +    +SA   P+ +   ++    +L   +S V++ DLQ
Sbjct: 6   MGLCLALLSVSQFANAALELVITDGVDSAR--PIGVVPFQWEGEGKLPTDISAVIASDLQ 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           RS  F+ +  +   Q   N   I  +  W+ +G   +VTG + K       V ++L D+ 
Sbjct: 64  RSGKFSPVPTNKLPQLPHNESQI-DYSAWSKMGVDAVVTGTIAKNPDGTYTVNYQLVDIV 122

Query: 135 DRKQIIGKKFFSS-------------PASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             K   G +  +              P   R+ AH ISD IYQ +TGE+G F +RI +V 
Sbjct: 123 KGKLAAGTEGAAKGDYLLLNNQASVKPNRMRQYAHRISDLIYQKLTGERGAFLTRIAYVD 182

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +         L V D DG N R +  S+ Q L  P +SP+  K+AY +++     ++++
Sbjct: 183 NNQ-GAKFPYQLLVADYDGYNERVVLKSK-QPLMSPAWSPDGSKLAYVSFESGKA-QIFV 239

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +D    +  + + ++     +P+FS +G +  + + K  ++ +Y  DL++    ++T+  
Sbjct: 240 LDIYTGKR-EVVADYPRHNGSPQFSPDGSKLAMVLSKTGSLQVYIKDLRTKQLRQITHGR 298

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             N  A ++PD   I F SDR G+ Q+Y M     D +R++  + +    P  +P G  +
Sbjct: 299 ANNTEAVWAPDGQSIYFTSDRGGRPQVYHMDLATGDTQRVTW-QGSQNMGPQVTPDGRYL 357

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                S   + I          ++L +    ++P+ +P+G  +I+S  ++  T  +L  +
Sbjct: 358 VVVNRSDSGYNIAKQDLKTGAMQILTKARLAESPSIAPNGSMIIYSSAQNNGT-YELSLV 416

Query: 422 DLNGRNET-LINTPAYASDPQWVGFM 446
            ++GR +  L ++      P W  F+
Sbjct: 417 SIDGRFQARLPSSSKRVRAPSWGPFL 442


>gi|332851094|ref|ZP_08433203.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii 6013150]
 gi|332730258|gb|EGJ61583.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii 6013150]
          Length = 426

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 185/361 (51%), Gaps = 34/361 (9%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +V  DL RS  F   S++       N     +  DW + G   +VTG+ IK+  D   V 
Sbjct: 57  IVETDLNRSGRFTSSSKNLPANAAINQI---QASDWQAAGIPYVVTGQ-IKQTADGFEVH 112

Query: 128 FRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++L+DV+ ++Q +  +  + PAS  R+  H +SD IYQ++TG  GDF+ RI +V  +  +
Sbjct: 113 YQLYDVQ-KQQYLLNELLNVPASRIRQAGHMVSDAIYQALTGIPGDFSGRIAYVLRNPAT 171

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              + +L + D DG   + +  SRD IL  P ++P+ +K+AY +++ +    +YL D   
Sbjct: 172 PAERYTLQIADTDGEQPKTVLSSRDPIL-SPAWTPDAKKIAYVSFETKRPA-IYLQDLST 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + + +F+ +  AP FS +GK  L +   +   +IY +DL +   +R+TN   I+  
Sbjct: 230 GTR-EVLTSFKGLNGAPSFSPDGKSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSGIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A Y+PD    +F SD  G  Q+Y         KR++       F   ++ +G L A    
Sbjct: 289 ARYTPDGKAFIFTSDSGGSPQIYRYDFGNGSVKRLT-------FKGSFNARGTLSA---- 337

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNL------------QAPTWSPSGRSLIFSRKKDGDT 414
            G+K A+ V +  GS  ++ ++D N             ++P++SP+G+ ++++  ++G+ 
Sbjct: 338 DGKKIAL-VHRPSGSNYKVAIQDINTGIVNILTPTSLDESPSFSPNGQMVVYA-TREGNR 395

Query: 415 G 415
           G
Sbjct: 396 G 396


>gi|331007792|ref|ZP_08330906.1| tolB protein precursor [gamma proteobacterium IMCC1989]
 gi|330418401|gb|EGG92953.1| tolB protein precursor [gamma proteobacterium IMCC1989]
          Length = 430

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 212/420 (50%), Gaps = 23/420 (5%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           ++++    N + + +    +   + L   VS +++ DL+RS  F+ I   +     + P+
Sbjct: 24  IRISKGVDNPTVIGVVPFNYTGSNALSEDVSTIIANDLRRSGQFSPIDSSNMLSFPSLPE 83

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRL--RVEFRLWDVKDRKQIIGKKFFSSPA---- 149
           ++  ++DW  LG++ LV G +   G + L  ++ F L+DV  +K II    F+ P     
Sbjct: 84  NV-VYRDWRLLGSEYLVIGEISPNGPNGLGYQLVFSLFDVVSQKTII----FNEPIVVGA 138

Query: 150 -SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R +AH +SD +Y++ITG +G F++ I++V +   S   +  L   D DGA  + L  
Sbjct: 139 DGLRDMAHYVSDVVYEAITGIRGAFSTDIIYVEQRSNS---QYQLIRADMDGARPQILVK 195

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           S   IL  P +SP+ +KVAY +++      +++ D +  +  +++ N+  +  AP +S +
Sbjct: 196 SSQPIL-SPSWSPDGRKVAYVSFETGR-PAIFIQDLQTAQR-EQVTNYTGLNGAPAWSPD 252

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           GK+  + + KD   +IY +DL + A  R+T    I+   +++ D + I+F S+R GK Q+
Sbjct: 253 GKKLALVLSKDGNPEIYILDLATRALTRITKHFSIDTEPTWTADGAGIIFTSNRGGKPQI 312

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y+  +     +R++ + + +    + +P G  I         F I     +    ++L  
Sbjct: 313 YLASATEGYPQRLTFEGDYNARAQL-TPDGKNIVMVHRREGVFHIATQNLETGTVKVLTT 371

Query: 389 DSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQWVGFM 446
           +++L ++PT +P+G +LI++ K  G     L S+ L+ G      +T     +P W  F 
Sbjct: 372 ETSLDESPTIAPNGATLIYATKAGGK--GILASVSLDAGTRFAFPSTSGDVREPAWSPFF 429


>gi|110833619|ref|YP_692478.1| tolB protein [Alcanivorax borkumensis SK2]
 gi|110646730|emb|CAL16206.1| tolB protein [Alcanivorax borkumensis SK2]
          Length = 440

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 202/435 (46%), Gaps = 10/435 (2%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
           KI + + + L+   +  S  A + +         V IA   F         VS +V  DL
Sbjct: 14  KIWMQISVALVTSLWMISAQAELLIKVTEGRVDAVPIAVVPFDGAKNAEEDVSAIVQADL 73

Query: 74  QRSDVFN-LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
            RS  F  L  QD   +     + I  ++D+  LG + ++TG + ++      V + L+D
Sbjct: 74  HRSGQFKPLPPQDMLSRPRNEQEMI--YRDFKVLGTEYVITGSMKRQETGGYEVGYALFD 131

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V  +K+++ + +    +  R +AH ISD IY+ +TG  G F+++IL+V+ +         
Sbjct: 132 VARQKKLMSETYRPPASQLRDVAHAISDRIYEQLTGIPGAFSTKILYVTHNRHDA-NPYQ 190

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L   D DG  +  +  S + I+  P +SP+ +K+AY +++D+    +Y+ +       ++
Sbjct: 191 LQYADADGHRVTTILRSNEPIM-SPTWSPDGRKIAYVSFEDQGRPGIYIHNLATTER-EK 248

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + +F  +  AP +S +G+   +++ +D   +IY ++L +    RLTN   I+    + PD
Sbjct: 249 VSSFSGINGAPDWSPDGQHLALTLSRDGNPEIYMLNLSTKVLTRLTNNYGIDTEPRWLPD 308

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +VF S R G  Q+Y +  N    +R+S     +    V +P G  + +       + 
Sbjct: 309 GEHLVFTSSRSGGPQIYKLNINDKSVRRVSFQGGYNARSDV-TPDGRYLVYVHRRNGNYN 367

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LI 431
           +GV         ++      ++P+ +P+G  +I+  +  G     L ++ ++GR +  L 
Sbjct: 368 VGVQDLQRGTFNIVTRTDMDESPSVAPNGSMVIYGTQHGG--AGVLEAVSIDGRVKVELP 425

Query: 432 NTPAYASDPQWVGFM 446
           +      +P W  F+
Sbjct: 426 SKEGEVREPAWSPFL 440


>gi|157374996|ref|YP_001473596.1| TolB domain-containing protein [Shewanella sediminis HAW-EB3]
 gi|189035990|sp|A8FUE5|TOLB_SHESH RecName: Full=Protein tolB; Flags: Precursor
 gi|157317370|gb|ABV36468.1| TolB, N-terminal domain protein [Shewanella sediminis HAW-EB3]
          Length = 442

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 203/405 (50%), Gaps = 37/405 (9%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ--DWNSLGAQVLVTGRVIKEGK 121
           ++S+VV  DL RS  F  + + S  Q+  N  +I +FQ  DW ++GA+ +V G +   G+
Sbjct: 53  QISDVVMSDLTRSGTFKTLDELSLPQR--NISAISQFQAKDWANVGAEAVVMGAIKPYGE 110

Query: 122 DRLRVEFRLWD-VKDRKQ------------IIGKKFFSSPASWRKIAHTISDDIYQSITG 168
           D+  V F L D VK + Q            I  ++   S A +R+  H ISD IY+ +TG
Sbjct: 111 DKYLVSFDLVDLVKAQMQSGTGPQSKQEFLIDSRETVISSAQFRQYGHRISDIIYEKLTG 170

Query: 169 EKGDFNSRILFVSESVVSGIIKNS------LCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            +G F +RI +V       ++K+       L + D DG N + L  S +  L  P +SP+
Sbjct: 171 IRGAFLTRIAYV-------VVKHGEKSPYQLMISDYDGHNEQMLLRSPEP-LMSPSWSPD 222

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +++AY +++++    +++ D    ++  +I +F  +  AP FS +GK+  +++ KD   
Sbjct: 223 GRQLAYVSFENKKA-EIFIQDI-YTQSRSKITSFAGINGAPVFSPDGKKLALTLSKDGQP 280

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +IY VD+ + A +R+TN   I+  AS+ PD   ++F S+R G+ Q+Y +       +R++
Sbjct: 281 EIYVVDISTKALKRVTNHYAIDTEASWFPDGKSLIFTSERGGRPQIYKVTLASGKVQRMT 340

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            + E +    +  P G  + F   +  K+ I  M  +    ++L      ++P+ +P+G 
Sbjct: 341 FEGEWNLGGSIL-PDGRSMIFVNRTNGKYNIARMDLETRFMQVLTSTRLDESPSVAPNGT 399

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVGFM 446
            +I+     G     L ++  +GR +  + T       P W  F+
Sbjct: 400 MVIYGTTYQGK--QVLAAVSTDGRFKARLPTGQGEVKSPSWSPFL 442


>gi|119371033|sp|Q0VRJ2|TOLB_ALCBS RecName: Full=Protein tolB; Flags: Precursor
          Length = 434

 Score =  140 bits (353), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 202/435 (46%), Gaps = 10/435 (2%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
           KI + + + L+   +  S  A + +         V IA   F         VS +V  DL
Sbjct: 8   KIWMQISVALVTSLWMISAQAELLIKVTEGRVDAVPIAVVPFDGAKNAEEDVSAIVQADL 67

Query: 74  QRSDVFN-LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
            RS  F  L  QD   +     + I  ++D+  LG + ++TG + ++      V + L+D
Sbjct: 68  HRSGQFKPLPPQDMLSRPRNEQEMI--YRDFKVLGTEYVITGSMKRQETGGYEVGYALFD 125

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V  +K+++ + +    +  R +AH ISD IY+ +TG  G F+++IL+V+ +         
Sbjct: 126 VARQKKLMSETYRPPASQLRDVAHAISDRIYEQLTGIPGAFSTKILYVTHNRHDA-NPYQ 184

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L   D DG  +  +  S + I+  P +SP+ +K+AY +++D+    +Y+ +       ++
Sbjct: 185 LQYADADGHRVTTILRSNEPIM-SPTWSPDGRKIAYVSFEDQGRPGIYIHNLATTER-EK 242

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + +F  +  AP +S +G+   +++ +D   +IY ++L +    RLTN   I+    + PD
Sbjct: 243 VSSFSGINGAPDWSPDGQHLALTLSRDGNPEIYMLNLSTKVLTRLTNNYGIDTEPRWLPD 302

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +VF S R G  Q+Y +  N    +R+S     +    V +P G  + +       + 
Sbjct: 303 GEHLVFTSSRSGGPQIYKLNINDKSVRRVSFQGGYNARSDV-TPDGRYLVYVHRRNGNYN 361

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LI 431
           +GV         ++      ++P+ +P+G  +I+  +  G     L ++ ++GR +  L 
Sbjct: 362 VGVQDLQRGTFNIVTRTDMDESPSVAPNGSMVIYGTQHGG--AGVLEAVSIDGRVKVELP 419

Query: 432 NTPAYASDPQWVGFM 446
           +      +P W  F+
Sbjct: 420 SKEGEVREPAWSPFL 434


>gi|187927780|ref|YP_001898267.1| translocation protein TolB [Ralstonia pickettii 12J]
 gi|187724670|gb|ACD25835.1| Tol-Pal system beta propeller repeat protein TolB [Ralstonia
           pickettii 12J]
          Length = 434

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 191/417 (45%), Gaps = 16/417 (3%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
           HA + V  +    S   IA   F    +    +S +V  DL RS  F+ +        + 
Sbjct: 30  HAQLNVEISGVGASQYPIAIANFQGEAQAPQNLSAIVRADLVRSGRFSNVD---VAGAVV 86

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
                P    W + GA   V G V + G DR  + FRL+D    + + G      P   R
Sbjct: 87  PESPAPDLGAWKAKGAAAFVGGTVTRNG-DRYEIRFRLYDTAKGESLGGLSLTRGPGQLR 145

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
             AH I+D IYQ + GE+G F +R+ +VS+       +  L + D DGAN +    S + 
Sbjct: 146 LAAHEIADYIYQKLIGERGVFATRLSYVSKVGR----RFQLQISDSDGANPQIALTSNEP 201

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           I+  P +SP+  KVAY +++ +  + VY+ D    R    I N +    AP +S +G+  
Sbjct: 202 II-SPAWSPDGTKVAYVSFESKKPV-VYVHDLVAGRR-TVISNQKGNNSAPAWSPDGRHV 258

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +S+ +D    +Y V+   +   RL+ +  I+   S+SPD   I F SDR G  Q+Y M 
Sbjct: 259 AVSLSRDGNTQVYLVNADGSGLRRLSRSSAIDTEPSFSPDGRSIYFTSDRGGAPQIYRMS 318

Query: 333 SNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +G +     +      ++  P  SP G L+A+    G  F +            L + S
Sbjct: 319 VDGEEAGGAQRVTFKGNYNTSPRVSPDGKLLAYISRVGGAFRLYTQDLSNGDVNALTDTS 378

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVGFM 446
           N ++P+++ +G+ ++++ +  G   S L ++  +GR   +++  A    +P W  FM
Sbjct: 379 NDESPSFAANGKFILYATRVGGK--SVLAAVSTDGRTRQVLSLQAGEVREPAWGPFM 433


>gi|291612990|ref|YP_003523147.1| Tol-Pal system beta propeller repeat protein TolB [Sideroxydans
           lithotrophicus ES-1]
 gi|291583102|gb|ADE10760.1| Tol-Pal system beta propeller repeat protein TolB [Sideroxydans
           lithotrophicus ES-1]
          Length = 419

 Score =  140 bits (352), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 194/419 (46%), Gaps = 17/419 (4%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK-VSEVVSKDLQRSDVFNLISQDSFK 88
            S  A + +    A    V I+   F   +  GG+ +S VVS DL R+ +F L+  D   
Sbjct: 14  CSARAELSIEITGAGEHQVPISLVPFAGDENQGGQSISTVVSNDLLRTGLFKLV--DPAG 71

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
           +    P  +  + +W   G   L+ G+V      RL V FRL D+  R ++IG    +  
Sbjct: 72  KAPHEPGEV-NYVEWP--GVDALLIGKVRNLDGGRLEVRFRLLDMVRRTELIGLAVTAKS 128

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R IAH +SD IY+ +TG+ G F++RI +V+        K  L V D DG   + L  
Sbjct: 129 EQLRAIAHRVSDLIYEKLTGDPGVFSTRIAYVNRDGK----KYRLVVADSDGYGEQTLLA 184

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             + I+  P +SP+  ++AY +++         + +   R    + +F     AP +S +
Sbjct: 185 LNEPIM-SPAWSPDGSQLAYVSFERGHA--SVFVQSLATRKRTVLADFPGSNSAPAWSPD 241

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           GK+  + + +D    +Y V        R+T +  I+    ++PD   ++F SDR G  Q+
Sbjct: 242 GKQLALVLSRDGYSQLYLVRNDGKDLHRITFSETIDTEPVFTPDGKSLLFTSDRGGSAQI 301

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y +   G   +R++ D   + F P  SP G    F+ F    F I V   + +Q ++L  
Sbjct: 302 YRVPVEGGSAERLTFDG-TNNFSPRPSPDGKSFVFSHFVDGVFYIAVQDFETNQMQVLTG 360

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
               + P+++P+G+ ++F+ +  G     L ++  +GR  + +I       +P W  F+
Sbjct: 361 GGWEKKPSFAPNGKLILFATESQGR--GILATVSSDGRVKQKMIAQRGDIREPIWGPFL 417


>gi|262373122|ref|ZP_06066401.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           junii SH205]
 gi|262313147|gb|EEY94232.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           junii SH205]
          Length = 427

 Score =  139 bits (351), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 184/365 (50%), Gaps = 35/365 (9%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ--DWNSLGAQVLVTGRVIKEGKD 122
           +  +V  DL RS  F   S++     +    S+ + Q  DW + G   +V G++     +
Sbjct: 54  IYPIVENDLNRSGRFTSASRN-----LPASASLNQIQASDWQNAGVPYVVVGQIKSINAN 108

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
              V ++L+DV+ ++ ++ +      +  R+  H ISD IYQ++TG  GDF+ RI +V  
Sbjct: 109 SFEVHYQLYDVQKQQYLLNEVLTVPNSRIRQAGHMISDAIYQALTGIAGDFSGRIAYVLR 168

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +  +   + +L + D DG   + +  SRD IL  P +SP+ +K+AY +++ +    +YL 
Sbjct: 169 NQATPAQRYTLQIADTDGEQPKTVLSSRDPIL-SPTWSPDAKKIAYVSFETKRPA-IYLQ 226

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    +  + + +FR +  AP FS +G+  L +       +IY ++L +   +R+TN   
Sbjct: 227 DLATGQR-EVLASFRGLNGAPSFSPDGQSMLFTASMHGNPEIYQMNLNTRQVKRMTNDSA 285

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I+  A Y+PD    +F SDR G  Q+Y         KR++       F   ++ +G L A
Sbjct: 286 IDTEARYAPDGKSFIFTSDRGGSPQIYRYSFEDGSVKRLT-------FKGAFNARGTLSA 338

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNL------------QAPTWSPSGRSLIFSRKK 410
                G+K A+ V +  GS  ++ ++D N             ++P++SP+G+ ++++  +
Sbjct: 339 ----DGKKIAL-VHRPSGSSYKVALQDINTGITNILTPTSLDESPSFSPNGQMVVYA-TR 392

Query: 411 DGDTG 415
           +G+ G
Sbjct: 393 EGNRG 397


>gi|42521812|ref|NP_967192.1| adventurous gliding motility protein W [Bdellovibrio bacteriovorus
           HD100]
 gi|67461965|sp|Q6MRB2|TOLB_BDEBA RecName: Full=Protein tolB; Flags: Precursor
 gi|39574342|emb|CAE77846.1| Adventurous gliding motility protein W [Bdellovibrio bacteriovorus
           HD100]
          Length = 461

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 223/474 (47%), Gaps = 61/474 (12%)

Query: 18  CLLLVLIGGFFPTSIHA------FVKVATNSANYSPVSIAFTKFVSIDE-------LGGK 64
            L L LI G FP   HA      ++K+       S ++    ++            +G +
Sbjct: 5   ILALALIIGLFPLFSHAQNNNGIYIKLGEARTKKSLMAFPPLQYTGSPSTASRNQGVGVE 64

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP--------RFQDWNSLGAQVLVTGRV 116
           +   ++ DL  S  F  I+Q +F +  +    +P        +FQ W+S+GA  L+    
Sbjct: 65  IFNTITNDLTVSSYFQFINQSAFLEDTSKTGLMPAPGLPNGFKFQSWSSIGADFLIRAGY 124

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
              G + + +E   + V     ++GKK+    +S R+IAHT ++D+ +++TG +G F SR
Sbjct: 125 SVVGNE-VTLETYTYHVPRAALVLGKKYKGPTSSARRIAHTFANDVMKALTGVEGPFLSR 183

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY----- 231
           ++ VS    SG  K  +  MD DGAN+  ++  R  I   P +SP+ +K+AY +Y     
Sbjct: 184 VV-VSSDKGSGQSK-EIFTMDWDGANMEQVSNHR-SISISPAWSPDGKKIAYTSYVKRVG 240

Query: 232 ---DDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQKDEAMDIYSV 287
               + D+L   L+D  +    + + ++R  I     FS++GK   +++ +  + DIY +
Sbjct: 241 AKFRNADML---LLD--LTTGKRSLISYRQGINSGASFSADGKHIYLTISQGNSPDIYKM 295

Query: 288 DLQSNATERLTN--TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            L      ++TN     +N+  + SP    + F SDR G+  +Y   + G++ KRI+   
Sbjct: 296 GLDGTLVGKITNGPAGALNVEPTVSPQ-GLLSFSSDRAGRPMIYTADAAGNNVKRIT--- 351

Query: 346 EASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-------SNLQAPT 396
            A  F+  P WSP G  IAF   S   F I VM  DG+    L          ++ + P+
Sbjct: 352 FAGVFNSSPSWSPDGKKIAFAGQSDNNFDIFVMNADGTGMIRLTSAKKPNGRMASNEDPS 411

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI---NTPAYASDPQWVGFMD 447
           +SP GR ++++  + G   +++Y   ++G  E  +   N   Y   P+W   +D
Sbjct: 412 FSPDGRFVMYTSNRTGK--NQIYISTVDGTEERRVTNDNNNYY--KPKWSNNID 461


>gi|255319441|ref|ZP_05360656.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           radioresistens SK82]
 gi|262379404|ref|ZP_06072560.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           radioresistens SH164]
 gi|255303509|gb|EET82711.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           radioresistens SK82]
 gi|262298861|gb|EEY86774.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           radioresistens SH164]
          Length = 427

 Score =  139 bits (350), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 206/422 (48%), Gaps = 42/422 (9%)

Query: 11  LNMKINLCLLLVLIGGFFP---TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
           +NM     L L L   F P   T+  A + +    A      IA   F + D+    +  
Sbjct: 1   MNMTRKTLLALALTAVFSPAITTTAFAQLHLEIAKAPEEAPKIAIAPFAN-DQ---SIYP 56

Query: 68  VVSKDLQRSDVFNLISQD-SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           +V  DL RS  F   S++      + N ++    Q W +     +VTG +     D   V
Sbjct: 57  IVESDLNRSGRFTSSSKNLPASAALNNINA----QSWQAAKIPYVVTGSIKSVAGDSYEV 112

Query: 127 EFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
            ++L+DV+ +  ++  +  + PAS  R+  H ISD IYQ++TG  GDF+ RI +V  +  
Sbjct: 113 HYQLYDVEKQTYLL-NELLTVPASRIRQAGHMISDAIYQALTGIPGDFSGRIAYVLRNPA 171

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   + +L + D DG   R +  SRD IL  P ++P+ +K+AY +++ +    +Y+ D  
Sbjct: 172 TPEQRYTLQIADTDGEQPRTVLSSRDPIL-SPAWTPDAKKLAYVSFETKRPA-IYVQDLA 229

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  + + +FR +  AP FS +G+  L +       ++Y +DL +   +R+TN   I+ 
Sbjct: 230 TGQR-EVLASFRGLNGAPSFSPDGQSMLFTASMHGNPEVYQMDLTTRQLKRMTNNSAIDT 288

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A Y+PD    +F SDR G  Q+Y         KR++       F   ++ +G L A   
Sbjct: 289 EARYAPDGKSFIFTSDRGGSAQIYRYSFADGSVKRLT-------FKGAFNARGTLSA--- 338

Query: 366 FSGEKFAIGVMKKDGSQERLLVED-----SNL-------QAPTWSPSGRSLIFSRKKDGD 413
             G+K A+ V +  GS  ++ ++D     +N+       ++P++SP+G+ ++++  ++G+
Sbjct: 339 -DGKKVAL-VHRPAGSNYKVAIQDIATGITNILTPTSLDESPSFSPNGQMVVYA-TREGN 395

Query: 414 TG 415
            G
Sbjct: 396 RG 397


>gi|255020046|ref|ZP_05292119.1| tolB protein precursor, periplasmic protein involved in the
           tonb-independent uptake of group A colicins
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970575|gb|EET28064.1| tolB protein precursor, periplasmic protein involved in the
           tonb-independent uptake of group A colicins
           [Acidithiobacillus caldus ATCC 51756]
          Length = 436

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 179/381 (46%), Gaps = 17/381 (4%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKD 122
           ++++V +DL+ S  F++I+ D +     +P ++       W   GA  LV G V   G+D
Sbjct: 67  IAQIVRQDLRYSGYFHVIAPDLYP---ADPHAVRGLSSTAWTKTGALTLVLGSVQSAGQD 123

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
             RV+  + ++ D K I  ++F  + AS+ ++   +++ +Y+++TG  G F   I FV  
Sbjct: 124 -YRVQAYVVNLLDDKVIAARRFSGAAASYHQMGQDVANLVYRAVTGHPGPFRGHIAFVDA 182

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G  +  L V   DG + R +   R  ++  P +SP    +AY +Y  +  + +Y+ 
Sbjct: 183 R--GGQFR--LQVAASDGWHPRTVLRGRIPVI-SPAWSPGHGHLAYVSYRHQHSV-IYIQ 236

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           + R  +  + +    +   AP +S  G   A   V      +I  ++L       LT   
Sbjct: 237 NLRNGQR-REVPGHGAAQSAPAYSPGGHYLAFARVWGHGRTEIVRLNLADGQERVLTREG 295

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +N S  ++P    I+F S+R+G  Q++ M  NG   +R+S +   +   P  SP G  I
Sbjct: 296 TVNTSPVWTPSGRHILFVSNRDGSAQIFQMNRNGGGVRRLSFNGGYN-VSPAISPNGRWI 354

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            F        ++ VM + G   R+L   +N + P+++P GR L+F+  + G     L  +
Sbjct: 355 GFIHADAGILSLAVMDRQGGDLRVLYAGANCERPSFAPDGRMLLFNTHQGGR--KVLAEV 412

Query: 422 DLNGRNETLINTPAYASDPQW 442
            +NG+    +  P  A++  W
Sbjct: 413 AINGKGLHFLQLPGQANEGSW 433


>gi|163751257|ref|ZP_02158485.1| tolB protein [Shewanella benthica KT99]
 gi|161328971|gb|EDQ00045.1| tolB protein [Shewanella benthica KT99]
          Length = 442

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 201/405 (49%), Gaps = 37/405 (9%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF--QDWNSLGAQVLVTGRVIKEGK 121
           ++S+VV  DL RS  F  + +    Q+  N  S+ +F  +DW+S+GA+ +V G +   G 
Sbjct: 53  QISDVVMSDLIRSGAFKPLDELGLPQR--NISSVSQFVAKDWSSIGAEAVVMGSIKPYGN 110

Query: 122 DRLRVEFRLWD-VKDRKQ------------IIGKKFFSSPASWRKIAHTISDDIYQSITG 168
           D+  V F L D VK + Q            I  ++   S A +R+  H ISD +Y+ +TG
Sbjct: 111 DQYLVTFDLVDLVKAQMQQGAGPQSNSEYLIDSRETVISAAQFRQYGHRISDLVYEELTG 170

Query: 169 EKGDFNSRILFVSESVVSGIIKNS------LCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            +G F +R+ +V       ++K+       L + D DG N + L  S +  L  P +SP+
Sbjct: 171 IRGAFLTRLAYV-------VVKHGEKSPYQLMISDYDGYNEQMLLRSSEP-LMSPSWSPD 222

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +K+AY +++++    +++ D    ++  ++ +F  +  AP FS +GK+  +++ KD   
Sbjct: 223 GRKLAYVSFENKKA-EIFIQDI-YTQSRNKVSSFNGINGAPVFSPDGKKLALTLSKDGQP 280

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +IY +D+ + A +R+TN   I+  AS+ PD   ++F S+R G+ Q+Y +       +R++
Sbjct: 281 EIYVIDIATKALKRVTNHYAIDTEASWFPDGKSLIFTSERGGRPQIYKVTLASGKVQRLT 340

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            + E +    + +P G  + F   +  KF I  M  +    ++L      ++P+ +P+G 
Sbjct: 341 FEGEWNLGGSI-APDGRSMIFVNRTNGKFNIARMDLETRFMQILTSTRLDESPSVAPNGT 399

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
            +I+     G     L ++  +GR    L         P W  F+
Sbjct: 400 MVIYGTTHQGK--QVLGAVSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|332993883|gb|AEF03938.1| translocation protein TolB [Alteromonas sp. SN2]
          Length = 451

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 204/461 (44%), Gaps = 49/461 (10%)

Query: 19  LLLVLIGGFFPTSIHAFVKV----ATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           L +  I   F   + A +++      NSA   P+ +   K+     L   +SEV+  DL 
Sbjct: 6   LWIAAIAMVFSAKVFATLEIVITEGINSAR--PIGVVPFKWKGTGTLPSDISEVIMADLM 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV- 133
           RS  F+ ++     Q     D +  +  W SLG   ++ G +  EG D+  V ++L DV 
Sbjct: 64  RSGKFSPVATSKMPQMPETADEV-NYSAWASLGVDTVLVGSIEPEGTDKYLVSYQLVDVL 122

Query: 134 -------------------KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
                               +   I  ++   SP  +R+ AH ISD +Y+ +TG +G F 
Sbjct: 123 KGQLDGGQSQVLKNGELVVSNEHVIAARQSIISPRDFRQYAHRISDVVYEKLTGVRGAFL 182

Query: 175 SRILFVSESVVSGIIKN--------SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           +RI +V       I+++         L + D DG N   L  S  + L  P +SP+ +K+
Sbjct: 183 TRIAYV-------IVRDRDAYEKPYQLVISDYDGENETRLL-SSPEPLMSPVWSPDGEKL 234

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           AY ++++    ++++ D    +    + +F  +  +P FS +GK+  + + KD   +IY 
Sbjct: 235 AYVSFENRRP-QIFIQDIYTSKR-TTVTDFPGINGSPSFSPDGKQLAMVLSKDGNPEIYV 292

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +DL +    R+T    I+   S+ PD S ++F S+R GK Q+Y +  N    +R++   E
Sbjct: 293 MDLATKNLTRVTRNRAIDTEPSWLPDGSGLIFSSERGGKPQIYSVNLNSRKVRRVTFVGE 352

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +      +P G  +     +   + I     DG   ++L      ++P+ +P+G  +I+
Sbjct: 353 QN-LGATLTPDGKQMVVVNQTNGNYHIAKQALDGGSPQVLTRTFLDESPSVAPNGSMIIY 411

Query: 407 SRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           S   +G     L S+D  GR    L         P W  F+
Sbjct: 412 STLHEGTQVLSLVSLD--GRFKARLPAADGQVKSPSWSPFL 450


>gi|221134414|ref|ZP_03560719.1| Periplasmic component of the Tol biopolymer transport system
           [Glaciecola sp. HTCC2999]
          Length = 455

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 210/445 (47%), Gaps = 45/445 (10%)

Query: 33  HAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
           HA + +       N +P+++    +     L G++S+V++ DL+RS  FN ++     Q 
Sbjct: 24  HAQLNIVITEGVDNATPIAVVPFGWEGEGILPGELSDVINHDLRRSGRFNPMNMSQMPQF 83

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ------------ 138
             +  S+  +Q W   G   +V G+V + G DR +++F+L D +   Q            
Sbjct: 84  PRDISSV-NYQSWVDKGINTIVVGKVKELGGDRFQIDFQLIDTQAGSQLEKSGQMLLDGQ 142

Query: 139 --------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS----ESVVS 186
                   I G+    +   +R+  H ISD +Y+ +TG++G F +RI +V+    E+V  
Sbjct: 143 LVAGQSQLIAGRTLTVTGRDFRQFGHRISDIVYEKLTGQRGAFLTRIAYVAVRDRETVAR 202

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED----ILRVYLM 242
                 L + D DG N   L  S++  L  P +SP+  K+AY ++++      I  +Y M
Sbjct: 203 ---PYQLVIADYDGENELALLSSKEP-LMSPSWSPDGNKLAYVSFENGKPQIFIQDIYTM 258

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            +R+     ++ +F  +  APRFS +GK+  + + KD   DIY +++ +    R+T    
Sbjct: 259 -SRV-----KLTDFPGINGAPRFSPDGKKIAMVLSKDGNPDIYVMEIATRQLTRVTRHRA 312

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I+   S++P+  ++VF S+R GK Q+Y +    +  KR++ + + +    +     +L+ 
Sbjct: 313 IDTEPSWAPNGKELVFSSERGGKPQIYRVNLETNRIKRLTFEGDMNLGGTITPDGTELVV 372

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             + +G          DG+ + L     + ++P+ +P+G  +I+S   +G     L S+D
Sbjct: 373 VNRTNGNYHIARQNLNDGAMQVLTTTFLD-ESPSIAPNGSMIIYSTLHEGTQVLSLVSLD 431

Query: 423 LNGR-NETLINTPAYASDPQWVGFM 446
             GR    L         P W  F+
Sbjct: 432 --GRFKARLPGVAGQIKAPSWSPFL 454


>gi|127512456|ref|YP_001093653.1| TolB domain-containing protein [Shewanella loihica PV-4]
 gi|166988083|sp|A3QD46|TOLB_SHELP RecName: Full=Protein tolB; Flags: Precursor
 gi|126637751|gb|ABO23394.1| TolB, N-terminal domain protein [Shewanella loihica PV-4]
          Length = 441

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 204/427 (47%), Gaps = 25/427 (5%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVSKDL 73
           NL   L+L   F      A + +       +   IA   FV      +  ++S+VV  DL
Sbjct: 3   NLGRWLILGLAFLTIPAKAALDIVITEGVDAARPIAVVPFVWQGSTPMPQQISDVVMSDL 62

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD- 132
            RS  F  + +    Q+     +    + W+++ A+ +V G V   G D+  V F L D 
Sbjct: 63  TRSGTFKPMDELGLPQRNLGSLAQMDLKAWSNVAAEAVVMGTVKPYGPDQYLVNFELIDL 122

Query: 133 VKDRKQIIGKKFFS-----------SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
           VK + Q  G +  S           S A +R+  H ISD +Y+ +TG +G F +RI +V 
Sbjct: 123 VKAQMQSGGPQSASEYLLDSRETVISSAQFRQYGHRISDIVYEKLTGIRGAFLTRIAYV- 181

Query: 182 ESVVSGIIKNS--LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
             VV    K+   L + D DG N + L  S +  L  P +SP+ +++AY +++++    V
Sbjct: 182 --VVDHKAKSPYKLMIADYDGYNEQMLLRSPEP-LMSPAWSPDGRRLAYVSFENKQA-EV 237

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           ++ D    +  K + +F  +  AP FS +GK+  +++ KD   +IY  D+ + A +R+TN
Sbjct: 238 FVQDIYTQQRTK-VTSFPGINGAPTFSPDGKKLALTLSKDGQPEIYVADIATKAIKRVTN 296

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              I+  AS++PD   ++F S+R G+ Q+Y +        R++ + E +    + SP G 
Sbjct: 297 HYAIDTEASWTPDGKSLIFTSERGGRPQIYQVALASGKVTRLTFEGEWNLGGSI-SPDGR 355

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            + F   +  KF I  M  +    ++L      ++P+ +P+G  +I+     G     L 
Sbjct: 356 SMVFVNRTNGKFNIARMDLETRFMQVLTTTRLDESPSIAPNGTMVIYGTTYQGQ--QVLA 413

Query: 420 SIDLNGR 426
           ++ ++GR
Sbjct: 414 AVSMDGR 420


>gi|206602338|gb|EDZ38819.1| Putative TolB protein [Leptospirillum sp. Group II '5-way CG']
          Length = 447

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 218/454 (48%), Gaps = 46/454 (10%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAF-VKVATN-SANYSPVSIAFTKFVSIDELGGKVSEV-- 68
           + I+LC +L+  G FFP    A  + V TN +A +  +S     +VS+       SEV  
Sbjct: 15  LGISLCAILIGGGLFFPARARAVNLNVITNQTALFFKLS-----YVSLGARNLSPSEVRY 69

Query: 69  ----VSKDLQRSDVFNLIS-----QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
               + +DL+ +  F ++      Q S    +   DS+ +     S G + +   ++IK+
Sbjct: 70  ANALIVRDLEETGYFEIVPLSSGDQRSLGNMVLTGDSVRKLA---SSGLEGVAGAQLIKD 126

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                 V   + D  +   ++ +K+ ++  + R I H   DDI    TG KG  ++RI F
Sbjct: 127 DLGTHLVGI-VRDPVNGTVLLSRKY-TTTGNIRVIIHRFVDDIVFQFTGFKGVADARIAF 184

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--DDEDIL 237
           + ++   G     L VMD DG  I  LT  R  + + P +S ++  + Y +Y   +  IL
Sbjct: 185 IGKNRRRGY---DLYVMDFDGEGIHRLTWDR-VLAYTPAWSLSRHLIVYTSYLHSEPQIL 240

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR---ALISVQKDEAMDIYSVDLQSNAT 294
              L   R  R+P  +  F  + + P FS N      AL   Q  +  +IYS D++ +  
Sbjct: 241 SYDLSTGR--RSP--LARFPGLNITPNFSRNSAMLAMALSKSQTSQNTEIYSYDMKYHRF 296

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--P 352
           ERLT +   N+S S+SPD SQIVF SDR+G  Q++VM S+GS++ RIS      +++  P
Sbjct: 297 ERLTYSHSNNLSPSWSPDGSQIVFVSDRDGHPQIFVMDSDGSNEHRIS---FTGFYNVSP 353

Query: 353 VWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKK 410
            WSP+GD IA+   +   +  I +    G +   L   S    +P WSP GR+++F+ + 
Sbjct: 354 SWSPRGDAIAYVCMNERHRPKICLTTPTGDRSLQLTHGSGQDDSPDWSPDGRTILFTHQV 413

Query: 411 DGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWV 443
            G   S +  + L+G +   L + P     P W 
Sbjct: 414 KGH--SYIEKMFLDGTHVHRLGSYPHSVITPVWA 445


>gi|218516344|ref|ZP_03513184.1| translocation protein TolB [Rhizobium etli 8C-3]
          Length = 133

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 63/134 (47%), Positives = 92/134 (68%), Gaps = 1/134 (0%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
            V +     N  P+ IA T F+  D +G +VS+V++ DLQRS +F  I++ +F +KI+NP
Sbjct: 1   MVTLDLRKGNVQPMPIAVTDFLQGD-MGAQVSQVIAADLQRSGLFAPINKSAFIEKISNP 59

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
           D+ PRF+DW  + AQ LVTGRV +E   RLR EFRLWD    +Q+ G++F++ P +WR++
Sbjct: 60  DASPRFEDWKVINAQALVTGRVTQEADGRLRAEFRLWDPFAGQQMTGQQFYTQPENWRRV 119

Query: 155 AHTISDDIYQSITG 168
           AH I+D IY+ ITG
Sbjct: 120 AHIIADAIYKQITG 133


>gi|186477204|ref|YP_001858674.1| translocation protein TolB [Burkholderia phymatum STM815]
 gi|226705871|sp|B2JGA0|TOLB_BURP8 RecName: Full=Protein tolB; Flags: Precursor
 gi|184193663|gb|ACC71628.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           phymatum STM815]
          Length = 430

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 207/440 (47%), Gaps = 19/440 (4%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           +L ++  +   L+  GG    + HA + V       +   IA   F +      ++S +V
Sbjct: 6   KLGLRALVASCLIAAGG----AAHAQLNVLVTGVGSTQFPIATANFANEANSPQQISTIV 61

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
            +DLQRS  F  I  D+    ++  DS+     W + GA   V G V K    + +V F+
Sbjct: 62  RQDLQRSGKFTNI--DAGSAPVSEGDSV-DLGAWKAKGANAFVAGSVTKLPNGQYQVRFK 118

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D  +++ + G +  S     R  AH ++D IY  + G +G F +R+ +V ++      
Sbjct: 119 LYDTVNQQSLGGLELVSPEGGLRMSAHKVADYIYAKLMGGRGVFATRLSYVIKTGN---- 174

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D DG +  ++  S  + +  P +SP+  KVAY +++ +  + VY+ D    R 
Sbjct: 175 RYQLQISDSDGQDA-HIALSSPEPIISPAWSPDGTKVAYVSFEKKKPI-VYIHDLPTGRR 232

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              + + +    AP +S +G+   +++ +     I++V+   +   RLT    I+   SY
Sbjct: 233 -VVVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTEPSY 291

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS 367
           SPD   I F SDR G+ Q+Y M ++G       +      ++  P  SP G  +A+   +
Sbjct: 292 SPDGQSIYFTSDRGGQPQIYKMPASGEASGGAQRVTFTGNYNTSPRVSPDGKQLAYISRT 351

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G  F + +          L + ++ ++P+++ +G+ ++++ + +G     L ++  +GR 
Sbjct: 352 GGGFKLYIQDLQSGVATALTDTTHDESPSFAANGQYILYATQVNGR--GVLAAVSTDGRT 409

Query: 428 ETLINTPAYA-SDPQWVGFM 446
             +++    +  +P W  FM
Sbjct: 410 RQVLSVQGGSVREPSWGPFM 429


>gi|124385902|ref|YP_001028613.1| translocation protein TolB [Burkholderia mallei NCTC 10229]
 gi|254207691|ref|ZP_04914041.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei JHU]
 gi|147751585|gb|EDK58652.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei JHU]
          Length = 431

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 195/441 (44%), Gaps = 18/441 (4%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+ VV
Sbjct: 4   KLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVTSVV 59

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
             DL RS  F+ +  D+    +    S+  F  W + GA   V G V +E   + +V F 
Sbjct: 60  RGDLARSGKFSNV--DAGSTPVPETASV-DFGAWKAKGANAFVAGSVNREPNGQYKVNFI 116

Query: 130 LWDVKDRKQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           L+D   ++ + G    +S      RK  H I+D IYQ + G +G FN+R+ +V  +    
Sbjct: 117 LYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRT--GN 174

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
           + K  L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D    
Sbjct: 175 VYK--LLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDLPTG 230

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R    I N +    AP +S +G+   +++       IYSV        RLT +  I+   
Sbjct: 231 RR-YVISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSIDTEP 289

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTK 365
            YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+  
Sbjct: 290 FYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYIS 349

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +G  F + V          +   +  ++P+++ +G+ ++++R+  G +       D + 
Sbjct: 350 RTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYARQSGGRSVLAAVPSDGSA 409

Query: 426 RNETLINTPAYASDPQWVGFM 446
             + L        +P W  FM
Sbjct: 410 PPQILSVQGGAIREPSWGPFM 430


>gi|71278150|ref|YP_268469.1| translocation protein TolB [Colwellia psychrerythraea 34H]
 gi|119371042|sp|Q484P6|TOLB_COLP3 RecName: Full=Protein tolB; Flags: Precursor
 gi|71143890|gb|AAZ24363.1| tolB protein [Colwellia psychrerythraea 34H]
          Length = 449

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 194/399 (48%), Gaps = 32/399 (8%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P++I    +    E    +S+V+S DL RS  F+ I+ D F Q I++  +I  +  W +L
Sbjct: 37  PIAIIPFNWTGTGERPELLSKVISDDLLRSGKFSPIAIDRFPQTISDAKAI-DYSAWANL 95

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK----------------FFSSPAS 150
           GA+ ++ G + +    R +V ++L DV  R QI G +                   S A+
Sbjct: 96  GAEAVLLGNINEVAPGRYQVSYQLVDVI-RGQITGGETSMLSNGELVNPKDHILAQSSAN 154

Query: 151 -----WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANI 203
                 R+ AH+IS+ IY+ +TG KG F S+I +V   +V   G     L   D DG N 
Sbjct: 155 IQLNQARRYAHSISNVIYEKLTGSKGAFLSKIAYV---IVRDQGKYPYQLAFADYDGFNE 211

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             L  S++  L  P + PN  ++AY ++++    +++ +D       K I +F  +  AP
Sbjct: 212 HVLLSSKEP-LMSPSWHPNGDQLAYVSFENRQA-QIHSIDIYTG-VRKSISSFNGINSAP 268

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           RFS +GK   + + KD   D+Y ++L +    R+T    I+   S++PD + ++F S+R 
Sbjct: 269 RFSPDGKSMAMVLSKDGNPDLYVMELATMKLRRITRNRAIDTEPSWTPDGNSLIFSSERG 328

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           GK QLY +   G   +R++ D E +    V +P G  +     +  K+ +   +      
Sbjct: 329 GKPQLYRVDLAGGKVRRLTFDGEVNLGGSV-TPDGKQLIMVNRTRGKYRLAKQELSSGLF 387

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           ++L E    ++P+ SP+G  +I+S   +      L S+D
Sbjct: 388 QVLTETRLDESPSVSPNGGMIIYSTLHNNRQVLGLVSVD 426


>gi|238561025|ref|ZP_00442669.2| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei GB8 horse 4]
 gi|254175452|ref|ZP_04882112.1| tolB protein [Burkholderia mallei ATCC 10399]
 gi|254202357|ref|ZP_04908720.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei FMH]
 gi|254356407|ref|ZP_04972683.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei 2002721280]
 gi|147746604|gb|EDK53681.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei FMH]
 gi|148025404|gb|EDK83558.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei 2002721280]
 gi|160696496|gb|EDP86466.1| tolB protein [Burkholderia mallei ATCC 10399]
 gi|238525395|gb|EEP88823.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei GB8 horse 4]
          Length = 430

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 195/441 (44%), Gaps = 18/441 (4%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+ VV
Sbjct: 3   KLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVTSVV 58

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
             DL RS  F+ +  D+    +    S+  F  W + GA   V G V +E   + +V F 
Sbjct: 59  RGDLARSGKFSNV--DAGSTPVPETASV-DFGAWKAKGANAFVAGSVNREPNGQYKVNFI 115

Query: 130 LWDVKDRKQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           L+D   ++ + G    +S      RK  H I+D IYQ + G +G FN+R+ +V  +    
Sbjct: 116 LYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRT--GN 173

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
           + K  L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D    
Sbjct: 174 VYK--LLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDLPTG 229

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R    I N +    AP +S +G+   +++       IYSV        RLT +  I+   
Sbjct: 230 RR-YVISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSIDTEP 288

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTK 365
            YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+  
Sbjct: 289 FYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYIS 348

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +G  F + V          +   +  ++P+++ +G+ ++++R+  G +       D + 
Sbjct: 349 RTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYARQSGGRSVLAAVPSDGSA 408

Query: 426 RNETLINTPAYASDPQWVGFM 446
             + L        +P W  FM
Sbjct: 409 PPQILSVQGGAIREPSWGPFM 429


>gi|152996216|ref|YP_001341051.1| translocation protein TolB [Marinomonas sp. MWYL1]
 gi|189035984|sp|A6VXD7|TOLB_MARMS RecName: Full=Protein tolB; Flags: Precursor
 gi|150837140|gb|ABR71116.1| Tol-Pal system beta propeller repeat TolB [Marinomonas sp. MWYL1]
          Length = 432

 Score =  138 bits (347), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 205/415 (49%), Gaps = 12/415 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHA--FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M    CL ++     F +S  A   +++ + +    P+++    +  +D L   ++++V 
Sbjct: 1   MMFKKCLSVLFTCLIFISSARAQLVIEITSGADQLLPIAVVPFGYEGVDALPEDIAQIVE 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS +F  I + +     +    +  ++DW  L +  +V G + K   ++ R+ F L
Sbjct: 61  ADLARSGLFQPIPRSNMLSMPSKEADV-FYRDWRLLKSDYVVIGAIKKLPNNQYRIGFEL 119

Query: 131 WDVKDRKQIIGKKFFS---SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            +V  +K +  +K  S   S  ++R  AH ISD +Y+ +TG +G F++RIL+V+      
Sbjct: 120 LNVLSQKPV--QKHSSIDVSARNFRDAAHYISDKVYELLTGTRGAFSTRILYVTAEGDKK 177

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L V D DG   + +  S++ IL  P +S + +K+AY  + +     +++ +    
Sbjct: 178 APLFKLQVADADGHRPQVVVESKEPIL-SPSWSMDGRKIAYVMFRNRRP-NIFIQELATG 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  ++I  FR +  AP +S +GK+  + + KD   +IY++D+ +   ER+TN   I+   
Sbjct: 236 KR-QQIAQFRGLNGAPAWSPDGKKLALVLSKDNNPEIYTLDIATQKLERMTNHYAIDTEP 294

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+ PD   IVF SDR G  Q+Y +  N    +R++ + + +    + +P G  +   + +
Sbjct: 295 SWEPDGKGIVFTSDRGGNPQIYRLDVNSKRVERVTFEGDLNTRARM-TPDGRYLVTVQKN 353

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + I +      + ++L E    ++P+ +P+G  ++++    G     + S+D
Sbjct: 354 DGNYHIALQDMKTGRVQILTETYLDESPSIAPNGSMVMYATTYQGKGILAVVSVD 408


>gi|119477235|ref|ZP_01617471.1| translocation protein TolB precursor [marine gamma proteobacterium
           HTCC2143]
 gi|119449598|gb|EAW30836.1| translocation protein TolB precursor [marine gamma proteobacterium
           HTCC2143]
          Length = 429

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 209/411 (50%), Gaps = 22/411 (5%)

Query: 46  SPVSIAFTKFVSIDELGG----KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ 101
           +P +IA   F    E GG     V+ ++  DLQR+  F+ + ++       +   +  F+
Sbjct: 32  NPTAIAIVPFGW--EGGGIPKEDVATIIETDLQRTGQFSPVPKEDMLSTPQDKSEV-YFR 88

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
           DW +L    L+ G+++   +  L+ E+ L+DV  +  ++  +   S  S R IAH ISD 
Sbjct: 89  DWRALNVDYLLVGKLVPTAEG-LQAEYALFDVYTQALVLEDRQTGSAESLRDIAHGISDR 147

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNS--LCVMDRDGANIRYLTPSRDQILFEPRF 219
           +YQ +TG +G F++++L+VS +V  G  + +  L + D DGA  R +  S++ IL  P +
Sbjct: 148 VYQKLTGIRGAFSTKLLYVS-AVGRGDAQYTYRLLISDVDGARERIIFESQEPIL-TPSW 205

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +AY +++      +Y  + R +    ++ NF+ +  AP +S +GK+  + + KD
Sbjct: 206 SPDGETIAYVSFETTRP-AIYSHNLRTNER-SQLTNFKGLNGAPAWSPDGKQLAMVLSKD 263

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + DIY + + +   +R+T    I+   S+ PD   +V+ SDR GK Q+Y +      ++
Sbjct: 264 GSPDIYIMTVATRELKRVTRHFAIDTEPSWMPDGKSLVYTSDRGGKPQIYQVTLASGYEE 323

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           R++ +   +    V    G +I   +  G    I ++  +  +  +L E    ++P+ +P
Sbjct: 324 RVTFEGSYNAKAKVVPAGGGIIMVHRSMGRDH-IALLDIERGKINILTETDLDESPSIAP 382

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFMD 447
           +G  L+++ K  G     L ++ L+G  +  +  P+   D   P W  F++
Sbjct: 383 NGAILLYATKVRGK--GVLAAVSLDGGTKYFM--PSRFGDVREPAWSPFLN 429


>gi|53725631|ref|YP_103660.1| translocation protein TolB [Burkholderia mallei ATCC 23344]
 gi|166998276|ref|ZP_02264136.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei PRL-20]
 gi|262193278|ref|YP_001081486.2| translocation protein TolB [Burkholderia mallei NCTC 10247]
 gi|67461934|sp|Q62I10|TOLB_BURMA RecName: Full=Protein tolB; Flags: Precursor
 gi|52429054|gb|AAU49647.1| tolB protein [Burkholderia mallei ATCC 23344]
 gi|243065356|gb|EES47542.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei PRL-20]
 gi|261826004|gb|ABN03191.2| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei NCTC 10229]
 gi|261835072|gb|ABO06119.2| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei NCTC 10247]
          Length = 433

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 196/444 (44%), Gaps = 18/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F+ +  D+    +    S+  F  W + GA   V G V +E   + +V
Sbjct: 59  SVVRGDLARSGKFSNV--DAGSTPVPETASV-DFGAWKAKGANAFVAGSVNREPNGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S      RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 116 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRT- 174

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
              + K  L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 175 -GNVYK--LLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 229

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV        RLT +  I+
Sbjct: 230 PTGRR-YVISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSID 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIA 362
               YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A
Sbjct: 289 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYNTSPRVSPDGKLLA 348

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   +G  F + V          +   +  ++P+++ +G+ ++++R+  G +       D
Sbjct: 349 YISRTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYARQSGGRSVLAAVPSD 408

Query: 423 LNGRNETLINTPAYASDPQWVGFM 446
            +   + L        +P W  FM
Sbjct: 409 GSAPPQILSVQGGAIREPSWGPFM 432


>gi|121600577|ref|YP_992167.1| translocation protein TolB [Burkholderia mallei SAVP1]
 gi|121229387|gb|ABM51905.1| tolB protein [Burkholderia mallei SAVP1]
          Length = 463

 Score =  137 bits (346), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 196/444 (44%), Gaps = 18/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 33  LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 88

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F+ +  D+    +    S+  F  W + GA   V G V +E   + +V
Sbjct: 89  SVVRGDLARSGKFSNV--DAGSTPVPETASV-DFGAWKAKGANAFVAGSVNREPNGQYKV 145

Query: 127 EFRLWDVKDRKQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S      RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 146 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRT- 204

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
              + K  L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 205 -GNVYK--LLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 259

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV        RLT +  I+
Sbjct: 260 PTGRR-YVISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSID 318

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIA 362
               YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A
Sbjct: 319 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYNTSPRVSPDGKLLA 378

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   +G  F + V          +   +  ++P+++ +G+ ++++R+  G +       D
Sbjct: 379 YISRTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYARQSGGRSVLAAVPSD 438

Query: 423 LNGRNETLINTPAYASDPQWVGFM 446
            +   + L        +P W  FM
Sbjct: 439 GSAPPQILSVQGGAIREPSWGPFM 462


>gi|226952117|ref|ZP_03822581.1| protein TolB precursor [Acinetobacter sp. ATCC 27244]
 gi|226837145|gb|EEH69528.1| protein TolB precursor [Acinetobacter sp. ATCC 27244]
          Length = 427

 Score =  137 bits (345), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 182/365 (49%), Gaps = 35/365 (9%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ--DWNSLGAQVLVTGRVIKEGKD 122
           +  +V  DL RS  F   SQ+     +    S+ + Q  DW + G   +V G+      +
Sbjct: 54  IYPIVESDLNRSGRFTSASQN-----LPATASMNQIQAGDWQNAGVPYVVVGQSKAINAN 108

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
              + ++L+DV+ ++ ++ +         R+  H ISD IYQ++TG  GDF+ RI +V  
Sbjct: 109 TFEIHYQLYDVQKQQYLLNEVLTVPAGRVRQAGHMISDAIYQALTGIPGDFSGRIAYVLR 168

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +  +   + +L + D DG   + +  SRD IL  P ++P+ +K+AY +++ +    +YL 
Sbjct: 169 NQANPAQRYTLQIADTDGEQPKTVLSSRDPIL-SPTWTPDAKKIAYVSFETKRPA-IYLQ 226

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    +  + + +FR +  AP FS +G+  L +       +IY ++L +   +R+TN   
Sbjct: 227 DLATGQR-EVLASFRGLNGAPSFSPDGQSMLFTASMHGNPEIYQMNLNTRQVQRMTNDTA 285

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I+  A YSPD    +F SDR G  Q+Y         +R++       F   ++ +G L A
Sbjct: 286 IDTEARYSPDGKSFIFTSDRGGSPQIYRYTFADKSVRRLT-------FRGAFNARGTLSA 338

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNL------------QAPTWSPSGRSLIFSRKK 410
                G++ A+ V +  GS  ++ ++D N             ++P++SP+G+ ++++  +
Sbjct: 339 ----DGKRLAL-VHRPSGSNYKVALQDINTGITNILTPTSLDESPSFSPNGQMVVYA-TR 392

Query: 411 DGDTG 415
           +G+ G
Sbjct: 393 EGNRG 397


>gi|226705864|sp|B4RTH4|TOLB_ALTMD RecName: Full=Protein tolB; Flags: Precursor
          Length = 451

 Score =  137 bits (344), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 203/454 (44%), Gaps = 31/454 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           L L + LI   F  ++ A +++       +  P+ +   K+     + G +S+VV  DL 
Sbjct: 4   LGLWIALITMAFSANVSASLEIVITEGVDSARPIGVVPFKWKGQGSMPGDISKVVMADLM 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV- 133
           RS  FN +S D   Q     + +  +  W +LG   ++ G +  +G DR  V + L DV 
Sbjct: 64  RSGKFNPVSVDKMPQFPETAEQV-SYTAWATLGVDTVLVGSIEPQGGDRFLVSYELIDVL 122

Query: 134 -------------------KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
                               +   +  ++   +   +R+ AH ISD +Y+ +TG +G F 
Sbjct: 123 KGQVDNGQAKVLKNGSLVSSNNHVLAARQAVINGRDFRQYAHRISDIVYEKLTGVRGAFL 182

Query: 175 SRILFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++I +V       + K   L + D DG N   L  S  + L  P +SP+ +K+AY ++++
Sbjct: 183 TKIAYVIVRDRDTVEKPYQLVIADYDGENETRLL-SSPEPLMSPVWSPDGEKLAYVSFEN 241

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               ++++ D        RI +F  +  +P FS +GK+  + + KD   ++Y +DL +  
Sbjct: 242 RRP-QIFIQDIYTSER-TRITDFPGINSSPTFSPDGKQLAMVLSKDGNPELYVMDLATKN 299

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             R+T    I+   ++ PD S ++F S+R GK Q+Y +  N    +R++   E +     
Sbjct: 300 LRRITRNRAIDTEPAWLPDGSGLIFSSERGGKPQIYSVNLNSGKVRRVTFVGEQN-LGGT 358

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            SP G  +     +   + I     DG   ++L      ++P+ +P+G  +I+S   +G 
Sbjct: 359 LSPDGKQMIMVNQTNGNYHIAKQSLDGGSPQVLTRTYLDESPSVAPNGSMIIYSTLHEGT 418

Query: 414 TGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
               L S+D  GR    L         P W  F+
Sbjct: 419 QVLSLVSLD--GRFKARLPAANGQVKSPSWSPFL 450


>gi|294648349|ref|ZP_06725857.1| TolB protein [Acinetobacter haemolyticus ATCC 19194]
 gi|292825761|gb|EFF84456.1| TolB protein [Acinetobacter haemolyticus ATCC 19194]
          Length = 427

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/365 (26%), Positives = 182/365 (49%), Gaps = 35/365 (9%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ--DWNSLGAQVLVTGRVIKEGKD 122
           +  +V  DL RS  F   SQ+     +    S+ + Q  DW + G   +V G+      +
Sbjct: 54  IYPIVESDLNRSGRFTSASQN-----LPATASMNQIQASDWQNAGVPYVVVGQSKAINAN 108

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
              + ++L+DV+ ++ ++ +         R+  H ISD IYQ++TG  GDF+ RI +V  
Sbjct: 109 TFEIHYQLYDVQKQQYLLNEVLTVPAGRVRQAGHMISDAIYQALTGIPGDFSGRIAYVLR 168

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +  +   + +L + D DG   + +  SRD IL  P ++P+ +K+AY +++ +    +YL 
Sbjct: 169 NQANPAQRYTLQIADTDGEQPKTVLSSRDPIL-SPTWTPDAKKIAYVSFETKRPA-IYLQ 226

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    +  + + +FR +  AP FS +G+  L +       +IY ++L +   +R+TN   
Sbjct: 227 DLATGQR-EVLASFRGLNGAPSFSPDGQSMLFTASMHGNPEIYQMNLNTRQVQRMTNDTA 285

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I+  A YSPD    +F SDR G  Q+Y         +R++       F   ++ +G L A
Sbjct: 286 IDTEARYSPDGKSFIFTSDRGGSPQIYRYTFADKSVRRLT-------FRGAFNARGTLSA 338

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNL------------QAPTWSPSGRSLIFSRKK 410
                G++ A+ V +  GS  ++ ++D N             ++P++SP+G+ ++++  +
Sbjct: 339 ----DGKRLAL-VHRPSGSSYKVALQDINTGITNILTPTSLDESPSFSPNGQMVVYA-TR 392

Query: 411 DGDTG 415
           +G+ G
Sbjct: 393 EGNRG 397


>gi|124514218|gb|EAY55733.1| putative TolB protein [Leptospirillum rubarum]
          Length = 447

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 131/428 (30%), Positives = 209/428 (48%), Gaps = 45/428 (10%)

Query: 11  LNMKINLCLLLVLIGG---FFPTSIHAFVKVATN-SANYSPVSIAFTKFVSIDELGGKVS 66
           LN  + + L+++LIG    F P +    + V TN +A +  +S     +VS+ E     S
Sbjct: 11  LNRVLEIPLIVILIGAALSFPPLARAVNLNVITNQTALFFKLS-----YVSLGERNLSPS 65

Query: 67  EV------VSKDLQRSDVFNLIS-----QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR 115
           EV      + KDL+ +  F L+      Q S        DS+ +    NS G + +   +
Sbjct: 66  EVRYANALIVKDLEETGYFELVPLSSGDQSSLGNMFLTGDSVRKLA--NS-GLEGVAGAQ 122

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           +IK+      V   + D  +   ++ +K+ ++  + R I H   DDI    TG KG  ++
Sbjct: 123 LIKDDLGTHLVGI-VRDPVNGTVLLSRKY-TTTGNIRVIIHRFVDDIVFQFTGFKGVADA 180

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--DD 233
           RI F+ ++   G     L VMD DG  I  LT  R  + + P +S ++  + Y +Y   +
Sbjct: 181 RIAFIGKNRRRGY---DLYVMDFDGEGIHRLTWDR-VLAYTPAWSLSRHLIVYTSYLHSE 236

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR---ALISVQKDEAMDIYSVDLQ 290
             IL   L   R  RAP  +  F  + + P FS N      AL   Q  +  +IYS D++
Sbjct: 237 PQILSYDLSTGR--RAP--LARFPGLNITPNFSRNSAMLAMALSKSQTSQNTEIYSYDMK 292

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            +  ERLT +   N+S S+SPD SQIVF SDR+G  Q++VM S+GS++ RIS      ++
Sbjct: 293 VHRFERLTYSHSNNLSPSWSPDGSQIVFVSDRDGHPQIFVMDSDGSNEHRIS---FTGFY 349

Query: 351 D--PVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIF 406
           +  P WSP+GD IA+   +   +  I +    G +   L   S    +P WSP GR+++F
Sbjct: 350 NVSPSWSPRGDAIAYVCMNERHRPKICLTTPTGDRSLQLTHGSGQDDSPDWSPDGRTILF 409

Query: 407 SRKKDGDT 414
           + +  G +
Sbjct: 410 THQVKGHS 417


>gi|148244622|ref|YP_001219316.1| biopolymer transport protein TolB [Candidatus Vesicomyosocius
           okutanii HA]
 gi|166229993|sp|A5CWT2|TOLB_VESOH RecName: Full=Protein tolB; Flags: Precursor
 gi|146326449|dbj|BAF61592.1| biopolymer transport protein TolB [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 424

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 107/401 (26%), Positives = 200/401 (49%), Gaps = 22/401 (5%)

Query: 20  LLVLIGGFFPTSIHAFVKVAT--NSANYSPVSIAFTKFVSIDELGGKV-SEVVSKDLQRS 76
            +V I   + T   A ++V       N  P+ I+   FV  D   GKV ++++  +  RS
Sbjct: 4   FIVFILSLYTTLSWAVLEVTIFKQEENTFPIVIS-DFFVVGDASQGKVIADIMRNNFNRS 62

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++++ +   +      S P F  W +   + +V G++ K  K    VE  L DV  +
Sbjct: 63  GEFSVVNANYIIR------SKPSFDKWKAKKIEAIVLGKLEKISKKIFNVEIELLDVYSK 116

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS---GIIKNSL 193
           K +    F    +  R+IAH +SD IY ++ G++G FN+R+ +++  V++   G  +  L
Sbjct: 117 KTLYKDIFTVHNSGIRRIAHYLSDQIYHALLGKRGFFNTRLAYIT--VINKDKGEREYRL 174

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            + D D  N + +  SR+ +L  P +SP Q K+AY ++ +     V++    I R  +++
Sbjct: 175 EISDSDAQNPQTILKSREPLL-SPVWSPKQDKIAYVSFKNSR-SEVFIQYPFIRRKIQKL 232

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             F  +  +P +  NG+  L+++ K+   DIYS  L S    RLT  + I+  ASYSPD 
Sbjct: 233 PYFDGIASSPSWHPNGEILLLTLSKNGNKDIYSYQLSSKKLTRLTIDMGIDTEASYSPDG 292

Query: 314 SQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           ++I+F S+R G+ Q+Y+  +++N  ++        A     V+SP G  +       + +
Sbjct: 293 NKIIFTSNRSGQVQVYIKDLKTNKINRATFKGRYNA---QAVFSPDGKSLIMVHKIDQDY 349

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            I ++       +++  +   ++P +SP+G  +IF+  + G
Sbjct: 350 RIALLDIATKDLKVMTNNQLDESPFFSPNGDMIIFATNQGG 390



 Score = 39.7 bits (91), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 6/116 (5%)

Query: 317 VFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           V   D+  +E +L +  S+  + + I + +E     PVWSP+ D IA+  F   +  + +
Sbjct: 162 VINKDKGEREYRLEISDSDAQNPQTILKSREP-LLSPVWSPKQDKIAYVSFKNSRSEVFI 220

Query: 376 MKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                 +  ++L   D    +P+W P+G  L+ +  K+G+    +YS  L+ +  T
Sbjct: 221 QYPFIRRKIQKLPYFDGIASSPSWHPNGEILLLTLSKNGN--KDIYSYQLSSKKLT 274


>gi|119896708|ref|YP_931921.1| translocation protein TolB [Azoarcus sp. BH72]
 gi|166229974|sp|A1K2H9|TOLB_AZOSB RecName: Full=Protein tolB; Flags: Precursor
 gi|119669121|emb|CAL93034.1| putative translocation protein TolB [Azoarcus sp. BH72]
          Length = 427

 Score =  136 bits (343), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 198/417 (47%), Gaps = 22/417 (5%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
           S  A + +    A  S   +    F +   L   VS++V  DL+RS +F+L+        
Sbjct: 22  SAQAQLSIEITGAGASRFPVIIPVFENEASLPRSVSDIVRADLERSGLFSLVDIG----P 77

Query: 91  ITNPDS-IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
           +  P+  IP      S GA   +   V  +G  R  + FRL+D + + ++       + A
Sbjct: 78  LPLPEGQIPDLGSLRSRGADAALAASVFPQGDGRYEIRFRLFDTQKQTELGALALRMTAA 137

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
             R  AH I+D +Y+ +TG  G F +RI +V    V    +  L V D DG N +    S
Sbjct: 138 QNRITAHRIADFVYEKLTGLPGYFATRIAYV----VKTGPRYELQVADADGMNAQAALVS 193

Query: 210 RDQILFEPRFSPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           R+ I+  P +SP+  ++AY +++  + I+ V+ + T   +    + NF+    AP +S +
Sbjct: 194 REPII-SPAWSPDGGRLAYVSFEAKKPIIYVHTLATGQRQV---VANFKGSNSAPAWSPD 249

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G++  + + KD    +Y ++   +   RL ++  I+   ++SPD   I F SDR G  Q+
Sbjct: 250 GQQLSVVLTKDGLSQLYVLNADGSGVRRLASSSGIDTEPAWSPDGQWIYFTSDRGGSPQI 309

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Y + + G   +R++ D     ++    P  D  L+AF   +  +F + V      Q  +L
Sbjct: 310 YRIPTAGGAAQRVTFD---GTYNVTARPSADGRLLAFITRNNGRFQVAVQDLTTRQTTIL 366

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQW 442
            + +  ++P+++P+GR ++++    G     L ++  +GR +  ++  A    +P W
Sbjct: 367 TDSARDESPSFAPNGRMILYATDAGGR--GVLAAVSSDGRVKQRLSVQAADVREPAW 421


>gi|158522221|ref|YP_001530091.1| beta-propeller repeat-containing to-pal system protein TolB
           [Desulfococcus oleovorans Hxd3]
 gi|226705875|sp|A8ZUI2|TOLB_DESOH RecName: Full=Protein tolB; Flags: Precursor
 gi|158511047|gb|ABW68014.1| Tol-Pal system beta propeller repeat TolB [Desulfococcus oleovorans
           Hxd3]
          Length = 438

 Score =  136 bits (342), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 191/397 (48%), Gaps = 46/397 (11%)

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP------RFQDWNSLGAQVLVTGRVIKE 119
           +++++  L+ +  FNLI++ +F ++   PD           ++W  +GA+ L+TG V   
Sbjct: 60  ADLLADTLEFTRYFNLINRAAFLER---PDRTGVTLADIDCKNWRDIGAEFLITGGVTVA 116

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           G   + +E RL+DV   + I+GKK+   P   RK+      ++ + +TG  G F SRI F
Sbjct: 117 G-GMMEMELRLFDVFKERMILGKKYKGKPVDQRKMIRRFCAEVMEQLTGTPGIFESRIAF 175

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--DDEDIL 237
           +S    +G     +   + DG N + +T     I   P +S + Q +AY +Y     D+ 
Sbjct: 176 IS----TGDGSKEIYACEFDGYNPQRIT-RNSSINLSPAWSSDGQWLAYTSYRKGGPDLY 230

Query: 238 RVYLMDTR--------IDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +L + R        I+ AP  + G F   +LA         A +S + D+  +IY + 
Sbjct: 231 ITHLTENRGTVFSKEGINIAPSWVPGQF---MLA---------ATLSFEGDQ--EIYLLT 276

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  RLT +  I++S ++SPD  ++ F S R G  Q+++M       +R++   E  
Sbjct: 277 GSGTVVRRLTRSWGIDVSPTFSPDGKRMAFVSGRAGSPQIFIMDMGSGRTQRLT--FEGG 334

Query: 349 Y-FDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           Y  +P W+P  D IA+   +G  F + V+  K G+   L  +  + ++P+WSP G  + F
Sbjct: 335 YNTNPSWNPVNDTIAYCAMTGGAFNVRVIDVKTGATVALTADQGDNESPSWSPDGSLIAF 394

Query: 407 SRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQW 442
           S  ++    S++Y +   G +   L+  P   + P+W
Sbjct: 395 SSTREAGV-SRIYVMTAAGTDPRRLLILPGEQTGPKW 430


>gi|73540499|ref|YP_295019.1| translocation protein TolB [Ralstonia eutropha JMP134]
 gi|119371052|sp|Q474K8|TOLB_RALEJ RecName: Full=Protein tolB; Flags: Precursor
 gi|72117912|gb|AAZ60175.1| TolB, N-terminal:WD40-like Beta Propeller [Ralstonia eutropha
           JMP134]
          Length = 450

 Score =  135 bits (341), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 193/415 (46%), Gaps = 18/415 (4%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD-VFNLISQDSFKQKITNP 94
           + V  +    S + +A   F    +    ++ ++  DL RS  + N+    +   +  N 
Sbjct: 49  LNVEISGVGASQIPVATANFQGEAQAPQNLTAIIRSDLARSGRLRNVDPGGATVAESANV 108

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
           D       W S GA   V G V   G  +  V FRL+D    + + G  F  +    R  
Sbjct: 109 D----LGSWKSRGADAFVAGSVTPSGNGQYEVRFRLYDTVKGQSLGGLAFNVNQGQLRVT 164

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH I+D IY+ + GE+G F +R+ +VS   V G  +  L + D DG N +    S + I+
Sbjct: 165 AHKIADYIYEKLLGERGVFATRLSYVSR--VGG--RYQLLISDSDGQNSQVALTSNEPII 220

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+ ++VAY +++ +  + VY+ D    +    + N +    AP +S +G+   +
Sbjct: 221 -SPSWSPDGRRVAYVSFEAKKPV-VYVHDLATGKR-TLVSNQKGNNSAPSWSPDGQHLAV 277

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ +D    +Y V+   +   RLT +  I+    YSPD   I F SDR G  Q+Y M + 
Sbjct: 278 ALSRDGNTQVYQVNADGSGIRRLTRSSAIDTEPQYSPDGKSIYFTSDRGGAPQVYRMPAG 337

Query: 335 GSDQKRISQDK-EASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           G +     +   + SY   P  SP G  +A+   SG  F + +          L + SN 
Sbjct: 338 GEEAGSAQRVTFKGSYNVSPRISPDGKYLAYITRSG-GFKLQLQDLTNGDVTSLTDTSND 396

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVGFM 446
           +AP+++ +G+ ++++ +  G   S L ++  +GR   +++  +    +P W  FM
Sbjct: 397 EAPSFAANGKYILYATRVGGR--SVLAAVSTDGRTRQVLSLQSGDVREPSWGPFM 449


>gi|239995973|ref|ZP_04716497.1| Periplasmic component of the Tol biopolymer transport system
           [Alteromonas macleodii ATCC 27126]
          Length = 451

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 205/460 (44%), Gaps = 43/460 (9%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           L L + LI   F   + A +++       +  P+ +   K+     + G +S+VV  DL 
Sbjct: 4   LGLWIALITMAFSAKVFASLEIVITEGVDSARPIGVVPFKWKGQGSMPGDISKVVMADLM 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV- 133
           RS  FN +S D   Q     + +  F  W +LG   ++ G +  +G DR  V + L DV 
Sbjct: 64  RSGKFNPVSVDKMPQYPETAEQV-SFTAWATLGVDTVLVGSIEPQGGDRYLVSYELIDVL 122

Query: 134 ------------KD-------------RKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
                       KD             R+ +I  + F      R+ AH ISD +Y+ +TG
Sbjct: 123 KGQVDNGQAKVLKDGNLVSSNDHVLAARQAVINGRDF------RQYAHRISDIVYEKLTG 176

Query: 169 EKGDFNSRILFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            +G F ++I +V       + K   L + D DG N   L  S  + L  P +SP+ +K+A
Sbjct: 177 VRGAFLTKIAYVIVRDRDTVEKPYQLVIADYDGENETRLL-SSPEPLMSPVWSPDGEKLA 235

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y ++++    ++++ +        RI +F  +  +P FS +GK+  + + KD   ++Y +
Sbjct: 236 YVSFENRRP-QIFIQNIYTSER-TRITDFPGINSSPVFSPDGKQLAMVLSKDGNPELYVM 293

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           DL +    R+T    I+   ++ PD S ++F S+R GK Q+Y +  N    +R++   E 
Sbjct: 294 DLATKNLRRVTRNRAIDTEPAWLPDGSGLIFSSERGGKPQIYSVNLNSGKVRRVTFVGEQ 353

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +    + SP G  +     +   + I     DG   ++L      ++P+ +P+G  +I+S
Sbjct: 354 NLGGTI-SPDGKQMIMVNQTNGNYHIAKQSLDGGSPQVLTRTYLDESPSVAPNGSMIIYS 412

Query: 408 RKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
              +G     L S+D  GR    L         P W  F+
Sbjct: 413 TLHEGTQVLSLVSLD--GRFKARLPAANGQVKSPSWSPFL 450


>gi|262193458|ref|YP_003264667.1| hypothetical protein Hoch_0133 [Haliangium ochraceum DSM 14365]
 gi|262076805|gb|ACY12774.1| WD40 domain protein beta Propeller [Haliangium ochraceum DSM 14365]
          Length = 445

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 181/367 (49%), Gaps = 22/367 (5%)

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           +V+  DL  S  F ++   SF   +       + Q W  +GA  ++  R+ + G ++   
Sbjct: 71  KVMDFDLAVSGWFEVLDPRSFLADLRTEGLGIQPQKWKDVGAFGVIKHRISRSG-NQYTF 129

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E RL++V+     +  K +      R + H   +D+ +  TGE+G F S++ FV+     
Sbjct: 130 EGRLYEVEKGSAAVLIKTYRG-GDLRALVHNFCNDVVEHYTGERGFFGSKMAFVTR---- 184

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFSPNQQKVAYATY--DDEDILRVYLMD 243
           G     +  MD DG  +R LT  R+  L   P +SP+  KVA+ +Y  ++ D+  V    
Sbjct: 185 GSGGKQVMAMDFDGHGVRSLT--RNSSLNILPSWSPDGSKVAFTSYMRNNPDLYVVGAGG 242

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLF 302
            R    P RI     M     +S +G +  +++ KD   +IY +   S A  +RLTN   
Sbjct: 243 GR----PNRISKQSGMNTGASWSPDGSKIAVTLSKDGNPEIYIISASSGAILQRLTNDRA 298

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGD-- 359
           I+ S ++SPD  +I F SDR G  Q++VM + G   +R+S++   SY   PVWSP+ D  
Sbjct: 299 IDTSPAWSPDGREIAFVSDRHGGPQIFVMSAAGGSPRRVSRN--GSYNTTPVWSPRKDKR 356

Query: 360 LIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           ++A+T   G  F I  +    G   R+     + + P++SP+GR++ F+ ++    G  +
Sbjct: 357 MLAYTTRDGGTFDIVTLDLGTGDMVRITQGQGSNEEPSFSPNGRAIAFASERREGAGIYI 416

Query: 419 YSIDLNG 425
            + D +G
Sbjct: 417 ANADGSG 423



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 28/173 (16%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           + ++D   +    LT    +NI  S+SPD S++ F S       LYV+ + G    RIS+
Sbjct: 191 VMAMDFDGHGVRSLTRNSSLNILPSWSPDGSKVAFTSYMRNNPDLYVVGAGGGRPNRISK 250

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN---LQ------- 393
            +        WSP G  IA T           + KDG+ E  ++  S+   LQ       
Sbjct: 251 -QSGMNTGASWSPDGSKIAVT-----------LSKDGNPEIYIISASSGAILQRLTNDRA 298

Query: 394 ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQW 442
              +P WSP GR + F   + G  G +++ +   G +   ++   +Y + P W
Sbjct: 299 IDTSPAWSPDGREIAFVSDRHG--GPQIFVMSAAGGSPRRVSRNGSYNTTPVW 349



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 7/159 (4%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           GA ++ LT  R  I   P +SP+ +++A+ + D     ++++M      +P+R+    S 
Sbjct: 287 GAILQRLTNDR-AIDTSPAWSPDGREIAFVS-DRHGGPQIFVMSA-AGGSPRRVSRNGSY 343

Query: 260 ILAPRFSS-NGKRALISVQKDEA-MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              P +S    KR L    +D    DI ++DL +    R+T     N   S+SP+   I 
Sbjct: 344 NTTPVWSPRKDKRMLAYTTRDGGTFDIVTLDLGTGDMVRITQGQGSNEEPSFSPNGRAIA 403

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           F S+R     +Y+  ++GS  +R      A+  D  W P
Sbjct: 404 FASERREGAGIYIANADGSGTQRRVYSGVATSID--WGP 440


>gi|167618866|ref|ZP_02387497.1| translocation protein TolB [Burkholderia thailandensis Bt4]
 gi|257138090|ref|ZP_05586352.1| translocation protein TolB [Burkholderia thailandensis E264]
 gi|118574574|sp|Q2SYT0|TOLB_BURTA RecName: Full=Protein tolB; Flags: Precursor
          Length = 433

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 195/444 (43%), Gaps = 18/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  +  D+    +    S+  F  W + GA   V G V +E   + +V
Sbjct: 59  SIVRADLARSGKFTNV--DAGGTPVPETASV-DFGAWKAKGANAFVAGSVSREPNGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S      RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 116 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRT- 174

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
              + K  L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 175 -GNVYK--LLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 229

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV    +   RLT +  I+
Sbjct: 230 PTGRR-YVISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGSGLHRLTRSSSID 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIA 362
               YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A
Sbjct: 289 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAGGESAGAAQRVTFTGSYNTSPRISPDGKLLA 348

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       D
Sbjct: 349 YISRTGGGFKLYVQDLQTGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPSD 408

Query: 423 LNGRNETLINTPAYASDPQWVGFM 446
            +   + L        +P W  FM
Sbjct: 409 GSAPPQILSVQGGAIREPSWGPFM 432


>gi|187251684|ref|YP_001876166.1| putative component of the Tol biopolymer transport system
           [Elusimicrobium minutum Pei191]
 gi|186971844|gb|ACC98829.1| Putative component of the Tol biopolymer transport system
           [Elusimicrobium minutum Pei191]
          Length = 428

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 213/437 (48%), Gaps = 30/437 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSP-VSIAFTKFVSIDELGGKVSEVVSKDLQR 75
           L +LL+            ++ +A+   N  P + IA  K+   DE G K +    +D+ R
Sbjct: 9   LAMLLICTAAISYAQSDVYIGIASRGGNALPKLGIAQFKY---DE-GSKKAAAQVRDIMR 64

Query: 76  SDVFNLISQDSFKQ--KITNPDSIPRFQDWN-SLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           +D+      D  ++  KI   + +   ++W  +  ++ ++ G V  EG+D + +   +++
Sbjct: 65  ADLMFSRHFDISEKGPKIDTANIVKTLEEWQKNTFSEFVLYGEVSSEGEDFI-INIFIYN 123

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
             ++K +  + +     + R+++H  SD + + +TG++G  ++RI F +    S      
Sbjct: 124 TSEKKPVFARSYRGKENALRRLSHIASDQVVKELTGKRGIADTRIAFAN----SATGNKE 179

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--DDEDILRVYLMDTRIDRAP 250
           + + D DGAN++ LT  R  I   PR+S +  K+ Y +Y   + D+  + L   ++  +P
Sbjct: 180 IYIADYDGANLKKLTTDR-SIALLPRWSKDG-KIYYTSYRYKNPDVFSIDLAAGKV--SP 235

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             I   + + L    S +G+  +++        I+ ++L++  + +LT+   ++ S SYS
Sbjct: 236 VAI--TKGLELIGGVSPDGRSIILTRSGGTNPSIFEINLETGKSVQLTDKAGVDGSPSYS 293

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGE 369
           PD   I F S+R G  Q+YVM       +RI+     ++ D P WSP G+ I F   +  
Sbjct: 294 PDGRFITFVSNRSGNPQIYVMDLQNGSTRRITS--SLNWADTPQWSPTGEWIVFAGRTAA 351

Query: 370 KFAIGVMKKD--GSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +  I +   D  G+Q R L  DS N + PTWSP GR + F+  + G    +LY +D +G 
Sbjct: 352 QNPIDIFLVDITGTQIRQLTSDSANNEDPTWSPDGRFIAFTTTRKGR--RQLYVMDADGS 409

Query: 427 NETLI-NTPAYASDPQW 442
              L+ + P  +  P W
Sbjct: 410 APHLLADIPGNSYTPHW 426


>gi|126440889|ref|YP_001060215.1| translocation protein TolB [Burkholderia pseudomallei 668]
 gi|126451941|ref|YP_001067479.1| translocation protein TolB [Burkholderia pseudomallei 1106a]
 gi|134280578|ref|ZP_01767289.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei 305]
 gi|217420955|ref|ZP_03452460.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei 576]
 gi|237813605|ref|YP_002898056.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei MSHR346]
 gi|254191662|ref|ZP_04898165.1| putative TolB protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254258828|ref|ZP_04949882.1| putative TolB protein [Burkholderia pseudomallei 1710a]
 gi|254299065|ref|ZP_04966515.1| putative TolB protein [Burkholderia pseudomallei 406e]
 gi|126220382|gb|ABN83888.1| putative TolB protein [Burkholderia pseudomallei 668]
 gi|126225583|gb|ABN89123.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei 1106a]
 gi|134248585|gb|EBA48668.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei 305]
 gi|157809130|gb|EDO86300.1| putative TolB protein [Burkholderia pseudomallei 406e]
 gi|157939333|gb|EDO95003.1| putative TolB protein [Burkholderia pseudomallei Pasteur 52237]
 gi|217396367|gb|EEC36384.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei 576]
 gi|237506221|gb|ACQ98539.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei MSHR346]
 gi|254217517|gb|EET06901.1| putative TolB protein [Burkholderia pseudomallei 1710a]
          Length = 430

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 194/441 (43%), Gaps = 18/441 (4%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+ VV
Sbjct: 3   KLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVTSVV 58

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
             DL RS  F+ +  D+    +    S+  F  W + GA   V G V +E   + +V F 
Sbjct: 59  RGDLARSGKFSNV--DAGSTPVPETASV-DFGAWKAKGANAFVAGSVNREPNGQYKVNFI 115

Query: 130 LWDVKDRKQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           L+D   ++ + G    +S      RK  H I+D IYQ + G +G FN+R+ +V  +    
Sbjct: 116 LYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRT--GN 173

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
           + K  L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D    
Sbjct: 174 VYK--LLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDLPTG 229

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R    I N +    AP +S +G+   +++       IYSV        RLT +  I+   
Sbjct: 230 RR-YVISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSIDTEP 288

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTK 365
            YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+  
Sbjct: 289 FYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYIS 348

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       D + 
Sbjct: 349 RTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPSDGSA 408

Query: 426 RNETLINTPAYASDPQWVGFM 446
             + L        +P W  FM
Sbjct: 409 PPQILSVQGGAIREPSWGPFM 429


>gi|167580763|ref|ZP_02373637.1| translocation protein TolB [Burkholderia thailandensis TXDOH]
          Length = 433

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 195/444 (43%), Gaps = 18/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  +  D+    +    S+  F  W + GA   V G V +E   + +V
Sbjct: 59  SIVRADLARSGKFTNV--DAGGTPVPETASV-DFGAWKAKGANAFVAGSVSREPNGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S      RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 116 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRT- 174

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
              + K  L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 175 -GNVYK--LLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 229

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV    +   RLT +  I+
Sbjct: 230 PTGRR-YVISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSSGSGLRRLTRSSSID 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIA 362
               YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A
Sbjct: 289 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAGGESAGAAQRVTFTGSYNTSPRISPDGKLLA 348

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       D
Sbjct: 349 YISRTGGGFKLYVQDLQTGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPSD 408

Query: 423 LNGRNETLINTPAYASDPQWVGFM 446
            +   + L        +P W  FM
Sbjct: 409 GSAPPQILSVQGGAIREPSWGPFM 432


>gi|15641838|ref|NP_231470.1| translocation protein TolB [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121727646|ref|ZP_01680749.1| tolB protein [Vibrio cholerae V52]
 gi|147674437|ref|YP_001217372.1| translocation protein TolB [Vibrio cholerae O395]
 gi|153214273|ref|ZP_01949290.1| tolB protein [Vibrio cholerae 1587]
 gi|153800415|ref|ZP_01955001.1| tolB protein [Vibrio cholerae MZO-3]
 gi|153828587|ref|ZP_01981254.1| tolB protein [Vibrio cholerae 623-39]
 gi|227081965|ref|YP_002810516.1| tolB protein [Vibrio cholerae M66-2]
 gi|229508067|ref|ZP_04397572.1| TolB protein precursor [Vibrio cholerae BX 330286]
 gi|229511694|ref|ZP_04401173.1| TolB protein precursor [Vibrio cholerae B33]
 gi|229515216|ref|ZP_04404676.1| TolB protein precursor [Vibrio cholerae TMA 21]
 gi|229518833|ref|ZP_04408276.1| TolB protein precursor [Vibrio cholerae RC9]
 gi|229523854|ref|ZP_04413259.1| TolB protein precursor [Vibrio cholerae bv. albensis VL426]
 gi|229529141|ref|ZP_04418531.1| TolB protein precursor [Vibrio cholerae 12129(1)]
 gi|229607628|ref|YP_002878276.1| translocation protein TolB [Vibrio cholerae MJ-1236]
 gi|254848922|ref|ZP_05238272.1| tolB protein [Vibrio cholerae MO10]
 gi|255745402|ref|ZP_05419351.1| TolB protein precursor [Vibrio cholera CIRS 101]
 gi|297579355|ref|ZP_06941283.1| tolB protein [Vibrio cholerae RC385]
 gi|298498125|ref|ZP_07007932.1| tol-Pal system beta propeller repeat protein TolB [Vibrio cholerae
           MAK 757]
 gi|32699719|sp|Q9KR11|TOLB_VIBCH RecName: Full=Protein tolB; Flags: Precursor
 gi|172047657|sp|A5F753|TOLB_VIBC3 RecName: Full=Protein tolB; Flags: Precursor
 gi|254764844|sp|C3LND9|TOLB_VIBCM RecName: Full=Protein tolB; Flags: Precursor
 gi|10441440|gb|AAG17042.1|AF187269_4 TolB [Vibrio cholerae O395]
 gi|9656363|gb|AAF94984.1| tolB protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121630033|gb|EAX62440.1| tolB protein [Vibrio cholerae V52]
 gi|124115421|gb|EAY34241.1| tolB protein [Vibrio cholerae 1587]
 gi|124124041|gb|EAY42784.1| tolB protein [Vibrio cholerae MZO-3]
 gi|146316320|gb|ABQ20859.1| tolB protein [Vibrio cholerae O395]
 gi|148875982|gb|EDL74117.1| tolB protein [Vibrio cholerae 623-39]
 gi|227009853|gb|ACP06065.1| tolB protein [Vibrio cholerae M66-2]
 gi|227013735|gb|ACP09945.1| tolB protein [Vibrio cholerae O395]
 gi|229332915|gb|EEN98401.1| TolB protein precursor [Vibrio cholerae 12129(1)]
 gi|229337435|gb|EEO02452.1| TolB protein precursor [Vibrio cholerae bv. albensis VL426]
 gi|229343522|gb|EEO08497.1| TolB protein precursor [Vibrio cholerae RC9]
 gi|229347921|gb|EEO12880.1| TolB protein precursor [Vibrio cholerae TMA 21]
 gi|229351659|gb|EEO16600.1| TolB protein precursor [Vibrio cholerae B33]
 gi|229355572|gb|EEO20493.1| TolB protein precursor [Vibrio cholerae BX 330286]
 gi|229370283|gb|ACQ60706.1| TolB protein precursor [Vibrio cholerae MJ-1236]
 gi|254844627|gb|EET23041.1| tolB protein [Vibrio cholerae MO10]
 gi|255737232|gb|EET92628.1| TolB protein precursor [Vibrio cholera CIRS 101]
 gi|297536949|gb|EFH75782.1| tolB protein [Vibrio cholerae RC385]
 gi|297542458|gb|EFH78508.1| tol-Pal system beta propeller repeat protein TolB [Vibrio cholerae
           MAK 757]
 gi|327484391|gb|AEA78798.1| tolB protein precursor [Vibrio cholerae LMA3894-4]
          Length = 450

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 214/456 (46%), Gaps = 36/456 (7%)

Query: 17  LCLLLVLIG-GFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           L  +L+LIG GF   +  A   V T+  + + P++I   K+    +L   VS V++ DLQ
Sbjct: 5   LVFVLMLIGTGFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIASDLQ 64

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV- 133
           RS  F+ +      Q   + + +  F  W S+G   L+TG + +  +    + ++L D+ 
Sbjct: 65  RSGKFSPVPTSKMPQTPYSEEQV-NFGKWTSMGVDSLLTGTITQNAEGSYVISYQLVDIV 123

Query: 134 -------------KDRKQIIGK------KFFSSPAS-WRKIAHTISDDIYQSITGEKGDF 173
                        +D + ++ K      K  + PAS  R+ AH I+D +Y+ +TGE+G F
Sbjct: 124 RGQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGAF 183

Query: 174 NSRILFVSESVVSG--IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +RI +V   VV+        L + D DG N R +  S+ Q L  P +SP+ Q +AY ++
Sbjct: 184 LTRIAYV---VVNDKDPYPYQLRIADYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYVSF 239

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +     +Y+M+    +  +++ +F     APRFS +GK   + + K   + +Y++DL +
Sbjct: 240 QNGQA-EIYMMNIYSGKR-EKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLAT 297

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                +T+    N    + PD   ++F SDR GK Q+Y +  +G + KR++     +   
Sbjct: 298 RRLTEVTSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLGG 357

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            + +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S   +
Sbjct: 358 QI-TPDGKFLVMVNRSDSGFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYN 416

Query: 412 GDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
                 + SID  GR    L  T      P W  F+
Sbjct: 417 KANVLSMVSID--GRFKARLPATNGRVRAPAWSPFL 450


>gi|53720374|ref|YP_109360.1| translocation protein TolB [Burkholderia pseudomallei K96243]
 gi|167720990|ref|ZP_02404226.1| translocation protein TolB [Burkholderia pseudomallei DM98]
 gi|167739947|ref|ZP_02412721.1| translocation protein TolB [Burkholderia pseudomallei 14]
 gi|167817184|ref|ZP_02448864.1| translocation protein TolB [Burkholderia pseudomallei 91]
 gi|167825597|ref|ZP_02457068.1| translocation protein TolB [Burkholderia pseudomallei 9]
 gi|167847081|ref|ZP_02472589.1| translocation protein TolB [Burkholderia pseudomallei B7210]
 gi|167895665|ref|ZP_02483067.1| translocation protein TolB [Burkholderia pseudomallei 7894]
 gi|167904058|ref|ZP_02491263.1| translocation protein TolB [Burkholderia pseudomallei NCTC 13177]
 gi|167912315|ref|ZP_02499406.1| translocation protein TolB [Burkholderia pseudomallei 112]
 gi|167920272|ref|ZP_02507363.1| translocation protein TolB [Burkholderia pseudomallei BCC215]
 gi|254194869|ref|ZP_04901299.1| putative TolB protein [Burkholderia pseudomallei S13]
 gi|67461935|sp|Q63RA8|TOLB_BURPS RecName: Full=Protein tolB; Flags: Precursor
 gi|118574573|sp|Q3JP75|TOLB_BURP1 RecName: Full=Protein tolB; Flags: Precursor
 gi|52210788|emb|CAH36772.1| putative periplasmic TolB protein [Burkholderia pseudomallei
           K96243]
 gi|169651618|gb|EDS84311.1| putative TolB protein [Burkholderia pseudomallei S13]
          Length = 433

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 195/444 (43%), Gaps = 18/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F+ +  D+    +    S+  F  W + GA   V G V +E   + +V
Sbjct: 59  SVVRGDLARSGKFSNV--DAGSTPVPETASV-DFGAWKAKGANAFVAGSVNREPNGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S      RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 116 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRT- 174

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
              + K  L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 175 -GNVYK--LLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 229

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV        RLT +  I+
Sbjct: 230 PTGRR-YVISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSID 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIA 362
               YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A
Sbjct: 289 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYNTSPRVSPDGKLLA 348

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       D
Sbjct: 349 YISRTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPSD 408

Query: 423 LNGRNETLINTPAYASDPQWVGFM 446
            +   + L        +P W  FM
Sbjct: 409 GSAPPQILSVQGGAIREPSWGPFM 432


>gi|77360809|ref|YP_340384.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Pseudoalteromonas
           haloplanktis TAC125]
 gi|119371051|sp|Q3IJ16|TOLB_PSEHT RecName: Full=Protein tolB; Flags: Precursor
 gi|76875720|emb|CAI86941.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 452

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 204/455 (44%), Gaps = 87/455 (19%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           CL+L+L  GF   +  A   V T   + + P++I   K+  I  +  K+SEV++ DL RS
Sbjct: 9   CLILLL--GFQGVANAALEIVITEGIDGARPIAIVPFKYQGIGPIPQKISEVIAADLMRS 66

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F  +      Q+ +  DS   +  W + G + ++ G V ++   R  V + L DV  R
Sbjct: 67  GKFKPVDVAQMPQQPSK-DSDINYASWVNKGVEAILVGEVEQQSNGRYLVRYELVDVI-R 124

Query: 137 KQIIG---------------------KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            QI G                     ++   S   +R+ +H ISD IY+ +TGEKG F +
Sbjct: 125 GQITGGQTQMMTNGKLIKNQDHILEARESIISDTGFRRYSHRISDVIYEKLTGEKGAFLT 184

Query: 176 RILFVSESVVSGIIKNS------LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +I +V       I++++      L V D DG N + L  S++  L  P +SP+  K+AY 
Sbjct: 185 KIAYV-------IVRDNDDRPYQLVVSDYDGFNEQVLLRSKEP-LMSPAWSPDGTKLAYV 236

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSV 287
           T+++    ++Y+ D    +  + + ++  +  AP+FS +GK+ L+ + KD+  A ++Y +
Sbjct: 237 TFENRQS-QIYIQDLYSGKR-ELVTSYPGINGAPQFSPDGKKLLLVLSKDKTGATEVYLL 294

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           DL +    RLT    I+   S+ P+   IVF S+R G  Q+Y +       +R+S D + 
Sbjct: 295 DLVTRKETRLTRHRSIDTEPSWHPNGQDIVFTSERGGNAQIYKLNLKTGRTQRLSFDGDM 354

Query: 348 SYF------------------------------------------DPVWSPQGDLIAFTK 365
           +                                             P  +P G +I ++ 
Sbjct: 355 NLAGSITPDGKELVMVNRTNGQYHLAKKELATGAFQVLTRTRLDESPSIAPNGSMIIYST 414

Query: 366 FSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
               K  + ++  DG  + RL V D  ++AP WSP
Sbjct: 415 LHNNKQVLALVSMDGRFKARLPVLDGQVKAPAWSP 449



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 71/154 (46%), Gaps = 6/154 (3%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEASYF 350
           + R+++ ++  ++       ++I +   R+  +   QL V   +G +++ + + KE    
Sbjct: 164 SHRISDVIYEKLTGEKGAFLTKIAYVIVRDNDDRPYQLVVSDYDGFNEQVLLRSKEP-LM 222

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRK 409
            P WSP G  +A+  F   +  I +      +  L+     +  AP +SP G+ L+    
Sbjct: 223 SPAWSPDGTKLAYVTFENRQSQIYIQDLYSGKRELVTSYPGINGAPQFSPDGKKLLLVLS 282

Query: 410 KDGDTGSKLYSIDLNGRNET-LINTPAYASDPQW 442
           KD    +++Y +DL  R ET L    +  ++P W
Sbjct: 283 KDKTGATEVYLLDLVTRKETRLTRHRSIDTEPSW 316


>gi|226330928|ref|ZP_03806446.1| hypothetical protein PROPEN_04851 [Proteus penneri ATCC 35198]
 gi|225201723|gb|EEG84077.1| hypothetical protein PROPEN_04851 [Proteus penneri ATCC 35198]
          Length = 432

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 210/450 (46%), Gaps = 27/450 (6%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVA-TNSANYS-PVSIAFTKFVSIDELGG 63
            + + LN+   L +L V       T  +A V++  T   N + P+ +   K+    ++  
Sbjct: 1   MMKQALNVIFGLLILCVT------TLANAEVRIEITQGVNTARPIGVVPFKWEGTGQMPE 54

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQK-ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
            ++ V++ DL+ S  FN I      Q+ +T  +  P    W +LG   +V GRV      
Sbjct: 55  DIAGVIAADLRNSGKFNPIDVSRIPQQPVTASEVQPAL--WTALGIDSVVVGRVQPSADG 112

Query: 123 RLRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFV 180
           +  V ++L DV      ++ +  F  P+ W R  AHT SD++++ +TG +G F +RI +V
Sbjct: 113 QYLVSYQLVDVAGSPGAVLSQSEFKVPSKWLRYSAHTASDEVFEKLTGIRGAFRTRIAYV 172

Query: 181 SESVVS--GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDIL 237
              VV+  G     L V D DG N   +  S  Q L  P +SP+  K+AY T++  +  L
Sbjct: 173 ---VVTNGGAYPYELRVSDYDGFNQDRVYRS-SQPLMSPAWSPDGAKLAYVTFESGQSAL 228

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V  + T   R   +I +F     AP FS +G +   ++ K  ++++Y +DL S    ++
Sbjct: 229 VVQTLATGEIR---QIASFPRHNGAPSFSPDGSKLAFALSKSGSLNLYVMDLASGNMTQV 285

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN    N   ++ PD   +V+ SD+ G+ Q+Y +  NG   +RI+ + + +  +P  SP 
Sbjct: 286 TNGRSNNTEPNWMPDGQTLVYTSDQGGRPQIYKVNINGGTPERITWEGKQNQ-NPAVSPD 344

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  +        +  I     + +  + L +    + P+ +P+G  +I+S  +   T  +
Sbjct: 345 GSFLVMVSSESGRQHIAKQDLETNSVQYLTDTFLDETPSIAPNGTMVIYSSTQGLGTILQ 404

Query: 418 LYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           L S D  GR    L  T      P W  FM
Sbjct: 405 LVSTD--GRFKARLPATDGQVKSPAWSPFM 432


>gi|153000267|ref|YP_001365948.1| translocation protein TolB [Shewanella baltica OS185]
 gi|166988082|sp|A6WM46|TOLB_SHEB8 RecName: Full=Protein tolB; Flags: Precursor
 gi|151364885|gb|ABS07885.1| Tol-Pal system beta propeller repeat TolB [Shewanella baltica
           OS185]
          Length = 442

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 195/400 (48%), Gaps = 29/400 (7%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ--DWNSLGAQVLVTGRVIKEGKD 122
           +++VV  DL RS  F  + +    Q+  N  ++ +FQ   W+S+GA+ LV G V   G D
Sbjct: 54  IADVVMSDLVRSGTFKPLDELGLPQR--NIGTVAQFQANSWSSVGAEALVLGTVKPYGTD 111

Query: 123 RLRVEFRLWD-VKDRKQII------------GKKFFSSPASWRKIAHTISDDIYQSITGE 169
           +  V F L D VK + Q +             ++   S A +R+  H ISD +Y+ +TG 
Sbjct: 112 QYLVSFDLIDLVKAQNQALKGPVSATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGI 171

Query: 170 KGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           +G F +RI +V   VV+   K    L V D DG N + L  S +  L  P +SP+ +++A
Sbjct: 172 RGAFLTRISYV---VVNHTQKAPYQLMVADYDGVNEQMLLRSPEP-LMSPTWSPDGRRLA 227

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y +++++    +++ D    +   ++ +F  +  AP FS +GK   I++ KD   +IY +
Sbjct: 228 YVSFENKKA-EIFVQDL-YTQVRTKVSSFPGINGAPAFSPDGKSLAITLSKDGQPEIYII 285

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D+ + A +R+TN   I+   S+ PD   ++F S+R G+ Q+Y ++ +     R + + E 
Sbjct: 286 DIATKAIKRITNHYAIDTEPSWYPDGKSLIFTSERGGRPQIYRVELSSGKVSRETFEGEW 345

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +    + +P G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+ 
Sbjct: 346 NLGGSI-TPDGRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYG 404

Query: 408 RKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
               G     L ++  +GR    L         P W  F+
Sbjct: 405 TTYQGK--QVLAAVSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|187922764|ref|YP_001894406.1| translocation protein TolB [Burkholderia phytofirmans PsJN]
 gi|226705872|sp|B2T077|TOLB_BURPP RecName: Full=Protein tolB; Flags: Precursor
 gi|187713958|gb|ACD15182.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           phytofirmans PsJN]
          Length = 430

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/443 (23%), Positives = 206/443 (46%), Gaps = 19/443 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L ++  +   L+ +GG    + HA + V       +   IA   F +      +VS
Sbjct: 3   LMTKLGLRTLVASCLIAVGG----AAHAQLNVLVTGVGSTQFPIATANFANEANSPQQVS 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V +DLQRS  F  I  D+    +   DS+     W + GA   V+G V +    +  V
Sbjct: 59  TIVRQDLQRSGKFTNI--DAGSTPVAETDSV-DLGSWKAKGANAFVSGSVNRLPNGQYEV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F+L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V ++   
Sbjct: 116 RFKLYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRGVFATRLSYVIKTGG- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG +  ++  S  + +  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQDA-HIALSSPEPIISPAWSPDGTKVAYVSFEKKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G+   +++ +     I++V+   +   RLT    I+  
Sbjct: 230 GRR-VVVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFT 364
             +SPD   I F SDR G+ Q+Y M + G +     +      ++  P  SP G  +A+ 
Sbjct: 289 PCFSPDGQSIYFTSDRGGQPQIYKMSAQGENAGAAQRVTFTGSYNTSPRVSPDGKQLAYI 348

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              G  F + +    G+    L + ++ ++P+++ +G+ ++++ + +G     L ++  +
Sbjct: 349 SRVGGGFKLYIQDLQGNTATGLTDTTHDESPSFAANGQYILYATQVNGR--GVLAAVSTD 406

Query: 425 GRNETLINTPAYA-SDPQWVGFM 446
           GR   +++    +  +P W  FM
Sbjct: 407 GRTRQVLSVQGGSVREPSWGPFM 429


>gi|83720845|ref|YP_441919.1| translocation protein TolB [Burkholderia thailandensis E264]
 gi|83654670|gb|ABC38733.1| tolB protein [Burkholderia thailandensis E264]
          Length = 463

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 195/444 (43%), Gaps = 18/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 33  LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 88

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  +  D+    +    S+  F  W + GA   V G V +E   + +V
Sbjct: 89  SIVRADLARSGKFTNV--DAGGTPVPETASV-DFGAWKAKGANAFVAGSVSREPNGQYKV 145

Query: 127 EFRLWDVKDRKQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S      RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 146 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRT- 204

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
              + K  L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 205 -GNVYK--LLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 259

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV    +   RLT +  I+
Sbjct: 260 PTGRR-YVISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGSGLHRLTRSSSID 318

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIA 362
               YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A
Sbjct: 319 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAGGESAGAAQRVTFTGSYNTSPRISPDGKLLA 378

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       D
Sbjct: 379 YISRTGGGFKLYVQDLQTGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPSD 438

Query: 423 LNGRNETLINTPAYASDPQWVGFM 446
            +   + L        +P W  FM
Sbjct: 439 GSAPPQILSVQGGAIREPSWGPFM 462


>gi|54309711|ref|YP_130731.1| translocation protein TolB [Photobacterium profundum SS9]
 gi|67461961|sp|Q6LP47|TOLB_PHOPR RecName: Full=Protein tolB; Flags: Precursor
 gi|46914149|emb|CAG20929.1| putative TolB protein [Photobacterium profundum SS9]
          Length = 449

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 210/464 (45%), Gaps = 53/464 (11%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           + LC+ L+         +   +    +SA   P+ I    +    +L   +S V++ DLQ
Sbjct: 7   MGLCIALLSFSQIAQAELELVITEGIDSAR--PIGIIPFTWEGEGKLPTDISSVIASDLQ 64

Query: 75  RSDVFNLISQDSFKQKITNPDSIPR--FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           RS  F+ I+     Q    PDS  +  ++ W ++G   LVTG+V K  +    V ++L D
Sbjct: 65  RSGKFSPIATSKMPQ---TPDSEEQIDYRAWTAMGVDALVTGKVTKNAEGNYVVNYQLVD 121

Query: 133 V---------------------KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           V                     KD   ++  +        R+ AH ISD +Y+++TGE+G
Sbjct: 122 VVRGQLTSGESRGLANGELVLTKDH-LLVNNRAIVKETRLRQYAHRISDVVYEALTGEQG 180

Query: 172 DFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            F +RI +V   V+    K+   L V D DG N R +  SR Q L  P +SP+  K+AY 
Sbjct: 181 AFLTRIAYV---VIDDKSKHPYQLRVADYDGFNERLVLKSR-QPLMSPAWSPDGSKLAYV 236

Query: 230 TYDDEDILRVYLMD----TR--IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +++++   ++Y+MD    TR  +   P+  G       +PRFS +GK+  + + K  ++ 
Sbjct: 237 SFENQQA-QIYIMDIYKGTRELVTSYPRHNG-------SPRFSPDGKKLALVLSKTGSLQ 288

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           IY  DL++    ++T+    N  A + PD   ++F SDR G+ Q+Y +    +  KR++ 
Sbjct: 289 IYIKDLKTKKLTQITSGRANNTEAFWDPDGKSLIFTSDRGGQPQIYRVNLADNSTKRLTW 348

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
               +    + +P G  +     S   F I          ++L +    ++P+ +P+G  
Sbjct: 349 QGSQNLGGQL-TPDGRYLVMVNRSDTGFNIAKQDLKTGAVQILTKTFLDESPSIAPNGGM 407

Query: 404 LIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           +I+S   +      L SID  GR    L  T      P W  F+
Sbjct: 408 VIYSSVNNKSNELSLVSID--GRFKARLPTTNGRVRAPSWGPFL 449


>gi|76811659|ref|YP_334628.1| translocation protein TolB [Burkholderia pseudomallei 1710b]
 gi|242315897|ref|ZP_04814913.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei 1106b]
 gi|76581112|gb|ABA50587.1| tolB protein [Burkholderia pseudomallei 1710b]
 gi|242139136|gb|EES25538.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei 1106b]
          Length = 463

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 195/444 (43%), Gaps = 18/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 33  LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 88

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F+ +  D+    +    S+  F  W + GA   V G V +E   + +V
Sbjct: 89  SVVRGDLARSGKFSNV--DAGSTPVPETASV-DFGAWKAKGANAFVAGSVNREPNGQYKV 145

Query: 127 EFRLWDVKDRKQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S      RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 146 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRT- 204

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
              + K  L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 205 -GNVYK--LLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 259

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV        RLT +  I+
Sbjct: 260 PTGRR-YVISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSID 318

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIA 362
               YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A
Sbjct: 319 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYNTSPRVSPDGKLLA 378

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       D
Sbjct: 379 YISRTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPSD 438

Query: 423 LNGRNETLINTPAYASDPQWVGFM 446
            +   + L        +P W  FM
Sbjct: 439 GSAPPQILSVQGGAIREPSWGPFM 462


>gi|167837694|ref|ZP_02464577.1| translocation protein TolB [Burkholderia thailandensis MSMB43]
          Length = 433

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 195/444 (43%), Gaps = 18/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F+ +  D+    +    S+  F  W + GA   V G V +E   + +V
Sbjct: 59  SVVRADLARSGKFSNV--DAGSTPVPETASV-DFGAWKAKGANAFVAGSVNREPNGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S      RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 116 NFILYDTIKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRT- 174

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
              + K  L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 175 -GNVYK--LLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 229

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV        RLT +  I+
Sbjct: 230 PTGRR-YVISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSID 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIA 362
               YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A
Sbjct: 289 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYNTSPRISPDGKLLA 348

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       D
Sbjct: 349 YISRTGGGFKLYVQDLQTGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPSD 408

Query: 423 LNGRNETLINTPAYASDPQWVGFM 446
            +   + L        +P W  FM
Sbjct: 409 GSAPPQILSVQGGAIREPSWGPFM 432


>gi|160874900|ref|YP_001554216.1| translocation protein TolB [Shewanella baltica OS195]
 gi|189035987|sp|A9KY50|TOLB_SHEB9 RecName: Full=Protein tolB; Flags: Precursor
 gi|160860422|gb|ABX48956.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           baltica OS195]
 gi|315267137|gb|ADT93990.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           baltica OS678]
          Length = 442

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 199/402 (49%), Gaps = 33/402 (8%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ--DWNSLGAQVLVTGRVIKEGKD 122
           +++VV  DL RS  F  + +    Q+  N  ++ +FQ   W+S+GA+ LV G V   G D
Sbjct: 54  IADVVMSDLVRSGTFKPLDELGLPQR--NIGTVAQFQANSWSSVGAEALVLGTVKPYGTD 111

Query: 123 RLRVEFRLWD-VKDRKQII------------GKKFFSSPASWRKIAHTISDDIYQSITGE 169
           +  V F L D VK + Q +             ++   S A +R+  H ISD +Y+ +TG 
Sbjct: 112 QYLVSFDLIDLVKAQNQALKGPVSATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGI 171

Query: 170 KGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           +G F +RI +V   VV+   K    L V D DG N + L  S +  L  P +SP+ +++A
Sbjct: 172 RGAFLTRISYV---VVNHTQKAPYQLMVADYDGVNEQMLLRSPEP-LMSPTWSPDGRRLA 227

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y +++++    +++ D    +   ++ +F  +  AP FS +GK   I++ KD   +IY +
Sbjct: 228 YVSFENKKA-EIFVQDL-YTQVRTKVSSFPGINGAPAFSPDGKSLAITLSKDGQPEIYII 285

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D+ + A +R+TN   I+   S+ PD   ++F S+R G+ Q+Y ++ +     R + + E 
Sbjct: 286 DIATKAIKRITNHYAIDTEPSWYPDGKSLIFTSERGGRPQIYRVELSSGKVSRETFEGEW 345

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +    + +P G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+ 
Sbjct: 346 NLGGSI-TPDGRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYG 404

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFM 446
               G     L ++  +GR +  +  PA   +   P W  F+
Sbjct: 405 TTYQGK--QVLAAVSTDGRFKARL--PAGQGEVKSPSWSPFL 442


>gi|270156706|ref|ZP_06185363.1| Tol-Pal system beta propeller repeat protein TolB [Legionella
           longbeachae D-4968]
 gi|289164847|ref|YP_003454985.1| TolB protein [Legionella longbeachae NSW150]
 gi|269988731|gb|EEZ94985.1| Tol-Pal system beta propeller repeat protein TolB [Legionella
           longbeachae D-4968]
 gi|288858020|emb|CBJ11880.1| TolB protein [Legionella longbeachae NSW150]
          Length = 419

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 202/445 (45%), Gaps = 37/445 (8%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +N  I L LLL      F   + A     T   N S + IA   F   +    ++ +V+ 
Sbjct: 2   INRIIKLFLLL------FMQQVFALDLELTQGVN-SALPIAINSF-GANGTAQEIGQVIE 53

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL  S  F ++S          P+          LGA  +VTGRV + G +R  V F L
Sbjct: 54  NDLNLSGQFRIVSGPQ------GPNGQSSVNTLRQLGADSVVTGRVTQVG-NRYEVSFTL 106

Query: 131 WD-VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            D V     ++ K +  S    R +AH ISD++YQ +TGE+G F++RI ++S      I 
Sbjct: 107 TDAVAKGATLLTKTYQISANQIRPLAHHISDEVYQKLTGERGVFSTRIAYISVQRTPKIT 166

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + SL V D DG N + L  S D I+  P +SP+ + ++Y +++ +   +  +    ++  
Sbjct: 167 RYSLEVADADGYNPQSLLVSGDPIM-SPAWSPDGKSISYVSFEKK---KAQIFTVSVETG 222

Query: 250 PKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            +R I +F  +  AP +S +G +  + + K     IYSVD+ S   ++LT    I+    
Sbjct: 223 QRRLITSFPGINGAPAWSPDGNQLAVVLSKSGTPKIYSVDIHSGTMKQLTFGDAIDTEPR 282

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGDLIAFT 364
           Y+PD   I+F S R G  Q+Y +     +  R++     +  ASY     +P    I   
Sbjct: 283 YAPDGKSILFTSGRGGSPQIYRLSLATGEVARVTFEGNYNARASY-----TPDMKNIVML 337

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                +F IG+    G     L      ++P+ +P+GR ++++     D G  L  + L+
Sbjct: 338 HRDDRQFNIGLQSAAGGPILSLTSSGRDESPSVAPNGRLVLYATHNQ-DKGV-LGIVSLD 395

Query: 425 GRNETLINTPAYASD---PQWVGFM 446
           GR    +  PA   D   P W  ++
Sbjct: 396 GR--IRMRLPAREGDVQEPAWSPYL 418


>gi|209517620|ref|ZP_03266458.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           H160]
 gi|209501916|gb|EEA01934.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           H160]
          Length = 430

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 203/440 (46%), Gaps = 19/440 (4%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           +L ++  +   L+ +GG    + +A + V       +   IA T F +      +VS +V
Sbjct: 6   KLGLRTLVATCLIAVGG----AANAQLNVLVTGVGSTQFPIATTNFANEANSPQQVSTIV 61

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
            +DLQRS  F  I  D+    ++  DS+     W + GA   V G V +    +  V F+
Sbjct: 62  RQDLQRSGKFTNI--DAGSTPVSETDSV-DLGAWKAKGANAFVAGSVNRLPNGQYEVRFK 118

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V ++      
Sbjct: 119 LYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGNRGAFATRLSYVIKTGN---- 174

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K  L + D DG +  ++  S  + +  P +SP+  KVAY +++ +  + VY+ D    R 
Sbjct: 175 KYQLQISDSDGQDA-HIALSSPEPIISPAWSPDGTKVAYVSFEKKKPI-VYIHDLPTGRR 232

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              + + +    AP +S +G+   +++ +     I++V+   +   RLT    I+   +Y
Sbjct: 233 -VVVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTEPTY 291

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS 367
           SPD   I F SDR G  Q+Y M + G       +      ++  P  SP G  +A+    
Sbjct: 292 SPDGQWIYFTSDRGGAPQIYKMPAQGESAGSAQRVTFTGSYNTSPRVSPDGKELAYISRV 351

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G  F + +    G     L + ++ ++P+++ +G+ ++++ + +G     L ++  +GR 
Sbjct: 352 GGAFKLYLQDLQGGSATGLTDTAHDESPSFAANGQYILYATQVNGR--GVLAAVSTDGRT 409

Query: 428 ETLINT-PAYASDPQWVGFM 446
             +++       +P W  FM
Sbjct: 410 RQVLSVQGGNVREPSWGPFM 429


>gi|226194238|ref|ZP_03789837.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei Pakistan 9]
 gi|225933703|gb|EEH29691.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei Pakistan 9]
          Length = 421

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 191/434 (44%), Gaps = 18/434 (4%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           +   L+  GG    + HA V V       +   IA   FV+   L  +V+ VV  DL RS
Sbjct: 1   MASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVTSVVRGDLARS 56

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F+ +  D+    +    S+  F  W + GA   V G V +E   + +V F L+D   +
Sbjct: 57  GKFSNV--DAGSTPVPETASV-DFGAWKAKGANAFVAGSVNREPNGQYKVNFILYDTVKQ 113

Query: 137 KQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           + + G    +S      RK  H I+D IYQ + G +G FN+R+ +V  +    + K  L 
Sbjct: 114 QSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRT--GNVYK--LL 169

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D    R    I 
Sbjct: 170 ISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDLPTGRR-YVIS 226

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           N +    AP +S +G+   +++       IYSV        RLT +  I+    YSPD  
Sbjct: 227 NQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSIDTEPFYSPDGK 286

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFA 372
            I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+   +G  F 
Sbjct: 287 WIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYISRTGGGFK 346

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + V          +   +  ++P+++ +G+ ++++ +  G +       D +   + L  
Sbjct: 347 LYVQDLQSGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPSDGSAPPQILSV 406

Query: 433 TPAYASDPQWVGFM 446
                 +P W  FM
Sbjct: 407 QGGAIREPSWGPFM 420


>gi|167563919|ref|ZP_02356835.1| translocation protein TolB [Burkholderia oklahomensis EO147]
 gi|167571054|ref|ZP_02363928.1| translocation protein TolB [Burkholderia oklahomensis C6786]
          Length = 433

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 195/444 (43%), Gaps = 18/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F+ +  D+    +    S+  F  W + GA   V G V +E   + +V
Sbjct: 59  SVVRGDLARSGKFSNV--DAGSTPVPETASV-DFGAWKAKGANAFVAGSVSREPNGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S      RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 116 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRT- 174

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
              + K  L + D DG N      S++ I+  P +SP+  KVAY +++ +  + VY+ D 
Sbjct: 175 -GNVYK--LLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELKKPV-VYIHDL 229

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV        RLT +  I+
Sbjct: 230 PTGRR-YVISNQKGNNSAPAWSPDGQTLSVALSLTGNTQIYSVSSTGTGLRRLTRSSSID 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIA 362
               YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A
Sbjct: 289 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYNTSPRISPDGKLLA 348

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   +G  F + V          +   +  ++P+++ +G+ ++++ +  G         D
Sbjct: 349 YISRTGGGFKLYVQDLQTGAANAVTNTTRDESPSFAANGQYILYATQSGGRGVLAAVPSD 408

Query: 423 LNGRNETLINTPAYASDPQWVGFM 446
            +   + L        +P W  FM
Sbjct: 409 GSAPPQILSVQGGAIREPSWGPFM 432


>gi|304409844|ref|ZP_07391464.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           baltica OS183]
 gi|307304200|ref|ZP_07583953.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           baltica BA175]
 gi|304352362|gb|EFM16760.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           baltica OS183]
 gi|306913098|gb|EFN43521.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           baltica BA175]
          Length = 442

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 195/400 (48%), Gaps = 29/400 (7%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ--DWNSLGAQVLVTGRVIKEGKD 122
           +++VV  DL RS  F  + +    Q+  N  ++ +FQ   W+S+GA+ LV G V   G D
Sbjct: 54  IADVVMSDLVRSGTFKPLDELGLPQR--NIGTVAQFQANSWSSVGAEALVLGTVKPYGTD 111

Query: 123 RLRVEFRLWD-VKDRKQII------------GKKFFSSPASWRKIAHTISDDIYQSITGE 169
           +  V F L D VK + Q +             ++   S A +R+  H ISD +Y+ +TG 
Sbjct: 112 QYLVSFDLIDLVKAQNQALKGPVSATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGI 171

Query: 170 KGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           +G F +RI +V   VV+   K    L V D DG N + L  S +  L  P +SP+ +++A
Sbjct: 172 RGAFLTRISYV---VVNHTQKAPYQLMVADYDGVNEQMLLRSPEP-LMSPTWSPDGRRLA 227

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y +++++    +++ D    +   ++ +F  +  AP FS +GK   +++ KD   +IY +
Sbjct: 228 YVSFENKKA-EIFVQDL-YTQVRTKVSSFPGINGAPAFSPDGKSLAVTLSKDGQPEIYII 285

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D+ + A +R+TN   I+   S+ PD   ++F S+R G+ Q+Y ++ +     R + + E 
Sbjct: 286 DIATKAIKRITNHYAIDTEPSWYPDGKSLIFTSERGGRPQIYRVELSSGKVSRETFEGEW 345

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +    + +P G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+ 
Sbjct: 346 NLGGSI-TPDGRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYG 404

Query: 408 RKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
               G     L ++  +GR    L         P W  F+
Sbjct: 405 TTYQGK--QVLAAVSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|254180824|ref|ZP_04887422.1| putative TolB protein [Burkholderia pseudomallei 1655]
 gi|184211363|gb|EDU08406.1| putative TolB protein [Burkholderia pseudomallei 1655]
          Length = 430

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 194/441 (43%), Gaps = 18/441 (4%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           +L  +  +   L+  GG    + HA V V       +   IA   F++   L  +V+ VV
Sbjct: 3   KLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFLNEASLPQQVTSVV 58

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
             DL RS  F+ +  D+    +    S+  F  W + GA   V G V +E   + +V F 
Sbjct: 59  RGDLARSGKFSNV--DAGSTPVPETASV-DFGAWKAKGANAFVAGSVNREPNGQYKVNFI 115

Query: 130 LWDVKDRKQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           L+D   ++ + G    +S      RK  H I+D IYQ + G +G FN+R+ +V  +    
Sbjct: 116 LYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRT--GN 173

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
           + K  L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D    
Sbjct: 174 VYK--LLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDLPTG 229

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R    I N +    AP +S +G+   +++       IYSV        RLT +  I+   
Sbjct: 230 RR-YVISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSIDTEP 288

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTK 365
            YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+  
Sbjct: 289 FYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYIS 348

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       D + 
Sbjct: 349 RTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPSDGSA 408

Query: 426 RNETLINTPAYASDPQWVGFM 446
             + L        +P W  FM
Sbjct: 409 PPQILSVQGGAIREPSWGPFM 429


>gi|118574590|sp|Q3B584|TOLB_PELLD RecName: Full=Protein tolB; Flags: Precursor
          Length = 436

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 212/449 (47%), Gaps = 38/449 (8%)

Query: 12  NMKINLCLLLVLIGGF-FPTSIHAFVK--VATNSANYSPVSIAFTKFVSIDELGGKVS-- 66
           ++++   LLL  I  F FP S  A     +A        +++   K ++    GGK S  
Sbjct: 4   SIRLTAALLLAFIACFSFPLSAMALEGEYIAIRKEGAGRIALVLGKPLA---EGGKASAW 60

Query: 67  -----EVVSKDLQRSDVFNLISQ--DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
                  + + L  + +FN+I    + F+   +   ++  F   NS+GA++   G +  E
Sbjct: 61  SAELDREIREGLAFTGIFNMIPPPLNLFETGGSGKRTL-NFGALNSIGAEIFAGGSLASE 119

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
              R+++   +++    K I+ K +   P   R IAH    D+ + +TG +  F S I+F
Sbjct: 120 -AGRVKLSMAVYETFGAKPILSKTYSGRPDELRTIAHAFCADLVKLLTGRRSVFGSNIVF 178

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILR 238
           VS    SG  +   C    DG ++  LT SR  I   P  SP+  ++A+  Y      L+
Sbjct: 179 VSNR--SGFKEIYSCAF--DGGSLSQLTRSRS-ISLTPALSPDGTRLAFTDYTSGRPGLK 233

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-LISVQKDEAMDIYSVDLQSNATERL 297
           +  M  R   A ++ G    + + P + SNG+ A  +S + D+  DIY V      + ++
Sbjct: 234 IMNMADRRISAVRQSG----VSIDPGWRSNGEVATTLSFEGDQ--DIYLVRPDGTLSRKV 287

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T++  I++S S+SPD +++ F S R G  Q++++       +R++ +   +   P WSP 
Sbjct: 288 TSSRGIDLSPSFSPDGTKMAFVSARFGNPQVFILDLGTGQTRRLTYNGNYNT-QPSWSPG 346

Query: 358 GDLIAFTKF--SGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           GD IA+T    +GE   I  ++ DGS   RL       ++P+WSP G  ++F+  + G  
Sbjct: 347 GDKIAYTTMEKNGE-INIFTIRPDGSGATRLTSGARENESPSWSPGGDMIVFTSGRQGQ- 404

Query: 415 GSKLYSIDLNGRNE-TLINTPAYASDPQW 442
             KLY ++ NG N+  L+        P W
Sbjct: 405 -KKLYVMNANGDNQRRLLQMEGEQMQPSW 432



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 11/161 (6%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GN 255
           DG   R +T SR  I   P FSP+  K+A+ +    +  +V+++D    +  +R+   GN
Sbjct: 280 DGTLSRKVTSSRG-IDLSPSFSPDGTKMAFVSARFGNP-QVFILDLGTGQT-RRLTYNGN 336

Query: 256 FRSMILAPRFSSNG-KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           + +    P +S  G K A  +++K+  ++I+++    +   RLT+    N S S+SP   
Sbjct: 337 YNTQ---PSWSPGGDKIAYTTMEKNGEINIFTIRPDGSGATRLTSGARENESPSWSPGGD 393

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            IVF S R+G+++LYVM +NG +Q+R+ Q  E     P WS
Sbjct: 394 MIVFTSGRQGQKKLYVMNANGDNQRRLLQ-MEGEQMQPSWS 433


>gi|170727076|ref|YP_001761102.1| translocation protein TolB [Shewanella woodyi ATCC 51908]
 gi|226705894|sp|B1KIF6|TOLB_SHEWM RecName: Full=Protein tolB; Flags: Precursor
 gi|169812423|gb|ACA87007.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           woodyi ATCC 51908]
          Length = 442

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 197/405 (48%), Gaps = 37/405 (9%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF--QDWNSLGAQVLVTGRVIKEGK 121
           ++S+VV  DL RS  FN I +    Q+  N   + +F  ++W+++ A+ +V G V   G 
Sbjct: 53  QISDVVMSDLARSGTFNPIDELGLPQR--NIAKVSQFVAKEWSNVAAEAVVMGSVKPMGP 110

Query: 122 DRLRVEFRLWD-VKDRKQ------------IIGKKFFSSPASWRKIAHTISDDIYQSITG 168
           D+  V F L D VK + Q            I   +   S   +R+  H ISD +Y+ +TG
Sbjct: 111 DQFLVNFELVDLVKAQMQAGNGPQSSSEYLIDSSEVVISAEQFRQYGHRISDIVYEKLTG 170

Query: 169 EKGDFNSRILFVSESVVSGIIKNS------LCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            +G F +RI +V       ++K+       L + D DG N + L  S +  L  P +SP+
Sbjct: 171 IRGAFLTRIAYV-------VVKHGEKSPYHLMISDYDGHNEKMLLRSPEP-LMSPSWSPD 222

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             K+AY +++++    V++ +    +A  +I ++  +  AP FS +GK+  +++ +D   
Sbjct: 223 GSKLAYVSFENKKA-EVFVQNI-YTQARAKITSYDGINGAPVFSPDGKKLALTLSRDGQP 280

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +IY VD+ + A +R+TN   I+  AS+ PD   ++F S+R G+ Q+Y +       +R++
Sbjct: 281 EIYVVDIDTKALKRVTNHYAIDTEASWFPDGKSLIFTSERGGRPQIYKVTLASGKVQRMT 340

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            + E +    + SP G  + F   +  KF I  M  +    ++L      ++P+ +P+G 
Sbjct: 341 FEGEWNLGGSI-SPDGRSMIFVNRTNGKFNIARMDLETRFVQVLTSTRLDESPSVAPNGT 399

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
            +I+     G     L ++  +GR    L         P W  F+
Sbjct: 400 MVIYGTTYQGK--QVLAAVSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|78186497|ref|YP_374540.1| TolB protein, putative [Chlorobium luteolum DSM 273]
 gi|78166399|gb|ABB23497.1| TolB protein, putative [Chlorobium luteolum DSM 273]
          Length = 449

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 212/449 (47%), Gaps = 38/449 (8%)

Query: 12  NMKINLCLLLVLIGGF-FPTSIHAFVK--VATNSANYSPVSIAFTKFVSIDELGGKVS-- 66
           ++++   LLL  I  F FP S  A     +A        +++   K ++    GGK S  
Sbjct: 17  SIRLTAALLLAFIACFSFPLSAMALEGEYIAIRKEGAGRIALVLGKPLA---EGGKASAW 73

Query: 67  -----EVVSKDLQRSDVFNLISQ--DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
                  + + L  + +FN+I    + F+   +   ++  F   NS+GA++   G +  E
Sbjct: 74  SAELDREIREGLAFTGIFNMIPPPLNLFETGGSGKRTL-NFGALNSIGAEIFAGGSLASE 132

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
              R+++   +++    K I+ K +   P   R IAH    D+ + +TG +  F S I+F
Sbjct: 133 -AGRVKLSMAVYETFGAKPILSKTYSGRPDELRTIAHAFCADLVKLLTGRRSVFGSNIVF 191

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILR 238
           VS    SG  +   C    DG ++  LT SR  I   P  SP+  ++A+  Y      L+
Sbjct: 192 VSNR--SGFKEIYSCAF--DGGSLSQLTRSRS-ISLTPALSPDGTRLAFTDYTSGRPGLK 246

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-LISVQKDEAMDIYSVDLQSNATERL 297
           +  M  R   A ++ G    + + P + SNG+ A  +S + D+  DIY V      + ++
Sbjct: 247 IMNMADRRISAVRQSG----VSIDPGWRSNGEVATTLSFEGDQ--DIYLVRPDGTLSRKV 300

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T++  I++S S+SPD +++ F S R G  Q++++       +R++ +   +   P WSP 
Sbjct: 301 TSSRGIDLSPSFSPDGTKMAFVSARFGNPQVFILDLGTGQTRRLTYNGNYNT-QPSWSPG 359

Query: 358 GDLIAFTKF--SGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           GD IA+T    +GE   I  ++ DGS   RL       ++P+WSP G  ++F+  + G  
Sbjct: 360 GDKIAYTTMEKNGE-INIFTIRPDGSGATRLTSGARENESPSWSPGGDMIVFTSGRQGQ- 417

Query: 415 GSKLYSIDLNGRNE-TLINTPAYASDPQW 442
             KLY ++ NG N+  L+        P W
Sbjct: 418 -KKLYVMNANGDNQRRLLQMEGEQMQPSW 445



 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 11/161 (6%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GN 255
           DG   R +T SR  I   P FSP+  K+A+ +    +  +V+++D    +  +R+   GN
Sbjct: 293 DGTLSRKVTSSRG-IDLSPSFSPDGTKMAFVSARFGNP-QVFILDLGTGQT-RRLTYNGN 349

Query: 256 FRSMILAPRFSSNG-KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           + +    P +S  G K A  +++K+  ++I+++    +   RLT+    N S S+SP   
Sbjct: 350 YNTQ---PSWSPGGDKIAYTTMEKNGEINIFTIRPDGSGATRLTSGARENESPSWSPGGD 406

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            IVF S R+G+++LYVM +NG +Q+R+ Q  E     P WS
Sbjct: 407 MIVFTSGRQGQKKLYVMNANGDNQRRLLQ-MEGEQMQPSWS 446


>gi|294140561|ref|YP_003556539.1| tolB protein [Shewanella violacea DSS12]
 gi|293327030|dbj|BAJ01761.1| tolB protein [Shewanella violacea DSS12]
          Length = 442

 Score =  133 bits (335), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 105/405 (25%), Positives = 197/405 (48%), Gaps = 37/405 (9%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF--QDWNSLGAQVLVTGRVIKEGK 121
           ++S+VV  DL RS  F  +      Q+  N  ++ +F  +DW+S+ A+ ++ G V   G 
Sbjct: 53  QISDVVMSDLTRSGTFKPLDDLGLPQR--NISNVSQFVAKDWSSIEAEAVIMGSVKPRGN 110

Query: 122 DRLRVEFRLWDVK------------DRKQII-GKKFFSSPASWRKIAHTISDDIYQSITG 168
           D+  V F L D+              R+ +I  ++   + A +R   H ISD +Y+ +TG
Sbjct: 111 DQYLVTFDLVDLAKAQMQQGAGPRSSREYLIDSRETVITAAQFRHYGHRISDLVYEKLTG 170

Query: 169 EKGDFNSRILFVSESVVSGIIKNS------LCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            +G F + I +V       ++K+       L + D DG N + L  S +  L  P +SP+
Sbjct: 171 IRGAFLTHIAYV-------MVKHGEKSPYQLMISDYDGHNEQMLLRSAEP-LMSPSWSPD 222

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             K+AY +++++    +++ D    ++  ++ +F+ +  AP FS +GK+  +++ KD   
Sbjct: 223 GSKLAYVSFENKKS-EIFIQDI-YTQSRHKVTSFKGINGAPVFSPDGKKLALTLSKDGQP 280

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +IY +D+ + A +R+TN   I+  AS+ PD   ++F S+R G+ Q+Y         +R++
Sbjct: 281 EIYVIDIATKALKRVTNHYAIDTEASWFPDGKSLIFTSERGGRPQIYKATLASGKVQRLT 340

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            + E +    V +P G  + F   +  KF I  M  +    ++L      ++P+ +P+G 
Sbjct: 341 YEGEWNLGGSV-APDGRSMIFVNRTNGKFNIARMDLETHFMQVLSSTRLDESPSVAPNGT 399

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
            +I+    DG     L ++  +GR    L         P W  F+
Sbjct: 400 MVIYGTTHDGK--QVLGAVSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|315126276|ref|YP_004068279.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Pseudoalteromonas sp.
           SM9913]
 gi|315014790|gb|ADT68128.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Pseudoalteromonas sp.
           SM9913]
          Length = 452

 Score =  133 bits (334), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 116/460 (25%), Positives = 208/460 (45%), Gaps = 88/460 (19%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           KI +  L++++G  F    HA +++          P++I   K+  I  +  ++S+V++ 
Sbjct: 4   KIKIACLVLILG--FQGVAHAALEIVITEGIDGARPIAIVPFKYQGIGPIPEQLSDVIAA 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  F  +S     Q+  + D    +  W + G + ++ G V ++   R  V + L 
Sbjct: 62  DLMRSGKFKPVSVSQMPQQ-PHKDGDIDYGAWVNKGVEAVLVGEVEQQTNGRYLVRYELV 120

Query: 132 DVKDRKQIIG---------------------KKFFSSPASWRKIAHTISDDIYQSITGEK 170
           DV  R QI G                     ++       +R+ +H ISD IY+ +TGEK
Sbjct: 121 DVI-RGQITGGETQMMSNGKLVQSQDHILEARQSVIGETGFRRYSHRISDVIYEKLTGEK 179

Query: 171 GDFNSRILFVSESVVSGIIKNS------LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           G F ++I +V       I++++      L V D DG N + L  S++  L  P +SP+  
Sbjct: 180 GAFLTKIAYV-------IVRDTEEKPYQLVVADYDGFNEQVLLRSKEP-LMSPVWSPDGT 231

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--AM 282
           K+AY T+++    ++Y+ D    +  + I +++ +  AP+FS +GK+ L+ + KD+  A 
Sbjct: 232 KLAYVTFENRQS-QIYIQDIYTGKR-ELITSYKGINGAPQFSPDGKKLLLVLSKDKTGAT 289

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY------------- 329
           ++Y +DL +    RLT    I+   S+ P+   IVF S+R G  Q+Y             
Sbjct: 290 EVYLLDLLTRKETRLTRHRSIDTEPSWYPNGEDIVFTSERGGNAQIYKLNLKTGRTQRLT 349

Query: 330 ------------------VMQSNGSDQKRISQDKEASYF-----------DPVWSPQGDL 360
                             VM +  + Q  +++ + A+              P  +P G +
Sbjct: 350 FDGDMNLAGSISPDGKELVMVNRTNGQYHLAKKELATGAFQVLTRTRLDESPSIAPNGSM 409

Query: 361 IAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           I ++     K  + ++  DG  + RL V D  ++AP WSP
Sbjct: 410 IIYSTLHNNKQVLALVSMDGRFKARLPVLDGQVKAPAWSP 449



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 6/154 (3%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEASYF 350
           + R+++ ++  ++       ++I +   R+ +E   QL V   +G +++ + + KE    
Sbjct: 164 SHRISDVIYEKLTGEKGAFLTKIAYVIVRDTEEKPYQLVVADYDGFNEQVLLRSKEP-LM 222

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRK 409
            PVWSP G  +A+  F   +  I +      +  L+     +  AP +SP G+ L+    
Sbjct: 223 SPVWSPDGTKLAYVTFENRQSQIYIQDIYTGKRELITSYKGINGAPQFSPDGKKLLLVLS 282

Query: 410 KDGDTGSKLYSIDLNGRNET-LINTPAYASDPQW 442
           KD    +++Y +DL  R ET L    +  ++P W
Sbjct: 283 KDKTGATEVYLLDLLTRKETRLTRHRSIDTEPSW 316


>gi|217973704|ref|YP_002358455.1| translocation protein TolB [Shewanella baltica OS223]
 gi|254764842|sp|B8EAK3|TOLB_SHEB2 RecName: Full=Protein tolB; Flags: Precursor
 gi|217498839|gb|ACK47032.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           baltica OS223]
          Length = 442

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 194/400 (48%), Gaps = 29/400 (7%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ--DWNSLGAQVLVTGRVIKEGKD 122
           +++VV  DL RS  F  + +    Q+  N  +  +FQ   W+S+GA+ LV G V   G D
Sbjct: 54  IADVVMSDLVRSGTFKPLDELGLPQR--NIGTAAQFQANSWSSVGAEALVLGTVKPYGTD 111

Query: 123 RLRVEFRLWD-VKDRKQII------------GKKFFSSPASWRKIAHTISDDIYQSITGE 169
           +  V F L D VK + Q +             ++   S A +R+  H ISD +Y+ +TG 
Sbjct: 112 QYLVSFDLIDLVKAQNQALKGPVSATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGI 171

Query: 170 KGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           +G F +RI +V   VV+   K    L V D DG N + L  S +  L  P +SP+ +++A
Sbjct: 172 RGAFLTRISYV---VVNHTQKAPYQLMVADYDGVNEQMLLRSPEP-LMSPTWSPDGRRLA 227

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y +++++    +++ D    +   ++ +F  +  AP FS +GK   I++ KD   +IY +
Sbjct: 228 YVSFENKKA-EIFVQDL-YTQVRTKVSSFPGINGAPAFSPDGKSLAITLSKDGQPEIYII 285

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D+ + A +R+TN   I+   S+ PD   ++F S+R G+ Q+Y ++ +     R + + E 
Sbjct: 286 DIATKAIKRITNHYAIDTEPSWYPDGKSLIFTSERGGRPQIYRVELSSGKVSRETFEGEW 345

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +    + +P G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+ 
Sbjct: 346 NLGGSI-TPDGRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYG 404

Query: 408 RKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
               G     L ++  +GR    L         P W  F+
Sbjct: 405 TTYQGK--QVLAAVSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|212634657|ref|YP_002311182.1| translocation protein TolB [Shewanella piezotolerans WP3]
 gi|226705893|sp|B8CLE4|TOLB_SHEPW RecName: Full=Protein tolB; Flags: Precursor
 gi|212556141|gb|ACJ28595.1| TolB protein [Shewanella piezotolerans WP3]
          Length = 442

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 204/421 (48%), Gaps = 39/421 (9%)

Query: 50  IAFTKFV--SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF--QDWNS 105
           IA   FV      +  ++S+VV  DL RS  F+   + S  Q+  N  ++ +F  + W +
Sbjct: 37  IAVVPFVWQGTGPMPSQISDVVMSDLARSGTFSPSDELSLPQR--NISTLAQFDAKAWMA 94

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWD-VKDRKQ------------IIGKKFFSSPASWR 152
             A+ +V G +   G D+  V F+L D VK + Q            I  ++   S A +R
Sbjct: 95  QPAEAVVMGSIKPYGADKYLVSFQLIDLVKAQLQSGAGPQAANDLVIDSRETVISAAQFR 154

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS------LCVMDRDGANIRYL 206
           +  H ISD +Y+ +TG +G F +RI +V       ++K+       L + D DG N + L
Sbjct: 155 QYGHRISDVVYEKLTGIRGAFLTRIAYV-------VVKHGEKSPYQLMISDYDGYNEQML 207

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S +  L  P +SP+ Q++AY ++++     V++ +    +A K++ +F  +  AP FS
Sbjct: 208 LRSPEP-LMSPSWSPDGQQLAYVSFENRKA-EVFVQNI-YTQARKKVTSFNGINGAPVFS 264

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK+  +++ KD   DIY VD+ ++A +R+TN   I+   S+ PD   ++  S+R G+ 
Sbjct: 265 PDGKKLALTLSKDGQPDIYVVDIATSALKRVTNHYSIDTEPSWFPDGKSLLLTSERGGRP 324

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           QLY +  +     R++ + E +    + +P G  I F   +  KF I  M  +    ++L
Sbjct: 325 QLYRVFLDSGKISRLTFEGEWNLGGSI-APDGRSIVFVNRTNGKFNIARMDLETRFMQVL 383

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
                 ++P+ +P+G  +I+     G     L ++ ++GR    L         P W  F
Sbjct: 384 TSTRLDESPSLAPNGTMVIYGTTYQGK--QVLAAVSMDGRFKARLPVGQGEVKSPSWSPF 441

Query: 446 M 446
           +
Sbjct: 442 L 442


>gi|222873073|gb|EEF10204.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 153/327 (46%), Gaps = 11/327 (3%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
           +V       + + IA   F    +   K+S ++  DL+RS  F  +     +   T   S
Sbjct: 40  RVEVTGVGLTQLPIAIAAFKGEGQAPQKISAIIQADLERSGQFRAVDTAGVQLDET---S 96

Query: 97  IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            P    W    A  L  G + +    R  V FRLWDV   + + G+ F  +    R +AH
Sbjct: 97  RPDVAMWRQKSADSLAVGSITRLADGRYDVRFRLWDVVKGQDLGGQGFAVTTGDLRLVAH 156

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            ISD IY+ +TGEKG F++RI +V+++  +      L V D DG N +    S + I+  
Sbjct: 157 RISDYIYEKLTGEKGVFSTRIAYVTKAGSN----YRLWVADADGENAQSALSSPEPII-S 211

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +SP   ++AY +++    + VY+ D    R  + + NFR    AP +S +G    +++
Sbjct: 212 PAWSPTGTQLAYVSFESRKPV-VYVHDVASGRR-RLVANFRGSNSAPAWSPDGNSLAVTL 269

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D    +Y +  Q     RL  +  I+   ++S D   I F SDR G  Q+Y + ++G 
Sbjct: 270 SRDGGSQLYLISAQGGEPRRLMQSSGIDTEPNFSSDGRSIYFVSDRGGAPQIYKVPASGG 329

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAF 363
             +R++     +   P  SP G  +A+
Sbjct: 330 SAERVTFTGNYN-ISPSVSPDGKWLAY 355



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 11/150 (7%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           IS ++SP  +Q+ + S    K  +YV     S ++R+  +   S   P WSP G+ +A T
Sbjct: 210 ISPAWSPTGTQLAYVSFESRKPVVYV-HDVASGRRRLVANFRGSNSAPAWSPDGNSLAVT 268

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   + ++   G + R L++ S +   P +S  GRS+ F   + G    ++Y +  
Sbjct: 269 LSRDGGSQLYLISAQGGEPRRLMQSSGIDTEPNFSSDGRSIYFVSDRGG--APQIYKVPA 326

Query: 424 NGRNETLIN-------TPAYASDPQWVGFM 446
           +G +   +        +P+ + D +W+ ++
Sbjct: 327 SGGSAERVTFTGNYNISPSVSPDGKWLAYV 356


>gi|126173975|ref|YP_001050124.1| translocation protein TolB [Shewanella baltica OS155]
 gi|166988081|sp|A3D3E2|TOLB_SHEB5 RecName: Full=Protein tolB; Flags: Precursor
 gi|125997180|gb|ABN61255.1| TolB, N-terminal domain protein [Shewanella baltica OS155]
          Length = 442

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 194/400 (48%), Gaps = 29/400 (7%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ--DWNSLGAQVLVTGRVIKEGKD 122
           +++VV  DL RS  F  + +    Q+  N  +  +FQ   W+S+GA+ LV G V   G D
Sbjct: 54  IADVVMSDLVRSGTFKPLDELGLPQR--NIGTAAQFQANSWSSVGAEALVLGTVKPYGTD 111

Query: 123 RLRVEFRLWD-VKDRKQII------------GKKFFSSPASWRKIAHTISDDIYQSITGE 169
           +  V F L D VK + Q +             ++   S A +R+  H ISD +Y+ +TG 
Sbjct: 112 QYLVSFDLIDLVKAQNQALKGPVSATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGI 171

Query: 170 KGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           +G F +RI +V   VV+   K    L V D DG N + L  S +  L  P +SP+ +++A
Sbjct: 172 RGAFLTRISYV---VVNHTQKAPYQLMVADYDGVNEQMLLRSPEP-LMSPTWSPDGRRLA 227

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y +++++    +++ D    +   ++ +F  +  AP FS +GK   I++ KD   +IY +
Sbjct: 228 YVSFENKKA-EIFVQDL-YTQVRTKVSSFPGINGAPAFSPDGKSLAITLSKDGQPEIYII 285

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D+ + A +R+TN   I+   S+ PD   ++F S+R G+ Q+Y ++ +     R + + E 
Sbjct: 286 DIATKAIKRITNHYAIDTEPSWYPDGKSLIFTSERGGRPQIYRVELSSGKVSRETFEGEW 345

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +    + +P G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+ 
Sbjct: 346 NLGGSI-TPDGRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYG 404

Query: 408 RKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
               G     L ++  +GR    L         P W  F+
Sbjct: 405 TTYQGK--QVLAAVSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|330815668|ref|YP_004359373.1| Putative TolB protein [Burkholderia gladioli BSR3]
 gi|327368061|gb|AEA59417.1| Putative TolB protein [Burkholderia gladioli BSR3]
          Length = 433

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 204/447 (45%), Gaps = 24/447 (5%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G    ++ +A V V       +   IA   FV+   L   V+
Sbjct: 3   LMTKLGFRALVASCLIAAG----STANAQVNVLITGVGSTQFPIATANFVNEGGLPQSVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIP-RFQDWNSLGAQVLVTGRVIKEGKDRLR 125
            VV  DL R+  F+ +  D+    I  P++ P  +  W + GA  LV G V ++   +++
Sbjct: 59  AVVRADLARTGKFSNV--DAGSTPI--PETAPVDYGAWKAKGANALVAGTVNRDASGQVK 114

Query: 126 VEFRLWDVKDRKQIIGKKFFSS--PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           V+F L+D   ++ + G    +     S RK  H I+D IYQ + G +G F++R+ +V+ S
Sbjct: 115 VDFMLFDTLKQQSLGGLSLTAGGDAESMRKTGHKIADFIYQKLMGVRGVFSTRLSYVTRS 174

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                 K  L + D DG N      S + I+  P +SP+  KVAY +++    + VY+ D
Sbjct: 175 GG----KYRLLISDSDGENAVPALTSSEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHD 228

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R    I N +    AP +S +G+   +++       IYSV        RLT +  I
Sbjct: 229 LPTGRR-YVISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSATGTGLRRLTQSSSI 287

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLI 361
           +    YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+
Sbjct: 288 DTEPFYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGSAQRVTFTGSYNTSPRVSPDGKLL 347

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A+   +G  F + V          +   ++ ++P+++ +G+ ++++ + +G   S L ++
Sbjct: 348 AYISRTGGGFKLYVQDLQTGAANAVTNTTHDESPSFAANGQYILYATQANGR--SVLAAV 405

Query: 422 DLNGRNETLINTPAYAS--DPQWVGFM 446
             +G +   I      S  +P W  FM
Sbjct: 406 PSDGSSPPQILPVQGGSFREPSWGPFM 432


>gi|194290407|ref|YP_002006314.1| translocation protein tolb [Cupriavidus taiwanensis LMG 19424]
 gi|193224242|emb|CAQ70251.1| colicin transporter component [Cupriavidus taiwanensis LMG 19424]
          Length = 457

 Score =  133 bits (334), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 107/420 (25%), Positives = 198/420 (47%), Gaps = 22/420 (5%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF-NLISQDSFKQKI 91
           HA + V  +    S   +A   F    +    ++ ++  DL RS  F N+    +   + 
Sbjct: 53  HAQLNVEISGVGSSQFPVATANFQGEAQAPQNLTAIIRSDLARSGRFRNVDPGGATVAES 112

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
            N D       W + GA   V G V      +  V FRL+D    + + G  F  + +  
Sbjct: 113 ANVD----LGSWKARGADAFVAGSVTPAAGGKYEVRFRLYDTVKGQSLGGLAFTVNQSQL 168

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R  AH I+D IY+ + GE+G F +R+ +VS+  V G  +  L + D DG N +    S +
Sbjct: 169 RVTAHKIADYIYEKLLGERGVFATRLSYVSK--VGG--RYQLLISDSDGQNAQVALTSNE 224

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I+  P +SP+  +VAY +++ +  + VY+ D    +    + N +    AP +S +G+ 
Sbjct: 225 PII-SPSWSPDGARVAYVSFEAKKPV-VYVHDLASGKR-TLVSNQKGNNSAPSWSPDGRH 281

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +++ +D    +Y V+   +   RL+ +  I+    YSPD   I F SDR G  Q+Y M
Sbjct: 282 LALALSRDGNTQVYQVNADGSGIRRLSRSSAIDTEPQYSPDGKSIYFTSDRGGAPQIYRM 341

Query: 332 QSNGSD---QKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            ++G +    +R++   + SY   P  SP G  +A+   +G  F + +          L 
Sbjct: 342 PASGEEGGGAQRVT--FKGSYNVSPRISPDGKYLAYISRAG-GFKLQLQDLTNGDVTSLT 398

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVGFM 446
           + +N +AP+++ +G+ ++++ +  G   + L ++  +GR   +++  +    +P W  FM
Sbjct: 399 DTANDEAPSFAANGKYILYATRVGGR--AVLAAVSTDGRTRQVLSLQSGDVREPSWGPFM 456


>gi|197284481|ref|YP_002150353.1| translocation protein TolB [Proteus mirabilis HI4320]
 gi|194681968|emb|CAR41400.1| TolB protein [Proteus mirabilis HI4320]
          Length = 432

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 209/450 (46%), Gaps = 27/450 (6%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVA-TNSANYS-PVSIAFTKFVSIDELGG 63
            + + LN+   L +L V       T  +A V++  T   N + P+ +   K+    ++  
Sbjct: 1   MMKQALNVIFGLLILCVT------TLANAEVRIEITQGVNTARPIGVVPFKWEGTGQMPE 54

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQK-ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
            ++ V++ DL+ S  FN I  +   Q+ +T  +  P    W +LG   +V GRV      
Sbjct: 55  DIAGVIAADLRNSGKFNPIDMNRLPQQPVTASEVQPAL--WTALGIDSVVVGRVQPSADG 112

Query: 123 RLRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFV 180
           +  V ++L DV      ++ +  +     W R  AHT SD+I++ +TG +G F +RI +V
Sbjct: 113 QYVVSYQLVDVAGSPGAVLAQSEYKISNKWLRYAAHTASDEIFEKLTGIRGAFRTRIAYV 172

Query: 181 SESVVS--GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDIL 237
              VV+  G     L V D DG N   +  S  Q L  P +SP+  K+AY T++  +  L
Sbjct: 173 ---VVTNGGAYPYELRVSDYDGFNQDRVYRS-SQPLMSPAWSPDGAKLAYVTFESGQSAL 228

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V  + T   R   +I +F     AP FS +G +   ++ K  ++++Y +DL S    ++
Sbjct: 229 VVQTLATGEVR---QIASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMDLASGNMTQV 285

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN    N   ++ PD   +V+ SD+ G+ Q+Y +  NG   +RI+ + + +  +P  SP 
Sbjct: 286 TNGRSNNTEPTWMPDGQTLVYTSDQGGRPQIYKININGGTPERITWEGKQNQ-NPAVSPD 344

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  +        +  I     + +  + L +    + P+ +P+G  +I+S  +   T  +
Sbjct: 345 GSFLVMVSSESGRQHIAKQDLETNAVQYLTDTFLDETPSIAPNGTMVIYSSTQGLGTILR 404

Query: 418 LYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           L S D  GR    L  T      P W  FM
Sbjct: 405 LVSTD--GRFKARLPATDGQVKSPAWSPFM 432


>gi|329893685|ref|ZP_08269819.1| tolB protein precursor [gamma proteobacterium IMCC3088]
 gi|328923612|gb|EGG30924.1| tolB protein precursor [gamma proteobacterium IMCC3088]
          Length = 433

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 204/445 (45%), Gaps = 27/445 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE----V 68
           MK     ++V +  F      A + +       +P  IA + F    E  G   E    V
Sbjct: 1   MKAFFLSVVVSVATFLSPVARAELVIEITQGIDNPTVIAISPFAW--EGPGVAPEDVAFV 58

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +  DL RS  F  +++++     +  + I  F+DW  + AQ L+ GR+   G+  L  +F
Sbjct: 59  IQNDLYRSGQFAPVARENMLGTPSRDEDI-FFRDWRMVNAQYLLIGRL--SGEQTLTADF 115

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            L+DV  +  +I     +     R +AH I+D +Y ++TG  G F +++L+V+ + + G 
Sbjct: 116 ALYDVNKQTLVIQGSEQAVRGEVRTLAHRIADRVYTALTGIPGAFATKLLYVAVTPIPGE 175

Query: 189 IKN-SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--DILRVYLMDTR 245
                L + D DGA  R L  SR+ IL  P +SP+  ++AY +++     I R  L    
Sbjct: 176 KDYYELTLADSDGARPRVLLASREPIL-APTWSPDATEIAYVSFETSRPAIFRQNLQTG- 233

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              A +++  FR +  +P +S +GKR  + + KD   DIY +DL++ A ER+T    I+ 
Sbjct: 234 ---AREQLTAFRGLNGSPSWSPDGKRMAMVLSKDGNPDIYVLDLETYALERITRHYDIDT 290

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-GDLIAFT 364
             ++ PD   ++F SDR G+ Q+Y          R++   E SY       Q G  +   
Sbjct: 291 EPTWMPDGKSLLFTSDRPGRPQIYRYDFVTGLTDRVTY--EGSYNARARVAQDGRNVVLV 348

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + I V+  +  +   L      ++P+ +P+G  ++++ K+ G       S+D  
Sbjct: 349 HQQDGDYKIAVLDLETRRLTALTSTDLDESPSIAPNGSMVLYATKQAGRGILAAVSVDGG 408

Query: 425 GRNETLINTPAY---ASDPQWVGFM 446
            R     N PA      +P W  ++
Sbjct: 409 AR----FNLPARDGEVREPSWSPYL 429


>gi|295675612|ref|YP_003604136.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           CCGE1002]
 gi|295435455|gb|ADG14625.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           CCGE1002]
          Length = 430

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 209/447 (46%), Gaps = 27/447 (6%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L ++  +   L+ +GG    + +A + V       +   IA   F +      +VS
Sbjct: 3   LMTKLGLRTLVATCLIAVGG----AANAQLNVLVTGVGSTQFPIATANFANEANSPQQVS 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V +DLQRS  F  +  D+    ++  DS+     W + GA   V G V +    +  V
Sbjct: 59  TIVRQDLQRSGKFTNV--DAGSTPVSETDSV-DLGAWKAKGANAFVAGSVNRLPNGQYEV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F+L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V +S   
Sbjct: 116 RFKLYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGNRGVFATRLSYVIKSGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG +  ++  S  + +  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQDA-HIALSSPEPIISPAWSPDGTKVAYVSFEKKKPI-VYIHDLPT 229

Query: 247 DRAPKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            R   RI   + +    AP +S +G+   +++ +     I++V+   +   RLT    I+
Sbjct: 230 GR---RIVVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSID 286

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASY-FDPVWSPQGDL 360
              +YSPD   I F SDR G  Q+Y M + G    + +R++     SY   P  SP G  
Sbjct: 287 TEPTYSPDGQWIYFTSDRGGAPQIYKMPAQGESAGNAQRVT--FTGSYNTSPRVSPDGKE 344

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +A+    G  F + +    G     L + S+ ++P+++ +G+ ++++ + +G     L +
Sbjct: 345 LAYISRVGGGFKLYIQDLQGGTATGLTDTSHDESPSFAANGQYILYATQVNGR--GVLAA 402

Query: 421 IDLNGRNETLINTPAYA-SDPQWVGFM 446
           +  +GR   +++    +  +P W  FM
Sbjct: 403 VSTDGRTRQVLSVQGGSVREPSWGPFM 429


>gi|238026337|ref|YP_002910568.1| translocation protein TolB [Burkholderia glumae BGR1]
 gi|237875531|gb|ACR27864.1| Putative TolB protein [Burkholderia glumae BGR1]
          Length = 430

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 199/426 (46%), Gaps = 24/426 (5%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           ++ +A V V       +   IA   FV+   L   V+ VV  DL R+  F+ I  D+   
Sbjct: 19  SAANAQVNVLITGVGSTQFPIATANFVNEAGLPQSVTAVVRADLARTGKFSNI--DAGST 76

Query: 90  KITNPDSIP-RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
            I+  +S P  +  W + GA  LV G V +E   +++V+F L+D   ++ + G    ++ 
Sbjct: 77  PIS--ESAPVDYSAWKAKGANALVAGTVNREANGQVKVDFMLFDTVKQQSLGGLSLTATG 134

Query: 149 --ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN-IRY 205
                RK  H I+D IYQ + G +G F++R+ +V+ S      K  L + D DG N I  
Sbjct: 135 DVEGMRKTGHKIADFIYQKLLGVRGVFSTRLSYVTHSGG----KYRLLISDSDGENAIPA 190

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           LT S  + +  P +SP+  KVAY +++    + VY+ D    R    I N +    AP +
Sbjct: 191 LTSS--EPIISPAWSPSGTKVAYVSFELRKPV-VYIHDLPTGRR-YVISNQKGNNSAPAW 246

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           + +G+   +++       IYSV        RLT +  I+    YSPD   I F SDR G+
Sbjct: 247 APDGQTLAVALSLTGNTQIYSVSATGTGLRRLTQSSSIDTEPFYSPDGRWIYFTSDRGGQ 306

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            Q+Y M + G       +      ++  P  SP G L+A+   +G  F + V        
Sbjct: 307 PQIYRMPAQGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYISRTGGGFKLYVQDLQTGAA 366

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA---SDP 440
             +   ++ ++P+++ +G+ ++++ +  G   S L ++  +G +   I  P      S+P
Sbjct: 367 NAVTNTTHDESPSFAANGQYILYATRAGGR--SVLAAVPSDGSSPPQI-LPVQGGSFSEP 423

Query: 441 QWVGFM 446
            W  FM
Sbjct: 424 SWGPFM 429


>gi|146329411|ref|YP_001210056.1| TolB protein [Dichelobacter nodosus VCS1703A]
 gi|146232881|gb|ABQ13859.1| TolB protein [Dichelobacter nodosus VCS1703A]
          Length = 424

 Score =  132 bits (333), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 183/383 (47%), Gaps = 13/383 (3%)

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G K+  +++ DL ++ +F  ++ +  + +  +P  I  + +++ LGA  +  GR +    
Sbjct: 47  GVKMEFIIASDLHKTGLFQPVAPEQIRNRPNSPAEI-DYAEFSGLGASYVALGRTLDANG 105

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                +F L  V ++K I  ++  S  A  R  AH  +D I Q +TG +G F+S++ +V 
Sbjct: 106 SS--AQFVLTQVANKKVIFNEQVSSVDA--RATAHLAADLILQRLTGVQGAFSSKVAYVL 161

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E   +     SL + D DGAN R +  S    +  P +S + +++A+ TY         L
Sbjct: 162 EQANAKGRLYSLIISDFDGAN-RQVVYSSAMPIVSPSWSRDGRQIAFMTYARN---HAQL 217

Query: 242 MDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEA-MDIYSVDLQSNATERLTN 299
           +   +    +R+   F     +P +S  G++  IS   ++  MDIY +DL S A +R+TN
Sbjct: 218 VIQDVASGSRRVVAEFEGTASSPSWSPEGRQLAISRADEQGNMDIYLLDLASGAQQRITN 277

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              I+    +SPD   I F SDR G  Q+Y M  +G +  R       S    + SP G 
Sbjct: 278 HAAIDTEPEFSPDGRFIYFTSDRAGNPQIYRMDRSGGNVNRAVVGGNYSTSSEL-SPDGQ 336

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +  T+ SG  + IG+ +      + L      +  T+SP+G+ ++++  + G T  K+ 
Sbjct: 337 SMVLTRQSGGGYQIGLYQLGSGSFQALTNGRLDEGATFSPNGQMIMYTATEGGRTVIKMI 396

Query: 420 SIDLNGRNETLINTPAYASDPQW 442
           ++   G  +TL +      DP W
Sbjct: 397 NLK-GGVTQTLSDPSGRLRDPAW 418


>gi|227356659|ref|ZP_03841045.1| TolB protein [Proteus mirabilis ATCC 29906]
 gi|227163167|gb|EEI48098.1| TolB protein [Proteus mirabilis ATCC 29906]
          Length = 431

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 209/449 (46%), Gaps = 27/449 (6%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVA-TNSANYS-PVSIAFTKFVSIDELGGK 64
           + + LN+   L +L V       T  +A V++  T   N + P+ +   K+    ++   
Sbjct: 1   MKQALNVIFGLLILCVT------TLANAEVRIEITQGVNTARPIGVVPFKWEGTGQMPED 54

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQK-ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           ++ V++ DL+ S  FN I  +   Q+ +T  +  P    W +LG   +V GRV      +
Sbjct: 55  IAGVIAADLRNSGKFNPIDMNRLPQQPVTASEVQPAL--WTALGIDSVVVGRVQPSADGQ 112

Query: 124 LRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             V ++L DV      ++ +  +     W R  AHT SD+I++ +TG +G F +RI +V 
Sbjct: 113 YVVSYQLVDVAGSPGAVLAQSEYKISNKWLRYAAHTASDEIFEKLTGIRGAFRTRIAYV- 171

Query: 182 ESVVS--GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILR 238
             VV+  G     L V D DG N   +  S  Q L  P +SP+  K+AY T++  +  L 
Sbjct: 172 --VVTNGGAYPYELRVSDYDGFNQDRVYRS-SQPLMSPAWSPDGAKLAYVTFESGQSALV 228

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V  + T   R   +I +F     AP FS +G +   ++ K  ++++Y +DL S    ++T
Sbjct: 229 VQTLATGEVR---QIASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMDLASGNMTQVT 285

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           N    N   ++ PD   +V+ SD+ G+ Q+Y +  NG   +RI+ + + +  +P  SP G
Sbjct: 286 NGRSNNTEPTWMPDGQTLVYTSDQGGRPQIYKININGGTPERITWEGKQNQ-NPAVSPDG 344

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +        +  I     + +  + L +    + P+ +P+G  +I+S  +   T  +L
Sbjct: 345 SFLVMVSSESGRQHIAKQDLETNAVQYLTDTFLDETPSIAPNGTMVIYSSTQGLGTILRL 404

Query: 419 YSIDLNGR-NETLINTPAYASDPQWVGFM 446
            S D  GR    L  T      P W  FM
Sbjct: 405 VSTD--GRFKARLPATDGQVKSPAWSPFM 431


>gi|108760781|ref|YP_633893.1| tolB protein [Myxococcus xanthus DK 1622]
 gi|32699694|sp|Q84FF7|TOLB_MYXXA RecName: Full=Protein tolB; AltName: Full=Adventurous gliding
           motility protein W; Flags: Precursor
 gi|118574586|sp|Q1D0D0|TOLB_MYXXD RecName: Full=Protein tolB; Flags: Precursor
 gi|27804811|gb|AAO22855.1| adventurous gliding motility protein W [Myxococcus xanthus]
 gi|108464661|gb|ABF89846.1| tolB protein [Myxococcus xanthus DK 1622]
          Length = 431

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 203/407 (49%), Gaps = 32/407 (7%)

Query: 41  NSANYSPVSIA----FTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSF---KQKITN 93
           + AN+ P+ +A     T+      L        S DL  S +  ++ +  F    ++   
Sbjct: 26  SGANFRPLPVAVPAPLTQNDGAKALVAPFDSAFSFDLTASGILQVLDRKGFTADAKEGMA 85

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA-SWR 152
             SI  F  W  +GA+ LV   + ++G   LR E RL++V   ++ + K    +PA +  
Sbjct: 86  AASI-NFSRWADVGAEALVKVSLAQDGG-VLRGELRLFNVGTGREDL-KVSKDAPADNAS 142

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
            +AH ++D +Y+  T E   F SRI +V ++  +      + V D DG N R LT     
Sbjct: 143 LLAHRLADALYRHFTREPSPFLSRITYVRKAGTN----RDVYVADWDGGNARALTKGGIN 198

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           IL  P  S +  +VA+ TY  ++   +Y+     +   K + +   M     FS +GKR 
Sbjct: 199 IL--PALSQDGSQVAFTTYR-KNRPDIYVQSPGGEA--KAVISGGQMATGAAFSPDGKRI 253

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVM 331
             S+ + E+  +Y  +   +    LT+T + +N S ++SPD  +I F S+R G  Q+Y+M
Sbjct: 254 AYSLAEGESAQVYVANADGSGARALTDTPYGLNTSPTWSPDGKRIAFVSNRGGSPQVYIM 313

Query: 332 QSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQERLL 386
            ++G+  +R++   + +Y   P WSP+GDLI FT    + + + F + V  + G   RL 
Sbjct: 314 NADGTGVRRLT--FQGNYNQTPDWSPRGDLIVFTARDERNAFDLFTVSV--ETGKVTRLT 369

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            +  + + P +SP+GR ++F+  ++G  GS+LY +  +G N+  + T
Sbjct: 370 QDQGSNEEPAFSPNGRLIVFTSTRNG--GSQLYVMTADGNNQLPLRT 414



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 89/169 (52%), Gaps = 12/169 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD---TRIDRA 249
           + V + DG+  R LT +   +   P +SP+ +++A+ + +     +VY+M+   T + R 
Sbjct: 265 VYVANADGSGARALTDTPYGLNTSPTWSPDGKRIAFVS-NRGGSPQVYIMNADGTGVRRL 323

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISA 307
             + GN+      P +S  G   ++   +DE  A D+++V +++    RLT     N   
Sbjct: 324 TFQ-GNYNQT---PDWSPRGD-LIVFTARDERNAFDLFTVSVETGKVTRLTQDQGSNEEP 378

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           ++SP+   IVF S R G  QLYVM ++G++Q  +  +K  +Y  P WSP
Sbjct: 379 AFSPNGRLIVFTSTRNGGSQLYVMTADGNNQLPLRTEK-GTYQTPDWSP 426


>gi|262404182|ref|ZP_06080737.1| TolB protein precursor [Vibrio sp. RC586]
 gi|262349214|gb|EEY98352.1| TolB protein precursor [Vibrio sp. RC586]
          Length = 450

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 213/456 (46%), Gaps = 36/456 (7%)

Query: 17  LCLLLVLIG-GFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           L  +L+LIG GF   +  A   V T+  + + P++I   K+    +L   VS V++ DLQ
Sbjct: 5   LIFVLMLIGTGFTNVANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIASDLQ 64

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV- 133
           RS  F+ +      Q   + + I  F  W SLG   L+TG + +  +    + ++L D+ 
Sbjct: 65  RSGKFSPVPTSKMPQTPYSEEQI-DFGKWTSLGVDSLLTGTITQNAEGSYVISYQLVDIV 123

Query: 134 -------------KDRKQIIGK------KFFSSPAS-WRKIAHTISDDIYQSITGEKGDF 173
                        +D + ++ K      K  + PAS  R+ AH I+D +Y+ +TGE+G F
Sbjct: 124 RGQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRLREYAHRIADLVYEELTGERGAF 183

Query: 174 NSRILFVSESVVSG--IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +R+ +V   VV+        L + D DG N R +  S+ Q L  P +SP+ Q +AY ++
Sbjct: 184 LTRVAYV---VVNDKDPYPYQLRIADYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYVSF 239

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +     +Y+M+    +  +++ +F     APRFS +GK   + + K   + +Y++DL +
Sbjct: 240 QNGQA-EIYMMNIYSGQR-EKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLAT 297

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              + +T+    N    + PD   ++F SDR GK Q+Y +     + KR++     +   
Sbjct: 298 RRLKEVTSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLTSGETKRLTWQGSQNLGG 357

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            + +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S   +
Sbjct: 358 QI-TPDGKFLVMVNRSDSGFNLAKQDLETGALQILTKTLLDESPSIAPNGGMVIYSSIYN 416

Query: 412 GDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
                 + SID  GR    L  T      P W  F+
Sbjct: 417 KANVLSMVSID--GRFKARLPATNGRVRAPAWSPFL 450


>gi|32699701|sp|Q8DAM3|TOLB_VIBVU RecName: Full=Protein tolB; Flags: Precursor
          Length = 443

 Score =  132 bits (332), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 209/457 (45%), Gaps = 46/457 (10%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDV 78
           LLVL+      +  A   + T+  + + P++I   K+     L   +S VV+ DLQRS  
Sbjct: 3   LLVLLSSVTNVANAALELIITDGIDSARPIAIVPFKWQGTKALPVDISSVVASDLQRSGK 62

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV----- 133
           F+ +      Q   N   I  F  W +LG   L+TG V +  K    + ++L DV     
Sbjct: 63  FSPVPTSKMPQTPYNESEI-NFDAWTNLGVDTLLTGSVTQNEKGEYVINYQLVDVVRGQL 121

Query: 134 --------KDRKQIIGKK--FFSSPAS-----WRKIAHTISDDIYQSITGEKGDFNSRIL 178
                   +D + ++ K    F+  A+      R+ AH ISD IY+ +TGE+G F +RI 
Sbjct: 122 TSGQSRALEDGQLVLSKDHVLFNKVATITAPRMREYAHRISDLIYEQLTGERGAFLTRIA 181

Query: 179 FVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED- 235
           +V   VV+   K    L V D DG N R +  S+ Q L  P +SP+ +++AY ++ +   
Sbjct: 182 YV---VVNDKDKFPYQLRVADYDGFNERLVLRSK-QPLMSPAWSPDGRRLAYVSFQNGQA 237

Query: 236 ---ILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              +L +Y  +  ++   P+  G       APRFS +GK+  I + K  ++ IY++DLQ+
Sbjct: 238 EIFVLNIYTGEHEKLTSFPRHNG-------APRFSPDGKKLAIVLSKTGSLQIYTLDLQT 290

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYF 350
               ++T     N    + PD   ++F SDR GK Q+Y V  S+GS  +   Q  +    
Sbjct: 291 RQLTQITRDRSNNTEPFWHPDGKSLIFTSDRGGKPQIYRVNLSDGSTSRLTWQGSQN--L 348

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S   
Sbjct: 349 GGQITPDGRFLIMVNRSDSGFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGMVIYSSIY 408

Query: 411 DGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           D      + SID  GR    L  T      P W  F+
Sbjct: 409 DKKNVLSMVSID--GRFKARLPATNGRVRAPAWSPFL 443


>gi|120599219|ref|YP_963793.1| translocation protein TolB [Shewanella sp. W3-18-1]
 gi|146292707|ref|YP_001183131.1| translocation protein TolB [Shewanella putrefaciens CN-32]
 gi|166988084|sp|A4Y5U9|TOLB_SHEPC RecName: Full=Protein tolB; Flags: Precursor
 gi|166988086|sp|A1RKP4|TOLB_SHESW RecName: Full=Protein tolB; Flags: Precursor
 gi|120559312|gb|ABM25239.1| TolB, N-terminal domain protein [Shewanella sp. W3-18-1]
 gi|145564397|gb|ABP75332.1| TolB, N-terminal domain protein [Shewanella putrefaciens CN-32]
          Length = 442

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 188/379 (49%), Gaps = 28/379 (7%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKD 122
           +++VV  DL RS  F  + +    Q+  N  ++ +FQ   W S+GA+ LV G V   G D
Sbjct: 54  IADVVMSDLVRSGTFKPLDELGLPQR--NIGAVAQFQASAWGSVGAEALVLGSVKPYGTD 111

Query: 123 RLRVEFRLWD-VKDRKQII------------GKKFFSSPASWRKIAHTISDDIYQSITGE 169
           +  V F L D VK + Q +             ++   S A +R+  H ISD +Y+ +TG 
Sbjct: 112 QYLVSFDLIDLVKAQNQSLKGAVSPTEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGI 171

Query: 170 KGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           +G F +RI +V   VV+   K    L + D DG N + L  S +  L  P +SP+ +++A
Sbjct: 172 RGAFLTRISYV---VVNHTQKAPYQLMIADYDGFNEQMLLRSPEP-LMSPTWSPDGRRLA 227

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y +++++    +++ D    +   ++ +F  +  AP FS +GK   +++ KD   +IY +
Sbjct: 228 YVSFENKKA-EIFVQDL-YTQVRTKVSSFPGINGAPAFSPDGKSLAVTLSKDGQPEIYVI 285

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D+ + A +R+TN   I+   S+ PD   ++F S+R GK QLY +        R + + E 
Sbjct: 286 DIATKAIKRITNHYAIDTEPSWYPDGKSLLFTSERGGKPQLYRVDLASGKVTRETFEGEW 345

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +    + +P G  + F   +  KF I  M  +    ++L      ++P+ +P+G  +I+ 
Sbjct: 346 NLGGSI-TPDGRSMIFVNRTNGKFNIARMDLNTRFMQVLTSTRLDESPSVAPNGTMVIYG 404

Query: 408 RKKDGDTGSKLYSIDLNGR 426
               G     L ++  +GR
Sbjct: 405 TTHQGK--QVLAAVSTDGR 421


>gi|319426011|gb|ADV54085.1| TonB biopolymer transport system periplasmic component, TolB
           [Shewanella putrefaciens 200]
          Length = 442

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 188/379 (49%), Gaps = 28/379 (7%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKD 122
           +++VV  DL RS  F  + +    Q+  N  ++ +FQ   W S+GA+ LV G V   G D
Sbjct: 54  IADVVMSDLVRSGTFKPLDELGLPQR--NIGAVAQFQASAWGSVGAEALVLGSVKPYGTD 111

Query: 123 RLRVEFRLWD-VKDRKQII------------GKKFFSSPASWRKIAHTISDDIYQSITGE 169
           +  V F L D VK + Q +             ++   S A +R+  H ISD +Y+ +TG 
Sbjct: 112 QYLVSFDLIDLVKAQNQSLKGPVSPTEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGI 171

Query: 170 KGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           +G F +RI +V   VV+   K    L + D DG N + L  S +  L  P +SP+ +++A
Sbjct: 172 RGAFLTRISYV---VVNHTQKAPYQLMIADYDGFNEQMLLRSPEP-LMSPTWSPDGRRLA 227

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y +++++    +++ D    +   ++ +F  +  AP FS +GK   +++ KD   +IY +
Sbjct: 228 YVSFENKKA-EIFVQDL-YTQVRTKVSSFPGINGAPAFSPDGKSLAVTLSKDGQPEIYVI 285

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D+ + A +R+TN   I+   S+ PD   ++F S+R GK QLY +        R + + E 
Sbjct: 286 DIATKAIKRITNHYAIDTEPSWYPDGKSLLFTSERGGKPQLYRVDLASGKVTRETFEGEW 345

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +    + +P G  + F   +  KF I  M  +    ++L      ++P+ +P+G  +I+ 
Sbjct: 346 NLGGSI-TPDGRSMIFVNRTNGKFNIARMDLNTRFMQVLTSTRLDESPSVAPNGTMVIYG 404

Query: 408 RKKDGDTGSKLYSIDLNGR 426
               G     L ++  +GR
Sbjct: 405 TTHQGK--QVLAAVSTDGR 421


>gi|91781923|ref|YP_557129.1| translocation protein TolB [Burkholderia xenovorans LB400]
 gi|118574575|sp|Q145B2|TOLB_BURXL RecName: Full=Protein tolB; Flags: Precursor
 gi|91685877|gb|ABE29077.1| Putative periplasmic TolB protein [Burkholderia xenovorans LB400]
          Length = 430

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/445 (23%), Positives = 208/445 (46%), Gaps = 23/445 (5%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L ++  +   L+ +GG    + +A + V       +   IA   F +      +VS
Sbjct: 3   LMTKLGLRTLVASCLIAVGG----AANAQLNVLVTGVGSTQFPIATANFANEANSPQQVS 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V +DLQRS  F  I  D+    ++  DS+     W + GA   V+G V +    +  V
Sbjct: 59  TIVRQDLQRSGKFTNI--DAGATPVSETDSV-DLGSWKAKGANAFVSGSVNRLPNGQYEV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F+L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V ++   
Sbjct: 116 RFKLYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRGVFATRLSYVIKTGG- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG +  ++  S  + +  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQDA-HIALSSPEPIISPAWSPDGTKVAYVSFEKKKPI-VYIHDLPT 229

Query: 247 DRAPKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            R   RI   + +    AP +S +G+   +++ +     I++V+   +   RLT    I+
Sbjct: 230 GR---RIVVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSID 286

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIA 362
               +SPD   I F SDR G+ Q+Y M + G +     +      ++  P  SP G  +A
Sbjct: 287 TEPCFSPDGQSIYFTSDRGGQPQIYKMSAQGENAGAAQRVTFTGSYNTSPRVSPDGKQLA 346

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +    G  F + +    G+    L + ++ ++P+++ +G+ ++++ + +G     L ++ 
Sbjct: 347 YISRVGGGFKLYIQDLQGNTATGLTDTTHDESPSFAANGQYILYATQVNGR--GVLAAVS 404

Query: 423 LNGRNETLINTPAYA-SDPQWVGFM 446
            +GR   +++    +  +P W  FM
Sbjct: 405 TDGRTRQVLSVQGGSVREPSWGPFM 429


>gi|296162180|ref|ZP_06844976.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           Ch1-1]
 gi|295887566|gb|EFG67388.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           Ch1-1]
          Length = 430

 Score =  132 bits (331), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/445 (23%), Positives = 208/445 (46%), Gaps = 23/445 (5%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L ++  +   L+ +GG    + +A + V       +   IA   F +      +VS
Sbjct: 3   LMTKLGLRTLVASCLIAVGG----AANAQLNVLVTGVGSTQFPIATANFANEANSPQQVS 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V +DLQRS  F  I  D+    ++  DS+     W + GA   V+G V +    +  V
Sbjct: 59  TIVRQDLQRSGKFTNI--DAGSTPVSETDSV-DLGSWKAKGANAFVSGSVNRLPNGQYEV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F+L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V ++   
Sbjct: 116 RFKLYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRGVFATRLSYVIKTGG- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG +  ++  S  + +  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQDA-HIALSSPEPIISPAWSPDGTKVAYVSFEKKKPI-VYIHDLPT 229

Query: 247 DRAPKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            R   RI   + +    AP +S +G+   +++ +     I++V+   +   RLT    I+
Sbjct: 230 GR---RIVVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSID 286

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIA 362
               +SPD   I F SDR G+ Q+Y M + G +     +      ++  P  SP G  +A
Sbjct: 287 TEPCFSPDGQSIYFTSDRGGQPQIYKMSAQGENAGAAQRVTFTGSYNTSPRVSPDGKQLA 346

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +    G  F + +    G+    L + ++ ++P+++ +G+ ++++ + +G     L ++ 
Sbjct: 347 YISRVGGGFKLYIQDLQGNTATGLTDTTHDESPSFAANGQYILYATQVNGR--GVLAAVS 404

Query: 423 LNGRNETLINTPAYA-SDPQWVGFM 446
            +GR   +++    +  +P W  FM
Sbjct: 405 TDGRTRQVLSVQGGSVREPSWGPFM 429


>gi|312882597|ref|ZP_07742337.1| translocation protein TolB [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369757|gb|EFP97269.1| translocation protein TolB [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 454

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 213/474 (44%), Gaps = 58/474 (12%)

Query: 11  LNMK---INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK--- 64
           +N+K   I L  LLVL   F   +  A +++       S   IA   F      G K   
Sbjct: 1   MNIKRKIIQLFGLLVLFQSF---AASAKLEIVITDGIDSARPIAILPFKWEGSAGQKPDN 57

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP--RFQDWNSLGAQVLVTGRV-IKEGK 121
           +SEV+S DL RS  F  +      Q    P S+    F +W  LG   LVTG V     K
Sbjct: 58  LSEVISSDLMRSGKFKPLD---VSQMPETPYSVSDINFSEWTKLGVDALVTGTVGFDATK 114

Query: 122 DRLRVEFRLWDVKDRKQI----------------------IGKKFFSSPASWRKIAHTIS 159
            R  + ++L D+  R Q+                      + K+  ++ A  R +AH IS
Sbjct: 115 QRYVINYQLVDIV-RGQLTNGQAKSLSSDGELVLSQDYVLLNKRMTATSAQMRAVAHRIS 173

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNS------LCVMDRDGANIRYLTPSRDQI 213
           + IY+ +TGEKG F +RI +V       ++K+       L V D DG N + +  SR Q 
Sbjct: 174 NRIYEQLTGEKGAFETRIAYV-------VVKDGDSYPYQLRVSDYDGFNEKLVLSSR-QP 225

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           L  P +SP+ +++AY ++ +     +Y+MD    +  K + ++     AP+FS +GK+  
Sbjct: 226 LMSPSWSPDGKQLAYVSFQNNKA-EIYIMDIYTGKREK-VTSYPRHNGAPKFSPDGKKLA 283

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           + + K   + +Y++D+ +    ++TN+   N    + PD   ++F SDR GK Q+Y +  
Sbjct: 284 LVLSKTGNLQVYTLDIATKRLTQITNSRSNNTEPFWYPDGKSLIFTSDRGGKPQIYNVDL 343

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             +  KR++ +   +    + +P G  I     S   F +  +  + +  ++L      +
Sbjct: 344 ATNATKRLTWEGSQNLGGQI-TPDGRFIVMVNRSQSGFNLAKLDLETNSMQILTHTQLDE 402

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           +P+ SP+G  +I+S   +      + SID  GR    L  T      P W  F+
Sbjct: 403 SPSISPNGGMVIYSSIYNQTNVLSMVSID--GRFKARLPATNGRVRAPAWSPFL 454


>gi|254787335|ref|YP_003074764.1| translocation protein TolB [Teredinibacter turnerae T7901]
 gi|237684356|gb|ACR11620.1| Tol-Pal system beta propeller repeat protein TolB [Teredinibacter
           turnerae T7901]
          Length = 431

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 188/376 (50%), Gaps = 26/376 (6%)

Query: 46  SPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF------NLISQDSFKQKITNPDSIPR 99
           +P  IA   F    +L   + ++VS DL RS  F      +++S  S +Q I        
Sbjct: 32  NPTPIAIVPFSGSGDLPENIQQIVSSDLLRSGFFRPLAPSDMLSLPSRQQDIF------- 84

Query: 100 FQDWNSLGAQVLVTGRVIKEG---KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
           ++DW  LG + LV G+V +      D   V+F+L+DV  ++ ++ K    S A  R IAH
Sbjct: 85  YRDWRILGVEYLVIGQVREAAVGAADDYIVDFQLYDVLGQRNVMQKTITGSVAELRDIAH 144

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            ISD +YQ++TG +G F+++IL++ +    G  +  L   D DGA  + L  + + +L  
Sbjct: 145 EISDVLYQTLTGIRGAFSTKILYIEDLRREGAGRYRLVKADADGAREKVLFTTSEPLL-S 203

Query: 217 PRFSPNQQKVAYATYDD--EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           P +S +  +VAY +++     I R  L+        +++ NF+ +  AP +S +  +  +
Sbjct: 204 PTWSNDMTQVAYVSFETGRPAIFRQNLLTG----VREQLTNFKGLNGAPAWSPDDSKLAM 259

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + KD   ++Y++D+ S    R+TN   I+   +++ D   ++F S+R G  Q+Y +   
Sbjct: 260 VLSKDGNPELYTLDIASKKLTRVTNHFAIDTEPNWTADGKGLIFTSNRGGNPQIYQVGLE 319

Query: 335 GSDQKRISQDKEASYFDPVWSPQG-DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
               +R++ + + +   P  +P G  L+   ++ G  F I          R+L E    +
Sbjct: 320 TGRVERLTFEGDYNA-RPRVTPDGKSLVMVHRYKG-VFHIAWQDIASGDMRILTETWLDE 377

Query: 394 APTWSPSGRSLIFSRK 409
           +P+ +P+G  L+++ K
Sbjct: 378 SPSIAPNGAMLLYATK 393


>gi|71065810|ref|YP_264537.1| TolB periplasmic receptor [Psychrobacter arcticus 273-4]
 gi|71038795|gb|AAZ19103.1| probable TolB periplasmic receptor [Psychrobacter arcticus 273-4]
          Length = 430

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 191/404 (47%), Gaps = 29/404 (7%)

Query: 50  IAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
           +AF  F     L    S ++  DL ++++  + SQ+  +Q  ++ +       W S+G  
Sbjct: 44  VAFVPFAGDSVL----SPIIVNDLSKTEL-KITSQNLPQQPRSSSELSGTLPVWQSMGIP 98

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS---PASWRKIAHTISDDIYQSI 166
            LV G   +  + ++  ++ + +VK  + I GK+  ++     S R   H I+D +Y+ I
Sbjct: 99  YLVVGST-RSSRGKVVTDYEVIEVKTGRVIEGKQTLTTDNNKDSMRYAGHVIADKVYELI 157

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           TG  GDF+ RI ++ E + +G  K S L +MD DG N + +T     I F P +SP+  +
Sbjct: 158 TGIPGDFSGRIAYIEE-IGAGKAKVSRLKIMDADGENAKTITEVSGSI-FSPAWSPDGNR 215

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +AYA   D+    +Y+       A   +  F    L+P FS +G + L S   + + DIY
Sbjct: 216 IAYAVQRDKSYPVIYVQSVSGGGA-TPLTPFPGSNLSPSFSPDGSKILFSSSFEGSADIY 274

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQ 343
            +        RLTN     +  SY+PD    VF SD+ G  K Q+Y  +       ++S 
Sbjct: 275 EMSASGGQPRRLTNWPSSEVQPSYAPDGRSFVFVSDKAGFNKPQIYRYEFGSGRTTKVSN 334

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
              A+   P +S  G  IAF   +G   AI  M   G+    L      +AP++SP+G+ 
Sbjct: 335 SGYAT--SPQFSSDGSQIAF--LNGRSAAI--MNSGGAVTANLGNTGIDEAPSFSPNGKR 388

Query: 404 LIFSRKKDGDTGSKLYSIDLNG------RNETLINTPAYASDPQ 441
           ++++ K+ G     L    LNG        + +I +P +++ P+
Sbjct: 389 VVYASKQGGK--GVLTIKSLNGGEAFGKSGQGVIRSPVWSASPR 430



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 3/139 (2%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++SPD ++I +   R+    +  +QS              S   P +SP G  I F+ 
Sbjct: 206 SPAWSPDGNRIAYAVQRDKSYPVIYVQSVSGGGATPLTPFPGSNLSPSFSPDGSKILFSS 265

Query: 366 FSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  I  M   G Q R L     S +Q P+++P GRS +F   K G    ++Y  + 
Sbjct: 266 SFEGSADIYEMSASGGQPRRLTNWPSSEVQ-PSYAPDGRSFVFVSDKAGFNKPQIYRYEF 324

Query: 424 NGRNETLINTPAYASDPQW 442
                T ++   YA+ PQ+
Sbjct: 325 GSGRTTKVSNSGYATSPQF 343


>gi|119775221|ref|YP_927961.1| translocation protein TolB [Shewanella amazonensis SB2B]
 gi|166988080|sp|A1S7D5|TOLB_SHEAM RecName: Full=Protein tolB; Flags: Precursor
 gi|119767721|gb|ABM00292.1| tolB protein [Shewanella amazonensis SB2B]
          Length = 441

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 200/419 (47%), Gaps = 36/419 (8%)

Query: 50  IAFTKFV--SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF--QDWNS 105
           IA   FV      +  ++S+VV+ DL RS  F  +  D+     +   ++  F  Q W  
Sbjct: 37  IAVVPFVWQGTGPVPSQISDVVASDLTRSGTFKPL--DALGLPQSGISTLAEFAPQKWTG 94

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS-------------SPASWR 152
           + A+  V G +   G D+  V F L D+  + Q+ G+   +             + A +R
Sbjct: 95  INAEAAVVGAIKPYGPDQYLVTFDLIDLL-KAQLAGQAPLNKQDLLLDSRQTVITAAQFR 153

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS--LCVMDRDGANIRYLTPSR 210
           +  H ISD +Y+ +TG +G F +RI +V   VV+   K    L + D DG N   L  S 
Sbjct: 154 QYGHRISDVVYEKLTGIRGAFLTRIAYV---VVNHAEKAPYRLMIADYDGYNEHMLLRSP 210

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +  L  P +SP+ +++AY ++++     +++ D    +A  ++ +F  +  AP FS +GK
Sbjct: 211 EP-LMSPAWSPDGRRLAYVSFENRKA-EIFVQDI-FTQARTKVSSFPGINGAPSFSPDGK 267

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
              +++ KD   +IY++D+ +  T R+TN   I+   S+ PD   ++  S+R G+ QLY 
Sbjct: 268 TLAVTLSKDGQSEIYTIDIATKTTRRITNHYAIDTEPSWFPDGKSLLITSERGGRPQLYK 327

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +     R++ D E +    + +P G  + F   +  KF I  M  +    ++L    
Sbjct: 328 VELDSGKLTRLTFDGEWNLGGSI-TPDGRTLIFVNRTNGKFNIARMDLETRFMQVLTTTR 386

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFM 446
             ++P+ +P+G  +I+     G     L ++  +GR +  +  PA   +   P W  F+
Sbjct: 387 LDESPSVAPNGTMVIYGTTHQGR--QVLAAVSTDGRFKARL--PAGQGEVKSPSWSPFL 441


>gi|323496600|ref|ZP_08101653.1| translocation protein TolB [Vibrio sinaloensis DSM 21326]
 gi|323318346|gb|EGA71304.1| translocation protein TolB [Vibrio sinaloensis DSM 21326]
          Length = 439

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 192/427 (44%), Gaps = 39/427 (9%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P++I   K+    +L   VS +++ DLQRS  F+ +      Q   N   +  F  W  L
Sbjct: 25  PIAIVPFKWEGTSKLPQDVSAIIASDLQRSGKFSPVPTSKMPQTPYNETEV-NFDAWTGL 83

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDV--------------KDRKQIIGKK--FFSSPAS 150
           G   L+TG + +  +    + ++L DV               D + ++ K    F+  A+
Sbjct: 84  GVDALLTGTITQNAEGNYVINYQLVDVIRGQLTQGQSKALSTDGQLVLSKDHVLFNKRAT 143

Query: 151 -----WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
                 R+ AH ISD +YQ +TGE+G F +RI +V  +         L V D DG N R 
Sbjct: 144 VPGERLREYAHRISDLVYQELTGERGAFLTRIAYVVVNDKDKKYPYQLRVSDYDGYNERL 203

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDED----ILRVYLMDT-RIDRAPKRIGNFRSMI 260
           +  S+ Q L  P +SP+ QK+AY ++ +      I+ +Y  +  ++   P+  G      
Sbjct: 204 VLRSK-QPLMSPAWSPDGQKLAYVSFQNGQAEIFIMNIYTGEQEKVTSYPRHNG------ 256

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            APRFS +G    + + K  ++ +Y++DL++    ++T     N    + PD   ++F S
Sbjct: 257 -APRFSPDGNTLALVLSKTGSLQVYTLDLKTRKLTQITRGRSNNTEPYWHPDGKSLIFTS 315

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           DR G+ Q+Y +Q    + KR++     +    + +P G  +     S   F +     + 
Sbjct: 316 DRGGRPQIYQVQLANGETKRLTWQGSQNLGGQI-TPDGRFLVMVNRSNSGFNLAKQDLET 374

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASD 439
              ++L +    ++P+ +P+G  +I+S   +      + SID  GR    L  T      
Sbjct: 375 GAVQILTKTLLDESPSIAPNGGMVIYSSIYNKTNVLSMVSID--GRFKARLPATNGRVRA 432

Query: 440 PQWVGFM 446
           P W  F+
Sbjct: 433 PAWSPFL 439


>gi|300722397|ref|YP_003711683.1| hypothetical protein XNC1_1420 [Xenorhabdus nematophila ATCC 19061]
 gi|297628900|emb|CBJ89483.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Xenorhabdus nematophila
           ATCC 19061]
          Length = 439

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 200/426 (46%), Gaps = 26/426 (6%)

Query: 33  HAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
           HA V++       +  P+ +   K+  + E+   +  +++ DL+ S  FN I      Q+
Sbjct: 28  HAEVRIEITQGVDSARPIGVVPFKWTGVGEVPENIGSIIAADLRNSGKFNPIDPTRMPQQ 87

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSPA 149
            T    +     W++LG   +V G +      +  V ++L D       ++ +  FS   
Sbjct: 88  PTTASEVTP-AAWSALGIDSVVVGHIQPSADGKFLVSYQLVDTAGAPGTVLAQDQFSIER 146

Query: 150 SWRKI-AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
            W ++ AHT+SD +++ +TG KG F +RI ++ ++         L V D DG N + +  
Sbjct: 147 KWLRLSAHTVSDQVFEKLTGIKGAFRTRIAYIVKNTNGAKFPYELRVSDYDGYN-QSMVH 205

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + L  P +SP+  K+AY T++        ++ T      + + +F     AP FS +
Sbjct: 206 RSPEPLMSPAWSPDASKLAYVTFEGGS--SSLVIQTLATGTKREVASFPRHNGAPAFSPD 263

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G +   ++ K  ++++Y +DL SN   ++T+    N   S+ PD+  +V+ SD+ G+ QL
Sbjct: 264 GTKLAFALSKTGSLNLYVMDLASNQIRQVTDGRSNNTEPSWMPDNQTLVYTSDQGGRPQL 323

Query: 329 YVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQE 383
           Y +  NG   +R+    SQ+++A       SP G  +   +  SG +    + K+D +  
Sbjct: 324 YKIDINGGAPERLTWEGSQNQDADV-----SPDGSFVVMVSSASGSQH---IAKQDLATG 375

Query: 384 RL-LVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDP 440
            + ++ D+ L + P+ +P+G  +I+S  +   T  +L S D  GR    L  T      P
Sbjct: 376 SVQILTDTFLDETPSIAPNGTMVIYSSTQGWGTILQLVSTD--GRFKARLPATDGQVKSP 433

Query: 441 QWVGFM 446
            W  ++
Sbjct: 434 AWSPYL 439


>gi|262276103|ref|ZP_06053912.1| TolB protein precursor [Grimontia hollisae CIP 101886]
 gi|262219911|gb|EEY71227.1| TolB protein precursor [Grimontia hollisae CIP 101886]
          Length = 450

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 186/424 (43%), Gaps = 73/424 (17%)

Query: 41  NSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF 100
           NSA   P++I   K+    +L   VS VV+ DLQRS  F+ I  D   Q   N D+   F
Sbjct: 33  NSAR--PIAIVPFKWEGEGKLPTDVSAVVASDLQRSGKFSPIPTDKMPQTPYN-DTEVDF 89

Query: 101 QDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS---------- 150
            DW ++G   LVTG V      + ++E++L D+  R Q+ G +     AS          
Sbjct: 90  NDWTAIGVDALVTGTVKPAAGGKYQIEYQLIDIV-RGQLTGGQSKGLSASGELVITKDHL 148

Query: 151 ------------WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
                        RK+AH I+D IY+ +TGEKG F +RI +V     S      L + D 
Sbjct: 149 LIHSRHTVGQEALRKLAHLIADRIYEKLTGEKGAFLTRIAYVVIDEKSDH-PYQLRISDY 207

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG N  +   S  Q L  P +SP+ +++AY ++++    +++L +       + I +F  
Sbjct: 208 DGYN-EHRVLSSTQPLMSPSWSPDGKQLAYVSFENGQA-QIFLTNIYTGER-QMISSFPR 264

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
              +PRFS +G +  + + K  ++ IY +DL +   E++T     N    ++PD   ++F
Sbjct: 265 HNGSPRFSPDGSKLAMVLSKTGSLQIYVMDLNTRQLEQITKGRANNTEPFWAPDGQSLIF 324

Query: 319 ESDREGKEQLYVMQSNGSDQKRIS--------------------------------QDKE 346
            SDR GK Q+Y +  +     RI+                                QD +
Sbjct: 325 TSDRGGKPQIYRVNLSDGSTNRITWQGSQNLGGQLTPDGRYLVMVHRSDSGYNIAKQDLQ 384

Query: 347 ASYFD----------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAP 395
               +          P  +P G ++ ++   G    + ++  DG  + RL   +  ++AP
Sbjct: 385 TGAVEILTKTMLDESPSLAPNGSMVIYSSVYGRSNVLSMVSIDGRFKARLPATNGRVRAP 444

Query: 396 TWSP 399
            WSP
Sbjct: 445 AWSP 448


>gi|114562639|ref|YP_750152.1| TolB domain-containing protein [Shewanella frigidimarina NCIMB 400]
 gi|122941016|sp|Q084K1|TOLB_SHEFN RecName: Full=Protein tolB; Flags: Precursor
 gi|114333932|gb|ABI71314.1| TolB, N-terminal domain protein [Shewanella frigidimarina NCIMB
           400]
          Length = 442

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 197/432 (45%), Gaps = 34/432 (7%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVSKDL 73
           NL   L L+     T   A + +       +   IA   FV          +S+VV+ DL
Sbjct: 3   NLAKWLTLVLIVLTTPARAALDIVITEGVDAARPIAVVPFVWQGQGPAPASISDVVASDL 62

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  F  +   +  Q   +  +    Q+W ++ A+ LV G V   G D+  V F L D+
Sbjct: 63  SRSGTFKTLDVRALPQSTISSVNGFTAQNWANVEAEALVVGTVKPYGADQYLVSFELIDL 122

Query: 134 KDRKQIIGK-------------KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
              +   GK             +   S   +R+ +H ISD +Y+ +TG +G F +RI +V
Sbjct: 123 VKAQLQAGKGPQNNNELLLESRETVISANQFRQYSHRISDIVYEKLTGIRGAFLTRIAYV 182

Query: 181 SESVVSGIIKNS------LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                  ++K        L + D DG N + L  S +  L  P +SP+ +++AY ++++ 
Sbjct: 183 -------VVKQGQKAPYHLMIADYDGYNEQMLLRSPEP-LMSPTWSPDGRRLAYVSFENR 234

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               +++ D    +    + +F  +  AP FS +GK+  +++ KD   +IY VD+ + AT
Sbjct: 235 KA-EIFVQDI-YSQTRTLVSSFDGINGAPAFSPDGKKLAVTLSKDGQPEIYVVDIATKAT 292

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            R+T    I+   S+ PD   I+F S+R GK QLY +  + +   R++ + E +    + 
Sbjct: 293 RRITEHYAIDTEPSWFPDGKSILFTSERGGKPQLYRVSLDTNKVSRMTFEGEWNLGGSI- 351

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           SP G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+     G  
Sbjct: 352 SPDGRSMIFVNRTNGKFHIARMDLATRFMQVLSSTQLDESPSVAPNGTMVIYGTTHQGK- 410

Query: 415 GSKLYSIDLNGR 426
              L ++ ++GR
Sbjct: 411 -QVLAAVSMDGR 421


>gi|56460188|ref|YP_155469.1| translocation protein TolB [Idiomarina loihiensis L2TR]
 gi|67461918|sp|Q5QYU0|TOLB_IDILO RecName: Full=Protein tolB; Flags: Precursor
 gi|56179198|gb|AAV81920.1| Periplasmic component of the Tol biopolymer transport system
           [Idiomarina loihiensis L2TR]
          Length = 449

 Score =  131 bits (329), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 115/457 (25%), Positives = 210/457 (45%), Gaps = 32/457 (7%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           N+ I   LL V +  F    +   V +        P+++   ++    +   ++++V++ 
Sbjct: 3   NILIRSILLFVALTAFVRAGVLEIV-ITEGIDTARPIAVVPFQWKGEGKAPNELTDVIAA 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  FN I   +  Q+    D I  +  W  +G + ++ G +     DR  V+F + 
Sbjct: 62  DLMRSGKFNPIPVSAMPQRPAADDEI-DYSAWAKMGVEAILVGSIEPYSVDRYMVKFEVI 120

Query: 132 DVKDRKQIIGK---------------KFFSSPAS------WRKIAHTISDDIYQSITGEK 170
           DV  R QI G                    S +S      +R  AH ISD  Y+++TGE+
Sbjct: 121 DVL-RGQITGGNSQMLRNGELVQSNDHVLDSRSSVIDGDQFRSYAHRISDVAYEALTGER 179

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F ++I +V+ +         L V D DGAN + L  S +  L  P +SP+  K+AY +
Sbjct: 180 GAFMTKIAYVTVNH-DDRYPYKLAVADYDGANEKILLRSPEP-LMSPAWSPDGNKLAYVS 237

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           ++++    +++ D    R  +++ +F  +   P FS +GK+  + + KD   ++Y  D++
Sbjct: 238 FENK-TAEIFMQDIYTTRR-EKLTSFPGINGNPVFSPDGKKLAMVLSKDGNPELYVFDIK 295

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +   +R+T    I+   +++PD   +VF S+R G+ QLY +  +    +R++ D E +  
Sbjct: 296 TKDLQRVTRNRTIDTEPNWTPDGESLVFTSERGGRPQLYSVNLSSGQVRRLTFDGEQNLG 355

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
             +     D+I   +  G  + I   +      ++L + S  ++P+ +P+G  +I+S   
Sbjct: 356 GTLVPSGEDMILVNRTRG-NYHIAKQEFPRGNMQVLTKTSLDESPSVAPNGSMVIYSTTH 414

Query: 411 DGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           +      L SID  GR    L  T      P W  FM
Sbjct: 415 NNKQVLALVSID--GRFKARLPATDGEIKSPAWSPFM 449


>gi|90022174|ref|YP_528001.1| translocation protein TolB [Saccharophagus degradans 2-40]
 gi|119371059|sp|Q21HP0|TOLB_SACD2 RecName: Full=Protein tolB; Flags: Precursor
 gi|89951774|gb|ABD81789.1| TolB-like protein [Saccharophagus degradans 2-40]
          Length = 445

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 199/416 (47%), Gaps = 28/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L+L+L  G     +   +++   + N  P  IA   F     L   VS ++S DL RS
Sbjct: 24  LSLMLILAAGMARAEL--VIEITQGADN--PTPIAVVPFGGNGGLSENVSRIISADLDRS 79

Query: 77  DVF------NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            +F      N++S  S +  I        ++DW  LG   LV G  I+  +     E+ L
Sbjct: 80  GLFESKSPENMLSFPSKQADIF-------YRDWRILGTDYLVIGD-IQRSESGYVAEYGL 131

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +DV  +K+++GK     P   R +AH ISDD+YQ++TG +G F+++IL++ +   S   +
Sbjct: 132 YDVLQQKKMLGKVLSVGPTGLRDMAHKISDDVYQALTGIRGAFSTKILYIEDMGPSVKER 191

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--DILRVYLMDTRIDR 248
             L   D DGA  + +  S + +L  P +S +  +VAY +++     I R  L+  + + 
Sbjct: 192 YRLIKADADGAREQLIFKSSEPLL-SPAWSNDLTQVAYVSFETSRPAIFRHNLITGKRE- 249

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINIS 306
              ++ NF+ +  AP +S +  +  + + KD   +IY +D+ + A +R+T T    I+  
Sbjct: 250 ---QLTNFKGLNGAPAWSPDDSKLALVLSKDGNPEIYILDIATRALQRVTKTHSAVIDTE 306

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +++ D   I+F S+R G  Q+Y +       +R++ + + +   P  +P G  +     
Sbjct: 307 PNWTADGKGIIFTSNRGGNPQIYQVGLATGRVERLTFEGDYNA-RPRVTPDGKSLVMVHR 365

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               F I          R+L E    ++P+ +P+G  L+++ + +        SID
Sbjct: 366 EDGVFHIAWQDIQSGDMRILTETWLDESPSIAPNGAMLLYATQHNNKGVLAAVSID 421


>gi|261252510|ref|ZP_05945083.1| TolB protein precursor [Vibrio orientalis CIP 102891]
 gi|260935901|gb|EEX91890.1| TolB protein precursor [Vibrio orientalis CIP 102891]
          Length = 438

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 204/449 (45%), Gaps = 45/449 (10%)

Query: 28  FPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDS 86
           F T+  A   V T+  + + P++I   K+    +L   VS+V++ DLQRS  F+ I+   
Sbjct: 5   FQTANAALELVITDGIDSARPIAIVPFKWEGNSQLPEDVSKVIASDLQRSGKFSPIATSK 64

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV------------- 133
             Q   N   +  F  W  LG   LVTG + +  +    + ++L DV             
Sbjct: 65  MPQTPYNETEV-DFGAWTGLGVDALVTGSISQNAEGNYVINYQLVDVVRGQLTQGQSKAL 123

Query: 134 KDRKQIIGKK---FFSSPAS-----WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
            D  Q++  K    F+  A+      R+ AH ISD +Y+++TGEKG F +RI +V   VV
Sbjct: 124 SDDGQLVLSKDHVMFNKRATVPGDRLREYAHRISDLVYEALTGEKGAFLTRIAYV---VV 180

Query: 186 SGI--IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED----ILRV 239
           S        L V D DG N R +  S+ Q L  P +SP+ +K+AY ++ +      I+ +
Sbjct: 181 SDKDQFPYQLRVSDYDGHNERLVLRSK-QPLMSPAWSPDGKKLAYVSFQNGQAEIFIMNI 239

Query: 240 YLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           Y  +  +I   P+  G       APRFS +G +  + + K  ++ +Y++DL++    ++T
Sbjct: 240 YTGEREKISSYPRHNG-------APRFSPDGSKLALVLSKTGSLQVYTLDLKTRKLTQIT 292

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                N    + PD   +VF SDR GK Q+Y +        RI+     +    + +P G
Sbjct: 293 RGRSNNTEPFWHPDGKSLVFTSDRGGKPQIYQVDLANGSTSRITWQGSQNLGGQI-TPDG 351

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +     S   F +  +  +    + L +    ++P+ +P+G  +I+S   +      +
Sbjct: 352 RFLVMVNRSNSGFNLAKLDLETGAMQTLTKTLLDESPSIAPNGGMVIYSSTYNKSNVLSM 411

Query: 419 YSIDLNGR-NETLINTPAYASDPQWVGFM 446
            SID  GR    L  T      P W  F+
Sbjct: 412 VSID--GRFKARLPVTNGRVRAPAWSPFL 438


>gi|90408530|ref|ZP_01216687.1| TolB protein [Psychromonas sp. CNPT3]
 gi|90310349|gb|EAS38477.1| TolB protein [Psychromonas sp. CNPT3]
          Length = 437

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/436 (24%), Positives = 211/436 (48%), Gaps = 30/436 (6%)

Query: 30  TSIHAFVKV------ATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLIS 83
            S  AF ++        NSA   P+++   K++   E    ++ ++  DL+ S VF  I+
Sbjct: 14  CSTQAFARLDILITEGVNSAR--PIAVIPFKWLGTGEKPQDIARIIGNDLRSSGVFRPIA 71

Query: 84  QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK-DRLRVEFRLWDV-------KD 135
            D      +  +++  +  W+ +G + +V G +    +  +  + + L +V       K 
Sbjct: 72  IDKMPSTPSRSETL-DYALWHKMGVEAIVMGEIKPASEPGKYTITYELLNVLTGNMSIKG 130

Query: 136 RKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
              ++ K+  + S   +R  AH ISD +Y+ +TGE+G F +RI +++    S      L 
Sbjct: 131 LSPVLEKRRSTLSATQFRHFAHRISDVVYEKLTGERGAFLTRIAYIAVDHRSSH-PYQLR 189

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D DG   + +  S+  I+  P +SP+ +K+ Y +++ +   ++Y+ D    +  + + 
Sbjct: 190 IADYDGYAEKLILRSKQPIM-SPAWSPDGRKLVYVSFEKKKS-QIYIQDIYTQKR-ELMT 246

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  AP +S +GK     + KD   +IY++++ S A +R+T    I+   S+SPD  
Sbjct: 247 SFPRINGAPSWSPDGKMLSFVLSKDGQAEIYTMNVMSKALKRITQNRVIDTEPSWSPDGK 306

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            ++F S+R G+ Q+Y +  +    KR++ + + +    + +P GD +     S  ++ I 
Sbjct: 307 SLLFTSERGGRPQIYQVDLSSMQTKRMTWEGDMNLGGTI-TPDGDSLVLVSRSNGQYKIS 365

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           V      + R L +    ++P+ +P+G  +I+S    G  G  L S+D  GR +   N P
Sbjct: 366 VQDIASGELRTLTKTQLDESPSVAPNGSMIIYSTVYQGHKGLALVSMD--GRFKA--NIP 421

Query: 435 AYASD---PQWVGFMD 447
           A   D   P W  F++
Sbjct: 422 AINGDVKSPAWSPFLN 437


>gi|326423958|ref|NP_761028.2| Tol-Pal system beta propeller repeat-containing protein TolB
           [Vibrio vulnificus CMCP6]
 gi|319999336|gb|AAO10555.2| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           vulnificus CMCP6]
          Length = 449

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 197/428 (46%), Gaps = 43/428 (10%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P++I   K+     L   +S VV+ DLQRS  F+ +      Q   N   I  F  W +L
Sbjct: 37  PIAIVPFKWQGTKALPVDISSVVASDLQRSGKFSPVPTSKMPQTPYNESEI-NFDAWTNL 95

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDV-------------KDRKQIIGKK--FFSSPAS- 150
           G   L+TG V +  K    + ++L DV             +D + ++ K    F+  A+ 
Sbjct: 96  GVDTLLTGSVTQNEKGEYVINYQLVDVVRGQLTSGQSRALEDGQLVLSKDHVLFNKVATI 155

Query: 151 ----WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK--NSLCVMDRDGANIR 204
                R+ AH ISD IY+ +TGE+G F +RI +V   VV+   K    L V D DG N R
Sbjct: 156 TAPRMREYAHRISDLIYEQLTGERGAFLTRIAYV---VVNDKDKFPYQLRVADYDGFNER 212

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDED----ILRVYLMDTRIDRAPKRIGNFRSMI 260
            +  S+ Q L  P +SP+ +++AY ++ +      +L +Y  +       +++ +F    
Sbjct: 213 LVLRSK-QPLMSPAWSPDGRRLAYVSFQNGQAEIFVLNIYTGEH------EKLTSFPRHN 265

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            APRFS +GK+  I + K  ++ IY++DLQ+    ++T     N    + PD   ++F S
Sbjct: 266 GAPRFSPDGKKLAIVLSKTGSLQIYTLDLQTRQLTQITRDRSNNTEPFWHPDGKSLIFTS 325

Query: 321 DREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           DR GK Q+Y V  S+GS  +   Q  +        +P G  +     S   F +     +
Sbjct: 326 DRGGKPQIYRVNLSDGSTSRLTWQGSQN--LGGQITPDGRFLIMVNRSDSGFNLAKQDLE 383

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYAS 438
               ++L +    ++P+ +P+G  +I+S   D      + SID  GR    L  T     
Sbjct: 384 TGAVQVLTKTLLDESPSIAPNGGMVIYSSIYDKKNVLSMVSID--GRFKARLPATNGRVR 441

Query: 439 DPQWVGFM 446
            P W  F+
Sbjct: 442 APAWSPFL 449


>gi|260768866|ref|ZP_05877800.1| TolB protein precursor [Vibrio furnissii CIP 102972]
 gi|260616896|gb|EEX42081.1| TolB protein precursor [Vibrio furnissii CIP 102972]
          Length = 450

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 207/454 (45%), Gaps = 37/454 (8%)

Query: 18  CLLLVLIG-GFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           CLL+V     F   ++   +    NSA   P++I   K+    +L   VS V++ DLQRS
Sbjct: 9   CLLVVSSSVQFANAALELVITDGINSAR--PIAIVPFKWEGKTKLPQDVSGVIASDLQRS 66

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV--- 133
             F+ I      Q   N   + +F  W S+G   L+TG + +       + ++L DV   
Sbjct: 67  GKFSPIPTSKMPQTPYNEADV-KFDAWTSIGVDALLTGSITQNADGNYVINYQLVDVVRG 125

Query: 134 -----------KDRKQIIGK------KFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNS 175
                       D + ++ K      K  + PA   R+ AH I+D +Y+ +TGE+G F +
Sbjct: 126 QLTQGQSRALSSDGQLVLSKDHVLFNKVATVPAKRMREYAHRIADLVYEELTGERGAFLT 185

Query: 176 RILFVSESVVSG--IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           RI +V   VV+        L V D DG N R +  S+ Q L  P +SP+ +K+AY ++ +
Sbjct: 186 RIAYV---VVNDKDAYPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGKKLAYVSFQN 241

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                +Y+M+       +++ ++     APRFS +GK   + + K  ++ +Y++DL S  
Sbjct: 242 GQA-EIYIMNIYTGER-EKVTSYPRHNGAPRFSPDGKTLALVLSKTGSLQVYTLDLTSRK 299

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             ++T+    N    ++PD   ++F SDR GK Q+Y +       KR++     +    +
Sbjct: 300 LTQITSGRSNNTEPFWNPDGKSLIFTSDRGGKPQIYQVNLTDGATKRLTWQGSQNLGGQI 359

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S   +  
Sbjct: 360 -TPDGRFLVMVNRSNSGFNLAKQDLETGSVQILTKTLLDESPSIAPNGGMVIYSSIYNKA 418

Query: 414 TGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
               + SID  GR    L  T      P W  F+
Sbjct: 419 NVLSMVSID--GRFKARLPATNGRVRAPAWSPFL 450


>gi|153832465|ref|ZP_01985132.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio harveyi
           HY01]
 gi|148871260|gb|EDL70132.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio harveyi
           HY01]
          Length = 450

 Score =  130 bits (328), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 120/461 (26%), Positives = 205/461 (44%), Gaps = 47/461 (10%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
           L  + VL+G     +  A   V T+  + + P+++   K+   + L   +S V++ DLQR
Sbjct: 6   LLGMFVLLGSLTSVAHAALELVITDGIDSARPIAVVPFKWEGSEPLPTDISAVIASDLQR 65

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  F+ +      Q   N   +  F  W  LG   L+TG + K  +    V ++L DV  
Sbjct: 66  SGKFSPVPTSKMPQTPFNESEV-NFDAWTGLGVDALLTGSIKKNEQGNYVVNYQLVDVV- 123

Query: 136 RKQIIGKK-----------------FFSSPAS-----WRKIAHTISDDIYQSITGEKGDF 173
           R Q+ G K                  F+  A+      R+ AH ISD +Y+ +TGE+G F
Sbjct: 124 RGQLTGGKSKALGGDGELVLSKDHVLFNKVATVEGPRMREYAHRISDLVYEQLTGERGAF 183

Query: 174 NSRILFVSESVVSGI--IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +RI +V   VV+        L V D DG N R +  S+ Q L  P +SP+ QK+AY ++
Sbjct: 184 MTRIAYV---VVNDKDNFPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGQKLAYVSF 239

Query: 232 DDED----ILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +      I+ +Y  +  +I   P+  G       APRFS +G +  + + K  ++ +Y+
Sbjct: 240 QNGQAEIFIMNIYTGEREKITSYPRHNG-------APRFSPDGSQLALVLSKTGSLQVYT 292

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +DL++    ++T     N    + PD   ++F SDR GK Q+Y +        R++    
Sbjct: 293 LDLKTRKLTQITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVDLGSGSTNRLTWQGS 352

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +    + +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+
Sbjct: 353 QNLGGQI-TPDGRFLVMVNRSDSGFNLAKQDLETGALQVLTKTLLDESPSIAPNGGMVIY 411

Query: 407 SRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           S   +      + SID  GR    L  T      P W  F+
Sbjct: 412 SSIYNKKNVLSMVSID--GRFKARLPATNGRVRAPAWSPFL 450


>gi|94311607|ref|YP_584817.1| translocation protein TolB [Cupriavidus metallidurans CH34]
 gi|119371053|sp|Q1LJX8|TOLB_RALME RecName: Full=Protein tolB; Flags: Precursor
 gi|93355459|gb|ABF09548.1| periplasmic protein [Cupriavidus metallidurans CH34]
          Length = 446

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 172/351 (49%), Gaps = 21/351 (5%)

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI 162
           W + GA   V G V      +  V FRL+D    + + G  F  +    R  AH I+D I
Sbjct: 109 WKAKGADAFVAGSVTPTSNGQYEVRFRLYDTAKGQSLGGLAFTVTQGQLRVTAHKIADYI 168

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           Y+ + GE+G F +R+ +VS+      + N   L + D DG N +    S + I+  P +S
Sbjct: 169 YEKLLGERGVFATRLSYVSK------VGNRYQLLISDSDGQNAQIALTSTEPII-SPAWS 221

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKRALISVQK 278
           P+ ++VAY +++ +  + VY+ D       KR+   N +    AP +S +G+   +S+ +
Sbjct: 222 PDGRRVAYVSFEAKKPV-VYVHDLATG---KRVVVSNQKGNNSAPSWSPDGQHLAVSLSR 277

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D    IY V+   +   RLT +  I+    +SPD   I F SDR G  Q+Y M ++G + 
Sbjct: 278 DGNTQIYQVNADGSGLRRLTRSSAIDTEPQFSPDGRSIYFTSDRGGAPQIYRMPASGEES 337

Query: 339 KRISQDK-EASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               +   + SY   P  SP G  +A+   SG  F + +          L + +N ++P+
Sbjct: 338 GAAQRVTFKGSYNVSPRISPDGKYLAYISRSG-GFRLQLQDLSNGDVTSLTDTTNDESPS 396

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQWVGFM 446
           ++ +G+ ++++ +  G   S L ++  +GR + +++  + A  +P W  FM
Sbjct: 397 FAANGKYILYATRVGGR--SVLAAVSTDGRTKQVLSLQSGAVREPSWGPFM 445


>gi|327393166|dbj|BAK10588.1| protein TolB precursor [Pantoea ananatis AJ13355]
          Length = 431

 Score =  130 bits (328), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 198/420 (47%), Gaps = 20/420 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +++ L   ++L        +   +    NSA   P+ +   K+         +  +V+ D
Sbjct: 5   LRVTLGFFILLWAAVLHAEVRIEITQGVNSAR--PIGVVPFKWAGPGAAPEDIGGIVAAD 62

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN + +    Q+ T+   + +   W++LG   +V G++        +V ++L D
Sbjct: 63  LRNSGKFNPLDRSRLPQQPTSAQEV-QPAAWSALGIDAVVVGQIQPNADGSYQVSYQLVD 121

Query: 133 VKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
                  ++ +  +     W R  AHT+SD+ +Q +TG KG F +RI +V ++   G   
Sbjct: 122 TAGAPGTVLAQNSYKITKQWLRYAAHTVSDEAFQKLTGIKGAFRTRIAYVVQTN-GGQFP 180

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L V D DG N +++     Q L  P +SP+  KVAY T+  E      ++ T  + A 
Sbjct: 181 YELRVADYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTF--ESGKSALVIQTLSNGAV 237

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+  + +   ++ 
Sbjct: 238 RQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRYNSTEPTWF 297

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PDS  + + SD+ G  Q+Y +  NG   +RI+ +   +    V S    ++  +   G +
Sbjct: 298 PDSQTLAYTSDQAGAPQIYKIGINGGSPQRITWEGAQNQDADVASDGKSMVMISTSGGAQ 357

Query: 371 FAIGVMKKD---GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               V K+D   G+ + L   D+ L + P+ +P+G  +I+S  +    GS L  +  +GR
Sbjct: 358 H---VAKQDLVTGAVQTL--TDTFLDETPSLAPNGTMVIYSSTQ--GMGSVLQLVSTDGR 410


>gi|37680459|ref|NP_935068.1| translocation protein TolB [Vibrio vulnificus YJ016]
 gi|320155882|ref|YP_004188261.1| TolB protein , periplasmic protein involved in the tonb-independent
           uptake of group A colicins [Vibrio vulnificus MO6-24/O]
 gi|67461993|sp|Q7MJ87|TOLB_VIBVY RecName: Full=Protein tolB; Flags: Precursor
 gi|37199207|dbj|BAC95039.1| tol biopolymer transport system periplasmic component, TolB [Vibrio
           vulnificus YJ016]
 gi|319931194|gb|ADV86058.1| TolB protein precursor, periplasmic protein involved in the
           tonb-independent uptake of group A colicins [Vibrio
           vulnificus MO6-24/O]
          Length = 449

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 197/428 (46%), Gaps = 43/428 (10%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P++I   K+     L   +S VV+ DLQRS  F+ +      Q   N   I  F  W +L
Sbjct: 37  PIAIVPFKWQGTKALPVDISSVVASDLQRSGKFSPVPTSKMPQTPYNESEI-NFDAWTNL 95

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDV-------------KDRKQIIGKK--FFSSPAS- 150
           G   L+TG V +  K    + ++L DV             +D + ++ K    F+  A+ 
Sbjct: 96  GVDTLLTGSVTQNEKGEYVINYQLVDVVRGQLTSGQSRALEDGQLVLSKDHVLFNKVATI 155

Query: 151 ----WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK--NSLCVMDRDGANIR 204
                R+ AH ISD IY+ +TGE+G F +RI +V   VV+   K    L V D DG N R
Sbjct: 156 TAPRMREYAHRISDLIYEQLTGERGAFLTRIAYV---VVNDKDKFPYQLRVADYDGFNER 212

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDED----ILRVYLMDTRIDRAPKRIGNFRSMI 260
            +  S+ Q L  P +SP+ +++AY ++ +      +L +Y  +       +++ +F    
Sbjct: 213 LVLRSK-QPLMSPAWSPDGRQLAYVSFQNGQAEIFVLNIYTGEH------EKLTSFPRHN 265

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            APRFS +GK+  I + K  ++ IY++DLQ+    ++T     N    + PD   ++F S
Sbjct: 266 GAPRFSPDGKKLAIVLSKTGSLQIYTLDLQTRQLTQITRDRSNNTEPFWHPDGKSLIFTS 325

Query: 321 DREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           DR GK Q+Y V  S+GS  +   Q  +        +P G  +     S   F +     +
Sbjct: 326 DRGGKPQIYRVNLSDGSTSRLTWQGSQN--LGGQITPDGRFLIMVNRSDSGFNLAKQDLE 383

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYAS 438
               ++L +    ++P+ +P+G  +I+S   D      + SID  GR    L  T     
Sbjct: 384 TGAVQVLTKTLLDESPSIAPNGGMVIYSSIYDKKNVLSMVSID--GRFKARLPATNGRVR 441

Query: 439 DPQWVGFM 446
            P W  F+
Sbjct: 442 APAWSPFL 449


>gi|54294385|ref|YP_126800.1| TolB protein [Legionella pneumophila str. Lens]
 gi|67461924|sp|Q5WWJ9|TOLB_LEGPL RecName: Full=Protein tolB; Flags: Precursor
 gi|53754217|emb|CAH15694.1| TolB protein [Legionella pneumophila str. Lens]
 gi|307610269|emb|CBW99833.1| TolB protein [Legionella pneumophila 130b]
          Length = 419

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 205/445 (46%), Gaps = 37/445 (8%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            N  I+L LLL      F   + A     T   N S + IA   F S D    ++  V+ 
Sbjct: 2   FNRIISLFLLL------FTGQVIALDLELTQGIN-SALPIAINSFGS-DAAAQEIGNVIE 53

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL  S  F +IS     Q   +  S+   +    LGA  +VTGRV + G +R+ V F L
Sbjct: 54  NDLTISGQFKIISG---PQGANSQSSVSTLRQ---LGADSVVTGRVNQVG-NRIEVSFTL 106

Query: 131 WDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            D      I+  K F   A+  R +AH ISD++YQ +TGE+G F++RI ++S     G  
Sbjct: 107 ADAVANGNILLTKTFQINANQVRALAHHISDEVYQKLTGERGIFSTRIAYISVQRAGGRS 166

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + SL V D DG N + L  S + I+  P +SPN + ++Y +++ +   +  +    ++  
Sbjct: 167 RYSLEVADADGHNPQSLLVSSEPIM-SPSWSPNGKSISYVSFEKK---KAEIFTVSVETG 222

Query: 250 PKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            +R I +F  +  AP +S +G+   + + K     IY VDL S + ++LT    I+    
Sbjct: 223 QRRLITSFPGINGAPAWSPDGQHLAVVLSKSGTPKIYDVDLSSGSMKQLTFGNSIDTEPR 282

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGDLIAFT 364
           YSPD   ++F S R G  Q+Y +        R++     +  ASY     +P    I   
Sbjct: 283 YSPDGRSLLFTSGRGGSPQVYRLSLADGQISRVTFEGNYNARASY-----TPDMKHIVML 337

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                +F IGV    G     L      ++P+ SP+ R ++++ +   D G  L  + ++
Sbjct: 338 HREDRQFNIGVQNTGGGPISNLTFSGLDESPSVSPNSRLVLYATRYQ-DRG-VLGIVSID 395

Query: 425 GRNETLINTPAYASD---PQWVGFM 446
           GR    +  PA   D   P W  ++
Sbjct: 396 GR--IRMRLPAREGDVQEPAWSPYL 418


>gi|291616740|ref|YP_003519482.1| TolB [Pantoea ananatis LMG 20103]
 gi|291151770|gb|ADD76354.1| TolB [Pantoea ananatis LMG 20103]
          Length = 453

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 198/420 (47%), Gaps = 20/420 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +++ L   ++L        +   +    NSA   P+ +   K+         +  +V+ D
Sbjct: 27  LRVTLGFFILLWAAVLHAEVRIEITQGVNSAR--PIGVVPFKWAGPGAAPEDIGGIVAAD 84

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN + +    Q+ T+   + +   W++LG   +V G++        +V ++L D
Sbjct: 85  LRNSGKFNPLDRSRLPQQPTSAQEV-QPAAWSALGIDAVVVGQIQPNADGSYQVSYQLVD 143

Query: 133 VKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
                  ++ +  +     W R  AHT+SD+ +Q +TG KG F +RI +V ++   G   
Sbjct: 144 TAGAPGTVLAQNSYKITKQWLRYAAHTVSDEAFQKLTGIKGAFRTRIAYVVQTN-GGQFP 202

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L V D DG N +++     Q L  P +SP+  KVAY T+  E      ++ T  + A 
Sbjct: 203 YELRVADYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTF--ESGKSALVIQTLSNGAV 259

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+  + +   ++ 
Sbjct: 260 RQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRYNSTEPTWF 319

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PDS  + + SD+ G  Q+Y +  NG   +RI+ +   +    V S    ++  +   G +
Sbjct: 320 PDSQTLAYTSDQAGAPQIYKIGINGGSPQRITWEGAQNQDADVASDGKSMVMISTSGGAQ 379

Query: 371 FAIGVMKKD---GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               V K+D   G+ + L   D+ L + P+ +P+G  +I+S  +    GS L  +  +GR
Sbjct: 380 H---VAKQDLVTGAVQTL--TDTFLDETPSLAPNGTMVIYSSTQ--GMGSVLQLVSTDGR 432


>gi|304395719|ref|ZP_07377602.1| Tol-Pal system beta propeller repeat protein TolB [Pantoea sp. aB]
 gi|304357013|gb|EFM21377.1| Tol-Pal system beta propeller repeat protein TolB [Pantoea sp. aB]
          Length = 431

 Score =  130 bits (327), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 189/432 (43%), Gaps = 52/432 (12%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +++ L   ++L        +   +    N+A   P+ +   K+         V  +V+ D
Sbjct: 5   LRVTLGFFILLWAAMLHAEVRIEITQGVNTAR--PIGVVPFKWAGSGAAPEDVGGIVAAD 62

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN + +    Q+ T+   + +   W++LG   +V G+V        +V ++L D
Sbjct: 63  LRNSGKFNPLDRSRLPQQPTSAQEV-QPAAWSALGIDAVVVGQVASNPDGSYQVSYQLVD 121

Query: 133 VKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
                  ++ +  +     W R  AHT SD+ +Q +TG KG F +RI +V ++   G   
Sbjct: 122 TGGAPGTVLAQNSYKVTKQWLRYAAHTASDETFQKLTGIKGAFRTRIAYVVQTN-GGQFP 180

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L V D DG N +++     Q L  P +SP+  KVAY T+  E      ++ T  + A 
Sbjct: 181 YELRVADYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTF--ESGKSALVVQTLSNGAI 237

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +++ ++     AP FS +G +   ++ K  ++++Y +DL S  T ++T+  + +   ++ 
Sbjct: 238 RQVASYPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQTRQVTDGRYNSTEPTWF 297

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------------------------- 342
           PDS  + + SD+ G  Q+Y +  NG   +RI+                            
Sbjct: 298 PDSQTLAYTSDQAGAPQIYKVGINGGTPQRITWEGGQNQDADVATDGKSMVMISTNGGAQ 357

Query: 343 ----QDKEA--------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLV 387
               QD E         ++ D  P  +P G ++ ++   G    + ++  DG  + RL  
Sbjct: 358 HVAKQDLETGAVQTLTDTFLDETPSLAPNGTMVIYSSTQGMGSVLQLVSTDGRFKARLPA 417

Query: 388 EDSNLQAPTWSP 399
            D  ++ P WSP
Sbjct: 418 TDGQVKFPAWSP 429


>gi|329295948|ref|ZP_08253284.1| translocation protein TolB [Plautia stali symbiont]
          Length = 431

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/439 (23%), Positives = 203/439 (46%), Gaps = 17/439 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +++ L   ++L        +   +    N+A   P+ +   ++         +  +V+ D
Sbjct: 5   LRVTLGFFVLLWAAMLHAEVRIEITQGVNTAR--PIGVVPFQWAGPGAAPEDIGGIVAAD 62

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN + +    Q+ T+   + +   W++LG   +V G+V        +V ++L D
Sbjct: 63  LRNSGKFNPLDRSRLPQQPTSAQEV-QPAAWSALGIDAVVVGQVTPNADGSYQVAYQLVD 121

Query: 133 VKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
                  ++ +  +     W R  AHT SD++++ +TG KG F +RI +V ++   G   
Sbjct: 122 TGGAPGTVLAQNSYKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFP 180

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L V D DG N +++     Q L  P +SP+  KVAY T+  E      ++ T  + A 
Sbjct: 181 YELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTF--ESGKSALVVQTLANGAI 237

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +++ ++     AP FS +G +   ++ K  ++++Y +DL S  T ++T+  + +   ++ 
Sbjct: 238 RQVASYPRHNGAPAFSPDGSKLAFALSKTGSLNLYVIDLASGQTRQVTDGRYNSTEPTWF 297

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PDS  + + SD+ G  Q+Y +  NG   +RI+ +   +    V S    ++  +   G +
Sbjct: 298 PDSQTLAYTSDQAGAPQIYKVNVNGGTPQRITWEGAQNQDADVSSDGKTMVMISSAGGAQ 357

Query: 371 FAIGVMKKDGSQERL-LVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-N 427
               V K+D     +  + D+ L + P+ +P+G  +I+S  +    GS L  +  +GR  
Sbjct: 358 H---VAKQDLETGAVQTITDTFLDETPSLAPNGTMVIYSSTQ--GMGSVLQLVSTDGRFK 412

Query: 428 ETLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQGKFPAWSPYL 431


>gi|156973900|ref|YP_001444807.1| translocation protein TolB [Vibrio harveyi ATCC BAA-1116]
 gi|156525494|gb|ABU70580.1| hypothetical protein VIBHAR_01610 [Vibrio harveyi ATCC BAA-1116]
          Length = 442

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 204/458 (44%), Gaps = 47/458 (10%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDV 78
           + VL+G     +  A   V T+  + + PV++   K+   + L   +S V++ DLQRS  
Sbjct: 1   MFVLLGSLTSVAHAALELVITDGIDSARPVAVVPFKWEGSEPLPTDISAVIASDLQRSGK 60

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F+ +      Q   N   +  F  W  LG   L+TG + K  +    V ++L DV  R Q
Sbjct: 61  FSPVPTSKMPQTPFNESEV-NFDAWTGLGVDALLTGSIKKNEQGNYVVNYQLVDVV-RGQ 118

Query: 139 IIGKK-----------------FFSSPAS-----WRKIAHTISDDIYQSITGEKGDFNSR 176
           + G K                  F+  A+      R+ AH ISD +Y+ +TGE+G F +R
Sbjct: 119 LTGGKSKALGGDGELVLSKDHVLFNKVATVEGPRMREYAHRISDLVYEQLTGERGAFMTR 178

Query: 177 ILFVSESVVSGI--IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           I +V   VV+        L V D DG N R +  S+ Q L  P +SP+ QK+AY ++ + 
Sbjct: 179 IAYV---VVNDKDNFPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGQKLAYVSFQNG 234

Query: 235 D----ILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                I+ +Y  +  +I   P+  G       APRFS +G +  + + K  ++ +Y++DL
Sbjct: 235 QAEIFIMNIYTGEREKITSYPRHNG-------APRFSPDGSQLALVLSKTGSLQVYTLDL 287

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           ++    ++T     N    + PD   ++F SDR GK Q+Y +        R++     + 
Sbjct: 288 KTRKLTQITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVDLGSGSTNRLTWQGSQNL 347

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              + +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S  
Sbjct: 348 GGQI-TPDGRFLVMVNRSDSGFNLAKQDLETGALQVLTKTLLDESPSIAPNGGMVIYSSI 406

Query: 410 KDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
            +      + SID  GR    L  T      P W  F+
Sbjct: 407 YNKKNVLSMVSID--GRFKARLPATNGRVRAPAWSPFL 442


>gi|59711569|ref|YP_204345.1| translocation protein TolB [Vibrio fischeri ES114]
 gi|67461862|sp|Q5E689|TOLB_VIBF1 RecName: Full=Protein tolB; Flags: Precursor
 gi|59479670|gb|AAW85457.1| periplasmic protein TolB [Vibrio fischeri ES114]
          Length = 450

 Score =  130 bits (327), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 209/458 (45%), Gaps = 41/458 (8%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
           +  L V+  GF   +      V T   + + P+ I   K+    +L   +S ++S DLQR
Sbjct: 6   ILTLFVVCLGFSQVAKAELELVITEGIDSARPIGIVPFKWHGEGKLPQDISAIISSDLQR 65

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK- 134
           S  F+ ++ +   Q     DS   ++ W  +G   +VTG V    + +  V ++L DV  
Sbjct: 66  SGKFSPVATNKMPQ-TPYKDSDINYEAWTKMGVDAIVTGEVKLNAQGKYEVTYKLIDVVR 124

Query: 135 -------------------DRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFN 174
                               R  I+  K  S S    RK AH ISD +Y+ +TGE+G F 
Sbjct: 125 GQLTKGQSKALDESGKLVLTRDHILVNKVASLSTKQLRKYAHRISDVVYEKLTGERGAFL 184

Query: 175 SRILFVSESVVS--GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +RI +V   VV+        L + D DG N R +  S+  I+  P +SP+ +K+AY +++
Sbjct: 185 TRIAYV---VVNDKAQYPYQLRIADYDGYNERLVLKSKQPIM-SPAWSPDGKKLAYVSFE 240

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           +    ++++M+    +  + I ++     APRFS +G +  I + K  ++ IY VDL++ 
Sbjct: 241 NRKS-QIFIMNIYTGKR-ELIASYPRHNGAPRFSHDGDKLAIVLSKSGSLQIYVVDLKTK 298

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              ++T     N    ++PD+  ++F SDR GK Q+Y +       KR++     +    
Sbjct: 299 KMSQITRGRANNTEPFWAPDNKSLIFTSDRGGKPQIYRVNLGDGSTKRLTWQGSQNLGGQ 358

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS---RK 409
           + +P G  I     S   F +     +    ++L +    ++P+ +P+G  +I+S   RK
Sbjct: 359 I-TPDGKYIVMVNRSETGFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGMVIYSSIYRK 417

Query: 410 KDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           ++      L  + ++GR    L  T      P W  F+
Sbjct: 418 QN-----VLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|93005961|ref|YP_580398.1| TolB-like [Psychrobacter cryohalolentis K5]
 gi|92393639|gb|ABE74914.1| TolB-like [Psychrobacter cryohalolentis K5]
          Length = 430

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 190/404 (47%), Gaps = 29/404 (7%)

Query: 50  IAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
           +AF  F     L    S ++  DL ++++  + SQ+  +Q  ++ +       W S+G  
Sbjct: 44  VAFVPFAGDSVL----SPIIVNDLSKTEL-KVTSQNLPQQPRSSSELAGTLPVWQSMGIP 98

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS---PASWRKIAHTISDDIYQSI 166
            LV G   +  + ++  ++ + +VK  + I GK+  ++     S R   H I+D +Y+ I
Sbjct: 99  YLVVGST-RSSRGKVVTDYEVIEVKTGRVIEGKQTLTADNNKDSMRYAGHVIADKVYELI 157

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           TG  GDF+ RI ++ E + +G  K S L VMD DG N + +T     I F P +SP+  +
Sbjct: 158 TGIPGDFSGRIAYIEE-IGTGKAKVSRLKVMDADGENAKTITEVSGSI-FSPAWSPDGNR 215

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +AY+   D+    +Y+       A   +  F    L+P FS +G + L S   + + DIY
Sbjct: 216 IAYSVQRDKSYPVIYVQSVSGGGA-TPLTPFPGSNLSPSFSPDGSKILFSSSFEGSADIY 274

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQ 343
            +        RLTN     +  SY+PD    VF SD+ G  K Q+Y  +       ++S 
Sbjct: 275 EMSASGGQPRRLTNWPSSEVQPSYAPDGRSFVFVSDKTGFNKPQIYRYEFGSGRTTKVSN 334

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
              A+   P +S  G  IAF   +G   A  VM   G+    L      +AP++SP+G+ 
Sbjct: 335 SGYAT--SPQFSSDGTQIAF--LNGRSAA--VMNSGGAVTANLGNTGIDEAPSFSPNGKR 388

Query: 404 LIFSRKKDGDTGSKLYSIDLNG------RNETLINTPAYASDPQ 441
           ++++ K+ G     L    LNG        +  I +P +++ P+
Sbjct: 389 VVYASKQGGK--GVLTIKSLNGGEAFGKSGQGTIRSPVWSASPR 430



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 3/139 (2%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++SPD ++I +   R+    +  +QS              S   P +SP G  I F+ 
Sbjct: 206 SPAWSPDGNRIAYSVQRDKSYPVIYVQSVSGGGATPLTPFPGSNLSPSFSPDGSKILFSS 265

Query: 366 FSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  I  M   G Q R L     S +Q P+++P GRS +F   K G    ++Y  + 
Sbjct: 266 SFEGSADIYEMSASGGQPRRLTNWPSSEVQ-PSYAPDGRSFVFVSDKTGFNKPQIYRYEF 324

Query: 424 NGRNETLINTPAYASDPQW 442
                T ++   YA+ PQ+
Sbjct: 325 GSGRTTKVSNSGYATSPQF 343


>gi|197336086|ref|YP_002155723.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio fischeri
           MJ11]
 gi|226705896|sp|B5FD05|TOLB_VIBFM RecName: Full=Protein tolB; Flags: Precursor
 gi|197317576|gb|ACH67023.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio fischeri
           MJ11]
          Length = 450

 Score =  130 bits (326), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 208/458 (45%), Gaps = 41/458 (8%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
           +  L V+  GF   +      V T   + + P+ I   K+    +L   +S ++S DLQR
Sbjct: 6   ILTLFVVCLGFSQVAKAELELVITEGIDSARPIGIVPFKWHGEGKLPQDISAIISSDLQR 65

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK- 134
           S  F+ I  +   Q     DS   ++ W  +G   +VTG V    + +  V ++L DV  
Sbjct: 66  SGKFSPIPTNKMPQ-TPYKDSDINYEAWTKMGVDAIVTGEVKLNAQGKYEVTYKLIDVVR 124

Query: 135 -------------------DRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFN 174
                               R  I+  K  S S    RK AH ISD +Y+ +TGE+G F 
Sbjct: 125 GQLTKGQSKALDESGKLVLTRDHILVNKVASLSTKQLRKYAHRISDVVYEKLTGERGAFL 184

Query: 175 SRILFVSESVVS--GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +RI +V   VV+        L + D DG N R +  S+  I+  P +SP+ +K+AY +++
Sbjct: 185 TRIAYV---VVNDKAQYPYQLRIADYDGYNERLVLKSKQPIM-SPAWSPDGKKLAYVSFE 240

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           +    ++++M+    +  + I ++     APRFS +G +  I + K  ++ IY VDL++ 
Sbjct: 241 NRKS-QIFIMNIYTGKR-ELIASYPRHNGAPRFSHDGDKLAIVLSKSGSLQIYVVDLKTK 298

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              ++T     N    ++PD+  ++F SDR GK Q+Y +       KR++     +    
Sbjct: 299 KMSQITRGRANNTEPFWAPDNKSLIFTSDRGGKPQIYRVNLGDGSTKRLTWQGSQNLGGQ 358

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS---RK 409
           + +P G  I     S   F +     +    ++L +    ++P+ +P+G  +I+S   RK
Sbjct: 359 I-TPDGKYIVMVNRSETGFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGMVIYSSIYRK 417

Query: 410 KDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           ++      L  + ++GR    L  T      P W  F+
Sbjct: 418 QN-----VLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|149192087|ref|ZP_01870311.1| translocation protein TolB precursor [Vibrio shilonii AK1]
 gi|148834073|gb|EDL51086.1| translocation protein TolB precursor [Vibrio shilonii AK1]
          Length = 442

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 198/425 (46%), Gaps = 36/425 (8%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P++I   K+    +L   VS V++ DLQRS  F+ ++     Q   +   I  F+ W S+
Sbjct: 29  PIAIVPFKWEGEGKLPHDVSAVIASDLQRSGKFSPVATSKMPQTPYDASDI-NFEAWTSI 87

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK-----------------FFSSPA 149
           G   L+TG ++K  +    V ++L DV  R Q+ G K                  F   A
Sbjct: 88  GVDSLLTGTIVKNAEGNYEVSYQLVDVV-RGQLTGGKSKALSDDGQLVLSNDHVLFKKKA 146

Query: 150 S-----WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--IKNSLCVMDRDGAN 202
           +      R+ AH ISD +Y+ +TGE+G F +RI +V   VV+        + + D DG N
Sbjct: 147 TVPGNRLREYAHRISDLVYEELTGERGAFLTRIAYV---VVNDKDQYPYQMRIADYDGYN 203

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + +  S+ Q L  P +SP+ +K+AY ++ +     +++M+    +  ++I +F     A
Sbjct: 204 EKLVLRSK-QPLMSPAWSPDGKKLAYVSFQNGQA-EIFIMNIYTGKR-EKITSFPRHNGA 260

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           PRFS +GK   +++ K   + +Y+++L++    ++T+    N    + PD   ++F SDR
Sbjct: 261 PRFSPDGKTLALTLSKTGQLHVYTLNLETRKLRQITSGRSNNTEPFWKPDGKSLIFTSDR 320

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G  Q+Y +  +    KRI+     +    + +P G  +     S   F +     +   
Sbjct: 321 GGNPQIYEVNLSDGKTKRITWQGRQNLGGQI-TPDGRYLVMVNRSNSGFNLAKQDLETGS 379

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQ 441
            ++L +    ++P+ +P+G  +I+S   +      + SID  GR    L  T      P 
Sbjct: 380 VQILTKTLLDESPSIAPNGGMVIYSSIYNKTNVLSMVSID--GRFKARLPATNGRVRAPA 437

Query: 442 WVGFM 446
           W  F+
Sbjct: 438 WSPFL 442


>gi|119504264|ref|ZP_01626344.1| translocation protein TolB precursor [marine gamma proteobacterium
           HTCC2080]
 gi|119459772|gb|EAW40867.1| translocation protein TolB precursor [marine gamma proteobacterium
           HTCC2080]
          Length = 431

 Score =  130 bits (326), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 202/433 (46%), Gaps = 13/433 (3%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
            L+L L    FP      +++     N +P+++    +         V+ ++  DL RS 
Sbjct: 7   VLILSLCVATFPALAQLQIEITRGVDNPTPIAVVPFGWSGSGASPEDVARIIDSDLARSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F+ +S+       +    +  F+DW ++ +  ++ GR        L++ ++L+D     
Sbjct: 67  QFSPVSRRDMLSYPSRGSEL-YFRDWRAINSDYVLIGRYELAAAGNLKLSWQLFDSTREL 125

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVM 196
            +       + +  R +AH I+D++Y+ +TG  G F +R+L+VS +   +G     L + 
Sbjct: 126 SVEEGVVMGAASEVRMLAHKIADEVYEKLTGIPGAFATRLLYVSVTRNPAGKDFYRLTLA 185

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D DGA    L  SR+ IL  P +SPN  +VAY +++      +Y  + R   A +++ NF
Sbjct: 186 DSDGARPIVLLESREPIL-GPSWSPNGDEVAYVSFETSRPA-IYRQNLRTG-AREQLTNF 242

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           + +  +P FS +G    + + KD + DIY ++L S    RLT    I+   ++ PD   +
Sbjct: 243 KGLNNSPVFSPDGNSMAMVLSKDGSPDIYLMNLASKRLTRLTKHYAIDTEPTWMPDGQSL 302

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +F SDR G+ Q+Y       +  R++ D   +    V +  G  +A        + I V 
Sbjct: 303 LFTSDRGGRPQIYRYDLKSGNTTRVTFDGRYNARARV-AQDGRNVALVHQQNGAYHIAVF 361

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                +  +L   S  ++PT +P+G  ++++ K++G   S L ++ ++G      N PA 
Sbjct: 362 DLVTERLTVLTTTSLDESPTIAPNGSIVLYATKRNGQ--SILGAVAVDG--GVSFNLPAR 417

Query: 437 ---ASDPQWVGFM 446
                +P W  ++
Sbjct: 418 DGEVQEPSWSPYL 430


>gi|148359107|ref|YP_001250314.1| TolB colicin import protein [Legionella pneumophila str. Corby]
 gi|166229981|sp|A5IC68|TOLB_LEGPC RecName: Full=Protein tolB; Flags: Precursor
 gi|148280880|gb|ABQ54968.1| TolB colicin import protein [Legionella pneumophila str. Corby]
          Length = 419

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 191/410 (46%), Gaps = 30/410 (7%)

Query: 46  SPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNS 105
           S + IA   F S D    ++  V+  DL  S  F +IS     Q   +  S+   +    
Sbjct: 30  SALPIAINSFGS-DAAAQEIGNVIENDLTISGQFKIISG---PQGANSQSSVSTLRQ--- 82

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQ 164
           LGA  +VTGRV + G +R+ V F L D      I+  K F   A+  R +AH ISD++YQ
Sbjct: 83  LGADSVVTGRVNQVG-NRIEVSFTLADAVANGNILLTKTFQINANQVRALAHHISDEVYQ 141

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +TGE+G F++RI ++S     G  + SL V D DG N + L  S + I+  P +SPN +
Sbjct: 142 KLTGERGIFSTRIAYISVQRNGGRSRYSLEVADADGHNPQSLLVSSEPIM-SPSWSPNGK 200

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            ++Y +++ +   +  +    ++   +R I +F  +  AP +S +G+   + + K     
Sbjct: 201 SISYVSFEKK---KAEIFTVSVETGQRRLITSFPGINGAPAWSPDGQHLAVVLSKSGTPK 257

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS- 342
           IY VDL S + ++LT    I+    YSPD   ++F S R G  Q+Y +        R++ 
Sbjct: 258 IYDVDLSSGSMKQLTFGNSIDTEPRYSPDGRSLLFTSGRGGSPQVYRLSLADGQISRVTF 317

Query: 343 ---QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
               +  ASY     +P    I        +F IGV    G     L      ++P+ SP
Sbjct: 318 EGNYNARASY-----TPDMKHIVMLHREDRQFNIGVQNTGGGPISNLTFSGLDESPSVSP 372

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFM 446
           + R ++++ +        + SID  GR    +  PA   D   P W  ++
Sbjct: 373 NSRLVLYATRYQNRGVLGIVSID--GR--IRMRLPAREGDVQEPAWSPYL 418


>gi|319943002|ref|ZP_08017285.1| TolB protein [Lautropia mirabilis ATCC 51599]
 gi|319743544|gb|EFV95948.1| TolB protein [Lautropia mirabilis ATCC 51599]
          Length = 425

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 191/399 (47%), Gaps = 20/399 (5%)

Query: 48  VSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLIS-QDSFKQKITNPDSIPRFQDWNSL 106
           V +A   F    +   ++  V+ +DLQRS +F L++  ++  +      S  R Q     
Sbjct: 38  VPLALAPFNGAGQAPQQLDVVIQEDLQRSGMFRLVNLTETLSENSPLDMSALRGQ----- 92

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           GA  ++ G V      RL   ++L D   +  I      +  +  R   H I+D +Y+ +
Sbjct: 93  GADSVLVGSVQPVANARLEFRYKLADTVRQSVITEATMTAGESDVRLAGHRIADIVYEKL 152

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           TG KG F++RI FV++       +  L V D DG N++    + + I+  P +SP+ +++
Sbjct: 153 TGIKGIFSTRIAFVTKQGN----RYRLNVADWDGQNVQTALNAGEPII-SPAWSPDGKRL 207

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           AY +++ +  + VY+ D    +  K +  F+    AP +S +G+   +++ +D    IY 
Sbjct: 208 AYVSFETKKPV-VYVHDLASGQR-KAVAKFKGSNSAPAWSHDGRSLAVTLTRDGGSQIYQ 265

Query: 287 VDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           V      +  RLT +  I+    YSPD   + F SDR G  Q+Y M SNG    R++   
Sbjct: 266 VSADGGESARRLTQSSSIDTEPVYSPDGKFLYFTSDRGGAPQIYRMPSNGGAASRVTFG- 324

Query: 346 EASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            +SY   P  SP G  +A+      +F I +       E LL +    ++P+++P+G+ +
Sbjct: 325 -SSYNVSPRISPDGQQMAYVTQRNGRFLIALKDLQSGDETLLTDTGEEESPSFAPNGQWV 383

Query: 405 IFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           +++ +  G     L ++  +GR  + L ++ +   +P W
Sbjct: 384 MYTTRAGGR--EYLMAVSTDGRVKQRLSSSTSSVREPAW 420


>gi|269139918|ref|YP_003296619.1| translocation protein [Edwardsiella tarda EIB202]
 gi|267985579|gb|ACY85408.1| translocation protein [Edwardsiella tarda EIB202]
 gi|304559753|gb|ADM42417.1| tolB protein precursor [Edwardsiella tarda FL6-60]
          Length = 430

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 196/418 (46%), Gaps = 24/418 (5%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           +  LLVL        +   +    +SA   P+ +   K++        +  +++ DL+ S
Sbjct: 8   MVGLLVLWASVLHAEVRIVITQGVDSAR--PIGVVPFKWMGPGAAPENIGGIIAADLRNS 65

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK-D 135
             FN I      Q+ +    +     W +LG   +V G+V         V ++L D   +
Sbjct: 66  GKFNPIDASRMPQQPSTAAEVTP-AAWTALGIDAVVVGQVQPGADGSYLVSYQLVDTSGN 124

Query: 136 RKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
              ++ +  +     W R  AHT SD++++ +TG KG F +RI +V ++   G     L 
Sbjct: 125 PGSVLAQNQYKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELR 183

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V D DG N +++     + L  P +SP+  K+AY T+  E      ++ T  + A +++ 
Sbjct: 184 VADYDGYN-QFVVHRSAEPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLSNGAIRQVA 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F     +P FS +G +   ++ K  ++++Y +DL S A  ++T+    N   ++ PDS 
Sbjct: 241 SFPRHNGSPAFSPDGSKLAFALSKTGSLNLYVMDLASGAIRQVTDGRSNNTEPTWFPDSQ 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            + F SD+ G+ Q+Y M  NG   +R+    SQ+++A       SP G  +     S   
Sbjct: 301 NLAFTSDQAGRPQIYKMNINGGAAQRLTWEGSQNQDAEV-----SPDGKFLVMV--SSNA 353

Query: 371 FAIGVMKKD-GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            A  + K D G+    ++ D+ L + P+ +P+G  +I+S  +    GS L  + ++GR
Sbjct: 354 GAQHIAKLDLGTNATQVLTDTFLDETPSIAPNGTMVIYSSTQ--GLGSVLQLVSIDGR 409


>gi|261343492|ref|ZP_05971137.1| Tol-Pal system beta propeller repeat protein TolB [Providencia
           rustigianii DSM 4541]
 gi|282568638|gb|EFB74173.1| Tol-Pal system beta propeller repeat protein TolB [Providencia
           rustigianii DSM 4541]
          Length = 430

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 178/391 (45%), Gaps = 20/391 (5%)

Query: 39  ATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI-TNPDSI 97
             NSA   P+ +   K+        +V ++V  DL+ S  FN I      Q+  T  + I
Sbjct: 30  GVNSAQ--PIGVVPFKWAGAGAPPQEVGQIVGADLRNSGKFNPIEPSRMPQQPGTASEVI 87

Query: 98  PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK-DRKQIIGKKFFSSPASW-RKIA 155
           P    W +LG   +V G+V         V ++L DV  +   ++ +  F     W R  A
Sbjct: 88  P--DAWTTLGINAVVVGQVQPAADGSFVVSYQLVDVAANPGAVLAQNQFKVTKDWLRYAA 145

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           HT SD++++ +TG +G F +RI +V ++   G     L V D DG N ++      + L 
Sbjct: 146 HTASDEVFEKLTGIRGAFRTRIAYVVKTN-GGQYPFELRVSDYDGFN-QFTVHRSPEPLM 203

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +SP+ QK+AY T++        ++ T    A +++  F     AP FS +G +   +
Sbjct: 204 SPAWSPDGQKIAYVTFESGS--SALVIQTLSSGAVRQVAKFPRHNGAPAFSPDGTKLAFA 261

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + K  ++++Y +DL S    ++T+    N   S+ PDS  +V+ SD+ G+ Q+Y M  NG
Sbjct: 262 LSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPSWMPDSQTLVYTSDQAGRPQVYKMNING 321

Query: 336 SDQKRIS----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
               R+S    Q+++A       SP G  +      G +  I            L     
Sbjct: 322 GSPVRVSYEGTQNQDADV-----SPDGTFLVMVSSGGGQQHIAKQDLATGNVEYLTTTFL 376

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            + P+ +P+G  +I+S  +   T  +L S D
Sbjct: 377 DETPSIAPNGTMVIYSSSQGLGTILQLVSTD 407


>gi|84388529|ref|ZP_00991076.1| translocation protein TolB precursor [Vibrio splendidus 12B01]
 gi|84377078|gb|EAP93949.1| translocation protein TolB precursor [Vibrio splendidus 12B01]
          Length = 450

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 209/463 (45%), Gaps = 46/463 (9%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           + ++   L+     F   ++   +    NSA   P++I   ++   + L   VS V++ D
Sbjct: 5   LLLSFVFLIATSSQFAHAALELVITDGINSAR--PIAIVPFRWEGAEPLPHDVSAVIASD 62

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           LQRS  F+ ++     Q   +   +  F  W +LG   L+TG + K  + +  V ++L D
Sbjct: 63  LQRSGKFSPVATSKMPQTPYSESEV-DFDAWTNLGVDSLLTGSITKNTEGQYVVNYQLID 121

Query: 133 V-------------KDRKQIIGKK---FFSSPAS-----WRKIAHTISDDIYQSITGEKG 171
           +              D  Q++  K    F+  A+      R+ AH ISD +Y+ +TGEKG
Sbjct: 122 IVRGQLTKGQSRALSDEGQLVLSKDHVLFNKKATVPGKRLREYAHRISDLVYEELTGEKG 181

Query: 172 DFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            F +RI +V   VV+   K    L V D DG N R +  S+ Q L  P +SP+ +K+AY 
Sbjct: 182 AFLTRISYV---VVNDKDKYPYQLRVADYDGFNERLVLRSK-QPLMSPAWSPDGKKLAYV 237

Query: 230 TYDDED----ILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++ +      I+ +Y  D  ++   P+  G       APRFS +GK   + + K  ++ +
Sbjct: 238 SFQNGQAEIFIMNIYTGDREKVTSYPRHNG-------APRFSPDGKTLALVLSKTGSLQV 290

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           Y++DL S    ++T     N    + PD   ++F SDR GK Q+Y +  + +   RI+  
Sbjct: 291 YTLDLASRKLTQITRGRSNNTEPFWYPDGKSLIFTSDRGGKPQIYNVNLSNNSTSRITWQ 350

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
              +    + +P G  +     S   F +     +    ++L +    ++P+ +P+G  +
Sbjct: 351 GSQNLGGQI-TPDGRFLIMVNRSNSGFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGMV 409

Query: 405 IFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           I+S   +      + SID  GR    L  T      P W  F+
Sbjct: 410 IYSSIYNKTNVLSMVSID--GRFKARLPATNGRVRAPAWSPFL 450


>gi|293390508|ref|ZP_06634842.1| Tol-Pal system beta propeller repeat protein TolB [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951042|gb|EFE01161.1| Tol-Pal system beta propeller repeat protein TolB [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 426

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 192/423 (45%), Gaps = 48/423 (11%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYS--PVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
             L ++L+G  F     A V++  +    S  P+++   K+         ++E++S DL+
Sbjct: 8   FSLFIMLLG--FTMVARAEVRIVIDEVMDSARPIAVVPFKWNGPGSAPANIAEIISADLR 65

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S  FN + +    Q+ T+   +   + W++LG + ++ G+V         + ++L D  
Sbjct: 66  NSGKFNPLPESKMPQQPTSASEV-NPEAWSALGIEAVIVGQVTPS-NGGFDIAYQLVDTM 123

Query: 135 DR-KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                I+ +  ++    W R  AHTISD+ ++ +TG +G F +RI +V +    G     
Sbjct: 124 GSVGSILSQNQYTVMQKWLRYGAHTISDETFEKLTGIRGAFRTRIAYVVQKN-GGSQPYE 182

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V D DG N +++     Q    P +SP+ +K+AY T++++   +V L D  +  A K 
Sbjct: 183 VRVADYDGFN-QFIVNRSSQPFMSPAWSPDGKKLAYVTFENKK-AQVVLQDL-VSMARKV 239

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + +F     AP FS +G R   +  KD  ++IY  +L S    +LT+    N   S+SPD
Sbjct: 240 VASFPGHNGAPAFSPDGSRLAFASSKDGVLNIYVTNLGSGQVSQLTSGAGNNTEPSWSPD 299

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQK--------RISQDKE------------------ 346
              IVF SDR G  Q+Y M ++G            +IS D                    
Sbjct: 300 GQSIVFTSDRGGSPQVYRMSASGGGASLIGGRGSGQISSDGNLLVMVDVNNNIVKKDLTS 359

Query: 347 -------ASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPT 396
                  +++ D  P  SP G ++ ++   G    + ++  DG  + RL   D  ++ P 
Sbjct: 360 GSSEVLSSTFLDESPSISPNGIMVIYSSTQGLGKVLQLVSTDGRFKARLPGNDGQVKFPA 419

Query: 397 WSP 399
           WSP
Sbjct: 420 WSP 422


>gi|261868492|ref|YP_003256414.1| translocation protein TolB [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413824|gb|ACX83195.1| hypothetical protein D11S_1837 [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 426

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 192/423 (45%), Gaps = 48/423 (11%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYS--PVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
             L ++L+G  F     A V++  +    S  P+++   K+         ++E++S DL+
Sbjct: 8   FGLFIMLLG--FAMVARAEVRIVIDEVMDSARPIAVVPFKWNGPGSAPANIAEIISADLR 65

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S  FN + +    Q+ T+   +   + W++LG + ++ G+V         + ++L D  
Sbjct: 66  NSGKFNPLPESKMPQQPTSASEV-NPEAWSALGIEAVIVGQVTPS-NGGFDIAYQLVDTM 123

Query: 135 DR-KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                I+ +  ++    W R  AHTISD+ ++ +TG +G F +RI +V +    G     
Sbjct: 124 GSVGSILSQNQYTVMQKWLRYGAHTISDETFEKLTGIRGAFRTRIAYVVQKN-GGSQPYE 182

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V D DG N +++     Q    P +SP+ +K+AY T++++   +V L D  +  A K 
Sbjct: 183 VRVADYDGFN-QFIVNRSSQPFMSPAWSPDGKKLAYVTFENKK-AQVVLQDL-VSMARKV 239

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + +F     AP FS +G R   +  KD  ++IY  +L S    +LT+    N   S+SPD
Sbjct: 240 VASFPGHNGAPAFSPDGSRLAFASSKDGVLNIYVTNLGSGQVSQLTSGAGNNTEPSWSPD 299

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQK--------RISQDKE------------------ 346
              IVF SDR G  Q+Y M ++G            +IS D                    
Sbjct: 300 GQSIVFTSDRGGSPQVYRMSASGGGASLIGGRGSGQISSDGNLLVMVDVNNNIVKKDLTS 359

Query: 347 -------ASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPT 396
                  +++ D  P  SP G ++ ++   G    + ++  DG  + RL   D  ++ P 
Sbjct: 360 GSSEVLSSTFLDESPSISPNGIMVIYSSTQGLGKVLQLVSTDGRFKARLPGNDGQVKFPA 419

Query: 397 WSP 399
           WSP
Sbjct: 420 WSP 422


>gi|254499317|ref|ZP_05111989.1| TolB colicin import protein [Legionella drancourtii LLAP12]
 gi|254351472|gb|EET10335.1| TolB colicin import protein [Legionella drancourtii LLAP12]
          Length = 419

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 179/399 (44%), Gaps = 57/399 (14%)

Query: 46  SPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNS 105
           S + IA   F S D    ++S+++  DL  S  F ++S          P++         
Sbjct: 30  SALPIAINTFGS-DRASQEISQIIENDLTFSGQFKIVSGPQ------GPNAQSSVSTLKQ 82

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWD-VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           LGA  +VTGRV+  G +   + F L D V +   ++ K +  +    R +AH ISD++YQ
Sbjct: 83  LGADSVVTGRVVPVG-NHYEISFTLTDAVANGTTLLTKTYQVNANQLRPLAHHISDEVYQ 141

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +TGE+G F++RI ++S          +L V D DG N + L  S + I+  P ++PN +
Sbjct: 142 KLTGERGIFSTRIAYISVQRTPQKTNYALEVADADGHNPQSLLISSEPIM-SPSWAPNGK 200

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            ++Y +++ +   R  +    ++   +R I +F  +  AP +S +G++  + + K     
Sbjct: 201 SISYVSFEKK---RAQIFTVSVETGQRRLITSFPGINGAPAWSPDGRQLAVVLSKSGTPK 257

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS- 342
           IYSVD+ S   ++LT    I+    Y+PD   I+F S R G  Q+Y +        R++ 
Sbjct: 258 IYSVDINSGNMKQLTFGDAIDTEPRYAPDGKSILFTSGRGGSPQIYRLSLADGQVSRMTF 317

Query: 343 ---QDKEASYF--------------------------------------DPVWSPQGDLI 361
               +  ASY                                        P  +P G LI
Sbjct: 318 EGNYNARASYTPDMKSIVMLHRDDKQFNIGMQNVSGGPVVSLTFSGRDESPSVAPNGRLI 377

Query: 362 AFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
            +   + +K  +G++  DG  + +L   D ++Q P WSP
Sbjct: 378 LYATHNQDKGILGIVSLDGRIRMKLPARDGDIQEPAWSP 416


>gi|54297484|ref|YP_123853.1| TolB protein [Legionella pneumophila str. Paris]
 gi|67461926|sp|Q5X4Z1|TOLB_LEGPA RecName: Full=Protein tolB; Flags: Precursor
 gi|53751269|emb|CAH12680.1| TolB protein [Legionella pneumophila str. Paris]
          Length = 419

 Score =  129 bits (325), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 193/410 (47%), Gaps = 30/410 (7%)

Query: 46  SPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNS 105
           S + IA   F S D    ++  V+  DL  S  F +IS     Q   +  S+   +    
Sbjct: 30  SALPIAINSFGS-DAAAQEIGNVIENDLTISGQFKIISG---PQGANSQSSVSTLRQ--- 82

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQ 164
           LGA  +VTGRV + G +R+ V F L D      I+  K F   A+  R +AH ISD++YQ
Sbjct: 83  LGADSVVTGRVNQVG-NRIEVSFTLADAVANGNILLTKTFQINANQVRALAHHISDEVYQ 141

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +TGE+G F++RI ++S     G  + SL V D DG N + L  S + I+  P +SPN +
Sbjct: 142 KLTGERGIFSTRIAYISVQRNGGRSRYSLEVADADGHNPQSLLVSSEPIM-SPSWSPNGK 200

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            ++Y +++ +   +  +    ++   +R I +F  +  AP +S +G+   + + K     
Sbjct: 201 SISYVSFEKK---KAEIFTVSVETGQRRLITSFPGINGAPAWSPDGRHLAVVLSKSGTPK 257

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS- 342
           IY VDL S + ++LT    I+    YSPD   ++F S R G  Q+Y +        R++ 
Sbjct: 258 IYDVDLSSGSMKQLTFGNSIDTEPRYSPDGRSLLFTSGRGGSPQVYRLSLADGQISRVTF 317

Query: 343 ---QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
               +  ASY     +P    I        +F IGV    G     L      ++P+ SP
Sbjct: 318 EGNYNARASY-----TPDMKHIVMLHREDRQFNIGVQNTGGGPISNLTFSGLDESPSVSP 372

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFM 446
           + R ++++ +   D G  L  + ++GR    +  PA   D   P W  ++
Sbjct: 373 NSRLVLYATRYQ-DRG-VLGIVSIDGR--IRMRLPAREGDVQEPAWSPYL 418


>gi|296107155|ref|YP_003618855.1| TolB colicin import protein [Legionella pneumophila 2300/99 Alcoy]
 gi|295649056|gb|ADG24903.1| TolB colicin import protein [Legionella pneumophila 2300/99 Alcoy]
          Length = 419

 Score =  129 bits (324), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 205/445 (46%), Gaps = 37/445 (8%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            N  I+L LLL      F   + A     T   N S + IA   F S D    ++  V+ 
Sbjct: 2   FNRIISLFLLL------FTGQVIALDLELTQGIN-SALPIAINSFGS-DAAAQEIGNVIE 53

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL  S  F +IS     Q   +  S+   +    LGA  +VTGRV + G +R+ V F L
Sbjct: 54  NDLTISGQFKIISG---PQGANSQSSVSTLRQ---LGADSVVTGRVNQVG-NRIEVSFTL 106

Query: 131 WDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            D      I+  K F   A+  R +AH ISD++YQ +TGE+G F++RI ++S     G  
Sbjct: 107 ADAVANGNILLTKTFQINANQVRALAHHISDEVYQKLTGERGIFSTRIAYISVQRNGGRS 166

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + SL V D DG N + L  S + I+  P +SPN + ++Y +++ +   +  +    ++  
Sbjct: 167 RYSLEVADADGHNPQSLLVSSEPIM-SPSWSPNGKSISYVSFEKK---KAEIFTVSVETG 222

Query: 250 PKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            +R I +F  +  AP +S +G+   + + K     IY VDL S + ++LT    I+    
Sbjct: 223 QRRLITSFPGINGAPAWSPDGRHLAVVLSKSGTPKIYDVDLSSGSMKQLTFGNSIDTEPR 282

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGDLIAFT 364
           YSPD   ++F S R G  Q+Y +        R++     +  ASY     +P    I   
Sbjct: 283 YSPDGRSLLFTSGRGGSPQVYRLSLADGQISRVTFEGNYNARASY-----TPDMKHIVML 337

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                +F IGV    G     L      ++P+ SP+ R ++++ +   D G  L  + ++
Sbjct: 338 HREDRQFNIGVQNTGGGPISNLTFSGLDESPSVSPNSRLVLYATRYQ-DRG-VLGIVSID 395

Query: 425 GRNETLINTPAYASD---PQWVGFM 446
           GR    +  PA   D   P W  ++
Sbjct: 396 GR--IRMRLPAREGDVQEPAWSPYL 418


>gi|315180559|gb|ADT87473.1| translocation protein TolB precursor [Vibrio furnissii NCTC 11218]
          Length = 439

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 203/444 (45%), Gaps = 36/444 (8%)

Query: 27  FFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDS 86
           F   ++   +    NSA   P++I   K+    +L   VS V++ DLQRS  F+ I  + 
Sbjct: 8   FANAALELVITDGINSAR--PIAIVPFKWEGKTKLPQDVSGVIASDLQRSGKFSPIPTNK 65

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV------------- 133
             Q   N   + +F  W S+G   L+TG + +       + ++L DV             
Sbjct: 66  MPQTPYNEADV-KFDAWTSIGVDALLTGSITQNADGNYVINYQLVDVVRGQLTQGQSRAL 124

Query: 134 -KDRKQIIGK------KFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
             D + ++ K      K  + PA   R+ AH I+D +Y+ +TGE+G F +RI +V   VV
Sbjct: 125 SSDGQLVLSKDHVLFNKVATVPAKRMREYAHRIADLVYEELTGERGAFLTRIAYV---VV 181

Query: 186 SG--IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           +        L V D DG N R +  S+ Q L  P +SP+ +K+AY ++ +     +Y+M+
Sbjct: 182 NDKDAYPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGKKLAYVSFQNGQA-EIYIMN 239

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  +++ ++     APRFS +GK   + + K  ++ +Y++DL S    ++T+    
Sbjct: 240 IYTGER-EKVTSYPRHNGAPRFSPDGKTLALVLSKTGSLQVYTLDLTSRKLTQITSGRSN 298

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N    ++PD   ++F SDR GK Q+Y +       KR++     +    + +P G  +  
Sbjct: 299 NTEPFWNPDGKSLIFTSDRGGKPQIYQVNLTDGATKRLTWQGSQNLGGQI-TPDGRFLVM 357

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              S   F +     +    ++L +    ++P+ +P+G  +I+S   +      + SID 
Sbjct: 358 VNRSNSGFNLAKQDLETGSVQILTKTLLDESPSIAPNGGMVIYSSIYNKANVLSMVSID- 416

Query: 424 NGR-NETLINTPAYASDPQWVGFM 446
            GR    L  T      P W  F+
Sbjct: 417 -GRFKARLPATNGRVRAPAWSPFL 439


>gi|308186083|ref|YP_003930214.1| Protein tolB precursor [Pantoea vagans C9-1]
 gi|308056593|gb|ADO08765.1| Protein tolB precursor [Pantoea vagans C9-1]
          Length = 431

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/434 (23%), Positives = 188/434 (43%), Gaps = 56/434 (12%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +++ L   ++L        +   +    N+A   P+ +   K+         V  +V+ D
Sbjct: 5   LRVTLGFFILLWAAMLHAEVRIEITQGVNTAR--PIGVVPFKWAGAGAAPEDVGGIVAAD 62

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
           L+ S  FN + +    Q+   P S    Q   W++LG   +V G+V        +V ++L
Sbjct: 63  LRNSGKFNPLDRSRLPQQ---PASAQEVQPAAWSALGIDAVVVGQVASNPDGSYQVSYQL 119

Query: 131 WDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D       ++ +  +     W R  AHT SD+ +Q +TG KG F +RI +V ++   G 
Sbjct: 120 VDTGGAPGTVLAQNSYKVTKQWLRYAAHTASDETFQKLTGIKGAFRTRIAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  KVAY T+  E      ++ T  + 
Sbjct: 179 FPYELRVADYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTF--ESGKSALVVQTLSNG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ ++     AP FS +G +   ++ K  ++++Y +DL S  T ++T+  + +   +
Sbjct: 236 AIRQVASYPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQTRQVTDGRYNSTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-------------------------- 342
           + PDS  + + SD+ G  Q+Y +  NG   +RI+                          
Sbjct: 296 WFPDSQTLAYTSDQAGAPQIYKVGLNGGTPQRITWEGGQNQDADVATDGKSMVMISTSGG 355

Query: 343 ------QDKEA--------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERL 385
                 QD E         ++ D  P  +P G ++ ++   G    + ++  DG  + RL
Sbjct: 356 AQHVAKQDLETGAVQTLTDTFLDETPSLAPNGTMVIYSSTQGMGSVLQLVSTDGRFKARL 415

Query: 386 LVEDSNLQAPTWSP 399
              D  ++ P WSP
Sbjct: 416 PATDGQVKFPAWSP 429


>gi|323495161|ref|ZP_08100246.1| translocation protein TolB [Vibrio brasiliensis LMG 20546]
 gi|323310601|gb|EGA63780.1| translocation protein TolB [Vibrio brasiliensis LMG 20546]
          Length = 437

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 197/429 (45%), Gaps = 44/429 (10%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P++I   K+    +L   VS V++ DLQRS  F+ ++ +   Q   +   +  F  W  L
Sbjct: 24  PIAIVPFKWEGNGKLPEDVSAVIASDLQRSGKFSPVATNKMPQTPYSEAEV-DFNAWTGL 82

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDV-------------KDRKQIIGKK---FFSSPAS 150
           G   LVTG + +  +    + ++L DV              D  Q++  K    F+  A+
Sbjct: 83  GVDALVTGSITQNAEGNYVINYQLVDVVRGQLTQGQSKALSDDGQLVLSKDHVLFNKRAT 142

Query: 151 -----WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--IKNSLCVMDRDGANI 203
                 R+ AH ISD +Y+++TGEKG F +RI +V   VV+        L V D DG N 
Sbjct: 143 VPGKRLREYAHRISDLVYEALTGEKGAFLTRIAYV---VVNDKDQFPYQLRVSDYDGYNE 199

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDED----ILRVYLMD-TRIDRAPKRIGNFRS 258
           R +  S+ Q L  P +SP+ +K+AY ++ +      I+ +Y  +  ++   P+  G    
Sbjct: 200 RLVLRSK-QPLMSPAWSPDGKKLAYVSFQNGQAEIFIMNIYTGEREKVTSYPRHNG---- 254

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
              APRFS +G +  + + K  ++ +Y++DL S    ++T     N    + PD   ++F
Sbjct: 255 ---APRFSPDGSKLALVLSKTGSLQVYTLDLNSRKLTQITRGRSNNTEPFWHPDGKSLIF 311

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SDR GK Q+Y +    +  KRI+     +    + +P G  +     S   F +  +  
Sbjct: 312 TSDRGGKPQIYQVDLASNSTKRITWQGSQNLGGQI-TPDGRFLVMVNRSNTGFNLAKLDL 370

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYA 437
           +    ++L +    ++P+ +P+G  +I+S   +      + SID  GR    L  T    
Sbjct: 371 ETGAMQILTKTLLDESPSIAPNGGMVIYSSIYNKTNVLSMVSID--GRFKARLPATNGRV 428

Query: 438 SDPQWVGFM 446
             P W  F+
Sbjct: 429 RAPAWSPFL 437


>gi|212712433|ref|ZP_03320561.1| hypothetical protein PROVALCAL_03527 [Providencia alcalifaciens DSM
           30120]
 gi|212684890|gb|EEB44418.1| hypothetical protein PROVALCAL_03527 [Providencia alcalifaciens DSM
           30120]
          Length = 430

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 177/391 (45%), Gaps = 20/391 (5%)

Query: 39  ATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI-----TN 93
             NSA   P+ +   K+        +V  +V  DL+ S  FN I  +   Q+        
Sbjct: 30  GVNSAQ--PIGVVPFKWAGAGAPPQEVGGIVGADLRNSGKFNPIDPNRMPQQPGTASEVT 87

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK-DRKQIIGKKFFSSPASW- 151
           PD+      W +LG   +V G+V         V ++L DV  +   ++ +  F     W 
Sbjct: 88  PDA------WTALGINAVVVGQVQPAADGSYVVSYQLVDVAANPGAVLAQNQFKVTKDWL 141

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R  AHT SD++++ +TG +G F +RI +V ++   G     L V D DG N ++      
Sbjct: 142 RYAAHTASDEVFEKLTGIRGAFRTRIAYVVKTN-GGQYPYELRVSDYDGFN-QFTVHRSP 199

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           + L  P +SP+ QK+AY T++        ++ T    A +++ +F     AP FS +G +
Sbjct: 200 EPLMSPAWSPDGQKIAYVTFESGS--SALVIQTLSSGAVRQVASFPRHNGAPAFSPDGTK 257

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              ++ K  ++++Y +DL S    ++T+    N   S+ PDS  +V+ SD+ G+ Q+Y M
Sbjct: 258 LAFALSKTGSLNLYVMDLGSGQIRQVTDGRSNNTEPSWMPDSQTLVYTSDQAGRPQIYKM 317

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             NG    R+S +   +  D   SP G  +A     G +  I            L     
Sbjct: 318 NINGGSPVRVSYEGSQNQ-DADVSPDGTFLAMVSSGGGQQHIAKQDLATGNVEYLTSTFL 376

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            + P+ +P+G  +I+S  +   T  +L S D
Sbjct: 377 DETPSIAPNGTMVIYSSSQGLGTILQLVSTD 407


>gi|238757962|ref|ZP_04619143.1| hypothetical protein yaldo0001_8380 [Yersinia aldovae ATCC 35236]
 gi|238703716|gb|EEP96252.1| hypothetical protein yaldo0001_8380 [Yersinia aldovae ATCC 35236]
          Length = 430

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 186/403 (46%), Gaps = 20/403 (4%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K++       ++  +V  DL+ S  FN I      Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEEIGAIVGADLRNSGKFNPIDAARMPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           + +    +     W +LG   +V G+V         V ++L D       I+ +  +   
Sbjct: 79  QPSTAAEVTP-AAWTALGIDAVVVGQVQPSADGSYVVSYQLVDTSGAAGSILAQNQYKVT 137

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R  AHT SD++++ +TG KG F +RI +V ++   G   + L V D DG N +++ 
Sbjct: 138 KQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGKFPHELRVSDYDGYN-QFVV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + A K++ +F     AP FS 
Sbjct: 196 HRSPQPLMSPAWSPDGSKIAYVTF--ESGKSALVIQTLANSAIKQVASFPRHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   S+ PDS  + + SD+ G+ Q
Sbjct: 254 DGTKLAFALSKSGSLNLYVMDLGSGQISQVTDGRSNNTEPSWFPDSQNLAYTSDQGGRPQ 313

Query: 328 LYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +Y +  NG   +RI    SQ++ A       SP G  +     +G    I     +    
Sbjct: 314 VYKVNINGGAPQRITWEGSQNQNADV-----SPDGKFLVLVSSNGGAQHIAKQDLETGAV 368

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           ++L +    + P+ +P+G  +I+S  +    G+ L  +  +GR
Sbjct: 369 QVLTDTFLDETPSIAPNGTMVIYSSTQ--GLGAVLQLVSTDGR 409


>gi|113868785|ref|YP_727274.1| translocation protein TolB [Ralstonia eutropha H16]
 gi|113527561|emb|CAJ93906.1| periplasmic component of the Tol biopolymer transport system
           [Ralstonia eutropha H16]
          Length = 457

 Score =  129 bits (324), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 196/409 (47%), Gaps = 26/409 (6%)

Query: 46  SPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD-VFNLISQDSFKQKITNPDSIPRFQDWN 104
           S + +A   F    +    ++ ++  DL RS  + N+    +   +  N D       W 
Sbjct: 66  SQIPVATANFQGEAQAPQNLTAIIRADLARSGRLRNVDPGGATVAESANVD----LGSWK 121

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S GA   V G V      +  V FRL+D    + + G  F  + +  R  AH I+D IY+
Sbjct: 122 SRGADAFVAGSVTPAAGGKYEVRFRLYDTVKGQSLGGLAFTVNQSQLRVTAHKIADYIYE 181

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            + GE+G F +R+ +VS+  V G  +  L + D DG N +    S + I+  P +SP+  
Sbjct: 182 KLLGERGVFATRLSYVSK--VGG--RYQLLISDSDGQNAQVALTSNEPII-SPSWSPDGA 236

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           +VAY +++ +  + VY+ D     + KR  + N +    AP +S +G+   +++ +D   
Sbjct: 237 RVAYVSFEAKKPV-VYVHDL---ASGKRTLVSNQKGNNSAPSWSPDGRHLALALSRDGNT 292

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD---QK 339
            +Y V+   +   RL+ +  I+    YSPD   I F SDR G  Q+Y M ++G +    +
Sbjct: 293 QVYQVNADGSGIRRLSRSSAIDTEPQYSPDGKSIYFTSDRGGAPQVYRMPASGEEGGGAQ 352

Query: 340 RISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           R++   + SY   P  SP G  +A+   +G  F + +          L + +N +AP+++
Sbjct: 353 RVT--FKGSYNVSPRVSPDGKYLAYISRAG-GFKLQLQDLSNGDVTSLTDTANDEAPSFA 409

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVGFM 446
            +G+ ++++ +  G   + L ++  +GR   +++  +    +P W  FM
Sbjct: 410 ANGKYILYATRVGGR--AVLAAVSTDGRTRQVLSLQSGDVREPSWGPFM 456


>gi|115378912|ref|ZP_01466048.1| protein TolB [Stigmatella aurantiaca DW4/3-1]
 gi|115364091|gb|EAU63190.1| protein TolB [Stigmatella aurantiaca DW4/3-1]
          Length = 366

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 186/365 (50%), Gaps = 29/365 (7%)

Query: 73  LQRSDVFNLISQDSF----KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           L+ S +F ++ + SF    K+ IT   SI  F  W+ +GA+ LV  ++  EG   LR E 
Sbjct: 3   LRASGLFQVLDRASFTADAKEGIT-AGSI-NFTRWSDVGAESLVKVQLGAEGGT-LRGEL 59

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RL++V   ++          +  R++AH ++D +Y+ +T E   F SRI+FV ++  +  
Sbjct: 60  RLFNVGSGREDFKASHAVPTSEPRQLAHFLADALYRHLTREPSPFLSRIVFVRKARDN-- 117

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               +   D DG N R LT     +L  P   P+   VA+ +Y       +YL     + 
Sbjct: 118 --RDVWTADWDGNNARALTTGGINLL--PALGPD-GTVAFTSY-RRGQPDLYLQKEGGEA 171

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISA 307
            P  I     M     FS +GKR   +  + E+  IY  ++  +  +R+T+T + IN S 
Sbjct: 172 RP--IVQNGQMATGVAFSPDGKRIAYAQAQGESTQIYVANVDGSDAKRITDTPYGINSSP 229

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFT-- 364
           S+SPD  ++ F S+R G  Q+YVM  +G++ +R++   + +Y   P WSP+GDLIAFT  
Sbjct: 230 SWSPDGKRLAFVSNRGGSPQIYVMNVDGTNARRLT--FQGNYNQTPDWSPRGDLIAFTAR 287

Query: 365 --KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             + + + F + V    G   RL  + SN + P +SP+GR ++FS  + G    +L+ + 
Sbjct: 288 DERNAFDLFTVNV--DTGKITRLTQDQSNNEEPVFSPNGRLILFSSTRTGT--PQLFVMT 343

Query: 423 LNGRN 427
             G N
Sbjct: 344 AEGNN 348



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 82/168 (48%), Gaps = 10/168 (5%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V + DG++ + +T +   I   P +SP+ +++A+ + +     ++Y+M+     A +R
Sbjct: 205 IYVANVDGSDAKRITDTPYGINSSPSWSPDGKRLAFVS-NRGGSPQIYVMNVDGTNA-RR 262

Query: 253 I---GNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           +   GN+      P +S  G   A  +  +  A D+++V++ +    RLT     N    
Sbjct: 263 LTFQGNYNQT---PDWSPRGDLIAFTARDERNAFDLFTVNVDTGKITRLTQDQSNNEEPV 319

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +SP+   I+F S R G  QL+VM + G++   +   K      P W+P
Sbjct: 320 FSPNGRLILFSSTRTGTPQLFVMTAEGNNPLALPMGKGGG-LTPDWAP 366


>gi|269963138|ref|ZP_06177473.1| translocation protein TolB precursor [Vibrio harveyi 1DA3]
 gi|269832102|gb|EEZ86226.1| translocation protein TolB precursor [Vibrio harveyi 1DA3]
          Length = 450

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 204/461 (44%), Gaps = 47/461 (10%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
           L  + VL+G     +  A   V T+  + + P+++   K+   + L   +S V++ DLQR
Sbjct: 6   LLGMFVLLGSLTSVAHAALELVITDGIDSARPIAVVPFKWEGSEPLPTDISAVIASDLQR 65

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  F+ +      Q   N   +  F  W  LG   L+TG + K  +    V ++L DV  
Sbjct: 66  SGKFSPVPTSKMPQTPFNESEV-NFDAWTGLGVDALLTGSIKKNEQGNYVVNYQLVDVV- 123

Query: 136 RKQIIGKK-----------------FFSSPAS-----WRKIAHTISDDIYQSITGEKGDF 173
           R Q+ G                    F+  A+      R+ AH ISD +Y+ +TGE+G F
Sbjct: 124 RGQLTGGNSKALGGDGELVLSKDHVLFNKVATVEGPRMREYAHRISDLVYEQLTGERGAF 183

Query: 174 NSRILFVSESVVSGI--IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +RI +V   VV+        L V D DG N R +  S+ Q L  P +SP+ QK+AY ++
Sbjct: 184 MTRIAYV---VVNDKDNFPYQLRVADYDGYNERLVLQSK-QPLMSPAWSPDGQKLAYVSF 239

Query: 232 DDED----ILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +      I+ +Y  +  ++   P+  G       APRFS +G +  + + K  ++ +Y+
Sbjct: 240 QNGQAEIFIMNIYTGEREKVTSYPRHNG-------APRFSPDGSQLALVLSKTGSLQVYT 292

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +DL++    ++T     N    + PD   ++F SDR GK Q+Y +        R++    
Sbjct: 293 LDLKTRKLTQITRGRSNNTEPYWHPDGKSLIFTSDRGGKPQIYKVDLGSGSTNRLTWQGS 352

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +    + +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+
Sbjct: 353 QNLGGQI-TPDGRFLVMVNRSDSGFNLAKQDLETGALQVLTKTLLDESPSIAPNGGMVIY 411

Query: 407 SRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           S   +      + SID  GR    L  T      P W  F+
Sbjct: 412 SSIYNKKNVLSMVSID--GRFKARLPATNGRVRAPAWSPFL 450


>gi|86146493|ref|ZP_01064816.1| translocation protein TolB precursor [Vibrio sp. MED222]
 gi|218709110|ref|YP_002416731.1| translocation protein TolB [Vibrio splendidus LGP32]
 gi|254764845|sp|B7VMJ2|TOLB_VIBSL RecName: Full=Protein tolB; Flags: Precursor
 gi|85835756|gb|EAQ53891.1| translocation protein TolB precursor [Vibrio sp. MED222]
 gi|218322129|emb|CAV18243.1| Protein tolB precursor [Vibrio splendidus LGP32]
          Length = 450

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 208/463 (44%), Gaps = 46/463 (9%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           + ++   L+     F   ++   +    NSA   P++I   ++     L   VS V++ D
Sbjct: 5   LLLSFVFLIATSSQFAHAALELVITDGINSAR--PIAIVPFRWEGAGPLPHDVSAVIASD 62

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           LQRS  F+ ++     Q   +   +  F  W +LG   L+TG + K  + +  V ++L D
Sbjct: 63  LQRSGKFSPVATSKMPQTPYSETEV-NFDAWTNLGVDSLLTGSITKNAEGQYVVNYQLID 121

Query: 133 V-------------KDRKQIIGKK---FFSSPAS-----WRKIAHTISDDIYQSITGEKG 171
           +              D  Q++  K    F+  A+      R+ AH ISD +Y+ +TGEKG
Sbjct: 122 IVRGQLTKGQSRALSDEGQLVLSKDHVLFNKKATVPGKRLREYAHRISDLVYEELTGEKG 181

Query: 172 DFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            F +RI +V   VV+   K    L V D DG N R +  S+ Q L  P +SP+ +K+AY 
Sbjct: 182 AFLTRISYV---VVNDKDKYPYQLRVADYDGFNERLVLRSK-QPLMSPAWSPDGKKLAYV 237

Query: 230 TYDDED----ILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++ +      I+ +Y  +  ++   P+  G       APRFS +GK   + + K  ++ +
Sbjct: 238 SFQNGQAEIFIMNIYTGEREKVTSYPRHNG-------APRFSPDGKTLALVLSKTGSLQV 290

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           Y++DL S    ++T     N    + PD   ++F SDR GK Q+Y +  + +   RI+  
Sbjct: 291 YTLDLASRKLTQITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYNVNLSNNSTSRITWQ 350

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
              +    + +P G  +     S   F +     +    ++L +    ++P+ +P+G  +
Sbjct: 351 GSQNLGGQI-TPDGRFLIMVNRSNSGFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGMV 409

Query: 405 IFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           I+S   +      + SID  GR    L  T      P W  F+
Sbjct: 410 IYSSIYNKTNVLSMVSID--GRFKARLPATNGRVRAPSWSPFL 450


>gi|89094843|ref|ZP_01167776.1| TolB, N-terminal:TolB, N-terminal [Oceanospirillum sp. MED92]
 gi|89080898|gb|EAR60137.1| TolB, N-terminal:TolB, N-terminal [Oceanospirillum sp. MED92]
          Length = 436

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 181/399 (45%), Gaps = 49/399 (12%)

Query: 46  SPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNS 105
           +PV++    +     L   ++ +VS DL R+ +F ++ + +        D +  F+DW  
Sbjct: 39  TPVAVVPFSWDGSSALPEDIARIVSADLGRTGLFAMMERKNMLSFPARRDQV-FFRDWRV 97

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
              + LV GR        L VEF L+DV   + ++ ++      + R IAH ISD IY+ 
Sbjct: 98  SNTEFLVIGRQQPAANGELVVEFELYDVLKEQPLLAERVTGRRDNMRGIAHYISDMIYEK 157

Query: 166 ITGEKGDFNSRILFVSESVVS-GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           +TG +G F++RI++V+      G ++  L + D DGA    +    + I+  P +S +  
Sbjct: 158 LTGIRGAFSTRIVYVTAHAFGEGKVRYRLKMADADGARPITIREQSEPIM-SPTWSRDAT 216

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           K+AY +++     R+Y+      +  +R+ +FR +  AP +S +G +  + + KD   +I
Sbjct: 217 KLAYVSFETGKP-RIYIQHLATGKR-ERLPSFRGLNGAPAWSPDGTKLALVLSKDGNPEI 274

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-- 342
           Y  DL+S    R+T+   I+   ++SPD   ++F SDR G+ Q+Y +       +RI+  
Sbjct: 275 YIQDLRSPRLIRVTHHYGIDTEPTWSPDGQSLIFTSDRGGQPQIYRIHLPTRQLERITYE 334

Query: 343 -------------------------------QDKEASYFD----------PVWSPQGDLI 361
                                          QD +    D          P  +P G +I
Sbjct: 335 GNYNSRGRLTLDGRFLAMVHRGNDNVFRIAVQDLKTGRLDVLTDTFLDESPTIAPNGSII 394

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSP 399
            +    G K  +G +  DG+   +L   S +++ P WSP
Sbjct: 395 LYATQKGVKGVLGGVTLDGNVRFILPSASGDVREPAWSP 433



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 26/135 (19%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S ++S D++++ + S   GK ++Y+       ++R+   +  +   P WSP G  +A  
Sbjct: 207 MSPTWSRDATKLAYVSFETGKPRIYIQHLATGKRERLPSFRGLN-GAPAWSPDGTKLAL- 264

Query: 365 KFSGEKFAIGVMKKDGSQE---------RLLVEDSNL---QAPTWSPSGRSLIFSRKKDG 412
                     V+ KDG+ E         RL+    +      PTWSP G+SLIF+  + G
Sbjct: 265 ----------VLSKDGNPEIYIQDLRSPRLIRVTHHYGIDTEPTWSPDGQSLIFTSDRGG 314

Query: 413 DTGSKLYSIDLNGRN 427
               ++Y I L  R 
Sbjct: 315 Q--PQIYRIHLPTRQ 327


>gi|238765245|ref|ZP_04626174.1| hypothetical protein ykris0001_32600 [Yersinia kristensenii ATCC
           33638]
 gi|238696517|gb|EEP89305.1| hypothetical protein ykris0001_32600 [Yersinia kristensenii ATCC
           33638]
          Length = 430

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 187/403 (46%), Gaps = 20/403 (4%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K++       ++  +V  DL+ S  FN I      Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEEIGAIVGADLRNSGKFNPIDAARMPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           + +    +     W +LG   +V G+V         V ++L D       ++ +  +   
Sbjct: 79  QPSTAAEVTP-AAWTALGIDAVVVGQVQPSADGSFVVSYQLVDTSGAAGSVLAQNQYKVT 137

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R  AHT SD++++ +TG KG F +RI +V ++   G   + L V D DG N +++ 
Sbjct: 138 KQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGKFPHELRVSDYDGYN-QFVV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               + L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS 
Sbjct: 196 HRSPEPLMSPAWSPDGSKIAYVTF--ESGKSALVIQTLANGAIRQVASFPRHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   S+ PDS  + + SD+ G+ Q
Sbjct: 254 DGTKLAFALSKSGSLNLYVMDLGSGQISQVTDGRSNNTEPSWFPDSQNLAYTSDQGGRPQ 313

Query: 328 LYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +Y +  NG   +RI    SQ++ A       SP G  +A    +G    I  M       
Sbjct: 314 VYKVNINGGAPQRITWEGSQNQNADV-----SPDGKFLALVSSNGGAQHIAKMDLVTGAV 368

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           ++L +    + P+ +P+G  +I+S  +    G+ L  +  +GR
Sbjct: 369 QVLTDTFLDETPSIAPNGTMVIYSSTQ--GLGAVLQLVSTDGR 409


>gi|90412129|ref|ZP_01220135.1| translocation protein TolB precursor [Photobacterium profundum
           3TCK]
 gi|90326853|gb|EAS43238.1| translocation protein TolB precursor [Photobacterium profundum
           3TCK]
          Length = 448

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 207/464 (44%), Gaps = 53/464 (11%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           + LC+ L+         +   +    +SA   P+ +    +    +L   +S V++ DLQ
Sbjct: 6   MGLCIALLSFSQIAQAELELVITEGVDSAR--PIGVIPFTWEGEGKLPTDISSVIASDLQ 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPR--FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           RS  F+ ++     Q    PDS  +  +  W S+G   LVTG++ K       V ++L D
Sbjct: 64  RSGKFSPVATSKMPQ---TPDSEEQIDYNAWTSMGVDALVTGKITKNADGNYVVNYQLVD 120

Query: 133 V---------------------KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           V                     KD   ++  +        R+ AH ISD +Y+ +TG+KG
Sbjct: 121 VVRGQLTSGESRGLANGELVLTKDH-LLVNNRATVKETRLRQYAHRISDVVYEQLTGDKG 179

Query: 172 DFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            F +RI +V   V+    K+   L V D DG N R +  S+ Q L  P +SP+  K+AY 
Sbjct: 180 AFLTRIAYV---VIDDKSKHPYQLRVADYDGFNERLVLKSQ-QPLMSPAWSPDGSKLAYV 235

Query: 230 TYDDEDILRVYLMD----TR--IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +++++   ++Y+MD    TR  +   P+  G       +PRFS +GK+  I + K  ++ 
Sbjct: 236 SFENQQA-QIYIMDIYKGTRELVTSYPRHNG-------SPRFSPDGKKLAIVLSKTGSLQ 287

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           IY  +L++    ++T+    N  A + PD   ++F SDR G+ Q+Y +    +  KR++ 
Sbjct: 288 IYIKNLETKKLTQITSGRANNTEAFWDPDGKSLIFTSDRGGQPQIYRVNLADNSTKRLTW 347

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
               +    + +P G  +     S   F I          ++L +    ++P+ +P+G  
Sbjct: 348 QGSQNLGGQL-TPDGRYLVMVNRSDTGFNIAKQDLKTGAVQVLTKTFLDESPSIAPNGGM 406

Query: 404 LIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           +I+S   +      L SID  GR    L  T      P W  F+
Sbjct: 407 VIYSSVNNKSNELSLVSID--GRFKARLPTTNGRVRAPSWGPFL 448


>gi|254482467|ref|ZP_05095706.1| Tol-Pal system beta propeller repeat protein TolB [marine gamma
           proteobacterium HTCC2148]
 gi|214037158|gb|EEB77826.1| Tol-Pal system beta propeller repeat protein TolB [marine gamma
           proteobacterium HTCC2148]
          Length = 432

 Score =  129 bits (323), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 190/417 (45%), Gaps = 69/417 (16%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
           PT+I A V  A      +P  IA+               VV  DL RS  F+ +S+    
Sbjct: 35  PTAI-AVVPFAWQGPGTAPEDIAW---------------VVDSDLARSGQFSPVSRSDML 78

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
            + +  + I  ++DW ++ ++ L+ GRV  +G  ++R+E+ L+DV  +KQ        S 
Sbjct: 79  GRPSTQNDI-FYRDWRAIESEYLLIGRVSAQGT-QMRIEYELYDVLRQKQAHKGVEVGSV 136

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLT 207
              R ++H +SD IYQ +TG +G F +R+L+VS + V  G     L + D DGA    L 
Sbjct: 137 NEARMLSHRVSDAIYQKLTGIRGAFATRLLYVSVTRVPGGKDYYRLTLADSDGARPIVLL 196

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDD--EDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            SR+ ++  P +SP+  +++Y +++     I R  L       A +++ NF+ +  AP +
Sbjct: 197 ESREPVM-APGWSPDGTQISYVSFESGRPAIYRQNLSTG----AREQLTNFKGLNGAPAW 251

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G    + + KD + DIY ++L +    R+T    I+   ++ PD   ++F SDR G+
Sbjct: 252 SPDGNTMAMVLSKDGSPDIYLMNLMTKKLTRITRHYAIDTEPTWMPDGRSLMFTSDRGGR 311

Query: 326 EQLY------------VMQSNGSDQKRISQDKE--------------------------- 346
            Q+Y              +   + + R++QD                             
Sbjct: 312 PQIYRYDLRTGTTERVTFEGGYNARARVAQDGRNVVLVHQQNGQFHIALLDLVTNRLQVL 371

Query: 347 -ASYFD--PVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            ++  D  P  +P G ++ + TK +G      V    G + RL   D +++ P WSP
Sbjct: 372 TSTQLDESPSIAPNGSMVLYGTKHAGRGILAAVSVDGGVKFRLPSRDGDVREPAWSP 428


>gi|254506038|ref|ZP_05118182.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus 16]
 gi|219550856|gb|EED27837.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus 16]
          Length = 433

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 192/422 (45%), Gaps = 29/422 (6%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P++I   K+    +L   VS VV+ DLQRS  F+ I+ +   Q   +   +  F  W  L
Sbjct: 19  PIAIVPFKWEGASKLPQDVSAVVASDLQRSGKFSPIATNRMPQTPYSEAEV-NFDAWTGL 77

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDV--------------KDRKQIIGKK--FFSSPAS 150
           G   L+TG + +  +    + ++L DV               D + ++ K    F+  A+
Sbjct: 78  GVDSLLTGTITQNAEGNYVINYQLVDVVRGQLTQGQSKALSPDGQLVLSKDHVLFNKQAT 137

Query: 151 -----WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
                 R+ AH ISD +YQ +TGE+G F +RI +V  +         L V D DG N R 
Sbjct: 138 VPGDRLREYAHRISDLVYQELTGERGAFLTRIAYVVVNDKDQKFPYQLRVSDYDGYNERL 197

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +  S+ Q L  P +SP+ +K+AY ++ +     +Y+M+       +++ ++     APRF
Sbjct: 198 VLRSK-QPLMSPAWSPDGKKLAYVSFQNGQA-EIYIMNIYTGER-EKVTSYPRHNGAPRF 254

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G    + + K  ++ +Y++DL++    ++T     N    + PD   ++F SDR G+
Sbjct: 255 SPDGNSLALVLSKTGSLQVYTLDLKTRKLTQITRGRSNNTEPYWHPDGKSLIFTSDRGGR 314

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            Q+Y +   G    R++     +    + +P G  +     S   F +     +    ++
Sbjct: 315 PQIYQVDLAGGSPNRLTWQGTQNLGGQI-TPDGRFLVMVNRSNAGFNLAKQDLETGAVQI 373

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
           L +    ++P+ +P+G  +I+S   +      + SID  GR    L  T      P W  
Sbjct: 374 LTQTLLDESPSIAPNGGMVIYSSIYNKANVLSMVSID--GRFKARLPATNGRVRAPAWSP 431

Query: 445 FM 446
           F+
Sbjct: 432 FL 433


>gi|323143607|ref|ZP_08078284.1| Tol-Pal system beta propeller repeat protein TolB [Succinatimonas
           hippei YIT 12066]
 gi|322416670|gb|EFY07327.1| Tol-Pal system beta propeller repeat protein TolB [Succinatimonas
           hippei YIT 12066]
          Length = 426

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 197/403 (48%), Gaps = 17/403 (4%)

Query: 50  IAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
           IA   F    ++G  V+ VVS DL RS  F+ +SQ      + + + +         GA+
Sbjct: 35  IAVLPFTQTADVGIDVASVVSADLMRSGKFSPLSQSQIPTGVFDGEKV-NADMMAGTGAE 93

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDV--KDRKQIIGK-KFFSSPASWRKIAHTISDDIYQSI 166
            +V G+V  +G +  +VEF L  +  +++ Q+I   +  S   + R+ AH +SD +Y+ +
Sbjct: 94  AVVFGKVYPDG-NTYQVEFLLQSLVGENKGQVIAHYRGASGLNTMRQAAHRVSDRVYEKL 152

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
            G+KG F +RI +V            L   D DG N   +  S + I+  P +SP+  K+
Sbjct: 153 VGQKGAFRTRIAYVVFRH-GAKFPYQLMTADYDGFNEVPILKSTEPIM-TPSWSPDGTKI 210

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y ++++++   +++ D    +   RI +F+ +  +P +S +G +  + + KD   DIY 
Sbjct: 211 VYVSFENKNSA-IFIQDLNTKQR-TRIASFKGLNSSPAWSPDGSKIAMVLSKDGQPDIYY 268

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D+ + A +R+T    I+   ++S D  Q+ F S+R G+ Q+Y    N    +R++   +
Sbjct: 269 YDVNTRAVQRVTADPAIDTEPNWSADGRQLFFTSERGGRAQIYKFDFNTRTTERLTYQGQ 328

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLI 405
            +           +I  T+ +G  + +  M +DGS    ++  SNL ++P+ +P+G  +I
Sbjct: 329 MNLSAEPIPGTNSVIMITRHNG--YRVARMDEDGSI--YMLTTSNLDESPSVAPNGSMVI 384

Query: 406 FSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFMD 447
           +S    G  G  + S D  GR    L +T    S P W   +D
Sbjct: 385 YSTIYQGRKGLAIVSAD--GRFRANLPSTSGEISSPAWGPLLD 425


>gi|209695365|ref|YP_002263294.1| translocation protein TolB [Aliivibrio salmonicida LFI1238]
 gi|226705863|sp|B6EGK3|TOLB_ALISL RecName: Full=Protein tolB; Flags: Precursor
 gi|208009317|emb|CAQ79583.1| TolB protein precursor, periplasmic component [Aliivibrio
           salmonicida LFI1238]
          Length = 450

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 201/435 (46%), Gaps = 42/435 (9%)

Query: 39  ATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP 98
             NSA   P+ I   K+    +L   +S ++S DLQRS  F+ +  +   Q     D+  
Sbjct: 31  GVNSAR--PIGIVPFKWHGEGKLPQDISAIISSDLQRSGKFSPLPTNKMPQ-TPYKDADI 87

Query: 99  RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK-KFFS----------- 146
            ++ W  +G   +VTG V      +  V ++L DV   +   GK K  S           
Sbjct: 88  NYEAWTKMGVDAIVTGEVKVNAAGKYEVSYKLIDVVRGQLTKGKSKGLSNSGELVLTQDH 147

Query: 147 ---------SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCV 195
                    S    RK AH ISD +Y+ +TGEKG F +RI +V   VV+   ++   L +
Sbjct: 148 ILVNKIATLSKTQLRKYAHRISDVVYEKLTGEKGAFLTRIAYV---VVNDKSQHPYQLRI 204

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N R +  S+  I+  P +SP+ +K+AY ++++    +V++M+    +  + I +
Sbjct: 205 ADYDGYNERLVLKSKQPIM-SPAWSPDGKKLAYVSFENRRS-QVFIMNIYTGKR-ELIAS 261

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           +     APRFS +GK   I + K  ++ +Y V+LQ+    ++T     N    ++PD+  
Sbjct: 262 YPRHNGAPRFSHDGKELAIVLSKTGSLQVYIVNLQTKKMRQITRGRSNNTEPFWAPDNKS 321

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           ++F SDR GK Q+Y +       KR++     +    + +P G  I     S   F +  
Sbjct: 322 LIFTSDRGGKPQIYRVNLEDGSTKRLTWQGSQNLGGQI-TPDGKYIVMVNRSETGFNLAK 380

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS---RKKDGDTGSKLYSIDLNGR-NETLI 431
              +    ++L +    ++P+ +P+G  +I+S   RK++      L  + ++GR    L 
Sbjct: 381 QDLETGAVQVLTKTLLDESPSIAPNGGMVIYSSIYRKQN-----VLSMVSIDGRFKARLP 435

Query: 432 NTPAYASDPQWVGFM 446
            T      P W  F+
Sbjct: 436 ATNGRVRAPAWSPFL 450


>gi|134294844|ref|YP_001118579.1| translocation protein TolB [Burkholderia vietnamiensis G4]
 gi|166229977|sp|A4JBU1|TOLB_BURVG RecName: Full=Protein tolB; Flags: Precursor
 gi|134138001|gb|ABO53744.1| TolB, N-terminal domain protein [Burkholderia vietnamiensis G4]
          Length = 431

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 190/439 (43%), Gaps = 16/439 (3%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           +L  +  +   L+  GG    + +A V V       +   IA   F +   L  +V+ +V
Sbjct: 6   KLGFRALVASCLIAAGG----AANAQVNVLITGVGSTQFPIATANFANEAGLPQQVTSIV 61

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
             DL RS  F  I  D+    +    S+     W + GA   V G V +E   + +V F 
Sbjct: 62  RADLARSGKFTNI--DAGSTPVPETASV-DLGAWKAKGANAFVAGSVNREANGQYKVNFI 118

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++      
Sbjct: 119 LYDTVKQQSLGGLSLTANDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN---- 174

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D    R 
Sbjct: 175 RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPTGRR 232

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              + + +    AP +S +G    +++       IY+V+       RLT +  I+    Y
Sbjct: 233 -YMVSDQKGNNSAPAWSPDGNTLAVALSLTGNTQIYTVNANGGGLRRLTQSSSIDTEPFY 291

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS 367
           SPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+   +
Sbjct: 292 SPDGHWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYISRT 351

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G  F + V          +   +  ++P+++ +G+ ++++ +  G         D +   
Sbjct: 352 GGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYILYATQSGGRNVLAAVPTDGSAPP 411

Query: 428 ETLINTPAYASDPQWVGFM 446
           + L        +P W  FM
Sbjct: 412 QILSVQGGSVREPSWGPFM 430


>gi|238920738|ref|YP_002934253.1| translocation protein TolB [Edwardsiella ictaluri 93-146]
 gi|259533853|sp|C5BEL8|TOLB_EDWI9 RecName: Full=Protein tolB; Flags: Precursor
 gi|238870307|gb|ACR70018.1| Tol-Pal system beta propeller repeat protein TolB, putative
           [Edwardsiella ictaluri 93-146]
          Length = 430

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 192/416 (46%), Gaps = 20/416 (4%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           +  LLVL        +   +    +SA   P+ +   K++        +  +++ DL+ S
Sbjct: 8   MVGLLVLWASVLHAEVRIVITQGVDSAR--PIGVVPFKWMGPGTAPENIGGIIAADLRNS 65

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK-D 135
             FN I      Q+ +    +     W +LG   +V G+V         V ++L D   +
Sbjct: 66  GKFNPIDASRMPQQPSAAAEVSP-AAWTALGIDAVVVGQVQPGADGSYLVSYQLVDTSGN 124

Query: 136 RKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
              ++ +  +     W R  AHT SD++++ +TG KG F +RI +V ++   G     L 
Sbjct: 125 PGSVLVQNQYKVTGQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELR 183

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V D DG N +++     + L  P +SP+  K+AY T+  E      ++ T  + A +++ 
Sbjct: 184 VADYDGYN-QFVVHRSAEPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLSNGAIRQVA 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F     +P FS +G +   ++ K  ++++Y +DL S A  ++T+    N   ++ PDS 
Sbjct: 241 SFPRHNGSPAFSPDGSKLAFALSKTGSLNLYVMDLASGAIRQVTDGRSNNTEPTWFPDSQ 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            + F SD+ G+ Q+Y M  NG   +R+    SQ+++A       SP G  +     S   
Sbjct: 301 NLAFTSDQAGRPQIYKMNINGGVAQRLTWEGSQNQDAEV-----SPDGKFLVMVSSSAGA 355

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             I  +    +  ++L +    + P+ +P+G  +I+S  +    GS L  + ++GR
Sbjct: 356 QHIAKLDLGTNATQVLTDTFLDETPSIAPNGTMVIYSSTQ--GLGSVLQLVSIDGR 409


>gi|254283986|ref|ZP_04958954.1| Tol-Pal system beta propeller repeat protein TolB [gamma
           proteobacterium NOR51-B]
 gi|219680189|gb|EED36538.1| Tol-Pal system beta propeller repeat protein TolB [gamma
           proteobacterium NOR51-B]
          Length = 435

 Score =  128 bits (322), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 203/437 (46%), Gaps = 29/437 (6%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
            L LVL  G    S    +++     N +P+++    +  +      V+ ++  DL RS 
Sbjct: 10  LLALVLSAG---ASAQLQIEINQGVDNPTPIAVVPFGWQGVGTAPDDVARIIDSDLARSG 66

Query: 78  VFNLISQDSFKQKITNPD--SIPRFQDWNSLGAQVLVTGRV--IKEGKDRLRVEFRLWDV 133
            F  +S+   +  ++ PD  S   F+DW +L ++ ++ GRV   + G   +R+E++L+D 
Sbjct: 67  QFAPVSR---RDMLSFPDRASDIYFRDWRALSSEYVLIGRVSGARSGDGPVRIEYQLFDA 123

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS- 192
             + +I       S    R +AH I+D +Y+ +TG  G F +R+L+VS      + +N  
Sbjct: 124 IRQLEIDSGTVSGSVQEIRMLAHQIADAVYERLTGIPGAFATRLLYVS------VTRNPN 177

Query: 193 ------LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L + D DGA    L   RD I+  P +SP+  +VAY +++      +Y  + R 
Sbjct: 178 GKDFYRLVLSDADGARPIVLFEGRDPIM-APSWSPDGSEVAYVSFETSRPA-IYRQNLRT 235

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               +++ NF+ +  +P +S +G    + + KD + DIY ++L S    RLT    I+  
Sbjct: 236 G-VREQLTNFKGLNNSPVWSPDGNSMAMVLSKDGSPDIYLMNLASKKLRRLTRHYAIDTE 294

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-GDLIAFTK 365
            ++ PD   ++F SDR G+ Q+Y    +     R++   E SY       Q G  +A   
Sbjct: 295 PTWMPDGRSLLFTSDRGGRPQIYRYDLSSGQITRVT--FEGSYNARARVAQDGRNVALVH 352

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               ++ I V     S+  +L   S  ++P+ +P+G  ++++ K+D        ++D   
Sbjct: 353 QQNGQYHIAVHDLVTSRLTILTSTSLDESPSIAPNGSIVLYATKRDDKGILGAVAVDGGV 412

Query: 426 RNETLINTPAYASDPQW 442
           R         +  +P W
Sbjct: 413 RFSLPARDGGHVQEPAW 429


>gi|262165948|ref|ZP_06033685.1| TolB protein precursor [Vibrio mimicus VM223]
 gi|262171199|ref|ZP_06038877.1| TolB protein precursor [Vibrio mimicus MB-451]
 gi|261892275|gb|EEY38261.1| TolB protein precursor [Vibrio mimicus MB-451]
 gi|262025664|gb|EEY44332.1| TolB protein precursor [Vibrio mimicus VM223]
          Length = 450

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 209/456 (45%), Gaps = 36/456 (7%)

Query: 17  LCLLLVLIG-GFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           L  +L+LIG GF   +  A   V T+  + + P++I   K+    +L   VS V++ DLQ
Sbjct: 5   LIFVLMLIGTGFTNVANAALELVITDGIDSARPIAIIPFKWEGGTKLPEDVSAVIASDLQ 64

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD-- 132
           RS  F+ +      Q   + + +  F  W SLG   L+TG + +  +    + ++L D  
Sbjct: 65  RSGKFSPVPTSKMPQTPYSEEQV-NFGKWTSLGVDSLLTGTITQNAEGSYVISYQLVDIV 123

Query: 133 ------------------VKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDF 173
                             V  +  ++  K  + P S  R+ AH I+D +Y+ +TGE+G F
Sbjct: 124 RGQLTQGQSKALSPDGQLVLSKDHVLFNKVATVPPSRMREYAHRIADLVYEELTGERGAF 183

Query: 174 NSRILFVSESVVSG--IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +RI +V   VV+        L + D DG N R +  S+ Q L  P +SP+ Q +AY ++
Sbjct: 184 LTRIAYV---VVNDKDPYPYQLRIADYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYVSF 239

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +     +++M+    +  K + +F     APRFS +GK   + + K   + +Y++DL +
Sbjct: 240 QNGQA-EIFMMNIYTGQRDK-LTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLAT 297

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              + +T+    N    + PD   ++F SDR GK Q+Y +  +    KR++     +   
Sbjct: 298 RRLKEVTSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSDGATKRLTWQGSQNLGG 357

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            + +P G  +     S   F +  +  +    ++L +    ++P+ +P+G  +I+S   +
Sbjct: 358 QI-TPDGKFLVMVNRSDSGFNLAKLDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYN 416

Query: 412 GDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
                 + SID  GR    L  T      P W  F+
Sbjct: 417 KANVLSMVSID--GRFKARLPATNGRVRAPAWSPFL 450


>gi|119944498|ref|YP_942178.1| TolB domain-containing protein [Psychromonas ingrahamii 37]
 gi|119863102|gb|ABM02579.1| TolB, N-terminal domain protein [Psychromonas ingrahamii 37]
          Length = 437

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 212/446 (47%), Gaps = 24/446 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +++ L + ++++       +   +    N+A   P+++   K++   E  G  SE+++ D
Sbjct: 3   LRLFLSISMIILSSQASARLEILITEGVNTAR--PIAVIPFKWLGDGEKPGNFSEIIAAD 60

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK-DRLRVEFRLW 131
           LQRS  F+ +  +      +    +  +  W+ +G + L+ G V    +  +  V + L 
Sbjct: 61  LQRSGQFSPLPIEQMPNTPSKSLGL-DYALWHKMGIEALLMGEVSPSPEAGKYIVTYELV 119

Query: 132 DV-------KDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           DV        D   I+  ++   +    R+ AH ISD  Y+ +TGEKG F +RI +++  
Sbjct: 120 DVVAGNANIADYSPILESRRGTVNKTQLRRFAHRISDVAYEKLTGEKGVFLTRIAYIAVD 179

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             S      L + D DG N + +  S+ Q +  P +SP+ +K+AY +++      VY+ D
Sbjct: 180 RKSDY-PYQLRISDYDGYNEKLILRSK-QPIMSPTWSPDGRKLAYVSFEHRRS-EVYIQD 236

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +  + + +F  +  +P +S +GK   I + KD   +IY++++QS A  R+TN   I
Sbjct: 237 LYSQKR-ELMTSFPKINGSPSWSPDGKSLAIVLSKDGQPEIYTLEIQSKALRRITNNRAI 295

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +   ++SPD + + F S R G  Q+Y +       KR++ + + +    +     +L+  
Sbjct: 296 DTEPNWSPDGNSLTFTSTRGGGPQIYQVDLQSKVTKRLTWEGDLNLGGAITPDGANLVLV 355

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           ++  G  + I        + R L +    ++P+ +P+G  +I+S    G  G  L S+D 
Sbjct: 356 SRLDG-NYKIAAQDLASGELRTLTKTHLDESPSVAPNGSMIIYSTVYKGSQGLALVSMD- 413

Query: 424 NGRNETLINTPAYASD---PQWVGFM 446
            GR +   N PA + +   P W  F+
Sbjct: 414 -GRFKA--NIPAQSGEVKSPAWSPFL 436


>gi|117920972|ref|YP_870164.1| translocation protein TolB [Shewanella sp. ANA-3]
 gi|166988085|sp|A0KY89|TOLB_SHESA RecName: Full=Protein tolB; Flags: Precursor
 gi|117613304|gb|ABK48758.1| TolB, N-terminal domain protein [Shewanella sp. ANA-3]
          Length = 442

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 189/398 (47%), Gaps = 25/398 (6%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +++VV  DL RS  F  + +    Q+     +      W ++GA+ +V G V   G D+ 
Sbjct: 54  IADVVMSDLIRSGTFKPLDELGLPQRGIGALAQFDASAWANVGAEAVVVGSVKPYGTDQF 113

Query: 125 RVEFRLWD-VKDRKQII------------GKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
            V F L D VK + Q +             ++   S A +R+  H ISD +Y+ +TG +G
Sbjct: 114 LVSFDLIDLVKAQNQALKGPTSATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGIRG 173

Query: 172 DFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            F +RI +V   VV+   K   SL + D DG N + L  S +  L  P +SP+ +++AY 
Sbjct: 174 AFLTRISYV---VVNHTQKAAYSLMIADYDGYNEQMLLRSPEP-LMSPSWSPDGRRLAYV 229

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +++++    +++ D    +   ++ +F  +  AP FS +GK   +++ KD   +IY +D+
Sbjct: 230 SFENKKA-EIFVQDL-YTQVRTKVSSFPGINGAPTFSPDGKSLAVTLSKDGQPEIYVIDI 287

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            + A +R+TN   I+   S+ PD   ++F S+R G+ QLY +  N     R + + E + 
Sbjct: 288 ATKAAKRITNHYSIDTEPSWYPDGKSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNL 347

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              + +P G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+   
Sbjct: 348 GGSI-TPDGRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTT 406

Query: 410 KDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
             G     L ++  +GR    L         P W  F+
Sbjct: 407 YQGK--QVLAAVSTDGRFKARLPVGQGEVKSPSWSPFL 442


>gi|307728551|ref|YP_003905775.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Burkholderia sp. CCGE1003]
 gi|307583086|gb|ADN56484.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           CCGE1003]
          Length = 430

 Score =  128 bits (321), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 203/442 (45%), Gaps = 23/442 (5%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           +L ++  +   L+ +GG    + +A + V       +   IA   F +      +VS +V
Sbjct: 6   KLGLRTLVASCLIAVGG----AANAQLNVLVTGVGSTQFPIATANFANEANSPQQVSTIV 61

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
            +DLQRS  F  I  D+    +    S+     W + GA   V G V +    +  V F+
Sbjct: 62  RQDLQRSGKFTNI--DAGSAPVPETASV-DLGSWKAKGANAFVAGSVNRLPNGQYEVRFK 118

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V ++      
Sbjct: 119 LYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRGVFATRLSYVIKTGN---- 174

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D DG +  ++  S  + +  P +SP+  KVAY +++ +  + VY+ D    R 
Sbjct: 175 RYQLQISDSDGQDA-HIALSSPEPIISPAWSPDGTKVAYVSFEKKKPI-VYIHDLPTGR- 231

Query: 250 PKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
             RI   + +    AP +S +G+   +++ +     I++V+   +   RLT    I+   
Sbjct: 232 --RIVVADQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTEP 289

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTK 365
           ++SPD   I F SDR G+ Q+Y M + G       +      ++  P  SP G  +A+  
Sbjct: 290 TFSPDGQTIYFTSDRGGQPQIYKMSAQGESAGAAQRVTFTGSYNTSPRVSPDGKQLAYIS 349

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             G  F + +    G     L + ++ ++P+++ +G+ ++++ + +G     L ++  +G
Sbjct: 350 RVGGGFKLYIQDLQGGTATGLTDTTHDESPSFAANGQYILYATQVNGR--GVLAAVSTDG 407

Query: 426 RNETLINTPAYA-SDPQWVGFM 446
           R   +++    +  +P W  FM
Sbjct: 408 RTRQVLSVQGGSVREPSWGPFM 429


>gi|323524838|ref|YP_004226991.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Burkholderia sp. CCGE1001]
 gi|323381840|gb|ADX53931.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           CCGE1001]
          Length = 430

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 202/442 (45%), Gaps = 23/442 (5%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           +L ++  +   L+ +GG    + +A + V       +   IA   F +      +VS +V
Sbjct: 6   KLGLRTLVASCLIAVGG----AANAQLNVLVTGVGSTQFPIATANFANEANSPQQVSTIV 61

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
            +DLQRS  F  I  D+    +    S+     W + GA   V G V +    +  V F+
Sbjct: 62  RQDLQRSGKFTNI--DAGSAPVPETASV-DLGSWKAKGANAFVAGSVNRLPNGQYEVRFK 118

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V ++      
Sbjct: 119 LYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRGVFATRLSYVIKTGN---- 174

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D DG +  ++  S  + +  P +SP+  KVAY +++ +  + VY+ D    R 
Sbjct: 175 RYQLQISDSDGQDA-HIALSSPEPIISPAWSPDGTKVAYVSFEKKKPI-VYIHDLPTGR- 231

Query: 250 PKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
             RI   + +    AP +S +G+   +++ +     I++V+       RLT    I+   
Sbjct: 232 --RIVVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGTGLRRLTQGSSIDTEP 289

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTK 365
           ++SPD   I F SDR G+ Q+Y M + G       +      ++  P  SP G  +A+  
Sbjct: 290 TFSPDGQTIYFTSDRGGQPQIYKMSAQGESAGAAQRVTFTGSYNTSPRVSPDGKQLAYIS 349

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             G  F + +    G     L + ++ ++P+++ +G+ ++++ + +G     L ++  +G
Sbjct: 350 RVGGAFKLYIQDLQGGTATGLTDTTHDESPSFAANGQYILYATQVNGR--GVLAAVSTDG 407

Query: 426 RNETLINTPAYA-SDPQWVGFM 446
           R   +++    +  +P W  FM
Sbjct: 408 RTRQVLSVQGGSVREPSWGPFM 429


>gi|261211900|ref|ZP_05926187.1| TolB protein precursor [Vibrio sp. RC341]
 gi|260839250|gb|EEX65882.1| TolB protein precursor [Vibrio sp. RC341]
          Length = 450

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 207/456 (45%), Gaps = 36/456 (7%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           L  +L+LIG    +  +A +++       +  P++I   K+    +L   +S V++ DLQ
Sbjct: 5   LVFILMLIGTSMTSVANAALELVITDGIDSARPIAIIPFKWEGGTKLPEDISGVIASDLQ 64

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD-- 132
           RS  F+ +      Q   + + +  F  W SLG   L+TG + +  +    + ++L D  
Sbjct: 65  RSGKFSPVPTSKMPQTPYSEEQV-NFGKWTSLGVDSLLTGTITQNAEGSYVISYQLVDIV 123

Query: 133 ------------------VKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDF 173
                             V  +  ++  K  + PAS  R+ AH I+D +Y+ +TGE+G F
Sbjct: 124 RGQLTQGQSKALSSDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGAF 183

Query: 174 NSRILFVSESVVSG--IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +RI +V   VV+        L + D DG N R +  S+ Q L  P +SP+ Q +AY ++
Sbjct: 184 LTRIAYV---VVNDKDPYPYQLRISDYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYVSF 239

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +     +Y+M+    +  K + +F     APRFS +GK   + + K   + +Y++DL +
Sbjct: 240 QNGQA-EIYMMNIYSGQRDK-LTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLAT 297

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              + +T+    N    + PD   ++F SDR GK Q+Y +  +    KRI+     +   
Sbjct: 298 RRLKEVTDGRANNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSDGATKRITWQGSQNLGG 357

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            + +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S   +
Sbjct: 358 QI-TPDGKFLVMVNRSDSGFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYN 416

Query: 412 GDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
                 + SID  GR    L  T      P W  F+
Sbjct: 417 KANVLSMVSID--GRFKARLPATNGRVRAPAWSPFL 450


>gi|221201006|ref|ZP_03574046.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           multivorans CGD2M]
 gi|221206542|ref|ZP_03579555.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           multivorans CGD2]
 gi|221214396|ref|ZP_03587367.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           multivorans CGD1]
 gi|221165653|gb|EED98128.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           multivorans CGD1]
 gi|221173851|gb|EEE06285.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           multivorans CGD2]
 gi|221178856|gb|EEE11263.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           multivorans CGD2M]
          Length = 431

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 192/442 (43%), Gaps = 16/442 (3%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G    ++ +A V V       +   IA   F +   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAG----SAANAQVNVLITGVGSTQFPIATANFANEAGLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I  D+    +    S+     W + GA   V G V +EG  + ++
Sbjct: 59  SIVRADLARSGKFTNI--DAGSTPVPETASV-DLGAWKAKGANAFVAGSVNREGNGQYKI 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++   
Sbjct: 116 NFILYDTVKQQSLGGLSLSANDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G    +++       IYSV+       RLT +  I+  
Sbjct: 230 GRR-YMVSDQKGNNSAPAWSPDGNTLAVALSLTGNTQIYSVNSNGGGLRRLTQSSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFT 364
             YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+ 
Sbjct: 289 PFYSPDGHWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYI 348

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +G  F + V          +   +  ++P+++ +G+ ++++ +  G         D +
Sbjct: 349 SRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYILYATQSGGRNVLAAVPSDGS 408

Query: 425 GRNETLINTPAYASDPQWVGFM 446
              + L        +P W  FM
Sbjct: 409 APPQILSVQGGSVREPSWGPFM 430


>gi|170691331|ref|ZP_02882496.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           graminis C4D1M]
 gi|170143536|gb|EDT11699.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           graminis C4D1M]
          Length = 430

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 202/442 (45%), Gaps = 23/442 (5%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           +L ++  +   L+  GG    + +A + V       +   IA   F +      +VS +V
Sbjct: 6   KLGLRTLVASCLIAAGG----AANAQLNVLVTGVGSTQFPIATANFANEANSPQQVSTIV 61

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
            +DLQRS  F  I  D+    +    S+     W + GA   V G V +    +  V F+
Sbjct: 62  RQDLQRSGKFTNI--DAGSAPVPETASV-DLGSWKAKGANAFVAGSVNRLPNGQYEVRFK 118

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V +S      
Sbjct: 119 LYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRGAFATRLSYVIKSGN---- 174

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D DG +  ++  S  + +  P +SP+  KVAY +++ +  + VY+ D    R 
Sbjct: 175 RYQLQISDSDGQDA-HIALSSPEPIISPAWSPDGTKVAYVSFEKKKPI-VYIHDLPTGR- 231

Query: 250 PKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
             RI   + +    AP +S +G+   +++ +     I++V+   +   RLT    I+   
Sbjct: 232 --RIVVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTEP 289

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTK 365
           ++SPD   I F SDR G+ Q+Y M + G       +      ++  P  SP G  +A+  
Sbjct: 290 TFSPDGQSIYFTSDRGGQPQIYKMSAQGESAGGAQRVTFTGSYNTSPRVSPDGKQLAYIS 349

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             G  F + +    G     L + ++ ++P+++ +G+ ++++ + +G     L ++  +G
Sbjct: 350 RVGGGFKLYIQDLQGGTATGLTDTTHDESPSFAANGQYILYATQVNGR--GVLAAVSTDG 407

Query: 426 RNETLINTPAYA-SDPQWVGFM 446
           R   +++    +  +P W  FM
Sbjct: 408 RTRQVLSVQGGSVREPSWGPFM 429


>gi|52841801|ref|YP_095600.1| TolB colicin import protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|67461928|sp|Q5ZV69|TOLB_LEGPH RecName: Full=Protein tolB; Flags: Precursor
 gi|52628912|gb|AAU27653.1| TolB colicin import protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 419

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 117/410 (28%), Positives = 193/410 (47%), Gaps = 30/410 (7%)

Query: 46  SPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNS 105
           S + IA   F S +    ++  V+  DL  S  F +IS     Q   +  S+   +    
Sbjct: 30  SALPIAINSFGS-NAAAQEIGNVIENDLTISGQFKIISG---PQGANSQSSVSTLRQ--- 82

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQ 164
           LGA  +VTGRV + G +R+ V F L D      I+  K F   A+  R +AH ISD++YQ
Sbjct: 83  LGADSVVTGRVNQVG-NRIEVSFTLADAVANGNILLTKTFQINANQVRALAHHISDEVYQ 141

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +TGE+G F++RI ++S     G  + SL V D DG N + L  S + I+  P +SPN +
Sbjct: 142 KLTGERGIFSTRIAYISVQRNGGRSRYSLEVADADGHNPQSLLVSSEPIM-SPSWSPNGK 200

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            ++Y +++ +   +  +    ++   +R I +F  +  AP +S +G+   + + K     
Sbjct: 201 SISYVSFEKK---KAEIFTVSVETGQRRLITSFPGINGAPAWSPDGQHLAVVLSKSGTPK 257

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS- 342
           IY VDL S + ++LT    I+    YSPD   ++F S R G  Q+Y +        R++ 
Sbjct: 258 IYDVDLSSGSMKQLTFGNSIDTEPRYSPDGRSLLFTSGRGGSPQVYRLSLADGQISRVTF 317

Query: 343 ---QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
               +  ASY     +P    I        +F IGV    G     L      ++P+ SP
Sbjct: 318 EGNYNARASY-----TPDMKHIVMLHREDRQFNIGVQNTGGGPISNLTFSGLDESPSVSP 372

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFM 446
           + R ++++ +   D G  L  + ++GR    +  PA   D   P W  ++
Sbjct: 373 NSRLVLYATRYQ-DRG-VLGIVSIDGR--IRMRLPAREGDVQEPAWSPYL 418


>gi|22126931|ref|NP_670354.1| translocation protein TolB [Yersinia pestis KIM 10]
 gi|45440866|ref|NP_992405.1| translocation protein TolB [Yersinia pestis biovar Microtus str.
           91001]
 gi|51595503|ref|YP_069694.1| translocation protein TolB [Yersinia pseudotuberculosis IP 32953]
 gi|108806599|ref|YP_650515.1| translocation protein TolB [Yersinia pestis Antiqua]
 gi|108813034|ref|YP_648801.1| translocation protein TolB [Yersinia pestis Nepal516]
 gi|145599837|ref|YP_001163913.1| translocation protein TolB [Yersinia pestis Pestoides F]
 gi|149366876|ref|ZP_01888910.1| TolB colicin import protein [Yersinia pestis CA88-4125]
 gi|153948506|ref|YP_001401831.1| translocation protein TolB [Yersinia pseudotuberculosis IP 31758]
 gi|162418362|ref|YP_001605922.1| translocation protein TolB [Yersinia pestis Angola]
 gi|165924647|ref|ZP_02220479.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938286|ref|ZP_02226844.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166011590|ref|ZP_02232488.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166211563|ref|ZP_02237598.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167399720|ref|ZP_02305238.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167419672|ref|ZP_02311425.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424139|ref|ZP_02315892.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|170025178|ref|YP_001721683.1| translocation protein TolB [Yersinia pseudotuberculosis YPIII]
 gi|186894556|ref|YP_001871668.1| translocation protein TolB [Yersinia pseudotuberculosis PB1/+]
 gi|218928292|ref|YP_002346167.1| translocation protein TolB [Yersinia pestis CO92]
 gi|229841061|ref|ZP_04461220.1| periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229843165|ref|ZP_04463311.1| periplasmic protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229894002|ref|ZP_04509188.1| periplasmic protein [Yersinia pestis Pestoides A]
 gi|229903474|ref|ZP_04518587.1| periplasmic protein [Yersinia pestis Nepal516]
 gi|270487254|ref|ZP_06204328.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           KIM D27]
 gi|294503129|ref|YP_003567191.1| translocation protein TolB precursor [Yersinia pestis Z176003]
 gi|32699710|sp|Q8ZGZ1|TOLB_YERPE RecName: Full=Protein tolB; Flags: Precursor
 gi|67461941|sp|Q66D90|TOLB_YERPS RecName: Full=Protein tolB; Flags: Precursor
 gi|118574601|sp|Q1CAF2|TOLB_YERPA RecName: Full=Protein tolB; Flags: Precursor
 gi|118574602|sp|Q1CFM9|TOLB_YERPN RecName: Full=Protein tolB; Flags: Precursor
 gi|166229995|sp|A4TNS8|TOLB_YERPP RecName: Full=Protein tolB; Flags: Precursor
 gi|166988087|sp|A7FKQ3|TOLB_YERP3 RecName: Full=Protein tolB; Flags: Precursor
 gi|226705901|sp|B2K8G1|TOLB_YERPB RecName: Full=Protein tolB; Flags: Precursor
 gi|226705902|sp|A9R2G2|TOLB_YERPG RecName: Full=Protein tolB; Flags: Precursor
 gi|226705903|sp|B1JG47|TOLB_YERPY RecName: Full=Protein tolB; Flags: Precursor
 gi|21959970|gb|AAM86605.1|AE013906_9 periplasmic protein [Yersinia pestis KIM 10]
 gi|45435724|gb|AAS61282.1| TolB colicin import protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51588785|emb|CAH20399.1| TolB colicin import protein [Yersinia pseudotuberculosis IP 32953]
 gi|108776682|gb|ABG19201.1| TolB colicin import protein [Yersinia pestis Nepal516]
 gi|108778512|gb|ABG12570.1| TolB colicin import protein [Yersinia pestis Antiqua]
 gi|115346903|emb|CAL19790.1| TolB colicin import protein [Yersinia pestis CO92]
 gi|145211533|gb|ABP40940.1| TolB colicin import protein [Yersinia pestis Pestoides F]
 gi|149291250|gb|EDM41325.1| TolB colicin import protein [Yersinia pestis CA88-4125]
 gi|152960001|gb|ABS47462.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351177|gb|ABX85125.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           Angola]
 gi|165913664|gb|EDR32283.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165923707|gb|EDR40839.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165989538|gb|EDR41839.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207334|gb|EDR51814.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962413|gb|EDR58434.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050428|gb|EDR61836.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167056988|gb|EDR66751.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169751712|gb|ACA69230.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia
           pseudotuberculosis YPIII]
 gi|186697582|gb|ACC88211.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia
           pseudotuberculosis PB1/+]
 gi|229679244|gb|EEO75347.1| periplasmic protein [Yersinia pestis Nepal516]
 gi|229689512|gb|EEO81573.1| periplasmic protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229697427|gb|EEO87474.1| periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229703887|gb|EEO90900.1| periplasmic protein [Yersinia pestis Pestoides A]
 gi|262361165|gb|ACY57886.1| translocation protein TolB precursor [Yersinia pestis D106004]
 gi|262365278|gb|ACY61835.1| translocation protein TolB precursor [Yersinia pestis D182038]
 gi|270335758|gb|EFA46535.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           KIM D27]
 gi|294353588|gb|ADE63929.1| translocation protein TolB precursor [Yersinia pestis Z176003]
 gi|320014264|gb|ADV97835.1| periplasmic protein [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 430

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 187/403 (46%), Gaps = 20/403 (4%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K++       ++  +V  DL+ S  FN I      Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEEIGAIVGADLRNSGKFNPIDAARMPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           + +    +     W +LG   +V G+V         V ++L D       I+ +  +   
Sbjct: 79  QPSTAAEVTP-AAWTALGIDAVVVGQVQPSADGSYVVSYQLVDTSGSAGSILAQNQYKVT 137

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R  AHT+SD++++ +TG KG F +RI +V ++   G   + L V D DG N +++ 
Sbjct: 138 KQWLRYSAHTVSDEVFEKLTGIKGAFRTRIAYVVKTN-GGKFPHELRVSDYDGYN-QFVV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               + L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS 
Sbjct: 196 HRSPEPLMSPAWSPDGSKIAYVTF--ESGKSALVIQTLANGAIRQVASFPRHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   S+ PDS  + + SD+ G+ Q
Sbjct: 254 DGTKLAFALSKSGSLNLYVMDLASGQISQVTDGRSNNTEPSWFPDSQNLAYTSDQGGRPQ 313

Query: 328 LYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +Y +  NG   +RI    SQ++ A       SP G  +     +G    I     +    
Sbjct: 314 VYKVNINGGVPQRITWEGSQNQNADV-----SPDGKFLVLVSSNGGAQHIAKQDLETGAV 368

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           ++L +    + P+ +P+G  +I+S  +    GS L  +  +GR
Sbjct: 369 QVLTDTLLDETPSIAPNGTMVIYSSTQ--GLGSVLQLVSTDGR 409


>gi|218780986|ref|YP_002432304.1| hypothetical protein Dalk_3146 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762370|gb|ACL04836.1| WD40 domain protein beta Propeller [Desulfatibacillum alkenivorans
           AK-01]
          Length = 442

 Score =  127 bits (320), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 174/349 (49%), Gaps = 22/349 (6%)

Query: 100 FQDWNSLGAQVLVTGRV-IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI 158
           F +W S+GA  LVTG + +++G   L +E RL+DV   + I+GK++       RK+    
Sbjct: 103 FANWVSIGADHLVTGGLDLRDGV--LVLELRLFDVPRNRLIVGKRYKGRVEDMRKMIRRF 160

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
             +I   +T  +G F ++I FVS    +G     +   + DG + + LT S  +I   P 
Sbjct: 161 CVEIVTELTDSRGVFGTKIAFVS----NGPGNKEIFACEYDGFDPQQLT-SGSKIALSPA 215

Query: 219 FSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +S +   +AY +Y D   E  +R       +  A K I N        RF+     A +S
Sbjct: 216 WSGDGTHMAYVSYADGPPEIFIRNLAQKRGVKVAYKGI-NVTPAWDPTRFA---LAATLS 271

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +  D+  +IYS+       ++LTN   I++S SYSPD  ++ F S+R G  Q+Y+M+ + 
Sbjct: 272 LNGDQ--EIYSLTGNGKIIKKLTNNWGIDVSPSYSPDGKRMAFVSNRGGSPQIYIMELDT 329

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQA 394
               R++ D + +   P +SP+GD IA+       F +  ++ DG+  +RL     + + 
Sbjct: 330 GQTSRVTFDGKYNS-APAFSPRGDRIAYCGMVDGTFDVFTVRTDGTDLQRLTDHPGDDEE 388

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQW 442
           P+WSP G  + FS  ++G   +K+Y +  +G ++  L+      + P W
Sbjct: 389 PSWSPDGTLIAFSTTREGK--AKIYVMTSHGTDQRKLLELEGAQTQPAW 435



 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 75/142 (52%), Gaps = 7/142 (4%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKRALI 274
           P +SP+ +++A+ + +     ++Y+M+    +  +    G + S   AP FS  G R   
Sbjct: 301 PSYSPDGKRMAFVS-NRGGSPQIYIMELDTGQTSRVTFDGKYNS---APAFSPRGDRIAY 356

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               D   D+++V       +RLT+    +   S+SPD + I F + REGK ++YVM S+
Sbjct: 357 CGMVDGTFDVFTVRTDGTDLQRLTDHPGDDEEPSWSPDGTLIAFSTTREGKAKIYVMTSH 416

Query: 335 GSDQKRISQDKEASYFDPVWSP 356
           G+DQ+++  + E +   P WSP
Sbjct: 417 GTDQRKL-LELEGAQTQPAWSP 437


>gi|28897834|ref|NP_797439.1| translocation protein TolB [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838026|ref|ZP_01990693.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus AQ3810]
 gi|260361765|ref|ZP_05774790.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus K5030]
 gi|260876994|ref|ZP_05889349.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus AN-5034]
 gi|260899065|ref|ZP_05907506.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus Peru-466]
 gi|260900754|ref|ZP_05909149.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus AQ4037]
 gi|32699696|sp|Q87QT9|TOLB_VIBPA RecName: Full=Protein tolB; Flags: Precursor
 gi|28806047|dbj|BAC59323.1| TolB protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|149748560|gb|EDM59419.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus AQ3810]
 gi|308089165|gb|EFO38860.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus Peru-466]
 gi|308093918|gb|EFO43613.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus AN-5034]
 gi|308110191|gb|EFO47731.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus AQ4037]
 gi|308113266|gb|EFO50806.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus K5030]
          Length = 450

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 205/461 (44%), Gaps = 47/461 (10%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
           L  + VL+G     +  A   V T+  + + P+++   K+     L   +S V++ DLQR
Sbjct: 6   LLGMFVLLGSLTNVAHAALELVITDGIDSARPIAVVPFKWEGSQPLPTDISAVIASDLQR 65

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  F+ +  +   Q   N   +  F  W SLG   L+TG + +  +    V ++L DV  
Sbjct: 66  SGKFSPVPTNKMPQTPFNESEV-NFDSWTSLGVDALLTGSIKQNEQGDYVVNYQLVDVV- 123

Query: 136 RKQIIGKK-----------------FFSSPAS-----WRKIAHTISDDIYQSITGEKGDF 173
           R Q+ G +                  F+  A+      R+ AH ISD +Y+ +TGE+G F
Sbjct: 124 RGQLTGGQSKALGSDGELVLSKDHVLFNKVATVKGPRMREYAHRISDLVYEQLTGERGAF 183

Query: 174 NSRILFVSESVVSGI--IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +RI +V   VV+        L V D DG N R +  S+ Q L  P +SP+ QK+AY ++
Sbjct: 184 MTRIAYV---VVNDKDRFPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGQKLAYVSF 239

Query: 232 DDED----ILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +      I+ +Y  +  +I   P+  G       APRFS +G +  + + K   + +Y+
Sbjct: 240 QNGQAEIFIMNIYTGEREKITSYPRHNG-------APRFSPDGNKLALVLSKTGTLQVYT 292

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            DL++    ++T +   N    + PD   ++F SDR GK Q+Y +        R++    
Sbjct: 293 FDLKTRKLTQITRSRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLGSGSIDRLTWQGS 352

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +    + +P G  +     S   F +     +    ++L +    ++P+ +P+G  +++
Sbjct: 353 QNLGGQI-TPDGRFLVMVNRSDSGFNLAKQDLETGALQVLTKTLLDESPSIAPNGGMVVY 411

Query: 407 SRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           S   +      + SID  GR    L  T      P W  F+
Sbjct: 412 SSIYNKKNVLSMVSID--GRFKARLPATNGRVRAPAWSPFL 450


>gi|161504090|ref|YP_001571202.1| translocation protein TolB [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160865437|gb|ABX22060.1| hypothetical protein SARI_02188 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 434

 Score =  127 bits (319), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 183/415 (44%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN + +    Q
Sbjct: 23  LHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQ 82

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           +      + +   W++LG   +V G+V         V ++L D       ++ +  +   
Sbjct: 83  QPATAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVN 141

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++ 
Sbjct: 142 KQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVV 199

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS 
Sbjct: 200 HRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNGAPAFSP 257

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q
Sbjct: 258 DGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQ 317

Query: 328 LYVMQSNGSDQKRI----SQDKEA------------------------------------ 347
           +Y M  NG   +RI    SQ+++A                                    
Sbjct: 318 VYKMNINGGAAQRITWEGSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSS 377

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 378 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 432


>gi|268590336|ref|ZP_06124557.1| Tol-Pal system beta propeller repeat protein TolB [Providencia
           rettgeri DSM 1131]
 gi|291314245|gb|EFE54698.1| Tol-Pal system beta propeller repeat protein TolB [Providencia
           rettgeri DSM 1131]
          Length = 430

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 184/393 (46%), Gaps = 24/393 (6%)

Query: 39  ATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI-TNPDSI 97
             NSA   P+ +   K+        +V ++V  DL+ S  FN I      Q+  T  + I
Sbjct: 30  GVNSAQ--PIGVVPFKWSGAGAPPQEVGQIVGADLRNSGKFNPIEPSRMPQQPGTASEVI 87

Query: 98  PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK-DRKQIIGKKFFSSPASW-RKIA 155
           P  + W +LG   +V G+V         V ++L DV  +   ++ +  +     W R  A
Sbjct: 88  P--EAWTALGINAVVVGQVQPAADGSFVVSYQLVDVAANPGAVLSQNQYKVTKEWLRYAA 145

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVS--GIIKNSLCVMDRDGANIRYLTPSRDQI 213
           HT SD++++ +TG +G F +RI ++   VV+  G     L V D DG N ++      + 
Sbjct: 146 HTASDEVFEKLTGIRGAFRTRIAYI---VVNKGGQYPYELRVSDYDGFN-QFTVHRSPEP 201

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           L  P +SP+ +K+AY T++        ++ T    A +++ +F     AP FS +G +  
Sbjct: 202 LMSPAWSPDGEKLAYVTFESGS--SALVIQTLSTGAVRQVASFPRHNGAPAFSPDGTKLA 259

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            ++ K  ++++Y +DL S    ++T+    N   S+ PDS  +V+ SD+ G+ Q+Y M  
Sbjct: 260 FALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPSWMPDSQTLVYTSDQAGRPQIYKMNI 319

Query: 334 NGSDQKRIS----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           NG   +R+S    Q+++A       SP G  +      G +  +       +    L + 
Sbjct: 320 NGGSPERVSWEGTQNQDADV-----SPDGTFLVMVSSGGGQQHVAKQDLATNNVEFLTKT 374

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + P+ +P+G  +I+S  +   T  +L S D
Sbjct: 375 FLDETPSIAPNGTMVIYSSSQGLGTILQLVSTD 407


>gi|167554282|ref|ZP_02348023.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205321483|gb|EDZ09322.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
          Length = 431

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 184/415 (44%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN + +    Q
Sbjct: 20  LHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQ 79

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           +      + +   W++LG   +V G+V         V ++L D       ++ +  +   
Sbjct: 80  QPATAQEV-QPTAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVN 138

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R  +HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++ 
Sbjct: 139 KQWLRYASHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVV 196

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS 
Sbjct: 197 HRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNGAPAFSP 254

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q
Sbjct: 255 DGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQ 314

Query: 328 LYVMQSNGSDQKRI----SQDKEA------------------------------------ 347
           +Y M  NG   +RI    SQ+++A                                    
Sbjct: 315 VYKMNINGGAAQRITWEGSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSS 374

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 375 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 429


>gi|269103008|ref|ZP_06155705.1| TolB protein precursor [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268162906|gb|EEZ41402.1| TolB protein precursor [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 449

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 209/464 (45%), Gaps = 51/464 (10%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           + LCL+L+ +  F    +   +    +SA   P+++   K+    +L   +S VV+ DLQ
Sbjct: 6   MGLCLMLLTVSQFARAELELVITDGVDSAR--PIAVVPFKWEGQGKLPTDISAVVASDLQ 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD-V 133
           RS  F+ +      Q+ ++   I  +  W  +G   LV G V ++      V+++L D V
Sbjct: 64  RSGKFSPVPVAKMPQQPSDESQI-NYNAWTQMGVDALVMGTVSQDANGNYVVQYQLIDLV 122

Query: 134 KDRKQ-------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           K + Q                   ++  +    P   R+ AH ISD +YQ +TGE+G F 
Sbjct: 123 KGQLQSKQTTADANGQVVTEKNYILVNNRATVKPNRLRQYAHRISDVVYQKLTGERGAFL 182

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +RI +V+    S      L V D DG N R +  S+ Q +  P +SP+  K+AY ++++ 
Sbjct: 183 TRIAYVAMEEKSKF-PYQLRVADYDGYNERTVLKSQ-QPIMSPAWSPDGSKLAYVSFENN 240

Query: 235 DILRVYLMD----TR--IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
              ++Y+M+    TR  +   P+  G       +PRFS +G +  + + K  ++ IY  D
Sbjct: 241 KA-QIYIMNIYKGTRELVSDYPRHNG-------SPRFSPDGSKLALVLSKSGSLQIYIKD 292

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEA 347
           L +    ++T     N    + P  + ++F SDR GK Q+Y V  ++G  Q+   Q  + 
Sbjct: 293 LNTKQLTQVTRGRANNTEPFWDPTGNSLIFTSDRGGKPQIYRVNLADGQTQRLTWQGSQN 352

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                  +P G  +     S   + I          ++L +    ++P+ +P+G  +I+S
Sbjct: 353 --LGGQLTPDGRYLVMVNRSDTGYNIAKQDLKTGAVQVLTKTFLDESPSIAPNGSMIIYS 410

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASD----PQWVGFMD 447
                     L SID  GR +  + +   ASD    P W  F++
Sbjct: 411 SSIGNSNELSLVSID--GRFKARLPS---ASDRVRSPAWGPFLN 449


>gi|326622474|gb|EGE28819.1| translocation protein TolB precursor [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326627053|gb|EGE33396.1| translocation protein TolB precursor [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 434

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 183/415 (44%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN + +    Q
Sbjct: 23  LHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQ 82

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           +      + +   W++LG   +V G+V         V ++L D       ++ +  +   
Sbjct: 83  QPATAQEV-QPTAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVN 141

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++ 
Sbjct: 142 KQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVV 199

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS 
Sbjct: 200 HRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNGAPAFSP 257

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q
Sbjct: 258 DGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQ 317

Query: 328 LYVMQSNGSDQKRI----SQDKEA------------------------------------ 347
           +Y M  NG   +RI    SQ+++A                                    
Sbjct: 318 VYKMNINGGAAQRITWEGSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSS 377

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 378 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 432


>gi|206575815|ref|YP_002239638.1| Tol-Pal system beta propeller repeat protein TolB [Klebsiella
           pneumoniae 342]
 gi|290510464|ref|ZP_06549834.1| tol-Pal system beta propeller repeat protein TolB [Klebsiella sp.
           1_1_55]
 gi|226705885|sp|B5XZC1|TOLB_KLEP3 RecName: Full=Protein tolB; Flags: Precursor
 gi|206564873|gb|ACI06649.1| Tol-Pal system beta propeller repeat protein TolB [Klebsiella
           pneumoniae 342]
 gi|289777180|gb|EFD85178.1| tol-Pal system beta propeller repeat protein TolB [Klebsiella sp.
           1_1_55]
          Length = 430

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 181/415 (43%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   ++         V  +V+ DL+ S  FN + +    Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFQWAGQGAAPEDVGGIVAADLRNSGKFNPLDRSRLPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK--QIIGKKFFSS 147
           + T+   + +   W++LG   +V G+V        +V ++L D        +    F  +
Sbjct: 79  QPTSAQEV-QPAAWSALGIDAVVVGQVTSNPDGSYQVAYQLVDTGGAPGTTLAQGSFKVT 137

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
               R  AH  SD +++ +TG KG F +RI +V +    G     L V D DG N ++L 
Sbjct: 138 KQYLRYAAHAASDAVFEKLTGIKGAFRTRIAYVVQKN-GGQFPYELRVSDYDGYN-QFLV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + A ++I +F     AP FS 
Sbjct: 196 HRSSQPLMSPAWSPDGSKLAYVTF--ESGRSALVVQTLANGAVRQIASFPQHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++TN    N   S+ PDS  + F SD+ G+ Q
Sbjct: 254 DGSKLAFALSKTGSLNLYVMDLGSGQIRQVTNGRSNNTEPSWFPDSQNLAFTSDQAGRPQ 313

Query: 328 LYVMQSNGSDQKRIS--------------------------------QDKEA-------- 347
           +Y +  NG   +RI+                                QD EA        
Sbjct: 314 VYKVNINGGTPQRITWEGSQNQDADVSADGKTMVMVSSAGGQQHIAKQDLEAGGVQVLSS 373

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 374 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 428


>gi|153820467|ref|ZP_01973134.1| tolB protein [Vibrio cholerae NCTC 8457]
 gi|126508988|gb|EAZ71582.1| tolB protein [Vibrio cholerae NCTC 8457]
          Length = 382

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 175/351 (49%), Gaps = 32/351 (9%)

Query: 17  LCLLLVLIG-GFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           L  +L+LIG GF   +  A   V T+  + + P++I   K+    +L   VS V++ DLQ
Sbjct: 5   LVFVLMLIGTGFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIASDLQ 64

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV- 133
           RS  F+ +      Q   + + +  F  W S+G   L+TG + +  +    + ++L D+ 
Sbjct: 65  RSGKFSPVPTSKMPQTPYSEEQV-NFGKWTSMGVDSLLTGTITQNAEGSYVISYQLVDIV 123

Query: 134 -------------KDRKQIIGK------KFFSSPAS-WRKIAHTISDDIYQSITGEKGDF 173
                        +D + ++ K      K  + PAS  R+ AH I+D +Y+ +TGE+G F
Sbjct: 124 RGQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGAF 183

Query: 174 NSRILFVSESVVSG--IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +RI +V   VV+        L + D DG N R +  S+ Q L  P +SP+ Q +AY ++
Sbjct: 184 LTRIAYV---VVNDKDPYPYQLRIADYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYVSF 239

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +     +Y+M+    +  +++ +F     APRFS +GK   + + K   + +Y++DL +
Sbjct: 240 QNGQA-EIYMMNIYSGKR-EKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLAT 297

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                +T+    N    + PD   ++F SDR GK Q+Y +  +G + KR++
Sbjct: 298 RRLTEVTSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLT 348



 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +S ++SPD   + + S + G+ ++Y+M   +G  +K  S  +      P +SP G  +A 
Sbjct: 223 MSPAWSPDGQTLAYVSFQNGQAEIYMMNIYSGKREKLTSFPRHNG--APRFSPDGKTLAL 280

Query: 364 TKFSGEKFAIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                    +  M  D +  RL       SN   P W P G+SLIF+  + G    ++Y 
Sbjct: 281 VLSKTGNLQVYTM--DLATRRLTEVTSGRSNNTEPFWHPDGKSLIFTSDRGGK--PQIYQ 336

Query: 421 IDLNG 425
           ++L+G
Sbjct: 337 VNLSG 341


>gi|113970703|ref|YP_734496.1| translocation protein TolB [Shewanella sp. MR-4]
 gi|114047932|ref|YP_738482.1| translocation protein TolB [Shewanella sp. MR-7]
 gi|122944592|sp|Q0HTY0|TOLB_SHESR RecName: Full=Protein tolB; Flags: Precursor
 gi|123029559|sp|Q0HHM8|TOLB_SHESM RecName: Full=Protein tolB; Flags: Precursor
 gi|113885387|gb|ABI39439.1| TolB, N-terminal domain protein [Shewanella sp. MR-4]
 gi|113889374|gb|ABI43425.1| TolB, N-terminal domain protein [Shewanella sp. MR-7]
          Length = 442

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 189/398 (47%), Gaps = 25/398 (6%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +++VV  DL RS  F  + +    Q+     +      W ++GA+ +V G V   G D+ 
Sbjct: 54  IADVVMSDLIRSGTFKPLDELGLPQRGIGALAQFDASAWANVGAEAVVVGSVKPYGTDQF 113

Query: 125 RVEFRLWD-VKDRKQII------------GKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
            V F L D VK + Q +             ++   S A +R+  H ISD +Y+ +TG +G
Sbjct: 114 LVSFDLIDLVKAQNQALKGPTSATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGIRG 173

Query: 172 DFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            F +RI +V   VV+   K   SL + D DG N + L  S +  L  P +SP+ +++AY 
Sbjct: 174 AFLTRISYV---VVNHSQKAAYSLMIADYDGYNEQMLLRSPEP-LMSPSWSPDGRRLAYV 229

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +++++    +++ D    +   ++ +F  +  AP FS +GK   +++ KD   +IY +D+
Sbjct: 230 SFENKKA-EIFVQDL-YTQVRTKVSSFPGINGAPTFSPDGKSLAVTLSKDGQPEIYVIDI 287

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            + A +R+TN   I+   S+ PD   ++F S+R G+ QLY +  N     R + + E + 
Sbjct: 288 ATKAAKRITNHYSIDTEPSWYPDGKSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNL 347

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              + +P G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+   
Sbjct: 348 GGSI-TPDGRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTT 406

Query: 410 KDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
             G     L ++  +GR    L         P W  F+
Sbjct: 407 YQGK--QVLAAVSTDGRFKARLPVGQGEVKSPSWSPFL 442


>gi|161615018|ref|YP_001588983.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168238898|ref|ZP_02663956.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168240606|ref|ZP_02665538.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168264358|ref|ZP_02686331.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168467689|ref|ZP_02701526.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168820117|ref|ZP_02832117.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194443806|ref|YP_002039989.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194450069|ref|YP_002044782.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194470048|ref|ZP_03076032.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194737053|ref|YP_002113855.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197250927|ref|YP_002145709.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197264907|ref|ZP_03164981.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198244972|ref|YP_002214718.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200390881|ref|ZP_03217492.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204929894|ref|ZP_03220915.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|238911681|ref|ZP_04655518.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|161364382|gb|ABX68150.1| hypothetical protein SPAB_02778 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402469|gb|ACF62691.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194408373|gb|ACF68592.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194456412|gb|EDX45251.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194712555|gb|ACF91776.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195629207|gb|EDX48575.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197214630|gb|ACH52027.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197243162|gb|EDY25782.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197288350|gb|EDY27731.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197939488|gb|ACH76821.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199603326|gb|EDZ01872.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204320888|gb|EDZ06089.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205339859|gb|EDZ26623.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205343003|gb|EDZ29767.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205347159|gb|EDZ33790.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|312911775|dbj|BAJ35749.1| tol-pal system protein TolB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321226327|gb|EFX51378.1| Tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322615818|gb|EFY12736.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322621377|gb|EFY18233.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322623634|gb|EFY20472.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322628904|gb|EFY25685.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322634886|gb|EFY31616.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636586|gb|EFY33290.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641771|gb|EFY38405.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647827|gb|EFY44307.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322651359|gb|EFY47741.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322652660|gb|EFY49009.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322658641|gb|EFY54902.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664930|gb|EFY61121.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668401|gb|EFY64557.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322675251|gb|EFY71327.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|323129060|gb|ADX16490.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323191722|gb|EFZ76975.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323200616|gb|EFZ85691.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202287|gb|EFZ87335.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323205444|gb|EFZ90410.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323212128|gb|EFZ96953.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323216147|gb|EGA00876.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221362|gb|EGA05781.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226785|gb|EGA10976.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230999|gb|EGA15115.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323234168|gb|EGA18257.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323238137|gb|EGA22195.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323243572|gb|EGA27590.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247403|gb|EGA31362.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323251392|gb|EGA35264.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323256485|gb|EGA40217.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323260624|gb|EGA44233.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323264695|gb|EGA48197.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270959|gb|EGA54394.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 431

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 183/415 (44%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN + +    Q
Sbjct: 20  LHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQ 79

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           +      + +   W++LG   +V G+V         V ++L D       ++ +  +   
Sbjct: 80  QPATAQEV-QPTAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVN 138

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++ 
Sbjct: 139 KQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVV 196

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS 
Sbjct: 197 HRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNGAPAFSP 254

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q
Sbjct: 255 DGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQ 314

Query: 328 LYVMQSNGSDQKRI----SQDKEA------------------------------------ 347
           +Y M  NG   +RI    SQ+++A                                    
Sbjct: 315 VYKMNINGGAAQRITWEGSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSS 374

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 375 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 429


>gi|16764118|ref|NP_459733.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56414135|ref|YP_151210.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197363057|ref|YP_002142694.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|205352012|ref|YP_002225813.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856192|ref|YP_002242843.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|32699711|sp|Q8ZQT5|TOLB_SALTY RecName: Full=Protein tolB; Flags: Precursor
 gi|67461910|sp|Q5PCN2|TOLB_SALPA RecName: Full=Protein tolB; Flags: Precursor
 gi|226705890|sp|B5QX24|TOLB_SALEP RecName: Full=Protein tolB; Flags: Precursor
 gi|226705891|sp|B5R699|TOLB_SALG2 RecName: Full=Protein tolB; Flags: Precursor
 gi|226705892|sp|B5BC62|TOLB_SALPK RecName: Full=Protein tolB; Flags: Precursor
 gi|16419258|gb|AAL19692.1| tol protein required for outer membrane integrity [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|56128392|gb|AAV77898.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197094534|emb|CAR60054.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|205271793|emb|CAR36627.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|206707995|emb|CAR32284.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|261246011|emb|CBG23813.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267992489|gb|ACY87374.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157339|emb|CBW16828.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|320085019|emb|CBY94808.1| Protein tolB Flags: Precursor [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|332987685|gb|AEF06668.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 430

 Score =  127 bits (319), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 183/415 (44%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN + +    Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           +      + +   W++LG   +V G+V         V ++L D       ++ +  +   
Sbjct: 79  QPATAQEV-QPTAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVN 137

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++ 
Sbjct: 138 KQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS 
Sbjct: 196 HRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q
Sbjct: 254 DGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQ 313

Query: 328 LYVMQSNGSDQKRI----SQDKEA------------------------------------ 347
           +Y M  NG   +RI    SQ+++A                                    
Sbjct: 314 VYKMNINGGAAQRITWEGSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSS 373

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 374 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 428


>gi|163802041|ref|ZP_02195937.1| translocation protein TolB precursor [Vibrio sp. AND4]
 gi|159174182|gb|EDP58990.1| translocation protein TolB precursor [Vibrio sp. AND4]
          Length = 449

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 209/462 (45%), Gaps = 50/462 (10%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
           L  + VL+G     +  A   V T+  + + P+++   K+   + L   +S V++ DLQR
Sbjct: 6   LLGMFVLLGSLTSVAHAALELVITDGIDSARPIAVVPFKWEGSEPLPTDISAVIASDLQR 65

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  F+ +  +   Q   N   +  F  W  LG   L+TG + K  +    V ++L DV  
Sbjct: 66  SGKFSPVPTNKMPQTPFNESEV-NFDAWTGLGVDALLTGSIKKNEQGNFVVNYQLVDVV- 123

Query: 136 RKQIIGKK----------------FFSSPAS-----WRKIAHTISDDIYQSITGEKGDFN 174
           R Q+ G K                 F+  A+      R+ AH ISD +Y+ +TG++G F 
Sbjct: 124 RGQLTGGKSKALGDGELVLSKDHILFNKVATVQGPRMREYAHRISDLVYEQLTGDRGAFM 183

Query: 175 SRILFVSESVVSGIIKNS----LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           +RI +V   VV+   K+S    L + D DG N R +  S+ Q L  P +SP+ +K+AY +
Sbjct: 184 TRIAYV---VVND--KDSFPYQLRISDYDGYNERLVLRSK-QPLMSPAWSPDGKKLAYVS 237

Query: 231 YDDED----ILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           + +      I+ +Y  +  +I   P+  G       AP+FS +G +  + + K  ++ +Y
Sbjct: 238 FQNGQAEIFIMNIYTGEREKITSYPRHNG-------APKFSPDGSQLALVLSKTGSLQVY 290

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           ++DL++    ++T     N    + PD   ++F SDR GK Q+Y +        R++   
Sbjct: 291 TLDLKTRKLSQITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYKVDLASGSTNRLTWQG 350

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +    + +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I
Sbjct: 351 SQNLGGQI-TPDGRFLVMVNRSDSGFNLAKQDLETGALQVLTQTLLDESPSIAPNGGMVI 409

Query: 406 FSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           +S   +      + SID  GR    L  T      P W  F+
Sbjct: 410 YSSIYNKKNVLSMVSID--GRFKARLPATNGRVRAPAWSPFL 449


>gi|288936479|ref|YP_003440538.1| Tol-Pal system beta propeller repeat protein TolB [Klebsiella
           variicola At-22]
 gi|288891188|gb|ADC59506.1| Tol-Pal system beta propeller repeat protein TolB [Klebsiella
           variicola At-22]
          Length = 430

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 181/415 (43%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   ++         V  +V+ DL+ S  FN + +    Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFQWAGQGAAPEDVGGIVAADLRNSGKFNPLDRSRLPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK--QIIGKKFFSS 147
           + T+   + +   W++LG   +V G+V        +V ++L D        +    F  +
Sbjct: 79  QPTSAQEV-QPAAWSALGIDAVVVGQVTSNPDGSYQVAYQLVDTGGAPGTTLAQGSFKVT 137

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
               R  AH  SD +++ +TG KG F +RI +V +    G     L V D DG N ++L 
Sbjct: 138 KQYLRYAAHAASDAVFEKLTGIKGAFRTRIAYVVQKN-GGQFPYELRVSDYDGYN-QFLV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + A ++I +F     AP FS 
Sbjct: 196 HRSSQPLMSPAWSPDGSKLAYVTF--ESGRSALVVQTLANGAVRQIASFPQHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++TN    N   S+ PDS  + F SD+ G+ Q
Sbjct: 254 DGAKLAFALSKTGSLNLYVMDLGSGQIRQVTNGRSNNTEPSWFPDSQNLAFTSDQAGRPQ 313

Query: 328 LYVMQSNGSDQKRIS--------------------------------QDKEA-------- 347
           +Y +  NG   +RI+                                QD EA        
Sbjct: 314 VYKVNINGGTPQRITWEGSQNQDADVSADGKTMVMVSSAGGQQHIAKQDLEAGGVQVLSS 373

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 374 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 428


>gi|24374289|ref|NP_718332.1| tolB protein [Shewanella oneidensis MR-1]
 gi|32699702|sp|Q8EDJ8|TOLB_SHEON RecName: Full=Protein tolB; Flags: Precursor
 gi|24348827|gb|AAN55776.1|AE015714_3 tolB protein [Shewanella oneidensis MR-1]
          Length = 442

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 191/400 (47%), Gaps = 29/400 (7%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +++VV  DL RS  F  + +    Q+     +      W ++ A+ LV G V   G D+ 
Sbjct: 54  IADVVMSDLVRSGTFKPLDELGLPQRGIGALAQFDANAWTNVSAEALVVGSVKPYGADQF 113

Query: 125 RVEFRLWD-VKDRKQII------------GKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
            V F L D VK + Q +             ++   S   +R+  H ISD +Y+ +TG +G
Sbjct: 114 LVSFELIDLVKAQNQALKGSANPTELLMDSRQTVISATQFRQYGHRISDIVYEKLTGIRG 173

Query: 172 DFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            F +RI +V   VV+   K   SL + D DG N + L  S +  L  P +SP+ +++AY 
Sbjct: 174 AFLTRISYV---VVNHSQKAAYSLMIADYDGYNEQMLLRSPEP-LMSPAWSPDGRRLAYV 229

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +++++    +++ D    +   ++ +F  +  AP FS +GK   +++ KD   +IY +D+
Sbjct: 230 SFENKKA-EIFVQDL-YTQVRTKVSSFSGINGAPSFSPDGKSLAVTLSKDGQPEIYVIDI 287

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            + A +R+TN   I+   S+ PD   ++F S+R G+ QLY +  N     R + + E + 
Sbjct: 288 ATKAIKRITNHYSIDTEPSWYPDGKSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNL 347

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              + +P G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+   
Sbjct: 348 GGSI-TPDGRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTT 406

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFM 446
             G     L ++  +GR +  +  PA   +   P W  F+
Sbjct: 407 HQGK--QVLAAVSTDGRFKARL--PAGQGEVKSPSWSPFL 442


>gi|238793897|ref|ZP_04637517.1| hypothetical protein yinte0001_25120 [Yersinia intermedia ATCC
           29909]
 gi|238726800|gb|EEQ18334.1| hypothetical protein yinte0001_25120 [Yersinia intermedia ATCC
           29909]
          Length = 413

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 187/403 (46%), Gaps = 20/403 (4%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K++       ++  +V  DL+ S  FN I      Q
Sbjct: 2   LHAEVRIEITQGVDSARPIGVVSFKWMGPGTPPEEIGAIVGADLRNSGKFNPIDAARMPQ 61

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           + +    +     W +LG   +V G+V         V ++L D       ++ +  +   
Sbjct: 62  QPSTAAEV-TPAAWTALGIDAVVVGQVQPSADGSYVVSYQLVDTSGAAGSVLAQNQYKVT 120

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R  AHT SD++++ +TG KG F +RI +V ++   G   + L V D DG N +++ 
Sbjct: 121 KQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGKFPHELRVSDYDGYN-QFVV 178

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               + L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS 
Sbjct: 179 HRSPEPLMSPAWSPDGSKIAYVTF--ESGKSALVIQTLANGAIRQVASFPRHNGAPSFSP 236

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   S+ PDS  + + SD+ G+ Q
Sbjct: 237 DGTKLAFALSKSGSLNLYVMDLGSGQISQVTDGRSNNTEPSWFPDSQNLAYTSDQGGRPQ 296

Query: 328 LYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +Y +  NG   +RI    SQ++ A       SP G  +A    +G    I     +    
Sbjct: 297 VYKVNINGGAPQRITWEGSQNQNADV-----SPDGKFLALVSSNGGAQHIAKQDLETGAV 351

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           ++L +    + P+ +P+G  +I+S  +    G+ L  +  +GR
Sbjct: 352 QVLTDTFLDETPSIAPNGTMVIYSSTQ--GLGAVLQLVSTDGR 392


>gi|224370139|ref|YP_002604303.1| AglW [Desulfobacterium autotrophicum HRM2]
 gi|223692856|gb|ACN16139.1| AglW [Desulfobacterium autotrophicum HRM2]
          Length = 447

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 191/397 (48%), Gaps = 33/397 (8%)

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS--IPR----FQDWNSLGAQVLV 112
           D L G+  E++  DL+ +    ++   S+   I NP +  I R    F++W  +G++++V
Sbjct: 64  DRLAGEAREILVSDLEFTGYMTILDPLSY---IENPATKGITRTDLNFKNWTVIGSELVV 120

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           T  +++ G D L ++ RL+D    + ++GK +       R++ H    +I   +TG+ G 
Sbjct: 121 TCGIVESGGD-LELKMRLFDPFTERLVVGKVYTGKVNDLRRMIHRFCSEISFHLTGKWGV 179

Query: 173 FNSRILFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           F+SR+ FVS        KN  + V + DG N R +T   + I   P +S + Q +AY +Y
Sbjct: 180 FSSRLAFVSTKG-----KNKEIFVAEFDGHNSRQVT-RLNSISISPAWSSDGQWLAYTSY 233

Query: 232 --DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEAMDIYSV 287
              + DI    L+  R       + NF+ M + P +        A +S + D+  +IY +
Sbjct: 234 AGGNPDIYIKNLIQNR-----GAVVNFKGMNITPAWIPGQFSLAAALSFENDQ--EIYLL 286

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             +    ++LTN+  I++S  +SPD  ++ F S R G  Q+Y+        +R++     
Sbjct: 287 TGKGRIIKKLTNSWGIDVSPCFSPDGKKMAFVSKRAGTPQVYIQDMESDTVRRLTFTGRY 346

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIF 406
           +   P WSP GD IA+   +  +  I V+  DGS   +L     + + P WSP    + F
Sbjct: 347 NT-SPAWSPDGDKIAYVGIANGEINIYVVGIDGSGVVQLTSSTGDNEDPCWSPDAGLIAF 405

Query: 407 SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQW 442
           +  ++G   +++Y +   G  +  L       ++P+W
Sbjct: 406 TSTREGV--ARIYVMTATGGEQRRLFLMDGAQTNPEW 440


>gi|317047357|ref|YP_004115005.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Pantoea sp. At-9b]
 gi|316948974|gb|ADU68449.1| Tol-Pal system beta propeller repeat protein TolB [Pantoea sp.
           At-9b]
          Length = 431

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 95/432 (21%), Positives = 190/432 (43%), Gaps = 52/432 (12%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +++ L   ++L        +   +    N+A   P+ +   ++         +  +V+ D
Sbjct: 5   LRVTLGFFVLLWAAMLHAEVRIEITQGVNTAR--PIGVVPFQWAGPGAAPEDIGGIVAAD 62

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN + +    Q+ T+   + +   W++LG   +V G+V        ++ ++L D
Sbjct: 63  LRNSGKFNPLDRSRLPQQPTSAQQV-QPAAWSALGIDAVVVGQVTPNADGSYQIAYQLVD 121

Query: 133 VKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
                  ++ +  +     W R  AHT SD++++ +TG KG F +RI +V ++   G   
Sbjct: 122 TGGAPGTVLAQNSYKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFP 180

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L V D DG N +++     + L  P +SP+  K+AY T+  E      ++ T  + A 
Sbjct: 181 YELRVSDYDGYN-QFVVHRSPEPLMSPTWSPDGSKLAYVTF--ESGKSALVIQTLANGAI 237

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+  + +   ++ 
Sbjct: 238 RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLGSGQIRQITDGRYNSTEPTWF 297

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------------------------- 342
           PDS  + + SD+ G  Q+Y +  NG   +RI+                            
Sbjct: 298 PDSQTLAYTSDQAGAPQIYKIGINGGAPQRITWEGAQNQDADVAADGKSMVMISSAGGAQ 357

Query: 343 ----QDKEA--------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLV 387
               QD E         ++ D  P  +P G ++ ++   G    + ++  DG  + RL  
Sbjct: 358 HVAKQDLETGAVQTLTDTFLDETPSLAPNGTMVIYSSTQGMGSVLQLVSTDGRFKARLPA 417

Query: 388 EDSNLQAPTWSP 399
            D  +++P WSP
Sbjct: 418 TDGQVKSPAWSP 429


>gi|161525756|ref|YP_001580768.1| translocation protein TolB [Burkholderia multivorans ATCC 17616]
 gi|189349522|ref|YP_001945150.1| translocation protein TolB [Burkholderia multivorans ATCC 17616]
 gi|226705870|sp|A9AFQ0|TOLB_BURM1 RecName: Full=Protein tolB; Flags: Precursor
 gi|160343185|gb|ABX16271.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           multivorans ATCC 17616]
 gi|189333544|dbj|BAG42614.1| TolB protein [Burkholderia multivorans ATCC 17616]
          Length = 431

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 107/442 (24%), Positives = 191/442 (43%), Gaps = 16/442 (3%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G    ++ +A V V       +   IA   F +   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAG----SAANAQVNVLITGVGSTQFPIATANFANEAGLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I  D+    +    S+     W + GA   V G V  EG  + ++
Sbjct: 59  SIVRADLARSGKFTNI--DAGSTPVPETASV-DLGAWKAKGANAFVAGSVNHEGNGQYKI 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++   
Sbjct: 116 NFILYDTVKQQSLGGLSLSANDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G    +++       IYSV+       RLT +  I+  
Sbjct: 230 GRR-YMVSDQKGNNSAPAWSPDGNTLAVALSLTGNTQIYSVNSNGGGLRRLTQSSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFT 364
             YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+ 
Sbjct: 289 PFYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYI 348

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +G  F + V          +   +  ++P+++ +G+ ++++ +  G         D +
Sbjct: 349 SRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYILYATQSGGRNVLAAVPSDGS 408

Query: 425 GRNETLINTPAYASDPQWVGFM 446
              + L        +P W  FM
Sbjct: 409 APPQILSVQGGSVREPSWGPFM 430


>gi|170701073|ref|ZP_02892050.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           ambifaria IOP40-10]
 gi|172059754|ref|YP_001807406.1| translocation protein TolB [Burkholderia ambifaria MC40-6]
 gi|226705867|sp|B1YTW7|TOLB_BURA4 RecName: Full=Protein tolB; Flags: Precursor
 gi|170134013|gb|EDT02364.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           ambifaria IOP40-10]
 gi|171992271|gb|ACB63190.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           ambifaria MC40-6]
          Length = 431

 Score =  126 bits (317), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 189/439 (43%), Gaps = 16/439 (3%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           +L  +  +   L+  GG    + +A V V       +   IA   F +   L  +V+ +V
Sbjct: 6   KLGFRALVASCLIAAGG----AANAQVNVLITGVGSTQFPIATANFANEAGLPQQVTSIV 61

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
             DL RS  F  I  D+    +    S+     W + GA   V G V +E   + +V F 
Sbjct: 62  RADLARSGKFTNI--DAGSTPVPETASV-DLGAWKAKGANAFVAGSVNREANGQYKVNFI 118

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++      
Sbjct: 119 LYDTVKQQSLGGLSLTATDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN---- 174

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D    R 
Sbjct: 175 RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPTGRR 232

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              + + +    AP +S +     +++       IY+V+       RLT +  I+    Y
Sbjct: 233 -YMVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNANGGGLRRLTQSSSIDTEPYY 291

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS 367
           SPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+   +
Sbjct: 292 SPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRISPDGKLLAYISRT 351

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G  F + V          +   +  ++P+++ +G+ L+++ +  G         D +   
Sbjct: 352 GGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYLLYATQSGGRNVLAAVPSDGSAPP 411

Query: 428 ETLINTPAYASDPQWVGFM 446
           + L        +P W  FM
Sbjct: 412 QILSVQGGSVREPSWGPFM 430


>gi|323972027|gb|EGB67247.1| tol-Pal system beta propeller TolB [Escherichia coli TA007]
          Length = 431

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 188/421 (44%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 20  LHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRA 75

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 76  RLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 132

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 133 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 191

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 192 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 248

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD
Sbjct: 249 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 308

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 309 QAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 368

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WS
Sbjct: 369 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWS 428

Query: 399 P 399
           P
Sbjct: 429 P 429


>gi|317491197|ref|ZP_07949633.1| tol-Pal system beta propeller repeat protein TolB
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920744|gb|EFV42067.1| tol-Pal system beta propeller repeat protein TolB
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 430

 Score =  126 bits (316), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 194/417 (46%), Gaps = 17/417 (4%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           ++ + LL++     + + +HA V++          P+ +   K++        +  +V+ 
Sbjct: 6   RVAMGLLIL-----WASVLHAEVRIVITQGVDTARPIGVVPFKWMGPGSAPEDIGGIVAA 60

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  FN I  +   Q+ T    +     W +LG   +V G+V         V +++ 
Sbjct: 61  DLRNSGKFNPIDTNRMPQQPTTVAEVTP-AAWTALGIDAVVVGQVQPSADGGYVVSYQMV 119

Query: 132 DVK-DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           D   +   ++ +  +     W R  AHT SD++++ +TG KG F +RI +V ++   G  
Sbjct: 120 DTSGNPGSVLSQNQYKVTKQWLRYAAHTSSDEVFEKLTGIKGAFRTRIAYVVQTN-GGQF 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L V D DG N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A
Sbjct: 179 PYELRVADYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGKSALVIQTLSNGA 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +++ +F     AP FS +G +   ++ K  ++++Y +DL S A  ++T+    N   S+
Sbjct: 236 IRQVASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMDLGSGAIRQVTDGRSNNTEPSW 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PDS  + F SD+ G+ Q+Y +  NG   +R++ +   +    V S  G  +     SG 
Sbjct: 296 FPDSQNLAFTSDQGGRPQIYKVNINGGAPERLTWEGSQNQDGDV-SSDGKFLVMVGTSGG 354

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              I  +    +  ++L      + P+ +P+G  +I+S  +    GS L  +  +GR
Sbjct: 355 SQHITKLDLGSNANQVLTSTFLDETPSIAPNGTMVIYSSTQ--GLGSVLQLVSTDGR 409


>gi|218553267|ref|YP_002386180.1| translocation protein TolB [Escherichia coli IAI1]
 gi|226705879|sp|B7M6B0|TOLB_ECO8A RecName: Full=Protein tolB; Flags: Precursor
 gi|218360035|emb|CAQ97582.1| periplasmic protein [Escherichia coli IAI1]
          Length = 430

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 186/417 (44%), Gaps = 56/417 (13%)

Query: 32  IHAFVKVATNSANYS--PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++  +S   S  P+ +   ++V        +  +V+ DL+ S  FN + +    Q
Sbjct: 19  LHAEVRIVIDSGVDSGRPIGVVPFQWVGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQ 78

Query: 90  KITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFS 146
           +   P S    Q   W++LG   +V G+V         V ++L D       ++ +  + 
Sbjct: 79  Q---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYK 135

Query: 147 SPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
               W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N ++
Sbjct: 136 VNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QF 193

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP F
Sbjct: 194 VVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNGAPAF 251

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+
Sbjct: 252 SPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGR 311

Query: 326 EQLYVMQSNGSDQKRI----SQDKEA---------------------------------- 347
            Q+Y +  NG   +RI    SQ+++A                                  
Sbjct: 312 PQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVL 371

Query: 348 --SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
             ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WSP
Sbjct: 372 SSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSP 428


>gi|322670511|gb|EFY66644.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322679677|gb|EFY75718.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322684847|gb|EFY80846.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
          Length = 431

 Score =  126 bits (316), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 176/398 (44%), Gaps = 50/398 (12%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P+ +   K+         +  +V+ DL+ S  FN + +    Q+      + +   W++L
Sbjct: 37  PIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQQPATAQEV-QPTAWSAL 95

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQ 164
           G   +V G+V         V ++L D       ++ +  +     W R   HT SD++++
Sbjct: 96  GIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFE 155

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +TG KG F +RI +V ++   G     L V D DG N +++     Q L  P +SP+  
Sbjct: 156 KLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGS 213

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           K+AY T+  E      ++ T  + A +++ +F     AP FS +G +   ++ K  ++++
Sbjct: 214 KLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNL 271

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--- 341
           Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y M  NG   +RI   
Sbjct: 272 YVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQVYKMNINGGAAQRITWE 331

Query: 342 -SQDKEA------------------------------------SYFD--PVWSPQGDLIA 362
            SQ+++A                                    ++ D  P  +P G ++ 
Sbjct: 332 GSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVI 391

Query: 363 FTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 392 YSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 429


>gi|323170861|gb|EFZ56511.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           LT-68]
          Length = 430

 Score =  126 bits (316), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 190/426 (44%), Gaps = 64/426 (15%)

Query: 27  FFPTSIHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFN 80
            + +++HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN
Sbjct: 14  LWASALHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFN 69

Query: 81  LISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK- 137
            + +    Q+   P S    Q   W++LG   +V G+V         V ++L D      
Sbjct: 70  PLDRARLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPG 126

Query: 138 QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
            ++ +  +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V 
Sbjct: 127 TVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVS 185

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D DG N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F
Sbjct: 186 DYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASF 242

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  +
Sbjct: 243 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNL 302

Query: 317 VFESDREGKEQLYVMQSNGSDQKRI----SQDKEA------------------------- 347
            F SD+ G+ Q+Y +  NG   +RI    SQ+++A                         
Sbjct: 303 AFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQD 362

Query: 348 -----------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQ 393
                      ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++
Sbjct: 363 LATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVK 422

Query: 394 APTWSP 399
            P WSP
Sbjct: 423 FPAWSP 428


>gi|254253146|ref|ZP_04946464.1| TolB [Burkholderia dolosa AUO158]
 gi|124895755|gb|EAY69635.1| TolB [Burkholderia dolosa AUO158]
          Length = 432

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 187/431 (43%), Gaps = 17/431 (3%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           CL+    G     + +A V V       +   IA   F +   L  +++ +V  DL RS 
Sbjct: 16  CLIAASGG-----AANAQVNVLITGVGSTQFPIATANFANEAGLPQQITSIVRADLARSG 70

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F  I  D+    +    S+     W + GA   V G V +E   + +V F L+D   ++
Sbjct: 71  KFTNI--DAGSTPVPETASV-DLGAWKAKGANAFVAGSVNREANGQYKVNFILYDTVKQQ 127

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
            + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++      +  L + D
Sbjct: 128 SLGGLSLTANDNTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN----RYQLQISD 183

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D    R    + + +
Sbjct: 184 SDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPTGRR-YMVSDQK 240

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               AP +S +G    +++       IYSV+       RLT +  I+    YSPD   I 
Sbjct: 241 GNNSAPAWSPDGNTLAVALSLTGNTQIYSVNANGGGLRRLTQSNSIDTEPFYSPDGRWIY 300

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGV 375
           F SDR G  Q+Y M + G       +      ++  P  SP G L+A+   +G  F + V
Sbjct: 301 FTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYISRTGGGFKLYV 360

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                     +   ++ ++P+++ +G+ ++++ +  G         D +   + L     
Sbjct: 361 QDLQTGAANAITNTNHDESPSFAANGQYILYATQSGGRNVLAAVPSDGSAPPQILSVQGG 420

Query: 436 YASDPQWVGFM 446
              +P W  FM
Sbjct: 421 SVREPSWGPFM 431


>gi|325522835|gb|EGD01305.1| translocation protein TolB [Burkholderia sp. TJI49]
          Length = 431

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 107/439 (24%), Positives = 191/439 (43%), Gaps = 16/439 (3%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           +L  +  +   L+  G    ++ +A V V       +   IA   F +   L  +V+ +V
Sbjct: 6   KLGFRALVASCLIAAG----SAANAQVNVLITGVGSTQFPIATANFANEAGLPQQVTSIV 61

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
             DL RS  F  I  D+    +    S+     W + GA   V G V +EG  + +V F 
Sbjct: 62  RADLARSGKFTNI--DAGSTPVPETASV-DLGAWKAKGANAFVAGSVNREGNGQYKVNFI 118

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D   ++ + G    ++ ++ R   H I+D IYQ + G +G F +R+ +V +S      
Sbjct: 119 LYDTVKQQSLGGLSLTANDSTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKSGN---- 174

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D      
Sbjct: 175 RYQLQISDSDGQNARIALSSTEPII-SPSWSPSGTKVAYVSFERKKPI-VYIHDLPTGHR 232

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              + + +    AP +S +G    +++       IY+V+       RLT +  I+    Y
Sbjct: 233 -YIVSDQKGNNSAPAWSPDGNTLAVALSLTGNTQIYTVNSTGGGLRRLTQSSSIDTEPYY 291

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS 367
           SPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+   +
Sbjct: 292 SPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYISRT 351

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G  F + V          +   +  ++P+++ +G+ ++++ +  G         D +   
Sbjct: 352 GGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYILYATQSGGRNVLAAVPSDGSAPP 411

Query: 428 ETLINTPAYASDPQWVGFM 446
           + L        +P W  FM
Sbjct: 412 QILSVQGGSVREPSWGPFM 430


>gi|156934765|ref|YP_001438681.1| translocation protein TolB [Cronobacter sakazakii ATCC BAA-894]
 gi|156533019|gb|ABU77845.1| hypothetical protein ESA_02605 [Cronobacter sakazakii ATCC BAA-894]
          Length = 431

 Score =  125 bits (315), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/415 (22%), Positives = 184/415 (44%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN + +    Q
Sbjct: 20  LHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQ 79

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           +      + +   W++LG   +V G+V   G     V ++L D       ++ +  +   
Sbjct: 80  QPATAQEV-QPAAWSALGIDAVVVGQVTPNGDGSYTVAYQLVDTGGAPGTVLAQNSYKVN 138

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++ 
Sbjct: 139 KQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVV 196

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS 
Sbjct: 197 HRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNGAPAFSP 254

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +D+ S    ++T+    N   ++ PDS  + + SD+ G+ Q
Sbjct: 255 DGSKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTEPTWYPDSQTLAYTSDQAGRPQ 314

Query: 328 LYVMQSNGSDQKRI----SQDKEA------------------------------------ 347
           +Y +  NG   +R+    SQ+++A                                    
Sbjct: 315 VYKVNINGGAPQRVTWEGSQNQDADISSDGKFMVMVSSNGGAQNIAKLDLATGGVQTLSS 374

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 375 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 429


>gi|260597139|ref|YP_003209710.1| translocation protein TolB [Cronobacter turicensis z3032]
 gi|260216316|emb|CBA29301.1| Protein tolB [Cronobacter turicensis z3032]
          Length = 430

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 184/417 (44%), Gaps = 56/417 (13%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN + +    Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQ 78

Query: 90  KITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFS 146
           +   P S    Q   W++LG   +V G+V   G     V ++L D       ++ +  + 
Sbjct: 79  Q---PSSAQEVQPAAWSALGIDAVVVGQVTPNGDGSYTVAYQLVDTGGAPGTVLAQNSYK 135

Query: 147 SPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
               W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N ++
Sbjct: 136 VNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QF 193

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +     Q L  P +SP+  KVAY T+  E      ++ T  + A +++ +F     AP F
Sbjct: 194 VVHRSPQPLMSPAWSPDGSKVAYVTF--ESGRSALVIQTLSNGAVRQVASFPRHNGAPAF 251

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G +   ++ K  ++++Y +D+ S    ++T+    N   ++ PDS  + + SD+ G+
Sbjct: 252 SPDGSKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTEPTWYPDSQTLAYTSDQAGR 311

Query: 326 EQLYVMQSNGSDQKRI----SQDKEA---------------------------------- 347
            Q+Y +  NG   +R+    SQ+++A                                  
Sbjct: 312 PQVYKVNINGGAPQRVTWEGSQNQDADVSSDGKFMVMVSSNGGAQNIAKLDLVTGGVQTL 371

Query: 348 --SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
             ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WSP
Sbjct: 372 SSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSP 428


>gi|238893776|ref|YP_002918510.1| translocation protein TolB [Klebsiella pneumoniae NTUH-K2044]
 gi|262041200|ref|ZP_06014412.1| tol-Pal system beta propeller repeat protein TolB [Klebsiella
           pneumoniae subsp. rhinoscleromatis ATCC 13884]
 gi|329998744|ref|ZP_08303198.1| Tol-Pal system beta propeller repeat protein TolB [Klebsiella sp.
           MS 92-3]
 gi|238546092|dbj|BAH62443.1| translocation protein TolB precursor [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259041429|gb|EEW42488.1| tol-Pal system beta propeller repeat protein TolB [Klebsiella
           pneumoniae subsp. rhinoscleromatis ATCC 13884]
 gi|328538571|gb|EGF64675.1| Tol-Pal system beta propeller repeat protein TolB [Klebsiella sp.
           MS 92-3]
          Length = 431

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 183/415 (44%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   ++         V  +V+ DL+ S  FN + +    Q
Sbjct: 20  LHAEVRIEITQGVDSARPIGVVPFQWAGQGAAPEDVGGIVAADLRNSGKFNPLDRSRLPQ 79

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR--KQIIGKKFFSS 147
           + T+   + +   W++LG   +V G+V +      +V ++L D        +    F  +
Sbjct: 80  QPTSAQEV-QPAAWSALGIDAVVVGQVTQNPDGSYQVAYQLVDTGGAPGTTLAQGSFKVT 138

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
               R  AH  SD +++ +TG KG F +RI +V +    G     L V D DG N ++L 
Sbjct: 139 KQYLRYAAHAASDAVFEKLTGIKGAFRTRIAYVVQKN-GGQYPYELRVSDYDGYN-QFLV 196

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + + ++I +F     AP FS 
Sbjct: 197 HRSSQPLMSPAWSPDGSKLAYVTF--ESGRSALVVQTLANASVRQIASFPQHNGAPAFSP 254

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++TN    N   S+ PDS  + F SD+ G+ Q
Sbjct: 255 DGSKLAFALSKTGSLNLYVMDLGSGQIRQVTNGRSNNTEPSWFPDSQNLAFTSDQAGRPQ 314

Query: 328 LYVMQSNGSDQKRI----SQDKEA------------------------------------ 347
           +Y +  NG   +RI    SQ+++A                                    
Sbjct: 315 VYKVNINGGTPQRITWEGSQNQDADVSADGKTMVMVSSAGGQQHIAKQDLETGGVQVLSS 374

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 375 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 429


>gi|331672262|ref|ZP_08373053.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA280]
 gi|331070457|gb|EGI41821.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA280]
          Length = 430

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 187/421 (44%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 19  LHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRA 74

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 75  RLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 131

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 132 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 190

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 191 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 247

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD
Sbjct: 248 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 307

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 308 QAGRPQVYKVNVNGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 367

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 368 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 427

Query: 399 P 399
           P
Sbjct: 428 P 428


>gi|209776394|gb|ACI86509.1| periplasmic protein TolB [Escherichia coli]
          Length = 430

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 187/421 (44%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 19  LHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRA 74

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 75  HLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 131

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 132 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 190

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 191 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 247

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD
Sbjct: 248 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 307

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 308 QAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 367

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 368 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 427

Query: 399 P 399
           P
Sbjct: 428 P 428


>gi|16759687|ref|NP_455304.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142540|ref|NP_805882.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|32699709|sp|Q8Z8C0|TOLB_SALTI RecName: Full=Protein tolB; Flags: Precursor
 gi|25513116|pir||AH0592 tolB protein precursor [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16501980|emb|CAD05210.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29138171|gb|AAO69742.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 430

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/415 (23%), Positives = 182/415 (43%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN + +    Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           +      + +   W++LG   ++ G V         V ++L D       ++ +  +   
Sbjct: 79  QPATAQEV-QPTAWSALGIDAVIVGLVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVN 137

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++ 
Sbjct: 138 KQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS 
Sbjct: 196 HRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q
Sbjct: 254 DGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQ 313

Query: 328 LYVMQSNGSDQKRI----SQDKEA------------------------------------ 347
           +Y M  NG   +RI    SQ+++A                                    
Sbjct: 314 VYKMNINGGAAQRITWEGSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSS 373

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 374 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 428


>gi|291281683|ref|YP_003498501.1| Protein tolB precursor [Escherichia coli O55:H7 str. CB9615]
 gi|290761556|gb|ADD55517.1| Protein tolB precursor [Escherichia coli O55:H7 str. CB9615]
          Length = 431

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 187/421 (44%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 20  LHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRA 75

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 76  HLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 132

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 133 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 191

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 192 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 248

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD
Sbjct: 249 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 308

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 309 QAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 368

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 369 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 428

Query: 399 P 399
           P
Sbjct: 429 P 429


>gi|213051767|ref|ZP_03344645.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213427709|ref|ZP_03360459.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213857527|ref|ZP_03384498.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289827213|ref|ZP_06545933.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
          Length = 431

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 97/415 (23%), Positives = 182/415 (43%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN + +    Q
Sbjct: 20  LHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQ 79

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           +      + +   W++LG   ++ G V         V ++L D       ++ +  +   
Sbjct: 80  QPATAQEV-QPTAWSALGIDAVIVGLVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVN 138

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++ 
Sbjct: 139 KQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVV 196

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS 
Sbjct: 197 HRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNGAPAFSP 254

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q
Sbjct: 255 DGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQ 314

Query: 328 LYVMQSNGSDQKRI----SQDKEA------------------------------------ 347
           +Y M  NG   +RI    SQ+++A                                    
Sbjct: 315 VYKMNINGGAAQRITWEGSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSS 374

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 375 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 429


>gi|320172957|gb|EFW48185.1| translocation protein TolB [Shigella dysenteriae CDC 74-1112]
          Length = 430

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 187/421 (44%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 19  LHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRA 74

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 75  RLPQQ---PGSAQEVQPSAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 131

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 132 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 190

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 191 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 247

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD
Sbjct: 248 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQVRQVTDGRSNNTEPTWFPDSQNLAFTSD 307

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 308 QAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 367

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 368 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 427

Query: 399 P 399
           P
Sbjct: 428 P 428


>gi|289674677|ref|ZP_06495567.1| translocation protein TolB [Pseudomonas syringae pv. syringae FF5]
          Length = 312

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 163/315 (51%), Gaps = 9/315 (2%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVK---VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           INL   L+++  F    + A  K   V + S   +P+++    +   + L   ++E++S 
Sbjct: 2   INLFRGLLVVLCFASAMVSAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIISN 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L+
Sbjct: 62  DLRNSGYYAPIPKQNMISLPTQASEV-IFRDWKALGAQYVMVGNITPAG-GRLQIQYALF 119

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIK 190
           +V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+ E       +
Sbjct: 120 NVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNTR 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L   D DGA    L  SR+ IL  PRF+P+ +++AY +++ +   R+++      R  
Sbjct: 180 YTLQRSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGRR- 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    + 
Sbjct: 237 EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFFG 296

Query: 311 PDSSQIVFESDREGK 325
            D S + F SDR GK
Sbjct: 297 KDGSTLYFTSDRGGK 311



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 7/102 (6%)

Query: 329 YVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQER 384
           Y +Q +  D  R   + Q +E     P ++P G  IA+  F  ++  I V   D G +E+
Sbjct: 180 YTLQRSDYDGARAVTLLQSREP-ILSPRFAPDGKRIAYVSFEQKRPRIFVQHIDTGRREQ 238

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +   +    AP WSP G  L F   KDG+   ++Y I+L  R
Sbjct: 239 ITNFEGLNGAPAWSPDGSKLAFVLSKDGN--PEIYVINLASR 278


>gi|62179322|ref|YP_215739.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|75484379|sp|Q57RK3|TOLB_SALCH RecName: Full=Protein tolB; Flags: Precursor
 gi|62126955|gb|AAX64658.1| tol protein required for outer membrane integrity, uptake of group
           A colicins, and translocation of phage DNA to cytoplasm,
           may be part of multiprotein peptidoglycan recycling
           complex (Two domains) [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|322713793|gb|EFZ05364.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 430

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 183/415 (44%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN + +    Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           +      + +   W++LG   +V G+V         + ++L D       ++ +  +   
Sbjct: 79  QPATAQEV-QPTAWSALGIDAVVVGQVTPNPDGSYNIAYQLVDTGGAPGTVLAQNSYKVN 137

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++ 
Sbjct: 138 KQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + + +++ +F     AP FS 
Sbjct: 196 HRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGSVRQVASFPRHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q
Sbjct: 254 DGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQ 313

Query: 328 LYVMQSNGSDQKRI----SQDKEA------------------------------------ 347
           +Y M  NG   +RI    SQ+++A                                    
Sbjct: 314 VYKMNINGGAAQRITWEGSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSS 373

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 374 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 428


>gi|328473193|gb|EGF44041.1| translocation protein TolB [Vibrio parahaemolyticus 10329]
          Length = 450

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 191/430 (44%), Gaps = 46/430 (10%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P+++   K+     L   VS V++ DLQRS  F+ +      Q   N   +  F  W SL
Sbjct: 37  PIAVVPFKWEGTQALPTDVSAVIASDLQRSGKFSPVPTSKMPQTPFNESEV-NFDSWTSL 95

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK-----------------FFSSPA 149
           G   L+TG + +  +    V ++L DV  R Q+ G +                  F+  A
Sbjct: 96  GVDALLTGSIKQNEQGDYVVNYQLVDVV-RGQLTGGQSKALGSDGELVLSKDHVLFNKVA 154

Query: 150 S-----WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--IKNSLCVMDRDGAN 202
           +      R+ AH ISD +Y+ +TGE+G F +RI +V   VV+        L V D DG N
Sbjct: 155 TVKGPRMREYAHRISDLVYEQLTGERGAFMTRIAYV---VVNDKDRFPYQLRVADYDGYN 211

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDED----ILRVYLMD-TRIDRAPKRIGNFR 257
            R +  S+ Q L  P +SP+ QK+AY ++ +      I+ +Y  +  +I   P+  G   
Sbjct: 212 ERLVLRSK-QPLMSPAWSPDGQKLAYVSFQNGQAEIFIMNIYTGEREKITSYPRHNG--- 267

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               APRFS +G +  + + K   + +Y+ DL++    ++T +   N    + PD   ++
Sbjct: 268 ----APRFSPDGNKLALVLSKTGTLQVYTFDLKTRKLTQITRSRSNNTEPFWHPDGKSLI 323

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SDR GK Q+Y +        R++     +    + +P G  +     S   F +    
Sbjct: 324 FTSDRGGKPQIYQVNLGSGSIDRLTWQGSQNLGGQI-TPDGRFLVMVNRSDSGFNLAKQD 382

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAY 436
            +    ++L +    ++P+ +P+G  +++S   +      + SID  GR    L  T   
Sbjct: 383 LETGALQVLTKTLLDESPSIAPNGGMVVYSSIYNKKNVLSMVSID--GRFKARLPATNGR 440

Query: 437 ASDPQWVGFM 446
              P W  F+
Sbjct: 441 VRAPAWSPFL 450


>gi|224582567|ref|YP_002636365.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224467094|gb|ACN44924.1| translocation protein TolB precursor [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 434

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 183/415 (44%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN + +    Q
Sbjct: 23  LHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQ 82

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           +      + +   W++LG   +V G+V         + ++L D       ++ +  +   
Sbjct: 83  QPATAQEV-QPTAWSALGIDAVVVGQVTPNPDGSYNIAYQLVDTGGAPGTVLAQNSYKVN 141

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++ 
Sbjct: 142 KQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVV 199

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + + +++ +F     AP FS 
Sbjct: 200 HRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGSVRQVASFPRHNGAPAFSP 257

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q
Sbjct: 258 DGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQ 317

Query: 328 LYVMQSNGSDQKRI----SQDKEA------------------------------------ 347
           +Y M  NG   +RI    SQ+++A                                    
Sbjct: 318 VYKMNINGGAAQRITWEGSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSS 377

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 378 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 432


>gi|238790498|ref|ZP_04634267.1| hypothetical protein yfred0001_12280 [Yersinia frederiksenii ATCC
           33641]
 gi|238721442|gb|EEQ13113.1| hypothetical protein yfred0001_12280 [Yersinia frederiksenii ATCC
           33641]
          Length = 430

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 186/403 (46%), Gaps = 20/403 (4%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K++       ++  +V  DL+ S  FN I      Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEEIGAIVGADLRNSGKFNPIDAARMPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           + +    +     W +LG   +V G+V         V ++L D       ++ +  +   
Sbjct: 79  QPSTAAEVTP-AAWTALGIDAVVVGQVQPSADGSYVVSYQLVDTSGAAGSVLAQNQYKVT 137

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R  AHT SD++++ +TG KG F +RI +V ++   G   + L V D DG N +++ 
Sbjct: 138 KQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGKFPHELRVSDYDGYN-QFVV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               + L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS 
Sbjct: 196 HRSPEPLMSPAWSPDGSKIAYVTF--ESGKSALVIQTLANGAIRQVASFPRHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   S+ PDS  + + SD+ G+ Q
Sbjct: 254 DGSKLAFALSKSGSLNLYVMDLGSGQISQVTDGRSNNTEPSWFPDSQNLAYTSDQGGRPQ 313

Query: 328 LYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +Y +  NG   +RI    SQ++ A       SP G  +A    +G    I          
Sbjct: 314 VYKVNINGGAPQRITWEGSQNQNADV-----SPDGKFLALVSSNGGAQHIAKQDLVTGAV 368

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           ++L +    + P+ +P+G  +I+S  +    G+ L  +  +GR
Sbjct: 369 QVLTDTFLDETPSIAPNGTMVIYSSTQ--GLGAVLQLVSTDGR 409


>gi|15800456|ref|NP_286468.1| translocation protein TolB [Escherichia coli O157:H7 EDL933]
 gi|15830029|ref|NP_308802.1| translocation protein TolB [Escherichia coli O157:H7 str. Sakai]
 gi|16128715|ref|NP_415268.1| periplasmic protein [Escherichia coli str. K-12 substr. MG1655]
 gi|30062097|ref|NP_836268.1| translocation protein TolB [Shigella flexneri 2a str. 2457T]
 gi|74311264|ref|YP_309683.1| translocation protein TolB [Shigella sonnei Ss046]
 gi|89107598|ref|AP_001378.1| periplasmic protein [Escherichia coli str. K-12 substr. W3110]
 gi|110640948|ref|YP_668676.1| translocation protein TolB [Escherichia coli 536]
 gi|157154962|ref|YP_001461901.1| translocation protein TolB [Escherichia coli E24377A]
 gi|168779235|ref|ZP_02804242.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4076]
 gi|168786906|ref|ZP_02811913.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC869]
 gi|170020915|ref|YP_001725869.1| translocation protein TolB [Escherichia coli ATCC 8739]
 gi|170080407|ref|YP_001729727.1| periplasmic protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188496422|ref|ZP_03003692.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           53638]
 gi|189402960|ref|ZP_03006911.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4486]
 gi|208808867|ref|ZP_03251204.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4206]
 gi|208815738|ref|ZP_03256917.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4045]
 gi|209399861|ref|YP_002269374.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4115]
 gi|215485762|ref|YP_002328193.1| translocation protein TolB [Escherichia coli O127:H6 str. E2348/69]
 gi|217324392|ref|ZP_03440476.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. TW14588]
 gi|218557653|ref|YP_002390566.1| translocation protein TolB [Escherichia coli S88]
 gi|218688531|ref|YP_002396743.1| translocation protein TolB [Escherichia coli ED1a]
 gi|218694164|ref|YP_002401831.1| translocation protein TolB [Escherichia coli 55989]
 gi|218699112|ref|YP_002406741.1| translocation protein TolB [Escherichia coli IAI39]
 gi|218704067|ref|YP_002411586.1| translocation protein TolB [Escherichia coli UMN026]
 gi|238900005|ref|YP_002925801.1| periplasmic protein [Escherichia coli BW2952]
 gi|253774289|ref|YP_003037120.1| translocation protein TolB [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254160810|ref|YP_003043918.1| translocation protein TolB [Escherichia coli B str. REL606]
 gi|254791897|ref|YP_003076734.1| translocation protein TolB [Escherichia coli O157:H7 str. TW14359]
 gi|256021184|ref|ZP_05435049.1| translocation protein TolB [Shigella sp. D9]
 gi|256023657|ref|ZP_05437522.1| translocation protein TolB [Escherichia sp. 4_1_40B]
 gi|260842946|ref|YP_003220724.1| periplasmic protein TolB [Escherichia coli O103:H2 str. 12009]
 gi|260853975|ref|YP_003227866.1| periplasmic protein TolB [Escherichia coli O26:H11 str. 11368]
 gi|260866871|ref|YP_003233273.1| periplasmic protein TolB [Escherichia coli O111:H- str. 11128]
 gi|293403995|ref|ZP_06647989.1| tolB [Escherichia coli FVEC1412]
 gi|293409124|ref|ZP_06652700.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           B354]
 gi|293414025|ref|ZP_06656674.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           B185]
 gi|293433008|ref|ZP_06661436.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           B088]
 gi|297520453|ref|ZP_06938839.1| translocation protein TolB [Escherichia coli OP50]
 gi|298379775|ref|ZP_06989380.1| tolB [Escherichia coli FVEC1302]
 gi|306812853|ref|ZP_07447046.1| translocation protein TolB [Escherichia coli NC101]
 gi|307137353|ref|ZP_07496709.1| translocation protein TolB [Escherichia coli H736]
 gi|307314795|ref|ZP_07594389.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           W]
 gi|312965176|ref|ZP_07779413.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           2362-75]
 gi|312970819|ref|ZP_07784998.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           1827-70]
 gi|331641241|ref|ZP_08342376.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           H736]
 gi|331645891|ref|ZP_08346994.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           M605]
 gi|331651748|ref|ZP_08352767.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           M718]
 gi|331662100|ref|ZP_08363023.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA143]
 gi|331667107|ref|ZP_08367972.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA271]
 gi|331676422|ref|ZP_08377119.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           H591]
 gi|331682170|ref|ZP_08382792.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           H299]
 gi|67473560|sp|P0A855|TOLB_ECOLI RecName: Full=Protein tolB; Flags: Precursor
 gi|67473563|sp|P0A856|TOLB_ECOL6 RecName: Full=Protein tolB; Flags: Precursor
 gi|67473564|sp|P0A857|TOLB_ECO57 RecName: Full=Protein tolB; Flags: Precursor
 gi|118574579|sp|Q0TJV4|TOLB_ECOL5 RecName: Full=Protein tolB; Flags: Precursor
 gi|118574580|sp|Q1REI5|TOLB_ECOUT RecName: Full=Protein tolB; Flags: Precursor
 gi|119371062|sp|Q3Z464|TOLB_SHISS RecName: Full=Protein tolB; Flags: Precursor
 gi|166988075|sp|A7ZJC2|TOLB_ECO24 RecName: Full=Protein tolB; Flags: Precursor
 gi|189035982|sp|B1IXY9|TOLB_ECOLC RecName: Full=Protein tolB; Flags: Precursor
 gi|226705876|sp|B7MFZ3|TOLB_ECO45 RecName: Full=Protein tolB; Flags: Precursor
 gi|226705877|sp|B5YRE4|TOLB_ECO5E RecName: Full=Protein tolB; Flags: Precursor
 gi|226705878|sp|B7NMV9|TOLB_ECO7I RecName: Full=Protein tolB; Flags: Precursor
 gi|226705880|sp|B1X6S1|TOLB_ECODH RecName: Full=Protein tolB; Flags: Precursor
 gi|226705881|sp|B7N9Y9|TOLB_ECOLU RecName: Full=Protein tolB; Flags: Precursor
 gi|254764839|sp|B7ULM0|TOLB_ECO27 RecName: Full=Protein tolB; Flags: Precursor
 gi|254764840|sp|B7LAE7|TOLB_ECO55 RecName: Full=Protein tolB; Flags: Precursor
 gi|254764841|sp|B7MPN1|TOLB_ECO81 RecName: Full=Protein tolB; Flags: Precursor
 gi|259533852|sp|C4ZWL5|TOLB_ECOBW RecName: Full=Protein tolB; Flags: Precursor
 gi|12513673|gb|AAG55076.1|AE005252_12 periplasmic protein involved in the tonb-independent uptake of
           group A colicins [Escherichia coli O157:H7 str. EDL933]
 gi|1786961|gb|AAC73834.1| periplasmic protein [Escherichia coli str. K-12 substr. MG1655]
 gi|13360234|dbj|BAB34198.1| periplasmic protein TolB [Escherichia coli O157:H7 str. Sakai]
 gi|30040341|gb|AAP16074.1| periplasmic protein [Shigella flexneri 2a str. 2457T]
 gi|73854741|gb|AAZ87448.1| periplasmic protein [Shigella sonnei Ss046]
 gi|85674752|dbj|BAA35406.2| periplasmic protein [Escherichia coli str. K12 substr. W3110]
 gi|110342540|gb|ABG68777.1| TolB protein precursor [Escherichia coli 536]
 gi|157076992|gb|ABV16700.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           E24377A]
 gi|169755843|gb|ACA78542.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           ATCC 8739]
 gi|169888242|gb|ACB01949.1| periplasmic protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188491621|gb|EDU66724.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           53638]
 gi|189002974|gb|EDU71960.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4076]
 gi|189363589|gb|EDU82008.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4486]
 gi|189373020|gb|EDU91436.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC869]
 gi|208728668|gb|EDZ78269.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4206]
 gi|208732386|gb|EDZ81074.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4045]
 gi|209161261|gb|ACI38694.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4115]
 gi|209776388|gb|ACI86506.1| periplasmic protein TolB [Escherichia coli]
 gi|209776390|gb|ACI86507.1| periplasmic protein TolB [Escherichia coli]
 gi|209776392|gb|ACI86508.1| periplasmic protein TolB [Escherichia coli]
 gi|209776396|gb|ACI86510.1| periplasmic protein TolB [Escherichia coli]
 gi|215263834|emb|CAS08172.1| periplasmic protein TolB [Escherichia coli O127:H6 str. E2348/69]
 gi|217320613|gb|EEC29037.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. TW14588]
 gi|218350896|emb|CAU96594.1| periplasmic protein [Escherichia coli 55989]
 gi|218364422|emb|CAR02102.1| periplasmic protein [Escherichia coli S88]
 gi|218369098|emb|CAR16852.1| periplasmic protein [Escherichia coli IAI39]
 gi|218426095|emb|CAR06913.1| periplasmic protein [Escherichia coli ED1a]
 gi|218431164|emb|CAR12040.1| periplasmic protein [Escherichia coli UMN026]
 gi|222032476|emb|CAP75215.1| Protein tolB [Escherichia coli LF82]
 gi|238862004|gb|ACR64002.1| periplasmic protein [Escherichia coli BW2952]
 gi|242376502|emb|CAQ31206.1| tolB, subunit of The Tol-Pal Cell Envelope Complex, Colicin S4
           Transport System and The Colicin A Import System
           [Escherichia coli BL21(DE3)]
 gi|253325333|gb|ACT29935.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972711|gb|ACT38382.1| translocation protein TolB precursor [Escherichia coli B str.
           REL606]
 gi|253976905|gb|ACT42575.1| translocation protein TolB precursor [Escherichia coli BL21(DE3)]
 gi|254591297|gb|ACT70658.1| periplasmic protein [Escherichia coli O157:H7 str. TW14359]
 gi|257752624|dbj|BAI24126.1| periplasmic protein TolB [Escherichia coli O26:H11 str. 11368]
 gi|257758093|dbj|BAI29590.1| periplasmic protein TolB [Escherichia coli O103:H2 str. 12009]
 gi|257763227|dbj|BAI34722.1| periplasmic protein TolB [Escherichia coli O111:H- str. 11128]
 gi|260450106|gb|ACX40528.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           DH1]
 gi|281177883|dbj|BAI54213.1| TolB protein [Escherichia coli SE15]
 gi|281599944|gb|ADA72928.1| Protein tolB precursor [Shigella flexneri 2002017]
 gi|284920527|emb|CBG33589.1| colicin import protein [Escherichia coli 042]
 gi|291323827|gb|EFE63249.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           B088]
 gi|291428581|gb|EFF01606.1| tolB [Escherichia coli FVEC1412]
 gi|291434083|gb|EFF07056.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           B185]
 gi|291469592|gb|EFF12076.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           B354]
 gi|294492013|gb|ADE90769.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           IHE3034]
 gi|298279473|gb|EFI20981.1| tolB [Escherichia coli FVEC1302]
 gi|305853616|gb|EFM54055.1| translocation protein TolB [Escherichia coli NC101]
 gi|306905693|gb|EFN36221.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           W]
 gi|307552591|gb|ADN45366.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           ABU 83972]
 gi|307627846|gb|ADN72150.1| translocation protein TolB [Escherichia coli UM146]
 gi|309700962|emb|CBJ00259.1| colicin import protein [Escherichia coli ETEC H10407]
 gi|310336580|gb|EFQ01747.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           1827-70]
 gi|312290267|gb|EFR18150.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           2362-75]
 gi|312945264|gb|ADR26091.1| translocation protein TolB [Escherichia coli O83:H1 str. NRG 857C]
 gi|313649617|gb|EFS14041.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri 2a str. 2457T]
 gi|315059983|gb|ADT74310.1| periplasmic protein [Escherichia coli W]
 gi|315135397|dbj|BAJ42556.1| tolB [Escherichia coli DH1]
 gi|315614616|gb|EFU95258.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           3431]
 gi|320179419|gb|EFW54376.1| translocation protein TolB [Shigella boydii ATCC 9905]
 gi|320193145|gb|EFW67785.1| translocation protein TolB [Escherichia coli O157:H7 str. EC1212]
 gi|320198140|gb|EFW72744.1| translocation protein TolB [Escherichia coli EC4100B]
 gi|320637998|gb|EFX07767.1| translocation protein TolB [Escherichia coli O157:H7 str. G5101]
 gi|320643394|gb|EFX12574.1| translocation protein TolB [Escherichia coli O157:H- str. 493-89]
 gi|320648688|gb|EFX17324.1| translocation protein TolB [Escherichia coli O157:H- str. H 2687]
 gi|320654326|gb|EFX22379.1| translocation protein TolB [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320659958|gb|EFX27500.1| translocation protein TolB [Escherichia coli O55:H7 str. USDA 5905]
 gi|320664784|gb|EFX31922.1| translocation protein TolB [Escherichia coli O157:H7 str. LSU-61]
 gi|323153744|gb|EFZ39991.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           EPECa14]
 gi|323158792|gb|EFZ44805.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           E128010]
 gi|323163899|gb|EFZ49709.1| tol-Pal system beta propeller repeat protein TolB [Shigella sonnei
           53G]
 gi|323180020|gb|EFZ65576.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           1180]
 gi|323185099|gb|EFZ70465.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           1357]
 gi|323191085|gb|EFZ76350.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           RN587/1]
 gi|323379457|gb|ADX51725.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           KO11]
 gi|323942963|gb|EGB39127.1| tol-Pal system beta propeller TolB [Escherichia coli E482]
 gi|323953134|gb|EGB49001.1| tol-Pal system beta propeller TolB [Escherichia coli H252]
 gi|323958484|gb|EGB54190.1| tol-Pal system beta propeller TolB [Escherichia coli H263]
 gi|323967343|gb|EGB62764.1| tol-Pal system beta propeller TolB [Escherichia coli M863]
 gi|323976279|gb|EGB71369.1| tol-Pal system beta propeller TolB [Escherichia coli TW10509]
 gi|324116282|gb|EGC10203.1| tol-Pal system beta propeller TolB [Escherichia coli E1167]
 gi|326341511|gb|EGD65301.1| translocation protein TolB [Escherichia coli O157:H7 str. 1044]
 gi|326345730|gb|EGD69469.1| translocation protein TolB [Escherichia coli O157:H7 str. 1125]
 gi|327254429|gb|EGE66051.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           STEC_7v]
 gi|330910491|gb|EGH39001.1| TolB protein precursor [Escherichia coli AA86]
 gi|331038039|gb|EGI10259.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           H736]
 gi|331044643|gb|EGI16770.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           M605]
 gi|331050026|gb|EGI22084.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           M718]
 gi|331060522|gb|EGI32486.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA143]
 gi|331065463|gb|EGI37356.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA271]
 gi|331075915|gb|EGI47212.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           H591]
 gi|331080594|gb|EGI51770.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           H299]
 gi|332093801|gb|EGI98855.1| tol-Pal system beta propeller repeat protein TolB [Shigella boydii
           5216-82]
 gi|332342077|gb|AEE55411.1| translocation protein TolB [Escherichia coli UMNK88]
 gi|332760891|gb|EGJ91179.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri 4343-70]
 gi|332761319|gb|EGJ91605.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri 2747-71]
 gi|332763940|gb|EGJ94178.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri K-671]
 gi|332768161|gb|EGJ98346.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri 2930-71]
 gi|333007349|gb|EGK26829.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri VA-6]
 gi|333008017|gb|EGK27493.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri K-218]
 gi|333010141|gb|EGK29576.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri K-272]
 gi|333021093|gb|EGK40350.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri K-227]
 gi|333021479|gb|EGK40729.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri K-304]
          Length = 430

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 187/421 (44%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 19  LHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRA 74

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 75  RLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 131

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 132 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 190

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 191 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 247

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD
Sbjct: 248 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 307

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 308 QAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 367

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 368 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 427

Query: 399 P 399
           P
Sbjct: 428 P 428


>gi|152969308|ref|YP_001334417.1| translocation protein TolB [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|150954157|gb|ABR76187.1| translocation protein TolB precursor [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 418

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 183/415 (44%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   ++         V  +V+ DL+ S  FN + +    Q
Sbjct: 7   LHAEVRIEITQGVDSARPIGVVPFQWAGQGAAPEDVGGIVAADLRNSGKFNPLDRSRLPQ 66

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK--QIIGKKFFSS 147
           + T+   + +   W++LG   +V G+V +      +V ++L D        +    F  +
Sbjct: 67  QPTSAQEV-QPAAWSALGIDAVVVGQVTQNPDGSYQVAYQLVDTGGAPGTTLAQGSFKVT 125

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
               R  AH  SD +++ +TG KG F +RI +V +    G     L V D DG N ++L 
Sbjct: 126 KQYLRYAAHAASDAVFEKLTGIKGAFRTRIAYVVQKN-GGQYPYELRVSDYDGYN-QFLV 183

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + + ++I +F     AP FS 
Sbjct: 184 HRSSQPLMSPAWSPDGSKLAYVTF--ESGRSALVVQTLANASVRQIASFPQHNGAPAFSP 241

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++TN    N   S+ PDS  + F SD+ G+ Q
Sbjct: 242 DGSKLAFALSKTGSLNLYVMDLGSGQIRQVTNGRSNNTEPSWFPDSQNLAFTSDQAGRPQ 301

Query: 328 LYVMQSNGSDQKRI----SQDKEA------------------------------------ 347
           +Y +  NG   +RI    SQ+++A                                    
Sbjct: 302 VYKVNINGGTPQRITWEGSQNQDADVSADGKTMVMVSSAGGQQHIAKQDLETGGVQVLSS 361

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 362 TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 416


>gi|71892116|ref|YP_277848.1| hypothetical protein BPEN_348 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|119371035|sp|Q492W9|TOLB_BLOPB RecName: Full=Protein tolB; Flags: Precursor
 gi|71796222|gb|AAZ40973.1| TolB [Candidatus Blochmannia pennsylvanicus str. BPEN]
          Length = 453

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 197/425 (46%), Gaps = 23/425 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSAN------YSPVSIAFTKFVSIDELGGKVS 66
           + +++ L++ L        +H  +    N+A+      ++ VS  + K +SI++    ++
Sbjct: 18  VSLSIMLIIFLWKPALLADMHIEITCGVNAAHPIAVIPFTCVSNQYNKSISIED----IA 73

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITN-PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
            +++ DL+ S  FN I  +    K T   D IP F  W  LG  ++V G V     +   
Sbjct: 74  SIIAADLRNSSKFNTIPVEYLPHKPTKVSDVIPTF--WEKLGINIIVLGTVHINYDESYI 131

Query: 126 VEFRLWDVKDRKQ-IIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           + + L D       II +  +S    W R +AH IS++I++ +TG KG F +RI +V   
Sbjct: 132 ISYHLIDTSSNPALIISENQYSVEKKWLRYVAHAISNEIFEKLTGIKGAFCTRIAYVLR- 190

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILRVYLM 242
           + +      L + D DG N   +  S +  L  P +SP+ +K+AY T+      L +  +
Sbjct: 191 IHNDHYPYELYISDYDGHNQISICRSTEP-LMSPAWSPDGKKIAYVTFASGHSELVIQAL 249

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +T +      I +F     AP FS + K+   S+ K  ++++Y +DL+S    +LT    
Sbjct: 250 NTGLVN---NIVSFPGHNGAPSFSPDCKKLAFSLSKTGSLNLYIMDLESGEITQLTKNRN 306

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N   S+ PD+  I + SD+ G  Q+Y +    ++ +R+S     S  +P  S  G  I 
Sbjct: 307 NNTEPSWFPDNQNIAYTSDQGGSPQIYKINVKTTEIQRLSW-LHTSNQNPNVSSDGTFII 365

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-KKDGDTGSKLYSI 421
                  K  I  +     QE +L +     +P+ +P+   +++S   KD  T S L  I
Sbjct: 366 MVNRHQGKQNIAKLNLLTGQEEILTDTLLADSPSIAPNNTMVLYSNINKDLTTKSNLELI 425

Query: 422 DLNGR 426
            ++G 
Sbjct: 426 SIDGH 430


>gi|310767030|gb|ADP11980.1| translocation protein TolB [Erwinia sp. Ejp617]
          Length = 430

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 209/444 (47%), Gaps = 30/444 (6%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVA-TNSANYS-PVSIAFTKFVSIDELGGKVSEVVSK 71
           ++ L +L++ +        HA V++  T   N + P+ +   K+         +  +V+ 
Sbjct: 6   RVALSVLMLFV-----AVAHAEVRIEITQGVNTARPIGVVPFKWDGPGAAPEDIGGIVAA 60

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+ S  FN I +    Q+   P S+   Q   W +LG   ++ G+V         V ++
Sbjct: 61  DLRNSGKFNPIDRARLPQQ---PTSVAEVQPAAWTALGIDAVIVGQVQPGADGSYTVSYQ 117

Query: 130 LWDVK-DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           L D   ++  ++ +  F     W R  AHT SD+ ++ +T  KG F +RI +V ++   G
Sbjct: 118 LVDTSGNQGAVLAQNQFKVTKQWLRYAAHTASDESFEKLTAIKGAFRTRIAYVVQTN-GG 176

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L V D DG N +++     Q L  P +SP+  KVAY T+  E      ++ T  +
Sbjct: 177 QFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTF--ESGKSALVIQTLAN 233

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+  + +   
Sbjct: 234 GAIRQVASFPRHNGAPSFSPDGSKLAFALSKTGSLNLYVMDVGSGQIRQITDGRYNSTEP 293

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++ PDS  + + SD+ G+ Q+Y +  NG   +RI+ D   +    V S    ++  +  S
Sbjct: 294 TWFPDSQSLAYTSDQAGRPQIYKIGVNGGTAQRITWDGAQNQDADVSSDGKSMVMISTNS 353

Query: 368 GEKFAIGVMKKD---GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           G +    V ++D   G+ ++L   D+ L + P+ +P+G  +I+S  +    GS L  +  
Sbjct: 354 GAQH---VARQDLVTGAVQQL--TDTFLDETPSLAPNGTMVIYSSTQ--GMGSVLQLVST 406

Query: 424 NGR-NETLINTPAYASDPQWVGFM 446
           +GR    L  T      P W  ++
Sbjct: 407 DGRFKARLPATDGQVKFPAWSPYL 430


>gi|322833831|ref|YP_004213858.1| Tol-Pal system beta propeller repeat protein TolB [Rahnella sp.
           Y9602]
 gi|321169032|gb|ADW74731.1| Tol-Pal system beta propeller repeat protein TolB [Rahnella sp.
           Y9602]
          Length = 430

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 187/400 (46%), Gaps = 14/400 (3%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++          P+ +   K+         V  +V+ DL+ S  FN I      Q
Sbjct: 19  VHAEVRIEITQGVDTARPIGVVPFKWAGPGTPPEDVGGIVAADLRNSGKFNPIDASRMPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           + T+   +     W +LG   +V G+V         V ++L D       ++ +  +   
Sbjct: 79  QPTSAAEVTP-AAWTALGIDAVVIGQVQPAADGSYVVSYQLVDTSGAPGTVLAQNQYKVT 137

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R  AHT SD++++ +TG KG F +RI ++ ++   G     L V D DG N +++ 
Sbjct: 138 KQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYIVQTN-GGKFPYELRVADYDGYN-QFVV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               + L  P +SP+  K+AY T+  E      ++ T  + A K+I +F     AP FS 
Sbjct: 196 HRSPEPLMSPAWSPDGSKLAYVTF--ESGRSALVVQTLANGAIKQIASFPRHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ KD ++++Y ++L S    ++TN    N   ++ PDS  + F SD+ G+ Q
Sbjct: 254 DGSKLAFALSKDGSLNLYVMNLSSGQISQVTNGRSNNTEPTWFPDSQNLAFTSDQGGRPQ 313

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y +  NG   +R++ +   +    V +    L+  +  SG +    +    G+ + L  
Sbjct: 314 VYKVNINGGAPQRLTWEGSQNQDSDVSTDGKFLVMVSSASGTQHIAKLDLATGAVQTL-- 371

Query: 388 EDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            D+ L + P+ +P+G  +I+S  +    GS L  +  +GR
Sbjct: 372 TDTFLDETPSLAPNGTMVIYSSSQ--GLGSVLQLVSTDGR 409


>gi|167586273|ref|ZP_02378661.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           ubonensis Bu]
          Length = 431

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 191/439 (43%), Gaps = 16/439 (3%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           +L  +  +   L+  G    ++ +A V V       +   IA   F +   L  +V+ +V
Sbjct: 6   KLGFRALVASCLIAAG----SAANAQVNVLITGVGSTQFPIATANFANEAGLPQQVTSIV 61

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
             DL RS  F  I  D+    +    S+     W + GA   V G V ++   + +V F 
Sbjct: 62  RADLARSGKFTNI--DAGSTPVPETASV-DLGAWKAKGANAFVAGSVNRDASGQYKVNFI 118

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V +S      
Sbjct: 119 LYDTVKQQSLGGLSLTANDGTLRTAGHKIADYIYQKLLGTRGVFATRLSYVIKSGN---- 174

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D DG N R    S + I+  P +SPN  KVAY +++ +  + VY+ D    R 
Sbjct: 175 RYQLQISDSDGQNPRIALSSTEPII-SPAWSPNGTKVAYVSFERKKPI-VYIHDLPTGRR 232

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              + + +    AP +S + +   +++       IY+V+       RLT +  I+    Y
Sbjct: 233 -YIVSDQKGNNSAPAWSPDSQTLSVALSLTGNTQIYAVNSTGGGLRRLTQSNSIDTEPFY 291

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS 367
           SPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+   +
Sbjct: 292 SPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRVSPDGRLLAYISRT 351

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G  F + V          +   S+ ++P+++ +G+ L+++ +  G         D +   
Sbjct: 352 GGGFKLYVQDLQTGAANAITNTSHDESPSFAANGQYLLYATQSGGRNVLAAVPSDGSAPP 411

Query: 428 ETLINTPAYASDPQWVGFM 446
           + L        +P W  FM
Sbjct: 412 QILSVQGGSVREPSWGPFM 430


>gi|82776018|ref|YP_402365.1| translocation protein TolB [Shigella dysenteriae Sd197]
 gi|119371061|sp|Q32II1|TOLB_SHIDS RecName: Full=Protein tolB; Flags: Precursor
 gi|81240166|gb|ABB60876.1| periplasmic protein [Shigella dysenteriae Sd197]
          Length = 430

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 188/421 (44%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 19  LHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRA 74

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 75  RLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 131

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R  +HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 132 NSYKVNKQWLRYASHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 190

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 191 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 247

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD
Sbjct: 248 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 307

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 308 QAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 367

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 368 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 427

Query: 399 P 399
           P
Sbjct: 428 P 428


>gi|12084602|pdb|1C5K|A Chain A, The Structure Of Tolb, An Essential Component Of The Tol-
           Dependent Translocation System And Its Interactions With
           The Translocation Domain Of Colicin E9
 gi|114794794|pdb|2IVZ|A Chain A, Structure Of Tolb In Complex With A Peptide Of The Colicin
           E9 T-Domain
 gi|114794795|pdb|2IVZ|B Chain B, Structure Of Tolb In Complex With A Peptide Of The Colicin
           E9 T-Domain
 gi|114794796|pdb|2IVZ|C Chain C, Structure Of Tolb In Complex With A Peptide Of The Colicin
           E9 T-Domain
 gi|114794797|pdb|2IVZ|D Chain D, Structure Of Tolb In Complex With A Peptide Of The Colicin
           E9 T-Domain
          Length = 439

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 187/421 (44%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 20  LHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRA 75

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 76  RLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 132

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 133 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 191

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 192 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 248

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD
Sbjct: 249 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 308

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 309 QAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 368

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 369 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 428

Query: 399 P 399
           P
Sbjct: 429 P 429


>gi|26246709|ref|NP_752749.1| translocation protein TolB [Escherichia coli CFT073]
 gi|91209774|ref|YP_539760.1| translocation protein TolB [Escherichia coli UTI89]
 gi|117622931|ref|YP_851844.1| translocation protein TolB [Escherichia coli APEC O1]
 gi|170683440|ref|YP_001742851.1| translocation protein TolB [Escherichia coli SMS-3-5]
 gi|209917991|ref|YP_002292075.1| translocation protein TolB [Escherichia coli SE11]
 gi|227884293|ref|ZP_04002098.1| TolB protein [Escherichia coli 83972]
 gi|237707297|ref|ZP_04537778.1| translocation protein TolB [Escherichia sp. 3_2_53FAA]
 gi|261224451|ref|ZP_05938732.1| translocation protein TolB [Escherichia coli O157:H7 str. FRIK2000]
 gi|261254557|ref|ZP_05947090.1| translocation protein TolB [Escherichia coli O157:H7 str. FRIK966]
 gi|300816390|ref|ZP_07096612.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 107-1]
 gi|300822971|ref|ZP_07103106.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 119-7]
 gi|300900747|ref|ZP_07118896.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 198-1]
 gi|300906999|ref|ZP_07124668.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 84-1]
 gi|300918401|ref|ZP_07135001.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 115-1]
 gi|300926144|ref|ZP_07141957.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 182-1]
 gi|300929454|ref|ZP_07144922.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 187-1]
 gi|300937787|ref|ZP_07152584.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 21-1]
 gi|300947179|ref|ZP_07161389.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 116-1]
 gi|300957689|ref|ZP_07169878.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 175-1]
 gi|300992345|ref|ZP_07179868.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 200-1]
 gi|300993166|ref|ZP_07180249.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 45-1]
 gi|301020788|ref|ZP_07184852.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 69-1]
 gi|301027078|ref|ZP_07190450.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 196-1]
 gi|301051340|ref|ZP_07198163.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 185-1]
 gi|301305228|ref|ZP_07211326.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 124-1]
 gi|301327933|ref|ZP_07221104.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 78-1]
 gi|301648045|ref|ZP_07247812.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 146-1]
 gi|309797455|ref|ZP_07691847.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 145-7]
 gi|331656759|ref|ZP_08357721.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA206]
 gi|332282411|ref|ZP_08394824.1| translocation protein TolB [Shigella sp. D9]
 gi|26107108|gb|AAN79292.1|AE016757_196 TolB protein precursor [Escherichia coli CFT073]
 gi|148020|gb|AAA24684.1| tolB [Escherichia coli]
 gi|91071348|gb|ABE06229.1| periplasmic protein involved in the tonB-independent uptake of
           group A colicins [Escherichia coli UTI89]
 gi|115512055|gb|ABJ00130.1| TolB protein precursor [Escherichia coli APEC O1]
 gi|170521158|gb|ACB19336.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           SMS-3-5]
 gi|209911250|dbj|BAG76324.1| TolB protein [Escherichia coli SE11]
 gi|226898507|gb|EEH84766.1| translocation protein TolB [Escherichia sp. 3_2_53FAA]
 gi|227839045|gb|EEJ49511.1| TolB protein [Escherichia coli 83972]
 gi|299879412|gb|EFI87623.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 196-1]
 gi|300297002|gb|EFJ53387.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 185-1]
 gi|300305362|gb|EFJ59882.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 200-1]
 gi|300315607|gb|EFJ65391.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 175-1]
 gi|300355806|gb|EFJ71676.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 198-1]
 gi|300398434|gb|EFJ81972.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 69-1]
 gi|300401220|gb|EFJ84758.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 84-1]
 gi|300406696|gb|EFJ90234.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 45-1]
 gi|300414464|gb|EFJ97774.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 115-1]
 gi|300417843|gb|EFK01154.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 182-1]
 gi|300453165|gb|EFK16785.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 116-1]
 gi|300457198|gb|EFK20691.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 21-1]
 gi|300462563|gb|EFK26056.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 187-1]
 gi|300524512|gb|EFK45581.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 119-7]
 gi|300531080|gb|EFK52142.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 107-1]
 gi|300839540|gb|EFK67300.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 124-1]
 gi|300845576|gb|EFK73336.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 78-1]
 gi|301073871|gb|EFK88677.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 146-1]
 gi|308118979|gb|EFO56241.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 145-7]
 gi|315257659|gb|EFU37627.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 85-1]
 gi|315287145|gb|EFU46557.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 110-3]
 gi|315292654|gb|EFU52006.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 153-1]
 gi|315299257|gb|EFU58509.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 16-3]
 gi|323938279|gb|EGB34537.1| tol-Pal system beta propeller protein TolB [Escherichia coli E1520]
 gi|323946994|gb|EGB43008.1| tol-Pal system beta propeller protein TolB [Escherichia coli H120]
 gi|323963121|gb|EGB58691.1| tol-Pal system beta propeller TolB [Escherichia coli H489]
 gi|324009566|gb|EGB78785.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 57-2]
 gi|324010463|gb|EGB79682.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 60-1]
 gi|324020352|gb|EGB89571.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 117-3]
 gi|331055007|gb|EGI27016.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA206]
 gi|332104763|gb|EGJ08109.1| translocation protein TolB [Shigella sp. D9]
          Length = 431

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 187/421 (44%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 20  LHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRA 75

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 76  RLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 132

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 133 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 191

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 192 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 248

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD
Sbjct: 249 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 308

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 309 QAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 368

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 369 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 428

Query: 399 P 399
           P
Sbjct: 429 P 429


>gi|261278785|pdb|3IAX|A Chain A, The Crystal Structure Of The Tolb Box Of Colicin A In
           Complex With Tolb Reveals Important Differences In The
           Recruitment Of The Common Tolb Translocation Portal Used
           By Group A Colicins
          Length = 438

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 187/421 (44%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 19  LHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRA 74

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 75  RLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 131

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 132 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 190

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 191 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 247

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD
Sbjct: 248 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 307

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 308 QAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 367

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 368 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 427

Query: 399 P 399
           P
Sbjct: 428 P 428


>gi|170769037|ref|ZP_02903490.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia
           albertii TW07627]
 gi|170122109|gb|EDS91040.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia
           albertii TW07627]
          Length = 430

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 187/426 (43%), Gaps = 64/426 (15%)

Query: 27  FFPTSIHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFN 80
            +  ++HA V +     N S   I    F       + +++GG    +V+ DL+ S  FN
Sbjct: 14  LWTAAVHATVSIDITDWNDSARPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFN 69

Query: 81  LISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK- 137
            + +    Q+   P S    Q   W++LG   +V G+V         V ++L D      
Sbjct: 70  PLDRARLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPG 126

Query: 138 QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
            ++ +  +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V 
Sbjct: 127 TVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVS 185

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D DG N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F
Sbjct: 186 DYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASF 242

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  +
Sbjct: 243 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNL 302

Query: 317 VFESDREGKEQLYVMQSNGSDQKRI----SQDKEA------------------------- 347
            F SD+ G+ Q+Y +  NG   +RI    SQ+++A                         
Sbjct: 303 AFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQD 362

Query: 348 -----------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQ 393
                      ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++
Sbjct: 363 LVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVK 422

Query: 394 APTWSP 399
            P WSP
Sbjct: 423 FPAWSP 428


>gi|187733089|ref|YP_001879397.1| translocation protein TolB [Shigella boydii CDC 3083-94]
 gi|226705895|sp|B2TUC6|TOLB_SHIB3 RecName: Full=Protein tolB; Flags: Precursor
 gi|187430081|gb|ACD09355.1| tol-Pal system beta propeller repeat protein TolB [Shigella boydii
           CDC 3083-94]
          Length = 430

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 187/421 (44%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 19  LHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRA 74

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 75  RLPQQ---PGSAQEVQPSAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 131

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 132 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 190

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 191 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 247

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD
Sbjct: 248 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 307

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 308 QAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 367

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 368 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 427

Query: 399 P 399
           P
Sbjct: 428 P 428


>gi|145219969|ref|YP_001130678.1| WD40 domain-containing protein [Prosthecochloris vibrioformis DSM
           265]
 gi|145206133|gb|ABP37176.1| WD-40 repeat-containing protein [Chlorobium phaeovibrioides DSM
           265]
          Length = 442

 Score =  125 bits (313), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 170/351 (48%), Gaps = 26/351 (7%)

Query: 100 FQDWNSLGAQVLVTGRVI-KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI 158
           F   NS+GA+    G V+ K G   L +E  ++D    + I+ K +    +  R IAH  
Sbjct: 105 FGALNSVGAEFYAGGAVVQKSGNVVLSME--VYDTLGGRPILRKTYTGKESDLRSIAHAF 162

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
             D+ + +TG    F S+++FVS    SG  +  +C  D DG  +R +T +R  +   P 
Sbjct: 163 CADLVELLTGRPSVFGSKVVFVSNR--SGFKEIYMC--DYDGHGMRQMTNTRS-LALTPV 217

Query: 219 FSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-ISV 276
            SP+ Q +AY  Y      L +  +     R+  R GN     + P + SN + A  +S 
Sbjct: 218 LSPDGQHLAYTDYASGRPRLSILDLAGGKRRSVARSGNS----IDPGWRSNAEVATTLSF 273

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           Q D+  +IY V    +   R+TN+  I++S S+SPD +++ F S R    Q++++     
Sbjct: 274 QGDQ--EIYLVRPDGSLARRVTNSRGIDLSPSFSPDGNKMAFVSSRTSAPQIFILDLQTG 331

Query: 337 DQKRISQDKEASY-FDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNL- 392
             KR++ +   SY   P WSPQGD IA++    +GE   I  +  DGS  R L   S   
Sbjct: 332 QTKRLTYN--GSYNTQPSWSPQGDKIAYSTMEKNGE-INIFTINTDGSSLRQLTSGSRQN 388

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQW 442
           ++P+WSP G  ++F+  + G    KL+ ++  G  +  L+        P W
Sbjct: 389 ESPSWSPGGDMIVFTSSRQGQ--KKLFVMNAAGGGQRRLLQLEGEQMQPSW 437



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 86/158 (54%), Gaps = 5/158 (3%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG+  R +T SR  I   P FSP+  K+A+ +       +++++D +  +  KR+    S
Sbjct: 285 DGSLARRVTNSRG-IDLSPSFSPDGNKMAFVS-SRTSAPQIFILDLQTGQT-KRLTYNGS 341

Query: 259 MILAPRFSSNG-KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               P +S  G K A  +++K+  ++I++++   ++  +LT+    N S S+SP    IV
Sbjct: 342 YNTQPSWSPQGDKIAYSTMEKNGEINIFTINTDGSSLRQLTSGSRQNESPSWSPGGDMIV 401

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           F S R+G+++L+VM + G  Q+R+ Q  E     P WS
Sbjct: 402 FTSSRQGQKKLFVMNAAGGGQRRLLQ-LEGEQMQPSWS 438


>gi|157962385|ref|YP_001502419.1| translocation protein TolB [Shewanella pealeana ATCC 700345]
 gi|189035989|sp|A8H5P7|TOLB_SHEPA RecName: Full=Protein tolB; Flags: Precursor
 gi|157847385|gb|ABV87884.1| Tol-Pal system beta propeller repeat TolB [Shewanella pealeana ATCC
           700345]
          Length = 440

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 195/413 (47%), Gaps = 25/413 (6%)

Query: 50  IAFTKFV--SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLG 107
           IA   FV      +  ++S+VV  DL RS  F+   + S  Q+  +  +      W +  
Sbjct: 37  IAVIPFVWQGTGPMPSQISDVVMSDLARSGTFSPADELSLPQRGISTLAQFNASAWMAQP 96

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWD-VKDRKQ----------IIGKKFFSSPASWRKIAH 156
           A+ +V G +   G D+  V F L D VK + Q          I  ++   S A +R+  H
Sbjct: 97  AEAVVMGSIKPYGGDKYLVSFELIDLVKAQLQSDSMSTKDLVIDSRETVISAAQFRQYGH 156

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQIL 214
            ISD +Y+ +TG +G F +R+ +V   VV+   K+   L + D DG N + L  S +  L
Sbjct: 157 RISDVVYEKLTGIRGAFLTRVAYV---VVNHGEKSPYKLMIADYDGYNEQMLLRSPEP-L 212

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+ Q +AY ++++     V++ +    +  K I +F  +  AP FS +GK+  +
Sbjct: 213 MSPSWSPDGQSLAYVSFENRKA-EVFVQNIYTQQRTK-ITSFDGINGAPVFSPDGKKLAV 270

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ KD   ++Y VD+ + A +R+TN   I+   S+ PD   ++  S+R G+ QLY +  +
Sbjct: 271 TLSKDGQPEVYVVDIATKAIKRVTNHYAIDTEPSWFPDGKSLLITSERGGRPQLYRVFLD 330

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                R++ + E +    + SP G  I F      KF I  M  +    ++L      ++
Sbjct: 331 SGKISRLTFEGEWNLGGSI-SPDGRSIIFVNRINGKFNIARMDLETRFMQVLTSTRLDES 389

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           P+ +P+G  +I+     G     L ++ ++GR    L         P W  F+
Sbjct: 390 PSVAPNGTMVIYGTTYQGK--QVLAAVSMDGRFKARLPAGQGEVKSPSWSPFL 440


>gi|167623622|ref|YP_001673916.1| translocation protein TolB [Shewanella halifaxensis HAW-EB4]
 gi|189035988|sp|B0TPX8|TOLB_SHEHH RecName: Full=Protein tolB; Flags: Precursor
 gi|167353644|gb|ABZ76257.1| Tol-Pal system beta propeller repeat TolB [Shewanella halifaxensis
           HAW-EB4]
          Length = 440

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 196/413 (47%), Gaps = 25/413 (6%)

Query: 50  IAFTKFV--SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLG 107
           IA   FV      +  ++S+VV  DL RS  F+   + S  Q+  +  +      W +  
Sbjct: 37  IAVIPFVWQGTGPMPSQISDVVMSDLARSGTFSPADELSLPQRGISTLAQFNASAWMTQP 96

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWD-VKDRKQ----------IIGKKFFSSPASWRKIAH 156
           A+ +V G +   G D+  V F L D VK + Q          I  ++   + A +R+  H
Sbjct: 97  AEAVVMGSIKPYGGDKYLVSFELIDLVKAQLQPDSQSAQDLVIDSRETIITAAQFRQYGH 156

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS--LCVMDRDGANIRYLTPSRDQIL 214
            ISD +Y+ +TG +G F +RI +V   VV+   K+   L + D DG N + L  S +  L
Sbjct: 157 RISDVVYEKLTGIRGAFLTRIAYV---VVNHGEKSPYKLMISDYDGYNEQMLLRSPEP-L 212

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+ Q++AY ++++     +Y+ +    +    + +F  +  AP FS +GK+  +
Sbjct: 213 MSPSWSPDGQRLAYVSFENRKA-EIYVQNIYTQQR-TNVTSFDGINGAPVFSPDGKKLAV 270

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ KD   ++Y VD+ + A +R+TN   I+   S+ PD   ++  S+R G+ QLY +  +
Sbjct: 271 TLSKDGQPEVYVVDIATKAIKRVTNHYAIDTEPSWFPDGKSLLITSERGGRPQLYRVFLD 330

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                R++ + E +    + +P G  I F   +  KF I  M  +    ++L      ++
Sbjct: 331 SGKISRLTFEGEWNLGGSI-APDGRSIIFVNRTNGKFNIARMDLETRFMQVLTSTRLDES 389

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           P+ +P+G  +I+     G     L ++ ++GR    L         P W  F+
Sbjct: 390 PSVAPNGTMVIYGTTYQGK--QVLAAVSMDGRFKARLPVGQGEVKSPSWSPFL 440


>gi|294637421|ref|ZP_06715712.1| Tol-Pal system beta propeller repeat protein TolB [Edwardsiella
           tarda ATCC 23685]
 gi|291089414|gb|EFE21975.1| Tol-Pal system beta propeller repeat protein TolB [Edwardsiella
           tarda ATCC 23685]
          Length = 430

 Score =  124 bits (312), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 194/415 (46%), Gaps = 18/415 (4%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           +  LLVL        +   +    +SA   P+ +   K++        +  +++ DL+ S
Sbjct: 8   MVGLLVLWASVLHAEVRIVITQGVDSAR--PIGVVPFKWMGPGAAPENIGGIIAADLRNS 65

Query: 77  DVFNLISQDSFKQK-ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK- 134
             FN I      Q+  T  +  P    W +LG   +V G+V         V ++L D   
Sbjct: 66  GKFNPIDASRMPQQPATAAEVTP--AAWTALGIDAVVVGQVQPGADGSYLVSYQLVDTSG 123

Query: 135 DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
           +   ++ +  +     W R  AHT SD++++ +TG KG F +RI +V ++   G     L
Sbjct: 124 NPGSVLAQNQYKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYEL 182

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V D DG N +++     + L  P +S +  K+AY T+  E      ++ T  + A +++
Sbjct: 183 RVADYDGYN-QFVVHRSAEPLMSPAWSSDGSKLAYVTF--ESGRSALVIQTLSNGAIRQV 239

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +F     +P FS +G +   ++ K  ++++Y +DL S A  ++T+    N   S+ PDS
Sbjct: 240 ASFPRHNGSPAFSPDGTKLAFALSKTGSLNLYVMDLASGAIRQVTDGRSNNTEPSWFPDS 299

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             + F SD+ G+ Q+Y +  NG   +R++ +  A   D   SP G  +     S    A 
Sbjct: 300 QNLAFTSDQAGRPQIYKININGGAAQRLTWEG-AQNQDAEVSPDGKFLVMV--SSNAGAQ 356

Query: 374 GVMKKD-GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            + K D G+    ++ D+ L + P+ +P+G  +I+S  +    GS L  + ++GR
Sbjct: 357 HIAKLDLGTNATQVLTDTFLDETPSIAPNGTMVIYSSTQ--GLGSVLQLVSIDGR 409


>gi|258621415|ref|ZP_05716449.1| translocation protein TolB precursor [Vibrio mimicus VM573]
 gi|258626844|ref|ZP_05721651.1| translocation protein TolB precursor [Vibrio mimicus VM603]
 gi|258580891|gb|EEW05833.1| translocation protein TolB precursor [Vibrio mimicus VM603]
 gi|258586803|gb|EEW11518.1| translocation protein TolB precursor [Vibrio mimicus VM573]
          Length = 441

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 206/451 (45%), Gaps = 36/451 (7%)

Query: 22  VLIG-GFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF 79
           +LIG GF   +  A   V T+  + + P++I   K+    +L   VS V++ DLQRS  F
Sbjct: 1   MLIGTGFTNVANAALELVITDGIDSARPIAIIPFKWEGGTKLPEDVSAVIASDLQRSGKF 60

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD------- 132
           + +      Q   + + +  F  W SLG   L+TG + +  +    + ++L D       
Sbjct: 61  SPVPTSKMPQTPYSEEQV-NFGKWTSLGVDSLLTGTITQNAEGSYVISYQLVDIVRGQLT 119

Query: 133 -------------VKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRIL 178
                        V  +  ++  K  + P S  R+ AH I+D +Y+ +TGE+G F +RI 
Sbjct: 120 QGQSKALSPDGQLVLSKDHVLFNKVATVPPSRMREYAHRIADLVYEELTGERGAFLTRIA 179

Query: 179 FVSESVVSG--IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +V   VV+        L + D DG N R +  S+ Q L  P +SP+ Q +AY ++ +   
Sbjct: 180 YV---VVNDKDPYPYQLRIADYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYVSFQNGQA 235

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             +++M+    +  K + +F     APRFS +GK   + + K   + +Y++DL +   + 
Sbjct: 236 -EIFMMNIYTGQRDK-LTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLKE 293

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T+    N    + PD   ++F SDR GK Q+Y +  +    KR++     +    + +P
Sbjct: 294 VTSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSDGATKRLTWQGSQNLGGQI-TP 352

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +     S   F +  +  +    ++L +    ++P+ +P+G  +I+S   +     
Sbjct: 353 DGKFLVMVNRSDSGFNLAKLDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYNKANVL 412

Query: 417 KLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
            + SID  GR    L  T      P W  F+
Sbjct: 413 SMVSID--GRFKARLPATNGRVRAPAWSPFL 441


>gi|115350731|ref|YP_772570.1| translocation protein TolB [Burkholderia ambifaria AMMD]
 gi|123027500|sp|Q0BHY7|TOLB_BURCM RecName: Full=Protein tolB; Flags: Precursor
 gi|115280719|gb|ABI86236.1| TolB, N-terminal domain protein [Burkholderia ambifaria AMMD]
          Length = 431

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 175/399 (43%), Gaps = 12/399 (3%)

Query: 50  IAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
           IA   F +   L  +V+ +V  DL RS  F  I  D+    +    S+     W + GA 
Sbjct: 42  IATANFANEAGLPQQVTSIVRADLARSGKFTNI--DAGSTPVPETASV-DLGAWKAKGAN 98

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
             V G V +E   + +V F L+D   ++ + G    ++  + R   H I+D IYQ + G 
Sbjct: 99  AFVAGSVNREANGQYKVNFILYDTVKQQSLGGLSLTATDTTLRTAGHKIADYIYQKLLGV 158

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +R+ +V ++      +  L + D DG N R    S + I+  P +SP+  KVAY 
Sbjct: 159 RGVFATRLSYVIKTGN----RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYV 213

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +++ +  + VY+ D    R    + + +    AP +S +     +++       IY+V+ 
Sbjct: 214 SFERKKPI-VYIHDLPTGRR-YMVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNA 271

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                 RLT +  I+    YSPD   I F SDR G  Q+Y M + G       +      
Sbjct: 272 NGGGLRRLTQSSSIDTEPYYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGS 331

Query: 350 FD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           ++  P  SP G L+A+   +G  F + V          +   +  ++P+++ +G+ L+++
Sbjct: 332 YNTSPRISPDGKLLAYISRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYLLYA 391

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            +  G         D +   + L        +P W  FM
Sbjct: 392 TQSGGRNVLAAVPSDGSAPPQILSVQGGSVREPSWGPFM 430


>gi|259909070|ref|YP_002649426.1| translocation protein TolB [Erwinia pyrifoliae Ep1/96]
 gi|224964692|emb|CAX56209.1| Protein TolB (Translocation of group A colicins) [Erwinia
           pyrifoliae Ep1/96]
          Length = 430

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 208/444 (46%), Gaps = 30/444 (6%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVA-TNSANYS-PVSIAFTKFVSIDELGGKVSEVVSK 71
           ++ L +L++ +        HA V++  T   N + P+ +   K+         +  +V+ 
Sbjct: 6   RVALSVLMLFV-----AVAHAEVRIEITQGVNTARPIGVVPFKWDGPGAAPEDIGGIVAA 60

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+ S  FN I +    Q+   P S+   Q   W +LG   ++ G+V         V ++
Sbjct: 61  DLRNSGKFNPIDRARLPQQ---PTSVAEVQPAAWTALGIDAVIVGQVQPGADGSYTVSYQ 117

Query: 130 LWDVK-DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           L D   +   ++ +  F     W R  AHT SD+ ++ +T  KG F +RI +V ++   G
Sbjct: 118 LVDTSGNPGAVLAQNQFKVTKQWLRYAAHTASDESFEKLTAIKGAFRTRIAYVVQTN-GG 176

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L V D DG N +++     Q L  P +SP+  KVAY T+  E      ++ T  +
Sbjct: 177 QFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTF--ESGKSALVIQTLAN 233

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+  + +   
Sbjct: 234 GAIRQVASFPRHNGAPSFSPDGSKLAFALSKTGSLNLYVMDVGSGQIRQITDGRYNSTEP 293

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++ PDS  + + SD+ G+ Q+Y +  NG   +RI+ D   +    V S    ++  +  S
Sbjct: 294 TWFPDSQSLAYTSDQAGRPQIYKIGVNGGTAQRITWDGAQNQDADVSSDGKSMVMISTNS 353

Query: 368 GEKFAIGVMKKD---GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           G +    V ++D   G+ ++L   D+ L + P+ +P+G  +I+S  +    GS L  +  
Sbjct: 354 GAQH---VARQDLVTGAVQQL--TDTFLDETPSLAPNGTMVIYSSTQ--GMGSVLQLVST 406

Query: 424 NGR-NETLINTPAYASDPQWVGFM 446
           +GR    L  T      P W  ++
Sbjct: 407 DGRFKARLPATDGQVKFPAWSPYL 430


>gi|238785869|ref|ZP_04629837.1| hypothetical protein yberc0001_38250 [Yersinia bercovieri ATCC
           43970]
 gi|238713239|gb|EEQ05283.1| hypothetical protein yberc0001_38250 [Yersinia bercovieri ATCC
           43970]
          Length = 430

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 185/403 (45%), Gaps = 20/403 (4%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K++       ++  +V  DL+ S  FN I      Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEEIGAIVGADLRNSGKFNPIDAARMPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           + +    +     W +LG   +V G+V         V ++L D       ++ +  +   
Sbjct: 79  QPSTAAEVTP-AAWTALGIDAVVVGQVQPSADGSYVVSYQLVDTSGAAGSVLAQNQYKVT 137

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R  AHT SD++++ +TG KG F +RI +V ++   G   + L V D DG N +++ 
Sbjct: 138 KQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGKFPHELRVSDYDGYN-QFVV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               + L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS 
Sbjct: 196 HRSPEPLMSPAWSPDGSKIAYVTF--ESGKSALVIQTLANGAIRQVASFPRHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   S+ PDS  + + SD+ G+ Q
Sbjct: 254 DGTKLAFALSKSGSLNLYVMDLASGQISQVTDGRSNNTEPSWFPDSQNLAYTSDQGGRPQ 313

Query: 328 LYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +Y +  NG   +RI    SQ++ A       SP G  +     +G    I          
Sbjct: 314 VYKVNINGGAPQRITWEGSQNQNADV-----SPDGKFLVLVSSNGGAQHIAKQDLVTGAV 368

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           ++L +    + P+ +P+G  +I+S  +    G+ L  +  +GR
Sbjct: 369 QVLTDTFLDETPSIAPNGTMVIYSSTQ--GLGAVLQLVSTDGR 409


>gi|167855025|ref|ZP_02477799.1| Dna-J like membrane chaperone protein [Haemophilus parasuis 29755]
 gi|167853873|gb|EDS25113.1| Dna-J like membrane chaperone protein [Haemophilus parasuis 29755]
          Length = 428

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 193/425 (45%), Gaps = 50/425 (11%)

Query: 17  LCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           L  +L ++G FF   + A   V+++ +        IA   F ++  +   V+++++ DL+
Sbjct: 7   LTSILGIVGLFFSVGVKAESDVRISIDQGVSMAQPIAVIPFKAMGGVPDDVAQIIADDLR 66

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV- 133
            S  F  + + S   + ++   +   + W ++G   +V G+V   G     + ++L D  
Sbjct: 67  NSGKFTPLDRASLPAQPSSAAEV-NPEQWTNIGIDNVVVGQVSAVGGG-YNIAYQLVDTL 124

Query: 134 ---KDRKQIIGKKFFSSPASWRKI-AHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
                   +I +  F+ PA+  ++ AHT+SD +++ +T  +G F ++I +V   V  G+ 
Sbjct: 125 GTSGAAGNVIAQGSFNVPAAQMRLGAHTVSDQVFEKLTQIRGAFRTKIAYV---VQRGVS 181

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L V D DG N   +  S++  L  P +SP+  K+AY T++++   +V + D R   A
Sbjct: 182 SYELRVSDYDGFNAFTIVKSKEP-LMSPEWSPDGSKLAYVTFENKK-SQVVVHDIR-SGA 238

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K IG+ R    AP FS +G R   +  +D  ++IY   +   +  +LT+    N   S+
Sbjct: 239 RKVIGSLRGHNGAPSFSPDGSRVAFASNQDGVLNIYVTGVGGGSPRQLTSNAGNNTEPSW 298

Query: 310 SPDSSQIVFESDREGKEQLYVMQS--------NGSDQKRISQDKE--------------- 346
           SPD   I+F SDR G  Q+Y M S         GS   +IS D +               
Sbjct: 299 SPDGGYILFTSDRGGLPQVYQMSSSGGGASLIGGSGSGKISADGKNLIMVSGDRIVRRDL 358

Query: 347 ---------ASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQA 394
                    +++ D  P  SP G ++ ++   G    + ++  DG  +  L       + 
Sbjct: 359 VSGSTEAISSTFLDESPSISPNGTMVIYSSTKGVSKVLQLVSADGRFKANLPGAGGQYKF 418

Query: 395 PTWSP 399
           P WSP
Sbjct: 419 PAWSP 423


>gi|206561547|ref|YP_002232312.1| translocation protein TolB [Burkholderia cenocepacia J2315]
 gi|226705869|sp|B4EDC0|TOLB_BURCJ RecName: Full=Protein tolB; Flags: Precursor
 gi|198037589|emb|CAR53527.1| putative periplasmic TolB protein [Burkholderia cenocepacia J2315]
          Length = 431

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 106/442 (23%), Positives = 190/442 (42%), Gaps = 16/442 (3%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G    ++ +A V V       +   IA   F +   L  +V+
Sbjct: 3   LMTKLGFRALVASCLITAG----SAANAQVNVLITGVGSTQFPIATANFTNEANLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I  D+    +    S+     W + GA   V G V +E   + +V
Sbjct: 59  SIVRADLARSGKFTNI--DAGSTPVPETASV-DLGAWKAKGANAFVAGSVNREANGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++   
Sbjct: 116 NFILYDTVKQQSLGGLSLTATDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +     +++       IY+V+       RLT +  I+  
Sbjct: 230 GRR-YMVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNANGGGLRRLTQSSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFT 364
             YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+ 
Sbjct: 289 PFYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYI 348

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +G  F + V          +   +  ++P+++ +G+ L+++ +  G         D +
Sbjct: 349 SRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYLLYATQSGGRNVLAAVPSDGS 408

Query: 425 GRNETLINTPAYASDPQWVGFM 446
              + L        +P W  FM
Sbjct: 409 APPQILSVQGGSVREPSWGPFM 430


>gi|123443146|ref|YP_001007120.1| translocation protein TolB [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332160929|ref|YP_004297506.1| translocation protein TolB [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|166229994|sp|A1JRK8|TOLB_YERE8 RecName: Full=Protein tolB; Flags: Precursor
 gi|122090107|emb|CAL12970.1| TolB colicin import protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318604836|emb|CBY26334.1| tolb protein precursor, periplasmic protein involved in the
           TonB-independent uptake of group A colicins [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325665159|gb|ADZ41803.1| translocation protein TolB [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330864065|emb|CBX74142.1| protein tolB [Yersinia enterocolitica W22703]
          Length = 430

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 185/403 (45%), Gaps = 20/403 (4%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K++       ++  +V  DL+ S  FN I      Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEEIGAIVGADLRNSGKFNPIDAARMPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           + +    +     W +LG   +V G+V         V ++L D       ++ +  +   
Sbjct: 79  QPSTAAEVTP-AAWTALGIDAVVVGQVQPSADGSYVVSYQLVDTSGAAGSVLAQNQYKVT 137

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R  AHT SD++++ +TG KG F +RI +V ++   G   + L V D DG N +++ 
Sbjct: 138 KQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGKFPHELRVSDYDGYN-QFVV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               + L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS 
Sbjct: 196 HRSPEPLMSPAWSPDGSKIAYVTF--ESGKSALVIQTLANGAIRQVASFPRHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   S+ PDS  + + SD+ G+ Q
Sbjct: 254 DGTKLAFALSKSGSLNLYVMDLGSGQISQVTDGRSNNTEPSWFPDSQNLAYTSDQGGRPQ 313

Query: 328 LYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +Y +  NG   +RI    SQ++ A       SP G  +     +G    I          
Sbjct: 314 VYKVNINGGAPQRITWEGSQNQNADV-----SPDGKFLVLVSSNGGAQHIAKQDLVTGAV 368

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           ++L +    + P+ +P+G  +I+S  +    G+ L  +  +GR
Sbjct: 369 QVLTDTFLDETPSIAPNGTMVIYSSTQ--GLGAVLQLVSTDGR 409


>gi|283479096|emb|CAY75012.1| Protein tolB precursor [Erwinia pyrifoliae DSM 12163]
          Length = 439

 Score =  124 bits (311), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 208/444 (46%), Gaps = 30/444 (6%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVA-TNSANYS-PVSIAFTKFVSIDELGGKVSEVVSK 71
           ++ L +L++ +        HA V++  T   N + P+ +   K+         +  +V+ 
Sbjct: 15  RVALSVLMLFV-----AVAHAEVRIEITQGVNTARPIGVVPFKWDGPGAAPEDIGGIVAA 69

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+ S  FN I +    Q+   P S+   Q   W +LG   ++ G+V         V ++
Sbjct: 70  DLRNSGKFNPIDRARLPQQ---PTSVAEVQPAAWTALGIDAVIVGQVQPGADGSYTVSYQ 126

Query: 130 LWDVK-DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           L D   +   ++ +  F     W R  AHT SD+ ++ +T  KG F +RI +V ++   G
Sbjct: 127 LVDTSGNPGAVLAQNQFKVTKQWLRYAAHTASDESFEKLTAIKGAFRTRIAYVVQTN-GG 185

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L V D DG N +++     Q L  P +SP+  KVAY T+  E      ++ T  +
Sbjct: 186 QFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTF--ESGKSALVIQTLAN 242

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+  + +   
Sbjct: 243 GAIRQVASFPRHNGAPSFSPDGSKLAFALSKTGSLNLYVMDVGSGQIRQITDGRYNSTEP 302

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++ PDS  + + SD+ G+ Q+Y +  NG   +RI+ D   +    V S    ++  +  S
Sbjct: 303 TWFPDSQSLAYTSDQAGRPQIYKIGVNGGTAQRITWDGAQNQDADVSSDGKSMVMISTNS 362

Query: 368 GEKFAIGVMKKD---GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           G +    V ++D   G+ ++L   D+ L + P+ +P+G  +I+S  +    GS L  +  
Sbjct: 363 GAQH---VARQDLVTGAVQQL--TDTFLDETPSLAPNGTMVIYSSTQ--GMGSVLQLVST 415

Query: 424 NGR-NETLINTPAYASDPQWVGFM 446
           +GR    L  T      P W  ++
Sbjct: 416 DGRFKARLPATDGQVKFPAWSPYL 439


>gi|110804634|ref|YP_688154.1| translocation protein TolB [Shigella flexneri 5 str. 8401]
 gi|123147175|sp|Q0T6X7|TOLB_SHIF8 RecName: Full=Protein tolB; Flags: Precursor
 gi|110614182|gb|ABF02849.1| translocation protein TolB precursor [Shigella flexneri 5 str.
           8401]
          Length = 430

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 186/421 (44%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 19  LHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRA 74

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 75  RLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 131

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 132 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 190

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 191 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 247

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD
Sbjct: 248 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 307

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
             G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 308 LAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 367

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 368 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 427

Query: 399 P 399
           P
Sbjct: 428 P 428


>gi|260779148|ref|ZP_05888040.1| TolB protein precursor [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605312|gb|EEX31607.1| TolB protein precursor [Vibrio coralliilyticus ATCC BAA-450]
          Length = 450

 Score =  124 bits (310), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 119/461 (25%), Positives = 209/461 (45%), Gaps = 51/461 (11%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           CLL V+    F  +  A   V T+  + + P++I   K+    +L   VS V++ DLQRS
Sbjct: 9   CLLTVMSA--FQVANAALELVITDGIDSARPIAIVPFKWEGSTKLPHNVSAVIASDLQRS 66

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV--- 133
             F+ ++     Q   +   I  F  W  LG   L+TG + +  +    + ++L DV   
Sbjct: 67  GKFSPVATSKMPQTPYSESEI-NFDAWTGLGVDALLTGTISQNAEGNYVINYQLVDVVRG 125

Query: 134 -----------KDRKQIIGKK--FFSSPAS-----WRKIAHTISDDIYQSITGEKGDFNS 175
                       D + ++ K    F+  A+      R+ AH ISD +Y+ +TGE+G F +
Sbjct: 126 QLTQGQSKALSTDGQLVLSKDHVLFNKRATVPGERMREYAHRISDLVYKELTGERGAFLT 185

Query: 176 RILFVSESVVSGIIKNS----LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           RI +V   VV+   K+S    L V D DG N R +  S+ Q L  P +SP+ +K+AY ++
Sbjct: 186 RIAYV---VVND--KDSYPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGKKLAYVSF 239

Query: 232 DDED----ILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +      I+ +Y  +  ++   P+  G       APRFS +G +  + + K  ++ +Y+
Sbjct: 240 QNGQAEIFIMNIYTGEREKVTSYPRHNG-------APRFSPDGNKLALVLSKTGSLQVYT 292

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +DL++    ++T     N    + PD   ++F SDR GK Q+Y +        R++    
Sbjct: 293 LDLKTRKLTQITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVDLASGSTNRLTWQGR 352

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +    + +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+
Sbjct: 353 QNLGGQI-TPDGRFLVMVNRSNSGFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGMVIY 411

Query: 407 SRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           S   +      + SID  GR    L  T      P W  F+
Sbjct: 412 SSIFNKTNVLSMVSID--GRFKARLPATNGRVRAPAWSPFL 450


>gi|189346278|ref|YP_001942807.1| Tol-Pal system beta propeller repeat protein TolB [Chlorobium
           limicola DSM 245]
 gi|189340425|gb|ACD89828.1| Tol-Pal system beta propeller repeat protein TolB [Chlorobium
           limicola DSM 245]
          Length = 444

 Score =  124 bits (310), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 182/381 (47%), Gaps = 21/381 (5%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIP-RFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           VV + L  SD+F+++   S  +  +    +   F   +S+GA+V   G V ++   ++ +
Sbjct: 75  VVKEGLIFSDLFSVLPPPSNVRTGSEGKGLAVNFGALSSVGAEVYAGGTVSRK-SGKVNL 133

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  ++D    K ++ K +  S    R + H    D+ + +TG+K  F S+I+FVS    S
Sbjct: 134 DMEVYDTFGTKLLMKKTYTGSEDQLRAMGHAFCADLIELLTGKKSYFGSKIVFVSNKTGS 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILRVYLMDTR 245
             I    C  D DG  I+ LT  R  I   P FSP+  ++AY +Y   +  L +  M   
Sbjct: 194 KEIYQ--C--DFDGQGIQQLTNFRS-ISLTPVFSPDGTRLAYTSYTSGKPTLYIRSMS-- 246

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            D +   +G    + + P +  NG     ++  +   +IY +      + RLTN+  I++
Sbjct: 247 -DNSIAAVGK-NGVSVDPGWR-NGSEVATTLSFEGDQEIYLIRSDGGISRRLTNSRGIDV 303

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++SPD  Q+ F S R G  Q++V        +R++     +   P WSP GD IA++ 
Sbjct: 304 SPTFSPDGKQMAFVSSRNGMPQIFVQDVQSGQTRRLTYSGRYNT-QPSWSPSGDKIAYST 362

Query: 366 F--SGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +  SGE   I V+  DGS  +RL       ++P+WSP G  ++F+  + G  G KLY + 
Sbjct: 363 WEKSGE-INIFVINADGSGVKRLTSGVRENESPSWSPDGSMIVFTSNRQG--GKKLYVMS 419

Query: 423 LNGRNE-TLINTPAYASDPQW 442
             G ++  L+        P W
Sbjct: 420 STGGSQRRLLQMDGEQMQPSW 440



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 86/158 (54%), Gaps = 5/158 (3%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG   R LT SR  I   P FSP+ +++A+ +  +  + ++++ D +  +  +R+     
Sbjct: 288 DGGISRRLTNSRG-IDVSPTFSPDGKQMAFVSSRN-GMPQIFVQDVQSGQT-RRLTYSGR 344

Query: 259 MILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               P +S +G +   S  +K   ++I+ ++   +  +RLT+ +  N S S+SPD S IV
Sbjct: 345 YNTQPSWSPSGDKIAYSTWEKSGEINIFVINADGSGVKRLTSGVRENESPSWSPDGSMIV 404

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           F S+R+G ++LYVM S G  Q+R+ Q  +     P WS
Sbjct: 405 FTSNRQGGKKLYVMSSTGGSQRRLLQ-MDGEQMQPSWS 441


>gi|307249519|ref|ZP_07531506.1| hypothetical protein appser4_3300 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858374|gb|EFM90443.1| hypothetical protein appser4_3300 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 426

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 187/404 (46%), Gaps = 28/404 (6%)

Query: 50  IAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
           IA   F +   +   V ++++ DL+ S  F  + +     +  +   +   Q W  +G  
Sbjct: 42  IAVVPFKTNGGVPADVGQIIADDLRNSGKFTPVERSKLPAQPGSAAEV-NSQQWTDIGVD 100

Query: 110 VLVTGRVIKEGKDRLRVEFRLWD-VKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSIT 167
            +V G+V   G     V ++L D + +   ++ +  F+ PA+  R+ AHT+SD +++ IT
Sbjct: 101 SVVVGQVTPTGGG-YNVAYQLVDTLSNPATVLAQGAFNVPAAQIRQGAHTVSDQVFEKIT 159

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +G F ++I +V   V  G+    L V D DG N   +  S++  L  P +SP+  ++A
Sbjct: 160 QIRGAFRTKIAYV---VQRGVSSYELRVSDYDGYNAFTVVKSKEP-LMSPEWSPDGSRLA 215

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y T++++   +V + D R   + + +   R    AP FS +G R   +  +D  +DIY V
Sbjct: 216 YVTFENKK-AQVVVHDLR-SGSRRVVAALRGHNGAPAFSPDGSRIAFASNQDGELDIYVV 273

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                   +LT     N   S+SPD S I F SDR G  Q+Y M S+G     +      
Sbjct: 274 GANGGKPSKLTANAGNNTEPSWSPDGSTIYFTSDRAGSPQVYRMGSSGGGASPMG--GSG 331

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
           SY   V S   +LI     +G+K    V+K+D +     V  S    ++P+ SP+G  +I
Sbjct: 332 SYNAKVSSDGKNLI---MIAGDK----VVKRDLASGGTEVLSSTFLDESPSISPNGIMVI 384

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFM 446
           +S  K   T   L  +  +GR +   N P        P W  ++
Sbjct: 385 YSSTK--GTSKVLQLVSADGRFKA--NLPGAGGQFKFPAWSPYL 424


>gi|293397222|ref|ZP_06641495.1| tol-Pal system beta propeller repeat protein TolB [Serratia
           odorifera DSM 4582]
 gi|291420242|gb|EFE93498.1| tol-Pal system beta propeller repeat protein TolB [Serratia
           odorifera DSM 4582]
          Length = 430

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 190/401 (47%), Gaps = 16/401 (3%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         V ++V+ DL+ S  FN I      Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFKWAGPGTPPEDVGKIVAADLRNSGKFNPIDAARMPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           + T    +     W +LG   +V G+V         V ++L D       ++ +  +   
Sbjct: 79  QPTTASEVTP-AAWTALGIDAVVVGQVQPGADGGYLVSYQLVDTSGSPGTVLAQNQYKVT 137

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R  AHT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++ 
Sbjct: 138 KQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGKFPYELRVADYDGYN-QFVV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P +SP+  K+AY T+  E      ++ T  + A ++I +F     AP FS 
Sbjct: 196 HRSPQPLMSPTWSPDGSKLAYVTF--ESGRSALVVQTLSNGAIRQIASFPRHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G R   ++ K  ++++Y ++L S    +LT+    N   ++ PD   + F SD+ G+ Q
Sbjct: 254 DGSRLAFALSKSGSLNLYVMNLGSGQITQLTDGRSNNTEPTWFPDGQSLAFTSDQGGRPQ 313

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLL 386
           +Y + ++G   +R++ +   +    V +    L+  T  +G +    + K+D GS    +
Sbjct: 314 IYKISASGGAAQRLTWEGGQNQDSEVSADGKFLVMVTTNNGVQH---IAKQDLGSGAVQV 370

Query: 387 VEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           + D+ L + P+ +P+G  +I+S  +    GS L  +  +GR
Sbjct: 371 LTDTFLDETPSIAPNGTMVIYSSTQ--GMGSVLQLVSTDGR 409


>gi|46143830|ref|ZP_00133958.2| COG0823: Periplasmic component of the Tol biopolymer transport
           system [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|126207787|ref|YP_001053012.1| translocation protein TolB precursor [Actinobacillus
           pleuropneumoniae L20]
 gi|303249537|ref|ZP_07335744.1| colicin tolerance protein [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|303252545|ref|ZP_07338708.1| colicin tolerance protein [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|307245116|ref|ZP_07527209.1| hypothetical protein appser1_3260 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307247295|ref|ZP_07529343.1| hypothetical protein appser2_2920 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307251836|ref|ZP_07533737.1| hypothetical protein appser6_3560 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307254072|ref|ZP_07535919.1| hypothetical protein appser9_3270 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307256331|ref|ZP_07538114.1| hypothetical protein appser10_3380 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307258527|ref|ZP_07540264.1| hypothetical protein appser11_3280 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307260770|ref|ZP_07542457.1| hypothetical protein appser12_3420 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|166229973|sp|A3MZ21|TOLB_ACTP2 RecName: Full=Protein tolB; Flags: Precursor
 gi|126096579|gb|ABN73407.1| translocation protein TolB precursor [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|302648513|gb|EFL78706.1| colicin tolerance protein [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|302651611|gb|EFL81760.1| colicin tolerance protein [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306854005|gb|EFM86217.1| hypothetical protein appser1_3260 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306856139|gb|EFM88294.1| hypothetical protein appser2_2920 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306860528|gb|EFM92540.1| hypothetical protein appser6_3560 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306862997|gb|EFM94944.1| hypothetical protein appser9_3270 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306865157|gb|EFM97057.1| hypothetical protein appser10_3380 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306867431|gb|EFM99282.1| hypothetical protein appser11_3280 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306869496|gb|EFN01286.1| hypothetical protein appser12_3420 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 426

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 187/404 (46%), Gaps = 28/404 (6%)

Query: 50  IAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
           IA   F +   +   V ++++ DL+ S  F  + +     +  +   +   Q W  +G  
Sbjct: 42  IAVVPFKANGGVPADVGQIIADDLRNSGKFTPVERSKLPAQPGSAAEV-NSQQWTDIGVD 100

Query: 110 VLVTGRVIKEGKDRLRVEFRLWD-VKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSIT 167
            +V G+V   G     V ++L D + +   ++ +  F+ PA+  R+ AHT+SD +++ IT
Sbjct: 101 SVVVGQVTPTGGG-YNVAYQLVDTLSNPATVLAQGAFNVPAAQIRQGAHTVSDQVFEKIT 159

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +G F ++I +V   V  G+    L V D DG N   +  S++  L  P +SP+  ++A
Sbjct: 160 QIRGAFRTKIAYV---VQRGVSSYELRVSDYDGYNAFTVVKSKEP-LMSPEWSPDGSRLA 215

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y T++++   +V + D R   + + +   R    AP FS +G R   +  +D  +DIY V
Sbjct: 216 YVTFENKK-AQVVVHDLR-SGSRRVVAALRGHNGAPAFSPDGSRIAFASNQDGELDIYVV 273

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                   +LT     N   S+SPD S I F SDR G  Q+Y M S+G     +      
Sbjct: 274 GANGGKPSKLTANAGNNTEPSWSPDGSTIYFTSDRAGSPQVYRMGSSGGGASPMG--GSG 331

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
           SY   V S   +LI     +G+K    V+K+D +     V  S    ++P+ SP+G  +I
Sbjct: 332 SYNAKVSSDGKNLI---MIAGDK----VVKRDLASGGTEVLSSTFLDESPSISPNGIMVI 384

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFM 446
           +S  K   T   L  +  +GR +   N P        P W  ++
Sbjct: 385 YSSTK--GTSKVLQLVSADGRFKA--NLPGAGGQFKFPAWSPYL 424


>gi|78065363|ref|YP_368132.1| translocation protein TolB [Burkholderia sp. 383]
 gi|119371038|sp|Q39J78|TOLB_BURS3 RecName: Full=Protein tolB; Flags: Precursor
 gi|77966108|gb|ABB07488.1| Periplasmic component of the Tol biopolymer transport system
           [Burkholderia sp. 383]
          Length = 431

 Score =  123 bits (309), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 189/439 (43%), Gaps = 16/439 (3%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           +L  +  +   L+  G    ++ +A V V       +   IA   F +   L  +V+ +V
Sbjct: 6   KLGFRALVASCLITAG----SAANAQVNVLITGVGSTQFPIATANFANEANLPQQVTSIV 61

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
             DL RS  F  I  D+    +    S+     W + GA   V G V +E   + +V F 
Sbjct: 62  RADLARSGKFTNI--DAGSTPVPESASV-DLGAWKAKGANAFVAGSVNREANGQYKVNFI 118

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++      
Sbjct: 119 LYDTVKQQSLGGLSLTATDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN---- 174

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D    R 
Sbjct: 175 RYQLQISDSDGQNARIALSSTEPII-SPSWSPSGTKVAYVSFERKKPI-VYIHDLPTGRR 232

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              + + +    AP +S +     +++       IY+V+       RLT +  I+    Y
Sbjct: 233 -YIVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNSTGGGLRRLTQSSSIDTEPFY 291

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS 367
           SPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+   +
Sbjct: 292 SPDGHWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRISPDGKLLAYISRT 351

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G  F + V          +   +  ++P+++ +G+ L+++ +  G         D +   
Sbjct: 352 GGGFKLYVQDLQSGAANAITNTNRDESPSFAANGQYLLYATQSGGRNVLAAVPSDGSAPP 411

Query: 428 ETLINTPAYASDPQWVGFM 446
           + L        +P W  FM
Sbjct: 412 QILSVQGGSVREPSWGPFM 430


>gi|312796780|ref|YP_004029702.1| TolB protein [Burkholderia rhizoxinica HKI 454]
 gi|312168555|emb|CBW75558.1| TolB protein [Burkholderia rhizoxinica HKI 454]
          Length = 430

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 201/442 (45%), Gaps = 21/442 (4%)

Query: 9   EELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           ++L +K  +  LLV  G     S  A + V       +   IA   F +      +++ +
Sbjct: 5   KKLGLKTLVASLLVTAG----VSARADLTVLVTGVGSTQFPIAVASFTNEASSPQQIAAI 60

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V  +L RS  F+ I  D+    ++  DS+     W + GA   V G V +    +  V F
Sbjct: 61  VRANLARSGKFSNI--DAGSAPVSESDSV-DLGGWKAKGANAFVGGSVTRLANGQYEVRF 117

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RL+D   ++ + G    S  +  R  AH  +D IYQ + G +G F +R+ +V+       
Sbjct: 118 RLYDTIKQQSLGGLSLVSPESGLRMSAHKAADYIYQKLLGSRGMFATRLSYVTRHGG--- 174

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  L + D DG N  ++  +  + +  P +SP+  K+AY +++ +  + VY+ D    R
Sbjct: 175 -RYQLKISDSDGQN-EHIALTSPEPIISPTWSPDGTKLAYVSFERKKPI-VYIHDLPTGR 231

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
               + + +    AP +S +G +  +++       I+ V+   +   RLT    I+   +
Sbjct: 232 R-VMVSDQKGNNSAPAWSPDGTKLAVALSLTGNTQIFIVNADGSGLRRLTRGHSIDTEPA 290

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +SPD   I F SDR G+ Q+Y M + G   S  +R++ +   +    V SP G  +A+  
Sbjct: 291 FSPDGQSIYFTSDRGGQPQIYKMPAQGESASAAQRVTFNGSYNTSARV-SPDGKELAYIS 349

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             G  F + +          L + +  ++P+++ +G+ L+++ + +G     L ++  +G
Sbjct: 350 RVGGAFRLYLQDLSTGSATALTDTTRDESPSFAANGQYLLYATQVNGR--QVLAAVSTDG 407

Query: 426 RNETLINTPAYA-SDPQWVGFM 446
               +++ P     +P W  FM
Sbjct: 408 SIRQVLSIPGGGVREPSWGPFM 429


>gi|315634713|ref|ZP_07889997.1| tol-Pal system beta propeller repeat protein TolB [Aggregatibacter
           segnis ATCC 33393]
 gi|315476661|gb|EFU67409.1| tol-Pal system beta propeller repeat protein TolB [Aggregatibacter
           segnis ATCC 33393]
          Length = 426

 Score =  123 bits (309), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 178/391 (45%), Gaps = 44/391 (11%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P+++   K+         ++++++ DL+ S  FN +S     Q+ T    +     W++L
Sbjct: 38  PIAVVPFKWNGPGSAPADIADIIASDLRNSGKFNPLSVSKMPQQPTTAAEV-NPSAWSAL 96

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWD-VKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQ 164
           G + ++ G+V         + ++L D +     I+ +  ++    W R  AHT+SD+ ++
Sbjct: 97  GIEAVIVGQVTPS-NGGFDIAYQLVDTMGSAGSILSQNQYTVTQKWVRYGAHTVSDETFE 155

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +TG +G F +RI +V +    G     + V D DG N +++     Q    P +SP+ +
Sbjct: 156 KLTGIRGAFRTRIAYVVQKN-GGSQPYEVRVADYDGFN-QFIINKSSQPFMSPAWSPDGK 213

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           K+AY +++++   ++ L D     A K I +F     AP FS +G R   +  KD  ++I
Sbjct: 214 KLAYVSFENKK-AQIILQDLS-SMARKVIASFPGHNGAPAFSPDGSRLAFASSKDGVLNI 271

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK----- 339
           Y ++L S    +LT+    N   S+SPD   IVF SDR G  Q+Y M ++G         
Sbjct: 272 YVINLGSGQVSQLTSGSGNNTEPSWSPDGQSIVFTSDRGGSPQVYRMSASGGGASLVGGR 331

Query: 340 ---RISQDK-------------------------EASYFD--PVWSPQGDLIAFTKFSGE 369
              +IS D                           +++ D  P  SP G +I ++   G 
Sbjct: 332 GSGQISSDGSTLVMIDGSNNIVKQDLVSGGSEVLSSTFLDESPSISPNGIMIIYSSTQGL 391

Query: 370 KFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
              + ++  DG  + RL   D  ++ P WSP
Sbjct: 392 GKVLQLVSTDGRFKARLPGNDGQVKFPAWSP 422


>gi|238797730|ref|ZP_04641224.1| hypothetical protein ymoll0001_12380 [Yersinia mollaretii ATCC
           43969]
 gi|238718371|gb|EEQ10193.1| hypothetical protein ymoll0001_12380 [Yersinia mollaretii ATCC
           43969]
          Length = 386

 Score =  123 bits (308), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 172/369 (46%), Gaps = 18/369 (4%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           ++  +V  DL+ S  FN I      Q+ +    +     W +LG   +V G+V       
Sbjct: 9   EIGAIVGADLRNSGKFNPIDAARMPQQPSTAAEV-TPAAWTALGIDAVVVGQVQPSADGS 67

Query: 124 LRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             V ++L D       ++ +  +     W R  AHT SD++++ +TG KG F +RI +V 
Sbjct: 68  YVVSYQLVDTSGAAGSVLAQNQYKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVV 127

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++   G   + L V D DG N +++     Q L  P +SP+  K+AY T+  E      +
Sbjct: 128 QTN-GGKFPHELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKIAYVTF--ESGKSALV 183

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           + T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+  
Sbjct: 184 IQTLANGAIRQVASFPRHNGAPAFSPDGTKLAFALSKSGSLNLYVMDLGSGQISQVTDGR 243

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQ 357
             N   S+ PDS  + + SD+ G+ Q+Y +  NG   +RI    SQ++ A       SP 
Sbjct: 244 SNNTEPSWFPDSQNLAYTSDQGGRPQVYKVNINGGAPQRITWEGSQNQNADV-----SPD 298

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  +     +G    I          ++L +    + P+ +P+G  +I+S  +    G+ 
Sbjct: 299 GKFLVLVSSNGGAQHIAKQDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSTQ--GLGAV 356

Query: 418 LYSIDLNGR 426
           L  +  +GR
Sbjct: 357 LQLVSTDGR 365


>gi|87118952|ref|ZP_01074850.1| tolB protein [Marinomonas sp. MED121]
 gi|86165343|gb|EAQ66610.1| tolB protein [Marinomonas sp. MED121]
          Length = 421

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/388 (23%), Positives = 188/388 (48%), Gaps = 6/388 (1%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           +++ + +    P+++    +   D L   V++++  DL+RS +F  I + +     +  +
Sbjct: 15  IEITSGADQLLPLAVVPFAYEGRDGLPEDVAQIIENDLKRSGLFEAIPRTNMLSLPSKKE 74

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKI 154
            +  F+DW  L +  +V G V +   +   + F L +V  +K +      +   S  R  
Sbjct: 75  DV-HFRDWRLLKSDYVVIGDVKQIDANNFEINFELINVLSQKTVEKHTGLAVKVSGLRDA 133

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH ISD IY+ +TG +G F++RIL+V+           L V D DG   + +  S++ IL
Sbjct: 134 AHYISDKIYRLLTGVRGAFSTRILYVTAEGNRAEPTYRLQVADADGHRPQVIVESKEPIL 193

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +S N + + Y  + D     +++ +    +  ++I  +R +  AP +S +GK+  +
Sbjct: 194 -SPSWSRNGRFITYVMFRDRRP-NIFVQELATGKR-QKIAQYRGLNGAPAWSPDGKQLAL 250

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + KD   +IY +D+ +   +R+TN   I+   S+ PD   IVF SDR G  Q+Y +  +
Sbjct: 251 VLSKDGNPEIYVLDIATQKLQRITNHYSIDTEPSWEPDGKGIVFTSDRGGNPQIYRVDIS 310

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
               +R++ + + +    + +P G  +   + +   + I +      + ++L E    ++
Sbjct: 311 SKAVERVTFEGDLNTRARM-TPDGRYLVTVQKNEGNYHIALQDMKNGRVQILTETYLDES 369

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           P+ +P+G  ++++    G     + S+D
Sbjct: 370 PSIAPNGSMVMYATTYKGKGILAVVSVD 397


>gi|188534420|ref|YP_001908217.1| translocation protein TolB [Erwinia tasmaniensis Et1/99]
 gi|226705882|sp|B2VBQ7|TOLB_ERWT9 RecName: Full=Protein tolB; Flags: Precursor
 gi|188029462|emb|CAO97339.1| Protein TolB (translocation of group A colicins) [Erwinia
           tasmaniensis Et1/99]
          Length = 430

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 213/448 (47%), Gaps = 38/448 (8%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVA-TNSANYS-PVSIAFTKF----VSIDELGGKVSE 67
           ++ L +L++ +        HA V++  T   N + P+ +   K+     + +++GG    
Sbjct: 6   RVALSVLMLFV-----AVAHAEVRIEITQGVNTARPIGVVPFKWDGPGAAPEDIGG---- 56

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLR 125
           +V+ DL+ S  FN I +    Q+   P S+   Q   W +LG   +V G+V         
Sbjct: 57  IVAADLRNSGKFNPIDRARLPQQ---PTSVAEVQPAAWTALGIDAVVVGQVQPGADGSYT 113

Query: 126 VEFRLWDVK-DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           V ++L D   +   ++ +  F     W R  AH+ SD+ ++ +T  KG F +RI +V ++
Sbjct: 114 VSYQLVDTSGNPGAVLAQNQFKVTKQWLRYAAHSASDESFEKLTAIKGAFRTRIAYVVQT 173

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              G     L V D DG N +++     Q L  P +SP+  KVAY T+  E      ++ 
Sbjct: 174 N-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTF--ESGKSALVIQ 229

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T  + A +++ +F     AP FS +G +   ++ K  +++IY +D+ S    ++T+  + 
Sbjct: 230 TLANGAIRQVASFPRHNGAPSFSPDGSKLAFALSKTGSLNIYVMDIGSGQISQITDGRYN 289

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +   ++ PDS  + + SD+ G+ Q+Y +  NG   +RI+ +   +    V S    ++  
Sbjct: 290 STEPTWFPDSQSLAYTSDQAGRPQIYKIGVNGGTAQRITWEGAQNQDADVSSDGKSMVMI 349

Query: 364 TKFSGEKFAIGVMKKD---GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +  SG +    V ++D   G+ ++L   D+ L + P+ +P+G  +I+S  +    GS L 
Sbjct: 350 STNSGAQH---VARQDLVTGAVQKL--TDTFLDETPSLAPNGTMVIYSSTQ--GMGSVLQ 402

Query: 420 SIDLNGR-NETLINTPAYASDPQWVGFM 446
            +  +GR    L  T      P W  ++
Sbjct: 403 LVSTDGRFKARLPATDGQVKFPAWSPYL 430


>gi|325498077|gb|EGC95936.1| translocation protein TolB [Escherichia fergusonii ECD227]
          Length = 431

 Score =  123 bits (308), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 182/417 (43%), Gaps = 56/417 (13%)

Query: 32  IHAFVKVATNSANYS--PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++  +    S  P+ +   K+         +  +VS DL+ S  FN + +    Q
Sbjct: 20  LHAEVRIVIDGGVDSGRPIGVVPFKWAGPGAAPEDIGGIVSDDLRYSGKFNPLDRARLPQ 79

Query: 90  KITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFS 146
           +   P S    Q   W++L    +V G+V         V ++L D       ++ +  F 
Sbjct: 80  Q---PASAQEVQPAAWSALAIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSFK 136

Query: 147 SPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
               W R  AHT+SD++++ +TG KG F +R+ +V ++   G     L V D DG N  +
Sbjct: 137 VNKQWLRYAAHTVSDEVFEKLTGIKGAFRTRLAYVVQTN-GGQFPYELRVSDYDGYN-PF 194

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP F
Sbjct: 195 VVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSELVIQTLANGAIRKVASFPRHNGAPAF 252

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+
Sbjct: 253 SPDGSKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQNLAFTSDQAGR 312

Query: 326 EQLYVMQSNGSDQKRIS------QDKEAS------------------------------- 348
            Q+Y +  NG   +RI+      QD + S                               
Sbjct: 313 PQVYKVNINGGAPQRITWEGTQNQDADVSSDGKFMVMVSSDGGKQHIAKQDLVTGGVQVL 372

Query: 349 ---YFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
              + D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WSP
Sbjct: 373 SSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSP 429


>gi|324114315|gb|EGC08284.1| tol-Pal system beta propeller TolB [Escherichia fergusonii B253]
          Length = 430

 Score =  123 bits (308), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 182/417 (43%), Gaps = 56/417 (13%)

Query: 32  IHAFVKVATNSANYS--PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++  +    S  P+ +   K+         +  +VS DL+ S  FN + +    Q
Sbjct: 19  LHAEVRIVIDGGVDSGRPIGVVPFKWAGPGAAPEDIGGIVSDDLRYSGKFNPLDRARLPQ 78

Query: 90  KITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFS 146
           +   P S    Q   W++L    +V G+V         V ++L D       ++ +  F 
Sbjct: 79  Q---PASAQEVQPAAWSALAIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSFK 135

Query: 147 SPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
               W R  AHT+SD++++ +TG KG F +R+ +V ++   G     L V D DG N  +
Sbjct: 136 VNKQWLRYAAHTVSDEVFEKLTGIKGAFRTRLAYVVQTN-GGQFPYELRVSDYDGYN-PF 193

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP F
Sbjct: 194 VVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSELVIQTLANGAIRKVASFPRHNGAPAF 251

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+
Sbjct: 252 SPDGSKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQNLAFTSDQAGR 311

Query: 326 EQLYVMQSNGSDQKRIS------QDKEAS------------------------------- 348
            Q+Y +  NG   +RI+      QD + S                               
Sbjct: 312 PQVYKVNINGGAPQRITWEGTQNQDADVSSDGKFMVMVSSDGGKQHIAKQDLVTGGVQVL 371

Query: 349 ---YFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
              + D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WSP
Sbjct: 372 SSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSP 428


>gi|78189865|ref|YP_380203.1| TolB protein, putative [Chlorobium chlorochromatii CaD3]
 gi|119371039|sp|Q3APB5|TOLB_CHLCH RecName: Full=Protein tolB; Flags: Precursor
 gi|78172064|gb|ABB29160.1| TolB protein, putative [Chlorobium chlorochromatii CaD3]
          Length = 440

 Score =  122 bits (307), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 175/354 (49%), Gaps = 32/354 (9%)

Query: 100 FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS 159
           F+  +S+G      G +   G + + ++ ++++V   K + GK++  + +  R ++H  S
Sbjct: 103 FKALDSIGGAFYAVGTLSSSGGE-ITLDGQVFEVATGKVLFGKRYRGTESQLRALSHAFS 161

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            D+ + +TG+K  F S+I+F+S    S  I +  C  D DGAN+  LT  R  I   P  
Sbjct: 162 GDVVEFLTGKKSVFGSQIVFISNKSGSKEIYS--C--DFDGANVHQLTNFRS-IALTPAL 216

Query: 220 SPNQQKVAYATY-DDEDILRVYLMDT-RIDRAPKRIGNF------RSMILAPRFSSNGKR 271
           SP+   +A+  +   +  L +  + T +  R  K+ GN        S  LA  FS  G +
Sbjct: 217 SPDGAYLAFTDFTGGKPALAIRELATGKTTRVAKK-GNSIDPAWRNSRELATTFSFEGDQ 275

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                      ++Y +D      +RLT++  I++S ++SPD  ++ F S R G  Q++V 
Sbjct: 276 -----------ELYLLDSAGAVKQRLTSSSGIDLSPTFSPDGRKMAFVSARSGNPQIFVY 324

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQ-ERLLVED 389
             +    +R++     +   P WSP GD IAF+ + SG +  I V+  DGS   +L  + 
Sbjct: 325 DFSSGKSQRLTFSGRYNT-QPAWSPIGDKIAFSTWESGGEINIFVINTDGSGLTQLTTQS 383

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQW 442
              ++P+WSP GR ++F+  + G    KLY +  +G+N+  L+      + P W
Sbjct: 384 GENESPSWSPDGRMIVFASNRQGV--KKLYVMMADGKNQRPLLAIGGEQTQPSW 435


>gi|218549687|ref|YP_002383478.1| translocation protein TolB [Escherichia fergusonii ATCC 35469]
 gi|226705883|sp|B7LKL8|TOLB_ESCF3 RecName: Full=Protein tolB; Flags: Precursor
 gi|218357228|emb|CAQ89863.1| periplasmic protein [Escherichia fergusonii ATCC 35469]
          Length = 430

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 182/417 (43%), Gaps = 56/417 (13%)

Query: 32  IHAFVKVATNSANYS--PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++  +    S  P+ +   K+         +  +VS DL+ S  FN + +    Q
Sbjct: 19  LHAEVRIVIDGGVDSGRPIGVVPFKWAGPGAAPEDIGGIVSDDLRYSGKFNPLDRARLPQ 78

Query: 90  KITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFS 146
           +   P S    Q   W++L    +V G+V         V ++L D       ++ +  F 
Sbjct: 79  Q---PASAQEVQPAAWSALAIDAVVVGQVTPNPDGSYNVTYQLVDTGGAPGTVLAQNSFK 135

Query: 147 SPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
               W R  AHT+SD++++ +TG KG F +R+ +V ++   G     L V D DG N  +
Sbjct: 136 VNKQWLRYAAHTVSDEVFEKLTGIKGAFRTRLAYVVQTN-GGQFPYELRVSDYDGYN-PF 193

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP F
Sbjct: 194 VVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSELVIQTLANGAIRKVASFPRHNGAPAF 251

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+
Sbjct: 252 SPDGSKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQNLAFTSDQAGR 311

Query: 326 EQLYVMQSNGSDQKRIS------QDKEAS------------------------------- 348
            Q+Y +  NG   +RI+      QD + S                               
Sbjct: 312 PQVYKVNINGGAPQRITWEGTQNQDADVSSDGKFMVMVSSDGGKQHIAKQDLVTGGVQVL 371

Query: 349 ---YFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
              + D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WSP
Sbjct: 372 SSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSP 428


>gi|311280380|ref|YP_003942611.1| Tol-Pal system beta propeller repeat protein TolB [Enterobacter
           cloacae SCF1]
 gi|308749575|gb|ADO49327.1| Tol-Pal system beta propeller repeat protein TolB [Enterobacter
           cloacae SCF1]
          Length = 430

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 185/421 (43%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++       S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRS 74

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P +    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 75  RLPQQ---PGTAQEVQPAAWSALGIDAVVVGQVTPNPDGSYTVAYQLVDTGGAPGTVLAQ 131

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 132 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 190

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 191 N-QFVVHRSSQPLMSPAWSPDGAKLAYVTF--ESGRSALVIQTLANGAVRQVASFPQHNG 247

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y ++L S    ++TN    N   ++ PDS  + F SD
Sbjct: 248 APAFSPDGSKLAFALSKTGSLNLYVMNLASGQITQVTNGRSNNTEPNWFPDSQNLAFTSD 307

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 308 QAGRPQVYKVNVNGGAPQRITWEGSQNQDADVSADGKFLVMVSSANGQQHIAKQDLAAGG 367

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 368 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 427

Query: 399 P 399
           P
Sbjct: 428 P 428


>gi|238752127|ref|ZP_04613610.1| hypothetical protein yrohd0001_550 [Yersinia rohdei ATCC 43380]
 gi|238709704|gb|EEQ01939.1| hypothetical protein yrohd0001_550 [Yersinia rohdei ATCC 43380]
          Length = 386

 Score =  122 bits (307), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 174/369 (47%), Gaps = 18/369 (4%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           +V  +V+ DL+ S  FN I      Q+ +    +     W +LG   +V G+V       
Sbjct: 9   EVGAIVAADLRNSGKFNPIDAARMPQQPSTAAEV-TPAAWTALGIDAVVVGQVQPSADGS 67

Query: 124 LRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             V ++L D       ++ +  +     W R  AHT SD++++ +TG KG F +RI +V 
Sbjct: 68  YVVSYQLVDTSGAAGSVLAQNQYKVTKQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYVV 127

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++   G   + L V D DG N +++     + L  P +SP+  K+AY T+  E      +
Sbjct: 128 QTN-GGKFPHELRVSDYDGYN-QFVVHRSPEPLMSPAWSPDGSKIAYVTF--ESGKSALV 183

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           + T  + A +++ +F     AP FS +G +   ++ K  ++++Y ++L S    ++T+  
Sbjct: 184 IQTLANGAIRQVASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMNLASGQISQVTDGR 243

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQ 357
             N   S+ PDS  + + SD+ G+ Q+Y +  NG   +RI    SQ++ A       SP 
Sbjct: 244 SNNTEPSWFPDSQNLAYTSDQGGRPQVYKVNINGGAPQRITWEGSQNQNADV-----SPD 298

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  +     +G    I     +    ++L +    + P+ +P+G  +I+S  +    G+ 
Sbjct: 299 GKFLVLVSSNGGAQHIAKQDLETGAVQVLTDTFLDETPSIAPNGTMVIYSSTQ--GLGAV 356

Query: 418 LYSIDLNGR 426
           L  +  +GR
Sbjct: 357 LQLVSTDGR 365


>gi|291085672|ref|ZP_06353704.2| Tol-Pal system beta propeller repeat protein TolB [Citrobacter
           youngae ATCC 29220]
 gi|291070094|gb|EFE08203.1| Tol-Pal system beta propeller repeat protein TolB [Citrobacter
           youngae ATCC 29220]
          Length = 431

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 182/417 (43%), Gaps = 56/417 (13%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         +  +V  DL+ S  FN + +    Q
Sbjct: 20  LHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVGADLRNSGKFNPLDRSRLPQ 79

Query: 90  KITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFS 146
           +   P +    Q   W++LG   +V G+V         V ++L D       ++ +  + 
Sbjct: 80  Q---PGTAAEVQPAAWSALGIDAVVVGQVTPNPDGSYSVAYQLVDTGGAPGTVLAQNTYK 136

Query: 147 SPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
               W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N ++
Sbjct: 137 VNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QF 194

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP F
Sbjct: 195 VVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNGAPAF 252

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G +   ++ K  ++++Y +D+ S    ++T+    N   ++ PDS  + F SD+ G+
Sbjct: 253 SPDGSKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGR 312

Query: 326 EQLYVMQSNGSDQKRI----SQDKEA---------------------------------- 347
            Q+Y +  NG   +RI    SQ+++A                                  
Sbjct: 313 PQVYKVNVNGGAPQRITWEGSQNQDADVSSDGKFMVMVSSANGQQHIAKQDLVAGGVQVL 372

Query: 348 --SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
             ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WSP
Sbjct: 373 SSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSP 429


>gi|183598188|ref|ZP_02959681.1| hypothetical protein PROSTU_01566 [Providencia stuartii ATCC 25827]
 gi|188020354|gb|EDU58394.1| hypothetical protein PROSTU_01566 [Providencia stuartii ATCC 25827]
          Length = 430

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 180/391 (46%), Gaps = 20/391 (5%)

Query: 39  ATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK-ITNPDSI 97
             NSA   P+ +   K+        ++ ++V  DL+ S  FN I      Q+  T  + +
Sbjct: 30  GVNSAQ--PIGVVPFKWSGSGTPPQEIGQIVGADLRNSGKFNPIEPSRMPQQPATASEVV 87

Query: 98  PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIA 155
           P  + W +LG   +V G++         V ++L DV      ++ +  +     W R  A
Sbjct: 88  P--EAWTALGINAVVVGQIQPAADGSYVVSYQLVDVAGSPGTVLSQNQYKVTKEWLRYAA 145

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           HT SD++++ +TG +G F +RI +V  +   G     L V D DG N ++      + L 
Sbjct: 146 HTASDEVFEKLTGIRGAFRTRIAYVVTNK-GGQYPYELRVSDYDGYN-QFTVHRSPEPLM 203

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +SP+ +++AY T++        ++ T    A +++ +F     AP FS +G +   +
Sbjct: 204 SPTWSPDGERLAYVTFESGS--SALVIQTLSTGAVRQVASFPRHNGAPAFSPDGTKLAFA 261

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + K  ++++Y +DL S    ++T+    N   S+ PDS  +V+ SD+ G+ Q+Y +  NG
Sbjct: 262 LSKTGSLNLYIMDLASGQIRQVTDGRSNNTEPSWMPDSQTLVYTSDQAGRPQIYKINING 321

Query: 336 SDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              +R+    +Q+++A       SP G  I      G +  I            L +   
Sbjct: 322 GSPERVTWEGTQNQDADV-----SPDGSFIVMVSSGGGQQHIAKQDLATGNVEYLTKTFL 376

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            + P+ +P+G  +I+S  +   T  +L S D
Sbjct: 377 DETPSIAPNGTMVIYSSSQGLGTILQLVSTD 407


>gi|242238602|ref|YP_002986783.1| translocation protein TolB [Dickeya dadantii Ech703]
 gi|242130659|gb|ACS84961.1| Tol-Pal system beta propeller repeat protein TolB [Dickeya dadantii
           Ech703]
          Length = 428

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 113/438 (25%), Positives = 198/438 (45%), Gaps = 59/438 (13%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE----V 68
           +KI L  L++     +   +HA V++       S   IA   F S    GG V E    +
Sbjct: 5   LKIALSFLML-----WAAVLHAEVRIEITQGVDSARPIAVVPFKSA---GGAVPEDIGNI 56

Query: 69  VSKDLQRSDVFNLISQDSFKQKI-TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V+ DL+ S  FN I      Q+  T  +  P    W +LG   ++ G+V +   D   + 
Sbjct: 57  VAADLRNSGKFNPIDPSRMPQQPGTAAEVTPA--AWTALGIDAVIVGQV-QPTADGYLIS 113

Query: 128 FRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           ++L D       ++ +  F     W R  AHT SD+++Q +TG KG F +RI +V ++  
Sbjct: 114 YQLVDTSGSAGSVLAQNQFKVTRQWLRYAAHTASDEVFQKLTGIKGAFRTRIAYVVQTN- 172

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G     L V D DG N +++     + L  P +SP+  K+AY T+  E      ++ T 
Sbjct: 173 GGQYPYELRVADYDGYN-QFVVHRSPEPLMSPSWSPDGSKLAYVTF--ESGRSALVIQTL 229

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +   +++ +F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N 
Sbjct: 230 ANGDIRQVASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMNLGSGQISQITDGRSNNT 289

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------QDKEASYFDPVWSPQGD 359
             ++ PDS  + + SD+ G+ Q+Y + +NG   +R++      QD E S           
Sbjct: 290 EPTWFPDSQTLAYTSDQAGRPQIYKIGANGGTPQRLTWEGAQNQDSEVS----------- 338

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQE-----------RLLVEDSNLQAPTWSPSGRSLIFSR 408
                  S  KF + V    G+Q            ++L +    + P+ +P+G  +I+S 
Sbjct: 339 -------SDGKFIVMVSSNSGAQHIAKQDLVTGGVQVLTDTFLDETPSIAPNGTMVIYSS 391

Query: 409 KKDGDTGSKLYSIDLNGR 426
           K+    GS L  +  +GR
Sbjct: 392 KQ--GLGSVLQLVSTDGR 407


>gi|322514836|ref|ZP_08067855.1| tol-Pal system beta propeller repeat protein TolB [Actinobacillus
           ureae ATCC 25976]
 gi|322119218|gb|EFX91359.1| tol-Pal system beta propeller repeat protein TolB [Actinobacillus
           ureae ATCC 25976]
          Length = 426

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 184/405 (45%), Gaps = 30/405 (7%)

Query: 50  IAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF--QDWNSLG 107
           IA   F +   +   V ++++ DL+ S  F  + +     +   P S      Q W  +G
Sbjct: 42  IAVVPFKANGAVPADVGQIIADDLRNSGKFTPVERSRLPAQ---PGSAAEVDSQQWTDIG 98

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWD-VKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQS 165
              +V G+V   G     V ++L D + +   +  +  F+ PA+  R+ AHT+SD +++ 
Sbjct: 99  VDSVVVGQVTPTGSG-YNVAYQLVDTLSNPAAVFAQGSFNVPAAQIRQGAHTVSDQVFEK 157

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           IT   G F ++I +V   V  G+    L V D DG N   +  SR+  L  P +SP+  +
Sbjct: 158 ITQILGAFRTKIAYV---VQRGVSSYELRVSDYDGYNAFTVVKSREP-LMSPEWSPDGSR 213

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           +AY T++++   +V + D R     +RI    R    AP FS +G R   +  +D  +DI
Sbjct: 214 LAYVTFENKK-AQVVVHDLR--SGSRRIVAALRGHNGAPAFSPDGSRIAFASNQDGELDI 270

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           Y V        +LT     N   S+SPD S I F SDR G  Q+Y M S+G     +   
Sbjct: 271 YVVGANGGKPSKLTANAGNNTEPSWSPDGSTIYFTSDRAGSPQVYRMSSSGGGASPMG-- 328

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGR 402
              SY   V S   +LI     +G+K    V+K+D +     V  S    ++P+ SP+G 
Sbjct: 329 GSGSYNAKVSSDGKNLI---MIAGDK----VVKRDLASGGTEVLSSTFLDESPSISPNGI 381

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
            +I+S  K   T   L  +  +GR    L  T      P W  ++
Sbjct: 382 MVIYSSTK--GTSKVLQLVSADGRFKANLPGTGGQFKFPAWSPYL 424


>gi|88705611|ref|ZP_01103321.1| TolB protein precursor [Congregibacter litoralis KT71]
 gi|88700124|gb|EAQ97233.1| TolB protein precursor [Congregibacter litoralis KT71]
          Length = 428

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/400 (24%), Positives = 182/400 (45%), Gaps = 53/400 (13%)

Query: 46  SPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNS 105
           +PV++    +         ++EVV +D +RS  F+ +++       +  + +  ++DW +
Sbjct: 32  TPVAVVPFAWEGAGTAPADMAEVVQEDFERSGQFSPVARADMLGFPSREEEV-FYRDWRA 90

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           + ++ ++ GR   EG D L + + L+DV  + +I            R +AH +SD +Y+ 
Sbjct: 91  IASEYVLIGRARGEG-DGLSLSYELYDVLRQTRIAEGTVTGPVGEARMLAHRVSDAVYEK 149

Query: 166 ITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           +TG  G F +R+++VS +   +G     L + D DGA    L  SR+ I+  P +SP+ +
Sbjct: 150 LTGIPGAFATRLIYVSVTRNPTGKDYYRLTLADSDGARPIVLLESREPIM-SPSWSPDGK 208

Query: 225 KVAYATYDD--EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           +VAY +++     I R  L     ++    + NFR +  +P +S +G    + + KD + 
Sbjct: 209 QVAYVSFETGRPAIFRQVLASGEREQ----LTNFRGLNSSPAWSPDGNSMAMVLSKDGSP 264

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY------------V 330
           DIY +D+ S    R+T    I+   S+ PD    +F SDR G+ Q+Y             
Sbjct: 265 DIYLMDMASRRLTRVTRHYAIDTEPSWMPDGRSFLFTSDRGGRPQIYRYDLRSGLTERVT 324

Query: 331 MQSNGSDQKRISQD---------KEASY---------------------FDPVWSPQGDL 360
            + + + + R++QD         +E  Y                       P  +P G +
Sbjct: 325 FEGSYNARARVAQDGRNVVLVHQREGEYQIAIHDLVTNRLQVLTNTDLDESPSIAPNGSM 384

Query: 361 IAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSP 399
           + +    G++  +  +  DG  + RL     +++ P WSP
Sbjct: 385 VLYATKYGDRGILSAVSVDGGVKFRLPARSGDVREPAWSP 424


>gi|153824250|ref|ZP_01976917.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|126518227|gb|EAZ75452.1| conserved hypothetical protein [Vibrio cholerae B33]
          Length = 374

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 159/319 (49%), Gaps = 30/319 (9%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P++I   K+    +L   VS V++ DLQRS  F+ +      Q   + + +  F  W S+
Sbjct: 14  PIAIVPFKWEGATKLPEDVSAVIASDLQRSGKFSPVPTSKMPQTPYSEEQV-NFGKWTSM 72

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDV--------------KDRKQIIGK------KFFS 146
           G   L+TG + +  +    + ++L D+              +D + ++ K      K  +
Sbjct: 73  GVDSLLTGTITQNAEGSYVISYQLVDIVRGQLTQGQSKALSQDGQLVLSKDHVLFNKVAT 132

Query: 147 SPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG--IIKNSLCVMDRDGANI 203
            PAS  R+ AH I+D +Y+ +TGE+G F +RI +V   VV+        L + D DG N 
Sbjct: 133 VPASRMREYAHRIADLVYEELTGERGAFLTRIAYV---VVNDKDPYPYQLRIADYDGYNE 189

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +  S+ Q L  P +SP+ Q +AY ++ +     +Y+M+    +  +++ +F     AP
Sbjct: 190 RLVLRSK-QPLMSPAWSPDGQTLAYVSFQNGQA-EIYMMNIYSGKR-EKLTSFPRHNGAP 246

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           RFS +GK   + + K   + +Y++DL +     +T+    N    + PD   ++F SDR 
Sbjct: 247 RFSPDGKTLALVLSKTGNLQVYTMDLATRRLTEVTSGRSNNTEPFWHPDGKSLIFTSDRG 306

Query: 324 GKEQLYVMQSNGSDQKRIS 342
           GK Q+Y +  +G + KR++
Sbjct: 307 GKPQIYQVNLSGGETKRLT 325



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +S ++SPD   + + S + G+ ++Y+M   +G  +K  S  +      P +SP G  +A 
Sbjct: 200 MSPAWSPDGQTLAYVSFQNGQAEIYMMNIYSGKREKLTSFPRHNG--APRFSPDGKTLAL 257

Query: 364 TKFSGEKFAIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                    +  M  D +  RL       SN   P W P G+SLIF+  + G    ++Y 
Sbjct: 258 VLSKTGNLQVYTM--DLATRRLTEVTSGRSNNTEPFWHPDGKSLIFTSDRGGK--PQIYQ 313

Query: 421 IDLNG 425
           ++L+G
Sbjct: 314 VNLSG 318


>gi|292487661|ref|YP_003530534.1| protein TolB [Erwinia amylovora CFBP1430]
 gi|292898898|ref|YP_003538267.1| TolB colicin import protein [Erwinia amylovora ATCC 49946]
 gi|291198746|emb|CBJ45855.1| TolB colicin import protein [Erwinia amylovora ATCC 49946]
 gi|291553081|emb|CBA20126.1| Protein tolB precursor [Erwinia amylovora CFBP1430]
          Length = 430

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 208/444 (46%), Gaps = 30/444 (6%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVA-TNSANYS-PVSIAFTKFVSIDELGGKVSEVVSK 71
           ++ L +L++ I        HA V++  T   N + P+ +   K+         +  +V+ 
Sbjct: 6   RVALSVLMLFI-----AVAHAEVRIEITQGVNTARPIGVMPFKWDGPGAAPEDIGAIVAA 60

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+ S  FN I +    Q+   P S+   Q   W +LG   ++ G+V         V ++
Sbjct: 61  DLRNSGKFNPIDRARLPQQ---PTSVAEVQPAAWTALGIDAVIVGQVQPGADGSYAVSYQ 117

Query: 130 LWDV-KDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           L D   +   ++ +  F     W R  AHT SD+ ++ +T  KG F +RI +V ++   G
Sbjct: 118 LVDTSANPGAVLAQNQFKVTKQWLRYAAHTASDESFEKLTAIKGAFRTRIAYVVQTN-GG 176

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L V D DG N +++     Q L  P +SP+  KVAY T+  E      ++ T  +
Sbjct: 177 QFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTF--ESGKSALVIQTLAN 233

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+  + +   
Sbjct: 234 GAIRQVASFPRHNGAPSFSPDGSKLAFALSKTGSLNLYVMDVGSGQIRQITDGRYNSTEP 293

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++ PDS  + + SD+ G+ Q+Y +  NG   +RI+ +   +    V +    ++  +  S
Sbjct: 294 TWFPDSQSLAYTSDQAGRPQIYKIGVNGGTAQRITWEGAQNQDADVSADGKSMVMISTNS 353

Query: 368 GEKFAIGVMKKD---GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           G +    V ++D   G+ ++L   D+ L + P+ +P+G  +I+S  +    GS L  +  
Sbjct: 354 GAQH---VARQDLVTGAVQKL--TDTFLDETPSLAPNGTMVIYSSTQ--GMGSVLQLVST 406

Query: 424 NGR-NETLINTPAYASDPQWVGFM 446
           +GR    L  T      P W  ++
Sbjct: 407 DGRFKARLPATDGQVKFPAWSPYL 430


>gi|82543167|ref|YP_407114.1| translocation protein TolB [Shigella boydii Sb227]
 gi|119371060|sp|Q324H2|TOLB_SHIBS RecName: Full=Protein tolB; Flags: Precursor
 gi|81244578|gb|ABB65286.1| TolB [Shigella boydii Sb227]
          Length = 430

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 185/421 (43%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 19  LHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRA 74

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 75  RLPQQ---PGSAQEVQPSAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 131

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 132 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 190

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++       L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 191 N-QFVVHRSPHPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 247

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD
Sbjct: 248 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 307

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
             G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 308 LAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 367

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 368 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 427

Query: 399 P 399
           P
Sbjct: 428 P 428


>gi|56479691|ref|NP_706494.2| translocation protein TolB [Shigella flexneri 2a str. 301]
 gi|32699693|sp|Q83MM7|TOLB_SHIFL RecName: Full=Protein tolB; Flags: Precursor
 gi|56383242|gb|AAN42201.2| periplasmic protein [Shigella flexneri 2a str. 301]
          Length = 430

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 185/421 (43%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 19  LHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRA 74

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 75  RLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 131

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 132 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 190

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++       L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 191 N-QFVVHRSPHPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 247

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD
Sbjct: 248 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 307

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
             G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 308 LAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 367

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 368 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 427

Query: 399 P 399
           P
Sbjct: 428 P 428


>gi|312171769|emb|CBX80027.1| Protein tolB precursor [Erwinia amylovora ATCC BAA-2158]
          Length = 430

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 202/423 (47%), Gaps = 29/423 (6%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVA-TNSANYS-PVSIAFTKFVSIDELGGKVSEVVSK 71
           ++ L +L++ I        HA V++  T   N + P+ +   K+         +  +V+ 
Sbjct: 6   RVALSVLMLFI-----AVAHAEVRIEITQGVNTARPIGVMPFKWDGPGAAPEDIGAIVAA 60

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+ S  FN I +    Q+   P S+   Q   W +LG   ++ G+V         V ++
Sbjct: 61  DLRNSGKFNPIDRARLPQQ---PTSVAEVQPAAWTALGIDAVIVGQVQPGADGSYAVSYQ 117

Query: 130 LWDV-KDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           L D   +   ++ +  F     W R  AHT SD+ ++ +T  KG F +RI +V ++   G
Sbjct: 118 LVDTSANPGAVLAQNQFKVTKQWLRYAAHTASDESFEKLTAIKGAFRTRIAYVVQTN-GG 176

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L V D DG N +++     Q L  P +SP+  KVAY T+  E      ++ T  +
Sbjct: 177 QFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTF--ESGKSALVIQTLAN 233

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+  + +   
Sbjct: 234 GAIRQVASFPRHNGAPSFSPDGSKLAFALSKTGSLNLYVMDVGSGQIRQVTDGRYNSTEP 293

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++ PDS  + + SD+ G+ Q+Y +  NG   +RI+ +   +    V +    ++  +  S
Sbjct: 294 TWFPDSQSLAYTSDQAGRPQIYKIGVNGGTAQRITWEGAQNQDADVSADGKSMVMISTNS 353

Query: 368 GEKFAIGVMKKD---GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           G +    V ++D   G+ ++L   D+ L + P+ +P+G  +I+S  +    GS L  +  
Sbjct: 354 GAQH---VARQDLVTGAVQKL--TDTFLDETPSLAPNGTMVIYSSTQ--GMGSVLQLVST 406

Query: 424 NGR 426
           +GR
Sbjct: 407 DGR 409


>gi|223673842|pdb|2W8B|A Chain A, Crystal Structure Of Processed Tolb In Complex With  Pal
          Length = 409

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 171/382 (44%), Gaps = 54/382 (14%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKD 122
           +  +V+ DL+ S  FN + +    Q+   P S    Q   W++LG   +V G+V      
Sbjct: 33  IGGIVAADLRNSGKFNPLDRARLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDG 89

Query: 123 RLRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFV 180
              V ++L D       ++ +  +     W R   HT SD++++ +TG KG F +RI +V
Sbjct: 90  SYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYV 149

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            ++   G     L V D DG N +++     Q L  P +SP+  K+AY T+  E      
Sbjct: 150 VQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSAL 205

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           ++ T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+ 
Sbjct: 206 VIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG 265

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEA--------- 347
              N   ++ PDS  + F SD+ G+ Q+Y +  NG   +RI    SQ+++A         
Sbjct: 266 RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFM 325

Query: 348 ---------------------------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                                      ++ D  P  +P G ++ ++   G    + ++  
Sbjct: 326 VMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVLYSSSQGMGSVLNLVST 385

Query: 379 DGS-QERLLVEDSNLQAPTWSP 399
           DG  + RL   D  ++ P WSP
Sbjct: 386 DGRFKARLPATDGQVKFPAWSP 407


>gi|332096497|gb|EGJ01493.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           dysenteriae 155-74]
          Length = 405

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 171/382 (44%), Gaps = 54/382 (14%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKD 122
           +  +V+ DL+ S  FN + +    Q+   P S    Q   W++LG   +V G+V      
Sbjct: 29  IGGIVAADLRNSGKFNPLDRARLPQQ---PGSAQEVQPGAWSALGIDAVVVGQVTPNPDG 85

Query: 123 RLRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFV 180
              V ++L D       ++ +  +     W R   HT SD++++ +TG KG F +RI +V
Sbjct: 86  SYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYV 145

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            ++   G     L V D DG N +++     Q L  P +SP+  K+AY T+  E      
Sbjct: 146 VQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSAL 201

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           ++ T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+ 
Sbjct: 202 VIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG 261

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEA--------- 347
              N   ++ PDS  + F SD+ G+ Q+Y +  NG   +RI    SQ+++A         
Sbjct: 262 RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFM 321

Query: 348 ---------------------------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                                      ++ D  P  +P G ++ ++   G    + ++  
Sbjct: 322 VMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST 381

Query: 379 DGS-QERLLVEDSNLQAPTWSP 399
           DG  + RL   D  ++ P WSP
Sbjct: 382 DGRFKARLPATDGQVKFPAWSP 403


>gi|332097645|gb|EGJ02620.1| tol-Pal system beta propeller repeat protein TolB [Shigella boydii
           3594-74]
          Length = 405

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 171/382 (44%), Gaps = 54/382 (14%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKD 122
           +  +V+ DL+ S  FN + +    Q+   P S    Q   W++LG   +V G+V      
Sbjct: 29  IGGIVAADLRNSGKFNPLDRARLPQQ---PGSAQEVQPSAWSALGIDAVVVGQVTPNPDG 85

Query: 123 RLRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFV 180
              V ++L D       ++ +  +     W R   HT SD++++ +TG KG F +RI +V
Sbjct: 86  SYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYV 145

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            ++   G     L V D DG N +++     Q L  P +SP+  K+AY T+  E      
Sbjct: 146 VQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSAL 201

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           ++ T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+ 
Sbjct: 202 VIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG 261

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEA--------- 347
              N   ++ PDS  + F SD+ G+ Q+Y +  NG   +RI    SQ+++A         
Sbjct: 262 RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFM 321

Query: 348 ---------------------------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                                      ++ D  P  +P G ++ ++   G    + ++  
Sbjct: 322 VMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST 381

Query: 379 DGS-QERLLVEDSNLQAPTWSP 399
           DG  + RL   D  ++ P WSP
Sbjct: 382 DGRFKARLPATDGQVKFPAWSP 403


>gi|170732122|ref|YP_001764069.1| translocation protein TolB [Burkholderia cenocepacia MC0-3]
 gi|226705868|sp|B1JWH3|TOLB_BURCC RecName: Full=Protein tolB; Flags: Precursor
 gi|169815364|gb|ACA89947.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           cenocepacia MC0-3]
          Length = 431

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 190/442 (42%), Gaps = 16/442 (3%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G    ++ +A V V       +   IA   F +   L  +++
Sbjct: 3   LMTKLGFRALVASCLITAG----SAANAQVNVLITGVGSTQFPIATANFTNEANLPQQIT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I  D+    +    S+     W + GA   V G V ++   + +V
Sbjct: 59  SIVRADLARSGKFTNI--DAGSTPVPETASV-DLGAWKAKGANAFVAGSVNRDANGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++   
Sbjct: 116 NFILYDTVKQQSLGGLSLTATDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +     +++       IY+V+       RLT +  I+  
Sbjct: 230 GRR-YMVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNANGGGLRRLTQSSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFT 364
             YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+ 
Sbjct: 289 PFYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYI 348

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +G  F + V          +   +  ++P+++ +G+ L+++ +  G         D +
Sbjct: 349 SRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYLLYATQSGGRNVLAAVPSDGS 408

Query: 425 GRNETLINTPAYASDPQWVGFM 446
              + L        +P W  FM
Sbjct: 409 APPQILSVQGGSVREPSWGPFM 430


>gi|223673843|pdb|2W8B|B Chain B, Crystal Structure Of Processed Tolb In Complex With  Pal
 gi|223673844|pdb|2W8B|D Chain D, Crystal Structure Of Processed Tolb In Complex With  Pal
 gi|223673845|pdb|2W8B|F Chain F, Crystal Structure Of Processed Tolb In Complex With  Pal
          Length = 409

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 171/382 (44%), Gaps = 54/382 (14%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKD 122
           +  +V+ DL+ S  FN + +    Q+   P S    Q   W++LG   +V G+V      
Sbjct: 33  IGGIVAADLRNSGKFNPLDRARLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDG 89

Query: 123 RLRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFV 180
              V ++L D       ++ +  +     W R   HT SD++++ +TG KG F +RI +V
Sbjct: 90  SYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYV 149

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            ++   G     L V D DG N +++     Q L  P +SP+  K+AY T+  E      
Sbjct: 150 VQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSAL 205

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           ++ T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+ 
Sbjct: 206 VIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG 265

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEA--------- 347
              N   ++ PDS  + F SD+ G+ Q+Y +  NG   +RI    SQ+++A         
Sbjct: 266 RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFM 325

Query: 348 ---------------------------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                                      ++ D  P  +P G ++ ++   G    + ++  
Sbjct: 326 VMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST 385

Query: 379 DGS-QERLLVEDSNLQAPTWSP 399
           DG  + RL   D  ++ P WSP
Sbjct: 386 DGRFKARLPATDGQVKFPAWSP 407


>gi|145579533|pdb|2HQS|A Chain A, Crystal Structure Of TolbPAL COMPLEX
 gi|145579535|pdb|2HQS|B Chain B, Crystal Structure Of TolbPAL COMPLEX
 gi|145579537|pdb|2HQS|D Chain D, Crystal Structure Of TolbPAL COMPLEX
 gi|145579539|pdb|2HQS|F Chain F, Crystal Structure Of TolbPAL COMPLEX
          Length = 415

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 171/382 (44%), Gaps = 54/382 (14%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKD 122
           +  +V+ DL+ S  FN + +    Q+   P S    Q   W++LG   +V G+V      
Sbjct: 33  IGGIVAADLRNSGKFNPLDRARLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDG 89

Query: 123 RLRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFV 180
              V ++L D       ++ +  +     W R   HT SD++++ +TG KG F +RI +V
Sbjct: 90  SYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYV 149

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            ++   G     L V D DG N +++     Q L  P +SP+  K+AY T+  E      
Sbjct: 150 VQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSAL 205

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           ++ T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+ 
Sbjct: 206 VIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG 265

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEA--------- 347
              N   ++ PDS  + F SD+ G+ Q+Y +  NG   +RI    SQ+++A         
Sbjct: 266 RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFM 325

Query: 348 ---------------------------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                                      ++ D  P  +P G ++ ++   G    + ++  
Sbjct: 326 VMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST 385

Query: 379 DGS-QERLLVEDSNLQAPTWSP 399
           DG  + RL   D  ++ P WSP
Sbjct: 386 DGRFKARLPATDGQVKFPAWSP 407


>gi|309786419|ref|ZP_07681045.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           dysenteriae 1617]
 gi|308925813|gb|EFP71294.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           dysenteriae 1617]
          Length = 405

 Score =  122 bits (305), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 172/382 (45%), Gaps = 54/382 (14%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKD 122
           +  +V+ DL+ S  FN + +    Q+   P S    Q   W++LG   +V G+V      
Sbjct: 29  IGGIVAADLRNSGKFNPLDRARLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDG 85

Query: 123 RLRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFV 180
              V ++L D       ++ +  +     W R  +HT SD++++ +TG KG F +RI +V
Sbjct: 86  SYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYASHTASDEVFEKLTGIKGAFRTRIAYV 145

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            ++   G     L V D DG N +++     Q L  P +SP+  K+AY T+  E      
Sbjct: 146 VQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSAL 201

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           ++ T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+ 
Sbjct: 202 VIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG 261

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEA--------- 347
              N   ++ PDS  + F SD+ G+ Q+Y +  NG   +RI    SQ+++A         
Sbjct: 262 RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFM 321

Query: 348 ---------------------------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                                      ++ D  P  +P G ++ ++   G    + ++  
Sbjct: 322 VMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVST 381

Query: 379 DGS-QERLLVEDSNLQAPTWSP 399
           DG  + RL   D  ++ P WSP
Sbjct: 382 DGRFKARLPATDGQVKFPAWSP 403


>gi|193212307|ref|YP_001998260.1| Tol-Pal system beta propeller repeat protein TolB [Chlorobaculum
           parvum NCIB 8327]
 gi|193085784|gb|ACF11060.1| Tol-Pal system beta propeller repeat protein TolB [Chlorobaculum
           parvum NCIB 8327]
          Length = 434

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 168/343 (48%), Gaps = 20/343 (5%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S+GA V V G V K+  D   ++ ++WDV   K ++ +K+     + R I      D+ +
Sbjct: 103 SIGADVFVGGSVTKQSGDPA-MQMQVWDVTG-KLLLNRKYSGQDKALRDIGLRFCADLVE 160

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +TG++  F ++++FVS S  +G  +  +C  D DG NIR LT ++  I   P  SP+ +
Sbjct: 161 MLTGKRSVFGTKMVFVSNS--TGQKEIYMC--DFDGTNIRQLTNTKS-ISLTPSVSPDGR 215

Query: 225 KVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            +A+  +      L +  + T    + K+ G    + ++P +         ++  + + D
Sbjct: 216 FLAWTDFSSGRPDLYIKNLSTGSTVSVKKQG----VCISPAWRPGTNECATTLSYEGSQD 271

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +Y +        RLT    I +S S+SPD S++ F S REG  Q+++   +    +R++ 
Sbjct: 272 LYLIRADGTVARRLTRGHSIEVSPSFSPDGSKMAFVSTREGPPQIFIQDLSSGSVRRLTY 331

Query: 344 DKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPS 400
               +   P WSP GD I ++    +GE   I ++  DGS    L   + N + P+WSP 
Sbjct: 332 SGTYNT-QPSWSPSGDKILYSSLQKNGE-INIFMINVDGSNLLQLTSGARNNEYPSWSPD 389

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQW 442
           G  ++FS  + G    KLY ++++G N+  L+N       P W
Sbjct: 390 GSMIVFSSTRAGS--RKLYVMNVDGTNQRPLLNMKGEQQQPSW 430



 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 5/164 (3%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L ++  DG   R LT     I   P FSP+  K+A+ +   E   ++++ D     + +R
Sbjct: 272 LYLIRADGTVARRLTRGHS-IEVSPSFSPDGSKMAFVS-TREGPPQIFIQDLS-SGSVRR 328

Query: 253 IGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +    +    P +S +G + L S +QK+  ++I+ +++  +   +LT+    N   S+SP
Sbjct: 329 LTYSGTYNTQPSWSPSGDKILYSSLQKNGEINIFMINVDGSNLLQLTSGARNNEYPSWSP 388

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           D S IVF S R G  +LYVM  +G++Q+ +  + +     P WS
Sbjct: 389 DGSMIVFSSTRAGSRKLYVMNVDGTNQRPL-LNMKGEQQQPSWS 431


>gi|107021875|ref|YP_620202.1| translocation protein TolB [Burkholderia cenocepacia AU 1054]
 gi|118574572|sp|Q1BYS6|TOLB_BURCA RecName: Full=Protein tolB; Flags: Precursor
 gi|105892064|gb|ABF75229.1| TolB-like protein [Burkholderia cenocepacia AU 1054]
          Length = 431

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 190/442 (42%), Gaps = 16/442 (3%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G    ++ +A V V       +   IA   F +   L  +V+
Sbjct: 3   LMTKLGFRALVASCLITAG----SAANAQVNVLITGVGSTQFPIATANFTNEANLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I  D+    +    S+     W + GA   V G V ++   + +V
Sbjct: 59  SIVRADLARSGKFTNI--DAGSTPVPETASV-DLGAWKAKGANAFVAGSVNRDANGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++   
Sbjct: 116 NFILYDTVKQQSLGGLSLTATDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNARIALSSTEPII-SPAWSPSSTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +     +++       IY+V+       RLT +  I+  
Sbjct: 230 GRR-YMVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNANGGGLRRLTQSSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFT 364
             YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+ 
Sbjct: 289 PFYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYI 348

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +G  F + V          +   +  ++P+++ +G+ ++++ +  G         D +
Sbjct: 349 SRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYVLYATQSGGRNVLAAVPSDGS 408

Query: 425 GRNETLINTPAYASDPQWVGFM 446
              + L        +P W  FM
Sbjct: 409 APPQILSVQGGSVREPSWGPFM 430


>gi|253990433|ref|YP_003041789.1| translocation protein TolB [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781883|emb|CAQ85047.1| periplasmic protein involved in the tonb-independent uptake of
           group colicins [Photorhabdus asymbiotica]
          Length = 451

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/433 (23%), Positives = 186/433 (42%), Gaps = 57/433 (13%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           K+ L +L++ +     T  HA V++       +  P+ I   K+        ++  +V  
Sbjct: 27  KVMLSILMLWV-----TVAHAEVRIEITQGVDSARPIGIVPFKWTGASNAPEEIGTIVGA 81

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  FN I      Q+ T    +     W++LG   +V G++         + ++L 
Sbjct: 82  DLRNSGKFNPIDASRMPQQPTTASEVTP-AAWSALGIDAVVVGQIQPSADGSFLISYQLV 140

Query: 132 DVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           D       ++ +  F     W R  AHT SD++++ +TG KG F +R+ ++ ++   G  
Sbjct: 141 DTAGAPGTVLAQNQFKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRLAYIVKTN-GGKY 199

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L V D DG N ++      + L  P +SP+  K+AY T+  E      ++ T     
Sbjct: 200 PYELRVSDYDGYN-QFTVHRSPEPLMSPAWSPDGAKLAYVTF--ESGRSALVIQTLASGE 256

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   S+
Sbjct: 257 VRQVASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMDLSSAQIRQVTDGRSNNTEPSW 316

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------QDKEAS--------------- 348
            PD+  +V+ SD+ G+ QLY +  NG   +R++      QD + S               
Sbjct: 317 MPDNQTLVYTSDQGGRPQLYKININGGAPQRLTWEGTQNQDADVSADGNFVVMVSSESGK 376

Query: 349 -------------------YFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLL 386
                              + D  P  +P G ++ ++   G    + ++  DG  + RL 
Sbjct: 377 QHIAKQDLATGAVQTLTDTFLDETPSIAPNGTMVIYSSTQGLGTVLQLVSTDGRFKARLP 436

Query: 387 VEDSNLQAPTWSP 399
             D  ++ P WSP
Sbjct: 437 ATDGQVKFPAWSP 449


>gi|307262896|ref|ZP_07544520.1| hypothetical protein appser13_3210 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|306871801|gb|EFN03521.1| hypothetical protein appser13_3210 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 426

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 186/404 (46%), Gaps = 28/404 (6%)

Query: 50  IAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
           IA   F +   +   V ++++ DL+ S  F  + +     +  +   +   Q W  +G  
Sbjct: 42  IAVVPFKANGGVPADVGQIIADDLRNSGKFTPVERSKLPAQPGSAAEV-NSQQWTDIGVD 100

Query: 110 VLVTGRVIKEGKDRLRVEFRLWD-VKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSIT 167
            +V G+V   G     V ++L D + +   ++ +  F+ PA+  R+ AHT+SD +++ IT
Sbjct: 101 SVVVGQVTPTGGG-YNVAYQLVDTLSNPATVLAQGAFNVPAAQIRQGAHTVSDQVFEKIT 159

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +G F ++I +V   V  G+    L V D DG N   +  S++  L  P +SP+  ++A
Sbjct: 160 QIRGAFRTKIAYV---VQRGVSSYELRVSDYDGYNAFTVVKSKEP-LMSPEWSPDGSRLA 215

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y T++++   +V + D     + + +   R    AP FS +G R   +  +D  +DIY V
Sbjct: 216 YVTFENKK-AQVVVHDL-CSGSRRVVAALRGHNGAPAFSPDGSRIAFASNQDGELDIYVV 273

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                   +LT     N   S+SPD S I F SDR G  Q+Y M S+G     +      
Sbjct: 274 GANGGKPSKLTANAGNNTEPSWSPDGSTIYFTSDRAGSPQVYRMGSSGGGASPMG--GSG 331

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
           SY   V S   +LI     +G+K    V+K+D +     V  S    ++P+ SP+G  +I
Sbjct: 332 SYNAKVSSDGKNLI---MIAGDK----VVKRDLASGGTEVLSSTFLDESPSISPNGIMVI 384

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFM 446
           +S  K   T   L  +  +GR +   N P        P W  ++
Sbjct: 385 YSSTK--GTSKVLQLVSADGRFKA--NLPGAGGQFKFPAWSPYL 424


>gi|209364240|ref|YP_001425326.2| TolB [Coxiella burnetii Dugway 5J108-111]
 gi|212213381|ref|YP_002304317.1| TolB [Coxiella burnetii CbuG_Q212]
 gi|215918884|ref|NP_819142.2| TolB [Coxiella burnetii RSA 493]
 gi|206583769|gb|AAO89656.2| TolB [Coxiella burnetii RSA 493]
 gi|207082173|gb|ABS77388.2| TolB [Coxiella burnetii Dugway 5J108-111]
 gi|212011791|gb|ACJ19172.1| TolB [Coxiella burnetii CbuG_Q212]
          Length = 440

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 14/364 (3%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           + +V+  DLQ S  F +    +  Q   + + I  +  W       LV G +   G  R 
Sbjct: 60  IPQVIKNDLQNSGQFRVTGSGNLDQTAASLEQI-DYSYWRKQKVNALVVGAINPLGMRRY 118

Query: 125 RVEFRLWDVKD-RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--- 180
           RV F L +V D   +++ + F  +    R +AH ISD IYQ +TG +G F+++I +V   
Sbjct: 119 RVAFTLINVFDSNNRLLSESFNVNAKELRNLAHHISDLIYQKLTGVRGVFSTKIAYVLVQ 178

Query: 181 --SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
             SE+  +   K +L V D DG N + L  S D  +  P +SP+  K+AY +++      
Sbjct: 179 ASSENTAA---KYTLEVADADGFNPQPLLVS-DMPIMSPTWSPDGNKIAYVSFEGHRA-A 233

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +YL D    R  +R+     +  AP FS +GK+  + + K     IY ++L       +T
Sbjct: 234 IYLQDLATGRR-QRLSEAPGINGAPAFSPDGKQLALVLTKTGNPKIYILNLADGHLREIT 292

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               I+   ++SPD   ++F S+R+G  Q+Y          R++   + +   P + P G
Sbjct: 293 KGWSIDTEPAWSPDGKSLLFTSNRDGTPQIYNYSFADGSINRVTYRGDYN-ARPSFMPDG 351

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             I         F I        Q ++L E    ++P+ +P+G+  I++ +  G      
Sbjct: 352 KSIIMMHRENGLFGIARQDLSTGQVQILSESGTDESPSLAPNGKMAIYAMEYGGRGVLAQ 411

Query: 419 YSID 422
            SID
Sbjct: 412 VSID 415


>gi|254516703|ref|ZP_05128762.1| Tol-Pal system beta propeller repeat protein TolB [gamma
           proteobacterium NOR5-3]
 gi|219675126|gb|EED31493.1| Tol-Pal system beta propeller repeat protein TolB [gamma
           proteobacterium NOR5-3]
          Length = 428

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 187/417 (44%), Gaps = 69/417 (16%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
           PT + A V  A   A  +PV +A               +VV +D +RS  F+ +++    
Sbjct: 31  PTPV-AVVPFAWEGAGNAPVDMA---------------QVVQEDFERSGQFSPVNRADML 74

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
              +  + +  ++DW ++ ++ ++ GR   EG D+L + + L+DV  + +I         
Sbjct: 75  GFPSREEEV-FYRDWRAIASEYVLIGRASGEG-DQLSLRYELYDVLRQARIAEGSVAGPA 132

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLT 207
              R +AH +SD +Y+ +TG  G F +R+++VS +   +G     L + D DGA    L 
Sbjct: 133 GEARMLAHRVSDAVYEKLTGIPGAFATRLIYVSVTRNPTGKDYYRLTLADSDGARPIVLL 192

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDD--EDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            SR+ I+  P ++P+ ++VAY +++     I R  L     ++    + NFR +  +P +
Sbjct: 193 ESREPIM-SPSWAPDGKQVAYVSFETGRPAIFRQVLATGEREQ----LTNFRGLNSSPAW 247

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G    + + KD + DIY +D+ +    R+T+   I+   S+ PD    +F SDR G+
Sbjct: 248 SPDGNSMAMVLSKDGSPDIYLMDMATRRLTRVTSHYAIDTEPSWMPDGRSFLFTSDRGGR 307

Query: 326 EQLY------------VMQSNGSDQKRISQD---------KEASY--------------- 349
            Q+Y              + N + + R++QD         +E  +               
Sbjct: 308 PQIYRYDLRSGLTERVTFEGNYNARARVAQDGRNVVLVHQREGEFQIAIHDLVSNRLQVL 367

Query: 350 ------FDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                   P  +P G ++ + TKF        V    G + RL   + +++ P WSP
Sbjct: 368 TNTDLDESPSIAPNGSMVLYATKFGDRGILSAVSVDGGVKFRLPARNGDVREPAWSP 424


>gi|161831311|ref|YP_001596058.1| TolB protein [Coxiella burnetii RSA 331]
 gi|32699692|sp|Q83F59|TOLB_COXBU RecName: Full=Protein tolB; Flags: Precursor
 gi|161763178|gb|ABX78820.1| TolB protein [Coxiella burnetii RSA 331]
          Length = 437

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 166/364 (45%), Gaps = 14/364 (3%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           + +V+  DLQ S  F +    +  Q   + + I  +  W       LV G +   G  R 
Sbjct: 57  IPQVIKNDLQNSGQFRVTGSGNLDQTAASLEQI-DYSYWRKQKVNALVVGAINPLGMRRY 115

Query: 125 RVEFRLWDVKD-RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--- 180
           RV F L +V D   +++ + F  +    R +AH ISD IYQ +TG +G F+++I +V   
Sbjct: 116 RVAFTLINVFDSNNRLLSESFNVNAKELRNLAHHISDLIYQKLTGVRGVFSTKIAYVLVQ 175

Query: 181 --SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
             SE+  +   K +L V D DG N + L  S D  +  P +SP+  K+AY +++      
Sbjct: 176 ASSENTAA---KYTLEVADADGFNPQPLLVS-DMPIMSPTWSPDGNKIAYVSFEGHRA-A 230

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +YL D    R  +R+     +  AP FS +GK+  + + K     IY ++L       +T
Sbjct: 231 IYLQDLATGRR-QRLSEAPGINGAPAFSPDGKQLALVLTKTGNPKIYILNLADGHLREIT 289

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               I+   ++SPD   ++F S+R+G  Q+Y          R++   + +   P + P G
Sbjct: 290 KGWSIDTEPAWSPDGKSLLFTSNRDGTPQIYNYSFADGSINRVTYRGDYN-ARPSFMPDG 348

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             I         F I        Q ++L E    ++P+ +P+G+  I++ +  G      
Sbjct: 349 KSIIMMHRENGLFGIARQDLSTGQVQILSESGTDESPSLAPNGKMAIYAMEYGGRGVLAQ 408

Query: 419 YSID 422
            SID
Sbjct: 409 VSID 412


>gi|330896134|gb|EGH28355.1| translocation protein TolB [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 308

 Score =  121 bits (304), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 161/312 (51%), Gaps = 9/312 (2%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVK---VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           INL   L+++  F    + A  K   V + S   +P+++    +   + L   ++E++S 
Sbjct: 2   INLFRGLLVVLCFASAMVSAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIISN 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L+
Sbjct: 62  DLRNSGYYAPIPKQNMISLPTQASEV-IFRDWKALGAQYVMVGNITPAG-GRLQIQYALF 119

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIK 190
           +V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+ E       +
Sbjct: 120 NVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNTR 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L   D DGA    L  SR+ IL  PRF+P+ +++AY +++ +   R+++      R  
Sbjct: 180 YTLQRSDYDGARAVTLLQSREPIL-SPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGRR- 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    + 
Sbjct: 237 EQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFFG 296

Query: 311 PDSSQIVFESDR 322
            D S + F SDR
Sbjct: 297 KDGSTLYFTSDR 308



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 7/102 (6%)

Query: 329 YVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQER 384
           Y +Q +  D  R   + Q +E     P ++P G  IA+  F  ++  I V   D G +E+
Sbjct: 180 YTLQRSDYDGARAVTLLQSREP-ILSPRFAPDGKRIAYVSFEQKRPRIFVQHIDTGRREQ 238

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +   +    AP WSP G  L F   KDG+   ++Y I+L  R
Sbjct: 239 ITNFEGLNGAPAWSPDGSKLAFVLSKDGN--PEIYVINLASR 278


>gi|157146634|ref|YP_001453953.1| translocation protein TolB [Citrobacter koseri ATCC BAA-895]
 gi|157083839|gb|ABV13517.1| hypothetical protein CKO_02400 [Citrobacter koseri ATCC BAA-895]
          Length = 431

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 184/421 (43%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++       S   I    F       + +++GG    +V  DL+ S  FN + + 
Sbjct: 20  LHAEVRIEITQGVDSARPIGVVPFQWAGPGAAPEDIGG----IVGADLRNSGKFNPLDRS 75

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P +    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 76  RLPQQ---PGTAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 132

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 133 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 191

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 192 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 248

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +D+ S    ++T+    N   ++ PDS  + F SD
Sbjct: 249 APAFSPDGSKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 308

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 309 QAGRPQVYKVNVNGGAPQRITWEGSQNQDADVSSDGKFMVMVSSANGQQHIAKQDLVAGG 368

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 369 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 428

Query: 399 P 399
           P
Sbjct: 429 P 429


>gi|116688823|ref|YP_834446.1| translocation protein TolB [Burkholderia cenocepacia HI2424]
 gi|254246220|ref|ZP_04939541.1| TolB [Burkholderia cenocepacia PC184]
 gi|166229976|sp|A0K4X6|TOLB_BURCH RecName: Full=Protein tolB; Flags: Precursor
 gi|116646912|gb|ABK07553.1| TolB, N-terminal domain protein [Burkholderia cenocepacia HI2424]
 gi|124870996|gb|EAY62712.1| TolB [Burkholderia cenocepacia PC184]
          Length = 431

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/442 (23%), Positives = 190/442 (42%), Gaps = 16/442 (3%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G    ++ +A V V       +   IA   F +   L  +V+
Sbjct: 3   LMTKLGFRALVASCLITAG----SAANAQVNVLITGVGSTQFPIATANFTNEANLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I  D+    +    S+     W + GA   V G V ++   + +V
Sbjct: 59  SIVRADLARSGKFTNI--DAGSTPVPETASV-DLGAWKAKGANAFVAGSVNRDANGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++   
Sbjct: 116 NFILYDTVKQQSLGGLSLTATDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +     +++       IY+V+       RLT +  I+  
Sbjct: 230 GRR-YMVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNANGGGLRRLTQSSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFT 364
             YSPD   I F SDR G  Q+Y M + G       +      ++  P  SP G L+A+ 
Sbjct: 289 PFYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYI 348

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +G  F + V          +   +  ++P+++ +G+ ++++ +  G         D +
Sbjct: 349 SRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYVLYATQSGGRNVLAAVPSDGS 408

Query: 425 GRNETLINTPAYASDPQWVGFM 446
              + L        +P W  FM
Sbjct: 409 APPQILSVQGGSVREPSWGPFM 430


>gi|194337187|ref|YP_002018981.1| WD40 domain protein beta Propeller [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194309664|gb|ACF44364.1| WD40 domain protein beta Propeller [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 440

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 162/349 (46%), Gaps = 22/349 (6%)

Query: 100 FQDWNSLGAQVLVTGRV-IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI 158
           F    S+GA+V   G V IK G   + ++  +++    + ++ K +       R I H  
Sbjct: 105 FGALTSVGAEVYAGGTVTIKSGM--INLDMSVYETAGSRLLLRKTYTGKEDELRSIGHAF 162

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
             D+   +TG+   F S+I+FVS +  +G  +   C  D DG  +  LT SR  I   P 
Sbjct: 163 CADLVALLTGKSSVFGSKIVFVSNN--TGYKEIYQC--DFDGYGVEQLTNSR-SITMNPS 217

Query: 219 FSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            SP+ + +AY  +     +LR+  +    +R    +GN   + + P + S G     ++ 
Sbjct: 218 LSPDGRHLAYIDFSSGRSVLRIQNLG---ERKTASVGN-SGVSIDPAWRS-GSEVAATLS 272

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D    IY V      + RLTN+  I+IS ++SPD S++ F S R G  Q+++       
Sbjct: 273 FDGNQQIYLVKTDGTLSRRLTNSRSIDISPAFSPDGSKMAFVSSRNGLPQIFIQDIQSGQ 332

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNLQ-A 394
            KR++     +   P WSP GD IA+T +  +GE   I  +  DGS    L         
Sbjct: 333 VKRLTFSGRYNT-QPSWSPAGDKIAYTTWEKNGE-INIFTVSADGSGLMQLTRRCGENIC 390

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQW 442
           P+WSP G+ ++FS  + G    KLY++D  G +   L+      + P W
Sbjct: 391 PSWSPDGQMIVFSSNRSGK--QKLYTMDSKGDKQRALLQVDGQQTQPSW 437



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 82/162 (50%), Gaps = 5/162 (3%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           ++  DG   R LT SR  I   P FSP+  K+A+ +  +  + ++++ D +  +  KR+ 
Sbjct: 281 LVKTDGTLSRRLTNSR-SIDISPAFSPDGSKMAFVSSRN-GLPQIFIQDIQSGQV-KRLT 337

Query: 255 NFRSMILAPRFSSNG-KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                   P +S  G K A  + +K+  ++I++V    +   +LT     NI  S+SPD 
Sbjct: 338 FSGRYNTQPSWSPAGDKIAYTTWEKNGEINIFTVSADGSGLMQLTRRCGENICPSWSPDG 397

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             IVF S+R GK++LY M S G  Q+ + Q  +     P WS
Sbjct: 398 QMIVFSSNRSGKQKLYTMDSKGDKQRALLQ-VDGQQTQPSWS 438


>gi|271499764|ref|YP_003332789.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Dickeya dadantii Ech586]
 gi|270343319|gb|ACZ76084.1| Tol-Pal system beta propeller repeat protein TolB [Dickeya dadantii
           Ech586]
          Length = 428

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 115/442 (26%), Positives = 200/442 (45%), Gaps = 26/442 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE----V 68
           +KI L  L++     +   +HA V++       S   I    F S    GG V E    +
Sbjct: 5   LKIALSFLML-----WTAVLHAEVRIEITQGVDSARPIGVVPFKST---GGAVPEEIGSI 56

Query: 69  VSKDLQRSDVFNLISQDSFKQKI-TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V+ DL+ S  FN I      Q+  T  +  P    W +LG   +V G+V +   D   V 
Sbjct: 57  VAADLRNSGKFNPIDPSRMPQQPGTAAEVTP--SAWTALGIDAVVVGQV-QPTADGYLVS 113

Query: 128 FRLWDVK-DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           ++L D   +   ++ +  F     W R  AHT SD++++ +TG KG F +RI +V ++  
Sbjct: 114 YQLVDTSGNAGSVLAQNQFKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN- 172

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G     L V D DG N +++     + L  P +SP+  K+AY T+  E      ++ T 
Sbjct: 173 GGQYPYELRVADYDGYN-QFVVHRSPEPLMSPAWSPDGSKLAYVTF--ESGRSALVVQTL 229

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +   ++I +F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N 
Sbjct: 230 ANGDIRQIASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMNLGSGQISQVTDGRSNNT 289

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++ PDS  + + SD+ G+ Q+Y +  NG   +R++ +  A   D   S  G  +    
Sbjct: 290 EPTWFPDSQTLAYTSDQAGRPQIYKIGINGGAPQRLTWEG-AQNQDAEISSDGKFLVMVS 348

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +G    I          ++L +    + P+ +P+G  +I+S K+    GS L  +  +G
Sbjct: 349 SNGGAQHIAKQDLVTGGVQVLTDTFLDETPSIAPNGTMVIYSSKQ--GLGSVLQLVSTDG 406

Query: 426 R-NETLINTPAYASDPQWVGFM 446
           R    L  T      P W  +M
Sbjct: 407 RFKARLPATDGQVRFPTWSPYM 428


>gi|165975760|ref|YP_001651353.1| colicin tolerance protein [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|226705862|sp|B0BT52|TOLB_ACTPJ RecName: Full=Protein tolB; Flags: Precursor
 gi|165875861|gb|ABY68909.1| colicin tolerance protein [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
          Length = 426

 Score =  121 bits (303), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 186/404 (46%), Gaps = 28/404 (6%)

Query: 50  IAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
           IA   F +   +   V ++++ DL+ S  F  + +     +  +   +   Q W  +G  
Sbjct: 42  IAVVPFKANGGVPADVGQIIADDLRNSGKFTPVERSKLPAQPGSAAEV-NSQQWTDIGVD 100

Query: 110 VLVTGRVIKEGKDRLRVEFRLWD-VKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSIT 167
            +V G+V   G     V ++L D + +   ++ +  F+ PA+  R+ AHT+SD +++ IT
Sbjct: 101 SVVVGQVTPTGGG-YNVAYQLVDTLSNPATVLAQGAFNVPAAQIRQGAHTVSDQVFEKIT 159

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +G F ++I +V   V  G+    L V D DG N   +  S++  L  P +SP+  ++A
Sbjct: 160 QIRGAFRTKIAYV---VQRGVSSYELRVSDYDGYNAFTVVKSKEP-LMSPEWSPDGSRLA 215

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y T++++   +V + D R   + + +   R    AP FS +G R   +  +D  +DIY V
Sbjct: 216 YVTFENKK-AQVVVHDLR-SGSRRVVAALRGHNGAPAFSPDGSRIAFASNQDGELDIYVV 273

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                   +LT     N   S+SPD S I F SDR G  Q+Y M  +G     +      
Sbjct: 274 GANGGKPSKLTANAGNNTEPSWSPDGSTIYFTSDRAGSPQVYRMGLSGGGASPMG--GSG 331

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
           SY   V S   +LI     +G+K    V+K+D +     V  S    ++P+ SP+G  +I
Sbjct: 332 SYNAKVSSDGKNLI---MIAGDK----VVKRDLASGGTEVLSSTFLDESPSISPNGIMVI 384

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFM 446
           +S  K   T   L  +  +GR +   N P        P W  ++
Sbjct: 385 YSSTK--GTSKVLQLVSADGRFKA--NLPGAGGQFKFPAWSPYL 424


>gi|251772667|gb|EES53231.1| putative TolB protein [Leptospirillum ferrodiazotrophum]
          Length = 438

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 152/312 (48%), Gaps = 20/312 (6%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           I+  K + +   +  + H   DDI     G +G   SRI F+  +         L  MD 
Sbjct: 136 ILLDKIYRTSGKYALVVHKFVDDILFQFAGIRGVATSRIAFIGRTSHG----YDLFTMDF 191

Query: 199 DGANIRYLTPSRDQIL-FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNF 256
           DG N R +T   D +L F P +S N+  + Y TY   +     ++D  + R  + +  ++
Sbjct: 192 DGENTRRMT--FDNVLAFNPAWSHNKHHILYVTYLHGE---PQIIDYDLVRGQRHLLFSY 246

Query: 257 RSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             + + P FS +GKR  +++ +    +   IY     +   ERLT +   N+S ++SP  
Sbjct: 247 PGLNITPTFSPDGKRLAVALSRGRPSQHTQIYLYAFATKHLERLTYSRSNNLSPTFSPSG 306

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG-EKF 371
           + + F SDR+G  Q+++M S+GS+  R++ +   SY   P WSP+GD IA+   +   + 
Sbjct: 307 NALAFVSDRDGHPQIFLMDSDGSNVHRLTFN--GSYNVAPAWSPRGDWIAYVCMNDMHRP 364

Query: 372 AIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            I ++  DG+   ++ +      +P+WSP GR L+++R+  G +      ID +GR E L
Sbjct: 365 KICLISPDGTSRVMITQGPGRDDSPSWSPDGRFLVYTRQIRGHSKLAKIWIDGHGR-EFL 423

Query: 431 INTPAYASDPQW 442
            N       P W
Sbjct: 424 GNYSRSVLTPSW 435


>gi|113460408|ref|YP_718470.1| translocation protein TolB [Haemophilus somnus 129PT]
 gi|123031156|sp|Q0I1N1|TOLB_HAES1 RecName: Full=Protein tolB; Flags: Precursor
 gi|112822451|gb|ABI24540.1| biopolymer transport protein [Haemophilus somnus 129PT]
          Length = 434

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 183/397 (46%), Gaps = 52/397 (13%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD-WNS 105
           P++I   K+   D +   V++++S DL+ S  FN I+     QK T+   +    D W+S
Sbjct: 41  PIAIIPFKWNGSDSMPIDVADIISADLRNSGKFNPIAVSKMPQKPTSASEV--ISDVWSS 98

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDV----KDRKQIIGKKFFSSPASWRKI-AHTISD 160
           LG   +V G+V    K    + ++L D      +  +++ +  ++ P +  ++ AHTISD
Sbjct: 99  LGIDAVVVGQVTPNEKG-YSIAYQLVDTIGASGNAGEVLSQNQYAVPKNAIRLGAHTISD 157

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           ++++ +T  +G F ++I +V +    G     + V D DG N +++  S  Q L  P +S
Sbjct: 158 EVFEKLTAIRGAFRTKIAYVVQKH-GGSKPYQVRVADYDGHN-QFIVYSSSQPLMSPAWS 215

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKD 279
           P+  K+AY ++++    +  L+   +    +R I  F     AP FS +G +   +  KD
Sbjct: 216 PDGSKLAYVSFENR---KSQLIVHDLQSGARRVIAAFPGHNGAPAFSPDGSKIAFASSKD 272

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-- 337
             ++IY ++L +    +LT+    N   S+SPD   I+F SDR G  Q+Y M   G+   
Sbjct: 273 GVLNIYVMNLGNGTISQLTSGAGNNTEPSWSPDGQSIIFTSDRAGGPQIYQMDVFGNGIS 332

Query: 338 --------QKRISQDK------------------------EASYFD--PVWSPQGDLIAF 363
                     +IS D                          +++ D  P  SP G +I +
Sbjct: 333 LVSAGRGYSGKISADGSILVMIYGDNIVKKDLATGVTEMLSSTFLDESPSISPNGIMIIY 392

Query: 364 TKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           +   G    + ++  DG  + RL   D  ++ P WSP
Sbjct: 393 SSTQGLGKVLQLVSADGRFKARLPSSDGQIKFPAWSP 429


>gi|304413883|ref|ZP_07395300.1| translocation protein [Candidatus Regiella insecticola LSR1]
 gi|304283603|gb|EFL91998.1| translocation protein [Candidatus Regiella insecticola LSR1]
          Length = 433

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 184/373 (49%), Gaps = 27/373 (7%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           ++ +V+ DL+ S  FN I +    ++ ++ + I     W++LG   +V G++    +   
Sbjct: 56  IAAIVAADLRNSGKFNPIDKTRMPERPSSAEEITP-SAWSALGINAVVIGQIQPSVEGHY 114

Query: 125 RVEFRLWDVKDR-KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            + ++L D     K ++ +  +     W R  +HT SD+I++ +TG KG F +RI ++ +
Sbjct: 115 LISYQLVDTSGTVKTVLAQNQYKIKQQWLRHASHTASDEIFEKLTGIKGAFRTRIAYIVQ 174

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +        L V D DG N +++     + L  P +SP+  K+AY T+  E      ++
Sbjct: 175 -IHDKQRPYELRVADYDGHN-QFVVHRSAEPLMSPAWSPDGSKIAYVTF--ESGQSALVV 230

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  +   + I +F     AP FS +G +   ++ K  +++IY +DL S    ++T++  
Sbjct: 231 QTLANSGIREIASFPRHNGAPAFSPDGSKLAFALSKSGSLNIYLMDLASGHITQITDSRS 290

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------QDKEASYFDPVWSP 356
            N   S+ PDS  + + SD+ G+ Q+Y +  N    +RI+      QD E S+       
Sbjct: 291 NNTEPSWFPDSQNLAYTSDQGGRPQVYKININQRAPERITWQGAQNQDVEVSH------- 343

Query: 357 QGDLIAFTKF-SGEKFAIGVMKKDGSQERL-LVEDSNL-QAPTWSPSGRSLIFSRKKDGD 413
            G  +A     SG +    ++K+D S   + ++ DS L + P+ SP+G  +I+S  K G 
Sbjct: 344 DGKFMALVASNSGNQH---IVKQDLSTGAVQVLTDSFLDETPSISPNGLMIIYSSTKRG- 399

Query: 414 TGSKLYSIDLNGR 426
            GS L  +  +GR
Sbjct: 400 VGSVLQLVSTDGR 412


>gi|260772527|ref|ZP_05881443.1| TolB protein precursor [Vibrio metschnikovii CIP 69.14]
 gi|260611666|gb|EEX36869.1| TolB protein precursor [Vibrio metschnikovii CIP 69.14]
          Length = 450

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 194/432 (44%), Gaps = 40/432 (9%)

Query: 41  NSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF 100
           NSA   P++I   K+     L   +S V++ DLQRS  F+ I+ D   Q   +   +  F
Sbjct: 33  NSAR--PIAIVPFKWEGKTPLPEDISAVIASDLQRSGKFSPIATDRMPQTPYSETEV-TF 89

Query: 101 QDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK--------------------DRKQII 140
             W  +G   L+TG +    +    + ++L DV                      +  ++
Sbjct: 90  DAWTRIGVDALLTGSITLNQQGNYVINYQLVDVVRGQLTQGQSRALSADGQLVLSKDHVL 149

Query: 141 GKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS----LCV 195
             K  + PA   R+ AH ISD +Y+ +TGEKG F +RI +V   VV+   K+S    L V
Sbjct: 150 FNKVATIPAPRMREYAHRISDLVYEELTGEKGAFLTRIAYV---VVND--KDSFPYQLRV 204

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N R +  S+ Q L  P +SP+ +++AY ++ +     +++MD       +++ +
Sbjct: 205 ADYDGYNERLVLRSK-QPLMSPAWSPDGRQLAYVSFQNGQA-EIFIMDIYTGER-EKLTS 261

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           +     APRFS +GK   + + K   + +Y++DL S    ++T+    N    + PD   
Sbjct: 262 YPRHNGAPRFSPDGKTLALVLSKTGTLQVYTLDLASRKLTQITHGRSNNTEPFWHPDGKS 321

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           ++F SDR G  Q+Y +        R++     +    + +P G  +     S   F I  
Sbjct: 322 LIFTSDRGGNPQIYRVNLANQAVDRLTWQGRQNLGGQI-TPDGRFMIMVNRSNSGFHIAK 380

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTP 434
              +    ++L +    ++P+ +P+G  +I+S   +      + SID  GR    L  T 
Sbjct: 381 QDLETGALQVLTQTLLDESPSIAPNGGMVIYSSMYNQANVLSMVSID--GRFKARLPATN 438

Query: 435 AYASDPQWVGFM 446
                P W  F+
Sbjct: 439 GRVRSPAWSPFL 450


>gi|85058864|ref|YP_454566.1| translocation protein TolB [Sodalis glossinidius str. 'morsitans']
 gi|119371063|sp|Q2NUL4|TOLB_SODGM RecName: Full=Protein tolB; Flags: Precursor
 gi|84779384|dbj|BAE74161.1| colicin import protein TolB [Sodalis glossinidius str. 'morsitans']
          Length = 430

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 190/437 (43%), Gaps = 32/437 (7%)

Query: 26  GFF---PTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFN 80
           GFF    + +HA V++          P+ +   K+         +  +V+ DL+ S  FN
Sbjct: 10  GFFLLWASVLHAEVRIEITQGVDTARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFN 69

Query: 81  ------LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
                 L  Q +   ++T P        W +LG   +V G+V         V ++L D  
Sbjct: 70  PLDTSRLPQQPATASEVTPPA-------WTALGIDAVVVGQVQPSAAGSYVVSYQLVDTS 122

Query: 135 -DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
            +   I+ +  F     W R  AHT SD+ ++ +TG KG F +RI +V ++   G  +  
Sbjct: 123 GNPGSILAQNQFKVARKWLRYAAHTASDETFEKLTGIKGAFRTRIAYVVQTN-GGQYRYE 181

Query: 193 LCVMDRDGANIRYLTPSR--DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           L V D DG N    TP     Q L  P +SP+  K+AY T+  E      ++ T    A 
Sbjct: 182 LRVADYDGFN---QTPVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLDSGAI 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +++ +F     AP FS +G +    + K   M++Y +DL S    ++T     N   S+ 
Sbjct: 237 RQVASFPQHNGAPAFSPDGSKLAFVLSKTGNMNLYVMDLGSGQVRQVTEGRSNNTEPSWF 296

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PDS  + + SD+ G+ Q+Y    NG   +R+S +   +    V SP G  +     +   
Sbjct: 297 PDSQTLAYTSDQGGRPQVYKTNINGGTPQRLSWEGSQNQNADV-SPDGKFLVMVSTNNGA 355

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NET 429
             I  +    +  ++L +    + P+ +P+G  +I+S  +    GS L  +  +GR    
Sbjct: 356 QHIAKLDLATNAVQVLTDTFLDETPSVAPNGTMVIYSATQ--GLGSVLQLVSTDGRFKAR 413

Query: 430 LINTPAYASDPQWVGFM 446
           L  T     +P W  ++
Sbjct: 414 LPATDGQVKNPAWSPYL 430


>gi|170717585|ref|YP_001783488.1| translocation protein TolB [Haemophilus somnus 2336]
 gi|189035983|sp|B0UVJ6|TOLB_HAES2 RecName: Full=Protein tolB; Flags: Precursor
 gi|168825714|gb|ACA31085.1| Tol-Pal system beta propeller repeat TolB [Haemophilus somnus 2336]
          Length = 434

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/397 (25%), Positives = 182/397 (45%), Gaps = 52/397 (13%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD-WNS 105
           P++I   K+   D +   V++++S DL+ S  FN I+     QK T+   +    D W+S
Sbjct: 41  PIAIIPFKWNGSDSMPIDVADIISADLRNSGKFNPIAVSKMPQKPTSASEV--ISDVWSS 98

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDV----KDRKQIIGKKFFSSPASWRKI-AHTISD 160
           LG   +V G+V    K    + ++L D      +  +++ +  ++ P +  ++ AHTISD
Sbjct: 99  LGIDAVVVGQVTPNEKG-YSIAYQLVDTIGASGNSGEVLSQNQYAVPKNAIRLGAHTISD 157

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           ++++ +T  +G F ++I +V +    G     + + D DG N +++  S  Q L  P +S
Sbjct: 158 EVFEKLTAIRGAFRTKIAYVVQKN-GGSKPYQVRIADYDGHN-QFIVYSSSQPLMSPAWS 215

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKD 279
           P+  K+AY ++++    +  L+   +    +R I  F     AP FS +G +   +  KD
Sbjct: 216 PDGSKLAYVSFENR---KSQLIVHDLQSGARRVIAAFPGHNGAPAFSPDGSKIAFASSKD 272

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             ++IY ++L +    +LT+    N   S+SPD   I+F SDR G  Q+Y M   G+   
Sbjct: 273 GVLNIYVMNLGNGTISQLTSGAGNNTEPSWSPDGQSIIFTSDRAGGPQIYQMDVVGNGVS 332

Query: 340 RISQDK----------------------------------EASYFD--PVWSPQGDLIAF 363
            +S  +                                   +++ D  P  SP G +I +
Sbjct: 333 LVSAGRGYSGKISADGSILVMIYGDNIVKKDLATGVTEMLSSTFLDESPSISPNGIMIIY 392

Query: 364 TKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           +   G    + ++  DG  + RL   D  ++ P WSP
Sbjct: 393 SSTQGLGKVLQLVSADGRFKARLPSSDGQIKFPAWSP 429


>gi|237730721|ref|ZP_04561202.1| translocation protein TolB [Citrobacter sp. 30_2]
 gi|226906260|gb|EEH92178.1| translocation protein TolB [Citrobacter sp. 30_2]
          Length = 431

 Score =  120 bits (301), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 184/421 (43%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++       S   I    F       + +++GG    +V  DL+ S  FN + + 
Sbjct: 20  LHAEVRIEITQGVDSARPIGVVPFQWAGPGAAPEDIGG----IVGADLRNSGKFNPLDRS 75

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P +    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 76  RLPQQ---PGTAQEVQPAAWSALGIDAVVVGQVTPNPDGSYSVAYQLVDTGGAPGTVLAQ 132

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 133 NTYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 191

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 192 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLSNGAVRQVASFPRHNG 248

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +D+ S    ++T+    N   ++ PDS  + F SD
Sbjct: 249 APAFSPDGSKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 308

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 309 QAGRPQVYKVNVNGGAPQRITWEGSQNQDADVSSDGKFMVMVSSANGQQHIAKQDLVAGG 368

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 369 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 428

Query: 399 P 399
           P
Sbjct: 429 P 429


>gi|213649746|ref|ZP_03379799.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 373

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 168/376 (44%), Gaps = 50/376 (13%)

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           ++ DL+ S  FN + +    Q+      + +   W++LG   ++ G V         V +
Sbjct: 1   MAADLRNSGKFNPLDRSRLPQQPATAQEV-QPTAWSALGIDAVIVGLVTPNPDGSYNVAY 59

Query: 129 RLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D       ++ +  +     W R   HT SD++++ +TG KG F +RI +V ++   
Sbjct: 60  QLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-G 118

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     L V D DG N +++     Q L  P +SP+  K+AY T+  E      ++ T  
Sbjct: 119 GQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLA 175

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N  
Sbjct: 176 NGAVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTE 235

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEA--------------- 347
            ++ PDS  + F SD+ G+ Q+Y M  NG   +RI    SQ+++A               
Sbjct: 236 PTWFPDSQTLAFTSDQAGRPQVYKMNINGGAAQRITWEGSQNQDADVSSDGKFMVMVSSN 295

Query: 348 ---------------------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QE 383
                                ++ D  P  +P G ++ ++   G    + ++  DG  + 
Sbjct: 296 NGQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKA 355

Query: 384 RLLVEDSNLQAPTWSP 399
           RL   D  +++P WSP
Sbjct: 356 RLPATDGQVKSPAWSP 371


>gi|283784493|ref|YP_003364358.1| colicin import protein [Citrobacter rodentium ICC168]
 gi|282947947|emb|CBG87511.1| colicin import protein [Citrobacter rodentium ICC168]
          Length = 430

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 184/421 (43%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++       S   I    F       + +++GG    +V  DL+ S  FN + + 
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFQWAGPGAAPEDIGG----IVGADLRNSGKFNPLDRS 74

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P +    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 75  RLPQQ---PGTAQEVQPAAWSALGIDAVVIGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 131

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 132 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 190

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 191 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLSNGAVRQVASFPRHNG 247

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +D+ S    ++T+    N   ++ PDS  + F SD
Sbjct: 248 APAFSPDGSKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 307

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 308 QAGRPQVYKVNVNGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVAGG 367

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WS
Sbjct: 368 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWS 427

Query: 399 P 399
           P
Sbjct: 428 P 428


>gi|297568868|ref|YP_003690212.1| WD40 domain protein beta Propeller [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924783|gb|ADH85593.1| WD40 domain protein beta Propeller [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 431

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 170/346 (49%), Gaps = 17/346 (4%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
           +W   GA+ ++ G   + G +  ++E RL D+   + I G+++ +     R+      D+
Sbjct: 92  NWQRHGAEFVIQGSYREIGGN-FQLELRLLDINAGRMIHGRRYQAPRELVRRQLLRYIDE 150

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFS 220
             + +TG+KG  NS+I FVS++         + + D  G N+R +T  R Q L   PRF+
Sbjct: 151 SVEVLTGKKGISNSKIAFVSDATG----HKEIHLADILGDNVRQVT--RHQYLAVSPRFT 204

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + + + Y ++   +   +Y  + R  +  + I  +  + + P ++ +  R ++++ +D 
Sbjct: 205 RDGEHLTYTSHHRGNA-NLYQTNIRELKTTRAISRWVGLNMTPTWAPDDNRMVLTLSRDG 263

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D+Y  +       RLT+   +N+S S+SPD  ++ F SDR G  Q+Y+M       +R
Sbjct: 264 NPDLYLTERTGKIIRRLTHGEGVNVSPSFSPDGRRLAFVSDRSGTPQIYLMDMRTMAIQR 323

Query: 341 IS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWS 398
           ++ Q  + +   P WSP G  IA+T        I V+  +G   R +     + ++P+WS
Sbjct: 324 LTFQGHDNT--TPSWSPDGKWIAYTSRIDGVLHIAVISPEGGPPRQVTRTWGHHESPSWS 381

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI--NTPAYASDPQW 442
           P  R L+F+R +      +L +I L+G    ++  +     S PQW
Sbjct: 382 PDSRQLVFARLRHDR--EELCAIFLDGSGLRVLFGDQSGNHSMPQW 425



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 3/165 (1%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L + +R G  IR LT   + +   P FSP+ +++A+ + D     ++YLMD R   A +R
Sbjct: 267 LYLTERTGKIIRRLTHG-EGVNVSPSFSPDGRRLAFVS-DRSGTPQIYLMDMRT-MAIQR 323

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +         P +S +GK    + + D  + I  +  +     ++T T   + S S+SPD
Sbjct: 324 LTFQGHDNTTPSWSPDGKWIAYTSRIDGVLHIAVISPEGGPPRQVTRTWGHHESPSWSPD 383

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           S Q+VF   R  +E+L  +  +GS  + +  D+  ++  P WSP+
Sbjct: 384 SRQLVFARLRHDREELCAIFLDGSGLRVLFGDQSGNHSMPQWSPR 428


>gi|219870351|ref|YP_002474726.1| translocation protein TolB [Haemophilus parasuis SH0165]
 gi|219690555|gb|ACL31778.1| dna-J like membrane chaperone, translocation protein TolB/colicin
           tolerance protein/periplasmic component of the Tol
           biopolymer transport system [Haemophilus parasuis
           SH0165]
          Length = 391

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 178/390 (45%), Gaps = 48/390 (12%)

Query: 50  IAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
           IA   F ++  +   V+++++ DL+ S  F  + + S   + ++   +   + W ++G  
Sbjct: 5   IAVIPFKAMGGVPDDVAQIIADDLRNSGKFTPLDRASLPAQPSSAAEV-NPEQWTNIGID 63

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDV----KDRKQIIGKKFFSSPASWRKI-AHTISDDIYQ 164
            +V G+V   G     + ++L D          +I +  F+ PA+  ++ AHT+SD +++
Sbjct: 64  NVVVGQVSAVGGG-YNIAYQLVDTLGTSGAAGNVIAQGSFNVPAAQMRLGAHTVSDQVFE 122

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +T  +G F ++I +V   V  G+    L V D DG N   +  S++  L  P +SP+  
Sbjct: 123 KLTQIRGAFRTKIAYV---VQRGVSSYELRVSDYDGFNAFTIVKSKEP-LMSPEWSPDGS 178

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           K+AY T++++   +V + D R   A K IG+ R    AP FS +G R   +  +D  ++I
Sbjct: 179 KLAYVTFENKK-SQVVVHDIR-SGARKVIGSLRGHNGAPSFSPDGSRVAFASNQDGVLNI 236

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS--------NGS 336
           Y   +   +  +LT+    N   S+SPD   I+F SDR G  Q+Y M S         GS
Sbjct: 237 YVTGVGGGSPRQLTSNAGNNTEPSWSPDGGYILFTSDRGGLPQVYQMSSSGGGASLIGGS 296

Query: 337 DQKRISQDKE------------------------ASYFD--PVWSPQGDLIAFTKFSGEK 370
              +IS D +                        +++ D  P  SP G ++ ++   G  
Sbjct: 297 GSGKISADGKNLIMVSGDRIVRRDLVSGSTEAISSTFLDESPSISPNGTMVIYSSTKGVS 356

Query: 371 FAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
             + ++  DG  +  L       + P WSP
Sbjct: 357 KVLQLVSADGRFKANLPGAGGQYKFPAWSP 386


>gi|227114917|ref|ZP_03828573.1| translocation protein TolB [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 430

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/418 (23%), Positives = 190/418 (45%), Gaps = 17/418 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +K+ L  L+      +   +HA V++       +  P+ +   K+         V  +V 
Sbjct: 5   LKVALSFLM-----LWTAVVHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDVGGIVG 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN I  +   Q+      +     W +LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPIDANRMPQQPATASEVTP-AAWTALGIDAVVVGQVQPSADGSYLVSYQL 118

Query: 131 WDVK-DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D   +   ++ +  F     W R  AHT SD++++ ++G KG F +RI +V ++   G 
Sbjct: 119 VDTSGNPGNVLAQNQFKVTKQWLRYAAHTASDEVFEKLSGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +S +  K+AY T+  E      ++ T  + 
Sbjct: 178 FPYELRVADYDGYN-QFVVHRSPQPLMSPAWSADGSKLAYVTF--ESGRSALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N   +
Sbjct: 235 AIRQVASFPRHNGAPSFSPDGSKLAFALSKSGSLNLYVMNLGSGQISQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + + SD+ G+ Q+Y + +NG   +R++ +   +    V S  G  +     +G
Sbjct: 295 WFPDSQTLAYTSDQAGRPQVYKVNANGGAPQRLTWEGSQNQDSDV-SADGKFLVTVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               I  +       ++L +    + P+ +P+G  +I+S K+    GS L  +  +GR
Sbjct: 354 GAQHISKLDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSKQ--GLGSVLQLVSTDGR 409


>gi|146310896|ref|YP_001175970.1| translocation protein TolB [Enterobacter sp. 638]
 gi|166988076|sp|A4W889|TOLB_ENT38 RecName: Full=Protein tolB; Flags: Precursor
 gi|145317772|gb|ABP59919.1| TolB, N-terminal domain protein [Enterobacter sp. 638]
          Length = 430

 Score =  120 bits (301), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 102/446 (22%), Positives = 194/446 (43%), Gaps = 71/446 (15%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF------VSIDE 60
           + + L + ++  +L   +       +HA V++       S   I    F       + ++
Sbjct: 1   MKQALRVAVSFFMLWAAV-------LHAEVRIEITQGVDSARPIGVVPFQWAGPGAAPED 53

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIK 118
           +GG    +V+ DL+ S  FN + +    Q+   P +    Q   W++LG   +V G+V  
Sbjct: 54  IGG----IVAADLRNSGKFNPLDRSRLPQQ---PGTAQEVQPAAWSALGIDAVVVGQVTP 106

Query: 119 EGKDRLRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSR 176
                  V ++L D       ++ +  +     W R   HT SD++++ +TG KG F +R
Sbjct: 107 SPDGDYNVTYQLVDTGGAPGTVLAQNTYKVNKKWLRYAGHTASDEVFEKLTGIKGAFRTR 166

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I +V ++   G     L V D DG N ++      Q L  P ++P+  K+AY T+  E  
Sbjct: 167 IAYVVQTN-GGQFPYELRVSDYDGYN-QFTVHRSPQPLMSPAWTPDGSKLAYVTF--ESG 222

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
               ++ T  + A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    +
Sbjct: 223 RSALVIQTLSNGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDVGSGQIRQ 282

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEA----- 347
           +T+    N   ++ PDS  + F SD+ G+ Q+Y +  NG   +RI    SQ+++A     
Sbjct: 283 VTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNVNGGTPQRITWEGSQNQDADVSSD 342

Query: 348 -------------------------------SYFD--PVWSPQGDLIAFTKFSGEKFAIG 374
                                          ++ D  P  +P G ++ ++   G    + 
Sbjct: 343 GKTMVMVSSAGGQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLN 402

Query: 375 VMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++  DG  + RL   D  +++P WSP
Sbjct: 403 LVSTDGRFKARLPATDGQVKSPAWSP 428


>gi|261341330|ref|ZP_05969188.1| Tol-Pal system beta propeller repeat protein TolB [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316635|gb|EFC55573.1| Tol-Pal system beta propeller repeat protein TolB [Enterobacter
           cancerogenus ATCC 35316]
          Length = 431

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 100/421 (23%), Positives = 185/421 (43%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++       S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 20  LHAEVRIEITQGVDSARPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRS 75

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P +    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 76  RLPQQ---PGTAQEVQPAAWSALGIDAVVVGQVTPAPDGGYNVAYQLVDTGGAPGTVLAQ 132

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 133 NTYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 191

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N ++      Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 192 N-QFTVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLSNGAVRQVASFPRHNG 248

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +D+ S    ++T+    N   ++ PDS  + F SD
Sbjct: 249 APAFSPDGTKLAFALSKTGSLNLYVMDIGSGQIRQITDGRSNNTEPTWFPDSQNLAFTSD 308

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ+++A                              
Sbjct: 309 QAGRPQVYKVNINGGAAQRITWEGSQNQDADISADGKTMVMVSTAGGQQHIAKQDLVTGG 368

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + R+   D  +++P WS
Sbjct: 369 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARIPATDGQVKSPAWS 428

Query: 399 P 399
           P
Sbjct: 429 P 429


>gi|165918421|ref|ZP_02218507.1| TolB protein [Coxiella burnetii RSA 334]
 gi|165917927|gb|EDR36531.1| TolB protein [Coxiella burnetii RSA 334]
          Length = 437

 Score =  120 bits (300), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 162/361 (44%), Gaps = 8/361 (2%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           + +V+  DLQ S  F +    +  Q   + + I  +  W       LV G +   G  R 
Sbjct: 57  IPQVIKNDLQNSGQFRVTGSGNLDQTAASLEQI-DYSYWRKQKVNALVVGAINPLGMRRY 115

Query: 125 RVEFRLWDVKD-RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--S 181
           RV F L +V D   +++ + F       R  AH ISD IYQ +TG +G F+++I +V   
Sbjct: 116 RVAFTLINVFDSNNRLLSESFNVDAKELRNFAHHISDLIYQKLTGVRGVFSTKIAYVLVQ 175

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            S  +   K +L V D DG N + L  S D  +  P +SP+  K+AY +++      +YL
Sbjct: 176 ASSENTAAKYTLEVADADGFNPQPLLVS-DMPIMSPTWSPDGNKIAYVSFEGHRA-AIYL 233

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    R  +R+     +  AP FS +GK+  + + K     IY ++L       +T   
Sbjct: 234 QDLATGRR-QRLSEAPGINGAPAFSPDGKQLALVLTKTGNPKIYILNLADGHLREITKGW 292

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I+   ++SPD   ++F S+R+G  Q+Y          R++   + +   P + P G  I
Sbjct: 293 SIDTEPAWSPDGKSLLFTSNRDGTPQIYNYSFADGSINRVTYRGDYNA-RPSFMPDGKSI 351

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    F I        Q ++L E    ++P+ +P+G+  I++ +  G       SI
Sbjct: 352 IMMHRENGLFGIARQDLSTGQVQILSESGTDESPSLAPNGKMAIYAMEYGGRGVLAQVSI 411

Query: 422 D 422
           D
Sbjct: 412 D 412


>gi|91792752|ref|YP_562403.1| TolB-like protein [Shewanella denitrificans OS217]
 gi|123356924|sp|Q12PE6|TOLB_SHEDO RecName: Full=Protein tolB; Flags: Precursor
 gi|91714754|gb|ABE54680.1| TolB-like protein [Shewanella denitrificans OS217]
          Length = 442

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 183/384 (47%), Gaps = 36/384 (9%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ--DWNSLGAQVLVTGRVIKEGK 121
           ++S++V  DL RS  F  +   +  Q      S+ +F    W  +GA+ +V G +   G 
Sbjct: 53  QISDIVMGDLSRSGTFKPLDIRALPQH--GISSVAQFAAASWGKVGAEAVVMGSIKPYGV 110

Query: 122 DRLRVEFRLWD-VKDRKQII------------GKKFFSSPASWRKIAHTISDDIYQSITG 168
           D+  V F L D V+ + Q +             ++   S   +R+  H ISD +Y+ +TG
Sbjct: 111 DQFLVNFELIDLVRAQSQALKGPQNNTELVLESRQTVISANQFRQYGHRISDIVYEKLTG 170

Query: 169 EKGDFNSRILFVSESVVSGIIKNS------LCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            +G F +R  +V       ++K        L + D DG N + L  S +  L  P +SP+
Sbjct: 171 IRGAFLTRTAYV-------VVKQGQKAPYHLMIADYDGYNEQMLLRSPEP-LMSPTWSPD 222

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +++AY ++++     +++ D    +    + ++  +  AP FS +GK+  +++ KD   
Sbjct: 223 GRRLAYVSFENRKA-EIFVQDI-YSQTRTLVSSYPGINGAPSFSPDGKKLAVTLSKDGQP 280

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++Y +D+ + A +R+T+   I+   S+ PD   ++F S+R GK Q+Y +  +     R++
Sbjct: 281 EVYVIDIATKAAKRITDHYSIDTEPSWYPDGKSLLFTSERGGKPQIYSVHLDTGKVSRVT 340

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            + E +    + +P G  + F   +  KF I  M       ++L      ++P+ +P+G 
Sbjct: 341 FEGEWNLGGSI-TPDGRSMIFVNRTNGKFHIARMDLATRFLQVLSSTQLDESPSVAPNGT 399

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR 426
            +I+     G     L ++ ++GR
Sbjct: 400 MVIYGTTHQGK--QVLAAVSMDGR 421


>gi|238897410|ref|YP_002923087.1| tol protein B [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|259533857|sp|C4K8V2|TOLB_HAMD5 RecName: Full=Protein tolB; Flags: Precursor
 gi|229465165|gb|ACQ66939.1| tol protein B [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 429

 Score =  119 bits (299), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 105/428 (24%), Positives = 201/428 (46%), Gaps = 35/428 (8%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
            LL +LI   + + +HA V++       +  P+++   K++   E   K+++++S DL+ 
Sbjct: 7   MLLSLLI--LWTSLLHAQVRIQITQGVDSARPIAVVPFKWLGTVEPPEKIADIISSDLRN 64

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  FN I      +K      +     W  LG   +V G++     +   + ++L ++  
Sbjct: 65  SGKFNPIDPSRMPEKPFTASELIT-SSWYGLGVDAVVVGQIQAGADNHYLISYQLVELSS 123

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              +   ++  +    R  AH+ SD+I+Q +TG KG F++RI +V +     +    L +
Sbjct: 124 GTVLTQNQYKVTQQWLRYAAHSASDEIFQKLTGIKGAFSTRIAYVVQKNTRQL-PYELKI 182

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N  ++     Q L  P +SP+ QK+AY  +  E      ++      + ++I N
Sbjct: 183 SDYDGYN-PFVVYRSSQPLMSPAWSPDGQKLAYVNF--ESGRSALVIQNLASGSIQKIAN 239

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F+    AP FS +G +   ++ K  +++IY +DL S    ++T++   N   S+ PDS  
Sbjct: 240 FQGHNGAPAFSPDGAKLAFALSKTGSLNIYMMDLASGNITQITDSRSNNTEPSWFPDSRY 299

Query: 316 IVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           + + SD+ G+ Q+Y +  +G    +RI+ + + +    V SP G            F I 
Sbjct: 300 LAYTSDQAGRPQVYKIDISGHGVPQRITWNAKQNQNSAV-SPDG-----------TFLIL 347

Query: 375 VMKKDGSQE-----------RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           V  KDG Q            ++L +    + P+ +P+   +I+S  ++ ++  +L S D 
Sbjct: 348 VNSKDGQQHIAKQDLKTGDVQILTDTLLDETPSIAPNTTMVIYSSTQNANSVLQLVSTD- 406

Query: 424 NGRNETLI 431
            GR + L+
Sbjct: 407 -GRFKALL 413


>gi|119356690|ref|YP_911334.1| WD40 domain-containing protein [Chlorobium phaeobacteroides DSM
           266]
 gi|119354039|gb|ABL64910.1| WD40 domain protein beta Propeller [Chlorobium phaeobacteroides DSM
           266]
          Length = 442

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 170/348 (48%), Gaps = 20/348 (5%)

Query: 100 FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS 159
           F    S+G+++   GR+ KE    + ++  +++    K I+ K +  S    RK  +  S
Sbjct: 106 FSVLGSVGSEIYAGGRLTKE-SGSVTLDMEVYETLGGKLIMKKSYVGSEGDLRKQGNVFS 164

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            D+ + +TG+K  F S+I+FVS    +G  +   C  D +G NI  LT ++  I   P +
Sbjct: 165 ADLIELLTGKKSLFGSKIVFVSNK--TGFKEIYQC--DFNGQNIEQLTSTK-SISLTPGY 219

Query: 220 SPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           SP+ + +A+  Y      L +  +  R D   ++ G    + + P +  NG+    ++  
Sbjct: 220 SPDGRYLAFTDYTTGRPALHIRSLSDRKDTVLEKNG----VSIDPGWR-NGRELATTLSY 274

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   ++Y   +    + RLT +  I++S ++SPD S++ F S R G  Q+++M  +    
Sbjct: 275 EGDQELYLCKVDGTVSRRLTTSKGIDLSPTFSPDGSRMAFVSSRNGLPQIFIMDVSSGLT 334

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNL-QAP 395
           +R++     +   P WSP GD IA++ +  SGE   I  +  DG+  + L   S   +AP
Sbjct: 335 RRLTYSGRYNT-QPSWSPGGDKIAYSTWEKSGE-INIFTINADGTGLKKLTSGSRENEAP 392

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQW 442
           +WSP G  ++F+  + G+   KL+ +   G N+  L+        P W
Sbjct: 393 SWSPDGSMIVFASNRQGN--KKLFVMGSGGENQKRLLQMDGEQMQPSW 438



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 90/166 (54%), Gaps = 11/166 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD--TRIDRAP 250
           LC +D  G   R LT S+  I   P FSP+  ++A+ +  +  + ++++MD  + + R  
Sbjct: 282 LCKVD--GTVSRRLTTSKG-IDLSPTFSPDGSRMAFVSSRN-GLPQIFIMDVSSGLTRRL 337

Query: 251 KRIGNFRSMILAPRFSSNG-KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              G + +    P +S  G K A  + +K   ++I++++      ++LT+    N + S+
Sbjct: 338 TYSGRYNTQ---PSWSPGGDKIAYSTWEKSGEINIFTINADGTGLKKLTSGSRENEAPSW 394

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           SPD S IVF S+R+G ++L+VM S G +QKR+ Q  +     P WS
Sbjct: 395 SPDGSMIVFASNRQGNKKLFVMGSGGENQKRLLQ-MDGEQMQPSWS 439


>gi|240948555|ref|ZP_04752928.1| translocation protein TolB precursor [Actinobacillus minor NM305]
 gi|240297063|gb|EER47634.1| translocation protein TolB precursor [Actinobacillus minor NM305]
          Length = 426

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 180/387 (46%), Gaps = 23/387 (5%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           V+++VS DL+ S  F  + +     +  +   +   Q W  +G  ++V G+V   G    
Sbjct: 55  VAQIVSDDLRNSGKFAPVERSKLPAQPGSAGEVVS-QQWTDIGVDMVVVGQVTPAGGGYY 113

Query: 125 RVEFRLWDV-KDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L DV  +   ++ +  F  PA+  R+ AHT+SD +++ IT  +G F ++I +V  
Sbjct: 114 NVAYQLVDVLSNPAAVLTEGAFKVPAAQIRQGAHTVSDQVFEKITQIRGAFRTKIAYV-- 171

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V  G+    L V D DG N   +  S++  L  P +SP   K+AY T++++   +V + 
Sbjct: 172 -VQRGVSSYELRVSDYDGFNAFTVVQSKEP-LMSPEWSPEGSKLAYVTFENKK-PQVVVH 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D R   A + +   +    AP FS +G +   +  +D  ++IY V        +LT    
Sbjct: 229 DLR-SGARRVVAALKGHNGAPAFSPDGSKIAFASNQDGELNIYVVGANGGTPSKLTANAG 287

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N   S+SPD   I F SDR G  Q+Y M S+G     +   K    ++   S  G   +
Sbjct: 288 NNTEPSWSPDGGSIYFTSDRSGSPQVYRMSSSGGGVSAVGGGKT---YNAKMSSDGK--S 342

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               +G+K    V+K+D +     V  S    ++P+ SP+G  +I+S  K   TG  L  
Sbjct: 343 LIMIAGDK----VVKQDLAAGSTEVLSSTFLDESPSISPNGIMVIYSSTK--GTGKVLQL 396

Query: 421 IDLNGR-NETLINTPAYASDPQWVGFM 446
           +  +GR    L  T      P W  ++
Sbjct: 397 VSADGRFKANLPGTGGQYKFPAWSPYL 423


>gi|195939092|ref|ZP_03084474.1| translocation protein TolB [Escherichia coli O157:H7 str. EC4024]
          Length = 389

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 160/330 (48%), Gaps = 25/330 (7%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++  +S   S   I    F       + +++GG    +V+ DL+ S  FN + + 
Sbjct: 19  LHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGG----IVAADLRNSGKFNPLDRA 74

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 75  RLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQ 131

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     W R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 132 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 190

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 191 N-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 247

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD
Sbjct: 248 APAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSD 307

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA 347
           + G+ Q+Y +  NG   +RI    SQ+++A
Sbjct: 308 QAGRPQVYKVNINGGAPQRITWEGSQNQDA 337



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 6/123 (4%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +S ++SPD S++ + +   G+  L +   +NG+ ++  S  +      P +SP G  +AF
Sbjct: 203 MSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGA--PAFSPDGSKLAF 260

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    + VM     Q R + +  SN   PTW P  ++L F+  + G    ++Y ++
Sbjct: 261 ALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGR--PQVYKVN 318

Query: 423 LNG 425
           +NG
Sbjct: 319 ING 321


>gi|10120890|pdb|1CRZ|A Chain A, Crystal Structure Of The E. Coli Tolb Protein
          Length = 403

 Score =  119 bits (299), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 169/382 (44%), Gaps = 54/382 (14%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKD 122
           +  +V+ DL+ S  FN + +    Q+   P S    Q   W++LG   +V G+V      
Sbjct: 27  IGGIVAADLRNSGKFNPLDRARLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDG 83

Query: 123 RLRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFV 180
              V ++L D       ++ +  +     W R   HT SD++++ +TG KG F +RI +V
Sbjct: 84  SYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYV 143

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            ++   G     L V D DG N +++     Q L  P +SP+  K+AY T+  E      
Sbjct: 144 VQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLXSPAWSPDGSKLAYVTF--ESGRSAL 199

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           ++ T  + A +++ +F     AP FS +G +   ++ K  ++++Y  DL S    ++T+ 
Sbjct: 200 VIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVXDLASGQIRQVTDG 259

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEA--------- 347
              N   ++ PDS  + F SD+ G+ Q+Y +  NG   +RI    SQ+++A         
Sbjct: 260 RSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFX 319

Query: 348 ---------------------------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                                      ++ D  P  +P G  + ++   G    + ++  
Sbjct: 320 VXVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTXVIYSSSQGXGSVLNLVST 379

Query: 379 DGS-QERLLVEDSNLQAPTWSP 399
           DG  + RL   D  ++ P WSP
Sbjct: 380 DGRFKARLPATDGQVKFPAWSP 401


>gi|300715889|ref|YP_003740692.1| protein TolB (translocation of group A colicins) [Erwinia
           billingiae Eb661]
 gi|299061725|emb|CAX58841.1| Protein TolB (Translocation of group A colicins) [Erwinia
           billingiae Eb661]
          Length = 430

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 103/440 (23%), Positives = 191/440 (43%), Gaps = 59/440 (13%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVA-TNSANYS-PVSIAFTKFVSIDELGGK 64
           + +   + ++  LL V +        HA V++  T   N + P+ +   K+         
Sbjct: 1   MKQAFRVAMSFLLLFVAVA-------HAEVRIEITQGVNTARPIGVVPFKWAGPGAAPED 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V+ DL+ S  FN + +    Q+ T    + +   W +LG   +V G+V        
Sbjct: 54  IGGIVAADLRNSGKFNPLDRSRLPQQPTTAAEV-QPAAWTALGIDAVVVGQVQPGADGSY 112

Query: 125 RVEFRLWDVK-DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D   +   I+ +  +     W R  AHT SD+ ++ +TG KG F +RI +V +
Sbjct: 113 LVSYQLVDTSGNPGAILAQNQYKVTKQWLRYAAHTASDEAFEKLTGIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G     L V D DG N   +  S  Q L  P +S +  K+AY T+  E      ++
Sbjct: 173 TN-GGQFPYELRVSDYDGYNQNTVHRS-PQPLMSPAWSKDGSKLAYVTF--ESGKSALVV 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A K++ +F     AP FS +G +   ++ K  ++++Y +DL S    +LT+  +
Sbjct: 229 QTLANGAIKQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQINQLTDGRY 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------QDKEAS-------- 348
            +   ++ PDS  + + SD+ G+ Q+Y + ++G   +R++      QD + S        
Sbjct: 289 NSTEPTWFPDSQSLAYTSDQAGRPQIYKISASGGTAQRLTWEGGQNQDADVSSDGKSLVM 348

Query: 349 --------------------------YFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                                     + D  P  +P G ++ ++   G    + ++  DG
Sbjct: 349 ISTNGGAQHVARQDLETGAVQQLTDTFLDETPSLAPNGTMVIYSSTQGMGSVLQLVSTDG 408

Query: 381 S-QERLLVEDSNLQAPTWSP 399
             + RL   D  ++ P WSP
Sbjct: 409 RFKARLPATDGQVKFPAWSP 428


>gi|251793058|ref|YP_003007784.1| translocation protein TolB [Aggregatibacter aphrophilus NJ8700]
 gi|247534451|gb|ACS97697.1| Tol-Pal system beta propeller repeat protein TolB [Aggregatibacter
           aphrophilus NJ8700]
          Length = 426

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 178/391 (45%), Gaps = 44/391 (11%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P+++   K+         +++++S DL+ S  FN +      Q+ T+   +   + W++ 
Sbjct: 38  PIAVVPFKWNGPGSAPADIAKIISDDLRNSGKFNPMEVSKMPQQPTSAAEV-NPEVWSAQ 96

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWD-VKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQ 164
           G + ++ G+V         + ++L D +     I+ +  ++    W R  AHT+SD+ ++
Sbjct: 97  GIEAVIVGQVTPS-NGGFDIAYQLVDTMGSAGSILSQNQYTVTQKWLRYGAHTVSDESFE 155

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +TG KG F +RI +V +    G     + V D DG N +++     Q    P +SP+ +
Sbjct: 156 KLTGIKGAFRTRIAYVVQKN-GGSQPYEVRVSDYDGFN-QFIVNRSSQPFMSPAWSPDGK 213

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           K+AY +++++   ++ L D     A K + +F     AP FS +G R   +  KD  ++I
Sbjct: 214 KLAYVSFENKK-AQIILQDLG-SMARKVVASFPGHNGAPAFSPDGSRLAFASSKDGVLNI 271

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK----- 339
           Y ++L S    +LT+    N   S+SPD   IVF SDR G  Q+Y M ++G         
Sbjct: 272 YVINLGSGQVSQLTSGAGNNTEPSWSPDGQSIVFTSDRGGSPQVYRMSASGGGASLVGGR 331

Query: 340 ---RISQDK-------------------------EASYFD--PVWSPQGDLIAFTKFSGE 369
              +IS D                           +++ D  P  SP G +I ++   G 
Sbjct: 332 GSGQISSDGSTLVMIDGSNNIVKKDLASGSAEVLSSTFLDESPSISPNGIMIIYSSTQGL 391

Query: 370 KFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
              + ++  DG  + RL   D  ++ P WSP
Sbjct: 392 GKVLQLVSADGRFKARLPGNDGQVKFPAWSP 422


>gi|254229963|ref|ZP_04923365.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio sp. Ex25]
 gi|151937532|gb|EDN56388.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio sp. Ex25]
          Length = 450

 Score =  119 bits (298), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 190/430 (44%), Gaps = 46/430 (10%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P+++   K+     L   +S V++ DLQRS  F+ +      Q   +   +  F  W +L
Sbjct: 37  PIAVVPFKWEGTQALPTDISAVIASDLQRSGKFSPVPTSKMPQTPFSESEV-NFDAWTNL 95

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK-----------------FFSSPA 149
           G   L+TG + +  +    + ++L D+  R Q+ G K                  F+  A
Sbjct: 96  GVDALLTGSIKQNAQGDYVINYQLVDIV-RGQLTGGKSKALGSDGELVLSKDHVLFNKVA 154

Query: 150 S-----WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--IKNSLCVMDRDGAN 202
           +      R+ AH ISD +Y+ +TG++G F +RI +V   VV+        L V D DG N
Sbjct: 155 TVQGPRMREYAHRISDLVYEQLTGDRGAFMTRIAYV---VVNDKDRFPYQLRVADYDGYN 211

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDED----ILRVYLMD-TRIDRAPKRIGNFR 257
            R +  S+ Q L  P +SP+ +K+AY ++ +      I+ +Y  +  +I   P+  G   
Sbjct: 212 ERLVLRSK-QPLMSPAWSPDGKKLAYVSFQNGQAEIFIMNIYTGEREKITSYPRHNG--- 267

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               APRFS +G +  I + K  ++ +Y+ DL +    ++T     N    + PD   ++
Sbjct: 268 ----APRFSPDGNKLAIVLSKTGSLHVYTFDLNTRKLTQITRGRSNNTEPFWHPDGKSLI 323

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SDR GK Q+Y +        R++     +    + +P G  +     S   F +    
Sbjct: 324 FTSDRGGKPQIYQVNLGSGSIDRLTWQGSQNLGGQI-TPDGRFLVMVNRSNAGFNLAKQD 382

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAY 436
            +    ++L +    ++P+ +P+G  +++S   +      + SID  GR    L  T   
Sbjct: 383 LETGALQVLTKTLLDESPSIAPNGGMVVYSSIYNKKNVLSMVSID--GRFKARLPATNGR 440

Query: 437 ASDPQWVGFM 446
              P W  F+
Sbjct: 441 VRAPAWSPFL 450


>gi|253687643|ref|YP_003016833.1| Tol-Pal system beta propeller repeat protein TolB [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|259533860|sp|C6DCE7|TOLB_PECCP RecName: Full=Protein tolB; Flags: Precursor
 gi|251754221|gb|ACT12297.1| Tol-Pal system beta propeller repeat protein TolB [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 430

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/418 (23%), Positives = 190/418 (45%), Gaps = 17/418 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +K+ +  L+      +   +HA V++       +  P+ +   K+         V  +V 
Sbjct: 5   LKVAVSFLM-----LWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDVGGIVG 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN I  +   Q+      +     W +LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPIDANRMPQQPATASEVTP-AAWTALGIDAVVVGQVQPSADGSYLVSYQL 118

Query: 131 WDVK-DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D   +   ++ +  F     W R  AHT SD++++ ++G KG F +RI +V ++   G 
Sbjct: 119 VDTSGNPGNVLAQNQFKVTKQWLRYAAHTASDEVFEKLSGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +S +  K+AY T+  E      ++ T  + 
Sbjct: 178 FPYELRVADYDGYN-QFVVHRSPQPLMSPAWSADGSKLAYVTF--ESGRSALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N   +
Sbjct: 235 AIRQVASFPRHNGAPSFSPDGSKLAFALSKSGSLNLYVMNLASGQISQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + + SD+ G+ Q+Y + +NG   +R++ +  A   D   S  G  +     +G
Sbjct: 295 WFPDSQTLAYTSDQAGRPQVYKVNANGGAPQRLTWEG-AQNQDADVSADGKFLVTVGSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               I  +       ++L +    + P+ +P+G  +I+S K+    GS L  +  +GR
Sbjct: 354 GAQHISKLDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSKQ--GLGSVLQLVSTDGR 409


>gi|262394684|ref|YP_003286538.1| TolB protein [Vibrio sp. Ex25]
 gi|262338278|gb|ACY52073.1| TolB protein precursor [Vibrio sp. Ex25]
          Length = 442

 Score =  119 bits (298), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 190/430 (44%), Gaps = 46/430 (10%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P+++   K+     L   +S V++ DLQRS  F+ +      Q   +   +  F  W +L
Sbjct: 29  PIAVVPFKWEGTQALPTDISAVIASDLQRSGKFSPVPTSKMPQTPFSESEV-NFDAWTNL 87

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK-----------------FFSSPA 149
           G   L+TG + +  +    + ++L D+  R Q+ G K                  F+  A
Sbjct: 88  GVDALLTGSIKQNAQGDYVINYQLVDIV-RGQLTGGKSKALGSDGELVLSKDHVLFNKVA 146

Query: 150 S-----WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--IKNSLCVMDRDGAN 202
           +      R+ AH ISD +Y+ +TG++G F +RI +V   VV+        L V D DG N
Sbjct: 147 TVQGPRMREYAHRISDLVYEQLTGDRGAFMTRIAYV---VVNDKDRFPYQLRVADYDGYN 203

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDED----ILRVYLMD-TRIDRAPKRIGNFR 257
            R +  S+ Q L  P +SP+ +K+AY ++ +      I+ +Y  +  +I   P+  G   
Sbjct: 204 ERLVLRSK-QPLMSPAWSPDGKKLAYVSFQNGQAEIFIMNIYTGEREKITSYPRHNG--- 259

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               APRFS +G +  I + K  ++ +Y+ DL +    ++T     N    + PD   ++
Sbjct: 260 ----APRFSPDGNKLAIVLSKTGSLHVYTFDLNTRKLTQITRGRSNNTEPFWHPDGKSLI 315

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SDR GK Q+Y +        R++     +    + +P G  +     S   F +    
Sbjct: 316 FTSDRGGKPQIYQVNLGSGSIDRLTWQGSQNLGGQI-TPDGRFLVMVNRSNAGFNLAKQD 374

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAY 436
            +    ++L +    ++P+ +P+G  +++S   +      + SID  GR    L  T   
Sbjct: 375 LETGALQVLTKTLLDESPSIAPNGGMVVYSSIYNKKNVLSMVSID--GRFKARLPATNGR 432

Query: 437 ASDPQWVGFM 446
              P W  F+
Sbjct: 433 VRAPAWSPFL 442


>gi|269967692|ref|ZP_06181742.1| translocation protein TolB precursor [Vibrio alginolyticus 40B]
 gi|269827779|gb|EEZ82063.1| translocation protein TolB precursor [Vibrio alginolyticus 40B]
          Length = 450

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 190/430 (44%), Gaps = 46/430 (10%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P+++   K+     L   VS V++ DLQRS  F+ +      Q   +   +  F  W +L
Sbjct: 37  PIAVVPFKWEGTQALPTDVSAVIASDLQRSGKFSPVPTSKMPQTPFSESEV-NFDAWTNL 95

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK-----------------FFSSPA 149
           G   L+TG + +  +    + ++L D+  R Q+ G K                  F+  A
Sbjct: 96  GVDALLTGSIKQNDQGDYVINYQLVDIV-RGQLTGGKSKALGSDGELVLSKDHVLFNKVA 154

Query: 150 S-----WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--IKNSLCVMDRDGAN 202
           +      R+ AH ISD +Y+ +TG++G F +RI +V   VV+        L V D DG N
Sbjct: 155 TVQGPRMREYAHRISDLVYEQLTGDRGAFMTRIAYV---VVNDKDRFPYQLRVADYDGYN 211

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDED----ILRVYLMD-TRIDRAPKRIGNFR 257
            R +  S+ Q L  P +SP+ +K+AY ++ +      I+ +Y  +  +I   P+  G   
Sbjct: 212 ERLVLRSK-QPLMSPAWSPDGKKLAYVSFQNGQAEIFIMNIYTGEREKITSYPRHNG--- 267

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               APRFS +G +  I + K  ++ +Y+ DL +    ++T     N    + PD   ++
Sbjct: 268 ----APRFSPDGNKLAIVLSKTGSLHVYTFDLNTRKLTQITRGRSNNTEPFWHPDGKSLI 323

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SDR GK Q+Y +        R++     +    + +P G  +     S   F +    
Sbjct: 324 FTSDRGGKPQIYQVNLGSGSIDRLTWQGSQNLGGQI-TPDGRFLVMVNRSNAGFNLAKQD 382

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAY 436
            +    ++L +    ++P+ +P+G  +++S   +      + SID  GR    L  T   
Sbjct: 383 LETGALQVLTKTLLDESPSIAPNGGMVVYSSIYNKKNVLSMVSID--GRFKARLPATNGR 440

Query: 437 ASDPQWVGFM 446
              P W  F+
Sbjct: 441 VRAPAWSPFL 450


>gi|227327556|ref|ZP_03831580.1| translocation protein TolB [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 430

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/418 (23%), Positives = 190/418 (45%), Gaps = 17/418 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +K+ L  L++     +    HA V++       +  P+ +   K+         V  +V 
Sbjct: 5   LKVALSFLML-----WTAVAHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDVGGIVG 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN I  +   Q+      +     W +LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPIDANRMPQQPATASEVTP-AAWTALGIDAVVVGQVQPSADGSYLVSYQL 118

Query: 131 WDVK-DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D   +   ++ +  F     W R  AHT SD++++ ++G KG F +RI +V ++   G 
Sbjct: 119 VDTSGNPGSVLAQNQFKVTKQWLRYAAHTASDEVFEKLSGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +S +  K+AY T+  E      ++ T  + 
Sbjct: 178 FPYELRVADYDGYN-QFVVHRSPQPLMSPAWSADGSKLAYVTF--ESGRSALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N   +
Sbjct: 235 AIRQVASFPRHNGAPSFSPDGSKLAFALSKSGSLNLYVMNLGSGQISQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + + SD+ G+ Q+Y + +NG   +R++ +   +    V S  G  +     +G
Sbjct: 295 WFPDSQTLAYTSDQAGRPQVYKVNANGGAPQRLTWEGSQNQDSDV-SADGKFLVTVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               I  +       ++L +    + P+ +P+G  +I+S K+    GS L  +  +GR
Sbjct: 354 GAQHISKLDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSKQ--GLGSVLQLVSTDGR 409


>gi|91227604|ref|ZP_01261908.1| translocation protein TolB precursor [Vibrio alginolyticus 12G01]
 gi|91188497|gb|EAS74790.1| translocation protein TolB precursor [Vibrio alginolyticus 12G01]
          Length = 442

 Score =  119 bits (297), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 108/430 (25%), Positives = 190/430 (44%), Gaps = 46/430 (10%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL 106
           P+++   K+     L   VS V++ DLQRS  F+ +      Q   +   +  F  W +L
Sbjct: 29  PIAVVPFKWEGTQALPTDVSAVIASDLQRSGKFSPVPTSKMPQTPFSESEV-NFDAWTNL 87

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK-----------------FFSSPA 149
           G   L+TG + +  +    + ++L D+  R Q+ G K                  F+  A
Sbjct: 88  GVDALLTGSIKQNDQGDYVINYQLVDIV-RGQLTGGKSKALGSDGELVLSKDHVLFNKVA 146

Query: 150 S-----WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--IKNSLCVMDRDGAN 202
           +      R+ AH ISD +Y+ +TG++G F +RI +V   VV+        L V D DG N
Sbjct: 147 TVQGPRMREYAHRISDLVYEQLTGDRGAFMTRIAYV---VVNDKDRFPYQLRVADYDGYN 203

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDED----ILRVYLMD-TRIDRAPKRIGNFR 257
            R +  S+ Q L  P +SP+ +K+AY ++ +      I+ +Y  +  +I   P+  G   
Sbjct: 204 ERLVLRSK-QPLMSPAWSPDGKKLAYVSFQNGQAEIFIMNIYTGEREKITSYPRHNG--- 259

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               APRFS +G +  I + K  ++ +Y+ DL +    ++T     N    + PD   ++
Sbjct: 260 ----APRFSPDGNKLAIVLSKTGSLHVYTFDLNTRKLTQITRGRSNNTEPFWHPDGKSLI 315

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SDR GK Q+Y +        R++     +    + +P G  +     S   F +    
Sbjct: 316 FTSDRGGKPQIYQVNLGSGSIDRLTWQGSQNLGGQI-TPDGRFLVMVNRSNAGFNLAKQD 374

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAY 436
            +    ++L +    ++P+ +P+G  +++S   +      + SID  GR    L  T   
Sbjct: 375 LETGALQVLTKTLLDESPSIAPNGGMVVYSSIYNKKNVLSMVSID--GRFKARLPATNGR 432

Query: 437 ASDPQWVGFM 446
              P W  F+
Sbjct: 433 VRAPAWSPFL 442


>gi|332534221|ref|ZP_08410066.1| TolB protein precursor [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036301|gb|EGI72772.1| TolB protein precursor [Pseudoalteromonas haloplanktis ANT/505]
          Length = 389

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 169/372 (45%), Gaps = 83/372 (22%)

Query: 100 FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG------------------ 141
           +  W + G + ++ G V ++   R  V + L DV  R QI G                  
Sbjct: 26  YASWVNKGVEAVLVGEVEQQTDGRYLVRYELVDVI-RGQITGGNTQMMSNGKLVKSQDHI 84

Query: 142 ---KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS------ 192
              ++     + +R+ +H ISD IY+ +TGEKG F ++I +V       I++++      
Sbjct: 85  LEARESVIGESGFRRYSHRISDVIYEKLTGEKGAFLTKIAYV-------IVRDNEPKPYQ 137

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V D DG N + L  S++  L  P +SPN  K+AY T+++    ++Y+ D    +  + 
Sbjct: 138 LVVADYDGFNEQVLLRSKEP-LMSPAWSPNGTKLAYVTFENRQS-QIYIQDIYTGKR-EI 194

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYS 310
           I ++R +  AP+FS +GK+ L+ + KD+  A ++Y +DL +    RLTN   I+   S+ 
Sbjct: 195 IASYRGINGAPQFSPDGKKLLLVLSKDKTGATEVYMLDLATRKETRLTNHRSIDTEPSWY 254

Query: 311 PDSSQIVFESDREGKEQLY-------------------------------VMQSNGSDQK 339
           P+   IVF S+R G  Q+Y                               VM +  + Q 
Sbjct: 255 PNGQDIVFTSERGGNAQIYKLNLKTGRSQRLTFDGDMNLAGSITPDGKELVMVNRTNGQY 314

Query: 340 RISQDKEASYF-----------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLV 387
            +++ + A+              P  +P G +I ++     K  + ++  DG  + RL V
Sbjct: 315 HLAKKELATGAFQVLTRTRLDESPSIAPNGSMIIYSTLHNNKQVLALVSMDGRFKARLPV 374

Query: 388 EDSNLQAPTWSP 399
            D  ++AP WSP
Sbjct: 375 LDGQVKAPAWSP 386



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 3/118 (2%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           QL V   +G +++ + + KE     P WSP G  +A+  F   +  I +      +  ++
Sbjct: 137 QLVVADYDGFNEQVLLRSKEP-LMSPAWSPNGTKLAYVTFENRQSQIYIQDIYTGKREII 195

Query: 387 VEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQW 442
                +  AP +SP G+ L+    KD    +++Y +DL  R ET L N  +  ++P W
Sbjct: 196 ASYRGINGAPQFSPDGKKLLLVLSKDKTGATEVYMLDLATRKETRLTNHRSIDTEPSW 253


>gi|189500640|ref|YP_001960110.1| WD40 domain-containing protein beta Propeller [Chlorobium
           phaeobacteroides BS1]
 gi|189496081|gb|ACE04629.1| WD40 domain protein beta Propeller [Chlorobium phaeobacteroides
           BS1]
          Length = 444

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 200/458 (43%), Gaps = 58/458 (12%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID-----ELGGKVSEVV 69
           I LC   ++    F   +  ++K+    A+  P+ +   + V ++     +    +  V+
Sbjct: 17  ILLCCFALMPSSLFGEPVKEYIKITKAGADRIPLVL---RSVDVERSKDAQYANGIDRVI 73

Query: 70  SKDLQRSDVF-------NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
              L+ S +F       NLIS  +  Q  T    I  F   +S+GA+V   G V+K   +
Sbjct: 74  KNGLEFSGLFAILNSPMNLISGGNIYQ--TGKRQI-NFPALSSVGAEVYAGG-VLKRKGN 129

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            L ++  ++D    K ++ K +       R + H   DD+ +  TG+   F S+I +VS 
Sbjct: 130 TLHMDMEVYDALTGKLLMRKLYEGKREDTRSLGHRFCDDLVRLFTGKPSIFGSKIAYVSR 189

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY----------- 231
              +G  K  + + D DG     +T +   +   P  S +  ++AY TY           
Sbjct: 190 R--NG--KKEIYLADFDGYGEVPVTRT-GGLALTPALSSDGSQLAYLTYTRGRPDLQIKD 244

Query: 232 -DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              + ++ V     +ID A ++     S  LA  FS +G +           +IY V   
Sbjct: 245 LSKKTVVSVTRKGVKIDPAWRK----GSTELATTFSFDGNQ-----------EIYLVRKN 289

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            +   RLT    I++S S+SPD   + F S R G  Q+++M  N    KR++   + +  
Sbjct: 290 GSIVRRLTRDRGIDLSPSFSPDGRYMAFVSSRHGLPQVFIMDLNSGSTKRLTFKGKYNT- 348

Query: 351 DPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFS 407
            P WSP  D IAFT    +GE   I  +  DG+  ++L       +AP+WSP G  ++FS
Sbjct: 349 QPAWSPVNDKIAFTTMQKNGE-IDIFTVNADGTGLKQLTYRARQNEAPSWSPDGTMIVFS 407

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
             + G   SKLY ++ +GRN+  +        P W  F
Sbjct: 408 SSRGG--ASKLYVMNADGRNQRSLKLAGEQMQPCWSSF 443


>gi|50120312|ref|YP_049479.1| translocation protein TolB [Pectobacterium atrosepticum SCRI1043]
 gi|67461950|sp|Q6D7F2|TOLB_ERWCT RecName: Full=Protein tolB; Flags: Precursor
 gi|49610838|emb|CAG74283.1| TolB protein [Pectobacterium atrosepticum SCRI1043]
          Length = 430

 Score =  118 bits (296), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/418 (23%), Positives = 189/418 (45%), Gaps = 17/418 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +K+ +  L+      +   +HA V++       +  P+ +   K+         V  +V 
Sbjct: 5   LKVAVSFLM-----LWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDVGAIVG 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN I  +   Q+      +     W +LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPIDANRMPQQPATASEVTP-AAWTALGIDAVVVGQVQPSADGSYLVSYQL 118

Query: 131 WDVK-DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D   +   ++ +  F     W R  AHT SD++++ ++G KG F +RI +V ++   G 
Sbjct: 119 VDTSGNPGNVLAQNQFKVTKQWLRYAAHTASDEVFEKLSGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +S +  K+AY T+  E      ++ T  + 
Sbjct: 178 FPYELRVADYDGYN-QFVVHRSPQPLMSPAWSADGSKLAYVTF--ESGRSALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y ++L S     +T+    N   +
Sbjct: 235 AIRQVASFPRHNGAPSFSPDGSKLAFALSKSGSLNLYVMNLGSGQISPVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + + SD+ G+ Q+Y + +NG   +R++ +   +    V S  G  +     +G
Sbjct: 295 WFPDSQTLAYTSDQAGRPQVYKVNANGGAPQRVTWEGSQNQDSDV-SADGKFLVTVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               I  +       ++L +    + P+ +P+G  +I+S K+    GS L  +  +GR
Sbjct: 354 GAQHISKLDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSKQ--GLGSVLQLVSTDGR 409


>gi|238756016|ref|ZP_04617340.1| hypothetical protein yruck0001_31470 [Yersinia ruckeri ATCC 29473]
 gi|238705741|gb|EEP98134.1| hypothetical protein yruck0001_31470 [Yersinia ruckeri ATCC 29473]
          Length = 413

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 185/403 (45%), Gaps = 20/403 (4%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K++       ++  +V+ DL+ S  FN I      Q
Sbjct: 2   LHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEEIGSIVAADLRNSGKFNPIDVARMPQ 61

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           + +    +     W +LG   +V G+V         V ++L D       I+ +  +   
Sbjct: 62  QPSTAAEV-TPAAWTALGIDAVVVGQVQPGADGSYLVSYQLVDTAGAAGSILAQNQYKIT 120

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R  AHT SD++++ +TG KG F +RI +V ++   G   + L V D DG N +++ 
Sbjct: 121 KQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGKFPHELRVSDYDGYN-QFVV 178

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               + L  P +S +  K+AY T+  E      ++ T  + A K++ +F     AP FS 
Sbjct: 179 HRSPEPLMSPAWSADGSKIAYVTF--ESGKSALVIQTLANGAIKQVASFPRHNGAPAFSP 236

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y ++L S    ++T+    N   S+ PDS  + + SD+ G+ Q
Sbjct: 237 DGTKLAFALSKSGSLNLYVMNLASGQISQVTDGRSNNTEPSWFPDSQNLAYTSDQGGRPQ 296

Query: 328 LYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +Y +  NG   +RI    SQ++ A       S  G  +A    S     I     +    
Sbjct: 297 VYKVNINGGAPQRITWEGSQNQNADV-----SADGKFLALVSSSSGSQHIAKQDLETGAV 351

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           ++L +    + P+ +P+G  +I+S  +    GS L  +  +GR
Sbjct: 352 QVLTDTFLDETPSIAPNGTMVIYSSTQ--GLGSVLQLVSTDGR 392


>gi|212219431|ref|YP_002306218.1| TolB [Coxiella burnetii CbuK_Q154]
 gi|212013693|gb|ACJ21073.1| TolB [Coxiella burnetii CbuK_Q154]
          Length = 440

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 162/361 (44%), Gaps = 8/361 (2%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           + +V+  DLQ S  F +    +  Q   + + I  +  W       LV G +   G  R 
Sbjct: 60  IPQVIKNDLQNSGQFRVTGSGNLDQTAASLEQI-DYSYWRKQKVNALVVGAINPLGMRRY 118

Query: 125 RVEFRLWDVKD-RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--S 181
           RV F L +V D   +++ + F  +    R  AH ISD IYQ +TG +G F+++I +V   
Sbjct: 119 RVAFTLINVFDSNNRLLSESFNVNAKELRNFAHHISDLIYQKLTGVRGVFSTKIAYVLVQ 178

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            S  +   K +L V D DG N + L  S D  +  P +SP+  K+AY +++      +YL
Sbjct: 179 ASSENTAAKYTLEVADADGFNPQPLLVS-DMPIMSPTWSPDGNKIAYVSFEGHRA-AIYL 236

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    R  +R+     +  AP FS + K+  + + K     IY ++L       +T   
Sbjct: 237 QDLATGRR-QRLSEAPGINGAPAFSPDSKQLALVLTKTGNPKIYILNLADGHLREITKGW 295

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I+   ++SPD   ++F S+R+G  Q+Y          R++   + +   P + P G  I
Sbjct: 296 SIDTEPAWSPDGKSLLFTSNRDGTPQIYNYSFADGSINRVTYRGDYNA-RPSFMPDGKSI 354

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    F I        Q ++L E    ++P+ +P+G+  I++ +  G       SI
Sbjct: 355 IMMHRENGLFGIARQDLSTGQVQILSESGTDESPSLAPNGKMAIYAMEYGGRGVLAQVSI 414

Query: 422 D 422
           D
Sbjct: 415 D 415


>gi|261822330|ref|YP_003260436.1| translocation protein TolB [Pectobacterium wasabiae WPP163]
 gi|261606343|gb|ACX88829.1| Tol-Pal system beta propeller repeat protein TolB [Pectobacterium
           wasabiae WPP163]
          Length = 430

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/418 (23%), Positives = 189/418 (45%), Gaps = 17/418 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +K+ +  L+      +   +HA V++       +  P+ +   K+         V  +V 
Sbjct: 5   LKVAVSFLM-----LWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDVGGIVG 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN I  +   Q+      +     W +LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPIDANRMPQQPATASEVTP-AAWTALGIDAVVVGQVQPSADGSYLVSYQL 118

Query: 131 WDVK-DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D   +   ++ +  F     W R  AHT SD++++ ++G KG F +RI +V ++   G 
Sbjct: 119 VDTSGNPGNVLAQNQFKVTKQWLRYAAHTASDEVFEKLSGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +S +  K+AY T+  E      ++ T  + 
Sbjct: 178 FPYELRVADYDGYN-QFVVHRSPQPLMSPAWSADGSKLAYVTF--ESGRSALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N   +
Sbjct: 235 AIRQVASFPRHNGAPSFSPDGNKLAFALSKSGSLNLYVMNLGSGQISQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + + SD+ G+ Q+Y +  NG   +R++ +   +    V S  G  +     +G
Sbjct: 295 WFPDSQTLAYTSDQAGRPQVYKVNVNGGAPQRVTWEGSQNQDSDV-SADGKFLVTVGSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               I  +       ++L +    + P+ +P+G  +I+S K+    GS L  +  +GR
Sbjct: 354 GAQHISKLDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSKQ--GLGSVLQLVSTDGR 409


>gi|319940885|ref|ZP_08015224.1| tol-Pal system beta propeller repeat protein TolB [Sutterella
           wadsworthensis 3_1_45B]
 gi|319805767|gb|EFW02548.1| tol-Pal system beta propeller repeat protein TolB [Sutterella
           wadsworthensis 3_1_45B]
          Length = 434

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 178/394 (45%), Gaps = 14/394 (3%)

Query: 22  VLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNL 81
           +  G        A +++       + + IA   F          +EV++ DL+RS  F  
Sbjct: 19  IAAGALSACPAFADLRIEITGVGANQIPIAIQPFQGASAAPTDPAEVIAADLERSGAFRR 78

Query: 82  IS--QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
           IS  Q++  + +  P+ +         GA V V G V      R  V    +D    +Q+
Sbjct: 79  ISVTQEASAENLEKPEGL---AAAGKAGAAVYVVGAVQALSDGRWDVRCLFYDAVSGEQL 135

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
                 +     R  AH  +D IY  +TGE   F S+I +V++       +  L + D D
Sbjct: 136 DSIGVSAGKDLLRMAAHRCADRIYTRLTGEGAMFASQIAYVAQLAKR---RYELIIADSD 192

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   R    S + I+  P +SP+ +++AY ++++   + VY+ +    R  +++ NFR  
Sbjct: 193 GGVPRTALQSPEPII-SPTWSPDGRQLAYVSFEERKPI-VYVHELSTGRR-RKVANFRGN 249

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP +S +G+   +++ +D    IY ++   +  +R T +  I+    YS D   I F 
Sbjct: 250 NSAPAWSPDGRELAVALSRDGLTQIYRINADGSGLKRFTQSYGIDTEPVYSKDGRWIYFT 309

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           SDR G  Q+Y     G   +R++    +SY   P  SP G  +A+      ++ + VM  
Sbjct: 310 SDRGGTPQIYRQPVAGGAAERVTFG--SSYAISPDISPDGMRMAYISRIDAEYRLAVMDL 367

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
              Q+ L+   +  ++P+++P+GR L+++ +  G
Sbjct: 368 STGQDMLVTNTNRDESPSFAPNGRFLVYATEVSG 401



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 12/167 (7%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKE 346
           DL   A  R  + ++  ++   +  +SQI + +    +  +L +  S+G   +   Q  E
Sbjct: 145 DLLRMAAHRCADRIYTRLTGEGAMFASQIAYVAQLAKRRYELIIADSDGGVPRTALQSPE 204

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
                P WSP G  +A+  F   K  + V +    + R +     N  AP WSP GR L 
Sbjct: 205 -PIISPTWSPDGRQLAYVSFEERKPIVYVHELSTGRRRKVANFRGNNSAPAWSPDGRELA 263

Query: 406 FSRKKDGDTGSKLYSIDLNG-------RNETLINTPAYASDPQWVGF 445
            +  +DG T  ++Y I+ +G       ++  +   P Y+ D +W+ F
Sbjct: 264 VALSRDGLT--QIYRINADGSGLKRFTQSYGIDTEPVYSKDGRWIYF 308


>gi|296103329|ref|YP_003613475.1| translocation protein TolB [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295057788|gb|ADF62526.1| translocation protein TolB [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 430

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 102/421 (24%), Positives = 183/421 (43%), Gaps = 64/421 (15%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +HA V++       S   I    F       + ++ GG    +V+ DL+ S  FN + + 
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFQWAGPGAAPEDAGG----IVAADLRNSGKFNPLDRS 74

Query: 86  SFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGK 142
              Q+   P S    Q   W++LG   +V G+V         V ++L D       ++ +
Sbjct: 75  RLPQQ---PGSAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAWQLVDTGGAPGTVLAQ 131

Query: 143 KFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +     + R  AH  SD +++ +TG KG F +RI +V ++   G     L V D DG 
Sbjct: 132 NSYKVTKQYLRYAAHAASDAVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGY 190

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N ++L     Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     
Sbjct: 191 N-QFLVKRSSQPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNG 247

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +D+ S    ++T+    N   S+ PDS  + F SD
Sbjct: 248 APSFSPDGSKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTEPSWFPDSQNLAFTSD 307

Query: 322 REGKEQLYVMQSNGSDQKRI----SQDKEA------------------------------ 347
           + G+ Q+Y +  NG   +RI    SQ++ A                              
Sbjct: 308 QAGRPQIYKVNINGGAPQRITWEGSQNQNADVSSDGKFMVMVSSNGGQQHIAKQDLVAGG 367

Query: 348 ------SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWS 398
                 ++ D  P  +P G ++ ++   G    + ++  DG  + R+   D  +++P WS
Sbjct: 368 VQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARIPATDGQVKSPAWS 427

Query: 399 P 399
           P
Sbjct: 428 P 428


>gi|153207184|ref|ZP_01945963.1| TolB protein [Coxiella burnetii 'MSU Goat Q177']
 gi|120576845|gb|EAX33469.1| TolB protein [Coxiella burnetii 'MSU Goat Q177']
          Length = 437

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 162/361 (44%), Gaps = 8/361 (2%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           + +V+  DLQ S  F +    +  Q   + + I  +  W       LV G +   G  R 
Sbjct: 57  IPQVIKNDLQNSGQFRVTGSGNLDQTAASLEQI-DYSYWRKQKVNALVVGAINPLGMRRY 115

Query: 125 RVEFRLWDVKD-RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--S 181
           RV F L +V D   +++ + F  +    R  AH ISD IYQ +TG +G F+++I +V   
Sbjct: 116 RVAFTLINVFDSNNRLLSESFNVNAKELRNFAHHISDLIYQKLTGVRGVFSTKIAYVLVQ 175

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            S  +   K +L V D DG N + L  S D  +  P +SP+  K+AY +++      +YL
Sbjct: 176 ASSENTAAKYTLEVADADGFNPQPLLVS-DMPIMSPTWSPDGNKIAYVSFEGHRA-AIYL 233

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    R  +R+     +  AP FS + K+  + + K     IY ++L       +T   
Sbjct: 234 QDLATGRR-QRLSEAPGINGAPAFSPDSKQLALVLTKTGNPKIYILNLADGHLREITKGW 292

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I+   ++SPD   ++F S+R+G  Q+Y          R++   + +   P + P G  I
Sbjct: 293 SIDTEPAWSPDGKSLLFTSNRDGTPQIYNYSFADGSINRVTYRGDYN-ARPSFMPDGKSI 351

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    F I        Q ++L E    ++P+ +P+G+  I++ +  G       SI
Sbjct: 352 IMMHRENGLFGIARQDLSTGQVQILSESGTDESPSLAPNGKMAIYAMEYGGRGVLAQVSI 411

Query: 422 D 422
           D
Sbjct: 412 D 412


>gi|270263785|ref|ZP_06192054.1| protein TolB, precursor [Serratia odorifera 4Rx13]
 gi|270042669|gb|EFA15764.1| protein TolB, precursor [Serratia odorifera 4Rx13]
          Length = 430

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 180/415 (43%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         + ++V  DL+ S  FN I      Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFKWAGPGTPPEDIGKIVGADLRNSGKFNPIDVARMPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           + T+   +     W +LG   +V G+V         + ++L D       ++ +  +   
Sbjct: 79  QPTSASEVTP-AAWTALGIDAVVVGQVQPGADGGYLISYQLVDTSGSPGTVLAQNQYKVT 137

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R  AHT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++ 
Sbjct: 138 KQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGKFPYELRVADYDGYN-QFVV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               + L  P +SP+  K+AY T+  E      ++ T  + A ++I +F     AP FS 
Sbjct: 196 HRSPEPLMSPAWSPDGSKLAYVTF--ESGRSALVVQTLANGAIRQIASFPRHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G R   ++ K  ++++Y ++L S    ++T+    N   ++ PD   + + SD+ G+ Q
Sbjct: 254 DGSRLAFALSKSGSLNLYVMNLGSGQITQITDGRSNNTEPTWFPDGQSLAYTSDQGGRPQ 313

Query: 328 LYVMQSNGSDQKRIS------QDKEAS--------------------------------- 348
           +Y + ++G   +R++      QD E S                                 
Sbjct: 314 IYKVSASGGASQRLTWEGSQNQDSEVSSDGKFLVMVSSNSGAQHIAKQDLGSGAVQVLTG 373

Query: 349 -YFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
            + D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WSP
Sbjct: 374 TFLDETPSIAPNGTMVIYSSTQGMGSVLQLVSTDGRFKARLPATDGQVKFPAWSP 428


>gi|261493428|ref|ZP_05989953.1| TonB family auxiliary protein TolB [Mannheimia haemolytica serotype
           A2 str. BOVINE]
 gi|261496883|ref|ZP_05993251.1| TonB family auxiliary protein TolB [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261307407|gb|EEY08742.1| TonB family auxiliary protein TolB [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261310922|gb|EEY12100.1| TonB family auxiliary protein TolB [Mannheimia haemolytica serotype
           A2 str. BOVINE]
          Length = 428

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 182/392 (46%), Gaps = 31/392 (7%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF--QDWNSLGAQVLVTGRVIKEGKD 122
           V++++S DL+ S  F  + +    Q    P S        W+++G   +V G+V   G  
Sbjct: 56  VAQIISDDLRNSGKFTPLER---SQMPAQPGSAAEVVADQWSAIGIDNIVVGQVSSTGGG 112

Query: 123 RLRVEFRLWDV----KDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRI 177
              V ++L D          +I +  F  PA+  R+ AHT+SD++++ +T  +G F ++I
Sbjct: 113 -YNVAYQLIDTLGTSGTAGGVIAQGSFIVPAAQIRQGAHTVSDEVFEKLTQIRGAFRTKI 171

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V   V  G+    L V D DG N   +T S++  L  P +SP+  ++AY T++++   
Sbjct: 172 AYV---VQRGVSSYELRVSDYDGFNAFTITTSKEP-LMSPEWSPDGSRLAYVTFENKK-A 226

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +V + D R   A + +   +    AP FS +G R   +  +D  ++IY V        +L
Sbjct: 227 QVVVHDIR-SGARRVVAALKGHNGAPSFSPDGSRIAFASNQDGELNIYVVGSGGGTPSKL 285

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T     N   S+SPD S I F SDR G  Q+Y M S+G     +      SY   V S  
Sbjct: 286 TANAGNNTEPSWSPDGSTIYFTSDRAGSPQVYRMSSSGGGASPMG--GSGSYNAKVSSDG 343

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTG 415
            +LI     +G++    V+K+D +     V  S    ++P+ SP+G  +I+S  K   T 
Sbjct: 344 KNLI---MIAGDR----VVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTK--GTS 394

Query: 416 SKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
             L  +  +GR    L     +   P W  ++
Sbjct: 395 KVLQLVSADGRFKANLPGAGGHYKFPAWSPYL 426


>gi|290474099|ref|YP_003466975.1| outer membrane integrity protein [Xenorhabdus bovienii SS-2004]
 gi|289173408|emb|CBJ80185.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Xenorhabdus bovienii
           SS-2004]
          Length = 419

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 184/396 (46%), Gaps = 13/396 (3%)

Query: 33  HAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
           HA V++       +  P+ +   K+        ++  +++ DL+ S  FN I  +   Q+
Sbjct: 8   HAEVRIEITQGVDSARPIGVVPFKWTGAGNAPEEIGSIIAADLRNSGKFNPIDPNRMPQQ 67

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSPA 149
            +    +     W++LG   ++ G++         V ++L D       ++ +  F    
Sbjct: 68  PSTASEV-TPAAWSALGIDSVIVGQIQPAADGNYLVSYQLVDTAGAPGTVMAQDQFKIEK 126

Query: 150 SW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
            W R  AHT SD +++ +TG KG F +R+ +V +    G     L V D DG N ++   
Sbjct: 127 KWLRHAAHTASDQVFEKLTGIKGAFRTRLAYVVKKSSVGKYPYELRVSDYDGYN-QFTVH 185

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + L  P + P+  ++AY T+  E      ++ T    A +++ +F     AP FS +
Sbjct: 186 RSPEPLMSPAWLPDGSQLAYVTF--ESGRSALVIQTLATTAVRQVASFPRHNGAPAFSPD 243

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G +    + K  ++++Y +DL S    ++T+    N   S+ PD+  +V+ SD+ G+ QL
Sbjct: 244 GTKLAFVLSKTGSLNLYMMDLASGQIRQVTDGRSNNTEPSWMPDNQTLVYTSDQGGRPQL 303

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV 387
           Y +  NG   +R++ +   +    V S    ++  +  SG +    + K+D G+    ++
Sbjct: 304 YKIDINGGAPQRLTWEGSQNQDADVSSDGSFIVMVSSASGSQH---IAKQDLGTGSVQML 360

Query: 388 EDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            D+ L + P+ +P+G  +I+S  +   T  +L S D
Sbjct: 361 TDTFLDETPSIAPNGTMVIYSSTQGLGTVLQLVSTD 396


>gi|307130109|ref|YP_003882125.1| periplasmic protein [Dickeya dadantii 3937]
 gi|32699714|sp|Q934G6|TOLB_DICD3 RecName: Full=Protein tolB; Flags: Precursor
 gi|16116637|emb|CAC82709.1| TolB protein [Erwinia chrysanthemi]
 gi|306527638|gb|ADM97568.1| periplasmic protein [Dickeya dadantii 3937]
          Length = 428

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 205/448 (45%), Gaps = 38/448 (8%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE----V 68
           +KI L  L++     +   +HA V++       S   I    F S    GG V E    +
Sbjct: 5   LKIALSFLML-----WTAVLHAEVRIEITQGVDSARPIGVVPFKST---GGAVPEEIGSI 56

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRV 126
           V+ DL+ S  FN I      Q+   P S        W +LG   ++ G+V +   D   V
Sbjct: 57  VAADLRNSGKFNPIDPSRMPQQ---PGSAAEVTPAAWTALGIDAVIVGQV-QPTADGYMV 112

Query: 127 EFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            ++L D       ++ +  F     W R  AHT SD++++ +TG KG F +RI +V ++ 
Sbjct: 113 SYQLVDTSGSAGSVLAQNQFKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN 172

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G     L V D DG N +++     + L  P +S +  K+AY T+  E      ++ T
Sbjct: 173 -GGQYPYELRVADYDGYN-QFVVHRSPEPLMSPSWSADGSKLAYVTF--ESGRSALVVQT 228

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             +   K++ +F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N
Sbjct: 229 LANGDIKQVASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMNLGSGQISQVTDGRSNN 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              ++ PDS  + + SD+ G+ Q+Y +  NG   +R++ +   +    + S    L+  +
Sbjct: 289 TEPTWFPDSQTLAYTSDQAGRPQIYKIGINGGAPQRLTWEGSQNQDSEISSDGKFLVMVS 348

Query: 365 KFSGEKFAIGVMKKD----GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             SG +    + K+D    G Q   ++ D+ L + P+ +P+G  +I+S K+    GS L 
Sbjct: 349 SNSGAQH---IAKQDLVTGGVQ---VLTDTFLDETPSIAPNGTMVIYSSKQ--GLGSVLQ 400

Query: 420 SIDLNGR-NETLINTPAYASDPQWVGFM 446
            +  +GR    L  T      P W  +M
Sbjct: 401 LVSTDGRFKARLPATDGQVRFPAWSPYM 428


>gi|145636350|ref|ZP_01792019.1| translocation protein TolB precursor [Haemophilus influenzae
           PittHH]
 gi|145270515|gb|EDK10449.1| translocation protein TolB precursor [Haemophilus influenzae
           PittHH]
          Length = 427

 Score =  117 bits (294), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 170/376 (45%), Gaps = 47/376 (12%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G +  
Sbjct: 54  ISKIVADDLRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSG-NGY 111

Query: 125 RVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G    +  ++    W R  AHT+SD++++ ++G +G F +RI +
Sbjct: 112 SITYQLIDTVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLSGIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SPN Q++AY +++++   ++
Sbjct: 172 VVQKN-GGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPNGQRLAYVSFENKK-SQL 228

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D     A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+
Sbjct: 229 VVQDLN-SGARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTS 287

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKEASYF- 350
               N   ++SPD + I+F SDR G  Q+Y M +NG            +IS D +     
Sbjct: 288 GAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDANGGSATVVGGRGSAQISADGKTLVMI 347

Query: 351 --------------------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QE 383
                                      P  SP G +I ++   G    + ++  DG  + 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGRFKA 407

Query: 384 RLLVEDSNLQAPTWSP 399
            L   D  ++ P WSP
Sbjct: 408 SLPGSDGQVKFPAWSP 423


>gi|257465021|ref|ZP_05629392.1| translocation protein TolB [Actinobacillus minor 202]
 gi|257450681|gb|EEV24724.1| translocation protein TolB [Actinobacillus minor 202]
          Length = 425

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 188/433 (43%), Gaps = 57/433 (13%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHA----FVKVATNSANYSPVSIA-FTKFVSIDELGGKV 65
           +N+K  +  +L ++   F   + A     + V    +   P+++  F    S D     V
Sbjct: 1   MNLKSRITSVLGIMALLFSNVVRAESDVVISVDEGVSMAQPIAVVPFKGGASAD-----V 55

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
           +++VS DL+ S  F  + +     +  +   +   Q W  +G  ++V G+V   G     
Sbjct: 56  AQIVSDDLRNSGKFTPVERSKLPAQPGSAGEVVS-QQWTDIGVDMVVVGQVTPAGGG-YN 113

Query: 126 VEFRLWDV-KDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           V ++L DV  +   ++ +  F+ PA+  R+ AHT+SD +++ IT  +G F ++I +V   
Sbjct: 114 VAYQLVDVLSNPAAVLAQGAFNVPAAQIRQGAHTVSDQVFEKITQIRGAFRTKIAYV--- 170

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V  G+    L V D DG N   +  S++  L  P +SP   K+AY T++++   +V + D
Sbjct: 171 VQRGVSSYELRVSDYDGFNAFTVVKSKEP-LMSPEWSPEGSKLAYVTFENKK-PQVVVHD 228

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R   A + +   +    AP FS +G +   +  +D  ++IY VD       +LT     
Sbjct: 229 LR-SGARRVVAALKGHNGAPAFSPDGSKIAFASNQDGELNIYVVDANGGTPSKLTANAGN 287

Query: 304 NISASYSPDSSQIVFESDREGKEQLY--------------------VMQSNGSDQKRISQ 343
           N   S+SPD   I F SDR G  Q+Y                     M S+G     I+ 
Sbjct: 288 NTEPSWSPDGGSIYFTSDRSGSPQVYRMSSSGGGASAVGGGKTYNAKMSSDGKSLIMIAG 347

Query: 344 DK--------------EASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLL 386
           DK               +++ D  P  SP G ++ ++   G    + ++  DG  +  L 
Sbjct: 348 DKVVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKGTSKVLQLVSADGRFKANLP 407

Query: 387 VEDSNLQAPTWSP 399
                 + P WSP
Sbjct: 408 GAGGQYKFPAWSP 420


>gi|194333584|ref|YP_002015444.1| WD40 domain-containing protein beta Propeller [Prosthecochloris
           aestuarii DSM 271]
 gi|194311402|gb|ACF45797.1| WD40 domain protein beta Propeller [Prosthecochloris aestuarii DSM
           271]
          Length = 441

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 165/349 (47%), Gaps = 22/349 (6%)

Query: 100 FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS 159
           F   +S+GA+ L  G V++     + +   ++DV   K ++ K +       R I H   
Sbjct: 105 FPALSSVGAE-LYAGGVMERRGSTINMAMEVYDVLTGKLMLKKLYSGKRDDLRSIGHRFC 163

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            D+ + ITG+   F+SR+ FVS   ++G  K  + + + DG   + +T S   +   P  
Sbjct: 164 ADLMELITGKPSVFDSRLAFVS---LNGG-KKEIFLSEFDGYGAKQVT-STGGMALTPSL 218

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNF--RSMILAPRFSSNGKRALISV 276
           SP+   +AY TY         L D +I D A ++  +   + + + P + +       + 
Sbjct: 219 SPDSGLLAYLTYSGG------LPDLQIKDLATQKTVSVMKKGVKIDPSWRNGTLECATTF 272

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +   +IY VD   +   RLT +  I++S S+SPD  ++ F S R G  Q+++   +  
Sbjct: 273 SFEGDQEIYMVDRNGSVGRRLTRSRGIDVSPSFSPDGRKMAFVSSRHGSPQVFIKDLSSG 332

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNL-Q 393
            + R++   + +   P WSP  D IAFT    +GE   I  +  DGS  R L   +   +
Sbjct: 333 RESRLTFSGKYNT-QPAWSPVDDKIAFTSMQKNGE-INIFTINADGSGLRQLTYRARQNE 390

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           AP WSP G  ++FS  +DG    KL+ ++ NGRN+  +  P     P W
Sbjct: 391 APGWSPDGSMIVFSSTRDGS--RKLFMMNANGRNQRSLKLPGEQMQPSW 437



 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 10/164 (6%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI- 253
           ++DR+G+  R LT SR  I   P FSP+ +K+A+ +       +V++ D    R  +   
Sbjct: 282 MVDRNGSVGRRLTRSRG-IDVSPSFSPDGRKMAFVS-SRHGSPQVFIKDLSSGRESRLTF 339

Query: 254 -GNFRSMILAPRFSS-NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            G + +    P +S  + K A  S+QK+  ++I++++   +   +LT     N +  +SP
Sbjct: 340 SGKYNTQ---PAWSPVDDKIAFTSMQKNGEINIFTINADGSGLRQLTYRARQNEAPGWSP 396

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           D S IVF S R+G  +L++M +NG +Q+ +    E     P WS
Sbjct: 397 DGSMIVFSSTRDGSRKLFMMNANGRNQRSLKLPGEQ--MQPSWS 438


>gi|52424778|ref|YP_087915.1| translocation protein TolB [Mannheimia succiniciproducens MBEL55E]
 gi|67461939|sp|Q65UN0|TOLB_MANSM RecName: Full=Protein tolB; Flags: Precursor
 gi|52306830|gb|AAU37330.1| TolB protein [Mannheimia succiniciproducens MBEL55E]
          Length = 431

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 174/391 (44%), Gaps = 47/391 (12%)

Query: 50  IAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
           IA   F +   +   ++E+V+ DL+ S  FN I      Q+  +   +     W +LG  
Sbjct: 42  IAVVPFKTNGSVPADIAEIVTADLRNSGKFNPIPVSQMPQQPASASEVTP-DAWAALGVD 100

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDV----KDRKQIIGKKFFSSPASW-RKIAHTISDDIYQ 164
            +V G+V   G +   + ++L D          ++ +   +  A W R  AHT+SD++++
Sbjct: 101 AIVVGQVTATG-NGYNIAYQLVDTVGASGGAGAVLAQNSVTVGAKWIRYGAHTVSDEVFE 159

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +T  KG F +RI +V +    G     + V D DG N +++     Q +  P +SP+ +
Sbjct: 160 KLTAIKGAFRTRIAYVVQKN-GGSKPYEIRVADYDGFN-QFIVNRSSQPIMSPAWSPDGK 217

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++AY ++++    ++ + D     A K + +F+    AP FS +G R   +  K+  ++I
Sbjct: 218 RLAYVSFENRK-SQLVVQDLG-SGARKVVASFQGHNGAPAFSPDGSRLAFASNKEGQLNI 275

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG--------- 335
           Y +        +LT+    N   S+SPD S I+F SDR G  Q+Y M S+G         
Sbjct: 276 YVMGANGGQPTQLTSGSGNNTEPSWSPDGSSILFTSDRGGSPQVYRMSSSGGAASPVGGR 335

Query: 336 ------SDQKR----------ISQDKEASYFD----------PVWSPQGDLIAFTKFSGE 369
                 SD K           + QD  +   +          P  SP G +I ++   G 
Sbjct: 336 GSAQISSDGKTLVMINGNNNVVKQDVTSGASEVLSTSFLGESPSLSPNGIMIIYSSTQGL 395

Query: 370 KFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
              + ++  DG  + RL   D  ++ P WSP
Sbjct: 396 GKVLQLVSADGRFKARLPGTDGQVKFPAWSP 426


>gi|37525407|ref|NP_928751.1| translocation protein TolB [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|67461995|sp|Q7N6T6|TOLB_PHOLL RecName: Full=Protein tolB; Flags: Precursor
 gi|36784835|emb|CAE13748.1| TolB protein precursor [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 430

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 184/433 (42%), Gaps = 57/433 (13%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           K+ L +L++ +     T  HA V++       +  P+ +   K+        ++  +V  
Sbjct: 6   KVVLSILMLWV-----TVAHAEVRIEITQGVDSARPIGVVPFKWTGAGNAPEEIGAIVGA 60

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  FN I      Q+ T    +     W++LG   +V G++         + ++L 
Sbjct: 61  DLRNSGKFNPIDISRMPQQPTTTSEVTP-AAWSALGIDAVVVGQIQPSADGGFLISYQLV 119

Query: 132 DVKDRK-QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           D       ++ +  F     W R  AHT SD +++ +TG KG F +R+ ++ ++   G  
Sbjct: 120 DTASAPGTVLAQDQFKVTKQWLRYAAHTASDQVFEKLTGIKGAFRTRLAYIVKTN-GGKY 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L V D DG N ++      + L  P +SP+  K+AY T+  E      ++ T     
Sbjct: 179 PYELRVSDYDGYN-QFTVHRSPEPLMSPAWSPDGAKLAYVTF--ESGRSALVIQTLASGE 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   S+
Sbjct: 236 VRQVASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMDLGSAQIRQITDGRSNNTEPSW 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------QDKEAS--------------- 348
            PD+  +V+ SD+ G+ QLY    NG   +R++      QD + S               
Sbjct: 296 MPDNQTLVYTSDQGGRPQLYKTDINGGAPQRLTWEGTQNQDADVSADGNFVMMVSSESGK 355

Query: 349 -------------------YFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLL 386
                              + D  P  +P G ++ ++   G    + ++  DG  + RL 
Sbjct: 356 QHIAKQDLATGAVQILTDTFLDETPSIAPNGTMVIYSSTQGLGTVLQLVSTDGRFKARLP 415

Query: 387 VEDSNLQAPTWSP 399
             D  ++ P WSP
Sbjct: 416 ATDGQVKFPAWSP 428


>gi|251790482|ref|YP_003005203.1| translocation protein TolB [Dickeya zeae Ech1591]
 gi|247539103|gb|ACT07724.1| Tol-Pal system beta propeller repeat protein TolB [Dickeya zeae
           Ech1591]
          Length = 428

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 201/446 (45%), Gaps = 34/446 (7%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE----V 68
           +KI L  L+      +   +HA V++       S   IA   F S    GG V E    +
Sbjct: 5   LKIALSFLM-----LWTAVLHAEVRIEITQGVDSARPIAVVPFKSA---GGAVPEEIGNI 56

Query: 69  VSKDLQRSDVFNLISQDSFKQKI-TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V+ DL+ S  FN I      Q+  T  +  P    W +LG   ++ G+V +   D   V 
Sbjct: 57  VAADLRNSGKFNPIDPSRMPQQPGTAAEVTP--SAWTALGIDAVIVGQV-QPTADGYLVS 113

Query: 128 FRLWDVK-DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           ++L D   +   ++ +  F     W R  AHT SD++++ ++G KG F +RI +V ++  
Sbjct: 114 YQLVDTSGNAGSVLAQNQFKVTKQWLRYAAHTASDEVFEKLSGIKGAFRTRIAYVVQTN- 172

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G     L V D DG N +++     + L  P +S +  K+AY T+  E      ++ T 
Sbjct: 173 GGQYPYELRVADYDGYN-QFVVHRSPEPLMSPSWSSDGSKLAYVTF--ESGRSALVVQTL 229

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +   ++I +F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N 
Sbjct: 230 ANGDIRQIASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMNLGSGQISQVTDGRSNNT 289

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLI 361
             ++ PDS  + + SD+ G+ Q+Y +  NG   +R+    SQ+++A       S  G  +
Sbjct: 290 EPTWLPDSQTLAYTSDQAGRPQIYKVGINGGAPQRLTWEGSQNQDAEI-----SSDGKFL 344

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                +G    I          ++L +    + P+ +P+G  +I+S K+    GS L  +
Sbjct: 345 VMVSSNGGAQHIAKQDLVTGGVQVLTDTFLDETPSIAPNGTMVIYSSKQ--GLGSVLQLV 402

Query: 422 DLNGR-NETLINTPAYASDPQWVGFM 446
             +GR    L  T      P W  +M
Sbjct: 403 STDGRFKARLPATDGQVRFPAWSPYM 428


>gi|21673468|ref|NP_661533.1| TolB protein, putative [Chlorobium tepidum TLS]
 gi|32699704|sp|Q8KEQ0|TOLB_CHLTE RecName: Full=Protein tolB; Flags: Precursor
 gi|21646573|gb|AAM71875.1| tolB protein, putative [Chlorobium tepidum TLS]
          Length = 434

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 195/442 (44%), Gaps = 38/442 (8%)

Query: 18  CLLLVLIGGFF-PTSIHA---FVKVATNSANYSPVSIAFTKFVSIDELGGKVSE------ 67
           CL ++L G  F P ++ A      +A      S +++   K  S D  GGK  E      
Sbjct: 10  CLCIMLFGMLFVPFTLRAEEVGEYIAIRKEGASRIAVVLDK-TSAD--GGKQREWARSLD 66

Query: 68  -VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
             ++K L  + +FNL+      +   N      F    S+G  +   G V K    R  +
Sbjct: 67  VTINKGLDFTGLFNLLPAPLNIRNGQNGGL--NFASIASVGGDIYAGGSVTKR-SGRPVL 123

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E  ++D    K ++ + +    +  R I      D+ + +TG++  F +RI+FV+    +
Sbjct: 124 EMHVYD-SSGKSLLARTYTGEESQLRAIGLRFCADLVELLTGKRSVFGTRIVFVANR--T 180

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G  +  +C  D DG N+  LT SR  I   P  SP+   +A+  Y      +  L    I
Sbjct: 181 GNKEIYMC--DFDGENVVQLTNSRS-ISLTPAVSPDGTYIAWTDYTSG---KPNLYIKNI 234

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               K   N   + ++P +       + ++  +   D+Y +        RLT    I++S
Sbjct: 235 ATGAKVSVNKHGVCISPAWRPGTNTLVTTLSYEGDQDLYLIRADGTVERRLTKGGGIDVS 294

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPD S++ F S R+G  Q+++   N    +R++     +   P WSP GD I ++  
Sbjct: 295 PTFSPDGSKMAFVSTRQGGPQIFIQDMNSGQVRRLTYSGIYNT-QPSWSPNGDKILYSSM 353

Query: 367 --SGE--KFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             SGE   F+I V   DGS    L   S N + P+WSP G  ++FS  +DG    +LY +
Sbjct: 354 QKSGEINIFSINV---DGSGLLQLTSGSGNNEHPSWSPDGSMIVFSSTRDGR--RRLYVM 408

Query: 422 DLNGRNE-TLINTPAYASDPQW 442
           + +G N+  L+N       P W
Sbjct: 409 NADGSNQRPLLNMQGEQQQPSW 430



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 86/164 (52%), Gaps = 5/164 (3%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L ++  DG   R LT     I   P FSP+  K+A+ +   +   ++++ D    +  +R
Sbjct: 272 LYLIRADGTVERRLTKG-GGIDVSPTFSPDGSKMAFVS-TRQGGPQIFIQDMNSGQV-RR 328

Query: 253 IGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +         P +S NG + L S +QK   ++I+S+++  +   +LT+    N   S+SP
Sbjct: 329 LTYSGIYNTQPSWSPNGDKILYSSMQKSGEINIFSINVDGSGLLQLTSGSGNNEHPSWSP 388

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           D S IVF S R+G+ +LYVM ++GS+Q+ +  + +     P WS
Sbjct: 389 DGSMIVFSSTRDGRRRLYVMNADGSNQRPL-LNMQGEQQQPSWS 431


>gi|254362584|ref|ZP_04978681.1| TonB family auxiliary protein TolB [Mannheimia haemolytica PHL213]
 gi|153094190|gb|EDN75077.1| TonB family auxiliary protein TolB [Mannheimia haemolytica PHL213]
          Length = 396

 Score =  117 bits (292), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 170/355 (47%), Gaps = 28/355 (7%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF--QDWNSLGAQVLVTGRVIKEGKD 122
           V++++S DL+ S  F  + +    Q    P S        W+++G   +V G+V   G  
Sbjct: 56  VAQIISDDLRNSGKFTPLER---SQMPAQPGSAAEVVADQWSAIGIDNIVVGQVSSTGGG 112

Query: 123 RLRVEFRLWDV----KDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRI 177
              V ++L D          +I +  F  PA+  R+ AHT+SD++++ +T  +G F ++I
Sbjct: 113 -YNVAYQLIDTLGTSGTAGGVIAQGSFIVPAAQIRQGAHTVSDEVFEKLTQIRGAFRTKI 171

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V   V  G+    L V D DG N   +T S++  L  P +SP+  ++AY T++++   
Sbjct: 172 AYV---VQRGVSSYELRVSDYDGFNAFTITTSKEP-LMSPEWSPDGSRLAYVTFENKK-A 226

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +V + D R   A + +   +    AP FS +G R   +  +D  ++IY V        +L
Sbjct: 227 QVVVHDIR-SGARRVVAALKGHNGAPSFSPDGSRIAFASNQDGELNIYVVGSGGGTPSKL 285

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T     N   S+SPD S I F SDR G  Q+Y M S+G     +      SY   V S  
Sbjct: 286 TANAGNNTEPSWSPDGSTIYFTSDRAGSPQVYRMSSSGGGASPMG--GSGSYNAKVSSDG 343

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKK 410
            +LI     +G++    V+K+D +     V  S    ++P+ SP+G  +I+S  K
Sbjct: 344 KNLI---MIAGDR----VVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTK 391



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 2/109 (1%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF- 363
           +S  +SPD S++ + +    K Q+ V     S  +R+    +     P +SP G  IAF 
Sbjct: 205 MSPEWSPDGSRLAYVTFENKKAQVVVHDIR-SGARRVVAALKGHNGAPSFSPDGSRIAFA 263

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           +   GE     V    G+  +L     N   P+WSP G ++ F+  + G
Sbjct: 264 SNQDGELNIYVVGSGGGTPSKLTANAGNNTEPSWSPDGSTIYFTSDRAG 312



 Score = 39.7 bits (91), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 5/118 (4%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERL 385
           +L V   +G +   I+  KE     P WSP G  +A+  F  +K  + V   + G++  +
Sbjct: 183 ELRVSDYDGFNAFTITTSKEP-LMSPEWSPDGSRLAYVTFENKKAQVVVHDIRSGARRVV 241

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQW 442
                +  AP++SP G  + F+  +DG+    +Y +   G   + L       ++P W
Sbjct: 242 AALKGHNGAPSFSPDGSRIAFASNQDGEL--NIYVVGSGGGTPSKLTANAGNNTEPSW 297


>gi|157369522|ref|YP_001477511.1| translocation protein TolB [Serratia proteamaculans 568]
 gi|166988079|sp|A8GB93|TOLB_SERP5 RecName: Full=Protein tolB; Flags: Precursor
 gi|157321286|gb|ABV40383.1| Tol-Pal system beta propeller repeat TolB [Serratia proteamaculans
           568]
          Length = 430

 Score =  116 bits (291), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/415 (23%), Positives = 178/415 (42%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         + ++V  DL+ S  FN I      Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFKWAGPGTPPEDIGKIVGADLRNSGKFNPIDVARMPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           + T    +     W +LG   +V G+V         + ++L D       ++ +  +   
Sbjct: 79  QPTTASEVTP-AAWTALGIDAVVVGQVQPGADGGYLISYQLVDTSGSPGTVLAQNQYKVT 137

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R  AHT SD++++ +TG KG F +RI +V ++   G     L V D DG N ++  
Sbjct: 138 KQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGKFPYELRVADYDGYN-QFTV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               + L  P +SP+  K+AY T+  E      ++ T  + A ++I +F     AP FS 
Sbjct: 196 HRSPEPLMSPAWSPDGSKLAYVTF--ESGRSALVVQTLANGAIRQIASFPRHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G R   ++ K  ++++Y ++L S    ++T+    N   ++ PD   + + SD+ G+ Q
Sbjct: 254 DGSRLAFALSKSGSLNLYVMNLGSGQITQITDGRSNNTEPTWFPDGQSLAYTSDQGGRPQ 313

Query: 328 LYVMQSNGSDQKRIS------QDKEAS--------------------------------- 348
           +Y + ++G   +R++      QD E S                                 
Sbjct: 314 IYKVSASGGASQRLTWEGSQNQDSEVSSDGKFLVMVSSNSGAQHIAKQDLGSGAVQVLTG 373

Query: 349 -YFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
            + D  P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WSP
Sbjct: 374 TFLDETPSIAPNGTMVIYSSTQGMGSVLQLVSTDGRFKARLPATDGQVKFPAWSP 428


>gi|33152785|ref|NP_874138.1| colicin tolerance protein [Haemophilus ducreyi 35000HP]
 gi|67462000|sp|Q7VKU3|TOLB_HAEDU RecName: Full=Protein tolB; Flags: Precursor
 gi|33149009|gb|AAP96527.1| colicin tolerance protein [Haemophilus ducreyi 35000HP]
          Length = 426

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 186/385 (48%), Gaps = 29/385 (7%)

Query: 48  VSIAFTKFVSIDELGGKVSE----VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF--Q 101
           VSIA    V   ++ G VSE    VV+ DL+ S  F  I +       ++P S+     Q
Sbjct: 36  VSIAQPIAVVPFKVNGGVSEDVGQVVADDLRNSGKFTPIQRAKLP---SHPASVAEINSQ 92

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD-VKDRKQIIGKKFFSSPAS-WRKIAHTIS 159
            W  +G  V+V G+ I    +   V ++L D + +   ++ +  F+ PA+  R+ AHT+S
Sbjct: 93  QWTDIGVDVVVVGQ-ITPANNGYNVAYQLVDTLSNPAVVLVQGSFNVPATQMRQAAHTVS 151

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D I++ +T  +G F ++I +V   V  G+    L V D DG N   +  S++  L  P +
Sbjct: 152 DQIFEKLTQIRGAFRTKIAYV---VQRGVSAYELRVADYDGFNAFTVVKSKEP-LMSPEW 207

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN  K+AY T++++   ++ + D R  +    +   +    AP FS +G R   +  +D
Sbjct: 208 SPNGSKLAYVTFENKR-PQIVVHDLRSGQR-SVVAALKGHNGAPAFSPDGSRLAFASNQD 265

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             ++IY  ++      +LT  +  N   S+SPD S I F SDR G  Q+Y M S+G+D  
Sbjct: 266 GELNIYIANINGGTPIKLTANVGNNTEPSWSPDGSIIYFTSDRAGSPQVYRMSSSGNDVI 325

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTW 397
            I      SY     S   +LI     +G+     V+K+D +     V  S    ++P+ 
Sbjct: 326 PIG--TRGSYNAKASSDGKNLI---MIAGDN----VVKQDLTSGSTEVLSSTFLDESPSI 376

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSID 422
           SP+G  +I+S  K      +L S D
Sbjct: 377 SPNGIMIIYSSTKGTSKVLQLVSAD 401


>gi|1685080|gb|AAC44597.1| TolB [Haemophilus influenzae]
          Length = 427

 Score =  116 bits (290), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 173/377 (45%), Gaps = 49/377 (12%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G +  
Sbjct: 54  ISKIVADDLRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSG-NGY 111

Query: 125 RVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G    +  ++    W R  AHT+SD++++ +TG +G F +RI +
Sbjct: 112 SITYQLIDTVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTGIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++   + 
Sbjct: 172 VVQKN-GGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENK---KS 226

Query: 240 YLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            L+   ++   +++  +F+    AP FS +G R   +  +D  ++IY +        +LT
Sbjct: 227 QLVVQDLNSGTRKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLT 286

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKE---- 346
           +    N   ++SPD + I+F SDR G  Q+Y M +NG            +IS D +    
Sbjct: 287 SGAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDANGGSVTSVGGRGSAQISADGKTLVM 346

Query: 347 ---------------------ASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-Q 382
                                 S+    P  SP G +I ++   G    + ++  DG  +
Sbjct: 347 INGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGRFK 406

Query: 383 ERLLVEDSNLQAPTWSP 399
             L   D  ++ P WSP
Sbjct: 407 ASLPGSDGQVKFPAWSP 423


>gi|94967623|ref|YP_589671.1| TolB-like protein [Candidatus Koribacter versatilis Ellin345]
 gi|94549673|gb|ABF39597.1| TolB-like protein [Candidatus Koribacter versatilis Ellin345]
          Length = 438

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 201/442 (45%), Gaps = 36/442 (8%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS---IDELGGKVSEVVSKDLQRSD 77
           L+LI     T+   ++K  TN      V +A   F +    + L     + +  DL ++ 
Sbjct: 10  LLLIASLPLTAQTDWIKTGTN-LGVEKVRLAVPDFKAGQGSESLSAAFDQTLWNDLYQAG 68

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSL--GAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           +F+L+S+     +     S      W +    A +L  G  I    + + V+  L+DVK+
Sbjct: 69  LFDLVSKSFNPTQAPGQPSEVELNTWGAPPPNASMLAFGN-INVANNEVTVQGWLYDVKN 127

Query: 136 RK--QIIGKKFFSSPA--SWRKIAHTISDDI-YQSITGEKGDFNSRILFVSESVVSGIIK 190
            +  Q++GK++ +     + R IAH  +D+I ++   G +G   S+I F+S         
Sbjct: 128 PQTPQVLGKQYKNGATVENTRLIAHKFADEIIFRLGGGIQGIAESKIYFISTRTG----H 183

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             +  MD DG+N + +T     I+  PR SP+  +VAY+   +   + +Y   T + R+ 
Sbjct: 184 KEIWAMDYDGSNQKPIT-HLGSIVLSPRASPDGARVAYSWMTNGWEIGIY--STELGRSV 240

Query: 251 K--RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              R+G   S   AP FS +G R   S  +    +IY+ D+     +RLTN    + S +
Sbjct: 241 NFARLGGTNS---APAFSGDGNRLAFSSSRSGDPEIYTSDISGANLKRLTNVKGPDTSPT 297

Query: 309 YSPDS-SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTK 365
           ++P + +QI F S R G  Q+Y M  +GS+  +++    A    P WSP G  +  A+T+
Sbjct: 298 WNPKTNAQIAFVSGRTGLPQIYTMDVDGSNVIKMTDQGYA--ISPSWSPNGQFLVFAWTR 355

Query: 366 FSGEKFA----IGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G        I +M     Q   L  D      P+W+P GR ++F   + G    +++S
Sbjct: 356 HYGPGAPGAQDIYIMDVASHQWVQLTHDGGRNDFPSWAPDGRHVVFQSSRSGR--EEIWS 413

Query: 421 IDLNGRNETLINTPAYASDPQW 442
           +  +G  +T +      S P W
Sbjct: 414 MLADGSQQTQLTNSGANSMPNW 435



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 11/165 (6%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D  GAN++ LT  +      P ++P              + ++Y MD       K     
Sbjct: 277 DISGANLKRLTNVKGPDT-SPTWNPKTNAQIAFVSGRTGLPQIYTMDVDGSNVIKMTD-- 333

Query: 257 RSMILAPRFSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +   ++P +S NG+  + +  +        A DIY +D+ S+   +LT+    N   S++
Sbjct: 334 QGYAISPSWSPNGQFLVFAWTRHYGPGAPGAQDIYIMDVASHQWVQLTHDGGRNDFPSWA 393

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           PD   +VF+S R G+E+++ M ++GS Q +++     S   P WS
Sbjct: 394 PDGRHVVFQSSRSGREEIWSMLADGSQQTQLTNSGANSM--PNWS 436


>gi|33519798|ref|NP_878630.1| translocation protein TolB [Candidatus Blochmannia floridanus]
 gi|67462001|sp|Q7VR84|TOLB_BLOFL RecName: Full=Protein tolB; Flags: Precursor
 gi|33504143|emb|CAD83405.1| tolB protein precursor [Candidatus Blochmannia floridanus]
          Length = 460

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 177/364 (48%), Gaps = 21/364 (5%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFK---QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           ++ +++ DL+ S  FN +          K+T  D IP F  W  LG   +V G +  + +
Sbjct: 61  IASIIAADLRNSGKFNTLPIAYLPYQPSKLT--DIIPTF--WEKLGINTVVLGAINIKNE 116

Query: 122 DRLRVEFRLWDVKDRKQ--IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           + + + ++L D  +     I+  ++       R  AHTISD+I++ +TG KG F +RI +
Sbjct: 117 NYV-ISYQLIDTSNNPALVILDNQYEIEKKHLRYTAHTISDEIFEKLTGIKGVFCTRIAY 175

Query: 180 VSESVVSGIIKNS--LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +   + +  IK +  LC  D DG N   +  S +  L  P +SP+ +K+AY T+      
Sbjct: 176 I---LYTNNIKYAYELCTSDYDGHNQVSICRSSEP-LMSPAWSPDGKKLAYVTFASGH-- 229

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
              ++ T  +R+   I  F +   AP +S +GK+   S+ K  ++++Y +DL SN  +++
Sbjct: 230 SELIIQTLTNRSIDNIIQFPNHNGAPAWSPDGKKLAFSLSKTGSLNLYIMDLSSNNIQQI 289

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSP 356
           T+  + N   S+ PDS  + + SD+ G  Q+Y +  +N  D  RIS     S   P  S 
Sbjct: 290 TSNRYNNTEPSWFPDSQNLAYTSDQGGVPQVYKININNNRDSHRISW-LNGSNQKPNISM 348

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTG 415
            G  +     +  K  I  +     +E  L  DS L   P+ SP+G   ++S     ++ 
Sbjct: 349 DGTFMVMVNRNKGKQYISKLNFLTGEEETLTADSVLADTPSISPNGIMFMYSSIILNNSS 408

Query: 416 SKLY 419
           S+LY
Sbjct: 409 SELY 412



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 5/129 (3%)

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIG 374
           I++ ++ +   +L     +G +Q  I +  E     P WSP G  +A+  F SG    I 
Sbjct: 176 ILYTNNIKYAYELCTSDYDGHNQVSICRSSEP-LMSPAWSPDGKKLAYVTFASGHSELII 234

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               + S + ++   ++  AP WSP G+ L FS  K G     LY +DL+  N   I + 
Sbjct: 235 QTLTNRSIDNIIQFPNHNGAPAWSPDGKKLAFSLSKTGSL--NLYIMDLSSNNIQQITSN 292

Query: 435 AY-ASDPQW 442
            Y  ++P W
Sbjct: 293 RYNNTEPSW 301


>gi|260912913|ref|ZP_05919398.1| tol-Pal system beta propeller repeat protein TolB [Pasteurella
           dagmatis ATCC 43325]
 gi|260632903|gb|EEX51069.1| tol-Pal system beta propeller repeat protein TolB [Pasteurella
           dagmatis ATCC 43325]
          Length = 432

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 174/401 (43%), Gaps = 59/401 (14%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT-----NPDSIPRFQ 101
           P+++   K+         ++++++ DL+ S  FN I  +   Q+ T     NP++     
Sbjct: 39  PIAVVPFKWNGPGSAPADIADIIASDLRNSGKFNPIPVNRMPQQPTSVAEVNPEA----- 93

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV----KDRKQIIGKKFFSSPASW-RKIAH 156
            W SLG   +V G+V         + ++L D          ++ +  ++    W R  AH
Sbjct: 94  -WASLGIDAVVVGQVTPA-NGGFNIAYQLVDTIGATGSAGAVLAQNQYTVTNKWLRYGAH 151

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           T+SD+ ++ +TG KG F +RI ++ +    G     + V D DG N +++     Q L  
Sbjct: 152 TVSDETFEKLTGIKGAFRTRIAYIVQKN-GGSQPYEVRVSDYDGFN-QFIVNRSSQPLMS 209

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +S + +K+AY ++++    ++ + D     A K + +F+    AP FS +G R   + 
Sbjct: 210 PAWSADGKKLAYVSFENRK-SQLVVQDLG-SGARKVVASFKGHNGAPAFSPDGSRLAFAS 267

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D  ++IY ++L S    +LT     N   S+SPD   IVF SDR G  Q+Y M + G 
Sbjct: 268 SQDGVLNIYVMNLGSGQIAQLTRGAGNNTEPSWSPDGQTIVFTSDRSGSPQVYQMSATGG 327

Query: 337 DQKRISQDK-----------------------------------EASYFD--PVWSPQGD 359
               +S                                       +++ D  P  SP G 
Sbjct: 328 GASLVSAGGRSYSGQITADGSTLIMISGDNIIKKDLVSGSTEVLSSTFLDESPSISPNGI 387

Query: 360 LIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           +I ++   G    + ++  DG  + RL   D  ++ P WSP
Sbjct: 388 MIIYSSTQGLGKVLQLVSADGRFKARLPGNDGQVKFPAWSP 428


>gi|189220463|ref|YP_001941103.1| Periplasmic component of the Tol biopolymer transport system
           [Methylacidiphilum infernorum V4]
 gi|189187321|gb|ACD84506.1| Periplasmic component of the Tol biopolymer transport system
           [Methylacidiphilum infernorum V4]
          Length = 365

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 181/395 (45%), Gaps = 45/395 (11%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFN---LISQDSFKQKIT--NPDSIPRFQDWNSLGAQ 109
           +  ++  GGKV  V  +  Q  D  N   ++S+D  +  +   +P+   R++        
Sbjct: 3   YAQVEVTGGKV-RVFLEQFQGKDAENCRKIVSRDLLQTLLVEVSPEENQRYE-------- 53

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
             +T R+  +      +E  L D   +++++ K F    A  R+ AH  SD + +++TG 
Sbjct: 54  --ITARLSDKA-----LEGILVDKVKKRELLHKSFVG--AEMRQSAHLFSDALLEALTGI 104

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           KG  + +I F+S    +G     L +MD DG  ++ LT  +  I   PR+S +   +AY 
Sbjct: 105 KGFSSCKIAFISSE--TGF--KELYMMDMDGEGLQRLTADK-TISAHPRWSHDHSMIAYT 159

Query: 230 TYDD--EDILRVYLM-DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           +Y     D+  + L   +RI     R   F  +     FS + +   +++ KD   +IY 
Sbjct: 160 SYKSGYPDVYIIKLAKHSRI-----RFSFFPGVNSGASFSPDDQNIALTLSKDGNPEIYI 214

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           + +      +LT     N S  +SPD  QIV+ SD  G  QLY++ + G   KR+     
Sbjct: 215 MGIDGGPPRQLTRNRATNTSPCWSPDGKQIVYTSDERGSIQLYIISAEGGQPKRLITGNT 274

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  +P WS  G  IAF+   G +F IG+   + +Q  +L      + P+W+P+ R L++
Sbjct: 275 YSS-EPDWSADGQKIAFSARIGGQFQIGIFNLNTNQASILTTQGG-EDPSWTPNSRHLVY 332

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDP 440
           + +        LY +D   R    +N    + S+P
Sbjct: 333 ASQ------GSLYLMDTVSRQSIKLNCELKHCSEP 361



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 15/167 (8%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++Y +D+     +RLT    I+    +S D S I + S + G   +Y+++     + R S
Sbjct: 123 ELYMMDMDGEGLQRLTADKTISAHPRWSHDHSMIAYTSYKSGYPDVYIIKLAKHSRIRFS 182

Query: 343 QDKEASYFDPV-----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPT 396
                 +F  V     +SP    IA T        I +M  DG   R L  + +   +P 
Sbjct: 183 ------FFPGVNSGASFSPDDQNIALTLSKDGNPEIYIMGIDGGPPRQLTRNRATNTSPC 236

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQW 442
           WSP G+ ++++  + G    +LY I    G+ + LI    Y+S+P W
Sbjct: 237 WSPDGKQIVYTSDERGSI--QLYIISAEGGQPKRLITGNTYSSEPDW 281


>gi|145634622|ref|ZP_01790331.1| translocation protein TolB precursor [Haemophilus influenzae
           PittAA]
 gi|145268167|gb|EDK08162.1| translocation protein TolB precursor [Haemophilus influenzae
           PittAA]
          Length = 427

 Score =  115 bits (287), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/376 (24%), Positives = 172/376 (45%), Gaps = 47/376 (12%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G +  
Sbjct: 54  ISKIVADDLRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSG-NGY 111

Query: 125 RVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G    +  ++    W R  AHT+SD++++ +TG +G F +RI +
Sbjct: 112 SITYQLIDTVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTGIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++   ++
Sbjct: 172 VVQKN-GGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKK-SQL 228

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D     A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+
Sbjct: 229 VVQDLN-SGARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTS 287

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKE----- 346
               N   ++SPD + I+F SDR G  Q+Y M ++G            +IS D +     
Sbjct: 288 GAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDASGGSATAVGGRGSAQISADGKTLVMI 347

Query: 347 --------------------ASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QE 383
                                S+    P  SP G +I ++   G    + ++  DG  + 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGRFKA 407

Query: 384 RLLVEDSNLQAPTWSP 399
            L   D  ++ P WSP
Sbjct: 408 SLPGSDGQVKFPAWSP 423


>gi|332290106|ref|YP_004420958.1| translocation protein TolB [Gallibacterium anatis UMN179]
 gi|330433002|gb|AEC18061.1| translocation protein TolB [Gallibacterium anatis UMN179]
          Length = 432

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 186/406 (45%), Gaps = 39/406 (9%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
           CLL+        T + A V++  +    +  P+++   K+         +++++S DL+ 
Sbjct: 15  CLLVQA------TQVFAEVRIVIDEGVDSARPIAVVPFKWNGPGSAPADIADIISSDLRF 68

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  FN I  D   Q+ T+   +   + W++LG   +V G+V   G     + ++L D   
Sbjct: 69  SGKFNPIPVDRMPQQPTSAGEV-NVEAWSALGIDAIVVGQVTPAGGG-YSISYQLVDTVG 126

Query: 136 RK----QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
                  ++ +  ++    W R  AHT+SD +++ +TG +G F +RI +V       I  
Sbjct: 127 ASGTPGAVLSQNSYTVTNQWIRWGAHTVSDQVFEKLTGIRGAFRTRIAYV-------IQN 179

Query: 191 NS----LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           NS    L V D DG N   +  S   I+  P +S + +K+AY+ ++ +  L V  +    
Sbjct: 180 NSGSYDLQVSDYDGYNAFNVFHSSQPIM-SPAWSADGKKLAYSVFEKKKSLLV--LQDLA 236

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            ++ K I +      AP FS +G R   +  +D  ++IY + +   +  +LT+    N  
Sbjct: 237 SKSRKIIASLPGHNGAPSFSPDGSRIAFASNEDGVLNIYVMGVGGGSPVKLTSGSGNNTE 296

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+S D S I+F SDR G   +Y+M +NG     +S    +  +    SP G  I     
Sbjct: 297 PSWSSDGSSIIFTSDRGGAPAVYMMGANGGGASLVSPPGNS--YSGEMSPDGKEIVMVN- 353

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKK 410
            G K     +KKD     +    S    ++P+++P+G  +I+S  +
Sbjct: 354 -GNKL----VKKDLESGSITALTSTFLDESPSFAPNGTMVIYSSTQ 394


>gi|85713384|ref|ZP_01044391.1| Periplasmic component of the Tol biopolymer transport system
           [Idiomarina baltica OS145]
 gi|85692790|gb|EAQ30781.1| Periplasmic component of the Tol biopolymer transport system
           [Idiomarina baltica OS145]
          Length = 298

 Score =  113 bits (283), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 154/299 (51%), Gaps = 12/299 (4%)

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           +R+ +H ISD +Y+++TGEKG F +RI +V+ +         L V D DGAN + L  S 
Sbjct: 9   FRQYSHRISDVVYEALTGEKGAFMTRIAYVTVNQ-DDQYPYKLLVADYDGANEKVLLRS- 66

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            + L  P +SP+  K+AY +++++    +++ D    R  +++ +F  +  +P FS  G 
Sbjct: 67  PEPLMSPSWSPDGNKLAYVSFENKRP-EIFVQDIYTTRR-EKVTSFPGINGSPVFSPKGD 124

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +  + + KD   ++Y +DL++   +RLT    I+   S++PD   IVF S+R G+ QLY 
Sbjct: 125 KMAMVLSKDGNPELYVMDLKTKNLQRLTRNRTIDTEPSWTPDGRSIVFTSERGGRPQLYS 184

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +  +  D +R++ + E +    V  P GD +     +   + I   +      ++L   +
Sbjct: 185 VNLSSGDVRRLTFEGEQNLGGTVM-PSGDSMILVNRTNGNYHIARQEFPRGTMQVLTRTA 243

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFM 446
             ++P+ +P+G  +I+S   +      L S D  GR +  +  PA + +   P W  FM
Sbjct: 244 LDESPSVAPNGSMVIYSTTHNNKQVLALVSTD--GRFKARL--PASSGEVKSPSWSPFM 298


>gi|32491161|ref|NP_871415.1| hypothetical protein WGLp412 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|32699700|sp|Q8D2E2|TOLB_WIGBR RecName: Full=Protein tolB; Flags: Precursor
 gi|25166368|dbj|BAC24558.1| tolB [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 431

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 209/431 (48%), Gaps = 37/431 (8%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQ 74
           LL  LI  FF  + ++ V ++ N        I  + F    V+ +     +S+++S DLQ
Sbjct: 4   LLFFLICVFFSKTSYSNVDISINKGIDISTPIGISSFEWVEVNENNNYENISKIISCDLQ 63

Query: 75  RSDVFNLI-----SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
            S  F+ I     S  S +++I N +SI    + N L    ++TG++         + ++
Sbjct: 64  NSGKFSPIEIYKESNKSIEKQIKN-NSI----NLNKLNINTILTGKISLNYNGEYLISYK 118

Query: 130 LWDVKDRKQIIGKKFFSSP-----ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           L D+ +     GK   S        S+RK+AH IS++I++ +TG +G F++RI ++  + 
Sbjct: 119 LIDLVNYP---GKILLSGYRTVHLQSFRKVAHEISNEIFKKLTGIQGVFHTRIAYILYNK 175

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +   K  LC+ D DG N   +  S +  L  P +SP+ +K+AY T++      + + D 
Sbjct: 176 -NNEYKYKLCISDYDGYNQNIIHQS-NMPLMSPSWSPDGKKIAYVTFEKGS-SEIKIKDI 232

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +     K I +F     AP FS NG+    ++ K  ++++Y ++L++   +++T+    N
Sbjct: 233 KTGSI-KHISSFPYHNGAPAFSPNGENLAFALSKTGSLNLYVMNLKNGYIKQITHGNSNN 291

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDL 360
              S+ PD++ + + SD+ G  Q+Y +  +     R+    S+++ A+      SP G  
Sbjct: 292 TEPSWFPDNNSLAYTSDQSGTPQIYKINISNGKFNRLSWLGSKNQNANV-----SPDGKF 346

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IA      +   I +   +    +++ E    +AP+ SP+   +I++    GD+ S +  
Sbjct: 347 IAMVNSEKKSQHIALFDINMDNAKIITETFLDEAPSISPNNVMIIYTSSY-GDS-SVIEL 404

Query: 421 IDLNGRNETLI 431
           I  NGR +T I
Sbjct: 405 ISTNGRFKTSI 415


>gi|148825336|ref|YP_001290089.1| translocation protein TolB [Haemophilus influenzae PittEE]
 gi|166229979|sp|A5UAA5|TOLB_HAEIE RecName: Full=Protein tolB; Flags: Precursor
 gi|148715496|gb|ABQ97706.1| translocation protein TolB precursor [Haemophilus influenzae
           PittEE]
 gi|309972459|gb|ADO95660.1| Outer membrane integrity protein TolB [Haemophilus influenzae
           R2846]
          Length = 427

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 172/376 (45%), Gaps = 47/376 (12%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q+ T+   +   + W+++G   +V G+V+  G +  
Sbjct: 54  ISKIVADDLRNSGKFNPIAVSQMPQRPTSAAEV-NPEAWSNIGIDAIVIGQVVPSG-NGY 111

Query: 125 RVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G    +  ++    W R  AHT+SD++++ +T  +G F +RI +
Sbjct: 112 SITYQLIDTVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++   ++
Sbjct: 172 VVQKN-GGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKK-SQL 228

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D     A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+
Sbjct: 229 VVQDLNFG-ARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTS 287

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKE----- 346
               N   ++SPD + I+F SDR G  Q+Y M ++G            +IS D +     
Sbjct: 288 GAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDASGGSATVVGGRGSAQISADGKTLVMI 347

Query: 347 --------------------ASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QE 383
                                S+    P  SP G +I ++   G    + ++  DG  + 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGRFKA 407

Query: 384 RLLVEDSNLQAPTWSP 399
            L   D  ++ P WSP
Sbjct: 408 SLPGSDGQVKFPAWSP 423


>gi|301169084|emb|CBW28681.1| periplasmic protein [Haemophilus influenzae 10810]
          Length = 427

 Score =  113 bits (282), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 169/376 (44%), Gaps = 47/376 (12%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G +  
Sbjct: 54  ISKIVADDLRNSGKFNPIAMSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSG-NGY 111

Query: 125 RVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G    +  ++    W R  AHT+SD++++ +T  +G F +RI +
Sbjct: 112 SITYQLIDTVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++   ++
Sbjct: 172 VVQKN-GGSQPYEIRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKK-SQL 228

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D     A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+
Sbjct: 229 VVQDLN-SGARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTS 287

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKEASYF- 350
               N   ++SPD + I+F SDR G  Q+Y M ++G            +IS D +     
Sbjct: 288 GAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDASGGSATVVGGRGSAQISADGKTLVMI 347

Query: 351 --------------------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QE 383
                                      P  SP G +I ++   G    + ++  DG  + 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGRFKA 407

Query: 384 RLLVEDSNLQAPTWSP 399
            L   D  ++ P WSP
Sbjct: 408 SLPGSDGQVKFPAWSP 423


>gi|320539139|ref|ZP_08038810.1| periplasmic protein [Serratia symbiotica str. Tucson]
 gi|320030777|gb|EFW12785.1| periplasmic protein [Serratia symbiotica str. Tucson]
          Length = 430

 Score =  112 bits (281), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 93/415 (22%), Positives = 177/415 (42%), Gaps = 52/415 (12%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+++   K+         + ++V  DL+ S  F  I      Q
Sbjct: 19  LHAEVRIEITQGVDSARPIAVVPFKWAGSGTPPEDIGKIVGADLRNSGKFTPIDVARMPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           + T    +     W +LG   +V G+V         + ++L D       ++ +  F   
Sbjct: 79  QPTTASEVTP-AAWTALGIDAVVVGQVQPGADGSYLISYQLVDTSGSPGSVLAQNQFKVT 137

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R  AHT SD++++ + G KG F +RI ++ ++   G     L V D DG N +++ 
Sbjct: 138 QQWLRYSAHTASDEVFEKLIGTKGAFRTRIAYIVQTN-GGKFPYELRVADYDGYN-QFVV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               + L  P +SP+  K+AY T+  E      ++ T  + A  +I  F     AP FS 
Sbjct: 196 HRSPEPLMSPAWSPDGSKLAYVTF--ESGRSALVVQTLANGAISQIAAFPRHNGAPAFSP 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G R   ++ K  ++++Y ++L S    ++T+    N   ++ PD   + + SD+ G+ Q
Sbjct: 254 DGSRLAFALSKSGSLNLYVMNLGSGQMTQITDGRSNNTEPAWFPDGQTLAYTSDQGGRPQ 313

Query: 328 LYVMQSNGSDQKRI----SQDKEA------------------------------------ 347
           +Y + ++G   +R+    SQ++ A                                    
Sbjct: 314 IYKISASGGASQRLTWEGSQNQNAMVSSDGKFLVMVSSNNGVQHIAKQDLGSGAVQVLTG 373

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           +  D  P  +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 374 TLLDETPSIAPNGTMVIYSSMQGIGSVLQLVSTDGRFKARLPATDGQVKSPAWSP 428


>gi|68248985|ref|YP_248097.1| translocation protein TolB [Haemophilus influenzae 86-028NP]
 gi|81336603|sp|Q4QNG0|TOLB_HAEI8 RecName: Full=Protein tolB; Flags: Precursor
 gi|68057184|gb|AAX87437.1| TolB [Haemophilus influenzae 86-028NP]
          Length = 427

 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 172/376 (45%), Gaps = 47/376 (12%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q+ T+   +   + W+++G   +V G+V+  G +  
Sbjct: 54  ISKIVADDLRNSGKFNPIAVSQMPQRPTSAAEV-NPEAWSNIGIDAIVIGQVVPSG-NGY 111

Query: 125 RVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G    +  ++    W R  AHT+SD++++ +T  +G F +RI +
Sbjct: 112 SITYQLIDTVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++   ++
Sbjct: 172 VVQKN-GGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKK-SQL 228

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D     A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+
Sbjct: 229 VVQDLN-SGARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTS 287

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKE----- 346
               N   ++SPD + I+F SDR G  Q+Y M ++G            +IS D +     
Sbjct: 288 GAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDASGGSATAVGGRGSAQISADGKTLVMI 347

Query: 347 --------------------ASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QE 383
                                S+    P  SP G +I ++   G    + ++  DG  + 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGRFKA 407

Query: 384 RLLVEDSNLQAPTWSP 399
            L   D  ++ P WSP
Sbjct: 408 SLPGSDGQVKFPAWSP 423


>gi|16272330|ref|NP_438543.1| translocation protein TolB [Haemophilus influenzae Rd KW20]
 gi|260580555|ref|ZP_05848383.1| tol-Pal system beta propeller repeat protein TolB [Haemophilus
           influenzae RdAW]
 gi|1174729|sp|P44677|TOLB_HAEIN RecName: Full=Protein tolB; Flags: Precursor
 gi|1573352|gb|AAC22040.1| colicin tolerance protein (tolB) [Haemophilus influenzae Rd KW20]
 gi|260092897|gb|EEW76832.1| tol-Pal system beta propeller repeat protein TolB [Haemophilus
           influenzae RdAW]
          Length = 427

 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 172/376 (45%), Gaps = 47/376 (12%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q+ T+   +   + W+++G   +V G+V+  G +  
Sbjct: 54  ISKIVADDLRNSGKFNPIAVSQMPQRPTSAAEV-NPEAWSNIGIDAIVIGQVVPSG-NGY 111

Query: 125 RVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G    +  ++    W R  AHT+SD++++ +T  +G F +RI +
Sbjct: 112 SITYQLIDTVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++   ++
Sbjct: 172 VVQKN-GGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKK-SQL 228

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D     A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+
Sbjct: 229 VVQDLN-SGARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTS 287

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKE----- 346
               N   ++SPD + I+F SDR G  Q+Y M ++G            +IS D +     
Sbjct: 288 GAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDASGGSATAVGGRGSAQISADGKTLVMI 347

Query: 347 --------------------ASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QE 383
                                S+    P  SP G +I ++   G    + ++  DG  + 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGRFKA 407

Query: 384 RLLVEDSNLQAPTWSP 399
            L   D  ++ P WSP
Sbjct: 408 SLPGSDGQVKFPAWSP 423


>gi|145632629|ref|ZP_01788363.1| translocation protein TolB precursor [Haemophilus influenzae 3655]
 gi|229844455|ref|ZP_04464595.1| translocation protein TolB [Haemophilus influenzae 6P18H1]
 gi|144986824|gb|EDJ93376.1| translocation protein TolB precursor [Haemophilus influenzae 3655]
 gi|229812704|gb|EEP48393.1| translocation protein TolB [Haemophilus influenzae 6P18H1]
          Length = 427

 Score =  112 bits (281), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 170/376 (45%), Gaps = 47/376 (12%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q+ T+   +   + W+++G   +V G+V+  G +  
Sbjct: 54  ISKIVADDLRNSGKFNPIAVSQMPQRPTSAAEV-NPEAWSNIGIDAIVIGQVVPSG-NGY 111

Query: 125 RVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G    +  ++    W R  AHT+SD++++ +T  +G F +RI +
Sbjct: 112 SITYQLIDTVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++   ++
Sbjct: 172 VVQKN-GGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKK-SQL 228

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D     A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+
Sbjct: 229 VVQDLN-SGARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTS 287

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKEASYF- 350
               N   ++SPD + I+F SDR G  Q+Y M ++G            +IS D +     
Sbjct: 288 GAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDASGGSATVVGGRGSAQISADGKTLVMI 347

Query: 351 --------------------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QE 383
                                      P  SP G +I ++   G    + ++  DG  + 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGRFKA 407

Query: 384 RLLVEDSNLQAPTWSP 399
            L   D  ++ P WSP
Sbjct: 408 SLPGSDGQVKFPAWSP 423


>gi|260582354|ref|ZP_05850147.1| tol-Pal system beta propeller repeat protein TolB [Haemophilus
           influenzae NT127]
 gi|260094722|gb|EEW78617.1| tol-Pal system beta propeller repeat protein TolB [Haemophilus
           influenzae NT127]
          Length = 427

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 170/379 (44%), Gaps = 53/379 (13%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q+ T+   +   + W+++G   +V G+V+  G +  
Sbjct: 54  ISKIVADDLRNSGKFNPIAVSQMPQRPTSAAEV-NPEAWSNIGIDAIVIGQVVPSG-NGY 111

Query: 125 RVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G    +  ++    W R  AHT+SD++++ +T  +G F +RI +
Sbjct: 112 SITYQLIDTVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED---I 236
           V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++    +
Sbjct: 172 VVQKN-GGSQPYEIRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLV 229

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           ++     TR     K + +F+    AP FS +G R   +  +D  ++IY +        +
Sbjct: 230 IQDLNSGTR-----KVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQ 284

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKEAS 348
           LT+    N   ++SPD + I+F SDR G  Q+Y M ++G            +IS D +  
Sbjct: 285 LTSGAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDASGGSATVVGGRGSAQISADGKTL 344

Query: 349 YF---------------------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                                         P  SP G +I ++   G    + ++  DG 
Sbjct: 345 VMINGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGR 404

Query: 382 -QERLLVEDSNLQAPTWSP 399
            +  L   D  ++ P WSP
Sbjct: 405 FKASLPGSDGQVKFPAWSP 423


>gi|196233271|ref|ZP_03132117.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
 gi|196222742|gb|EDY17266.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
          Length = 564

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 154/385 (40%), Gaps = 49/385 (12%)

Query: 48  VSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLG 107
           + IA       D  GG  ++++  DL  S  FNL+   S    +          + NSL 
Sbjct: 37  IPIAIGSIAGAD--GGPAAKILQNDLAMSGYFNLVPSASAGFIVGGT------SNGNSLA 88

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
             V           DR             K ++ K F     S R   H  +D+I +++T
Sbjct: 89  GSV----------TDR-----------SGKTVLMKTF---SGSARGKVHAYADEIVETLT 124

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           G KG  +S++ FV            + + D DG+N+R LT +   I   PR SP+   + 
Sbjct: 125 GNKGIASSKVAFVGTHTG----HKEIYLADADGSNVRQLT-NDANISVGPRLSPDGSHLV 179

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y  Y       VY +D     A  RI  F        +S NG+   + + KD   ++Y+ 
Sbjct: 180 YTGYK-SGYADVYEIDLG-SGARNRIIKFPGTNTGAAYSPNGRELAVILSKDGNPELYTT 237

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                   RLT+T  +  S ++SP   +I++ SD  G  QLY + S G   + IS     
Sbjct: 238 SAGGGGAHRLTHTPGVESSPTWSPSGDEIIYSSDDRGGPQLYRISSGGGSGRLISTG-HG 296

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
              +P WSP G  +AFT   G  F I V+   GS     V     + P W    R LIF+
Sbjct: 297 YNTEPNWSPDGKKVAFTVRDG-GFTIAVLDL-GSGNVHTVGSG--EGPAWGADSRHLIFA 352

Query: 408 RKK-----DGDTGSKLYSIDLNGRN 427
                   D  TG K   +   G+N
Sbjct: 353 EGGSLILLDAQTGQKTTLVSGLGQN 377


>gi|145630447|ref|ZP_01786228.1| translocation protein TolB precursor [Haemophilus influenzae R3021]
 gi|144984182|gb|EDJ91619.1| translocation protein TolB precursor [Haemophilus influenzae R3021]
          Length = 427

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 169/376 (44%), Gaps = 47/376 (12%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G +  
Sbjct: 54  ISKIVADDLRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSG-NGY 111

Query: 125 RVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G    +  ++    W R  AHT+SD++++ +T  +G F +RI +
Sbjct: 112 SITYQLIDTVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++   ++
Sbjct: 172 VVQKN-GGSQPYEIRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKK-SQL 228

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D     A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+
Sbjct: 229 VVQDLN-SGARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTS 287

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKEASYF- 350
               N   ++SPD + I+F SDR G  Q+Y M ++G            +IS D +     
Sbjct: 288 GAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDASGGSATVVGGRGSAQISADGKTLVMI 347

Query: 351 --------------------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QE 383
                                      P  SP G +I ++   G    + ++  DG  + 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGRFKA 407

Query: 384 RLLVEDSNLQAPTWSP 399
            L   D  ++ P WSP
Sbjct: 408 SLPGSDGQVKFPAWSP 423


>gi|329122257|ref|ZP_08250845.1| translocation protein TolB [Haemophilus aegyptius ATCC 11116]
 gi|327473818|gb|EGF19235.1| translocation protein TolB [Haemophilus aegyptius ATCC 11116]
          Length = 427

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 169/376 (44%), Gaps = 47/376 (12%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G +  
Sbjct: 54  ISKIVADDLRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSG-NGY 111

Query: 125 RVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G    +  ++    W R  AHT+SD++++ +T  +G F +RI +
Sbjct: 112 SITYQLIDTVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++   ++
Sbjct: 172 VVQKN-GGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKK-SQL 228

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D     A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+
Sbjct: 229 VVQDLN-SGARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTS 287

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKEASYF- 350
               N   ++SPD + I+F SDR G  Q+Y M ++G            +IS D +     
Sbjct: 288 GAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDASGGSATAVGGRGSAQISADGKTLVMI 347

Query: 351 --------------------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QE 383
                                      P  SP G +I ++   G    + ++  DG  + 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGRFKA 407

Query: 384 RLLVEDSNLQAPTWSP 399
            L   D  ++ P WSP
Sbjct: 408 SLPGSDGQVKFPAWSP 423


>gi|229846469|ref|ZP_04466577.1| translocation protein TolB [Haemophilus influenzae 7P49H1]
 gi|229810562|gb|EEP46280.1| translocation protein TolB [Haemophilus influenzae 7P49H1]
          Length = 427

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 169/376 (44%), Gaps = 47/376 (12%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G +  
Sbjct: 54  ISKIVADDLRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSG-NGY 111

Query: 125 RVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G    +  ++    W R  AHT+SD++++ +T  +G F +RI +
Sbjct: 112 SITYQLIDTVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++   ++
Sbjct: 172 VVQKN-GGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKK-SQL 228

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D     A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+
Sbjct: 229 VVQDLN-SGARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTS 287

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKEASYF- 350
               N   ++SPD + I+F SDR G  Q+Y M ++G            +IS D +     
Sbjct: 288 GAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDASGGSATAVGGRGSAQISADGKTLVMI 347

Query: 351 --------------------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QE 383
                                      P  SP G +I ++   G    + ++  DG  + 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLISADGRFKA 407

Query: 384 RLLVEDSNLQAPTWSP 399
            L   D  ++ P WSP
Sbjct: 408 SLPGSDGQVKFPAWSP 423


>gi|319775689|ref|YP_004138177.1| TolB protein [Haemophilus influenzae F3047]
 gi|319898096|ref|YP_004136293.1| tolb protein [Haemophilus influenzae F3031]
 gi|317433602|emb|CBY81986.1| TolB protein [Haemophilus influenzae F3031]
 gi|317450280|emb|CBY86496.1| TolB protein [Haemophilus influenzae F3047]
          Length = 427

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 169/376 (44%), Gaps = 47/376 (12%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G +  
Sbjct: 54  ISKIVADDLRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAVVIGQVVPSG-NGY 111

Query: 125 RVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G    +  ++    W R  AHT+SD++++ +T  +G F +RI +
Sbjct: 112 SITYQLIDTVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++   ++
Sbjct: 172 VVQKN-GGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKK-SQL 228

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D     A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+
Sbjct: 229 VVQDLN-SGARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTS 287

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKEASYF- 350
               N   ++SPD + I+F SDR G  Q+Y M ++G            +IS D +     
Sbjct: 288 GAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDASGGSATAVGGRGSAQISADGKTLVMI 347

Query: 351 --------------------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QE 383
                                      P  SP G +I ++   G    + ++  DG  + 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGRFKA 407

Query: 384 RLLVEDSNLQAPTWSP 399
            L   D  ++ P WSP
Sbjct: 408 SLPGSDGQVKFPAWSP 423


>gi|284007876|emb|CBA73795.1| TolB protein [Arsenophonus nasoniae]
          Length = 355

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 155/326 (47%), Gaps = 15/326 (4%)

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSPASW-RKIAHTISD 160
           W +LG   +V G+V      +  + ++L DV +    ++ +      A W R  AHTISD
Sbjct: 16  WTALGINAVVVGQVQPAADGQYIISYQLVDVVNSPGAVLTQNQLKVAAKWLRYAAHTISD 75

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           +++  +TG +G F +RI +V ++   G     L V D DG N ++      + L  P +S
Sbjct: 76  EVFAKLTGIRGAFRTRIAYVVKTN-GGKFPYELRVSDYDGYN-QFTVHRSPEPLMSPAWS 133

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + +K+AY T++        ++ T      ++I +F     AP FS +G +    + K  
Sbjct: 134 ADGEKLAYVTFESGS--SALVIQTLATGEVRQIASFPRHNGAPTFSPDGTKLAFVLSKSG 191

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           ++++Y +DL S  T ++T+    N   ++ PD+  +++ SD+ G+ Q+Y +  NG   +R
Sbjct: 192 SLNLYVMDLASGQTRQITDGRSNNTEPNWMPDNQTLIYTSDQAGRPQIYKLNINGGVPER 251

Query: 341 IS----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           I+    Q+++AS      SP G  +     S  K  I            L +    + P+
Sbjct: 252 ITWEGKQNQDASV-----SPDGKFMVMVNSSDGKQHIAKQDLATGNVEYLTDTFLDETPS 306

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSID 422
            +P+G  +I+S  +   T  +L S D
Sbjct: 307 IAPNGTMVIYSSSQGLGTVLQLVSTD 332


>gi|148827587|ref|YP_001292340.1| translocation protein TolB [Haemophilus influenzae PittGG]
 gi|166229980|sp|A5UGQ1|TOLB_HAEIG RecName: Full=Protein tolB; Flags: Precursor
 gi|148718829|gb|ABQ99956.1| hypothetical protein CGSHiGG_05070 [Haemophilus influenzae PittGG]
          Length = 427

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/377 (23%), Positives = 171/377 (45%), Gaps = 49/377 (12%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G +  
Sbjct: 54  ISKIVADDLRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSG-NGY 111

Query: 125 RVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G    +  ++    W R  AHT+SD++++ +T  +G F +RI +
Sbjct: 112 SITYQLIDTVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++   + 
Sbjct: 172 VVQKN-GGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENK---KS 226

Query: 240 YLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            L+   ++   +++  +F+    AP FS +G R   +  +D  ++IY +        +LT
Sbjct: 227 QLVVQDLNSGSRKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLT 286

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKEASYF 350
           +    N   ++SPD + I+F SDR G  Q+Y M ++G +          +IS D +    
Sbjct: 287 SGAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDASGGNATAVGGRGSAQISADGKTLVM 346

Query: 351 ---------------------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-Q 382
                                       P  SP G +I ++   G    + ++  DG  +
Sbjct: 347 INGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGRFK 406

Query: 383 ERLLVEDSNLQAPTWSP 399
             L   D  ++ P WSP
Sbjct: 407 ASLPGSDGQVKFPAWSP 423


>gi|190149576|ref|YP_001968101.1| protein tolB precursor [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|189914707|gb|ACE60959.1| Protein tolB precursor [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
          Length = 311

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 121/237 (51%), Gaps = 9/237 (3%)

Query: 101 QDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD-VKDRKQIIGKKFFSSPASW-RKIAHTI 158
           Q W  +G   +V G+V   G     V ++L D + +   ++ +  F+ PA+  R+ AHT+
Sbjct: 32  QQWTDIGVDSVVVGQVTPTGGG-YNVAYQLVDTLSNPATVLAQGAFNVPAAQIRQGAHTV 90

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           SD +++ IT  +G F ++I +V   V  G+    L V D DG N   +  S++  L  P 
Sbjct: 91  SDQVFEKITQIRGAFRTKIAYV---VQRGVSSYELRVSDYDGYNAFTVVKSKEP-LMSPE 146

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+  ++AY T++++   +V + D R   + + +   R    AP FS +G R   +  +
Sbjct: 147 WSPDGSRLAYVTFENKK-AQVVVHDLR-SGSRRVVAALRGHNGAPAFSPDGSRIAFASNQ 204

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           D  +DIY V        +LT     N   S+SPD S I F SDR G  Q+Y M S+G
Sbjct: 205 DGELDIYVVGANGGKPSKLTANAGNNTEPSWSPDGSTIYFTSDRAGSPQVYRMGSSG 261



 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 2/109 (1%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S  +SPD S++ + +    K Q+ V     S  +R+          P +SP G  IAF 
Sbjct: 143 MSPEWSPDGSRLAYVTFENKKAQVVVHDLR-SGSRRVVAALRGHNGAPAFSPDGSRIAFA 201

Query: 365 KFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
                +  I V+  +G +  +L     N   P+WSP G ++ F+  + G
Sbjct: 202 SNQDGELDIYVVGANGGKPSKLTANAGNNTEPSWSPDGSTIYFTSDRAG 250



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 5/118 (4%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERL 385
           +L V   +G +   + + KE     P WSP G  +A+  F  +K  + V   + GS+  +
Sbjct: 121 ELRVSDYDGYNAFTVVKSKEP-LMSPEWSPDGSRLAYVTFENKKAQVVVHDLRSGSRRVV 179

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQW 442
                +  AP +SP G  + F+  +DG+    +Y +  N G+   L       ++P W
Sbjct: 180 AALRGHNGAPAFSPDGSRIAFASNQDGEL--DIYVVGANGGKPSKLTANAGNNTEPSW 235


>gi|167626687|ref|YP_001677187.1| group A colicin translocation protein TolB [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
 gi|167596688|gb|ABZ86686.1| group A colicin translocation; TolB protein [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
          Length = 435

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 189/403 (46%), Gaps = 39/403 (9%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ ++  DL  +    L   DS K +I    +IP    W SL +  +V  +  
Sbjct: 45  VDQFPQQVNSIIVSDLNHNG--KLQGDDSIKYEINQSQNIP----WKSLKSDYVVLTKYT 98

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSR 176
           K+  +   VE +++   D   I    + + S A  R +AH +++ +YQ +TGE+G F ++
Sbjct: 99  KDSNNSYTVEVQIYKRNDTSYIRSITYKNISTALVRPLAHKVANYVYQKLTGEQGFFLTK 158

Query: 177 ILFVSES---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +V  S      G I   L + D DG N   +    D  +  P +S + + + Y++Y  
Sbjct: 159 LAYVQVSNPYARYGRIY-ELVISDYDGYNKHTVLRQSDNPIATPSWSNDGRYIVYSSYSG 217

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
              + VY +D    +   RI NF+ +  +P FS NGK   +++ K   +  +IY ++L +
Sbjct: 218 GS-MGVYTLDIATGKV-TRISNFKGINSSPSFSPNGKEIALALSKGYSDQTNIYILNLAT 275

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-- 349
            A +R+T    IN +  +SP+   IVF SDR+G+  +YV   N     R  Q  + S   
Sbjct: 276 KALKRIT-INGINTAPKFSPNGQSIVFTSDRDGRPNIYVAPVN----SRYPQSSKLSSRI 330

Query: 350 ---FDPVWSPQGDLIAF---TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
              ++P ++P G  I F   ++ SG + A      +GS   +    S+  +PT SP G  
Sbjct: 331 YQGYEPNYTPDGKDIVFMNQSRSSGTQIA-DFNLANGSVTNITNGKSD-SSPTVSPFGNM 388

Query: 404 LIF-SRKKDGDT--------GSKLYSIDLNGRNETLINTPAYA 437
           + + S    G +        G   +++D       LI +P+++
Sbjct: 389 IAYISTNSRGYSSLDMVSLDGDNHFNVDTANNGNILIQSPSWS 431


>gi|319779142|ref|YP_004130055.1| tolB protein precursor [Taylorella equigenitalis MCE9]
 gi|317109166|gb|ADU91912.1| tolB protein precursor [Taylorella equigenitalis MCE9]
          Length = 415

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 171/357 (47%), Gaps = 46/357 (12%)

Query: 62  GGKVSEVVSKDLQRSDVFNL-----ISQDSFKQKITNPDSIPRFQDWNSL-----GAQVL 111
           G +++++V+KDL  S  FN+     IS+D   +            DW+ L     GA + 
Sbjct: 56  GKQIADIVAKDLTNSGQFNVTRIASISKDPHDK-----------LDWDKLVDLSKGANI- 103

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           VTG    + KD   V +R  D   +K  + ++   S  S R IAH ISD  Y+   G KG
Sbjct: 104 VTGF---DNKDH--VHYRFLDPIQQK--VREEARVSNPSQRAIAHKISDYAYEQSIGLKG 156

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F+++I FVS          SL + D DG N + L       +  P +SP+  K+AY ++
Sbjct: 157 AFSTKIAFVS--------GRSLYISDYDGHNAKVLV--SGATIISPAWSPDGSKIAYVSF 206

Query: 232 DD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVD 288
           +  + I+ V  + T + R P  + +F+    AP +S +G    +++ +D   DIY  S D
Sbjct: 207 ESGKPIVYVQQLSTGV-RIP--VASFKGNNSAPAWSPSGVSLAVALSRDALSDIYLVSSD 263

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             + +   L+++  I     + P++S +VF SDR G  Q+Y    N     RI+ +   +
Sbjct: 264 GTTKSPRSLSSSPEIETEPFFFPNNSGLVFVSDRGGSPQIYKSGLNNGPASRITFNGSQN 323

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              P  SP  + + FT     K+ I +M      ER++    +  +PT+SP+G +++
Sbjct: 324 -LSPRISPDSNSLVFTSLRKGKYVIALMNLASGDERIISSGPDDLSPTFSPNGMNVM 379



 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 8/130 (6%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S++I F S R     LY+   +G + K +     A+   P WSP G  IA+  F   K  
Sbjct: 159 STKIAFVSGRS----LYISDYDGHNAKVLVSG--ATIISPAWSPDGSKIAYVSFESGKPI 212

Query: 373 IGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETL 430
           + V +   G +  +     N  AP WSPSG SL  +  +D  +   L S D   ++  +L
Sbjct: 213 VYVQQLSTGVRIPVASFKGNNSAPAWSPSGVSLAVALSRDALSDIYLVSSDGTTKSPRSL 272

Query: 431 INTPAYASDP 440
            ++P   ++P
Sbjct: 273 SSSPEIETEP 282


>gi|88800185|ref|ZP_01115753.1| TolB [Reinekea sp. MED297]
 gi|88777031|gb|EAR08238.1| TolB [Reinekea sp. MED297]
          Length = 434

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 190/415 (45%), Gaps = 18/415 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVSKDLQRS 76
           L+  ++   +P   HA + +       +   IA   F       L  +V  +++ +L R+
Sbjct: 9   LMTAVLALCWPLLSHADLDIVVTKGYDTQTKIAVVPFFWEGSQALPERVDNLITNNLVRT 68

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F+ ++      +  + D +  F+DW  L  + L+ G +   G  ++  E  L+DV   
Sbjct: 69  GRFDPLAPAKMLSQPYSEDGV-FFRDWRLLNQEFLIIGHLKPYGDAKVEAEIALYDVVKN 127

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN-SLCV 195
           ++++           R  AH++SD  Y+ +TG +G F++RI FV+  +VS    +  L +
Sbjct: 128 RRVVRVTQVVGVHQLRDFAHSLSDLFYERMTGVRGIFSTRIAFVTRKIVSQQQYDYRLQI 187

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG   R +  S + I+    +S    +VA+A     D  ++++ D R  +    I +
Sbjct: 188 ADADGQRARTIYRSNEPII-SVAWSQKGDRVAFAN-KVGDRWKIFIQDLRSGQV-NSISD 244

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            R    AP FS +G+          + +IY  + Q+  +ERLT   +I+   S+S DS  
Sbjct: 245 VRGYTSAPSFSPDGRYLAYVSSYRNSPEIYLYEFQTGKSERLTRNSYIDTEPSFSADSKS 304

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           IVF S++ G  Q+Y         +R+    +Q+  A Y     S  G  + F      +F
Sbjct: 305 IVFTSEKGGSPQIYRYDLATKRTERLTFEGTQNLRARY-----SSDGKYLVFVHQIDGRF 359

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            I  M       R+L E +  ++P+ +P+G  L+++ ++ G+ G  L  + L+G+
Sbjct: 360 HIASMDLATRDIRVLTETNLDESPSIAPNGTMLVYATQR-GNQGV-LAWVSLDGQ 412


>gi|309750199|gb|ADO80183.1| Outer membrane integrity protein TolB [Haemophilus influenzae
           R2866]
          Length = 427

 Score =  110 bits (276), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/379 (23%), Positives = 171/379 (45%), Gaps = 53/379 (13%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF--QDWNSLGAQVLVTGRVIKEGKD 122
           +S++V+ DL+ S  FN I+     Q   +P S+     + W+++G   +V G+V+  G +
Sbjct: 54  ISKIVADDLRNSGKFNPIAVSQMPQ---HPTSVAEVNPEAWSNIGIDAIVIGQVVPSG-N 109

Query: 123 RLRVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRI 177
              + ++L D        G    +  ++    W R  AHT+SD++++ +T  +G F +RI
Sbjct: 110 GYSITYQLIDTVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRI 169

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++   
Sbjct: 170 AYVVQKN-GGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENK--- 224

Query: 238 RVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           +  L+   ++   +++  +F+    AP FS +G R   +  +D  ++IY +        +
Sbjct: 225 KSQLVVQDLNSGTRKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQ 284

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKEAS 348
           LT+    N   ++SPD + I+F SDR G  Q+Y M ++G            +IS D +  
Sbjct: 285 LTSGAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDASGGSATVVGGRGSAQISADGKTL 344

Query: 349 YF---------------------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                                         P  SP G +I ++   G    + ++  DG 
Sbjct: 345 VMINGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGR 404

Query: 382 -QERLLVEDSNLQAPTWSP 399
            +  L   D  ++ P WSP
Sbjct: 405 FKASLPGSDGQVKFPAWSP 423


>gi|15602832|ref|NP_245904.1| translocation protein TolB [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|32699718|sp|Q9CM71|TOLB_PASMU RecName: Full=Protein tolB; Flags: Precursor
 gi|12721292|gb|AAK03051.1| TolB [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 432

 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 160/370 (43%), Gaps = 49/370 (13%)

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I  +   Q  T+   +   + W +LG   +V G V         + ++L D
Sbjct: 65  LRHSGKFNPIPVNRMPQHPTSVSEV-NPEAWAALGIDAVVVGHVTPA-NGSFNIAYQLVD 122

Query: 133 VKDRKQIIGKKF----FSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                   G       ++  A W R  AHT+SD++++ +TG +G F +RI ++ +    G
Sbjct: 123 TIGATGTAGTVLTQNQYTVTAKWLRYGAHTVSDEVFEKLTGIRGAFRTRIAYIVQKH-GG 181

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q L  P +S + +K+AY +++++   ++ + D    
Sbjct: 182 SQPYEVRVSDYDGFN-QFVVNRSAQPLMSPAWSHDGKKLAYVSFENKK-SQLVVQDLG-S 238

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A K + +F     AP FS +G R   +  KD  ++IY ++L S    +LT+    N   
Sbjct: 239 GARKVVASFNGHNGAPAFSPDGSRLAFASSKDGVLNIYVMNLGSGQISQLTSGTGNNTEP 298

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK---------------------- 345
           S+SPD   IVF SDR G  Q+Y M ++G     +S                         
Sbjct: 299 SWSPDGQTIVFTSDRSGSPQVYQMSASGGGASLVSTGGRSYSGQMTADGSAIIMISRDNI 358

Query: 346 -------------EASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVED 389
                         +++ D  P  SP G +I ++   G    + ++  DG  + RL   D
Sbjct: 359 VKKDLASGSTEVLSSTFLDENPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGND 418

Query: 390 SNLQAPTWSP 399
             ++ P WSP
Sbjct: 419 GQVKFPAWSP 428


>gi|152979449|ref|YP_001345078.1| translocation protein TolB [Actinobacillus succinogenes 130Z]
 gi|171704378|sp|A6VQ96|TOLB_ACTSZ RecName: Full=Protein tolB; Flags: Precursor
 gi|150841172|gb|ABR75143.1| Tol-Pal system beta propeller repeat TolB [Actinobacillus
           succinogenes 130Z]
          Length = 427

 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 172/392 (43%), Gaps = 51/392 (13%)

Query: 50  IAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
           IA   F S   +   ++E+++ DL+ S  FN I  +   Q+  +   +     W SLG  
Sbjct: 41  IAVVPFKSNGSVPADIAEIITADLRNSGKFNPIPVNQMPQQPGSASEVTP-DAWASLGID 99

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDV----KDRKQIIGKKFFSSPASW-RKIAHTISDDIYQ 164
            +V G+V   G +  ++ ++L D      +   ++ +   +    W R  AH +SD++++
Sbjct: 100 AVVVGQVTASG-NGYQIAYQLVDTVGASGNAGAVLAQNSLTVQPKWIRWGAHQVSDEVFE 158

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +TG KG F +RI +V +        + L + D DG N +++     Q +  P +SP+ Q
Sbjct: 159 KMTGIKGAFRTRIAYVVQRNAG---SHELRIADYDGFN-QFVVTRSSQPIMSPAWSPDGQ 214

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++AY ++++     V        R  K +  FR    AP FS +G R   +  +D  ++I
Sbjct: 215 RLAYVSFENRKSQLVVHNLGSGQR--KVVAAFRGHNGAPAFSPDGSRLAFANNQDGLLNI 272

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN---------- 334
           Y ++       +LT     N   S++ D  +I+F SDR G  Q+Y M S+          
Sbjct: 273 YVMNSNGGHPTKLTGGAGNNTEPSWTQD-GRILFTSDRSGSPQVYSMSSSGGGATLIGGG 331

Query: 335 -------GSDQKRI-----------------SQDKEASYFD--PVWSPQGDLIAFTKFSG 368
                   SD K +                 S+   +++ D  P  SP G +I ++   G
Sbjct: 332 RSYSGQMSSDGKTLVMISGDNVVKYDTTTGTSEVLSSTFLDESPSISPNGIMIIYSSTQG 391

Query: 369 EKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
               + ++  DG  + RL   D  ++ P WSP
Sbjct: 392 LGKVLQLVSADGRFKARLPGSDGQVKFPAWSP 423


>gi|149910559|ref|ZP_01899198.1| Periplasmic component of the Tol biopolymer transport system
           [Moritella sp. PE36]
 gi|149806402|gb|EDM66375.1| Periplasmic component of the Tol biopolymer transport system
           [Moritella sp. PE36]
          Length = 441

 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 204/443 (46%), Gaps = 42/443 (9%)

Query: 33  HAFVKV----ATNSANYSPVSIAFTKFVSIDELGGKVSE---VVSKDLQRSDVFNLISQD 85
           HA +++     TNSA   PV++   K++ +      +++   V++ DL+ S  F+ + + 
Sbjct: 7   HAALEIVITEGTNSAR--PVAVVPFKWLGVQPKPKDMTDFASVIADDLRNSGRFSPLERS 64

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV------------ 133
              Q      ++  +  W   G + +V G +      RL++ F+L +V            
Sbjct: 65  LMPQTPATESAV-NYAAWKETGVEAIVIGTIKPLQDGRLQIHFQLINVLSGFKNQTPQKI 123

Query: 134 -------KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
                   D  ++  K  FS+    R I+H +SD I++++TG +G F +RI +V+ +   
Sbjct: 124 DEQLVINNDHIKLNLKGNFSTRRP-RHISHRLSDYIFENLTGTRGAFLTRIAYVAINY-D 181

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L + D DG N   L  S + ++  P + P  +K+AY + +D+    +++ D  +
Sbjct: 182 DKYPFKLLISDYDGMNQHVLFRSTEPVM-SPSWDPTGKKLAYMSMEDKK-HEIWIYDL-V 238

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +  + I  ++   + P FS +G +  + + K    D+Y  DL++   +RLT    I+  
Sbjct: 239 TQKRELIEPYKGSNIFPVFSPDGSKLSMILSKSGQADVYVYDLKTKKLDRLTKNRGIDTE 298

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A+++PD   IVF S+R G+ Q+Y +       KR++ +  A+  +P  SP G  +     
Sbjct: 299 ATWAPDGKSIVFTSERGGRPQIYQINLESKKIKRLTFEGNAN-LNPSISPDGKNLVMVSL 357

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              K+++          + L      ++P+ +P+G  +I+S    G     L S+D  GR
Sbjct: 358 QKGKYSVTKQDLSDGYVQKLTNGRLDKSPSIAPNGSMVIYSTVVKGKQVLSLVSMD--GR 415

Query: 427 NETLINTPAYASD---PQWVGFM 446
            + ++  PA   +   P W  F+
Sbjct: 416 FKAVL--PASDGEVKAPAWSPFL 436


>gi|322435206|ref|YP_004217418.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321162933|gb|ADW68638.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 449

 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 103/405 (25%), Positives = 193/405 (47%), Gaps = 36/405 (8%)

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNS--LGAQVLVTGRV 116
           D L      V+  DL  + +F+++S+    Q      +      W+   + A ++  G +
Sbjct: 57  DALRHTFDTVLYDDLHNAGIFDMVSKSMAPQATPGSPTEINLPQWSGAPVNASMVAFGAL 116

Query: 117 IKEGKDRLRVEFRLWDVKDRK--QIIGKKFF--SSPASWRKIAHTISDDIYQSITG-EKG 171
              G  RL V   L+DVK+ +  Q++ K++   +S  + R+IAH  +D+I   ++G   G
Sbjct: 117 GVTGT-RLAVNGFLFDVKNTQFPQVLAKQYGEEASEDAARQIAHRFADEIILRLSGGTNG 175

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
              ++I FV    + G  K  +  MD DG+N   +T S   +   PR SP+  ++A+++ 
Sbjct: 176 IAETKIYFVH---LDGGNKE-IWEMDYDGSNQHPVT-SLGSVSVSPRVSPDNTRLAFSSL 230

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
             +D  ++ +    ++R            ++P +SS+GK+   S  +    +IY  D   
Sbjct: 231 G-KDGFQIKMFSLLLNRMVSFPAGGGGTNVSPAWSSDGKQLAFSSSRTGDNEIYIADANG 289

Query: 292 NATERLTNTLFINISASYSPDS-SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            ++ R+T+    ++S  ++P S +QI + S R G  QLY M+++GS   R++    A+  
Sbjct: 290 GSSRRITSFAGPDVSPVFNPRSGAQIAWISGRSGLPQLYTMETDGSGVTRLTDGGYAT-- 347

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN------------LQAPTWS 398
            P WSP G  +AF      K+  G     G Q+  ++E ++               P+WS
Sbjct: 348 SPSWSPNGQFLAFAW--NRKYGPGA---PGGQDIYVMEIASKRWIQLTHDMGPCDFPSWS 402

Query: 399 PSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           P GR ++F+   +G  + SK++++  +G +   + T A +  P W
Sbjct: 403 PDGRHIVFANSPNGRASSSKIFTMLADGTDRHAL-TGAGSDMPNW 446


>gi|332974349|gb|EGK11279.1| WD40 domain protein [Psychrobacter sp. 1501(2011)]
          Length = 443

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 184/432 (42%), Gaps = 24/432 (5%)

Query: 18  CLLLVLIGGFFPTSIHA-----FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           C LL   G     S HA          +     +   +AF  F         +S ++ KD
Sbjct: 26  CALLASAGLLVGISAHAEEDYDLELTISKKGEVNQNQVAFVPFAGDS----GISSIIQKD 81

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+      + SQ    Q  +  D       W  LG   +V G     G +   + F + +
Sbjct: 82  LEAMP-LRVTSQGLIGQPHSRDDLAATLPAWQQLGIPYMVIGSSQNVGGN-ASITFEVIE 139

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V   + I G +  ++ A  +  A   S  IY+ ITG+K D N+R+++V E        +S
Sbjct: 140 VAKGRIIKGTQTVTA-ADSKTAARKASSRIYELITGKKLDLNARLIYVEEKGSGKSKTSS 198

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L ++D DG+N R L+   D  ++ P  SP+ + VAY+    ++   ++  D +  +   R
Sbjct: 199 LVLIDADGSNKRLLSQVIDATIYSPAVSPDGRYVAYSVQLKDNSANLWKYDLKTSQL-TR 257

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + + +   L P FS +G + L S   +   DIY V+      E +    +  ++ SY+P+
Sbjct: 258 LVDMKGSSLRPSFSYDGSKILFSSTVNGDADIYRVNSTGGKPELVMAGPYDQVTPSYAPN 317

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            S  V+ SD     +  + + N S    +IS+   A+  +P +SP G  I F   SG   
Sbjct: 318 GS-FVYASDHASPNRPNIYRYNFSGSPVQISRGGYAT--NPSYSPDGTKIGF--LSGRSA 372

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           AI  M  +GS           +AP +SP+G  +++S+   G     L    L+G     +
Sbjct: 373 AI--MSNNGSIIANFGATGLDEAPRFSPTGERVVYSQ---GAKKGNLVIRYLDGGKVITL 427

Query: 432 NTPAYASDPQWV 443
            T   A  P WV
Sbjct: 428 PTDGIAKSPTWV 439


>gi|320107208|ref|YP_004182798.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319925729|gb|ADV82804.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
          Length = 444

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/389 (26%), Positives = 181/389 (46%), Gaps = 43/389 (11%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW--NSLGAQVLVTGRV-IKEGKDRL 124
           V+  DL ++ +F+L+S+    Q      S      W  N   A ++  G + IK G  RL
Sbjct: 64  VLYADLAQAGIFDLVSKSLLPQLTPGAPSEMNVTQWSANPTNAAMVAFGSLGIKSG--RL 121

Query: 125 RVEFRLWDVKDRK--QIIGKKFF--SSPASWRKIAHTISDDIYQSITGE-KGDFNSRILF 179
            V   L+D K+ +  Q++GK++   ++  S R+IAH  +D+I   + G   G   ++I++
Sbjct: 122 IVNGWLFDAKNTQYPQVLGKQYAEDANDNSAREIAHKFADEIILRLGGGIPGIAETKIVY 181

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LR 238
           V      G     + +MD DGAN   +T     +   PR SP+  ++A+++   E   +R
Sbjct: 182 VH----GGSGSKEIWMMDYDGANPHPVT-HLGTVSLSPRISPDNSRIAFSSLGREGFQIR 236

Query: 239 VY-LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           V+ L+  R+   P   G      L+P +S+NG +   S  +    +I+  D   +   R+
Sbjct: 237 VFSLLLNRMIAFPAAAGTN----LSPAWSANGAQIAYSSSRSGDPEIWIADSNGSGPRRV 292

Query: 298 TNTLFINISASYSPDS-SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           T+    ++S  ++P + SQI + S R G  QLY M ++G+   R++    A+   P WSP
Sbjct: 293 TSFRGPDVSPVWNPKTGSQIAWISGRTGLPQLYTMDADGAGVTRMTDGGYAT--SPSWSP 350

Query: 357 QGDLIAFTKFSGEKFAIG--------VMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFS 407
            G  + F      K+  G        VM+    +   L  D+     P+WSP GR ++++
Sbjct: 351 NGQFLTFAW--DRKYGPGAPGGQDIYVMEIASKRWIQLTHDTGRCDFPSWSPDGRHIVYA 408

Query: 408 RKKDG--------DTGSKLYSIDLNGRNE 428
               G          G++ + +  NG N+
Sbjct: 409 SNAGGRWEIWTMLADGTQRHKLSTNGAND 437


>gi|325579033|ref|ZP_08148989.1| tol-Pal system beta propeller repeat protein TolB [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159268|gb|EGC71402.1| tol-Pal system beta propeller repeat protein TolB [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 427

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 165/376 (43%), Gaps = 47/376 (12%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           + ++V+ DL+ S  FN I      Q+ T    + + + W +LG   +V G+V   G    
Sbjct: 54  IGQIVADDLRNSGKFNPIPVSQMPQQPTTAAEV-KPEAWTALGIDAVVVGQVTSTGSG-Y 111

Query: 125 RVEFRLWDV----KDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D          ++ +  ++    W R  AHT+SD++++ +TG +G F +RI +
Sbjct: 112 NISYQLVDTVGASGTPGAVLAQNSYTVTNKWLRYGAHTVSDEVFEKLTGIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ +++AY +++++    V
Sbjct: 172 VVQKN-GGSQPYEVRVADYDGYN-QFIVNRSSQPIMSPAWSPDGKRLAYVSFENKKSQLV 229

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                   R  K + +F     AP FS +G +   +  +D  ++IY +        +LT 
Sbjct: 230 VQDLGSGSR--KVVASFPGHNGAPAFSPDGSKLAFASSQDGLLNIYVMGSNGGTPTQLTR 287

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG---------------SDQKR---- 340
               N   S+SPD S I+F SDR G  Q+Y M ++G               SD K     
Sbjct: 288 GAGNNTEPSWSPDGSSILFTSDRSGSPQVYRMSASGGGASPVGGRGSAQISSDGKTLVMI 347

Query: 341 ------ISQDKEASYFD----------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QE 383
                 + QD  +   +          P  SP G +I ++   G    + ++  DG  + 
Sbjct: 348 NGNNNVVKQDLTSGSSEVLSTSFLGESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKA 407

Query: 384 RLLVEDSNLQAPTWSP 399
            L   +  ++ P WSP
Sbjct: 408 SLPGSNGQVKFPAWSP 423


>gi|301155738|emb|CBW15206.1| periplasmic protein [Haemophilus parainfluenzae T3T1]
          Length = 427

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 165/376 (43%), Gaps = 47/376 (12%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           + ++V+ DL+ S  FN I      Q+ T    + + + W +LG   +V G+V   G    
Sbjct: 54  IGQIVADDLRNSGKFNPIPVSQMPQQPTTAAEV-KPEAWTALGIDAVVVGQVTSTGSG-Y 111

Query: 125 RVEFRLWDV----KDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D          ++ +  ++    W R  AHT+SD++++ +TG +G F +RI +
Sbjct: 112 NISYQLVDTVGASGTPGAVLAQNSYTVTNKWLRYGAHTVSDEVFEKLTGIRGAFRTRIAY 171

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ +++AY +++++    V
Sbjct: 172 VVQKN-GGSQPYEVRVADYDGYN-QFIVNRSSQPIMSPAWSPDGKRLAYVSFENKKSQLV 229

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                   R  K + +F     AP FS +G +   +  +D  ++IY +        +LT+
Sbjct: 230 VQDLGSGSR--KVVASFPGHNGAPAFSPDGSKLAFASSQDGLLNIYVMSSNGGKPTQLTS 287

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS--------DQKRISQDKE----- 346
               N   S+SPD S I+F SDR G  Q+Y M ++G            +IS D +     
Sbjct: 288 GAGNNTEPSWSPDGSSILFTSDRSGSPQVYRMSASGGGASPVGGRGSAQISSDGKTLVMI 347

Query: 347 --------------------ASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QE 383
                                S+    P  SP G +I ++   G    + ++  DG  + 
Sbjct: 348 NGNNNVVKQDLTTGSSEVLSTSFLGESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKA 407

Query: 384 RLLVEDSNLQAPTWSP 399
            L   +  ++ P WSP
Sbjct: 408 SLPGSNGQVKFPAWSP 423


>gi|226227348|ref|YP_002761454.1| hypothetical protein GAU_1942 [Gemmatimonas aurantiaca T-27]
 gi|226090539|dbj|BAH38984.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 420

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 168/388 (43%), Gaps = 44/388 (11%)

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  ++ +VS+DL  SD F ++S  S        +    +  +  LG   +V   ++  G 
Sbjct: 48  GDSIARMVSRDLDFSDRFTIVSSSSAPAV----NGAINYALFTKLGVDGIVQATLLPSGW 103

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSP-----ASWRKIAHTISDDIYQSITGEKGDFNSR 176
               V   L DV   K +   + F  P     A+WR   H +SD + + ITG +G   +R
Sbjct: 104 ----VRVALHDVG-LKNVKNSRDFPLPTPALSATWRLAVHGVSDGVEEWITGARGIAQTR 158

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           + F     V          +D DGAN+  +TPS       P++ P+ + + Y+  D    
Sbjct: 159 VAFTRGGRV--------WTIDSDGANVTAVTPSG----MSPQWLPSGRGIVYSVLDG--- 203

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +R  +M T +    +R+      +    P  S +G+  + +   D   D+Y   +     
Sbjct: 204 VRNPIMLTDLSTGAQRVLASAQGVEHTTPIVSPDGRTVVYARGSDTGTDLYQQSMDGGTP 263

Query: 295 ERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-- 351
            R+T      +  AS+SPD  ++ F SDR G  ++Y+   +G++ + ++    A++ D  
Sbjct: 264 RRITVGRGRASAQASFSPDGQRLAFMSDRSGHPEVYISDLDGTNTELLT---AAAFGDRD 320

Query: 352 ----PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
               P WSP G L+AF   +G  F I  +       + +  D     P+W+P  R ++F+
Sbjct: 321 YRAGPDWSPDGRLVAFQSRNGGTFQIMTINLRDQSVKQVTNDGRNDDPSWAPDSRHVVFT 380

Query: 408 RKKDGDTGSKLYSIDL-NGRNETLINTP 434
             + G    +L+ +D   GR   L   P
Sbjct: 381 STRSGT--RQLWIVDTETGRTRQLTFGP 406


>gi|294056510|ref|YP_003550168.1| WD40 domain protein beta Propeller [Coraliomargarita akajimensis
           DSM 45221]
 gi|293615843|gb|ADE55998.1| WD40 domain protein beta Propeller [Coraliomargarita akajimensis
           DSM 45221]
          Length = 390

 Score =  108 bits (270), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 118/241 (48%), Gaps = 11/241 (4%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFRSM 259
            N++ LT  R  ++  P +SPN +K+ Y TY       +Y+MD  +  R P  I  F+  
Sbjct: 148 GNVKSLTSDR-ALVTGPSWSPNGRKLVYTTYKG-GFPDIYMMDFDQRRRVP--IATFKGT 203

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
               RFS +G R  +++      +I+  D Q     RLT    +  S S+SPD  ++VF 
Sbjct: 204 NTGARFSPDGSRIAMTLSSTGNSEIWVTDQQGKNGRRLTKNKSLEASPSWSPDGRRLVFT 263

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-GDLIAFTKFSGEKFAIGVM-- 376
           SD  GK QLY + +NG   +R+  +      +P W+PQ G  IAFT   G  F + V   
Sbjct: 264 SDSFGKPQLYEISANGGPMRRVPTNVSRYCAEPAWNPQKGHQIAFTAAVGGGFQVFVYDS 323

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           ++ GS +   V    ++ P W   GR LIF+++  G    +L  +D   +  + ++TP +
Sbjct: 324 QQGGSTQVTSVAGDAIE-PCWLNDGRHLIFTQRSGGKM--RLMLVDTESKKVSSLHTPNF 380

Query: 437 A 437
            
Sbjct: 381 G 381


>gi|241667262|ref|ZP_04754840.1| group A colicin translocation; TolB protein [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
          Length = 434

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 188/403 (46%), Gaps = 39/403 (9%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ ++  DL  +    L   DS K +I    +IP    W SL +  +V  +  
Sbjct: 44  VDQFPQQVNSIIVSDLNHNG--KLQGDDSIKYEINQSQNIP----WKSLKSDYVVLTKYT 97

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSR 176
           K+  +   +E +++   D   I    + + S    R +AH +++ +YQ +TGE+G F ++
Sbjct: 98  KDSNNSYTIEVQIYKRNDTSYIRSITYKNISTTLVRPLAHKVANYVYQKLTGEQGFFLTK 157

Query: 177 ILFVSES---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +V  S      G I   L + D DG N   +    D  +  P +S + + + Y++Y  
Sbjct: 158 LAYVQVSNPYARYGRIY-ELVISDYDGYNKHTVLRQSDNPIATPSWSNDGRYIVYSSYSG 216

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
              + VY ++    +   RI NF+ +  +P FS NGK   +++ K   +  +IY ++L +
Sbjct: 217 GS-MGVYTLEIATGKV-TRISNFKGINSSPSFSPNGKEIALALSKGYSDQTNIYILNLAT 274

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-- 349
            A +R+T    IN +  +SP+   IVF SDR+G+  +YV   N     R  Q  + S   
Sbjct: 275 KALKRIT-INGINTAPKFSPNGQSIVFTSDRDGRPNIYVAPVN----SRYPQSSKLSSRI 329

Query: 350 ---FDPVWSPQGDLIAF---TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
              ++P ++P G  I F   ++ SG + A      +GS   +    S+  +PT SP G  
Sbjct: 330 YQGYEPNYTPDGKDIVFMNQSRSSGTQIA-DFNLANGSVTNITNGKSD-SSPTVSPFGNM 387

Query: 404 LIF-SRKKDGDT--------GSKLYSIDLNGRNETLINTPAYA 437
           + + S    G +        G   +++D       LI +P+++
Sbjct: 388 IAYISTNSRGYSSLDMVSLDGDNHFNVDTANNGNILIQSPSWS 430


>gi|254875813|ref|ZP_05248523.1| TolB protein [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254841834|gb|EET20248.1| TolB protein [Francisella philomiragia subsp. philomiragia ATCC
           25015]
          Length = 438

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 188/403 (46%), Gaps = 39/403 (9%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ ++  DL  +    L   DS K +I    +IP    W SL +  +V  +  
Sbjct: 48  VDQFPQQVNSIIVSDLNHNG--KLQGDDSIKYEINQSQNIP----WKSLKSDYVVLTKYT 101

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSR 176
           K+  +   +E +++   D   I    + + S    R +AH +++ +YQ +TGE+G F ++
Sbjct: 102 KDSNNSYTIEVQIYKRNDTSYIRSITYKNISTTLVRPLAHKVANYVYQKLTGEQGFFLTK 161

Query: 177 ILFVSES---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +V  S      G I   L + D DG N   +    D  +  P +S + + + Y++Y  
Sbjct: 162 LAYVQVSNPYARYGRIY-ELVISDYDGYNKHTVLRQSDNPIATPSWSNDGRYIVYSSYSG 220

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
              + VY ++    +   RI NF+ +  +P FS NGK   +++ K   +  +IY ++L +
Sbjct: 221 GS-MGVYTLEIATGKV-TRISNFKGINSSPSFSPNGKEIALALSKGYSDQTNIYILNLAT 278

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-- 349
            A +R+T    IN +  +SP+   IVF SDR+G+  +YV   N     R  Q  + S   
Sbjct: 279 KALKRIT-INGINTAPKFSPNGQSIVFTSDRDGRPNIYVAPVN----SRYPQSSKLSSRI 333

Query: 350 ---FDPVWSPQGDLIAF---TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
              ++P ++P G  I F   ++ SG + A      +GS   +    S+  +PT SP G  
Sbjct: 334 YQGYEPNYTPDGKDIVFMNQSRSSGTQIA-DFNLANGSVTNITNGKSD-SSPTVSPFGNM 391

Query: 404 LIF-SRKKDGDT--------GSKLYSIDLNGRNETLINTPAYA 437
           + + S    G +        G   +++D       LI +P+++
Sbjct: 392 IAYISTNSRGYSSLDMVSLDGDNHFNVDTANNGNILIQSPSWS 434


>gi|160872498|ref|ZP_02062630.1| Tol-Pal system beta propeller repeat protein TolB [Rickettsiella
           grylli]
 gi|159121297|gb|EDP46635.1| Tol-Pal system beta propeller repeat protein TolB [Rickettsiella
           grylli]
          Length = 451

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 187/395 (47%), Gaps = 28/395 (7%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ--DWNSLGAQVLVTGRVIKEGKD 122
           +S+V+  DL  S  F +   +  +Q +  P ++ +     W +     +V G++   G  
Sbjct: 70  ISQVIESDLNHSGQFKVTIAN--RQALPQPYTLDKISIPYWRAQHIDDVVRGKITSMGHG 127

Query: 123 RLRVEFRLWDV-KDRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
           R RV   +  V + RKQI+     +      R   H +SD IY+ +TG +G F++RI ++
Sbjct: 128 RYRVYMDVVHVAQGRKQILTHTELTVRDTQLRAFGHHLSDLIYEKLTGVRGIFSTRIAYI 187

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL-RV 239
             +         L + D DG N + L  S   I+  P +S + +++AY ++  E I+ R+
Sbjct: 188 LVTRQKNHRVYRLQIADMDGHNAKSLLTSTQPIM-SPSWSHDGKRIAYVSF--EKIMPRI 244

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLT 298
           Y+      +  + I ++  +  AP +S + K+  +++ K+ A   IY ++L++    +++
Sbjct: 245 YIQTIATGQR-QVISDYPGINGAPAWSPDDKKLALALSKNSAAPKIYFINLENKRLSQVS 303

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVW 354
               I+   ++S D   ++F SDR G  Q+Y +  NG   +RI    S +  ASY     
Sbjct: 304 FGFSIDTEPTWSQDGKSLLFTSDRGGGPQIYQINLNGKQLQRITFDGSYNARASY----- 358

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQA-PTWSPSGRSLIFSRKKDG 412
           SP G +I         + I V  +D   + L  V  S  +A P++SP+G+ ++F  K D 
Sbjct: 359 SPDGKMIVVLNRDQGMYNIAV--QDLEDDTLFSVTHSGYEASPSFSPNGQMILFESKPDK 416

Query: 413 DTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFM 446
                + S+D  GR    + TP     DP W  F+
Sbjct: 417 RGLLGMASVD--GRINCRLPTPEGDVQDPVWSPFL 449


>gi|328675514|gb|AEB28189.1| tolB protein precursor [Francisella cf. novicida 3523]
          Length = 435

 Score =  107 bits (268), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 199/441 (45%), Gaps = 38/441 (8%)

Query: 22  VLIGGFFPTSIHA-FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFN 80
           VLI  F  +S++A  V   T      P+    +  V +D+   +V+ V+  DL  +    
Sbjct: 8   VLIFVFLISSLYADLVAEVTTGVIQKPLVTVVSDNV-VDQFPQQVNSVIVADLNHNA--K 64

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
           L   D+ K +I    +IP    W SL +  +V  +  K   +   VE ++    D   + 
Sbjct: 65  LQGNDTIKYEIKQKQNIP----WKSLKSDYVVLTKYTKNSYNNYTVEVQILKRNDTSYLQ 120

Query: 141 GKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSES---VVSGIIKNSLCVM 196
              + +   S  R +AH IS+ +Y  +TGE+G F S++ +V  S      G +   L + 
Sbjct: 121 AITYKNINISLMRTLAHKISNYVYHKLTGEQGFFLSKLAYVKVSNPYARYGRLY-ELIIS 179

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D DG N   +    D  +  P +S + + + Y++Y     + VY ++    +   RI N+
Sbjct: 180 DYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYSGGS-MGVYTLEIATGKV-TRITNY 237

Query: 257 RSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           + +  +P FS +GK   +++ K   +  +IY ++L + A +R+T    IN +  +SP+  
Sbjct: 238 KGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLATKALKRIT-INGINTAPKFSPNGQ 296

Query: 315 QIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAF----TKFSGE 369
            IVF SDREG+  +YV   N    Q  I   K    ++P ++P G  I F    ++ SG 
Sbjct: 297 SIVFTSDREGRPNIYVASVNSKYPQSSILSTKIYQAYEPNYTPDGKNIVFMNQSSRTSGT 356

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS----IDLNG 425
           + A      +GS   +    S+  +PT SP G  + +       T ++ YS    + L+G
Sbjct: 357 QIA-DFNLANGSVTNITNGKSD-SSPTVSPYGDMIAYI-----STNTRGYSSLDMVSLDG 409

Query: 426 RN----ETLINTPAYASDPQW 442
            N    ET  N       P W
Sbjct: 410 DNHFNIETANNGNILIQSPSW 430


>gi|261414610|ref|YP_003248293.1| TolB domain protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261371066|gb|ACX73811.1| TolB domain protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302325965|gb|ADL25166.1| tol-pal system beta propeller repeat protein TolB [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 424

 Score =  107 bits (266), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 82/346 (23%), Positives = 161/346 (46%), Gaps = 22/346 (6%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
           A+  VTG   K    +++++  L+  + +  ++G+ +   P   R+  H+  D +   + 
Sbjct: 90  ARQYVTGTATKLSNGKIKLDCYLYAAETKDVLLGESYTVKPYDVRQAVHSFFDKVVYRLF 149

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKV 226
           GE+G  ++++ +VS+  + G+    + + D DG + R +T  RD  I   P +    + +
Sbjct: 150 GERGVASTKLAYVSK--IDGV--KQVVISDYDGFSRRQIT--RDSSINMMPVWQKGNKGL 203

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y  +  +   R  L           +        +P  +      L SV +    ++Y 
Sbjct: 204 VYVNFRKQ---RPNLYAITFGGKETPLFTQFKQTFSPAVNPKTGELLFSVTEGAKTELYR 260

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---- 342
            D+++ + ++  +     +S S+SP +S+++F SDR G  Q+Y +  +G+D +RI+    
Sbjct: 261 GDMKTGSAQKFLHLKSNQVSPSWSPFASEVLFTSDRGGSPQVYAVGKDGTDVRRITYMGH 320

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSG 401
            ++ AS     WSP+GD I +T     K  I     DG+    L  ++ N + PTWSP G
Sbjct: 321 YNERAS-----WSPEGDRIVYTSMDDGKMNIYTCALDGTDIIQLTSNAGNNEHPTWSPDG 375

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           + + F+  + G+   ++Y +  +G   T I   +  + P W  F D
Sbjct: 376 KLIAFASDRGGN--YQIYIMRKDGSGVTRITNGSENTSPTWSWFFD 419


>gi|256823065|ref|YP_003147028.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Kangiella koreensis DSM 16069]
 gi|256796604|gb|ACV27260.1| Tol-Pal system beta propeller repeat protein TolB [Kangiella
           koreensis DSM 16069]
          Length = 454

 Score =  106 bits (264), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 103/431 (23%), Positives = 193/431 (44%), Gaps = 45/431 (10%)

Query: 47  PVSIAFTKFVSIDELGGK----VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           P+++   KF S   + G+     +++++ DL+RS  FN        Q   + D +   ++
Sbjct: 37  PIAVVPFKFESESAVQGQPPFDFAKIIADDLRRSGKFNPTEISKLPQHPYSIDQV-NLEE 95

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS-----PAS------- 150
           W  LG   +V G V +       V + L D  + K I             P+S       
Sbjct: 96  WRKLGVDGVVYGTVSQTASGNYMVSYDLIDPFNDKAIFSADIEDGSYPLIPSSSHLMVLK 155

Query: 151 --------WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
                   +R  AH  +D+IY+++TGE+G F ++I +V E   +      L V D DG N
Sbjct: 156 TKVVDNDNFRWGAHIAADEIYEALTGERGAFATQIAYV-EVNRNDPRPYQLFVADSDGFN 214

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMIL 261
            + +  SR  I+  P +SP+  +++Y T+++    R  ++   I    + I  +++    
Sbjct: 215 GKRIFASRSPIM-SPTWSPDSSQLSYVTFENG---RSEIVIQDIASGQREIVASYKGFNS 270

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP +S +G + ++ + KD   ++Y ++L +   +RLT    I+   S++PD   ++F SD
Sbjct: 271 APAWSPDGSKMVVVLSKDGNPELYLLELATKQLQRLTRHYAIDTEPSWAPDGKSLIFTSD 330

Query: 322 REGKEQLYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           R G+ Q+Y ++       R++     +  A +     +P G  I     +   + I    
Sbjct: 331 RGGRPQIYRIRLADKKVDRVTFEGIHNAGAEF-----TPDGKSIVMVHQANGSYHIAAQD 385

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS-IDLNGR-NETLINTPA 435
               Q  +L + +  ++ + +P+G  +IFS     D G K+ S + ++GR    L  T  
Sbjct: 386 LVTGQLTVLTKTTLDESLSIAPNGSMIIFSTV---DGGQKVLSAVSMDGRFKARLPATVG 442

Query: 436 YASDPQWVGFM 446
               P W  F+
Sbjct: 443 EVKAPAWSPFI 453


>gi|289804344|ref|ZP_06534973.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 285

 Score =  106 bits (264), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 134/287 (46%), Gaps = 47/287 (16%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++     Q L 
Sbjct: 1   HTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLM 58

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS +G +   +
Sbjct: 59  SPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGTKLAFA 116

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y M  NG
Sbjct: 117 LSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQVYKMNING 176

Query: 336 SDQKRI----SQDKEA------------------------------------SYFD--PV 353
              +RI    SQ+++A                                    ++ D  P 
Sbjct: 177 GAAQRITWEGSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSSTFLDETPS 236

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
            +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 237 LAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 283


>gi|168699850|ref|ZP_02732127.1| WD40 domain protein beta Propeller [Gemmata obscuriglobus UQM 2246]
          Length = 294

 Score =  106 bits (264), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 120/243 (49%), Gaps = 18/243 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K +L +M   G  ++ L P   +  F+  +SP+  ++ Y  YD  +     L   RID  
Sbjct: 60  KMALWIMPAAGGEMKRLLPGHTEPHFDGHYSPDGTRIVY-VYDKLEGTDGKL---RIDVC 115

Query: 250 PKRIGNFRSMIL------APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                + +++I       +PRFS +GK  L    +++  D+Y+V        RLTN    
Sbjct: 116 AADGSDNQTLIPHKAFEESPRFSPDGKTVLWVSTRNKNPDLYAVTAGGKGERRLTNDPAY 175

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLI 361
           ++  ++SPD  ++ F S R G+++++VM ++G+  ++++   +  + D  PVW P G+ I
Sbjct: 176 DLHPAWSPDGKRVAFASGRSGRQKIHVMSADGTGVQKLT---DGEFLDSWPVWHPDGERI 232

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           AF       + I +M  DG   R L    +   +P W+P G+ L F   + G  GS +Y 
Sbjct: 233 AFASNRSGNYDIWLMTADGKALRNLTGHKAQDTSPAWAPDGKKLAFVSTRGG--GSDIYV 290

Query: 421 IDL 423
           +D+
Sbjct: 291 LDV 293



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 12/159 (7%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           NA  RLT       +  +SPD   ++     EGK  L++M + G + KR+       +FD
Sbjct: 27  NAPVRLTKDGSFKQNVQWSPDGKTLLLTRIHEGKMALWIMPAAGGEMKRLLPGHTEPHFD 86

Query: 352 PVWSPQGDLIAFT--KFSGE--KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIF 406
             +SP G  I +   K  G   K  I V   DGS  + L+      ++P +SP G+++++
Sbjct: 87  GHYSPDGTRIVYVYDKLEGTDGKLRIDVCAADGSDNQTLIPHKAFEESPRFSPDGKTVLW 146

Query: 407 --SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQW 442
             +R K+ D    LY++   G+ E  L N PAY   P W
Sbjct: 147 VSTRNKNPD----LYAVTAGGKGERRLTNDPAYDLHPAW 181



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/213 (23%), Positives = 93/213 (43%), Gaps = 18/213 (8%)

Query: 247 DRAPKRI---GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLF 302
           + AP R+   G+F+  +   ++S +GK  L++   +  M ++ +       +RL      
Sbjct: 26  ENAPVRLTKDGSFKQNV---QWSPDGKTLLLTRIHEGKMALWIMPAAGGEMKRLLPGHTE 82

Query: 303 INISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +    YSPD ++IV+  D+    +GK ++ V  ++GSD + +   K A    P +SP G
Sbjct: 83  PHFDGHYSPDGTRIVYVYDKLEGTDGKLRIDVCAADGSDNQTLIPHK-AFEESPRFSPDG 141

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSK 417
             + +     +   +  +   G  ER L  D      P WSP G+ + F+  + G     
Sbjct: 142 KTVLWVSTRNKNPDLYAVTAGGKGERRLTNDPAYDLHPAWSPDGKRVAFASGRSGRQKIH 201

Query: 418 LYSIDLNG-----RNETLINTPAYASDPQWVGF 445
           + S D  G       E L + P +  D + + F
Sbjct: 202 VMSADGTGVQKLTDGEFLDSWPVWHPDGERIAF 234


>gi|208780417|ref|ZP_03247758.1| TolB amino- domain family protein [Francisella novicida FTG]
 gi|208743785|gb|EDZ90088.1| TolB amino- domain family protein [Francisella novicida FTG]
          Length = 439

 Score =  105 bits (263), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 185/404 (45%), Gaps = 36/404 (8%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ V+  DL  +    L + D+ K +I    +IP    W SL +  +V  +  
Sbjct: 48  VDQFPQQVNSVIVADLNHNA--KLQANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYT 101

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSR 176
           K   +   VE ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F ++
Sbjct: 102 KNAYNNYTVEVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTK 161

Query: 177 ILFVSES---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +V  S      G +   L + D DG N   +    D  +  P +S + + + Y++Y  
Sbjct: 162 LAYVKVSNPYARYGRLY-ELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYSG 220

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
              + VY ++    +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L +
Sbjct: 221 GS-MGVYTLEIATGKV-TRITNYKGINSSPSFSPDGKEIALALSKGYSDKTNIYIMNLAT 278

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYF 350
            A +R+T    IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    +
Sbjct: 279 KALKRIT-INGINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAY 337

Query: 351 DPVWSPQGDLIAF----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           +P ++P G  I F    ++ SG + A      +GS   +    ++  +PT SP G  + +
Sbjct: 338 EPNYTPDGKNIVFMNQSSRTSGTQIA-DFNLANGSVTNITNGKAD-SSPTVSPYGDMVAY 395

Query: 407 SRKKDGDTGSKLYS----IDLNGRN----ETLINTPAYASDPQW 442
                  T ++ YS    + L+G N    ET  N       P W
Sbjct: 396 I-----STNTRGYSSLDMVSLDGDNHFNIETADNGNILIQSPSW 434


>gi|153826263|ref|ZP_01978930.1| tolB protein [Vibrio cholerae MZO-2]
 gi|149740028|gb|EDM54203.1| tolB protein [Vibrio cholerae MZO-2]
          Length = 328

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 152/318 (47%), Gaps = 13/318 (4%)

Query: 133 VKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG--II 189
           V  +  ++  K  + PAS  R+ AH I+D +Y+ +TGE+G F +RI +V   VV+     
Sbjct: 20  VLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGAFLTRIAYV---VVNDKDPY 76

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L + D DG N R +  S+ Q L  P +SP+ Q +AY ++ +     +Y+M+    + 
Sbjct: 77  PYQLRIADYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYVSFQNGQA-EIYMMNIYSGKR 134

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K + +F     APRFS +GK   + + K   + +Y++DL +     +T+    N    +
Sbjct: 135 EK-LTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLTEVTSGRSNNTEPFW 193

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PD   ++F SDR GK Q+Y +  +G + KR++     +    + +P G  +     S  
Sbjct: 194 HPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLGGQI-TPDGKFLVMVNRSDS 252

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NE 428
            F +     +    ++L +    ++P+ +P+G  +I+S   +      + SID  GR   
Sbjct: 253 GFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYNKANVLSMVSID--GRFKA 310

Query: 429 TLINTPAYASDPQWVGFM 446
            L  T      P W  F+
Sbjct: 311 RLPATNGRVRAPAWSPFL 328


>gi|118496965|ref|YP_898015.1| group A colicin translocation; tolB protein [Francisella tularensis
           subsp. novicida U112]
 gi|194324194|ref|ZP_03057968.1| TolB amino- domain family protein [Francisella tularensis subsp.
           novicida FTE]
 gi|166988077|sp|A0Q4U6|TOLB_FRATN RecName: Full=Protein tolB; Flags: Precursor
 gi|118422871|gb|ABK89261.1| group A colicin translocation; tolB protein [Francisella novicida
           U112]
 gi|194321641|gb|EDX19125.1| TolB amino- domain family protein [Francisella tularensis subsp.
           novicida FTE]
          Length = 435

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 185/404 (45%), Gaps = 36/404 (8%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ V+  DL  +    L + D+ K +I    +IP    W SL +  +V  +  
Sbjct: 44  VDQFPQQVNSVIVADLNHNA--KLQANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYT 97

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSR 176
           K   +   VE ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F ++
Sbjct: 98  KNAYNNYTVEVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTK 157

Query: 177 ILFVSES---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +V  S      G +   L + D DG N   +    D  +  P +S + + + Y++Y  
Sbjct: 158 LAYVKVSNPYARYGRLY-ELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYSG 216

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
              + VY ++    +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L +
Sbjct: 217 GS-MGVYTLEIATGKV-TRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLAT 274

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYF 350
            A +R+T    IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    +
Sbjct: 275 KALKRIT-INGINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAY 333

Query: 351 DPVWSPQGDLIAF----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           +P ++P G  I F    ++ SG + A      +GS   +    ++  +PT SP G  + +
Sbjct: 334 EPNYTPDGKNIVFMNQSSRTSGTQIA-DFNLANGSVTNITNGKAD-SSPTVSPYGDMVAY 391

Query: 407 SRKKDGDTGSKLYS----IDLNGRN----ETLINTPAYASDPQW 442
                  T ++ YS    + L+G N    ET  N       P W
Sbjct: 392 I-----STNTRGYSSLDMVSLDGDNHFNIETADNGNILIQSPSW 430


>gi|254373809|ref|ZP_04989292.1| TolB protein precursor [Francisella novicida GA99-3548]
 gi|151571530|gb|EDN37184.1| TolB protein precursor [Francisella novicida GA99-3548]
          Length = 439

 Score =  105 bits (262), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 185/404 (45%), Gaps = 36/404 (8%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ V+  DL  +    L + D+ K +I    +IP    W SL +  +V  +  
Sbjct: 48  VDQFPQQVNSVIVADLNHNA--KLQANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYT 101

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSR 176
           K   +   VE ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F ++
Sbjct: 102 KNAYNNYTVEVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTK 161

Query: 177 ILFVSES---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +V  S      G +   L + D DG N   +    D  +  P +S + + + Y++Y  
Sbjct: 162 LAYVKVSNPYARYGRLY-ELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYSG 220

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
              + VY ++    +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L +
Sbjct: 221 GS-MGVYTLEIATGKV-TRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLAT 278

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYF 350
            A +R+T    IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    +
Sbjct: 279 KALKRIT-INGINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAY 337

Query: 351 DPVWSPQGDLIAF----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           +P ++P G  I F    ++ SG + A      +GS   +    ++  +PT SP G  + +
Sbjct: 338 EPNYTPDGKNIVFMNQSSRTSGTQIA-DFNLANGSVTNITNGKAD-SSPTVSPYGDMVAY 395

Query: 407 SRKKDGDTGSKLYS----IDLNGRN----ETLINTPAYASDPQW 442
                  T ++ YS    + L+G N    ET  N       P W
Sbjct: 396 I-----STNTRGYSSLDMVSLDGDNHFNIETADNGNILIQSPSW 434


>gi|254372335|ref|ZP_04987826.1| TolB protein precursor [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570064|gb|EDN35718.1| TolB protein precursor [Francisella novicida GA99-3549]
          Length = 439

 Score =  105 bits (261), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 185/404 (45%), Gaps = 36/404 (8%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ V+  DL  +    L + D+ K +I    +IP    W SL +  +V  +  
Sbjct: 48  VDQFPQQVNSVIVADLNHNA--KLQANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYT 101

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSR 176
           K   +   VE ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F ++
Sbjct: 102 KNSYNNYTVEVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTK 161

Query: 177 ILFVSES---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +V  S      G +   L + D DG N   +    D  +  P +S + + + Y++Y  
Sbjct: 162 LAYVKVSNPYARYGRLY-ELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYSG 220

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
              + VY ++    +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L +
Sbjct: 221 GS-MGVYTLEIATGKV-TRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLAT 278

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYF 350
            A +R+T    IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    +
Sbjct: 279 KALKRIT-INGINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAY 337

Query: 351 DPVWSPQGDLIAF----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           +P ++P G  I F    ++ SG + A      +GS   +    ++  +PT SP G  + +
Sbjct: 338 EPNYTPDGKNIVFMNQSSRTSGTQIA-DFNLANGSVTNITNGKAD-SSPTVSPYGDMVAY 395

Query: 407 SRKKDGDTGSKLYS----IDLNGRN----ETLINTPAYASDPQW 442
                  T ++ YS    + L+G N    ET  N       P W
Sbjct: 396 I-----STNTRGYSSLDMVSLDGDNHFNIETADNGNILIQSPSW 434


>gi|328676439|gb|AEB27309.1| tolB protein precursor, periplasmic protein involved in the
           tonb-independent uptake of group A colicins [Francisella
           cf. novicida Fx1]
          Length = 435

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 185/404 (45%), Gaps = 36/404 (8%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ V+  DL  +    L + D+ K +I    ++P    W SL +  +V  +  
Sbjct: 44  VDQFPQQVNSVIVADLNHNA--KLQANDTIKYEIKQKQNVP----WKSLKSDYVVLTKYT 97

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSR 176
           K   +   VE ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F ++
Sbjct: 98  KNSYNNYTVEVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTK 157

Query: 177 ILFVSES---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +V  S      G +   L + D DG N   +    D  +  P +S + + + Y++Y  
Sbjct: 158 LAYVKVSNPYARYGRLY-ELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYSG 216

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
              + VY ++    +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L +
Sbjct: 217 GS-MGVYTLEIATGKV-TRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLAT 274

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYF 350
            A +R+T    IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    +
Sbjct: 275 KALKRIT-INGINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAY 333

Query: 351 DPVWSPQGDLIAF----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           +P ++P G  I F    ++ SG + A      +GS   +    ++  +PT SP G  + +
Sbjct: 334 EPNYTPDGKNIVFMNQSSRTSGTQIA-DFNLANGSVTNITNGKAD-SSPTVSPYGDMVAY 391

Query: 407 SRKKDGDTGSKLYS----IDLNGRN----ETLINTPAYASDPQW 442
                  T ++ YS    + L+G N    ET  N       P W
Sbjct: 392 I-----STNTRGYSSLDMVSLDGDNHFNIETADNGNILIQSPSW 430


>gi|254369035|ref|ZP_04985048.1| protein tolB precursor [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121956|gb|EDO66126.1| protein tolB precursor [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 439

 Score =  104 bits (260), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 154/325 (47%), Gaps = 19/325 (5%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ V+  DL  +    L + D+ K +I    +IP    W SL +  +V  +  
Sbjct: 48  VDQFPQQVNSVIVADLNHNA--KLQANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYT 101

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSR 176
               +   VE ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F ++
Sbjct: 102 NNSYNNYTVEVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTK 161

Query: 177 ILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + +V  S +         L + D DG N   +    D  +  P +S + + + Y++Y   
Sbjct: 162 LAYVKVSNLYARYGRLYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYSGG 221

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSN 292
             + VY ++    +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L + 
Sbjct: 222 S-MGVYTLEIATGKV-TRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLATK 279

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFD 351
           A +R+T    IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    ++
Sbjct: 280 ALKRIT-INGINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYE 338

Query: 352 PVWSPQGDLIAF----TKFSGEKFA 372
           P ++P G  I F    ++ SG + A
Sbjct: 339 PNYTPDGKNIVFMNQSSRTSGTQIA 363


>gi|281357813|ref|ZP_06244299.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Victivallis vadensis ATCC BAA-548]
 gi|281315760|gb|EFA99787.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Victivallis vadensis ATCC BAA-548]
          Length = 404

 Score =  103 bits (258), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 150/331 (45%), Gaps = 22/331 (6%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE---KGDFNSRI 177
           +D  R+ F   D+      +G     +  S R IA  + + I +    +   KG   SRI
Sbjct: 81  RDGDRIRF---DLTQGGAPVGSWQAGAAGSDRAIAKNVVNAIIEKTFKDLKVKGFCASRI 137

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            F +++     ++N + V D DG N+  +T   + +  EP + P+ + + Y+ Y    I 
Sbjct: 138 AFCAQTAPG--VRN-IYVCDIDGGNVEQIT-RFNTLCVEPCWFPDGRSIGYSKYGRTGID 193

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V    T   R  + +  FR +      S +G++  + +  D  +D+Y + + S    RL
Sbjct: 194 VV--QTTLNPRRSRVLSAFRGINAGAAISPDGRQLAVILSPDHQVDLYVMPVGSTRLTRL 251

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKR---ISQDKEASYFDPV 353
           T  + +  S  +SPD SQ+ + SD  G  ++Y V   +GS +KR   I   ++A    P 
Sbjct: 252 TRNIAVEASPCWSPDGSQLAYVSDETGSPRIYTVTVHDGSGRKRLPVIPGGRDA--VTPD 309

Query: 354 WSPQGDLIAFTKFSGEKFAIGVM-KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           WS  G ++  TK +G  + I V   K G  +R      N ++P W+   R ++  R  DG
Sbjct: 310 WSKDGKIVYATKVNGN-YTIAVYDTKTGENKRATEAPGNWESPAWAADNRQVVCKR-ADG 367

Query: 413 DTGSKLYSIDL-NGRNETLINTPAYASDPQW 442
              S LY +D   G+   L+ TP   S P W
Sbjct: 368 SGKSALYVVDTWTGKTRLLVATPYNLSMPVW 398


>gi|167009212|ref|ZP_02274143.1| TolB protein precursor [Francisella tularensis subsp. holarctica
           FSC200]
 gi|169656512|ref|YP_001427788.2| tol-pal system component, TolB protein [Francisella tularensis
           subsp. holarctica FTNF002-00]
 gi|290954015|ref|ZP_06558636.1| tol-pal system component, TolB protein [Francisella tularensis
           subsp. holarctica URFT1]
 gi|295312604|ref|ZP_06803357.1| tol-pal system component, TolB protein [Francisella tularensis
           subsp. holarctica URFT1]
 gi|164551580|gb|ABU60832.2| tol-pal system component, TolB protein [Francisella tularensis
           subsp. holarctica FTNF002-00]
          Length = 439

 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 154/325 (47%), Gaps = 19/325 (5%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ V+  DL  +    L + D+ K +I    +IP    W SL +  +V  +  
Sbjct: 48  VDQFPQQVNSVMVADLNHNA--KLQANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYT 101

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSR 176
               +   VE ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F ++
Sbjct: 102 NNSYNNYTVEVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTK 161

Query: 177 ILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + +V  S +         L + D DG N   +    D  +  P +S + + + Y++Y   
Sbjct: 162 LAYVKVSNLYARYGRLYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYSGG 221

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSN 292
             + VY ++    +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L + 
Sbjct: 222 S-MGVYTLEIATGKV-TRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLATK 279

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFD 351
           A +R+T    IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    ++
Sbjct: 280 ALKRIT-INGINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYE 338

Query: 352 PVWSPQGDLIAF----TKFSGEKFA 372
           P ++P G  I F    ++ SG + A
Sbjct: 339 PNYTPDGKNIVFMNQSSRTSGTQIA 363


>gi|89255760|ref|YP_513122.1| TolB protein precursor [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314254|ref|YP_762977.1| TolB protein [Francisella tularensis subsp. holarctica OSU18]
 gi|254367130|ref|ZP_04983163.1| tolB protein precursor [Francisella tularensis subsp. holarctica
           257]
 gi|119371043|sp|Q2A580|TOLB_FRATH RecName: Full=Protein tolB; Flags: Precursor
 gi|122325710|sp|Q0BNJ4|TOLB_FRATO RecName: Full=Protein tolB; Flags: Precursor
 gi|89143591|emb|CAJ78774.1| TolB protein precursor [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129153|gb|ABI82340.1| TolB protein [Francisella tularensis subsp. holarctica OSU18]
 gi|134252953|gb|EBA52047.1| tolB protein precursor [Francisella tularensis subsp. holarctica
           257]
          Length = 435

 Score =  103 bits (258), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 154/325 (47%), Gaps = 19/325 (5%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ V+  DL  +    L + D+ K +I    +IP    W SL +  +V  +  
Sbjct: 44  VDQFPQQVNSVMVADLNHNA--KLQANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYT 97

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSR 176
               +   VE ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F ++
Sbjct: 98  NNSYNNYTVEVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTK 157

Query: 177 ILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + +V  S +         L + D DG N   +    D  +  P +S + + + Y++Y   
Sbjct: 158 LAYVKVSNLYARYGRLYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYSGG 217

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSN 292
             + VY ++    +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L + 
Sbjct: 218 S-MGVYTLEIATGKV-TRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLATK 275

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFD 351
           A +R+T    IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    ++
Sbjct: 276 ALKRIT-INGINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYE 334

Query: 352 PVWSPQGDLIAF----TKFSGEKFA 372
           P ++P G  I F    ++ SG + A
Sbjct: 335 PNYTPDGKNIVFMNQSSRTSGTQIA 359


>gi|223938135|ref|ZP_03630032.1| WD40 domain protein beta Propeller [bacterium Ellin514]
 gi|223893179|gb|EEF59643.1| WD40 domain protein beta Propeller [bacterium Ellin514]
          Length = 392

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 135/277 (48%), Gaps = 12/277 (4%)

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           K ++  K +S  AS R  AH ++DD+   +T   G  ++RI F  ++      ++ + V 
Sbjct: 95  KTVLFSKAYSG-ASTRSQAHRLADDVVLKLTSVNGIASTRIAFKVDTGA----QSEIYVS 149

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D DG N + +T S + I+  P + P +  + Y TY        Y      +R  + +  +
Sbjct: 150 DFDGHNPQAVT-SDNTIVASPCWFPGRLALCYLTYKLGPAKVFYQNLATGER--RNVAQY 206

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               ++P  S +GK A++ + K  + D+Y  +L  +  ++LT+T     S  +SPD   I
Sbjct: 207 PGDGISPAVSKDGKVAMV-LSKSGSPDLYVCNLDGSGMKQLTHTREDESSPCFSPDGQWI 265

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            F S    +  L  +  +G   KRI     ++  +P WSP G  I FT  +   F I V+
Sbjct: 266 CFASKGGERRALSKVSVDGGSVKRIPTAGVSNPSEPDWSPDGKYIVFTSQNSRGFNICVV 325

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             +G    +L E  +   P+W+P+ R+++F+R+K G+
Sbjct: 326 PAEGGTAIVLTEGED---PSWAPNSRTVVFARRKGGN 359


>gi|56707949|ref|YP_169845.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670420|ref|YP_666977.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254370438|ref|ZP_04986443.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874753|ref|ZP_05247463.1| tolB protein [Francisella tularensis subsp. tularensis MA00-2987]
 gi|67461899|sp|Q5NGJ7|TOLB_FRATT RecName: Full=Protein tolB; Flags: Precursor
 gi|118574581|sp|Q14HZ9|TOLB_FRAT1 RecName: Full=Protein tolB; Flags: Precursor
 gi|56604441|emb|CAG45473.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320753|emb|CAL08856.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568681|gb|EDN34335.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254840752|gb|EET19188.1| tolB protein [Francisella tularensis subsp. tularensis MA00-2987]
          Length = 439

 Score =  103 bits (257), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 184/404 (45%), Gaps = 36/404 (8%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ V+  DL  +    L + D+ K +I    +IP    W SL +  +V  +  
Sbjct: 48  VDQFPQQVNSVIVADLNHNA--KLQANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYT 101

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSR 176
               +   VE ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F ++
Sbjct: 102 NNSYNNYTVEVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTK 161

Query: 177 ILFVSES---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +V  S      G +   L + D DG N   +    D  +  P +S + + + Y++Y  
Sbjct: 162 LAYVKVSNPYARYGRLY-ELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYSG 220

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
              + VY ++    +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L +
Sbjct: 221 GS-MGVYTLEIATGKV-TRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLST 278

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYF 350
            A +R+T    IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    +
Sbjct: 279 KALKRIT-INGINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAY 337

Query: 351 DPVWSPQGDLIAF----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           +P ++P G  I F    ++ SG + A      +GS   +    ++  +PT SP G  + +
Sbjct: 338 EPNYTPDGKNIVFMNQSSRTSGTQIA-DFNLANGSVTNITNGKAD-SSPTVSPYGDMVAY 395

Query: 407 SRKKDGDTGSKLYS----IDLNGRN----ETLINTPAYASDPQW 442
                  T ++ YS    + L+G N    ET  N       P W
Sbjct: 396 I-----STNTRGYSSLDMVSLDGDNHFNIETADNGNILIQSPSW 434


>gi|224457030|ref|ZP_03665503.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159134|gb|ADA78525.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 435

 Score =  103 bits (257), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 184/404 (45%), Gaps = 36/404 (8%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ V+  DL  +    L + D+ K +I    +IP    W SL +  +V  +  
Sbjct: 44  VDQFPQQVNSVIVADLNHNA--KLQANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYT 97

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSR 176
               +   VE ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F ++
Sbjct: 98  NNSYNNYTVEVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTK 157

Query: 177 ILFVSES---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +V  S      G +   L + D DG N   +    D  +  P +S + + + Y++Y  
Sbjct: 158 LAYVKVSNPYARYGRLY-ELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYSG 216

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
              + VY ++    +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L +
Sbjct: 217 GS-MGVYTLEIATGKV-TRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLST 274

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYF 350
            A +R+T    IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    +
Sbjct: 275 KALKRIT-INGINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAY 333

Query: 351 DPVWSPQGDLIAF----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           +P ++P G  I F    ++ SG + A      +GS   +    ++  +PT SP G  + +
Sbjct: 334 EPNYTPDGKNIVFMNQSSRTSGTQIA-DFNLANGSVTNITNGKAD-SSPTVSPYGDMVAY 391

Query: 407 SRKKDGDTGSKLYS----IDLNGRN----ETLINTPAYASDPQW 442
                  T ++ YS    + L+G N    ET  N       P W
Sbjct: 392 I-----STNTRGYSSLDMVSLDGDNHFNIETADNGNILIQSPSW 430


>gi|57340054|gb|AAW50014.1| hypothetical protein FTT0840 [synthetic construct]
          Length = 474

 Score =  103 bits (256), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 184/404 (45%), Gaps = 36/404 (8%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ V+  DL  +    L + D+ K +I    +IP    W SL +  +V  +  
Sbjct: 74  VDQFPQQVNSVIVADLNHNA--KLQANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYT 127

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSR 176
               +   VE ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F ++
Sbjct: 128 NNSYNNYTVEVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTK 187

Query: 177 ILFVSES---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +V  S      G +   L + D DG N   +    D  +  P +S + + + Y++Y  
Sbjct: 188 LAYVKVSNPYARYGRLY-ELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYSG 246

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
              + VY ++    +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L +
Sbjct: 247 GS-MGVYTLEIATGKV-TRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLST 304

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYF 350
            A +R+T    IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    +
Sbjct: 305 KALKRIT-INGINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAY 363

Query: 351 DPVWSPQGDLIAF----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           +P ++P G  I F    ++ SG + A      +GS   +    ++  +PT SP G  + +
Sbjct: 364 EPNYTPDGKNIVFMNQSSRTSGTQIA-DFNLANGSVTNITNGKAD-SSPTVSPYGDMVAY 421

Query: 407 SRKKDGDTGSKLYS----IDLNGRN----ETLINTPAYASDPQW 442
                  T ++ YS    + L+G N    ET  N       P W
Sbjct: 422 I-----STNTRGYSSLDMVSLDGDNHFNIETADNGNILIQSPSW 460


>gi|187931255|ref|YP_001891239.1| group A colicin translocation; tolB protein [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|226705884|sp|B2SET5|TOLB_FRATM RecName: Full=Protein tolB; Flags: Precursor
 gi|187712164|gb|ACD30461.1| group A colicin translocation; tolB protein [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 435

 Score =  102 bits (254), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 184/404 (45%), Gaps = 36/404 (8%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ V+  DL  +    L + D+ K +I    +IP    W SL +  +V  +  
Sbjct: 44  VDQFPQQVNFVIVADLNHNA--KLQANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYT 97

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSR 176
               +   VE ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F ++
Sbjct: 98  NNSYNNYTVEVQILKRNDTSYLQAITYKNINVSLMRALAHKISNYVYQKLTGNQGFFLTK 157

Query: 177 ILFVSES---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +V  S      G +   L + D DG N   +    D  +  P +S + + + Y++Y  
Sbjct: 158 LAYVKVSNPYARYGRLY-ELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYSG 216

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
              + VY ++    +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L +
Sbjct: 217 GS-MGVYTLEIATGKV-TRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLST 274

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYF 350
            A +R+T    IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    +
Sbjct: 275 KALKRIT-INGINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAY 333

Query: 351 DPVWSPQGDLIAF----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           +P ++P G  I F    ++ SG + A      +GS   +    ++  +PT SP G  + +
Sbjct: 334 EPNYTPDGKNIVFMNQSSRTSGTQIA-DFNLANGSVTNITNGKAD-SSPTVSPYGDMVAY 391

Query: 407 SRKKDGDTGSKLYS----IDLNGRN----ETLINTPAYASDPQW 442
                  T ++ YS    + L+G N    ET  N       P W
Sbjct: 392 I-----STNTRGYSSLDMVSLDGDNHFNIETADNGNILIQSPSW 430


>gi|134302258|ref|YP_001122227.1| beta propeller repeat-containing outer membrane protein
           [Francisella tularensis subsp. tularensis WY96-3418]
 gi|166229978|sp|A4IYV5|TOLB_FRATW RecName: Full=Protein tolB; Flags: Precursor
 gi|134050035|gb|ABO47106.1| outer membrane protein/ tol-pal system beta propeller repeat
           protein [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 435

 Score =  101 bits (251), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 183/404 (45%), Gaps = 36/404 (8%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D+   +V+ V+  DL  +    L + D+ K +I    +IP    W SL +  +V  +  
Sbjct: 44  VDQFPQQVNSVIVADLNHNA--KLQANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYT 97

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSR 176
               +   VE ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F ++
Sbjct: 98  NNSYNNYTVEVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTK 157

Query: 177 ILFVSES---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +V  S      G +   L + D DG N   +    D  +  P +S + + + Y++Y  
Sbjct: 158 LAYVKVSNPYARYGRLY-ELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYSG 216

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
              + VY ++    +   RI N++ +  +P  S +GK   +++ K   +  +IY ++L +
Sbjct: 217 GS-MGVYTLEIATGKV-TRITNYKGINSSPSLSPDGKEIALALSKGYSDQTNIYIMNLST 274

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYF 350
            A +R+T    IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    +
Sbjct: 275 KALKRIT-INGINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAY 333

Query: 351 DPVWSPQGDLIAF----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           +P ++P G  I F    ++ SG + A      +GS   +    ++  +PT SP G  + +
Sbjct: 334 EPNYTPDGKNIVFMNQSSRTSGTQIA-DFNLANGSVTNITNGKAD-SSPTVSPYGDMVAY 391

Query: 407 SRKKDGDTGSKLYS----IDLNGRN----ETLINTPAYASDPQW 442
                  T ++ YS    + L+G N    ET  N       P W
Sbjct: 392 I-----STNTRGYSSLDMVSLDGDNHFNIETADNGNILIQSPSW 430


>gi|268326068|emb|CBH39656.1| conserved hypothetical secreted protein, containing WD40-like beta
           propeller repeats [uncultured archaeon]
 gi|268326194|emb|CBH39782.1| conserved hypothetical secreted protein, containing WD40-like beta
           propeller repeats [uncultured archaeon]
          Length = 303

 Score = 99.8 bits (247), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 136/276 (49%), Gaps = 22/276 (7%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI F S   + G   N + VMD DG N+  LT      +  P + P   K+A+ +  D D
Sbjct: 35  RIAFTSN--MDG--NNEIYVMDADGTNVTRLTNDIANDI-NPEWHPKGCKIAFTSDRDGD 89

Query: 236 ILRVYLMD---TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            L +YLMD   T I     ++ N         +S NG R   S  +D   +IY +D +  
Sbjct: 90  -LEIYLMDVDGTNI----TQLTNNTVADGCQCWSPNGSRIAFSSDRDGDPEIYVMDAEGT 144

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RLT+   ++I+  +SPD S+I F S R G  ++YVM  NG+++++++ + +  +  P
Sbjct: 145 NVTRLTDNTCLDINPHWSPDGSKIAFSSGRVGDTEIYVMDVNGANKEQLTDNNK--WDSP 202

Query: 353 -VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIF-SR 408
             W+   + + F+      F + +M  DG++   L  ++  Q  +P W+  G  ++F + 
Sbjct: 203 GEWASDSNKLLFSSDRDGDFEVYLMDADGTKVTQLTNNAEYQEGSPAWALGGEKIVFVAG 262

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWV 443
           +  GD   ++Y +D +G N T + T  A  SDP W 
Sbjct: 263 RYKGDF--EIYMMDSDGTNITQMTTNFADESDPVWA 296


>gi|225165753|ref|ZP_03727545.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Opitutaceae bacterium TAV2]
 gi|224800006|gb|EEG18443.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Opitutaceae bacterium TAV2]
          Length = 410

 Score = 99.8 bits (247), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 115/248 (46%), Gaps = 8/248 (3%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           ++ +G  G FN+R+ F+SE   SG  K  +   D     IR +T   + +   PR+SP+ 
Sbjct: 133 KATSGLNGYFNTRLAFISER--SG--KPEVYTSDLFAGEIRQIT-HDNALAVSPRWSPDG 187

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           Q + Y +Y       ++ MD    +    + +F+      R+S NG +  + +  +   +
Sbjct: 188 QGIIYTSYFRRGFPDIFKMDLNTLQRSTLV-SFKGTNTGARYSPNGAQIAMVLSGEGNPE 246

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +Y  D Q     RLT T  +  S  +SPD SQ+VF SD  G  QLYVM + G    R+  
Sbjct: 247 LYISDSQGRGVRRLTRTASVEASPCFSPDGSQLVFTSDAAGGPQLYVMSTAGGGASRLPT 306

Query: 344 DKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSG 401
           +      +P WS    + IAFT   G  F I V         ++ +  N    P+W   G
Sbjct: 307 NLSRYCAEPDWSRANPNKIAFTVRIGSGFQIAVYDMSTRSAAVVSKAPNDAVEPSWLADG 366

Query: 402 RSLIFSRK 409
           R LI++++
Sbjct: 367 RHLIYTQR 374



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 10/180 (5%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-REGKE 326
           N + A IS ++    ++Y+ DL +    ++T+   + +S  +SPD   I++ S  R G  
Sbjct: 143 NTRLAFIS-ERSGKPEVYTSDLFAGEIRQITHDNALAVSPRWSPDGQGIIYTSYFRRGFP 201

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERL 385
            ++ M  N + Q+      + +     +SP G  IA    SGE    + +    G   R 
Sbjct: 202 DIFKMDLN-TLQRSTLVSFKGTNTGARYSPNGAQIAMV-LSGEGNPELYISDSQGRGVRR 259

Query: 386 LVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI--NTPAYASDPQW 442
           L   ++++A P +SP G  L+F+   D   G +LY +   G   + +  N   Y ++P W
Sbjct: 260 LTRTASVEASPCFSPDGSQLVFT--SDAAGGPQLYVMSTAGGGASRLPTNLSRYCAEPDW 317


>gi|225872181|ref|YP_002753636.1| tolB protein, putative [Acidobacterium capsulatum ATCC 51196]
 gi|225793038|gb|ACO33128.1| tolB protein, putative [Acidobacterium capsulatum ATCC 51196]
          Length = 465

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/395 (25%), Positives = 181/395 (45%), Gaps = 36/395 (9%)

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL--GAQVLVTGRVIKEGKDRL 124
           +V+  DL+ + +F+++S+      +           W+     AQ++  G +   G  +L
Sbjct: 85  QVLYSDLENAGIFDMVSKSMAPPAMPGSPKELVLSQWSQPPSNAQMVAFGTLGVSGG-QL 143

Query: 125 RVEFRLWDVK--DRKQIIGKKFFS--SPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
            V+  L+D K  D  Q++GK++ +  + +  R IAH  +D+I   + G  G   ++I +V
Sbjct: 144 TVQGYLYDTKNADTPQVLGKQYSAQANESDARDIAHRFADEIILRLGGIPGIAQTKIYYV 203

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRV 239
              V  G+ K  + VMD DGAN + +T      +  P  SP+  K+A+ T+    + +R+
Sbjct: 204 ---VGRGMHKE-IWVMDYDGANKQQVTHLGSDSM-APAVSPDNSKLAFETFGKYGMQIRI 258

Query: 240 YLMDTRIDRAPKRIGNFRS---MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           Y +         R  +F S     ++P +S +G     S       DIY  D       R
Sbjct: 259 YSLLLH------RYLHFVSPGGTTISPSWSPDGIHLAYSSSGAGNPDIYVSDANGMNRHR 312

Query: 297 LTNTLFINISASYSPDS-SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +T     N    ++P + +QI +ES      Q+Y M ++GS+  R++    A    P WS
Sbjct: 313 ITAFRGPNAQPVWNPKTGAQIAWESGMTSLPQIYTMDADGSNVSRLTDGGYA--VSPSWS 370

Query: 356 PQGDLIAFT--KFSGEKFAIG--VMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFS 407
           P G  +AF   +  G     G  +   D +  R  V+ ++ Q     P+W+P GR ++F 
Sbjct: 371 PNGQFLAFAWDRHYGPGAPGGEDIYIMDITTHR-WVQLTHGQGVNDFPSWAPDGRHIVFQ 429

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           R + G T   ++S+  NG+ +  +     ++ P W
Sbjct: 430 RTEGGRT--DIWSMLANGQQQEQLTHNGSSTMPDW 462



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 42/162 (25%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  MD DG+N+  LT     +   P +SPN Q +A+A +D     R Y         P  
Sbjct: 345 IYTMDADGSNVSRLTDGGYAV--SPSWSPNGQFLAFA-WD-----RHY--------GPGA 388

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            G                            DIY +D+ ++   +LT+   +N   S++PD
Sbjct: 389 PG--------------------------GEDIYIMDITTHRWVQLTHGQGVNDFPSWAPD 422

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
              IVF+    G+  ++ M +NG  Q++++ +  ++  D  W
Sbjct: 423 GRHIVFQRTEGGRTDIWSMLANGQQQEQLTHNGSSTMPDWSW 464


>gi|254443124|ref|ZP_05056600.1| hypothetical protein VDG1235_1358 [Verrucomicrobiae bacterium
           DG1235]
 gi|198257432|gb|EDY81740.1| hypothetical protein VDG1235_1358 [Verrucomicrobiae bacterium
           DG1235]
          Length = 355

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 129/279 (46%), Gaps = 17/279 (6%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI-LFEPRFSPNQQKVAY 228
           +G F+ ++ F+SE   +      +CV D    N+  LT   D +    P +SP+   + Y
Sbjct: 88  EGFFSGKLTFISEETGA----TEVCVSDLLFQNVTILT--NDGVNAVRPHWSPDGNYIVY 141

Query: 229 ATYDD--EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +Y     DI R+ L   R D     + +++ + +  R+S +G R  + V  +   D++ 
Sbjct: 142 TSYKAGFPDIYRLDLRAQRRDV----VADYKGLNMGARYSPDGSRIAMIVSGNSNADVW- 196

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V   S     LT +  +  + ++SPD +++VF SD  G  QLYVM ++G   +R+  D  
Sbjct: 197 VREASGEMRNLTRSRGLEAAPAWSPDGTRLVFSSDERGGPQLYVMPAHGGTSRRLRTDIS 256

Query: 347 ASYFDPVWSPQ-GDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSL 404
               +P W+PQ  +LIAFT   G    I +      + R +  E  +   P W   GR L
Sbjct: 257 GYCAEPDWNPQFENLIAFTAAEGSGSQIAIYDSKAGKSRFVTTESGDAIEPQWLNDGRHL 316

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           +++ ++   +  K+    L G +  +    A  S P +V
Sbjct: 317 VYTHRRANRSEIKIMDT-LTGASYVISGRRAKVSQPSFV 354


>gi|301167924|emb|CBW27509.1| putative periplasmic TolB protein [Bacteriovorax marinus SJ]
          Length = 440

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 153/321 (47%), Gaps = 18/321 (5%)

Query: 100 FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS 159
           +  + + G   ++ G   ++  + L+V   + DV + K +  + +  S  + R  AH  S
Sbjct: 88  YSSFKTQGVSYVIRG-FFRQSGNSLQVTLLVHDVANTKVVSEESYTYSGENPRGFAHRFS 146

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLCVMDRDGANIRYLTPSRDQILFEPR 218
           D  Y+ ITG    FNS+++FVS+   +       L +MD DG N + LT     ++  P 
Sbjct: 147 DTAYKKITGSDSIFNSKMIFVSDRHGNKQTPVKELYMMDFDGGNKKRLT-HHGGVVISPA 205

Query: 219 FSPNQQKVAYATYDDEDI------LRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNGKR 271
            S +  KV Y+   +E        LRVY ++T R      R G     +  P     G+ 
Sbjct: 206 ISHDGTKVLYSLIKNEKSKHRNINLRVYDLETGRNSLVSSRNGLNSGAVFMP----GGES 261

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L+++      +I+ ++L++ A +RLTN+   ++  S + + S + F S R GK  +Y M
Sbjct: 262 ILLTLSHVGNAEIFIMNLKTKALKRLTNSYSPDVDPSINENGSIMTFLSGRAGKPMIYTM 321

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-- 389
                  KRIS   + +   P ++P G  IAF+ +   +F I  +  DGS    L +D  
Sbjct: 322 DMATRAVKRISFVGKFNA-TPRFAPDGKTIAFSSWLDSRFDIFRIDSDGSNLARLTKDFG 380

Query: 390 SNLQAPTWSPSGRSLIFSRKK 410
           SN + PT+S  G+ + FS ++
Sbjct: 381 SN-EDPTYSNDGQFIAFSSQR 400



 Score = 43.5 bits (101), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 44/102 (43%), Gaps = 6/102 (5%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +Y MD    RA KRI         PRF+ +GK    S   D   DI+ +D   +   RLT
Sbjct: 318 IYTMDMAT-RAVKRISFVGKFNATPRFAPDGKTIAFSSWLDSRFDIFRIDSDGSNLARLT 376

Query: 299 NTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNG 335
                N   +YS D   I F S R        + +Y+M ++G
Sbjct: 377 KDFGSNEDPTYSNDGQFIAFSSQRVLSRTRAVQNIYIMDNDG 418


>gi|148653367|ref|YP_001280460.1| WD40 domain-containing protein [Psychrobacter sp. PRwf-1]
 gi|148572451|gb|ABQ94510.1| WD40 domain protein beta Propeller [Psychrobacter sp. PRwf-1]
          Length = 449

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 172/381 (45%), Gaps = 17/381 (4%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           VS ++  +LQ +    + SQ    Q  +  D       W  LG   LV G   ++G +  
Sbjct: 80  VSSLIENNLQATP-LKITSQGLIGQPHSRDDLAVTLPAWQQLGIPYLVIGSSKQQGGNT- 137

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            + F + +V   + I G +        +  A+  +  IY+ +TG++ D N+R+++V E  
Sbjct: 138 SITFEVIEVAQGRIIKGTQMVQG-VDKKAAANKAAGRIYELLTGKQIDLNARLVYVEEKG 196

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                 +SL + D DG+N R L    D  ++ P  SP+ + VAY+    ++   ++  D 
Sbjct: 197 SGKSKTSSLILSDADGSNKRLLAQVIDAAIYSPAISPDGRFVAYSVQLKDNSANLWKQDL 256

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +  R   R+ + +   L+P FS +G + L S   +   DIY V  Q    E++ +  +  
Sbjct: 257 QT-RQLTRLVDMKGSNLSPSFSPDGSKILFSSTVNGDSDIYRVSSQGGKAEQIISLPYDQ 315

Query: 305 ISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +S SY+ + S  VF SD     +  +Y    +GS   +IS+   A+  +P  SP+G  I 
Sbjct: 316 LSPSYASNGS-FVFVSDHASPNRPNIYRYSFSGSP-VQISRGGYAA--NPSISPEGTKIG 371

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   SG   AI  M  +GS            AP +SP+G  +++S+   G   S L    
Sbjct: 372 Y--LSGRSAAI--MSSNGSNVANYGATGIDAAPKFSPTGERVVYSQ---GTKNSNLVIRY 424

Query: 423 LNGRNETLINTPAYASDPQWV 443
           ++G     + T   A  P WV
Sbjct: 425 VDGGKTITLPTEGVAKFPVWV 445


>gi|159897506|ref|YP_001543753.1| WD40 domain-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159890545|gb|ABX03625.1| WD40 domain protein beta Propeller [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 316

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 117/238 (49%), Gaps = 14/238 (5%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRA 272
           L  P      Q++A+       I R  +M + +D  P ++ N    + + P +S +G   
Sbjct: 39  LATPTVGEAPQRLAFVA---NQINRGTIMISGLDANPPQLLNPDFPLAIDPTWSPDGNEL 95

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
              VQ  +  ++Y      +   ++TN    + S S+SPD  Q+ F+S+R G ++LY++ 
Sbjct: 96  AFVVQDSDGFNMYISSADGSNLFQVTNQPGDDQSPSWSPDGQQLAFQSNRSGNDELYLIN 155

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG------VMKKDGSQERLL 386
            +GS+ ++++ D  A  + P WSP G LIAFT   G +   G      V++ DG   + L
Sbjct: 156 RDGSNLRQLTNDP-ARDWQPSWSPDGSLIAFTSDRGAQTPDGWNDQLYVIQPDGQGLKYL 214

Query: 387 VED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            E     + P WSP  + L++         + +Y+++ +G + TL+   A A DPQW+
Sbjct: 215 TEGFGRARHPAWSPDSQQLVYVVGGGDVGSNSIYTVNRDGSDPTLLY--ANAFDPQWL 270


>gi|303248655|ref|ZP_07334909.1| WD40 domain protein beta Propeller [Desulfovibrio fructosovorans
           JJ]
 gi|302489911|gb|EFL49837.1| WD40 domain protein beta Propeller [Desulfovibrio fructosovorans
           JJ]
          Length = 440

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 169/385 (43%), Gaps = 19/385 (4%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKI--TNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           K+ ++++KDLQ      L+   +   +I     D I  F+ ++     VLVT +    G 
Sbjct: 64  KLQDLINKDLQFLPFLQLVPPSNIPGQIGGATADQI-DFKPFSMGKIDVLVTSK-WTPGG 121

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
           +   VE R ++V  +K I+GK + S + A    IA     ++  ++TG+ G FNS+I FV
Sbjct: 122 NLGNVELRAFEVYSQKVIVGKGYDSVTDAQLPDIADRFCMELMAALTGQGGFFNSQIAFV 181

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDILRV 239
             S   G     +  +   G  +  +T   +  + E P +S + + +A+           
Sbjct: 182 KPSSGKG---TDIWTVRPTGRGLTRITHYNELGMAESPAWSFDGRSIAFTLIGSRS---H 235

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           YL        P+      + +++PRF  NG+ A +SV+     DIY ++        L  
Sbjct: 236 YLGVWSGGGKPQVYTLPSTNVVSPRFLPNGQIA-VSVRMHGKADIYLLNANHQPGRVLAG 294

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              IN+S S+    S + F +D+ G   +Y+   +G   +RI+     +  +P  SP G 
Sbjct: 295 GPGINVSPSFDASGSLMAFVNDQAGNPNIYLQNVSGGSPRRITPSGYNT--NPSLSPDGK 352

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKL 418
           LIA+TK  G    + V      Q+  +       + P++SP G  ++FS  + G    KL
Sbjct: 353 LIAYTKQLGGAQKVFVHDMTTGQDTQVTSGGGSDENPSFSPDGYFIVFSSTRSGQ--KKL 410

Query: 419 YSIDLNGRNETLINTP-AYASDPQW 442
           Y    +G    +I T    A  P W
Sbjct: 411 YVTTRHGTPPIMIPTGDGTAQMPCW 435



 Score = 43.9 bits (102), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 1/94 (1%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +GK    + Q   A  ++  D+ +    ++T+    + + S+SPD   IVF S R
Sbjct: 345 PSLSPDGKLIAYTKQLGGAQKVFVHDMTTGQDTQVTSGGGSDENPSFSPDGYFIVFSSTR 404

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            G+++LYV   +G+    I      +   P W P
Sbjct: 405 SGQKKLYVTTRHGTPPIMIPTGDGTAQM-PCWGP 437


>gi|145628741|ref|ZP_01784541.1| translocation protein TolB precursor [Haemophilus influenzae
           22.1-21]
 gi|144979211|gb|EDJ88897.1| translocation protein TolB precursor [Haemophilus influenzae
           22.1-21]
          Length = 317

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 129/257 (50%), Gaps = 11/257 (4%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q+ T+   +   + W+++G   +V G+V+  G +  
Sbjct: 62  ISKIVADDLRNSGKFNPIAVSQMPQRPTSAAEV-NPEAWSNIGIDAIVIGQVVPSG-NGY 119

Query: 125 RVEFRLWDVKDRKQIIG----KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G    +  ++    W R  AHT+SD++++ +T  +G F +RI +
Sbjct: 120 SITYQLIDTVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAY 179

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++   ++
Sbjct: 180 VVQKN-GGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKK-SQL 236

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D     A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+
Sbjct: 237 VVQDLN-SGARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTS 295

Query: 300 TLFINISASYSPDSSQI 316
               N   ++SPD + I
Sbjct: 296 GAGNNTEPAWSPDGNSI 312



 Score = 43.1 bits (100), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 8/155 (5%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY---VMQSNGSDQKRISQDKEASY 349
               +++ +F  ++A      ++I +   + G  Q Y   V   +G +Q  +++  +   
Sbjct: 154 GAHTVSDEVFEKLTAIRGAFRTRIAYVVQKNGGSQPYEVRVADYDGYNQFIVNRSAQ-PI 212

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR 408
             P WSP G  +A+  F  +K  + V   +    +++     +  AP +SP G  L F+ 
Sbjct: 213 MSPAWSPDGQRLAYVSFENKKSQLVVQDLNSGARKVVASFQGHNGAPAFSPDGSRLAFAS 272

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQW 442
            +DG     +Y +  NG   T + + A   ++P W
Sbjct: 273 SRDGVL--NIYVMGANGGTPTQLTSGAGNNTEPAW 305



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 44/101 (43%), Gaps = 2/101 (1%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S ++SPD  ++ + S    K QL V   N S  +++    +     P +SP G  +AF 
Sbjct: 213 MSPAWSPDGQRLAYVSFENKKSQLVVQDLN-SGARKVVASFQGHNGAPAFSPDGSRLAFA 271

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSL 404
                   I VM  +G     L   + N   P WSP G S+
Sbjct: 272 SSRDGVLNIYVMGANGGTPTQLTSGAGNNTEPAWSPDGNSI 312


>gi|156744050|ref|YP_001434179.1| WD40 domain-containing protein [Roseiflexus castenholzii DSM 13941]
 gi|156235378|gb|ABU60161.1| WD40 domain protein beta Propeller [Roseiflexus castenholzii DSM
           13941]
          Length = 572

 Score = 89.7 bits (221), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 88/183 (48%), Gaps = 6/183 (3%)

Query: 263 PRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           P     G+    + + D  A DI+S DL       LT   + + S S+SPD++ +VF S 
Sbjct: 29  PALPGQGRILFAAARGDNGAFDIFSADLAGERAANLTADPYPDRSPSWSPDANHVVFASR 88

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R     LYVM+++GSD +R++ +  A   +P WSP G  +AFT        I  +   G 
Sbjct: 89  RGDNWDLYVMRADGSDLRRLT-NHPAYDGEPSWSPDGRRVAFTSMRDGNPEIYTLDLIGG 147

Query: 382 QERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASD 439
             R +       A PTWSP GR + F+  +DG+   ++Y  D  +G    L N PA    
Sbjct: 148 DARRITTHPAADAQPTWSPDGRRIAFTSWRDGN--QEIYIADAESGAVINLTNHPAPDHS 205

Query: 440 PQW 442
           P W
Sbjct: 206 PAW 208



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 10/183 (5%)

Query: 193 LCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           L VM  DG+++R LT  P+ D    EP +SP+ ++VA+ +  D +   +Y +D  I    
Sbjct: 95  LYVMRADGSDLRRLTNHPAYDG---EPSWSPDGRRVAFTSMRDGNP-EIYTLDL-IGGDA 149

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +RI    +    P +S +G+R   +  +D   +IY  D +S A   LTN    + S ++S
Sbjct: 150 RRITTHPAADAQPTWSPDGRRIAFTSWRDGNQEIYIADAESGAVINLTNHPAPDHSPAWS 209

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--G 368
           PD  +I F SDR+G   L++      ++ R   D      DP W+P G L+A   ++  G
Sbjct: 210 PDGGRIAFISDRDGGGNLHIRDLITGEELRAGPDN-LGLRDPAWTPGGGLMAVAPWALGG 268

Query: 369 EKF 371
            +F
Sbjct: 269 RRF 271



 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 4/163 (2%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +P +S +    + + ++ +  D+Y +    +   RLTN    +   S+SPD  ++ F S 
Sbjct: 73  SPSWSPDANHVVFASRRGDNWDLYVMRADGSDLRRLTNHPAYDGEPSWSPDGRRVAFTSM 132

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-G 380
           R+G  ++Y +   G D +RI+    A    P WSP G  IAFT +      I +   + G
Sbjct: 133 RDGNPEIYTLDLIGGDARRITTHPAADA-QPTWSPDGRRIAFTSWRDGNQEIYIADAESG 191

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +   L    +   +P WSP G  + F   +DG  G  L+  DL
Sbjct: 192 AVINLTNHPAPDHSPAWSPDGGRIAFISDRDG--GGNLHIRDL 232


>gi|149199226|ref|ZP_01876264.1| WD40-like Beta Propeller [Lentisphaera araneosa HTCC2155]
 gi|149137651|gb|EDM26066.1| WD40-like Beta Propeller [Lentisphaera araneosa HTCC2155]
          Length = 407

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 132/280 (47%), Gaps = 23/280 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S+I F +   V+G  +  LC  D DG N+R  T  +  I   PR+SP+ + + Y  Y   
Sbjct: 134 SQIAFCAR--VNGKKEIYLC--DLDGNNLRKKTNFKS-ITALPRWSPDNRYLVYTVYGKA 188

Query: 235 DILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-N 292
                 +  T ++    RI  ++R M     F   G   ++++ K  ++D+Y +DL +  
Sbjct: 189 S---TNIFQTDLNSNKHRILSHYRGMNTGAAFRPKGNAIVMTLSKGNSVDLYWMDLNNIG 245

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKE------QLYVMQSNGSDQKRISQDKE 346
            T RLT T  +  S  +SP  +QI + S            +LYVM ++    K +  D+ 
Sbjct: 246 KTGRLTKTTSLESSPVFSPSGAQICYVSSSVSSSGKVSTPRLYVMNASKLTTKPLFNDR- 304

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLLVEDS-NLQAPTWSPSGRS 403
           +    P WS   +L+ ++K  G ++ I     K     E+++ + + + +AP+WSP GR 
Sbjct: 305 SERVSPDWSKTSNLLVYSKKMGRQYVIATCDPKNPSGTEKIISKTAGHWEAPSWSPDGRH 364

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQW 442
           ++ +R   G+   +LY +D   +    INT   + S P W
Sbjct: 365 IVCTRDTGGE--KQLYIVDTLYKTSRKINTTLKHCSSPSW 402



 Score = 39.7 bits (91), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 59/131 (45%), Gaps = 6/131 (4%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +SQI F +   GK+++Y+   +G++ ++ +  K  +   P WSP    + +T +      
Sbjct: 133 TSQIAFCARVNGKKEIYLCDLDGNNLRKKTNFKSITAL-PRWSPDNRYLVYTVYGKASTN 191

Query: 373 IGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN--GRNET 429
           I     + ++ R+L     +     + P G +++ +  K       LY +DLN  G+   
Sbjct: 192 IFQTDLNSNKHRILSHYRGMNTGAAFRPKGNAIVMTLSKGNSVD--LYWMDLNNIGKTGR 249

Query: 430 LINTPAYASDP 440
           L  T +  S P
Sbjct: 250 LTKTTSLESSP 260


>gi|319760470|ref|YP_004124408.1| protein TolB [Candidatus Blochmannia vafer str. BVAF]
 gi|318039184|gb|ADV33734.1| protein TolB [Candidatus Blochmannia vafer str. BVAF]
          Length = 460

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 19/268 (7%)

Query: 70  SKDLQRSDVFNLISQDSFKQKITN-PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           + DL+ S  FN +       + +   D +P F  W  LG   +V G +  +  D   + +
Sbjct: 66  AADLRNSGKFNTLPISFLPHQPSKLSDIVPMF--WKKLGINTIVLGSINIDCNDNYLITY 123

Query: 129 RLWDVKDRKQII--GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D      +I    ++       R  AHTIS++I++ +TG KG F +RI +VS  + +
Sbjct: 124 QLIDTSSNPALIILENQYLIKKKYTRCAAHTISNEIFEKLTGIKGAFCTRIAYVSY-IHN 182

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDT- 244
                 L V D DG N   +  S +  L  P ++P+ +K+AY  +      L V  + T 
Sbjct: 183 TKYPYELYVADYDGYNQISICRSAEP-LMSPAWTPDGKKIAYVAFSSGHSELVVQTLGTG 241

Query: 245 ---RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
               I + P   G       AP FS +G++   S  K  ++++Y + L S    ++T+  
Sbjct: 242 LINHIIKFPNHNG-------APAFSPDGEKLAFSSSKTGSLNLYVMYLSSGKICQITSNR 294

Query: 302 FINISASYSPDSSQIVFESDREGKEQLY 329
             N   S+ PD++ + + SD+ G  Q+Y
Sbjct: 295 HNNTEPSWFPDNTNLAYTSDQGGIPQIY 322


>gi|301058341|ref|ZP_07199374.1| putative Tol-Pal system beta propeller repeat protein TolB [delta
           proteobacterium NaphS2]
 gi|300447577|gb|EFK11309.1| putative Tol-Pal system beta propeller repeat protein TolB [delta
           proteobacterium NaphS2]
          Length = 205

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 102/207 (49%), Gaps = 9/207 (4%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +YL D  +  A +R+     + +   ++ NGK   +++      DI+++DLQ     +L 
Sbjct: 2   LYLRDL-VTGALRRLSGRSGLNIGACWAPNGKELALTMSHKGNPDIFTIDLQGKILRQLV 60

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQ 357
               I++S ++SPD +++ F S+R G  Q+Y+++ +     R++   E SY   P WS  
Sbjct: 61  EHWGIDVSPAFSPDGTKLAFVSNRSGSPQIYLLEISSGRVDRLTY--EGSYNTSPAWSAL 118

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            + IAF   +   F I  M  DGS  +RL  +  N + P WSP GR + FS  + G    
Sbjct: 119 -NRIAFVGKTDGHFDIFTMAPDGSGMKRLTADSGNNEDPCWSPDGRYIAFSSDRTG--AY 175

Query: 417 KLYSIDLNGRNETLIN-TPAYASDPQW 442
            +Y ++ NGR +  I       + P W
Sbjct: 176 HIYMMNANGRTQRRITFEKGKQTSPSW 202


>gi|297171859|gb|ADI22848.1| periplasmic component of the Tol biopolymer transport system
           [uncultured nuHF2 cluster bacterium HF0500_31B05]
          Length = 848

 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 22/240 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---YDDEDILRVYLMDTRIDRA 249
           +  M  DG   R+     + +  EP +SP+  ++A+ +   +++E    +Y M+      
Sbjct: 57  IYAMSSDGEE-RFQLTRHEAMDGEPDWSPDGLRLAFVSNRAFNNE----IYTMNGD-GSG 110

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +R+    ++  +P ++ +G R      +DE ++IYSVD  S AT RLTN    ++  ++
Sbjct: 111 VQRMTEHEAVDGSPAWAPDGSRIAFVSDRDENLEIYSVDTASGATTRLTNHEADDLEPAW 170

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  Q++F S R G  ++Y   ++G +   +S   EA+   P WSP G  IA+T     
Sbjct: 171 SPDGRQLLFVSSRSGNAEIYAADADGGNPVNVST-HEATDGSPSWSPDGTTIAYTSDRDG 229

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ--------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              + +M     +    +E  NL          P+WSP    L F   + G+   ++YS+
Sbjct: 230 NSDLYLMSAHAPE----IEPVNLTYDSAFDGFTPSWSPDSEQLTFVSNRSGNNDFEIYSM 285



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 115/265 (43%), Gaps = 26/265 (9%)

Query: 197 DRDGANIRYLTPSRDQILFE----------PRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           DRDG +  YL      + FE          P +SPN+  + + T D +    +YL+ +  
Sbjct: 360 DRDGNDEIYLMSPDGMVPFELITDAANDFDPVWSPNESTIGFVT-DRDGNEEIYLVRSGA 418

Query: 247 DRAP----KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTN 299
           +       +   N R    +P    +G R +    +D   +IY +   D    +  RLTN
Sbjct: 419 EEEAINLTENAANDRDFAWSP----DGDRLVFVSDRDGNDEIYILTLADTTDTSLLRLTN 474

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               +   ++SPD+ +I F SDR+G   LY ++++ +  + I   ++ S  DPVWSP   
Sbjct: 475 NTQRDGDPTWSPDAKEIAFTSDRDGGVDLYTLRADAASSEAIRLTEDGSVDDPVWSPNAT 534

Query: 360 LIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            IAF +  +G++    +    G+   L        APTW P G  L F   +DG     L
Sbjct: 535 RIAFVSDRTGDREIYSIDADGGTAVNLSDHPGEDYAPTWFPDGSLLAFVSNRDGQ--PDL 592

Query: 419 YSIDLNGRNETLINTPAYASD-PQW 442
           Y ++ +G   T +       D P W
Sbjct: 593 YRMERDGDEVTRLTENEDEEDAPSW 617



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 9/190 (4%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSS 314
           +S  L P   S+  R   +  +D   DIY+  + S+  ER  LT    ++    +SPD  
Sbjct: 30  KSRDLIPDDYSSEDRIAFTSDRDGDFDIYA--MSSDGEERFQLTRHEAMDGEPDWSPDGL 87

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI- 373
           ++ F S+R    ++Y M  +GS  +R+++  EA    P W+P G  IAF     E   I 
Sbjct: 88  RLAFVSNRAFNNEIYTMNGDGSGVQRMTE-HEAVDGSPAWAPDGSRIAFVSDRDENLEIY 146

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            V    G+  RL   +++   P WSP GR L+F   + G+  +++Y+ D +G N   ++T
Sbjct: 147 SVDTASGATTRLTNHEADDLEPAWSPDGRQLLFVSSRSGN--AEIYAADADGGNPVNVST 204

Query: 434 -PAYASDPQW 442
             A    P W
Sbjct: 205 HEATDGSPSW 214



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/238 (26%), Positives = 107/238 (44%), Gaps = 20/238 (8%)

Query: 215 FEPRFSPNQQKVAYATY----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           F P +SP+ +++ + +     +D +I  +++        P+R          P +S NG 
Sbjct: 257 FTPSWSPDSEQLTFVSNRSGNNDFEIYSMFVQ-------PQRFLEELDQAGFPAWSRNGN 309

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R  +  Q     DI+  D      + LT         ++SPD+S I F SDR+G +++Y+
Sbjct: 310 RLAVVAQGAVNKDIFVSDADGIEIDNLTTDAANERFPAWSPDASAIAFTSDRDGNDEIYL 369

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVED 389
           M  +G     +  D  A+ FDPVWSP    I F         I +++    +E + L E+
Sbjct: 370 MSPDGMVPFELITDA-ANDFDPVWSPNESTIGFVTDRDGNEEIYLVRSGAEEEAINLTEN 428

Query: 390 -SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET----LINTPAYASDPQW 442
            +N +   WSP G  L+F   +DG+   ++Y + L    +T    L N      DP W
Sbjct: 429 AANDRDFAWSPDGDRLVFVSDRDGN--DEIYILTLADTTDTSLLRLTNNTQRDGDPTW 484



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 107/243 (44%), Gaps = 17/243 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L  +  D A+   +  + D  + +P +SPN  ++A+ + D      +Y +D     A   
Sbjct: 503 LYTLRADAASSEAIRLTEDGSVDDPVWSPNATRIAFVS-DRTGDREIYSIDADGGTA-VN 560

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + +      AP +  +G        +D   D+Y ++   +   RLT       + S+SP 
Sbjct: 561 LSDHPGEDYAPTWFPDGSLLAFVSNRDGQPDLYRMERDGDEVTRLTENEDEEDAPSWSPS 620

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             Q+V+ S   G   + ++ S G   +R++ D   +   P WS  GD IA+       + 
Sbjct: 621 GLQLVYASGSSGNLNIQLIGSQGLVPRRVT-DHPGADVCPTWSSSGDRIAYMSNRDGNYE 679

Query: 373 IGVMKKDGSQERLLVEDSNLQA--------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           I V K    Q+ L +  +NL +        P W+PS   L+F   +DG+  +++Y +D N
Sbjct: 680 IYVSK----QDSLELAPTNLTSAPAADDRYPAWAPSRGELLFVSNRDGN--NEIYLMDAN 733

Query: 425 GRN 427
           G N
Sbjct: 734 GSN 736



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/316 (22%), Positives = 131/316 (41%), Gaps = 60/316 (18%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+ FVS         N +  M+ DG+ ++ +T   + +   P ++P+  ++A+ +  DE+
Sbjct: 88  RLAFVSNRA----FNNEIYTMNGDGSGVQRMT-EHEAVDGSPAWAPDGSRIAFVSDRDEN 142

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD------- 288
            L +Y +DT    A  R+ N  +  L P +S +G++ L    +    +IY+ D       
Sbjct: 143 -LEIYSVDT-ASGATTRLTNHEADDLEPAWSPDGRQLLFVSSRSGNAEIYAADADGGNPV 200

Query: 289 -----------------------------------LQSNATE----RLT-NTLFINISAS 308
                                              + ++A E     LT ++ F   + S
Sbjct: 201 NVSTHEATDGSPSWSPDGTTIAYTSDRDGNSDLYLMSAHAPEIEPVNLTYDSAFDGFTPS 260

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPDS Q+ F S+R G     +       Q+ + +  +A +  P WS  G+ +A      
Sbjct: 261 WSPDSEQLTFVSNRSGNNDFEIYSMFVQPQRFLEELDQAGF--PAWSRNGNRLAVVAQGA 318

Query: 369 EKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               I V   DG + + L  + +N + P WSP   ++ F+  +DG+   ++Y +  +G  
Sbjct: 319 VNKDIFVSDADGIEIDNLTTDAANERFPAWSPDASAIAFTSDRDGN--DEIYLMSPDGMV 376

Query: 428 E-TLINTPAYASDPQW 442
              LI   A   DP W
Sbjct: 377 PFELITDAANDFDPVW 392



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 95/226 (42%), Gaps = 56/226 (24%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L  M+RDG  +  LT + D+    P +SP+  ++ YA+    + L + L+ ++    P+R
Sbjct: 592 LYRMERDGDEVTRLTENEDE-EDAPSWSPSGLQLVYASGSSGN-LNIQLIGSQ-GLVPRR 648

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---- 308
           + +     + P +SS+G R      +D   +IY   +    +  L  T   +  A+    
Sbjct: 649 VTDHPGADVCPTWSSSGDRIAYMSNRDGNYEIY---VSKQDSLELAPTNLTSAPAADDRY 705

Query: 309 --YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             ++P   +++F S+R+G  ++Y+M +NGS+  R++            +P  DL A    
Sbjct: 706 PAWAPSRGELLFVSNRDGNNEIYLMDANGSNLVRLTD-----------NPSEDLFA---- 750

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
                                        TWSP G  ++F+  + G
Sbjct: 751 -----------------------------TWSPDGSQVVFASDRGG 767


>gi|295841255|dbj|BAJ07029.1| WD40-like beta propeller protein [uncultured bacterium]
          Length = 328

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/247 (26%), Positives = 120/247 (48%), Gaps = 24/247 (9%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKRIG 254
           ++ DG  +  LT   ++ L +P +SP+ + +AY   D+E  + +YLM  + D + P R+ 
Sbjct: 69  VNADGTALTRLTHDEER-LSKPAWSPDGKSIAYVVTDEEFNVDIYLM--KADGSNPARLT 125

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAM--------------DIYSVDLQSNATERLTNT 300
             R +   P +   G   + S  +D  +              +IY +D   +    LT++
Sbjct: 126 TDRWVDTEPAWDPTGGSIVFSSDRDSYLNIEDGKTYEMVYEFEIYVMDANGSGQTNLTDS 185

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              + + ++SPD  QI F+S R+   ++Y+M ++GS Q  ++   E     P WSP G  
Sbjct: 186 PGWDTAPAWSPDGGQIAFQSSRDENPEIYMMDADGSRQVNLTNHPEDDAA-PAWSPDGSK 244

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            AF       F I VM+ DG+    L    D ++Q P W+P G+ + F   ++G+   ++
Sbjct: 245 TAFHSDRTGVFNIYVMETDGTGLVQLTSSPDWDIQ-PAWAPDGQHIAFYSGQEGNF--EI 301

Query: 419 YSIDLNG 425
           Y ++ +G
Sbjct: 302 YVMNADG 308



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 17/221 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA-------------TYDDEDILRV 239
           + +M  DG+N   LT  R  +  EP + P    + ++             TY+      +
Sbjct: 111 IYLMKADGSNPARLTTDR-WVDTEPAWDPTGGSIVFSSDRDSYLNIEDGKTYEMVYEFEI 169

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y+MD         + +      AP +S +G +      +DE  +IY +D   +    LTN
Sbjct: 170 YVMDAN-GSGQTNLTDSPGWDTAPAWSPDGGQIAFQSSRDENPEIYMMDADGSRQVNLTN 228

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               + + ++SPD S+  F SDR G   +YVM+++G+   +++   +     P W+P G 
Sbjct: 229 HPEDDAAPAWSPDGSKTAFHSDRTGVFNIYVMETDGTGLVQLTSSPDWD-IQPAWAPDGQ 287

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSP 399
            IAF       F I VM  DGS +  L    +    P W P
Sbjct: 288 HIAFYSGQEGNFEIYVMNADGSCQMRLTYHGDFDGFPDWRP 328



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 107/248 (43%), Gaps = 32/248 (12%)

Query: 223 QQKVAYATYDD--EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           Q ++A+A+Y D   +I  V    T +     R+ +    +  P +S +GK     V  +E
Sbjct: 51  QGRLAFASYRDGESEIYSVNADGTAL----TRLTHDEERLSKPAWSPDGKSIAYVVTDEE 106

Query: 281 -AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-------EGKE------ 326
             +DIY +    +   RLT   +++   ++ P    IVF SDR       +GK       
Sbjct: 107 FNVDIYLMKADGSNPARLTTDRWVDTEPAWDPTGGSIVFSSDRDSYLNIEDGKTYEMVYE 166

Query: 327 -QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QER 384
            ++YVM +NGS Q  ++ D       P WSP G  IAF     E   I +M  DGS Q  
Sbjct: 167 FEIYVMDANGSGQTNLT-DSPGWDTAPAWSPDGGQIAFQSSRDENPEIYMMDADGSRQVN 225

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYA 437
           L     +  AP WSP G    F   + G     +Y ++ +G     + +       PA+A
Sbjct: 226 LTNHPEDDAAPAWSPDGSKTAFHSDRTGVF--NIYVMETDGTGLVQLTSSPDWDIQPAWA 283

Query: 438 SDPQWVGF 445
            D Q + F
Sbjct: 284 PDGQHIAF 291


>gi|153877364|ref|ZP_02004199.1| translocation protein TolB precursor [Beggiatoa sp. PS]
 gi|152066172|gb|EDN65801.1| translocation protein TolB precursor [Beggiatoa sp. PS]
          Length = 216

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 11/187 (5%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP +S +GKR   ++ +D   +IY ++L S   +RLTN   I+    ++ D   IVF SD
Sbjct: 38  APAWSPDGKRLAFTLSQDGNPEIYVMNLYSRGLKRLTNHQAIDTEPEWASDGRTIVFTSD 97

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           R G+ Q+Y +  NG   +R++     SY   P  SP G  +A    SG  + I V+    
Sbjct: 98  RSGQPQIYRISVNGGKAQRLT--FHGSYNARPRLSPDGSQLAVLHSSGRGYKIAVITLKT 155

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG--RNETLINTPAYAS 438
            Q ++L + +  ++P+++P+G  +I++      TGS+L ++ ++G  R    ++  A   
Sbjct: 156 GQMKVLSQTTLDESPSFAPNGSMIIYA------TGSELAAVSVDGRVRQRLSVDMNAQVR 209

Query: 439 DPQWVGF 445
           +P W  F
Sbjct: 210 EPAWSPF 216



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 12/186 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +SP+ +++A+    D +   +Y+M+    R  KR+ N +++   P ++S+G+  + + 
Sbjct: 39  PAWSPDGKRLAFTLSQDGNP-EIYVMNL-YSRGLKRLTNHQAIDTEPEWASDGRTIVFTS 96

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSNG 335
            +     IY + +     +RLT     N     SPD SQ+ V  S   G +   +    G
Sbjct: 97  DRSGQPQIYRISVNGGKAQRLTFHGSYNARPRLSPDGSQLAVLHSSGRGYKIAVITLKTG 156

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA- 394
              K +SQ        P ++P G +I +   S E  A+ V   DG   + L  D N Q  
Sbjct: 157 -QMKVLSQTTLDE--SPSFAPNGSMIIYATGS-ELAAVSV---DGRVRQRLSVDMNAQVR 209

Query: 395 -PTWSP 399
            P WSP
Sbjct: 210 EPAWSP 215



 Score = 40.0 bits (92), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 25/117 (21%)

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           ++  K  +  +Q  G+ ++     K      P WSP G  +AFT           + +DG
Sbjct: 8   EKGAKRMVVYIQEIGTGRRTRVSAKPGLNAAPAWSPDGKRLAFT-----------LSQDG 56

Query: 381 SQE--------RLLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           + E        R L   +N QA    P W+  GR+++F+  + G    ++Y I +NG
Sbjct: 57  NPEIYVMNLYSRGLKRLTNHQAIDTEPEWASDGRTIVFTSDRSGQ--PQIYRISVNG 111



 Score = 37.4 bits (85), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 3/65 (4%)

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYAS 438
           G + R+  +     AP WSP G+ L F+  +DG+   ++Y ++L  R  + L N  A  +
Sbjct: 24  GRRTRVSAKPGLNAAPAWSPDGKRLAFTLSQDGN--PEIYVMNLYSRGLKRLTNHQAIDT 81

Query: 439 DPQWV 443
           +P+W 
Sbjct: 82  EPEWA 86


>gi|326559273|gb|EGE09701.1| tolB-like protein [Moraxella catarrhalis 103P14B1]
 gi|326573329|gb|EGE23297.1| tolB-like protein [Moraxella catarrhalis 101P30B1]
          Length = 420

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 155/357 (43%), Gaps = 20/357 (5%)

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS--SPA 149
           TN D +     W + G + ++  +  +   ++L + + + D  +    +     S   PA
Sbjct: 76  TNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPA 135

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           S +     ISD IYQ ITG+  D   +I +V ES       +SL ++D  G  IR L   
Sbjct: 136 SIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTV 195

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              I+  P FSP+   +AY+     ++  +Y++       PK +  F    LAP FS +G
Sbjct: 196 NGSII-TPTFSPDGLSIAYSVQTKNNLPLIYIVPVS-GGTPKLVTPFWGHNLAPSFSPDG 253

Query: 270 KRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ- 327
              L S   ++   +IY ++L +N  + LT       + +Y  D+S  ++ +D+  + Q 
Sbjct: 254 GSILFSGSHENNNPNIYRLNLHTNHLDTLTTLNGAENAPNYLADASGFIYTADKGTRRQS 313

Query: 328 LYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RL 385
           LY      +   +I     ASY  +P  SP G  + +   SG +  I   K    Q  R+
Sbjct: 314 LYRYDFGTTHSTQI-----ASYATNPRLSPDGSKLVY--LSGGQIIIANTKGHIQQSFRV 366

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           L  D    + ++SPSG  +I++  +       + S+  N      I T     DP W
Sbjct: 367 LGTDV---SASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRT--IPTSGTVRDPIW 418


>gi|148656049|ref|YP_001276254.1| WD40 domain-containing protein [Roseiflexus sp. RS-1]
 gi|148568159|gb|ABQ90304.1| WD40 domain protein beta Propeller [Roseiflexus sp. RS-1]
          Length = 567

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 80/164 (48%), Gaps = 5/164 (3%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A DI+S DL       LT     + S S+SP   +IVF S R     LYVM+++GSD +R
Sbjct: 43  AFDIFSADLAGERVVNLTADPHPDRSPSWSPAGDRIVFASRRASNWDLYVMRADGSDLRR 102

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTWSP 399
           +++   A   +P WSP G  IAFT     +  I  +  D G   R+    S    PTW+P
Sbjct: 103 LTE-HPAYDGEPAWSPDGRQIAFTSMRDGQLDIYTLDLDSGDLRRITSHPSADSQPTWAP 161

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQW 442
            GR L F+  +  D+  ++Y  D+ G     L N PA    P W
Sbjct: 162 DGRRLAFTSWR--DSNQEIYITDVEGSTIVNLTNHPAPDHSPAW 203



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 4/163 (2%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +P +S  G R + + ++    D+Y +    +   RLT     +   ++SPD  QI F S 
Sbjct: 68  SPSWSPAGDRIVFASRRASNWDLYVMRADGSDLRRLTEHPAYDGEPAWSPDGRQIAFTSM 127

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R+G+  +Y +  +  D +RI+    A    P W+P G  +AFT +      I +   +GS
Sbjct: 128 RDGQLDIYTLDLDSGDLRRITSHPSADS-QPTWAPDGRRLAFTSWRDSNQEIYITDVEGS 186

Query: 382 Q-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               L    +   +P WSP GR + F   +DG  G  L+  DL
Sbjct: 187 TIVNLTNHPAPDHSPAWSPDGRFIAFISDRDG--GGNLHIADL 227



 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 66/288 (22%), Positives = 126/288 (43%), Gaps = 22/288 (7%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQ 223
           +   + D   RI+F +     G     +   D  G  +  LT  P  D+    P +SP  
Sbjct: 21  VHAAQQDGQGRIVFAASRGDGGAFD--IFSADLAGERVVNLTADPHPDR---SPSWSPAG 75

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            ++ +A+    +   +Y+M  R D +  +R+    +    P +S +G++   +  +D  +
Sbjct: 76  DRIVFASRRASN-WDLYVM--RADGSDLRRLTEHPAYDGEPAWSPDGRQIAFTSMRDGQL 132

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++DL S    R+T+    +   +++PD  ++ F S R+  +++Y+    GS    ++
Sbjct: 133 DIYTLDLDSGDLRRITSHPSADSQPTWAPDGRRLAFTSWRDSNQEIYITDVEGSTIVNLT 192

Query: 343 QDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            +  A    P WSP G  IAF   +  G    I  +   G + R   ++  L+ P W+P 
Sbjct: 193 -NHPAPDHSPAWSPDGRFIAFISDRDGGGNLHIADLVT-GEERRAGPDNLGLRDPAWTPG 250

Query: 401 GRSLIFSRKKDGD------TGSKLYSIDLNGRNETLINTPAYASDPQW 442
           G  +  +    G+       G  L++  L+G    + +   Y + P W
Sbjct: 251 GGLMAVAPWALGERRFFSRQGVALFTPGLSGGTFVVASVHGY-NRPAW 297


>gi|299138486|ref|ZP_07031665.1| WD40 domain protein beta Propeller [Acidobacterium sp. MP5ACTX8]
 gi|298599732|gb|EFI55891.1| WD40 domain protein beta Propeller [Acidobacterium sp. MP5ACTX8]
          Length = 445

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 109/456 (23%), Positives = 196/456 (42%), Gaps = 51/456 (11%)

Query: 16  NLCLLLVLIGGFFPTSIHA---FVKVATNSANYSPVSIAFTKFVSIDELGGKVS--EVVS 70
           N+ L  VL       S+HA   F    +  A    +++A  K  + D    K +    + 
Sbjct: 9   NVSLFAVLFASIAVPSMHAQDWFHLETSGGATRIRIAVANFKPQAGDPAAYKHTFDTTLF 68

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV-------IKEGKDR 123
            DL  + +F+++S+D        P S P  Q   SL                 +    DR
Sbjct: 69  ADLTAAGLFDMVSKDMI------PQSTPGTQAEISLAQWSAAPASAAMIAFGNVGVANDR 122

Query: 124 LRVEFRLWDVKDRK--QIIGKKF--FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           L V   L D K+ +  Q+  K++   +S  S R+IAH  +D+I   + G         ++
Sbjct: 123 LVVNGFLDDAKNAQYPQVFAKQYNEAASDDSARQIAHRFADEIIARLGGGVSGIAETKIY 182

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            S+   +G     +  MD DGAN   +T     I   PR SP+  +VA+++   +D  ++
Sbjct: 183 YSKRTGTG---KEIWEMDYDGANQHEIT-HLGAISISPRVSPDNSRVAFSSLG-KDGFQI 237

Query: 240 YLMDTRIDRAPKRIGNFRSMI---LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            +    +     R+ NF S     ++P ++ +G++   S  +    +I+  D +     +
Sbjct: 238 KMYSLLL----GRLVNFTSAGGTNVSPAWAPSGQQLAFSSSRTGDPEIWISDPEGRVAHK 293

Query: 297 LTNTLFINISASYSPDSS-QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +T+ +  ++S +++P +  QI + S R    QLY+M ++GS  +R++    A+   P WS
Sbjct: 294 ITSFIGPDVSPTWNPKTGGQIAWISGRTHLPQLYIMDADGSGVQRLTDGGYAT--SPSWS 351

Query: 356 PQGDLIAFTKFSGEKFAIG--------VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIF 406
           P G  + F      K+  G        VM+    +   L  D      P+WSP GR ++F
Sbjct: 352 PNGQFLTFAW--DRKYGPGAPGGQDIYVMEIASKKWIQLTHDIGPCDFPSWSPDGRHIVF 409

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           +      T  ++ S+  +G  +  + T A +  P W
Sbjct: 410 ANGNGAHT--RIMSMLADGTQKQAL-TGAGSDMPNW 442


>gi|301513293|ref|ZP_07238530.1| translocation protein TolB [Acinetobacter baumannii AB058]
          Length = 258

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 120/236 (50%), Gaps = 28/236 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +L + D DG   + +  SRD IL  P ++P+ +K+AY +++ +    +YL D       +
Sbjct: 9   TLQIADTDGEQPKTVLSSRDPIL-SPAWTPDAKKIAYVSFETKRPA-IYLQDLSTGTR-E 65

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            + +F+ +  AP FS +GK  L +   +   +IY +DL +   +R+TN   I+  A Y+P
Sbjct: 66  VLTSFKGLNGAPSFSPDGKSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSGIDTEARYTP 125

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D    +F SDR G  Q+Y         KR++       F   ++ +G L A     G+K 
Sbjct: 126 DGKAFIFTSDRGGSPQIYRYDFGNGSVKRLT-------FKGSFNARGTLSA----DGKKI 174

Query: 372 AIGVMKKDGSQERLLVEDSNL------------QAPTWSPSGRSLIFSRKKDGDTG 415
           A+ V +  GS  ++ ++D N             ++P++SP+G+ ++++  ++G+ G
Sbjct: 175 AL-VHRPSGSNYKVAIQDINTGIVNILTPTSLDESPSFSPNGQMVVYA-TREGNRG 228


>gi|326567863|gb|EGE17964.1| tolB-like protein [Moraxella catarrhalis 12P80B1]
          Length = 420

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 155/357 (43%), Gaps = 20/357 (5%)

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS--SPA 149
           TN D +     W + G + ++  +  +   ++L + + + D  +    +     S   PA
Sbjct: 76  TNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPA 135

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           S +     ISD IYQ ITG+  D   +I +V ES       +SL ++D  G  IR L   
Sbjct: 136 SIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTV 195

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              I+  P FSP+   +AY+     ++  +Y++       PK +  F    LAP FS +G
Sbjct: 196 NGSII-TPTFSPDGLSIAYSVQTKNNLPIIYIVSVS-GGTPKLVTPFWGHNLAPSFSPDG 253

Query: 270 KRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ- 327
              L S   ++   +IY ++L +N  + LT       + +Y  D+S  ++ +D+  + Q 
Sbjct: 254 GSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRHQS 313

Query: 328 LYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RL 385
           LY      +   +I     ASY  +P  SP G  + +   SG +  I   K    Q  R+
Sbjct: 314 LYRYDFGTTHSTQI-----ASYATNPRLSPDGSKLVY--LSGGQIIIANTKGRIQQSFRV 366

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           L  D    + ++SPSG  +I++  +       + S+  N      I T     DP W
Sbjct: 367 LGTDV---SASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRT--IPTSGTVRDPIW 418


>gi|91793532|ref|YP_563183.1| WD-40-like beta propeller repeat-containing protein [Shewanella
           denitrificans OS217]
 gi|91715534|gb|ABE55460.1| WD40-like beta Propeller [Shewanella denitrificans OS217]
          Length = 292

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 102/200 (51%), Gaps = 8/200 (4%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA-TYDDEDIL---RVYLMDTRID 247
           S+  M+ DG N + LT  +++    P +SP+ +K+ +A  Y D + +    ++LM+    
Sbjct: 88  SIHTMNSDGTNWKRLTHEKNKWDSVPAWSPDGKKIVFAREYKDPEGVFQAEIWLMNADGS 147

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +   +I + +     P F+ +G+    S   D+  +I   ++  +   +LT+        
Sbjct: 148 KQ-TQIESLKGS--NPHFTPDGRIVFSSEFNDKKSEISIANIDGSKVIQLTDNEAEEWHP 204

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             SPD   I F S R+G +++YVM S+GS+QKR++ +     F P WSP    I FT F+
Sbjct: 205 EVSPDGKHIAFMSKRDGNQEIYVMNSDGSNQKRLTFNNVGDSF-PSWSPDSSEILFTHFA 263

Query: 368 GEKFAIGVMKKDGSQERLLV 387
              + I +M KDGS  R ++
Sbjct: 264 DTGWDIYIMNKDGSSSRKIL 283



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 98/213 (46%), Gaps = 10/213 (4%)

Query: 219 FSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +SP+ +K+A   Y DD     ++ M++      +           P +S +GK+ + + +
Sbjct: 68  WSPDGKKIAVRQYHDDGKTWSIHTMNSDGTNWKRLTHEKNKWDSVPAWSPDGKKIVFARE 127

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESD-REGKEQLYVMQS 333
             +   ++  ++     +    T   ++  S   ++PD  +IVF S+  + K ++ +   
Sbjct: 128 YKDPEGVFQAEIWLMNADGSKQTQIESLKGSNPHFTPDG-RIVFSSEFNDKKSEISIANI 186

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNL 392
           +GS   +++ D EA  + P  SP G  IAF         I VM  DGS Q+RL   +   
Sbjct: 187 DGSKVIQLT-DNEAEEWHPEVSPDGKHIAFMSKRDGNQEIYVMNSDGSNQKRLTFNNVGD 245

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             P+WSP    ++F+     DTG  +Y ++ +G
Sbjct: 246 SFPSWSPDSSEILFTHF--ADTGWDIYIMNKDG 276



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/270 (21%), Positives = 119/270 (44%), Gaps = 48/270 (17%)

Query: 107 GAQVLVTGRVIKEGKDRLRV-----EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
           G+++ +T R   EG+  + +     ++  W   D K+I  +++     +W    HT++ D
Sbjct: 42  GSKIYLTDR---EGQSSINIPNVTGDYVTWS-PDGKKIAVRQYHDDGKTWS--IHTMNSD 95

Query: 162 --IYQSITGEKGDFNS---------RILFVSE-SVVSGIIKNSLCVMDRDGANIR----- 204
              ++ +T EK  ++S         +I+F  E     G+ +  + +M+ DG+        
Sbjct: 96  GTNWKRLTHEKNKWDSVPAWSPDGKKIVFAREYKDPEGVFQAEIWLMNADGSKQTQIESL 155

Query: 205 -----YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
                + TP   +I+F   F+  + +++ A  D   +++  L D   +            
Sbjct: 156 KGSNPHFTPD-GRIVFSSEFNDKKSEISIANIDGSKVIQ--LTDNEAEE----------- 201

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              P  S +GK      ++D   +IY ++   +  +RLT     +   S+SPDSS+I+F 
Sbjct: 202 -WHPEVSPDGKHIAFMSKRDGNQEIYVMNSDGSNQKRLTFNNVGDSFPSWSPDSSEILFT 260

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASY 349
              +    +Y+M  +GS  ++I   ++A +
Sbjct: 261 HFADTGWDIYIMNKDGSSSRKILSGRDAMF 290


>gi|326566623|gb|EGE16765.1| tolB-like protein [Moraxella catarrhalis BC1]
 gi|326576855|gb|EGE26761.1| tolB-like protein [Moraxella catarrhalis O35E]
          Length = 420

 Score = 86.7 bits (213), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 155/357 (43%), Gaps = 20/357 (5%)

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS--SPA 149
           TN D +     W + G + ++  +  +   ++L + + + D  +    +     S   PA
Sbjct: 76  TNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPA 135

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           S +     ISD IYQ ITG+  D   +I +V ES       +SL ++D  G  IR L   
Sbjct: 136 SIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTV 195

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              I+  P FSP+   +AY+     ++  +Y++       PK +  F    LAP FS +G
Sbjct: 196 NGSII-TPTFSPDGLSIAYSVQTKNNLPIIYIVSVS-GGTPKLVTPFWGHNLAPSFSPDG 253

Query: 270 KRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ- 327
              L S   ++   +IY ++L +N  + LT       + +Y  D+S  ++ +D+  + Q 
Sbjct: 254 SSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRRQS 313

Query: 328 LYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RL 385
           LY      +   +I     ASY  +P  SP G  + +   SG +  I   K    Q  R+
Sbjct: 314 LYRYDFGTTHSTQI-----ASYATNPRLSPDGSKLVY--LSGGQIIIANTKGRIQQSFRV 366

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           L  D    + ++SPSG  +I++  +       + S+  N      I T     DP W
Sbjct: 367 LGTDV---SASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRT--IPTSGTVRDPIW 418


>gi|326560194|gb|EGE10582.1| tolB-like protein [Moraxella catarrhalis 7169]
 gi|326564933|gb|EGE15135.1| tolB-like protein [Moraxella catarrhalis 46P47B1]
 gi|326570295|gb|EGE20340.1| tolB-like protein [Moraxella catarrhalis BC8]
 gi|326575773|gb|EGE25696.1| tolB-like protein [Moraxella catarrhalis CO72]
          Length = 420

 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 155/357 (43%), Gaps = 20/357 (5%)

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS--SPA 149
           TN D +     W + G + ++  +  +   ++L + + + D  +    +     S   PA
Sbjct: 76  TNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPA 135

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           S +     ISD IYQ ITG+  D   +I +V ES       +SL ++D  G  IR L   
Sbjct: 136 SIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTV 195

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              I+  P FSP+   +AY+     ++  +Y++       PK +  F    LAP FS +G
Sbjct: 196 NGSII-TPTFSPDGLSIAYSVQTKNNLPIIYIVSVS-GGTPKLVTPFWGHNLAPSFSPDG 253

Query: 270 KRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ- 327
              L S   ++   +IY ++L +N  + LT       + +Y  D+S  ++ +D+  + Q 
Sbjct: 254 GSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRRQS 313

Query: 328 LYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RL 385
           LY      +   +I     ASY  +P  SP G  + +   SG +  I   K    Q  R+
Sbjct: 314 LYRYDFGTTHSTQI-----ASYATNPRLSPDGSKLVY--LSGGQIIIANTKGRIQQSFRV 366

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           L  D    + ++SPSG  +I++  +       + S+  N      I T     DP W
Sbjct: 367 LGTDV---SASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRT--IPTSGTVRDPIW 418


>gi|167946735|ref|ZP_02533809.1| TolB [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 286

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 91/166 (54%), Gaps = 3/166 (1%)

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +S DL RS  F ++ ++      ++ D +  F+DW  LG + LV G++   G     V F
Sbjct: 1   ISADLHRSGRFKVLPREDLLALPSSGDEV-EFKDWRILGVENLVVGQIQPNGPGGYIVRF 59

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV-SESVVSG 187
           +L+DV   +Q+ G    ++  + R  AH ++D IY+ + G KG F +RI ++ S+   +G
Sbjct: 60  QLFDVFRGEQLTGYSIPTTAPNLRSTAHHVADLIYEVLLGMKGAFATRIAYITSQQGANG 119

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             + +L V D DG N   +  S  + L  P +SP+ +K+AY ++++
Sbjct: 120 EQQVALRVADADGHNPETIV-SSSEPLMSPAWSPDGRKIAYVSFEN 164


>gi|213582179|ref|ZP_03364005.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 172

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 92/174 (52%), Gaps = 4/174 (2%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +++ +TG KG F +RI +V ++   G     L V D DG N +++     Q L  P +SP
Sbjct: 1   VFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSP 58

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  K+AY T+  E      ++ T  + A +++ +F     AP FS +G +   ++ K  +
Sbjct: 59  DGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGTKLAFALSKTGS 116

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y M  NG
Sbjct: 117 LNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQVYKMNING 170



 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 6/123 (4%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +S ++SPD S++ + +   G+  L +   +NG+ ++  S  +      P +SP G  +AF
Sbjct: 52  MSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNG--APAFSPDGTKLAF 109

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    + VM     Q R + +  SN   PTW P  ++L F+  + G    ++Y ++
Sbjct: 110 ALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGR--PQVYKMN 167

Query: 423 LNG 425
           +NG
Sbjct: 168 ING 170



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 17/129 (13%)

Query: 329 YVMQSNGSD---QKRISQDKEASYF----------DPVWSPQGDLIAFTKFSGEKFAIGV 375
           YV+Q+NG     + R+S     + F           P WSP G  +A+  F   + A+ +
Sbjct: 18  YVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVI 77

Query: 376 MK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT 433
               +G+  ++     +  AP +SP G  L F+  K G     LY +DL +G+   + + 
Sbjct: 78  QTLANGAVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSL--NLYVMDLASGQIRQITDG 135

Query: 434 PAYASDPQW 442
            +  ++P W
Sbjct: 136 RSNNTEPTW 144


>gi|58700237|ref|ZP_00374719.1| tolB protein, putative [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533245|gb|EAL57762.1| tolB protein, putative [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 226

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 20/219 (9%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI----DELGGKVSEVVSKDLQR 75
           L++ I  F P    A + V    ++   + +  +K         EL   +++V+  +L  
Sbjct: 7   LVLFISLFIPYFTKAALYVDIKKSSVGNIGLVVSKCTCKTALESELSENIAKVIGTNLSN 66

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
             +FN+       ++    +S    + W S     +VT  + +     L + FRL+D   
Sbjct: 67  CGLFNV-------KRGAEAES----KSWKS---DTVVTVSLSEISGSALELSFRLFDTFT 112

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLC 194
           +++++ +        WRKI H +SD I+  + GEKG FN++I +++E   S       + 
Sbjct: 113 KRELLTQSVVFPAKDWRKIGHLVSDVIHDRLIGEKGHFNTKITYIAEEKDSNYKSVRKIA 172

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           VM++DG+NI+YLT   D+ +  PRFSPN + + Y +Y +
Sbjct: 173 VMNQDGSNIKYLTNG-DRFVSTPRFSPNGKGIVYISYAN 210


>gi|213423404|ref|ZP_03356391.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 267

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 47/268 (17%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +RI +V ++   G     L V D DG N +++     Q L  P +SP+  K+AY T+  E
Sbjct: 2   TRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTF--E 57

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                 ++ T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S   
Sbjct: 58  SGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQI 117

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEA--- 347
            ++T+    N   ++ PDS  + F SD+ G+ Q+Y M  NG   +RI    SQ+++A   
Sbjct: 118 RQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQVYKMNINGGAAQRITWEGSQNQDADVS 177

Query: 348 ---------------------------------SYFD--PVWSPQGDLIAFTKFSGEKFA 372
                                            ++ D  P  +P G ++ ++   G    
Sbjct: 178 SDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQGMGSV 237

Query: 373 IGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           + ++  DG  + RL   D  +++P WSP
Sbjct: 238 LNLVSTDGRFKARLPATDGQVKSPAWSP 265


>gi|116619651|ref|YP_821807.1| WD40 domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222813|gb|ABJ81522.1| WD40 domain protein beta Propeller [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 464

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/318 (25%), Positives = 143/318 (44%), Gaps = 27/318 (8%)

Query: 138 QIIGKKFFSS--PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           Q+IG ++  S   A  RK+AH  + +I   + G K  F + I F S    SG     +  
Sbjct: 159 QVIGNRYLGSVDEAGARKVAHEFAAEIV-GLFGGKSLFGTHIYFSSNR--SG--HKEIWA 213

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIG 254
           MD DG N R +T   + I   P  SP+  K+A+ ++   +  + ++ +D   D   +   
Sbjct: 214 MDPDGKNQRQIT-RFNSISTYPNVSPDGTKIAFTSWVKGQPAIFIFSVDPVRDL--RFYN 270

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAM--DIYSVDLQSNATERLTNTLFINISASYSPD 312
              S+  A  F+ +GK+ + +      +   I+  +L       +++   I +    +P 
Sbjct: 271 QTASVNQAGSFTPDGKQIVYASSAGNGICCRIFIANLDGTGFRPISSPSAIEVEPKVNPK 330

Query: 313 S-SQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEK 370
           + + IVF S R G +Q+Y M  +G+D +R++    EAS  +P W P G  IAF    G  
Sbjct: 331 TGADIVFSSGRSGPQQIYRMNMDGADVERLTPGVGEAS--NPSWHPDGQHIAFAWTQGYA 388

Query: 371 ------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 F + V  ++  Q  L   D   + P W+P G  ++F++ +     S++Y++  N
Sbjct: 389 TGAFNIFTMNVATREYVQ--LTHGDGKNENPNWAPDGVHIVFAKTRGNS--SQIYTMLAN 444

Query: 425 GRNETLINTPAYASDPQW 442
           G     + T      P W
Sbjct: 445 GTQIQQLTTAGQNERPVW 462


>gi|239906030|ref|YP_002952769.1| putative TolB protein precursor [Desulfovibrio magneticus RS-1]
 gi|239795894|dbj|BAH74883.1| putative TolB protein precursor [Desulfovibrio magneticus RS-1]
          Length = 441

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 91/385 (23%), Positives = 166/385 (43%), Gaps = 19/385 (4%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNP--DSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           K+ ++++KDLQ      ++ Q S   ++     D I  F+ +      VLVT      G 
Sbjct: 65  KLQDLINKDLQFLPFLQIVPQSSVPGQVAGATADQI-DFKPFGLAKIDVLVTAN-WTPGG 122

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
           +   VE R ++V  +K ++GK + + + A    IA     ++ Q++TG+ G FNS+I FV
Sbjct: 123 NLGNVELRAFEVYSQKVLVGKGYDAVTDAQLPDIADRFCMELMQALTGQGGFFNSQIAFV 182

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILRV 239
             S   G     +  +   G  +  +T   +  +   P +S + +++ +           
Sbjct: 183 KPSAGKGA---DIWTVRPTGRGLNRVTNYNELGMAVSPSWSFDGRRIVFTLIGSRGH--- 236

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           YL        P+      + +++P F  +G+ A +S+      DIY ++      + L +
Sbjct: 237 YLGVWSGGGKPQVYTLPSTNVVSPHFLPDGQVA-VSLTMHGKADIYLLNSAYQPGQPLVS 295

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              I +S +++     + + SD  G   +YV   +G   +R++     +  +P  SP G 
Sbjct: 296 GSGIEVSPTFAASGGAMAYVSDGTGSPNIYVTTVHGGAGRRVTTSGYNT--NPSMSPDGK 353

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKL 418
           LIAFTK  G    + VM     QE  +       + P++SP G  + FS  + G    K+
Sbjct: 354 LIAFTKQLGGAQKVFVMDLATGQETQVTSGGGSDENPSFSPDGYFIAFSSTRSGQ--KKI 411

Query: 419 YSIDLNGRNETLINTP-AYASDPQW 442
           +    +G    +I T    A  P W
Sbjct: 412 FVTTRHGAPPVMIPTGDGAAYMPSW 436



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 4/148 (2%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           S   I   P F+ +   +AY + D      +Y+  T +     R          P  S +
Sbjct: 295 SGSGIEVSPTFAASGGAMAYVS-DGTGSPNIYV--TTVHGGAGRRVTTSGYNTNPSMSPD 351

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           GK    + Q   A  ++ +DL +    ++T+    + + S+SPD   I F S R G++++
Sbjct: 352 GKLIAFTKQLGGAQKVFVMDLATGQETQVTSGGGSDENPSFSPDGYFIAFSSTRSGQKKI 411

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +V   +G+    I     A+Y  P W P
Sbjct: 412 FVTTRHGAPPVMIPTGDGAAYM-PSWGP 438


>gi|297183216|gb|ADI19356.1| periplasmic component of the tol biopolymer transport system
           [uncultured Chloroflexi bacterium HF0500_03M05]
          Length = 284

 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 129/254 (50%), Gaps = 13/254 (5%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +L VM+  G + R +  S      +P++SPN  ++AY   + E+   +Y+++      P 
Sbjct: 41  ALEVMEVSGTS-RQVLASASGTHRDPQWSPNDIRIAYIAENGEETY-LYVINAN-GTQPM 97

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            + +     +   +S +G   + +V + E   IY  +       R T+T   + S  +S 
Sbjct: 98  LLTSVPGNEIG-GWSPDGTSVVFAVSEGEEQGIYIRNPDGVNEFRRTDTP--DFSPVWST 154

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGE 369
           DS +I F S R+G  ++YVM ++GS+Q R+++  EA  +D  WSP G+ + F   +    
Sbjct: 155 DSERIAFLSRRDGNPEIYVMNTDGSNQFRLTE-TEALEYDISWSPNGERLLFVSERDGNA 213

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +  I  ++ D SQ RL   +   + P WSP+G  + F+   D DT  +++ +D +G N+T
Sbjct: 214 EIYIAELESD-SQVRLTHNEVKDEHPVWSPNGDKIAFTSHLDADT--EIFIMDSDGDNQT 270

Query: 430 -LINTPAYASDPQW 442
            L N  +  ++P W
Sbjct: 271 RLTNNESEDTNPSW 284



 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 96/190 (50%), Gaps = 13/190 (6%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           I G   D  S +  VSE    GI      + + DG N    T + D   F P +S + ++
Sbjct: 107 IGGWSPDGTSVVFAVSEGEEQGI-----YIRNPDGVNEFRRTDTPD---FSPVWSTDSER 158

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           +A+ +  D +   +Y+M+T  D + + R+    ++     +S NG+R L   ++D   +I
Sbjct: 159 IAFLSRRDGN-PEIYVMNT--DGSNQFRLTETEALEYDISWSPNGERLLFVSERDGNAEI 215

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           Y  +L+S++  RLT+    +    +SP+  +I F S  +   ++++M S+G +Q R++ +
Sbjct: 216 YIAELESDSQVRLTHNEVKDEHPVWSPNGDKIAFTSHLDADTEIFIMDSDGDNQTRLT-N 274

Query: 345 KEASYFDPVW 354
            E+   +P W
Sbjct: 275 NESEDTNPSW 284



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 8/165 (4%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +D    +   LT +     S   S D   + F S       L VM+ +G+  +++     
Sbjct: 1   MDSDGTSARNLTKSAIDEFSPVVSSDGKLVAFLSGSGDNIALEVMEVSGT-SRQVLASAS 59

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            ++ DP WSP    IA+   +GE+  + V+  +G+Q  LL      +   WSP G S++F
Sbjct: 60  GTHRDPQWSPNDIRIAYIAENGEETYLYVINANGTQPMLLTSVPGNEIGGWSPDGTSVVF 119

Query: 407 SRKKDGDTGSKLYSIDLNGRNE-----TLINTPAYASDPQWVGFM 446
           +  +  + G  +Y  + +G NE     T   +P +++D + + F+
Sbjct: 120 AVSEGEEQG--IYIRNPDGVNEFRRTDTPDFSPVWSTDSERIAFL 162



 Score = 44.3 bits (103), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 39/183 (21%), Positives = 79/183 (43%), Gaps = 6/183 (3%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +P  SS+GK         + + +  +++   + + L +    +    +SP+  +I + +
Sbjct: 19  FSPVVSSDGKLVAFLSGSGDNIALEVMEVSGTSRQVLASASGTHRDPQWSPNDIRIAYIA 78

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +   +  LYV+ +NG+    ++           WSP G  + F    GE+  I +   DG
Sbjct: 79  ENGEETYLYVINANGTQPMLLTSVPGNEIGG--WSPDGTSVVFAVSEGEEQGIYIRNPDG 136

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASD 439
             E    +  +  +P WS     + F  ++DG+   ++Y ++ +G N+  L  T A   D
Sbjct: 137 VNEFRRTDTPDF-SPVWSTDSERIAFLSRRDGN--PEIYVMNTDGSNQFRLTETEALEYD 193

Query: 440 PQW 442
             W
Sbjct: 194 ISW 196


>gi|296113200|ref|YP_003627138.1| tolB-like protein [Moraxella catarrhalis RH4]
 gi|295920894|gb|ADG61245.1| tolB-like protein [Moraxella catarrhalis RH4]
          Length = 420

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 155/357 (43%), Gaps = 20/357 (5%)

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS--SPA 149
           TN D +     W + G + ++  +  +   ++L + + + D  +    +     S   PA
Sbjct: 76  TNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPA 135

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           S +     ISD IYQ ITG+  D   +I +V ES       +SL ++D  G  IR L   
Sbjct: 136 SIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTV 195

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              I+ +  FSP+   +AY+     ++  +Y++       PK +  F    LAP FS +G
Sbjct: 196 NGSIITQ-TFSPDGLSIAYSVQTKNNLPIIYIVSVS-GGTPKLVTPFWGHNLAPSFSPDG 253

Query: 270 KRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ- 327
              L S   ++   +IY ++L +N  + LT       + +Y  D+S  ++ +D+  + Q 
Sbjct: 254 GSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGTRRQS 313

Query: 328 LYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RL 385
           LY      +   +I     ASY  +P  SP G  + +   SG +  I   K    Q  R+
Sbjct: 314 LYRYDFATTHSTQI-----ASYATNPRLSPDGSKLVY--LSGGQIIIANTKGRIQQSFRV 366

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           L  D    + ++SPSG  +I++  +       + S+  N      I T     DP W
Sbjct: 367 LGTDV---SASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRT--IPTSGTVRDPIW 418


>gi|256828400|ref|YP_003157128.1| WD40 domain-containing protein beta Propeller [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577576|gb|ACU88712.1| WD40 domain protein beta Propeller [Desulfomicrobium baculatum DSM
           4028]
          Length = 439

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 145/337 (43%), Gaps = 16/337 (4%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITG 168
           VLVT            VE R ++V   + I+GK +  ++     ++A     D+ +++TG
Sbjct: 112 VLVTAAWAPRPGGVGEVELRAYEVYTGRLIVGKGYGVANNQQIPEVAARFCADLMEALTG 171

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           +   F S I FV +       +  + +    G N++ +T + D I   P +S + QK+ +
Sbjct: 172 QGDFFRSNIAFVKKEGQ----RKQVYMATAQGLNLQKIT-NLDGIAVSPAWSHDGQKLVF 226

Query: 229 ATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              D +   L V+   TR     +  GN    ++AP F+  G  A IS+      DIY +
Sbjct: 227 VFLDKKYHNLCVWDRQTRTLDKKRLPGN---TLIAPAFTKTGNVA-ISLDMRGNPDIYEL 282

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           + +      L     I+I   +     ++VF S+R G   +++        KRIS   + 
Sbjct: 283 NSEYKVVRPLEENWGIDIGPDFDRSGEKMVFVSNRLGNPHVFLKNMVTGQSKRISLTGKY 342

Query: 348 SYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           +   P  SP G  + F +  +G      V    G + +L     + + PTWSP G  + F
Sbjct: 343 NT-GPSISPDGSQVVFAQMVNGNHKLFLVDLASGHERQLTFGPGSDEDPTWSPDGYFIAF 401

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQW 442
           +  + G   SK+Y    +G    LI T P  A+ P W
Sbjct: 402 ASNRSGP--SKIYLTTKHGDEPILIPTGPGEATSPAW 436


>gi|326571032|gb|EGE21056.1| tolB-like protein [Moraxella catarrhalis BC7]
          Length = 420

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 154/357 (43%), Gaps = 20/357 (5%)

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS--SPA 149
           TN D +     W + G + ++  +  +   ++L + + + D  +    +     S   PA
Sbjct: 76  TNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEIIDTANGLVSVKHTQISDNHPA 135

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           S +     ISD IYQ ITG+  D   +I +V ES       +SL ++D  G  IR L   
Sbjct: 136 SIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTV 195

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              I+  P FS +   +AY+     ++  +Y++       PK +  F    LAP FS +G
Sbjct: 196 NGSII-TPTFSSDGLSIAYSVQTKNNLPIIYIVSVS-GGTPKLVTPFWGHNLAPSFSPDG 253

Query: 270 KRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ- 327
              L S   ++   +IY ++L +N  + LT       + +Y  D+S  ++ +D+  + Q 
Sbjct: 254 GSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPNYLADASGFIYTADKGARRQS 313

Query: 328 LYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RL 385
           LY      +   +I     ASY  +P  SP G  + +   SG +  I   K    Q  R+
Sbjct: 314 LYRYDFGTTHSTQI-----ASYATNPRLSPDGSKLVY--LSGGQIIIANTKGRIQQSFRV 366

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           L  D    + ++SPSG  +I++  +       + S+  N      I T     DP W
Sbjct: 367 LGTDV---SASFSPSGTRIIYTSNQGNKNQLMIRSLSSNAIRT--IPTSGTVRDPIW 418


>gi|327399145|ref|YP_004340014.1| WD40-like beta Propeller containing protein [Hippea maritima DSM
           10411]
 gi|327181774|gb|AEA33955.1| WD40-like beta Propeller containing protein [Hippea maritima DSM
           10411]
          Length = 421

 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 167/375 (44%), Gaps = 30/375 (8%)

Query: 37  KVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVSKDLQRSDVFNLISQDSFK----QK 90
           K+  ++  Y P++I    FV  +   +  +    + +DL+ S +F+      F      K
Sbjct: 24  KIEISNPKYKPINIGLWGFVKNTPTSISKRFLSTLKRDLKVSGLFSWDETQHFSYDAPSK 83

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
           + N   I +  +        ++ G    EGK  + V  R+ DV     +  K + ++  S
Sbjct: 84  VVN--GIAKLDN-----LDYVIYGDAYIEGKS-IYVNVRITDVLKNSVLFEKTYTTNEYS 135

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILF-VSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
              +A+ + D +   +TG  G F S+I F + +  VS I      V D +G N+  +T  
Sbjct: 136 LGWLANRVVDVLIGYVTGVYGPFESKIAFALGDGRVSDI-----YVCDFNGENVVRITNW 190

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            +  +     S ++       Y    +   +L +    +  K   N    I A R+   G
Sbjct: 191 HNFNILPKWVSDDELTFLSYRYGKPAL---FLFNVFSGKLSKLFSNSNLSISASRYM--G 245

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
             A I   +  +++IY+V+ +    ++LTN   IN+S +++PD S++VF S+R G  Q+Y
Sbjct: 246 YFA-IPFNRFGSVNIYAVNARGRVIKKLTNDPSINVSPTFTPDFSKMVFVSNRGGNPQIY 304

Query: 330 V--MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +  + S  S  +     K  S   P  SP G  IA+         + VM  DGS +R+++
Sbjct: 305 IKDLSSFDSPVRLTFNGKYNS--SPAVSPDGKKIAYISIDNGTTYLKVMNIDGSNDRVVM 362

Query: 388 EDSNLQAPTWSPSGR 402
           + ++L +P+W+   R
Sbjct: 363 KGNSLDSPSWAYDSR 377


>gi|121591680|ref|ZP_01678914.1| tolB protein [Vibrio cholerae 2740-80]
 gi|121546465|gb|EAX56689.1| tolB protein [Vibrio cholerae 2740-80]
          Length = 265

 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 124/252 (49%), Gaps = 31/252 (12%)

Query: 17  LCLLLVLIG-GFFPTSIHAFVKVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           L  +L+LIG GF   +  A   V T+  + + P++I   K+    +L   VS V++ DLQ
Sbjct: 5   LVFVLMLIGTGFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIASDLQ 64

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV- 133
           RS  F+ +      Q   + + +  F  W S+G   L+TG + +  +    + ++L D+ 
Sbjct: 65  RSGKFSPVPTSKMPQTPYSEEQV-NFGKWTSMGVDSLLTGTITQNAEGSYVISYQLVDIV 123

Query: 134 -------------KDRKQIIGK------KFFSSPAS-WRKIAHTISDDIYQSITGEKGDF 173
                        +D + ++ K      K  + PAS  R+ AH I+D +Y+ +TGE+G F
Sbjct: 124 RGQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGAF 183

Query: 174 NSRILFVSESVVS--GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +RI +V   VV+        L + D DG N R +  S+ Q L  P +SP+ Q +AY ++
Sbjct: 184 LTRIAYV---VVNDKDPYPYQLRIADYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYVSF 239

Query: 232 DDEDILRVYLMD 243
            +     +Y+M+
Sbjct: 240 QNGQA-EIYMMN 250


>gi|149923449|ref|ZP_01911853.1| tolB protein [Plesiocystis pacifica SIR-1]
 gi|149815701|gb|EDM75228.1| tolB protein [Plesiocystis pacifica SIR-1]
          Length = 432

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 164/390 (42%), Gaps = 40/390 (10%)

Query: 63  GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
           GK+ +++ K+ Q S  F +I + S    +       + + W+ +G   +V   +  E   
Sbjct: 67  GKLGDLLRKNAQISAGFEVIPRRSLPGSLVRATGFNK-KAWSDIGNVDVVI--LTSEAGS 123

Query: 123 RLRVEFRLWDV-KDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFV 180
           ++R+   ++++ K  K ++ K +   PA      A+   +++    T E G F SRI FV
Sbjct: 124 QIRIA--MYELSKGDKPVLSKGY---PAGDPLGAANKFMNEVINYYTKEPGVFGSRIAFV 178

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                    KN   V   +G     +T +R   +  P   P  + V + +Y   +     
Sbjct: 179 RTRRNPTTSKNVYTVQ-MNGEATSAVTANRSLNIL-PSMGPGGE-VVFTSYAKRN----- 230

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             D  I   PKR+  +  + L    S +G    +++ KD   +IY++D   N   RLT  
Sbjct: 231 -PDLWISNGPKRVSKYPGLNLGGAVSPDGGTIALALSKDGNAEIYTIDRSGNIKNRLTKN 289

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGD 359
             I+   S+S    QI F SDR G  Q+Y M ++G    R++  K+ SY   P WS    
Sbjct: 290 PAIDGQPSWS-GGGQIAFVSDRAGGPQVYRMSASGGGASRVT--KQGSYNQSPDWSQGAG 346

Query: 360 LIAFTKFSGEK-------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
              +  +SG         F + V  K G   RL         PT+SP GR + +++    
Sbjct: 347 RGQWIVYSGRDSSNRYDIFKVDV--KSGKVVRLTQSPGRNLDPTFSPDGRWVAYNQ---- 400

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             G  +Y  + +G N   I     AS P W
Sbjct: 401 --GGSIYVANEDGNNNVEI--AKGASTPDW 426


>gi|158339964|ref|YP_001521134.1| WD-40-like beta propeller repeat-containing protein [Acaryochloris
           marina MBIC11017]
 gi|158310205|gb|ABW31820.1| WD40-like Beta Propeller, putative [Acaryochloris marina MBIC11017]
          Length = 344

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 141/280 (50%), Gaps = 31/280 (11%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYD 232
           +R+ F+S+   +G  ++ L +++ DG+ +  LT   +RD+   +P +SP+ Q + + +  
Sbjct: 76  TRLAFISDR--NG--QSDLYLINLDGSQLTRLTSHAARDE---DPAWSPDSQHITFVSKR 128

Query: 233 DEDI-----LRVYLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           D +        +YL+   D+ I R  + +G   S    P +S +G++ + S +  +  D+
Sbjct: 129 DANQQHPYNTEIYLLNIKDSEIKRLTEHVGEDSS----PSWSPDGQQIVFSRKIQDNADL 184

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + +  +    ++LT+    + +A +SPD  QIVF S R     LYV+ ++GS+ KR++QD
Sbjct: 185 FLMTPEGTEFKQLTDDPNDDWNADWSPDGQQIVFTSGRSNNVDLYVINADGSNLKRLTQD 244

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRS 403
            E       WSP G  IA+   S  ++ +  +  +G+    +  D  L+ A  W P+   
Sbjct: 245 PEDEN-QGRWSPSGHRIAYISLSQNQWDLYTILPNGTGRTRVTNDDALELAFDWLPNSNK 303

Query: 404 LIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQW 442
           ++F   KDG     +Y  ++ G + + + + P   S P W
Sbjct: 304 ILF-ESKDG-----IYQANVIGSKKQQMTDNPKDGS-PTW 336



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 99/209 (47%), Gaps = 11/209 (5%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A+    D++   ++LM T      KR+        +P +S +G R      ++   D+Y
Sbjct: 33  IAFTGEQDKNNRDIFLM-TADGSNRKRLTTHPGEDWSPVWSPDGTRLAFISDRNGQSDLY 91

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ------LYVMQSNGSDQK 339
            ++L  +   RLT+    +   ++SPDS  I F S R+  +Q      +Y++    S+ K
Sbjct: 92  LINLDGSQLTRLTSHAARDEDPAWSPDSQHITFVSKRDANQQHPYNTEIYLLNIKDSEIK 151

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWS 398
           R+++        P WSP G  I F++   +   + +M  +G++ + L +D N      WS
Sbjct: 152 RLTE-HVGEDSSPSWSPDGQQIVFSRKIQDNADLFLMTPEGTEFKQLTDDPNDDWNADWS 210

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           P G+ ++F+  +  +    LY I+ +G N
Sbjct: 211 PDGQQIVFTSGRSNNV--DLYVINADGSN 237


>gi|258405705|ref|YP_003198447.1| WD40 domain-containing protein beta Propeller [Desulfohalobium
           retbaense DSM 5692]
 gi|257797932|gb|ACV68869.1| WD40 domain protein beta Propeller [Desulfohalobium retbaense DSM
           5692]
          Length = 437

 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 147/327 (44%), Gaps = 28/327 (8%)

Query: 126 VEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           VE RL+DV  ++ ++GK +          +A     +I  ++ G    F SR+ FV ++ 
Sbjct: 124 VELRLFDVFSQRLMLGKGYRIMDQEQVDVVADRFCAEIVDTLAGNGDVFRSRLAFVRQNS 183

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +  I  ++ V  RD   I  L    + +   P +S + +++A+ TY DE   R+ L D 
Sbjct: 184 TAKNIW-TVGVQGRDPKQITRL----EGVSMSPAWSWDGRRMAF-TYLDERRHRLGLWD- 236

Query: 245 RIDRAPKRIGNFRSMIL------APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
                 +  G  ++M+L      +P FS  G+  ++S+      DI+++         L 
Sbjct: 237 ------RDAGQIKAMVLPGNTLISPVFSPQGQ-VVLSLDPYGNPDIFTLSDDWTIESPLV 289

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQ 357
               I+IS  +     ++VF S R G   ++V   +  + +R+S   E +Y   P  SP 
Sbjct: 290 RHWGIDISPQFDEKGEKMVFVSSRLGNPHIFVRDMDSGEVERVS--FEGTYNTSPTISPD 347

Query: 358 GDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           G  +A+++ + +   I V   + G+  ++     N + PTW+P G  L FS  + G    
Sbjct: 348 GRFVAYSRRTDDGHRIVVHDLESGASRQITKGPGNDEDPTWAPDGYFLAFSSNRSGTY-- 405

Query: 417 KLYSIDLNGRNETLINT-PAYASDPQW 442
           KLY    NG     I T P  A+ P W
Sbjct: 406 KLYLTTRNGDTPKQIPTGPGAATAPAW 432


>gi|114321544|ref|YP_743227.1| WD40 domain-containing protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227938|gb|ABI57737.1| WD40 domain protein beta Propeller [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 352

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 2/160 (1%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L    ++ A  IYS  L   A  RLT+    ++   +SPD  +I F S R+G   +Y+M 
Sbjct: 35  LFVSNQEGAQSIYSASLNDGAIVRLTDPAHSDMDPRWSPDRQRIAFVSRRDGNGDIYLMD 94

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SN 391
           ++GS+Q+R++  +   +  P W P GD +AFT        + ++     + RLL E   +
Sbjct: 95  ADGSNQQRLTHSERMDFM-PQWHPSGDYLAFTSSRVSPRGVFLLDLATGEARLLSEAVRS 153

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +A  WSP G  L    +  G+ G+ +  IDL     +++
Sbjct: 154 PEALRWSPDGGQLAVIARPGGEGGNAIMVIDLEDDGHSIL 193



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 60/281 (21%), Positives = 122/281 (43%), Gaps = 22/281 (7%)

Query: 177 ILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           +LFVS +     I   SL     DGA +R   P+   +  +PR+SP++Q++A+ +  D +
Sbjct: 34  VLFVSNQEGAQSIYSASL----NDGAIVRLTDPAHSDM--DPRWSPDRQRIAFVSRRDGN 87

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +YLMD       +R+ +   M   P++  +G     +  +     ++ +DL +    
Sbjct: 88  G-DIYLMDADGSNQ-QRLTHSERMDFMPQWHPSGDYLAFTSSRVSPRGVFLLDLATGEAR 145

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR---ISQDKEASYFDP 352
            L+  +    +  +SPD  Q+   +   G+    +M  +  D      +  D+ A     
Sbjct: 146 LLSEAVRSPEALRWSPDGGQLAVIARPGGEGGNAIMVIDLEDDGHSILVPNDRHAGNVQS 205

Query: 353 V-WSPQGDLIAFTKFSGEKFAIG---VMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFS 407
           + W P GD +A+T  +  +  +    +  ++G  E++     N++  P WS  G  L+++
Sbjct: 206 LAWHPSGDYLAYTASTDNRREVQLYVLHVQEGHSEQVASAPGNVRGFPVWSTDGDWLVYA 265

Query: 408 RKKDG---DTGSKLYSIDL--NGRNETLINTPAYASDPQWV 443
                   +T + +Y+     +GR  T+       + P W+
Sbjct: 266 STATPAPEETKTNIYASRFPDDGRPVTVATLDGQLAQPVWL 306


>gi|94970959|ref|YP_593007.1| WD-40-like beta propeller repeat-containing protein [Candidatus
           Koribacter versatilis Ellin345]
 gi|94553009|gb|ABF42933.1| WD40-like beta Propeller [Candidatus Koribacter versatilis
           Ellin345]
          Length = 298

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 118/258 (45%), Gaps = 31/258 (12%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDILRVYL 241
           SVV+G  K  L  +  DG N   LT  RD    E P +SP+ + VA+     E + +++L
Sbjct: 53  SVVAG--KEQLFRVGLDGKNPLQLT--RDDADHEDPAWSPDGKHVAFVLIH-EKVEQIHL 107

Query: 242 MDTR----IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA------MDIYSVDLQS 291
           MD          PK      S  + P +S + +R +     D A       DI ++D+ +
Sbjct: 108 MDPDGGNVTPLTPKE-----SKTIHPSWSPDSRRVIFCTDDDLAPPKKNDSDILAMDIAT 162

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYF 350
           + T +L +   +N    +SPD +++ F     E   ++++   NGSD K ++ D     F
Sbjct: 163 HETTKLISG-GVNTFPVWSPDGTKLAFRRMLGERNSEVFLANENGSDPKNLTNDPA---F 218

Query: 351 D--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFS 407
           D  P WSP G  IAF         I VM  DGS  R     +    +P WS  G+ L F+
Sbjct: 219 DGWPAWSPDGKQIAFASNRRGNHEIFVMNADGSGVRKAANSEGRATSPKWSKDGKKLYFT 278

Query: 408 RKKDGDTG--SKLYSIDL 423
             K  D G   ++Y+ID+
Sbjct: 279 NCKKVDLGIDCEIYAIDV 296



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 2/109 (1%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N+  ++SPD  ++++ S   GKEQL+ +  +G +  ++++D +A + DP WSP G  +AF
Sbjct: 37  NMDPTFSPDGKEMIYISVVAGKEQLFRVGLDGKNPLQLTRD-DADHEDPAWSPDGKHVAF 95

Query: 364 TKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                +   I +M  DG     L  ++S    P+WSP  R +IF    D
Sbjct: 96  VLIHEKVEQIHLMDPDGGNVTPLTPKESKTIHPSWSPDSRRVIFCTDDD 144



 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 106/238 (44%), Gaps = 17/238 (7%)

Query: 215 FEPRFSPNQQKVAYATY--DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +P FSP+ +++ Y +     E + RV L      + P ++    +    P +S +GK  
Sbjct: 38  MDPTFSPDGKEMIYISVVAGKEQLFRVGL----DGKNPLQLTRDDADHEDPAWSPDGKHV 93

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------REGKE 326
              +  ++   I+ +D        LT      I  S+SPDS +++F +D      ++   
Sbjct: 94  AFVLIHEKVEQIHLMDPDGGNVTPLTPKESKTIHPSWSPDSRRVIFCTDDDLAPPKKNDS 153

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERL 385
            +  M     +  ++      ++  PVWSP G  +AF +  GE+ + + +  ++GS  + 
Sbjct: 154 DILAMDIATHETTKLISGGVNTF--PVWSPDGTKLAFRRMLGERNSEVFLANENGSDPKN 211

Query: 386 LVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           L  D      P WSP G+ + F+  + G+    + + D +G  +   N+   A+ P+W
Sbjct: 212 LTNDPAFDGWPAWSPDGKQIAFASNRRGNHEIFVMNADGSGVRKA-ANSEGRATSPKW 268


>gi|168701247|ref|ZP_02733524.1| tolB protein [Gemmata obscuriglobus UQM 2246]
          Length = 337

 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 119/261 (45%), Gaps = 57/261 (21%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           EP +SP+ +++A+ T D      V+LM+   T  ++  K+ G    +    R+S +GKR 
Sbjct: 67  EPVWSPDGKRIAF-TSDRAGEPDVWLMNADGTEPEQLTKKCGGCTGL----RWSPDGKRI 121

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI----------VFESDR 322
             + +++    + +V++ +    RL +   +   AS+SPD  ++          ++ +  
Sbjct: 122 AFTGRQNGIEQVMAVEVATGKVSRLIDGTVLCRHASWSPDGKKLSFGYFPGRYAIYTATA 181

Query: 323 EGKE---------------------------------QLYVMQSNGSDQKRISQDKE--- 346
           EGKE                                 Q++V+ ++G+++K++++      
Sbjct: 182 EGKELAELTDKKGGLDAAWSPNGQQLAFMTLDADRDWQVFVIGADGNNKKQLTKSANNYG 241

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           A Y  P+WSP G+ I+F +    K  + VM+ DGS  +++          WSP G+SL +
Sbjct: 242 ARY--PLWSPDGNFISFEEIVDGKLQVAVMRADGSDPKVITSKHEHTLTRWSPDGKSLSY 299

Query: 407 SRKKDGDTGSKLYSIDLNGRN 427
           +R + G     L+  D +G N
Sbjct: 300 ARSEKGQL-PALWVSDPDGGN 319



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 4/153 (2%)

Query: 258 SMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           ++  AP   +   R L+ V  +     +IY V   + A  RLT+    +    +SPD  +
Sbjct: 17  ALSTAPVPKAGPPRGLLVVTSNTNGNWEIYLVQASTGAARRLTDNTASDTEPVWSPDGKR 76

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIG 374
           I F SDR G+  +++M ++G++ +++++ K        WSP G  IAFT + +G +  + 
Sbjct: 77  IAFTSDRAGEPDVWLMNADGTEPEQLTK-KCGGCTGLRWSPDGKRIAFTGRQNGIEQVMA 135

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           V    G   RL+      +  +WSP G+ L F 
Sbjct: 136 VEVATGKVSRLIDGTVLCRHASWSPDGKKLSFG 168



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 4/190 (2%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +YL+      A +R+ +  +    P +S +GKR   +  +    D++ ++      E+LT
Sbjct: 45  IYLVQASTGAA-RRLTDNTASDTEPVWSPDGKRIAFTSDRAGEPDVWLMNADGTEPEQLT 103

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                     +SPD  +I F   + G EQ+  ++       R+  D         WSP G
Sbjct: 104 KKCGGCTGLRWSPDGKRIAFTGRQNGIEQVMAVEVATGKVSRLI-DGTVLCRHASWSPDG 162

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             ++F  F G ++AI     +G +   L +        WSP+G+ L F    D D   ++
Sbjct: 163 KKLSFGYFPG-RYAIYTATAEGKELAELTDKKGGLDAAWSPNGQQLAF-MTLDADRDWQV 220

Query: 419 YSIDLNGRNE 428
           + I  +G N+
Sbjct: 221 FVIGADGNNK 230


>gi|145640336|ref|ZP_01795920.1| translocation protein TolB precursor [Haemophilus influenzae R3021]
 gi|145274922|gb|EDK14784.1| translocation protein TolB precursor [Haemophilus influenzae
           22.4-21]
          Length = 292

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 116/227 (51%), Gaps = 13/227 (5%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S++V+ DL+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G +  
Sbjct: 62  ISKIVADDLRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSG-NGY 119

Query: 125 RVEFRLWDVKDRKQIIGKKF----FSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILF 179
            + ++L D        G       ++    W R  AHT+SD++++ ++G +G F +RI +
Sbjct: 120 SITYQLIDTVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLSGIRGAFRTRIAY 179

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++   + 
Sbjct: 180 VVQK-NGGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENK---KS 234

Query: 240 YLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            L+   ++   ++ + +F+    AP FS +G R   +  +D  ++IY
Sbjct: 235 QLVVQDLNSGTRKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIY 281



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 54/124 (43%), Gaps = 5/124 (4%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY---VMQSNGSDQKRISQDKEASY 349
               +++ +F  +S       ++I +   + G  Q Y   V   +G +Q  +++  +   
Sbjct: 154 GAHTVSDEVFEKLSGIRGAFRTRIAYVVQKNGGSQPYEVRVADYDGYNQFIVNRSAQ-PI 212

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR 408
             P WSP G  +A+  F  +K  + V   +    +++     +  AP +SP G  L F+ 
Sbjct: 213 MSPAWSPDGQRLAYVSFENKKSQLVVQDLNSGTRKVVASFQGHNGAPAFSPDGSRLAFAS 272

Query: 409 KKDG 412
            +DG
Sbjct: 273 SRDG 276


>gi|301058338|ref|ZP_07199371.1| TolB amino-terminal domain protein [delta proteobacterium NaphS2]
 gi|300447574|gb|EFK11306.1| TolB amino-terminal domain protein [delta proteobacterium NaphS2]
          Length = 215

 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 81/150 (54%), Gaps = 7/150 (4%)

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP--DSIPRFQDWNSLGAQVLVTGRVI 117
           EL  ++  VVS DL  S  FN + + SF +    P       F+DW+ +GA++L+ G   
Sbjct: 59  ELSSELPGVVSNDLDLSGYFNPLDKASFLEGKNGPIKGKDINFKDWSVIGAELLLKGGYT 118

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
             G ++L VE RL+DV   +QI+GK+   S   +R + H +S++I + +TG +G   +R+
Sbjct: 119 CSG-NQLEVEIRLFDVFFGRQILGKRAIGSLDDYRHLMHRLSNEIIKRLTGHEGISMTRL 177

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
            FV  +      +  +   D DG N+R LT
Sbjct: 178 AFVGTATG----QREIYACDYDGRNVRPLT 203


>gi|196229417|ref|ZP_03128282.1| peptidase M28 [Chthoniobacter flavus Ellin428]
 gi|196226649|gb|EDY21154.1| peptidase M28 [Chthoniobacter flavus Ellin428]
          Length = 988

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 28/191 (14%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F ++GK+   S   D+ MDIYS +        LTN+   +   S+SPD  QIVF S R  
Sbjct: 121 FRASGKQRRYSWDYDQTMDIYSCNQDGTQMVNLTNSPGYDAEGSFSPDGKQIVFCSLRAA 180

Query: 325 -------KEQ-------------LYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIA 362
                   EQ             +Y+M ++GS+ +R++   +A  +D  P +SP G  I 
Sbjct: 181 FPLEKLTPEQRARYEKDPAYFGDIYLMNADGSNVRRLT---DAPGYDGGPFFSPDGARII 237

Query: 363 FTKF--SGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLY 419
           +  F  SG    +  MK DGS +  + +  ++  AP + PSG+ +IF+  K G T  +LY
Sbjct: 238 WRHFDESGMFADVWTMKLDGSDKHRVTDFKSMSWAPFYHPSGKYIIFTSNKLGFTNFELY 297

Query: 420 SIDLNGRNETL 430
            +D+NG +E +
Sbjct: 298 IVDVNGDHEPV 308



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 79/151 (52%), Gaps = 14/151 (9%)

Query: 193 LCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILR-VYLMDTRIDRA 249
           + +M+ DG+N+R LT  P  D     P FSP+  ++ +  +D+  +   V+ M  ++D +
Sbjct: 204 IYLMNADGSNVRRLTDAPGYDG---GPFFSPDGARIIWRHFDESGMFADVWTM--KLDGS 258

Query: 250 PK-RIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATE-RLTNTLFINI 305
            K R+ +F+SM  AP +  +GK  + +  K      ++Y VD+  +    R+T T   + 
Sbjct: 259 DKHRVTDFKSMSWAPFYHPSGKYIIFTSNKLGFTNFELYIVDVNGDHEPVRVTYTDGFDG 318

Query: 306 SASYSPDSSQIVFESDR--EGKEQLYVMQSN 334
              +SP+  +I + S R  +GK Q+++   N
Sbjct: 319 LPVFSPNGKKISWTSGRTSDGKSQIFLADWN 349


>gi|260062320|ref|YP_003195400.1| tolB protein [Robiginitalea biformata HTCC2501]
 gi|88783882|gb|EAR15053.1| tolB protein [Robiginitalea biformata HTCC2501]
          Length = 303

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 108/229 (47%), Gaps = 14/229 (6%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN   LT   D + F P +S +   +++ +  D +   +Y MD +  R   R+ 
Sbjct: 49  IMDGDGANPENLT-RHDSLDFSPSWSADGTSLSFYSKRDGNA-EIYRMDLQT-RQLTRLT 105

Query: 255 NFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           N  +  + P  S +G + L    +D  + ++Y +D   +   +LT       S  +SPD 
Sbjct: 106 NHPATDVLPVPSPDGSQILFMSDRDSLSRNVYVMDKDGSGIRQLTRNAAYEESPEWSPDG 165

Query: 314 SQIVF--------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           SQI F        ++   G  ++++M + G   KR++ DKE       +SP G  IAF  
Sbjct: 166 SQIAFTRQLRDSSDTSHAGNGEIFLMDAQGGGVKRLT-DKEGYDSGAKFSPDGSKIAFYG 224

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGD 413
              +++ +  +  DG+  + L  D+    +P WSP G  L+++    G+
Sbjct: 225 AQEDQWDLYTINADGTGLQNLTNDAIECYSPDWSPDGEWLVYTAGSKGN 273



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 119/240 (49%), Gaps = 30/240 (12%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           K+A+ T D +    VY+MD   D A P+ +    S+  +P +S++G       ++D   +
Sbjct: 34  KIAFVT-DRDGNPEVYIMDG--DGANPENLTRHDSLDFSPSWSADGTSLSFYSKRDGNAE 90

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRIS 342
           IY +DLQ+    RLTN    ++    SPD SQI+F SDR+     +YVM  +GS  ++++
Sbjct: 91  IYRMDLQTRQLTRLTNHPATDVLPVPSPDGSQILFMSDRDSLSRNVYVMDKDGSGIRQLT 150

Query: 343 QDKEASYFD-PVWSPQGDLIAFTK-----------FSGEKFAIGVMKKDGSQERLLVEDS 390
             + A+Y + P WSP G  IAFT+            +GE F +    + G  +RL  ++ 
Sbjct: 151 --RNAAYEESPEWSPDGSQIAFTRQLRDSSDTSHAGNGEIFLMDA--QGGGVKRLTDKEG 206

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLIN------TPAYASDPQWV 443
                 +SP G  + F   ++      LY+I+ +G   + L N      +P ++ D +W+
Sbjct: 207 YDSGAKFSPDGSKIAFYGAQEDQW--DLYTINADGTGLQNLTNDAIECYSPDWSPDGEWL 264



 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 46/225 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDD 233
           S+ILF+S+      +  ++ VMD+DG+ IR LT  R+    E P +SP+  ++A+     
Sbjct: 121 SQILFMSDRDS---LSRNVYVMDKDGSGIRQLT--RNAAYEESPEWSPDGSQIAF----- 170

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                     TR  R      +          + NG+             I+ +D Q   
Sbjct: 171 ----------TRQLRDSSDTSH----------AGNGE-------------IFLMDAQGGG 197

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            +RLT+    +  A +SPD S+I F   +E +  LY + ++G+  + ++ D    Y  P 
Sbjct: 198 VKRLTDKEGYDSGAKFSPDGSKIAFYGAQEDQWDLYTINADGTGLQNLTNDAIECY-SPD 256

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTW 397
           WSP G+ + +T  S   + I  +  +   + RL       +AP+W
Sbjct: 257 WSPDGEWLVYTAGSKGNYNIWKINIRTKERVRLTRTSGRNEAPSW 301



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 10/135 (7%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S +I F +DR+G  ++Y+M  +G++ + +++  ++  F P WS  G  ++F  +S     
Sbjct: 32  SGKIAFVTDRDGNPEVYIMDGDGANPENLTR-HDSLDFSPSWSADGTSLSF--YSKRDGN 88

Query: 373 IGVMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN- 427
             + + D  Q R L   +N  A    P  SP G  ++F   +D      +Y +D +G   
Sbjct: 89  AEIYRMD-LQTRQLTRLTNHPATDVLPVPSPDGSQILFMSDRD-SLSRNVYVMDKDGSGI 146

Query: 428 ETLINTPAYASDPQW 442
             L    AY   P+W
Sbjct: 147 RQLTRNAAYEESPEW 161


>gi|294505693|ref|YP_003569754.1| TolB protein precursor [Salinibacter ruber M8]
 gi|294342132|emb|CBH22796.1| TolB protein precursor [Salinibacter ruber M8]
          Length = 543

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 117/270 (43%), Gaps = 29/270 (10%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-------PK 251
           DG+N+R +T S   I   P +SP+  ++A+      D     +   R D +       P 
Sbjct: 273 DGSNLRQVTNSATGI--SPTWSPDGSRIAFTADGGGDDANDPIATIRPDGSDLSPVTDPA 330

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE-AMD-----IYSVDLQSNATERLTNTLFINI 305
            + + R   +AP +S +G R   S   D  A D     IY+VD   +   ++     I  
Sbjct: 331 DVEDGRIADVAPEWSPSGDRIAFSRDPDTTARDTTEPRIYTVDPDGSDLRQVAEDKAIGF 390

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ----DKEASYFDPVWSPQGDLI 361
           + ++SPD S+I F +  +    ++ ++ +GSD ++++     D  +    P WSP G  I
Sbjct: 391 NPTWSPDGSRIAFSTPAD-PSVIFTIRPDGSDLRQVTDRSDIDGNSGDLAPAWSPDGSRI 449

Query: 362 AF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKDGD 413
           AF   +  G  F I  +  DGS  + +    +        +P WSP G  ++F   +DG 
Sbjct: 450 AFQSDRDGGSSFDIYTVDPDGSDLKQVTTAGDRDDRVDDISPAWSPDGSRIVFGSNRDGS 509

Query: 414 TGSKLYSIDLNGRN-ETLINTPAYASDPQW 442
               +Y+I  +G   E + N       P W
Sbjct: 510 AVPDIYTIRPDGSELERITNNDRLDFGPAW 539


>gi|298529978|ref|ZP_07017380.1| WD40 domain protein beta Propeller [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509352|gb|EFI33256.1| WD40 domain protein beta Propeller [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 444

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 148/325 (45%), Gaps = 24/325 (7%)

Query: 126 VEFRLWDVKDRKQIIGKKFF-----SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
           VE R ++V D++ I+G+ +        P   R+       ++ + +TG    F SR+ F 
Sbjct: 130 VEIRAFEVFDQRMILGRAYDLQDLDQVPLMLRRFCA----ELMEYLTGNGDFFRSRLAF- 184

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILRV 239
            E   +G     +  +   G ++  LT  R  I   P +SP+  ++A+    D+E  L +
Sbjct: 185 -ERKKNG--NKDIWSVTPQGNDLTRLTDLRG-ITLSPAWSPDGSRIAFTLMRDNEHHLGI 240

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           + ++   +      GN    +++P FS  G+ AL S+      DIY +D      E +  
Sbjct: 241 WDLEKGEEEVFSMPGN---TVISPAFSPEGRLAL-SLDPMGRPDIYWLDDDYGVDETIME 296

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              I++S S+    +++ F S R G   ++V        +R+S +   +  +P  SP+GD
Sbjct: 297 HWAIDVSPSFDASGTKMAFASGRLGNPHIFVHDFEKGQIQRVSYEGRYNT-NPSISPEGD 355

Query: 360 LIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +AFT+ + +   I V+  + G ++++     N + P ++P G  + FS  + G+   +L
Sbjct: 356 FVAFTRQTPDGHRIFVVDLETGREKQISSGPGNDEDPAFAPDGYFVAFSSNRSGEY--RL 413

Query: 419 YSIDLNGRNETLINT-PAYASDPQW 442
           Y    NG     I+T    A  P W
Sbjct: 414 YLTTRNGDEPREISTGEGNAKAPAW 438



 Score = 43.1 bits (100), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 1/98 (1%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S  G     + Q  +   I+ VDL++   +++++    +   +++PD   + F S+R
Sbjct: 348 PSISPEGDFVAFTRQTPDGHRIFVVDLETGREKQISSGPGNDEDPAFAPDGYFVAFSSNR 407

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            G+ +LY+   NG + + IS   E +   P W  + D 
Sbjct: 408 SGEYRLYLTTRNGDEPREIST-GEGNAKAPAWGLEKDF 444


>gi|299140155|ref|ZP_07033323.1| transcriptional regulator domain protein [Acidobacterium sp.
           MP5ACTX8]
 gi|298597884|gb|EFI54054.1| transcriptional regulator domain protein [Acidobacterium sp.
           MP5ACTX8]
          Length = 752

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/176 (32%), Positives = 87/176 (49%), Gaps = 10/176 (5%)

Query: 263 PRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           P  S  G R A I + ++ ++   S D      E+L  + FI+ +  YSPD S+I FESD
Sbjct: 452 PVVSPKGHRLAYIDLLRNGSLWRMSTDGHGK-QEQLIASRFIDSAPDYSPDGSEIAFESD 510

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R G  +++V +++G+  KR++     +   P WSP G L+AF      + AI V+   G 
Sbjct: 511 RTGASEIWVCKNDGTQCKRLTNIFGPNTSSPRWSPDGKLLAFNSGFHGRSAIFVVNASGG 570

Query: 382 QERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              LLV     +A     P WS  G+SL FS  + G    +++   +NG  E  I 
Sbjct: 571 IP-LLVTTGAFEAADNLIPNWSRDGQSLYFSSNRTGRF--EVWKTKVNGDEERQIT 623



 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 108/242 (44%), Gaps = 23/242 (9%)

Query: 217 PRFSPNQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA--L 273
           P FSPN   +AY+ + D    + +Y+     D   K     +S   +P +S  G+    L
Sbjct: 216 PTFSPNGNSLAYSWHSDAGQDQAIYMQKVDSDDREKLSDGGKS--FSPAWSPRGEEIAYL 273

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFIN---------ISASYSPDSSQIVFESDREG 324
            + +  + ++I    +Q   T R  +  FIN          + ++SPD S +V     + 
Sbjct: 274 RATEDPKWLEIEVAKVQRPHTAR--HLAFINNLKSAFHDVPTLNWSPDGSWLVTTEKEDA 331

Query: 325 KEQLY---VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDG 380
            E  +   V   NG  Q        +   + V+SPQGD IAF +  G   A I VM   G
Sbjct: 332 DESSHLELVSLENGEKQALTHPPALSVDVNAVFSPQGDWIAFVRARGPSSAEIHVMPAHG 391

Query: 381 SQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYAS 438
             +R+L  +  ++   TWS  G+SL+ +  +    G+ L+ + LNG     ++T PA+  
Sbjct: 392 GPDRVLPFNIHSINGLTWSADGQSLLVASSRALSVGN-LWKLSLNGDPPVALSTLPAHTE 450

Query: 439 DP 440
           DP
Sbjct: 451 DP 452



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 95/225 (42%), Gaps = 15/225 (6%)

Query: 216 EPRFSPNQQKVAYATYDDEDILR---VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +P  SP   ++AY      D+LR   ++ M T      +++   R +  AP +S +G   
Sbjct: 451 DPVVSPKGHRLAYI-----DLLRNGSLWRMSTDGHGKQEQLIASRFIDSAPDYSPDGSEI 505

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVM 331
                +  A +I+         +RLTN    N S+  +SPD   + F S   G+  ++V+
Sbjct: 506 AFESDRTGASEIWVCKNDGTQCKRLTNIFGPNTSSPRWSPDGKLLAFNSGFHGRSAIFVV 565

Query: 332 QSNGSDQKRISQD--KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            ++G     ++    + A    P WS  G  + F+     +F +   K +G +ER + + 
Sbjct: 566 NASGGIPLLVTTGAFEAADNLIPNWSRDGQSLYFSSNRTGRFEVWKTKVNGDEERQITQH 625

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                   S  G+SL + +  D  T   ++ I LNG     +  P
Sbjct: 626 GGYNGME-SADGKSLYYIQDTDKTT---IWRIPLNGGEAQPVAGP 666



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 23/171 (13%)

Query: 297 LTNTLFINISASYSPDSSQIVF--ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           LT+   +    ++SP+ + + +   SD    + +Y+ + +  D++++S   ++  F P W
Sbjct: 206 LTSVPGVYSWPTFSPNGNSLAYSWHSDAGQDQAIYMQKVDSDDREKLSDGGKS--FSPAW 263

Query: 355 SPQGDLIAFTKFSGEK--FAIGVMK-KDGSQERLLVEDSNLQA-----PT--WSPSGRSL 404
           SP+G+ IA+ + + +     I V K +     R L   +NL++     PT  WSP G  L
Sbjct: 264 SPRGEEIAYLRATEDPKWLEIEVAKVQRPHTARHLAFINNLKSAFHDVPTLNWSPDGSWL 323

Query: 405 IFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASD------PQ--WVGFM 446
           + + K+D D  S L  + L NG  + L + PA + D      PQ  W+ F+
Sbjct: 324 VTTEKEDADESSHLELVSLENGEKQALTHPPALSVDVNAVFSPQGDWIAFV 374


>gi|325982655|ref|YP_004295057.1| WD40-like beta Propeller containing protein [Nitrosomonas sp.
           AL212]
 gi|325532174|gb|ADZ26895.1| WD40-like beta Propeller containing protein [Nitrosomonas sp.
           AL212]
          Length = 368

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 27/185 (14%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE- 326
           +G++   S   DE  DIY  D        LTNTL  +  AS+SPD   I F S+R     
Sbjct: 133 SGEQRSYSWDYDEFYDIYETDFSGKNIRNLTNTLGYDAEASWSPDGKLIAFASNRRAYSD 192

Query: 327 ------------------QLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKF 366
                              +Y+M ++GS+ KR++  +    +D  P +SP G  I + +F
Sbjct: 193 ELSAEEAALFKVNPASMIDIYIMNADGSNVKRLTHTQS---YDGGPFFSPDGKRIVWRRF 249

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             SG +  I  M  DG+ ++ +   + +  AP + PSG+ +IF+    G    +LY +D+
Sbjct: 250 SESGREAEIFTMNIDGTDQKQITRLNVMSWAPFYHPSGKYIIFATNLHGHRNFELYIVDV 309

Query: 424 NGRNE 428
           +G+ E
Sbjct: 310 DGQKE 314



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 30/193 (15%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT----YDDE--------------DILR 238
           D  G NIR LT +      E  +SP+ + +A+A+    Y DE               ++ 
Sbjct: 153 DFSGKNIRNLTNTLGYDA-EASWSPDGKLIAFASNRRAYSDELSAEEAALFKVNPASMID 211

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---ISVQKDEAMDIYSVDLQSNATE 295
           +Y+M+       KR+ + +S    P FS +GKR +    S    EA +I+++++     +
Sbjct: 212 IYIMNADGSNV-KRLTHTQSYDGGPFFSPDGKRIVWRRFSESGREA-EIFTMNIDGTDQK 269

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFD-- 351
           ++T    ++ +  Y P    I+F ++  G    +LY++  +G  +     D E   FD  
Sbjct: 270 QITRLNVMSWAPFYHPSGKYIIFATNLHGHRNFELYIVDVDGQKEPVRVTDMEG--FDGL 327

Query: 352 PVWSPQGDLIAFT 364
           PV++P G+ I +T
Sbjct: 328 PVFTPDGNHITWT 340


>gi|118574578|sp|Q726K4|TOLB_DESVH RecName: Full=Protein tolB; Flags: Precursor
          Length = 442

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 173/401 (43%), Gaps = 26/401 (6%)

Query: 53  TKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ-----DSFKQKITNPD-SIPRFQDWNSL 106
           T    +  +G K++  ++++L       L+ Q      +  Q   +PD  + RFQ     
Sbjct: 52  TPGTPVSGMGVKLNGFINENLSFLPFLRLVDQRAILGGTVMQGYKSPDIDLKRFQ---LA 108

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQS 165
           GA ++VT    +       VE R+++    K + GK +          +A     D+ ++
Sbjct: 109 GADLVVTAGWPQGDASGSFVELRVYEALSGKLVFGKAYSHVEDGLLPNVADRFCSDLMKA 168

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +TG    F S + FV      G  K  + ++   G ++R +T    + L  P +SP+ + 
Sbjct: 169 LTGRGEFFKSTLAFVKHD---GKNKRDVWLVKPVGRDLRKITNLPGEAL-SPSWSPDGRF 224

Query: 226 VAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           V ++ +DD    L V+    R+ R  +RI    + ++ P F  + K A +S+      DI
Sbjct: 225 VVFSHFDDRSHALGVW---DRLTRQVQRIRFPGNTVIGPCFLPDNKVA-VSLSSGRNPDI 280

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + ++        L     IN+S S+    +++ F S R G  Q+++         RIS  
Sbjct: 281 FLLNHLFKKERELEANPSINVSPSFDATGTKMAFTSSRMGGPQVFMKDMTTGQVTRIS-- 338

Query: 345 KEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGR 402
           K  SY  +P  SP G L+AFTK +     I V       ER +       + P+++P   
Sbjct: 339 KTGSYNTEPSISPDGTLVAFTKMTDTGHRIFVYDMVTQSERQVSFGPGRDEQPSFAPDSY 398

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQW 442
            L F+  ++G    +++ +  +G +   + T P  AS  +W
Sbjct: 399 FLAFTSNRNG--AQQIFLVTRHGGDPKRVPTGPGDASFARW 437


>gi|114331371|ref|YP_747593.1| WD40 domain-containing protein [Nitrosomonas eutropha C91]
 gi|114308385|gb|ABI59628.1| WD40 domain protein beta Propeller [Nitrosomonas eutropha C91]
          Length = 369

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 97/207 (46%), Gaps = 35/207 (16%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ- 327
           G+R   +   DE  DIY  D +    + LTNT   +  AS+SPD   I F S+R    + 
Sbjct: 135 GQRRAYAWDYDEFYDIYEADFEGKNIKNLTNTKGYDAEASWSPDGKLIAFASNRRAYSEP 194

Query: 328 ------------------LYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS 367
                             +Y+M ++GS+ KR++     + +D  P +SP G  I + +FS
Sbjct: 195 LTEEETALFNNNPSSLIDIYIMDADGSNVKRLTH---TNRYDGGPFFSPDGKRIVWRRFS 251

Query: 368 --GEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             G++  I  M  DGS ++ L   + +  AP + PS + +IF+   +G    +LY +D++
Sbjct: 252 ENGQEAEIFTMNIDGSDQKQLTRLNKMSWAPFYHPSNQYIIFAANVEGHRNFELYVVDVD 311

Query: 425 GRNETLINT--------PAYASDPQWV 443
            + E +  T        P +  D Q++
Sbjct: 312 SKKEPVRVTEEEGFDGLPVFTPDGQYI 338



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 80/177 (45%), Gaps = 53/177 (29%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + +MD DG+N++ LT + ++    P FSP+ +++ +                        
Sbjct: 213 IYIMDADGSNVKRLTHT-NRYDGGPFFSPDGKRIVWR----------------------- 248

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                      RFS NG+ A          +I+++++  +  ++LT    ++ +  Y P 
Sbjct: 249 -----------RFSENGQEA----------EIFTMNIDGSDQKQLTRLNKMSWAPFYHPS 287

Query: 313 SSQIVFESDREGKE--QLYVMQSNGSDQK-RISQDKEASYFD--PVWSPQGDLIAFT 364
           +  I+F ++ EG    +LYV+  +   +  R+++++    FD  PV++P G  I +T
Sbjct: 288 NQYIIFAANVEGHRNFELYVVDVDSKKEPVRVTEEEG---FDGLPVFTPDGQYITWT 341


>gi|311235155|gb|ADP88009.1| Tol-Pal system beta propeller repeat protein TolB [Desulfovibrio
           vulgaris RCH1]
          Length = 445

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 173/401 (43%), Gaps = 26/401 (6%)

Query: 53  TKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ-----DSFKQKITNPD-SIPRFQDWNSL 106
           T    +  +G K++  ++++L       L+ Q      +  Q   +PD  + RFQ     
Sbjct: 55  TPGTPVSGMGVKLNGFINENLSFLPFLRLVDQRAILGGTVMQGYKSPDIDLKRFQ---LA 111

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQS 165
           GA ++VT    +       VE R+++    K + GK +          +A     D+ ++
Sbjct: 112 GADLVVTAGWPQGDASGSFVELRVYEALSGKLVFGKAYSHVEDGLLPNVADRFCSDLMKA 171

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +TG    F S + FV      G  K  + ++   G ++R +T    + L  P +SP+ + 
Sbjct: 172 LTGRGEFFKSTLAFVKHD---GKNKRDVWLVKPVGRDLRKITNLPGEAL-SPSWSPDGRF 227

Query: 226 VAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           V ++ +DD    L V+    R+ R  +RI    + ++ P F  + K A +S+      DI
Sbjct: 228 VVFSHFDDRSHALGVW---DRLTRQVQRIRFPGNTVIGPCFLPDNKVA-VSLSSGRNPDI 283

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + ++        L     IN+S S+    +++ F S R G  Q+++         RIS  
Sbjct: 284 FLLNHLFKKERELEANPSINVSPSFDATGTKMAFTSSRMGGPQVFMKDMTTGQVTRIS-- 341

Query: 345 KEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGR 402
           K  SY  +P  SP G L+AFTK +     I V       ER +       + P+++P   
Sbjct: 342 KTGSYNTEPSISPDGTLVAFTKMTDTGHRIFVYDMVTQSERQVSFGPGRDEQPSFAPDSY 401

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQW 442
            L F+  ++G    +++ +  +G +   + T P  AS  +W
Sbjct: 402 FLAFTSNRNG--AQQIFLVTRHGGDPKRVPTGPGDASFARW 440


>gi|317153133|ref|YP_004121181.1| WD40-like beta Propeller containing protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316943384|gb|ADU62435.1| WD40-like beta Propeller containing protein [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 440

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/320 (21%), Positives = 143/320 (44%), Gaps = 13/320 (4%)

Query: 126 VEFRLWDVKDRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           +E R+++    ++++GK +      +  + A        +++TG+KG F+S + FV +  
Sbjct: 125 LEARVFETFGGRRVVGKSYNDVGEITLAQAADRFCSAFLEALTGKKGFFDSPVAFVRQ-- 182

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G  K    V+ + G  ++ +T +       P +S +  K+ + T+       + + D+
Sbjct: 183 -DGKAKEIYTVLPQ-GRELKRIT-NLGGYNLSPSWSADGSKIIF-THIASTRHELGVYDS 238

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +  +           I++P F   G + ++++  + A DI  +D        L  + +I+
Sbjct: 239 KTQKITLYSQGLGQTIISPVFGP-GDKPIVALNVNGATDIQELDASFKPQRVLARSPYID 297

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S S+    +++ F S R G   +Y+M     + +R++   + +   P  SP G  IA+T
Sbjct: 298 VSPSFDRTGTKMAFTSGRAGNPHVYLMDMKSGEVRRVTMTGKYNT-HPCLSPDGRYIAYT 356

Query: 365 KFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +G    I +     G +++L     N + P + P G  + F+  + G  G KLY    
Sbjct: 357 NRTGSGHRIFLHDLATGREKQLTFGPGNDEYPAFDPDGYFVAFASNRSG--GFKLYLTTR 414

Query: 424 NGRNETLINT-PAYASDPQW 442
           +G    +I+T P  A  P W
Sbjct: 415 HGDTPRVISTGPGQAFAPAW 434


>gi|46581506|ref|YP_012314.1| tolB protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|46450928|gb|AAS97574.1| tolB protein, putative [Desulfovibrio vulgaris str. Hildenborough]
          Length = 456

 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 173/401 (43%), Gaps = 26/401 (6%)

Query: 53  TKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ-----DSFKQKITNPD-SIPRFQDWNSL 106
           T    +  +G K++  ++++L       L+ Q      +  Q   +PD  + RFQ     
Sbjct: 66  TPGTPVSGMGVKLNGFINENLSFLPFLRLVDQRAILGGTVMQGYKSPDIDLKRFQ---LA 122

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQS 165
           GA ++VT    +       VE R+++    K + GK +          +A     D+ ++
Sbjct: 123 GADLVVTAGWPQGDASGSFVELRVYEALSGKLVFGKAYSHVEDGLLPNVADRFCSDLMKA 182

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +TG    F S + FV      G  K  + ++   G ++R +T    + L  P +SP+ + 
Sbjct: 183 LTGRGEFFKSTLAFVKHD---GKNKRDVWLVKPVGRDLRKITNLPGEAL-SPSWSPDGRF 238

Query: 226 VAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           V ++ +DD    L V+    R+ R  +RI    + ++ P F  + K A +S+      DI
Sbjct: 239 VVFSHFDDRSHALGVW---DRLTRQVQRIRFPGNTVIGPCFLPDNKVA-VSLSSGRNPDI 294

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + ++        L     IN+S S+    +++ F S R G  Q+++         RIS  
Sbjct: 295 FLLNHLFKKERELEANPSINVSPSFDATGTKMAFTSSRMGGPQVFMKDMTTGQVTRIS-- 352

Query: 345 KEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGR 402
           K  SY  +P  SP G L+AFTK +     I V       ER +       + P+++P   
Sbjct: 353 KTGSYNTEPSISPDGTLVAFTKMTDTGHRIFVYDMVTQSERQVSFGPGRDEQPSFAPDSY 412

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQW 442
            L F+  ++G    +++ +  +G +   + T P  AS  +W
Sbjct: 413 FLAFTSNRNG--AQQIFLVTRHGGDPKRVPTGPGDASFARW 451


>gi|269837976|ref|YP_003320204.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269787239|gb|ACZ39382.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 663

 Score = 75.5 bits (184), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 101/244 (41%), Gaps = 61/244 (25%)

Query: 263 PRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P+ + +G+R    V       K     I+ V+   +   R T     + S  +SPD S++
Sbjct: 19  PQIAPDGRRVAYVVTEIDLEGKRYRSAIWVVNADGSGRTRFTAGTHKDTSPRWSPDGSRL 78

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------------ 364
            F SDR+G  QLYVM S+G + +RI+ D +    DPVWSP G  +AF             
Sbjct: 79  AFLSDRDGVTQLYVMPSDGGEPERIT-DLKHGVADPVWSPDGAWLAFVSKVGPEGPVQRA 137

Query: 365 ------------------------KFSGEKF------AIGVMKKDGSQERLLVE-DSNLQ 393
                                   K  GE F       I ++   G   R + + D +  
Sbjct: 138 DETEEDRKRAAQRSDTKVIRSLKYKLDGEGFFDDRRRHIFIVPATGGTPRQITDGDWDDT 197

Query: 394 APTWSPSGRSLIFSRKKDGD----TGSKLYSIDLNG-------RNETLINTPAYASDPQW 442
            P WSP GR++ F   +  D    T S ++   L+G        ++ + N+PA++ D  W
Sbjct: 198 QPAWSPDGRAIAFVSNRTDDRERNTFSDIWIAPLDGGEPRRITPSDGVYNSPAFSPDGDW 257

Query: 443 VGFM 446
           + ++
Sbjct: 258 IAYV 261


>gi|120601328|ref|YP_965728.1| WD40 domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|120561557|gb|ABM27301.1| WD40 domain protein beta Propeller [Desulfovibrio vulgaris DP4]
          Length = 463

 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 95/401 (23%), Positives = 173/401 (43%), Gaps = 26/401 (6%)

Query: 53  TKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ-----DSFKQKITNPD-SIPRFQDWNSL 106
           T    +  +G K++  ++++L       L+ Q      +  Q   +PD  + RFQ     
Sbjct: 73  TPGTPVSGMGVKLNGFINENLSFLPFLRLVDQRAILGGTVMQGYKSPDIDLKRFQ---LA 129

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQS 165
           GA ++VT    +       VE R+++    K + GK +          +A     D+ ++
Sbjct: 130 GADLVVTAGWPQGDASGSFVELRVYEALSGKLVFGKAYSHVEDGLLPNVADRFCSDLMKA 189

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +TG    F S + FV      G  K  + ++   G ++R +T    + L  P +SP+ + 
Sbjct: 190 LTGRGEFFKSTLAFVKHD---GKNKRDVWLVKPVGRDLRKITNLPGEAL-SPSWSPDGRF 245

Query: 226 VAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           V ++ +DD    L V+    R+ R  +RI    + ++ P F  + K A +S+      DI
Sbjct: 246 VVFSHFDDRSHALGVW---DRLTRQVQRIRFPGNTVIGPCFLPDNKVA-VSLSSGRNPDI 301

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + ++        L     IN+S S+    +++ F S R G  Q+++         RIS  
Sbjct: 302 FLLNHLFKKERELEANPSINVSPSFDATGTKMAFTSSRMGGPQVFMKDMTTGQVTRIS-- 359

Query: 345 KEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGR 402
           K  SY  +P  SP G L+AFTK +     I V       ER +       + P+++P   
Sbjct: 360 KTGSYNTEPSISPDGTLVAFTKMTDTGHRIFVYDMVTQSERQVSFGPGRDEQPSFAPDSY 419

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQW 442
            L F+  ++G    +++ +  +G +   + T P  AS  +W
Sbjct: 420 FLAFTSNRNG--AQQIFLVTRHGGDPKRVPTGPGDASFARW 458


>gi|226228060|ref|YP_002762166.1| hypothetical protein GAU_2654 [Gemmatimonas aurantiaca T-27]
 gi|226091251|dbj|BAH39696.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 338

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 115/275 (41%), Gaps = 28/275 (10%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-------YDDEDILRV 239
           G+    L V   D   +  L   RD     P  S + Q+V Y         YD +D+  V
Sbjct: 72  GVPSLRLMVYHTDSGTVAPLF-GRDIAGGSPSVSADGQRVVYVGESNSTVDYDFQDLWVV 130

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM---DIYSVDLQSNATER 296
                    AP+R+        AP  S NG  ALI+  +  AM    IY  D++  A   
Sbjct: 131 MR-----GAAPRRLALSDGSEHAPSMSPNG--ALIAYARPNAMMLSHIYVADIEGRAESP 183

Query: 297 LTNTL-----FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           L+  +     +   + ++SPD ++++F     G   LY M+ +G+  ++I+ +   S FD
Sbjct: 184 LSLAMAPGLQYTFATPAWSPDGTRLLFAGGAPGMLHLYTMRVDGTQVQQIT-NATYSDFD 242

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             WSP G  IAF ++      I +M ++     ER     +  + P WSP G  + F   
Sbjct: 243 GTWSPDGQTIAFVRYISPNHQI-LMTRNLVTGAERTFEYANRSRHPAWSPDGTRIAFVSN 301

Query: 410 KDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWV 443
              +   +LY++  +G   T L N       P W+
Sbjct: 302 MSDNADLELYTVKPDGSALTRLTNDNLTQQHPSWI 336


>gi|256823743|ref|YP_003147706.1| WD40 domain-containing protein beta Propeller [Kangiella koreensis
           DSM 16069]
 gi|256797282|gb|ACV27938.1| WD40 domain protein beta Propeller [Kangiella koreensis DSM 16069]
          Length = 1068

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 92/182 (50%), Gaps = 27/182 (14%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +       +TN++  ++   +SP+  Q+ F +D+ G + ++VM S+GSDQ +++
Sbjct: 72  DIYTMPMSGGKATNITNSMAWDMQPRFSPNGQQLAFTTDQGGGDNIWVMDSDGSDQYQVT 131

Query: 343 QDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGV------MKKDGSQERL---LVEDSNL 392
           ++      +PVWSP G+ IA  K F+G + ++G        K  GS  +L     E  +L
Sbjct: 132 KESFRLLNNPVWSPDGNYIAARKHFTGTR-SLGAGEIWLYHKSGGSGVQLNKRPNEQKDL 190

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKL-YSIDLN-------------GRNETLINTPAYAS 438
             P ++P G+ ++FSR  D   GS   YS D N             G  ET I+ P  A 
Sbjct: 191 GEPAFTPDGKYVLFSR--DSTPGSYFEYSKDSNEQIYEVFAINRETGDIETWIDGPGGAV 248

Query: 439 DP 440
            P
Sbjct: 249 RP 250


>gi|260061950|ref|YP_003195030.1| hypothetical protein RB2501_10125 [Robiginitalea biformata
           HTCC2501]
 gi|257796359|gb|EAR17253.2| hypothetical protein RB2501_10125 [Robiginitalea biformata
           HTCC2501]
          Length = 486

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 18/208 (8%)

Query: 221 PNQQKVAYATY--DDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQ 277
           P+  ++A + +  DD  +  +Y +       P+++ G          +S++G+  L +  
Sbjct: 280 PDGSRIAISHHNPDDGGVSSIYHLPIEGSDHPEKVTGEGLGASYLHGWSADGQTMLFTGN 339

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           ++   DIY+VD+ S    +LTN   ++  + YSPD   I F S+R G  Q++ M+ +GS+
Sbjct: 340 RNGQYDIYAVDVASGKETQLTNQETLDDGSEYSPDGQWIYFNSNRTGTMQIWRMRPDGSE 399

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKF-----SGE-----KFAIGVMKKDGSQERLLV 387
           Q +++ D+   +F P  SP G  +    F     SG+        + +M  +G Q   + 
Sbjct: 400 QTQLTHDRFNDWF-PHVSPDGKQVVMISFPTSVPSGDHPFYKHCMLRIMPYEGGQPVAIA 458

Query: 388 ----EDSNLQAPTWSPSGRSLIFSRKKD 411
                   +  P+WSP  R + F    D
Sbjct: 459 YVYGGQGTINVPSWSPDSRYIAFVTNSD 486


>gi|30248906|ref|NP_840976.1| periplasmic component of the Tol biopolymer transport system
           [Nitrosomonas europaea ATCC 19718]
 gi|30138523|emb|CAD84813.1| Periplasmic component of the Tol biopolymer transport system
           [Nitrosomonas europaea ATCC 19718]
          Length = 369

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 95/207 (45%), Gaps = 33/207 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+R   +   DE  DIY  D        LT+T   +  AS+SPD   I F S+R    +
Sbjct: 134 SGQRRSYAWDYDEFYDIYETDFAGGNIRNLTHTKGYDAEASWSPDGRLIAFASNRRAYSE 193

Query: 328 -------------------LYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFS 367
                              +Y+M ++GS+ KR++     SY   P +SP G  I + +FS
Sbjct: 194 PLSEAETVLFSNDPSSMIDIYIMDADGSNVKRLTHTN--SYDGGPFFSPDGKRIVWRRFS 251

Query: 368 --GEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             G++  I  M  DGS ++ +   + +  AP + PS + +IF+    G    +LY +D++
Sbjct: 252 ENGQEAEIFTMNTDGSDQKQITRLNKMSWAPFYHPSNQYIIFATNVHGHRNFELYIVDID 311

Query: 425 GRNETLINT--------PAYASDPQWV 443
           G+ E +  T        P +  D Q++
Sbjct: 312 GKKEPVRVTDEEGFDGLPVFTPDGQYI 338



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 7/159 (4%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREG 324
           S  +  L S      +DIY +D   +  +RLT+T   +    +SPD  +IV+   S+   
Sbjct: 196 SEAETVLFSNDPSSMIDIYIMDADGSNVKRLTHTNSYDGGPFFSPDGKRIVWRRFSENGQ 255

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEK-FAIGVMKKDGSQ 382
           + +++ M ++GSDQK+I++  + S+  P + P    I F T   G + F + ++  DG +
Sbjct: 256 EAEIFTMNTDGSDQKQITRLNKMSW-APFYHPSNQYIIFATNVHGHRNFELYIVDIDGKK 314

Query: 383 ERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           E + V D       P ++P G+ + ++  +  D   +L+
Sbjct: 315 EPVRVTDEEGFDGLPVFTPDGQYITWTSDRTPDHKGRLF 353


>gi|325293040|ref|YP_004278904.1| tolB protein [Agrobacterium sp. H13-3]
 gi|325060893|gb|ADY64584.1| tolB protein [Agrobacterium sp. H13-3]
          Length = 276

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 13/156 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GK       +D+  DIYS+D+ S    RLT+    N    YSPD   I F S R G
Sbjct: 117 WSPDGKGFAYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGEWIYFNSSRTG 176

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVM 376
           + Q++ ++ +GS  +RI+      +F P  SP GD + F  +  + F         + +M
Sbjct: 177 QMQIWRVRVDGSAVERITDSAYGDWF-PHPSPSGDKVVFVSYDADVFDHPRDLNVRVRLM 235

Query: 377 KKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
             DG     L +       + +P WSP G    + R
Sbjct: 236 DMDGGNAETLFDLFGGQGTMNSPNWSPDGDEFAYVR 271



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 39/188 (20%), Positives = 86/188 (45%), Gaps = 16/188 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K+++ ++   G   R +T  ++   +   +SP+ +  AY    D+ +  +Y MD  ID  
Sbjct: 90  KSAIYLLPSTGGTPRLMT--KNLPSYWHGWSPDGKGFAYCGIRDQ-VFDIYSMD--IDSG 144

Query: 250 PK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            + R+ +       P +S +G+    +  +   M I+ V +  +A ER+T++ + +    
Sbjct: 145 VETRLTHGEGRNDGPDYSPDGEWIYFNSSRTGQMQIWRVRVDGSAVERITDSAYGDWFPH 204

Query: 309 YSPDSSQI--------VFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQG 358
            SP   ++        VF+  R+   ++ +M  +G + + +      + +   P WSP G
Sbjct: 205 PSPSGDKVVFVSYDADVFDHPRDLNVRVRLMDMDGGNAETLFDLFGGQGTMNSPNWSPDG 264

Query: 359 DLIAFTKF 366
           D  A+ ++
Sbjct: 265 DEFAYVRY 272


>gi|167470904|ref|ZP_02335608.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           FV-1]
          Length = 225

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 7/205 (3%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K++       ++  +V  DL+ S  FN I      Q
Sbjct: 19  LHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEEIGAIVGADLRNSGKFNPIDAARMPQ 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           + +    +     W +LG   +V G+V         V ++L D       I+ +  +   
Sbjct: 79  QPSTAAEVTP-AAWTALGIDAVVVGQVQPSADGSYVVSYQLVDTSGSAGSILAQNQYKVT 137

Query: 149 ASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             W R  AHT+SD++++ +TG KG F +RI +V ++   G   + L V D DG N +++ 
Sbjct: 138 KQWLRYSAHTVSDEVFEKLTGIKGAFRTRIAYVVKT-NGGKFPHELRVSDYDGYN-QFVV 195

Query: 208 PSRDQILFEPRFSPNQQKVAYATYD 232
               + L  P +SP+  K+AY T++
Sbjct: 196 HRSPEPLMSPAWSPDGSKIAYVTFE 220


>gi|159184859|ref|NP_354645.2| tolB protein [Agrobacterium tumefaciens str. C58]
 gi|159140140|gb|AAK87430.2| tolB protein [Agrobacterium tumefaciens str. C58]
          Length = 276

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 13/156 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GK       +D+  DIYS+D+ S    RLT+    N    YSPD   I F S R G
Sbjct: 117 WSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTG 176

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVM 376
           + Q++ ++ +GS  +RI+      +F P  SP GD + F  +  + F         + +M
Sbjct: 177 QMQIWRVRVDGSSVERITDSAYGDWF-PHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM 235

Query: 377 KKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
             DG     L +       + +P WSP G    + R
Sbjct: 236 DMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVR 271



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 13/181 (7%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVF 318
           AP +S +GK  L++    E + +Y + L  + +    +T F  I       SPD +    
Sbjct: 27  APNWSPDGKYLLLN---SEGL-LYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAI 82

Query: 319 ESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
               E GK  +Y++ S G   + ++++  + +    WSP G    +     + F I  M 
Sbjct: 83  SDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHG--WSPDGKSFTYCGIRDQVFDIYSMD 140

Query: 378 KD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            D G + RL   +     P +SP GR + F+  + G    +++ + ++G +   I   AY
Sbjct: 141 IDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQM--QIWRVRVDGSSVERITDSAY 198

Query: 437 A 437
            
Sbjct: 199 G 199



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 37/188 (19%), Positives = 85/188 (45%), Gaps = 16/188 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K+++ ++   G   R +T  ++   +   +SP+ +   Y    D+ +  +Y MD  ID  
Sbjct: 90  KSAIYLLPSTGGTPRLMT--KNLPSYWHGWSPDGKSFTYCGIRDQ-VFDIYSMD--IDSG 144

Query: 250 PK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            + R+ +       P +S +G+    +  +   M I+ V +  ++ ER+T++ + +    
Sbjct: 145 VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPH 204

Query: 309 YSPDSSQI--------VFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQG 358
            SP   ++        VF+  R+   ++ +M  +G + + +      + +   P WSP G
Sbjct: 205 PSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDG 264

Query: 359 DLIAFTKF 366
           D  A+ ++
Sbjct: 265 DEFAYVRY 272


>gi|227822240|ref|YP_002826211.1| putative TolB-like protein [Sinorhizobium fredii NGR234]
 gi|227341240|gb|ACP25458.1| putative TolB-like protein [Sinorhizobium fredii NGR234]
          Length = 275

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 17/183 (9%)

Query: 239 VYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +YL+ +    AP+ + GN  S      +S +G+       +D+  DIY++ +      RL
Sbjct: 92  IYLLPSE-GGAPRLVTGNLPSYWHG--WSPDGRMLTYCGIRDQVFDIYTISVDGGEERRL 148

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T+    N    +SPD + I F S R G+ Q++ ++ +GSD +RI+      +F P  SP 
Sbjct: 149 THGEGRNDGPDWSPDGAWIYFNSSRTGRMQIWRVRPDGSDVQRITDSPYGDWF-PHPSPD 207

Query: 358 GDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLI 405
           G  +    + G+ F         + +M  +G   R+L E       +  P WSP+G +  
Sbjct: 208 GRHLLVLSYDGDVFDHPRDLDVRLRLMDPEGGNARVLFELFGGQGTMNVPNWSPNGDAFA 267

Query: 406 FSR 408
           F R
Sbjct: 268 FVR 270



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 12/159 (7%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQ 315
           ++ AP +S +GK   + +  D  +    VD    A     +T F    N     SPD + 
Sbjct: 24  LVEAPNWSPDGK--FLIINGDGRLYRLGVD---GAEPTEIDTGFAGQCNNDHGISPDGNT 78

Query: 316 IVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +      E GK  +Y++ S G   + ++ +  + +    WSP G ++ +     + F I 
Sbjct: 79  LAISDKTEFGKSAIYLLPSEGGAPRLVTGNLPSYWHG--WSPDGRMLTYCGIRDQVFDIY 136

Query: 375 VMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDG 412
            +  DG +ER L   +     P WSP G  + F+  + G
Sbjct: 137 TISVDGGEERRLTHGEGRNDGPDWSPDGAWIYFNSSRTG 175


>gi|32699925|sp|Q8UEU8|Y1656_AGRT5 RecName: Full=Uncharacterized protein Atu1656
          Length = 293

 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 13/156 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GK       +D+  DIYS+D+ S    RLT+    N    YSPD   I F S R G
Sbjct: 134 WSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTG 193

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVM 376
           + Q++ ++ +GS  +RI+      +F P  SP GD + F  +  + F         + +M
Sbjct: 194 QMQIWRVRVDGSSVERITDSAYGDWF-PHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM 252

Query: 377 KKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
             DG     L +       + +P WSP G    + R
Sbjct: 253 DMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVR 288



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 13/181 (7%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVF 318
           AP +S +GK  L++    E + +Y + L  + +    +T F  I       SPD +    
Sbjct: 44  APNWSPDGKYLLLN---SEGL-LYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAI 99

Query: 319 ESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
               E GK  +Y++ S G   + ++++  + +    WSP G    +     + F I  M 
Sbjct: 100 SDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHG--WSPDGKSFTYCGIRDQVFDIYSMD 157

Query: 378 KD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            D G + RL   +     P +SP GR + F+  + G    +++ + ++G +   I   AY
Sbjct: 158 IDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQM--QIWRVRVDGSSVERITDSAY 215

Query: 437 A 437
            
Sbjct: 216 G 216



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 37/188 (19%), Positives = 85/188 (45%), Gaps = 16/188 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K+++ ++   G   R +T  ++   +   +SP+ +   Y    D+ +  +Y MD  ID  
Sbjct: 107 KSAIYLLPSTGGTPRLMT--KNLPSYWHGWSPDGKSFTYCGIRDQ-VFDIYSMD--IDSG 161

Query: 250 PK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            + R+ +       P +S +G+    +  +   M I+ V +  ++ ER+T++ + +    
Sbjct: 162 VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPH 221

Query: 309 YSPDSSQI--------VFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQG 358
            SP   ++        VF+  R+   ++ +M  +G + + +      + +   P WSP G
Sbjct: 222 PSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDG 281

Query: 359 DLIAFTKF 366
           D  A+ ++
Sbjct: 282 DEFAYVRY 289


>gi|283850886|ref|ZP_06368172.1| WD40 domain protein beta Propeller [Desulfovibrio sp. FW1012B]
 gi|283573809|gb|EFC21783.1| WD40 domain protein beta Propeller [Desulfovibrio sp. FW1012B]
          Length = 442

 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 87/384 (22%), Positives = 161/384 (41%), Gaps = 17/384 (4%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP-RFQDWNSLGAQVLVTGRVIKEGKD 122
           K+ ++++KDLQ      L+   +   ++    +    F+ ++     VLVT      G +
Sbjct: 66  KLQDLINKDLQFLPFLQLVPPSNIPGQLGGAKAEQIDFKPFSLAKVDVLVTAN-WTPGTN 124

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
              VE R ++V  +K ++GK +   + A    IA     ++  ++TG+ G FNS+I FV 
Sbjct: 125 LGNVELRAFEVYSQKVLVGKGYDGVTDAQLPDIADRFCMELMAALTGQGGFFNSQIAFVK 184

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S   G    ++  M R    +  +T   D  +   P +S + +++ +           Y
Sbjct: 185 PSSGKGTDIWTVRPMGR---GLTRVTSYNDLGMAVSPAWSFDGRRIVFTLIGSRSH---Y 238

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L        P+      + +++PRF  +G+ A +S+      DIY +         + + 
Sbjct: 239 LGVWSGGGKPQVYTLPTTNVVSPRFLPDGQIA-VSLSLRGKADIYLLTGGQQPGRAIASG 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I++S S+      + + SD  G   +YV    G   +RI+     +  +P  SP G L
Sbjct: 298 PGIDVSPSFDASGRTMAYVSDETGSPNIYVKDVGGGSGRRITSSGYNT--NPSISPDGKL 355

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +AFTK  G    + V      QE  +       + P+++P G  + F+  + G    K+Y
Sbjct: 356 VAFTKQMGGAQKVFVHDLGTGQETQVTSGGGSDENPSFAPDGYFIAFASTRSGQ--KKIY 413

Query: 420 SIDLNGRNETLINTP-AYASDPQW 442
               +G    ++ T    A  P W
Sbjct: 414 VTTRHGAPPVMVPTGDGPAQMPSW 437



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 1/94 (1%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +GK    + Q   A  ++  DL +    ++T+    + + S++PD   I F S R
Sbjct: 347 PSISPDGKLVAFTKQMGGAQKVFVHDLGTGQETQVTSGGGSDENPSFAPDGYFIAFASTR 406

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            G++++YV   +G+    +      +   P W P
Sbjct: 407 SGQKKIYVTTRHGAPPVMVPTGDGPAQM-PSWGP 439


>gi|116621073|ref|YP_823229.1| amidohydrolase [Candidatus Solibacter usitatus Ellin6076]
 gi|116224235|gb|ABJ82944.1| amidohydrolase [Candidatus Solibacter usitatus Ellin6076]
          Length = 1046

 Score = 73.2 bits (178), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 90/189 (47%), Gaps = 22/189 (11%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMD-IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           ILAP  S +GKR +      EA++ ++ +++   AT  LTN  +   +  +SPD  +I +
Sbjct: 365 ILAPALSPDGKRIVF-----EALNQLWLMEIGGEATP-LTNDGYYKQTPVWSPDGKRIAY 418

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD+ G   +Y++      +KR++   EA+  DPVWSP G  IAF    G    I  +  
Sbjct: 419 SSDKNGTANVYILDLATQAEKRVTNLHEAAALDPVWSPDGTQIAFQTQEG-TVHIADLAS 477

Query: 379 DGSQE--RLLVEDSNLQAPTWSPSGRSLIFS-------RKKDGDTGSKLYSIDLNGRNET 429
            GS+E  R   E      P+WS +G+ L  +       R ++G   S + + DL    + 
Sbjct: 478 GGSREVIRTTFEPGR---PSWSKNGKVLSLAVLRAYTKRYREGT--SLILTADLQSGKQV 532

Query: 430 LINTPAYAS 438
           L     Y S
Sbjct: 533 LTEPAPYKS 541



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 71/142 (50%), Gaps = 9/142 (6%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIA 362
           N+ A+ SPD   I+ +     +  L+ +   G   +R+++ + EAS   P +SP G LIA
Sbjct: 87  NLGATVSPDRKTIILDL----QTALWALPFEGGAARRLTEPELEAS--RPDFSPTGSLIA 140

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           F  FSG  F I VMK DGS  R L E   + + P  SP G  + FS  +       ++++
Sbjct: 141 FQSFSGGTFHIWVMKPDGSGRRELTEGHGDDRDPRVSPDGARIAFSSDRAMKGNYDIWTV 200

Query: 422 DL-NGRNETLINTPAYASDPQW 442
           ++  G+     + P+   +P W
Sbjct: 201 EVATGKLAQWTSDPSDEYEPAW 222



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 310 SPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SPD ++I F SDR  +G   ++ ++       + + D    Y +P WSP G  IA+   +
Sbjct: 177 SPDGARIAFSSDRAMKGNYDIWTVEVATGKLAQWTSDPSDEY-EPAWSPDGMEIAYVSGA 235

Query: 368 GEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIF 406
           G      +  K G Q R+++E    S + AP+WSP G+ + +
Sbjct: 236 GAIGHAVLAAKAGGQPRVIIEAPDGSKVNAPSWSPDGKQIAY 277



 Score = 43.9 bits (102), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 21/206 (10%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           ++ +L  +  +G   R LT    +    P FSP    +A+ ++       +++M  + D 
Sbjct: 103 LQTALWALPFEGGAARRLTEPELEA-SRPDFSPTGSLIAFQSFSG-GTFHIWVM--KPDG 158

Query: 249 APKR-----IGNFRSMILAPRFSSNGKRALISVQKDEAM----DIYSVDLQSNATERLTN 299
           + +R      G+ R     PR S +G R  I+   D AM    DI++V++ +    + T+
Sbjct: 159 SGRRELTEGHGDDRD----PRVSPDGAR--IAFSSDRAMKGNYDIWTVEVATGKLAQWTS 212

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQG 358
                   ++SPD  +I + S         +    G   + I +  + S  + P WSP G
Sbjct: 213 DPSDEYEPAWSPDGMEIAYVSGAGAIGHAVLAAKAGGQPRVIIEAPDGSKVNAPSWSPDG 272

Query: 359 DLIAFTKFSGEKFAIGVMKKD-GSQE 383
             IA+ + +  K  + +  K  GS E
Sbjct: 273 KQIAYVQTTANKLRLLISGKQVGSAE 298



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 61/305 (20%), Positives = 116/305 (38%), Gaps = 82/305 (26%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P   + +  P  SP+ +++ +     E + +++LM+   +  P  + N       P +S 
Sbjct: 359 PRTAKGILAPALSPDGKRIVF-----EALNQLWLMEIGGEATP--LTNDGYYKQTPVWSP 411

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKE 326
           +GKR   S  K+   ++Y +DL + A +R+TN      +   +SPD +QI F++ +EG  
Sbjct: 412 DGKRIAYSSDKNGTANVYILDLATQAEKRVTNLHEAAALDPVWSPDGTQIAFQT-QEGTV 470

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDP---VWSPQGDLI------AFTKFSGEKFAIGVMK 377
            +  + S G      S++   + F+P    WS  G ++      A+TK   E  ++ +  
Sbjct: 471 HIADLASGG------SREVIRTTFEPGRPSWSKNGKVLSLAVLRAYTKRYREGTSLILTA 524

Query: 378 KDGSQERLLVE-------------------------------------DSN--------- 391
              S +++L E                                     D+N         
Sbjct: 525 DLQSGKQVLTEPAPYKSITTRSIDGPIYSPDGTRMAYVMDDYLWVRPVDANGLPVSEARP 584

Query: 392 -----LQAPTWSPSGRSLIFSR-------KKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                  AP+WS  G+ +++         + DG T      ++L  R +    T    + 
Sbjct: 585 INEEMTDAPSWSADGKRMLYLSAGTLRMIEADGKTPPVTVPVNLTWRRQERTKTIVVHAG 644

Query: 440 PQWVG 444
             W G
Sbjct: 645 TLWDG 649


>gi|323698025|ref|ZP_08109937.1| WD40 domain protein beta propeller [Desulfovibrio sp. ND132]
 gi|323457957|gb|EGB13822.1| WD40 domain protein beta propeller [Desulfovibrio desulfuricans
           ND132]
          Length = 435

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 97/452 (21%), Positives = 183/452 (40%), Gaps = 36/452 (7%)

Query: 9   EELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID-----ELGG 63
           + + + I  CLL+ L   F   S    + V  +      V+I       +D     E   
Sbjct: 2   KRITILIAACLLVCLAAAF--ASAQGPLTVDIHGPGQRMVNIVLLPPKGLDGQPVPEAAA 59

Query: 64  KV-SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
           K   E+V+ DL       L+   +      +P      QD +    Q+      +  G +
Sbjct: 60  KAFEELVANDLGYIPFLKLVPVTTLLGG--DPSRGVTAQDIDFKPLQLARVDLCLTTGWN 117

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
              +E R+++    ++++GK +         +A        +++TG+KG F+S I FV +
Sbjct: 118 GQYLEARVYETFGGRRVVGKAYRDVADKLPMVADRFCSAFLEALTGKKGFFDSPIAFVKQ 177

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF--EPRFSPNQQKVAYATY-DDEDILRV 239
               G  K    V+ +     R LT   D   F   P +S     +A+    +D   L +
Sbjct: 178 ---DGKAKEIYTVLPQG----RGLTQISDLGGFNLSPAWSAEGDLIAFTHIGNDRHELCI 230

Query: 240 YLMDT-RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           Y   T +I R  K +G+    +++P +   G     S+  +   +IY +       +RL 
Sbjct: 231 YEAKTHKIRRIAKGLGD---TVISPVYGP-GDVLYASLNLNGTTNIYELSKSYKVGKRLG 286

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            + +I++S S+    S++ F S R G   +Y++       +R++   + +   P  SP G
Sbjct: 287 ASPYIDVSPSFDRTGSKMAFTSGRAGNPHIYLLDMQSGQVRRVTTTGKYNT-HPCLSPDG 345

Query: 359 DLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             +A+T  + +   I +   + G +++L     N + P + P G  + F+  + G    +
Sbjct: 346 RYVAYTHQTSDGHRIFLHDLETGREKQLTFGPGNDEYPAFGPDGYFIAFASSRTG--AYQ 403

Query: 418 LYSIDLNGRNETLINT-------PAYASDPQW 442
           LY    +G     I+T       PA+ +  QW
Sbjct: 404 LYLTTRHGDTPRRISTGKGAAFAPAWDTSLQW 435


>gi|171057547|ref|YP_001789896.1| periplasmic component of the Tol biopolymer transport system
           [Leptothrix cholodnii SP-6]
 gi|170774992|gb|ACB33131.1| periplasmic component of the Tol biopolymer transport system
           [Leptothrix cholodnii SP-6]
          Length = 296

 Score = 72.8 bits (177), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 19/204 (9%)

Query: 219 FSPNQQKVAYATYDDEDIL-RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            SP+  ++A + +  ED+  R+Y++       P R+ +     L   +S +G+R     +
Sbjct: 90  LSPDGARLAISHFAHEDVSSRIYIVPLG-GGVPVRVTDLGPNYLH-GWSPDGQRLAYCAE 147

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D   D+Y++ +      RLT+T  ++    YSPD   I F S R G  Q++ M  +G +
Sbjct: 148 RDGQYDVYTIPVHGGPETRLTDTPGLDDGPEYSPDGRHIWFNSTRSGLMQVWRMDIHGRN 207

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-----------VMKKDGSQERLL 386
           Q  + +D    +F P  SP G  + +  +  +  A G           ++  +G + R +
Sbjct: 208 QTHVIKDDANCWF-PHVSPDGQRVVYVAYDKDNVAPGDHPPDKPVEIRLVSAEGGKPRTI 266

Query: 387 VE----DSNLQAPTWSPSGRSLIF 406
            +       L   +W+P  R + F
Sbjct: 267 AQLFGGQGTLNVNSWAPDNRHIAF 290



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/181 (20%), Positives = 85/181 (46%), Gaps = 13/181 (7%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY--SPDS 313
           F  +I AP ++ +G+R +     +    +++ +L S    R+     ++ +  +  SPD 
Sbjct: 39  FDVVIEAPNWTRDGRRLIF----NSLGGMFAYELSSGEVTRIDTGFAVDCNNDHVLSPDG 94

Query: 314 SQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +++     +  +   ++Y++   G    R++ D   +Y    WSP G  +A+      ++
Sbjct: 95  ARLAISHFAHEDVSSRIYIVPLGGGVPVRVT-DLGPNYLH-GWSPDGQRLAYCAERDGQY 152

Query: 372 AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +  +   G  E  L +   L   P +SP GR + F+  + G    +++ +D++GRN+T 
Sbjct: 153 DVYTIPVHGGPETRLTDTPGLDDGPEYSPDGRHIWFNSTRSGLM--QVWRMDIHGRNQTH 210

Query: 431 I 431
           +
Sbjct: 211 V 211


>gi|108763053|ref|YP_628620.1| beta-propeller repeat-containing to-pal system protein TolB
           [Myxococcus xanthus DK 1622]
 gi|108466933|gb|ABF92118.1| tol-pal system beta propeller repeat protein TolB [Myxococcus
           xanthus DK 1622]
          Length = 366

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/312 (22%), Positives = 131/312 (41%), Gaps = 19/312 (6%)

Query: 144 FFSSPASWRKIAHTISDDIYQSIT-GEKGDF-------NSRILFVSESVVSGIIKNSLCV 195
           F S  A  + +     D +   +T GE+ ++          +L ++ +   G+ +  + V
Sbjct: 55  FLSERAGQKDVWKVSPDGVETQLTRGEEDEYPGPLSPDGKSLLVITATEEGGLHRQQMRV 114

Query: 196 MDRDGANIRY-LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +  DG +    L P R +      ++P+   +  A  D E    V  ++ R      R+ 
Sbjct: 115 LPLDGKSPAVPLHPPRARAR-NASWAPDGTWLV-AESDAEGFSDVVRLEPREGGPEVRLT 172

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                   P  S +GK       ++   ++Y  +   +   RLT     + +  +SPD  
Sbjct: 173 QVPQGCFEPAVSPDGKEVAFVCSREGDPEVYVANADGSGERRLTFFHHEDRTPKWSPDGK 232

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGD-LIAFTKFSGEKFA 372
            +V  SDRE K++LY ++ +GSD + +S +  E    +  WSP G  L+  ++       
Sbjct: 233 WLVIVSDRERKDRLYFLRPDGSDLRAVSGESFEGDEREAAWSPDGQRLVYVSRLPDGNAR 292

Query: 373 IGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           I ++   G     L +  +    P WSP G+ L F  ++ GDT   +Y +  +G  +T +
Sbjct: 293 IWMVAVAGGAPVALTDGKHRDDMPAWSPDGKYLAFVSERQGDT--DVYVMRADGSGQTRL 350

Query: 432 NTPAYASDPQWV 443
            T   A  P W+
Sbjct: 351 TT---AKGPDWL 359


>gi|332665861|ref|YP_004448649.1| hypothetical protein Halhy_3928 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332334675|gb|AEE51776.1| hypothetical protein Halhy_3928 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 527

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 78/156 (50%), Gaps = 15/156 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GK+ + + Q+++  DI+SVD+ +     LTNTL ++ S  ++PD   I F S R G
Sbjct: 367 WSPDGKKLIFTGQRNKQYDIWSVDIATKKETPLTNTLTLDDSPEFTPDGKWIYFNSVRTG 426

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----------KFAIG 374
             +L+ M+ +GS Q++++ D+   +F P  SP G  I +  +  E          K  + 
Sbjct: 427 TMKLWRMKPDGSQQEQVTFDEYNDWF-PHISPDGKWIVYLSYPKEINPTDHPWYQKIYLR 485

Query: 375 VMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIF 406
           +M   G   R +         +  P+WSP  + + F
Sbjct: 486 LMPAAGGIPRNIAYVYGGQGTINVPSWSPDSKRIAF 521


>gi|327538740|gb|EGF25390.1| peptidase M28 [Rhodopirellula baltica WH47]
          Length = 1074

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 92/195 (47%), Gaps = 31/195 (15%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQ------SNATERLTNTLFINISASYSPDSSQIVF 318
           F ++G+    S   D   ++Y+ +L       +     LT+ +  +  ASYSPD  QIVF
Sbjct: 164 FRASGESRRYSWDYDPNYELYAAELDQIEPGTTKGLTALTSAMGYDAEASYSPDGKQIVF 223

Query: 319 ESDREG-------KEQ------------LYVMQSNGSDQKRISQDKEASY-FDPVWSPQG 358
            S+R         +EQ            LY+M ++GS+ KR++   E  Y   P +SP G
Sbjct: 224 ASNRAAYSRELTEREQEQFERDPAFMIDLYIMNADGSNVKRLT--NEPGYDGGPFFSPDG 281

Query: 359 DLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTG 415
             I + +F+  G    I  MK DGS  + L E + +  AP + PSG  L+F+  K G   
Sbjct: 282 QRICWRRFAPNGATAEIFTMKTDGSDVQRLTEINAMSWAPFYHPSGEFLVFTTNKHGFAN 341

Query: 416 SKLYSIDLNGRNETL 430
            +LY +  +G  E +
Sbjct: 342 FELYLVRADGEGEPV 356


>gi|284116166|ref|ZP_06386712.1| WD40 domain protein beta Propeller [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283829532|gb|EFC33886.1| WD40 domain protein beta Propeller [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 312

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 80/145 (55%), Gaps = 13/145 (8%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P ++++VF S+R+G  ++Y+M  +GSDQ R++  +    F PVWSP G+ + F     ++
Sbjct: 2   PTTAKVVFTSERDGNREIYMMNPDGSDQVRLTNHRADDTF-PVWSPTGERVLFAS-DRDR 59

Query: 371 FAIG----VMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           F +     +M  DG    R+  +  +  A TWSP G+ + +SR++    G+ +Y   ++G
Sbjct: 60  FTLSRDLYLMDPDGKNVRRVFGKSEDRSAATWSPDGKQIAYSRRE--LNGAYIYIGTIDG 117

Query: 426 RNETLI----NTPAYASDPQWVGFM 446
           + E  +     +PA++ D   + F+
Sbjct: 118 KKEERMAIGDGSPAWSPDGTQIAFL 142



 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 18/145 (12%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---KEQ 327
           + + + ++D   +IY ++   +   RLTN    +    +SP   +++F SDR+       
Sbjct: 6   KVVFTSERDGNREIYMMNPDGSDQVRLTNHRADDTFPVWSPTGERVLFASDRDRFTLSRD 65

Query: 328 LYVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDG-S 381
           LY+M  +G + +R+   S+D+ A+     WSP G  IA+++   +G    IG +  DG  
Sbjct: 66  LYLMDPDGKNVRRVFGKSEDRSAA----TWSPDGKQIAYSRRELNGAYIYIGTI--DGKK 119

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIF 406
           +ER+ + D    +P WSP G  + F
Sbjct: 120 EERMAIGDG---SPAWSPDGTQIAF 141



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 23/248 (9%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++++F SE   +      + +M+ DG++   LT  R    F P +SP  ++V +A+  D 
Sbjct: 5   AKVVFTSERDGN----REIYMMNPDGSDQVRLTNHRADDTF-PVWSPTGERVLFASDRDR 59

Query: 235 DILR--VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             L   +YLMD       +  G       A  +S +GK+   S ++     IY   +   
Sbjct: 60  FTLSRDLYLMDPDGKNVRRVFGKSEDRSAA-TWSPDGKQIAYSRRELNGAYIYIGTIDGK 118

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRI-SQDKEASYF 350
             ER+      + S ++SPD +QI F S  E K+ ++ ++      QK +  ++ + S+ 
Sbjct: 119 KEERMA---IGDGSPAWSPDGTQIAFLSGFENKQVRINILDVRTKKQKVLFPREAKPSWI 175

Query: 351 --DPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQ--APTWSPS 400
             D VWS   D +AF+   G K        +  +  DG+  + +  D+  +  +P WSP 
Sbjct: 176 NGDLVWSLTTDQLAFSWNPGAKKENVDMETLYTLNSDGTGLKRITSDAAPRETSPVWSPQ 235

Query: 401 GRSLIFSR 408
           G +L++ +
Sbjct: 236 GDALLYDK 243



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 32/229 (13%)

Query: 153 KIAHTISDDIYQ--SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           ++ +  +DD +   S TGE      R+LF S+     + ++ L +MD DG N+R +   +
Sbjct: 31  RLTNHRADDTFPVWSPTGE------RVLFASDRDRFTLSRD-LYLMDPDGKNVRRVF-GK 82

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR---IGNFRSMILAPRFSS 267
            +      +SP+ +++AY+     ++   Y+    ID   +    IG+      +P +S 
Sbjct: 83  SEDRSAATWSPDGKQIAYSR---RELNGAYIYIGTIDGKKEERMAIGDG-----SPAWSP 134

Query: 268 NGKR-ALISVQKDEAMDIYSVDLQSNATE----RLTNTLFINISASYSPDSSQIVFESDR 322
           +G + A +S  +++ + I  +D+++   +    R     +IN    +S  + Q+ F  + 
Sbjct: 135 DGTQIAFLSGFENKQVRINILDVRTKKQKVLFPREAKPSWINGDLVWSLTTDQLAFSWNP 194

Query: 323 EGK------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             K      E LY + S+G+  KRI+ D       PVWSPQGD + + K
Sbjct: 195 GAKKENVDMETLYTLNSDGTGLKRITSDAAPRETSPVWSPQGDALLYDK 243


>gi|218678398|ref|ZP_03526295.1| translocation protein TolB [Rhizobium etli CIAT 894]
          Length = 56

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/56 (53%), Positives = 38/56 (67%)

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           + APTW+P+GR L+F R+  G  G +LYSIDL G NE LI TP+Y S P W   M+
Sbjct: 1   MNAPTWAPNGRVLMFFRQAAGAGGPQLYSIDLTGYNEQLIKTPSYGSAPAWSPLME 56


>gi|91773135|ref|YP_565827.1| WD40-like beta propeller protein [Methanococcoides burtonii DSM
           6242]
 gi|91712150|gb|ABE52077.1| TolB-like beta propeller protein [Methanococcoides burtonii DSM
           6242]
          Length = 416

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 127/282 (45%), Gaps = 47/282 (16%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS---RDQIL-----FEPRFSPNQQKV 226
           +++LFVS +  +    + L +MD DG++ R LT      + +L     +   +SP   ++
Sbjct: 98  TKLLFVSNATGN----HELWIMDIDGSDKRQLTYGAHLENNLLGLAGRWGISWSPGSSQI 153

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y +   E+  R       I+   +++ N                    V KD   DI+ 
Sbjct: 154 VYVSASSEN--RNVWETVEINGKKEQMFNISK-----------------VSKD--YDIWI 192

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           VD   +   +LT +   NI A++  D  +I F S+  G   +++M  +GSD+ ++    +
Sbjct: 193 VDHDGSNNLKLTTSRKDNIGATWRSDGEKIAFVSNESGNGGIWIMNKDGSDKIQLV---D 249

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNL----QAPTWSPS 400
            S ++  WSP G  I + K   E +  +I VM  DGS ++ L  +S        P WSP 
Sbjct: 250 GSAYNIDWSPDGTKIVYVKGDHENYTSSIWVMDTDGSNKKPLTNNSKYFVSQSYPDWSPD 309

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           G  ++F+    G+   +++ ++ +G ++  I+       PQW
Sbjct: 310 GSKIVFNSGNIGEY--EIWIMNSDGTDQIRIDEGLM---PQW 346



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 96/194 (49%), Gaps = 19/194 (9%)

Query: 193 LCVMDRDGANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           + ++D DG+N   LT SR D I     +  + +K+A+ + +  +   +++M+        
Sbjct: 190 IWIVDHDGSNNLKLTTSRKDNI--GATWRSDGEKIAFVSNESGN-GGIWIMNKD---GSD 243

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE---AMDIYSVDLQSNATERLTNTLFINISAS 308
           +I           +S +G + ++ V+ D       I+ +D   +  + LTN     +S S
Sbjct: 244 KIQLVDGSAYNIDWSPDGTK-IVYVKGDHENYTSSIWVMDTDGSNKKPLTNNSKYFVSQS 302

Query: 309 Y---SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           Y   SPD S+IVF S   G+ ++++M S+G+DQ RI +        P WSP+GD I    
Sbjct: 303 YPDWSPDGSKIVFNSGNIGEYEIWIMNSDGTDQIRIDEG-----LMPQWSPKGDKIVTMA 357

Query: 366 FSGEKFAIGVMKKD 379
            +G+K AI V+  D
Sbjct: 358 INGDKMAISVINLD 371



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 42/222 (18%), Positives = 91/222 (40%), Gaps = 47/222 (21%)

Query: 263 PRFSSNGKRALIS-------VQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPD 312
           P++S++G + + +          D  +D + +D   +   +L +    L +  ++  SPD
Sbjct: 37  PQWSTDGDKIIYTSSDLENITSGDWVVDFWMMDADGSNKIQLASGDSMLGLGYNSPLSPD 96

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--------ASYFDPVWSPQGDLIAFT 364
            ++++F S+  G  +L++M  +GSD+++++            A  +   WSP    I + 
Sbjct: 97  GTKLLFVSNATGNHELWIMDIDGSDKRQLTYGAHLENNLLGLAGRWGISWSPGSSQIVYV 156

Query: 365 KFSGEK-------------------------FAIGVMKKDGSQE-RLLVEDSNLQAPTWS 398
             S E                          + I ++  DGS   +L     +    TW 
Sbjct: 157 SASSENRNVWETVEINGKKEQMFNISKVSKDYDIWIVDHDGSNNLKLTTSRKDNIGATWR 216

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASD 439
             G  + F   + G+ G  ++ ++ +G ++  L++  AY  D
Sbjct: 217 SDGEKIAFVSNESGNGG--IWIMNKDGSDKIQLVDGSAYNID 256


>gi|269925257|ref|YP_003321880.1| WD40 domain protein beta Propeller [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269788917|gb|ACZ41058.1| WD40 domain protein beta Propeller [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 419

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/128 (35%), Positives = 64/128 (50%), Gaps = 4/128 (3%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIYS+        RLT     +   S++P   QI F SDR G  Q+++M S+GS+  +++
Sbjct: 169 DIYSIRADGTGLVRLTGESSFDGMPSWAPTGEQIAFVSDRTGSLQIWIMNSDGSNPYQLT 228

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSG 401
             K  +  DP WSP G  IA+T   G    I  +   G +  +L + S  Q AP WSP G
Sbjct: 229 YGKIIAQ-DPDWSPDGKYIAYTL--GRDTGIAKIPAKGGKPIVLTDLSYPQSAPAWSPDG 285

Query: 402 RSLIFSRK 409
             + F  K
Sbjct: 286 SKITFMGK 293



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 107/228 (46%), Gaps = 13/228 (5%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           +I FVS+   +G ++  + +M+ DG+N   LT  +  I  +P +SP+ + +AY    D  
Sbjct: 201 QIAFVSDR--TGSLQ--IWIMNSDGSNPYQLTYGK-IIAQDPDWSPDGKYIAYTLGRDTG 255

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           I ++     +    P  + +      AP +S +G +     +  +   ++ ++   +   
Sbjct: 256 IAKIPAKGGK----PIVLTDLSYPQSAPAWSPDGSKITFMGKPGKYWQVFVMNADGSGLR 311

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPV 353
           ++T+    +    + PD  +IV+ + +      Q+++M ++G++ K+I+   E     P 
Sbjct: 312 QITHDPTDHRFPRWMPDGKRIVYNTRKSEHVIGQIFIMNADGTNVKQITMSTEGENGRPF 371

Query: 354 WSPQGDLIAF-TKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSP 399
            SP G  I F +      + I +M+ DGS+ +RL     +   P WSP
Sbjct: 372 PSPDGRYIVFNSNRLDNNWEIYIMRPDGSEVKRLTNTIGDDFEPCWSP 419


>gi|32474079|ref|NP_867073.1| TolB protein [Rhodopirellula baltica SH 1]
 gi|32444616|emb|CAD74618.1| probable TolB protein [Rhodopirellula baltica SH 1]
          Length = 1074

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 31/195 (15%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDL------QSNATERLTNTLFINISASYSPDSSQIVF 318
           F ++G+    S   D   ++Y+ +L       +     LT+ +  +   SYSPD  QIVF
Sbjct: 164 FRASGESRRYSWDYDPNYELYAAELDQIEPGSTKGLTALTSAMGYDAEGSYSPDGKQIVF 223

Query: 319 ESDREG---------KEQ----------LYVMQSNGSDQKRISQDKEASY-FDPVWSPQG 358
            S+R           +EQ          LY+M ++GS+ KR++   E  Y   P +SP G
Sbjct: 224 ASNRAAYSRELTEREREQFERDPAFMIDLYIMNADGSNVKRLTN--EPGYDGGPFFSPDG 281

Query: 359 DLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTG 415
             I + +F+  G    I  MK DGS  + L E + +  AP + PSG  L+F+  K G   
Sbjct: 282 QRICWRRFAPNGATAEIFTMKTDGSDVQRLTEINAMSWAPFYHPSGEFLVFTTNKHGFAN 341

Query: 416 SKLYSIDLNGRNETL 430
            +LY +  +G  E +
Sbjct: 342 FELYLVRADGEGEPV 356


>gi|296123962|ref|YP_003631740.1| hypothetical protein Plim_3729 [Planctomyces limnophilus DSM 3776]
 gi|296016302|gb|ADG69541.1| WD40 domain protein beta Propeller [Planctomyces limnophilus DSM
           3776]
          Length = 354

 Score = 70.5 bits (171), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 102/232 (43%), Gaps = 47/232 (20%)

Query: 216 EPRFSPNQQKVAYATYD-DEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRAL 273
           E  FSP+ Q + Y  Y       ++Y+   ++D + P+ +   R       F+ + KR L
Sbjct: 56  EGYFSPDGQWIVYQAYPVGYPFYQIYVQ--KLDEKTPRLLSTGRGRTTCAYFTPDQKRIL 113

Query: 274 ISVQ-------------KDEA---------------MDIYSVDLQSNATERLTNTLFINI 305
            +               +DEA               MD+Y+++      +RLT+T   + 
Sbjct: 114 FASAHTDPAIDLTEKKARDEAAQGGRRRYQWDFDPHMDLYTINFDGTGMQRLTDTPGYDA 173

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAF 363
             SYS D  QIVF S+R+G   LY+M ++GS+   I Q      +D  P +SP G  + F
Sbjct: 174 EGSYSADGKQIVFTSNRDGDADLYLMNADGSN---IRQLTNTPGYDGGPFFSPDGQWVIF 230

Query: 364 -----TKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSR 408
                 +   + +AI V   DG  E  L +  D     P + P G+SLI+SR
Sbjct: 231 RSDREKEHMLQLYAISV---DGKHEVQLTKNLDEVNWCPYFHPDGKSLIWSR 279


>gi|257455248|ref|ZP_05620483.1| putative TolB periplasmic receptor [Enhydrobacter aerosaccus SK60]
 gi|257447210|gb|EEV22218.1| putative TolB periplasmic receptor [Enhydrobacter aerosaccus SK60]
          Length = 436

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 161/400 (40%), Gaps = 77/400 (19%)

Query: 46  SPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNS 105
           S + IA   F   + + G    +V+ DL     F L S    +   ++  ++P    W  
Sbjct: 39  SNLQIAIVPFAGAESISG----IVTNDLTNLGQFTLDSNLPERPHSSSEVTLPV---WQH 91

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS---PASWRKIAHTISDDI 162
                LV G   +  +  + + F + +V   + + G +  +S     S R   H ++D I
Sbjct: 92  KAVPYLVVGNT-RSNRGNVEINFEVINVATGEVMQGLQTVTSKNNSQSLRMAGHKVADRI 150

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKN---SLCVMDRDGAN----------IRYLTPS 209
           Y+ +TG KGDF+ RI +V E   +G  KN    L + D DG N          I+ L  S
Sbjct: 151 YEILTGIKGDFSGRIAYVVE---TGKPKNRVSRLVISDVDGFNPKVIYEFNGTIKTLNTS 207

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            D   F  +  P+   + Y      +I         +  A   + NF++M      S +G
Sbjct: 208 ADNQTFTFQVQPD--TLGYPQVMSANI---------VSGAVSNLTNFKAMNYGASVSKDG 256

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE------ 323
           +    S  ++    IY    Q   + RLTN     I  S++PD    V+ SDR       
Sbjct: 257 RVIFSSSFENGIPQIYLA--QGGNSRRLTNDPVGAIYPSWAPDGQSFVYTSDRAGGKKGG 314

Query: 324 GKEQLYVMQ-SNGSDQK----------RISQD-KEASYFDPVWSPQGDLIAFTKFSGEKF 371
            K Q+Y+   + GS+Q+          RIS D K+ SY     + QG ++          
Sbjct: 315 NKGQIYLYNLATGSEQRLTGGGLSSMGRISNDGKKMSYLS--GANQGAVMDL-------- 364

Query: 372 AIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKK 410
                   GS+    V +  L +AP  SP+G+  I+S K 
Sbjct: 365 --------GSRSVTAVNNVGLSEAPGVSPNGQHYIYSNKN 396


>gi|29840730|ref|NP_829836.1| translocation protein TolB [Chlamydophila caviae GPIC]
 gi|32699690|sp|Q821G5|TOLB_CHLCV RecName: Full=Protein tolB; Flags: Precursor
 gi|29835080|gb|AAP05714.1| conserved domain protein [Chlamydophila caviae GPIC]
          Length = 427

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 18/310 (5%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILF-VSESVVSGIIKNS-LCVMDRDGANIRYL 206
           +S R+  H  +D I+ ++T   G  + +I+F +S++   G +K   L  +D DGAN+R L
Sbjct: 119 SSNRQKIHEAADKIHYALTKVPGISSGKIVFSLSKNPQDGELKQGELWSVDYDGANLRAL 178

Query: 207 TPSRDQILFEPRFS--PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           T   + +   P +    N     Y +Y    I +++L     +   K++ N +     P 
Sbjct: 179 T-QENSLSITPNWMNIGNCNPYLYVSYK-YGIPKIFLGSLE-NTTGKKVLNLQGNQFMPT 235

Query: 265 FSSNGKR-ALIS---VQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIVF 318
           FS   K  A IS      D  +  +S+        R  L  T     + S+SPD S++VF
Sbjct: 236 FSPRKKLLAFISDTYGNPDLFLQSFSLSKGVMGKPRRVLNETFGTQGNPSFSPDGSKLVF 295

Query: 319 ESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVM 376
            S+R+G+ +LY++Q +   Q  R+   K  +   P WSP G  IAF     G +      
Sbjct: 296 VSNRDGRPRLYIIQIDPEIQTPRLLTKKYRNSSCPSWSPDGKKIAFCSVIKGVRQICLYD 355

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPA 435
              G   +L     + + P+W+   + L++S    G+  S+LY + L   + + ++    
Sbjct: 356 LSTGKDYQLTTTPIDKEGPSWAIDSQHLVYSAGNSGE--SELYLLSLITQKTKKIVIGLG 413

Query: 436 YASDPQWVGF 445
               P W GF
Sbjct: 414 EKRFPSWGGF 423


>gi|251795982|ref|YP_003010713.1| periplasmic component of the Tol biopolymer transport system
           [Paenibacillus sp. JDR-2]
 gi|247543608|gb|ACT00627.1| periplasmic component of the Tol biopolymer transport system
           [Paenibacillus sp. JDR-2]
          Length = 285

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 16/157 (10%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G+      ++    DIY++        +LTNT  ++    YSPD   I F S R G
Sbjct: 123 WSPDGRTLAYCAERKGQYDIYTIPAIGGEETQLTNTPGLDDGPEYSPDGGYIWFNSVRTG 182

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG---------- 374
             Q++ M+++GS+Q +++ D+  S+F P  SP G L+A+  +     A G          
Sbjct: 183 LMQVWRMKADGSEQTQMTFDESNSWF-PHVSPDGKLVAYITYRKGDVAPGDHPANKHVEL 241

Query: 375 -VMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIF 406
            +M  +G + R LV+       +   +WSP  R L F
Sbjct: 242 RLMDSNGGEYRTLVQLFGGQGTINVNSWSPDSRKLAF 278



 Score = 43.9 bits (102), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   + + ++R+G+  +Y + + G ++ +++         P +SP G  I F     
Sbjct: 123 WSPDGRTLAYCAERKGQYDIYTIPAIGGEETQLTNTPGLD-DGPEYSPDGGYIWFNSVRT 181

Query: 369 EKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
               +  MK DGS Q ++  ++SN   P  SP G+ + +   + GD
Sbjct: 182 GLMQVWRMKADGSEQTQMTFDESNSWFPHVSPDGKLVAYITYRKGD 227


>gi|15965598|ref|NP_385951.1| hypothetical protein SMc00162 [Sinorhizobium meliloti 1021]
 gi|307302718|ref|ZP_07582474.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
 gi|307318566|ref|ZP_07598000.1| putative TolB-like protein [Sinorhizobium meliloti AK83]
 gi|15074779|emb|CAC46424.1| Probable periplasmic component of the Tol biopolymer transport
           system [Sinorhizobium meliloti 1021]
 gi|306895906|gb|EFN26658.1| putative TolB-like protein [Sinorhizobium meliloti AK83]
 gi|306903082|gb|EFN33673.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
          Length = 275

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 70/156 (44%), Gaps = 13/156 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G+       +D+  DIY++ +      RLT     N    +S D   I F S R G
Sbjct: 116 WSPDGRMLAYCGIRDQVFDIYTIPVDGGEERRLTQGQGRNDGPDWSADGEWIYFNSSRTG 175

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVM 376
           + Q++ ++ +G D +RI+      +F P  SP G  +    + G+ F         + +M
Sbjct: 176 RMQIWRVRPDGKDVQRITDSPYGDWF-PHPSPDGRHLLVLSYDGDVFDHPRDLDVRLRLM 234

Query: 377 KKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
             DG   R+L+E       +  P WSPSG +  F R
Sbjct: 235 DPDGGNARVLLELFGGQGTVNVPNWSPSGTAFAFVR 270



 Score = 36.6 bits (83), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 39/169 (23%), Positives = 71/169 (42%), Gaps = 19/169 (11%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KE 346
           D+ +  T  +  T  +  + ++SPD   ++   D     +LY +  +GSD   I      
Sbjct: 9   DIATGETRVVWQTERLVEAPNWSPDGKFLIINGD----GRLYRLGFDGSDPTEIDTGFAR 64

Query: 347 ASYFDPVWSPQGDLIAF---TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
               D   SP G  +     T+F     AI ++  +G   RL+  +       WSP GR 
Sbjct: 65  HCNNDHGISPDGSTLVISDKTEFGSS--AIYLLPAEGGTPRLVTRNLPSYWHGWSPDGRM 122

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLI-------NTPAYASDPQWVGF 445
           L +   +  D    +Y+I ++G  E  +       + P +++D +W+ F
Sbjct: 123 LAYCGIR--DQVFDIYTIPVDGGEERRLTQGQGRNDGPDWSADGEWIYF 169


>gi|313677004|ref|YP_004055000.1| amidohydrolase [Marivirga tractuosa DSM 4126]
 gi|312943702|gb|ADR22892.1| amidohydrolase [Marivirga tractuosa DSM 4126]
          Length = 1146

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 4/130 (3%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIYS+        ++T  +  ++   YSPD   IVF SD+ G + ++ M     + K+I+
Sbjct: 74  DIYSIPFTGGKATKITEGMPYDVHPRYSPDGKSIVFISDKSGSDNIWTMDLATEEMKQIT 133

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVEDSNLQA--PTWSP 399
           +D   +YF   W+P G+ I   K     K  I   K+ GS  +L+ +  NL+   PT SP
Sbjct: 134 KDDNQNYFSADWTPDGEYIIGAKGRRNIKLHI-YHKEGGSGAQLIDKPDNLKTTDPTVSP 192

Query: 400 SGRSLIFSRK 409
            G+ L FS++
Sbjct: 193 DGKLLYFSKR 202



 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 10/165 (6%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFE 319
           + PR+S +GK  +    K  + +I+++DL +   +++T     N  SA ++PD   I+  
Sbjct: 96  VHPRYSPDGKSIVFISDKSGSDNIWTMDLATEEMKQITKDDNQNYFSADWTPDGEYIIGA 155

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------KF 371
             R   +     +  GS  + I +       DP  SP G L+ F+K +          ++
Sbjct: 156 KGRRNIKLHIYHKEGGSGAQLIDKPDNLKTTDPTVSPDGKLLYFSKRNSAWNYNAQFPQY 215

Query: 372 AIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            IG    +DG    +     +   PT SP G+ L++  + + +TG
Sbjct: 216 QIGTYDMEDGDMATITSRYGSAFTPTISPDGKWLVYGTRFETETG 260



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRI 341
           +Y +DL +   +RLT   F     ++SPD SQIVF +  ++EG   LY + SNG  +   
Sbjct: 376 LYVMDLPNGDPKRLTKHKFTEAMPAWSPDGSQIVFSTWEEKEGG-HLYKINSNGRGKAVK 434

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                A Y DP WS   + I F + + + +
Sbjct: 435 LTQNPALYLDPEWSYTKNRIVFNRGANQVY 464



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 11/108 (10%)

Query: 341 ISQDKEA---SYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPT 396
           IS +KEA      D V SP G  +AFT  +     + VM   +G  +RL         P 
Sbjct: 345 ISDEKEAFVTQIRDGVPSPDGSKLAFTALN----RLYVMDLPNGDPKRLTKHKFTEAMPA 400

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET--LINTPAYASDPQW 442
           WSP G  ++FS  ++ + G  LY I+ NGR +   L   PA   DP+W
Sbjct: 401 WSPDGSQIVFSTWEEKE-GGHLYKINSNGRGKAVKLTQNPALYLDPEW 447


>gi|320160892|ref|YP_004174116.1| hypothetical protein ANT_14880 [Anaerolinea thermophila UNI-1]
 gi|319994745|dbj|BAJ63516.1| hypothetical protein ANT_14880 [Anaerolinea thermophila UNI-1]
          Length = 287

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 95/207 (45%), Gaps = 8/207 (3%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++++DT  D+    + N  S      ++ +G+    +  +   +DI+ +D Q       T
Sbjct: 39  IWMLDTSNDKL-LNLSNKSSDDFWQTWAPDGRYLAFTSDRSGNLDIWILDTQKEVVFNYT 97

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           N        ++SPD   + + S+REG   ++ M S+GS++  ++         P WSP  
Sbjct: 98  NNPEDEGWPAWSPDGKYLAYASNREGTYDIWRMNSDGSNRVNLTPGDGDDGL-PAWSPDS 156

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             I F+      + + +   +G + E++  ++++   P WSP G+ + F  K+DG++   
Sbjct: 157 QRIVFSSNRNGNYDLYIASVNGGELEQITSDEADDIMPAWSPDGKKIAFVSKRDGNSEIY 216

Query: 418 LYSIDLNG-----RNETLINTPAYASD 439
           LY I   G     +N     TPA+  D
Sbjct: 217 LYDIASKGVTNLTKNPYNDETPAWYPD 243



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 102/223 (45%), Gaps = 27/223 (12%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           F   ++P+ + +A+ T D    L ++++DT+ +       N       P +S +GK    
Sbjct: 60  FWQTWAPDGRYLAF-TSDRSGNLDIWILDTQKEVVFNYTNNPEDEGW-PAWSPDGKYLAY 117

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +  ++   DI+ ++   +    LT     +   ++SPDS +IVF S+R G   LY+   N
Sbjct: 118 ASNREGTYDIWRMNSDGSNRVNLTPGDGDDGLPAWSPDSQRIVFSSNRNGNYDLYIASVN 177

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS---- 390
           G + ++I+ D EA    P WSP G  IAF           V K+DG+ E  L + +    
Sbjct: 178 GGELEQITSD-EADDIMPAWSPDGKKIAF-----------VSKRDGNSEIYLYDIASKGV 225

Query: 391 --------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                   N + P W P G  ++F  ++  D    +YS+  +G
Sbjct: 226 TNLTKNPYNDETPAWYPDGSRILFVSER-FDNQWDVYSMKPDG 267



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 21/193 (10%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDT----RIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           P +SP+ + +AYA+ + E    ++ M++    R++  P   G+    +  P +S + +R 
Sbjct: 106 PAWSPDGKYLAYAS-NREGTYDIWRMNSDGSNRVNLTP---GDGDDGL--PAWSPDSQRI 159

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           + S  ++   D+Y   +     E++T+    +I  ++SPD  +I F S R+G  ++Y+  
Sbjct: 160 VFSSNRNGNYDLYIASVNGGELEQITSDEADDIMPAWSPDGKKIAFVSKRDGNSEIYLYD 219

Query: 333 SNGSDQKRISQDKEASYFD--PVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVE 388
                 K ++   +  Y D  P W P G  I F   +F  + + +  MK DGS+ R L  
Sbjct: 220 IA---SKGVTNLTKNPYNDETPAWYPDGSRILFVSERFDNQ-WDVYSMKPDGSEVRRLTH 275

Query: 389 DSNLQ--APTWSP 399
           D  LQ   P W P
Sbjct: 276 DE-LQEFHPMWRP 287



 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 11/197 (5%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           ++++     S   R L    + +  +I+ +D  ++    L+N    +   +++PD   + 
Sbjct: 13  AVLMLSACGSTPTRYLTFTIRAQNSEIWMLDTSNDKLLNLSNKSSDDFWQTWAPDGRYLA 72

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SDR G   ++++ +        + + E   + P WSP G  +A+       + I  M 
Sbjct: 73  FTSDRSGNLDIWILDTQKEVVFNYTNNPEDEGW-PAWSPDGKYLAYASNREGTYDIWRMN 131

Query: 378 KDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT--- 433
            DGS    L   D +   P WSP  + ++FS  ++G+    LY   +NG     I +   
Sbjct: 132 SDGSNRVNLTPGDGDDGLPAWSPDSQRIVFSSNRNGNY--DLYIASVNGGELEQITSDEA 189

Query: 434 ----PAYASDPQWVGFM 446
               PA++ D + + F+
Sbjct: 190 DDIMPAWSPDGKKIAFV 206


>gi|302039356|ref|YP_003799678.1| putative protein TolB (fragment) [Candidatus Nitrospira defluvii]
 gi|300607420|emb|CBK43753.1| putative Protein TolB (fragment) [Candidatus Nitrospira defluvii]
          Length = 377

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 44/240 (18%)

Query: 205 YLTPSRDQILFE------PRFSPNQQKVAYA---TYDDEDILRVYLMDTRIDRA-PKRIG 254
           Y  P   ++L+       P   P  ++   A     DD D+  V     RID   P+R+ 
Sbjct: 123 YFFPGDRRVLYSSTHLRGPNCPPKPKRDGGAYRWALDDYDLFSV-----RIDGLDPQRLT 177

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           N          S NGK  + +  +D  +DIY++DL      RLT  +  +  A +SPDS 
Sbjct: 178 NTPGYDAEATVSPNGKSIVWTSMRDGDLDIYAMDLDGTHPRRLTQEIGYDGGAFFSPDSK 237

Query: 315 QIVFESDR--------------------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +IV+ +                       G+ ++++M ++GS++++++ +  AS F P +
Sbjct: 238 RIVYRAQHPSNQEELDQYKALLAQNLVEPGRLEIFIMNADGSNKQQVTNNG-ASNFSPFF 296

Query: 355 SPQGDLIAFTKFSGEKFAIG-------VMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIF 406
            P G  + F      + A G       ++ +DGS QERL  +      P +SP G+ L++
Sbjct: 297 HPDGHRVIFASNVETRNAAGRPEFHLYLVTEDGSGQERLTFDGQFNSFPMFSPDGKMLVW 356


>gi|134105212|pdb|2OJH|A Chain A, The Structure Of Putative Tolb From Agrobacterium
           Tumefaciens
          Length = 297

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 13/156 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GK       +D+  DIYS D+ S    RLT+    N    YSPD   I F S R G
Sbjct: 136 WSPDGKSFTYCGIRDQVFDIYSXDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTG 195

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVM 376
           + Q++ ++ +GS  +RI+      +F P  SP GD + F  +  + F         + + 
Sbjct: 196 QXQIWRVRVDGSSVERITDSAYGDWF-PHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLX 254

Query: 377 KKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
             DG     L +         +P WSP G    + R
Sbjct: 255 DXDGGNVETLFDLFGGQGTXNSPNWSPDGDEFAYVR 290



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 13/184 (7%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQ 315
           +  AP +S +GK  L++    E + +Y + L  + +    +T F  I       SPD + 
Sbjct: 43  LFEAPNWSPDGKYLLLN---SEGL-LYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL 98

Query: 316 IVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                  E GK  +Y++ S G    R+      SY+   WSP G    +     + F I 
Sbjct: 99  YAISDKVEFGKSAIYLLPSTGG-TPRLXTKNLPSYWH-GWSPDGKSFTYCGIRDQVFDIY 156

Query: 375 VMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
               D G + RL   +     P +SP GR + F+  + G    +++ + ++G +   I  
Sbjct: 157 SXDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQX--QIWRVRVDGSSVERITD 214

Query: 434 PAYA 437
            AY 
Sbjct: 215 SAYG 218


>gi|85375068|ref|YP_459130.1| hypothetical protein ELI_11205 [Erythrobacter litoralis HTCC2594]
 gi|84788151|gb|ABC64333.1| hypothetical protein ELI_11205 [Erythrobacter litoralis HTCC2594]
          Length = 1087

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 11/137 (8%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +      R+   L   +   +SPD S+I F SDR G + +++M+++GSD+K ++
Sbjct: 95  DIYTMPISGGTPTRIAEGLAWEVQPRFSPDGSRIAFTSDRGGGDNIWLMRTDGSDKKALT 154

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIG---VMKKDGSQERLLVE------DSN 391
           ++       P WSP G  IA  K   +G     G   +    G     LVE         
Sbjct: 155 KEDFRLMHQPTWSPDGQFIAAKKHYTTGRSLGTGEVWLYHVSGGGGVKLVERPSETHQKE 214

Query: 392 LQAPTWSPSGRSLIFSR 408
           L  P ++P G  + F+R
Sbjct: 215 LGEPIYAPDGSGIYFTR 231



 Score = 44.7 bits (104), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 9/129 (6%)

Query: 298 TNTLFINIS--ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++T   NI   A+ SPD  ++VFE+      +LYV    G   +R++       + P +S
Sbjct: 382 SDTFTTNIPKFATVSPDGRRVVFET----LGKLYVKNVGGGQPRRLTSGSAIEAW-PAFS 436

Query: 356 PQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  +AF +++ +    I V   +G   R +  +  +  +P +SP GR+++F ++  G 
Sbjct: 437 RDGRSLAFVRWTDDGLGEIVVGDANGGNLRTVTRQPGHYASPRFSPDGRTIVFEKRSGGF 496

Query: 414 TGSKLYSID 422
             +  YS D
Sbjct: 497 LTAPEYSAD 505


>gi|108763117|ref|YP_628358.1| WD-40-like repeat-containing amidohydrolase [Myxococcus xanthus DK
           1622]
 gi|108466997|gb|ABF92182.1| WD40-like repeat/amidohydrolase domain protein [Myxococcus xanthus
           DK 1622]
          Length = 1057

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 21/179 (11%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +     + LT+ +  ++   +SPD  +IVF SDR G + ++V+  +GS+ + ++
Sbjct: 39  DIYVLPMGGGEAKALTSGVAWDMQPRFSPDGKRIVFTSDRGGGDNIWVVDRDGSNARAVT 98

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-----VMKKDGSQERLLVEDSN----LQ 393
           ++K      P WSP G  I   K    + ++G     +  + G +   L E +N    L 
Sbjct: 99  EEKFRLLNSPAWSPDGQFIVARKHFTARRSLGAGEVWMYHRAGGEGVQLTERTNDQKDLG 158

Query: 394 APTWSPSGRSLIFSR--------KKDGDTGSKLYSI---DLNGRN-ETLINTPAYASDP 440
            P +SP GR + FS+        + + D   ++Y+I   DL  +  E  I  P  A  P
Sbjct: 159 EPAFSPDGRHVYFSQDVSPGKSFEYNKDPNGQIYAIQRLDLETKEIEPFITGPGGAIRP 217


>gi|88803169|ref|ZP_01118695.1| hypothetical protein PI23P_11292 [Polaribacter irgensii 23-P]
 gi|88780735|gb|EAR11914.1| hypothetical protein PI23P_11292 [Polaribacter irgensii 23-P]
          Length = 1135

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 12/175 (6%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L   R+ R     G + S+ ++P    +GK  L S+  D    +Y++  +     R+T+ 
Sbjct: 47  LESGRMIRFNTNEGTWLSLDMSP----DGKTILFSMLGD----LYTIPFKGGKAIRITDG 98

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           L ++   SYSPD  +I F SDR+G + +++M     + +++++DK        WSP G+ 
Sbjct: 99  LALDAQPSYSPDGKRIAFTSDRDGNDNVWIMDLASKETRQVTKDKRGLVESVAWSPDGEY 158

Query: 361 IAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDG 412
           I   K       + +  KD GS  +L+ E  +L+   P +SP  + + +S +  G
Sbjct: 159 IVAAK-GKRNLKLHLYHKDAGSGTQLIKEPKDLKTVEPVFSPDNKYIYYSARTGG 212



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 4/90 (4%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRI 341
           +Y + L +   ERLT    I    ++SP+  +IV+   SD +G   LY + S G   +R+
Sbjct: 383 LYVMKLPNGKPERLTKMDLIETQPNWSPNGKEIVYATWSDIDGG-HLYKVNSKGGKPQRL 441

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +    A Y  PVW  + + I FTK S + F
Sbjct: 442 TT-VSAIYNTPVWDAKTNRIVFTKGSAQSF 470



 Score = 43.9 bits (102), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 83/208 (39%), Gaps = 41/208 (19%)

Query: 266 SSNGKRALISVQKDEAMDI-YSVDLQ-------------SNATERLTNTLFINISASYSP 311
           S  GK   I V  D A++I + VD+              S+ TE L N +    +A  SP
Sbjct: 314 SYGGKIYRIPVSGDAAIEIPFEVDVALAIGPKLEFKYPISDDTELLANQIR---NAKPSP 370

Query: 312 DSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--- 367
           D +QIVF +      +LYVM+  NG  ++    D   +   P WSP G  I +  +S   
Sbjct: 371 DGTQIVFNA----LNKLYVMKLPNGKPERLTKMDLIET--QPNWSPNGKEIVYATWSDID 424

Query: 368 -GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-----KDGDT------G 415
            G  +   V  K G  +RL    +    P W      ++F++      K+  T      G
Sbjct: 425 GGHLYK--VNSKGGKPQRLTTVSAIYNTPVWDAKTNRIVFTKGSAQSFKNAYTRAAFSGG 482

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWV 443
             L  I   G N T I       +P +V
Sbjct: 483 EDLAWISSEGGNNTFIAKANGRENPHFV 510


>gi|159901043|ref|YP_001547290.1| serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159894082|gb|ABX07162.1| serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 646

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 61/229 (26%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           ++D    IY +       ++LT TL  N     SPD  QI F S+R+G+EQ+YVM+ +GS
Sbjct: 374 EEDGDYQIYRIPAMGGEPQQLT-TLGSNYGGVVSPDGRQIAFTSERDGREQVYVMKVDGS 432

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAF----------------------------TKFSG 368
           DQ+R++ D     + P WSP G  +A+                            TK  G
Sbjct: 433 DQRRVTNDPGRCEY-PSWSPDGKQLAYAHRRLDDLKENSSTIYIQALDQTEGQQLTKMWG 491

Query: 369 ---------------------EKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLI 405
                                E+  + +++ DGS  +++    D +     WSP G+S+ 
Sbjct: 492 TMPTWGQQGIVFTSRDIVENIEQLGLAIIQPDGSGLKIINPTRDRDEHYAEWSPDGKSIA 551

Query: 406 FSRKKDGDTGSK-LYSIDLNGRNETL-------INTPAYASDPQWVGFM 446
           +       T ++ ++ ++ +G N          +  P ++ D +W+ F+
Sbjct: 552 YVAGDSQRTITRQIWVMNADGSNPHPLTKGLGGVTQPRWSPDGKWIVFL 600



 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 29/208 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQ- 277
           SP+ +++A+ T + +   +VY+M  ++D +  +R+ N       P +S +GK+   + + 
Sbjct: 406 SPDGRQIAF-TSERDGREQVYVM--KVDGSDQRRVTNDPGRCEYPSWSPDGKQLAYAHRR 462

Query: 278 ----KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ--IVFESDR--EGKEQL- 328
               K+ +  IY   L     ++LT            P   Q  IVF S    E  EQL 
Sbjct: 463 LDDLKENSSTIYIQALDQTEGQQLTKMW------GTMPTWGQQGIVFTSRDIVENIEQLG 516

Query: 329 -YVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQ 382
             ++Q +GS  K I  ++D++  Y +  WSP G  IA+     ++     I VM  DGS 
Sbjct: 517 LAIIQPDGSGLKIINPTRDRDEHYAE--WSPDGKSIAYVAGDSQRTITRQIWVMNADGSN 574

Query: 383 ERLLVED-SNLQAPTWSPSGRSLIFSRK 409
              L +    +  P WSP G+ ++F  K
Sbjct: 575 PHPLTKGLGGVTQPRWSPDGKWIVFLAK 602



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 45/226 (19%), Positives = 95/226 (42%), Gaps = 37/226 (16%)

Query: 58  IDELGGKVSEVVSKDLQ----------RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLG 107
           +  LG     VVS D +          R  V+ +    S ++++TN      +  W+  G
Sbjct: 394 LTTLGSNYGGVVSPDGRQIAFTSERDGREQVYVMKVDGSDQRRVTNDPGRCEYPSWSPDG 453

Query: 108 AQVLVTGRVIKEGKDRL-RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            Q+    R + + K+    +  +  D  + +Q+   K + +  +W               
Sbjct: 454 KQLAYAHRRLDDLKENSSTIYIQALDQTEGQQL--TKMWGTMPTW--------------- 496

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
            G++G     I+F S  +V  I +  L ++  DG+ ++ + P+RD+      +SP+ + +
Sbjct: 497 -GQQG-----IVFTSRDIVENIEQLGLAIIQPDGSGLKIINPTRDRDEHYAEWSPDGKSI 550

Query: 227 AYATYDDEDIL--RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           AY   D +  +  ++++M+      P  +      +  PR+S +GK
Sbjct: 551 AYVAGDSQRTITRQIWVMNAD-GSNPHPLTKGLGGVTQPRWSPDGK 595


>gi|224418200|ref|ZP_03656206.1| translocation protein TolB [Helicobacter canadensis MIT 98-5491]
 gi|253827527|ref|ZP_04870412.1| translocation protein TolB precursor [Helicobacter canadensis MIT
           98-5491]
 gi|253510933|gb|EES89592.1| translocation protein TolB precursor [Helicobacter canadensis MIT
           98-5491]
          Length = 426

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 154/337 (45%), Gaps = 39/337 (11%)

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS--PASWRKIAHTISDDIYQSITGE 169
           V+  VI++G   L V  +L+DV     ++ K++ SS  PA +  +AH ++ DI   I   
Sbjct: 99  VSAEVIRDG---LIVNLQLYDVNAGNLVLNKEYKSSQLPA-YPFLAHKLAVDINDYIKAP 154

Query: 170 KGDFNSRILFVSESVVSG---IIKNSLCVMDRD-----GANIRYLTPSRDQILFEPRFSP 221
             D+  R++ VS    SG   II +   +  ++     G NI             P+++ 
Sbjct: 155 SVDWMQRMVVVSYYTKSGESEIISSDYTLTYKNTLISGGLNIF------------PKWAN 202

Query: 222 NQQKVAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            +Q   Y T Y D+  L  + +   I    K+I +   M++A   S +  R L+++  +E
Sbjct: 203 EEQSAFYYTKYLDKPTLFKFDL---ITGENKQILSSEGMLVASDVSKDSNRLLLTMAPNE 259

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             DIY  DL +   ++LTN   I++SA++  D  +++F SDR G   ++ +  +G     
Sbjct: 260 QADIYLYDLSNGTLKKLTNYRGIDVSANFIEDEKRVMFISDRLGYPNVFAISVDGESAGS 319

Query: 341 ISQDKEASYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           + Q       +   +  G+ I ++      +F    F + ++       R L  +   Q 
Sbjct: 320 VEQMVFHGRNNNAANAYGNYIVYSSRETSEEFGSNTFNLYLVSTKSDFIRRLSANGVNQL 379

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           P ++  G ++++ + ++    S L  I LN  N+TL+
Sbjct: 380 PRFAKDGETIMYIKHENNQ--SALGIIRLN-YNKTLL 413


>gi|46447484|ref|YP_008849.1| translocation protein TolB [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|67461964|sp|Q6MA25|TOLB_PARUW RecName: Full=Protein tolB; Flags: Precursor
 gi|46401125|emb|CAF24574.1| putative TolB protein [Candidatus Protochlamydia amoebophila UWE25]
          Length = 469

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 142/305 (46%), Gaps = 30/305 (9%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILF-VSESVVSGIIKNSLCV--MDRDGANIRYLTP 208
           R++ H I+D I++++ G +G  +++IL+ V   +V    K S  V   D DG N R +T 
Sbjct: 156 RRLIHRIADTIHKALFGVEGVASTKILYTVKTPLVDNKQKLSSEVWEADYDGENARQITQ 215

Query: 209 SRDQILFEPRFSPNQQ-----KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            +      P + P ++        Y +Y      ++Y+ + + D   +R+   +   L P
Sbjct: 216 EKS-FCVNPTYIPPKKGFLSGNFLYVSYQAGQS-KIYIANLK-DGKGQRLLKLKGNQLMP 272

Query: 264 RFSSN-GKRALIS---VQKDEAMDIYSVD--LQSNATERLTNTLFINISASYSPDSSQIV 317
             S    K A IS      D  + +++ +  +     +  +  L    + S++PD +++ 
Sbjct: 273 TLSQQRDKIAFISDATGNPDLFLQLFNPETGVVGKPQQIFSAKLATQSTPSFNPDGTKVA 332

Query: 318 FESDREGKEQLYVMQ--SNGSDQKRI------SQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           F SD++G  ++YV+     G+  K I       +++E+S   P WSP G  IA+   +  
Sbjct: 333 FVSDKDGSPKIYVIAIPEPGTSLKNIKATLITKRNRESS--APAWSPDGTKIAYCSRTDG 390

Query: 370 KFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              I +     +QE+ L +   N + P+W+P+   L+++     D  S+LY I+LN    
Sbjct: 391 IRQIWIYDFTTNQEKQLTQGPINKENPSWAPNSLHLVYNSADTND--SQLYLINLNQTEA 448

Query: 429 TLINT 433
           T I +
Sbjct: 449 TRITS 453



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 12/146 (8%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--------APRFSSN 268
           P F+P+  KVA+ + D +   ++Y++   I      + N ++ ++        AP +S +
Sbjct: 322 PSFNPDGTKVAFVS-DKDGSPKIYVI--AIPEPGTSLKNIKATLITKRNRESSAPAWSPD 378

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G +     + D    I+  D  +N  ++LT       + S++P+S  +V+ S      QL
Sbjct: 379 GTKIAYCSRTDGIRQIWIYDFTTNQEKQLTQGPINKENPSWAPNSLHLVYNSADTNDSQL 438

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVW 354
           Y++  N ++  RI+  K    + P W
Sbjct: 439 YLINLNQTEATRITSGKGEKRY-PNW 463


>gi|313141735|ref|ZP_07803928.1| translocation protein TolB [Helicobacter canadensis MIT 98-5491]
 gi|313130766|gb|EFR48383.1| translocation protein TolB [Helicobacter canadensis MIT 98-5491]
          Length = 417

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 154/337 (45%), Gaps = 39/337 (11%)

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS--PASWRKIAHTISDDIYQSITGE 169
           V+  VI++G   L V  +L+DV     ++ K++ SS  PA +  +AH ++ DI   I   
Sbjct: 90  VSAEVIRDG---LIVNLQLYDVNAGNLVLNKEYKSSQLPA-YPFLAHKLAVDINDYIKAP 145

Query: 170 KGDFNSRILFVSESVVSG---IIKNSLCVMDRD-----GANIRYLTPSRDQILFEPRFSP 221
             D+  R++ VS    SG   II +   +  ++     G NI             P+++ 
Sbjct: 146 SVDWMQRMVVVSYYTKSGESEIISSDYTLTYKNTLISGGLNIF------------PKWAN 193

Query: 222 NQQKVAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            +Q   Y T Y D+  L  + +   I    K+I +   M++A   S +  R L+++  +E
Sbjct: 194 EEQSAFYYTKYLDKPTLFKFDL---ITGENKQILSSEGMLVASDVSKDSNRLLLTMAPNE 250

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             DIY  DL +   ++LTN   I++SA++  D  +++F SDR G   ++ +  +G     
Sbjct: 251 QADIYLYDLSNGTLKKLTNYRGIDVSANFIEDEKRVMFISDRLGYPNVFAISVDGESAGS 310

Query: 341 ISQDKEASYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           + Q       +   +  G+ I ++      +F    F + ++       R L  +   Q 
Sbjct: 311 VEQMVFHGRNNNAANAYGNYIVYSSRETSEEFGSNTFNLYLVSTKSDFIRRLSANGVNQL 370

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           P ++  G ++++ + ++    S L  I LN  N+TL+
Sbjct: 371 PRFAKDGETIMYIKHENNQ--SALGIIRLN-YNKTLL 404


>gi|78358671|ref|YP_390120.1| tolB protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
 gi|78221076|gb|ABB40425.1| tolB protein, putative [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 441

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/338 (22%), Positives = 152/338 (44%), Gaps = 17/338 (5%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK-IAHTISDDIYQSITG 168
           ++VTG    +     RVE R+++      ++GK ++ +  S    +A     D  + +TG
Sbjct: 111 LIVTGWPQTQQGQSSRVELRVYETGQGSMLLGKAYYVTSESLLPVVADKFCSDFMKMLTG 170

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
               F S + FVS+S      +  +  +   G ++R LT +   I   P +SP+ + V +
Sbjct: 171 RGDFFLSTLAFVSQSRNG---QKDIWAVRPTGRDLRQLT-AVQGIALSPSWSPDGRYVIF 226

Query: 229 ATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +   +    L V+    RI+   + I    + ++ P F  +  R  +S+  +   DI+ +
Sbjct: 227 SHIGERSHALGVW---DRINNRTQLIRFPGNTVIGPTFLPD-NRVAVSLAVNGNPDIFLL 282

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +      + L  +  I++S S      ++ F S R G   +++   +    +RIS  +E 
Sbjct: 283 NHIFKKQKVLEQSWGIDVSPSLDATGKKMAFVSSRLGNPNIFLKDLDSGSVRRIS--REG 340

Query: 348 SY-FDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            Y   P  SP G LI +++ +G+   I V     G ++++     N + P+++P    + 
Sbjct: 341 KYNTSPDISPDGTLIVYSRRTGDGHRIFVHDLVTGREKQITFGPGNDEMPSFAPDSYFIA 400

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQW 442
           F+  + G    K+Y    +G    +++T ++ AS P W
Sbjct: 401 FASNRSGKY--KVYLTTRHGGTPKMVDTGSHDASFPAW 436



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 1/98 (1%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +P  S +G   + S +  +   I+  DL +   +++T     +   S++PDS  I F S+
Sbjct: 345 SPDISPDGTLIVYSRRTGDGHRIFVHDLVTGREKQITFGPGNDEMPSFAPDSYFIAFASN 404

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           R GK ++Y+   +G   K +      + F P W    D
Sbjct: 405 RSGKYKVYLTTRHGGTPKMVDTGSHDASF-PAWGKLSD 441


>gi|86135211|ref|ZP_01053793.1| putative TolB protein [Polaribacter sp. MED152]
 gi|85822074|gb|EAQ43221.1| putative TolB protein [Polaribacter sp. MED152]
          Length = 365

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 31/196 (15%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++ DI+  DL+ N  ++LTN +  +   + SP   +IVF S R G  +LY M  +G+D K
Sbjct: 150 DSFDIFVADLEGNIVKQLTNEVGYDAEPTVSPKGDKIVFTSTRSGDLELYTMNIDGTDVK 209

Query: 340 RISQDKEASYFDPVWSPQG--------------------DLIAFTKFSGEKFAIGVMKKD 379
           +I+ D+        +SP G                    DL+A       +  + +   D
Sbjct: 210 QIT-DELGYDGGAFFSPDGTKIIFRSSRPKTEEEIKAYKDLLAEGLVEPTEMELYICNAD 268

Query: 380 GSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTG--SKLYSIDLNGRN-------ET 429
           GS  R L +  N   +P + PSG+ ++FS   + + G    LY ID++G+N       ET
Sbjct: 269 GSDLRQLTDLGNANWSPFFHPSGKKILFSSNFEAERGFPFNLYLIDIDGKNLERVTHGET 328

Query: 430 LINTPAYASDPQWVGF 445
               P +++D + + F
Sbjct: 329 FDAFPVFSNDGKKLAF 344



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 54/265 (20%), Positives = 105/265 (39%), Gaps = 43/265 (16%)

Query: 189 IKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQ----------KVAYATYDDED 235
            KNS+  M   G       Y  P    I++      +++          K  +  YD  D
Sbjct: 94  FKNSMPPMISTGKGRTTCAYFLPDNKHIIYASTHLVDEECPEVPLRKNGKYIWPVYDSFD 153

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           I    L    + +    +G        P  S  G + + +  +   +++Y++++     +
Sbjct: 154 IFVADLEGNIVKQLTNEVG----YDAEPTVSPKGDKIVFTSTRSGDLELYTMNIDGTDVK 209

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKE--------------------QLYVMQSNG 335
           ++T+ L  +  A +SPD ++I+F S R   E                    +LY+  ++G
Sbjct: 210 QITDELGYDGGAFFSPDGTKIIFRSSRPKTEEEIKAYKDLLAEGLVEPTEMELYICNADG 269

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEK---FAIGVMKKDGSQERLLVEDSN 391
           SD ++++    A++  P + P G  I F + F  E+   F + ++  DG     +     
Sbjct: 270 SDLRQLTDLGNANW-SPFFHPSGKKILFSSNFEAERGFPFNLYLIDIDGKNLERVTHGET 328

Query: 392 LQA-PTWSPSGRSLIFSRKKDGDTG 415
             A P +S  G+ L FS  ++   G
Sbjct: 329 FDAFPVFSNDGKKLAFSSNRNNGGG 353


>gi|116626707|ref|YP_828863.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229869|gb|ABJ88578.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 955

 Score = 68.6 bits (166), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 74/162 (45%), Gaps = 21/162 (12%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASYFDPV 353
           ++T    + I AS+SPD  QI F S+R G  ++Y   S   GSD +  +   +A   +P 
Sbjct: 413 QVTTVPGLAIGASFSPDGKQIAFSSNRNGWFEIYTKPSEGPGSDHQVTTDGNQA--VEPA 470

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-- 411
           WSP G  IA+   +  K  + ++   G     + E  +  AP WSP GR+L F   +   
Sbjct: 471 WSPDGKWIAYHSVA--KHGLWMVPSGGGTPHRISEFGS--APAWSPDGRTLAFRSYETSS 526

Query: 412 -------GDTGSKLYSIDLNGRNETLI----NTPAYASDPQW 442
                  GD  S ++ +  +G N   +    N P   +DP W
Sbjct: 527 LALSDWPGDGESTIWIVAADGTNLQQLTQPRNPPGQHADPSW 568



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 73/166 (43%), Gaps = 22/166 (13%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQI 316
            + +   FS +GK+   S  ++   +IY+   +   ++ ++T      +  ++SPD   I
Sbjct: 419 GLAIGASFSPDGKQIAFSSNRNGWFEIYTKPSEGPGSDHQVTTDGNQAVEPAWSPDGKWI 478

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            + S    K  L+++ S G    RIS+   A    P WSP G  +AF  +     A+   
Sbjct: 479 AYHS--VAKHGLWMVPSGGGTPHRISEFGSA----PAWSPDGRTLAFRSYETSSLALSDW 532

Query: 377 KKDGSQERLLV--EDSNLQA-------------PTWSPSGRSLIFS 407
             DG     +V  + +NLQ              P+WSP G+ LIF+
Sbjct: 533 PGDGESTIWIVAADGTNLQQLTQPRNPPGQHADPSWSPDGKRLIFA 578



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 48/231 (20%), Positives = 100/231 (43%), Gaps = 11/231 (4%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P FSP+  ++ Y    D+  L V+LM+      P R+           ++SNG   + S 
Sbjct: 707 PNFSPDGSRLNYQVQSDDATLGVWLMNADGSN-PTRVAPDLGNTNGASWASNGNALVCSF 765

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                +    + L   +   +       + +  +PD  + V+  D      ++     G 
Sbjct: 766 FGSGKLRFIWISLADGSRRVMEEQTRDMLRSHLTPDEKEFVY--DFGSPRNIWKRPVAGG 823

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-AP 395
             ++++  ++ ++F P  S  G+ IA+    G++  I V+ ++G Q+RLL      + A 
Sbjct: 824 PARQLTFGRQRNWF-PELSWDGNWIAYQVTEGDETQIAVIDRNGGQQRLLTSGPGKRFAH 882

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYAS---DPQW 442
           +++   R + ++  ++G     LY ID + G ++ + +  A+ S    P W
Sbjct: 883 SFASDNRRIAYAGFENG--AWNLYWIDRITGEHKQVTHFTAFGSFVRSPAW 931


>gi|163786907|ref|ZP_02181355.1| WD40-like Beta Propeller [Flavobacteriales bacterium ALC-1]
 gi|159878767|gb|EDP72823.1| WD40-like Beta Propeller [Flavobacteriales bacterium ALC-1]
          Length = 368

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 29/195 (14%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++ DI+  DL+ N  ++LTN +  +   + SP   +IVF S R G  +LY M  +GSD K
Sbjct: 153 DSYDIFVADLEGNIVKQLTNEVGYDAEPTVSPKGDKIVFTSTRSGDLELYTMNIDGSDVK 212

Query: 340 RISQD---KEASYFDPVWS--------PQG--------DLIAFTKFSGEKFAIGVMKKDG 380
           +I+ +      ++F P  +        P+         DL+A       +  + +   DG
Sbjct: 213 QITNELGYDGGAFFSPDGTKLIFRSSRPKTEKEIKDYKDLLAEGLVEPTEMELYICNADG 272

Query: 381 SQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTG--SKLYSIDLNGRN-------ETL 430
           S  R L +  N   +P + PSG  ++FS   + + G    LY ID++G+N       ET 
Sbjct: 273 SDLRQLTDLGNANWSPFFHPSGEKILFSSNFEAERGFPFNLYLIDIDGKNLKRVTHGETF 332

Query: 431 INTPAYASDPQWVGF 445
              P ++++ +++ F
Sbjct: 333 DAFPVFSNNGKYLAF 347



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/216 (21%), Positives = 95/216 (43%), Gaps = 30/216 (13%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           K  +  YD  DI    L    + +    +G        P  S  G + + +  +   +++
Sbjct: 146 KYIWPIYDSYDIFVADLEGNIVKQLTNEVG----YDAEPTVSPKGDKIVFTSTRSGDLEL 201

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------------------ 326
           Y++++  +  +++TN L  +  A +SPD ++++F S R   E                  
Sbjct: 202 YTMNIDGSDVKQITNELGYDGGAFFSPDGTKLIFRSSRPKTEKEIKDYKDLLAEGLVEPT 261

Query: 327 --QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEK---FAIGVMKKDG 380
             +LY+  ++GSD ++++    A++  P + P G+ I F + F  E+   F + ++  DG
Sbjct: 262 EMELYICNADGSDLRQLTDLGNANW-SPFFHPSGEKILFSSNFEAERGFPFNLYLIDIDG 320

Query: 381 SQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTG 415
              + +       A P +S +G+ L FS  ++   G
Sbjct: 321 KNLKRVTHGETFDAFPVFSNNGKYLAFSSNRNNGGG 356


>gi|197104555|ref|YP_002129932.1| hypothetical protein PHZ_c1089 [Phenylobacterium zucineum HLK1]
 gi|196477975|gb|ACG77503.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 1107

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 11/137 (8%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +      R+   +   +   +SPD  +I F SDR G + ++VM ++GSD+++++
Sbjct: 109 DIYVMPISGGTPTRIAEGMAWEVQPRFSPDGKRIAFTSDRGGGDNIWVMNADGSDKRQVT 168

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIG---VMKKDGSQERLLVEDSN------ 391
           +++      P WSP G  IA  K   +G     G   +    G     LV+  N      
Sbjct: 169 KEEFRLLNQPAWSPDGRFIAAKKHFTTGRSLGTGEVWLYHVSGGGGVPLVKRPNEQHQKE 228

Query: 392 LQAPTWSPSGRSLIFSR 408
           L  P ++P G+S+ F+R
Sbjct: 229 LGEPIFAPDGKSIYFTR 245



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 12/137 (8%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
           A+ SPD  Q+V+ES      +LYV    G   +R+++  + ++   P WS  G  IAF  
Sbjct: 407 AAVSPDGRQVVYES----LGKLYVKPMAGGAARRLTRGDDGAFELFPAWSRDGRTIAFVS 462

Query: 366 FSGEKFA-IGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           ++      I  +   G   R +       A P +SP GR+++F + + G   ++ +S   
Sbjct: 463 WTDAGLGRIKTVAASGGTARDVTNQPGHYARPQFSPDGRTIVFEKGEGGFLTARAWS--- 519

Query: 424 NGRNETLINTPAYASDP 440
              N  +   PA    P
Sbjct: 520 --ENPGVYRVPASGGTP 534


>gi|115376904|ref|ZP_01464125.1| protein TolB [Stigmatella aurantiaca DW4/3-1]
 gi|310825361|ref|YP_003957719.1| tol-pal system beta propeller repeat protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115366083|gb|EAU65097.1| protein TolB [Stigmatella aurantiaca DW4/3-1]
 gi|309398433|gb|ADO75892.1| Tol-pal system beta propeller repeat protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 349

 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/272 (22%), Positives = 116/272 (42%), Gaps = 14/272 (5%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +L ++  +V+G     + +   DG     L P R +    P +SP+ + +  A  D    
Sbjct: 80  LLVIAARMVNGFHLEQMRLQPLDGGEPVALHPPRARTR-NPSWSPDGRWL-VAESDARSF 137

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             +  ++ +     + +   +     P  S +G+       ++   +IY +        R
Sbjct: 138 SDLVRLEPKAGTQEQPLTQVKEGCFEPAVSPDGREVAFVSSREGDPEIYVMKADGTDERR 197

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---V 353
           +T     +    +SPD   + F S+REG+E+ ++++ +G+  + +S   EA+  D     
Sbjct: 198 ITAFHQEDREPRWSPDGQWLSFISNREGRERYFLVRPDGTSLRAVS--GEATKLDERELA 255

Query: 354 WSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
           WSP    + F  +    K  + V   DG     L +  S   AP WSP G+ L+F  ++ 
Sbjct: 256 WSPDSKKVVFVERLPEAKSRLWVAAVDGGAPVALTDGRSRDDAPAWSPDGKYLVFVAERQ 315

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           GD    L+ +  +G  +T + T   A  P W+
Sbjct: 316 GDV--DLWLMRADGSGQTRLTT---AKGPDWL 342



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 83/164 (50%), Gaps = 9/164 (5%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           VM  DG + R +T +  Q   EPR+SP+ Q +++ + + E   R +L+  R D    R  
Sbjct: 187 VMKADGTDERRIT-AFHQEDREPRWSPDGQWLSFIS-NREGRERYFLV--RPDGTSLRAV 242

Query: 255 NFRSMILAPR---FSSNGKRALISVQKDEAMD-IYSVDLQSNATERLTNTLFINISASYS 310
           +  +  L  R   +S + K+ +   +  EA   ++   +   A   LT+    + + ++S
Sbjct: 243 SGEATKLDERELAWSPDSKKVVFVERLPEAKSRLWVAAVDGGAPVALTDGRSRDDAPAWS 302

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           PD   +VF ++R+G   L++M+++GS Q R++  K   +  P W
Sbjct: 303 PDGKYLVFVAERQGDVDLWLMRADGSGQTRLTTAKGPDWL-PRW 345


>gi|284116165|ref|ZP_06386711.1| WD40 domain protein beta Propeller [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283829531|gb|EFC33885.1| WD40 domain protein beta Propeller [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 279

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 11/151 (7%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEASYFDP 352
           RLT+ L  +    +SP   +I+F SDR+G      LY+M ++GS+ +R+ + KE +   P
Sbjct: 10  RLTHHLARDGGPKWSPSGDRIIFSSDRDGAPGDWDLYLMDADGSNVQRVFK-KEVARTSP 68

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            WSP G  IA++++   K  I +   DG +E  +   S    P WSP G  + F      
Sbjct: 69  TWSPDGKQIAYSRWEQGKSFIYIASIDGKKEERIALGSQ---PAWSPDGTEIAFIEGAPR 125

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           D   ++  +D+  R       P    +P WV
Sbjct: 126 DP-KRISMLDVRMRKHKFFFPP---KEPAWV 152



 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 98/231 (42%), Gaps = 55/231 (23%)

Query: 262 APRFSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            P++S +G R + S  +D A    D+Y +D   +  +R+        S ++SPD  QI +
Sbjct: 20  GPKWSPSGDRIIFSSDRDGAPGDWDLYLMDADGSNVQRVFKKEVARTSPTWSPDGKQIAY 79

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASY----------------------------- 349
               +GK  +Y+   +G  ++RI+   + ++                             
Sbjct: 80  SRWEQGKSFIYIASIDGKKEERIALGSQPAWSPDGTEIAFIEGAPRDPKRISMLDVRMRK 139

Query: 350 ----FDP---------VWSPQGDLIAFTKFS-----GEKF---AIGVMKKDGSQERLLVE 388
               F P          WSP+GD +AF  ++      E F    I ++ +DG+  + ++E
Sbjct: 140 HKFFFPPKEPAWVRHHAWSPEGDRLAFAWYNRIELRQEDFKLETIYIVNRDGTGLQQIIE 199

Query: 389 DSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +      P WSP G +L++S+    D   +++ + L+G     ++ P++ +
Sbjct: 200 EGKRAVEPVWSPRGDALLYSQLDKNDM-QQIFKVTLDGGEPVQLSNPSFPN 249


>gi|87311184|ref|ZP_01093307.1| Periplasmic component of the Tol biopolymer transport system
           [Blastopirellula marina DSM 3645]
 gi|87286092|gb|EAQ78003.1| Periplasmic component of the Tol biopolymer transport system
           [Blastopirellula marina DSM 3645]
          Length = 343

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 4/166 (2%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G R   S   D   DI++ DL+S     LT     +   +Y+ D ++I F SDR+G   
Sbjct: 123 SGTRRRYSWDFDPYTDIFAKDLKSGELTPLTTEKGYDAEGAYNKDGTKIAFCSDRDGDPD 182

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERL 385
           +Y+M ++G++QK+++ D +     P  SP G  I F     E+    I V+  DG  E  
Sbjct: 183 IYIMDADGTNQKQLT-DAKGYDGGPFISPNGKWIVFRSDRKEEGFLQIYVIGVDGQHETA 241

Query: 386 LVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           L ++  +  AP W P+   +I++       G   Y + L    ET+
Sbjct: 242 LTDNVGVNWAPYWHPTEPYIIWAGADHSQPGRPNYDLWLMKYEETV 287



 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 16/175 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-- 322
           ++ +G +      +D   DIY +D      ++LT+    +     SP+   IVF SDR  
Sbjct: 164 YNKDGTKIAFCSDRDGDPDIYIMDADGTNQKQLTDAKGYDGGPFISPNGKWIVFRSDRKE 223

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMK 377
           EG  Q+YV+  +G  +  ++ D     + P W P    I +      +     + + +MK
Sbjct: 224 EGFLQIYVIGVDGQHETALT-DNVGVNWAPYWHPTEPYIIWAGADHSQPGRPNYDLWLMK 282

Query: 378 --------KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                   K G   R+    +    P +SP G+ L+++  +  D  S+L+  D  
Sbjct: 283 YEETVDAIKPGKVWRITDSAAADVLPVFSPDGKQLMWTSTRTDDHSSQLFIADFQ 337


>gi|91204490|emb|CAJ70990.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1003

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 87/188 (46%), Gaps = 26/188 (13%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------- 317
           ++G+    S   DE  DI+S     +  +R+T  L  +   +YSPD S+IV         
Sbjct: 132 ASGENKRFSWDYDEHYDIFSAHRDGSNPKRMTEALGYDAEGAYSPDGSKIVFCSLRDAYP 191

Query: 318 -----------FESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
                      FE+D     ++Y+M ++GS Q R++   +  Y   P +SP G  I +  
Sbjct: 192 IEHLSAGDKKRFETDPSYFGEIYIMNADGSGQTRLTH--QPGYDGGPFFSPDGKRIIWRH 249

Query: 366 F--SGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           F  +G    +  M  DGS +R L +  ++  AP + PS   +IF   K G    +L+ +D
Sbjct: 250 FKENGLLADVYTMNLDGSDKRRLTDFGSMSWAPYYHPSNTYIIFHSNKYGFANCELFIVD 309

Query: 423 LNGRNETL 430
           + G+ E +
Sbjct: 310 VYGKKEPV 317


>gi|148977419|ref|ZP_01814019.1| translocation protein TolB precursor [Vibrionales bacterium SWAT-3]
 gi|145963371|gb|EDK28636.1| translocation protein TolB precursor [Vibrionales bacterium SWAT-3]
          Length = 246

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 29/213 (13%)

Query: 27  FFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDS 86
           F   ++   +    NSA   P++I   ++   + L   VS V++ DLQRS  F+ ++   
Sbjct: 19  FAHAALELVITDGINSAR--PIAIVPFRWEGAEPLPHDVSAVIASDLQRSGKFSPVATSK 76

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV------------- 133
             Q   +   +  F  W +LG   L+TG + K  + +  V ++L D+             
Sbjct: 77  MPQTPYSETEV-NFDAWTNLGVDSLLTGSITKNAEGQYVVNYQLIDIVRGQLTKGQSRAL 135

Query: 134 KDRKQIIGKK---FFSSPAS-----WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
            D  Q++  K    F+  A+      R+ AH ISD +Y+ +TGEKG F +RI +V   VV
Sbjct: 136 SDEGQLVLSKDHVLFNKKATVPGNRLREYAHRISDLVYEELTGEKGAFLTRISYV---VV 192

Query: 186 SGIIK--NSLCVMDRDGANIRYLTPSRDQILFE 216
           +   K    L V D DG N R +  S+  +  +
Sbjct: 193 NDKDKYPYQLRVADYDGFNERLVLRSKQPLCLQ 225


>gi|320104230|ref|YP_004179821.1| WD40-like beta Propeller containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319751512|gb|ADV63272.1| WD40-like beta Propeller containing protein [Isosphaera pallida
           ATCC 43644]
          Length = 327

 Score = 67.8 bits (164), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 9/153 (5%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +++F      NQ+    A  DD D           D  P R+     +   P ++ +G+R
Sbjct: 167 KLVFASTHEGNQEIHWIAWSDDPDA---------PDSQPHRVTRHPGIDTQPCWTPDGQR 217

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +    +   +++   DL+ +  ERLT    I+ S   SPD   I F + REG  +++VM
Sbjct: 218 IVFVTDRWGGLELAITDLEGHRVERLTRQPGIDDSPDVSPDGRWIAFTTFREGMAEVFVM 277

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             +GS+ + +S++ E     P W+P G  + F 
Sbjct: 278 GIDGSNPRNLSRNPEGHDMHPRWTPDGRGVTFC 310



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 109/263 (41%), Gaps = 31/263 (11%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGA------NIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           R+++ S     G I   LC +  D          + L P RD   F+   SP  Q    A
Sbjct: 58  RLIYASMEPDGGSIH--LCQLQVDHPFDATRRQPKRLFPDRDDPEFQAVPSPQSQSPWLA 115

Query: 230 --------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRALISVQK 278
                   T  D D++  + + +   R+   +GN    +     P +S++G + + +   
Sbjct: 116 VTRVTRSGTQGDLDLV-AFDLTSNPPRSRGIMGNVEGRLSHQEWPNWSADGSKLVFASTH 174

Query: 279 DEAMDIYSV------DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +   +I+ +      D   +   R+T    I+    ++PD  +IVF +DR G  +L +  
Sbjct: 175 EGNQEIHWIAWSDDPDAPDSQPHRVTRHPGIDTQPCWTPDGQRIVFVTDRWGGLELAITD 234

Query: 333 SNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             G   +R++  ++    D P  SP G  IAFT F      + VM  DGS  R L  +  
Sbjct: 235 LEGHRVERLT--RQPGIDDSPDVSPDGRWIAFTTFREGMAEVFVMGIDGSNPRNLSRNPE 292

Query: 392 LQ--APTWSPSGRSLIFSRKKDG 412
                P W+P GR + F  ++ G
Sbjct: 293 GHDMHPRWTPDGRGVTFCTQRQG 315



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 112/262 (42%), Gaps = 41/262 (15%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRID-------RAPKRIGNFR-----SMILA 262
           F P +S + +++ YA+ +  D   ++L   ++D       R PKR+   R       + +
Sbjct: 48  FRPVWSADGRRLIYASME-PDGGSIHLCQLQVDHPFDATRRQPKRLFPDRDDPEFQAVPS 106

Query: 263 PRFSSNGKRALISVQKDEA---MDIYSVDLQSNATE----------RLTNTLFINISASY 309
           P+ S +   A+  V +      +D+ + DL SN             RL++  + N SA  
Sbjct: 107 PQ-SQSPWLAVTRVTRSGTQGDLDLVAFDLTSNPPRSRGIMGNVEGRLSHQEWPNWSA-- 163

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-----DPVWSPQGDLIAFT 364
             D S++VF S  EG ++++ +  +       SQ    +        P W+P G  I F 
Sbjct: 164 --DGSKLVFASTHEGNQEIHWIAWSDDPDAPDSQPHRVTRHPGIDTQPCWTPDGQRIVFV 221

Query: 365 KFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   + +   +G + ERL  +     +P  SP GR + F+  ++G   ++++ + +
Sbjct: 222 TDRWGGLELAITDLEGHRVERLTRQPGIDDSPDVSPDGRWIAFTTFREG--MAEVFVMGI 279

Query: 424 NGRNETLI--NTPAYASDPQWV 443
           +G N   +  N   +   P+W 
Sbjct: 280 DGSNPRNLSRNPEGHDMHPRWT 301


>gi|163788034|ref|ZP_02182480.1| WD40-like repeat/amidohydrolase domain protein [Flavobacteriales
           bacterium ALC-1]
 gi|159876354|gb|EDP70412.1| WD40-like repeat/amidohydrolase domain protein [Flavobacteriales
           bacterium ALC-1]
          Length = 1130

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 2/138 (1%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++  D   D+Y++ +      R+T  +  ++   YSPD   I+F SD+ G + L+ M   
Sbjct: 67  TIMFDMMGDLYTIPIAGGKATRITEGMPYDVHPRYSPDGKSILFISDKSGSDNLWTMDLA 126

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNL 392
             +QK++++DK   +    WSP GD I  T+         V K  GS   LL +   S  
Sbjct: 127 SKEQKQLTKDKNKYHVSASWSPDGDYIVGTRGRRNIKPFIVHKDGGSGANLLSKQKASKF 186

Query: 393 QAPTWSPSGRSLIFSRKK 410
             P +S  G+ + FS ++
Sbjct: 187 IDPAFSADGKHIYFSARR 204



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 46/88 (52%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +Y +DL S   +RLTN  F     ++SPD +QIVF + +     LY + ++G        
Sbjct: 377 LYVMDLPSGTPKRLTNHNFTEAMPAWSPDGTQIVFTTWKPDGGHLYKVNASGRGNATQLT 436

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            +   Y +P WS + + IAFTK + + +
Sbjct: 437 KERGIYTNPAWSYKSNRIAFTKGAAQTY 464



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 10/165 (6%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFE 319
           + PR+S +GK  L    K  + +++++DL S   ++LT +    ++SAS+SPD   IV  
Sbjct: 97  VHPRYSPDGKSILFISDKSGSDNLWTMDLASKEQKQLTKDKNKYHVSASWSPDGDYIVGT 156

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---------EK 370
             R   +   V +  GS    +S+ K + + DP +S  G  I F+   G         + 
Sbjct: 157 RGRRNIKPFIVHKDGGSGANLLSKQKASKFIDPAFSADGKHIYFSARRGAWNYNAQLPQY 216

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             +   ++D + E +     +   PT S  G+ +++  + +  TG
Sbjct: 217 QIMSFNREDAATETVTSRYGSAFTPTLSKDGKWMVYGSRFEEHTG 261



 Score = 37.4 bits (85), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 9/91 (9%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           SP G  IAFT  +     + VM    G+ +RL   +     P WSP G  ++F+  K   
Sbjct: 363 SPDGSQIAFTALN----RLYVMDLPSGTPKRLTNHNFTEAMPAWSPDGTQIVFTTWK--P 416

Query: 414 TGSKLYSIDLNGRNET--LINTPAYASDPQW 442
            G  LY ++ +GR     L       ++P W
Sbjct: 417 DGGHLYKVNASGRGNATQLTKERGIYTNPAW 447


>gi|320161659|ref|YP_004174884.1| putative protein kinase [Anaerolinea thermophila UNI-1]
 gi|319995513|dbj|BAJ64284.1| putative protein kinase [Anaerolinea thermophila UNI-1]
          Length = 710

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 32/292 (10%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   S I FVSE   +G ++  + +M  DG N+R LT  R+    +P +SP+  K+A+ +
Sbjct: 426 GGGASEIAFVSER--TGQMQ--IWMMSADGKNLRQLTNMRNGAC-QPAWSPDGSKLAFIS 480

Query: 231 --------YDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEA 281
                   Y+   I  + +  +     P    G+F      P +S +GK+   +  +   
Sbjct: 481 PCPGKREIYEGSAIYLLAMDGSEPIPLPSSPEGDFD-----PAWSPDGKKLAFTSLRTGR 535

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             I+ +DLQ+     ++ + + ++  S+SP S QI F   R    Q+++M  +G +Q R 
Sbjct: 536 PSIFVMDLQTLVAREISESRYSDLQPSWSPISRQIAF-VRRISNSQIWIMSEDGENQVRF 594

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKF-SGEKFA--IGVMKKDGSQERLL-------VEDSN 391
           S   + + F P WS  G  I + +   G K    +G+  +D    R         V+   
Sbjct: 595 SPPGDVTNFFPTWSWDGQAILYNQIVGGSKVPRLVGMRYEDRQSPREFRIPASGTVDIGP 654

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQW 442
           + + T SP G  + +    DG T   +Y + +NG  N  L   P++   P W
Sbjct: 655 VGSFTLSPDGFWVAYEGWPDG-TNHDIYLMTMNGATNIRLTTDPSFDYSPVW 705


>gi|310817396|ref|YP_003949754.1| amidohydrolase [Stigmatella aurantiaca DW4/3-1]
 gi|309390468|gb|ADO67927.1| Amidohydrolase [Stigmatella aurantiaca DW4/3-1]
          Length = 1093

 Score = 67.8 bits (164), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 12/154 (7%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y++ +     + LT     ++   YSPD + I F SDR G + L++M+ +GSD + ++
Sbjct: 77  DLYTLPIAGGEAKALTTGAAWDMQPRYSPDGASIAFTSDRGGGDNLWIMKRDGSDSRPVT 136

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFSGEK-FAIGVM---KKDGSQERLLVEDSNLQ---- 393
           Q+       P WSP    L+A   FS  +    G M    + G +   L E  N Q    
Sbjct: 137 QESFRLLNSPTWSPDSQYLVARKHFSSRRSLGAGEMWLYHRAGGEGVQLTERPNDQKDAG 196

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKL-YSIDLNGR 426
            P +SP GR L FS  +D   G    Y+ D NG+
Sbjct: 197 EPAFSPDGRFLYFS--QDTTPGKVFEYNKDPNGQ 228



 Score = 40.0 bits (92), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 20/182 (10%)

Query: 284 IYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +Y+ +L      RLT  T    +  S+S D   IV+ +  + K     + S G  + ++ 
Sbjct: 392 LYTRELPDGLPRRLTKQTEHFEMHPSFSRDGKSIVYTTWDDDKLGTVRVVSAGGGEGKVV 451

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG---------VMKKDGSQERLLVEDSNLQ 393
             +   Y +P +SP G  I +    G     G         V+ KDG   R L +D   +
Sbjct: 452 SAQPGFYLEPAFSPDGRSIVYRASGGGYLLPGLYSRDPGLYVVGKDGGTPRRLSKDG--E 509

Query: 394 APTWSPSGRSLIFSRKKDGDTGSK--LYSIDLNGR------NETLINTPAYASDPQWVGF 445
            P +      + F   + G+   K  L SI L+G           ++T   + D +WV F
Sbjct: 510 QPHFGAGSDRVYFLAVEGGEKEDKRELRSIGLDGTAPRTHLTSAEVSTYRVSPDERWVAF 569

Query: 446 MD 447
            +
Sbjct: 570 QE 571



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 24/185 (12%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIV-- 317
           + PR+S +G     +  +    +++ +    + +  +T   F  + S ++SPDS  +V  
Sbjct: 99  MQPRYSPDGASIAFTSDRGGGDNLWIMKRDGSDSRPVTQESFRLLNSPTWSPDSQYLVAR 158

Query: 318 --FESDRE-GKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             F S R  G  ++++    G +  ++++  + +    +P +SP G  + F++ +     
Sbjct: 159 KHFSSRRSLGAGEMWLYHRAGGEGVQLTERPNDQKDAGEPAFSPDGRFLYFSQDTTPGKV 218

Query: 373 IGVMKKDGSQ----ERLLVEDSNLQA----------PTWSPSGRSLIFSRKKDGDTGSKL 418
               K    Q    +RL +E   L+           PT SP G+SL F R+  G   S L
Sbjct: 219 FEYNKDPNGQIYVIQRLNLETKELEPFITGPGGSVRPTPSPDGKSLAFVRRVRGK--SVL 276

Query: 419 YSIDL 423
           +S DL
Sbjct: 277 FSADL 281


>gi|226225576|ref|YP_002759682.1| hypothetical protein GAU_0170 [Gemmatimonas aurantiaca T-27]
 gi|226088767|dbj|BAH37212.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 380

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 91/192 (47%), Gaps = 30/192 (15%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+ N+         S +GKR + +  KD  +DIY++++     +RLT T   +    +SP
Sbjct: 181 RLTNYGVYTAEGVLSPDGKRIVFTSLKDGDLDIYTMNVDGTDVKRLTTTPGYDGGPWWSP 240

Query: 312 DSSQIVF-------ESD-------------REGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           D ++IV+       ++D             R  K +L+VM ++GSDQ++I++   A+ F 
Sbjct: 241 DGTKIVYRAWHYDNDTDLKAYQELLKQNMIRPNKMELFVMNADGSDQRQITKLGGAN-FG 299

Query: 352 PVWSPQGDLIAFTKFS----GEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIF 406
           P W+P G  + F+          F + ++  DG+    +  +      P +SP G  LI+
Sbjct: 300 PSWTPDGQRVIFSSNHKNPRSRNFDLYIVGLDGNNLEQVTTNGEFDGFPMFSPDGTKLIW 359

Query: 407 SRK----KDGDT 414
           +      K+GDT
Sbjct: 360 ASNRGAAKEGDT 371



 Score = 65.1 bits (157), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 74/174 (42%), Gaps = 24/174 (13%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+ D       RLTN          SPD  +IVF S ++G   +Y M  +G+D KR++
Sbjct: 168 DIYTADRDGQNLTRLTNYGVYTAEGVLSPDGKRIVFTSLKDGDLDIYTMNVDGTDVKRLT 227

Query: 343 QDKEASYFDPVWSPQG--------------DLIAFTKFSGE------KFAIGVMKKDGSQ 382
                    P WSP G              DL A+ +   +      K  + VM  DGS 
Sbjct: 228 T-TPGYDGGPWWSPDGTKIVYRAWHYDNDTDLKAYQELLKQNMIRPNKMELFVMNADGSD 286

Query: 383 ERLLVEDSNLQ-APTWSPSGRSLIFS--RKKDGDTGSKLYSIDLNGRNETLINT 433
           +R + +       P+W+P G+ +IFS   K        LY + L+G N   + T
Sbjct: 287 QRQITKLGGANFGPSWTPDGQRVIFSSNHKNPRSRNFDLYIVGLDGNNLEQVTT 340



 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 23/160 (14%)

Query: 304 NISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEAS--YF--------- 350
           N  A +S D   + F+S R+G+  +Q YVM+ +G+   ++S   + +  +F         
Sbjct: 81  NAEAYFSQDGQWLTFQSTRDGRACDQQYVMRVDGTGLTKVSVGGKTTCGWFLPGGNKLFF 140

Query: 351 ------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRS 403
                 D    P+ D      +  +K+ I    +DG    RL            SP G+ 
Sbjct: 141 ASTHAADSACPPRPDPSKGYVWGIDKYDIYTADRDGQNLTRLTNYGVYTAEGVLSPDGKR 200

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQW 442
           ++F+  KDGD    +Y+++++G + + L  TP Y   P W
Sbjct: 201 IVFTSLKDGDL--DIYTMNVDGTDVKRLTTTPGYDGGPWW 238


>gi|320104802|ref|YP_004180393.1| peptidase S41 [Isosphaera pallida ATCC 43644]
 gi|319752084|gb|ADV63844.1| peptidase S41 [Isosphaera pallida ATCC 43644]
          Length = 1186

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 128/276 (46%), Gaps = 44/276 (15%)

Query: 152 RKIAHTI---------SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           + IAHT+         +DD     +   G FN   +  + + V  + +++         +
Sbjct: 254 KPIAHTVRTERDPMWFADDTLAFNSDRSGTFNLYKVDPATNEVVPLTRSTTW-------D 306

Query: 203 IRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRS 258
           +R+ + S D +I++E  F    + V  ++ +D   L + + D  + R P+R+   G    
Sbjct: 307 VRWPSQSNDGRIVYE--FDGTLRIVTVSSGEDRG-LTIEVPDDGLTRRPERVSAAGLIED 363

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIV 317
             L+P+    G+RAL + + +    +++V +++  T  L N+  ++  A  +SPD S I 
Sbjct: 364 FGLSPK----GERALFAARGE----VFTVPIENGTTRALVNSSKVHAKAPIWSPDGSTIA 415

Query: 318 FESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           + SD  G+E+L+++  +GS   R ++    A  F P WSP G  IAF    G+     V 
Sbjct: 416 YLSDASGEEELWLVAQDGSKPPRQLTHGGRAMRFAPRWSPDGSAIAFVDKDGKLLVADVA 475

Query: 377 KKDGSQERLLVE--DSNLQAPT---WSPSGRSLIFS 407
             +      LVE  DS  +  T   WSP  R L FS
Sbjct: 476 TGN------LVEAADSPEERSTDHVWSPDSRFLAFS 505



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 76/188 (40%), Gaps = 30/188 (15%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D++SV  Q     RLT    + +   +SPD S I F    +G EQ+YV+ + G   K+
Sbjct: 85  AGDLWSVSDQGGRATRLTAHPGLELFPKFSPDGSMIAFTGQYDGDEQVYVIPATGGVPKQ 144

Query: 341 ISQ-------DKEASYFDPV--WSPQGDLIAF-------TKFSGEKFAIGVMKKDGSQER 384
           ++             Y   V  W+P G  I F       T   G  + + V    G   +
Sbjct: 145 LTYYPARGPLPARWGYDHQVMGWTPDGKSILFRSLRDSWTIAEGRLYTVPV---GGGPAK 201

Query: 385 LLVEDSNLQAPTWSPSGRSLIFS---------RKKDGDTGSKLYSIDLNG-RNETLINTP 434
           LL   S+  A T+SP G  L +S         ++  G     L+ IDL     + + +T 
Sbjct: 202 LLPPPSSGAA-TFSPDGSRLFYSPLARDFRTWKRYQGGWAQNLFIIDLKTLERKPIAHTV 260

Query: 435 AYASDPQW 442
               DP W
Sbjct: 261 RTERDPMW 268



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 8/152 (5%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALIS 275
           P +SP+   +AY + D      ++L+     + P+++ +  R+M  APR+S +G  A+  
Sbjct: 405 PIWSPDGSTIAYLS-DASGEEELWLVAQDGSKPPRQLTHGGRAMRFAPRWSPDGS-AIAF 462

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSN 334
           V KD  + +  V    N  E   +    +    +SPDS  + F   R  G   L++   +
Sbjct: 463 VDKDGKLLVADV-ATGNLVEAADSPEERSTDHVWSPDSRFLAFSLPRPNGNRALFIWSRD 521

Query: 335 GSDQKRISQDKEASYFD---PVWSPQGDLIAF 363
             + +   Q     +FD   P W P+G+ + +
Sbjct: 522 AENPEAALQQITDEFFDAFEPAWDPEGNYLYY 553


>gi|218258596|ref|ZP_03474939.1| hypothetical protein PRABACTJOHN_00594 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225366|gb|EEC98016.1| hypothetical protein PRABACTJOHN_00594 [Parabacteroides johnsonii
           DSM 18315]
          Length = 302

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 9/181 (4%)

Query: 265 FSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            +++GK+  IS   ++D    IY++ +Q   T RL   +  +    +SPD  Q+ + +DR
Sbjct: 90  IAADGKQIAISHGTKEDGKSRIYTLPMQG-GTPRLITPIAPSYLHGWSPDGRQLAYCADR 148

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G   +YV+   G ++ R++   E     P +SP G+ I F         +  MKKDGS+
Sbjct: 149 KGNYDIYVIPVEGGEEIRLTT-AEGLDDGPEYSPCGEYIWFNSVRTGLMQVWRMKKDGSE 207

Query: 383 ERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           +  +   E  N   P  SP G+S+IF     GD   + +   L  +N  L   PA   +P
Sbjct: 208 QTQMTFDETRNSWFPHISPDGKSVIFITYYKGDLEPEQH---LPNKNVELRIMPATGGEP 264

Query: 441 Q 441
           +
Sbjct: 265 K 265



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 20/183 (10%)

Query: 244 TRIDRAPKRIGNFRSMI-LAPRF----SSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +RI   P + G  R +  +AP +    S +G++      +    DIY + ++     RLT
Sbjct: 109 SRIYTLPMQGGTPRLITPIAPSYLHGWSPDGRQLAYCADRKGNYDIYVIPVEGGEEIRLT 168

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               ++    YSP    I F S R G  Q++ M+ +GS+Q +++ D+  + + P  SP G
Sbjct: 169 TAEGLDDGPEYSPCGEYIWFNSVRTGLMQVWRMKKDGSEQTQMTFDETRNSWFPHISPDG 228

Query: 359 DLIAF-TKFSGE----------KFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRS 403
             + F T + G+             + +M   G + + LV+       +   +W+P  R 
Sbjct: 229 KSVIFITYYKGDLEPEQHLPNKNVELRIMPATGGEPKTLVKLFGGQGTINVNSWAPDSRR 288

Query: 404 LIF 406
           + F
Sbjct: 289 VAF 291


>gi|115380583|ref|ZP_01467536.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
 gi|115362407|gb|EAU61689.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
          Length = 655

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 74/154 (48%), Gaps = 12/154 (7%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y++ +     + LT     ++   YSPD + I F SDR G + L++M+ +GSD + ++
Sbjct: 65  DLYTLPIAGGEAKALTTGAAWDMQPRYSPDGASIAFTSDRGGGDNLWIMKRDGSDSRPVT 124

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFSGEK-FAIGVM---KKDGSQERLLVEDSNLQ---- 393
           Q+       P WSP    L+A   FS  +    G M    + G +   L E  N Q    
Sbjct: 125 QESFRLLNSPTWSPDSQYLVARKHFSSRRSLGAGEMWLYHRAGGEGVQLTERPNDQKDAG 184

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKL-YSIDLNGR 426
            P +SP GR L FS  +D   G    Y+ D NG+
Sbjct: 185 EPAFSPDGRFLYFS--QDTTPGKVFEYNKDPNGQ 216



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 72/182 (39%), Gaps = 20/182 (10%)

Query: 284 IYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +Y+ +L      RLT  T    +  S+S D   IV+ +  + K     + S G  + ++ 
Sbjct: 380 LYTRELPDGLPRRLTKQTEHFEMHPSFSRDGKSIVYTTWDDDKLGTVRVVSAGGGEGKVV 439

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG---------VMKKDGSQERLLVEDSNLQ 393
             +   Y +P +SP G  I +    G     G         V+ KDG   R L +D   +
Sbjct: 440 SAQPGFYLEPAFSPDGRSIVYRASGGGYLLPGLYSRDPGLYVVGKDGGTPRRLSKDG--E 497

Query: 394 APTWSPSGRSLIFSRKKDGDTGSK--LYSIDLNGR------NETLINTPAYASDPQWVGF 445
            P +      + F   + G+   K  L SI L+G           ++T   + D +WV F
Sbjct: 498 QPHFGAGSDRVYFLAVEGGEKEDKRELRSIGLDGTAPRTHLTSAEVSTYRVSPDERWVAF 557

Query: 446 MD 447
            +
Sbjct: 558 QE 559


>gi|149921634|ref|ZP_01910083.1| WD40-like repeat/amidohydrolase domain protein [Plesiocystis
           pacifica SIR-1]
 gi|149817478|gb|EDM76948.1| WD40-like repeat/amidohydrolase domain protein [Plesiocystis
           pacifica SIR-1]
          Length = 1128

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 84/180 (46%), Gaps = 22/180 (12%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-I 341
           D+YS+ +     + LT  +  ++   +SPD   + F SDR G + L+VM ++GSD+ R +
Sbjct: 67  DLYSLPMAGGEAKALTEGVAWDMQPRFSPDGQWLAFTSDRGGGDNLWVMPADGSDEPRPV 126

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-----VMKKDGSQERLL----VEDSNL 392
           + +       P WSP G+ +   K    + +IG     +  + G +   L     E  + 
Sbjct: 127 TSESFRLITAPAWSPDGEYLVGRKHFTSRRSIGSGEMWLYHRSGGKGVQLTKKRTEQKDS 186

Query: 393 QAPTWSPSGRSLIFSR--------KKDGDTGSKLYSI---DL-NGRNETLINTPAYASDP 440
             P +SP GR L FS         + + D   ++Y+I   DL  GR E+++  P  A  P
Sbjct: 187 GEPVFSPDGRYLYFSEDMTPGGVFEYNKDPNGQIYAIRRLDLEEGRLESIVGGPGGAVRP 246


>gi|329943315|ref|ZP_08292089.1| WD40-like Beta Propeller Repeat family protein [Chlamydophila
           psittaci Cal10]
 gi|332287891|ref|YP_004422792.1| putative translocation protein tolB [Chlamydophila psittaci 6BC]
 gi|313848463|emb|CBY17467.1| putative TolB protein [Chlamydophila psittaci RD1]
 gi|325506662|gb|ADZ18300.1| putative translocation protein tolB [Chlamydophila psittaci 6BC]
 gi|328814862|gb|EGF84852.1| WD40-like Beta Propeller Repeat family protein [Chlamydophila
           psittaci Cal10]
 gi|328915155|gb|AEB55988.1| tolB protein, putative [Chlamydophila psittaci 6BC]
          Length = 427

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 137/312 (43%), Gaps = 18/312 (5%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILF-VSESVVSGIIKNS-LCVMDRDGANIRYL 206
           AS R+  H  +D I+ ++T   G  + +I+F +S++     +K   L  +D DG N+R L
Sbjct: 119 ASNRQKIHEAADKIHYALTSVPGISSGKIIFSLSKNPKDSELKQGELWSVDYDGGNLRPL 178

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T   + +   P +     K  Y     +  +    + +  +   K++ + +     P FS
Sbjct: 179 T-QENSLSITPNWMNIGSKNPYLYVSYKFGIPKIFLGSLENTTGKKVLHLQGNQFMPAFS 237

Query: 267 SNGKRALISVQKDEAMD----IYSVDLQSNATER----LTNTLFINISASYSPDSSQIVF 318
              K+ L++   D   +    + S  L   A  +    L  T     + S+SPD S++VF
Sbjct: 238 P--KKKLLAFISDSYGNPDLFLQSFSLSKGAMGKPRRVLNETFGTQGNPSFSPDGSKLVF 295

Query: 319 ESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVM 376
            S+++G+ +LY++Q +   Q  R+   K  +   P WSP G  IAF     G +      
Sbjct: 296 VSNKDGRPRLYILQIDPEIQSPRLLTKKYRNSSCPSWSPDGKKIAFCSVIKGVRQICLYD 355

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPA 435
              G   +L     + + P+W+   + L++S    G+  S+LY + L   + + ++    
Sbjct: 356 LATGKDYQLTTTPVDKEGPSWAVDSQHLVYSAGNSGE--SELYLLSLITQKTKKIVIGLG 413

Query: 436 YASDPQWVGFMD 447
               P W GF D
Sbjct: 414 EKRFPSWGGFPD 425


>gi|182416392|ref|YP_001821458.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Opitutus terrae PB90-1]
 gi|177843606|gb|ACB77858.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Opitutus terrae PB90-1]
          Length = 410

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 120/276 (43%), Gaps = 18/276 (6%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQS-ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           +  + FS   + + + H     + Q+   G KG F +++ F+ E       K  +   D 
Sbjct: 111 VASQVFSGANARQALLHAADFAVEQTNGMGLKGFFTAQLAFIGERTG----KKEVYTADL 166

Query: 199 DGANIRYLTPSRDQIL-FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
                + +T  RD  L   PR++P+  ++ Y ++       ++ +D    +    + +F+
Sbjct: 167 FFGGAKQIT--RDNALALMPRWAPDGNRLLYTSFFKSGFPDIFQIDLSTYQRTTFV-SFK 223

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                 RFS NG++  + +  +   +IY  + Q     R T +  +  S  +SPD S+IV
Sbjct: 224 GTNSGARFSPNGQQVAMVLSGEGTPEIYLSNAQGRQVSRKTRSDAVKSSPCFSPDGSRIV 283

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVM 376
           F    E   QLYVM   G    RI+        +P WS    + IAFT  +G  + IGV+
Sbjct: 284 FA--MEPGPQLYVMSVAGGVPSRITSGISRYCAEPDWSRANPNKIAFTMRAG-GYQIGVL 340

Query: 377 ---KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               + G+Q      D     P+W   GR L+++ +
Sbjct: 341 DLSTRKGAQVSKAPFDG--IEPSWLADGRHLVYTAR 374


>gi|302866980|ref|YP_003835617.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Micromonospora aurantiaca ATCC 27029]
 gi|315506582|ref|YP_004085469.1| peptidase s9b dipeptidylpeptidase iv domain protein [Micromonospora
           sp. L5]
 gi|302569839|gb|ADL46041.1| peptidase S9B dipeptidylpeptidase IV domain protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315413201|gb|ADU11318.1| peptidase S9B dipeptidylpeptidase IV domain protein [Micromonospora
           sp. L5]
          Length = 590

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 74/143 (51%), Gaps = 4/143 (2%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +G R + S +++ +++++  DL++   ++ T     +I A +SPD+ Q+ F S R G
Sbjct: 35  ISPDGTRFVASSKRNGSVNLWFFDLRTGKWQQGTWGTGDDIEAQWSPDNEQLAFTSSRGG 94

Query: 325 KEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQ 382
            + +++ + S+G  ++  S   E  Y  P WSP G  +A+     G +  + V    G+ 
Sbjct: 95  HKAIWLYRLSDGQTRQLTSAGHEEEY--PSWSPDGRTVAYVGGPWGRRHFLVVSADGGAP 152

Query: 383 ERLLVEDSNLQAPTWSPSGRSLI 405
            R+  E     A +W+P GR L+
Sbjct: 153 RRVTTEPGRAGACSWAPDGRWLV 175



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 20/199 (10%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P ++ +G         DE   I   D ++ A   L         AS++PD  +IV+ ++ 
Sbjct: 253 PTWTRDGNHLFFHRLVDEGAGIAVWDRRTKAVRELVPAEEKPRYASFAPDGRRIVYGTEA 312

Query: 323 EGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMKKD 379
           +G+  L ++  + G  Q   +   EA++  P WSP G  I  A       ++ I  +   
Sbjct: 313 DGRSALRILDLATGVSQPVPA--GEAAF--PSWSPDGRTIACALRPDPTSRWEIATVDVA 368

Query: 380 GSQERLLVEDSN----LQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLI-- 431
           G Q R+   D +    L AP +++P GR L+F R +     + L  +DL+ GR   L   
Sbjct: 369 GGQPRVWTADRDDLRGLHAPVSFAPDGRRLVF-RSETEPFEANLLVLDLDSGRITNLTED 427

Query: 432 ----NTPAYASDPQWVGFM 446
                 PA+  D + V FM
Sbjct: 428 SWWDEAPAFTPDGRGVVFM 446



 Score = 40.4 bits (93), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 2/134 (1%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V     A  R+T       + S++PD   +V  S   G   ++++ S   +   ++ D  
Sbjct: 145 VSADGGAPRRVTTEPGRAGACSWAPDGRWLVCHSYDTGAGAVWLLDSRTGEAIPVT-DGS 203

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +  + P   P    +AF++    +  I V +  DG    L+V  ++ + PTW+  G  L 
Sbjct: 204 SWDYKPTICPTRPAVAFSRSDEGRSVIWVQRLADGVGRPLVVTGADDRWPTWTRDGNHLF 263

Query: 406 FSRKKDGDTGSKLY 419
           F R  D   G  ++
Sbjct: 264 FHRLVDEGAGIAVW 277



 Score = 40.4 bits (93), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 10/105 (9%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRI---SQDKEASYFDPVWSPQGDLIA 362
            + SPD ++ V  S R G   L+      G  Q+       D EA      WSP  + +A
Sbjct: 33  GAISPDGTRFVASSKRNGSVNLWFFDLRTGKWQQGTWGTGDDIEAQ-----WSPDNEQLA 87

Query: 363 FTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           FT   G   AI + +  DG   +L       + P+WSP GR++ +
Sbjct: 88  FTSSRGGHKAIWLYRLSDGQTRQLTSAGHEEEYPSWSPDGRTVAY 132


>gi|262193783|ref|YP_003264992.1| amidohydrolase [Haliangium ochraceum DSM 14365]
 gi|262077130|gb|ACY13099.1| amidohydrolase [Haliangium ochraceum DSM 14365]
          Length = 1138

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 29/208 (13%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           G + S+ L+P    +GK  +     D   D+Y++ +     + LT+ +  ++   YSPD 
Sbjct: 88  GTWMSLDLSP----DGKEIVF----DMLGDLYTLPIAGGEAKPLTSGIAWDMQPRYSPDG 139

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             I F SDR G + L+++   G + +++S +       P W+P G  +   K    + ++
Sbjct: 140 RFIAFTSDRGGGDNLWIIDRQGENPRQVSSENFRLVNSPAWTPDGQFLVGRKHFTSRRSL 199

Query: 374 GVMKK-----DGSQERLLVEDSNLQ----APTWSPSGRSLIFSR--------KKDGDTGS 416
           G  +       G Q   L E  N Q     P +SP GR L FS+        + + D  +
Sbjct: 200 GAGEMWLYHIAGGQGVQLTEKQNEQKDTGEPVFSPDGRYLYFSQDSTPGPVFEYNKDPHA 259

Query: 417 KLYSI----DLNGRNETLINTPAYASDP 440
            +YSI       G  ETLI+ P  A  P
Sbjct: 260 GIYSIYRLDREEGHLETLISGPGGAVRP 287



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/180 (22%), Positives = 79/180 (43%), Gaps = 15/180 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA---PKRIGNFRSMI 260
           R LT   D   F P FS + + + Y  + DE +  V ++  R  R+     + G++   +
Sbjct: 441 RRLTRDDDVFEFYPSFSRDGRSIVYVAWSDERLGSVRMIARRGGRSRTLTSQPGHYVEPV 500

Query: 261 LAPR-----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           L+P      +   G  ++ +        +Y++ L     ER++ +     S  +  D  +
Sbjct: 501 LSPDGKHLVYRKVGASSVRAQSYTHDTGLYALSLAGGEPERISRS---GNSPHFGGDGKR 557

Query: 316 IVF-ESDREGKEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           + F +++  G  Q + ++S G D K  R+    +A+    V SP G  +AF +++    A
Sbjct: 558 VFFLDTEGGGSAQKFQLESVGIDGKDERVHLRSDAALEYAV-SPDGRWVAFQEYAAAYVA 616


>gi|159901044|ref|YP_001547291.1| serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159894083|gb|ABX07163.1| serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 642

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 102/199 (51%), Gaps = 18/199 (9%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +A R  S+G R   S   D    I+++    +  ++LT+    + +  +SPD S+I FES
Sbjct: 413 IASRRRSDG-RVAYSHGVDGLEQIFTISANGSDEQQLTSAPGESRAPRWSPDGSKIAFES 471

Query: 321 DREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           DR+        +Y+M ++GS+ +R++ +       P WSP G  +AF   +   + I V+
Sbjct: 472 DRDHSNNNSFDIYIMDADGSNVQRVTAEG-GWQGGPAWSPDGTKLAFHSQTSGLYEIVVL 530

Query: 377 KKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG---RNETLI 431
               +++ LL  V+DS   A  WSP G+++ F    D D+ +K+Y++  +G   R  T +
Sbjct: 531 DLTTNKQYLLASVDDSAFWA-DWSPDGQTIAF-MTGDNDSRTKIYTVPTSGGEPRELTNL 588

Query: 432 NT-----PAYASDPQWVGF 445
            T     P ++ D +++ F
Sbjct: 589 GTGKNRWPRWSPDGRYLAF 607



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 63/137 (45%), Gaps = 6/137 (4%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A ++ S+D+ + A   +      N  AS      ++ +    +G EQ++ + +NGSD+++
Sbjct: 388 AYNLLSLDIPTGAVSEVVPHHDDNAIASRRRSDGRVAYSHGVDGLEQIFTISANGSDEQQ 447

Query: 341 ISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAP 395
           ++     S   P WSP G  IAF       +   F I +M  DGS  +R+  E      P
Sbjct: 448 LTSAPGESRA-PRWSPDGSKIAFESDRDHSNNNSFDIYIMDADGSNVQRVTAEGGWQGGP 506

Query: 396 TWSPSGRSLIFSRKKDG 412
            WSP G  L F  +  G
Sbjct: 507 AWSPDGTKLAFHSQTSG 523



 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 85/192 (44%), Gaps = 17/192 (8%)

Query: 262 APRFSSNGKRALISVQKDEA----MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           APR+S +G +      +D +     DIY +D   +  +R+T         ++SPD +++ 
Sbjct: 457 APRWSPDGSKIAFESDRDHSNNNSFDIYIMDADGSNVQRVTAEGGWQGGPAWSPDGTKLA 516

Query: 318 FESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGV 375
           F S   G  ++ V+    + Q  + S D  A + D  WSP G  IAF T  +  +  I  
Sbjct: 517 FHSQTSGLYEIVVLDLTTNKQYLLASVDDSAFWAD--WSPDGQTIAFMTGDNDSRTKIYT 574

Query: 376 MKKDGSQERLLVEDSNL-----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +   G + R L   +NL     + P WSP GR L F   ++   G  L  +   G+ E L
Sbjct: 575 VPTSGGEPREL---TNLGTGKNRWPRWSPDGRYLAFESYRNDHWGIYLQHL-ATGKVEAL 630

Query: 431 INTPAYASDPQW 442
            +   +   P W
Sbjct: 631 SDGTRHDRWPSW 642



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 5/161 (3%)

Query: 217 PRFSPNQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           PR+SP+  K+A+ +   + + +   +Y+MD       +R+         P +S +G +  
Sbjct: 458 PRWSPDGSKIAFESDRDHSNNNSFDIYIMDADGSNV-QRVTAEGGWQGGPAWSPDGTKLA 516

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQ 332
              Q     +I  +DL +N    L +       A +SPD   I F + D + + ++Y + 
Sbjct: 517 FHSQTSGLYEIVVLDLTTNKQYLLASVDDSAFWADWSPDGQTIAFMTGDNDSRTKIYTVP 576

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           ++G + + ++         P WSP G  +AF  +  + + I
Sbjct: 577 TSGGEPRELTNLGTGKNRWPRWSPDGRYLAFESYRNDHWGI 617


>gi|86133597|ref|ZP_01052179.1| WD40-like repeat/amidohydrolase domain protein [Polaribacter sp.
           MED152]
 gi|85820460|gb|EAQ41607.1| WD40-like repeat/amidohydrolase domain protein [Polaribacter sp.
           MED152]
          Length = 1127

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 68/133 (51%), Gaps = 4/133 (3%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y++        R+T+ L ++   +YSPD   I F SDR G + ++++     + ++++
Sbjct: 73  DLYTIPFSGGKATRITDGLALDTKPNYSPDGKSIAFASDRSGNDNVWILNLETKETRQVT 132

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQA--PTWSP 399
           +DK  +     WSP G+ I   K       + +  KD GS  +L+ E ++L+   P +SP
Sbjct: 133 KDKRGAVESVAWSPDGEYIVAAK-GKRNLKLHLYHKDAGSGTQLIKEPASLKTVEPVFSP 191

Query: 400 SGRSLIFSRKKDG 412
             + + +S +  G
Sbjct: 192 DNKYIYYSSRTGG 204



 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 5/92 (5%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           P  SP G  I F   +  K  I +   DG  +RL   D N   P WSP+G+ ++++   +
Sbjct: 358 PKTSPDGKHIVFNALN--KLYI-MQLPDGKPKRLTKMDVNEMQPNWSPNGKEIVYTTWSE 414

Query: 412 GDTGSKLYSIDL-NGRNETLINTPAYASDPQW 442
            D G  LY ++   G+   L NT A  + P W
Sbjct: 415 KD-GGHLYKVNAKGGKPIKLTNTSALYNTPVW 445



 Score = 44.3 bits (103), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 27/191 (14%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F + I +P+ S +GK  + +        +Y + L     +RLT      +  ++SP+  +
Sbjct: 351 FANQIRSPKTSPDGKHIVFNALNK----LYIMQLPDGKPKRLTKMDVNEMQPNWSPNGKE 406

Query: 316 IVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA- 372
           IV+   S+++G   LY + + G    +++ +  A Y  PVW  + + I FTK S + F  
Sbjct: 407 IVYTTWSEKDGG-HLYKVNAKGGKPIKLT-NTSALYNTPVWDAKTNRIVFTKGSAQNFKN 464

Query: 373 ------------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                       +  +  DG +   + + +  + P +  S   +  S       GS L S
Sbjct: 465 AYTRGAFSGSEDLAWISSDGGEVNFITKTNGRRNPHFVKSDDRIYLS------NGSGLSS 518

Query: 421 IDLNGRNETLI 431
           I  +G +E  I
Sbjct: 519 IRWDGTDEKKI 529


>gi|89897845|ref|YP_514955.1| translocation protein TolB [Chlamydophila felis Fe/C-56]
 gi|89331217|dbj|BAE80810.1| tolB protein precursor [Chlamydophila felis Fe/C-56]
          Length = 437

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 135/310 (43%), Gaps = 24/310 (7%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILF-VSESVVSGIIKNS-LCVMDRDGANIRYLTPS 209
           R+  H ++D I+ ++T   G  + +I+F +S++   G +K   L  +D DG N+R LT  
Sbjct: 132 RQKIHEVADKIHYALTRVPGISSGKIVFSLSKNPHDGELKQGELWSVDYDGENLRALTQE 191

Query: 210 RDQILFEPRFSPNQQKVA------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                     +PN   +       Y +Y    I +++L     + + K++ N +     P
Sbjct: 192 NSL-----SITPNWLNIGSNNPYFYVSYK-FGIPKIFLGSLE-NTSGKKVLNLQGNQFMP 244

Query: 264 RFSSNGKR-ALIS---VQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIV 317
            FS   K+ A IS      D  +  +S    +    R  L  +     + S+SPD S++V
Sbjct: 245 VFSPRKKQLAFISDAYGNPDLFLQGFSPSQGAMGKPRRVLNESFGTQGNPSFSPDGSKLV 304

Query: 318 FESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGV 375
           F S+++G+ +LY++Q +   Q  R+   K  +   P WSP G  IAF     G +     
Sbjct: 305 FVSNKDGRPRLYIIQVDPEIQTPRLLTKKYRNSSCPSWSPDGKKIAFCSVIKGVRQICLY 364

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
               G   +L     + + P+W+     L++S    G++   L S+     N+ +I    
Sbjct: 365 DLSTGKDYQLTTTPIDKEGPSWAIDSHHLVYSAGNSGESELYLLSLITQKTNKIVIGL-G 423

Query: 436 YASDPQWVGF 445
               P W GF
Sbjct: 424 EKRFPSWGGF 433


>gi|320101787|ref|YP_004177378.1| WD40-like beta Propeller containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319749069|gb|ADV60829.1| WD40-like beta Propeller containing protein [Isosphaera pallida
           ATCC 43644]
          Length = 365

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 26/258 (10%)

Query: 184 VVSGIIKNSLCVMDRDGANI----RYLTPSRDQILFEPRF-SPNQQKVAYATYDDEDILR 238
           V +G  K +      DG +I     +L P  DQ   EPR  SP   + A   +D ++ + 
Sbjct: 96  VSTGRGKCTCAFFHPDGQSIIFASSHLDPKLDQPA-EPRAKSPAYSRDARYRWDFDEWME 154

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAP------RFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           ++       RA    GN   +  AP       +S +GK  + +  +D   +IY +D    
Sbjct: 155 IF-------RADLEGGNLVRLTDAPGYDAEGSYSPDGKSIVFTSFRDGDAEIYIMDADGR 207

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASYF 350
              R+T+    +    +SPD  +I++ SDR+G + L +  ++  G D+++++ + +A  +
Sbjct: 208 NPRRITHAPGYDGGPFFSPDGKRIIYRSDRKGNDLLQIFDNSVEGDDERQLTSN-DAVNW 266

Query: 351 DPVWSPQGDLIAF-TKFSGEKFAIGVMK--KDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            P + P G+   + T   G +     M+  K G+  RL   +     P +SP GR L+++
Sbjct: 267 GPYYHPDGEFFVYSTSIHGHQNYEVYMQSLKTGAMTRLTYVEGFDGLPVFSPDGRKLMWT 326

Query: 408 RK-KDGDTGSKLYSIDLN 424
            K +  D  S+L+  D +
Sbjct: 327 SKGRTADNTSQLFIADFS 344


>gi|118574576|sp|Q256H8|TOLB_CHLFF RecName: Full=Protein tolB; Flags: Precursor
          Length = 427

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 135/310 (43%), Gaps = 24/310 (7%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILF-VSESVVSGIIKNS-LCVMDRDGANIRYLTPS 209
           R+  H ++D I+ ++T   G  + +I+F +S++   G +K   L  +D DG N+R LT  
Sbjct: 122 RQKIHEVADKIHYALTRVPGISSGKIVFSLSKNPHDGELKQGELWSVDYDGENLRALTQE 181

Query: 210 RDQILFEPRFSPNQQKVA------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                     +PN   +       Y +Y    I +++L     + + K++ N +     P
Sbjct: 182 NSL-----SITPNWLNIGSNNPYFYVSYK-FGIPKIFLGSLE-NTSGKKVLNLQGNQFMP 234

Query: 264 RFSSNGKR-ALIS---VQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIV 317
            FS   K+ A IS      D  +  +S    +    R  L  +     + S+SPD S++V
Sbjct: 235 VFSPRKKQLAFISDAYGNPDLFLQGFSPSQGAMGKPRRVLNESFGTQGNPSFSPDGSKLV 294

Query: 318 FESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGV 375
           F S+++G+ +LY++Q +   Q  R+   K  +   P WSP G  IAF     G +     
Sbjct: 295 FVSNKDGRPRLYIIQVDPEIQTPRLLTKKYRNSSCPSWSPDGKKIAFCSVIKGVRQICLY 354

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
               G   +L     + + P+W+     L++S    G++   L S+     N+ +I    
Sbjct: 355 DLSTGKDYQLTTTPIDKEGPSWAIDSHHLVYSAGNSGESELYLLSLITQKTNKIVIGL-G 413

Query: 436 YASDPQWVGF 445
               P W GF
Sbjct: 414 EKRFPSWGGF 423


>gi|269126248|ref|YP_003299618.1| serine/threonine protein kinase [Thermomonospora curvata DSM 43183]
 gi|268311206|gb|ACY97580.1| serine/threonine protein kinase [Thermomonospora curvata DSM 43183]
          Length = 676

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 17/203 (8%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALI 274
           P++SP + ++A+  +       V++++     A ++    N RS +    +S +G     
Sbjct: 446 PQWSPRRDRIAFTRWSGGATSEVWVVNPDGGGAERKADGINGRSRVA---WSPDGASLAA 502

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             +      +  +DL   + E+LT+   +    ++S D  ++ F S R+G +QLY +   
Sbjct: 503 MTRTGGRAQLSVIDLSDGSVEQLTDDRSVKDDPTWSRDG-KLAFWSRRDGSQQLYWLDP- 560

Query: 335 GSDQKR----ISQDKEASYF--DPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQ-ERL 385
            +D +R    ++  + A +   DP+WSP G  +AFT    +G    I V++ DG+   RL
Sbjct: 561 -ADPQRRWRQVTTRRVAPHGANDPIWSPDGRWLAFTVMNEAGHGHDIAVIRADGTGYRRL 619

Query: 386 LVEDSNLQAPTWSPSGRSLIFSR 408
               ++   P+WSP G+ L F R
Sbjct: 620 TTGPAHDMDPSWSPDGKWLAFVR 642



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 31/178 (17%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +++ V+      ER  + +      ++SPD + +   +   G+ QL V+  +    ++++
Sbjct: 467 EVWVVNPDGGGAERKADGINGRSRVAWSPDGASLAAMTRTGGRAQLSVIDLSDGSVEQLT 526

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-------- 394
            D+     DP WS  G L  +++            +DGSQ+   ++ ++ Q         
Sbjct: 527 DDRSVKD-DPTWSRDGKLAFWSR------------RDGSQQLYWLDPADPQRRWRQVTTR 573

Query: 395 ---------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQW 442
                    P WSP GR L F+   +   G  +  I  +G     L   PA+  DP W
Sbjct: 574 RVAPHGANDPIWSPDGRWLAFTVMNEAGHGHDIAVIRADGTGYRRLTTGPAHDMDPSW 631


>gi|305664788|ref|YP_003861075.1| hypothetical protein FB2170_00745 [Maribacter sp. HTCC2170]
 gi|88707910|gb|EAR00149.1| hypothetical protein FB2170_00745 [Maribacter sp. HTCC2170]
          Length = 502

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 19/170 (11%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            PK+I    S      +S +GK      ++++  DIY++ ++     RLT+T  ++    
Sbjct: 325 VPKKITPLASSYWH-GWSPDGKTLAYCAERNDNYDIYTIPIKGGEETRLTSTEGLDDGPD 383

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFS 367
           YSPD   I F S R G  Q++ M+++GS+Q++I+ DK   +F  P  SP G  +A+  F+
Sbjct: 384 YSPDGKYIYFNSTRTGTMQIWRMKTDGSEQEQITTDKYNDWFAHP--SPDGKWLAYVTFN 441

Query: 368 GEKFA----------IGVMKKDGSQERLLVE----DSNLQAPTWSP-SGR 402
            +  A          + +M  +  +  +L +       +  P+WSP SGR
Sbjct: 442 TDVPAGDHPPNKDVMLRLMNIETREVTVLAKIFGGQGTINVPSWSPDSGR 491


>gi|94971181|ref|YP_593229.1| transcriptional regulatory protein-like [Candidatus Koribacter
           versatilis Ellin345]
 gi|94553231|gb|ABF43155.1| transcriptional regulatory protein-like protein [Candidatus
           Koribacter versatilis Ellin345]
          Length = 717

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 82/166 (49%), Gaps = 6/166 (3%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTNTLFINISA 307
           +RIG        P  S NG   L   Q      I+ +DL+   S AT  L++T   + + 
Sbjct: 412 ERIGVGTEDAFGPSVSRNGDH-LAYTQGSSIYGIHRLDLKAPKSAATTILSSTQ-QDSAP 469

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             SPD S++ F+S R G ++++V  S+G + +R++  +++    P WSP G  +AF    
Sbjct: 470 KLSPDGSRVAFQSWRSGTQEVWVAGSDGKNPERVTSFEKSLTGSPSWSPDGKQLAFDARP 529

Query: 368 GEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDG 412
             +  I  ++ DG Q + + + D N   P WS  G+ + F+  + G
Sbjct: 530 EGRSHIYALRLDGGQPKAVTDGDFNDILPNWSSDGKWVYFASNRGG 575



 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 58/239 (24%)

Query: 262 APRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            P FS +GK+ A +   +    D+Y +D       RLTN   +  S S++ D   IV+ S
Sbjct: 334 GPAFSPDGKKIAFVRGSEGWVQDLYVMDAAGGEPTRLTNDGRMMASISWAADGKSIVYSS 393

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------------- 367
           +R GK  L+ + + G   +RI    E + F P  S  GD +A+T+ S             
Sbjct: 394 NRAGKFSLWRIPATGGTAERIGVGTEDA-FGPSVSRNGDHLAYTQGSSIYGIHRLDLKAP 452

Query: 368 ----------------------GEKFA----------IGVMKKDG-SQERLL-VEDSNLQ 393
                                 G + A          + V   DG + ER+   E S   
Sbjct: 453 KSAATTILSSTQQDSAPKLSPDGSRVAFQSWRSGTQEVWVAGSDGKNPERVTSFEKSLTG 512

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           +P+WSP G+ L F  + +G   S +Y++ L+G     +         P ++SD +WV F
Sbjct: 513 SPSWSPDGKQLAFDARPEGR--SHIYALRLDGGQPKAVTDGDFNDILPNWSSDGKWVYF 569



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 8/134 (5%)

Query: 308 SYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           ++SPD +Q+ F  + EG E   +YV         +++ D    Y  P WSP G  IAF +
Sbjct: 193 AFSPDGNQVAFVWNGEGGENRNIYVKIIGSETPLQLTHDAGQDY-SPTWSPDGRSIAFLR 251

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNL-----QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           ++     I ++   G  E  +   + +      A +WSP G+ LIFS  K  ++ S ++ 
Sbjct: 252 YTDTDRGIFMVPALGGAEHKVFTPTGIVEWERNALSWSPDGKRLIFSDGKSANSPSSIFE 311

Query: 421 IDLNGRNETLINTP 434
           +DL       I +P
Sbjct: 312 LDLETGTAKAITSP 325



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 67/128 (52%), Gaps = 3/128 (2%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALIS 275
           P+ SP+  +VA+ ++       V++  +   + P+R+ +F +S+  +P +S +GK+    
Sbjct: 469 PKLSPDGSRVAFQSWR-SGTQEVWVAGSD-GKNPERVTSFEKSLTGSPSWSPDGKQLAFD 526

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            + +    IY++ L     + +T+  F +I  ++S D   + F S+R G  Q++   S G
Sbjct: 527 ARPEGRSHIYALRLDGGQPKAVTDGDFNDILPNWSSDGKWVYFASNRGGAWQIWKAPSEG 586

Query: 336 SDQKRISQ 343
              +++++
Sbjct: 587 GTPQQVTK 594


>gi|168703674|ref|ZP_02735951.1| MdsD protein, putative [Gemmata obscuriglobus UQM 2246]
          Length = 1087

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 17/159 (10%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--------- 346
           RLT   F + + ++SPD  +I+F SDR G   LY ++S+  +   + +  +         
Sbjct: 353 RLTEHEFADSNPAWSPDGKKILFASDRGGTTDLYALESDDPEHSELVKAHKFKTTKLTAT 412

Query: 347 -ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +   +P +SP GD +AF +    +  + +M+ +GS++R+LV    +    W+P G+ + 
Sbjct: 413 TSEELNPTFSPAGDRVAFVR----EGKLWLMRPNGSEQRVLVSAQKVLDYDWAPDGKHIA 468

Query: 406 FSRKKDGDTGSKLY--SIDLNGRNETLINTPAYASDPQW 442
           + R  DG   +++Y  + D  G    +     + SD  W
Sbjct: 469 YCR-MDGSFAAEVYIQATDGTGTPVNVSRHATWNSDVSW 506



 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 16/153 (10%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +GK    S   D    I++V+        +T     +++  +SPD   I F S+R
Sbjct: 30  PDISPDGKTVAFSYLGD----IWTVEAIGGVARPVTMHEAHDVNPVFSPDGRLIAFSSNR 85

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG----VMKK 378
            G+  ++V+ + G   +R++ D         W+P G  + F+      + I     V+  
Sbjct: 86  FGQYDVFVVSAAGGKPRRLTFDSAPDMVT-GWTPDGKGVVFSSPRSVAYPINTECFVVPA 144

Query: 379 DGSQERLLVEDSNL---QAPTWSPSGRSLIFSR 408
           +G  ER L    NL   +   ++P+G ++ F R
Sbjct: 145 EGGAERKL----NLFEAKEAYFAPTGGAVAFVR 173



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 55/223 (24%), Positives = 94/223 (42%), Gaps = 43/223 (19%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           K+  T S+++  + +   GD   R+ FV E          L +M  +G+  R L  ++  
Sbjct: 408 KLTATTSEELNPTFS-PAGD---RVAFVRE--------GKLWLMRPNGSEQRVLVSAQKV 455

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP---KRIGNFRSMILAPRFSSNG 269
           + ++  ++P+ + +AY   D      VY+  T     P    R   + S +   R  +NG
Sbjct: 456 LDYD--WAPDGKHIAYCRMDGSFAAEVYIQATDGTGTPVNVSRHATWNSDVSWSR--TNG 511

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLT---------NTLFINI------SASY---SP 311
           K A +  Q+  A  ++ V LQ    +  T         + L + +      SA Y   SP
Sbjct: 512 KLAFVG-QRRGAYGVHVVSLQKPVADGGTRPPADQIDWDDLHLRVERPTTMSAEYGTVSP 570

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           D SQ+ F S   G + L+V+ SNG    R++   +     P W
Sbjct: 571 DGSQVAFRSASSG-DDLWVVSSNGQALTRMTNGNQT----PSW 608



 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 70/352 (19%), Positives = 129/352 (36%), Gaps = 68/352 (19%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
           FSSP   R +A+ I+ + +  +  E G      LF ++         ++  +   G   R
Sbjct: 125 FSSP---RSVAYPINTECF-VVPAEGGAERKLNLFEAKEAYFAPTGGAVAFVRGPGTWYR 180

Query: 205 --YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR----IDRAPKRIG--NF 256
             Y   S D I        N ++V   T+D +D   ++  D R    +  +  + G  N 
Sbjct: 181 RGYRGSSNDDIWISGPDGSNPKRVT--TFDGQDSYPMFAPDARQLFYVTESQSKPGCANV 238

Query: 257 RSMILAPRFSSNGKRALISVQKDEAM------------------DIYSVDLQSNATERLT 298
               LAP F+  G    I+   D+ +                  D++    +S+   R  
Sbjct: 239 VRQPLAPDFTPAGPAKRITAHDDDTVRRARLSANGDWIVYELGADLWVASARSDLPPR-- 296

Query: 299 NTLFINISA----------SYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQ 343
             L I ++A          +Y+ D+++     D +        QL++ +  G  +     
Sbjct: 297 -KLAIEVNADDKSNTERTHTYTRDATEYALAPDEQHAVLVIHGQLFLTKVPGGGKATRLT 355

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--------- 394
           + E +  +P WSP G  I F    G    +  ++ D  +   LV+    +          
Sbjct: 356 EHEFADSNPAWSPDGKKILFASDRGGTTDLYALESDDPEHSELVKAHKFKTTKLTATTSE 415

Query: 395 ---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              PT+SP+G  + F R+       KL+ +  NG  + ++ +     D  W 
Sbjct: 416 ELNPTFSPAGDRVAFVRE------GKLWLMRPNGSEQRVLVSAQKVLDYDWA 461


>gi|222148505|ref|YP_002549462.1| periplasmic component of the Tol biopolymer transport system
           [Agrobacterium vitis S4]
 gi|221735491|gb|ACM36454.1| periplasmic component of the Tol biopolymer transport system
           [Agrobacterium vitis S4]
          Length = 277

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 13/156 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G+R      +D+  DIY++ +  +  +RLT+    N    +S D   I F S R G
Sbjct: 117 WSPDGQRVCYCGIRDQVFDIYTISVDGSDEQRLTHGEGRNDGPDWSADGEWIYFNSSRSG 176

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVM 376
             Q++ ++ +G D +R++ D +  +F P   P    + F  +  + F         + +M
Sbjct: 177 TMQIWRIRPDGRDVQRLTDDGQGDWF-PHPCPNNRKLVFISYDADVFDHPRDLHVRMRLM 235

Query: 377 KKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
             DG     L E       +  P+WSP G+   + R
Sbjct: 236 DMDGGNVETLFELFGGQGTINVPSWSPDGQEFAYVR 271



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 87/196 (44%), Gaps = 16/196 (8%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           + +Y ++TR  R    +     ++ AP +S +G+  + +   D+ + +Y + L   +   
Sbjct: 5   VEIYNIETRQSRI---VWQTERLVEAPNWSRDGQFLIFN---DDGL-MYRLPLVGQSVPE 57

Query: 297 LTNTLF---INISASYSPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             +T F    N     SPD   + + +    GK  LY++ + G    +I+++  + +   
Sbjct: 58  KIDTGFATQCNNDHGLSPDGQWLAICDKVEHGKTCLYILPAKGGTPIQITENLPSYWHG- 116

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            WSP G  + +     + F I  +  DGS E RL   +     P WS  G  + F+  + 
Sbjct: 117 -WSPDGQRVCYCGIRDQVFDIYTISVDGSDEQRLTHGEGRNDGPDWSADGEWIYFNSSRS 175

Query: 412 GDTGSKLYSIDLNGRN 427
           G    +++ I  +GR+
Sbjct: 176 GTM--QIWRIRPDGRD 189


>gi|332995298|gb|AEF05353.1| amidohydrolase [Alteromonas sp. SN2]
          Length = 1111

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 20/165 (12%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           + S+ +AP    NGK  +     D   DIY V++       +T     NI  S SPD S+
Sbjct: 63  WSSLDIAP----NGKYMVF----DMLGDIYKVNIDGGDATPITQDFAWNIHPSISPDGSK 114

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--------S 367
           I F SDR+G   L++M SNG + ++++++K      P WSP G+ +  +K         +
Sbjct: 115 IAFISDRDGINNLWIMDSNGENLRQVTKEKNNLIHSPKWSPDGEYLLVSKGIMSSRSIPA 174

Query: 368 GEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSR 408
           GE +       DG Q +       +  N+  P +S  G+ + F+ 
Sbjct: 175 GEIWMYHNTGGDGLQIKARNHGKKDQQNIADPVFSHDGKHIYFTE 219



 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 17/160 (10%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V D     ++ LT   D   + PRFS + + + Y T++D+++  V ++  R  +  K 
Sbjct: 398 LYVKDVKSGKMKRLTKQNDHGEYYPRFSNDGKAIVYTTWNDDELGSVRIVSARGGKG-KV 456

Query: 253 IGNFRSMILAPRFSSNGKRA---------LISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           I       + P FSS+ ++          L+  +      IY  DL     +++++    
Sbjct: 457 ITKQPGHYIEPSFSSDREKVVYRKFTGGYLLDPKYSVDPGIYVADLDRKTEKKVSDG--- 513

Query: 304 NISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQK 339
            I+  ++ D+S++ F     G    + QL  +   G+D++
Sbjct: 514 GINPHFADDNSRVYFTESVGGTPYRETQLSSVNLQGNDKR 553


>gi|213028843|ref|ZP_03343290.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 141

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 4/134 (2%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++     
Sbjct: 7   RYAGHTASDEVFEKLTGIKGAFRTRIAYVVQT-NGGQFPYELRVSDYDGYN-QFVVHRSP 64

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           Q L  P +SP+  K+AY T+  E      ++ T  + A +++ +F     AP FS +G +
Sbjct: 65  QPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGTK 122

Query: 272 ALISVQKDEAMDIY 285
              ++ K  ++++Y
Sbjct: 123 LAFALSKTGSLNLY 136


>gi|330443987|ref|YP_004376973.1| TolB protein [Chlamydophila pecorum E58]
 gi|328807097|gb|AEB41270.1| TolB protein precursor [Chlamydophila pecorum E58]
          Length = 423

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 128/315 (40%), Gaps = 30/315 (9%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPS 209
           R+  H  +D ++ ++TG  G  + RI+F          + +  L  +D DG N+  LT  
Sbjct: 118 RQQIHQAADIVHHALTGIPGISSGRIIFSRSKGGKTQELKQGELWAVDYDGGNLVPLT-K 176

Query: 210 RDQILFEPRFS--PNQQKVAYATYD--DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
              +   P+++         Y +Y      I    L +T   +A    GN    + +P  
Sbjct: 177 EASLSVTPKWADLSADSPYFYVSYKLGVPKIFLGSLKNTEGKKALSLTGNQLMPVYSP-- 234

Query: 266 SSNGKRALISVQKD---------EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQ 315
               K+ L++   D         +A   YS  L      RL N  F    S S++P  SQ
Sbjct: 235 ----KKKLLAFIADTYGNPDLFIQAFSPYSGFL--GRPRRLLNETFGTQGSPSFNPQGSQ 288

Query: 316 IVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +VF S+R+G+ +LY+M  +   Q  R+   K  +   P WSP G  IAF         I 
Sbjct: 289 LVFVSNRDGRPRLYIMNLDPEPQSPRLLTKKYRNCSCPTWSPDGKKIAFCSVIKGTRQIC 348

Query: 375 VMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
           V     G   +L     + + P+W+   R L+FS     +  S+LY + L   + + ++ 
Sbjct: 349 VYDLTSGEGSQLTTSPQDKEGPSWAADSRHLVFSSGNAEE--SELYLLSLITKKTKKIVI 406

Query: 433 TPAYASDPQWVGFMD 447
                  P W  F+ 
Sbjct: 407 GSGEKRFPSWGAFLH 421


>gi|320106330|ref|YP_004181920.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319924851|gb|ADV81926.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
          Length = 760

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/318 (23%), Positives = 127/318 (39%), Gaps = 59/318 (18%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT-PSRDQILFEPRFSPNQQK 225
           TG     + + L VS+   SG     L   D +   +  LT PS D+    P  S + + 
Sbjct: 326 TGPSWSSDGKGLIVSDVAPSGR-GMGLYRFDLNTHELHSLTNPSSDERDLNPTLSSDGKW 384

Query: 226 VAYA---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           +AYA   +YD  D+    L+D R     +R+ +  + +    +S+  +  + S  +  A 
Sbjct: 385 LAYARFSSYDSSDVFIRSLLDGR----ERRLTSDHTDVQGLAWSAGNREIVFSSNRGGAY 440

Query: 283 DIYSVDLQSNATERLTNT---------------------------LFINIS--------- 306
            ++++ L       ++ T                           L I +S         
Sbjct: 441 GLWTIGLDGGNPSPISATGESAIQPAISRDGQFLVYADFTLRSEILKIGVSQAGTSVPPV 500

Query: 307 -----------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                      A +SPD S+I F SDR GK +L+V  ++G +  +++     S   P WS
Sbjct: 501 SVAPSIRSSHSAQFSPDGSRIAFVSDRSGKWELWVSSADGKEASQLTNFDTGSVGSPRWS 560

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           P G  IAF      + AI V+  DG   R L  +    + P WS  G+ + F   + G  
Sbjct: 561 PDGLSIAFDARPNGRSAIFVISPDGQGLRNLSPKGQEEKQPAWSSDGKWIYFDSNRAGSM 620

Query: 415 GSKLYSIDLNGRNETLIN 432
             +L+ +  +G + T ++
Sbjct: 621 --QLWKMTTSGSDATSVS 636



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 69/172 (40%), Gaps = 25/172 (14%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           LT  L  +   + SPD   + F  +  G    +YV++  G   +  +     +   PVWS
Sbjct: 218 LTTFLGESYQPNVSPDGKSVAFIWNNGGSTYSVYVVRPGGKPLRVTA--GPGTDIHPVWS 275

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---------ED----SNLQAPTWSPSGR 402
           P G+LIAF + +     + V+   G  E  L          ED     N   P+WS  G+
Sbjct: 276 PDGNLIAFLRVTSSGSQVRVVSFPGGSENALFALRNGRPWSEDLLGIRNDTGPSWSSDGK 335

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRN-ETLIN--------TPAYASDPQWVGF 445
            LI S       G  LY  DLN     +L N         P  +SD +W+ +
Sbjct: 336 GLIVSDVAPSGRGMGLYRFDLNTHELHSLTNPSSDERDLNPTLSSDGKWLAY 387



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 78/197 (39%), Gaps = 56/197 (28%)

Query: 262 APRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            P +SS+GK  ++S        M +Y  DL ++    LTN                    
Sbjct: 327 GPSWSSDGKGLIVSDVAPSGRGMGLYRFDLNTHELHSLTNP------------------- 367

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK- 378
                           SD++ +         +P  S  G  +A+ +FS    +   ++  
Sbjct: 368 ---------------SSDERDL---------NPTLSSDGKWLAYARFSSYDSSDVFIRSL 403

Query: 379 -DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT---- 433
            DG + RL  + +++Q   WS   R ++FS  + G  G  L++I L+G N + I+     
Sbjct: 404 LDGRERRLTSDHTDVQGLAWSAGNREIVFSSNRGGAYG--LWTIGLDGGNPSPISATGES 461

Query: 434 ---PAYASDPQWVGFMD 447
              PA + D Q++ + D
Sbjct: 462 AIQPAISRDGQFLVYAD 478



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 3/127 (2%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISV 276
           +FSP+  ++A+ + D      +++       A  ++ NF +  + +PR+S +G       
Sbjct: 513 QFSPDGSRIAFVS-DRSGKWELWVSSADGKEA-SQLTNFDTGSVGSPRWSPDGLSIAFDA 570

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           + +    I+ +         L+         ++S D   I F+S+R G  QL+ M ++GS
Sbjct: 571 RPNGRSAIFVISPDGQGLRNLSPKGQEEKQPAWSSDGKWIYFDSNRAGSMQLWKMTTSGS 630

Query: 337 DQKRISQ 343
           D   +SQ
Sbjct: 631 DATSVSQ 637


>gi|73669137|ref|YP_305152.1| hypothetical protein Mbar_A1627 [Methanosarcina barkeri str.
           Fusaro]
 gi|72396299|gb|AAZ70572.1| hypothetical protein Mbar_A1627 [Methanosarcina barkeri str.
           Fusaro]
          Length = 615

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 25/191 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           I  S   MD DG+N   +      I      SP+  K+A   +   D+   Y +D  + +
Sbjct: 159 IGGSYWEMDSDGSNKHNI--GNMGIANGIALSPDASKIAICAHGPADV--DYYID--VGK 212

Query: 249 APKRIGNFR------------SMILAPRFSS----NGKRALISVQKDEAMDIYSVDLQSN 292
             K + +FR            S I AP  S      GK    S  +DE  +IY V     
Sbjct: 213 VGKDLTSFRYGLITHQTQSRQSQIWAPDGSKIVYYAGKNE--SYYEDENSEIYIVKADGT 270

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              +LT+    + S  +SPD S+IVF SD+ G E +++M ++G ++ +++ D  +  F P
Sbjct: 271 GRIQLTSDSANDNSPVFSPDGSKIVFVSDKAGNEDIWIMDADGKNKVQLTSDPASDSF-P 329

Query: 353 VWSPQGDLIAF 363
           VWSP G  IAF
Sbjct: 330 VWSPDGKKIAF 340



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 25/251 (9%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTR 245
           ++ L +M+ +G   + L    D I +   +     P   K+ YA   +E     + MD+ 
Sbjct: 113 RSDLWIMNSNGEGKKQL---LDTIWYRYYYIYTWFPTGSKILYAEIYEEIGGSYWEMDS- 168

Query: 246 IDRAPKR-IGNF---RSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTN 299
            D + K  IGN      + L+P  S     A      D  +D+  V  DL S     +T+
Sbjct: 169 -DGSNKHNIGNMGIANGIALSPDASKIAICAHGPADVDYYIDVGKVGKDLTSFRYGLITH 227

Query: 300 TLFINISASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                 S  ++PD S+IV+ + +      +   ++Y+++++G+ + +++ D  A+   PV
Sbjct: 228 QTQSRQSQIWAPDGSKIVYYAGKNESYYEDENSEIYIVKADGTGRIQLTSD-SANDNSPV 286

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
           +SP G  I F         I +M  DG  +  L  D    + P WSP G+ + F   + G
Sbjct: 287 FSPDGSKIVFVSDKAGNEDIWIMDADGKNKVQLTSDPASDSFPVWSPDGKKIAFWSNRGG 346

Query: 413 DTGSKLYSIDL 423
           +  + +Y++ L
Sbjct: 347 N--NNIYTLTL 355



 Score = 42.0 bits (97), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 32/150 (21%), Positives = 76/150 (50%), Gaps = 14/150 (9%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           DL++    ++ + + ++ +  +SPD  +I+F   RE    LY + S+G+ + +++  K  
Sbjct: 29  DLEAEKLTKVASNVALDSNPVWSPDGKEILFS--RE--NGLYKVFSDGTGEMKLTSTKGK 84

Query: 348 SYF-DPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWS 398
           ++  D  WSP G  I++ +      +G +  + +M  +G  ++ L++          TW 
Sbjct: 85  NFTSDYAWSPDGSKISYIENRYDTAAGPRSDLWIMNSNGEGKKQLLDTIWYRYYYIYTWF 144

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           P+G  ++++   + + G   + +D +G N+
Sbjct: 145 PTGSKILYAEIYE-EIGGSYWEMDSDGSNK 173


>gi|154494285|ref|ZP_02033605.1| hypothetical protein PARMER_03636 [Parabacteroides merdae ATCC
           43184]
 gi|154085969|gb|EDN85014.1| hypothetical protein PARMER_03636 [Parabacteroides merdae ATCC
           43184]
          Length = 302

 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 9/181 (4%)

Query: 265 FSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            +++GK+  IS   ++D    IY++ +Q   T RL   +  +    +SPD  Q+ + +DR
Sbjct: 90  IAADGKQIAISHGTKEDGKSRIYTLPMQG-GTPRLITPIAPSYLHGWSPDGRQLAYCADR 148

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G   +YV+   G ++++++   E     P +SP G+ I F         +  MKKDGS+
Sbjct: 149 KGNYDIYVIPVEGGEERQLTT-AEGLDDGPEYSPCGEYIWFNSVRTGLMQVWRMKKDGSE 207

Query: 383 ERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           +  +   E  N   P  SP G+S+IF     GD     +   L  +N  L   PA    P
Sbjct: 208 QTQMTFDETRNSWFPHVSPDGKSVIFITYYKGDLEPGQH---LPNKNVELRIMPATGGKP 264

Query: 441 Q 441
           +
Sbjct: 265 K 265



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 20/183 (10%)

Query: 244 TRIDRAPKRIGNFRSMI-LAPRF----SSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +RI   P + G  R +  +AP +    S +G++      +    DIY + ++     +LT
Sbjct: 109 SRIYTLPMQGGTPRLITPIAPSYLHGWSPDGRQLAYCADRKGNYDIYVIPVEGGEERQLT 168

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               ++    YSP    I F S R G  Q++ M+ +GS+Q +++ D+  + + P  SP G
Sbjct: 169 TAEGLDDGPEYSPCGEYIWFNSVRTGLMQVWRMKKDGSEQTQMTFDETRNSWFPHVSPDG 228

Query: 359 DLIAF-TKFSGE----------KFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRS 403
             + F T + G+             + +M   G + + LV+       +   +W+P  + 
Sbjct: 229 KSVIFITYYKGDLEPGQHLPNKNVELRIMPATGGKPKTLVKLFGGQGTINVNSWAPDSKH 288

Query: 404 LIF 406
           + F
Sbjct: 289 IAF 291


>gi|325110069|ref|YP_004271137.1| peptidase M28 [Planctomyces brasiliensis DSM 5305]
 gi|324970337|gb|ADY61115.1| peptidase M28 [Planctomyces brasiliensis DSM 5305]
          Length = 1051

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 106/242 (43%), Gaps = 29/242 (11%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           E R SP   K     +   D  RV    T  D+  K     +   L  R +   KR   S
Sbjct: 117 EERISPGVGKTT-CGWIHPDGERVLFASTHQDKEAKAK---QKQELDAREAGEQKR--YS 170

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---------EGKE 326
              D   ++++ + ++    +LTN L  +   SYSPD S I F S+R         E KE
Sbjct: 171 WDYDPTYELFAYNRKTKQYTQLTNELGYDAEGSYSPDGSLIAFASNRGAYERELTAEEKE 230

Query: 327 QL----------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIG 374
           QL          YVM ++GS+ ++++ D       P +SP G  I + +F   G    I 
Sbjct: 231 QLERDPAAFMEIYVMNADGSNVRQLT-DVFGYDGGPFFSPDGKRICWRRFDKHGATAEIM 289

Query: 375 VMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            M  DGS  R L +   +  AP + PSG  L+F+  + G +  +LY +  +G+ + +  T
Sbjct: 290 TMNVDGSDVRQLTDWQVMSWAPFYHPSGEYLVFTTNRHGFSNFELYLVAADGQQDPIRVT 349

Query: 434 PA 435
            A
Sbjct: 350 NA 351



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 72/142 (50%), Gaps = 12/142 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFE--PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           + VM+ DG+N+R LT   D   ++  P FSP+ +++ +  +D        +M   +D + 
Sbjct: 242 IYVMNADGSNVRQLT---DVFGYDGGPFFSPDGKRICWRRFDKHGAT-AEIMTMNVDGSD 297

Query: 251 KR-IGNFRSMILAPRFSSNGKRALISVQKD--EAMDIY--SVDLQSNATERLTNTLFINI 305
            R + +++ M  AP +  +G+  + +  +      ++Y  + D Q +   R+TN    + 
Sbjct: 298 VRQLTDWQVMSWAPFYHPSGEYLVFTTNRHGFSNFELYLVAADGQQDPI-RVTNADGFDG 356

Query: 306 SASYSPDSSQIVFESDREGKEQ 327
             ++SPD + +V+ S+R   +Q
Sbjct: 357 LPAFSPDGNTLVWTSNRTDAKQ 378


>gi|298675386|ref|YP_003727136.1| WD40 domain-containing protein beta Propeller [Methanohalobium
           evestigatum Z-7303]
 gi|298288374|gb|ADI74340.1| WD40 domain protein beta Propeller [Methanohalobium evestigatum
           Z-7303]
          Length = 616

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 117/260 (45%), Gaps = 25/260 (9%)

Query: 192 SLCVMDRDGANIRYL-----TP-----SRDQILFEPRFSPNQQKVAYATYD---DEDILR 238
           +L +M+ DG +I+ +     TP       D+++  P +SP+     Y + +   + +IL 
Sbjct: 101 ALYIMNADGFDIKRIAWGEYTPYTRKVGNDKLIGLPSWSPDGDVFTYTSEELAKNGNILG 160

Query: 239 VYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATE 295
            +L+    +      G+F S  +    ++S +G   L    +K E    Y +DL  N T 
Sbjct: 161 EFLIVDADNLNTIEKGSFISNKIDFIKKWSPDGSYLLYRGYKKGEGPKCYLLDLTRNITR 220

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           R   T +     ++SP  ++I F  + +G E  +V   +  + K I   K +S  +P+WS
Sbjct: 221 RFPITQYNPEDITWSPKGNKIAFLGEEKGNESAFVYNLDNGNLKNIFSTKNSSIHNPLWS 280

Query: 356 PQGDLIAFTKFSGEK----FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           P G  +AF+K         + I +   +G   +L      +    W  S + L+++    
Sbjct: 281 PDGRKLAFSKIEDNNVKDVYVIDINVVNGRPYKLTTLHGGILVE-WLDSEK-LLYTEYSP 338

Query: 412 GDTGSKLYSIDLNGRNETLI 431
            D    LYSI +N RN+TL+
Sbjct: 339 EDN---LYSISVNSRNKTLL 355



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 105/234 (44%), Gaps = 23/234 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAP 250
           S  V + D  N++ +  +++  +  P +SP+ +K+A++  +D ++  VY++D  + +  P
Sbjct: 252 SAFVYNLDNGNLKNIFSTKNSSIHNPLWSPDGRKLAFSKIEDNNVKDVYVIDINVVNGRP 311

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASY 309
            ++      IL     S     L+  +     ++YS+ + S N T    +T    I  SY
Sbjct: 312 YKLTTLHGGILVEWLDS---EKLLYTEYSPEDNLYSISVNSRNKTLLYNSTNESGIDYSY 368

Query: 310 SPDS-----SQIVFESDREG---KEQLYV-----MQSNGSDQKRISQDKEASYFDPVWSP 356
           S  S      + VF  ++ G   K   Y+     M+++GSD K    + +   F+  W  
Sbjct: 369 SDHSFVDPTGEFVFVEEQIGLNYKTHGYINKFTLMKTDGSDTKHWRINPQG--FE--WCG 424

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              L+     +     + V     S+  + V  S+++   W+P+GR L F+R +
Sbjct: 425 DDLLLEVVTENDTNKLVMVNASTKSESNISVNGSHIEKINWNPTGRYL-FTRNQ 477


>gi|94494977|ref|ZP_01301558.1| hypothetical protein SKA58_00750 [Sphingomonas sp. SKA58]
 gi|94425243|gb|EAT10263.1| hypothetical protein SKA58_00750 [Sphingomonas sp. SKA58]
          Length = 978

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 23/180 (12%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +A   S +GK   + +Q      ++ +        R+T+         ++PD S +++ +
Sbjct: 39  MAVSASPDGKWLAVDLQGS----LWIIPAAGGKARRITDYFNDARQPVWAPDGSHLLYFA 94

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKF------- 371
            R+G   L+ ++ +GSD +R++Q    +Y D  PV+SP G  IAF+      +       
Sbjct: 95  YRDGGYDLWTIKPDGSDMRRLTQ---GAYDDREPVYSPDGKTIAFSSDRSGNYDIWTMDV 151

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           A G MK+  S  R   ED   + PTWSP GR + ++   +G  G  LY  DL    E+L+
Sbjct: 152 ATGAMKQISSNPR---ED---RMPTWSPDGRRVAYA-GAEGMMGGALYVTDLATGQESLL 204



 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 69/154 (44%), Gaps = 13/154 (8%)

Query: 260 ILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           I  PR S +G R A +++      D+Y V  +    E LT    ++  A +SPD  +IVF
Sbjct: 309 ITHPRLSPDGSRIAFVALG-----DLYIVSSKGGTPENLTKDAALDADADWSPDGRRIVF 363

Query: 319 ESDREGK-EQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            SDR G   QL++     G D++  + D +       WSP G  IAF    G     GV 
Sbjct: 364 SSDRVGGLPQLFIKDLKTGKDRQLTNMDTQP--LGAAWSPDGKQIAFIDVDGRWGVAGVC 421

Query: 377 KKD---GSQERLLVEDSNLQAPTWSPSGRSLIFS 407
             D   G   RL        +P+WS  G+ ++ S
Sbjct: 422 VVDVASGKVTRLQTSLGQPGSPSWSADGKYVVIS 455



 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 3/153 (1%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +RI ++ +    P ++ +G   L    +D   D++++    +   RLT   + +    YS
Sbjct: 69  RRITDYFNDARQPVWAPDGSHLLYFAYRDGGYDLWTIKPDGSDMRRLTQGAYDDREPVYS 128

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-E 369
           PD   I F SDR G   ++ M       K+IS +       P WSP G  +A+    G  
Sbjct: 129 PDGKTIAFSSDRSGNYDIWTMDVATGAMKQISSNPREDRM-PTWSPDGRRVAYAGAEGMM 187

Query: 370 KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSG 401
             A+ V      QE LL + +    AP++ P G
Sbjct: 188 GGALYVTDLATGQESLLKKVEGKADAPSFGPGG 220



 Score = 43.1 bits (100), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 90/216 (41%), Gaps = 27/216 (12%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P +   +  PR SP+  ++A+    D     +Y++ ++    P+ +    ++     +S 
Sbjct: 303 PRKALGITHPRLSPDGSRIAFVALGD-----LYIVSSK-GGTPENLTKDAALDADADWSP 356

Query: 268 NGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--ESDREG 324
           +G+R + S  +   +  ++  DL++    +LTN     + A++SPD  QI F     R G
Sbjct: 357 DGRRIVFSSDRVGGLPQLFIKDLKTGKDRQLTNMDTQPLGAAWSPDGKQIAFIDVDGRWG 416

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---KFSGEKFAIG-----VM 376
              + V+        R+ Q        P WS  G  +  +   K+S   F  G     V+
Sbjct: 417 VAGVCVVDVASGKVTRL-QTSLGQPGSPSWSADGKYVVISLSYKYS-NSFREGTNQVYVI 474

Query: 377 KKDGS--------QERLLVEDSNLQAPTWSPSGRSL 404
             DG+        QE + ++  +   P WSP G  +
Sbjct: 475 PVDGTTKPFWQIPQENMSLDTRSGSGPAWSPDGTRM 510



 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 96/250 (38%), Gaps = 27/250 (10%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +SP+ ++VAYA  +      +Y+ D    +    +        AP F   G  A + V
Sbjct: 169 PTWSPDGRRVAYAGAEGMMGGALYVTDLATGQE-SLLKKVEGKADAPSFGPGGALAYV-V 226

Query: 277 QKDEAMDIYSVDLQSNATERL--------TNTLFINISASY----SPDSSQIVFESDREG 324
           Q      ++  D Q + TE +        T   +  +S        P  S + F +  E 
Sbjct: 227 QDASGSHLFIDDKQVSGTENVFPFRVSWGTGGGYHYVSDGKVRQGGPRKSTVDFAATLEV 286

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
               Y       D    +  K      P  SP G  IAF    G+ +   V  K G+ E 
Sbjct: 287 VRPSYTRAKR--DWDSTAPRKALGITHPRLSPDGSRIAFVAL-GDLYI--VSSKGGTPEN 341

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT------PAYA 437
           L  + +      WSP GR ++FS  + G    +L+  DL  G++  L N        A++
Sbjct: 342 LTKDAALDADADWSPDGRRIVFSSDRVGGL-PQLFIKDLKTGKDRQLTNMDTQPLGAAWS 400

Query: 438 SDPQWVGFMD 447
            D + + F+D
Sbjct: 401 PDGKQIAFID 410


>gi|167621951|ref|YP_001672245.1| amidohydrolase [Shewanella halifaxensis HAW-EB4]
 gi|167351973|gb|ABZ74586.1| amidohydrolase [Shewanella halifaxensis HAW-EB4]
          Length = 1064

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 15/153 (9%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NGK  +     D   DIY + +     + L   +   +   YSPD   I F SD +G 
Sbjct: 58  SPNGKHVVF----DLLGDIYQMPIDGGEAKPLAEGIAWQMQPVYSPDGKYIAFTSDEDGG 113

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMK 377
           + +++MQ++GS+ + ++ +       P WSP G  L+A   F+       GE +   V  
Sbjct: 114 DNIWIMQADGSNPRPVTNETFRLLNSPAWSPDGQYLVARKHFTGSRSLGAGEVWMYHVAG 173

Query: 378 KDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSR 408
            DG +  ER   E  +L  P +SP GR + FS+
Sbjct: 174 GDGVKLTER-PNEQKDLGEPAYSPDGRYIYFSQ 205



 Score = 45.4 bits (106), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 55/280 (19%)

Query: 208 PSRDQILFEPRFSPNQQKVAYAT---------YDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           P+  + L EP +SP+ + + ++          Y  + +  +Y    +I R   + G+   
Sbjct: 183 PNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVKGIY----KIKRYDTQTGDIEV 238

Query: 259 MI------LAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTL---------- 301
           +I      + P  S +GK+ L  +++D     +Y +DL+S  TE+L   L          
Sbjct: 239 LIQGTGGAIRPTPSPDGKK-LAYIKRDGFQSSLYLLDLKSGETEKLYGDLDRDMQETWAI 297

Query: 302 -FINISASYSPDSSQIVFES-------DREGK---EQLYVMQSNGSDQK--RISQDKEAS 348
             +  + S++ D+ +I+F +       D E K   +  + ++S  + Q   R +QD +  
Sbjct: 298 HGVYPTMSWTADNEEILFWANGKINKLDVESKSVAQIPFTVKSERAVQPAVRFTQDLDKD 357

Query: 349 YFD------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPS 400
            FD         SP G  +AF      K  +  +  DG   RL   DS+L+   P WS  
Sbjct: 358 VFDVKMLRMAQVSPDGKKVAFEALG--KIWVKSLP-DGKMSRLTKLDSDLRELFPQWSRD 414

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           G+ ++F+   D + G+   +   N R + L N P    +P
Sbjct: 415 GKRIVFTTWDDQEQGTVSLATVRNKRVKALTNEPGKYVEP 454



 Score = 43.9 bits (102), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 45/211 (21%), Positives = 96/211 (45%), Gaps = 25/211 (11%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVY---LMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           ++L   + SP+ +KVA+     E + +++   L D ++ R  K   + R +   P++S +
Sbjct: 362 KMLRMAQVSPDGKKVAF-----EALGKIWVKSLPDGKMSRLTKLDSDLRELF--PQWSRD 414

Query: 269 GKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--- 324
           GKR + +   D+     S+  +++   + LTN     +  ++SPD   +V+   + G   
Sbjct: 415 GKRIVFTTWDDQEQGTVSLATVRNKRVKALTNEPGKYVEPTFSPDGETVVYRKAKGGYIT 474

Query: 325 ------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                 +  LY +  +G    +I+    A+ + P +    D + F + SGE   +  +  
Sbjct: 475 PRTWSQETGLYQVDIDGDKNTKIT----AAGYQPQFGADNDRVYFME-SGETPQLASIGL 529

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           +G ++R+     +      SP G+ L F+ +
Sbjct: 530 NGFEKRVHYTSKHATEFRVSPDGKQLAFAER 560



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 22/157 (14%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTK 365
           A  SPD  ++ FE+   GK  ++V         R+++ D +     P WS  G  I FT 
Sbjct: 367 AQVSPDGKKVAFEA--LGK--IWVKSLPDGKMSRLTKLDSDLRELFPQWSRDGKRIVFTT 422

Query: 366 FSGEKFAIGVMK--KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG---------DT 414
           +  ++     +   ++   + L  E      PT+SP G ++++ + K G         +T
Sbjct: 423 WDDQEQGTVSLATVRNKRVKALTNEPGKYVEPTFSPDGETVVYRKAKGGYITPRTWSQET 482

Query: 415 GSKLYSIDLNGRNETLINT----PAYASDPQWVGFMD 447
           G  LY +D++G   T I      P + +D   V FM+
Sbjct: 483 G--LYQVDIDGDKNTKITAAGYQPQFGADNDRVYFME 517



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 28/156 (17%)

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK----EASYFDPVWSP 356
           L+  I+ S+S   +  + E D++        Q N   +  + Q K    E ++ +   SP
Sbjct: 9   LYAAIALSFS---TPTIAEEDKQ------AWQVNAPAKAPLEQIKIDVSEGTWMNVSVSP 59

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTG 415
            G  + F         I  M  DG + + L E    Q  P +SP G+ + F+  +DG  G
Sbjct: 60  NGKHVVFDLLGD----IYQMPIDGGEAKPLAEGIAWQMQPVYSPDGKYIAFTSDEDG--G 113

Query: 416 SKLYSIDLNG------RNET--LINTPAYASDPQWV 443
             ++ +  +G       NET  L+N+PA++ D Q++
Sbjct: 114 DNIWIMQADGSNPRPVTNETFRLLNSPAWSPDGQYL 149


>gi|119504089|ref|ZP_01626170.1| hypothetical protein MGP2080_10073 [marine gamma proteobacterium
           HTCC2080]
 gi|119460092|gb|EAW41186.1| hypothetical protein MGP2080_10073 [marine gamma proteobacterium
           HTCC2080]
          Length = 1101

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 28/199 (14%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G R +     D   D+YSV L   +   LT  +  N   ++SPD  +I F SDR+G 
Sbjct: 54  SPDGTRVIF----DMLGDLYSVPLSGGSVTALTEGIEWNFQPTFSPDGKRIAFVSDRDGN 109

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIG---VMKKDG 380
           + ++VM  +GS+  +++ +++ +  +P WSP    IA  K   SG     G   +   +G
Sbjct: 110 DNIWVMDIDGSNVTQVTSERKHNLHNPAWSPDSQWIAVRKGTVSGRSIPSGEIWMYHVNG 169

Query: 381 SQERLLVEDSN-------LQAPTWSPSGRSLIFSR--------KKDGDTGSKLYSI---D 422
                +V++++       +  P +SP G  L +S+        + + D+  ++++I   D
Sbjct: 170 GSGIEVVDNTDGTRAQKSIAEPAFSPDGDYLYYSQDTTSGWVWQYNKDSTGEIFAIRRLD 229

Query: 423 L-NGRNETLINTPAYASDP 440
           L  G  +T+   P  A  P
Sbjct: 230 LTTGEIDTITGGPGGAVRP 248



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 19/180 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           LT  RD   + P  S + Q+V Y +++D+D+ RV ++  +   + K +       + P+F
Sbjct: 400 LTEQRDHFEYWPALSADGQQVVYTSWNDQDLGRVKVVSAKGGPS-KTLVKTPGHYVQPKF 458

Query: 266 SSNGKRA---------LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           S +G+           L+S        IY V  +     ++++        ++S D S++
Sbjct: 459 SPDGEMVVYRKTTGGYLLSPLWSVEPGIYLVKTEGGTPIKISSA---GHHPTFSADGSRV 515

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +F +  E   +L+ +   G D++ I+Q ++ + +    SP G+ +AFT    E F + VM
Sbjct: 516 LFTTRGEKGLELHSVDHMGLDKRVIAQGEKVTSY--AVSPDGNWLAFT----EHFRVYVM 569


>gi|62548395|gb|AAX86840.1| TolB [Aggregatibacter actinomycetemcomitans]
          Length = 183

 Score = 65.5 bits (158), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 73/174 (41%), Gaps = 36/174 (20%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G R   +  KD  ++IY  +L S    +LT+    N   S+SPD   IVF SD
Sbjct: 6   APAFSPDGSRLAFASSKDGVLNIYVTNLGSGQVSQLTSGAGNNTEPSWSPDGQSIVFTSD 65

Query: 322 REGKEQLYVMQSNGS--------DQKRISQDKE-------------------------AS 348
           R G  Q+Y M ++G            +IS D                           ++
Sbjct: 66  RGGSPQVYRMSASGGGASLIGGRGSGQISSDGNLLVMVDVNNNIVKKDLTSGSSEVLSST 125

Query: 349 YFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           + D  P  SP G ++ ++   G    + ++  DG  + RL   D  ++ P WSP
Sbjct: 126 FLDESPSISPNGIMVIYSSTQGLGKVLQLVSTDGRFKARLPGNDGQVKFPAWSP 179



 Score = 40.4 bits (93), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 1/83 (1%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N + ++SPD S++ F S ++G   +YV    GS Q         +  +P WSP G  I F
Sbjct: 4   NGAPAFSPDGSRLAFASSKDGVLNIYVTNL-GSGQVSQLTSGAGNNTEPSWSPDGQSIVF 62

Query: 364 TKFSGEKFAIGVMKKDGSQERLL 386
           T   G    +  M   G    L+
Sbjct: 63  TSDRGGSPQVYRMSASGGGASLI 85


>gi|256421833|ref|YP_003122486.1| hypothetical protein Cpin_2806 [Chitinophaga pinensis DSM 2588]
 gi|256036741|gb|ACU60285.1| WD40 domain protein beta Propeller [Chitinophaga pinensis DSM 2588]
          Length = 509

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 16/157 (10%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GK  + + Q++   DIY V  +     RLT    ++    Y+PD   I F S R G
Sbjct: 339 WSPDGKYLVFTGQRNNDFDIYRVPAKGGEEVRLTTAPGLDDGPEYTPDGKYIYFNSVRSG 398

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-----------FAI 373
             Q++ M  +GS+Q +I+ D   ++F P  SP G  I F  F  E+             +
Sbjct: 399 MMQIWRMAPDGSNQTQITNDDFHNWF-PHISPDGKWIVFLSFLKEEVDASDHPFYKHVYL 457

Query: 374 GVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIF 406
            +M   G   +++         +  P+WSP  R + F
Sbjct: 458 RLMPATGGPAKVIAYLYGGQGTINTPSWSPDSRRIAF 494



 Score = 36.6 bits (83), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 11/77 (14%)

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGS 416
           DL A+ ++ G +     +    +Q  ++V  +  ++QAP W+  G+SLI++++       
Sbjct: 215 DLKAYKQYIGSQLE---LMDIATQHSIIVYQTPGSIQAPNWNQDGQSLIYNKE------G 265

Query: 417 KLYSIDLNGRNETLINT 433
           KLY  DL  R  + INT
Sbjct: 266 KLYQFDLRTRTPSPINT 282


>gi|18645084|gb|AAL76385.1| conserved hypothetical protein [uncultured marine proteobacterium]
          Length = 1101

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 28/199 (14%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G R +     D   D+YSV L   +   LT  +  N   ++SPD  +I F SDR+G 
Sbjct: 54  SPDGTRVIF----DMLGDLYSVPLSGGSVTALTEGIEWNFQPTFSPDGKRIAFVSDRDGN 109

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIG---VMKKDG 380
           + ++VM  +GS+  +++ +++ +  +P WSP    IA  K   SG     G   +   +G
Sbjct: 110 DNIWVMDIDGSNVTQVTSERKHNLHNPAWSPDSQWIAVRKGTVSGRSIPSGEIWMYHVNG 169

Query: 381 SQERLLVEDSN-------LQAPTWSPSGRSLIFSR--------KKDGDTGSKLYSI---D 422
                +V +++       +  P +SP G  L +S+        + + D+  ++++I   D
Sbjct: 170 GSGIEVVNNTDGTRAQKSIAEPAFSPDGDYLYYSQDTTSGWVWQYNKDSTGEIFAIRRLD 229

Query: 423 L-NGRNETLINTPAYASDP 440
           L  G  +T+   P  A  P
Sbjct: 230 LTTGEIDTITGGPGGAVRP 248



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 85/181 (46%), Gaps = 21/181 (11%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPR 264
           LT  RD   + P  S + Q+V Y +++D+D+ RV ++  +    P R +       + P+
Sbjct: 400 LTEQRDHFEYWPALSADGQQVVYTSWNDQDLGRVKVVTAK--GGPSRTLVKTPGHYVQPK 457

Query: 265 FSSNGKRA---------LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           FS +G+           L+S        IY V  +     ++++        ++S D S+
Sbjct: 458 FSPDGEMVVYRKTTGGYLLSPLWSVEPGIYLVKTEGGTPIKISSA---GHHPTFSADGSR 514

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           ++F +  E   +L+ +   G D++ I+Q ++ + +    SP G+ +AFT    E F + V
Sbjct: 515 VLFTTRGEKGLELHSVDHMGLDKRVIAQGEKVTSY--AVSPDGNWLAFT----EHFRVYV 568

Query: 376 M 376
           M
Sbjct: 569 M 569



 Score = 37.0 bits (84), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 83/194 (42%), Gaps = 26/194 (13%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQI-VFES 320
           P FS +GKR      +D   +I+ +D+  +   ++T+    N+ + ++SPDS  I V + 
Sbjct: 91  PTFSPDGKRIAFVSDRDGNDNIWVMDIDGSNVTQVTSERKHNLHNPAWSPDSQWIAVRKG 150

Query: 321 DREGKE----QLYVMQSNGSDQKRISQDKEA-----SYFDPVWSPQGDLIAFTK------ 365
              G+     ++++   NG     +  + +      S  +P +SP GD + +++      
Sbjct: 151 TVSGRSIPSGEIWMYHVNGGSGIEVVNNTDGTRAQKSIAEPAFSPDGDYLYYSQDTTSGW 210

Query: 366 -------FSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                   +GE FAI  +    G  + +         PT SP G  L F ++   D  S 
Sbjct: 211 VWQYNKDSTGEIFAIRRLDLTTGEIDTITGGPGGAVRPTPSPDGSKLAFVKRLP-DFNSA 269

Query: 418 LYSIDLNGRNETLI 431
           +   DL    ET++
Sbjct: 270 IVIRDLTSGMETIV 283


>gi|163756342|ref|ZP_02163456.1| WD40-like repeat/amidohydrolase domain protein [Kordia algicida
           OT-1]
 gi|161323694|gb|EDP95029.1| WD40-like repeat/amidohydrolase domain protein [Kordia algicida
           OT-1]
          Length = 1094

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 25/197 (12%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NGK  +     D   DIY++ +     + L   +   I   +SPD S+I+F SD  G 
Sbjct: 58  SPNGKTIVF----DMLGDIYTIPVSGGTAKALRTGIPFEIQPHFSPDGSKILFTSDAGGG 113

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMK 377
           + ++VM +NGSD K+I+++      +  W P G+  IA   F+       GE +   +  
Sbjct: 114 DNIWVMNANGSDAKQITKESFRLLNNSTWMPDGNAFIARKHFTSTRSLGAGEMWQYHITG 173

Query: 378 KDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSR--------KKDGDTGSKLYSID----LN 424
             G Q  +      ++  P+ SP GR L +S         + + D   ++Y I       
Sbjct: 174 GSGLQITKRKNAQQDVNEPSVSPDGRYLYYSEDVYPGGSFQYNKDPNKQIYVIKRYDFQT 233

Query: 425 GRNETLINTPAYASDPQ 441
           G+   +   P  AS PQ
Sbjct: 234 GKTTQITGGPGGASRPQ 250



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 21/180 (11%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRIS 342
           ++  +L +   +RLT         S+SPD  +IV+ +  +     +  +  NG +  ++S
Sbjct: 384 LWKKNLPNGTPKRLTQGTDFESEPSFSPDGKEIVYVTWNDLNLGTIRKISINGGNSMQLS 443

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSG---------EKFAIGVMKKDGSQERLLVEDSNLQ 393
            +K  S+  P +S  G  I + K  G         +   I  MK DGS  + +      +
Sbjct: 444 TEK-GSFRTPSFSLDGTHIVYRKERGNSDQGFTFAKNAGIYTMKADGSNSKFVTAQG--E 500

Query: 394 APTWSPSGRSLIFSRKKD--GDTGSKLYSIDLNGRNETLINTPAYAS------DPQWVGF 445
            P +S  G+ +         G     L+S++L G ++    T  YA+      D +W+ F
Sbjct: 501 YPIFSADGKRIFIQTGGTYFGSLTKALHSVNLQGNDKRTHFTSKYANRIVPSPDNKWIAF 560


>gi|62185544|ref|YP_220329.1| translocation protein TolB [Chlamydophila abortus S26/3]
 gi|81312309|sp|Q5L4R3|TOLB_CHLAB RecName: Full=Protein tolB; Flags: Precursor
 gi|62148611|emb|CAH64383.1| putative TolB protein [Chlamydophila abortus S26/3]
          Length = 427

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 137/310 (44%), Gaps = 20/310 (6%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           R+  H  +D I+ ++T   G  + +I+F     S    + +  L  +D DG N+R LT  
Sbjct: 122 RQKIHEAADKIHYALTSVPGISSGKIIFSLSKNSQDCELKQGELWSVDYDGGNLRPLT-Q 180

Query: 210 RDQILFEPRFSP--NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            + +   P +    +++   Y +Y    I +++L     +   K+I + +     P FS 
Sbjct: 181 ENSLSITPSWMHIGSKKPYLYVSYK-FGIPKIFLGSLE-NTTGKKILHLQGNQFMPAFSP 238

Query: 268 NGKR-ALIS-VQKDEAMDIYSVDLQSNATER----LTNTLFINISASYSPDSSQIVFESD 321
             K  A IS    +  + + S  L   A  +    L  T     + S+SPD S++VF S+
Sbjct: 239 RKKLLAFISDAYGNPDLFLQSFSLSQGAMGKPRRILNETFGTQGNPSFSPDGSKLVFVSN 298

Query: 322 REGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KD 379
           ++G+ +LY++Q +      R+   K  +   P WSP G  IAF         I V     
Sbjct: 299 KDGRPRLYILQIDPEMLSPRLLTKKYRNSSCPSWSPDGKKIAFCSVIKGVRQICVYDLAT 358

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDL-NGRNETLINTPAYA 437
           G   +L     + + P+W+   + L++S    G+TG S+LY + L   + + ++      
Sbjct: 359 GKDYQLTTTPVDKEGPSWAVDSQHLVYSA---GNTGESELYLLSLITQKTKKIVIGLGEK 415

Query: 438 SDPQWVGFMD 447
             P W GF D
Sbjct: 416 RFPSWGGFPD 425


>gi|301511542|ref|ZP_07236779.1| translocation protein TolB [Acinetobacter baumannii AB058]
          Length = 167

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 65/116 (56%), Gaps = 10/116 (8%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ--DWNSLGAQVLVTGRVIKEGKDRLR 125
           +V  DL RS  F      S  + +    +I + Q  DW + G   +VTG+ IK+  D   
Sbjct: 57  IVETDLNRSGRFT-----SSSKNLPANAAINQIQASDWQAAGIPYVVTGQ-IKQTADGFE 110

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFV 180
           V ++L+DV+ ++Q +  +  + PAS  R+  H +SD IYQ++TG  GDF+ RI +V
Sbjct: 111 VHYQLYDVQ-KQQYLLNELLNVPASRIRQAGHMVSDAIYQALTGIPGDFSGRIAYV 165


>gi|157959840|ref|YP_001499874.1| amidohydrolase [Shewanella pealeana ATCC 700345]
 gi|157844840|gb|ABV85339.1| amidohydrolase [Shewanella pealeana ATCC 700345]
          Length = 1066

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 15/153 (9%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NGK  +     D   DIY + +     + L   +   +   YSPD   I F SD +G 
Sbjct: 57  SPNGKHVVF----DLLGDIYQMPIAGGEAKPLAKGIAWQMQPVYSPDGKYIAFTSDEDGG 112

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMK 377
           + ++VMQ++GS+ + ++++       P WSP G  L+A   F+       GE +   V  
Sbjct: 113 DNIWVMQADGSNPRPVTKETFRLLNSPAWSPDGQYLVARKHFTGSRSLGAGEVWMYHVAG 172

Query: 378 KDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSR 408
            DG +  ER   E  +L  P +SP G  + FS+
Sbjct: 173 GDGVKLTER-PNEQKDLGEPAYSPDGHYIYFSQ 204



 Score = 40.4 bits (93), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 119/280 (42%), Gaps = 55/280 (19%)

Query: 208 PSRDQILFEPRFSPNQQKVAYAT---------YDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           P+  + L EP +SP+   + ++          Y  + +  +Y    +I R   + G+   
Sbjct: 182 PNEQKDLGEPAYSPDGHYIYFSQDSTPGKTFHYSKDSVKGIY----KIKRYDTQTGDIEV 237

Query: 259 MI------LAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTL---------- 301
           +I      + P  S +G + L  +++D     +Y +DL+S  TE+L   L          
Sbjct: 238 LIQGTGGAIRPTPSPDGNK-LAYIKRDGFQSSLYLLDLKSGETEKLYGELDRDMQETWAI 296

Query: 302 -FINISASYSPDSSQIVFES-------DREGK---EQLYVMQSNGSDQK--RISQDKEAS 348
             +  + S++ D+++I+F +       D E K   +  + +++  + Q   R +QD +  
Sbjct: 297 HGVYPTMSWTTDNNEILFWANGKINKLDVESKSVAQIPFTIKTERAIQPAVRFTQDLDKD 356

Query: 349 YFD------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPS 400
            FD         SP G  +AF      K  +  +  DG   RL   DS+L+   P WS  
Sbjct: 357 VFDVKMLRMAQVSPDGKKVAFEALG--KIWVKSL-PDGKMSRLTKLDSDLRELFPQWSRD 413

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           G+ ++F+   D + G+   +   N R + L + P    +P
Sbjct: 414 GKKVVFTTWDDQEQGTVSLANVRNKRVKVLTDEPGKYVEP 453



 Score = 39.7 bits (91), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 22/157 (14%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTK 365
           A  SPD  ++ FE+   GK  ++V         R+++ D +     P WS  G  + FT 
Sbjct: 366 AQVSPDGKKVAFEA--LGK--IWVKSLPDGKMSRLTKLDSDLRELFPQWSRDGKKVVFTT 421

Query: 366 FSG-EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG---------DT 414
           +   E+  + +      + ++L  E      PT+SP G ++++ + K G         +T
Sbjct: 422 WDDQEQGTVSLANVRNKRVKVLTDEPGKYVEPTFSPDGETVVYRKAKGGYITPRTWSQET 481

Query: 415 GSKLYSIDLNGRNETLINT----PAYASDPQWVGFMD 447
           G  LY +D++G   T I +    P + +D   V FM+
Sbjct: 482 G--LYQVDIDGDKNTKITSAGYQPQFGADNDRVYFME 516


>gi|145638708|ref|ZP_01794317.1| translocation protein TolB precursor [Haemophilus influenzae
           PittII]
 gi|145272303|gb|EDK12211.1| translocation protein TolB precursor [Haemophilus influenzae
           PittII]
          Length = 143

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 8/124 (6%)

Query: 215 FEPRFSPNQQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             P +SP+ Q++AY +++++    +++     TR     K + +F+    AP FS +G R
Sbjct: 1   MSPAWSPDGQRLAYVSFENKKSQLVVQDLNSGTR-----KVVASFQGHNGAPAFSPDGSR 55

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              +  +D  ++IY +        +LT+    N   ++SPD + I+F SDR G  Q+Y M
Sbjct: 56  LAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEPAWSPDGNSILFTSDRSGSPQVYRM 115

Query: 332 QSNG 335
            ++G
Sbjct: 116 DASG 119



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 58/105 (55%), Gaps = 3/105 (2%)

Query: 261 LAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           ++P +S +G+R A +S +  ++  +   DL S   + + +    N + ++SPD S++ F 
Sbjct: 1   MSPAWSPDGQRLAYVSFENKKSQLVVQ-DLNSGTRKVVASFQGHNGAPAFSPDGSRLAFA 59

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S R+G   +YVM +NG    +++     +  +P WSP G+ I FT
Sbjct: 60  SSRDGVLNIYVMGANGGTPTQLTS-GAGNNTEPAWSPDGNSILFT 103



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 4/129 (3%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S ++SPD  ++ + S    K QL V   N S  +++    +     P +SP G  +AF 
Sbjct: 1   MSPAWSPDGQRLAYVSFENKKSQLVVQDLN-SGTRKVVASFQGHNGAPAFSPDGSRLAFA 59

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I VM  +G     L   + N   P WSP G S++F+  + G    ++Y +D 
Sbjct: 60  SSRDGVLNIYVMGANGGTPTQLTSGAGNNTEPAWSPDGNSILFTSDRSGSP--QVYRMDA 117

Query: 424 NGRNETLIN 432
           +G + T++ 
Sbjct: 118 SGGSATVVG 126


>gi|329848102|ref|ZP_08263130.1| WD40-like Beta Propeller Repeat family protein [Asticcacaulis
           biprosthecum C19]
 gi|328843165|gb|EGF92734.1| WD40-like Beta Propeller Repeat family protein [Asticcacaulis
           biprosthecum C19]
          Length = 501

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 31/229 (13%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  ++  T + +++  +  FSP+ +++  +   + D        +RI   P   G  R  
Sbjct: 275 GTPVKLETGALNKMNNDHGFSPDGKEIVVSDQTEPD------NQSRIHILPAAGGTPR-- 326

Query: 260 ILAPR-------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           ++ P        +S +GK      Q+    D+YS+ +      RLT T  ++  A YS D
Sbjct: 327 LVTPNGPSYWHGWSPDGKTLAYIAQRGGDYDVYSIPVGGGPETRLTTTPGLDDGAEYSAD 386

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              I F S R G  +L+ M+S+GS  ++++   ++  + P  SP G  IAF  F G   A
Sbjct: 387 GQWIYFNSVRSGNMKLWRMKSDGSGAEQLTFGDDSRDWFPHPSPDGKWIAFIAF-GTDVA 445

Query: 373 IG-----------VMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIF 406
           +G           +M   G +  +L         +  P+WSP  + + F
Sbjct: 446 VGDHPANKDVELRLMPAAGGEAVVLAWLFGGQGTINVPSWSPDSKKIAF 494



 Score = 40.0 bits (92), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 9/80 (11%)

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LI 431
           I ++   G   RL+  +       WSP G++L +  ++ GD    +YSI + G  ET L 
Sbjct: 315 IHILPAAGGTPRLVTPNGPSYWHGWSPDGKTLAYIAQRGGDY--DVYSIPVGGGPETRLT 372

Query: 432 NTPA------YASDPQWVGF 445
            TP       Y++D QW+ F
Sbjct: 373 TTPGLDDGAEYSADGQWIYF 392


>gi|254483262|ref|ZP_05096494.1| hypothetical protein GPB2148_301 [marine gamma proteobacterium
           HTCC2148]
 gi|214036485|gb|EEB77160.1| hypothetical protein GPB2148_301 [marine gamma proteobacterium
           HTCC2148]
          Length = 342

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 21/212 (9%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--KRIGNFRSMILAPRFSSNGKRA 272
             P F+PN + + +++  D       L   R D A    +I +  S    P  +S+G+  
Sbjct: 127 LTPAFTPNGRFLIFSS--DRSGESQSLWRKRSDGAGGITQITSSNSFDWQPAIASDGETI 184

Query: 273 LISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--ESDREGKEQL 328
           +    +  ++A  I+S+++      +LT       S S SPD  +IVF       GK+Q+
Sbjct: 185 IFQSHRKNNQAASIWSINMNGGLLTQLTE----GRSPSISPDGRRIVFVRPDASTGKDQV 240

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFA---IGVMKKDGS 381
           + MQ +GS   ++S    A+  DP W P G  I F        G+ FA   I +M+ DG+
Sbjct: 241 WSMQVDGSGLTQLSS-GNANDVDPSWHPNGRYIVFASDAMVVQGDVFADYNIWIMRADGT 299

Query: 382 QERLLVED-SNLQAPTWSPSGRSLIFSRKKDG 412
           Q   L E+ S+  AP +   GR+++F   + G
Sbjct: 300 QREQLTENFSHDDAPVFDRRGRTIVFRSNRGG 331



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/235 (24%), Positives = 112/235 (47%), Gaps = 32/235 (13%)

Query: 231 YDDEDILRVYL-------MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM- 282
           YDD++ + V+        +DT       R+ N + +      S+   R  +S  +D  + 
Sbjct: 40  YDDDEFVAVFTPKSTTAALDTTDG---PRVTNLKQLTNNTERSNQYNRPALSPNQDAMVY 96

Query: 283 --------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQS 333
                    IY   L S A   +++   +N++ +++P+   ++F SDR G+ Q L+  +S
Sbjct: 97  VEFAGGKSSIYRQSLGSPAKSPISSDAGMNLTPAFTPNGRFLIFSSDRSGESQSLWRKRS 156

Query: 334 NGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVED 389
           +G+    I+Q   ++ FD  P  +  G+ I F     + +  +I  +  +G    LL + 
Sbjct: 157 DGAGG--ITQITSSNSFDWQPAIASDGETIIFQSHRKNNQAASIWSINMNGG---LLTQL 211

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTP-AYASDPQW 442
           +  ++P+ SP GR ++F R  D  TG  +++S+ ++G   T +++  A   DP W
Sbjct: 212 TEGRSPSISPDGRRIVFVR-PDASTGKDQVWSMQVDGSGLTQLSSGNANDVDPSW 265



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 94/217 (43%), Gaps = 20/217 (9%)

Query: 202 NIRYLT--PSRDQILFEPRFSPNQQKVAYATY--DDEDILRVYLMDTRIDRAPKRIGNFR 257
           N++ LT    R      P  SPNQ  + Y  +      I R  L       A   I +  
Sbjct: 68  NLKQLTNNTERSNQYNRPALSPNQDAMVYVEFAGGKSSIYRQSLGSP----AKSPISSDA 123

Query: 258 SMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQ 315
            M L P F+ NG+  + S  +  E+  ++      +    ++T++   +   + + D   
Sbjct: 124 GMNLTPAFTPNGRFLIFSSDRSGESQSLWRKRSDGAGGITQITSSNSFDWQPAIASDGET 183

Query: 316 IVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF 371
           I+F+S R+  +   ++ +  NG    ++++ +      P  SP G  I F +   S  K 
Sbjct: 184 IIFQSHRKNNQAASIWSINMNGGLLTQLTEGRS-----PSISPDGRRIVFVRPDASTGKD 238

Query: 372 AIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFS 407
            +  M+ DGS   +L   ++N   P+W P+GR ++F+
Sbjct: 239 QVWSMQVDGSGLTQLSSGNANDVDPSWHPNGRYIVFA 275


>gi|167946736|ref|ZP_02533810.1| TolB [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 163

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 9/141 (6%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +++ K    DIY  D  +    ++T    I+   ++SPD   IVF SDR GK Q+Y   S
Sbjct: 1   MTLSKGGNPDIYVFDFTTRKLRQITRHYAIDTEPAWSPDGRSIVFTSDRGGKPQIYKTPS 60

Query: 334 NGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            G   +R+    S +  ASY     +P G  +A       ++ I  ++ D    ++L   
Sbjct: 61  YGGKAERVTFQNSYNARASY-----APDGKSLAMVTRENGQYRIATLQLDSGVMQVLSRG 115

Query: 390 SNLQAPTWSPSGRSLIFSRKK 410
           S  ++P+++P+G  +I++ KK
Sbjct: 116 SLDESPSFAPNGSMIIYASKK 136


>gi|85710151|ref|ZP_01041216.1| hypothetical protein NAP1_14738 [Erythrobacter sp. NAP1]
 gi|85688861|gb|EAQ28865.1| hypothetical protein NAP1_14738 [Erythrobacter sp. NAP1]
          Length = 1096

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 70/138 (50%), Gaps = 11/138 (7%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +      R+ + L   +   +SPD ++I F SDR G + ++VM  +GSD+++++
Sbjct: 71  DIYTMPIAGGTPRRIADGLAWEVQPRFSPDGTKIAFTSDRGGGDNIWVMNVDGSDKRQVT 130

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFSGEKFA----IGVMKKDGSQERLLVEDSN------ 391
           ++       P WSP G  +IA   F+  + A    I +    G     +VE ++      
Sbjct: 131 KESFRLLNQPYWSPDGRFIIAKKHFTTSRSAGTGEIWMYHVSGGGGVAIVERADEALQKE 190

Query: 392 LQAPTWSPSGRSLIFSRK 409
           L  P +SP G ++ ++R 
Sbjct: 191 LGEPVFSPDGEAIYYTRN 208



 Score = 44.7 bits (104), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 38/239 (15%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   +A+    D     +Y M       P+RI +  +  + PRFS +G +   +  + 
Sbjct: 58  SPDGSTIAFNLLGD-----IYTMPI-AGGTPRRIADGLAWEVQPRFSPDGTKIAFTSDRG 111

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIV----FESDRE-GKEQLYVMQS 333
              +I+ +++  +   ++T   F  ++  Y SPD   I+    F + R  G  ++++   
Sbjct: 112 GGDNIWVMNVDGSDKRQVTKESFRLLNQPYWSPDGRFIIAKKHFTTSRSAGTGEIWMYHV 171

Query: 334 NGSDQ----KRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLV 387
           +G       +R  +  +    +PV+SP G+ I +T+ +  G +F   +  +D       +
Sbjct: 172 SGGGGVAIVERADEALQKELGEPVFSPDGEAIYYTRNTTPGNQF---IYAQDSQTGIFAI 228

Query: 388 EDSNLQA---------------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           E  +L+                PT SP G  + F R +D DT S+L+  DL    E +I
Sbjct: 229 ERHDLETGEVTTAVDGYGGAVRPTPSPDGTEMAFVR-RDKDT-SQLWVKDLATGAERMI 285



 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 62/158 (39%), Gaps = 41/158 (25%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-- 367
           SPD +Q+VFES      +LY   + G D  R              + +G +  F  FS  
Sbjct: 372 SPDGTQVVFES----LGRLYTKSARGRDAPRPLTG----------AAEGTIEGFLAFSRD 417

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAP-------------TWSPSGRSLIFSRKKDGDT 414
           G + A  V   D    R++  D+N Q P             TWSP GR + + ++  G  
Sbjct: 418 GSRIAY-VEWTDEDLGRIITADANGQNPRAITSEPGHYGDLTWSPDGRHIAYEKRGGGFL 476

Query: 415 GSKLYS-------IDLNGRNETLI----NTPAYASDPQ 441
            S  YS       I  NG     +    + P + SDP+
Sbjct: 477 TSPAYSETTGIYMIPSNGGEPMRVSRSGSNPQFGSDPE 514


>gi|320161703|ref|YP_004174928.1| hypothetical protein ANT_23020 [Anaerolinea thermophila UNI-1]
 gi|319995557|dbj|BAJ64328.1| hypothetical protein ANT_23020 [Anaerolinea thermophila UNI-1]
          Length = 645

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 81/163 (49%), Gaps = 6/163 (3%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+ ++  E + +++   +     RLT T +  +  S SPD +++ F S + G   L+++ 
Sbjct: 102 LLFMRDGERIHLFAYHPKFLPLTRLTRTAWDEMHPSLSPDGNRLAFTSHQNGYWDLFILD 161

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERL-LVEDS 390
               + ++I+Q  E     P WSP G  +A+  +  E+  I +    D SQ  + L +D 
Sbjct: 162 LTTGETQQITQSPEYE-GAPTWSPDGQWLAYEAYRNEQLDIYLQSLNDLSQPPIQLTDDP 220

Query: 391 NLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              + P WSP GR++ F   + GD  ++++  +L+   E  +N
Sbjct: 221 AADSDPAWSPGGRTIAFVSTRTGD--AEIWLANLDKPEERFVN 261



 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 5/158 (3%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           + P  S +G R   +  ++   D++ +DL +  T+++T +     + ++SPD   + +E+
Sbjct: 134 MHPSLSPDGNRLAFTSHQNGYWDLFILDLTTGETQQITQSPEYEGAPTWSPDGQWLAYEA 193

Query: 321 DREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            R  +  +Y+   N   Q  I   D  A+  DP WSP G  IAF         I +   D
Sbjct: 194 YRNEQLDIYLQSLNDLSQPPIQLTDDPAADSDPAWSPGGRTIAFVSTRTGDAEIWLANLD 253

Query: 380 GSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGD 413
             +ER +    + ++    P WS  GR L ++ +K+ +
Sbjct: 254 KPEERFVNISRDPRSADLNPVWSNDGRYLAYATRKESE 291


>gi|116625575|ref|YP_827731.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228737|gb|ABJ87446.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 652

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 38/220 (17%)

Query: 260 ILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNAT-ER--LTNTLFINISASYSPDS 313
           +   + S +G+    +VQ+   DE   I  + +   AT ER  LT+    +    +SPDS
Sbjct: 33  VAGAQISPDGRYVAYTVQQANWDENDFISQIWIAVTATGERYQLTSGKKSSTGPQWSPDS 92

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--------- 364
            ++ F SDR+GK Q+Y++  NG +   ++ + E       WSP G  IAFT         
Sbjct: 93  HRLAFTSDRDGKRQIYLISPNGGEAIALTSE-ENGVSAIAWSPDGASIAFTSSGPDAKPR 151

Query: 365 KFSGEKFA-IGVMKKDGSQERLL---VEDSNLQAP-------------TWSPSGRSLIFS 407
           K   EK+    +++ D +   L    V D+  +A              +WSP G+ + F+
Sbjct: 152 KDRKEKYGEFEIIEHDYTMSHLWLIKVADNKPKATALTSGDKFSVGAFSWSPDGKRIAFA 211

Query: 408 RKKDGDTGSK----LYSIDLNGRN-ETLINTPAYASDPQW 442
             +D D GS+    +Y +DL   + + L+++P   S+P+W
Sbjct: 212 AGRDPDLGSQDTESIYVLDLADLHVKKLLDSPGPHSNPKW 251



 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 68/165 (41%), Gaps = 25/165 (15%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQKR 340
            D +  AT   +   F   + S+SPD  +I F + R      +  E +YV+       K+
Sbjct: 179 ADNKPKATALTSGDKFSVGAFSWSPDGKRIAFAAGRDPDLGSQDTESIYVLDLADLHVKK 238

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTK-------FSGEKFAIGVMKKDGSQERLLV----ED 389
           +  D    + +P WSP G  IAFT        F   ++ I V+  DG Q RLL     ED
Sbjct: 239 L-LDSPGPHSNPKWSPNGREIAFTTSNSVPNFFYANRY-IAVIPADGGQPRLLTKDFDED 296

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            NL    W+  G     S+K    T +  + ID   R    I  P
Sbjct: 297 PNLL--EWADDGIYFGASQK----TAAHTFRIDPATRAIRRITGP 335


>gi|119469520|ref|ZP_01612424.1| hypothetical protein ATW7_06673 [Alteromonadales bacterium TW-7]
 gi|119447055|gb|EAW28325.1| hypothetical protein ATW7_06673 [Alteromonadales bacterium TW-7]
          Length = 1061

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +      +LT+ +   +   +SPD   I F SD+ G + ++VM  NG +Q  ++
Sbjct: 73  DIYTMPMSGGTATQLTSDIAWQMQPRFSPDGKHIAFTSDQGGGDNIWVMDLNGENQSAVT 132

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFSGEK----FAIGVMKKDGSQERLLVEDSN----LQ 393
            +       P WSP GD L+A   F+  +      + +  K G +   L +  N    L 
Sbjct: 133 NETFRLLNSPAWSPDGDFLVARKHFTASRSLGAGEVWLYHKAGGKGVQLTKRENDQKDLG 192

Query: 394 APTWSPSGRSLIFSR 408
            P +SP GR + FS 
Sbjct: 193 EPMFSPDGRYVYFSH 207



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 24/193 (12%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIV-- 317
           + PRFS +GK    +  +    +I+ +DL       +TN  F  + S ++SPD   +V  
Sbjct: 95  MQPRFSPDGKHIAFTSDQGGGDNIWVMDLNGENQSAVTNETFRLLNSPAWSPDGDFLVAR 154

Query: 318 --FESDRE-GKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS--GEK 370
             F + R  G  ++++    G    +++  ++ +    +P++SP G  + F+  +  G+ 
Sbjct: 155 KHFTASRSLGAGEVWLYHKAGGKGVQLTKRENDQKDLGEPMFSPDGRYVYFSHDATPGKT 214

Query: 371 F------AIGVMK------KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           F        G+ K      + G  E ++        PT SP G++L + ++ D  T   L
Sbjct: 215 FHYSKDSVAGIYKIKRYDRETGEIETIIDGMGGAIRPTPSPDGKTLAYIKRDDFQT--SL 272

Query: 419 YSIDLNGRNETLI 431
           Y  DL+    T +
Sbjct: 273 YLYDLSTGEHTQV 285



 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 9/113 (7%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMD-IYSVDLQSNATERLT-NTLFINISASYSPDSSQI 316
           M+   + S +G+ A+      EA+  IY  DL+S   +RLT  T    +   YS D  +I
Sbjct: 365 MLRNVQVSPDGETAIF-----EALGYIYKRDLESGKIKRLTKQTDHFELFPQYSRDGKKI 419

Query: 317 VFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           V+ +  + K+ Q+ V+ S       I+Q+    Y +P +SP G  + + K SG
Sbjct: 420 VYTTWSDNKQGQVRVVSSRSGRGDTITQEP-GKYVEPTFSPNGKTVVYRKASG 471



 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 98/248 (39%), Gaps = 34/248 (13%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D +   I+ LT   D     P++S + +K+ Y T+ D    +V ++ +R  R    I   
Sbjct: 390 DLESGKIKRLTKQTDHFELFPQYSRDGKKIVYTTWSDNKQGQVRVVSSRSGRG-DTITQE 448

Query: 257 RSMILAPRFSSNGKRALISVQKDEAM---------DIYSVDLQSNATERLTNTLFINISA 307
               + P FS NGK  +       ++          IYSV  +   +E ++ + +     
Sbjct: 449 PGKYVEPTFSPNGKTVVYRKASGGSILNPKWSLNPGIYSVSAKGGKSELISKSGY---QP 505

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
            +  D+ + VF      K  L V++       ++ + + A+ F    SP G+ +AF +  
Sbjct: 506 QFGADNDR-VFVMSPWPKPSLSVVELESKKVSKLYESEHATEFRV--SPDGEYLAFAERF 562

Query: 367 ---------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                    SG+   IG        E+L V     ++ +WS     L ++       G +
Sbjct: 563 KVYVTPLVESGKAINIGPKDSKFPIEQLSVRAG--ESISWSADSSKLYWT------LGPE 614

Query: 418 LYSIDLNG 425
           LY   LNG
Sbjct: 615 LYHASLNG 622



 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 15/94 (15%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGD 413
           SP G  I F         I  M   G     L  D   Q  P +SP G+ + F+  + G 
Sbjct: 60  SPDGKTIVFDLLG----DIYTMPMSGGTATQLTSDIAWQMQPRFSPDGKHIAFTSDQGG- 114

Query: 414 TGSKLYSIDLNGRNET--------LINTPAYASD 439
            G  ++ +DLNG N++        L+N+PA++ D
Sbjct: 115 -GDNIWVMDLNGENQSAVTNETFRLLNSPAWSPD 147


>gi|262199569|ref|YP_003270778.1| beta-propeller repeat-containing to-pal system protein TolB
           [Haliangium ochraceum DSM 14365]
 gi|262082916|gb|ACY18885.1| beta-propeller repeat-containing to-pal system protein TolB
           [Haliangium ochraceum DSM 14365]
          Length = 362

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 121/296 (40%), Gaps = 21/296 (7%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           + +T ++GD         +  +  I    L  + ++   +  L+  R   L  PR     
Sbjct: 70  RQLTKDEGDEYPAAAIPGQDALLVIAARDLGDVHKEQLQLVRLSGERVGSLHAPRGRSRN 129

Query: 224 QKVA------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             VA       A  D E    +  M    +   + I + ++    P  S +G +      
Sbjct: 130 PSVAPDGSWLVAESDAEGFSNLVRMTPAPEAEARSIQDAKAGSFEPSISPDGTQIAFVSS 189

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D   ++Y  D Q     RLT+    + +  +SPD   I F S+RE + ++++++ +GS 
Sbjct: 190 RDGDPELYLSDAQGQDVRRLTHFHLEDWAPQWSPDGRYIAFLSNREKRARVFLIRPDGSG 249

Query: 338 QKRIS-QDKEASYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDS 390
            + +S         D  W P+G  + F       K    K  IG    D   E + + D 
Sbjct: 250 TRAVSGMAATGDERDIAWHPEGGSLVFVGRMDDGKTRLWKVEIG---DDAVGEPVALTDG 306

Query: 391 NLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWV 443
           + +   P WSP G+ L+F  +++G+T   LY +  +G  +T L   P     P+W+
Sbjct: 307 SSRDDQPAWSPDGKYLVFVSEREGNT--DLYLMRADGSGQTRLTEAPGADWLPRWL 360


>gi|94987134|ref|YP_595067.1| periplasmic component of the Tol biopolymer transport system
           [Lawsonia intracellularis PHE/MN1-00]
 gi|94731383|emb|CAJ54746.1| Periplasmic component of the Tol biopolymer transport system
           [Lawsonia intracellularis PHE/MN1-00]
          Length = 452

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 153/351 (43%), Gaps = 22/351 (6%)

Query: 100 FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTI 158
           F+ +   G+ +L+T    K       VE RL++    K + G  +     S    IA   
Sbjct: 106 FKRFQLAGSDLLITVGWPKGDHSDSSVELRLYETYSGKFVFGTAYSGVVKSEISNIADKF 165

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
             D+ +++TG    F S + FV +   +G     + ++   G  +R +T      +  P 
Sbjct: 166 CADLMKTLTGSGDFFLSTLAFVKQG--NGKNVRDVWLVKPTGKELRQITDISGTAM-SPS 222

Query: 219 FSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRALI 274
           +S + + + +   DD    L V+      DR   +I   R   + ++ P F  + K A +
Sbjct: 223 WSIDGRFIVFTHLDDRSHALGVW------DRLTNKIQRIRFPGNTVIGPVFMPDNKVA-V 275

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S+   +  DI+ +D      + L  +  IN+S S+    +++ F S+R    Q+++   +
Sbjct: 276 SLSTGKYPDIFLLDHTFQKEKVLEESPAINVSPSFDAKGTKMAFCSNRLSNPQIFMKDFS 335

Query: 335 GSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNL 392
                R+S  ++  Y  +P  SP G LIAF++ + +   I V     G + ++     N 
Sbjct: 336 SGQVSRVS--RQGCYNTEPTMSPDGTLIAFSRLTDDGNRIFVQDLLTGIERQVTFGPGND 393

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQW 442
           + P+++P    + F+  + G    ++Y I  +G +   I T    AS P+W
Sbjct: 394 EQPSFAPDSYFIAFTSTRSGK--KQIYLITRHGGDAKQIPTGHGDASFPRW 442


>gi|40063481|gb|AAR38281.1| amidohydrolase domain protein [uncultured marine bacterium 581]
          Length = 1101

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 28/199 (14%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G R +     D   D+YSV L   +   LT  +  N   ++SPD  +I F SDR+G 
Sbjct: 54  SPDGTRVIF----DMLGDLYSVPLSGGSVTALTEGIEWNFQPTFSPDGKRIAFVSDRDGN 109

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIG---VMKKDG 380
           + ++VM  +G++  +++ +++ +  +P WSP    IA  K   SG     G   +   +G
Sbjct: 110 DNIWVMDIDGTNVTQVTSERKHNLHNPAWSPDSQWIAVRKGTVSGRSIPSGEIWMYHVNG 169

Query: 381 SQERLLVEDSN-------LQAPTWSPSGRSLIFSR--------KKDGDTGSKLYSI---D 422
                +V +++       +  P +SP G  L +S+        + + D+  ++++I   D
Sbjct: 170 GSGIEVVNNTDGTRAQKSIAEPAFSPDGDYLYYSQDTTSGWVWQYNKDSTGEIFAIRRLD 229

Query: 423 L-NGRNETLINTPAYASDP 440
           L  G  +T+   P  A  P
Sbjct: 230 LTTGEIDTITGGPGGAVRP 248



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 21/181 (11%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPR 264
           LT  RD   + P  S + Q+V Y +++D+++ RV ++  +    P R +       + P+
Sbjct: 400 LTEQRDHFEYWPALSADGQQVVYTSWNDQNLGRVKVVSAK--GGPSRTLVKTPGHYVQPK 457

Query: 265 FSSNGKRA---------LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           FS +G+           L+S        IY V  +     ++++        ++S D S+
Sbjct: 458 FSPDGEMVVYRKTTGGYLLSPLWSVEPGIYLVKTEGGTPIKISSA---GHHPTFSADGSR 514

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           ++F +  E   +L+ +   G D++ I+Q ++ + +    SP G+ +AFT    E F + V
Sbjct: 515 VLFTTRGEKGLELHSVDHMGLDKRVIAQGEKVTSY--AVSPDGNWLAFT----EHFRVYV 568

Query: 376 M 376
           M
Sbjct: 569 M 569



 Score = 37.0 bits (84), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 45/194 (23%), Positives = 82/194 (42%), Gaps = 26/194 (13%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQI-VFES 320
           P FS +GKR      +D   +I+ +D+      ++T+    N+ + ++SPDS  I V + 
Sbjct: 91  PTFSPDGKRIAFVSDRDGNDNIWVMDIDGTNVTQVTSERKHNLHNPAWSPDSQWIAVRKG 150

Query: 321 DREGKE----QLYVMQSNGSDQKRISQDKEA-----SYFDPVWSPQGDLIAFTK------ 365
              G+     ++++   NG     +  + +      S  +P +SP GD + +++      
Sbjct: 151 TVSGRSIPSGEIWMYHVNGGSGIEVVNNTDGTRAQKSIAEPAFSPDGDYLYYSQDTTSGW 210

Query: 366 -------FSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                   +GE FAI  +    G  + +         PT SP G  L F ++   D  S 
Sbjct: 211 VWQYNKDSTGEIFAIRRLDLTTGEIDTITGGPGGAVRPTPSPDGSKLAFVKRLP-DFNSA 269

Query: 418 LYSIDLNGRNETLI 431
           +   DL    ET++
Sbjct: 270 IVIRDLTSGMETIV 283


>gi|218780129|ref|YP_002431447.1| hypothetical protein Dalk_2286 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761513|gb|ACL03979.1| WD40 domain protein beta Propeller [Desulfatibacillum alkenivorans
           AK-01]
          Length = 310

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 13/196 (6%)

Query: 213 ILFEPRFSPNQQKVAYATYD--DEDILRVYLMDTRID--RAPKRIGNFRSMILAPRFSSN 268
           I  +P ++P   ++A+  Y     D   ++ +    D  R P++I  F  M+  P +S +
Sbjct: 115 IYAQPTWAPAGFELAFVEYTAVPADAAEIFSIKKEGDIFRLPEKITKFPPMMTFPSYSPD 174

Query: 269 GK-RALISVQKDEAM----DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           GK  A  S ++D  +    +I  +DL++ +  +LT+    +    +SPD S++ + S+ E
Sbjct: 175 GKLMACASFKRDPVLGVIEEIIVIDLKTGSQSQLTHDGADSFFPVWSPDGSKLAYTSNLE 234

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           G   ++ +     ++ R++  +  SY  +P WSP G  IAF         I  +   G+ 
Sbjct: 235 GNFDIWAVSYPKGEKTRLT--RSPSYDGEPSWSPDGSRIAFISSRSGHREIWTIDAGGAD 292

Query: 383 ERLLVE-DSNLQAPTW 397
            R + E  S    P W
Sbjct: 293 SRQVTELKSTCSHPCW 308



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 99/240 (41%), Gaps = 21/240 (8%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDT---RIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           P  SP  + +AY +   +    + +MD+     D     +G +     AP          
Sbjct: 78  PAVSPGGKHIAYVSGRKQ----IRIMDSLTGEADTVNLPLGIYAQPTWAPAGFELAFVEY 133

Query: 274 ISVQKDEAMDIYSVDLQSN---ATERLTNTLFINISASYSPDSSQIVFESDREGK----- 325
            +V  D A +I+S+  + +     E++T    +    SYSPD   +   S +        
Sbjct: 134 TAVPAD-AAEIFSIKKEGDIFRLPEKITKFPPMMTFPSYSPDGKLMACASFKRDPVLGVI 192

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQER 384
           E++ V+      Q +++ D   S+F PVWSP G  +A+T      F I  V    G + R
Sbjct: 193 EEIIVIDLKTGSQSQLTHDGADSFF-PVWSPDGSKLAYTSNLEGNFDIWAVSYPKGEKTR 251

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWV 443
           L    S    P+WSP G  + F   + G    ++++ID  G +   +    +  S P WV
Sbjct: 252 LTRSPSYDGEPSWSPDGSRIAFISSRSGH--REIWTIDAGGADSRQVTELKSTCSHPCWV 309


>gi|268316197|ref|YP_003289916.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Rhodothermus marinus DSM 4252]
 gi|262333731|gb|ACY47528.1| peptidase S9B dipeptidylpeptidase IV domain protein [Rhodothermus
           marinus DSM 4252]
          Length = 1028

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 17/168 (10%)

Query: 261 LAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNAT-ERLTNTL---------FINISASY 309
           LAP  S +G+      ++D   +D++  D ++     RL+++          FIN S S+
Sbjct: 298 LAPALSPDGRYVAFLSERDLFTIDLFVADAETGKVLRRLSSSASDPHFDAIRFINSSGSW 357

Query: 310 SPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD  +  F +  +G  ++ +     G  ++RI+ +   +  +  WSP G  IAF+  SG
Sbjct: 358 SPDGQRFAFITFAQGNNEIAIWNLRKGKLERRIAVEGVGAIHNLAWSPDGRTIAFSGLSG 417

Query: 369 EKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIF--SRKKDG 412
               + ++  + +Q R L +D  ++LQ P WSP GR++ F   R  DG
Sbjct: 418 GISDLYLLDLETNQVRKLTDDRYADLQ-PAWSPDGRTIAFVSDRGPDG 464



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 117/271 (43%), Gaps = 42/271 (15%)

Query: 189 IKNSLCVMDRD-----GANIRYLTPSRD--QILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +KN+   + +D      A  + L P  D  +I   P  SP+ + VA+ +  D   + +++
Sbjct: 265 VKNTYLPLLKDRTPPEQAGRKVLAPDLDAGEINLAPALSPDGRYVAFLSERDLFTIDLFV 324

Query: 242 MDTRIDRAPKRIGNFRS--MILAPRF-------SSNGKR-ALIS-VQKDEAMDIYSVDLQ 290
            D    +  +R+ +  S     A RF       S +G+R A I+  Q +  + I+  +L+
Sbjct: 325 ADAETGKVLRRLSSSASDPHFDAIRFINSSGSWSPDGQRFAFITFAQGNNEIAIW--NLR 382

Query: 291 SNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
               ER      +    + ++SPD   I F     G   LY++    +  ++++ D+ A 
Sbjct: 383 KGKLERRIAVEGVGAIHNLAWSPDGRTIAFSGLSGGISDLYLLDLETNQVRKLTDDRYAD 442

Query: 349 YFDPVWSPQGDLIAFT-------------KFSGEKFAIGVMKKDGSQERLLVEDSNLQA- 394
              P WSP G  IAF              ++  E+ A+  +  +  + R+L    N Q  
Sbjct: 443 -LQPAWSPDGRTIAFVSDRGPDGTDFEILRYGHERLAL--LDLETGKVRVLRPFRNGQQI 499

Query: 395 -PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            P +SP GRSL F    DG     +Y +DLN
Sbjct: 500 NPQFSPDGRSLYFISNHDGF--KDIYRMDLN 528



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 68/154 (44%), Gaps = 16/154 (10%)

Query: 303 INISASYSPDSSQIVFESDRE-GKEQLYVMQS-NGSDQKRISQDKEASYFDPV------- 353
           IN++ + SPD   + F S+R+     L+V  +  G   +R+S      +FD +       
Sbjct: 296 INLAPALSPDGRYVAFLSERDLFTIDLFVADAETGKVLRRLSSSASDPHFDAIRFINSSG 355

Query: 354 -WSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRK 409
            WSP G   AF  F+    + AI  ++K   + R+ VE    +    WSP GR++ FS  
Sbjct: 356 SWSPDGQRFAFITFAQGNNEIAIWNLRKGKLERRIAVEGVGAIHNLAWSPDGRTIAFSGL 415

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQW 442
             G   S LY +DL       +    YA   P W
Sbjct: 416 SGGI--SDLYLLDLETNQVRKLTDDRYADLQPAW 447


>gi|42523526|ref|NP_968906.1| component of the Tol biopolymer transport system [Bdellovibrio
           bacteriovorus HD100]
 gi|39575732|emb|CAE79899.1| component of the Tol biopolymer transport system [Bdellovibrio
           bacteriovorus HD100]
          Length = 974

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 23/170 (13%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----------- 327
           D++ D++S DL     +RLT     +   SYSPD   I F S+R G  +           
Sbjct: 158 DDSYDVFSSDLSGKNIQRLTREKGYDAEGSYSPDGQWIAFASNRAGYSEKLEGEDKKLFE 217

Query: 328 --------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMK 377
                   +Y+M+++G+  KR++ D +     P +S  G  I + +FS  G    I  M 
Sbjct: 218 QDPSYMMDIYIMKADGTQVKRLT-DSKGYDGGPFFSADGKKITWRRFSPNGSTAEIFTMN 276

Query: 378 KDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            DGS+++ + +  ++  AP + PSG  +IF     G    +L+ +D  G+
Sbjct: 277 VDGSEQKQVTKLKSMSWAPYFHPSGDYIIFGSSVLGYHNFELFIVDAEGK 326


>gi|83814657|ref|YP_446340.1| MdsD protein, putative [Salinibacter ruber DSM 13855]
 gi|294508278|ref|YP_003572336.1| MdsD protein, [Salinibacter ruber M8]
 gi|83756051|gb|ABC44164.1| MdsD protein, putative [Salinibacter ruber DSM 13855]
 gi|294344606|emb|CBH25384.1| MdsD protein, putative [Salinibacter ruber M8]
          Length = 1092

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 88/214 (41%), Gaps = 29/214 (13%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           AP    +    +  P    +G R   S Q D    +++V +   A ERLT          
Sbjct: 32  APTSAQDADPFVRHPAVHPDGDRIAFSYQGD----LWTVPVDGGAPERLTIHEAYEGEPR 87

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI------- 361
           + PD  +I F SDR G + LYVM + GS   R++           W+P G L+       
Sbjct: 88  WGPDGDRIAFTSDRFGNDDLYVMDAAGSTPTRLTHHSTGDAIG-GWTPTGKLLFTTRRTY 146

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR------KK--DGD 413
           A  ++S E +A  V    G+ +R L  D+   AP  SP GR + F R      KK  +G 
Sbjct: 147 AQAEWSDEIYA--VDGDGGTPDRRL--DAVGSAPRMSPDGRFIAFERGYNDITKKGYEGP 202

Query: 414 TGSKLYSIDLNGRNETLINTPAYASD---PQWVG 444
               ++  D    N+T      YA +   P W G
Sbjct: 203 ADRNVWVYDT--ENDTYTQVTTYAGNDHTPVWTG 234


>gi|295689246|ref|YP_003592939.1| amidohydrolase [Caulobacter segnis ATCC 21756]
 gi|295431149|gb|ADG10321.1| amidohydrolase [Caulobacter segnis ATCC 21756]
          Length = 1055

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 78/159 (49%), Gaps = 13/159 (8%)

Query: 262 APRFSSNGKRALISVQKDE---AMDIYS----VDLQSNATERLTNTLFINISASYSPDSS 314
           +P  ++ G     +V  D    A D+Y+    V ++     RLT+ ++      +SPD S
Sbjct: 47  SPVTATEGTNICATVSPDGRTVAFDVYAMLWLVPIEGGPARRLTDEIYEIAQPDWSPDGS 106

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFA 372
            + F+S R+G   ++ +   G+D + + Q  + ++   +P WSP G  IAF+   G ++ 
Sbjct: 107 TLAFQSYRDGNFHVWTI---GADGRGLMQRTKGAFDCREPRWSPDGKTIAFSSDRGGRYG 163

Query: 373 IGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           + ++    G+         +   P+WSP G+S++F+  K
Sbjct: 164 VHLLDVASGAITPFSTGPGDEFEPSWSPDGKSVVFTVDK 202



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 13/150 (8%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T T   NI A+ SPD   + F+        L+++   G   +R++ D+      P WSP
Sbjct: 49  VTATEGTNICATVSPDGRTVAFDV----YAMLWLVPIEGGPARRLT-DEIYEIAQPDWSP 103

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPSGRSLIFSRKKDG 412
            G  +AF  +    F +  +  DG   R L++ +    + + P WSP G+++ FS  + G
Sbjct: 104 DGSTLAFQSYRDGNFHVWTIGADG---RGLMQRTKGAFDCREPRWSPDGKTIAFSSDRGG 160

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             G  L  +  +G        P    +P W
Sbjct: 161 RYGVHLLDV-ASGAITPFSTGPGDEFEPSW 189



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 20/202 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQK 278
           SP+ + VA+  Y         L    I+  P +R+ +    I  P +S +G        +
Sbjct: 62  SPDGRTVAFDVY-------AMLWLVPIEGGPARRLTDEIYEIAQPDWSPDGSTLAFQSYR 114

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D    ++++        + T   F      +SPD   I F SDR G+  ++++       
Sbjct: 115 DGNFHVWTIGADGRGLMQRTKGAFDCREPRWSPDGKTIAFSSDRGGRYGVHLLDVASGAI 174

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--------VEDS 390
              S       F+P WSP G  + FT    +K  I V   DG++  +            +
Sbjct: 175 TPFSTGP-GDEFEPSWSPDGKSVVFTV---DKVRIDVQGLDGARRTVAKVKPSADRFNAA 230

Query: 391 NLQAPTWSPSGRSLIFSRKKDG 412
           +L +P ++P GR ++F+  ++G
Sbjct: 231 SLASPAFTPDGRDVVFTAIENG 252



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 7/148 (4%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + +P  S +G++ +     D    +Y +D+       L    F  +  ++SPD   + + 
Sbjct: 333 VGSPALSPDGRQVVFRALND----LYLLDIGGGPATALIKDAFYKVDPAWSPDGKTLAYS 388

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +D+ GK  +++  +   + +++++   A+     WS  G  IAF   +G  F + V    
Sbjct: 389 TDKGGKLDIWLRDTASGESRQLTRFDGAA-VSSAWSRDGKSIAFLNQNGGLFVVDVAS-- 445

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           G   R+  +      PTW P  R++ ++
Sbjct: 446 GQTRRVYGDLWEPGKPTWGPGDRTIAYA 473



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 33/226 (14%)

Query: 204 RYLTPSRDQI---------LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           RY+  SRD +         +  P  SP+ ++V +   +D     +YL+D     A   I 
Sbjct: 314 RYVKKSRDFLSAKTRPVVGVGSPALSPDGRQVVFRALND-----LYLLDIGGGPATALIK 368

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +    +  P +S +GK    S  K   +DI+  D  S  + +LT      +S+++S D  
Sbjct: 369 DAFYKV-DPAWSPDGKTLAYSTDKGGKLDIWLRDTASGESRQLTRFDGAAVSSAWSRDGK 427

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------- 367
            I F +   G   L+V+       +R+  D       P W P    IA+  F        
Sbjct: 428 SIAFLNQNGG---LFVVDVASGQTRRVYGDLWEP-GKPTWGPGDRTIAYAAFKPYSARFR 483

Query: 368 ---GEKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPSGRSLIF 406
               E   + V    G+ + +L + S        P WSP G+SL +
Sbjct: 484 EGLSEILTVDVESGKGTYQPILPDRSLGTRGDDGPVWSPDGKSLAY 529



 Score = 43.1 bits (100), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 48/109 (44%), Gaps = 8/109 (7%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFT 364
           S + SPD  Q+VF +       LY++   G     + +D  A Y  DP WSP G  +A++
Sbjct: 335 SPALSPDGRQVVFRA----LNDLYLLDIGGGPATALIKD--AFYKVDPAWSPDGKTLAYS 388

Query: 365 KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDG 412
              G K  I +      + R L   D    +  WS  G+S+ F  +  G
Sbjct: 389 TDKGGKLDIWLRDTASGESRQLTRFDGAAVSSAWSRDGKSIAFLNQNGG 437


>gi|116624613|ref|YP_826769.1| periplasmic component of the Tol biopolymer transporter-like
           protein [Candidatus Solibacter usitatus Ellin6076]
 gi|116227775|gb|ABJ86484.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 538

 Score = 63.2 bits (152), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 23/191 (12%)

Query: 258 SMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           ++  +P  S++G+ A  +  +D   +++Y   + S    RLT T       ++SPDS  +
Sbjct: 43  ALTASPAISADGQLAAYASDRDARNLELYVQPIPSGMPVRLTRTPEDESEPAFSPDSGSL 102

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            F S++ G   +YVM + G D K ++Q       DP +SP G  IA+     ++ A  V+
Sbjct: 103 AFRSEK-GGGGIYVMPARGGDAKLLAQGGR----DPRYSPDGKWIAYW----DQDAAWVI 153

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLIN 432
             +G   R +      + P WSP G +L+ ++  +    G  G       + GR +    
Sbjct: 154 PSNGGTARKIFATPGARHPIWSPDG-ALVLAQANNEFVVGAVGVAPAPAGIPGRLQ---- 208

Query: 433 TPAYASDPQWV 443
               A  PQW 
Sbjct: 209 ----ADSPQWT 215


>gi|116625879|ref|YP_828035.1| transcriptional regulatory protein-like protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116229041|gb|ABJ87750.1| transcriptional regulatory protein-like protein [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 370

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 73/157 (46%), Gaps = 10/157 (6%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDL------QSNATERLTNTLFINISASYSPDSSQI 316
           P  S  G R L  V+     +I+ +DL       S    +L  + + + +  YSPD +++
Sbjct: 71  PAISRTGHR-LAYVRSTFDTNIWRLDLPREPNSSSGHPLKLIASTWRDNNPQYSPDGTKV 129

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            F SDR G   L+V  ++GS   +++     S   P WSP G  IAF  F+     I V+
Sbjct: 130 AFVSDRAGSLDLWVTNADGSSPFQLTSQGAQS--TPRWSPDGRRIAFASFANSNENIFVI 187

Query: 377 KKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             +G   + +    +N  +P WS  GR + F+  + G
Sbjct: 188 DAEGGATKPITTGPANHNSPCWSSDGRWIYFTSNRTG 224



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 82/176 (46%), Gaps = 7/176 (3%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P++SP+  KVA+ + D    L +++  T  D +       +     PR+S +G+R   + 
Sbjct: 120 PQYSPDGTKVAFVS-DRAGSLDLWV--TNADGSSPFQLTSQGAQSTPRWSPDGRRIAFAS 176

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +   +I+ +D +  AT+ +T     + S  +S D   I F S+R GK +++   + G 
Sbjct: 177 FANSNENIFVIDAEGGATKPITTGPANHNSPCWSSDGRWIYFTSNRTGKAEIWRAPAEGG 236

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            +   SQ      + P  SP G +I + K   E  AI  +  +G  E  ++E + +
Sbjct: 237 SE---SQMTHQGGWAPQESPDGKMIYYQKQFSET-AIWKIPPEGGVESPVLESATV 288



 Score = 43.1 bits (100), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           +P +SP G  +AF         + V   DGS    L        P WSP GR + F+   
Sbjct: 119 NPQYSPDGTKVAFVSDRAGSLDLWVTNADGSSPFQLTSQGAQSTPRWSPDGRRIAFA--S 176

Query: 411 DGDTGSKLYSIDLNGRNETLI-------NTPAYASDPQWVGF 445
             ++   ++ ID  G     I       N+P ++SD +W+ F
Sbjct: 177 FANSNENIFVIDAEGGATKPITTGPANHNSPCWSSDGRWIYF 218


>gi|157373159|ref|YP_001471759.1| amidohydrolase [Shewanella sediminis HAW-EB3]
 gi|157315533|gb|ABV34631.1| amidohydrolase [Shewanella sediminis HAW-EB3]
          Length = 1081

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 13/152 (8%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NGK  +     D   DIY + ++    + L   +   +   YSPD   I F SD +G 
Sbjct: 62  SPNGKHIVF----DMLGDIYQIPMKGGEAKVLAKGIAWQMQPVYSPDGKYIAFTSDEDGG 117

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMK 377
           + ++VM+++GS+ + ++++       P WSP    L+A   F+       GE +   V  
Sbjct: 118 DNIWVMEADGSNPRAVTEETFRLLNSPAWSPDSQYLVARKHFTGSRSLGAGEVWMYHVAG 177

Query: 378 KDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSR 408
            +G +  +   E  +L  P +SP GR + FS+
Sbjct: 178 GEGVKLTKRPNEQKDLGEPAYSPDGRYIYFSQ 209



 Score = 43.5 bits (101), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 116/283 (40%), Gaps = 57/283 (20%)

Query: 208 PSRDQILFEPRFSPNQQKVAYAT---------YDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           P+  + L EP +SP+ + + ++          Y  + +  +Y    +I R   + G+   
Sbjct: 187 PNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVKGIY----KIKRYDTQTGDIEV 242

Query: 259 MI------LAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTL---------- 301
           +I      + P  S +GK+ L  +++D     +Y +DL+S  TE+L   L          
Sbjct: 243 LIEGTGGAIRPTPSPDGKK-LAYIKRDGFQSSLYMLDLRSGETEKLYGKLDRDMQETWAI 301

Query: 302 -FINISASYSPDSSQIVFES-------DREGKEQLYV-----MQSNGSDQKRISQDKEAS 348
             +  + S++ D+ +IVF +       D E K    +      Q +     R +QD +  
Sbjct: 302 HGVYPTMSWTGDNEEIVFWAGGKINKLDVESKSVKQIPFSIKTQLDVQPAVRFTQDLDKD 361

Query: 349 YFD------PVWSPQGDLIAFTKFSGEKFAIGVM---KKDGSQERLLVEDSNLQA--PTW 397
            FD         SP G  + +      K  +  +   K DG + RL   DS L+   P W
Sbjct: 362 KFDVKMLRMAQVSPDGKKVVYEALG--KLWVKSLSDGKSDGKRTRLTKLDSELRELFPQW 419

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           S  G+S++F+   D + GS       N R +TL   P    +P
Sbjct: 420 SRDGKSIVFTTWDDLEQGSVRVVSLRNKRVKTLTKEPGKYVEP 462



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 48/213 (22%), Positives = 93/213 (43%), Gaps = 25/213 (11%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVY---LMDTRIDRAPKRIGNFRSMI--LAPRFS 266
           ++L   + SP+ +KV Y     E + +++   L D + D    R+    S +  L P++S
Sbjct: 366 KMLRMAQVSPDGKKVVY-----EALGKLWVKSLSDGKSDGKRTRLTKLDSELRELFPQWS 420

Query: 267 SNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG- 324
            +GK  + +   D E   +  V L++   + LT      +  ++SPD S +V+   + G 
Sbjct: 421 RDGKSIVFTTWDDLEQGSVRVVSLRNKRVKTLTKEPGKYVEPTFSPDGSFVVYRKAKGGY 480

Query: 325 --------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                   +  LY + + G +  +I+ D     + P +  + D + F    GE   +  +
Sbjct: 481 ITPRSWSQETGLYRVDTKGKENIKITPDG----YQPQFGAESDRVYFMDH-GETPELASI 535

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             DG Q+R+     +      SP G+ L F+ +
Sbjct: 536 NLDGFQKRVHYTSKHATEFRVSPDGKQLAFAER 568



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 69/159 (43%), Gaps = 22/159 (13%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAF 363
           A  SPD  ++V+E+   GK  +  +    SD KR      D E     P WS  G  I F
Sbjct: 371 AQVSPDGKKVVYEA--LGKLWVKSLSDGKSDGKRTRLTKLDSELRELFPQWSRDGKSIVF 428

Query: 364 TKFSG-EKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG--------- 412
           T +   E+ ++ V+  ++   + L  E      PT+SP G  +++ + K G         
Sbjct: 429 TTWDDLEQGSVRVVSLRNKRVKTLTKEPGKYVEPTFSPDGSFVVYRKAKGGYITPRSWSQ 488

Query: 413 DTGSKLYSIDLNGRNETLINT----PAYASDPQWVGFMD 447
           +TG  LY +D  G+    I      P + ++   V FMD
Sbjct: 489 ETG--LYRVDTKGKENIKITPDGYQPQFGAESDRVYFMD 525


>gi|226226607|ref|YP_002760713.1| hypothetical protein GAU_1201 [Gemmatimonas aurantiaca T-27]
 gi|226089798|dbj|BAH38243.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 997

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 13/172 (7%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           P FS +GK+   + Q+     +Y +D++S N  +R+   L   +S S+SPD  ++VF   
Sbjct: 382 PSFSLDGKQLAFTGQRGGRDVLYIMDVKSRNIVKRIDLELDQVLSPSFSPDGRKVVFSGM 441

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG- 380
           R G   LYV+  +     ++ +D+      P WSP G  IAF    G    + ++K    
Sbjct: 442 RHGSSDLYVVSLDAPGYTQLMKDQYGDLM-PQWSPDGKTIAFISDRGPDTDLDILKIGAW 500

Query: 381 --------SQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                   +Q+  ++     +A  P W+P G+SL +   + G     LY  D
Sbjct: 501 KVVTFDLETQQMTILPGQGGRAINPQWAPDGKSLAYVTDRTGIANIFLYDFD 552



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 15/169 (8%)

Query: 208 PSRDQILF---EPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           P  +Q+ F   +P FS + +++A+       D+L  Y+MD +     KRI      +L+P
Sbjct: 370 PDFEQLRFIYSQPSFSLDGKQLAFTGQRGGRDVL--YIMDVKSRNIVKRIDLELDQVLSP 427

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G++ + S  +  + D+Y V L +    +L    + ++   +SPD   I F SDR 
Sbjct: 428 SFSPDGRKVVFSGMRHGSSDLYVVSLDAPGYTQLMKDQYGDLMPQWSPDGKTIAFISDRG 487

Query: 324 GKEQLYVMQSNG---------SDQKRISQDKEASYFDPVWSPQGDLIAF 363
               L +++            + Q  I   +     +P W+P G  +A+
Sbjct: 488 PDTDLDILKIGAWKVVTFDLETQQMTILPGQGGRAINPQWAPDGKSLAY 536



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 92/219 (42%), Gaps = 27/219 (12%)

Query: 251 KRIGNFRSMILAPRFSSNGKR----ALISVQKDEAM-DIYSVDLQSNA-TERLTNTL--- 301
           KR G+  +M +AP  S++GK        S+ + E   ++Y  + ++     RL  T    
Sbjct: 311 KRTGSIANMFVAPALSNDGKFITYIGYGSLLRGEVFPEMYLANAETGKRITRLVKTTTNP 370

Query: 302 ------FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVW 354
                 FI    S+S D  Q+ F   R G++ LY+M     +  KRI  + +     P +
Sbjct: 371 DFEQLRFIYSQPSFSLDGKQLAFTGQRGGRDVLYIMDVKSRNIVKRIDLELD-QVLSPSF 429

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGD 413
           SP G  + F+        + V+  D      L++D      P WSP G+++ F   +  D
Sbjct: 430 SPDGRKVVFSGMRHGSSDLYVVSLDAPGYTQLMKDQYGDLMPQWSPDGKTIAFISDRGPD 489

Query: 414 T--------GSKLYSIDLNGRNETLI-NTPAYASDPQWV 443
           T          K+ + DL  +  T++      A +PQW 
Sbjct: 490 TDLDILKIGAWKVVTFDLETQQMTILPGQGGRAINPQWA 528


>gi|15618691|ref|NP_224977.1| translocation protein TolB [Chlamydophila pneumoniae CWL029]
 gi|15836315|ref|NP_300839.1| translocation protein TolB [Chlamydophila pneumoniae J138]
 gi|16752259|ref|NP_445627.1| translocation protein TolB [Chlamydophila pneumoniae AR39]
 gi|33242141|ref|NP_877082.1| translocation protein TolB [Chlamydophila pneumoniae TW-183]
 gi|6647886|sp|Q9Z7C4|TOLB_CHLPN RecName: Full=Protein tolB; Flags: Precursor
 gi|4377091|gb|AAD18920.1| macromolecule transporter [Chlamydophila pneumoniae CWL029]
 gi|7190004|gb|AAF38861.1| tolB protein, putative [Chlamydophila pneumoniae AR39]
 gi|8979155|dbj|BAA98990.1| macromolecule transporter [Chlamydophila pneumoniae J138]
 gi|33236651|gb|AAP98739.1| TolB precursor [Chlamydophila pneumoniae TW-183]
 gi|269302571|gb|ACZ32671.1| tolB protein-like protein [Chlamydophila pneumoniae LPCoLN]
          Length = 431

 Score = 63.2 bits (152), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 70/307 (22%), Positives = 128/307 (41%), Gaps = 20/307 (6%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPS 209
           R+  H  +D ++ ++TG  G    +I+F   S+     + +  L   D DG N+  LT +
Sbjct: 121 RQKIHHAADTVHYALTGIPGISAGKIVFALSSLGKDQKLKQGELWTTDYDGKNLAPLT-T 179

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              +   P++        Y     +  +    + +  +   K++   +   L P FS   
Sbjct: 180 ECSLSITPKWVGVGSNFPYLYVSYKYGVPKIFLGSLENTEGKKVLPLKGNQLMPTFSP-- 237

Query: 270 KRALISVQKDEA----MDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESD 321
           ++ L++   D      + I    L S    R    L  N     + S++P+ SQ+VF S+
Sbjct: 238 RKKLLAFVADTYGNPDLFIQPFSLTSGPMGRPRRLLNENFGTQGNPSFNPEGSQLVFISN 297

Query: 322 REGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KD 379
           ++G+ +LY+M  +   Q  R+   K  +   P WSP G  IAF         I +     
Sbjct: 298 KDGRPRLYIMSLDPEPQAPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICIYDLSS 357

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-----P 434
           G   +L    +N ++P+W+   R L+FS     ++   L S+     N+  I       P
Sbjct: 358 GEDYQLTTSPTNKESPSWAIDSRHLVFSAGNAEESELYLISLVTKKTNKIAIGVGEKRFP 417

Query: 435 AYASDPQ 441
           ++ + PQ
Sbjct: 418 SWGAFPQ 424


>gi|295702778|ref|YP_003595853.1| putative peptidase [Bacillus megaterium DSM 319]
 gi|294800437|gb|ADF37503.1| putative peptidase [Bacillus megaterium DSM 319]
          Length = 659

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 7/117 (5%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDS 313
           +  P+ S +GK  + +V++ + ++      ++ +D+++  T+RLT     N S ++SPD 
Sbjct: 20  VYNPQISPDGKSVVYTVRETKKIENAYETQLFMLDIETKETKRLTYYKGNNHSPAWSPDG 79

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             I F SDR    QLY++   G + + ++ D E    +PVWSP  D I F+   GEK
Sbjct: 80  KWIAFLSDRSQAVQLYLLAVAGGEAEALT-DLEKGVSNPVWSPYSDEIMFSTKVGEK 135



 Score = 43.1 bits (100), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 10/108 (9%)

Query: 310 SPDSSQIVFESDREGKE-------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           SPD   +V+ + RE K+       QL+++     + KR++  K  ++  P WSP G  IA
Sbjct: 26  SPDGKSVVY-TVRETKKIENAYETQLFMLDIETKETKRLTYYKGNNH-SPAWSPDGKWIA 83

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
           F     +   + ++   G +   L + +  +  P WSP    ++FS K
Sbjct: 84  FLSDRSQAVQLYLLAVAGGEAEALTDLEKGVSNPVWSPYSDEIMFSTK 131



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 45/212 (21%), Positives = 91/212 (42%), Gaps = 29/212 (13%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVY-----LMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           ++ P+ SP+ + V Y   + + I   Y     ++D    +  KR+  ++    +P +S +
Sbjct: 20  VYNPQISPDGKSVVYTVRETKKIENAYETQLFMLDIET-KETKRLTYYKGNNHSPAWSPD 78

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           GK       + +A+ +Y + +     E LT+      +  +SP S +I+F S + G++ +
Sbjct: 79  GKWIAFLSDRSQAVQLYLLAVAGGEAEALTDLEKGVSNPVWSPYSDEIMF-STKVGEKAV 137

Query: 329 YVMQSNGSDQ----KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            V Q++   Q    +R+    +AS +                 GE   + V+K    +  
Sbjct: 138 RVEQNHEYPQPYEVERLLYKSDASGY---------------LKGEYAQVAVVKLKNKEVT 182

Query: 385 LLVEDS-NLQAPTWSPSGRSLIF--SRKKDGD 413
            L +   +     WSP   S++F  SR ++ D
Sbjct: 183 FLTDGPYHHSVGCWSPDTNSIVFCSSRGENPD 214


>gi|114570230|ref|YP_756910.1| amidohydrolase [Maricaulis maris MCS10]
 gi|114340692|gb|ABI65972.1| amidohydrolase [Maricaulis maris MCS10]
          Length = 1062

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 17/139 (12%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +   A   +++ L   I   +SPD SQI F SDR G + +++M  +G + ++++
Sbjct: 70  DIYTMPVSGGAATNVSSGLPWEIQPRFSPDGSQIAFTSDRAGGDNIWIMDVDGGNVRQLT 129

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVEDSN--- 391
           ++      +  W P G  IA  K         +GE +   V+   G Q   LVE  N   
Sbjct: 130 EESFRLLNNAAWHPSGRYIAARKHFTTTRSAGTGEIWFYHVLGGGGVQ---LVERPNENF 186

Query: 392 ---LQAPTWSPSGRSLIFS 407
              L  P +SP GR L ++
Sbjct: 187 QKELGEPVFSPDGRYLYYT 205



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 57/109 (52%), Gaps = 7/109 (6%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
           A+ SPD SQIV+E+      QL+V  ++G + +R+++D        P WS  G  IAF  
Sbjct: 368 ATASPDGSQIVYET----LGQLWVRAADGGEPRRLTRDDGTRREMMPTWSADGRTIAFAT 423

Query: 366 FSGEKFA-IGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG 412
           +  +    I  +   G +ER+L  +  + + P +SP G +++F +   G
Sbjct: 424 WDDDALGSIRTISVRGGRERVLTSQPGHYRNPRFSPDGETVVFEKGSGG 472


>gi|116252434|ref|YP_768272.1| TolB-like protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115257082|emb|CAK08176.1| putative TolB-like protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 275

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 13/156 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G++      +D+  DIY++ +   A  RLT+    N    YS D   I F S R G
Sbjct: 116 WSPDGRQLAYCGIRDDLFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYFNSSRTG 175

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVM 376
             Q++ +  +G+  ++++ D + ++F    SP  D++    +    F         + +M
Sbjct: 176 LMQIWRIHPDGTGLEQVTSDNQGNWFAHP-SPNNDMVLLLSYDPSVFDHPRDLDVRLRLM 234

Query: 377 KKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
             DG   + L E       +  P WSP G    + R
Sbjct: 235 DMDGGNLKTLFELFGGQGTINVPCWSPDGEEFAYVR 270



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 33/158 (20%), Positives = 71/158 (44%), Gaps = 12/158 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ +++AY    D D+  +Y +      A  R+ +       P +S++G+    +  +
Sbjct: 116 WSPDGRQLAYCGIRD-DLFDIYTISVD-GGAETRLTHGEGRNDGPDYSADGQWIYFNSSR 173

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--------VFESDREGKEQLYV 330
              M I+ +       E++T+    N  A  SP++  +        VF+  R+   +L +
Sbjct: 174 TGLMQIWRIHPDGTGLEQVTSDNQGNWFAHPSPNNDMVLLLSYDPSVFDHPRDLDVRLRL 233

Query: 331 MQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKF 366
           M  +G + K + +    + +   P WSP G+  A+ ++
Sbjct: 234 MDMDGGNLKTLFELFGGQGTINVPCWSPDGEEFAYVRY 271



 Score = 40.8 bits (94), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 19/151 (12%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAF- 363
           + ++SPD S ++   D      LY +  +G +  ++      +   D   SP G  I   
Sbjct: 27  APNFSPDGSYLLLNGD----GLLYRLPLDGGEVVKVDTGFAVNCNNDHGISPDGTKIVIS 82

Query: 364 --TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             T+F   K AI  +  +G   RL+ E+       WSP GR L +   +  D    +Y+I
Sbjct: 83  DKTEFG--KSAIYTLPIEGGTPRLITENLPSYWHGWSPDGRQLAYCGIR--DDLFDIYTI 138

Query: 422 DLNGRNETLI-------NTPAYASDPQWVGF 445
            ++G  ET +       + P Y++D QW+ F
Sbjct: 139 SVDGGAETRLTHGEGRNDGPDYSADGQWIYF 169


>gi|315126925|ref|YP_004068928.1| hypothetical protein PSM_A1853 [Pseudoalteromonas sp. SM9913]
 gi|315015439|gb|ADT68777.1| hypothetical protein PSM_A1853 [Pseudoalteromonas sp. SM9913]
          Length = 1057

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +      ++T+ +   +   +SPD   I F SD+ G + +++M  NG +Q  ++
Sbjct: 70  DIYTMPMSGGKATKITSDIAWQMQPRFSPDGKHIAFTSDQGGGDNIWIMDVNGENQTAVT 129

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFSGEK----FAIGVMKKDGSQERLLVEDSN----LQ 393
            +       P WSP GD L+A   F+  +      + +  K G +   L +  N    L 
Sbjct: 130 DETFRLLNSPAWSPDGDYLVARKHFTASRSLGAGEVWLYHKAGGKGVQLTKRENDQKDLG 189

Query: 394 APTWSPSGRSLIFSR 408
            P +SP GR + FS 
Sbjct: 190 EPMFSPDGRYVYFSH 204



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 40/183 (21%), Positives = 81/183 (44%), Gaps = 22/183 (12%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIV-- 317
           + PRFS +GK    +  +    +I+ +D+       +T+  F  + S ++SPD   +V  
Sbjct: 92  MQPRFSPDGKHIAFTSDQGGGDNIWIMDVNGENQTAVTDETFRLLNSPAWSPDGDYLVAR 151

Query: 318 --FESDRE-GKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS--GEK 370
             F + R  G  ++++    G    +++  ++ +    +P++SP G  + F+  +  G+ 
Sbjct: 152 KHFTASRSLGAGEVWLYHKAGGKGVQLTKRENDQKDLGEPMFSPDGRYVYFSHDATPGKT 211

Query: 371 F------AIGVMK------KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           F        G+ K      + G  E ++        PT SP G+ L + ++ D  T   L
Sbjct: 212 FHYSKDSVAGIYKIKRYDRETGDIETIISGMGGAIRPTPSPDGKKLAYIKRDDFQTSLYL 271

Query: 419 YSI 421
           Y +
Sbjct: 272 YDL 274



 Score = 36.6 bits (83), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 15/94 (15%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGD 413
           SP G+ + F         I  M   G +   +  D   Q  P +SP G+ + F+  + G 
Sbjct: 57  SPDGETLVFDLLG----DIYTMPMSGGKATKITSDIAWQMQPRFSPDGKHIAFTSDQGG- 111

Query: 414 TGSKLYSIDLNGRNET--------LINTPAYASD 439
            G  ++ +D+NG N+T        L+N+PA++ D
Sbjct: 112 -GDNIWIMDVNGENQTAVTDETFRLLNSPAWSPD 144


>gi|300712709|ref|YP_003738522.1| periplasmic component of the Tol biopolymer transport system
           [Halalkalicoccus jeotgali B3]
 gi|299126393|gb|ADJ16731.1| periplasmic component of the Tol biopolymer transport system
           [Halalkalicoccus jeotgali B3]
          Length = 1046

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 115/265 (43%), Gaps = 43/265 (16%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           Q +  PR SP+ + VA+   +D     ++LM  RI + P+RI +       P +S +G+ 
Sbjct: 349 QGILTPRLSPDGEHVAFIALND-----LWLM--RIGQPPQRITDDSFYQADPAWSPDGRY 401

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S  ++   D+Y  DLQ+   +++T      ++A++SPD S+I F++  + +  L   
Sbjct: 402 VTYSSDENGTQDLYVHDLQTGENQQVTARDDAVVAATWSPDGSKIAFQN--QHRTTLIAE 459

Query: 332 QSNGSDQKRISQDKEA--SYF---DPVWSPQGDLIAFT--KFSGEKFAIGVMK------- 377
                ++  +S  +EA    F    P WS  G+ +A    K   ++F  G  +       
Sbjct: 460 VERSENEIELSDGQEAIRPLFLPGRPTWSADGNTVAVAAVKQYSDRFRSGTSQILTVDIE 519

Query: 378 -------KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR---- 426
                    G + + L    N   P WSP GR + F  +    +  ++  +D  G     
Sbjct: 520 TGEETFYPPGEEFKSLSTRGN-DGPVWSPDGRWMAFVVE----STLRVMPVDEAGEPTGP 574

Query: 427 ----NETLINTPAYASDPQWVGFMD 447
                E   + P ++ D +W+ +++
Sbjct: 575 ATQITEEATDAPTWSGDSEWLLYLN 599



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/169 (20%), Positives = 80/169 (47%), Gaps = 14/169 (8%)

Query: 216 EPRFSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +P ++P+  ++A+  Y D   DI  +    + I +      + R     P++S +G +  
Sbjct: 105 QPDYAPDGARIAFQGYGDGNFDIWTMAADGSDIQQITDGFWDDRK----PQWSPDGTQIA 160

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------- 326
            S  ++E  DI++VD+++   ++ T+    N   ++SPD ++I + +D  G+        
Sbjct: 161 FSSDRNENYDIWTVDIETGDLQQWTDDSSENFEPTWSPDGTEIAYVADPTGEYGDGDDSP 220

Query: 327 -QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             +  +  +G  +  +S     +   P WSP G+ +A+ + + ++   G
Sbjct: 221 ITIEAVNQDGETRTLVSGQMGQTLHSPSWSPNGEDLAYVRINEQENRTG 269


>gi|269837252|ref|YP_003319480.1| WD40 domain-containing protein beta Propeller [Sphaerobacter
           thermophilus DSM 20745]
 gi|269786515|gb|ACZ38658.1| WD40 domain protein beta Propeller [Sphaerobacter thermophilus DSM
           20745]
          Length = 332

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 7/110 (6%)

Query: 309 YSPDSSQIVF------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +SPD  +IVF      E+D +   QL+V+  N      + +  E +Y DP WSP G  IA
Sbjct: 183 FSPDGQRIVFAQRTTGENDLQRWTQLWVVDLNTEQLFPLVETNEGAY-DPAWSPDGRWIA 241

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           +T  +G +  I V+  +G     L    N++APTWSP G  + F +   G
Sbjct: 242 YTGRTGAENDIWVVPAEGGTPIRLTNFGNVRAPTWSPDGSWIAFLQTDGG 291



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 29/166 (17%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------QDKEASY-------FDPVWS 355
           +S D S+ VF    +    LY+  ++GS  ++++      Q    +Y        DPVWS
Sbjct: 77  WSGDGSRFVFVRTGDAFSDLYIANADGSGMEQLTFYQPPIQPGTEAYIREAMWALDPVWS 136

Query: 356 PQGDLIAFTKFSGE-KFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKK 410
             GD IAF       K  + +M   G     +        N++ P +SP G+ ++F+++ 
Sbjct: 137 RAGDAIAFVSDRNTLKNFLWLMPAPGENPYQIQASTYNGENVEHPDFSPDGQRIVFAQRT 196

Query: 411 DGDT----GSKLYSIDLNGRNE-TLINT------PAYASDPQWVGF 445
            G+      ++L+ +DLN      L+ T      PA++ D +W+ +
Sbjct: 197 TGENDLQRWTQLWVVDLNTEQLFPLVETNEGAYDPAWSPDGRWIAY 242



 Score = 40.0 bits (92), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 8/115 (6%)

Query: 263 PRFSSNGKRALISVQKDEAMDI------YSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P FS +G+R + + +     D+      + VDL +     L  T       ++SPD   I
Sbjct: 181 PDFSPDGQRIVFAQRTTGENDLQRWTQLWVVDLNTEQLFPLVETNEGAYDPAWSPDGRWI 240

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            +      +  ++V+ + G    R++         P WSP G  IAF +  G  F
Sbjct: 241 AYTGRTGAENDIWVVPAEGGTPIRLTNFGNVRA--PTWSPDGSWIAFLQTDGGSF 293


>gi|262198463|ref|YP_003269672.1| peptidase S41 [Haliangium ochraceum DSM 14365]
 gi|262081810|gb|ACY17779.1| peptidase S41 [Haliangium ochraceum DSM 14365]
          Length = 1167

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 104/219 (47%), Gaps = 22/219 (10%)

Query: 233 DEDILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +E  L +Y+ D  + R  + +    +  S  L+P    +GKRAL   + D    +++V +
Sbjct: 348 EERKLSIYVPDDGLSRQSEWVSAGQHIESFSLSP----DGKRALFVGRGD----LFTVPV 399

Query: 290 QSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEA 347
           +      L++T   +   AS+ PD S +V+ SD  G+E+L+V+   G S  +++++    
Sbjct: 400 EHGLVRNLSHTPNAHEREASWMPDGSHVVYVSDWSGEEELWVVDQRGQSPARQLTKGNGG 459

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLI 405
             ++P +SP G  +A++   G  F   V+   G Q   + ++   +A    WSP G+ L 
Sbjct: 460 RLYEPRFSPDGRHVAYSDHRGRIF---VIPAAGGQPLEVADEPFGRADDYRWSPDGQFLA 516

Query: 406 FSRKKDGDTG-SKLYSIDLNGRNETLINTPAY-ASDPQW 442
           FS     DTG S +Y   +  R    I  P +    P W
Sbjct: 517 FSLSD--DTGLSSIYIWGMRDRRLRRITGPEFDEGSPVW 553



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 10/163 (6%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            S +++VS+   SG  +  L V+D+ G +  R LT      L+EPRFSP+ + VAY+ + 
Sbjct: 424 GSHVVYVSD--WSG--EEELWVVDQRGQSPARQLTKGNGGRLYEPRFSPDGRHVAYSDHR 479

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQS 291
               +        ++ A +  G         R+S +G+    S+  D  +  IY   ++ 
Sbjct: 480 GRIFVIPAAGGQPLEVADEPFGRADDY----RWSPDGQFLAFSLSDDTGLSSIYIWGMRD 535

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               R+T   F   S  + P    I F S RE + Q+  ++ N
Sbjct: 536 RRLRRITGPEFDEGSPVWHPGGEHIFFLSRREFQPQIGQLEWN 578



 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 40/189 (21%), Positives = 72/189 (38%), Gaps = 28/189 (14%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D++          RLT    + +   +SPD   I F     G EQ+YV+   G   ++
Sbjct: 99  AGDLWLARTSGGTAARLTAHPGLELFPKFSPDGQWIAFTGQYGGDEQVYVISVGGGTPRQ 158

Query: 341 ISQ-------DKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMK------KDGSQERL 385
           ++             Y + V  W+P G  + F     + + +G  +        G    L
Sbjct: 159 LTYYPARGPLPARWGYDNQVYGWTPDGTQVLFRSLR-DSYDVGSSRLYTAAVSGGMPSPL 217

Query: 386 LVEDSNLQAPTWSPSGRSLIFS---------RKKDGDTGSKLYSIDL-NGRNETLINTPA 435
            + ++   A   SP G+ +++S         ++  G     LY  D+ N   + + + P 
Sbjct: 218 PMPEAGAGA--LSPDGKRVVYSPLFRDFRTWKRYAGGWAQDLYVFDIDNTSVQRITDDPR 275

Query: 436 YASDPQWVG 444
              DP W+G
Sbjct: 276 VDRDPMWIG 284


>gi|294146610|ref|YP_003559276.1| putative amidohydrolase [Sphingobium japonicum UT26S]
 gi|292677027|dbj|BAI98544.1| putative amidohydrolase [Sphingobium japonicum UT26S]
          Length = 992

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 2/153 (1%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           KRI ++ +    P +S +G R      +D   D++++    +   +LT   + +   ++S
Sbjct: 82  KRITDYFNDARQPVWSPDGSRLAYFAYRDGGYDLWTIKPDGSDMRKLTQGAWDDREPAWS 141

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   I F SDR G   ++ +       K++S +       P WSP G  IA+    G K
Sbjct: 142 PDGRTIAFSSDRSGNYDIWTLDVASGAVKQVSSNPREDRM-PSWSPDGASIAYAGIDGGK 200

Query: 371 FAI-GVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            A+      DG +  L      + AP++ P+G+
Sbjct: 201 TALYATTVADGKESLLKQVAGRVDAPSYGPTGQ 233



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/186 (28%), Positives = 81/186 (43%), Gaps = 18/186 (9%)

Query: 260 ILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           I+ P  S +G R A +++      D+Y +  +  A E LT    ++   ++SPD   I +
Sbjct: 321 IVHPTISPDGSRIAFVALG-----DLYLMSSKGGAPENLTRDAALDADPAWSPDGQSIAY 375

Query: 319 ESDREGK-EQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            SD+ G   QL++     G D+K  S D +       WSP G  IAF    G     GV 
Sbjct: 376 TSDKGGGLPQLWMRDLKTGKDRKLTSIDTQP--LGAAWSPDGSRIAFLDVDGRWGVAGVC 433

Query: 377 KKD---GSQERLLVEDSNLQAPTWSPSGR--SLIFSRKKDG---DTGSKLYSIDLNGRNE 428
             D   G   RL        +PTWSP G+  ++  S K      +  +++Y I  +G+ E
Sbjct: 434 VVDVATGKITRLQASLGQPGSPTWSPDGKYVAIALSYKYSNSFREGTNQIYVIPADGKGE 493

Query: 429 TLINTP 434
                P
Sbjct: 494 PFWQIP 499



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 91/199 (45%), Gaps = 35/199 (17%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +A   S +GK   + +Q      ++ +  +    +R+T+         +SPD S++ + +
Sbjct: 52  MAVSVSPDGKWLAVDLQGS----LWIIPAKGGKAKRITDYFNDARQPVWSPDGSRLAYFA 107

Query: 321 DREGKEQLYVMQSNGSDQKRISQ----DKEASYFDPVWSPQGDLIAFTKFSGEKFAI--- 373
            R+G   L+ ++ +GSD ++++Q    D+E     P WSP G  IAF+      + I   
Sbjct: 108 YRDGGYDLWTIKPDGSDMRKLTQGAWDDRE-----PAWSPDGRTIAFSSDRSGNYDIWTL 162

Query: 374 ----GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
               G +K+  S  R   ED   + P+WSP G S+ ++    G T   LY+  +    E+
Sbjct: 163 DVASGAVKQVSSNPR---ED---RMPSWSPDGASIAYAGIDGGKT--ALYATTVADGKES 214

Query: 430 L-------INTPAYASDPQ 441
           L       ++ P+Y    Q
Sbjct: 215 LLKQVAGRVDAPSYGPTGQ 233



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 14/115 (12%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD----PVWSPQGD 359
           +++ S SPD   +    D +G   L+++ + G   KRI+      YF+    PVWSP G 
Sbjct: 51  SMAVSVSPDGKWLAV--DLQG--SLWIIPAKGGKAKRITD-----YFNDARQPVWSPDGS 101

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGD 413
            +A+  +    + +  +K DGS  R L + + + + P WSP GR++ FS  + G+
Sbjct: 102 RLAYFAYRDGGYDLWTIKPDGSDMRKLTQGAWDDREPAWSPDGRTIAFSSDRSGN 156



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 27/205 (13%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFSPNQQKVAYATYD 232
            SRI FV+           L +M   G     LT  RD  L  +P +SP+ Q +AY +  
Sbjct: 330 GSRIAFVA--------LGDLYLMSSKGGAPENLT--RDAALDADPAWSPDGQSIAYTSDK 379

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR-ALISVQKDEAM-DIYSVDLQ 290
              + ++++ D +  +  +++ +  +  L   +S +G R A + V     +  +  VD+ 
Sbjct: 380 GGGLPQLWMRDLKTGKD-RKLTSIDTQPLGAAWSPDGSRIAFLDVDGRWGVAGVCVVDVA 438

Query: 291 SNATERLTNTLFINISASYSPDSSQIVF-------ESDREGKEQLYVMQSNGSDQK--RI 341
           +    RL  +L    S ++SPD   +          S REG  Q+YV+ ++G  +   +I
Sbjct: 439 TGKITRLQASLGQPGSPTWSPDGKYVAIALSYKYSNSFREGTNQIYVIPADGKGEPFWQI 498

Query: 342 SQDKEAS----YFDPVWSPQGDLIA 362
            Q    +       P WSP G  +A
Sbjct: 499 PQANAGTDTRGGGGPAWSPDGTKMA 523


>gi|126178726|ref|YP_001046691.1| peptidase S9B dipeptidylpeptidase IV subunit [Methanoculleus
           marisnigri JR1]
 gi|125861520|gb|ABN56709.1| peptidase S9B, dipeptidylpeptidase IV domain protein
           [Methanoculleus marisnigri JR1]
          Length = 395

 Score = 62.8 bits (151), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 129/297 (43%), Gaps = 50/297 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF---EPRFSPNQQKVAYAT 230
            +RI FVS   V   I+    V++RDG N   +T  R   LF   +P +SP+ +K+ + +
Sbjct: 57  GARIAFVSSDGVHAGIR----VIERDGQNPVPVTDDRSWNLFTEFDP-WSPDGKKLLFLS 111

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFS-------SNGKRAL----- 273
            D    L ++ M+      P   G  R      ++  P  S       ++GKR +     
Sbjct: 112 -DGGRGLDLWTMN------PDGTGRVRLTEGGRIVPIPGLSGYGADWNTDGKRIVYTSCL 164

Query: 274 ----------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
                     +S  + EA DI+ +D      ++LT      +   + P   +I + +DR 
Sbjct: 165 FDDAAIQEVNLSAIRTEA-DIWIMDADGGNKKQLTTDGDARLPL-WQPQGDRIAYLADRS 222

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG----EKFAIGVMKKD 379
           G  +++ MQS+G+ + +++   E S  +  WSP G  IA+   S      +F++ ++  D
Sbjct: 223 GNREIWTMQSDGTGKTQVTF-SEGSVSEYSWSPDGTRIAYVVASPPGTLPEFSLRIINSD 281

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           GS    L   +   +P WSP G  + F R +  D    +   D +G      + PAY
Sbjct: 282 GSGSEQLTTGNRDTSPVWSPDGTRIAF-RSESRDRALWVMKSDGSGLAPLGPDNPAY 337



 Score = 43.1 bits (100), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 26/218 (11%)

Query: 165 SITGEKGDFNS---RILFVS---------ESVVSGI-IKNSLCVMDRDGANIRYLTPSRD 211
            ++G   D+N+   RI++ S         E  +S I  +  + +MD DG N + LT   D
Sbjct: 143 GLSGYGADWNTDGKRIVYTSCLFDDAAIQEVNLSAIRTEADIWIMDADGGNKKQLTTDGD 202

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGK 270
             L  P + P   ++AY   D      ++ M +  D   K    F    ++   +S +G 
Sbjct: 203 ARL--PLWQPQGDRIAYLA-DRSGNREIWTMQS--DGTGKTQVTFSEGSVSEYSWSPDGT 257

Query: 271 R-ALISVQKDEAMDIYS---VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           R A +       +  +S   ++   + +E+LT T   + S  +SPD ++I F S+   + 
Sbjct: 258 RIAYVVASPPGTLPEFSLRIINSDGSGSEQLT-TGNRDTSPVWSPDGTRIAFRSESRDR- 315

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            L+VM+S+GS    +  D  A Y    WSP G  I  +
Sbjct: 316 ALWVMKSDGSGLAPLGPDNPA-YMMQQWSPDGRTIVVS 352



 Score = 43.1 bits (100), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 8/84 (9%)

Query: 348 SYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPSG 401
           S FD  P WSP G  IAF    G    I V+++DG     + +D +    T    WSP G
Sbjct: 45  SAFDSYPFWSPDGARIAFVSSDGVHAGIRVIERDGQNPVPVTDDRSWNLFTEFDPWSPDG 104

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNG 425
           + L+F    DG  G  L++++ +G
Sbjct: 105 KKLLF--LSDGGRGLDLWTMNPDG 126



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 24/170 (14%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY---FDP 352
           +LTN    +    +SPD ++I F S       + V++ +G +   ++ D+  +    FDP
Sbjct: 40  QLTNDSAFDSYPFWSPDGARIAFVSSDGVHAGIRVIERDGQNPVPVTDDRSWNLFTEFDP 99

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--------QAPTWSPSGRSL 404
            WSP G  + F    G    +  M  DG+    L E   +            W+  G+ +
Sbjct: 100 -WSPDGKKLLFLSDGGRGLDLWTMNPDGTGRVRLTEGGRIVPIPGLSGYGADWNTDGKRI 158

Query: 405 IFSRKKDGD------------TGSKLYSIDLNGRNETLINTPAYASDPQW 442
           +++     D            T + ++ +D +G N+  + T   A  P W
Sbjct: 159 VYTSCLFDDAAIQEVNLSAIRTEADIWIMDADGGNKKQLTTDGDARLPLW 208


>gi|298675402|ref|YP_003727152.1| WD40 domain-containing protein beta Propeller [Methanohalobium
           evestigatum Z-7303]
 gi|298288390|gb|ADI74356.1| WD40 domain protein beta Propeller [Methanohalobium evestigatum
           Z-7303]
          Length = 628

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 117/260 (45%), Gaps = 25/260 (9%)

Query: 192 SLCVMDRDGANIRYL-----TP-----SRDQILFEPRFSPNQQKVAYATYD---DEDILR 238
           +L +M+ DG +I+ +     TP       D+++  P +SP+     Y + +   + +IL 
Sbjct: 101 ALYLMEADGFDIKRIAWGECTPYTRKVGNDKLIGLPSWSPDGDVFTYTSEELAKNGNILG 160

Query: 239 VYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATE 295
            +L+    +      G+F S  +    ++S +G   L    +K E    Y +DL  N T 
Sbjct: 161 EFLIVDADNLNTIEKGSFISNKIDFIKKWSPDGSYLLYRGYKKGEGPKCYLLDLTRNITR 220

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           R   T +     ++SP  ++I F  + +G E  +V   +  + + I   K +S  +P+WS
Sbjct: 221 RFPITQYNPEDITWSPKGNKIAFLGEDKGNESAFVYNLDNGNLRNIFSTKNSSIHNPLWS 280

Query: 356 PQGDLIAFTKFSGEK----FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           P G  +AF+K         + I +   +G   +L      +    W  S + L+++    
Sbjct: 281 PDGRKLAFSKIEDNNVKDVYVIDINVVNGRPYKLTTLHGGILVE-WLDSEK-LLYTEYSP 338

Query: 412 GDTGSKLYSIDLNGRNETLI 431
            D    LYSI +N RN+TL+
Sbjct: 339 EDN---LYSISVNSRNKTLL 355



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 103/232 (44%), Gaps = 23/232 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAP 250
           S  V + D  N+R +  +++  +  P +SP+ +K+A++  +D ++  VY++D  + +  P
Sbjct: 252 SAFVYNLDNGNLRNIFSTKNSSIHNPLWSPDGRKLAFSKIEDNNVKDVYVIDINVVNGRP 311

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASY 309
            ++      IL     S     L+  +     ++YS+ + S N T    +T    I  SY
Sbjct: 312 YKLTTLHGGILVEWLDS---EKLLYTEYSPEDNLYSISVNSRNKTLLYNSTNESGIDYSY 368

Query: 310 SPDS-----SQIVFESDREG---KEQLYV-----MQSNGSDQKRISQDKEASYFDPVWSP 356
           S  S      + VF  ++ G   K   Y+     M ++GS++K    + +   F+  W  
Sbjct: 369 SDHSFVDPTGEFVFVEEQTGLNYKTNGYINKFTLMDTDGSNKKDWKINPQG--FE--WCG 424

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
              L+     +     + V     S+    V  S+++   W+P+GR L F+R
Sbjct: 425 DDLLLEVVTENDTNKLVMVNASTKSESNTSVNGSHIEKINWNPTGRYL-FTR 475


>gi|297156269|gb|ADI05981.1| amidohydrolase [Streptomyces bingchenggensis BCW-1]
          Length = 1088

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 75/151 (49%), Gaps = 6/151 (3%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +++V        RLT          +SPD   +V++S  +G   L++ +++G+  +R++ 
Sbjct: 94  LWTVPAAGGEATRLTGIDQEATEPDFSPDGRHLVYQSYTDGNFHLWLARADGTGARRLTS 153

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQ--APTWSP 399
              A + +P +SP G  IA+   +  ++AI V+  D    ++     D+ +Q   P W P
Sbjct: 154 GG-ADHREPRFSPDGKRIAYAGEADGRYAIHVLDLDSGATKVWAPSTDATVQQAQPFWRP 212

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            G+++ F+  K GD    +  +D +G+  TL
Sbjct: 213 DGKAIAFTSGK-GDAPQSVVQVDADGKRTTL 242



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 10/180 (5%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNG 269
           DQ   EP FSP+ + + Y +Y D +    +L   R D    +R+ +  +    PRFS +G
Sbjct: 111 DQEATEPDFSPDGRHLVYQSYTDGNF---HLWLARADGTGARRLTSGGADHREPRFSPDG 167

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKE 326
           KR   + + D    I+ +DL S AT+    +    +  +   + PD   I F S +    
Sbjct: 168 KRIAYAGEADGRYAIHVLDLDSGATKVWAPSTDATVQQAQPFWRPDGKAIAFTSGKGDAP 227

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI---GVMKKDGSQE 383
           Q  V       +  ++   E     P +SP G   A+   +    A+   GV   D  ++
Sbjct: 228 QSVVQVDADGKRTTLATVTEGRVAGPSFSPDGARFAYVHLASAATALVVDGVTVSDAEED 287



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 4/148 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS +G+  +     D    ++          RLT+    +    +SPD  +I +  + 
Sbjct: 117 PDFSPDGRHLVYQSYTDGNFHLWLARADGTGARRLTSGGADHREPRFSPDGKRIAYAGEA 176

Query: 323 EGKEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKD 379
           +G+  ++V+  +    K    S D       P W P G  IAFT   G+   ++  +  D
Sbjct: 177 DGRYAIHVLDLDSGATKVWAPSTDATVQQAQPFWRPDGKAIAFTSGKGDAPQSVVQVDAD 236

Query: 380 GSQERL-LVEDSNLQAPTWSPSGRSLIF 406
           G +  L  V +  +  P++SP G    +
Sbjct: 237 GKRTTLATVTEGRVAGPSFSPDGARFAY 264



 Score = 43.1 bits (100), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 4/149 (2%)

Query: 260 ILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           I++P  S +G+R   +   D  +  +     + +A + + +   +N   ++SPD S +V+
Sbjct: 363 IVSPSLSPDGERIAFAALGDIWLAPVNPPRGKGSAPKAVVSDGHLNTDPAWSPDGSALVY 422

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SDR G   L+         +R++  ++A+   P +SP G  +AF   +G    + V   
Sbjct: 423 VSDRGGAADLWTYDIADGTTRRLTDLQDAAS-GPAFSPDGASVAFGLGAGTLHTVDVAT- 480

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            G+  ++    +    PT+S  GR L  +
Sbjct: 481 -GAVRKVAGPLNAPGRPTFSADGRKLSLA 508



 Score = 40.0 bits (92), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 9/109 (8%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR----APKRIGNFRSMILAPRFSSNG 269
           +  P  SP+ +++A+A   D     ++L      R    APK + +   +   P +S +G
Sbjct: 363 IVSPSLSPDGERIAFAALGD-----IWLAPVNPPRGKGSAPKAVVSDGHLNTDPAWSPDG 417

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
              +    +  A D+++ D+    T RLT+        ++SPD + + F
Sbjct: 418 SALVYVSDRGGAADLWTYDIADGTTRRLTDLQDAASGPAFSPDGASVAF 466



 Score = 36.6 bits (83), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 5/92 (5%)

Query: 352 PVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRK 409
           P  SP G+ IAF        A +   +  GS  + +V D +L   P WSP G +L++   
Sbjct: 366 PSLSPDGERIAFAALGDIWLAPVNPPRGKGSAPKAVVSDGHLNTDPAWSPDGSALVYVSD 425

Query: 410 KDGDTGSKLYSIDL-NGRNETLINTPAYASDP 440
           + G   + L++ D+ +G    L +    AS P
Sbjct: 426 RGG--AADLWTYDIADGTTRRLTDLQDAASGP 455


>gi|284035677|ref|YP_003385607.1| amidohydrolase [Spirosoma linguale DSM 74]
 gi|283814970|gb|ADB36808.1| amidohydrolase [Spirosoma linguale DSM 74]
          Length = 1005

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 3/154 (1%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +S +G+R       D    I++V       ++LTN ++ +    +SPD  Q+VF SDR
Sbjct: 86  PSWSPDGQRIAFHSFWDGRYHIWTVSATGGKPQQLTNGIYDDREPHWSPDGKQLVFASDR 145

Query: 323 EGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            G   ++  Q N +D K     +   + F+P +SP G  IA+     +   + ++   G+
Sbjct: 146 SGNYDIW--QLNLADGKLTQLTNGSGNEFNPAYSPNGKQIAYISDRTDAPGVYILPLGGT 203

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           ++ +    S L   +W P G  L ++   +  +G
Sbjct: 204 EKLVAPTMSKLAGVSWHPDGSQLFYNLLNNTQSG 237



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 15/159 (9%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           R+T T   N++A  SPD  QIV   D +G   ++++ + G   K ++ D       P WS
Sbjct: 35  RVTVTEGTNMAADLSPDKRQIVI--DLQGT--IWLLPATGGVAKPLT-DPLGDCRQPSWS 89

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDT 414
           P G  IAF  F   ++ I  +   G + + L     + + P WSP G+ L+F+  + G+ 
Sbjct: 90  PDGQRIAFHSFWDGRYHIWTVSATGGKPQQLTNGIYDDREPHWSPDGKQLVFASDRSGN- 148

Query: 415 GSKLYSIDL-NGRNETLIN------TPAYASDPQWVGFM 446
              ++ ++L +G+   L N       PAY+ + + + ++
Sbjct: 149 -YDIWQLNLADGKLTQLTNGSGNEFNPAYSPNGKQIAYI 186



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/174 (20%), Positives = 78/174 (44%), Gaps = 6/174 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALI 274
           +P +SP+ Q++A+ ++ D    R ++         P+++ N       P +S +GK+ + 
Sbjct: 85  QPSWSPDGQRIAFHSFWDG---RYHIWTVSATGGKPQQLTNGIYDDREPHWSPDGKQLVF 141

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +  +    DI+ ++L      +LTN      + +YSP+  QI + SDR     +Y++   
Sbjct: 142 ASDRSGNYDIWQLNLADGKLTQLTNGSGNEFNPAYSPNGKQIAYISDRTDAPGVYILPLG 201

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           G++  ++     +      W P G  + +   +  +  +  +     + R+L E
Sbjct: 202 GTE--KLVAPTMSKLAGVSWHPDGSQLFYNLLNNTQSGLTSVSVSDGKARMLTE 253



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 96/218 (44%), Gaps = 34/218 (15%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           EP +SP+  K+ Y + D    + V++ D +  +  + + +    +  P +S +G + +  
Sbjct: 365 EPGWSPDGSKLTYVS-DRNGNMDVWIRDLKTGQD-RLLADMSDDLHYPTWSPDGSK-IAF 421

Query: 276 VQKDE-----------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---- 320
            Q D            A   Y+ D+ +  T +L  +LF+   AS+SPD   +   +    
Sbjct: 422 YQSDPRNAWGRSTLYVADVTYTADVTAPKTRKLHESLFVPSQASWSPDGKTLAVSALHPY 481

Query: 321 ---DREGKEQLYVMQSNGSDQKRISQDKEASYF-----DPVWSPQGDLIAFTKFSGEKFA 372
               REG  ++ ++  +G + + +S     S        PVWSP G  +A+    G  + 
Sbjct: 482 SSRYREGVSEVLLLSFDGKNDRYVSPAPNHSLATRGQNGPVWSPDGTKMAYV-LDGLLWI 540

Query: 373 IGVMKKDGSQ----ERLLVEDSNLQAPTWSPSGRSLIF 406
             V K DG+      +L  E +  + PTW+   +SL+F
Sbjct: 541 TDV-KPDGTPIGTPRQLTTEQA--ETPTWTSDSKSLLF 575



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 96/212 (45%), Gaps = 31/212 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+ +++A+A   D     ++L+ T+ ++ P+R+   ++M + P +S +G +      +
Sbjct: 328 ISPDGKQIAFAALGD-----LWLL-TKGNKVPQRLTQGKAMEVEPGWSPDGSKLTYVSDR 381

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVF-ESDRE---GKEQLYVMQS 333
           +  MD++  DL++   +RL   +  ++   ++SPD S+I F +SD     G+  LYV   
Sbjct: 382 NGNMDVWIRDLKT-GQDRLLADMSDDLHYPTWSPDGSKIAFYQSDPRNAWGRSTLYVADV 440

Query: 334 NGSDQKRISQDK--EASYFDP---VWSPQGDLIAFTKFS--GEKFAIGV-----MKKDGS 381
             +      + +    S F P    WSP G  +A +       ++  GV     +  DG 
Sbjct: 441 TYTADVTAPKTRKLHESLFVPSQASWSPDGKTLAVSALHPYSSRYREGVSEVLLLSFDGK 500

Query: 382 QERLLVEDSNL-------QAPTWSPSGRSLIF 406
            +R +    N          P WSP G  + +
Sbjct: 501 NDRYVSPAPNHSLATRGQNGPVWSPDGTKMAY 532



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 78/179 (43%), Gaps = 38/179 (21%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D++ +   +   +RLT    + +   +SPD S++ + SDR G   +++     + Q R+ 
Sbjct: 342 DLWLLTKGNKVPQRLTQGKAMEVEPGWSPDGSKLTYVSDRNGNMDVWIRDLK-TGQDRLL 400

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAP--- 395
            D       P WSP G  IAF + S  + A G       +  L V D    +++ AP   
Sbjct: 401 ADMSDDLHYPTWSPDGSKIAFYQ-SDPRNAWG-------RSTLYVADVTYTADVTAPKTR 452

Query: 396 ------------TWSPSGRSLIF-------SRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                       +WSP G++L         SR ++G +   L S D  G+N+  + +PA
Sbjct: 453 KLHESLFVPSQASWSPDGKTLAVSALHPYSSRYREGVSEVLLLSFD--GKNDRYV-SPA 508


>gi|162448922|ref|YP_001611289.1| tolB protein [Sorangium cellulosum 'So ce 56']
 gi|161159504|emb|CAN90809.1| tolB protein [Sorangium cellulosum 'So ce 56']
          Length = 444

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 84/378 (22%), Positives = 156/378 (41%), Gaps = 59/378 (15%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  VV +DL+    F ++   +    +   DS    + W++ G + +V+    K   D++
Sbjct: 72  IHSVVRRDLELCGEFEVLPDSAAPDGLYLSDSPVDVKAWSAKGVEAVVSVSGKKVAADKV 131

Query: 125 RVEFRLWDV-KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            +  + + V + +  +  KKF       R  +H ++D +  ++TG+ G F S + F S  
Sbjct: 132 ELVGQAFLVNRGQAPVFDKKFIVPLRDVRFESHRVADQLIGALTGQNGGFASHMTFASG- 190

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             SG ++    + D DG + R ++P  DQ    P F  N+Q + YA     D  +V+   
Sbjct: 191 --SGSLRRVFTI-DADGHDARAVSPP-DQTAIAPAFGKNEQ-LHYAASVKGDEYKVFTPA 245

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS-VDLQS----------- 291
                 P      +  +    FS +  +  +S+     + ++S  DLQS           
Sbjct: 246 GGPLPLP-----VKGSVYGIAFSKDRAQVALSIGVGSTIKLFSGPDLQSIKPASEVGMAL 300

Query: 292 ------------NATERLTNTLFINISASYSPD---SSQIVFESDREGKEQLYVM----- 331
                       +   R    +++   A  SPD   +S   F +  +G + +Y +     
Sbjct: 301 HPVFTPTGKLAFSGEGRYGQRIYVGDKA-ISPDGLFASAPTFCNHPDGVKAVYAVGVGKN 359

Query: 332 ------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQE 383
                    G    R++Q++  + + P  SP G L+AF  T+ SGE   + VM+ DG + 
Sbjct: 360 TDLVASGETGGGLVRLTQNQGRNGY-PACSPDGRLVAFFSTRTSGEGPGLYVMRVDGQRP 418

Query: 384 RLLVEDSNLQAPT--WSP 399
           + +   SNL   +  W P
Sbjct: 419 KRI---SNLLGDSLRWDP 433


>gi|332304917|ref|YP_004432768.1| amidohydrolase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172246|gb|AEE21500.1| amidohydrolase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 1114

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 12/138 (8%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY   +     + LT     NI  ++SPD S+I F SDR+G   ++VM S+GS+  +++
Sbjct: 85  DIYVSPIAGGEAKSLTQDFAWNIQPTFSPDGSKIAFISDRDGLSNVWVMNSDGSNLVQVT 144

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVEDS---- 390
            +K      P WSP G  I   K         +GE +       DG   +  V  +    
Sbjct: 145 DEKNNLIHSPKWSPDGQYIVANKGIMSSRSIPAGEIWLYHHSGGDGMVIKKRVHGNPDQK 204

Query: 391 NLQAPTWSPSGRSLIFSR 408
           N+  P +SP G+ L +++
Sbjct: 205 NIADPAFSPDGKYLYYTQ 222



 Score = 36.6 bits (83), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 6/118 (5%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  SPD   I+F++      +LYV        KR+++  +   + P +S  G  I FT +
Sbjct: 384 AQKSPDGKSILFQA----LGKLYVKDIKSGKAKRLTRQNDHDEYYPRYSHDGKKIVFTTW 439

Query: 367 SGEKF-AIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           S E   ++  +   G  E+++  E  +   P++S   + + +++K  G   +  YS++
Sbjct: 440 SDETLGSVRTVSASGRSEKVITTEPGHYIEPSFSTDDKLITYNKKTGGYLLAPEYSVE 497


>gi|300789887|ref|YP_003770178.1| hypothetical protein AMED_8073 [Amycolatopsis mediterranei U32]
 gi|299799401|gb|ADJ49776.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
          Length = 922

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 69/141 (48%), Gaps = 9/141 (6%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N+SA+ SPD   I  +        ++V+ + G   +R++ D + +   P WSP G  + F
Sbjct: 40  NLSAALSPDGRWIAVDL----VTGIWVLPAGGGRARRLTDDLQDATL-PTWSPDGRRLVF 94

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +    F + V+   G   R L E   + + P +SP G  L FS  +DG  G  L  +D
Sbjct: 95  QSYRDGNFHLYVIDAAGGTPRKLTEGRFDHREPVFSPDGTKLAFSSDRDGSYGIHL--LD 152

Query: 423 L-NGRNETLINTPAYASDPQW 442
           L +G   T+++TP   + P+W
Sbjct: 153 LASGAISTVVSTPDEEASPRW 173



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 11/145 (7%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +S +G+R +    +D    +Y +D       +LT   F +    +SPD +++ F SDR
Sbjct: 83  PTWSPDGRRLVFQSYRDGNFHLYVIDAAGGTPRKLTEGRFDHREPVFSPDGTKLAFSSDR 142

Query: 323 EGKEQLYVMQ-SNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KD 379
           +G   ++++  ++G+    +S  D+EAS   P WS  G  I FT       AI V+    
Sbjct: 143 DGSYGIHLLDLASGAISTVVSTPDEEAS---PRWSADGTKIVFTV---NDTAIDVVTLAT 196

Query: 380 GSQERLLVEDS--NLQAPTWSPSGR 402
           G++ RL+       L  P + P G+
Sbjct: 197 GARTRLVTATGADKLYGPAFGPGGQ 221



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 2/133 (1%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +  D    I+ +        RLT+ L      ++SPD  ++VF+S R+G   LYV+ + G
Sbjct: 52  IAVDLVTGIWVLPAGGGRARRLTDDLQDATLPTWSPDGRRLVFQSYRDGNFHLYVIDAAG 111

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA- 394
              +++++ +   + +PV+SP G  +AF+      + I ++         +V   + +A 
Sbjct: 112 GTPRKLTEGR-FDHREPVFSPDGTKLAFSSDRDGSYGIHLLDLASGAISTVVSTPDEEAS 170

Query: 395 PTWSPSGRSLIFS 407
           P WS  G  ++F+
Sbjct: 171 PRWSADGTKIVFT 183



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 20/173 (11%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           I +P  S +GKR  I+ +   A  IY V       +RL    + N    + PD +++++ 
Sbjct: 310 IASPVVSRDGKR--IAFRALNA--IYVVAAGGGRPQRLIGDGYFNSDPDFHPDGTKLLYT 365

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SDR G   L+ +   G+    +      +   P WSP G  +A+    G  +   V    
Sbjct: 366 SDRLGTADLW-LHDLGTGTDTVLTQLAGAQVAPRWSPDGGRVAYADQDGATWIHDVASNS 424

Query: 380 GSQ--ERLLVEDSNLQAPTWSPSGRSLIFS-------RKKDGDTGSKLYSIDL 423
             Q    L +       PTWSP G  L  +       R ++G   S++ ++DL
Sbjct: 425 AQQVTPPLFMPGR----PTWSPDGSVLALAAVKPYSKRYREGT--SQILTVDL 471



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 12/181 (6%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPS-RDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +++  +V+GI      V+   G   R LT   +D  L  P +SP+ +++ + +Y D +  
Sbjct: 51  WIAVDLVTGI-----WVLPAGGGRARRLTDDLQDATL--PTWSPDGRRLVFQSYRDGN-F 102

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +Y++D      P+++   R     P FS +G +   S  +D +  I+ +DL S A   +
Sbjct: 103 HLYVIDA-AGGTPRKLTEGRFDHREPVFSPDGTKLAFSSDRDGSYGIHLLDLASGAISTV 161

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            +T     S  +S D ++IVF  +    +   V  + G+  + ++       + P + P 
Sbjct: 162 VSTPDEEASPRWSADGTKIVFTVNDTAID--VVTLATGARTRLVTATGADKLYGPAFGPG 219

Query: 358 G 358
           G
Sbjct: 220 G 220



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 23/164 (14%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMD--TRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +P F P+  K+ Y T D      ++L D  T  D    ++   +   +APR+S +G R  
Sbjct: 352 DPDFHPDGTKLLY-TSDRLGTADLWLHDLGTGTDTVLTQLAGAQ---VAPRWSPDGGRVA 407

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-------DREGKE 326
            + Q D A  I+  D+ SN+ +++T  LF+    ++SPD S +   +        REG  
Sbjct: 408 YADQ-DGATWIH--DVASNSAQQVTPPLFMPGRPTWSPDGSVLALAAVKPYSKRYREGTS 464

Query: 327 QLYVMQSNGSDQKRISQDKEASYF------DPVWSPQGDLIAFT 364
           Q+  +    + + R ++      F       P+WSP G  +AFT
Sbjct: 465 QILTVDLK-THELRYAEPMPFRSFATRGDDGPLWSPDGRYLAFT 507



 Score = 43.9 bits (102), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 7/82 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRS 403
           +E +      SP G  IA    +G    I V+   G + R L +D  +   PTWSP GR 
Sbjct: 36  REGTNLSAALSPDGRWIAVDLVTG----IWVLPAGGGRARRLTDDLQDATLPTWSPDGRR 91

Query: 404 LIFSRKKDGDTGSKLYSIDLNG 425
           L+F   +DG+    LY ID  G
Sbjct: 92  LVFQSYRDGNF--HLYVIDAAG 111



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 35/165 (21%), Positives = 67/165 (40%), Gaps = 30/165 (18%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P F  +G + L +  +    D++  DL +     LT      ++  +SPD  ++ + +D+
Sbjct: 353 PDFHPDGTKLLYTSDRLGTADLWLHDLGTGTDTVLTQLAGAQVAPRWSPDGGRVAY-ADQ 411

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDG 380
           +G   ++ + SN + Q             P WSP G ++A    K   +++      ++G
Sbjct: 412 DGATWIHDVASNSAQQVTPPLFMPGR---PTWSPDGSVLALAAVKPYSKRY------REG 462

Query: 381 SQERLLVEDSNLQ------------------APTWSPSGRSLIFS 407
           + + L V+    +                   P WSP GR L F+
Sbjct: 463 TSQILTVDLKTHELRYAEPMPFRSFATRGDDGPLWSPDGRYLAFT 507


>gi|110637833|ref|YP_678040.1| tol biopolymer transport system, periplasmic protein [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110280514|gb|ABG58700.1| tol biopolymer transport system, periplasmic protein [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 313

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 13/158 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G       +++   DIY++       +RLT+   ++    Y+ D + I F S R G
Sbjct: 154 WSPDGNTLAYCAERNGEFDIYTIPANGGTEQRLTDAAGLDDGPDYTADGTYIYFNSVRTG 213

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------KFAIGVM 376
           K +++ M+ +GS+Q++++ D    +F    SP G  I F  +  E           + +M
Sbjct: 214 KMKIWRMKPDGSEQEQVTFDDYNDWFAHP-SPDGKYIVFVSYEPEVEGHPANKNVTLRLM 272

Query: 377 KKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKK 410
              G + R++ +       +  P+WSP  +   F   K
Sbjct: 273 PMQGGEPRVIAKLFGGQGTINVPSWSPDSKRFAFVSYK 310


>gi|307295800|ref|ZP_07575633.1| amidohydrolase [Sphingobium chlorophenolicum L-1]
 gi|306878456|gb|EFN09677.1| amidohydrolase [Sphingobium chlorophenolicum L-1]
          Length = 992

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 4/154 (2%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +RI ++ +    P +S +G R      +D   D++++    +   +LT   + +   ++S
Sbjct: 82  RRITDYFNDARQPVWSPDGSRLAYFAYRDGGYDLWTIRPDGSDMRKLTGGAWDDREPTWS 141

Query: 311 PDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           PD   I F SDR G   ++ +  ++G+ ++R S  +E     P WSP G  IA+    G 
Sbjct: 142 PDGRTIAFSSDRSGNYDIWTLDVASGAVKQRSSNPREDRM--PSWSPDGASIAYAGIDGG 199

Query: 370 KFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGR 402
           K A+        +E LL + +  + AP++ P+G+
Sbjct: 200 KTALYATSLADGKESLLKQVAGRIDAPSYGPAGQ 233



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 18/186 (9%)

Query: 260 ILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           I+ P  S +G R A +++      D+Y +  +    E LT    ++   ++SPD   I +
Sbjct: 321 IVHPTISPDGSRIAFVALG-----DLYLMSSKGGTPENLTKDAALDADPAWSPDGQSIAY 375

Query: 319 ESDREGK-EQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            SD+ G   QL++    +G D+K  S D +       WSP G  IAF    G     GV 
Sbjct: 376 TSDKGGGLPQLWIRDLKSGKDRKLTSIDTQP--LGAAWSPDGRRIAFLDVDGRWGVAGVC 433

Query: 377 KKD---GSQERLLVEDSNLQAPTWSPSGR--SLIFSRKKDG---DTGSKLYSIDLNGRNE 428
             D   G   RL        +PTWSP G+  ++  S K      +  +++Y I  +G+ E
Sbjct: 434 VVDVATGKITRLQSSLGQPGSPTWSPDGKYVAIALSYKYSNSFREGTNQVYVIPADGKGE 493

Query: 429 TLINTP 434
                P
Sbjct: 494 PFWQIP 499



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 89/199 (44%), Gaps = 35/199 (17%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +A   S +GK   + +Q      ++ +  +     R+T+         +SPD S++ + +
Sbjct: 52  MAVSVSPDGKWLAVDLQGS----LWIIPAKGGKARRITDYFNDARQPVWSPDGSRLAYFA 107

Query: 321 DREGKEQLYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAI--- 373
            R+G   L+ ++ +GSD ++++     D+E     P WSP G  IAF+      + I   
Sbjct: 108 YRDGGYDLWTIRPDGSDMRKLTGGAWDDRE-----PTWSPDGRTIAFSSDRSGNYDIWTL 162

Query: 374 ----GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
               G +K+  S  R   ED   + P+WSP G S+ ++    G T   LY+  L    E+
Sbjct: 163 DVASGAVKQRSSNPR---ED---RMPSWSPDGASIAYAGIDGGKT--ALYATSLADGKES 214

Query: 430 L-------INTPAYASDPQ 441
           L       I+ P+Y    Q
Sbjct: 215 LLKQVAGRIDAPSYGPAGQ 233



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 60/115 (52%), Gaps = 14/115 (12%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD----PVWSPQGD 359
           +++ S SPD   +    D +G   L+++ + G   +RI+      YF+    PVWSP G 
Sbjct: 51  SMAVSVSPDGKWLAV--DLQG--SLWIIPAKGGKARRITD-----YFNDARQPVWSPDGS 101

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGD 413
            +A+  +    + +  ++ DGS  R L   + + + PTWSP GR++ FS  + G+
Sbjct: 102 RLAYFAYRDGGYDLWTIRPDGSDMRKLTGGAWDDREPTWSPDGRTIAFSSDRSGN 156



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 89/201 (44%), Gaps = 27/201 (13%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFSPNQQKVAYATYD 232
            SRI FV+           L +M   G     LT  +D  L  +P +SP+ Q +AY +  
Sbjct: 330 GSRIAFVA--------LGDLYLMSSKGGTPENLT--KDAALDADPAWSPDGQSIAYTSDK 379

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR-ALISVQKDEAM-DIYSVDLQ 290
              + ++++ D +  +  +++ +  +  L   +S +G+R A + V     +  +  VD+ 
Sbjct: 380 GGGLPQLWIRDLKSGKD-RKLTSIDTQPLGAAWSPDGRRIAFLDVDGRWGVAGVCVVDVA 438

Query: 291 SNATERLTNTLFINISASYSPDSSQIVF-------ESDREGKEQLYVMQSNGSDQK--RI 341
           +    RL ++L    S ++SPD   +          S REG  Q+YV+ ++G  +   +I
Sbjct: 439 TGKITRLQSSLGQPGSPTWSPDGKYVAIALSYKYSNSFREGTNQVYVIPADGKGEPFWQI 498

Query: 342 SQDKEAS----YFDPVWSPQG 358
            Q    +       P WSP G
Sbjct: 499 PQANAGTDTRGGGGPAWSPDG 519


>gi|94971260|ref|YP_593308.1| transcriptional regulatory protein-like [Candidatus Koribacter
           versatilis Ellin345]
 gi|94553310|gb|ABF43234.1| transcriptional regulatory protein-like protein [Candidatus
           Koribacter versatilis Ellin345]
          Length = 469

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 55/110 (50%), Gaps = 3/110 (2%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N    +SPD  ++ F S+R G   +++  ++GSD   ++   +A    P WSP G  IAF
Sbjct: 218 NEGPQFSPDGKRLTFMSNRNGATDVWIANASGSDPHPLTTLGDAG--TPRWSPDGQTIAF 275

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDG 412
                +  AI  +  DG   R+L+  DSN   P+WS  G  + F+  + G
Sbjct: 276 DSHIHKYSAILTIPADGGAPRVLIAGDSNNSVPSWSKDGHFIYFASDRTG 325



 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 5/150 (3%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            P+FS +GKR      ++ A D++  +   +    LT TL    +  +SPD   I F+S 
Sbjct: 220 GPQFSPDGKRLTFMSNRNGATDVWIANASGSDPHPLT-TLGDAGTPRWSPDGQTIAFDSH 278

Query: 322 REGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                 +  + ++G   +  I+ D   S   P WS  G  I F      +F +  +   G
Sbjct: 279 IHKYSAILTIPADGGAPRVLIAGDSNNSV--PSWSKDGHFIYFASDRTGRFEVWRVPTTG 336

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              + + +D    AP  S  G+ L +++ +
Sbjct: 337 GPAQQITQDGGF-APVESADGKLLFYAKNQ 365



 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 5/153 (3%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           PR+S +G+         +   I ++     A   L      N   S+S D   I F SDR
Sbjct: 264 PRWSPDGQTIAFDSHIHKYSAILTIPADGGAPRVLIAGDSNNSVPSWSKDGHFIYFASDR 323

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDG 380
            G+ +++ + + G   ++I+QD     F PV S  G L+ + K  F   +     ++  G
Sbjct: 324 TGRFEVWRVPTTGGPAQQITQD---GGFAPVESADGKLLFYAKNQFPNPEVWEVSLEGGG 380

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            +  L      +   TW+ +G S+ +  +  G+
Sbjct: 381 VEAPLRPIIRPVTWATWAVAGDSVFYVEEGPGN 413


>gi|262194812|ref|YP_003266021.1| serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
 gi|262078159|gb|ACY14128.1| serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
          Length = 969

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/248 (25%), Positives = 115/248 (46%), Gaps = 22/248 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A++R+ +  +  +  + R + N Q++A+    D D   V         AP  +      +
Sbjct: 670 AHLRFSSDGKHMVYADIRSASNLQRIAF----DPDAGAVV-------GAPTWVTGGSLDL 718

Query: 261 LAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            AP  S +G+   ++V  DEA   D+  + +  +   RLT+ ++ + +  ++PD S+I F
Sbjct: 719 NAPDVSPDGEWLAMTV-TDEANREDLLVMRVDGSERRRLTDDVYNDRTPRWAPDGSRIAF 777

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SDR GK +L+ +  +G+  ++++     S + PVWSP G  +   + S   + I   + 
Sbjct: 778 YSDRSGKYELWAVDPHGNRLEQLTFTTGDSVYYPVWSPDGSRVLVQQRSDGSYVIDAEQP 837

Query: 379 DGSQ--ERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL----I 431
             +Q  ERL  VED+     +WS  G  L  +       G   Y+    G  E L    +
Sbjct: 838 WEAQTPERLADVEDTWFTGWSWSSDGDRLAGAVHIGDRHGLGTYTFS-TGAYEILSDAEM 896

Query: 432 NTPAYASD 439
           +TP + +D
Sbjct: 897 DTPLWLAD 904



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 10/140 (7%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S  PD+  ++F     G   +Y  +  GS+   ++ D      +PV SP G  IAF + +
Sbjct: 444 SLGPDARWVIFAGRDGGDWDIYYQRIGGSNAFNLTADSAYDDTEPVLSPDGAHIAF-RST 502

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDL 423
            E   I VM+  G   R +V++     P+WSP GRSL ++ +     +  +  +L++IDL
Sbjct: 503 REGGGIYVMEVTGESVRRVVDEG--ANPSWSPDGRSLAYATRSTLLPNSRSPGELWTIDL 560

Query: 424 -NGRNETLINTPAYASDPQW 442
            +GR   + +  A A+ P W
Sbjct: 561 ASGRRRRVAD--ADATQPAW 578



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 19/173 (10%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESD 321
           P    + +  + + +     DIY   +  SNA     ++ + +     SPD + I F S 
Sbjct: 443 PSLGPDARWVIFAGRDGGDWDIYYQRIGGSNAFNLTADSAYDDTEPVLSPDGAHIAFRST 502

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---------GEKFA 372
           REG   +YVM+  G   +R+  +      +P WSP G  +A+   S         GE + 
Sbjct: 503 REGG-GIYVMEVTGESVRRVVDEGA----NPSWSPDGRSLAYATRSTLLPNSRSPGELWT 557

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           I +     S  R  V D++   P WSP G  + +    +G +   ++++   G
Sbjct: 558 IDL----ASGRRRRVADADATQPAWSPGGHRIAYWGLPEGGSQRDIWTVSAEG 606


>gi|332883941|gb|EGK04221.1| hypothetical protein HMPREF9456_01249 [Dysgonomonas mossii DSM
           22836]
          Length = 292

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 15/161 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GK       ++  MD+Y++++      RLT +  +N    Y+P    I F S R G
Sbjct: 126 WSPDGKSLTYCANREGEMDVYTININGTNETRLTFSEGLNDGPEYTPKGKYIWFNSVRTG 185

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-----------QGDLIAFTKFSGEKFAI 373
             QL+ M+++GS+Q +++ D++ + + P  SP           +GDL        +   I
Sbjct: 186 LMQLWRMKTDGSEQTQMTFDEDRNSWFPHISPDGKHVVYIAYKKGDLEPHEHLRYKNVEI 245

Query: 374 GVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKK 410
            +M   G + + L++           +WSP  +   + R K
Sbjct: 246 RIMSATGGKPQTLIKLFGGQGTFNVNSWSPDSKCFAYVRYK 286



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 55/108 (50%), Gaps = 3/108 (2%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD   + + ++REG+  +Y +  NG+++ R++   E     P ++P+G  I F    
Sbjct: 125 GWSPDGKSLTYCANREGEMDVYTININGTNETRLTFS-EGLNDGPEYTPKGKYIWFNSVR 183

Query: 368 GEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGD 413
                +  MK DGS++  +   ED N   P  SP G+ +++   K GD
Sbjct: 184 TGLMQLWRMKTDGSEQTQMTFDEDRNSWFPHISPDGKHVVYIAYKKGD 231



 Score = 37.4 bits (85), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 11/104 (10%)

Query: 351 DPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           D + SP G  +A +  S    +  + ++  +G   R +   +      WSP G+SL +  
Sbjct: 78  DHLVSPDGKRLAVSHRSLPQGRPTVFILPAEGGTPRQVTPSAPSYLHGWSPDGKSLTYCA 137

Query: 409 KKDGDTGSKLYSIDLNGRNET-------LINTPAYASDPQWVGF 445
            ++G+    +Y+I++NG NET       L + P Y    +++ F
Sbjct: 138 NREGEM--DVYTININGTNETRLTFSEGLNDGPEYTPKGKYIWF 179


>gi|332534941|ref|ZP_08410760.1| hypothetical protein PH505_bx00100 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035614|gb|EGI72105.1| hypothetical protein PH505_bx00100 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 1059

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +      +LT+ +   +   +SP+   I F SD+ G + +++M  NG +Q  ++
Sbjct: 70  DIYTMPMSGGTATKLTSDIAWQMQPRFSPNGKSIAFTSDQGGGDNIWIMDLNGENQHAVT 129

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFSGEK----FAIGVMKKDGSQERLLVEDSN----LQ 393
            +       P WSP GD L+A   F+  +      + +  K G +   L +  N    L 
Sbjct: 130 DETFRLLNSPAWSPDGDYLVARKHFTASRSLGAGEVWLYHKAGGKGVQLTKRENDQKDLG 189

Query: 394 APTWSPSGRSLIFSR 408
            P +SP GR + FS 
Sbjct: 190 EPMFSPDGRYVYFSH 204



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 22/183 (12%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIV-- 317
           + PRFS NGK    +  +    +I+ +DL       +T+  F  + S ++SPD   +V  
Sbjct: 92  MQPRFSPNGKSIAFTSDQGGGDNIWIMDLNGENQHAVTDETFRLLNSPAWSPDGDYLVAR 151

Query: 318 --FESDRE-GKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS--GEK 370
             F + R  G  ++++    G    +++  ++ +    +P++SP G  + F+  +  G+ 
Sbjct: 152 KHFTASRSLGAGEVWLYHKAGGKGVQLTKRENDQKDLGEPMFSPDGRYVYFSHDATPGKT 211

Query: 371 F------AIGVMK------KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           F        G+ K      + G  E ++        PT SP G+ L + ++ D  T   L
Sbjct: 212 FHYSKDSVAGIYKIKRYDRETGEIETIIDTMGGAIRPTPSPDGKKLAYIKRDDFQTSLYL 271

Query: 419 YSI 421
           Y +
Sbjct: 272 YDL 274



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 15/94 (15%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGD 413
           SP G  + F         I  M   G     L  D   Q  P +SP+G+S+ F+  + G 
Sbjct: 57  SPDGKTVVFDLLG----DIYTMPMSGGTATKLTSDIAWQMQPRFSPNGKSIAFTSDQGG- 111

Query: 414 TGSKLYSIDLNGRNET--------LINTPAYASD 439
            G  ++ +DLNG N+         L+N+PA++ D
Sbjct: 112 -GDNIWIMDLNGENQHAVTDETFRLLNSPAWSPD 144



 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 58/254 (22%), Positives = 98/254 (38%), Gaps = 46/254 (18%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA---PKRI 253
           D +   I+ LT   D     P++S + +K+ Y T+DD     V ++  R  R     K  
Sbjct: 387 DLESGKIKRLTKQTDHYELFPQYSRDGKKIVYTTWDDNKQGSVRVVSARSGRGDTVTKEP 446

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAM---------DIYSVDLQSNATERLTNTLFIN 304
           G +    + P FS +GK  +       ++          +YSV  +   +E ++ +    
Sbjct: 447 GKY----VEPTFSPDGKTVVYRKATGGSILNPKWSLNPGVYSVSAKGGKSELISKS---- 498

Query: 305 ISASYSP---DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               Y P   D++  VF      K  L V++      +++ + + A+ F    SP G  +
Sbjct: 499 ---GYQPQFGDANDRVFIMSPWPKPTLSVVELESKKVRKLYESEHATEFRV--SPDGQYL 553

Query: 362 AF--------TKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           AF        T F  SG+   IG        E+L V     +  +WS     L ++    
Sbjct: 554 AFAERFKVFVTPFVQSGKTINIGPKDSQFPIEQLSVRAG--ENISWSAKSNKLYWT---- 607

Query: 412 GDTGSKLYSIDLNG 425
              G +LY   L G
Sbjct: 608 --LGPELYHASLEG 619


>gi|332827955|gb|EGK00677.1| hypothetical protein HMPREF9455_02951 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 291

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 15/157 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GK       ++  MD+Y++ +      RLT +  +N    YSPD   I F S R G
Sbjct: 128 WSPDGKMLTYCANRNGEMDVYTISIDGTNETRLTTSEGLNDGPEYSPDGKYIWFNSVRTG 187

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-----------QGDLIAFTKFSGEKFAI 373
             Q++ M+++GS+Q +I+ D +++ + P  SP           +GDL        +   I
Sbjct: 188 LMQIWRMKTDGSEQTQITFDDDSNSWFPHLSPDGKNVVYIAYRKGDLEPHEHLRYKHVEI 247

Query: 374 GVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIF 406
            ++   G + + LV+           +W+P  +   F
Sbjct: 248 RMIPATGGEPQTLVKLFGGQGTFNVNSWAPDSKRFAF 284



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 6/136 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD   + + ++R G+  +Y +  +G+++ R++   E     P +SP G  I F    
Sbjct: 127 GWSPDGKMLTYCANRNGEMDVYTISIDGTNETRLTT-SEGLNDGPEYSPDGKYIWFNSVR 185

Query: 368 GEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                I  MK DGS++  +   +DSN   P  SP G+++++   + GD     +   L  
Sbjct: 186 TGLMQIWRMKTDGSEQTQITFDDDSNSWFPHLSPDGKNVVYIAYRKGDLEPHEH---LRY 242

Query: 426 RNETLINTPAYASDPQ 441
           ++  +   PA   +PQ
Sbjct: 243 KHVEIRMIPATGGEPQ 258



 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 11/100 (11%)

Query: 355 SPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP G L+A +  S    +  I V+  +G + + +          WSP G+ L +   ++G
Sbjct: 84  SPDGRLMAISHRSLPDGRPTIFVLPDEGGEPKQVTPSLPSYMHGWSPDGKMLTYCANRNG 143

Query: 413 DTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGF 445
           +    +Y+I ++G NET + T       P Y+ D +++ F
Sbjct: 144 EM--DVYTISIDGTNETRLTTSEGLNDGPEYSPDGKYIWF 181


>gi|329896695|ref|ZP_08271688.1| amidohydrolase family protein [gamma proteobacterium IMCC3088]
 gi|328921631|gb|EGG29007.1| amidohydrolase family protein [gamma proteobacterium IMCC3088]
          Length = 1092

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y V ++    +RLT TL   +   +SPD + + + SD  G   ++VM     +++ I+
Sbjct: 83  DLYLVPIEGGEAQRLTTTLAQEVQPRFSPDGTSLTYISDANGGNNIFVMDLASKEERPIT 142

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFSGEK-FAIGVM---KKDGSQERLLVEDSNLQA--- 394
            +K  S  +P W P G  ++A   F+G +    G M     DG     L    N Q    
Sbjct: 143 TEKFRSLTNPRWHPNGSGIVARKHFTGSRSLGSGEMWFYHLDGGSGVQLTTKRNEQQDEN 202

Query: 395 -PTWSPSGRSLIFSR 408
            P +SP GR L +++
Sbjct: 203 DPVYSPDGRYLFYTQ 217


>gi|212632933|ref|YP_002309458.1| amidohydrolase:amidohydrolase-like protein [Shewanella
           piezotolerans WP3]
 gi|212554417|gb|ACJ26871.1| Amidohydrolase:Amidohydrolase-like protein [Shewanella
           piezotolerans WP3]
          Length = 1064

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 13/152 (8%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NGK  +     D   DIY +       + L   +   +   YSPD   I F SD +G 
Sbjct: 58  SPNGKHIVF----DLLGDIYQISTDGGEAKPLAKGIAWQMQPVYSPDGKYIAFTSDEDGG 113

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEK----FAIGVMKKDG 380
           + +++M+++GS+ + ++ +       P WSP G  L+A   ++G +      + +    G
Sbjct: 114 DNIWIMEADGSNPRPVTTETFRLLNSPAWSPDGQYLVARKHYTGSRSLGAGEVWMYHVAG 173

Query: 381 SQERLLVEDSN----LQAPTWSPSGRSLIFSR 408
            +   L E  N    L  P +SP GR + FS+
Sbjct: 174 GEGVKLTERPNEQKDLGEPAYSPDGRYIYFSQ 205



 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 14/159 (8%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-----LTNTLFINISASYSPDSSQ 315
           L P +++      I    +E    + V+  +NA  +     +T   ++N+S S  P+   
Sbjct: 6   LTPLYAAIALSFSIPTLAEEDKKSWQVNAPANAPLQQVKIDVTEGTWMNVSVS--PNGKH 63

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           IVF  D  G   +Y + ++G + K +++   A    PV+SP G  IAFT        I +
Sbjct: 64  IVF--DLLG--DIYQISTDGGEAKPLAKGI-AWQMQPVYSPDGKYIAFTSDEDGGDNIWI 118

Query: 376 MKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDG 412
           M+ DGS  R +  ++   L +P WSP G+ L+  +   G
Sbjct: 119 MEADGSNPRPVTTETFRLLNSPAWSPDGQYLVARKHYTG 157



 Score = 43.9 bits (102), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 22/157 (14%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTK 365
           A  SPD  ++VFE+   GK  ++V         R+++ D E     P WS  G  I FT 
Sbjct: 367 AQVSPDGKKVVFEA--LGK--IWVKSLPDGKMSRLTKLDSELRELFPQWSRDGKKIVFTT 422

Query: 366 FSGEKFAIGVMK--KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG---------DT 414
           +  ++     +   ++   + L  E      PT+SP G ++++ + K G         +T
Sbjct: 423 WDDQQQGTVSLATVRNKRVKVLTKEPGKYVEPTFSPDGETIVYRKAKGGYITPRTWSQET 482

Query: 415 GSKLYSIDLNGRNETLINT----PAYASDPQWVGFMD 447
           G  LY +D++G N   I      P + +D + V FM+
Sbjct: 483 G--LYQVDIDGDNNVKITASGYQPQFGADNERVYFME 517



 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 111/282 (39%), Gaps = 59/282 (20%)

Query: 208 PSRDQILFEPRFSPNQQKVAYAT---------YDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           P+  + L EP +SP+ + + ++          Y  + +  +Y    +I R     G+   
Sbjct: 183 PNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVKGIY----KIKRYDTETGDIEV 238

Query: 259 MI------LAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTL---------- 301
           +I      + P  S +GK+ L  +++D     +Y +DL+S  TE+L   L          
Sbjct: 239 LIQGTGGAIRPTPSPDGKK-LAYIKRDGFQSSLYLLDLKSGKTEKLYGELDRDMQETWAI 297

Query: 302 -FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--------------KRISQDKE 346
             +  + S++ D+ +IVF +  +GK     ++S    Q               R  QD +
Sbjct: 298 HGVYPTMSWTADNDEIVFWA--KGKINKLNVESKSVAQIPFSVKTERAVQPAVRFQQDLD 355

Query: 347 ASYFD------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWS 398
              FD         SP G  + F      K  +  +  DG   RL   DS L+   P WS
Sbjct: 356 KDVFDVKMLRMAQVSPDGKKVVFEALG--KIWVKSLP-DGKMSRLTKLDSELRELFPQWS 412

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             G+ ++F+   D   G+   +   N R + L   P    +P
Sbjct: 413 RDGKKIVFTTWDDQQQGTVSLATVRNKRVKVLTKEPGKYVEP 454


>gi|88859959|ref|ZP_01134598.1| hypothetical protein PTD2_18145 [Pseudoalteromonas tunicata D2]
 gi|88817953|gb|EAR27769.1| hypothetical protein PTD2_18145 [Pseudoalteromonas tunicata D2]
          Length = 1061

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 9/135 (6%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++        +LT+ +   +   +SPD   I F SD +G + ++VM  +G + K ++
Sbjct: 74  DIYTMPFSGGKATQLTSDIAWQMQPRFSPDGKSIAFTSDADGGDNIWVMDVDGQNAKAVT 133

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-----VMKKDGSQERLLVEDSN----LQ 393
           ++       P WSP GD I   K      ++G     +  K G     L +  N    L 
Sbjct: 134 KETFRLLNSPAWSPDGDFIIARKHFTASRSLGAGEVWLYHKAGGNGVQLTKRENDQKDLG 193

Query: 394 APTWSPSGRSLIFSR 408
            P +SP GR + FS 
Sbjct: 194 EPAFSPDGRYVYFSH 208



 Score = 41.2 bits (95), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 85/193 (44%), Gaps = 24/193 (12%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIV-- 317
           + PRFS +GK    +   D   +I+ +D+     + +T   F  + S ++SPD   I+  
Sbjct: 96  MQPRFSPDGKSIAFTSDADGGDNIWVMDVDGQNAKAVTKETFRLLNSPAWSPDGDFIIAR 155

Query: 318 --FESDRE-GKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS--GEK 370
             F + R  G  ++++    G +  +++  ++ +    +P +SP G  + F+  +  G+ 
Sbjct: 156 KHFTASRSLGAGEVWLYHKAGGNGVQLTKRENDQKDLGEPAFSPDGRYVYFSHDATPGKT 215

Query: 371 FAI------GVMK------KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           F        G+ K      + G  E ++        PT SP G++L + ++ D    S L
Sbjct: 216 FHYSKDSVDGIYKIKRYDRQTGEIETIISGMGGAIRPTPSPDGKTLAYIKRDDFQ--SSL 273

Query: 419 YSIDLNGRNETLI 431
           Y  DL     T +
Sbjct: 274 YLYDLATGQHTKV 286



 Score = 36.6 bits (83), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 15/94 (15%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGD 413
           SP G  I F         I  M   G +   L  D   Q  P +SP G+S+ F+   D D
Sbjct: 61  SPDGKTIVFDLLG----DIYTMPFSGGKATQLTSDIAWQMQPRFSPDGKSIAFT--SDAD 114

Query: 414 TGSKLYSIDLNGRN------ET--LINTPAYASD 439
            G  ++ +D++G+N      ET  L+N+PA++ D
Sbjct: 115 GGDNIWVMDVDGQNAKAVTKETFRLLNSPAWSPD 148


>gi|156743096|ref|YP_001433225.1| peptidase S41 [Roseiflexus castenholzii DSM 13941]
 gi|156234424|gb|ABU59207.1| peptidase S41 [Roseiflexus castenholzii DSM 13941]
          Length = 1090

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 63/134 (47%), Gaps = 4/134 (2%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A DI+ VD+     ERLT     ++   +SPD S I + S R G+  +YV+  NG + +R
Sbjct: 29  AGDIWLVDVSGGQAERLTAHPANHMLPRWSPDGSAIAYTSSRTGQGDVYVLPLNGGEVRR 88

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI--GVMKKDGSQERLLVED-SNLQAPTW 397
           I+  +  S  +  WSP G  I FT     + A    +    G+  R + +    L     
Sbjct: 89  ITYHEAQSAVE-CWSPDGAAIYFTSQRERQGAAIYRIAASGGTPVRWIAQPYERLGTVAV 147

Query: 398 SPSGRSLIFSRKKD 411
           SP GR L FS  +D
Sbjct: 148 SPCGRWLAFSLMRD 161



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 111/293 (37%), Gaps = 71/293 (24%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA------T 230
           I FVS+   S     +L V  R+G     +T   D  L  P  S + + +A+       T
Sbjct: 210 IFFVSDRDGS----ENLWVAPREGGVAERITAFTDGRLLWPSISADGRMIAFERDFGIWT 265

Query: 231 YD--DEDILRVYLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----KDEA 281
            D       RV +    DT++   P R+  +         S +GK+   +V+     D A
Sbjct: 266 LDLASGATTRVPIQVRQDTKV--TPVRVQTYTRDAGELALSPDGKKVAFTVRGKIFADFA 323

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
                 D +     R+++T F +   ++SPDS ++V+ SDR G E++Y        + R+
Sbjct: 324 EKETERDQRHGPAYRISHTAFRDSDIAWSPDSRRLVYVSDRHGDEEVYCYDFLARSETRL 383

Query: 342 S---QDKEASYFDP--------------------------------------VWSPQGDL 360
           +   + K A  F P                                       WSP    
Sbjct: 384 TFGAKRKSAPCFSPDGRWIAYASGDDEIRLIEVSSGEDRPFIRAYFVFGASFAWSPDSRW 443

Query: 361 IAFT----KFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFS 407
           +AF     +F    +   + ++   Q   L   SNLQA  P WSP GR L+F+
Sbjct: 444 LAFCAQDERFFSNVYVQHIEEEQAHQISFL---SNLQAAGPLWSPDGRFLVFT 493



 Score = 44.3 bits (103), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 47/211 (22%), Positives = 82/211 (38%), Gaps = 22/211 (10%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P   P   ++A+    D     ++L+D    +A +R+    +  + PR+S +G     + 
Sbjct: 15  PSIDPAGSRIAFVYAGD-----IWLVDVSGGQA-ERLTAHPANHMLPRWSPDGSAIAYTS 68

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSN 334
            +    D+Y + L      R+T     +    +SPD + I F S RE  G     +  S 
Sbjct: 69  SRTGQGDVYVLPLNGGEVRRITYHEAQSAVECWSPDGAAIYFTSQRERQGAAIYRIAASG 128

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
           G+  + I+Q  E      V SP G  +AF+      +  G     G++  L+    +   
Sbjct: 129 GTPVRWIAQPYERLGTVAV-SPCGRWLAFSLMRDLWWRRGPNPYGGAELWLVSNAPDADD 187

Query: 394 ------------APTWSPSGRSLIFSRKKDG 412
                        P WSP  + + F   +DG
Sbjct: 188 FFQLSDAPGMNYCPMWSPDSQLIFFVSDRDG 218



 Score = 43.9 bits (102), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 289 LQSNATE-----RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           L SNA +     +L++   +N    +SPDS  I F SDR+G E L+V    G   +RI+ 
Sbjct: 178 LVSNAPDADDFFQLSDAPGMNYCPMWSPDSQLIFFVSDRDGSENLWVAPREGGVAERITA 237

Query: 344 DKEASYFDPVWSPQGDLIAFTK 365
             +     P  S  G +IAF +
Sbjct: 238 FTDGRLLWPSISADGRMIAFER 259



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 5/74 (6%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           P   P G  IAF  ++G+ + + V    G  ERL    +N   P WSP G ++ ++  + 
Sbjct: 15  PSIDPAGSRIAFV-YAGDIWLVDV--SGGQAERLTAHPANHMLPRWSPDGSAIAYTSSRT 71

Query: 412 GDTGSKLYSIDLNG 425
           G     +Y + LNG
Sbjct: 72  GQ--GDVYVLPLNG 83


>gi|221212545|ref|ZP_03585522.1| WD40 domain protein beta Propeller [Burkholderia multivorans CGD1]
 gi|221167644|gb|EEE00114.1| WD40 domain protein beta Propeller [Burkholderia multivorans CGD1]
          Length = 640

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 44/227 (19%)

Query: 265 FSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSP-DSSQIVFESD 321
           FS +GK  + + ++D      +Y V +     +RLT+   ++ +A Y P D   I F S 
Sbjct: 75  FSPDGKWVVFTSERDGLGHASLYRVRIDGTGLQRLTDWTGVSDAAVYDPADPDVIAFVSS 134

Query: 322 RE-----GKEQLYVMQ------SNGSDQKRISQDKEASYFDPVWSPQGDLIAF-----TK 365
           R      G   ++ +        N +   R   DK  S+F P WSP G  IAF     T+
Sbjct: 135 RRDNDTWGTTNIWTLNLKTGALHNVTGDIRFDPDKPHSFFRPSWSPDGKWIAFSSDLGTE 194

Query: 366 FSGEKFAIGV----------MKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSR----- 408
           + G    +G           ++ DG+  R +   +     +P+WS  G+ ++F       
Sbjct: 195 WRGHNLPVGWERTQETAIYEIRPDGTGFRQIAARAGYADGSPSWSNDGKQIVFYETPVES 254

Query: 409 -------KKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVGFMD 447
                  +  G   S++  +D+  G  + L +TP +   PQ+VG  D
Sbjct: 255 TWGAHRPEAIGKVSSQIVQVDVATGVRKQLTDTPGFKVFPQYVGATD 301



 Score = 41.6 bits (96), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 86/217 (39%), Gaps = 47/217 (21%)

Query: 258 SMILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           S I +PR+S++GK+ +              M +Y  D Q        N  F+++    S 
Sbjct: 327 SGIRSPRYSADGKKVVYEKVVYSKPFHPNGMPLYRFDPQ-------WNYRFVDVFPQLSR 379

Query: 312 D------------SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           D            SS +V ++D      +Y   ++G D K ++    A  F P WSP   
Sbjct: 380 DGKSLVYTEKAVGSSIVVADTDFSHARHIYDPATSGLDPKLVAMGL-AGAFQPTWSPDKQ 438

Query: 360 LIAFTKFSGEKF--------AIGVMKKDGSQ----ERLLVEDSNLQAPTWSPSGRSLIFS 407
            + F    G  F         I  ++ DGS     E L     N   P++SP G  +++ 
Sbjct: 439 WVVFG--VGSWFFTRAHMPGRIARIRADGSMNGKPEILTDGKENAGFPSYSPDGTRIVYR 496

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINT-----PAYASD 439
              + D G ++  +DLN R   ++ T     P ++ D
Sbjct: 497 VWSETDKGLRI--LDLNTRKTMVLTTEPDNLPGWSPD 531



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 90/234 (38%), Gaps = 60/234 (25%)

Query: 189 IKNSLCVMDRDGANIRYL----TPSRDQIL--------FEPRFSPNQQKVAYATYDDEDI 236
           + +S+ V D D ++ R++    T   D  L        F+P +SP++Q V +        
Sbjct: 391 VGSSIVVADTDFSHARHIYDPATSGLDPKLVAMGLAGAFQPTWSPDKQWVVFGV-GSWFF 449

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            R ++        P RI   R+       S NGK  +++  K+ A               
Sbjct: 450 TRAHM--------PGRIARIRA-----DGSMNGKPEILTDGKENAG-------------- 482

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                      SYSPD ++IV+    E  + L ++  N      ++ + +     P WSP
Sbjct: 483 ---------FPSYSPDGTRIVYRVWSETDKGLRILDLNTRKTMVLTTEPDNL---PGWSP 530

Query: 357 QGDLIAFTKFS-----GEKFAIGV--MKKDGSQ-ERLLVEDSNLQAPTWSPSGR 402
            G  I FT+         KF   V  +K DG+   RL    +N    TW+  GR
Sbjct: 531 DGTRIVFTRKEVNPNDANKFHFDVYTIKPDGTDVRRLTPPGANQAHATWTWDGR 584


>gi|325919579|ref|ZP_08181591.1| amidohydrolase, imidazolonepropionase [Xanthomonas gardneri ATCC
           19865]
 gi|325549915|gb|EGD20757.1| amidohydrolase, imidazolonepropionase [Xanthomonas gardneri ATCC
           19865]
          Length = 1110

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 22/172 (12%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y++D      + ++  L  +   ++SPD   I F SDR G E L+ M+ +G D ++++
Sbjct: 98  DLYTLDADGGRAKAISRGLGFDSQPTFSPDGRWIAFVSDRSGAENLWRMRPDGRDAQQLT 157

Query: 343 -QDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLV---------EDS 390
             D +     P W+P G  +  ++F  S   + +     D S ERL+          E S
Sbjct: 158 FGDDDTVLVSPAWAPDGSALYASRFRWSVNDYELWRYGLDCS-ERLVAPVRAEGAGSEQS 216

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGS---KLYSI---DL-NGRNETLINTPA 435
            L A   SP GR L ++ ++ GD  S   +L+SI   DL  G+ ET++  P 
Sbjct: 217 TLGAVV-SPDGRQL-YAARRSGDKDSAELELWSIVRRDLATGKEETILPVPG 266


>gi|221196873|ref|ZP_03569920.1| WD40 domain protein beta Propeller [Burkholderia multivorans CGD2M]
 gi|221203543|ref|ZP_03576562.1| WD40 domain protein beta Propeller [Burkholderia multivorans CGD2]
 gi|221177477|gb|EEE09905.1| WD40 domain protein beta Propeller [Burkholderia multivorans CGD2]
 gi|221183427|gb|EEE15827.1| WD40 domain protein beta Propeller [Burkholderia multivorans CGD2M]
          Length = 640

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 44/227 (19%)

Query: 265 FSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSP-DSSQIVFESD 321
           FS +GK  + + ++D      +Y V +     +RLT+   ++ +A Y P D   I F S 
Sbjct: 75  FSPDGKWVVFTSERDGLGHASLYRVRIDGTGLQRLTDWTGVSDAAVYDPADPDVIAFVSS 134

Query: 322 RE-----GKEQLYVMQ------SNGSDQKRISQDKEASYFDPVWSPQGDLIAF-----TK 365
           R      G   ++ +        N +   R   DK  S+F P WSP G  IAF     T+
Sbjct: 135 RRDNDTWGTTNIWTLNLKTGALHNVTGDIRFDPDKPHSFFRPSWSPDGKWIAFSSDLGTE 194

Query: 366 FSGEKFAIGV----------MKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSR----- 408
           + G    +G           ++ DG+  R +   +     +P+WS  G+ ++F       
Sbjct: 195 WRGHNLPVGWERTQETAIYEIRPDGTGFRQIAARAGYADGSPSWSNDGKQIVFYETPVES 254

Query: 409 -------KKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVGFMD 447
                  +  G   S++  +D+  G  + L +TP +   PQ+VG  D
Sbjct: 255 TWGAHRPEAIGKVSSQIVQVDVATGVRKQLTDTPGFKVFPQYVGATD 301



 Score = 43.5 bits (101), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 87/217 (40%), Gaps = 47/217 (21%)

Query: 258 SMILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           S I +PR+S++GK+ +              M +Y  D Q        N  F+++    S 
Sbjct: 327 SGIRSPRYSADGKKVVYEKVVYSKPFHPNGMPLYRFDPQ-------WNYRFVDVFPQLSR 379

Query: 312 D------------SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           D            SS +V ++D      +Y   ++G D K ++    A  F P WSP   
Sbjct: 380 DGKSLVYTEKAVGSSIVVADTDFSHARHIYDPATSGLDPKLVAMGL-AGAFQPTWSPDKQ 438

Query: 360 LIAFTKFSGEKF--------AIGVMKKDGSQ----ERLLVEDSNLQAPTWSPSGRSLIFS 407
            +AF    G  F         I  ++ DGS     E L     N   P++SP G  +++ 
Sbjct: 439 WVAFG--VGSWFFTRAHMPGRIARIRADGSMNGKPEILTDGKENAGFPSYSPDGTRIVYR 496

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINT-----PAYASD 439
              + D G ++  +DLN R   ++ T     P ++ D
Sbjct: 497 VWSETDKGLRI--LDLNTRKTMVLTTEPDNLPGWSPD 531



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 91/234 (38%), Gaps = 60/234 (25%)

Query: 189 IKNSLCVMDRDGANIRYL----TPSRDQIL--------FEPRFSPNQQKVAYATYDDEDI 236
           + +S+ V D D ++ R++    T   D  L        F+P +SP++Q VA+        
Sbjct: 391 VGSSIVVADTDFSHARHIYDPATSGLDPKLVAMGLAGAFQPTWSPDKQWVAFGV-GSWFF 449

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            R ++        P RI   R+       S NGK  +++  K+ A               
Sbjct: 450 TRAHM--------PGRIARIRA-----DGSMNGKPEILTDGKENAG-------------- 482

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                      SYSPD ++IV+    E  + L ++  N      ++ + +     P WSP
Sbjct: 483 ---------FPSYSPDGTRIVYRVWSETDKGLRILDLNTRKTMVLTTEPDNL---PGWSP 530

Query: 357 QGDLIAFTKFS-----GEKFAIGV--MKKDGSQ-ERLLVEDSNLQAPTWSPSGR 402
            G  I FT+         KF   V  +K DG+   RL    +N    TW+  GR
Sbjct: 531 DGTRIVFTRKEVNPNDANKFHFDVYTIKPDGTDVRRLTPPGANQAHATWTWDGR 584


>gi|241204940|ref|YP_002976036.1| WD40 domain protein beta Propeller [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858830|gb|ACS56497.1| WD40 domain protein beta Propeller [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 275

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G++      +D+  DIY++ +   A  RLT+    N    YS D   I F S R G
Sbjct: 116 WSPDGRQLAYCGIRDDLFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYFNSSRTG 175

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVM 376
             Q++ +  +G+  ++++ D   ++F    SP  D++    +    F         + +M
Sbjct: 176 LMQIWRVHPDGTGLQQVTSDDYGNWFAHP-SPNNDMVLLLSYDPSVFDHPRDLDVRLRLM 234

Query: 377 KKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
             DG   + L E       +  P WSP G    + R
Sbjct: 235 DMDGGNLKTLFELFGGQGTINVPCWSPDGEEFAYVR 270



 Score = 43.1 bits (100), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 37/187 (19%), Positives = 85/187 (45%), Gaps = 14/187 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K+++ ++  +G   R +T +     +   +SP+ +++AY    D D+  +Y +      A
Sbjct: 89  KSAIYILPIEGGTPRLITENLPS--YWHGWSPDGRQLAYCGIRD-DLFDIYTISVD-GGA 144

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             R+ +       P +S++G+    +  +   M I+ V       +++T+  + N  A  
Sbjct: 145 ETRLTHGEGRNDGPDYSADGQWIYFNSSRTGLMQIWRVHPDGTGLQQVTSDDYGNWFAHP 204

Query: 310 SPDSSQI--------VFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGD 359
           SP++  +        VF+  R+   +L +M  +G + K + +    + +   P WSP G+
Sbjct: 205 SPNNDMVLLLSYDPSVFDHPRDLDVRLRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGE 264

Query: 360 LIAFTKF 366
             A+ ++
Sbjct: 265 EFAYVRY 271



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 19/151 (12%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAF- 363
           + ++SPD S ++   D      LY +  +G +  ++      +   D   SP G  I   
Sbjct: 27  APNFSPDGSYLLLNGD----GLLYRLPLDGGEVVKVDTGFAVNCNNDHGISPNGSEIVIS 82

Query: 364 --TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             T+F   K AI ++  +G   RL+ E+       WSP GR L +   +  D    +Y+I
Sbjct: 83  DKTEFG--KSAIYILPIEGGTPRLITENLPSYWHGWSPDGRQLAYCGIR--DDLFDIYTI 138

Query: 422 DLNGRNETLI-------NTPAYASDPQWVGF 445
            ++G  ET +       + P Y++D QW+ F
Sbjct: 139 SVDGGAETRLTHGEGRNDGPDYSADGQWIYF 169


>gi|163751698|ref|ZP_02158917.1| hypothetical amidohydrolase [Shewanella benthica KT99]
 gi|161328437|gb|EDP99593.1| hypothetical amidohydrolase [Shewanella benthica KT99]
          Length = 1058

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 15/153 (9%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NGK  +     D   DIY + +Q    + L   +   +  +YSPD   I F SD  G 
Sbjct: 41  SPNGKTIVF----DMLGDIYQIPMQGGEAKVLAKGIAWQMQPTYSPDGKYIAFTSDENGG 96

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMK 377
           + +++M ++GS+ + ++ +       P WSP    +   K         +GE +   V  
Sbjct: 97  DNIWIMDADGSNPRAVTDETFRLLNSPAWSPDSQYLVARKHYTGSRSLGAGEVWLYHVAG 156

Query: 378 KDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSR 408
            +G +  ER   E+ +L  P +SP GR + FS+
Sbjct: 157 GEGIKLTER-PNEEKDLGEPAYSPDGRYIYFSQ 188



 Score = 44.3 bits (103), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 72/157 (45%), Gaps = 20/157 (12%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTK 365
           A  SPD +++V+E+   GK  +  + +      R++  D +     P WS     I FT 
Sbjct: 350 AQVSPDGNKVVYEA--LGKLWVKSLSNKSDKHSRLTNLDADLRELYPQWSRDSRSIVFTT 407

Query: 366 FSGE-KFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG---------DT 414
           +  + +  + V++ ++   + L  E      PT+SP G  +++ + K G         DT
Sbjct: 408 WDDQDQGTVKVIRVRNKRIKTLTKEPGKYVEPTFSPDGSFVVYRKTKGGYITPKTWSQDT 467

Query: 415 GSKLYSIDLNGRNETLIN----TPAYASDPQWVGFMD 447
           G  LY +D+ G+  T I      P + +D Q V FMD
Sbjct: 468 G--LYKVDIKGKQNTRITPDGYQPQFGADSQRVYFMD 502



 Score = 43.9 bits (102), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 28/162 (17%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           ++NIS S  P+   IVF  D  G   +Y +   G + K +++   A    P +SP G  I
Sbjct: 35  WMNISVS--PNGKTIVF--DMLG--DIYQIPMQGGEAKVLAKGI-AWQMQPTYSPDGKYI 87

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSK-- 417
           AFT        I +M  DGS  R + +++   L +P WSP  + L+  +     TGS+  
Sbjct: 88  AFTSDENGGDNIWIMDADGSNPRAVTDETFRLLNSPAWSPDSQYLVARKHY---TGSRSL 144

Query: 418 ------LY------SIDLNGR--NETLINTPAYASDPQWVGF 445
                 LY       I L  R   E  +  PAY+ D +++ F
Sbjct: 145 GAGEVWLYHVAGGEGIKLTERPNEEKDLGEPAYSPDGRYIYF 186



 Score = 40.0 bits (92), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 16/133 (12%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD+E K Q+    +   +Q +I    E ++ +   SP G  I F    G+ + I +    
Sbjct: 7   SDKEPKWQVNAPANAPFEQVKIDV-SEGTWMNISVSPNGKTIVFDML-GDIYQIPMQ--- 61

Query: 380 GSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN------ET--L 430
           G + ++L +    Q  PT+SP G+ + F+  ++G  G  ++ +D +G N      ET  L
Sbjct: 62  GGEAKVLAKGIAWQMQPTYSPDGKYIAFTSDENG--GDNIWIMDADGSNPRAVTDETFRL 119

Query: 431 INTPAYASDPQWV 443
           +N+PA++ D Q++
Sbjct: 120 LNSPAWSPDSQYL 132



 Score = 36.6 bits (83), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 61/282 (21%), Positives = 112/282 (39%), Gaps = 57/282 (20%)

Query: 208 PSRDQILFEPRFSPNQQKVAYAT---------YDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           P+ ++ L EP +SP+ + + ++          Y  + +  +Y    +I R     G+   
Sbjct: 166 PNEEKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVKGIY----KIKRYDTETGDIEV 221

Query: 259 MI------LAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTL---------- 301
           ++      + P  S +G + L  +++D     +Y +DL+S   E+L   L          
Sbjct: 222 LVEGTGGAIRPTPSPDGTK-LAYIKRDGFQSSLYLLDLKSGKKEKLYGKLDRDMQETWAI 280

Query: 302 -FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--------------KRISQDKE 346
             +  + S++ D+ +IVF +   GK     ++S    Q               R  QD +
Sbjct: 281 HGVYPTMSWTADNQEIVFWAG--GKINKLDVESKSVKQIPFSVKTELTVQPAVRFEQDLD 338

Query: 347 ASYFD------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWS 398
              FD         SP G+ + +    G+ +   +  K     RL   D++L+   P WS
Sbjct: 339 KDVFDVKMLRMAQVSPDGNKVVYEAL-GKLWVKSLSNKSDKHSRLTNLDADLRELYPQWS 397

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
              RS++F+   D D G+       N R +TL   P    +P
Sbjct: 398 RDSRSIVFTTWDDQDQGTVKVIRVRNKRIKTLTKEPGKYVEP 439


>gi|134100530|ref|YP_001106191.1| amidohydrolase [Saccharopolyspora erythraea NRRL 2338]
 gi|291004991|ref|ZP_06562964.1| amidohydrolase [Saccharopolyspora erythraea NRRL 2338]
 gi|133913153|emb|CAM03266.1| amidohydrolase [Saccharopolyspora erythraea NRRL 2338]
          Length = 1054

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 3/150 (2%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           ++S+ +   A  RLT+ L       +SPD S+IVF+S ++G   L +   +G    R++ 
Sbjct: 52  LWSIPIGGGAAVRLTDVLQEAAEPDFSPDGSRIVFQSYQDGNFHLCLADRDGRGLTRLTS 111

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGR 402
                  +P +SP G  +AF   +  ++ I V+     +       S  +A P W+P G 
Sbjct: 112 GP-TDQREPRFSPDGTRVAFAAETDGRYGIHVLTLATGEIAAWTSGSAQEAQPVWTPDGS 170

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           ++ F+   D DT   +  +D +G   TL+ 
Sbjct: 171 AIAFTSSDD-DTPQAIDLVDAHGNRRTLVT 199



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 3/152 (1%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS +G R +    +D    +   D       RLT+         +SPD +++ F ++ 
Sbjct: 75  PDFSPDGSRIVFQSYQDGNFHLCLADRDGRGLTRLTSGPTDQREPRFSPDGTRVAFAAET 134

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGS 381
           +G+  ++V+ +  + +        A    PVW+P G  IAFT    +   AI ++   G+
Sbjct: 135 DGRYGIHVL-TLATGEIAAWTSGSAQEAQPVWTPDGSAIAFTSSDDDTPQAIDLVDAHGN 193

Query: 382 QERLL-VEDSNLQAPTWSPSGRSLIFSRKKDG 412
           +  L+ V + ++  PT+SP GR     R   G
Sbjct: 194 RRTLVTVSEGDIAGPTFSPDGRLGYVHRTPSG 225



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 62/149 (41%), Gaps = 2/149 (1%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           Q   EP FSP+  ++ + +Y D +   + L D R  R   R+ +  +    PRFS +G R
Sbjct: 70  QEAAEPDFSPDGSRIVFQSYQDGN-FHLCLAD-RDGRGLTRLTSGPTDQREPRFSPDGTR 127

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              + + D    I+ + L +      T+         ++PD S I F S  +   Q   +
Sbjct: 128 VAFAAETDGRYGIHVLTLATGEIAAWTSGSAQEAQPVWTPDGSAIAFTSSDDDTPQAIDL 187

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                +++ +    E     P +SP G L
Sbjct: 188 VDAHGNRRTLVTVSEGDIAGPTFSPDGRL 216



 Score = 40.0 bits (92), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 54/254 (21%), Positives = 98/254 (38%), Gaps = 54/254 (21%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-------ILAPRFSSN 268
           +P ++P+   +A+ + DD+    + L+D          GN R++       I  P FS +
Sbjct: 162 QPVWTPDGSAIAFTSSDDDTPQAIDLVDAH--------GNRRTLVTVSEGDIAGPTFSPD 213

Query: 269 GKRALIS-------------VQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSS 314
           G+   +              V  DE  D++    +  + + L  T    I   +     S
Sbjct: 214 GRLGYVHRTPSGTALVLDGKVVSDEGEDVFPFSARWLSADELLYTADGRIRRRALGGARS 273

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKR---ISQDKEA-SYFDPVWSPQGDLIAFTKFSGEK 370
            I F +      ++ V + +    +R    + D+       PV SP G  +AF    G+ 
Sbjct: 274 DIPFTA------EVSVREVSPPPTRRDFDSTADRAVKGIVGPVLSPDGTRVAFQAL-GDI 326

Query: 371 FAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG---------DTGSKLYS 420
           + +    +DG +   +V D      P WSP GR+L+++  + G         +TG     
Sbjct: 327 WVV----RDGEEPEAVVSDGGYNTGPAWSPDGRTLVYAGDRAGTLDLWLHDLETGQDRRL 382

Query: 421 IDLNGRNETLINTP 434
            DL G     + +P
Sbjct: 383 TDLEGDETGAVFSP 396


>gi|111221034|ref|YP_711828.1| putative serine/threonine protein kinase [Frankia alni ACN14a]
 gi|111148566|emb|CAJ60239.1| Putative serine/threonine protein kinase [Frankia alni ACN14a]
          Length = 770

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 77/158 (48%), Gaps = 12/158 (7%)

Query: 263 PRFSSNGKRALISVQKDEAMD----IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           P  S +G+  ++    DE  D    +Y V L  ++  RL  T       ++SPD  +I +
Sbjct: 577 PSLSPDGEFLVVRSSTDEKRDQNPGLYIVRLDGSSVRRL-KTKPQATDPAWSPDGERIAY 635

Query: 319 ESDREGKEQLYVM----QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            S+  G ++ +V+    + +   Q  I+ DK  +  DPVWSP GD IAFT+       I 
Sbjct: 636 WSNNAGGDRGFVVVISVEPDAVAQPVIN-DKLTTDSDPVWSPNGDKIAFTREQNGDLEIF 694

Query: 375 VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
            M  DGS  R L     + Q P + P GR ++FS ++D
Sbjct: 695 EMGSDGSDVRQLTHARGDDQDPAFGPDGR-IVFSGQRD 731



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 87/179 (48%), Gaps = 23/179 (12%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D  P   G+ ++++   + S N  +A+ +    + + +++    +N T      +  +  
Sbjct: 523 DMLPAISGDRKTVVFFKKGSPNTLQAIAADGTGKPVQLFTSGPAANLT------IANDAR 576

Query: 307 ASYSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            S SPD   +V  S     R+    LY+++ +GS  +R+    +A+  DP WSP G+ IA
Sbjct: 577 PSLSPDGEFLVVRSSTDEKRDQNPGLYIVRLDGSSVRRLKTKPQAT--DPAWSPDGERIA 634

Query: 363 F--TKFSGEKFAIGVM--KKDGSQERL----LVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +      G++  + V+  + D   + +    L  DS+   P WSP+G  + F+R+++GD
Sbjct: 635 YWSNNAGGDRGFVVVISVEPDAVAQPVINDKLTTDSD---PVWSPNGDKIAFTREQNGD 690


>gi|295687564|ref|YP_003591257.1| amidohydrolase [Caulobacter segnis ATCC 21756]
 gi|295429467|gb|ADG08639.1| amidohydrolase [Caulobacter segnis ATCC 21756]
          Length = 1111

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 11/137 (8%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +      R+   L  +    +SPD  +I F SDR G + ++VM  +GSD+++++
Sbjct: 88  DIYTLPIAGGTPTRIAEGLAYDQQPRFSPDGKRIAFTSDRAGGDNIWVMNVDGSDKRQVT 147

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIG---VMKKDGSQERLLVEDSN------ 391
           +++      P WSP G  I   K   +G     G   V    G     LV+ ++      
Sbjct: 148 KEEFRLLNQPSWSPDGRFIVAKKHFTTGRSLGTGEVWVYHVSGGGGVQLVKRASEALQKE 207

Query: 392 LQAPTWSPSGRSLIFSR 408
           L  P ++  G+S+ ++R
Sbjct: 208 LGEPIYAADGKSVFYTR 224



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 61/120 (50%), Gaps = 8/120 (6%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFT 364
           AS SPD   +VFE+      +L++  ++G + +R+    + + F+  P WS  G  + F 
Sbjct: 386 ASVSPDGKSVVFET----LGKLWIKPASGGEPRRLVTGGDEAAFELYPSWSRDGRTVVFV 441

Query: 365 KFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            ++  G      V    G+ + ++ +  +  AP +SP G++++F R++ G   S  +S D
Sbjct: 442 SWTDAGLGRLRTVAASGGAAKDVIAQPGHYGAPRFSPDGKTIVFERRRGGGLTSSRWSQD 501



 Score = 39.7 bits (91), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 32/209 (15%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-AS 308
           P RI    +    PRFS +GKR   +  +    +I+ +++  +   ++T   F  ++  S
Sbjct: 99  PTRIAEGLAYDQQPRFSPDGKRIAFTSDRAGGDNIWVMNVDGSDKRQVTKEEFRLLNQPS 158

Query: 309 YSPDSSQIV----FESDRE---GKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGD 359
           +SPD   IV    F + R    G+  +Y +   G  Q  KR S+  +    +P+++  G 
Sbjct: 159 WSPDGRFIVAKKHFTTGRSLGTGEVWVYHVSGGGGVQLVKRASEALQKELGEPIYAADGK 218

Query: 360 LIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQA---------------PTWSPSGR 402
            + +T+    G  F      +D +     +E  +L+                PT SP G 
Sbjct: 219 SVFYTRNVTPGPIFE---YAQDSNTALFDIERYDLETGEVTTAVSGLGGSVRPTPSPDGG 275

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            + F R++   T SKLY  DL    E  I
Sbjct: 276 KIAFVRRE--RTKSKLYVKDLTSGEERKI 302


>gi|262383138|ref|ZP_06076275.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262296016|gb|EEY83947.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 304

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 9/180 (5%)

Query: 266 SSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           S++GK+  IS   ++D    +Y++  +     RL   L  +    +SPD  Q+ + ++R 
Sbjct: 98  SADGKQIAISNGTKEDGKSRVYTLPFEG-GVPRLITPLGPSYLHGWSPDGKQLAYCAERN 156

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G   +YV+ S G ++KR++   E     P +SP G  I F         +  MK DGS++
Sbjct: 157 GNFDVYVIPSLGGEEKRLTT-AEGLDDGPEYSPCGQYIWFNSVRTGLMQVWRMKADGSEQ 215

Query: 384 RLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             +   E  N   P  SP G+ ++F     GD     +   L  +N  L   PA   +P+
Sbjct: 216 TQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEPGQH---LANKNVELRLMPAEGGEPK 272



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 15/157 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GK+     +++   D+Y +       +RLT    ++    YSP    I F S R G
Sbjct: 142 WSPDGKQLAYCAERNGNFDVYVIPSLGGEEKRLTTAEGLDDGPEYSPCGQYIWFNSVRTG 201

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFA-----I 373
             Q++ M+++GS+Q +++ D+  + + P  SP G  I F  ++      G+  A     +
Sbjct: 202 LMQVWRMKADGSEQTQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEPGQHLANKNVEL 261

Query: 374 GVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIF 406
            +M  +G + + LV+       +   +W+P  +   F
Sbjct: 262 RLMPAEGGEPKTLVKLFGGQGTINVNSWAPDSKRFAF 298


>gi|163788836|ref|ZP_02183281.1| peptidase S41 [Flavobacteriales bacterium ALC-1]
 gi|159876073|gb|EDP70132.1| peptidase S41 [Flavobacteriales bacterium ALC-1]
          Length = 1090

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 88/187 (47%), Gaps = 15/187 (8%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESD 321
           P  S  GKRA+     +   +I++V  ++   + +TN+  + + S  +SP   +I + SD
Sbjct: 307 PNLSPKGKRAIF----EHRGEIFTVPKENGTWKNITNSPGVADRSPIWSPKGDKIAWFSD 362

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           + G+ QL +   +G + + I       YF P WSP G  IA   +S   + + ++  +  
Sbjct: 363 KGGEYQLMLADQDGQNAEAIKLPNPTFYFQPDWSPDGKYIA---YSDTHYNVWILNLETK 419

Query: 382 QERLLVED-----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-A 435
           + R +  D     +    P WSP  + + F +++D    S +++ +++ +    +  P A
Sbjct: 420 KTRKVATDRYAHPNRTMNPVWSPDSKWIAFPKQQDSHFKS-IFAYNVDSKKTIQLTDPIA 478

Query: 436 YASDPQW 442
            A  P W
Sbjct: 479 DAITPVW 485



 Score = 37.4 bits (85), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 1/81 (1%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D++   +      RLT+      S  +S D   I F +  +G   ++VM S G + KR
Sbjct: 39  ANDLWKASVNGGTAIRLTSDDGYESSPHFSNDGKMIAFTAQYDGNVDVFVMPSEGGEPKR 98

Query: 341 ISQDKEASYFDPVWSPQGDLI 361
           ++      +    W+P G+++
Sbjct: 99  LTYHPGGDFVQ-GWTPDGNVL 118


>gi|86357985|ref|YP_469877.1| putative periplasmic component of the Tol biopolymer transport
           system [Rhizobium etli CFN 42]
 gi|86282087|gb|ABC91150.1| putative periplasmic component of the Tol biopolymer transport
           system [Rhizobium etli CFN 42]
          Length = 275

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 13/156 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G++      +D+  DIY++ +   A  RLT+    N    YS D   I F S R G
Sbjct: 116 WSPDGRQLAYCGIRDDLFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYFNSSRTG 175

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVM 376
             Q++ +  +G+  ++++ D + ++F    SP+ D +    +    F         + +M
Sbjct: 176 LMQIWRIHPDGTGLEQVTSDNQGNWFAHP-SPRNDKVLILSYDPSVFDHPRDLDVRLRLM 234

Query: 377 KKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
             DG   + L E       +  P WSP G    + R
Sbjct: 235 DMDGGNLKTLFELFGGQGTINVPCWSPDGEEFAYVR 270



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 45/221 (20%), Positives = 96/221 (43%), Gaps = 29/221 (13%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H IS D  + +  +K +F                K+++ ++  +G   R +T  R+Q  +
Sbjct: 70  HGISPDGTEIVISDKSEFG---------------KSAIYILPIEGGTPRLVT--RNQPSY 112

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              +SP+ +++AY    D D+  +Y +      A  R+ +       P +S++G+    +
Sbjct: 113 WHGWSPDGRQLAYCGIRD-DLFDIYTISVD-GGAETRLTHGEGRNDGPDYSADGQWIYFN 170

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--------VFESDREGKEQ 327
             +   M I+ +       E++T+    N  A  SP + ++        VF+  R+   +
Sbjct: 171 SSRTGLMQIWRIHPDGTGLEQVTSDNQGNWFAHPSPRNDKVLILSYDPSVFDHPRDLDVR 230

Query: 328 LYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKF 366
           L +M  +G + K + +    + +   P WSP G+  A+ ++
Sbjct: 231 LRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGEEFAYVRY 271



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 15/149 (10%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFT 364
           + ++SPD S ++   D      L+ +  +G +  R+      +   D   SP G  I  +
Sbjct: 27  APNFSPDGSYLLLNGD----GLLFRLPLDGGEVVRVDTGFAVNCNNDHGISPDGTEIVIS 82

Query: 365 -KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            K    K AI ++  +G   RL+  +       WSP GR L +   +  D    +Y+I +
Sbjct: 83  DKSEFGKSAIYILPIEGGTPRLVTRNQPSYWHGWSPDGRQLAYCGIR--DDLFDIYTISV 140

Query: 424 NGRNETLI-------NTPAYASDPQWVGF 445
           +G  ET +       + P Y++D QW+ F
Sbjct: 141 DGGAETRLTHGEGRNDGPDYSADGQWIYF 169


>gi|114798295|ref|YP_761023.1| amidohydrolase family protein [Hyphomonas neptunium ATCC 15444]
 gi|114738469|gb|ABI76594.1| amidohydrolase family protein [Hyphomonas neptunium ATCC 15444]
          Length = 1077

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 1/91 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +      RLT+ + ++    +SPD   ++F SDR G E L++M ++G + ++IS
Sbjct: 84  DIYTLPVSGGKAARLTSGMAMDSQPVWSPDGKAVLFVSDRSGAENLWLMDADGGNPRQIS 143

Query: 343 -QDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             D    +  P W+P G  I  T++  ++ A
Sbjct: 144 LYDDNPVFVSPEWAPDGKSILVTRYWADRNA 174


>gi|255035493|ref|YP_003086114.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Dyadobacter fermentans DSM 18053]
 gi|254948249|gb|ACT92949.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Dyadobacter fermentans DSM 18053]
          Length = 652

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 73/177 (41%), Gaps = 18/177 (10%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           + S G R            IY +     A E LT+  F   S ++SPD   I F S+R  
Sbjct: 154 YKSKGGRGRPIYADRAQTHIYRIPAAGGAPEPLTSGPFNEHSTTWSPDGRYIAFVSNRTD 213

Query: 325 K------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---------E 369
           +       +++ +  +      +S  +  +Y  P WSP+G  IAF    G         E
Sbjct: 214 RPDDIQQSEIWKVDIHSKAITPLSDHRGLAY-QPAWSPKGGHIAFLATPGQTGTNDSPAE 272

Query: 370 KFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              I ++  DG Q R L +  D  ++   W PSG+ + F+    GDT     SI+ N
Sbjct: 273 DTHIALIPADGGQMRYLTKSLDRRIEHLRWHPSGKYIYFTAGDRGDTSVYRVSIENN 329


>gi|94970511|ref|YP_592559.1| WD-40-like beta propeller repeat-containing protein [Candidatus
           Koribacter versatilis Ellin345]
 gi|94552561|gb|ABF42485.1| WD40-like beta Propeller [Candidatus Koribacter versatilis
           Ellin345]
          Length = 367

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/239 (20%), Positives = 108/239 (45%), Gaps = 32/239 (13%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY----LMDTRIDRAP-KRIGNFRSM 259
           Y  PS ++ILF    + N +      Y    +  +Y    +   + D +  K++ + +  
Sbjct: 115 YWFPSGERILFSSTHAANAECPPKPDYSKGYVWPIYDTYQIYTAKADGSDLKQLTHEKGY 174

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                 + +GK  + +  ++  +DIY++D   +  ++LT+ L  +    +S D  +IV+ 
Sbjct: 175 NAEATITRDGKHIVFTSTRNGDLDIYTMDADGSHVKQLTHELGYDGGPFWSYDGKKIVYR 234

Query: 320 SD--------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +                     R G  +L+VM ++GS++ +++++  A+ F P W P G 
Sbjct: 235 AQHPKNAEEEKDYRDLLGKGLIRPGNLELWVMNADGSNKHQVTRNGAAN-FAPYWLPDGK 293

Query: 360 LIAFTKF-----SGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            I F        +G  F + ++ +DG+ QER+         P ++  G+ L+++  ++G
Sbjct: 294 RIIFASNQADPKNGRDFDLYIINEDGTGQERITFHPDFDGFPMFTSDGKRLVWASNRNG 352



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 27/173 (15%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           IY+     +  ++LT+    N  A+ + D   IVF S R G   +Y M ++GS  K+++ 
Sbjct: 155 IYTAKADGSDLKQLTHEKGYNAEATITRDGKHIVFTSTRNGDLDIYTMDADGSHVKQLTH 214

Query: 344 DKEASY-FDPVWSPQG--------------------DLIAFTKFSGEKFAIGVMKKDGSQ 382
             E  Y   P WS  G                    DL+           + VM  DGS 
Sbjct: 215 --ELGYDGGPFWSYDGKKIVYRAQHPKNAEEEKDYRDLLGKGLIRPGNLELWVMNADGSN 272

Query: 383 ERLLVEDSNLQ-APTWSPSGRSLIF-SRKKDGDTGS--KLYSIDLNGRNETLI 431
           +  +  +     AP W P G+ +IF S + D   G    LY I+ +G  +  I
Sbjct: 273 KHQVTRNGAANFAPYWLPDGKRIIFASNQADPKNGRDFDLYIINEDGTGQERI 325


>gi|294138815|ref|YP_003554793.1| amidohydrolase family protein [Shewanella violacea DSS12]
 gi|293325284|dbj|BAJ00015.1| amidohydrolase family protein [Shewanella violacea DSS12]
          Length = 1079

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 13/152 (8%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NGK  +     D   DIY + +Q    + L   +   +  +YSPD   I F SD  G 
Sbjct: 62  SPNGKTIVF----DMLGDIYQIPMQGGEAKVLAKGIAWQMQPTYSPDGKYIAFTSDENGG 117

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEK----FAIGVMKKDG 380
           + +++M ++GS+ + ++ +       P WSP    L+A   ++G +      + +    G
Sbjct: 118 DNIWIMDADGSNPRAVTDETFRLLNSPAWSPDSQYLVARKHYTGSRSLGAGEVWLYHIAG 177

Query: 381 SQERLLVEDSN----LQAPTWSPSGRSLIFSR 408
            +   L E  N    L  P +SP GR + FS+
Sbjct: 178 GEGIKLTERPNEQKDLGEPAYSPDGRYIYFSQ 209



 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 69/157 (43%), Gaps = 20/157 (12%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTK 365
           A  SPD  ++V+E+   GK  +  + +      R+++ D E     P WS     + FT 
Sbjct: 371 AQVSPDGKKVVYEA--LGKLWIKSLSNKSDKHSRLTKLDSELRELYPQWSRDSRSVVFTT 428

Query: 366 FSGEKFAIGVMK----KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-------DT 414
           +  ++   G +K    ++   + L  E      PT+SP G  +++ + K G         
Sbjct: 429 WDDQQ--QGTVKVVSVRNKRSKTLTKEPGKYVEPTFSPDGSFVVYRKAKGGYITPKTWSQ 486

Query: 415 GSKLYSIDLNGRNETLIN----TPAYASDPQWVGFMD 447
            + LY +D+ G+  T I      P + +D + V FMD
Sbjct: 487 NTGLYKVDIQGKQNTRITPDGYQPQFGADSERVYFMD 523



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 9/113 (7%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           ++NIS S  P+   IVF  D  G   +Y +   G + K +++   A    P +SP G  I
Sbjct: 56  WMNISVS--PNGKTIVF--DMLG--DIYQIPMQGGEAKVLAKGI-AWQMQPTYSPDGKYI 108

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDG 412
           AFT        I +M  DGS  R + +++   L +P WSP  + L+  +   G
Sbjct: 109 AFTSDENGGDNIWIMDADGSNPRAVTDETFRLLNSPAWSPDSQYLVARKHYTG 161



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 67/133 (50%), Gaps = 16/133 (12%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD+  K Q+    +   +Q +I    E ++ +   SP G  I F    G+ + I +    
Sbjct: 28  SDKAAKWQVNAPTNAPFEQVKIDV-SEGTWMNISVSPNGKTIVFDML-GDIYQIPMQ--- 82

Query: 380 GSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN------ET--L 430
           G + ++L +    Q  PT+SP G+ + F+  ++G  G  ++ +D +G N      ET  L
Sbjct: 83  GGEAKVLAKGIAWQMQPTYSPDGKYIAFTSDENG--GDNIWIMDADGSNPRAVTDETFRL 140

Query: 431 INTPAYASDPQWV 443
           +N+PA++ D Q++
Sbjct: 141 LNSPAWSPDSQYL 153


>gi|298676136|ref|YP_003727885.1| APHP domain-containing protein [Methanohalobium evestigatum Z-7303]
 gi|298289124|gb|ADI75089.1| APHP domain protein [Methanohalobium evestigatum Z-7303]
          Length = 1914

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 103/213 (48%), Gaps = 17/213 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFS--PNQQKVAYATYDDEDILRVYLMD----TRI 246
           + +M+ DG+N   +   +    +  RFS  P+  K+A + +     +R+   D    T I
Sbjct: 615 VIIMNPDGSNKETILTGQK---YANRFSWSPDGSKIAVSGHIGNQGIRIINADGSGLTEI 671

Query: 247 DRAPKR--IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +   R     ++S I +P    +G + +    ++   DIY++++      +LT     +
Sbjct: 672 SQGYFRPQTQPWQSQIWSP----DGSKIVYHSDENGNRDIYTINIDGTDRTQLTTNSAKD 727

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             + +SPD S+IVF S+REG   +++M  +GS++ +++ +     + P W+P G  IAF+
Sbjct: 728 TDSFFSPDGSKIVFVSNREGNNDIWMMNVDGSNKTQLTVNSADDMY-PTWNPDGTKIAFS 786

Query: 365 KFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPT 396
                 + I +++ K+    R ++ D  +   T
Sbjct: 787 SNRAGNYDIWLIELKEDINHRPVINDIQVNPST 819



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 9/172 (5%)

Query: 263 PRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           P +S  G   +   S+  +E  DIY V + +     LTN   I     +SPD ++I+++ 
Sbjct: 502 PVWSPTGNEIVFGKSIPTEEKYDIYKVSVDNKYESVLTNLPNIEGHPRWSPDGNKILYKK 561

Query: 321 DR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMK 377
           D   G   +++M S+GS Q  ++ D ++     VWSP G  I +           + +M 
Sbjct: 562 DNTNGWYNVWIMNSDGSSQTALTNDAQSEC--AVWSPSGSKIVYKHSDNSDLPEDVIIMN 619

Query: 378 KDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            DGS +E +L         +WSP G  +  S    G+ G ++ + D +G  E
Sbjct: 620 PDGSNKETILTGQKYANRFSWSPDGSKIAVSGHI-GNQGIRIINADGSGLTE 670



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 352 PVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           P WSP G+ I + K +    + + +M  DGS +  L  D+  +   WSPSG  +++    
Sbjct: 548 PRWSPDGNKILYKKDNTNGWYNVWIMNSDGSSQTALTNDAQSECAVWSPSGSKIVYKHSD 607

Query: 411 DGDTGSKLYSIDLNGRN-ETLINTPAYASDPQW 442
           + D    +  ++ +G N ET++    YA+   W
Sbjct: 608 NSDLPEDVIIMNPDGSNKETILTGQKYANRFSW 640



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 105/241 (43%), Gaps = 25/241 (10%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI- 274
            PR+SP+  K+ Y   +      V++M++          + +S      +S +G + +  
Sbjct: 547 HPRWSPDGNKILYKKDNTNGWYNVWIMNSDGSSQTALTNDAQSECAV--WSPSGSKIVYK 604

Query: 275 -SVQKDEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            S   D   D+  ++   SN    LT   + N   S+SPD S+I   S   G + + ++ 
Sbjct: 605 HSDNSDLPEDVIIMNPDGSNKETILTGQKYAN-RFSWSPDGSKIAV-SGHIGNQGIRIIN 662

Query: 333 SNGSDQKRISQDKEASYFDP--------VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           ++GS    ISQ     YF P        +WSP G  I +         I  +  DG+   
Sbjct: 663 ADGSGLTEISQ----GYFRPQTQPWQSQIWSPDGSKIVYHSDENGNRDIYTINIDGTDRT 718

Query: 385 LLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD--PQ 441
            L  +S     + +SP G  ++F   ++G+  + ++ ++++G N+T + T   A D  P 
Sbjct: 719 QLTTNSAKDTDSFFSPDGSKIVFVSNREGN--NDIWMMNVDGSNKTQL-TVNSADDMYPT 775

Query: 442 W 442
           W
Sbjct: 776 W 776



 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 351 DPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFS 407
           +PVWSP G+ I F K   + EK+ I  +  D   E +L    N++  P WSP G  +++ 
Sbjct: 501 NPVWSPTGNEIVFGKSIPTEEKYDIYKVSVDNKYESVLTNLPNIEGHPRWSPDGNKILY- 559

Query: 408 RKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
            KKD   G   ++ ++ +G ++T +   A +    W
Sbjct: 560 -KKDNTNGWYNVWIMNSDGSSQTALTNDAQSECAVW 594


>gi|254444922|ref|ZP_05058398.1| hypothetical protein VDG1235_3165 [Verrucomicrobiae bacterium
           DG1235]
 gi|198259230|gb|EDY83538.1| hypothetical protein VDG1235_3165 [Verrucomicrobiae bacterium
           DG1235]
          Length = 504

 Score = 60.5 bits (145), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 76/156 (48%), Gaps = 15/156 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           ++ + K+ + + Q+++  +I+++D+++     LTN   ++    Y+PD   + F S R G
Sbjct: 342 WTPDAKKLIFTGQRNDQWNIWTIDIETKKEVALTNNNTLDDGPEYTPDGKYVYFNSVRTG 401

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----------KFAIG 374
             Q++ M+++GS+Q++++ D    +F P +SP G  + +  F  +          K  + 
Sbjct: 402 TMQIWRMKADGSEQEQVTFDAYNDWF-PHFSPDGKWMVYISFPVDIDPNDHPFYKKVYLR 460

Query: 375 VMKKDGSQER----LLVEDSNLQAPTWSPSGRSLIF 406
           +M   G   +    L      +  P+WSP    + F
Sbjct: 461 LMPASGGVPKTIAYLYGGQGTINVPSWSPDSSKIAF 496


>gi|89889850|ref|ZP_01201361.1| putative periplasmic component of the Tol biopolymer transport
           system [Flavobacteria bacterium BBFL7]
 gi|89518123|gb|EAS20779.1| putative periplasmic component of the Tol biopolymer transport
           system [Flavobacteria bacterium BBFL7]
          Length = 376

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 29/195 (14%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++ DI+  DL+ N T +LTN    +   + SP   +IVF SDR G  +LY M  +GS+ K
Sbjct: 161 DSYDIFVADLEGNITAQLTNEKGYDAEPTVSPQGDKIVFTSDRSGDLELYTMDIDGSNVK 220

Query: 340 RISQD---KEASYFDPVWS--------PQG--------DLIAFTKFSGEKFAIGVMKKDG 380
           +I+ +      ++F P  S        P+         DL+        +  + +   DG
Sbjct: 221 QITYELGYDGGAFFSPDGSQLIFRSSRPKTEEEIKEYKDLLKVGLVQPTEMELYICNADG 280

Query: 381 SQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTG--SKLYSIDLNG-------RNETL 430
           S  R L +  N   +P + P G+ ++FS   + + G    LY I+ +G         ET 
Sbjct: 281 SDLRQLTQLGNANWSPFFLPDGKRVLFSSNFEAERGFPFNLYMINTDGTGLERITHGETF 340

Query: 431 INTPAYASDPQWVGF 445
              P ++++ +++ F
Sbjct: 341 DAFPVFSNNGKYLAF 355



 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 30/216 (13%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           K  +  YD  DI  V  ++  I     ++ N +     P  S  G + + +  +   +++
Sbjct: 154 KYVWPIYDSYDIF-VADLEGNI---TAQLTNEKGYDAEPTVSPQGDKIVFTSDRSGDLEL 209

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------------------ 326
           Y++D+  +  +++T  L  +  A +SPD SQ++F S R   E                  
Sbjct: 210 YTMDIDGSNVKQITYELGYDGGAFFSPDGSQLIFRSSRPKTEEEIKEYKDLLKVGLVQPT 269

Query: 327 --QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEK---FAIGVMKKDG 380
             +LY+  ++GSD ++++Q   A++  P + P G  + F + F  E+   F + ++  DG
Sbjct: 270 EMELYICNADGSDLRQLTQLGNANW-SPFFLPDGKRVLFSSNFEAERGFPFNLYMINTDG 328

Query: 381 SQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTG 415
           +    +       A P +S +G+ L FS  ++   G
Sbjct: 329 TGLERITHGETFDAFPVFSNNGKYLAFSSNRNNGGG 364


>gi|268315824|ref|YP_003289543.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Rhodothermus marinus DSM 4252]
 gi|262333358|gb|ACY47155.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Rhodothermus marinus DSM 4252]
          Length = 497

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 15/161 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G+  + + ++D   DIY + ++     RLT+T  ++    YSPD   I F S R G
Sbjct: 334 WSPDGRYLVYTAERDGDYDIYRIPVEGGEEVRLTDTPGLDDGPEYSPDGRYIYFNSVRSG 393

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF------SGEKF----AIG 374
             Q++ M+ +G++ ++++ D   ++F P  SP G  + F  +      S   F     + 
Sbjct: 394 TMQIWRMRPDGTEPEQLTDDAFNNWF-PHVSPDGRWVLFLSYLPDVDPSDHPFYRLVYLR 452

Query: 375 VMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKD 411
           +M   G   R++         L   +W+P  R   F    D
Sbjct: 453 MMPAAGGSPRVVAYLYGGQGTLNVNSWAPDSRHAAFVSNSD 493



 Score = 40.0 bits (92), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 6/96 (6%)

Query: 351 DPVWSPQGDLIAFTKFS---GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           D V SP G  +  +  +   G +  I V+  +G   R +          WSP GR L+++
Sbjct: 285 DHVLSPDGRWLGLSHHAPEYGGRSIIYVVPIEGGTPRQVTPTGPSYLHGWSPDGRYLVYT 344

Query: 408 RKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQW 442
            ++DGD    +Y I + G  E  L +TP     P++
Sbjct: 345 AERDGDY--DIYRIPVEGGEEVRLTDTPGLDDGPEY 378



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 7/75 (9%)

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           D + +  + G    + +  + G ++ L   ++++QAP W+P GR+LI++  +DG     L
Sbjct: 209 DFVPYQDYIGSLLEV-LDVETGRRKVLYTSEASIQAPNWTPDGRALIYN--QDG----LL 261

Query: 419 YSIDLNGRNETLINT 433
           Y  DL  R  ++I T
Sbjct: 262 YRFDLATRRPSVIPT 276


>gi|221632929|ref|YP_002522151.1| acylaminoacyl-peptidase [Thermomicrobium roseum DSM 5159]
 gi|221156779|gb|ACM05906.1| acylaminoacyl-peptidase [Thermomicrobium roseum DSM 5159]
          Length = 309

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 99/219 (45%), Gaps = 26/219 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRI--------DRAPKRIGNFRSM-----ILAPR 264
           R+SP+ ++VA+    D     +Y+ DT          +R P   G++  +      L+P 
Sbjct: 53  RWSPDGRRVAFVRLGDA-YSDLYIADTSTGEIRQLTRNRPPFTPGSYEYVQNAVWALSPA 111

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINI-SASYSPDSSQIVF-- 318
           +S +G+R +    ++   +   +   +  T  L   T  L  N+   ++SPD S+IVF  
Sbjct: 112 WSPDGQRLVYVSDRNTLKNFLWLIPSAGGTPELIQATTRLGDNVDQPAFSPDGSRIVFIH 171

Query: 319 ----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
               E   + +  L+++     +   + Q  +  Y  P WSP G  I +    GE   + 
Sbjct: 172 RVTREDGLQRRTDLWIVDLRSGNLTPLVQGGDGQYA-PAWSPDGQWIVYVGRHGESNDLF 230

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-KKDG 412
           ++   G Q   + +   + +PTWSP GR++ + + ++DG
Sbjct: 231 LVPAMGGQPIQITDSGVVASPTWSPDGRAIAYLQLERDG 269



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 20/176 (11%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLM-------DTRIDRAPKRIGNFRSMILAPRFSS 267
             P +SP+ Q++ Y +  D + L+ +L           + +A  R+G+    +  P FS 
Sbjct: 108 LSPAWSPDGQRLVYVS--DRNTLKNFLWLIPSAGGTPELIQATTRLGD---NVDQPAFSP 162

Query: 268 NGKRALI--SVQKDEAM----DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +G R +    V +++ +    D++ VDL+S     L        + ++SPD   IV+   
Sbjct: 163 DGSRIVFIHRVTREDGLQRRTDLWIVDLRSGNLTPLVQGGDGQYAPAWSPDGQWIVYVGR 222

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                 L+++ + G    +I+     +   P WSP G  IA+ +   + FA+ V++
Sbjct: 223 HGESNDLFLVPAMGGQPIQITDSGVVA--SPTWSPDGRAIAYLQLERDGFAVYVLE 276



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/169 (20%), Positives = 72/169 (42%), Gaps = 29/169 (17%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK----EASY---------FDPV 353
           A +SPD  ++ F    +    LY+  ++  + +++++++      SY           P 
Sbjct: 52  ARWSPDGRRVAFVRLGDAYSDLYIADTSTGEIRQLTRNRPPFTPGSYEYVQNAVWALSPA 111

Query: 354 WSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSR 408
           WSP G  + +   + + + F   +    G+ E +        N+  P +SP G  ++F  
Sbjct: 112 WSPDGQRLVYVSDRNTLKNFLWLIPSAGGTPELIQATTRLGDNVDQPAFSPDGSRIVFIH 171

Query: 409 KKDGDTG----SKLYSIDLNGRNETLI-------NTPAYASDPQWVGFM 446
           +   + G    + L+ +DL   N T +         PA++ D QW+ ++
Sbjct: 172 RVTREDGLQRRTDLWIVDLRSGNLTPLVQGGDGQYAPAWSPDGQWIVYV 220


>gi|168702262|ref|ZP_02734539.1| probable TolB protein [Gemmata obscuriglobus UQM 2246]
          Length = 342

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 84/169 (49%), Gaps = 10/169 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDRE 323
           +S++GK+ + S      + +++++      +R+T+     N    +SPD +++VF +DR+
Sbjct: 170 YSADGKKIVYSAGNAGNVQLFTMNADGTNVKRITDVANCYNGGPFFSPDGTRVVFRADRK 229

Query: 324 GKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------KFSGEKFAIGV 375
            K+  QLYV+ ++G+ +K ++ D +  Y+ P W      I +T        +   + +  
Sbjct: 230 EKDRLQLYVINADGTGEKALTSDDKWVYWAPYWYKDNRHIIYTGADHSNPIAPPNYDLHW 289

Query: 376 MKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           M  + G + R+         P ++P G  ++++  ++G   ++LY  D 
Sbjct: 290 MDTETGKKTRITFAPGQDVLPVFNPDGTKVMWTSSREGGRAAQLYIADF 338



 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 94/247 (38%), Gaps = 44/247 (17%)

Query: 202 NIRYLTPSRDQI-LFEPRFSPNQQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFR 257
           NIR LT   D +   E  FSP+  +V +   + +      ++++MD R  +A  RI    
Sbjct: 29  NIRQLT--TDYVRAGEGYFSPDGTRVIFQAEEKDTGNPFYQIFIMDLRTGKA-TRISPGV 85

Query: 258 SMILAPRFSSNGKRALISVQK--------------------------------DEAMDIY 285
                  F  +GKR L +                                   D  M IY
Sbjct: 86  GRTTCGYFHPDGKRVLFASSHSDPDAKKHQEAEVKQREEDKKKGVRRRYSWDFDPHMKIY 145

Query: 286 SVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
              L     + LT +        SYS D  +IV+ +   G  QL+ M ++G++ KRI+  
Sbjct: 146 EAGLDGTGLKCLTPDAKVYTAEGSYSADGKKIVYSAGNAGNVQLFTMNADGTNVKRITDV 205

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSN--LQAPTWSPS 400
                  P +SP G  + F     EK    + V+  DG+ E+ L  D      AP W   
Sbjct: 206 ANCYNGGPFFSPDGTRVVFRADRKEKDRLQLYVINADGTGEKALTSDDKWVYWAPYWYKD 265

Query: 401 GRSLIFS 407
            R +I++
Sbjct: 266 NRHIIYT 272



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 11/148 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPK 251
           L  M+ DG N++ +T   +     P FSP+  +V + A   ++D L++Y+++        
Sbjct: 189 LFTMNADGTNVKRITDVANCYNGGPFFSPDGTRVVFRADRKEKDRLQLYVINADGTGEKA 248

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLFIN 304
              + + +  AP +  +  R +I    D +        D++ +D ++    R+T     +
Sbjct: 249 LTSDDKWVYWAPYWYKD-NRHIIYTGADHSNPIAPPNYDLHWMDTETGKKTRITFAPGQD 307

Query: 305 ISASYSPDSSQIVFESDREGKE--QLYV 330
           +   ++PD +++++ S REG    QLY+
Sbjct: 308 VLPVFNPDGTKVMWTSSREGGRAAQLYI 335



 Score = 37.4 bits (85), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 40/217 (18%), Positives = 84/217 (38%), Gaps = 43/217 (19%)

Query: 265 FSSNGKRALISVQKDEAMD----IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-- 318
           FS +G R +   ++ +  +    I+ +DL++    R++  +       + PD  +++F  
Sbjct: 45  FSPDGTRVIFQAEEKDTGNPFYQIFIMDLRTGKATRISPGVGRTTCGYFHPDGKRVLFAS 104

Query: 319 -ESDREGKEQ-----------------------------LYVMQSNGSDQKRISQDKEAS 348
             SD + K+                              +Y    +G+  K ++ D +  
Sbjct: 105 SHSDPDAKKHQEAEVKQREEDKKKGVRRRYSWDFDPHMKIYEAGLDGTGLKCLTPDAKVY 164

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIF 406
             +  +S  G  I ++  +     +  M  DG+  + + + +N     P +SP G  ++F
Sbjct: 165 TAEGSYSADGKKIVYSAGNAGNVQLFTMNADGTNVKRITDVANCYNGGPFFSPDGTRVVF 224

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              +      +LY I+ +G  E      A  SD +WV
Sbjct: 225 RADRKEKDRLQLYVINADGTGEK-----ALTSDDKWV 256


>gi|103486587|ref|YP_616148.1| amidohydrolase [Sphingopyxis alaskensis RB2256]
 gi|98976664|gb|ABF52815.1| amidohydrolase [Sphingopyxis alaskensis RB2256]
          Length = 1078

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 11/137 (8%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V ++     R+   L       ++PD  +I F SDR G + +++M  +GSD++++S
Sbjct: 76  DIYTVPIEGGTPTRIAEGLAYEHQPRFAPDGKRIAFVSDRGGGDNVWIMNRDGSDKRQVS 135

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-----VMKKDGSQERLLVEDSN------ 391
           ++       P WSP G  +   K      ++G     +    G     LV+  +      
Sbjct: 136 KEDFRLLNQPNWSPDGQFLVAKKHFTTSRSLGTGEVWIYHVSGGAGVPLVKKPDERHQKE 195

Query: 392 LQAPTWSPSGRSLIFSR 408
           L  P ++P G+S+ ++R
Sbjct: 196 LGEPIFAPDGKSVYYTR 212



 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 11/121 (9%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTK 365
           A  SPD   IVFE+      +L+V  + G   +R++  K+A+    P WS  G  I F +
Sbjct: 374 AEVSPDGRSIVFET----LGKLWVKPATGGTARRLTSAKDAAMEAWPSWSRDGKSIVFVR 429

Query: 366 FS----GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           ++    GE    G     GS  ++     +   P +SP  R+++F  ++ G   S+ +  
Sbjct: 430 WTDAGLGEIHVTGA--SGGSSRKVTATPGHYAEPRFSPDDRTIVFEWRRGGGLVSERWGE 487

Query: 422 D 422
           D
Sbjct: 488 D 488



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 88/208 (42%), Gaps = 34/208 (16%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-AS 308
           P RI    +    PRF+ +GKR      +    +++ ++   +   +++   F  ++  +
Sbjct: 87  PTRIAEGLAYEHQPRFAPDGKRIAFVSDRGGGDNVWIMNRDGSDKRQVSKEDFRLLNQPN 146

Query: 309 YSPDSSQIV----FESDRE-GKEQLYVMQSNGSDQ----KRISQDKEASYFDPVWSPQGD 359
           +SPD   +V    F + R  G  ++++   +G       K+  +  +    +P+++P G 
Sbjct: 147 WSPDGQFLVAKKHFTTSRSLGTGEVWIYHVSGGAGVPLVKKPDERHQKELGEPIFAPDGK 206

Query: 360 LIAFTK------------------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
            + +T+                  F  E++++    +DGS   +   +     PT SP G
Sbjct: 207 SVYYTRNVTPGPIFEYAQDSNRDLFHIERYSL----EDGSISTVASGNGGAVRPTPSPDG 262

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           + L F R++     SKLY  DL    ET
Sbjct: 263 KRLAFVRREGAR--SKLYVKDLASGAET 288


>gi|116620277|ref|YP_822433.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223439|gb|ABJ82148.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 880

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 7/153 (4%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDL-----QSNATERLTNTLFINISASYSPDSSQIVFES 320
           S+ G R L+ +Q    +DIY  DL     +   + RL ++    ++A  SPD S+I F S
Sbjct: 583 SAKGDR-LVYIQTSLDIDIYRQDLPQAGEKPPPSVRLISSTRTEMNARISPDGSKIAFPS 641

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           DR G  +++V  SNG    R++         P WS     IAF         + V++  G
Sbjct: 642 DRTGSWEIWVAASNGEHPVRLTSFGAGETGTPRWSADSRQIAFDARVRGNAEVYVVEASG 701

Query: 381 SQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            + R LV  S     P+WS  G+ + F   + G
Sbjct: 702 GKPRPLVTGSADNFGPSWSHDGKWVYFISNRLG 734



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 49/227 (21%), Positives = 100/227 (44%), Gaps = 12/227 (5%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLC-VMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Q  T  KGD   R++++  S+   I +  L    ++   ++R ++ +R ++    R SP+
Sbjct: 579 QVATSAKGD---RLVYIQTSLDIDIYRQDLPQAGEKPPPSVRLISSTRTEM--NARISPD 633

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEA 281
             K+A+ + D      +++  +  +  P R+ +F +     PR+S++ ++     +    
Sbjct: 634 GSKIAFPS-DRTGSWEIWVAASNGEH-PVRLTSFGAGETGTPRWSADSRQIAFDARVRGN 691

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++Y V+        L      N   S+S D   + F S+R G+EQ++ M   G    ++
Sbjct: 692 AEVYVVEASGGKPRPLVTGSADNFGPSWSHDGKWVYFISNRLGQEQVWKMPVAGGPAIQL 751

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +       F+   S  G  +  T+   +  +I  +  DG  E  LVE
Sbjct: 752 THGGAVCGFE---STDGKWVYVTRAYEQPTSIWRVPADGGDEVKLVE 795


>gi|332883942|gb|EGK04222.1| hypothetical protein HMPREF9456_01250 [Dysgonomonas mossii DSM
           22836]
          Length = 306

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 76/165 (46%), Gaps = 19/165 (11%)

Query: 261 LAPRF----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           LAP +    S +G       ++ +  D+YS+  +    +RLTN+  ++    YSPD + I
Sbjct: 134 LAPSYLHGWSPDGLYLTYCAERKDNYDVYSIPAKGGVEKRLTNSDGLDDGPEYSPDGNYI 193

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---------- 366
            F S R G  Q++ M+ +G+ Q +++ D+  + + P  SP G L+ F  +          
Sbjct: 194 WFNSVRTGLMQIWRMKIDGTKQTQMTFDETRNSWFPHISPNGQLVVFIAYYKGDLKPDEH 253

Query: 367 -SGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIF 406
              +   + +M  +G + + L +       +   +WSP  + + F
Sbjct: 254 LPNKNVELRIMPTNGGEPKTLTKLFGGQGTINVNSWSPDSKYIAF 298


>gi|239997142|ref|ZP_04717666.1| amidohydrolase [Alteromonas macleodii ATCC 27126]
          Length = 714

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y V +       LT     NI  S SPD  QI F SD++G   ++VM  +GS+ ++++
Sbjct: 82  DLYKVSMSGGDATPLTQDFAWNIHPSISPDGKQIAFISDKDGLSNVWVMDIDGSNLRQVT 141

Query: 343 QDKEASYFDPVWSPQGDLIAFTK 365
           ++K      P WSP G+ +  TK
Sbjct: 142 KEKSNLIHSPKWSPDGEYLVVTK 164



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 14/149 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V D     I+ LT   D   + PRFS + + + Y T++D+D+  V ++  R  +  K 
Sbjct: 398 LYVRDVKSGKIKRLTKQNDHDEYYPRFSNDGKSIVYTTWNDQDLGTVRVVSARGGKG-KV 456

Query: 253 IGNFRSMILAPRFSSNGKRA---------LISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           +       + P FS++G++          L+  +      IY  DL+ +  E++++  + 
Sbjct: 457 VTQQPGHYIEPSFSADGEKVVFRKFTGGYLLDPKYSVEPGIYVADLEKDTVEKVSDGGY- 515

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +A ++ ++ ++ F ++  G E  Y  Q
Sbjct: 516 --NAHFAGNNDRVYF-TESAGGEAYYETQ 541


>gi|301311762|ref|ZP_07217687.1| tol biopolymer transport system, periplasmic protein [Bacteroides
           sp. 20_3]
 gi|300830322|gb|EFK60967.1| tol biopolymer transport system, periplasmic protein [Bacteroides
           sp. 20_3]
          Length = 304

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 9/180 (5%)

Query: 266 SSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           S++GK+  IS   ++D    IY++  +     RL   L  +    +SPD  Q+ + ++R 
Sbjct: 98  SADGKQIAISNGTKEDGRSRIYTLPFEG-GVPRLITPLGPSYLHGWSPDGKQLAYCAERN 156

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G   +YV+ + G ++KR++   E     P +SP G  I F         +  MK DGS++
Sbjct: 157 GNFDVYVIPALGGEEKRLTT-AEGLDDGPEYSPCGQYIWFNSVRTGLMQVWRMKADGSEQ 215

Query: 384 RLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             +   E  N   P  SP G+ ++F     GD     +   L  +N  L   PA   +P+
Sbjct: 216 TQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEPGQH---LANKNVELRLMPAEGGEPK 272



 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 15/157 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GK+     +++   D+Y +       +RLT    ++    YSP    I F S R G
Sbjct: 142 WSPDGKQLAYCAERNGNFDVYVIPALGGEEKRLTTAEGLDDGPEYSPCGQYIWFNSVRTG 201

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFA-----I 373
             Q++ M+++GS+Q +++ D+  + + P  SP G  I F  ++      G+  A     +
Sbjct: 202 LMQVWRMKADGSEQTQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEPGQHLANKNVEL 261

Query: 374 GVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIF 406
            +M  +G + + LV+       +   +W+P  +   F
Sbjct: 262 RLMPAEGGEPKTLVKLFGGQGTINVNSWAPDSKRFAF 298


>gi|150009575|ref|YP_001304318.1| Tol biopolymer transport system periplasmic protein
           [Parabacteroides distasonis ATCC 8503]
 gi|298373967|ref|ZP_06983925.1| tol biopolymer transport system, periplasmic protein [Bacteroides
           sp. 3_1_19]
 gi|149937999|gb|ABR44696.1| periplasmic component of the Tol biopolymer transport system
           [Parabacteroides distasonis ATCC 8503]
 gi|298268335|gb|EFI09990.1| tol biopolymer transport system, periplasmic protein [Bacteroides
           sp. 3_1_19]
          Length = 304

 Score = 60.5 bits (145), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 9/180 (5%)

Query: 266 SSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           S++GK+  IS   ++D    IY++  +     RL   L  +    +SPD  Q+ + ++R 
Sbjct: 98  SADGKQIAISNGTKEDGRSRIYTLPFEG-GVPRLITPLGPSYLHGWSPDGKQLAYCAERN 156

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G   +YV+ + G ++KR++   E     P +SP G  I F         +  MK DGS++
Sbjct: 157 GNFDVYVIPALGGEEKRLTT-AEGLDDGPEYSPCGQYIWFNSVRTGLMQVWRMKADGSEQ 215

Query: 384 RLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             +   E  N   P  SP G+ ++F     GD     +   L  +N  L   PA   +P+
Sbjct: 216 TQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEPGQH---LANKNVELRLMPAEGGEPK 272



 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 15/157 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GK+     +++   D+Y +       +RLT    ++    YSP    I F S R G
Sbjct: 142 WSPDGKQLAYCAERNGNFDVYVIPALGGEEKRLTTAEGLDDGPEYSPCGQYIWFNSVRTG 201

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFA-----I 373
             Q++ M+++GS+Q +++ D+  + + P  SP G  I F  ++      G+  A     +
Sbjct: 202 LMQVWRMKADGSEQTQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEPGQHLANKNVEL 261

Query: 374 GVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIF 406
            +M  +G + + LV+       +   +W+P  +   F
Sbjct: 262 RLMPAEGGEPKTLVKLFGGQGTINVNSWAPDSKRFAF 298


>gi|256838294|ref|ZP_05543804.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739213|gb|EEU52537.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 306

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 9/180 (5%)

Query: 266 SSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           S++GK+  IS   ++D    IY++  +     RL   L  +    +SPD  Q+ + ++R 
Sbjct: 100 SADGKQIAISNGTKEDGRSRIYTLPFEG-GVPRLITPLGPSYLHGWSPDGKQLAYCAERN 158

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G   +YV+ + G ++KR++   E     P +SP G  I F         +  MK DGS++
Sbjct: 159 GNFDVYVIPALGGEEKRLTT-AEGLDDGPEYSPCGQYIWFNSVRTGLMQVWRMKADGSEQ 217

Query: 384 RLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             +   E  N   P  SP G+ ++F     GD     +   L  +N  L   PA   +P+
Sbjct: 218 TQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEPGQH---LANKNVELRLMPAEGGEPK 274



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 15/157 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GK+     +++   D+Y +       +RLT    ++    YSP    I F S R G
Sbjct: 144 WSPDGKQLAYCAERNGNFDVYVIPALGGEEKRLTTAEGLDDGPEYSPCGQYIWFNSVRTG 203

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFA-----I 373
             Q++ M+++GS+Q +++ D+  + + P  SP G  I F  ++      G+  A     +
Sbjct: 204 LMQVWRMKADGSEQTQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEPGQHLANKNVEL 263

Query: 374 GVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIF 406
            +M  +G + + LV+       +   +W+P  +   F
Sbjct: 264 RLMPAEGGEPKTLVKLFGGQGTINVNSWAPDSKRFAF 300


>gi|40062542|gb|AAR37487.1| tolB protein, putative [uncultured marine bacterium 106]
          Length = 442

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 71/308 (23%), Positives = 131/308 (42%), Gaps = 36/308 (11%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           RK+   ++D   ++  G +G   SRI + ++   S   KN + +   DG  ++       
Sbjct: 152 RKLGLKLADWFVENTLGFEGVSTSRISYTAQK--SNRRKN-IFLSSFDGTVLK------- 201

Query: 212 QILFEPRFSPN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA------- 262
                 RFS N     ++  ++D  +IL   L  +    A +     R+ IL+       
Sbjct: 202 ------RFSYNLGSNNLSSWSFDGNNILYTTLTRSSAQLAIQPAKRLRAKILSFPSGFQP 255

Query: 263 --PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               ++ +G+  L+++ K    DIY+  L++    ++     +  S   SPD  +I F S
Sbjct: 256 LSASWNLDGESILLTLMKQGNADIYNYHLENAQLNKIFAWKSLETSPQMSPDGRKIAFVS 315

Query: 321 D--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           D  R  + Q+Y+   N    +R++     +   P WSP G  + + +     F + +   
Sbjct: 316 DSARPRRPQIYIHNLNTLKTERVTFKGNFNS-SPNWSPNGTQLIYERQEKGYFQLYIYTL 374

Query: 379 DGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPA- 435
              +  +L     N + P W+P+G+ ++FS KK      KLY I    GR   +  TP+ 
Sbjct: 375 STRRHLQLTFGRFNSEKPDWAPNGKQIVFSAKKKNV--PKLYYISSFGGRTIRVTKTPSN 432

Query: 436 -YASDPQW 442
              ++P W
Sbjct: 433 IAETNPVW 440



 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 9/144 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILR--VYLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKRA 272
           P+ SP+ +K+A+ + D     R  +Y+ +    +  +    GNF S   +P +S NG + 
Sbjct: 302 PQMSPDGRKIAFVS-DSARPRRPQIYIHNLNTLKTERVTFKGNFNS---SPNWSPNGTQL 357

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +   Q+     +Y   L +    +LT   F +    ++P+  QIVF + ++   +LY + 
Sbjct: 358 IYERQEKGYFQLYIYTLSTRRHLQLTFGRFNSEKPDWAPNGKQIVFSAKKKNVPKLYYIS 417

Query: 333 SNGSDQKRISQD-KEASYFDPVWS 355
           S G    R+++     +  +PVWS
Sbjct: 418 SFGGRTIRVTKTPSNIAETNPVWS 441


>gi|297182007|gb|ADI18182.1| periplasmic component of the tol biopolymer transport system
           [uncultured delta proteobacterium HF0200_39N20]
          Length = 428

 Score = 60.1 bits (144), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 22/230 (9%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---------PRFSSNGKRALISVQKDE 280
           ++D+++IL      ++   A +     RS ILA           +  +GK  L+++ K  
Sbjct: 202 SFDNKNILYTTFTRSKAQLALQPSIRLRSKILAFPAGSQPLGASWHPDGKSILLTLMKQG 261

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQ 338
             DIYS +L     E L N   +  S   SPD  +I F SD     + Q+Y+        
Sbjct: 262 NADIYSYNLSDAILESLFNWKSLETSPHMSPDGKKIAFVSDAAYPRRPQIYIHNLATEKT 321

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI---GVMKKDGSQERLLVEDSNLQAP 395
           +R++     +   P WSP    +A+ +     F +    ++ +   Q  L     + + P
Sbjct: 322 ERVTFKGNYNS-SPKWSPDSTQLAYERQKKNIFQLYKYNLLTRRHVQ--LTFGRHDFEKP 378

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASD--PQW 442
            WSP+G+ +IFS K      SKLY I    GR   +  +P   S+  P W
Sbjct: 379 DWSPNGKQIIFSAKM--KKVSKLYYISSFGGRTIRVTKSPPNISETNPVW 426


>gi|260062216|ref|YP_003195296.1| hypothetical protein RB2501_11502 [Robiginitalea biformata
           HTCC2501]
 gi|88783778|gb|EAR14949.1| hypothetical protein RB2501_11502 [Robiginitalea biformata
           HTCC2501]
          Length = 1150

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 6/143 (4%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++         LT  L   +   +SPD   +++ SD+ G E +++M     ++ +++
Sbjct: 80  DIYTIPATGGTATALTRGLPYEVHPRFSPDGKSLLYISDKSGSENIWIMDLESREETQLT 139

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPS 400
           + +   YF   WSP G  +               ++ G   +LL +  NL+   P +SP 
Sbjct: 140 KSENKHYFSADWSPDGTYVVGAAGRRNIKLHLYHREGGGGSQLLDKPENLKTIDPAFSPD 199

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL 423
           G+ + FSR+    TG+  Y+  L
Sbjct: 200 GKRIYFSRR----TGAWNYNAQL 218



 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 12/173 (6%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFE 319
           + PRFS +GK  L    K  + +I+ +DL+S    +LT +   +  SA +SPD + +V  
Sbjct: 102 VHPRFSPDGKSLLYISDKSGSENIWIMDLESREETQLTKSENKHYFSADWSPDGTYVVGA 161

Query: 320 SDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--------EK 370
           + R   K  LY  +  G  Q  + + +     DP +SP G  I F++ +G         +
Sbjct: 162 AGRRNIKLHLYHREGGGGSQ-LLDKPENLKTIDPAFSPDGKRIYFSRRTGAWNYNAQLPQ 220

Query: 371 FAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           + IG    +DG    +     +   PT SP G+ L+F  + +  TG +L +++
Sbjct: 221 YQIGTYDMEDGGSAVITSRYGSAFTPTPSPDGKWLVFGSRYEEHTGLRLRNLE 273



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 1/104 (0%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +Y ++L   A  RLT+  F     ++SPD  ++VF   + G   LY ++++G    R   
Sbjct: 382 LYVMELPDGAPRRLTDHEFTEAQPAWSPDGGELVFSGWQPGGGHLYKVRTDGRGGARAIT 441

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLL 386
                Y  P WS   D I F +   + +  G      GS+E L+
Sbjct: 442 RVPGIYSQPAWSYNSDRIVFLRGYAQAYDEGTGPNTRGSREDLV 485



 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 9/95 (9%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           D V SP G  +AFT  +     + VM+  DG+  RL   +     P WSP G  L+FS  
Sbjct: 364 DAVPSPDGKHLAFTALN----RLYVMELPDGAPRRLTDHEFTEAQPAWSPDGGELVFSGW 419

Query: 410 KDGDTGSKLYSIDLNGRN--ETLINTPAYASDPQW 442
           + G  G  LY +  +GR     +   P   S P W
Sbjct: 420 QPG--GGHLYKVRTDGRGGARAITRVPGIYSQPAW 452


>gi|182416136|ref|YP_001821202.1| WD40 domain-containing protein [Opitutus terrae PB90-1]
 gi|177843350|gb|ACB77602.1| WD40 domain protein beta Propeller [Opitutus terrae PB90-1]
          Length = 518

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 31/217 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLM----DTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           F   Q  +++ T +D+    VY +     T +   PK    F        +S +GK  + 
Sbjct: 307 FDGKQLGISHHTAEDDGRSVVYKLPSTGGTPVRVTPKSPSYFHG------WSPDGKWMVY 360

Query: 275 SVQKDEA------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           +  + E        DIY +        RLTN+  ++    +S D   I F S R G  QL
Sbjct: 361 TGGRKETPGGPDKYDIYKISADGGEEVRLTNSPGLSDGPEFSRDGQWIYFNSTRTGLMQL 420

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----------KFAIGVMKK 378
           + M+ +GS Q++++ D+  ++F P  SP G  IAF  +  +          +  + +M  
Sbjct: 421 WRMRPDGSGQEQLTNDEFNNWF-PHLSPDGKWIAFISYGQDVKPSEHPYYKQVYLRLMPA 479

Query: 379 DGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKD 411
            G Q R++         +  P+W+P    + F    D
Sbjct: 480 SGGQPRVIAYVYGGQGTINVPSWAPDSTRIAFVSNTD 516


>gi|242310687|ref|ZP_04809842.1| translocation protein TolB [Helicobacter pullorum MIT 98-5489]
 gi|239523085|gb|EEQ62951.1| translocation protein TolB [Helicobacter pullorum MIT 98-5489]
          Length = 426

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 148/344 (43%), Gaps = 41/344 (11%)

Query: 108 AQVLVTGRVIKE-GKDRLRVEFRLWDVKDRKQIIGKKFFSSPA-SWRKIAHTISDDIYQS 165
           A++ +  RV  E  +D L V  +L+D       + K++ +S A ++  +AH ++ DI   
Sbjct: 91  AKIDLIARVSAEILQDGLVVNLQLYDANSGTLALSKEYKNSRAETYPFLAHKLAIDINDY 150

Query: 166 ITGEKGDFNSRILFVSESVVSG-----------IIKNSLCVMDRDGANIRYLTPSRDQIL 214
           I     D+  RI+ VS     G             KNSL    + G NI           
Sbjct: 151 IQAPNVDWMERIVVVSYYTKPGESEILLSDYTLTYKNSLI---KGGLNIF---------- 197

Query: 215 FEPRFSPNQQKVAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             P+++  QQ   Y T Y D+  L  Y + T  +    +I +   M++A   S +  + L
Sbjct: 198 --PKWANEQQNAFYYTKYLDKPTLFKYDLTTGQN---TQIISSEGMLVASDVSKDSTKIL 252

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +++  +E  DI+  D+ S    +LTN   I++S ++  D  +++F SDR G   ++ +  
Sbjct: 253 LTMAPNEQADIFLYDIPSAKLTKLTNYRGIDVSGNFIEDEKRVMFISDRLGYPNVFAISV 312

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLV 387
            G     + Q       +   +  G+ I ++       FS   F + ++       R L 
Sbjct: 313 EGEANGSLEQMVFHGRNNNAANAFGEYIVYSSRETNEDFSRNTFNLYLVSTKSDFIRRLS 372

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +   Q P +S  G ++++ + +     S L  I LN  N+TL+
Sbjct: 373 ANGINQLPRFSKDGETIMYVKHESNQ--SALGIIRLN-YNKTLL 413


>gi|305432653|ref|ZP_07401814.1| translocation protein TolB [Campylobacter coli JV20]
 gi|304444364|gb|EFM37016.1| translocation protein TolB [Campylobacter coli JV20]
          Length = 403

 Score = 60.1 bits (144), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 10/195 (5%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P++   +Q + Y T  D D   +Y  D R ++A K + +   M++A   S +G + L+++
Sbjct: 179 PKWGNKEQSIFYYTAYDHDRPTLYRYDLRTNKASKILAS-GGMVVASDVSLDGSKLLVTM 237

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQ-SN 334
              +  D+Y  DL S    +LTN   I+++ ++   D S+ VF SDR G   +++   +N
Sbjct: 238 APKDQPDVYLYDLNSKNLTQLTNYSGIDVNGNFIGVDDSKFVFVSDRLGYPNIFIQNLNN 297

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDSN 391
           GS ++ +   K  S      S   D + ++     +   F I +M  + +  R    +  
Sbjct: 298 GSAEQAVFHGKNNS----AVSTYKDFLVYSSREPNQVGVFNIYLMSINSTGIRQFTANGK 353

Query: 392 LQAPTWSPSGRSLIF 406
              P +S  G S++F
Sbjct: 354 NLFPRFSSDGGSIVF 368


>gi|109896795|ref|YP_660050.1| amidohydrolase [Pseudoalteromonas atlantica T6c]
 gi|109699076|gb|ABG38996.1| amidohydrolase [Pseudoalteromonas atlantica T6c]
          Length = 1113

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 70/155 (45%), Gaps = 16/155 (10%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NG++ +     D   D+Y   +       LT     NI  ++SPD  +I F SDR G 
Sbjct: 71  SPNGEKFVF----DMLGDLYVSSIGGGEATSLTQDFAWNIQPTFSPDGKKIAFISDRGGM 126

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMK 377
             ++VM S+GS+  +++++K      P WSP G  I   K         +GE +      
Sbjct: 127 SNVWVMNSDGSNLVQVTKEKNNLIHSPKWSPDGQYIVANKGIMSSRSIPAGEIWLYHHSG 186

Query: 378 KDGSQERLLVEDS----NLQAPTWSPSGRSLIFSR 408
            DG   +  V  +    N+  P +SP G+ L +++
Sbjct: 187 GDGMVLKKRVHGNPDQKNIADPAFSPDGKYLYYTQ 221



 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 28/189 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L + +     ++ LT   D   + PR+S + +K+ + T++D+D+  V  +     R+ K 
Sbjct: 400 LYIKEIKSGKVKRLTRQNDHDEYYPRYSHDGKKIVFTTWNDKDLGSVRTVSAS-GRSEKV 458

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAM-----------DIYSVDLQSNATERLTNTL 301
           I       + P FS++ K  LI+  K                IY+  ++     R+    
Sbjct: 459 ISKEPGHFIEPSFSTDDK--LITYNKKTGGYLLAPEYSVEPGIYTATVKGEKHRRVAK-- 514

Query: 302 FINISA-SYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKR--ISQDKEASYFDPVW 354
             N SA  ++ D+S++ F     G    ++QL  +  NG D++      DK A Y     
Sbjct: 515 --NGSAPHFAGDNSRVYFTESVSGSDYPEQQLVSVDLNGEDKREHLYGGDKIAEY---RL 569

Query: 355 SPQGDLIAF 363
           SP    IAF
Sbjct: 570 SPDKKWIAF 578


>gi|221233054|ref|YP_002515490.1| TolB protein [Caulobacter crescentus NA1000]
 gi|220962226|gb|ACL93582.1| TolB protein [Caulobacter crescentus NA1000]
          Length = 1115

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 17/140 (12%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +      R+   L  +    +SPD  +I F SDR G + ++VM  +G D+++++
Sbjct: 93  DIYTMPITGGTPTRIAEGLAYDQQPRFSPDGKRIAFTSDRGGGDNIWVMNLDGGDKRQVT 152

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQ------ERLLVE 388
           +++      P WSP G  I   K         +GE +   V    G Q      E+L  E
Sbjct: 153 KEEFRLLNQPSWSPDGRFIVAKKHFTTGRSLGTGEVWVYHVSGGGGVQLVKRASEQLQKE 212

Query: 389 DSNLQAPTWSPSGRSLIFSR 408
              L  P ++  G+S+ ++R
Sbjct: 213 ---LGEPIYAADGKSVFYTR 229



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 17/124 (13%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTK 365
           AS SPD   +VFE+      +L++  + G + +R +S D++A    P WS  G  I F  
Sbjct: 391 ASVSPDGKSVVFET----LGKLWIKSTAGGEARRLVSGDEDAFELYPSWSRDGRTIVFVS 446

Query: 366 FSGEKF-------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           ++           A G + KD     ++ +  +  AP +SP G++++F R++ G   S  
Sbjct: 447 WTDAGLGRLRTVPAAGGVGKD-----VIAQPGHYGAPRFSPDGKTIVFERRRGGGLTSGR 501

Query: 419 YSID 422
           +S D
Sbjct: 502 WSQD 505



 Score = 43.5 bits (101), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 32/209 (15%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-AS 308
           P RI    +    PRFS +GKR   +  +    +I+ ++L      ++T   F  ++  S
Sbjct: 104 PTRIAEGLAYDQQPRFSPDGKRIAFTSDRGGGDNIWVMNLDGGDKRQVTKEEFRLLNQPS 163

Query: 309 YSPDSSQIV----FESDRE---GKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGD 359
           +SPD   IV    F + R    G+  +Y +   G  Q  KR S+  +    +P+++  G 
Sbjct: 164 WSPDGRFIVAKKHFTTGRSLGTGEVWVYHVSGGGGVQLVKRASEQLQKELGEPIYAADGK 223

Query: 360 LIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQA---------------PTWSPSGR 402
            + +T+    G  F      +D +     +E  +L+                PT SP G+
Sbjct: 224 SVFYTRNVTPGPIFE---YAQDSNTALFDIERYDLETGEVTTAVSGLGGSVRPTPSPDGK 280

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            + F R++   T SKLY  DL    E  I
Sbjct: 281 KIAFVRRE--RTKSKLYVKDLTSGEERKI 307


>gi|238507612|ref|XP_002385007.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
 gi|220688526|gb|EED44878.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
          Length = 647

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 41/227 (18%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P +  ++   R  P+  ++  A  D  +  ++   ++R D                 FS 
Sbjct: 47  PGKKGVMLMNRIGPSSSELYVANIDGSNERKLLGNNSRFD-------------YHASFSP 93

Query: 268 NGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG- 324
           +G+    + ++  D   D+Y      +  E+L  T  +  +   SPD+S++ + S   G 
Sbjct: 94  DGQWITFTSERNGDGNSDLYRCRADGSGLEKLVATSSVEDAGVLSPDASKVAWVSTANGY 153

Query: 325 KEQLYVMQSNGSDQKRISQ--------DKEASYFDPVWSPQGDLIAF-----TKFSG--- 368
              ++VM     +Q+ ++          K   YF P WSP G+ IAF     T++ G   
Sbjct: 154 TTNVWVMDLKTGEQRNLTNLEGVKGDPTKPNGYFRPSWSPDGEWIAFSSDRNTEWRGHGN 213

Query: 369 -------EKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIF 406
                  ++ ++ V++ DG+  R +   E  +L +P WSP G  +IF
Sbjct: 214 GTGWEHTQELSVYVIRPDGTDFRKIASREGWSLGSPRWSPDGSRIIF 260



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 65/307 (21%), Positives = 117/307 (38%), Gaps = 86/307 (28%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY----DDEDILRVYLM 242
           G   + L V + DG+N R L  +  +  +   FSP+ Q + + +      + D+ R    
Sbjct: 59  GPSSSELYVANIDGSNERKLLGNNSRFDYHASFSPDGQWITFTSERNGDGNSDLYRCRAD 118

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            + +++         + +L+P  S   K A +S       +++ +DL++     LTN   
Sbjct: 119 GSGLEKLVATSSVEDAGVLSPDAS---KVAWVSTANGYTTNVWVMDLKTGEQRNLTNLEG 175

Query: 303 IN---------ISASYSPDSSQIVFESDRE----------GKEQ-----LYVMQSNGSDQ 338
           +             S+SPD   I F SDR           G E      +YV++ +G+D 
Sbjct: 176 VKGDPTKPNGYFRPSWSPDGEWIAFSSDRNTEWRGHGNGTGWEHTQELSVYVIRPDGTDF 235

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---------------------FA----- 372
           ++I+  +  S   P WSP G  I F + + E                      FA     
Sbjct: 236 RKIASREGWSLGSPRWSPDGSRIIFYEITTENTWDAHRPESVASATSQIVSVDFATGLDR 295

Query: 373 --------------------IGVMKKDGSQERL---------LVEDSNLQAPTWSPSGRS 403
                               IG + K GS E +          V +  +++P+WSP G+S
Sbjct: 296 IQHTNGTGVKVSPQYVTADNIGYLIKGGSSEGIHYTAESSTGTVINGTMRSPSWSPDGKS 355

Query: 404 LIFSRKK 410
           +++ + +
Sbjct: 356 VVYEKSE 362



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 23/162 (14%)

Query: 269 GKRALISVQK--DEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDR--E 323
           GK+ ++ + +    + ++Y  ++  SN  + L N    +  AS+SPD   I F S+R  +
Sbjct: 48  GKKGVMLMNRIGPSSSELYVANIDGSNERKLLGNNSRFDYHASFSPDGQWITFTSERNGD 107

Query: 324 GKEQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKD 379
           G   LY  +++GS  +++   S  ++A     V SP    +A+ +  +G    + VM   
Sbjct: 108 GNSDLYRCRADGSGLEKLVATSSVEDAG----VLSPDASKVAWVSTANGYTTNVWVMDLK 163

Query: 380 GSQERLLVEDSNLQA----------PTWSPSGRSLIFSRKKD 411
             ++R L     ++           P+WSP G  + FS  ++
Sbjct: 164 TGEQRNLTNLEGVKGDPTKPNGYFRPSWSPDGEWIAFSSDRN 205



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 65/292 (22%), Positives = 109/292 (37%), Gaps = 86/292 (29%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           S+ V+  DG + R +       L  PR+SP+  ++ +     E+    +         P+
Sbjct: 224 SVYVIRPDGTDFRKIASREGWSLGSPRWSPDGSRIIFYEITTENTWDAH--------RPE 275

Query: 252 RIGNFRSMILAPRFSS--------NGKRALISVQKDEAMDI-YSVDLQSN-----ATERL 297
            + +  S I++  F++        NG    +S Q   A +I Y +   S+       E  
Sbjct: 276 SVASATSQIVSVDFATGLDRIQHTNGTGVKVSPQYVTADNIGYLIKGGSSEGIHYTAESS 335

Query: 298 TNTLFINI--SASYSPDSSQIVFESD----REGKEQLY---------------------- 329
           T T+      S S+SPD   +V+E      R  +++LY                      
Sbjct: 336 TGTVINGTMRSPSWSPDGKSVVYEKSEFEARPMEKKLYSWDPEWEYRFTDVFPDLSQQGR 395

Query: 330 --------------VMQSNGSDQ---------KRISQDKE----ASYFDPVWSPQGDLIA 362
                          M+ +G DQ           IS  +     A  F P WSP G+ IA
Sbjct: 396 LAITQKQLGNSSIVTMRPDGLDQTLVFDPLTQSNISSSEVGQGLAGAFQPSWSPDGEWIA 455

Query: 363 F-------TKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIF 406
           F       ++ +G+ + I   K DGS   +L   + N   P++S  GR L++
Sbjct: 456 FGIGAWFQSRATGKGY-IARAKADGSYHEILTNGTINAGFPSYSLDGRYLVY 506


>gi|116626608|ref|YP_828764.1| WD40 domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229770|gb|ABJ88479.1| WD40 domain protein beta Propeller [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 638

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 93/199 (46%), Gaps = 26/199 (13%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F+SR L V +   +G     L +++ DG  +  LT       F P FSP+ ++  Y T+ 
Sbjct: 442 FHSRFLKVGDRAETGA---RLAIVNADGTGLTELTAEPGNNAF-PSFSPDGKRFVYRTFT 497

Query: 233 DEDI-LRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           ++   LR+  ++T+  +   R   NF      P +S  G     S Q + A +IY++   
Sbjct: 498 EDGYGLRIMNLETKTGKILTRQYDNF------PLWSPRGDLITFSRQIEGAYEIYTIKPD 551

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKE-------------QLYVMQSNGSD 337
            ++ +RLT T   +   ++SPD   IVF S R G +             +++VM+ +G+ 
Sbjct: 552 GSSLKRLTFTKGNDAHMAWSPDGEYIVFTSSRMGFKDEVAYTDAPQPYGEIFVMRYDGTG 611

Query: 338 QKRISQDKEASYFDPVWSP 356
            ++++ D +     P W P
Sbjct: 612 VEQLT-DNQWEEGTPAWQP 629



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 8/129 (6%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V+        LT     N   S+SPD  + V+ +  E    L +M       K +++   
Sbjct: 462 VNADGTGLTELTAEPGNNAFPSFSPDGKRFVYRTFTEDGYGLRIMNLETKTGKILTRQ-- 519

Query: 347 ASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRS 403
              +D  P+WSP+GDLI F++     + I  +K DGS  +RL     N     WSP G  
Sbjct: 520 ---YDNFPLWSPRGDLITFSRQIEGAYEIYTIKPDGSSLKRLTFTKGNDAHMAWSPDGEY 576

Query: 404 LIFSRKKDG 412
           ++F+  + G
Sbjct: 577 IVFTSSRMG 585



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 12/133 (9%)

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           + G+  L+V  S+GSD+  +    +  Y DP W+P G  I FT        +  +  DGS
Sbjct: 59  QPGQLGLFVAASDGSDEHPLLASADTDY-DPAWAPDGGSIVFTSERNGSADLFRVNPDGS 117

Query: 382 QERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPA--- 435
             + L  D     QA T+S   + L F   + G T + L+++DL  GR   L + P    
Sbjct: 118 GLKQLTADPAYDDQA-TFSSDSKQLAFVSTRGGGT-ANLWTMDLVTGRARALTSGPGGDF 175

Query: 436 ---YASDPQWVGF 445
              ++ D +W+ F
Sbjct: 176 RPSWSPDGKWIAF 188



 Score = 40.8 bits (94), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 17/152 (11%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKF 366
           +++PD   IVF S+R G   L+ +  +GS  K+++ D   +Y D   +S     +AF   
Sbjct: 89  AWAPDGGSIVFTSERNGSADLFRVNPDGSGLKQLTADP--AYDDQATFSSDSKQLAFVST 146

Query: 367 SGEKFA-IGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTG--------- 415
            G   A +  M     + R L         P+WSP G+ + FS  +D             
Sbjct: 147 RGGGTANLWTMDLVTGRARALTSGPGGDFRPSWSPDGKWIAFSSGRDNPVPFASGRWERL 206

Query: 416 --SKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
             S +Y I  +G   + +  +  +   P+W+G
Sbjct: 207 QLSDIYVIRPDGSGLKKITKSGNFCGSPKWMG 238



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 75/182 (41%), Gaps = 35/182 (19%)

Query: 265 FSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FSS+ K+ A +S +     +++++DL +     LT+    +   S+SPD   I F S R+
Sbjct: 134 FSSDSKQLAFVSTRGGGTANLWTMDLVTGRARALTSGPGGDFRPSWSPDGKWIAFSSGRD 193

Query: 324 GK-------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTKFS 367
                            +YV++ +GS  K+I++        P W   GD   +IA+   +
Sbjct: 194 NPVPFASGRWERLQLSDIYVIRPDGSGLKKITKSGNFC-GSPKW--MGDSSHVIAYCMTA 250

Query: 368 GEKFAIGVMKKD-GSQERLLVEDSNLQA-------------PTWSPSGRSLIFSRKKDGD 413
            +  A      D G+  RL+  D+   A             P+W P G    + RK   D
Sbjct: 251 EQTLANRRASPDPGNDTRLVSIDTGTAASTELNTGPGVKINPSWLP-GNETGYIRKDTAD 309

Query: 414 TG 415
            G
Sbjct: 310 PG 311


>gi|160873141|ref|YP_001552457.1| amidohydrolase [Shewanella baltica OS195]
 gi|160858663|gb|ABX47197.1| amidohydrolase [Shewanella baltica OS195]
 gi|315265366|gb|ADT92219.1| amidohydrolase [Shewanella baltica OS678]
          Length = 1062

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 15/138 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +     + L   +   +   YSPD   I F SD +G + +++M ++GS+ + ++
Sbjct: 73  DIYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGDGGDNIWIMNADGSNPRTVT 132

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMKKDGSQERLLVEDSN--- 391
           Q+       P WSP    L+A   F+       GE +   V   +G +   L E  N   
Sbjct: 133 QETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHVAGGEGVK---LTERPNDQK 189

Query: 392 -LQAPTWSPSGRSLIFSR 408
            L  P +SP GR + FS+
Sbjct: 190 DLGEPAYSPDGRYIYFSQ 207



 Score = 39.7 bits (91), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 12/141 (8%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  SPD S++ FE+   GK  L  +  +G   +    +       P WS  G  I FT +
Sbjct: 369 AQVSPDGSKVAFEA--LGKIWLKSL-PDGKMSRLTELNNGIEELYPQWSRDGKNIVFTTW 425

Query: 367 SGE-KFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK------- 417
           + + +  + V+  K G  ++L  E      PT+SP G  +++ + + G+   +       
Sbjct: 426 NDQDQGTVQVISAKGGKPKQLTSEPGKYVEPTFSPDGELVVYRKTQGGNLTPRTWSQEPG 485

Query: 418 LYSIDLNGRNETLINTPAYAS 438
           LY +D+ G+    I+   Y +
Sbjct: 486 LYKVDIKGKQNMKISADGYQA 506


>gi|57168719|ref|ZP_00367851.1| colicin tolerance-like protein (tolB) [Campylobacter coli RM2228]
 gi|57020000|gb|EAL56680.1| colicin tolerance-like protein (tolB) [Campylobacter coli RM2228]
          Length = 345

 Score = 59.7 bits (143), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 10/195 (5%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P++   +Q + Y T  D D   +Y  D R ++A K + +   M++A   S +G + L+++
Sbjct: 121 PKWGNKEQSIFYYTAYDHDRPTLYRYDLRTNKASKILAS-GGMVVASDVSLDGSKLLVTM 179

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQ-SN 334
              +  D+Y  DL S    +LTN   I+++ ++   D S+ VF SDR G   +++   +N
Sbjct: 180 APKDQPDVYLYDLNSKNLTQLTNYSGIDVNGNFIGVDDSKFVFVSDRLGYPNIFIQNLNN 239

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDSN 391
           GS ++ +   K  S      S   D + ++     +   F I +M  + +  R    +  
Sbjct: 240 GSAEQAVFHGKNNS----AVSTYKDFLVYSSREPNQVGVFNIYLMSINSTGIRQFTANGK 295

Query: 392 LQAPTWSPSGRSLIF 406
              P +S  G S++F
Sbjct: 296 NLFPRFSSDGGSIVF 310


>gi|16124371|ref|NP_418935.1| hypothetical protein CC_0116 [Caulobacter crescentus CB15]
 gi|13421223|gb|AAK22103.1| hypothetical protein CC_0116 [Caulobacter crescentus CB15]
          Length = 1096

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 17/140 (12%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +      R+   L  +    +SPD  +I F SDR G + ++VM  +G D+++++
Sbjct: 74  DIYTMPITGGTPTRIAEGLAYDQQPRFSPDGKRIAFTSDRGGGDNIWVMNLDGGDKRQVT 133

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQ------ERLLVE 388
           +++      P WSP G  I   K         +GE +   V    G Q      E+L  E
Sbjct: 134 KEEFRLLNQPSWSPDGRFIVAKKHFTTGRSLGTGEVWVYHVSGGGGVQLVKRASEQLQKE 193

Query: 389 DSNLQAPTWSPSGRSLIFSR 408
              L  P ++  G+S+ ++R
Sbjct: 194 ---LGEPIYAADGKSVFYTR 210



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 17/124 (13%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTK 365
           AS SPD   +VFE+      +L++  + G + +R +S D++A    P WS  G  I F  
Sbjct: 372 ASVSPDGKSVVFET----LGKLWIKSTAGGEARRLVSGDEDAFELYPSWSRDGRTIVFVS 427

Query: 366 FSGEKF-------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           ++           A G + KD     ++ +  +  AP +SP G++++F R++ G   S  
Sbjct: 428 WTDAGLGRLRTVPAAGGVGKD-----VIAQPGHYGAPRFSPDGKTIVFERRRGGGLTSGR 482

Query: 419 YSID 422
           +S D
Sbjct: 483 WSQD 486



 Score = 43.5 bits (101), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 32/209 (15%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-AS 308
           P RI    +    PRFS +GKR   +  +    +I+ ++L      ++T   F  ++  S
Sbjct: 85  PTRIAEGLAYDQQPRFSPDGKRIAFTSDRGGGDNIWVMNLDGGDKRQVTKEEFRLLNQPS 144

Query: 309 YSPDSSQIV----FESDRE---GKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGD 359
           +SPD   IV    F + R    G+  +Y +   G  Q  KR S+  +    +P+++  G 
Sbjct: 145 WSPDGRFIVAKKHFTTGRSLGTGEVWVYHVSGGGGVQLVKRASEQLQKELGEPIYAADGK 204

Query: 360 LIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQA---------------PTWSPSGR 402
            + +T+    G  F      +D +     +E  +L+                PT SP G+
Sbjct: 205 SVFYTRNVTPGPIFE---YAQDSNTALFDIERYDLETGEVTTAVSGLGGSVRPTPSPDGK 261

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            + F R++   T SKLY  DL    E  I
Sbjct: 262 KIAFVRRE--RTKSKLYVKDLTSGEERKI 288


>gi|169785140|ref|XP_001827031.1| hypothetical protein AOR_1_786034 [Aspergillus oryzae RIB40]
 gi|83775778|dbj|BAE65898.1| unnamed protein product [Aspergillus oryzae]
          Length = 647

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 41/227 (18%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P +  ++   R  P+  ++  A  D  +  ++   ++R D                 FS 
Sbjct: 47  PGKKGVMLMNRIGPSSSELYVANIDGSNERKLLGNNSRFD-------------YHASFSP 93

Query: 268 NGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG- 324
           +G+    + ++  D   D+Y      +  E+L  T  +  +   SPD+S++ + S   G 
Sbjct: 94  DGQWITFTSERNGDGNSDLYRCRADGSGLEKLVATSSVEDAGVLSPDASKVAWVSTANGY 153

Query: 325 KEQLYVMQSNGSDQKRISQ--------DKEASYFDPVWSPQGDLIAF-----TKFSG--- 368
              ++VM     +Q+ ++          K   YF P WSP G+ IAF     T++ G   
Sbjct: 154 TTNVWVMDLKTGEQRNLTSLEGVKGDPTKPNGYFRPSWSPDGEWIAFSSDRNTEWRGHGN 213

Query: 369 -------EKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIF 406
                  ++ ++ V++ DG+  R +   E  +L +P WSP G  +IF
Sbjct: 214 GTGWEHTQELSVYVIRPDGTDFRKIASREGWSLGSPRWSPDGSRIIF 260



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 64/307 (20%), Positives = 117/307 (38%), Gaps = 86/307 (28%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY----DDEDILRVYLM 242
           G   + L V + DG+N R L  +  +  +   FSP+ Q + + +      + D+ R    
Sbjct: 59  GPSSSELYVANIDGSNERKLLGNNSRFDYHASFSPDGQWITFTSERNGDGNSDLYRCRAD 118

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            + +++         + +L+P  S   K A +S       +++ +DL++     LT+   
Sbjct: 119 GSGLEKLVATSSVEDAGVLSPDAS---KVAWVSTANGYTTNVWVMDLKTGEQRNLTSLEG 175

Query: 303 IN---------ISASYSPDSSQIVFESDRE----------GKEQ-----LYVMQSNGSDQ 338
           +             S+SPD   I F SDR           G E      +YV++ +G+D 
Sbjct: 176 VKGDPTKPNGYFRPSWSPDGEWIAFSSDRNTEWRGHGNGTGWEHTQELSVYVIRPDGTDF 235

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---------------------FA----- 372
           ++I+  +  S   P WSP G  I F + + E                      FA     
Sbjct: 236 RKIASREGWSLGSPRWSPDGSRIIFYEITTENTWDAHRPESVASATSQIVSVDFATGLDR 295

Query: 373 --------------------IGVMKKDGSQERL---------LVEDSNLQAPTWSPSGRS 403
                               IG + K GS E +          V +  +++P+WSP G+S
Sbjct: 296 IQHTNGTGVKVSPQYVTADNIGYLIKGGSSEGIHYTAESSTGTVINGTMRSPSWSPDGKS 355

Query: 404 LIFSRKK 410
           +++ + +
Sbjct: 356 VVYEKSE 362



 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 66/292 (22%), Positives = 110/292 (37%), Gaps = 86/292 (29%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           S+ V+  DG + R +       L  PR+SP+  ++ +     E+    +         P+
Sbjct: 224 SVYVIRPDGTDFRKIASREGWSLGSPRWSPDGSRIIFYEITTENTWDAH--------RPE 275

Query: 252 RIGNFRSMILAPRFSS--------NGKRALISVQKDEAMDI-YSVDLQSN-----ATERL 297
            + +  S I++  F++        NG    +S Q   A +I Y +   S+       E  
Sbjct: 276 SVASATSQIVSVDFATGLDRIQHTNGTGVKVSPQYVTADNIGYLIKGGSSEGIHYTAESS 335

Query: 298 TNTLFINI--SASYSPDSSQIVFESD----REGKEQLY---------------------- 329
           T T+      S S+SPD   +V+E      R  +++LY                      
Sbjct: 336 TGTVINGTMRSPSWSPDGKSVVYEKSEFEARPMEKKLYSWDPEWEYRFTDVFPDLSQQGR 395

Query: 330 --------------VMQSNGSDQK---------RISQDKE----ASYFDPVWSPQGDLIA 362
                          M+ +G DQK          IS  +     A  F P WSP G+ IA
Sbjct: 396 LAITQKQLGNSSIVTMRPDGLDQKLVFDPLTQSNISSSEVGQGLAGAFQPSWSPDGEWIA 455

Query: 363 F-------TKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIF 406
           F       ++ +G+ + I   K DGS   +L   + N   P++S  GR L++
Sbjct: 456 FGIGAWFQSRATGKGY-IARAKADGSYHEILTNGTINAGFPSYSLDGRYLVY 506



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 23/162 (14%)

Query: 269 GKRALISVQK--DEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDR--E 323
           GK+ ++ + +    + ++Y  ++  SN  + L N    +  AS+SPD   I F S+R  +
Sbjct: 48  GKKGVMLMNRIGPSSSELYVANIDGSNERKLLGNNSRFDYHASFSPDGQWITFTSERNGD 107

Query: 324 GKEQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKD 379
           G   LY  +++GS  +++   S  ++A     V SP    +A+ +  +G    + VM   
Sbjct: 108 GNSDLYRCRADGSGLEKLVATSSVEDAG----VLSPDASKVAWVSTANGYTTNVWVMDLK 163

Query: 380 GSQERLLVEDSNLQA----------PTWSPSGRSLIFSRKKD 411
             ++R L     ++           P+WSP G  + FS  ++
Sbjct: 164 TGEQRNLTSLEGVKGDPTKPNGYFRPSWSPDGEWIAFSSDRN 205


>gi|152998566|ref|YP_001364247.1| amidohydrolase [Shewanella baltica OS185]
 gi|151363184|gb|ABS06184.1| amidohydrolase [Shewanella baltica OS185]
          Length = 1062

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 15/138 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +     + L   +   +   YSPD   I F SD +G + +++M ++GS+ + ++
Sbjct: 73  DIYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGDGGDNIWIMDADGSNPRTVT 132

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMKKDGSQERLLVEDSN--- 391
           Q+       P WSP    L+A   F+       GE +   V   +G +   L E  N   
Sbjct: 133 QETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHVAGGEGVK---LTERPNDQK 189

Query: 392 -LQAPTWSPSGRSLIFSR 408
            L  P +SP GR + FS+
Sbjct: 190 DLGEPAYSPDGRYIYFSQ 207



 Score = 40.0 bits (92), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 15/107 (14%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSL 404
           E ++ +   SP G  I F    G+ + I V    G + + L +    Q  P +SP G+ +
Sbjct: 51  EGTWMNLSVSPDGKHIVF-DLLGDIYQIPVT---GGEAKPLAQGIAWQMQPVYSPDGKHI 106

Query: 405 IFSRKKDGDTGSKLYSIDLNGRN------ET--LINTPAYASDPQWV 443
            F+   DGD G  ++ +D +G N      ET  L+N+PA++ D Q++
Sbjct: 107 AFT--SDGDGGDNIWIMDADGSNPRTVTQETFRLLNSPAWSPDSQYL 151



 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 12/141 (8%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  SPD S++ FE+   GK  L  +  +G   +    +       P WS  G  I FT +
Sbjct: 369 AQVSPDGSKVAFEA--LGKIWLKSL-PDGKMSRLTELNNGIEELYPQWSRDGKNIVFTTW 425

Query: 367 SGE-KFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK------- 417
           + + +  + V+  K G  ++L  E      PT+SP G  +++ +   G+   +       
Sbjct: 426 NDQDQGTVQVISAKGGKPKQLTSEPGKYVEPTFSPDGELVVYRKTHGGNLTPRTWSQEPG 485

Query: 418 LYSIDLNGRNETLINTPAYAS 438
           LY +D+ G+    I+   Y +
Sbjct: 486 LYKVDIKGKQNKKISADGYQA 506


>gi|86158652|ref|YP_465437.1| hypothetical protein Adeh_2230 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775163|gb|ABC82000.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 1042

 Score = 59.7 bits (143), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 107/240 (44%), Gaps = 43/240 (17%)

Query: 191 NSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           N L +MD  GA  R LT  P   Q   +P +S +  ++AYA+ D      +Y++D     
Sbjct: 341 NRLWLMDVGGAP-RPLTDGPYYAQ---DPAWSRDGTRIAYAS-DKAGTADLYVLDVATG- 394

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +R+ +     +AP +S +G R      +D+A   + +DL S A  ++   LF     +
Sbjct: 395 AEQRVTSLPGAEVAPAWSPDGGRLAF---QDQAGATHVLDLASGAVRQIVAPLFAPGRPT 451

Query: 309 YSPDSSQIVFESD-------REGKEQLYVMQSNGSDQKRISQDKEASYFD---------P 352
           +S D   +   +        REG  Q+  +      +   ++ +EA+ F+         P
Sbjct: 452 WSADGRTVALAALKPYTRRFREGTSQILTVDV----ESGATRYQEAAPFESLSTRGDDGP 507

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKD------GSQERLLVEDSNLQAPTWSPSGRSLIF 406
           VWSP G  +AF   S     + VM  D      GS  R+  E ++  APTWS   R L++
Sbjct: 508 VWSPDGTALAFVMQS----TLWVMPVDAAGRAAGSPVRITSEPTD--APTWSGDSRRLLY 561



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 17/171 (9%)

Query: 278 KDEAMDI----YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +D  MD+    +S+        RLT+ L       +SP   ++ F++   G   ++ M+ 
Sbjct: 55  RDLVMDLQGVLWSLPRGGGEARRLTDGLLEPARPDFSPRGDRVAFQAYAGGTFHIWTMRP 114

Query: 334 NGSDQKRISQ----DKEASYFDPVWSPQGDLIAFT---KFSGEKFAIGVMKKDGSQERLL 386
           +G+D ++++     D+E     P +SP G  IAF+    F G      V    G+  R  
Sbjct: 115 DGTDVRQLTSGHGDDRE-----PRFSPDGTRIAFSSDRAFEGSYDVWVVDVASGALTRWT 169

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              ++   P W+P G  + F     G TG+ + ++D  G   TL   PA A
Sbjct: 170 EAPADEFEPAWTPDGGEIAFVSGA-GSTGTAIEAVDSTGARRTLATAPAGA 219



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 10/152 (6%)

Query: 260 ILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           I+AP  S +G R +  ++ +   MD+        A   LT+  +     ++S D ++I +
Sbjct: 323 IVAPALSPDGTRVVFQALNRLWLMDV------GGAPRPLTDGPYYAQDPAWSRDGTRIAY 376

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD+ G   LYV+      ++R++    A    P WSP G  +AF   +G    + +   
Sbjct: 377 ASDKAGTADLYVLDVATGAEQRVTSLPGAE-VAPAWSPDGGRLAFQDQAGATHVLDLAS- 434

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            G+  +++        PTWS  GR++  +  K
Sbjct: 435 -GAVRQIVAPLFAPGRPTWSADGRTVALAALK 465



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 6/149 (4%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS  G R            I+++        +LT+    +    +SPD ++I F SDR
Sbjct: 88  PDFSPRGDRVAFQAYAGGTFHIWTMRPDGTDVRQLTSGHGDDREPRFSPDGTRIAFSSDR 147

Query: 323 --EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKD 379
             EG   ++V+        R ++   A  F+P W+P G  IAF   +G    AI  +   
Sbjct: 148 AFEGSYDVWVVDVASGALTRWTE-APADEFEPAWTPDGGEIAFVSGAGSTGTAIEAVDST 206

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIF 406
           G++  L    +   L +P+ SP G  L +
Sbjct: 207 GARRTLATAPAGARLNSPSISPDGAHLAW 235



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 31/210 (14%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  P  SP+  +V +     + + R++LMD  +  AP+ + +       P +S +G R  
Sbjct: 323 IVAPALSPDGTRVVF-----QALNRLWLMD--VGGAPRPLTDGPYYAQDPAWSRDGTRIA 375

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +  K    D+Y +D+ + A +R+T+     ++ ++SPD  ++ F+ D+ G   +  + S
Sbjct: 376 YASDKAGTADLYVLDVATGAEQRVTSLPGAEVAPAWSPDGGRLAFQ-DQAGATHVLDLAS 434

Query: 334 NGSDQKRISQDKEASYFD---PVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGS- 381
               Q        A  F    P WS  G  +A             G    + V  + G+ 
Sbjct: 435 GAVRQ------IVAPLFAPGRPTWSADGRTVALAALKPYTRRFREGTSQILTVDVESGAT 488

Query: 382 --QERLLVEDSNLQ---APTWSPSGRSLIF 406
             QE    E  + +    P WSP G +L F
Sbjct: 489 RYQEAAPFESLSTRGDDGPVWSPDGTALAF 518



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 7/142 (4%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N++ + SPD   +V   D +G   L+ +   G + +R++ D       P +SP+GD +AF
Sbjct: 45  NVAVTASPDGRDLVM--DLQGV--LWSLPRGGGEARRLT-DGLLEPARPDFSPRGDRVAF 99

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             ++G  F I  M+ DG+  R L     + + P +SP G  + FS  +  +    ++ +D
Sbjct: 100 QAYAGGTFHIWTMRPDGTDVRQLTSGHGDDREPRFSPDGTRIAFSSDRAFEGSYDVWVVD 159

Query: 423 L-NGRNETLINTPAYASDPQWV 443
           + +G        PA   +P W 
Sbjct: 160 VASGALTRWTEAPADEFEPAWT 181


>gi|77360114|ref|YP_339689.1| hypothetical protein PSHAa1171 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76875025|emb|CAI86246.1| conserved protein of unknown function [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 1060

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 9/135 (6%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +      +LT+ +   +   +SP+   I F SD+ G + +++M  NG +Q  ++
Sbjct: 70  DIYTMPISGGNATQLTSDIAWQMQPRFSPNGKHIAFTSDQGGGDNIWIMDLNGENQSAVT 129

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMKKDGSQERLLVEDS-NLQ 393
            +       P WSP GD L+A   F+       GE +        G Q     +D  +L 
Sbjct: 130 DETFRLLNSPAWSPDGDYLVARKHFTASRSLGAGEVWLYHKAGGKGVQLTKRADDQKDLG 189

Query: 394 APTWSPSGRSLIFSR 408
            P +SP GR + FS 
Sbjct: 190 EPMFSPDGRYVYFSH 204



 Score = 43.9 bits (102), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 22/183 (12%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIV-- 317
           + PRFS NGK    +  +    +I+ +DL       +T+  F  + S ++SPD   +V  
Sbjct: 92  MQPRFSPNGKHIAFTSDQGGGDNIWIMDLNGENQSAVTDETFRLLNSPAWSPDGDYLVAR 151

Query: 318 --FESDRE-GKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFS--GEK 370
             F + R  G  ++++    G    ++++  D +    +P++SP G  + F+  +  G+ 
Sbjct: 152 KHFTASRSLGAGEVWLYHKAGGKGVQLTKRADDQKDLGEPMFSPDGRYVYFSHDATPGKT 211

Query: 371 F------AIGVMK------KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           F        G+ K      + G  E ++        PT SP G+ L + ++ D  T   L
Sbjct: 212 FHYSKDSVAGIYKIKRYDRETGEIETVISGMGGAIRPTPSPDGKKLAYIKRDDFQTSLYL 271

Query: 419 YSI 421
           Y +
Sbjct: 272 YDL 274



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 9/113 (7%)

Query: 259 MILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLT-NTLFINISASYSPDSSQI 316
           M+   + S +G+ A+      EA+  IY  DL+S   +RLT  T    + A YS D  +I
Sbjct: 362 MLRNVQISPDGETAIF-----EALGHIYKRDLESGKIKRLTKQTDHYELFAQYSRDGKKI 416

Query: 317 VFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           V+ + D   + Q+ V+ ++      I++ +   Y +P +SP G  + + K +G
Sbjct: 417 VYTTWDDNEQGQVRVVSASSGRGDTITE-QPGKYVEPTFSPDGKTVVYRKATG 468


>gi|332142931|ref|YP_004428669.1| amidohydrolase [Alteromonas macleodii str. 'Deep ecotype']
 gi|332143024|ref|YP_004428762.1| amidohydrolase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552953|gb|AEA99671.1| amidohydrolase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327553046|gb|AEA99764.1| amidohydrolase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 1111

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 45/83 (54%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y V++       LT     NI  S SPD   I F SD++G   ++VM  +GS+ ++++
Sbjct: 82  DLYKVNMNGGDATPLTQDFAWNIHPSISPDGKHIAFISDKDGLSNVWVMDIDGSNLRQVT 141

Query: 343 QDKEASYFDPVWSPQGDLIAFTK 365
           ++K      P WSP G+ +  TK
Sbjct: 142 KEKSNLIHSPKWSPDGEYLVVTK 164



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 14/149 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V D     I+ LT   D   + PRFS + +K+ Y T+DD+D+  V ++  R  +  K 
Sbjct: 398 LYVRDVKSGKIKRLTKQNDHDEYYPRFSNDGKKIVYTTWDDQDLGTVRVVSARGGKG-KV 456

Query: 253 IGNFRSMILAPRFSSNGKRA---------LISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           I       + P FS++G++          L+         IY  DL+ ++  ++T+  + 
Sbjct: 457 ITQQPGHYIEPSFSADGEKVVFRKFTGGFLLDPTYSVEPGIYVADLEEDSVSKVTDNGY- 515

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +A ++    ++ F ++  G E  Y  Q
Sbjct: 516 --NAHFAGGDDRVYF-TESAGGEAYYETQ 541


>gi|217971231|ref|YP_002355982.1| amidohydrolase [Shewanella baltica OS223]
 gi|217496366|gb|ACK44559.1| amidohydrolase [Shewanella baltica OS223]
          Length = 1062

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 15/138 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +     + L   +   +   YSPD   I F SD +G + +++M ++GS+ + ++
Sbjct: 73  DIYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGDGGDNIWIMDADGSNPRTVT 132

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMKKDGSQERLLVEDSN--- 391
           Q+       P WSP    L+A   F+       GE +   V   +G +   L E  N   
Sbjct: 133 QETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHVAGGEGVK---LTERPNDQK 189

Query: 392 -LQAPTWSPSGRSLIFSR 408
            L  P +SP GR + FS+
Sbjct: 190 DLGEPAYSPDGRYIYFSQ 207



 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 12/141 (8%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  SPD S++ FE+   GK  L  +  +G   +    +       P WS  G  I FT +
Sbjct: 369 AQVSPDGSKVAFEA--LGKIWLKSL-PDGKMSRLTELNNGIEELYPQWSRDGKNIVFTTW 425

Query: 367 SGE-KFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK------- 417
           + + +  + V+  K G  ++L  E    + PT+SP G  +++ + + G+   +       
Sbjct: 426 NDQDQGTVQVISAKGGKPKQLTSEPGKYEEPTFSPDGELVVYRKTQGGNLTPRTWSQEPG 485

Query: 418 LYSIDLNGRNETLINTPAYAS 438
           LY +D+ G+    I+   Y +
Sbjct: 486 LYKVDIKGKQNKKISADGYQA 506



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 15/107 (14%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSL 404
           E ++ +   SP G  I F    G+ + I V    G + + L +    Q  P +SP G+ +
Sbjct: 51  EGTWMNLSVSPDGKNIVF-DLLGDIYQIPVT---GGEAKPLAQGIAWQMQPVYSPDGKHI 106

Query: 405 IFSRKKDGDTGSKLYSIDLNGRN------ET--LINTPAYASDPQWV 443
            F+   DGD G  ++ +D +G N      ET  L+N+PA++ D Q++
Sbjct: 107 AFT--SDGDGGDNIWIMDADGSNPRTVTQETFRLLNSPAWSPDSQYL 151


>gi|255013144|ref|ZP_05285270.1| periplasmic component of the Tol biopolymer transport system
           [Bacteroides sp. 2_1_7]
          Length = 260

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 82/180 (45%), Gaps = 9/180 (5%)

Query: 266 SSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           S++GK+  IS   ++D    IY++  +     RL   L  +    +SPD  Q+ + ++R 
Sbjct: 54  SADGKQIAISNGTKEDGRSRIYTLPFEG-GVPRLITPLGPSYLHGWSPDGKQLAYCAERN 112

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G   +YV+ + G ++KR++   E     P +SP G  I F         +  MK DGS++
Sbjct: 113 GNFDVYVIPALGGEEKRLTT-AEGLDDGPEYSPCGQYIWFNSVRTGLMQVWRMKADGSEQ 171

Query: 384 RLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             +   E  N   P  SP G+ ++F     GD     +   L  +N  L   PA   +P+
Sbjct: 172 TQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEPGQH---LANKNVELRLMPAEGGEPK 228



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 15/157 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GK+     +++   D+Y +       +RLT    ++    YSP    I F S R G
Sbjct: 98  WSPDGKQLAYCAERNGNFDVYVIPALGGEEKRLTTAEGLDDGPEYSPCGQYIWFNSVRTG 157

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFA-----I 373
             Q++ M+++GS+Q +++ D+  + + P  SP G  I F  ++      G+  A     +
Sbjct: 158 LMQVWRMKADGSEQTQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEPGQHLANKNVEL 217

Query: 374 GVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIF 406
            +M  +G + + LV+       +   +W+P  +   F
Sbjct: 218 RLMPAEGGEPKTLVKLFGGQGTINVNSWAPDSKRFAF 254


>gi|126172273|ref|YP_001048422.1| WD40 domain-containing protein [Shewanella baltica OS155]
 gi|125995478|gb|ABN59553.1| WD40 domain protein beta Propeller [Shewanella baltica OS155]
          Length = 445

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 15/138 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +     + L   +   +   YSPD   I F SD +G + +++M ++GS+ + ++
Sbjct: 73  DIYQIPVSGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGDGGDNIWIMDADGSNPRTVT 132

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMKKDGSQERLLVEDSN--- 391
           Q+       P WSP    L+A   F+       GE +   V   +G +   L E  N   
Sbjct: 133 QETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHVAGGEGVK---LTERPNDQK 189

Query: 392 -LQAPTWSPSGRSLIFSR 408
            L  P +SP GR + FS+
Sbjct: 190 DLGEPAYSPDGRYIYFSQ 207



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 15/107 (14%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSL 404
           E ++ +   SP G  I F    G+ + I V    G + + L +    Q  P +SP G+ +
Sbjct: 51  EGTWMNLSVSPDGKHIVF-DLLGDIYQIPV---SGGEAKPLAQGIAWQMQPVYSPDGKHI 106

Query: 405 IFSRKKDGDTGSKLYSIDLNGRN------ET--LINTPAYASDPQWV 443
            F+   DGD G  ++ +D +G N      ET  L+N+PA++ D Q++
Sbjct: 107 AFT--SDGDGGDNIWIMDADGSNPRTVTQETFRLLNSPAWSPDSQYL 151


>gi|221632297|ref|YP_002521518.1| acyl-peptide hydrolase [Thermomicrobium roseum DSM 5159]
 gi|221156948|gb|ACM06075.1| acylamino-acid-releasing enzyme (ec) (acyl-peptide hydrolase) (aph)
           [Thermomicrobium roseum DSM 5159]
          Length = 657

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 121/270 (44%), Gaps = 57/270 (21%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEP----RFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           + L V+ R+G   R LT        EP     +SP+ Q++A  T       R    + ++
Sbjct: 88  DQLWVIPRNGGEARQLT-----NFVEPVTGFAWSPDGQRIAVVT-------RAQQAEGKV 135

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D     +   R      R+  +G+R  +  ++     I+ VDL++   ER T+  + +  
Sbjct: 136 DPETDVVRLTRL-----RYRFDGQRGFLHERRSH---IWVVDLRTGTLERATDGDWDDDW 187

Query: 307 ASYSPDSSQIVFESDR-EGKE-----QLYVMQSNGS----DQKRISQDKEASYFDPVWSP 356
            ++SPD SQ+VF S+R E +E     +L++++ + +    D   ++    A++  P WSP
Sbjct: 188 PAWSPDGSQLVFTSNRTEEREWNAASELWLLRFDAAGRTVDLSCVTGGPSAAFGRPSWSP 247

Query: 357 QGDLIA----FTKFSGEKFA--IGVMKKDGSQERLL-------VEDSNLQ---APT---- 396
            G LIA    F  ++G      + VM  DG++   L       +EDS L     P+    
Sbjct: 248 DGRLIAAVGHFESWAGSARHKRLWVMTPDGNERWNLSADFDATLEDSLLTDAFGPSKPGL 307

Query: 397 -WSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            WSP GR +     + G    +LY   ++G
Sbjct: 308 LWSPDGRWIFTQVSEQGAV--RLYRFPVSG 335



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/187 (20%), Positives = 76/187 (40%), Gaps = 45/187 (24%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           I+      +   R T+    +    +SP   ++ F SDR G +QL+V+  NG + ++++ 
Sbjct: 46  IWLARTDGSPPRRFTSGTHRDTMPRWSPSGEELAFLSDRTGSDQLWVIPRNGGEARQLT- 104

Query: 344 DKEASYFDPV----WSPQGDLIAFT------------------------KFSGEKFAIGV 375
               ++ +PV    WSP G  IA                          +F G++  +  
Sbjct: 105 ----NFVEPVTGFAWSPDGQRIAVVTRAQQAEGKVDPETDVVRLTRLRYRFDGQRGFLHE 160

Query: 376 MK--------KDGSQERLLVEDSNLQAPTWSPSGRSLIF----SRKKDGDTGSKLYSIDL 423
            +        + G+ ER    D +   P WSP G  L+F    + +++ +  S+L+ +  
Sbjct: 161 RRSHIWVVDLRTGTLERATDGDWDDDWPAWSPDGSQLVFTSNRTEEREWNAASELWLLRF 220

Query: 424 NGRNETL 430
           +    T+
Sbjct: 221 DAAGRTV 227


>gi|149182429|ref|ZP_01860905.1| YuxL [Bacillus sp. SG-1]
 gi|148849892|gb|EDL64066.1| YuxL [Bacillus sp. SG-1]
          Length = 651

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 87/195 (44%), Gaps = 47/195 (24%)

Query: 263 PRFSSNGKRA-LISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P+ S NG+ A  +  + DE  +     +Y +D+++  + + T     N S  +SPD  ++
Sbjct: 15  PKISPNGEEAAYVITEMDEETNKYISNLYHLDIKTGKSTQWTFGKNRNTSPRWSPDGGKV 74

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----------- 365
           VF SDR  K QL+++  +G + ++++     +   PVWSP G  +AF+            
Sbjct: 75  VFVSDRSDKSQLFLLLRSGGEARQLTFCPNGAS-QPVWSPCGKKVAFSTALMEGETLTEG 133

Query: 366 ------------------------FSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWS 398
                                   F+G++  I V+  +    +L+ E   D +LQ  +WS
Sbjct: 134 KEEDKHPQPLEVTTMKYKSDDSGFFNGKRNHIAVIDVETLDMKLITEGEIDYSLQ--SWS 191

Query: 399 PSGRSLIFSRKKDGD 413
           P+GR + +   K  D
Sbjct: 192 PNGRYIAYGADKSAD 206


>gi|21228491|ref|NP_634413.1| hypothetical protein MM_2389 [Methanosarcina mazei Go1]
 gi|20906975|gb|AAM32085.1| conserved protein [Methanosarcina mazei Go1]
          Length = 771

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 102/207 (49%), Gaps = 27/207 (13%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDD 233
           SRI ++S S  +G   + L  ++ DG+N + +    +  +    ++P+   +A+ A Y +
Sbjct: 33  SRIAYIS-SDHNG--SDRLVTLNPDGSNEQIVASFAE--ISALAWAPDSSGMAFNAAYSE 87

Query: 234 EDILRVYLMDTRIDRAP--------KRIGNFRSMILAPRFSSNGKRALIS--------VQ 277
           +    +YL D               ++I +++S + +P    +G R L S          
Sbjct: 88  DGQTGIYLADLESSEPVFLVRGEIRQQIQSWQSEVWSP----DGSRILYSSNENGNSDTN 143

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           ++   DIYSV+   +   +LT+    + S  +SPD S+I+F SDR G   +++M SNG  
Sbjct: 144 ENGNSDIYSVNTDGSEKIQLTDDNSKDYSPCFSPDGSKIIFISDRTGHSSIWIMSSNGDK 203

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFT 364
           ++ +++  E  + D  W+P G  IAF+
Sbjct: 204 EEELTEGFEGIH-DFSWNPNGQKIAFS 229



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 17/134 (12%)

Query: 307 ASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            ++SPD S+I +  SD  G ++L  +  +GS+++ ++   E S     W+P    +AF  
Sbjct: 26  CAWSPDGSRIAYISSDHNGSDRLVTLNPDGSNEQIVASFAEISAL--AWAPDSSGMAFNA 83

Query: 366 FSGEKFAIGVMKKD--GSQERLLVEDS------NLQAPTWSPSGRSLIFSRKKDGDT--- 414
              E    G+   D   S+   LV         + Q+  WSP G  +++S  ++G++   
Sbjct: 84  AYSEDGQTGIYLADLESSEPVFLVRGEIRQQIQSWQSEVWSPDGSRILYSSNENGNSDTN 143

Query: 415 ---GSKLYSIDLNG 425
               S +YS++ +G
Sbjct: 144 ENGNSDIYSVNTDG 157



 Score = 37.0 bits (84), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 11/101 (10%)

Query: 331 MQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAF--TKFSGEKFAIGVMKKDGSQER 384
           M S+GSD   + +      F  +    WSP G  IA+  +  +G    +  +  DGS E+
Sbjct: 1   MNSDGSDNFELVKKSYGRNFSGISGCAWSPDGSRIAYISSDHNGSDRLV-TLNPDGSNEQ 59

Query: 385 LLVEDSNLQAPTWSPSGRSLIF--SRKKDGDTGSKLYSIDL 423
           ++   + + A  W+P    + F  +  +DG TG  +Y  DL
Sbjct: 60  IVASFAEISALAWAPDSSGMAFNAAYSEDGQTG--IYLADL 98


>gi|332665829|ref|YP_004448617.1| amidohydrolase [Haliscomenobacter hydrossis DSM 1100]
 gi|332334643|gb|AEE51744.1| amidohydrolase [Haliscomenobacter hydrossis DSM 1100]
          Length = 1162

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 4/130 (3%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIYS+ L     ++LTN +  +    +SPD  +I F SDR G E  + +     D  +I+
Sbjct: 113 DIYSIPLAGGKAKQLTNGMAYDTHPKWSPDGKKIAFTSDRSGSENAWYIDFEKQDTVQIT 172

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSP 399
           +D +       W+P G+ +  +K  G    + +  KDG     L+   E      P +  
Sbjct: 173 KDNDQHVQSVEWTPDGNYLIVSK-GGRNLKLFMFHKDGGGGTQLIKTPETLKCIEPAFGK 231

Query: 400 SGRSLIFSRK 409
             R + FSR+
Sbjct: 232 DSRYIWFSRR 241



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 82/190 (43%), Gaps = 24/190 (12%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +P+ SP+  K+ +   +     R+Y+MD   + +P+R+ N       P +S +G      
Sbjct: 397 DPKISPDGSKLTFTVLN-----RLYVMDYP-NGSPRRLTNANHTEAMPIWSPDGASIAYV 450

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------------R 322
             +++   IY V++ + A  +LT          +   +++IVF                 
Sbjct: 451 TWENKEGHIYKVNVATGANTKLTRNGATYYDLGWDAKTNRIVFNYSPAQVFEDAYSPFFS 510

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              E L  + ++G D  RI  +K  S  +P +    + I    FSG K  + + + DG+ 
Sbjct: 511 SPSENLAWISADGGDITRI--EKSNSRSNPHFVKADERIYL--FSGAKGLVSI-RWDGTD 565

Query: 383 ERLLVEDSNL 392
           E++ ++ S +
Sbjct: 566 EKVHLKVSGI 575


>gi|294497404|ref|YP_003561104.1| putative peptidase [Bacillus megaterium QM B1551]
 gi|294347341|gb|ADE67670.1| putative peptidase [Bacillus megaterium QM B1551]
          Length = 659

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 63/117 (53%), Gaps = 7/117 (5%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDS 313
           +  P+ S + K  + +V++ + ++      ++ +DL++  T++LT     N S  +SPD 
Sbjct: 20  VYNPQISPDRKSVVYTVRETKKIENAYETQLFMLDLETKETKQLTYYKGNNHSPVWSPDG 79

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             I F SDR    QLY++ + G + + ++ D E    +PVWSP  D I F+   GEK
Sbjct: 80  KWIAFLSDRSQAVQLYLLAATGGEAEALT-DLEKGVSNPVWSPYSDEIMFSTKVGEK 135



 Score = 43.5 bits (101), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 10/108 (9%)

Query: 310 SPDSSQIVFESDREGKE-------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           SPD   +V+ + RE K+       QL+++     + K+++  K  ++  PVWSP G  IA
Sbjct: 26  SPDRKSVVY-TVRETKKIENAYETQLFMLDLETKETKQLTYYKGNNH-SPVWSPDGKWIA 83

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
           F     +   + ++   G +   L + +  +  P WSP    ++FS K
Sbjct: 84  FLSDRSQAVQLYLLAATGGEAEALTDLEKGVSNPVWSPYSDEIMFSTK 131


>gi|127510948|ref|YP_001092145.1| amidohydrolase [Shewanella loihica PV-4]
 gi|126636243|gb|ABO21886.1| amidohydrolase [Shewanella loihica PV-4]
          Length = 1067

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 11/136 (8%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + ++    + L   +   +   YSPD   I F SD +G + ++VM ++G+D + ++
Sbjct: 79  DIYQMPIEGGEAKPLAQGIAWQMQPVYSPDGKYIAFTSDEDGGDNIWVMNADGTDPRPVT 138

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFSGEKFAIGVMK------KDGSQERLLV---EDSNL 392
           ++       P WSP    LI    F+G + ++G  +        G+  +L     E  +L
Sbjct: 139 KETFRLLNSPAWSPDSQYLIGRKHFTGSR-SLGAGEVWLYHVAGGTGVKLTERPNEQKDL 197

Query: 393 QAPTWSPSGRSLIFSR 408
             P +SP GR + FS+
Sbjct: 198 GEPAYSPDGRYVYFSQ 213



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 74/168 (44%), Gaps = 30/168 (17%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T   ++N+S S  PD  QIVF  D  G   +Y M   G + K ++Q   A    PV+SP
Sbjct: 55  VTEGTWMNVSVS--PDGKQIVF--DLLG--DIYQMPIEGGEAKPLAQGI-AWQMQPVYSP 107

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKK---- 410
            G  IAFT        I VM  DG+  R + +++   L +P WSP  + LI  RK     
Sbjct: 108 DGKYIAFTSDEDGGDNIWVMNADGTDPRPVTKETFRLLNSPAWSPDSQYLI-GRKHFTGS 166

Query: 411 -------------DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
                         G TG KL         +  +  PAY+ D ++V F
Sbjct: 167 RSLGAGEVWLYHVAGGTGVKLTE---RPNEQKDLGEPAYSPDGRYVYF 211


>gi|149186900|ref|ZP_01865209.1| hypothetical protein ED21_22118 [Erythrobacter sp. SD-21]
 gi|148829409|gb|EDL47851.1| hypothetical protein ED21_22118 [Erythrobacter sp. SD-21]
          Length = 1112

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 17/140 (12%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +      R+   L   I   +SPD S+I F SDR G + +++M ++GS++++++
Sbjct: 115 DIYTMPVSGGTPTRIAEGLAWEIQPRFSPDGSRIAFISDRGGGDNIWLMNTDGSNKQQVT 174

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVEDSN--- 391
            +       P WSP G  I   K         +GE +   V    G Q   LV+ ++   
Sbjct: 175 MEDFRLLNQPSWSPDGRYIVAKKHFTTQRSAGTGEIWLYHVSGGGGVQ---LVKRASEAV 231

Query: 392 ---LQAPTWSPSGRSLIFSR 408
              L  P ++P G ++ ++R
Sbjct: 232 QKELGEPIYAPDGNAIYYTR 251



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 9/139 (6%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           AS SPD   +VFES   GK  +  + S+ + ++ IS   ++    P WS  GD IAF ++
Sbjct: 413 ASVSPDGRTVVFES--LGKLYVKPVGSDAAPRRLISGSDDSLELWPAWSRDGDRIAFVRW 470

Query: 367 SGEKFA-IGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +      I  +   G  ER++  +  +   P +SP G +++F ++  G   S  YS    
Sbjct: 471 TDAGLGRIVTVDARGRNERVITRQQGHYAVPQFSPDGDTIVFEKRGGGFLTSPTYS---- 526

Query: 425 GRNETLINTPAYASDPQWV 443
             NE + +  A    P+ V
Sbjct: 527 -ENEGVYSVSASGGTPRLV 544



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 39/260 (15%)

Query: 200 GANIRYLTPSRDQ-ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           GA +R +    D+    +   SP+ + +A++   D     +Y M       P RI    +
Sbjct: 81  GATMREVAIDTDEGTWMDVAVSPDGRTLAFSMLGD-----IYTMPVS-GGTPTRIAEGLA 134

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV 317
             + PRFS +G R      +    +I+ ++   +  +++T   F  ++  S+SPD   IV
Sbjct: 135 WEIQPRFSPDGSRIAFISDRGGGDNIWLMNTDGSNKQQVTMEDFRLLNQPSWSPDGRYIV 194

Query: 318 ----FESDRE---GKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLIAFTK--F 366
               F + R    G+  LY +   G  Q  KR S+  +    +P+++P G+ I +T+   
Sbjct: 195 AKKHFTTQRSAGTGEIWLYHVSGGGGVQLVKRASEAVQKELGEPIYAPDGNAIYYTRNIT 254

Query: 367 SGEKFAIGVMKKDGSQ-----ERLLVEDSNLQA----------PTWSPSGRSLIFSRKKD 411
            G  F      +D +Q     ER  ++   +            P  SP GRS+ F R +D
Sbjct: 255 PGATFE---YAQDSTQGIFNIERYDIDTGEVTTAVGGYGGAVRPVPSPDGRSIAFVR-RD 310

Query: 412 GDTGSKLYSIDLNGRNETLI 431
            D  S+L+  DL+   E +I
Sbjct: 311 KDQ-SQLWVKDLSTGEERMI 329


>gi|319953311|ref|YP_004164578.1| peptidase s41 [Cellulophaga algicola DSM 14237]
 gi|319421971|gb|ADV49080.1| peptidase S41 [Cellulophaga algicola DSM 14237]
          Length = 1085

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 69/152 (45%), Gaps = 11/152 (7%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESD 321
           P  S  GKRA+     +   DI++V  ++   + +T T  I   A  +SP   +I + SD
Sbjct: 307 PNISPTGKRAVF----EHRGDIFTVPKENGTWKNITKTSGIADRAPVWSPQGDKIAWFSD 362

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G+ QL +   +G  +K         YF P WSP G  IA++      + I +M   G 
Sbjct: 363 ATGEYQLVIANQDGEQKKSYKLPNNTFYFKPDWSPDGKNIAYSDTDYNIWIINLMT--GK 420

Query: 382 QERLLVED----SNLQAPTWSPSGRSLIFSRK 409
            E++  +     +    PTWSP  + + F ++
Sbjct: 421 AEKVATDSYAHPTRTMNPTWSPDSQWIAFPKQ 452



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/81 (23%), Positives = 39/81 (48%), Gaps = 1/81 (1%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D++   L      RLT+      +  +S D   I F  + +G   +Y++ + G + KR
Sbjct: 39  ANDLWKTPLSGGEAIRLTSNEGYESNPHFSKDGKTIAFTGEYDGNVDVYIIPATGGEPKR 98

Query: 341 ISQDKEASYFDPVWSPQGDLI 361
           ++    A + +  W+P G+++
Sbjct: 99  LTYHPSADFVE-GWTPDGEVL 118



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 8/109 (7%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS +GK    + + D  +D+Y +       +RLT     +    ++PD  +++F S R
Sbjct: 65  PHFSKDGKTIAFTGEYDGNVDVYIIPATGGEPKRLTYHPSADFVEGWTPD-GEVLFRSGR 123

Query: 323 EGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           E K     +LY + + GS    I   + A+Y +  +S  G  IA+T  +
Sbjct: 124 ESKPTVTNKLYKVSAAGSFPTAIDIPR-AAYGE--FSKNGKYIAYTPIT 169


>gi|284036826|ref|YP_003386756.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Spirosoma linguale DSM 74]
 gi|283816119|gb|ADB37957.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Spirosoma linguale DSM 74]
          Length = 512

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 17/158 (10%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S + K  + +  ++   DIYSV        RLT    ++    Y+PD   I F S R G
Sbjct: 342 WSPDKKTLVFTGSRNNEYDIYSVPSAGGPEVRLTEAKGLDDGPEYTPDGKYIYFNSSRTG 401

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----------I 373
             Q+Y M+++GS+Q+ I+  +   +F P  SP G  I F  F  E+             +
Sbjct: 402 TMQIYRMKADGSEQEAITNGEFHDWF-PHISPDGKWIIFLSFLKEEVKPDDHPFYKHVYL 460

Query: 374 GVMKKDGSQERLLVE-----DSNLQAPTWSPSGRSLIF 406
            ++   GS +  ++         +  P+WSP  + + F
Sbjct: 461 RMLPISGSGQPKVIAYIYGGQGTINTPSWSPDSKRVAF 498


>gi|332530720|ref|ZP_08406649.1| hypothetical protein HGR_12282 [Hylemonella gracilis ATCC 19624]
 gi|332039810|gb|EGI76207.1| hypothetical protein HGR_12282 [Hylemonella gracilis ATCC 19624]
          Length = 638

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 101/223 (45%), Gaps = 43/223 (19%)

Query: 265 FSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           FSS+G+  + + ++D     ++Y         ERLT++  ++ +A +SPD S++ F S R
Sbjct: 71  FSSDGQWIVFTSERDGLGNSNLYRARADGTQVERLTDSPAVDDAAVFSPDGSKVAFVSTR 130

Query: 323 EG-KEQLYVMQSNGSDQKRIS----------QDKEASYFDPVWSPQGDLIAF-----TKF 366
           +G    ++V+       + ++          Q+  + +F P WSP G  +AF     T++
Sbjct: 131 DGFLANIWVLDLQTRKLRNLTGIKGVQADDLQNSPSGFFRPSWSPDGQWLAFSSDRNTEW 190

Query: 367 SG----------EKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            G          ++ +I V++ DG+  R +   +D  L +P WS  G+ ++F       T
Sbjct: 191 KGHHDGAGWEHTQELSIYVIRVDGTGLRRVASRKDHCLGSPRWSGDGKRIVFYETLAEYT 250

Query: 415 ------------GSKLYSIDLN-GRNETLINTPAYASDPQWVG 444
                        S++ S+D++ G        P +   PQ++G
Sbjct: 251 YWVLRPDLLLKIDSQIVSVDVDSGARTVHTEGPGFKISPQYIG 293



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 16/146 (10%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQ 338
           A  +Y  +   +    L ++  ++ +AS+S D   IVF S+R+  G   LY  +++G+  
Sbjct: 43  ASRLYIANADGSNERLLIDSGTLDYNASFSSDGQWIVFTSERDGLGNSNLYRARADGTQV 102

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVEDSNLQA--- 394
           +R++ D  A     V+SP G  +AF        A I V+     + R L     +QA   
Sbjct: 103 ERLT-DSPAVDDAAVFSPDGSKVAFVSTRDGFLANIWVLDLQTRKLRNLTGIKGVQADDL 161

Query: 395 ---------PTWSPSGRSLIFSRKKD 411
                    P+WSP G+ L FS  ++
Sbjct: 162 QNSPSGFFRPSWSPDGQWLAFSSDRN 187



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 42/202 (20%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQ 327
           G+  L+ V++D            +  E+LT+    N    SYS D  ++VF    E  + 
Sbjct: 447 GRAKLMRVRRD-----------GSGLEQLTDDSIFNAGFPSYSADGKEVVFRIANEDPKS 495

Query: 328 -----LYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFS------GEKFAIGV 375
                L V+       +RI+    A Y + P+WSP G  I F +           F +  
Sbjct: 496 ASLGGLAVLNLETRQIRRIT----AGYDNMPIWSPDGSRILFNRGVRNPNSIWSNFDLYT 551

Query: 376 MKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG------------DTGSKLYSID 422
           ++ DGS  +RL    ++   P W+P G+ ++++    G                +L+ +D
Sbjct: 552 VRPDGSDLQRLTSHPASDGHPVWTPDGKQILYNSGMAGYRDEACHYDQTFQPYGQLFVMD 611

Query: 423 LNGRNETLINTPAYA-SDPQWV 443
            +GRN+  I    +  S PQ+V
Sbjct: 612 ADGRNKRQITDSIWEDSTPQYV 633



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 10/104 (9%)

Query: 312 DSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA------FT 364
           DSS  +   D   + ++Y V + +G D   + +    ++F PVWSP G+ I       FT
Sbjct: 384 DSSVDIMRPDGSARRRVYDVSRQSGLDPVLVKRGLAGAFF-PVWSPDGEWIVFGVGEWFT 442

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIF 406
           +    +  +  +++DGS    L +DS   A  P++S  G+ ++F
Sbjct: 443 QRGRGRAKLMRVRRDGSGLEQLTDDSIFNAGFPSYSADGKEVVF 486


>gi|260061328|ref|YP_003194408.1| WD40-like beta Propeller protein [Robiginitalea biformata HTCC2501]
 gi|88785460|gb|EAR16629.1| WD40-like Beta Propeller protein [Robiginitalea biformata HTCC2501]
          Length = 368

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 93/212 (43%), Gaps = 30/212 (14%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           K  +  YD  DI    L    +D+     G      ++P+    G R + +  +   +++
Sbjct: 146 KYVWPVYDSFDIFVADLQGNIVDQLTDEPGYDAEATVSPQ----GDRIVFTSDRSGDLEL 201

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------------------ 326
           Y+++L  +   ++T+ L  +  A +SPD +QI+F + R   E                  
Sbjct: 202 YTMNLDGSDVRQITDELGYDGGAFFSPDGTQIIFRASRPETEAEIAEYKDLLSRGLVQPT 261

Query: 327 --QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKKDG 380
             +L++  ++GSD ++++    A++  P + P GD I F+       G  F + ++  DG
Sbjct: 262 EMELFICNADGSDLRQLTFLGNANW-SPFFHPDGDKILFSSNFESEGGFPFNLYLIGTDG 320

Query: 381 SQERLLVEDSNLQA-PTWSPSGRSLIFSRKKD 411
           +    +       A P +SP G+ L FS  ++
Sbjct: 321 TGLERVTHGQTFDAFPVFSPDGKYLAFSSNRN 352



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 84/196 (42%), Gaps = 31/196 (15%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++ DI+  DLQ N  ++LT+    +  A+ SP   +IVF SDR G  +LY M  +GSD +
Sbjct: 153 DSFDIFVADLQGNIVDQLTDEPGYDAEATVSPQGDRIVFTSDRSGDLELYTMNLDGSDVR 212

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--------------------IGVMKKD 379
           +I+ D+        +SP G  I F     E  A                    + +   D
Sbjct: 213 QIT-DELGYDGGAFFSPDGTQIIFRASRPETEAEIAEYKDLLSRGLVQPTEMELFICNAD 271

Query: 380 GSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTG--SKLYSIDLNG-------RNET 429
           GS  R L    N   +P + P G  ++FS   + + G    LY I  +G         +T
Sbjct: 272 GSDLRQLTFLGNANWSPFFHPDGDKILFSSNFESEGGFPFNLYLIGTDGTGLERVTHGQT 331

Query: 430 LINTPAYASDPQWVGF 445
               P ++ D +++ F
Sbjct: 332 FDAFPVFSPDGKYLAF 347


>gi|91773136|ref|YP_565828.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Methanococcoides burtonii DSM 6242]
 gi|91712151|gb|ABE52078.1| TolB-like beta propeller protein [Methanococcoides burtonii DSM
           6242]
          Length = 407

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 17/147 (11%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----- 363
           + P  ++IVF SDR G   ++VM  +G+ + ++S  +E    D  WS  G  IA+     
Sbjct: 192 WQPHGNKIVFRSDRGGYPDIWVMNYDGTGKLQLSNSEEKE-LDIKWSMDGTKIAYVSPSV 250

Query: 364 ------TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                 + F     +I VM  DGS ++ L    D     P +SP G  + F      ++ 
Sbjct: 251 LNTSNLSTFFNSSHSIWVMNSDGSDKKKLTGRHDRWDARPEFSPDGEKIAFDTTYKNESD 310

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQW 442
            K+  +D++G NET++   A    PQW
Sbjct: 311 PKIIVMDVDGTNETVL---AKGWMPQW 334



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 81/180 (45%), Gaps = 16/180 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-- 322
           +  +G + +    +    DI+ ++       +L+N+    +   +S D ++I + S    
Sbjct: 192 WQPHGNKIVFRSDRGGYPDIWVMNYDGTGKLQLSNSEEKELDIKWSMDGTKIAYVSPSVL 251

Query: 323 ---------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEK-F 371
                         ++VM S+GSD+K+++   +     P +SP G+ IAF T +  E   
Sbjct: 252 NTSNLSTFFNSSHSIWVMNSDGSDKKKLTGRHDRWDARPEFSPDGEKIAFDTTYKNESDP 311

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            I VM  DG+ E +L +      P WSP G  + F+ K   ++   + ++D   ++E  I
Sbjct: 312 KIIVMDVDGTNETVLAKG---WMPQWSPMGNKIAFTGKSGNNSVVSVIALDEKFKSEPAI 368



 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 8/77 (10%)

Query: 175 SRILFVSESVVSGI-------IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           ++I +VS SV++           +S+ VM+ DG++ + LT   D+    P FSP+ +K+A
Sbjct: 241 TKIAYVSPSVLNTSNLSTFFNSSHSIWVMNSDGSDKKKLTGRHDRWDARPEFSPDGEKIA 300

Query: 228 Y-ATYDDEDILRVYLMD 243
           +  TY +E   ++ +MD
Sbjct: 301 FDTTYKNESDPKIIVMD 317



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 28/166 (16%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQD 344
           + +N T  LT+    N    +SPD   IV+ +  E    G  + ++M  +GS++ +++  
Sbjct: 20  VSANETIELTDGTESNGFPQWSPDGEMIVYHTLSEVGAIGNTKTWMMDIDGSNKTQLTSG 79

Query: 345 KEA------SYFDPV---WSPQGDLIAFTKFSGE----------KFAIGVMKKDGSQERL 385
           K        S F P    WSP GD + +    G           K  I +M  DG+ +  
Sbjct: 80  KSLGPLFLISGFSPTDNPWSPDGDKLLYGSLLGVEIIGDIPVFLKTDIQIMNADGTSKNK 139

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +   SN +   W+ +   +        D   KL+ ++ +G  + LI
Sbjct: 140 VKGSSNAEYYGWAQNTTKIFMV-----DKSKKLWLLNPDGTEKVLI 180


>gi|302806842|ref|XP_002985152.1| hypothetical protein SELMODRAFT_121622 [Selaginella moellendorffii]
 gi|300146980|gb|EFJ13646.1| hypothetical protein SELMODRAFT_121622 [Selaginella moellendorffii]
          Length = 669

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 57/119 (47%), Gaps = 10/119 (8%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLI 361
           N   S SPD   +VF S R G + LY+M +   +   I    E  + D  P WSP G+ I
Sbjct: 468 NAFPSCSPDGKNLVFRSGRSGHKNLYIMDAELGEDGGIRALTEGPWVDTMPCWSPDGNWI 527

Query: 362 AFTKF----SGEKFAIGVMKKDGSQ-ERLLVEDSN---LQAPTWSPSGRSLIFSRKKDG 412
           AF+      S E FAI ++  DGS+  R+  E S         +SP  ++L+F+    G
Sbjct: 528 AFSSSRDGPSNEFFAIYLVHPDGSELHRVFPESSTRGRCNHVCFSPDSQTLLFTADCGG 586


>gi|255311420|ref|ZP_05353990.1| translocation protein TolB [Chlamydia trachomatis 6276]
 gi|255317721|ref|ZP_05358967.1| translocation protein TolB [Chlamydia trachomatis 6276s]
          Length = 431

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 11/284 (3%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF--VSESVVSGIIKN 191
           K  ++I   +    P+   +  H  +D I+  +T   G  + +I+F   + +  + + + 
Sbjct: 103 KGSQKIFSLELSGDPSKDHQAIHEAADRIHFLLTRVPGISSGKIIFSLCATNSSTELKQG 162

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +D DG ++  LT +   +   P +       AY     +  +    ++T    A K
Sbjct: 163 ELWSVDYDGQHLYPLT-NEHSLSVTPTWMHISHIPAYMYVSYKLGVPKIFLNTLNQPAGK 221

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNA---TERLTNTLF-INI 305
           +I   +     P FS   K       +D   D++  S  L + A    ++L N  F    
Sbjct: 222 KILAMQGNQFMPTFSPKTKLLAFISDRDGNPDLFVQSFSLATGAIGTPKKLLNEAFGTQG 281

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           + S+SPD +++VF S+++G  ++Y MQ S      R+   K  +   P WSP G  IAF 
Sbjct: 282 NPSFSPDGTRLVFVSNKDGTPRIYQMQISPEQHSPRLLTKKYRNSSCPTWSPDGKKIAFC 341

Query: 365 KFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                   I V     G  E+L     + ++P+W+     L++S
Sbjct: 342 SVIKGVRQICVYDLASGRDEQLTTSTEHKESPSWAADSNHLVYS 385


>gi|170724385|ref|YP_001758411.1| amidohydrolase [Shewanella woodyi ATCC 51908]
 gi|169809732|gb|ACA84316.1| amidohydrolase [Shewanella woodyi ATCC 51908]
          Length = 1069

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + ++    + L   +   +   YSPD   I F SD +G + +++M+++GS  + ++
Sbjct: 75  DIYQMPIEGGEAKVLAEGIAWQMQPVYSPDGKYIAFTSDEDGGDNIWIMEADGSKPRAVT 134

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFSGEK----FAIGVMKKDGSQERLLVEDSN----LQ 393
           ++       P WSP    L+A   ++G +      + +    G +   L E  N    L 
Sbjct: 135 EETFRLLNSPAWSPDSQYLVARKHYTGSRSLGAGEVWMYHVAGGEGVKLTERPNEQKDLG 194

Query: 394 APTWSPSGRSLIFSR 408
            P +SP GR + FS+
Sbjct: 195 EPAYSPDGRYIYFSQ 209



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 9/118 (7%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T   ++N+S S  PD   IVF  D  G   +Y M   G + K +++   A    PV+SP
Sbjct: 51  VTEGTWMNVSVS--PDGKNIVF--DMLG--DIYQMPIEGGEAKVLAEGI-AWQMQPVYSP 103

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDG 412
            G  IAFT        I +M+ DGS+ R + E++   L +P WSP  + L+  +   G
Sbjct: 104 DGKYIAFTSDEDGGDNIWIMEADGSKPRAVTEETFRLLNSPAWSPDSQYLVARKHYTG 161



 Score = 43.1 bits (100), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 22/157 (14%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           A  SPD  ++V+E+   GK  L+V   SNG   +    D E     P WS  G  I F+ 
Sbjct: 371 AQVSPDGKKVVYEA--LGK--LWVKSLSNGKRTRLTKLDSELRELFPQWSRDGKSIVFST 426

Query: 366 FSGE-KFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG---------DT 414
           +  E + +I ++  ++   + L  E      PT+SP G  +++ + K G         +T
Sbjct: 427 WDDEEQGSIRIVNVRNKRVKTLTKEPGKYVEPTFSPDGSFVVYRKAKGGYITPRTWSQET 486

Query: 415 GSKLYSIDLNGRNETLINT----PAYASDPQWVGFMD 447
           G  LY +D+ G+    I      P + +D   V FMD
Sbjct: 487 G--LYRVDIKGKESIKITPDGYQPQFGADSDRVYFMD 521


>gi|119773170|ref|YP_925910.1| amidohydrolase [Shewanella amazonensis SB2B]
 gi|119765670|gb|ABL98240.1| conserved hypothetical amidohydrolase [Shewanella amazonensis SB2B]
          Length = 1062

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 15/138 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY +  +    E L + +   +   YSPD   I F SD++G + L+VM ++G + + ++
Sbjct: 71  DIYRIPAKGGEAEVLASGIAWQMQPVYSPDGKYIAFTSDQDGGDNLWVMDADGKNPRAVT 130

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVEDSN--- 391
           ++       P WSP    +   K         +GE +   +   +G Q   L E  N   
Sbjct: 131 KETFRLINSPAWSPDSQYLVGRKHFTASRSLGAGEVWLYHISGGEGVQ---LTERPNDQK 187

Query: 392 -LQAPTWSPSGRSLIFSR 408
            L  P +SP GR + FS+
Sbjct: 188 DLGEPAYSPDGRYIYFSQ 205



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 14/114 (12%)

Query: 339 KRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +++S D  E ++ +   SP G  I F    G+ + I    K G  E L    +    P +
Sbjct: 41  EKVSVDVNEGTWMNLSLSPDGKYIVF-DLLGDIYRIPA--KGGEAEVLASGIAWQMQPVY 97

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRN------ET--LINTPAYASDPQWV 443
           SP G+ + F+  +DG  G  L+ +D +G+N      ET  LIN+PA++ D Q++
Sbjct: 98  SPDGKYIAFTSDQDG--GDNLWVMDADGKNPRAVTKETFRLINSPAWSPDSQYL 149


>gi|283781895|ref|YP_003372650.1| WD40 domain-containing protein beta propeller [Pirellula staleyi
           DSM 6068]
 gi|283440348|gb|ADB18790.1| WD40 domain protein beta Propeller [Pirellula staleyi DSM 6068]
          Length = 360

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 65/137 (47%), Gaps = 14/137 (10%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D   +++  DL     ++LTN    +   +YS D   I F SDR+G   LYVM S+G+  
Sbjct: 151 DPYTEMFEADLDGKILKQLTNEKGYDAEGAYSKDGKLIAFCSDRDGDADLYVMNSDGTGV 210

Query: 339 KRISQDKEASYFD--PVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLVEDSN 391
           ++++    A  +D  P  SP G  + F     EK     F IG+   DG  E  L + + 
Sbjct: 211 RQLTN---APGYDGGPFISPDGKWVVFRSDRKEKDMLQLFVIGI---DGKNETQLTDTNG 264

Query: 392 LQ-APTWSPSGRSLIFS 407
           +   P W PS   +I+S
Sbjct: 265 VNWGPYWHPSEPIIIWS 281



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 81/190 (42%), Gaps = 18/190 (9%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           K++ N +       +S +GK       +D   D+Y ++       +LTN    +     S
Sbjct: 167 KQLTNEKGYDAEGAYSKDGKLIAFCSDRDGDADLYVMNSDGTGVRQLTNAPGYDGGPFIS 226

Query: 311 PDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---- 364
           PD   +VF SDR+ K+  QL+V+  +G ++ +++ D     + P W P   +I ++    
Sbjct: 227 PDGKWVVFRSDRKEKDMLQLFVIGIDGKNETQLT-DTNGVNWGPYWHPSEPIIIWSGADH 285

Query: 365 ---------KFSGEKFAIGVMK--KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                         ++ I      K G+ +R+         P +SP G+ L+++  +  D
Sbjct: 286 SDPTARPNYDLWAARYEIASDGKFKLGTTQRVTDFAGADVLPVFSPDGKKLMWTSTRSDD 345

Query: 414 TGSKLYSIDL 423
             S+L+  D 
Sbjct: 346 HSSQLFLADF 355



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 105/273 (38%), Gaps = 29/273 (10%)

Query: 180 VSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT----YD 232
           V  SVV+   G+  +   +  +   NI+ LT    +   E  FSP+ +++ Y      Y 
Sbjct: 18  VHTSVVAQPPGVASSGPSIEAKTLGNIKQLTSGFVKA-GEGYFSPDGKQIVYQAQPLDYP 76

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQS 291
              I R  L   R    P +I   R       FS +G + L  S   D A+D      + 
Sbjct: 77  FYQIFRQSLDGGR----PLQISTGRGRTTCSYFSIDGTKILFASSHLDPAIDATEAAERK 132

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              E   + +       + P +   +FE+D +GK    +    G        D E +Y  
Sbjct: 133 QQEEDKKSGVRRRYKWDFDPYTE--MFEADLDGKILKQLTNEKG-------YDAEGAY-- 181

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKK 410
              S  G LIAF         + VM  DG+  R L         P  SP G+ ++F   +
Sbjct: 182 ---SKDGKLIAFCSDRDGDADLYVMNSDGTGVRQLTNAPGYDGGPFISPDGKWVVFRSDR 238

Query: 411 DGDTGSKLYSIDLNGRNET-LINTPAYASDPQW 442
                 +L+ I ++G+NET L +T      P W
Sbjct: 239 KEKDMLQLFVIGIDGKNETQLTDTNGVNWGPYW 271


>gi|297748729|gb|ADI51275.1| Tolb [Chlamydia trachomatis D-EC]
 gi|297749609|gb|ADI52287.1| Tolb [Chlamydia trachomatis D-LC]
          Length = 432

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 11/284 (3%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF--VSESVVSGIIKN 191
           K  ++I   +    P+   +  H  +D I+  +T   G  + +I+F   + +  + + + 
Sbjct: 104 KGSQKIFSLELSGDPSKDHQAIHEAADRIHFLLTRVPGISSGKIIFSLCATNSSTELKQG 163

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +D DG ++  LT +   +   P +       AY     +  +    ++T    A K
Sbjct: 164 ELWSVDYDGQHLYPLT-NEHSLSVTPTWMHISHIPAYMYVSYKLGVPKIFLNTLNQPAGK 222

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNA---TERLTNTLF-INI 305
           +I   +     P FS   K       +D   D++  S  L + A    ++L N  F    
Sbjct: 223 KILAMQGNQFMPTFSPKTKLLAFISDRDGNPDLFVQSFSLATGAIGTPKKLLNEAFGTQG 282

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           + S+SPD +++VF S+++G  ++Y MQ S      R+   K  +   P WSP G  IAF 
Sbjct: 283 NPSFSPDGTRLVFVSNKDGTPRIYQMQISPEQHSPRLLTKKYRNSSCPTWSPDGKKIAFC 342

Query: 365 KFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                   I V     G  E+L     + ++P+W+     L++S
Sbjct: 343 SVIKGVRQICVYDLASGRDEQLTTSTEHKESPSWAADSNHLVYS 386


>gi|171321510|ref|ZP_02910451.1| translocation protein TolB [Burkholderia ambifaria MEX-5]
 gi|171093218|gb|EDT38425.1| translocation protein TolB [Burkholderia ambifaria MEX-5]
          Length = 219

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 2/187 (1%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP +S +     +++       IY+V+       RLT +  I+    YSPD   I F SD
Sbjct: 32  APAWSPDSNTLAVALSLTGNTQIYTVNANGGGLRRLTQSSSIDTEPYYSPDGRWIYFTSD 91

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           R G  Q+Y M + G       +      ++  P  SP G L+A+   +G  F + V    
Sbjct: 92  RGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRISPDGKLLAYISRTGGGFKLYVQDLQ 151

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                 +   +  ++P+++ +G+ L+++ +  G         D +   + L        +
Sbjct: 152 TGAANAITNTNRDESPSFAANGQYLLYATQSGGRNVLAAVPSDGSAPPQILSVQGGSVRE 211

Query: 440 PQWVGFM 446
           P W  FM
Sbjct: 212 PSWGPFM 218



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 13/170 (7%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +Y  DL +     +++    N + ++SPDS+ +       G  Q+Y + +NG   +R++Q
Sbjct: 10  VYIHDLPTGRRYMVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNANGGGLRRLTQ 69

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM----KKDGSQERLLVEDSNLQAPTWSP 399
                  +P +SP G  I FT   G    I  M    +  G+ +R+    S   +P  SP
Sbjct: 70  SSSID-TEPYYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRISP 128

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT-----PAYASDPQWV 443
            G+ L +  +  G  G KLY  DL  G    + NT     P++A++ Q++
Sbjct: 129 DGKLLAYISRTGG--GFKLYVQDLQTGAANAITNTNRDESPSFAANGQYL 176



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 5/166 (3%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA--P 250
           +  ++ +G  +R LT S   I  EP +SP+ + + Y T D     ++Y M  + + A   
Sbjct: 54  IYTVNANGGGLRRLTQS-SSIDTEPYYSPDGRWI-YFTSDRGGAPQIYRMPAQGESAGAA 111

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +R+    S   +PR S +GK      +      +Y  DLQ+ A   +TNT   + S S++
Sbjct: 112 QRVTFTGSYNTSPRISPDGKLLAYISRTGGGFKLYVQDLQTGAANAITNT-NRDESPSFA 170

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            +   +++ +   G+  L  + S+GS   +I   +  S  +P W P
Sbjct: 171 ANGQYLLYATQSGGRNVLAAVPSDGSAPPQILSVQGGSVREPSWGP 216


>gi|255690149|ref|ZP_05413824.1| MdsD protein [Bacteroides finegoldii DSM 17565]
 gi|260624433|gb|EEX47304.1| MdsD protein [Bacteroides finegoldii DSM 17565]
          Length = 1101

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 75/151 (49%), Gaps = 23/151 (15%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
           A  SPD S+IVF      K  +Y + + G    +++   +ASY  +PVWSP G+ IAF  
Sbjct: 30  ARISPDGSEIVFCY----KGDIYKVSAQGGTAVQLT--TQASYEANPVWSPDGEQIAFAS 83

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRK-KDGDTG-------- 415
                F + +M  DG   R L   S  + P T++P G+ ++FS   +D  T         
Sbjct: 84  DRNGNFDLFIMSADGGAARRLTYHSASEIPSTFTPDGKYVLFSASIQDPATSALFPTSAM 143

Query: 416 SKLYSIDLNGRN-ETLINTPAYASDPQWVGF 445
           ++LY + + G N E ++ TPA     +WV F
Sbjct: 144 TELYRVPVEGGNTEQVLGTPA-----EWVCF 169



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  Q     +LT       +  +SPD  QI F SDR G   L++M ++G   +R++
Sbjct: 46  DIYKVSAQGGTAVQLTTQASYEANPVWSPDGEQIAFASDRNGNFDLFIMSADGGAARRLT 105

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++P G  + F+
Sbjct: 106 Y-HSASEIPSTFTPDGKYVLFS 126


>gi|15605329|ref|NP_220115.1| translocation protein TolB [Chlamydia trachomatis D/UW-3/CX]
 gi|76789337|ref|YP_328423.1| translocation protein TolB [Chlamydia trachomatis A/HAR-13]
 gi|166154813|ref|YP_001654931.1| translocation protein TolB [Chlamydia trachomatis 434/Bu]
 gi|166155688|ref|YP_001653943.1| translocation protein TolB [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|237803027|ref|YP_002888221.1| translocation protein TolB [Chlamydia trachomatis B/Jali20/OT]
 gi|237804948|ref|YP_002889102.1| translocation protein TolB [Chlamydia trachomatis B/TZ1A828/OT]
 gi|301336091|ref|ZP_07224335.1| translocation protein TolB [Chlamydia trachomatis L2tet1]
 gi|6647882|sp|O84604|TOLB_CHLTR RecName: Full=Protein tolB; Flags: Precursor
 gi|119371040|sp|Q3KL97|TOLB_CHLTA RecName: Full=Protein tolB; Flags: Precursor
 gi|226705873|sp|B0B8H3|TOLB_CHLT2 RecName: Full=Protein tolB; Flags: Precursor
 gi|226705874|sp|B0BA52|TOLB_CHLTB RecName: Full=Protein tolB; Flags: Precursor
 gi|3329043|gb|AAC68201.1| component of a macromolecule transport system [Chlamydia
           trachomatis D/UW-3/CX]
 gi|76167867|gb|AAX50875.1| TolB [Chlamydia trachomatis A/HAR-13]
 gi|165930801|emb|CAP04299.1| outer membrane component of membrane transport system [Chlamydia
           trachomatis 434/Bu]
 gi|165931676|emb|CAP07253.1| outer membrane component of membrane transport system [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
 gi|231273248|emb|CAX10163.1| outer membrane component of membrane transport system [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|231274261|emb|CAX11056.1| outer membrane component of membrane transport system [Chlamydia
           trachomatis B/Jali20/OT]
 gi|296436134|gb|ADH18308.1| translocation protein TolB [Chlamydia trachomatis G/9768]
 gi|296437062|gb|ADH19232.1| translocation protein TolB [Chlamydia trachomatis G/11222]
 gi|296437994|gb|ADH20155.1| translocation protein TolB [Chlamydia trachomatis G/11074]
 gi|297140496|gb|ADH97254.1| translocation protein TolB [Chlamydia trachomatis G/9301]
          Length = 431

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 11/284 (3%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF--VSESVVSGIIKN 191
           K  ++I   +    P+   +  H  +D I+  +T   G  + +I+F   + +  + + + 
Sbjct: 103 KGSQKIFSLELSGDPSKDHQAIHEAADRIHFLLTRVPGISSGKIIFSLCATNSSTELKQG 162

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +D DG ++  LT +   +   P +       AY     +  +    ++T    A K
Sbjct: 163 ELWSVDYDGQHLYPLT-NEHSLSVTPTWMHISHIPAYMYVSYKLGVPKIFLNTLNQPAGK 221

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNA---TERLTNTLF-INI 305
           +I   +     P FS   K       +D   D++  S  L + A    ++L N  F    
Sbjct: 222 KILAMQGNQFMPTFSPKTKLLAFISDRDGNPDLFVQSFSLATGAIGTPKKLLNEAFGTQG 281

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           + S+SPD +++VF S+++G  ++Y MQ S      R+   K  +   P WSP G  IAF 
Sbjct: 282 NPSFSPDGTRLVFVSNKDGTPRIYQMQISPEQHSPRLLTKKYRNSSCPTWSPDGKKIAFC 341

Query: 365 KFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                   I V     G  E+L     + ++P+W+     L++S
Sbjct: 342 SVIKGVRQICVYDLASGRDEQLTTSTEHKESPSWAADSNHLVYS 385


>gi|304412719|ref|ZP_07394322.1| amidohydrolase [Shewanella baltica OS183]
 gi|307305816|ref|ZP_07585562.1| amidohydrolase [Shewanella baltica BA175]
 gi|304348929|gb|EFM13344.1| amidohydrolase [Shewanella baltica OS183]
 gi|306911309|gb|EFN41735.1| amidohydrolase [Shewanella baltica BA175]
          Length = 1062

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 15/138 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +       L   +   +   YSPD   I F SD +G + +++M ++GS+ + ++
Sbjct: 73  DIYQIPVSGGEARPLAQGIAWQMQPVYSPDGKHIAFTSDGDGGDNIWLMDADGSNPRTVT 132

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMKKDGSQERLLVEDSN--- 391
           Q+       P WSP    L+A   F+       GE +   V   +G +   L E  N   
Sbjct: 133 QETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHVAGGEGVK---LTERPNDQK 189

Query: 392 -LQAPTWSPSGRSLIFSR 408
            L  P +SP GR + FS+
Sbjct: 190 DLGEPAYSPDGRYIYFSQ 207



 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 15/107 (14%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSL 404
           E ++ +   SP G  + F    G+ + I V    G + R L +    Q  P +SP G+ +
Sbjct: 51  EGTWMNLSISPDGKHVVF-DLLGDIYQIPV---SGGEARPLAQGIAWQMQPVYSPDGKHI 106

Query: 405 IFSRKKDGDTGSKLYSIDLNGRN------ET--LINTPAYASDPQWV 443
            F+   DGD G  ++ +D +G N      ET  L+N+PA++ D Q++
Sbjct: 107 AFT--SDGDGGDNIWLMDADGSNPRTVTQETFRLLNSPAWSPDSQYL 151



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 12/141 (8%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  SPD S++ FE+   GK  L  +  +G   +    +       P WS  G  I FT +
Sbjct: 369 AQVSPDGSKVAFEA--LGKIWLKSL-PDGKMSRLTELNNGIEELYPQWSRDGKNIVFTTW 425

Query: 367 SGE-KFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK------- 417
           + + +  + V+  K G  ++L  E      PT+SP G  +++ + + G+   +       
Sbjct: 426 NDQDQGTVQVISAKGGKPKQLTSEPGKYVEPTFSPDGELVVYRKTQGGNLTPRTWSQEPG 485

Query: 418 LYSIDLNGRNETLINTPAYAS 438
           LY +D+ G+    I+   Y +
Sbjct: 486 LYKVDIKGKQNKKISADGYQA 506


>gi|190892048|ref|YP_001978590.1| periplasmic component of the Tol biopolymer transport system
           protein [Rhizobium etli CIAT 652]
 gi|218514537|ref|ZP_03511377.1| putative periplasmic component of the Tol biopolymer transport
           system protein [Rhizobium etli 8C-3]
 gi|190697327|gb|ACE91412.1| putative periplasmic component of the Tol biopolymer transport
           system protein [Rhizobium etli CIAT 652]
          Length = 276

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G++      +D+  DIY++ +      RLT+    N    YS D   I F S R G
Sbjct: 116 WSPDGRQLAYCGIRDDLFDIYTISVDGGVETRLTHGEGRNDGPDYSADGQWIYFNSSRTG 175

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVM 376
             Q++ +  +G+  ++++ D + ++F    SP+ D +    +    F         + +M
Sbjct: 176 LMQIWRIHPDGTGLEQVTSDNQGNWFAHP-SPKNDKVLILSYDPSVFDHPRDLDVRLRLM 234

Query: 377 KKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
             DG   + L E       +  P WSP G    + R
Sbjct: 235 DMDGGNLKTLFELFGGQGTINVPCWSPDGDEFAYVR 270



 Score = 45.1 bits (105), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 47/227 (20%), Positives = 96/227 (42%), Gaps = 41/227 (18%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H IS D  + +  +K +F                K+S+ ++  +G   R +T   +Q  +
Sbjct: 70  HGISPDGTEIVISDKSEFG---------------KSSIYILPIEGGTPRLVT--ENQPSY 112

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLM------DTRIDRAPKRIGNFRSMILAPRFSSNG 269
              +SP+ +++AY    D D+  +Y +      +TR+     R          P +S++G
Sbjct: 113 WHGWSPDGRQLAYCGIRD-DLFDIYTISVDGGVETRLTHGEGRND-------GPDYSADG 164

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--------VFESD 321
           +    +  +   M I+ +       E++T+    N  A  SP + ++        VF+  
Sbjct: 165 QWIYFNSSRTGLMQIWRIHPDGTGLEQVTSDNQGNWFAHPSPKNDKVLILSYDPSVFDHP 224

Query: 322 REGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKF 366
           R+   +L +M  +G + K + +    + +   P WSP GD  A+ ++
Sbjct: 225 RDLDVRLRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGDEFAYVRY 271



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 10/99 (10%)

Query: 355 SPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           SP G  I  + K    K +I ++  +G   RL+ E+       WSP GR L +   +  D
Sbjct: 73  SPDGTEIVISDKSEFGKSSIYILPIEGGTPRLVTENQPSYWHGWSPDGRQLAYCGIR--D 130

Query: 414 TGSKLYSIDLNGRNETLI-------NTPAYASDPQWVGF 445
               +Y+I ++G  ET +       + P Y++D QW+ F
Sbjct: 131 DLFDIYTISVDGGVETRLTHGEGRNDGPDYSADGQWIYF 169


>gi|153005706|ref|YP_001380031.1| WD40 domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152029279|gb|ABS27047.1| WD40 domain protein beta Propeller [Anaeromyxobacter sp. Fw109-5]
          Length = 357

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/281 (22%), Positives = 125/281 (44%), Gaps = 45/281 (16%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F+ R L V ++   G   + L VM  DG+ +R ++  + ++     F P  +++ Y++  
Sbjct: 64  FDGREL-VFQATPEGAGCDQLYVMGADGSGLRRVSRGKGRVTCG-YFFPGGERIVYSSTH 121

Query: 233 --------DEDILRVY---LMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRA-----LIS 275
                     D  + Y   L D ++  A     +   +  AP ++++    +     + +
Sbjct: 122 ASAAECPPKPDHSKGYVWALYDYQLYTARPDGSDLAPLAPAPGKYNAEATVSKDGWIVFT 181

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------------- 321
             +D  +++Y + L  +   RLT+T   +  A +S D  +IVF +               
Sbjct: 182 STRDGDLELYKMRLDGSGLVRLTHTPGYDGGAFFSADGRRIVFRASRPTTEAELADYRAL 241

Query: 322 ------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----KF 371
                 R GK +L+ M ++GSD +++++   AS F P + P G  I F    G+     F
Sbjct: 242 LGEGLVRPGKLELFTMNADGSDVRQVTRLGAAS-FAPFFHPDGRRIVFASNVGDPRGRNF 300

Query: 372 AIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            + V+  DG+  ER+   ++    P +SP G+ L+F+  ++
Sbjct: 301 DLYVVNDDGTGLERITTNETFDGFPMFSPDGKRLVFASNRN 341


>gi|254494925|ref|ZP_01052559.2| peptidase family S41 [Polaribacter sp. MED152]
 gi|213690507|gb|EAQ41987.2| peptidase family S41 [Polaribacter sp. MED152]
          Length = 1080

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 5/103 (4%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESD 321
           P  S  GKRA+   + +    I++V  ++     LTN+  I + S  +SP   Q+ + SD
Sbjct: 307 PNISPKGKRAIFEYRGE----IFTVPKENGTWRNLTNSSGIADRSPIWSPKGDQVAWFSD 362

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           + G+ +L +   NG++Q+ I       YF P WSP G  IA+T
Sbjct: 363 KNGEYELVLADQNGNNQEFIKLPNPTFYFQPDWSPNGKYIAYT 405



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +P+FS +G+    + Q D  +D+Y V +     +RLT     +I   ++PD  +I+F S+
Sbjct: 64  SPKFSKDGQWIAFTAQYDGNIDVYLVSINGGEPKRLTYHSASDIVQGWTPD-GKILFRSN 122

Query: 322 REGK----EQLYVMQSNGS 336
           REG+     + Y + + G 
Sbjct: 123 REGRPTQTNKFYTIGAEGG 141


>gi|149922524|ref|ZP_01910955.1| tol-pal system beta propeller repeat protein TolB [Plesiocystis
           pacifica SIR-1]
 gi|149816632|gb|EDM76126.1| tol-pal system beta propeller repeat protein TolB [Plesiocystis
           pacifica SIR-1]
          Length = 418

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 100/218 (45%), Gaps = 21/218 (9%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +Q  FEP  SP+ ++VA+ +  D D   +Y M T    AP R+        APR+S++G+
Sbjct: 203 EQGNFEPALSPDGERVAFVSSRDGDA-ELYTM-TADGGAPTRLTTSPGDDSAPRWSADGQ 260

Query: 271 R-ALISVQK-DEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGK 325
             A +S +  D  MD++ +       + L    +   +    S SPD +++ F    +G 
Sbjct: 261 TLAFVSARDLDRGMDVFVIPAAGGEAKALLPARDAPVLVRDLSVSPDGTKLAFTELSQGA 320

Query: 326 EQLYVMQS--NGSDQKRISQDKEASYF------DPVWSPQGDLIAFTKFSG-EKFAIGVM 376
               V+ S   G+   R  +  E +         PVWSP G  +AFT+ SG ++  I  M
Sbjct: 321 GAAVVVVSFPEGAVLARSRERGEGAGATPLIDEQPVWSPDGKHLAFTRGSGPDRSDILRM 380

Query: 377 KKDGSQE-RLLVEDSNLQA----PTWSPSGRSLIFSRK 409
             DG +   L +  S+ +     P WSP+  +   +R+
Sbjct: 381 DADGRERVNLTMGPSDNRGVHWLPRWSPTSATSSCARR 418



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 28/192 (14%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           GNF      P  S +G+R      +D   ++Y++     A  RLT +   + +  +S D 
Sbjct: 205 GNFE-----PALSPDGERVAFVSSRDGDAELYTMTADGGAPTRLTTSPGDDSAPRWSADG 259

Query: 314 SQIVFESDREGKEQL--YVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFS-G 368
             + F S R+    +  +V+ + G + K +   ++A     D   SP G  +AFT+ S G
Sbjct: 260 QTLAFVSARDLDRGMDVFVIPAAGGEAKALLPARDAPVLVRDLSVSPDGTKLAFTELSQG 319

Query: 369 EKFAIGVM-------------KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
              A+ V+             + +G+    L+++     P WSP G+ L F+R    D  
Sbjct: 320 AGAAVVVVSFPEGAVLARSRERGEGAGATPLIDEQ----PVWSPDGKHLAFTRGSGPDR- 374

Query: 416 SKLYSIDLNGRN 427
           S +  +D +GR 
Sbjct: 375 SDILRMDADGRE 386



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/124 (31%), Positives = 58/124 (46%), Gaps = 7/124 (5%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQ--SNGSDQK---RISQDKEASYFDPVWSPQGDLIA 362
           S  P    +VFESD      LY ++  SNG D     R++ D++ + F+P  SP G+ +A
Sbjct: 161 SRDPAGRFLVFESDANSFRDLYRLELSSNGGDAPSVLRLTGDEQGN-FEPALSPDGERVA 219

Query: 363 FTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           F         +  M  DG +  RL     +  AP WS  G++L F   +D D G  ++ I
Sbjct: 220 FVSSRDGDAELYTMTADGGAPTRLTTSPGDDSAPRWSADGQTLAFVSARDLDRGMDVFVI 279

Query: 422 DLNG 425
              G
Sbjct: 280 PAAG 283



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 6/111 (5%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-----RLTNTLFINISASYSPD 312
           +MI  P     G+  +     +   D+Y ++L SN  +     RLT     N   + SPD
Sbjct: 155 AMIRNPSRDPAGRFLVFESDANSFRDLYRLELSSNGGDAPSVLRLTGDEQGNFEPALSPD 214

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             ++ F S R+G  +LY M ++G    R++         P WS  G  +AF
Sbjct: 215 GERVAFVSSRDGDAELYTMTADGGAPTRLTT-SPGDDSAPRWSADGQTLAF 264


>gi|149919246|ref|ZP_01907729.1| WD40-like Beta Propeller protein [Plesiocystis pacifica SIR-1]
 gi|149819960|gb|EDM79382.1| WD40-like Beta Propeller protein [Plesiocystis pacifica SIR-1]
          Length = 1034

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 17/192 (8%)

Query: 204 RYLTPSR---DQILF-----EPRFSPNQQKVAYATYDDEDILRVYL-MDTRIDRAPKRIG 254
           R+  PSR   +Q+ F      P  SP+ + VA+   D       +L +DT   R  + +G
Sbjct: 416 RWKGPSRRGREQLTFGMRARAPDVSPDGRTVAFVRNDSGQSRIAFLALDTLEVRELEPLG 475

Query: 255 NFRS------MILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISA 307
             R           P +  +G +   S  +D    DIY  DL++  TER+T     + S 
Sbjct: 476 TGRGSGVELQQAYDPDWHPSGTKVAYSAWRDGGWRDIYVHDLETQTTERITADRAQDNSP 535

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD   ++F SDR G   LY   +  S Q R   +     F+P  S  G+ IA+  +S
Sbjct: 536 EWSPDGRWLLFSSDRSGVFNLYAFDTE-SGQTRQVSNVLGGAFEPAISHDGERIAYVGYS 594

Query: 368 GEKFAIGVMKKD 379
              + +  M  D
Sbjct: 595 STGYDLWAMDFD 606



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 13/142 (9%)

Query: 310 SPDSSQIVFESDREGK--------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           SPD   + F  +  G+        + L V +       R S  +    +DP W P G  +
Sbjct: 440 SPDGRTVAFVRNDSGQSRIAFLALDTLEVRELEPLGTGRGSGVELQQAYDPDWHPSGTKV 499

Query: 362 AFTKF-SGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           A++ +  G    I V   +  + ER+  + +   +P WSP GR L+FS  + G     LY
Sbjct: 500 AYSAWRDGGWRDIYVHDLETQTTERITADRAQDNSPEWSPDGRWLLFSSDRSGVF--NLY 557

Query: 420 SIDL-NGRNETLINTPAYASDP 440
           + D  +G+   + N    A +P
Sbjct: 558 AFDTESGQTRQVSNVLGGAFEP 579


>gi|257055979|ref|YP_003133811.1| periplasmic component of the Tol biopolymer transport system
           [Saccharomonospora viridis DSM 43017]
 gi|256585851|gb|ACU96984.1| periplasmic component of the Tol biopolymer transport system
           [Saccharomonospora viridis DSM 43017]
          Length = 1059

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 135/336 (40%), Gaps = 53/336 (15%)

Query: 108 AQVLVTGRVIKEGKD------------RLRV----EFRLWDVKD--RKQIIGKKFFSSP- 148
           A ++V GRV+ EG+D            RL        R+ D+ +   + +  +  F  P 
Sbjct: 248 ADLVVDGRVVTEGEDVFLFAAEWLDDHRLLYTADGALRIRDLAEGTTRDVPFEATFELPR 307

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
             +R+  H   D     + G      + +L      V+ +  N L +M  DG   R LT 
Sbjct: 308 VDYRRKEHDFDDRSRHRVRG----ILTPVLSPDARQVAFVALNDLWLMPLDG-TPRRLTH 362

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            R      P FSP+ + +AYA  D      +Y+ D R  R  +R+       ++P FS +
Sbjct: 363 DR-FAESNPVFSPDGRYLAYAA-DRAGTPDLYVRDLRTGRE-RRVTALDGAEVSPAFSPD 419

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------- 321
           G++      +D+    Y +DL++    +L   LF     S+S D   + F +        
Sbjct: 420 GRKLAF---QDQDGATYVLDLRTGRVRQLVPPLFGPGRPSWSADGKTLAFVAVKPYSARF 476

Query: 322 REGKEQLYVM---------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           REG  Q+  +          + G +   IS   +     PVWSP G  +AF   S     
Sbjct: 477 REGTSQILTVDVVTGKQTYHAPGGEHASISTRGDDG---PVWSPDGRQVAFVVDS--TLR 531

Query: 373 IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIF 406
           I  +  DG+      E +     AP+WS  GR L++
Sbjct: 532 IMPVAADGTPRGPARELNGEVADAPSWSGDGRRLLY 567



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 8/119 (6%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +LT   F +    +S D + I F SDR G   ++ +     +  R + D    +  P W 
Sbjct: 132 QLTRGGFDDREPRWSFDGTTIAFSSDRGGSYDIWTVDVATGELIRRTDDPGQEHT-PAWH 190

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKD 411
           P G  + +    G    I  +  DG+   L+    ++  L AP+WSP G  L + R +D
Sbjct: 191 PDGRSLVYVADEG----IAAVAADGTTRTLVPSPGDEVALHAPSWSPDGGRLAYVRHED 245



 Score = 43.1 bits (100), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 5/105 (4%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           PR+S +G     S  +  + DI++VD+ +    R T+      + ++ PD   +V+ +D 
Sbjct: 143 PRWSFDGTTIAFSSDRGGSYDIWTVDVATGELIRRTDDPGQEHTPAWHPDGRSLVYVAD- 201

Query: 323 EGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKF 366
              E +  + ++G+ +  + S   E +   P WSP G  +A+ + 
Sbjct: 202 ---EGIAAVAADGTTRTLVPSPGDEVALHAPSWSPDGGRLAYVRH 243


>gi|209549595|ref|YP_002281512.1| hypothetical protein Rleg2_2002 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535351|gb|ACI55286.1| WD40 domain protein beta Propeller [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 276

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 13/156 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G +      +++  DIY++ +   A  RLT+    N    YS D   I F S R G
Sbjct: 116 WSPDGCQLAYCGIRNDLFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYFNSSRTG 175

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVM 376
             Q++ +  +GS  ++++ D + ++F    SP  D +    +    F         + +M
Sbjct: 176 LMQIWRIHPDGSGLEQVTSDNQGNWFAHP-SPSNDKVLILSYDPSVFDHPRDLDVRLRLM 234

Query: 377 KKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
             DG   + L E       +  P WSP G    + R
Sbjct: 235 DMDGGNLKTLFELFGGQGTINVPCWSPDGEEFAYVR 270



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 11/178 (6%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V + + R  RA + +     ++ AP FS +G   L++    + + ++ + L      ++ 
Sbjct: 5   VEIYNVRTGRA-REVWQTDKLVEAPNFSPDGCYLLLN---GDGL-LWRLPLDGGEVVKVD 59

Query: 299 NTLFINISASY--SPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
               +N +  +  SPD ++IV     E GK  +YV+   G   + +++++ + +    WS
Sbjct: 60  TGFAVNCNNDHGISPDGTEIVISDKTEFGKSTIYVLPIEGGTPRLVTENQPSYWHG--WS 117

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           P G  +A+     + F I  +  DG  E RL   +     P +S  G+ + F+  + G
Sbjct: 118 PDGCQLAYCGIRNDLFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYFNSSRTG 175



 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 38/187 (20%), Positives = 85/187 (45%), Gaps = 14/187 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K+++ V+  +G   R +T   +Q  +   +SP+  ++AY    + D+  +Y +      A
Sbjct: 89  KSTIYVLPIEGGTPRLVT--ENQPSYWHGWSPDGCQLAYCGIRN-DLFDIYTISVD-GGA 144

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             R+ +       P +S++G+    +  +   M I+ +    +  E++T+    N  A  
Sbjct: 145 ETRLTHGEGRNDGPDYSADGQWIYFNSSRTGLMQIWRIHPDGSGLEQVTSDNQGNWFAHP 204

Query: 310 SPDSSQI--------VFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGD 359
           SP + ++        VF+  R+   +L +M  +G + K + +    + +   P WSP G+
Sbjct: 205 SPSNDKVLILSYDPSVFDHPRDLDVRLRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGE 264

Query: 360 LIAFTKF 366
             A+ ++
Sbjct: 265 EFAYVRY 271


>gi|300786706|ref|YP_003766997.1| TolB-related protein [Amycolatopsis mediterranei U32]
 gi|299796220|gb|ADJ46595.1| TolB-related protein [Amycolatopsis mediterranei U32]
          Length = 1342

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 4/168 (2%)

Query: 247 DRAPK--RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           D AP   ++ N  ++ L P  S +G+    + ++  +  ++ + +      ++T+    +
Sbjct: 106 DGAPTALQLTNDDAVDLHPALSPDGRTVAFASERTGSRKLFVIGVDGRGLRQVTSGPATD 165

Query: 305 ISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            S S+SPD +++ F S R+     +Y +  +G    R++ D  A    P W P       
Sbjct: 166 DSPSWSPDGTRLAFSSTRDDPAGDIYTVGVDGGTPARLTTDPAADT-QPAWGPARIAFTT 224

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           T+F      + + +  G+  R + +  +   P WSP GR    +R KD
Sbjct: 225 TRFHPAGDVVLMAEAGGAVTRAVPDPGDSSEPAWSPDGRLAFTTRAKD 272



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 56/243 (23%), Positives = 103/243 (42%), Gaps = 14/243 (5%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID-RAPKRIGNF 256
           RDGA       + D +   P  SP+ + VA+A+   E      L    +D R  +++ + 
Sbjct: 105 RDGAPTALQLTNDDAVDLHPALSPDGRTVAFAS---ERTGSRKLFVIGVDGRGLRQVTSG 161

Query: 257 RSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +   +P +S +G R A  S + D A DIY+V +      RLT     +   ++ P  ++
Sbjct: 162 PATDDSPSWSPDGTRLAFSSTRDDPAGDIYTVGVDGGTPARLTTDPAADTQPAWGP--AR 219

Query: 316 IVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           I F + R     + + + ++ G+  + +    ++S  +P WSP G L   T+       +
Sbjct: 220 IAFTTTRFHPAGDVVLMAEAGGAVTRAVPDPGDSS--EPAWSPDGRLAFTTRAKDPSGDV 277

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLIN 432
             +  +   +   ++D     PT+   GR +    +  G T   ++S D   G    L N
Sbjct: 278 RQIVGETVTDISALKDIGETEPTFRSDGRPVFTELRASGTT--DIWSADAAGGDRRDLTN 335

Query: 433 TPA 435
            P 
Sbjct: 336 RPG 338



 Score = 47.4 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 6/86 (6%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAF 363
           SA  SPD + +VF++DR    QL V  ++G   + + Q  D+  S  DP WSP G L+A+
Sbjct: 902 SADVSPDGAALVFQNDRS---QLCVAPADGGRARVLVQSGDEGESLNDPAWSPDGTLVAY 958

Query: 364 -TKFSGEKFAIGVMKKDGSQERLLVE 388
            + FS    +I ++   G   R L++
Sbjct: 959 DSAFSESVPSILIVPSAGGTPRPLID 984



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 12/127 (9%)

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEK--FAIGVMK 377
           +R+G  +L+ ++       +++ D +A    P  SP G  +AF ++ +G +  F IGV  
Sbjct: 96  ERDG--ELWFLRDGAPTALQLTND-DAVDLHPALSPDGRTVAFASERTGSRKLFVIGV-- 150

Query: 378 KDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PA 435
            DG   R +    +   +P+WSP G  L FS  +D D    +Y++ ++G     + T PA
Sbjct: 151 -DGRGLRQVTSGPATDDSPSWSPDGTRLAFSSTRD-DPAGDIYTVGVDGGTPARLTTDPA 208

Query: 436 YASDPQW 442
             + P W
Sbjct: 209 ADTQPAW 215



 Score = 44.7 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 63/292 (21%), Positives = 111/292 (38%), Gaps = 59/292 (20%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDE 234
           + F SE   S      L V+  DG  +R +T  P+ D     P +SP+  ++A+++  D+
Sbjct: 133 VAFASERTGS----RKLFVIGVDGRGLRQVTSGPATDD---SPSWSPDGTRLAFSSTRDD 185

Query: 235 DILRVYLM----------------DTRIDRAPKRI----------GNFRSMILA------ 262
               +Y +                DT+    P RI          G+   M  A      
Sbjct: 186 PAGDIYTVGVDGGTPARLTTDPAADTQPAWGPARIAFTTTRFHPAGDVVLMAEAGGAVTR 245

Query: 263 ----------PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                     P +S +G+ A  +  KD + D+  + +    T+            ++  D
Sbjct: 246 AVPDPGDSSEPAWSPDGRLAFTTRAKDPSGDVRQI-VGETVTDISALKDIGETEPTFRSD 304

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKF 371
              +  E    G   ++   + G D++ ++    A  FDP +S  G  +A+T+   G+  
Sbjct: 305 GRPVFTELRASGTTDIWSADAAGGDRRDLTNRPGADEFDPAFSADGSQLAYTQGGRGDSV 364

Query: 372 A--IGVMKKDGSQERLLVEDSN----LQAPTWSPSGRSLIFSRKKDGDTGSK 417
           A  I V   DGS  R L   ++     + P WSP   ++ F+    G   S+
Sbjct: 365 ATEIIVANADGSGPRPLTGPTDGTKRERHPAWSPDATAIAFTVTVGGGESSR 416


>gi|294495630|ref|YP_003542123.1| Periplasmic component of the Tol biopolymer transport system
           [Methanohalophilus mahii DSM 5219]
 gi|292666629|gb|ADE36478.1| Periplasmic component of the Tol biopolymer transport system
           [Methanohalophilus mahii DSM 5219]
          Length = 360

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 26/214 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-----ATYDDEDILRVYLMDTRI 246
           +L  M+ DG+NI  LT   D+    P  SP+   +AY       YD      +++MD  I
Sbjct: 110 NLFKMNVDGSNITQLTDGADR--RSPSISPDGSMLAYLSNIAGNYD------IWVMD--I 159

Query: 247 DRAPKRIGNFRSMILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                R   F S     P +S +G   + S + +    ++  D++ + + +LT+    ++
Sbjct: 160 TNKSHRQLTFTSEDEGKPSWSPDGDEVIYSFKDN----LWLTDVEFDKSRQLTHGTSNDV 215

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              + P   +IVF SDR G+  L+++ +   +++ ++ D++  Y  P   P G  I F  
Sbjct: 216 DPFFLPSGEKIVFISDRGGETNLWLIDTEDDERQLLTDDRKVEY-SPAAGPDGKKIVFGA 274

Query: 366 FSGEKFAIGVMKKDGSQER-----LLVEDSNLQA 394
            + E F + +++ +  +       + VED+N++A
Sbjct: 275 RANETFDLWMLEMENPEANDGFSDINVEDTNVEA 308



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 18/227 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           ANI  LT         P +SP+  ++ Y   +D+    +++MD      P  I +     
Sbjct: 29  ANIYPLTDDFSSDYHYPAWSPDGTQITYM--NDK---AIWIMDAD-GSNPHVIYDGMKWD 82

Query: 261 LAPRFSSNGKRALISVQKDEA-----MDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             P FS++GK    + +  +      ++++ +++  +   +LT+      S S SPD S 
Sbjct: 83  GDPCFSADGKDIYFASESRKPYSSTYLNLFKMNVDGSNITQLTDGA-DRRSPSISPDGSM 141

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + + S+  G   ++VM       ++++   E     P WSP GD + ++    +   +  
Sbjct: 142 LAYLSNIAGNYDIWVMDITNKSHRQLTFTSEDEG-KPSWSPDGDEVIYS--FKDNLWLTD 198

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           ++ D S++ L    SN   P + PSG  ++F   + G+T   L+ ID
Sbjct: 199 VEFDKSRQ-LTHGTSNDVDPFFLPSGEKIVFISDRGGET--NLWLID 242



 Score = 37.0 bits (84), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSP 399
           ++ D  + Y  P WSP G  I +        AI +M  DGS   ++ +       P +S 
Sbjct: 34  LTDDFSSDYHYPAWSPDGTQITYMN----DKAIWIMDADGSNPHVIYDGMKWDGDPCFSA 89

Query: 400 SGRSLIF---SRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            G+ + F   SRK    T   L+ ++++G N T +   A
Sbjct: 90  DGKDIYFASESRKPYSSTYLNLFKMNVDGSNITQLTDGA 128


>gi|126650236|ref|ZP_01722464.1| YuxL [Bacillus sp. B14905]
 gi|126592886|gb|EAZ86868.1| YuxL [Bacillus sp. B14905]
          Length = 662

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 8/149 (5%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNATE 295
           M T+    P+ + + +S +  P+ S +G   +         +KD   +++ ++L+    +
Sbjct: 1   MTTKQGIQPEDLYHLKS-VADPQLSPDGTEVVYVETRIDEKKKDYVSNLFYLNLKDKRPQ 59

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           + T       S  +SPD SQI F S R GK Q++V+   G + K+++  K  +   PVWS
Sbjct: 60  QWTYGDDRTSSPVWSPDGSQIAFSSTRSGKPQIFVLSKTGGEAKQVTYCKNGAS-TPVWS 118

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           P G+ IAF+   G+   I    +D  +E 
Sbjct: 119 PCGEKIAFSVMLGKDETILDKAEDDKKEE 147



 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 12/107 (11%)

Query: 310 SPDSSQIVFESDR-EGKEQLYV-------MQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           SPD +++V+   R + K++ YV       ++     Q     D+ +S   PVWSP G  I
Sbjct: 24  SPDGTEVVYVETRIDEKKKDYVSNLFYLNLKDKRPQQWTYGDDRTSS---PVWSPDGSQI 80

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFS 407
           AF+     K  I V+ K G + + +    N    P WSP G  + FS
Sbjct: 81  AFSSTRSGKPQIFVLSKTGGEAKQVTYCKNGASTPVWSPCGEKIAFS 127


>gi|18395019|ref|NP_564147.1| unknown protein [Arabidopsis thaliana]
 gi|5263319|gb|AAD41421.1|AC007727_10 ESTs gb|N96028, gb|F14286, gb|T20680, gb|F14443, gb|AA657300 and
           gb|N65244 come from this gene [Arabidopsis thaliana]
 gi|15028243|gb|AAK76710.1| unknown protein [Arabidopsis thaliana]
 gi|23297034|gb|AAN13226.1| unknown protein [Arabidopsis thaliana]
 gi|332192017|gb|AEE30138.1| DPP6 N-terminal domain-like protein [Arabidopsis thaliana]
          Length = 706

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 95/402 (23%), Positives = 158/402 (39%), Gaps = 88/402 (21%)

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
           Q++T P  +  F    S      V     + G D   VE  L+D+K R + I      +P
Sbjct: 306 QRVT-PPGVHAFTPATSPNNHEFVAVATRRPGSDYRHVE--LFDLK-RNEFIELTRLVAP 361

Query: 149 ASWRKIAHTISDDI----YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            S   +   +S D     Y S  G+     S +LF+                     NI+
Sbjct: 362 KS-HHLNPFLSPDSSRVGYHSCRGDANGRRSPLLFLE--------------------NIQ 400

Query: 205 YLTPSRDQILFE-----PRFSPNQQKVAYATY-----------DDEDILRVYLMDTRIDR 248
             T +RD  LF      P FSP   ++AY                 ++ +     T  D 
Sbjct: 401 --TTTRDLSLFRIDGSFPSFSPGGDRIAYVKMPGVFVVKPDGSGQREVYKGMAFSTAWD- 457

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL----QSNATERLTNTLFIN 304
            P R G          +SS+G     + ++ E +D+ S+D+    +S++  RLT     N
Sbjct: 458 -PVRPGIV--------YSSSGP--TFATERTE-VDVISIDVDAADKSSSVRRLTTNGKNN 505

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIA 362
                SPD  +IVF S R G + LY+M +   +   + +  E ++ D +  WSP G+ IA
Sbjct: 506 AFPWPSPDGKRIVFRSGRTGHKNLYIMDAEKGESGGLWRLTEGAWTDTMCNWSPDGEWIA 565

Query: 363 F-----TKFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDT 414
           F     +  SG  F + ++  +G+  R L++         P +SP  +SL+F+    G +
Sbjct: 566 FASDRESPGSG-SFELFLIHPNGTGLRKLIQSGTGGRTNHPIFSPDSKSLVFTSDYAGIS 624

Query: 415 GSK------------LYSIDLNGRNETLINTPAYA-SDPQWV 443
                          ++++ L+G N   +   +Y    P W 
Sbjct: 625 AEPISNPHHYQPYGDIFTVKLDGSNVRRLTHNSYEDGTPAWA 666


>gi|160889635|ref|ZP_02070638.1| hypothetical protein BACUNI_02061 [Bacteroides uniformis ATCC 8492]
 gi|270293977|ref|ZP_06200179.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317479170|ref|ZP_07938307.1| hypothetical protein HMPREF1007_01423 [Bacteroides sp. 4_1_36]
 gi|156860627|gb|EDO54058.1| hypothetical protein BACUNI_02061 [Bacteroides uniformis ATCC 8492]
 gi|270275444|gb|EFA21304.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316904658|gb|EFV26475.1| hypothetical protein HMPREF1007_01423 [Bacteroides sp. 4_1_36]
          Length = 369

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 20/183 (10%)

Query: 244 TRIDRAPKRIGNFRSMI-LAPRF----SSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +RI   P   G  R +  +AP +    S +GK      +++   D+Y++  +     RLT
Sbjct: 181 SRIYTLPITGGTPRLITPMAPSYLHGWSPDGKELAYCAERNGNYDVYTIPAEGGEETRLT 240

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               ++    YSP    I F S R G  Q++ M+++GS+Q +++ D+  + + P  SP G
Sbjct: 241 TAEGLDDGPEYSPCGQYIWFNSVRTGLMQVWRMKADGSEQTQMTFDETRNSWFPHISPDG 300

Query: 359 DLIAFTKF------SGEKFA-----IGVMKKDGSQERLLVE----DSNLQAPTWSPSGRS 403
             + F  +       GE  A     + +M  +G + + L++       +   +W+P  + 
Sbjct: 301 KSVVFITYYKGDLEPGEHLANKNVELRLMPANGGEPKTLLKLFGGQGTINVNSWAPDSKR 360

Query: 404 LIF 406
           + F
Sbjct: 361 IAF 363



 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 9/181 (4%)

Query: 265 FSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            S++G++  IS   ++D    IY++ + +  T RL   +  +    +SPD  ++ + ++R
Sbjct: 162 LSTDGQQIAISHGTKEDYKSRIYTLPI-TGGTPRLITPMAPSYLHGWSPDGKELAYCAER 220

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G   +Y + + G ++ R++   E     P +SP G  I F         +  MK DGS+
Sbjct: 221 NGNYDVYTIPAEGGEETRLTT-AEGLDDGPEYSPCGQYIWFNSVRTGLMQVWRMKADGSE 279

Query: 383 ERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           +  +   E  N   P  SP G+S++F     GD     +   L  +N  L   PA   +P
Sbjct: 280 QTQMTFDETRNSWFPHISPDGKSVVFITYYKGDLEPGEH---LANKNVELRLMPANGGEP 336

Query: 441 Q 441
           +
Sbjct: 337 K 337


>gi|114561197|ref|YP_748710.1| amidohydrolase [Shewanella frigidimarina NCIMB 400]
 gi|114332490|gb|ABI69872.1| amidohydrolase [Shewanella frigidimarina NCIMB 400]
          Length = 1060

 Score = 58.2 bits (139), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 9/135 (6%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +     + L   +   +   YSPD   I F SD +G + +++M ++G++   I+
Sbjct: 73  DIYQIPIAGGEAKPLAQGIAWQMQPVYSPDGKYIAFTSDEDGGDNIWIMNADGTNPHAIT 132

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFSGEK----FAIGVMKKDGSQERLLVEDSN----LQ 393
            +       P WSP    L+A   F+G +      + +    G +   L E  N    L 
Sbjct: 133 TETFRLLNSPAWSPDSQYLVARKHFTGTRSLGAGEVWMFHVAGGEGVKLTERPNEQKDLG 192

Query: 394 APTWSPSGRSLIFSR 408
            P +SP GR + FS+
Sbjct: 193 EPAYSPDGRYIYFSQ 207



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 18/155 (11%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTK 365
           A  SPD  ++VFE+      +++V        KR+++ D + +   P WS  G  I FT 
Sbjct: 369 AQVSPDGEKVVFEA----LGKIWVRDIKDGKHKRLTRLDDDINELFPQWSRDGKDIVFTT 424

Query: 366 FSGEK-FAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK------ 417
           ++ ++   + V+   G + ++L  E      PT+SP G  +++ + + G    +      
Sbjct: 425 WNDQQQGTVSVVSARGGKAKVLTNEPGKYVEPTFSPDGEYIVYRKARGGYMTPRTWSQEP 484

Query: 418 -LYSIDLNGRNETLI----NTPAYASDPQWVGFMD 447
            LY +D+ G+  T +    + P + +D   V FMD
Sbjct: 485 GLYKVDIKGKQSTKLTASGHQPQFGNDSDRVYFMD 519



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 119/282 (42%), Gaps = 59/282 (20%)

Query: 208 PSRDQILFEPRFSPNQQKVAYA---------TYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           P+  + L EP +SP+ + + ++          Y  + +  +Y    +I R   + G+   
Sbjct: 185 PNEQKDLGEPAYSPDGRYIYFSQDSTPGKTFHYSKDSVKGIY----KIKRYDTQTGDIEV 240

Query: 259 MI------LAPRFSSNGKRALISVQKDEAMD-IYSVDLQSNATERLTNTL---------- 301
           +I      + P  S +GK  L  +++D     +Y++DL+S    +L + L          
Sbjct: 241 LIEGTGGAIRPTPSPDGK-TLAYIKRDGFQSTLYTLDLKSGEETKLYDKLDRDMQETWAI 299

Query: 302 -FINISASYSPDSSQIVFESDREGK--------EQLYVMQSNGSDQK------RISQDKE 346
             +  + S++ D+  IVF +  +GK        +Q+  +  + S Q+      R +Q+ +
Sbjct: 300 HGVYPTMSWTKDNKHIVFWA--KGKINKLDVDSKQVTDIPFSVSTQRDIQPSVRFTQNLD 357

Query: 347 ASYFD------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWS 398
              FD         SP G+ + F    G+ +   +  KDG  +RL  L +D N   P WS
Sbjct: 358 KDEFDVKMLRMAQVSPDGEKVVFEAL-GKIWVRDI--KDGKHKRLTRLDDDINELFPQWS 414

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             G+ ++F+   D   G+        G+ + L N P    +P
Sbjct: 415 RDGKDIVFTTWNDQQQGTVSVVSARGGKAKVLTNEPGKYVEP 456


>gi|327190629|gb|EGE57717.1| putative periplasmic component of the Tol biopolymer transport
           system protein [Rhizobium etli CNPAF512]
          Length = 276

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G++      +D+  DIY++ +      RLT+    N    YS D   I F S R G
Sbjct: 116 WSPDGRQLAYCGIRDDLFDIYTISVDGGIETRLTHGEGRNDGPDYSADGQWIYFNSSRTG 175

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVM 376
             Q++ +  +G+  ++++ D + ++F    SP+ D +    +    F         + +M
Sbjct: 176 LMQIWRIHPDGTGLEQVTSDNQGNWFAHP-SPKNDKVLILSYDPSVFDHPRDLDVRLRLM 234

Query: 377 KKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
             DG   + L E       +  P WSP G    + R
Sbjct: 235 DMDGGNLKTLFELFGGQGTINVPCWSPDGDEFAYVR 270



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 97/223 (43%), Gaps = 33/223 (14%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H IS D  + +  +K +F                K+S+ ++  +G   R +T   +Q  +
Sbjct: 70  HGISPDGTEIVISDKSEFG---------------KSSIYILPIEGGTPRLVT--ENQPSY 112

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLM--DTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
              +SP+ +++AY    D D+  +Y +  D  I+    R+ +       P +S++G+   
Sbjct: 113 WHGWSPDGRQLAYCGIRD-DLFDIYTISVDGGIE---TRLTHGEGRNDGPDYSADGQWIY 168

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--------VFESDREGK 325
            +  +   M I+ +       E++T+    N  A  SP + ++        VF+  R+  
Sbjct: 169 FNSSRTGLMQIWRIHPDGTGLEQVTSDNQGNWFAHPSPKNDKVLILSYDPSVFDHPRDLD 228

Query: 326 EQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKF 366
            +L +M  +G + K + +    + +   P WSP GD  A+ ++
Sbjct: 229 VRLRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGDEFAYVRY 271



 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 10/99 (10%)

Query: 355 SPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           SP G  I  + K    K +I ++  +G   RL+ E+       WSP GR L +   +  D
Sbjct: 73  SPDGTEIVISDKSEFGKSSIYILPIEGGTPRLVTENQPSYWHGWSPDGRQLAYCGIR--D 130

Query: 414 TGSKLYSIDLNGRNETLI-------NTPAYASDPQWVGF 445
               +Y+I ++G  ET +       + P Y++D QW+ F
Sbjct: 131 DLFDIYTISVDGGIETRLTHGEGRNDGPDYSADGQWIYF 169


>gi|284040960|ref|YP_003390890.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
 gi|283820253|gb|ADB42091.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
          Length = 667

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/269 (24%), Positives = 117/269 (43%), Gaps = 49/269 (18%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-------YA 229
           I FVS     G  K  + +MDR G   + LT  +   L E  +SP+ +K+A       YA
Sbjct: 105 ISFVSAR--QGATKGQIWLMDRRGGEAKKLTDLKTD-LEEYVWSPDGKKIAMVLRDPDYA 161

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                 + + Y++D                     F ++ K  L    +  ++ +Y  D+
Sbjct: 162 DSAKTKVRKPYVLDRY------------------HFKADVKGYL----EKGSVHLYVYDV 199

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFES------DREGKEQLYVMQS-NGSDQKRIS 342
            S   + LT   +   S ++SPD SQ+ F S      DR     +YV+ +  G+  K+++
Sbjct: 200 ASKKLDTLTTGNYDETSPTWSPDGSQLAFVSNRTEDPDRNQNTDIYVIDAKKGATMKQLT 259

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSG-------EKFAIGVMKKDGSQERLLVE--DSNLQ 393
                S  +P WSP G  IA+T+ +        ++  + V+ +DG +  LL +  D  ++
Sbjct: 260 T-WPGSDNNPEWSPDGKRIAYTRSTASGNFLMYDQPVLAVISRDGGEPTLLSKALDRPVR 318

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            P W+  G+++    + D  T    Y++D
Sbjct: 319 NPRWAKDGQTIGVLVQDDRQTYVGQYTLD 347



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 47/226 (20%)

Query: 263 PRFSSNGK-----RALISVQKDEA-MDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P+ S +GK      + +   KD+   D++ V      T +LTNT      A +SPD   I
Sbjct: 46  PQISPDGKWVTYGLSTVDTTKDKRNSDLWMVSWDGKETVQLTNTPEGESRARFSPDGKYI 105

Query: 317 VFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------- 363
            F S R+G  K Q+++M   G + K+++ D +    + VWSP G  IA            
Sbjct: 106 SFVSARQGATKGQIWLMDRRGGEAKKLT-DLKTDLEEYVWSPDGKKIAMVLRDPDYADSA 164

Query: 364 ------------------TKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGR 402
                              K   EK ++ +   D + ++   L   + +  +PTWSP G 
Sbjct: 165 KTKVRKPYVLDRYHFKADVKGYLEKGSVHLYVYDVASKKLDTLTTGNYDETSPTWSPDGS 224

Query: 403 SLIF--SRKKDGD--TGSKLYSIDL--NGRNETLINTPAYASDPQW 442
            L F  +R +D D    + +Y ID       + L   P   ++P+W
Sbjct: 225 QLAFVSNRTEDPDRNQNTDIYVIDAKKGATMKQLTTWPGSDNNPEW 270


>gi|83816740|ref|YP_444453.1| hypothetical protein SRU_0307 [Salinibacter ruber DSM 13855]
 gi|83758134|gb|ABC46247.1| hypothetical protein SRU_0307 [Salinibacter ruber DSM 13855]
          Length = 995

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 15/164 (9%)

Query: 261 LAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSN----------ATERLTNTLFINISASY 309
           +AP  S +G+  A IS ++  + ++Y  D ++            T       FI+ S ++
Sbjct: 234 IAPSLSPDGRYVAFISERELFSFNLYVADAETGEVIAELDRAGTTGHFNALRFISSSGTW 293

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD  ++ F S  +G  Q+ V      + +R  S D   S  +P WSP G  +AF    G
Sbjct: 294 SPDGRRLAFVSSEDGDNQITVWNVVDEEIERSFSVDGVTSMKNPAWSPDGTRLAFAGTDG 353

Query: 369 EKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
               + V+  +    R L  D  ++LQ PTW+P G ++ F+  +
Sbjct: 354 GISDLYVLNLETESVRQLTNDRYADLQ-PTWAPDGETIAFATDR 396



 Score = 45.1 bits (105), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 30/252 (11%)

Query: 199 DGANIRYLTPSRD--QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR-------IDRA 249
           D A    L P  +  +I   P  SP+ + VA+ +  +     +Y+ D         +DRA
Sbjct: 216 DSAGQTVLAPETNGGRINIAPSLSPDGRYVAFISERELFSFNLYVADAETGEVIAELDRA 275

Query: 250 PKRIGNFRSMIL---APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI- 305
               G+F ++     +  +S +G+R      +D    I   ++     ER  +   +   
Sbjct: 276 -GTTGHFNALRFISSSGTWSPDGRRLAFVSSEDGDNQITVWNVVDEEIERSFSVDGVTSM 334

Query: 306 -SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + ++SPD +++ F     G   LYV+       ++++ D+ A    P W+P G+ IAF 
Sbjct: 335 KNPAWSPDGTRLAFAGTDGGISDLYVLNLETESVRQLTNDRYAD-LQPTWAPDGETIAFA 393

Query: 365 KFSGE----------KFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
               E             +G++     +   R    D+    P ++P G+SL F   +DG
Sbjct: 394 TDRAETNLETLSPSSNMDLGLVDVSSGEVTVRAPFGDALHHNPQFAPDGQSLYFISDQDG 453

Query: 413 DTGSKLYSIDLN 424
                +Y +DL+
Sbjct: 454 F--KDVYRMDLS 463



 Score = 40.4 bits (93), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 65/160 (40%), Gaps = 16/160 (10%)

Query: 298 TNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQS-NGSDQKRISQDKEASYFDPV-- 353
           TN   INI+ S SPD   + F S+RE     LYV  +  G     + +     +F+ +  
Sbjct: 227 TNGGRINIAPSLSPDGRYVAFISERELFSFNLYVADAETGEVIAELDRAGTTGHFNALRF 286

Query: 354 ------WSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVED--SNLQAPTWSPSGRSL 404
                 WSP G  +AF         I V    D   ER    D  ++++ P WSP G  L
Sbjct: 287 ISSSGTWSPDGRRLAFVSSEDGDNQITVWNVVDEEIERSFSVDGVTSMKNPAWSPDGTRL 346

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQWV 443
            F+    G   S LY ++L   +   +    YA   P W 
Sbjct: 347 AFAGTDGGI--SDLYVLNLETESVRQLTNDRYADLQPTWA 384



 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 68/140 (48%), Gaps = 13/140 (9%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +SP+  ++A+A  D   I  +Y+++   +   +++ N R   L P ++ +G+    + 
Sbjct: 337 PAWSPDGTRLAFAGTDG-GISDLYVLNLETESV-RQLTNDRYADLQPTWAPDGETIAFAT 394

Query: 277 QKDEA----------MDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            + E           MD+  VD+ S   T R      ++ +  ++PD   + F SD++G 
Sbjct: 395 DRAETNLETLSPSSNMDLGLVDVSSGEVTVRAPFGDALHHNPQFAPDGQSLYFISDQDGF 454

Query: 326 EQLYVMQSNGSDQKRISQDK 345
           + +Y M  +  D+ R+++ K
Sbjct: 455 KDVYRMDLSSGDRFRVTRLK 474


>gi|255348980|ref|ZP_05380987.1| translocation protein TolB [Chlamydia trachomatis 70]
 gi|255503519|ref|ZP_05381909.1| translocation protein TolB [Chlamydia trachomatis 70s]
 gi|255507197|ref|ZP_05382836.1| translocation protein TolB [Chlamydia trachomatis D(s)2923]
 gi|289525641|emb|CBJ15122.1| outer membrane component of membrane transport system [Chlamydia
           trachomatis Sweden2]
 gi|296435205|gb|ADH17383.1| translocation protein TolB [Chlamydia trachomatis E/150]
 gi|296438924|gb|ADH21077.1| translocation protein TolB [Chlamydia trachomatis E/11023]
          Length = 431

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 11/284 (3%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF--VSESVVSGIIKN 191
           K  ++I   +    P+   +  H  +D I+  +T   G  + +I+F   + +  + + + 
Sbjct: 103 KGSQKIFSLELSGDPSKDHQAIHEAADRIHFLLTRVPGISSGKIIFSLCATNSSTELKQG 162

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +D DG ++  LT +   +   P +       AY     +  +    ++T    A K
Sbjct: 163 ELWSVDYDGQHLYPLT-NEHSLSVTPTWMHISHIPAYMYVSYKLGVPKIFLNTLNQPAGK 221

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNA---TERLTNTLF-INI 305
           +I   +     P FS   K       +D   D++  S  L + A    ++L N  F    
Sbjct: 222 KILAMQGNQFMPTFSPKTKLLAFISDRDGNPDLFVQSFSLATGAIGTPKKLLNEAFGTQG 281

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           + S+SPD +++VF S+++G  ++Y MQ S      R+   K  +   P WSP G  IAF 
Sbjct: 282 NPSFSPDGTRLVFVSNKDGTPRIYQMQISPEQHSPRLLIKKYRNSSCPTWSPDGKKIAFC 341

Query: 365 KFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                   I V     G  E+L     + ++P+W+     L++S
Sbjct: 342 SVIKGVRQICVYDLASGRDEQLTTSTEHKESPSWAADSNHLVYS 385



 Score = 38.1 bits (87), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 27/178 (15%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSS--QIVFESDREGKEQLYVMQSNGSDQKR 340
           +++SVD        LTN   ++++ ++   S     ++ S + G  ++++   N    K+
Sbjct: 163 ELWSVDYDGQHLYPLTNEHSLSVTPTWMHISHIPAYMYVSYKLGVPKIFLNTLNQPAGKK 222

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTK------------FSGEKFAIGVMKKDGSQERLLVE 388
           I    + + F P +SP+  L+AF              FS    AIG  KK      LL E
Sbjct: 223 I-LAMQGNQFMPTFSPKTKLLAFISDRDGNPDLFVQSFSLATGAIGTPKK------LLNE 275

Query: 389 DSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET---LINTPAYASDPQW 442
               Q  P++SP G  L+F   KDG    ++Y + ++    +   LI     +S P W
Sbjct: 276 AFGTQGNPSFSPDGTRLVFVSNKDGT--PRIYQMQISPEQHSPRLLIKKYRNSSCPTW 331


>gi|82621714|gb|ABB86530.1| putative aminopeptidase [uncultured Bacteroidetes bacterium
           'SBI2-18 P41A3']
          Length = 354

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 29/195 (14%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++ DI+  DL  N   +LT+    +  A+ SP   +IVF S R G   LY M  +G++ K
Sbjct: 139 DSFDIFISDLDGNIINQLTDEKGYDAEATVSPLGDKIVFTSTRNGDIDLYTMNIDGANVK 198

Query: 340 RISQD---KEASYFDPVWS--------PQG--------DLIAFTKFSGEKFAIGVMKKDG 380
           +I+ D      ++F P  S        P+         DL+        +  + +   DG
Sbjct: 199 QITFDLGYDGGAFFSPDGSKIIFRSSRPKSEEQIKEYQDLLDQGLVQPTEMELYICDSDG 258

Query: 381 SQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTG--SKLYSIDLNGRN-------ETL 430
              R L +  N   +P + PSG  ++FS   + + G    LY IDL+G+N       ET 
Sbjct: 259 KNLRQLTDLGNANWSPVFHPSGEKILFSSNFESERGFPFNLYMIDLDGKNLTRVTHSETF 318

Query: 431 INTPAYASDPQWVGF 445
              P ++ D + + F
Sbjct: 319 DAFPVFSRDGKKLAF 333



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 32/224 (14%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           + K  +  YD  DI    L    I++     G      ++P     G + + +  ++  +
Sbjct: 130 EGKYVWPIYDSFDIFISDLDGNIINQLTDEKGYDAEATVSPL----GDKIVFTSTRNGDI 185

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE---------------- 326
           D+Y++++     +++T  L  +  A +SPD S+I+F S R   E                
Sbjct: 186 DLYTMNIDGANVKQITFDLGYDGGAFFSPDGSKIIFRSSRPKSEEQIKEYQDLLDQGLVQ 245

Query: 327 ----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEK---FAIGVMKK 378
               +LY+  S+G + ++++    A++  PV+ P G+ I F + F  E+   F + ++  
Sbjct: 246 PTEMELYICDSDGKNLRQLTDLGNANW-SPVFHPSGEKILFSSNFESERGFPFNLYMIDL 304

Query: 379 DGSQERLLVEDSNLQA-PTWSPSGRSLIFS--RKKDGDTGSKLY 419
           DG     +       A P +S  G+ L FS  R  +G   + L+
Sbjct: 305 DGKNLTRVTHSETFDAFPVFSRDGKKLAFSSNRNNNGTRETNLF 348


>gi|332704880|ref|ZP_08424968.1| WD40-like beta Propeller containing protein [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332555029|gb|EGJ52073.1| WD40-like beta Propeller containing protein [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 440

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 146/339 (43%), Gaps = 18/339 (5%)

Query: 111 LVTGRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITG 168
           L+T      G D +  V FR+++      + G+++    P     IA +    + + +TG
Sbjct: 110 LLTTSAWTPGADGKASVAFRVYETFTGTMLFGQEYADIKPVHMPDIADSFCSRLMEVLTG 169

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G F SR+ FV +   SG     + V    G N R +T S   +   P +S + +++ +
Sbjct: 170 RVGFFQSRLAFVRKD-QSG---KEIWVAGPTGYNARKIT-SLGGVNTSPAWSLDGKRLLF 224

Query: 229 A-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-ISVQKDEAMDIYS 286
                 + +L +  MDT   +     G   S +++P +  +G+ A+ + ++    + +  
Sbjct: 225 THVAKTQHMLGMADMDTGKVQTVDLPG---SSVISPTYMPDGRLAVTLDIEGQPNIYLLG 281

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D +   T  L  +  I++S S+     ++ F S R G   ++V+       +R++ + +
Sbjct: 282 RDWKPTGTP-LAKSWSIDVSPSFDRAGRKMAFVSGRLGNPHIFVLDIPTGKVQRVTYEGK 340

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLI 405
            +  +P  SP G+ +AF++ +     I V+      ER +       + P++ P G  + 
Sbjct: 341 YNT-NPTMSPDGNFVAFSRDTDVGHRIFVIDLRTGLERQVTFGPGFDEEPSFGPEGYFIA 399

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWV 443
           FS  + G    KLY    +G    ++ T    A  P W 
Sbjct: 400 FSSSRSGI--YKLYLTTRHGDEPVMLQTGSGEARAPSWT 436


>gi|294506198|ref|YP_003570256.1| hypothetical protein SRM_00383 [Salinibacter ruber M8]
 gi|294342526|emb|CBH23304.1| Conserved hypothetical protein [Salinibacter ruber M8]
          Length = 1072

 Score = 57.8 bits (138), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 15/164 (9%)

Query: 261 LAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSN----------ATERLTNTLFINISASY 309
           +AP  S +G+  A IS ++  + ++Y  D ++            T       FI+ S ++
Sbjct: 311 IAPSLSPDGRYVAFISERELFSFNLYVADAETGEVIAELDRAGTTGHFNALRFISSSGTW 370

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD  ++ F S  +G  Q+ V      + +R  S D   S  +P WSP G  +AF    G
Sbjct: 371 SPDGRRLAFVSSEDGDNQITVWNVVDEEIERSFSVDGVTSMKNPAWSPDGARLAFAGTDG 430

Query: 369 EKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
               + V+  +    R L  D  ++LQ PTW+P G ++ F+  +
Sbjct: 431 GISDLYVLNLETESVRQLTNDRYADLQ-PTWAPDGETIAFATDR 473



 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 56/252 (22%), Positives = 104/252 (41%), Gaps = 30/252 (11%)

Query: 199 DGANIRYLTPSRD--QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR-------IDRA 249
           D A    L P  +  +I   P  SP+ + VA+ +  +     +Y+ D         +DRA
Sbjct: 293 DSAGQTVLAPETNGGRINIAPSLSPDGRYVAFISERELFSFNLYVADAETGEVIAELDRA 352

Query: 250 PKRIGNFRSMIL---APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI- 305
               G+F ++     +  +S +G+R      +D    I   ++     ER  +   +   
Sbjct: 353 -GTTGHFNALRFISSSGTWSPDGRRLAFVSSEDGDNQITVWNVVDEEIERSFSVDGVTSM 411

Query: 306 -SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + ++SPD +++ F     G   LYV+       ++++ D+ A    P W+P G+ IAF 
Sbjct: 412 KNPAWSPDGARLAFAGTDGGISDLYVLNLETESVRQLTNDRYAD-LQPTWAPDGETIAFA 470

Query: 365 KFSGE----------KFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
               E             +G++     +   R    D+    P ++P G+SL F   +DG
Sbjct: 471 TDRAETNLETLSPSSNMDLGLVDVSSGEVTVRAPFGDALHHNPQFAPDGQSLYFISDQDG 530

Query: 413 DTGSKLYSIDLN 424
                +Y +DL+
Sbjct: 531 F--KDVYRMDLS 540



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 65/160 (40%), Gaps = 16/160 (10%)

Query: 298 TNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQS-NGSDQKRISQDKEASYFDPV-- 353
           TN   INI+ S SPD   + F S+RE     LYV  +  G     + +     +F+ +  
Sbjct: 304 TNGGRINIAPSLSPDGRYVAFISERELFSFNLYVADAETGEVIAELDRAGTTGHFNALRF 363

Query: 354 ------WSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVED--SNLQAPTWSPSGRSL 404
                 WSP G  +AF         I V    D   ER    D  ++++ P WSP G  L
Sbjct: 364 ISSSGTWSPDGRRLAFVSSEDGDNQITVWNVVDEEIERSFSVDGVTSMKNPAWSPDGARL 423

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQWV 443
            F+    G   S LY ++L   +   +    YA   P W 
Sbjct: 424 AFAGTDGGI--SDLYVLNLETESVRQLTNDRYADLQPTWA 461



 Score = 37.7 bits (86), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 68/140 (48%), Gaps = 13/140 (9%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +SP+  ++A+A   D  I  +Y+++   +   +++ N R   L P ++ +G+    + 
Sbjct: 414 PAWSPDGARLAFAG-TDGGISDLYVLNLETESV-RQLTNDRYADLQPTWAPDGETIAFAT 471

Query: 277 QKDEA----------MDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            + E           MD+  VD+ S   T R      ++ +  ++PD   + F SD++G 
Sbjct: 472 DRAETNLETLSPSSNMDLGLVDVSSGEVTVRAPFGDALHHNPQFAPDGQSLYFISDQDGF 531

Query: 326 EQLYVMQSNGSDQKRISQDK 345
           + +Y M  +  D+ R+++ K
Sbjct: 532 KDVYRMDLSSGDRFRVTRLK 551


>gi|15835502|ref|NP_297261.1| translocation protein TolB [Chlamydia muridarum Nigg]
 gi|270285685|ref|ZP_06195079.1| translocation protein TolB [Chlamydia muridarum Nigg]
 gi|270289693|ref|ZP_06195995.1| translocation protein TolB [Chlamydia muridarum Weiss]
 gi|301337080|ref|ZP_07225282.1| translocation protein TolB [Chlamydia muridarum MopnTet14]
 gi|14195252|sp|Q9PJE1|TOLB_CHLMU RecName: Full=Protein tolB; Flags: Precursor
 gi|7190916|gb|AAF39683.1| tolB protein, putative [Chlamydia muridarum Nigg]
          Length = 426

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 66/286 (23%), Positives = 119/286 (41%), Gaps = 11/286 (3%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF--VSESVVSGII 189
           D K  ++I   +   +P+   +  H  +D I+  +T   G  + +I+F   S +    + 
Sbjct: 96  DGKGAQKIFSLELSGNPSKDHQSIHEAADRIHFLLTHTPGISSGKIIFSLCSTNSSEELK 155

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L  +D DG ++  LT +   +   P +       AY     +  +    ++T     
Sbjct: 156 QGELWSVDYDGQHLAPLT-NEHSLSVTPAWMHISHIPAYIYVSYKLGVPKIFLNTLSQPT 214

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNA---TERLTNTLF-I 303
            K+I   +     P FS   K       +D   D++  S  L + A    ++L N  F  
Sbjct: 215 GKKILAMQGNQFMPAFSPKTKLLAFISDRDGNPDLFVQSFSLATGAIGTPKKLLNEAFGT 274

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIA 362
             + S+SPD +++VF S+++G  ++Y MQ        R+   K  +   P WSP G  IA
Sbjct: 275 QGNPSFSPDGTRLVFVSNKDGTPRIYQMQIYPEQHPPRLLTKKYRNSSCPTWSPDGKKIA 334

Query: 363 FTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           F         I V     G  E+L     + ++P+W+     L++S
Sbjct: 335 FCSVIKGVRQICVYDLASGRDEQLTTSAEHKESPSWAADSNHLVYS 380


>gi|221133936|ref|ZP_03560241.1| amidohydrolase [Glaciecola sp. HTCC2999]
          Length = 1122

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 47/87 (54%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D   DI+   ++    + LT     NI  + SP+  QI F SDR+G   ++VM  +G++ 
Sbjct: 89  DTLGDIFISSIEGGDAQPLTQDFAWNIHPAVSPNGKQIAFISDRDGLSNVWVMNRDGTEL 148

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTK 365
           ++++++K      P WSP G+ I  TK
Sbjct: 149 RQVTKEKNNIIHAPKWSPDGEYILVTK 175



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 25/155 (16%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +PD   IVF++  +    +++    G D + ++QD  A    P  SP G  IAF      
Sbjct: 80  TPDGKHIVFDTLGD----IFISSIEGGDAQPLTQDF-AWNIHPAVSPNGKQIAFISDRDG 134

Query: 370 KFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSR----------------KKD 411
              + VM +DG++ R + ++ N  + AP WSP G  ++ ++                   
Sbjct: 135 LSNVWVMNRDGTELRQVTKEKNNIIHAPKWSPDGEYILVTKGIMSSRSIPAGEIWMYHHT 194

Query: 412 GDTGSKLYSIDLNG-RNETLINTPAYASDPQWVGF 445
           G TG  +    +NG +++  I  PA++ D Q++ F
Sbjct: 195 GGTGLAIKK-RVNGLKDQKNIADPAFSHDGQYIYF 228



 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 11/107 (10%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP----DSSQIVFESD 321
           S +GK+AL          +Y  DLQS  T+RLT     N    Y P    D   IV+ + 
Sbjct: 395 SPDGKKALFQALGK----LYIRDLQSGKTKRLTKQ---NEHDEYYPRYANDGKSIVYTTW 447

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            + K     + S    +  I   +   Y +P +SP G  + + KF+G
Sbjct: 448 HDQKLGAVRIVSAKGGKGDIITSQPGHYVEPAFSPDGKKVTYRKFTG 494



 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 108/256 (42%), Gaps = 47/256 (18%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++ VM+RDG  +R +T  ++ I+  P++SP+ + +         ++   +M +R   A +
Sbjct: 137 NVWVMNRDGTELRQVTKEKNNIIHAPKWSPDGEYI---------LVTKGIMSSRSIPAGE 187

Query: 252 --RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISAS 308
                +     LA +   NG    +  QK+ A   +S D Q    T+ +T     N    
Sbjct: 188 IWMYHHTGGTGLAIKKRVNG----LKDQKNIADPAFSHDGQYIYFTQDITGGFRFN---- 239

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           Y+ D    +F   R  +E       NG +++ IS    A    P  SP G  +AF +   
Sbjct: 240 YNRDPLTSIFAITRINRE-------NGEEERFISGTGGAVV--PTPSPDGRYVAFIRRIQ 290

Query: 369 EKFAIGVMKKDGSQERLLVED--SNLQAP----------TWSPSGRSLIFSRKKDGDTGS 416
           EK A+ +   +   ER +  D   ++Q             W+P  + L+F       T  
Sbjct: 291 EKTALFLKDLETGSERAIYHDLERDMQEGFGSEGYFSYFDWTPDSQELVFW------TAG 344

Query: 417 KLYSIDLNGRNETLIN 432
           K++ +++N ++   +N
Sbjct: 345 KIHRLNINDQSLNTLN 360


>gi|196231115|ref|ZP_03129975.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Chthoniobacter flavus Ellin428]
 gi|196224945|gb|EDY19455.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Chthoniobacter flavus Ellin428]
          Length = 306

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 21/161 (13%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-GK----EQL 328
           ++ +KD  + + S+D   +  +++   LF +IS    PD +++ F ++ + GK      +
Sbjct: 34  LAYEKDRRVWVASID--GSGAKKIGTGLFPDIS----PDGTRVAFNTEEQTGKTAWARHI 87

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V++     Q         + + P WSP G  IAFT + G  +  G++  DG+  + + +
Sbjct: 88  AVVELASGKQTVFKDVPGDNAYYPRWSPDGTHIAFTLYDGHNWHFGLINADGTGFKYIRK 147

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               +  L +P WSP G+SL     K+      +Y I L+G
Sbjct: 148 SKDAEGTLYSPCWSPDGKSLFAQDMKN------IYRIGLDG 182


>gi|197122051|ref|YP_002134002.1| amidohydrolase [Anaeromyxobacter sp. K]
 gi|196171900|gb|ACG72873.1| amidohydrolase [Anaeromyxobacter sp. K]
          Length = 1042

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 65/240 (27%), Positives = 107/240 (44%), Gaps = 43/240 (17%)

Query: 191 NSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           N L +MD  GA  R LT  P   Q   +P +S +  ++AYA+ D      +Y++D  +  
Sbjct: 341 NRLWLMDVGGAP-RPLTEGPYYAQ---DPAWSRDGTRLAYAS-DKGGTADLYVLDV-VTG 394

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +R+ +     +AP +S +G R      +D+A   + +DL + A  ++   LF     S
Sbjct: 395 AEQRVTSLPGAEVAPAWSPDGGRLAF---QDQAGATHVLDLATGAVRQVVAPLFAPGRPS 451

Query: 309 YSPDSSQIVFESD-------REGKEQLYVMQSNGSDQKRISQDKEASYFD---------P 352
           +S D   +   +        REG  Q+  +      +   ++ +EA+ F+         P
Sbjct: 452 WSADGRTLALAALKPYTRRFREGTSQILTVDV----ESGATRYQEAAPFESLSTRGDDGP 507

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKD------GSQERLLVEDSNLQAPTWSPSGRSLIF 406
           VWSP G  +AF   S     + VM  D      G   R+  E ++  APTWS   R L++
Sbjct: 508 VWSPDGTALAFVMQS----TLWVMPVDASGRAAGPAVRITSEPTD--APTWSGDSRRLLY 561



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 13/161 (8%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           ++S+        RLT+ L       YSP    + F++   G   ++ M+ +G++ ++++ 
Sbjct: 65  LWSLPRGGGEARRLTDGLLEPARPDYSPRGDLVAFQAYAGGTFHIWTMRPDGTEVRQLTS 124

Query: 344 ----DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPT 396
               D+E     P +SP G  IAF+     + +  V   D   G+  R     ++   P 
Sbjct: 125 GHGDDRE-----PRFSPDGTRIAFSSDRAFQGSYDVWVADVATGALTRWTEASADEFEPA 179

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           W+P G  + F     G TG+ + ++D  G   TL   PA A
Sbjct: 180 WTPDGGEIAFVSGA-GSTGTAIEAVDAAGTRRTLATAPAGA 219



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 6/105 (5%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N++ + SPD   +V   D +G   L+ +   G + +R++ D       P +SP+GDL+AF
Sbjct: 45  NVAVTASPDGRDLVL--DLQGV--LWSLPRGGGEARRLT-DGLLEPARPDYSPRGDLVAF 99

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFS 407
             ++G  F I  M+ DG++ R L     + + P +SP G  + FS
Sbjct: 100 QAYAGGTFHIWTMRPDGTEVRQLTSGHGDDREPRFSPDGTRIAFS 144



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 31/216 (14%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P R   +  P  SP+  +V +     + + R++LMD  +  AP+ +         P +S 
Sbjct: 317 PRRALGIVAPALSPDGTRVVF-----QALNRLWLMD--VGGAPRPLTEGPYYAQDPAWSR 369

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G R   +  K    D+Y +D+ + A +R+T+     ++ ++SPD  ++ F+ D+ G   
Sbjct: 370 DGTRLAYASDKGGTADLYVLDVVTGAEQRVTSLPGAEVAPAWSPDGGRLAFQ-DQAGATH 428

Query: 328 LYVMQSNGSDQKRISQDKEASYFD---PVWSPQGDLIAFTKF--------SGEKFAIGVM 376
           +  + +    Q        A  F    P WS  G  +A             G    + V 
Sbjct: 429 VLDLATGAVRQ------VVAPLFAPGRPSWSADGRTLALAALKPYTRRFREGTSQILTVD 482

Query: 377 KKDGS---QERLLVEDSNLQ---APTWSPSGRSLIF 406
            + G+   QE    E  + +    P WSP G +L F
Sbjct: 483 VESGATRYQEAAPFESLSTRGDDGPVWSPDGTALAF 518



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 6/149 (4%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +S  G              I+++        +LT+    +    +SPD ++I F SDR
Sbjct: 88  PDYSPRGDLVAFQAYAGGTFHIWTMRPDGTEVRQLTSGHGDDREPRFSPDGTRIAFSSDR 147

Query: 323 --EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKD 379
             +G   ++V         R ++   A  F+P W+P G  IAF   +G    AI  +   
Sbjct: 148 AFQGSYDVWVADVATGALTRWTE-ASADEFEPAWTPDGGEIAFVSGAGSTGTAIEAVDAA 206

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIF 406
           G++  L    +   L +P+ SP G  L +
Sbjct: 207 GTRRTLATAPAGARLNSPSISPDGAHLAW 235


>gi|316967493|gb|EFV51909.1| conserved hypothetical protein [Trichinella spiralis]
          Length = 382

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 69/164 (42%), Gaps = 24/164 (14%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-- 351
           T  LT+  F N   + SPD   IVF S R G   L++M+ NG++   I+Q  + + +D  
Sbjct: 156 THYLTDDSFYNAEGAVSPDGKSIVFTSTRGGDLDLWLMRLNGTEVVNITQLTDITGYDGG 215

Query: 352 PVWSPQGDLIAFTKFSGE--------------------KFAIGVMKKDGSQERLLVEDSN 391
             +SP GD I +  +  +                       I  M  DGS ++ L     
Sbjct: 216 AFFSPLGDKIVYRAYHPKTAEEITNYFQLLNLSITKPLHMEIFTMNADGSDQKQLTNFGY 275

Query: 392 LQ-APTWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINT 433
              AP + P G  +IFS    G+     L+ ID +G N   I T
Sbjct: 276 ASWAPYFYPDGSKIIFSSNHHGNHSVFNLFLIDQDGNNLEQITT 319



 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 20/85 (23%), Positives = 49/85 (57%), Gaps = 4/85 (4%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE---QLYV 330
           +S+ K   M+I++++   +  ++LTN  + + +  + PD S+I+F S+  G      L++
Sbjct: 247 LSITKPLHMEIFTMNADGSDQKQLTNFGYASWAPYFYPDGSKIIFSSNHHGNHSVFNLFL 306

Query: 331 MQSNGSDQKRISQDKEASYFDPVWS 355
           +  +G++ ++I+ +     F P++S
Sbjct: 307 IDQDGNNLEQITTNPGLDMF-PMFS 330


>gi|299537211|ref|ZP_07050514.1| putative peptidase [Lysinibacillus fusiformis ZC1]
 gi|298727452|gb|EFI68024.1| putative peptidase [Lysinibacillus fusiformis ZC1]
          Length = 662

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 8/134 (5%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-ISVQKDEAMD-----IYSVDLQSNATE 295
           M ++    P+ + + +S +  P+ S +G   + I  + DE  +     ++ ++L+    +
Sbjct: 1   MTSKQGIQPEDLYHLKS-VADPQLSPDGTEVVYIETRMDEKKNDYISNLFYINLKDKTPQ 59

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           + T       S  +SPD SQI F S R GK Q+YV+   G + K+++  K  +   PVWS
Sbjct: 60  QWTFGEDRTSSPVWSPDGSQIAFLSTRTGKSQIYVLSKAGGEAKQVTHCKNGA-TSPVWS 118

Query: 356 PQGDLIAFTKFSGE 369
           P G  IAF+   G+
Sbjct: 119 PCGKKIAFSVVLGK 132



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 12/107 (11%)

Query: 310 SPDSSQIVF-ESDREGKEQLYV-------MQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           SPD +++V+ E+  + K+  Y+       ++     Q    +D+ +S   PVWSP G  I
Sbjct: 24  SPDGTEVVYIETRMDEKKNDYISNLFYINLKDKTPQQWTFGEDRTSS---PVWSPDGSQI 80

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFS 407
           AF      K  I V+ K G + + +    N   +P WSP G+ + FS
Sbjct: 81  AFLSTRTGKSQIYVLSKAGGEAKQVTHCKNGATSPVWSPCGKKIAFS 127


>gi|117918478|ref|YP_867670.1| amidohydrolase [Shewanella sp. ANA-3]
 gi|117610810|gb|ABK46264.1| amidohydrolase [Shewanella sp. ANA-3]
          Length = 1062

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 15/138 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +     + L   +   +   YSPD   I F SD +G + +++M ++GS+ + ++
Sbjct: 73  DIYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDADGGDNIWIMDADGSNPRTVT 132

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVEDSN--- 391
            +       P WSP  + +   K         +GE +   V   +G +   L E  N   
Sbjct: 133 TETFRLLNSPAWSPDSEYLVGRKHFTASRSLGAGEVWLYHVAGGEGVK---LTERPNDEK 189

Query: 392 -LQAPTWSPSGRSLIFSR 408
            L  P +SP GR + FS+
Sbjct: 190 DLGEPAYSPDGRYIYFSQ 207



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 14/139 (10%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD S++ FE+   GK  L  +      +   +  D E  Y  P WS  G  I FT ++ 
Sbjct: 372 SPDGSKVAFEA--LGKIWLKTLPDGKMTRLTELGNDIEELY--PQWSRDGKNIVFTTWND 427

Query: 369 E-KFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-------LY 419
           + +  + V+  K G  ++L  E      PT+SP+G  +++ + + G    +       LY
Sbjct: 428 QDQGTVQVISAKGGKAKQLTTETGKYVEPTFSPNGELVVYRKTQGGHLTPRTWSQEPGLY 487

Query: 420 SIDLNGRNETLINTPAYAS 438
            +DL  +    I+   Y +
Sbjct: 488 KVDLKTKQNKKISAEGYQA 506


>gi|225010671|ref|ZP_03701141.1| amidohydrolase [Flavobacteria bacterium MS024-3C]
 gi|225005224|gb|EEG43176.1| amidohydrolase [Flavobacteria bacterium MS024-3C]
          Length = 1167

 Score = 57.4 bits (137), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 66/130 (50%), Gaps = 4/130 (3%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y++ +       +T+ L   +   +SPD   + + SD+ G + +++M  +  +  +IS
Sbjct: 77  DLYTMPISGGNATAITHGLAYEVHPRFSPDGKSLAYISDKSGSDNIWLMDLSSKEDTQIS 136

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQA--PTWSP 399
           ++++ ++F   WSP GD +   K       + +  KDG     L+ E   L+A  P +  
Sbjct: 137 KEQKNNFFSVAWSPDGDYLVGAK-GRRNIKLHLYHKDGGGGAPLISEPKGLKAIDPFFGA 195

Query: 400 SGRSLIFSRK 409
            G++L FS++
Sbjct: 196 DGKTLYFSQR 205



 Score = 43.9 bits (102), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 12/184 (6%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFE 319
           + PRFS +GK       K  + +I+ +DL S    +++     N  S ++SPD   +V  
Sbjct: 99  VHPRFSPDGKSLAYISDKSGSDNIWLMDLSSKEDTQISKEQKNNFFSVAWSPDGDYLVGA 158

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------KF 371
             R   +     +  G     IS+ K     DP +   G  + F++ +G         ++
Sbjct: 159 KGRRNIKLHLYHKDGGGGAPLISEPKGLKAIDPFFGADGKTLYFSQRNGAWNYNAQLPQY 218

Query: 372 AIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +G    +DG+ + +     +   PT S  G+ L++  + +  TG  L   DLN   E+ 
Sbjct: 219 QVGTYSMEDGATDVITSRYGSAFTPTLSKDGKWLVYGTRFEDQTG--LILRDLNTGEESW 276

Query: 431 INTP 434
           +  P
Sbjct: 277 LAYP 280



 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 8/133 (6%)

Query: 258 SMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           S I   + S +GKR A  ++ +     +Y +DL +   +R+T   F     ++SPD SQI
Sbjct: 357 SQIRDAKPSPDGKRLAFTALNR-----LYVMDLPNGTPKRVTTHDFTEAQPAWSPDGSQI 411

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIG 374
           VF +    +  LY  +                Y  P WS   D I F   S + +  AIG
Sbjct: 412 VFTTWNGSEGHLYKARMGRRTAVVKLTQTTGIYTQPRWSYAKDRIVFLAGSNQVYKDAIG 471

Query: 375 VMKKDGSQERLLV 387
            M  + +++ + +
Sbjct: 472 PMASNATEDLVWI 484


>gi|224538045|ref|ZP_03678584.1| hypothetical protein BACCELL_02934 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520335|gb|EEF89440.1| hypothetical protein BACCELL_02934 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 1066

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 66/139 (47%), Gaps = 16/139 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD ++IVF      K  +Y + + G    +++  +++    PVWSP G  IAF      
Sbjct: 31  SPDGTEIVFCY----KGDIYKVPTEGGAATQLTT-QDSYECTPVWSPDGKQIAFASDRNG 85

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGS---------KLY 419
            F I VM  +G   R L   S  + P T++P G+ ++FS       GS         +LY
Sbjct: 86  NFDIFVMPANGGTARRLTTHSTNEVPATFTPDGKYILFSASIQDPAGSALFPSAAMTELY 145

Query: 420 SI-DLNGRNETLINTPAYA 437
            +  + GR E ++ TPA A
Sbjct: 146 KVPSVGGRTEQVLGTPAEA 164



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  +  A  +LT       +  +SPD  QI F SDR G   ++VM +NG   +R++
Sbjct: 44  DIYKVPTEGGAATQLTTQDSYECTPVWSPDGKQIAFASDRNGNFDIFVMPANGGTARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
                +     ++P G  I F+
Sbjct: 104 T-HSTNEVPATFTPDGKYILFS 124


>gi|88802620|ref|ZP_01118147.1| putative protease [Polaribacter irgensii 23-P]
 gi|88781478|gb|EAR12656.1| putative protease [Polaribacter irgensii 23-P]
          Length = 1081

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 73/156 (46%), Gaps = 13/156 (8%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVF 318
           ++ P  S  G+RA+   + +    I++V  ++     LTN+  + + S  +SP+  ++ +
Sbjct: 304 LINPNVSPKGERAIFEYRGE----IFTVPKKNGTWRNLTNSSGVADRSPIWSPNGDKVAW 359

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD  G+ Q+ +   NG++Q+ I       YF P WSP G  IA+T  +   F I ++  
Sbjct: 360 FSDASGEYQMVIADQNGANQETIKLPNPTFYFQPDWSPDGKHIAYTDTN---FVIWILNL 416

Query: 379 DGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRK 409
              +   +  D          P WSP    + ++++
Sbjct: 417 KTKKITKVAADGYAHPNRTMNPKWSPDSDWIAYAKQ 452



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS +GK    + Q D   DI+ V       +RLT     +++  ++PD  +I+F SDR
Sbjct: 65  PHFSKDGKWIAFTAQYDGNTDIFLVSTSGGEPKRLTYHPSNDVAQGWTPD-GKILFRSDR 123

Query: 323 EGK 325
             K
Sbjct: 124 ASK 126


>gi|218462472|ref|ZP_03502563.1| putative periplasmic component of the Tol biopolymer transport
           system [Rhizobium etli Kim 5]
          Length = 153

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 13/143 (9%)

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D+  DIY++ +   A  RLT+    N    YS D   I F S R G  Q++ +  +G+ 
Sbjct: 7   RDDLFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYFNSSRTGLMQIWRIHPDGTG 66

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVE- 388
            ++++ D   ++F    SP+ D +    +    F         + +M  DG   + L E 
Sbjct: 67  LEQVTSDNYGNWFAHP-SPKNDKVLILSYDPSVFDHPRDLDVRLRLMDMDGGNLKTLFEL 125

Query: 389 ---DSNLQAPTWSPSGRSLIFSR 408
                 +  P WSP G    + R
Sbjct: 126 FGGQGTINVPCWSPDGEEFAYVR 148


>gi|220916821|ref|YP_002492125.1| amidohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954675|gb|ACL65059.1| amidohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 1040

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 107/240 (44%), Gaps = 43/240 (17%)

Query: 191 NSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           N L +MD  GA  R LT  P   Q   +P +S +  ++AYA+ D      +Y++D  +  
Sbjct: 341 NRLWLMDVGGAP-RPLTEGPYYAQ---DPAWSRDGTRIAYAS-DKGGTADLYVLDV-VTG 394

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +R+ +     +AP +S +G R      +D+A   + +DL + A  ++   LF     +
Sbjct: 395 AEQRVTSLPGAEVAPAWSPDGGRLAF---QDQAGATHVLDLATGAVRQVVAPLFAPGRPT 451

Query: 309 YSPDSSQIVFESD-------REGKEQLYVMQSNGSDQKRISQDKEASYFD---------P 352
           +S D   +   +        REG  Q+  +      +   ++ +EA+ F+         P
Sbjct: 452 WSADGRTLALAALKPYTRRFREGTSQILTVDV----ESGATRYQEAAPFESLSTRGDDGP 507

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKD------GSQERLLVEDSNLQAPTWSPSGRSLIF 406
           VWSP G  +AF   S     + VM  D      G   R+  E ++  APTWS   R L++
Sbjct: 508 VWSPDGTALAFVMQS----TLWVMPVDASGRAAGPAVRITSEPTD--APTWSGDSRRLLY 561



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 13/161 (8%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           ++S+        RLT+ L       YSP    + F++   G   ++ M+ +G+D ++++ 
Sbjct: 65  LWSLPRGGGEARRLTDGLLEPARPDYSPRGDLVAFQAYAGGTFHIWTMRPDGTDVRQLTS 124

Query: 344 ----DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPT 396
               D+E     P +SP G  IAF+     + +  V   D   G+  R     ++   P 
Sbjct: 125 GHGDDRE-----PRFSPDGTRIAFSSDRAFQGSYDVWVADVATGALTRWTEAPADEFEPA 179

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           W+P G  + F     G TG+ + ++D  G   TL   PA A
Sbjct: 180 WTPDGGEIAFVSGA-GSTGTAIEAVDAAGTRRTLATAPAGA 219



 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 10/152 (6%)

Query: 260 ILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           I+AP  S +G R +  ++ +   MD+        A   LT   +     ++S D ++I +
Sbjct: 323 IVAPALSPDGTRVVFQALNRLWLMDV------GGAPRPLTEGPYYAQDPAWSRDGTRIAY 376

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD+ G   LYV+      ++R++    A    P WSP G  +AF   +G    + +   
Sbjct: 377 ASDKGGTADLYVLDVVTGAEQRVTSLPGAE-VAPAWSPDGGRLAFQDQAGATHVLDLAT- 434

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            G+  +++        PTWS  GR+L  +  K
Sbjct: 435 -GAVRQVVAPLFAPGRPTWSADGRTLALAALK 465



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 31/216 (14%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P R   +  P  SP+  +V +     + + R++LMD  +  AP+ +         P +S 
Sbjct: 317 PRRALGIVAPALSPDGTRVVF-----QALNRLWLMD--VGGAPRPLTEGPYYAQDPAWSR 369

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G R   +  K    D+Y +D+ + A +R+T+     ++ ++SPD  ++ F+ D+ G   
Sbjct: 370 DGTRIAYASDKGGTADLYVLDVVTGAEQRVTSLPGAEVAPAWSPDGGRLAFQ-DQAGATH 428

Query: 328 LYVMQSNGSDQKRISQDKEASYFD---PVWSPQGDLIAFTKF--------SGEKFAIGVM 376
           +  + +    Q        A  F    P WS  G  +A             G    + V 
Sbjct: 429 VLDLATGAVRQ------VVAPLFAPGRPTWSADGRTLALAALKPYTRRFREGTSQILTVD 482

Query: 377 KKDGS---QERLLVEDSNLQ---APTWSPSGRSLIF 406
            + G+   QE    E  + +    P WSP G +L F
Sbjct: 483 VESGATRYQEAAPFESLSTRGDDGPVWSPDGTALAF 518



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 7/142 (4%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N++ + SPD   +V   D +G   L+ +   G + +R++ D       P +SP+GDL+AF
Sbjct: 45  NVAVTASPDGRDLVL--DLQGV--LWSLPRGGGEARRLT-DGLLEPARPDYSPRGDLVAF 99

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             ++G  F I  M+ DG+  R L     + + P +SP G  + FS  +       ++  D
Sbjct: 100 QAYAGGTFHIWTMRPDGTDVRQLTSGHGDDREPRFSPDGTRIAFSSDRAFQGSYDVWVAD 159

Query: 423 L-NGRNETLINTPAYASDPQWV 443
           +  G        PA   +P W 
Sbjct: 160 VATGALTRWTEAPADEFEPAWT 181



 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 6/149 (4%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +S  G              I+++        +LT+    +    +SPD ++I F SDR
Sbjct: 88  PDYSPRGDLVAFQAYAGGTFHIWTMRPDGTDVRQLTSGHGDDREPRFSPDGTRIAFSSDR 147

Query: 323 --EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKD 379
             +G   ++V         R ++   A  F+P W+P G  IAF   +G    AI  +   
Sbjct: 148 AFQGSYDVWVADVATGALTRWTE-APADEFEPAWTPDGGEIAFVSGAGSTGTAIEAVDAA 206

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIF 406
           G++  L    +   L +P+ SP G  L +
Sbjct: 207 GTRRTLATAPAGARLSSPSISPDGAHLAW 235


>gi|89097995|ref|ZP_01170881.1| YuxL [Bacillus sp. NRRL B-14911]
 gi|89087158|gb|EAR66273.1| YuxL [Bacillus sp. NRRL B-14911]
          Length = 663

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 95/231 (41%), Gaps = 52/231 (22%)

Query: 263 PRFSSNGKRALISVQKD-EAMDIYSVDLQSNATE------RLTNTLFINISASYSPDSSQ 315
           P+ + NGK  + +     E  D YS +L    TE      + T   + N S  +S D  Q
Sbjct: 23  PQLAPNGKDCVYTETVILEEKDAYSSNLYYINTEDQSAPVQWTFGTWRNHSPRWSHDGRQ 82

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-- 373
           + F S+R GK Q++++ + G + ++++  K  +  +PVWSP G  IAFT   GE  ++  
Sbjct: 83  VAFVSNRSGKNQIHILSAAGGEARQLTYCKNGA-GNPVWSPDGSRIAFTVSLGEGESVND 141

Query: 374 --GVMKKD-----------------------------------GSQERLLVEDSNLQAPT 396
             G  +KD                                   G+ E++   +++    +
Sbjct: 142 REGGEEKDEKPAPLEVNKMRYKSDAQGFWNGKFTHIAIADTDTGNIEQVTEGENDYSLQS 201

Query: 397 WSPSGRSLIFSRKKDGDT----GSKLYSIDLNGR-NETLINTPAYASDPQW 442
           WSP G+ L  +    GD     GS  Y I+L  +  E +     Y  +  W
Sbjct: 202 WSPDGKHLAVTADLSGDKDFSYGSDAYLINLETKEQEKITQGTGYFGNITW 252


>gi|218679898|ref|ZP_03527795.1| putative periplasmic component of the Tol biopolymer transport
           system protein [Rhizobium etli CIAT 894]
          Length = 276

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G++      +D+  DIY++ +      RLT     N    YS D   I F S R G
Sbjct: 116 WSPDGRQLAYCGIRDDFFDIYTISVDGGVETRLTYGEGRNDGPDYSADGQWIYFNSSRTG 175

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVM 376
             Q++ +  +G+  ++++ D + ++F    SP+ D +    +    F         + +M
Sbjct: 176 LMQIWRIHPDGTGLEQVTSDNQGNWFAHP-SPKNDKVLILSYDPGVFDHPRDLDVRLRLM 234

Query: 377 KKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
           + DG   + L E       +  P WSP G    + R
Sbjct: 235 EMDGGNLKTLFELFGGQGTINVPCWSPDGDEFAYVR 270



 Score = 44.3 bits (103), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 86/193 (44%), Gaps = 26/193 (13%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM------D 243
           K+S+ ++  +G   R +T   +Q  +   +SP+ +++AY    D D   +Y +      +
Sbjct: 89  KSSIYILPIEGGTPRLVT--ENQPSYWHGWSPDGRQLAYCGIRD-DFFDIYTISVDGGVE 145

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           TR+     R          P +S++G+    +  +   M I+ +       E++T+    
Sbjct: 146 TRLTYGEGRND-------GPDYSADGQWIYFNSSRTGLMQIWRIHPDGTGLEQVTSDNQG 198

Query: 304 NISASYSPDSSQI--------VFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPV 353
           N  A  SP + ++        VF+  R+   +L +M+ +G + K + +    + +   P 
Sbjct: 199 NWFAHPSPKNDKVLILSYDPGVFDHPRDLDVRLRLMEMDGGNLKTLFELFGGQGTINVPC 258

Query: 354 WSPQGDLIAFTKF 366
           WSP GD  A+ ++
Sbjct: 259 WSPDGDEFAYVRY 271



 Score = 38.9 bits (89), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 19/151 (12%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAF- 363
           + +++PD S ++   D      LY +  +G +  ++      +   D   SP G  I   
Sbjct: 27  APNFAPDGSYLLLNGD----GLLYRLPLDGGEVVQVDTGFAVNCNNDHGISPDGTEIVIS 82

Query: 364 --TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             T+F   K +I ++  +G   RL+ E+       WSP GR L +   +  D    +Y+I
Sbjct: 83  DKTEFG--KSSIYILPIEGGTPRLVTENQPSYWHGWSPDGRQLAYCGIR--DDFFDIYTI 138

Query: 422 DLNGRNETLI-------NTPAYASDPQWVGF 445
            ++G  ET +       + P Y++D QW+ F
Sbjct: 139 SVDGGVETRLTYGEGRNDGPDYSADGQWIYF 169


>gi|299137156|ref|ZP_07030338.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
 gi|298600561|gb|EFI56717.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
          Length = 747

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/193 (27%), Positives = 92/193 (47%), Gaps = 17/193 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDRE 323
           FSS+GK   ++     A  ++  +L  +   +LT       S  +SPD SQI F     +
Sbjct: 497 FSSDGKS--VAYVSYPAGILWRANLDGSNPIQLTEPPVYPKSVRWSPDGSQIAFVNRTAD 554

Query: 324 GKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKK 378
           G + ++V+ S+GS + +RIS D   +  DP WSP G  I F+      +  K  + ++  
Sbjct: 555 GVDVIFVVPSDGSGKPQRISPDDRQAETDPSWSPDGRRIVFSTSPNVGASAKSDLRILDI 614

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETL----INT 433
                 ++     L  P WSP GRS+        DT S KL+++  +G+  TL    +  
Sbjct: 615 ASHTAAIIPASDGLLVPHWSPDGRSIA---AMTLDTMSMKLFNLS-SGKWTTLYTGAVAF 670

Query: 434 PAYASDPQWVGFM 446
           P ++ D +W+ ++
Sbjct: 671 PEWSHDGRWIYYV 683



 Score = 43.5 bits (101), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 20/145 (13%)

Query: 266 SSNGKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           S +G   LI  Q   +  A  ++S  L   +  RL + +    SA++SPD  +IV+ S  
Sbjct: 282 SPDGSTLLIISQAGGQGPASSLWSFRLVGGSLHRLGSAVS---SAAWSPDGEKIVYAS-- 336

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                + VM+ +GS+  RI+      Y   + WSP GD I F+K       +  +  DG+
Sbjct: 337 -ASGDISVMRRDGSEAHRIA--SSGGYVRSIAWSPNGDTIRFSK----DGLLWEVSADGA 389

Query: 382 QERLLV----EDSNLQAPTWSPSGR 402
             R L+    + S   +  W+P GR
Sbjct: 390 NLRQLLPGWSKSSTQWSGKWTPDGR 414


>gi|147797552|emb|CAN73514.1| hypothetical protein VITISV_037210 [Vitis vinifera]
          Length = 715

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 32/212 (15%)

Query: 217 PRFSPNQQKVAYATYDD-----------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           P FSP   ++AY  +              ++       T  D   KR G   +    P F
Sbjct: 416 PSFSPGGDRIAYVEFPGVYVVNRDGSGRREVFSGIAFSTAWDH--KRKGVVYTSA-GPTF 472

Query: 266 SSNGKRA-LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           ++   +  ++S+  D        D+   + ++LT     N   S SPD   I F S R G
Sbjct: 473 ATESTKVDIVSINVD--------DVDQPSYKKLTTGGENNAFPSPSPDGKWIAFRSGRSG 524

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFT----KFSGEKFAIGVMKK 378
            + LY+M +   ++  I +  E  + D +  WSP GD I F        G  F + V+  
Sbjct: 525 YKNLYIMDAVXGERGGIHRLTEGPWTDTMCNWSPDGDWIVFASDRENPGGGGFELYVIHP 584

Query: 379 DGSQERLLVEDSN---LQAPTWSPSGRSLIFS 407
           +G+  R +V   +      P +SP G+S++F+
Sbjct: 585 NGTGLRKVVHSGSAGRTNHPWFSPDGKSIVFT 616


>gi|159896545|ref|YP_001542792.1| WD40 domain-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159889584|gb|ABX02664.1| WD40 domain protein beta Propeller [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 620

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 24/160 (15%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           + +AS SPD S++ F SDR GK Q++V  +NG+ Q +++ D +  +  P WS  G  + +
Sbjct: 418 DFNASVSPDGSKMAFVSDRSGKPQIFVSYTNGASQTQVTLD-DCDHQTPSWSADGRYLYW 476

Query: 364 TKFSGEKFAIGVMKKDGS---------------QERLLVEDSNLQA-----PTWSPSGRS 403
               G      + + + +               + R  V  +N        P  SP G  
Sbjct: 477 ASNCGTNAKYNIYRAELNWLADQPSNDYPYLSLELRNKVNLTNSTTSDNGFPRVSPDGTK 536

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQW 442
           ++F+  +DG+  S++Y ++ +G N+T L N+ A    P W
Sbjct: 537 IVFTSNRDGN--SEVYLMNADGTNQTRLTNSSAEDGAPSW 574



 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 48/82 (58%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           PR S +G + + +  +D   ++Y ++       RLTN+   + + S+  D ++I F+S+R
Sbjct: 528 PRVSPDGTKIVFTSNRDGNSEVYLMNADGTNQTRLTNSSAEDGAPSWKLDGTKIAFDSNR 587

Query: 323 EGKEQLYVMQSNGSDQKRISQD 344
           +G   +YVM ++G+ Q +++ +
Sbjct: 588 DGNWNVYVMNTDGTGQAQLTNN 609


>gi|225459633|ref|XP_002285876.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
          Length = 707

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 32/212 (15%)

Query: 217 PRFSPNQQKVAYATYDD-----------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           P FSP   ++AY  +              ++       T  D   KR G   +    P F
Sbjct: 408 PSFSPGGDRIAYVEFPGVYVVNRDGSGRREVFSGIAFSTAWDH--KRKGVVYTSA-GPTF 464

Query: 266 SSNGKRA-LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           ++   +  ++S+  D        D+   + ++LT     N   S SPD   I F S R G
Sbjct: 465 ATESTKVDIVSINVD--------DVDQPSYKKLTTGGENNAFPSPSPDGKWIAFRSGRSG 516

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFT----KFSGEKFAIGVMKK 378
            + LY+M +   ++  I +  E  + D +  WSP GD I F        G  F + V+  
Sbjct: 517 YKNLYIMDAVDGERGGIHRLTEGPWTDTMCNWSPDGDWIVFASDRENPGGGGFELYVIHP 576

Query: 379 DGSQERLLVEDSN---LQAPTWSPSGRSLIFS 407
           +G+  R +V   +      P +SP G+S++F+
Sbjct: 577 NGTGLRKVVHSGSAGRTNHPWFSPDGKSIVFT 608


>gi|312083738|ref|XP_003143987.1| hypothetical protein LOAG_08407 [Loa loa]
 gi|307760846|gb|EFO20080.1| hypothetical protein LOAG_08407 [Loa loa]
          Length = 587

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 28/171 (16%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI+ V+       RLT+T+  +   + SPD  +IVF S R G  ++++M S+G++ K+++
Sbjct: 153 DIFKVNEFGTVISRLTDTVGYDAEGAVSPDGRKIVFTSLRSGDPEIWIMNSDGTEPKQLT 212

Query: 343 QDKEASYFDPVWSPQG--------------------DLIAFTKFSGEKFAIGVMKKDGSQ 382
            D+      P +SP G                    DL+++   S  +  +  M  DGS 
Sbjct: 213 -DELGYDGGPFFSPDGSKIVFRASRPNTSEEIQTYKDLLSYNLVSPLEMELYTMNIDGSG 271

Query: 383 ERLLVE--DSNLQAPTWSPSGRSLIFS---RKKDGDTGS-KLYSIDLNGRN 427
            R +     SN  AP + P  R +IFS    +  G  G+  LY ID  G N
Sbjct: 272 LRKVTSLGGSNW-APFYMPDNRHIIFSSNFNETGGHFGAFNLYMIDEAGGN 321



 Score = 37.0 bits (84), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 43/216 (19%), Positives = 89/216 (41%), Gaps = 33/216 (15%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           + + DI +V    T I R    +G      ++P    +G++ + +  +    +I+ ++  
Sbjct: 149 FPEYDIFKVNEFGTVISRLTDTVGYDAEGAVSP----DGRKIVFTSLRSGDPEIWIMNSD 204

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKE--------------------QLYV 330
               ++LT+ L  +    +SPD S+IVF + R                        +LY 
Sbjct: 205 GTEPKQLTDELGYDGGPFFSPDGSKIVFRASRPNTSEEIQTYKDLLSYNLVSPLEMELYT 264

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKD---GSQE 383
           M  +GS  ++++     S + P + P    I F+    +  G   A  +   D   G+ E
Sbjct: 265 MNIDGSGLRKVTS-LGGSNWAPFYMPDNRHIIFSSNFNETGGHFGAFNLYMIDEAGGNVE 323

Query: 384 RLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKL 418
           R+   +    A P +  +G+  ++   ++G + S+L
Sbjct: 324 RVTFNEGGFDAFPMFDRTGQRFVWGSSRNGRSRSEL 359


>gi|222086206|ref|YP_002544738.1| periplasmic component of the Tol biopolymer transport system
           [Agrobacterium radiobacter K84]
 gi|221723654|gb|ACM26810.1| periplasmic component of the Tol biopolymer transport system
           [Agrobacterium radiobacter K84]
          Length = 275

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GKR      ++   DIY++ +      RLT++   N    YS D   I F S R G
Sbjct: 117 WSPDGKRFSYCGIRNNVFDIYTISVDGGEETRLTHSEGRNDGPDYSADGQWIYFNSSRTG 176

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVM 376
             Q++ +  +G+  ++++ D   ++F    SP+ D +    +  + F         + +M
Sbjct: 177 LMQIWRIHPDGTGLQQVTSDNYGNWFAHP-SPRNDKVLLISYDPDVFDHPRDLNVRMRLM 235

Query: 377 KKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
             DG     L E      ++  P WSP G    + R
Sbjct: 236 DMDGGNLTTLFELFGGQGSINVPNWSPDGDEFAYVR 271


>gi|225459635|ref|XP_002285877.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]
          Length = 680

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 32/212 (15%)

Query: 217 PRFSPNQQKVAYATYDD-----------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           P FSP   ++AY  +              ++       T  D   KR G   +    P F
Sbjct: 381 PSFSPGGDRIAYVEFPGVYVVNRDGSGRREVFSGIAFSTAWDH--KRKGVVYTSA-GPTF 437

Query: 266 SSNGKRA-LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           ++   +  ++S+  D        D+   + ++LT     N   S SPD   I F S R G
Sbjct: 438 ATESTKVDIVSINVD--------DVDQPSYKKLTTGGENNAFPSPSPDGKWIAFRSGRSG 489

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFT----KFSGEKFAIGVMKK 378
            + LY+M +   ++  I +  E  + D +  WSP GD I F        G  F + V+  
Sbjct: 490 YKNLYIMDAVDGERGGIHRLTEGPWTDTMCNWSPDGDWIVFASDRENPGGGGFELYVIHP 549

Query: 379 DGSQERLLVEDSN---LQAPTWSPSGRSLIFS 407
           +G+  R +V   +      P +SP G+S++F+
Sbjct: 550 NGTGLRKVVHSGSAGRTNHPWFSPDGKSIVFT 581


>gi|71277933|ref|YP_269288.1| amidohydrolase family protein [Colwellia psychrerythraea 34H]
 gi|71143673|gb|AAZ24146.1| amidohydrolase family protein [Colwellia psychrerythraea 34H]
          Length = 1071

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 9/135 (6%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++         L   +   +   +SPD   I F SD +G + L++M+++GS+ K ++
Sbjct: 66  DIYTMPASGGEATPLMTDIAWQMQPRFSPDGKYIAFTSDEDGGDNLWIMKADGSEAKAVT 125

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-----VMKKDGSQERLLV----EDSNLQ 393
            +       P WSP G+ I   K      ++G     +  K G    +L     E  +L 
Sbjct: 126 TETFRLLNSPAWSPDGNYIVGRKHYTGTRSLGAGEVWMYHKSGGNGVMLTKRPNEQKDLG 185

Query: 394 APTWSPSGRSLIFSR 408
            P +S  G+ + FS+
Sbjct: 186 EPAFSHDGKYVYFSQ 200


>gi|114045524|ref|YP_736074.1| amidohydrolase [Shewanella sp. MR-7]
 gi|113886966|gb|ABI41017.1| amidohydrolase [Shewanella sp. MR-7]
          Length = 1062

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 15/138 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +IY + +     + L   +   +   YSPD   I F SD +G + +++M +NGS+ + ++
Sbjct: 73  NIYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDADGGDNIWIMDANGSNPRTVT 132

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVEDSN--- 391
            +       P WSP    +   K         +GE +   V   +G +   L E  N   
Sbjct: 133 TETFRLLNSPAWSPDSQYLVGRKHFTASRSLGAGEVWLYHVAGGEGVK---LTERPNDEK 189

Query: 392 -LQAPTWSPSGRSLIFSR 408
            L  P +SP GR + FS+
Sbjct: 190 DLGEPAYSPDGRYIYFSQ 207



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 14/142 (9%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           A  SPD S++ FE+   GK  L  +     S    +  D E  Y  P WS  G  I FT 
Sbjct: 369 AQVSPDGSKVAFEA--LGKIWLKTLPDGKMSRLTELGNDIEELY--PQWSRDGKNIVFTT 424

Query: 366 FSGE-KFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK------ 417
           ++ + +  + V+  K G  ++L  E      PT+SP    +++ + + G    +      
Sbjct: 425 WNDQDQGTVQVISAKGGKAKQLTTEPGKYVEPTFSPDSELVVYRKTQGGHLTPRTWSQEP 484

Query: 418 -LYSIDLNGRNETLINTPAYAS 438
            LY +DL  +    I    Y +
Sbjct: 485 GLYKVDLKTKQNKKITAEGYQA 506


>gi|295133107|ref|YP_003583783.1| peptidase [Zunongwangia profunda SM-A87]
 gi|294981122|gb|ADF51587.1| putative exported peptidase [Zunongwangia profunda SM-A87]
          Length = 1078

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 20/186 (10%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++L D   D + K+I NF      P FS++G +     +KD   ++Y  +L S + E+LT
Sbjct: 200 IWLYDLEND-SYKQISNFEGEDREPVFSADGTKVFYLNEKDGTQNLYVKNLSSGSEEKLT 258

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----- 353
           N     +      DS ++ F      K ++Y M      +K   +  + + F+ +     
Sbjct: 259 NFKDFPVRHLSISDSDKLAF----TWKGEVYTMTPGTQPKKLEIKVLDDAAFEAIKNMDI 314

Query: 354 -------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                   SP    IAF    GE F  GV   D   +R+    +  +  +WSPSG+ LIF
Sbjct: 315 NSVTEFAVSPNNKEIAFVN-RGEVFVTGV--DDSRTKRITNTSTQERMVSWSPSGKELIF 371

Query: 407 SRKKDG 412
           S +KDG
Sbjct: 372 SGEKDG 377



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 29/213 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN +++A+   +  ++    + D+R     KRI N  +      +S +GK  + S +KD
Sbjct: 323 SPNNKEIAFV--NRGEVFVTGVDDSRT----KRITNTSTQERMVSWSPSGKELIFSGEKD 376

Query: 280 EAMDIYSVDLQSNATER-----------LTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   L     E            L NT      A  SPDSS+I F  +R     L
Sbjct: 377 GSWNVYKATLNRPQEEYFYASTIVDIEPLINTTAEEFQAKISPDSSKIAFIEER---NIL 433

Query: 329 YVMQ-SNGSDQKRISQDKEASYFDP----VWSPQGDLIAFTKFSGEKF--AIGVMKKDGS 381
            VM   +G     + + +  SY D      WSP    +      G  F   + ++K +G+
Sbjct: 434 KVMDLKSGKKTVILPEGRNHSYSDGDWSFQWSPDSRWLMVDDQKGYFFNNNVALIKANGN 493

Query: 382 QERLLVEDSNLQAPT--WSPSGRSLIFSRKKDG 412
            E     +S        W+  G+ + ++  ++G
Sbjct: 494 GEIFHPVNSGFGESNAKWAMDGKMMTYTSSREG 526


>gi|113968357|ref|YP_732150.1| amidohydrolase [Shewanella sp. MR-4]
 gi|113883041|gb|ABI37093.1| amidohydrolase [Shewanella sp. MR-4]
          Length = 1062

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 15/138 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +     + L   +   +   YSPD   I F SD +G + +++M ++GS+ + ++
Sbjct: 73  DIYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDADGGDNIWIMDADGSNPRTVT 132

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVEDSN--- 391
            +       P WSP    +   K         +GE +   V   +G +   L E  N   
Sbjct: 133 TETFRLLNSPAWSPDSQYLVGRKHFTASRSLGAGEVWLYHVAGGEGVK---LTERPNDEK 189

Query: 392 -LQAPTWSPSGRSLIFSR 408
            L  P +SP GR + FS+
Sbjct: 190 DLGEPAYSPDGRYIYFSQ 207



 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 14/142 (9%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           A  SPD S++ FE+   GK  L  +     S    +  D E  Y  P WS  G  I FT 
Sbjct: 369 AQVSPDGSKVAFEA--LGKIWLKTLPDGKMSRLTELGNDIEELY--PQWSRDGKNIVFTT 424

Query: 366 FSGE-KFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK------ 417
           ++ + +  + V+  K G  ++L  E      PT+SP+G  +++ + + G    +      
Sbjct: 425 WNDQDQGTVQVISAKGGKAKQLSTEPGKYVEPTFSPNGELVVYRKTQGGHLTPRTWSQEP 484

Query: 418 -LYSIDLNGRNETLINTPAYAS 438
            LY +DL  +    I    Y +
Sbjct: 485 GLYKVDLKTKQNKKITAEGYQA 506


>gi|308047731|ref|YP_003911297.1| amidohydrolase [Ferrimonas balearica DSM 9799]
 gi|307629921|gb|ADN74223.1| amidohydrolase [Ferrimonas balearica DSM 9799]
          Length = 1064

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 9/135 (6%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +       L   +  ++   +SPD ++I F SD++G + ++ ++ +GSD + ++
Sbjct: 71  DIYTMPIGGGDATPLVKGIAWHMQPRFSPDGTRIAFTSDQDGGDNIWTVKLDGSDMQPVT 130

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-----VMKKDGSQERLLVEDSN----LQ 393
           ++       P WSP G  +   K    + ++G     +    G +   L E  N    L 
Sbjct: 131 KETFRLLNSPAWSPDGQYLVGRKHYTAQRSLGAGEVWMYHISGGKGIQLTERPNDQKDLG 190

Query: 394 APTWSPSGRSLIFSR 408
            P +SP GR + FS+
Sbjct: 191 EPAFSPDGRYIYFSQ 205



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 24/185 (12%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIV-- 317
           + PRFS +G R   +  +D   +I++V L  +  + +T   F  + S ++SPD   +V  
Sbjct: 93  MQPRFSPDGTRIAFTSDQDGGDNIWTVKLDGSDMQPVTKETFRLLNSPAWSPDGQYLVGR 152

Query: 318 --FESDRE-GKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFS--GEK 370
             + + R  G  ++++   +G    ++++  + +    +P +SP G  I F++ +  G+ 
Sbjct: 153 KHYTAQRSLGAGEVWMYHISGGKGIQLTERPNDQKDLGEPAFSPDGRYIYFSQDATPGKT 212

Query: 371 FAI------GVMK------KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           F        G+ K      + G  E LL        PT SP GR L +   +DG   S L
Sbjct: 213 FHYSKDSVKGIYKIQRYDRQTGEIEVLLEGSGGAIRPTPSPDGRQLAYI-ARDGFQ-SAL 270

Query: 419 YSIDL 423
           Y  DL
Sbjct: 271 YLYDL 275


>gi|77359984|ref|YP_339559.1| protease [Pseudoalteromonas haloplanktis TAC125]
 gi|76874895|emb|CAI86116.1| putative protease [Pseudoalteromonas haloplanktis TAC125]
          Length = 1080

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 95/192 (49%), Gaps = 19/192 (9%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREG 324
           S +GKR L + + +    ++SV +++  T  L++T     ISA++SP+   I + SD  G
Sbjct: 327 SHDGKRVLFTARGE----LFSVPVKNGPTRNLSHTPKGREISATWSPNGRYIAYMSDETG 382

Query: 325 KEQLYVM-QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           + ++Y+  ++N +  K+++ +     F+PVWSP    + F+  +   + + +  K G Q 
Sbjct: 383 EYEIYLKDRANNNQVKQLTSNGSIWRFEPVWSPDNKKLLFSDQNHTLWWLDI--KTGKQR 440

Query: 384 RLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-------NT 433
           ++     N   L +  WSP+   ++F +  +    S L+  +L  +  T +         
Sbjct: 441 KIDTAKYNEDGLTSYIWSPNSEDIVFVKNNENRYAS-LWHYNLKDKRVTRLTDDMSSETN 499

Query: 434 PAYASDPQWVGF 445
           PA++ D Q + F
Sbjct: 500 PAFSPDGQQLYF 511



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 30/189 (15%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A DIY  + ++  + RLT+ +       +SPD SQI F +   G  Q+YVM  +GSD K+
Sbjct: 48  AGDIYIANTKTGKSTRLTDHIGFETFPKFSPDGSQIAFSAQYNGSRQVYVMNRDGSDLKQ 107

Query: 341 ISQDKEASYFDPV---------WSPQGDLIAF----TKFS---GEKFAIGVMKKDGSQER 384
           ++   +     P          W+P G  I F    T +    G  +   V    G ++ 
Sbjct: 108 LTYYNDVGVMPPRGGFDYRVLDWTPDGKHIVFRANRTPYGQRVGRPYI--VPAAGGLEQP 165

Query: 385 LLVEDSNLQAPTWSPSGRSLIFS---------RKKDGDTGSKLYSIDL-NGRNETLINTP 434
           L + ++       SP G+  +++         ++  G     ++  DL N +++ L    
Sbjct: 166 LAIPETG--GGMLSPDGKQYVYTPIDREFRTWKRTRGGRAQDVWVYDLENNKSKQLTTNR 223

Query: 435 AYASDPQWV 443
           A    P WV
Sbjct: 224 ATDQQPTWV 232


>gi|116619169|ref|YP_821325.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222331|gb|ABJ81040.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 877

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 87/205 (42%), Gaps = 23/205 (11%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           + +P+R+G + +  LA   +          ++  A  ++           LT    +   
Sbjct: 291 EESPRRLGWYWTAALAVGLAIGAAGGWWWARRGVAASMW------GPVRPLTTYSGLEYE 344

Query: 307 ASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + SPD  Q+ F  D +GK+   +YV   +G    R++ D  A +  P WSP G  +AF 
Sbjct: 345 PALSPDGKQVAFAWDGDGKDNFNIYVRLVDGGAPLRLTTDAAADH-SPSWSPDGSQVAFL 403

Query: 365 KFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPT------WSPSGRSLIFSRKKDGDTG 415
           +    + A+ ++   G  ER LV+    S    PT      WSP GR L FS  +D +  
Sbjct: 404 R----QNAVFLVPSLGGVERRLVQFPRGSIYGNPTARSSISWSPDGRFLAFSGTEDDNPP 459

Query: 416 SKLYSIDLNGRNETLINTP-AYASD 439
           S   +   +G      +TP  Y SD
Sbjct: 460 SIWVASRESGEAHRFSSTPRGYLSD 484



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 10/182 (5%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA----MDIYSVDLQSNATER 296
           L+   +D A   +G    ++  P  S  G+R     +  +     M+  S D  +   ++
Sbjct: 559 LLRLTLDGAMHPLGIDNGIVRWPSLSRTGRRMAYEKRHIDTNIYRMEGPSADGGARPFDQ 618

Query: 297 LTNTLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           L     ++ +A       SPD  ++VF SDR G  ++YV  ++G+DQ  ++     +   
Sbjct: 619 LGVAAVVDSTALDREPMLSPDGRRMVFNSDRSGSYEIYVANADGTDQVALTAMGLTALGS 678

Query: 352 PVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           P WSP G  + F ++ +G      +    G   R+  E+     P++S  G  + F+  +
Sbjct: 679 PRWSPDGQTVVFDRYENGHSMIYTINAGGGKPRRVTSEEFRDIRPSYSHDGAWIYFASNR 738

Query: 411 DG 412
            G
Sbjct: 739 SG 740



 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/191 (20%), Positives = 90/191 (47%), Gaps = 10/191 (5%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           EP  SP+ +++ + + D      +Y+ +              + + +PR+S +G+  +  
Sbjct: 633 EPMLSPDGRRMVFNS-DRSGSYEIYVANADGTDQVALTAMGLTALGSPRWSPDGQTVVFD 691

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             ++    IY+++       R+T+  F +I  SYS D + I F S+R G+ +++ +   G
Sbjct: 692 RYENGHSMIYTINAGGGKPRRVTSEEFRDIRPSYSHDGAWIYFASNRSGRLEIWKVPPGG 751

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              ++I+ +     F+   SP G L+ +    G    +  M  +G +  L++ ++ +   
Sbjct: 752 GKPQQITHNFGTEPFE---SPDGRLLYYMNDQG----LWSMPVEGGEPTLVLPEAVMY-- 802

Query: 396 TWSPSGRSLIF 406
            ++ +GRS+ +
Sbjct: 803 RYALAGRSIYY 813



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 31/238 (13%)

Query: 215 FEPRFSPNQQKVAYA-TYDDEDILRVY--LMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +EP  SP+ ++VA+A   D +D   +Y  L+D     AP R+    +   +P +S +G +
Sbjct: 343 YEPALSPDGKQVAFAWDGDGKDNFNIYVRLVD---GGAPLRLTTDAAADHSPSWSPDGSQ 399

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLT----NTLFINISA----SYSPDSSQIVFE-SDR 322
                Q      ++ V        RL      +++ N +A    S+SPD   + F  ++ 
Sbjct: 400 VAFLRQNA----VFLVPSLGGVERRLVQFPRGSIYGNPTARSSISWSPDGRFLAFSGTED 455

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKD- 379
           +    ++V      +  R S        D  P +SP G  IA+ + + + F+  V+ ++ 
Sbjct: 456 DNPPSIWVASRESGEAHRFSSTPRGYLSDSSPAFSPDGHTIAYVR-ARDTFSRAVVLQEI 514

Query: 380 -------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                  G +      D  +Q   W P GR LI S ++ G+  + L  + L+G    L
Sbjct: 515 HAGGTPQGKEREATSYDKTIQELAWQPDGRGLILSVRQGGEH-AALLRLTLDGAMHPL 571



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 102/252 (40%), Gaps = 27/252 (10%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP----KRIGNFRSMILAPRFSSNGKRA 272
           P FSP+   +AY    D     V L +      P    +   ++   I    +  +G+  
Sbjct: 487 PAFSPDGHTIAYVRARDTFSRAVVLQEIHAGGTPQGKEREATSYDKTIQELAWQPDGRGL 546

Query: 273 LISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           ++SV Q  E   +  + L   A   L     I    S S    ++ +E  R     +Y M
Sbjct: 547 ILSVRQGGEHAALLRLTLD-GAMHPLGIDNGIVRWPSLSRTGRRMAYEK-RHIDTNIYRM 604

Query: 332 QSNGSD-------QKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +   +D       Q  ++   +++  D  P+ SP G  + F       + I V   DG+ 
Sbjct: 605 EGPSADGGARPFDQLGVAAVVDSTALDREPMLSPDGRRMVFNSDRSGSYEIYVANADGTD 664

Query: 383 ERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT------- 433
           +  L     + L +P WSP G++++F R ++G   S +Y+I+  G     + +       
Sbjct: 665 QVALTAMGLTALGSPRWSPDGQTVVFDRYENGH--SMIYTINAGGGKPRRVTSEEFRDIR 722

Query: 434 PAYASDPQWVGF 445
           P+Y+ D  W+ F
Sbjct: 723 PSYSHDGAWIYF 734



 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 32/148 (21%), Positives = 65/148 (43%), Gaps = 9/148 (6%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQIVFESDREGKEQL 328
           A    + D    I+    +S    R ++T      + S ++SPD   I +   R+   + 
Sbjct: 449 AFSGTEDDNPPSIWVASRESGEAHRFSSTPRGYLSDSSPAFSPDGHTIAYVRARDTFSRA 508

Query: 329 YVMQSNGSDQKRISQDKEASYFDP-----VWSPQG-DLIAFTKFSGEKFAIGVMKKDGSQ 382
            V+Q   +      +++EA+ +D       W P G  LI   +  GE  A+  +  DG+ 
Sbjct: 509 VVLQEIHAGGTPQGKEREATSYDKTIQELAWQPDGRGLILSVRQGGEHAALLRLTLDGAM 568

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
             L +++  ++ P+ S +GR + + ++ 
Sbjct: 569 HPLGIDNGIVRWPSLSRTGRRMAYEKRH 596


>gi|226349776|ref|YP_002776890.1| hypothetical protein ROP_pROB01-05390 [Rhodococcus opacus B4]
 gi|226245691|dbj|BAH56038.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 309

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 9/135 (6%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD S I F S  +G   + +M ++GSD + I+  +  S     +SP G  + FT    
Sbjct: 125 FSPDGSSIAF-SKSDGS--ISIMNTDGSDLRVIAPAESGSVA--TFSPDGSRVVFTA--- 176

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           + + + V    G  + LL +      P +SP G +L+FS  + G+ GS++YS+   G   
Sbjct: 177 DGYIVEVPTTGGESKVLLRDQFWNSDPAYSPDGSTLVFSSNRGGNHGSEIYSMPAGGGEI 236

Query: 429 TLINTPAYASDPQWV 443
           T + T  YA  PQ+ 
Sbjct: 237 TRL-TDTYAVHPQFT 250



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 89/200 (44%), Gaps = 34/200 (17%)

Query: 215 FEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++P FSP+   +A++  D    I+     D R+  AP   G+  +      FS +G R +
Sbjct: 121 YQPVFSPDGSSIAFSKSDGSISIMNTDGSDLRV-IAPAESGSVAT------FSPDGSRVV 173

Query: 274 ISVQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIVFESDREGKE--QLY 329
            +       D Y V++ +   E   L    F N   +YSPD S +VF S+R G    ++Y
Sbjct: 174 FTA------DGYIVEVPTTGGESKVLLRDQFWNSDPAYSPDGSTLVFSSNRGGNHGSEIY 227

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---SGE---------KFAIGVMK 377
            M + G +  R++ D  A +  P ++P G  I +T+    SGE            +  M 
Sbjct: 228 SMPAGGGEITRLT-DTYAVH--PQFTPDGSRILYTRATTQSGELVVDISTSNSAELASMN 284

Query: 378 KDGS-QERLLVEDSNLQAPT 396
            DGS Q+RL       Q P+
Sbjct: 285 PDGSDQKRLTPRSITAQYPS 304


>gi|108803163|ref|YP_643100.1| peptidase S9, prolyl oligopeptidase active site region [Rubrobacter
           xylanophilus DSM 9941]
 gi|108764406|gb|ABG03288.1| peptidase S9, prolyl oligopeptidase active site region [Rubrobacter
           xylanophilus DSM 9941]
          Length = 588

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 11/175 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G+R             + V  +    E+LT        A YSP + ++V+  D  G
Sbjct: 19  WSPDGRRVTFITSITGVPQAWEVAAEGGWPEQLTFHEERVAQAEYSPAAERLVYSMDAGG 78

Query: 325 KE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDG 380
            E  QL+V+      ++ ++   +A +    +SP G  IA+T  + +G  F + V   DG
Sbjct: 79  NERMQLFVLDRRTGVERDLTGRPDAIHHFGAFSPDGGRIAYTATRRNGTDFDVYVQSLDG 138

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKK---DGDTGSKLYSIDLNGRNETLIN 432
             E +           WSP G SL+ SR +   DGD    L+ +DL     TL+ 
Sbjct: 139 EPEPVWEVSGYHAVACWSPDGSSLVVSRHRSNMDGD----LFLLDLESGEATLLT 189


>gi|197104557|ref|YP_002129934.1| putative transcriptional regulator [Phenylobacterium zucineum HLK1]
 gi|196477977|gb|ACG77505.1| putative transcriptional regulator [Phenylobacterium zucineum HLK1]
          Length = 697

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 8/186 (4%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++ +DTR    P+RI      +   R S + +R  ++V+        ++     A   +T
Sbjct: 392 LWTVDTRRPGEPRRISLGFGQLTFSRMSID-RRNRLAVELPRGRTNIALVGPDGAVTPVT 450

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           N    +     + D + + + S+R G  +L++    G+   R++    +    P WSP G
Sbjct: 451 NAAGADWEPEGAADGA-VAYVSNRSGSSELWI-SPPGTQPVRLTNIVGSYVHSPAWSPDG 508

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSK 417
             +AF    G K  I  + +DGS+ R + +D   +  T WSP GRSL + ++    TG++
Sbjct: 509 RSLAFVAVKGRKAEIYTVARDGSRLRAVTDDGTDKLETAWSPDGRSLRYLQR----TGAR 564

Query: 418 LYSIDL 423
              ++L
Sbjct: 565 YRVMEL 570


>gi|226226442|ref|YP_002760548.1| hypothetical protein GAU_1036 [Gemmatimonas aurantiaca T-27]
 gi|226089633|dbj|BAH38078.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 1168

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 26/183 (14%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R Y +DTR        G + S+ ++P    +GK+ +     D   D+Y++        R+
Sbjct: 76  RSYALDTRE-------GTWLSVDISP----DGKQIVF----DMLGDLYTMPFAGGEATRI 120

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN L  +    +SPD   +VF SDR+G + ++ +    ++ K I++ +   Y  P +SP 
Sbjct: 121 TNGLAFDAQPRFSPDGKSVVFISDRQGADNVHTIDLATNEIKEITRGRTNVYLSPEYSPD 180

Query: 358 GDLIAFTK--FSGEKFAIGVMK-KDGSQERLLVEDSNLQAPT--------WSPSGRSLIF 406
           G  I  +K  F G    + +   + GS   L    +N    T        +SP GR L +
Sbjct: 181 GQYIVASKGSFRGALPTLWMYHVRGGSGVSLYTAPANAAPGTAVQQAGASFSPDGRYLWY 240

Query: 407 SRK 409
           +++
Sbjct: 241 TQR 243



 Score = 41.2 bits (95), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 63/151 (41%), Gaps = 26/151 (17%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS 367
           SPD  Q+ F S     ++LYVM       +R+S   D EA   +P WSP G  +A+  ++
Sbjct: 403 SPDGKQLAFIS----LDKLYVMDWPSGTPRRVSTLNDIEA---EPAWSPDGRSLAWVTWA 455

Query: 368 --GEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSG-RSLIFS------RKKDGDTGS 416
             G +     M    +   L V  S    + P WSP+G R L+        R + G TG+
Sbjct: 456 NNGGRLYKSAMVAGRATRVLPVSASTGTFRQPVWSPNGARILVLQSGAQGRRDQTGVTGT 515

Query: 417 KLY------SIDLNGRNETLINTPAYASDPQ 441
                    S   NG   TLI   A  S P 
Sbjct: 516 TQLMWFAANSTSTNGDAGTLIARAAGRSKPH 546



 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 31/192 (16%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYS 310
           RI N  +    PRFS +GK  +    +  A +++++DL +N  + +T     + +S  YS
Sbjct: 119 RITNGLAFDAQPRFSPDGKSVVFISDRQGADNVHTIDLATNEIKEITRGRTNVYLSPEYS 178

Query: 311 PDSSQIVFESD--------------REGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           PD   IV                  R G    LY   +N +    + Q   AS+     S
Sbjct: 179 PDGQYIVASKGSFRGALPTLWMYHVRGGSGVSLYTAPANAAPGTAV-QQAGASF-----S 232

Query: 356 PQGDLIAFTKFSG--------EKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF 406
           P G  + +T+ +G         ++ +    ++ G +E       +   PT SP G+ +++
Sbjct: 233 PDGRYLWYTQRTGAWHYNAQFPQYQVWTYDRETGEREIQSTRYGSAVRPTVSPDGKWMVY 292

Query: 407 SRKKDGDTGSKL 418
             + +  TG ++
Sbjct: 293 GSRYENKTGLRI 304


>gi|255535417|ref|YP_003095788.1| WD40-like beta Propeller [Flavobacteriaceae bacterium 3519-10]
 gi|255341613|gb|ACU07726.1| WD40-like beta Propeller [Flavobacteriaceae bacterium 3519-10]
          Length = 741

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 112/284 (39%), Gaps = 59/284 (20%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE---DILRVYLMD-TRIDRAP---KRIG 254
           NIR LT   D    E  FSP+ +K+     + E      ++YL+D T+ D +    K I 
Sbjct: 28  NIRKLTFGGDNA--EAYFSPDSKKLTLQVTNPEIGAQCDQIYLLDLTKKDTSVGDLKLIS 85

Query: 255 NFRSMILAPRFSSNGKRALISVQKD----------------------EAMDIYSVDLQSN 292
                     F  +GK  L +   +                      E  DIY  DL   
Sbjct: 86  TGDGRTTCSFFMPDGKHILYASTHEASKACPEKPKPRTDGKYLWPVYEEFDIYIADLNGK 145

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----------- 341
            T +LT++   +  A  SPD   IVF S R G  +L+ M  +G + K++           
Sbjct: 146 ITRKLTDSPGYDAEAVVSPDGKYIVFTSMRSGDLELWRMDIDGKNLKQLTTGLGYDGGAF 205

Query: 342 -SQDKEASYFDPVW-SPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQ 393
            S D +   F     + + ++  + +  GE         I  M  DGS    L + +NL 
Sbjct: 206 FSHDSKKLVFRSSRPTSEKEVKEYRELLGENLVAPTNMEIYTMNVDGSD---LKQVTNLG 262

Query: 394 APTWS----PSGRSLIFSRKKDGDTGS--KLYSIDLNGRNETLI 431
              WS    PS R ++FS       G   ++YSID +GRN T I
Sbjct: 263 KANWSPYFHPSDRKIVFSSNHHSTRGYDFQIYSIDTDGRNLTQI 306



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 26/170 (15%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +GK  + +  +   ++++ +D+     ++LT  L  +  A +S DS ++VF S R   
Sbjct: 163 SPDGKYIVFTSMRSGDLELWRMDIDGKNLKQLTTGLGYDGGAFFSHDSKKLVFRSSRPTS 222

Query: 326 E--------------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           E                    ++Y M  +GSD K+++   +A++  P + P    I F+ 
Sbjct: 223 EKEVKEYRELLGENLVAPTNMEIYTMNVDGSDLKQVTNLGKANW-SPYFHPSDRKIVFSS 281

Query: 366 FS----GEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKK 410
                 G  F I  +  DG     +  +S   A P +SP G+ L+FS  +
Sbjct: 282 NHHSTRGYDFQIYSIDTDGRNLTQITYESEFNAFPMFSPDGKQLVFSSNR 331


>gi|91791380|ref|YP_561031.1| amidohydrolase [Shewanella denitrificans OS217]
 gi|91713382|gb|ABE53308.1| amidohydrolase [Shewanella denitrificans OS217]
          Length = 1065

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 63/138 (45%), Gaps = 15/138 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +     + L   +   +   YSPD   I F SD +G + ++VM ++GS+   ++
Sbjct: 75  DIYQMPISGGDAKPLAKGIAWQMQPVYSPDGKYIAFTSDEDGGDNIWVMNADGSNPHPVT 134

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMKKDGSQERLLVEDSN--- 391
           ++       P WSP    L+A   F+       GE +   V   +G +   L E  N   
Sbjct: 135 KETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHVAGGEGVK---LTERPNDQK 191

Query: 392 -LQAPTWSPSGRSLIFSR 408
            L  P +SP GR + FS+
Sbjct: 192 DLGEPAYSPDGRYIYFSQ 209



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 14/142 (9%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTK 365
           A  SPD  ++VFE+   GK  L++       Q+R+++ D + +   P WS  G  I FT 
Sbjct: 371 AQVSPDGKKVVFEA--LGK--LWIRDIENDTQERLTRLDDDINELFPQWSRDGKQIVFTT 426

Query: 366 FSGEKFAIG--VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK------ 417
           ++ +       +  + G   RL  E      PT++P+G+ +++ +   G+   +      
Sbjct: 427 WNDQDQGTVSLISARGGKATRLTSEPGKYVEPTFAPNGQFVVYRKANGGNITPRTWSQET 486

Query: 418 -LYSIDLNGRNETLINTPAYAS 438
            LY +D+ G+  T I    Y +
Sbjct: 487 GLYKVDVKGKQNTKITAEGYQA 508



 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 67/278 (24%), Positives = 116/278 (41%), Gaps = 51/278 (18%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT-----RIDRAPKRIGNFRSMI-- 260
           P+  + L EP +SP+ + + ++  D       Y  D+     +I R   + G+   ++  
Sbjct: 187 PNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVSGIYKIKRYDTQTGDIEILVEG 246

Query: 261 ----LAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTL-----------FIN 304
               + P  S +GK+ L  +++D     +Y +DLQS  T +L   L            + 
Sbjct: 247 TGGAIRPTPSPDGKK-LAYIKRDGFQSSLYLLDLQSGETNKLYAELDRDMQETWAIHGVY 305

Query: 305 ISASYSPDSSQIVFESDREGK-EQLYVMQSNGSD-------------QKRISQDKEASYF 350
            S +++ D+S IVF +  +GK  +L +   + SD               R +Q+ +   F
Sbjct: 306 PSMAWTQDNSSIVFWA--KGKINKLKLKDLSVSDIPFKVKAQLDIQPSVRFTQNLDQDKF 363

Query: 351 D------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGR 402
           D         SP G  + F      K  I  ++ D +QERL  L +D N   P WS  G+
Sbjct: 364 DVKMLRMAQVSPDGKKVVFEALG--KLWIRDIEND-TQERLTRLDDDINELFPQWSRDGK 420

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            ++F+   D D G+        G+   L + P    +P
Sbjct: 421 QIVFTTWNDQDQGTVSLISARGGKATRLTSEPGKYVEP 458


>gi|120434675|ref|YP_860364.1| WD-40-like repeat-containing amidohydrolase [Gramella forsetii
           KT0803]
 gi|117576825|emb|CAL65294.1| WD40-like repeat containing amidohydrolase family protein [Gramella
           forsetii KT0803]
          Length = 1102

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 37/218 (16%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAM-------DIYSVDLQSNATERLTNTLFINISA 307
           NF++M L    +S G    + V  D          DIY + +       L   +   +  
Sbjct: 45  NFKTMTLN---ASEGTWMNLDVSPDGKTIVFDLLGDIYKMPISGGKASILRTGIPYEVQP 101

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKF 366
            +SPD S+I F SD  G + +++M  NG + K+I+++K     + VW+P G+ +IA   F
Sbjct: 102 RFSPDGSKISFTSDAGGGDNIWIMDVNGKNAKQITEEKFRLLNNAVWTPDGNSVIARKHF 161

Query: 367 S-------GEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSR------- 408
           +       GE +   +  K+G Q   L E  N Q     P+ +  G+ L +S        
Sbjct: 162 TSGRSLGAGEMWQYHIAAKEGLQ---LTERKNDQQDVNEPSITSDGKYLFYSEDMYPGGN 218

Query: 409 -KKDGDTGSKLYSIDL----NGRNETLINTPAYASDPQ 441
            + + D   ++Y I       G   T+   P  A+ P+
Sbjct: 219 FQYNKDPNKQIYVIKRYNFETGETITVTGGPGGAARPE 256



 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 23/181 (12%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRIS 342
           ++   L +   +R+TN+       S+SPD + I++ + D +    +  +  +GS  K I+
Sbjct: 390 LWKKSLPNGKPQRITNSEDFEFEPSFSPDGNHIIYVTWDDQNLGTIKRVSLSGSASKTIT 449

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSG---------EKFAIGVMKKDGSQERLLVEDSNLQ 393
            +K   Y +P +S  G +I F+K SG         ++  I  M   G   + LV++    
Sbjct: 450 SEK-GIYRNPSYSNDGKMIVFSKESGNSDLGQTFTKEPGIYTMNASGDNVKKLVKEGIF- 507

Query: 394 APTWSPSGRSLIFSRKKD--GDTGSKLYSIDLNGRNE-TLINTPAYAS------DPQWVG 444
            P ++     + F       G+    L S+DLNG++E T IN+  YA+      D +W+ 
Sbjct: 508 -PIFNVDDSRIFFQTGGYFFGNITKSLKSVDLNGKDERTHINS-KYANRILPSPDNKWIL 565

Query: 445 F 445
           F
Sbjct: 566 F 566



 Score = 37.0 bits (84), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 25/168 (14%)

Query: 215 FEPRFSPNQQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           FEP FSP+   + Y T+DD++   I RV L  +    A K I + + +   P +S++GK 
Sbjct: 411 FEPSFSPDGNHIIYVTWDDQNLGTIKRVSLSGS----ASKTITSEKGIYRNPSYSNDGKM 466

Query: 272 ALISVQKDEA---------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD- 321
            + S +   +           IY+++   +  ++L       I   ++ D S+I F++  
Sbjct: 467 IVFSKESGNSDLGQTFTKEPGIYTMNASGDNVKKLVKEGIFPI---FNVDDSRIFFQTGG 523

Query: 322 ---REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
                  + L  +  NG D++     K A+   P  SP    I F+  
Sbjct: 524 YFFGNITKSLKSVDLNGKDERTHINSKYANRILP--SPDNKWILFSNL 569


>gi|73670800|ref|YP_306815.1| hypothetical protein Mbar_A3362 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397962|gb|AAZ72235.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 574

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 33/148 (22%)

Query: 308 SYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFD------------PV 353
           S SPD  +I+F S  +G    Q Y+  ++GS+ K        SY+D              
Sbjct: 254 SLSPDRKKIIFASGLQGSFDSQTYISNTDGSNLK-----GNISYYDGDNPEDTNLLTKEY 308

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           W P G L+       +   + +++ D + +RLL E  N   P W P G+ ++F   K+  
Sbjct: 309 WQPNGSLL----LVNQNRNLYIVEGDENNKRLLYE-GNASEPQWFPDGKKILFVENKN-- 361

Query: 414 TGSKLYSIDLNGRNETLIN----TPAYA 437
              KLYSID++G N + I     TPA++
Sbjct: 362 ---KLYSIDIDGTNLSFITNFGPTPAHS 386


>gi|297620364|ref|YP_003708501.1| putative protein TolB [Waddlia chondrophila WSU 86-1044]
 gi|297375665|gb|ADI37495.1| putative protein TolB [Waddlia chondrophila WSU 86-1044]
          Length = 436

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 126/301 (41%), Gaps = 44/301 (14%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           RKI H I+D I++++ G  G  ++R+L+   +V      + +   D DGAN   LT  + 
Sbjct: 129 RKIIHRIADAIHRALFGADGIASTRLLYTVRTVEEKTEYSEIWQSDYDGANAMQLTSRQA 188

Query: 212 QILFEPRFSPN-----QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                P + P+      +   Y +Y    I +VY     I    + IG  R M+     S
Sbjct: 189 GYCITPGYVPHLPGKQAESFFYVSYKT-GIPKVY-----IASLGEPIG--RKMLT---LS 237

Query: 267 SNGKRALISVQKDEAMDIYSVD------LQSNATER---------LTNTLFINISASYSP 311
            N     I+ Q+D    I  V       +Q  + E+          +       S ++SP
Sbjct: 238 GNQLMPAINRQRDRIAFISDVTGNPDLFIQEFSPEKGGIGKPRHLFSARYATQGSPTFSP 297

Query: 312 DSSQIVFESDREGKEQLYVMQ--SNGSDQKRISQ------DKEASYFDPVWSPQGDLIAF 363
           D  ++ F S++ G  ++Y+M     G+  K I        ++E +   P WSP G  +A+
Sbjct: 298 DGFRLAFVSNKGGSPRVYLMNIPPQGTPLKEIEPILVTKVNRENT--APCWSPDGTKLAY 355

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              +     I V       ER L +   N + P+W+ +   ++++    G+   +LY I+
Sbjct: 356 CSKTKGVRQIWVYDLLTGVERQLTDGPRNKENPSWASNSLHIVYNTSDAGNC--ELYLIN 413

Query: 423 L 423
           L
Sbjct: 414 L 414


>gi|168704723|ref|ZP_02737000.1| putative exported protease [Gemmata obscuriglobus UQM 2246]
          Length = 1080

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 37/263 (14%)

Query: 202 NIRYLTPSRDQILFEP-----RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--IG 254
           +I++ + S+DQ++FE      +F P   K    T        V +++   DRA  R  + 
Sbjct: 268 DIKFPSASKDQLVFENGGYIYKFDPKTAKAEKVT--------VRILE---DRAGARGALT 316

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDS 313
           +    + A   S +GKRAL + + D    +++V      T  LT T   +  +  +SPD 
Sbjct: 317 DVSKSVTAFEVSPDGKRALFAARGD----VFTVPAGDGVTRNLTRTPGAHDRNPKWSPDG 372

Query: 314 SQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             + F SD  G+++++V  ++GS   K ++   +   ++  WSP    I    +  +K  
Sbjct: 373 KSVAFVSDATGEDEIHVGPADGSAPAKPVTSAADTYKYEIQWSPDSKKIL---WGDKKLR 429

Query: 373 IGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +  +  +  +  L+ +    +    TWSP  + + F R ++ DT  K+Y   L     T 
Sbjct: 430 LQFVDVETKKVTLVDQAKAWEVRDFTWSPDSKWVAFGR-QEVDTMPKVYLYSLETTKTTA 488

Query: 431 I-------NTPAYASDPQWVGFM 446
           +       NTP +++D +++ F+
Sbjct: 489 VTDGWYASNTPTFSADGKYLFFV 511



 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 22/146 (15%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D+Y+V        R+T+     +   +SPD S + F    +G  +++V+ + G + KR
Sbjct: 44  AGDLYTVPAAGGTARRITSHPGFEMFPRFSPDGSLVAFTGQYDGNTEVFVVPAVGGEPKR 103

Query: 341 IS------QDKEASYFDP-----VWSPQGDLI-------AFTKFSGEKFAIGVMKKDGSQ 382
           ++      +D+ +    P      W+P G  +       +F  F G+ F + V  + G  
Sbjct: 104 LTYTATLGRDEVSDRMGPNNVVIGWTPDGKSVLFRSRMRSFNDFVGQLFTVPV--EGGVP 161

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSR 408
           E L +        ++S  G  L ++R
Sbjct: 162 EELPLPRGGFA--SYSADGTKLAYNR 185


>gi|309790683|ref|ZP_07685234.1| peptidase S41 [Oscillochloris trichoides DG6]
 gi|308227277|gb|EFO80954.1| peptidase S41 [Oscillochloris trichoides DG6]
          Length = 1083

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 17/194 (8%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           RF +     L+ V +D   D++SV ++     RLT      +  + SPD S + F    E
Sbjct: 7   RFPTIHNDTLVFVCED---DLWSVGVEGGVARRLTANPGEALRPALSPDGSWLAFTGRDE 63

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKD 379
           G  ++YVM + G   +R++           W P G  I F+  + + FA    +  +   
Sbjct: 64  GVPEVYVMPAIGGPARRLTFLGAQRTQVVGWMPDGQTIIFSSEASQPFAGMSQLYAVPHQ 123

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLYSIDLNGRNETL 430
           G + RLL     +   ++ P G ++I         + R + G TG      +  G  + L
Sbjct: 124 GGEPRLLPTGPAVSM-SYGPHGAAVIARNVTDLARWKRYRGGRTGDLWVDPNGQGAWQRL 182

Query: 431 INTPAYASDPQWVG 444
           I+     + P W+G
Sbjct: 183 IHLDGNLAAPIWIG 196


>gi|171909807|ref|ZP_02925277.1| probable TolB protein [Verrucomicrobium spinosum DSM 4136]
          Length = 1009

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 7/157 (4%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVM 331
           + + K   M+IY++++     +RLT T   +    +S D S+I +    E  +  ++Y M
Sbjct: 214 LKIDKQYFMEIYTMNVDGTDVKRLTTTPGYDGGPFFSHDGSKICWRRFNEKGDIAEIYTM 273

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSG-EKFAIGVMKKDGSQE--RLLV 387
            ++GSDQK+I++    S+  P + P GD + FT   +G   F +  +   G  E  R+  
Sbjct: 274 NADGSDQKQITKLGAMSWA-PYFHPSGDYLIFTNNVNGFANFELYAVDAAGKHEPVRITT 332

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            D     P +SP G+ L ++  +     S+++  D N
Sbjct: 333 TDGFDGLPVFSPDGKKLSWTSGRTSGGASQIFLADWN 369



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 27/174 (15%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----------- 327
           D+  D++   L+  + +++T     +   + SPD  ++VF S+R    +           
Sbjct: 156 DQRYDLFLYSLKDKSLKQITREEGYDAEGAISPDGKRVVFASNRAAYSEPLSPADTERLK 215

Query: 328 --------LYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS--GEKFAIGV 375
                   +Y M  +G+D KR++       +D  P +S  G  I + +F+  G+   I  
Sbjct: 216 IDKQYFMEIYTMNVDGTDVKRLTT---TPGYDGGPFFSHDGSKICWRRFNEKGDIAEIYT 272

Query: 376 MKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           M  DGS ++ + +   +  AP + PSG  LIF+   +G    +LY++D  G++E
Sbjct: 273 MNADGSDQKQITKLGAMSWAPYFHPSGDYLIFTNNVNGFANFELYAVDAAGKHE 326


>gi|34556943|ref|NP_906758.1| translocation protein TolB [Wolinella succinogenes DSM 1740]
 gi|67461991|sp|Q7MA16|TOLB_WOLSU RecName: Full=Protein tolB; Flags: Precursor
 gi|34482658|emb|CAE09658.1| PUTATIVE TONB-INDEPENDENT PROTEIN-UPTAKE PROTEIN [Wolinella
           succinogenes]
          Length = 421

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 78/337 (23%), Positives = 140/337 (41%), Gaps = 36/337 (10%)

Query: 117 IKEGKDR--LRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDF 173
           +K G++   +  E RL+DV     +  K +  +    +  +AH ++ DI   I     D+
Sbjct: 95  VKAGREGSGILAELRLYDVNSGDSVFAKSYTVAREDRYPFVAHKMAIDINNYIKAPSIDW 154

Query: 174 NSRILFVS--------ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            +R + +S        + VV+        V+ +DG         R  I   P+++  QQ 
Sbjct: 155 MNRFVVLSKYTAPSESQIVVADYTLTFQNVIIKDG---------RLNIF--PKWANEQQD 203

Query: 226 VAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
             Y T Y  +  L  Y + T   R   +I     M++A   S++GK+ L+++      DI
Sbjct: 204 AIYYTKYLTKPTLFRYNLYTGESR---KITESEGMLVASDVSADGKKLLLTMAPHTQSDI 260

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D Q+   ++LT    I++SA +  D  +I+F SDR G   ++    +GS+   + Q 
Sbjct: 261 FLFDTQTGTRKQLTRYPGIDVSAHFIEDERRIMFISDRLGYPNVFATGLDGSET--VEQM 318

Query: 345 KEASYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                 +   S  G  I ++      +F    F + ++       R L  +   Q P +S
Sbjct: 319 VFHGRNNNAASAFGQYIVYSSRESSNEFDTNTFNLYLVSTKSDYIRRLTANGVNQMPRFS 378

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
             G ++++   K     S L  I LN     L   P+
Sbjct: 379 QDGETVMY--LKHNGAQSALGVIRLNYNKSYLFPLPS 413


>gi|254480026|ref|ZP_05093274.1| Amidohydrolase family protein [marine gamma proteobacterium
           HTCC2148]
 gi|214039588|gb|EEB80247.1| Amidohydrolase family protein [marine gamma proteobacterium
           HTCC2148]
          Length = 1082

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 14/140 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIYS+ ++      +T  +  +I   +SPD SQI F SDR+G + +++      D ++++
Sbjct: 73  DIYSLPIEGGKATAITQGMAWDIQPRFSPDGSQIAFISDRDGGDNVWLQDLGSGDSRQLT 132

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
            +      +P WSP G  IA  K         +GE +   V      + + +V   N   
Sbjct: 133 FESFRLLNNPSWSPDGQYIAARKHFTTSRSLGTGEIWLYHVDGNRSQKGQQIVARPNETF 192

Query: 394 -----APTWSPSGRSLIFSR 408
                 PT+S  G S+ FSR
Sbjct: 193 QKEQGEPTFSADGNSIYFSR 212



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 56/119 (47%), Gaps = 8/119 (6%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
           AS SPD S +VFES  E    LY+  S+  D KR++ DK   + + PVWSP    + F +
Sbjct: 374 ASRSPDGSAVVFESLGE----LYIKHSD-KDAKRLTSDKNEGFDYSPVWSPDSKSLYFMR 428

Query: 366 FSGEKFAI--GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           ++ +       V    G  +RL V        + SP G  L+F +         L+++D
Sbjct: 429 WNDQSLTSIRRVNANGGKSKRLTVPTGQYTELSVSPKGDQLLFRKIAASALLGSLHTVD 487


>gi|297845142|ref|XP_002890452.1| hypothetical protein ARALYDRAFT_472406 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336294|gb|EFH66711.1| hypothetical protein ARALYDRAFT_472406 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 706

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 140/357 (39%), Gaps = 57/357 (15%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
           L ++    Q++T P  +  F    S      +     + G D   VE  L+D+K R + I
Sbjct: 298 LTTESVTIQRVT-PPGVHAFTPATSPNNHEFIAVATRRPGSDYRHVE--LFDLK-RNEFI 353

Query: 141 GKKFFSSPASWRKIAHTISDDI---YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
                 +P S+        D     Y S  GE     S +LF+ E++ +     SL  +D
Sbjct: 354 ELTRLVAPKSYHLNPFLSPDSSRVGYHSCRGEANGRRSPLLFL-ENIQTTTTDLSLFRID 412

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--------DDEDILRVY---LMDTRI 246
                              P FSP   ++AY           D      VY      T  
Sbjct: 413 GS----------------FPSFSPGGDRIAYVKMPGVFVVKPDGSGQREVYNGMAFSTAW 456

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRA-LISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           D  P R G   S    P F++      +IS++ D A        +S++  RLT     N 
Sbjct: 457 D--PVRPGVVYSSS-GPTFATERTEVDVISIEVDAAD-------KSSSVRRLTTNGKNNA 506

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAF 363
               SPD  +IVF S R G + LY+M +   +   + +  E ++ D +  WSP G+ IAF
Sbjct: 507 FPWPSPDGKRIVFRSGRTGHKNLYIMDAEKGESGGLWRLTEGAWTDTMCNWSPDGEWIAF 566

Query: 364 -----TKFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDG 412
                +  SG  F + ++  +G+  R L++         P +SP  +SL+F+    G
Sbjct: 567 ASDRESPGSG-SFELFLIHPNGTGLRKLIQSGTGGRTNHPIFSPDSKSLVFTSDYAG 622


>gi|20090389|ref|NP_616464.1| TolB protein [Methanosarcina acetivorans C2A]
 gi|19915397|gb|AAM04944.1| TolB protein-like protein [Methanosarcina acetivorans C2A]
          Length = 577

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 108/239 (45%), Gaps = 23/239 (9%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           + + L ++DRDG  ++ LT + D++     +S + +K+AY+T   ED      +      
Sbjct: 176 LNDQLYLIDRDGYVLQKLTDTSDRVE-TAIWSNDGKKIAYSTGQTEDEETGLWIINENGT 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             KR+ N   +++   +S +  R       DE   +YS+ +      +L+   F      
Sbjct: 235 ENKRLDN--GIVIG--WSPDDSRIY---YVDENFSLYSIKVDGTDRFQLSTKSFSRNEDV 287

Query: 308 -SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD   ++F +  +    +++  S G + + + +      F P WSP+GD IAFT+ 
Sbjct: 288 FSFSPDRKSLIFSTVNDEGVTMFLTDSTGKNVQVLEEFSGRCVFKPSWSPKGDKIAFTQG 347

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL-------IFSRKKDGDTGSKL 418
           +     +  +  DG+ ++L+   S +    W PSG  +       +F    DG T  +L
Sbjct: 348 TD----LHTINPDGTGKKLI--SSAITDYEWHPSGDFISFIASDSVFVASPDGSTKIQL 400


>gi|126664003|ref|ZP_01734997.1| WD40-like beta Propeller [Flavobacteria bacterium BAL38]
 gi|126623952|gb|EAZ94646.1| WD40-like beta Propeller [Flavobacteria bacterium BAL38]
          Length = 518

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 22/168 (13%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIY  DL  N T++LTNT   +  A  SPD  +I F S R G  ++Y M  +G++ K+I
Sbjct: 138 FDIYIADLNGNITKQLTNTPGYDAEAVVSPDGKKIAFTSIRSGDLEIYTMDIDGTNLKQI 197

Query: 342 ------------SQDKEASYF---DPVWSPQ----GDLIAFTKFSGEKFAIGVMKKDGSQ 382
                       S D +   F    P  + +     DL+A    +  +  I     DGS 
Sbjct: 198 TYGLGYDGGCFFSHDSKKIVFRSSRPKTAEEVKDYKDLLAQNLVAPSEMEIYTCNIDGSD 257

Query: 383 ERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGS--KLYSIDLNGRN 427
            + +        AP + PS + +IFS       G   +L+ ID+ G N
Sbjct: 258 LKQITHLGKANWAPYFHPSDKKIIFSSNHHSTRGYDFQLFMIDITGEN 305



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 61/265 (23%), Positives = 111/265 (41%), Gaps = 35/265 (13%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYAT 230
           +FN + L   + V +G  + +      DG +I Y  T + D     P   P + K  +A 
Sbjct: 79  EFNEKSL---QLVSTGKGRTTCSYYMPDGKHILYASTHASDHACPAPP-KPIEGKYLWAI 134

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           Y + DI   Y+ D       K++ N          S +GK+   +  +   ++IY++D+ 
Sbjct: 135 YPEFDI---YIADLN-GNITKQLTNTPGYDAEAVVSPDGKKIAFTSIRSGDLEIYTMDID 190

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDR--------------------EGKEQLYV 330
               +++T  L  +    +S DS +IVF S R                      + ++Y 
Sbjct: 191 GTNLKQITYGLGYDGGCFFSHDSKKIVFRSSRPKTAEEVKDYKDLLAQNLVAPSEMEIYT 250

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEKFAIGVMKKDGSQERLL 386
              +GSD K+I+   +A++  P + P    I F+       G  F + ++   G   + +
Sbjct: 251 CNIDGSDLKQITHLGKANW-APYFHPSDKKIIFSSNHHSTRGYDFQLFMIDITGENLQQI 309

Query: 387 VEDSNLQA-PTWSPSGRSLIFSRKK 410
             +S   A P +SP G+ L+FS  +
Sbjct: 310 TWESEFNAFPMFSPDGKKLVFSSNR 334


>gi|120596842|ref|YP_961416.1| amidohydrolase [Shewanella sp. W3-18-1]
 gi|120556935|gb|ABM22862.1| amidohydrolase [Shewanella sp. W3-18-1]
          Length = 1062

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 15/138 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +     + L   +   +   YSPD   I F SD +G + +++M ++G   + ++
Sbjct: 73  DIYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGDGGDNIWIMDADGKKPRTVT 132

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMKKDGSQERLLVEDSN--- 391
           ++       P WSP    L+A   F+       GE +   V   +G +   L E  N   
Sbjct: 133 KETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHVAGGEGVK---LTERPNDEK 189

Query: 392 -LQAPTWSPSGRSLIFSR 408
            L  P +SP GR + FS+
Sbjct: 190 DLGEPAYSPDGRYIYFSQ 207



 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 12/141 (8%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  SPD S++ FE+   GK  L  +  +G   +    DK  +   P WS  G  I FT +
Sbjct: 369 AQVSPDGSKVTFEA--LGKIWLKSL-PDGKMSRLTELDKNIAELYPQWSRDGKNIVFTTW 425

Query: 367 SGE-KFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK------- 417
           + + +  + V+  K G  ++L  E      PT+SP+G  +++ + + G+   +       
Sbjct: 426 NDQDQGTVQVISAKGGKPKQLTSEPGKYVEPTFSPNGELVVYRKTQGGNLTPRTWSQEPG 485

Query: 418 LYSIDLNGRNETLINTPAYAS 438
           LY +D+ G+  + ++   Y +
Sbjct: 486 LYKVDIKGKQNSKLSADGYQA 506


>gi|146291120|ref|YP_001181544.1| amidohydrolase [Shewanella putrefaciens CN-32]
 gi|145562810|gb|ABP73745.1| amidohydrolase [Shewanella putrefaciens CN-32]
          Length = 1062

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 15/138 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +     + L   +   +   YSPD   I F SD +G + +++M ++G   + ++
Sbjct: 73  DIYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGDGGDNIWIMDADGKKPRTVT 132

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMKKDGSQERLLVEDSN--- 391
           ++       P WSP    L+A   F+       GE +   V   +G +   L E  N   
Sbjct: 133 KETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHVTGGEGVK---LTERPNDEK 189

Query: 392 -LQAPTWSPSGRSLIFSR 408
            L  P +SP GR + FS+
Sbjct: 190 DLGEPAYSPDGRYIYFSQ 207



 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 12/141 (8%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  SPD S++ FE+   GK  L  +  +G   +    DK  +   P WS  G  I FT +
Sbjct: 369 AQVSPDGSKVTFEA--LGKIWLKSL-PDGKMSRLTELDKNIAELYPQWSRDGKNIVFTTW 425

Query: 367 SGE-KFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK------- 417
           + + +  + V+  K G  ++L  E      PT+SP+G  +++ + + G+   +       
Sbjct: 426 NDQDQGTVQVISAKGGKPKQLTSEPGKYVEPTFSPNGELVVYRKTQGGNLTPRTWSQEPG 485

Query: 418 LYSIDLNGRNETLINTPAYAS 438
           LY  DL  +    I++  Y +
Sbjct: 486 LYKADLKTKQNKKISSDGYQA 506


>gi|319424426|gb|ADV52500.1| amidohydrolase [Shewanella putrefaciens 200]
          Length = 1062

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 15/138 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +     + L   +   +   YSPD   I F SD +G + +++M ++G   + ++
Sbjct: 73  DIYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGDGGDNIWIMDADGKKPRTVT 132

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMKKDGSQERLLVEDSN--- 391
           ++       P WSP    L+A   F+       GE +   V   +G +   L E  N   
Sbjct: 133 KETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHVTGGEGVK---LTERPNDEK 189

Query: 392 -LQAPTWSPSGRSLIFSR 408
            L  P +SP GR + FS+
Sbjct: 190 DLGEPAYSPDGRYIYFSQ 207



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 12/141 (8%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  SPD S++ FE+   GK  L  +  +G   +    DK  +   P WS  G  I FT +
Sbjct: 369 AQVSPDGSKVAFEA--LGKIWLKSL-PDGKMSRLTELDKNIAELYPQWSRDGKNIVFTTW 425

Query: 367 SGE-KFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK------- 417
           S + +  + V+  K G  ++L  E      PT+SP+G  +++ + + G+   +       
Sbjct: 426 SDQDQGTVQVISAKGGKPKQLTSEPGKYVEPTFSPNGELVVYRKTQGGNLTPRTWSQEPG 485

Query: 418 LYSIDLNGRNETLINTPAYAS 438
           LY +D+ G+  + I+   Y +
Sbjct: 486 LYKVDIKGKQNSKISADGYQA 506


>gi|254442939|ref|ZP_05056415.1| hypothetical protein VDG1235_1173 [Verrucomicrobiae bacterium
           DG1235]
 gi|198257247|gb|EDY81555.1| hypothetical protein VDG1235_1173 [Verrucomicrobiae bacterium
           DG1235]
          Length = 469

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 21/181 (11%)

Query: 246 IDRAPKRIGNFRSMIL-APRF----SSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTN 299
           I + P R G    + L  P F    S + K  + + ++    +I+         E +LT+
Sbjct: 282 IYKLPVRGGIPEQLTLQGPSFLHGWSPDNKYVIYTAERGGKWNIWRTTTDGKGEEAQLTD 341

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +  ++  + YSPD   I F S R G  Q++ M+++GS+ ++++ D+  ++F P  SP G 
Sbjct: 342 SPGLSDGSEYSPDGKYIYFNSTRSGLMQIWRMKADGSEPEQVTDDQYNNWF-PHLSPDGK 400

Query: 360 LIAFTKFSGE----------KFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLI 405
            + F  +  +             +  M   G   R++         +  P+WSP GR + 
Sbjct: 401 TLVFLSYGQDVEPANHPYYKHVFLRTMPVSGGAPRIVAYLYGGQGTINVPSWSPDGRKVA 460

Query: 406 F 406
           F
Sbjct: 461 F 461


>gi|332665943|ref|YP_004448731.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
 gi|332334757|gb|AEE51858.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
          Length = 1076

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 14/151 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDRE 323
            S  G+RAL     +   +I++V  ++     LT ++   +   ++SPD  +I + SD  
Sbjct: 314 LSPTGQRALF----EHRGEIFTVPKENGDWRNLTQSSGAADRFPAWSPDGQKIAWFSDAS 369

Query: 324 GKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI----GVMKK 378
           G+ QL +    G ++ R I+ +K   +F P WSP G  IA+T      + I    GV KK
Sbjct: 370 GEYQLMIGDQAGLEKPRAIAIEKPTFFFRPAWSPDGKYIAYTDTHLRLWYIDVASGVSKK 429

Query: 379 -DGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            D      +V   N   PTWSP  + + +SR
Sbjct: 430 VDNEPYAHVVRTMN---PTWSPDSKWIAYSR 457



 Score = 43.5 bits (101), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 16/111 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS +GK    + Q D   D++ +  +  A +RLT    +++   + PD   ++F S R
Sbjct: 69  PHFSPDGKTIAFTGQYDGNTDVFVLPTEGGAPKRLTWHPGVDVVQGWMPDGKSVLFRSGR 128

Query: 323 EG----KEQLYVMQSNGSDQK----------RISQDKEASYFDPV--WSPQ 357
            G      Q Y +   G  +K           IS++ + + + P+  W P+
Sbjct: 129 AGVPTRSNQFYSVPVEGGFEKMLPIPQAAFGEISENGQYAAYQPITFWDPE 179


>gi|284030771|ref|YP_003380702.1| WD40 domain-containing protein beta Propeller [Kribbella flavida
           DSM 17836]
 gi|283810064|gb|ADB31903.1| WD40 domain protein beta Propeller [Kribbella flavida DSM 17836]
          Length = 1043

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 7/148 (4%)

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +R T T   N   + SP+  ++ F+        ++V  + G   +R++ D + +   P W
Sbjct: 54  QRATLTEGTNFMVAVSPEGRRLAFDL----VTAIWVTPATGGSAQRLTDDLQDAT-RPRW 108

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           SP G  + F  +    F +  ++ DG S  +L     + + P ++P GRS++FS  + G+
Sbjct: 109 SPDGRRLVFQSYRDGNFHLWTIQPDGRSLRQLTTGRHDHREPHFTPDGRSIVFSSDRGGN 168

Query: 414 TGSKLYSIDLN-GRNETLINTPAYASDP 440
               ++ +DL+ G    L   PA  ++P
Sbjct: 169 GSYGIHRLDLSTGAIVALTEDPAEEAEP 196



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 4/132 (3%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D    I+       + +RLT+ L       +SPD  ++VF+S R+G   L+ +Q +G   
Sbjct: 78  DLVTAIWVTPATGGSAQRLTDDLQDATRPRWSPDGRRLVFQSYRDGNFHLWTIQPDGRSL 137

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQA-P 395
           ++++  +   + +P ++P G  I F+   G   + G+ + D S   +  L ED   +A P
Sbjct: 138 RQLTTGRH-DHREPHFTPDGRSIVFSSDRGGNGSYGIHRLDLSTGAIVALTEDPAEEAEP 196

Query: 396 TWSPSGRSLIFS 407
             SP GR + F+
Sbjct: 197 VVSPDGRRIAFT 208



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 5/143 (3%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           PR+S +G+R +    +D    ++++     +  +LT     +    ++PD   IVF SDR
Sbjct: 106 PRWSPDGRRLVFQSYRDGNFHLWTIQPDGRSLRQLTTGRHDHREPHFTPDGRSIVFSSDR 165

Query: 323 EGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            G     + + + S    ++  +  A   +PV SP G  IAFT  +     + +    G 
Sbjct: 166 GGNGSYGIHRLDLSTGAIVALTEDPAEEAEPVVSPDGRRIAFTVDTAAIVELDLAT--GV 223

Query: 382 QERLLVEDSNLQ--APTWSPSGR 402
           +  ++   + +    P +SPSG+
Sbjct: 224 RRTVVAAQTGITVFGPAYSPSGQ 246



 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 17/160 (10%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +P FSP+ + + YA+ D +    ++L D   +    ++ +      APRFS +G++  ++
Sbjct: 379 DPDFSPDGRSLLYAS-DRDGTADLWLHDL-ANGTDTKVSSLPGAQTAPRFSPDGRQ--VA 434

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------REGKEQ- 327
            Q  + +  + +DL S    +LT TLF     S+SPD   IV  +        REG  Q 
Sbjct: 435 YQDQDGI-AWMLDLGSGQVRQLTPTLFQPGRVSWSPDGRTIVLAAVKPFTKRFREGTSQL 493

Query: 328 LYVMQSNGSDQ--KRISQDKEASYFD--PVWSPQGDLIAF 363
           LYV  ++ S +  + +     A+  D  PV+SP G  +AF
Sbjct: 494 LYVDVASTSFEYVEPMPFRSLATRGDDGPVFSPDGRWLAF 533



 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 44/187 (23%), Positives = 81/187 (43%), Gaps = 17/187 (9%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALIS 275
           PR+SP+ +++ + +Y D +    +L   + D R+ +++   R     P F+ +G+  + S
Sbjct: 106 PRWSPDGRRLVFQSYRDGNF---HLWTIQPDGRSLRQLTTGRHDHREPHFTPDGRSIVFS 162

Query: 276 VQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             +  + +  I+ +DL + A   LT           SPD  +I F  D     +L +  +
Sbjct: 163 SDRGGNGSYGIHRLDLSTGAIVALTEDPAEEAEPVVSPDGRRIAFTVDTAAIVELDL--A 220

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSN 391
            G  +  ++     + F P +SP G L A  + SG      IG  K    Q+   V    
Sbjct: 221 TGVRRTVVAAQTGITVFGPAYSPSGQL-AHVRLSGPACDLVIGDAKVTSGQDVFAVP--- 276

Query: 392 LQAPTWS 398
              P+W+
Sbjct: 277 ---PSWA 280



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 12/154 (7%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           I +P  S +G+   +S +   A+ +   D ++   + + +  F N    +SPD   +++ 
Sbjct: 336 IASPTVSPDGR--WLSFRALNALWLAPTDGRARPRKIVADGYF-NSDPDFSPDGRSLLYA 392

Query: 320 SDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           SDR+G   L++   +NG+D K  S     +   P +SP G  +A+    G    I  M  
Sbjct: 393 SDRDGTADLWLHDLANGTDTKVSSL--PGAQTAPRFSPDGRQVAYQDQDG----IAWMLD 446

Query: 379 DGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKK 410
            GS +   +  +  Q    +WSP GR+++ +  K
Sbjct: 447 LGSGQVRQLTPTLFQPGRVSWSPDGRTIVLAAVK 480


>gi|262194670|ref|YP_003265879.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262078017|gb|ACY13986.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1609

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 63/266 (23%), Positives = 120/266 (45%), Gaps = 19/266 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + VVS  +  S+ + + DG     +    +  +   RFSP+ ++V   + D    +R++ 
Sbjct: 1283 QRVVSASLDGSVRIWNADGTGTPVVLRGHENEVLSTRFSPDGKRVVSGSMDKS--VRIWN 1340

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D      P  +   +S + A  FS +G+R L S   D+ + I+ +D  S     L    
Sbjct: 1341 SDG--SGRPTVLRGHQSWVTATSFSPDGQRVL-STSADQTVRIWELD-GSRDPVVLRGHN 1396

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             I +SAS+SPD  Q V  + R+G  +++   ++GS   RI  D   + +   +SP G  +
Sbjct: 1397 NIVVSASFSPD-GQRVASASRDGTVRVW--NADGSGASRIIPDHGEAVWSVSFSPDGRRL 1453

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            A +  S     +     +GS   L   +  + +  +SP G+ ++   K   D   ++++ 
Sbjct: 1454 A-SASSDRTIRVWNAHGNGSPVILRGHEDGITSVDFSPDGQRILSGSK---DKTIRIWNA 1509

Query: 422  DLNG------RNETLINTPAYASDPQ 441
            D +G      R +  ++T  ++ D Q
Sbjct: 1510 DGHGPPQILSRYKGAVHTAQFSPDGQ 1535



 Score = 49.3 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 16/191 (8%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            RFSP+ Q+VA A+ D    +R++ +D   +    R      M+ +  FS +G+R + S  
Sbjct: 983  RFSPDGQRVASASSD--ATVRIWRVDGAGETTVLR--GHSDMVTSVDFSPDGRR-VASAS 1037

Query: 278  KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D+++ ++  D      ER L     +  S  +SPD   +V  S+      + V  ++G+
Sbjct: 1038 RDKSVRVWRAD--GTGDERILIGHEGVVSSVRFSPDGRFLVSASE---DASVRVWNADGT 1092

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQA 394
               RI +D + +     +SP G  IA T  S +K  I +   DGS   L++   ++++  
Sbjct: 1093 GTPRIFRDHDEAVHSAEFSPDGARIAAT--SADK-TIRIWNADGSGTPLVLRGHEADVWT 1149

Query: 395  PTWSPSGRSLI 405
              +SP G+ L+
Sbjct: 1150 ARFSPDGKRLV 1160



 Score = 41.6 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 120/262 (45%), Gaps = 33/262 (12%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + + DG+    +    +  ++  RFSP+ +++   +YD  + +R++  +T     P  + 
Sbjct: 1128 IWNADGSGTPLVLRGHEADVWTARFSPDGKRLVSTSYD--NTMRIW--NTDGSATPLVLR 1183

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                 ++A  FS +G+R ++S   D ++ I++ D          +  ++ +  ++SPD +
Sbjct: 1184 GHEVAVVAADFSPDGQR-VVSASYDNSVRIWNADGTGTPLSLRGHDDWV-MDVAFSPDGA 1241

Query: 315  QIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW----SPQGDLIAFTKFSGE 369
             +V  S D+  +    +  S+ SD+  + +     + D VW    SP G  +      G 
Sbjct: 1242 HVVSASMDKSAR----IWPSHSSDELVVLR----GHLDQVWSADFSPDGQRVVSASLDG- 1292

Query: 370  KFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR- 426
              ++ +   DG+   +++   ++ + +  +SP G+ ++       D   ++++ D +GR 
Sbjct: 1293 --SVRIWNADGTGTPVVLRGHENEVLSTRFSPDGKRVV---SGSMDKSVRIWNSDGSGRP 1347

Query: 427  -----NETLINTPAYASDPQWV 443
                 +++ +   +++ D Q V
Sbjct: 1348 TVLRGHQSWVTATSFSPDGQRV 1369



 Score = 38.9 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 42/163 (25%), Positives = 71/163 (43%), Gaps = 19/163 (11%)

Query: 171  GDFNSRILFVSESVVSGII-------------KNSLCVMDRDGANIRYLTPSRDQILFEP 217
            G  + RIL   E VVS +                S+ V + DG     +    D+ +   
Sbjct: 1049 GTGDERILIGHEGVVSSVRFSPDGRFLVSASEDASVRVWNADGTGTPRIFRDHDEAVHSA 1108

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+  ++A AT  D+ I R++  D      P  +    + +   RFS +GKR L+S  
Sbjct: 1109 EFSPDGARIA-ATSADKTI-RIWNADG--SGTPLVLRGHEADVWTARFSPDGKR-LVSTS 1163

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
             D  M I++ D  +       + + + ++A +SPD  ++V  S
Sbjct: 1164 YDNTMRIWNTDGSATPLVLRGHEVAV-VAADFSPDGQRVVSAS 1205


>gi|226227728|ref|YP_002761834.1| tricorn protease [Gemmatimonas aurantiaca T-27]
 gi|226090919|dbj|BAH39364.1| tricorn protease [Gemmatimonas aurantiaca T-27]
          Length = 1113

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 80/186 (43%), Gaps = 16/186 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDRE 323
            S+ GKRA +  + +    ++++  +      LTN+     I+  +SPD   I + SDR 
Sbjct: 321 LSATGKRAAVEARGE----VFTIPAEKGDVRNLTNSSASAEIAPIWSPDGKSIAWFSDRS 376

Query: 324 GKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           G+ QL +    G    R I   + +  + P WSP G  IAF       F I ++     +
Sbjct: 377 GEYQLVIAPQEGVGATREIVLPEPSRPYSPSWSPDGKTIAFQD---THFRIWLVDVASGK 433

Query: 383 ERLLVEDSNLQ-----APTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETLINTPAY 436
            ++   D          P WSP  R L + ++ K       +Y ++  G  + L +  A 
Sbjct: 434 AKVADTDPYFMMDRSIVPVWSPDSRCLAYPKRLKSLLRAIFVYEVE-TGAVKQLTDGMAD 492

Query: 437 ASDPQW 442
           AS+P W
Sbjct: 493 ASNPAW 498



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 38/78 (48%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           R   A +R+ +F+ +   P+ S +G++   S +     D+Y V ++     RLT     +
Sbjct: 59  RAGGAARRLTSFQGVTQNPKLSPDGRQVAFSAEYAGNTDVYVVPVEGGQPTRLTWHPSAD 118

Query: 305 ISASYSPDSSQIVFESDR 322
           +   ++PD   +VF S R
Sbjct: 119 VVQGWTPDGKSVVFASPR 136



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 1/84 (1%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A +I+ V+    A  RLT+   +  +   SPD  Q+ F ++  G   +YV+   G    R
Sbjct: 51  ANNIWVVERAGGAARRLTSFQGVTQNPKLSPDGRQVAFSAEYAGNTDVYVVPVEGGQPTR 110

Query: 341 ISQDKEASYFDPVWSPQGDLIAFT 364
           ++    A      W+P G  + F 
Sbjct: 111 LTWHPSADVVQ-GWTPDGKSVVFA 133


>gi|56459714|ref|YP_154995.1| hypothetical protein IL0605 [Idiomarina loihiensis L2TR]
 gi|56178724|gb|AAV81446.1| Uncharacterized conserved secreted protein [Idiomarina loihiensis
           L2TR]
          Length = 1058

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 9/135 (6%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY +       E+L   +  ++   YSP+   I F SD+ G + ++VM ++G++ + ++
Sbjct: 69  DIYRMPFGGGEAEKLIGGIAWHMQPVYSPNGRYIAFTSDQGGGDNIWVMDADGNNVRAVT 128

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFSGEK----FAIGVMKKDGSQERLLVEDSN----LQ 393
           ++       P WSP  + L+A   F+  +      + +  + G     L E  N    L 
Sbjct: 129 EETFRLLNSPAWSPDSEFLVARKHFTASRSLGAGEVWMYHRSGGSGVQLTERPNDQKDLG 188

Query: 394 APTWSPSGRSLIFSR 408
            P +SP G+ + FS+
Sbjct: 189 EPAFSPDGKYIYFSQ 203



 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 92/207 (44%), Gaps = 25/207 (12%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +Y M      A K IG   +  + P +S NG+    +  +    +I+ +D   N    +T
Sbjct: 70  IYRMPFGGGEAEKLIGGI-AWHMQPVYSPNGRYIAFTSDQGGGDNIWVMDADGNNVRAVT 128

Query: 299 NTLFINI-SASYSPDSSQIV----FESDRE-GKEQLYVMQSNGSDQKRISQ--DKEASYF 350
              F  + S ++SPDS  +V    F + R  G  ++++   +G    ++++  + +    
Sbjct: 129 EETFRLLNSPAWSPDSEFLVARKHFTASRSLGAGEVWMYHRSGGSGVQLTERPNDQKDLG 188

Query: 351 DPVWSPQGDLIAFTK--FSGEKFAI------GVM------KKDGSQERLLVEDSNLQAPT 396
           +P +SP G  I F++    G+ F        G+       ++ G  E L+        PT
Sbjct: 189 EPAFSPDGKYIYFSQDDTPGKTFHYSKDSLEGIYDIKRFERETGEIETLISGAGGAIRPT 248

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            SP GR L + +++D D  S LY +DL
Sbjct: 249 PSPDGRYLAYIKREDFD--SVLYVLDL 273


>gi|115377195|ref|ZP_01464407.1| peptidase M28 [Stigmatella aurantiaca DW4/3-1]
 gi|310821212|ref|YP_003953570.1| peptidase m28 [Stigmatella aurantiaca DW4/3-1]
 gi|115365778|gb|EAU64801.1| peptidase M28 [Stigmatella aurantiaca DW4/3-1]
 gi|309394284|gb|ADO71743.1| Peptidase M28 [Stigmatella aurantiaca DW4/3-1]
          Length = 927

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 89/208 (42%), Gaps = 30/208 (14%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +A YD  D+ +     + + R  +  G      +  +  S     + +  +D  +D+Y +
Sbjct: 134 WALYDSYDVFKANADGSGVTRLTETPGYDAEGTVCAKDGS----IIFTSTRDGDIDLYRM 189

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESD--REGKE------------------Q 327
           D       RLTNT   +  A ++ D S+IV+ +   R GKE                  +
Sbjct: 190 DKDGGNVRRLTNTPGYDGGAFFNADCSKIVWRASRPRPGKELEDYQGLLARGLVRPSKLE 249

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQ- 382
           LYV  ++GS+ K+I+    AS F P + P G  I F+       G +F I  +  DGS  
Sbjct: 250 LYVANADGSEAKQITWLNAAS-FAPFFHPNGQRILFSSNYGDPKGREFDIWAVNVDGSNL 308

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           ER+         P +SP G+ L FS  +
Sbjct: 309 ERITTAPGFDGFPMFSPDGKWLAFSSNR 336



 Score = 43.5 bits (101), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 31/196 (15%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++ D++  +   +   RLT T   +   +       I+F S R+G   LY M  +G + +
Sbjct: 138 DSYDVFKANADGSGVTRLTETPGYDAEGTVCAKDGSIIFTSTRDGDIDLYRMDKDGGNVR 197

Query: 340 RISQDK---EASYFDP-----VWSP------------QGDLIAFTKFSGEKFAIGVMKKD 379
           R++        ++F+      VW              QG L+A       K  + V   D
Sbjct: 198 RLTNTPGYDGGAFFNADCSKIVWRASRPRPGKELEDYQG-LLARGLVRPSKLELYVANAD 256

Query: 380 GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK--LYSIDLNGRNETLINT--- 433
           GS+ + +   ++   AP + P+G+ ++FS       G +  +++++++G N   I T   
Sbjct: 257 GSEAKQITWLNAASFAPFFHPNGQRILFSSNYGDPKGREFDIWAVNVDGSNLERITTAPG 316

Query: 434 ----PAYASDPQWVGF 445
               P ++ D +W+ F
Sbjct: 317 FDGFPMFSPDGKWLAF 332



 Score = 43.5 bits (101), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 21/148 (14%)

Query: 196 MDRDGANIRYL--TPSRDQILF-----------EPRFSPNQQKVAYATYDDEDILRVYLM 242
           MD+DG N+R L  TP  D   F             R  P ++   Y       ++R   +
Sbjct: 189 MDKDGGNVRRLTNTPGYDGGAFFNADCSKIVWRASRPRPGKELEDYQGLLARGLVRPSKL 248

Query: 243 DTRIDRA----PKRIGNFRSMILAPRFSSNGKRALISVQ----KDEAMDIYSVDLQSNAT 294
           +  +  A     K+I    +   AP F  NG+R L S      K    DI++V++  +  
Sbjct: 249 ELYVANADGSEAKQITWLNAASFAPFFHPNGQRILFSSNYGDPKGREFDIWAVNVDGSNL 308

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDR 322
           ER+T     +    +SPD   + F S+R
Sbjct: 309 ERITTAPGFDGFPMFSPDGKWLAFSSNR 336


>gi|189460182|ref|ZP_03008967.1| hypothetical protein BACCOP_00819 [Bacteroides coprocola DSM 17136]
 gi|189433043|gb|EDV02028.1| hypothetical protein BACCOP_00819 [Bacteroides coprocola DSM 17136]
          Length = 1116

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 22/140 (15%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD  +IVF      K  +Y +++ G +  R+ SQD   S  +PVWSP G  IAF     
Sbjct: 62  SPDGKEIVFCY----KGDIYKVKAAGGEAVRLTSQDSYES--NPVWSPDGKQIAFASDRF 115

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRK-----------KDGDTGS 416
             F + +M  DG   + L  +S  + P T++P G+ ++FS             K G T  
Sbjct: 116 GNFDLFIMPADGGTAKRLTMNSASEIPSTFTPDGKYVVFSASIQDPASSALFPKSGMT-- 173

Query: 417 KLYSIDL-NGRNETLINTPA 435
           +LY + +  GR + ++ TPA
Sbjct: 174 ELYKVPVAGGRTQQMLGTPA 193



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V        RLT+      +  +SPD  QI F SDR G   L++M ++G   KR++
Sbjct: 75  DIYKVKAAGGEAVRLTSQDSYESNPVWSPDGKQIAFASDRFGNFDLFIMPADGGTAKRLT 134

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
            +  AS     ++P G  + F+
Sbjct: 135 MNS-ASEIPSTFTPDGKYVVFS 155



 Score = 43.5 bits (101), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 72/335 (21%), Positives = 139/335 (41%), Gaps = 45/335 (13%)

Query: 149 ASWRKIAHT--ISDDI--YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
           + WRK  HT  I+ D+  Y + TG+  +           V+S   K    + +R+G +  
Sbjct: 215 SEWRK-HHTSSITRDVWMYDTKTGKHTNLTEVAGEDRNPVLSPDGKQVYFLSERNGGSFN 273

Query: 205 -YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-----DRAPKRIG---- 254
            Y  P  +    +P  S     V + +  ++  L  Y  D  I     D  PK++     
Sbjct: 274 VYRFPLDNPKEIQPVTSFKTNPVRFLSMGNDGTL-CYTYDGEIYTQPVDGKPKKVAVSLV 332

Query: 255 -NFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNATERLTNTLFINISAS 308
            +   + ++  F+     A++S    +       +++   ++   T+++T+T       S
Sbjct: 333 RDDEELPVSYSFTRGASEAVVSPDGKQVAFIVRGEVFVTSVEYGTTKQITHTPEAERGLS 392

Query: 309 YSPDSSQIVFESDREGKEQLYVMQ---------SNGS--DQKRISQDKEASYFDPVWSPQ 357
           +  D+  +V+ S+R GK  LY+ +          N +  +++ +  DK+     P +SP 
Sbjct: 393 FGADNRSLVYSSERNGKRDLYIAKISRKEDLNFPNATLIEEEPLIHDKKLERDYPQFSPD 452

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------TWSPSGR--SLIF-SR 408
           G  +AF +   ++  + V+  D  + R + + S           +WSP G+  +L F   
Sbjct: 453 GKEVAFIE---DRNRLMVVNLDTKKVRQVTDGSTWYTRSGGFDYSWSPDGKWFTLEFIGN 509

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           K D  +   L S D  G+   L N+   +  P+WV
Sbjct: 510 KHDPYSDIGLVSADGKGQIINLTNSGYTSGSPRWV 544


>gi|297181851|gb|ADI18030.1| periplasmic component of the tol biopolymer transport system
           [uncultured delta proteobacterium HF0200_19J16]
          Length = 428

 Score = 55.1 bits (131), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/297 (22%), Positives = 122/297 (41%), Gaps = 36/297 (12%)

Query: 130 LWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           +W    ++ +  K F   +    R++   +SD   ++     G   SRI + ++ +    
Sbjct: 115 IWSQGKKEAVASKTFKLENERDIRELGLAVSDWFVENTLQFNGVATSRIAYTAQKINR-- 172

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--YDDEDILRVYLMDTRI 246
            + ++ +   DG  I+             RFS N     +++  +D+++IL      ++ 
Sbjct: 173 -RKNIMLSSYDGTVIQ-------------RFSYNLGSNNFSSWSFDNKNILYTTFTRSKA 218

Query: 247 DRAPKRIGNFRSMILA---------PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             A +     RS ILA           +  +GK  L+++ K    DIYS +L     + L
Sbjct: 219 QLAIQPSIRLRSKILAFPVGSQPLGASWHPDGKSILLTLMKQGNADIYSYNLSDAKLQSL 278

Query: 298 TNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            N   +  S   SPD  +I F SD     + Q+Y+        +RI+     +   P WS
Sbjct: 279 FNWKSLETSPHMSPDGKKIAFVSDTAYPRRPQIYIHNLATEKTERITFKGNYNS-SPKWS 337

Query: 356 PQGDLIAFTKFSGEKFAI---GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           P    + + +     F +    ++ +   Q     +DS  + P WSP+G+ +IFS K
Sbjct: 338 PDSTKLVYERQKKNIFQLYKYNLLTRRHVQLTFGRDDS--EKPDWSPNGKQIIFSAK 392



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 16/176 (9%)

Query: 193 LCVMDRDGANIRY--LTPSRDQILFE-------PRFSPNQQKVAYAT---YDDEDILRVY 240
           L +M +  A+I    L+ ++ Q LF        P  SP+ +K+A+ +   Y     + ++
Sbjct: 255 LTLMKQGNADIYSYNLSDAKLQSLFNWKSLETSPHMSPDGKKIAFVSDTAYPRRPQIYIH 314

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + T         GN+ S   +P++S +  + +   QK     +Y  +L +    +LT  
Sbjct: 315 NLATEKTERITFKGNYNS---SPKWSPDSTKLVYERQKKNIFQLYKYNLLTRRHVQLTFG 371

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWS 355
              +    +SP+  QI+F +  +   +LY + S G    R+++     S  +PVWS
Sbjct: 372 RDDSEKPDWSPNGKQIIFSAKTKKVPKLYYISSFGGRTIRVTKTLPNISETNPVWS 427


>gi|168057343|ref|XP_001780675.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667943|gb|EDQ54561.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 710

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 29/196 (14%)

Query: 217 PRFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA--- 272
           P  SP+   V++  + +D   L V  +D   +R   R     S +   R+   GK     
Sbjct: 390 PSISPDGSLVSFVDSGNDSSTLAVMKLDGSENRVIHR-----SNVFGERWDPKGKTIYAS 444

Query: 273 -------------LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                        ++++Q  +  D+ + +   N           N     SPD   +VF 
Sbjct: 445 QGRVFASVKTVVRIVAIQDSDTADLGADETSHNYKYLTKEGTGNNAFPCPSPDGKYVVFR 504

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFT----KFSGEK-FA 372
           S R G++ LY+M + G ++K + +  E  + D  P WSP  + IAF+      +GE+ F+
Sbjct: 505 SGRTGRKNLYIMDAAGGEEKYLRRLTEGRWRDTMPAWSPDNEWIAFSSNRAHPTGERSFS 564

Query: 373 IGVMKKDGSQERLLVE 388
           + +++ +G+   +L++
Sbjct: 565 LYLIRPNGTDLHMLLD 580


>gi|329889101|ref|ZP_08267444.1| mdsD protein [Brevundimonas diminuta ATCC 11568]
 gi|328844402|gb|EGF93966.1| mdsD protein [Brevundimonas diminuta ATCC 11568]
          Length = 1090

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 10/135 (7%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +       + + +  ++   YSPD   I F SDR G + L+VM  +GS+ +++S
Sbjct: 74  DIYVMPIGGGEARPIASGVAWDMQPRYSPDGRFIAFTSDRAGGDNLWVMDRDGSNPRQVS 133

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVM----KKDGSQERLLVEDSNLQ--- 393
            +       P W+P    I   K   S      G M    +  G     L E    Q   
Sbjct: 134 SETFRLLNSPAWTPDSQFIVGRKHFTSSRSLGAGEMWMYHRSGGGSGVQLTERRTQQKDT 193

Query: 394 -APTWSPSGRSLIFS 407
             P +SP GR + FS
Sbjct: 194 GEPAFSPDGRYMYFS 208



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 29/196 (14%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIV-- 317
           + PR+S +G+    +  +    +++ +D   SN  +  + T  +  S +++PDS  IV  
Sbjct: 96  MQPRYSPDGRFIAFTSDRAGGDNLWVMDRDGSNPRQVSSETFRLLNSPAWTPDSQFIVGR 155

Query: 318 --FESDRE---GKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             F S R    G+  +Y     GS     +R +Q K+    +P +SP G  + F+  S  
Sbjct: 156 KHFTSSRSLGAGEMWMYHRSGGGSGVQLTERRTQQKDTG--EPAFSPDGRYMYFSDESTP 213

Query: 370 KFAIGVMKKDGSQ----ERLLVEDSNLQA----------PTWSPSGRSLIFSRKKDGDTG 415
                  K   +Q     RL  E   ++           PT SP G+SL F R+      
Sbjct: 214 GGVFEYSKDPNTQLYVIRRLDRETGEIKPFVTGPGGSVRPTPSPDGKSLAFVRRDRYQ-- 271

Query: 416 SKLYSIDLNGRNETLI 431
           S LY +DL    ET I
Sbjct: 272 STLYVMDLESGRETPI 287



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 9/119 (7%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQ-SNG--SDQKRISQDKEASYFDPVWSPQGDLIAF 363
           A  SPD S++VFE+       L+V    NG     +R+++  +     P WS  G  I +
Sbjct: 371 AQTSPDGSKVVFEA----LGNLWVRDLRNGVAGTPRRLTRQSDHFELYPSWSRDGRSIVY 426

Query: 364 TKFSGEKF-AIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           T ++ E   +I V+   G + R +  +  +   P +SP G+++++    DG   S ++S
Sbjct: 427 TTWNDENLGSIRVVPVAGGEGRTITTNPGHYLEPRFSPDGQTVVYRTSSDGYLRSAMWS 485


>gi|221195922|ref|ZP_03568969.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Burkholderia multivorans CGD2M]
 gi|221202595|ref|ZP_03575614.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Burkholderia multivorans CGD2]
 gi|221176529|gb|EEE08957.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Burkholderia multivorans CGD2]
 gi|221182476|gb|EEE14876.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Burkholderia multivorans CGD2M]
          Length = 675

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 108/251 (43%), Gaps = 69/251 (27%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILF-----EPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           +++L ++D DG       P R Q+ F      PR+ P +Q +A+ + D     +++ + T
Sbjct: 43  RSALWLVDIDGGR-----PPR-QLTFGNADSHPRWCPGEQALAFLS-DRGSGRQIHAIRT 95

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKR--ALISV------------QKDEAMD------- 283
               A +R+ +  S +++  +S +GK+  AL ++              DEA D       
Sbjct: 96  DGGEA-RRVTDLPSGVMSFEWSPDGKQLLALCTIAADPEQRGNTHGDSDEAADRPADAPR 154

Query: 284 ---------------------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
                                ++++D Q+ A+ RLT   F    A +SPD  +I F   R
Sbjct: 155 VVWRLPYKLDGVGYTLDTEIHLHTIDAQTGASRRLTRGSFEVSEADWSPDGQRIAFTRTR 214

Query: 323 EG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           +G    +  ++V+ ++G + ++++    ++ F P WSP G  IA          IG    
Sbjct: 215 DGRFAHRTDVWVVDADGGNARQLTSTIASAAF-PRWSPDGRFIAL---------IGSEHD 264

Query: 379 DGSQERLLVED 389
             +Q RL + D
Sbjct: 265 GDAQMRLWLHD 275



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 100/241 (41%), Gaps = 13/241 (5%)

Query: 210 RDQILFEPRFSPNQQKVAYATYD-DEDILR--VYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           RD +  + RF  +      +T D D D  R  ++L+D    R P+++  F +    PR+ 
Sbjct: 14  RDIVDLQCRFEGDLAVCELSTPDRDADDYRSALWLVDIDGGRPPRQL-TFGNADSHPRWC 72

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
              +       +     I+++        R+T+     +S  +SPD  Q++         
Sbjct: 73  PGEQALAFLSDRGSGRQIHAIRTDGGEARRVTDLPSGVMSFEWSPDGKQLLALCTIAADP 132

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWS-P-QGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +        SD+   + D+ A     VW  P + D + +T    E     +  + G+  R
Sbjct: 133 EQRGNTHGDSDE---AADRPADAPRVVWRLPYKLDGVGYT-LDTEIHLHTIDAQTGASRR 188

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK--LYSIDLNGRN-ETLINTPAYASDPQ 441
           L      +    WSP G+ + F+R +DG    +  ++ +D +G N   L +T A A+ P+
Sbjct: 189 LTRGSFEVSEADWSPDGQRIAFTRTRDGRFAHRTDVWVVDADGGNARQLTSTIASAAFPR 248

Query: 442 W 442
           W
Sbjct: 249 W 249


>gi|284040547|ref|YP_003390477.1| peptidase S41 [Spirosoma linguale DSM 74]
 gi|283819840|gb|ADB41678.1| peptidase S41 [Spirosoma linguale DSM 74]
          Length = 1097

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 100/253 (39%), Gaps = 41/253 (16%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-- 264
           TP+      EP  SP+  ++A+ +  D            I   P   G  R ++  P   
Sbjct: 29  TPTPKFAYAEPSLSPDGAEIAFVSGGD------------IWTVPAAGGEARLLVSHPDNE 76

Query: 265 ----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S +GK       +    D+Y + L++  T+RLT      +  ++S D   I F+S
Sbjct: 77  SRPLYSPDGKYLAFVSSRTGNGDVYLLTLETGTTKRLTYDDGAEVLNAWSRDGKMIYFQS 136

Query: 321 ---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---FSGEKFAIG 374
              D  G   +Y +  NG     I+ D+ A+ F    SP G  +AF+     S + +  G
Sbjct: 137 TAKDISGMNDIYRVSVNGGTPMAITADRYANEFYSAPSPDGKTLAFSARGIASNQWWRKG 196

Query: 375 VMKKDGSQERLLVEDSNLQA---------------PTWSPSGRSLIFSRKKDGDTGSKLY 419
               D S+  LL  D+   A               P WS  G++L +    D   G  L+
Sbjct: 197 HSHLDESEIWLLHTDAKKAATAYERLTEGGAKELWPMWSADGKALFYV--SDRTRGQNLW 254

Query: 420 SIDLNGRNETLIN 432
           ++ L G+   L +
Sbjct: 255 TLPLGGKPTMLTS 267



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 20/233 (8%)

Query: 207 TPSRDQILFEPRF-----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           +P+ D++    +F     SP+ +KVA+  + +     V+   T+      RI    +   
Sbjct: 316 SPAVDRLKLTNQFRELALSPDGKKVAFVAHGE-----VFAASTKDGGDATRISTSAANES 370

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            P ++ N +  +   Q+D A  +Y  D  +    RLT+    + S  +SPD   + +   
Sbjct: 371 QPVWTPNSRSLVYVSQRDGAAHLYRYDFATRDETRLTDGALDDSSPVFSPDGKSLAYV-- 428

Query: 322 REGKEQLYVMQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVM 376
           R G+E   +  +   D    +  + +    S    VWSP G  IAF  +  + F  I V+
Sbjct: 429 RNGQELRVLDIATKKDRLLKKAYLGRPPFGSNGAVVWSPDGKWIAFASYGAKTFRNISVI 488

Query: 377 KKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              G + + +   +N      TWSP G+ ++FS  +  +T +++  IDL  R+
Sbjct: 489 PAIGGESKPVSFLANTFGGNVTWSPDGKYILFSTTQRTET-AQIARIDLVPRS 540



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 22/245 (8%)

Query: 201 ANIRYLTPSRD--QILFEPRFSPNQQ--KVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           AN  Y  PS D   + F  R   + Q  +  ++  D+ +I  ++    +   A +R+   
Sbjct: 166 ANEFYSAPSPDGKTLAFSARGIASNQWWRKGHSHLDESEIWLLHTDAKKAATAYERLTEG 225

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSS 314
            +  L P +S++GK       +    +++++ L    T     +N   +  S SY  D  
Sbjct: 226 GAKELWPMWSADGKALFYVSDRTRGQNLWTLPLGGKPTMLTSFSNGRVLWPSISY--DGK 283

Query: 315 QIVFESD---------REGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFT 364
            IVFE D          +    L V     +    + + K  + F +   SP G  +AF 
Sbjct: 284 SIVFERDFQLWKYDVASKQTAPLSVKLRGVAASPAVDRLKLTNQFRELALSPDGKKVAFV 343

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              GE FA    K  G   R+    +N   P W+P+ RSL++  ++DG   + LY  D  
Sbjct: 344 AH-GEVFAAST-KDGGDATRISTSAANESQPVWTPNSRSLVYVSQRDG--AAHLYRYDFA 399

Query: 425 GRNET 429
            R+ET
Sbjct: 400 TRDET 404


>gi|24371617|ref|NP_715659.1| amidohydrolase [Shewanella oneidensis MR-1]
 gi|24345370|gb|AAN53104.1|AE015453_6 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 1049

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 15/138 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +     + L   +   +   YSP+   I F SD +G + +++M ++GS+ + ++
Sbjct: 60  DIYQIPVTGGEAKPLAQGISWQMQPVYSPNGKHIAFTSDADGGDNIWIMNADGSNPRTVT 119

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMKKDGSQERLLVEDSN--- 391
            +       P WSP    LI    F+       GE +   V   +G +   L E  N   
Sbjct: 120 SETFRLLNSPAWSPDSQYLIGRKHFTASRSLGAGEVWLYHVAGGEGVK---LTERPNDEK 176

Query: 392 -LQAPTWSPSGRSLIFSR 408
            L  P +SP GR + FS+
Sbjct: 177 DLGEPAYSPDGRYIYFSQ 194



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 24/185 (12%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIV-- 317
           + P +S NGK    +   D   +I+ ++   +    +T+  F  + S ++SPDS  ++  
Sbjct: 82  MQPVYSPNGKHIAFTSDADGGDNIWIMNADGSNPRTVTSETFRLLNSPAWSPDSQYLIGR 141

Query: 318 --FESDRE-GKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTK--FSGEK 370
             F + R  G  ++++    G +  ++++  + E    +P +SP G  I F++    G+ 
Sbjct: 142 KHFTASRSLGAGEVWLYHVAGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKT 201

Query: 371 FAI------GVMK------KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           F        G+ K      K G+ E L+        PT SP G  L + ++ D    S L
Sbjct: 202 FHYSKDSVNGIYKIKRYDTKTGNIEILIEGTGGAIRPTPSPDGTKLAYIKRDDFQ--SSL 259

Query: 419 YSIDL 423
           Y +DL
Sbjct: 260 YLLDL 264



 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 12/141 (8%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  SPD S++ FE+   GK  L  +  +G   +      +     P WS  G  I FT +
Sbjct: 356 AQVSPDGSKVAFEA--LGKIWLKSL-PDGKMSRLTELGNDIGELYPQWSRDGKNIVFTTW 412

Query: 367 SGE-KFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK------- 417
           + + + A+ V+  K G  ++L  E      PT++P+G  +++ + + G+   +       
Sbjct: 413 NDQDQGAVQVISAKGGKAKQLTTEPGKYVEPTFAPNGELVVYRKTQGGNLTPRTWSQEPG 472

Query: 418 LYSIDLNGRNETLINTPAYAS 438
           +Y +DL  +  T I    Y +
Sbjct: 473 IYKVDLKTKQNTKITAEGYQA 493


>gi|307102700|gb|EFN50969.1| hypothetical protein CHLNCDRAFT_141607 [Chlorella variabilis]
          Length = 357

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 18/172 (10%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           N RI FV     +G    +L  M  DG+++R LTPS   +   P +SP+  +VAY+   D
Sbjct: 32  NGRIAFVR---ATGGRDPALWTMLPDGSDMRQLTPSSGDMEVHPSWSPSGDRVAYSGRHD 88

Query: 234 E--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQ 290
               I  V    T + R     G   + I+ P FS +G+  +    + D +  ++  D  
Sbjct: 89  GVWKIWEVQADGTGLRRLTD--GPPGAAIMVPAFSPDGRFIVFEGTEADGSTTVWRADAA 146

Query: 291 --SNATERLT----NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQS 333
              NAT RLT    +    ++ A  SPD   + F SDR    G+  +++M+ 
Sbjct: 147 DGGNAT-RLTPADQSPSITDMGAKPSPDGQLLAFASDRGNAPGQYDVWLMEG 197



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 7/138 (5%)

Query: 303 INISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           I++    +  + +I F     G++  L+ M  +GSD ++++         P WSP GD +
Sbjct: 22  IHVHPEATAKNGRIAFVRATGGRDPALWTMLPDGSDMRQLTPSSGDMEVHPSWSPSGDRV 81

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           A++      + I  ++ DG+  R L +    + +  P +SP GR ++F    + D  + +
Sbjct: 82  AYSGRHDGVWKIWEVQADGTGLRRLTDGPPGAAIMVPAFSPDGRFIVF-EGTEADGSTTV 140

Query: 419 YSID-LNGRNETLINTPA 435
           +  D  +G N T + TPA
Sbjct: 141 WRADAADGGNATRL-TPA 157


>gi|302823172|ref|XP_002993240.1| hypothetical protein SELMODRAFT_136782 [Selaginella moellendorffii]
 gi|300138910|gb|EFJ05661.1| hypothetical protein SELMODRAFT_136782 [Selaginella moellendorffii]
          Length = 717

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 9/113 (7%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLI 361
           N   S SPD   IVF S R G + LY+M +   ++  + +  E ++ D +  WS  G+ I
Sbjct: 525 NAFPSPSPDGKWIVFRSGRSGHKNLYIMDAIHGEEASLRRLTEGAWTDTMASWSHDGEWI 584

Query: 362 AFT----KFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFS 407
           AF+       G  F +  ++ DGSQ   ++  S    +  P +SP  RSL+F+
Sbjct: 585 AFSSDRHNPGGGSFQLYFVRPDGSQLHRVLNSSTGGRVNHPFFSPDSRSLVFT 637



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 8/110 (7%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDL---QSNATERLTNTLFINISASYSPDSSQIVFE 319
           P  S +GK  +    +    ++Y +D    +  +  RLT   + +  AS+S D   I F 
Sbjct: 528 PSPSPDGKWIVFRSGRSGHKNLYIMDAIHGEEASLRRLTEGAWTDTMASWSHDGEWIAFS 587

Query: 320 SDRE----GKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFT 364
           SDR     G  QLY ++ +GS   R+         + P +SP    + FT
Sbjct: 588 SDRHNPGGGSFQLYFVRPDGSQLHRVLNSSTGGRVNHPFFSPDSRSLVFT 637


>gi|293370700|ref|ZP_06617250.1| WD40-like protein [Bacteroides ovatus SD CMC 3f]
 gi|292634224|gb|EFF52763.1| WD40-like protein [Bacteroides ovatus SD CMC 3f]
          Length = 1096

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 18/141 (12%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
           A  SPD S+IVF      K  +Y + + G    +++   + SY  +PVWSP G  IAF  
Sbjct: 28  ARISPDGSEIVFCY----KGDIYKVPAQGGTAVQLTT--QTSYEANPVWSPDGKQIAFAS 81

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS-------- 416
                F + +M  DG   R L   S  + P+ ++P G+ + FS       GS        
Sbjct: 82  DRNGNFDLFIMPADGGAARRLTYHSASEIPSAFTPDGKYIFFSASIQDPVGSALFPTGAM 141

Query: 417 -KLYSIDL-NGRNETLINTPA 435
            +LY + +  GR E ++ TPA
Sbjct: 142 TELYKVPVAGGRTEQVLGTPA 162



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  Q     +LT       +  +SPD  QI F SDR G   L++M ++G   +R++
Sbjct: 44  DIYKVPAQGGTAVQLTTQTSYEANPVWSPDGKQIAFASDRNGNFDLFIMPADGGAARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++P G  I F+
Sbjct: 104 Y-HSASEIPSAFTPDGKYIFFS 124


>gi|302824273|ref|XP_002993781.1| hypothetical protein SELMODRAFT_187603 [Selaginella moellendorffii]
 gi|300138377|gb|EFJ05147.1| hypothetical protein SELMODRAFT_187603 [Selaginella moellendorffii]
          Length = 722

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 9/113 (7%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLI 361
           N   S SPD   IVF S R G + LY+M +   ++  + +  E ++ D +  WS  G+ I
Sbjct: 525 NAFPSPSPDGKWIVFRSGRSGHKNLYIMDAIHGEEASLRRLTEGAWTDTMASWSHDGEWI 584

Query: 362 AFT----KFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFS 407
           AF+       G  F +  ++ DGSQ   ++  S    +  P +SP  RSL+F+
Sbjct: 585 AFSSDRHNPGGGSFQLYFVRPDGSQLHRVLNSSTGGRVNHPFFSPDSRSLVFT 637



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 8/110 (7%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDL---QSNATERLTNTLFINISASYSPDSSQIVFE 319
           P  S +GK  +    +    ++Y +D    +  +  RLT   + +  AS+S D   I F 
Sbjct: 528 PSPSPDGKWIVFRSGRSGHKNLYIMDAIHGEEASLRRLTEGAWTDTMASWSHDGEWIAFS 587

Query: 320 SDRE----GKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFT 364
           SDR     G  QLY ++ +GS   R+         + P +SP    + FT
Sbjct: 588 SDRHNPGGGSFQLYFVRPDGSQLHRVLNSSTGGRVNHPFFSPDSRSLVFT 637


>gi|93005276|ref|YP_579713.1| WD-40-like beta propeller repeat-containing protein [Psychrobacter
           cryohalolentis K5]
 gi|92392954|gb|ABE74229.1| WD40-like beta Propeller [Psychrobacter cryohalolentis K5]
          Length = 340

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 109/245 (44%), Gaps = 18/245 (7%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI---LFEPRFSPNQQKVAY 228
           D    I +V E  V     ++L  +  DG+ ++ +    DQ+   ++ P +S + Q +AY
Sbjct: 62  DRQGYIAYVEEQGVGTAKISTLYRIRPDGSGLQLI----DQLNGYIYAPTWSADGQMLAY 117

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           +        ++Y+ D +   +   + N     L+P FS +GK+ L S       DIY + 
Sbjct: 118 SKQAARQHPKIYIYDVK-SSSHNLVVNVEGSNLSPSFSPDGKKLLYSSTVGGNADIYEMQ 176

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRISQDKE 346
           L   +T++LT      +  SY+ D    V+ SD  R G+  +Y       +   I+    
Sbjct: 177 LSDGSTKQLTTLPSTEVQPSYASDGQSFVYTSDKVRAGRPSIYRYSFATGNAALITTGGY 236

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLI 405
           A+   P  S     +A+   +G K A+ +M   G  + + + ++ L  P   SPSG+  +
Sbjct: 237 AA--SPQLSLDSQRLAY--LNGRKAAV-MMLTTG--QVINLAETGLDEPARLSPSGQYAL 289

Query: 406 FSRKK 410
           +  ++
Sbjct: 290 YPTRQ 294



 Score = 39.7 bits (91), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 1/97 (1%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSL 404
           E S   P +SP G  + ++   G    I  M+  DGS ++L    S    P+++  G+S 
Sbjct: 145 EGSNLSPSFSPDGKKLLYSSTVGGNADIYEMQLSDGSTKQLTTLPSTEVQPSYASDGQSF 204

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +++  K       +Y       N  LI T  YA+ PQ
Sbjct: 205 VYTSDKVRAGRPSIYRYSFATGNAALITTGGYAASPQ 241


>gi|158317342|ref|YP_001509850.1| serine/threonine protein kinase [Frankia sp. EAN1pec]
 gi|158112747|gb|ABW14944.1| serine/threonine protein kinase [Frankia sp. EAN1pec]
          Length = 721

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 14/153 (9%)

Query: 300 TLFINISASYSPDSSQIVFES--DREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           T+  +   S SPD   +V  S  D  G     LYV+  +GS   R+    +A+  DP WS
Sbjct: 525 TIADDARPSLSPDGKFLVVRSTTDESGFPNPGLYVVSLDGSGLFRLGAKPQAT--DPAWS 582

Query: 356 PQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVE-DSNLQA-PTWSPSGRSLIFSRKK 410
           P G+LIA+     E    F + +  +  SQ   +     N  A PT+SP G+ + FSR+ 
Sbjct: 583 PSGELIAYWSSETESDRGFIVTIPARPDSQPTPITNGQGNRDADPTFSPDGKRIAFSREV 642

Query: 411 DGDTGSKLYSIDLNGRN-ETLINTPAYASDPQW 442
           DGD   ++Y ++ +G   E +   P    DP +
Sbjct: 643 DGDL--EIYQMNTDGSAVERVTAEPGRDQDPAY 673



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 12/183 (6%)

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
           K F S PA+  K+  TI+DD   S++   G F   ++  S +  SG     L V+  DG+
Sbjct: 514 KLFTSGPAA--KL--TIADDARPSLS-PDGKF---LVVRSTTDESGFPNPGLYVVSLDGS 565

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMI 260
            +  L  ++ Q   +P +SP+ + +AY + + E D   +  +  R D  P  I N +   
Sbjct: 566 GLFRLG-AKPQAT-DPAWSPSGELIAYWSSETESDRGFIVTIPARPDSQPTPITNGQGNR 623

Query: 261 LA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            A P FS +GKR   S + D  ++IY ++   +A ER+T     +   +YSPD   + F 
Sbjct: 624 DADPTFSPDGKRIAFSREVDGDLEIYQMNTDGSAVERVTAEPGRDQDPAYSPDGKLLSFT 683

Query: 320 SDR 322
            +R
Sbjct: 684 GER 686



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 13/175 (7%)

Query: 263 PRFSSNGKRALISVQKDEA----MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           P  S +GK  ++    DE+      +Y V L  +   RL         A +SP    I +
Sbjct: 532 PSLSPDGKFLVVRSTTDESGFPNPGLYVVSLDGSGLFRLGAKPQATDPA-WSPSGELIAY 590

Query: 319 ESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            S     ++ +++       S    I+  +     DP +SP G  IAF++       I  
Sbjct: 591 WSSETESDRGFIVTIPARPDSQPTPITNGQGNRDADPTFSPDGKRIAFSREVDGDLEIYQ 650

Query: 376 MKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           M  DGS  ER+  E    Q P +SP G+ L F+    G+ G+ L  I L    +T
Sbjct: 651 MNTDGSAVERVTAEPGRDQDPAYSPDGKLLSFT----GERGTPLRRIYLTDPADT 701


>gi|297162553|gb|ADI12265.1| amidohydrolase [Streptomyces bingchenggensis BCW-1]
          Length = 1056

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 8/131 (6%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDP 352
           T ++T     N SA+ SPD   IV +        L+ + + G +  R++  DKEAS  +P
Sbjct: 47  TRQITVGQATNASAALSPDGRTIVMDL----LNLLWTLPAQGGEATRLTDIDKEAS--EP 100

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD 411
            +SP G  + +  ++   F + + + DGS+ R L E D + + P +SP G+ + ++ + D
Sbjct: 101 DFSPDGRRLVYQSYADGNFHLWLARADGSEARRLTEGDIDHREPRFSPDGKRIAYAAETD 160

Query: 412 GDTGSKLYSID 422
           G     +  +D
Sbjct: 161 GHYAIHVLDLD 171



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 75/181 (41%), Gaps = 8/181 (4%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA- 249
           N L  +   G     LT   D+   EP FSP+ +++ Y +Y D +    +L   R D + 
Sbjct: 75  NLLWTLPAQGGEATRLT-DIDKEASEPDFSPDGRRLVYQSYADGNF---HLWLARADGSE 130

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS- 308
            +R+         PRFS +GKR   + + D    I+ +DL S  ++R T+     +  + 
Sbjct: 131 ARRLTEGDIDHREPRFSPDGKRIAYAAETDGHYAIHVLDLDSGESKRWTSGTDATVQETQ 190

Query: 309 --YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             + PDS  IVF S +    Q  V          +    E     P  SP G  +A+   
Sbjct: 191 PFWRPDSKAIVFTSGKGDAPQSVVQVDADGKLTTLVTVTEGRVAGPSLSPDGTKLAYVHL 250

Query: 367 S 367
           +
Sbjct: 251 T 251



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 65/148 (43%), Gaps = 4/148 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS +G+R +     D    ++      +   RLT     +    +SPD  +I + ++ 
Sbjct: 100 PDFSPDGRRLVYQSYADGNFHLWLARADGSEARRLTEGDIDHREPRFSPDGKRIAYAAET 159

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKF-AIGVMKKD 379
           +G   ++V+  +  + KR +   +A+  +  P W P    I FT   G+   ++  +  D
Sbjct: 160 DGHYAIHVLDLDSGESKRWTSGTDATVQETQPFWRPDSKAIVFTSGKGDAPQSVVQVDAD 219

Query: 380 GSQERLL-VEDSNLQAPTWSPSGRSLIF 406
           G    L+ V +  +  P+ SP G  L +
Sbjct: 220 GKLTTLVTVTEGRVAGPSLSPDGTKLAY 247



 Score = 40.4 bits (93), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 9/119 (7%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           AP+++      I+ P  S +GK+   +   D    I+   + S     +++   IN   +
Sbjct: 329 APRKVKG----IVGPSLSPDGKQVAFAALGD----IWVGRIGSTPKAVVSDG-NINSDPA 379

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + PD S +V+ SDR G      +    S + R   + +   F PV++P G  +AF+ +S
Sbjct: 380 WHPDGSTLVYVSDRGGHAADLWLHDLESGENRRLTNLQGQLFGPVFAPDGKTVAFSFWS 438


>gi|91772443|ref|YP_565135.1| WD40-like beta propeller protein [Methanococcoides burtonii DSM
           6242]
 gi|91711458|gb|ABE51385.1| protein with TolB-like beta propeller domains [Methanococcoides
           burtonii DSM 6242]
          Length = 354

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 78/147 (53%), Gaps = 19/147 (12%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           ++ ++SPDS +IV+ S+    + ++ M S+G+++  I  D      +PV++  GD + F 
Sbjct: 47  VAPAWSPDSDRIVYSSE----QTIWTMNSDGTNKNEI-YDSIVWDGEPVFNTDGDRLYFA 101

Query: 365 K-----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                 +S +  +I V+  DG     + ++++++AP  SP G  L +  K  G+   +++
Sbjct: 102 SEHVNPYSAKFISIHVVDIDGLNRTQITKNADMRAPAVSPDGTQLAYLSKLSGNY--EIW 159

Query: 420 SIDLNGRNETLIN-------TPAYASD 439
            +D++G N+T I         PA++ D
Sbjct: 160 VMDIDGSNQTQITDSDIDEGVPAWSPD 186



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 57/269 (21%), Positives = 123/269 (45%), Gaps = 29/269 (10%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF--EPRFSPNQQKVAYATYD- 232
           RI++ SE         ++  M+ DG N   +    D I++  EP F+ +  ++ +A+   
Sbjct: 57  RIVYSSEQ--------TIWTMNSDGTNKNEI---YDSIVWDGEPVFNTDGDRLYFASEHV 105

Query: 233 ---DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                  + ++++D  ID   +      + + AP  S +G +     +     +I+ +D+
Sbjct: 106 NPYSAKFISIHVVD--IDGLNRTQITKNADMRAPAVSPDGTQLAYLSKLSGNYEIWVMDI 163

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEAS 348
             +   ++T++       ++SPD   I++    EG     + + N G     I ++   +
Sbjct: 164 DGSNQTQITDSDIDEGVPAWSPDGKHIIYS--LEGN----IWKVNIGPKVPSILKENYYT 217

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFS 407
            ++PV++P+G  +A+   +     I +M  DG   ++L   D +   P WSP G+S+ +S
Sbjct: 218 SYNPVFNPEGTKVAYVLETNGVKDIWIMNADGKGTKQLTFSDQDEIDPAWSPDGKSIAYS 277

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             K G+    ++ ++L+    T+ + P Y
Sbjct: 278 SNKAGEF--NIWKMELSMTEATIPHDPEY 304



 Score = 39.7 bits (91), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 76/169 (44%), Gaps = 15/169 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + VMD DG+N   +T S D     P +SP+ + + Y+   + +I +V +      + P  
Sbjct: 158 IWVMDIDGSNQTQITDS-DIDEGVPAWSPDGKHIIYSL--EGNIWKVNIGP----KVPSI 210

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +         P F+  G +    ++ +   DI+ ++     T++LT +    I  ++SPD
Sbjct: 211 LKENYYTSYNPVFNPEGTKVAYVLETNGVKDIWIMNADGKGTKQLTFSDQDEIDPAWSPD 270

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              I + S++ G+  ++ M+        +S  +     DP +  + DL+
Sbjct: 271 GKSIAYSSNKAGEFNIWKME--------LSMTEATIPHDPEYKDEDDLV 311


>gi|298242082|ref|ZP_06965889.1| peptidase S41 [Ktedonobacter racemifer DSM 44963]
 gi|297555136|gb|EFH89000.1| peptidase S41 [Ktedonobacter racemifer DSM 44963]
          Length = 1119

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 83/195 (42%), Gaps = 20/195 (10%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R+ +  K  ++ V +D   D++ V  +    ERLT          +SPD + + F    E
Sbjct: 28  RYPTIYKDYIVFVTED---DLWLVSSEGGRAERLTAGQGRMSHPHFSPDGNWLAFVGREE 84

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAI--GVMKK 378
           G  ++YVM + G   +R++ D         W+P G  I +   SG+   K+ +   +   
Sbjct: 85  GPGEVYVMPALGGPARRLTFDGGTCTVL-GWTPDGGAILYASSSGQFTAKYTVIYAISPA 143

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLYSIDLNGRNET 429
            G  ++L V  +N  A ++ P G  +I         + R + G  G        +G  + 
Sbjct: 144 GGPPQQLPVGMAN--AISYGPEGGVVIGRNIEEPAYWKRYRGGTVGHLWCDTTGSGTFQR 201

Query: 430 LINTPAYASDPQWVG 444
           L+N     +DP WVG
Sbjct: 202 LLNIHGNVADPCWVG 216


>gi|51892044|ref|YP_074735.1| acylaminoacyl-peptidase [Symbiobacterium thermophilum IAM 14863]
 gi|51855733|dbj|BAD39891.1| acylaminoacyl-peptidase [Symbiobacterium thermophilum IAM 14863]
          Length = 717

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 46/150 (30%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--- 365
           +SPD   +VF S+R G  QL+++   G + ++I++ K     +PVWSP G  IAFT    
Sbjct: 71  WSPDGRHLVFVSNRSGSNQLWLLSMEGGEARQITRIK-GGVQNPVWSPDGRTIAFTANLT 129

Query: 366 ---------------------------------------FSGEKFAIGVMKKDGSQERLL 386
                                                  ++ E+  I V+  DG + R L
Sbjct: 130 EAGIQPEGGDEDDQDLYRKYTKDVRVITRLHYKMDGVGFYTDERKHICVVDVDGGEPRQL 189

Query: 387 V-EDSNLQAPTWSPSGRSLIFS--RKKDGD 413
              D N    +W+P GR L+F+  R++D D
Sbjct: 190 TFGDFNHLDVSWTPDGRGLVFAANRREDRD 219



 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 58/269 (21%), Positives = 101/269 (37%), Gaps = 55/269 (20%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT----- 230
            ++FVS    S    N L ++  +G   R +T  +  +   P +SP+ + +A+       
Sbjct: 77  HLVFVSNRSGS----NQLWLLSMEGGEARQITRIKGGVQ-NPVWSPDGRTIAFTANLTEA 131

Query: 231 --------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                    DD+D+ R Y  D R+             I    +  +G    +    DE  
Sbjct: 132 GIQPEGGDEDDQDLYRKYTKDVRV-------------ITRLHYKMDG----VGFYTDERK 174

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-----GSD 337
            I  VD+      +LT   F ++  S++PD   +VF ++R      Y    +      SD
Sbjct: 175 HICVVDVDGGEPRQLTFGDFNHLDVSWTPDGRGLVFAANRREDRDWYPGHVDLWYLSLSD 234

Query: 338 QKRISQDKEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                Q + +S + P   P  D   A  +  G    + +   DG+            +P+
Sbjct: 235 D---GQGQRSSAYTPPEGPGPDRCEAAEETQGNCMPVRLTPGDGTLA--------CSSPS 283

Query: 397 WSPSGRSLIFSRKKDGDTG---SKLYSID 422
            SP GR + F      ++G   + LY +D
Sbjct: 284 ASPDGRMIAFLASDPAESGYGLTGLYVLD 312


>gi|242037461|ref|XP_002466125.1| hypothetical protein SORBIDRAFT_01g001880 [Sorghum bicolor]
 gi|241919979|gb|EER93123.1| hypothetical protein SORBIDRAFT_01g001880 [Sorghum bicolor]
          Length = 690

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 9/113 (7%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLI 361
           N   S SPD   +VF S R G + LY+M +   +   I +  E  + D +  WSP G+ I
Sbjct: 487 NAFPSPSPDGKWVVFRSGRSGHKNLYIMDAEDGEASGIRRLTEGPWSDTMCNWSPDGEWI 546

Query: 362 AFT----KFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFS 407
           AF        G  F I ++  +G+  R +V  ++      P +SP  ++L+F+
Sbjct: 547 AFASDRHNPGGGSFGIYMVHPNGTGLRRVVHSTDGGRTNHPWFSPDSKTLVFT 599



 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 29/163 (17%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTNTLFINISASYSPDSSQIVFE 319
           P  S +GK  +    +    ++Y +D +   ++   RLT   + +   ++SPD   I F 
Sbjct: 490 PSPSPDGKWVVFRSGRSGHKNLYIMDAEDGEASGIRRLTEGPWSDTMCNWSPDGEWIAFA 549

Query: 320 SDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAFT---------- 364
           SDR     G   +Y++  NG+  +R+    +    +  W SP    + FT          
Sbjct: 550 SDRHNPGGGSFGIYMVHPNGTGLRRVVHSTDGGRTNHPWFSPDSKTLVFTSDYAAVSAEP 609

Query: 365 -------KFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSP 399
                  +  GE F + +   DGS  R L  +S     P+W+P
Sbjct: 610 ISNPHHYQPYGEIFTVNI---DGSGIRRLTHNSFEDGTPSWTP 649


>gi|84497170|ref|ZP_00995992.1| WD40-like Beta Propeller protein [Janibacter sp. HTCC2649]
 gi|84382058|gb|EAP97940.1| WD40-like Beta Propeller protein [Janibacter sp. HTCC2649]
          Length = 352

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 30/195 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE- 326
           NG+ + + +        ++ +    A  ++T+  F N  A++SPD +++ F+S R   E 
Sbjct: 40  NGRISFMRMDDTGHWQTWTANPDLTAQHKITDGDFDNSWAAWSPDGTRLAFDSSRLAPEA 99

Query: 327 -----QLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGE---KFAIGVM 376
                +++ M  +G+D   + Q     +F   P WSP G  IAFT   G+      I  +
Sbjct: 100 NGDLKEIFTMAPDGTD---VHQVTNLGFFAGQPTWSPDGRWIAFTTDGGDYPTSQGIYAI 156

Query: 377 KKDGSQ-ERLLVEDSN-----LQAPTWSPSGRSLIFSRKKDG----------DTGSKLYS 420
             DG+   R++   +      L AP +SP G  L ++  + G             S L++
Sbjct: 157 HPDGTGLHRIVALPAGPRSVWLDAPRFSPDGSRLAYTFFQGGKPTRSPWSWKGETSALWT 216

Query: 421 IDLNGRNETLINTPA 435
           + ++G N   +  P 
Sbjct: 217 VGVDGANARQVVAPG 231



 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 33/181 (18%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F S  LAP   +NG    I     +  D++ V          TN  F     ++SPD   
Sbjct: 90  FDSSRLAPE--ANGDLKEIFTMAPDGTDVHQV----------TNLGFFAGQPTWSPDGRW 137

Query: 316 IVFESDR---EGKEQLYVMQSNGSDQKRI---SQDKEASYFD-PVWSPQGDLIAFTKFSG 368
           I F +D       + +Y +  +G+   RI        + + D P +SP G  +A+T F G
Sbjct: 138 IAFTTDGGDYPTSQGIYAIHPDGTGLHRIVALPAGPRSVWLDAPRFSPDGSRLAYTFFQG 197

Query: 369 ------------EKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTG 415
                       E  A+  +  DG+  R +V     +    WSP GR L+F +  + D G
Sbjct: 198 GKPTRSPWSWKGETSALWTVGVDGANARQVVAPGQKVGDADWSPDGRHLVFEQMGN-DPG 256

Query: 416 S 416
           S
Sbjct: 257 S 257



 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 102/245 (41%), Gaps = 41/245 (16%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           H I+D  + +         +R+ F S  +    +G +K  +  M  DG ++  +T +   
Sbjct: 67  HKITDGDFDNSWAAWSPDGTRLAFDSSRLAPEANGDLKE-IFTMAPDGTDVHQVT-NLGF 124

Query: 213 ILFEPRFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFS 266
              +P +SP+ + +A+ T        + I  ++   T + R        RS+ L APRFS
Sbjct: 125 FAGQPTWSPDGRWIAFTTDGGDYPTSQGIYAIHPDGTGLHRIVALPAGPRSVWLDAPRFS 184

Query: 267 SNGKRALISV------------QKDEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDS 313
            +G R   +              K E   +++V +  +NA + +     +   A +SPD 
Sbjct: 185 PDGSRLAYTFFQGGKPTRSPWSWKGETSALWTVGVDGANARQVVAPGQKVG-DADWSPDG 243

Query: 314 SQIVFE---SDREGKEQLYVMQSNGSDQKRISQDK------------EASYFDPVWSPQG 358
             +VFE   +D     ++  + + G     +SQD             +AS FDPV+SP G
Sbjct: 244 RHLVFEQMGNDPGSLSRVLRVPATGGGITALSQDTGLRGGRSDNWSFQAS-FDPVYSPDG 302

Query: 359 DLIAF 363
             I F
Sbjct: 303 TTILF 307


>gi|167765001|ref|ZP_02437122.1| hypothetical protein BACSTE_03395 [Bacteroides stercoris ATCC
           43183]
 gi|167697670|gb|EDS14249.1| hypothetical protein BACSTE_03395 [Bacteroides stercoris ATCC
           43183]
          Length = 1088

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 16/139 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD ++IVF      K  +Y + + G    +++  +E+    PVWSP G  IAF      
Sbjct: 31  SPDGTEIVFCY----KGDIYKVSAKGGTATQLTT-QESYESSPVWSPDGKQIAFASDRQG 85

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS---------KLY 419
            F + VM  DG   + L  +S  + P+ ++P G+ ++FS       GS         +LY
Sbjct: 86  NFDVFVMPSDGGAAQRLTTNSAGEIPSAFTPDGKYILFSAAIQDPAGSALFPSPAMTELY 145

Query: 420 SID-LNGRNETLINTPAYA 437
            +    GR E ++ TPA A
Sbjct: 146 KVPATGGRTEQVLGTPAEA 164



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  +     +LT       S  +SPD  QI F SDR+G   ++VM S+G   +R++
Sbjct: 44  DIYKVSAKGGTATQLTTQESYESSPVWSPDGKQIAFASDRQGNFDVFVMPSDGGAAQRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
            +  A      ++P G  I F+
Sbjct: 104 TNS-AGEIPSAFTPDGKYILFS 124


>gi|224438537|ref|ZP_03659457.1| translocation protein TolB [Helicobacter cinaedi CCUG 18818]
 gi|313144963|ref|ZP_07807156.1| protein tolB [Helicobacter cinaedi CCUG 18818]
 gi|313129994|gb|EFR47611.1| protein tolB [Helicobacter cinaedi CCUG 18818]
          Length = 417

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 67/321 (20%), Positives = 132/321 (41%), Gaps = 38/321 (11%)

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           L     L+D+   K I  K +  +    +  +AH ++ DI   I      +  R++ +S 
Sbjct: 100 LTATLSLYDINTSKHIFTKTYTENDIKRFPFLAHNMTIDINSYIKAPSIQWMQRLVVLSR 159

Query: 183 SVVSGIIKNSLC--------VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            V SG  +  +C        V+ + G NI             P+++ ++Q+  Y T   E
Sbjct: 160 YVGSGSSEILICDYTLTYQKVVVKGGLNIF------------PKWADSKQESIYYTKYLE 207

Query: 235 --DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
              I++  L   +I++     G    + +    S NG+  ++S+      D+Y  + +S 
Sbjct: 208 VPTIVKHNLATGQIEQLVGSEG----VAIVSDVSKNGENLILSLSPTALSDLYIFNTKSK 263

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RLTN   I++   +  D  +I+F SDR G   +++M+ +G   +++         + 
Sbjct: 264 NLRRLTNYSGIDVDGKFVNDEKEIIFVSDRLGYPNIFMMRLDGGGTEQVVLHGRN---NS 320

Query: 353 VWSPQGDLIAFT------KFSGEKFAIGVMK-KDGSQE-RLLVEDSNLQAPTWSPSGRSL 404
             +  G    +T      +F G  F + ++    GS   R L  +   Q P +S  G S+
Sbjct: 321 AITSNGKYAVYTSRETNNEFGGNTFNLYLISLAPGSNYIRRLTANGKNQMPKYSSDGGSI 380

Query: 405 IFSRKKDGDTGSKLYSIDLNG 425
           ++ +     +   +  +D N 
Sbjct: 381 MYLKHYKNQSALGIIRVDYNA 401


>gi|282861616|ref|ZP_06270680.1| WD40 domain protein beta Propeller protein [Streptomyces sp. ACTE]
 gi|282563432|gb|EFB68970.1| WD40 domain protein beta Propeller protein [Streptomyces sp. ACTE]
          Length = 1069

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 21/182 (11%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRI 341
           +++V    +  +RLT++    +S ++SPD + I + SD +     Q+Y    +G  ++RI
Sbjct: 160 LWTVRTDGSGLQRLTDSAADEVSPTFSPDGTLIAYSSDSDPARGRQIYERALSGGPERRI 219

Query: 342 SQDKEASYFDPVWSP-----QGDLIAFT----KFSGEKFAIGVMKKDG-SQERLLVEDS- 390
           S     +  +P W+P       DL+AFT       GE+    +   DG   +R ++    
Sbjct: 220 SDAPAGNATEPSWNPVDDDAHRDLVAFTLQTGGGPGEELEPRLWVTDGKGGDRAVLTGGP 279

Query: 391 ---NLQAPTWSPSGRSLIF---SRKKDGDTGSKLYSIDLN--GRNETLINTPAYASDPQW 442
              + ++P W P G  L+F    +    D    +Y +     G  E L+N       P W
Sbjct: 280 AEWSTKSPAWLPDGGGLLFLSPDQTCSCDPFDNVYRVGTETYGAPELLLNENRAVDSPTW 339

Query: 443 VG 444
           +G
Sbjct: 340 LG 341



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 61/255 (23%), Positives = 105/255 (41%), Gaps = 54/255 (21%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR- 257
           DG  + +L+P  DQ      F  N  +V   TY   ++L   L + R   +P  +G    
Sbjct: 292 DGGGLLFLSP--DQTCSCDPFD-NVYRVGTETYGAPELL---LNENRAVDSPTWLGPAAT 345

Query: 258 -SMILAPRFSSNGKRALI-------SVQKDEAMDIYSVDLQSNA-TERLTNTLFINISA- 307
            S+++A    ++  +AL+       S  ++  M +   D  S   T+   + LF      
Sbjct: 346 GSVVVARTSGASPHKALLLDMRQDGSDPRNLGMTLLQEDPASETNTDPALDPLFDPAEGF 405

Query: 308 -------SYSPDSSQIV---FESDREGK-EQLYVMQSNGSDQKRISQDKEASY---FDPV 353
                  SY+PD  +IV   FE    G+ ++++++ ++G+  + +            DP 
Sbjct: 406 DPWTERQSYTPDGRRIVVTRFEDTEAGRIQRIWLVDADGAKPEAMPLAGRGPLDRDTDPA 465

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------------------P 395
           +SP G  IAFT+ +      G      +  R+LV D+   A                  P
Sbjct: 466 FSPDGTRIAFTRVT-----PGTDGDAPATARVLVADAVTGAITDEVVPPAGQSRGGDAQP 520

Query: 396 TWSPSGRSLIFSRKK 410
           TWSP G +L F+R +
Sbjct: 521 TWSPDGGTLAFTRDQ 535


>gi|119964335|ref|YP_947935.1| acylaminoacyl-peptidase [Arthrobacter aurescens TC1]
 gi|119951194|gb|ABM10105.1| putative acylaminoacyl-peptidase [Arthrobacter aurescens TC1]
          Length = 660

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 12/140 (8%)

Query: 262 APRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           AP    +G +A++SV + +         +++V L +    R     F + S ++SPD   
Sbjct: 3   APAIHPDGTKAVVSVTRPDFDADSYVGQLWNVPLDTTKFPRRITRGFRDSSPAFSPDGLV 62

Query: 316 IVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           + F  SD  GK QLYV+++ G + +RI+ D+ A     VW+P    IAF     E+   G
Sbjct: 63  LAFLRSDPNGKPQLYVVEAAGGEPQRIT-DQHAGVGGFVWAPDSHRIAFEARVPEQGRYG 121

Query: 375 VMKKDGSQERLLVEDSNLQA 394
            +   GS      ED+ L A
Sbjct: 122 TVDGVGSG----AEDARLIA 137


>gi|116620509|ref|YP_822665.1| peptidase S41 [Candidatus Solibacter usitatus Ellin6076]
 gi|116223671|gb|ABJ82380.1| peptidase S41 [Candidatus Solibacter usitatus Ellin6076]
          Length = 1121

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 76/175 (43%), Gaps = 19/175 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D++  +   +  +RLT+    ++   +SPD + I F S+REG   +YV+ + G   ++++
Sbjct: 42  DLWIANENGSGAQRLTDNQARDVYPRFSPDGNWIAFSSNREGNYDVYVVAATGGKPRQLT 101

Query: 343 QDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMK-----KDGSQERLLVEDSNLQAP 395
                S  D V  WSP G  I FT   G      VM       +G  ER +  D    A 
Sbjct: 102 FH---SADDNVVNWSPDGKKILFTSARGNGVFPSVMTLWEIPAEGGIERPVPTDWGAWA- 157

Query: 396 TWSPSGRSLIFSRKKD--------GDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           ++SP G  L F+R           G   + L+ ++L  +  T +    Y  +  W
Sbjct: 158 SYSPDGSKLAFTRHPATWSRKHYRGSYAADLWVMELASKKFTRLGNEDYKGNRLW 212



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 54/248 (21%), Positives = 103/248 (41%), Gaps = 30/248 (12%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I F   +V+  +  N++  +   G     +T   D  LF P  S + + + Y     ED 
Sbjct: 234 IQFGGPAVMKSV--NNIWKISEKGGKETQVTHHADGNLFFPSISADGKTIVY-----EDN 286

Query: 237 LRVYLMDTR--------IDRAPKRIGNFRSMIL-----APRFSSNGKRALISVQKDEAMD 283
             ++ +DT         ID       N R ++      A   S + KRA I    +    
Sbjct: 287 FGIWKLDTASGKSSEIVIDIKADSKENDRELVTLTDAQAFSLSPSNKRAAIVAHGE---- 342

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           I+++       +R++ + +      +SP+   I F SDR G+E++Y+    G + K++S 
Sbjct: 343 IFTIATDRGEPQRVSESAWKEQEPRWSPNGKWIAFVSDRTGREEIYLSDELGKNAKKLS- 401

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSG 401
           D +      VW      +    +SG    + ++  +  +  +L   E  N+    +SP G
Sbjct: 402 DVDCDKNSLVWGADSKALL---WSGSDHKLRLVDVESGKTDILAQGEAGNITGAQFSPDG 458

Query: 402 RSLIFSRK 409
           + L ++R+
Sbjct: 459 KYLSYARQ 466


>gi|283955278|ref|ZP_06372778.1| putative tolB protein [Campylobacter jejuni subsp. jejuni 414]
 gi|283793192|gb|EFC31961.1| putative tolB protein [Campylobacter jejuni subsp. jejuni 414]
          Length = 402

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 92/196 (46%), Gaps = 12/196 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P++   +Q + Y T  D D   +Y  D   ++A K + +   M++A   S++G + L+++
Sbjct: 178 PKWGNKEQTLFYYTAYDYDKPTLYRYDLNTNKASKVLSS-GGMVVASDVSADGSKLLVTM 236

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYV--MQS 333
              +  D+Y  DL +    +LTN   I+++ ++   D S++VF SDR G   +++  + S
Sbjct: 237 APKDQPDVYLYDLNTKNLRQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNS 296

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDS 390
           N ++Q        ++      S   D + ++     +   F I +M  +    R L  + 
Sbjct: 297 NSAEQVVFHGRNNSAV-----STYKDFLVYSSREPNQVGVFNIYLMSINSDYIRQLTANG 351

Query: 391 NLQAPTWSPSGRSLIF 406
               P +S  G S++F
Sbjct: 352 KNLFPRFSSDGGSIVF 367


>gi|311745254|ref|ZP_07719039.1| amidohydrolase family protein [Algoriphagus sp. PR1]
 gi|126577782|gb|EAZ82002.1| amidohydrolase family protein [Algoriphagus sp. PR1]
          Length = 1209

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 6/131 (4%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ ++      +T  +       YSPD ++I+F SDR G + L+ +  +  D  +I+
Sbjct: 93  DIYTIPIEGGKASPITTGMAYETHPRYSPDGTKILFTSDRAGSDNLWYIDMDKKDTVQIT 152

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVEDSN---LQAPTWS 398
           +DK        W+P  + I   K  G +   + +  KDG     L E+        P  S
Sbjct: 153 KDKNGDVPGADWTPDSEYIVVAK--GRRITKLWMYHKDGGGGIQLNENPGSIKTIDPFVS 210

Query: 399 PSGRSLIFSRK 409
           P G+ + FS++
Sbjct: 211 PDGKKVYFSQR 221



 Score = 39.7 bits (91), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 79/171 (46%), Gaps = 12/171 (7%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESD 321
           PR+S +G + L +  +  + +++ +D+    T ++T     ++  A ++PDS  IV    
Sbjct: 117 PRYSPDGTKILFTSDRAGSDNLWYIDMDKKDTVQITKDKNGDVPGADWTPDSEYIVVAKG 176

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGE--------KFA 372
           R    +L++   +G    +++++  +    DP  SP G  + F++ SG         ++ 
Sbjct: 177 RR-ITKLWMYHKDGGGGIQLNENPGSIKTIDPFVSPDGKKVYFSQRSGSWNYNALLPQYQ 235

Query: 373 IGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           IG    D G    +     +   PT S  G+ +++  + +  TG  L +I+
Sbjct: 236 IGTYDFDKGELNTITSRYGSAFTPTLSDDGKWMVYGSRWEEKTGLVLRNIE 286



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRI 341
           +Y +D       R+T+  F     ++SPD SQ+ F    + EG +       N +   ++
Sbjct: 395 LYVMDYPEGEPRRVTDNDFTEAMPTWSPDGSQLAFVGWDESEGGQLFKASLGNTNTVTKL 454

Query: 342 SQDKEASYFDPVWSPQGDLIAF 363
           S +K A Y  P W P   +  F
Sbjct: 455 SSEK-ALYMQPAWGPNNRIAVF 475


>gi|311069718|ref|YP_003974641.1| putative acylaminoacyl-peptidase [Bacillus atrophaeus 1942]
 gi|310870235|gb|ADP33710.1| putative acylaminoacyl-peptidase [Bacillus atrophaeus 1942]
          Length = 658

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 46/204 (22%)

Query: 263 PRFSSNGKRA-LISVQKDEAMDIYS-----VDLQSNATERLTNTLFINISASYSPDSSQI 316
           P +S +GKRA  +  Q ++  D Y+      D +S  +   T     N    +SPD  Q+
Sbjct: 19  PHYSPDGKRAAFVQTQVNKEKDSYTSHIMVYDTESGHSVPWTYGEKKNSEPRWSPDGRQL 78

Query: 317 VFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG----------------- 358
            F SDREG   QLY++ ++G + ++++ D       PVWSP G                 
Sbjct: 79  AFISDREGDAPQLYILSTDGGEARKLT-DIPYGVSQPVWSPDGCSLLLSVNLAASEHVND 137

Query: 359 ---------DLIAFTKFSGEKFAIGVMKKDGSQ-----------ERLLVEDSNLQAPTWS 398
                    + +     + +K   G++K   +Q           ++L    ++   P +S
Sbjct: 138 KEKAEHDNNEPVEIHSLTYKKDGKGLIKGTYAQIILVSAVTGEIKQLTAHKADHLDPVFS 197

Query: 399 PSGRSLIFSRK-KDGDTGSKLYSI 421
           P G+S++F+    D D  SK Y +
Sbjct: 198 PDGKSIVFTANLTDQDDASKPYDV 221



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 74/149 (49%), Gaps = 10/149 (6%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           EPR+SP+ +++A+ +  + D  ++Y++ T    A +++ +    +  P +S +G   L+S
Sbjct: 68  EPRWSPDGRQLAFISDREGDAPQLYILSTDGGEA-RKLTDIPYGVSQPVWSPDGCSLLLS 126

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           V    +     V+ +  A       + I+ S +Y  D   ++    +    Q+ ++ +  
Sbjct: 127 VNLAASE---HVNDKEKAEHDNNEPVEIH-SLTYKKDGKGLI----KGTYAQIILVSAVT 178

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + K+++  K A + DPV+SP G  I FT
Sbjct: 179 GEIKQLTAHK-ADHLDPVFSPDGKSIVFT 206



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 42/106 (39%), Gaps = 21/106 (19%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-------------QAPTW 397
           DP +SP G   AF +    K      +KD     ++V D+                 P W
Sbjct: 18  DPHYSPDGKRAAFVQTQVNK------EKDSYTSHIMVYDTESGHSVPWTYGEKKNSEPRW 71

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQW 442
           SP GR L F   ++GD   +LY +  + G    L + P   S P W
Sbjct: 72  SPDGRQLAFISDREGDA-PQLYILSTDGGEARKLTDIPYGVSQPVW 116


>gi|237722924|ref|ZP_04553405.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229447446|gb|EEO53237.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 1119

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 18/141 (12%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
           A  SPD S+IVF      K  +Y + + G    +++   + SY  +PVWSP G  IAF  
Sbjct: 28  ARISPDGSEIVFCY----KGDIYKVPAQGGTAVQLTT--QTSYEANPVWSPDGKQIAFAS 81

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS-------- 416
                F + +M  DG   R L   S  + P+ ++P G+ + FS       GS        
Sbjct: 82  DRNGNFDLFIMPADGGAARRLTYHSASEIPSAFTPDGKYIFFSASIQDPVGSALFPTGAM 141

Query: 417 -KLYSIDL-NGRNETLINTPA 435
            +LY + +  GR E ++ TPA
Sbjct: 142 TELYKVPVAGGRTEQVLGTPA 162



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  Q     +LT       +  +SPD  QI F SDR G   L++M ++G   +R++
Sbjct: 44  DIYKVPAQGGTAVQLTTQTSYEANPVWSPDGKQIAFASDRNGNFDLFIMPADGGAARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++P G  I F+
Sbjct: 104 Y-HSASEIPSAFTPDGKYIFFS 124


>gi|152993347|ref|YP_001359068.1| translocation protein TolB [Sulfurovum sp. NBC37-1]
 gi|151425208|dbj|BAF72711.1| Tol biopolymer transport system component TolB [Sulfurovum sp.
           NBC37-1]
          Length = 412

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 35/254 (13%)

Query: 204 RYLTPSRDQILFE------------------PRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           RY  P R +IL                    P+++ + QK  Y  Y     L   L    
Sbjct: 155 RYTAPKRSEILLADYTFTYQKVIIRGGLNLFPKWADSAQKSFY--YTSYAGLIPTLNKIN 212

Query: 246 IDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           I    K ++ +   MI+    S +G + L+++  +   DIY + L + +  R+T    I+
Sbjct: 213 IYTGSKSKVASSEGMIVCSDVSPDGSKMLLTMSPEGQPDIYEMSLFTGSKTRVTKFNGID 272

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAF 363
           ++  Y  + SQIVF S+R G   ++    N +  Q+ +   +  +  D      G+ I +
Sbjct: 273 VNGKYLGNGSQIVFVSNRLGYANIFKKSINSAAVQQVVFHGRNNNAVD----AHGNKIIY 328

Query: 364 TK------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                   F G +F + +   +G   R L    + Q P +S  G S+I   K++G++ S 
Sbjct: 329 CSREGNNAFGGNRFNLYLTSANGGSSRPLTTTGSNQFPRFSTDG-SVILYIKQNGNSSSI 387

Query: 418 LYSIDLNGRNETLI 431
            Y I+L G +++L+
Sbjct: 388 GY-INL-GSSQSLL 399


>gi|320107875|ref|YP_004183465.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319926396|gb|ADV83471.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
          Length = 729

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 4/141 (2%)

Query: 276 VQKDEAMDIYSVDLQSN---ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           V+ DE  +I+ V +Q+    + +R   +   N S S+SPD   I F SDR G  +++   
Sbjct: 439 VESDENWNIWRVPIQNGHIGSPKRFLASQGHNHSPSFSPDGRTIAFVSDRSGTPEIWFAN 498

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-N 391
            +GS  ++++           WSP    + F         I  M   G +  L   +   
Sbjct: 499 EDGSSLRQMTHFGGPWLGTIRWSPDNKAVVFDARPNGNSEIFTMSASGGKPTLFEHEQFE 558

Query: 392 LQAPTWSPSGRSLIFSRKKDG 412
           ++ P WS  GRS+ F   + G
Sbjct: 559 VRRPGWSRDGRSVYFDTTRAG 579



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 7/155 (4%)

Query: 263 PRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           PRFS +GKR A +      A +I+++       ++LT          ++ D   ++F S+
Sbjct: 338 PRFSQDGKRIAFVRYISHGAGEIFTMAADGTDLKQLTTDHRNVRGVDWASDGWHLIFASN 397

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK---- 377
           R G  +L  +  NG + + +  D  AS  +P  S  G+ +AF + S E + I  +     
Sbjct: 398 RRGSYELREIDRNGGESQPLPSDT-ASASEPAISRIGNWMAFVE-SDENWNIWRVPIQNG 455

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             GS +R L    +  +P++SP GR++ F   + G
Sbjct: 456 HIGSPKRFLASQGHNHSPSFSPDGRTIAFVSDRSG 490



 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 15/152 (9%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            +N +    S S +PD +++ +  D       +Y+     S   R++ DK+     P WS
Sbjct: 179 FSNEIGQQFSPSIAPDGTRVAYVWDGNADNYDIYIKDLKTSGVVRLTDDKQPD-IHPAWS 237

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VED-----------SNLQAPTWSPSGR 402
           P G  +AF + S     + V    G  E  +  + D           S  Q+PTW+P GR
Sbjct: 238 PDGREVAFLRRSPSGTEVFVKSAGGGAEHPVGAIRDTSGLWASENPFSGCQSPTWTPDGR 297

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            L+ +     D G+ L  + ++   E  + +P
Sbjct: 298 QLLLTDGLGKDYGAGLVLLSVDSGTEKPLTSP 329



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 39/263 (14%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           F P  +P+  +VAY    + D   +Y+ D +      R+ + +   + P +S +G+    
Sbjct: 187 FSPSIAPDGTRVAYVWDGNADNYDIYIKDLKTSGV-VRLTDDKQPDIHPAWSPDGREVAF 245

Query: 275 SVQKDEAMDIYSVDLQSNATE-----RLTNTLFIN-------ISASYSPDSSQIVFESDR 322
             +     +++       A       R T+ L+ +        S +++PD  Q++  +D 
Sbjct: 246 LRRSPSGTEVFVKSAGGGAEHPVGAIRDTSGLWASENPFSGCQSPTWTPDGRQLLL-TDG 304

Query: 323 EGKE---QLYVMQSNGSDQKRISQDK---EASYFDPVWSPQGDLIAFTKF----SGEKFA 372
            GK+    L ++  +   +K ++  +   E  Y  P +S  G  IAF ++    +GE F 
Sbjct: 305 LGKDYGAGLVLLSVDSGTEKPLTSPRPQDEDCY--PRFSQDGKRIAFVRYISHGAGEIF- 361

Query: 373 IGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETL 430
              M  DG+  + L  D  N++   W+  G  LIF+  + G    +L  ID N G ++ L
Sbjct: 362 --TMAADGTDLKQLTTDHRNVRGVDWASDGWHLIFASNRRGSY--ELREIDRNGGESQPL 417

Query: 431 INTPAYASDP------QWVGFMD 447
            +  A AS+P       W+ F++
Sbjct: 418 PSDTASASEPAISRIGNWMAFVE 440


>gi|219847845|ref|YP_002462278.1| WD40 domain-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219542104|gb|ACL23842.1| WD40 domain protein beta Propeller [Chloroflexus aggregans DSM
           9485]
          Length = 618

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 21/134 (15%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS------------- 306
           +  P +S +G+        +   +IY  D++        +TL+  +              
Sbjct: 466 VETPTWSPDGRSLFWVTNCEGNFEIYRADVRY----YYIDTLYAGVELVNLLNLTNNAAN 521

Query: 307 ---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              A  SPD  QI F SDR+G  ++YVM S+GS+ +R++ +  A+   P WSP G  +AF
Sbjct: 522 DRFARVSPDGKQIAFASDRDGNWEIYVMNSDGSNVRRLTNNP-ATDDAPTWSPDGRQLAF 580

Query: 364 TKFSGEKFAIGVMK 377
                  F I ++ 
Sbjct: 581 ASDRDGDFEIYILN 594



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 69/180 (38%), Gaps = 63/180 (35%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSN----GSDQKRISQDKEASYFDPVWSPQG-DL 360
           +A  SPD + +VF S+R G  QLY+ + N    G  Q+  S D   +   P WSP G  L
Sbjct: 419 NAMVSPDGNLMVFVSERTGAPQLYLRRLNIPLRGFAQQITSYDPACNVETPTWSPDGRSL 478

Query: 361 IAFTKFSG-----------------------------------EKFA------------- 372
              T   G                                   ++FA             
Sbjct: 479 FWVTNCEGNFEIYRADVRYYYIDTLYAGVELVNLLNLTNNAANDRFARVSPDGKQIAFAS 538

Query: 373 -------IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  I VM  DGS  R L  + +   APTWSP GR L F+  +DGD   ++Y +++N
Sbjct: 539 DRDGNWEIYVMNSDGSNVRRLTNNPATDDAPTWSPDGRQLAFASDRDGDF--EIYILNVN 596



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R S +GK+   +  +D   +IY ++   +   RLTN    + + ++SPD  Q+ F SDR+
Sbjct: 526 RVSPDGKQIAFASDRDGNWEIYVMNSDGSNVRRLTNNPATDDAPTWSPDGRQLAFASDRD 585

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           G  ++Y++  N            A    P+W+
Sbjct: 586 GDFEIYILNVNDGTVTTQVTQNTAQDRWPLWA 617


>gi|154290642|ref|XP_001545913.1| hypothetical protein BC1G_15641 [Botryotinia fuckeliana B05.10]
 gi|150847472|gb|EDN22665.1| hypothetical protein BC1G_15641 [Botryotinia fuckeliana B05.10]
          Length = 674

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/214 (25%), Positives = 84/214 (39%), Gaps = 45/214 (21%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRID 247
           +L + + DG+N R L  +     +   FSP+ + V + T  +     DI RV +  T ++
Sbjct: 74  TLYIANADGSNERELLGNSSSYDYHGNFSPDGKYVIFTTERNGDGQSDIYRVKVDGTGLE 133

Query: 248 RAPKRIGNFRSMILAPRFSSNG-------KRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                     S++  P F   G         A +S Q +   +I+  DL +     LTNT
Sbjct: 134 ----------SLVETPSFEDAGVLSPDGTTLAYVSTQGNFTANIWVKDLTTGVAFNLTNT 183

Query: 301 LFI---------NISASYSPDSSQIVFESDRE----------GKEQ-----LYVMQSNGS 336
                       +   S+SPD   I F SDR           G E      +Y ++ NGS
Sbjct: 184 PTTAGDNALPDGHFRPSFSPDGEWIAFSSDRNTAWTGHSNGTGWEHTQELSVYKIRPNGS 243

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           D  ++      S   P WSP G  I F + + E 
Sbjct: 244 DFSQVVTKAGYSLGSPKWSPDGSRIIFYEMTREN 277



 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 3/65 (4%)

Query: 375 VMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLI 431
           +   DGS ER L+ +S+       +SP G+ +IF+ +++GD  S +Y + ++G   E+L+
Sbjct: 77  IANADGSNERELLGNSSSYDYHGNFSPDGKYVIFTTERNGDGQSDIYRVKVDGTGLESLV 136

Query: 432 NTPAY 436
            TP++
Sbjct: 137 ETPSF 141


>gi|319650056|ref|ZP_08004205.1| YuxL protein [Bacillus sp. 2_A_57_CT2]
 gi|317398237|gb|EFV78926.1| YuxL protein [Bacillus sp. 2_A_57_CT2]
          Length = 661

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 89/231 (38%), Gaps = 52/231 (22%)

Query: 263 PRFSSNGKR-ALISVQKDEAMDIYSVDL------QSNATERLTNTLFINISASYSPDSSQ 315
           P+ S NG   A +  +  +  + YS ++      + N   + T     N S  +SPD   
Sbjct: 21  PQLSLNGNDLAFVETRMLDEENTYSSNIFYLNTIKGNMPVQWTYGKHRNHSPRWSPDGDS 80

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-----------T 364
           I F SDR+GK Q+YVM   G + ++++     +   PVWSP G  I F           T
Sbjct: 81  IAFVSDRDGKSQIYVMSKAGGEARQLTHCANGAS-KPVWSPDGKKIVFNLSVKPGEDAET 139

Query: 365 KFSGEK-------FAIGVMK---------------------KDGSQERLLVEDSNLQAPT 396
           K + EK         I  MK                     + G  E+L   + + Q   
Sbjct: 140 KENQEKQTDRPLPLEIEKMKHKSDAQGFWSGRYSQVALIDIETGGMEQLTSGEHDYQLQD 199

Query: 397 WSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQW 442
           WSP G+ +      S  KD    S +Y I L  ++ + + N   Y     W
Sbjct: 200 WSPDGKWIAVTADLSEDKDFSFLSDVYIIHLETKDMKRITNGKGYFGSATW 250


>gi|262197963|ref|YP_003269172.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262081310|gb|ACY17279.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1623

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 67/305 (21%), Positives = 129/305 (42%), Gaps = 31/305 (10%)

Query: 148  PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-----VVSGIIKNSLCVMDRDGAN 202
            PA WR++A      I Q +       +S + F + S     V +     ++ V   DG  
Sbjct: 952  PAPWRELAQGA---IQQQVADVVLRHDSSVWFAAYSPDGARVATATFDGTVRVWRADGTG 1008

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
               +    +  +    FSP+  +VA A+YD    +RV+  D      P  +      +  
Sbjct: 1009 EPLVLGKHENRVLSLTFSPDGARVASASYD--GTVRVW--DADGASPPTILSGHEMALYT 1064

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              FS +G R +++  ++    I++ D  S  T  L        SA +SPD ++IV  S+ 
Sbjct: 1065 VDFSPDGAR-IVTAAREGVARIWNAD-GSGETVVLRGHEGPVRSARFSPDGARIVTTSE- 1121

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               + + V  ++GS + R+ +   A+ +   +SP G  +A     G   +  V   D   
Sbjct: 1122 --DQTVRVWNADGSGEPRVLRGHTATVYSARFSPDGRRLASASLDG---SARVWDLDHPD 1176

Query: 383  ERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTP 434
            E ++      ++ A  +SP GR ++ +     D  ++++ ++  G + TL      +N+ 
Sbjct: 1177 ESVIFNGHQGDVYAAVFSPDGRRVVTA---SADGTARVWDLERPGHSTTLRGHRDGVNSA 1233

Query: 435  AYASD 439
             ++ D
Sbjct: 1234 DFSPD 1238



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 56/274 (20%), Positives = 112/274 (40%), Gaps = 22/274 (8%)

Query: 167  TGEK---GDFNSRILFVSES-----VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            TGE    G   +R+L ++ S     V S     ++ V D DGA+   +    +  L+   
Sbjct: 1007 TGEPLVLGKHENRVLSLTFSPDGARVASASYDGTVRVWDADGASPPTILSGHEMALYTVD 1066

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+  ++  A    E + R++  D   +    R       + + RFS +G R +++  +
Sbjct: 1067 FSPDGARIVTAA--REGVARIWNADGSGETVVLR--GHEGPVRSARFSPDGAR-IVTTSE 1121

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D+ + +++ D  S     L        SA +SPD  ++   +  +G  +++ +  +  D+
Sbjct: 1122 DQTVRVWNAD-GSGEPRVLRGHTATVYSARFSPDGRRLA-SASLDGSARVWDL--DHPDE 1177

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
              I    +   +  V+SP G  +      G    +  +++ G    L      + +  +S
Sbjct: 1178 SVIFNGHQGDVYAAVFSPDGRRVVTASADGTA-RVWDLERPGHSTTLRGHRDGVNSADFS 1236

Query: 399  PSG-RSLIFSRKKDG---DTGSKLYSIDLNGRNE 428
            P G R L  S  +     +     Y++ L G  +
Sbjct: 1237 PDGARILTASEDRTARIWNVAELAYTVHLRGHEQ 1270


>gi|163845964|ref|YP_001634008.1| peptidase S41 [Chloroflexus aurantiacus J-10-fl]
 gi|222523689|ref|YP_002568159.1| peptidase S41 [Chloroflexus sp. Y-400-fl]
 gi|163667253|gb|ABY33619.1| peptidase S41 [Chloroflexus aurantiacus J-10-fl]
 gi|222447568|gb|ACM51834.1| peptidase S41 [Chloroflexus sp. Y-400-fl]
          Length = 1062

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 74/336 (22%), Positives = 132/336 (39%), Gaps = 58/336 (17%)

Query: 151 WRKIAHTIS---------DDIYQSITGEKGDFNSRILFVSE---SVVSGIIKNSLCVMDR 198
           WR+  H  S         D  Y+++    G F  R+++  +    + +   +    V D 
Sbjct: 160 WRRGPHPFSSNEIWLGPTDPDYRALCQIAGPFGQRLVYAGKLGWPLWAPDGQGLYIVCDS 219

Query: 199 DG-----------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV-------- 239
           DG              R +T  RD  L  P  +  +  V      D  + R+        
Sbjct: 220 DGNENLWYLPLGEGEARQITHFRDGRLLFPAIA-RRNNVIVCERGDGQLWRIDPISGESV 278

Query: 240 -YLMDTRID--RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV----DLQSN 292
              +  RID  R P R+  + S     R S +GK+  I  + D   D        DL+  
Sbjct: 279 PVPIRVRIDSKRTPVRVERWTSGFSEVRLSPDGKKLAIVARGDVFADFADKETDRDLRQG 338

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              R+TNT     S +++PDS ++++ SDR G+ +L+    +   ++++++D       P
Sbjct: 339 PAFRVTNTPAREWSIAWAPDSQRLIYLSDRYGEVELFAYDFSSGQEQQLTRDGRPKML-P 397

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKK 410
             +P G  IA+ +   ++  I V++      R + +     A    WSP  R L F  + 
Sbjct: 398 RIAPDGKSIAYIR---DQRIIEVIEVTDPSPREVCQARFAVAADLCWSPDSRYLAFIAQD 454

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           D     +L+S         +   PA   +P+ + F+
Sbjct: 455 D-----RLFS--------NVYIVPAAGGEPRQITFL 477



 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 3/85 (3%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D++ V ++    ERLT     +    +SPD  +I+F + R+G   LYV+   G   ++
Sbjct: 25  AGDVWLVSIEGGVAERLTAHPASHYGPRFSPDGQRILFSAGRDGSGDLYVLDLAGGPPRQ 84

Query: 341 IS-QDKEASYFDPVWSPQGDLIAFT 364
           I+ QD++ +  D  W+  GD + FT
Sbjct: 85  ITFQDEQCTPED--WANDGDAVFFT 107



 Score = 44.3 bits (103), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 85/222 (38%), Gaps = 27/222 (12%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +L +P   P+ + +A+    D     V+L+      A +R+    +    PRFS +G+R 
Sbjct: 7   LLRQPALDPDGRLLAFIAAGD-----VWLVSIEGGVA-ERLTAHPASHYGPRFSPDGQRI 60

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVM 331
           L S  +D + D+Y +DL      ++T          ++ D   + F +  E     +Y +
Sbjct: 61  LFSAGRDGSGDLYVLDLAGGPPRQITFQDEQCTPEDWANDGDAVFFTTAIEQMGSAIYRV 120

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------------FSGEKFAIGVMKKD 379
           +++G     I  +          SP G  +AF              FS  +  +G    D
Sbjct: 121 KTSGGTPAPIYLEPYEQLGQVAVSPDGTRLAFVNIRERWWRRGPHPFSSNEIWLGPTDPD 180

Query: 380 --------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                   G   + LV    L  P W+P G+ L      DG+
Sbjct: 181 YRALCQIAGPFGQRLVYAGKLGWPLWAPDGQGLYIVCDSDGN 222


>gi|148554693|ref|YP_001262275.1| amidohydrolase [Sphingomonas wittichii RW1]
 gi|148499883|gb|ABQ68137.1| amidohydrolase [Sphingomonas wittichii RW1]
          Length = 1010

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 11/125 (8%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           APK +      IL P  S +GK    +   D    ++ + +      RLTN  F++I  +
Sbjct: 320 APKPVKG----ILHPVVSPDGKYVAFTALSD----LWLLKIGDPKPVRLTNDPFVDIDPA 371

Query: 309 YSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +SPD S++ + SDR   G   LYV       ++R+++  E S   PV+SP G  IA T  
Sbjct: 372 WSPDGSRLAYTSDRRGVGTMDLYVRDMASGREERLTETTE-SVAAPVFSPDGKSIALTML 430

Query: 367 SGEKF 371
           + + +
Sbjct: 431 ASDDW 435



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 6/111 (5%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N +A+ SPD+++I    D +G  +L ++ + G     +      S   P WSP G LIAF
Sbjct: 43  NFTAAMSPDATRIAI--DLQG--ELRILPAKGGKAVVVPGLSGESRL-PSWSPDGKLIAF 97

Query: 364 TKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             + G  + I  +K DGS  R L    ++ + P WS  GRS++F+  + G+
Sbjct: 98  QYYLGGYWHIFTVKPDGSDLRQLSFGAADDREPVWSADGRSILFASDRAGN 148



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 14/104 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   + F +       L++++       R++ D      DP WSP G  +A+T    +
Sbjct: 333 SPDGKYVAFTA----LSDLWLLKIGDPKPVRLTNDPFVD-IDPAWSPDGSRLAYTS---D 384

Query: 370 KFAIGVMK------KDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +  +G M         G +ERL     ++ AP +SP G+S+  +
Sbjct: 385 RRGVGTMDLYVRDMASGREERLTETTESVAAPVFSPDGKSIALT 428


>gi|57237119|ref|YP_178131.1| translocation protein TolB [Campylobacter jejuni RM1221]
 gi|205356487|ref|ZP_03223251.1| periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421]
 gi|67461888|sp|Q5HX54|TOLB_CAMJR RecName: Full=Protein tolB; Flags: Precursor
 gi|57165923|gb|AAW34702.1| tolB protein, putative [Campylobacter jejuni RM1221]
 gi|205345674|gb|EDZ32313.1| periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421]
 gi|315057552|gb|ADT71881.1| tolB protein precursor [Campylobacter jejuni subsp. jejuni S3]
          Length = 402

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 12/196 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P++   +Q + Y T  D D   +Y  D   ++A K + +   M++A   S +G + L+++
Sbjct: 178 PKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKILSS-GGMVVASDVSVDGSKLLVTM 236

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYV--MQS 333
              +  D+Y  DL +    +LTN   I+++ ++   D S++VF SDR G   +++  + S
Sbjct: 237 APKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNS 296

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDS 390
           N ++Q        ++      S   D + ++     +   F I +M  +    R L  + 
Sbjct: 297 NSAEQVVFHGRNNSAV-----STYKDFLVYSSREPNQAGVFNIYLMSINSDYIRQLTANG 351

Query: 391 NLQAPTWSPSGRSLIF 406
               P +S  G S++F
Sbjct: 352 KNLFPRFSSDGGSIVF 367


>gi|86151349|ref|ZP_01069564.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315123714|ref|YP_004065718.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85841696|gb|EAQ58943.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315017436|gb|ADT65529.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 402

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 12/196 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P++   +Q + Y T  D D   +Y  D   ++A K + +   M++A   S +G + L+++
Sbjct: 178 PKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKILSS-GGMVVASDVSVDGSKLLVTM 236

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYV--MQS 333
              +  D+Y  DL +    +LTN   I+++ ++   D S++VF SDR G   +++  + S
Sbjct: 237 APKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNS 296

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDS 390
           N ++Q        ++      S   D + ++     +   F I +M  +    R L  + 
Sbjct: 297 NSAEQVVFHGRNNSAV-----STYKDFLVYSSREPNQAGVFNIYLMSINSDYIRQLTANG 351

Query: 391 NLQAPTWSPSGRSLIF 406
               P +S  G S++F
Sbjct: 352 KNLFPRFSSDGGSIVF 367


>gi|78049130|ref|YP_365305.1| putative regulatory protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78037560|emb|CAJ25305.1| putative regulatory protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 821

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 101/225 (44%), Gaps = 13/225 (5%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRA 272
             P  SP+  +VAYA+   +      L+ T  +  P+ +      +    P +S +G++ 
Sbjct: 271 LTPSLSPDGARVAYASLTSDRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGRQI 330

Query: 273 LISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQ 327
             S Q  +    + I +    + + E +       +S S+SPD   +VF S   + G  +
Sbjct: 331 AFSRQAPDGSCRVMIAAATGPAASREVMRCDGADMLSFSWSPDGRALVFGSMTGKHGAAR 390

Query: 328 LYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +  +       + +    +A  FD  P +SP G+ I F +         +  + G  ERL
Sbjct: 391 MRRLDLATGQWQTLDYPAQAGDFDYAPRYSPDGNWIVFLRNPQLGDLWRIPAEGGVAERL 450

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             ++++++  +W P G  LIF R+ D +  ++LY +DL  R+ +L
Sbjct: 451 THDNADIRGWSWLPDGSGLIFGRRVDSE--ARLYRLDL--RDHSL 491



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 7/143 (4%)

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +++ S SPD +++ + S   DR G   L     N   +   +     S   P WSP G  
Sbjct: 270 DLTPSLSPDGARVAYASLTSDRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGRQ 329

Query: 361 IAFTK----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           IAF++     S             S+E +  + +++ + +WSP GR+L+F         +
Sbjct: 330 IAFSRQAPDGSCRVMIAAATGPAASREVMRCDGADMLSFSWSPDGRALVFGSMTGKHGAA 389

Query: 417 KLYSIDLNGRNETLINTPAYASD 439
           ++  +DL       ++ PA A D
Sbjct: 390 RMRRLDLATGQWQTLDYPAQAGD 412


>gi|262194671|ref|YP_003265880.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262078018|gb|ACY13987.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1583

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 51/231 (22%), Positives = 109/231 (47%), Gaps = 15/231 (6%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +VS     ++ V + DG+    +    ++ +   RFSP+ +++  A++D    +R++  D
Sbjct: 1015 IVSASWDQTVRVWNADGSGRPIVLRGHEKAVMSARFSPDGRRIVSASWDRS--VRIWNAD 1072

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  P  +      + A  FS +G R ++S   D+++ ++  D     +  L +T  +
Sbjct: 1073 G--SGQPIVLRGHEDAVTAAVFSPDGTR-VVSASHDDSVRVWRADGSGKPSVLLGHTDDV 1129

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             ++AS+SPD+ +IV  S     + L V  ++G+ +  + +  +   F   +SP G  I  
Sbjct: 1130 -MAASFSPDNRRIVSASK---DQSLRVWPADGTGEPLLLRGHQDEVFSACFSPDGQRIVS 1185

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDG 412
              F     ++ +   DG+   +++     ++ +  +SP GR ++ S  KDG
Sbjct: 1186 ASFDN---SVRIWNADGAGVPVVLRGHRDDVLSARFSPDGRDIV-SASKDG 1232



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 66/273 (24%), Positives = 119/273 (43%), Gaps = 35/273 (12%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            + +VS    NS+ + + DGA +   L   RD +L   RFSP+ + +  A+ D    +RV+
Sbjct: 1181 QRIVSASFDNSVRIWNADGAGVPVVLRGHRDDVL-SARFSPDGRDIVSASKD--GTVRVW 1237

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT------ 294
                  D     +   R  + +  FS +G R ++S   D +  I++ D   +A       
Sbjct: 1238 GAH---DDNTAVLRGHRGRLYSATFSPDGAR-VVSASHDTSARIWNADGTGHAIVLNGHD 1293

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            E +T+       AS+SPD  ++V  S     + + +  ++G+    I +  +      V+
Sbjct: 1294 EGVTH-------ASFSPDGQRVVTAS---FDKSVRIWNADGTGDPMILRGHDDWVTSAVF 1343

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            SP G  +A   F     +I +   DGS +   LL   + + + ++SP GR +        
Sbjct: 1344 SPDGQRVASASFDK---SIRIWHADGSGDPVVLLGHTAQILSVSFSPDGRRVA---SASW 1397

Query: 413  DTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
            D   ++++ D  G  ET I    +    +WV F
Sbjct: 1398 DKTVRIWNAD--GSGETTI-LGEHEDTVRWVSF 1427



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 95/223 (42%), Gaps = 15/223 (6%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +VS     SL V   DG     L       +F   FSP+ Q++  A++D+   +R++  D
Sbjct: 1141 IVSASKDQSLRVWPADGTGEPLLLRGHQDEVFSACFSPDGQRIVSASFDNS--VRIWNAD 1198

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  P  +   R  +L+ RFS +G R ++S  KD  + ++     + A  R       
Sbjct: 1199 GA--GVPVVLRGHRDDVLSARFSPDG-RDIVSASKDGTVRVWGAHDDNTAVLRGHRGRL- 1254

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              SA++SPD +++V  S         +  ++G+    +    +       +SP G  +  
Sbjct: 1255 -YSATFSPDGARVVSASHDTSAR---IWNADGTGHAIVLNGHDEGVTHASFSPDGQRVVT 1310

Query: 364  TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
              F     ++ +   DG+ + +++   D  + +  +SP G+ +
Sbjct: 1311 ASFDK---SVRIWNADGTGDPMILRGHDDWVTSAVFSPDGQRV 1350



 Score = 40.8 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 61/289 (21%), Positives = 118/289 (40%), Gaps = 36/289 (12%)

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            EK   ++R       +VS     S+ + + DG+    +    +  +    FSP+  +V  
Sbjct: 1042 EKAVMSARFSPDGRRIVSASWDRSVRIWNADGSGQPIVLRGHEDAVTAAVFSPDGTRVVS 1101

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            A++DD   +RV+  D      P  +      ++A  FS + +R ++S  KD+++ ++  D
Sbjct: 1102 ASHDDS--VRVWRADG--SGKPSVLLGHTDDVMAASFSPDNRR-IVSASKDQSLRVWPAD 1156

Query: 289  -------LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
                   L+ +  E          SA +SPD  +IV  S       + +  ++G+    +
Sbjct: 1157 GTGEPLLLRGHQDEVF--------SACFSPDGQRIVSAS---FDNSVRIWNADGAGVPVV 1205

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
             +          +SP G  I      G     G    D +   L      L + T+SP G
Sbjct: 1206 LRGHRDDVLSARFSPDGRDIVSASKDGTVRVWGA--HDDNTAVLRGHRGRLYSATFSPDG 1263

Query: 402  RSLIFSRKKDGDTGSKLYSID-------LNGRNETLINTPAYASDPQWV 443
              ++ +     DT +++++ D       LNG +E + +  +++ D Q V
Sbjct: 1264 ARVVSASH---DTSARIWNADGTGHAIVLNGHDEGVTHA-SFSPDGQRV 1308


>gi|255009425|ref|ZP_05281551.1| putative exported tricorn protease [Bacteroides fragilis 3_1_12]
 gi|313147185|ref|ZP_07809378.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313135952|gb|EFR53312.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 1077

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 35/208 (16%)

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RF ++NGK  + S     A D+Y V       +RLT+ +   +   +SPD   I F    
Sbjct: 29  RFPATNGKEIVFSY----AGDLYKVPAAGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQY 84

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFTK-----F 366
           +G  ++Y M + G +  R+      S+D       P      W+P G  I +       F
Sbjct: 85  DGNTEVYTMPATGGEPLRVTYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGF 144

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSK 417
           SG+ F   V K+ G  E + + +      ++SP G+ L ++R            G     
Sbjct: 145 SGKLFT--VDKEGGLSEAIPLPEGGFC--SYSPDGKQLAYNRVMREFRTWKYYKGGMADD 200

Query: 418 LYSIDLNGRN-ETLINTPAYASDPQWVG 444
           ++  + N +  E + N  A    P W+G
Sbjct: 201 IWVYNPNSKTVENITNNVAQDIFPMWIG 228



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 85/391 (21%), Positives = 163/391 (41%), Gaps = 58/391 (14%)

Query: 47  PVSIAFTKFVSIDELGGKVSE-----VVSKDLQRSDVFNLISQDSFKQKITNPD------ 95
           P+ + +T   S D+LG ++         + D QR    N IS D F  K+   D      
Sbjct: 100 PLRVTYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRIS-DGFSGKLFTVDKEGGLS 158

Query: 96  -SIP----RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
            +IP     F  ++  G Q L   RV++E        FR W    +  +    +  +P S
Sbjct: 159 EAIPLPEGGFCSYSPDGKQ-LAYNRVMRE--------FRTWKYY-KGGMADDIWVYNPNS 208

Query: 151 --WRKIAHTISDDIYQSITGEKGDFNSRILFVSES-------VVSGIIKNSLCVMDRDGA 201
                I + ++ DI+    G++      I F+S+        V +   K +  V D    
Sbjct: 209 KTVENITNNVAQDIFPMWIGDE------IFFLSDRDRIMNIFVYNTKTKQTAKVTDFTEY 262

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           ++++ + S + I+FE        K+  AT   E +      D    R   + G   + + 
Sbjct: 263 DVKFPSASGNTIVFE--NGGYIYKMDAATRKAEKVNIALASDNIYARTDLKDG--ANYVT 318

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFES 320
           A   S +G R +++ + +    ++++ ++   T+ +T +   +   A +SPD +QI + S
Sbjct: 319 AASLSPDGARMVVTSRGE----VFNLPVEKGVTKNITRSPGAHDRDAQWSPDGTQIAYIS 374

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           D  G+ +LY+  + G +  +++   +    D  WSP    I +      K  + ++    
Sbjct: 375 DATGETELYLQNAAGGEPMQLTHKNDTYIRDFKWSPDSKKIVYMD---RKNRVNLLDVAS 431

Query: 381 SQERLLVEDSNLQAP---TWSPSGRSLIFSR 408
            +  LL++D  +  P   T+SP    L ++R
Sbjct: 432 GKVSLLLQDP-VGVPGGVTFSPDSEWLTYTR 461


>gi|256379057|ref|YP_003102717.1| amidohydrolase [Actinosynnema mirum DSM 43827]
 gi|255923360|gb|ACU38871.1| amidohydrolase [Actinosynnema mirum DSM 43827]
          Length = 1031

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 30/206 (14%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           I +P  S NG+   ++ +   A+ +  +D +  A   L +         + PD S +V+ 
Sbjct: 324 IASPVLSPNGRE--VAFRALGALWLLPLDGEPRA---LVDDGSFASDPDWRPDGSALVYT 378

Query: 320 SDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           SDR G   L+    + G+D +    D   +   P  +P G+ IAF    G  + +     
Sbjct: 379 SDRTGTPALWRHDLATGADTRLT--DLPGAQLTPRIAPDGERIAFQDADGATWVL----S 432

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFS-------RKKDG---------DTGSKLYSID 422
           DG   ++L        PTWSP GR+L  +       R ++G         DTG   Y+  
Sbjct: 433 DGVATQVLPALFQPGRPTWSPDGRTLALAAVKPLSRRYREGTNQILTVALDTGEVRYAEP 492

Query: 423 LNGRNETLI--NTPAYASDPQWVGFM 446
           L G++ +    + P ++ D +W+ F+
Sbjct: 493 LPGKSLSTRGDDGPVWSPDGRWLAFV 518



 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 7/134 (5%)

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           S A  R T T   NI+A+ SPD   I  +       +++++ ++G   + ++ D E    
Sbjct: 40  SGALRRFTATEGTNITAALSPDGRTIAIDL----YTRIWLLPASGGRARPLT-DPEQDAT 94

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            P +SP G  + F  +    + +  +  DG    R     ++ + P +SP GR++ +S  
Sbjct: 95  RPHFSPDGRSLVFQSYRDGNYHLWTIGVDGRGLRRRTSGPTDHREPRFSPDGRAIAYSGD 154

Query: 410 KDGDTGSKLYSIDL 423
              D G  L+ +DL
Sbjct: 155 AGAD-GYHLWLLDL 167



 Score = 36.6 bits (83), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 15/104 (14%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKK 410
           PV SP G  +AF        A+ ++  DG + R LV+D +  + P W P G +L+++  +
Sbjct: 327 PVLSPNGREVAFRALG----ALWLLPLDG-EPRALVDDGSFASDPDWRPDGSALVYTSDR 381

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGFMD 447
            G     L+  DL    +T +        TP  A D + + F D
Sbjct: 382 TGT--PALWRHDLATGADTRLTDLPGAQLTPRIAPDGERIAFQD 423


>gi|157414425|ref|YP_001481681.1| translocation protein TolB [Campylobacter jejuni subsp. jejuni
           81116]
 gi|283955556|ref|ZP_06373051.1| TolB protein, putative [Campylobacter jejuni subsp. jejuni 1336]
 gi|157385389|gb|ABV51704.1| TolB protein, putative [Campylobacter jejuni subsp. jejuni 81116]
 gi|283793017|gb|EFC31791.1| TolB protein, putative [Campylobacter jejuni subsp. jejuni 1336]
 gi|307747069|gb|ADN90339.1| Protein tolB [Campylobacter jejuni subsp. jejuni M1]
 gi|315931506|gb|EFV10473.1| tol-Pal system beta propeller repeat protein TolB [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 402

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 12/196 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P++   +Q + Y T  D D   +Y  D   ++A K + +   M++A   S +G + L+++
Sbjct: 178 PKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKILSS-GGMVVASDVSVDGSKLLVTM 236

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYV--MQS 333
              +  D+Y  DL +    +LTN   I+++ ++   D S++VF SDR G   +++  + S
Sbjct: 237 APKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNS 296

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDS 390
           N ++Q        ++      S   D + ++     +   F I +M  +    R L  + 
Sbjct: 297 NSAEQVVFHGRNNSAV-----STYKDFLVYSSREPNQAGVFNIYLMSINSDYIRQLTANG 351

Query: 391 NLQAPTWSPSGRSLIF 406
               P +S  G S++F
Sbjct: 352 KNLFPRFSSDGGSIVF 367


>gi|197122507|ref|YP_002134458.1| hypothetical protein AnaeK_2102 [Anaeromyxobacter sp. K]
 gi|196172356|gb|ACG73329.1| WD40 domain protein beta Propeller [Anaeromyxobacter sp. K]
          Length = 1078

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           + +  P  S +G+R    +Q+    D+     +  A  R+T+   ++   +++PD   ++
Sbjct: 500 AQVYGPAPSPDGRRIAFELQEGGRRDV--ALWEDGAVRRVTDDDALDTGPAWTPDGRYLL 557

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SDR G   LY  ++     ++++ + E+  F P  SP G  IAF  F  E + +  + 
Sbjct: 558 FASDRGGVYDLYAWEAATGALRQVT-NVESGAFQPAVSPDGRTIAFVTFGREGYDVATLP 616

Query: 378 KD 379
            D
Sbjct: 617 FD 618



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 93/237 (39%), Gaps = 59/237 (24%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR------SMILAPRFSSNG- 269
           PR+SP+   +AY   D             +DR P   G +R       + LA    +NG 
Sbjct: 346 PRWSPDGSFLAYQKRD-------------LDRRP---GTYRVTPGGADLGLALTVDANGA 389

Query: 270 ------KRALISVQKDEAM-----DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                 + A++++ +   +     D+++VDL   A  RLT+       A   P    +V+
Sbjct: 390 LSMASPREAVVAIGEVWRLHRTYDDLWAVDLARGARRRLTDGERAGDPAVV-PGGGAVVY 448

Query: 319 ESDREGKEQLYV---------MQSNGSDQKRISQ--------------DKEASYFDPVWS 355
                G     V         + ++ + ++R ++                 A  + P  S
Sbjct: 449 VRHEPGGRMALVRRTLPPAPMVPADVTIRERRAELAVPPPAQVEVLFARPGAQVYGPAPS 508

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           P G  IAF    G +  +  + +DG+  R+  +D+    P W+P GR L+F+  + G
Sbjct: 509 PDGRRIAFELQEGGRRDV-ALWEDGAVRRVTDDDALDTGPAWTPDGRYLLFASDRGG 564


>gi|320107933|ref|YP_004183523.1| transcriptional regulator CadC [Terriglobus saanensis SP1PR4]
 gi|319926454|gb|ADV83529.1| transcriptional regulator, CadC [Terriglobus saanensis SP1PR4]
          Length = 739

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 9/134 (6%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQK 339
            VD+QS+       +       S+  D+ ++ F  DR+         +L+  + +GS++ 
Sbjct: 456 GVDVQSDVEIYRPQSKDFGPVQSFLRDAHRLEFSRDRQWVAWADTNGRLWRARIDGSEKL 515

Query: 340 RISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTW 397
           +++ D     F   WSP G+ +A   + +G+ + I ++K DGS  ER+L E  N   PTW
Sbjct: 516 QLTPDA-IQVFLVRWSPDGNRLALMGRETGKAWQIYLVKADGSALERVLQESRNAGDPTW 574

Query: 398 SPSGRSLIFSRKKD 411
           SP G+SL F R  D
Sbjct: 575 SPDGKSLAFGRVPD 588



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 40/164 (24%)

Query: 309 YSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +SPD +++       GK  Q+Y+++++GS  +R+ Q+   +  DP WSP G  +AF +  
Sbjct: 529 WSPDGNRLALMGRETGKAWQIYLVKADGSALERVLQESRNAG-DPTWSPDGKSLAFGRVP 587

Query: 368 G------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                  E   + ++  D    + L    NL +P WSP GR               + +I
Sbjct: 588 DLMGKEEEARMVQIVDLDTRAVQTLPGSENLFSPRWSPDGR--------------HIAAI 633

Query: 422 DLNGRNETLINTP-------AYAS--DPQWV---------GFMD 447
            L+ R   L +T        AY S  DP W          GFMD
Sbjct: 634 SLDQRRLMLYDTATHQWRQLAYGSFADPVWTSDNQAIIAHGFMD 677



 Score = 37.7 bits (86), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 63/150 (42%), Gaps = 12/150 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKR-ALISV 276
           FS ++Q VA+A  +        L   RID + K ++      +   R+S +G R AL+  
Sbjct: 488 FSRDRQWVAWADTNGR------LWRARIDGSEKLQLTPDAIQVFLVRWSPDGNRLALMGR 541

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSN 334
           +  +A  IY V    +A ER+          ++SPD   + F    D  GKE+   M   
Sbjct: 542 ETGKAWQIYLVKADGSALERVLQESRNAGDPTWSPDGKSLAFGRVPDLMGKEEEARMVQI 601

Query: 335 GSDQKRISQDKEAS--YFDPVWSPQGDLIA 362
                R  Q    S   F P WSP G  IA
Sbjct: 602 VDLDTRAVQTLPGSENLFSPRWSPDGRHIA 631


>gi|148907920|gb|ABR17080.1| unknown [Picea sitchensis]
          Length = 714

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 26/217 (11%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-------IGNFRSMILAPRFSSNG 269
           P FSP+   +AY    + +   VY+M  R+D + +R        G          ++S G
Sbjct: 420 PSFSPDGSLIAYIP--NIEYSGVYVM--RLDGSGRRKIFSGAAFGTAWDWKRGVVYTSAG 475

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI----NISASYSPDSSQIVFESDREGK 325
                     + + IY+ D +  +   ++         N   S SPD   +VF S R G 
Sbjct: 476 PGFETETTTVDIVAIYNADREGTSESEISYKTLTKEGNNAFPSPSPDGKFVVFRSGRTGH 535

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAF-----TKFSGEKFAIGVMKK 378
           + LY+M +   ++  + Q  E  + D +  WSP G+ IAF     +  SG  FA+  +  
Sbjct: 536 KNLYIMDAEEGEEGGLWQLTEGPWTDTMCNWSPDGEWIAFASDRDSPGSG-GFAMYFIHP 594

Query: 379 DGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDG 412
           +G+    ++  S    +  P +SP  +SL+F+    G
Sbjct: 595 NGTGLHRVLNSSTAGRVNHPWFSPDSKSLVFTSDYAG 631


>gi|121613592|ref|YP_999836.1| translocation protein TolB [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167004807|ref|ZP_02270565.1| translocation protein TolB [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87250020|gb|EAQ72978.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 402

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 12/196 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P++   +Q + Y T  D D   +Y  D   ++A K + +   M++A   S +G + L+++
Sbjct: 178 PKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKILSS-GGMVVASDVSVDGSKLLVTM 236

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYV--MQS 333
              +  D+Y  DL +    +LTN   I+++ ++   D S++VF SDR G   +++  + S
Sbjct: 237 APKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNS 296

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDS 390
           N ++Q        ++      S   D + ++     +   F I +M  +    R L  + 
Sbjct: 297 NSAEQVVFHGRNNSAV-----STYKDFLVYSSREPNQAGVFNIYLMSINSDYIRQLTANG 351

Query: 391 NLQAPTWSPSGRSLIF 406
               P +S  G S++F
Sbjct: 352 KNLFPRFSSDGGSIVF 367


>gi|220918187|ref|YP_002493491.1| WD40 domain protein beta Propeller [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956041|gb|ACL66425.1| WD40 domain protein beta Propeller [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 704

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 11/178 (6%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP    +G+      ++     +  VD        +T+ L ++ + ++ PD   I   + 
Sbjct: 497 APAVRRDGRTIAFWTREGGRTRLRVVDADGTGGRVVTDALQLSGAPAWMPDGRSIAVGAI 556

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDG 380
            EG  +L+ +  +G +   +  +  A   DP WSP GDL+AFT    G  F +  +  DG
Sbjct: 557 VEGAPRLFRVPLDGGEPAALVAEPSA---DPAWSPAGDLLAFTGADVGTTFPLRAVNADG 613

Query: 381 SQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSIDL-NGRNETLINTP 434
           S  R+  L      +   + P GRS+   R   G+   K L ++DL +G +  L+  P
Sbjct: 614 SAHRMPPLTLTRGARHVAFLPDGRSIAVLR---GEIRRKHLAAVDLASGASRRLVVLP 668


>gi|309792445|ref|ZP_07686910.1| WD40 domain-containing protein [Oscillochloris trichoides DG6]
 gi|308225517|gb|EFO79280.1| WD40 domain-containing protein [Oscillochloris trichoides DG6]
          Length = 627

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 81/207 (39%), Gaps = 64/207 (30%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L N    N +ASYSPD ++IVF +DR G ++L++M    +   +++  +      P WSP
Sbjct: 424 LPNNTANNYNASYSPDGTKIVFVTDRWGGQELFIMTPTANSPTQLT-GQGCINESPTWSP 482

Query: 357 QGDLIAFT-----------------------------------------KFS-----GEK 370
            G  + +T                                         +F      G+ 
Sbjct: 483 NGRHLYWTSNCDGDFDIYRGEIAYNYEGTWSVDARLVNVVNLTNNNVDDRFPRVSPDGKT 542

Query: 371 FAIGVMKKDGSQE-------------RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            A G   +DG+ E             RL   ++   +PTWS  G  L F+  +DGD   +
Sbjct: 543 VAFG-SNRDGNWEIYTMSSASGDTLRRLTSNNATDDSPTWSADGSKLAFASDRDGDF--E 599

Query: 418 LYSIDLNGRNETLI-NTPAYASDPQWV 443
           +Y++ L+G N T I N  A    P W 
Sbjct: 600 IYTMTLDGNNTTQITNNSAQDRWPLWA 626



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 75/188 (39%), Gaps = 14/188 (7%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +   +SP+  K+ + T D      +++M T    +P ++     +  +P +S NG+    
Sbjct: 432 YNASYSPDGTKIVFVT-DRWGGQELFIM-TPTANSPTQLTGQGCINESPTWSPNGRHLYW 489

Query: 275 SVQKDEAMDIY------------SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           +   D   DIY            SVD +      LTN    +     SPD   + F S+R
Sbjct: 490 TSNCDGDFDIYRGEIAYNYEGTWSVDARLVNVVNLTNNNVDDRFPRVSPDGKTVAFGSNR 549

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G  ++Y M S   D  R      A+   P WS  G  +AF       F I  M  DG+ 
Sbjct: 550 DGNWEIYTMSSASGDTLRRLTSNNATDDSPTWSADGSKLAFASDRDGDFEIYTMTLDGNN 609

Query: 383 ERLLVEDS 390
              +  +S
Sbjct: 610 TTQITNNS 617


>gi|255548307|ref|XP_002515210.1| conserved hypothetical protein [Ricinus communis]
 gi|223545690|gb|EEF47194.1| conserved hypothetical protein [Ricinus communis]
          Length = 618

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFD--PVWSPQGDL 360
           N   + SPD   +VF S R G + LY+M +  G  +  I    E +  D  P WSP+GDL
Sbjct: 390 NAFPACSPDGKYLVFRSGRSGHKNLYIMDAVEGEFKGDIRPLTEGACIDTMPCWSPKGDL 449

Query: 361 IAFTKF-----SGEKFAIGVMKKDGSQER 384
           IAF+           F+I V+K DGS  R
Sbjct: 450 IAFSSNRHKPEHANPFSIYVIKPDGSGLR 478



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 64/138 (46%), Gaps = 30/138 (21%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTK 365
           ASYSPDS  I F +     + L++++SNGS +  + S+D+ A Y    WSP    + +T 
Sbjct: 289 ASYSPDSDYIAFNAGL--SQGLHIVRSNGSKRWTLFSRDRTAFYTS--WSPTEKNVIYTT 344

Query: 366 FSGEKFA-------IGVMKKDGSQ------------ERLLVEDSNLQA-PTWSPSGRSLI 405
             G  FA       I  +  D S             + L  EDS   A P  SP G+ L+
Sbjct: 345 L-GPVFAHVNRTVQIARVTFDPSDLKPDRNEIPCDVKMLTGEDSGNNAFPACSPDGKYLV 403

Query: 406 FSRKKDGDTGSK-LYSID 422
           F   + G +G K LY +D
Sbjct: 404 F---RSGRSGHKNLYIMD 418


>gi|257067641|ref|YP_003153896.1| periplasmic component of the Tol biopolymer transport system
           [Brachybacterium faecium DSM 4810]
 gi|256558459|gb|ACU84306.1| periplasmic component of the Tol biopolymer transport system
           [Brachybacterium faecium DSM 4810]
          Length = 408

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 22/156 (14%)

Query: 272 ALISVQKDE-----AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---- 322
           A I VQ+ E        +++V     A   LT   F +  A YSPD + I F S+R    
Sbjct: 247 AYIGVQRLEDGTWLPPKVFTVPSSGGAPTPLTEDEFPDDGAEYSPDGAWIYFNSERARTV 306

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--------IG 374
            G  QL+ M+ +GS  ++++ D+  ++F P  SP G  +A+  F              + 
Sbjct: 307 PGHAQLFRMRPDGSGVEQLTDDERVNWF-PHLSPDGRRVAYVSFPPGTLGHPADRDVILR 365

Query: 375 VMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIF 406
           +   DG+  R LV        +   +W+P  R L +
Sbjct: 366 LCAPDGTGIRDLVRLHGGQGTMNVNSWAPDSRRLAY 401


>gi|148554692|ref|YP_001262274.1| amidohydrolase [Sphingomonas wittichii RW1]
 gi|148499882|gb|ABQ68136.1| amidohydrolase [Sphingomonas wittichii RW1]
          Length = 1014

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 2/82 (2%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +L+V+ + G     I+   + + + PVWSP G  IAF  ++ E + I V++ DGS+ +++
Sbjct: 58  RLWVLPATGGKATPITPVMDEARY-PVWSPDGRWIAFQYYTDENWHIAVVRPDGSELKVV 116

Query: 387 VEDS-NLQAPTWSPSGRSLIFS 407
                + + P+W P G++++FS
Sbjct: 117 TRGPYDDREPSWRPDGKAILFS 138



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 2/139 (1%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +S +G+        DE   I  V    +  + +T   + +   S+ PD   I+F SDR
Sbjct: 82  PVWSPDGRWIAFQYYTDENWHIAVVRPDGSELKVVTRGPYDDREPSWRPDGKAILFSSDR 141

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                L+ +  +   Q  ++   +A  + P  SP G   A+ + +G   ++ ++++ G  
Sbjct: 142 TRSLDLWQVTLDDGVQTSVTS-GDADDYHPAVSPDGGRTAYVQGTGRTTSL-IVEEAGKA 199

Query: 383 ERLLVEDSNLQAPTWSPSG 401
             L+    ++    WSP G
Sbjct: 200 RTLVSGKLSISRLHWSPDG 218



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 22/174 (12%)

Query: 260 ILAPRFSSNGKR---ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +  P+  +  KR   A  +VQ         +DL S     +   L      + SPD   +
Sbjct: 279 VWTPQGDTVAKRPFTAAFTVQDAPVYRKREIDLTSTGDRPVLGIL----RPTTSPDGRHV 334

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            F +       L+++        +++ D      DP WS  G  +A+     ++   G M
Sbjct: 335 AFTA----MGNLWMLTVGDPKPVQLTHDHFLD-VDPTWSRDGQWLAYVS---DRRGTGTM 386

Query: 377 K------KDGSQERLLVEDSNLQAPTWSPSGRSL-IFSRKKDGDTGSKLYSIDL 423
                    G++ RL   + +L  P++SP G+S+ +F R      G+ LY +D+
Sbjct: 387 DLYLRNVATGAERRLTQTEEDLMQPSFSPDGKSVAVFMRNSADWHGATLYLVDV 440


>gi|325280803|ref|YP_004253345.1| peptidase S41 [Odoribacter splanchnicus DSM 20712]
 gi|324312612|gb|ADY33165.1| peptidase S41 [Odoribacter splanchnicus DSM 20712]
          Length = 1110

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 19/179 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y  + +   T+R+TNT     S  +SPD   +V+  +R G   +YV +    D K  +
Sbjct: 337 DVYVANAEYGTTKRITNTATQERSVEFSPDGRSLVYAGERNGHWNIYVARIKDKDDKSFA 396

Query: 343 QDKEA----------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-----SQERLLV 387
             KE           + F P +SP G  IA+ +   E   I +  K       ++     
Sbjct: 397 YAKEIEEEQITKGTNACFQPSFSPDGKEIAYLENRTEIKVINLKSKKSRTVLPAKYNYSY 456

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDPQWV 443
           +D + Q   WSP GR ++    + G        L   D +G    L N+     +P+W+
Sbjct: 457 QDGD-QWYQWSPDGRWILAKYFEHGGWQHNDIALVKADGSGEIHNLTNSGYSDQNPKWM 514



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 12/158 (7%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P  SP+ + +A+    D     ++L+ +   RA  ++    +    P +S +GK    + 
Sbjct: 31  PAISPDGKTIAFCYKGD-----IFLVSSEGGRA-TQLTTHPAYDSRPVWSPDGKTIAFTS 84

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +DE +++Y+V +      RLT      I   ++PD  +I++ S+     +     S G 
Sbjct: 85  ARDEGLNLYTVPVSGGTPTRLTYYSGSEIPVCFTPDGKEILYRSNVMPDAEYGQFPSGGQ 144

Query: 337 ------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                 D  R  Q      FD  ++ +GD I +  + G
Sbjct: 145 VYKISVDGGRPEQFLTFDAFDINFNKKGDKIIYHDYKG 182



 Score = 36.6 bits (83), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 19/149 (12%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSP 356
           N L++   A  SPD   I F      K  ++++ S G    R +Q      +D  PVWSP
Sbjct: 24  NPLWMRYPA-ISPDGKTIAFCY----KGDIFLVSSEGG---RATQLTTHPAYDSRPVWSP 75

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD-- 413
            G  IAFT    E   +  +   G     L   S  + P  ++P G+ +++      D  
Sbjct: 76  DGKTIAFTSARDEGLNLYTVPVSGGTPTRLTYYSGSEIPVCFTPDGKEILYRSNVMPDAE 135

Query: 414 -----TGSKLYSIDLN-GRNETLINTPAY 436
                +G ++Y I ++ GR E  +   A+
Sbjct: 136 YGQFPSGGQVYKISVDGGRPEQFLTFDAF 164


>gi|291337042|gb|ADD96563.1| hypothetical protein [uncultured organism MedDCM-OCT-S11-C346]
          Length = 116

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 1/109 (0%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           + P +S +G+  L +    E  D+Y + L++   + L++   +N  A+ SPD  +I    
Sbjct: 1   MLPAWSRDGQSLLFTSYLRENPDLYRLHLKTRKLDWLSHKRGLNTGAAVSPDGKKIALTL 60

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             +G  ++Y+M  +G +  R++ D       P WSP G  IA +  + E
Sbjct: 61  SIDGNTEIYLMDPDGKNLTRLT-DSWGQDISPTWSPDGKRIALSAHALE 108



 Score = 39.7 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 217 PRFSPNQQKVAYATY--DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           P +S + Q + + +Y  ++ D+ R++L   ++D    +    R +      S +GK+  +
Sbjct: 3   PAWSRDGQSLLFTSYLRENPDLYRLHLKTRKLDWLSHK----RGLNTGAAVSPDGKKIAL 58

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           ++  D   +IY +D       RLT++   +IS ++SPD  +I   +
Sbjct: 59  TLSIDGNTEIYLMDPDGKNLTRLTDSWGQDISPTWSPDGKRIALSA 104


>gi|153951205|ref|YP_001397366.1| translocation protein TolB [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152938651|gb|ABS43392.1| putative tolB protein [Campylobacter jejuni subsp. doylei 269.97]
          Length = 402

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 12/196 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P++   +Q + Y T  D D   +Y  D   ++A K + +   M++A   S +G + L+++
Sbjct: 178 PKWGNKEQTLFYYTAYDHDRPTLYRYDLNTNKASKILSS-GGMVVASDVSVDGSKLLVTM 236

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYV--MQS 333
              +  D+Y  DL +    +LTN   I+++ ++   D S++VF SDR G   +++  + S
Sbjct: 237 APKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNS 296

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDS 390
           N ++Q        ++      S   D + ++     +   F I +M  +    R L  + 
Sbjct: 297 NSAEQVVFHGRNNSAV-----STYKDFLVYSSREPNQAGVFNIYLMSINSDYIRQLTANG 351

Query: 391 NLQAPTWSPSGRSLIF 406
               P +S  G S++F
Sbjct: 352 KNLFPRFSSDGGSIVF 367


>gi|170693891|ref|ZP_02885048.1| hypothetical protein BgramDRAFT_3858 [Burkholderia graminis C4D1M]
 gi|170141309|gb|EDT09480.1| hypothetical protein BgramDRAFT_3858 [Burkholderia graminis C4D1M]
          Length = 642

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 77/173 (44%), Gaps = 31/173 (17%)

Query: 265 FSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSP-DSSQIVFESD 321
           FS +G+  + + ++D A   ++Y V +     ERLT+ + ++ +A +SP D + I F S 
Sbjct: 78  FSKDGQWLVFTSERDGAGQSNLYRVKVDGTGLERLTDHIAVDDAAVFSPTDPNVIAFVSS 137

Query: 322 REGKEQLYVMQ-----------SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           R G +                 +N +        +   YF P WSP G  +A +  +G  
Sbjct: 138 RRGNDGFGTTNVWTLNLSTGALNNVTGSLGFDPTRPHGYFRPSWSPDGKWLALSSDTGSD 197

Query: 371 F---------------AIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIF 406
           +               +I +++ DGS  + +  V   +  +P+WSP G+ ++F
Sbjct: 198 WRGHNLPTGWERTQESSIYIVRPDGSGWKKIAGVSGYDEGSPSWSPDGKRVVF 250



 Score = 41.6 bits (96), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 42/207 (20%), Positives = 85/207 (41%), Gaps = 33/207 (15%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLM 242
           G + + L + + DG   R L PS     +   FS + Q + + +  D     ++ RV + 
Sbjct: 47  GPVSSELYISNADGTGERKLIPSTG-FDYHASFSKDGQWLVFTSERDGAGQSNLYRVKVD 105

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----AMDIYSVDLQSNATERLT 298
            T ++R    I    + + +P  +     A +S ++        ++++++L + A   +T
Sbjct: 106 GTGLERLTDHIAVDDAAVFSP--TDPNVIAFVSSRRGNDGFGTTNVWTLNLSTGALNNVT 163

Query: 299 NTLFINIS-------ASYSPDSSQIVFESD---------------REGKEQLYVMQSNGS 336
            +L  + +        S+SPD   +   SD               R  +  +Y+++ +GS
Sbjct: 164 GSLGFDPTRPHGYFRPSWSPDGKWLALSSDTGSDWRGHNLPTGWERTQESSIYIVRPDGS 223

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAF 363
             K+I+         P WSP G  + F
Sbjct: 224 GWKKIAGVSGYDEGSPSWSPDGKRVVF 250



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 20/144 (13%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FT 364
           +SS  V   +  G  ++Y   ++G D   I+Q   A  F P WSP    +A       FT
Sbjct: 394 NSSIAVANPNLSGYTRIYDPATSGLDPAAIAQGL-AGAFQPAWSPDRQWVAFGVGNWFFT 452

Query: 365 KFSGEKFAIGVMKKDGS---QERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + +G    I  ++ DGS   Q   L + S N   P++SP G+ L++    D   G ++  
Sbjct: 453 RSTGPA-QIMRIRADGSMNGQAEALTDGSINSGFPSYSPDGKKLVYRVWSDAVQGLRI-- 509

Query: 421 IDLNGRNETLI-----NTPAYASD 439
           +DL  R+ T++     N P ++ D
Sbjct: 510 LDLATRSTTVLTSGADNLPGWSPD 533


>gi|307354076|ref|YP_003895127.1| hypothetical protein Mpet_1938 [Methanoplanus petrolearius DSM
           11571]
 gi|307157309|gb|ADN36689.1| hypothetical protein Mpet_1938 [Methanoplanus petrolearius DSM
           11571]
          Length = 457

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 32/179 (17%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFESDREGKE--- 326
           L+    +    +  V  Q ++   ++N  F   S +Y   SPD ++I   S  E KE   
Sbjct: 26  LVPAVAESNFTLSPVQPQLSSPYEISNLTFCGESCNYAVGSPDGTEIAL-SCMEWKEPCS 84

Query: 327 -------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-------TKF 366
                         L++M+S+GS + +IS      +  P+WSP+GD IA        T  
Sbjct: 85  CSYSCLGCAEDDPHLFLMKSDGSGKHQISNLN--IFGVPLWSPKGDAIAIKGLEKSGTPM 142

Query: 367 SGEKFA---IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            G +++   I ++  D + E LLV  S+  A  WSP GR L +    + +    + S+D
Sbjct: 143 DGFRYSNEGIWMVSVDTNDEYLLVNSSDAWAAAWSPDGRFLAYILYNEENITVNIISVD 201


>gi|305667382|ref|YP_003863669.1| hypothetical protein FB2170_14083 [Maribacter sp. HTCC2170]
 gi|88709430|gb|EAR01663.1| hypothetical protein FB2170_14083 [Maribacter sp. HTCC2170]
          Length = 1098

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 10/111 (9%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-IYSVDLQSNATERLTNTLFINISAS 308
           PKR+    ++   P FS++GK+ +     DE++  I+S+ +      +LT    I  + +
Sbjct: 396 PKRLTKSENLEFEPSFSADGKKLVYVSWNDESLGAIHSIPVTGGTPSKLTTQKGIYRTPT 455

Query: 309 YSPDSSQIVFESDREGKEQ---------LYVMQSNGSDQKRISQDKEASYF 350
           YSPD   IV+  +    +Q         LY M +NG++ K IS++ E   F
Sbjct: 456 YSPDGKMIVYGKESGNNDQGRTFSKKSGLYTMSANGTNPKWISKEGEYPQF 506



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 75/180 (41%), Gaps = 21/180 (11%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIYS+ +     + L   +   I   +SP+  +I F SD  G + ++ M  +GSD K+I+
Sbjct: 73  DIYSIPITGGNAKILRTGIPFEIQPRFSPNGKKIAFTSDAGGGDNIWTMNIDGSDAKQIT 132

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQ-ERLLVEDSNLQ 393
           ++K     +  W P G+     K         +GE +   +    G Q  +   +  ++ 
Sbjct: 133 KEKFRLLNNVSWMPDGNYFVARKHFTSQRSLGAGELWQYHISGGSGLQLTKRKNDQQDVN 192

Query: 394 APTWSPSGRSLIFSR--------KKDGDTGSKLYSIDL----NGRNETLINTPAYASDPQ 441
            P  SP G+ + +S         + + D   ++Y I       G+   +   P  A+ PQ
Sbjct: 193 EPNISPDGKYMYYSEDVYPGGYFQYNKDPNKQIYVIKRYDFETGKTIIVTGGPGGAARPQ 252



 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 84/182 (46%), Gaps = 21/182 (11%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRIS 342
           +++  L +   +RLT +  +    S+S D  ++V+ S + E    ++ +   G    +++
Sbjct: 386 LWTKRLPNGKPKRLTKSENLEFEPSFSADGKKLVYVSWNDESLGAIHSIPVTGGTPSKLT 445

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSG---------EKFAIGVMKKDGSQERLLVEDSNLQ 393
             K   Y  P +SP G +I + K SG         +K  +  M  +G+  + + ++   +
Sbjct: 446 TQK-GIYRTPTYSPDGKMIVYGKESGNNDQGRTFSKKSGLYTMSANGTNPKWISKEG--E 502

Query: 394 APTWSPSGRSLIFSRKKD--GDTGSKLYSIDLNGRNETLINTPAYAS------DPQWVGF 445
            P ++ +G+ + +       G+    L+SIDLNG+++       YA+      D +WV F
Sbjct: 503 YPQFTANGKRIFYRTGGTYFGNLTKTLHSIDLNGKDKRNHIKSKYANLLVPSPDNKWVAF 562

Query: 446 MD 447
            +
Sbjct: 563 TN 564



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 26/139 (18%), Positives = 60/139 (43%), Gaps = 12/139 (8%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  SPD   +VF +       L+  +      KR+++ +    F+P +S  G  + +  +
Sbjct: 369 AVTSPDKKTLVFSA----LGHLWTKRLPNGKPKRLTKSENLE-FEPSFSADGKKLVYVSW 423

Query: 367 SGEKFAI--GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           + E       +    G+  +L  +    + PT+SP G+ +++ ++   +   + +S    
Sbjct: 424 NDESLGAIHSIPVTGGTPSKLTTQKGIYRTPTYSPDGKMIVYGKESGNNDQGRTFS---- 479

Query: 425 GRNETLINTPAYASDPQWV 443
            +   L    A  ++P+W+
Sbjct: 480 -KKSGLYTMSANGTNPKWI 497


>gi|149174000|ref|ZP_01852628.1| probable TolB protein (Precursor) [Planctomyces maris DSM 8797]
 gi|148846980|gb|EDL61315.1| probable TolB protein (Precursor) [Planctomyces maris DSM 8797]
          Length = 310

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 75/156 (48%), Gaps = 25/156 (16%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S S+S D  +++F+       +   + ++ V+ ++GS+ K +   +      P WSP G+
Sbjct: 63  SPSFSADGQKLLFDGWKSQAGETSIQAKIIVVNADGSNLKVLGPGRM-----PSWSPGGN 117

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAF++ +   + + +M  DGS   L+  D+      WSP+GR L +S   +G    ++Y
Sbjct: 118 RIAFSQHA--PYGVAIMHADGSHRTLI--DAGGWGAQWSPNGRKLAYSFPVNGRGNIRIY 173

Query: 420 SI------DLNGRNETLINTP----AYASDPQWVGF 445
            +      DL    E+   +     A++ D QW+ F
Sbjct: 174 DLIEGTKTDLFPAGESPYTSVYWNMAWSPDSQWLCF 209



 Score = 43.1 bits (100), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 43/194 (22%), Positives = 82/194 (42%), Gaps = 33/194 (17%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           I+  + V++ DG+N++ L P R      P +SP   ++A++ +    +  ++        
Sbjct: 87  IQAKIIVVNADGSNLKVLGPGR-----MPSWSPGGNRIAFSQHAPYGVAIMH-------- 133

Query: 249 APKRIGNFRSMILA----PRFSSNGKRALISVQKDEAMDIYSVDLQSN-------ATERL 297
                G+ R++I A     ++S NG++   S   +   +I   DL          A E  
Sbjct: 134 ---ADGSHRTLIDAGGWGAQWSPNGRKLAYSFPVNGRGNIRIYDLIEGTKTDLFPAGESP 190

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ----KRISQDKEASYFDPV 353
             +++ N+  ++SPDS  + F+  R       V   N + +    K     + A Y D  
Sbjct: 191 YTSVYWNM--AWSPDSQWLCFKGCRAEDRSFDVATINIAGKQAGYKVHYHHETAPYADFA 248

Query: 354 WSPQGDLIAFTKFS 367
           W P G++I F   +
Sbjct: 249 WHPVGEVIVFCPHT 262


>gi|256377038|ref|YP_003100698.1| hypothetical protein Amir_2931 [Actinosynnema mirum DSM 43827]
 gi|255921341|gb|ACU36852.1| WD40 domain protein beta Propeller [Actinosynnema mirum DSM 43827]
          Length = 1029

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 34/139 (24%)

Query: 308 SYSPDSSQIVFESDREGK-----EQLYVMQSNGSDQKRIS-QDKEAS--YFDPVWSPQGD 359
           +YSPD  +IV+ +  EG      ++++   ++GSD  R++  D+  +   FDP WSP G+
Sbjct: 380 TYSPDGRKIVYTA-FEGPLGSRLQRIWTANADGSDPVRLNVSDRLPTDWEFDPAWSPNGE 438

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLV------------------EDSNLQAPTWSPSG 401
            IA T+ S      G ++ D    R+ V                  ED     P WSP G
Sbjct: 439 QIAITRRS-----PGGIRPDNGPSRIAVVDASTGQVLRELVAPPGAEDQEDTQPAWSPDG 493

Query: 402 RSLIFSRKK--DGDTGSKL 418
           R+L F+R    D +TG+++
Sbjct: 494 RTLSFTRGVVFDDETGTEV 512


>gi|198274139|ref|ZP_03206671.1| hypothetical protein BACPLE_00276 [Bacteroides plebeius DSM 17135]
 gi|198273217|gb|EDY97486.1| hypothetical protein BACPLE_00276 [Bacteroides plebeius DSM 17135]
          Length = 1084

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R S +GK  L   + D    IY V  +     +LT       S  +SPD  QI F SDR 
Sbjct: 30  RISPDGKEILFCYKGD----IYKVSAKGGEAVQLTTQESYESSPVWSPDGKQIAFASDRF 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           G   ++VM +NG   +R++ +  AS     ++P G  I F+
Sbjct: 86  GNTDVFVMPANGGSARRLTTNS-ASEIPSAFTPDGKFIVFS 125



 Score = 45.4 bits (106), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 61/137 (44%), Gaps = 16/137 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I+F      K  +Y + + G +  +++  +E+    PVWSP G  IAF      
Sbjct: 32  SPDGKEILFCY----KGDIYKVSAKGGEAVQLTT-QESYESSPVWSPDGKQIAFASDRFG 86

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDL----- 423
              + VM  +G   R L  +S  + P+ ++P G+ ++FS        S L+         
Sbjct: 87  NTDVFVMPANGGSARRLTTNSASEIPSAFTPDGKFIVFSASIQDPASSALFPTSAMTELY 146

Query: 424 -----NGRNETLINTPA 435
                 G+ E ++ TPA
Sbjct: 147 KVSAEGGKTEQILGTPA 163



 Score = 40.4 bits (93), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 79/181 (43%), Gaps = 23/181 (12%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD----- 337
           +++   ++   T+++T+T       S+  D+  +V+ S+R+G  QLY  +    +     
Sbjct: 337 EVFVTSVEYGTTKQITHTPEAEEGLSFGADNRTLVYASERDGNWQLYKAEIERKEDLNFP 396

Query: 338 ------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                 ++ +   K      P +SP G  +AF +   ++  + V+  + ++ R + + S 
Sbjct: 397 NATLIKEEVLLPSKTVERMYPKFSPDGKEVAFIE---DRIRLKVLNLETNKVRQITDGST 453

Query: 392 LQAPT------WSPSGR--SLIF-SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             + +      WSP G+  +L F   K D  T   L S D  G    L N+   +S P+W
Sbjct: 454 WYSLSGGFNYAWSPDGKWFTLEFIGNKHDPYTDIALVSADGKGELVNLTNSGYTSSSPKW 513

Query: 443 V 443
            
Sbjct: 514 T 514


>gi|239990874|ref|ZP_04711538.1| hypothetical protein SrosN1_26444 [Streptomyces roseosporus NRRL
           11379]
          Length = 842

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 20/160 (12%)

Query: 298 TNTLFINISASYSPDSSQ----IVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ LF +  A Y  D S     +VF S R+  K Q+Y+  ++GS  +R++  ++A+   P
Sbjct: 75  TDPLFGDGPAHYDQDPSARGDVLVFTSLRDSAKPQVYIRGADGS-VRRLTDGRDAAR--P 131

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKD-------GSQERLLVEDS-NLQAPTWSPSGRSL 404
             SP G  + F   S E    G +++D       GS  R L + + N ++PTWSP G  +
Sbjct: 132 ELSPDGRTVVFD--SAEPGPGGTVQRDLWSVGVDGSNLRRLTDTADNEESPTWSPDGTRI 189

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQW 442
            ++   D   G ++Y  D+ G  +T I+      A++P W
Sbjct: 190 AYACDGDAVLGWQIYVRDVAGGPQTRISDAGGGDATEPSW 229



 Score = 45.1 bits (105), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 24/144 (16%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKR 340
           D++SV +  +   RLT+T     S ++SPD ++I +  D +     Q+YV    G  Q R
Sbjct: 156 DLWSVGVDGSNLRRLTDTADNEESPTWSPDGTRIAYACDGDAVLGWQIYVRDVAGGPQTR 215

Query: 341 ISQDKEASYFDPVWSPQGD-----LIAFTKFSGEKFAIGVMKKDGSQ---------ERLL 386
           IS        +P W+P  D      +A+T  +     +     DG++         +R L
Sbjct: 216 ISDAGGGDATEPSWNPGADPADRNTVAYTLTTNPDPDV----DDGTELRATEGLGTDRPL 271

Query: 387 VEDSNLQ----APTWSPSGRSLIF 406
           +   + +    + +W P G+ ++F
Sbjct: 272 LAGGHAEWGTRSASWLPDGKDVVF 295


>gi|239944417|ref|ZP_04696354.1| hypothetical protein SrosN15_25687 [Streptomyces roseosporus NRRL
           15998]
          Length = 835

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 20/160 (12%)

Query: 298 TNTLFINISASYSPDSSQ----IVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ LF +  A Y  D S     +VF S R+  K Q+Y+  ++GS  +R++  ++A+   P
Sbjct: 75  TDPLFGDGPAHYDQDPSARGDVLVFTSLRDSAKPQVYIRGADGS-VRRLTDGRDAAR--P 131

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKD-------GSQERLLVEDS-NLQAPTWSPSGRSL 404
             SP G  + F   S E    G +++D       GS  R L + + N ++PTWSP G  +
Sbjct: 132 ELSPDGRTVVFD--SAEPGPGGTVQRDLWSVGVDGSNLRRLTDTADNEESPTWSPDGTRI 189

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQW 442
            ++   D   G ++Y  D+ G  +T I+      A++P W
Sbjct: 190 AYACDGDAVLGWQIYVRDVAGGPQTRISDAGGGDATEPSW 229



 Score = 45.1 bits (105), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 64/144 (44%), Gaps = 24/144 (16%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKR 340
           D++SV +  +   RLT+T     S ++SPD ++I +  D +     Q+YV    G  Q R
Sbjct: 156 DLWSVGVDGSNLRRLTDTADNEESPTWSPDGTRIAYACDGDAVLGWQIYVRDVAGGPQTR 215

Query: 341 ISQDKEASYFDPVWSPQGD-----LIAFTKFSGEKFAIGVMKKDGSQ---------ERLL 386
           IS        +P W+P  D      +A+T  +     +     DG++         +R L
Sbjct: 216 ISDAGGGDATEPSWNPGADPADRNTVAYTLTTNPDPDV----DDGTELRATEGLGTDRPL 271

Query: 387 VEDSNLQ----APTWSPSGRSLIF 406
           +   + +    + +W P G+ ++F
Sbjct: 272 LAGGHAEWGTRSASWLPDGKDVVF 295


>gi|83816446|ref|YP_446482.1| hypothetical protein SRU_2383 [Salinibacter ruber DSM 13855]
 gi|83757840|gb|ABC45953.1| hypothetical protein SRU_2383 [Salinibacter ruber DSM 13855]
          Length = 1065

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 6/116 (5%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDL 360
           FIN + ++SPD  +  F +  +G+ ++       G  + R + +   +  +  WSP G  
Sbjct: 385 FINSAGAWSPDGRRFAFITFADGRNEINTFNVQTGEIRTRTAVENVGAIHNLAWSPDGQS 444

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFS--RKKDG 412
           IAF+   G    + V   D    R L  D  + LQ PTWSP G +L F+  R +DG
Sbjct: 445 IAFSGLEGGLSDLYVYDLDQKNVRQLTNDRYAALQ-PTWSPDGETLAFTTDRGRDG 499



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 31/239 (12%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRF--- 265
           +Q+   P  SP+ + VA+ +  +     +++ D       + +   RS     A RF   
Sbjct: 329 NQLNISPAVSPDGRYVAFISRRNLFNTNLFVADAETGEIVQELEGTRSNPHFDALRFINS 388

Query: 266 ----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIV 317
               S +G+R       D   +I + ++Q+   E  T T   N+ A    ++SPD   I 
Sbjct: 389 AGAWSPDGRRFAFITFADGRNEINTFNVQTG--EIRTRTAVENVGAIHNLAWSPDGQSIA 446

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F     G   LYV   +  + ++++ D+ A+   P WSP G+ +AFT   G         
Sbjct: 447 FSGLEGGLSDLYVYDLDQKNVRQLTNDRYAA-LQPTWSPDGETLAFTTDRGRD-GTNFET 504

Query: 378 KDGSQERLLVED-------------SNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +  +ER+ + D             + +Q  P +SP GRS+ F   +DG      Y +D
Sbjct: 505 LEYGEERIGLIDVASGEIRTIRPFSTGMQHNPQFSPDGRSIYFVADQDGFKDVYRYDLD 563



 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 16/154 (10%)

Query: 303 INISASYSPDSSQIVFESDRE-GKEQLYVMQS-NGSDQKRISQDKEASYFDPV------- 353
           +NIS + SPD   + F S R      L+V  +  G   + +   +   +FD +       
Sbjct: 331 LNISPAVSPDGRYVAFISRRNLFNTNLFVADAETGEIVQELEGTRSNPHFDALRFINSAG 390

Query: 354 -WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRK 409
            WSP G   AF  F+  +  I        + R      N+ A     WSP G+S+ FS  
Sbjct: 391 AWSPDGRRFAFITFADGRNEINTFNVQTGEIRTRTAVENVGAIHNLAWSPDGQSIAFSGL 450

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQW 442
           + G   S LY  DL+ +N   +    YA+  P W
Sbjct: 451 EGGL--SDLYVYDLDQKNVRQLTNDRYAALQPTW 482



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 21/187 (11%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD------TRI 246
           L V D D  N+R LT  R   L +P +SP+ + +A+ T    D      ++        I
Sbjct: 457 LYVYDLDQKNVRQLTNDRYAAL-QPTWSPDGETLAFTTDRGRDGTNFETLEYGEERIGLI 515

Query: 247 DRAPKRIGNFR----SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--T 300
           D A   I   R     M   P+FS +G+       +D   D+Y  DL   AT R+T   T
Sbjct: 516 DVASGEIRTIRPFSTGMQHNPQFSPDGRSIYFVADQDGFKDVYRYDLDEEATYRVTELKT 575

Query: 301 LFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---YFDP 352
               I+A     S +  S +++F     G   +  +    +  +R++  +EAS      P
Sbjct: 576 GVSGITALSPALSVARRSGRMMFSVFSNGGYSIVGLSPEETKGERMTPKEEASNTAALLP 635

Query: 353 VWSPQGD 359
              P+GD
Sbjct: 636 PVQPKGD 642


>gi|294508417|ref|YP_003572475.1| conserved hypothetical protein, secreted [Salinibacter ruber M8]
 gi|294344745|emb|CBH25523.1| conserved hypothetical protein, secreted [Salinibacter ruber M8]
          Length = 1065

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 6/116 (5%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDL 360
           FIN + ++SPD  +  F +  +G+ ++       G  + R + +   +  +  WSP G  
Sbjct: 385 FINSAGAWSPDGRRFAFITFADGRNEINTFNVQTGEIRTRTAVENVGAIHNLAWSPDGQS 444

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFS--RKKDG 412
           IAF+   G    + V   D    R L  D  + LQ PTWSP G +L F+  R +DG
Sbjct: 445 IAFSGLEGGLSDLYVYDLDQKNVRQLTNDRYAALQ-PTWSPDGETLAFTTDRGRDG 499



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 99/238 (41%), Gaps = 29/238 (12%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRF--- 265
           +Q+   P  SP+ + VA+ +  +     +++ D       + +   RS     A RF   
Sbjct: 329 NQLNISPAVSPDGRYVAFISRRNLFNTNLFVADAETGEIVQELEGTRSNPHFDALRFINS 388

Query: 266 ----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIV 317
               S +G+R       D   +I + ++Q+   E  T T   N+ A    ++SPD   I 
Sbjct: 389 AGAWSPDGRRFAFITFADGRNEINTFNVQTG--EIRTRTAVENVGAIHNLAWSPDGQSIA 446

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----- 372
           F     G   LYV   +  + ++++ D+ A+   P WSP G+ +AFT   G         
Sbjct: 447 FSGLEGGLSDLYVYDLDQKNVRQLTNDRYAA-LQPTWSPDGETLAFTTDRGRDGTNFETL 505

Query: 373 ------IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                 IG++  +  + R +   S      P +SP GRS+ F   +DG      Y +D
Sbjct: 506 EYGEERIGLIDVESGEIRTIRPFSTGMQHNPQFSPDGRSIYFVADQDGFKDVYRYDLD 563



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 64/154 (41%), Gaps = 16/154 (10%)

Query: 303 INISASYSPDSSQIVFESDRE-GKEQLYVMQS-NGSDQKRISQDKEASYFDPV------- 353
           +NIS + SPD   + F S R      L+V  +  G   + +   +   +FD +       
Sbjct: 331 LNISPAVSPDGRYVAFISRRNLFNTNLFVADAETGEIVQELEGTRSNPHFDALRFINSAG 390

Query: 354 -WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRK 409
            WSP G   AF  F+  +  I        + R      N+ A     WSP G+S+ FS  
Sbjct: 391 AWSPDGRRFAFITFADGRNEINTFNVQTGEIRTRTAVENVGAIHNLAWSPDGQSIAFSGL 450

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQW 442
           + G   S LY  DL+ +N   +    YA+  P W
Sbjct: 451 EGGL--SDLYVYDLDQKNVRQLTNDRYAALQPTW 482



 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 21/187 (11%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---YDDEDILRVYLMDTRIDRA 249
           L V D D  N+R LT  R   L +P +SP+ + +A+ T    D  +   +   + RI   
Sbjct: 457 LYVYDLDQKNVRQLTNDRYAAL-QPTWSPDGETLAFTTDRGRDGTNFETLEYGEERIGLI 515

Query: 250 PKRIGNFRS-------MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--T 300
               G  R+       M   P+FS +G+       +D   D+Y  DL   AT R+T   T
Sbjct: 516 DVESGEIRTIRPFSTGMQHNPQFSPDGRSIYFVADQDGFKDVYRYDLDEEATYRVTELKT 575

Query: 301 LFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---YFDP 352
               I+A     S +  S +++F     G   +  +    +  +R++  +EAS      P
Sbjct: 576 GVSGITALSPALSVARRSGRMMFSVFSNGGYSIVGLSPEETKGERMTPKEEASNTAALLP 635

Query: 353 VWSPQGD 359
              P+GD
Sbjct: 636 PVQPKGD 642


>gi|294817300|ref|ZP_06775942.1| Amidohydrolase [Streptomyces clavuligerus ATCC 27064]
 gi|294322115|gb|EFG04250.1| Amidohydrolase [Streptomyces clavuligerus ATCC 27064]
          Length = 1047

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 26/206 (12%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G+   ++  +     I+ +    +   RLT   F +   S+SPD ++I F S+R
Sbjct: 112 PVISPDGREVAMAAYRGGFFSIWVMRTDGSRLRRLTGGPFDDRGPSWSPDGTRIAFSSER 171

Query: 323 EG---------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--K 365
            G               ++      +    Q+  +QD     FDPVWS  G  + F   +
Sbjct: 172 GGDPVAGSPYRIWTVNVRDGGLTRLTGLPGQQGPAQDGPWEDFDPVWSADGSRVLFVRGR 231

Query: 366 FSGEKF---AIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           F+        I  +  DG    ++ E    + NL  P  SP+GR+  + R   G    + 
Sbjct: 232 FTAPALVSRTIASVPADGGGGPVVTEHTATEGNLLTPAVSPAGRT-AWLRSVPGPARPET 290

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
            ++ ++G    L    A A  P+W+G
Sbjct: 291 ITLFVDGEPVALDGDLAPAP-PRWIG 315



 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 7/64 (10%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSR 408
           P  SP G  +AF   +    ++  ++  G   R +V  S    +Q P W+P GR+LI++ 
Sbjct: 375 PQLSPDGRTVAFAALN----SLWTVRASGGAPRRIVRSSPTAYIQGPVWTPDGRALIYTD 430

Query: 409 KKDG 412
            +DG
Sbjct: 431 DRDG 434


>gi|219847846|ref|YP_002462279.1| WD40 domain-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219542105|gb|ACL23843.1| WD40 domain protein beta Propeller [Chloroflexus aggregans DSM
           9485]
          Length = 629

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 93/206 (45%), Gaps = 35/206 (16%)

Query: 175 SRILFVSESV-------VSGIIKNSLCV---MDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           +R+L +SE V        S    NSL +   + RD     Y TP+         +SP+ +
Sbjct: 433 TRLLVISERVDRPDLMLWSIADTNSLTIPSRLTRDQPACHYETPA---------WSPDGR 483

Query: 225 KVAY--------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA------PRFSSNGK 270
           ++ +        A Y  E   R Y +   +      + N R +          R S +GK
Sbjct: 484 RIYWVSDCDGYFAIYSAEPSYRPYSLRNNLVGFIAELSNIRKLSNQNANDRFARVSPDGK 543

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +   +  +D   +IY ++   +   RLTN    + + ++SPD  Q+ F SDR+G  ++Y+
Sbjct: 544 QIAFASDRDGNWEIYVMNSDGSNVRRLTNNPATDDAPTWSPDGRQLAFASDRDGDFEIYI 603

Query: 331 MQ-SNGSDQKRISQDKEASYFDPVWS 355
           +  S+G+  ++++Q+     + P+W+
Sbjct: 604 LNVSDGTITQQVTQNTAQDRW-PLWT 628



 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 18/125 (14%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQ----------------SNGSDQKRISQDKEASY 349
           + ++SPD  +I + SD +G   +Y  +                +  S+ +++S       
Sbjct: 475 TPAWSPDGRRIYWVSDCDGYFAIYSAEPSYRPYSLRNNLVGFIAELSNIRKLSNQNANDR 534

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSR 408
           F  V SP G  IAF       + I VM  DGS  R L  + +   APTWSP GR L F+ 
Sbjct: 535 FARV-SPDGKQIAFASDRDGNWEIYVMNSDGSNVRRLTNNPATDDAPTWSPDGRQLAFAS 593

Query: 409 KKDGD 413
            +DGD
Sbjct: 594 DRDGD 598


>gi|291276672|ref|YP_003516444.1| putative protein tolB precursor [Helicobacter mustelae 12198]
 gi|290963866|emb|CBG39702.1| putative protein tolB precursor [Helicobacter mustelae 12198]
          Length = 418

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 80/363 (22%), Positives = 154/363 (42%), Gaps = 40/363 (11%)

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
           +   ++  V+  DLQ +  F L+ + S  ++  NPD     Q    L   +     V+KE
Sbjct: 45  DFAQEIYRVLLGDLQVTGHF-LVREGSKGRR--NPDYTEFIQQKTDLYINI----EVLKE 97

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
             + ++V  +L+DV  +  ++ K +     A +  +AH I+ D    I     D+  R +
Sbjct: 98  DAN-IKVILKLFDVNMQNLVLNKAYTLDDEALYPFVAHKIAIDANNYIKAPSIDWMKRYV 156

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-----PRFSPNQQKVAYATYDD 233
            +S +V  G  +N + + D       Y    R  IL +     P+++  +Q   Y T   
Sbjct: 157 VLSANV--GPRRNDILISD-------YTLTYRKVILNDGLNVFPKWANAEQTEIYYTKIT 207

Query: 234 ED--ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D  I+  Y + T I     R    R + +    S +GK+AL+++  +   DIY  D  +
Sbjct: 208 RDFPIIIKYNIYTGISSEILR---GRGLAIVSNVSKDGKKALMTLAPNGDPDIYLYDFDT 264

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASY 349
               ++T    I++S ++  + + ++F SDR G   ++   +Q N   ++ +   K  S 
Sbjct: 265 KQRIQMTKYRGIDVSGNFIDNDTAMIFVSDRLGYPNIFTKKLQENAPIEQVVFHGKNNSS 324

Query: 350 FDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                +   + + +T      +F    F + ++       R L  +   Q P +S  G S
Sbjct: 325 V----TAYNNYVVYTSRDTNNEFGQNTFNLYLISMKSDFIRRLTTNGVNQMPKFSADGGS 380

Query: 404 LIF 406
           ++F
Sbjct: 381 VMF 383


>gi|262194655|ref|YP_003265864.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262078002|gb|ACY13971.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1598

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 62/287 (21%), Positives = 125/287 (43%), Gaps = 19/287 (6%)

Query: 148  PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRY 205
            P + ++  H +  +I   +  E GD      F  +   VVS     S+ V + DG+    
Sbjct: 946  PGALQEAKHLLYSNIAPVVFTEHGDAVYSATFSPDGRRVVSASWDQSVRVWNADGSGQPL 1005

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            +    +  +    FSP+ +++A A+ D    +RV+  D      P  +      + + RF
Sbjct: 1006 VLRGHEDAVLSASFSPDGRRIASASKDKS--VRVWNADG--SGQPLLLRGHEEAVRSVRF 1061

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S +G R++IS   D  + +++ D          +   ++ SA +SPD  +IV  S+    
Sbjct: 1062 SPDG-RSIISASNDTTIRVWNADGSGRPLVLHGHEDAVH-SAHFSPDGRRIVSASN---D 1116

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            + + V  ++G+ +  + +  EA   +  +SP G  I    +     ++ +   DGS E  
Sbjct: 1117 KSVRVWNADGAGEPLVLRGHEAGVMEANFSPDGSRIVSASYDR---SVRIWPADGSGEAQ 1173

Query: 386  LV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            ++   +  + A  +SP G  ++       D  ++++  D +G + TL
Sbjct: 1174 VLRGHEGRVYAAGFSPDGAYVV---SASSDKSARVWRADGSGLHWTL 1217



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 65/270 (24%), Positives = 119/270 (44%), Gaps = 31/270 (11%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +VS    NS+ V + DG+    +    D+ +    FSP+ ++V  A+ D    +RV+  D
Sbjct: 1278 IVSASYDNSVRVWNADGSGEPVILRGHDKWVLWASFSPDGRRVISASLDKS--VRVWNAD 1335

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +    R       +    FS +G R ++S   D ++ +++ D  S     L   L  
Sbjct: 1336 GSGEALVLR--GHEDGVFTADFSPDGAR-IVSASNDHSVRVWNAD-GSGRPRVLRGHLAR 1391

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW----SPQGD 359
              SA +SPD ++IV  S     + + V +++GS +  + +  E    DPVW    SP G 
Sbjct: 1392 VHSAQFSPDGARIVSAS---VDKSVRVWRADGSGEPVVLRGHE----DPVWSARFSPDGQ 1444

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             I          ++ V + DG+ E +++   D  +    +SP GR ++ + K   D   +
Sbjct: 1445 RIVSAAMDK---SVRVWQADGTGEPVILRGHDDWVTWAEFSPDGRFIVSASK---DKTVR 1498

Query: 418  LYSIDLNGR------NETLINTPAYASDPQ 441
            ++  D  G+      +E  +N   ++ D Q
Sbjct: 1499 VWRADGTGQPLVLRGHEMWVNKVRFSPDGQ 1528



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 18/228 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            E +V+    +S+ V    G+         D  +    FSP+  ++  A+YD+   +RV+ 
Sbjct: 1234 EHIVTSSYDSSVRVWRARGSGQPLALRGHDDAVVAASFSPDGARIVSASYDNS--VRVWN 1291

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D   +  P  +      +L   FS +G+R +IS   D+++ +++ D    A     +  
Sbjct: 1292 ADGSGE--PVILRGHDKWVLWASFSPDGRR-VISASLDKSVRVWNADGSGEALVLRGHED 1348

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +  +A +SPD ++IV  S+      + V  ++GS + R+ +   A      +SP G  I
Sbjct: 1349 GV-FTADFSPDGARIVSASN---DHSVRVWNADGSGRPRVLRGHLARVHSAQFSPDGARI 1404

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRSLI 405
                      ++ V + DGS E +++     + P W    SP G+ ++
Sbjct: 1405 VSASVDK---SVRVWRADGSGEPVVLRGH--EDPVWSARFSPDGQRIV 1447



 Score = 38.9 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 14/224 (6%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +VS     S+ V + DGA    +    +  + E  FSP+  ++  A+YD    +R++  D
Sbjct: 1110 IVSASNDKSVRVWNADGAGEPLVLRGHEAGVMEANFSPDGSRIVSASYDRS--VRIWPAD 1167

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +    R       + A  FS +G   ++S   D++  ++  D  S     L      
Sbjct: 1168 GSGEAQVLR--GHEGRVYAAGFSPDGAY-VVSASSDKSARVWRAD-GSGLHWTLRGHDDG 1223

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +SAS+S D   IV  S       + V ++ GS Q    +  + +     +SP G  I  
Sbjct: 1224 VLSASFSADGEHIVTSS---YDSSVRVWRARGSGQPLALRGHDDAVVAASFSPDGARIVS 1280

Query: 364  TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
              +     ++ V   DGS E +++   D  +   ++SP GR +I
Sbjct: 1281 ASYDN---SVRVWNADGSGEPVILRGHDKWVLWASFSPDGRRVI 1321



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 62/138 (44%), Gaps = 6/138 (4%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +VS  +  S+ V   DG+    +    +  ++  RFSP+ Q++  A  D    +RV+  D
Sbjct: 1404 IVSASVDKSVRVWRADGSGEPVVLRGHEDPVWSARFSPDGQRIVSAAMDKS--VRVWQAD 1461

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +  P  +      +    FS +G R ++S  KD+ + ++  D          + +++
Sbjct: 1462 GTGE--PVILRGHDDWVTWAEFSPDG-RFIVSASKDKTVRVWRADGTGQPLVLRGHEMWV 1518

Query: 304  NISASYSPDSSQIVFESD 321
            N    +SPD  ++V  SD
Sbjct: 1519 N-KVRFSPDGQRLVSASD 1535


>gi|297809975|ref|XP_002872871.1| hypothetical protein ARALYDRAFT_490390 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318708|gb|EFH49130.1| hypothetical protein ARALYDRAFT_490390 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 652

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 15/96 (15%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVM-----QSNGSDQKRISQDKEASYFD--PVWSP 356
           N   S SPD   IVF S R G + LY++     +SNG   +R++   E  + D  P WSP
Sbjct: 447 NAFPSCSPDGKSIVFRSGRSGHKNLYIVDAVNGESNGGGIRRLT---EGPWIDTMPCWSP 503

Query: 357 QGDLIAFTKFSG-----EKFAIGVMKKDGSQERLLV 387
           +GDLI F+         + F   V++ DGS  R ++
Sbjct: 504 KGDLIGFSSNRHNPANIDAFGAYVVRPDGSGLRRIL 539



 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 29/56 (51%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           P  SP GDLIA          I V K DGS+   L++D      +WSP+ R +I++
Sbjct: 345 PSSSPNGDLIALNSDFDINGGIKVAKSDGSKRWTLIKDRTAFYNSWSPTERHVIYT 400


>gi|153808186|ref|ZP_01960854.1| hypothetical protein BACCAC_02472 [Bacteroides caccae ATCC 43185]
 gi|149129089|gb|EDM20305.1| hypothetical protein BACCAC_02472 [Bacteroides caccae ATCC 43185]
          Length = 1095

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 23/151 (15%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
           A  SP+ ++IVF      K  +Y + + G    +++   +ASY  +PVWSP G  IAF  
Sbjct: 28  ARISPNGTEIVFCY----KGDIYKVPAQGGTAVQLTT--QASYEANPVWSPDGKQIAFAS 81

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDL- 423
                F + +M  DG   + L   S  + P+ ++P G+ ++FS       GS L+     
Sbjct: 82  DRNGNFDLFIMPADGGTAQRLTYHSASEIPSAFTPDGKFVLFSASIQDPAGSALFPTGAM 141

Query: 424 ---------NGRNETLINTPAYASDPQWVGF 445
                     GR E ++ TPA     +WV F
Sbjct: 142 TELYKVPAGGGRTEQVLATPA-----EWVCF 167



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 5/101 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R S NG   +   + D    IY V  Q     +LT       +  +SPD  QI F SDR 
Sbjct: 29  RISPNGTEIVFCYKGD----IYKVPAQGGTAVQLTTQASYEANPVWSPDGKQIAFASDRN 84

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           G   L++M ++G   +R++    AS     ++P G  + F+
Sbjct: 85  GNFDLFIMPADGGTAQRLTY-HSASEIPSAFTPDGKFVLFS 124



 Score = 37.0 bits (84), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 36/126 (28%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D++        T+++TNT     + S++PD+  +V+ S+R G  QLY          +I+
Sbjct: 342 DVFVTSTDYTTTKQITNTPGKEAAVSFAPDNRTLVYASERTGNWQLYTA--------KIA 393

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPS 400
           + +EA++      P   LI                    +E +L+    ++   P +SP 
Sbjct: 394 RKEEANF------PNATLI--------------------EEEVLLPSKTVERAYPQYSPD 427

Query: 401 GRSLIF 406
           G+ L F
Sbjct: 428 GKELAF 433


>gi|86153862|ref|ZP_01072065.1| protein TolB [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85842823|gb|EAQ60035.1| protein TolB [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 333

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 91/196 (46%), Gaps = 12/196 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P++   +Q + Y T  D D   +Y  D   ++A K + +   M++A   S +G + L+++
Sbjct: 109 PKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKILSS-GGMVVASDVSVDGSKLLVTM 167

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYV--MQS 333
              +  D+Y  DL +    +LTN   I+++ ++   D S++VF SDR G   +++  + S
Sbjct: 168 APKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNS 227

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDS 390
           N ++Q        ++      S   D + ++     +   F I +M  +    R L  + 
Sbjct: 228 NSAEQVVFHGRNNSAV-----STYKDFLVYSSREPNQAGVFNIYLMSINSDYIRQLTANG 282

Query: 391 NLQAPTWSPSGRSLIF 406
               P +S  G S++F
Sbjct: 283 KNLFPRFSSDGGSIVF 298


>gi|291447884|ref|ZP_06587274.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291350831|gb|EFE77735.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 839

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 20/160 (12%)

Query: 298 TNTLFINISASYSPDSSQ----IVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ LF +  A Y  D S     +VF S R+  K Q+Y+  ++GS  +R++  ++A+   P
Sbjct: 79  TDPLFGDGPAHYDQDPSARGDVLVFTSLRDSAKPQVYIRGADGS-VRRLTDGRDAAR--P 135

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKD-------GSQERLLVEDS-NLQAPTWSPSGRSL 404
             SP G  + F   S E    G +++D       GS  R L + + N ++PTWSP G  +
Sbjct: 136 ELSPDGRTVVFD--SAEPGPGGTVQRDLWSVGVDGSNLRRLTDTADNEESPTWSPDGTRI 193

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQW 442
            ++   D   G ++Y  D+ G  +T I+      A++P W
Sbjct: 194 AYACDGDAVLGWQIYVRDVAGGPQTRISDAGGGDATEPSW 233



 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKR 340
           D++SV +  +   RLT+T     S ++SPD ++I +  D +     Q+YV    G  Q R
Sbjct: 160 DLWSVGVDGSNLRRLTDTADNEESPTWSPDGTRIAYACDGDAVLGWQIYVRDVAGGPQTR 219

Query: 341 ISQDKEASYFDPVWSPQGD 359
           IS        +P W+P  D
Sbjct: 220 ISDAGGGDATEPSWNPGAD 238


>gi|332662868|ref|YP_004445656.1| amidohydrolase [Haliscomenobacter hydrossis DSM 1100]
 gi|332331682|gb|AEE48783.1| amidohydrolase [Haliscomenobacter hydrossis DSM 1100]
          Length = 1078

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 9/134 (6%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++  Q      L       +   YSPD  +I+F SD  G +  +VM  +G + ++I+
Sbjct: 59  DIYAISAQGGEARLLRGGHAFEVQPKYSPDGQKILFTSDAGGGDNAWVMDRDGKNARQIT 118

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVED-SNLQ 393
           ++      + +W+P G+ I   K         +GE +   +    G Q      D  +L 
Sbjct: 119 KEDFRLVNNSIWTPDGEYIITRKHFTSQRSLGAGELWMYHLSGGKGIQLTSRKNDQQDLN 178

Query: 394 APTWSPSGRSLIFS 407
            P  SP GR + +S
Sbjct: 179 EPNISPDGRYVYYS 192



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 14/167 (8%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-IYSVDLQSNATERLTNTLFINISAS 308
           P+R+         P FS +GK  L     D A   +  + L + A   ++       + +
Sbjct: 383 PQRLTKSTDFEFEPTFSPDGKSLLYVTHNDSASGTLRRIQLDNTAASPVSTEPANYRTPA 442

Query: 309 YSPDSSQIVFESD---------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           YSPD   IVF+ D            K  +Y+++ +G     I+    A   +P ++ +GD
Sbjct: 443 YSPDGQLIVFKKDGSSAAMGPANTAKPGIYLLKVSGGPATFIT----AQGNNPRFNAKGD 498

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            I +T   G   ++G  K DG+ ER+ +  +     T SP  + + F
Sbjct: 499 RIYYTLGGGMNMSMGSCKLDGTDERIHLRSTYGSQFTVSPDEKWVAF 545



 Score = 40.8 bits (94), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 23/181 (12%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRIS 342
           ++  DL +   +RLT +       ++SPD   +++ +  +     L  +Q + +    +S
Sbjct: 373 LWKKDLPNGTPQRLTKSTDFEFEPTFSPDGKSLLYVTHNDSASGTLRRIQLDNTAASPVS 432

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG----------VMKKDGSQERLLVEDSNL 392
            +  A+Y  P +SP G LI F K  G   A+G          ++K  G     +    N 
Sbjct: 433 TEP-ANYRTPAYSPDGQLIVFKK-DGSSAAMGPANTAKPGIYLLKVSGGPATFITAQGN- 489

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS------DPQWVGFM 446
             P ++  G  + ++    G     + S  L+G +E +     Y S      D +WV F+
Sbjct: 490 -NPRFNAKGDRIYYTL--GGGMNMSMGSCKLDGTDERIHLRSTYGSQFTVSPDEKWVAFV 546

Query: 447 D 447
           D
Sbjct: 547 D 547


>gi|322379221|ref|ZP_08053612.1| translocation protein TolB [Helicobacter suis HS1]
 gi|322379706|ref|ZP_08054019.1| translocation protein TolB [Helicobacter suis HS5]
 gi|321147855|gb|EFX42442.1| translocation protein TolB [Helicobacter suis HS5]
 gi|321148361|gb|EFX42870.1| translocation protein TolB [Helicobacter suis HS1]
          Length = 413

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 79/372 (21%), Positives = 160/372 (43%), Gaps = 32/372 (8%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           K++ +++ DL+ S  F ++     + +  + DS+       + G Q+LV    IK  ++ 
Sbjct: 46  KIARLLASDLKISGHFEVMGAPQIQTQTPSYDSLA------TKGIQILVE---IKADQNH 96

Query: 124 LRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            ++   L+D+ +R     K + F++ A +  IAH ++ D    I      +  R++  ++
Sbjct: 97  -QIHATLYDIANRSIKASKDYEFNTKALYPFIAHRVAIDTNALIQAPSIAWMQRMVVFAK 155

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +  G+   S+ V D   +  + +  +    +F    + +Q  + +  Y  E  +  Y  
Sbjct: 156 YLSPGV--TSIVVADYTLSYQQEIIKNNLLNIFPKWANADQSAIYFTQYLREPTIIKY-- 211

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D R  ++ + I     M      S NG + L+S+  D   DI+  D    + +RLT    
Sbjct: 212 DIRTGKS-EAITQSSGMAAVSSVSKNGDKLLLSLAPDGQTDIFFYDTLKKSLKRLTTYSG 270

Query: 303 INISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           I++  ++  +   +VF SDR G   +Y+  ++ N   ++ +   K     +   +  GD 
Sbjct: 271 IDVMGTFVDNEKAMVFVSDRSGYPNIYLKKLRENAPVEQVVFYAKN----NDSITASGDN 326

Query: 361 IAFTKFSGEKFAIG--------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           I +     +K A G        +  K     RL V   N Q P +S  G++++F +K   
Sbjct: 327 IVYVS-REDKDANGQSTFNLHLITLKSDYVRRLTVSGVN-QMPRFSYDGKAVMFLKKAAS 384

Query: 413 DTGSKLYSIDLN 424
            +   +  +D N
Sbjct: 385 QSALGVILLDSN 396


>gi|262198787|ref|YP_003269996.1| hypothetical protein Hoch_5623 [Haliangium ochraceum DSM 14365]
 gi|262082134|gb|ACY18103.1| WD40 domain protein beta Propeller [Haliangium ochraceum DSM 14365]
          Length = 956

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 65/121 (53%), Gaps = 2/121 (1%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           DQ+   P +SP+ Q++A++ ++      +++ D   +RA  R+   R++ ++P FS +G 
Sbjct: 435 DQVA-TPAWSPDGQRIAFSAWESGGYRDIWIFDVASERA-TRLTRDRALDVSPVFSPDGA 492

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
               +  +    +IY+ +  + A  ++TN +   ++A  SPD +++V++    G   LY 
Sbjct: 493 YLFYASDRSGIFNIYAHEWATGALYQVTNVIGGAMAAEISPDGTRLVYQGFGVGGYDLYE 552

Query: 331 M 331
           +
Sbjct: 553 L 553



 Score = 44.3 bits (103), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 59/136 (43%), Gaps = 8/136 (5%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY  D++  A + +T+ L     A  SPD   + F    E + +L +M      + R+ 
Sbjct: 369 DIYRWDVRETAPQPITHGLRARQPAV-SPDERTVAFVLSGESRSRLALMPLEPYAEHRVV 427

Query: 343 QDKEASYFD----PVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQ-APT 396
              E   FD    P WSP G  IAF+ + SG    I +      +   L  D  L  +P 
Sbjct: 428 WSGEHR-FDQVATPAWSPDGQRIAFSAWESGGYRDIWIFDVASERATRLTRDRALDVSPV 486

Query: 397 WSPSGRSLIFSRKKDG 412
           +SP G  L ++  + G
Sbjct: 487 FSPDGAYLFYASDRSG 502



 Score = 43.5 bits (101), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 7/122 (5%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFR-SMILAPRFSSNGKR 271
           +P  SP+++ VA+     E   R+ LM      A  R+   G  R   +  P +S +G+R
Sbjct: 391 QPAVSPDERTVAFVL-SGESRSRLALMPLE-PYAEHRVVWSGEHRFDQVATPAWSPDGQR 448

Query: 272 ALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
              S  +     DI+  D+ S    RLT    +++S  +SPD + + + SDR G   +Y 
Sbjct: 449 IAFSAWESGGYRDIWIFDVASERATRLTRDRALDVSPVFSPDGAYLFYASDRSGIFNIYA 508

Query: 331 MQ 332
            +
Sbjct: 509 HE 510


>gi|225437689|ref|XP_002279803.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 677

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFD--PVWSPQGDL 360
           N   S SPD   +VF S R G + LY++ + NG  +  I Q  E  + D  P WSP G L
Sbjct: 473 NAFPSCSPDGKSVVFRSGRSGNKNLYIIDAVNGELEGGIRQLTEGPWIDTMPSWSPDGKL 532

Query: 361 IAFTKFSGEK-----FAIGVMKKDGSQER 384
           IAF+           F+I V++ DGS  R
Sbjct: 533 IAFSSNRHNPDNLNAFSIYVIRPDGSDLR 561



 Score = 43.1 bits (100), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 12/172 (6%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA----MDIYSVDLQS--NATERLTN 299
           I  AP+RI   R     P      KR  ++ ++  +    ++I+ +D +     TE L N
Sbjct: 257 ISEAPRRITPPRVHCFTPAAMQGSKRIAVATRRKGSNFRHIEIFDIDSKKFYPVTESL-N 315

Query: 300 TLFINISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             F + +   SP+   + +   R     G+  +  +    S    +   +    F P +S
Sbjct: 316 PNFHHYNPFVSPECGFLGYHRFRGESSPGESTIPHLDPVVSPINELRMLRLNGSF-PSFS 374

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           P GDLIAF      K  + ++K DGS+   +++D      +WSP+ + +I++
Sbjct: 375 PAGDLIAFNHDFEAKGGLKIVKSDGSKRWTVLKDRTAFYNSWSPTEKHVIYT 426



 Score = 41.6 bits (96), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 30/160 (18%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-- 365
           S+SP    I F  D E K  L +++S+GS +  + +D+ A Y    WSP    + +T   
Sbjct: 372 SFSPAGDLIAFNHDFEAKGGLKIVKSDGSKRWTVLKDRTAFYNS--WSPTEKHVIYTSVG 429

Query: 366 --FSGEKFAIGVMK-------KDGSQERLLV--------EDSNLQAPTWSPSGRSLIFSR 408
             F   K  + + +        D  +E +          E  N   P+ SP G+S++F  
Sbjct: 430 PIFESVKATVQIARISFDPSYLDDDREDIPADVKILTREETGNNAFPSCSPDGKSVVF-- 487

Query: 409 KKDGDTGSK-LYSID-----LNGRNETLINTPAYASDPQW 442
            + G +G+K LY ID     L G    L   P   + P W
Sbjct: 488 -RSGRSGNKNLYIIDAVNGELEGGIRQLTEGPWIDTMPSW 526


>gi|212704938|ref|ZP_03313066.1| hypothetical protein DESPIG_03005 [Desulfovibrio piger ATCC 29098]
 gi|212671602|gb|EEB32085.1| hypothetical protein DESPIG_03005 [Desulfovibrio piger ATCC 29098]
          Length = 437

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 76/392 (19%), Positives = 171/392 (43%), Gaps = 20/392 (5%)

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPR---FQDWNSLGAQVLVTGR 115
           + +G K+ ++V ++L       L    S    I  P   P    F+ +   G+ ++VT  
Sbjct: 52  NGMGAKLQKLVEENLSFLPFMRLTPAASVLGGILLPGYEPPNLDFKRFQLAGSDIVVTTY 111

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFN 174
                     V+ R ++     ++ GK++    A    ++A     D+ + +TG    F 
Sbjct: 112 WPNGDSGTSSVQIRAFETNTGGRLFGKEYPQVRAGDLPEVADRFCADLLEVLTGSGAFFR 171

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S + FV +S   G +  ++ ++   G ++R +T  + + +  P +SP+ + + + T+ DE
Sbjct: 172 STLAFVKKS---GRLSANVWLVKPTGRDLRQITNIKGEAM-SPAWSPDGRFIVF-THIDE 226

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               + + D R   + +R+    ++++ P F+ + K A +++       I+ ++      
Sbjct: 227 KSHSLGVWD-RKKGSVQRVRFPGNVVIGPSFTPDNKVA-VALSNGRYPVIFLLNHGFQKE 284

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPV 353
             L     IN+S ++    +++VF S R G  Q+++   +     R+S  K   Y  +  
Sbjct: 285 RILEGGNSINVSPTFDRTGTKMVFTSSRLGGPQIFMKDLSSGSITRVS--KNGGYNTEAN 342

Query: 354 WSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            SP G L+ +++ +  G +  +  M   G + ++     + + P++      + F+  + 
Sbjct: 343 LSPDGTLVTYSRMTEYGHRIFVQDMVT-GLERQITFGPGSDEQPSFCGDSYFIAFASSRG 401

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASD-PQW 442
           G  G  +Y    +G +   + T   A+  P+W
Sbjct: 402 GSRG--IYLTTRHGGDAKKVPTGGGAASFPRW 431


>gi|147767869|emb|CAN71280.1| hypothetical protein VITISV_027089 [Vitis vinifera]
          Length = 677

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 8/89 (8%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFD--PVWSPQGDL 360
           N   S SPD   +VF S R G + LY++ + NG  +  I Q  E  + D  P WSP G L
Sbjct: 473 NAFPSCSPDGKSVVFRSGRSGNKNLYIIDAVNGELEGGIRQLTEGXWIDTMPSWSPDGKL 532

Query: 361 IAFTKFSGEK-----FAIGVMKKDGSQER 384
           IAF+           F+I V++ DGS  R
Sbjct: 533 IAFSSNRHNPDNLNAFSIYVIRPDGSDLR 561



 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 12/172 (6%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA----MDIYSVDLQS--NATERLTN 299
           I  AP+RI   R     P      KR  ++ ++  +    ++I+ +D +     TE L N
Sbjct: 257 ISEAPRRITPPRVHCFTPAAMQGSKRIAVATRRKGSNFRHIEIFDIDSKKFYPVTESL-N 315

Query: 300 TLFINISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             F + +   SP+   + +   R     G+  +  +    S    +   +    F P +S
Sbjct: 316 PNFHHYNPFVSPECGFLGYHRFRGESSPGESTIPHLDPVXSPINELRMLRLNGSF-PXFS 374

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           P GDLIAF      K  + ++K DGS+   +++D      +WSP+ + +I++
Sbjct: 375 PAGDLIAFNHDFEAKGGLKIVKSDGSKRWTVLKDRTAFYNSWSPTEKHVIYT 426



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 26/144 (18%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--- 365
           +SP    I F  D E K  L +++S+GS +  + +D+ A Y    WSP    + +T    
Sbjct: 373 FSPAGDLIAFNHDFEAKGGLKIVKSDGSKRWTVLKDRTAFYNS--WSPTEKHVIYTSXGP 430

Query: 366 -FSGEKFAIGVMK-------KDGSQERLLV--------EDSNLQAPTWSPSGRSLIFSRK 409
            F   K  + + +        D  +E +          E  N   P+ SP G+S++F   
Sbjct: 431 IFESVKATVQIARISFDPSYLDDDREDIPADVKILTREETGNNAFPSCSPDGKSVVF--- 487

Query: 410 KDGDTGSK-LYSID-LNGRNETLI 431
           + G +G+K LY ID +NG  E  I
Sbjct: 488 RSGRSGNKNLYIIDAVNGELEGGI 511


>gi|260173764|ref|ZP_05760176.1| putative peptidase/protease family protein [Bacteroides sp. D2]
 gi|315922028|ref|ZP_07918268.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695903|gb|EFS32738.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 1083

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 67/142 (47%), Gaps = 20/142 (14%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
           A  SPD ++IVF      K  +Y + + G    +++   +ASY  +PVWSP G  IAF  
Sbjct: 28  ARISPDGTEIVFCY----KGDIYKVPAQGGTAVQLTT--QASYEANPVWSPDGKQIAFAS 81

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLY----- 419
                F + +M  DG   R L   S  + P+ ++P G+ ++FS        S L+     
Sbjct: 82  DRNGNFDLFIMPADGGVARRLTYHSASEIPSAFTPDGKYVLFSASIQDPANSALFPTGAM 141

Query: 420 ------SIDLNGRNETLINTPA 435
                 S+D  GR E ++ TPA
Sbjct: 142 TELYKVSVD-GGRTEQVLATPA 162



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  Q     +LT       +  +SPD  QI F SDR G   L++M ++G   +R++
Sbjct: 44  DIYKVPAQGGTAVQLTTQASYEANPVWSPDGKQIAFASDRNGNFDLFIMPADGGVARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++P G  + F+
Sbjct: 104 Y-HSASEIPSAFTPDGKYVLFS 124



 Score = 36.6 bits (83), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 20/122 (16%)

Query: 260 ILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           + A +FS     A +S    +       D++        T+++TNT     S S++PD+ 
Sbjct: 308 VAALKFSQGATSASVSPDGKQVAFIVRGDVFVTSTDYATTKQITNTPAKEASVSFAPDNR 367

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRI-------------SQDKEASYFDPVWSPQGDLI 361
            +V+ S+R G  QLY  + +  +                 S+  E +Y  P +SP G  +
Sbjct: 368 TLVYASERTGNWQLYTAKISRKEDPNFPNATLIEEEVLLPSKTVERAY--PQYSPDGKEL 425

Query: 362 AF 363
           AF
Sbjct: 426 AF 427


>gi|51892094|ref|YP_074785.1| acylaminoacyl-peptidase [Symbiobacterium thermophilum IAM 14863]
 gi|51855783|dbj|BAD39941.1| acylaminoacyl-peptidase [Symbiobacterium thermophilum IAM 14863]
          Length = 739

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           + S  +SPD   + F SDR G  Q++++  +G + ++++Q +  +  DPVWSP G  IAF
Sbjct: 84  DTSPRWSPDGRTLAFVSDRGGDRQIWLIDRHGGEARQLTQMRHGA-GDPVWSPDGRYIAF 142

Query: 364 TKFSGEK 370
           T   G +
Sbjct: 143 TSAVGPE 149



 Score = 41.2 bits (95), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 9/114 (7%)

Query: 302 FINIS-ASYSPDSSQIVF------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           F+ +S    SPD   + F         +E + ++++  + G +    +Q  +     P W
Sbjct: 31  FVTVSDPQISPDGEVVAFVRTHIDPESKEPRSRIWMAPAAGGEPVPFTQGPKNDT-SPRW 89

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFS 407
           SP G  +AF    G    I ++ + G + R L +  +    P WSP GR + F+
Sbjct: 90  SPDGRTLAFVSDRGGDRQIWLIDRHGGEARQLTQMRHGAGDPVWSPDGRYIAFT 143


>gi|320107458|ref|YP_004183048.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319925979|gb|ADV83054.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
          Length = 679

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 18/208 (8%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMD---- 243
           NSL V+  DGA   +LT   D+   + R+SP+   + Y +   E     L V  +D    
Sbjct: 170 NSLLVVSADGATTSFLTGPHDEA-GDGRWSPDGSSIVYVSRKKEYFSGRLNVLKLDAHSG 228

Query: 244 ------TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                 T +  AP   G   S I    +S +GK     +Q      IY +       +++
Sbjct: 229 LPAGEPTVLYTAPVDRGGGWS-IRGAIWSPDGKTLATVLQNSGWNHIYLIPAAGGQPKQI 287

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQ-DKEASYFDPVW 354
           T+  F +   +YSPD   + F S+R   E   L+ + +NG D +++ + D       P W
Sbjct: 288 TDGKFEDEDPAYSPDGKSLAFLSNRGLLEATNLWTIPANGGDAQQVVKFDVPGISSQPQW 347

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           SP    I F   S ++ +  ++++ GSQ
Sbjct: 348 SPDSSSIYFHHQSPQETSDLLVQQIGSQ 375



 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 78/193 (40%), Gaps = 33/193 (17%)

Query: 284 IYSVDLQSNATERLTNTLF--------INISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           I+ V     +  RLTN+           + S  +SPD+  I+F+S R G   L V+ ++G
Sbjct: 120 IWVVSTSGGSPRRLTNSPAGGGDPRQAADRSPRWSPDAHWILFQSGRRGINSLLVVSADG 179

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNL- 392
           +    ++   + +  D  WSP G  I +     E F+  + V+K D        E + L 
Sbjct: 180 ATTSFLTGPHDEA-GDGRWSPDGSSIVYVSRKKEYFSGRLNVLKLDAHSGLPAGEPTVLY 238

Query: 393 QAPT------------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------T 433
            AP             WSP G++L    +  G   + +Y I   G     I         
Sbjct: 239 TAPVDRGGGWSIRGAIWSPDGKTLATVLQNSG--WNHIYLIPAAGGQPKQITDGKFEDED 296

Query: 434 PAYASDPQWVGFM 446
           PAY+ D + + F+
Sbjct: 297 PAYSPDGKSLAFL 309



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 55/252 (21%), Positives = 102/252 (40%), Gaps = 37/252 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDT------RIDRAPKRIGNFRSMI-LAPRFSSNGKR 271
           +SP+ +++A+A+        ++++ T      R+  +P   G+ R     +PR+S +   
Sbjct: 105 WSPDSKQIAFASQGS-----IWVVSTSGGSPRRLTNSPAGGGDPRQAADRSPRWSPDAHW 159

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLY 329
            L    +     +  V      T  LT          +SPD S IV+ S ++     +L 
Sbjct: 160 ILFQSGRRGINSLLVVSADGATTSFLTGPHDEAGDGRWSPDGSSIVYVSRKKEYFSGRLN 219

Query: 330 VMQSNGSDQKRISQDKEASYFDPV------------WSPQGDLIAFTKFSGEKFAIGVMK 377
           V++ + +     + +    Y  PV            WSP G  +A    +     I ++ 
Sbjct: 220 VLKLD-AHSGLPAGEPTVLYTAPVDRGGGWSIRGAIWSPDGKTLATVLQNSGWNHIYLIP 278

Query: 378 KDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-- 431
             G Q + +     ED +   P +SP G+SL F   +     + L++I  NG +   +  
Sbjct: 279 AAGGQPKQITDGKFEDED---PAYSPDGKSLAFLSNRGLLEATNLWTIPANGGDAQQVVK 335

Query: 432 -NTPAYASDPQW 442
            + P  +S PQW
Sbjct: 336 FDVPGISSQPQW 347


>gi|296273864|ref|YP_003656495.1| TolB domain-containing protein [Arcobacter nitrofigilis DSM 7299]
 gi|296098038|gb|ADG93988.1| TolB domain protein [Arcobacter nitrofigilis DSM 7299]
          Length = 422

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 16/199 (8%)

Query: 217 PRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           P+++ ++Q   Y T        +++  L   ++D   K  G    MI+    + +G + L
Sbjct: 196 PKWANDKQDSFYYTSYRGSSPQLIKYNLYTRKVDYIMKSQG----MIVCSDVNKDGSKLL 251

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           I+   +   DIY  D ++   ERLTN   I++ A ++ + ++IVF SDR     ++  + 
Sbjct: 252 ITASPEGQPDIYLYDTKNKRKERLTNYKGIDVGAHFAENDTKIVFVSDRLNHPNIFSKKI 311

Query: 334 NGSDQKRI----SQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           NG   +R+      +  A+ FD   V+S +     FT  +   + I +  K     RL  
Sbjct: 312 NGRGVERLVYHGKNNSSATTFDSYVVYSSRETQNEFTDNTFNLYLISL--KSDFIRRLTT 369

Query: 388 EDSNLQAPTWSPSGRSLIF 406
              N Q P +S  G S++F
Sbjct: 370 NGVN-QFPKFSNDGESVLF 387


>gi|162454268|ref|YP_001616635.1| protein kinase [Sorangium cellulosum 'So ce 56']
 gi|161164850|emb|CAN96155.1| Protein kinase [Sorangium cellulosum 'So ce 56']
          Length = 1515

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 27/240 (11%)

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            L    FSP+ +++    +D     +V+L +      P  +   ++++    +S +G R +
Sbjct: 1101 LLSTTFSPDGRRILATDWDK----KVWLWNADGTGDPVVLHGHQNVVFVAAWSPDG-RHI 1155

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             S   D    ++S DLQS +   + +      +A++SPD  +IV  S+      + V  +
Sbjct: 1156 ASGSWDGTARVWSADLQS-SPPVIGDHEAAVAAAAWSPDGRRIVTASE---DRTVRVRNA 1211

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----ED 389
            +G+    I +  E   F   WSP G  I  T    E + + V   DG+   L++    E 
Sbjct: 1212 DGTGTPLILRGHEGRIFSATWSPDGKHIVTTS---EDYTVRVWSADGTGTPLILRGHHER 1268

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR------NETLINTPAYASDPQWV 443
             N  A  WSP GR ++       D  +++++ D  G       +E L+   +++ D + V
Sbjct: 1269 VNFAA--WSPDGRRIV---SASDDLTARIWNADGTGEPLVLRGHELLVKYASWSPDSRRV 1323


>gi|86739661|ref|YP_480061.1| serine/threonine protein kinase [Frankia sp. CcI3]
 gi|86566523|gb|ABD10332.1| serine/threonine protein kinase [Frankia sp. CcI3]
          Length = 734

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 81/193 (41%), Gaps = 15/193 (7%)

Query: 263 PRFSSNGKRALISVQKDEA----MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           P  S +G   +I    D+       +Y V L  ++  RL N        ++SPD  +I +
Sbjct: 541 PSLSPDGGFLVIRSTTDQTGTLNPGLYVVKLDGSSVRRL-NAKPQATDPAWSPDGERIAY 599

Query: 319 ESDREGKEQLYVM---QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            S+  G  + +++       +    I+QD+     DPVWSP    IAFT+       I  
Sbjct: 600 WSNSTGGNRGFIVVIPTQPDAQPTPITQDQGNGDSDPVWSPDSRKIAFTRAKNGDLEIFE 659

Query: 376 MKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFS--RKKDGDTGSKLYSI---DLNGRNET 429
           M  DG+  R L     + Q P ++P GR + FS  R        +LY +   DLN  +  
Sbjct: 660 MNSDGTDARQLTRVRGDDQDPAYAPDGR-IAFSGQRNPTNPDDRQLYVLNPDDLNDGDRK 718

Query: 430 LINTPAYASDPQW 442
           L  T  +    +W
Sbjct: 719 LTTTGGFNGHARW 731


>gi|213027106|ref|ZP_03341553.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 170

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 43/168 (25%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y M  N
Sbjct: 1   ALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQVYKMNIN 60

Query: 335 GSDQKRI----SQDKEA------------------------------------SYFD--P 352
           G   +RI    SQ+++A                                    ++ D  P
Sbjct: 61  GGAAQRITWEGSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSSTFLDETP 120

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
             +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 121 SLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 168


>gi|302327237|gb|ADL26438.1| conserved domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 418

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 65/128 (50%), Gaps = 21/128 (16%)

Query: 316 IVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           IV+ + R      +++M ++G++ + +++     +F P  +P G  + F +  G      
Sbjct: 67  IVWATSRANPHHDIWIMNADGTNARALTKSNNVDWF-PRIAPDGSKVLFNRSKGGWVPEN 125

Query: 369 -----EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                EK+ +  +  DG+ E  +VE++     TW P G+S++FSR        K++++DL
Sbjct: 126 DANYPEKWDLWTVGIDGTNETKIVENATWG--TWRPDGKSIVFSR------AGKVFTMDL 177

Query: 424 NGRNETLI 431
             + ETL+
Sbjct: 178 ASKKETLV 185


>gi|218960530|ref|YP_001740305.1| putative Tricorn protease homolog [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729187|emb|CAO80098.1| putative Tricorn protease homolog [Candidatus Cloacamonas
           acidaminovorans]
          Length = 1066

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 69/182 (37%), Gaps = 33/182 (18%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+++ +L+     RLT  L +     +SPD  QI F S  EG  ++Y+M S G + KR++
Sbjct: 22  DLWTFNLKDKVARRLTANLGMIRYPQFSPDGKQIAFTSTEEGTSEIYIMPSEGGEAKRLT 81

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSG 401
                 Y               ++ G K           Q   L E DS   +P   P G
Sbjct: 82  YLGAYPY-------------TLRWKGSKIIFASQHSSPLQHYNLYEIDSEGGSPVELPYG 128

Query: 402 RSLIFS-------------------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           R+   S                   R + G  G  L   + +G+ + LI+     + P W
Sbjct: 129 RATHISFGEKGVVLGRNTGNPARWKRYRGGTAGYLLVDKNGDGKFKKLIDLKGNFAHPMW 188

Query: 443 VG 444
           +G
Sbjct: 189 IG 190


>gi|326446361|ref|ZP_08221095.1| hypothetical protein SclaA2_35082 [Streptomyces clavuligerus ATCC
           27064]
          Length = 1100

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 26/206 (12%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G+   ++  +     I+ +    +   RLT   F +   S+SPD ++I F S+R
Sbjct: 112 PVISPDGREVAMAAYRGGFFSIWVMRTDGSRLRRLTGGPFDDRGPSWSPDGTRIAFSSER 171

Query: 323 EG---------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--K 365
            G               ++      +    Q+  +QD     FDPVWS  G  + F   +
Sbjct: 172 GGDPVAGSPYRIWTVNVRDGGLTRLTGLPGQQGPAQDGPWEDFDPVWSADGSRVLFVRGR 231

Query: 366 FSGEKF---AIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           F+        I  +  DG    ++ E    + NL  P  SP+GR+  + R   G    + 
Sbjct: 232 FTAPALVSRTIASVPADGGGGPVVTEHTATEGNLLTPAVSPAGRT-AWLRSVPGPARPET 290

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
            ++ ++G    L    A A  P+W+G
Sbjct: 291 ITLFVDGEPVALDGDLAPAP-PRWIG 315



 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 7/64 (10%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSR 408
           P  SP G  +AF   +    ++  ++  G   R +V  S    +Q P W+P GR+LI++ 
Sbjct: 375 PQLSPDGRTVAFAALN----SLWTVRASGGAPRRIVRSSPTAYIQGPVWTPDGRALIYTD 430

Query: 409 KKDG 412
            +DG
Sbjct: 431 DRDG 434


>gi|182435850|ref|YP_001823569.1| hypothetical protein SGR_2057 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178464366|dbj|BAG18886.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 1063

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 24/162 (14%)

Query: 298 TNTLFINISASYSPDSSQ----IVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ LF +  A Y  D S     +VF S R+  + Q+YV  ++GS  +R++ D++A++  P
Sbjct: 54  TDPLFGDGPAHYDQDPSARGDVLVFTSLRDSARPQVYVRDADGS-VRRLTTDRDAAH--P 110

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKD-------GSQERLLVEDS-NLQAPTWSPSGRSL 404
             SP G  + F   S E    G +++D       GS  R L +   N ++PTWSP G  +
Sbjct: 111 ELSPDGRTVVFD--SAEPGPGGTVQRDLWSVGVDGSDLRRLSDTPDNEESPTWSPDGTRI 168

Query: 405 IFSRKKDGDT--GSKLYSIDLNGRNETLI-NTPAY-ASDPQW 442
            ++   DGDT  G +++   + G   T I + PA  A++P W
Sbjct: 169 AYA--CDGDTLRGWQIFEQAVAGGPRTRISDGPAGDATEPSW 208



 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKR 340
           D++SV +  +   RL++T     S ++SPD ++I +  D +     Q++     G  + R
Sbjct: 135 DLWSVGVDGSDLRRLSDTPDNEESPTWSPDGTRIAYACDGDTLRGWQIFEQAVAGGPRTR 194

Query: 341 ISQDKEASYFDPVWSPQGD-----LIAFT 364
           IS        +P W+P  D     L+A+T
Sbjct: 195 ISDGPAGDATEPSWNPVDDDARRGLVAYT 223


>gi|261414780|ref|YP_003248463.1| WD40 domain protein beta Propeller [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371236|gb|ACX73981.1| WD40 domain protein beta Propeller [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 403

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 65/128 (50%), Gaps = 21/128 (16%)

Query: 316 IVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           IV+ + R      +++M ++G++ + +++     +F P  +P G  + F +  G      
Sbjct: 52  IVWATSRANPHHDIWIMNADGTNARALTKSNNVDWF-PRIAPDGSKVLFNRSKGGWVPEN 110

Query: 369 -----EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                EK+ +  +  DG+ E  +VE++     TW P G+S++FSR        K++++DL
Sbjct: 111 DANYPEKWDLWTVGIDGTNETKIVENATWG--TWRPDGKSIVFSR------AGKVFTMDL 162

Query: 424 NGRNETLI 431
             + ETL+
Sbjct: 163 ASKKETLV 170


>gi|148656436|ref|YP_001276641.1| peptidase S41 [Roseiflexus sp. RS-1]
 gi|148568546|gb|ABQ90691.1| peptidase S41 [Roseiflexus sp. RS-1]
          Length = 1082

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 105/279 (37%), Gaps = 67/279 (24%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-TRIDRA 249
            +L V+ RDG     +T   D  L  P  S + +K+A+     E    +++ D T  D A
Sbjct: 219 ENLWVVPRDGGVAERVTSFTDGRLLWPSISADGKKIAF-----ERDFGIWIFDLTSGDMA 273

Query: 250 PKRIGNFRSMILAP-------------RFSSNGKRALISVQ----KDEAMDIYSVDLQSN 292
           P  I   +   L P               S +GK+    V+     D A      D +  
Sbjct: 274 PIPITVRQDAKLTPVRVQTYTRDVQELALSPDGKKIAFIVRGKIFADFADKENERDPRQG 333

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---QDKEASY 349
              R++ T F +   S+SPDS  +V+ SDR G E++Y     G  + R++   + K A  
Sbjct: 334 LAYRVSQTAFRDSDVSWSPDSRSLVYVSDRHGDEEVYRYDFPGRSETRLTYGPKRKSAPC 393

Query: 350 FDP--------------------------------------VWSPQGDLIAFTKFSGEKF 371
           F P                                       WSP    +AF       F
Sbjct: 394 FSPDGRWIAYASGDDEIRLIDVVSGADRGFIRAHFVFGASFSWSPDSRWLAFCAQDERFF 453

Query: 372 A-IGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFS 407
           + + V + D  Q   +   SN+QA  P WSP GR ++F+
Sbjct: 454 SNLYVQRIDEEQPHQISFLSNIQAAGPLWSPDGRFIVFT 492



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 64/158 (40%), Gaps = 8/158 (5%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           R  + AP     G R         A DI+ V       ERLT     ++   +SPD + I
Sbjct: 8   RPYLRAPSLDPTGNRVAFVY----AGDIWLVAADGGRAERLTAHPAGHMLPRWSPDGAAI 63

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---KFSGEKFAI 373
              S R G+  +YV+  +G + +R++     S  +  WSP G+ I FT   +  G     
Sbjct: 64  ACTSTRTGQGDVYVVPLDGGEVRRVTYHDTQSAVE-CWSPDGNAIYFTSQRERQGTAIYR 122

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             +  D     +      L   + SP GR + FS  +D
Sbjct: 123 VAISGDTPIRWIAQPYERLGTVSVSPCGRWIAFSLLRD 160



 Score = 44.7 bits (104), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 5/82 (6%)

Query: 289 LQSNAT-----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           L SNA      +RL++   +N    ++PDS  I F SDR+G E L+V+  +G   +R++ 
Sbjct: 177 LASNAPDADDFQRLSDAPGLNYCPMWTPDSGLIYFVSDRDGCENLWVVPRDGGVAERVTS 236

Query: 344 DKEASYFDPVWSPQGDLIAFTK 365
             +     P  S  G  IAF +
Sbjct: 237 FTDGRLLWPSISADGKKIAFER 258


>gi|326776475|ref|ZP_08235740.1| hypothetical protein SACT1_2307 [Streptomyces cf. griseus
           XylebKG-1]
 gi|326656808|gb|EGE41654.1| hypothetical protein SACT1_2307 [Streptomyces cf. griseus
           XylebKG-1]
          Length = 1080

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 24/162 (14%)

Query: 298 TNTLFINISASYSPDSSQ----IVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ LF +  A Y  D S     +VF S R+  + Q+YV  ++GS  +R++ D++A++  P
Sbjct: 73  TDPLFGDGPAHYDQDPSARGDVLVFTSLRDSARPQVYVRDADGS-VRRLTTDRDAAH--P 129

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKD-------GSQERLLVEDS-NLQAPTWSPSGRSL 404
             SP G  + F   S E    G +++D       GS  R L +   N ++PTWSP G  +
Sbjct: 130 ELSPDGRTVVFD--SAEPGPGGTVQRDLWSVGVDGSDLRRLSDTPDNEESPTWSPDGTRI 187

Query: 405 IFSRKKDGDT--GSKLYSIDLNGRNETLI-NTPAY-ASDPQW 442
            ++   DGDT  G +++   + G   T I + PA  A++P W
Sbjct: 188 AYA--CDGDTLRGWQIFEQAVAGGPRTRISDGPAGDATEPSW 227



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 7/89 (7%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKR 340
           D++SV +  +   RL++T     S ++SPD ++I +  D +     Q++     G  + R
Sbjct: 154 DLWSVGVDGSDLRRLSDTPDNEESPTWSPDGTRIAYACDGDTLRGWQIFEQAVAGGPRTR 213

Query: 341 ISQDKEASYFDPVWSPQGD-----LIAFT 364
           IS        +P W+P  D     L+A+T
Sbjct: 214 ISDGPAGDATEPSWNPVDDDARRGLVAYT 242


>gi|254388227|ref|ZP_05003463.1| amidohydrolase [Streptomyces clavuligerus ATCC 27064]
 gi|197701950|gb|EDY47762.1| amidohydrolase [Streptomyces clavuligerus ATCC 27064]
          Length = 1045

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 26/206 (12%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G+   ++  +     I+ +    +   RLT   F +   S+SPD ++I F S+R
Sbjct: 196 PVISPDGREVAMAAYRGGFFSIWVMRTDGSRLRRLTGGPFDDRGPSWSPDGTRIAFSSER 255

Query: 323 EG---------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--K 365
            G               ++      +    Q+  +QD     FDPVWS  G  + F   +
Sbjct: 256 GGDPVAGSPYRIWTVNVRDGGLTRLTGLPGQQGPAQDGPWEDFDPVWSADGSRVLFVRGR 315

Query: 366 FSGEKF---AIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           F+        I  +  DG    ++ E    + NL  P  SP+GR+  + R   G    + 
Sbjct: 316 FTAPALVSRTIASVPADGGGGPVVTEHTATEGNLLTPAVSPAGRT-AWLRSVPGPARPET 374

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
            ++ ++G    L    A A  P+W+G
Sbjct: 375 ITLFVDGEPVALDGDLAPAP-PRWIG 399



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 7/64 (10%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSR 408
           P  SP G  +AF   +    ++  ++  G   R +V  S    +Q P W+P GR+LI++ 
Sbjct: 459 PQLSPDGRTVAFAALN----SLWTVRASGGAPRRIVRSSPTAYIQGPVWTPDGRALIYTD 514

Query: 409 KKDG 412
            +DG
Sbjct: 515 DRDG 518


>gi|320162538|ref|YP_004175763.1| hypothetical protein ANT_31370 [Anaerolinea thermophila UNI-1]
 gi|319996392|dbj|BAJ65163.1| hypothetical protein ANT_31370 [Anaerolinea thermophila UNI-1]
          Length = 227

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 8/122 (6%)

Query: 312 DSSQIVFESDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +S +IVF  D          +Y+M S+GS + R+S +   +   P WSP+   IAF +F+
Sbjct: 97  NSGKIVFSYDPRDAPSVGYGIYLMDSDGSHRLRLSAEDALTDSQPAWSPEHCRIAFVRFN 156

Query: 368 GEKF-AIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            E    I +M  D GS  ++    +    P WSP G  + F   +DG     L+ +D+NG
Sbjct: 157 HEGSDDIFLMSADGGSVLQITRHPARDTFPDWSPDGMQISFISDRDG--SRNLFVMDVNG 214

Query: 426 RN 427
            +
Sbjct: 215 EH 216



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 22/134 (16%)

Query: 222 NQQKVAYATYDDEDILRV----YLMDTRIDRAPKRIGNFRSMILA--------PRFSSNG 269
           N  K+ + +YD  D   V    YLMD+         G+ R  + A        P +S   
Sbjct: 97  NSGKIVF-SYDPRDAPSVGYGIYLMDSD--------GSHRLRLSAEDALTDSQPAWSPEH 147

Query: 270 KR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R A +    + + DI+ +     +  ++T     +    +SPD  QI F SDR+G   L
Sbjct: 148 CRIAFVRFNHEGSDDIFLMSADGGSVLQITRHPARDTFPDWSPDGMQISFISDRDGSRNL 207

Query: 329 YVMQSNGSDQKRIS 342
           +VM  NG   ++++
Sbjct: 208 FVMDVNGEHVRQLT 221


>gi|197123385|ref|YP_002135336.1| hypothetical protein AnaeK_2985 [Anaeromyxobacter sp. K]
 gi|196173234|gb|ACG74207.1| WD40 domain protein beta Propeller [Anaeromyxobacter sp. K]
          Length = 703

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 11/178 (6%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP    +G+      ++     +  VD        +T+ L ++ + ++ PD   I   + 
Sbjct: 496 APAVRRDGRTIAFWTREGGRTRLRVVDADGTGARVVTDALQLSGAPAWMPDGRSIAVGAI 555

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDG 380
            EG  +L+ +  +G +   +  +  A   DP W+P GDL+AFT    G  F +  +  DG
Sbjct: 556 VEGAPRLFRVPLDGGEPAALVAEPSA---DPAWAPAGDLLAFTGADVGTTFPLRAVNADG 612

Query: 381 SQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSIDL-NGRNETLINTP 434
           S  R+  L      +   + P GRS+   R   G+   K L ++DL +G +  L+  P
Sbjct: 613 SARRMPPLTLTRGARHVAFLPDGRSIAVLR---GEIRRKHLAAVDLASGASRPLVVLP 667


>gi|237715132|ref|ZP_04545613.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262408917|ref|ZP_06085462.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294648224|ref|ZP_06725761.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294810023|ref|ZP_06768697.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|229444965|gb|EEO50756.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262353128|gb|EEZ02223.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292636412|gb|EFF54893.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294442869|gb|EFG11662.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 1119

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 65/141 (46%), Gaps = 18/141 (12%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
           A  SPD S+IVF      K  +Y + + G    +++   + SY  +PVWSP G  IAF  
Sbjct: 28  ARISPDGSEIVFCY----KGDIYKVPAQGGTAVQLTT--QTSYEANPVWSPDGKQIAFAS 81

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGS-------- 416
                F + +M  DG   R L   S  + P T++P G+ + FS        S        
Sbjct: 82  DRNGNFDLFIMPADGGAARRLTYHSASEIPSTFTPDGKYVFFSASIQDPASSALFPTGAM 141

Query: 417 -KLYSIDL-NGRNETLINTPA 435
            +LY + +  GR E ++ TPA
Sbjct: 142 TELYKVPVAGGRTEQVLGTPA 162



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  Q     +LT       +  +SPD  QI F SDR G   L++M ++G   +R++
Sbjct: 44  DIYKVPAQGGTAVQLTTQTSYEANPVWSPDGKQIAFASDRNGNFDLFIMPADGGAARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++P G  + F+
Sbjct: 104 Y-HSASEIPSTFTPDGKYVFFS 124


>gi|284925405|gb|ADC27757.1| translocation protein TolB [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 402

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 12/196 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P++   +Q + Y T  D D   +Y  D   ++A K + +   M++A   + +G + L+++
Sbjct: 178 PKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKILSS-GGMVVASDVNVDGSKLLVTM 236

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYV--MQS 333
              +  D+Y  DL +    +LTN   I+++ ++   D S++VF SDR G   +++  + S
Sbjct: 237 APKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNS 296

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDS 390
           N ++Q        ++      S   D + ++     +   F I +M  +    R L  + 
Sbjct: 297 NSAEQVVFHGRNNSAV-----STYKDFLVYSSREPNQAGVFNIYLMSINSDYIRQLTANG 351

Query: 391 NLQAPTWSPSGRSLIF 406
               P +S  G S++F
Sbjct: 352 KNLFPRFSSDGGSIVF 367


>gi|32265933|ref|NP_859965.1| translocation protein TolB [Helicobacter hepaticus ATCC 51449]
 gi|67461999|sp|Q7VJ16|TOLB_HELHP RecName: Full=Protein tolB; Flags: Precursor
 gi|32261982|gb|AAP77031.1| Acetyl esterase TolB [Helicobacter hepaticus ATCC 51449]
          Length = 419

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 75/375 (20%), Positives = 151/375 (40%), Gaps = 27/375 (7%)

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
           + G KV ++++ DL+ S  F +           N +S   ++D+      +L   +V K 
Sbjct: 45  DFGAKVLKMLAADLKVSGHFQVYDGS------VNKNSEVAYKDYADKKIDLLAQIKVSKS 98

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRIL 178
             + L     L+D+   K+I  K +  +    +  IAH +  D+   I     ++  R++
Sbjct: 99  -SNSLTGTISLYDINTSKRIYVKDYTENDVKRFPFIAHRMCIDVNSYIQAPSIEWMQRLV 157

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDIL 237
            +S+   SG   NS  ++       + +       +F       Q+ + Y  Y D   IL
Sbjct: 158 VLSQYTTSG---NSEILIADYTLTYQKVVVKGGLNIFPKWVDSKQESIYYTKYLDVPTIL 214

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +  L    I++     G    + +    S NG+  ++S+      D+Y  + +S    RL
Sbjct: 215 KHNLTTGHIEQLVGSEG----IAVVSDVSKNGENLILSLSPTALSDLYLYNTKSKNLRRL 270

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN   I++   +  +  +I+F SDR G   +++M+ +G   +++         +   +  
Sbjct: 271 TNYSGIDVDGKFVNNEKEIIFVSDRLGYPNIFMMRLDGGGTEQVVLHGRN---NSAVTSN 327

Query: 358 GDLIAFT------KFSGEKFAIGVMK-KDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRK 409
           G    +T      +F    F + ++    GS   R L      Q P +S  G ++++ + 
Sbjct: 328 GKYAVYTSRETNNEFGANTFNLYLISLAPGSNYIRRLTASGKNQMPKYSNDGGTIMYLKY 387

Query: 410 KDGDTGSKLYSIDLN 424
               +   +  ID N
Sbjct: 388 YKAQSALGIIRIDYN 402


>gi|88597176|ref|ZP_01100411.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218561793|ref|YP_002343572.1| translocation protein TolB [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|32699721|sp|Q9PJ14|TOLB_CAMJE RecName: Full=Protein tolB; Flags: Precursor
 gi|88190237|gb|EAQ94211.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359499|emb|CAL34283.1| putative TolB precursor protein [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|315926950|gb|EFV06312.1| tol-Pal system beta propeller repeat protein TolB [Campylobacter
           jejuni subsp. jejuni DFVF1099]
          Length = 402

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 12/196 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P++   +Q + Y T  D D   +Y  D   ++A K + +   M++A   + +G + L+++
Sbjct: 178 PKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKILSS-GGMVVASDVNVDGSKLLVTM 236

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYV--MQS 333
              +  D+Y  DL +    +LTN   I+++ ++   D S++VF SDR G   +++  + S
Sbjct: 237 APKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNS 296

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDS 390
           N ++Q        ++      S   D + ++     +   F I +M  +    R L  + 
Sbjct: 297 NSAEQVVFHGRNNSAV-----STYKDFLVYSSREPNQAGVFNIYLMSINSDYIRQLTANG 351

Query: 391 NLQAPTWSPSGRSLIF 406
               P +S  G S++F
Sbjct: 352 KNLFPRFSSDGGSIVF 367


>gi|29346818|ref|NP_810321.1| putative Tricorn-like protease [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29338715|gb|AAO76515.1| putative Tricorn-like protease [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 1102

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 23/151 (15%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
           A  SPD  +IVF      K  +Y +   G    +++   +ASY  +PVWSP G  IAF  
Sbjct: 28  ARISPDGKEIVFCY----KGDIYKVPVQGGTATQLTT--QASYEANPVWSPDGKQIAFAS 81

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDG-------DTG-- 415
                F + +M  DG   R L   S  + P+ ++P G+ ++FS             TG  
Sbjct: 82  DRNGNFDLFIMSADGGTARRLTYHSASEIPSAFTPDGKFVLFSASIQDPAQSALFPTGAM 141

Query: 416 SKLYSIDL-NGRNETLINTPAYASDPQWVGF 445
           ++LY + +  GR E ++ TPA     +WV F
Sbjct: 142 TELYKVPVTGGRTEQVLATPA-----EWVCF 167



 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R S +GK  +   + D    IY V +Q     +LT       +  +SPD  QI F SDR 
Sbjct: 29  RISPDGKEIVFCYKGD----IYKVPVQGGTATQLTTQASYEANPVWSPDGKQIAFASDRN 84

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           G   L++M ++G   +R++    AS     ++P G  + F+
Sbjct: 85  GNFDLFIMSADGGTARRLTY-HSASEIPSAFTPDGKFVLFS 124


>gi|86149640|ref|ZP_01067870.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85839908|gb|EAQ57167.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 402

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 12/196 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P++   +Q + Y T  D D   +Y  D   ++A K + +   M++A   + +G + L+++
Sbjct: 178 PKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKILSS-GGMVVASDVNVDGSKLLVTM 236

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYV--MQS 333
              +  D+Y  DL +    +LTN   I+++ ++   D S++VF SDR G   +++  + S
Sbjct: 237 APKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNS 296

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDS 390
           N ++Q        ++      S   D + ++     +   F I +M  +    R L  + 
Sbjct: 297 NSAEQVVFHGRNNSAV-----STYKDFLVYSSREPNQAGVFNIYLMSINSDYIRQLTANG 351

Query: 391 NLQAPTWSPSGRSLIF 406
               P +S  G S++F
Sbjct: 352 KNLFPRFSSDGGSIVF 367


>gi|253572275|ref|ZP_04849678.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251838050|gb|EES66138.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 877

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 71/151 (47%), Gaps = 23/151 (15%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
           A  SPD  +IVF      K  +Y +   G    +++   +ASY  +PVWSP G  IAF  
Sbjct: 28  ARISPDGKEIVFCY----KGDIYKVPVQGGTATQLTT--QASYEANPVWSPDGKQIAFAS 81

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDG-------DTG-- 415
                F + +M  DG   R L   S  + P+ ++P G+ ++FS             TG  
Sbjct: 82  DRNGNFDLFIMPADGGTARRLTYHSASEIPSAFTPDGKFVLFSASIQDPAQSALFPTGAM 141

Query: 416 SKLYSIDL-NGRNETLINTPAYASDPQWVGF 445
           ++LY + +  GR E ++ TPA     +WV F
Sbjct: 142 TELYKVPVTGGRTEQVLATPA-----EWVCF 167



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R S +GK  +   + D    IY V +Q     +LT       +  +SPD  QI F SDR 
Sbjct: 29  RISPDGKEIVFCYKGD----IYKVPVQGGTATQLTTQASYEANPVWSPDGKQIAFASDRN 84

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           G   L++M ++G   +R++    AS     ++P G  + F+
Sbjct: 85  GNFDLFIMPADGGTARRLTY-HSASEIPSAFTPDGKFVLFS 124



 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 41/154 (26%)

Query: 260 ILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           I   RFS     A +S    +       D++        T+++TNT       S++PD+ 
Sbjct: 308 IATLRFSQGATSASVSPDGKQVAFIVRGDVFVTSTDYATTKQITNTPAKEAGVSFAPDNR 367

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +V+ S+R G  QLY          +I++ +EA++      P   LI             
Sbjct: 368 TLVYASERTGNWQLYTA--------KIARKEEANF------PNATLI------------- 400

Query: 375 VMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIF 406
                  +E +L+    ++   P +SP G+ L F
Sbjct: 401 -------EEEVLLPSKTIERAYPQYSPDGKELAF 427


>gi|254387973|ref|ZP_05003210.1| amidohydrolase [Streptomyces clavuligerus ATCC 27064]
 gi|197701697|gb|EDY47509.1| amidohydrolase [Streptomyces clavuligerus ATCC 27064]
          Length = 1069

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 28/174 (16%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G+    S  +D    +++V        R T   + +   ++SPD ++I F S+R
Sbjct: 98  PTHSPDGELVAFSAYRDGNHHLWTVRPDGTGLRRRTEGPWDDRGPAWSPDGTRIAFASER 157

Query: 323 EGKE------QLYVMQSNGSDQKRIS---------QDKEASYFDPVWSPQGDLIAFTKFS 367
            G        +++V+     +  R++         QD     +DP WSP G  I F +  
Sbjct: 158 GGDPATGAPYRIHVLDLRTGNLTRLTGLSGQQGPLQDGPWEDYDPTWSPDGTRILFVRGQ 217

Query: 368 GEKFAIG---------VMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
           G   A G          +   G+     V     D  + AP  +P GR L + R
Sbjct: 218 GVTTATGPALDARTVAAVSATGTGAVTTVHTGTADGQIIAPALAPDGRRLAYLR 271



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 25/164 (15%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVW 354
           RLT     N +AS +P    ++ E     +  L+ + ++G     ++  D E +   P  
Sbjct: 49  RLTEA--TNGAASLAPGGGGLIAEV----QSTLWSLPADGGRATPLTPADLEPAR--PTH 100

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGD 413
           SP G+L+AF+ +      +  ++ DG+  R   E   + + P WSP G  + F+ ++ GD
Sbjct: 101 SPDGELVAFSAYRDGNHHLWTVRPDGTGLRRRTEGPWDDRGPAWSPDGTRIAFASERGGD 160

Query: 414 --TGS--KLYSID-----------LNGRNETLINTPAYASDPQW 442
             TG+  +++ +D           L+G+   L + P    DP W
Sbjct: 161 PATGAPYRIHVLDLRTGNLTRLTGLSGQQGPLQDGPWEDYDPTW 204


>gi|302326672|gb|ADL25873.1| oxidoreductase, Gfo/Idh/MocA family [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 668

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 261 LAPRF----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           LAP +    + +GK      +++ + DIY++        RLT    +N    Y  +   I
Sbjct: 480 LAPSYLHGITPDGKTLAYCAERNGSYDIYTIPAAGGNETRLTTAFGLNDGPEYDCNGEYI 539

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTK 365
            F S+R G+ Q + M+++GS+Q +++ D   + + P  SP      ++A+T+
Sbjct: 540 WFNSERSGRMQAFCMKADGSEQTQMTHDLHWNTWFPHISPDRQKVVMVAYTE 591


>gi|332668331|ref|YP_004451119.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
 gi|332337145|gb|AEE54246.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
          Length = 1075

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 30/199 (15%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           SSNGK      + +    ++   ++   T+R+TNT     S S+SPD   +++ S+R   
Sbjct: 329 SSNGKEVAFVFRGE----VFVTSVEGGVTKRITNTPEQERSVSFSPDGKALLYSSERGNS 384

Query: 326 EQLYVMQSNGSDQKR------------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            ++Y  + + S++              I   KE   + P +SP G  IAF +   ++  +
Sbjct: 385 WKIYETKISRSEEPYFYASTLLKETPIIENTKEN--YQPEYSPDGKEIAFIE---DRMTL 439

Query: 374 GVMKKDGSQERLLVEDSNL-------QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            V      Q R L+ D  L       Q  +WSP G+ ++F     G    ++  I  NG+
Sbjct: 440 KVYNIASKQTRTLLTDQELFSMGDNDQYFSWSPDGKWILFDYSVPGVPTGEIGIIASNGK 499

Query: 427 NETLINTPAYASD--PQWV 443
           ++ +  T +   D  P+W+
Sbjct: 500 SKVINLTESGFQDSRPKWI 518



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 78/185 (42%), Gaps = 29/185 (15%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN------ATERLTNTLFI- 303
           KRI N      +  FS +GK  L S ++  +  IY   +  +      A+  L  T  I 
Sbjct: 354 KRITNTPEQERSVSFSPDGKALLYSSERGNSWKIYETKISRSEEPYFYASTLLKETPIIE 413

Query: 304 ----NISASYSPDSSQIVFESDREGKEQLYVMQSNG-----SDQKRISQDKEASYFDPVW 354
               N    YSPD  +I F  DR    ++Y + S       +DQ+  S      YF   W
Sbjct: 414 NTKENYQPEYSPDGKEIAFIEDRM-TLKVYNIASKQTRTLLTDQELFSMGDNDQYFS--W 470

Query: 355 SPQGDLIAFTKF-----SGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFS 407
           SP G  I F        +GE   IG++  +G  + + + +S  Q   P W   G+++++ 
Sbjct: 471 SPDGKWILFDYSVPGVPTGE---IGIIASNGKSKVINLTESGFQDSRPKWILGGKAMVWF 527

Query: 408 RKKDG 412
             +DG
Sbjct: 528 SNRDG 532


>gi|315929958|gb|EFV09112.1| tol-Pal system beta propeller repeat protein TolB [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 404

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 12/196 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P++   +Q + Y T  D D   +Y  D   ++A K + +   M++A   + +G + L+++
Sbjct: 180 PKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKILSS-GGMVVASDVNVDGSKLLVTM 238

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYV--MQS 333
              +  D+Y  DL +    +LTN   I+++ ++   D S++VF SDR G   +++  + S
Sbjct: 239 APKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGSDDSKVVFVSDRLGYPNIFMQDLNS 298

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDS 390
           N ++Q        ++      S   D + ++     +   F I +M  +    R L  + 
Sbjct: 299 NSAEQVVFHGRNNSAV-----STYKDFLVYSSREPNQAGVFNIYLMSINSDYIRQLTANG 353

Query: 391 NLQAPTWSPSGRSLIF 406
               P +S  G S++F
Sbjct: 354 KNLFPRFSSDGGSIVF 369


>gi|294666207|ref|ZP_06731461.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604025|gb|EFF47422.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 779

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 7/143 (4%)

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +++ S SPD + + + S   DR G   L     N   +   +     S   P WSP G  
Sbjct: 228 DLTPSLSPDGAMVAYASLTRDRAGTSILVKTTDNAYPRVLETPGPGVSDRLPAWSPDGRQ 287

Query: 361 IAFTK----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           IAF++     S             S+E +  + +++ + +WSP GR+L+F         S
Sbjct: 288 IAFSRQAPDGSCRVMIAAATGPAASREVVRCDGADMLSFSWSPDGRALVFGSMTGTHGAS 347

Query: 417 KLYSIDLNGRNETLINTPAYASD 439
           ++  +DL  R    ++ PA A D
Sbjct: 348 RMRRLDLATRQWQALDYPAQAGD 370



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 13/225 (5%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRA 272
             P  SP+   VAYA+   +      L+ T  +  P+ +      +    P +S +G++ 
Sbjct: 229 LTPSLSPDGAMVAYASLTRDRAGTSILVKTTDNAYPRVLETPGPGVSDRLPAWSPDGRQI 288

Query: 273 LISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQ 327
             S Q  +    + I +    + + E +       +S S+SPD   +VF S     G  +
Sbjct: 289 AFSRQAPDGSCRVMIAAATGPAASREVVRCDGADMLSFSWSPDGRALVFGSMTGTHGASR 348

Query: 328 LYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +  +       + +    +A  FD  P +SP G+ I F +         +  + G  ERL
Sbjct: 349 MRRLDLATRQWQALDYPAQAGDFDYAPRYSPDGNWIVFLRNPQLGDLWRIPAEGGVAERL 408

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             ++++++  +W P G  LIF R+ D +  ++LY +DL  R+ +L
Sbjct: 409 THDNADIRGWSWLPDGSGLIFGRRVDSE--ARLYRLDL--RDHSL 449


>gi|282890326|ref|ZP_06298854.1| hypothetical protein pah_c016o029 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499708|gb|EFB41999.1| hypothetical protein pah_c016o029 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 459

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 63/283 (22%), Positives = 121/283 (42%), Gaps = 33/283 (11%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSE----SVVSGIIKNSLCVMDRDGANIRYLT 207
           RK+ H I+D +Y+++  + G   SR+L+  +    S       + +   D DG N R LT
Sbjct: 147 RKVMHQIADTLYKALFHQPGIATSRVLYTVKTPDRSTQEKKWISEIWEADYDGYNPRKLT 206

Query: 208 PSR--------DQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRS 258
             +          I  +P FS     + Y +Y + +  + V  ++  I R   R+   R 
Sbjct: 207 THKTVGYCVTPSYIPAKPGFSSG--SMIYTSYKNGQPKIYVAQVNEGIGR---RLNYVRG 261

Query: 259 MILAPRFSSNGKRAL----ISVQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPD 312
             L P  S    +      +    D  +  +S++  +    R   +    +  + ++SPD
Sbjct: 262 NQLMPTVSPQRDQIAFICDVGGNPDLFIQPFSIEKGAEGKPRQIFSCGQSVQGTPTFSPD 321

Query: 313 SSQIVFESDREGKEQLYVMQSNGSD-------QKRISQDKEASYFDPVWSPQGDLIAFTK 365
             +I F S+++G  ++Y++     +        K I++    S   P WSP G  IA++ 
Sbjct: 322 GKKIAFASNKDGSPRVYILDIPKENVLLKDIKPKLITKYSRES-TAPSWSPDGTKIAYSS 380

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFS 407
            +     I V      +E+ +   S + + P+WSP+ + LI++
Sbjct: 381 LTQGTRQIWVYDLRKQEEKQITFGSGHKENPSWSPNSKMLIYN 423



 Score = 44.7 bits (104), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 29/168 (17%)

Query: 283 DIYSVDLQSNATERLTN--TLFINISASYSP-----DSSQIVFESDREGKEQLYVMQSNG 335
           +I+  D       +LT   T+   ++ SY P      S  +++ S + G+ ++YV Q N 
Sbjct: 191 EIWEADYDGYNPRKLTTHKTVGYCVTPSYIPAKPGFSSGSMIYTSYKNGQPKIYVAQVNE 250

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFT------------KFSGEKFAIGVMKKDGSQE 383
              +R++  +  +   P  SPQ D IAF              FS EK A      +G   
Sbjct: 251 GIGRRLNYVR-GNQLMPTVSPQRDQIAFICDVGGNPDLFIQPFSIEKGA------EGKPR 303

Query: 384 RLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           ++     ++Q  PT+SP G+ + F+  KDG    ++Y +D+   N  L
Sbjct: 304 QIFSCGQSVQGTPTFSPDGKKIAFASNKDGS--PRVYILDIPKENVLL 349


>gi|261415324|ref|YP_003249007.1| oxidoreductase domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371780|gb|ACX74525.1| oxidoreductase domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 668

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 261 LAPRF----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           LAP +    + +GK      +++ + DIY++        RLT    +N    Y  +   I
Sbjct: 480 LAPSYLHGITPDGKTLAYCAERNGSYDIYTIPAAGGNETRLTTAFGLNDGPEYDCNGEYI 539

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTK 365
            F S+R G+ Q + M+++GS+Q +++ D   + + P  SP      ++A+T+
Sbjct: 540 WFNSERSGRMQAFCMKADGSEQTQMTHDLHWNTWFPHISPDRQKVVMVAYTE 591


>gi|294817520|ref|ZP_06776162.1| Amidohydrolase [Streptomyces clavuligerus ATCC 27064]
 gi|326446154|ref|ZP_08220888.1| hypothetical protein SclaA2_34047 [Streptomyces clavuligerus ATCC
           27064]
 gi|294322335|gb|EFG04470.1| Amidohydrolase [Streptomyces clavuligerus ATCC 27064]
          Length = 1087

 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 28/174 (16%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G+    S  +D    +++V        R T   + +   ++SPD ++I F S+R
Sbjct: 116 PTHSPDGELVAFSAYRDGNHHLWTVRPDGTGLRRRTEGPWDDRGPAWSPDGTRIAFASER 175

Query: 323 EGKE------QLYVMQSNGSDQKRIS---------QDKEASYFDPVWSPQGDLIAFTKFS 367
            G        +++V+     +  R++         QD     +DP WSP G  I F +  
Sbjct: 176 GGDPATGAPYRIHVLDLRTGNLTRLTGLSGQQGPLQDGPWEDYDPTWSPDGTRILFVRGQ 235

Query: 368 GEKFAIG---------VMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
           G   A G          +   G+     V     D  + AP  +P GR L + R
Sbjct: 236 GVTTATGPALDARTVAAVSATGTGAVTTVHTGTADGQIIAPALAPDGRRLAYLR 289



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 25/164 (15%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVW 354
           RLT     N +AS +P    ++ E     +  L+ + ++G     ++  D E +   P  
Sbjct: 67  RLTEA--TNGAASLAPGGGGLIAEV----QSTLWSLPADGGRATPLTPADLEPAR--PTH 118

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGD 413
           SP G+L+AF+ +      +  ++ DG+  R   E   + + P WSP G  + F+ ++ GD
Sbjct: 119 SPDGELVAFSAYRDGNHHLWTVRPDGTGLRRRTEGPWDDRGPAWSPDGTRIAFASERGGD 178

Query: 414 --TGS--KLYSID-----------LNGRNETLINTPAYASDPQW 442
             TG+  +++ +D           L+G+   L + P    DP W
Sbjct: 179 PATGAPYRIHVLDLRTGNLTRLTGLSGQQGPLQDGPWEDYDPTW 222


>gi|154148092|ref|YP_001406273.1| translocation protein TolB [Campylobacter hominis ATCC BAA-381]
 gi|153804101|gb|ABS51108.1| protein TolB [Campylobacter hominis ATCC BAA-381]
          Length = 417

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 8/210 (3%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P+++   Q   Y TY               + +  +I   R M +A   S +G + LI+ 
Sbjct: 195 PKWANKAQNAFYYTYYINKNTPAIFKYNLSNGSKSKIFTGRGMTIASDVSDDGSKLLITN 254

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              +  DI+  +L S + +++TN   I+++ ++  + S+IVF SDR G   ++    +G 
Sbjct: 255 APKDQPDIFLYNLNSGSMKQITNYPGIDVNGNFVDNDSRIVFVSDRLGYPNIFAQSIDGG 314

Query: 337 D-QKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           + ++ + Q K     +   S  G+ I + ++  G  F I ++    +  R L  D     
Sbjct: 315 NVEQMVFQGKN----NNSISTHGNYIVYSSRDGGGSFNIYLISTGTNLIRQLTADGKNMF 370

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           P +S  G S++F   K  + GS +  I +N
Sbjct: 371 PRFSSDGGSVMF--IKHSNFGSSIGIIRIN 398


>gi|148657636|ref|YP_001277841.1| peptidase S9 prolyl oligopeptidase [Roseiflexus sp. RS-1]
 gi|148569746|gb|ABQ91891.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Roseiflexus sp. RS-1]
          Length = 697

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 14/109 (12%)

Query: 351 DPVWSPQGDLIAFTKFS------GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           DP   P G ++AF + +        + AI +   DG   R      N  +P WSP GR L
Sbjct: 21  DPQVCPDGRVVAFVRVTIDRPANANRRAIWIAPTDGGPPRRFTSGVNDTSPRWSPDGRWL 80

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGFM 446
            F R + GD   +LY I  +G     + +       PA++ D +W+ F+
Sbjct: 81  AFVRGR-GDQTPQLYVIRRDGGESRCLTSLPQGVSHPAWSPDGRWIAFL 128


>gi|118589526|ref|ZP_01546931.1| hypothetical protein SIAM614_03780 [Stappia aggregata IAM 12614]
 gi|118437612|gb|EAV44248.1| hypothetical protein SIAM614_03780 [Stappia aggregata IAM 12614]
          Length = 276

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 13/137 (9%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           ++S+ L      ++T          Y+PD   I F  +R G  QL+ ++ +GS  +++++
Sbjct: 138 VFSIGLDGGEERQITREFDHCDGPDYTPDGKWIWFNGERAGSVQLWRVRPDGSCLQQMTK 197

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSG--------EKFAIGVMKKDGSQERLLVE----DSN 391
           D+  ++F P  SP G  +A+  +              + +M  +G   R+L+        
Sbjct: 198 DERVNWF-PHPSPDGKSVAYLAYEAGTTGHPAERTVELRLMPAEGGSPRILLSLFGGQGT 256

Query: 392 LQAPTWSPSGRSLIFSR 408
           L  P+W+P  R   + R
Sbjct: 257 LNVPSWAPDSRRFAYMR 273


>gi|170574759|ref|XP_001892951.1| WD40-like Beta Propeller Repeat family protein [Brugia malayi]
 gi|158601263|gb|EDP38222.1| WD40-like Beta Propeller Repeat family protein [Brugia malayi]
          Length = 693

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 26/168 (15%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI+ V+       RLTNT   +   + SPD  +IVF S R G  ++++M S+G++ ++++
Sbjct: 158 DIFKVNEFGTVITRLTNTAGYDAEGAVSPDGRKIVFTSLRSGDPEIWIMNSDGTEPEQLT 217

Query: 343 QDKEASYFDPVWSPQG--------------------DLIAFTKFSGEKFAIGVMKKDGSQ 382
            D+      P +SP G                    DL+++   S  +  +  +  DGS 
Sbjct: 218 -DELGYDGGPFFSPDGSKIVFRASRPNTTERIQTYKDLLSYNLVSPLEMELYTINVDGSG 276

Query: 383 -ERLLVEDSNLQAPTWSPSGRSLIFS---RKKDGDTGS-KLYSIDLNG 425
            +++     +  AP + P  R +IFS    +  G  G+  LY ID  G
Sbjct: 277 LKKVTSLGGSNWAPFYMPDNRHIIFSSNFNETGGHFGAFNLYMIDEAG 324



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++  V+   N   RLTNT   +  AS S D   I+F S R G   L++M  +G + K+I
Sbjct: 524 FELIKVNKYGNFIRRLTNTSGYDGEASISSDGKHIIFTSRRNGDPNLWIMDIDGKNAKQI 583

Query: 342 SQ 343
           ++
Sbjct: 584 TK 585


>gi|23098536|ref|NP_692002.1| acylaminoacyl-peptidase [Oceanobacillus iheyensis HTE831]
 gi|22776762|dbj|BAC13037.1| acylaminoacyl-peptidase [Oceanobacillus iheyensis HTE831]
          Length = 667

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 62/111 (55%), Gaps = 6/111 (5%)

Query: 259 MILAPRFS-SNGKRALISVQKDEAMD----IYSVDLQSNATERLTNTLFINISASYSPDS 313
           ++  P ++ SN +   +S + +E  +    +YS D+ +N T++ T     N +   +P +
Sbjct: 18  ILSGPTYTASNNRFTYVSTKVNEDNEYESHVYSTDISTNQTKQWTFGKHSNTNFRINPSN 77

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +Q VF+S R G  QL+++  +G + K+I+  ++ +Y  P W+P G  I F+
Sbjct: 78  TQAVFQSTRSGTSQLWLIDLDGGEPKQITFFQKGAY-SPRWAPDGSSIFFS 127


>gi|284040891|ref|YP_003390821.1| hypothetical protein Slin_6060 [Spirosoma linguale DSM 74]
 gi|283820184|gb|ADB42022.1| WD40 domain protein beta Propeller [Spirosoma linguale DSM 74]
          Length = 510

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 57/228 (25%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           +RD   + P  SPN+Q++A+ +  + + L +Y+M+           N R +   P     
Sbjct: 244 TRDGSNWRPVASPNRQQIAFISNVNTE-LHLYVMNANGT-------NIRQVTTVP----- 290

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                IS        +Y  DL                S S+SPD +Q+++ S+    ++L
Sbjct: 291 -----IS-------GLYQTDL----------------SFSWSPDGTQLLYPSN----DRL 318

Query: 329 YVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIA--FTKFSGEKFAIGVMKKDGSQERL 385
           Y ++++G+  + +SQ      F    W+PQG+ IA   T  S     I     DGS  +L
Sbjct: 319 YAVRTDGTGLRVVSQASGGRVFAGCDWTPQGNRIAARTTGTSVYDNEITTFMADGSALKL 378

Query: 386 LVE--DSNLQAPTWSPSGRSLIFSRKKDG-------DTGSKLYSIDLN 424
           +     + +  P +S  GR L+FS    G          ++LY +DLN
Sbjct: 379 VYSQRSARVGNPAFSVDGRRLVFSADSSGFMNEQGRQLDARLYLLDLN 426


>gi|255548311|ref|XP_002515212.1| conserved hypothetical protein [Ricinus communis]
 gi|223545692|gb|EEF47196.1| conserved hypothetical protein [Ricinus communis]
          Length = 666

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 8/86 (9%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFD--PVWSPQGDL 360
           N   S SPD   +VF S R G + LY++ +  G     I Q  E  + D  P WSP+GDL
Sbjct: 462 NAFPSCSPDGESLVFRSGRSGHKNLYIIDAVEGEFNGGIRQLTEGPWIDTMPSWSPKGDL 521

Query: 361 IAFTKFSGEK-----FAIGVMKKDGS 381
           IAF+           F+I V++ DGS
Sbjct: 522 IAFSSNRHNPNNVNAFSIYVIRPDGS 547



 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 71/161 (44%), Gaps = 31/161 (19%)

Query: 308 SYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK- 365
           S+SPD + + F  D  +    L V++SNGS +  + +D+ A  F   WSP    + FT  
Sbjct: 360 SFSPDGNLMAFNPDFVDSSGGLKVVKSNGSKRWTLIKDRVA--FCNSWSPTEKHVIFTSL 417

Query: 366 ---FSGEKFAIGV---------MKKDGSQ-----ERLLVEDSNLQA-PTWSPSGRSLIFS 407
              F   K  + +         +K D ++     + L  ED+   A P+ SP G SL+F 
Sbjct: 418 GPIFESAKTTVQIARVTFKPSDLKSDHNEVSCDVKILTREDTGNNAFPSCSPDGESLVF- 476

Query: 408 RKKDGDTGSK-LYSID-----LNGRNETLINTPAYASDPQW 442
             + G +G K LY ID      NG    L   P   + P W
Sbjct: 477 --RSGRSGHKNLYIIDAVEGEFNGGIRQLTEGPWIDTMPSW 515



 Score = 36.6 bits (83), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 352 PVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           P +SP G+L+AF   F      + V+K +GS+   L++D      +WSP+ + +IF+
Sbjct: 359 PSFSPDGNLMAFNPDFVDSSGGLKVVKSNGSKRWTLIKDRVAFCNSWSPTEKHVIFT 415


>gi|148273953|ref|YP_001223514.1| hypothetical protein CMM_2769 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831883|emb|CAN02853.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 312

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 5/97 (5%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----EGKEQLY 329
           +  + +   +I+ V +    T +LT+  F +  A +SPD   + F S+R     G  QL+
Sbjct: 154 LDARGEWTTNIHLVPVDGGPTTQLTDDGFPDDGAEFSPDGGWLYFNSERGSDLPGHAQLF 213

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            M+++G+D  + + D+  ++F P  SP G+ I +  F
Sbjct: 214 TMRTDGTDTHQFTSDERVNWF-PHPSPDGEHIVYLSF 249


>gi|289662098|ref|ZP_06483679.1| hypothetical protein XcampvN_03108 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 784

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 6/123 (4%)

Query: 305 ISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDL 360
           +S S+SPD   +VF S     G  +L  +       + +    +AS FD  P +SP G  
Sbjct: 329 LSFSWSPDGRALVFGSMTGTHGAARLRRLDLETGQWQTLDYSAQASDFDYAPRYSPDGHW 388

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           I F +         +  + G+ ERL  ++++++  +W P G  LIF R+ D +  ++LY 
Sbjct: 389 IVFVRNPQLGDLWRIPAQGGAAERLTHDNADIRGWSWLPDGSGLIFGRRVDSE--ARLYR 446

Query: 421 IDL 423
           +DL
Sbjct: 447 LDL 449



 Score = 44.7 bits (104), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 17/160 (10%)

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +++ S SPD + + + S   DR G   L     N   +   +    +S   P WSP G  
Sbjct: 233 DLTPSLSPDGAMVAYASLTGDRAGTSILVKTTDNAYPRVLETPAPGSSDRLPAWSPDGRE 292

Query: 361 IAFTKFSGEKFA----IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           IAF++ + +               ++E    + +++ + +WSP GR+L+F         +
Sbjct: 293 IAFSRQARDGVCRVMIAAATGPAAAREVARCDAADMLSFSWSPDGRALVFGSMTGTHGAA 352

Query: 417 KLYSIDL-NGRNETLINT---------PAYASDPQWVGFM 446
           +L  +DL  G+ +TL  +         P Y+ D  W+ F+
Sbjct: 353 RLRRLDLETGQWQTLDYSAQASDFDYAPRYSPDGHWIVFV 392


>gi|311029453|ref|ZP_07707543.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Bacillus sp. m3-13]
          Length = 663

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 2/81 (2%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           IY  DL+ NA    T+      S  +SPD S++ F S+R  K QLYVM  NG + ++++ 
Sbjct: 47  IYVGDLEGNAVP-FTSGKGRATSPRWSPDGSKLAFVSNRNEKSQLYVMPVNGGEAEQVTF 105

Query: 344 DKEASYFDPVWSPQGDLIAFT 364
            K  +   PVWSP G  + F+
Sbjct: 106 CKNGAR-GPVWSPCGTKLLFS 125



 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 3/92 (3%)

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           V E + E +  +YV    G+     S    A+   P WSP G  +AF     EK  + VM
Sbjct: 36  VHEEENEYRSTIYVGDLEGNAVPFTSGKGRAT--SPRWSPDGSKLAFVSNRNEKSQLYVM 93

Query: 377 KKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFS 407
             +G + E++    +  + P WSP G  L+FS
Sbjct: 94  PVNGGEAEQVTFCKNGARGPVWSPCGTKLLFS 125


>gi|268317283|ref|YP_003291002.1| WD40 domain-containing protein beta Propeller [Rhodothermus marinus
           DSM 4252]
 gi|262334817|gb|ACY48614.1| WD40 domain protein beta Propeller [Rhodothermus marinus DSM 4252]
          Length = 982

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 11/150 (7%)

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGS 336
           + + + +Y ++ +   T      L    S ++SPD +++ F + D  G   LYV++ +G 
Sbjct: 375 EGDVLHLYDLEREELVTTYRFPGLVALYSPTWSPDGARLAFSAIDEGGWIDLYVLEVSGG 434

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTK---FSGEKFAIGVMKKD---GSQERLLVEDS 390
             +R+++D      DP WSP G  + F       G+++ + +   D   G   +L     
Sbjct: 435 RLERLTRDLYDDR-DPAWSPDGRYLVFASDRTAWGDRYGMNLFLYDFNTGQIHQLTDGWR 493

Query: 391 NLQAPTWSPSGRSLIFS---RKKDGDTGSK 417
             + P WSP GR ++F+    + DG  G +
Sbjct: 494 RDREPRWSPDGRYVVFASAVMEADGRFGPR 523



 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 13/126 (10%)

Query: 260 ILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           + +P +S +G R A  ++ +   +D+Y +++     ERLT  L+ +   ++SPD   +VF
Sbjct: 401 LYSPTWSPDGARLAFSAIDEGGWIDLYVLEVSGGRLERLTRDLYDDRDPAWSPDGRYLVF 460

Query: 319 ESDREGKEQLYVMQSNGSD--QKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIG 374
            SDR      Y M     D    +I Q  +    D  P WSP G  +         FA  
Sbjct: 461 ASDRTAWGDRYGMNLFLYDFNTGQIHQLTDGWRRDREPRWSPDGRYVV--------FASA 512

Query: 375 VMKKDG 380
           VM+ DG
Sbjct: 513 VMEADG 518



 Score = 43.1 bits (100), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 6/99 (6%)

Query: 350 FDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFS 407
           + P WSP G  +AF+    G    + V++  G + ERL  +  + + P WSP GR L+F+
Sbjct: 402 YSPTWSPDGARLAFSAIDEGGWIDLYVLEVSGGRLERLTRDLYDDRDPAWSPDGRYLVFA 461

Query: 408 --RKKDGD-TGSKLYSIDLN-GRNETLINTPAYASDPQW 442
             R   GD  G  L+  D N G+   L +      +P+W
Sbjct: 462 SDRTAWGDRYGMNLFLYDFNTGQIHQLTDGWRRDREPRW 500


>gi|270294523|ref|ZP_06200725.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270275990|gb|EFA21850.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 1090

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 16/139 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD ++I F      K  +Y + + G    +++  +E+    P+WSP G  IAF      
Sbjct: 31  SPDGTEIAFCY----KGDIYKVPAKGGTATQLTT-QESYECTPIWSPDGKQIAFASDRYG 85

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSID------ 422
            F + VM  DG   + L   S  + P T++P G+ ++FS        S L+         
Sbjct: 86  NFDVFVMPADGGTAQRLTTHSTGEIPSTFTPDGKYILFSASIQDPASSALFPTSAMTELY 145

Query: 423 ----LNGRNETLINTPAYA 437
                 GR E ++ TPA A
Sbjct: 146 KVPATGGRTEQVLGTPAEA 164



 Score = 43.9 bits (102), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  +     +LT       +  +SPD  QI F SDR G   ++VM ++G   +R++
Sbjct: 44  DIYKVPAKGGTATQLTTQESYECTPIWSPDGKQIAFASDRYGNFDVFVMPADGGTAQRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
                      ++P G  I F+
Sbjct: 104 THSTGE-IPSTFTPDGKYILFS 124


>gi|289668062|ref|ZP_06489137.1| hypothetical protein XcampmN_06068 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 784

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 61/123 (49%), Gaps = 6/123 (4%)

Query: 305 ISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDL 360
           +S S+SPD   +VF S     G  +L  +       + +    +AS FD  P +SP G  
Sbjct: 329 LSFSWSPDGRALVFGSMTGTHGAARLRRLDLETGQWQTLDYSAQASDFDYAPRYSPDGHW 388

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           I F +         +  + G+ ERL  ++++++  +W P G  LIF R+ D +  ++LY 
Sbjct: 389 IVFVRNPQLGDLWRIPAQGGAAERLTHDNADIRGWSWLPDGSGLIFGRRVDSE--ARLYR 446

Query: 421 IDL 423
           +DL
Sbjct: 447 LDL 449



 Score = 45.1 bits (105), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 17/160 (10%)

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +++ S SPD + + + S   DR G   L     N   +   +    +S   P WSP G  
Sbjct: 233 DLTPSLSPDGAMVAYASLTGDRAGTSILVKTTDNAYPRVLETPAPGSSDRLPAWSPDGRE 292

Query: 361 IAFTKFSGEKFA----IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           IAF++ + +               ++E    + +++ + +WSP GR+L+F         +
Sbjct: 293 IAFSRQARDGVCRVMIAAATGPAAAREVARCDGADMLSFSWSPDGRALVFGSMTGTHGAA 352

Query: 417 KLYSIDL-NGRNETLINT---------PAYASDPQWVGFM 446
           +L  +DL  G+ +TL  +         P Y+ D  W+ F+
Sbjct: 353 RLRRLDLETGQWQTLDYSAQASDFDYAPRYSPDGHWIVFV 392


>gi|160891274|ref|ZP_02072277.1| hypothetical protein BACUNI_03723 [Bacteroides uniformis ATCC 8492]
 gi|317481149|ref|ZP_07940224.1| hypothetical protein HMPREF1007_03343 [Bacteroides sp. 4_1_36]
 gi|156859495|gb|EDO52926.1| hypothetical protein BACUNI_03723 [Bacteroides uniformis ATCC 8492]
 gi|316902645|gb|EFV24524.1| hypothetical protein HMPREF1007_03343 [Bacteroides sp. 4_1_36]
          Length = 1090

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 16/139 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD ++I F      K  +Y + + G    +++  +E+    P+WSP G  IAF      
Sbjct: 31  SPDGTEIAFCY----KGDIYKVPAKGGTATQLTT-QESYECTPIWSPDGKQIAFASDRYG 85

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSID------ 422
            F + VM  DG   + L   S  + P T++P G+ ++FS        S L+         
Sbjct: 86  NFDVFVMPADGGTAQRLTTHSTGEIPSTFTPDGKYILFSASIQDPASSALFPTSAMTELY 145

Query: 423 ----LNGRNETLINTPAYA 437
                 GR E ++ TPA A
Sbjct: 146 KVPATGGRTEQVLGTPAEA 164



 Score = 43.9 bits (102), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  +     +LT       +  +SPD  QI F SDR G   ++VM ++G   +R++
Sbjct: 44  DIYKVPAKGGTATQLTTQESYECTPIWSPDGKQIAFASDRYGNFDVFVMPADGGTAQRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
                      ++P G  I F+
Sbjct: 104 THSTGE-IPSTFTPDGKYILFS 124


>gi|60681997|ref|YP_212141.1| putative exported tricorn protease [Bacteroides fragilis NCTC 9343]
 gi|60493431|emb|CAH08217.1| putative exported tricorn protease [Bacteroides fragilis NCTC 9343]
          Length = 1077

 Score = 52.0 bits (123), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 25/162 (15%)

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RF ++NG   + S     A D+Y V       +RLT+ +   +   +SPD   I F    
Sbjct: 29  RFPATNGNEIVFSY----AGDLYKVPASGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQY 84

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFTK-----F 366
           +G  ++Y M + G +  RI      S+D       P      W+P G  I +       F
Sbjct: 85  DGNTEVYTMPATGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGF 144

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           SG+ F   V K+ G  E + + +      ++SP G+ L ++R
Sbjct: 145 SGKLFT--VDKEGGLSEVIPLPEGGFC--SYSPDGKQLAYNR 182



 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 73/153 (47%), Gaps = 12/153 (7%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVF 318
           + A   S +G R +++ + +    ++++ ++   T+ +T +   +   A +SPD +QI +
Sbjct: 317 VTAASLSPDGARMVVTSRGE----VFNLPVEKGVTKNITRSPGAHDRDAQWSPDGTQIAY 372

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD  G+ +LY+  + G +  +++   +    D  WSP    I +      K  + ++  
Sbjct: 373 ISDATGETELYLQNAAGGEPMQLTHKNDTYIRDFKWSPDSKKIVYMD---RKNRVNLLDV 429

Query: 379 DGSQERLLVEDSNLQAP---TWSPSGRSLIFSR 408
              +  LL++D  +  P   T+SP    L ++R
Sbjct: 430 ASGKVSLLLQDP-VGVPGGVTFSPDSEWLTYTR 461


>gi|312130125|ref|YP_003997465.1| peptidase s41 [Leadbetterella byssophila DSM 17132]
 gi|311906671|gb|ADQ17112.1| peptidase S41 [Leadbetterella byssophila DSM 17132]
          Length = 1081

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 18/215 (8%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI--LRVYLMDTRIDRAPKRIGNFRSM 259
           +I Y +    +I+FE        K+   +  D+ +  ++V ++    D  P++    R  
Sbjct: 254 DIHYPSLGNGEIIFE-----QGGKLHLYSIKDKTVKTVQVQILSDMSDYMPRQESVDR-Y 307

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVF 318
           I +   S +GKRAL S + D    ++S+  +      LTNT  I   +  YSP+   I F
Sbjct: 308 IQSVSLSYDGKRALFSARGD----VFSLPTKEGVARNLTNTSGIAERTPEYSPNGKNIAF 363

Query: 319 ESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGV 375
            SD  G+ +LY+      S +K+++       + P WSP    I F   +GE   F +  
Sbjct: 364 WSDESGEYELYLQSIEQPSTKKKLTSYGPGFKYTPYWSPDSKKICFIDQAGEIKVFDLST 423

Query: 376 MKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSR 408
                  + L+    N    +  WS   R + +SR
Sbjct: 424 QTTKKVDKLLIFSHGNTAGFSCEWSSDSRWIAYSR 458



 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 76/189 (40%), Gaps = 25/189 (13%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P+FS +GK    S   D   D+Y V +      RLT+  + +    ++ D  +++F S R
Sbjct: 67  PKFSPDGKEIAFSGNYDGNTDVYVVPVTGGTPRRLTSHGYQDRVVDWTVDGKEVIFASAR 126

Query: 323 EGKEQLY-----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---------- 367
              +Q Y     V +  G + K   +  E   F    SP G  +A    S          
Sbjct: 127 FSGKQRYNQFYKVKKEGGPESKLPLEYAEFGSF----SPDGSKMAVVYMSQVGRYWKRYK 182

Query: 368 -GEKFAIGVMK-KDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL- 423
            G K  I +   KD + +R+  +D    + P W  SG  L F   +  +    L+S D  
Sbjct: 183 GGTKGTIQIYDFKDNTSKRISPQDGGGDEFPMW--SGDVLYFLSDRGKEERMNLWSYDTK 240

Query: 424 NGRNETLIN 432
            G+ E L +
Sbjct: 241 TGKTEQLTH 249



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 12/131 (9%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D++ V       ++L++   +     +SPD  +I F  + +G   +YV+   G   +R
Sbjct: 41  ANDLWLVPKTGGQAQKLSSPPGVETYPKFSPDGKEIAFSGNYDGNTDVYVVPVTGGTPRR 100

Query: 341 ISQDKEASYFDPV--WSPQGDLIAF--TKFSGEKFA---IGVMKKDGSQERLLVEDSNLQ 393
           ++      Y D V  W+  G  + F   +FSG++       V K+ G + +L +E +   
Sbjct: 101 LTSH---GYQDRVVDWTVDGKEVIFASARFSGKQRYNQFYKVKKEGGPESKLPLEYAEFG 157

Query: 394 APTWSPSGRSL 404
             ++SP G  +
Sbjct: 158 --SFSPDGSKM 166


>gi|53713728|ref|YP_099720.1| putative protease [Bacteroides fragilis YCH46]
 gi|52216593|dbj|BAD49186.1| putative protease [Bacteroides fragilis YCH46]
          Length = 1077

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 25/162 (15%)

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RF ++NG   + S     A D+Y V       +RLT+ +   +   +SPD   I F    
Sbjct: 29  RFPATNGNEIVFSY----AGDLYKVPASGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQY 84

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFTK-----F 366
           +G  ++Y M + G +  RI      S+D       P      W+P G  I +       F
Sbjct: 85  DGNTEVYTMPATGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGF 144

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           SG+ F   V K+ G  E + + +      ++SP G+ L ++R
Sbjct: 145 SGKLFT--VDKEGGLSEVIPLPEGGFC--SYSPDGKQLAYNR 182



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 72/153 (47%), Gaps = 12/153 (7%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVF 318
           + A   S +G R +++ + +    ++++ ++   T+ +T +   +   A +SPD +QI +
Sbjct: 317 VTAASLSPDGARMVVTSRGE----VFNLPVEKGVTKNITRSPGAHDRDAQWSPDGTQIAY 372

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD  G+ +LY+  + G +  + +   +    D  WSP    I +      K  + ++  
Sbjct: 373 ISDATGETELYLQNAAGGEPMQFTHKNDTYIRDFKWSPDSKKIVYMD---RKNRVNLLDV 429

Query: 379 DGSQERLLVEDSNLQAP---TWSPSGRSLIFSR 408
              +  LL++D  +  P   T+SP    L ++R
Sbjct: 430 ASGKVSLLLQDP-VGVPGGVTFSPDSEWLTYTR 461


>gi|265764053|ref|ZP_06092621.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263256661|gb|EEZ28007.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 1077

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 25/162 (15%)

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RF ++NG   + S     A D+Y V       +RLT+ +   +   +SPD   I F    
Sbjct: 29  RFPATNGNEIVFSY----AGDLYKVPASGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQY 84

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFTK-----F 366
           +G  ++Y M + G +  RI      S+D       P      W+P G  I +       F
Sbjct: 85  DGNTEVYTMPATGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGF 144

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           SG+ F   V K+ G  E + + +      ++SP G+ L ++R
Sbjct: 145 SGKLFT--VDKEGGLSEVIPLPEGGFC--SYSPDGKQLAYNR 182



 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 72/153 (47%), Gaps = 12/153 (7%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVF 318
           + A   S +G R +++ + +    ++++ ++   T+ +T +   +   A +SPD +QI +
Sbjct: 317 VTAASLSPDGVRMVVTSRGE----VFNLPVEKGVTKNITRSPGAHDRDAQWSPDGTQIAY 372

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD  G+ +LY+  + G +  + +   +    D  WSP    I +      K  + ++  
Sbjct: 373 ISDATGETELYLQNAAGGEPMQFTHKNDTYIRDFKWSPDSKKIVYMD---RKNRVNLLDV 429

Query: 379 DGSQERLLVEDSNLQAP---TWSPSGRSLIFSR 408
              +  LL++D  +  P   T+SP    L ++R
Sbjct: 430 ASGKVSLLLQDP-VGVPGGVTFSPDSEWLTYTR 461


>gi|301163435|emb|CBW22986.1| putative exported tricorn protease [Bacteroides fragilis 638R]
          Length = 1077

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 25/162 (15%)

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RF ++NG   + S     A D+Y V       +RLT+ +   +   +SPD   I F    
Sbjct: 29  RFPATNGNEIVFSY----AGDLYKVPASGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQY 84

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFTK-----F 366
           +G  ++Y M + G +  RI      S+D       P      W+P G  I +       F
Sbjct: 85  DGNTEVYTMPATGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGF 144

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           SG+ F   V K+ G  E + + +      ++SP G+ L ++R
Sbjct: 145 SGKLFT--VDKEGGLSEVIPLPEGGFC--SYSPDGKQLAYNR 182



 Score = 43.1 bits (100), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 73/153 (47%), Gaps = 12/153 (7%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVF 318
           + A   S +G R +++ + +    ++++ ++   T+ +T +   +   A +SPD +QI +
Sbjct: 317 VTAASLSPDGVRMVVTSRGE----VFNLPVEKGVTKNITRSPGAHDRDAQWSPDGTQIAY 372

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD  G+ +LY+  + G +  +++   +    D  WSP    I +      K  + ++  
Sbjct: 373 ISDATGETELYLQNAAGGEPMQLTHKNDTYIRDFKWSPDSKKIVYMD---RKNRVNLLDV 429

Query: 379 DGSQERLLVEDSNLQAP---TWSPSGRSLIFSR 408
              +  LL++D  +  P   T+SP    L ++R
Sbjct: 430 ASGKVSLLLQDP-VGVPGGVTFSPDSEWLTYTR 461


>gi|145638707|ref|ZP_01794316.1| translocation protein TolB precursor [Haemophilus influenzae
           PittII]
 gi|145272302|gb|EDK12210.1| translocation protein TolB precursor [Haemophilus influenzae
           PittII]
          Length = 189

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 64/125 (51%), Gaps = 11/125 (8%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF--QDWNSLGAQVLVTGRVIKEGKD 122
           +S++V+ DL+ S  FN I+     Q   +P S+     + W+++G   +V G+V+  G +
Sbjct: 54  ISKIVADDLRNSGKFNPIAVSQMPQ---HPTSVAEVNPEAWSNIGIDAIVIGQVVPSG-N 109

Query: 123 RLRVEFRLWDVKDRKQIIGKKF----FSSPASW-RKIAHTISDDIYQSITGEKGDFNSRI 177
              + ++L D        G       ++    W R  AHT+SD++++ +T  +G F +RI
Sbjct: 110 GYSITYQLIDTVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRI 169

Query: 178 LFVSE 182
            +V +
Sbjct: 170 AYVVQ 174


>gi|295087746|emb|CBK69269.1| Periplasmic protease [Bacteroides xylanisolvens XB1A]
          Length = 1072

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 18/138 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD S+IVF      K  +Y + + G    +++   + SY  +PVWSP G  IAF     
Sbjct: 7   SPDGSEIVFCY----KGDIYKVPAQGGTAVQLTT--QTSYEANPVWSPDGKQIAFASDRN 60

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS---------KL 418
             F I +M  DG   R L   S  + P+ ++P G+ + FS        S         +L
Sbjct: 61  GNFDIFIMPADGGAARRLTYHSASEIPSAFTPDGKYVFFSASIQDPASSALFPTGAMTEL 120

Query: 419 YSIDL-NGRNETLINTPA 435
           Y + +  GR E ++ TPA
Sbjct: 121 YKVPVAGGRTEQVLGTPA 138



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  Q     +LT       +  +SPD  QI F SDR G   +++M ++G   +R++
Sbjct: 20  DIYKVPAQGGTAVQLTTQTSYEANPVWSPDGKQIAFASDRNGNFDIFIMPADGGAARRLT 79

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++P G  + F+
Sbjct: 80  Y-HSASEIPSAFTPDGKYVFFS 100


>gi|253565676|ref|ZP_04843131.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251945955|gb|EES86362.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 1077

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 25/162 (15%)

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RF ++NG   + S     A D+Y V       +RLT+ +   +   +SPD   I F    
Sbjct: 29  RFPATNGNEIVFSY----AGDLYKVPASGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQY 84

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFTK-----F 366
           +G  ++Y M + G +  RI      S+D       P      W+P G  I +       F
Sbjct: 85  DGNTEVYTMPATGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGF 144

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           SG+ F   V K+ G  E + + +      ++SP G+ L ++R
Sbjct: 145 SGKLFT--VDKEGGLSEVIPLPEGGFC--SYSPDGKQLAYNR 182



 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 33/153 (21%), Positives = 73/153 (47%), Gaps = 12/153 (7%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVF 318
           + A   S +G R +++ + +    ++++ ++   T+ +T +   +   A +SPD +QI +
Sbjct: 317 VTAASLSPDGARMVVTSRGE----VFNLPVEKGVTKNITRSPGAHDRDAQWSPDGTQIAY 372

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD  G+ +LY+  + G +  +++   +    D  WSP    I +      K  + ++  
Sbjct: 373 ISDATGETELYLQNAAGGEPMQLTHKNDTYIRDFKWSPDSKKIVYMD---RKNRVNLLDV 429

Query: 379 DGSQERLLVEDSNLQAP---TWSPSGRSLIFSR 408
              +  LL++D  +  P   T+SP    L ++R
Sbjct: 430 ASGKVSLLLQDP-VGVPGGVTFSPDSEWLTYTR 461


>gi|294141048|ref|YP_003557026.1| hypothetical protein SVI_2277 [Shewanella violacea DSS12]
 gi|293327517|dbj|BAJ02248.1| hypothetical protein [Shewanella violacea DSS12]
          Length = 703

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/271 (22%), Positives = 101/271 (37%), Gaps = 66/271 (24%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-------- 263
           ++ F    SP+ + +AY   D+     V L+D          GN ++ IL          
Sbjct: 261 EVDFSLAISPDSKTLAYVGSDNARQTSVKLLDLN--------GNEKTHILYKCQDDCLYE 312

Query: 264 ----RFSSNGKRALISVQKDEAM--DIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                FS +GK  +IS   DE    D++  D+     E+LTN+       ++ PD  +I+
Sbjct: 313 EVDVEFSPDGKHLVISRTLDEGFSEDLFLFDISKGELEQLTNSEGDIKGLAWHPDGDRII 372

Query: 318 FESDREGKEQLYVMQSNGSDQKRI-------------SQD-------------------- 344
           F ++  G    Y+      +  ++             SQD                    
Sbjct: 373 FSANVSGNRDGYIFSLKDKETTKLNIPGFSYPRFIPNSQDVIFHNWKELLSLSSLSLGGS 432

Query: 345 ----------KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQ 393
                      E SY  P +SP  + +AF       + I +   DG++  RL    S+L 
Sbjct: 433 LATSPFPLIQSEYSYHSPHYSPAINKLAFISNESGSYEIWMSNLDGTERTRLTSLSSHLT 492

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            P+WS  G+ + F   K     + LY +++N
Sbjct: 493 FPSWSHDGKYIAFLGPKTKSKINSLYVLNVN 523



 Score = 39.7 bits (91), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 10/143 (6%)

Query: 303 INISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQ 357
           ++ S + SPDS  + +  SD   +  + ++  NG+++  I      D      D  +SP 
Sbjct: 262 VDFSLAISPDSKTLAYVGSDNARQTSVKLLDLNGNEKTHILYKCQDDCLYEEVDVEFSPD 321

Query: 358 GDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           G  +  ++   E F+  +   D   G  E+L   + +++   W P G  +IFS    G+ 
Sbjct: 322 GKHLVISRTLDEGFSEDLFLFDISKGELEQLTNSEGDIKGLAWHPDGDRIIFSANVSGNR 381

Query: 415 GSKLYSIDLNGRNETLINTPAYA 437
              ++S  L  +  T +N P ++
Sbjct: 382 DGYIFS--LKDKETTKLNIPGFS 402


>gi|86159321|ref|YP_466106.1| WD-40-like beta propeller repeat-containing protein
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775832|gb|ABC82669.1| WD-40 repeat-containing protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 704

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 77/178 (43%), Gaps = 11/178 (6%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP    +G+R     ++     +  VD        +T+ L ++ + ++ PD + +   + 
Sbjct: 497 APAVRRDGRRIAFWTREGGRTRLRVVDADGTGGRVVTDALQLSGAPAWMPDGASLAVGAI 556

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDG 380
             G  +L+ +   G     +  +  A   DP WSP GDL AFT    G  F +  +  DG
Sbjct: 557 VNGAPRLFRVPLEGGAPAPLVAEPSA---DPAWSPAGDLFAFTGADVGTTFPLKAVNADG 613

Query: 381 SQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSIDL-NGRNETLINTP 434
           S  R+  L      +   + P GRS+   R   G+   K L ++DL +G +  LI  P
Sbjct: 614 SAHRMPPLTLTRGERHVAFLPGGRSIAVLR---GEIRRKHLAAVDLASGASRPLIVLP 668


>gi|297845140|ref|XP_002890451.1| hypothetical protein ARALYDRAFT_472405 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336293|gb|EFH66710.1| hypothetical protein ARALYDRAFT_472405 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 703

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 30/189 (15%)

Query: 282 MDIYSVDL----QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +DI ++++     S A ++LT T   N     SPD  +IVF S R G + LY+M +   +
Sbjct: 466 IDILAINVDAPNPSTAVKKLTTTGENNAFPWPSPDGKRIVFRSSRSGTKNLYIMDAEKGE 525

Query: 338 QKRISQDKEASYFDPV--WSPQGDLIAFT---KFSGEKFA-IGVMKKDGSQERLLVEDSN 391
              + +    ++ D +  WSP G+ I F    +F G     I V+  DG+  R L +  N
Sbjct: 526 SGGLFRLTNGNWNDTIATWSPDGNWIVFASNREFPGTLLMNIYVVHPDGTGLRKLAQ--N 583

Query: 392 LQA-----PTWSPSGRSLIFSRKKDGDTG------------SKLYSIDLNGRNET-LINT 433
           L       P +SP  + ++F+    G +             S++++++L+G   T L + 
Sbjct: 584 LTGGVSMHPMFSPDSKRIVFTTIYAGISAEQIGNPHFNVPSSEIFTVNLDGSGMTRLTHN 643

Query: 434 PAYASDPQW 442
                 P W
Sbjct: 644 SVEDGPPMW 652


>gi|262384205|ref|ZP_06077341.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295103|gb|EEY83035.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 1077

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 25/162 (15%)

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RF ++NG   + S     A D+Y V       +RLT+ +   +   +SPD   I F    
Sbjct: 29  RFPATNGSEIVFSY----AGDLYKVPATGGEAQRLTSYVGYEMFPRFSPDGKTIAFTGQY 84

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFTK-----F 366
           +G  ++Y M S+G +  RI      S+D       P      W+P G+ I +       F
Sbjct: 85  DGNTEVYTMPSSGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGNGIVYRNRISDGF 144

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           SG+ + +   K+ G  E + + +      ++SP G+ L ++R
Sbjct: 145 SGKLYTVN--KEGGLSEVIPLPEGGFC--SYSPDGKQLAYNR 182



 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 91/196 (46%), Gaps = 18/196 (9%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF 318
           I +   S  G+R +++ + +    ++++ +    T+ +T T   +   A +SPD   I +
Sbjct: 317 ITSASLSPKGERMVVTARGE----VFNIPVDKGVTKNITRTPGAHERDAQWSPDGKHIAY 372

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD  G+ +LY+  S G +  +++++ +       WSP    I +T        + V  K
Sbjct: 373 ISDATGETELYLQDSEGGEPIQLTKNNDTYIRTFQWSPDSKKIVYTDRKNRINLLDVSNK 432

Query: 379 DGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN---- 432
             +   + LL E  N+   ++SP    L +SR  D +  S +Y  D+ G+ E  +     
Sbjct: 433 QLTTISQSLLGEARNV---SFSPDNNWLTYSRVSDNNF-SIVYVYDIAGKKEYPVTDKWY 488

Query: 433 ---TPAYASDPQWVGF 445
              +P +++D +++ F
Sbjct: 489 ESYSPVFSTDGKYLVF 504


>gi|226225661|ref|YP_002759767.1| putative S9C family peptidase [Gemmatimonas aurantiaca T-27]
 gi|226088852|dbj|BAH37297.1| putative S9C family peptidase [Gemmatimonas aurantiaca T-27]
          Length = 691

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 77/198 (38%), Gaps = 62/198 (31%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-- 366
           +SPD +Q+VF SDREG  QL+ MQ      KR++           WSP G  IAFT    
Sbjct: 99  WSPDGTQLVFRSDREGGAQLWTMQVASGALKRLTSVARGP-LGAAWSPDGKQIAFTSLVP 157

Query: 367 -------------SGEKFAIG-------VMKKDGSQE------RLLVED----------- 389
                        +G  +A         + + DG+ E      +L V D           
Sbjct: 158 EPALSIAQQIAPPAGATWAPPARAFDKLIYRFDGAGELERGWSQLFVVDVASGTTRQLTK 217

Query: 390 ----------SNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSID-LNGRNETLI-- 431
                          P+WSP G++++ S  +  D     T +++ ++D ++G    L   
Sbjct: 218 GAYHVGGGNGRGSGVPSWSPDGKTILISANRRPDYEIESTDTEVMAVDVVSGDVRALTTR 277

Query: 432 ----NTPAYASDPQWVGF 445
               N P  + D QW+ F
Sbjct: 278 FGPDNRPMMSPDGQWIAF 295



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/284 (22%), Positives = 111/284 (39%), Gaps = 65/284 (22%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +L  ++ DG+  R L P  ++    PR+SP+  ++ + + D E   +++ M      A K
Sbjct: 74  TLWTVNADGSAHRQLLPGSNET--APRWSPDGTQLVFRS-DREGGAQLWTMQV-ASGALK 129

Query: 252 RIGNFRSMILAPRFSSNGKR-ALISVQKDEAMDI-------------------------- 284
           R+ +     L   +S +GK+ A  S+  + A+ I                          
Sbjct: 130 RLTSVARGPLGAAWSPDGKQIAFTSLVPEPALSIAQQIAPPAGATWAPPARAFDKLIYRF 189

Query: 285 -------------YSVDLQSNATERLTNTLF--------INISASYSPDSSQIVFESDRE 323
                        + VD+ S  T +LT   +         +   S+SPD   I+  ++R 
Sbjct: 190 DGAGELERGWSQLFVVDVASGTTRQLTKGAYHVGGGNGRGSGVPSWSPDGKTILISANRR 249

Query: 324 GKEQLYVMQSNGSDQKRISQDKEA--SYFDP----VWSPQGDLIAFTKFSGEKFA----- 372
              ++    +       +S D  A  + F P    + SP G  IAFT +   +       
Sbjct: 250 PDYEIESTDTEVMAVDVVSGDVRALTTRFGPDNRPMMSPDGQWIAFTGYDDRRLGYQNHE 309

Query: 373 IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDT 414
           + VM+ DGS  R L    D ++ +P W+P  R L      +G+T
Sbjct: 310 LYVMRADGSARRSLTASYDRSVGSPVWAPDSRGLYVELNNEGET 353



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +  DGS  R L+  SN  AP WSP G  L+F   ++G  G++L+++ +
Sbjct: 77  TVNADGSAHRQLLPGSNETAPRWSPDGTQLVFRSDREG--GAQLWTMQV 123


>gi|83945234|ref|ZP_00957583.1| putative exported tricorn protease [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851404|gb|EAP89260.1| putative exported tricorn protease [Oceanicaulis alexandrii
           HTCC2633]
          Length = 1093

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 13/213 (6%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           +IR++      ++FE      +  VA     +   +RV L       AP R  N  S I 
Sbjct: 261 DIRWMDSDGQTLVFEAGGRLKRYDVATGQVSE---IRVSLNADLPQLAP-RWENAASTIQ 316

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFES 320
           +   S  G+RALI+ + +    ++SV L   +T  +++T  +   +A +SPD +++ + +
Sbjct: 317 SAALSPTGQRALITARGE----VFSVPLDEGSTRNVSSTSGVREYTAIWSPDGNRVAYIT 372

Query: 321 DREGKEQLYVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           D  G +QL V+   G +  R   +   +++ YF   W+P+ + I +T      + + +  
Sbjct: 373 DAGGAQQLTVVDQRGFESPRTLSLGGAEDSFYFLQSWTPETNRIVYTDHLLNLYVLNLET 432

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              ++    V  S  +    SP GR L ++ ++
Sbjct: 433 GRSTRVATEVRRSGFETAV-SPDGRWLAYTLEQ 464


>gi|212634939|ref|YP_002311464.1| transcriptional regulator [Shewanella piezotolerans WP3]
 gi|212556423|gb|ACJ28877.1| Transcriptional regulatory protein [Shewanella piezotolerans WP3]
          Length = 699

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 13/145 (8%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVM----QSNGSDQKR 340
           S  L++   ER+TN   +   A+ SPD   + F+  RE  K Q+Y+     +S    Q  
Sbjct: 160 SSQLEALTVERITNFEGVEEQAAISPDGRFMAFQWRRELKKAQIYIKDLTDKSAPLRQVS 219

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLL----VEDSNLQAP 395
           +S+DKE S   P WSP G  +A+  F+   +  + V +   +Q+RL+         + + 
Sbjct: 220 MSEDKETS---PTWSPDGQALAYFSFNASGQCELHVRELITNQDRLIDTGCTSSGYVHSL 276

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYS 420
            WSP G+ L +++  +       YS
Sbjct: 277 DWSPDGKFLAYAKAGEASVAIYAYS 301


>gi|255015923|ref|ZP_05288049.1| putative exported tricorn protease [Bacteroides sp. 2_1_7]
          Length = 1077

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 25/162 (15%)

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RF ++NG   + S     A D+Y V       +RLT+ +   +   +SPD   I F    
Sbjct: 29  RFPATNGSEIVFSY----AGDLYKVQATGGEAQRLTSYVGYEMFPRFSPDGKTIAFTGQY 84

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFTK-----F 366
           +G  ++Y M S+G +  RI      S+D       P      W+P G+ I +       F
Sbjct: 85  DGNTEVYTMPSSGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGNGIVYRNRISDGF 144

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           SG+ + +   K+ G  E + + +      ++SP G+ L ++R
Sbjct: 145 SGKLYTVN--KEGGLSEVVPLPEGGFC--SYSPDGKQLAYNR 182



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 91/196 (46%), Gaps = 18/196 (9%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF 318
           I +   S  G+R +++ + +    ++++ +    T+ +T T   +   A +SPD   I +
Sbjct: 317 ITSASLSPKGERMVVTARGE----VFNIPVDKGVTKNITRTPGAHERDAQWSPDGKHIAY 372

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD  G+ +LY+  S G +  +++++ +       WSP    I +T        + V  K
Sbjct: 373 ISDATGETELYLQDSEGGEPTQLTKNNDTYIRTFQWSPDSKKIVYTDRKNRINLLDVSNK 432

Query: 379 DGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN---- 432
             +   + LL E  N+   ++SP    L +SR  D +  S +Y  D+ G+ E  +     
Sbjct: 433 QLTNISQSLLGEARNV---SFSPDNNWLTYSRVSDNNF-SIVYVYDIAGKKEYPVTDKWY 488

Query: 433 ---TPAYASDPQWVGF 445
              +P +++D +++ F
Sbjct: 489 ESYSPVFSTDGKYLVF 504


>gi|220917293|ref|YP_002492597.1| WD40 domain protein beta Propeller [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955147|gb|ACL65531.1| WD40 domain protein beta Propeller [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 1077

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 3/124 (2%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           + + AP  S +G+R    +Q+    D+     + +   R+T+   ++   +++PD   ++
Sbjct: 500 AQVFAPAPSPDGRRIAFELQEGGRRDL--ALWEDDEVRRITDDDALDTGPAWTPDGRYLL 557

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SDR G   LY  ++     ++++ + E   F P  SP G  I F  F  E + +  + 
Sbjct: 558 FASDRGGVYDLYAWEAATGAIRKVT-NVETGAFQPAVSPDGRTIGFVTFGREGYDVATIP 616

Query: 378 KDGS 381
            D S
Sbjct: 617 FDPS 620


>gi|89071212|ref|ZP_01158398.1| hypothetical protein OG2516_13911 [Oceanicola granulosus HTCC2516]
 gi|89043254|gb|EAR49482.1| hypothetical protein OG2516_13911 [Oceanicola granulosus HTCC2516]
          Length = 272

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/210 (20%), Positives = 83/210 (39%), Gaps = 24/210 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLM----DTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            SP+  ++A + +       VY +     T ++  P++   +        +S +G   + 
Sbjct: 70  LSPDGTRLAISDHSQHGKSSVYTLPVSGGTPVEVTPRQPSWWHG------WSPDGGAIVY 123

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQS 333
           +  +D       +       E    T F +     +S D + + F  +R+G   L+ ++ 
Sbjct: 124 AAARDGGPVAPYIAPLEGGEELCLATGFDHCDGPDFSADGAWVWFNGERDGSVDLWRVRP 183

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERL 385
           +G D +R++      +F P  SP G  + +  +         G   A+ +M +DG   R 
Sbjct: 184 DGRDLQRMTDGDSVDWF-PHPSPDGAHVVWLAYPPGTQGHPGGLDVALWLMPQDGGAGRE 242

Query: 386 LVE----DSNLQAPTWSPSGRSLIFSRKKD 411
           LV        +  P+W+P GR   F R  D
Sbjct: 243 LVRLHGGQGTINVPSWAPDGRRFAFVRYAD 272


>gi|325926634|ref|ZP_08187948.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas perforans 91-118]
 gi|325542986|gb|EGD14435.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas perforans 91-118]
          Length = 779

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 13/225 (5%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRA 272
             P  SP+  +VAYA+   +      L+ T  +  P+ +      +    P +S +G++ 
Sbjct: 229 LTPSLSPDGARVAYASLTRDRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGRQI 288

Query: 273 LISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQ 327
             S Q  +    + I +    + + E +       +S S+SPD   +VF S     G  +
Sbjct: 289 AFSRQAPDGSCRVMIAAATGPAASREVMRCDGADMLSFSWSPDGRALVFGSMTGTHGAAR 348

Query: 328 LYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +  +       + +    +A  FD  P +SP G+ I F +         +  + G  ERL
Sbjct: 349 MRRLDLATGQWQTLDYPAQAGDFDYAPRYSPDGNWIVFLRNPQLGDLWRIPAEGGVAERL 408

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             ++++++  +W P G  LIF R+ D +  ++LY +DL  R+ +L
Sbjct: 409 THDNADIRGWSWLPDGSGLIFGRRVDSE--ARLYRLDL--RDHSL 449



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 11/145 (7%)

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQG 358
           +++ S SPD +++ + S   DR G   L     N     R+ +       D  P WSP G
Sbjct: 228 DLTPSLSPDGARVAYASLTRDRTGTSILVKTTDNA--YPRVLETPAPGVSDRLPAWSPDG 285

Query: 359 DLIAFTK----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             IAF++     S             S+E +  + +++ + +WSP GR+L+F        
Sbjct: 286 RQIAFSRQAPDGSCRVMIAAATGPAASREVMRCDGADMLSFSWSPDGRALVFGSMTGTHG 345

Query: 415 GSKLYSIDLNGRNETLINTPAYASD 439
            +++  +DL       ++ PA A D
Sbjct: 346 AARMRRLDLATGQWQTLDYPAQAGD 370


>gi|221209643|ref|ZP_03582624.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Burkholderia multivorans CGD1]
 gi|221170331|gb|EEE02797.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Burkholderia multivorans CGD1]
          Length = 675

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 5/89 (5%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG----KEQLYVMQSN 334
           D  + ++++D Q+ A+ RLT   F    A +SPD  +I F   R+G    +  ++V+ ++
Sbjct: 171 DTEIHLHTIDAQTGASRRLTRGSFEVSEADWSPDGKRIAFTRTRDGRFAHRTDVWVVDAD 230

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           G + ++++    ++ F P WSP G  IA 
Sbjct: 231 GGNARQLTSTIASAAF-PRWSPDGRFIAL 258



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 17/217 (7%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR--AL 273
            PR+ P +Q +A+ + D     +++ + T    A + + +  S +++  +S +GK+  AL
Sbjct: 68  HPRWCPGEQALAFLS-DRGSGRQIHAIRTDGGEA-RCVTDLPSGVMSFEWSPDGKQLLAL 125

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            ++  D      + D    A +R  +   +     Y  D      ++    +  L+ + +
Sbjct: 126 CTISVDPEQRGNTQDDSDEAADRPADAPRVVWRLPYKLDGVGYTLDT----EIHLHTIDA 181

Query: 334 NGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDGSQERLLVE 388
                +R+++   E S  D  WSP G  IAFT+    +FA    + V+  DG   R L  
Sbjct: 182 QTGASRRLTRGSFEVSEAD--WSPDGKRIAFTRTRDGRFAHRTDVWVVDADGGNARQLTS 239

Query: 389 D-SNLQAPTWSPSGRSL-IFSRKKDGDTGSKLYSIDL 423
             ++   P WSP GR + +   + DGD    L+  D+
Sbjct: 240 TIASAAFPRWSPDGRFIALIGSEHDGDAQMHLWLHDV 276



 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 98/245 (40%), Gaps = 21/245 (8%)

Query: 210 RDQILFEPRFSPNQQKVAYATYD-DEDILRVYLMDTRID--RAPKRIGNFRSMILAPRFS 266
           RD +  + RF  +      +T D D D  R  L    +D  R P+++  F +    PR+ 
Sbjct: 14  RDIVDLQCRFEGDLAVCELSTPDRDADDYRSALWLVCVDGSRPPRQL-TFGNADSHPRWC 72

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----FESDR 322
              +       +     I+++         +T+     +S  +SPD  Q++       D 
Sbjct: 73  PGEQALAFLSDRGSGRQIHAIRTDGGEARCVTDLPSGVMSFEWSPDGKQLLALCTISVDP 132

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-P-QGDLIAFTKFSGEKFAIGVMKKDG 380
           E        + N  D    + D+ A     VW  P + D + +T    E     +  + G
Sbjct: 133 E-------QRGNTQDDSDEAADRPADAPRVVWRLPYKLDGVGYT-LDTEIHLHTIDAQTG 184

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK--LYSIDLNGRN-ETLINTPAYA 437
           +  RL      +    WSP G+ + F+R +DG    +  ++ +D +G N   L +T A A
Sbjct: 185 ASRRLTRGSFEVSEADWSPDGKRIAFTRTRDGRFAHRTDVWVVDADGGNARQLTSTIASA 244

Query: 438 SDPQW 442
           + P+W
Sbjct: 245 AFPRW 249


>gi|325915282|ref|ZP_08177602.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325538475|gb|EGD10151.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 781

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 11/222 (4%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRA 272
             P  SP+   VAYA+  ++      L+ T  +  P+ +      I    P +S +G+  
Sbjct: 231 LTPSLSPDGSMVAYASLTNDRPGTSILVKTTDNAYPRVLETPAPGISDRLPAWSPDGREI 290

Query: 273 LISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQ 327
             S Q  +    + I +   +S A E +       +S S+SPD   ++F S     G  +
Sbjct: 291 AFSRQAPDGSCRIMIAAAAGESAAREVVRCDGADMLSFSWSPDGRALLFGSMTGARGAPR 350

Query: 328 LYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +  +         +S + + + FD  P +SP G  I F +         +  + GS ERL
Sbjct: 351 IRRLDLETGQWHALSYNAQPADFDYAPRYSPDGQWIVFLRNPQLGDLWRIPAQGGSAERL 410

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             ++++++  +W P G SL+F R+ D +  ++LY +DL  R+
Sbjct: 411 THDNADIRGWSWLPDGSSLVFGRRVDSE--ARLYRLDLVDRS 450



 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 72/163 (44%), Gaps = 23/163 (14%)

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQG 358
           +++ S SPD S + + S   DR G   L     N     R+ +       D  P WSP G
Sbjct: 230 DLTPSLSPDGSMVAYASLTNDRPGTSILVKTTDNA--YPRVLETPAPGISDRLPAWSPDG 287

Query: 359 DLIAFTK----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS------- 407
             IAF++     S          +  ++E +  + +++ + +WSP GR+L+F        
Sbjct: 288 REIAFSRQAPDGSCRIMIAAAAGESAAREVVRCDGADMLSFSWSPDGRALLFGSMTGARG 347

Query: 408 ----RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
               R+ D +TG + +++  N +       P Y+ D QW+ F+
Sbjct: 348 APRIRRLDLETG-QWHALSYNAQPADFDYAPRYSPDGQWIVFL 389


>gi|284046037|ref|YP_003396377.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Conexibacter woesei DSM 14684]
 gi|283950258|gb|ADB53002.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Conexibacter woesei DSM 14684]
          Length = 305

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 18/167 (10%)

Query: 263 PRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           P FS +G + A  +        ++  DL      RLT       S ++S     I FE D
Sbjct: 131 PVFSPSGTQLAFDAGPSAGGQQLWISDLFGGGARRLTGR--GGRSPAWS-TRGTIAFERD 187

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                QLY ++ +GS  +R++     +   P WSP G  +AF +   +     VM  DGS
Sbjct: 188 ----GQLYAIRPDGSGLRRLTGRGGRA---PAWSPHGTKLAFVRRRADLLY--VMNADGS 238

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             R +     +++  WSP GR L++     G     + +I  +GR E
Sbjct: 239 GLRQVRGPRGVESVRWSPDGRRLVYEAFDAG-----VLTIGTDGRGE 280



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 17/185 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           L P+R      P FSP+  ++A+         ++++ D     A +  G       +P +
Sbjct: 120 LLPARGLNSGRPVFSPSGTQLAFDAGPSAGGQQLWISDLFGGGARRLTGRGGR---SPAW 176

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S+ G    I+ ++D    +Y++    +   RLT       + ++SP  +++ F   R   
Sbjct: 177 STRGT---IAFERDG--QLYAIRPDGSGLRRLTGR--GGRAPAWSPHGTKLAFVRRR--A 227

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + LYVM ++GS  +++   +        WSP G  + +  F      IG    DG  ER 
Sbjct: 228 DLLYVMNADGSGLRQVRGPRGVESVR--WSPDGRRLVYEAFDAGVLTIGT---DGRGERQ 282

Query: 386 LVEDS 390
           LV+D+
Sbjct: 283 LVQDA 287


>gi|261868863|gb|ACY02040.1| putative tricorn-like protease [Flammeovirga yaeyamensis]
          Length = 1080

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 24/156 (15%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NGK     ++ D    ++        T ++TNT     S S+SPD   +V+  +R+G 
Sbjct: 322 SPNGKEVAFILRGD----VFVTSTDYRTTVQITNTPEQERSVSFSPDGRSLVYAGERDGS 377

Query: 326 EQLYVMQSNGSD----------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             +Y  +    D          Q+ I   + A  F P WSP+GD IA+ +   E+  + V
Sbjct: 378 WNIYQAKLGNEDELYFINATDIQEEIVTAEPAEEFQPKWSPKGDAIAYLE---ERTTLKV 434

Query: 376 MKKDGSQERLLVEDS-------NLQAPTWSPSGRSL 404
           +  +   +++++  +         QA  WSP G+ L
Sbjct: 435 INLETKAKKVILPGTFNYSYSDGDQAFDWSPDGKYL 470



 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 16/139 (11%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S SPD + I F    +    +YV+ ++G + K I+    A  F PVW+P    IAF    
Sbjct: 29  SISPDGTHIAFAYQGD----VYVVPTSGGEAKAITT-HVAYDFSPVWAPDSKHIAFASDR 83

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGS---------K 417
              F + +   DG   + L  +S  + P +++P G+ ++++ +   D  S         +
Sbjct: 84  HGNFDLFLTTVDGGHPQRLTYNSTSEIPSSFTPDGKHVLYTAQILDDVKSAQFPYGRLGE 143

Query: 418 LYSIDLNG-RNETLINTPA 435
           LYS+ + G R E ++   A
Sbjct: 144 LYSVSVGGDRPEQVLTITA 162



 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 5/102 (4%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G     + Q D    +Y V       + +T  +  + S  ++PDS  I F SDR
Sbjct: 28  PSISPDGTHIAFAYQGD----VYVVPTSGGEAKAITTHVAYDFSPVWAPDSKHIAFASDR 83

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            G   L++   +G   +R++ +   S     ++P G  + +T
Sbjct: 84  HGNFDLFLTTVDGGHPQRLTYN-STSEIPSSFTPDGKHVLYT 124


>gi|256841886|ref|ZP_05547392.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256736780|gb|EEU50108.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 1079

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 25/162 (15%)

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RF ++NG   + S     A D+Y V       +RLT+ +   +   +SPD   I F    
Sbjct: 31  RFPATNGSEIVFSY----AGDLYKVPATGGEAQRLTSYVGYEMFPRFSPDGKTIAFTGQY 86

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFTK-----F 366
           +G  ++Y M S+G +  RI      S+D       P      W+P G+ I +       F
Sbjct: 87  DGNTEVYTMPSSGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGNGIVYRNRISDGF 146

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           SG+ + +   K+ G  E + + +      ++SP G+ L ++R
Sbjct: 147 SGKLYTVN--KEGGLSEVVPLPEGGFC--SYSPDGKQLAYNR 184



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 91/196 (46%), Gaps = 18/196 (9%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF 318
           I +   S  G+R +++ + +    ++++ +    T+ +T T   +   A +SPD   I +
Sbjct: 319 ITSASLSPKGERMVVTARGE----VFNIPVDKGVTKNITRTPGAHERDAQWSPDGKHIAY 374

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD  G+ +LY+  S G +  +++++ +       WSP    I +T        + V  K
Sbjct: 375 ISDATGETELYLQDSEGGEPTQLTKNNDTYIRTFQWSPDSKKIVYTDRKNRINLLDVSNK 434

Query: 379 DGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN---- 432
             +   + LL E  N+   ++SP    L +SR  D +  S +Y  D+ G+ E  +     
Sbjct: 435 QLTTISQSLLGEARNV---SFSPDNNWLTYSRVSDNNF-SIVYVYDIAGKKEYPVTDKWY 490

Query: 433 ---TPAYASDPQWVGF 445
              +P +++D +++ F
Sbjct: 491 ESYSPVFSTDGKYLVF 506


>gi|156742759|ref|YP_001432888.1| peptidase S41 [Roseiflexus castenholzii DSM 13941]
 gi|156234087|gb|ABU58870.1| peptidase S41 [Roseiflexus castenholzii DSM 13941]
          Length = 1117

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 15/175 (8%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+++V        RLT       S + SPD + + F    EG  +++VM + G + +R++
Sbjct: 24  DLWTVPASGGVARRLTANPGSVQSPALSPDGALLAFVGRDEGPGEVFVMPAEGGEARRLT 83

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDGSQERLLVEDSNLQAPTWS 398
               A+     W   G  I F   +   F+    +  ++ DG + RLL     +   ++ 
Sbjct: 84  F-LGATMRVCGWGRNGREILFASSASLPFSRMALLYAIRADGGEPRLLPTGPAVTI-SYG 141

Query: 399 PSGRSLI---------FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           P+G ++I         + R + G TG      D  G    LI  P   + P WVG
Sbjct: 142 PTGGAVIGRNESDPARWKRYRGGRTGDVWIDPDGTGEWRRLIALPGNIAIPLWVG 196


>gi|298376894|ref|ZP_06986848.1| exported tricorn protease [Bacteroides sp. 3_1_19]
 gi|298265878|gb|EFI07537.1| exported tricorn protease [Bacteroides sp. 3_1_19]
          Length = 1077

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 25/162 (15%)

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RF ++NG   + S     A D+Y V       +RLT+ +   +   +SPD   I F    
Sbjct: 29  RFPATNGSEIVFSY----AGDLYKVPATGGEAQRLTSYVGYEMFPRFSPDGKTIAFTGQY 84

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFTK-----F 366
           +G  ++Y M S+G +  RI      S+D       P      W+P G+ I +       F
Sbjct: 85  DGNTEVYTMPSSGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGNGIVYRNRISDGF 144

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           SG+ + +   K+ G  E + + +      ++SP G+ L ++R
Sbjct: 145 SGKLYTVN--KEGGLSEVVPLPEGGFC--SYSPDGKQLAYNR 182



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 91/196 (46%), Gaps = 18/196 (9%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF 318
           I +   S  G+R +++ + +    ++++ +    T+ +T T   +   A +SPD   I +
Sbjct: 317 ITSASLSPKGERMVVTARGE----VFNIPVDKGVTKNITRTPGAHERDAQWSPDGKHIAY 372

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD  G+ +LY+  S G +  +++++ +       WSP    I +T        + V  K
Sbjct: 373 ISDATGETELYLQDSEGGEPTQLTKNNDTYIRTFQWSPDSKKIVYTDRKNRINLLDVSNK 432

Query: 379 DGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN---- 432
             +   + LL E  N+   ++SP    L +SR  D +  S +Y  D+ G+ E  +     
Sbjct: 433 QLTTISQSLLGEARNV---SFSPDNNWLTYSRVSDNNF-SIVYVYDIAGKKEYPVTDKWY 488

Query: 433 ---TPAYASDPQWVGF 445
              +P +++D +++ F
Sbjct: 489 ESYSPVFSTDGKYLVF 504


>gi|150009318|ref|YP_001304061.1| putative exported tricorn protease [Parabacteroides distasonis ATCC
           8503]
 gi|301311118|ref|ZP_07217047.1| putative exported tricorn protease [Bacteroides sp. 20_3]
 gi|149937742|gb|ABR44439.1| putative exported tricorn protease [Parabacteroides distasonis ATCC
           8503]
 gi|300831181|gb|EFK61822.1| putative exported tricorn protease [Bacteroides sp. 20_3]
          Length = 1077

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 25/162 (15%)

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RF ++NG   + S     A D+Y V       +RLT+ +   +   +SPD   I F    
Sbjct: 29  RFPATNGSEIVFSY----AGDLYKVPATGGEAQRLTSYVGYEMFPRFSPDGKTIAFTGQY 84

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFTK-----F 366
           +G  ++Y M S+G +  RI      S+D       P      W+P G+ I +       F
Sbjct: 85  DGNTEVYTMPSSGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGNGIVYRNRISDGF 144

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           SG+ + +   K+ G  E + + +      ++SP G+ L ++R
Sbjct: 145 SGKLYTVN--KEGGLSEVVPLPEGGFC--SYSPDGKQLAYNR 182



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 91/196 (46%), Gaps = 18/196 (9%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF 318
           I +   S  G+R +++ + +    ++++ +    T+ +T T   +   A +SPD   I +
Sbjct: 317 ITSASLSPKGERMVVTARGE----VFNIPVDKGVTKNITRTPGAHERDAQWSPDGKHIAY 372

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD  G+ +LY+  S G +  +++++ +       WSP    I +T        + V  K
Sbjct: 373 ISDATGETELYLQDSEGGEPTQLTKNNDTYIRTFQWSPDSKKIVYTDRKNRINLLDVSNK 432

Query: 379 DGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN---- 432
             +   + LL E  N+   ++SP    L +SR  D +  S +Y  D+ G+ E  +     
Sbjct: 433 QLTTISQSLLGEARNV---SFSPDNNWLTYSRVSDNNF-SIVYVYDIAGKKEYPVTDKWY 488

Query: 433 ---TPAYASDPQWVGF 445
              +P +++D +++ F
Sbjct: 489 ESYSPVFSTDGKYLVF 504


>gi|73670805|ref|YP_306820.1| hypothetical protein Mbar_A3367 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397967|gb|AAZ72240.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 557

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 12/140 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQL--YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S SPD  +I+F +       L  YV   +GS+ K      E  + +  W P G L+    
Sbjct: 252 SLSPDRKKIMFAAGSSDSYNLQTYVSNIDGSNLKGNISYNENLWANESWQPNGSLL---- 307

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              +   + +++ D + +RLL +  N     W P G+ ++F      + G+KLYSID++G
Sbjct: 308 LVNQNRNLYIVEGDENNKRLLYK-GNASESQWFPDGKKILFV-----ENGNKLYSIDIDG 361

Query: 426 RNETLINTPAYASDPQWVGF 445
            N T I      S   W  F
Sbjct: 362 TNITFITNFGQTSSNTWKYF 381


>gi|268316601|ref|YP_003290320.1| WD40 domain-containing protein [Rhodothermus marinus DSM 4252]
 gi|262334135|gb|ACY47932.1| WD40 domain-containing protein [Rhodothermus marinus DSM 4252]
          Length = 379

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 91/213 (42%), Gaps = 29/213 (13%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           + +  +  YD  DI   Y+ DT     P+ +            S +G+  + +  +   +
Sbjct: 142 EGRYVWPVYDTYDI---YITDT-TGAEPELLIGGPGYDAEATVSPDGRYVVFTSSRTGDL 197

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--------------- 327
           +++  DLQ+    +LT+ L  +  A +SPD S+IV+ + R   E                
Sbjct: 198 ELWRYDLQTGELLQLTHELGYDGGAFFSPDGSKIVWRASRPTGEAAERYRRLLAQGLVEP 257

Query: 328 ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKKD 379
               L+V  ++GS+ +R+ Q    S + P + P G+ I F        G  F + +++ D
Sbjct: 258 TDMDLFVADADGSNPRRVIQ-LPGSQWAPYFHPDGERIIFASNHHTEGGRLFDLFLIRLD 316

Query: 380 GSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKD 411
           G+    +       A P +S  G+ L+F+  ++
Sbjct: 317 GTGLEQITHSGTFDAFPMFSRDGKRLVFASNRN 349


>gi|294627159|ref|ZP_06705747.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598592|gb|EFF42741.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 779

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 7/143 (4%)

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +++ S SPD + + + S   DR G   L     N   +   +     S   P WSP G  
Sbjct: 228 DLTPSLSPDGAMVAYASLTRDRAGTSILVKTTDNAYPRVLETPGPGVSDRLPAWSPDGRQ 287

Query: 361 IAFTKFS--GEKFAI--GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           IAF++ +  G  + +         S+E +  + +++ + +WSP GR+L+F         +
Sbjct: 288 IAFSRQAPDGSCWVMIAAATGPAASREVVRCDGADMLSFSWSPDGRALVFGSMTGTHGAA 347

Query: 417 KLYSIDLNGRNETLINTPAYASD 439
           ++  +DL  R    ++ PA A D
Sbjct: 348 RMRRLDLATRQWQALDYPAQAGD 370



 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 13/225 (5%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRA 272
             P  SP+   VAYA+   +      L+ T  +  P+ +      +    P +S +G++ 
Sbjct: 229 LTPSLSPDGAMVAYASLTRDRAGTSILVKTTDNAYPRVLETPGPGVSDRLPAWSPDGRQI 288

Query: 273 LISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQ 327
             S Q  +    + I +    + + E +       +S S+SPD   +VF S     G  +
Sbjct: 289 AFSRQAPDGSCWVMIAAATGPAASREVVRCDGADMLSFSWSPDGRALVFGSMTGTHGAAR 348

Query: 328 LYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +  +       + +    +A  FD  P +SP G+ I F +         +  + G  ERL
Sbjct: 349 MRRLDLATRQWQALDYPAQAGDFDYAPRYSPDGNWIVFLRNPQLGDLWRIPAEGGVAERL 408

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             ++++++  +W P G  LIF R+ D +  ++LY +DL  R+ +L
Sbjct: 409 THDNADIRGWSWLPDGSGLIFGRRVDSE--ARLYRLDL--RDHSL 449


>gi|116622819|ref|YP_824975.1| peptidase S41 [Candidatus Solibacter usitatus Ellin6076]
 gi|116225981|gb|ABJ84690.1| peptidase S41 [Candidatus Solibacter usitatus Ellin6076]
          Length = 1137

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 7/101 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREG 324
           S  G RA+     +    I +V         LTNT   ++ S ++SPD   I + SD  G
Sbjct: 319 SPTGVRAVFEGHGE----ILTVPADKGEVRNLTNTPGVMDRSPAWSPDGKTIAYFSDESG 374

Query: 325 KEQLYVMQSNGSDQ-KRIS-QDKEASYFDPVWSPQGDLIAF 363
           +  L++   NG+ + K+I+   K A YFDP WSP    IAF
Sbjct: 375 EYALHIKAQNGAGETKKIALAGKSAFYFDPKWSPDSKAIAF 415



 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 88/191 (46%), Gaps = 34/191 (17%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-----ASYSPDSSQIVFESDREGKEQL 328
           I+  K+ A++I   D+ ++ TE      F N++     ++ SP   + VFE    G  ++
Sbjct: 283 IASGKEHAVNI---DIAADLTE--VRPHFQNVARELRNSAISPTGVRAVFE----GHGEI 333

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGVMKKDGSQERLLV 387
             + ++  + + ++         P WSP G  IA F+  SGE +A+ +  ++G+ E   +
Sbjct: 334 LTVPADKGEVRNLTNTPGVMDRSPAWSPDGKTIAYFSDESGE-YALHIKAQNGAGETKKI 392

Query: 388 EDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-------- 435
             +   A    P WSP  +++ F+  +D      L+++++     T ++T          
Sbjct: 393 ALAGKSAFYFDPKWSPDSKAIAFNDNQD-----NLWTVEVASGKLTKVDTNYLYDLNRGF 447

Query: 436 -YASDPQWVGF 445
            ++ D +W+ F
Sbjct: 448 NWSGDSKWIAF 458



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 10/116 (8%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           +FS +GK    + + D  +D+++V +     +R+T     +    +S D S+IVF S+R 
Sbjct: 69  KFSPDGKTLAFTGEYDGNVDVFTVPVAGGVPKRVTYHPDGDRVVGWSADGSRIVFRSNRL 128

Query: 324 GKE---QLYVMQSNGS--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +    QLY + + G   D   +      +Y     SP G  + +    G +FA G
Sbjct: 129 SQSRYTQLYTVAAEGGLPDVLPLPLACMGAY-----SPDGKRMVYAPLDGGQFAPG 179


>gi|116622793|ref|YP_824949.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225955|gb|ABJ84664.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 885

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/186 (19%), Positives = 77/186 (41%), Gaps = 7/186 (3%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  + +G+R + +   D+  D+  + L   A   L        S ++SPD  Q+++ +DR
Sbjct: 575 PSLAPDGRRLVFTSVTDD-FDLIELPLDGTAPRTLLANSRNMYSPAWSPDGDQLLYATDR 633

Query: 323 EGKEQLYVMQSNGSDQKRISQDKE------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            G  +++      S  + +   ++       +   PV+SP G   AF +++ ++ A   +
Sbjct: 634 SGASEIWSRNVKASIDRPMVTARDFPPGTTTALTHPVFSPDGSRFAFVRYATDQPATIWV 693

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           +       + +    + +PTWSP G S+     +D      +  +  N     + + P  
Sbjct: 694 EPTVGGAPIRMASEYMVSPTWSPDGNSIAGLMHRDRPWQPAIVEVGANMSPHVIASAPTC 753

Query: 437 ASDPQW 442
               +W
Sbjct: 754 LMPMEW 759



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 15/201 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR--IDRAP 250
           L  +  DG   R L  +  + ++ P +SP+  ++ YAT D      ++  + +  IDR  
Sbjct: 595 LIELPLDGTAPRTLL-ANSRNMYSPAWSPDGDQLLYAT-DRSGASEIWSRNVKASIDRPM 652

Query: 251 KRIGNF----RSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
               +F     + +  P FS +G R A +    D+   I+       A  R+ +   +  
Sbjct: 653 VTARDFPPGTTTALTHPVFSPDGSRFAFVRYATDQPATIWVEPTVGGAPIRMASEYMV-- 710

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++SPD + I     R+   Q  +++   +    +            WSP G+ +A   
Sbjct: 711 SPTWSPDGNSIAGLMHRDRPWQPAIVEVGANMSPHVIASAPTCLMPMEWSPTGEWLACEA 770

Query: 366 FSGEKFAIGVMKKDGSQERLL 386
            +G    I +  +DG++ R L
Sbjct: 771 RTG----IELFSRDGARRRTL 787



 Score = 41.2 bits (95), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 13/164 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDL--QSNATERL---TNTLFINISASYSPDSSQIVF 318
            FS +GK  L+ V    A  ++ +     S A  R+   TN  F+   A + PDS   V 
Sbjct: 484 HFSPDGKSILL-VASGIAPQVWVLPFPASSGAPRRVFSATNFNFVPRGA-WMPDSRHAVL 541

Query: 319 ESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                G +  L+         ++++    A  F P  +P G  + FT  + + F +  + 
Sbjct: 542 SFSTGGAQPALWFADLEREKLRKLTASTAAEEF-PSLAPDGRRLVFTSVT-DDFDLIELP 599

Query: 378 KDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            DG+  R L+ +S N+ +P WSP G  L+++  + G   S+++S
Sbjct: 600 LDGTAPRTLLANSRNMYSPAWSPDGDQLLYATDRSG--ASEIWS 641


>gi|309791760|ref|ZP_07686249.1| WD40 domain-containing protein [Oscillochloris trichoides DG6]
 gi|308226203|gb|EFO79942.1| WD40 domain-containing protein [Oscillochloris trichoides DG6]
          Length = 322

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 50/235 (21%), Positives = 96/235 (40%), Gaps = 27/235 (11%)

Query: 215 FEPRFSPNQQKVAYATYDDE--DILRV--------YLMDTRIDRAPKRIGNFRSMILA-- 262
           ++P  +P+ +++AY   D+   D+L           L      + P  +        A  
Sbjct: 58  WQPALAPDGRRIAYVRRDNSFSDVLLADASGAPLGQLTTNGSRQPPNSLARVYESTWAFY 117

Query: 263 PRFSSNGKRALISVQK---------DEAMDIYSVDLQSNATERLTNTLFINISAS-YSPD 312
           P ++  G R +++ Q          D  + ++ + +       L     + +  S Y PD
Sbjct: 118 PTWAPTGDRLVVTGQAVPPSGDPPVDANLGLFELSVAGGYQPMLYAAPNVQVGRSLYLPD 177

Query: 313 SSQIVF---ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             +++F    +  +G++QLY++  +    +  +     SY DP  SP G  +AF    G+
Sbjct: 178 GQRLLFVRSPNSADGQQQLYLLDLDTGAAEPFAAAPSPSY-DPAISPDGRWLAFAAQDGD 236

Query: 370 KFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +  +   G    L + D  + +AP +SP GR + F     G+ G  L+  DL
Sbjct: 237 GTDLFALPLAGGGTPLRLSDIGSARAPAFSPDGRQIAFLAIAPGEGGFDLWVADL 291


>gi|256821999|ref|YP_003145962.1| transcriptional regulator CadC [Kangiella koreensis DSM 16069]
 gi|256795538|gb|ACV26194.1| transcriptional regulator, CadC [Kangiella koreensis DSM 16069]
          Length = 741

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 68/128 (53%), Gaps = 9/128 (7%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A Y+  S +IVF S R G+ Q+++  +NG++Q+  S ++        WSP  + + F   
Sbjct: 491 AEYANTSDRIVFVSRRTGEPQIWLKNTNGTEQQLTSFERNFDIRRIRWSPDDESLLFIH- 549

Query: 367 SGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              KF +  +  +  + ++L E     +++  +W+ +GRS++FS  +DGD   ++Y + L
Sbjct: 550 --NKF-LYQLSLNNMELKVLYEAQGGESIEGESWTVNGRSVLFSSDRDGDW--QVYKLSL 604

Query: 424 NGRNETLI 431
              N+  I
Sbjct: 605 QSENDKAI 612


>gi|317128020|ref|YP_004094302.1| WD40-like beta Propeller containing protein [Bacillus
           cellulosilyticus DSM 2522]
 gi|315472968|gb|ADU29571.1| WD40-like beta Propeller containing protein [Bacillus
           cellulosilyticus DSM 2522]
          Length = 666

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/242 (21%), Positives = 100/242 (41%), Gaps = 60/242 (24%)

Query: 263 PRFSSNGKRA---LISVQKDE---AMDIYSVDLQSNATERLTN-----TLFINISASYSP 311
           P+ S N  +A   L  V K++     +IY  DL+    +  ++      L ++ +  +SP
Sbjct: 20  PQVSPNKDKAAYVLTHVDKEKDGYYSNIYVTDLKGPGRQFTSHYAKEDKLVVDAAPKWSP 79

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG------------- 358
           D S + F S+R GK Q+Y++ ++G +  +++  K+    D  WSP G             
Sbjct: 80  DGSSLAFRSNRTGKNQVYLLHTDGGEAIQLTDVKQGV-GDYDWSPDGSKLVLTIRGEFKL 138

Query: 359 -------------DLIAFTKFSGEKFAIGVMKKDGSQ-----------ERLLVEDSNLQA 394
                        D+   T+   +    G+   D +             ++   D +   
Sbjct: 139 STDKDEEKKEEKSDVKVITRLRYKGDGAGIYNDDRTHVYLFDVNTKEYTKVTEGDHDFGQ 198

Query: 395 PTWSPSGRSLIF--SRKKDGDTG--SKLYSIDLNGRNETL-------INTPAYASDPQWV 443
           P +SP G SLI+  ++ +D + G    ++  D+  + E L       I  P+++ D +W+
Sbjct: 199 PRFSPDGASLIYIGTKAEDKEWGYLPAIWKYDIEKKEEALFYQGNGYIYAPSFSPDGKWL 258

Query: 444 GF 445
            F
Sbjct: 259 AF 260


>gi|226312267|ref|YP_002772161.1| peptidase [Brevibacillus brevis NBRC 100599]
 gi|226095215|dbj|BAH43657.1| putative peptidase [Brevibacillus brevis NBRC 100599]
          Length = 671

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 3/66 (4%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-- 366
           +SPD S+I F S+R GK Q++++ +NG + +++++ K     +P WSP G  I F+    
Sbjct: 72  WSPDGSKISFVSNRSGKPQIWLIDANGGEARQLTRCKNGVS-NPTWSPDGKYIVFSSILD 130

Query: 367 SGEKFA 372
            GE FA
Sbjct: 131 EGETFA 136



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 8/104 (7%)

Query: 310 SPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           SPD   + +     +     +  LY+ + +  D   ++     +Y  P WSP G  I+F 
Sbjct: 25  SPDGKTLAYVENQIDESHAYQNHLYLRKLDVDDPLPLTSGSRDTY--PRWSPDGSKISFV 82

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFS 407
                K  I ++  +G + R L    N +  PTWSP G+ ++FS
Sbjct: 83  SNRSGKPQIWLIDANGGEARQLTRCKNGVSNPTWSPDGKYIVFS 126



 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 43/197 (21%), Positives = 87/197 (44%), Gaps = 17/197 (8%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PR+SP+  K+++ + +     +++L+D     A +++   ++ +  P +S +GK  + S 
Sbjct: 70  PRWSPDGSKISFVS-NRSGKPQIWLIDANGGEA-RQLTRCKNGVSNPTWSPDGKYIVFSS 127

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             DE       DL++   +     + +     Y  D    ++E ++    QL ++     
Sbjct: 128 ILDEGETF--ADLEAAEEKEKAKAIHVG-RMKYKSDDLGFIYEKNK----QLAIVHVETG 180

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGV----MKKDGSQERLLVEDS 390
           +   +S D   ++    WSP G  +A T    E   F  G+    +  +G + + L    
Sbjct: 181 EVTPLS-DGPYNHTIGSWSPDGKWLAVTANRSEDPDFQHGIDVFIIPSEGGEWKKLTNSK 239

Query: 391 NLQA-PTWSPSGRSLIF 406
            + A PTWSP G+ L +
Sbjct: 240 GIFAYPTWSPDGKKLAY 256


>gi|299146617|ref|ZP_07039685.1| MdsD protein [Bacteroides sp. 3_1_23]
 gi|298517108|gb|EFI40989.1| MdsD protein [Bacteroides sp. 3_1_23]
          Length = 1119

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 18/141 (12%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
           A  SPD S+IVF      K  +Y + + G    +++   + SY  +PVWSP G  IAF  
Sbjct: 28  ARISPDGSEIVFCY----KGDIYKVPAQGGTAVQLTT--QTSYEANPVWSPDGKQIAFAS 81

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS-------- 416
                F + +M  DG   R L   S  + P+ ++P G+ + FS        S        
Sbjct: 82  DRNGNFDLFIMPADGGAARRLTYHSASEIPSAFTPDGKYVFFSASIQDPASSALFPTGAM 141

Query: 417 -KLYSIDL-NGRNETLINTPA 435
            +LY + +  GR E ++ TPA
Sbjct: 142 TELYKVPVAGGRTEQVLGTPA 162



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  Q     +LT       +  +SPD  QI F SDR G   L++M ++G   +R++
Sbjct: 44  DIYKVPAQGGTAVQLTTQTSYEANPVWSPDGKQIAFASDRNGNFDLFIMPADGGAARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++P G  + F+
Sbjct: 104 Y-HSASEIPSAFTPDGKYVFFS 124


>gi|160882853|ref|ZP_02063856.1| hypothetical protein BACOVA_00815 [Bacteroides ovatus ATCC 8483]
 gi|156111717|gb|EDO13462.1| hypothetical protein BACOVA_00815 [Bacteroides ovatus ATCC 8483]
          Length = 1119

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 18/141 (12%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
           A  SPD S+IVF      K  +Y + + G    +++   + SY  +PVWSP G  IAF  
Sbjct: 28  ARISPDGSEIVFCY----KGDIYKVPAQGGTAVQLTT--QTSYEANPVWSPDGKQIAFAS 81

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS-------- 416
                F + +M  DG   R L   S  + P+ ++P G+ + FS        S        
Sbjct: 82  DRNGNFDLFIMPADGGAARRLTYHSASEIPSAFTPDGKYVFFSASIQDPASSALFPTGAM 141

Query: 417 -KLYSIDL-NGRNETLINTPA 435
            +LY + +  GR E ++ TPA
Sbjct: 142 TELYKVPVAGGRTEQVLGTPA 162



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  Q     +LT       +  +SPD  QI F SDR G   L++M ++G   +R++
Sbjct: 44  DIYKVPAQGGTAVQLTTQTSYEANPVWSPDGKQIAFASDRNGNFDLFIMPADGGAARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++P G  + F+
Sbjct: 104 Y-HSASEIPSAFTPDGKYVFFS 124


>gi|57505319|ref|ZP_00371248.1| colicin tolerance-like protein (tolB) [Campylobacter upsaliensis
           RM3195]
 gi|315639284|ref|ZP_07894446.1| colicin tolerance family protein (tolB) [Campylobacter upsaliensis
           JV21]
 gi|57016455|gb|EAL53240.1| colicin tolerance-like protein (tolB) [Campylobacter upsaliensis
           RM3195]
 gi|315480610|gb|EFU71252.1| colicin tolerance family protein (tolB) [Campylobacter upsaliensis
           JV21]
          Length = 402

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 3/121 (2%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P+++  +Q + Y T  D D   ++  D   ++A K + +   M++A   +  G + L+++
Sbjct: 178 PKWANEEQTMFYYTAYDHDKPTLFRFDLTNNKASKILSS-GGMVVASDVNKKGDKILVTM 236

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNG 335
              +  D+Y  DL S    +LTN   I+++A++   D S++VF SDR G   +++ Q+ G
Sbjct: 237 APQDQPDVYLYDLNSKNLSKLTNYSGIDVNANFIGEDESKVVFVSDRLGYPNIFI-QNLG 295

Query: 336 S 336
           S
Sbjct: 296 S 296


>gi|312198255|ref|YP_004018316.1| serine/threonine protein kinase [Frankia sp. EuI1c]
 gi|311229591|gb|ADP82446.1| serine/threonine protein kinase [Frankia sp. EuI1c]
          Length = 698

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 84/202 (41%), Gaps = 19/202 (9%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           +   +  +  DG + R L  S D     P +SP+  ++AY      +   +YLM      
Sbjct: 494 VGGQIVTVRPDGTDARQLATSGDSSAEYPAWSPDGTQIAYF----RNTGGLYLMQADGTG 549

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISA 307
           A +R+ +   +  A  +S +G+  +      + + I S+ D    A     +   I +  
Sbjct: 550 A-RRVASVHGLETA--WSPDGREIVFRDPDSQTLKIVSMADGSVRALTGAPHDGAIPVEP 606

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SPD   IVF SD  G   +Y +  +G+    + Q   A  + P WSP G ++     S
Sbjct: 607 SWSPDGKTIVFGSDDGG---IYAIAPDGTG---LHQLAAAGSWHPTWSPDGRVVFVRDTS 660

Query: 368 GEKF-----AIGVMKKDGSQER 384
              F      +  MK DGS  R
Sbjct: 661 ARTFFSTTGRVESMKLDGSDVR 682



 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 10/119 (8%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Q+  ++ +G+D ++++   ++S   P WSP G  IA+ + +G  +   +M+ DG+  R +
Sbjct: 497 QIVTVRPDGTDARQLATSGDSSAEYPAWSPDGTQIAYFRNTGGLY---LMQADGTGARRV 553

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP---AYASDPQW 442
                L+   WSP GR ++F R  D  T  K+ S+  +G    L   P   A   +P W
Sbjct: 554 ASVHGLET-AWSPDGREIVF-RDPDSQT-LKIVSM-ADGSVRALTGAPHDGAIPVEPSW 608



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 15/121 (12%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD +QI +  +  G   LY+MQ++G+  +R++        +  WSP G  I F    
Sbjct: 523 AWSPDGTQIAYFRNTGG---LYLMQADGTGARRVAS---VHGLETAWSPDGREIVFRDPD 576

Query: 368 GEKFAIGVMKKDGSQERLL--VEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +   I V   DGS   L     D  +   P+WSP G++++F     G     +Y+I  +
Sbjct: 577 SQTLKI-VSMADGSVRALTGAPHDGAIPVEPSWSPDGKTIVFGSDDGG-----IYAIAPD 630

Query: 425 G 425
           G
Sbjct: 631 G 631



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 11/160 (6%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +Q++ T          +  ++SPD  +IVF  D + +    V  ++GS +       + +
Sbjct: 543 MQADGTGARRVASVHGLETAWSPDGREIVFR-DPDSQTLKIVSMADGSVRALTGAPHDGA 601

Query: 349 Y-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
              +P WSP G  I F    G  +AI     DG+    L    +   PTWSP GR ++F 
Sbjct: 602 IPVEPSWSPDGKTIVFGSDDGGIYAI---APDGTGLHQLAAAGSWH-PTWSPDGR-VVFV 656

Query: 408 RKKDG----DTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           R         T  ++ S+ L+G +   + +   +   QW 
Sbjct: 657 RDTSARTFFSTTGRVESMKLDGSDVRSVGSVTASGPVQWA 696


>gi|302141778|emb|CBI18981.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 83/216 (38%), Gaps = 36/216 (16%)

Query: 217 PRFSPNQQKVAYATYDD-----------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           P FSP   ++AY  +              ++       T  D   KR G   +    P F
Sbjct: 288 PSFSPGGDRIAYVEFPGVYVVNRDGSGRREVFSGIAFSTAWDH--KRKGVVYTSA-GPTF 344

Query: 266 SSNGKRA-LISVQKDEA-MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           ++   +  ++S+  D+     Y          RLT   + +   ++SPD   IVF SDRE
Sbjct: 345 ATESTKVDIVSINVDDVDQPSYKKLTTGGGIHRLTEGPWTDTMCNWSPDGDWIVFASDRE 404

Query: 324 ----GKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAFTK----FSGEKFA-- 372
               G  +LYV+  NG+  +++     A   +  W SP G  I FT      S E  +  
Sbjct: 405 NPGGGGFELYVIHPNGTGLRKVVHSGSAGRTNHPWFSPDGKSIVFTSDYAAVSAEPISNA 464

Query: 373 --------IGVMKKDGSQERLLVEDSNLQA-PTWSP 399
                   I V+  DGS    L  +S     P W+P
Sbjct: 465 HHYQPYGDIFVVNLDGSGLHRLTHNSYEDGTPAWAP 500


>gi|319901098|ref|YP_004160826.1| peptidase S41 [Bacteroides helcogenes P 36-108]
 gi|319416129|gb|ADV43240.1| peptidase S41 [Bacteroides helcogenes P 36-108]
          Length = 1084

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R S +GK      + D    IY V ++     +LT       +  +SPDS QI F SDR 
Sbjct: 29  RISPDGKEIAFCYKGD----IYKVPVKGGTAMQLTTQDSYECTPVWSPDSKQIAFASDRY 84

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           G   ++VM +NG   +R++ +  A      ++P G  I F+
Sbjct: 85  GNFDIFVMPANGGTARRLTTN-SAGELPSTFTPDGKYILFS 124



 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 16/139 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F      K  +Y +   G    +++  +++    PVWSP    IAF      
Sbjct: 31  SPDGKEIAFCY----KGDIYKVPVKGGTAMQLTT-QDSYECTPVWSPDSKQIAFASDRYG 85

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRK-KDGDTG--------SKLY 419
            F I VM  +G   R L  +S  + P T++P G+ ++FS   +D  T         ++LY
Sbjct: 86  NFDIFVMPANGGTARRLTTNSAGELPSTFTPDGKYILFSASIQDAATSALFPTTAMTELY 145

Query: 420 SI-DLNGRNETLINTPAYA 437
            +    GR E ++ TPA A
Sbjct: 146 KVPSTGGRTEQVLGTPAEA 164


>gi|312886639|ref|ZP_07746246.1| amidohydrolase [Mucilaginibacter paludis DSM 18603]
 gi|311300741|gb|EFQ77803.1| amidohydrolase [Mucilaginibacter paludis DSM 18603]
          Length = 1078

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 19/163 (11%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +EP FSP+ + + Y ++ DE    +  +D        R+   R    +P++++ G +  I
Sbjct: 397 YEPEFSPDGKSLVYVSWADEMKGSINTIDLTTHLI-MRLTTDRGYYYSPKYANRGDK--I 453

Query: 275 SVQKDE-----------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             +K E           A  IY + +     + + N     I   +S D S+I ++S   
Sbjct: 454 IYRKGEGNEVLGYFFGNAPGIYIIPVTGGKPQLVINN---GIHPQFSADDSKIYYQSSEG 510

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            K+   VM  +G++QK +     A+ F P  SP G  +AFT+ 
Sbjct: 511 DKKAFKVMDVSGANQKTLYTSTYATQFAP--SPDGKWMAFTEL 551



 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 80/180 (44%), Gaps = 21/180 (11%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +       L      ++   +SPD   I + SD +G + +++M ++G +++ ++
Sbjct: 63  DIYAMPITGGKATLLAGGKAWDVQPRFSPDGKSISYTSDHDGGDNIWLMNADGGNKRPVT 122

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFSGEK-FAIGVM---KKDGSQERLLVEDSNLQ---- 393
           ++      +  W+P G  L+A   F+G +    G M    K+G     L +  N Q    
Sbjct: 123 KENFRLLNNASWTPDGQYLVARKHFTGSRSLGAGEMWLYYKNGGDGIQLTKRKNDQQDAG 182

Query: 394 APTWSPSGRSLIFSR--------KKDGDTGSKLYSID-LN---GRNETLINTPAYASDPQ 441
            P  SP G+ + +S         + + D  + +Y+I  LN   G  ET+      A  PQ
Sbjct: 183 EPVASPDGKYIYWSEDITPGPSFQYNKDPNAGIYAIKRLNRETGEIETVAGGAGGACRPQ 242



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 80/180 (44%), Gaps = 21/180 (11%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRIS 342
           IY+  L +   +R+T    +     +SPD   +V+ S   E K  +  +        R++
Sbjct: 376 IYTKALPNGVPQRITTGTDLEYEPEFSPDGKSLVYVSWADEMKGSINTIDLTTHLIMRLT 435

Query: 343 QDKEASYFDPVWSPQGDLIAFTK---------FSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            D+   Y+ P ++ +GD I + K         F G    I ++   G + +L++  +N  
Sbjct: 436 TDR-GYYYSPKYANRGDKIIYRKGEGNEVLGYFFGNAPGIYIIPVTGGKPQLVI--NNGI 492

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS------DPQWVGFMD 447
            P +S +  S I+ +  +GD       +D++G N+  + T  YA+      D +W+ F +
Sbjct: 493 HPQFS-ADDSKIYYQSSEGDK-KAFKVMDVSGANQKTLYTSTYATQFAPSPDGKWMAFTE 550


>gi|299137326|ref|ZP_07030508.1| peptidase S41 [Acidobacterium sp. MP5ACTX8]
 gi|298600731|gb|EFI56887.1| peptidase S41 [Acidobacterium sp. MP5ACTX8]
          Length = 1128

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 4/127 (3%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D++SV++   A  RLT++  +   AS SPD   + F +  EG +++Y +   G   +R +
Sbjct: 54  DLWSVNVHGGAAHRLTSSPGLERMASISPDGLTVAFSAQYEGPDEVYTIPITGGMPQRKT 113

Query: 343 QDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
            D  A    PV W P G L+  T         G++      ER  V  +      +S  G
Sbjct: 114 WDGGAV---PVGWKPDGRLVISTNRYSTLPDPGLVLVGSHGERERVPLATGSEAAYSADG 170

Query: 402 RSLIFSR 408
           ++L F+R
Sbjct: 171 KTLFFTR 177



 Score = 38.9 bits (89), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 7/172 (4%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR--ALISVQKDEAMDIYSVDLQSNATER 296
           V+ +  R  R  K  G+  +     RF  +GK   AL +   +     Y  + +    + 
Sbjct: 333 VFTLPVRSGRIIKVAGDSATRYRGARFLPDGKSVVALSTESGETEFWKYPANGEGKPEQW 392

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             +   +      SPD   +   +  +  EQL+V  +     KRI+Q     + D  WSP
Sbjct: 393 THDAKVLRWEGVPSPDGRWL---AHHDKDEQLWVYDTKTKQSKRIAQSTTGDFSDLSWSP 449

Query: 357 QGDLIAFTKFSGEKFA-IGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
               +A+ + +  +F+   V+  + G+   +  +  N   P WS  G+ L F
Sbjct: 450 DSRWLAYVETAENQFSQTKVLNVESGAITTITSDRYNSVNPIWSSDGKWLYF 501


>gi|238495090|ref|XP_002378781.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
 gi|220695431|gb|EED51774.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
          Length = 422

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 67/294 (22%), Positives = 119/294 (40%), Gaps = 54/294 (18%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R I H+ S   +QS  G +G     ++ ++  +  G  K  L + D DG N R L  S  
Sbjct: 36  RDIPHSPSPSAHQS--GRRGLGKDGVMLMNR-IAPGTSK--LYISDIDGGNERPLL-SDP 89

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------F 265
              +   FSP+ Q V + +  + D       ++ I R   +  + + ++  P        
Sbjct: 90  VFEYHASFSPDGQWVLFTSERNGD------GNSDIWRVRTKGSDLQPLVTTPAVEDSVVL 143

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREG 324
           S++G  A  +  +    +I+ +DL +     LT+T  I  + +  SPDS  I F SDR  
Sbjct: 144 STSGTHAAYASTEGMIANIWVLDLVTGNRWNLTDTPAIAATTNKTSPDSQWIAFSSDRNT 203

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG----EKFAIGVMKKDG 380
           K                            W+  G    F   SG    ++ +I  ++ DG
Sbjct: 204 K----------------------------WAGHG-WETFMGLSGWEHTQELSIFAIRPDG 234

Query: 381 SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +  R ++  E   L +P+WS  G+ +++       T     S D+N  N ++++
Sbjct: 235 TGFRKVIGKEGYALGSPSWSADGKRIVYYEMTRETTWDAHSSFDVNSANSSIVS 288


>gi|284037589|ref|YP_003387519.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
 gi|283816882|gb|ADB38720.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
          Length = 660

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 9/109 (8%)

Query: 263 PRFSSNGKRALISVQK---DEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P+ S +G+    ++ +   DE     DI+ V++Q+    +LTN+   N S ++SPD   +
Sbjct: 37  PKISPDGQWVAYTLTRTNWDENSYDTDIWLVNIQTGNRFQLTNSKKSNNSPAWSPDGKWL 96

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFT 364
            F S R+ K QLY++  +G + + IS+ +   + F   WSP G  I FT
Sbjct: 97  AFLSTRDDKPQLYLISPSGGEARAISKFETGVTAFR--WSPNGKQIVFT 143



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 99/247 (40%), Gaps = 48/247 (19%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +SP+ + +A+ +  D D  ++YL+      A + I  F + + A R+S NGK+ + + 
Sbjct: 87  PAWSPDGKWLAFLSTRD-DKPQLYLISPSGGEA-RAISKFETGVTAFRWSPNGKQIVFTA 144

Query: 277 ---------QKDEAMDIYSV--DLQSNATERLTNTLFINISAS----------------Y 309
                    ++ E    Y V  D        L ++LF    AS                 
Sbjct: 145 TVPDAKPDKERKEKYSDYEVVRDDYKMVHLYLIDSLFNEKPASAKPLTRGKDFSVGNFVV 204

Query: 310 SPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD  +I +++ R           LYV+    +  ++I   K     DPVWSP G  IAF
Sbjct: 205 SPDGKKIAYDAARNPDLINGHTSDLYVLTLGDTISRKIVSLKGPDQ-DPVWSPDGKQIAF 263

Query: 364 TKFSGEKF------AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
              +  +F       I  +   G    +L    D N     W+P G  ++FS  +   T 
Sbjct: 264 VTANENEFYFYTNRLIATVPATGGTPTMLTNTFDENANLLDWTPDG--ILFSGYQ--KTS 319

Query: 416 SKLYSID 422
           S L+ +D
Sbjct: 320 SHLFRLD 326


>gi|188994620|ref|YP_001928872.1| prolyl oligopeptidase [Porphyromonas gingivalis ATCC 33277]
 gi|188594300|dbj|BAG33275.1| prolyl oligopeptidase [Porphyromonas gingivalis ATCC 33277]
          Length = 684

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 14/165 (8%)

Query: 291 SNATERLTNTLFINIS----ASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKR 340
           +N  E LT  LF+ +S     + SPD    V+          +   +L+ +  +GS +K+
Sbjct: 25  TNTGEHLTPELFMTLSRVSEMALSPDGKTAVYAVSFPDVKTNKATRELFTVNLDGSGRKQ 84

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSP 399
           I+ D E++ + P W   G  IAF    G    + VM  DG++ R L   +  +    +SP
Sbjct: 85  IT-DTESNEYAPAWMADGKRIAFMSNEGGSMQLWVMNADGTERRQLSNIEGGITGFLFSP 143

Query: 400 SGRSLIFSRK-KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             + ++F++  K G     +Y  DL+     +I    Y    +WV
Sbjct: 144 DEKQVLFTKDIKFGKRTKDIYP-DLDKATGRIITDLMYKHWDEWV 187



 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 57/107 (53%), Gaps = 7/107 (6%)

Query: 265 FSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            S +GK A+ +V            ++++V+L  +  +++T+T     + ++  D  +I F
Sbjct: 47  LSPDGKTAVYAVSFPDVKTNKATRELFTVNLDGSGRKQITDTESNEYAPAWMADGKRIAF 106

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S+  G  QL+VM ++G++++++S + E      ++SP    + FTK
Sbjct: 107 MSNEGGSMQLWVMNADGTERRQLS-NIEGGITGFLFSPDEKQVLFTK 152


>gi|298241759|ref|ZP_06965566.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297554813|gb|EFH88677.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 808

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/264 (21%), Positives = 114/264 (43%), Gaps = 52/264 (19%)

Query: 212 QILFEPRFSPNQQKVAYA-----TYDDEDILRVYLMDTRIDR--APKRIGNFRSMILAPR 264
           +++ EP+ SP+ +++A++     T  +     ++++++R  +  +P ++ +      APR
Sbjct: 171 RVVGEPQISPDGKRIAFSVLQCDTETNSTSSAIWIVESRGGKTQSPWQVSSGTQHDYAPR 230

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES--- 320
           +S +G+       ++    IY + L+     +L+N L + +S  S+ PD + ++  S   
Sbjct: 231 WSPDGRYLSFLSDREGTPQIYLLPLRGGEARQLSN-LPLGVSEYSWRPDGAILLAHSAWK 289

Query: 321 --DREG---------------------------KEQLYVMQSNGSDQKRISQDKEASYFD 351
             D +G                            EQL+++  +G+  +  S+  + +   
Sbjct: 290 AADEQGSGQGEETSYVVMRLASHWDGAGYKHGRHEQLWLLGLDGTTTRLTSEPVDLTQV- 348

Query: 352 PVWSPQGDLIAFTKFS------GEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSL 404
             WSP G  I F+             A+ V+    G   RL  E+   Q P+WSP GRS+
Sbjct: 349 -CWSPDGSEIVFSANRRADPDLSVSAALWVLTLATGQLRRLTPEEELAQMPSWSPDGRSI 407

Query: 405 IFSRKKDGDTGSKL--YSIDLNGR 426
            + R  D    S +  + +  NG+
Sbjct: 408 AYLRSPDQTEASNISPWIVAANGQ 431



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 33/186 (17%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R +S+   A     + E + +  +D     T RLT+         +SPD S+IVF ++R 
Sbjct: 308 RLASHWDGAGYKHGRHEQLWLLGLD---GTTTRLTSEPVDLTQVCWSPDGSEIVFSANRR 364

Query: 324 G------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-- 375
                     L+V+       +R++ ++E +   P WSP G  IA+ +   +  A  +  
Sbjct: 365 ADPDLSVSAALWVLTLATGQLRRLTPEEELAQM-PSWSPDGRSIAYLRSPDQTEASNISP 423

Query: 376 --MKKDGSQ----ERLLVEDSNLQ-------------APTWSPSGRSLIFSRKKDGDTGS 416
             +  +G +         ED N Q             AP WSP G++L+   +  G    
Sbjct: 424 WIVAANGQETPRPAATGAEDINSQMWIIDELRTDYLVAPQWSPDGQALLVPGQTHGQI-- 481

Query: 417 KLYSID 422
            LY I+
Sbjct: 482 HLYRIN 487


>gi|315128152|ref|YP_004070155.1| protease [Pseudoalteromonas sp. SM9913]
 gi|315016665|gb|ADT70003.1| protease [Pseudoalteromonas sp. SM9913]
          Length = 1073

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/216 (25%), Positives = 92/216 (42%), Gaps = 52/216 (24%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDS 313
           N    I +   S +GKRA+ + + +    ++SV ++   T  L+ T     I AS+SP+ 
Sbjct: 313 NVSDFIDSMSLSHDGKRAVFTARGE----LFSVPIKQGPTRNLSYTEKSREIDASWSPNG 368

Query: 314 SQIVFESDREGKEQLYVM-QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------- 364
             I + SD  G+ ++Y+  +S  +  K+++ +     F P+WSP    + F+        
Sbjct: 369 RYITYMSDESGEYEIYLKDRSKNNAIKQLTSNGTIWRFTPIWSPDSSKLLFSDKNNTLWW 428

Query: 365 --KFSGEKFAI--GVMKKDG---------SQE-------------------------RLL 386
               SG++  I  G+  +DG         SQ+                         RL 
Sbjct: 429 LDAKSGKQHKIDTGIYDEDGITQYTWSPNSQDIVFVKNNENRYASLWHYNLKKKKVTRLT 488

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            E SN Q PT+SP G+ L FS ++D +     Y  D
Sbjct: 489 DEMSNEQNPTFSPDGQYLYFSSERDFNLAFSSYEFD 524



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 75/184 (40%), Gaps = 22/184 (11%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY  + Q+  ++RLT+ +       +SPD  +I F ++  G  Q+YV+ S+GS+ K+++
Sbjct: 47  DIYIANTQTGESKRLTDHIGFETFPKFSPDGKRIAFSAEYNGSRQIYVINSDGSNLKQLT 106

Query: 343 QDKEASYFDPV---------WSPQGDLIAF----TKFSGEKFAIGVMKKDGSQERLLV-- 387
              +     P          W+  G  + F    T +        ++  DG  E+ L   
Sbjct: 107 YYNDVGPMPPRGGFDYRVLDWTADGKNVVFRANRTPWGKRMGRPYMVPADGGLEQPLAIP 166

Query: 388 -EDSNLQAP-----TWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDP 440
                + +P      ++P  R     ++  G     ++  DL    +E L    A    P
Sbjct: 167 ETGGGMLSPDGSKYVYTPIDREFRTWKRTRGGRAQDVWIYDLEKNTSEQLTTNRATDQQP 226

Query: 441 QWVG 444
            WVG
Sbjct: 227 TWVG 230


>gi|312889308|ref|ZP_07748862.1| amidohydrolase [Mucilaginibacter paludis DSM 18603]
 gi|311298185|gb|EFQ75300.1| amidohydrolase [Mucilaginibacter paludis DSM 18603]
          Length = 1075

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 19/180 (10%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S NGK  L ++  D    IY + +   +  ++T  + +N S  +SPD  +I + SD  G
Sbjct: 66  ISPNGKLILFTLLGD----IYKLPITGGSATQITRGMAMNCSPVWSPDGKKIAYISDESG 121

Query: 325 KEQLYVMQSNGSDQKRISQDK---EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              L++M + G  ++ +++ K    A +  P W+P G  ++  +         V    G 
Sbjct: 122 GYGLHIMDTTGKSKRLLTKAKLPLYARFNAPKWTPDGLAVSVDQM--------VYPLIGG 173

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN--ETLINTPAYASD 439
           +ERL   DSN+   ++       +F    D D       I  N  N  +T+I T  +  D
Sbjct: 174 EERL--PDSNMPVDSFIGFSSDGLFMYYSDFDLNGNTIIIKYNRINSAKTIIYTARHKQD 231


>gi|325103152|ref|YP_004272806.1| amidohydrolase [Pedobacter saltans DSM 12145]
 gi|324972000|gb|ADY50984.1| amidohydrolase [Pedobacter saltans DSM 12145]
          Length = 1075

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 10/136 (7%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +     E L   L   +   +SPD   I + SD++G + +++M ++GS ++ I+
Sbjct: 63  DIYKMPVTGGDAELLAGGLAWEVQPRFSPDGKLISYTSDKDGADNIWIMNADGSGKRAIT 122

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFSGEKF-AIGVM----KKDGSQERLLVE----DSNL 392
           ++      + VW+P G  L+A   F G +  A G +       G +   L +      NL
Sbjct: 123 KENINLLNNAVWTPDGQYLVARKNFLGRRTNAAGELWMYHVSGGFEGTQLTQRKRGQRNL 182

Query: 393 QAPTWSPSGRSLIFSR 408
             P  S SG+ L +S 
Sbjct: 183 GEPFVSKSGKELYYSE 198



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 70/154 (45%), Gaps = 15/154 (9%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRIS 342
           IY  +L     ERLT          +SPD + I++ S + E K  +  +  +     +++
Sbjct: 376 IYVKNLPDGKPERLTTETDWEFDPCFSPDGNFIIYTSWNDELKGSIMKIDLSSKKIDKLT 435

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKF---------AIGVMKKDGSQERLLVEDSNLQ 393
             +   Y+ P +S +GDLI + K  G             I  +  +G + +L++++    
Sbjct: 436 P-RGGFYYTPKFSNKGDLIVYRKGVGNDLLGFTFSKNPGIYTISANGGEPKLILKEG--L 492

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            P ++ S   + ++ K+DG   + L S DL+G N
Sbjct: 493 KPQFNKSDNRIFYTAKEDGK--NALKSCDLSGNN 524


>gi|206889249|ref|YP_002248789.1| protein TolB, putative [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741187|gb|ACI20244.1| protein TolB, putative [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 395

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 86/420 (20%), Positives = 174/420 (41%), Gaps = 48/420 (11%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L + +V IG  F   I+    +     +   +++A   F  +  L   V E    +L+ +
Sbjct: 11  LIISIVFIGPVFAEKIY----LDITQPSIKKLTLAMEGFEKVPVLFNTVKE----NLEFT 62

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
           + F +     +K +  +P        W S   +++V    +       ++  +++ V   
Sbjct: 63  EYFRIYGPFPYKGEGFDPSL------WKSSDVEIVVRAETLN------KISIQVFTVTAS 110

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
             I  K++  +   +    + IS DIY+ +TG+K  F +R +F+ +   S      + + 
Sbjct: 111 SPIFAKEYPLNDNEYT--GNLISSDIYKLLTGKKAPFFNRFIFIKKFSKS----MGIFIS 164

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGN 255
           + +G  I      RD I    R      K+ Y++ + +   + +Y + TR+++       
Sbjct: 165 NWNGKTIHDTGIRRDII---SRVVLRGNKIFYSSLEGKFWHIEIYDLSTRLNKEI----- 216

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +S  L       G    I ++ D  +    +   S  +  + ++ +I  S  +   +SQ
Sbjct: 217 IKSKALLQLGDVIGDSQFIYLENDGEISQIKITDLSGKSRTVASSRWIESSPRW--HASQ 274

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           I F S+R G  Q+Y     G+  +RI+ Q +  +  +P  SP G  +AF+   G  F I 
Sbjct: 275 IFFVSNRAGSPQIY-QAVEGAGARRITFQGRYNT--EPSISPDGSKLAFSSLVG-GFQIY 330

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           ++      +  + ++ N + P++ P G  L     + G    ++Y I  +G    LI  P
Sbjct: 331 ILDLLSGTQNQITKEGNNEQPSFCPDGNFLTIMSDRRGK--KEIYLISQDG----LIQKP 384


>gi|257459074|ref|ZP_05624193.1| protein TolB [Campylobacter gracilis RM3268]
 gi|257443459|gb|EEV18583.1| protein TolB [Campylobacter gracilis RM3268]
          Length = 415

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 99/213 (46%), Gaps = 9/213 (4%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +F    S  Q +  Y  Y +++   +Y  +   + +  +I     M +A   S++G++ L
Sbjct: 191 IFPKWASAAQNEFYYTYYVNKNTPAIYKFNLS-NGSKSKIFTGHGMTIASDVSADGRKLL 249

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           I+    +  DIY  D+ S + +++T+   I+++ ++    S++ F SDR G   ++    
Sbjct: 250 ITNAPKDQPDIYLYDIASGSAKQITDYAGIDVNGNFIDGDSRVAFVSDRLGYPNVFATSI 309

Query: 334 NGSD-QKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           NG + Q+ +   K     +   S  G+ + + ++  G  F I ++       R L     
Sbjct: 310 NGGNVQQLVYHGKN----NNSISTNGNYVTYSSRDGGGGFNIYLISTQTDMIRQLTASGK 365

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              P +S  G S++F  K+DG +GS +  I +N
Sbjct: 366 NMFPRFSSDGGSIMF-IKQDG-SGSSVGIIRVN 396


>gi|212692527|ref|ZP_03300655.1| hypothetical protein BACDOR_02023 [Bacteroides dorei DSM 17855]
 gi|212664938|gb|EEB25510.1| hypothetical protein BACDOR_02023 [Bacteroides dorei DSM 17855]
          Length = 1084

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 18/138 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + SNG    +++   +ASY  +P+WSP    IAF     
Sbjct: 31  SPDGTEIAFCY----KGDIYKVPSNGGTATQLTT--QASYECNPIWSPDSKQIAFASDRN 84

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSID----- 422
             F + VM  DG   R L   S  + P T++  G  ++FS        S L+        
Sbjct: 85  GNFDLFVMSADGGAARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTEL 144

Query: 423 -----LNGRNETLINTPA 435
                  GR E ++ TPA
Sbjct: 145 YKVPVTGGRTEQVLGTPA 162



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V        +LT       +  +SPDS QI F SDR G   L+VM ++G   +R++
Sbjct: 44  DIYKVPSNGGTATQLTTQASYECNPIWSPDSKQIAFASDRNGNFDLFVMSADGGAARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++  G+ I F+
Sbjct: 104 T-HSASEIPSTFTTDGNYILFS 124


>gi|189468186|ref|ZP_03016971.1| hypothetical protein BACINT_04582 [Bacteroides intestinalis DSM
           17393]
 gi|189436450|gb|EDV05435.1| hypothetical protein BACINT_04582 [Bacteroides intestinalis DSM
           17393]
          Length = 1066

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 16/139 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD ++IVF      K  LY + + G    +++  +++    P+WSP G  IAF      
Sbjct: 31  SPDGTEIVFCY----KGDLYKVPAKGGTATQLTT-QDSYECTPIWSPDGKQIAFASDRNG 85

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS---------KLY 419
            F I +M  +G   + L   S  + P+ ++P G+ ++FS        S         +LY
Sbjct: 86  NFDIFIMSANGGTAQRLTTHSATELPSAFTPDGKYILFSASIQDPASSALFPSAAMTELY 145

Query: 420 SI-DLNGRNETLINTPAYA 437
            +  + GR E ++ TPA A
Sbjct: 146 KVPSVGGRTEQVLATPAEA 164



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y V  +     +LT       +  +SPD  QI F SDR G   +++M +NG   +R++
Sbjct: 44  DLYKVPAKGGTATQLTTQDSYECTPIWSPDGKQIAFASDRNGNFDIFIMSANGGTAQRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               A+     ++P G  I F+
Sbjct: 104 T-HSATELPSAFTPDGKYILFS 124


>gi|237709151|ref|ZP_04539632.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229456847|gb|EEO62568.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 1084

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 18/138 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + SNG    +++   +ASY  +P+WSP    IAF     
Sbjct: 31  SPDGTEIAFCY----KGDIYKVPSNGGTATQLTT--QASYECNPIWSPDSKQIAFASDRN 84

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSID----- 422
             F + VM  DG   R L   S  + P T++  G  ++FS        S L+        
Sbjct: 85  GNFDLFVMSADGGAARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTEL 144

Query: 423 -----LNGRNETLINTPA 435
                  GR E ++ TPA
Sbjct: 145 YKVPVTGGRTEQVLGTPA 162



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V        +LT       +  +SPDS QI F SDR G   L+VM ++G   +R++
Sbjct: 44  DIYKVPSNGGTATQLTTQASYECNPIWSPDSKQIAFASDRNGNFDLFVMSADGGAARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++  G+ I F+
Sbjct: 104 T-HSASEIPSTFTTDGNYILFS 124


>gi|308048966|ref|YP_003912532.1| two component transcriptional regulator, winged helix family
           [Ferrimonas balearica DSM 9799]
 gi|307631156|gb|ADN75458.1| putative two component transcriptional regulator, winged helix
           family [Ferrimonas balearica DSM 9799]
          Length = 696

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 66/158 (41%), Gaps = 11/158 (6%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS---PDSSQIVFESDREGKE 326
           +RAL + Q+      Y +D+ S   + L          SY    P   Q+VF S  +   
Sbjct: 366 RRALFASQRSRIRSGYLLDVDSGERQSLPIA-----GLSYPRKVPGQPQVVFHS-WDHAN 419

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + V+     +        EAS+ DP   P    +A+       + I +   DG + +L 
Sbjct: 420 YISVLARGDLNHNEPYLRSEASHQDPALEPGSGRLAYVSNESGYYEIWLQDADGERRQLT 479

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +S L+ P WS  G SL F     G+ G++LY +DL 
Sbjct: 480 RMESQLRHPAWSHDGHSLAF--LGPGEQGNQLYVMDLE 515


>gi|297183048|gb|ADI19193.1| periplasmic component of the tol biopolymer transport system
           [uncultured delta proteobacterium HF0130_20J24]
          Length = 441

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 23/227 (10%)

Query: 216 EPRFSPN--QQKVAYATYDDEDILRVYLMDTRID-------RAPKRIGNFRSMI--LAPR 264
           + RFS N     +A  ++D+++IL      + +        R   +I +F S    L   
Sbjct: 199 QKRFSYNLGSNNLASWSFDNKNILYTTFTRSSVQLTIQPSIRLRAKILSFPSAFQPLGAS 258

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE- 323
           +  +G+  L+++ K    DIYS +L++   E++     +  S   S D  +I F SD   
Sbjct: 259 WRIDGESILLTLMKKGNSDIYSYNLKNAKLEKIFAWKSLETSPQMSQDGQKIAFVSDSAS 318

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQG-DLIAFTKFSG--EKFAIGVMKK 378
             + Q+YV        +R++     SY   P WSP    LI   +  G  + F   +  +
Sbjct: 319 PNRPQIYVYNLLNRKTERVTF--RGSYNSSPKWSPDATQLIYERQVKGVFQLFKYTLHNR 376

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             +Q      DS  + P WSP+G+ ++FS KK G+  SKLY I   G
Sbjct: 377 RHTQLTFGRYDS--EKPDWSPNGKQIVFSAKK-GNV-SKLYYISAFG 419



 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 83/173 (47%), Gaps = 14/173 (8%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM----DIYSVD 288
           + DI    L + ++++    I  ++S+  +P+ S +G++  I+   D A      IY  +
Sbjct: 275 NSDIYSYNLKNAKLEK----IFAWKSLETSPQMSQDGQK--IAFVSDSASPNRPQIYVYN 328

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           L +  TER+T     N S  +SPD++Q+++E   +G  QL+    +     +++  +  S
Sbjct: 329 LLNRKTERVTFRGSYNSSPKWSPDATQLIYERQVKGVFQLFKYTLHNRRHTQLTFGRYDS 388

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQA--PTWS 398
              P WSP G  I F+   G    +  +   G +  R+   D+N++   P WS
Sbjct: 389 E-KPDWSPNGKQIVFSAKKGNVSKLYYISAFGGRTIRVTTNDNNIEETNPVWS 440


>gi|265752680|ref|ZP_06088249.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263235866|gb|EEZ21361.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 1084

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 18/138 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + SNG    +++   +ASY  +P+WSP    IAF     
Sbjct: 31  SPDGTEIAFCY----KGDIYKVPSNGGTATQLTT--QASYECNPIWSPDSKQIAFASDRN 84

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSID----- 422
             F + VM  DG   R L   S  + P T++  G  ++FS        S L+        
Sbjct: 85  GNFDLFVMSADGGAARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTEL 144

Query: 423 -----LNGRNETLINTPA 435
                  GR E ++ TPA
Sbjct: 145 YKVPVTGGRTEQVLGTPA 162



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V        +LT       +  +SPDS QI F SDR G   L+VM ++G   +R++
Sbjct: 44  DIYKVPSNGGTATQLTTQASYECNPIWSPDSKQIAFASDRNGNFDLFVMSADGGAARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++  G+ I F+
Sbjct: 104 T-HSASEIPSTFTTDGNYILFS 124


>gi|237724368|ref|ZP_04554849.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229437237|gb|EEO47314.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 1084

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 63/138 (45%), Gaps = 18/138 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + SNG    +++   +ASY  +P+WSP    IAF     
Sbjct: 31  SPDGTEIAFCY----KGDIYKVPSNGGTATQLTT--QASYECNPIWSPDSKQIAFASDRN 84

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGS---------KL 418
             F + VM  DG   R L   S  + P T++  G  ++FS        S         +L
Sbjct: 85  GNFDLFVMSADGGAARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTEL 144

Query: 419 YSIDL-NGRNETLINTPA 435
           Y + +  GR E ++ TPA
Sbjct: 145 YKVPVTGGRTEQVLGTPA 162



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V        +LT       +  +SPDS QI F SDR G   L+VM ++G   +R++
Sbjct: 44  DIYKVPSNGGTATQLTTQASYECNPIWSPDSKQIAFASDRNGNFDLFVMSADGGAARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++  G+ I F+
Sbjct: 104 T-HSASEIPSTFTTDGNYILFS 124


>gi|115456491|ref|NP_001051846.1| Os03g0840200 [Oryza sativa Japonica Group]
 gi|50428662|gb|AAT77013.1| putative F8K7.10 protein [Oryza sativa Japonica Group]
 gi|108712007|gb|ABF99802.1| WD40-like Beta Propeller Repeat family protein, expressed [Oryza
           sativa Japonica Group]
 gi|113550317|dbj|BAF13760.1| Os03g0840200 [Oryza sativa Japonica Group]
 gi|215695413|dbj|BAG90604.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215713452|dbj|BAG94589.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 688

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLI 361
           N   S SPD   +VF S R G + LY++ +   +   I +  E  + D +  WSP G+ I
Sbjct: 483 NAFPSPSPDGKWVVFRSGRSGNKNLYIIDAEDGEAGGIRRLTEGPWSDTMCNWSPDGEWI 542

Query: 362 AFTK----FSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFS 407
           AF           FAI ++  +G+  R +V          P +SP  +SL+F+
Sbjct: 543 AFASDRHAPGSGSFAIYMVHPNGTGLRRVVHSGGSGRTNHPWFSPDSKSLVFT 595



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 29/163 (17%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTNTLFINISASYSPDSSQIVFE 319
           P  S +GK  +    +    ++Y +D +   +    RLT   + +   ++SPD   I F 
Sbjct: 486 PSPSPDGKWVVFRSGRSGNKNLYIIDAEDGEAGGIRRLTEGPWSDTMCNWSPDGEWIAFA 545

Query: 320 SDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAFT---------- 364
           SDR     G   +Y++  NG+  +R+     +   +  W SP    + FT          
Sbjct: 546 SDRHAPGSGSFAIYMVHPNGTGLRRVVHSGGSGRTNHPWFSPDSKSLVFTSDYAAVSAEP 605

Query: 365 -------KFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSP 399
                  +  GE F + +   DGS  R L  +S     P+W+P
Sbjct: 606 VSNPHHYQPYGEIFTVDI---DGSNIRRLTHNSFEDGTPSWTP 645


>gi|322437622|ref|YP_004219712.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321165515|gb|ADW71218.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 621

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 22/207 (10%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           ILF  ES   G+  NS+ V+  DGA   +LTP R +     +FSP   ++ Y T    D 
Sbjct: 141 ILF--ESGRRGV--NSIMVVSPDGAVTSFLTPPRLEAT-SAKFSPKGDQIVYTT-RARDY 194

Query: 237 LRVYLMDTRID-RAPKRIGNFRSMILAP------------RFSSNGKRALISVQKDEAMD 283
               L   R D ++ +  G    +  AP             +S +GK  +  +Q      
Sbjct: 195 FSGRLETLRFDTQSGQPAGKPTILYTAPVDRGGGWSIRGADWSPDGKTLVTVLQNSGWEH 254

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRI 341
           IY++     A  ++T+  F +    YSPD   I F S R   E   +++M + G +  ++
Sbjct: 255 IYTLPASGGAPRQITDGQFEDTDPIYSPDGKHIAFISSRGLLEARNVFIMLATGGEPTQL 314

Query: 342 SQDKEASYFDPV-WSPQGDLIAFTKFS 367
           ++ +       V WSP    + F   S
Sbjct: 315 AKFEVPGMVSQVQWSPDSRKLYFNHLS 341



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 35/195 (17%)

Query: 283 DIYSVDLQSNATERLTNTLF--------INISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +I+ V +   A +RLTN            + + S+SPD   I+FES R G   + V+  +
Sbjct: 100 NIWLVSVSGGAPKRLTNAPAGGGDPRQSADRAPSWSPDGRWILFESGRRGVNSIMVVSPD 159

Query: 335 GSDQKRISQDK-EASYFDPVWSPQGDLIAFTK-----FSGE----KFAIGVMKKDGSQER 384
           G+    ++  + EA+     +SP+GD I +T      FSG     +F     +  G    
Sbjct: 160 GAVTSFLTPPRLEATSAK--FSPKGDQIVYTTRARDYFSGRLETLRFDTQSGQPAGKPTI 217

Query: 385 LLVEDSN------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI------- 431
           L     +      ++   WSP G++L+   +  G     +Y++  +G     I       
Sbjct: 218 LYTAPVDRGGGWSIRGADWSPDGKTLVTVLQNSG--WEHIYTLPASGGAPRQITDGQFED 275

Query: 432 NTPAYASDPQWVGFM 446
             P Y+ D + + F+
Sbjct: 276 TDPIYSPDGKHIAFI 290


>gi|125588578|gb|EAZ29242.1| hypothetical protein OsJ_13305 [Oryza sativa Japonica Group]
          Length = 688

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLI 361
           N   S SPD   +VF S R G + LY++ +   +   I +  E  + D +  WSP G+ I
Sbjct: 483 NAFPSPSPDGKWVVFRSGRSGNKNLYIIDAEDGEAGGIRRLTEGPWSDTMCNWSPDGEWI 542

Query: 362 AFTK----FSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFS 407
           AF           FAI ++  +G+  R +V          P +SP  +SL+F+
Sbjct: 543 AFASDRHAPGSGSFAIYMVHPNGTGLRRVVHSGGSGRTNHPWFSPDSKSLVFT 595



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 66/163 (40%), Gaps = 29/163 (17%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTNTLFINISASYSPDSSQIVFE 319
           P  S +GK  +    +    ++Y +D +   +    RLT   + +   ++SPD   I F 
Sbjct: 486 PSPSPDGKWVVFRSGRSGNKNLYIIDAEDGEAGGIRRLTEGPWSDTMCNWSPDGEWIAFA 545

Query: 320 SDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAFT---------- 364
           SDR     G   +Y++  NG+  +R+     +   +  W SP    + FT          
Sbjct: 546 SDRHAPGSGSFAIYMVHPNGTGLRRVVHSGGSGRTNHPWFSPDSKSLVFTSDYAAVSAEP 605

Query: 365 -------KFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSP 399
                  +  GE F + +   DGS  R L  +S     P+W+P
Sbjct: 606 VSNPHHYQPYGEIFTVDI---DGSNIRRLTHNSFEDGTPSWTP 645


>gi|320101738|ref|YP_004177329.1| WD40-like beta Propeller containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319749020|gb|ADV60780.1| WD40-like beta Propeller containing protein [Isosphaera pallida
           ATCC 43644]
          Length = 729

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 263 PRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P+ S  G R + +V+           D++ VD Q     +LT+    +    +SPD   +
Sbjct: 79  PQVSPQGDRIVYTVKVIDRETGRSNTDLWLVDRQGKTPRQLTSHPGSDRHPRWSPDGRSV 138

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            F SDR G  Q++++  + S + R           P+WSPQGD +A
Sbjct: 139 AFLSDRSGSTQVWLLPMDQSGEARQLTRLPLDVEGPIWSPQGDRLA 184



 Score = 40.0 bits (92), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 351 DPVWSPQGDLIAFT-----KFSGEKFA-IGVMKKDGSQERLLVEDSNL-QAPTWSPSGRS 403
           DP  SPQGD I +T     + +G     + ++ + G   R L       + P WSP GRS
Sbjct: 78  DPQVSPQGDRIVYTVKVIDRETGRSNTDLWLVDRQGKTPRQLTSHPGSDRHPRWSPDGRS 137

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           + F   + G T   L  +D +G    L   P     P W
Sbjct: 138 VAFLSDRSGSTQVWLLPMDQSGEARQLTRLPLDVEGPIW 176


>gi|242279944|ref|YP_002992073.1| hypothetical protein Desal_2478 [Desulfovibrio salexigens DSM 2638]
 gi|242122838|gb|ACS80534.1| WD40 domain protein beta Propeller [Desulfovibrio salexigens DSM
           2638]
          Length = 457

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/212 (20%), Positives = 90/212 (42%), Gaps = 6/212 (2%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           LCV DR    I   +   + ++  P F P+    A  T +      ++L++    +  K 
Sbjct: 251 LCVWDRATGKIDQKSFPGNTVI-GPEFLPDGNMAATLTMNGNS--DIFLINGNY-KPKKA 306

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +    ++ ++P F   G++ + +  +     I+ +D++S    R+T     N + + SPD
Sbjct: 307 LAKSWAIEVSPDFDRTGEKMVFTSARFGNPHIFLLDMKSGVVTRITTEGKYNTNPTISPD 366

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              + F        +++V     + Q+R       +  DP + P G  IAF+     K+ 
Sbjct: 367 GRYVAFSRQTPLGHRIFVHDLK-TGQERQLTFGPGNDEDPAFGPDGYFIAFSSSRNGKYK 425

Query: 373 IGVMKKDGSQERLLVEDSNL-QAPTWSPSGRS 403
           I +  + G    L+   + + +AP W  + +S
Sbjct: 426 IYLTTRHGDPAMLVPTGNGVAKAPAWGKAHKS 457


>gi|193216325|ref|YP_001997524.1| WD40 domain-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193089802|gb|ACF15077.1| WD40 domain protein beta Propeller [Chloroherpeton thalassium ATCC
           35110]
          Length = 1114

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 117/276 (42%), Gaps = 42/276 (15%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           DIY   T +K +F        E +VSG  +++L     D   ++ LTP+         +S
Sbjct: 329 DIYIGSTIKKDEF--------EKIVSG--QDAL-----DFEELKILTPA-------ITWS 366

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ +K+A AT        + L+D       K   N    I +  +S +GK       K  
Sbjct: 367 PDGKKIAIATKAGSSD-AIMLIDVESHDTKKITFNLDG-IFSVDWSPDGKMLCFIGNKTY 424

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D+Y  DL+S   + LTN +F +   S+SPD  +I F SDR     +  +       + 
Sbjct: 425 KSDVYIYDLESKTLQNLTNDVFSDSDPSWSPDGQKIFFVSDRTNHLNVKPIAVETDTSRA 484

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWS 398
           +   +E ++         D+  +  F  + + + + K   S  R L   S +   +P  S
Sbjct: 485 VRFTREETF---------DMTNYDYFQKDVYELSLGK---SSLRRLTATSAIDESSPIVS 532

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           P G++L+F    +G     +Y +DL   +  L NTP
Sbjct: 533 PDGKTLLFVSDLNGIY--NVYKLDLT--DPGLKNTP 564



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 13/150 (8%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPV--------W 354
           N S S SP   +  F +DR G   +Y+  +   D+ ++I   ++A  F+ +        W
Sbjct: 306 NTSPSISPQGDKFAFITDRNGYFDIYIGSTIKKDEFEKIVSGQDALDFEELKILTPAITW 365

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           SP G  IA    +G   AI ++  +    +++      + +  WSP G+ L F   K   
Sbjct: 366 SPDGKKIAIATKAGSSDAIMLIDVESHDTKKITFNLDGIFSVDWSPDGKMLCFIGNK--T 423

Query: 414 TGSKLYSIDLNGRN-ETLINTPAYASDPQW 442
             S +Y  DL  +  + L N     SDP W
Sbjct: 424 YKSDVYIYDLESKTLQNLTNDVFSDSDPSW 453


>gi|255558602|ref|XP_002520326.1| conserved hypothetical protein [Ricinus communis]
 gi|223540545|gb|EEF42112.1| conserved hypothetical protein [Ricinus communis]
          Length = 708

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 108/263 (41%), Gaps = 34/263 (12%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y    G   D  S   F+ E++ S + + SL  +D    +    +P  D+I F       
Sbjct: 375 YHRCRGASNDKKSSTQFMLENIKSPVAEISLFRID---GSFPSWSPGGDRIAFV-----E 426

Query: 223 QQKVAYATYDDEDILRVY---LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
              V     D  D  +VY      T  D  P R G   S    P F+S          + 
Sbjct: 427 FPGVYVVNRDGTDRRQVYPGNAFGTTWD--PVRPGVVYSSA-GPEFAS----------ES 473

Query: 280 EAMDIYSVDL-QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             +DI S+++ Q  + ++LT     N   + SPD   IVF S R G + LY+M +   ++
Sbjct: 474 TEVDIISINVDQVGSFKKLTTNGKNNAFPAVSPDGKWIVFRSGRSGYKNLYIMDAVEGEK 533

Query: 339 KRISQDKEASYFDPV--WSPQGDLIAFT----KFSGEKFAIGVMKKDGSQERLLVED--- 389
             + +  E  + D +  WS  G+ IAF           F + ++  +G+  + LV+    
Sbjct: 534 GGLYRLTEGPWGDTMCSWSIDGEWIAFASDRENPGSASFELFLIHPNGTGLKRLVKSGLG 593

Query: 390 SNLQAPTWSPSGRSLIFSRKKDG 412
                P +SP G+S++F+    G
Sbjct: 594 GRTNHPYFSPDGKSIVFTTDYGG 616


>gi|298481788|ref|ZP_06999978.1| MdsD protein [Bacteroides sp. D22]
 gi|298272010|gb|EFI13581.1| MdsD protein [Bacteroides sp. D22]
          Length = 1096

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 64/141 (45%), Gaps = 18/141 (12%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
           A  SPD S+IVF      K  +Y + + G    +++   + SY  +PVWS  G  IAF  
Sbjct: 28  ARISPDGSEIVFCY----KGDIYKVPAQGGTAVQLTT--QTSYEANPVWSSDGKQIAFAS 81

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGS-------- 416
                F I +M  DG   R L   S  + P T++P G+ + FS        S        
Sbjct: 82  DRNGNFDIFIMPADGGAARRLTYHSASEIPSTFTPDGKYVFFSASIQDPASSALFPTGAM 141

Query: 417 -KLYSIDL-NGRNETLINTPA 435
            +LY + +  GR E ++ TPA
Sbjct: 142 TELYKVPVAGGRTEQVLGTPA 162



 Score = 43.1 bits (100), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  Q     +LT       +  +S D  QI F SDR G   +++M ++G   +R++
Sbjct: 44  DIYKVPAQGGTAVQLTTQTSYEANPVWSSDGKQIAFASDRNGNFDIFIMPADGGAARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++P G  + F+
Sbjct: 104 Y-HSASEIPSTFTPDGKYVFFS 124


>gi|226227618|ref|YP_002761724.1| hypothetical protein GAU_2212 [Gemmatimonas aurantiaca T-27]
 gi|226090809|dbj|BAH39254.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 1121

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 284 IYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           +Y +       E LT    + +N     SPD   + F +DR G + L+VM ++GS+ + +
Sbjct: 88  VYRMRATGGDAEVLTQNSGVALNYQPRVSPDGKLVAFITDRRGMQNLWVMNADGSNPRAV 147

Query: 342 SQDKEASYFDPVWSPQGDLI 361
           + D  ++  +P W+P G  I
Sbjct: 148 ATDNASNMAEPAWTPDGRFI 167



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 3/85 (3%)

Query: 327 QLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            +Y M++ G D + ++Q+   +  + P  SP G L+AF         + VM  DGS  R 
Sbjct: 87  HVYRMRATGGDAEVLTQNSGVALNYQPRVSPDGKLVAFITDRRGMQNLWVMNADGSNPRA 146

Query: 386 LVED--SNLQAPTWSPSGRSLIFSR 408
           +  D  SN+  P W+P GR +I  R
Sbjct: 147 VATDNASNMAEPAWTPDGRFIIVRR 171



 Score = 39.7 bits (91), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 48/225 (21%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--INISASYSPDSSQIVFES 320
           P  +++GK+ +          IY+ D  +   +RLT   F  +  + + SPD   + F +
Sbjct: 400 PASTTDGKKIVFQALGH----IYAQDGATGTPKRLTPDTFKPLEYAPAISPDGKWVAFVT 455

Query: 321 -DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG--------------------- 358
            D   +  +Y +   G    ++++D    Y DPVW+P G                     
Sbjct: 456 FDDAARGNMYKVAITGGAPVKLTRDP-GDYVDPVWTPDGAQVVVGLGEGATARGRTITHN 514

Query: 359 ---DLIAFTKFSGEKFAIGV---MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
              DL+ F+  +G    I V   +K  G+ +        L+ P++ P GR L +  ++  
Sbjct: 515 AWYDLVRFSA-AGNDTGITVASAIKPTGAAQGNEARRQLLR-PSFGPEGR-LFYPEQRAN 571

Query: 413 DTGS----KLYSIDLNGRNE-TLINTPAY-----ASDPQWVGFMD 447
             G+     L S+ L+G ++ T +  PA      + D QWV F +
Sbjct: 572 RPGAPGGVALMSVKLDGSDKRTHLTFPAADEIVPSPDGQWVAFQE 616


>gi|116619705|ref|YP_821861.1| peptidase S41 [Candidatus Solibacter usitatus Ellin6076]
 gi|116222867|gb|ABJ81576.1| peptidase S41 [Candidatus Solibacter usitatus Ellin6076]
          Length = 1059

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 97/250 (38%), Gaps = 43/250 (17%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQ----ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           N LC +    A++ +L P+  Q       EP  SPN+ +VA+ +  D            I
Sbjct: 2   NKLCPI---AASVLFLFPALAQKSVPYFTEPSVSPNRAEVAFVSGGD------------I 46

Query: 247 DRAPKRIGNFRSMI------LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +P   G  R ++        P +S +G R      +    DIY ++L S A +R+T  
Sbjct: 47  WTSPLSGGEARLLVSHPANETRPMYSPDGTRLAFVSNRTGNGDIYVLELGSGALKRITFD 106

Query: 301 LFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                  ++S D   + F S   D  G   +Y + + G     +S D+  + F    SP 
Sbjct: 107 DSAEQLDAWSRDGKYLYFSSTAQDVAGMNDIYRVSAEGGTPVAVSADRYVNEFFSAPSPD 166

Query: 358 GDLIAFT---KFSGEKFAIGVMKKDGSQ------------ERLLVEDSNLQAPTWSPSGR 402
           G  +AFT     SG+ +  G    D S+            E+L   D     P WS  G 
Sbjct: 167 GKSLAFTARGNTSGQWWRHGHSHLDESEIWLAAWAGGAKYEKLAAGDFKCLWPMWSADGA 226

Query: 403 SLIFSRKKDG 412
            + +   + G
Sbjct: 227 RVYYMSDQGG 236



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 18/158 (11%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           FR ++LAP    +G++   +V  +          +     R+T+T       ++SPDS +
Sbjct: 316 FRDLVLAP----DGRKLAFTVHGEV---FAGGAREGGGALRMTHTAANETQIAWSPDSRR 368

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            V+ SDR+G  +LY    + S + R++ +       PVWS  G L+AF + + +   + V
Sbjct: 369 AVYVSDRDGGYRLYAYDFSTSAETRLTSEA-GDETAPVWSGDGKLLAFVRDAKQ---LCV 424

Query: 376 MKKDGSQERLLVEDSNLQAP-------TWSPSGRSLIF 406
                 Q R+L      + P        WSP  + + +
Sbjct: 425 YDTAAKQVRVLTSGRFPRPPFGSNRFYAWSPDSKWIAY 462



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 12/167 (7%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI++  L       L +         YSPD +++ F S+R G   +YV++      KRI+
Sbjct: 45  DIWTSPLSGGEARLLVSHPANETRPMYSPDGTRLAFVSNRTGNGDIYVLELGSGALKRIT 104

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-------LQAP 395
            D  A   D  WS  G  + F+  + +   +  + +  ++    V  S          AP
Sbjct: 105 FDDSAEQLD-AWSRDGKYLYFSSTAQDVAGMNDIYRVSAEGGTPVAVSADRYVNEFFSAP 163

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             SP G+SL F+ +  G+T  + +    +  +E+ I   A+A   ++
Sbjct: 164 --SPDGKSLAFTAR--GNTSGQWWRHGHSHLDESEIWLAAWAGGAKY 206


>gi|73670480|ref|YP_306495.1| hypothetical protein Mbar_A3021 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397642|gb|AAZ71915.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 499

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 1/115 (0%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           KR+G   ++ +   +   G + + S     E  D+++++       +LT+T +     SY
Sbjct: 218 KRLGTSENVGMGKDWCPLGLKIIYSANDSKEKPDLWTIEWYGTNQTQLTDTPYGEWDPSY 277

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           SPD  +IV+ SD  GK ++++    GS +  ++ +       P WSP G  I FT
Sbjct: 278 SPDGKRIVYVSDEGGKPEIWLRNIKGSYKVMLTNNIGVIDSTPRWSPDGSKIVFT 332



 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/145 (22%), Positives = 69/145 (47%), Gaps = 6/145 (4%)

Query: 271 RALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQ 327
           + ++  QK  D    ++ V+   +  +RL  +  + +   + P   +I++ + D + K  
Sbjct: 192 KKIVYTQKSGDAPSQLWIVNWDGSNKKRLGTSENVGMGKDWCPLGLKIIYSANDSKEKPD 251

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           L+ ++  G++Q +++ D     +DP +SP G  I +    G K  I +    GS + +L 
Sbjct: 252 LWTIEWYGTNQTQLT-DTPYGEWDPSYSPDGKRIVYVSDEGGKPEIWLRNIKGSYKVMLT 310

Query: 388 EDSNL--QAPTWSPSGRSLIFSRKK 410
            +  +    P WSP G  ++F+  K
Sbjct: 311 NNIGVIDSTPRWSPDGSKIVFTVHK 335



 Score = 44.7 bits (104), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 90/188 (47%), Gaps = 7/188 (3%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISA--SYSPDSSQIV 317
           L P ++++G   L +V+++ + ++ S  +++N +E   T     N+S+    +P+ ++++
Sbjct: 91  LFPVWTADGNHILYTVKRNGSDNLESYKMKANGSEIERTGIGEGNLSSFSDVNPNGTELL 150

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVM 376
                  +  LY++         ++ D + S     W   G  I +T+ SG+  + + ++
Sbjct: 151 STKSNGSQTGLYLVNLENGTVTPVADDLDKSESWGSWCRLGKKIVYTQKSGDAPSQLWIV 210

Query: 377 KKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTP 434
             DGS ++ L    N+     W P G  +I+S   D      L++I+  G N+T L +TP
Sbjct: 211 NWDGSNKKRLGTSENVGMGKDWCPLGLKIIYS-ANDSKEKPDLWTIEWYGTNQTQLTDTP 269

Query: 435 AYASDPQW 442
               DP +
Sbjct: 270 YGEWDPSY 277


>gi|163757603|ref|ZP_02164692.1| putative TolB-like protein [Hoeflea phototrophica DFL-43]
 gi|162285105|gb|EDQ35387.1| putative TolB-like protein [Hoeflea phototrophica DFL-43]
          Length = 278

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/161 (22%), Positives = 66/161 (40%), Gaps = 19/161 (11%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G       ++D+   IY++ L     E L +         YSPD + I F SDR G
Sbjct: 117 WSPDGSTLAYVGRRDDGFGIYTISLAGGDEEHLISGGGHYDGPDYSPDGAFIWFNSDRTG 176

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              L+ + + G + +++++D  A++F P  +P G  + +  ++          +D   E 
Sbjct: 177 SMDLWRIPAAGGEPQQMTRDDRANWF-PHPAPDGRSVLYLSYAPRTEG---HPRDRDVEL 232

Query: 385 LLVE---------------DSNLQAPTWSPSGRSLIFSRKK 410
            L++                  +  P WSP G    F R +
Sbjct: 233 RLLDLADQSVRTLLSLFGGQGTINVPCWSPDGSRFAFVRYQ 273


>gi|18395017|ref|NP_564146.1| unknown protein [Arabidopsis thaliana]
 gi|5263318|gb|AAD41420.1|AC007727_9 F8K7.9 [Arabidopsis thaliana]
 gi|14334812|gb|AAK59584.1| unknown protein [Arabidopsis thaliana]
 gi|24030458|gb|AAN41381.1| unknown protein [Arabidopsis thaliana]
 gi|332192016|gb|AEE30137.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 703

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 30/189 (15%)

Query: 282 MDIYSVDL----QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +DI ++++     + A ++LT T   N     SPD  +IVF S R G + LY+M +   +
Sbjct: 466 IDILAINVDAPSPATAVKKLTTTGENNAFPWPSPDGKRIVFRSARSGTKNLYIMDAEKGE 525

Query: 338 QKRISQDKEASYFDPV--WSPQGDLIAFT---KFSGEKFA-IGVMKKDGSQERLLVEDSN 391
              + +    ++ D +  WSP G+ I F    +F G     I V+  DG+  R L +  N
Sbjct: 526 SGGLFRLTNGNWNDTIATWSPDGNWIVFASNREFPGTLLMNIYVVHPDGTGLRKLAQ--N 583

Query: 392 LQA-----PTWSPSGRSLIFSRKKDGDTG------------SKLYSIDLNGRNET-LINT 433
           L       P +SP  + ++F+    G +             S++++++L+G   T L + 
Sbjct: 584 LTGLVSMHPMFSPDSKRIVFTTIYAGISAEQIGNPHFNVPSSEIFTVNLDGSGLTRLTHN 643

Query: 434 PAYASDPQW 442
                 P W
Sbjct: 644 SVEDGPPMW 652


>gi|328885898|emb|CCA59137.1| WD40 beta Propeller [Streptomyces venezuelae ATCC 10712]
          Length = 1097

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 89/220 (40%), Gaps = 24/220 (10%)

Query: 199 DGANIRYLTPSR--DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKRIGN 255
           DG   + L PS   DQ++F  R    + +V Y    D  +LR   +   +D A P+   +
Sbjct: 112 DGPVHQDLQPSALGDQLVFASRRDERRPQV-YLRAPDGSVLR---LTEGMDAANPRLTPD 167

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            RS++    F S    A  +       D++ V        RLT+T    +  + SP+  +
Sbjct: 168 GRSVV----FDS----AEAATGGGRQRDLWRVRTDGTGLTRLTDTPANEVHPTVSPEGGR 219

Query: 316 IVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-----QGDLIAFTKF-- 366
           I + SD +     Q+YV    G D  R++        +PVW+P       D+IA+T    
Sbjct: 220 IAYSSDGDPLVGRQVYVRPLAGGDATRVTDPANGRATEPVWNPVDDAENRDVIAYTATGS 279

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           SG +      + DG        +       W P G  L+F
Sbjct: 280 SGPRLRWTDGRADGPLLAGAQANWRTHGAAWLPDGDKLLF 319


>gi|168701004|ref|ZP_02733281.1| peptidase S41 [Gemmata obscuriglobus UQM 2246]
          Length = 657

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 11/123 (8%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           + P+R+     +   P FS +G+    S Q D  +D+Y++ +   A  RLT+    +   
Sbjct: 55  KNPRRLTTDLGLEAYPVFSPDGQTIAFSAQYDGNVDVYTIPVTGGAPTRLTSHPSPDTVR 114

Query: 308 SYSPDSSQIVFESDRE----GKEQLYVMQSNGS--DQKRISQDKEASYFDPVWSPQGDLI 361
            ++PD   ++F S R        QL+ +   G    Q  I    EA+Y     SP GD I
Sbjct: 115 GFTPDGKSVLFSSPRHVYSNRYTQLFTVPLTGGMPSQLPIPWGFEAAY-----SPDGDYI 169

Query: 362 AFT 364
           A+T
Sbjct: 170 AYT 172


>gi|86142431|ref|ZP_01060941.1| putative exported tricorn protease [Leeuwenhoekiella blandensis
           MED217]
 gi|85831183|gb|EAQ49640.1| putative exported tricorn protease [Leeuwenhoekiella blandensis
           MED217]
          Length = 1080

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 80/193 (41%), Gaps = 27/193 (13%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           P+R+     +   P FS +GK    S + D  MDI+SV +      RLT   + +I+  +
Sbjct: 59  PRRLTIDEGVESNPIFSPDGKTIAFSAEYDGNMDIFSVPVTGGVPTRLTFHPYPDIARDF 118

Query: 310 SPDSSQIVFESDR----EGKEQLYVMQSNGS--DQKRISQDKEASYFDPVWSPQGDLIAF 363
           +PD   +VF S R         L+ +  +G    +  I     ASY     S  G  IA+
Sbjct: 119 TPDGKSVVFASQRTLFTNRYTSLFTVPLSGGPVSELEIPNAYWASY-----SEDGKYIAY 173

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS-------------GRSLIFSRKK 410
           T    ++F      + G+Q R+ + D+  Q     P              G S+ F   +
Sbjct: 174 TPIP-DRFNQWKHYRGGTQTRIYIYDTATQEVVEIPKPAAGSNDAQPEFIGNSVYFRSDR 232

Query: 411 DGDTGSKLYSIDL 423
           DG+    LY+ DL
Sbjct: 233 DGEF--NLYAYDL 243



 Score = 37.4 bits (85), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAF 363
           ++SPDS  I + SD  G+  L++   N +D  K I+ D    Y    WSP  + IA+
Sbjct: 358 AWSPDSKHIAYFSDASGEYALHIKDQNSTDAAKAIALDGTGFYAHLHWSPDSEKIAY 414


>gi|222823241|ref|YP_002574814.1| translocation protein TolB precursor [Campylobacter lari RM2100]
 gi|222538462|gb|ACM63563.1| translocation protein TolB precursor [Campylobacter lari RM2100]
          Length = 399

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 68/124 (54%), Gaps = 3/124 (2%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P+++  +Q   Y T  +++I  +Y  + +     K I + + M++A   S +GK+ L+++
Sbjct: 176 PKWANKEQNAFYFTAYEDEIPTLYKYNMKNKNITKIIAS-KGMMVASDVSDDGKKILLTM 234

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSN 334
              +  D+Y  D+ S    ++TN + I+++ ++     +IVF SDR G   +++  + SN
Sbjct: 235 APKDQPDVYLYDVDSKNLTQITNYMGIDVNGNFVDGDKKIVFVSDRLGYPNIFMQNLDSN 294

Query: 335 GSDQ 338
            ++Q
Sbjct: 295 LTEQ 298


>gi|291006476|ref|ZP_06564449.1| amidohydrolase [Saccharopolyspora erythraea NRRL 2338]
          Length = 1067

 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 28/168 (16%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +++V ++     RLT        AS++PD S +V +   EG   LY++ + G+  +R+++
Sbjct: 16  LWAVPIRGGEGRRLTPHAMEATQASWAPDGSSVVCQVYSEGNFHLYLVPTGGT-PRRLTE 74

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL------LVEDSNLQAPTW 397
                + +P +SP G  IAF+   G ++ I +   D +  R+      + E+S    P W
Sbjct: 75  GPH-DHREPSFSPDGRRIAFSSDRGGRYGIHIF--DLATGRIAPWTAPIGEESQ---PRW 128

Query: 398 SPSG--------RSLIFSRKKDGD-------TGSKLYSIDLNGRNETL 430
           SP G         ++I +  + G+       TG++LY+   N    T+
Sbjct: 129 SPDGSRMAVVVDNAVIDAVNEAGERTRLAEATGARLYAPGWNPEGSTI 176



 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 68/169 (40%), Gaps = 8/169 (4%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   R LTP   +   +  ++P+   V    Y  E    +YL+ T     P+R+      
Sbjct: 23  GGEGRRLTPHAMEAT-QASWAPDGSSVVCQVYS-EGNFHLYLVPT--GGTPRRLTEGPHD 78

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              P FS +G+R   S  +     I+  DL +      T  +       +SPD S++   
Sbjct: 79  HREPSFSPDGRRIAFSSDRGGRYGIHIFDLATGRIAPWTAPIGEESQPRWSPDGSRMAVV 138

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            D      +    +   ++ R+++   A  + P W+P+G  IA+ +  G
Sbjct: 139 VD----NAVIDAVNEAGERTRLAEATGARLYAPGWNPEGSTIAYVRMDG 183



 Score = 40.0 bits (92), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 59/134 (44%), Gaps = 8/134 (5%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSG 368
           SPD S +V ++       L+ +   G + +R++    EA+     W+P G  +    +S 
Sbjct: 2   SPDGSTVVVDA----LSTLWAVPIRGGEGRRLTPHAMEATQAS--WAPDGSSVVCQVYSE 55

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             F + ++   G+  RL     + + P++SP GR + FS  + G  G  ++ +   GR  
Sbjct: 56  GNFHLYLVPTGGTPRRLTEGPHDHREPSFSPDGRRIAFSSDRGGRYGIHIFDL-ATGRIA 114

Query: 429 TLINTPAYASDPQW 442
                    S P+W
Sbjct: 115 PWTAPIGEESQPRW 128


>gi|15234357|ref|NP_192096.1| tolB protein-related [Arabidopsis thaliana]
 gi|4558556|gb|AAD22649.1|AC007138_13 predicted protein of unknown function [Arabidopsis thaliana]
 gi|7268571|emb|CAB80680.1| predicted protein of unknown function [Arabidopsis thaliana]
 gi|29824389|gb|AAP04154.1| unknown protein [Arabidopsis thaliana]
 gi|110742479|dbj|BAE99158.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656688|gb|AEE82088.1| tolB-related protein [Arabidopsis thaliana]
          Length = 652

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 15/95 (15%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVM-----QSNGSDQKRISQDKEASYFD--PVWSP 356
           N   S SPD   IVF S R G + LY++     +SNG   +R++   +  + D  P WSP
Sbjct: 447 NAFPSCSPDGKSIVFRSGRSGHKNLYIVDAVNGESNGGGIRRLT---DGPWIDTMPCWSP 503

Query: 357 QGDLIAFT--KFSGEK---FAIGVMKKDGSQERLL 386
           +GDLI F+  + + E    F   V++ DG+  R +
Sbjct: 504 KGDLIGFSSNRHNPENTAVFGAYVVRPDGTGLRRI 538



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 14/184 (7%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----DEAMDIYSVDLQ 290
           DI   +   T     P R+         P    +GKR  ++ ++       ++IY  DL+
Sbjct: 220 DIPENFTEYTDFPITPIRVTPSGLHCFTPAAFRDGKRIALATRRRGVNHRHIEIY--DLE 277

Query: 291 SNATERLTNTL---FINISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQ 343
           +   + +T +L   F + +   SPDS  + +   R    +G+  +  ++S  S  K +  
Sbjct: 278 NTTFQPVTESLNPSFHHYNPFVSPDSEFLGYHRFRGESTQGESIVPNIESIVSPIKTLRL 337

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
            +    F P  SP GDLIA          I V K DGS+   L++D      +WSP+ R 
Sbjct: 338 LRINGSF-PSSSPNGDLIALNSDFDINGGIKVSKSDGSKRWTLIKDRTAFYNSWSPTERH 396

Query: 404 LIFS 407
           +I++
Sbjct: 397 VIYT 400



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 1/72 (1%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSS-QIVFESDREGKEQLYVMQSNGSDQK 339
             D++S+++ ++   RLT+ + +N +A +  D S  +VF S+R G  ++Y  +S  S  +
Sbjct: 19  GFDVFSLNIATSVERRLTDGVSVNFNAQFVNDKSDDVVFVSERNGSARIYKTRSGISKPE 78

Query: 340 RISQDKEASYFD 351
           +I    E+ + D
Sbjct: 79  QIPGAPESYFHD 90


>gi|20259480|gb|AAM13860.1| unknown protein [Arabidopsis thaliana]
          Length = 657

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 15/95 (15%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVM-----QSNGSDQKRISQDKEASYFD--PVWSP 356
           N   S SPD   IVF S R G + LY++     +SNG   +R++   +  + D  P WSP
Sbjct: 452 NAFPSCSPDGKSIVFRSGRSGHKNLYIVDAVNGESNGGGIRRLT---DGPWIDTMPCWSP 508

Query: 357 QGDLIAFT--KFSGEK---FAIGVMKKDGSQERLL 386
           +GDLI F+  + + E    F   V++ DG+  R +
Sbjct: 509 KGDLIGFSSNRHNPENTAVFGAYVVRPDGTGLRRI 543



 Score = 40.4 bits (93), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 14/184 (7%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----DEAMDIYSVDLQ 290
           DI   +   T     P R+         P    +GKR  ++ ++       ++IY  DL+
Sbjct: 225 DIPENFTEYTDFPITPIRVTPSGLHCFTPAAFRDGKRIALATRRRGVNHRHIEIY--DLE 282

Query: 291 SNATERLTNTL---FINISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQ 343
           +   + +T +L   F + +   SPDS  + +   R    +G+  +  ++S  S  K +  
Sbjct: 283 NTTFQPVTESLNPSFHHYNPFVSPDSEFLGYHRFRGESTQGESIVPNIESIVSPIKTLRL 342

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
            +    F P  SP GDLIA          I V K DGS+   L++D      +WSP+ R 
Sbjct: 343 LRINGSF-PSSSPNGDLIALNSDFDINGGIKVSKSDGSKRWTLIKDRTAFYNSWSPTERH 401

Query: 404 LIFS 407
           +I++
Sbjct: 402 VIYT 405



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 1/72 (1%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSS-QIVFESDREGKEQLYVMQSNGSDQK 339
             D++S+++ ++   RLT+ + +N +A +  D S  +VF S+R G  ++Y  +S  S  +
Sbjct: 24  GFDVFSLNIATSVERRLTDGVSVNFNAQFVNDKSDDVVFVSERNGSARIYKTRSGISKPE 83

Query: 340 RISQDKEASYFD 351
           +I    E+ + D
Sbjct: 84  QIPGAPESYFHD 95


>gi|268317858|ref|YP_003291577.1| peptidase S41 [Rhodothermus marinus DSM 4252]
 gi|262335392|gb|ACY49189.1| peptidase S41 [Rhodothermus marinus DSM 4252]
          Length = 1067

 Score = 50.1 bits (118), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 12/159 (7%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           N R     P    +G++ + S Q D    ++ V +     +RLT          +SPD  
Sbjct: 15  NPRPFPRYPAIDPSGQQIVFSYQGD----LWLVPVTGGMAQRLTVHPAYEAYPRWSPDGR 70

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-----AFTKFSGE 369
           +I F SDR G + L+VM+  GS  +R++    A      W+  G L+      F +   E
Sbjct: 71  RIAFTSDRYGHDDLFVMELFGSPPRRLTY-HSADDILTDWTRDGRLLFQTRRLFVQVERE 129

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                +    G+  R+L + +  QA T SP GR L F R
Sbjct: 130 AEIHAIPDTGGTPVRIL-DATGFQA-TLSPDGRFLAFER 166


>gi|294777420|ref|ZP_06742871.1| WD40-like protein [Bacteroides vulgatus PC510]
 gi|294448488|gb|EFG17037.1| WD40-like protein [Bacteroides vulgatus PC510]
          Length = 1084

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 18/138 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + SNG    +++   +ASY   P+WSP    IAF     
Sbjct: 31  SPDGTEIAFCY----KGDIYKVPSNGGTATQLTT--QASYECSPIWSPDSKQIAFASDRN 84

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGS---------KL 418
             F + VM  DG   R L   S  + P T++  G  ++FS        S         +L
Sbjct: 85  GNFDLFVMSADGGAARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTEL 144

Query: 419 YSIDL-NGRNETLINTPA 435
           Y + +  GR E ++ TPA
Sbjct: 145 YKVPVTGGRTEQVLGTPA 162



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V        +LT       S  +SPDS QI F SDR G   L+VM ++G   +R++
Sbjct: 44  DIYKVPSNGGTATQLTTQASYECSPIWSPDSKQIAFASDRNGNFDLFVMSADGGAARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++  G+ I F+
Sbjct: 104 T-HSASEIPSTFTTDGNYILFS 124


>gi|154493795|ref|ZP_02033115.1| hypothetical protein PARMER_03138 [Parabacteroides merdae ATCC
           43184]
 gi|154086408|gb|EDN85453.1| hypothetical protein PARMER_03138 [Parabacteroides merdae ATCC
           43184]
          Length = 1079

 Score = 49.7 bits (117), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 25/162 (15%)

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RF ++NG   + S     A D+Y V        RLT+ +   +   +SPD   I F    
Sbjct: 29  RFPATNGNEIVFSY----AGDLYKVPATGGEARRLTSHVGYEMFPRFSPDGKTIAFTGQY 84

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFTK-----F 366
           +G  ++Y M   G +  R+      S+D       P      W+P G  I +       F
Sbjct: 85  DGNTEVYTMPVTGGEPLRVTYTATNSRDDLGDRMGPNNIVMTWTPDGSRIVYRNRISDGF 144

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           SG+ F   V K+ G  E + + +      ++SP G+ L ++R
Sbjct: 145 SGKLFT--VEKEGGLSEAIPLPEGGFC--SYSPDGKQLAYNR 182



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 77/160 (48%), Gaps = 15/160 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDRE 323
            S +G+R +++ + +    ++++ ++   T+ +T +   +  +A +SPD   IV+ SD  
Sbjct: 322 LSPDGERLVVTARGE----VFNLPVEKGVTKNITRSPGAHDRNAQWSPDGKFIVYISDAT 377

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G+ +LY+  + G +  ++++D +        SP    + +T        + V  K   + 
Sbjct: 378 GETELYMQDAIGGEHVQLTKDNDTYIRGFELSPDSKAVVYTDRKNRMNLLDVATK---KV 434

Query: 384 RLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             L++D     +  T+SP  + L ++R     TG+  YSI
Sbjct: 435 TTLLQDPMGEPRGVTFSPDSKWLTYTR-----TGNNEYSI 469


>gi|116624547|ref|YP_826703.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227709|gb|ABJ86418.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 903

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 15/184 (8%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISAS 308
           +R+ N   +   P  S +G     +  + +A  +DI+   +      RLT     +   S
Sbjct: 333 RRVTNTSGLTAFPTLSRDGTLLAFASDRSDAGNLDIWIQQIGGRDPFRLTTDDADDTDPS 392

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFS 367
            SPD +++ F S+R G   +YV+ S G +   +     A  F    SP G  IA+     
Sbjct: 393 ISPDGTRVAFRSERNGG-GIYVVPSMGGEAALLVPGGRAPRF----SPDGRWIAYWAGRE 447

Query: 368 GEKFAIG-----VMKKDGSQERLLVED-SNLQAPTWSPSG-RSLIFSRKKDGDTGSKLYS 420
            E    G     V++  G Q R L  D     +P WSP G R L  +R+   D     ++
Sbjct: 448 SESLLPGTARVFVIESGGGQPRQLGTDLGTATSPIWSPDGDRVLALARRDLSDPAPDWWT 507

Query: 421 IDLN 424
           + L 
Sbjct: 508 LPLQ 511


>gi|269926814|ref|YP_003323437.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermobaculum terrenum ATCC BAA-798]
 gi|269790474|gb|ACZ42615.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermobaculum terrenum ATCC BAA-798]
          Length = 594

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 6/129 (4%)

Query: 309 YSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-- 364
           +SPD S++VF  D  G E+  ++ +  +G   + I  +    +    WSP G  IA+T  
Sbjct: 64  FSPDGSRLVFIMDAGGNERHGIHGVLLDGYVHEPIQPEPNVIHLWGDWSPDGRRIAYTSN 123

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           K     F + +   DG    ++++D    + P WSP  R LI SR +  +  + +Y +DL
Sbjct: 124 KRDPRFFDVYIKSLDGGDPIMVLQDDGTNSVPAWSPDARHLIVSRSET-NLDNNIYLLDL 182

Query: 424 NGRNETLIN 432
              +  L++
Sbjct: 183 ESGDRKLLS 191


>gi|239926647|ref|ZP_04683600.1| hypothetical protein SghaA1_00330 [Streptomyces ghanaensis ATCC
           14672]
          Length = 1101

 Score = 49.7 bits (117), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 1/102 (0%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P F   G R      +    D+ +VDL + A ERLT     ++  + SPD  +I + S+ 
Sbjct: 106 PSFFPGGARVAFQSFRRGTYDLCAVDLATGAVERLTRGTQYDVEPAVSPDGRRIAYVSED 165

Query: 323 EGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +G   L  +  + G  +         SY  P W P G  +A+
Sbjct: 166 DGTSVLRCLDLATGRTRTLAGTGDGRSYRSPTWHPGGRSLAY 207



 Score = 43.5 bits (101), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   IV  SDR G  QL+    +G   ++++ D+      P  SP G  IAF   +G  
Sbjct: 387 PDGRAIVHSSDRTGVPQLWRHPLDGGPPEQLT-DRPGGALLPSVSPSGRQIAFQDEAG-- 443

Query: 371 FAIGVMKKD--GSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            A+ V+  D   S+E L V+D   +A +WSP G  L  +
Sbjct: 444 -ALHVLDLDDGTSREVLPVQDHAGKA-SWSPDGTRLSLA 480



 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 4/134 (2%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +  D    ++ V     A  RLT+        S+ P  +++ F+S R G   L  +    
Sbjct: 75  IVHDAVNALWLVPPSGGAARRLTDDAEDATWPSFFPGGARVAFQSFRRGTYDLCAVDLAT 134

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNL 392
              +R+++  +    +P  SP G  IA+         +  +     + R L    +  + 
Sbjct: 135 GAVERLTRGTQYD-VEPAVSPDGRRIAYVSEDDGTSVLRCLDLATGRTRTLAGTGDGRSY 193

Query: 393 QAPTWSPSGRSLIF 406
           ++PTW P GRSL +
Sbjct: 194 RSPTWHPGGRSLAY 207


>gi|309356046|emb|CAP37634.2| CBR-TAG-10 protein [Caenorhabditis briggsae AF16]
          Length = 451

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI+ VD   N  +RLTN+   +     SPD ++I F S R G  +LYVM ++GS+  R++
Sbjct: 190 DIFKVDRYGNFVQRLTNSPGYDAEGVVSPDGTKIAFTSIRSGDLELYVMNTDGSNLTRVT 249

Query: 343 QD---KEASYFDP 352
                   S+F P
Sbjct: 250 NTLGYDGGSFFTP 262


>gi|302381963|ref|YP_003817786.1| peptidase S41 [Brevundimonas subvibrioides ATCC 15264]
 gi|302192591|gb|ADL00163.1| peptidase S41 [Brevundimonas subvibrioides ATCC 15264]
          Length = 1113

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 114/284 (40%), Gaps = 52/284 (18%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +L  S ++VSG +                   ++ QIL +P  S +Q    Y      D+
Sbjct: 11  LLLASSALVSGGLAGEAA--------------AQSQILQQPAISADQVAFVYGG----DL 52

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             V     R  R    +G    +  AP FS +G+    + + D  +D+Y+V        R
Sbjct: 53  WTVARSGGRAARLTIGVG----IESAPIFSPDGRSIAFTGEYDGNIDVYTVPATGGQPRR 108

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKE---QLYVMQSNG----------SDQKRISQ 343
           +T     + +  +SPD S+++F S+R       QL+ + + G          +   ++S 
Sbjct: 109 ITWHPGNDAAVGWSPDGSRVLFRSNRSAASRYTQLFSVSAEGGAPDVMPLPYAHSGQMSP 168

Query: 344 DKEASYFDPVWSPQ-----GDLIAFTKFSGEKFA-IGVMKKDG--SQERLLVEDSNLQAP 395
           D  A  + P ++P      G+  A+  + G + + I V   DG  + E    E SN  +P
Sbjct: 169 DGRAVAYSP-FAPAFGFEFGNYTAWGNYRGGRASTIKVTTLDGLATVEVPQAEGSNDLSP 227

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            W   G  + F   +DG     +YS D      T    P +A+D
Sbjct: 228 VW--MGGKIYFLSDRDGPI--SIYSYD----PATRAVAPVWAND 263



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 21/172 (12%)

Query: 283 DIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KR 340
           +I +  +   +   LTNT   +  S ++SPD   + + SD  G   L+V   NG    ++
Sbjct: 338 EILTAPVTRGSVRNLTNTPGVMERSPAWSPDGQSVAYFSDESGLYALHVAPQNGEGAVRK 397

Query: 341 ISQDKEASYF-DPVWSPQGDLIAFT----------KFSGEKFAIGVMKKDGSQERLLVED 389
                E +Y+ +PVWSP    IAF+            +G    +G  +  G      V+ 
Sbjct: 398 FPLAAEPTYYANPVWSPDSKKIAFSDNHLRNWVLDTTTGRLSEVGTAQTHGG---FTVQS 454

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGD-TGSKLYSIDLNGRNETLINTPAYASDP 440
           +++    WSP  + L++SR      T   LYS+  +G +  L +    A DP
Sbjct: 455 TDM---AWSPDSKFLVYSRNGANRLTVLNLYSV-ADGSSTALTSNLGDARDP 502


>gi|226228072|ref|YP_002762178.1| hypothetical protein GAU_2666 [Gemmatimonas aurantiaca T-27]
 gi|226091263|dbj|BAH39708.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 1174

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/83 (25%), Positives = 43/83 (51%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y++ +      RLT+ +  +    +SPD  ++VF SDR G E +++M  +  D  +++
Sbjct: 79  DLYTLPIGGGKATRLTSGMAYDAQPRFSPDGKKVVFVSDRSGGENVWLMSLDQKDTTQLT 138

Query: 343 QDKEASYFDPVWSPQGDLIAFTK 365
           +     Y  P + P G  +  ++
Sbjct: 139 RGNNNMYVSPEFDPDGKYVIVSR 161


>gi|56460919|ref|YP_156200.1| HTH/TolB-like domain-containing protein [Idiomarina loihiensis
           L2TR]
 gi|56179929|gb|AAV82651.1| N-terminal winged-HTH domain fused to TolB-like domain [Idiomarina
           loihiensis L2TR]
          Length = 665

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 91/187 (48%), Gaps = 12/187 (6%)

Query: 190 KNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV----YLMDT 244
           K +L   D+DG + I  L+ S D        + N+ +   A + + + + +     L   
Sbjct: 312 KLALAGFDQDGVSKIFSLSLSSDVEALSEIIALNKNRYFLAWHPNGEAMVISDGRLLSKV 371

Query: 245 RIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTL 301
            +D +  RI N+ S   +  P+F+ +G + L S+ K +  DI  + L SN    +L N+ 
Sbjct: 372 WMDGSSSRI-NYDSYDFVQHPQFTPSGDQILFSLAKIDT-DIEQMSLTSNDQVTKLVNSN 429

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGD 359
            ++   S SPD S++ F S R+G  Q+YV+  N  + + + ++KE       PVW+   +
Sbjct: 430 TVDREPSLSPDKSKLAFISQRKGFPQVYVLDLNTQEIQLVYENKERLLGVSRPVWNANNN 489

Query: 360 LIAFTKF 366
            + F+ +
Sbjct: 490 RLGFSNY 496


>gi|255321984|ref|ZP_05363134.1| protein TolB [Campylobacter showae RM3277]
 gi|255301088|gb|EET80355.1| protein TolB [Campylobacter showae RM3277]
          Length = 424

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/250 (21%), Positives = 109/250 (43%), Gaps = 20/250 (8%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           SE V++        V+ R G NI           F      +Q    Y+ Y  ++++ +Y
Sbjct: 172 SEIVIADYTLTYQKVLVRGGLNI-----------FPKWVGADQSAFYYSDYSGKNLV-LY 219

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             D    +  K + +   M++A   S NG + L+++   +  DIY  DL S    ++TN 
Sbjct: 220 RYDVASGQKTKILDSKGGMLIASDVSQNGDKILLTMAPQDQPDIYIYDLNSKRLSQVTNY 279

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDP-VW 354
             I+++ ++     ++VF SDR G   ++    +GS  +++     + +  ++Y +  V+
Sbjct: 280 SGIDVNGNFVDGDRRVVFVSDRLGYPNVFAQNVDGSGFEQLVYHGKNNNSVSTYQNYIVY 339

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           S + D    + F    F I ++       R L        P +S  G+S++F ++  G +
Sbjct: 340 SSRED--GKSSFGTRDFNIYMISTQTDYIRQLTASGKNLYPRFSSDGQSVVFIKELGGQS 397

Query: 415 GSKLYSIDLN 424
              +  ++ N
Sbjct: 398 SLGIIRVNEN 407


>gi|255531812|ref|YP_003092184.1| hypothetical protein [Pedobacter heparinus DSM 2366]
 gi|255344796|gb|ACU04122.1| WD40 domain protein beta Propeller [Pedobacter heparinus DSM 2366]
          Length = 1060

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 89/201 (44%), Gaps = 19/201 (9%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSN----------ATERLTNTLFI 303
           N  +M +AP  S +GK      +KD   +D++  D ++           A   + +  F+
Sbjct: 296 NAGNMNVAPSISPDGKYLAFLSEKDLFGIDLFLADAKTGKIIRKLSSQVANSHIDDFNFL 355

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             + ++SPD  Q  F    +GK QL ++   NGS   R      A + +  WSP GD IA
Sbjct: 356 ESAGTWSPDGKQFAFSIFSKGKNQLMIINIDNGSVALRADMGDVAQFGNLSWSPNGDDIA 415

Query: 363 FTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT---GSKL 418
           F+    G+        K     ++  +  +  AP +S  G+ + FS  +   T    + +
Sbjct: 416 FSGMIQGQSDIFSYNLKTKKVTQITNDAYSDYAPAYSQDGKKIAFSSDRASITKNNNTAV 475

Query: 419 YSIDL---NGRNETLINTPAY 436
           +SI+L   +  ++TL + P +
Sbjct: 476 HSINLSIYDIESKTLTDIPVF 496


>gi|21244171|ref|NP_643753.1| hypothetical protein XAC3446 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21109805|gb|AAM38289.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 784

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 7/143 (4%)

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +++ S SPD + + + S   DR G   L     N   +   +     S   P WSP G  
Sbjct: 233 DLTPSLSPDGAMVAYASLTGDRAGTSILVKTTDNAYPRVLETPGPGVSDRLPAWSPDGRQ 292

Query: 361 IAFTKFSGEKFA-IGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           IAF++ + +    I +    G   S+E +  + +++ + +WSP GR+L+F          
Sbjct: 293 IAFSRQAPDGSCRIMIAAATGPAASRELVRCDGADMLSFSWSPDGRALVFGSMTGTRGAV 352

Query: 417 KLYSIDLNGRNETLINTPAYASD 439
           ++  +DL  R    ++ PA A D
Sbjct: 353 RMRRLDLATRQWQALDYPAQAGD 375



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/225 (23%), Positives = 99/225 (44%), Gaps = 13/225 (5%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRA 272
             P  SP+   VAYA+   +      L+ T  +  P+ +      +    P +S +G++ 
Sbjct: 234 LTPSLSPDGAMVAYASLTGDRAGTSILVKTTDNAYPRVLETPGPGVSDRLPAWSPDGRQI 293

Query: 273 LISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQ 327
             S Q  +    + I +    + + E +       +S S+SPD   +VF S     G  +
Sbjct: 294 AFSRQAPDGSCRIMIAAATGPAASRELVRCDGADMLSFSWSPDGRALVFGSMTGTRGAVR 353

Query: 328 LYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +  +       + +    +A  FD  P +SP G+ I F +         +  + G  ERL
Sbjct: 354 MRRLDLATRQWQALDYPAQAGDFDYAPRYSPDGNWIVFLRNPQLGDLWRIPAEGGVAERL 413

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             ++++++  +W P G  LIF R+ D +  ++LY +DL  R+ +L
Sbjct: 414 THDNADIRGWSWLPDGSGLIFGRRVDSE--ARLYRLDL--RDHSL 454


>gi|291434963|ref|ZP_06574353.1| amidohydrolase [Streptomyces ghanaensis ATCC 14672]
 gi|291337858|gb|EFE64814.1| amidohydrolase [Streptomyces ghanaensis ATCC 14672]
          Length = 1084

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 1/102 (0%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P F   G R      +    D+ +VDL + A ERLT     ++  + SPD  +I + S+ 
Sbjct: 89  PSFFPGGARVAFQSFRRGTYDLCAVDLATGAVERLTRGTQYDVEPAVSPDGRRIAYVSED 148

Query: 323 EGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +G   L  +  + G  +         SY  P W P G  +A+
Sbjct: 149 DGTSVLRCLDLATGRTRTLAGTGDGRSYRSPTWHPGGRSLAY 190



 Score = 43.5 bits (101), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   IV  SDR G  QL+    +G   ++++ D+      P  SP G  IAF   +G  
Sbjct: 370 PDGRAIVHSSDRTGVPQLWRHPLDGGPPEQLT-DRPGGALLPSVSPSGRQIAFQDEAG-- 426

Query: 371 FAIGVMKKD--GSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            A+ V+  D   S+E L V+D   +A +WSP G  L  +
Sbjct: 427 -ALHVLDLDDGTSREVLPVQDHAGKA-SWSPDGTRLSLA 463



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 4/134 (2%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +  D    ++ V     A  RLT+        S+ P  +++ F+S R G   L  +    
Sbjct: 58  IVHDAVNALWLVPPSGGAARRLTDDAEDATWPSFFPGGARVAFQSFRRGTYDLCAVDLAT 117

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNL 392
              +R+++  +    +P  SP G  IA+         +  +     + R L    +  + 
Sbjct: 118 GAVERLTRGTQYD-VEPAVSPDGRRIAYVSEDDGTSVLRCLDLATGRTRTLAGTGDGRSY 176

Query: 393 QAPTWSPSGRSLIF 406
           ++PTW P GRSL +
Sbjct: 177 RSPTWHPGGRSLAY 190


>gi|326522999|dbj|BAJ88545.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 706

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 14/139 (10%)

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+   IY V ++     +LT     N   S SPD   +VF S R G + LY+M +   +
Sbjct: 473 NDDDGSIYQVSIK-----KLTVGGENNAFPSPSPDGKWLVFRSGRSGHKNLYIMDAEEGE 527

Query: 338 QKRISQDKEASYFDPV--WSPQGDLIAFT----KFSGEKFAIGVMKKDGSQERLLVEDSN 391
              I +  +  + D +  WSP G+ IAF        G  FAI ++  + +  R +V  ++
Sbjct: 528 AGGIRRLTDGPWTDTMCNWSPDGEWIAFASDRHNPGGGSFAIYMVHPNSTGLRRVVHSAD 587

Query: 392 ---LQAPTWSPSGRSLIFS 407
                 P +SP  + ++F+
Sbjct: 588 GGRTNHPWFSPDSKRMVFT 606


>gi|268532750|ref|XP_002631503.1| C. briggsae CBR-TAG-10 protein [Caenorhabditis briggsae]
          Length = 424

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 3/73 (4%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI+ VD   N  +RLTN+   +     SPD ++I F S R G  +LYVM ++GS+  R++
Sbjct: 191 DIFKVDRYGNFVQRLTNSPGYDAEGVVSPDGTKIAFTSIRSGDLELYVMNTDGSNLTRVT 250

Query: 343 QD---KEASYFDP 352
                   S+F P
Sbjct: 251 NTLGYDGGSFFTP 263


>gi|262196570|ref|YP_003267779.1| hypothetical protein Hoch_3384 [Haliangium ochraceum DSM 14365]
 gi|262079917|gb|ACY15886.1| WD40 domain protein beta Propeller [Haliangium ochraceum DSM 14365]
          Length = 398

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 17/162 (10%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ----------SNGSDQKRISQDK 345
           RLT+  F +   ++S D S +VF S+R G   ++  +          + G+  + I+ ++
Sbjct: 144 RLTSGDFEDRDPAWSADGSAVVFSSNRGGSFAIWRQELSMSDYGWPIAAGAPSQLIASER 203

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            A  F P  +P G  IA+T+   E  A  +      + + L E  +   P WSP GR L 
Sbjct: 204 AA--FHPAPAPDGSAIAYTEADLESGASEIWLWSAGERQRLSEGPSDSTPAWSPDGRRLA 261

Query: 406 FSR--KKDGDTGS-KLYSIDLNGRNET-LINTP-AYASDPQW 442
           F+   +++G      L++++ +G     LI  P A  + P W
Sbjct: 262 FAGLVEREGQPPDVDLFTMNADGSGRAPLIAEPLALQTHPVW 303



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 18/162 (11%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYF 350
           R+      + S S+SPD   IVF S R G+E      L+++ +    Q R     +    
Sbjct: 95  RIAQVPVRDNSPSWSPDGRWIVFASSR-GREDMMQTSLWLVAARLDAQPRRLTSGDFEDR 153

Query: 351 DPVWSPQGDLIAFTKFSGEKFAI----------GVMKKDGSQERLLVEDSNLQAPTWSPS 400
           DP WS  G  + F+   G  FAI          G     G+  +L+  +     P  +P 
Sbjct: 154 DPAWSADGSAVVFSSNRGGSFAIWRQELSMSDYGWPIAAGAPSQLIASERAAFHPAPAPD 213

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           G ++ ++ + D ++G+    +   G  + L   P+  S P W
Sbjct: 214 GSAIAYT-EADLESGASEIWLWSAGERQRLSEGPSD-STPAW 253


>gi|125546375|gb|EAY92514.1| hypothetical protein OsI_14253 [Oryza sativa Indica Group]
          Length = 682

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 9/129 (6%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D ++ + ++LT     N   S SPD   +VF S R G + LY++ +   +   I +  E 
Sbjct: 461 DDETISMKKLTVGGENNAFPSPSPDGKWVVFRSGRSGNKNLYIIDAEDGEAGGIRRLTEG 520

Query: 348 SYFDPV--WSPQGDLIAFTK----FSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWS 398
            + D +  WSP G+ IAF           FAI ++  +G+  R +V   +      P + 
Sbjct: 521 PWSDTMCNWSPDGEWIAFASDRHAPGSGSFAIYMVHPNGTGLRRVVHSGDGGRTNHPWFG 580

Query: 399 PSGRSLIFS 407
           P  +SL+F+
Sbjct: 581 PDSKSLVFT 589



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 29/163 (17%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTNTLFINISASYSPDSSQIVFE 319
           P  S +GK  +    +    ++Y +D +   +    RLT   + +   ++SPD   I F 
Sbjct: 480 PSPSPDGKWVVFRSGRSGNKNLYIIDAEDGEAGGIRRLTEGPWSDTMCNWSPDGEWIAFA 539

Query: 320 SDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAFT---------- 364
           SDR     G   +Y++  NG+  +R+    +    +  W  P    + FT          
Sbjct: 540 SDRHAPGSGSFAIYMVHPNGTGLRRVVHSGDGGRTNHPWFGPDSKSLVFTSDYAAVSAEP 599

Query: 365 -------KFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSP 399
                  +  GE F + +   DGS  R L  +S     P+W+P
Sbjct: 600 VSNPHHYQPYGEIFTVHI---DGSNIRRLTHNSFEDGTPSWTP 639


>gi|153004922|ref|YP_001379247.1| WD40 domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152028495|gb|ABS26263.1| WD40 domain protein beta Propeller [Anaeromyxobacter sp. Fw109-5]
          Length = 1206

 Score = 49.7 bits (117), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 5/131 (3%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +  PR S +G+R    +Q++   D+     +     R+T+   ++ S +++PD   ++F 
Sbjct: 481 VYQPRVSPDGRRIAFELQEEGRRDL--ALWEDGRVTRITDDGALDTSPAWTPDGRHLLFA 538

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-- 377
           SDR G   LY  ++   D  +++ + E     P  SP G  IAF  +S   + +  +   
Sbjct: 539 SDRGGLYNLYAWEAATGDVAQVT-NVETGALQPDVSPDGRTIAFLLYSRAGYDVATIPFA 597

Query: 378 KDGSQERLLVE 388
            +G  E L  E
Sbjct: 598 PEGWLEPLPAE 608


>gi|145237008|ref|XP_001391151.1| hypothetical protein ANI_1_1414064 [Aspergillus niger CBS 513.88]
 gi|134075616|emb|CAK39282.1| unnamed protein product [Aspergillus niger]
          Length = 681

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 47/236 (19%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           G+KG      +F+   +  G   + L + + DG+N R L  S     +   FSP+ + + 
Sbjct: 64  GQKG------VFMMNRIAPGT--SELYIANTDGSNERPLL-SNPVYEYHASFSPDVEWIT 114

Query: 228 YATY----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK-RALISVQKDEAM 282
           + +      + DI RV    + +           S++++P    NG+  A +S   +   
Sbjct: 115 FTSERNGDGNSDIYRVRTNGSDLQELVATPAVEDSVVISP----NGRLAAYVSTANNMKA 170

Query: 283 DIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQIVFESDRE---------- 323
           +I+ +DLQ+ A   LTNT     ++S         +SPD   I F SDR           
Sbjct: 171 NIWILDLQTGAQWNLTNTPTTAANSSLMESYLRPAWSPDGEWIAFSSDRNTQWDGHGVPT 230

Query: 324 -----GKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                G E      LY ++ NGSD ++I      S   P WS  G  I + + + E
Sbjct: 231 FLGRTGWETTQELSLYAIRPNGSDFRQIISKPYYSLGSPKWSADGKRIVYYEMTRE 286



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 83/185 (44%), Gaps = 35/185 (18%)

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEAS 348
           SN    L+N ++    AS+SPD   I F S+R  +G   +Y +++NGSD + +     A 
Sbjct: 89  SNERPLLSNPVY-EYHASFSPDVEWITFTSERNGDGNSDIYRVRTNGSDLQELVA-TPAV 146

Query: 349 YFDPVWSPQGDLIAFTKFSGE-KFAIGVMK-KDGSQERLL-----VEDSNLQA----PTW 397
               V SP G L A+   +   K  I ++  + G+Q  L        +S+L      P W
Sbjct: 147 EDSVVISPNGRLAAYVSTANNMKANIWILDLQTGAQWNLTNTPTTAANSSLMESYLRPAW 206

Query: 398 SPSGRSLIFSRKKD------------GDTGSK------LYSIDLNGRN-ETLINTPAYA- 437
           SP G  + FS  ++            G TG +      LY+I  NG +   +I+ P Y+ 
Sbjct: 207 SPDGEWIAFSSDRNTQWDGHGVPTFLGRTGWETTQELSLYAIRPNGSDFRQIISKPYYSL 266

Query: 438 SDPQW 442
             P+W
Sbjct: 267 GSPKW 271


>gi|255531799|ref|YP_003092171.1| amidohydrolase [Pedobacter heparinus DSM 2366]
 gi|255344783|gb|ACU04109.1| amidohydrolase [Pedobacter heparinus DSM 2366]
          Length = 1084

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 27/183 (14%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y + +   +   L++    +I   +SP+   I + SD+ G + +++M  +GS +++IS
Sbjct: 71  DLYIMPISGGSAVLLSSGPAWDIQPRFSPNGRYISYTSDKSGADNIWIMNRDGSGKRQIS 130

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMKKDGSQERLLVEDSNLQ- 393
           ++      +  W P  + LIA   F+       GE +   +   +G Q   L +  N Q 
Sbjct: 131 KETFRLLNNATWMPNSEYLIARKHFTGTRSLGAGEMWMYSIYGGEGVQ---LTKRKNDQQ 187

Query: 394 ---APTWSPSGRSLIFSR--------KKDGDTGSKLYSI---DL-NGRNETLINTPAYAS 438
               P  SP G+ L FS         +   D    +Y+I   DL +G+  +LI  P  A+
Sbjct: 188 DAGEPNVSPDGKYLYFSEDMSPGPNFEYSKDPNGMIYAIRQLDLTSGKITSLIAQPGGAA 247

Query: 439 DPQ 441
            PQ
Sbjct: 248 RPQ 250



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 67/161 (41%), Gaps = 15/161 (9%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           FEP  S + + V Y T+ DE    +   D +  +    +   +    +P FS+ G + + 
Sbjct: 405 FEPEISADGKSVIYTTWSDEFKGAIKKTDLKSGKT-VTLTTEKGFYYSPSFSNKGDKIVF 463

Query: 275 --SVQKD-------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
              V  D           I+++         +T      I   ++ D S+I F+S  +GK
Sbjct: 464 RKGVGNDVLGYAFGRGTGIFTMPASGGPKTLITEN---GIRPKFNADDSRIYFQSSEDGK 520

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +    +  NG++++       A+ F P  SP G  +AFT+ 
Sbjct: 521 KAFKSIDLNGANERTHYTSTYATQFAP--SPDGKWMAFTEL 559



 Score = 40.8 bits (94), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 21/180 (11%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +Y  DL +   ER++  +        S D   +++ +  + + +  + +++    K ++ 
Sbjct: 384 LYKKDLPNGLPERVSKGIDFEFEPEISADGKSVIYTTWSD-EFKGAIKKTDLKSGKTVTL 442

Query: 344 DKEAS-YFDPVWSPQGDLIAFTKFSGE---KFAIG------VMKKDGSQERLLVEDSNLQ 393
             E   Y+ P +S +GD I F K  G     +A G       M   G  + L+ E  N  
Sbjct: 443 TTEKGFYYSPSFSNKGDKIVFRKGVGNDVLGYAFGRGTGIFTMPASGGPKTLITE--NGI 500

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS------DPQWVGFMD 447
            P ++     + F   +DG    K  SIDLNG NE    T  YA+      D +W+ F +
Sbjct: 501 RPKFNADDSRIYFQSSEDGKKAFK--SIDLNGANERTHYTSTYATQFAPSPDGKWMAFTE 558


>gi|332662796|ref|YP_004445584.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
 gi|332331610|gb|AEE48711.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
          Length = 1069

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 12/155 (7%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           ++  P  +++G +   S Q D    I++V        RLT       +  YSPD  +I F
Sbjct: 24  LLRHPAINNDGSQIAFSFQGD----IWTVASSGGKATRLTIHEAYEGNPMYSPDGKKIAF 79

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-----AFTKFSGEKFAI 373
              R G   ++VM + G   KR++           W+    ++      F +  G     
Sbjct: 80  SGARYGNNDVFVMPAEGGSPKRLTYHSAGDNV-AGWASNSQIVFSTNREFRQIGGHPEIY 138

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           G+    G++ RLL  D     P++SP GR +   R
Sbjct: 139 GINASGGTESRLL--DIEAYDPSYSPDGRFIALVR 171


>gi|284042934|ref|YP_003393274.1| hypothetical protein Cwoe_1471 [Conexibacter woesei DSM 14684]
 gi|283947155|gb|ADB49899.1| hypothetical protein Cwoe_1471 [Conexibacter woesei DSM 14684]
          Length = 311

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 43/247 (17%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGK----RAL 273
           +PN + +A+A              TRI RA  R  + R +   + P  S +G+    R  
Sbjct: 82  TPNGRTIAFA------------RGTRIFRAGPRGADARQVGGGMTPLVSPDGRAVTWRGE 129

Query: 274 ISVQKDEA------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE- 326
           I VQ+ +       +  +++  ++N   R T     + S+++    +++V ++ R G E 
Sbjct: 130 IQVQQCDPFGGCAQVQTFALFRRANGEARPTVVEAYSYSSAWW--GTRLVSQNTRRGAEA 187

Query: 327 -QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---FSGE-----KFAIGVMK 377
            ++ ++  +G   + ++ D   SY  P  SP G L+A       +G+     K  + +  
Sbjct: 188 DEISLLDGDGRPVRSLTNDPARSYTSPALSPDGSLLAAISEPLPTGDADPTFKGRVELFD 247

Query: 378 KD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            D G++ R+L E +    P++SP GR L F+R +D      LY +   G     +     
Sbjct: 248 PDTGARVRVLTESATDDVPSFSPDGRQLAFNRGRD------LYVVATRGGRARRVAANFV 301

Query: 437 ASDPQWV 443
            S P W 
Sbjct: 302 LSGPSWA 308


>gi|190575753|ref|YP_001973598.1| putative transcriptional regulator [Stenotrophomonas maltophilia
           K279a]
 gi|190013675|emb|CAQ47310.1| putative transcriptional regulator [Stenotrophomonas maltophilia
           K279a]
          Length = 776

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 10/154 (6%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           APR+S +GK  L+ V+  +  D++ +       E+LTN        ++  D   IVF   
Sbjct: 370 APRYSPDGK-WLVFVRNPQMGDLWRMPAGGGELEQLTNESAEQRGWAWLGDGRSIVFGRR 428

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVW---SPQGDLIAFTKFSGEKFAIGVMKK 378
            + + +LY +      ++R  +D  A   D  W   S  GD++AF     +     V   
Sbjct: 429 VDSEVRLYYLDV----ERRTLRD--AGLDDAQWPAVSRHGDVLAFVHRRAQFGVFKVPMA 482

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            GS ERL         P  +P GR L+F+  + G
Sbjct: 483 GGSAERLFASSGRDGQPMAAPDGRQLVFTSDRSG 516



 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 7/118 (5%)

Query: 297 LTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRIS-QDKEASYFDP 352
           +T T       + SPD SQ+ +E    D  G   + V  S  +  ++++   K AS   P
Sbjct: 217 ITATSGFETYPTLSPDGSQVAYEGANEDGAGGGVIKVQTSGNAPARQLALPPKGASDRFP 276

Query: 353 VWSPQGDLIAFTKF---SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            WSP G  IAF +F    G +  I      G ++    + + L +  W+P GR L+F 
Sbjct: 277 SWSPDGREIAFARFGADGGCQVLIASATGGGVRQATRCDGTELLSFDWTPDGRGLVFG 334


>gi|228470863|ref|ZP_04055710.1| MdsD protein [Porphyromonas uenonis 60-3]
 gi|228307430|gb|EEK16440.1| MdsD protein [Porphyromonas uenonis 60-3]
          Length = 1097

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 40/83 (48%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY VD        LT +       ++SPD  +I F S+R+G   +Y M + G D KRI+
Sbjct: 53  DIYIVDAIGGEARLLTGSDGYESHPTWSPDGKRIAFMSNRDGHRSIYTMSALGGDVKRIT 112

Query: 343 QDKEASYFDPVWSPQGDLIAFTK 365
                S+    ++P G  I  ++
Sbjct: 113 HHSGNSHTVECYTPDGRFIIMSE 135



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 69/168 (41%), Gaps = 44/168 (26%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           SS+GK+    ++ D    +Y   ++   T+R+T +     S ++SPDS  +V++S R+GK
Sbjct: 334 SSDGKQLAFIMRGD----VYVTSVEHGTTKRITQSSGAEESVTWSPDSKTLVYDSRRDGK 389

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFD-------------------PVWSPQGDLIAFTKF 366
             LY        +  I+ DKE  +                     P +SP G  IAF   
Sbjct: 390 HILY--------KATIASDKELDFASATIIKEEPLMPECKMEQALPQYSPDGKQIAFV-- 439

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIF 406
            G++  I     D + ++L    S    P         WSP  R + F
Sbjct: 440 -GDRKCI--YTYDIASKKLTQVTSGKDQPEMHGYISFEWSPDSRWIAF 484



 Score = 37.0 bits (84), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP G+ IAF  + G+ + +  +   G + RLL   D     PTWSP G+ + F   +DG
Sbjct: 40  SPDGNQIAFC-YQGDIYIVDAI---GGEARLLTGSDGYESHPTWSPDGKRIAFMSNRDG 94


>gi|323360025|ref|YP_004226421.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Microbacterium
           testaceum StLB037]
 gi|323276396|dbj|BAJ76541.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Microbacterium
           testaceum StLB037]
          Length = 656

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 10/129 (7%)

Query: 263 PRFSSNGKRALISVQK-DEAMD-----IYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P  SS+G  A+ +  + D A D     ++ VDL      RLT  + ++ S   SPD S I
Sbjct: 15  PVLSSDGGFAVFATSRPDLAADRGVGQLWRVDLPDGTPRRLTRGV-VDRSPRLSPDDSTI 73

Query: 317 VF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            F  +D  G+ Q++V+ + G +  ++++ +     D  WSP G  +AF+    E    G 
Sbjct: 74  AFLRADERGRAQVFVVSATGGEPVQVTE-QHGGVTDLAWSPDGARLAFSARVPEPGRYGT 132

Query: 376 MK-KDGSQE 383
           ++ +D + E
Sbjct: 133 VEGRDAAAE 141


>gi|315127820|ref|YP_004069823.1| TolB domain protein [Pseudoalteromonas sp. SM9913]
 gi|315016334|gb|ADT69672.1| TolB domain protein [Pseudoalteromonas sp. SM9913]
          Length = 691

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 8/118 (6%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           YS    ++VF S+  G  +L+    +G+ +K+++ +  A+ ++PVWSP G+ IAF     
Sbjct: 442 YSKARKKLVFVSNESGSMELWTANQDGTSRKQLT-NLSANIYNPVWSPDGNYIAFVASHL 500

Query: 369 EKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            + A+ +      S + L    S    P+W+   +SL+ +  +       +Y  DLNG
Sbjct: 501 GEHALYLYDFNTQSSQSLPTGFSYHGKPSWAADSKSLLVANDQ------YVYRFDLNG 552


>gi|254294964|ref|YP_003060987.1| hypothetical protein Hbal_2615 [Hirschia baltica ATCC 49814]
 gi|254043495|gb|ACT60290.1| WD40 domain protein beta Propeller [Hirschia baltica ATCC 49814]
          Length = 648

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 32/157 (20%)

Query: 262 APRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---------ISASYSP 311
           A   S +GK+ A +S ++    +++  DL++     LT    I          +  S+SP
Sbjct: 135 AVSISPDGKKIAFVSTREGYFSNVWIKDLETGELTNLTGAEHIQGDPMLPNSFLRPSWSP 194

Query: 312 DSSQIVFESDRE----------GKEQ-----LYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           D   I F SDR           G E      +YV+ ++G + +R+    E SY  P WSP
Sbjct: 195 DGKWIAFSSDRNTNWRGHDYPIGWEHTQELSIYVIGADGQNFRRLVSKPEMSYGSPSWSP 254

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            G  I+F       +AI      G++   LV+D+  Q
Sbjct: 255 DGKRISF-------YAITTEDTWGARRYNLVQDTTSQ 284



 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 62/143 (43%), Gaps = 27/143 (18%)

Query: 306 SASYSPDSSQIVFESDREG-------KEQLYVMQSNGSDQKRISQDK--EASYFDPVWSP 356
           + S SPD  +I F S REG       K+      +N +  + I  D     S+  P WSP
Sbjct: 135 AVSISPDGKKIAFVSTREGYFSNVWIKDLETGELTNLTGAEHIQGDPMLPNSFLRPSWSP 194

Query: 357 QGDLIAF-----TKFSGEKFAIG----------VMKKDGSQERLLVEDSNLQ--APTWSP 399
            G  IAF     T + G  + IG          V+  DG   R LV    +   +P+WSP
Sbjct: 195 DGKWIAFSSDRNTNWRGHDYPIGWEHTQELSIYVIGADGQNFRRLVSKPEMSYGSPSWSP 254

Query: 400 SGRSLIFSRKKDGDT-GSKLYSI 421
            G+ + F      DT G++ Y++
Sbjct: 255 DGKRISFYAITTEDTWGARRYNL 277



 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 94/233 (40%), Gaps = 43/233 (18%)

Query: 192 SLCVMDRDGANIR-------------YLTPSRDQILFEPRFSPNQQKVAYAT----YDDE 234
           +L V+DRDG N R             YL  +     ++P +S + + V +      Y   
Sbjct: 405 NLVVLDRDGKNPRTIYEVTKESTKTPYLLGTGLVGAYQPSWSRDGEWVTFCVGTFFYKRY 464

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D     +M  R     + + +       P FS++GK  +  V   E + +   +++ +  
Sbjct: 465 DAPARVMMVRRDGTGLREVTHGEENAGFPSFSADGKEIVYRVWDKENIGLRIYNIEKDEH 524

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDP 352
             LT T   N+ A YSPD ++I+F + R G     LY ++ +G+D  R++          
Sbjct: 525 RVLTET-GDNLPA-YSPDGTRILF-TRRHGHADYDLYTIKPDGTDLVRLTTHPSGDGH-A 580

Query: 353 VWSPQGDLIAFTKFSGEKFA-----------------IGVMKKDGSQERLLVE 388
           VWS  G  I    +SG  +                  I VM  DGS + ++ +
Sbjct: 581 VWSNDGSKIM---WSGSVYGFRDEAALYDDTFQQYGQIWVMNADGSNKHMVTD 630



 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 69/157 (43%), Gaps = 10/157 (6%)

Query: 284 IYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVF------ESDREGKEQLYVMQSNGS 336
           IY V  +S  T  L  T  +     S+S D   + F          +   ++ +++ +G+
Sbjct: 419 IYEVTKESTKTPYLLGTGLVGAYQPSWSRDGEWVTFCVGTFFYKRYDAPARVMMVRRDGT 478

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             + ++  +E + F P +S  G  I +  +  E   + +   +  + R+L E  +   P 
Sbjct: 479 GLREVTHGEENAGF-PSFSADGKEIVYRVWDKENIGLRIYNIEKDEHRVLTETGD-NLPA 536

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +SP G  ++F+R+  G     LY+I  +G +   + T
Sbjct: 537 YSPDGTRILFTRRH-GHADYDLYTIKPDGTDLVRLTT 572


>gi|73670801|ref|YP_306816.1| hypothetical protein Mbar_A3363 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397963|gb|AAZ72236.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 565

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 16/130 (12%)

Query: 308 SYSPDSSQIVFESDREGKEQL--YVMQSNGSDQK----RISQDKEASYFDPVWSPQGDLI 361
           S SPD  +I+F S   G   L  Y+  ++GS  +          E       W P G L+
Sbjct: 254 SVSPDKRKIIFVSGLPGSHNLQTYISNTDGSKLRGNVSHYGDTDEHILTKEYWQPNGSLL 313

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                  +  ++ +++ + + +RLL E  N   P W P G+ ++F   K+     KLYSI
Sbjct: 314 ----LVNQDGSLYIVEGNENNKRLLYE-GNATNPQWFPDGKKILFVTNKN-----KLYSI 363

Query: 422 DLNGRNETLI 431
           +++G N T I
Sbjct: 364 NVDGTNLTFI 373


>gi|218921788|emb|CAW30775.1| P46GA2.1B [Haemonchus contortus]
          Length = 354

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 106/245 (43%), Gaps = 40/245 (16%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +  P+   IL+   F   +   A+  + D DI +V      +D+  K         ++P 
Sbjct: 76  FFYPNSVDILYSGNFHKVRSGHAWDVFPDYDIFKVNEYGNVLDQLTKNKVYDSEAFISP- 134

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-- 322
              +GK+ + + ++   +D++  D+      +LTNT   +  AS+SPD  +IVF + R  
Sbjct: 135 ---DGKKIVYTRKQSGDLDLWITDINGALKIQLTNTKGYDGGASFSPDGEKIVFHASRPT 191

Query: 323 ------------------EGKEQLYVMQSN-----GSDQKRI-SQDKEASYFDPVWSPQG 358
                               K +LYVM++N     G+ ++ + ++ + A  + P + P  
Sbjct: 192 TKDKIDIYDHLLKNDLVATNKMELYVMKANTVCGDGTGERILFNRARGALDWTPYYHPDN 251

Query: 359 DLIAFT----KFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQA-PTWSPSGRSLIFSRK--- 409
             I F+         ++ + ++ +DG+  ER+        A P +S  G+ +++S     
Sbjct: 252 KRIIFSSNMNSTKSNEYHLYIVNEDGTGLERVTFGSGYFNAFPVFSHDGKKVVWSSNRGS 311

Query: 410 -KDGD 413
            K+GD
Sbjct: 312 TKEGD 316


>gi|332300275|ref|YP_004442196.1| peptidase S41 [Porphyromonas asaccharolytica DSM 20707]
 gi|332177338|gb|AEE13028.1| peptidase S41 [Porphyromonas asaccharolytica DSM 20707]
          Length = 1095

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 40/83 (48%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY VD        LT +       ++SPD  +I F S+R+G   +Y M + G D KRI+
Sbjct: 53  DIYIVDAIGGEARLLTGSDGYESHPTWSPDGKRIAFMSNRDGHRSIYTMSALGGDVKRIT 112

Query: 343 QDKEASYFDPVWSPQGDLIAFTK 365
                S+    ++P G  I  ++
Sbjct: 113 HHSGNSHTVECYTPDGRFIIMSE 135



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 34/163 (20%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           SS+GK+    ++ D    +Y   ++   T+R+T +     S ++SPDS  +V++S R+GK
Sbjct: 334 SSDGKQLAFIMRGD----VYVTSVEHGTTKRITQSAGAEESVTWSPDSKTLVYDSRRDGK 389

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFD-------------------PVWSPQGDLIAFTKF 366
             LY        +  I+ DKE  +                     P +SP G LIAF   
Sbjct: 390 HILY--------KATIASDKELDFASATIIKEEPLMPECKMEQALPQYSPDGKLIAFVGD 441

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIF 406
               +   V  K  +Q     +   +    +  WSP  R + F
Sbjct: 442 RKRIYTYNVESKKLTQVTSGKDQPEMHGYISYEWSPDSRWIAF 484



 Score = 37.0 bits (84), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP G+ IAF  + G+ + +  +   G + RLL   D     PTWSP G+ + F   +DG
Sbjct: 40  SPDGNQIAFC-YQGDIYIVDAI---GGEARLLTGSDGYESHPTWSPDGKRIAFMSNRDG 94


>gi|313886322|ref|ZP_07820047.1| WD40-like protein [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924191|gb|EFR34975.1| WD40-like protein [Porphyromonas asaccharolytica PR426713P-I]
          Length = 1097

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 40/83 (48%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY VD        LT +       ++SPD  +I F S+R+G   +Y M + G D KRI+
Sbjct: 53  DIYIVDAIGGEARLLTGSDGYESHPTWSPDGKRIAFMSNRDGHRSIYTMSALGGDVKRIT 112

Query: 343 QDKEASYFDPVWSPQGDLIAFTK 365
                S+    ++P G  I  ++
Sbjct: 113 HHSGNSHTVECYTPDGRFIIMSE 135



 Score = 45.1 bits (105), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 34/164 (20%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           SS+GK+    ++ D    +Y   ++   T+R+T +     S ++SPDS  +V++S R+GK
Sbjct: 334 SSDGKQLAFIMRGD----VYVTSVEHGTTKRITQSAGAEESVTWSPDSKTLVYDSRRDGK 389

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFD-------------------PVWSPQGDLIAFTKF 366
             LY        +  I+ DKE  +                     P +SP G LIAF   
Sbjct: 390 HILY--------KATIASDKELDFASATIIKEEPLMPECKMEQALPQYSPDGKLIAFVGD 441

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFS 407
               +   V  K  +Q     +   +    +  WSP  R + F 
Sbjct: 442 RKRIYTYNVESKKLTQVTSGKDQPEMHGYISYEWSPDSRWIAFG 485



 Score = 37.0 bits (84), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP G+ IAF  + G+ + +  +   G + RLL   D     PTWSP G+ + F   +DG
Sbjct: 40  SPDGNQIAFC-YQGDIYIVDAI---GGEARLLTGSDGYESHPTWSPDGKRIAFMSNRDG 94


>gi|88706318|ref|ZP_01104024.1| secreted protein [Congregibacter litoralis KT71]
 gi|88699469|gb|EAQ96582.1| secreted protein [Congregibacter litoralis KT71]
          Length = 818

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 7/95 (7%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRK 409
           DP  SP G+ IAF      +  + ++  D    R L    ++ + P WS  GR L F R 
Sbjct: 56  DPAPSPDGESIAFAA----QGWLWLLDLDSGIARRLTRGGDVDSRPRWSADGRRLAFVRD 111

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              DT   L  +D+ G +ET+INTPA   DP++ G
Sbjct: 112 TGKDT--SLVVMDVAGGDETIINTPAIDLDPEFSG 144


>gi|262199346|ref|YP_003270555.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haliangium ochraceum DSM 14365]
 gi|262082693|gb|ACY18662.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haliangium ochraceum DSM 14365]
          Length = 656

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 83/181 (45%), Gaps = 7/181 (3%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G R   +        ++ VD       +LT    +  S ++SPD + + + +DR
Sbjct: 74  PALSPDGSRVAFATDTTGKPQLWVVDAAGGWPTQLTFGESVT-SHAWSPDGAWLFYGADR 132

Query: 323 EG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKK 378
            G  +E  Y++  +G  ++ +    +A      +SP G  IA+  T+ +G  F + V+  
Sbjct: 133 GGNEREGFYLISPDGLRERELLAPSDAFRVFGGFSPDGTRIAYSTTERNGLDFDVHVLDL 192

Query: 379 DGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              ++R +   S      +W P G++L+ S  + G+ G+ L+ ++L     T +  P  A
Sbjct: 193 RSGEDREVYRGSMGFFVSSWRPDGQALLLSEVR-GEDGNDLHLLELASGELTPLYQPEVA 251

Query: 438 S 438
           +
Sbjct: 252 A 252


>gi|224023468|ref|ZP_03641834.1| hypothetical protein BACCOPRO_00170 [Bacteroides coprophilus DSM
           18228]
 gi|224016690|gb|EEF74702.1| hypothetical protein BACCOPRO_00170 [Bacteroides coprophilus DSM
           18228]
          Length = 1106

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 68/137 (49%), Gaps = 16/137 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD ++I+F      K  +Y + ++G +  +++  +E+    PVWSP G  IAF+     
Sbjct: 56  SPDGTEILFCY----KGDIYKVAASGGEAVQLTT-QESYEATPVWSPDGKQIAFSSDRYG 110

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS---------KLY 419
              + VM  +G   R L  +S  + P+ ++P G+ ++FS        S         +LY
Sbjct: 111 NMDVFVMPAEGGAARRLTVNSAAETPSAFTPDGKYVVFSASIQDPAASAMFPTSAMTELY 170

Query: 420 SIDLN-GRNETLINTPA 435
            + ++ G+ E ++ TPA
Sbjct: 171 KVPVSGGKTEQVLGTPA 187



 Score = 44.3 bits (103), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 5/101 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R S +G   L   + D    IY V        +LT       +  +SPD  QI F SDR 
Sbjct: 54  RISPDGTEILFCYKGD----IYKVAASGGEAVQLTTQESYEATPVWSPDGKQIAFSSDRY 109

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           G   ++VM + G   +R++ +  A      ++P G  + F+
Sbjct: 110 GNMDVFVMPAEGGAARRLTVNSAAET-PSAFTPDGKYVVFS 149



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 44/200 (22%), Positives = 91/200 (45%), Gaps = 31/200 (15%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +GK+   +V+ +    ++   ++   T+++T+T       S+  D+  +V+ S+R G 
Sbjct: 348 SPDGKQVAFTVRGE----VFVTSVEYGTTKQITHTPETEEGLSFGADNRTLVYASERGGN 403

Query: 326 EQLYVMQ------SNGSDQKRISQDK-------EASYFDPVWSPQGDLIAFTKFSGEKFA 372
             LY+ +      +N  +   I ++        E +Y  P +SP G  +AF +   ++  
Sbjct: 404 WGLYLAKIGRKEDANFPNATLIEEEALLPSKTVERTY--PQFSPDGKEVAFIE---DRNR 458

Query: 373 IGVMKKDGSQERLLVEDSNLQAP------TWSPSGR--SLIF-SRKKDGDTGSKLYSIDL 423
           + V+  +  + R + + S   +       +WSP G+  +L F   + D  +   L S D 
Sbjct: 459 LMVVNLETKKVRQITDGSTWYSTGGGFNYSWSPDGKWFTLEFIGNRHDPYSDVALVSADG 518

Query: 424 NGRNETLINTPAYASDPQWV 443
            G    L N+  +++ P+WV
Sbjct: 519 KGELVNLTNSGYFSASPRWV 538


>gi|298242339|ref|ZP_06966146.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297555393|gb|EFH89257.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 682

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 45/176 (25%)

Query: 310 SPDSSQIVF------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD  Q+ +      +     +  +++  + G + +R +Q+ E +   P WSP G  +AF
Sbjct: 22  SPDGKQVAYVVTRIDDKKHAYRSSIWISPTEGGEARRFTQETELTSA-PTWSPDGRWLAF 80

Query: 364 T------------------KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSL 404
                              K   +K  I VM  DG + R L   +    +P WSP G+ L
Sbjct: 81  VAKRESSDQPSTTEKKEQKKPGKDKPQIWVMPTDGGEARQLTFMEHGASSPAWSPDGKHL 140

Query: 405 IFSRK--------KDGDTGSKLYSID-----LNG------RNETLINTPAYASDPQ 441
           +FS +        +DG    K++ ID     L+G      R   L   P    +PQ
Sbjct: 141 LFSAQVGPADEETEDGKALPKVHVIDQLWYRLDGVGFIYERRAHLFLIPREGGEPQ 196



 Score = 40.0 bits (92), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 101/281 (35%), Gaps = 77/281 (27%)

Query: 187 GIIKNSLCVMDRDGANIRYLT------------PSRDQILFEPRFSPNQQKVAYATYDDE 234
           G  K  + VM  DG   R LT            P    +LF  +  P  ++    T D +
Sbjct: 102 GKDKPQIWVMPTDGGEARQLTFMEHGASSPAWSPDGKHLLFSAQVGPADEE----TEDGK 157

Query: 235 DILRVYLMDT---RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            + +V+++D    R+D           + L PR                         + 
Sbjct: 158 ALPKVHVIDQLWYRLDGVGFIYERRAHLFLIPR-------------------------EG 192

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKE------QLYV--MQSNG-SDQKRIS 342
              ++LT+  + +  A++SPD  QI F SDR  +        +YV  +Q N    + R+ 
Sbjct: 193 GEPQQLTDGDWNDGDAAWSPDGKQITFTSDRNEERWRIPGADIYVLALQDNKVVGEPRVL 252

Query: 343 QDKEASYFDPVWSPQGDLIAF--TKFSGEK-----FAIGVMKKDGSQERLLVE------- 388
            D       P WS  G  IAF  +K  G       + IG   + G  + L  E       
Sbjct: 253 TDGSMGCASPSWSADGQQIAFIASKKVGSAGHAYLYTIGASAEKGEPKNLTPEFEGTALD 312

Query: 389 -------DSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                  D +L   P WS  G++L       G   S++Y+I
Sbjct: 313 FTNSDLGDEHLMPQPAWSADGKTLYVLSSHRG--ASRIYAI 351


>gi|116626609|ref|YP_828765.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229771|gb|ABJ88480.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 879

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 76/192 (39%), Gaps = 46/192 (23%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-------------K 345
           N + +  S  Y+P S  +V+  DREG++Q+  +      Q RIS D              
Sbjct: 556 NGMLVYYSNRYAPKSWPVVW-IDREGRQQVIPLDPGRYSQPRISPDGTRLAMTVGREGGS 614

Query: 346 EASYFD-----------------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLV 387
           +   +D                 PVW+P G  + F   +    AI  M+ DG+ E R L 
Sbjct: 615 DIGIYDFQRQTMTRLTFAQNNSHPVWAPDGKHLVFLTETSRLLAIRWMRADGAGETRTLF 674

Query: 388 EDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL-------NGRNETLINT------ 433
           ED N   P ++SP G+       KD         +DL        G    +++T      
Sbjct: 675 EDKNELIPWSFSPDGQLAFTWLAKDASYHLWTLPLDLRDLDNPKTGPPAAVVHTRFTVSH 734

Query: 434 PAYASDPQWVGF 445
           PA++ D +W+ +
Sbjct: 735 PAFSPDGRWIAY 746


>gi|148655245|ref|YP_001275450.1| peptidase S41 [Roseiflexus sp. RS-1]
 gi|148567355|gb|ABQ89500.1| peptidase S41 [Roseiflexus sp. RS-1]
          Length = 1104

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 71/175 (40%), Gaps = 15/175 (8%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D++ V        RLT       S + SPD + + F    EG  +++VM + G + +R++
Sbjct: 24  DLWLVAASGGVARRLTANPGSVQSPALSPDGTLLAFVGRDEGPGEVFVMLAVGGEARRLT 83

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDGSQERLLVEDSNLQAPTWS 398
              E       WS  G  I F   +   F+    +  +  DG + RLL     +   ++ 
Sbjct: 84  FLGETMRVC-GWSRNGRDILFASSAHSPFSRSPLLYAVAADGGEPRLLPTGPAVHV-SYG 141

Query: 399 PSGRSLI---------FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           P G  +I         + R + G TG      D +G    LI+ P   + P WVG
Sbjct: 142 PDGGMVIGRNESDPARWKRYRGGRTGDVWIDPDGSGEWRRLISLPGNIAIPLWVG 196


>gi|116625466|ref|YP_827622.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228628|gb|ABJ87337.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 905

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 15/167 (8%)

Query: 250 PKRIGNFRSMILAPRFSSNGK-RALISVQKDEA-MDIYSVDLQSNATERLTNTLFINISA 307
           P+R+     + + P  S++GK  A  S +  E  +DI+   +      RLT         
Sbjct: 341 PERLTLDLGLNIDPAISADGKFVAYASDRSGEGNLDIWVKQIGGGEPIRLTRNPADEREP 400

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + + + S R+G     V    G +Q+ IS+ +      P +SP G  IA+ K  
Sbjct: 401 AFSPDGTSVAYRSVRDGGGIYVVSMLGGEEQRLISEGRR-----PRFSPDGKQIAYWKGL 455

Query: 368 GEKFAIG-------VMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIF 406
            E F +        +  +  SQ R +  E +    P WSP G+ ++F
Sbjct: 456 EEPFPVRAGSGTAYIFDRTTSQTRQIAPEFAAAVHPVWSPDGKHILF 502



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 80/206 (38%), Gaps = 31/206 (15%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           EP FSP+   VAY +  D     +Y++        + I   R     PRFS +GK+    
Sbjct: 399 EPAFSPDGTSVAYRSVRDGG--GIYVVSMLGGEEQRLISEGRR----PRFSPDGKQIAYW 452

Query: 276 VQKDEAMDI-------YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
              +E   +       Y  D  ++ T ++       +   +SPD   I+F   +E  + L
Sbjct: 453 KGLEEPFPVRAGSGTAYIFDRTTSQTRQIAPEFAAAVHPVWSPDGKHILFLGIKEDTKTL 512

Query: 329 --YVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + + + G    R   +   S  DP  W  +GD I +   +G   A     K G Q+  
Sbjct: 513 DWWFVPAAGGTAVRCHVNVSGSLVDPFEW--RGDFIYYETGAGTADA-----KIGKQQ-- 563

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKD 411
                 +   TW P G+ +  + + D
Sbjct: 564 ------IDPATWQPVGKPVRLTTRAD 583


>gi|260911011|ref|ZP_05917647.1| tricorn family protease MdsD [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260634815|gb|EEX52869.1| tricorn family protease MdsD [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 1077

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 33/62 (53%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIYSV        +LT     +    +SPDS Q+ F S+REG   +YVMQ  G   +RI+
Sbjct: 45  DIYSVPATGGTARQLTTNAAHDTHPVWSPDSKQLAFCSNREGSMDIYVMQREGGTPRRIT 104

Query: 343 QD 344
            +
Sbjct: 105 TN 106



 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 23/147 (15%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           N L++   A  SPD S + F      K  +Y + + G   ++++ +  A    PVWSP  
Sbjct: 22  NPLWMRHCA-ISPDGSTVAFTY----KGDIYSVPATGGTARQLTTNA-AHDTHPVWSPDS 75

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-------------TWSPSGRSLI 405
             +AF         I VM+++G   R +  +S  + P             +  P+ +S+I
Sbjct: 76  KQLAFCSNREGSMDIYVMQREGGTPRRITTNSGNETPIAFKDNNTVLYTTSIMPTAQSII 135

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLIN 432
           F+ +       ++Y +  NG    L +
Sbjct: 136 FANR----MLPQVYEVGTNGSRPHLFS 158


>gi|223038622|ref|ZP_03608915.1| protein TolB [Campylobacter rectus RM3267]
 gi|222880024|gb|EEF15112.1| protein TolB [Campylobacter rectus RM3267]
          Length = 424

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 54/250 (21%), Positives = 108/250 (43%), Gaps = 20/250 (8%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           SE V++        V+ R G NI           F      +Q+   Y+ Y    ++ +Y
Sbjct: 172 SEIVIADYTLTYQKVLVRGGLNI-----------FPKWIGADQRAFYYSDYSGAKLV-LY 219

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             D    +  K + +   M++A   S NG + L+++   +  DIY  DL S    ++TN 
Sbjct: 220 RYDVASGQKTKILDSRGGMLIASDVSQNGDKILLTMAPQDQPDIYIYDLNSKRLSQITNY 279

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDP-VW 354
             I+++ ++     ++VF SDR G   ++    +GS  +++     + +  ++Y +  V+
Sbjct: 280 SGIDVNGNFVDGDRRVVFVSDRLGYPNVFAQNVDGSGFEQMVYHGKNNNSVSTYQNYIVY 339

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           S + D    + F    F I ++       R L        P +S  G+S++F ++  G +
Sbjct: 340 SSRED--GKSGFGTRDFNIYMISTQTDYIRQLTASGKNLYPRFSSDGQSVVFIKELGGQS 397

Query: 415 GSKLYSIDLN 424
              +  ++ N
Sbjct: 398 SLGIIRVNEN 407


>gi|218265119|ref|ZP_03478701.1| hypothetical protein PRABACTJOHN_04411 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221574|gb|EEC94224.1| hypothetical protein PRABACTJOHN_04411 [Parabacteroides johnsonii
           DSM 18315]
          Length = 1079

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 25/162 (15%)

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RF ++NG   + S     A D+Y V        RLT+ +   +   +SPD   I F    
Sbjct: 29  RFPATNGNEIVFSY----AGDLYKVPATGGEAGRLTSHVGYEMFPRFSPDGKTIAFTGQY 84

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFTK-----F 366
           +G  ++Y M   G +  R+      S+D       P      W+P G  I +       F
Sbjct: 85  DGNTEVYTMPVTGGEPLRVTYTATNSRDDLGDRMGPNNIVMTWTPDGSRIVYRNRISDGF 144

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           SG+ F   V K+ G  E + + +      ++SP G+ L ++R
Sbjct: 145 SGKLFT--VEKEGGLSEVIPLPEGGFC--SYSPDGKQLAYNR 182



 Score = 40.4 bits (93), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 35/160 (21%), Positives = 77/160 (48%), Gaps = 15/160 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDRE 323
            S +G+R +++ + +    ++++ ++   T+ +T +   +   A +SPD   IV+ SD  
Sbjct: 322 LSPDGERLVVTARGE----VFNLPVEKGVTKNITRSPGAHDRDAQWSPDGKFIVYISDAT 377

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G+ +LY+  + G +  ++++D +        SP    + +T     K  + ++     Q 
Sbjct: 378 GETELYMQDATGGEPVQLTKDNDTYIRSFELSPDSKTLVYTD---RKNRVNLLDIATKQV 434

Query: 384 RLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             L++D     +  T+SP  + L ++R     TG+  YSI
Sbjct: 435 TTLLQDPMGEPRGVTFSPDSKWLTYTR-----TGNNEYSI 469


>gi|156741360|ref|YP_001431489.1| peptidase S9 prolyl oligopeptidase [Roseiflexus castenholzii DSM
           13941]
 gi|156232688|gb|ABU57471.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Roseiflexus castenholzii DSM 13941]
          Length = 708

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 8/99 (8%)

Query: 351 DPVWSPQGDLIAFTKFS------GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           +P  SP G  IAF + +        + AI +   DG   R L   +N  AP WSP GR L
Sbjct: 32  EPQVSPDGREIAFVRVTIDRSANANRRAIWIAPTDGGPPRRLTSGTNDSAPRWSPDGRWL 91

Query: 405 IFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQW 442
            F   + GD   +LY +  + G    L + P   SDP W
Sbjct: 92  AFVSVR-GDDRPQLYVLRRDGGEARRLTSLPQGVSDPAW 129



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 96/232 (41%), Gaps = 22/232 (9%)

Query: 214 LFEPRFSPNQQKVAYA--TYD-DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           L EP+ SP+ +++A+   T D   +  R  +     D  P R     +   APR+S +G+
Sbjct: 30  LEEPQVSPDGREIAFVRVTIDRSANANRRAIWIAPTDGGPPRRLTSGTNDSAPRWSPDGR 89

Query: 271 R-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
             A +SV+ D+   +Y +        RLT+        ++SPD  +I F S     E+  
Sbjct: 90  WLAFVSVRGDDRPQLYVLRRDGGEARRLTSLPQGVSDPAWSPDGRRIAFLSRLNAAERAS 149

Query: 330 VMQSNGSDQK----------RISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGV 375
              S    +              + +E   FDP    +    A  +F    S + + I V
Sbjct: 150 EDASEPEPEPADEFMHKQLVERRKHEEQRRFDPRVVRRLPYRAGVEFFDDRSTQMYIIEV 209

Query: 376 MKKD---GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              D     Q R + + D +  AP W P G+S++ +  +D +  S+ +  D+
Sbjct: 210 PDDDDAPAPQPRRITDADLDFGAPVWMPDGQSVLTTATRDPEADSQFFFFDV 261


>gi|312129903|ref|YP_003997243.1| wd40-like beta propeller containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311906449|gb|ADQ16890.1| WD40-like beta Propeller containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 1024

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/180 (19%), Positives = 79/180 (43%), Gaps = 12/180 (6%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNT--- 300
           R+  +P  +     + ++P  S +GK  A +S +   +M++Y  D ++    +  NT   
Sbjct: 276 RVKTSPHELLASGDINISPALSPDGKYLAYVSSKDVLSMNVYIADTKTKKVIKKINTDGF 335

Query: 301 -------LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                   FI  + ++SPD+ ++      + K +L ++ +   D++  +     ++  P 
Sbjct: 336 GQHVDSYSFIESTLTWSPDNKKVALVIQSKSKNKLLILDAFQGDKREYALPDLDAFTHPA 395

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           WSP  ++IA +     +  + +   + G  E +  +  +   P W+P G  + F   + G
Sbjct: 396 WSPHEEIIALSGMKNGQVDLYLYHLRSGKLEAVTSDRYSDVQPAWAPDGEHIYFVTDRGG 455



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 7/108 (6%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +S + +   +S  K+  +D+Y   L+S   E +T+  + ++  +++PD   I F +DR
Sbjct: 394 PAWSPHEEIIALSGMKNGQVDLYLYHLRSGKLEAVTSDRYSDVQPAWAPDGEHIYFVTDR 453

Query: 323 EG-----KEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLIAF 363
            G     KE+L + + N   +  + +    E   ++P  SP G ++ F
Sbjct: 454 GGSERLEKEKLKIAKINLKTKAIEILPLFSEVDLYNPQVSPDGKIVYF 501



 Score = 40.0 bits (92), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 43/215 (20%), Positives = 81/215 (37%), Gaps = 20/215 (9%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMD---------TRIDRAPKRIGNFRSMILAPRFSS 267
           P  SP+ + +AY +  D   + VY+ D            D   + + ++  +     +S 
Sbjct: 294 PALSPDGKYLAYVSSKDVLSMNVYIADTKTKKVIKKINTDGFGQHVDSYSFIESTLTWSP 353

Query: 268 NGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           + K+  + +Q      +  +D  Q +  E     L      ++SP    I     + G+ 
Sbjct: 354 DNKKVALVIQSKSKNKLLILDAFQGDKREYALPDLDAFTHPAWSPHEEIIALSGMKNGQV 413

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFSGEKFAIGV--MK 377
            LY+        + ++ D+ +    P W+P G+ I F        +   EK  I    +K
Sbjct: 414 DLYLYHLRSGKLEAVTSDRYSD-VQPAWAPDGEHIYFVTDRGGSERLEKEKLKIAKINLK 472

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
               +   L  + +L  P  SP G+ + F    DG
Sbjct: 473 TKAIEILPLFSEVDLYNPQVSPDGKIVYFLASPDG 507


>gi|88801496|ref|ZP_01117024.1| putative protease [Polaribacter irgensii 23-P]
 gi|88782154|gb|EAR13331.1| putative protease [Polaribacter irgensii 23-P]
          Length = 1079

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 23/147 (15%)

Query: 279 DEAMDIYSVDLQSNATERL----------TNTLFINIS-----ASYSPDSSQIVFESDRE 323
           ++A  ++++DL++N T+RL          T   + N++     AS SP+  ++V  S   
Sbjct: 267 EQAGYLHTLDLKTNNTKRLKINITGDFPWTAIKWENVNDRITYASISPNGKRVVMSS--- 323

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGVMKKDGSQ 382
            +  ++       D + I+   +A+    +WSP+GD IA F+   G+ +A+ +  +DG+ 
Sbjct: 324 -RGDIFTNPIEFGDSRNITHSSDAADRAAIWSPKGDKIAWFSDADGKGYALHLTNQDGTA 382

Query: 383 ERLLVE---DSNLQAPTWSPSGRSLIF 406
           +  ++          P WSP G+ + F
Sbjct: 383 KTEIISIGISKMAWEPNWSPDGKYISF 409



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 18/132 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYL---MDTRIDRAPKRIGNFRSMILAPRFSSN 268
           ++L EP    NQ   AYA     DI    L   + TR+     +  N       P+ S N
Sbjct: 26  RLLREPTIHGNQIAFAYAG----DIWTTNLASNLTTRLTSTSAKESN-------PQISPN 74

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--- 325
           GK    S  K   + +Y V +     +RLT     NI+  ++ D   ++F S+R      
Sbjct: 75  GKWITFSSNKSGILSVYIVAITGGEAKRLTWHTSENIARGWTNDGENVLFASNRNTAPSN 134

Query: 326 -EQLYVMQSNGS 336
             +LY + +NG 
Sbjct: 135 FNRLYTIPANGG 146



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 35/62 (56%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A DI++ +L SN T RLT+T     +   SP+   I F S++ G   +Y++   G + KR
Sbjct: 43  AGDIWTTNLASNLTTRLTSTSAKESNPQISPNGKWITFSSNKSGILSVYIVAITGGEAKR 102

Query: 341 IS 342
           ++
Sbjct: 103 LT 104


>gi|271967011|ref|YP_003341207.1| peptidase S9 prolyl oligopeptidase [Streptosporangium roseum DSM
           43021]
 gi|270510186|gb|ACZ88464.1| peptidase S9 prolyl oligopeptidase [Streptosporangium roseum DSM
           43021]
          Length = 642

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 34/168 (20%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   + F    +G+ Q++++  +G  + R+           VWSP G  IA+    G
Sbjct: 68  WSPDGHSLAFLRPVDGRAQIHLLPMDGG-EPRVLTAAPLGAGAAVWSPDGTGIAYGAPHG 126

Query: 369 EKF---------------AIGVMK-----------KDGSQERLLVEDSNLQAPTWSPSGR 402
           +                  +G+++             G   ++   D +   P+WSP GR
Sbjct: 127 DPDPHAPVVADRLEYKADGVGLLRGLTTHLSVVDVATGQTRQITSGDFHAGEPSWSPDGR 186

Query: 403 SLIFSRKKDGD-----TGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
            L F+   + D     TG+ +YS+D+  G  E L       +D  W+G
Sbjct: 187 KLAFAASMEPDRDLAVTGA-VYSVDVSGGEPELLTGAGVICTDAWWLG 233



 Score = 40.4 bits (93), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 7/100 (7%)

Query: 312 DSSQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           D + +V  +DRE  E   +++ + + G++ +R++     S   P WSP G  +AF +   
Sbjct: 26  DVAYVVATTDRESDENRSEIW-LAAPGAEPRRLTGGPRDSA--PRWSPDGHSLAFLRPVD 82

Query: 369 EKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFS 407
            +  I ++  DG + R+L        A  WSP G  + + 
Sbjct: 83  GRAQIHLLPMDGGEPRVLTAAPLGAGAAVWSPDGTGIAYG 122


>gi|150003761|ref|YP_001298505.1| putative peptidase/protease family protein [Bacteroides vulgatus
           ATCC 8482]
 gi|149932185|gb|ABR38883.1| putative peptidase/protease family protein [Bacteroides vulgatus
           ATCC 8482]
          Length = 1084

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 18/138 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + +NG    +++   +ASY   P+WSP    IAF     
Sbjct: 31  SPDGTEIAFCY----KGDIYKVPANGGTATQLTT--QASYECSPIWSPDSKQIAFASDRN 84

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSID----- 422
             F + VM  DG   R L   S  + P T++  G  ++FS        S L+        
Sbjct: 85  GNFDLFVMSADGGAARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTEL 144

Query: 423 -----LNGRNETLINTPA 435
                  GR E ++ TPA
Sbjct: 145 YKVPVTGGRTEQVLGTPA 162



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V        +LT       S  +SPDS QI F SDR G   L+VM ++G   +R++
Sbjct: 44  DIYKVPANGGTATQLTTQASYECSPIWSPDSKQIAFASDRNGNFDLFVMSADGGAARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++  G+ I F+
Sbjct: 104 T-HSASEIPSTFTTDGNYILFS 124


>gi|254881010|ref|ZP_05253720.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319640017|ref|ZP_07994744.1| peptidase/protease [Bacteroides sp. 3_1_40A]
 gi|254833803|gb|EET14112.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317388295|gb|EFV69147.1| peptidase/protease [Bacteroides sp. 3_1_40A]
          Length = 1084

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 59/138 (42%), Gaps = 18/138 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + +NG    +++   +ASY   P+WSP    IAF     
Sbjct: 31  SPDGTEIAFCY----KGDIYKVPANGGTATQLTT--QASYECSPIWSPDSKQIAFASDRN 84

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSID----- 422
             F + VM  DG   R L   S  + P T++  G  ++FS        S L+        
Sbjct: 85  GNFDLFVMSADGGAARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTEL 144

Query: 423 -----LNGRNETLINTPA 435
                  GR E ++ TPA
Sbjct: 145 YKVPVTGGRTEQVLGTPA 162



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V        +LT       S  +SPDS QI F SDR G   L+VM ++G   +R++
Sbjct: 44  DIYKVPANGGTATQLTTQASYECSPIWSPDSKQIAFASDRNGNFDLFVMSADGGAARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++  G+ I F+
Sbjct: 104 T-HSASEIPSTFTTDGNYILFS 124


>gi|320106816|ref|YP_004182406.1| hypothetical protein AciPR4_1592 [Terriglobus saanensis SP1PR4]
 gi|319925337|gb|ADV82412.1| hypothetical protein AciPR4_1592 [Terriglobus saanensis SP1PR4]
          Length = 650

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 4/106 (3%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +AS+SP+SS++         ++++++ S G   +++++       +PV+SP G  I FT 
Sbjct: 252 TASWSPNSSKLAVILQESAWDKIWLISSKGGKPQQLTKGTGEDE-NPVYSPDGKWIVFTS 310

Query: 366 ---FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
               + E+    +    G+  RL     N  AP WSP G  + FSR
Sbjct: 311 NRDLAEERHLWLIPSSGGAPRRLTHLSGNESAPQWSPDGTKIYFSR 356



 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 14/170 (8%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDE---DILRVYLMDTRIDRAPKRIGNFRS------- 258
           S D+    P +SP+  +++Y     +     L+V + D     A   I  + +       
Sbjct: 188 SSDRFDPNPSWSPDGTRISYTERSRQFFSGKLKVLVFDQATGTAGASIDLYTAKNDPGGA 247

Query: 259 -MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             +    +S N  +  + +Q+     I+ +  +    ++LT     + +  YSPD   IV
Sbjct: 248 WAVNTASWSPNSSKLAVILQESAWDKIWLISSKGGKPQQLTKGTGEDENPVYSPDGKWIV 307

Query: 318 FESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           F S+R+  E+  L+++ S+G   +R++     +   P WSP G  I F++
Sbjct: 308 FTSNRDLAEERHLWLIPSSGGAPRRLTH-LSGNESAPQWSPDGTKIYFSR 356


>gi|307331447|ref|ZP_07610564.1| amidohydrolase [Streptomyces violaceusniger Tu 4113]
 gi|306882890|gb|EFN13959.1| amidohydrolase [Streptomyces violaceusniger Tu 4113]
          Length = 1099

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 8/119 (6%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWS 355
           L+ T   N +A+ SP   +++ E     +  L+ +   G +   ++  D E +   PV+S
Sbjct: 54  LSFTAATNGAATLSPSGDRMIAEV----QNVLWSVARKGGEAVPLTPADLEPTR--PVYS 107

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGD 413
           P G L+A   + G  F I  ++ DGS  R   +   + + P WSP G  + F+ ++ GD
Sbjct: 108 PDGKLLAVCAYRGGGFHIWTLRPDGSGLRQRTDGPWDDRGPAWSPDGTRIAFASERGGD 166



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/118 (21%), Positives = 53/118 (44%), Gaps = 15/118 (12%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +S +GK   +   +     I+++    +   + T+  + +   ++SPD ++I F S+R
Sbjct: 104 PVYSPDGKLLAVCAYRGGGFHIWTLRPDGSGLRQRTDGPWDDRGPAWSPDGTRIAFASER 163

Query: 323 EGKE------QLYVMQSNGSDQKRIS---------QDKEASYFDPVWSPQGDLIAFTK 365
            G        +++V++    +  R++         QD     FDP WS  G+ + F +
Sbjct: 164 GGDPVAGSPYRIWVLEVATGELTRLTGADGQDGPLQDGAWEDFDPTWSADGERVLFVR 221


>gi|52841869|ref|YP_095668.1| acylaminoacyl peptidase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52628980|gb|AAU27721.1| acylaminoacyl peptidase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 659

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 127/314 (40%), Gaps = 67/314 (21%)

Query: 178 LFVSESVVSGIIKNSLC-VMDRDGANIRYLTPSRD----QILFEPRFSPNQQKVAYATYD 232
           + V + V  G+I   +C V+  DG   + L    D    Q + EP  SP+ + VAY    
Sbjct: 1   MIVMKGVCLGLI---ICLVVFHDGWAGKRLPELDDLYRIQDISEPDLSPDGKWVAYTVSQ 57

Query: 233 ---DEDILRVYLMDTRIDRAPKRIGNFR--SMILAPRFSSNGK--RALISVQKDEAMDIY 285
               ++I    +    +D    +   F   S    P++S NGK    L    K+    I+
Sbjct: 58  LNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPKWSPNGKWLAYLSDGGKEGTTQIW 117

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----------------------- 322
              +Q N   +LT+        ++SPDS++I F + +                       
Sbjct: 118 IASVQDNKEHQLTHIDGEVSDFTWSPDSNRIAFIAQKSVPSNEEEQPIVVDRYQFKVDGV 177

Query: 323 ----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFA 372
               +G++ LY+++       +++      Y  P WSP G  IAF    G+       + 
Sbjct: 178 GYLGKGRDHLYLVELKSKAITQLTDGNHDEYL-PAWSPDGKYIAFVTKRGKDPDRHFNYD 236

Query: 373 IGVMK-KDGSQERLLVE----------DSNLQAPTWSPSGRSLIFSRKKDGD----TGSK 417
           I +++ K G++ER L            DSNL   +WSP    + + R  +      + ++
Sbjct: 237 IYLIEPKSGAKERQLTHFSGSDMNPDYDSNL---SWSPDSSKIAYLRSNEHQWTYYSPNQ 293

Query: 418 LYSIDLNGRNETLI 431
           L  ID+N ++E +I
Sbjct: 294 LAIIDINTKDEKII 307


>gi|75908402|ref|YP_322698.1| peptidase C14 [Anabaena variabilis ATCC 29413]
 gi|75702127|gb|ABA21803.1| Peptidase C14, caspase catalytic subunit p20 [Anabaena variabilis
            ATCC 29413]
          Length = 1557

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 112/270 (41%), Gaps = 37/270 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS----------SPASWRKIAHTISDD-- 161
            GR++    D      RLWDV    Q IG+ F            SP   R ++ +  +   
Sbjct: 1079 GRIVSGSNDNT---IRLWDVN--GQPIGQPFRGHEGGVNSVAFSPDGGRIVSGSYDNTVR 1133

Query: 162  --------IYQSITGEKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRD 211
                    I Q   G +G  NS + F  +   +VSG   N++ + D +G  I       +
Sbjct: 1134 LWDVNGQPIGQPFRGHEGGVNS-VAFSPDGGRIVSGSNDNTIRLWDMNGQPIGQPFRGHE 1192

Query: 212  QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +++   FSP+  ++   +YD    +R++ M+ +    P R      M+L+  FS +G R
Sbjct: 1193 DMVYSVAFSPDGGRIVSGSYD--KTIRLWDMNGQPIGQPFR--GHEDMVLSVAFSPDGGR 1248

Query: 272  ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             ++S   D  + ++  + QS       +   +N S ++SPD  +IV  S+      + + 
Sbjct: 1249 -IVSGSYDNTVRLWEANGQSIGQPFRGHENLVN-SVAFSPDGGRIVSGSN---DNTIRLW 1303

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              NG    +  +  E   +   +SP G  I
Sbjct: 1304 DVNGQPIGQPFRGHEGRVYSVAFSPDGGRI 1333


>gi|302882872|ref|XP_003040341.1| hypothetical protein NECHADRAFT_34811 [Nectria haematococca mpVI
           77-13-4]
 gi|256721219|gb|EEU34628.1| hypothetical protein NECHADRAFT_34811 [Nectria haematococca mpVI
           77-13-4]
          Length = 629

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 94/222 (42%), Gaps = 35/222 (15%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFSPNQQKVAYATY---- 231
           I +++    SG +   L V + DG++ + L  +      F   +SP  + + +++     
Sbjct: 12  IFYLNRIAPSGSL---LYVANADGSDAKPLMNNGSAAFDFHASWSPGGKWIVFSSERRAD 68

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              DI RV    + ++   +      + +L+P  ++    A +S Q +   +I+  DL++
Sbjct: 69  GQSDIYRVKPNGSELETLVQTDSFEDAGVLSPDGTT---LAYVSTQGNYTANIWVKDLRT 125

Query: 292 NATERLTNTLFI---------NISASYSPDSSQIVFESDRE----------GKEQ----- 327
              + LTNT            +   ++SPD   I F SDR           G E      
Sbjct: 126 GIAKNLTNTASTRGDRSSPQGHFRPAWSPDGEWIAFSSDRNTEWTGHSDGTGWEHTQTLS 185

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +Y+++ NGSD + ++     +   P WSP G  I ++  S E
Sbjct: 186 IYIIRPNGSDFRAVASKPGYALGSPQWSPDGSRILYSSISTE 227



 Score = 44.3 bits (103), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 28/178 (15%)

Query: 265 FSSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           +S  GK  + S ++  D   DIY V    +  E L  T     +   SPD + + + S +
Sbjct: 52  WSPGGKWIVFSSERRADGQSDIYRVKPNGSELETLVQTDSFEDAGVLSPDGTTLAYVSTQ 111

Query: 323 EG-------KEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAF-----TKFSG 368
                    K+    +  N ++      D+ +   +F P WSP G+ IAF     T+++G
Sbjct: 112 GNYTANIWVKDLRTGIAKNLTNTASTRGDRSSPQGHFRPAWSPDGEWIAFSSDRNTEWTG 171

Query: 369 ----------EKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDT 414
                     +  +I +++ +GS  R +       L +P WSP G  +++S     DT
Sbjct: 172 HSDGTGWEHTQTLSIYIIRPNGSDFRAVASKPGYALGSPQWSPDGSRILYSSISTEDT 229



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 89/209 (42%), Gaps = 35/209 (16%)

Query: 267 SNGKRALISVQK--DEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVFESDR 322
           S+GKR +  + +       +Y  +   +  + L N  +   +  AS+SP    IVF S+R
Sbjct: 6   SDGKRGIFYLNRIAPSGSLLYVANADGSDAKPLMNNGSAAFDFHASWSPGGKWIVFSSER 65

Query: 323 --EGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFA------- 372
             +G+  +Y ++ NGS+ + + Q    S+ D  V SP G  +A+    G   A       
Sbjct: 66  RADGQSDIYRVKPNGSELETLVQTD--SFEDAGVLSPDGTTLAYVSTQGNYTANIWVKDL 123

Query: 373 -IGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGD-TGS----------- 416
             G+ K   +      + S+ Q    P WSP G  + FS  ++ + TG            
Sbjct: 124 RTGIAKNLTNTASTRGDRSSPQGHFRPAWSPDGEWIAFSSDRNTEWTGHSDGTGWEHTQT 183

Query: 417 -KLYSIDLNGRN-ETLINTPAYA-SDPQW 442
             +Y I  NG +   + + P YA   PQW
Sbjct: 184 LSIYIIRPNGSDFRAVASKPGYALGSPQW 212


>gi|301310105|ref|ZP_07216044.1| MdsD protein [Bacteroides sp. 20_3]
 gi|300831679|gb|EFK62310.1| MdsD protein [Bacteroides sp. 20_3]
          Length = 1080

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 18/138 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + + G    +++   +ASY   P+WSP G  IAF     
Sbjct: 30  SPDGTEIAFCY----KGDIYKVPAKGGTATQLT--TQASYECTPIWSPDGKQIAFASDRN 83

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS---------KL 418
             F + VM  +G   + L   S  + P+ ++P G+ ++FS        S         +L
Sbjct: 84  GNFDLFVMPSNGGTAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTEL 143

Query: 419 YSIDL-NGRNETLINTPA 435
           Y + +  GR E ++ TPA
Sbjct: 144 YKVPIGGGRTEQVLGTPA 161



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  +     +LT       +  +SPD  QI F SDR G   L+VM SNG   + ++
Sbjct: 43  DIYKVPAKGGTATQLTTQASYECTPIWSPDGKQIAFASDRNGNFDLFVMPSNGGTAQCLT 102

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++P G  + F+
Sbjct: 103 T-HSASEIPSAFTPDGKYVLFS 123



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 44/201 (21%), Positives = 87/201 (43%), Gaps = 34/201 (16%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +GK+  ++++ +    ++      N T+++TNT        +SPD+  + + S+R G 
Sbjct: 322 SPDGKQIALTLRGE----VFVTSADYNTTKQITNTPAAETGVCFSPDNRTLAYASERGGN 377

Query: 326 EQLYVMQSNGSDQKRI-------------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            QLY+ +    ++                S+  E +Y  P +SP G  +AF +   ++  
Sbjct: 378 WQLYLAKIARKEEANFPNATIIEEEVLLPSKTVERNY--PQFSPDGKELAFIE---DRMR 432

Query: 373 IGVMKKDGSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDL--- 423
           + V+  +  + R + + S   +       +WSP G+   F+ +  G+       I L   
Sbjct: 433 LMVVNLETKKVRQVTDGSTWYSTAGGFDYSWSPDGK--WFTLRFIGNKHDPYSDIGLVSA 490

Query: 424 -NGRNETLINTPAYASDPQWV 443
             G    L N+   ++ PQWV
Sbjct: 491 QGGEITNLTNSGYTSTSPQWV 511


>gi|194367095|ref|YP_002029705.1| transcriptional regulator domain-containing protein
           [Stenotrophomonas maltophilia R551-3]
 gi|194349899|gb|ACF53022.1| transcriptional regulator domain protein [Stenotrophomonas
           maltophilia R551-3]
          Length = 774

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 10/154 (6%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           APR+S +GK  L+ V+  +  D++ +     A E+LTN        ++  D   IVF   
Sbjct: 368 APRYSPDGK-WLVFVRNPQMGDLWRMPAGGGALEQLTNESAEQRGWAWLGDGRSIVFGRR 426

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVW---SPQGDLIAFTKFSGEKFAIGVMKK 378
            + + +LY +      ++R  +D  A   D  W   S  GD++AF     +     +   
Sbjct: 427 VDSEVRLYYLDV----ERRTLRD--AGLDDAQWPTVSRHGDVLAFVHRRAQFGVFRMPMA 480

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            G  ERL         P  +P GR L+F+  + G
Sbjct: 481 GGGAERLFASSGRDGQPMAAPDGRQLVFTSDRSG 514



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 7/118 (5%)

Query: 297 LTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRIS-QDKEASYFDP 352
           +T T       + SPD SQ+ +E    D  G   + V  S  +  ++++   K AS   P
Sbjct: 215 ITATSGFETYPTLSPDGSQVAYEGANEDGAGGGAIKVQTSGNAPARQLALPPKGASDRFP 274

Query: 353 VWSPQGDLIAFTKFS---GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            WSP G  IAF +FS   G +  I        ++    + + L +  W+P GR L+F 
Sbjct: 275 SWSPDGREIAFARFSADGGCQVLIASATGGVVRQATRCDGTELLSFDWTPDGRGLVFG 332



 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 10/142 (7%)

Query: 305 ISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDL 360
           +S  ++PD   +VF S   R     + V+       + ++ + +   FD  P +SP G  
Sbjct: 318 LSFDWTPDGRGLVFGSMVGRYAHRGIRVLDLASGQWRALAYEVDQDDFDYAPRYSPDGKW 377

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + F +         +    G+ E+L  E +  +   W   GRS++F R+ D +   +LY 
Sbjct: 378 LVFVRNPQMGDLWRMPAGGGALEQLTNESAEQRGWAWLGDGRSIVFGRRVDSEV--RLYY 435

Query: 421 IDLNGRNETLINTPAYASDPQW 442
           +D+  R  TL +  A   D QW
Sbjct: 436 LDVERR--TLRD--AGLDDAQW 453


>gi|262381631|ref|ZP_06074769.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262296808|gb|EEY84738.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 1080

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 18/138 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + + G    +++   +ASY   P+WSP G  IAF     
Sbjct: 30  SPDGTEIAFCY----KGDIYKVPAKGGTATQLT--TQASYECTPIWSPDGKQIAFASDRN 83

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS---------KL 418
             F + VM  +G   + L   S  + P+ ++P G+ ++FS        S         +L
Sbjct: 84  GNFDLFVMPSNGGTAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTEL 143

Query: 419 YSIDL-NGRNETLINTPA 435
           Y + +  GR E ++ TPA
Sbjct: 144 YKVPIGGGRTEQVLGTPA 161



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  +     +LT       +  +SPD  QI F SDR G   L+VM SNG   + ++
Sbjct: 43  DIYKVPAKGGTATQLTTQASYECTPIWSPDGKQIAFASDRNGNFDLFVMPSNGGTAQCLT 102

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++P G  + F+
Sbjct: 103 T-HSASEIPSAFTPDGKYVLFS 123



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 32/200 (16%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +GK+  ++++ +    ++      N T+++TNT        +SPD+  + + S+R G 
Sbjct: 322 SPDGKQIALTLRGE----VFVTSADYNTTKQITNTPAAETGVCFSPDNRTLAYASERGGN 377

Query: 326 EQLYVMQSNGSDQKRI-------------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            QLY+ +    ++                S+  E +Y  P +SP G  +AF +   ++  
Sbjct: 378 WQLYLAKIARKEEANFPNATIIEEEVLLPSKTVERNY--PQFSPDGKELAFIE---DRMR 432

Query: 373 IGVMKKDGSQERLLVEDSNLQAP------TWSPSGR--SLIFSRKKDGDTGSKLYSIDLN 424
           + V+  +  + R + + S   +       +WSP G+  +L F   K  D  S +  +   
Sbjct: 433 LMVVNLETKKVRQVTDGSTWYSTAGGFDYSWSPDGKWFTLRFIGNKH-DPYSDIGLVSAQ 491

Query: 425 GRNETLINTPAYAS-DPQWV 443
           G   T +    Y S  PQWV
Sbjct: 492 GGEITNLTNSGYTSISPQWV 511


>gi|225011742|ref|ZP_03702180.1| WD40 domain protein beta Propeller [Flavobacteria bacterium
           MS024-2A]
 gi|225004245|gb|EEG42217.1| WD40 domain protein beta Propeller [Flavobacteria bacterium
           MS024-2A]
          Length = 304

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 74/157 (47%), Gaps = 15/157 (9%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +GK  +   +++   D+Y +++      RLT+T  ++    YSPD   I F S R  +
Sbjct: 143 SPDGKDIVYCAERNGNYDVYKMNVDGGEEIRLTSTEGLDDGPEYSPDGMYIYFNSFRTKQ 202

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSP---QGDLIAFTKFSGEKFAIG--VMKKDG 380
            Q++ M+ +G+  ++++ D  +++F  + +P   Q  LI++ +   +K   G  V  +  
Sbjct: 203 MQIWRMKPDGTQAEQMTFDNYSNWFAHI-APNNSQAVLISYIENQEDKHPFGRAVKLRLI 261

Query: 381 SQERLLVED---------SNLQAPTWSPSGRSLIFSR 408
             E   ++D           +  P+WSP G    + R
Sbjct: 262 DLETKKIKDLTDVFYGGQGTINVPSWSPDGLEFAYVR 298


>gi|254881047|ref|ZP_05253757.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319640054|ref|ZP_07994781.1| exported protease [Bacteroides sp. 3_1_40A]
 gi|254833840|gb|EET14149.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317388332|gb|EFV69184.1| exported protease [Bacteroides sp. 3_1_40A]
          Length = 1074

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 20/144 (13%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D+Y   L     ++LT+ +   + A +SPD   I F    +G  ++Y++ ++G + +R
Sbjct: 41  AGDLYKAPLNGGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGNTEVYLIPTDGGEPQR 100

Query: 341 I------SQDKEASYFDP-----VWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQER 384
           +      S+D       P      W+P G  I +       F G+ ++I   K  G  E 
Sbjct: 101 LTYTATNSRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGKLWSIS--KNGGMSEV 158

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSR 408
           + + +      ++SP G+ L ++R
Sbjct: 159 IPLPEGGFC--SYSPDGKKLAYNR 180



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 5/106 (4%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF 318
           + A   S +G R  ++ + +    ++ V  +   T  +T T   N     +SP+  QI +
Sbjct: 315 LTAASLSPDGHRLAVTARGE----VFDVPAEKGVTRDITRTPGANEREGEWSPNGKQIAY 370

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            SDR G+ ++++    G D  +++Q+ +      +WSP    I +T
Sbjct: 371 ISDRTGETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKKILYT 416


>gi|268317952|ref|YP_003291671.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Rhodothermus marinus DSM 4252]
 gi|262335486|gb|ACY49283.1| peptidase S9B dipeptidylpeptidase IV domain protein [Rhodothermus
           marinus DSM 4252]
          Length = 1078

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 14/156 (8%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPV---- 353
           N  + N S + SP   +I F + R G   +Y+  +N G   +R+   + +  F+ +    
Sbjct: 292 NAGYYNTSPALSPQGDRIAFITTRNGLFDVYLASANDGKILRRLVAGQTSPDFESLRILT 351

Query: 354 ----WSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVED-SNLQAPTWSPSGRSLIFS 407
               WSP G  +A    SG   AI V+  + G+  R  + D   + +  WSP GR + F+
Sbjct: 352 PGLTWSPDGRFLALAVKSGPTDAIAVINVETGAHVRYRIPDVEQILSLAWSPDGRRIAFA 411

Query: 408 RKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQW 442
             +     S +Y +DL  G      N      +P W
Sbjct: 412 GTQRAQ--SDIYVLDLRTGETINYTNDAFSDHEPAW 445



 Score = 40.4 bits (93), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 34/63 (53%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           IL+  +S +G+R   +  +    DIY +DL++  T   TN  F +   ++ PD   +VF 
Sbjct: 396 ILSLAWSPDGRRIAFAGTQRAQSDIYVLDLRTGETINYTNDAFSDHEPAWRPDGRALVFH 455

Query: 320 SDR 322
           SDR
Sbjct: 456 SDR 458


>gi|317486270|ref|ZP_07945102.1| tol-Pal system beta propeller repeat protein TolB [Bilophila
           wadsworthia 3_1_6]
 gi|316922440|gb|EFV43694.1| tol-Pal system beta propeller repeat protein TolB [Bilophila
           wadsworthia 3_1_6]
          Length = 440

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 72/358 (20%), Positives = 140/358 (39%), Gaps = 69/358 (19%)

Query: 100 FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS-SPASWRKIAHTI 158
           F+ +   GA +LVT    +  K    VE R+++    + + G  +   +    + +A   
Sbjct: 100 FKRFQLAGADLLVTAGWPQGDKSGSTVELRVYETFSGQFVFGNAYSGVTKEEVQDVADRF 159

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
             D+ +++TG    F + + FV  S   G  K  + +    G N+R +T     I   P 
Sbjct: 160 CADLMKALTGHGDFFLATLAFVKNS---GKNKRDVWITKPTGRNLRKIT-DIPGIAMSPS 215

Query: 219 FSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRALI 274
           +S + + + ++  DD+   L V+      DR   R+   R   + ++ P F+  G +  +
Sbjct: 216 WSLDGRFIVFSHMDDKSHALGVW------DRLTNRVQRIRFPGNTVIGPTFTP-GNKVAV 268

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S+   +  DI+ ++        L     IN+S ++    +++ F S+R G  Q+++    
Sbjct: 269 SLSTGKNPDIFMLNHAFQKERTLEANGTINVSPTFDAAGTKMAFTSNRMGGPQIFMK--- 325

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                                   DL +                 GS  R+  + +    
Sbjct: 326 ------------------------DLAS-----------------GSVSRVTKQGNYNTE 344

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           P+ SP G  + FSR      G++++  DL    E  I+        P++A D  ++ F
Sbjct: 345 PSMSPDGTLIAFSRLT--SEGNRIFVQDLTTGTEQQISFGPGNDVLPSFAPDSYFIAF 400



 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 7/145 (4%)

Query: 213 ILFEPRFSPNQQKVAYAT--YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           I   P F     K+A+ +       I    L    + R  K+ GN+ +    P  S +G 
Sbjct: 297 INVSPTFDAAGTKMAFTSNRMGGPQIFMKDLASGSVSRVTKQ-GNYNT---EPSMSPDGT 352

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
               S    E   I+  DL +   ++++     ++  S++PDS  I F S+R G  Q+Y+
Sbjct: 353 LIAFSRLTSEGNRIFVQDLTTGTEQQISFGPGNDVLPSFAPDSYFIAFTSNRSGPNQIYL 412

Query: 331 MQSNGSDQKRISQDKEASYFDPVWS 355
              +G D K++      + F P W 
Sbjct: 413 TTRHGGDAKKVPTGSGDASF-PRWG 436


>gi|298376771|ref|ZP_06986726.1| MdsD protein [Bacteroides sp. 3_1_19]
 gi|298266649|gb|EFI08307.1| MdsD protein [Bacteroides sp. 3_1_19]
          Length = 1080

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 18/138 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + + G    +++   +ASY   P+WSP G  IAF     
Sbjct: 30  SPDGTEIAFCY----KGDIYKVPAKGGTATQLT--TQASYECTPIWSPDGKQIAFASDRN 83

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS---------KL 418
             F + VM  +G   + L   S  + P+ ++P G+ ++FS        S         +L
Sbjct: 84  GNFDLFVMPSNGGTAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTEL 143

Query: 419 YSIDL-NGRNETLINTPA 435
           Y + +  GR E ++ TPA
Sbjct: 144 YKVPIGGGRTEQVLGTPA 161



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  +     +LT       +  +SPD  QI F SDR G   L+VM SNG   + ++
Sbjct: 43  DIYKVPAKGGTATQLTTQASYECTPIWSPDGKQIAFASDRNGNFDLFVMPSNGGTAQCLT 102

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++P G  + F+
Sbjct: 103 T-HSASEIPSAFTPDGKYVLFS 123



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 86/201 (42%), Gaps = 34/201 (16%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +GK+  ++++ +    ++      N T+++TNT        +SPD+  + + S+R G 
Sbjct: 322 SPDGKQIALTLRGE----VFVTSADYNTTKQITNTPAAETGVCFSPDNRTLAYASERGGN 377

Query: 326 EQLYVMQSNGSDQKRI-------------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            QLY+ +    ++                S+  E +Y  P +SP    +AF +   ++  
Sbjct: 378 WQLYLAKIARKEEANFPNATIIEEEVLLPSKTVERNY--PQFSPDAKELAFIE---DRMR 432

Query: 373 IGVMKKDGSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDL--- 423
           + V+  +  + R + + S   +       +WSP G+   F+ +  G+       I L   
Sbjct: 433 LMVVNLETKKVRQVTDGSTWYSTAGGFDYSWSPDGK--WFTLRFIGNKHDPYSDIGLVSA 490

Query: 424 -NGRNETLINTPAYASDPQWV 443
             G    L N+   ++ PQWV
Sbjct: 491 QGGEITNLTNSGYTSTSPQWV 511


>gi|294777459|ref|ZP_06742910.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           vulgatus PC510]
 gi|294448527|gb|EFG17076.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           vulgatus PC510]
          Length = 1074

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 20/144 (13%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D+Y   L     ++LT+ +   + A +SPD   I F    +G  ++Y++ ++G + +R
Sbjct: 41  AGDLYKAPLNGGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGNTEVYLIPTDGGEPQR 100

Query: 341 I------SQDKEASYFDP-----VWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQER 384
           +      S+D       P      W+P G  I +       F G+ ++I   K  G  E 
Sbjct: 101 LTYTATNSRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGKLWSIS--KNGGMSEV 158

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSR 408
           + + +      ++SP G+ L ++R
Sbjct: 159 IPLPEGGFC--SYSPDGKKLAYNR 180



 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 5/106 (4%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF 318
           + A   S +G R  ++ + +    ++ V  +   T  +T T   N     +SP+  QI +
Sbjct: 315 LTAASLSPDGHRLAVTARGE----VFDVPAEKGVTRDITRTPGANEREGEWSPNGKQIAY 370

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            SDR G+ ++++    G D  +++Q+ +      +WSP    I +T
Sbjct: 371 ISDRTGETEIWLQSIEGGDPIQLTQNNDTYIRQLMWSPDSKKILYT 416


>gi|325299351|ref|YP_004259268.1| peptidase S41 [Bacteroides salanitronis DSM 18170]
 gi|324318904|gb|ADY36795.1| peptidase S41 [Bacteroides salanitronis DSM 18170]
          Length = 1080

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTK 365
           A  SPD ++I F      K  +Y ++++G +  R++   + SY   PVWSP G  IAF  
Sbjct: 28  AVISPDGNEIAFCY----KGDIYKVKASGGEAVRLTT--QPSYESTPVWSPDGKQIAFAS 81

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS-------- 416
                  + +M   G + R L  +S  + P+ ++P G+ ++FS       GS        
Sbjct: 82  DRFGNMDVFIMPSQGGEARRLTFNSASEIPSAFTPDGKQVVFSASIQDPAGSALFPKSAM 141

Query: 417 -KLYSIDL-NGRNETLINTPA 435
            +LY +    GR   +I TPA
Sbjct: 142 TELYQVPAEGGRTAQIIGTPA 162



 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V        RLT       +  +SPD  QI F SDR G   +++M S G + +R++
Sbjct: 44  DIYKVKASGGEAVRLTTQPSYESTPVWSPDGKQIAFASDRFGNMDVFIMPSQGGEARRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
            +  AS     ++P G  + F+
Sbjct: 104 FNS-ASEIPSAFTPDGKQVVFS 124



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 46/220 (20%), Positives = 91/220 (41%), Gaps = 34/220 (15%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALI 274
           E   SP+ ++VA+       ++R  +  T ++    K+I +         F ++ +  + 
Sbjct: 320 EATVSPDGKQVAF-------VVRGEVFVTSVEYGTTKQITHTPEAEEGVSFGADNRTLVY 372

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISA------------SYSPDSSQIVFESDR 322
           + ++D    +Y+  +     +   N   I   A             +SPD  +I F    
Sbjct: 373 ASERDGISGLYTAKISREEEKNFPNATLIEEEALLPSKTVERSYPKFSPDGKEIAF---I 429

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASY-----FDPVWSPQGDLIA--FTKFSGEKFA-IG 374
           EG+ +L V+       ++++ D    Y     FD  WSP G   A  F     E ++ IG
Sbjct: 430 EGRTRLMVLNLKSKKVRQVT-DGSTWYSLSGGFDYQWSPDGKWFALEFIAHKHEPYSDIG 488

Query: 375 VMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDG 412
           ++  DG    + + +S   +  P W+  G +L+F+ ++ G
Sbjct: 489 LVCADGKSPIINLTNSGYTSGMPRWTMDGNALLFTTERYG 528


>gi|297161910|gb|ADI11622.1| hypothetical protein SBI_08504 [Streptomyces bingchenggensis BCW-1]
          Length = 1078

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 68/168 (40%), Gaps = 32/168 (19%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +G R +  VQ      ++S+  +  A   LT          +SPD   +   + R G
Sbjct: 76  LSPSGDRLVAEVQNV----LWSLPRKGGAATALTPPDLEPTRPVFSPDGKLLAICAYRGG 131

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTK------FSGEKFAI--- 373
              L+ ++ +GSD   + Q  +  + D  P WSP G  IAF         +G  + +   
Sbjct: 132 GFHLWTLRPDGSD---VRQRTDGPWDDRGPAWSPDGTRIAFASERGGDTVAGSPYRVWVL 188

Query: 374 -----------GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
                      GV  +DG  +  + ED +   P WSP G  ++F R +
Sbjct: 189 EVATGELTRLTGVPGQDGPLQDGVWEDFD---PAWSPDGERVLFVRGR 233



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 8/117 (6%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQG 358
           T   N +A+ SP   ++V E     +  L+ +   G     ++  D E +   PV+SP G
Sbjct: 67  TGATNGAATLSPSGDRLVAEV----QNVLWSLPRKGGAATALTPPDLEPTR--PVFSPDG 120

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDT 414
            L+A   + G  F +  ++ DGS  R   +   + + P WSP G  + F+ ++ GDT
Sbjct: 121 KLLAICAYRGGGFHLWTLRPDGSDVRQRTDGPWDDRGPAWSPDGTRIAFASERGGDT 177



 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 28/186 (15%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS +GK   I   +     ++++    +   + T+  + +   ++SPD ++I F S+R
Sbjct: 114 PVFSPDGKLLAICAYRGGGFHLWTLRPDGSDVRQRTDGPWDDRGPAWSPDGTRIAFASER 173

Query: 323 EGKE------QLYVMQSNGSDQKRIS---------QDKEASYFDPVWSPQGDLIAFT--K 365
            G        +++V++    +  R++         QD     FDP WSP G+ + F   +
Sbjct: 174 GGDTVAGSPYRVWVLEVATGELTRLTGVPGQDGPLQDGVWEDFDPAWSPDGERVLFVRGR 233

Query: 366 FSGEKF---AIGVMKKDGSQERLLVEDS------NLQAPTWSPSGRSLIFSRKKDGDTGS 416
            +G       +  ++ DGS   + VE +       + AP+ SP G +L + R       S
Sbjct: 234 LTGAALDARTVASVRADGSGP-VAVEHTEAAAGVQVLAPSVSPGG-TLAYLRTTPAPDAS 291

Query: 417 KLYSID 422
               +D
Sbjct: 292 CTLVVD 297



 Score = 43.9 bits (102), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 79/204 (38%), Gaps = 24/204 (11%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKRALI 274
           P  SP+ +KVA+A  +      +++  T   R P+RI   +    +L P ++ +G+  + 
Sbjct: 377 PALSPDGRKVAFAALNS-----LWVAGTTGGRGPRRIVRASPTRYLLGPTWTPDGRALIY 431

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +  +D  + ++  DL S     L +   ++ + S + D    +   D  G   L  + + 
Sbjct: 432 ADDRDGLLAVHRRDLASGEETTLASGGRVHPALSPAGDRLACI---DMSGNLVLRDLAAG 488

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFSGEKFAIGVMKKDGSQERL-- 385
                            P WSP G  IA+        +F      I ++       RL  
Sbjct: 489 TERTLAAPLGGGGLPGRPSWSPDGRFIAYCDRNRLNQRFREGYNLIRIVDAGSGAARLYA 548

Query: 386 LVEDSNLQ-----APTWSPSGRSL 404
           L   ++L       P WSP GR L
Sbjct: 549 LAPHTSLSDRYDSGPVWSPDGRHL 572


>gi|269837974|ref|YP_003320202.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269787237|gb|ACZ39380.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 652

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 3/85 (3%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRI 341
           I+ V        RLT +   + +  +SPD  ++ F SDR   GK Q+YV+   G +  R+
Sbjct: 48  IWLVAADGGTPRRLTTSEAADGAPRWSPDGRRLAFVSDRLERGKPQVYVLDLAGGEAVRV 107

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKF 366
           +   E       WSP G L+A+T  
Sbjct: 108 TA-AEGGVGQAAWSPDGSLLAYTAM 131


>gi|303328322|ref|ZP_07358760.1| putative TolB protein [Desulfovibrio sp. 3_1_syn3]
 gi|302861652|gb|EFL84588.1| putative TolB protein [Desulfovibrio sp. 3_1_syn3]
          Length = 442

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 62/327 (18%), Positives = 147/327 (44%), Gaps = 27/327 (8%)

Query: 126 VEFRLWDVKDRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           V+ R ++     ++ GK++   +     ++A     D+ +++TG    F S + FV ++ 
Sbjct: 126 VQIRAFETNTGGRLFGKEYPKVNKRDLPEVADRFCADLLEALTGNGAFFRSTLAFVKKT- 184

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMD 243
             G +  ++ ++   G ++R +T    + L  P +SP+ + V ++  D +   L V+   
Sbjct: 185 --GKMSANVWLVKPTGRDLRQITNIPGEAL-SPAWSPDGRFVVFSHIDPKSHALGVW--- 238

Query: 244 TRIDRAPKRIGNFR---SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              DR+  ++   R   ++++ P F  + K A +++   +   I+ ++        L  +
Sbjct: 239 ---DRSTGKVQRIRFPGNVVIGPAFMPDNKVA-VALSNGKYPVIFLLNHVFQKERVLEQS 294

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGD 359
             IN+S ++    +++ F S R G  Q+++         R+S  K  +Y  +   SP G 
Sbjct: 295 NAINVSPTFDSTGTKMAFTSSRLGGPQIFLKDLGSGSITRVS--KNGTYNTEANLSPDGT 352

Query: 360 LIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           L+ +++ +   F   +  +D   G + ++     + + P++      + F+  ++G  G 
Sbjct: 353 LVVYSRMT--DFGHRIFVQDMLTGMERQITFGPGSDEQPSFCADSYFIAFASTRNG--GR 408

Query: 417 KLYSIDLNGRNETLINTPAYASD-PQW 442
            +Y    +G +   + T   A+  P+W
Sbjct: 409 GIYLTTRHGGDAKQVPTGGGAASFPRW 435


>gi|268315717|ref|YP_003289436.1| WD40 domain-containing protein beta Propeller [Rhodothermus marinus
           DSM 4252]
 gi|262333251|gb|ACY47048.1| WD40 domain protein beta Propeller [Rhodothermus marinus DSM 4252]
          Length = 970

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 6/109 (5%)

Query: 262 APRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIV 317
           AP F+ +G+R A +SV  D A  +  +DL++ A  R T     ++   +  + PD   +V
Sbjct: 393 APTFAPDGRRLAFVSV-ADGAAHLQVLDLEAGAV-RWTKAFPASVRIGTVRWRPDGRALV 450

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           F+   EG+ +  V+    +D   +  D       PVWSP+G  +AFT  
Sbjct: 451 FDRFVEGRRRDLVLWYPETDSLVVLTDGRHDDRGPVWSPEGRHLAFTSL 499


>gi|208822605|ref|ZP_03262924.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4042]
 gi|208738090|gb|EDZ85773.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4042]
          Length = 169

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 70/167 (41%), Gaps = 43/167 (25%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y +  NG
Sbjct: 1   MSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 60

Query: 336 SDQKRI----SQDKEA------------------------------------SYFD--PV 353
              +RI    SQ+++A                                    ++ D  P 
Sbjct: 61  GAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPS 120

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
            +P G ++ ++   G    + ++  DG  + RL   D  ++ P WSP
Sbjct: 121 LAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSP 167


>gi|327402631|ref|YP_004343469.1| peptidase S41 [Fluviicola taffensis DSM 16823]
 gi|327318139|gb|AEA42631.1| peptidase S41 [Fluviicola taffensis DSM 16823]
          Length = 1088

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 88/196 (44%), Gaps = 32/196 (16%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           G    + +AP    NGK  + +   D    +++V L++  T+++TNT     + S+SPD 
Sbjct: 323 GGASEIAVAP----NGKEVVFTNHGD----VFTVSLENGVTKQITNTPEEERNVSFSPDG 374

Query: 314 SQIVFESDREG-----------KEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLI 361
             I++ S+R             KE  Y   S    ++  I  DKE+  F P +SP G  I
Sbjct: 375 KAILYASERNKIWGIYQTTMIRKEDAYFYVSTLLKEEALIVTDKES--FQPQYSPDGKEI 432

Query: 362 AFTKFSGEKFAIGVMKKDGSQER-LLVEDSNL------QAPTWSPSGRSLIFSRKKDGDT 414
           AF +    + A+ V      + R +L E  N       Q   W+P  + ++ S  +DG+ 
Sbjct: 433 AFLE---NRTAVSVYNLASKKIRNVLPETKNYSYSDGDQTFNWAPDSKYILVSFLQDGNW 489

Query: 415 GSKLYSIDLNGRNETL 430
             ++  +D++G    L
Sbjct: 490 HEQIGLVDVSGGKPML 505



 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 25/190 (13%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           ++   +M  R+   P+        +  P  S +GK  + + + D    IY V        
Sbjct: 9   MIGAMIMSLRMPTPPQEASTNPLWMRYPVISPDGKTIVFTYKGD----IYQVPAAGGVAA 64

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-- 353
            +T +   +    +SPD   I F SDR G   ++ +   G   KR++      Y   +  
Sbjct: 65  PVTLSGAHDFMPVFSPDGKTIYFASDRHGNFDVFSVPLQGGATKRLTFHSSNDYPQCLSD 124

Query: 354 -------WSPQGDLIAFTKFS----GEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPS 400
                   + +GD  A ++F     GE +++G+   DG +E+  L +   N++   W+ +
Sbjct: 125 DGKRIIFIAARGDNAAMSQFPYGALGEVYSVGI---DGGREKQELSITAENIK---WNKA 178

Query: 401 GRSLIFSRKK 410
           G  ++F  KK
Sbjct: 179 GTKMLFHDKK 188


>gi|149918086|ref|ZP_01906579.1| WD40-like Beta Propeller [Plesiocystis pacifica SIR-1]
 gi|149821091|gb|EDM80497.1| WD40-like Beta Propeller [Plesiocystis pacifica SIR-1]
          Length = 399

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 61/157 (38%), Gaps = 42/157 (26%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIY  +   +  + L  +   +  A+ SP    IVF S R+G  +LYVM  +G + +R+
Sbjct: 180 FDIYVANADGSDPKVLAASPGYDAEATVSPAGDTIVFTSTRDGDPELYVMDIDGQNLRRL 239

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEK------------------------------F 371
           +            +P  D  AF  F G+K                               
Sbjct: 240 TN-----------APGYDGGAFFSFDGKKIIWRANRPTTADEQAKYTELREEGLVRPTAL 288

Query: 372 AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFS 407
            + VM  DGS++R++  +      P W P G  +IFS
Sbjct: 289 ELMVMNADGSEQRVITNNGAANFGPFWHPDGERVIFS 325



 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 30/165 (18%)

Query: 275 SVQKDEAMD-IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           S + D   D I+++DL+   T  ++        A + P   +IV           Y    
Sbjct: 108 STRGDMGCDQIFTMDLEGRGTTMVSTGKGRTTCAYFLPKDERIV-----------YASTH 156

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             +D      D+   Y   VW              ++F I V   DGS  ++L       
Sbjct: 157 AAADDCLPPPDRSKGY---VWKLY-----------DEFDIYVANADGSDPKVLAASPGYD 202

Query: 394 A-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAY 436
           A  T SP+G +++F+  +DGD   +LY +D++G+N   L N P Y
Sbjct: 203 AEATVSPAGDTIVFTSTRDGD--PELYVMDIDGQNLRRLTNAPGY 245



 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 21/119 (17%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--- 322
           S  G   + +  +D   ++Y +D+      RLTN    +  A +S D  +I++ ++R   
Sbjct: 208 SPAGDTIVFTSTRDGDPELYVMDIDGQNLRRLTNAPGYDGGAFFSFDGKKIIWRANRPTT 267

Query: 323 --------EGKE---------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
                   E +E         +L VM ++GS+Q+ I+ +  A+ F P W P G+ + F+
Sbjct: 268 ADEQAKYTELREEGLVRPTALELMVMNADGSEQRVITNNG-AANFGPFWHPDGERVIFS 325


>gi|159901323|ref|YP_001547570.1| hypothetical protein Haur_4812 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159894362|gb|ABX07442.1| hypothetical protein Haur_4812 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 362

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 10/130 (7%)

Query: 309 YSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +SPD  ++V    RE     + +L +       Q  ++   +   F PVWSP G  IAF 
Sbjct: 217 WSPDDQRLVISVLRESQAGFRNELILFDLMTEQQTPLTSQTDTDDFTPVWSPDGTKIAFV 276

Query: 365 KFSGE--KFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDG--DTGSKL 418
           + + E  +  I V+  DGS+ R +          P W+P  + L+++R   G  +  S +
Sbjct: 277 RRTREVPRGEIWVVNADGSEPRAITAGGGYDNVDPQWTPDSQQLLWTRLTVGSANVPSAI 336

Query: 419 YSIDLNGRNE 428
           ++++L   +E
Sbjct: 337 WTVNLAENSE 346


>gi|53711360|ref|YP_097352.1| putative Tricorn-like protease [Bacteroides fragilis YCH46]
 gi|52214225|dbj|BAD46818.1| putative Tricorn-like protease [Bacteroides fragilis YCH46]
          Length = 1090

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 18/140 (12%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + + G    R++   + SY   P+WSP    IAF     
Sbjct: 31  SPDGTEIAFCY----KGDIYKVSAGGGTAIRLTT--QPSYECTPIWSPDSKQIAFASDRN 84

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS---------KL 418
             F I VM   G   + L   S+ + P+ ++P G+ ++FS      + S         +L
Sbjct: 85  GNFDIFVMPATGGTAQRLTTHSSSELPSAFTPDGKYILFSASIQDPSQSALFPTTAMTEL 144

Query: 419 YSIDLN-GRNETLINTPAYA 437
           Y + +N GR E ++ TPA A
Sbjct: 145 YKVPVNGGRTEQVLGTPAEA 164


>gi|150007868|ref|YP_001302611.1| putative peptidase/protease family protein [Parabacteroides
           distasonis ATCC 8503]
 gi|149936292|gb|ABR42989.1| putative peptidase/protease family protein [Parabacteroides
           distasonis ATCC 8503]
          Length = 1080

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 18/138 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + + G    +++   +ASY   P+WSP G  IAF     
Sbjct: 30  SPDGTEIAFCY----KGDIYKVPAKGGTATQLT--TQASYECTPIWSPDGKQIAFASDRN 83

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS---------KL 418
             F + VM  +G   + L   S  + P+ ++P G+ ++FS        S         +L
Sbjct: 84  GNFDLFVMPSNGGTAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTEL 143

Query: 419 YSIDL-NGRNETLINTPA 435
           Y + +  GR E ++ TPA
Sbjct: 144 YKVPVGGGRTEQVLGTPA 161



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  +     +LT       +  +SPD  QI F SDR G   L+VM SNG   + ++
Sbjct: 43  DIYKVPAKGGTATQLTTQASYECTPIWSPDGKQIAFASDRNGNFDLFVMPSNGGTAQCLT 102

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++P G  + F+
Sbjct: 103 T-HSASEIPSAFTPDGKYVLFS 123



 Score = 40.0 bits (92), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 87/201 (43%), Gaps = 34/201 (16%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +GK+  ++++ +    ++      N T+++T+T        +SPD+  + + S+R G 
Sbjct: 322 SPDGKQIALTLRGE----VFVTSADYNTTKQITHTPAAETGVCFSPDNRTLAYASERGGN 377

Query: 326 EQLYVMQSNGSDQKRI-------------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            QLY+ +    ++                S+  E +Y  P +SP G  +AF +   ++  
Sbjct: 378 WQLYLAKIARKEEANFPNATIIEEEVLLPSKTVERNY--PQFSPDGKELAFIE---DRMR 432

Query: 373 IGVMKKDGSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDL--- 423
           + V+  +  + R + + S   +       +WSP G+   F+ +  G+       I L   
Sbjct: 433 LMVVNLETKKVRQVTDGSTWYSTAGGFDYSWSPDGK--WFTLRFIGNKHDPYSDIGLVSA 490

Query: 424 -NGRNETLINTPAYASDPQWV 443
             G    L N+   ++ PQWV
Sbjct: 491 QGGEITNLTNSGYTSTSPQWV 511


>gi|218961137|ref|YP_001740912.1| putative tricorn protease (tri); putative signal peptide
           [Candidatus Cloacamonas acidaminovorans]
 gi|167729794|emb|CAO80706.1| putative tricorn protease (tri); putative signal peptide
           [Candidatus Cloacamonas acidaminovorans]
          Length = 1053

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 15/161 (9%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D++ V        R+TNT     +  +SPD   + F SDR G+  +Y+M + G + K ++
Sbjct: 49  DLWLVPFAGGIPRRITNTTSYEWNPQFSPDGKMLAFSSDRSGQNLIYIMPATGGEAKAVN 108

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK--DGSQERLLVEDSNLQAPTWSPS 400
            +   S+    W      +  TK+S  ++ +   K   +GS+  LL E  +  A T SP 
Sbjct: 109 YE---SFRISEWFSDSQNLLCTKYS-PRWGLSFYKVPINGSRPVLLAEIGSSFA-TLSPD 163

Query: 401 GRSLIF-----SRKKD--GDTGSKLYSIDLNGRNET-LINT 433
            + ++F     SR++   G    +L+ IDL  +  T L NT
Sbjct: 164 NKQIVFQKGGYSRREAYRGSGNGELWLIDLPTKKYTKLTNT 204


>gi|323343852|ref|ZP_08084079.1| tricorn family protease MdsD [Prevotella oralis ATCC 33269]
 gi|323095671|gb|EFZ38245.1| tricorn family protease MdsD [Prevotella oralis ATCC 33269]
          Length = 1102

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 22/138 (15%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +S SPD + I F      K  ++ +   G + ++++ +     + P+WSP G+ IAF   
Sbjct: 62  SSISPDGTTIAFSY----KGDIFTIPVQGGNARQLTSNAAYESY-PIWSPDGERIAFVST 116

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWS------------PSGRSLIFSRKKDGD 413
               + I VM KDG + + L  DS  + P TW             P+ +S+ F+  +   
Sbjct: 117 REGSYDIYVMSKDGGEPKRLTTDSGNEIPMTWRDNEHILFETTGMPTAKSIYFASSQ--- 173

Query: 414 TGSKLYSIDLNGRNETLI 431
              ++Y  D+ G    L+
Sbjct: 174 -FPQVYETDVKGSRPRLV 190



 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 34/62 (54%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI+++ +Q     +LT+         +SPD  +I F S REG   +YVM  +G + KR++
Sbjct: 78  DIFTIPVQGGNARQLTSNAAYESYPIWSPDGERIAFVSTREGSYDIYVMSKDGGEPKRLT 137

Query: 343 QD 344
            D
Sbjct: 138 TD 139



 Score = 44.7 bits (104), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 77/180 (42%), Gaps = 21/180 (11%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY--VMQSNGSDQKR 340
           D+Y   +    T+++T+T     S  ++PD   I + S+R G  Q+Y   +++ G  Q  
Sbjct: 365 DVYVTSIDYRTTKQITDTPEQERSIDFAPDGRSIAYASERNGLWQIYQTTIKNKGEKQFT 424

Query: 341 ISQDKE--------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK------DGSQERLL 386
            + D E        ++ F P++SP G  IAF +      A+ +  K      DG +    
Sbjct: 425 YATDLEETQLVKSDSTSFQPLYSPDGKSIAFLENRNTLRAVDLKSKTVRTLMDG-KYNYS 483

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDPQWV 443
             D ++   TWSP  R L+ S    G   +K   L S   NG    L  +     + +WV
Sbjct: 484 YSDGDVWC-TWSPDSRWLLASYIGYGGWNNKDIALVSASGNGEIYNLTESGYNDGNGKWV 542


>gi|256840125|ref|ZP_05545634.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739055|gb|EEU52380.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 1080

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 18/138 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + + G    +++   +ASY   P+WSP G  IAF     
Sbjct: 30  SPDGTEIAFCY----KGDIYKVPAKGGTATQLT--TQASYECTPIWSPDGKQIAFASDRN 83

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS---------KL 418
             F + VM  +G   + L   S  + P+ ++P G+ ++FS        S         +L
Sbjct: 84  GNFDLFVMPSNGGTAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTEL 143

Query: 419 YSIDL-NGRNETLINTPA 435
           Y + +  GR E ++ TPA
Sbjct: 144 YKVPVGGGRTEQVLGTPA 161



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  +     +LT       +  +SPD  QI F SDR G   L+VM SNG   + ++
Sbjct: 43  DIYKVPAKGGTATQLTTQASYECTPIWSPDGKQIAFASDRNGNFDLFVMPSNGGTAQCLT 102

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++P G  + F+
Sbjct: 103 T-HSASEIPSAFTPDGKYVLFS 123



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 30/184 (16%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI- 341
           +++      N T+++T+T        +SPD+  + + S+R G  QLY+ +    ++    
Sbjct: 335 EVFVTSADYNTTKQITHTPAAETGICFSPDNRTLAYASERGGNWQLYLAKIARKEEANFP 394

Query: 342 ------------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                       S+  E +Y  P +SP G  +AF +   ++  + V+  +  + R + + 
Sbjct: 395 NATIIEEEVLLPSKTVERNY--PQFSPDGKELAFIE---DRMRLMVVNLETKKVRQVTDG 449

Query: 390 SNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDL----NGRNETLINTPAYASD 439
           S   +       +WSP G+   F+ +  G+       I L     G    L N+   ++ 
Sbjct: 450 STWYSTAGGFDYSWSPDGK--WFTLRFIGNKHDPYSDIGLVSAQGGEITNLTNSGYTSTS 507

Query: 440 PQWV 443
           PQWV
Sbjct: 508 PQWV 511


>gi|332798918|ref|YP_004460417.1| copper amine oxidase-like domain-containing protein
           [Tepidanaerobacter sp. Re1]
 gi|332696653|gb|AEE91110.1| copper amine oxidase-like domain-containing protein
           [Tepidanaerobacter sp. Re1]
          Length = 571

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 15/148 (10%)

Query: 295 ERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           ++LT++ ++ +   +S D   + ++  S       L+V++++G    ++  D E  Y DP
Sbjct: 185 KQLTDSGYVEL-IGWSADGEWLSYKYASSESAPAYLWVVRADGKAASQV--DTEPIYGDP 241

Query: 353 VWSPQGDLIAFT--KFSGEKF-AIGVMK-----KDGSQERLLVEDSNLQAPT--WSPSGR 402
           +WSP+ D IA+T  K S + +   GV++      +G +   L+E+ ++  P+  W P G 
Sbjct: 242 LWSPKDDRIAYTVMKDSTDGYIPAGVVRYADITAEGIKANTLLEEDSITIPSLAWHPGGE 301

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           S+  S  +  +    L  ++L G    L
Sbjct: 302 SITISFPRTAEQPPTLVQVNLAGEQTVL 329


>gi|221311165|ref|ZP_03593012.1| hypothetical protein Bsubs1_17491 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315492|ref|ZP_03597297.1| hypothetical protein BsubsN3_17407 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320407|ref|ZP_03601701.1| hypothetical protein BsubsJ_17370 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324691|ref|ZP_03605985.1| hypothetical protein BsubsS_17521 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767740|ref|NP_391103.2| acylaminoacyl-peptidase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|251757426|sp|P39839|YUXL_BACSU RecName: Full=Uncharacterized peptidase yuxL
 gi|225185368|emb|CAB15213.2| putative acylaminoacyl-peptidase [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 657

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 8/118 (6%)

Query: 263 PRFSSNGKRA-LISVQKDEAMDIYSVDL-----QSNATERLTNTLFINISASYSPDSSQI 316
           P+++ +G RA  +  Q ++  D Y+ ++     ++  +   T+    +    +SPD   +
Sbjct: 19  PQYAPDGTRAAYVKSQVNQEKDSYTSNIWIYETKTGGSVPWTHGEKRSTDPRWSPDGRTL 78

Query: 317 VFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            F SDREG   QLY+M + G + ++++ D       P+WSP G+ I  T   GE  +I
Sbjct: 79  AFISDREGDAAQLYIMSTEGGEARKLT-DIPYGVSKPLWSPDGESILVTVSLGEGESI 135



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 69/149 (46%), Gaps = 10/149 (6%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +PR+SP+ + +A+ +  + D  ++Y+M T    A +++ +    +  P +S +G+  L++
Sbjct: 68  DPRWSPDGRTLAFISDREGDAAQLYIMSTEGGEA-RKLTDIPYGVSKPLWSPDGESILVT 126

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           V   E     S+D +    +     + +    SY  D   +     R    QL ++    
Sbjct: 127 VSLGEGE---SIDDREKTEQDSYEPVEVQ-GLSYKRDGKGLT----RGAYAQLVLVSVKS 178

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + K ++  K A + DP +SP G  + F+
Sbjct: 179 GEMKELTSHK-ADHGDPAFSPDGKWLVFS 206


>gi|291485687|dbj|BAI86762.1| hypothetical protein BSNT_04770 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 657

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 8/114 (7%)

Query: 263 PRFSSNGKRA-LISVQKDEAMDIYSVDL-----QSNATERLTNTLFINISASYSPDSSQI 316
           P+++ +G RA  +  Q ++  D Y+ ++     ++  +   T+    +    +SPD   +
Sbjct: 19  PQYAPDGTRAAYVKSQVNQEKDSYTSNIWIYETKTGGSVPWTHGEKRSTDPRWSPDGCTL 78

Query: 317 VFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            F SDREG   QLY+M + G + ++++ D       P+WSP G+ I  T   GE
Sbjct: 79  AFISDREGDAAQLYMMSAEGGEARKLT-DIPYGVSKPIWSPDGESILVTVSLGE 131


>gi|116624085|ref|YP_826241.1| peptidase S9B dipeptidylpeptidase IV subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116227247|gb|ABJ85956.1| peptidase S9B, dipeptidylpeptidase IV domain protein [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 577

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 15/176 (8%)

Query: 263 PRFSSNGKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           P  S +GKR   S +   K  A  ++  +L S    +LT     +I+  +SPD   + F 
Sbjct: 54  PSISPDGKRLAYSARESSKVSAFHVFVRELPSGKPLQLTKGEGNDIAPVWSPDGGTLAFV 113

Query: 320 SDREGKEQLYVMQSNGSDQKRISQ-----DKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              +GK +  VM ++G D+++I++     D      +  W P    +   + +GEK   G
Sbjct: 114 RVEDGKRECIVMPADGGDERKIAELGAAADSTQPAPEVSWKPDSKSLVVVQ-NGEKQLPG 172

Query: 375 V--MKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +  +  DG  +R+       +    P  + SG S+ F R    D G+ ++  D  G
Sbjct: 173 LATLTLDGKLQRITNPGEGTEGDSTPAVAASGSSIAFVRHTQND-GADIFLCDATG 227



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 7/106 (6%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---TK 365
           +SPD +++   SD+ G E+++V  +NG D+ +I+Q K        WSP    + F   T 
Sbjct: 334 WSPDGTRVADVSDQTGSEEIFVSDANGQDRVQITQFKGPRVKSVRWSPDSKGLIFDLSTD 393

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              E FA+           LL    N    ++S  G+++ F  + +
Sbjct: 394 HGWEVFAVPATAGQKPVRVLL----NANNASYSHDGKTIYFQSRGE 435


>gi|321312767|ref|YP_004205054.1| putative acylaminoacyl-peptidase [Bacillus subtilis BSn5]
 gi|320019041|gb|ADV94027.1| putative acylaminoacyl-peptidase [Bacillus subtilis BSn5]
          Length = 657

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 8/118 (6%)

Query: 263 PRFSSNGKRA-LISVQKDEAMDIYSVDL-----QSNATERLTNTLFINISASYSPDSSQI 316
           P+++ +G RA  +  Q ++  D Y+ ++     ++  +   T+    +    +SPD   +
Sbjct: 19  PQYAPDGTRAAYVKSQVNQEKDSYTSNIWIYETKTGGSVPWTHGEKRSTDPRWSPDGRTL 78

Query: 317 VFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            F SDREG   QLY+M + G + ++++ D       P+WSP G+ I  T   GE  +I
Sbjct: 79  AFISDREGDAAQLYIMSTEGGEARKLT-DIPYGVSKPLWSPDGESILVTVSLGEGESI 135



 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 10/149 (6%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +PR+SP+ + +A+ +  + D  ++Y+M T    A +++ +    +  P +S +G+  L++
Sbjct: 68  DPRWSPDGRTLAFISDREGDAAQLYIMSTEGGEA-RKLTDIPYGVSKPLWSPDGESILVT 126

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           V   E     S+D +    +     + +  S SY  D   +     R    QL ++    
Sbjct: 127 VSLGEGE---SIDDREKTEQDSYEPVEVQ-SLSYKRDGKGLT----RGAYAQLVLVSVKS 178

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + K ++  K A + DP +SP G  + F+
Sbjct: 179 GEMKELTSHK-ADHGDPAFSPDGKWLVFS 206


>gi|225874010|ref|YP_002755469.1| peptidase, S9A/B/C family [Acidobacterium capsulatum ATCC 51196]
 gi|225793254|gb|ACO33344.1| peptidase, S9A/B/C family [Acidobacterium capsulatum ATCC 51196]
          Length = 696

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/246 (23%), Positives = 101/246 (41%), Gaps = 57/246 (23%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V+DR G   R LT  +   L    +SP+ +++         +L ++   T        
Sbjct: 120 VWVLDRRGGEARQLTDVKKGDLENYAWSPDSKEL---------LLTIHTGGT-------- 162

Query: 253 IGNFRSMILAPRFSSNGKRALIS----------------VQKDEAMDIYSVDLQSNATER 296
                  + A  F+  GK  LI                 +  D+   +Y  D+ +   E+
Sbjct: 163 -------VSANDFNDPGKHKLIPPIVMTRYHFKQDVEGYLTADDHTYLYLYDIATGKMEK 215

Query: 297 LTNTLFINIS-ASYSPDSSQIVF------ESDREGKEQLYVMQS-NGSDQKRISQDKEAS 348
           LT     N S   +SPD  +I F      E DR     ++V+ + +G++ ++++    A 
Sbjct: 216 LTAGKQYNESDGVWSPDGKEIAFVSNHTAEPDRNINTDIFVVAAKHGAEPRQLTHYTGAD 275

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQ-ERLLVE--DSNLQAPTWSP 399
                WSP G LIAF +    K+       +GV+  DGS   R+L    D  + +P +S 
Sbjct: 276 AGPLSWSPDGKLIAFLRGGHVKYWQYQENHLGVIAADGSSPARILTSKFDRPVHSPQFSS 335

Query: 400 SGRSLI 405
            G+S++
Sbjct: 336 DGKSIM 341


>gi|154687335|ref|YP_001422496.1| YuxL [Bacillus amyloliquefaciens FZB42]
 gi|154353186|gb|ABS75265.1| YuxL [Bacillus amyloliquefaciens FZB42]
          Length = 658

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 263 PRFSSNGKRA-LISVQKDEAMDIYS-----VDLQSNATERLTNTLFINISASYSPDSSQI 316
           P+++ +G+RA  +    +   D YS      D +S  +   T     N S  +SPD  ++
Sbjct: 19  PQYAPDGRRAAYVRTTVNHKRDSYSSAIMIYDTESGISNPWTFGDNRNTSPRWSPDGRRL 78

Query: 317 VFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAI 373
            F SDRE G  QLY++ + G + K+ + D      DP+W+P G   L++ +  S E+   
Sbjct: 79  AFVSDRENGVPQLYIIDAAGGEAKQ-AADIPWGVSDPIWAPDGRSVLVSVSLTSAERADE 137

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              KK    E +     ++Q+ T+   G+ L+
Sbjct: 138 KEKKKHDEYEPV-----DIQSLTYKRDGKGLL 164



 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 58/270 (21%), Positives = 106/270 (39%), Gaps = 67/270 (24%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PR+SP+ +++A+ +  +  + ++Y++D     A K+  +    +  P ++ +G+  L+SV
Sbjct: 69  PRWSPDGRRLAFVSDRENGVPQLYIIDAAGGEA-KQAADIPWGVSDPIWAPDGRSVLVSV 127

Query: 277 Q----------------KDEAMDIYS--------------------VDLQSNATERLTNT 300
                            + E +DI S                    + L++   ++LT+ 
Sbjct: 128 SLTSAERADEKEKKKHDEYEPVDIQSLTYKRDGKGLLNGSWAQLVLIHLETGEIQQLTDH 187

Query: 301 LFINISASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
              +  A++SPD  Q+ F +      D      +Y+M       K+I+  +  S+   V+
Sbjct: 188 EADHYDAAFSPDGRQLAFTANLCELGDAGKPSDVYLMNLADGSLKQITPHR-GSFGSCVF 246

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKK----DGSQERL--------------LVEDSNLQA-- 394
           SP G  IA      E F    ++K    D   ERL              L+ DS +    
Sbjct: 247 SPDGSYIAMLGHENE-FRNATLEKAWLYDVKTERLSCLTDMLDVHLSDALIADSIIGGVT 305

Query: 395 --PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             P W+  G+       + G TG    SID
Sbjct: 306 PRPVWTNDGQGFYVLGSEQGSTGIYYISID 335


>gi|218887448|ref|YP_002436769.1| Tol-Pal system beta propeller repeat protein TolB [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218758402|gb|ACL09301.1| Tol-Pal system beta propeller repeat protein TolB [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 446

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 8/112 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           TRI R+    GN+ +   AP  S +G     +   D    I+  D+ + +  ++T     
Sbjct: 339 TRISRS----GNYNT---APSISPDGTLIAFARMTDFGHRIFVYDMVTQSERQVTFGPGT 391

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           + + S++PDS  + F S R G +Q+Y++  +G D KR+      + F P W 
Sbjct: 392 DETPSFAPDSYFLAFTSTRSGAKQIYLITRHGGDAKRVPTGAGDASF-PDWG 442


>gi|116625010|ref|YP_827166.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228172|gb|ABJ86881.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 896

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 14/130 (10%)

Query: 247 DRAPKRIGNF--RSMILAPRFSSNGKRALISVQKDEAM---DIYSVDLQSNATERLTNTL 301
           DRA  R+G     +    P  S +G+   + V +D A    DI+  DL    + RLT   
Sbjct: 615 DRAGNRLGTVGPSADYTNPALSPDGRLLAVCV-RDPATRKRDIWVYDLARGTSSRLTFDP 673

Query: 302 FINISASYSPDSSQIVFESDREGKEQLY--VMQSNGSDQK--RISQDKEASYFDPVWSPQ 357
             + + ++SPD   I+F SDR+G   LY  +    G D+   +  +DK   +    W+P 
Sbjct: 674 ADDFNPTWSPDGQSIIFASDRKGARDLYRKLASGTGPDEPLFQSGEDKSPEH----WTPD 729

Query: 358 GDLIAFTKFS 367
           G  + F   S
Sbjct: 730 GKFLLFNTGS 739


>gi|218129210|ref|ZP_03458014.1| hypothetical protein BACEGG_00785 [Bacteroides eggerthii DSM 20697]
 gi|317475185|ref|ZP_07934452.1| hypothetical protein HMPREF1016_01431 [Bacteroides eggerthii
           1_2_48FAA]
 gi|217988588|gb|EEC54908.1| hypothetical protein BACEGG_00785 [Bacteroides eggerthii DSM 20697]
 gi|316908638|gb|EFV30325.1| hypothetical protein HMPREF1016_01431 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 1089

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 18/140 (12%)

Query: 310 SPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y V    G+  +  +QD   S  +P+WSP G  IAF     
Sbjct: 31  SPDGTEIAFCY----KGDIYKVPAKGGAATQLTTQDSYES--NPIWSPDGRQIAFASDRY 84

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS---------KL 418
             F + VM  +G   + L  +S  + P+ ++P G+ ++FS        S         +L
Sbjct: 85  GNFDVFVMPANGGAAQRLTTNSTGETPSAFTPDGKYILFSAAIQDPVESALFPRSAMTEL 144

Query: 419 YSIDL-NGRNETLINTPAYA 437
           Y + +  GR E ++ TPA A
Sbjct: 145 YKVPVTGGRTEQVLGTPAEA 164



 Score = 44.7 bits (104), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  +  A  +LT       +  +SPD  QI F SDR G   ++VM +NG   +R++
Sbjct: 44  DIYKVPAKGGAATQLTTQDSYESNPIWSPDGRQIAFASDRYGNFDVFVMPANGGAAQRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
            +         ++P G  I F+
Sbjct: 104 TNSTGE-TPSAFTPDGKYILFS 124



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 9/68 (13%)

Query: 352 PVW------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           P+W      SP G  IAF  + G+ +   V  K G+  +L  +DS    P WSP GR + 
Sbjct: 22  PLWMRDIQISPDGTEIAFC-YKGDIYK--VPAKGGAATQLTTQDSYESNPIWSPDGRQIA 78

Query: 406 FSRKKDGD 413
           F+  + G+
Sbjct: 79  FASDRYGN 86


>gi|255013432|ref|ZP_05285558.1| putative peptidase/protease family protein [Bacteroides sp. 2_1_7]
          Length = 1071

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  +     +LT       +  +SPD  QI F SDR G   L+VM SNG   + ++
Sbjct: 34  DIYKVPAKGGTATQLTTQASYECTPIWSPDGKQIAFASDRNGNFDLFVMPSNGGTAQCLT 93

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               AS     ++P G  + F+
Sbjct: 94  T-HSASEIPSAFTPDGKYVLFS 114



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 18/138 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + + G    +++   +ASY   P+WSP G  IAF     
Sbjct: 21  SPDGTEIAFCY----KGDIYKVPAKGGTATQLT--TQASYECTPIWSPDGKQIAFASDRN 74

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS---------KL 418
             F + VM  +G   + L   S  + P+ ++P G+ ++FS        S         +L
Sbjct: 75  GNFDLFVMPSNGGTAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTEL 134

Query: 419 YSIDL-NGRNETLINTPA 435
           Y + +  GR E ++ TPA
Sbjct: 135 YKVPVGGGRTEQVLGTPA 152



 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 40/190 (21%), Positives = 80/190 (42%), Gaps = 42/190 (22%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +++      N T+++T+T        +SPD+  + + S+R G  QLY+         +I+
Sbjct: 326 EVFVTSADYNTTKQITHTPAAETGICFSPDNRTLAYASERGGNWQLYLA--------KIA 377

Query: 343 QDKEASYFD-------------------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           + +EA++ +                   P +SP G  +AF +   ++  + V+  +  + 
Sbjct: 378 RKEEANFPNATIIEEEVLLPSKTVERNYPQFSPDGKELAFIE---DRMRLMVVNLETKKV 434

Query: 384 RLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDL----NGRNETLINT 433
           R + + S   +       +WSP G+   F+ +  G+       I L     G    L N+
Sbjct: 435 RQVTDGSTWYSTAGGFDYSWSPDGK--WFTLRFIGNKHDPYSDIGLVSAQGGEITNLTNS 492

Query: 434 PAYASDPQWV 443
              ++ PQWV
Sbjct: 493 GYTSTSPQWV 502


>gi|118474869|ref|YP_892654.1| translocation protein TolB [Campylobacter fetus subsp. fetus 82-40]
 gi|118414095|gb|ABK82515.1| protein TolB [Campylobacter fetus subsp. fetus 82-40]
          Length = 421

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/213 (19%), Positives = 94/213 (44%), Gaps = 8/213 (3%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P+++   Q   Y T     +  +Y  D    +  K I     M++A   SS+G + L+++
Sbjct: 195 PKWANKDQSAFYYTTYINLVPTLYKYDLATGKKTK-ITQSGGMLVASDVSSDGTKVLLTM 253

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D+  DIY  D  +    R+T+   I+++ ++  + +++VF SDR G   ++    NG 
Sbjct: 254 APDDQSDIYIYDTTTKKKSRITDFKGIDVNGNFVDNDTRVVFVSDRLGYPNIFATSINGG 313

Query: 337 DQKRI-----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             +++     + +  ++Y + V     + +    +S + F + ++       R L     
Sbjct: 314 AVEQMVFHGKNNNSVSTYQNYVVYSSRESVG--DYSAKTFNLYLISTKSDYIRQLTSGGV 371

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              P +S  G S++F +    ++   +  ++ N
Sbjct: 372 NTYPRFSSDGGSIVFIKNAGNESAVGIIRVNEN 404


>gi|311746912|ref|ZP_07720697.1| MdsD protein [Algoriphagus sp. PR1]
 gi|126578602|gb|EAZ82766.1| MdsD protein [Algoriphagus sp. PR1]
          Length = 1077

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 62/277 (22%), Positives = 117/277 (42%), Gaps = 39/277 (14%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K SL +       +R+LT S+D ++    F  + +       +    L V +    +  +
Sbjct: 255 KQSLALTSLTDFPVRFLTISQDGLM---SFGYDGELYTLRKGESPKKLEVRIKTQAVSNS 311

Query: 250 PKRI---GNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              I   G  R M+++P    NGK  ALI+       +++   +  + T+R+TNT     
Sbjct: 312 DSYIAINGGVREMVISP----NGKEIALIA-----RGEVFVTSVDGSMTKRITNTPEQER 362

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSD----------QKRISQDKEASYFDPVWS 355
              +SPD   +V+ S+R+GK  +Y      S+          ++++   KE   ++P +S
Sbjct: 363 FLDFSPDGKSLVYSSERDGKWSIYSSSKIRSEEPYFFASTLIEEKVLVSKEVDVYEPDYS 422

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-------QAPTWSPSGRSLIFSR 408
           P G  +A+ +   ++  + VM  +  +   L+    L       Q  TWSP  + L+ + 
Sbjct: 423 PDGKKLAYVE---DRRTLKVMDLESQESVTLMTPDELFHMRDGDQYFTWSPDSKWLLATY 479

Query: 409 KKDGDTGSKLYSIDLNGRN--ETLINTPAYASDPQWV 443
                  S++  +D  G+   + L  +    S P WV
Sbjct: 480 NPTM-VNSEVVLLDATGKEPKKNLTKSGYGDSQPVWV 515



 Score = 40.0 bits (92), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 16/137 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD S I F      K  L+++ S G D K+++   EA  + PVWS  G+ +AF      
Sbjct: 35  SPDGSLIAFTF----KGDLFLVSSTGGDAKQLTF-HEAHDYKPVWSKDGEQLAFASDRYG 89

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIF-------SRKKDGDTGSK--LY 419
            F + +M   G     L   SN + P  +S   +++IF       +  +   TGS+  LY
Sbjct: 90  NFDVFIMSAQGGPATRLTFHSNDEQPFDFSADNQNVIFGATRMDIAEHRQYPTGSQPELY 149

Query: 420 SI-DLNGRNETLINTPA 435
            +   +GR + +   PA
Sbjct: 150 QVPKKSGRVDQIWTIPA 166



 Score = 36.6 bits (83), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 3/62 (4%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           P  SP G LIAFT F G+ F +     D  Q  L   +++   P WS  G  L F+  + 
Sbjct: 32  PAISPDGSLIAFT-FKGDLFLVSSTGGDAKQ--LTFHEAHDYKPVWSKDGEQLAFASDRY 88

Query: 412 GD 413
           G+
Sbjct: 89  GN 90


>gi|149276287|ref|ZP_01882431.1| WD40-like repeat/amidohydrolase domain protein [Pedobacter sp.
           BAL39]
 gi|149232807|gb|EDM38182.1| WD40-like repeat/amidohydrolase domain protein [Pedobacter sp.
           BAL39]
          Length = 1080

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 18/156 (11%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY + +       L+  +   +   +SP+   I + SD+ G + +++M  +GS +++++
Sbjct: 65  DIYVMPIIGGTATLLSGGIAWEVQPRFSPNGKYISYTSDKTGGDNIWIMNRDGSAKRQVT 124

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKFS-------GEKFAIGVMKKDGSQERLLVEDSNLQ- 393
           ++      +  W P  + LIA   ++       GE +   +   +G Q   L +  N Q 
Sbjct: 125 KETFRLLNNATWMPNSEYLIARKHYTGTRSLGAGEMWMYSIYGGEGVQ---LTKRKNDQQ 181

Query: 394 ---APTWSPSGRSLIFSRKKDGDTGSKL-YSIDLNG 425
               P  SPSGR L FS  +D   G    YS D NG
Sbjct: 182 DAGEPNVSPSGRYLYFS--EDMAPGPNFEYSKDPNG 215



 Score = 43.5 bits (101), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 23/204 (11%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           MI     S++GK  + +     A  +Y  +L +   ER+TN+         S D   +++
Sbjct: 357 MIRQLTTSADGKMVVFNA----AGYLYKKELPNGIPERVTNSNEFEFEPKISSDGKYVIY 412

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------- 371
            +  +  +         S +     D++  Y+ P +S +GD I F K  G +        
Sbjct: 413 ATWNDDLKGAIKRADLKSGKTTTLTDEKGFYYSPSYSSKGDKIVFRKGVGNEVLGYSYGR 472

Query: 372 --AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              I +M  +G   + LV D+ ++ P ++     + F    +G    K  SIDLNG NE 
Sbjct: 473 GTGIYLMSANGGA-KTLVSDNGIR-PQFNADDTRIYFQGYDNGKKAFK--SIDLNGANER 528

Query: 430 LINTPAYAS------DPQWVGFMD 447
              T  YA+      D +W+ F +
Sbjct: 529 THYTSTYANQFAPSPDGKWMAFTE 552



 Score = 43.1 bits (100), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 20/171 (11%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-IYSVDLQSNATERLTNTLFINISAS 308
           P+R+ N       P+ SS+GK  + +   D+    I   DL+S  T  LT+      S S
Sbjct: 388 PERVTNSNEFEFEPKISSDGKYVIYATWNDDLKGAIKRADLKSGKTTTLTDEKGFYYSPS 447

Query: 309 YSPDSSQIVFESDREGKEQL----------YVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           YS    +IVF     G E L          Y+M +NG  +  +S +       P ++   
Sbjct: 448 YSSKGDKIVFRKGV-GNEVLGYSYGRGTGIYLMSANGGAKTLVSDNG----IRPQFNADD 502

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFS 407
             I F  +   K A   +  +G+ ER     +  N  AP  SP G+ + F+
Sbjct: 503 TRIYFQGYDNGKKAFKSIDLNGANERTHYTSTYANQFAP--SPDGKWMAFT 551



 Score = 41.2 bits (95), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 27/171 (15%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI------LAPR 264
           ++  FEP+ S + + V YAT++D+       +   I RA  + G   ++        +P 
Sbjct: 395 NEFEFEPKISSDGKYVIYATWNDD-------LKGAIKRADLKSGKTTTLTDEKGFYYSPS 447

Query: 265 FSSNGKR---------ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           +SS G +          ++         IY +     A   +++     I   ++ D ++
Sbjct: 448 YSSKGDKIVFRKGVGNEVLGYSYGRGTGIYLMSANGGAKTLVSDN---GIRPQFNADDTR 504

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           I F+    GK+    +  NG++++       A+ F P  SP G  +AFT+ 
Sbjct: 505 IYFQGYDNGKKAFKSIDLNGANERTHYTSTYANQFAP--SPDGKWMAFTEL 553


>gi|225874499|ref|YP_002755958.1| peptidase, S41B (tricorn core protease) family [Acidobacterium
           capsulatum ATCC 51196]
 gi|225793616|gb|ACO33706.1| peptidase, S41B (tricorn core protease) family [Acidobacterium
           capsulatum ATCC 51196]
          Length = 1099

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 13/196 (6%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           E   SP+ +K+A   + D     VY+   +      RI     M  +  +S +  + + +
Sbjct: 349 EMALSPDGKKLAVIAHGD-----VYVTTEKDGGEAIRITRTPQMEASLHWSPDSTKLIYT 403

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +D   DIY  +   +   +LT+         ++PD   I +  DR+   Q++++    
Sbjct: 404 SMRDGNSDIYEYNFDGSKETQLTHGTAQCEHPRWNPDGKAIAYIRDRK---QVHLLTLAS 460

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQER---LLVEDSN 391
              + ++ DK  S  D  +SP GD +A+T +  + F  I V+   G   R    L     
Sbjct: 461 GKDEVLATDKMWSP-DLEFSPAGDWLAYTIYGYDGFRNIKVVPTKGGAARSITFLANGET 519

Query: 392 LQAPTWSPSGRSLIFS 407
                WSP G+ L+F+
Sbjct: 520 ADQMAWSPDGKYLLFA 535



 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 71/149 (47%), Gaps = 20/149 (13%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYS 310
           + +F  M L+P    +GK+  +    D    +Y V  + +  E  R+T T  +  S  +S
Sbjct: 344 VSHFSEMALSP----DGKKLAVIAHGD----VY-VTTEKDGGEAIRITRTPQMEASLHWS 394

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PDS+++++ S R+G   +Y    +GS + +++    A    P W+P G  IA+ +   ++
Sbjct: 395 PDSTKLIYTSMRDGNSDIYEYNFDGSKETQLTHGT-AQCEHPRWNPDGKAIAYIR---DR 450

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
             + ++     ++ +L  D       WSP
Sbjct: 451 KQVHLLTLASGKDEVLATDK-----MWSP 474



 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 49/239 (20%), Positives = 90/239 (37%), Gaps = 38/239 (15%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------FSS 267
           L +P  SP+ Q++A+A+  D            I   P + G+   +I  P       +S 
Sbjct: 58  LTQPALSPDGQEIAFASGGD------------IWTVPAKGGDAHLLISNPATESRPLYSP 105

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREG 324
           +G +      +    DIY + L +   +R+T    +    ++S D   I F    SD + 
Sbjct: 106 DGSKIAFISTRTGGGDIYVLTLATGQLQRITYGDTLEQLDAWSADGKWIYFTNGASDIDY 165

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI---------------AFTKFSGE 369
              +Y + + G     +S +   + F+   SP G  +                       
Sbjct: 166 NTDVYRVSAEGGTPMPVSAESYLAEFESAPSPDGKSVVMMAKGISDQQWWRDGHAHIDDT 225

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +     +   G+   L+ +D+    P WS SG+++ +   K G     L+S+  NG  E
Sbjct: 226 ELWWKSLAPGGAYRVLVPDDAKHAWPMWSASGKTIYYMSDKTGP--ENLWSVSSNGGAE 282



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 21/194 (10%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFE 319
           P +S++GK       K    +++SV     A ++LT+  F N   +  S       IVFE
Sbjct: 251 PMWSASGKTIYYMSDKTGPENLWSVSSNGGAEKQLTH--FTNGRVLWPSIGDHGKTIVFE 308

Query: 320 SD--------REGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEK 370
            +          GK +   ++  GS      + +  S+F +   SP G  +A     G+ 
Sbjct: 309 RELTIWKMNTATGKAEQVPVELRGSPSGLGVEHEAVSHFSEMALSPDGKKLAVIAH-GDV 367

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +     +KDG +   +     ++A   WSP    LI++  +DG+  S +Y  + +G  ET
Sbjct: 368 YV--TTEKDGGEAIRITRTPQMEASLHWSPDSTKLIYTSMRDGN--SDIYEYNFDGSKET 423

Query: 430 -LINTPAYASDPQW 442
            L +  A    P+W
Sbjct: 424 QLTHGTAQCEHPRW 437


>gi|297184122|gb|ADI20241.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 365

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 75/192 (39%), Gaps = 22/192 (11%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           FR     P     G+            DIY  DL  +  + L +    +  A+ SPD ++
Sbjct: 126 FRGDTACPAVPERGESGAYVWPIYADFDIYISDLNGHIVDTLISGPGYDAEATVSPDGTK 185

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQD---KEASYFDP--------VWSPQG------ 358
           IVF SDR G  +LY    +GS+  +++        ++F P           PQ       
Sbjct: 186 IVFTSDRSGDLELYTCDIDGSNIVQVTTGLGYDGGAFFSPDSKKLVFRSSRPQTEEEVKK 245

Query: 359 --DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTG 415
             DL++          I     DGS+   + +  N   AP + PSG  +IFS     + G
Sbjct: 246 YKDLLSQGMVEPTHMEIYTCNVDGSELTQVTQLGNANWAPFYHPSGTKIIFSTNHHSERG 305

Query: 416 S--KLYSIDLNG 425
               L+ I+ +G
Sbjct: 306 YPFNLFMINADG 317



 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 79/184 (42%), Gaps = 28/184 (15%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G + + +  +   +++Y+ D+  +   ++T  L  +  A +SPDS ++VF S R   
Sbjct: 180 SPDGTKIVFTSDRSGDLELYTCDIDGSNIVQVTTGLGYDGGAFFSPDSKKLVFRSSRPQT 239

Query: 326 E--------------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           E                    ++Y    +GS+  +++Q   A++  P + P G  I F+ 
Sbjct: 240 EEEVKKYKDLLSQGMVEPTHMEIYTCNVDGSELTQVTQLGNANW-APFYHPSGTKIIFST 298

Query: 366 FS----GEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFS--RKKDGDTGSKL 418
                 G  F + ++  DG+    +  D    A P +S     L+F+  R   G   + L
Sbjct: 299 NHHSERGYPFNLFMINADGTGLEQVTYDGVFDAFPMFSSDCSKLVFASNRNNGGSRATNL 358

Query: 419 YSID 422
           + +D
Sbjct: 359 FIVD 362


>gi|73669318|ref|YP_305333.1| hypothetical protein Mbar_A1812 [Methanosarcina barkeri str.
           Fusaro]
 gi|72396480|gb|AAZ70753.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 575

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 26/151 (17%)

Query: 308 SYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPV---------WSP 356
           S SPD  +I+  S   G    Q Y+  ++GS+ K      + SY+D           W P
Sbjct: 271 SLSPDRKKILLVSGLPGSFDLQTYISNTDGSELK-----GKISYYDGTEKRILTKEYWQP 325

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +   + +G  +   +++ D +++ LL +  N   P W P G+ ++F   K+     
Sbjct: 326 NGSCLLVNQ-NGNLY---LVEGDENKKSLLYK-GNASEPQWFPDGKKILFVEGKN----- 375

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           KLYSID++G N T I +    S   W  F D
Sbjct: 376 KLYSIDVDGTNLTFITSFGLTSSYFWDLFCD 406


>gi|255936369|ref|XP_002559211.1| Pc13g07820 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583831|emb|CAP91851.1| Pc13g07820 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 680

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 59/302 (19%), Positives = 114/302 (37%), Gaps = 93/302 (30%)

Query: 193 LCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRI 246
           L + + DG N R L   P  +   +   FSP+ + +++ +  D     DI RV+   + +
Sbjct: 79  LYIANADGTNERPLLKDPGYE---YHAEFSPDSEWISFTSERDGDGNSDIWRVHPDGSDL 135

Query: 247 DRAPKRIGNFRSMILAPRFSSNGK-RALISVQKDEAMDIYSVDLQSNATERLTNT----- 300
                      S++++P    NG   A +S       +I+  +L++ A   +T+T     
Sbjct: 136 QPIVTSPAAEDSVVISP----NGTLAAYVSTANTYNANIWVKNLETGAEWNITDTPNNRP 191

Query: 301 ----LFINISASYSPDSSQIVFESDR----EGKEQL----------------YVMQSNGS 336
               +  +   ++SPD + + F SDR    EG   L                Y+++ NGS
Sbjct: 192 REDMMRGHFRPAWSPDGNWLAFSSDRNTRWEGHGNLTYLGLAGWEHTQELDIYIIRPNGS 251

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------------------- 371
           D +R++         P WSP G  + F + +  +                          
Sbjct: 252 DLRRVAHRDSHCLGSPKWSPDGQRLIFYEMTRNETWDAHRPETVADANSTIVSVGINGND 311

Query: 372 --------------------AIGVMKKDGSQERLLV-----EDSNLQAPTWSPSGRSLIF 406
                                IG   K G++E L +      ++ +++P+WSP G+ +++
Sbjct: 312 RRIEVGGPGVKTFPQYVTNSTIGYHLKGGNKEGLYLTNGTYSNTTIRSPSWSPDGKYVVY 371

Query: 407 SR 408
            +
Sbjct: 372 EK 373


>gi|77164951|ref|YP_343476.1| WD-40-like beta propeller repeat-containing protein [Nitrosococcus
           oceani ATCC 19707]
 gi|254433763|ref|ZP_05047271.1| hypothetical protein NOC27_694 [Nitrosococcus oceani AFC27]
 gi|76883265|gb|ABA57946.1| WD40-like Beta Propeller [Nitrosococcus oceani ATCC 19707]
 gi|207090096|gb|EDZ67367.1| hypothetical protein NOC27_694 [Nitrosococcus oceani AFC27]
          Length = 367

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 60/267 (22%), Positives = 107/267 (40%), Gaps = 49/267 (18%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD DG N+R ++ S   +      +P+ Q + YA+         +L     D+ P +   
Sbjct: 96  MDADGKNVRQVS-SGKGVTTCSFIAPDDQAIIYAS--------THLAG---DQCPPK--- 140

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                  P +S      L      E  DI+  D +     RLT+T   +    YSP   +
Sbjct: 141 -------PDYSQGYVWPLY-----EGYDIFRADPEGGNRVRLTDTPGYDAEGVYSPKGDK 188

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDK---EASYF--DPVW------SPQGDLIAFT 364
           I+F S R G  +L++M  +GS+ ++++        ++F  D  W       P+G  +A  
Sbjct: 189 IIFTSARTGDLELFMMNPDGSEVEQLTDQPGYDGGAFFSRDGQWIVWRASRPEGKALADY 248

Query: 365 K-------FSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGS 416
           +           +  I +M  +  +   L ++      P W P G+ +IFS       G 
Sbjct: 249 QSLLKQGLIRPSQLEIFIMNLEERKPIQLTDNGAANFGPYWHPDGKHIIFSSNMHNPKGR 308

Query: 417 K--LYSIDLNGRN-ETLINTPAYASDP 440
              L+ I+++ R  E + + P +   P
Sbjct: 309 NFDLFLINVDTREIEQITHHPDFDGFP 335


>gi|197106224|ref|YP_002131601.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Phenylobacterium
           zucineum HLK1]
 gi|196479644|gb|ACG79172.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Phenylobacterium
           zucineum HLK1]
          Length = 654

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 7/175 (4%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDRE 323
           FS +G+R LIS       ++Y++     A + LTN+      +AS+ P   +I+F +D+ 
Sbjct: 72  FSPDGQRILISSDATGVFNVYALPAAGGAPQPLTNSKTDATFAASWFPSDERILFTADQG 131

Query: 324 GKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAIGVMKKD 379
           G E   LYV + +G  +     +K  + F   W+  GD   +   +   + F +      
Sbjct: 132 GNELNHLYVREPDGKVRDLTPGEKLKAQF-LGWNAAGDTFYVGSNERDPQTFDVYAYSAK 190

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               RL+  +S       S  GR     + +     + LY  DL G  E  + TP
Sbjct: 191 DYARRLVFRNSGYTVGAISRDGRRAALVKARS-SADNDLYLADLEGGGEPKLITP 244


>gi|86158162|ref|YP_464947.1| WD-40-like beta propeller repeat-containing protein
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774673|gb|ABC81510.1| WD-40 repeat-containing protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 1021

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 3/118 (2%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP  S +G+R    +Q+    D+     +     R+T+   ++   +++PD   ++F SD
Sbjct: 500 APSPSPDGQRIAFELQEGGRRDL--ALWEHGELRRVTDDDALDTGPAWTPDGRYLLFASD 557

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           R G   LY  ++     ++++ + E   F P  SP G  IAF  F  + + +  +  D
Sbjct: 558 RGGVYDLYAWEAATGAIRQVT-NVETGAFQPAVSPDGKTIAFVTFGRDGYDVATVPFD 614


>gi|307610341|emb|CBW99909.1| hypothetical protein LPW_16671 [Legionella pneumophila 130b]
          Length = 656

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 114/280 (40%), Gaps = 65/280 (23%)

Query: 210 RDQILFEPRFSPNQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIGNFR--SMILAPR 264
           R Q + EP  SP+ + VAY        ++I    +    +D    +   F   S    P+
Sbjct: 32  RIQDISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQQITFAEDSSSSLPK 91

Query: 265 FSSNGK--RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFE 319
           +S NGK    L    K+    I+   +Q N   +LT   +I+   S   +SPDS++I F 
Sbjct: 92  WSPNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLT---YIDGEVSDFTWSPDSNRIAFI 148

Query: 320 SDR---------------------------EGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           + +                           +G++ LY+++       +++      Y  P
Sbjct: 149 AQKSDPSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYL-P 207

Query: 353 VWSPQGDLIAFTKFSGE------KFAIGVMK-KDGSQERLLVE----------DSNLQAP 395
            WSP G  IAF    G+       + I +++ K G++ER L            DSNL   
Sbjct: 208 AWSPDGKYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKERQLTHFPGSDMNPDYDSNL--- 264

Query: 396 TWSPSGRSLIFSRKKDGD----TGSKLYSIDLNGRNETLI 431
           +WSP    + + R  +      + ++L  ID+N ++E +I
Sbjct: 265 SWSPDSSKIAYLRSNEHQWTYYSPNQLAIIDINTKDEKII 304


>gi|237724330|ref|ZP_04554811.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229437199|gb|EEO47276.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 1074

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 20/144 (13%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D+Y   L     ++LT+ +   + A +SPD   I F    +G  ++Y++ ++G + +R
Sbjct: 41  AGDLYKAPLNGGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGNTEVYLIPTDGGEPQR 100

Query: 341 IS------QDKEASYFDP-----VWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQER 384
           ++      +D       P      W+P G  I +       F G+ ++I   K  G  E 
Sbjct: 101 LTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGKLWSIS--KNGGMPEV 158

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSR 408
           + + +      ++SP G+ L ++R
Sbjct: 159 IPLPEGGFC--SYSPDGKKLAYNR 180



 Score = 43.1 bits (100), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF 318
           + A   S +G R +++ + +    ++ +  +   T  +T T   N     +SP+  QI +
Sbjct: 315 LTAASLSPDGHRLVVTARGE----VFDIPAEKGVTRDITRTPGANEREGEWSPNGKQIAY 370

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            SDR G+ ++++    G D  +++Q+ +      +WSP    I +T
Sbjct: 371 ISDRTGETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKKILYT 416


>gi|212692488|ref|ZP_03300616.1| hypothetical protein BACDOR_01984 [Bacteroides dorei DSM 17855]
 gi|212664963|gb|EEB25535.1| hypothetical protein BACDOR_01984 [Bacteroides dorei DSM 17855]
          Length = 1074

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 20/144 (13%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D+Y   L     ++LT+ +   + A +SPD   I F    +G  ++Y++ ++G + +R
Sbjct: 41  AGDLYKAPLNGGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGNTEVYLIPTDGGEPQR 100

Query: 341 IS------QDKEASYFDP-----VWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQER 384
           ++      +D       P      W+P G  I +       F G+ ++I   K  G  E 
Sbjct: 101 LTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGKLWSIS--KNGGMPEV 158

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSR 408
           + + +      ++SP G+ L ++R
Sbjct: 159 IPLPEGGFC--SYSPDGKKLAYNR 180



 Score = 43.1 bits (100), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF 318
           + A   S +G R +++ + +    ++ +  +   T  +T T   N     +SP+  QI +
Sbjct: 315 LTAASLSPDGHRLVVTARGE----VFDIPAEKGVTRDITRTPGANEREGEWSPNGKQIAY 370

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            SDR G+ ++++    G D  +++Q+ +      +WSP    I +T
Sbjct: 371 ISDRTGETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKKILYT 416


>gi|288922582|ref|ZP_06416761.1| serine/threonine protein kinase with PASTA sensor(s) [Frankia sp.
           EUN1f]
 gi|288346056|gb|EFC80406.1| serine/threonine protein kinase with PASTA sensor(s) [Frankia sp.
           EUN1f]
          Length = 497

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 89/195 (45%), Gaps = 22/195 (11%)

Query: 217 PRFSPNQQKVAYATYDDE-DILRVYLMDTR-IDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           P  SP+  +VAY   D E   +R    D+R +   P    +      +P FS +G    I
Sbjct: 276 PVLSPDASRVAYTNADGEITSVRTDGTDSRQVSDEPNGSSD------SPAFSPDG--GTI 327

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQS 333
           +  ++    +Y+V+   +   R   T+      ++S  S+QIV    R G +Q +YV+  
Sbjct: 328 AYARNIG-GVYAVNADGSGNRRRLATVSDAYELAWS-TSNQIVL---RRGDDQSIYVLSV 382

Query: 334 NGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           +  + +R++      A   +P WSP G  +AF   +G    I ++  DGS  R      +
Sbjct: 383 DDGNLRRLAGSPVPGAGAVEPAWSPDGGAVAFGVSTGG--GIYLVNADGSGLRQAAGPGS 440

Query: 392 LQAPTWSPSGRSLIF 406
              P+WSP G +L++
Sbjct: 441 WH-PSWSPQG-ALVY 453



 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 80/196 (40%), Gaps = 21/196 (10%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG + R ++   +     P FSP+   +AYA     +I  VY ++       +R+     
Sbjct: 300 DGTDSRQVSDEPNGSSDSPAFSPDGGTIAYA----RNIGGVYAVNADGSGNRRRLATVSD 355

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQ 315
                  +SN     I +++ +   IY + +      RL  +      A   ++SPD   
Sbjct: 356 AYELAWSTSN----QIVLRRGDDQSIYVLSVDDGNLRRLAGSPVPGAGAVEPAWSPDGGA 411

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-----AFTKFSGEK 370
           + F     G   +Y++ ++GS  +   Q      + P WSPQG L+     +  +F G  
Sbjct: 412 VAFGVSTGGG--IYLVNADGSGLR---QAAGPGSWHPSWSPQGALVYVQDGSAARFFGAN 466

Query: 371 FAIGVMKKDGSQERLL 386
             + +M  DG+  R L
Sbjct: 467 GTMRMMNPDGTGNRQL 482



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 19/163 (11%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           I  VD   N  ERL   L +  +   SPD+S++ + ++ +G  ++  ++++G+D +++S 
Sbjct: 258 IVVVDPTGN--ERL---LGLGDNPVLSPDASRVAY-TNADG--EITSVRTDGTDSRQVSD 309

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGR 402
           +   S   P +SP G  IA+ +  G  +A+     DGS   R L   S+     WS S +
Sbjct: 310 EPNGSSDSPAFSPDGGTIAYARNIGGVYAV---NADGSGNRRRLATVSDAYELAWSTSNQ 366

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP---AYASDPQW 442
             I  R+ D D    + S+D +G    L  +P   A A +P W
Sbjct: 367 --IVLRRGD-DQSIYVLSVD-DGNLRRLAGSPVPGAGAVEPAW 405


>gi|313681892|ref|YP_004059630.1| translocation protein tolb [Sulfuricurvum kujiense DSM 16994]
 gi|313154752|gb|ADR33430.1| translocation protein TolB [Sulfuricurvum kujiense DSM 16994]
          Length = 415

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 90/414 (21%), Positives = 173/414 (41%), Gaps = 46/414 (11%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           MKI L  L ++    F     A ++V       SP++I  +   + D L  K +++++ D
Sbjct: 1   MKIILIFLTLVQ---FSWGADATLEVVKGVGGLSPLAIEDSSLQTSD-LSRKFTQMLAAD 56

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           +    +F  + Q        +    P+ QD     AQ L+  R++ +G   +R      D
Sbjct: 57  MNVVSLFT-VDQSYASVPFNSLSPSPQHQD-----AQYLIRYRLVDDGAGGMRA-----D 105

Query: 133 VKDRKQIIGKKFFSSPASWRK------IAHTISDDIYQSITGEKGDFNSR-ILFVSESVV 185
           VK  +   G +FF+     ++      ++H I+ DI   + G   D+  R ++FV  +  
Sbjct: 106 VKMLQN--GNEFFAKSYILKQSEMAVFLSHAIAYDINAKLGGSPIDWIKRKVVFVRLTSP 163

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD--EDILRVYLMD 243
               K S  V+     + + +  S     F    +  Q +V Y +  D    I ++ L  
Sbjct: 164 ----KRSEIVVSDYTLSYQKVVMSGGMYGFAKWANSEQSEVYYTSLLDFKPTIYKLSLQS 219

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            + D+     G    M +    S + KR L+++  +   DIY  DL S A  ++TN   I
Sbjct: 220 GKKDKIVSSDG----MAVCSDVSEDSKRLLLTLAPNGQPDIYLFDLTSGAKTQITNYSGI 275

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +++  +  D S I F S+R G   ++  + N +    +SQ       +   S   + + +
Sbjct: 276 DVNGQFMGDGS-IAFVSNRLGYPNIFSTRMNST---AVSQLVYHGKNNSSLSSYKNFLVY 331

Query: 364 ------TKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
                   F+G  F + ++    G+ +RL     N   P +S  G ++++ +++
Sbjct: 332 KARENSATFAGNSFNLHLLSLNSGNVQRLTASGEN-DFPKFSYDGEAILYIKQE 384


>gi|322436331|ref|YP_004218543.1| peptidase S41 [Acidobacterium sp. MP5ACTX9]
 gi|321164058|gb|ADW69763.1| peptidase S41 [Acidobacterium sp. MP5ACTX9]
          Length = 1119

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 16/169 (9%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASY 309
           +RI N  + I     S  G RA+     +    I +V ++   T  LTNT   +    ++
Sbjct: 306 ERIENVSAEIEHAGISPTGIRAVFEAHGE----ILTVPVKHGPTRDLTNTPGAMERWPAW 361

Query: 310 SPDSSQIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +PD   I + SD  G   L+V   N  G  +K     + A YF P WSP    IAF    
Sbjct: 362 APDGQSIAYFSDESGLYALHVASQNDDGPVKKFPLAAEAAYYFQPKWSPDSKKIAFYDNR 421

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKD 411
              + + ++    S     V ++N  +       WSP  R L +SR +D
Sbjct: 422 LNLWMLDIVTGKLSH----VGENNFFSGIDRDYAWSPDSRWLAYSRTED 466



 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 3/83 (3%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP  S +G     S + D   D++++ +     +R+T    I++  +++PD  QI+F SD
Sbjct: 70  APVVSPDGSTIAFSGEYDGNTDVFTIPIAGGIPKRVTYHPSIDVPVAWTPDGKQIIFRSD 129

Query: 322 REGKE---QLYVMQSNGSDQKRI 341
           R+      QL+ +   G   K +
Sbjct: 130 RQATSRFAQLFEVAPTGGVAKLL 152



 Score = 42.0 bits (97), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 3/84 (3%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D+++VD +     RLT  + I  +   SPD S I F  + +G   ++ +   G   KR
Sbjct: 45  AGDLWTVDRKGGKATRLTAGVGIETAPVVSPDGSTIAFSGEYDGNTDVFTIPIAGGIPKR 104

Query: 341 ISQDKEASYFDPV-WSPQGDLIAF 363
           ++     S   PV W+P G  I F
Sbjct: 105 VTY--HPSIDVPVAWTPDGKQIIF 126


>gi|255010297|ref|ZP_05282423.1| putative peptidase/protease family protein [Bacteroides fragilis
           3_1_12]
          Length = 1090

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V        +LT       +  +SPDS QI F SDR G   +++M + G   +R++
Sbjct: 44  DIYKVPAGGGVATQLTTQPSYECTPIWSPDSKQIAFASDRNGNFDIFIMPATGGTAQRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
            +  AS     ++P G  I F+
Sbjct: 104 TNS-ASELPSTFTPDGKYILFS 124



 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 18/140 (12%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + + G    +++   + SY   P+WSP    IAF     
Sbjct: 31  SPDGTEIAFCY----KGDIYKVPAGGGVATQLTT--QPSYECTPIWSPDSKQIAFASDRN 84

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGS---------KL 418
             F I +M   G   + L  +S  + P T++P G+ ++FS        S         +L
Sbjct: 85  GNFDIFIMPATGGTAQRLTTNSASELPSTFTPDGKYILFSASIQDPAQSAMFPTTAMTEL 144

Query: 419 YSIDLN-GRNETLINTPAYA 437
           Y +  N GR E ++ TPA A
Sbjct: 145 YKVPSNGGRTEQVLGTPAEA 164


>gi|127512166|ref|YP_001093363.1| peptidase S41 [Shewanella loihica PV-4]
 gi|126637461|gb|ABO23104.1| peptidase S41 [Shewanella loihica PV-4]
          Length = 1104

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 125/302 (41%), Gaps = 46/302 (15%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN----QQKVAY 228
           +  R+ FVS+S  SG   +++  M  DG ++R LT   D  +   R        QQ    
Sbjct: 236 WQDRLYFVSDS--SG--NDNIWSMTLDGKDLRQLTQFSDWQVRGARLEQGRVVFQQGADI 291

Query: 229 ATYD----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
             YD        L ++L     +R    +        +   + NG + +I+ +       
Sbjct: 292 KLYDIASNQVSTLDIHLTSDFPERREHWVNKPMKYATSTSLAPNGDKVVITARS------ 345

Query: 285 YSVDLQSNATERLTNTLFINISASY-------SPDSSQIVFESDREGKEQLYVMQSNGSD 337
             V L      RL     + +   Y       SPD   +   SD  G+++++   ++GSD
Sbjct: 346 -HVALAGTDGSRLVE---LGLPGDYRVRGAVMSPDGKWVYGISDASGEQEIWRYSADGSD 401

Query: 338 Q-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP- 395
           + K+++QD +A       SP G  IA   ++G+ + + +  K G   ++L     L  P 
Sbjct: 402 EAKQLTQDGKALRMALSLSPDGRYIAHDDYNGDLWLLDL--KKGRNSKILTNGQGL-GPY 458

Query: 396 ---TWSPSGRSLIFSRKKDGDTGSK--LYSIDLNGRNETLIN------TPAYASDPQWVG 444
               WS   R +  ++ + G    +  LYS++   R E L +      +PA++ D QW+ 
Sbjct: 459 GDVVWSNDSRFIAVTKDERGQLRPQIVLYSLE-EERAEALTSDKYESFSPAFSDDGQWLY 517

Query: 445 FM 446
           F+
Sbjct: 518 FI 519



 Score = 36.6 bits (83), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D++   L      RLT+     + A+ S D  Q+ F ++ EG  ++YVM   G   KR+S
Sbjct: 61  DLWIQQLGDAQARRLTSLPAQELGAAISNDGQQLAFVANYEGASEVYVMPIQGGVAKRVS 120

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
            +         W+P G ++  T
Sbjct: 121 FENSRVRVQG-WTPDGKVLYAT 141


>gi|288928608|ref|ZP_06422454.1| MdsD protein [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329592|gb|EFC68177.1| MdsD protein [Prevotella sp. oral taxon 317 str. F0108]
          Length = 1077

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 33/62 (53%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V        +LT     +    +SPDS Q+ F S+REG   +YVMQ  G   +R++
Sbjct: 45  DIYTVPTTGGTARQLTTNAAYDTHPVWSPDSKQLAFCSNREGSMDVYVMQREGGTPRRLT 104

Query: 343 QD 344
            +
Sbjct: 105 TN 106



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 24/140 (17%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
            + SPD S + F      K  +Y + + G   ++++ +  A+Y   PVWSP    +AF  
Sbjct: 29  CAISPDGSAVAFTY----KGDIYTVPTTGGTARQLTTN--AAYDTHPVWSPDSKQLAFCS 82

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAP-------------TWSPSGRSLIFSRKKDG 412
                  + VM+++G   R L  +SN + P             +  PS +S+IF+ +   
Sbjct: 83  NREGSMDVYVMQREGGTPRRLTTNSNSETPIAFKDNNTVLYTSSIIPSAKSIIFANR--- 139

Query: 413 DTGSKLYSIDLNGRNETLIN 432
               ++Y +  NG    L +
Sbjct: 140 -MLPQVYEVGTNGSRPHLFS 158


>gi|313148096|ref|ZP_07810289.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136863|gb|EFR54223.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 1081

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V        +LT       +  +SPDS QI F SDR G   +++M + G   +R++
Sbjct: 35  DIYKVPAGGGVATQLTTQPSYECTPIWSPDSKQIAFASDRNGNFDIFIMPATGGTAQRLT 94

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
            +  AS     ++P G  I F+
Sbjct: 95  TNS-ASELPSTFTPDGKYILFS 115



 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 18/140 (12%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + + G    +++   + SY   P+WSP    IAF     
Sbjct: 22  SPDGTEIAFCY----KGDIYKVPAGGGVATQLTT--QPSYECTPIWSPDSKQIAFASDRN 75

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGS---------KL 418
             F I +M   G   + L  +S  + P T++P G+ ++FS        S         +L
Sbjct: 76  GNFDIFIMPATGGTAQRLTTNSASELPSTFTPDGKYILFSASIQDPAQSAMFPTTAMTEL 135

Query: 419 YSIDLN-GRNETLINTPAYA 437
           Y +  N GR E ++ TPA A
Sbjct: 136 YKVPSNGGRTEQVLGTPAEA 155


>gi|265752719|ref|ZP_06088288.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263235905|gb|EEZ21400.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 1074

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 20/144 (13%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D+Y   L     ++LT+ +   + A +SPD   I F    +G  ++Y++ ++G + +R
Sbjct: 41  AGDLYKAPLNGGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGNTEVYLIPTDGGEPQR 100

Query: 341 IS------QDKEASYFDP-----VWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQER 384
           ++      +D       P      W+P G  I +       F G+ ++I   K  G  E 
Sbjct: 101 LTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGKLWSIS--KNGGMPEV 158

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSR 408
           + + +      ++SP G+ L ++R
Sbjct: 159 IPLPEGGFC--SYSPDGKKLAYNR 180



 Score = 43.1 bits (100), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF 318
           + A   S +G R +++ + +    ++ +  +   T  +T T   N     +SP+  QI +
Sbjct: 315 LTAASLSPDGHRLVVTARGE----VFDIPAEKGVTRDITRTPGANEREGEWSPNGKQIAY 370

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            SDR G+ ++++    G D  +++Q+ +      +WSP    I +T
Sbjct: 371 ISDRTGETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKKILYT 416


>gi|237709192|ref|ZP_04539673.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229456888|gb|EEO62609.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 1074

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 20/144 (13%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D+Y   L     ++LT+ +   + A +SPD   I F    +G  ++Y++ ++G + +R
Sbjct: 41  AGDLYKAPLNGGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGNTEVYLIPTDGGEPQR 100

Query: 341 IS------QDKEASYFDP-----VWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQER 384
           ++      +D       P      W+P G  I +       F G+ ++I   K  G  E 
Sbjct: 101 LTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGKLWSIS--KNGGMPEV 158

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSR 408
           + + +      ++SP G+ L ++R
Sbjct: 159 IPLPEGGFC--SYSPDGKKLAYNR 180



 Score = 43.1 bits (100), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF 318
           + A   S +G R +++ + +    ++ +  +   T  +T T   N     +SP+  QI +
Sbjct: 315 LTAASLSPDGHRLVVTARGE----VFDIPAEKGVTRDITRTPGANEREGEWSPNGKQIAY 370

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            SDR G+ ++++    G D  +++Q+ +      +WSP    I +T
Sbjct: 371 ISDRTGETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKKILYT 416


>gi|150003723|ref|YP_001298467.1| putative exported protease [Bacteroides vulgatus ATCC 8482]
 gi|149932147|gb|ABR38845.1| putative exported protease [Bacteroides vulgatus ATCC 8482]
          Length = 1074

 Score = 47.8 bits (112), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 20/144 (13%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D+Y   L     ++LT+ +   + A +SPD   I F    +G  ++Y++ ++G + +R
Sbjct: 41  AGDLYKAPLNGGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGNTEVYLIPTDGGEPQR 100

Query: 341 IS------QDKEASYFDP-----VWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQER 384
           ++      +D       P      W+P G  I +       F G+ ++I   K  G  E 
Sbjct: 101 LTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGKLWSIS--KNGGMPEV 158

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSR 408
           + + +      ++SP G+ L ++R
Sbjct: 159 IPLPEGGFC--SYSPDGKKLAYNR 180



 Score = 43.1 bits (100), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 24/106 (22%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF 318
           + A   S +G R +++ + +    ++ +  +   T  +T T   N     +SP+  QI +
Sbjct: 315 LTAASLSPDGHRLVVTARGE----VFDIPAEKGVTRDITRTPGANEREGEWSPNGKQIAY 370

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            SDR G+ ++++    G D  +++Q+ +      +WSP    I +T
Sbjct: 371 ISDRTGETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKKILYT 416


>gi|311745523|ref|ZP_07719308.1| tol biopolymer transport system, periplasmic protein [Algoriphagus
           sp. PR1]
 gi|126578081|gb|EAZ82301.1| tol biopolymer transport system, periplasmic protein [Algoriphagus
           sp. PR1]
          Length = 305

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 19/166 (11%)

Query: 261 LAPRF----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           L+P +    S +GK  +    ++   DIY + +      RLT+   ++    YSPD   I
Sbjct: 135 LSPSYWHGVSPDGKDIVYCAPRNGNYDIYKMSVNGGEEIRLTSEESLDDGPEYSPDGKYI 194

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----SGEKF 371
              S R G  Q++ ++ +GSD ++++ D  +++F  + SP   +     +      G  F
Sbjct: 195 YINSYRTGMMQIWRIKPDGSDPEQMTFDNHSNWFAHI-SPNNKVATIITYLEDQKEGHPF 253

Query: 372 AIGVMKKDGSQERLLVED---------SNLQAPTWSPSGRSLIFSR 408
              V  +    E   V D           +  P+W+P G    + R
Sbjct: 254 GRQVKLRLLDLETKEVTDLTEEFYGGQGTINVPSWNPEGTKFAYVR 299


>gi|20091363|ref|NP_617438.1| hypothetical protein MA2535 [Methanosarcina acetivorans C2A]
 gi|19916497|gb|AAM05918.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
           C2A]
          Length = 560

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 2/148 (1%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-AM 282
           +K+ Y     E   +++++D R      R+G   ++     +   G R + S +  E   
Sbjct: 193 KKITYTQKAAEIPSQLWIVD-RDGSNKFRLGTSENVGTGKDWCPLGLRVIYSAKDSEDNS 251

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D++ +D       RLTNT     + S+SP+   I + SD  G   +++    G+ + R++
Sbjct: 252 DLWVIDFYGTNQVRLTNTSCNEWNPSFSPNGKWIAYVSDEGGSPDIWLRDIEGNYRSRVT 311

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            +  +    P WSP G  I F  ++ E 
Sbjct: 312 NNTGSPDSVPKWSPDGSKIVFAGYNPEN 339



 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/197 (19%), Positives = 95/197 (48%), Gaps = 13/197 (6%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP---DSSQIVF 318
           +P ++++G+  + +V+++++ ++ S  ++++ +      +     A +S    + ++++F
Sbjct: 93  SPVWTADGQYIMYTVERNDSENLESYRMKADGSSIERTGIGEGNLAGFSDINLNGTELIF 152

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMK 377
                 +  LY+          ++ D + S +   W   G  I +T+ + E    + ++ 
Sbjct: 153 TKSINSQPGLYLANLENGTVFPVADDPQISEYWGAWCRLGKKITYTQKAAEIPSQLWIVD 212

Query: 378 KDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINT-- 433
           +DGS + RL   ++      W P G  +I+S  KD +  S L+ ID  G N+  L NT  
Sbjct: 213 RDGSNKFRLGTSENVGTGKDWCPLGLRVIYS-AKDSEDNSDLWVIDFYGTNQVRLTNTSC 271

Query: 434 ----PAYASDPQWVGFM 446
               P+++ + +W+ ++
Sbjct: 272 NEWNPSFSPNGKWIAYV 288



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 27/127 (21%), Positives = 59/127 (46%), Gaps = 4/127 (3%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRIS 342
           ++ VD   +   RL  +  +     + P   ++++ + D E    L+V+   G++Q R++
Sbjct: 208 LWIVDRDGSNKFRLGTSENVGTGKDWCPLGLRVIYSAKDSEDNSDLWVIDFYGTNQVRLT 267

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPS 400
            +   + ++P +SP G  IA+    G    I +   +G+    +  ++      P WSP 
Sbjct: 268 -NTSCNEWNPSFSPNGKWIAYVSDEGGSPDIWLRDIEGNYRSRVTNNTGSPDSVPKWSPD 326

Query: 401 GRSLIFS 407
           G  ++F+
Sbjct: 327 GSKIVFA 333


>gi|8101030|gb|AAF72523.1|AF248951_4 MdsD protein [Prevotella sp. RS2]
          Length = 1073

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 70/310 (22%), Positives = 119/310 (38%), Gaps = 52/310 (16%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL------ 214
           D Y  ++ E G FN     V  + V G  K  L      G  +R+LT + D  L      
Sbjct: 224 DAYYYLSEEDGTFN-----VYRASVDGTAKQQLTHFK--GNPVRFLTRANDGTLSFGYDG 276

Query: 215 --FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             +  R     +KV+ +   D        +D  +DR  +  G     +     S NGK  
Sbjct: 277 ELYTLREGEEPRKVSVSVTADR-------IDAELDRQLRYSGASEIAV-----SPNGKEI 324

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-------- 324
              +  D    +Y   +  N T+++T+T     S  +S D   IV+ ++R G        
Sbjct: 325 AFVMHGD----VYVTSVDYNTTKQITDTPEQERSIDFSSDGRSIVYAAERNGLWQIYQST 380

Query: 325 ----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
               KE L+   +   +++ +  +K +  F P++SP G  +AF +      A+ V     
Sbjct: 381 IKNKKEDLFTYATEIEEEQLVKSNKTS--FQPMYSPDGKSVAFLEDRTRLCAVDVKSHKV 438

Query: 381 SQ----ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINT 433
            Q    + +       Q  +WSP  R L+ S    G   ++   L   D  G    + N+
Sbjct: 439 RQLMDGKYMYSYSDGDQWFSWSPDSRWLLASYIGTGGWNNRDIALVPADGKGEIRNITNS 498

Query: 434 PAYASDPQWV 443
               ++ +WV
Sbjct: 499 GYNDTNGKWV 508



 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 22/179 (12%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI++V +    T++LT     +    +SPDS  I F S REG   +++M   G    R++
Sbjct: 45  DIWTVPVAGGQTKQLTTHSAYDSYPVWSPDSKNIAFVSTREGSRDVWIMPREGGAPHRLT 104

Query: 343 Q-----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                       D +   F+    P    I F   +G    I  +  +G + +L  E + 
Sbjct: 105 TSSGSETPVAFLDNDHVLFESQVMPTAQSIFFA--NGNFPQIYSVSVNGGRPKLYSELT- 161

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL--------NGRNETLINTPAYASDPQW 442
           L+AP+ +  G  L + +K   D   K ++  +        +G+   L +      DP W
Sbjct: 162 LKAPSINSKGDVLYYDQKGSEDQWRKHHTSPITRDIWLLRDGKYRKLTSFAGEDRDPVW 220


>gi|54294320|ref|YP_126735.1| hypothetical protein lpl1385 [Legionella pneumophila str. Lens]
 gi|53754152|emb|CAH15625.1| hypothetical protein lpl1385 [Legionella pneumophila str. Lens]
          Length = 656

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 114/280 (40%), Gaps = 65/280 (23%)

Query: 210 RDQILFEPRFSPNQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIGNFR--SMILAPR 264
           R Q + EP  SP+ + VAY        ++I    +    +D    +   F   S    P+
Sbjct: 32  RIQNISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQQITFAEDSSSSLPK 91

Query: 265 FSSNGK--RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFE 319
           +S NGK    L    K+    I+   +Q N   +LT   +I+   S   +SPDS++I F 
Sbjct: 92  WSPNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLT---YIDGEVSDFTWSPDSNRIAFI 148

Query: 320 SDR---------------------------EGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           + +                           +G++ LY+++       +++      Y  P
Sbjct: 149 AQKSDPSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYL-P 207

Query: 353 VWSPQGDLIAFTKFSGE------KFAIGVMK-KDGSQERLLVE----------DSNLQAP 395
            WSP G  IAF    G+       + I +++ K G++ER L            DSNL   
Sbjct: 208 AWSPDGKYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKERQLTHFPGSDMNPDYDSNL--- 264

Query: 396 TWSPSGRSLIFSRKKDGD----TGSKLYSIDLNGRNETLI 431
           +WSP    + + R  +      + ++L  ID+N ++E +I
Sbjct: 265 SWSPDSSKIAYLRSNEHQWTYYSPNQLAIIDINTKDERII 304


>gi|73670802|ref|YP_306817.1| hypothetical protein Mbar_A3364 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397964|gb|AAZ72237.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 551

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 14/134 (10%)

Query: 308 SYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S SP+  +I+F   S      Q YV   +GS+ K      E  + +  W P G L+    
Sbjct: 254 SLSPNRKKIMFAVGSSDSYNLQTYVSNIDGSNLKGNISYNENLWANESWQPNGSLL---- 309

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              +   + +++ D + +RLL +  N     W P G+ ++F      + G+KLYSID++G
Sbjct: 310 LVNQNRNLYIVEGDENNKRLLYK-GNASESQWFPDGKKILFV-----ENGNKLYSIDIDG 363

Query: 426 RNETLINT--PAYA 437
            N + I +  P Y+
Sbjct: 364 TNLSFITSFGPTYS 377


>gi|299139377|ref|ZP_07032552.1| WD40 domain protein beta Propeller [Acidobacterium sp. MP5ACTX8]
 gi|298598646|gb|EFI54809.1| WD40 domain protein beta Propeller [Acidobacterium sp. MP5ACTX8]
          Length = 751

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 8/149 (5%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFT 364
           S  YSPD   + F S R G  ++++ ++      +++    E   F P WSP G  IAF+
Sbjct: 487 SPVYSPDGHSVAFVSTRSGWGEVWLYRTGSDAPVQLTHFHGEGLVFPPSWSPDGRSIAFS 546

Query: 365 --KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             K+      +  +     +        +   P +S  G  L FS  +DG +      +D
Sbjct: 547 FRKYGATNLMVCDLASHSIRTLTTTRKRDFN-PVYSADGAYLFFSSNEDGTSSIWRMRVD 605

Query: 423 LNGRNETL----INTPAYASDPQWVGFMD 447
             GR E L    + +   ++D +W+ F++
Sbjct: 606 GTGRPEPLFVEAVASFLPSADGRWLYFIE 634



 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 26/289 (8%)

Query: 174 NSRILFVSESVVSG----IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           + R L  +E  V+G    I+  S+   +R       +  S D    + +FSP+   +A+ 
Sbjct: 310 DGRFLLTTEQPVAGNPMRIVLISVATGERTSVTSPPIGSSGD---IDAKFSPDGSWIAFR 366

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM--DIYSV 287
                D+  V +   ++  A  R+      +    +  +G+  L   Q++E     ++ +
Sbjct: 367 RGGLGDLYMVSVKGEQVKPA-TRLTFDTDGVRGLAWIDHGRSILYGTQRNETTPYGLWRI 425

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL-YVMQSNGSDQKRISQDKE 346
                  + +T   F  I+ S SP +  +VFE  +   E +   + + G     +  DK 
Sbjct: 426 TRDGGTPQPVTPADFDAINPSISP-TGTLVFEHRQLITELIEQPLATGGGAHTPLPSDKT 484

Query: 347 ASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
            S   PV+SP G  +AF       GE +          Q      +  +  P+WSP GRS
Sbjct: 485 DS--SPVYSPDGHSVAFVSTRSGWGEVWLYRTGSDAPVQLTHFHGEGLVFPPSWSPDGRS 542

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRN-ETLINT------PAYASDPQWVGF 445
           + FS +K G T   L   DL   +  TL  T      P Y++D  ++ F
Sbjct: 543 IAFSFRKYGAT--NLMVCDLASHSIRTLTTTRKRDFNPVYSADGAYLFF 589


>gi|319957282|ref|YP_004168545.1| translocation protein tolb [Nitratifractor salsuginis DSM 16511]
 gi|319419686|gb|ADV46796.1| translocation protein TolB [Nitratifractor salsuginis DSM 16511]
          Length = 414

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 80/381 (20%), Positives = 142/381 (37%), Gaps = 70/381 (18%)

Query: 61  LGGKVSEVVSKDLQRSDVF---NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           LG K  E+ + DL+ +  +    L    SF   I NPD          L A   +    I
Sbjct: 44  LGRKSYEIFTADLKITGHYRPDGLYHDGSFNGPILNPD----------LRAMEYLLKYRI 93

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDF-NS 175
            E  + + ++ ++    D   +  +K+   S A +  + H    D+  ++     D+ N 
Sbjct: 94  SESGNGVSLDVKVLKGGDSSLVFERKYSIGSQARYPFLIHRAVTDLNAAMGFTPVDWLNR 153

Query: 176 RILFV-------SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            +LF        SE V++      +  + R G NI             P +   +Q+  Y
Sbjct: 154 YVLFARYTGRRESEVVLADYTFTYIKPIIRGGLNIF------------PVWGDAKQRTIY 201

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            T     +  +Y +D    +   RI + + M++    S +GKR L+++      DIY  +
Sbjct: 202 YTDYSGKLPTLYRLDLTTGQR-TRILDSQGMLVCSDVSRDGKRLLLTMAPSGQPDIYEYN 260

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-------------QLYVMQSNG 335
           + +    +LT    I++   Y+     +VF S+R G               QL    SN 
Sbjct: 261 VATGEKRQLTTYSGIDVGGKYADKERSMVFVSNRLGYANIFKKPLAGGPITQLVFHGSNN 320

Query: 336 S-----DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                 D K +   KE S F                 G+ F + +   DG   R L    
Sbjct: 321 DSCDAFDNKVVYSSKEKSSF-----------------GKAFNLYLTTTDGDYTRPLTSGG 363

Query: 391 NLQAPTWSPSGRSLIFSRKKD 411
             Q P +S  G ++++ ++ +
Sbjct: 364 INQFPRFSNDGNTVLYIKRSE 384


>gi|149276299|ref|ZP_01882443.1| hypothetical protein PBAL39_01227 [Pedobacter sp. BAL39]
 gi|149232819|gb|EDM38194.1| hypothetical protein PBAL39_01227 [Pedobacter sp. BAL39]
          Length = 1046

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 13/169 (7%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATER-----LTNTL-----FI 303
           N  +M +AP  S +GK      +KD   +D++  D ++    R     ++N+      F+
Sbjct: 281 NAGNMNVAPAISPDGKFLAFLSEKDLFGIDLFLADAKTGKILRKLSSQISNSHIDDFNFL 340

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             + ++SPDS Q  F    +G+ QL V+  ++G    R +    A + +  WS  GD IA
Sbjct: 341 ESAGAWSPDSKQFAFSIFSKGRNQLMVIDVASGKVVLRAAMGDVAQFGNLSWSTNGDDIA 400

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKK 410
           F+     +  I        Q   + +D  +  AP++SP G  LIFS  +
Sbjct: 401 FSGMVEGQSDIFSYNLKTKQVTQITDDIYSDYAPSYSPDGSKLIFSSDR 449


>gi|301058310|ref|ZP_07199343.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300447546|gb|EFK11278.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 2881

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 14/182 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIY--SVDLQSNATERLTNT 300
           +R    PK+       I AP  S + ++   +   D+A  DIY  ++D   +   RLT  
Sbjct: 112 SRTGALPKKRLQDLGRISAPSLSQHAEKMAFAATNDDAKGDIYLLTMDTPESTPWRLTGR 171

Query: 301 LFINISASYSPDSSQIVFESDREGKE--QLYVM----QSNGSDQKRISQDKEASYFDPVW 354
              + + + SPD  ++ F+    G+   QL VM    Q++  D   +   +E ++  P  
Sbjct: 172 DSADGAPALSPDGRRVYFQRLLPGEALPQLSVMEIDSQTDRQDTPEVKVLREGAF--PAV 229

Query: 355 SPQGDLIAFTKFSGEKFA-IGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP GD +AF  F+ +    I V+  K G  + +    +    P WS  G+S+ FSR  D 
Sbjct: 230 SPGGDRLAFVSFAEDPGGDIHVLDLKTGKAKAVTTGPAQDLYPAWSRDGKSVYFSR-IDA 288

Query: 413 DT 414
           DT
Sbjct: 289 DT 290


>gi|83814217|ref|YP_446141.1| acyl-peptide hydrolase, putative [Salinibacter ruber DSM 13855]
 gi|294508064|ref|YP_003572122.1| peptidase [Salinibacter ruber M8]
 gi|83755611|gb|ABC43724.1| acyl-peptide hydrolase, putative [Salinibacter ruber DSM 13855]
 gi|294344392|emb|CBH25170.1| putative peptidase [Salinibacter ruber M8]
          Length = 690

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 13/139 (9%)

Query: 262 APRFSSNGKRALISVQK--DEAMD-----IYSVDLQSNATERLTNTLFINISASYSPDSS 314
           AP ++ +G+  LIS  +  D  +D     +Y+VD+ S A   LT     +   + SPD S
Sbjct: 228 APTWTPDGETLLISANRHADRRLDPLNTEVYAVDVASGAVTALTTRQGPDGDVALSPDGS 287

Query: 315 QIVFES--DREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            I +    DRE   Q   LYVM  +G++ + +++  +    +P ++  G+ I F      
Sbjct: 288 TIAYTGFDDREQGYQVTKLYVMDRDGTNARLLTEGFDRDVQNPTFTADGEHIVFRYVDEG 347

Query: 370 KFAIGVMKKDGSQERLLVE 388
              IG +  DG + R++ E
Sbjct: 348 STKIGRVALDGGR-RVVAE 365



 Score = 44.3 bits (103), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 115/287 (40%), Gaps = 58/287 (20%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL--MDT------ 244
           L  ++ DG+  R +T + +    +PR+SP+  +VAY    + D   V++  MDT      
Sbjct: 76  LWAVNADGSGHRPIT-APETNASQPRWSPSGDRVAYVASTEGDGAEVFVRWMDTGQTARI 134

Query: 245 -RIDRAPKRIG--------NFRSMILA-----PRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            +++ +P  +          F   + A      R  S  + A  + + D     Y     
Sbjct: 135 TQLEESPSGLSWGPEGDRLAFSMFVPAEPEPFARMPSPPEGADWAERPDVIDQTYYRSDG 194

Query: 291 SNATERLTNTLFINISAS-------------------YSPDSSQIVFESDREGKEQLYVM 331
              TER    LF+ +SAS                   ++PD   ++  ++R    +L  +
Sbjct: 195 GGYTERGHTQLFV-VSASGGTPRQITTGPYDHGGAPTWTPDGETLLISANRHADRRLDPL 253

Query: 332 QSN------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDG 380
            +        S        ++    D   SP G  IA+T F   +       + VM +DG
Sbjct: 254 NTEVYAVDVASGAVTALTTRQGPDGDVALSPDGSTIAYTGFDDREQGYQVTKLYVMDRDG 313

Query: 381 SQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +  RLL E  D ++Q PT++  G  ++F    +G T  K+  + L+G
Sbjct: 314 TNARLLTEGFDRDVQNPTFTADGEHIVFRYVDEGST--KIGRVALDG 358


>gi|162449890|ref|YP_001612257.1| hypothetical protein sce1619 [Sorangium cellulosum 'So ce 56']
 gi|161160472|emb|CAN91777.1| hypothetical protein sce1619 [Sorangium cellulosum 'So ce 56']
          Length = 408

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 30/161 (18%)

Query: 304 NISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDK---EASYF---DPVWS 355
           N  A +SPD  ++VF+S R+G   +Q Y++     + +R+S  +      YF    P  S
Sbjct: 92  NAEAYWSPDGRKLVFQSTRDGNTCDQQYILDLESGEVRRVSNGQGKTTCGYFLFPAPATS 151

Query: 356 PQGD-LIAFTKFSGE-----------------KFAIGVMKKDGSQERLLVEDSNLQA-PT 396
            Q   L A T  +GE                 +F I     DGS+ R L++     A  T
Sbjct: 152 AQARVLFASTHAAGEACPPKPDHSQGYVWPLDEFDIYTANADGSELRPLIQGKGYDAEAT 211

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAY 436
            +  G  L+F+  +DGD   +LY+  L+G + + + +TP Y
Sbjct: 212 VAFDGSRLVFTSTRDGDI--ELYTAKLDGSDVKRITSTPGY 250



 Score = 40.4 bits (93), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 60/145 (41%), Gaps = 19/145 (13%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIY+ +   +    L      +  A+ + D S++VF S R+G  +LY  + +GSD KRI
Sbjct: 185 FDIYTANADGSELRPLIQGKGYDAEATVAFDGSRLVFTSTRDGDIELYTAKLDGSDVKRI 244

Query: 342 SQDK---EASYFDP-----VW---SPQGD-------LIAFTKFSGEKFAIGVMKKDGSQE 383
           +        ++F P     VW    P G        L+A          I V   DG   
Sbjct: 245 TSTPGYDGGAFFSPDATKLVWRASRPTGPALDDYRALLAKGLVRPSALEIFVAGADGQNP 304

Query: 384 RLLVEDSNLQ-APTWSPSGRSLIFS 407
           R +  +     AP + P  R ++F+
Sbjct: 305 RPVTRNGRANFAPYFLPDSRRILFA 329



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/180 (20%), Positives = 79/180 (43%), Gaps = 36/180 (20%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G R + +  +D  +++Y+  L  +  +R+T+T   +  A +SPD++++V+ + R     
Sbjct: 215 DGSRLVFTSTRDGDIELYTAKLDGSDVKRITSTPGYDGGAFFSPDATKLVWRASRPTGPA 274

Query: 328 L-------------------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFS 367
           L                   +V  ++G + + ++++  A+ F P + P    I F + FS
Sbjct: 275 LDDYRALLAKGLVRPSALEIFVAGADGQNPRPVTRNGRAN-FAPYFLPDSRRILFASDFS 333

Query: 368 GEKFAIGVMK-------------KDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             + A G+                DG    ER+   +     P +SP+G  ++F+  + G
Sbjct: 334 TPQGARGMPNFDLYLVDSDAPPAADGVPPVERVTFYEGFDSFPMFSPTGEHVVFASNRHG 393


>gi|312111892|ref|YP_003990208.1| WD40-like beta Propeller containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|311216993|gb|ADP75597.1| WD40-like beta Propeller containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 669

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           A E L    F++    +SPD  +++F     + +RE +  L+++       K+ +  K  
Sbjct: 14  AAEDLFRIHFVS-DPQFSPDGKKVIFVQKTIDHEREYRSHLFLLSLADGSVKQWTFGKSK 72

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
             F P WSP G  IAF      K  I  +  DG + R L    N ++   WSP+GR LI
Sbjct: 73  DTF-PRWSPDGKTIAFLSNRSGKPQIWRLPADGGEARQLTFLKNGVRQLCWSPNGRFLI 130



 Score = 43.1 bits (100), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 7/114 (6%)

Query: 263 PRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           P+FS +GK+ +     I  +++    ++ + L   + ++ T     +    +SPD   I 
Sbjct: 27  PQFSPDGKKVIFVQKTIDHEREYRSHLFLLSLADGSVKQWTFGKSKDTFPRWSPDGKTIA 86

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEK 370
           F S+R GK Q++ + ++G + ++++  K        WSP G  LIA T    E+
Sbjct: 87  FLSNRSGKPQIWRLPADGGEARQLTFLKNGVR-QLCWSPNGRFLIALTSLGKEE 139


>gi|148655768|ref|YP_001275973.1| WD40 domain-containing protein [Roseiflexus sp. RS-1]
 gi|148567878|gb|ABQ90023.1| WD40 domain protein beta Propeller [Roseiflexus sp. RS-1]
          Length = 347

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 6/147 (4%)

Query: 282 MDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVF--ESDREGKEQLYVMQSNGS 336
           + ++++  Q     RL    +T  +    +++PD S IVF  E    G     +     +
Sbjct: 171 LALFTIPAQPGGVRRLIYADDTGHVG-RVTHTPDGSAIVFTLEPAYAGGSSQIMRYDRTT 229

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                  D  +  +DP +SP G  +AF    G++  I  +   G     L      +AP 
Sbjct: 230 GTVAPQPDVPSGSYDPAFSPDGRWLAFAGRDGDRTDIFAVPAAGGTIVRLTGLGTARAPA 289

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +SP GR + F     G+TG  L+  D+
Sbjct: 290 FSPDGRRIAFLAVAPGETGFDLWVADI 316


>gi|189464174|ref|ZP_03012959.1| hypothetical protein BACINT_00511 [Bacteroides intestinalis DSM
           17393]
 gi|189437964|gb|EDV06949.1| hypothetical protein BACINT_00511 [Bacteroides intestinalis DSM
           17393]
          Length = 1082

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 21/160 (13%)

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RF ++NG   + S     A D+Y V +     +RLT+ +   +   +SPD   I F    
Sbjct: 29  RFPATNGNEIVFSY----AGDLYRVPVTGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQY 84

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFTKFSGEKF 371
           +G  ++Y + + G + +R+      S+D       P      W+P G  I +     + F
Sbjct: 85  DGNTEVYTIPATGGEPQRLTYTATNSRDDLGDRMGPNNIVMTWTPDGKQIIYRNRISDGF 144

Query: 372 A---IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           A     V ++ G  E + + +      ++SP G+ L ++R
Sbjct: 145 AGKLYSVNQEGGMPEIIPLPEGGFC--SYSPDGKRLAYNR 182



 Score = 41.2 bits (95), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 41/203 (20%), Positives = 95/203 (46%), Gaps = 18/203 (8%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSP 311
           I N    + A   S +G+R +++ + +    ++++      T+ +T T   +  +A +S 
Sbjct: 310 IKNGAKYLTAASASPDGERVVVTARGE----VFNLPSTKGVTKNITRTPGAHERNAQWSS 365

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I + SD  G+ +LY+  +   +  +++++ +       WSP    I +T     + 
Sbjct: 366 DGKYIAYISDATGETELYLQDAVEGNPVQLTKNNDTYIRSFEWSPDSKKIVYTD---RQN 422

Query: 372 AIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            I ++     Q  +L++D     Q  T+SP  + L ++R  D +  + +Y  D+ G+ E 
Sbjct: 423 RINLLDVASRQVTMLLQDPMGEPQDVTFSPDSKWLTYTRDADNEI-TVVYVYDIAGKKEY 481

Query: 430 LI-------NTPAYASDPQWVGF 445
            +       ++P +++D +++ F
Sbjct: 482 PVTDKWYNSSSPVFSTDGKYLIF 504


>gi|295401287|ref|ZP_06811259.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|294976694|gb|EFG52300.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus thermoglucosidasius C56-YS93]
          Length = 675

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 8/119 (6%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           A E L    F++    +SPD  +++F     + +RE +  L+++       K+ +  K  
Sbjct: 20  AAEDLFRIHFVS-DPQFSPDGKKVIFVQKTIDHEREYRSHLFLLSLADGSVKQWTFGKSK 78

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
             F P WSP G  IAF      K  I  +  DG + R L    N ++   WSP+GR LI
Sbjct: 79  DTF-PRWSPDGKTIAFLSNRSGKPQIWRLPADGGEARQLTFLKNGVRQLCWSPNGRFLI 136



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 56/114 (49%), Gaps = 7/114 (6%)

Query: 263 PRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           P+FS +GK+ +     I  +++    ++ + L   + ++ T     +    +SPD   I 
Sbjct: 33  PQFSPDGKKVIFVQKTIDHEREYRSHLFLLSLADGSVKQWTFGKSKDTFPRWSPDGKTIA 92

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEK 370
           F S+R GK Q++ + ++G + ++++  K        WSP G  LIA T    E+
Sbjct: 93  FLSNRSGKPQIWRLPADGGEARQLTFLKNGVR-QLCWSPNGRFLIALTSLGKEE 145


>gi|226226567|ref|YP_002760673.1| putative S9C family peptidase [Gemmatimonas aurantiaca T-27]
 gi|226089758|dbj|BAH38203.1| putative S9C family peptidase [Gemmatimonas aurantiaca T-27]
          Length = 685

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 57/247 (23%), Positives = 99/247 (40%), Gaps = 61/247 (24%)

Query: 216 EPRFSPNQQKVAY------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           +P +SP+ + VA+       T DD    +++L+      A +++ + R  +    +S +G
Sbjct: 95  QPTWSPDGKTVAFVASRGAGTGDDAPRAQIWLLPADGGEA-RQLSSLRDGVSGYVWSPDG 153

Query: 270 KRALISVQKDEAMD----------------------IYSVDLQSNATERLTNTLF-INIS 306
            +  ++ Q   + +                      I+ VD+ + A  R+T   F +N  
Sbjct: 154 SKIAVTSQDSISREDDAKRRRRDDAQVYEGPSRLSHIWVVDVATGAATRITTGNFTVNGV 213

Query: 307 ASYSPDSSQIVFESD-----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            S+SPD +++ F++      R+ +   YV+        RI+ + E     P +SP G L+
Sbjct: 214 PSWSPDGARLAFQAGPTTLIRDERHDAYVVDVATKQLDRITSNGEVE-TTPQFSPDGKLL 272

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE---------------------DSNLQAPTWSPS 400
           AFT    E FA     KDG   R L                       D +  A  WSP 
Sbjct: 273 AFTVVPHE-FA---AHKDGIPPRTLRNGRVTTFDLATRTSTNHARPDFDVSAGALRWSPD 328

Query: 401 GRSLIFS 407
           G+ L F+
Sbjct: 329 GKELWFT 335


>gi|121996956|ref|YP_001001743.1| peptidase S41 [Halorhodospira halophila SL1]
 gi|121588361|gb|ABM60941.1| peptidase S41 [Halorhodospira halophila SL1]
          Length = 1193

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 60/124 (48%), Gaps = 14/124 (11%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK- 365
           A  SPD ++I F   R G+  L V   +G  ++ + +  +A+  D  WSP G  IA+T+ 
Sbjct: 533 ARPSPDGTRIAF---RRGRGDLVVQDLDGGGERTLVEGWDAT-IDWRWSPDGRHIAYTQN 588

Query: 366 ---FSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              FS   F   ++  DGS E + +     N   P WS  GR L F   + GD+   LY 
Sbjct: 589 DLDFSANVF---IVPADGSAEPVNITRHPRNDLNPHWSADGRVLTFISNRSGDS-YDLYR 644

Query: 421 IDLN 424
           + L+
Sbjct: 645 VYLD 648



 Score = 40.4 bits (93), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 25/159 (15%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G++ + S       D++ V  +     RLT     ++ +++S D   +VF S R
Sbjct: 40  PSISPDGEKLVFSW----GGDLWRVPAEGGTATRLTGHRLDDLHSAWSGDGDTLVFSSLR 95

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFD-----PVWSPQGDLIAFTKFSGEKFA----- 372
           +G   L+ M+ +G+  +++      +Y D     P +    D      FS +  A     
Sbjct: 96  DGYLNLWRMRPDGTGLRQV------TYGDRFLRHPGFGVGRDGEPLVTFSAQLEADVYRD 149

Query: 373 ---IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
               GV    G  +RL   D+    P+ SP GR + F+R
Sbjct: 150 QRPYGVAPGGGEPQRL--HDAFGSEPSTSPDGRYVAFTR 186


>gi|148508342|gb|ABQ76125.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [uncultured
           haloarchaeon]
          Length = 627

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 5/168 (2%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDR 322
           S +G+  ++   +D  M++Y   L+S+ TE++T+      +A  SP+  ++ +   E D 
Sbjct: 121 SEDGQTLIVGSTRDGQMNLYRHHLESSQTEKITSYNRATANAILSPECDRLAYSTNERDN 180

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                +YV  ++GS+ + +   +  +   PV W P    +  T  + E   IGV      
Sbjct: 181 FNNRDVYVAAADGSNPRNLDIGEIGAESTPVDWGPDNQQLLITDNTAEFDRIGVYDLKTH 240

Query: 382 QERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           + + L +D   + A  ++P G  +I  R ++  +   +Y I+ N   E
Sbjct: 241 ELKWLGDDQREESAVAFTPDGNRVIGIRVREAVSVPVVYDIESNEATE 288


>gi|116619729|ref|YP_821885.1| WD40 domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222891|gb|ABJ81600.1| WD40 domain protein beta Propeller [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 335

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 5/96 (5%)

Query: 237 LRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEA----MDIYSVDLQS 291
           +++ LM +  D    R I NF     AP F+ +GK+ L +  K E      ++Y +++  
Sbjct: 228 MKMELMVSNADGTSARQITNFGCASFAPTFAPDGKKILFASNKAECDSRKFELYLINVDG 287

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
              E++TN         +SPD   +VF +D++ KE+
Sbjct: 288 TGLEQVTNFGGFTSFPEFSPDGKTLVFCTDKDAKER 323



 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 86/185 (46%), Gaps = 23/185 (12%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             DI+  +      +RLTNT   +  A+ +  ++ IV+ S   G   L+ M+ +GS +K+
Sbjct: 121 GYDIFEANDIGEIEKRLTNTPGYDAEATVNWKTNNIVYTSVASGDLDLWTMKPDGSAKKQ 180

Query: 341 ISQDK---EASYFDP-----VWS---PQGD--------LIAFTKFSGEKFAIGVMKKDGS 381
           I+++      + F       VW    P+ D        L+A    +  K  + V   DG+
Sbjct: 181 ITKNPGYDGGAVFSRDGKQLVWRAGYPKNDADMKRYKELLAENLTAPMKMELMVSNADGT 240

Query: 382 QERLLVEDSNLQ-APTWSPSGRSLIF-SRKKDGDTGS-KLYSIDLNGRN-ETLINTPAYA 437
             R +        APT++P G+ ++F S K + D+   +LY I+++G   E + N   + 
Sbjct: 241 SARQITNFGCASFAPTFAPDGKKILFASNKAECDSRKFELYLINVDGTGLEQVTNFGGFT 300

Query: 438 SDPQW 442
           S P++
Sbjct: 301 SFPEF 305



 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 34/155 (21%), Positives = 67/155 (43%), Gaps = 26/155 (16%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG----------------- 324
           +D++++    +A +++T     +  A +S D  Q+V+ +                     
Sbjct: 166 LDLWTMKPDGSAKKQITKNPGYDGGAVFSRDGKQLVWRAGYPKNDADMKRYKELLAENLT 225

Query: 325 ---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----KFAIGVMK 377
              K +L V  ++G+  ++I+    AS F P ++P G  I F     E    KF + ++ 
Sbjct: 226 APMKMELMVSNADGTSARQITNFGCAS-FAPTFAPDGKKILFASNKAECDSRKFELYLIN 284

Query: 378 KDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKD 411
            DG+    +       + P +SP G++L+F   KD
Sbjct: 285 VDGTGLEQVTNFGGFTSFPEFSPDGKTLVFCTDKD 319


>gi|255531702|ref|YP_003092074.1| amidohydrolase [Pedobacter heparinus DSM 2366]
 gi|255344686|gb|ACU04012.1| amidohydrolase [Pedobacter heparinus DSM 2366]
          Length = 1052

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 19/140 (13%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           SA  SP+  Q+VF +      ++Y+M   G  + RI   +  S F P WS  G  I F  
Sbjct: 327 SACASPEGRQLVFSA----LNRIYIMDLPGG-KPRILVKQPFSQFQPAWSADGQWITFVS 381

Query: 366 FSGEKFA-IGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRK------------KD 411
           +S  +F  +  + K+G     +   + +   P WSP G+S+  ++             +D
Sbjct: 382 WSDAEFGQVWKVDKNGDSLTQISHKAGVYHYPNWSPDGKSIAVTKGRKVWQGKPMLGDRD 441

Query: 412 GDTGSKLYSIDLNGRNETLI 431
           G    +L +++L   N+ +I
Sbjct: 442 GPGIGQLITLELQNGNQKVI 461


>gi|239617551|ref|YP_002940873.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kosmotoga olearia TBF 19.5.1]
 gi|239506382|gb|ACR79869.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kosmotoga olearia TBF 19.5.1]
          Length = 605

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 73/154 (47%), Gaps = 6/154 (3%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           I+    SS+G++ L S  +    + + +DL++    +LT++        Y P+ +  +FE
Sbjct: 19  IIGTALSSDGRKILFSSDESGIFNAHEIDLETGKASKLTDSQDSVFIVGYLPEGNGFLFE 78

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGV 375
            D  G E   +Y+  ++G ++K ++ D++A      WS  G    F   K   + F I  
Sbjct: 79  KDNGGNEISHIYLKDADG-NEKDLTPDEKAKAMFHSWSDDGKGFYFLSNKRDPKYFDIYY 137

Query: 376 MKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSR 408
           M     +  L++E++    P   SP+GR +  S+
Sbjct: 138 MDIKSLEADLILENNEGFNPGPVSPNGRFIALSK 171


>gi|254525121|ref|ZP_05137176.1| putative regulatory protein [Stenotrophomonas sp. SKA14]
 gi|219722712|gb|EED41237.1| putative regulatory protein [Stenotrophomonas sp. SKA14]
          Length = 775

 Score = 47.0 bits (110), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 10/154 (6%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           APR+S +GK  L+ V+  +  D++ +       E+LTN        ++  D   IVF   
Sbjct: 369 APRYSPDGK-WLVFVRNPQMGDLWRMPASGGVPEQLTNEAAEQRGWAWVDDGRTIVFGRR 427

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVW---SPQGDLIAFTKFSGEKFAIGVMKK 378
            + + +LY +      ++R  +D  A   D  W   S  G ++AF     +     V   
Sbjct: 428 VDSEVRLYYLDV----ERRTLRD--AGLDDAQWPAVSRHGGVLAFVHRRAQFGVFKVPTD 481

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            GS +RL         P  +P GR L+F+  + G
Sbjct: 482 GGSAQRLFASSGRDGQPMAAPDGRQLVFTSDRSG 515



 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 68/167 (40%), Gaps = 17/167 (10%)

Query: 297 LTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQS-NGSDQKRISQDKEASYFDP 352
           +T T       + SPD SQ+ +E    D +G   + V  S N   ++ ++    AS   P
Sbjct: 216 ITATSGFETYPTLSPDGSQVAYEGANEDGKGGGAIKVQTSGNAPARQLLAPPVGASDRFP 275

Query: 353 VWSPQGDLIAFTKFSGE---KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            WSP G  IAF +FS E   +  I        ++    + + L +  W+P GR L+F   
Sbjct: 276 SWSPDGREIAFARFSAEGGCQVLIASATGGALRQATRCDGTELLSFDWTPDGRGLVFGSM 335

Query: 410 KDGDTGSKLYSIDLNGRNETLIN----------TPAYASDPQWVGFM 446
                   +  +DL       ++           P Y+ D +W+ F+
Sbjct: 336 VGRYAHRGIRVLDLASGQWNAVDYSVDADDFDYAPRYSPDGKWLVFV 382


>gi|116624109|ref|YP_826265.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227271|gb|ABJ85980.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 880

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 48/200 (24%), Positives = 90/200 (45%), Gaps = 27/200 (13%)

Query: 216 EPRFSPNQQKVAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG---KR 271
           EP  SP+ +++A+ +  +D D++ + L  T+           ++++   R   +G     
Sbjct: 584 EPAVSPDGRRIAFTSGAEDTDLIEIALDGTKT----------KTLLATSRPEYSGAWSPS 633

Query: 272 ALISVQKDEAMDIYSVDLQSNAT------ERLTNTLFINIS-ASYSPDSSQIVFESDREG 324
            L  V    A D  ++ ++S A       E  +   ++++S   YSPD  +I +   R G
Sbjct: 634 GLQYVYVTSAPDGPAIWMRSLAEGWARPFEEGSAEGYLDLSQPRYSPDGQRIAYV--RTG 691

Query: 325 -KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            +  +YV  + G     + ++  A    P WSP G+ IA+T+F G+ + I      G  +
Sbjct: 692 ARHAVYVSSTAGGPAVPLERES-ADQHTPAWSPDGNWIAYTRFVGQNWEITKAPSGGGGQ 750

Query: 384 --RLLVEDSNLQAPTWSPSG 401
             RL +   +     WSP+G
Sbjct: 751 PVRLGIGGDSSGWMEWSPTG 770



 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 10/152 (6%)

Query: 263 PRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           P  S +G+R A  S  +D   D+  + L    T+ L  T     S ++SP   Q V+ + 
Sbjct: 585 PAVSPDGRRIAFTSGAED--TDLIEIALDGTKTKTLLATSRPEYSGAWSPSGLQYVYVTS 642

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEA-SYFD---PVWSPQGDLIAFTKFSGEKFAIGVMK 377
                 ++ M+S      R  ++  A  Y D   P +SP G  IA+ + +G + A+ V  
Sbjct: 643 APDGPAIW-MRSLAEGWARPFEEGSAEGYLDLSQPRYSPDGQRIAYVR-TGARHAVYVSS 700

Query: 378 KDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSR 408
             G     L  E ++   P WSP G  + ++R
Sbjct: 701 TAGGPAVPLERESADQHTPAWSPDGNWIAYTR 732



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 47/204 (23%), Positives = 85/204 (41%), Gaps = 27/204 (13%)

Query: 258 SMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           +M+ AP    +G+R+++S++        +Y++D  + A + LT         + SPD  +
Sbjct: 538 TMVWAP----DGRRSILSMEPAPGSWAHLYAIDTVTAALQPLTGGTGEEREPAVSPDGRR 593

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           I F S  E  + L  +  +G+  K +       Y    WSP G    +   + +  AI +
Sbjct: 594 IAFTSGAEDTD-LIEIALDGTKTKTLLATSRPEYSG-AWSPSGLQYVYVTSAPDGPAIWM 651

Query: 376 MKKDGSQERLLVEDS-----NLQAPTWSPSGRSLIFSRKKDGDTGSK--LYSIDLNG--- 425
                   R   E S     +L  P +SP G+ + + R     TG++  +Y     G   
Sbjct: 652 RSLAEGWARPFEEGSAEGYLDLSQPRYSPDGQRIAYVR-----TGARHAVYVSSTAGGPA 706

Query: 426 ----RNETLINTPAYASDPQWVGF 445
               R     +TPA++ D  W+ +
Sbjct: 707 VPLERESADQHTPAWSPDGNWIAY 730


>gi|149370551|ref|ZP_01890240.1| WD40-like repeat/amidohydrolase domain protein [unidentified
           eubacterium SCB49]
 gi|149356102|gb|EDM44659.1| WD40-like repeat/amidohydrolase domain protein [unidentified
           eubacterium SCB49]
          Length = 1089

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 21/179 (11%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY++ +     + +   +   +   +SPD   I F SD  G + ++ M ++G +  +++
Sbjct: 69  DIYTMPITGGKAKAIRTGIAFEVQPRFSPDGKHISFTSDAGGGDNIWTMDASGDNATQVT 128

Query: 343 QDKEASYFDPVWSPQGD-LIAFTKF-SGEKFAIGVM----KKDGSQERLLVEDSNLQ--- 393
           ++      + VW   G+ LIA   F SG     G +    K  GS  +L    ++ Q   
Sbjct: 129 KENFRLLNNAVWMADGNYLIARKHFSSGRSLGAGELWQYHKTGGSGIQLTARKNDQQDVG 188

Query: 394 APTWSPSGRSLIFSR--------KKDGDTGSKLYSI---DL-NGRNETLINTPAYASDP 440
            P  S  G+ + +S         + + D  S++Y I   DL  G+ ET+   P  A+ P
Sbjct: 189 EPFVSADGKYVYYSEDMYPGGFFQYNKDPNSQIYVIKRYDLETGKIETITGGPGGAARP 247



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 96/231 (41%), Gaps = 33/231 (14%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D+ +    D+ IDR        R  I  P    +GK  + +        IY  +L +   
Sbjct: 341 DLAQTVKTDSPIDRTTFTSKVIRDAITTP----DGKTLVFNALGK----IYKKELPNGTP 392

Query: 295 ERLTNTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            RLT         S +P+ + IV+ +  D E K  +Y +  NG   ++++++K   Y  P
Sbjct: 393 TRLTTATDFEYEPSLAPNGTDIVYVTWNDIE-KGAIYKLNLNGGTPQKLTKEK-GIYRTP 450

Query: 353 VWSPQGDLIAFTKFSG---------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
            +S  G  I F K  G         +   I +M  DG+ E  L  ++N + P ++    S
Sbjct: 451 SYSNDGKHIVFKKEKGNSDQGNSFTKNAGIYIMTADGTSEIKL--NANGEYPRFNED-DS 507

Query: 404 LIFSRKKD---GDTGSKLYSIDLNGRNETLINTPAYAS------DPQWVGF 445
            IF +      G+   KL S++L G +E       YA+      D +WV F
Sbjct: 508 RIFLQTGGTYFGNLTKKLISVNLKGNDEREHLISKYANRIVPSPDNKWVAF 558



 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 74/175 (42%), Gaps = 24/175 (13%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISAS 308
           P R+         P  + NG   +     D E   IY ++L     ++LT    I  + S
Sbjct: 392 PTRLTTATDFEYEPSLAPNGTDIVYVTWNDIEKGAIYKLNLNGGTPQKLTKEKGIYRTPS 451

Query: 309 YSPDSSQIVFESDREGKEQ---------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           YS D   IVF+ ++   +Q         +Y+M ++G+ + +++ + E   F+     + D
Sbjct: 452 YSNDGKHIVFKKEKGNSDQGNSFTKNAGIYIMTADGTSEIKLNANGEYPRFN-----EDD 506

Query: 360 LIAFTKFSGEKFA------IGV-MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
              F +  G  F       I V +K +  +E L+ + +N   P  SP  + + FS
Sbjct: 507 SRIFLQTGGTYFGNLTKKLISVNLKGNDEREHLISKYANRIVP--SPDNKWVAFS 559


>gi|159900681|ref|YP_001546928.1| hypothetical protein Haur_4168 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159893720|gb|ABX06800.1| hypothetical protein Haur_4168 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 463

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 2/81 (2%)

Query: 241 LMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           L  T  D+AP  +G   ++I  AP +S +GK  +++   ++ +D+Y+VD+ +   +RLTN
Sbjct: 140 LPTTASDQAPA-LGRKSALIDQAPVWSHDGKTIMLASAHEQQVDLYAVDVATGTAQRLTN 198

Query: 300 TLFINISASYSPDSSQIVFES 320
           T  + ++   S D S + F S
Sbjct: 199 TPDLEVNLELSADGSHLAFAS 219


>gi|157960820|ref|YP_001500854.1| winged helix family two component response transcriptional
           regulator [Shewanella pealeana ATCC 700345]
 gi|157845820|gb|ABV86319.1| putative two component transcriptional regulator, winged helix
           family [Shewanella pealeana ATCC 700345]
          Length = 715

 Score = 47.0 bits (110), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 50/219 (22%), Positives = 95/219 (43%), Gaps = 15/219 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTR-IDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P  SP+ + + Y +        +YL D +     PKR+ + +S  +   +S +G      
Sbjct: 190 PAISPDGRWLVYGSRGSNRYASLYLKDLQNPAETPKRLTSTKSAEIRAVWSPDGSALYYG 249

Query: 276 VQ--KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--ESDREGKEQLYVM 331
            +   ++   +  ++L SN   +L      + +   +PD S++V+  ++D      LY +
Sbjct: 250 SEYRSEDKCYLTKLNLDSNEALKLGECYTYSSAIDIAPDGSRLVYIWDADEGFGSGLYEL 309

Query: 332 QSNGSDQ--KRISQDKEASYFD--PVWSPQGDLIA----FTKFSGEKFAIGVMKKDGSQE 383
             N  +Q  KR+S  ++ SY D    +SP G  +A    F   S + F +    + G ++
Sbjct: 310 TLNRDEQPPKRLSCTEDCSYRDRDAAFSPDGSWLAVARRFGNISEDIFLLHT--ETGEEQ 367

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           RL     +++  +W      LIFS +  G     +  ID
Sbjct: 368 RLTFGLEDIRGLSWHQDSERLIFSTENSGVRNGYIVGID 406


>gi|329955036|ref|ZP_08296017.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           clarus YIT 12056]
 gi|328526326|gb|EGF53341.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           clarus YIT 12056]
          Length = 736

 Score = 46.6 bits (109), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 8/108 (7%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + SPD  QI +        + +   +L+VM ++GS+ K+I++D       P W   G 
Sbjct: 56  SVAVSPDEKQIAYSVAYYSVPENKSNNELFVMNADGSNNKQITRDNWQES-QPAWIKDGK 114

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
            IAF         +  M  DG++ + L + D +++   +SP G+ L+F
Sbjct: 115 KIAFLCNESGSSQVWEMNPDGTERKQLTQYDGDIEGFAFSPDGKKLLF 162


>gi|261419180|ref|YP_003252862.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. Y412MC61]
 gi|319765997|ref|YP_004131498.1| WD40-like beta Propeller containing protein [Geobacillus sp.
           Y412MC52]
 gi|261375637|gb|ACX78380.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. Y412MC61]
 gi|317110863|gb|ADU93355.1| WD40-like beta Propeller containing protein [Geobacillus sp.
           Y412MC52]
          Length = 673

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFS 367
           +SPD   I F SDR G+ QL+++ +NG + ++++  K     D VWSP G  LIA T   
Sbjct: 77  FSPDGQTIAFLSDRSGRTQLWLLPANGGEARQLTFFKNGVR-DYVWSPDGTFLIALTTLG 135

Query: 368 GEK 370
            E+
Sbjct: 136 DEE 138


>gi|220904131|ref|YP_002479443.1| WD40 domain-containing protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868430|gb|ACL48765.1| WD40 domain protein beta Propeller [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 439

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 68/353 (19%), Positives = 157/353 (44%), Gaps = 27/353 (7%)

Query: 100 FQDWNSLGAQVLVTGRVIKEGKDRLR-VEFRLWDVKDRKQIIGKKFFSSPA-SWRKIAHT 157
           F+ +   G+ ++VT     EG    R V+ R ++     ++ GK++    A    ++A  
Sbjct: 96  FKRFQLAGSDIVVT-TFWPEGDSGTRPVQIRAFETNTGGRLFGKEYPKVNARDLPEVADR 154

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
              D+ +++TG    F S + F+ ++   G + +++ ++   G ++R +T    + +  P
Sbjct: 155 FCADLLEALTGNGAFFRSTLAFIKKN---GKMDSNVWLVKPTGRDLRQITNMPGESM-SP 210

Query: 218 RFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRAL 273
            +SP+ + V +   D +   L V+      DR+  ++   R   ++++ P F  + K A 
Sbjct: 211 AWSPDGRFVVFTQIDPKSHALGVW------DRSTGKVQRIRFPGNVVIGPAFMPDNKVA- 263

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +++   +   I+ ++        L     IN+S ++    +++ F S R G  Q+++   
Sbjct: 264 VALSNGKYPVIFQLNHVFQKERVLEQNDSINVSPTFDSTGTKMAFTSSRLGGPQIFLKDL 323

Query: 334 NGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDS 390
                 R+S  K  +Y  +   SP G L+ +++ +  G +  +  M   G++ ++     
Sbjct: 324 GSGSVTRVS--KNGTYNSEANLSPDGTLVVYSRMTEYGHRIFVQDMLT-GTERQISFGPG 380

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD-PQW 442
           + + P++      + F+  + G  G  +Y    +G +   + T    S  P+W
Sbjct: 381 SDEQPSFCADSYFIAFTSSRGG--GRGIYLTTRHGGDAKRVPTGGGDSSFPRW 431


>gi|224537071|ref|ZP_03677610.1| hypothetical protein BACCELL_01948 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521298|gb|EEF90403.1| hypothetical protein BACCELL_01948 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 1082

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 21/160 (13%)

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           RF ++NG   + S     A D+Y V +     +RLT+ +   +   +SPD   I F    
Sbjct: 29  RFPATNGNEIVFSY----AGDLYRVPVTGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQY 84

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFTKFSGEKF 371
           +G  ++Y + + G + +R+      S+D       P      W+P G  I +     + F
Sbjct: 85  DGNTEVYTIPAAGGEPQRLTYTATNSRDDLGDRMGPNNIVMTWTPDGKQIIYRNRISDGF 144

Query: 372 A---IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           A     V ++ G  E + + +      ++SP G+ L ++R
Sbjct: 145 AGKLYSVNQEGGMPEIIPLPEGGFC--SYSPDGKRLAYNR 182



 Score = 44.3 bits (103), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 95/203 (46%), Gaps = 18/203 (8%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSP 311
           I N    + A   S +G+R +++ + +    ++++      T+ +T T   +   A +SP
Sbjct: 310 IKNGAKYLTAASASPDGERVVVTARGE----VFNLPSTKGVTKNITRTPGAHERDAQWSP 365

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I + SD  G+ +LY+  +   +  +++++ +       WSP    I +T     + 
Sbjct: 366 DGKCIAYISDATGETELYLQDAVEGNPVQLTKNNDTYIRSFEWSPDSKKIVYTD---RQN 422

Query: 372 AIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            I ++     Q  +L++D     Q  T+SP  + L ++R  D +  + +Y  D+ G+ E 
Sbjct: 423 RINLLDVASRQVTMLLQDPMGEPQDVTFSPDSKWLTYTRDADNEI-TVVYVYDIAGKKEY 481

Query: 430 LI-------NTPAYASDPQWVGF 445
            +       ++P +++D +++ F
Sbjct: 482 PVTDKWYNSSSPVFSTDGKYLIF 504


>gi|120611748|ref|YP_971426.1| peptidase S9 prolyl oligopeptidase [Acidovorax citrulli AAC00-1]
 gi|120590212|gb|ABM33652.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Acidovorax citrulli AAC00-1]
          Length = 661

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 98/225 (43%), Gaps = 21/225 (9%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR--ALI 274
           PR+SP+ ++VA+ +       +V+++      A +++G      L+  +S +G     L 
Sbjct: 70  PRWSPDGKQVAFISMRTGSS-QVFVIARHGGEA-RQVGALDGTALSAEWSPDGCSLAVLC 127

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQS 333
           +V  D   ++       +A    T    I     Y  D    V      G+E  L+V++ 
Sbjct: 128 TVAVDP--ELRGRRPGPDAPPPRTGGPRIVWRLPYKSDGLGYVL-----GQETHLFVLRV 180

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----SGEKFAIGVMKKDGSQERLLVE 388
           +    +R++ D   +     WSP G  IA  +       G +  +  ++ DG   R L +
Sbjct: 181 SDGQCRRLT-DGAFNVRAAAWSPDGRTIAMVRTRDSDTEGHRTDLWTLRADGGDARQLTD 239

Query: 389 D-SNLQAPTWSPSGRSLIFSRKKD-GDTGSKLYSIDL-NGRNETL 430
             + + +P WSP GR+++ S  +D GD   +L+  D   GR E L
Sbjct: 240 GLAQVLSPVWSPDGRTIVVSGSRDEGDALVRLWQCDAEGGRVEPL 284


>gi|307354079|ref|YP_003895130.1| hypothetical protein Mpet_1941 [Methanoplanus petrolearius DSM
           11571]
 gi|307157312|gb|ADN36692.1| hypothetical protein Mpet_1941 [Methanoplanus petrolearius DSM
           11571]
          Length = 447

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 21/151 (13%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSG 368
           P +   ++E   EG   L +M S+GSD++ +S     S   P W+PQG   LI   +++ 
Sbjct: 76  PCNCTSLWEGCVEGPALLNIMNSDGSDRRILSNLTVLSV--PSWNPQGTHLLILGGEYTD 133

Query: 369 -----EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK------ 417
                E     ++ KDGS ++ L  DS L   +WSP G ++ +  K  G    K      
Sbjct: 134 SFQNPENKGYWLVAKDGSNQQFLFNDSVLSY-SWSPDGSNIAYLSKVKGICLEKNVDGTC 192

Query: 418 -----LYSIDLNGRNETLINTPAYASDPQWV 443
                 Y + +   + +L       SDPQW+
Sbjct: 193 NYEQNAYVLKIFNLSTSLSRELNQVSDPQWI 223


>gi|54297561|ref|YP_123930.1| hypothetical protein lpp1611 [Legionella pneumophila str. Paris]
 gi|53751346|emb|CAH12762.1| hypothetical protein lpp1611 [Legionella pneumophila str. Paris]
          Length = 656

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 111/277 (40%), Gaps = 59/277 (21%)

Query: 210 RDQILFEPRFSPNQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIGNFR--SMILAPR 264
           R Q + EP  SP+ + VAY        ++I    +    +D    +   F   S    P+
Sbjct: 32  RIQDISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPK 91

Query: 265 FSSNGK--RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           +S NGK    L    K+    I+   +Q N   +LT+        ++SPDS++I F + +
Sbjct: 92  WSPNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTHIDGEVSDFTWSPDSNRIAFIAQK 151

Query: 323 ---------------------------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                                      +G++ LY+++       +++      Y  P WS
Sbjct: 152 SDPSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYL-PAWS 210

Query: 356 PQGDLIAFTKFSGE------KFAIGVMK-KDGSQERLLVE----------DSNLQAPTWS 398
           P G  IAF    G+       + I +++ K G++E  L            DSNL   +WS
Sbjct: 211 PDGKYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKEHQLTHFPGSDMNPDYDSNL---SWS 267

Query: 399 PSGRSLIFSRKKDGD----TGSKLYSIDLNGRNETLI 431
           P    + + R  +      + ++L  ID+N ++E +I
Sbjct: 268 PDSSKIAYLRSNEHQWTYYSPNQLAIIDINTKDEKII 304


>gi|300114275|ref|YP_003760850.1| WD40 domain-containing protein [Nitrosococcus watsonii C-113]
 gi|299540212|gb|ADJ28529.1| WD40 domain protein beta Propeller [Nitrosococcus watsonii C-113]
          Length = 366

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 93/231 (40%), Gaps = 46/231 (19%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD DG N+R ++  +  +      +P+ Q + YA+         +L     D+ P +   
Sbjct: 95  MDADGKNVRQVSSGKG-VTTCSFIAPDDQAIIYAS--------THLAG---DQCPPK--- 139

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                  P +S      L      E  DI+  D +     RLT+T   +    YSP   +
Sbjct: 140 -------PDYSQGYVWPLY-----EGYDIFRADPEGGNRVRLTDTPGYDAEGVYSPQGDK 187

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDK---EASYF--DPVW------SPQGDLIAFT 364
           I+F S R G  +L++M  +GS+ ++++        ++F  D  W       P+G  +A  
Sbjct: 188 IIFTSARTGDLELFMMSPDGSEMEQLTDQPGYDGGAFFSRDGQWIVWRASRPEGKALADY 247

Query: 365 K-------FSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFS 407
           +           +  I +M  +  +   L ++      P W P G+ +IFS
Sbjct: 248 QSLLKQGLIRPGRLEIFIMNLEERKPIQLTDNGAANFGPYWHPDGKHIIFS 298


>gi|265764805|ref|ZP_06093080.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263254189|gb|EEZ25623.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 1090

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 18/140 (12%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + + G    +++   + SY   P+WSP    IAF     
Sbjct: 31  SPDGTEIAFCY----KGDIYKVSAGGGTAIQLTT--QPSYECTPIWSPDSKQIAFASDRN 84

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS---------KL 418
             F I VM   G   + L   S+ + P+ ++P G+ ++FS      + S         +L
Sbjct: 85  GNFDIFVMPATGGTAQRLTTHSSSELPSAFTPDGKYILFSASIQDPSQSALFPTTAMTEL 144

Query: 419 YSIDLN-GRNETLINTPAYA 437
           Y + +N GR E ++ TPA A
Sbjct: 145 YKVPVNGGRTEQVLGTPAEA 164


>gi|256374817|ref|YP_003098477.1| peptidase S41 [Actinosynnema mirum DSM 43827]
 gi|255919120|gb|ACU34631.1| peptidase S41 [Actinosynnema mirum DSM 43827]
          Length = 1069

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 76/176 (43%), Gaps = 15/176 (8%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D++   L      R++       +  +SPD + + + S R+G  +++     G   +R++
Sbjct: 35  DVWLAPLDGGRAWRVSADQVRASTPRFSPDGAHLAWTSHRDGAPEVHAAPVLGGPARRLT 94

Query: 343 QDKEASYFDPVWSPQGDLIAFT---KFSGEK-FAIGVMKKDGSQERL-------LVEDSN 391
              + +     W+P G ++A +   + +G + +A  V    G  E+L       +    +
Sbjct: 95  HWGDYTTGVRTWTPDGRVVAVSTTGQATGNREWAHAVPLDGGPSEKLPYGWVGGVAYGPD 154

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS---DPQWVG 444
            Q  T S +GR   + ++  G T +KL+ +D+ G  E     P   S    P WVG
Sbjct: 155 RQVLTSSAAGRDPAWWKRYRGGTAAKLW-VDVEGGGEFTRVLPELTSPLTSPMWVG 209


>gi|262198210|ref|YP_003269419.1| peptidase M28 [Haliangium ochraceum DSM 14365]
 gi|262081557|gb|ACY17526.1| peptidase M28 [Haliangium ochraceum DSM 14365]
          Length = 944

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 25/163 (15%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL---- 328
           L +  +D  +++Y +D       RLTNT   +  A +S D SQIV+ + R   E L    
Sbjct: 196 LFTSDRDGDLELYRMDPNGENVVRLTNTPGYDGGAFFSQDCSQIVWRASRPQGEALADFQ 255

Query: 329 ---------------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFS---GE 369
                          YV  ++G + ++I+    A+ F P + P G  + F T +    G 
Sbjct: 256 RLLGEGLVRPSLLEIYVADADGQNARQITY-LGAAAFAPYFHPSGKRVLFSTNYPNPRGR 314

Query: 370 KFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +F I  +  DG+  E++   +     P +SP G  L F+  ++
Sbjct: 315 EFDIWSVNTDGTGLEQITFSEGFDGFPMFSPDGTKLAFASNRN 357



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 69/164 (42%), Gaps = 21/164 (12%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY      +    LT     +  A+       I+F SDR+G  +LY M  NG +  R++
Sbjct: 162 DIYRAKADGSELVNLTQRDGYDAEATVCAKDGTILFTSDRDGDLELYRMDPNGENVVRLT 221

Query: 343 QDK---EASYFDP-----VW---SPQGDLIA-FTKFSGEKFA------IGVMKKDGSQER 384
                   ++F       VW    PQG+ +A F +  GE         I V   DG   R
Sbjct: 222 NTPGYDGGAFFSQDCSQIVWRASRPQGEALADFQRLLGEGLVRPSLLEIYVADADGQNAR 281

Query: 385 LLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSK--LYSIDLNG 425
            +    +   AP + PSG+ ++FS       G +  ++S++ +G
Sbjct: 282 QITYLGAAAFAPYFHPSGKRVLFSTNYPNPRGREFDIWSVNTDG 325



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 5/91 (5%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----KDEAMDIYSVDLQS 291
           +L +Y+ D     A ++I    +   AP F  +GKR L S      +    DI+SV+   
Sbjct: 267 LLEIYVADADGQNA-RQITYLGAAAFAPYFHPSGKRVLFSTNYPNPRGREFDIWSVNTDG 325

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDR 322
              E++T +   +    +SPD +++ F S+R
Sbjct: 326 TGLEQITFSEGFDGFPMFSPDGTKLAFASNR 356


>gi|60679676|ref|YP_209820.1| putative peptidase/protease family protein [Bacteroides fragilis
           NCTC 9343]
 gi|253564534|ref|ZP_04841991.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|60491110|emb|CAH05858.1| putative peptidase/protease family protein [Bacteroides fragilis
           NCTC 9343]
 gi|251948310|gb|EES88592.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301161141|emb|CBW20679.1| putative peptidase/protease family protein [Bacteroides fragilis
           638R]
          Length = 1090

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 18/140 (12%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD ++I F      K  +Y + + G    +++   + SY   P+WSP    IAF     
Sbjct: 31  SPDGTEIAFCY----KGDIYKVSAGGGTAIQLTT--QPSYECTPIWSPDSKQIAFASDRN 84

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS---------KL 418
             F I VM   G   + L   S+ + P+ ++P G+ ++FS      + S         +L
Sbjct: 85  GNFDIFVMPATGGTAQRLTTHSSSELPSAFTPDGKYILFSASIQDPSQSALFPTTAMTEL 144

Query: 419 YSIDLN-GRNETLINTPAYA 437
           Y + +N GR E ++ TPA A
Sbjct: 145 YKVPVNGGRTEQVLGTPAEA 164


>gi|145593151|ref|YP_001157448.1| peptidase S9B dipeptidylpeptidase IV subunit [Salinispora tropica
           CNB-440]
 gi|145302488|gb|ABP53070.1| peptidase S9B, dipeptidylpeptidase IV domain protein [Salinispora
           tropica CNB-440]
          Length = 590

 Score = 46.6 bits (109), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 83/227 (36%), Gaps = 57/227 (25%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P ++ +G         DE   I   D ++     L         AS++PD  +IV+ ++ 
Sbjct: 253 PTWTRDGNHLFFHRLVDEGAGIAVWDRRTRVVRDLVPAEHKPRYASFAPDGRRIVYGTEA 312

Query: 323 EGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------------- 364
            G+ +L ++    G+ Q   +   EA++  P WSP G  IA T                 
Sbjct: 313 GGRSRLRILNLDTGTSQPLPA--GEAAF--PTWSPDGRTIACTVRPDPSSRWEIATVDVS 368

Query: 365 --------------------------------KFSGEKFAIGVMKKDGSQERL--LVEDS 390
                                           +   E F   ++  D +  R   L EDS
Sbjct: 369 SGQVQLWTTGRTDLRGLHAPVSFAPDGRRLVFRSETEPFEANLLVLDLNSGRFTNLTEDS 428

Query: 391 NL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
              +AP++SP GRS+IF   + GD     Y IDL+ +    +  P Y
Sbjct: 429 WWDEAPSFSPDGRSVIFMSTRGGDWTWGFYRIDLDSKEIVTVAGPDY 475



 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 10/105 (9%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRI---SQDKEASYFDPVWSPQGDLIA 362
            + +PD ++ V  S R G   L+    S+G  Q+       D EA      WSP G  + 
Sbjct: 33  GAIAPDGTRFVASSKRNGSVNLWFFDLSSGKWQQGTWGTGDDIEAQ-----WSPDGRQLT 87

Query: 363 FTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           FT   G   AI + +  DG   +L   D   + P+WSP G ++ F
Sbjct: 88  FTSSRGGHKAIWLYRLSDGQVRQLTSADHEEEYPSWSPDGSTVAF 132



 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 2/115 (1%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + S++PD   +V  S   G   ++++ S  ++  +++ D  +  + P   P    +AF++
Sbjct: 164 ACSWAPDGRWLVCHSYDTGAGAVWLLDSQTAEAIQVT-DGSSWDYKPTICPTRPAVAFSR 222

Query: 366 FSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +  +  I V +  DG+   L+V  ++ + PTW+  G  L F R  D   G  ++
Sbjct: 223 SNEGRSVIWVQRLGDGTGGPLVVTGADDRWPTWTRDGNHLFFHRLVDEGAGIAVW 277


>gi|152990959|ref|YP_001356681.1| translocation protein TolB [Nitratiruptor sp. SB155-2]
 gi|151422820|dbj|BAF70324.1| Tol biopolymer transport system component TolB [Nitratiruptor sp.
           SB155-2]
          Length = 407

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 43/83 (51%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           M++    S +GK+ L+++  +   DIY +DL      RLT    I+++ +Y  D  +IVF
Sbjct: 222 MLVCSDVSKDGKKLLLTMAPNYQPDIYELDLTKKTLRRLTTYPGIDVNGNYVEDGRRIVF 281

Query: 319 ESDREGKEQLYVMQSNGSDQKRI 341
            SDR G   ++  +      +R+
Sbjct: 282 VSDRLGNPTIFAKRIGSKAVERV 304


>gi|296107220|ref|YP_003618920.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidase [Legionella
           pneumophila 2300/99 Alcoy]
 gi|295649121|gb|ADG24968.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidase [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 656

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 111/277 (40%), Gaps = 59/277 (21%)

Query: 210 RDQILFEPRFSPNQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIGNFR--SMILAPR 264
           R Q + EP  SP+ + VAY        ++I    +    +D    +   F   S    P+
Sbjct: 32  RIQDISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPK 91

Query: 265 FSSNGK--RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           +S NGK    L    K+    I+   +Q N   +LT+        ++SPDS++I F + +
Sbjct: 92  WSPNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTHIDGEVSDFTWSPDSNRIAFIAQK 151

Query: 323 ---------------------------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                                      +G++ LY+++       +++      Y  P WS
Sbjct: 152 SDPSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYL-PAWS 210

Query: 356 PQGDLIAFTKFSGE------KFAIGVMK-KDGSQERLLVE----------DSNLQAPTWS 398
           P G  IAF    G+       + I +++ K G++E  L            DSNL   +WS
Sbjct: 211 PDGKYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKEHQLTHFPGSDMNPDYDSNL---SWS 267

Query: 399 PSGRSLIFSRKKDGD----TGSKLYSIDLNGRNETLI 431
           P    + + R  +      + ++L  ID+N ++E +I
Sbjct: 268 PDSSKIAYLRSNEHQWTYYSPNQLAIIDINTKDEKII 304


>gi|148359176|ref|YP_001250383.1| acylaminoacyl peptidase [Legionella pneumophila str. Corby]
 gi|148280949|gb|ABQ55037.1| acylaminoacyl peptidase [Legionella pneumophila str. Corby]
          Length = 656

 Score = 46.6 bits (109), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 111/277 (40%), Gaps = 59/277 (21%)

Query: 210 RDQILFEPRFSPNQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIGNFR--SMILAPR 264
           R Q + EP  SP+ + VAY        ++I    +    +D    +   F   S    P+
Sbjct: 32  RIQDISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPK 91

Query: 265 FSSNGK--RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           +S NGK    L    K+    I+   +Q N   +LT+        ++SPDS++I F + +
Sbjct: 92  WSPNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTHIDGEVSDFTWSPDSNRIAFIAQK 151

Query: 323 ---------------------------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                                      +G++ LY+++       +++      Y  P WS
Sbjct: 152 SDPSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYL-PAWS 210

Query: 356 PQGDLIAFTKFSGE------KFAIGVMK-KDGSQERLLVE----------DSNLQAPTWS 398
           P G  IAF    G+       + I +++ K G++E  L            DSNL   +WS
Sbjct: 211 PDGKYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKEHQLTHFPGSDMNPDYDSNL---SWS 267

Query: 399 PSGRSLIFSRKKDGD----TGSKLYSIDLNGRNETLI 431
           P    + + R  +      + ++L  ID+N ++E +I
Sbjct: 268 PDSSKIAYLRSNEHQWTYYSPNQLAIIDINTKDEKII 304


>gi|323702980|ref|ZP_08114637.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Desulfotomaculum nigrificans DSM 574]
 gi|323532111|gb|EGB21993.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Desulfotomaculum nigrificans DSM 574]
          Length = 464

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 21/150 (14%)

Query: 306 SASYSPDSSQIVFESDREGKE---QLYV--MQSNGSDQKRISQDKEASYFDPVW------ 354
           S ++SPD  Q+ F     G E   QL V  + S GS    +     + +  P W      
Sbjct: 182 SPTWSPDGHQVAFVVGSHGVEEIQQLPVVNLTSGGSKFSNLKPKDNSQWAKPAWHYANLT 241

Query: 355 -SPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            SP GD +A+  K +GE   + V    G Q RL+ +      P WSP G+ L+  ++ D 
Sbjct: 242 FSPGGDTLAYVVKRAGEPAEVWVKPITG-QARLVTQGD---YPAWSPDGKHLVV-QQPDK 296

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           +    LY +D+   +  L+        P W
Sbjct: 297 ENSYVLYLVDIKTGDTQLLGP---GERPTW 323


>gi|163849346|ref|YP_001637390.1| WD40 domain-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222527342|ref|YP_002571813.1| WD40 domain-containing protein [Chloroflexus sp. Y-400-fl]
 gi|163670635|gb|ABY37001.1| WD40 domain protein beta Propeller [Chloroflexus aurantiacus
           J-10-fl]
 gi|222451221|gb|ACM55487.1| WD40 domain protein beta Propeller [Chloroflexus sp. Y-400-fl]
          Length = 620

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 2/91 (2%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           N    L+N    +  A  SPD   I F SDR+G  ++YVM S+GS+ +R++ +  A+   
Sbjct: 512 NNIRNLSNNAANDRFARISPDGRTIAFASDRDGNWEIYVMNSDGSNVRRLTNNA-ATDDS 570

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMK-KDGS 381
           P WS     +AF       F I ++   DG+
Sbjct: 571 PTWSLTNQQLAFASDRDGDFEIYILNVSDGA 601



 Score = 44.3 bits (103), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 24/93 (25%), Positives = 52/93 (55%), Gaps = 2/93 (2%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R S +G+    +  +D   +IY ++   +   RLTN    + S ++S  + Q+ F SDR+
Sbjct: 528 RISPDGRTIAFASDRDGNWEIYVMNSDGSNVRRLTNNAATDDSPTWSLTNQQLAFASDRD 587

Query: 324 GKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWS 355
           G  ++Y++  S+G+  ++++Q+     + P+W+
Sbjct: 588 GDFEIYILNVSDGAIVQQVTQNTAQDRW-PLWA 619



 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 14/121 (11%)

Query: 306 SASYSPDSSQIVFESDREGKEQLY------------VMQSNGSDQKRISQDKEASYFDPV 353
           S ++SPD   + + ++ EG  ++Y                + ++ + +S +     F  +
Sbjct: 470 SPTWSPDGRYLFWVTNCEGNFEIYRATIVFYYIDDLFASISLNNIRNLSNNAANDRFARI 529

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            SP G  IAF       + I VM  DGS  R L  ++    +PTWS + + L F+  +DG
Sbjct: 530 -SPDGRTIAFASDRDGNWEIYVMNSDGSNVRRLTNNAATDDSPTWSLTNQQLAFASDRDG 588

Query: 413 D 413
           D
Sbjct: 589 D 589



 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 21/156 (13%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSN-----GSDQKRISQDKEASYFDPVWSPQGDL 360
           +AS SPD + + F S+R+G  QLY+ + N     G      + D+  +   P WSP G  
Sbjct: 420 NASVSPDGTLLAFVSERQGIPQLYLRRLNVSPLRGYASPITAYDRPCNVESPTWSPDGRY 479

Query: 361 IAFTKFSGEKFAIGVMK-------------KDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           + +       F I                    +   L    +N +    SP GR++ F+
Sbjct: 480 LFWVTNCEGNFEIYRATIVFYYIDDLFASISLNNIRNLSNNAANDRFARISPDGRTIAFA 539

Query: 408 RKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQW 442
             +DG+   ++Y ++ +G N   L N  A    P W
Sbjct: 540 SDRDGNW--EIYVMNSDGSNVRRLTNNAATDDSPTW 573


>gi|317037459|ref|XP_001398515.2| hypothetical protein ANI_1_970164 [Aspergillus niger CBS 513.88]
          Length = 650

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 14/134 (10%)

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEAS 348
           SN    L N    +  A +SPD   IVF S+R G  Q  LY ++ NG+D + I+      
Sbjct: 45  SNPRLLLGNESTFDYHAQWSPDGEWIVFTSERAGDGQSDLYRVRPNGTDLQPIATSPAVE 104

Query: 349 YFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVEDSNLQA----------PTW 397
               + SP G L+AF    G  K  I +   D      +   + +            P W
Sbjct: 105 DAGAI-SPNGSLVAFAGTLGNYKSNIWIQNLDTGALWNVTNSTEVAGDYTLPDGHFRPAW 163

Query: 398 SPSGRSLIFSRKKD 411
           SP G  L+F+  ++
Sbjct: 164 SPDGEWLVFTSDRN 177


>gi|145593173|ref|YP_001157470.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Salinispora tropica CNB-440]
 gi|145302510|gb|ABP53092.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Salinispora tropica CNB-440]
          Length = 590

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 9/160 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +G R + S ++  +++++  ++ +    + T     +I A +SPDS+ + F S R G
Sbjct: 36  ISPDGTRFVASSRRTGSLNLWFYEIATEQWHQGTRGAGDDIEAQWSPDSACLAFTSSRCG 95

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            + +++ + +   + RIS+     Y +  P WSP G  I F      +  + ++   G  
Sbjct: 96  HKAVWLYRLH---EARISRLTFGPYDEEYPNWSPDGSKITFVGGGWAQRQVYLVSATGGP 152

Query: 383 ERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +  E     A T+ P G  LI       DTG+   SI
Sbjct: 153 PMPVTDEPGRTGACTYLPDGSGLICHSY---DTGASAVSI 189


>gi|134084093|emb|CAK43122.1| unnamed protein product [Aspergillus niger]
          Length = 675

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 14/134 (10%)

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEAS 348
           SN    L N    +  A +SPD   IVF S+R G  Q  LY ++ NG+D + I+      
Sbjct: 70  SNPRLLLGNESTFDYHAQWSPDGEWIVFTSERAGDGQSDLYRVRPNGTDLQPIATSPAVE 129

Query: 349 YFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVEDSNLQA----------PTW 397
               + SP G L+AF    G  K  I +   D      +   + +            P W
Sbjct: 130 DAGAI-SPNGSLVAFAGTLGNYKSNIWIQNLDTGALWNVTNSTEVAGDYTLPDGHFRPAW 188

Query: 398 SPSGRSLIFSRKKD 411
           SP G  L+F+  ++
Sbjct: 189 SPDGEWLVFTSDRN 202


>gi|297530850|ref|YP_003672125.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. C56-T3]
 gi|297254102|gb|ADI27548.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. C56-T3]
          Length = 673

 Score = 46.2 bits (108), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 6/113 (5%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDL----QSNATERLTNTLFINISASYSPDSSQIVF 318
           P ++ +G RA+   +  +    Y   L       +  + T   + ++   +SP    I F
Sbjct: 27  PHYAPDGTRAVFVEKSIDEEKQYRSHLWLWAADGSVRQWTFGRWRDMKPRFSPRGEMIAF 86

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEK 370
            SDR G+ QL+++ +NG + ++++  K     D VWSP G  LIA T    E+
Sbjct: 87  LSDRSGRTQLWLLPANGGEARQLTFFKNGVR-DYVWSPDGTFLIALTTLGDEE 138


>gi|262196482|ref|YP_003267691.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262079829|gb|ACY15798.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1547

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 60/252 (23%), Positives = 111/252 (44%), Gaps = 23/252 (9%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +VS     ++ V   DG     +    D  +    FSP+   +A A+ D+   +RV+   
Sbjct: 1015 IVSASTDKTVRVWRTDGTGQALVLHGHDGAVTSASFSPDGAHIASASSDE--TIRVW--- 1069

Query: 244  TRIDRA--PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             R D A  P  +      + +  F  +G + ++S   D+ + ++  D   N+     +  
Sbjct: 1070 -RADGAGQPVILSGHGETVWSVSFRPDGSQ-IVSASHDKTVRVWRADGTGNSRVLRGHDD 1127

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            F+ +SAS+SPD +QIV  S     + + V  ++G+ +  I +  +   +   +SP+G  I
Sbjct: 1128 FV-MSASFSPDGTQIVSTSS---DKTVRVWPADGAGEPLILRGHDDVVWSASFSPEGTHI 1183

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
              T  S +K  + +     S E L +   D  + + ++SP G  L+       D   +++
Sbjct: 1184 --TSASSDK-TVRIWGPGDSDEPLALHGHDDAVMSASFSPDGTRLV---SASADKTVRVW 1237

Query: 420  SIDLNGRNETLI 431
              D  G NE LI
Sbjct: 1238 GTD--GSNEPLI 1247



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 10/157 (6%)

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            D AP    +    ++  RFS  G   L+S   D+ + ++  D          +   + +S
Sbjct: 906  DIAPVVFTDHIEAVMTARFSPEGTH-LVSASADKTVRVWRADGTGQPVVLRGHEDAV-MS 963

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            AS+SPD + IV  S     + + V +++G+ Q  + +  EAS     +SP G  I     
Sbjct: 964  ASFSPDGAHIVSAS---VDKTVRVWRADGTGQPIVLRGHEASVMSASFSPDGARI--VSA 1018

Query: 367  SGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSG 401
            S +K  + V + DG+ + L++   D  + + ++SP G
Sbjct: 1019 STDK-TVRVWRTDGTGQALVLHGHDGAVTSASFSPDG 1054



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 18/230 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +VS     ++ V   DG+N   +    D ++    FSP+   +  A+ D    +RV+  D
Sbjct: 1225 LVSASADKTVRVWGTDGSNEPLILRGHDSVVISASFSPDGAHLVTASAD--KTVRVWRAD 1282

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +  P  +      +   RFS +G   L++   D+ + ++  D      E L      
Sbjct: 1283 GAGE--PLTLRGHDEAVWTARFSPDGTH-LVTASADQTVRVWKAD---GTGEPLVLRGHD 1336

Query: 304  NI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            N+  SA YS D +Q+V  S     + + V Q++G+ +  + +  + +     +SP G  I
Sbjct: 1337 NVVWSADYSRDGTQLVSAS---WDKTVRVWQADGTGEPLVLRGHDEAVMSASFSPDGTNI 1393

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRK 409
                +      + V K DG+   L++      + + ++S  GR ++ + +
Sbjct: 1394 VSASWDK---TVRVWKADGAGVPLILRGHGEAVLSASFSQDGRYIVSTSR 1440


>gi|325920630|ref|ZP_08182542.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas gardneri ATCC 19865]
 gi|325548886|gb|EGD19828.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas gardneri ATCC 19865]
          Length = 778

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 11/222 (4%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRA 272
             P  SP+   VAYA+   +      L+ T  +  P+ +    + I    P +S +G+  
Sbjct: 228 LTPSLSPDGAMVAYASLTSDRAGTSILVKTTNNAYPRVLDTPAAGISDRLPAWSPDGREI 287

Query: 273 LISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQ 327
             S Q  +    + I + +  + A E +       +S S+SPD   ++F S     G  +
Sbjct: 288 AFSRQAPDGSCRIMIAAANGPAAAREVVRCDGADMLSFSWSPDGRGLLFGSMTGAHGAPR 347

Query: 328 LYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +  +       + +    +   FD  P +SP G  I F +         +    G+ ERL
Sbjct: 348 IRRLDLETGQWQPLVYSAQPQDFDYAPRYSPDGHWIVFLRNPQLGDLWRIPATGGTAERL 407

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             ++++++  +W P G  +IF R+ D +  ++LY +DL  R+
Sbjct: 408 THDNADIRGWSWLPDGSGVIFGRRVDSE--ARLYRLDLRDRS 447


>gi|239826379|ref|YP_002949003.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. WCH70]
 gi|239806672|gb|ACS23737.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. WCH70]
          Length = 670

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 8/123 (6%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQ 343
           L+    E L    F+N    +SPD  +++F     + +RE +  L+++        + + 
Sbjct: 10  LRVITAEDLFRIRFVN-DPQFSPDGEKVIFVQKTIDDEREYRSHLFLLTLADGKVNQWTF 68

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGR 402
            K    F P WSP G  IAF      K  I ++  DG + R L    N ++   WSP GR
Sbjct: 69  GKVKDAF-PRWSPDGKTIAFLSNRSGKTQIWLLPTDGGEARQLTALKNGVRHLRWSPDGR 127

Query: 403 SLI 405
            L+
Sbjct: 128 FLV 130



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 7/111 (6%)

Query: 263 PRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           P+FS +G++ +     I  +++    ++ + L      + T     +    +SPD   I 
Sbjct: 27  PQFSPDGEKVIFVQKTIDDEREYRSHLFLLTLADGKVNQWTFGKVKDAFPRWSPDGKTIA 86

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFS 367
           F S+R GK Q++++ ++G + ++++  K        WSP G  L+A T   
Sbjct: 87  FLSNRSGKTQIWLLPTDGGEARQLTALKNGVR-HLRWSPDGRFLVALTSLG 136


>gi|329957533|ref|ZP_08298008.1| WD40-like protein [Bacteroides clarus YIT 12056]
 gi|328522410|gb|EGF49519.1| WD40-like protein [Bacteroides clarus YIT 12056]
          Length = 1089

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 16/139 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD ++I F      K  +Y + + G    +++  +E+    PVWSP G  IAF      
Sbjct: 31  SPDGTEIAFCY----KGDIYKVPAKGGTAIQLTT-QESYESTPVWSPDGKQIAFASDRYG 85

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS---------KLY 419
            F + VM  +G   + L   S  + P+ ++P G+ ++FS        S         +LY
Sbjct: 86  NFDVFVMPANGGTAQRLTTHSAGEIPSAFTPDGKYILFSAAIQDPAESALFPRSAMTELY 145

Query: 420 SIDL-NGRNETLINTPAYA 437
            + +  GR E ++ TPA A
Sbjct: 146 KVPVTGGRTEQVLGTPAEA 164



 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V  +     +LT       +  +SPD  QI F SDR G   ++VM +NG   +R++
Sbjct: 44  DIYKVPAKGGTAIQLTTQESYESTPVWSPDGKQIAFASDRYGNFDVFVMPANGGTAQRLT 103

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               A      ++P G  I F+
Sbjct: 104 T-HSAGEIPSAFTPDGKYILFS 124


>gi|194359645|gb|ACF57670.1| EstC [Geobacillus thermoleovorans]
          Length = 673

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 6/113 (5%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDL----QSNATERLTNTLFINISASYSPDSSQIVF 318
           P ++ +G RA+   +  +    Y   L       +  + T   + ++   +SP    I F
Sbjct: 27  PHYAPDGTRAVFVEKSIDEEKQYRSHLWIWAADGSVRQWTFGRWRDMKPRFSPRGEMIAF 86

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEK 370
            SDR G+ QL+++ +NG + ++++  K     D VWSP G  LIA T    E+
Sbjct: 87  LSDRSGRTQLWLLPANGGEARQLTFFKNGVR-DYVWSPDGTFLIALTTLGDEE 138



 Score = 36.6 bits (83), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 12/105 (11%)

Query: 309 YSPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLI 361
           Y+PD ++ VF     + +++ +  L++  ++GS    + Q     + D  P +SP+G++I
Sbjct: 29  YAPDGTRAVFVEKSIDEEKQYRSHLWIWAADGS----VRQWTFGRWRDMKPRFSPRGEMI 84

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
           AF      +  + ++  +G + R L    N ++   WSP G  LI
Sbjct: 85  AFLSDRSGRTQLWLLPANGGEARQLTFFKNGVRDYVWSPDGTFLI 129


>gi|56419496|ref|YP_146814.1| acylaminoacyl-peptidase [Geobacillus kaustophilus HTA426]
 gi|56379338|dbj|BAD75246.1| acylaminoacyl-peptidase [Geobacillus kaustophilus HTA426]
          Length = 673

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 6/113 (5%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDL----QSNATERLTNTLFINISASYSPDSSQIVF 318
           P ++ +G RA+   +  +    Y   L       +  + T   + ++   +SP    I F
Sbjct: 27  PHYAPDGTRAVFVEKSIDEEKQYRSHLWIWAADGSVRQWTFGRWRDMKPRFSPRGEMIAF 86

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEK 370
            SDR G+ QL+++ +NG + ++++  K     D VWSP G  LIA T    E+
Sbjct: 87  LSDRSGRTQLWLLPANGGEARQLTFFKNGVR-DYVWSPDGTFLIALTTLGDEE 138



 Score = 36.6 bits (83), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 53/105 (50%), Gaps = 12/105 (11%)

Query: 309 YSPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLI 361
           Y+PD ++ VF     + +++ +  L++  ++GS    + Q     + D  P +SP+G++I
Sbjct: 29  YAPDGTRAVFVEKSIDEEKQYRSHLWIWAADGS----VRQWTFGRWRDMKPRFSPRGEMI 84

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
           AF      +  + ++  +G + R L    N ++   WSP G  LI
Sbjct: 85  AFLSDRSGRTQLWLLPANGGEARQLTFFKNGVRDYVWSPDGTFLI 129


>gi|85680311|gb|ABC72341.1| basic membrane protein [uncultured haloarchaeon]
          Length = 629

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 5/162 (3%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDR 322
             +G   ++   +D  M++Y  DL S  T +LT           SP+  +I +   ESD 
Sbjct: 118 GEDGDTLIVGSSRDGQMNLYYHDLPSGETTKLTEYERAAAGGILSPECDRIAYATNESDD 177

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              + +YV   +GS  + ++     +   P  W P G+ +  +  S +   +GV   D  
Sbjct: 178 FDNQDVYVADIDGSTPQNLNLGDTGAEASPADWGPDGERLLISDNSPDLGRLGVYHFDSE 237

Query: 382 QERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   L  D+  ++P  + P G  ++  R ++ ++   +Y+I+
Sbjct: 238 EVTWLENDAFEESPKAFLPDGERVLGYRSREAESVPIIYNIE 279


>gi|284032800|ref|YP_003382731.1| beta-lactamase [Kribbella flavida DSM 17836]
 gi|283812093|gb|ADB33932.1| beta-lactamase [Kribbella flavida DSM 17836]
          Length = 1117

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 11/108 (10%)

Query: 308 SYSPDSSQIVF-------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           + SPD +Q+V+        +DR  +  L+ + S G + +R++  +  S   P WSP G  
Sbjct: 20  ALSPDGNQVVYVLRTIDAAADRT-EHALWRVPSAGGEARRLT--RGTSDRAPAWSPDGTK 76

Query: 361 IAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFS 407
           +AF +       + ++  DG + E+L         P+WSP G  + FS
Sbjct: 77  LAFLRAQDGPPQLWLLPADGGEPEQLTTLPLGAGTPSWSPDGERIAFS 124



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           + A+  +   G + R L   ++ +AP WSP G  L F R +DG     L   D  G  E 
Sbjct: 43  EHALWRVPSAGGEARRLTRGTSDRAPAWSPDGTKLAFLRAQDGPPQLWLLPAD-GGEPEQ 101

Query: 430 LINTPAYASDPQW 442
           L   P  A  P W
Sbjct: 102 LTTLPLGAGTPSW 114



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 16/59 (27%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           + ++SPD +++ F   ++G  QL+++ ++G + ++++     +   P WSP G+ IAF+
Sbjct: 67  APAWSPDGTKLAFLRAQDGPPQLWLLPADGGEPEQLTTLPLGA-GTPSWSPDGERIAFS 124


>gi|124006957|ref|ZP_01691786.1| MdsD protein [Microscilla marina ATCC 23134]
 gi|123987410|gb|EAY27130.1| MdsD protein [Microscilla marina ATCC 23134]
          Length = 1083

 Score = 46.2 bits (108), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 74/167 (44%), Gaps = 24/167 (14%)

Query: 282 MDIYSVDL--QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           M + SV L  Q+  + + TNT  I      SPD S IVF      K  LY + + G    
Sbjct: 1   MLLMSVGLYTQAQISPQWTNTPAI------SPDGSTIVFSY----KGDLYKVPTQGGTAT 50

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWS 398
            ++  K      PVWS  G  IAF       F I ++   G Q +RL    SN    +++
Sbjct: 51  LLTLHKGHD-MKPVWSKDGQSIAFMSDRYGNFDIYLISAKGGQAKRLTYHSSNDVPSSFT 109

Query: 399 PSGRSLIF--SRKKDGDTG-------SKLYSIDLNGRNET-LINTPA 435
           P G++++F  SR  +           S+LY + L G   T ++ TPA
Sbjct: 110 PDGKAVLFRSSRLDNAQNAMFPSGAMSELYQVSLKGGKPTQILTTPA 156



 Score = 45.1 bits (105), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG- 324
           S NGK     V+ +    I++  ++   T+R+TNT     + S+SPD   I++  +R G 
Sbjct: 316 SPNGKEVAFVVRGE----IFAASIEGGTTKRITNTPEQERNISFSPDGRSILYAGERNGS 371

Query: 325 ----------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                     KE+ Y   +    +  + + K+ + FDP +SP G  +AF +   E+  + 
Sbjct: 372 WNLYQTSLTRKEEKYFFSATILKETPVLESKKET-FDPKYSPDGKEVAFLE---ERTTLR 427

Query: 375 VMKKDGSQERLLVEDS-------NLQAPTWSPSGR 402
           V+     + R++V  +         Q   WSP G+
Sbjct: 428 VINLASKKVRVIVPGNRNYSYVDGDQYYDWSPDGK 462


>gi|138894519|ref|YP_001124972.1| acylaminoacyl-peptidase [Geobacillus thermodenitrificans NG80-2]
 gi|134266032|gb|ABO66227.1| Acylaminoacyl-peptidase [Geobacillus thermodenitrificans NG80-2]
          Length = 672

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 8/111 (7%)

Query: 263 PRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           P ++S+G   +     I  +K     +Y +  +  A  + T   + +    +SPDS  I 
Sbjct: 26  PHYASDGTHGVFVQKSIDEEKQYCSHLY-IWTEDGAVRQWTFGRWRDTRPRFSPDSKTIA 84

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFS 367
           F SDR G  QL+++ ++G + ++++  K     D VW+P G  LIA T   
Sbjct: 85  FLSDRSGHTQLWLLPADGGEARQLTFFKNGVR-DYVWAPDGTFLIALTTLG 134


>gi|304313236|ref|YP_003812834.1| hypothetical protein HDN1F_36240 [gamma proteobacterium HdN1]
 gi|301798969|emb|CBL47207.1| conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 997

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 6/98 (6%)

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +M+ NGS  KRI+Q     Y    WSP G  IA     G +  I ++  +G + R +   
Sbjct: 414 LMRWNGSRWKRITQC--GRYLSGYWSPNGGQIAAVSMHGGQARIELLHANGERIRTVYRA 471

Query: 390 SNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +  +A     W P G  L  +RK  G    +L S+DLN
Sbjct: 472 AVGEAVGGLAWHPEGHLLAVARKSVGGV-WRLASLDLN 508


>gi|124008206|ref|ZP_01692903.1| peptidase, S41 family [Microscilla marina ATCC 23134]
 gi|123986305|gb|EAY26127.1| peptidase, S41 family [Microscilla marina ATCC 23134]
          Length = 1066

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 13/156 (8%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G +   S Q D    I+ +        RLT     + +  +S D   I F S+R
Sbjct: 30  PAISPDGNQVAFSFQGD----IWVMAANGGVARRLTIHQGYDANPIWSSDGKHIAFSSNR 85

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI------AFTKFSGEKFAIGVM 376
                ++ + +NG   KR++           W+ Q +++      A+ + + E+    V 
Sbjct: 86  ASNYDVFTIPANGGATKRLTYHSSGDQ-ATCWTAQNEVLFTSRVRAYRQIAYEREIHKVS 144

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            + G+ +R+L  D+    PT SP+G+ + F R   G
Sbjct: 145 AEGGTPQRML--DAQGYMPTQSPNGKLIAFVRGTCG 178



 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 97/224 (43%), Gaps = 32/224 (14%)

Query: 203 IRYLTPSRD-QILFEPRFS-----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           IRY   SR+ Q++FE + S      N+ K    T    +       D R D+   +   +
Sbjct: 261 IRYFGVSRNNQLVFERQISLYTMNANEGKAKKLTIQATN-------DYRFDQVTHQT--Y 311

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           R+ +   + + NGK   + ++ +  + I  +         L++  F + S  +  DS+ +
Sbjct: 312 RNGVADYKVAPNGKYVAVEIRGE--IFIKPIAKDKRKAMNLSDHAFRDESPEWLNDST-L 368

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQ----------DKEASYFDPVWSPQGDLIAFTKF 366
           VF SDR G+  LY+++S    Q  + +            +A  F P  SP G  IA+ + 
Sbjct: 369 VFISDRNGQRDLYLVRSIDKKQSNLYKTLKTKVIQLTQTKAEEFAPTLSPNGKKIAYRRG 428

Query: 367 SGEKFAIGVMKKDG--SQERLLVED-SNLQAPTWSPSGRSLIFS 407
            GE   +  +   G  S E++LV+  +      WSP  R L +S
Sbjct: 429 RGE-LVVASISATGKLSNEKVLVKGWATPGGVAWSPDSRWLSYS 471


>gi|24372890|ref|NP_716932.1| TolB domain-containing protein [Shewanella oneidensis MR-1]
 gi|24347011|gb|AAN54377.1|AE015575_3 TolB domain protein [Shewanella oneidensis MR-1]
          Length = 413

 Score = 46.2 bits (108), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 78/164 (47%), Gaps = 9/164 (5%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI+  DL S   +RLT  L      S++PDS  +VF ++  G    + +  N +  +  S
Sbjct: 53  DIFIRDLASAHEKRLTQGLEDIRGLSWTPDSQALVFATEDSGSSNGFTLDINTAQIR--S 110

Query: 343 QDKEASYFDPVWSPQGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            D E   +    S +G+L+      +F    F++G  K  GS   LL    + + P +SP
Sbjct: 111 LDVEGMSYPSSVSAEGELVYHQYHRQFQMAYFSLGD-KVPGSLFPLLYSGVSHRNPDYSP 169

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQW 442
             + ++F   + G   +++++ D+NG+  E L    +  + P+W
Sbjct: 170 EAKRIVFVSSETGY--NEIWTSDINGQKLEQLTQLKSRVAYPRW 211



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 64/270 (23%), Positives = 104/270 (38%), Gaps = 55/270 (20%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+ Q + +AT +D      + +D  I+ A  R  +   M      S+ G+  L+  Q 
Sbjct: 79  WTPDSQALVFAT-EDSGSSNGFTLD--INTAQIRSLDVEGMSYPSSVSAEGE--LVYHQY 133

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNG 335
                +    L       L   L+  +S     YSP++ +IVF S   G  +++    NG
Sbjct: 134 HRQFQMAYFSLGDKVPGSLFPLLYSGVSHRNPDYSPEAKRIVFVSSETGYNEIWTSDING 193

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFT------------------------------- 364
              ++++Q K    + P WSP G  IAF                                
Sbjct: 194 QKLEQLTQLKSRVAY-PRWSPDGSRIAFIAPDDRNEGNRIFILDLTNKNITALASSYHNH 252

Query: 365 ---KFSGEKFAIGVMKKDGSQERLL------VEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
               ++ +  A+     DG  E  L      V  S   A  ++ S   L+FSR  DG+ G
Sbjct: 253 GRPSWNWQGTAVLASTADGITEFYLDNRAPRVISSLSMAVGFAKSATELVFSR--DGENG 310

Query: 416 SKLYSIDLNG--RNETLINTPAYASDPQWV 443
             L+ I+L      E LI+T A+ +   WV
Sbjct: 311 --LWQINLTQPEHVEQLISTDAFRAGNNWV 338


>gi|196247878|ref|ZP_03146580.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. G11MC16]
 gi|196212662|gb|EDY07419.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. G11MC16]
          Length = 672

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 8/111 (7%)

Query: 263 PRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           P ++S+G   +     I  +K     +Y +  +  A  + T   + +    +SPDS  I 
Sbjct: 26  PHYASDGTHGVFVQKSIDEEKQYCSHLY-IWTEDGAVRQWTFGRWRDTRPRFSPDSKTIA 84

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFS 367
           F SDR G  QL+++ ++G + ++++  K     D VW+P G  LIA T   
Sbjct: 85  FLSDRSGHTQLWLLPADGGEARQLTFFKNGVR-DYVWAPDGTFLIALTTLG 134


>gi|317038874|ref|XP_003188680.1| hypothetical protein ANI_1_2282184 [Aspergillus niger CBS 513.88]
          Length = 319

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 33/171 (19%)

Query: 277 QKDEAMDIYSVDLQSNAT-----ERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYV 330
           + D   DIY V +   +T     E + ++  ++ SAS SPD   + F + R  +  Q+ +
Sbjct: 95  RGDGQADIYRVAINGTSTVGAEVEPVASSPGVDDSASISPDGKMLAFATSRYNQTSQIML 154

Query: 331 MQSNGSDQKR------ISQDKEAS----YFDPVWSPQGDLIAFTK-----------FSG- 368
           M       K       IS+   ++    YF P WSP G+ I FT             SG 
Sbjct: 155 MVLETGSLKNLTLIPGISEAANSALPNGYFKPTWSPDGEWIVFTSDRNTPWRGHSDGSGW 214

Query: 369 ---EKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDT 414
              ++ +I   + +G+  RL+   SN    +P +SP+G+ L+F      DT
Sbjct: 215 EHTQELSIYAARPNGTDFRLVSSRSNYTQGSPRFSPNGKRLVFYEMLTEDT 265


>gi|229819021|ref|YP_002880547.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Beutenbergia cavernae DSM 12333]
 gi|229564934|gb|ACQ78785.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Beutenbergia cavernae DSM 12333]
          Length = 610

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 2/73 (2%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP G L+A++      +++ V    G + R L   +D +++A  WSPSG  L FS  +DG
Sbjct: 20  SPDGTLVAYSAHDDGAYSLLVRPVAGGEPRRLARFDDRSVRAVAWSPSGDRLAFSADRDG 79

Query: 413 DTGSKLYSIDLNG 425
           D  ++++ +  +G
Sbjct: 80  DEQTQIFVVGADG 92



 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 58/124 (46%), Gaps = 6/124 (4%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT- 364
           + + SPD + + + +  +G   L V    G + +R+++  + S     WSP GD +AF+ 
Sbjct: 16  AVALSPDGTLVAYSAHDDGAYSLLVRPVAGGEPRRLARFDDRSVRAVAWSPSGDRLAFSA 75

Query: 365 -KFSGEKFAIGVMKKDGSQE-RLLVEDS---NLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +   E+  I V+  DG    RL   D     L    ++P G +L++S     ++ S + 
Sbjct: 76  DRDGDEQTQIFVVGADGGDPVRLTDRDDRQYGLAEQPFTPDGATLVYSGNDRDESASDVL 135

Query: 420 SIDL 423
             DL
Sbjct: 136 VHDL 139


>gi|134074975|emb|CAK39055.1| unnamed protein product [Aspergillus niger]
          Length = 649

 Score = 45.8 bits (107), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 35/185 (18%)

Query: 265 FSSNGKRALISVQK--DEAMDIYSVDLQSNAT-----ERLTNTLFINISASYSPDSSQIV 317
           +S + K    + ++  D   DIY V +   +T     E + ++  ++ SAS SPD   + 
Sbjct: 46  WSPDAKHVYFTSERRGDGQADIYRVAINGTSTVGAEVEPVASSPGVDDSASISPDGKMLA 105

Query: 318 FESDREGK-EQLYVMQSNGSDQKR------ISQDKEAS----YFDPVWSPQGDLIAFTK- 365
           F + R  +  Q+ +M       K       IS+   ++    YF P WSP G+ I FT  
Sbjct: 106 FATSRYNQTSQIMLMVLETGSLKNLTLIPGISEAANSALPNGYFKPTWSPDGEWIVFTSD 165

Query: 366 ----------FSG----EKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRK 409
                      SG    ++ +I   + +G+  RL+   SN    +P +SP+G+ L+F   
Sbjct: 166 RNTPWRGHSDGSGWEHTQELSIYAARPNGTDFRLVSSRSNYTQGSPRFSPNGKRLVFYEM 225

Query: 410 KDGDT 414
              DT
Sbjct: 226 LTEDT 230


>gi|218779970|ref|YP_002431288.1| hypothetical protein Dalk_2126 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761354|gb|ACL03820.1| WD40 domain protein beta Propeller [Desulfatibacillum alkenivorans
           AK-01]
          Length = 345

 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/157 (21%), Positives = 73/157 (46%), Gaps = 11/157 (7%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI+++    +   +LT T   + + S+SPD ++I++     G   +Y+M  +G ++ +++
Sbjct: 79  DIWTMRSDGSNLTKLTETGTAS-APSWSPDGTRIIYTDSAAGNRDIYIMDQDGENKVQLT 137

Query: 343 QDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------ 395
              +   F+   SP G  IA+  +++G    +  M  DGS ++ ++    L A       
Sbjct: 138 S-ADNDEFNACMSPDGATIAYIYEYNGNNRRLWTMAADGSSQQEVLAPVTLNATYDTITF 196

Query: 396 --TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
              WS  G  L+            L+S++++  ++ L
Sbjct: 197 TNGWSTDGTYLLIQTSAPSANYKDLWSVNMSNVSDVL 233



 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 19/205 (9%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR-----A 249
           +MD+DG N   LT S D   F    SP+   +AY    + +  R++ M           A
Sbjct: 125 IMDQDGENKVQLT-SADNDEFNACMSPDGATIAYIYEYNGNNRRLWTMAADGSSQQEVLA 183

Query: 250 PKRI-GNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATE--RLTNTL--- 301
           P  +   + ++     +S++G   LI      A   D++SV++ SN ++  RLT+     
Sbjct: 184 PVTLNATYDTITFTNGWSTDGTYLLIQTSAPSANYKDLWSVNM-SNVSDVLRLTDASGGT 242

Query: 302 --FINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQ 357
              +  S   S   + IVF S       L +  M S+GS+ + ++ +    Y +P WS  
Sbjct: 243 GGLMESSGLDSWYENTIVFNSRSLSGTTLPIVRMDSDGSNMEVLASENNVFYNNPTWSSN 302

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQ 382
           G  I F+  +     + +M  DG +
Sbjct: 303 GAKICFSSDATGVSELYIMNPDGGE 327


>gi|296282776|ref|ZP_06860774.1| peptidase S9, prolyl oligopeptidase active site region
           [Citromicrobium bathyomarinum JL354]
          Length = 710

 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 10/106 (9%)

Query: 310 SPDSSQIVF-------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           SPD SQI +        SD        V    G ++    QD  A  F P WSP GD +A
Sbjct: 71  SPDGSQIAYVRQSNDVMSDSTRSAIWLVDARTGEEKPVAGQDGNA--FSPRWSPSGDRLA 128

Query: 363 FTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFS 407
           F   +G    + V   DG +  RL    ++  +  WSP GRS+ ++
Sbjct: 129 FVSTNGGSAQLWVRWMDGGEAVRLTGLPTSPSSMAWSPDGRSIAYT 174


>gi|83816557|ref|YP_445077.1| acylaminoacyl-peptidase [Salinibacter ruber DSM 13855]
 gi|83757951|gb|ABC46064.1| acylaminoacyl-peptidase [Salinibacter ruber DSM 13855]
          Length = 839

 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 1/84 (1%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQE 383
           + +LYV +++G D  R+    E     P W P G  +AF +  +G      +    G   
Sbjct: 29  RARLYVARTSGRDDPRLLFQDEHDIRAPAWHPDGTHLAFVRPVNGTPQVFVIPLNGGVPY 88

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFS 407
           RL       QAP W P G  L+F+
Sbjct: 89  RLTDTPHGAQAPQWGPDGERLLFA 112



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 12/98 (12%)

Query: 355 SPQGDLIAFT-------KFSGEKFAIGVMKKDGSQE-RLLVEDSN-LQAPTWSPSGRSLI 405
           SP+G  +A+T       +    +  + V +  G  + RLL +D + ++AP W P G  L 
Sbjct: 7   SPRGRSVAYTVRRLSPGQAPAPRARLYVARTSGRDDPRLLFQDEHDIRAPAWHPDGTHLA 66

Query: 406 FSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQW 442
           F R  +G    +++ I LNG     L +TP  A  PQW
Sbjct: 67  FVRPVNGT--PQVFVIPLNGGVPYRLTDTPHGAQAPQW 102


>gi|162453807|ref|YP_001616174.1| hypothetical protein sce5531 [Sorangium cellulosum 'So ce 56']
 gi|161164389|emb|CAN95694.1| hypothetical protein sce5531 [Sorangium cellulosum 'So ce 56']
          Length = 458

 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 71/137 (51%), Gaps = 13/137 (9%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           T+DD       L +   ++ P R+   + + LA     +G+ A +      + D++++DL
Sbjct: 92  TFDDWVKEYSGLGEPEAEKRPPRLRRAKELALA-----SGRIAFM-----RSGDVFAMDL 141

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEAS 348
            +    +LT     NI+ ++  D  +I F S+R+G   ++++M ++G++Q+ I+    A 
Sbjct: 142 ATGVEAQLTRKTQRNIAPTFLGDGRRIAFLSNRDGMAWRVFLMNADGTEQRPITGKFSAW 201

Query: 349 YFDPVW--SPQGDLIAF 363
           Y +P +  SP G  +A+
Sbjct: 202 YGEPSFAISPDGARVAY 218


>gi|116620656|ref|YP_822812.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223818|gb|ABJ82527.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 672

 Score = 45.8 bits (107), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 6/89 (6%)

Query: 260 ILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I  P+ S +GK     VQ        +   I+ V L     +++T+    N    +SPDS
Sbjct: 32  IADPQISPDGKWVAFQVQTVDVPGNKKPAQIWIVPLNGGTPQQITHDGEANQRPRWSPDS 91

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +I + SDR G  Q+++M  +G + K+++
Sbjct: 92  KRIAYVSDRGGSSQIWMMDPDGGNAKQVT 120



 Score = 36.6 bits (83), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 59/131 (45%), Gaps = 14/131 (10%)

Query: 310 SPDSSQIVFES---DREGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD   + F+    D  G +   Q++++  NG   ++I+ D EA+   P WSP    IA+
Sbjct: 38  SPDGKWVAFQVQTVDVPGNKKPAQIWIVPLNGGTPQQITHDGEANQ-RPRWSPDSKRIAY 96

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               G    I +M  DG   + + +  +       S  G++++F+ +   + G+      
Sbjct: 97  VSDRGGSSQIWMMDPDGGNAKQVTDVVTEADGHVLSGDGKNVVFTSEVFPECGAD----- 151

Query: 423 LNGRNETLINT 433
            N  N+ LI+ 
Sbjct: 152 -NACNQKLIDA 161


>gi|290955378|ref|YP_003486560.1| hypothetical protein SCAB_8041 [Streptomyces scabiei 87.22]
 gi|260644904|emb|CBG67990.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 1070

 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFS 407
           P  SP GDL+AF  + G  F +  M+ DGS+ +   +   + +AP WSP G  L F 
Sbjct: 99  PTHSPDGDLVAFCAYQGGGFHLWTMRPDGSELKRRTDGPWDDRAPAWSPDGTRLAFC 155



 Score = 40.0 bits (92), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 7/101 (6%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           P  SP G  +AF   +    A     +   + R       L AP W+P GRSL+++  +D
Sbjct: 367 PALSPDGRSVAFAALNALWLARTAGGRPPRRLRQSPPTRWLLAPAWAPDGRSLVYADDRD 426

Query: 412 GDTGSKLYSIDLNGRNETLINT-----PAYASDPQWVGFMD 447
           G  G  +Y  DL    ET + T     PA + D + +  +D
Sbjct: 427 GLLG--VYRHDLATGEETALATGGRVMPALSPDGRRLACLD 465


>gi|325281418|ref|YP_004253960.1| peptidase S41 [Odoribacter splanchnicus DSM 20712]
 gi|324313227|gb|ADY33780.1| peptidase S41 [Odoribacter splanchnicus DSM 20712]
          Length = 1072

 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 38/218 (17%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           I+D+I Q I        ++I F+S+     I+  +L V +      R LT ++D  +  P
Sbjct: 213 ITDEIRQDIIPMWSADGNKIYFISDR--DDIM--NLYVYNLSDKTTRQLTFNKDYDIKFP 268

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRA---PKRI---------------GNFRSM 259
               +Q       Y+   IL  Y  DTR ++A   P  I               G    M
Sbjct: 269 ALGGDQ-----IVYEQGGIL--YKFDTRTEKASPIPVEIDNDQNWARPEWKDVSGQISRM 321

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVF 318
            +AP    NG+R +++ + D    I+++  +S  T  LTN+   N  +  +SPD   I +
Sbjct: 322 DVAP----NGERVVVAARGD----IFTLPAKSGITYNLTNSSNANDRNPQWSPDGKWIAY 373

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            SD+ G+  +++  +   ++K +++D +   FD  W+P
Sbjct: 374 ISDKNGEFNIWLRDAFTGEEKMLTKDLKTYIFDLKWAP 411



 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 18/154 (11%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NGK+ + S     A D+Y+V  Q     +LT+ +   +    SPD   I F    +G  +
Sbjct: 31  NGKQIVFSY----AGDLYTVSDQGGTARKLTSDIGYEMFPRISPDGKYIAFTGQYDGNTE 86

Query: 328 LYVMQSNGSDQKRIS------QDKEASYFDP-----VWSPQGDLIAF--TKFSGEKFAIG 374
           ++V+ S G   +R++      +D       P      W+P    I F   +F+   F   
Sbjct: 87  VFVIPSAGGIPRRLTYTATLNRDDLGDRMGPNNIVIGWTPDSKHILFRTRQFTFNDFTGQ 146

Query: 375 VMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +M       E + +   N    ++SP G+ L ++
Sbjct: 147 LMTVPAEGGEAVEIPLKNGGFASYSPDGKKLAYN 180


>gi|189463380|ref|ZP_03012165.1| hypothetical protein BACCOP_04097 [Bacteroides coprocola DSM 17136]
 gi|189429809|gb|EDU98793.1| hypothetical protein BACCOP_04097 [Bacteroides coprocola DSM 17136]
          Length = 708

 Score = 45.8 bits (107), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 10/146 (6%)

Query: 306 SASYSPDSSQIVFE----SDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S+S SPD  QI +     S +E K    +YVM ++G++   ++   + S  +P W   G 
Sbjct: 59  SSSVSPDGKQIAYTVSYYSVKENKSHTVIYVMNADGTNNLLLTHTAD-SEVEPTWIKDGS 117

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF-SRKKDGDTGSK 417
            IAF   +     I  M  DGS+ + L   +  ++   +SP    ++F S+ K G   S 
Sbjct: 118 KIAFLTAASGSMQIWEMNPDGSERKQLSSYEGGIEGFKFSPDESKVLFISQVKYGQRTSD 177

Query: 418 LYSIDLNGRNETLINTPAYASDPQWV 443
           +Y  DL+  +  +IN   Y    +WV
Sbjct: 178 IYP-DLDKASGKVINDLMYKHWDEWV 202


>gi|94969743|ref|YP_591791.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551793|gb|ABF41717.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 919

 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 4/122 (3%)

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           Q  + ERLTN+  ++   S SPD   +V++    GK  L++ Q   S   ++  D +  Y
Sbjct: 379 QQMSIERLTNSGRVDGGTSISPDGKYVVYQMIEGGKSSLWLRQIVTSSSVKLLPDSDIGY 438

Query: 350 FDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFS 407
               +SP G+ + FT+ + +   ++ V+   G   + + +  N+  P  +SP G+   F 
Sbjct: 439 GPTTFSPDGNFVYFTQQNSDAPDSLYVVPTLGGTPKKIFD--NINGPIAFSPDGKQFAFV 496

Query: 408 RK 409
           R+
Sbjct: 497 RE 498



 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 2/115 (1%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           ++++Q     +I+  DL  +  ++LT    I  +   +  S +I + SD  G   ++V  
Sbjct: 642 IVTIQNAITSNIFVSDLNGSNAKQLTQDQ-IAGTQGVAGGSGKIAYNSDASGTSSMWVTD 700

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            NG     +S  K+ +   P  SP G  +A+      K  I V   DG+  R L 
Sbjct: 701 ENGGTPVLVSPPKDFTQ-TPTMSPDGKHVAYLCLHDNKLNIWVADTDGNNIRALT 754


>gi|313159781|gb|EFR59137.1| peptidase, S9A/B/C family, catalytic domain protein [Alistipes sp.
           HGB5]
          Length = 710

 Score = 45.4 bits (106), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 10/97 (10%)

Query: 271 RALISVQKDEAM-------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R L+  Q D  M        I+  DL + A  RLT+T   N    +S D  +I F SDR 
Sbjct: 63  RTLLYAQTDYNMAENRGVTTIWVEDLATKAVTRLTDTASNNADPKWSADGEKIYFLSDRS 122

Query: 324 GKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGD 359
           G  Q++ M   G + +++S  DK+   F    SP+GD
Sbjct: 123 GSMQVWEMTPAGGNARQLSAFDKDVEGFGI--SPRGD 157


>gi|71281981|ref|YP_270182.1| putative transcriptional regulator [Colwellia psychrerythraea 34H]
 gi|71147721|gb|AAZ28194.1| putative transcriptional regulator [Colwellia psychrerythraea 34H]
          Length = 712

 Score = 45.4 bits (106), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 10/133 (7%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSG 368
           SPD SQ+ +     GK   Y+   N SD  ++S          PVWSP    IAF  +  
Sbjct: 195 SPDLSQLAYTKVVRGKPS-YINIENLSDHSKMSVSHPRGKLSRPVWSPTESKIAFL-YQH 252

Query: 369 EKFAI-------GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           ++  I        +  KD  QE       +     +SP G+ L F+ ++    G +++ +
Sbjct: 253 KQVCIIFLAEQKEIKNKDNWQEITECSGESWPHLVFSPDGQYLYFNDRQSKANGYQIFRV 312

Query: 422 DLNGRNETLINTP 434
           DL  + + +IN P
Sbjct: 313 DLLNKQKDIINQP 325


>gi|281420434|ref|ZP_06251433.1| prolyl oligopeptidase family protein [Prevotella copri DSM 18205]
 gi|281405579|gb|EFB36259.1| prolyl oligopeptidase family protein [Prevotella copri DSM 18205]
          Length = 720

 Score = 45.4 bits (106), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 12/111 (10%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            A  SP+  Q+V++       + +G + L++M +NG +QK ++ D + S  D  W   G 
Sbjct: 49  GAEASPNGKQVVYQVGYYSVKENKGHQMLFIMDANGKNQKALTTDAK-SETDAAWIQGGQ 107

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRK 409
            IAF +  G+ ++   M  DG+  + L  D   +Q   +SP G+ +I  ++
Sbjct: 108 KIAFIR-DGQLWS---MNPDGTGRKQLTNDKLGIQGFRFSPDGKKVILIKE 154


>gi|226226684|ref|YP_002760790.1| hypothetical protein GAU_1278 [Gemmatimonas aurantiaca T-27]
 gi|226089875|dbj|BAH38320.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 441

 Score = 45.4 bits (106), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 49/187 (26%), Positives = 87/187 (46%), Gaps = 28/187 (14%)

Query: 283 DIYSVDLQSNATERLTNT---LFINISASYSP----DSSQIVFESD-REGK----EQLYV 330
           DIY ++L  +   RLT          S ++SP     + ++ +  + R+G      +L  
Sbjct: 246 DIYVMNLDGSNLTRLTAAERGRMSYASPAWSPRRIDGAYRLAYAREQRDGDGYAVSRLES 305

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGS----QERL 385
           M+++G+    ++ D   S  +P WSP G  +AF  + +  +  +  ++ DG      E  
Sbjct: 306 MRADGTAMLALTIDTTGSDTEPAWSPDGARVAFVRRGAAARGDLWAVQLDGHARPVAEHA 365

Query: 386 LVE---DSNLQAPTWSPSGRSLIFSRKKD--GD-TGSKLYSIDLNG---RNETLINTPAY 436
           L+E   D   +AP+WSP G+ L F    +  GD    ++YS+D +G   R  T +     
Sbjct: 366 LLENELDDVQRAPSWSPDGKRLAFISAHEILGDFYNWQVYSVDASGTDLRRHTSVAR--E 423

Query: 437 ASDPQWV 443
            ++P WV
Sbjct: 424 HANPVWV 430


>gi|222480106|ref|YP_002566343.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halorubrum lacusprofundi ATCC 49239]
 gi|222453008|gb|ACM57273.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halorubrum lacusprofundi ATCC 49239]
          Length = 633

 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDR 322
           S +G+  L+   +D  M++Y  DLQS+ T +LT+      +   +PD  +I +   E+D 
Sbjct: 117 SEDGETLLLGSSRDGQMNLYRHDLQSDETTKLTDYERAVAAGELAPDGDRIAYATNETDA 176

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLI 361
                +YV  ++GS+ + +      +   P+ W P GD +
Sbjct: 177 YENLDVYVADADGSNPRNLDIGDVGAEAAPIDWGPDGDRL 216



 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/88 (27%), Positives = 45/88 (51%), Gaps = 12/88 (13%)

Query: 352 PVWSPQGDLIA-FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-------TWSPSGRS 403
           P  SP G+ +A +   +G      +  +DG++E+L    S+ + P        W PSG  
Sbjct: 22  PRVSPDGETVALYYDVTGRNELHLLDPRDGNREQL----SDGEVPRSVRAGFEWDPSGDR 77

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           L + R +DGD    ++++ L+G +E ++
Sbjct: 78  LFYHRDEDGDEQHDVWAMSLDGESEPIV 105



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 12/125 (9%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-----SYFDPVWSPQGDL 360
           S   SPD   +    D  G+ +L+++     +++++S D E      + F+  W P GD 
Sbjct: 21  SPRVSPDGETVALYYDVTGRNELHLLDPRDGNREQLS-DGEVPRSVRAGFE--WDPSGDR 77

Query: 361 IAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           + + +     E+  +  M  DG  E ++  D  L+  + S  G +L+    +DG     L
Sbjct: 78  LFYHRDEDGDEQHDVWAMSLDGESEPIVEMDGQLRLHSVSEDGETLLLGSSRDGQM--NL 135

Query: 419 YSIDL 423
           Y  DL
Sbjct: 136 YRHDL 140


>gi|291615637|ref|YP_003518379.1| YidR [Pantoea ananatis LMG 20103]
 gi|291150667|gb|ADD75251.1| YidR [Pantoea ananatis LMG 20103]
          Length = 428

 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 11/109 (10%)

Query: 310 SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD S+I F  +D +   QL+V+  NG +  ++++   +      W P+G+ IAF     
Sbjct: 315 SPDGSKIAFLMADNQQVIQLWVVSPNGGEPHQVTRLTHSIQSAFSWQPRGEAIAFIS--- 371

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-----WSPSGRSLIFSRKKDG 412
           +   +      G  ERL V  S  +AP+     WSP G+ + F R+ +G
Sbjct: 372 DNSVMRCHVVTGECERLTVRSS--EAPSGDAVVWSPDGKQIAFMREIEG 418


>gi|262196288|ref|YP_003267497.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262079635|gb|ACY15604.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1599

 Score = 45.1 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 56/250 (22%), Positives = 112/250 (44%), Gaps = 21/250 (8%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +V+     ++ V + DG+    +  S +  ++   FSP+ +++A A+ D    + V L +
Sbjct: 1154 IVTSSADKTVRVWNGDGSGAPLVVGSHESEVWAAAFSPDGKQIATASQD----VFVRLWN 1209

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                 AP  +      +    F+ +G R+L++   D  + I+ ++  S  T    +   +
Sbjct: 1210 ADGSGAPHVLSGHSGGVRCLDFNPDG-RSLLTASLDGELRIWPLE-GSEFTVLREHEAGV 1267

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            N S S+ PD  Q+   +  +G  +L+     GS   R+    E+   D ++SP G  +  
Sbjct: 1268 N-SISFHPD-GQVFVSASADGTLRLWPADGRGSG--RVLGRHESMATDAMFSPDGRYVVS 1323

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFS------RKKDGDTG 415
            + F G   ++ V + DG    L + D +  + A  +SP G+ ++ +      R  D   G
Sbjct: 1324 SAFDG---SVRVWEVDGDGTTLALRDHDGMVFAAAFSPDGQRIVTTSQDKTARVWDARDG 1380

Query: 416  SKLYSIDLNG 425
             +L  +D +G
Sbjct: 1381 RELLVLDGHG 1390


>gi|171689846|ref|XP_001909863.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944885|emb|CAP70997.1| unnamed protein product [Podospora anserina S mat+]
          Length = 228

 Score = 45.1 bits (105), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 9/171 (5%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           KI  T S    Q++ G  G   S + F    + V SG    ++ + D    +        
Sbjct: 31  KIWDTASGSSTQTLEGHGGSVLS-VAFSPDGQRVASGSSDRTIKIWDTASGSCTQTLEGH 89

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             +++   FSP+ Q+VA  ++D+     + + DT    + + +    S++L+  FS +G+
Sbjct: 90  GDLVWSVAFSPDGQRVASGSHDN----TIKIWDTASGSSTQTLEGHGSLVLSVAFSPDGQ 145

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           R + S   D  + I+      ++T+ L       +S ++SPD  ++   SD
Sbjct: 146 R-VASGSHDNTIKIWDT-ASGSSTQTLEGHGGSVLSVAFSPDGQRVASGSD 194


>gi|162452827|ref|YP_001615194.1| protein kinase [Sorangium cellulosum 'So ce 56']
 gi|161163409|emb|CAN94714.1| Protein kinase [Sorangium cellulosum 'So ce 56']
          Length = 1529

 Score = 45.1 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 59/231 (25%), Positives = 104/231 (45%), Gaps = 28/231 (12%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+ Q++A A++D    +RV+  D   +  P  +    + + A  FS +GKR + +   
Sbjct: 976  FSPDGQRIASASHDR--TVRVWKADGTGE--PLVLRGHDAPVYAVAFSPDGKR-IATGSY 1030

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSD 337
            D    ++S D          +   +    ++SPD  Q+V   SD+  +    V ++NG+ 
Sbjct: 1031 DHTARVWSADGSGEPVVLRGHEHEVQ-GVAFSPDGQQLVTASSDKTAR----VWKANGTG 1085

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +  + +  EA  +   +SP G  I     S +K A  V K DG+ E L++     Q   W
Sbjct: 1086 EPLVLRGHEAPVYSAAFSPDGRRI--VTGSRDKTA-RVWKADGTGEPLVLRGH--QDAVW 1140

Query: 398  ---SPSGRSLIFSRKKDGDTGSKLYSIDLNG------RNETLINTPAYASD 439
               SP G+ +  +     DT  +++S D  G      R+   I + A++ D
Sbjct: 1141 AAFSPDGKRIATASY---DTTVRVWSADGTGEPLVLLRDHEPIASVAFSHD 1188


>gi|21229189|ref|NP_635111.1| hypothetical protein MM_3087 [Methanosarcina mazei Go1]
 gi|20907756|gb|AAM32783.1| hypothetical protein MM_3087 [Methanosarcina mazei Go1]
          Length = 413

 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 8/135 (5%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRIS 342
           ++ +D   N   RL  +  +     + P   ++++ S D +GK  L+V+  +G++Q +++
Sbjct: 169 LWIIDRDGNNRARLGTSENVGTGKDWCPLGLRVIYSSKDSQGKYDLWVIDYHGTNQTQLT 228

Query: 343 QDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWS 398
                SY  ++P +SP G  IA+    G    I +   +G+    L  ++      P WS
Sbjct: 229 N---TSYNEWNPSFSPNGKWIAYVSDEGGSPDIWLRDIEGNYRSRLTNNTGRYDSIPRWS 285

Query: 399 PSGRSLIFSRKKDGD 413
           P G  ++F     G+
Sbjct: 286 PEGSKIMFEGYNPGN 300



 Score = 45.1 bits (105), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 54/117 (46%), Gaps = 1/117 (0%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEA-MDIYSVDLQSNATERLTNTLFINISASYS 310
           R+G   ++     +   G R + S +  +   D++ +D       +LTNT +   + S+S
Sbjct: 181 RLGTSENVGTGKDWCPLGLRVIYSSKDSQGKYDLWVIDYHGTNQTQLTNTSYNEWNPSFS 240

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           P+   I + SD  G   +++    G+ + R++ +       P WSP+G  I F  ++
Sbjct: 241 PNGKWIAYVSDEGGSPDIWLRDIEGNYRSRLTNNTGRYDSIPRWSPEGSKIMFEGYN 297



 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 13/198 (6%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINIS--ASYSPDSSQIV 317
           L+P +S++G+    +V+ + + D  S  +++N +E + T     N++  +  S D   +V
Sbjct: 53  LSPVWSADGEYIFYTVEGNGSNDFKSYRMKANGSEIKRTGIGEGNLTGFSDLSLDGRDLV 112

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVM 376
                  +  LY+          ++ D + S     W   G  I +T+ S G    + ++
Sbjct: 113 IIKSMGSQLDLYLANLENGTVTPVASDSQISEGWGSWCRFGKKITYTQESAGMPPQLWII 172

Query: 377 KKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINT- 433
            +DG+    L    N+     W P G  +I+S  KD      L+ ID +G N+T L NT 
Sbjct: 173 DRDGNNRARLGTSENVGTGKDWCPLGLRVIYS-SKDSQGKYDLWVIDYHGTNQTQLTNTS 231

Query: 434 -----PAYASDPQWVGFM 446
                P+++ + +W+ ++
Sbjct: 232 YNEWNPSFSPNGKWIAYV 249


>gi|294506953|ref|YP_003571011.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Salinibacter
           ruber M8]
 gi|294343281|emb|CBH24059.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Salinibacter
           ruber M8]
          Length = 898

 Score = 45.1 bits (105), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 3/85 (3%)

Query: 325 KEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQ 382
           + +LYV +++G D  R+  QDK     +P W P G  +AF +  +G      +    G  
Sbjct: 88  RARLYVARTSGRDDPRLLFQDKH-DIREPAWHPDGTHLAFVRPVNGTPQVFVIPLNGGVP 146

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFS 407
            RL       QAP W P G  L+F+
Sbjct: 147 YRLTDTPHGAQAPQWGPDGERLLFA 171


>gi|116624825|ref|YP_826981.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227987|gb|ABJ86696.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 886

 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 12/195 (6%)

Query: 254 GNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           GN+ S    P  S +G RA +  +    + DI+ +D+      R T+    +   ++SPD
Sbjct: 609 GNYGS---GPTLSPDGTRAAVDKIDAAGSRDIWVLDIARGVATRSTSDAAQDHGPAWSPD 665

Query: 313 SSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            +++VF S R   G + +Y  +S+G+ ++       +  F   WSP    + ++  +G+K
Sbjct: 666 GTRLVFSSARGAAGTDGIYQRESSGTGKEEPLLQGHSLIFPNGWSPDVRYLLYS-VTGQK 724

Query: 371 FA--IGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               + ++   G+     +E   N +   +SP GR + ++  + G     + S    G  
Sbjct: 725 TGSDLLLLPAAGTPPVPYLEGPYNEKQGQFSPDGRWIAYASDETGSFEVYVQSFP-AGAG 783

Query: 428 ETLINTPAYASDPQW 442
           + L++T A  S P+W
Sbjct: 784 KFLVST-AGGSQPRW 797


>gi|332663301|ref|YP_004446089.1| peptidase S9 prolyl oligopeptidase [Haliscomenobacter hydrossis DSM
           1100]
 gi|332332115|gb|AEE49216.1| peptidase S9 prolyl oligopeptidase [Haliscomenobacter hydrossis DSM
           1100]
          Length = 691

 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 9/112 (8%)

Query: 260 ILAPRFSSNGKRALISV----QKDEAMD--IYSVDLQSNATERLTNTLFINISASYSPDS 313
           I  P  S +GK  + +V     KD + D  I+       A +   +T   + S  +SPD 
Sbjct: 41  IGTPILSPDGKHLVYTVGSTDWKDNSYDTEIWLAREGEEAFQLTRSTKGSSTSPKWSPDG 100

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFT 364
             I F S R  K Q++V++ NG + ++IS +D+    F+  WSP G   A T
Sbjct: 101 KWIAFTSSRNDKSQIFVIRPNGGEAQQISNEDEGVGGFE--WSPDGKQFAIT 150



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 6/104 (5%)

Query: 310 SPDSSQIVFE-SDREGKEQLY----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           SPD   +V+     + K+  Y     +   G +  ++++  + S   P WSP G  IAFT
Sbjct: 47  SPDGKHLVYTVGSTDWKDNSYDTEIWLAREGEEAFQLTRSTKGSSTSPKWSPDGKWIAFT 106

Query: 365 KFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFS 407
               +K  I V++ +G + +++  ED  +    WSP G+    +
Sbjct: 107 SSRNDKSQIFVIRPNGGEAQQISNEDEGVGGFEWSPDGKQFAIT 150


>gi|88803172|ref|ZP_01118698.1| putative peptidase/protease family protein [Polaribacter irgensii
           23-P]
 gi|88780738|gb|EAR11917.1| putative peptidase/protease family protein [Polaribacter irgensii
           23-P]
          Length = 1080

 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 16/142 (11%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++ SPD +QI F      K  LY + S G + ++++      Y   VW+ +G  IAF   
Sbjct: 27  SAISPDGTQIAFTY----KGDLYKVNSKGGNAQQLTFHSAHDY-KAVWNKEGTKIAFASN 81

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFS---------RKKDGDTGS 416
               F I VM   G Q   L   SN + P T+S + + ++F          R+    + S
Sbjct: 82  RYGNFDIYVMNAGGGQATRLTYHSNDEYPYTFSANDQEVLFGALRQDTAEHRQYPHGSQS 141

Query: 417 KLYSIDLN-GRNETLINTPAYA 437
           +LYS+ +  G+   L+  PA A
Sbjct: 142 ELYSVPVTMGKVSQLLTIPAEA 163


>gi|224023742|ref|ZP_03642108.1| hypothetical protein BACCOPRO_00458 [Bacteroides coprophilus DSM
           18228]
 gi|224016964|gb|EEF74976.1| hypothetical protein BACCOPRO_00458 [Bacteroides coprophilus DSM
           18228]
          Length = 1088

 Score = 45.1 bits (105), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D++   ++ N T+++TNT     + S++PD   + + S+REG  Q+Y       D K  +
Sbjct: 337 DVFVTSVEYNTTKQITNTPEQERNLSFAPDGRSLAYSSEREGLWQVYQSSLTNKDDKLFT 396

Query: 343 QDKE----------ASYFDPVWSPQGDLIAF 363
              E          A+ F P +SP G  IAF
Sbjct: 397 YANEIKEERLTNSTAASFQPQYSPDGKEIAF 427



 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 31/60 (51%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V        +LT     +    +SPDS +I F S+R+G   +Y++   G   +R++
Sbjct: 45  DIYTVPANGGKATQLTTNAAHDTHPIWSPDSKKIAFASNRQGSMDIYIIDKEGGTPQRLT 104


>gi|298250552|ref|ZP_06974356.1| hypothetical protein Krac_3234 [Ktedonobacter racemifer DSM 44963]
 gi|297548556|gb|EFH82423.1| hypothetical protein Krac_3234 [Ktedonobacter racemifer DSM 44963]
          Length = 372

 Score = 45.1 bits (105), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 17/195 (8%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           ++LA  +S +GKR + SV  D A+ +++    S  TE            +YSPD   +  
Sbjct: 81  VVLAASWSLDGKR-IASVGFDGAVRVWNA---STGTELWKRAFPGTHEVAYSPDGQYVAV 136

Query: 319 ESDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   G +     +Y++ +       ISQ  +       WSP    IA++  +G    I 
Sbjct: 137 GTYVGGGDAGSGLVYILNAASGQTSFISQKYDHGITGLSWSPDSSAIAYSVENG-TIQIL 195

Query: 375 VMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN------GR 426
            +K +G   ++  L     + A  WSP+G+ L ++    G+   ++ +I +         
Sbjct: 196 DIKTNGRNNKVYRLAASDTVGAVAWSPNGKFLAWAVTTPGNPQVQVINISVGHTMYNYHE 255

Query: 427 NETLINTPAYASDPQ 441
           +  LIN  A++ D Q
Sbjct: 256 HSDLINAIAWSPDSQ 270


>gi|327395903|dbj|BAK13325.1| cytoplasmic protein YidR [Pantoea ananatis AJ13355]
          Length = 417

 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 11/109 (10%)

Query: 310 SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD S+I F  +D     QL+V+  NG +  ++++   +      W P+G+ IAF     
Sbjct: 304 SPDGSKIAFLMADNHQVIQLWVVSPNGGEPHQVTRLTHSIQSAFSWQPRGEAIAFIS--- 360

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-----WSPSGRSLIFSRKKDG 412
           +   +      G  ERL V  S  +AP+     WSP G+ + F R+ +G
Sbjct: 361 DNSVMRCHVVTGECERLTVRSS--EAPSGDAVVWSPDGKQIAFMREIEG 407


>gi|325111049|ref|YP_004272117.1| hypothetical protein Plabr_4524 [Planctomyces brasiliensis DSM
           5305]
 gi|324971317|gb|ADY62095.1| WD40-like beta Propeller containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 339

 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 68/126 (53%), Gaps = 15/126 (11%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           +LT++     + + SPD   IV+ + +  +  + L+ ++ +G ++++++ D + +   P 
Sbjct: 86  QLTDSPAYETAPAVSPDGVWIVYAAGQWPDAADHLFRIRIDGEEKQQLT-DSDGNDTAPA 144

Query: 354 WSPQGDLIAFT-----KFSG------EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSG 401
           +SP G  + F      ++ G      E+  I +M  DGS  R+LV E+ +  AP +S  G
Sbjct: 145 FSPDGKSVVFVRETEYRWGGLASNWTERGMICLMHADGSNLRILVSEELDAFAPAFSADG 204

Query: 402 RSLIFS 407
           RS+I+S
Sbjct: 205 RSIIYS 210


>gi|331695060|ref|YP_004331299.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Pseudonocardia dioxanivorans CB1190]
 gi|326949749|gb|AEA23446.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Pseudonocardia dioxanivorans CB1190]
          Length = 660

 Score = 45.1 bits (105), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 43/199 (21%)

Query: 258 SMILAPRFSSNGKR-ALISVQKDEAMDIYSVDL------QSNATERLTNTLFINISASYS 310
           + I  PR S +G++ A +    D A + Y   +       S+  +  +     +    +S
Sbjct: 10  AQISDPRVSPDGRQVAFVVTHVDMAENTYRSGVWLAAADGSSPPQPFSAGEHGDGQPRWS 69

Query: 311 PDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----- 363
           PD  ++ F S R   E   L+V   +G  + R   ++  +  DP WSP G  IAF     
Sbjct: 70  PDGRRLAFTSRRGTDEHPTLHVAPVDGPGEVRTICERPEAIEDPAWSPDGTRIAFTSRER 129

Query: 364 ---------------------TKFSGEKF------AIGVMKKDGSQERLLVEDS--NLQA 394
                                T+  GE +      ++ V+  DGS    LV     N  A
Sbjct: 130 TARFDEPEEKARPPRRIDRLVTRLDGEGWIVDRPRSVFVVAVDGSGPPTLVAGGPYNHGA 189

Query: 395 PTWSPSGRSLIFSRKKDGD 413
           P+WSP   ++  +  +  D
Sbjct: 190 PSWSPDSATIAVTADRTPD 208



 Score = 37.0 bits (84), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 49/118 (41%), Gaps = 17/118 (14%)

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGV--MKKDGS---QERLL 386
           +D  RI+Q       DP  SP G  +AF       +   +  GV     DGS   Q    
Sbjct: 4   ADIARIAQ-----ISDPRVSPDGRQVAFVVTHVDMAENTYRSGVWLAAADGSSPPQPFSA 58

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE--TLINTPAYASDPQW 442
            E  + Q P WSP GR L F+ ++  D    L+   ++G  E  T+   P    DP W
Sbjct: 59  GEHGDGQ-PRWSPDGRRLAFTSRRGTDEHPTLHVAPVDGPGEVRTICERPEAIEDPAW 115


>gi|294673806|ref|YP_003574422.1| mucin-desulfating sulfatase [Prevotella ruminicola 23]
 gi|294473896|gb|ADE83285.1| mucin-desulfating sulfatase [Prevotella ruminicola 23]
          Length = 1071

 Score = 44.7 bits (104), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 11/92 (11%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y+V        +LT     +    +SPD +++ F S REG   +YVM + GS+  R++
Sbjct: 47  DVYTVAASGGKARQLTTNAAYDACPVWSPDGTKLAFASSREGSMDVYVMDAQGSEPVRLT 106

Query: 343 QD-----------KEASYFDPVWSPQGDLIAF 363
            +            E   F   W P    I F
Sbjct: 107 TNSTDEMPMVWRGNEHVLFSASWMPSAQSILF 138



 Score = 43.9 bits (102), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 20/142 (14%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--- 339
           DI+   ++   T+++TNT     S ++SPD   +V+ ++R G  Q+Y  +    ++K   
Sbjct: 331 DIFVTSVEYKTTKQITNTPQQERSVNFSPDGRSLVYCAERGGVWQIYQTKLKNKNEKLFT 390

Query: 340 --------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                   R++Q  E S   P +SP G  +A+ K   E   I +  K G +  +L    N
Sbjct: 391 YATSLQEERLTQSNETS-LQPQYSPDGKEVAYFKNRAELCVINL--KTGLERTVLDGKYN 447

Query: 392 LQAP------TWSPSGRSLIFS 407
                      WSP  + L+ S
Sbjct: 448 YSYSDGDIWFEWSPDSKWLLAS 469



 Score = 40.0 bits (92), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 26/138 (18%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           SPD   I F      K  +Y + ++G   ++++ +  A+Y   PVWSP G  +AF     
Sbjct: 34  SPDGKTIAFAY----KGDVYTVAASGGKARQLTTN--AAYDACPVWSPDGTKLAFASSRE 87

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-------------TWSPSGRSLIFSRKKDGDTG 415
               + VM   GS+   L  +S  + P             +W PS +S++F  +      
Sbjct: 88  GSMDVYVMDAQGSEPVRLTTNSTDEMPMVWRGNEHVLFSASWMPSAQSILFPGE------ 141

Query: 416 SKLYSIDLNGRNETLINT 433
           +++Y + + G    + +T
Sbjct: 142 NQVYEVSIKGGRPRMFST 159


>gi|170728218|ref|YP_001762244.1| peptidase S41 [Shewanella woodyi ATCC 51908]
 gi|169813565|gb|ACA88149.1| peptidase S41 [Shewanella woodyi ATCC 51908]
          Length = 1079

 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 76/189 (40%), Gaps = 35/189 (18%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A DIY  + Q     R+T+      +   SPD   I F +D EG   +Y++ + G   KR
Sbjct: 39  AGDIYVSNKQGQQVTRITSHAANEYAPHLSPDGQWIAFTADYEGNNDVYIVPATGGQPKR 98

Query: 341 ISQDKEASYFDPV--WSPQGDLIAFT-------KFSGEKFAIGVMKKDGSQERLL---VE 388
           ++        D V  WSP G  + FT         +G+ F++ +  + G   +++   V 
Sbjct: 99  LTWHPGT---DEVRGWSPDGKSVLFTSRRDIAHNRTGQLFSVAI--QGGFPTKVMEAVVS 153

Query: 389 DSNLQAPTWSPSGRSLIFS------------RKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           D  + A      G  L ++            R   G T   ++  DLN  +   +    +
Sbjct: 154 DGKMNA-----DGSKLAYNPERLAHGGKNGWRNHRGGTTPPVWIYDLNKNSYVEVPHGNF 208

Query: 437 A-SDPQWVG 444
           + S P WVG
Sbjct: 209 SDSSPMWVG 217



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 10/127 (7%)

Query: 242 MDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +D ++D  P+R   F+     + + + S+ GK+ L+S + +    ++SV ++  +T  LT
Sbjct: 284 IDIKVD-LPQRRTQFKDAMPSLSSSQISATGKQVLLSARGE----VFSVPVKDGSTYNLT 338

Query: 299 NTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-ASYFDPVWSP 356
           NT   N   A +SP   QI + +D+ G  +L +    G  QK +   K  A ++   W P
Sbjct: 339 NTSGQNERDALWSPLGEQIAYITDKGGDYRLVLADQFGEVQKTLDLGKHTADFYLFSWMP 398

Query: 357 QGDLIAF 363
            G  I F
Sbjct: 399 DGKHIVF 405


>gi|68349584|gb|AAY96687.1| protein kinase/protein beta WD-40 repeat [uncultured bacterium
           BAC10-4]
          Length = 940

 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 20/179 (11%)

Query: 249 APKRIGNFRSMILAPR-FSSNGKRALISV-QKDEAMDIYSVDLQSNATER---LTNTLFI 303
           AP+RI     + L+P   S +G+ A  SV   + + D++  DL++ A  R      T   
Sbjct: 739 APERILTVPGIWLSPSSVSHDGRFATFSVFAMNSSHDVWVADLEARAEPRARPFVATADN 798

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIA 362
             SA+++PD   I + ++  G E +YV +    D+K RIS    A      WS  G  + 
Sbjct: 799 EFSAAFAPDGRAIAYTTNETGDENIYVRRFPEGDRKVRISV---AGGQGAQWSRDGSELF 855

Query: 363 FTKFSGEKFAIGVMKKDG----SQERLLVEDSNLQA----PTW--SPSGRSLIFSRKKD 411
           +    G+  A+ +++KDG     +  +L E   L +    P++  SP  R  + +R+ +
Sbjct: 856 YQSPDGKLMAV-LVRKDGGLSFGEPHVLFEGPYLTSIDIGPSYAVSPDSRRFLMARQSN 913


>gi|325106751|ref|YP_004267819.1| hypothetical protein Plabr_0167 [Planctomyces brasiliensis DSM
           5305]
 gi|324967019|gb|ADY57797.1| hypothetical protein Plabr_0167 [Planctomyces brasiliensis DSM
           5305]
          Length = 335

 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 89/194 (45%), Gaps = 26/194 (13%)

Query: 262 APRFSSNGKRALISVQKDE------------AMDIYSVDLQSNATERLTNTLFINISASY 309
           +P  SS+G + L+ ++  E            + D+Y++D+     +RLT+  +  ISA +
Sbjct: 135 SPSLSSDGSK-LVFIRATELRDYSMGGKIWDSWDVYTIDIDGKNEQRLTSEEYGMISAPF 193

Query: 310 SPDSSQIVFESDREGKEQLYVMQ-SNG--SDQKRISQDKEA-----SYFDPVWSPQGDLI 361
             ++  +VF ++ +G  +L  +   NG  S + +   +K A     S  DP      D +
Sbjct: 194 YLENDTVVFAAEVDGNMKLLTLDLGNGLTSSEVQYVDNKIAGIHGNSQSDPSPYMHSDRL 253

Query: 362 AFT----KFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           AF     K S  ++ I  +   D + +++         PTWSP G+ L +      D   
Sbjct: 254 AFVFSDKKESPFQYEIWSLHLSDNTVQQVTSSGHKNSDPTWSPDGKMLFYLSDPQRDRRF 313

Query: 417 KLYSIDLNGRNETL 430
           ++  ID++G NE++
Sbjct: 314 EIRKIDVDGTNESV 327


>gi|148262153|ref|YP_001228859.1| APHP domain-containing protein [Geobacter uraniireducens Rf4]
 gi|146395653|gb|ABQ24286.1| APHP domain protein [Geobacter uraniireducens Rf4]
          Length = 1951

 Score = 44.7 bits (104), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 49/218 (22%), Positives = 91/218 (41%), Gaps = 22/218 (10%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P ++    K+A   YD     R+ + D    +              P +S++G + + + 
Sbjct: 124 PVWNAAGDKIAMQFYDSRGNDRIAVFDVHTVKMTPLTAGLYVYEQTPAWSADGTKVIFTS 183

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP----DSSQIVFESDREGKEQLYVMQ 332
            K+   +I+S DL S A  ++T+ +F     +Y+P    D S+I F         L V+ 
Sbjct: 184 NKNGYQEIWSKDLISGAETQVTHGVF-----AYNPKPSQDGSRIAFFD----GSTLKVID 234

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI---GVMKKDGSQERLLVED 389
              +    +    + ++    WS  G  I+F    G  ++I    +M    S+    V  
Sbjct: 235 LQTAVTTLVGTANQNTHN---WSADGKRISFRANKGTGYSIFSYDLMTGQTSEVAASVHY 291

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           S +  P+WSP G  ++F++ + G  G  L +  L G +
Sbjct: 292 SII--PSWSPDGSEILFAKAEPGG-GYALLASTLTGES 326



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 41/146 (28%), Positives = 62/146 (42%), Gaps = 18/146 (12%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDLI 361
           S S+S   S I F  D  G    Y + +N   +K +S   E     S  +PVW+  GD I
Sbjct: 77  SKSFSFSGSDIAFSLD--GTSAAYTLFNN-VYEKNLSTGVETLLAESARNPVWNAAGDKI 133

Query: 362 AFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           A   +          F +  +K       L V +   Q P WS  G  +IF+  K+G   
Sbjct: 134 AMQFYDSRGNDRIAVFDVHTVKMTPLTAGLYVYE---QTPAWSADGTKVIFTSNKNGY-- 188

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQ 441
            +++S DL    ET +    +A +P+
Sbjct: 189 QEIWSKDLISGAETQVTHGVFAYNPK 214


>gi|1335976|gb|AAB01192.1| apical gut membrane polyprotein [Haemonchus contortus]
          Length = 822

 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 77/172 (44%), Gaps = 27/172 (15%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +GK+ + + ++   +D++  D+      +LT     +  AS+SPD  +IVF + R   
Sbjct: 183 SPDGKKIVYTSKQSGDLDLWITDINGALKIQLTKAKGYDGGASFSPDGEKIVFHASRPTT 242

Query: 326 E--------------------QLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFT 364
           +                    +LYVM ++G D++ +  Q +    + P + P    I F+
Sbjct: 243 KDKIDIYDHLLENDLVAMSEMELYVMNADGIDKRSVFKQPRGGLNWTPYYHPDNKRIIFS 302

Query: 365 KFSG----EKFAIGVMKKDGSQ-ERLLVEDSNLQA-PTWSPSGRSLIFSRKK 410
             +      +F + ++ +DG+  ER+        A P +S  G+ +++S  +
Sbjct: 303 SNTNSTKPSEFHLYIVNEDGTGLERVTFGSGYFNAFPVFSHDGKKVVWSSNR 354



 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DI+ V+   N  ++LT+    N  A  SPD   I F S R G  +L+ M ++G++  ++
Sbjct: 553 FDIFMVNKYGNIVKQLTDEPGYNAEAVLSPDGKTIAFTSIRTGDLELWTMNTDGTNLHQV 612

Query: 342 SQDKEASYFDPV-WSPQGDLIAF 363
           +  KE  Y     +SP G  + F
Sbjct: 613 T--KEYGYDGGCFFSPDGKRLVF 633


>gi|109898138|ref|YP_661393.1| peptidase S9, prolyl oligopeptidase active site region
           [Pseudoalteromonas atlantica T6c]
 gi|109700419|gb|ABG40339.1| peptidase S9, prolyl oligopeptidase active site region
           [Pseudoalteromonas atlantica T6c]
          Length = 692

 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 79/163 (48%), Gaps = 11/163 (6%)

Query: 271 RALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           R  + +Q D+   +I+ VD ++N    +TN L  + S + SPD S++ + S   G  Q++
Sbjct: 60  RNYMDIQNDKKRGNIWKVD-KNNVMTPVTNGLHADFSPTLSPDESKLAYISTASGSAQIH 118

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVM-KKDGSQ---E 383
           +   N     +++     S  +  WSP G ++AF++F     K  + +  K +G++    
Sbjct: 119 IKWLNTGQTGQMTH-LTGSPSNLSWSPDGKMLAFSQFVKGTPKSPVNLSGKPEGAKWADS 177

Query: 384 RLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            + ++D   +A    + P+G + IF    DG T  +L   + N
Sbjct: 178 AIFIDDLFYRADGAGYIPAGNNQIFVLSADGGTPRQLTQGEFN 220


>gi|269837019|ref|YP_003319247.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269786282|gb|ACZ38425.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 665

 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 6/108 (5%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           + D    I+ V +      R T+    +    +SPD S+I F S+R GK Q++++  +G 
Sbjct: 45  KNDYRSSIFVVPVDGGTPRRFTSADARDSFPRWSPDGSRIAFLSNRTGKSQVWMISVDGG 104

Query: 337 DQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +  +++   E  +YF   WSP G  +A      +  A  + K++G +E
Sbjct: 105 EATQVTDLPEGVTYF--AWSPDGSTLALVS---KTEAAQLEKREGDEE 147


>gi|209966436|ref|YP_002299351.1| acylaminoacyl peptidase, putative [Rhodospirillum centenum SW]
 gi|209959902|gb|ACJ00539.1| acylaminoacyl peptidase, putative [Rhodospirillum centenum SW]
          Length = 710

 Score = 44.7 bits (104), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 81/194 (41%), Gaps = 26/194 (13%)

Query: 263 PRFSSNGK-----RALISVQKDEAMD-IYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P+ S +GK     R  + + KD A+  ++ VD +  +   L         A +SPD  +I
Sbjct: 54  PQISPDGKQIVYARVGMDIMKDRAVPTLWVVDHEGRSHRPLLPGRVPASLARWSPDGGRI 113

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---VWSPQGDLIAFT---KFSGEK 370
            +     G+ Q++V   +      ++   E    DP    WSP G  +AFT   K  G+ 
Sbjct: 114 AYVQAEGGQRQIHVRWMDTGQTATVTHLTE----DPDNLAWSPDGRWLAFTMLVKAEGKP 169

Query: 371 FAIGVMKKDGSQ--ERLLVEDSNL---QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                 K DG++   ++ V DS +       +   GR  +F    +G T  +L S D + 
Sbjct: 170 LGTMPPKPDGAEWAPKVKVVDSMVYRADGAGFLEQGRHHLFVVPAEGGTPRQLTSGDFDH 229

Query: 426 RNETLINTPAYASD 439
           R +     PA+  D
Sbjct: 230 RGQ-----PAWLPD 238



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 75/163 (46%), Gaps = 20/163 (12%)

Query: 284 IYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV--------FESDREGKEQLYVMQSN 334
           ++ V  +     +LT+  F +    ++ PD S I+        +E+D   ++   V   +
Sbjct: 209 LFVVPAEGGTPRQLTSGDFDHRGQPAWLPDGSAIIIAANRNPDWETDPLNQDLHEVSVKD 268

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE- 388
           G+ +   ++    S  DP  SP G  IAFT F  ++       + V+ +   + R L E 
Sbjct: 269 GTIRTLTTRKGPDS--DPAVSPDGRYIAFTGFEDQRRGYHNSRLSVLDRRTGEIRTLTEG 326

Query: 389 -DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            D ++ AP W+  G++++ S +  G+    L  I L+GR E L
Sbjct: 327 LDRSVDAPAWTDEGKAILVSYEDRGNM--VLARIGLDGRREVL 367


>gi|218128507|ref|ZP_03457311.1| hypothetical protein BACEGG_00077 [Bacteroides eggerthii DSM 20697]
 gi|217989398|gb|EEC55711.1| hypothetical protein BACEGG_00077 [Bacteroides eggerthii DSM 20697]
          Length = 1086

 Score = 44.7 bits (104), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 14/109 (12%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S NGK     ++ D    +Y   +    T+++TNT        ++PD   +V+ S+R G
Sbjct: 322 LSPNGKEVAFVLRGD----VYVTSVDYKTTKQVTNTPCQERGVDFAPDGRSLVYASERGG 377

Query: 325 KEQLYVMQSNGSDQKRIS----------QDKEASYFDPVWSPQGDLIAF 363
             QLY       D+K  +           + EA+ F P +SP G  +AF
Sbjct: 378 LWQLYTSAIVRKDEKLFTYATELKEERLTNSEAASFQPQYSPDGKEVAF 426



 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 31/60 (51%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V +      +LT     +    +SPD  +I F SDR G   +Y++   G + +R++
Sbjct: 45  DIYTVPVDGGRAMQLTTNPAHDTEPVWSPDGKRIAFASDRMGSMDVYIVSKEGGEPRRLT 104



 Score = 40.4 bits (93), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 18/125 (14%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + SPD + I F      K  +Y +  +G    +++ +  A   +PVWSP G  IAF   
Sbjct: 29  CAISPDGTTIAFTY----KGDIYTVPVDGGRAMQLTTNP-AHDTEPVWSPDGKRIAFASD 83

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 + ++ K+G + R L   S  + P        + FS     D G  L+S D+   
Sbjct: 84  RMGSMDVYIVSKEGGEPRRLTTHSGSETP--------VAFS-----DAGHILFSADIMPS 130

Query: 427 NETLI 431
            ET++
Sbjct: 131 AETVL 135



 Score = 36.6 bits (83), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 25/122 (20%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALI 274
           E   SPN ++VA+       +LR  +  T +D +  K++ N         F+ +G+  + 
Sbjct: 319 EMALSPNGKEVAF-------VLRGDVYVTSVDYKTTKQVTNTPCQERGVDFAPDGRSLVY 371

Query: 275 S--------------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +              V+KDE +  Y+ +L+    ERLTN+   +    YSPD  ++ F  
Sbjct: 372 ASERGGLWQLYTSAIVRKDEKLFTYATELKE---ERLTNSEAASFQPQYSPDGKEVAFLE 428

Query: 321 DR 322
           +R
Sbjct: 429 NR 430


>gi|271965515|ref|YP_003339711.1| hypothetical protein Sros_4060 [Streptosporangium roseum DSM 43021]
 gi|270508690|gb|ACZ86968.1| hypothetical protein Sros_4060 [Streptosporangium roseum DSM 43021]
          Length = 1059

 Score = 44.7 bits (104), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 72/173 (41%), Gaps = 18/173 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D++ V +      RLT  +       +SP   Q+ F    EG E++YVM ++G   +RI+
Sbjct: 22  DLWMVPVTGGRAFRLTAGVAEAGYPRFSPCGDQLAFAGREEGPEEVYVMPADGGAARRIT 81

Query: 343 QDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                S     W P G ++  +     F G+K+ +  +  DG  ERL    +N  + ++ 
Sbjct: 82  YHGARSTVT-GWDPDGAVLYASDESQPFEGQKW-LHRIHPDGIPERLPYGPAN--SISYG 137

Query: 399 PS---GRSLI----FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           P    GR+      + R + G  G      +   R   LI  P   + P W G
Sbjct: 138 PQIVLGRNTADPARWKRYRGGTVGDLWIGTEEFRR---LIALPGNLASPCWAG 187


>gi|20090399|ref|NP_616474.1| hypothetical protein MA1540 [Methanosarcina acetivorans C2A]
 gi|19915408|gb|AAM04954.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 618

 Score = 44.7 bits (104), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 47/220 (21%), Positives = 98/220 (44%), Gaps = 23/220 (10%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--DDEDILRVYLMDTRIDRAP 250
           L ++DRDG  ++ LT + D++     +S + +K+AY+    + ++   +++++       
Sbjct: 224 LYLIDRDGYVLQKLTDTSDRVE-TAIWSNDGKKIAYSITGPNKDEETGLWIINENRTEDN 282

Query: 251 KRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           + + N   +  +P     F  +    L S++ D   ++      S    R+ + L     
Sbjct: 283 RLVDNGIVIAWSPDDSRIFYVDANSGLYSIKADGTDEVQ----LSTGFSRIDDVL----- 333

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD   ++F +  +    +++    G + K + +      F P WSP+GD IA  + 
Sbjct: 334 -SFSPDGKNLIFSTVNDEGVTMFLADQTGKNAKVLEEFPGYIIFKPSWSPKGDKIAHAQD 392

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                 +  +  DGS++ L+   S +    W PSG  + F
Sbjct: 393 DN----LYTINPDGSEKSLIA--SAITDYEWHPSGDFISF 426


>gi|325300410|ref|YP_004260327.1| peptidase S41 [Bacteroides salanitronis DSM 18170]
 gi|324319963|gb|ADY37854.1| peptidase S41 [Bacteroides salanitronis DSM 18170]
          Length = 1083

 Score = 44.7 bits (104), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 32/60 (53%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V  Q     +LT     +    +SPD +++ F S REG   +YV+  +G   KRI+
Sbjct: 45  DIYTVSAQGGRATQLTTNAAYDTRPVWSPDGTRLAFASSREGSLDVYVISKDGGTPKRIT 104



 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 43/180 (23%), Positives = 68/180 (37%), Gaps = 21/180 (11%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D++        T ++T+T        +SPD   +V+ S+R G  Q+Y       D+K  +
Sbjct: 337 DVFVTSSDYKTTRKITDTPEQERDLDFSPDGRSLVYSSERGGLWQVYQASLTVKDEKLFT 396

Query: 343 ----------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK------DGSQERLL 386
                      D  A+ F P +SP G  +AF +       + +  K      DG  E   
Sbjct: 397 YATGIKEERLTDNTATSFQPQYSPDGKKVAFLENRTTLRVLNLEDKSVCTVMDGKYEYSY 456

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDPQWV 443
            +    Q   WSP  R L+      G   +K   L S   NG    L  +    ++ +WV
Sbjct: 457 SDGD--QWFEWSPDSRWLLSGYIGTGGWNNKDVALASASGNGEIHNLTESGYTDTNAKWV 514


>gi|116626580|ref|YP_828736.1| periplasmic component of the Tol biopolymer transporter-like
           protein [Candidatus Solibacter usitatus Ellin6076]
 gi|116229742|gb|ABJ88451.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 507

 Score = 44.7 bits (104), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 8/112 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GK      Q+D    ++ V +   A +RLT+  + +    YSPD   I F SDR G
Sbjct: 338 WSPDGKWLAFVGQRDGKFTLFRVPVTGGAEQRLTSHGYDD-GPEYSPDGKWIYFNSDRSG 396

Query: 325 KEQLYVMQSNGSD-----QKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEK 370
              ++ M  +G+       +R++ D+   +F P +SP G  ++ F+   G K
Sbjct: 397 GWDIWRMPVDGAGTDDAKAQRVTSDELEDWF-PHFSPNGKWMLVFSFPKGTK 447



 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 4/101 (3%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + Q+++  S+GS   R+      SYF   WSP G  +AF      KF +  +   G  E+
Sbjct: 311 QSQVWLANSDGSG-ARLMTPPAPSYFH-GWSPDGKWLAFVGQRDGKFTLFRVPVTGGAEQ 368

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            L        P +SP G+ + F+  + G  G  ++ + ++G
Sbjct: 369 RLTSHGYDDGPEYSPDGKWIYFNSDRSG--GWDIWRMPVDG 407


>gi|302530195|ref|ZP_07282537.1| predicted protein [Streptomyces sp. AA4]
 gi|302439090|gb|EFL10906.1| predicted protein [Streptomyces sp. AA4]
          Length = 1102

 Score = 44.7 bits (104), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 11/112 (9%)

Query: 308 SYSPDSSQIVF-------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           + SPD S+I +       E DR       V  S+G  ++    + +A+   P WSP G  
Sbjct: 20  ALSPDGSRIAYVVRTADREEDRNVDALWTVGASSGEARQLTRGNADAA---PKWSPDGSR 76

Query: 361 IAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +AF +       + V+  DG + E+L        AP WSP G  + FS   D
Sbjct: 77  LAFLRAQDGPPQVWVLPADGGEAEQLTKLPLGAGAPVWSPDGSKIAFSSAID 128



 Score = 44.3 bits (103), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 56/256 (21%), Positives = 97/256 (37%), Gaps = 49/256 (19%)

Query: 216 EPRFSPNQQKVAYA--TYDDEDILRV-YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +P  SP+  ++AY   T D E+   V  L          R     +   AP++S +G R 
Sbjct: 18  QPALSPDGSRIAYVVRTADREEDRNVDALWTVGASSGEARQLTRGNADAAPKWSPDGSRL 77

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-------------- 318
                +D    ++ +       E+LT       +  +SPD S+I F              
Sbjct: 78  AFLRAQDGPPQVWVLPADGGEAEQLTKLPLGAGAPVWSPDGSKIAFSSAIDLAAVVEAPP 137

Query: 319 ------------ESDREG-----KEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDL 360
                       +SD  G     +  ++V+  + G  Q+    D  A    P WSP G  
Sbjct: 138 ENTPIVAERLDYKSDGPGLLKTLRSHVHVLDVATGEVQQHTFGDWHAG--QPAWSPDGTH 195

Query: 361 IAFTK---------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKK 410
           +AFT          F    + + V +++ ++ RL+  D  +     W+  G++L+   + 
Sbjct: 196 VAFTAALDDDADLTFRSAAYVLDVTERN-AEPRLVGTDQGMAGTVGWTKDGKALLVVGRT 254

Query: 411 DGDTGS-KLYSIDLNG 425
           D  TG   L  + L+G
Sbjct: 255 DTATGHLGLLRVPLDG 270



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 7/97 (7%)

Query: 352 PVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           P  SP G  IA+   + ++       A+  +     + R L   +   AP WSP G  L 
Sbjct: 19  PALSPDGSRIAYVVRTADREEDRNVDALWTVGASSGEARQLTRGNADAAPKWSPDGSRLA 78

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           F R +DG     +   D  G  E L   P  A  P W
Sbjct: 79  FLRAQDGPPQVWVLPAD-GGEAEQLTKLPLGAGAPVW 114


>gi|296331793|ref|ZP_06874260.1| putative acylaminoacyl-peptidase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675817|ref|YP_003867489.1| putative acylaminoacyl-peptidase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151118|gb|EFG92000.1| putative acylaminoacyl-peptidase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414061|gb|ADM39180.1| putative acylaminoacyl-peptidase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 657

 Score = 44.7 bits (104), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 8/118 (6%)

Query: 263 PRFSSNGKRA-LISVQKDEAMDIYSVDL-----QSNATERLTNTLFINISASYSPDSSQI 316
           P+++ +G RA  +  Q ++  D Y+ ++     +S  +   T+         +SPD   +
Sbjct: 19  PQYAPDGSRAAYVQSQVNQEKDSYTSNIWVYETKSGGSVPWTHGEKRCTDPRWSPDGRTL 78

Query: 317 VFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            F SDR+G   QLY+M + G + ++++ D       P+WSP G+ +      GE  +I
Sbjct: 79  AFISDRDGDAAQLYIMSAEGGEARKLT-DIPYGVSKPIWSPDGESVLVIVSLGEGESI 135



 Score = 40.0 bits (92), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 23/112 (20%)

Query: 309 YSPDSSQIVFESDREGKEQ--------LYVMQSNGS-----DQKRISQDKEASYFDPVWS 355
           Y+PD S+  +   +  +E+        +Y  +S GS      +KR +        DP WS
Sbjct: 21  YAPDGSRAAYVQSQVNQEKDSYTSNIWVYETKSGGSVPWTHGEKRCT--------DPRWS 72

Query: 356 PQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
           P G  +AF +   G+   + +M  +G + R L +    +  P WSP G S++
Sbjct: 73  PDGRTLAFISDRDGDAAQLYIMSAEGGEARKLTDIPYGVSKPIWSPDGESVL 124



 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 67/152 (44%), Gaps = 16/152 (10%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +PR+SP+ + +A+ +  D D  ++Y+M      A +++ +    +  P +S +G+  L+ 
Sbjct: 68  DPRWSPDGRTLAFISDRDGDAAQLYIMSAEGGEA-RKLTDIPYGVSKPIWSPDGESVLVI 126

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQ 332
           V   E   I       N  E+     F  +     +Y  D   +     R    QL ++ 
Sbjct: 127 VSLGEGESI-------NDREKTEPDSFEPVEVQGLAYKRDGKGLT----RGAYAQLVLVS 175

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + K+++  K A + DP +SP G  + F+
Sbjct: 176 VKSGEVKQLTNHK-ADHGDPAFSPDGKWLVFS 206


>gi|332664564|ref|YP_004447352.1| WD40-like beta Propeller containing protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332333378|gb|AEE50479.1| WD40-like beta Propeller containing protein [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 1022

 Score = 44.7 bits (104), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 13/132 (9%)

Query: 303 INISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEAS---YFD-----P 352
           +NIS S SPD   ++F S+R     +      +NG   K ++    +    +FD      
Sbjct: 294 MNISPSISPDGKYVLFTSERNLFSTDIFLADATNGQIMKTVASTARSGNVDFFDFLESSG 353

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRK 409
            WSP    +A   F   +  + +      +    +  ++LQA   PTWSP G++++ S  
Sbjct: 354 AWSPDSKRVAVVGFKRGRNVLLIKSPFTGKTLDELAPADLQAFSNPTWSPDGKTIVVSGL 413

Query: 410 KDGDTGSKLYSI 421
           K+G T    Y+I
Sbjct: 414 KEGHTDLYAYNI 425



 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 39/178 (21%), Positives = 86/178 (48%), Gaps = 16/178 (8%)

Query: 154 IAHTIS-DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           I+ +IS D  Y   T E+  F++ I     +  +G I  ++    R G N+ +     D 
Sbjct: 296 ISPSISPDGKYVLFTSERNLFSTDIFLADAT--NGQIMKTVASTARSG-NVDFF----DF 348

Query: 213 ILFEPRFSPNQQKVAYATYD-DEDILRV---YLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           +     +SP+ ++VA   +    ++L +   +   T  + AP  +  F +    P +S +
Sbjct: 349 LESSGAWSPDSKRVAVVGFKRGRNVLLIKSPFTGKTLDELAPADLQAFSN----PTWSPD 404

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           GK  ++S  K+   D+Y+ ++++   ++LT+  +  I ++++ D   + F +D++  E
Sbjct: 405 GKTIVVSGLKEGHTDLYAYNIRTRTLKQLTDDKYSEIQSTWAEDGQTLFFSTDQKAWE 462


>gi|162456252|ref|YP_001618619.1| hypothetical protein sce7969 [Sorangium cellulosum 'So ce 56']
 gi|161166834|emb|CAN98139.1| hypothetical protein sce7969 [Sorangium cellulosum 'So ce 56']
          Length = 1017

 Score = 44.7 bits (104), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 2/119 (1%)

Query: 262 APRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +P FS +GKR   SV       DI  VD+ +    ++T     +++  +SPD   + F S
Sbjct: 486 SPSFSPDGKRLAYSVWTAGGYRDIRVVDVATGGFRQVTRDRATDMNPVWSPDGETLYFTS 545

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           DR G   +Y    +    ++++  +  +   P  SP G  + +  ++     +  M  D
Sbjct: 546 DRTGIHNVYAYDVSSGALRQVTNVRLGA-LHPAISPDGKTLVYVGYTSRGHDLFAMPLD 603



 Score = 44.3 bits (103), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 4/142 (2%)

Query: 193 LCVMDRDGA--NIRYLTPS-RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  + RDGA    R L PS R +  + P FSP+ +++AY+ +       + ++D      
Sbjct: 460 IARLSRDGALSERRDLVPSARFEQAYSPSFSPDGKRLAYSVWTAGGYRDIRVVDVATG-G 518

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +++   R+  + P +S +G+    +  +    ++Y+ D+ S A  ++TN     +  + 
Sbjct: 519 FRQVTRDRATDMNPVWSPDGETLYFTSDRTGIHNVYAYDVSSGALRQVTNVRLGALHPAI 578

Query: 310 SPDSSQIVFESDREGKEQLYVM 331
           SPD   +V+         L+ M
Sbjct: 579 SPDGKTLVYVGYTSRGHDLFAM 600


>gi|294672803|ref|YP_003573419.1| mucin-desulfating sulfatase [Prevotella ruminicola 23]
 gi|294472399|gb|ADE81788.1| mucin-desulfating sulfatase [Prevotella ruminicola 23]
          Length = 1080

 Score = 44.7 bits (104), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 23/181 (12%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++Y        T R+T+T  +  + S+SPD   + + S+R G   +Y       D+K+ +
Sbjct: 333 EVYVTATDYKTTRRITDTPELERNLSFSPDGRSLAYASERNGCWNIYQTTIKNKDEKQFT 392

Query: 343 ----------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                       +  + F P +SP    +AF +  G    I +  K   + R +++  +L
Sbjct: 393 YATDLTEEQLTKQNHTSFYPRYSPDSKELAFFEDRGTIRIINLATK---KIRTVMDGKDL 449

Query: 393 QAPT-------WSPSGRSLIFSRKKDGD-TGSKLYSIDLNGRNE--TLINTPAYASDPQW 442
            + +       WSP  R L+ +   DG      +  ID +G+ +   L N+  Y  +P W
Sbjct: 450 FSYSDGDIDFEWSPDSRWLLATYYGDGGYHHDDIALIDASGKQKPYNLTNSSYYDMNPHW 509

Query: 443 V 443
           V
Sbjct: 510 V 510



 Score = 43.1 bits (100), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 35/60 (58%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+++V +     ++LT     + +  +SPD S+I F SDREG   ++VM S G   ++I+
Sbjct: 45  DLFTVPVTGGTAKQLTTNPAYDYNPVWSPDGSKIAFASDREGGINVWVMPSKGGQPQQIT 104



 Score = 37.0 bits (84), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 5/84 (5%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   I F      K  L+ +   G   K+++ +    Y +PVWSP G  IAF      
Sbjct: 32  SPDGQTIAFSY----KGDLFTVPVTGGTAKQLTTNPAYDY-NPVWSPDGSKIAFASDREG 86

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ 393
              + VM   G Q + +   S+ +
Sbjct: 87  GINVWVMPSKGGQPQQITTSSHFK 110


>gi|160890688|ref|ZP_02071691.1| hypothetical protein BACUNI_03133 [Bacteroides uniformis ATCC 8492]
 gi|156859687|gb|EDO53118.1| hypothetical protein BACUNI_03133 [Bacteroides uniformis ATCC 8492]
          Length = 1111

 Score = 44.7 bits (104), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y   ++   T+++TNT     +  ++PD   +V+ S+R G  QLY       D+K  +
Sbjct: 362 DVYVTSVEYKTTKQITNTPCQERTVDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKLFT 421

Query: 343 QDKE----------ASYFDPVWSPQGDLIAF 363
              E          A+ F P +SP G  IAF
Sbjct: 422 YATELKEERLTNSDAASFQPQYSPDGKEIAF 452



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 10/94 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V +      ++T     + +  +SPDS +I F SDR G   +Y++  +G + +R++
Sbjct: 71  DIYTVPVAGGRAMQITTNPAYDTAPVWSPDSKRIAFASDRMGSLDVYIVAKDGGEPRRLT 130

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
               +       +P    +AFT      F+ G+M
Sbjct: 131 THSGSE------TP----LAFTDAGHVLFSAGIM 154


>gi|78777595|ref|YP_393910.1| translocation protein TolB [Sulfurimonas denitrificans DSM 1251]
 gi|78498135|gb|ABB44675.1| putative tonB-independent protein-uptake protein [Sulfurimonas
           denitrificans DSM 1251]
          Length = 417

 Score = 44.7 bits (104), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 132/302 (43%), Gaps = 37/302 (12%)

Query: 124 LRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGD--FNSRILFV 180
           L V+ +L++ K+   +  K +  +S   +  +AHTI+ DI  S  GE        +++F 
Sbjct: 103 LNVDIKLFN-KEGSIVFNKNYKVNSSDIYMFVAHTIAYDI-NSFMGESPIEWIKRKVIFS 160

Query: 181 -------SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                  SE VV+        V+ + G N           LF P+++  +Q   Y T  +
Sbjct: 161 RMLSPQRSELVVTDYTLTYQHVIVKGGFN-----------LF-PKWANKEQSAFYYTSLN 208

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           E    +  +D +  ++ K I +   M++    + +G + L ++  +   DI+  D+++  
Sbjct: 209 ETKPTLKYLDLKTGKS-KVIKSSDGMMICSDINEDGSKLLFTMAPNGQPDIFLYDIKTQN 267

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDP 352
           T++LTN   I++   +  D S ++F SDR G   ++ +   +GS ++ +   K  S    
Sbjct: 268 TKKLTNYGGIDVGGQFMGDDS-VIFVSDRLGYPNVFSLNIKSGSVEQIVYYGKSNS---- 322

Query: 353 VWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
             S  G  + +        FS   F + ++  +    R L      + P +S  G ++IF
Sbjct: 323 ACSVHGKYVVYKARESSDSFSNNTFNLHLVSMESDFVRRLTAVGVNEFPKFSVDGDAVIF 382

Query: 407 SR 408
            +
Sbjct: 383 VK 384


>gi|284106150|ref|ZP_06386248.1| WD40-like Beta Propeller protein [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283830085|gb|EFC34353.1| WD40-like Beta Propeller protein [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 245

 Score = 44.7 bits (104), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 39/165 (23%)

Query: 195 VMDRDGANIR------------YLTPSRDQILF------------EPRFSPNQQKVAYAT 230
           VMD +G NI             Y  P   ++L+            +P+  P  + V    
Sbjct: 86  VMDLEGENIHRVSTGYGTTTCGYFFPGGRRVLYSSTHLAGLQCPPKPKRGPKYRWV---- 141

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            DD DI    L    + R     G      ++P    NG++ + +  +D  +D+Y++++ 
Sbjct: 142 LDDHDIFSARLDGRELQRLTFSPGYDAEATVSP----NGRKVVFTSVRDGDIDLYAMNID 197

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFES-------DREGKEQL 328
               +RLT+ +  +  A YSPDS +IV+ +       +RE  ++L
Sbjct: 198 GTGVKRLTDDVGYDGGAFYSPDSKRIVYRAQHPKTPEEREAYQEL 242


>gi|270295783|ref|ZP_06201983.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270273187|gb|EFA19049.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 1097

 Score = 44.7 bits (104), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y   ++   T+++TNT     +  ++PD   +V+ S+R G  QLY       D+K  +
Sbjct: 348 DVYVTSVEYKTTKQITNTPCQERTVDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKLFT 407

Query: 343 QDKE----------ASYFDPVWSPQGDLIAF 363
              E          A+ F P +SP G  IAF
Sbjct: 408 YATELKEERLTNSDAASFQPQYSPDGKEIAF 438



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 10/94 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V +      ++T     + +  +SPDS +I F SDR G   +Y++  +G + +R++
Sbjct: 57  DIYTVPVAGGRAMQITTNPAYDTAPVWSPDSKRIAFASDRMGSLDVYIVAKDGGEPRRLT 116

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
               +       +P    +AFT      F+ G+M
Sbjct: 117 THSGSE------TP----LAFTDAGHVLFSAGIM 140


>gi|254458984|ref|ZP_05072407.1| protein TolB [Campylobacterales bacterium GD 1]
 gi|207084255|gb|EDZ61544.1| protein TolB [Campylobacterales bacterium GD 1]
          Length = 416

 Score = 44.3 bits (103), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 17/260 (6%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           ++HTI+ DI + +     ++  R +  S  V     K  + + D   A    +      I
Sbjct: 132 VSHTIAYDINEFMGAPSVEWMKRRVIFSRVVAPQ--KTEVVISDYTLAYQHTVVKGGFNI 189

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
              P+++ N Q   Y T  DE    +  +D +  ++ K I +   M++    S NGK+ L
Sbjct: 190 F--PKWANNAQNAFYYTSLDEKKPTLKYVDIKTGKS-KAIISSDGMMICSDVSRNGKKLL 246

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ- 332
           +++      D+Y  D+ +  T++LT    I+++A +  DS  IVF S R G   ++  + 
Sbjct: 247 LTMAPKGQPDVYLYDVDTFKTQQLTTYGGIDVNAQFM-DSETIVFISGRLGYPNVFSKKI 305

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLL 386
            + S ++ +   K  S      S  G+ I +        FS   F + ++       R L
Sbjct: 306 GSNSVEQMVYYGKSNS----ACSTHGEYIVYKARESSNAFSTNTFNLHLISTKTDFIRRL 361

Query: 387 VEDSNLQAPTWSPSGRSLIF 406
                 + P +S  G +++F
Sbjct: 362 TATGVNEFPRFSIDGDAILF 381


>gi|149174001|ref|ZP_01852629.1| probable TolB protein (Precursor) [Planctomyces maris DSM 8797]
 gi|148846981|gb|EDL61316.1| probable TolB protein (Precursor) [Planctomyces maris DSM 8797]
          Length = 309

 Score = 44.3 bits (103), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 71/157 (45%), Gaps = 25/157 (15%)

Query: 306 SASYSPDSSQIVFES--DREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S ++SPD S++  +    +EG+     ++ V  ++GSD K I      S+     SP G+
Sbjct: 62  SPTFSPDGSKLAHDCWKSQEGETFSNVKIMVANADGSDPKIIGAGAMPSF-----SPGGN 116

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            I F++ S    AI  M  DGS  R L+E     A  WSP G+ + +     G    ++Y
Sbjct: 117 RIVFSQPSPSGVAI--MNADGSN-RTLIESGAWGA-QWSPDGKKIAYRAYTSGKANLRIY 172

Query: 420 SIDLNGRNETLI--NTP--------AYASDPQWVGFM 446
            +  + R +      +P        A++ D  WV F+
Sbjct: 173 DLIEDTRFDVFPEGESPYSVISWNMAWSPDSNWVCFL 209


>gi|329889327|ref|ZP_08267670.1| prolyl oligopeptidase family protein [Brevundimonas diminuta ATCC
           11568]
 gi|328844628|gb|EGF94192.1| prolyl oligopeptidase family protein [Brevundimonas diminuta ATCC
           11568]
          Length = 698

 Score = 44.3 bits (103), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 70/174 (40%), Gaps = 40/174 (22%)

Query: 284 IYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++ V  Q     +LT+  F +    S+S DS  +   ++R              D +R +
Sbjct: 211 VFVVGSQGGGARQLTHGDFHHGGGLSWSADSRTLYLSANRR------------PDWQREA 258

Query: 343 QDKEASYFD------------------PVWSPQGDLIAFTKFSGEKFA-----IGVMKKD 379
            D E    D                  PV SP G  IA+  +  ++       + VM  D
Sbjct: 259 ADSEVFALDVQTGGLTALTSRAGPDNAPVASPDGRRIAYLGYDDKRMGYHNTRLYVMDAD 318

Query: 380 GSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           GS  R L E  D ++Q+P WS  GRS+  +    G T  K+  + ++G   TLI
Sbjct: 319 GSNSRALTESLDRSVQSPVWSRDGRSVYVAYDDQGRT--KVARVSMDGAVTTLI 370



 Score = 37.7 bits (86), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 7/86 (8%)

Query: 280 EAMD--IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKE--QLYVMQ 332
           EA D  ++++D+Q+     LT+    + +   SPD  +I +   +  R G    +LYVM 
Sbjct: 257 EAADSEVFALDVQTGGLTALTSRAGPDNAPVASPDGRRIAYLGYDDKRMGYHNTRLYVMD 316

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQG 358
           ++GS+ + +++  + S   PVWS  G
Sbjct: 317 ADGSNSRALTESLDRSVQSPVWSRDG 342


>gi|317479784|ref|ZP_07938904.1| hypothetical protein HMPREF1007_02020 [Bacteroides sp. 4_1_36]
 gi|316903990|gb|EFV25824.1| hypothetical protein HMPREF1007_02020 [Bacteroides sp. 4_1_36]
          Length = 1085

 Score = 44.3 bits (103), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y   ++   T+++TNT     +  ++PD   +V+ S+R G  QLY       D+K  +
Sbjct: 336 DVYVTSVEYKTTKQITNTPCQERTVDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKLFT 395

Query: 343 QDKE----------ASYFDPVWSPQGDLIAF 363
              E          A+ F P +SP G  IAF
Sbjct: 396 YATELKEERLTNSDAASFQPQYSPDGKEIAF 426



 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 10/94 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V +      ++T     + +  +SPDS +I F SDR G   +Y++  +G + +R++
Sbjct: 45  DIYTVPVAGGRAMQITTNPAYDTAPVWSPDSKRIAFASDRMGSLDVYIVAKDGGEPRRLT 104

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
               +       +P    +AFT      F+ G+M
Sbjct: 105 THSGSE------TP----LAFTDAGHVLFSAGIM 128


>gi|326532988|dbj|BAJ89339.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 654

 Score = 44.3 bits (103), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 16/121 (13%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVM-QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           + SP    +VF S R G + LY++  + G +  R   D E     P WSP G+LIAF+  
Sbjct: 458 AVSPCGRWVVFRSGRSGHKNLYIVDAARGEETIRRVTDGEWIDTMPSWSPDGELIAFSSN 517

Query: 367 SGEK-----FAIGVMKKDGSQERLL----------VEDSNLQAPTWSPSGRSLIFSRKKD 411
             E      F+I +++ DG+  R +           +   +    +SP G+ L+F+    
Sbjct: 518 RHEPANAAVFSIYLVRPDGTGLRRVHVAGPAGSAEADKERINHVCFSPDGQWLLFTANLG 577

Query: 412 G 412
           G
Sbjct: 578 G 578


>gi|313681097|ref|YP_004058836.1| peptidase s9 prolyl oligopeptidase active site domain protein
           [Oceanithermus profundus DSM 14977]
 gi|313153812|gb|ADR37663.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Oceanithermus profundus DSM 14977]
          Length = 600

 Score = 44.3 bits (103), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 55/138 (39%), Gaps = 10/138 (7%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT           SPD +++V+    EG++ L V  ++     R+       Y  P WSP
Sbjct: 94  LTPPFGAAADPQPSPDGARVVYVHHHEGRDVLAVAGADPDGWPRVWARGADFYMQPAWSP 153

Query: 357 QGDLIAFTK-------FSGEKFAIGVMKKDGSQE-RLLVEDSNLQA--PTWSPSGRSLIF 406
            G  +A+ +       + G +  +  ++  G  E R L   +      P + P GR L +
Sbjct: 154 DGAWLAWVEWDHPNMPWDGARLMLARVEGGGPAEVRQLAGGARTPVFQPLFDPEGRGLFW 213

Query: 407 SRKKDGDTGSKLYSIDLN 424
               +G    +L  +DL 
Sbjct: 214 IENPEGAEFDRLVRLDLE 231


>gi|308493667|ref|XP_003109023.1| CRE-TAG-10 protein [Caenorhabditis remanei]
 gi|308247580|gb|EFO91532.1| CRE-TAG-10 protein [Caenorhabditis remanei]
          Length = 496

 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + VD   N  +RLT+T   +     SPD ++I F S R G  +LYVM ++GS+  +++ +
Sbjct: 210 FQVDRYGNFVQRLTDTPGYDAEGVVSPDGTKIAFTSIRSGDLELYVMNTDGSNLTQVTNE 269

Query: 345 ---KEASYFDP 352
                 S+F P
Sbjct: 270 LGYDGGSFFTP 280


>gi|188578487|ref|YP_001915416.1| transcriptional regulatory protein, C terminal [Xanthomonas oryzae
           pv. oryzae PXO99A]
 gi|188522939|gb|ACD60884.1| transcriptional regulatory protein, C terminal [Xanthomonas oryzae
           pv. oryzae PXO99A]
          Length = 772

 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 11/222 (4%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRA 272
             P  SP+   VAYA+   +      L+ T  +  P+ +      +    P +S +G+  
Sbjct: 222 LTPSLSPDGAMVAYASLTGDRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGREI 281

Query: 273 LISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQ 327
             S Q  +    + I +    + A E +       +S S+SPD+  ++F S     G  +
Sbjct: 282 AFSRQAPDGSCRVMIAAATGPAAAREVVRCDRADMLSFSWSPDARALLFGSMTGSYGAAR 341

Query: 328 LYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +  +       + ++   +A  FD  P +SP G  I F +         +  + G+ ERL
Sbjct: 342 IRRLNLETGQWQTLNYPAQAGDFDYAPRYSPDGHWIVFLRNPQLGDLWRIPAEGGAAERL 401

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             + +++   +W P G  +IF R+ D +  ++LY +DL  R+
Sbjct: 402 THDTADIWGWSWLPDGSGVIFGRRVDIE--ARLYRLDLLDRS 441



 Score = 40.8 bits (94), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 21/162 (12%)

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQG 358
           +++ S SPD + + + S   DR G   L     N     R+ +       D  P WSP G
Sbjct: 221 DLTPSLSPDGAMVAYASLTGDRTGTSILVKTTDNA--YPRVLETPAPGVSDRLPAWSPDG 278

Query: 359 DLIAFTK----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             IAF++     S             ++E +  + +++ + +WSP  R+L+F        
Sbjct: 279 REIAFSRQAPDGSCRVMIAAATGPAAAREVVRCDRADMLSFSWSPDARALLFGSMTGSYG 338

Query: 415 GSKLYSIDLNGRNETLINTPA----------YASDPQWVGFM 446
            +++  ++L       +N PA          Y+ D  W+ F+
Sbjct: 339 AARIRRLNLETGQWQTLNYPAQAGDFDYAPRYSPDGHWIVFL 380


>gi|292492884|ref|YP_003528323.1| hypothetical protein Nhal_2871 [Nitrosococcus halophilus Nc4]
 gi|291581479|gb|ADE15936.1| WD40 domain protein beta Propeller [Nitrosococcus halophilus Nc4]
          Length = 358

 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 92/231 (39%), Gaps = 46/231 (19%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD DG N+R ++ S   +      +P+ Q + YA+         +L   +    P    +
Sbjct: 87  MDADGKNVRMVS-SGKGVTTCSFIAPDNQSIIYAS--------THLAGEQCPPKP----D 133

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           +    + P +              +  DI+  D + +   RLT+T   +  A YSP   +
Sbjct: 134 YSQGYVWPLY--------------KGYDIFRADPEGDNLVRLTDTPGYDAEAVYSPLGDK 179

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDK---EASYF--DPVW------SPQG------ 358
           I+F S R G  +L+ M  +GS  ++++ +      ++F  D  W       PQG      
Sbjct: 180 IIFTSVRTGDLELFTMNPDGSGVEQLTDEPGYDGGAFFSRDGQWIVWRASRPQGKALEDY 239

Query: 359 -DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFS 407
             L+        +  I +M  +  +   L ++      P W P G+ +IFS
Sbjct: 240 QHLLKQGLIRPGQLEIFIMNLEERKPIQLTDNGAANFGPYWHPDGKHIIFS 290


>gi|225874088|ref|YP_002755547.1| TolB domain protein [Acidobacterium capsulatum ATCC 51196]
 gi|225794563|gb|ACO34653.1| TolB domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 555

 Score = 44.3 bits (103), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 13/120 (10%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTK 365
           A++ PD  +I++ S     + LY+ Q NGSD QK  S    A +    WSP G  + FT 
Sbjct: 121 ATWMPDGQRILYAS----GDNLYIAQLNGSDVQKFASLPGRAFWLR--WSPDGKELRFTL 174

Query: 366 FSGEKFA--IGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + E  +  +  ++ +G+   LL+  +D +    +W+  GR  +F  +K+   GS ++ +
Sbjct: 175 LNSETHSSRLWSIRANGNDAHLLLADDDGSECCGSWTADGRDYVF--QKNASEGSNIWVL 232



 Score = 43.5 bits (101), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 15/140 (10%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------REGKEQLYVMQS 333
            +++ S  LQ +A+ +L    FI  +   S ++S++ F  D       R+    L+  + 
Sbjct: 271 GLNLRSELLQYDASSQL----FIPYAGGIS-NASRVAFSRDGEWVAWFRQDDGSLWRSRR 325

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           NG+++ ++S       F   WSP    LI   +  G+++ I  +  DG   R++  ++  
Sbjct: 326 NGTERLQLSS-GPLDVFMMQWSPDDKKLILMAREPGKRWTIYTLDADGGPLRVVYPENRS 384

Query: 393 QA-PTWSPSGRSLIFSRKKD 411
           QA P WSP G+ ++F R  D
Sbjct: 385 QADPNWSPDGKQIVFGRLPD 404



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 52/121 (42%), Gaps = 12/121 (9%)

Query: 292 NATERL--TNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEAS 348
           N TERL  ++         +SPD  +++  +   GK   +Y + ++G    R+   +  S
Sbjct: 326 NGTERLQLSSGPLDVFMMQWSPDDKKLILMAREPGKRWTIYTLDADGG-PLRVVYPENRS 384

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-----DGSQERL--LVEDSNLQAPTWSPSG 401
             DP WSP G  I F +   +  A   M K     D +   L  L     L +P WSP G
Sbjct: 385 QADPNWSPDGKQIVFGRLP-DLMAEASMPKAIYIYDLASHHLSKLPGSEGLFSPRWSPDG 443

Query: 402 R 402
           R
Sbjct: 444 R 444


>gi|319647634|ref|ZP_08001852.1| YuxL protein [Bacillus sp. BT1B_CT2]
 gi|317389975|gb|EFV70784.1| YuxL protein [Bacillus sp. BT1B_CT2]
          Length = 653

 Score = 44.3 bits (103), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 8/118 (6%)

Query: 260 ILAPRFSSNGKR-ALISVQKDEAMDIYS-----VDLQSNATERLTNTLFINISASYSPDS 313
           I  P++S +G + A +  + +E  D Y       D +  A+ + T     N    +SPD 
Sbjct: 16  ITDPQYSPDGAKIAYVQTKVNEKQDSYDSHIMIYDREKQASVQWTFGKGRNQHPRWSPDG 75

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEK 370
             + F S+RE   Q+YV+ + G + ++++ D       P WSP G  L+   K + E+
Sbjct: 76  KNLAFTSNREETAQIYVISAAGGEARKVT-DIPYDVSQPEWSPDGKTLLCSVKLTKEE 132



 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 20/197 (10%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            PR+SP+ + +A+ T + E+  ++Y++      A +++ +    +  P +S +GK  L S
Sbjct: 68  HPRWSPDGKNLAF-TSNREETAQIYVISAAGGEA-RKVTDIPYDVSQPEWSPDGKTLLCS 125

Query: 276 VQ--KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQ 332
           V+  K+E++D          TE   +      S SY  D         + GK  QL ++Q
Sbjct: 126 VKLTKEESVD------DEKKTEIEDHEPLEVDSLSYKADGQGF-----KRGKYTQLVLVQ 174

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVED 389
               + K+++ D E  +F   +SP GD IAF     +     V   +   G  +RL  ++
Sbjct: 175 VETGEMKQLT-DLERDHFSHAFSPCGDQIAFCANQTDMRVNDVYLMNLSTGDLKRLTGQN 233

Query: 390 SNLQAPTWSPSGRSLIF 406
               + ++SP G+ L F
Sbjct: 234 GIFSSLSFSPDGKHLAF 250



 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 12/110 (10%)

Query: 309 YSPDSSQIVFESDREGKEQ--------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           YSPD ++I +   +  ++Q        +Y  +   S Q    + +      P WSP G  
Sbjct: 21  YSPDGAKIAYVQTKVNEKQDSYDSHIMIYDREKQASVQWTFGKGRNQH---PRWSPDGKN 77

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
           +AFT    E   I V+   G + R + +   ++  P WSP G++L+ S K
Sbjct: 78  LAFTSNREETAQIYVISAAGGEARKVTDIPYDVSQPEWSPDGKTLLCSVK 127


>gi|126652129|ref|ZP_01724311.1| hypothetical protein BB14905_10675 [Bacillus sp. B14905]
 gi|126591037|gb|EAZ85148.1| hypothetical protein BB14905_10675 [Bacillus sp. B14905]
          Length = 701

 Score = 44.3 bits (103), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 5/100 (5%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTK 365
           SPD  Q+V+E     KE  Y      SD     +R+         +P+WSP G  IAF  
Sbjct: 22  SPDGQQVVYERTIAVKENNYETHLYLSDVEGKTRRVLTSSGTRNVNPIWSPDGKTIAFIS 81

Query: 366 FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSL 404
                    ++  DG + R L +    + +  W+P+G+++
Sbjct: 82  DRAYGMQAWLLSLDGGEARCLTKFRQGISSIVWAPNGKTI 121



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 7/82 (8%)

Query: 310 SPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           SPD   IVF S+ E +      ++Y + S+G D K +  D EAS   P +SP G  IAF 
Sbjct: 209 SPDGEYIVFSSNAENENFLFGGKVYRVSSSGGDAKLLYSDTEAS--SPSYSPDGKWIAFF 266

Query: 365 KFSGEKFAIGVMKKDGSQERLL 386
               E+  + V+  +G   R L
Sbjct: 267 GNHAEQKELLVIPSEGGDVRSL 288



 Score = 40.0 bits (92), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 44/237 (18%), Positives = 89/237 (37%), Gaps = 61/237 (25%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +R +   + +    +Y  D++      LT++   N++  +SPD   I F SDR    Q +
Sbjct: 31  ERTIAVKENNYETHLYLSDVEGKTRRVLTSSGTRNVNPIWSPDGKTIAFISDRAYGMQAW 90

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGD-------LIAFTKFS--GEKFAIGVMKKDG 380
           ++  +G + + +++ ++      VW+P G        +I  ++     E   I   K + 
Sbjct: 91  LLSLDGGEARCLTKFRQG-ISSIVWAPNGKTIYGLVPVIVHSELETFHENATIHEAKSEK 149

Query: 381 SQERLLVED------------------------------------------SNLQAPTWS 398
            QE  L  D                                          + +  P  S
Sbjct: 150 EQEDKLWRDGAKRYHHLYYKNDGTGFHKPYKRQIVAIHIDTGTFVLITKGINEVHQPDVS 209

Query: 399 PSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLI------NTPAYASDPQWVGFM 446
           P G  ++FS   + +    G K+Y +  +G +  L+      ++P+Y+ D +W+ F 
Sbjct: 210 PDGEYIVFSSNAENENFLFGGKVYRVSSSGGDAKLLYSDTEASSPSYSPDGKWIAFF 266


>gi|333030832|ref|ZP_08458893.1| peptidase S41 [Bacteroides coprosuis DSM 18011]
 gi|332741429|gb|EGJ71911.1| peptidase S41 [Bacteroides coprosuis DSM 18011]
          Length = 1079

 Score = 44.3 bits (103), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 41/213 (19%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--------FEPRFS 220
           E G FN     V +  + G  K  L  + +    +R+LT S+  +L        +  R  
Sbjct: 235 EDGSFN-----VYKRNLDGSDKKQLTHLKKH--PVRFLTQSKAGVLCFVYDGEIYTLREG 287

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              QKV           R+ ++  + + A K   NFR+       S NGK     ++ D 
Sbjct: 288 AEPQKV-----------RIEIITDQQESAVKHF-NFRTGAKEMSVSPNGKEIAFIIRGD- 334

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              I+   ++   T ++TNT       S+SPD   +++ ++R G   +Y    +  D+K 
Sbjct: 335 ---IFVTSIEYGTTRQITNTPEQERDVSFSPDGRSLLYAAERNGAWNIYQTTLDIKDEKE 391

Query: 341 I----------SQDKEASYFDPVWSPQGDLIAF 363
                        D + + F P++SP G  +AF
Sbjct: 392 FIYAQSFTEEQLTDSDKASFQPLYSPDGKSVAF 424



 Score = 40.4 bits (93), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 12/134 (8%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A+ SPD S+I F      K  +Y + S+G    +++    A    PVWSP G+ IAF   
Sbjct: 29  AAISPDGSEIAFTY----KGDIYKVPSSGGKAIQLTT-HPAHDTQPVWSPDGNKIAFASN 83

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-----KDGD--TGSKLY 419
               F I +M   G     L   S  + P        ++++       KDG   + S++Y
Sbjct: 84  REGGFDIHLMSSRGGAPTRLTTHSANEYPIVFRDNEHVLYTANIMADVKDGHFPSFSQVY 143

Query: 420 SIDLNGRNETLINT 433
            +D  G+   L ++
Sbjct: 144 EVDTEGKRPALFSS 157



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 47/218 (21%), Positives = 93/218 (42%), Gaps = 31/218 (14%)

Query: 219 FSPNQQKVAYA---TYDD-------EDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           F P + K+ Y     Y+D         I R ++L D   +R   ++ NFR     P +++
Sbjct: 165 FHPTENKILYHDKKGYEDPWRKHHQSSIARDIWLCDLNGERTYTKLTNFRGEDRNPTWTA 224

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G       ++D + ++Y  +L  +  ++LT+     +       +  + F  D E    
Sbjct: 225 DGNSFFYLNEEDGSFNVYKRNLDGSDKKQLTHLKKHPVRFLTQSKAGVLCFVYDGE---- 280

Query: 328 LYVMQSNGSDQK-RIS-----QDKEASYF-------DPVWSPQGDLIAFTKFSGEKFAIG 374
           +Y ++     QK RI      Q+    +F       +   SP G  IAF    G+ F   
Sbjct: 281 IYTLREGAEPQKVRIEIITDQQESAVKHFNFRTGAKEMSVSPNGKEIAFI-IRGDIFVTS 339

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           +  + G+  ++       +  ++SP GRSL+++ +++G
Sbjct: 340 I--EYGTTRQITNTPEQERDVSFSPDGRSLLYAAERNG 375



 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 31/67 (46%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V        +LT     +    +SPD ++I F S+REG   +++M S G    R++
Sbjct: 45  DIYKVPSSGGKAIQLTTHPAHDTQPVWSPDGNKIAFASNREGGFDIHLMSSRGGAPTRLT 104

Query: 343 QDKEASY 349
                 Y
Sbjct: 105 THSANEY 111


>gi|262197007|ref|YP_003268216.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262080354|gb|ACY16323.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1617

 Score = 44.3 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 14/144 (9%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            E VVS  + N+  V   DG     +    D  ++   FSP+ ++V  A+ D    +R++ 
Sbjct: 1410 ERVVSSALDNTARVWSADGGGEPLVFTEHDAWVWSASFSPDGERVVTASSDHS--VRIWN 1467

Query: 242  MD----TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             D    TR+      +     ++    FS +G R ++S  KD+ + I+ +D         
Sbjct: 1468 ADGSGETRV------LSGHDEVVSWAEFSPDGDR-VVSASKDKTLRIWPLDGSEPPVVLT 1520

Query: 298  TNTLFINISASYSPDSSQIVFESD 321
             + L++N +A +SPD  ++V  SD
Sbjct: 1521 GHALWVN-TARFSPDGGRVVTASD 1543


>gi|258650574|ref|YP_003199730.1| WD40 domain-containing protein beta Propeller [Nakamurella
           multipartita DSM 44233]
 gi|258553799|gb|ACV76741.1| WD40 domain protein beta Propeller [Nakamurella multipartita DSM
           44233]
          Length = 297

 Score = 44.3 bits (103), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 119/285 (41%), Gaps = 43/285 (15%)

Query: 190 KNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRID 247
           KN L V+D   G  +  LT       + P  SP++  + YA   D  I LR+   D   D
Sbjct: 21  KNDLSVIDTTTGMVVGKLTDGSPGSQY-PTMSPDRSTIVYAQTSDHGIELRMMAADGSGD 79

Query: 248 RAPKRIGNFRSMILA-PRFSSNGKRAL----------ISVQKDEAMDIYSVDLQSNATER 296
           R         S++ A   F  N +R            ++ ++ E  D  ++ +  + T R
Sbjct: 80  R---------SLLAADSEFCPNPQRPAWNPMDTSEIAVACRRGEDPDTLAL-ISVDGTLR 129

Query: 297 LT-NTLFINIS-ASYSPDSSQIVF---ESDREGKEQLYVMQSNGSDQKR--ISQDKEASY 349
            T NT F +    +YSPD   + +   ++       +Y    NGS+  +   S    A+ 
Sbjct: 130 STINTGFPSFDDPTYSPDGKTLAYWASQTPGSTSGAIYTQPVNGSEAPKQITSPGARAND 189

Query: 350 FDPVWSPQGDLIAFTK----FSGEKFA-IGVMKKDGSQERLLVEDSNL-QAPTWSPSGRS 403
            DPVWS  G  I F +     SG+  A I  ++ DGS    + + +     P+ SP G  
Sbjct: 190 VDPVWSVDGKTIYFRRATEDASGQSSAQILRVQADGSGLTPITDGTAFDNDPSVSPDGTQ 249

Query: 404 LIFSRKKD---GDTGSKLYSIDLNGRN--ETLINTPAYASD-PQW 442
           L F   +    G+   +++ I+++G    +  I  P  AS  P+W
Sbjct: 250 LAFFSNRTNAAGNNAGQIWVINVDGTGLRQIGIGKPGTASGPPEW 294



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 14/139 (10%)

Query: 314 SQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +Q++   + + K  L V+ +  G    +++     S + P  SP    I + + S     
Sbjct: 10  TQLIATRNEDDKNDLSVIDTTTGMVVGKLTDGSPGSQY-PTMSPDRSTIVYAQTSDHGIE 68

Query: 373 IGVMKKDGSQER-LLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           + +M  DGS +R LL  DS    N Q P W+P   S I    + G+    L  I ++G  
Sbjct: 69  LRMMAADGSGDRSLLAADSEFCPNPQRPAWNPMDTSEIAVACRRGEDPDTLALISVDGTL 128

Query: 428 ETLINT-------PAYASD 439
            + INT       P Y+ D
Sbjct: 129 RSTINTGFPSFDDPTYSPD 147


>gi|256419972|ref|YP_003120625.1| peptidase S41 [Chitinophaga pinensis DSM 2588]
 gi|256034880|gb|ACU58424.1| peptidase S41 [Chitinophaga pinensis DSM 2588]
          Length = 1075

 Score = 44.3 bits (103), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSR 408
           PVWSP G  IA+   +G ++A+ +  +   +   ++   E S   +P WSP  + ++F+ 
Sbjct: 358 PVWSPDGKSIAYFSDAGGEYALHIRDQKAEKPAQIIPLGETSFFYSPLWSPDSKKILFAD 417

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAY 436
           KK      +LY +D   +  T I+  +Y
Sbjct: 418 KK-----LRLYYVDTESKKVTQIDEDSY 440



 Score = 40.0 bits (92), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 32/67 (47%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A DI++ D      +R+T    + +    SPD   I F  + +G   LYV+  NG   +R
Sbjct: 44  AGDIWTTDENGQHPQRITVNPDVELEPMLSPDGKWIAFSGNYDGNVDLYVVSVNGGIPRR 103

Query: 341 ISQDKEA 347
           I+   +A
Sbjct: 104 ITHHPDA 110



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 18/164 (10%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSP 311
           +G  R++ L+P     G RA +  + D    + +V  +      +T T  ++  A  +SP
Sbjct: 311 VGALRNVNLSP----TGVRAAVEFRGD----VLTVPAEKGNIRNITATPGVHERAPVWSP 362

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEK 370
           D   I + SD  G+  L++         +I    E S+F  P+WSP    I    F+ +K
Sbjct: 363 DGKSIAYFSDAGGEYALHIRDQKAEKPAQIIPLGETSFFYSPLWSPDSKKIL---FADKK 419

Query: 371 FAIGVMKKDGSQERLLVEDS-----NLQAPTWSPSGRSLIFSRK 409
             +  +  +  +   + EDS        +  WSP  R + ++++
Sbjct: 420 LRLYYVDTESKKVTQIDEDSYDRPDQTFSANWSPDSRWITYNKR 463


>gi|134299217|ref|YP_001112713.1| WD40 domain-containing protein [Desulfotomaculum reducens MI-1]
 gi|134051917|gb|ABO49888.1| WD40 domain protein beta Propeller [Desulfotomaculum reducens MI-1]
          Length = 489

 Score = 44.3 bits (103), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 144/338 (42%), Gaps = 61/338 (18%)

Query: 101 QDWNSLGAQVLVTGRVIKEG---KDRLRVEFRLWDVKDRKQIIGKK-FFSSP--ASWRKI 154
           ++W    +Q+L   R ++E      RL+VE R   +  +K+I+ +    +SP  A+ RKI
Sbjct: 24  EEWEDDISQLLTHMRQVREAVPVNRRLQVELRKKLLSRQKEIMNQNGIVTSPEEATKRKI 83

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY---LTPSRD 211
           A T             G + SR+      + +  I  SL  + R  AN +Y   +T S  
Sbjct: 84  AQT-------------GLWQSRLAPFLGVLAAIFIVMSLTCLWRY-ANGQYHLEVTGSPQ 129

Query: 212 QIL--------FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA---PKRIGNFRSMI 260
           +I          +P  SP+  K+            V L  T +  A   P     F+S  
Sbjct: 130 EITRFWTEDAPLQPAVSPDGTKILVVRGGS----LVLLSHTGVQLAYLEPPEGATFQS-- 183

Query: 261 LAPRFSSNGKRA--LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             P +S NG++   + S Q  E +       Q  A + +T T   N+   YS  +++   
Sbjct: 184 --PTWSPNGEQISFVFSQQGKEEIR------QLAAEKIITATKMSNV---YSQTTARGAE 232

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFS-GEKFAIGVM 376
           +  +E K+ L      G   K    + ++ +F + V+SP G+ +A+     GE   + V 
Sbjct: 233 KKGQEAKDSLQTFA--GKKLKAADLNHKSIHFSNLVYSPDGNRLAYVMGRIGEPTEVWVR 290

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             +G ++R+    +N  APTWSP+G+ L+  R     T
Sbjct: 291 YSNGEEKRI----TNGDAPTWSPNGKYLVVQRPGKSKT 324


>gi|94970395|ref|YP_592443.1| WD-40-like beta propeller repeat-containing protein [Candidatus
           Koribacter versatilis Ellin345]
 gi|94552445|gb|ABF42369.1| WD40-like beta Propeller [Candidatus Koribacter versatilis
           Ellin345]
          Length = 496

 Score = 44.3 bits (103), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 6/88 (6%)

Query: 284 IYSVDLQSNATE-----RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +Y  +L +N TE     RLT    IN   S+SPD   IVF S+R+G   +YV        
Sbjct: 197 VYLAELGNNNTELKAPQRLTLNAAINWFGSWSPDGKNIVFTSNRDGNYNIYVQGIQERSP 256

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKF 366
           + ++   E     PV SP G  + + ++
Sbjct: 257 RALASGPEEQ-LSPVVSPDGKWVLYVQW 283


>gi|227539297|ref|ZP_03969346.1| tricorn family protease [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240979|gb|EEI90994.1| tricorn family protease [Sphingobacterium spiritivorum ATCC 33300]
          Length = 1056

 Score = 44.3 bits (103), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 7/175 (4%)

Query: 188 IIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           +IK+ LC +    G+ +     S+      P  SP+ Q + ++   D D+ +V   D  +
Sbjct: 1   MIKHFLCSLGISLGSLLTVHAQSQASFFSYPTLSPDGQTIVFSY--DGDLWKV-AADGGL 57

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                R+       +APR S +GK    S  ++  MD+Y + L+     +LT     +  
Sbjct: 58  ---ALRLTAMSGTEIAPRISPDGKWLAFSSNQNGNMDVYIMPLEGGDIRQLTYHDAGDEV 114

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            S+S DS  I F S R  +   Y +  NG   +R+      +  + V +P G+L+
Sbjct: 115 DSWSWDSKSIYFTSSRYNRFSSYKVAVNGGTAERMFPHYFNTIHNVVETPSGELL 169



 Score = 42.0 bits (97), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 35/61 (57%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +P FS +G   L +  ++   DI   +L++N+T  LTNT    ++ ++SPD   I F S+
Sbjct: 441 SPSFSPDGNYILFTAYRNFEQDIMLHNLKTNSTVNLTNTGVSELTPTWSPDGKYIYFASN 500

Query: 322 R 322
           R
Sbjct: 501 R 501



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 15/149 (10%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G+  + S   D    ++ V        RLT      I+   SPD   + F S++
Sbjct: 31  PTLSPDGQTIVFSYDGD----LWKVAADGGLALRLTAMSGTEIAPRISPDGKWLAFSSNQ 86

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----KFSGEKFAIGVMK 377
            G   +Y+M   G D ++++        D  WS     I FT     +FS  K A+    
Sbjct: 87  NGNMDVYIMPLEGGDIRQLTYHDAGDEVDS-WSWDSKSIYFTSSRYNRFSSYKVAV---- 141

Query: 378 KDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
             G+ ER+     N +     +PSG  L 
Sbjct: 142 NGGTAERMFPHYFNTIHNVVETPSGELLF 170


>gi|326491569|dbj|BAJ94262.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 654

 Score = 44.3 bits (103), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 16/121 (13%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVM-QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           + SP    +VF S R G + LY++  + G +  R   D E     P WSP G+LIAF+  
Sbjct: 458 AVSPCGRWVVFRSGRSGHKNLYIVDAARGEETIRRVTDGEWIDTMPSWSPDGELIAFSSN 517

Query: 367 SGEK-----FAIGVMKKDGSQERLL----------VEDSNLQAPTWSPSGRSLIFSRKKD 411
             E      F+I +++ DG+  R +           +   +    +SP G+ L+F+    
Sbjct: 518 RHEPANAAVFSIYLVRPDGTGLRRVHVAGPAGSAEADKERINHVCFSPDGQWLLFTATLG 577

Query: 412 G 412
           G
Sbjct: 578 G 578


>gi|317476264|ref|ZP_07935514.1| prolyl oligopeptidase [Bacteroides eggerthii 1_2_48FAA]
 gi|316907538|gb|EFV29242.1| prolyl oligopeptidase [Bacteroides eggerthii 1_2_48FAA]
          Length = 697

 Score = 44.3 bits (103), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 8/108 (7%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + SPD  QI +        + +   +L+VM ++GS+ ++I+ D       P W   G 
Sbjct: 48  SVAVSPDEKQIAYSVAYYSVPENKSNNELFVMNTDGSNNRQITCDNWQES-QPTWIKDGA 106

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
            IAF         I  M  DG+  + L + D +++  ++SP G+ L+F
Sbjct: 107 KIAFLCNETGSSQIWEMNPDGTARKQLTQYDGDIEGFSFSPDGKKLLF 154


>gi|304383776|ref|ZP_07366235.1| tricorn family protease MdsD [Prevotella marshii DSM 16973]
 gi|304335300|gb|EFM01571.1| tricorn family protease MdsD [Prevotella marshii DSM 16973]
          Length = 1069

 Score = 44.3 bits (103), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 6/98 (6%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T+ L++  SA  SPD   I F      K  ++ + + G + K+++ +     + PVWSP 
Sbjct: 20  TSPLWLRFSA-ISPDGRTIAFSY----KGDIFTVPTQGGNAKQLTTNASYDAY-PVWSPD 73

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           G  +AF         I VM K+G   + L  DS  + P
Sbjct: 74  GQTLAFASAREGSLDIYVMSKEGGSPKRLTTDSGDEVP 111



 Score = 43.1 bits (100), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 31/62 (50%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI++V  Q    ++LT     +    +SPD   + F S REG   +YVM   G   KR++
Sbjct: 44  DIFTVPTQGGNAKQLTTNASYDAYPVWSPDGQTLAFASAREGSLDIYVMSKEGGSPKRLT 103

Query: 343 QD 344
            D
Sbjct: 104 TD 105



 Score = 36.6 bits (83), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 14/109 (12%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S NGK     +  D    IY   +    T+++T+T     + ++SPD   + + ++R G
Sbjct: 317 LSPNGKEIAFVLHGD----IYVTSIDYKTTKQITDTPEQERNVNFSPDGKSLTYAAERNG 372

Query: 325 KEQLYVMQSNGSDQKRISQDKE----------ASYFDPVWSPQGDLIAF 363
             Q+YV +   S +K  +   +           +   P +SP G  IAF
Sbjct: 373 LWQIYVARLKNSSEKAFAYASDIEEEQLVKSSKTSLLPKFSPDGKSIAF 421


>gi|116625893|ref|YP_828049.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229055|gb|ABJ87764.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 898

 Score = 44.3 bits (103), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 118/284 (41%), Gaps = 24/284 (8%)

Query: 140 IGKKFFSSPASWRKIAHTISD-DIYQSI-----TGEKGDFNSRIL-FVSESVVS-GIIKN 191
           +G   F+ P   R++  T S   I + +      G+    NS  L FV   V + G ++N
Sbjct: 536 VGGVLFAVPFDPRRLEKTGSAVGIVEGVLRGNGVGQYAFSNSGTLAFVPGPVFTLGAVEN 595

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++DR G  +  L        F PR S + +++ Y   DD     +++++     AP+
Sbjct: 596 VLALVDRRG-EVEPLKVVPAGFAF-PRASSDGKRIVY-QIDDGKEAGIWILELGGGTAPR 652

Query: 252 RI---GNFRSMILAPRFSSNGKRALISVQKDEAMDI---YSVDLQSNATERLT--NTLFI 303
           R+   GN  +    P +SS+G++  ++ Q D   D+   +     S+A ERLT       
Sbjct: 653 RLTLPGNGGNRF--PIWSSDGQQ--VAFQSDREADLGIWWQRADGSSAAERLTKPGPGVT 708

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           ++  S+SPD     F   ++   +++            +          V+SP G  +A+
Sbjct: 709 HVPDSWSPDGQTFSFTEQKDKSAEIWTYSMRERKAAVFAAVPGGILGRSVFSPDGKWVAY 768

Query: 364 TKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
              +     + V      +   +   D +   P WSP G+ LI+
Sbjct: 769 QVDAQPNSRVYVRPFPPTATAYVAPADGDTHHPVWSPDGKELIY 812



 Score = 40.4 bits (93), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 69/150 (46%), Gaps = 17/150 (11%)

Query: 310 SPDSSQIVFESDREGKEQ-LYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S D  +IV++ D +GKE  +++++   G+  +R++         P+WS  G  +AF    
Sbjct: 622 SSDGKRIVYQID-DGKEAGIWILELGGGTAPRRLTLPGNGGNRFPIWSSDGQQVAFQSDR 680

Query: 368 GEKFAIGVMKKDGSQ--ERLLVEDSNL-QAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                I   + DGS   ERL      +   P +WSP G++  F+ +K  D  +++++  +
Sbjct: 681 EADLGIWWQRADGSSAAERLTKPGPGVTHVPDSWSPDGQTFSFTEQK--DKSAEIWTYSM 738

Query: 424 NGRNET--------LINTPAYASDPQWVGF 445
             R           ++    ++ D +WV +
Sbjct: 739 RERKAAVFAAVPGGILGRSVFSPDGKWVAY 768


>gi|300774153|ref|ZP_07084021.1| Tricorn family protease [Sphingobacterium spiritivorum ATCC 33861]
 gi|300758964|gb|EFK55792.1| Tricorn family protease [Sphingobacterium spiritivorum ATCC 33861]
          Length = 1056

 Score = 44.3 bits (103), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 7/175 (4%)

Query: 188 IIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           +IK+ LC +    G+ +     S+      P  SP+ Q + ++   D D+ +V   D  +
Sbjct: 1   MIKHFLCSLGISLGSLLTVHAQSQASFFSYPTLSPDGQTIVFSY--DGDLWKV-AADGGL 57

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                R+       +APR S +GK    S  ++  MD+Y + L+     +LT     +  
Sbjct: 58  ---ALRLTAMSGTEIAPRISPDGKWLAFSSNQNGNMDVYIMPLEGGDIRQLTYHDAGDEV 114

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            S+S DS  I F S R  +   Y +  NG   +R+      +  + V +P G+L+
Sbjct: 115 DSWSWDSKSIYFTSSRYNRFSSYKVAVNGGTAERMFPHYFNTIHNVVETPSGELL 169



 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 35/61 (57%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +P FS +G   L +  ++   DI   +L++N+T  LTNT    ++ ++SPD   I F S+
Sbjct: 441 SPSFSPDGNYILFTAYRNFEQDIMLHNLKTNSTINLTNTGVSELTPTWSPDGKYIYFASN 500

Query: 322 R 322
           R
Sbjct: 501 R 501



 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 15/149 (10%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G+  + S   D    ++ V        RLT      I+   SPD   + F S++
Sbjct: 31  PTLSPDGQTIVFSYDGD----LWKVAADGGLALRLTAMSGTEIAPRISPDGKWLAFSSNQ 86

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----KFSGEKFAIGVMK 377
            G   +Y+M   G D ++++        D  WS     I FT     +FS  K A+    
Sbjct: 87  NGNMDVYIMPLEGGDIRQLTYHDAGDEVDS-WSWDSKSIYFTSSRYNRFSSYKVAV---- 141

Query: 378 KDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
             G+ ER+     N +     +PSG  L 
Sbjct: 142 NGGTAERMFPHYFNTIHNVVETPSGELLF 170


>gi|116626062|ref|YP_828218.1| WD-40 repeat-containing serine/threonin protein kinase [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116229224|gb|ABJ87933.1| serine/threonine protein kinase with WD40 repeats [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 937

 Score = 44.3 bits (103), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 21/193 (10%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT------ERLTNTLFINISA 307
           G F S+ ++   ++ G  ALIS    E ++IY+ +  +          RLT  L  +   
Sbjct: 631 GMFSSLTVS---NNGGTMALISA--SEFVNIYAAEFAAAPVPALSNVRRLTFGLTQDYPQ 685

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S++PDS  I+FES+R G+ +L+  + +   +    + +E +   P  +P G  I F +  
Sbjct: 686 SWTPDSKAILFESNRNGRFELFRYELSSGRETMFYRGREDA-VQPRVTPDGRWILFRQ-G 743

Query: 368 GEKFAIGVMK--KDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +FA  +M+   DGS +   V    E    Q    +P+ R ++ S + D     +L  +
Sbjct: 744 ASRFAAQLMRLPVDGSAQAAPVPMAGETGAEQGCGAAPASRCVVRSVEADQFVVRELDPV 803

Query: 422 DLNGRNETLINTP 434
              G+   L  TP
Sbjct: 804 --QGKGRVLARTP 814


>gi|196230985|ref|ZP_03129845.1| peptidase S41 [Chthoniobacter flavus Ellin428]
 gi|196224815|gb|EDY19325.1| peptidase S41 [Chthoniobacter flavus Ellin428]
          Length = 1140

 Score = 44.3 bits (103), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 22/166 (13%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           RL+    +     +SPD +++ F  + +G   +YVM   G + +RI+    +      W 
Sbjct: 63  RLSTPRGVQQFPRFSPDGAKLAFTGNYDGNVDIYVMPVGGGEPQRITHHGGSERLL-GWY 121

Query: 356 PQG-------DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS- 407
           P G        ++AFT   G+ F   V  + G  E+L V      A   SP G +L F+ 
Sbjct: 122 PDGQSLLYESHMMAFTDRVGQLFK--VPAQGGLPEKLPVAYGEFGAI--SPDGHTLAFTP 177

Query: 408 --------RKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
                   ++  G     ++  DL  +  E + +  A  S P W G
Sbjct: 178 ISTDFATWKRYRGGMAPDIWLFDLEKKTAENVTHNEANDSQPMWHG 223



 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 6/114 (5%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYS 310
           R+ N    +     S  GKRAL   + D    I+SV  +      +T+T  +   + ++S
Sbjct: 306 RVQNVAGYVRNAAISPTGKRALFEARGD----IFSVPAEHGIVRDITSTSGVAERNPAWS 361

Query: 311 PDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           PD   I + SD+ G+ +L +  S+    ++ ++       + P WSP    I F
Sbjct: 362 PDGRWIAYFSDKTGEYELTIRPSDKAGGEETLTHLGRGFRYQPQWSPDAKKIVF 415


>gi|162452828|ref|YP_001615195.1| protein kinase [Sorangium cellulosum 'So ce 56']
 gi|161163410|emb|CAN94715.1| Protein kinase [Sorangium cellulosum 'So ce 56']
          Length = 1532

 Score = 44.3 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 110/239 (46%), Gaps = 19/239 (7%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            V + DG+    +    + +++   FSP+ +++  A++D     RV+  D   +  P+ + 
Sbjct: 1080 VWNADGSGEPRILRGHEDVVYSAAFSPDGERIVTASWD--KTARVWNADGSGE--PRILR 1135

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              +  + +  FS++G+R +++   D+   +++ +          +   ++ SA++SPD  
Sbjct: 1136 GHQDRVYSAVFSADGRR-IVTASYDKTARVWNAESTGEPLSLRGHDDSVS-SAAFSPDGK 1193

Query: 315  QIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +IV  S DR  +    V  +  +    I +  E   F   +SP G  I     S +K A 
Sbjct: 1194 RIVTASWDRTAR----VWNAEVAGAPVILRGHEGEVFSAAFSPDGKRIVTA--SDDKTA- 1246

Query: 374  GVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             V   DG+ E L++      +++  +SP G  ++ +     D  +++++ D +G   TL
Sbjct: 1247 RVWNADGTGEPLVIRGHADRVRSAAFSPDGERIVTA---SFDKTARVWNADGSGEPVTL 1302



 Score = 37.0 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 6/140 (4%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            E +V+    N+  V + DG     +    D+ +    FSP+ ++V  A++D    +RV+ 
Sbjct: 1319 ERIVTASYDNTARVWNADGTGEPVVLRGHDRWVVSAAFSPDGKRVVTASWD--KTVRVWN 1376

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D      P  +     ++ A  FS +GK  +++   D+   I++ D          +  
Sbjct: 1377 ADG--TGKPVVLRGHEHLVNAAVFSPDGKY-VVTASDDKTTRIWNADGTGEPLVLRGSDA 1433

Query: 302  FINISASYSPDSSQIVFESD 321
             +N + +YSPD  +IV  SD
Sbjct: 1434 SVN-AVAYSPDGKRIVTGSD 1452


>gi|328913235|gb|AEB64831.1| hypothetical protein LL3_03301 [Bacillus amyloliquefaciens LL3]
          Length = 694

 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 263 PRFSSNGKRA-LISVQKDEAMDIYSVDLQSNATERLTNTLFI-----NISASYSPDSSQI 316
           P+++ +G+RA  +  + ++  D YS  +    TE  T+  +      N S  +SPD  ++
Sbjct: 53  PQYAPDGRRAAYVRTKVNDKRDSYSSAIMVYDTESGTSNPWTFGDNKNSSPRWSPDGRRL 112

Query: 317 VFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAI 373
            F SDRE G  QLY++ +    +   + D      DP+W+P G   L++ +  S E+   
Sbjct: 113 AFVSDREDGVPQLYIIDAA-GGEAERAADIPWGVADPIWAPDGRSVLVSVSLTSAERADE 171

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              KK    E +     N+Q+ T+   G+ L+
Sbjct: 172 KEKKKQDEYEPV-----NIQSLTYKRDGKGLL 198



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 65/269 (24%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PR+SP+ +++A+ +  ++ + ++Y++D     A +R  +    +  P ++ +G+  L+SV
Sbjct: 103 PRWSPDGRRLAFVSDREDGVPQLYIIDAAGGEA-ERAADIPWGVADPIWAPDGRSVLVSV 161

Query: 277 Q----------------KDEAMDIYS--------------------VDLQSNATERLTNT 300
                            + E ++I S                    + L++   ++LT+ 
Sbjct: 162 SLTSAERADEKEKKKQDEYEPVNIQSLTYKRDGKGLLNGSWTQLVLIHLETGEIQQLTDH 221

Query: 301 LFINISASYSPDSSQIVF-----ESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVW 354
              +  A++SPD  Q+ F     E    GK + +Y+M     D K+I+     S+   V+
Sbjct: 222 EADHFDAAFSPDGKQLAFTANLCEPGDAGKPRDVYLMNLADGDLKQITP-HSGSFGSCVF 280

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKK---DGSQERL--------------LVEDSNLQA--- 394
           SP G  IA      E     ++K    D   ERL              L+ DS +     
Sbjct: 281 SPDGSYIALLGHENEFRNATLVKAWLYDVKNERLSCLTDMLDVHLSDALIADSLIGGVTP 340

Query: 395 -PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            P W+  G+       + G TG    SID
Sbjct: 341 RPVWTNDGQGFYVLGSEQGSTGIYYISID 369


>gi|270160220|ref|ZP_06188876.1| TolB-like protein [Legionella longbeachae D-4968]
 gi|269988559|gb|EEZ94814.1| TolB-like protein [Legionella longbeachae D-4968]
          Length = 286

 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 63/160 (39%), Gaps = 23/160 (14%)

Query: 284 IYSVDLQSNATERLTNTLFI-----------NISASY----SPDSSQIVFES--DREGKE 326
           IY V +Q+N       + FI            I+A Y    SPD   I + +   +    
Sbjct: 11  IYCVFVQANPVIAFERSGFIWTSNLDGSKARKITAGYVPEISPDGKYIAYNTADHQSTNR 70

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            L +++       ++      + F+PVWSP    + F  F    + + ++ KD S   LL
Sbjct: 71  YLAIVELKSGKVAQLQHIPSKNNFNPVWSPDSKKLIFNTFINNNWYLALINKDSSGYLLL 130

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               N   P W+  G S       D +T   +Y ++L G+
Sbjct: 131 NNTQNKYTPVWAQDGNSFF---THDLET---IYWMNLEGK 164


>gi|311745279|ref|ZP_07719064.1| peptidase, S9A/B/C family [Algoriphagus sp. PR1]
 gi|126577811|gb|EAZ82031.1| peptidase, S9A/B/C family [Algoriphagus sp. PR1]
          Length = 676

 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 40/241 (16%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYA-----TYDDEDILRVYL--MDTRIDRAPKRIG 254
           N+ Y+T         P  SP+  KV Y         D D   +++  +D   +R P   G
Sbjct: 33  NLEYVT--------NPSISPDGSKVVYVRNFKDIMTDRDYSNLWISNIDGTQNR-PLTQG 83

Query: 255 NFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           N     ++P +S +G + A  S Q+DE M ++ + L +  +  LTN+     S S+S D 
Sbjct: 84  NHND--VSPVWSHDGTKIAYRSNQQDEKMKLFVLYLDTKESVALTNSANPPGSVSWSFDD 141

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVW----SPQGDLIAFTKFSG 368
            ++ F          +V +   S     ++ + A++ D P++    + +GD   + K   
Sbjct: 142 QELAFTQ--------FVPKQKKSLLNIPAKPEGATWNDAPIYIDEMNYRGDGAGYYKSGN 193

Query: 369 EK-FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTG-SKLYSID 422
           ++ F IG+    G+  +   +D++   P W+  G+SLIFS       D + G S +Y +D
Sbjct: 194 QQIFTIGLAG--GTARQWTFDDNDYGIPIWTKDGKSLIFSANLHENHDLEPGNSDIYQLD 251

Query: 423 L 423
           L
Sbjct: 252 L 252



 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 12/113 (10%)

Query: 263 PRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           P ++ +GK  + S    E  D       IY +DL S + + LT+    +     SPD +Q
Sbjct: 219 PIWTKDGKSLIFSANLHENHDLEPGNSDIYQLDLASGSIKALTSRFGPDGGPVLSPDGTQ 278

Query: 316 IV---FESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           I    F+   +G +   LYVM  +GS  K ++ D +    +P W   G  I F
Sbjct: 279 IAYTGFDDSYQGYQVTNLYVMNLDGSGIKNLTADLDRDAANPQWESNGKGIYF 331



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 9/87 (10%)

Query: 352 PVWSPQGDLIAFTKF--SGEKFAIG---VMKKDGSQERLLVEDSNLQA--PTWSPSGRSL 404
           PV SP G  IA+T F  S + + +    VM  DGS  + L  D +  A  P W  +G+ +
Sbjct: 270 PVLSPDGTQIAYTGFDDSYQGYQVTNLYVMNLDGSGIKNLTADLDRDAANPQWESNGKGI 329

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLI 431
            F   + GDT  K+  + L G+  T++
Sbjct: 330 YFQYDEFGDT--KIGHVALTGKIRTVV 354


>gi|167762900|ref|ZP_02435027.1| hypothetical protein BACSTE_01264 [Bacteroides stercoris ATCC
           43183]
 gi|167699240|gb|EDS15819.1| hypothetical protein BACSTE_01264 [Bacteroides stercoris ATCC
           43183]
          Length = 705

 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 8/108 (7%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + SPD  QI +        + +   +L+VM ++GS  ++I++D       PVW   G 
Sbjct: 56  SVAVSPDEKQIAYSVAYYSVPENKSNNELFVMNADGSSNRQITRDSWQES-QPVWIKDGK 114

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
            IAF         +  M  DG++ + L   + +++   +SP G+ L+F
Sbjct: 115 KIAFLCNESGSSQVWEMNPDGTERKQLTRYEGDIEGFAFSPDGKKLLF 162


>gi|328554924|gb|AEB25416.1| YuxL [Bacillus amyloliquefaciens TA208]
          Length = 694

 Score = 44.3 bits (103), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 15/152 (9%)

Query: 263 PRFSSNGKRA-LISVQKDEAMDIYSVDLQSNATERLTNTLFI-----NISASYSPDSSQI 316
           P+++ +G+RA  +  + ++  D YS  +    TE  T+  +      N S  +SPD  ++
Sbjct: 53  PQYAPDGRRAAYVRTKVNDKRDSYSSAIMVYDTESGTSNPWTFGDNKNSSPRWSPDGRRL 112

Query: 317 VFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAI 373
            F SDRE G  QLY++ +    +   + D      DP+W+P G   L++ +  S E+   
Sbjct: 113 AFVSDREDGVPQLYIIDAA-GGEAERAADIPWGVADPIWAPDGRSVLVSVSLTSAERADE 171

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              KK    E +     N+Q+ T+   G+ L+
Sbjct: 172 KEKKKQDEYEPV-----NIQSLTYKRDGKGLL 198



 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 108/269 (40%), Gaps = 65/269 (24%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PR+SP+ +++A+ +  ++ + ++Y++D     A +R  +    +  P ++ +G+  L+SV
Sbjct: 103 PRWSPDGRRLAFVSDREDGVPQLYIIDAAGGEA-ERAADIPWGVADPIWAPDGRSVLVSV 161

Query: 277 Q----------------KDEAMDIYS--------------------VDLQSNATERLTNT 300
                            + E ++I S                    + L++   ++LT+ 
Sbjct: 162 SLTSAERADEKEKKKQDEYEPVNIQSLTYKRDGKGLLNGSWTQLVLIHLETGEIQQLTDH 221

Query: 301 LFINISASYSPDSSQIVF-----ESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVW 354
              +  A++SPD  Q+ F     E    GK + +Y+M     D K+I+     S+   V+
Sbjct: 222 EADHFDAAFSPDGKQLAFTANLCEPGDAGKPRDVYLMNLADGDLKQITP-HSGSFGSCVF 280

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKK---DGSQERL--------------LVEDSNLQA--- 394
           SP G  IA      E     ++K    D   ERL              L+ DS +     
Sbjct: 281 SPDGSYIALLGHENEFRNATLVKAWLYDVKNERLSCLTDMLDVHLSDALIADSLIGGVTP 340

Query: 395 -PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            P W+  G+       + G TG    SID
Sbjct: 341 RPVWTNDGQGFYVLGSEQGSTGIYYISID 369


>gi|148977418|ref|ZP_01814018.1| translocation protein TolB precursor [Vibrionales bacterium SWAT-3]
 gi|145963370|gb|EDK28635.1| translocation protein TolB precursor [Vibrionales bacterium SWAT-3]
          Length = 161

 Score = 44.3 bits (103), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 4/164 (2%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +Y++DL +    ++T     N    + PD   ++F SDR GK Q+Y +  + +   RI+ 
Sbjct: 1   MYTLDLATRKLTQITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYNVNLSNNSTSRITW 60

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
               +    + +P G  +     S   F +     +    ++L +    ++P+ +P+G  
Sbjct: 61  QGSQNLGGQI-TPDGRFLIMVNRSNSGFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGM 119

Query: 404 LIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
           +I+S   +      + SID  GR    L  T      P W  F+
Sbjct: 120 VIYSSIYNKTNVLSMVSID--GRFKARLPATNGRVRAPAWSPFL 161



 Score = 39.7 bits (91), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 24/172 (13%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +Y +D    R   +I   RS    P +  +GK  + +  +     IY+V+L +N+T R+T
Sbjct: 1   MYTLDL-ATRKLTQITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYNVNLSNNSTSRIT 59

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-------- 350
                N+    +PD           G+  + V +SN S      QD E            
Sbjct: 60  WQGSQNLGGQITPD-----------GRFLIMVNRSN-SGFNLAKQDLETGAVQVLTKTLL 107

Query: 351 --DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
              P  +P G ++ ++    +   + ++  DG  + RL   +  ++AP WSP
Sbjct: 108 DESPSIAPNGGMVIYSSIYNKTNVLSMVSIDGRFKARLPATNGRVRAPAWSP 159


>gi|315637614|ref|ZP_07892820.1| translocation protein TolB [Arcobacter butzleri JV22]
 gi|315478068|gb|EFU68795.1| translocation protein TolB [Arcobacter butzleri JV22]
          Length = 439

 Score = 43.9 bits (102), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 95/200 (47%), Gaps = 18/200 (9%)

Query: 217 PRFSPNQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           P+++  +QK  Y T   YD   ++++ + +    R+ + I +   M+     S +G + L
Sbjct: 213 PKWADKEQKTIYYTSYNYDKPTLVKLNIYN----RSKEVIMDSDGMLACSDVSKDGSKLL 268

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           I+       DI+  D+ +   +++     +I++   +  D  +IVF SDR G   ++  +
Sbjct: 269 ITASPTGQPDIFLYDVNTRTKKQVAGGPGWIDVGGQFVEDDKEIVFVSDRLGNPNIFKQR 328

Query: 333 SNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFS----GEKFAIGVMK-KDGSQERLL 386
              S  +R +   K  S    V S   ++I  +K S    G+ F + ++  +  + +RL 
Sbjct: 329 IGSSSVERMVFHSKNNS---SVTSNGNNIIFSSKDSDNEMGKSFNLYLISTRTDNLQRLT 385

Query: 387 VEDSNLQAPTWSPSGRSLIF 406
            +  N Q P +SP G+S++F
Sbjct: 386 TQGVN-QFPKFSPDGQSVLF 404


>gi|149277359|ref|ZP_01883501.1| peptidase S41 [Pedobacter sp. BAL39]
 gi|149232236|gb|EDM37613.1| peptidase S41 [Pedobacter sp. BAL39]
          Length = 1099

 Score = 43.9 bits (102), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 78/179 (43%), Gaps = 19/179 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI+      +   RLT    +  +  +SPD +QI F  + +G   +YV+  +G   KRI+
Sbjct: 52  DIWIAGRDGSNPRRLTVNPAVEQNPIFSPDGTQIAFTGNYDGNTDIYVIPVSGGSPKRIT 111

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV----MKKDGS-QERLLVEDSNLQAPT- 396
               A      W    D + FT      FA+      +K DG+ +E L + ++   +P+ 
Sbjct: 112 YHPSADVLR-GWI-GNDQLYFTSVRDYNFALSPRMHRIKLDGTAEEALPMPEAAQGSPSA 169

Query: 397 ----WS------PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQWVG 444
               W+      PS R+ +  ++  G    +++  D   +N  +I  P   +  PQW+G
Sbjct: 170 DGRYWAYIKNGDPSERANVAFKRYRGGGMPQIWIFDTQTKNIEIIPGPGSNNVKPQWLG 228



 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 42/216 (19%), Positives = 85/216 (39%), Gaps = 57/216 (26%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----SYSPDSSQIVFE 319
           F   G+  L+     +  D+ S+ +Q++   +  +  ++++SA       SP   + +FE
Sbjct: 276 FEQAGRIHLMDATSHQVKDL-SISIQADVPYKRPH--YVDMSADIRNSEISPKGVRALFE 332

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S    + +++ +     D + IS    +    P WSP G  I++           +  K+
Sbjct: 333 S----RGEIFSVPKEKGDARNISNSPGSYEKFPAWSPDGKYISY-----------LSDKN 377

Query: 380 GSQERLLVEDSNLQA--------------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           GS + +L   +   A              P WSP  + L ++     D    L+ ID+N 
Sbjct: 378 GSYQLVLANQATKAAPEYISLGSTPFYFQPVWSPDSKKLFYA-----DAHLNLFYIDINA 432

Query: 426 RNETLINT---------------PAYASDPQWVGFM 446
           R   L+                 P+++ D +W+ ++
Sbjct: 433 RKPVLVKADTESPNPGRTYNPFNPSWSPDSKWISYV 468


>gi|209523154|ref|ZP_03271710.1| WD-40 repeat protein [Arthrospira maxima CS-328]
 gi|209496305|gb|EDZ96604.1| WD-40 repeat protein [Arthrospira maxima CS-328]
          Length = 829

 Score = 43.9 bits (102), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 8/140 (5%)

Query: 182 ESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +++ SG   N++ + D   G  +R LT   D +L   RFSP+ Q +A  +YD+     V 
Sbjct: 559 QTLASGSHDNTVRLWDVATGRELRQLTGHTDWVL-SVRFSPDGQTLASGSYDNT----VR 613

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L D    R  +++      +L+ RFS +G+  L S   D  + ++ V       +   +T
Sbjct: 614 LWDVATGRPLRQLTGHTDWVLSVRFSPDGQ-TLASGSDDNTVRLWDVPTGRELRQLTGHT 672

Query: 301 LFINISASYSPDSSQIVFES 320
             +N S  +SPD   +   S
Sbjct: 673 NSVN-SVRFSPDGQTLASGS 691


>gi|58580571|ref|YP_199587.1| hypothetical protein XOO0948 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58425165|gb|AAW74202.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 800

 Score = 43.9 bits (102), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 11/218 (5%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRA 272
             P  SP+   VAYA+   +      L+ T  +  P+ +      +    P +S +G+  
Sbjct: 250 LTPSLSPDGAMVAYASLTGDRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGREI 309

Query: 273 LISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQ 327
             S Q  +    + I +    + A E +       +S S+SPD+  ++F S     G  +
Sbjct: 310 AFSRQAPDGSCRVMIAAATGPAAAREVVRCDRADMLSFSWSPDARALLFGSMTGSYGAAR 369

Query: 328 LYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +  +       + ++   +A  FD  P +SP G  I F +         +  + G+ ERL
Sbjct: 370 IRRLNLETGQWQTLNYPAQAGDFDYAPRYSPDGHWIVFLRNPQLGDLWRIPAEGGAAERL 429

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             + +++   +W P G  +IF R+ D +  ++LY +DL
Sbjct: 430 THDTADIWGWSWLPDGSGVIFGRRVDIE--ARLYRLDL 465



 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 21/162 (12%)

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQG 358
           +++ S SPD + + + S   DR G   L     N     R+ +       D  P WSP G
Sbjct: 249 DLTPSLSPDGAMVAYASLTGDRTGTSILVKTTDNA--YPRVLETPAPGVSDRLPAWSPDG 306

Query: 359 DLIAFTK----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             IAF++     S             ++E +  + +++ + +WSP  R+L+F        
Sbjct: 307 REIAFSRQAPDGSCRVMIAAATGPAAAREVVRCDRADMLSFSWSPDARALLFGSMTGSYG 366

Query: 415 GSKLYSIDLNGRNETLINTPA----------YASDPQWVGFM 446
            +++  ++L       +N PA          Y+ D  W+ F+
Sbjct: 367 AARIRRLNLETGQWQTLNYPAQAGDFDYAPRYSPDGHWIVFL 408



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 19/173 (10%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           P + G+F     APR+S +G   ++ ++  +  D++ +  +  A ERLT+        S+
Sbjct: 386 PAQAGDFD---YAPRYSPDGHW-IVFLRNPQLGDLWRIPAEGGAAERLTHDTADIWGWSW 441

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PD S ++F    + + +LY +    S    +  D +A   D      G L+    F+  
Sbjct: 442 LPDGSGVIFGRRVDIEARLYRLDLLDSSLHDLGVD-DAQAPDVA---HGHLV----FAQR 493

Query: 370 KFAIGV-------MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           K   GV       M     + RL         P  +P GR L+F+  + G  G
Sbjct: 494 KPQFGVYQVIRDTMNGGYIRRRLFSSSGRDDQPMIAPDGRQLVFASNRSGTYG 546


>gi|315453875|ref|YP_004074145.1| putative protein tolB [Helicobacter felis ATCC 49179]
 gi|315132927|emb|CBY83555.1| putative protein tolB precursor [Helicobacter felis ATCC 49179]
          Length = 414

 Score = 43.9 bits (102), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 94/229 (41%), Gaps = 22/229 (9%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSI 166
           A +LV+ RV K G+    V  R +DV  +  +  K + F+    +  IAH ++ DI  ++
Sbjct: 85  ASLLVSLRVDKLGQ----VNVRFYDVAHQSVLGIKDYTFNQKPLYPFIAHRVAIDINDAL 140

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI------LFEPRFS 220
                 + +R +  ++ +  G+ K S+            LT  +D I      +F    +
Sbjct: 141 KAPPIAWMARFVIFAKYIKPGVTKISIADYT--------LTYKQDIIDNGMLNVFPKWAN 192

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
             Q    Y  Y     +  Y +    D   + I     M      S NG++ L+++  + 
Sbjct: 193 AEQSAFYYTQYLHHPTIIKYNLR---DGTSEVITQSEGMATVSSVSRNGRKLLLTLAPNG 249

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
             DIY  D     + RLT    I++  ++  +   +VF SDR G   +Y
Sbjct: 250 QSDIYLYDTAKKNSIRLTKYQGIDVLGNFVGNEKGMVFVSDRAGYPNVY 298


>gi|52081717|ref|YP_080508.1| putative acylaminoacyl-peptidase YuxL [Bacillus licheniformis ATCC
           14580]
 gi|52787103|ref|YP_092932.1| YuxL [Bacillus licheniformis ATCC 14580]
 gi|52004928|gb|AAU24870.1| putative acylaminoacyl-peptidase YuxL [Bacillus licheniformis ATCC
           14580]
 gi|52349605|gb|AAU42239.1| YuxL [Bacillus licheniformis ATCC 14580]
          Length = 653

 Score = 43.9 bits (102), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 12/110 (10%)

Query: 309 YSPDSSQIVFESDREGKEQ--------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           YSPD ++I +   +  ++Q        +Y  +   S Q    + +      P WSP G  
Sbjct: 21  YSPDGAKIAYVQTKVNEKQDSYDSHIMIYDREKQASVQWTFGKGRNQH---PRWSPDGKY 77

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
           +AFT    E   I V+   G + R + +   ++  P WSP G+SL+ S K
Sbjct: 78  LAFTSNREETAQIYVISAAGGEARKVTDIPYDVSQPEWSPDGKSLLCSVK 127



 Score = 43.9 bits (102), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 8/118 (6%)

Query: 260 ILAPRFSSNGKR-ALISVQKDEAMDIYS-----VDLQSNATERLTNTLFINISASYSPDS 313
           I  P++S +G + A +  + +E  D Y       D +  A+ + T     N    +SPD 
Sbjct: 16  ITDPQYSPDGAKIAYVQTKVNEKQDSYDSHIMIYDREKQASVQWTFGKGRNQHPRWSPDG 75

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKFSGEK 370
             + F S+RE   Q+YV+ + G + ++++ D       P WSP G  L+   K + E+
Sbjct: 76  KYLAFTSNREETAQIYVISAAGGEARKVT-DIPYDVSQPEWSPDGKSLLCSVKLTKEE 132



 Score = 43.1 bits (100), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 91/197 (46%), Gaps = 20/197 (10%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            PR+SP+ + +A+ T + E+  ++Y++      A +++ +    +  P +S +GK  L S
Sbjct: 68  HPRWSPDGKYLAF-TSNREETAQIYVISAAGGEA-RKVTDIPYDVSQPEWSPDGKSLLCS 125

Query: 276 VQ--KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQ 332
           V+  K+E++D          TE   +      S SY  D         + GK  QL ++Q
Sbjct: 126 VKLTKEESVD------DEKKTEIEDHEPLEVDSLSYKADGQGF-----KRGKYTQLVLVQ 174

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVED 389
               + K+++ D E  +F   +SP GD IAF     +     V   +   G  +RL  ++
Sbjct: 175 VETGEMKQLT-DLERDHFSHAFSPCGDQIAFCANQTDMRVNDVYLMNLSTGDLKRLTGQN 233

Query: 390 SNLQAPTWSPSGRSLIF 406
               + ++SP G+ L F
Sbjct: 234 GIFSSLSFSPDGKHLAF 250


>gi|94971144|ref|YP_593192.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553194|gb|ABF43118.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 888

 Score = 43.9 bits (102), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 12/105 (11%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQA-PTWSPSGRSLIFSRK 409
           PVWSP G  IAFT   G   AI        ++ +L V D +L    TWSP GR L++ + 
Sbjct: 672 PVWSPDGSRIAFTMNQGASMAIKPSAGGAPEQTILTVPDHSLSGVTTWSPDGRHLMYQQG 731

Query: 410 KDGDTGSKLYSIDLNGR--------NETLINTPAYASDPQWVGFM 446
              +   +L  +D +G+        N+    +  ++ D +WV +M
Sbjct: 732 YGLEL--QLSLLDPSGQGKPQAFAGNDMRTMSGQFSPDGRWVAYM 774


>gi|262173178|ref|ZP_06040855.1| protease-related protein [Vibrio mimicus MB-451]
 gi|261890536|gb|EEY36523.1| protease-related protein [Vibrio mimicus MB-451]
          Length = 1085

 Score = 43.9 bits (102), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 26/184 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           PRF+ +    L        + + +VD QS        T   +I+   SPD  QI F    
Sbjct: 4   PRFTLSSALVLTFFSTAPILSLANVDTQSEVA-HAAPTWLRDIA--LSPDGKQIAFTY-- 58

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG---VMKKD 379
               Q++++ + G +   +++    S   PVWSP    +AFT     ++ +G   ++   
Sbjct: 59  --AGQIWLVPAQGGEAIALTESGVYSE-APVWSPDSQSLAFT---ANRYGMGDVFILAVQ 112

Query: 380 GSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDT-----------GSKLYSIDLNGRN 427
           G + R L        P  +S  G+ L FS ++ GD             ++LYS+ + G  
Sbjct: 113 GGESRRLTYHGAKDTPYAFSADGKQLYFSSRRLGDEKANANVKQGGFTAQLYSVPVTGGR 172

Query: 428 ETLI 431
           E L+
Sbjct: 173 EQLV 176


>gi|83859080|ref|ZP_00952601.1| putative enzyme [Oceanicaulis alexandrii HTCC2633]
 gi|83852527|gb|EAP90380.1| putative enzyme [Oceanicaulis alexandrii HTCC2633]
          Length = 682

 Score = 43.9 bits (102), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 15/84 (17%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGS------------QERLLVED-SNLQAPTWSPSG 401
           SP G+ +AFT         G  ++DG+              RL V D S +    WSP G
Sbjct: 45  SPDGEQVAFTLSVPRNVVAG--EEDGAPRAELYVASGPDAARLYVSDESYISGAHWSPQG 102

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNG 425
             L +  ++DGDTGS LY I ++G
Sbjct: 103 DGLTYLTRRDGDTGSALYEIPVDG 126



 Score = 43.9 bits (102), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 16/118 (13%)

Query: 310 SPDSSQIVF-----------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           SPD  Q+ F           E D   + +LYV  ++G D  R+    E+      WSPQG
Sbjct: 45  SPDGEQVAFTLSVPRNVVAGEEDGAPRAELYV--ASGPDAARLYVSDESYISGAHWSPQG 102

Query: 359 D-LIAFTKFSGEKF-AIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           D L   T+  G+   A+  +  DG Q  R+   D+++Q+   +P G +L F  +   D
Sbjct: 103 DGLTYLTRRDGDTGSALYEIPVDGGQARRIFAHDASIQSYVIAPDGETLFFIARDKAD 160


>gi|258624228|ref|ZP_05719177.1| Periplasmic protease [Vibrio mimicus VM603]
 gi|258583379|gb|EEW08179.1| Periplasmic protease [Vibrio mimicus VM603]
          Length = 1085

 Score = 43.9 bits (102), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 75/184 (40%), Gaps = 26/184 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           PRF+ +    L        + + +VD QS         L      + SPD  QI F    
Sbjct: 4   PRFTLSSALVLTFFSTAPILSLANVDTQSEVAHAAPTWLR---DIALSPDGKQIAFTY-- 58

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG---VMKKD 379
               Q++++ + G +   +++    S   PVWSP    +AFT     ++ +G   ++   
Sbjct: 59  --AGQIWLVPAQGGEAIALTESGVYSE-APVWSPDSQSLAFT---ANRYGMGDVFILAVQ 112

Query: 380 GSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDT-----------GSKLYSIDLNGRN 427
           G + R L        P  +S  G+ L FS ++ GD             ++LYS+ + G  
Sbjct: 113 GGESRRLTYHGAKDTPYAFSADGKQLYFSSRRLGDEKANANVKQGGFTAQLYSVPVTGGR 172

Query: 428 ETLI 431
           E L+
Sbjct: 173 EQLV 176


>gi|157737824|ref|YP_001490508.1| translocation protein TolB [Arcobacter butzleri RM4018]
 gi|157699678|gb|ABV67838.1| colicin tolerance-like protein (tolB) [Arcobacter butzleri RM4018]
          Length = 430

 Score = 43.9 bits (102), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 95/200 (47%), Gaps = 18/200 (9%)

Query: 217 PRFSPNQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           P+++  +QK  Y T   YD   ++++ + +    R+ + I +   M+     S +G + L
Sbjct: 204 PKWADKEQKTIYYTSYNYDKPTLVKLNIYN----RSKEVIMDSDGMLACSDVSKDGSKLL 259

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           I+       DI+  D+ +   +++     +I++   +  D  +IVF SDR G   ++  +
Sbjct: 260 ITASPTGQPDIFLYDVNTRTKKQVAGGPGWIDVGGQFVEDDKEIVFVSDRLGNPNIFKQR 319

Query: 333 SNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFS----GEKFAIGVMK-KDGSQERLL 386
              S  +R +   K  S    V S   ++I  +K S    G+ F + ++  +  + +RL 
Sbjct: 320 IGSSSVERMVFHSKNNS---SVTSNGNNIIFSSKDSDNEMGKSFNLYLISTRTDNLQRLT 376

Query: 387 VEDSNLQAPTWSPSGRSLIF 406
            +  N Q P +SP G+S++F
Sbjct: 377 TQGVN-QFPKFSPDGQSVLF 395


>gi|305665561|ref|YP_003861848.1| acylaminoacyl-peptidase [Maribacter sp. HTCC2170]
 gi|88710317|gb|EAR02549.1| acylaminoacyl-peptidase [Maribacter sp. HTCC2170]
          Length = 681

 Score = 43.9 bits (102), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 13/111 (11%)

Query: 263 PRFSSNG-----KRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P+ S NG     +R  + V KD A+ +++ +    +  ++LT+      S  +SP   ++
Sbjct: 41  PQISPNGDWIVYRRMRMDVMKDRAVGNLWMLKGDGSQHQKLTSRESGESSPKWSPSGDRL 100

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---VWSPQGDLIAFT 364
            F SD + + ++Y+   N     +ISQ      F P   VWSP+G+ +AFT
Sbjct: 101 AFVSDTDEESEIYIYWVNSGKIAKISQLP----FSPSSLVWSPKGNQLAFT 147



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 7/79 (8%)

Query: 351 DPVWSPQGDLIAFTKFSGEKF---AIG---VMKKDGSQ-ERLLVEDSNLQAPTWSPSGRS 403
           DP  SP GD I + +   +     A+G   ++K DGSQ ++L   +S   +P WSPSG  
Sbjct: 40  DPQISPNGDWIVYRRMRMDVMKDRAVGNLWMLKGDGSQHQKLTSRESGESSPKWSPSGDR 99

Query: 404 LIFSRKKDGDTGSKLYSID 422
           L F    D ++   +Y ++
Sbjct: 100 LAFVSDTDEESEIYIYWVN 118



 Score = 37.7 bits (86), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 14/112 (12%)

Query: 310 SPDSSQIVFESDR------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SP+   IV+   R           L++++ +GS  ++++  +E+    P WSP GD +AF
Sbjct: 44  SPNGDWIVYRRMRMDVMKDRAVGNLWMLKGDGSQHQKLTS-RESGESSPKWSPSGDRLAF 102

Query: 364 TKFSGEKFAIGVMKKDGSQ----ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              + E+  I +   +  +     +L    S+L    WSP G  L F+  K+
Sbjct: 103 VSDTDEESEIYIYWVNSGKIAKISQLPFSPSSL---VWSPKGNQLAFTMNKE 151


>gi|159898085|ref|YP_001544332.1| WD40 domain-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159891124|gb|ABX04204.1| WD40 domain protein beta propeller [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 375

 Score = 43.9 bits (102), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 40/177 (22%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           GK   + V+     DI+   +      R   T       S+SPD S+I +    E    +
Sbjct: 57  GKLLFVRVENGSG-DIW---VHEGTEARRITTSHKKYQPSWSPDGSKIAYIQREESFADI 112

Query: 329 YVMQSNGSDQKRISQDKEAS--------------YFDPVWSPQGDLIAFTK--------- 365
           +VM +NGS++++++ ++  +               F P WSP G  +++           
Sbjct: 113 WVMNANGSNKQQVTNNEPTNIAARSEDHIQTLRWAFYPRWSPDGQFLSYVSQAQTPRDVG 172

Query: 366 ------------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
                       +   +   G    + S +R +  D++L  PTWS  G  +++S+ +
Sbjct: 173 GGYQEYPLSLYIYGTRRIGTGQF-PEASFQRFVQADTDLSHPTWSDDGTMIVYSQAE 228


>gi|299146378|ref|ZP_07039446.1| protein TolB [Bacteroides sp. 3_1_23]
 gi|298516869|gb|EFI40750.1| protein TolB [Bacteroides sp. 3_1_23]
          Length = 327

 Score = 43.9 bits (102), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 18/167 (10%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +P +SS+ K    + Q+ + + I+S ++Q+N     +N +      +  P + +  F   
Sbjct: 157 SPIYSSDMKLIFFARQEMKGISIWSYNIQNNFLSNYSNGM------NPCPINKESAFLCT 210

Query: 322 R---EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--------KFSGEK 370
           R    GK +++ +      ++ I  D + S+  P  SP G  I F          FS   
Sbjct: 211 RISGTGKSEIWKINYKTGVEECIVSDPQHSFTTPTLSPDGQWILFVGDSKIDDNNFSYLN 270

Query: 371 FAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             I V K DG++  ++    ++  +P WS  G+ + F  ++   TG+
Sbjct: 271 TDIFVCKVDGTRLSQITYHAADDLSPVWSKDGKYIYFISQRGDPTGT 317


>gi|299138847|ref|ZP_07032024.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
 gi|298599001|gb|EFI55162.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
          Length = 689

 Score = 43.9 bits (102), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 57/288 (19%), Positives = 118/288 (40%), Gaps = 69/288 (23%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT------RIDRAPKRIGNFR 257
           R   PS + +   P +SP+ + +A+  +  + + +++++        ++ ++   +G F 
Sbjct: 79  RAPVPSLEGVPGSPEWSPDGRWLAFVEHPKQGVGQIWIVPAEGSVAWQVSKSATDVGLFH 138

Query: 258 SMILAPRFSSNGKR-ALISVQKDEAMD--------------------IYSVDLQSNATER 296
                  +S++ K  A ++ Q+D A++                    ++SVDL++ +   
Sbjct: 139 -------WSADSKHIAFLTTQRDHAVNGRAERFGSFEVVGKDYQQTQLWSVDLEAASGHI 191

Query: 297 LTNTLFINISA--------SYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRIS 342
                 + +S+        S+SPDS+ I F +           + +Y++     ++ R  
Sbjct: 192 AAQVPRVLVSSPAFSIADFSWSPDSTMIAFTAAGTPLLTAYSSQDIYLLDRTKGNEVRKI 251

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKDGSQERLLVE------- 388
               +  F P++SP G  IAF  + G++         + V  +D  Q  +          
Sbjct: 252 VGLPSPDFSPIFSPDGKKIAFLTWLGQRDFFYSNVHIVTVDVEDAWQRPVTAAAAVRDVT 311

Query: 389 ---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              D N     W  SG SL FS ++   T + L+ ID +G + T I +
Sbjct: 312 ARFDENPSLLGW--SGNSLYFSAEQ--KTSTHLFRIDSDGNHLTRITS 355


>gi|84622525|ref|YP_449897.1| hypothetical protein XOO_0868 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84366465|dbj|BAE67623.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 783

 Score = 43.9 bits (102), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 11/218 (5%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRA 272
             P  SP+   VAYA+   +      L+ T  +  P+ +      +    P +S +G+  
Sbjct: 233 LTPSLSPDGAMVAYASLTGDRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGREI 292

Query: 273 LISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQ 327
             S Q  +    + I +    + A E +       +S S+SPD+  ++F S     G  +
Sbjct: 293 AFSRQAPDGSCRVMIAAATGPAAAREVVRCDRADMLSFSWSPDARALLFGSMTGSYGAAR 352

Query: 328 LYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +  +       + ++   +A  FD  P +SP G  I F +         +  + G+ ERL
Sbjct: 353 IRRLNLETGQWQTLNYPAQAGDFDYAPRYSPDGHWIVFLRNPQLGDLWRIPAEGGAAERL 412

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             + +++   +W P G  +IF R+ D +  ++LY +DL
Sbjct: 413 THDTADIWGWSWLPDGSGVIFGRRVDIE--ARLYRLDL 448



 Score = 40.4 bits (93), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 66/162 (40%), Gaps = 21/162 (12%)

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQG 358
           +++ S SPD + + + S   DR G   L     N     R+ +       D  P WSP G
Sbjct: 232 DLTPSLSPDGAMVAYASLTGDRTGTSILVKTTDNA--YPRVLETPAPGVSDRLPAWSPDG 289

Query: 359 DLIAFTK----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             IAF++     S             ++E +  + +++ + +WSP  R+L+F        
Sbjct: 290 REIAFSRQAPDGSCRVMIAAATGPAAAREVVRCDRADMLSFSWSPDARALLFGSMTGSYG 349

Query: 415 GSKLYSIDLNGRNETLINTPA----------YASDPQWVGFM 446
            +++  ++L       +N PA          Y+ D  W+ F+
Sbjct: 350 AARIRRLNLETGQWQTLNYPAQAGDFDYAPRYSPDGHWIVFL 391



 Score = 37.7 bits (86), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 19/173 (10%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           P + G+F     APR+S +G   ++ ++  +  D++ +  +  A ERLT+        S+
Sbjct: 369 PAQAGDFD---YAPRYSPDGHW-IVFLRNPQLGDLWRIPAEGGAAERLTHDTADIWGWSW 424

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PD S ++F    + + +LY +    S    +  D +A   D      G L+    F+  
Sbjct: 425 LPDGSGVIFGRRVDIEARLYRLDLLDSSLHDLGVD-DAQAPDVA---HGHLV----FAQR 476

Query: 370 KFAIGV-------MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           K   GV       M     + RL         P  +P GR L+F+  + G  G
Sbjct: 477 KPQFGVYQVIRDTMNGGYIRRRLFSSSGRDDQPMIAPDGRQLVFASNRSGTYG 529


>gi|219848282|ref|YP_002462715.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Chloroflexus aggregans DSM 9485]
 gi|219542541|gb|ACL24279.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Chloroflexus aggregans DSM 9485]
          Length = 677

 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 16/96 (16%)

Query: 348 SYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPS 400
           SYFDP  SP G  IAF + +     GE   + ++  +G +   L    D N++   W P 
Sbjct: 267 SYFDPQPSPDGSQIAFLRLNEERLLGEGRRVAIIPAEGGEPHDLTAHTDLNVEQFRWQPD 326

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           G+ ++FS    GD  + +Y I L G       TP Y
Sbjct: 327 GQGILFSAGWRGD--AHVYQIGLPG-------TPTY 353



 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 8/99 (8%)

Query: 351 DPVWSPQGDLIAFTKFS------GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           DP  SP G   A    +      G +  I ++  +G   R      + + P WSP GR L
Sbjct: 22  DPRLSPDGQTAAVVWVTVDRVNNGYRRQIVLVPTNGGSLRRFTRGKHDRQPRWSPDGRWL 81

Query: 405 IFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQW 442
            F   +D + G ++Y I ++ G    L   P  ASDP W
Sbjct: 82  AFVSHRDDERG-QIYLIPVDGGEARQLTAMPNGASDPAW 119



 Score = 39.7 bits (91), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 104/284 (36%), Gaps = 65/284 (22%)

Query: 207 TPSRDQI--------LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           TPSR  I        L +PR SP+ Q  A      + +   Y    +I   P   G+ R 
Sbjct: 5   TPSRFTIDDLYELGWLEDPRLSPDGQTAAVVWVTVDRVNNGYR--RQIVLVPTNGGSLRR 62

Query: 259 MILA-----PRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                    PR+S +G+  A +S + DE   IY + +      +LT         ++SPD
Sbjct: 63  FTRGKHDRQPRWSPDGRWLAFVSHRDDERGQIYLIPVDGGEARQLTAMPNGASDPAWSPD 122

Query: 313 SSQIVFES----DREGKEQLYVMQSNGSDQKRISQDKE---------------------- 346
              I F S    D + +E    M S  +D     + +E                      
Sbjct: 123 GRWIAFLSPVSVDEQAREDAGEMPSPPADAWEARRAREQRQHDEELRIDPRVVTKLPYRS 182

Query: 347 -ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQAPTWSPSGRS 403
             SYFD  W              + + + V  +D   +  RL   + +   P W P+G +
Sbjct: 183 GTSYFDDRWR-------------QVYVVEVDDEDRTATPRRLTSGEIHYSTPVWLPNGEA 229

Query: 404 LIFSRKKDGDTGS-----KLYSIDLNGRNETLINTPAYAS-DPQ 441
           L+ +  +D +  S      +  I L+G    L  +P ++  DPQ
Sbjct: 230 LLSTATRDPEADSLFAYYDVVRIPLDGLPHAL-TSPGFSYFDPQ 272


>gi|119775549|ref|YP_928289.1| protease [Shewanella amazonensis SB2B]
 gi|119768049|gb|ABM00620.1| protease, putative [Shewanella amazonensis SB2B]
          Length = 1084

 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 28/230 (12%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS----VDL 289
           +++L + L      R  + + N    +   R + +G +A+I+ +   A+        V +
Sbjct: 285 DEVLPLTLTSDFTARRARWVNNPMDYVSDVRLAPSGDKAVITARSKVAIAATDGRRLVQV 344

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEAS 348
              A  R+ N +        S D   +   SD  G+++L+   ++GSD   +++QD  A 
Sbjct: 345 GVPADSRIRNAVL-------SHDGQSVFGISDASGEQELWRFPADGSDGGVQLTQDASAM 397

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSL 404
               V SP G  +A   + G  +   +  K G+  R++     L  P     WSP  R L
Sbjct: 398 RMSLVLSPDGRYLAHDDYDGNLYLYDI--KKGTNSRIVTGHQGL-GPYGDIIWSPDSRFL 454

Query: 405 IFSRKKDGDTGSK--LYSIDLNGRNETLIN------TPAYASDPQWVGFM 446
                  G    +  LYS++   R  +L +      +PA++ D +W+ F+
Sbjct: 455 ALGMNVMGQNRGQIVLYSLE-EKRQASLTSDKYESFSPAFSRDGEWLYFL 503



 Score = 37.4 bits (85), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 32/60 (53%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D++   L      RLT+       A  SPD +Q+ F ++ +G +++Y+M   G + KR+S
Sbjct: 45  DLWLNRLGQAQASRLTSQSAEESQARISPDGTQVAFVANYDGTDEVYLMPIGGGEAKRVS 104


>gi|329963114|ref|ZP_08300894.1| WD40-like protein [Bacteroides fluxus YIT 12057]
 gi|328529155|gb|EGF56085.1| WD40-like protein [Bacteroides fluxus YIT 12057]
          Length = 1089

 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 12/92 (13%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--- 339
           D+Y   ++   T+++TNT +     +++PD   +V+ S+R G  QLY       D+K   
Sbjct: 336 DVYVTSVEYKTTKQITNTPYQERDINFAPDGRSLVYASERGGLWQLYTSSIVRKDEKLFT 395

Query: 340 --------RISQDKEASYFDPVWSPQGDLIAF 363
                   R++    AS F P +SP G  +AF
Sbjct: 396 YATELKEERLTHSDVAS-FQPQYSPDGKEVAF 426



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 32/60 (53%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V +      ++T     + +  +SPD  QI F SDR G   +Y++   G + +R++
Sbjct: 45  DIYTVPVAGGRATQVTTNPAYDTAPVWSPDGKQIAFASDRLGSMDVYLVAKEGGEPRRLT 104


>gi|85709083|ref|ZP_01040149.1| hypothetical protein NAP1_07570 [Erythrobacter sp. NAP1]
 gi|85690617|gb|EAQ30620.1| hypothetical protein NAP1_07570 [Erythrobacter sp. NAP1]
          Length = 661

 Score = 43.9 bits (102), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 1/85 (1%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           SP G+ IAF+     +  + VM   G   R +  ++ + AP W+P G +L +S  +DG+ 
Sbjct: 74  SPDGETIAFSWDITGQSELWVMPASGGVPRQVTFETGVGAPVWTPDGSALFYSADRDGNE 133

Query: 415 GSKLYSIDLNGRNETLINTPAYASD 439
               + +  +G +ET I  PA   D
Sbjct: 134 QPGYFVLTPDGMSETEI-LPAARGD 157



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 5/130 (3%)

Query: 309 YSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFT 364
           ++PD S + + +DR+G EQ   +V+  +G  +  I       +  F         + A T
Sbjct: 116 WTPDGSALFYSADRDGNEQPGYFVLTPDGMSETEILPAARGDFRIFGGFAEDGSFIYAST 175

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 F I     DG+ E L+  +  L A + SP+G+  I +    G+    LY +DL 
Sbjct: 176 ARGAGVFDIYRGTMDGASELLVESELGLAARSISPNGKYAIVTETV-GEDADNLYLLDLA 234

Query: 425 GRNETLINTP 434
            +  T I+ P
Sbjct: 235 TKEMTTISKP 244



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 4/80 (5%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT- 364
           +A+ SPD   I F  D  G+ +L+VM ++G   ++++   E     PVW+P G  + ++ 
Sbjct: 70  AANLSPDGETIAFSWDITGQSELWVMPASGGVPRQVT--FETGVGAPVWTPDGSALFYSA 127

Query: 365 -KFSGEKFAIGVMKKDGSQE 383
            +   E+    V+  DG  E
Sbjct: 128 DRDGNEQPGYFVLTPDGMSE 147


>gi|218265125|ref|ZP_03478707.1| hypothetical protein PRABACTJOHN_04417 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221580|gb|EEC94230.1| hypothetical protein PRABACTJOHN_04417 [Parabacteroides johnsonii
           DSM 18315]
          Length = 1088

 Score = 43.9 bits (102), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 4/87 (4%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S NG+    + + D    IY+V        +LT     +    +SPD S+IVF SDR
Sbjct: 29  PAISPNGETIAFTYKGD----IYTVPANGGKATQLTTHPAHDTRPVWSPDGSKIVFASDR 84

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASY 349
            G   ++VM   G   K+++      Y
Sbjct: 85  NGNFDIFVMDKEGGSPKQLTTHSANEY 111



 Score = 40.0 bits (92), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 55/138 (39%), Gaps = 14/138 (10%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SP+   I F      K  +Y + +NG    +++    A    PVWSP G  I F      
Sbjct: 32  SPNGETIAFTY----KGDIYTVPANGGKATQLTT-HPAHDTRPVWSPDGSKIVFASDRNG 86

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS---------KLYS 420
            F I VM K+G   + L   S  + P      + +++S     DT           ++Y 
Sbjct: 87  NFDIFVMDKEGGSPKQLTTHSANEYPETFSDAKHILYSAAIQQDTKDSQFPSGQFPQIYR 146

Query: 421 IDLNGRNETLINTPAYAS 438
           I L+G    L ++ A  S
Sbjct: 147 ISLDGGRPELYSSLAMES 164



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 9/69 (13%)

Query: 351 DPVW------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           DP+W      SP G+ IAFT + G+ +   V    G   +L    ++   P WSP G  +
Sbjct: 22  DPLWMRYPAISPNGETIAFT-YKGDIYT--VPANGGKATQLTTHPAHDTRPVWSPDGSKI 78

Query: 405 IFSRKKDGD 413
           +F+  ++G+
Sbjct: 79  VFASDRNGN 87


>gi|37676004|ref|NP_936400.1| hypothetical protein VVA0344 [Vibrio vulnificus YJ016]
 gi|37200544|dbj|BAC96370.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
           YJ016]
          Length = 1105

 Score = 43.9 bits (102), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 24/138 (17%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ S G +   ++     S  +P+WSP G+ IAFT    +
Sbjct: 64  SPDGQRIAFTY----AGQIWLIASKGGEAIPLTSADSYSE-NPIWSPDGESIAFTT---D 115

Query: 370 KFAIG----VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL------- 418
           +F  G    V    G  +RL    S      +SP G+ + F   + GD  S L       
Sbjct: 116 RFGPGDVFLVSANGGDAKRLTYHFSKDVPYAFSPDGQEVYFRSSRIGDIESSLNNGFAGS 175

Query: 419 -----YSIDLNGRNETLI 431
                YS+D++G  E L+
Sbjct: 176 ASAQIYSVDVSGGREKLL 193



 Score = 37.0 bits (84), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 23/115 (20%)

Query: 256 FRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            R + L+P      F+  G+  LI+ +  EA+ + S D  S              +  +S
Sbjct: 58  LRDIALSPDGQRIAFTYAGQIWLIASKGGEAIPLTSADSYSE-------------NPIWS 104

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLIAF 363
           PD   I F +DR G   ++++ +NG D KR++    K+  Y    +SP G  + F
Sbjct: 105 PDGESIAFTTDRFGPGDVFLVSANGGDAKRLTYHFSKDVPY---AFSPDGQEVYF 156


>gi|268318113|ref|YP_003291832.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Rhodothermus marinus DSM 4252]
 gi|262335647|gb|ACY49444.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Rhodothermus marinus DSM 4252]
          Length = 766

 Score = 43.9 bits (102), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 1/84 (1%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +  LY++ ++GS   R     + +   P W P+ D IAF +  G K  + V+   G +  
Sbjct: 75  RTHLYLVPTDGSTPPRAYTHGDRTASQPAWHPESDRIAFVRPVGGKPQLFVISLFGGEAE 134

Query: 385 LLVE-DSNLQAPTWSPSGRSLIFS 407
            L +       P WSP G  L+F+
Sbjct: 135 QLTDFRHGASRPRWSPDGSLLLFT 158



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++ P+S +I F     GK QL+V+   G + ++++  +  +   P WSP G L+ FT   
Sbjct: 103 AWHPESDRIAFVRPVGGKPQLFVISLFGGEAEQLTDFRHGAS-RPRWSPDGSLLLFTATL 161

Query: 368 GEK 370
            EK
Sbjct: 162 SEK 164


>gi|254517195|ref|ZP_05129252.1| X-Pro dipeptidyl-peptidase, S15 family [gamma proteobacterium
           NOR5-3]
 gi|219674033|gb|EED30402.1| X-Pro dipeptidyl-peptidase, S15 family [gamma proteobacterium
           NOR5-3]
          Length = 654

 Score = 43.9 bits (102), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 50/244 (20%), Positives = 95/244 (38%), Gaps = 37/244 (15%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  + +   DG     +T S D     PR+SP+ + +++     ED         R+   
Sbjct: 54  RTQIWMAPTDGGEAIPMT-SVDSSASRPRWSPDNKYLSFTASRGEDAKTQVWSLNRLGGD 112

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             ++ N +  +    +S +G R L++++     D    DL  +  +       I+     
Sbjct: 113 AMQVTNVKQGVSDFAWSPDGSRLLLTIK-----DARPADLTEDEDDDKPRPHVID----- 162

Query: 310 SPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRIS---QDKEASYFDPVWSPQGDLI 361
                +I F+ D +G     ++  YV         +I+    D E    DPVWSP G  +
Sbjct: 163 -----RIQFKQDYQGYIDRRRKHFYVYTPGDDAPVQITFGDYDDE----DPVWSPDGKSV 213

Query: 362 AFTKFSGEK---------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           AF     E          + + V  ++   +++  +    ++PTWSP G+S+ +      
Sbjct: 214 AFVSDRSENPDLYYGSNIWVVAVDDENHRLQKVTADSGKERSPTWSPDGQSIAYISSTGP 273

Query: 413 DTGS 416
           D G 
Sbjct: 274 DVGG 277


>gi|295135562|ref|YP_003586238.1| tricorn protease [Zunongwangia profunda SM-A87]
 gi|294983577|gb|ADF54042.1| tricorn protease [Zunongwangia profunda SM-A87]
          Length = 1081

 Score = 43.9 bits (102), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 6/98 (6%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   I F      K  LY + ++G D K+I+  K   Y  PVWS  G  +AF      
Sbjct: 33  SPDGETIAFTY----KGNLYTVATSGGDAKQITFHKAHDYM-PVWSKDGKQLAFASDRYG 87

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIF 406
            F + VM   G     L   SN + P ++S   +S+IF
Sbjct: 88  NFDVFVMDALGGPATRLTYHSNDEQPFSFSADNKSVIF 125


>gi|317051521|ref|YP_004112637.1| WD-40 repeat-containing protein [Desulfurispirillum indicum S5]
 gi|316946605|gb|ADU66081.1| WD-40 repeat-containing protein [Desulfurispirillum indicum S5]
          Length = 943

 Score = 43.9 bits (102), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 93/224 (41%), Gaps = 10/224 (4%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRS--MILAPRFSSNGKRALISVQKD 279
           Q +V +  +D     R  LM   + RA  R +   RS    L P+F     +  I   ++
Sbjct: 317 QDEVYFVRHDGHQ--RQQLMAYDVKRAQLRSVAPVRSSRFSLHPKFGILITQPAICNNRN 374

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             MDIY +D  S  + RLT        A+ +PD+  I+    + G+  L+++  +G   +
Sbjct: 375 WYMDIYHIDPDSGHSTRLTKCQRYRY-ATLTPDAEHIIAVQHQAGQSSLHLLNRDGVLLR 433

Query: 340 RISQDKEASY-FDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVEDSNLQA-PT 396
            + Q +        V  P  D +  + +  ++ + +       +Q   L+  + +QA P 
Sbjct: 434 ELWQGEPGEVPAHMVHHPHEDWLLISMWRQQQGWNLERFDLRTAQWTPLIRRAGIQAHPH 493

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           +   G  ++FS   DG      YS++ +G    L N    A  P
Sbjct: 494 FDHDGSHILFSSDSDGIYNIHQYSLE-SGETTVLTNVRGGAFHP 536


>gi|298243201|ref|ZP_06967008.1| peptidase S41 [Ktedonobacter racemifer DSM 44963]
 gi|297556255|gb|EFH90119.1| peptidase S41 [Ktedonobacter racemifer DSM 44963]
          Length = 1093

 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 70/183 (38%), Gaps = 31/183 (16%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D++ V  +    ER T  +       +SPD   + F    EG  ++YVM + G   +R++
Sbjct: 24  DLWVVRDEGGRAERWTAGVGEVSHPRFSPDGKFLAFVGREEGPSEVYVMSATGEPARRLT 83

Query: 343 -QDKEASYFDPVWSPQGDLIAFTKFSGE---KF-AIGVMKKDGSQERLL----------- 386
            Q          WSP G  I +   +G+   +F  I  +  +G   R L           
Sbjct: 84  FQGATCRVLG--WSPDGHEILYASNAGQFTPRFQTIFAISPEGGLPRALSYGMANAISYG 141

Query: 387 -----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                V   N++ P +        + R + G  G     ++ NG  + L+      +DP 
Sbjct: 142 SQGGVVLGRNIREPAY--------WKRYRGGTVGHLWCDVEGNGTFQRLLALDGNLADPC 193

Query: 442 WVG 444
           WVG
Sbjct: 194 WVG 196


>gi|258622162|ref|ZP_05717188.1| Periplasmic protease [Vibrio mimicus VM573]
 gi|258585486|gb|EEW10209.1| Periplasmic protease [Vibrio mimicus VM573]
          Length = 1085

 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 26/184 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           PRF+ +    L        + + +VD QS        T   +I+   SPD  QI F    
Sbjct: 4   PRFTLSSALVLTFFSTAPTLSLANVDTQSEVA-HAAPTWLRDIA--LSPDGKQIAFTY-- 58

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG---VMKKD 379
               Q++++ + G +   +++    S   PVWSP    +AFT     ++ +G   ++   
Sbjct: 59  --AGQIWLVPAQGGEAIALTESGIYSE-APVWSPDSQSLAFTT---NRYGMGDVFILAIQ 112

Query: 380 GSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDT-----------GSKLYSIDLNGRN 427
           G + R L        P  +S  G+ L FS ++ GD             ++LYS+ + G  
Sbjct: 113 GGESRRLTYHGAKDTPYAFSADGKQLYFSSRRLGDEKANANVKQGGFTAQLYSVPVTGGR 172

Query: 428 ETLI 431
           E L+
Sbjct: 173 EQLV 176


>gi|116622694|ref|YP_824850.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225856|gb|ABJ84565.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 853

 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 9/110 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FD--PVWSPQGDLIAFT 364
           ++S D  ++VFE       Q++V +++GS+ +R+    E  Y  D  P  S  G+ IAF+
Sbjct: 426 NFSGDGERLVFERG----HQIWVARTDGSEARRVEGVPEWYYGMDSLPALSAHGEWIAFS 481

Query: 365 KFS-GEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
           +   G    + V+   G + R L  D+ +   P W+P  + +I+S  + G
Sbjct: 482 RPQIGPHGDLWVIPSAGGKARRLTFDTRISTGPVWTPDDQWIIYSSMRGG 531



 Score = 40.8 bits (94), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 29/154 (18%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           SA++SPD S I F +   G  Q++V      D  +I+     +   P WSP+ D I F++
Sbjct: 342 SATFSPDGSMIAFLNTANGPAQIWVKNLAQGDPIQITSGNLPA-VQPHWSPKNDQIVFSR 400

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-------KKDGDTGSKL 418
              +   I  +   G   R L+     + P +S  G  L+F R       + DG    ++
Sbjct: 401 ---QGQGIWSVPPLGGTPRQLIRPG--RNPNFSGDGERLVFERGHQIWVARTDGSEARRV 455

Query: 419 -------YSIDLNGRNETLINTPAYASDPQWVGF 445
                  Y +D         + PA ++  +W+ F
Sbjct: 456 EGVPEWYYGMD---------SLPALSAHGEWIAF 480


>gi|163846645|ref|YP_001634689.1| peptidase S9 prolyl oligopeptidase [Chloroflexus aurantiacus
           J-10-fl]
 gi|222524445|ref|YP_002568916.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Chloroflexus sp. Y-400-fl]
 gi|163667934|gb|ABY34300.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Chloroflexus aurantiacus J-10-fl]
 gi|222448324|gb|ACM52590.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Chloroflexus sp. Y-400-fl]
          Length = 678

 Score = 43.5 bits (101), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 8/99 (8%)

Query: 351 DPVWSPQGDLIAFTKFS------GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           DP  SP G  +A    +      G +  I ++  DG Q R        + P WSP GR +
Sbjct: 22  DPRLSPDGRYVAVVWVTVDRVGNGYRRHIVLVATDGGQIRRFTRGKQDRQPRWSPDGRWI 81

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQW 442
            F   +D + G ++Y I ++G     I + P  ASDP W
Sbjct: 82  AFVSNRDDERG-QIYIIPVDGGEARQITSHPNGASDPAW 119



 Score = 43.1 bits (100), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 14/104 (13%)

Query: 348 SYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPS 400
           SYFDP  SP G  IAF + +     GE   + ++   G +   L    D N++   W P 
Sbjct: 268 SYFDPRPSPDGTQIAFLRLNESRLLGEGKRVAIIPATGGEPHDLTAHTDLNVEQFHWQPD 327

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNG----RN-ETLINTPAYASD 439
           G+ ++FS    GD  + +Y I L G    RN  TL+  P   S+
Sbjct: 328 GQGVLFSAGWRGD--AHVYQIGLPGTPTYRNGATLVGGPRIVSE 369



 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 7/107 (6%)

Query: 263 PRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFI----NISASYSPDSSQIV 317
           PR S +G+  A++ V  D   + Y   +   AT+      F     +    +SPD   I 
Sbjct: 23  PRLSPDGRYVAVVWVTVDRVGNGYRRHIVLVATDGGQIRRFTRGKQDRQPRWSPDGRWIA 82

Query: 318 FESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           F S+R+ +  Q+Y++  +G + ++I+     +  DP WSP G  IAF
Sbjct: 83  FVSNRDDERGQIYIIPVDGGEARQITSHPNGAS-DPAWSPDGRYIAF 128



 Score = 40.8 bits (94), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQE 383
           +  + ++ ++G   +R ++ K+     P WSP G  IAF +    E+  I ++  DG + 
Sbjct: 47  RRHIVLVATDGGQIRRFTRGKQDR--QPRWSPDGRWIAFVSNRDDERGQIYIIPVDGGEA 104

Query: 384 RLLVEDSNLQA-PTWSPSGRSLIF 406
           R +    N  + P WSP GR + F
Sbjct: 105 RQITSHPNGASDPAWSPDGRYIAF 128


>gi|94967925|ref|YP_589973.1| hypothetical protein Acid345_0896 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549975|gb|ABF39899.1| hypothetical protein Acid345_0896 [Candidatus Koribacter versatilis
           Ellin345]
          Length = 656

 Score = 43.5 bits (101), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 11/120 (9%)

Query: 310 SPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + D+ Q+VF +     + +L+V+ +   +   I   +      P +SP G  +A+ KFS 
Sbjct: 543 AADNGQLVFSALTGHHRMELFVLSNGKPEPLHIENARF-----PAFSPDGRWLAYAKFSN 597

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             + + + K D   ER L   S  QA P W    ++LI++     D G  L+   L  R+
Sbjct: 598 SSWHLTLRKLDNGNERHLGTASCNQAYPAWVRDSQTLIYA----SDCGRGLWQTTLESRS 653


>gi|269928432|ref|YP_003320753.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269787789|gb|ACZ39931.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 649

 Score = 43.5 bits (101), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 9/110 (8%)

Query: 310 SPDSSQIVF---ESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD +QI++     DRE   G  Q+++   +GS+ +R++   E +    VWSP G  IAF
Sbjct: 23  SPDGTQILYTLSAVDRETKKGSSQIWLCGIDGSNPRRLTWSGERNSGG-VWSPDGRRIAF 81

Query: 364 TKFSGEKFAIGVMKKD--GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                EK  I V+  D  G    +   +  +    WSP G  + ++   D
Sbjct: 82  VSNRVEKAGIFVLDLDRPGEAREITRHNQAISDLAWSPDGTRIAYTTTFD 131



 Score = 40.4 bits (93), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 6/113 (5%)

Query: 258 SMILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +M   P+ S +G + L ++       K  +  I+   +  +   RLT +   N    +SP
Sbjct: 15  TMAGEPQVSPDGTQILYTLSAVDRETKKGSSQIWLCGIDGSNPRRLTWSGERNSGGVWSP 74

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           D  +I F S+R  K  ++V+  +   + R       +  D  WSP G  IA+T
Sbjct: 75  DGRRIAFVSNRVEKAGIFVLDLDRPGEAREITRHNQAISDLAWSPDGTRIAYT 127


>gi|152965662|ref|YP_001361446.1| hypothetical protein Krad_1696 [Kineococcus radiotolerans SRS30216]
 gi|151360179|gb|ABS03182.1| WD40 domain protein beta Propeller [Kineococcus radiotolerans
           SRS30216]
          Length = 285

 Score = 43.5 bits (101), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 17/153 (11%)

Query: 283 DIYSVDLQSNATER-LTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           D++ +   + AT R LT+T L +    S+SPD   + +   REG   +  + +  S + R
Sbjct: 122 DLFLISAGTGATVRKLTSTRLIVESDPSFSPDGKSVAYR--REGAIWIQTIATGQSIRWR 179

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-------IGVMKKDGSQERLLVEDSNLQ 393
           +         +P +SP G  IA+  + G++ A       I      G   +  + D+N  
Sbjct: 180 VGA------INPQYSPDGTKIAYQVYEGDEPAYNRGDGRIWYAPVTGGTPKDTLIDANAD 233

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              WSP G +  FS    G+    ++     GR
Sbjct: 234 DFVWSPDGTAFAFSAASTGENAYTIFLARTTGR 266


>gi|282878207|ref|ZP_06287003.1| WD40-like protein [Prevotella buccalis ATCC 35310]
 gi|281299625|gb|EFA91998.1| WD40-like protein [Prevotella buccalis ATCC 35310]
          Length = 1068

 Score = 43.5 bits (101), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY--VMQSNGSDQKR 340
           D+Y  +++   T+++T+T     S  +SPD   IV+ S+REG  Q+Y   M++    Q  
Sbjct: 331 DVYVTNIEYKTTKQITDTPEQERSIEFSPDGLAIVYASEREGLWQIYQTTMKNKAEKQFA 390

Query: 341 ISQDKE------ASY--FDPVWSPQGDLIAF 363
            + D +      ++Y  F P +SP G  IAF
Sbjct: 391 YATDLQEERLIHSAYTSFQPQYSPDGKSIAF 421



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 6/110 (5%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN L++    S SPD   I F      K  ++ + ++G   ++++ +     + P+WSP 
Sbjct: 20  TNPLWMR-HTSISPDGQTIAFSY----KGDVFTVPASGGQARQLTSNAAYDSY-PIWSPD 73

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           G  IAF         I VM K G + + L   S  + P        ++FS
Sbjct: 74  GKKIAFASSREGSLDIFVMDKFGGEPKRLTTRSTNETPIAWRDNEHILFS 123



 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 31/60 (51%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+++V        +LT+    +    +SPD  +I F S REG   ++VM   G + KR++
Sbjct: 44  DVFTVPASGGQARQLTSNAAYDSYPIWSPDGKKIAFASSREGSLDIFVMDKFGGEPKRLT 103


>gi|298244880|ref|ZP_06968686.1| Acylaminoacyl-peptidase [Ktedonobacter racemifer DSM 44963]
 gi|297552361|gb|EFH86226.1| Acylaminoacyl-peptidase [Ktedonobacter racemifer DSM 44963]
          Length = 695

 Score = 43.5 bits (101), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 102/230 (44%), Gaps = 29/230 (12%)

Query: 220 SPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMILA------PRFSSNGK 270
           SP+ ++VA+  +    +ED LR  L   R+D   +  G  R +  +      P ++ + +
Sbjct: 24  SPDGRRVAFEMHYAEREEDTLRSALYLLRLDEQGQAEGEPRQLTRSVKSESFPTWAPDSR 83

Query: 271 RAL-ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--ESDREGKEQ 327
           R L +S ++ E   ++ +D       +LT  L     A++SPD   I F   ++ E ++ 
Sbjct: 84  RLLFLSDREGEQNQLWLIDTDGGEARKLTTMLHGVNEATWSPDGRWIAFAASAELEDEDD 143

Query: 328 LYVMQSNGSDQKRISQDKEASYF-----DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS- 381
           L V   + S+ +R  +D+E  Y      DP +   G    +       FA+    ++GS 
Sbjct: 144 LLVGLKSLSESERKKRDEERRYRLRVVNDPDYRSDGR--GYYDTQAHLFAMPAPGENGSV 201

Query: 382 ---QERLLVEDSNLQA-PTWSPSGRSL--IFSRKKDGDTG---SKLYSID 422
              Q R L       A P W+P  + +  + +R++D   G     L++ID
Sbjct: 202 DPAQIRRLTRGRYEHAQPVWTPDSQEIGVLSNRREDRFMGIWVRDLWAID 251


>gi|116624299|ref|YP_826455.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227461|gb|ABJ86170.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 931

 Score = 43.5 bits (101), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 93/231 (40%), Gaps = 27/231 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-V 276
           RF+P+ + V YA   +   + ++ M      + + +G   + +L+   S  G+ A+ S  
Sbjct: 413 RFAPDGRSVIYAATFEGQAVELFSMQPGSPESSRPLGFSSTGVLS--ISRTGEMAVSSNC 470

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + D   D      Q          +  N+ SA + PD  Q+              M++  
Sbjct: 471 RIDFWGDCVGTLAQKPVAGGAPREILGNVRSADWMPDGKQLAVS-----------MRAAN 519

Query: 336 SDQKRISQDKEASYF---------DPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQER 384
             ++R+        F         DP  SP GDL+AF    + G   ++ V+   G +  
Sbjct: 520 GKRERLEFPIGKVLFEASGTGWAGDPRVSPGGDLVAFADHYYFGNDGSVAVVDLQGHRRT 579

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           L  +   LQ   WS  G+ + F+   +G+  S +Y++ L+G    +   PA
Sbjct: 580 LTRKFQCLQGLAWSLGGKEIWFTGCNEGNLAS-IYAVTLSGALRLVAQVPA 629


>gi|312199549|ref|YP_004019610.1| serine/threonine protein kinase [Frankia sp. EuI1c]
 gi|311230885|gb|ADP83740.1| serine/threonine protein kinase [Frankia sp. EuI1c]
          Length = 744

 Score = 43.5 bits (101), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 53/119 (44%), Gaps = 19/119 (15%)

Query: 308 SYSPDSSQIVFES--DREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           S SPD   +V  S  D+ G+    LY+   +G   +R+    EAS  DP WSP G+ IA+
Sbjct: 539 SLSPDGKFLVLRSTTDQTGQPNPGLYISSIDGKTVRRLDTQPEAS--DPSWSPDGERIAY 596

Query: 364 ----TKFSGEKFAIGVMKKDGSQERLLVED--------SNLQA-PTWSPSGRSLIFSRK 409
                   G  F + +    G       +D         NL + PTWSP G+ L F R+
Sbjct: 597 WSNTVAGGGGGFLVLISTIPGQAAVPFNKDEFISEGDKPNLDSEPTWSPDGKYLAFVRQ 655


>gi|282880946|ref|ZP_06289637.1| WD40-like protein [Prevotella timonensis CRIS 5C-B1]
 gi|281305169|gb|EFA97238.1| WD40-like protein [Prevotella timonensis CRIS 5C-B1]
          Length = 1068

 Score = 43.5 bits (101), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY--VMQSNGSDQKR 340
           D+Y  +++   T+++T+T     S  +SPD   IV+ S+REG  Q+Y   M++    Q  
Sbjct: 331 DVYVTNIEYKTTKQITDTPEQERSIEFSPDGLAIVYASEREGLWQIYQTTMKNKAEKQFA 390

Query: 341 ISQDKE------ASY--FDPVWSPQGDLIAF 363
            + D +      ++Y  F P +SP G  IAF
Sbjct: 391 YATDLQEERLIHSAYTSFQPQYSPDGKSIAF 421



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 31/60 (51%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+++V        +LT+    +    +SPD  +I F S REG   +YVM   G + KR++
Sbjct: 44  DVFTVPASGGQARQLTSNAAYDSYPIWSPDGKKIAFASSREGSLDIYVMDKFGGEPKRLT 103



 Score = 37.4 bits (85), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 6/110 (5%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +N L++    S SPD   I F      K  ++ + ++G   ++++ +     + P+WSP 
Sbjct: 20  SNPLWMR-HTSISPDGQTIAFSY----KGDVFTVPASGGQARQLTSNAAYDSY-PIWSPD 73

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           G  IAF         I VM K G + + L   S  + P        ++FS
Sbjct: 74  GKKIAFASSREGSLDIYVMDKFGGEPKRLTTRSTNETPIAWRDNEHILFS 123


>gi|299139848|ref|ZP_07033020.1| peptidase S41 [Acidobacterium sp. MP5ACTX8]
 gi|298598202|gb|EFI54368.1| peptidase S41 [Acidobacterium sp. MP5ACTX8]
          Length = 1127

 Score = 43.5 bits (101), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 60/132 (45%), Gaps = 8/132 (6%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A DI+ V     A  RLT+T  I     +SPD + I + +   G   +Y + + G   KR
Sbjct: 44  ADDIWLVSRDGGAARRLTSTSNITDGPFFSPDGNTIAYSATAAGNTDIYTIPATGGAPKR 103

Query: 341 ISQDKEASYFDPVWSPQG-DLIAFTKFSGEK--FAIGVMKKDGS--QERLLVEDSNLQAP 395
           I+     +Y    W+P G DL+  +  +  +  F +  +  DGS   ERL +  +     
Sbjct: 104 ITYRPGGNYVT-GWTPDGHDLLMQSMQNAVRVYFQLYRVHADGSGLPERLPLPSAWYG-- 160

Query: 396 TWSPSGRSLIFS 407
           T SP G  L ++
Sbjct: 161 TLSPDGSHLAYN 172



 Score = 41.6 bits (96), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 9/146 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDRE 323
            S  G RA+     D    I++V  +      LTN+      + ++SPD  +I + SD  
Sbjct: 315 ISPTGVRAVFEAHGD----IFTVPAEKGDVRNLTNSSGSAERAPAWSPDGKRIAYFSDAT 370

Query: 324 GKEQLYVMQSNG-SDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           G+ +LY+   +G S  K I    + + Y+ P WSP    I F+      + + V    G 
Sbjct: 371 GEYKLYLRDQDGLSAPKVIDLGPDPTYYYSPTWSPDSKRIVFSDKRLNLWYVNVDPALGP 430

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFS 407
            + + V D++L+   + P+G S  FS
Sbjct: 431 AKPIKV-DTDLRE-GFGPAGFSASFS 454



 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 24/109 (22%), Positives = 53/109 (48%), Gaps = 8/109 (7%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A  SP   + VFE+  +    ++ + +   D + ++    ++   P WSP G  IA+  
Sbjct: 312 NADISPTGVRAVFEAHGD----IFTVPAEKGDVRNLTNSSGSAERAPAWSPDGKRIAYFS 367

Query: 366 FSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKK 410
            +  ++ + +  +DG     ++    + +   +PTWSP  + ++FS K+
Sbjct: 368 DATGEYKLYLRDQDGLSAPKVIDLGPDPTYYYSPTWSPDSKRIVFSDKR 416



 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 15/175 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRS 258
            ++R LT S       P +SP+ +++AY + D     ++YL D     APK I  G   +
Sbjct: 338 GDVRNLTNSSGSAERAPAWSPDGKRIAYFS-DATGEYKLYLRDQDGLSAPKVIDLGPDPT 396

Query: 259 MILAPRFSSNGKRALIS--------VQKDEAMD-IYSVDLQSNATERLTNTLFINISASY 309
              +P +S + KR + S        V  D A+     + + ++  E      F   SAS+
Sbjct: 397 YYYSPTWSPDSKRIVFSDKRLNLWYVNVDPALGPAKPIKVDTDLREGFGPAGF---SASF 453

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           SPDS  I++       E    + S  + +     D  +   +PV+   G  + FT
Sbjct: 454 SPDSQWILYARSLPSLEDAAFLYSIATGKTTQITDGMSHVTNPVFDKSGKYLYFT 508


>gi|269836774|ref|YP_003319002.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269786037|gb|ACZ38180.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 655

 Score = 43.5 bits (101), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 50/245 (20%), Positives = 89/245 (36%), Gaps = 43/245 (17%)

Query: 210 RDQILFEPRFSPNQQKVAYAT---YDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRF 265
           R  ++ +P+ SP+   VA+     Y  E+  R  +    +    P+ +    +    PR+
Sbjct: 13  RIAMVSDPQVSPDGTLVAFVVTRMYRKENCYRSGIWTVPVAGGEPRPLTAGTARDSTPRW 72

Query: 266 SSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---- 320
           S +G+  A +S +  +   ++ +        +LTN         +SP    + F S    
Sbjct: 73  SPDGRWLAFLSTRGGDKPQLWYLPADGGEARQLTNLPEGVEQPVWSPRGDALAFVSKVGP 132

Query: 321 ------------------DREG-----KEQLYVMQSNGSD----QKRISQDKEASYFDPV 353
                             D EG       Q++V+  + S+    + R   D    + DP 
Sbjct: 133 EKQSDSDVRVIRTIRYRFDGEGFLDDKYRQIWVVPFDPSNPSMPEARQITDGPYEHRDPA 192

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMK-------KDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           WSP G  IAFT      + +GV++         G   ++         P WSP G ++  
Sbjct: 193 WSPTGHEIAFTAARHPDWELGVLQDIWAVSAAGGPPRKITCAPGAWSEPVWSPDGTTIAL 252

Query: 407 SRKKD 411
               D
Sbjct: 253 LGPSD 257



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 38/99 (38%), Gaps = 7/99 (7%)

Query: 351 DPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRS 403
           DP  SP G L+AF       K +  +  I  +   G + R L   +   + P WSP GR 
Sbjct: 19  DPQVSPDGTLVAFVVTRMYRKENCYRSGIWTVPVAGGEPRPLTAGTARDSTPRWSPDGRW 78

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           L F   + GD     Y     G    L N P     P W
Sbjct: 79  LAFLSTRGGDKPQLWYLPADGGEARQLTNLPEGVEQPVW 117


>gi|255015929|ref|ZP_05288055.1| putative Tricorn-like protease [Bacteroides sp. 2_1_7]
          Length = 1076

 Score = 43.5 bits (101), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 27/198 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NGK      + D    +Y   ++   T ++TNT     +  +SPD   +V+ ++REG 
Sbjct: 323 SPNGKEVAFITRGD----VYVTSIEYETTRQITNTPQQERNIDFSPDGRSLVYSAEREGT 378

Query: 326 EQLYVMQSNGSDQKRISQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             +Y  +    + K+ +   E           + F P++SP G+ +AF +    +  + V
Sbjct: 379 WGIYESKLTRDEDKQFTYAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLE---NRTTLRV 435

Query: 376 MKKDGSQERLLVEDSNL-------QAPTWSPSGRSLIFSRKKDG---DTGSKLYSIDLNG 425
           + +   Q R +++   L       Q   WSP  +  +      G   +T   L   D +G
Sbjct: 436 INRKTKQVRTVLDGKYLYSYSDGDQHFQWSPDSKWFLVDYISVGGWNNTDIALVKADGSG 495

Query: 426 RNETLINTPAYASDPQWV 443
               L  +     D +WV
Sbjct: 496 EVTNLTESGYSDGDAKWV 513



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + SPD   I F    +    +Y + S+G   ++++    A    PVWSP G  IAF   
Sbjct: 29  CAISPDGQTIAFSYQGD----IYTVPSSGGKARQLTT-HPAHDTRPVWSPDGQRIAFASN 83

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               F I +M K+G + + L   S  + PT
Sbjct: 84  RSGNFDIFLMNKEGGEPKRLTTHSTNEYPT 113



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V        +LT     +    +SPD  +I F S+R G   +++M   G + KR++
Sbjct: 45  DIYTVPSSGGKARQLTTHPAHDTRPVWSPDGQRIAFASNRSGNFDIFLMNKEGGEPKRLT 104

Query: 343 QDKEASY 349
                 Y
Sbjct: 105 THSTNEY 111


>gi|255558604|ref|XP_002520327.1| conserved hypothetical protein [Ricinus communis]
 gi|223540546|gb|EEF42113.1| conserved hypothetical protein [Ricinus communis]
          Length = 540

 Score = 43.5 bits (101), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 37/231 (16%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA- 249
           + + V++ DG + R + P    + F   + P++  V Y++           + T  D   
Sbjct: 274 SGIYVVNPDGLHRRMVYPG---LAFPTIWDPDRPGVVYSSTGPAFASATTQLTTNGDNNA 330

Query: 250 -PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            P R+G+   + L         R    V+    MD  +V+ +     R+   L+ +    
Sbjct: 331 FPDRMGD--GLCLG--------RVFRVVRTLYIMD--AVEGEKGGLYRVIEGLWDDTMCD 378

Query: 309 YSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAF 363
           +SPD   IVF SDRE    G   LY +  NG+  +++ Q       + ++ SP G  I F
Sbjct: 379 WSPDGEWIVFCSDREEPGTGSFDLYFIHPNGTGLRKLLQSGSGGRVNHLYISPNGKSIVF 438

Query: 364 ----TKFSGEKFA----------IGVMKKDGSQERLLVEDS-NLQAPTWSP 399
               T  S E  +          I ++  DGS  + L  +S     P W P
Sbjct: 439 TTDYTAISAEPISNQQMFQPYGEIYIINLDGSGLKRLTHNSFEDGTPAWGP 489


>gi|298244157|ref|ZP_06967963.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297551638|gb|EFH85503.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 614

 Score = 43.5 bits (101), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 28/213 (13%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-----DLQSNATERLTNTLFINI 305
           +R  N RS   A  FS +G+            +++SV     +LQ  A  R        +
Sbjct: 9   ERYLNVRSATGA-SFSPDGQHISFLTNITGVAEVWSVSIDQPNLQEPAWPRQLTFRGERV 67

Query: 306 S-ASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           S A+++P +  ++   D  G E  QL+++ ++GS+ + +++  E  +    WSP G+ I 
Sbjct: 68  SGATFAPHADTLLVSGDIGGNERAQLFLLSADGSEFRALTEKPEVMHSFGGWSPDGERIV 127

Query: 363 FTKFSGEK----FAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKK------- 410
           +   S E+    F +  M+    + RLL+E      P  +SP G+ ++  R +       
Sbjct: 128 YN--SNERDARFFDVYEMQVSTGECRLLLEQDGSNMPVRYSPDGKQVLVRRVESLSRNAL 185

Query: 411 ---DGDTG-SKLYSIDLNGRNETLINTPAYASD 439
              D D+G ++  + DL G    L  TP +++D
Sbjct: 186 ILIDIDSGEARDLTPDL-GEGAALHATPFWSAD 217


>gi|262384211|ref|ZP_06077347.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295109|gb|EEY83041.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 1076

 Score = 43.5 bits (101), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 23/181 (12%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y   ++   T ++TNT     +  +SPD   +V+ ++REG   +Y  +    + K+ +
Sbjct: 336 DVYVTSIEYETTRQITNTPQQERNIDFSPDGRSLVYSAEREGTWGIYESKLTRDEDKQFT 395

Query: 343 QDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
              E           + F P++SP G+ +AF +    +  + V+ +   Q R +++   L
Sbjct: 396 YAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLE---NRTTLRVINRKTKQVRTVLDGKYL 452

Query: 393 -------QAPTWSPSGRSLIFSRKKDG---DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                  Q   WSP  +  +      G   +T   L   D +G    L  +     D +W
Sbjct: 453 YSYSDGDQHFQWSPDSKWFLVDYISIGGWNNTDIALVKADGSGEVTNLTESGYSDGDAKW 512

Query: 443 V 443
           V
Sbjct: 513 V 513



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + SPD   I F    +    +Y + S+G   ++++    A    PVWSP G  IAF   
Sbjct: 29  CAISPDGQTIAFSYQGD----IYTVPSSGGKARQLTT-HPAHDTRPVWSPDGQRIAFASN 83

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               F + +M K+G + + L   S  + PT
Sbjct: 84  RSGNFDVFLMNKEGGEPKRLTTHSTNEYPT 113



 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V        +LT     +    +SPD  +I F S+R G   +++M   G + KR++
Sbjct: 45  DIYTVPSSGGKARQLTTHPAHDTRPVWSPDGQRIAFASNRSGNFDVFLMNKEGGEPKRLT 104

Query: 343 QDKEASY 349
                 Y
Sbjct: 105 THSTNEY 111


>gi|254881960|ref|ZP_05254670.1| prolyl oligopeptidase [Bacteroides sp. 4_3_47FAA]
 gi|319641035|ref|ZP_07995740.1| prolyl oligopeptidase [Bacteroides sp. 3_1_40A]
 gi|254834753|gb|EET15062.1| prolyl oligopeptidase [Bacteroides sp. 4_3_47FAA]
 gi|317387345|gb|EFV68219.1| prolyl oligopeptidase [Bacteroides sp. 3_1_40A]
          Length = 706

 Score = 43.5 bits (101), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 10/146 (6%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S S SPD  QI +        + +    +YVM ++G +   ++Q    +  +P W   G 
Sbjct: 58  SLSISPDGKQIAYTVAYYSVPENKSHHVIYVMDADGKNNTLLTQ-TAWNESEPQWIKGGT 116

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF-SRKKDGDTGSK 417
            IAF         I  M  DG++ R++ +   N++  ++SP G+ ++F S+ K G     
Sbjct: 117 KIAFLCNESGGSQIWEMNPDGTERRIISDFKGNIEGFSFSPDGKKILFISQIKYGQRTVD 176

Query: 418 LYSIDLNGRNETLINTPAYASDPQWV 443
           LY  DL   +  ++N   Y    +WV
Sbjct: 177 LYP-DLPKASGIIVNDLMYKHWDEWV 201


>gi|317475671|ref|ZP_07934931.1| hypothetical protein HMPREF1016_01913 [Bacteroides eggerthii
           1_2_48FAA]
 gi|316908127|gb|EFV29821.1| hypothetical protein HMPREF1016_01913 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 1086

 Score = 43.5 bits (101), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 14/109 (12%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S NGK     ++ D    +Y   +    T+++TNT        ++PD   +V+ S+R G
Sbjct: 322 LSPNGKEVAFVLRGD----VYVTSVDYKTTKQVTNTPCQERGVDFAPDGRSLVYASERGG 377

Query: 325 KEQLYVMQSNGSDQKRISQDKE----------ASYFDPVWSPQGDLIAF 363
             QLY       D+K  +   E          A+ F P +SP G  +AF
Sbjct: 378 LWQLYTSAIVRKDEKLFTYATELKEERLTNSDAASFQPQYSPDGKEVAF 426



 Score = 40.4 bits (93), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 31/60 (51%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V +      +LT     +    +SPD  +I F SDR G   +Y++   G + +R++
Sbjct: 45  DIYTVPVDGGRAMQLTTNPAHDTEPVWSPDGKRIAFASDRMGSMDVYIVSKEGGEPRRLT 104



 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 18/125 (14%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + SPD + I F      K  +Y +  +G    +++ +  A   +PVWSP G  IAF   
Sbjct: 29  CAISPDGTTIAFTY----KGDIYTVPVDGGRAMQLTTNP-AHDTEPVWSPDGKRIAFASD 83

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 + ++ K+G + R L   S  + P        + FS     D G  L+S D+   
Sbjct: 84  RMGSMDVYIVSKEGGEPRRLTTHSGSETP--------VAFS-----DAGHILFSADIMPS 130

Query: 427 NETLI 431
            ET++
Sbjct: 131 AETVL 135


>gi|298376888|ref|ZP_06986842.1| MdsD protein [Bacteroides sp. 3_1_19]
 gi|298265872|gb|EFI07531.1| MdsD protein [Bacteroides sp. 3_1_19]
          Length = 1076

 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 27/198 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NGK      + D    +Y   ++   T ++TNT     +  +SPD   +V+ ++REG 
Sbjct: 323 SPNGKEVAFITRGD----VYVTSIEYETTRQITNTPQQERNIDFSPDGRSLVYSAEREGT 378

Query: 326 EQLYVMQSNGSDQKRISQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             +Y  +    + K+ +   E           + F P++SP G+ +AF +    +  + V
Sbjct: 379 WGIYESKLTRDEDKQFTYAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLE---NRTTLRV 435

Query: 376 MKKDGSQERLLVEDSNL-------QAPTWSPSGRSLIFSRKKDG---DTGSKLYSIDLNG 425
           + +   Q R +++   L       Q   WSP  +  +      G   +T   L   D +G
Sbjct: 436 INRKTKQVRTVLDGKYLYSYSDGDQHFQWSPDSKWFLVDYISVGGWNNTDIALVKADGSG 495

Query: 426 RNETLINTPAYASDPQWV 443
               L  +     D +WV
Sbjct: 496 EVTNLTESGYSDGDAKWV 513



 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + SPD   I F    +    +Y + S+G   ++++    A    PVWSP G  IAF   
Sbjct: 29  CAISPDGQTIAFSYQGD----IYTVPSSGGKARQLTT-HPAHDTRPVWSPDGQKIAFASN 83

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               F + +M K+G + + L   S  + PT
Sbjct: 84  RSGNFDVFLMNKEGGEPKRLTTHSTNEYPT 113



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V        +LT     +    +SPD  +I F S+R G   +++M   G + KR++
Sbjct: 45  DIYTVPSSGGKARQLTTHPAHDTRPVWSPDGQKIAFASNRSGNFDVFLMNKEGGEPKRLT 104

Query: 343 QDKEASY 349
                 Y
Sbjct: 105 THSTNEY 111


>gi|295798165|emb|CAX69026.1| hypothetical protein, TolB-like family [uncultured bacterium]
          Length = 947

 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 14/84 (16%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------------- 326
           E + IY ++L++ A  +LT   + ++  +Y+P+   IVF S+R G               
Sbjct: 264 EPIHIYEMNLKNGALRQLTRGEWSDLDPTYAPNG-DIVFVSERCGTSLQCNEYDKDETSC 322

Query: 327 QLYVMQSNGSDQKRISQDKEASYF 350
            LYVM+ +GS  +R+S +K+  Y 
Sbjct: 323 NLYVMKPDGSGIRRLSANKDGDYL 346


>gi|253567152|ref|ZP_04844602.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251943983|gb|EES84502.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 1095

 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y   ++   T+++TNT        ++PD   +V+ S+R G  QLY       D+K+ +
Sbjct: 336 DVYVTSVEYKTTKQVTNTPCQERGIDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKQFT 395

Query: 343 QDKE----------ASYFDPVWSPQGDLIAF 363
              E           + F+P +SP G  IAF
Sbjct: 396 YATELKEERLTNSDVASFNPKYSPDGKEIAF 426



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 34/60 (56%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI++V +      ++T     + +  +SPDS QI F SDR G   ++++  +G + +R++
Sbjct: 45  DIFTVPVSGGKATQITTNPAFDTTPIWSPDSKQIAFASDRMGSMDVFIVSKDGGEPRRLT 104


>gi|242046452|ref|XP_002461097.1| hypothetical protein SORBIDRAFT_02g040640 [Sorghum bicolor]
 gi|241924474|gb|EER97618.1| hypothetical protein SORBIDRAFT_02g040640 [Sorghum bicolor]
          Length = 669

 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 7/84 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTK 365
           + SP    +VF S R G + LYV+ +   +   + +  E  + D  P WSP G LIAF+ 
Sbjct: 469 AVSPCGRWLVFRSGRTGHKNLYVVDTARGEDGGVLRLTEGEWIDTMPSWSPDGSLIAFSS 528

Query: 366 FSGEK-----FAIGVMKKDGSQER 384
              +      F+I +++ DGS  R
Sbjct: 529 NRHDPANPAVFSIYLVRPDGSGLR 552



 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 28/138 (20%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-- 365
           S+SPD++ +    D      + V++S+GS  KR +  KE + F   WSP    + FT   
Sbjct: 361 SFSPDAAHLAVNGDFFMTPGIRVLRSDGS--KRWTVSKEPNLFYTTWSPTEPGVVFTSMG 418

Query: 366 --FSGEKFAIGVMKKDGSQERLLVEDSNLQA------------------PTWSPSGRSLI 405
             F   K  + + + +     L  +DS ++                   P  SP GR L+
Sbjct: 419 PIFETTKATVRIARVEFDPADLTDDDSRVEVGVATVRPLTRPEAGNDAFPAVSPCGRWLV 478

Query: 406 FSRKKDGDTGSK-LYSID 422
           F   + G TG K LY +D
Sbjct: 479 F---RSGRTGHKNLYVVD 493


>gi|320158147|ref|YP_004190525.1| protease-related protein [Vibrio vulnificus MO6-24/O]
 gi|319933459|gb|ADV88322.1| protease-related protein [Vibrio vulnificus MO6-24/O]
          Length = 1088

 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 24/138 (17%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ S G +   ++     S  +P+WSP G+ IAFT    +
Sbjct: 47  SPDGQRIAFTY----AGQIWLIASKGGEAIPLTSADSYSE-NPIWSPDGESIAFTT---D 98

Query: 370 KFAIG----VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD------------ 413
           +F  G    V    G  +RL    S      +SP G+ + F   + GD            
Sbjct: 99  RFGPGDVFLVSANGGDAKRLTYHFSKDVPYAFSPDGQEVYFRSSRIGDIESSVNNGFAGS 158

Query: 414 TGSKLYSIDLNGRNETLI 431
             +++YS+D++G  E L+
Sbjct: 159 ASAQIYSVDVSGGREKLL 176



 Score = 37.0 bits (84), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 23/115 (20%)

Query: 256 FRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            R + L+P      F+  G+  LI+ +  EA+ + S D  S              +  +S
Sbjct: 41  LRDIALSPDGQRIAFTYAGQIWLIASKGGEAIPLTSADSYSE-------------NPIWS 87

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLIAF 363
           PD   I F +DR G   ++++ +NG D KR++    K+  Y    +SP G  + F
Sbjct: 88  PDGESIAFTTDRFGPGDVFLVSANGGDAKRLTYHFSKDVPY---AFSPDGQEVYF 139


>gi|319902329|ref|YP_004162057.1| WD40-like beta Propeller containing protein [Bacteroides helcogenes
           P 36-108]
 gi|319417360|gb|ADV44471.1| WD40-like beta Propeller containing protein [Bacteroides helcogenes
           P 36-108]
          Length = 716

 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 75/166 (45%), Gaps = 19/166 (11%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-----NISASY 309
           N   M  A   +S G     + Q+D A  I   D++          L+      N++ S 
Sbjct: 5   NLLLMSAAMTLASCGGGTKDAEQQDTAALINRSDIKIEGKRMTPEALWAMGRIGNVTVS- 63

Query: 310 SPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLI 361
            PD  QI +        + +   +++VM ++G   ++I+++  +E+    PVW   G  I
Sbjct: 64  -PDEKQIAYSVAYYSVPENKSNNEIFVMNADGGSNRQITRNVWQESQ---PVWIKDGKKI 119

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
           AF         I  M  DG++ R L + D++++  ++SP G+ ++F
Sbjct: 120 AFLCNESGSSQIWEMNSDGTERRQLTQYDNDIEGFSFSPDGKKILF 165


>gi|301311124|ref|ZP_07217053.1| MdsD protein [Bacteroides sp. 20_3]
 gi|300831187|gb|EFK61828.1| MdsD protein [Bacteroides sp. 20_3]
          Length = 1076

 Score = 43.5 bits (101), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 23/181 (12%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y   ++   T ++TNT     +  +SPD   +V+ ++REG   +Y  +    + K+ +
Sbjct: 336 DVYVTSIEYETTRQITNTPQQERNIDFSPDGRSLVYSAEREGTWGIYESKLTRDEDKQFT 395

Query: 343 QDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
              E           + F P++SP G+ +AF +    +  + V+ +   Q R +++   L
Sbjct: 396 YAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLE---NRTTLRVINRKTKQVRTVLDGKYL 452

Query: 393 -------QAPTWSPSGRSLIFSRKKDG---DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                  Q   WSP  +  +      G   +T   L   D +G    L  +     D +W
Sbjct: 453 YSYSDGDQHFQWSPDSKWFLVDYISVGGWNNTDIALVKADGSGEVTNLTESGYSDGDAKW 512

Query: 443 V 443
           V
Sbjct: 513 V 513



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + SPD   I F    +    +Y + S+G   ++++    A    PVWSP G  IAF   
Sbjct: 29  CAISPDGQTIAFSYQGD----IYTVPSSGGKARQLTT-HPAHDTRPVWSPDGQRIAFASN 83

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               F + +M K+G + + L   S  + PT
Sbjct: 84  RSGNFDVFLMNKEGGEPKRLTTHSTNEYPT 113



 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V        +LT     +    +SPD  +I F S+R G   +++M   G + KR++
Sbjct: 45  DIYTVPSSGGKARQLTTHPAHDTRPVWSPDGQRIAFASNRSGNFDVFLMNKEGGEPKRLT 104

Query: 343 QDKEASY 349
                 Y
Sbjct: 105 THSTNEY 111


>gi|209965114|ref|YP_002298029.1| prolyl oligopeptidase family protein [Rhodospirillum centenum SW]
 gi|209958580|gb|ACI99216.1| prolyl oligopeptidase family protein [Rhodospirillum centenum SW]
          Length = 688

 Score = 43.5 bits (101), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 16/121 (13%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDL-----QSNATERLTNTLFIN 304
           KRIG        P  S +G+ A++ V   D A D   VDL           +LT+     
Sbjct: 35  KRIGT-------PALSPDGRSAVVPVTAYDTATDGRDVDLWLVPTAGGEARQLTSDPAAE 87

Query: 305 ISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               +SPD   I F + R+G +  QLYV+   G + +R+++        P W P    IA
Sbjct: 88  SEPQWSPDGRWIAFVARRDGDKAAQLYVLPVAGGEARRVTEVPTGVRL-PRWLPDSRRIA 146

Query: 363 F 363
           F
Sbjct: 147 F 147



 Score = 40.8 bits (94), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           T   G    + ++   G + R L  D   ++ P WSP GR + F  ++DGD  ++LY + 
Sbjct: 58  TATDGRDVDLWLVPTAGGEARQLTSDPAAESEPQWSPDGRWIAFVARRDGDKAAQLYVLP 117

Query: 423 L-NGRNETLINTPAYASDPQWV 443
           +  G    +   P     P+W+
Sbjct: 118 VAGGEARRVTEVPTGVRLPRWL 139



 Score = 40.0 bits (92), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 10/110 (9%)

Query: 306 SASYSPDSSQIV-----FESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           + + SPD    V     +++  +G++  L+++ + G + ++++ D  A   +P WSP G 
Sbjct: 39  TPALSPDGRSAVVPVTAYDTATDGRDVDLWLVPTAGGEARQLTSDPAAES-EPQWSPDGR 97

Query: 360 LIAF-TKFSGEKFA-IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
            IAF  +  G+K A + V+   G + R + E  + ++ P W P  R + F
Sbjct: 98  WIAFVARRDGDKAAQLYVLPVAGGEARRVTEVPTGVRLPRWLPDSRRIAF 147


>gi|150005859|ref|YP_001300603.1| prolyl oligopeptidase family protein [Bacteroides vulgatus ATCC
           8482]
 gi|294775569|ref|ZP_06741079.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           vulgatus PC510]
 gi|149934283|gb|ABR40981.1| prolyl oligopeptidase family protein [Bacteroides vulgatus ATCC
           8482]
 gi|294450619|gb|EFG19109.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           vulgatus PC510]
          Length = 706

 Score = 43.5 bits (101), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 10/146 (6%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S S SPD  QI +        + +    +YVM ++G +   ++Q    +  +P W   G 
Sbjct: 58  SLSISPDGKQIAYTVAYYSVPENKSHHVIYVMDADGKNNTLLTQ-TAWNESEPQWIKGGT 116

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF-SRKKDGDTGSK 417
            IAF         I  M  DG++ R++ +   N++  ++SP G+ ++F S+ K G     
Sbjct: 117 KIAFLCNESGGSQIWEMNPDGTERRIISDFKGNIEGFSFSPDGKKILFISQIKYGQRTVD 176

Query: 418 LYSIDLNGRNETLINTPAYASDPQWV 443
           LY  DL   +  ++N   Y    +WV
Sbjct: 177 LYP-DLPKASGIIVNDLMYKHWDEWV 201


>gi|329961886|ref|ZP_08299900.1| WD40-like protein [Bacteroides fluxus YIT 12057]
 gi|328531326|gb|EGF58170.1| WD40-like protein [Bacteroides fluxus YIT 12057]
          Length = 1085

 Score = 43.1 bits (100), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 5/101 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R S NG       + D    IY V        +LT       +  +SPD  QI F SDR 
Sbjct: 29  RISPNGTEIAFCYKGD----IYKVPATGGTAIQLTTQDSYECTPIWSPDGKQIAFASDRY 84

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           G   +++M S G + +R++    A+     ++P G  + F+
Sbjct: 85  GNFDIFMMPSGGGNAQRLTT-HSANELPSAFTPDGKQVLFS 124



 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 16/137 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SP+ ++I F      K  +Y + + G    +++  +++    P+WSP G  IAF      
Sbjct: 31  SPNGTEIAFCY----KGDIYKVPATGGTAIQLTT-QDSYECTPIWSPDGKQIAFASDRYG 85

Query: 370 KFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI------- 421
            F I +M   G   +RL    +N     ++P G+ ++FS        S L+         
Sbjct: 86  NFDIFMMPSGGGNAQRLTTHSANELPSAFTPDGKQVLFSASIQDPASSALFPTGAMTELY 145

Query: 422 ---DLNGRNETLINTPA 435
                 GR E ++ TPA
Sbjct: 146 KVPSTGGRTEQVLGTPA 162


>gi|218130952|ref|ZP_03459756.1| hypothetical protein BACEGG_02554 [Bacteroides eggerthii DSM 20697]
 gi|217986824|gb|EEC53156.1| hypothetical protein BACEGG_02554 [Bacteroides eggerthii DSM 20697]
          Length = 705

 Score = 43.1 bits (100), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 8/104 (7%)

Query: 310 SPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD  QI +        + +   +L+VM ++GS+ ++I+ D       P W   G  IAF
Sbjct: 60  SPDEKQIAYSVAYYSVPENKSNNELFVMNTDGSNNRQITCDNWQES-QPTWIKDGAKIAF 118

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
                    I  M  DG+  + L + D +++  ++SP G+ L+F
Sbjct: 119 LCNETGSSQIWEMNPDGTARKQLTQYDGDIEGFSFSPDGKKLLF 162


>gi|150009324|ref|YP_001304067.1| putative Tricorn-like protease [Parabacteroides distasonis ATCC
           8503]
 gi|149937748|gb|ABR44445.1| putative Tricorn-like protease [Parabacteroides distasonis ATCC
           8503]
          Length = 1076

 Score = 43.1 bits (100), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 44/198 (22%), Positives = 80/198 (40%), Gaps = 27/198 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NGK      + D    +Y   ++   T ++TNT     +  +SPD   +V+ ++REG 
Sbjct: 323 SPNGKEVAFITRGD----VYVTSIEYETTRQITNTPQQERNIDFSPDGRSLVYSAEREGT 378

Query: 326 EQLYVMQSNGSDQKRISQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             +Y  +    + K+ +   E           + F P++SP G+ +AF +    +  + V
Sbjct: 379 WGIYESKLTRDEDKQFTYAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLE---NRTTLRV 435

Query: 376 MKKDGSQERLLVEDSNL-------QAPTWSPSGRSLIFSRKKDG---DTGSKLYSIDLNG 425
           + +   Q R +++   L       Q   WSP  +  +      G   +T   L   D +G
Sbjct: 436 INRKTKQVRTVLDGKYLYSYSDGDQHFQWSPDSKWFLVDYISVGGWNNTDIALVKADGSG 495

Query: 426 RNETLINTPAYASDPQWV 443
               L  +     D +WV
Sbjct: 496 EVTNLTESGYSDGDAKWV 513



 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + SPD   I F    +    +Y + S+G   ++++    A    PVWSP G  IAF   
Sbjct: 29  CAISPDGQTIAFSYQGD----IYTVPSSGGKARQLTT-HPAHDTRPVWSPDGQKIAFASN 83

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               F + +M K+G + + L   S  + PT
Sbjct: 84  RSGNFDVFLMNKEGGEPKRLTTHSTNEYPT 113



 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V        +LT     +    +SPD  +I F S+R G   +++M   G + KR++
Sbjct: 45  DIYTVPSSGGKARQLTTHPAHDTRPVWSPDGQKIAFASNRSGNFDVFLMNKEGGEPKRLT 104

Query: 343 QDKEASY 349
                 Y
Sbjct: 105 THSTNEY 111


>gi|157963221|ref|YP_001503255.1| peptidase S9 prolyl oligopeptidase [Shewanella pealeana ATCC
           700345]
 gi|157848221|gb|ABV88720.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella pealeana ATCC 700345]
          Length = 680

 Score = 43.1 bits (100), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 9/102 (8%)

Query: 352 PVWSPQGDLI--AFTKFSGEK----FAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSL 404
           P+ SPQGD I    T++   +      + +  KDG SQ+ L  +       T+SP G++L
Sbjct: 40  PIISPQGDKIIAPVTQYDVPEDKGSTQLWLFDKDGDSQQALTAKGMRASEATFSPDGKTL 99

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNET--LINTPAYASDPQWVG 444
            F  K+D D   ++Y + +NG  E   L + P      +WVG
Sbjct: 100 AFISKRDEDEAGQVYLLPMNGPGEAQKLTDVPGGVYGMKWVG 141


>gi|116624690|ref|YP_826846.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227852|gb|ABJ86561.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 595

 Score = 43.1 bits (100), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 110/257 (42%), Gaps = 38/257 (14%)

Query: 217 PRFSPNQQKVAYA-TYDDEDILRVY--LMDTRIDRA-PKRI--GNFRSMILAPRFSSNGK 270
           PR +P+     Y  T++D    RV   L    I++  P+RI  G +R    +PR+S + +
Sbjct: 36  PRINPDGTDAVYVETWNDRATDRVCANLWQVAIEKGTPQRITEGPWRDS--SPRWSPDSR 93

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            A IS  +  +  I+   +     E+LT+      S ++SPD   + F      +++L+V
Sbjct: 94  LAWIS-DRTGSPQIWVRRM--GGAEKLTDLTAPPQSLAWSPDGKSLAFTM----RDRLFV 146

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----------SGEKFAIGVMKKDG 380
           + + G   +     +   + +P W P G  I  +             GE +AI +   DG
Sbjct: 147 VPAAGGKPREFPLGELEIHGEPAWMPDGQSILVSAAPPPNAANVLQGGEIYAIRL--ADG 204

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIF---SRKKDGDTGSKLYSIDLNG-RNETL------ 430
           ++ +L       + P  SP G  + +     K      SKLY  + +G R + L      
Sbjct: 205 TRRQLTQHPGPDEDPVPSPDGSRIAWIAREPKPQSYVVSKLYVANPDGSRAKVLAGSLDR 264

Query: 431 -INTPAYASDPQWVGFM 446
            +  P ++SD + + F+
Sbjct: 265 DVRHPQWSSDSRTIYFL 281


>gi|326424405|ref|NP_763403.2| protease-like protein [Vibrio vulnificus CMCP6]
 gi|319999795|gb|AAO08393.2| Protease-related protein [Vibrio vulnificus CMCP6]
          Length = 1088

 Score = 43.1 bits (100), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 24/138 (17%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ S G +   ++     S  +P+WSP G+ IAFT    +
Sbjct: 47  SPDGQRIAFTY----AGQIWLIASKGGEAIPLTSADSYSE-NPIWSPDGESIAFTT---D 98

Query: 370 KFAIG----VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD------------ 413
           +F  G    V    G  +RL    S      +SP G+ + F   + GD            
Sbjct: 99  RFGPGDVFLVSANGGDAKRLTYHFSKDVPYAFSPDGQEVYFRSSRIGDIESSVNNGFAGS 158

Query: 414 TGSKLYSIDLNGRNETLI 431
             +++YS+D++G  E L+
Sbjct: 159 ASAQIYSVDVSGGREKLL 176



 Score = 37.0 bits (84), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 23/115 (20%)

Query: 256 FRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            R + L+P      F+  G+  LI+ +  EA+ + S D  S              +  +S
Sbjct: 41  LRDIALSPDGQRIAFTYAGQIWLIASKGGEAIPLTSADSYSE-------------NPIWS 87

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLIAF 363
           PD   I F +DR G   ++++ +NG D KR++    K+  Y    +SP G  + F
Sbjct: 88  PDGESIAFTTDRFGPGDVFLVSANGGDAKRLTYHFSKDVPY---AFSPDGQEVYF 139


>gi|34540516|ref|NP_904995.1| prolyl oligopeptidase family protein [Porphyromonas gingivalis W83]
 gi|34396829|gb|AAQ65894.1| prolyl oligopeptidase family protein [Porphyromonas gingivalis W83]
          Length = 648

 Score = 43.1 bits (100), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 10/142 (7%)

Query: 310 SPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD    V+          +   +L+ +  +GS +K+I+ D E++ + P W   G  IAF
Sbjct: 12  SPDGKTAVYAVSFPDVKTNKATRELFTVNLDGSGRKQIT-DTESNEYAPAWMADGKRIAF 70

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSI 421
               G    + VM  DG++ R L   +  +    +SP  + ++F++  K G     +Y  
Sbjct: 71  MSNEGGSMQLWVMNADGTERRQLSNIEGGITGFLFSPDEKQVLFTKDIKFGKRTKDIYP- 129

Query: 422 DLNGRNETLINTPAYASDPQWV 443
           DL+     +I    Y    +WV
Sbjct: 130 DLDKATGRIITDLMYKHWDEWV 151



 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 57/107 (53%), Gaps = 7/107 (6%)

Query: 265 FSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            S +GK A+ +V            ++++V+L  +  +++T+T     + ++  D  +I F
Sbjct: 11  LSPDGKTAVYAVSFPDVKTNKATRELFTVNLDGSGRKQITDTESNEYAPAWMADGKRIAF 70

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S+  G  QL+VM ++G++++++S + E      ++SP    + FTK
Sbjct: 71  MSNEGGSMQLWVMNADGTERRQLS-NIEGGITGFLFSPDEKQVLFTK 116


>gi|294508436|ref|YP_003572494.1| acylaminoacyl-peptidase [Salinibacter ruber M8]
 gi|294344764|emb|CBH25542.1| acylaminoacyl-peptidase [Salinibacter ruber M8]
          Length = 703

 Score = 43.1 bits (100), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 45/210 (21%), Positives = 90/210 (42%), Gaps = 40/210 (19%)

Query: 262 APRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +PR+S +G + A  S  ++   +IY   ++ N T R+T         S+SPD + + F  
Sbjct: 115 SPRWSPDGSKIAFTSSDEEHGTEIYVHWVEQNKTARITQLENAPSGLSWSPDGAHLAF-- 172

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---- 376
                  ++V     +   R    + A + +P   P+ +    T+ + E    GV+    
Sbjct: 173 ------SMHVSAPEPTLASRPEPPEGADWAEP---PRVE----TRLNHESDGTGVLDYGH 219

Query: 377 ------KKDGSQER-LLVEDSNLQA-PTWSPSGRSLIFSRKKDGD-----TGSKLYSIDL 423
                 + DG + R +   D N  + P W+P G +L++S  +  +       S+LY + +
Sbjct: 220 DHLFVVRADGGRARQVTAGDYNHSSRPVWTPDGEALLYSASRHDNWERERRNSELYRVPV 279

Query: 424 NGRNETLI-------NTPAYASDPQWVGFM 446
           +G   T +       +TP  + D + + ++
Sbjct: 280 DGGESTPLTDRFGPDHTPRVSPDGETIAYL 309


>gi|83815698|ref|YP_446500.1| acylaminoacyl-peptidase [Salinibacter ruber DSM 13855]
 gi|83757092|gb|ABC45205.1| acylaminoacyl-peptidase [Salinibacter ruber DSM 13855]
          Length = 703

 Score = 43.1 bits (100), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 45/210 (21%), Positives = 90/210 (42%), Gaps = 40/210 (19%)

Query: 262 APRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +PR+S +G + A  S  ++   +IY   ++ N T R+T         S+SPD + + F  
Sbjct: 115 SPRWSPDGSKIAFTSSDEEHGTEIYVHWVEQNKTARITQLENAPSGLSWSPDGTHLAF-- 172

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---- 376
                  ++V     +   R    + A + +P   P+ +    T+ + E    GV+    
Sbjct: 173 ------SMHVSAPEPTLASRPEPPEGADWAEP---PRVE----TRLNHESDGTGVLDYGH 219

Query: 377 ------KKDGSQER-LLVEDSNLQA-PTWSPSGRSLIFSRKKDGD-----TGSKLYSIDL 423
                 + DG + R +   D N  + P W+P G +L++S  +  +       S+LY + +
Sbjct: 220 DHLFVVRADGGRARQVTAGDYNHSSRPVWTPDGEALLYSANRHDNWERERRNSELYRVPV 279

Query: 424 NGRNETLI-------NTPAYASDPQWVGFM 446
           +G   T +       +TP  + D + + ++
Sbjct: 280 DGGESTPLTDRFGPDHTPRVSPDGETIAYL 309



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 13/108 (12%)

Query: 310 SPDSSQIVFE-------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           SPD SQIV++        DR     L+ + ++G+D  +++  + A    P WSP G  IA
Sbjct: 69  SPDGSQIVYQRRGMDVMEDRR-TSALWRLDADGTDHTKLTS-RTADESSPRWSPDGSKIA 126

Query: 363 FT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           FT   +  G +  +  ++++ +     +E++     +WSP G  L FS
Sbjct: 127 FTSSDEEHGTEIYVHWVEQNKTARITQLENAP-SGLSWSPDGTHLAFS 173


>gi|103487490|ref|YP_617051.1| peptidase S9, prolyl oligopeptidase active site region
           [Sphingopyxis alaskensis RB2256]
 gi|98977567|gb|ABF53718.1| peptidase S9, prolyl oligopeptidase active site region
           [Sphingopyxis alaskensis RB2256]
          Length = 720

 Score = 43.1 bits (100), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 11/132 (8%)

Query: 301 LFINISASYSPDSSQIVF-------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           L I      SPD   I +        +DR       +  + G +     QD  A  F P 
Sbjct: 68  LAIAADPQISPDGRHIAYVRRANDIMTDRAVSSIWLIDTATGRETPLAGQDGPA--FSPR 125

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           WSP G  +A+   +G    + V   DG +  RL    ++  + TW+P GRS+ ++     
Sbjct: 126 WSPDGSRLAYVSAAGGSAQLWVRWMDGGEAVRLTGLPTSPSSLTWAPDGRSIAYTMLVK- 184

Query: 413 DTGSKLYSIDLN 424
           D G++L S   N
Sbjct: 185 DEGARLGSAPAN 196


>gi|88703636|ref|ZP_01101352.1| peptidase S9B family protein [Congregibacter litoralis KT71]
 gi|88702350|gb|EAQ99453.1| peptidase S9B family protein [Congregibacter litoralis KT71]
          Length = 689

 Score = 43.1 bits (100), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 37/168 (22%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +  F +++ +P  S+   + L   Q   A+DI+ ++   N                 SPD
Sbjct: 18  VAAFGALLFSPSLSAQESQTLPPFQ---ALDIFEIEWALNP--------------QISPD 60

Query: 313 SSQIVF--------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S Q+V+        E  R G   L+++      Q ++S   E +    VWSP+GD IA+ 
Sbjct: 61  SQQVVYRRMGFDIMEDRRRGN--LWLVDIASQRQHKLSS-FEGNESSAVWSPRGDRIAYV 117

Query: 365 KFSG--EKFAIGVMKKDGSQE----RLLVEDSNLQAPTWSPSGRSLIF 406
           + +G  E   I +   +G Q     RL     +++   WSP GR L F
Sbjct: 118 RSAGDDEGAEIYMHWLEGGQSARVTRLPATPKDIR---WSPDGRHLAF 162


>gi|297183395|gb|ADI19529.1| dipeptidyl aminopeptidases/acylaminoacyl-peptidases [uncultured
           Chloroflexi bacterium HF0770_09E03]
          Length = 462

 Score = 43.1 bits (100), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 23/176 (13%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKE 326
           N +R  +         I+ +        RLT+  + + S  + PD   I+FES R E  E
Sbjct: 184 NYRRDRVGYHPKGYRHIFIIPADGGTPHRLTHGDWHHDSYEWMPDGKAIIFESLRVEDAE 243

Query: 327 ------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF---AIGV 375
                 ++Y +  N  + +++S+ K      PV SP G  IA+T   +S + +    +  
Sbjct: 244 YQWRESEIYSVDVNSGEIRQLSKRKGPDR-GPVPSPDGRYIAYTGHDWSDDTYIEEGLYF 302

Query: 376 MKKDGSQ-ERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           MK DGS+ ER+  E      NL   TWS  G  + ++   +G   S LY   L+G+
Sbjct: 303 MKADGSKPERIAGEMGRRPGNL---TWSEDGSGVYYNAAMEGT--SNLYFAPLSGK 353


>gi|319899993|ref|YP_004159721.1| peptidase S41 [Bacteroides helcogenes P 36-108]
 gi|319415024|gb|ADV42135.1| peptidase S41 [Bacteroides helcogenes P 36-108]
          Length = 1083

 Score = 43.1 bits (100), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 12/92 (13%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--- 339
           D+Y   ++   T+++TNT F      ++PD   +V+ S+R G  QLY       D+K   
Sbjct: 336 DVYVTSVEYKTTKQVTNTPFQERDIDFAPDGRSLVYASERGGLWQLYTSSIVRKDEKLFT 395

Query: 340 --------RISQDKEASYFDPVWSPQGDLIAF 363
                   R++    AS F P +SP G  +AF
Sbjct: 396 YATELKEERLTNSDVAS-FRPRYSPDGKEVAF 426



 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 32/60 (53%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V +      ++T     + +  +SPDS  I F SDR G   +Y++   G + +R++
Sbjct: 45  DIYTVSVTGGRATQITTNAAYDTTPVWSPDSKWIAFASDRLGSMDVYLVSKEGGEPRRLT 104


>gi|167625402|ref|YP_001675696.1| peptidase S9 prolyl oligopeptidase [Shewanella halifaxensis
           HAW-EB4]
 gi|167355424|gb|ABZ78037.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella halifaxensis HAW-EB4]
          Length = 680

 Score = 43.1 bits (100), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 9/102 (8%)

Query: 352 PVWSPQGDLI--AFTKFSGEK----FAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSL 404
           P+ SP GD I    T++   +      + +  K+GS +R L      +  PT+SP G +L
Sbjct: 40  PIISPSGDRIIAPVTQYDVPEDKGSTQLWLFDKEGSTQRALTAKGLRVSEPTFSPDGNTL 99

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNET--LINTPAYASDPQWVG 444
            F  K+D D   ++Y + +NG  E   L + P      +WVG
Sbjct: 100 AFISKRDEDEAGQVYLLPMNGPGEAQKLTDVPGGVYGMKWVG 141


>gi|159896747|ref|YP_001542994.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Herpetosiphon aurantiacus ATCC 23779]
 gi|159889786|gb|ABX02866.1| Periplasmic component of the Tol biopolymer transport system-like
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 331

 Score = 43.1 bits (100), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 54/132 (40%), Gaps = 19/132 (14%)

Query: 308 SYSPDSSQIVFESDREG----------KEQLYVMQSNGSDQKRISQD-KEASYFDPVWSP 356
           ++SPD + I +                +  LY+M S+G +++ I  + +  S     WSP
Sbjct: 198 AWSPDGTTIAYAGSPHAADSMATLGGVRSTLYLMDSDGGNRREIGTNIRNVSGLQ--WSP 255

Query: 357 QGDLIA----FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            G  +     F  F  + + +   K +  Q  L     N Q P WSP G+ +    +K  
Sbjct: 256 DGQWLVVLGYFDGFDNQVWLVNPTKAEWHQ--LTTTVGNYQWPAWSPDGKQIAVIWRKPA 313

Query: 413 DTGSKLYSIDLN 424
           D G   Y + L+
Sbjct: 314 DLGPSDYVMTLD 325


>gi|157273491|gb|ABV27390.1| prolyl oligopeptidase family protein [Candidatus
           Chloracidobacterium thermophilum]
          Length = 691

 Score = 43.1 bits (100), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 26/170 (15%)

Query: 262 APRFSSNGKRALIS-----------VQKDEAM----DIYSVDLQSNATERLTNTLFINIS 306
           AP FS +G+   +S             +DEA+    DI+ V L     +R++ +   +  
Sbjct: 226 APPFSLSGRDYDVSPDGKELAFARNTDRDEAISTNNDIFIVPLGGGEPKRISTSPGSDTH 285

Query: 307 ASYSPDSSQI--------VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             YSPD   I        +FESD   K+Q+ + +      +R+S   + S+ +  WSP  
Sbjct: 286 PRYSPDGKYIAWLSQERAMFESD---KKQVILYERATGKLRRLSDKVDISFDELAWSPDS 342

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             +  T     +  +  +   G+  R+LVE       + +P G++L F++
Sbjct: 343 QTLFLTGDHRGQVPVFTLTLAGNDVRMLVEQGQNGNLSVAPDGKTLYFTQ 392



 Score = 40.4 bits (93), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 8/108 (7%)

Query: 306 SASYSPDSSQIVFESDREGKE------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           + + SPD   + +      K       +L+VM + G    ++     ++  DP WSP   
Sbjct: 50  AVAVSPDGKYLAYTQGVPDKAANRIQYELWVMPTGGGPAHQLVSGPYSAT-DPCWSPDSQ 108

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
            IAF      K  I  + ++G + R + +  +N+    W+  GR LIF
Sbjct: 109 TIAFVSNRDGKAQIWTVHRNGGEPRKVTDFFTNVSGILWTADGRHLIF 156


>gi|68349585|gb|AAY96688.1| protein kinase/protein beta WD-40 repeat [uncultured bacterium
           BAC10-4]
          Length = 903

 Score = 43.1 bits (100), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 14/188 (7%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINIS-ASYSPD 312
           +F SM   P +  +G+  + S +     +++S  +  +A  +RL  T    I    +SPD
Sbjct: 663 DFPSM---PIWRPDGREIVFSRRTAVEAELWSQPVDGHAQPQRLWKTPASYIGPGGFSPD 719

Query: 313 SSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
              ++  +      EG  +L  + ++ +  +R      A+ + P  SP G  +A+T    
Sbjct: 720 GRTLILMATDLRTAEGHLRLLDLTAHNAPVERPWFPTPATEWTPNLSPDGRWLAYTSMES 779

Query: 369 EKFAIGVMK--KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +  + V +    G++ ++ V       P WSP GR L F  +    T +K+ ++D+   
Sbjct: 780 GRSEVYVRRFPDGGAKSKVSVAGGGF--PQWSPDGRELFFPAQPTTAT-TKMMAVDVRTT 836

Query: 427 NETLINTP 434
              ++ TP
Sbjct: 837 PSLVLGTP 844


>gi|220931667|ref|YP_002508575.1| WD40 domain protein beta Propeller [Halothermothrix orenii H 168]
 gi|219992977|gb|ACL69580.1| WD40 domain protein beta Propeller [Halothermothrix orenii H 168]
          Length = 918

 Score = 43.1 bits (100), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 44/89 (49%), Gaps = 4/89 (4%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F S+ ++P    +G +A++SV  +   D+Y    +    + L +   I +   +SPD  
Sbjct: 444 SFSSLDISP----DGNKAVLSVMYNSKKDLYLYSFEDKVLKPLIDDNHIEVFPVWSPDGK 499

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            +VF SDR G+  LY +     +  RI+ 
Sbjct: 500 YVVFSSDRNGRFNLYALDMVTKNLYRITN 528



 Score = 40.0 bits (92), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 14/109 (12%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGV 375
           FE  R+  E    +++ G  +  I++  E  YF  +P  SP G  +A+  +  +  AI +
Sbjct: 277 FEQKRKAIELNERIETEG--RTEITRLTEHGYFTLNPSVSPDGKKVAYYHYYNKFSAIRI 334

Query: 376 MKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + +DG   +L+      D N+   TWSP G+ L+++++   D   K+Y+
Sbjct: 335 LTEDGRDYQLVPAISSSDGNI---TWSPDGKKLVYAKQ---DVYKKVYN 377



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 23/223 (10%)

Query: 217 PRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P  SP+ +KVAY  Y ++   +R+   D R  +    I +    I    +S +GK+ L+ 
Sbjct: 311 PSVSPDGKKVAYYHYYNKFSAIRILTEDGRDYQLVPAISSSDGNI---TWSPDGKK-LVY 366

Query: 276 VQKD------EAMDIYSVDLQSNATERLTNTLFINISASYSP---DSSQIVFESDREGKE 326
            ++D         D+Y  D  ++   RLT         +Y+P   D++ I++ +  +G  
Sbjct: 367 AKQDVYKKVYNYYDLYMYDFTTDREIRLTRG-----ERAYAPVFKDNNTIIYLTQDKGIT 421

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            +  +         I +   +  F  +  SP G+    +     K  + +   +    + 
Sbjct: 422 SIKKIDLKTRQTSTILKGNSSFSFSSLDISPDGNKAVLSVMYNSKKDLYLYSFEDKVLKP 481

Query: 386 LVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           L++D++++  P WSP G+ ++FS  ++G     LY++D+  +N
Sbjct: 482 LIDDNHIEVFPVWSPDGKYVVFSSDRNGRF--NLYALDMVTKN 522


>gi|167622976|ref|YP_001673270.1| winged helix family two component response transcriptional
           regulator [Shewanella halifaxensis HAW-EB4]
 gi|167352998|gb|ABZ75611.1| putative two component transcriptional regulator, winged helix
           family [Shewanella halifaxensis HAW-EB4]
          Length = 716

 Score = 43.1 bits (100), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 98/238 (41%), Gaps = 17/238 (7%)

Query: 202 NIRYLTPSRDQILFE------PRFSPNQQKVAYATYDDEDILRVYLMDTR-IDRAPKRIG 254
           +IRY+  ++  +  E      P  SP+ + + Y +        +YL D +     PKR+ 
Sbjct: 170 SIRYVPTTKQNLTTEAGSELYPAVSPDGRWLVYGSRGSNKYASLYLKDLQNPAETPKRLT 229

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNATERLTNTLFINISASYSPD 312
           + ++  L   +S +G       +       Y   ++L SN   +L      + +   +PD
Sbjct: 230 STKTAELRAVWSPDGSALYYGSEHRSEDKCYLTKLNLDSNEALKLGECYTYSSAIDIAPD 289

Query: 313 SSQIVFESD-REG-KEQLYVMQSN--GSDQKRISQDKEASYFDP--VWSPQGDLIAFTKF 366
           +S++V+  D  EG    LY +     G   KR+S  +  SY D    +SP G  +A  + 
Sbjct: 290 ASRLVYIWDGAEGFGSGLYELSLTIEGEKPKRLSCTENCSYRDRDIAFSPNGSWLAVARR 349

Query: 367 SGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            G       ++   +QE  RL     +++  +W      LIFS +  G     +  ID
Sbjct: 350 FGNISEDIFIRHTETQEEQRLTFGLEDIRGLSWHQDSERLIFSTENSGVRNGYIVGID 407


>gi|237751978|ref|ZP_04582458.1| translocation protein TolB [Helicobacter winghamensis ATCC BAA-430]
 gi|229376545|gb|EEO26636.1| translocation protein TolB [Helicobacter winghamensis ATCC BAA-430]
          Length = 418

 Score = 43.1 bits (100), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 44/217 (20%), Positives = 97/217 (44%), Gaps = 7/217 (3%)

Query: 128 FRLWDVKDRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             L+DV      + K++ +    ++  +AH ++ DI   I     D+  R++ ++     
Sbjct: 104 LHLYDVNSGLVALSKEYKNMQQETYPFLAHKMAIDINAYIKAPSVDWMERMVILAYYTKP 163

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    S  +M       +    S    +F    +  Q    Y  Y D+  L  + + T  
Sbjct: 164 G---ESDIIMSDYTLTYKKKVISGGLNIFPKWANAAQNAFYYTKYLDKPTLFKFDLGTGQ 220

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +   K++ +   M++A   S++  + L+++  +E  DI+  D+ + A +RLT    I++S
Sbjct: 221 N---KKMFDSSGMLVASDVSNDENKILVTMAPNEQPDIFMYDITNGALKRLTKYSGIDVS 277

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            ++  +  +++F SDR G   ++ + ++G     + Q
Sbjct: 278 GNFIDNEERVMFISDRLGYPNVFAIPASGEVSGNVEQ 314


>gi|317033773|ref|XP_001395414.2| hypothetical protein ANI_1_1672104 [Aspergillus niger CBS 513.88]
          Length = 688

 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 13/143 (9%)

Query: 280 EAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIV------FESDREGKEQLYVM 331
           +A+D Y +   SN+TE   L          S++PD +++V      F S      ++Y  
Sbjct: 443 DALDSYDIYNISNSTEVEWLEEGNSGAFQPSWNPDGTELVSGFGAWFVSRTTNTAKIYHA 502

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMKKDGSQERLLVE 388
            +NG+    ++   + S F P WSP G  I + K+S        + ++     +   L  
Sbjct: 503 FANGTWHTNLTDGSDNSGF-PSWSPDGSAIVYRKWSLATEAPLGLHILNFTTGKTHQLT- 560

Query: 389 DSNLQAPTWSPSGRSLIFSRKKD 411
           D     P WSP G  ++F+R  +
Sbjct: 561 DGWDNTPGWSPDGERIVFTRNNN 583



 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 43/253 (16%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFSPNQQ 224
           I G+KG     I +++    SG     L + + DG N   L  ++     + P +S + +
Sbjct: 62  IEGKKG-----IFYMNRIGPSG---GQLWISNSDGTNATQLLGNQSNAFDYHPTWSSDGE 113

Query: 225 KVAYATY----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR-ALISVQKD 279
            + + +        D+ RV +  + ++            +L+P    NGK  A +S Q +
Sbjct: 114 WIVFTSERRGPGQSDLYRVRVDGSGLETLAATDSVEDIGVLSP----NGKTLAYVSTQGN 169

Query: 280 EAMDIYSVDLQSNATERLTNTL---------FINISASYSPDSSQIVFESDRE------- 323
              +I+  DL S   + LT+T            +   S+SPD   IVF SDR        
Sbjct: 170 YTTNIWVKDLASGQAQNLTDTASNRADNTWPTGHFRPSWSPDGEWIVFSSDRNTDWTGHS 229

Query: 324 ---GKEQ-----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              G E      +Y ++ +GSD + + + +  S   P +SP G  I +   + E    G 
Sbjct: 230 DGTGWEHTQTLGVYAVRPDGSDFRTVIRQEGYSLGTPQFSPDGKRIIYNNMTTED-TYGC 288

Query: 376 MKKDGSQERLLVE 388
                 QE +  +
Sbjct: 289 HGVSAQQEAVTAQ 301



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 17/138 (12%)

Query: 291 SNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEA 347
           +NAT+ L N +   +   ++S D   IVF S+R G  Q  LY ++ +GS  + ++     
Sbjct: 89  TNATQLLGNQSNAFDYHPTWSSDGEWIVFTSERRGPGQSDLYRVRVDGSGLETLAATDSV 148

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQA----------P 395
                V SP G  +A+    G  +   +  KD    Q + L + ++ +A          P
Sbjct: 149 EDIG-VLSPNGKTLAYVSTQG-NYTTNIWVKDLASGQAQNLTDTASNRADNTWPTGHFRP 206

Query: 396 TWSPSGRSLIFSRKKDGD 413
           +WSP G  ++FS  ++ D
Sbjct: 207 SWSPDGEWIVFSSDRNTD 224


>gi|298242217|ref|ZP_06966024.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297555271|gb|EFH89135.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 702

 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 13/112 (11%)

Query: 265 FSSNGKRALISVQ-KDEAM-----DIYSVDLQS-----NATERLTNTLFINISASYSPDS 313
            S +G+  + S+  KD+A      DIY + L       N   RLT     N    +SPDS
Sbjct: 27  LSPDGRSVVFSLALKDKASNEVLSDIYLLRLDEHGQALNEPVRLTRGGKQNNFPVWSPDS 86

Query: 314 SQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +++F S+REG K QL++++  G + ++++        +  WSP G  IA T
Sbjct: 87  QRLLFTSNREGDKAQLWLLEMGGGEARKLTNFARG-INEVAWSPDGKWIALT 137


>gi|242041123|ref|XP_002467956.1| hypothetical protein SORBIDRAFT_01g037140 [Sorghum bicolor]
 gi|241921810|gb|EER94954.1| hypothetical protein SORBIDRAFT_01g037140 [Sorghum bicolor]
          Length = 724

 Score = 42.7 bits (99), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 100/228 (43%), Gaps = 46/228 (20%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-- 274
           P FS +  K+A+    D +   V+L D+   R         S I +P +  N K+ ++  
Sbjct: 391 PTFSKDGSKLAFV---DNEFKAVWLADSHGLRVVFETDGPDS-IFSPVW--NQKKDILYV 444

Query: 275 ----SVQKDEAMDIYSV-DLQSNA-----TERLTNTLFINISASYSPDSSQIVFESDREG 324
               S + +E ++IY++ D+   A     T +LT   F N     +PD ++ VF S R+G
Sbjct: 445 CMGPSFKANETLEIYAIPDVSRGARARRHTRQLTKGKFNNAFPFTNPDGTKFVFRSTRDG 504

Query: 325 KEQ----LYVMQSNGSDQ---KRISQDKEASYFDPV--WSPQGDLIAFTK---------- 365
            ++    LY+M+     +    ++++  E S+ D    WSP G+L+ F            
Sbjct: 505 GDKNYKNLYIMEDAEFGEVGGGKVTRLTEGSWIDTHCQWSPDGNLVVFASNRDKPADAPE 564

Query: 366 ----FSGEKFAIGVMK-KDGSQERLLVEDSNLQA----PTWSPSGRSL 404
                    FA+ +M   D S  R++    +L      P +SP GRS+
Sbjct: 565 RDHGLDPGYFAVYLMNVSDRSVVRVIRSGYDLSGHVNHPVFSPDGRSI 612


>gi|114048456|ref|YP_739006.1| transcriptional regulator domain-containing protein [Shewanella sp.
           MR-7]
 gi|113889898|gb|ABI43949.1| transcriptional regulator domain protein [Shewanella sp. MR-7]
          Length = 716

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 89/183 (48%), Gaps = 10/183 (5%)

Query: 265 FSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G+   I+ +  + + DI+  DL S + +RLT+ L      S++PD+  +VF ++  
Sbjct: 337 FSPDGRWLAIARRFSNISEDIFIRDLASASEKRLTHGLEDIRGLSWTPDAQSLVFATEDS 396

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---KFSGEKFAIGVMKKDG 380
           G    +++    +  +  S D E   +    S +G+L+      +F    F++G     G
Sbjct: 397 GSRNGFIIDIETTHIR--SLDVEGMSYPSSVSEEGELVYHQYRRQFQMAYFSLG-ESVPG 453

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASD 439
           S   LL    + + P +SP  + ++F   + G   +++++ D+NG+  E   +  +  + 
Sbjct: 454 SLFPLLYSSISHRNPDYSPEAKRIVFVSSETG--YNEIWTSDINGKKLEQHTHLKSRVAY 511

Query: 440 PQW 442
           P+W
Sbjct: 512 PRW 514


>gi|265767748|ref|ZP_06095280.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263252420|gb|EEZ23948.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 1095

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y   ++   T+++TNT        ++PD   +V+ S+R G  QLY       D+K+ +
Sbjct: 336 DVYVTSVEYKTTKQVTNTPCQERGIDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKQFT 395

Query: 343 QDKEA----------SYFDPVWSPQGDLIAF 363
              E           + F+P +SP G  IAF
Sbjct: 396 YATELKEERLTNSDIASFNPKYSPDGKEIAF 426



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 34/60 (56%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI++V +      ++T     + +  +SPDS QI F SDR G   ++++  +G + +R++
Sbjct: 45  DIFTVPVSGGKATQITTNPAFDTTPIWSPDSKQIAFASDRMGSMDVFIVSKDGGEPRRLT 104


>gi|134080129|emb|CAK46110.1| unnamed protein product [Aspergillus niger]
          Length = 719

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 13/143 (9%)

Query: 280 EAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIV------FESDREGKEQLYVM 331
           +A+D Y +   SN+TE   L          S++PD +++V      F S      ++Y  
Sbjct: 468 DALDSYDIYNISNSTEVEWLEEGNSGAFQPSWNPDGTELVSGFGAWFVSRTTNTAKIYHA 527

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMKKDGSQERLLVE 388
            +NG+    ++   + S F P WSP G  I + K+S        + ++     +   L +
Sbjct: 528 FANGTWHTNLTDGSDNSGF-PSWSPDGSAIVYRKWSLATEAPLGLHILNFTTGKTHQLTD 586

Query: 389 DSNLQAPTWSPSGRSLIFSRKKD 411
             +   P WSP G  ++F+R  +
Sbjct: 587 GWD-NTPGWSPDGERIVFTRNNN 608



 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 61/149 (40%), Gaps = 26/149 (17%)

Query: 265 FSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTL---------FINISASYSPDSS 314
            S NGK  A +S Q +   +I+  DL S   + LT+T            +   S+SPD  
Sbjct: 179 LSPNGKTLAYVSTQGNYTTNIWVKDLASGQAQNLTDTASNRADNTWPTGHFRPSWSPDGE 238

Query: 315 QIVFESDRE----------GKEQ-----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            IVF SDR           G E      +Y ++ +GSD + + + +  S   P +SP G 
Sbjct: 239 WIVFSSDRNTDWTGHSDGTGWEHTQTLGVYAVRPDGSDFRTVIRQEGYSLGTPQFSPDGK 298

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            I +   + E    G       QE +  +
Sbjct: 299 RIIYNNMTTED-TYGCHGVSAQQEAVTAQ 326



 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 17/138 (12%)

Query: 291 SNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEA 347
           +NAT+ L N +   +   ++S D   IVF S+R G  Q  LY ++ +GS  + ++     
Sbjct: 114 TNATQLLGNQSNAFDYHPTWSSDGEWIVFTSERRGPGQSDLYRVRVDGSGLETLAATDSV 173

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQA----------P 395
                V SP G  +A+    G  +   +  KD    Q + L + ++ +A          P
Sbjct: 174 EDIG-VLSPNGKTLAYVSTQG-NYTTNIWVKDLASGQAQNLTDTASNRADNTWPTGHFRP 231

Query: 396 TWSPSGRSLIFSRKKDGD 413
           +WSP G  ++FS  ++ D
Sbjct: 232 SWSPDGEWIVFSSDRNTD 249


>gi|108757114|ref|YP_634720.1| S9C family peptidase [Myxococcus xanthus DK 1622]
 gi|108460994|gb|ABF86179.1| peptidase, S9C (acylaminoacyl-peptidase) subfamily [Myxococcus
           xanthus DK 1622]
          Length = 730

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 17/149 (11%)

Query: 308 SYSPDSSQIVFESDREGKEQ-------LYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGD 359
           +++PD+  IVF +   G+ +       L+V   +G  + R +++   A+   PV+SP G 
Sbjct: 278 TFTPDNKSIVFAARDVGRSEAWSTDLDLFVAPIDGKAKPRKLTEKNRATDTSPVFSPDGK 337

Query: 360 LIAF-----TKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDG 412
            +A+       F  +++ + +    G QER+L +  D ++ +  WS  G++L  S    G
Sbjct: 338 TLAYLAMSRPGFEADRYRVILRTWPGGQERVLTQDWDRSVGSLAWSADGKTLFASAGHVG 397

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                ++++D+     T +     A  PQ
Sbjct: 398 Q--QPIFALDVATGKPTQLTKDGAADAPQ 424


>gi|255930285|ref|XP_002556702.1| Pc06g00930 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581315|emb|CAP79086.1| Pc06g00930 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 673

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 33/201 (16%)

Query: 265 FSSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           FS +G+    + ++  D   DIY V    +  E L  T  +      SP+  QI + S  
Sbjct: 89  FSPDGEWITFTGERNGDGNSDIYRVRTDGSDLEELVATSSLEDGVVMSPNGRQIAYVSTA 148

Query: 323 EG-KEQLYVMQSNGSDQKRISQDKEA--------SYFDPVWSPQGDLIAFTK-------- 365
            G K  ++VM      +  ++              YF P WSP G  IAF+         
Sbjct: 149 NGFKANIWVMDLESGKKWNLTDTATTAADDSLPNGYFRPSWSPDGQWIAFSSDRNSGWYG 208

Query: 366 -----FSG-------EKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKD 411
                F G       ++ +I  ++ +GS  R +V      L +P WS  G  ++F     
Sbjct: 209 HGDPIFQGVTGWEHTQELSIYAIRPNGSDFRSVVSKPGYCLGSPKWSLDGERIVFYEMTR 268

Query: 412 GDTGSKLYSIDLNGRNETLIN 432
            +T +      ++  N TL++
Sbjct: 269 ENTWNAHRPESIDSANSTLVS 289



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 38/216 (17%)

Query: 263 PRFSSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           PR + + K+ +  + +      ++Y  ++       L +       A++SPD   I F  
Sbjct: 41  PRKAPSDKKGIFYMNRIAPGTSELYVANVDGTDERPLLSNPIYEYHATFSPDGEWITFTG 100

Query: 321 DR--EGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAF-TKFSGEKFAIGVM 376
           +R  +G   +Y ++++GSD + +     +S  D  V SP G  IA+ +  +G K  I VM
Sbjct: 101 ERNGDGNSDIYRVRTDGSDLEELV--ATSSLEDGVVMSPNGRQIAYVSTANGFKANIWVM 158

Query: 377 KKDGSQERLLVEDSNLQA----------PTWSPSGRSLIFSRKKD------------GDT 414
             +  ++  L + +   A          P+WSP G+ + FS  ++            G T
Sbjct: 159 DLESGKKWNLTDTATTAADDSLPNGYFRPSWSPDGQWIAFSSDRNSGWYGHGDPIFQGVT 218

Query: 415 GSK------LYSIDLNGRN-ETLINTPAYA-SDPQW 442
           G +      +Y+I  NG +  ++++ P Y    P+W
Sbjct: 219 GWEHTQELSIYAIRPNGSDFRSVVSKPGYCLGSPKW 254


>gi|119509317|ref|ZP_01628467.1| WD-40 repeat protein [Nodularia spumigena CCY9414]
 gi|119466159|gb|EAW47046.1| WD-40 repeat protein [Nodularia spumigena CCY9414]
          Length = 1544

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 109/249 (43%), Gaps = 38/249 (15%)

Query: 167  TGEKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            TGE   FNS + F  +S  + +G    +  +  RDG  +  L   ++ +L E  FSPN Q
Sbjct: 976  TGE--GFNS-VAFSPDSTLIATGSWDKTAKIWSRDGKLLHTLDKHKEAVL-EVAFSPNSQ 1031

Query: 225  KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
             +A A++D  + ++++  D ++      +   +  + +  FS +GK  + +V  D  M +
Sbjct: 1032 LLATASWD--NTVKLWSRDGKLLHT---LDKHKDKVNSVTFSPDGK-LIATVGWDNTMKL 1085

Query: 285  YSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDR-------EGKE-QLYVMQSNG 335
            +++D +   T   T    +  S S+SPD  QI     DR       EGKE +  +   NG
Sbjct: 1086 WNLDGKELRT--FTGHKDMIWSVSFSPDGKQIATAGGDRTVKIWNLEGKELRTLIGHQNG 1143

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
             +               ++SP G LIA    SG+K       K    E L      + + 
Sbjct: 1144 VN-------------SVIFSPDGKLIATA--SGDKTVKLWNSKGKELETLYGHTDAVNSV 1188

Query: 396  TWSPSGRSL 404
             +SP G S+
Sbjct: 1189 AFSPDGTSI 1197


>gi|301164717|emb|CBW24276.1| putative exported peptidase [Bacteroides fragilis 638R]
          Length = 1095

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y   ++   T+++TNT        ++PD   +V+ S+R G  QLY       D+K+ +
Sbjct: 336 DVYVTSVEYKTTKQVTNTPCQERGIDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKQFT 395

Query: 343 QDKEA----------SYFDPVWSPQGDLIAF 363
              E           + F+P +SP G  IAF
Sbjct: 396 YATELKEERLTNSDIASFNPKYSPDGKEIAF 426



 Score = 41.6 bits (96), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 34/60 (56%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI++V +      ++T     + +  +SPDS QI F SDR G   ++++  +G + +R++
Sbjct: 45  DIFTVPVSGGKATQITTNPAFDTTPIWSPDSKQIAFASDRMGSMDVFIVSKDGGEPRRLT 104


>gi|300785363|ref|YP_003765654.1| beta-lactamase/prolyl oligopeptidase [Amycolatopsis mediterranei
           U32]
 gi|299794877|gb|ADJ45252.1| beta-lactamase/prolyl oligopeptidase [Amycolatopsis mediterranei
           U32]
          Length = 1107

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 47/227 (20%), Positives = 86/227 (37%), Gaps = 54/227 (23%)

Query: 263 PRFSSNGKR---ALISVQKDEAMD---IYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P  S +G+R    L +  +D   D   ++ V        RLT     ++  ++SPD +++
Sbjct: 19  PAVSPDGRRIAYVLRTADRDRDEDTRSLWVVPADGGEARRLTRGP-ADLEPAWSPDGTRL 77

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------------ 364
            F   ++G  QL+++ + G + ++++     +   PVW P G  IAF             
Sbjct: 78  AFLRAQDGPAQLWLLPTGGGEPEQVTTLPLGA-GTPVWRPDGAEIAFAAPVDLAADEGDD 136

Query: 365 ---------------KFSGEKFAIGVMK-----------KDGSQERLLVEDSNLQAPTWS 398
                          +   +    G+++             G   ++   D +   P WS
Sbjct: 137 DAARTRRASAPVVADRLDFKADGAGLLRTLRKHVHVLDVATGEVRQVTSGDWHAGDPAWS 196

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVG 444
           P G  L F    + DT       DL  R+   +  P   AS+P+ +G
Sbjct: 197 PDGARLAFPAGPEADT-------DLTFRSGAYVVEPGDRASEPRLIG 236



 Score = 39.7 bits (91), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 60/278 (21%), Positives = 104/278 (37%), Gaps = 69/278 (24%)

Query: 216 EPRFSPNQQKVAYA--TYD---DEDILRVYLMDT------RIDRAPKRIGNFRSMILAPR 264
            P  SP+ +++AY   T D   DED   ++++        R+ R P          L P 
Sbjct: 18  HPAVSPDGRRIAYVLRTADRDRDEDTRSLWVVPADGGEARRLTRGPAD--------LEPA 69

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF------ 318
           +S +G R      +D    ++ +       E++T       +  + PD ++I F      
Sbjct: 70  WSPDGTRLAFLRAQDGPAQLWLLPTGGGEPEQVTTLPLGAGTPVWRPDGAEIAFAAPVDL 129

Query: 319 --------------------------ESDREG-----KEQLYVMQ-SNGSDQKRISQDKE 346
                                     ++D  G     ++ ++V+  + G  ++  S D  
Sbjct: 130 AADEGDDDAARTRRASAPVVADRLDFKADGAGLLRTLRKHVHVLDVATGEVRQVTSGDWH 189

Query: 347 ASYFDPVWSPQGDLIAF-------TKFSGEKFAIGVMKKD-GSQERLLVEDSNL-QAPTW 397
           A   DP WSP G  +AF       T  +    A  V   D  S+ RL+   + +  A TW
Sbjct: 190 AG--DPAWSPDGARLAFPAGPEADTDLTFRSGAYVVEPGDRASEPRLIGSGAGMCGAVTW 247

Query: 398 SPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTP 434
           +  G +L+   ++D   G   L  I L+G   T +  P
Sbjct: 248 TTDGAALLAVGRRDTAPGHLGLLRIPLDGGETTDLAAP 285


>gi|320162104|ref|YP_004175329.1| putative S9 family peptidase [Anaerolinea thermophila UNI-1]
 gi|319995958|dbj|BAJ64729.1| putative S9 family peptidase [Anaerolinea thermophila UNI-1]
          Length = 668

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 94/212 (44%), Gaps = 32/212 (15%)

Query: 256 FRSMILA-PRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISAS 308
           +R  +LA P+ S +G+  + SVQ+ E  +      ++ V  +  +  + T     ++   
Sbjct: 12  YRFQVLADPQISPDGEHVVFSVQRVERKNEKKFSNLWVVPTRGGSAFQFTVGDHTDVHPV 71

Query: 309 YSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT- 364
           +SPD ++I F S+R  KE+   L+++   G + + + Q  E    + +WSP G  +  T 
Sbjct: 72  WSPDGNKIAFLSNRLDKEKPPALFIIPFGGGEARPLGQ-IEGEIGEILWSPDGRKLLLTV 130

Query: 365 ----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                     +   E+ ++G  ++    ERL  +   L    + P  R  ++    D  T
Sbjct: 131 RKTDEEVLQRRKDPERKSLGTPQR--HVERLFYK---LDGYGYLPKERWHLWV--MDAGT 183

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           G  +   D    +E    +P ++ D QW+ F+
Sbjct: 184 GRAMQLTDHPVWDE---RSPEWSPDGQWIAFI 212


>gi|60683198|ref|YP_213342.1| putative exported peptidase [Bacteroides fragilis NCTC 9343]
 gi|60494632|emb|CAH09433.1| putative exported peptidase [Bacteroides fragilis NCTC 9343]
          Length = 1095

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y   ++   T+++TNT        ++PD   +V+ S+R G  QLY       D+K+ +
Sbjct: 336 DVYVTSVEYKTTKQVTNTPCQERGIDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKQFT 395

Query: 343 QDKEA----------SYFDPVWSPQGDLIAF 363
              E           + F+P +SP G  IAF
Sbjct: 396 YATELKEERLTNSDIASFNPKYSPDGKEIAF 426



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 34/60 (56%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI++V +      ++T     + +  +SPDS QI F SDR G   ++++  +G + +R++
Sbjct: 45  DIFTVPVSGGKATQITTNPAFDTTPIWSPDSKQIAFASDRMGSMDVFIVSKDGGEPRRLT 104


>gi|53715261|ref|YP_101253.1| putative Tricorn-like protease [Bacteroides fragilis YCH46]
 gi|52218126|dbj|BAD50719.1| putative Tricorn-like protease [Bacteroides fragilis YCH46]
          Length = 1095

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y   ++   T+++TNT        ++PD   +V+ S+R G  QLY       D+K+ +
Sbjct: 336 DVYVTSVEYKTTKQVTNTPCQERGIDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKQFT 395

Query: 343 QDKEA----------SYFDPVWSPQGDLIAF 363
              E           + F+P +SP G  IAF
Sbjct: 396 YATELKEERLTNSDIASFNPKYSPDGKEIAF 426



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 34/60 (56%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI++V +      ++T     + +  +SPDS QI F SDR G   ++++  +G + +R++
Sbjct: 45  DIFTVPVSGGKATQITTNPAFDTTPIWSPDSKQIAFASDRMGSMDVFIVSKDGGEPRRLT 104


>gi|325297708|ref|YP_004257625.1| prolyl oligopeptidase family protein [Bacteroides salanitronis DSM
           18170]
 gi|324317261|gb|ADY35152.1| prolyl oligopeptidase family protein [Bacteroides salanitronis DSM
           18170]
          Length = 702

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 10/144 (6%)

Query: 308 SYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           S SPD  QI +        D      +Y M ++GS+ + ++   E     P W   G  I
Sbjct: 58  SVSPDGKQIAYTVSYYSVKDNASHTVIYTMNADGSNNRMLTATPENES-SPAWIKGGTKI 116

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF-SRKKDGDTGSKLY 419
           AF    G  + +  M  DG+  + L E   +++   +SP    ++F ++ K G   S LY
Sbjct: 117 AFLTPQGGSYQLWEMNPDGTGRKQLSEYKGDIEGFKFSPDETKVLFIAQVKYGKRTSDLY 176

Query: 420 SIDLNGRNETLINTPAYASDPQWV 443
             DL+  +  +IN   Y    +WV
Sbjct: 177 P-DLDKASGRVINDLMYKHWDEWV 199


>gi|322436470|ref|YP_004218682.1| peptidase S41 [Acidobacterium sp. MP5ACTX9]
 gi|321164197|gb|ADW69902.1| peptidase S41 [Acidobacterium sp. MP5ACTX9]
          Length = 1087

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 96/253 (37%), Gaps = 52/253 (20%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------FSS 267
           L +P  SP+  ++A+ +  D            I   P   G    ++  P       +S 
Sbjct: 25  LSDPTISPDGHEIAFVSGGD------------IWSVPAAGGEAHLLVTHPATESRPLYSP 72

Query: 268 NGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DRE 323
           +GK+ A IS +     +IY + L S   +RLT +   +   ++S D   I F S   D  
Sbjct: 73  DGKKLAFISTRTGNG-NIYILTLASGQLQRLTYSDVPDRLDAWSKDGQWIYFTSAIDDVA 131

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---------------TKFSG 368
           G+  ++ +++ G     ++ ++  + F+   SP G  IAF                    
Sbjct: 132 GQGDIFRVRTTGGTPLEVTHERYMNEFESSPSPDGSQIAFMAKGISASQWWRNGHAHIDE 191

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  +  +      ++LL  DS    P WS  G+SL +     G               E
Sbjct: 192 TELWLKPVGDSAPYKKLLPADSKHAWPMWSADGKSLFYMSDASG--------------AE 237

Query: 429 TLINTPAYASDPQ 441
            +  TPA ++ P+
Sbjct: 238 NIWETPAGSASPK 250



 Score = 40.0 bits (92), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 17/163 (10%)

Query: 214 LFEPRFSPNQQKVAYAT--YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           + +P++SP+   VAY     D    L ++  DT   R P  I    S   AP +S NGK 
Sbjct: 355 MSDPQWSPDSTSVAYIAERMDGSHQLELFSFDTLKAR-PLTIIPGESQ--APSWSPNGK- 410

Query: 272 ALISVQKDEAMDIYSV-DLQSNATER-------LTNTLFINISASYSPDSSQIVFES-DR 322
            L  V  ++ + + ++ D ++ A          +T+      S ++SPD+  + F S D 
Sbjct: 411 LLAYVHDNKDLHVITMPDPKAKAPSTVPLPDKIITSGALAQPSLAWSPDNQWVAFTSVDA 470

Query: 323 EGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAF 363
                L V+Q+ G +   I+   + E +Y    WSP G  I F
Sbjct: 471 RSFRNLNVIQAAGGEPHPITFLGNGETAYSRIAWSPDGKYILF 513



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 18/118 (15%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVW 354
           R+T T F  ++   SPD  ++V  +      QL+   + +G D +R+ + +  S  DP W
Sbjct: 308 RVTETSFRTLA--LSPDGKKVVVLA----HGQLFAASAKDGGDGQRV-KSEAVSMSDPQW 360

Query: 355 SPQGDLIAF--TKFSG----EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           SP    +A+   +  G    E F+   +K       L +     QAP+WSP+G+ L +
Sbjct: 361 SPDSTSVAYIAERMDGSHQLELFSFDTLKA----RPLTIIPGESQAPSWSPNGKLLAY 414


>gi|58700238|ref|ZP_00374720.1| tolB protein [Wolbachia endosymbiont of Drosophila ananassae]
 gi|58533246|gb|EAL57763.1| tolB protein [Wolbachia endosymbiont of Drosophila ananassae]
          Length = 65

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 31/49 (63%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           +I S+DL S  T+++T    I+ S S+SPD   + F SD  G +QLYV+
Sbjct: 6   NILSLDLSSKRTKKITKGSAISTSPSFSPDQKYMAFSSDISGSQQLYVI 54


>gi|119470702|ref|ZP_01613370.1| putative peptidase [Alteromonadales bacterium TW-7]
 gi|119446172|gb|EAW27450.1| putative peptidase [Alteromonadales bacterium TW-7]
          Length = 674

 Score = 42.7 bits (99), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 58/265 (21%), Positives = 101/265 (38%), Gaps = 74/265 (27%)

Query: 234 EDILRVYLMDTRID-RAPKRIGNFRS----------------MILAPRFSSNGKRALISV 276
           +D   VY +  R+D +  +++GN  S                M  +P  S +G+R     
Sbjct: 44  DDGKTVYFVRNRMDIKTDRKVGNIWSVDYKTKQMQPLTSGVHMDYSPVLSPDGQRLAFIS 103

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----------------- 319
            +D +  IY   L++ A  +++N      + S+SPDSSQ+VF                  
Sbjct: 104 TRDGSSQIYMKWLKTGAIAKISNLTSSPRAISWSPDSSQLVFSMFVPSKNTPPVNLPGKP 163

Query: 320 -----------------------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                                    ++G  QL+ + +NG + K+++ D+  +  D  +S 
Sbjct: 164 KGATWAEPAKFIDDVYYRADGGGYSQKGFNQLFTLDANGGNAKQLTSDEFDNAGDVSFSK 223

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQ-----------ERLLVEDSNLQAPTWSPSGRSLI 405
            G L+    +S  +   G +K   S+           E +   +   Q P  SP GR L 
Sbjct: 224 DGSLL---YYSANRHKNGELKPTNSEVYKLNLNTLAIEAVTNRNGPDQQPKVSPDGRYLA 280

Query: 406 FSRKKDGDT---GSKLYSIDLNGRN 427
           ++   D  T    ++LY  DL   N
Sbjct: 281 YTGYDDKRTNYENTQLYIRDLKTGN 305


>gi|254294875|ref|YP_003060898.1| amidohydrolase [Hirschia baltica ATCC 49814]
 gi|254043406|gb|ACT60201.1| amidohydrolase [Hirschia baltica ATCC 49814]
          Length = 1103

 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/140 (22%), Positives = 62/140 (44%), Gaps = 9/140 (6%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY +  +    + + +      S  +S D   + + SD  G + ++     G  +K+IS
Sbjct: 55  DIYIMSAEGGEAKAILSGPATQKSPQFSSDGKTLAYISDASGHDNIWTASVKGKKRKQIS 114

Query: 343 QDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMKK---DGSQERLLVEDS----NLQ 393
            ++      P WSP  + I     +    K     +++   DGS+ + +V+      ++Q
Sbjct: 115 FEERDIISSPAWSPSDEAIIAVVREPEASKVYSSTIREYYVDGSEPKHMVDAPGGRRDVQ 174

Query: 394 APTWSPSGRSLIFSRKKDGD 413
            P +SP G  L ++++  GD
Sbjct: 175 EPRYSPDGEYLYYTQRVGGD 194


>gi|229496034|ref|ZP_04389758.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229317126|gb|EEN83035.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 840

 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 316 IVFESDREGKEQLY--VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +++ S RE K + +  +M ++G   + I + KE  Y +  W PQ D + F +  G K  +
Sbjct: 223 VIYYSQRERKTEYFGRLMHADG---RLIRESKELVYAN--WLPQSDQLHFVRTEGSKRLL 277

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            V   +G+ E++L+ D       +SP  +++  +++  GD
Sbjct: 278 VVQSPEGASEKILLRDLPQGEYRFSPDAKTIYLAKEIKGD 317


>gi|213420647|ref|ZP_03353713.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 162

 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/144 (20%), Positives = 61/144 (42%), Gaps = 5/144 (3%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN + +    Q
Sbjct: 20  LHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQ 79

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSP 148
           +      + +   W++LG   ++ G V         V ++L D       ++ +  +   
Sbjct: 80  QPATAQEV-QPTAWSALGIDAVIVGLVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVN 138

Query: 149 ASW-RKIAHTISDDIYQSITGEKG 171
             W R   HT SD++++ +TG KG
Sbjct: 139 KQWLRYAGHTASDEVFEKLTGIKG 162


>gi|298675393|ref|YP_003727143.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Methanohalobium evestigatum Z-7303]
 gi|298288381|gb|ADI74347.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Methanohalobium evestigatum Z-7303]
          Length = 597

 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 36/155 (23%)

Query: 301 LFINIS---------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           LF+NI+         A++SP  +++ +  + +    LY + ++G+++ +I+ D    Y  
Sbjct: 344 LFLNITKERHIPDQGATWSPTGNKVSYIENGD----LYTINTDGTNRSKITSD-VGQY-- 396

Query: 352 PVWSPQGDLIAFTKFSG-EKFAIGVMKKDGS---------QERLLVEDSNLQAPTWSPSG 401
             W+P GD IA+   +G +K  I V   +G+          E+ L++D       WSP G
Sbjct: 397 -KWNPSGDYIAYITVNGSDKRPILVATPEGNKKTRISPGRHEKFLLKDGG-----WSPDG 450

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETL-INTPA 435
             L+F      D G  LY     G  + + I TP 
Sbjct: 451 SRLLFGSI---DYGRGLYVAKFEGYKKVMSIYTPT 482



 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 61/126 (48%), Gaps = 11/126 (8%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK---R 340
           IY V++      +++   + +   S SPD  +I+F +    K  LY+  S+G +++    
Sbjct: 290 IYMVNINGTGNRKISEKCYKDDVFSLSPDEEKILFTTFHRSK--LYISDSDGGNKRLFLN 347

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           I++++        WSP G+ +++ + +G+ + I     DG+    +  D  +    W+PS
Sbjct: 348 ITKERHIPDQGATWSPTGNKVSYIE-NGDLYTINT---DGTNRSKITSD--VGQYKWNPS 401

Query: 401 GRSLIF 406
           G  + +
Sbjct: 402 GDYIAY 407


>gi|114799589|ref|YP_759593.1| S9A/B/C family peptidase [Hyphomonas neptunium ATCC 15444]
 gi|114739763|gb|ABI77888.1| peptidase, S9A/B/C family [Hyphomonas neptunium ATCC 15444]
          Length = 696

 Score = 42.7 bits (99), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 7/110 (6%)

Query: 263 PRFSSNGK------RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P+ S +GK      R++  +   +   ++S+D  +     L        +  +SPD S++
Sbjct: 48  PQVSPDGKTIAYVRRSMDRMTDRDVGQLWSIDTGTGNHRPLVAGAEGAANPRWSPDGSRL 107

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++ S   GK +L V   +      ++Q  +A    PVWSP G  IAF+ F
Sbjct: 108 IYMSAAGGKPELRVFYPDTGRSHALAQFLQAPS-QPVWSPDGKYIAFSMF 156


>gi|225619584|ref|YP_002720841.1| hypothetical protein BHWA1_00641 [Brachyspira hyodysenteriae WA1]
 gi|225214403|gb|ACN83137.1| hypothetical protein BHWA1_00641 [Brachyspira hyodysenteriae WA1]
          Length = 2326

 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 85/184 (46%), Gaps = 28/184 (15%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE---GKEQLYVMQSNG---- 335
           DI++VD  +  T RLT +  I+ S S    S  IVF S R+   G   LY + + G    
Sbjct: 72  DIFAVDSYTLETYRLTRSPAIDTSVSIDDKSRYIVFSSTRDDAFGDIYLYKLYNLGIRTS 131

Query: 336 -SDQKRISQ------DKEASYFDPVWSPQGDLIAFT--KFSGEK--FAIGVMKKDGSQER 384
            ++ + + Q      D +    DPV S +G++IAF   +  G K  FA+    KD  +  
Sbjct: 132 KNNLENLEQSIVRLTDYKGYDTDPVVSHKGNIIAFVSDRDGGIKKLFAVKPNGKDVQK-- 189

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNET----LINTPAYAS 438
             + D    +PT+S     + F   K GD  S+L  +DL  N  NET    L +T  +  
Sbjct: 190 --LSDIEASSPTFSFDDTKIAFITSKIGDKYSQLAILDLTHNTNNETNLTILTDTETFKF 247

Query: 439 DPQW 442
           +P +
Sbjct: 248 NPTF 251


>gi|332662875|ref|YP_004445663.1| WD40-like beta Propeller containing protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332331689|gb|AEE48790.1| WD40-like beta Propeller containing protein [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 1088

 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 32/67 (47%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D++  D       R+T+T  +     +SPD   I F SDR G   +YV+  +G    R++
Sbjct: 53  DLWITDRTGGEARRITSTPAVESDPHFSPDGRWIAFTSDRTGSNSVYVVSIDGGTPTRLT 112

Query: 343 QDKEASY 349
               A++
Sbjct: 113 WHPSAAF 119



 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 72/169 (42%), Gaps = 17/169 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL---RVYLMDTRIDRAPKRIGNFR 257
           +N+++L+ ++  ++FE     +    A       DI         +TR +   KR+ N  
Sbjct: 260 SNVKWLSGNKGTLIFERDGYLHTIDAASGNAKQLDITVRGDFPWAETRWENVNKRVSNAA 319

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQI 316
                   S  GKR  +  + +    I++V + +  T  LT +  +      +SPD +++
Sbjct: 320 -------LSPTGKRVAMEARGE----IFTVPVANGDTRNLTRSAGVADRVPIWSPDGNRV 368

Query: 317 VFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            + SD   EG   L   Q   S  + IS  +    ++P WSP G  IAF
Sbjct: 369 AWFSDASGEGYALLIAAQDGLSAPRSISIGESKMAWEPTWSPDGKRIAF 417



 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 9/120 (7%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLL 386
           L++    G + +RI+    A   DP +SP G  IAFT       ++ V+  D G+  RL 
Sbjct: 54  LWITDRTGGEARRITS-TPAVESDPHFSPDGRWIAFTSDRTGSNSVYVVSIDGGTPTRLT 112

Query: 387 VEDSNLQAPTWSPSGRSLIF--SRKKDGDTGSKLYSIDLNGRNETLINTP-----AYASD 439
              S   A  W+  G+ +++  SR+      ++L+++   G   TL+  P     A+A D
Sbjct: 113 WHPSAAFARGWTNDGKRVLYASSRETAPSNYNRLWTVSTQGGPSTLLPAPWGFDGAFAPD 172


>gi|256421777|ref|YP_003122430.1| peptidase S41 [Chitinophaga pinensis DSM 2588]
 gi|256036685|gb|ACU60229.1| peptidase S41 [Chitinophaga pinensis DSM 2588]
          Length = 1076

 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 31/143 (21%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG------------KEQLYV 330
           +++   ++ N T+R+TNT     S ++SPD  ++V+ ++R G            +E  + 
Sbjct: 337 EVFVTSVEGNMTKRITNTPQQERSVAWSPDGKKLVYAAERNGNWDVYQTTIVRAEEPYFF 396

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             +   ++  I+ D E   F PV+SP G  IAF +   ++  + V      + R L+   
Sbjct: 397 AATLLKEEPLIATDAEE--FQPVFSPDGKEIAFVE---DRNVLRVYNIASKKSRTLL--- 448

Query: 391 NLQAPTWSPSGRSLIFSRKKDGD 413
                   P+GR+  +S   DGD
Sbjct: 449 --------PAGRNFSYS---DGD 460


>gi|116622459|ref|YP_824615.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225621|gb|ABJ84330.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 874

 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 39/176 (22%), Positives = 70/176 (39%), Gaps = 17/176 (9%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--------- 334
           I+  DL   AT RLT     N +  +SPDSS+++F + R G  + Y   ++         
Sbjct: 619 IWLTDLSRGATSRLTLDPGFNAAPVWSPDSSRLIFRTMRNGAIEFYQKSASLGGNEEAVL 678

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAI----GVMKKDGSQERLLVE 388
            +D  R+      S     WS  G  + +     SG +  +     +   +    R +  
Sbjct: 679 TTDTVRMVNGSSVSAMLTDWSSDGRFLIYDTPGLSGSQLWVVENPTLAPGNAKPVRFMSS 738

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            + L    +SP GR + ++  + G       ++ L+ R   +     Y  +P+W G
Sbjct: 739 ANALMHANFSPDGRLVAYTSNESGTYQVYCQTLPLSNRKWLVSTNGGY--EPRWRG 792


>gi|268679161|ref|YP_003303592.1| TolB domain protein [Sulfurospirillum deleyianum DSM 6946]
 gi|268617192|gb|ACZ11557.1| TolB domain protein [Sulfurospirillum deleyianum DSM 6946]
          Length = 422

 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 56/113 (49%), Gaps = 1/113 (0%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P+++ +QQ   Y T  +     +Y  D R   A K I +   MI+    S +G + L+++
Sbjct: 196 PKWANDQQNAFYYTSYNGAEPTIYHYDLRTG-ARKSIISSNGMIVCSDVSKDGSKLLLTM 254

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              +  DIY  D++S    ++T    I+++ ++  +  +I F SDR G   ++
Sbjct: 255 APKDQPDIYLYDVKSRKITKITEYAGIDVNGNFIDNDRRIAFVSDRLGNPDIF 307


>gi|270296907|ref|ZP_06203106.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270272894|gb|EFA18757.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 707

 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 13/163 (7%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYS 310
           N   M  A   +S G       Q+D A  I   D++    +R+T      +    S + S
Sbjct: 5   NLLLMSAAMTLASCGGTKDAGQQQDAATLIQRSDIKIEG-KRMTPEALWAMGRIGSVAVS 63

Query: 311 PDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           PD  QI +          +   +++VM ++GSD  +I+ D       P W   G  +AF 
Sbjct: 64  PDEKQIAYTVSYYSVPQNKSNSEVFVMNADGSDNTQITHDAWQE-GQPTWFKDGKKLAFL 122

Query: 365 KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
                   +  M  DGS  + L + + +++  ++SP G+ L+F
Sbjct: 123 CNESGSSQVWEMNPDGSGRKQLTQYEGDIEGFSFSPDGKKLLF 165


>gi|116625897|ref|YP_828053.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229059|gb|ABJ87768.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 912

 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 12/106 (11%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDLIAF 363
           + SPD   + F S+R G+ QL++ Q  G +  +++   E    AS+F     P G  I +
Sbjct: 357 TISPDGKFVAFISERSGRRQLWLQQVGGGEPIQLTHSNETVSSASFF-----PDGTRIVY 411

Query: 364 TKFSGEK---FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           +  S ++     I V+   G Q R L+  ++      SP G+ +++
Sbjct: 412 STASSDRRRTSTIEVIPTLGGQSRSLLNGTDFGGVALSPDGQRIVY 457


>gi|255011806|ref|ZP_05283932.1| putative exported peptidase [Bacteroides fragilis 3_1_12]
 gi|313149645|ref|ZP_07811838.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313138412|gb|EFR55772.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 1093

 Score = 42.7 bits (99), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y   ++   T+++TNT        ++PD   +V+ S+R G  QLY       D+K+ +
Sbjct: 336 DVYVTSVEYKTTKQITNTPCQERGIDFAPDGRSLVYASERGGLWQLYTSSIVRKDEKQFT 395

Query: 343 QDKEA----------SYFDPVWSPQGDLIAF 363
              E           + F+P +SP G  +AF
Sbjct: 396 YATELKEERLTNSDIASFNPKYSPDGKEVAF 426



 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 33/60 (55%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI++V +      ++T     + +  +SPDS QI F SDR G   ++++   G + +R++
Sbjct: 45  DIFTVPVSGGKATQITTNPAFDTTPVWSPDSKQIAFASDRMGSLDVFIVSKEGGEPRRLT 104


>gi|160890339|ref|ZP_02071342.1| hypothetical protein BACUNI_02780 [Bacteroides uniformis ATCC 8492]
 gi|156860071|gb|EDO53502.1| hypothetical protein BACUNI_02780 [Bacteroides uniformis ATCC 8492]
          Length = 707

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 13/163 (7%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYS 310
           N   M  A   +S G       Q+D A  I   D++    +R+T      +    S + S
Sbjct: 5   NLLLMSAAMTLASCGGTKDAGQQQDAATLIQRSDIKIEG-KRMTPEALWAMGRIGSVAVS 63

Query: 311 PDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           PD  QI +          +   +++VM ++GSD  +I+ D       P W   G  +AF 
Sbjct: 64  PDEKQIAYTVSYYSVPQNKSNSEVFVMNADGSDNTQITHDAWQE-GQPTWFKDGKKLAFL 122

Query: 365 KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
                   +  M  DGS  + L + + +++  ++SP G+ L+F
Sbjct: 123 CNESGSSQVWEMNPDGSGRKQLTQYEGDIEGFSFSPDGKKLLF 165


>gi|32564215|ref|NP_496867.2| Temporarily Assigned Gene name family member (tag-10)
           [Caenorhabditis elegans]
 gi|25809200|emb|CAB05698.2| C. elegans protein C31C9.1a, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|25809223|emb|CAB02296.2| C. elegans protein C31C9.1a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 473

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI+ VD   N  +RLT++   +     SPD ++I F S R G  +LY+M  +G +  +I+
Sbjct: 197 DIFKVDRYGNFVQRLTDSPGYDAEGVVSPDGTKIAFTSIRSGDLELYIMDIDGKNLIQIT 256

Query: 343 QD---KEASYFDP 352
            +      S+F P
Sbjct: 257 NELGYDGGSFFTP 269


>gi|332533051|ref|ZP_08408921.1| putative peptidase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332037530|gb|EGI73983.1| putative peptidase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 672

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 22/153 (14%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +I+SVD ++   + LT+ + ++ S   SPD  ++ F S R+G  Q+Y+         +IS
Sbjct: 64  NIWSVDYKTKQMQPLTSGVHMDYSPVLSPDGQRLAFISTRDGSSQIYIKWLKTGAMAKIS 123

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            +  +S     WSP  + + F+ F  S     + +  K              +  TW+  
Sbjct: 124 -NLTSSPRSITWSPDSNQLIFSMFVPSANSAPVSLPGKP-------------KGATWAEP 169

Query: 401 GRSL--IFSRKKDGDTG----SKLYSIDLNGRN 427
            + +  ++ R   G       S+L+SID NG N
Sbjct: 170 AKFIDDVYYRSDGGGYTQKGFSQLFSIDANGGN 202



 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 43/229 (18%)

Query: 234 EDILRVYLMDTRID-RAPKRIGNFRS----------------MILAPRFSSNGKRALISV 276
           ED   VY +  R+D +  +++GN  S                M  +P  S +G+R     
Sbjct: 42  EDGKTVYFVRNRMDIKTDRKVGNIWSVDYKTKQMQPLTSGVHMDYSPVLSPDGQRLAFIS 101

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D +  IY   L++ A  +++N      S ++SPDS+Q++F         ++V  +N +
Sbjct: 102 TRDGSSQIYIKWLKTGAMAKISNLTSSPRSITWSPDSNQLIFS--------MFVPSANSA 153

Query: 337 DQKRISQDKEASYFDPV-------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                 + K A++ +P        +   G       FS + F+I     +G   + L  D
Sbjct: 154 PVSLPGKPKGATWAEPAKFIDDVYYRSDGGGYTQKGFS-QLFSI---DANGGNAKQLTHD 209

Query: 390 S--NLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNGRNETLI 431
              N    ++S  G+SL FS  +  +     T +++Y +DL  +  T I
Sbjct: 210 EFDNAGDVSFSNDGKSLYFSTNRHKNNQLKFTNNEIYKLDLASQTITEI 258


>gi|284040573|ref|YP_003390503.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
 gi|283819866|gb|ADB41704.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
          Length = 735

 Score = 42.4 bits (98), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 20/148 (13%)

Query: 308 SYSPDSSQIVF-----------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           S SPD  + V+           + + E K  +Y+      D K +++  E++    VWSP
Sbjct: 39  SLSPDGQRAVYALATIEPNPDNKEEYEYKTHVYLTGLKPGDSKALTRGPESAR-QAVWSP 97

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTG 415
            G  IAF +    K  I +M  DG +   L   +     P WSP G  + F+    G T 
Sbjct: 98  DGQRIAFVRTVKGKGQIFIMPLDGGEAWQLTNTTYGASTPLWSPDGTRISFT---SGITM 154

Query: 416 SKLYSIDL--NGRNETL--INTPAYASD 439
           +++ +  L   G+N  L  +  P +A++
Sbjct: 155 AQMLTDSLVNPGKNTPLWSLEKPGFANN 182



 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 12/111 (10%)

Query: 265 FSSNGKRALISVQKDEA-----------MDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            S +G+RA+ ++   E              +Y   L+   ++ LT        A +SPD 
Sbjct: 40  LSPDGQRAVYALATIEPNPDNKEEYEYKTHVYLTGLKPGDSKALTRGPESARQAVWSPDG 99

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +I F    +GK Q+++M  +G +  +++     +   P+WSP G  I+FT
Sbjct: 100 QRIAFVRTVKGKGQIFIMPLDGGEAWQLTNTTYGAS-TPLWSPDGTRISFT 149


>gi|91216538|ref|ZP_01253504.1| Acylaminoacyl-peptidase [Psychroflexus torquis ATCC 700755]
 gi|91185332|gb|EAS71709.1| Acylaminoacyl-peptidase [Psychroflexus torquis ATCC 700755]
          Length = 705

 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/167 (22%), Positives = 79/167 (47%), Gaps = 17/167 (10%)

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-------GKEQLYV 330
           +D    I+ +  +     +LT+      S+S++PD   I++  ++          EQ++ 
Sbjct: 218 QDGYSHIFVISAEGGTARQLTSGSHQFGSSSWTPDGKHILYTVNKSEDAEVDPNNEQIFE 277

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFA-IGVMKKDGSQERL 385
                   K+++  +   ++ P  SP G  IA+T    KF G +   + +M +DG++  +
Sbjct: 278 QHIETGVSKQLTSTR-GPFYSPKVSPDGKHIAYTGFDDKFVGYQLTKLYLMSRDGAELEI 336

Query: 386 LVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           L +    ++ + TW+   +S+ F   ++G+  SK+  I+L G   T+
Sbjct: 337 LSKGFAQDISSITWAKDAKSIYFRFDEEGN--SKVGQINLKGEVSTV 381



 Score = 37.4 bits (85), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 35/158 (22%), Positives = 69/158 (43%), Gaps = 21/158 (13%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S  G +   +  +D +  +Y   ++S  T  LTN      + S+SPD +Q++F      
Sbjct: 120 WSPQGDKFAFTSNQDGSNQLYVYWVESKTTAALTNFTESPSNISWSPDGTQLLFSK---- 175

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFA------IGVM 376
               +V +S+ + Q +I      +     W  + D+I  A  +  G  +       I V+
Sbjct: 176 ----FVPESSKAIQPKIPSPPNGA----EWEKEADVIDKAVYRRDGGGYVQDGYSHIFVI 227

Query: 377 KKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGD 413
             +G   R L   S+   + +W+P G+ ++++  K  D
Sbjct: 228 SAEGGTARQLTSGSHQFGSSSWTPDGKHILYTVNKSED 265


>gi|32564217|ref|NP_871957.1| Temporarily Assigned Gene name family member (tag-10)
           [Caenorhabditis elegans]
 gi|25809201|emb|CAD57688.1| C. elegans protein C31C9.1b, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|25809224|emb|CAD57698.1| C. elegans protein C31C9.1b, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 455

 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI+ VD   N  +RLT++   +     SPD ++I F S R G  +LY+M  +G +  +I+
Sbjct: 197 DIFKVDRYGNFVQRLTDSPGYDAEGVVSPDGTKIAFTSIRSGDLELYIMDIDGKNLIQIT 256

Query: 343 QD---KEASYFDP 352
            +      S+F P
Sbjct: 257 NELGYDGGSFFTP 269


>gi|289642645|ref|ZP_06474786.1| serine/threonine protein kinase [Frankia symbiont of Datisca
           glomerata]
 gi|289507554|gb|EFD28512.1| serine/threonine protein kinase [Frankia symbiont of Datisca
           glomerata]
          Length = 740

 Score = 42.4 bits (98), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 73/185 (39%), Gaps = 18/185 (9%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + DT+    P  +G  R  +L     S+   +L+++  D +     +     A E +
Sbjct: 476 RLTVDDTKPAALPVIVGPQRKTVLYTVIDSS--PSLVAIAADGSGAPMPLFTSGPAAELV 533

Query: 298 TNTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
              +  +  AS  P    +V  + R   +G   LYV   +GS  +R+  +  A   DP W
Sbjct: 534 ---IAPDARASVDPTGRFVVIRAVRGPNDGLTGLYVAAVDGSSVRRL--NVPAGATDPSW 588

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--------PTWSPSGRSLIF 406
           SP GD I F   SG      +   D        +   L          PTWSP G+ + F
Sbjct: 589 SPTGDRIVFFVGSGGVDGGALFTIDADPAAAGAKPVQLTPGTEGFDADPTWSPDGKKVAF 648

Query: 407 SRKKD 411
            R  D
Sbjct: 649 RRAFD 653



 Score = 37.0 bits (84), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 20/148 (13%)

Query: 312 DSSQIVFESDREGKEQLYVMQSN-----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           D   +V+ S++EG+  +Y ++       G  Q+    D + +    +  PQ   + +T  
Sbjct: 444 DDDTLVYSSEQEGRRAIYSLRVGPDGRPGQPQRLTVDDTKPAALPVIVGPQRKTVLYTVI 503

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQA---------PTWSPSGRSLIFSRKK---DGDT 414
                 + +   DGS   + +  S   A          +  P+GR ++    +   DG T
Sbjct: 504 DSSPSLVAI-AADGSGAPMPLFTSGPAAELVIAPDARASVDPTGRFVVIRAVRGPNDGLT 562

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQW 442
           G  LY   ++G +   +N PA A+DP W
Sbjct: 563 G--LYVAAVDGSSVRRLNVPAGATDPSW 588


>gi|218921792|emb|CAW30777.1| P52CeGA [Caenorhabditis elegans]
          Length = 460

 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI+ VD   N  +RLT++   +     SPD ++I F S R G  +LY+M  +G +  +I+
Sbjct: 184 DIFKVDRYGNFVQRLTDSPGYDAEGVVSPDGTKIAFTSIRSGDLELYIMDIDGKNLIQIT 243

Query: 343 QD---KEASYFDP 352
            +      S+F P
Sbjct: 244 NELGYDGGSFFTP 256


>gi|116626667|ref|YP_828823.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229829|gb|ABJ88538.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 849

 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 3/83 (3%)

Query: 355 SPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP+GD IAF    + G+  ++ V+   G ++ L  + ++LQ   WSP G  + F+  K+G
Sbjct: 473 SPKGDRIAFADHYYYGDDGSVAVVNLQGEKKTLSSKFNSLQGIAWSPDGDEVWFTGAKNG 532

Query: 413 DTGSKLYSIDLNGRNETLINTPA 435
                +Y++ L G+   +   P 
Sbjct: 533 GQ-RAVYAVTLGGKERLIFRAPG 554


>gi|166363202|ref|YP_001655475.1| hypothetical protein MAE_04610 [Microcystis aeruginosa NIES-843]
 gi|166085575|dbj|BAG00283.1| hypothetical protein MAE_04610 [Microcystis aeruginosa NIES-843]
          Length = 170

 Score = 42.4 bits (98), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 14/114 (12%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-----QDKEASYFDPVWSPQGDLIA 362
           SYS D   + F SDR G+  +Y+       +KR+         ++S   P  +  G LIA
Sbjct: 51  SYSADGRYLAFASDRSGRRSIYLFD---LQEKRLVNLPNLNRGDSSQDQPSLNADGRLIA 107

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDG 412
           +   S E+    VM  D SQ R  +  +NL+     PT S  GR + F   +DG
Sbjct: 108 Y--ISSERGKSDVMVYDRSQSRATLLTANLRGSVRNPTISGDGRQIAFETNQDG 159


>gi|160882655|ref|ZP_02063658.1| hypothetical protein BACOVA_00608 [Bacteroides ovatus ATCC 8483]
 gi|156111970|gb|EDO13715.1| hypothetical protein BACOVA_00608 [Bacteroides ovatus ATCC 8483]
          Length = 1094

 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 12/92 (13%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--- 339
           D+Y   +    T+++TNT     + S++PD   +V+ S+R+G  QLY       ++K   
Sbjct: 335 DVYVTSIDYKTTKQITNTPDQERNISFAPDGRTLVYSSERDGLWQLYTSTIVRKEEKQFT 394

Query: 340 --------RISQDKEASYFDPVWSPQGDLIAF 363
                   R++  K AS F P +SP G  +AF
Sbjct: 395 YATELKEERLTNSKVAS-FQPQFSPDGKEVAF 425



 Score = 40.4 bits (93), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V        ++T     +    +SPDS QI F SDR G   ++V+ S G   +R++
Sbjct: 45  DIYTVPSTGGRATQITTNPAFDTEPVWSPDSKQIAFASDRMGSLDVFVVSSEGGTPQRLT 104


>gi|20090401|ref|NP_616476.1| hypothetical protein MA1543 [Methanosarcina acetivorans C2A]
 gi|19915411|gb|AAM04956.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 576

 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 33/148 (22%)

Query: 308 SYSPDSSQIVFESDREGKEQL--YVMQSNGSDQKRISQDKEASYFD------------PV 353
           S SPD  +I+  S       L  Y+  ++GS+ K        S++D              
Sbjct: 255 SLSPDRKKILLVSGLPDSFDLHTYISDTDGSNLK-----GNVSFYDGDNPEDTNILTKEY 309

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           W P G L+       +   + +++ + + +RLL E  N   P W P G+ ++F   K+  
Sbjct: 310 WQPNGSLL----LVNQNRNLYIVEGNENNKRLLYE-GNASEPQWFPDGKKILFVENKN-- 362

Query: 414 TGSKLYSIDLNGRNETLIN----TPAYA 437
              KLYSID++G N + I     TP+++
Sbjct: 363 ---KLYSIDIDGTNLSFITNFGPTPSHS 387


>gi|260173877|ref|ZP_05760289.1| putative exported peptidase [Bacteroides sp. D2]
 gi|315922140|ref|ZP_07918380.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696015|gb|EFS32850.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 1094

 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 12/92 (13%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--- 339
           D+Y   +    T+++TNT     + S++PD   +V+ S+R+G  QLY       ++K   
Sbjct: 335 DVYVTSIDYKTTKQITNTPDQERNISFAPDGRTLVYSSERDGLWQLYTSTIVRKEEKQFT 394

Query: 340 --------RISQDKEASYFDPVWSPQGDLIAF 363
                   R++  K AS F P +SP G  +AF
Sbjct: 395 YATELKEERLTNSKVAS-FQPQFSPDGKEVAF 425



 Score = 40.4 bits (93), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V        ++T     +    +SPDS QI F SDR G   ++V+ S G   +R++
Sbjct: 45  DIYTVPSTGGRATQITTNPAFDTEPVWSPDSKQIAFASDRMGSLDVFVVSSEGGAPQRLT 104


>gi|218782212|ref|YP_002433530.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Desulfatibacillum alkenivorans AK-01]
 gi|218763596|gb|ACL06062.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Desulfatibacillum alkenivorans AK-01]
          Length = 610

 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 118/277 (42%), Gaps = 53/277 (19%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFS-PNQQKVAY----ATYDDEDILRVYLMD---- 243
           +CV++ DG     LT   D+      F  PN  KV +    A+  + +I  V +      
Sbjct: 90  ICVINADGTGFTRLT-DNDRCDSHASFVWPNNAKVVFQRNVASSGNGEIWIVNVDGSNPT 148

Query: 244 --TRIDRAPKRIGNFRSMILAPRFSSNGK----RALISVQKDEA----MDIYSVDLQSNA 293
             T+    P  +G   +    P  S +G     R  +      A    MDI   +++  A
Sbjct: 149 SLTQAHNGP--MGGASAGENNPMVSPDGTKVAFRGCVPASDGYAHLFVMDIDGANVKDVA 206

Query: 294 TERLTNTLFINISA-SYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQK-RISQDKEA-- 347
                N   I+IS   +SPDS  + F++  E  G  +++ ++++G+    ++S   +A  
Sbjct: 207 A---YNDRIIDISHHCWSPDSKWVCFKACDESVGDARIFKVKADGTAAPVKLSPADDAMP 263

Query: 348 -SYFD------PVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVE--------- 388
            ++ D      P WSP G  I+ + ++GE +    I +M  DG   + ++          
Sbjct: 264 AAWNDWFCQNWPRWSPDGKWISTSLYTGENYNDKKIVIMDSDGQNMKTIMAQDGDDDGDN 323

Query: 389 -DSNLQAPTWSPSGRSLIFSRK--KDGDTGSKLYSID 422
            D   Q+ TWSP  + L++S     +GDT   + ++D
Sbjct: 324 YDWIHQSGTWSPDSKWLVYSMNTVAEGDTALCISNVD 360


>gi|322370480|ref|ZP_08045038.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
 gi|320549897|gb|EFW91553.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
          Length = 595

 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 6/124 (4%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRI 341
           ++S+D       RLT         S SP  S++VF  D    E  QLY    +   +  +
Sbjct: 40  VWSLDEPGAFPSRLTAHDERVSFVSASPTRSEVVFGMDTGSDEHDQLYRYDLDSGTETAL 99

Query: 342 SQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTW 397
           +   EA +    WSP GD IAFT  +  G  F + V  +D ++  L+ E     L    W
Sbjct: 100 TATPEAIHLWGAWSPDGDRIAFTANRREGSTFDVYVQGRDDAEATLVHEGPGGFLSVEAW 159

Query: 398 SPSG 401
              G
Sbjct: 160 GEPG 163


>gi|237718429|ref|ZP_04548910.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229452362|gb|EEO58153.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 1094

 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 12/92 (13%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--- 339
           D+Y   +    T+++TNT     + S++PD   +V+ S+R+G  QLY       ++K   
Sbjct: 335 DVYVTSIDYKTTKQITNTPDQERNISFAPDGRTLVYSSERDGLWQLYTSTIVRKEEKQFT 394

Query: 340 --------RISQDKEASYFDPVWSPQGDLIAF 363
                   R++  K AS F P +SP G  +AF
Sbjct: 395 YATELKEERLTNSKVAS-FQPQFSPDGKEVAF 425



 Score = 40.0 bits (92), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V        ++T     +    +SPDS QI F SDR G   ++V+ S G   +R++
Sbjct: 45  DIYTVPSTGGRATQITTNPAFDTEPVWSPDSRQIAFASDRMGSLDVFVVSSEGGAPQRLT 104


>gi|269925369|ref|YP_003321992.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermobaculum terrenum ATCC BAA-798]
 gi|269789029|gb|ACZ41170.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermobaculum terrenum ATCC BAA-798]
          Length = 631

 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRI 341
           IY  D+ +  +++ T+    +    +SPDS+++ F SDRE + +  L+ +  +G +  ++
Sbjct: 48  IYVADITTGESKQFTSGPGADACPRWSPDSNKLAFISDREEEARFDLFTIDVHGGEAIKL 107

Query: 342 SQDKEASYFDPVWSPQGDLIAF 363
           + D E S  D  WSP G  I  
Sbjct: 108 A-DLEGSVLDLRWSPDGRYIGL 128


>gi|254505723|ref|ZP_05117869.1| peptidase, S41 family [Vibrio parahaemolyticus 16]
 gi|219551376|gb|EED28355.1| peptidase, S41 family [Vibrio parahaemolyticus 16]
          Length = 1080

 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 27/146 (18%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFT--KF 366
           SPD  +I F        Q++++ +NG +   ++      Y D PVWSP G  IAF   +F
Sbjct: 42  SPDGEKIAFTY----AGQIWLISANGGEATPLTGSD--VYSDHPVWSPDGQSIAFQSKRF 95

Query: 367 -SGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGS-------- 416
            SG+ F + V    G Q + L   S+   P  +S  G  ++FS ++ GD+ +        
Sbjct: 96  GSGDVFIVPVT---GGQAKRLTYHSSADVPYEFSSDGSEVLFSSRRLGDSDATLNNGFMG 152

Query: 417 ----KLYSIDL-NGRNETLINTPAYA 437
               +LYS+    GR + L++ P  A
Sbjct: 153 NSSKRLYSVSSEGGREKLLLSNPVSA 178


>gi|114569665|ref|YP_756345.1| peptidase S9 prolyl oligopeptidase [Maricaulis maris MCS10]
 gi|114340127|gb|ABI65407.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Maricaulis maris MCS10]
          Length = 701

 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 9/112 (8%)

Query: 306 SASYSPDSSQIVF-------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           + S SPD  ++ +       +SD+  +  +++++++GS  + +S D  AS   P WSP G
Sbjct: 54  APSISPDGERVAYVRRTNDVKSDQT-RSSIWLVRADGSHHEPLSADGAAS-GSPRWSPDG 111

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
             +A+T       ++    +DGS   +           WSP G  L +S  K
Sbjct: 112 QTLAYTYAGEAGVSLRTRSRDGSDSLVTELPGAPGGLAWSPDGNRLAWSMFK 163


>gi|299149075|ref|ZP_07042137.1| MdsD protein [Bacteroides sp. 3_1_23]
 gi|298513836|gb|EFI37723.1| MdsD protein [Bacteroides sp. 3_1_23]
          Length = 1094

 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 12/92 (13%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--- 339
           D+Y   +    T+++TNT     + S++PD   +V+ S+R+G  QLY       ++K   
Sbjct: 335 DVYVTSIDYKTTKQITNTPDQERNISFAPDGRTLVYSSERDGLWQLYTSTIVRKEEKQFT 394

Query: 340 --------RISQDKEASYFDPVWSPQGDLIAF 363
                   R++  K AS F P +SP G  +AF
Sbjct: 395 YATELKEERLTNSKVAS-FQPQFSPDGKEVAF 425



 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V        ++T     +    +SPDS QI F SDR G   ++V+ S G   +R++
Sbjct: 45  DIYTVPSTGGRATQITTNPAFDTEPVWSPDSKQIAFASDRMGSLDVFVVSSEGGAPQRLT 104


>gi|293371423|ref|ZP_06617854.1| WD40-like protein [Bacteroides ovatus SD CMC 3f]
 gi|292633620|gb|EFF52178.1| WD40-like protein [Bacteroides ovatus SD CMC 3f]
          Length = 1094

 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 12/92 (13%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--- 339
           D+Y   +    T+++TNT     + S++PD   +V+ S+R+G  QLY       ++K   
Sbjct: 335 DVYVTSIDYKTTKQITNTPDQERNISFAPDGRTLVYSSERDGLWQLYTSTIVRKEEKQFT 394

Query: 340 --------RISQDKEASYFDPVWSPQGDLIAF 363
                   R++  K AS F P +SP G  +AF
Sbjct: 395 YATELKEERLTNSKVAS-FQPQFSPDGKEVAF 425



 Score = 40.0 bits (92), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V        ++T     +    +SPDS QI F SDR G   ++V+ S G   +R++
Sbjct: 45  DIYTVPSTGGRATQITTNPAFDTEPVWSPDSRQIAFASDRMGSLDVFVVSSEGGAPQRLT 104


>gi|163788202|ref|ZP_02182648.1| putative Tricorn-like protease [Flavobacteriales bacterium ALC-1]
 gi|159876522|gb|EDP70580.1| putative Tricorn-like protease [Flavobacteriales bacterium ALC-1]
          Length = 1076

 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 15/106 (14%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           FR+  ++P    NG++   +       DIY V +      RLT     +    +S D S+
Sbjct: 29  FRNTAISP----NGQQIAFTYN----ADIYLVSVNGGKATRLTTHSDYDTKPVWSHDGSK 80

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRI---SQDKEASYF----DPVW 354
           I F S+R G   ++V+ SNG + KR+   S D  A+ F    D +W
Sbjct: 81  IAFSSNRHGNFDVFVIASNGGNIKRLTFHSADDWATDFSQKDDEIW 126



 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 83/206 (40%), Gaps = 26/206 (12%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           G  R M  +P    NGK  LI + +    D+++  +  + T RLTNT     S   S D 
Sbjct: 314 GGVREMKPSP----NGKE-LIFIYRG---DVFATSVDGSLTRRLTNTPEQERSIDISADG 365

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQ----------DKEASYFDPVWSPQGDLIAF 363
             IV+  +R     LY    +  D+K  +           + +A  F P +SP GD +A+
Sbjct: 366 RTIVYAGERNNSWNLYTQTLSNKDEKYFTNALELKEAILLENKAETFQPKFSPSGDDVAY 425

Query: 364 TKFSGEKFAIGVMKKD----GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +   +   I +  K      + E+        Q   WSP G+    +   D     ++ 
Sbjct: 426 LEDRTKLKTINLKSKKITSIHNGEKHFSYADGDQDFEWSPDGKWFAITFYPDRYWVGEIG 485

Query: 420 SIDLNGRNETLINTPAYA-SD--PQW 442
            +  NG ++ LIN      SD  PQW
Sbjct: 486 IVSANG-DQKLINVSKSGFSDFYPQW 510



 Score = 36.6 bits (83), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 14/138 (10%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SP+  QI F  + +    +Y++  NG    R++   +     PVWS  G  IAF+     
Sbjct: 35  SPNGQQIAFTYNAD----IYLVSVNGGKATRLTTHSDYDT-KPVWSHDGSKIAFSSNRHG 89

Query: 370 KFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-------KLYSI 421
            F + V+  +G   +RL    ++  A  +S     + F+  +  +  S       +LYS+
Sbjct: 90  NFDVFVIASNGGNIKRLTFHSADDWATDFSQKDDEIWFNSIRLDNQKSMLFHQLGELYSV 149

Query: 422 DLNGR-NETLINTPAYAS 438
            LN    + L++ PAY +
Sbjct: 150 SLNAELPKQLLSMPAYEA 167


>gi|94967825|ref|YP_589873.1| lysine decarboxylase transcriptional regulator, CadC [Candidatus
           Koribacter versatilis Ellin345]
 gi|94549875|gb|ABF39799.1| lysine decarboxylase transcriptional regulator, CadC [Candidatus
           Koribacter versatilis Ellin345]
          Length = 724

 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 8/116 (6%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERL 385
           L+  + +G+D +++++    + F P WSP G  IAF     +G+ +   V+   G   +L
Sbjct: 498 LWRSRVDGTDAQKLTEAPMRA-FVPKWSPDGQSIAFRANFAAGKPWQTYVISSKGGVAQL 556

Query: 386 LV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           +  E SN+  P W+  G  LI   + D      L   DL+  +   I    + SDP
Sbjct: 557 VASELSNVGGPGWTADGHGLILVGEHD----ESLRIFDLHSGSSKFIPNSQHMSDP 608


>gi|51893240|ref|YP_075931.1| acylamino-acid-releasing enzyme [Symbiobacterium thermophilum IAM
           14863]
 gi|51856929|dbj|BAD41087.1| acylamino-acid-releasing enzyme [Symbiobacterium thermophilum IAM
           14863]
          Length = 610

 Score = 42.4 bits (98), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 25/249 (10%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDDED 235
           +LFVS+  +SG  + +L  +   G   R LT   +  + E  F+ +  ++A+ A +  ++
Sbjct: 30  VLFVSD--ISG--QFNLWRVASQGGWPRQLTLFTEDSVREAIFNKDGSRIAFLADHHGDE 85

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALIS--VQKDEAMDIYSVDLQSN 292
             +VYLMD  +   P+RI +   +  +   FS  G+    +      + +DIY  DL++ 
Sbjct: 86  QFQVYLMDA-VGGWPERITDRPDVQYSLGGFSPCGRYLAFAGNAANPQDVDIYIYDLETK 144

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR---ISQDKEASY 349
            T +LT    +  + S+SPD S+I+         Q  ++    + + R     + +E  +
Sbjct: 145 ETRQLTPGGGLRYAFSFSPDGSRILAVQFYGNTNQDLLLVDVATGEIRNLTAHEGREVKF 204

Query: 350 FDPVWSPQGDLIAFTKFSGEKF-AIG-----------VMKKDGSQERL-LVEDSNLQAPT 396
           F   W   G    F    G +F AIG           V+  D   E + L  D  L A  
Sbjct: 205 FPGPWLKDGSGFYFATNDGREFQAIGFYSLAEDRWSYVLTADWDIEGVALSADQRLMAYV 264

Query: 397 WSPSGRSLI 405
            + +GRS++
Sbjct: 265 VNEAGRSVV 273


>gi|312881019|ref|ZP_07740819.1| hypothetical protein Apau_2301 [Aminomonas paucivorans DSM 12260]
 gi|310784310|gb|EFQ24708.1| hypothetical protein Apau_2301 [Aminomonas paucivorans DSM 12260]
          Length = 319

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 11/120 (9%)

Query: 310 SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-- 366
           SP+ +++ F  SD  G   + V+       + +    + SY  P WSP G L+ F  +  
Sbjct: 75  SPEGTRVAFTRSDSRGGRTVAVLDLENRSLRVLPLPGDNSY-GPRWSPDGKLLVFNHWDR 133

Query: 367 SGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               + +GV   DG+   L       + +P W P G SL     +       LY  DL+G
Sbjct: 134 KASNWTLGVAAPDGTGLHLFPSLPGGVYSPAWDPRGESLYAQDLR------TLYRFDLSG 187


>gi|114775409|ref|ZP_01450977.1| hypothetical protein SPV1_03753 [Mariprofundus ferrooxydans PV-1]
 gi|114553520|gb|EAU55901.1| hypothetical protein SPV1_03753 [Mariprofundus ferrooxydans PV-1]
          Length = 363

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 18/131 (13%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
           + SPD S++VF         L++M ++GSD  +++  +      PVWSP G  IAFT   
Sbjct: 215 ALSPDGSRLVFTMQDGHFWHLFMMNTDGSDLVQLTSGEHVDA-QPVWSPDGSWIAFTSNR 273

Query: 367 ---------------SGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
                              + I ++ +DGS   RL    ++  AP+++ +GR    S +K
Sbjct: 274 GDEDEDDKDGGHSSKQQRNWDIWLIGRDGSNLTRLTTNKASDGAPSFANNGRIYFHSDRK 333

Query: 411 DGDTGSKLYSI 421
                SK + +
Sbjct: 334 VSREESKSHQV 344


>gi|299139737|ref|ZP_07032910.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
 gi|298598361|gb|EFI54526.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
          Length = 743

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 11/109 (10%)

Query: 313 SSQIVFESDREGK--------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF- 363
           SS +  +  R+GK         QL+   ++G ++  ++ D     F   WSP G  +A  
Sbjct: 487 SSAVRVDYTRDGKWVAWTDSAGQLWRANASGEEKLLLTPDT-FDVFLAHWSPDGSRLALM 545

Query: 364 TKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            +  G+ + I ++  +G+    LL E  N   P+WSP G+SL+F R  D
Sbjct: 546 AREPGKAWQIYLVGANGNDLAPLLQESRNAADPSWSPDGQSLVFGRIND 594



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 13/108 (12%)

Query: 264 RFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--S 320
            +S +G R AL++ +  +A  IY V    N    L          S+SPD   +VF   +
Sbjct: 534 HWSPDGSRLALMAREPGKAWQIYLVGANGNDLAPLLQESRNAADPSWSPDGQSLVFGRIN 593

Query: 321 DREGKE------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           D  GKE       ++ +++N  +Q   S       F P WSP G  IA
Sbjct: 594 DAMGKENASRTLHIFHLKTNQMEQVPASD----GLFSPRWSPDGHYIA 637


>gi|332526849|ref|ZP_08402945.1| hypothetical protein RBXJA2T_13159 [Rubrivivax benzoatilyticus JA2]
 gi|332111294|gb|EGJ11278.1| hypothetical protein RBXJA2T_13159 [Rubrivivax benzoatilyticus JA2]
          Length = 662

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)

Query: 383 ERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           ERL  E   +   +W P  GR ++F+R + G+  ++LY +D   R  TL+  P    DP 
Sbjct: 95  ERLTAEPDPVAEASWEPREGRYIVFARGRGGNEATQLYRLDPATRQATLLTDPDQRHDP- 153

Query: 442 WVGFM 446
            +G++
Sbjct: 154 -IGWL 157


>gi|149277633|ref|ZP_01883774.1| putative Tricorn-like protease [Pedobacter sp. BAL39]
 gi|149231866|gb|EDM37244.1| putative Tricorn-like protease [Pedobacter sp. BAL39]
          Length = 1073

 Score = 42.0 bits (97), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 34/71 (47%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS +G   L +  ++   DI+   L+ N T  LTNT     S S+SPD   I F S R
Sbjct: 447 PSFSPDGAYVLFTAYRNFEQDIFVHHLKQNKTINLTNTGVTETSPSWSPDGKYIFFTSLR 506

Query: 323 EGKEQLYVMQS 333
                 + MQ+
Sbjct: 507 TKPSYPFGMQN 517



 Score = 36.6 bits (83), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 8/169 (4%)

Query: 206 LTPSRDQILFE--PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +T ++++  F   P  +P+ Q V ++   + D+ +V         A  R+       + P
Sbjct: 18  VTQAQNETYFTAYPALTPDAQTVVFSF--EGDLWKV----PATGGAATRLTAMPGEEINP 71

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R S +GK    S  +    D+Y + +     ++LT     +   ++S DS  I F S R 
Sbjct: 72  RVSPDGKWLAFSSNQFGNYDVYVMPMAGGTVKQLTFNDTADEVDNWSWDSKTIYFSSGRY 131

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                Y + +NG   KR+  +   +  +   +P G+L     +  + FA
Sbjct: 132 NMYTTYTVGANGGTAKRLFPNFFNTIHNVAEAPSGELFFNDTWESKNFA 180


>gi|37519745|ref|NP_923122.1| hypothetical protein glr0176 [Gloeobacter violaceus PCC 7421]
 gi|35210736|dbj|BAC88117.1| glr0176 [Gloeobacter violaceus PCC 7421]
          Length = 644

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 6/89 (6%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           ++ S SPD  ++V+ +   G+ QL+V   +G  Q    +    +     WSP GD IA++
Sbjct: 57  VNPSLSPDGGELVYRTGVSGQPQLWVNGPDGPRQITFGESVNIA----AWSPAGDGIAYS 112

Query: 365 KFSG--EKFAIGVMKKDGSQERLLVEDSN 391
              G  E+     +  DG +ER LV  ++
Sbjct: 113 VDRGGDEREGYYFISPDGKRERELVAPAD 141



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 10/139 (7%)

Query: 305 ISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +   +S D SQ+ + +   GK    +YV+ +  + Q R     +A  +   W P G  + 
Sbjct: 145 VWGGFSRDGSQVAYAATEPGKADFNVYVL-TVATGQTRRVLSGQAGIYPVAWRPDGKALV 203

Query: 363 FTKFSGEKFAIGVMKKD---GSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            ++  GE  A  ++  D   G    LL   E S      W+P G+    S  +D D  + 
Sbjct: 204 LSRVRGED-ANDLLYLDLTTGQASDLLAPPEASAYTQIAWTPDGKGFYLSTNQDRDFAAL 262

Query: 418 LYSIDLNGRNETLINTPAY 436
            Y  D   R    + TPA+
Sbjct: 263 AY-YDFAARKLRTVETPAH 280



 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 351 DPVWSPQG-DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           +P  SP G +L+  T  SG+   + V   DG ++    E  N+ A  WSP+G  + +S  
Sbjct: 58  NPSLSPDGGELVYRTGVSGQP-QLWVNGPDGPRQITFGESVNIAA--WSPAGDGIAYSVD 114

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPA 435
           + GD     Y I  +G+ E  +  PA
Sbjct: 115 RGGDEREGYYFISPDGKRERELVAPA 140


>gi|294139644|ref|YP_003555622.1| hypothetical protein SVI_0873 [Shewanella violacea DSS12]
 gi|293326113|dbj|BAJ00844.1| hypothetical protein [Shewanella violacea DSS12]
          Length = 394

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 81/172 (47%), Gaps = 20/172 (11%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           Q  E  +IY +D +SN    LTN +  +++  +SPD  ++ F    + K+ LY+M    +
Sbjct: 96  QTSEVFNIYHLDPKSNRITPLTNNMSQDVNPQFSPDGHKLAFIRFIDKKKVLYIMDLESN 155

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +  + + ++   F   W+   +++A     G+   +  +K DG  ++ L++        
Sbjct: 156 TELEVLRAEDI--FGYSWANTQEVLAIAIKQGDHSQLLSLKLDGLTKKPLLQTRR----- 208

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI-DLNG-RNETLINTPAYASDPQWVGFM 446
                     S  KD D  S + ++ +LN  R+++ I TP +++D   + F+
Sbjct: 209 ----------SADKD-DISSTVNNLSNLNSYRDQSEIMTPVWSTDDSQIAFI 249


>gi|315126189|ref|YP_004068192.1| peptidase [Pseudoalteromonas sp. SM9913]
 gi|315014703|gb|ADT68041.1| peptidase [Pseudoalteromonas sp. SM9913]
          Length = 647

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 67/173 (38%), Gaps = 29/173 (16%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           I+   FS  G + L+S  +     +Y VD+++ +  RLTN         Y P+  +++F 
Sbjct: 54  IMGSSFSPTGDKVLVSSDESGIYSLYEVDVKTGSKTRLTNFEDSTYPIRYFPNDERVLFT 113

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            D  G E   +YV + +GS +             P    +     FTK  G +F I   +
Sbjct: 114 KDSGGNERYHVYVREVDGSIKD----------LTPGEETRASFAGFTK-DGSQFFITSNQ 162

Query: 378 KDGSQERLLVEDS-------------NLQAPTWSPSGRSLIFSR---KKDGDT 414
           +D     L   DS              L     SP GR +  S+    KD DT
Sbjct: 163 RDAKFMDLYRVDSKTYKVTPVYQNTQGLDVGAISPDGRYIALSKNNTNKDSDT 215


>gi|307607782|emb|CBI44153.1| acylaminoacyl-peptidase fragment [Bacillus amyloliquefaciens DSM 7]
          Length = 148

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 10/120 (8%)

Query: 260 ILAPRFSSNGKRA-LISVQKDEAMDIYSVDLQSNATERLTNTLFI-----NISASYSPDS 313
           +  P+++ +G+RA  +  + ++  D YS  +    TE  T+  +      N S  +SPD 
Sbjct: 16  VTDPQYAPDGRRAAYVRTKVNDKRDSYSSAIMVYDTESGTSNPWTFGDNKNSSPRWSPDG 75

Query: 314 SQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEK 370
            ++ F SDRE G  QLY++ + G  +   + D      DP+W+P G   L++ +  S E+
Sbjct: 76  RRLAFVSDREDGVPQLYIIDAAGG-EAERAADIPWGVADPIWAPDGRSVLVSVSLTSAER 134


>gi|297181014|gb|ADI17215.1| periplasmic component of the tol biopolymer transport system
           [uncultured delta proteobacterium HF0070_10I02]
          Length = 1070

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 8/140 (5%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATYDD-EDILRVY 240
           V + + +N L  M  D   I  LT     +QI   P+FSP+ + VA + + D E  + +Y
Sbjct: 399 VTNKVQQNQLARMTID-QQIETLTELDGHEQIA-TPQFSPDGRYVAVSKWQDGERDIWIY 456

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +    R    +G   S    P +S++G+    S  +    ++Y+++L+S    ++TN 
Sbjct: 457 TAEGEPYRQIVSVG---SHDQDPTWSADGRWLYFSSDRTGIFNLYAIELESEKLFQITNV 513

Query: 301 LFINISASYSPDSSQIVFES 320
           L      +  PD+ +I FES
Sbjct: 514 LGGAFHPAPHPDAKRIAFES 533



 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 56/134 (41%), Gaps = 3/134 (2%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           I  P+FS +G+   +S  +D   DI+    +     ++ +    +   ++S D   + F 
Sbjct: 429 IATPQFSPDGRYVAVSKWQDGERDIWIYTAEGEPYRQIVSVGSHDQDPTWSADGRWLYFS 488

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMK 377
           SDR G   LY ++       +I+     + F P   P    IAF  FS  G       + 
Sbjct: 489 SDRTGIFNLYAIELESEKLFQITNVLGGA-FHPAPHPDAKRIAFESFSHNGMDIVEASLG 547

Query: 378 KDGSQERLLVEDSN 391
           +DG  E  LV  ++
Sbjct: 548 RDGWSEVGLVPSAD 561


>gi|153006586|ref|YP_001380911.1| hypothetical protein Anae109_3748 [Anaeromyxobacter sp. Fw109-5]
 gi|152030159|gb|ABS27927.1| conserved hypothetical protein [Anaeromyxobacter sp. Fw109-5]
          Length = 1012

 Score = 42.0 bits (97), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 64/149 (42%), Gaps = 4/149 (2%)

Query: 260 ILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           I  P FS +G + A   V  D   D+Y V ++    +RLTN  ++    ++  D      
Sbjct: 442 IADPAFSPDGSQIAFAGVSTDGQSDVYVVSVKGGEAKRLTNDFYVEKDVAWGADGIYCSS 501

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           ++   G+  L+ +  +   + R++         P     G ++  +  +G+     +  K
Sbjct: 502 DATDHGRMNLFRLDPSSGARTRLTTGPSTDR-GPFPQEDGSVLFSSDVAGKPDLYRL--K 558

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           DGS +R+    + L +P  SP GR +  S
Sbjct: 559 DGSIQRITDFTTGLTSPGPSPKGRGVFAS 587


>gi|317479118|ref|ZP_07938258.1| prolyl oligopeptidase [Bacteroides sp. 4_1_36]
 gi|316904690|gb|EFV26504.1| prolyl oligopeptidase [Bacteroides sp. 4_1_36]
          Length = 699

 Score = 42.0 bits (97), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 13/159 (8%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSS 314
           M  A   +S G       Q+D A  I   D++    +R+T      +    S + SPD  
Sbjct: 1   MSAAMTLASCGGTKDAGQQQDAATLIQRSDIKIEG-KRMTPEALWAMGRIGSVAVSPDEK 59

Query: 315 QIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           QI +          +   +++VM ++GSD  +I+ D       P W   G  +AF     
Sbjct: 60  QIAYTVSYYSVPQNKSNSEVFVMNADGSDNTQITHDAWQE-GQPTWFKDGKKLAFLCNES 118

Query: 369 EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
               +  M  DGS  + L + + +++  ++SP G+ L+F
Sbjct: 119 GSSQVWEMNPDGSGRKQLTQYEGDIEGFSFSPDGKKLLF 157


>gi|83815972|ref|YP_444562.1| hypothetical protein SRU_0417 [Salinibacter ruber DSM 13855]
 gi|83757366|gb|ABC45479.1| hypothetical protein SRU_0417 [Salinibacter ruber DSM 13855]
          Length = 982

 Score = 42.0 bits (97), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 10/126 (7%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKF 366
           +YSPD+S+I   +       +  +         +++  E +   PV W P G+ IAF++ 
Sbjct: 303 AYSPDTSRIAALTQHSPARPVRRLHVIDPSTGAVTRGAEGAIEPPVAWHPSGERIAFSRR 362

Query: 367 SGEKFAIGVMKKD-------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +  + A G +  D       G+ ER L       APT+ P G  L F   + G     L 
Sbjct: 363 T--RAAHGSLVDDVFVVDADGTDERRLTHGRRTSAPTFGPDGDRLAFVATEGGTANVHLR 420

Query: 420 SIDLNG 425
           ++   G
Sbjct: 421 ALKTGG 426



 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQ 393
           G+D++R++  +  S   P + P GD +AF    G    + +   K G   R+   + ++Q
Sbjct: 381 GTDERRLTHGRRTS--APTFGPDGDRLAFVATEGGTANVHLRALKTGGTTRVTDYEGDVQ 438

Query: 394 --APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
             A  W P+  +L F+R  + +    LY +D      T +  PA
Sbjct: 439 ITALRWHPTQDTLAFARVSEAERELVLYDLDTGA--STALTDPA 480


>gi|298528654|ref|ZP_07016058.1| peptidase S41 [Desulfonatronospira thiodismutans ASO3-1]
 gi|298512306|gb|EFI36208.1| peptidase S41 [Desulfonatronospira thiodismutans ASO3-1]
          Length = 1212

 Score = 42.0 bits (97), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 15/154 (9%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G R   S       D++   +Q     RLT     ++ +++SPD   +VF S R
Sbjct: 61  PSISPDGSRIAFS----SGGDLWLAGIQGGEARRLTRHRHDDLHSNWSPDGESLVFTSMR 116

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--------EKFAIG 374
           +G   L+ ++ +G+  ++++   +    +P WS   +       SG        E     
Sbjct: 117 DGYMNLWRIREDGTQVRQLTH-SDRFMRNPDWSMDEEGREVITLSGLLEADVYREHRPYR 175

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           +  + G  ERL    +    P  SP G   +F+R
Sbjct: 176 LPPEGGQHERL--HQAFGSEPRLSPCGSKTVFTR 207


>gi|237709872|ref|ZP_04540353.1| prolyl oligopeptidase [Bacteroides sp. 9_1_42FAA]
 gi|237725458|ref|ZP_04555939.1| prolyl oligopeptidase [Bacteroides sp. D4]
 gi|265753524|ref|ZP_06088879.1| prolyl oligopeptidase [Bacteroides sp. 3_1_33FAA]
 gi|229436145|gb|EEO46222.1| prolyl oligopeptidase [Bacteroides dorei 5_1_36/D4]
 gi|229455965|gb|EEO61686.1| prolyl oligopeptidase [Bacteroides sp. 9_1_42FAA]
 gi|263235238|gb|EEZ20762.1| prolyl oligopeptidase [Bacteroides sp. 3_1_33FAA]
          Length = 706

 Score = 42.0 bits (97), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 10/146 (6%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S S SPD  +I +       S+ +    +YVM ++G +   ++Q    +  +P W   G 
Sbjct: 58  SLSISPDGKKIAYTVAYYSVSENKSHHVIYVMNTDGKNNTLLTQ-TAWNESEPQWIKGGT 116

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF-SRKKDGDTGSK 417
            IAF         I  M  DG++ R++ +   +++  ++SP G+ ++F S+ K G     
Sbjct: 117 KIAFLCNESGGSQIWEMNPDGTERRIISDFKGDIEGFSFSPDGKKILFISQIKYGQRTVD 176

Query: 418 LYSIDLNGRNETLINTPAYASDPQWV 443
           LY  DL   +  ++N   Y    +WV
Sbjct: 177 LYP-DLPKASGIIVNDLMYKHWDEWV 201


>gi|281419894|ref|ZP_06250893.1| MdsD protein [Prevotella copri DSM 18205]
 gi|281406021|gb|EFB36701.1| MdsD protein [Prevotella copri DSM 18205]
          Length = 1077

 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 34/62 (54%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+YSV +      +LT     +    +SPDS +I F+S+REG   ++V+ + G    R++
Sbjct: 45  DLYSVSVNGGEARQLTTHAAFDSHPVWSPDSKKIAFQSNREGSLDIFVIDAKGGAPTRLT 104

Query: 343 QD 344
            +
Sbjct: 105 TN 106



 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 33/124 (26%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y   ++   T+R+T+T       S+SPD   +V+ ++R G  Q+Y        Q +I 
Sbjct: 332 DVYVTSVEYTTTKRITDTPQQERDLSFSPDGRALVYAAERNGVWQIY--------QSKIK 383

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            +KE ++                             D  +E+L+      Q P +SP G+
Sbjct: 384 NEKEKNF-------------------------TYATDIEEEQLVKTGITSQYPQYSPDGK 418

Query: 403 SLIF 406
            + F
Sbjct: 419 EVAF 422



 Score = 37.0 bits (84), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 9/97 (9%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKK 410
           P  SP G  IAF  + G+ +++ V   +G + R L   +   + P WSP  + + F   +
Sbjct: 29  PAISPDGTTIAFA-YKGDLYSVSV---NGGEARQLTTHAAFDSHPVWSPDSKKIAFQSNR 84

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           +G     ++ ID  G   T + T + +  P  + F D
Sbjct: 85  EGSL--DIFVIDAKGGAPTRLTTNSGSETP--IAFAD 117


>gi|327310653|ref|YP_004337550.1| tricorn protease [Thermoproteus uzoniensis 768-20]
 gi|326947132|gb|AEA12238.1| tricorn protease [Thermoproteus uzoniensis 768-20]
          Length = 1025

 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/93 (35%), Positives = 43/93 (46%), Gaps = 7/93 (7%)

Query: 352 PVWSPQGDLIAFTKFS----GEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
           P +SP G  IAFT+      G      V+  DG Q + L        +   W+P GR L+
Sbjct: 44  PKFSPDGRYIAFTRLQQTDQGTLAEAYVVPADGGQPKRLTYFGSPYTRVAGWTPDGRVLV 103

Query: 406 FSR-KKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           FS  K       +LYS+ L+GR E L   PA A
Sbjct: 104 FSDFKMPFPQWRELYSVSLDGRYERLNLGPATA 136


>gi|294506310|ref|YP_003570368.1| hypothetical protein SRM_00495 [Salinibacter ruber M8]
 gi|294342638|emb|CBH23416.1| conserved hypothetical protein [Salinibacter ruber M8]
          Length = 992

 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 10/126 (7%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKF 366
           +YSPD+S+I   +       +  +         +++  E +   PV W P G+ IAF++ 
Sbjct: 313 AYSPDTSRIAALTQHSPARPVRRLHVIDPSTGAVTRGAEGAIEPPVAWHPSGERIAFSRR 372

Query: 367 SGEKFAIGVMKKD-------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +  + A G +  D       G+ ER L       APT+ P G  L F   + G     L 
Sbjct: 373 T--RAAHGSLVDDVFVVDADGTDERRLTHGRRTSAPTFGPDGDRLAFVATEGGTANVHLR 430

Query: 420 SIDLNG 425
           ++   G
Sbjct: 431 ALKTGG 436



 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQ 393
           G+D++R++  +  S   P + P GD +AF    G    + +   K G   R+   + ++Q
Sbjct: 391 GTDERRLTHGRRTS--APTFGPDGDRLAFVATEGGTANVHLRALKTGGTTRVTDYEGDVQ 448

Query: 394 --APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
             A  W P+  +L F+R  + +    LY +D      T +  PA
Sbjct: 449 ITALRWHPTQDTLAFARVSEAERELVLYDLDTGA--STALTDPA 490


>gi|168699314|ref|ZP_02731591.1| peptidase S9, prolyl oligopeptidase active site region [Gemmata
           obscuriglobus UQM 2246]
          Length = 706

 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 29/200 (14%)

Query: 247 DRAPKRIGNFRSM--ILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFI 303
           D+ P ++ +  +   + +P+ S +GK  +  V   D   +  S  L   AT+  T    I
Sbjct: 23  DKRPMKVQDLFAFKRVASPQISPDGKAVVYQVTTVDLGANKSSTALWLAATDGKTEPKQI 82

Query: 304 -------NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                  +++  +SPD ++++FES R G  QL+V+      +   S    AS  +  W+P
Sbjct: 83  TDPKGKKDMNPRWSPDGTRVLFESTRSGTPQLWVLTVGEEPKPVTSISTGAS--NGTWAP 140

Query: 357 QGDLIAFT-----KFSGEKFAIG-VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            G  +AF      +FS + F     + K+  +E   +E S ++A T+     + +F R  
Sbjct: 141 DGKSVAFVSTVYPEFSEKPFPESDKLNKEKDEE---IEKSPVKAKTF-----TKLFYRHW 192

Query: 411 D---GDTGSKLYSIDLNGRN 427
           D   GD    L+  +L+G +
Sbjct: 193 DDYVGDKRQHLFVCNLDGTD 212


>gi|85710926|ref|ZP_01041987.1| putative exported peptidase [Idiomarina baltica OS145]
 gi|85695330|gb|EAQ33267.1| putative exported peptidase [Idiomarina baltica OS145]
          Length = 1068

 Score = 42.0 bits (97), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           R +I+ P  S +G +   S Q D    I+++        RLT       S  +S D   I
Sbjct: 25  RPLIMQPEISPDGTQIAFSYQGD----IWTMSTSGTHPNRLTIHEGYESSPKWSKDGKTI 80

Query: 317 VFESDREGKEQLYVMQSNGSDQKRIS 342
            F SDR G + ++VM S G    R++
Sbjct: 81  AFSSDRFGNDDVFVMPSQGGRPDRLT 106



 Score = 37.0 bits (84), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 27/237 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           SL V    GA+     P R  ++ +P  SP+  ++A++   D     ++ M T     P 
Sbjct: 7   SLLVSAAFGASASNGAPER-PLIMQPEISPDGTQIAFSYQGD-----IWTMSTS-GTHPN 59

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+        +P++S +GK    S  +    D++ +  Q    +RLT     +    +  
Sbjct: 60  RLTIHEGYESSPKWSKDGKTIAFSSDRFGNDDVFVMPSQGGRPDRLTYHSAPDRVLGFGH 119

Query: 312 DSSQIVFESDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--- 363
           D +Q++F + R     E + ++Y +  +G   +    D  A  FD V SP G  IAF   
Sbjct: 120 D-NQVLFNTRRLYAEVEREWEVYGVAPSGDATEARFMD--ALGFDAVVSPDGKKIAFVRG 176

Query: 364 -TKFSGEKFAIGVMK-------KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             + S E +     +       + G  E+L   D N   P WS S   L F   + G
Sbjct: 177 TCRISREDYRGPANRNIWIYDTETGEYEQLTDFDGNDFMPQWS-SNNELYFISSRAG 232


>gi|212693127|ref|ZP_03301255.1| hypothetical protein BACDOR_02634 [Bacteroides dorei DSM 17855]
 gi|212664232|gb|EEB24804.1| hypothetical protein BACDOR_02634 [Bacteroides dorei DSM 17855]
          Length = 706

 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 10/146 (6%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S S SPD  +I +       S+ +    +YVM ++G +   ++Q    +  +P W   G 
Sbjct: 58  SLSISPDGKKIAYTVAYYSVSENKSHHVIYVMNTDGKNNTLLTQ-TAWNESEPQWIKGGT 116

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF-SRKKDGDTGSK 417
            IAF         I  M  DG++ R++ +   +++  ++SP G+ ++F S+ K G     
Sbjct: 117 KIAFLCNESGGSQIWEMNPDGTERRIISDFKGDIEGFSFSPDGKKILFISQIKYGQRTVD 176

Query: 418 LYSIDLNGRNETLINTPAYASDPQWV 443
           LY  DL   +  ++N   Y    +WV
Sbjct: 177 LYP-DLPKASGIIVNDLMYKHWDEWV 201


>gi|329961445|ref|ZP_08299550.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           fluxus YIT 12057]
 gi|328531793|gb|EGF58619.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           fluxus YIT 12057]
          Length = 715

 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 8/104 (7%)

Query: 310 SPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD  QI +       S  +   +++VM ++GS   +I++D       P W   G  IAF
Sbjct: 62  SPDEKQIAYSVAYYSVSQNKSNNEIFVMNADGSGNTQITRDAWQES-QPTWFKDGKKIAF 120

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
                    +  M  DGS  + L   D +++  ++SP G+ L+F
Sbjct: 121 LCNESGSSQVWEMNPDGSDRKQLTRYDGDIEGFSFSPDGKKLLF 164


>gi|315499889|ref|YP_004088692.1| wd40-like beta propeller containing protein [Asticcacaulis
           excentricus CB 48]
 gi|315417901|gb|ADU14541.1| WD40-like beta Propeller containing protein [Asticcacaulis
           excentricus CB 48]
          Length = 275

 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 14/113 (12%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +S D   I F S+R G+ QL+ ++ +G + +R+S    A +F P  SP    + +  +  
Sbjct: 162 FSTDGEWIWFNSNRSGQMQLWRIRRDGRELQRMSDSPYADWF-PHPSPDDRHVLWLSYDS 220

Query: 369 ---------EKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
                    +   + +M  +G +   L E       +  P W+P G+S  F R
Sbjct: 221 SVGRDHPRDQTVRLRLMPAEGGEAETLFELFGGQGTMNVPNWAPDGQSFAFVR 273


>gi|56964382|ref|YP_176113.1| acylamino-acid-releasing enzyme [Bacillus clausii KSM-K16]
 gi|56910625|dbj|BAD65152.1| acylamino-acid-releasing enzyme [Bacillus clausii KSM-K16]
          Length = 648

 Score = 42.0 bits (97), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 14/118 (11%)

Query: 258 SMILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFIN---ISAS 308
           + + +P  + +GK A I V K      D   +IY +D+Q ++   ++   F N   IS  
Sbjct: 14  TTVTSPAVAPDGKSAAIVVTKMDKQKNDYIANIYGLDMQKSS--HVSQWTFGNDKHISPK 71

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +S  +  + + S+R GK Q+YV Q     ++    +   + F   WSP G  IAF  +
Sbjct: 72  WS-STGALAYLSNRTGKMQVYVKQGMAEAEQLTDLENGVNAF--FWSPDGSKIAFAAY 126



 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 11/98 (11%)

Query: 265 FSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-V 317
           FS+NG+  L++   +E      A+D++ +DL + A  ++T    +  S S SPD S + +
Sbjct: 189 FSANGRAVLVAGSHNENNDFTFAVDVWFIDLDTGAKTQITKEPMVVQSGSVSPDGSYVAL 248

Query: 318 FESDREGKE----QLYVMQSNGSDQKRISQDKEASYFD 351
              +RE K     +LYV      + + +S   +AS  D
Sbjct: 249 LGHEREYKNATLTKLYVYDCQKQEIRLLSSQLDASIGD 286


>gi|300787956|ref|YP_003768247.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Amycolatopsis
           mediterranei U32]
 gi|299797470|gb|ADJ47845.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Amycolatopsis
           mediterranei U32]
          Length = 648

 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 62/154 (40%), Gaps = 26/154 (16%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN------- 304
           R  +  ++++  R +  G   L +V++         DL++NAT      + ++       
Sbjct: 2   RPADIEALVVPGRPALRGNLLLTAVKRP--------DLRANATHSAVRRVSLDGGEAAWT 53

Query: 305 -----ISASYSPDSSQIVFESDREGK-----EQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                 + + SPD   + F    EG+      QL+VM S+G + +R++        +PVW
Sbjct: 54  HGPRDSAPAISPDGRWVAFLRAGEGQGADGSPQLHVMPSDGGEARRLTS-LHLGAGEPVW 112

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +P    IAFT    E    G    DG       E
Sbjct: 113 APDSRRIAFTARVPEAGRYGTPDADGETPEPAAE 146


>gi|166713322|ref|ZP_02244529.1| hypothetical protein Xoryp_18265 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 785

 Score = 42.0 bits (97), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 6/127 (4%)

Query: 305 ISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDL 360
           +S S+SPD+  ++F S     G  ++  +       + ++    A  FD  P +SP G  
Sbjct: 330 LSFSWSPDARALLFGSMTGSYGAARIRRLNLETGQWQTLNYPAHAGDFDYAPRYSPDGHW 389

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           I F +         +  + G+ ERL  +  ++   +W P G  +IF R+ D +  ++LY 
Sbjct: 390 IVFLRNPQLGDLWRIPAEGGAAERLTHDTGDIWGWSWLPDGSGVIFGRRVDIE--ARLYR 447

Query: 421 IDLNGRN 427
           +DL  R+
Sbjct: 448 LDLLDRS 454



 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 15/148 (10%)

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQG 358
           +++ S SPD + + + S   DR G   L  ++S  +   R+ +       D  P WSP G
Sbjct: 232 DLTPSLSPDGAMVAYASLTSDRTGTSIL--VKSTDNAYPRVLETPAPGVSDRLPAWSPDG 289

Query: 359 DLIAFTKFSGEKFAIGVM-------KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             IAF++ + +  +  VM           ++E    + +++ + +WSP  R+L+F     
Sbjct: 290 REIAFSRQAPDG-SCRVMIAAAAATTPAAAREVARCDGADMLSFSWSPDARALLFGSMTG 348

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASD 439
               +++  ++L       +N PA+A D
Sbjct: 349 SYGAARIRRLNLETGQWQTLNYPAHAGD 376


>gi|145590728|ref|YP_001152730.1| peptidase S41 [Pyrobaculum arsenaticum DSM 13514]
 gi|145282496|gb|ABP50078.1| peptidase S41 [Pyrobaculum arsenaticum DSM 13514]
          Length = 1016

 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 37/182 (20%)

Query: 276 VQKDEAMDIYSVDL---QSNATERLTNTLFINISASYSPDSSQIVF----ESDREGKEQL 328
           +  DE + +   DL   +  A +RLT+   + I   +SPD   I F    ++D+     +
Sbjct: 10  IHGDEIVFVTEDDLWRYRGGAGQRLTSDFGVVIRPKFSPDGKWIAFTRLQQTDQGTTSDV 69

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQ 382
           YV+ + G + +R++           W+P G ++A++ +        E +AI +   DG+ 
Sbjct: 70  YVIPAEGGEPRRLTYFGTPFTRVVGWTPDGRVLAYSDYKTPFPQWRELYAIAL---DGTY 126

Query: 383 ERL----------------LVEDSNLQAPTWS---PSGRSLIFSRKKDGDTGSKLYSIDL 423
           ERL                ++  +N + P W       R +++  +  G T +K   +DL
Sbjct: 127 ERLNLGPATALVYGDGGVVVLGRNNYELPHWKRYRGGARGVLWISRDGGKTFAKF--LDL 184

Query: 424 NG 425
            G
Sbjct: 185 PG 186


>gi|45934815|gb|AAS79479.1| hypothetical protein [Streptomyces bikiniensis]
          Length = 1066

 Score = 41.6 bits (96), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 62/169 (36%), Gaps = 34/169 (20%)

Query: 263 PRFSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           PR + +G   L            D++ V        RLT+T       + SPD ++I + 
Sbjct: 127 PRLTPDGGSVLFDAADPAGGSQRDLWLVRTDGTGLTRLTDTPASEEDPAVSPDGARIAYS 186

Query: 320 SDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-----LIAFTKFSGEKFA 372
           SD +     Q+YV    G    R++     +  +P W+P  D      IA+T  + E   
Sbjct: 187 SDADPLAGRQIYVRALTGGIPTRLTDPARGTASEPAWNPVDDDVNRAWIAYTSTTTE--- 243

Query: 373 IGVMKKDG-SQERLLVEDSNL--------------QAPTWSPSGRSLIF 406
                 DG +++RL + D                     W P G  ++F
Sbjct: 244 ------DGRTRQRLRITDGTTDETLFTGAYANWQGHGAAWLPDGDGIVF 286



 Score = 40.4 bits (93), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 30/136 (22%)

Query: 308 SYSPDSSQIV---FESDREGK-EQLYVMQSNGSDQKRISQDKEASY---FDPVWSPQGDL 360
           +Y+PD  ++V   FE   + + E+++   ++G+++  +  D   +     DP +SP G  
Sbjct: 402 NYTPDGRRLVLTRFEGPDDARIERIWTADADGTNEAPMPLDGRGARDWDTDPTFSPDGTR 461

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-----------------APTWSPSGRS 403
           +AFT+ S      GV +  G    LL E +  +                  PTWS  G +
Sbjct: 462 LAFTRTS----PGGVGEAAGDSRILLAEVATGRITGEIVPPAGELRGGDAQPTWSSDGTT 517

Query: 404 LIFSRKKD--GDTGSK 417
           L F+R +   G  GSK
Sbjct: 518 LAFTRARQIAGGGGSK 533


>gi|119470806|ref|ZP_01613417.1| N-terminal winged-HTH domain fused to TolB-like domain
           [Alteromonadales bacterium TW-7]
 gi|119446033|gb|EAW27312.1| N-terminal winged-HTH domain fused to TolB-like domain
           [Alteromonadales bacterium TW-7]
          Length = 622

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 47/105 (44%), Gaps = 1/105 (0%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           N   +I    FS +G   L+ + K +     S        E L +T  I+    YSPDSS
Sbjct: 331 NNYHIIRDAHFSLSGNDILMELVKIDVDITRSTRQAPTQFETLVDTSSIDFLPVYSPDSS 390

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           + VFES R G +QL++ + N +     S       F  VWS  G+
Sbjct: 391 KFVFESHRFGTKQLFLYE-NSTQTLIFSNPDNEELFGIVWSKNGE 434


>gi|332525793|ref|ZP_08401936.1| peptidase S9 prolyl oligopeptidase [Rubrivivax benzoatilyticus JA2]
 gi|332109346|gb|EGJ10269.1| peptidase S9 prolyl oligopeptidase [Rubrivivax benzoatilyticus JA2]
          Length = 679

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 54/116 (46%), Gaps = 18/116 (15%)

Query: 306 SASYSPDSSQIVFESDREGKE------QLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQ 357
           + S SPD +Q V    R   E       L++  + G   + ++   DK+     P WSP+
Sbjct: 19  APSLSPDGAQAVAAVTRYSMEDNKSASSLWLFSTLGGAARALTACGDKDGQ---PRWSPK 75

Query: 358 GDLIAFT---KFSGEK---FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
           GDL+AF    +  GEK     + V+  DG + R      + ++A  W P GR L+F
Sbjct: 76  GDLVAFVARREQQGEKDETAQLYVIAPDGGEARRAATVATGIEAFRWCPDGRRLLF 131



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 16/136 (11%)

Query: 310 SPDSSQIVFESDREGKEQL---YVMQSNGSDQKRIS---QDKEASYFDPVWSPQGDLIAF 363
           SPD  ++VF  D   ++++   + +        R+S   QD +     P +SP+G+ IAF
Sbjct: 220 SPDGKRVVFAFDPAPEKRIDNRFALAELELKSGRVSVIVQDADWDCSAPRYSPEGERIAF 279

Query: 364 -TKFSGEKFA----IGVMKKDGSQERLLVE--DSNLQAP-TWSPSGRSLIFSRKKDGDTG 415
                G K      + V  +D S+  +L E  D ++QAP  W   G++L+   ++ G   
Sbjct: 280 IASHQGRKHTMPGQVAVWYRDESRWEVLSEAWDHDVQAPLAWEDDGQALLLRAEQRGR-- 337

Query: 416 SKLYSIDLNGRNETLI 431
             L+  DL  R   L+
Sbjct: 338 QHLWRFDLPDRRAELV 353


>gi|115473615|ref|NP_001060406.1| Os07g0638100 [Oryza sativa Japonica Group]
 gi|27261082|dbj|BAC45195.1| unknown protein [Oryza sativa Japonica Group]
 gi|113611942|dbj|BAF22320.1| Os07g0638100 [Oryza sativa Japonica Group]
          Length = 659

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 12/89 (13%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSN-----GSDQKRISQDKEASYFD--PVWSPQGDL 360
           + SP    +VF S R G + LY++ +      G+ +  I +  +  + D  P WSP G L
Sbjct: 453 AVSPCGKWVVFRSGRSGHKNLYIVDAAHGEDVGAGEGTIRRLTDGEWIDTMPSWSPDGSL 512

Query: 361 IAFT-----KFSGEKFAIGVMKKDGSQER 384
           IAF+       +   F+I +++ DGS  R
Sbjct: 513 IAFSSNRHDPTNAAVFSIYLVRPDGSGLR 541


>gi|291302348|ref|YP_003513626.1| peptidase S41 [Stackebrandtia nassauensis DSM 44728]
 gi|290571568|gb|ADD44533.1| peptidase S41 [Stackebrandtia nassauensis DSM 44728]
          Length = 1089

 Score = 41.6 bits (96), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 3/102 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           PRF +     ++ V +D   D++SV        RLT  +        SPD S I +    
Sbjct: 6   PRFPAIHNDTIVFVAED---DLWSVTTAGGTARRLTAGVAAASFPRISPDGSLIAYTGAE 62

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           EG   ++V+ + G + +R++ +         W P G+ + + 
Sbjct: 63  EGPPDVHVVPTEGGETRRLTYEGGRISRVAGWDPTGEFVIYA 104


>gi|125559315|gb|EAZ04851.1| hypothetical protein OsI_27029 [Oryza sativa Indica Group]
          Length = 659

 Score = 41.6 bits (96), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 12/89 (13%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSN-----GSDQKRISQDKEASYFD--PVWSPQGDL 360
           + SP    +VF S R G + LY++ +      G+ +  I +  +  + D  P WSP G L
Sbjct: 453 AVSPCGKWVVFRSGRSGHKNLYIVDAAHGEDVGAGEGTIRRLTDGEWIDTMPSWSPDGSL 512

Query: 361 IAFT-----KFSGEKFAIGVMKKDGSQER 384
           IAF+       +   F+I +++ DGS  R
Sbjct: 513 IAFSSNRHDPTNAAVFSIYLVRPDGSGLR 541


>gi|256394899|ref|YP_003116463.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Catenulispora acidiphila DSM 44928]
 gi|256361125|gb|ACU74622.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Catenulispora acidiphila DSM 44928]
          Length = 635

 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 57/263 (21%), Positives = 100/263 (38%), Gaps = 35/263 (13%)

Query: 193 LCVMDRDGANIRYLTPSRDQI-----LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
           L + + DG+    L PS + +     +FEP  SP+  +VA+       +    +  +R  
Sbjct: 50  LVITNPDGSGTHLLHPSGNGLSATSQIFEPAVSPDGSRVAFGDVASRAVWVAGVDGSR-- 107

Query: 248 RAPKRIGNFRSMIL--APRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLF 302
             P RI +     +   P +S +G     + +   A  + +    D    A    T T  
Sbjct: 108 --PVRISSPTGSAVDSEPTWSPDGTSVFFTRRAGTAQIMKASADGDHDEAAVFFPTGTND 165

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S + + D   + FE +  G   ++V+ +        +         P WSP G  +A
Sbjct: 166 TEPSVAVNGD---LAFERNVNGTSTIFVLAAGAGSATPFANGAR-----PAWSPDGSRLA 217

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + + S       ++K    QE  L+  S +QA  P W+  G  + F     G    +++ 
Sbjct: 218 YDRGSAL-----LVKTRAGQES-LIGTSGVQASRPAWAADGAHIAFEGSVPGHH-RQIWV 270

Query: 421 IDLNGRNETLINTPAYASDPQWV 443
           +D      TL  +P  A  P  V
Sbjct: 271 VD----TSTLTVSPVGAEPPDGV 289


>gi|157164610|ref|YP_001466350.1| translocation protein TolB [Campylobacter concisus 13826]
 gi|112800116|gb|EAT97460.1| protein TolB [Campylobacter concisus 13826]
          Length = 418

 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/158 (21%), Positives = 76/158 (48%), Gaps = 5/158 (3%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           M++A   S +G + L+++   +  DI+  +  S    ++TN   I+++ ++  + S+IVF
Sbjct: 237 MLIASDVSKDGSKILLTMAPKDQPDIFIYNTGSKNLTQITNYPGIDVNGNFVDNDSRIVF 296

Query: 319 ESDREGKEQLYVM--QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            SDR G   ++     S GS ++ +   K     + V + +  ++  ++ +   F I ++
Sbjct: 297 VSDRLGYPNIFATPATSGGSVEQMVFHGKNN---NSVSTFENYVVYSSREASGGFNIYLI 353

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                  R L  +     P +S  G+S++F ++  G +
Sbjct: 354 STQTDFIRQLTANGKNNYPRFSSDGQSVVFIKELGGQS 391


>gi|108760758|ref|YP_633450.1| S9C family peptidase [Myxococcus xanthus DK 1622]
 gi|108464638|gb|ABF89823.1| peptidase, S9C (acylaminoacyl-peptidase) subfamily [Myxococcus
           xanthus DK 1622]
          Length = 711

 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVF 318
           +L   FSS+ KR L S  +    +++SV +      +LT +T   +I+ +Y P   +++F
Sbjct: 123 VLGASFSSDEKRVLYSSNETGVFNVFSVPVTGGKPTQLTRSTQDASIAVAYFPTDDRVLF 182

Query: 319 ESDREGKE--QLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEK 370
             D  G E   LYV   +G ++     D+  AS+F   WS  G   AF   + E+
Sbjct: 183 TRDSGGNELVHLYVRTLDGQEKDLTPGDEHRASFFG--WSQDG--AAFYVLTNER 233


>gi|308069072|ref|YP_003870677.1| peptidase yuxL [Paenibacillus polymyxa E681]
 gi|305858351|gb|ADM70139.1| Probable peptidase yuxL [Paenibacillus polymyxa E681]
          Length = 675

 Score = 41.6 bits (96), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 14/134 (10%)

Query: 288 DLQSNATERLTNT-----LFINISASYSPDSSQIVFESDREGKEQ------LYVMQSNGS 336
           D QS+ T+R         L+     +  P S +I +      KE+      ++++ S G+
Sbjct: 3   DSQSSTTKRCVTAEDLYRLYWVSDPAIHPISGEIAYVEQHINKERTDYNSGIWLLSSEGA 62

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAP 395
                +   +     PVWSP G  +AF + +  K  + ++ + G + R L   ++N+++ 
Sbjct: 63  SALPFTYGPKDE--TPVWSPDGSQLAFLRTTDGKRQVWIIPERGGEARQLTHVENNVRSL 120

Query: 396 TWSPSGRSLIFSRK 409
            WSP G  + F  K
Sbjct: 121 AWSPEGTCISFVAK 134



 Score = 40.0 bits (92), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 39/136 (28%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD SQ+ F    +GK Q++++   G + ++++   E +     WSP+G  I+F   + 
Sbjct: 78  WSPDGSQLAFLRTTDGKRQVWIIPERGGEARQLTH-VENNVRSLAWSPEGTCISFVAKTA 136

Query: 369 EKFAIGV-------------------MKKDG------SQERLLVED-------------S 390
           E  +                       K DG      +++ L V D              
Sbjct: 137 ENPSSPTSDGGTQEAQLKGRVVNRTKAKSDGYGLWDDTRDHLYVTDVTSGHTIQQTSGAY 196

Query: 391 NLQAPTWSPSGRSLIF 406
           ++  P WSP GR ++F
Sbjct: 197 DVAEPVWSPDGRRILF 212


>gi|303235446|ref|ZP_07322060.1| dipeptidyl peptidase IV N-terminal domain protein [Prevotella
           disiens FB035-09AN]
 gi|302484361|gb|EFL47342.1| dipeptidyl peptidase IV N-terminal domain protein [Prevotella
           disiens FB035-09AN]
          Length = 1087

 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 31/62 (50%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI+SV +      +LT     +    +SPD   I F S REG   +Y+M  +G   KR++
Sbjct: 45  DIFSVPVNGGIARQLTTNPAYDAYPVWSPDGQNIAFSSSREGSLDIYLMSKDGGTPKRLT 104

Query: 343 QD 344
            +
Sbjct: 105 TN 106



 Score = 40.0 bits (92), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 6/107 (5%)

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           L++  SA  SPD   I F      K  ++ +  NG   ++++ +     + PVWSP G  
Sbjct: 24  LWLRYSA-ISPDGKTIAFSY----KGDIFSVPVNGGIARQLTTNPAYDAY-PVWSPDGQN 77

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           IAF+        I +M KDG   + L  +S  + P        ++F+
Sbjct: 78  IAFSSSREGSLDIYLMSKDGGTPKRLTTNSGSETPMAFKDNNHILFT 124



 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 33/124 (26%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y   L    T+++TNT     +  ++PD   IV+ S+R G  Q+Y        + +I 
Sbjct: 332 DVYVTSLDYKTTKQVTNTAEQERNIDFAPDGRGIVYSSERNGIWQIY--------ETKIK 383

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
              E ++     +   DL+                    +ERL   D   Q P +SP G+
Sbjct: 384 NKAEKNF-----TYSTDLV--------------------EERLTNTDQTSQMPQYSPDGK 418

Query: 403 SLIF 406
            + F
Sbjct: 419 KVAF 422



 Score = 37.0 bits (84), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 11/78 (14%)

Query: 352 PVW------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSL 404
           P+W      SP G  IAF+ + G+ F++ V   +G   R L  +    A P WSP G+++
Sbjct: 23  PLWLRYSAISPDGKTIAFS-YKGDIFSVPV---NGGIARQLTTNPAYDAYPVWSPDGQNI 78

Query: 405 IFSRKKDGDTGSKLYSID 422
            FS  ++G     L S D
Sbjct: 79  AFSSSREGSLDIYLMSKD 96


>gi|300709435|ref|YP_003735249.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halalkalicoccus jeotgali B3]
 gi|299123118|gb|ADJ13457.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halalkalicoccus jeotgali B3]
          Length = 666

 Score = 41.6 bits (96), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 8/112 (7%)

Query: 263 PRFSSNGKR-ALISVQKDEAMD----IYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           P+ S +G+R A +     +A +    I+   L    + R T T  I+    +SP    + 
Sbjct: 18  PQLSPDGERVAFVRTTPRDAEESEATIHIASLGGEGSRRFTLTAGIDSEPRWSPSGDHLS 77

Query: 318 FESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           F S R  + + QL+V  ++G + +RI++       +  W P G+ IAF + S
Sbjct: 78  FVSTRGDDDRPQLWVAPADGGEARRITEGV-GGVSNIAWRPDGEGIAFVQSS 128


>gi|262196481|ref|YP_003267690.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262079828|gb|ACY15797.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1398

 Score = 41.2 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 23/268 (8%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +VS     ++ V   DG +   +    D+ +F   FSP+   +  A+ D    +RV+  D
Sbjct: 1076 IVSASEDKTVRVWRADGQSEPLILSGHDEPVFSTSFSPDGAHIVSASED--KTVRVWRAD 1133

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +  P  +      + +  FS +G   ++S   D+ + ++  D Q        +   +
Sbjct: 1134 GTGE--PLILRGHDDEVRSASFSPDGAH-IVSASWDKTVRVWRADGQGQPLILRGHDDGV 1190

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              S S+SPD + IV  S     + + V +++G  Q  I +  + +     +SP G  I  
Sbjct: 1191 T-STSFSPDGAHIVSAS---WDKTVRVWRADGQGQPLILRGHDKAVISASFSPDGAHIVS 1246

Query: 364  TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                     + V   DGS E L++   D  +    +SP GR ++ + K   D   +++  
Sbjct: 1247 AALDN---TVRVWNADGSGEPLILRGHDDWVSWAEFSPDGRFIVSASK---DKTIRIWRA 1300

Query: 422  DLNGR------NETLINTPAYASDPQWV 443
            D  G       +E   NT  ++ D Q V
Sbjct: 1301 DGMGEPVILRGHEQWPNTARFSPDGQRV 1328



 Score = 39.3 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 10/161 (6%)

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            D AP         + +  FS +G   L+S   D+ + ++  D  +     L       IS
Sbjct: 967  DVAPVVFTEHDEAVYSASFSPDGAH-LVSTSADKTVRVWRAD-GTGEPLILRGHDEAVIS 1024

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            AS+SPD + IV  S     + + V +++G  Q  I +  + + +   +SP G   A    
Sbjct: 1025 ASFSPDGAHIVSAS---ADKTVRVWRADGQGQPLILRGHDEAVYSASFSPDG---AHIVS 1078

Query: 367  SGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
            + E   + V + DG  E L++   D  + + ++SP G  ++
Sbjct: 1079 ASEDKTVRVWRADGQSEPLILSGHDEPVFSTSFSPDGAHIV 1119



 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 48/231 (20%), Positives = 97/231 (41%), Gaps = 28/231 (12%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +VS     ++ V   DG     +    D+ ++   FSP+   +  A+ D    +RV+  D
Sbjct: 1034 IVSASADKTVRVWRADGQGQPLILRGHDEAVYSASFSPDGAHIVSASED--KTVRVWRAD 1091

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-------LQSNATER 296
             + +  P  +      + +  FS +G   ++S  +D+ + ++  D       L+ +  E 
Sbjct: 1092 GQSE--PLILSGHDEPVFSTSFSPDGAH-IVSASEDKTVRVWRADGTGEPLILRGHDDEV 1148

Query: 297  LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                     SAS+SPD + IV  S     + + V +++G  Q  I +  +       +SP
Sbjct: 1149 R--------SASFSPDGAHIVSAS---WDKTVRVWRADGQGQPLILRGHDDGVTSTSFSP 1197

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
             G  I    +      + V + DG  + L++   D  + + ++SP G  ++
Sbjct: 1198 DGAHIVSASWDK---TVRVWRADGQGQPLILRGHDKAVISASFSPDGAHIV 1245


>gi|88704759|ref|ZP_01102472.1| peptidase yuxL [Congregibacter litoralis KT71]
 gi|88701080|gb|EAQ98186.1| peptidase yuxL [Congregibacter litoralis KT71]
          Length = 665

 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 60/294 (20%), Positives = 109/294 (37%), Gaps = 62/294 (21%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  + +M  +G     +T S D     PR+SP+ + +++     E+         R+   
Sbjct: 64  RTRIWMMSTEGGEPIPMT-SPDSSASRPRWSPDNKYLSFTASRGENARTQVWSLNRLGGE 122

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI------------YSVDLQS------ 291
             ++ N +  +    +S +G R L++++     D+            Y +D         
Sbjct: 123 AMQVTNVKQGVSDFAWSPDGTRLLLTIKDPRPADLTEDKDDDDKPLPYVIDRMQFKQDYQ 182

Query: 292 NATERLTNTLFINISAS-----------------YSPDSSQIVFESDREGKEQLYV---- 330
              +R  + L++                      +SPD   + F SDR     LY     
Sbjct: 183 GYLDRRRDHLYVYTPGDDAPVQITFGDYDDDDPVWSPDGKSVAFVSDRSENPDLYYGSNI 242

Query: 331 ----MQSNGSDQKRISQD--KEASYFDPVWSPQGDLIAFTKFSGEKFA---------IGV 375
               +       K+I++D  +E S   P WSP G  IA+    G             + +
Sbjct: 243 WVVDVDDENHRLKKITKDSGRERS---PSWSPDGKSIAYISSLGPDVGGSALTPTRRLAL 299

Query: 376 MKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            + DG + ++L    D NL  P +S  GR + F  + +G     L SI  +G+N
Sbjct: 300 ARLDGEKRQILTPKLDRNLSDPQFSDDGRRISFRLEDEGQV--HLASIGTDGKN 351


>gi|116620945|ref|YP_823101.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224107|gb|ABJ82816.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 667

 Score = 41.2 bits (95), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 45/104 (43%), Gaps = 5/104 (4%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + + SP   ++VF   R G  QL+    +G  +         +   P WSP G  I+FT 
Sbjct: 127 APAVSPKGDKVVFI--RAG--QLWWAPLDGKAEASQVFQARGACDRPRWSPDGARISFTS 182

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSR 408
             G+   IGV        R L   + N   P WSP GRS+ F R
Sbjct: 183 ARGDHGFIGVFDVAAGALRYLDPSTDNDSEPEWSPDGRSVAFLR 226


>gi|331695749|ref|YP_004331988.1| putative acylaminoacyl-peptidase [Pseudonocardia dioxanivorans
           CB1190]
 gi|326950438|gb|AEA24135.1| putative acylaminoacyl-peptidase [Pseudonocardia dioxanivorans
           CB1190]
          Length = 643

 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 18/143 (12%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-------------VWSP 356
            PD   + + SDR+G+ +LYV +  GS    + + + A   +P              WSP
Sbjct: 40  GPDGRLLAWISDRDGRPRLYVGEL-GSGPAPVVEPRAALPTEPDDRDLPHADVTGVAWSP 98

Query: 357 QGDLIA--FTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGD 413
            G  +A       GE+  + ++  DG + R +   +  +   +WSP+G  L  +    G 
Sbjct: 99  DGSWLACQLAPGGGERTRVLLVSPDGRRRREIAPAATAVVLGSWSPNGSHLGVTIYGSGQ 158

Query: 414 TGSKLYSIDL-NGRNETLINTPA 435
              +   +DL +G +  L + PA
Sbjct: 159 GEGQACLVDLRDGTSTVLASGPA 181


>gi|284097430|ref|ZP_06385538.1| WD40 domain protein beta Propeller [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283831059|gb|EFC35061.1| WD40 domain protein beta Propeller [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 162

 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 9/106 (8%)

Query: 308 SYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           S+SP+S +I F   R G  E LY++     + + +++  +  Y  PVW+P G+ I F ++
Sbjct: 5   SWSPNSKRIAFSLSRPGWLEHLYLLDVETKEIELLTELHKDFY--PVWAPDGNRILFLRW 62

Query: 367 SGE---KFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSR 408
           + E    + I +  K  + E L  V+ +      WSP G  + +SR
Sbjct: 63  NREFDTFYTIDIETK--TIEALFDVDKATGYWADWSPEGDYIAYSR 106



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 52/103 (50%), Gaps = 2/103 (1%)

Query: 265 FSSNGKRALISVQKDEAMD-IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           +S N KR   S+ +   ++ +Y +D+++   E LT  L  +    ++PD ++I+F     
Sbjct: 6   WSPNSKRIAFSLSRPGWLEHLYLLDVETKEIELLTE-LHKDFYPVWAPDGNRILFLRWNR 64

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +  Y +       + +    +A+ +   WSP+GD IA++++
Sbjct: 65  EFDTFYTIDIETKTIEALFDVDKATGYWADWSPEGDYIAYSRW 107


>gi|256841892|ref|ZP_05547398.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256736786|gb|EEU50114.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 1076

 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 5/90 (5%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + SPD   I F    +    +Y + S+G   ++++    A    PVWSP G  IAF   
Sbjct: 29  CAISPDGQTIAFSYQGD----IYTVPSSGGKARQLTT-HPAHDTRPVWSPDGQKIAFASN 83

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               F + +M K+G + + L   S  + PT
Sbjct: 84  RSGNFDVFLMNKEGGEPKRLTTHSTNEYPT 113



 Score = 40.4 bits (93), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 79/198 (39%), Gaps = 27/198 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NGK      + D    +Y   ++   T ++TNT     +  +SPD   +V+ ++R G 
Sbjct: 323 SPNGKEVAFITRGD----VYVTSIEYETTRQITNTPQQERNIDFSPDGRSLVYSAERGGT 378

Query: 326 EQLYVMQSNGSDQKRISQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             +Y  +    + K+ +   E           + F P++SP G+ +AF +    +  + V
Sbjct: 379 WGIYESKLTRDEDKQFTYAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLE---NRTTLRV 435

Query: 376 MKKDGSQERLLVEDSNL-------QAPTWSPSGRSLIFSRKKDG---DTGSKLYSIDLNG 425
           + +   Q R +++   L       Q   WSP  +  +      G   +T   L   D +G
Sbjct: 436 INRKTKQVRTVLDGKYLYSYSDGDQHFQWSPDSKWFLVDYISVGGWNNTDIALVKADGSG 495

Query: 426 RNETLINTPAYASDPQWV 443
               L  +     D +WV
Sbjct: 496 EVTNLTESGYSDGDAKWV 513



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/67 (28%), Positives = 31/67 (46%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V        +LT     +    +SPD  +I F S+R G   +++M   G + KR++
Sbjct: 45  DIYTVPSSGGKARQLTTHPAHDTRPVWSPDGQKIAFASNRSGNFDVFLMNKEGGEPKRLT 104

Query: 343 QDKEASY 349
                 Y
Sbjct: 105 THSTNEY 111


>gi|83945181|ref|ZP_00957530.1| Acylaminoacyl-peptidase [Oceanicaulis alexandrii HTCC2633]
 gi|83851351|gb|EAP89207.1| Acylaminoacyl-peptidase [Oceanicaulis alexandrii HTCC2633]
          Length = 687

 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 14/108 (12%)

Query: 351 DPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRS 403
           DP  SP G  +A+ + S +      + AI     +G   R LV  S +  +P WSP    
Sbjct: 42  DPQISPNGRWVAYQRRSNDIMTDQTRSAIWTAPYEGGANRPLVTGSGDYSSPRWSPDSSQ 101

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPA------YASDPQWVGF 445
           ++F   ++G++  K   +D NGR+ TL   P       ++ D +W+ F
Sbjct: 102 IVFIANENGESLLKKVWVD-NGRSATLAQLPGGAGNLSWSPDGRWIAF 148



 Score = 40.0 bits (92), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 78/199 (39%), Gaps = 20/199 (10%)

Query: 241 LMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDEAMD------IYSVDLQSN 292
           L  ++ +  P +  +  S+ +A  P+ S NG+      + ++ M       I++   +  
Sbjct: 19  LAASQAEGGPLQAADIFSLEMARDPQISPNGRWVAYQRRSNDIMTDQTRSAIWTAPYEGG 78

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQL-YVMQSNGSDQKRISQDKEASYFD 351
           A   L        S  +SPDSSQIVF ++  G+  L  V   NG           A    
Sbjct: 79  ANRPLVTGSGDYSSPRWSPDSSQIVFIANENGESLLKKVWVDNGRSATLAQLPGGAGNLS 138

Query: 352 PVWSPQGDLIAFTKF---SGEKFAIGVMKKDGSQE---RLLVEDSN---LQAPTWSPSGR 402
             WSP G  IAFT F      +  IG+  K    E     LV+++           PSG 
Sbjct: 139 --WSPDGRWIAFTMFMPTPEPQVDIGMPDKPRGAEWAAPALVDETTRYEFDGAGELPSGY 196

Query: 403 SLIFSRKKDGDTGSKLYSI 421
           S IF    DG    +L  +
Sbjct: 197 SQIFVAPADGGAPRQLTHV 215


>gi|329957269|ref|ZP_08297789.1| WD40-like protein [Bacteroides clarus YIT 12056]
 gi|328522982|gb|EGF50085.1| WD40-like protein [Bacteroides clarus YIT 12056]
          Length = 1090

 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 32/60 (53%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V +      +LT     +    +SPDS +I F SDR G   +Y++   G + +R++
Sbjct: 45  DIYTVPVGGGRAMQLTTNPAHDTEPVWSPDSKRIAFASDRMGSMDVYIVSKEGGEPRRLT 104



 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 14/109 (12%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S NGK     ++ D    +Y   +    T+++TNT        ++PD   +V+ S+R G
Sbjct: 322 LSPNGKEVAFVLRGD----VYVTSVDYKTTKQITNTPCQERDVDFAPDGRSLVYASERNG 377

Query: 325 KEQLYVMQSNGSDQKRIS----------QDKEASYFDPVWSPQGDLIAF 363
             QLY       D+K+ +           D + + F   +SP G  +AF
Sbjct: 378 LWQLYTSAIVRKDEKQFTYATELKEERLTDSDVTSFQLQYSPDGKEVAF 426



 Score = 37.0 bits (84), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 18/122 (14%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD + I F      K  +Y +   G    +++ +  A   +PVWSP    IAF      
Sbjct: 32  SPDGTTIAFTY----KGDIYTVPVGGGRAMQLTTNP-AHDTEPVWSPDSKRIAFASDRMG 86

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              + ++ K+G + R L   S  + P        + FS     D G  L+S D+    ET
Sbjct: 87  SMDVYIVSKEGGEPRRLTTHSGSETP--------VAFS-----DAGHILFSADIMPSAET 133

Query: 430 LI 431
           ++
Sbjct: 134 VL 135


>gi|311030234|ref|ZP_07708324.1| acylamino-acid-releasing enzyme [Bacillus sp. m3-13]
          Length = 592

 Score = 41.2 bits (95), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 14/147 (9%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--- 308
           ++ N     L+P    + K+ + S       +++++DL +     LT   F N S     
Sbjct: 14  KVFNIEDFTLSP----DEKQLVYSTNLTGHYNVWAMDLPNQYPYPLT---FNNQSCHGLK 66

Query: 309 YSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           Y P+   I+   D++G E  QLY + S G + + +  D E  + +P +S  G  I +T  
Sbjct: 67  YDPNGKYILASFDKDGNELAQLYALPSRGGELQDVRVDNEHRHMNPSFSKDGQRIYYTST 126

Query: 367 SGEKFAIGVMKKD--GSQERLLVEDSN 391
              +  +     D    +E+LLVE ++
Sbjct: 127 KDNQTYLNCFCYDLETKEEKLLVEGTD 153


>gi|153808296|ref|ZP_01960964.1| hypothetical protein BACCAC_02584 [Bacteroides caccae ATCC 43185]
 gi|149129199|gb|EDM20415.1| hypothetical protein BACCAC_02584 [Bacteroides caccae ATCC 43185]
          Length = 1096

 Score = 41.2 bits (95), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y   +    T+++TNT       S++PD   +V+ S+R G  QLY       ++K+ +
Sbjct: 335 DVYVTSIDYKTTKQITNTPDQERDISFAPDGRTLVYSSERNGLWQLYTSTIVRKEEKQFT 394

Query: 343 QDKE----------ASYFDPVWSPQGDLIAF 363
              E           + F P +SP G  IAF
Sbjct: 395 YATELKEECLTKSNVASFQPQYSPDGKEIAF 425



 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 30/60 (50%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V        ++T     + +  +SPD  QI F SDR G   ++V+   G   +R++
Sbjct: 45  DIYTVPSTGGRATQITTNPAFDTTPVWSPDGKQIAFASDRMGSLDVFVVAKEGGVPQRLT 104



 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 9/103 (8%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFT 364
            + SPD + I F      K  +Y + S G    +I+ +     FD  PVWSP G  IAF 
Sbjct: 29  CALSPDGTTIAFTY----KGDIYTVPSTGGRATQITTNPA---FDTTPVWSPDGKQIAFA 81

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                   + V+ K+G   + L   S  + P      + ++F+
Sbjct: 82  SDRMGSLDVFVVAKEGGVPQRLTTHSGSEKPVAYKDDKHILFT 124


>gi|291294725|ref|YP_003506123.1| WD40 domain-containing protein beta Propeller [Meiothermus ruber
           DSM 1279]
 gi|290469684|gb|ADD27103.1| WD40 domain protein beta Propeller [Meiothermus ruber DSM 1279]
          Length = 901

 Score = 41.2 bits (95), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 39/84 (46%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS +G+  + S   +   ++Y+  L+  A  ++TN L      ++S    QI+F    
Sbjct: 483 PVFSPDGRYVIYSSDVNRVYNLYAYRLEDGAVFQVTNLLTGAFQPTFSHSQQQIIFSGYD 542

Query: 323 EGKEQLYVMQSNGSDQKRISQDKE 346
           E    LY +  N S  KR+   +E
Sbjct: 543 ETGYNLYQLPYNPSAWKRVELPRE 566


>gi|288555459|ref|YP_003427394.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Bacillus pseudofirmus OF4]
 gi|288546619|gb|ADC50502.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Bacillus pseudofirmus OF4]
          Length = 663

 Score = 41.2 bits (95), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 8/104 (7%)

Query: 310 SPDSSQIVF------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD   +VF      E   + +  L++   +G  Q R     + S   P WSP G  IAF
Sbjct: 22  SPDGKNVVFVQTVINEDKHDYESHLFISDIDGK-QVRQWTFGDGSDNTPAWSPDGRFIAF 80

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIF 406
           T     K  I ++  +G + R +    N  + P WSP    ++F
Sbjct: 81  TSTRSGKSQIYLISAEGGEARQITSCLNGAKNPIWSPDSSKILF 124



 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           + ++SPD   I F S R GK Q+Y++ + G + ++I+     +  +P+WSP    I F
Sbjct: 68  TPAWSPDGRFIAFTSTRSGKSQIYLISAEGGEARQITSCLNGAK-NPIWSPDSSKILF 124



 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 23/203 (11%)

Query: 217 PRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRA 272
           P+ SP+ + V +      +D+     +L  + ID    R   F       P +S +G+  
Sbjct: 19  PQLSPDGKNVVFVQTVINEDKHDYESHLFISDIDGKQVRQWTFGDGSDNTPAWSPDGRFI 78

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +  +     IY +  +     ++T+ L    +  +SPDSS+I+FE      E+L    
Sbjct: 79  AFTSTRSGKSQIYLISAEGGEARQITSCLNGAKNPIWSPDSSKILFEGSLAPNEKL---- 134

Query: 333 SNGSDQKRISQDKEASYFDPVWSP--------QGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              +D+KR   DK+    D +  P        + D   F     +   I V  + G   +
Sbjct: 135 ---TDKKR---DKKEKNGDKLPEPMVVERIRYKSDATGFLDDKNQHLGI-VTVETGEVLQ 187

Query: 385 LLVEDSNLQAPTWSPSGRSLIFS 407
           L   D +  A  WS  G+S++FS
Sbjct: 188 LTDGDRDHAAGAWSADGQSIVFS 210


>gi|317011325|gb|ADU85072.1| translocation protein TolB [Helicobacter pylori SouthAfrica7]
          Length = 417

 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 98/217 (45%), Gaps = 15/217 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALIS 275
           PR++  +Q   Y T   E   +  ++   I +A  ++I + + M +    SS+G + L+S
Sbjct: 190 PRWANAEQTEFYYTQYGER--KPMILKYNIQKATHEKITSSQGMAVVSSVSSDGSKILMS 247

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +  D   D+Y  D     + ++T+   I++S  +  D   + F SDR G   +Y M+  G
Sbjct: 248 LAPDGQPDVYLYDTHKKTSTKITHYPGIDVSGVFLEDDKSMAFVSDRSGYPNIY-MKKLG 306

Query: 336 ---SDQKRISQDKEASYFDP-----VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
              S ++ + + +     D      V+  + +L    +F    F + ++  +    R L 
Sbjct: 307 LKESAEQLLYEGRSNESIDAYKDSIVYVSRENL---NEFGKTVFNLNLITLNSKYIRRLT 363

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            + + Q P +S  G+++++ +K   +    L  +D N
Sbjct: 364 VNGSNQMPRFSIDGKNIMYIKKTPQEYAMGLILLDYN 400


>gi|304398058|ref|ZP_07379933.1| WD40 domain protein beta Propeller [Pantoea sp. aB]
 gi|304354344|gb|EFM18716.1| WD40 domain protein beta Propeller [Pantoea sp. aB]
          Length = 422

 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 17/128 (13%)

Query: 296 RLTNTLFINISASY----SPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYF 350
           RLT++  + +   +    +PD SQI F     G+  QL+++  NG + ++I+    +   
Sbjct: 286 RLTHSRGVALQPRHWLRAAPDGSQIAFLMADAGEVIQLWMVSPNGGEPRQITHLSHSIQS 345

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLL---VEDSNLQAPTWSPSGRSL 404
              W P+G  IAF   +       VM+ D   G+ +RL     E  +  A  WSP G  +
Sbjct: 346 AFSWHPEGQAIAFICDNS------VMRCDIESGACQRLTGRTEEAPSGDAVVWSPDGTQI 399

Query: 405 IFSRKKDG 412
            + R+ +G
Sbjct: 400 AYMREVNG 407


>gi|328884293|emb|CCA57532.1| hypothetical protein SVEN_4246 [Streptomyces venezuelae ATCC 10712]
          Length = 575

 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 51/241 (21%), Positives = 99/241 (41%), Gaps = 19/241 (7%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI----LFEPRFSPNQQKVAYATY 231
           R++F     V G+  +S+  ++ DG + R L PS   +    +    +SP+  ++A+   
Sbjct: 58  RVVFTEYKTVDGVRHSSIITVNTDGTDRRTLVPSGPGLTPADISGVSYSPDGLRMAFINN 117

Query: 232 DDEDILRVYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRALISVQKDEAMD---IYS 286
           D    + V   D R  R P R  +      +    ++ +GK+  +S +     D   I  
Sbjct: 118 DGYGDIWVADADGRNAR-PVRMDVDEPDGWLTGLDWTPDGKQLYLSFRGKPGHDRLRIMR 176

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V+L        T   ++  S   + D+   V    R    +   +++   D +   + ++
Sbjct: 177 VNLDG------TGLGYVFASPERTWDTQVDVAWDGRITFLRGSTIRT--WDPRVGGEPQQ 228

Query: 347 ASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +Y   P +SP G+ +AF  +    + +     DG  E  L +  N+  P WSP G  + 
Sbjct: 229 VAYGLHPTFSPDGERLAFAAYVDGAYDVRARVLDGGAEYSLSKGKNVLFPEWSPDGSQVA 288

Query: 406 F 406
           +
Sbjct: 289 Y 289


>gi|289165013|ref|YP_003455151.1| acylaminoacyl-peptidase protein [Legionella longbeachae NSW150]
 gi|288858186|emb|CBJ12054.1| putative acylaminoacyl-peptidase protein [Legionella longbeachae
           NSW150]
          Length = 239

 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 8/119 (6%)

Query: 310 SPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SPD   I + +   +     L +++       ++      + F+PVWSP    + F  F 
Sbjct: 5   SPDGKYIAYNTADHQSTNRYLAIVELKSGKVAQLQHIPSKNNFNPVWSPDSKKLIFNTFI 64

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              + + ++ KD S   LL    N   P W+  G S       D +T   +Y ++L G+
Sbjct: 65  NNNWYLALINKDSSGYLLLNNTQNKYTPVWAQDGNSFF---THDLET---IYWMNLEGK 117


>gi|288917388|ref|ZP_06411755.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Frankia sp. EUN1f]
 gi|288351253|gb|EFC85463.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Frankia sp. EUN1f]
          Length = 785

 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 16/134 (11%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TK 365
           S  PD + + F  DR G   L++ +S+G++  R+           +WSP G  IA     
Sbjct: 80  SPGPDGA-LAFVGDRTGTPALWIRESDGTE--RVVDTGPGQVRSVLWSPDGTWIALVVAP 136

Query: 366 FSGEKFAIGVMKKDGSQERLL--------VEDSNLQAPTWSPSGRSLIFSRK-KDGDTGS 416
             GE+  + V++ DG+    L         E S   A  W   GR L+ +   + G T  
Sbjct: 137 GGGERTEVRVVQPDGTGLHQLAGGHPAGTAEPSAATAVRWLAGGRLLLVTESVRSGLT-- 194

Query: 417 KLYSIDLNGRNETL 430
              ++DL+G    L
Sbjct: 195 HALAVDLSGHRRHL 208


>gi|32472592|ref|NP_865586.1| TolB protein [precursor] [Rhodopirellula baltica SH 1]
 gi|32443829|emb|CAD73270.1| probable TolB protein [Precursor] [Rhodopirellula baltica SH 1]
          Length = 1181

 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 54/127 (42%), Gaps = 18/127 (14%)

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQ 357
            TL    S  +SPD +QIV++          +M+    G D   +          P +SP 
Sbjct: 921  TLLHVGSPDWSPDGTQIVYDQQAGSTLTARLMRVDKTGGDPVDLGFGSM-----PTFSPD 975

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            G  IA   FS  +  +G+M  DGS   +L  DS+     WSP    L +S      +G  
Sbjct: 976  GKRIA---FSAARQGVGIMDADGSNRTIL--DSSGWGIQWSPIPNLLAYS------SGGS 1024

Query: 418  LYSIDLN 424
            LY  DLN
Sbjct: 1025 LYVWDLN 1031



 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            K  L V++ +G+D + +++  E       P WSP G  I + + +G      +M+ D + 
Sbjct: 899  KPVLSVVRIDGTDLRDLAEPNETLLHVGSPDWSPDGTQIVYDQQAGSTLTARLMRVDKTG 958

Query: 383  ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                V+      PT+SP G+ + FS  + G     +  +D +G N T++++  + 
Sbjct: 959  GD-PVDLGFGSMPTFSPDGKRIAFSAARQG-----VGIMDADGSNRTILDSSGWG 1007


>gi|156742232|ref|YP_001432361.1| WD40 domain-containing protein [Roseiflexus castenholzii DSM 13941]
 gi|156233560|gb|ABU58343.1| WD40 domain protein beta Propeller [Roseiflexus castenholzii DSM
           13941]
          Length = 348

 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 10/156 (6%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISA-----SYSPDSSQIVF--ESDREGKEQLYVMQSN 334
           + ++S+  Q+    RL   ++ + +      +++PD S IVF  E    G     +    
Sbjct: 172 LALFSMPAQAGGARRL---IYADDAGHVGRVTHAPDGSAIVFVLEPATTGGVSQILRYDR 228

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            +             +DP +SP G  +AF    G++  I  +   G     L      +A
Sbjct: 229 ATGAVTPQPGIPPQSYDPAFSPDGRWLAFAGRDGDRTDIFAIPTAGGTIVRLTSIGTARA 288

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           P +SP GR + F      + G  L+  DL    ++L
Sbjct: 289 PAFSPDGRMIAFLAVAPAEIGFDLWVADLRMIGDSL 324


>gi|149279157|ref|ZP_01885290.1| putative exported peptidase [Pedobacter sp. BAL39]
 gi|149230159|gb|EDM35545.1| putative exported peptidase [Pedobacter sp. BAL39]
          Length = 1080

 Score = 41.2 bits (95), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 17/144 (11%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           N L++   A  SPD   I F      K  +Y++ + G     ++ + EA    PVWSP G
Sbjct: 22  NPLWMRYPA-ISPDGKNIAFGY----KGDIYLVSAAGGQATPLTIN-EAQDMMPVWSPDG 75

Query: 359 DLIAFTKFSGEKFAI-GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS- 416
             +AF       F +  +    G+  RL    +N     +SP G+ +IF   ++    + 
Sbjct: 76  KTLAFASNRYGNFDVFSIPVAGGNPVRLTFNSANDYPYDFSPDGKEVIFGSARNSTAQNV 135

Query: 417 ---------KLYSIDLNGRNETLI 431
                     LYS+ LNG    LI
Sbjct: 136 RFASPRVFQNLYSVKLNGSRPHLI 159



 Score = 40.8 bits (94), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 36/224 (16%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSM 259
           +R+L+ + D  L    FS N +   +        L+V +++   D   K     GN    
Sbjct: 266 VRHLSRANDNTLC---FSQNGEIYTFMENGTPTKLKVSILNDGRDNIVKTEPVNGNVTEF 322

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +L+P    NGK  +  V + E   I+   ++S  T+++T T     S  +SPDS  +++ 
Sbjct: 323 VLSP----NGKE-IAFVNRGE---IFVTGVESGQTKQITRTAAQERSVQWSPDSKSLIYA 374

Query: 320 SDR-----------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++R           + K++ Y   +   + + + Q   A  F P++SP G  IA+ +   
Sbjct: 375 TERNNSWDIYRSTIQQKDEPYFFAATVINTEPVIQ-TAAEEFQPLYSPDGKEIAYVE--- 430

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLI 405
            +  + V      Q R L+ + +  + +       WSP  + L+
Sbjct: 431 NRNILKVYNIKSKQTRTLLPEGHNHSYSDGDWSFAWSPDSKWLV 474



 Score = 36.6 bits (83), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 58/139 (41%), Gaps = 20/139 (14%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALIS 275
           P  SP+ + +A+    D     +YL+     +A P  I   + M+  P +S +GK    +
Sbjct: 29  PAISPDGKNIAFGYKGD-----IYLVSAAGGQATPLTINEAQDMM--PVWSPDGKTLAFA 81

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-------- 327
             +    D++S+ +      RLT     +    +SPD  +++F S R    Q        
Sbjct: 82  SNRYGNFDVFSIPVAGGNPVRLTFNSANDYPYDFSPDGKEVIFGSARNSTAQNVRFASPR 141

Query: 328 ----LYVMQSNGSDQKRIS 342
               LY ++ NGS    IS
Sbjct: 142 VFQNLYSVKLNGSRPHLIS 160


>gi|284028631|ref|YP_003378562.1| hypothetical protein Kfla_0642 [Kribbella flavida DSM 17836]
 gi|283807924|gb|ADB29763.1| conserved hypothetical protein [Kribbella flavida DSM 17836]
          Length = 285

 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 17/151 (11%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----EGKEQ 327
           A I + +    ++ +V        ++T+  +    A YS D   I F S+R     G  Q
Sbjct: 131 AYIGMDRRGITNVCTVPAAGGDDVQITDDAYAGDGAEYSADGRWIYFNSERAASVPGHAQ 190

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---------IGVMKK 378
           L+ + + G   ++++ D+  ++F P  +P G  +A+  F               I ++  
Sbjct: 191 LFRVPAAGGVPEQLTDDERVNWF-PHPAPDGSAVAYVSFPPGTVGHPADVADVRIRLLTA 249

Query: 379 DGSQERLLV---EDSNLQAPTWSPSGRSLIF 406
           DG    +         +  P+WSP   S  +
Sbjct: 250 DGGIREVATVFGGQGTMNVPSWSPDSNSFAY 280


>gi|291297932|ref|YP_003509210.1| WD40 domain-containing protein [Stackebrandtia nassauensis DSM
           44728]
 gi|290567152|gb|ADD40117.1| WD40 domain protein beta Propeller [Stackebrandtia nassauensis DSM
           44728]
          Length = 309

 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 11/111 (9%)

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIG--VMKKDGSQERLLVEDSN 391
            + K +++DK+    DP  SP G  + F  F G+  K+     +M  DGS  ++  E   
Sbjct: 70  GEHKPLNKDKDIQAQDPSLSPDGRKVLFEGFHGDGGKYVNKKLIMNTDGSGLKIFGE--G 127

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           +  P WSP+G+ L +   +D D  + + S + +G +E  I   A AS+P W
Sbjct: 128 ISTPVWSPNGKRLAY---RDTDRNTIMVS-NPDGTDEREIAEDA-ASNPVW 173


>gi|15805202|ref|NP_293889.1| acyl-peptide hydrolase [Deinococcus radiodurans R1]
 gi|6457834|gb|AAF09754.1|AE001879_2 acyl-peptide hydrolase, putative [Deinococcus radiodurans R1]
          Length = 655

 Score = 41.2 bits (95), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)

Query: 352 PVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRK 409
           P WSP G  +AF + +GE K A+ ++   G + R +    N +  P WSP GR + F+  
Sbjct: 83  PRWSPDGQNLAFVRSAGEVKAALMLLPLKGGEARRVTHFKNGVSGPQWSPDGRFIAFTTT 142

Query: 410 KD 411
            D
Sbjct: 143 AD 144


>gi|332140282|ref|YP_004426020.1| acylaminoacyl-peptidase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550304|gb|AEA97022.1| acylaminoacyl-peptidase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 685

 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S  +SPD S++ + S+ EGK QLYV   + + Q  +  +  +S  +  WSP G  IAFT
Sbjct: 97  SIRWSPDGSRLAYLSNEEGKPQLYVRWMD-TGQTALVTNVTSSPSNITWSPDGKYIAFT 154



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 13/102 (12%)

Query: 265 FSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           F+ NG++   S  + +         DI+SVD+  N  E+LT       S   SPD   I 
Sbjct: 230 FAPNGEKIYFSANRSDNWEYEPVEADIFSVDMTGN-IEQLTQDKGRESSPVVSPDGKYIA 288

Query: 318 FESDREGK-----EQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +    + K       LYVM S+GS+Q+ I++D + S  +  W
Sbjct: 289 YAYRDDEKVMYKNSYLYVMNSDGSEQRNITKDIDNSVSNFHW 330


>gi|212634248|ref|YP_002310773.1| peptidase S41 [Shewanella piezotolerans WP3]
 gi|212555732|gb|ACJ28186.1| Peptidase S41 [Shewanella piezotolerans WP3]
          Length = 1093

 Score = 41.2 bits (95), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 34/60 (56%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+++ DL  +   RLT+     + A+ SPD   + + ++ EG  ++YV+  +G   KR+S
Sbjct: 51  DLWTKDLTESKARRLTSLPAEELGATISPDGQSVAYVANYEGSSEVYVIAIDGGQAKRVS 110


>gi|219753666|emb|CAB60199.2| P100GA2 protein [Haemonchus contortus]
          Length = 825

 Score = 40.8 bits (94), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DI+ V+   N  ++LT+    N  A  SPD   I F S R G  +L+ M ++G++  ++
Sbjct: 558 FDIFMVNKYGNIVKQLTDEPGYNAEAVLSPDGKTIAFTSIRTGDLELWTMNTDGTNLHQV 617

Query: 342 SQDKEASYFDPV-WSPQGDLIAF 363
           +  KE  Y     +SP G  + F
Sbjct: 618 T--KEYGYDGGCFFSPDGKRLVF 638



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 38/177 (21%), Positives = 78/177 (44%), Gaps = 32/177 (18%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--- 322
           S +GK+ + + ++   +D++  D+      +LT     +  AS+SPD  +IVF + R   
Sbjct: 183 SPDGKKIVYTSKQSGDLDLWITDINGALKIQLTKKKGYDGGASFSPDGKKIVFHASRPKT 242

Query: 323 -----------------EGKEQLYVMQSN-----GSDQKRI-SQDKEASYFDPVWSPQGD 359
                              K +LYVM++N     G+D+K +  Q +    + P +     
Sbjct: 243 NEEIAIYDRLLKNDLVATSKMELYVMEANTVCGKGTDEKPLFKQPRGGLDWTPYYHTDNK 302

Query: 360 LIAFT----KFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQA-PTWSPSGRSLIFSRKK 410
            I F+         ++ + ++ +DG+  ER+   +    A P +S  G+ +++S  +
Sbjct: 303 RIIFSSNMNSTKPNEYHLYIVNEDGTGLERVTFGNGYFNAFPVFSHDGKKVVWSSNR 359


>gi|332993975|gb|AEF04030.1| acylaminoacyl-peptidase [Alteromonas sp. SN2]
          Length = 692

 Score = 40.8 bits (94), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 38/191 (19%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--- 261
            TP++ + LF   F P   K A    Y D+   +      R     KR GN +  ++   
Sbjct: 156 FTPTKAKPLFNLDFKPKGAKWAETPQYIDQTNFQ------RDGMGMKRPGNMQIYVVPTI 209

Query: 262 --APR--------------FSSNGKRALISVQ-KDEA------MDIYSVDLQSNATERLT 298
              PR              +S NG++ +IS    DEA       D++S+D++++   RLT
Sbjct: 210 GGTPRQITSGEHDHAGTIAWSDNGQQIIISANTSDEADFDMLNSDLFSIDVKTSKVTRLT 269

Query: 299 NTLFINISASYSPDSSQIVFESDRE-GK----EQLYVMQSNGSDQKRISQDKEASYFDPV 353
           +      S   SP+ ++I F  + + GK      LYVM S+G+  + ++ + + S     
Sbjct: 270 DMSGPERSPHLSPNGNKIAFVGNEDNGKSNQLSHLYVMNSDGTGIENLTSELDRSVGAIK 329

Query: 354 WSPQGDLIAFT 364
           W+  G  + F+
Sbjct: 330 WADNGKGVYFS 340



 Score = 40.4 bits (93), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 36/265 (13%)

Query: 181 SESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           S  +++  ++ +L  +  DG A++  L+ S++   F P FSP+  K+AY +   E  ++V
Sbjct: 63  SMDIMTDSMRRNLWTIALDGSAHLPILSDSKNH--FNPVFSPDGAKMAYLS-SKEGKVQV 119

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLT 298
           YL D     +  R+ +         FS +GK  A       +A  ++++D +    +   
Sbjct: 120 YLKDL-ASNSTTRVTDVAMRPSGMSFSPDGKYLAFAMFTPTKAKPLFNLDFKPKGAKWAE 178

Query: 299 NTLFINISASYSPDSSQIVFESD-----REGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              +I+          Q  F+ D     R G  Q+YV+ + G   ++I+  +        
Sbjct: 179 TPQYID----------QTNFQRDGMGMKRPGNMQIYVVPTIGGTPRQITSGEHDHAGTIA 228

Query: 354 WSPQGDLIA----------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
           WS  G  I           F   + + F+I V  K     RL       ++P  SP+G  
Sbjct: 229 WSDNGQQIIISANTSDEADFDMLNSDLFSIDV--KTSKVTRLTDMSGPERSPHLSPNGNK 286

Query: 404 LIFSRKKDGDTG---SKLYSIDLNG 425
           + F   +D       S LY ++ +G
Sbjct: 287 IAFVGNEDNGKSNQLSHLYVMNSDG 311


>gi|154493786|ref|ZP_02033106.1| hypothetical protein PARMER_03129 [Parabacteroides merdae ATCC
           43184]
 gi|154086399|gb|EDN85444.1| hypothetical protein PARMER_03129 [Parabacteroides merdae ATCC
           43184]
          Length = 1083

 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 4/87 (4%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S NG+    + + D    IY+V        +LT     +    +SPD S+I F SDR
Sbjct: 29  PAISPNGETIAFTYKGD----IYTVPANGGKATQLTTHPAHDTRPIWSPDGSKIAFASDR 84

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASY 349
            G   +++M   G   K+++      Y
Sbjct: 85  NGNFDIFIMDMEGGSPKQLTTHSANEY 111



 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 11/97 (11%)

Query: 351 DPVW------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           DP+W      SP G+ IAFT + G+ +   V    G   +L    ++   P WSP G  +
Sbjct: 22  DPLWMRYPAISPNGETIAFT-YKGDIYT--VPANGGKATQLTTHPAHDTRPIWSPDGSKI 78

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            F+  ++G+    ++ +D+ G +   + T +    P+
Sbjct: 79  AFASDRNGNF--DIFIMDMEGGSPKQLTTHSANEYPE 113



 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 14/138 (10%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SP+   I F      K  +Y + +NG    +++    A    P+WSP G  IAF      
Sbjct: 32  SPNGETIAFTY----KGDIYTVPANGGKATQLTT-HPAHDTRPIWSPDGSKIAFASDRNG 86

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS---------KLYS 420
            F I +M  +G   + L   S  + P      + +++S     D            ++Y 
Sbjct: 87  NFDIFIMDMEGGSPKQLTTHSANEYPETFSDAKHILYSAAIQQDAKDSQFPSGQFPQIYR 146

Query: 421 IDLNGRNETLINTPAYAS 438
           I +NG    L ++ A  S
Sbjct: 147 IGINGGRPELYSSLAMES 164


>gi|227537270|ref|ZP_03967319.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227242874|gb|EEI92889.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 1025

 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 19/170 (11%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNAT-----ERLTNT-----LF 302
           GN   M ++P  S +GK      +KD  ++D++  D  +         RLTN       F
Sbjct: 276 GNSGRMNVSPAISPDGKYVAFLSEKDMFSIDLFLADAHTGKVIRKLGSRLTNKDIDEFSF 335

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA---SYFDPVWSPQGD 359
           +  + ++SPDS +  F     GK +L  M  + +  K +S +       + +  W+  GD
Sbjct: 336 LESAGTFSPDSRKFAFSVFSAGKNKL--MTVDVATGKTLSVEAMGDITEFTNITWAADGD 393

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFS 407
            +AF+        I +      +   L  D  S+ Q P++S  G+S++FS
Sbjct: 394 HVAFSGLKNGHSDIYIYNLKTKKLDQLTNDVYSDFQ-PSFSRDGKSIVFS 442



 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 68/347 (19%), Positives = 127/347 (36%), Gaps = 70/347 (20%)

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVL--VTGRVIKEGKDRLRVE----FRLW------- 131
           ++FKQ++  P      Q  + LG +++     RV+ +G D  R+E      LW       
Sbjct: 99  EAFKQRVVMPVMQINQQTRHVLGHELVHAFQYRVLIDGGDSTRLENIMNLPLWMVEGMAE 158

Query: 132 ----------------------DVKDRKQIIGKKFFSSP-----ASWRKIAHTISDDIYQ 164
                                 D+   KQ+  + +   P     A W  I  T  D +  
Sbjct: 159 YFSIGKKDAFTSMWMRDAYLNKDIPSLKQMTEQSYKYFPYRYGQAFWSYIGSTYGDTVIM 218

Query: 165 SITGEKGDFN-----SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL----- 214
            +  E   +       R+       +S + KNS+  M ++        P    IL     
Sbjct: 219 PLFIETAKYGYEIAMKRVFGYDAQTMSNLWKNSMENMYKNSGKDTVSRPVGTPILNTGNS 278

Query: 215 ----FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---------FRSMIL 261
                 P  SP+ + VA+ +  D   + ++L D    +  +++G+         F  +  
Sbjct: 279 GRMNVSPAISPDGKYVAFLSEKDMFSIDLFLADAHTGKVIRKLGSRLTNKDIDEFSFLES 338

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTN-TLFINISASYSPDSSQIV 317
           A  FS + ++   SV       + +VD+ +  T   E + + T F NI  +++ D   + 
Sbjct: 339 AGTFSPDSRKFAFSVFSAGKNKLMTVDVATGKTLSVEAMGDITEFTNI--TWAADGDHVA 396

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           F   + G   +Y+         +++ D  +  F P +S  G  I F+
Sbjct: 397 FSGLKNGHSDIYIYNLKTKKLDQLTNDVYSD-FQPSFSRDGKSIVFS 442



 Score = 36.6 bits (83), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 33/58 (56%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           ++++G     S  K+   DIY  +L++   ++LTN ++ +   S+S D   IVF +DR
Sbjct: 388 WAADGDHVAFSGLKNGHSDIYIYNLKTKKLDQLTNDVYSDFQPSFSRDGKSIVFSTDR 445


>gi|168184898|ref|ZP_02619562.1| putative lipoprotein [Clostridium botulinum Bf]
 gi|237795341|ref|YP_002862893.1| putative lipoprotein [Clostridium botulinum Ba4 str. 657]
 gi|182672040|gb|EDT84001.1| putative lipoprotein [Clostridium botulinum Bf]
 gi|229260763|gb|ACQ51796.1| putative lipoprotein [Clostridium botulinum Ba4 str. 657]
          Length = 357

 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 20/164 (12%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQLYVM 331
           S+Q  E M IY  DL++    ++ + + ++ S     +  +I++    S++E K ++Y  
Sbjct: 139 SLQSAEGMKIY--DLENKKEIKIKSDVLVSGSLFKWLNEDEILYYGINSEKENKAKIY-- 194

Query: 332 QSNGSDQKRISQDKEASYFDPV------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                 +  + ++KE  Y D +      ++P GD I      G+KF +    K  ++ + 
Sbjct: 195 ------KYNVKENKEEVYVDNIEGICTYFTPNGDDILLLSRHGDKFNLSYYNKKDNRFKK 248

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           + E+ N Q    + S +++ F  K D +    LY ID N  N T
Sbjct: 249 ISEEVN-QIYKGTKSTKNMYFLGKNDLENKDYLYKIDGNTLNLT 291


>gi|313205538|ref|YP_004044715.1| peptidase s41 [Riemerella anatipestifer DSM 15868]
 gi|312444854|gb|ADQ81209.1| peptidase S41 [Riemerella anatipestifer DSM 15868]
 gi|315023408|gb|EFT36418.1| putative Tricorn-like protease [Riemerella anatipestifer RA-YM]
          Length = 1079

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRI 341
           DIY+V  +  +  RLT     +    +SPD   I F SDRE G +++++M S G + K++
Sbjct: 45  DIYAVSTEGGSAVRLTTHPAYDSDPVWSPDGKFIAFSSDRENGFQRIFIMPSQGGEAKQV 104

Query: 342 SQDKEAS 348
           +   +A+
Sbjct: 105 TFHSQAA 111



 Score = 37.0 bits (84), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 7/100 (7%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F    +    +Y + + G    R++    A   DPVWSP G  IAF+     
Sbjct: 32  SPDGKKIAFTYMGD----IYAVSTEGGSAVRLTT-HPAYDSDPVWSPDGKFIAFSSDREN 86

Query: 370 KFA-IGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFS 407
            F  I +M   G + + +   S    P  +S  G+++I+S
Sbjct: 87  GFQRIFIMPSQGGEAKQVTFHSQAALPLAFSKDGKNIIYS 126


>gi|226312266|ref|YP_002772160.1| hypothetical protein BBR47_26790 [Brevibacillus brevis NBRC 100599]
 gi|226095214|dbj|BAH43656.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 599

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 6/142 (4%)

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEA 347
           +SN +E++T      +   +SP  ++ +   D +G E  Q +++  NG+  K ++   + 
Sbjct: 41  ESNRSEQVTFLPDRVVEVDHSPCGTKTIVGMDNKGDERQQFFLLTENGAVVKPLTDAPDY 100

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGRSL 404
            ++   WSP    IA++       +  +  +D   G+ E +   D       W P GR L
Sbjct: 101 FHYLGGWSPCRQKIAWSSNRRNPRSFDIFVQDVESGAYEEVFRYDGRTDPIGWLPDGRGL 160

Query: 405 IFSRKKDGDTGSKLYSIDLNGR 426
           IFS  ++ +  + LY ++L  +
Sbjct: 161 IFS-VQETNIDNCLYLLNLQTK 181


>gi|50954559|ref|YP_061847.1| acylaminoacyl-peptidase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50951041|gb|AAT88742.1| acylaminoacyl-peptidase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 675

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 8/128 (6%)

Query: 260 ILAPRFSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           + AP     G+RA++SV         E   ++++ L  +A  R     F +    +SP  
Sbjct: 12  VSAPAVHPGGERAVVSVTHPSLEADAEVGQLWTIPLAGHAAPRRLTRGFRDSVPRFSPAG 71

Query: 314 SQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             + F  +      QL+V+ + G +   ++ D+     + VW+P G  +AF     E+  
Sbjct: 72  RLLAFLRAGPNAPPQLHVVDAAGGEPVAVT-DRRLGVSEFVWAPDGRTLAFVSRQPEQGR 130

Query: 373 IGVMKKDG 380
            G ++  G
Sbjct: 131 YGTVEGIG 138


>gi|116670739|ref|YP_831672.1| peptidase S9 prolyl oligopeptidase [Arthrobacter sp. FB24]
 gi|116610848|gb|ABK03572.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Arthrobacter sp. FB24]
          Length = 701

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 10/112 (8%)

Query: 260 ILAPRFSSNGKRALISV-QKDEAMDIY-----SVDLQSNATERLTNTLFINISASYSPDS 313
           + AP    +G RA++SV + D   D Y     +V L      R     F + + ++SPD 
Sbjct: 27  VSAPAVHPDGSRAVVSVIRPDFDADTYVGQLWTVPLDPEKLPRRLTRGFRDTAPAFSPDG 86

Query: 314 SQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAF 363
             + F  +  +GK QLYV+++ G + + ++  K   S F   WSP    I F
Sbjct: 87  LVLAFLRATADGKPQLYVVEAAGGEPQVLTNAKLGVSSF--AWSPDSHSIVF 136


>gi|58584725|ref|YP_198298.1| hypothetical protein Wbm0468 [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58419041|gb|AAW71056.1| Predicted protein [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 68

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 2/70 (2%)

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           MK D  +ERLL E  +   P+ +   +  IF+ K +  + SKLY +DL  ++  +I+TP 
Sbjct: 1   MKSDDKEERLLSEK-HKSNPSMAVKWQRNIFT-KTESQSSSKLYLVDLAKKSHKIISTPT 58

Query: 436 YASDPQWVGF 445
            A  P W  F
Sbjct: 59  SAYLPDWSHF 68


>gi|319788383|ref|YP_004147858.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Pseudoxanthomonas suwonensis 11-1]
 gi|317466895|gb|ADV28627.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 800

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 8/150 (5%)

Query: 264 RFSSNGKRALISVQKDEAMD--IYSVDLQS---NATERLTNTLFINISAS---YSPDSSQ 315
           R+S +G+   + ++  +  D  I SVDL         RLT+  +IN + +   + PD+  
Sbjct: 350 RWSDDGRNVAVMLRAIDNKDRWIASVDLDQARLQPRHRLTDPAWINWNFNEFGWLPDNQT 409

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + F S+  G   LY    NG  ++R S   EAS   P    +G L    +     + +  
Sbjct: 410 LWFVSEESGYAHLYTQSGNGRPRQRTSGRWEASAPVPTADGRGLLFLCNRAWPGDYEVCA 469

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +     Q R +     ++    SP GR L+
Sbjct: 470 LDLGSDQVREVTALDGVEDFVLSPDGRQLL 499


>gi|268316730|ref|YP_003290449.1| WD40 domain-containing protein beta Propeller [Rhodothermus marinus
           DSM 4252]
 gi|262334264|gb|ACY48061.1| WD40 domain protein beta Propeller [Rhodothermus marinus DSM 4252]
          Length = 947

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 33/64 (51%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S++G+  L +   D   +IY++++ S    RLTN  F  +  + SPD   + F   R  
Sbjct: 499 WSADGQWLLFTADPDSVPNIYALEVASGRVRRLTNVAFGALEPALSPDGRHLAFIHYRHE 558

Query: 325 KEQL 328
           + +L
Sbjct: 559 RYEL 562


>gi|332018511|gb|EGI59101.1| WD repeat-containing protein 23 [Acromyrmex echinatior]
          Length = 465

 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 3/111 (2%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ Q  AY+++ D  + + ++ D  I+  P   G  R  + +  FS+NG+  ++    
Sbjct: 151 FSPDGQHFAYSSWADC-LYQCHISDDSIETLPLHPGVRRFCVFSLAFSNNGEE-ILGGAN 208

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D  + IYS+  Q      + +   +N    Y+ +SSQI +    +G  +++
Sbjct: 209 DRCLYIYSLYCQRRFERFIGHEEDVN-CVGYADNSSQIFYSGGDDGLCKVW 258


>gi|262164636|ref|ZP_06032374.1| protease-related protein [Vibrio mimicus VM223]
 gi|262027016|gb|EEY45683.1| protease-related protein [Vibrio mimicus VM223]
          Length = 1085

 Score = 40.8 bits (94), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 23/137 (16%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  QI F        Q++++ + G +   +++    S   PVWSP    +AFT     
Sbjct: 48  SPDGKQIAFTY----AGQIWLVPAQGGEAIALTESGVYSE-APVWSPDSQSLAFT---AN 99

Query: 370 KFAIG---VMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDT----------- 414
           ++ +G   ++   G + R L        P  +S  G+ L FS ++ GD            
Sbjct: 100 RYGMGDVFILAVQGGESRRLTYHGAKDTPYAFSADGKQLYFSSRRLGDEKANANVKQGGF 159

Query: 415 GSKLYSIDLNGRNETLI 431
            ++LYS+ + G  E L+
Sbjct: 160 TAQLYSVPVTGGREQLV 176



 Score = 37.0 bits (84), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 25/186 (13%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRI 341
           D+Y V L S  T+R+T+T     + ++S D  ++++ S+R G   +Y    N G      
Sbjct: 355 DVYVVSLLSGLTQRITDTPEAERNIAFSSDGFRLIYASERGGSWDIYQSYVNDGGKSFST 414

Query: 342 SQD--------KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           S D         E     P++SP    IA+ +    +  + V   +  +   L++D  L 
Sbjct: 415 SLDIVEESVLTAEEDLIQPLYSPNNKRIAYRE---NRNTLKVYDIEQDKTFTLLDDQALY 471

Query: 394 -------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDP 440
                  +  WSP    L+   +   +   +L   D +     L N+      P ++SD 
Sbjct: 472 SYFDSDLSYQWSPDSEYLVTRDRAAFNGDIQLLKFDSSEAPVNLSNSGFSEFDPQFSSDG 531

Query: 441 QWVGFM 446
           QWV ++
Sbjct: 532 QWVYWL 537


>gi|332308770|ref|YP_004436620.1| transcriptional regulator domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332176099|gb|AEE25352.1| transcriptional regulator domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 706

 Score = 40.8 bits (94), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 95/222 (42%), Gaps = 14/222 (6%)

Query: 219 FSPNQQKVAYATYD----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           FSP+ +++A +       +ED+    L   +++      G  R +   P    NG R + 
Sbjct: 322 FSPDSKQLALSRSASDGMNEDLFLYDLNTQQMEYLVATKGRLRGLTWHP----NGDRIIY 377

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             ++    + Y V L+  +T  L    F     S+ P+S ++V+ S RE   +L  +  +
Sbjct: 378 GGEESGRRNGYLVSLKDKSTINLNVDGFS--YPSFVPNSHEVVYHS-RENITKLSTLDLS 434

Query: 335 GSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSN 391
            +    +     ++Y   DP +S + + I F         I     DGS  + L +   +
Sbjct: 435 ETTGATLFPLIHSNYIYKDPHYSEENNSIVFISTESGYEEIWRADPDGSNRKQLTKLKRH 494

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           L +P WS +G+S+ F         S L+ ++L   N T +++
Sbjct: 495 LSSPRWSHNGQSIAFFAPDKKTKRSALFVLNLQEGNLTQLDS 536



 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 8/131 (6%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L ++ +I     YS +++ IVF S   G E+++    +GS++K++++ K      P WS 
Sbjct: 444 LIHSNYIYKDPHYSEENNSIVFISTESGYEEIWRADPDGSNRKQLTKLKR-HLSSPRWSH 502

Query: 357 QGDLIAFTKFSGEK----FAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            G  IAF  F+ +K     A+ V+  ++G+  +L  E      P+W      L+   K  
Sbjct: 503 NGQSIAF--FAPDKKTKRSALFVLNLQEGNLTQLDSEFDQYYRPSWLRDDSGLLAGAKFK 560

Query: 412 GDTGSKLYSID 422
           G+     + ID
Sbjct: 561 GNLALYGFPID 571


>gi|77361985|ref|YP_341559.1| putative peptidase [Pseudoalteromonas haloplanktis TAC125]
 gi|76876896|emb|CAI89113.1| putative peptidase [Pseudoalteromonas haloplanktis TAC125]
          Length = 672

 Score = 40.8 bits (94), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 1/84 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +I++VD ++   + LT+ + ++ S   SPD S++ F S+R+G  Q+Y+         +IS
Sbjct: 64  NIWTVDYKTRQIQPLTSGVHMDHSPKLSPDGSRLAFISNRDGSNQIYMKWLKTGAVSKIS 123

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF 366
            +  ++     WSP    +AF+ F
Sbjct: 124 -NLTSTPKALSWSPDAKQLAFSMF 146



 Score = 36.2 bits (82), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 54/260 (20%), Positives = 100/260 (38%), Gaps = 82/260 (31%)

Query: 239 VYLMDTRID-RAPKRIGNFRS----------------MILAPRFSSNGKRALISVQKDEA 281
           VY +  R+D +  ++IGN  +                M  +P+ S +G R      +D +
Sbjct: 47  VYFVRNRMDIKTDRKIGNIWTVDYKTRQIQPLTSGVHMDHSPKLSPDGSRLAFISNRDGS 106

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---------------------- 319
             IY   L++ A  +++N      + S+SPD+ Q+ F                       
Sbjct: 107 NQIYMKWLKTGAVSKISNLTSTPKALSWSPDAKQLAFSMFVATTSSSPISLPGKPEGATW 166

Query: 320 ------------------SDREGKEQLYVMQSNGSDQKRI-------------SQDKEAS 348
                               ++G EQL+++ +NG + K++             S+DK+A 
Sbjct: 167 AEPAKYIDDVYYRADGAGYAKKGFEQLFIIDANGGNAKQLTFDDFNNGGEVSFSKDKKAL 226

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIF 406
           YF    + + +       + E + + ++    + E   V D N   + P  SP+GR L +
Sbjct: 227 YFS---ANRHNNYLLKPTNSEVYKLNLI----TLEVTAVTDRNGPDRQPQVSPNGRYLAY 279

Query: 407 SRKKDGDT---GSKLYSIDL 423
           +   D  T    ++LY  DL
Sbjct: 280 TGYDDKQTNYENTQLYIRDL 299


>gi|313675841|ref|YP_004053837.1| hypothetical protein [Marivirga tractuosa DSM 4126]
 gi|312942539|gb|ADR21729.1| WD40-like beta Propeller containing protein [Marivirga tractuosa
           DSM 4126]
          Length = 1082

 Score = 40.8 bits (94), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 8/89 (8%)

Query: 239 VYLMDTRIDRAPKR----IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +YL D   ++  KR          M + P    NGK A++S   +   D+Y +       
Sbjct: 376 LYLYDPYTNKFQKRDLRRFDQVNHMDIYP----NGKTAVLSANVNAQSDLYLISTGRPNI 431

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDRE 323
            RLTN +F N+  S+ P + +IVF S+R+
Sbjct: 432 RRLTNDVFDNLYPSFIPSTKRIVFASNRK 460


>gi|119773893|ref|YP_926633.1| peptidase [Shewanella amazonensis SB2B]
 gi|119766393|gb|ABL98963.1| peptidase, putative [Shewanella amazonensis SB2B]
          Length = 688

 Score = 40.8 bits (94), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 113/294 (38%), Gaps = 72/294 (24%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMDT------- 244
           L + DRDG   R +T +      EP FSP+   +A+ +  D +D  ++YL+         
Sbjct: 80  LWLFDRDGKKQRPIT-AEGLGASEPVFSPDSSTLAFVSKRDKDDAGQIYLLPMTGPGEAQ 138

Query: 245 RIDRAP------KRIGNFRSMI--LAP-----------------RFSSNGKRALISVQKD 279
           R+   P      K +G     I  + P                 + S+    AL   Q D
Sbjct: 139 RLTEVPTGVYGIKWVGKHLYFIANVWPQKSWDEMAEQIKADKDKKLSARQWNALPYSQFD 198

Query: 280 EAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             +D      ++ +     A E +T  L   +     P SSQ   + D +  EQ     S
Sbjct: 199 HWLDEDRQAHVFRIAASGGAVEAITQPLGREL-----PRSSQSSADYDIDANEQYIAFTS 253

Query: 334 NGSDQK------------------RISQDKEASYFDPVWSPQGDLIAFTK-----FSGEK 370
           NG D +                   ++ D +A    P +SP GD +AF++     F  + 
Sbjct: 254 NGWDNQVDPNIDLFLARIGGNQADNLTPDNKAPDDSPSFSPDGDTLAFSRQHIQGFYADT 313

Query: 371 FAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             + +   D  + + L +  D +L +  WS  G+SL FS   D  T  +LY ID
Sbjct: 314 ARLMLYDMDSKKLQSLTDGWDRSLGSFVWSKDGKSL-FSNIDDAAT-QRLYQID 365


>gi|300772906|ref|ZP_07082775.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300759077|gb|EFK55904.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 1025

 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 15/168 (8%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNAT-----ERLTNT-----LF 302
           GN   M ++P  S +GK      +KD  ++D++  D  +         RLTN       F
Sbjct: 276 GNSGRMNVSPAISPDGKYVAFLSEKDMFSIDLFLADAHTGKVIRKLGSRLTNKDIDEFSF 335

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +  + ++SPDS +  F     GK +L  +  + G      +      + +  W+  GD +
Sbjct: 336 LESAGTFSPDSRKFAFSVFSAGKNKLMTVDIATGKTLSVEAMGDITEFTNITWAADGDHV 395

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFS 407
           AF+        I +      +   L  D  S+ Q P++S  G+S++FS
Sbjct: 396 AFSGLKNGHSDIYIYNLKTKKLDQLTNDVYSDFQ-PSFSRDGKSIVFS 442



 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 68/347 (19%), Positives = 127/347 (36%), Gaps = 70/347 (20%)

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVL--VTGRVIKEGKDRLRVE----FRLW------- 131
           ++FKQ++  P      Q  + LG +++     RV+ +G D  R+E      LW       
Sbjct: 99  EAFKQRVVMPVMQINQQTRHVLGHELVHAFQYRVLIDGGDSTRLENIMNLPLWMVEGMAE 158

Query: 132 ----------------------DVKDRKQIIGKKFFSSP-----ASWRKIAHTISDDIYQ 164
                                 D+   KQ+  + +   P     A W  I  T  D +  
Sbjct: 159 YFSIGKKDAFTSMWMRDAYLNKDIPSLKQMTEQSYKYFPYRYGQAFWSYIGSTYGDTVIM 218

Query: 165 SITGEKGDFN-----SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL----- 214
            +  E   +       R+       +S + KNS+  M ++        P    IL     
Sbjct: 219 PLFIETAKYGYEIAMKRVFGYDAQTMSNLWKNSMENMYKNSGKDTVSRPVGTPILNTGNS 278

Query: 215 ----FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---------FRSMIL 261
                 P  SP+ + VA+ +  D   + ++L D    +  +++G+         F  +  
Sbjct: 279 GRMNVSPAISPDGKYVAFLSEKDMFSIDLFLADAHTGKVIRKLGSRLTNKDIDEFSFLES 338

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTN-TLFINISASYSPDSSQIV 317
           A  FS + ++   SV       + +VD+ +  T   E + + T F NI  +++ D   + 
Sbjct: 339 AGTFSPDSRKFAFSVFSAGKNKLMTVDIATGKTLSVEAMGDITEFTNI--TWAADGDHVA 396

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           F   + G   +Y+         +++ D  +  F P +S  G  I F+
Sbjct: 397 FSGLKNGHSDIYIYNLKTKKLDQLTNDVYSD-FQPSFSRDGKSIVFS 442



 Score = 36.6 bits (83), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 18/58 (31%), Positives = 33/58 (56%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           ++++G     S  K+   DIY  +L++   ++LTN ++ +   S+S D   IVF +DR
Sbjct: 388 WAADGDHVAFSGLKNGHSDIYIYNLKTKKLDQLTNDVYSDFQPSFSRDGKSIVFSTDR 445


>gi|116625880|ref|YP_828036.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229042|gb|ABJ87751.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 501

 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 11/137 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           ++SPD + + F      ++   +YV Q       R++ D       PV+SP G  IAFT+
Sbjct: 348 AFSPDGNLLAFSWAGPNRDNYDIYVQQIGAGTPLRLTTDPGEDR-SPVFSPDGRYIAFTR 406

Query: 366 FSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFS-RKKDGDT-GSKLYSID 422
              E+  I V    G + +L LV  +N+    +SP G+++  S R+  GD  G  L SI+
Sbjct: 407 --NERTLILVPALGGPERKLSLVGAANID---FSPDGKTIAISDRESAGDPLGLFLVSIE 461

Query: 423 LNGRNETLINTPAYASD 439
              R       P    D
Sbjct: 462 TGNRQRLTTAPPGIGGD 478


>gi|159030307|emb|CAO91202.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 170

 Score = 40.8 bits (94), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 14/114 (12%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-----QDKEASYFDPVWSPQGDLIA 362
           SYS D   + F SDR G+  +Y+       +KR+         ++S   P  +  G LIA
Sbjct: 51  SYSADGRYLAFASDRSGRRSIYLFD---LQEKRLVNLPNLNRGDSSQDQPSLNADGRLIA 107

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDG 412
           +   S E+    VM  D S+ R  +  +NL+     PT S  GR + F   +DG
Sbjct: 108 Y--ISSERGKSDVMVYDRSRSRTTLLTANLRGSVRNPTISGDGRQIAFETNQDG 159


>gi|313204200|ref|YP_004042857.1| wd40-like beta propeller containing protein [Paludibacter
           propionicigenes WB4]
 gi|312443516|gb|ADQ79872.1| WD40-like beta Propeller containing protein [Paludibacter
           propionicigenes WB4]
          Length = 694

 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 11/87 (12%)

Query: 310 SPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLI 361
           SPD +++++       ++ +G  +L+VM ++GSD+K+I++   +EA+     W   G  I
Sbjct: 59  SPDKTKVLYSVSYYSITENKGNSELFVMNTDGSDKKQITKTATREAA---AKWMKDGQHI 115

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE 388
           AF         +  MK DGS+ + + +
Sbjct: 116 AFLSSETGSMQLWTMKADGSERKQITD 142


>gi|289582194|ref|YP_003480660.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
 gi|289531747|gb|ADD06098.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
          Length = 611

 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 8/140 (5%)

Query: 307 ASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           AS+SP+  +++F  D  G E  QL+ + +     + ++   +A +    WS  GD  AFT
Sbjct: 62  ASWSPERPELIFGMDEGGNERAQLFRLDAETGTIENVTAMPDAKHRWGGWSHDGDQFAFT 121

Query: 365 KFSGEKFAIGVMKKD----GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
               ++    V  +D    G +  L+ E D  L    WSP    L+ S+    +    LY
Sbjct: 122 SNRRDEAVFDVYVQDRDETGDEAALVYEGDGWLSLSGWSPDDSRLLVSQAY-SNFDQDLY 180

Query: 420 SIDLNGRNETLINTPAYASD 439
            +DL     TL +   +  D
Sbjct: 181 VLDLEAEKPTLEHLTPHEGD 200


>gi|298246851|ref|ZP_06970656.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297549510|gb|EFH83376.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 659

 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 13/126 (10%)

Query: 253 IGNFRSMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           I N  S ++AP    +GKRA   V      Q  +   ++ VD        L+     + +
Sbjct: 33  IRNVISAVIAP----DGKRAAFVVREWVPDQPRQRGRVWCVDTAGGDPYPLSTGALDDST 88

Query: 307 ASYSPDSSQIVF--ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S+SPDS Q+ F  +S  E +  L ++ + G + + I         +  WSP G  IAF 
Sbjct: 89  PSWSPDSQQLAFISKSGHEDEALLCIVPAQGGESRTICAMPNG-ISEVNWSPDGSRIAFL 147

Query: 365 KFSGEK 370
              G K
Sbjct: 148 SHDGPK 153


>gi|88802849|ref|ZP_01118376.1| acylaminoacyl-peptidase [Polaribacter irgensii 23-P]
 gi|88781707|gb|EAR12885.1| acylaminoacyl-peptidase [Polaribacter irgensii 23-P]
          Length = 679

 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 55/110 (50%), Gaps = 18/110 (16%)

Query: 310 SPDSSQIVFESDREG--------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           SPD+SQI++   R G        +  L+++ S+GS  ++++  +E +     WSP GD I
Sbjct: 43  SPDASQIIYR--RNGFDIMKDTSRGNLWIINSDGSSNRKLTS-REVNESQAKWSPSGDRI 99

Query: 362 AF---TKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFS 407
           AF   TK   E +   V     ++  +L +   NL   +WSP G  + F+
Sbjct: 100 AFVSGTKEGSEVYMYWVQTGQIAKLSQLEMAPGNL---SWSPDGTQIAFT 146


>gi|294633938|ref|ZP_06712495.1| tat pathway signal sequence domain-containing protein [Streptomyces
           sp. e14]
 gi|292830190|gb|EFF88542.1| tat pathway signal sequence domain-containing protein [Streptomyces
           sp. e14]
          Length = 646

 Score = 40.4 bits (93), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 77/216 (35%), Gaps = 77/216 (35%)

Query: 270 KRALISVQK-DEAMDIYSVDLQSNATERLTNTLFI---------NISASYSPDSSQIVFE 319
           K A +S +  D    I+ +DL++ A   LT T  +         +   S+SPD   I F 
Sbjct: 144 KVAFVSTRSADRRTQIWLLDLRTKALTDLTGTAALAGDPAGPDGHFRPSWSPDGQWIAFS 203

Query: 320 SDRE----------GKEQ-----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           SDR           G E      +YV++ +G+  ++++         P WSP G  I F 
Sbjct: 204 SDRNTVWRGHGNGTGWEHTQELSIYVIRPDGTGFRQVASRDGYCQGSPKWSPDGSRIVFY 263

Query: 365 KFSGE-------------------------------------KFA--------IGVMKKD 379
           + + E                                     K A        IG + K 
Sbjct: 264 ELTVEDTWGAHRPEDIGIAESQIVSVDVASGARTVHTSGPNLKVAPQYVSSTEIGYLVKG 323

Query: 380 GSQERLLVEDS-------NLQAPTWSPSGRSLIFSR 408
           G  E L            +L++P W+P GRS+I+ +
Sbjct: 324 GPDEGLAYVSGTLPSVKRSLRSPVWTPDGRSVIYEK 359


>gi|88803532|ref|ZP_01119057.1| MdsD protein, putative [Polaribacter irgensii 23-P]
 gi|88780544|gb|EAR11724.1| MdsD protein, putative [Polaribacter irgensii 23-P]
          Length = 1060

 Score = 40.4 bits (93), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 18/126 (14%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQGDLIAFTK 365
           S SPD+SQ+ F    +    ++V+       KR  I Q  E+   DP+W+ + + +AFT 
Sbjct: 29  SISPDASQMAFSYHGD----IWVLNFATDQTKRLTIHQGYES---DPIWNSKSNQLAFT- 80

Query: 366 FSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGRSLIFSRK---KDGDTGSKLY 419
            S  + ++ + K D   G  ++L    S      W+ +G S+IFS     K  +  S +Y
Sbjct: 81  -SNRRGSVNIFKTDLNGGIPDQLTYHPSGDMPSHWNANG-SIIFSSNRIFKGTERESSIY 138

Query: 420 SIDLNG 425
           +ID NG
Sbjct: 139 AIDENG 144


>gi|332306167|ref|YP_004434018.1| WD40-like beta Propeller containing protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332173496|gb|AEE22750.1| WD40-like beta Propeller containing protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 692

 Score = 40.4 bits (93), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 51/231 (22%), Positives = 93/231 (40%), Gaps = 57/231 (24%)

Query: 271 RALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           R  + +Q D+   +I+ VD ++     +TN L  + S + SPD S++ + S   G  Q++
Sbjct: 60  RNFMDIQNDKKRGNIWKVD-KNKVMTPVTNGLHADYSPTLSPDESKLAYISTASGSAQIH 118

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---------------SGEKFA-- 372
           +   +     ++++   A   +  WSP G ++AF++F                G K+A  
Sbjct: 119 IKWLDSGQTGQMTRLTGAP-SNLSWSPDGKMLAFSQFVKGTPKSPVSLSGKPEGAKWADS 177

Query: 373 -----------------------IGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFS 407
                                  I V+  +G   R L +         +WS   +S++FS
Sbjct: 178 AIFIDDLFYRADGAGYLPAGNSQIFVLSAEGGTPRQLTQGEFDHGGNISWSSDSKSIVFS 237

Query: 408 --RKKDGD---TGSKLYSIDLNGRNETLI-------NTPAYASDPQWVGFM 446
             R KD D   T   LY ID+   N   +       N P+ + D + + ++
Sbjct: 238 ANRHKDSDLELTDDNLYKIDVATGNMLALTDRLGPDNGPSISPDGKLIAYL 288


>gi|219847169|ref|YP_002461602.1| hypothetical protein Cagg_0218 [Chloroflexus aggregans DSM 9485]
 gi|219541428|gb|ACL23166.1| conserved hypothetical protein [Chloroflexus aggregans DSM 9485]
          Length = 414

 Score = 40.4 bits (93), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 7/149 (4%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           P  + +G R     Q+  A  +  +DL + N  E   +T+   +   +SPDS  + F S+
Sbjct: 75  PALAPDGTRIAYIGQEGNASVLRVIDLTTGNRLELYRSTINPPLYIVWSPDSRSLSFLSN 134

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG--VMKKD 379
           R     L+++ ++GS    +     +S +   W P    +      G  F  G  V  + 
Sbjct: 135 RARGLGLHIVPADGSRPAELVSSSTSSLYL-AWQPDSSSL-LVHIDGSLFEDGRVVTVQP 192

Query: 380 GSQERL--LVEDSNLQAPTWSPSGRSLIF 406
           G Q+ L  L +    QAP WS  G S  +
Sbjct: 193 GRQQPLYELNDPGFFQAPAWSVDGESFFY 221


>gi|198276608|ref|ZP_03209139.1| hypothetical protein BACPLE_02804 [Bacteroides plebeius DSM 17135]
 gi|198270133|gb|EDY94403.1| hypothetical protein BACPLE_02804 [Bacteroides plebeius DSM 17135]
          Length = 1083

 Score = 40.4 bits (93), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S SPD S I F      K  +Y + S G + ++++ +  A    P+WSP G  IAF   
Sbjct: 28  CSISPDGSTIAFCY----KGDIYTVPSTGGNARQLTTNP-AYDTHPIWSPDGQQIAFASA 82

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                 I ++ KDG   + L   S  + P        ++F
Sbjct: 83  RQGSMDIYIVSKDGGVPKRLTTHSGNETPVTFSDATHILF 122



 Score = 38.9 bits (89), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 30/60 (50%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY+V        +LT     +    +SPD  QI F S R+G   +Y++  +G   KR++
Sbjct: 44  DIYTVPSTGGNARQLTTNPAYDTHPIWSPDGQQIAFASARQGSMDIYIVSKDGGVPKRLT 103



 Score = 37.0 bits (84), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 14/108 (12%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NGK     +  D    ++    +   T+++T+T     S  ++PD   IV+ S+R G 
Sbjct: 323 SPNGKEVAFILHGD----VFVTSTEYKTTKQITDTPEQERSIDFAPDGRSIVYASERNGL 378

Query: 326 EQLYVMQSNGSDQKRIS----------QDKEASYFDPVWSPQGDLIAF 363
            Q+Y       ++K  +             + + F P +SP G  IAF
Sbjct: 379 WQIYQSTLTKEEEKLFTYATDIKEEQLTHSQVTSFQPQYSPDGKQIAF 426


>gi|154173809|ref|YP_001408804.1| translocation protein TolB [Campylobacter curvus 525.92]
 gi|112803726|gb|EAU01070.1| protein TolB [Campylobacter curvus 525.92]
          Length = 421

 Score = 40.4 bits (93), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 42/77 (54%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           M++A   S +G + L+++   +  DIY  ++ +    ++TN   I+++ ++    S+IVF
Sbjct: 237 MLIASDVSKDGSKILLTMAPKDQPDIYIYNIATKGLTQITNYPGIDVNGNFVDGDSRIVF 296

Query: 319 ESDREGKEQLYVMQSNG 335
            SDR G   ++   +N 
Sbjct: 297 VSDRLGYPNVFATSANA 313


>gi|115376424|ref|ZP_01463660.1| dipeptidyl peptidase IV [Stigmatella aurantiaca DW4/3-1]
 gi|310823227|ref|YP_003955585.1| peptidase, s9b (dipeptidyl peptidase iv) subfamily [Stigmatella
           aurantiaca DW4/3-1]
 gi|115366556|gb|EAU65555.1| dipeptidyl peptidase IV [Stigmatella aurantiaca DW4/3-1]
 gi|309396299|gb|ADO73758.1| Peptidase, S9B (Dipeptidyl peptidase IV) subfamily [Stigmatella
           aurantiaca DW4/3-1]
          Length = 720

 Score = 40.4 bits (93), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 64/274 (23%), Positives = 102/274 (37%), Gaps = 39/274 (14%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F S  L      V   +   L  ++R    +  L      I  +P+FSP+ ++VAY  
Sbjct: 107 GSFTSYALSRDGQKVLLTLSGKLYAVERGSGKVTQLNAGEGVI--DPQFSPDGKQVAYVR 164

Query: 231 YDDEDILRVYLM---DTRIDRA--PKRIGNFRSMILAP---RFSSNGKRALISVQKDEAM 282
             D D+ RV L    + +I R   P+R      ++      RF+             +A 
Sbjct: 165 --DNDVFRVELATNKERQITRGGTPERTHGLAELVAQEEMYRFTGY-------WWSPDAK 215

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQ 338
            I   +  ++  E+L      N+    SP+     F   R GK     +L+V+   G   
Sbjct: 216 HIAYAEADTSGVEKL------NLVDPASPEQDAQPFAYPRPGKPNAKVRLFVVPVAGGPA 269

Query: 339 KRISQDKEA-SYFDPV-WSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDS---- 390
           K +  D E   Y   V WS  G L      +   E+  +    + G    LLVE      
Sbjct: 270 KEVRWDAEKYPYMATVRWSKGGPLTLLVQNRAQTEEVLLAADPRTGQTRPLLVERDDAWL 329

Query: 391 --NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             N   P W   G   ++S +++G +  +L   D
Sbjct: 330 SLNQDFPEWLEDGSGFLWSTERNGASEVELRRAD 363


>gi|332829130|gb|EGK01794.1| hypothetical protein HMPREF9455_01942 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 1082

 Score = 40.4 bits (93), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 31/67 (46%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY V        ++T     +    +SPDS  I F SDREG   +Y++ + G   +R++
Sbjct: 45  DIYKVSASGGRAMQITTHPGYDTRPVWSPDSKSIAFSSDREGSLDVYLVSAEGGAPQRLT 104

Query: 343 QDKEASY 349
                 Y
Sbjct: 105 THSAGEY 111



 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 47/221 (21%), Positives = 93/221 (42%), Gaps = 24/221 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPR 264
           + PS  +IL+  R      +  +  +    I R ++L D   +R  K++  FR     P 
Sbjct: 167 IDPSGTKILYHDR---KGYEDPWRKHHQSSITRDLWLCDLSGERTYKKLTTFRGEDRNPV 223

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           ++++G+      ++  + +IY   L  +   +LTN     +    S    ++ F  D E 
Sbjct: 224 WAADGQNFYYLSEQSGSFNIYKSGLNVSTPVKLTNLEKHPVRFLSSSKQGKLCFSYDGE- 282

Query: 325 KEQLYVMQSNGSDQK---RISQDKEASYF----------DPVWSPQGDLIAFTKFSGEKF 371
              +Y M      QK   +I+ D + +            +   SP G  +AF    G+ F
Sbjct: 283 ---IYTMNEGQQPQKVNIQIATDNQENKLKYINFSTGAREMAVSPSGKEVAFV-IRGDVF 338

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
              V  + G+  R+       +  ++SP GRS++++ +++G
Sbjct: 339 VASV--EYGTTRRITNTPEQERNVSFSPDGRSVLYAAERNG 377



 Score = 36.6 bits (83), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 17/115 (14%)

Query: 265 FSSNGKRALISVQKDEAM-----DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           FS+  +   +S    E       D++   ++   T R+TNT     + S+SPD   +++ 
Sbjct: 313 FSTGAREMAVSPSGKEVAFVIRGDVFVASVEYGTTRRITNTPEQERNVSFSPDGRSVLYA 372

Query: 320 SDREG-----------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           ++R G           KE    + +    +++++    AS F P++SP G  IA+
Sbjct: 373 AERNGLWNVYQSTLTHKEDESFVYAKDFKEEQLTNSTLAS-FQPLYSPDGKEIAY 426


>gi|113971218|ref|YP_735011.1| transcriptional regulator domain-containing protein [Shewanella sp.
           MR-4]
 gi|113885902|gb|ABI39954.1| transcriptional regulator domain protein [Shewanella sp. MR-4]
          Length = 716

 Score = 40.4 bits (93), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 12/184 (6%)

Query: 265 FSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G+   I+ +  + + DI+  DL S    RLT+ L      S++PDS  +VF ++  
Sbjct: 337 FSPDGRWLAIARRFSNISEDIFIRDLASANETRLTHGLEDIRGLSWTPDSQSLVFATEDS 396

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---KFSGEKFAIGVMKKDG 380
           G    + +    +  + +  D E   +    S +G+L+      +F    F++G     G
Sbjct: 397 GSRNGFTIDIETAHIRPL--DVEGMSYPSSVSDEGELVYHQYRRQFQMAYFSLG-ESVPG 453

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRN-ETLINTPAYAS 438
           S   LL    + + P +SP  + ++F      DTG +++++ D+NG+  E   +  +  +
Sbjct: 454 SLFPLLYSGISHRNPDYSPEAKRIVFV---SSDTGYNEIWTSDINGKKLEQHTHLKSRVA 510

Query: 439 DPQW 442
            P+W
Sbjct: 511 YPRW 514


>gi|333031177|ref|ZP_08459238.1| putative exported aminopeptidase [Bacteroides coprosuis DSM 18011]
 gi|332741774|gb|EGJ72256.1| putative exported aminopeptidase [Bacteroides coprosuis DSM 18011]
          Length = 694

 Score = 40.4 bits (93), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 77/166 (46%), Gaps = 18/166 (10%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFES-DREGKE 326
           GK   IS   D    IY  DL++N T  +T  +   + +  YSPD   I + S +R+G E
Sbjct: 258 GKEYAISTNSD----IYVYDLKNNTTTNITEGMMGYDTNPQYSPDGKYISWLSMERDGYE 313

Query: 327 ----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---KFSGEKFAIGVMKKD 379
               +L+VM     +++ +S+D E++  D  WS     I F      + + +AI V +  
Sbjct: 314 ADQNRLFVMDLASGEKRFMSKDFESNVDDYTWSSDSKSIYFIGVWHATSQMYAIDVEQAK 373

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            SQ    + +      T +  G  LI  ++    +  +++S+ L+G
Sbjct: 374 VSQ----ITEGMHDYATIALCGEGLI-GKRHSLSSADEIFSVSLDG 414


>gi|298244050|ref|ZP_06967857.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297557104|gb|EFH90968.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 646

 Score = 40.4 bits (93), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 32/169 (18%)

Query: 306 SASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIA 362
           S  + PD + + F SDR   G  QLY++ +NG + + ++ ++ +       WSP G  IA
Sbjct: 68  SPQWEPDGNALAFLSDRVERGTAQLYLISANGGEAQALTPRENKRGVVLFAWSPGGGQIA 127

Query: 363 FT-------------------KFSGEKFAIGVMKKDGSQER----LLVEDSNLQAPTWSP 399
           FT                   +  GEK+    ++      R    L+  + ++    W P
Sbjct: 128 FTSVDEPDEEDERREKERDDAQVYGEKWPYARLRLLSLASREVSTLVAGERHVANFAWHP 187

Query: 400 SGRSLIFSRKKDGDTGSKLYS-----IDLNGRNETLINTPAY-ASDPQW 442
            GR L ++  K  +  S +       I L G    ++   AY AS+  W
Sbjct: 188 QGRELAYTTWKTPELNSSVQETVIERISLAGGEPQVVCHFAYGASNLTW 236


>gi|288918628|ref|ZP_06412977.1| serine/threonine protein kinase [Frankia sp. EUN1f]
 gi|288350028|gb|EFC84256.1| serine/threonine protein kinase [Frankia sp. EUN1f]
          Length = 725

 Score = 40.4 bits (93), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 15/174 (8%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           TI+DD   S++ + G F   ++  S +   G+    L V   DG+ +  L  +  Q   +
Sbjct: 528 TIADDARPSLSPD-GKF---VVVRSTTNDQGLPDAGLYVARLDGSKVFRLNTA--QQATD 581

Query: 217 PRFSPNQQKVAYATYDDED-----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P +SP+ +++AY   + E      +  +    +      K  GN  +    P FS +G+R
Sbjct: 582 PAWSPSGERIAYWASESESDRGFIVTILATSTSTPTPLTKGQGNRDA---DPTFSQDGQR 638

Query: 272 ALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
              S Q+ D  ++IY ++   +   R+T     +   +YSPD   +VF  +R G
Sbjct: 639 IAFSRQETDGDLEIYQMNTDGSHVTRVTAEKGQDQDPAYSPDGKWLVFTGERGG 692



 Score = 36.6 bits (83), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 78/206 (37%), Gaps = 65/206 (31%)

Query: 264 RFSSNGKRALISVQKDEAMD---IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           R  S  + AL +V  D + D   +++  L +N T      +  +   S SPD   +V  S
Sbjct: 495 RKESETENALYAVAADGSKDPVKLFTSGLAANLT------IADDARPSLSPDGKFVVVRS 548

Query: 321 DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------- 363
               +      LYV + +GS   R++  ++A+  DP WSP G+ IA+             
Sbjct: 549 TTNDQGLPDAGLYVARLDGSKVFRLNTAQQAT--DPAWSPSGERIAYWASESESDRGFIV 606

Query: 364 -----------------------TKFS--GEKFAIGVMKKDGSQE------------RLL 386
                                    FS  G++ A    + DG  E            R+ 
Sbjct: 607 TILATSTSTPTPLTKGQGNRDADPTFSQDGQRIAFSRQETDGDLEIYQMNTDGSHVTRVT 666

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDG 412
            E    Q P +SP G+ L+F+ ++ G
Sbjct: 667 AEKGQDQDPAYSPDGKWLVFTGERGG 692


>gi|328880701|emb|CCA53940.1| peptidase S9, prolyl oligopeptidase [Streptomyces venezuelae ATCC
           10712]
          Length = 688

 Score = 40.4 bits (93), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S  P   Q+ F  DR+G  QL+     GSD   +         +  WSP G+ IA+T   
Sbjct: 56  SPDPRGEQVAFICDRDGAPQLWA-GPVGSDDAHLLDTGPDHVTEVSWSPSGEWIAYTVAP 114

Query: 368 GEKFAIGVM--KKDGSQERLLV 387
           G      V+  + DGS  R+L 
Sbjct: 115 GGSGHTRVLCVRPDGSDRRVLA 136


>gi|256393088|ref|YP_003114652.1| WD40 domain-containing protein beta Propeller [Catenulispora
           acidiphila DSM 44928]
 gi|256359314|gb|ACU72811.1| WD40 domain protein beta Propeller [Catenulispora acidiphila DSM
           44928]
          Length = 647

 Score = 40.4 bits (93), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 27/132 (20%)

Query: 310 SPDSSQIVFESDREGKE--QLYV--------MQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           SPD +++ F S R      Q++V            G+   +   +    +F P WSP   
Sbjct: 137 SPDGTKLAFMSTRSADHLAQIWVKNLKSEALTNLTGTAALKGGSNSPDGHFRPAWSPDSQ 196

Query: 360 LIAF-----TKFSG----------EKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGR 402
            IAF     T ++G          ++ +I ++K DG+  R +       L +P+WSP G 
Sbjct: 197 WIAFSSDRNTAWTGHGNGTGWEHTQELSIYIIKADGTGFRQVATKPGYCLGSPSWSPDGT 256

Query: 403 SLIFSRKKDGDT 414
            +++ +    DT
Sbjct: 257 RIVYYQLTREDT 268



 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 25/125 (20%)

Query: 270 KRALISVQK-DEAMDIYSVDLQSNATERLTNTLFI---------NISASYSPDSSQIVFE 319
           K A +S +  D    I+  +L+S A   LT T  +         +   ++SPDS  I F 
Sbjct: 142 KLAFMSTRSADHLAQIWVKNLKSEALTNLTGTAALKGGSNSPDGHFRPAWSPDSQWIAFS 201

Query: 320 SDRE----------GKEQ-----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           SDR           G E      +Y+++++G+  ++++         P WSP G  I + 
Sbjct: 202 SDRNTAWTGHGNGTGWEHTQELSIYIIKADGTGFRQVATKPGYCLGSPSWSPDGTRIVYY 261

Query: 365 KFSGE 369
           + + E
Sbjct: 262 QLTRE 266


>gi|262194673|ref|YP_003265882.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262078020|gb|ACY13989.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1626

 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 14/222 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            E +VS  I  S+ + + DG+    +    +  +    FSP+  +V  A+YD    +RV+ 
Sbjct: 1344 ERIVSASIDKSMRIWNADGSGQPLILRGHEDRVSSAGFSPDGDRVVSASYD--KTVRVWN 1401

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D   +    R G++   + + + S +G R L S   D+++ I+++D  S     L    
Sbjct: 1402 ADGSGEAMVLR-GHY-DRVTSAQVSPDGARVL-SASWDKSIRIWNID-GSGRPAILRGHH 1457

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                SA +SPD  +IV  S     + + V +++GS+   + +  E       +SP G  I
Sbjct: 1458 DAVWSARFSPDGERIVSAS---FDKSVRVWRTDGSEPPIVLRGHEDWVMWAEFSPDGRYI 1514

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSG 401
                 S +K  I + + DGS E +++   D+ +    +SP G
Sbjct: 1515 --VSASKDK-TIRIWRSDGSGEPVVLRGHDAWVNKARFSPDG 1553



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 107/265 (40%), Gaps = 54/265 (20%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +VS     +L + + DG+   ++ P  +  +   RFSP+   +  A++D    +R++  D
Sbjct: 1136 IVSASWDTTLRLWNSDGSGHPHVFPGHEDQVTSARFSPDGAHIVSASHD--GTMRLWRSD 1193

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD---------LQSNAT 294
               +  P       S + + RFS +G   LIS   D+++ ++  D            +  
Sbjct: 1194 GTGE--PVVFRGHDSGLTSARFSPDGVH-LISASTDQSVRVWRADGSRPPQVLRGHDDVV 1250

Query: 295  ERLT----NTLFINIS----------------------------ASYSPDSSQIVFESDR 322
            E +        F++ S                            AS+SPD +++V  S  
Sbjct: 1251 ESVALSPDGGYFVSASWDGSIRMWPLAGSGQPLLLDGHTREALSASFSPDGTRLVSSS-- 1308

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               + L V  +NGS Q  + +  EA+ +   +SP G+ I          ++ +   DGS 
Sbjct: 1309 -WDKDLRVHSANGSGQPLVLRGHEAAVWHAEFSPSGERIVSASIDK---SMRIWNADGSG 1364

Query: 383  ERLLV--EDSNLQAPTWSPSGRSLI 405
            + L++   +  + +  +SP G  ++
Sbjct: 1365 QPLILRGHEDRVSSAGFSPDGDRVV 1389


>gi|305665004|ref|YP_003861291.1| protease [Maribacter sp. HTCC2170]
 gi|88707416|gb|EAQ99661.1| protease, putative [Maribacter sp. HTCC2170]
          Length = 1081

 Score = 40.4 bits (93), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 12/148 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNT-LFINISASYSPDSSQIVFES 320
           FSS+GK+  +    DE+ +   V + SN     E +TN    +  +   SPD   + ++ 
Sbjct: 359 FSSDGKK--VYTLSDESGEFEFVSMPSNGVGSHEAITNNGKVLRYAGKPSPDGKWLAYD- 415

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK--K 378
           D  G   ++V+       K+IS  KE   +   WSP    IAF + +    A   +    
Sbjct: 416 DLMG--NMFVLNIATGSSKKIST-KEEGIYSFSWSPDSKWIAFVQVADNTMAQIYLYGLS 472

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            G+   +  + +N   P WSP G+ + F
Sbjct: 473 SGASFPITTDRANSNYPAWSPDGKFIYF 500



 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 8/141 (5%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI++V L      +LT         + SPD   I F +  EG  ++Y M  +G    R +
Sbjct: 51  DIWTVPLSGGLAYKLTTHAEEERYPAISPDGKMIAFSASYEGPTEIYSMPIDGGLPIRWT 110

Query: 343 QDKEASYFDPVWSPQGDLI----AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            + + S  +  W+P G ++    AF      +     +K   +++++ V  S     ++ 
Sbjct: 111 YESDFSRTNG-WTPDGKIVYDTRAFATLPDRQLVTIDIK---TKKKVRVPLSQASEASFD 166

Query: 399 PSGRSLIFSRKKDGDTGSKLY 419
            SG ++ F R  D    +K Y
Sbjct: 167 ASGNTVFFVRPSDHGNVTKRY 187


>gi|255089254|ref|XP_002506549.1| predicted protein [Micromonas sp. RCC299]
 gi|226521821|gb|ACO67807.1| predicted protein [Micromonas sp. RCC299]
          Length = 910

 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 11/109 (10%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLT-----PSRDQILFEPR-----FSPNQQKVAYATYDD 233
           +V G  +  + V+DR G  +R  T     P  D  L   R      + +    A+A YDD
Sbjct: 80  IVLGTKRGVVIVLDRGGNELRRFTDAHRAPVNDVCLDARREWVGSCADDGTCAAHALYDD 139

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           +D        TR+ R     G  RS+ L PRFSS G R  +    D ++
Sbjct: 140 DDA-HASSASTRVVRCEHDAGPVRSIALDPRFSSRGTRRFVRGGDDGSL 187


>gi|88812601|ref|ZP_01127849.1| WD40-like Beta Propeller [Nitrococcus mobilis Nb-231]
 gi|88790195|gb|EAR21314.1| WD40-like Beta Propeller [Nitrococcus mobilis Nb-231]
          Length = 358

 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 33/170 (19%)

Query: 304 NISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           N  A +S D ++++F+S R+G+  + +Y M + G + +R+S  K A+    + +P G  I
Sbjct: 57  NAEAYFSFDGTELIFQSTRDGRACDAIYRMDTEGHNVRRVSSGKGATTCSFI-APNGRSI 115

Query: 362 AF--TKFSGEK------------------FAIGVMKKDGSQERLLVEDSNLQAP-TWSPS 400
            +  T  +GE+                  + I     +G     L +     A   +SP 
Sbjct: 116 IYASTHLAGERCPTKPDRSQGYVWPLYPGYDIFRAGPEGENPARLTDTPGYDAEGVYSPL 175

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAY------ASDPQWV 443
           G  ++F+  + GD   +L+ ++ +G   E L + P Y      + D QW+
Sbjct: 176 GDKIVFTSMRTGDL--ELFMMNPDGSTVEQLTDEPGYDGGAFFSRDGQWL 223



 Score = 40.0 bits (92), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 52/279 (18%), Positives = 106/279 (37%), Gaps = 50/279 (17%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIR------------YLTPSRDQILFE---------P 217
            + +S   G   +++  MD +G N+R            ++ P+   I++          P
Sbjct: 69  LIFQSTRDGRACDAIYRMDTEGHNVRRVSSGKGATTCSFIAPNGRSIIYASTHLAGERCP 128

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
                 Q   +  Y   DI R           P R+ +         +S  G + + +  
Sbjct: 129 TKPDRSQGYVWPLYPGYDIFRA----GPEGENPARLTDTPGYDAEGVYSPLGDKIVFTSM 184

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-------------- 323
           +   ++++ ++   +  E+LT+    +  A +S D   +V+ + R               
Sbjct: 185 RTGDLELFMMNPDGSTVEQLTDEPGYDGGAFFSRDGQWLVWRASRPQDKALEDYRRLLRQ 244

Query: 324 -----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIG 374
                G+ ++Y+M  N     +++ D  A+ F P W P G  I F+      SG  F + 
Sbjct: 245 GLVRPGRLEIYIMNLNERQPIQLT-DNGAANFAPYWHPDGQHIVFSSNMHDPSGRNFDLY 303

Query: 375 VMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           +M  +  + E+L         P +S  G+ L+F+  ++G
Sbjct: 304 LMDVETRALEQLTYYPGFDGFPMFSHDGKKLVFASNRNG 342


>gi|332884026|gb|EGK04306.1| hypothetical protein HMPREF9456_01334 [Dysgonomonas mossii DSM
           22836]
          Length = 698

 Score = 40.4 bits (93), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 69/143 (48%), Gaps = 12/143 (8%)

Query: 310 SPDSSQIVF-------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           SPD S+I++       E ++  KE L+ M  +GSD+K+I+Q  ++   + +W   G  IA
Sbjct: 63  SPDRSKILYGVTYVSIEQNKTNKE-LFTMNVDGSDKKQITQTPKSEN-NAIWVKGGSKIA 120

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYS 420
           F         I  M  DGS  + +   +  +   ++SP G+ +++ +  K G+  +  Y 
Sbjct: 121 FLSSESGSSQIWEMNPDGSGRKQISNIEGGVNGFSYSPDGKRIMYIKNIKFGERTTDRYK 180

Query: 421 IDLNGRNETLINTPAYASDPQWV 443
            DL   +  +I+   Y    +W+
Sbjct: 181 -DLPKASGRIIDDLMYKHWSEWI 202


>gi|320161707|ref|YP_004174932.1| hypothetical protein ANT_23060 [Anaerolinea thermophila UNI-1]
 gi|319995561|dbj|BAJ64332.1| hypothetical protein ANT_23060 [Anaerolinea thermophila UNI-1]
          Length = 451

 Score = 40.4 bits (93), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 37/201 (18%), Positives = 94/201 (46%), Gaps = 27/201 (13%)

Query: 266 SSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVF----- 318
           + +G+  + S   D+  MD++ V    +   ++ +      ++ ++ P  + + +     
Sbjct: 167 APDGETLVYSAYNDQQGMDLWQVRRDGSENRKILDCGADWCLNPAFHPQGTWLAYSRRLA 226

Query: 319 ---ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEKFAIG 374
              +  + G  +++++    +  + IS D   S  +P+W+P G  L+ +   SG    + 
Sbjct: 227 PIQQGAQPGVPRVWLLDLTSNTTQPISPDPNVSGSEPLWAPVGRRLLMWDGLSGGLRGVD 286

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT--GSKLYSIDLNGRN-ETLI 431
           +   +  Q  ++  D  + A TW+P+G++++F+R   G+T   +++Y  D + +  E ++
Sbjct: 287 L---EAQQSIVIPSDMGMSA-TWTPNGKAILFTRMVLGETVAYAEVYRYDWDTQTIERVL 342

Query: 432 NT---------PAYASDPQWV 443
            +         P ++ D QW+
Sbjct: 343 GSSEMPRDYSVPVFSPDGQWM 363


>gi|256396381|ref|YP_003117945.1| cell wall binding repeat 2-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256362607|gb|ACU76104.1| putative cell wall binding repeat 2-containing protein
           [Catenulispora acidiphila DSM 44928]
          Length = 624

 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 5/105 (4%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ES 320
           AP+  +NG   +   + + A  +++ +  +NA  R+ NT       S SP+   I +   
Sbjct: 155 APQGGANGSM-VFQRKTNGATWVWTYNGYTNAAARVANT-NAGTQPSISPNGRTIAYIHE 212

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAF 363
           D  G  Q++ +  +GS+  +++ D +    +  PVWS  G LIAF
Sbjct: 213 DLNGLPQVFTVGVDGSNPTQLTTDAKPLQKNDTPVWSSDGSLIAF 257


>gi|218921784|emb|CAW30773.1| P100-GA [Haemonchus contortus]
          Length = 746

 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 3/83 (3%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DI+ V    N  ++LT+    N  A  SPD   I F S R G  +L+ M ++G++  ++
Sbjct: 535 FDIFMVSKYGNIVKQLTDEPGYNAEAVLSPDGKTIAFTSIRTGDLELWTMNTDGTNLHQV 594

Query: 342 SQDKEASYFDPV-WSPQGDLIAF 363
           +  KE  Y     +SP G  + F
Sbjct: 595 T--KEYGYDGGCFFSPDGKRLVF 615


>gi|298243303|ref|ZP_06967110.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297556357|gb|EFH90221.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 650

 Score = 40.0 bits (92), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 6/66 (9%)

Query: 309 YSPDSSQIVF----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +SPD   + F    E +RE K QLY++ + G   +R+         D  WSP    +AFT
Sbjct: 94  WSPDGRWLAFVGVAEGERE-KSQLYLVDAQGGTPRRVCTMPNG-ILDLEWSPDACCLAFT 151

Query: 365 KFSGEK 370
            F GE+
Sbjct: 152 SFEGEE 157


>gi|284163411|ref|YP_003401690.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haloterrigena turkmenica DSM 5511]
 gi|284013066|gb|ADB59017.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haloterrigena turkmenica DSM 5511]
          Length = 726

 Score = 40.0 bits (92), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 57/115 (49%), Gaps = 8/115 (6%)

Query: 258 SMILAPRFSSNGKRALI-----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + +  PR S + +R        +  +  A  IY+V +  +   + T +  ++    +SPD
Sbjct: 35  THVEEPRLSPSDERVAFVRRTPAADESYAASIYTVPVGGDEAAQFTASDGVDSQPRWSPD 94

Query: 313 SSQIVFESDR-EG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++ F S R EG +EQ++++ ++G + +R++        D  WSP G  + F++
Sbjct: 95  GDRLAFASTRGEGDREQVWLVPTDGGEARRLTS-VVGGIDDLEWSPNGSRLLFSQ 148



 Score = 40.0 bits (92), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 352 PVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR 408
           P WSP GD +AF  T+  G++  + ++  DG + R L      +    WSP+G  L+FS+
Sbjct: 89  PRWSPDGDRLAFASTRGEGDREQVWLVPTDGGEARRLTSVVGGIDDLEWSPNGSRLLFSQ 148

Query: 409 K 409
           +
Sbjct: 149 R 149


>gi|254881548|ref|ZP_05254258.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319642932|ref|ZP_07997568.1| exported peptidase [Bacteroides sp. 3_1_40A]
 gi|254834341|gb|EET14650.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317385480|gb|EFV66423.1| exported peptidase [Bacteroides sp. 3_1_40A]
          Length = 1086

 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y    + + T+++TNT        +SPD   IV+ S+R G  Q+Y       ++K+ +
Sbjct: 336 DVYVTSTEYSTTKQITNTPQQERDIHFSPDGRSIVYASERNGLWQIYQTSLAKKEEKQFA 395

Query: 343 ----------QDKEASYFDPVWSPQGDLIAF 363
                      + + + F P +SP G  +AF
Sbjct: 396 YATDIKEERLTNSDITSFQPQYSPDGKEVAF 426


>gi|237712301|ref|ZP_04542782.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229453622|gb|EEO59343.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 1086

 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y    + + T+++TNT        +SPD   IV+ S+R G  Q+Y       ++K+ +
Sbjct: 336 DVYVTSTEYSTTKQITNTPQQERDIHFSPDGRSIVYASERNGLWQIYQTSLAKKEEKQFA 395

Query: 343 ----------QDKEASYFDPVWSPQGDLIAF 363
                      + + + F P +SP G  +AF
Sbjct: 396 YATNIKEERLTNSDITSFQPQYSPDGKEVAF 426


>gi|237726440|ref|ZP_04556921.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229434966|gb|EEO45043.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 1086

 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y    + + T+++TNT        +SPD   IV+ S+R G  Q+Y       ++K+ +
Sbjct: 336 DVYVTSTEYSTTKQITNTPQQERDIHFSPDGRSIVYASERNGLWQIYQTSLAKKEEKQFA 395

Query: 343 ----------QDKEASYFDPVWSPQGDLIAF 363
                      + + + F P +SP G  +AF
Sbjct: 396 YATDIKEERLTNSDITSFQPQYSPDGKEVAF 426


>gi|265752010|ref|ZP_06087803.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263236802|gb|EEZ22272.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 1086

 Score = 40.0 bits (92), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y    + + T+++TNT        +SPD   IV+ S+R G  Q+Y       ++K+ +
Sbjct: 336 DVYVTSTEYSTTKQITNTPQQERDIHFSPDGRSIVYASERNGLWQIYQTSLAKKEEKQFA 395

Query: 343 ----------QDKEASYFDPVWSPQGDLIAF 363
                      + + + F P +SP G  +AF
Sbjct: 396 YATDIKEERLTNSDITSFQPQYSPDGKEVAF 426


>gi|157376544|ref|YP_001475144.1| peptidase S9 prolyl oligopeptidase [Shewanella sediminis HAW-EB3]
 gi|157318918|gb|ABV38016.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sediminis HAW-EB3]
          Length = 690

 Score = 40.0 bits (92), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 3/75 (4%)

Query: 373 IGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLY--SIDLNGRNET 429
           + +  KDGS +R +  +  L   P +SP  ++L F  K+D D   ++Y   +D  G  + 
Sbjct: 82  LWLFAKDGSNQRPITAEGLLVSEPVFSPDSKTLAFVSKRDKDEAGQVYLLPMDSPGEAQR 141

Query: 430 LINTPAYASDPQWVG 444
           L N P      +WVG
Sbjct: 142 LTNVPGGVKGVKWVG 156



 Score = 37.0 bits (84), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 24/233 (10%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVYLMDTRIDRAPK 251
           L +  +DG+N R +T +   ++ EP FSP+ + +A+ +  D+D   +VYL+        +
Sbjct: 82  LWLFAKDGSNQRPIT-AEGLLVSEPVFSPDSKTLAFVSKRDKDEAGQVYLLPMDSPGEAQ 140

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT----NTL-FINIS 306
           R+ N    +   ++       +  V   +  D  +  L++N  ++++    N L + +  
Sbjct: 141 RLTNVPGGVKGVKWVGEHVYFISRVFPGKNWDEMAEQLRANEDDKVSARQWNALPYSSFD 200

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
                D    VF    +G E   + Q       R SQ   A+ +D   S    LIAF   
Sbjct: 201 HWIEEDRQAHVFRIPAKGGEVEAITQPMNKQLPRSSQ--SAANYDI--SADERLIAFNSN 256

Query: 367 SGEK----------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             E             IG  K +   ++    D+N   PT+SP G++L F+R+
Sbjct: 257 GWENQVDPKVDIFMAKIGSDKVENLTQKNEAPDTN---PTFSPDGKTLAFTRQ 306


>gi|83858949|ref|ZP_00952471.1| dipeptidyl peptidase IV [Oceanicaulis alexandrii HTCC2633]
 gi|83853772|gb|EAP91624.1| dipeptidyl peptidase IV [Oceanicaulis alexandrii HTCC2633]
          Length = 748

 Score = 40.0 bits (92), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 43/186 (23%)

Query: 218 RFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAPKRIGNFRSMILAP------------ 263
           RFSP+ ++V +    D+D  +  ++ MD    R    +    S +LAP            
Sbjct: 54  RFSPDGERVTFLRPKDDDRTVTDLWAMDLSDGRTYMLV---DSAVLAPDERELSEAEIQY 110

Query: 264 ----RFSSNGKRALISVQKDEAM------DIYSVDLQSNATERLTNTLFINISASYSPDS 313
               R S++G  +    +  EA+      D++ VD+ +   ERL  T      A  SPD 
Sbjct: 111 RERARISTSGVVSYDWDETGEAILVPLDGDVFYVDVNTGEAERLMQTEAFETDARVSPDG 170

Query: 314 SQIVFESDRE--------GKEQLYVMQSNGSD------QKRISQDKEASYFDPVWSPQGD 359
           S + F  D+         G+E+   + + G D       + ++Q++ + Y    WSP G 
Sbjct: 171 SYVSFIRDQNLWVHDLETGEER--ALTTEGGDAISWGVAEFVAQEEMSRYTGYWWSPDGR 228

Query: 360 LIAFTK 365
            IA  +
Sbjct: 229 YIAAAR 234


>gi|262403192|ref|ZP_06079752.1| protease-related protein [Vibrio sp. RC586]
 gi|262350691|gb|EEY99824.1| protease-related protein [Vibrio sp. RC586]
          Length = 1084

 Score = 40.0 bits (92), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 81/186 (43%), Gaps = 31/186 (16%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRI 341
           D+Y V L S  T+R+T+T       S+S D  ++V+ S+REG   LY    N G      
Sbjct: 354 DVYVVSLLSGLTQRITDTPEAERDISFSSDGYRLVYASEREGSWNLYQSYVNDGGKSFST 413

Query: 342 SQD--------KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           S D         E+    P++SP    IA+ +    +  + V   +  Q   L+++  L 
Sbjct: 414 SLDIVEEPLLITESDVIQPLYSPNHKRIAYRE---NRNTLKVYDIEQDQTYTLLDEHALY 470

Query: 394 APT-------WSPSGRSLIFSRKK--DGDT------GSKL-YSIDLNGRNETLINTPAYA 437
           +         WSP    L+   +   +GD       GS++  ++  +G  E +   P ++
Sbjct: 471 SYVDADLSYQWSPDSEYLVTRDRAMFNGDIQLLKFDGSEVPLNLSQSGFAEFM---PQFS 527

Query: 438 SDPQWV 443
           +D QWV
Sbjct: 528 ADGQWV 533


>gi|212691269|ref|ZP_03299397.1| hypothetical protein BACDOR_00760 [Bacteroides dorei DSM 17855]
 gi|212666501|gb|EEB27073.1| hypothetical protein BACDOR_00760 [Bacteroides dorei DSM 17855]
          Length = 1086

 Score = 40.0 bits (92), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y    + + T+++TNT        +SPD   IV+ S+R G  Q+Y       ++K+ +
Sbjct: 336 DVYVTSTEYSTTKQITNTPQQERDIHFSPDGRSIVYASERNGLWQIYQTSLAKKEEKQFA 395

Query: 343 ----------QDKEASYFDPVWSPQGDLIAF 363
                      + + + F P +SP G  +AF
Sbjct: 396 YATDIKEERLTNSDITSFQPQYSPDGKEVAF 426


>gi|56459628|ref|YP_154909.1| acylaminoacyl-peptidase [Idiomarina loihiensis L2TR]
 gi|56178638|gb|AAV81360.1| Acylaminoacyl-peptidase [Idiomarina loihiensis L2TR]
          Length = 671

 Score = 40.0 bits (92), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 82/201 (40%), Gaps = 33/201 (16%)

Query: 249 APKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           APK I  GN+R       +   G        KD    IY +     +  +LT+  F +  
Sbjct: 167 APKYIDKGNYR-------YDGGG------YAKDGHQQIYVIPATGGSPRQLTDEEFNHGG 213

Query: 307 A-SYSPDSSQIVFESDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             S+SPDS  I F ++R           ++Y +  +  +   I++ ++     P  SP G
Sbjct: 214 QLSWSPDSKHIFFSANRRDDAFRQPVNSEIYRLTLSTKEITAITE-RDGPDGSPKVSPNG 272

Query: 359 DLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKD 411
           + IAFT +   K +     + VM  DGS   LL    D ++    W      + F+   +
Sbjct: 273 EKIAFTGYDDTKMSFQASNLYVMDLDGSDVELLTGDLDHSVTGFEWDRDSEGVYFTYDNN 332

Query: 412 GDTGSKLYSIDLNGRNETLIN 432
           G    +L   DL+G +  L N
Sbjct: 333 GV--GQLARTDLDGDHTQLTN 351


>gi|77360885|ref|YP_340460.1| peptidase [Pseudoalteromonas haloplanktis TAC125]
 gi|76875796|emb|CAI87017.1| putative peptidase [Pseudoalteromonas haloplanktis TAC125]
          Length = 646

 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 2/79 (2%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           I+   FS +G + L+S  +     +Y V++Q+    RLT+         Y P+  +++F 
Sbjct: 58  IMGSSFSPHGDKILVSSDESGIYSLYEVNVQTGGKTRLTDFTDSTYPIRYFPNDERVLFT 117

Query: 320 SDREGKE--QLYVMQSNGS 336
            D  G E   +YV +++G+
Sbjct: 118 KDTGGNERFHIYVRETDGT 136


>gi|159897319|ref|YP_001543566.1| hypothetical protein Haur_0790 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159890358|gb|ABX03438.1| hypothetical protein Haur_0790 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 343

 Score = 40.0 bits (92), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 79/211 (37%), Gaps = 34/211 (16%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--SYS 310
            G   S  + P  +   K   IS+      D++  DL +    +LTN      S   S +
Sbjct: 16  CGAANSATVTPPAAVAPKLGDISLIISRGGDLWRFDLPAKQWTQLTNEAPNAYSTFPSIA 75

Query: 311 PDSSQIVF----ESDREGKEQLYVMQSNGSDQKRISQDKEASYF---------------- 350
           PD   +V+           EQ +V+  N ++Q  +      S F                
Sbjct: 76  PDGKSVVYSYRPPVPTPSAEQPFVVPVNHANQIAVDGGASKSLFVPDGGKRDGLQIYDSL 135

Query: 351 -DPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQA--------PTWSPS 400
             PVWSP G  + +  +   +F   GV  + GS    +   S +Q         P+ SP 
Sbjct: 136 DTPVWSPDGKTL-YGVYQTLRFDNDGVFLQSGSSIVAIDLASGVQQTLVMTGTFPSVSPD 194

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           GR L F R +DG     LY  DL  + E ++
Sbjct: 195 GRQLAFVRTRDG-IYPTLYLYDLQTKQERVL 224


>gi|313125049|ref|YP_004035313.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Halogeometricum
           borinquense DSM 11551]
 gi|312291414|gb|ADQ65874.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Halogeometricum
           borinquense DSM 11551]
          Length = 719

 Score = 40.0 bits (92), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 11/109 (10%)

Query: 310 SPDSSQIVF----ESDREGKEQ-LYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD +++ F      D E  EQ +YV+ + G SD +R++   E     P WSP GD +AF
Sbjct: 21  SPDGTRVAFVRKEPKDDESYEQTIYVVPAAGDSDPRRLTI-AEGVDSQPRWSPSGDRLAF 79

Query: 364 TKFSG---EKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSR 408
               G   ++  + V+  DG + E++      +    WSP G  + F +
Sbjct: 80  VSTRGADDDRPQLWVLPMDGGEAEQVTDVPGGVSGIEWSPDGTRIAFQQ 128


>gi|308188759|ref|YP_003932890.1| hypothetical protein Pvag_3303 [Pantoea vagans C9-1]
 gi|308059269|gb|ADO11441.1| Uncharacterized protein yidR [Pantoea vagans C9-1]
          Length = 419

 Score = 40.0 bits (92), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 57/125 (45%), Gaps = 11/125 (8%)

Query: 296 RLTNTLFINISASY----SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           RLT++  + +   +    +PD SQI F  +D     QL+ +  NG + ++I++   +   
Sbjct: 286 RLTHSRGVALQPRHWLRTAPDGSQIAFLMADAGAVIQLWTVSPNGGEPRQITELSHSIQS 345

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFS 407
              W P G  IAF     +   +    + G+ +RL     E  +  A  WSP G  + F 
Sbjct: 346 AFSWHPDGQSIAFIC---DNSVMRCEVESGTCQRLTRRTEEAPSGDAVVWSPDGSQIAFM 402

Query: 408 RKKDG 412
           R+ +G
Sbjct: 403 REVNG 407


>gi|157363040|ref|YP_001469807.1| hypothetical protein Tlet_0173 [Thermotoga lettingae TMO]
 gi|157313644|gb|ABV32743.1| conserved hypothetical protein [Thermotoga lettingae TMO]
          Length = 425

 Score = 40.0 bits (92), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 21/160 (13%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSP---DSSQIV 317
           PRFS +GKR L         +IY + L++ +     N + I+   + +Y+P   D   ++
Sbjct: 201 PRFSPDGKRLLFQGSLHGFWNIYVMPLENYS----KNIVLISAGNNPAYNPCWYDDGTVL 256

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQ--GDLIAFTKFSGEKFAIG 374
           +  D E   +L ++ +    +K+I    E  Y F+ V+SP    D I F       F I 
Sbjct: 257 YVQDSEYGNRL-LLSTIAKKRKQI----EIPYPFEMVFSPTVYKDTIYFVGLKESDFGIY 311

Query: 375 VMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDG 412
            +  DG+    +VE++  N   P  SP GR L +S    G
Sbjct: 312 ALTSDGTVT--VVENTVFNEHDPAISPDGRYLAYSCNITG 349



 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           K+    IY++      T  + NT+F     + SPD   + +  +  G   ++V      +
Sbjct: 304 KESDFGIYALTSDGTVT-VVENTVFNEHDPAISPDGRYLAYSCNITGYYTIWVKDLFTQE 362

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +  I+QD     F PV+SP G ++AF+ + G
Sbjct: 363 KWCITQDIPHDAFYPVFSPDGKVVAFSVYEG 393


>gi|326800508|ref|YP_004318327.1| hypothetical protein Sph21_3114 [Sphingobacterium sp. 21]
 gi|326551272|gb|ADZ79657.1| WD40-like beta Propeller containing protein [Sphingobacterium sp.
           21]
          Length = 1043

 Score = 40.0 bits (92), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 4/77 (5%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           IG F ++  +P    +G     S  K+   DIY  DL S +  +LTN  + +   S+S D
Sbjct: 400 IGEFANITWSP----DGNLVAFSGLKNGYSDIYLYDLSSKSLTQLTNDWYSDYHPSFSRD 455

Query: 313 SSQIVFESDREGKEQLY 329
             +IVF +DR   E  Y
Sbjct: 456 GKKIVFSTDRLSLESGY 472



 Score = 37.4 bits (85), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 16/190 (8%)

Query: 234 EDILRVYLMDT-RIDRAPKRIGNFR--SMILAPRFSSNGKRALISVQKDE-AMDIYSVDL 289
           E+  +  L+DT ++ R    I N    +M ++P  S +GK      +KD  ++D++  D 
Sbjct: 273 ENAYKPLLIDTAQVPRGQMIINNKNGGNMNVSPTISPDGKYVAFLSEKDLFSIDLFLADA 332

Query: 290 QSNA-----TERLTNTL-----FINISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQ 338
            +       + R  N+      +I  + S+S DS +  F    +G+ +L ++   NG   
Sbjct: 333 GTGKIIRKLSSRQNNSHIDEFSYIESAGSFSHDSKKFAFSVFSQGRTKLLIVDVENGKTL 392

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTW 397
              S      + +  WSP G+L+AF+        I +          L  D  +   P++
Sbjct: 393 ATESMGDIGEFANITWSPDGNLVAFSGLKNGYSDIYLYDLSSKSLTQLTNDWYSDYHPSF 452

Query: 398 SPSGRSLIFS 407
           S  G+ ++FS
Sbjct: 453 SRDGKKIVFS 462


>gi|83945669|ref|ZP_00958014.1| Acylaminoacyl-peptidase [Oceanicaulis alexandrii HTCC2633]
 gi|83850870|gb|EAP88730.1| Acylaminoacyl-peptidase [Oceanicaulis alexandrii HTCC2633]
          Length = 682

 Score = 40.0 bits (92), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 21/94 (22%)

Query: 336 SDQKRISQDKEASYFD------PVWSPQGDLIAFTK---------FSGEKFAIGVMKKDG 380
           S Q+R    +   YFD      P  +P G+ I +T+         F+ E +A   M  DG
Sbjct: 19  SAQERPDTLQLEHYFDWEQAGSPQIAPDGEDIVYTRTRVDAVNDGFASELWA---MDSDG 75

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            + R L   S+ Q   WSP GR L F R  DG T
Sbjct: 76  ERHRFLTRGSSAQ---WSPDGRRLAFIRGVDGHT 106



 Score = 37.0 bits (84), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 13/109 (11%)

Query: 306 SASYSPDSSQIVFESDR-----EG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S   +PD   IV+   R     +G   +L+ M S+G   + +++   A      WSP G 
Sbjct: 40  SPQIAPDGEDIVYTRTRVDAVNDGFASELWAMDSDGERHRFLTRGSSAQ-----WSPDGR 94

Query: 360 LIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +AF +      +  +  M  +G++ ++  E   ++   WSP G S+ F
Sbjct: 95  RLAFIRGVDGHTQLFVRWMDAEGAESQITHEQLTIKQFRWSPDGESIAF 143


>gi|309790238|ref|ZP_07684808.1| WD-40 repeat-containing protein [Oscillochloris trichoides DG6]
 gi|308227702|gb|EFO81360.1| WD-40 repeat-containing protein [Oscillochloris trichoides DG6]
          Length = 635

 Score = 40.0 bits (92), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 4/110 (3%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           RL N   ++    +   ++++ +  D  G+EQ ++ + + +    I        +   WS
Sbjct: 514 RLANGRLVDELRRHKNWAAKLAWHPDGSGEEQPWLWRVSDTSLCLIVTGHRNYVYCVAWS 573

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSL 404
           P G ++A     G    + + + DGS   LL+  S+ +QA  WSP G SL
Sbjct: 574 PDGQVLASC---GADSTLRLWRNDGSPISLLMGHSDWVQAVAWSPDGNSL 620


>gi|116623034|ref|YP_825190.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226196|gb|ABJ84905.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 866

 Score = 40.0 bits (92), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 49/236 (20%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---EDILRVYLMDTRI- 246
           ++L  +DR GA        RD     PR SP+ +K+A A   D    DI R  L  TRI 
Sbjct: 594 STLVWVDRKGAEESAGPAPRD--YSTPRVSPDGRKLAVAADSDIWVYDIPRGTL--TRIT 649

Query: 247 ----DRAP------KRI--------------GNFRSMIL-------APRFSSNGKRAL-- 273
               +R+P      KRI              G+  +  L          ++ +GKR L  
Sbjct: 650 FSGDNRSPVWTPDGKRITYVANGKISWSLLDGSAHAETLWNGAFGLPTSWAPDGKRLLFT 709

Query: 274 -ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +       + I SV+ +   +  L  + F    A++SPD  ++ + SD   + ++YV +
Sbjct: 710 QLGTSNHTDVSILSVEGERKVSPIL-QSRFRAGQAAFSPDGRRMAYTSDESARPEIYVQE 768

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             G   K   Q       DPVW  QG  + F +  G+  A+ +   +    R+L E
Sbjct: 769 FPGPGGK--VQVSSQGGLDPVWGRQGREL-FYRSGGKMMAVDI---EAGTARVLFE 818


>gi|120436552|ref|YP_862238.1| secreted prolyl oligopeptidase family protein [Gramella forsetii
           KT0803]
 gi|117578702|emb|CAL67171.1| secreted prolyl oligopeptidase family protein [Gramella forsetii
           KT0803]
          Length = 634

 Score = 40.0 bits (92), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 89/190 (46%), Gaps = 16/190 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFES 320
           FS+N  + LIS  +    ++Y +++   + + +T +    LF   +  Y P+SS I++ +
Sbjct: 42  FSANESKLLISNDESGIFNLYEINISDGSQKAITTSDQESLF---AVDYVPNSSDILYSA 98

Query: 321 DREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVM 376
           D+ G E   LY+++ +G+ ++  + + E   F   WS     + +   K   + F +  M
Sbjct: 99  DKGGNEISHLYLLKPDGTSKELTTGENEKVNF-AGWSTDKSTMYYLSNKRDPQFFDLYKM 157

Query: 377 KKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +    +  +L E++        S SG+ LI S K    + +KL+ ++      T I+ P 
Sbjct: 158 EIGKWEPNMLYENNEGYSVSEVSSSGKFLILS-KPITTSENKLFLLNRESEEMTEISKPG 216

Query: 436 YASDPQWVGF 445
           +   P   GF
Sbjct: 217 FNYSP--TGF 224


>gi|294142361|ref|YP_003558339.1| hypothetical protein SVI_3590 [Shewanella violacea DSS12]
 gi|293328830|dbj|BAJ03561.1| hypothetical protein [Shewanella violacea DSS12]
          Length = 733

 Score = 40.0 bits (92), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 69/156 (44%), Gaps = 11/156 (7%)

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV-MQSNGSDQKRISQDKEAS 348
           Q+   +RLT       S   SPD   + F     G++   + M    S      +D   S
Sbjct: 179 QNTELKRLTFLDGQEFSPVLSPDGKYLAFSQRDLGEKNWRIGMMEIESRLVVYLEDPMDS 238

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKD----GSQERLLVEDSNLQAPT--WSPSG 401
              P +SP G  IA+  ++ +    I V+ K     G  +++      LQ+ +  W+PSG
Sbjct: 239 QGYPAFSPDGSRIAYLSYNNDGGCKINVVDKHSRTFGKIQKITDCKRKLQSTSIAWNPSG 298

Query: 402 RSLIF---SRKKDGDTGSKLYSIDLNGRNETLINTP 434
           +SL +    ++ D  T  K++S+ LNG N+  I  P
Sbjct: 299 QSLFYIDEDQQHDYHTEKKVFSVSLNGNNKQQITQP 334


>gi|116331809|ref|YP_801527.1| Tol transport system component [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116125498|gb|ABJ76769.1| Tol transport system component [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 2587

 Score = 40.0 bits (92), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)

Query: 262 APRFSSNGKRAL-ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +P +SS+GK  + +S Q++ + D+Y +DL S  +ERLT   ++N S S S D   + + S
Sbjct: 217 SPVWSSDGKSIVYLSYQENPSGDVYLLDLMSGKSERLTKDSYLNFSPSLSDDKRYLYYTS 276


>gi|116327580|ref|YP_797300.1| Tol transport system component [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116120324|gb|ABJ78367.1| Tol transport system component [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 2587

 Score = 40.0 bits (92), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)

Query: 262 APRFSSNGKRAL-ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +P +SS+GK  + +S Q++ + D+Y +DL S  +ERLT   ++N S S S D   + + S
Sbjct: 217 SPVWSSDGKSIVYLSYQENPSGDVYLLDLMSGKSERLTKDSYLNFSPSLSDDKRYLYYTS 276


>gi|116626377|ref|YP_828533.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229539|gb|ABJ88248.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 750

 Score = 40.0 bits (92), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 9/92 (9%)

Query: 276 VQKDEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFES--------DREGKE 326
           V + E  ++Y++DL+  N    +T   + + +A YSPD   IVF S        DR  + 
Sbjct: 240 VHEMEIAELYTIDLERDNKATAITRDFYNHSAAQYSPDGRTIVFTSTPAVADHPDRLRRS 299

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            ++ M ++G++   + + K+ S+ +P ++  G
Sbjct: 300 AVWTMTADGANPHVLLERKDYSFSNPRFTSDG 331


>gi|325103940|ref|YP_004273594.1| WD40-like beta Propeller containing protein [Pedobacter saltans DSM
           12145]
 gi|324972788|gb|ADY51772.1| WD40-like beta Propeller containing protein [Pedobacter saltans DSM
           12145]
          Length = 1053

 Score = 40.0 bits (92), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 4/79 (5%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T +++A   +  F ++  +P    NGK    +  ++   DI+S +L +    +LTN  + 
Sbjct: 393 TLLEKAMGEVEQFGNITWSP----NGKDLAFTGLQNGQSDIFSYNLDTQQITQLTNDKYT 448

Query: 304 NISASYSPDSSQIVFESDR 322
           +   SYS D  +IVF +DR
Sbjct: 449 DFQPSYSTDGKKIVFSTDR 467



 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 91/204 (44%), Gaps = 30/204 (14%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI--------NISASYSPDSSQIVFESD 321
           +R L S+ K    + Y   L+ +A  +   T  I        N++ + SPD   + F S+
Sbjct: 262 ERTLSSLWKSALENTYRPLLKDSAQTKPIGTKLIDNVNGGEMNVAPAISPDGKYLAFLSE 321

Query: 322 RE-GKEQLYVMQS-NGSDQKRISQDKEASYFDP--------VWSPQGDLIAFTKFSGEKF 371
           ++     LY+  +  G   ++++   + S+ D          WSP     AF+ FS  + 
Sbjct: 322 KDLFSIDLYLADAKTGKIIRKLTSRIKNSHIDEFNFIESAGAWSPDSKQFAFSAFSKGRN 381

Query: 372 AIGVMKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            + ++  +  +   E+ + E       TWSP+G+ L F+  ++G   S ++S +L+ +  
Sbjct: 382 QLVIVDIESGRTLLEKAMGEVEQFGNITWSPNGKDLAFTGLQNGQ--SDIFSYNLDTQQI 439

Query: 429 TLINT-------PAYASDPQWVGF 445
           T +         P+Y++D + + F
Sbjct: 440 TQLTNDKYTDFQPSYSTDGKKIVF 463


>gi|262196214|ref|YP_003267423.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262079561|gb|ACY15530.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1267

 Score = 40.0 bits (92), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 106/235 (45%), Gaps = 19/235 (8%)

Query: 211  DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            D ++    FSP+  K+  A+  D+  +RV+  D   +  P        ++ A  FS +G+
Sbjct: 848  DGVVRSAVFSPDGSKIVSAS--DDRTVRVWNADGSGE--PLVFHGHSDVVTAVDFSPDGR 903

Query: 271  RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            R ++S   D  + +++ D          +T  +  S  +SPD   I   S+      + +
Sbjct: 904  R-IVSSDWDRTVRVWNADGSGTPMVLRGHTAAVT-SVHFSPDGRFIASSSE---DRTVRI 958

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--E 388
              ++GS Q RI    +A+  D  +SP G  I     SG+  ++ + K     E L++   
Sbjct: 959  WHADGSGQPRILSGHDAAVMDVRFSPDGRYI--VSASGDA-SVRLWKAVRDAEPLVLRGH 1015

Query: 389  DSNLQAPTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            +  + +  +SP GR ++ + +    +  D  S+   + L G  E++++  A++ D
Sbjct: 1016 EHVVTSADFSPDGRRVVSTSEDQTVRVWDVASRSEPLVLRGHEESVMSA-AFSPD 1069


>gi|109947174|ref|YP_664402.1| translocation protein TolB [Helicobacter acinonychis str. Sheeba]
 gi|109714395|emb|CAJ99403.1| tolB protein [Helicobacter acinonychis str. Sheeba]
          Length = 417

 Score = 40.0 bits (92), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 71/372 (19%), Positives = 153/372 (41%), Gaps = 30/372 (8%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           K+ EV+  DL+ S  F+ +S++  +  I        + D  +   Q++    V  E  ++
Sbjct: 48  KLHEVLINDLKTSQHFD-VSENKEQSAIN-------YADLKNKKFQLVALVSVAVENGNK 99

Query: 124 LRVEFRLWDVKDRKQIIGKKF---FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
           +    RL+DV      + K F     S   +   AH ++  +   +      +  R +  
Sbjct: 100 IS-RLRLYDV--NTSTLTKTFDYPILSADLYPFTAHNMAIAVNDYLKAPSIAWMKRFIVF 156

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S+ + SG+   S+ + D      + +  +    +F    +  Q +  Y  Y +   +   
Sbjct: 157 SKYISSGV--TSIALADYTMRYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERKPM--- 211

Query: 241 LMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           ++   I +   + I + + M +    SS+G + L+S+      D+Y  D+    + ++T 
Sbjct: 212 ILKYNIQKGTHQSIASSQGMAVVSSVSSDGSKILMSLAPKGQPDVYLYDVHKKTSTKITR 271

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDP----- 352
              I++S  +  D   + F SDR G   +Y+  +  N S ++ + + K     D      
Sbjct: 272 YPGIDVSGVFLEDDKSMAFVSDRSGYPNIYMKKLGLNESAEQLVYEGKSNESIDAYKDGI 331

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           V+  + +L    +F    F + ++  +    R L  +   Q P +S  G+++++ +K   
Sbjct: 332 VYVSRENL---NEFGKTVFNLNLITLNSKYIRRLTVNGVNQMPRFSVDGKNIMYIKKTPQ 388

Query: 413 DTGSKLYSIDLN 424
           +    L  +D N
Sbjct: 389 EYAMGLILLDYN 400


>gi|51892847|ref|YP_075538.1| hypothetical protein STH1709 [Symbiobacterium thermophilum IAM
           14863]
 gi|51856536|dbj|BAD40694.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 341

 Score = 39.7 bits (91), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 63/168 (37%), Gaps = 29/168 (17%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT T  ++  A +SPD  +I F  D     Q+ +    G   + ++    A    PVW P
Sbjct: 67  LTQTAAMDGFAVWSPDGREIAFMRD----GQILLTTPQGRPVRVLTTQPGAWDAGPVWRP 122

Query: 357 QGDLIAFTKFSGEKFAIGVM--------KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            G  +AF + S       VM          DG    L  E   +    W  SG  L ++ 
Sbjct: 123 DGRALAFVRLSTRDGGAQVMLLPVPPGNAPDGKPVALTSEPGAIGYLAWDHSGDRLYYT- 181

Query: 409 KKDGDTGSKLYSIDL-NGRNETLINTP----------AYASDPQWVGF 445
                T  ++  I + +GR E +   P          A A D +W+ F
Sbjct: 182 -----TNDRIVRIAVPSGRKEEIFRAPEGWELISGGLAVAQDGRWLLF 224



 Score = 36.6 bits (83), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 6/96 (6%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKK 410
           VWSP G  IAF +  G+   I +    G   R+L          P W P GR+L F R  
Sbjct: 78  VWSPDGREIAFMR-DGQ---ILLTTPQGRPVRVLTTQPGAWDAGPVWRPDGRALAFVRLS 133

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
             D G+++  + +   N       A  S+P  +G++
Sbjct: 134 TRDGGAQVMLLPVPPGNAPDGKPVALTSEPGAIGYL 169


>gi|58040002|ref|YP_191966.1| Tricorn protease-like protein [Gluconobacter oxydans 621H]
 gi|58002416|gb|AAW61310.1| Tricorn protease homolog [Gluconobacter oxydans 621H]
          Length = 1089

 Score = 39.7 bits (91), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 18/168 (10%)

Query: 284 IYSVDLQSNATERLTNTL----FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++SV L     +RLT        I+     SPD +QI F ++ +G  ++YVM  +G   +
Sbjct: 33  VWSVPLAGGQAQRLTTVPQGANAIDPHPVISPDGTQIAFAANFDGPTEIYVMPRSGGTPR 92

Query: 340 RISQDKEASYFDPVWSPQ-GDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTW 397
           R++ +  A      W    G L A    +G  +   V   D  +  + +   S +     
Sbjct: 93  RLTFENVARLKIIGWDAHAGILYAAPAATGPYYTQTVTAIDPKTSAKHVFPLSGVNDAAL 152

Query: 398 SPSGRSLIFSRKKDGDTG-----------SKLYSIDL-NGRNETLINT 433
           SP GR L   R     TG           S+L+  DL NG+    I T
Sbjct: 153 SPDGRWLYAVRFGLATTGDHMRAYRGGALSQLWRFDLQNGKEAERIGT 200


>gi|319786426|ref|YP_004145901.1| WD40-like beta Propeller containing protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317464938|gb|ADV26670.1| WD40-like beta Propeller containing protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 697

 Score = 39.7 bits (91), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 82/221 (37%), Gaps = 36/221 (16%)

Query: 217 PRFSPNQQKVAYATYD-DEDI------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           P  SP+  +V +A  +  ED+      L +  + TR    PKR+      + +P FS++G
Sbjct: 43  PVLSPDGARVVFARREIGEDLGKASTGLWIRDLRTRDLAPPKRLTPEGWSVNSPSFSADG 102

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           K       K  +  +YS+ +      +LT       S   SPD  +I    D        
Sbjct: 103 KSVYFLSAKGGSQQLYSIPVAGGEPRQLTRYPLDIGSYKVSPDGKRIAVSMD-------- 154

Query: 330 VMQSNGSD--------QKRISQDKEASYFDPV----WSPQGD-----LIAFTKFSGEKFA 372
           V    G+D         KR         +D +    W    D     L   T  SG+K  
Sbjct: 155 VFTDCGADLDCTVSRLDKREKSKASGVVYDQLFVRHWDTWADGRHSRLFVTTPASGDKAP 214

Query: 373 IGVMKKDGSQERLLVEDS----NLQAPTWSPSGRSLIFSRK 409
             V+   G  E +    S         TWSP G+SL+FS +
Sbjct: 215 APVLVGAGRNEPVGHVPSRPFGGSDEYTWSPDGKSLVFSMR 255


>gi|255038055|ref|YP_003088676.1| hypothetical protein Dfer_4309 [Dyadobacter fermentans DSM 18053]
 gi|254950811|gb|ACT95511.1| conserved hypothetical protein [Dyadobacter fermentans DSM 18053]
          Length = 460

 Score = 39.7 bits (91), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 9/118 (7%)

Query: 310 SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD SQ+ F   D +G  Q++ +   G   +++++       +  W P G  +++  + G
Sbjct: 338 SPDGSQLAFLAKDAKGVSQIFTISPLGGKPRQVTECTSDVTGNLRWHPDGKHVSYV-YEG 396

Query: 369 EKFAIGVMKKDGS-QERL--LVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 V   DG  +ER+  L E S        WSP G+ L F+R    DTG  +  +
Sbjct: 397 SIVLCEV--GDGPFRERIQVLTEPSEFATSNLVWSPDGKVLAFNRLVKNDTGKAMQQV 452


>gi|16331616|ref|NP_442344.1| hypothetical protein slr0195 [Synechocystis sp. PCC 6803]
 gi|1001679|dbj|BAA10414.1| slr0195 [Synechocystis sp. PCC 6803]
          Length = 183

 Score = 39.7 bits (91), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 3/100 (3%)

Query: 284 IYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           IY  +LQ+N  E L     ++  AS+   + D   IVF   R+GK  + +       ++ 
Sbjct: 78  IYLYNLQNNRLETLPRLNALDQVASHPTITEDGRYIVFALSRQGKTDIVLYDRQTEQKRN 137

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           ++ D  A   +PV +  GD IAF      ++ I VM   G
Sbjct: 138 LTADLAADTRNPVINANGDRIAFEVAQDGQWDIMVMDAQG 177


>gi|119503812|ref|ZP_01625894.1| hypothetical protein MGP2080_01776 [marine gamma proteobacterium
           HTCC2080]
 gi|119460320|gb|EAW41413.1| hypothetical protein MGP2080_01776 [marine gamma proteobacterium
           HTCC2080]
          Length = 665

 Score = 39.7 bits (91), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 23/159 (14%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES------DREGKEQLYVMQSNG-- 335
           +Y +D+ +  T +LT   F +   S+SPD   I F S      DR    +L+++ +    
Sbjct: 187 LYVIDVATQKTRQLTFGDFDDSQPSWSPDGKHIAFVSNRTEHPDRNRNTELWLLDTTAGP 246

Query: 336 SDQKRISQD--KEASYFDPVWSPQGDLIAFTKFSGEKFAI------GVMKKDGSQERLLV 387
           S+ ++++ +  ++AS   P WSP    +A+T  + E   I       ++  +  + +L+ 
Sbjct: 247 SEPRQLTFNSFQDAS---PTWSPDSKHLAYTTAASEDLPIYAIPQLAILNIESGESQLVA 303

Query: 388 EDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             S +Q   P +S +G  L+   +  G    +L  +DL+
Sbjct: 304 SLSEVQVFNPVFSANGNDLLTITEFQGQ--QQLVRVDLD 340


>gi|326515644|dbj|BAK07068.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 733

 Score = 39.7 bits (91), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 20/121 (16%)

Query: 275 SVQKDEAMDIYSVDLQSNA-----TERLTNTLFINISASYSPDSSQIVFESDREG----K 325
           S    + ++IY++   S        ERLT+  F N   S +PD ++ VF S R+G     
Sbjct: 477 SFSAGKPLEIYAISNVSGPRGGRKVERLTDGHFNNAFPSSNPDGTKFVFRSTRDGGAELH 536

Query: 326 EQLYVMQ-------SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           + LY+M+       S G+ ++  +     ++    WSP+ D I F+  S    A G  K+
Sbjct: 537 KNLYIMEDAEVGEFSEGTVRRLTNGPWTDTHCS--WSPKNDWIVFS--SSRDKAAGAPKR 592

Query: 379 D 379
           D
Sbjct: 593 D 593


>gi|322830739|ref|YP_004210766.1| hypothetical protein Rahaq_0006 [Rahnella sp. Y9602]
 gi|321165940|gb|ADW71639.1| hypothetical protein Rahaq_0006 [Rahnella sp. Y9602]
          Length = 420

 Score = 39.7 bits (91), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 11/142 (7%)

Query: 200 GANIRYLTPSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           G   R +T + + I  +PR     SP+  K+A+   D+  +++V+ +      AP +I +
Sbjct: 283 GVKQRRITFTENGIALQPRHWLRVSPDGAKIAFLMQDETGVVQVWTVSPN-GGAPAQISH 341

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPD 312
             S I +    S   ++L  V  +  M +   D++S   +RLT          +  YSPD
Sbjct: 342 SESGIQSAFSWSQDGKSLALVCDNSVMRL---DMESGKMQRLTQRSENAPCADAVVYSPD 398

Query: 313 SSQIVFESDREGKEQLYVMQSN 334
            S++ F     G  Q+ V  S+
Sbjct: 399 GSKVAFMRQCNGYAQICVADSD 420


>gi|226226779|ref|YP_002760885.1| putative S9C family peptidase [Gemmatimonas aurantiaca T-27]
 gi|226089970|dbj|BAH38415.1| putative S9C family peptidase [Gemmatimonas aurantiaca T-27]
          Length = 760

 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 18/141 (12%)

Query: 278 KDEA----MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--ESDREGKEQLYVM 331
           +DEA     DIY +D       +LT+ +      ++SPD  QI F     R     +YV+
Sbjct: 322 RDEAERNDADIYIIDANGGTPRKLTDWMGAESQITWSPDGKQIAFIGRPGRTKNSNIYVV 381

Query: 332 QSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE- 388
            + G   + +  +   E   FD  W P G  I FT   G + A  V++ D S + L  E 
Sbjct: 382 DAAGGTPRALLGNWQYEPGNFD--WLPGG--IQFTAEIGGRSA--VLRADMSGKSLPTEL 435

Query: 389 ---DSNLQAPTWSPSGRSLIF 406
                 L+  ++  SG++L +
Sbjct: 436 VSGRRQLRGASYDESGKTLAY 456


>gi|197105058|ref|YP_002130435.1| hypothetical protein PHZ_c1595 [Phenylobacterium zucineum HLK1]
 gi|196478478|gb|ACG78006.1| hypothetical protein PHZ_c1595 [Phenylobacterium zucineum HLK1]
          Length = 855

 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 58/285 (20%), Positives = 115/285 (40%), Gaps = 53/285 (18%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF--EPRFSPNQQKVAYAT 230
            ++R L V+++   G +   L  +D     +R LT      L   EP+ SP+ ++VA+  
Sbjct: 436 LDARTLVVADTPAGGGLPR-LSAIDATTGEVRALTAPPPDTLGDNEPQASPDGRQVAFRR 494

Query: 231 YDDEDILRVYLMDTRI--DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                   + ++D R   +R   R G   +  +   +S +G+  L +  +   + ++ +D
Sbjct: 495 TLRFGADEIVVLDVRTGRERTLTRDGWKAAGYV---WSPDGRNLLFASNRGGGLGLWRLD 551

Query: 289 LQSNA-TERLTNTL----FINISA----------------------SYSPDS-------- 313
            +  A  E+++  L    F+++SA                      S +P++        
Sbjct: 552 ARRPAEPEQVSLGLGVVSFLHMSADRTGQAVVEIARPRSGLVRLGPSGAPEARIVTASND 611

Query: 314 --------SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
                     +   SDR G   L++  + G    R+++   +    P WS  G  +AF  
Sbjct: 612 WDPVTGPDGAVAHISDRAGAPDLWI-SAPGGGATRLTEGLGSYVSSPAWSGDGRSLAFIA 670

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRK 409
             G +  I  + +DGS+   L +D  + ++P + P GR     R+
Sbjct: 671 VIGRQADIFTVGRDGSRLLRLTDDGRDKRSPVFGPRGRVYYVERR 715


>gi|291568164|dbj|BAI90436.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 1179

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 106/233 (45%), Gaps = 31/233 (13%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQK 278
            SP+ + VA  ++D+   +R++ M+  +    K I N  SM +    FS NG+  + SV  
Sbjct: 917  SPDGEIVATGSWDES--IRLWNMEGEL---LKVINNAHSMGVNQLAFSPNGE-VIASVGN 970

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D+      V L S   E +    +  +    ++SPD   +V  S+ +    +Y+   +GS
Sbjct: 971  DK-----KVKLWSRVGEFIREWEYSEVITGVAFSPDGKMVVTGSEDKEVRVVYI---DGS 1022

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
              + I  + + S +   +SPQGD+IA          + +   DG +  +L     +    
Sbjct: 1023 GTRLIG-NHQGSVWGVAFSPQGDIIASASTDN---TVRLWFLDGRKSIVLHHQGIVDHVA 1078

Query: 397  WSPSGRSLIFSRKKDG------DTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +SP G  +I S   DG      + G KL ++    R++    T A+++D +W+
Sbjct: 1079 FSPDGE-MIASASWDGTIQLWTNEGVKLKTLI---RHQGPARTVAFSNDGKWI 1127


>gi|310641988|ref|YP_003946746.1| peptidase s9 prolyl oligopeptidase active site domain protein
           [Paenibacillus polymyxa SC2]
 gi|309246938|gb|ADO56505.1| Peptidase S9 prolyl oligopeptidase active site domain protein
           [Paenibacillus polymyxa SC2]
          Length = 675

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 22/141 (15%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD SQ+ F    +GK Q++++ + G + ++++   E +     WSP G  I+F   + 
Sbjct: 78  WSPDGSQLAFLRSTDGKRQVWIIPARGGEARQLTH-VENNVRSLSWSPDGAYISFVAKTA 136

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-KKDG-----DTGSKLYSID 422
           E  +       G QE  L              GR +  ++ K DG     DT   LY  D
Sbjct: 137 ENQSSSTCDV-GEQETHL-------------EGRVVNRTKAKSDGYGLWDDTRDHLYVTD 182

Query: 423 LNGRNETLINTPAY-ASDPQW 442
           +   +   + + AY  ++P W
Sbjct: 183 VTSGHTVQLTSGAYDVAEPVW 203



 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
           PVWSP G  +AF + +  K  + ++   G + R L   ++N+++ +WSP G  + F  K
Sbjct: 76  PVWSPDGSQLAFLRSTDGKRQVWIIPARGGEARQLTHVENNVRSLSWSPDGAYISFVAK 134


>gi|302867847|ref|YP_003836484.1| hypothetical protein Micau_3380 [Micromonospora aurantiaca ATCC
           27029]
 gi|315505751|ref|YP_004084638.1| hypothetical protein ML5_5014 [Micromonospora sp. L5]
 gi|302570706|gb|ADL46908.1| hypothetical protein Micau_3380 [Micromonospora aurantiaca ATCC
           27029]
 gi|315412370|gb|ADU10487.1| hypothetical protein ML5_5014 [Micromonospora sp. L5]
          Length = 320

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 56/134 (41%), Gaps = 8/134 (5%)

Query: 307 ASYSPDSSQIVF-ESDREGKEQL--YVM---QSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           A  SPD   + +  + R G   L  YV    +  G  +  ++      Y  P WSP G  
Sbjct: 74  AKASPDGRYVAWVNTARSGDGTLEPYVAVYDRVTGQKRTLLADPFGVRYGAPTWSPDGTE 133

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IA     G    I V    G+  R+LVE  +++ P WS  G S+I  R +    G +L  
Sbjct: 134 IALVTGQGNDRLIAVDVVTGAT-RVLVEGHSMRDPDWSRDG-SMIVVRWRSRSQGWQLRV 191

Query: 421 IDLNGRNETLINTP 434
           ++L       I TP
Sbjct: 192 LELATGTVRPIYTP 205


>gi|145640335|ref|ZP_01795919.1| translocation protein TolB precursor [Haemophilus influenzae R3021]
 gi|145274921|gb|EDK14783.1| translocation protein TolB precursor [Haemophilus influenzae
           22.4-21]
          Length = 143

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 54/139 (38%), Gaps = 36/139 (25%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS--------DQKRISQDKE-- 346
           +T+    N   ++SPD + I+F SDR G  Q+Y M +NG            +IS D +  
Sbjct: 1   MTSGAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDANGGSVTAVGGRGSAQISADGKTL 60

Query: 347 -----------------------ASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                                   S+    P  SP G +I ++   G    + ++  DG 
Sbjct: 61  VMINGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQGLGKVLQLVSADGR 120

Query: 382 -QERLLVEDSNLQAPTWSP 399
            +  L   D  ++ P WSP
Sbjct: 121 FKASLPGSDGQVKFPAWSP 139


>gi|170744520|ref|YP_001773175.1| peptidase S41 [Methylobacterium sp. 4-46]
 gi|168198794|gb|ACA20741.1| peptidase S41 [Methylobacterium sp. 4-46]
          Length = 1125

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 33/205 (16%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD----TRIDRAPKRIGNFRSMILAP 263
           P+R     +   SP  Q+VA     D   + V   D     RI R P    N       P
Sbjct: 331 PARSSEFSDLAVSPTGQEVALVAQGD---ISVAARDGKSVKRITRGPGEARN-------P 380

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQ-------SNAT----ERLTNTLFINISASYSPD 312
            FS +G+R   + ++D    +Y   L        + AT     RL +     +   Y+PD
Sbjct: 381 TFSPDGRRLAYAAERDGRWGLYETSLAVPEETGFAQATRLVERRLPSAEGDALVPRYAPD 440

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLIAFTKFSG 368
             ++ +  DR     L +  ++G+D++ +   +  +Y D      WSP    +A      
Sbjct: 441 GRRLAYVLDRAAVHILDL--ASGADREVVPPGRFYAYDDGRWWLAWSPDSRWLALPIQGE 498

Query: 369 EKFA--IGVMKKDGSQERLLVEDSN 391
           + FA  + V+  DGS+  L V  + 
Sbjct: 499 QSFATNVAVVPADGSRPPLRVAPAG 523


>gi|149173999|ref|ZP_01852627.1| probable TolB protein (Precursor) [Planctomyces maris DSM 8797]
 gi|148846979|gb|EDL61314.1| probable TolB protein (Precursor) [Planctomyces maris DSM 8797]
          Length = 309

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 63/277 (22%), Positives = 103/277 (37%), Gaps = 85/277 (30%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAY--------ATYDDEDILRVYLMDTRIDR-------- 248
           ++ P        P FSP+ QK+A+          + D  I+ V    T ++         
Sbjct: 50  FIVPGEYYTAGSPVFSPDGQKLAFDGRKSQEGEKFSDGKIITVNADGTNLEAIGSGVMPS 109

Query: 249 ---APKRI----------------GNFRSMILA----PRFSSNGKRALISVQKDEAMDIY 285
              A  RI                G+ R MI A     ++S +GK+   +V+     +I 
Sbjct: 110 WSPAGNRIAFSQISPSGAALMHADGSHREMIEAGGWGAQWSPDGKKIAYTVRSGNKANIR 169

Query: 286 SVDLQSN-------ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY---VMQSNG 335
             DL          A E   ++++ N++  +SPDS+ I F+  R   E  Y    + + G
Sbjct: 170 VYDLVEGTRTDLFPAGESPYSSIYWNMT--WSPDSNWICFKG-RNANESTYEIATVNAAG 226

Query: 336 SDQ--KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----D 389
             Q  K    +K A Y D  W P G+ I F                G+Q R L++    +
Sbjct: 227 KQQGYKVHYSNKTAPYADIAWHPSGEKIVFAA--------------GAQPRQLMQFNPAE 272

Query: 390 SNLQAP-------------TWSPSGRSLIFSRKKDGD 413
               AP              ++P G+SL+F+    G+
Sbjct: 273 DKPPAPIEIKVNGTIIGDVCFTPDGQSLLFNVSGTGE 309



 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 40/175 (22%), Positives = 76/175 (43%), Gaps = 14/175 (8%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVD--LQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +P FS +G++     +K +  + +S    +  NA       +   +  S+SP  ++I F 
Sbjct: 61  SPVFSPDGQKLAFDGRKSQEGEKFSDGKIITVNADGTNLEAIGSGVMPSWSPAGNRIAFS 120

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-K 378
                   L  M ++GS ++ I    EA  +   WSP G  IA+T  SG K  I V    
Sbjct: 121 QISPSGAAL--MHADGSHREMI----EAGGWGAQWSPDGKKIAYTVRSGNKANIRVYDLV 174

Query: 379 DGSQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +G++  L     +  +      TWSP    + F  +   ++  ++ +++  G+ +
Sbjct: 175 EGTRTDLFPAGESPYSSIYWNMTWSPDSNWICFKGRNANESTYEIATVNAAGKQQ 229


>gi|322371404|ref|ZP_08045953.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
 gi|320548936|gb|EFW90601.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
          Length = 676

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 58/129 (44%), Gaps = 14/129 (10%)

Query: 310 SPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQGDLIA 362
           SPD  ++ F     + D + +  +YV+   G + K+  IS+  ++S   P WSP GD +A
Sbjct: 21  SPDGERVAFVRSVPKDDEKYEATVYVVPLGGDEPKQFTISEGVDSS---PRWSPSGDRLA 77

Query: 363 FTKFSG---EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           F    G   ++  + VM   G + R + +    +    WSP G  + F +    D   + 
Sbjct: 78  FVSTRGADDDRPQLWVMPTAGGEARQVTDVAGGVSQLAWSPDGTKIAFVQSSTEDDRDEE 137

Query: 419 YSIDLNGRN 427
             + L+G  
Sbjct: 138 RDVSLDGEE 146


>gi|330836145|ref|YP_004410786.1| hypothetical protein Spico_0166 [Spirochaeta coccoides DSM 17374]
 gi|329748048|gb|AEC01404.1| hypothetical protein Spico_0166 [Spirochaeta coccoides DSM 17374]
          Length = 946

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 63/295 (21%), Positives = 123/295 (41%), Gaps = 19/295 (6%)

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD-FNSRILFVSESVVSGIIKNSLCVM 196
           Q  G  F    +++R      + +I+ +   E+ D   SR  F + ++ S     +  + 
Sbjct: 250 QFTGFPFLGMDSAFRSHTGMTALEIFSAALKEQADKLASRSRFRTGTLFSPDEPGTYSLP 309

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGN 255
            R  A +  LT   D+     R+  N+ + +  A     D L     D  +  A  RI  
Sbjct: 310 YRTEAGLIGLTAHPDRTARMVRYGANETETSMLAVIPGADGLSFSASDDGLKVAYSRI-- 367

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSS 314
                     S++ +   I        DI   ++  +++  LT+   F++   + SPD  
Sbjct: 368 ---------HSTSWEYGAIGTAAVSYADIVLYNVDDDSSVWLTSGGRFLH--PALSPDGK 416

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +++       + +L  +  +G D + +  + E S ++P +SP G  IAF + S    ++ 
Sbjct: 417 KLIAIEATGTRYRLVRIPMDGGDGEVLYDNPETSVYEPRFSPDGRSIAFIETSHGLSSLR 476

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +M +DG +  +    + ++ P +S S  +L+FS   DG     LY  D++    T
Sbjct: 477 IMDEDGIRSVVPPGRAEIRYPRFSGS-DTLLFSSDVDGTF--ALYGADISSSKNT 528


>gi|303242868|ref|ZP_07329331.1| Peptidoglycan-binding lysin domain protein [Acetivibrio
           cellulolyticus CD2]
 gi|302589587|gb|EFL59372.1| Peptidoglycan-binding lysin domain protein [Acetivibrio
           cellulolyticus CD2]
          Length = 461

 Score = 39.3 bits (90), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 5/122 (4%)

Query: 311 PDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           PD  +++F+S D  G +QLY ++ +GS++K+I  +    Y +   SP G  I +T  S  
Sbjct: 274 PDGKELLFQSPDSSGIKQLYRIREDGSNKKQIGNNIWNFYNNVELSPDGSFILYTTPSAS 333

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRK--KDGDTGSKLYSIDLNG 425
              I  ++ +  +   +      +   P WS     +I+S    + G   S++   +L G
Sbjct: 334 VSIIYTLEINTGKIHQVPSGPQGKDYYPKWSTDSTRIIYSSTNYRPGSFYSQINIAELQG 393

Query: 426 RN 427
           RN
Sbjct: 394 RN 395


>gi|153873783|ref|ZP_02002249.1| beta transducin-like protein [Beggiatoa sp. PS]
 gi|152069751|gb|EDN67751.1| beta transducin-like protein [Beggiatoa sp. PS]
          Length = 627

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 9/152 (5%)

Query: 172 DFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           DF   + F S+  +V+SG   N++   ++ G  +           +   FSP Q +   +
Sbjct: 92  DFVMAVAFSSDDNTVLSGSADNTIKAWNKAGQKLDSFQDDFAGWFYSIAFSPTQNQALLS 151

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           T  D     + L DT        +   +  +    FS +G +AL S  +D  M ++ ++ 
Sbjct: 152 TSSDN---TLKLWDTENGNETGTLKGHQDWVYLVVFSPDGNKAL-SASEDGTMKVWDIEN 207

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +  A       ++   +A++SPD SQI+   D
Sbjct: 208 EEEAQSFEVEHIW---AAAFSPDGSQILTGGD 236


>gi|282864943|ref|ZP_06273997.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Streptomyces sp. ACTE]
 gi|282560368|gb|EFB65916.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Streptomyces sp. ACTE]
          Length = 629

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP G  +A+         + V   D  +E  R+  ED NL +  W+ + R L+++R + G
Sbjct: 24  SPDGTKVAYLAPWRTHLNLWVGSVDAPEEARRVTSEDRNLLSYHWTGNPRWLLYTRDQGG 83

Query: 413 DTGSKLYSIDL 423
           D  S+LY +DL
Sbjct: 84  DENSRLYRVDL 94


>gi|148263039|ref|YP_001229745.1| peptidase S9B dipeptidylpeptidase IV subunit [Geobacter
           uraniireducens Rf4]
 gi|146396539|gb|ABQ25172.1| WD-40 repeat-containing protein [Geobacter uraniireducens Rf4]
          Length = 976

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 84/215 (39%), Gaps = 20/215 (9%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKR 271
           L  PRFSP+  ++A+   D     +  +  T  D A  +   FR         +S +G R
Sbjct: 319 LTNPRFSPDGGRLAFNVNDPHGHSKTVI--TSRDGATIQ-AEFRRQFSDQGLSWSPDGNR 375

Query: 272 ALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
              +  +     D   D+Y+ DL+ +  +RLT+ L I      SPD        +  G +
Sbjct: 376 LYFAQAEVVRGFDIYQDLYAYDLRRDRVQRLTSGLRIK-DPEISPDGKYFALAVNDRGSQ 434

Query: 327 QLYVMQS-------NGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMK 377
            L ++ +       N    + ++  ++     P W+P    IA+  T   G+        
Sbjct: 435 NLALLDARETLDGRNNLKPRLVTAYRQERVATPRWAPDSRTIAYAVTDNRGKTSLRLYDV 494

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           K G    LL    N   P+WS  GR + +   + G
Sbjct: 495 KSGQDRPLLTVSYNAAYPSWSRDGRIIYYVSDETG 529



 Score = 36.6 bits (83), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 28/125 (22%), Positives = 62/125 (49%), Gaps = 5/125 (4%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD--EDILRVYLMDTRIDRAPKRIGN 255
           R+    R +T  R + +  PR++P+ + +AYA  D+  +  LR+Y + +  DR P    +
Sbjct: 448 RNNLKPRLVTAYRQERVATPRWAPDSRTIAYAVTDNRGKTSLRLYDVKSGQDR-PLLTVS 506

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           + +    P +S +G+       +    ++++ DL+   + ++++ L   +    +PD   
Sbjct: 507 YNAAY--PSWSRDGRIIYYVSDETGVYNLFAYDLKEEKSYQVSHLLGGAMQPDAAPDDDT 564

Query: 316 IVFES 320
           +VF S
Sbjct: 565 LVFSS 569


>gi|242811032|ref|XP_002485707.1| acylamino-acid-releasing enzyme, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218716332|gb|EED15754.1| acylamino-acid-releasing enzyme, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 729

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 33/187 (17%)

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDRE---GKEQLYVMQ-SNGSDQKRISQDK 345
           +++++ +LT  LF + + ++SPD + + F SDR     K  +Y++    G +   I+ + 
Sbjct: 117 RADSSRQLTRGLFRDYAPAWSPDGNAVAFVSDRADAGSKWAIYLLSLQEGCEAYPITPET 176

Query: 346 EASYFDP-VWSPQGDLIAFTKFS------------------GE--KFA-IGVMKKDGSQE 383
            AS  +   +SP G  IAF                      GE  +FA + V+     Q 
Sbjct: 177 SASPIEAFAFSPDGSRIAFLSADEDIQLASAGDGPPDVQPWGETWRFARLRVVDLRTKQV 236

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGD------TGSKLYSIDLNGRN-ETLINTPAY 436
           R    D ++ +  WSP G  + FS     D      TG+ + +ID++  + E + + P  
Sbjct: 237 RCAKLDRHVTSVCWSPDGTRIGFSSCLSPDIEESHITGTTVSAIDVDLSSVEDVCHFPKM 296

Query: 437 ASDPQWV 443
             D  W 
Sbjct: 297 VVDLSWA 303


>gi|116624506|ref|YP_826662.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227668|gb|ABJ86377.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 687

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 19/142 (13%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF------ESDREGKEQLYVMQSN-GS 336
           +Y  D+ +   E LT+      SA +SPD   I F      + +R     ++VM++  G+
Sbjct: 201 LYLYDVATKKAEALTDPSLEAASAVWSPDGKWISFIGRSGKDWERYNTNNVFVMEARAGA 260

Query: 337 DQKRISQ----DKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLL 386
             ++++Q        S     WSP G  + + + +G K +      I ++   G   ++L
Sbjct: 261 VPRQLTQYDGVRGSVSRGRAEWSPDGTKLVYLQSTGAKQSAYNMTRIAMVPVAGGTPQVL 320

Query: 387 VE--DSNLQAPTWSPSGRSLIF 406
            +  D  + AP ++P G S+IF
Sbjct: 321 ADKLDRGVSAPRFTPDGASVIF 342


>gi|75908403|ref|YP_322699.1| peptidase C14 [Anabaena variabilis ATCC 29413]
 gi|75702128|gb|ABA21804.1| Peptidase C14, caspase catalytic subunit p20 [Anabaena variabilis
            ATCC 29413]
          Length = 1240

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 29/190 (15%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             RLWDV    Q IG+           I H            E G ++       + +VSG
Sbjct: 975  LRLWDVNG--QPIGQPL---------IGH------------ESGVYSVAFSPDGQRIVSG 1011

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               N+L + D +G +I       +  ++   FSP+ Q++   ++D  + LR++ ++ +  
Sbjct: 1012 SGDNTLRLWDVNGQSIGQPLIGHESGVYSVAFSPDGQRIVSGSWD--NTLRLWDVNGQSI 1069

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              P  IG+  S + +  FS +G+R ++S   D  + ++ V+ Q      + +   + IS 
Sbjct: 1070 GQP-LIGH-ESGVYSVAFSPDGQR-IVSGSWDNTLRLWDVNGQPIGQPLMGHKAAV-ISV 1125

Query: 308  SYSPDSSQIV 317
            ++SPD  +IV
Sbjct: 1126 AFSPDGQRIV 1135



 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 9/158 (5%)

Query: 162  IYQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            I Q + G +G  NS + F    + +VSG   N+L + D +G  I       +  ++   F
Sbjct: 943  IGQPLIGHEGAVNS-VAFSPDGQCIVSGSWDNTLRLWDVNGQPIGQPLIGHESGVYSVAF 1001

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+ Q++   + D  + LR++ ++ +    P  IG+  S + +  FS +G+R ++S   D
Sbjct: 1002 SPDGQRIVSGSGD--NTLRLWDVNGQSIGQP-LIGH-ESGVYSVAFSPDGQR-IVSGSWD 1056

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              + ++ V+ QS     + +   +  S ++SPD  +IV
Sbjct: 1057 NTLRLWDVNGQSIGQPLIGHESGV-YSVAFSPDGQRIV 1093


>gi|145605657|ref|XP_370472.2| hypothetical protein MGG_06969 [Magnaporthe oryzae 70-15]
 gi|145013456|gb|EDJ98097.1| hypothetical protein MGG_06969 [Magnaporthe oryzae 70-15]
          Length = 924

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 5/66 (7%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + ++SP+ S I   + ++GK  L + +S G  Q  I++   A+  D VW P+ ++++FT 
Sbjct: 236 AMAWSPNGSMIA-TAAKDGK--LLIWESRG--QSVIARHSYANIMDIVWHPKANIVSFTT 290

Query: 366 FSGEKF 371
           F+GE F
Sbjct: 291 FAGEVF 296


>gi|119773984|ref|YP_926724.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Shewanella amazonensis SB2B]
 gi|119766484|gb|ABL99054.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Shewanella amazonensis SB2B]
          Length = 700

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 43/211 (20%), Positives = 88/211 (41%), Gaps = 9/211 (4%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P  SP+ + + Y          ++ +D    D +P+++    S  L   +S++GK     
Sbjct: 178 PSVSPDGRFLVYGGQQPGKNGSLFQLDLEHPDASPRQLTPDSSDELRAVWSNDGKSLYFP 237

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----LYVM 331
                   I  +DL+      L +   +  +   + D + + F +    ++     L  +
Sbjct: 238 SASAGECKITRLDLKDGQLTPLADCTSVTTAIDLTVDGTGLAFITTNAPQKNAGIYLLDL 297

Query: 332 QSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKK--DGSQERLLV 387
               ++  R+S D E  Y D    +SP G  +A  +  G+      +++  DGS+ RL  
Sbjct: 298 TEKEAEPVRLSCDTECPYRDRDFAFSPDGQTLAIARRFGDISEDIFLRQLADGSERRLTQ 357

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              +++  +W   GR L++S ++ G+ G  L
Sbjct: 358 GIEDIRGLSWHRDGRRLVYSTEEAGNRGGYL 388


>gi|170725571|ref|YP_001759597.1| winged helix family two component response transcriptional
           regulator [Shewanella woodyi ATCC 51908]
 gi|169810918|gb|ACA85502.1| putative two component transcriptional regulator, winged helix
           family [Shewanella woodyi ATCC 51908]
          Length = 714

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 18/163 (11%)

Query: 261 LAPRFSSNGKRALI-SVQKDEAMDIYSVDL--QSNATERLTNTLFINISASYSPDSSQIV 317
           L P  S +G+  +  S  K++   +Y  DL   +   +RLT+T      A + PD+  + 
Sbjct: 189 LYPAVSPDGRWLVYGSRSKNKRTSLYLKDLLKPTETPKRLTSTKTSEYRAVWHPDAGALY 248

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW---SPQGDLIAFTKFSGEKFAIG 374
           + S+++GK  L V+  + ++  ++     A Y D      SP G  +A+    G     G
Sbjct: 249 YPSEQKGKCSLTVLNLDSNEATKLG----ACYSDTAAIDISPDGSSLAYIWNEGNGHHSG 304

Query: 375 VMK-----KDGSQERLLVED---SNLQAPTWSPSGRSLIFSRK 409
           + +     KD    RL   +   S  +  T+SP GR L  +R+
Sbjct: 305 IYQLNLKDKDAEPVRLSCAENCGSRDRDMTFSPDGRWLAIARR 347


>gi|270158757|ref|ZP_06187414.1| dipeptidyl peptidase domain protein [Legionella longbeachae D-4968]
 gi|289166441|ref|YP_003456579.1| prolyl oligopeptidase [Legionella longbeachae NSW150]
 gi|269990782|gb|EEZ97036.1| dipeptidyl peptidase domain protein [Legionella longbeachae D-4968]
 gi|288859614|emb|CBJ13584.1| putative prolyl oligopeptidase [Legionella longbeachae NSW150]
          Length = 664

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 12/117 (10%)

Query: 302 FINISASYSPDSSQ----IVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           F+ I     PD S+    +V+     +S  +G + ++++  +G+  K+++  K+ S + P
Sbjct: 35  FLRIKTISEPDLSKNGDWVVYSVEEGKSKTQGIKNIWLVSYDGTIAKQLTYSKKNSNYLP 94

Query: 353 VWSPQGDLIAFTKFSG-EKFAIGVM--KKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            WSP G  IAF   SG +K  I  +  K+ G   RL      +    W+P  ++++F
Sbjct: 95  KWSPDGQWIAFLSESGDDKTPILKLFSKQSGKVIRLTNPHYEVSDFVWAPDSKNIVF 151



 Score = 37.0 bits (84), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 79/186 (42%), Gaps = 27/186 (14%)

Query: 217 PRFSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           P +S +  ++AY       A Y D    ++ ++D    +  + +G        P++S +G
Sbjct: 269 PSWSSDNSQIAYIRSANSQAMYYDYAPTQLAVVDVATGQE-RVVGPVDQWFTDPQWSEDG 327

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           K   + ++    + + +VD+ +   +RLT    ++   S +P    +V  SD +   +L+
Sbjct: 328 KIIYVLMETSRNIHLSAVDVHTGKVQRLTQGSRVDEYFSVAPQKIVLV-SSDDQHPSELF 386

Query: 330 VMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            ++ NG  Q      K  E  +F PV     + I F  F G +            E LLV
Sbjct: 387 ALEKNGLRQLTHHNQKLLEEVHFVPV-----EDIEFDSFDGTRI-----------EGLLV 430

Query: 388 EDSNLQ 393
           + +N +
Sbjct: 431 KPANYK 436


>gi|88857110|ref|ZP_01131753.1| hypothetical protein PTD2_01081 [Pseudoalteromonas tunicata D2]
 gi|88820307|gb|EAR30119.1| hypothetical protein PTD2_01081 [Pseudoalteromonas tunicata D2]
          Length = 673

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 2/99 (2%)

Query: 276 VQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           V KD    +++ VD ++     L +     +S  +SPD S++ F S+  G  Q++V    
Sbjct: 57  VMKDSTRRNLWLVDTKTGVQSPLFSDENQYMSPRWSPDGSKVAFLSNASGSTQIHVHYLT 116

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +    +SQ  E+      WSP G  +AF++   EK A+
Sbjct: 117 ENRTALLSQ-LESGVSGLTWSPDGKWLAFSQLVAEKPAV 154



 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 17/131 (12%)

Query: 294 TERLTNTLFIN---ISASY------SPDSSQIVFESDRE------GKEQLYVMQSNGSDQ 338
           T  L NTLF      S  Y      SP   Q+V+  +         +  L+++ +    Q
Sbjct: 17  TVALANTLFSANDIFSLEYASDVQLSPSGQQVVYIRNSNDVMKDSTRRNLWLVDTKTGVQ 76

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTW 397
             +  D E  Y  P WSP G  +AF   +     I V     ++  LL + +S +   TW
Sbjct: 77  SPLFSD-ENQYMSPRWSPDGSKVAFLSNASGSTQIHVHYLTENRTALLSQLESGVSGLTW 135

Query: 398 SPSGRSLIFSR 408
           SP G+ L FS+
Sbjct: 136 SPDGKWLAFSQ 146


>gi|46122903|ref|XP_386005.1| hypothetical protein FG05829.1 [Gibberella zeae PH-1]
          Length = 676

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 78/175 (44%), Gaps = 32/175 (18%)

Query: 264 RFSSNGKRALISVQ--------KDEAMDIY-SVDLQSNATERLTNTLFINISASYSPDSS 314
           +FS NG+R + S          K+    ++ +   + N++ +LT+  F + S ++ P+  
Sbjct: 26  KFSPNGQRLVYSTSLVGGHRKGKNHTSTLWLASTYEPNSSRKLTSGSFHDTSPTWHPNGD 85

Query: 315 QIVFESDR---EGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFS--- 367
            I+F SDR        ++ M+ +G D   I+ +D E        SP G  IA+       
Sbjct: 86  SILFLSDRVKLGETSAIWRMRLDGGDPVAITAEDNEQDIDTFSISPDGKTIAYVSCDEKK 145

Query: 368 ------------GEKF---AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIF 406
                       GEK+    + ++  +  + +++V  D+++    WSP G+SL F
Sbjct: 146 KDDDEEAEPEVWGEKWDHARLRIVDVETHETKVIVGGDTHVGEIAWSPDGKSLTF 200


>gi|256840705|ref|ZP_05546213.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256737977|gb|EEU51303.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 703

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 9/96 (9%)

Query: 266 SSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GKR + +V      +     +++ ++   +  +++T T F    A +    ++IVF 
Sbjct: 65  SPDGKRVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTGFAENEAVWIKGGTKIVFL 124

Query: 320 SDREGKEQLYVMQSNGSDQKRIS---QDKEASYFDP 352
            +  G  QL+ M  +G+D+KR+S   +D E   F P
Sbjct: 125 CNESGSSQLWEMNPDGTDRKRLSDYDKDIEGFAFSP 160



 Score = 38.1 bits (87), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 13/164 (7%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKE 326
           GK   IS   D    IY  DL +  T  +T      + + +YSPD   I + S +R+G E
Sbjct: 263 GKEYAISTNSD----IYVYDLNTKQTTNITEENKGYDTNPTYSPDGKSIAWLSMERDGYE 318

Query: 327 ----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGS 381
               +L VM     ++  +S+D +++     WS     I FT  + GE     +   +G+
Sbjct: 319 ADQNRLMVMNLETGEKTFVSKDFDSNVDSYCWSADCKRIYFTGVWHGESQVYQIDLANGN 378

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +   L E     A   +  G  LI +++     G ++YSIDL G
Sbjct: 379 KITPLTEGMYDYASV-ALLGDKLI-AQRHSMSMGDEIYSIDLTG 420


>gi|327543092|gb|EGF29531.1| TolB protein [Rhodopirellula baltica WH47]
          Length = 1169

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 8/115 (6%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           K  L V++ +G+D + +++  E       P WSP G  IA+ + +G      +M+ D + 
Sbjct: 887 KPVLSVVRIDGTDLRDLAEPNETLLHVGSPDWSPDGTQIAYDQQAGSTLTARLMRVDKTG 946

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               V+      PT+SP G+ + FS  + G     +  +D +G N T++++  + 
Sbjct: 947 GD-PVDLGFGSMPTFSPDGKRIAFSAARQG-----VGIMDADGSNRTILDSSGWG 995


>gi|168180499|ref|ZP_02615163.1| putative lipoprotein [Clostridium botulinum NCTC 2916]
 gi|182668879|gb|EDT80857.1| putative lipoprotein [Clostridium botulinum NCTC 2916]
          Length = 357

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 20/164 (12%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQLYVM 331
           S+Q  E M IY  DL++    ++ + + ++ S     +  +I++    S++E K ++Y  
Sbjct: 139 SLQSAEGMKIY--DLENKKEIKIKSDVLVSGSLFKWLNEDEILYYGINSEKENKAKIY-- 194

Query: 332 QSNGSDQKRISQDKEASYFDPV------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                 +  + ++KE  Y D +      + P GD +      G+KF +    K  +  + 
Sbjct: 195 ------KYNVKENKEEVYVDNIEGICTYFMPNGDNVLLLSRQGDKFNLSYYNKKDNSFKK 248

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           + E+ N Q    + S +++ F  K D +    LY ID N  N T
Sbjct: 249 ISEEVN-QVYKGTKSTKNMYFLGKNDLENKDYLYKIDGNTLNLT 291


>gi|150006551|ref|YP_001301295.1| putative exported peptidase [Bacteroides vulgatus ATCC 8482]
 gi|294778830|ref|ZP_06744247.1| WD40-like protein [Bacteroides vulgatus PC510]
 gi|149934975|gb|ABR41673.1| putative exported peptidase [Bacteroides vulgatus ATCC 8482]
 gi|294447283|gb|EFG15866.1| WD40-like protein [Bacteroides vulgatus PC510]
          Length = 1086

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y    + + T+++TNT        +SPD   IV+ ++R G  Q+Y       ++K+ +
Sbjct: 336 DVYVTSTEYSTTKQITNTPQQERDIHFSPDGRSIVYAAERNGLWQIYQTSLAKKEEKQFA 395

Query: 343 ----------QDKEASYFDPVWSPQGDLIAF 363
                      + + + F P +SP G  +AF
Sbjct: 396 YATDIKEERLTNSDITSFQPQYSPDGKEVAF 426


>gi|170728819|ref|YP_001762845.1| transcriptional regulator, CadC [Shewanella woodyi ATCC 51908]
 gi|169814166|gb|ACA88750.1| transcriptional regulator, CadC [Shewanella woodyi ATCC 51908]
          Length = 711

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 16/113 (14%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT------------NTLFINISA 307
           I +P F  +GKR +++++     DI +V L       L+             + F    A
Sbjct: 423 IGSPLFHPDGKR-MLAIKGHYDSDIVAVPLSQFTDNPLSLDGSNFRHSVIARSTFGENHA 481

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGD 359
            Y P+   I + S R G  Q+++ Q  GS+ +++SQ   +SY +D VW   GD
Sbjct: 482 KYQPNGDAIAYTSKRSGSWQMWLTQ--GSNTQQLSQFPLSSYIYDFVWGADGD 532


>gi|148656255|ref|YP_001276460.1| hypothetical protein RoseRS_2129 [Roseiflexus sp. RS-1]
 gi|148568365|gb|ABQ90510.1| hypothetical protein RoseRS_2129 [Roseiflexus sp. RS-1]
          Length = 487

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 69/178 (38%), Gaps = 34/178 (19%)

Query: 265 FSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--D 321
           F+S+    LI+V ++ +  DI+ V    +A  R+TN   I  S S++PD S +VF +   
Sbjct: 145 FASSADGNLIAVTRETDQFDIWIVSRDGSALRRITNDRDIESSLSWAPDGSALVFAAADA 204

Query: 322 REGKEQLYVMQSNGSDQKRIS--------QDKEASYFDPVWSPQGDLIAF--------TK 365
            E   QL+   +      ++S        +   A   DP  SP G  IA+        T 
Sbjct: 205 SEPLPQLWPDWALWCGASQVSVIDLASGQRQTLARGCDPAVSPDGRRIAYSAPPTARDTG 264

Query: 366 FSGEKFAIG---------------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            +G     G                   DG+   L      +  P WSP G S+ + R
Sbjct: 265 MAGGAPVFGNALRLINRRGENGWNFASADGADAPLPNTGMLVYGPAWSPDGASVTYHR 322


>gi|171059834|ref|YP_001792183.1| peptidase S9 prolyl oligopeptidase [Leptothrix cholodnii SP-6]
 gi|170777279|gb|ACB35418.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Leptothrix cholodnii SP-6]
          Length = 668

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 18/114 (15%)

Query: 308 SYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGD 359
           S  PD +Q V    R           L+++ + G   + ++   DK+     P WSP GD
Sbjct: 22  SLCPDGAQAVVSVTRHDMAHNRSHSALWLLSTLGGAPRALTHCGDKDGQ---PAWSPHGD 78

Query: 360 LIAFTKFSGEKFA------IGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIF 406
           LIAF     ++ A      + ++  DG + +R  V  + ++A  W P G+ + F
Sbjct: 79  LIAFIARRDQQGAKDEEPQLYLIAPDGGEAQRAAVLPTGVEAFKWFPDGKRIAF 132


>gi|302384287|ref|YP_003820110.1| acylamino-acid-releasing enzyme [Brevundimonas subvibrioides ATCC
           15264]
 gi|302194915|gb|ADL02487.1| acylamino-acid-releasing enzyme [Brevundimonas subvibrioides ATCC
           15264]
          Length = 705

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 19/131 (14%)

Query: 308 SYSPDSSQIVFESDREGKEQLY-----VMQSNG---SDQKRISQDKEASYFDPVWSPQGD 359
           +++PDS+ IVF +   G+ + +     + ++NG        ++ D +A    PV+SP G 
Sbjct: 252 TFTPDSAAIVFSARVAGQTEPWSTNFDLFRTNGLTGPGFTNLTDDNDAWDTGPVYSPDGR 311

Query: 360 LIAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDG 412
            +A+       F  +++ I +M      +R +  D +  + T  WS  GRSL       G
Sbjct: 312 TLAYRAMKRPGFEADRYQIVLMDVATGAKREVAADWDRSSDTLQWSADGRSLFVIA---G 368

Query: 413 DTG-SKLYSID 422
           D G +KL+ ID
Sbjct: 369 DVGQTKLFQID 379


>gi|315123008|ref|YP_004065014.1| putative peptidase [Pseudoalteromonas sp. SM9913]
 gi|315016768|gb|ADT70105.1| putative peptidase [Pseudoalteromonas sp. SM9913]
          Length = 672

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 21/84 (25%), Positives = 44/84 (52%), Gaps = 1/84 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +I+SVD  +   + LT+ ++++ S   SPD  ++ F S+R G  Q+Y+         ++S
Sbjct: 64  NIWSVDYSTGQLQPLTSGVYMDYSPVVSPDGQRLAFISNRNGSNQIYIKWLKTGAIAKVS 123

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF 366
            +  ++     W+P  + + F+ F
Sbjct: 124 -NLTSNPSSLTWTPDSNQLVFSMF 146


>gi|315644874|ref|ZP_07898003.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Paenibacillus vortex V453]
 gi|315279816|gb|EFU43117.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Paenibacillus vortex V453]
          Length = 666

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 6/66 (9%)

Query: 351 DPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           DPV SP    IA+       KF G +  I ++   G+Q+          AP WSP G  L
Sbjct: 20  DPVVSPASGAIAYVHKSVSEKFDGYRSHIRLLPTVGTQDIPFTSGEADAAPAWSPDGSEL 79

Query: 405 IFSRKK 410
            F RKK
Sbjct: 80  AFLRKK 85


>gi|299139909|ref|ZP_07033080.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
 gi|298598056|gb|EFI54223.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
          Length = 407

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 52/89 (58%), Gaps = 6/89 (6%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---KFSGEKFAIGVMKKDG 380
           G ++++++ ++G   K++++  E+    PV+SP G  IA     +F+ E+  I ++  +G
Sbjct: 23  GWDKVFLIPASGGKPKQLTKG-ESEDETPVYSPDGKSIAIVSNREFA-EEHHIWIVPLNG 80

Query: 381 SQERLLVEDSNLQA-PTWSPSGRSLIFSR 408
           S+ R L   + +++ P WSP G ++ F R
Sbjct: 81  SKPRRLTHLAGVESDPQWSPDGTTIYFQR 109



 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 19/144 (13%)

Query: 270 KRALISVQKDEAMD--------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            R+L++ Q+D +          ++ +       ++LT     + +  YSPD   I   S+
Sbjct: 5   HRSLVTGQQDLSSGFQETGWDKVFLIPASGGKPKQLTKGESEDETPVYSPDGKSIAIVSN 64

Query: 322 REGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKK 378
           RE  E+  ++++  NGS  +R++        DP WSP G  I F + +  +  A      
Sbjct: 65  REFAEEHHIWIVPLNGSKPRRLTHLAGVES-DPQWSPDGTTIYFQRGTALRSPATYTAAT 123

Query: 379 DGSQERLL-------VEDSNLQAP 395
           +G +   L        E +NL AP
Sbjct: 124 NGGEAHPLNPLPPSKYEQANLPAP 147


>gi|255014962|ref|ZP_05287088.1| putative peptidase [Bacteroides sp. 2_1_7]
 gi|298376459|ref|ZP_06986414.1| prolyl oligopeptidase family protein [Bacteroides sp. 3_1_19]
 gi|298266337|gb|EFI07995.1| prolyl oligopeptidase family protein [Bacteroides sp. 3_1_19]
          Length = 703

 Score = 39.3 bits (90), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 13/164 (7%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKE 326
           GK   IS   D    IY  DL +  T  +T      + + +YSPD   I + S +R+G E
Sbjct: 263 GKEYAISTNSD----IYVYDLNTKQTTNITEENKGYDTNPTYSPDGKSIAWLSMERDGYE 318

Query: 327 ----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGS 381
               +L VM     ++  +S+D +++     WS   + I FT  + GE     +   +G+
Sbjct: 319 ADQNRLMVMNLETGEKTFVSKDFDSNVDSYCWSADCERIYFTGVWHGESQVYQIDLANGN 378

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +   L E     A   +  G  LI +++     G ++YSIDL G
Sbjct: 379 KITPLTEGMYDYASV-ALLGDKLI-AQRHSMSMGDEIYSIDLTG 420



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 9/96 (9%)

Query: 266 SSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GKR + +V      +     +++ ++   +  +++T T F    A +    ++I F 
Sbjct: 65  SPDGKRVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTGFAENEAVWIKGGTKIAFL 124

Query: 320 SDREGKEQLYVMQSNGSDQKRIS---QDKEASYFDP 352
            +  G  QL+ M  +G+D+KR+S   +D E   F P
Sbjct: 125 CNESGSSQLWEMNPDGTDRKRLSDYDKDIEGFAFSP 160


>gi|299139123|ref|ZP_07032299.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
 gi|298598803|gb|EFI54965.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
          Length = 666

 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 86/214 (40%), Gaps = 39/214 (18%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQIVFES 320
            S NG     +++  E   I+  +L      +L      +  AS    +SPDS  + F S
Sbjct: 40  ISPNGSTLAWTLRDREDSTIHVAELAHFGDAKLVTPHGTSDCASGSPVWSPDSQTLAFTS 99

Query: 321 DREGK------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------TKFSG 368
              GK      EQ+++      + K+++     +   P WSP G  IAF      T+ +G
Sbjct: 100 SCTGKDAKTDQEQIFLWSKATGEIKQLTH-VTGNIEQPAWSPDGKQIAFLFVKNATRSAG 158

Query: 369 EKFAI----GVMKKDGS--QERLLVEDSNLQ-----APT-------WSPSGRSLIF-SRK 409
              A+    GV+ +DG   Q+   V  ++ Q     AP+       WSP  R + F +  
Sbjct: 159 ALDAMKPWDGVIGEDGVEIQQVYAVSTTDGQENWETAPSLHVYEFAWSPDSRQVAFIAAN 218

Query: 410 KDGDTG---SKLYSIDLNGRNETLINTPAYASDP 440
             G+     +KLY+  +  R E     P    DP
Sbjct: 219 PPGENNWWVAKLYAQTVLPRGEQPHQEPVVVLDP 252


>gi|94969246|ref|YP_591294.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551296|gb|ABF41220.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 862

 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 13/143 (9%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A++S D   + +    +G   L+  +++GSD+ +++ D E +   P WSP G  I F + 
Sbjct: 613 AAFSKDGQWVAYVEFPQGN--LWRSRTDGSDRLQLTYDGEYAMM-PQWSPDGQTIVFFES 669

Query: 367 S----GEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                G  F + V    G   R ++  +  N Q P +SP G  ++F     G   S +  
Sbjct: 670 PAGKLGHMFEVSV---SGGAPRQILPGATKNQQDPNYSPDGSKIMFG-GASGLPDSTIQI 725

Query: 421 IDLNGRNETLINTPAYASDPQWV 443
           +D+  R  T +        P+W 
Sbjct: 726 LDVKTRQVTTLPGSEGLFSPRWC 748



 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 14/143 (9%)

Query: 302 FINISASYSPDSSQIVF--ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           F+ I+   SPD+SQ++    +       L++  + G   + +  D  A   +  WS  G+
Sbjct: 387 FVGIA--LSPDASQLIAIRRAPSAVAAPLWIAATLGGSPRPLG-DYVAQAAN--WSSDGN 441

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            I F+   G+ F   V  + G+  R +  V  + L    +SP GRSL F R+  GDT   
Sbjct: 442 RIVFSNL-GDIF---VGDRSGAPARKVASVGAAVLSNMIFSPDGRSLRFDRQDRGDTPPT 497

Query: 418 LYSIDLNGRNETLINTPAYASDP 440
           ++ + L+G N   +  P + S P
Sbjct: 498 VWEVGLDGTNLHRV-FPGFTSPP 519


>gi|91216669|ref|ZP_01253634.1| putative exported tricorn protease [Psychroflexus torquis ATCC
           700755]
 gi|91185138|gb|EAS71516.1| putative exported tricorn protease [Psychroflexus torquis ATCC
           700755]
          Length = 1052

 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 11/81 (13%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D++  +   +  +RLT    I  +  +SPD S+I FE++ +G   ++++ +NG   KR
Sbjct: 16  AEDLWVANRDGSNPKRLTIDKGIEANPVFSPDGSKIAFEAEYDGNVDVFIVSANGGVPKR 75

Query: 341 ISQDKEASYFDPVWSPQGDLI 361
           ++           W P  D +
Sbjct: 76  LT-----------WHPYNDYV 85



 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 85/214 (39%), Gaps = 25/214 (11%)

Query: 233 DEDILRVYLMD----TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           D  I  +Y  D     R    PKR+   + +   P FS +G +     + D  +D++ V 
Sbjct: 8   DTHIAFIYAEDLWVANRDGSNPKRLTIDKGIEANPVFSPDGSKIAFEAEYDGNVDVFIVS 67

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV-MQSNGSDQKRISQDKEA 347
                 +RLT   + +    +S DS  ++F S R      Y+ + S  +D   I+Q    
Sbjct: 68  ANGGVPKRLTWHPYNDYVRDFSADSKTVLFVSQRNSFTNRYMQVFSVSTDGGAITQLDIP 127

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---------------SNL 392
           + F   +S     IA+T  + ++F      + G+  R+ + +               SN 
Sbjct: 128 NAFWASYSDNDQSIAYTPIA-DRFNQWKHYRGGTVARIWLYNTQSHKVSEIQKPEGGSND 186

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             P W   G  + F   +DG+    LYS + N +
Sbjct: 187 SQPQW--MGEFVYFKSDRDGEF--NLYSYETNSK 216


>gi|239993670|ref|ZP_04714194.1| Acylaminoacyl-peptidase [Alteromonas macleodii ATCC 27126]
          Length = 708

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S  +SPD S++ + S+ EGK QLYV   + + Q  +  +  ++  +  WSP G  IAFT
Sbjct: 114 SIRWSPDGSRLAYLSNEEGKPQLYVRWMD-TGQTALVTNVTSNPSNITWSPDGKHIAFT 171



 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-----EQLYVMQSNGSD 337
           DI+SVD+  N  + LTN   +  S   SPD   I +    + K       LYVM+S+G+D
Sbjct: 272 DIFSVDMMGNIAQ-LTNDKGLESSPVVSPDGKHIAYARRDDEKVMYKNSYLYVMKSDGTD 330

Query: 338 QKRISQDKEASYFDPVW 354
            K +++D + S  +  W
Sbjct: 331 AKNLTKDVDNSVSNFHW 347


>gi|239981101|ref|ZP_04703625.1| peptidase S9 prolyl oligopeptidase [Streptomyces albus J1074]
 gi|291452970|ref|ZP_06592360.1| peptidase S9 [Streptomyces albus J1074]
 gi|291355919|gb|EFE82821.1| peptidase S9 [Streptomyces albus J1074]
          Length = 629

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP G  IA+      +  + V   +  +E  R+  ED NL +  W+   R L+++R + G
Sbjct: 24  SPDGTKIAYLAPWENRLNLWVGSVEAPEEARRVTSEDRNLLSYHWTDDPRWLLYTRDQGG 83

Query: 413 DTGSKLYSIDLN 424
           D  S LY +DL+
Sbjct: 84  DENSHLYRVDLD 95


>gi|224539442|ref|ZP_03679981.1| hypothetical protein BACCELL_04347 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518947|gb|EEF88052.1| hypothetical protein BACCELL_04347 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 702

 Score = 38.9 bits (89), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 16/108 (14%)

Query: 310 SPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGD 359
           SPD  QI +        + +   +++VM ++G+  K+I+    Q+ E +     W   G 
Sbjct: 61  SPDEKQIAYTVAYYSVPENKSNREVFVMNTDGTGNKQITHTPWQENEVN-----WIKGGT 115

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
            +AF    G    +  M  DGS  + L + D +++  ++SP G+ L+F
Sbjct: 116 KLAFLSNEGGSSQLWEMNPDGSGRKQLTQYDGDIEGYSFSPDGKKLLF 163


>gi|24215766|ref|NP_713247.1| TolB-like protein [Leptospira interrogans serovar Lai str. 56601]
 gi|24196947|gb|AAN50265.1| TolB-related protein [Leptospira interrogans serovar Lai str.
           56601]
          Length = 2588

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 40/216 (18%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EG 324
           +++G     +  +    DI+  DL+S+ T  +T         + SPD  ++VF S++ + 
Sbjct: 64  TADGSYLFYTTGQKGNYDIWFRDLKSSITVPVTTHPAPEYKPAISPDGKKLVFVSEQYDS 123

Query: 325 KEQLYVMQSNGS--------DQKRISQD-------------KEASYFD--PVWSPQGDLI 361
              L +++ N           ++ I+ D             K+ SY D  P ++P G  +
Sbjct: 124 SGDLILLKMNPGLWADKILQGKRFINSDFIILTNSNFSDTGKKDSYVDTDPFFAPDGRHL 183

Query: 362 AFTKFSGEKFAIG-----VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            F   S ++   G     V+  +G +   L+      +P WS  G+S+++   +DG  G 
Sbjct: 184 VF---STDRLTPGIQNLVVLDTEGKEPMKLLTQKGGASPFWSKDGKSIVYISYQDGVFGD 240

Query: 417 KLYSIDL-NGRNETLIN------TPAYASDPQWVGF 445
            +Y +DL +G+NE L        +P+ + D +++ +
Sbjct: 241 -VYLLDLSSGKNERLTKDSYLNFSPSLSEDKRYLYY 275


>gi|300712105|ref|YP_003737919.1| prolyl oligopeptidase family protein [Halalkalicoccus jeotgali B3]
 gi|299125788|gb|ADJ16127.1| prolyl oligopeptidase family protein [Halalkalicoccus jeotgali B3]
          Length = 611

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 8/111 (7%)

Query: 307 ASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           AS+SPD ++++F  D  G E  QL+++  +G+    ++   EA +    WS  G+  AF 
Sbjct: 61  ASFSPDRTEVLFGMDEGGNERQQLFLLCPDGTVDP-LTAHPEAKHRFGGWSHDGERFAFA 119

Query: 365 --KFSGEKFAIGVMKKD--GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKK 410
             +  G  F I    +D  G +  L+ E D  L    WSP    LI +   
Sbjct: 120 SNRRDGAVFDIYTQGRDERGEEAELIHEGDGWLTIGGWSPDDERLIVTESH 170


>gi|157368295|ref|YP_001476284.1| hypothetical protein Spro_0046 [Serratia proteamaculans 568]
 gi|157320059|gb|ABV39156.1| conserved hypothetical protein [Serratia proteamaculans 568]
          Length = 426

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 310 SPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---K 365
           SPD S I     D  G  QL+V+  NG D ++++Q ++       W PQG  IA      
Sbjct: 314 SPDGSMIACLMKDDAGVVQLWVVSPNGGDPRQVTQGEQGIQSAFSWHPQGGRIALVCDNS 373

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
               + A G M++    +R  +  S   A  +SP G  + F R+ DG
Sbjct: 374 LMLCEVASGRMQR--LTQRTALPPSG-DAVVFSPDGSKVAFMREIDG 417


>gi|85708707|ref|ZP_01039773.1| hypothetical protein NAP1_05690 [Erythrobacter sp. NAP1]
 gi|85690241|gb|EAQ30244.1| hypothetical protein NAP1_05690 [Erythrobacter sp. NAP1]
          Length = 678

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 58/142 (40%), Gaps = 18/142 (12%)

Query: 263 PRFSSNGKRALISVQKDEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P+ S +G +A+   + ++ M       ++ VDL  +A E L        S  +SPD S+I
Sbjct: 38  PQVSPDGSQAIYVRRFNDIMTDRTRSHVWIVDLDGSAHEPLLADGGSYRSPRWSPDGSRI 97

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            + +   G+  LYV     S +  +    E       WSP G +IAF            M
Sbjct: 98  AYMTSENGRTALYV-HYLASGRSALIGSFERGPSSITWSPDGTMIAF-----------AM 145

Query: 377 KKDGSQERLLVEDSNLQAPTWS 398
             +   ++LL   S  +   W+
Sbjct: 146 SVEAKSDKLLSPPSRPEGANWA 167


>gi|295838967|ref|ZP_06825900.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|197695523|gb|EDY42456.1| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 1073

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---KF 366
           SPD + + + S REG  +++V    G   +R++    A      W+P G+++A T   + 
Sbjct: 51  SPDGATVAWTSHREGAPEVFVAPVEGGPSRRLTYWGSAKTAVRSWTPAGEVVAITSHGQA 110

Query: 367 SGEKFAIGVMKKDGSQERLL 386
           S  +     +  DGS  R L
Sbjct: 111 SMRRTWAHALPLDGSASRRL 130


>gi|45656912|ref|YP_000998.1| hypothetical protein LIC11028 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600149|gb|AAS69635.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 2588

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 48/216 (22%), Positives = 96/216 (44%), Gaps = 40/216 (18%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EG 324
           +++G     +  +    DI+  DL+S+ T  +T         + SPD  ++VF S++ + 
Sbjct: 64  TADGSYLFYTTGQKGNYDIWFRDLKSSITVPVTTHPAPEYKPAISPDGKKLVFVSEQYDS 123

Query: 325 KEQLYVMQSNGS--------DQKRISQD-------------KEASYFD--PVWSPQGDLI 361
              L +++ N           ++ I+ D             K+ SY D  P ++P G  +
Sbjct: 124 SGDLILLKMNPGLWADKILQGKRFINSDFIILTNSNFSDTGKKDSYVDTDPFFAPDGRHL 183

Query: 362 AFTKFSGEKFAIG-----VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            F   S ++   G     V+  +G +   L+      +P WS  G+S+++   +DG  G 
Sbjct: 184 VF---STDRLTPGIQNLVVLDTEGKEPMKLLTQKGGASPFWSKDGKSIVYISYQDGVFGD 240

Query: 417 KLYSIDL-NGRNETLIN------TPAYASDPQWVGF 445
            +Y +DL +G+NE L        +P+ + D +++ +
Sbjct: 241 -VYLLDLSSGKNERLTKDSYLNFSPSLSEDKRYLYY 275


>gi|322371180|ref|ZP_08045732.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
 gi|320549170|gb|EFW90832.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
          Length = 606

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 8/161 (4%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREG 324
           +GK   +S   D  M++Y  D ++  +E+L         ASY PD  ++V+   ESD   
Sbjct: 115 DGKLLYVS-SADGQMNLYRYDRETETSEQLAEYELGVFHASYGPDGDRMVYMSNESDDLT 173

Query: 325 KEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              +YV  ++GS+ +   +  D   ++F+  WS  G  +  +  + +K   GV   +   
Sbjct: 174 NMDVYVADADGSNPRNLELGIDGNETHFED-WSADGTKLLVSDNAADKTRSGVYDFESQS 232

Query: 383 ERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                +   ++    + P G   +  RK+D      +Y  D
Sbjct: 233 VEWFGDGEYVEDGVAFLPDGSGFLALRKRDAAVVPLVYDFD 273


>gi|114778624|ref|ZP_01453440.1| TolB protein, putative [Mariprofundus ferrooxydans PV-1]
 gi|114551089|gb|EAU53650.1| TolB protein, putative [Mariprofundus ferrooxydans PV-1]
          Length = 360

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 12/93 (12%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFS- 407
           +P  SP G  IAF+  +G    +  M  DGS E + + DS  +   P WS  G+ L+F+ 
Sbjct: 212 NPALSPDGKWIAFSMATGRSMHLFRMHPDGS-ELIQLTDSRSEDVQPAWSRDGQWLLFTS 270

Query: 408 -------RKKDGDTGSKLYSIDLNGRNETLINT 433
                  R  DG     ++ I  NGRN T + +
Sbjct: 271 NRSKPDLRHADGGQW-DIWRIGTNGRNLTQLTS 302


>gi|91794667|ref|YP_564318.1| transcriptional regulatory protein-like protein [Shewanella
           denitrificans OS217]
 gi|91716669|gb|ABE56595.1| transcriptional regulatory protein-like protein [Shewanella
           denitrificans OS217]
          Length = 691

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 1/117 (0%)

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +V  S  E K    V+  + ++++     K+A+Y  P W+  G+ + + K   EK  I  
Sbjct: 175 LVQSSSSEDKLNQVVLIDSATNKRTEITKKDANYLYPKWASNGEELLYLKCKREKCKIIK 234

Query: 376 MK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              K G    +L++D+ + +   S S + +  +   +G    ++ +ID N  N+TLI
Sbjct: 235 HNIKTGLMHTVLLKDNYIMSYDISKSNKIIAINYLHEGTNTIEVVTIDDNSSNKTLI 291


>gi|256379383|ref|YP_003103043.1| hypothetical protein Amir_5378 [Actinosynnema mirum DSM 43827]
 gi|255923686|gb|ACU39197.1| WD40 domain protein beta Propeller [Actinosynnema mirum DSM 43827]
          Length = 1066

 Score = 38.9 bits (89), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 20/152 (13%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNA-----TERLTNTLFINISASYSPDSSQIVFESDREG 324
           +RAL    + EA   YS D    A      E   ++   + SA+ SP     V      G
Sbjct: 64  QRALSGPDRGEAQPAYSPDGTRIAYVQWGVEAPPSSATPS-SATPSPAPGPPV-----TG 117

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKD-G 380
              L V  ++G+  + ++     +  +P WSP G  +A T  +G    + A G +  D  
Sbjct: 118 FAGLVVANADGTSPRVLNPGIGGA--EPTWSPDGTKLAVTTEAGIRVLRVADGAVLADVP 175

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           +   L   DS    P WSP G ++ F+R+ DG
Sbjct: 176 APPTLSARDSE---PAWSPDGTTIAFTRRIDG 204


>gi|238765079|ref|ZP_04626014.1| hypothetical protein ykris0001_18920 [Yersinia kristensenii ATCC
           33638]
 gi|238696696|gb|EEP89478.1| hypothetical protein ykris0001_18920 [Yersinia kristensenii ATCC
           33638]
          Length = 427

 Score = 38.9 bits (89), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 59/122 (48%), Gaps = 15/122 (12%)

Query: 310 SPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD S I     D +G  QL+++  NG + ++++  ++       W PQG  +AF   + 
Sbjct: 314 SPDGSAIACLMKDDQGVVQLWLVSPNGGEPRQLTFTEQGIQSAFSWHPQGHSLAFVCDN- 372

Query: 369 EKFAIGVMKKDGSQERL--LVEDSNLQ----APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                 VM+ D +  RL  L   S +     A  +SP G  + F R+ DG   ++L+++D
Sbjct: 373 -----SVMQCDSTTGRLQRLTTRSAIAPLADAVVFSPDGAKVAFMREIDGL--AQLFTVD 425

Query: 423 LN 424
           + 
Sbjct: 426 VG 427


>gi|193214091|ref|YP_001995290.1| peptidase S41 [Chloroherpeton thalassium ATCC 35110]
 gi|193087568|gb|ACF12843.1| peptidase S41 [Chloroherpeton thalassium ATCC 35110]
          Length = 1062

 Score = 38.9 bits (89), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 3/79 (3%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R  S  + A++ V +D   D+++V+       RLT  L      S SPD   I F S  E
Sbjct: 12  RHPSVFENAIVFVSED---DLWTVEASGGVARRLTAGLAECAFPSVSPDGKFIAFVSSEE 68

Query: 324 GKEQLYVMQSNGSDQKRIS 342
           G+  +Y+M   G   KR++
Sbjct: 69  GQPDVYLMPILGGQPKRLT 87


>gi|149916648|ref|ZP_01905150.1| peptidase S9, prolyl oligopeptidase active site region
           [Plesiocystis pacifica SIR-1]
 gi|149822365|gb|EDM81754.1| peptidase S9, prolyl oligopeptidase active site region
           [Plesiocystis pacifica SIR-1]
          Length = 725

 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 9/83 (10%)

Query: 352 PVWSPQGDLIAFTK-----FSGEKFA-IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSL 404
           P WSP G+ I FT       +GE+   I ++  DG+  R +   + +  +P W P GRS 
Sbjct: 53  PQWSPDGERILFTATRYDLAAGEQNTDIYLVHADGTGLRAMTRFEGSDGSPRWLPDGRSF 112

Query: 405 IF-SRKKDGDT-GSKLYSIDLNG 425
           +F S + D D+ G++L+ + ++G
Sbjct: 113 VFVSTRSDADSEGAQLWRMAIDG 135



 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 81/392 (20%), Positives = 146/392 (37%), Gaps = 102/392 (26%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY--QSITGEKGDFNS-RILFVSE--SVV 185
           WD  DR+  +       PA+ ++   TI D +Y  +S+   +   +  RILF +    + 
Sbjct: 20  WDFVDRRDPL------DPAARKREPFTI-DTLYALRSVGAPQWSPDGERILFTATRYDLA 72

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFE-----PRFSPNQQKVAY-ATYDDEDILRV 239
           +G     + ++  DG  +R +T       FE     PR+ P+ +   + +T  D D    
Sbjct: 73  AGEQNTDIYLVHADGTGLRAMT------RFEGSDGSPRWLPDGRSFVFVSTRSDADSEGA 126

Query: 240 YLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKR-ALISVQKDEAMD-------------- 283
            L    ID   P+R+    + + +P  S +G R A ++    E  D              
Sbjct: 127 QLWRMAIDGGEPERLTGVSTGVGSPEVSPDGARVAFVTTVFPEHGDDDLANAEAGTALAE 186

Query: 284 --------------------------IYSVDLQSNATERLTNTLF----INISASYSPDS 313
                                     I+ ++L+S A   +T   F       S ++SPD 
Sbjct: 187 NPIQAHIADDLLYRHWTAYADLQRSHIFVLELESGAVADVTPGDFDSPAFGGSFAFSPDG 246

Query: 314 SQIVFESDRE-----------------------GKEQLYVMQSNGSDQKRISQDKEASYF 350
            ++ FES+R+                       G      +    ++   I+   EA   
Sbjct: 247 KELCFESNRDPNNAQSWTTNKDLFVVPLVAEQAGPRGAAALAKAWAEPLNITDANEAYDG 306

Query: 351 DPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRS 403
            P +SP G  IAF +     +  ++  + V  ++  +  +L E  D+ +    W+P   S
Sbjct: 307 APAYSPDGRYIAFRRQAIPAYESDRARLAVYDRERGETTVLTEGFDNWVTDLAWAPDSAS 366

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +IF    +G T   L+ ++  G   T +  PA
Sbjct: 367 VIFEADVEGRT--PLFRVERAGGAITKLALPA 396


>gi|197105967|ref|YP_002131344.1| peptidase S9, prolyl oligopeptidase active site region
           [Phenylobacterium zucineum HLK1]
 gi|196479387|gb|ACG78915.1| peptidase S9, prolyl oligopeptidase active site region
           [Phenylobacterium zucineum HLK1]
          Length = 682

 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 5/103 (4%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRIS 342
           I+  DL + A   L      N +  +SPD +++ + S + G + QLYV         +++
Sbjct: 75  IWLADLSTGAQAPLVVDDGNNFAPRWSPDGTRLAYVSAQPGERPQLYVRWVASGRSAKVA 134

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF---SGEKFAIGVMKKDGSQ 382
             ++A   D  WSP G  +AFT      G+     + K DG++
Sbjct: 135 TLEQAPN-DIAWSPDGRTLAFTMIELDEGKPLGAPLKKPDGAK 176



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 53/103 (51%), Gaps = 12/103 (11%)

Query: 265 FSSNGKRALISVQKD-------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           F+++G+  L +  ++       +  ++Y VD+      RLT+ +  + +   SPD  +I 
Sbjct: 230 FTADGRGVLFASNRNPTWEREPQESEVYRVDIVDGRLTRLTSRVGPDAAPVPSPDGRRIA 289

Query: 318 F-ESDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWS 355
           F  +D +G+      LYVM ++G + ++++ + + S   P WS
Sbjct: 290 FVGNDDKGRSHEDSKLYVMDADGGNVRQLAANLDRSVGVPQWS 332



 Score = 36.6 bits (83), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 39/86 (45%), Gaps = 9/86 (10%)

Query: 352 PVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSL 404
           PV SP G  IAF        S E   + VM  DG   R L    D ++  P WS   RSL
Sbjct: 279 PVPSPDGRRIAFVGNDDKGRSHEDSKLYVMDADGGNVRQLAANLDRSVGVPQWSEDSRSL 338

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETL 430
            F     G T  K+  + L+GR ET+
Sbjct: 339 YFDYVDKGVT--KVARVSLDGRLETV 362


>gi|254418871|ref|ZP_05032595.1| peptidase, S9A/B/C family, catalytic domain protein [Brevundimonas
           sp. BAL3]
 gi|196185048|gb|EDX80024.1| peptidase, S9A/B/C family, catalytic domain protein [Brevundimonas
           sp. BAL3]
          Length = 692

 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 20/147 (13%)

Query: 309 YSPDSSQIVFESDREGKEQLY-----VMQSNG----SDQKRISQDKEASYFDPVWSPQGD 359
           ++P    IVF +   GK + +     + ++NG         ++QD  A    PV+SP G 
Sbjct: 239 FTPAGDSIVFSARLAGKTEPWSTNFDLWKTNGLTGDGTFTNLTQDNPAWDAGPVFSPDGR 298

Query: 360 LIAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDG 412
            +A+       F  +++ I +M     Q+R +  + +  A T  WS  G++L  +    G
Sbjct: 299 TLAYRAMARPGFEADRYQIVLMDVQSGQKREIASNWDRSADTLQWSRDGQTLYTTA---G 355

Query: 413 DTGS-KLYSIDLNGRNETLINTPAYAS 438
           D GS +L+++D      T +  P + S
Sbjct: 356 DVGSTRLFAVDTRNGVVTPVTGPGHVS 382


>gi|154280328|ref|XP_001540977.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150412920|gb|EDN08307.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 619

 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 17/135 (12%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L  T  +  P         +L  +     + A+IS ++ +     +VD++S A  +L  +
Sbjct: 365 LWATNANAIPAATWMLIHCVLDTQLQCRVRHAIISSKRKDG----TVDIESLAANKLVKS 420

Query: 301 LFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGS---DQKRISQDKEASYFDPVWSP 356
           LF+ I   Y S  S ++V E+   G    YV    G+     + I +D        VWSP
Sbjct: 421 LFLEILRVYVSSPSVRVVIETTELGG---YVFHKGGTIFIPGREIQKDPN------VWSP 471

Query: 357 QGDLIAFTKFSGEKF 371
            G     +KF  E+F
Sbjct: 472 NGSFPDASKFWAERF 486


>gi|124005883|ref|ZP_01690721.1| dipeptidyl peptidase IV (DPP IV) N-terminal region domain protein
           [Microscilla marina ATCC 23134]
 gi|123988566|gb|EAY28207.1| dipeptidyl peptidase IV (DPP IV) N-terminal region domain protein
           [Microscilla marina ATCC 23134]
          Length = 708

 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 21/128 (16%)

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           Y  D+ +   ++LTN     + AS+SPD S++ F  D      L+V+      + +I+ D
Sbjct: 100 YVYDISTKKLDKLTNQPGKQLHASFSPDGSKVAFVRD----NNLFVVDLATKKETQITND 155

Query: 345 KEASYF-----DPV------------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            + ++      D V            WSP    IAF KF   K     M++ G Q++   
Sbjct: 156 GQWNHIINGNADWVYEEEFSFSKAFFWSPDSKRIAFYKFDESKVKEYNMQRWGGQKQPYA 215

Query: 388 EDSNLQAP 395
            D   + P
Sbjct: 216 IDYRFKYP 223


>gi|330995271|ref|ZP_08319182.1| WD40-like protein [Paraprevotella xylaniphila YIT 11841]
 gi|329575988|gb|EGG57508.1| WD40-like protein [Paraprevotella xylaniphila YIT 11841]
          Length = 328

 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 47/217 (21%), Positives = 90/217 (41%), Gaps = 19/217 (8%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL--QSNATERL 297
           Y+    + R+ + IG F + IL    S++G +      ++   +I+  DL  Q ++ ++ 
Sbjct: 50  YVCMPEVKRSNRGIGWFSNRIL--DISTDGSQIAYLSFRNNTTNIFIKDLSKQGSSIQKT 107

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
             T  ++ S  YSPD  QIVF   R    Q++   +N     R        Y  P++S  
Sbjct: 108 NRTAVLDFS--YSPDGKQIVFSEARGKTNQIFQTSANKGFVCRQITTGNMDY-SPIYSAN 164

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            +LI F +   E  +I +   D     L      L    +   G       + +    S+
Sbjct: 165 MNLIFFAR--QENKSISIWSHDMKNNFLANYSQGLNP--YPVKGEPAFICVRPNAAGHSE 220

Query: 418 LYSIDL-NGRNETLIN-------TPAYASDPQWVGFM 446
           ++ ++   G  E +++       +P+ + D QW+ F+
Sbjct: 221 IWKVNYETGVEECIVSQPDRDFTSPSISPDGQWLLFV 257


>gi|238757301|ref|ZP_04618487.1| hypothetical protein yaldo0001_32180 [Yersinia aldovae ATCC 35236]
 gi|238704340|gb|EEP96871.1| hypothetical protein yaldo0001_32180 [Yersinia aldovae ATCC 35236]
          Length = 433

 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 7/107 (6%)

Query: 310 SPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD S I     D  G  QL+++  NG + ++++  +        W PQGD +AF     
Sbjct: 320 SPDGSAIACLMKDDNGMVQLWLVSPNGGEPRQLTSCQGGIQSAFSWRPQGDCLAFVC--- 376

Query: 369 EKFAIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDG 412
           +   +    + G   RL    V      A  +SP G  + F R+ DG
Sbjct: 377 DNSVMLCESRSGQLHRLTARSVATPLADAVVFSPDGNKVAFMREIDG 423


>gi|226949209|ref|YP_002804300.1| putative lipoprotein [Clostridium botulinum A2 str. Kyoto]
 gi|226842597|gb|ACO85263.1| putative lipoprotein [Clostridium botulinum A2 str. Kyoto]
          Length = 357

 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 74/164 (45%), Gaps = 20/164 (12%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQLYVM 331
           S+Q  E M IY  DL++    ++ + + ++ S     +  +I++    S++E K ++Y  
Sbjct: 139 SLQSAEGMKIY--DLENKKEIKIKSDVLVSGSLFKWLNEDEILYYGINSEKENKAKIY-- 194

Query: 332 QSNGSDQKRISQDKEASYFDPV------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                 +  + ++KE  Y D +      + P GD +      G+KF +    K  +  + 
Sbjct: 195 ------KYNVKENKEEVYVDNIEGICTYFMPNGDNVLLLSRQGDKFNLSYYNKKDNSFKK 248

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           + E+ N Q    + S +++ F  K D +    LY ID N  N T
Sbjct: 249 ISEEVN-QIYKGTKSTKNMYFLGKNDLENKDYLYKIDGNTLNLT 291


>gi|21232747|ref|NP_638664.1| hypothetical protein XCC3318 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767180|ref|YP_241942.1| hypothetical protein XC_0847 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21114563|gb|AAM42588.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572512|gb|AAY47922.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 784

 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 60/127 (47%), Gaps = 6/127 (4%)

Query: 305 ISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDL 360
           +S S+SPD   ++F +     G  ++  ++      + ++       FD  P +SP G  
Sbjct: 331 LSFSWSPDGRALLFGTMTGAHGARRIRRLELETGQWQTLAYSAHPDDFDYMPRYSPDGAW 390

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           I F +         +  + G+ ERL  + + ++  +W P    +IF R+ D +  ++LY 
Sbjct: 391 IVFMRNPQMGDLWRMPAQGGTPERLTDDIAEIRGWSWLPDSSGVIFGRRVDSE--ARLYR 448

Query: 421 IDLNGRN 427
           ++L+ R+
Sbjct: 449 LELHDRS 455


>gi|332711762|ref|ZP_08431693.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332349740|gb|EGJ29349.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1142

 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 40/232 (17%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D  G  I  +T  +D + +   FSP+ QK+A A+ D     R++      D     I 
Sbjct: 561 IWDNQGNQIAVITGHQDSV-WSIAFSPDGQKLATASRDK--TARIW------DNQGHEIS 611

Query: 255 NFRS---MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             R    ++ +  FS +G+R L +   D+   I+  DLQ N    LT       S ++SP
Sbjct: 612 VLRGHQDVVWSVAFSPDGQR-LATASDDKTARIW--DLQGNQIALLTGHQSRVNSVAFSP 668

Query: 312 DSSQIVFESDREGKE-------QLYVMQSN---------GSDQKRI---SQDKEASYFDP 352
           D  ++   SD +          Q+ V+  +           D +R+   S DK A     
Sbjct: 669 DGQKLATVSDDKTARIWDNQGNQIAVLTGHQDSVWSVAFSPDGQRLATGSDDKTAR---- 724

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           +W  QG+ IA    +G +F +  +      +RL     +  A  W   G  +
Sbjct: 725 IWDNQGNQIAL--LTGHQFRVNSIAFSLDGQRLATGSRDNTARIWDNQGNQI 774


>gi|116622781|ref|YP_824937.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225943|gb|ABJ84652.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 890

 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 79/192 (41%), Gaps = 17/192 (8%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++L D R DR   +I +      +P+F   GKR L  V+K  A +++  +L S  +E L 
Sbjct: 606 IWLHDGRGDR---QI-SLEGYAFSPKFIPGGKRLLYRVRKGSASELWVAELDSGRSEPLL 661

Query: 299 NTLFINISA-------SYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYF 350
               +  +          S D  Q++  S D  GK +L++   + +   R  Q   A   
Sbjct: 662 PGFAVATAGDGSLGGYDVSADGRQVLMASRDSAGKTRLWLAPLDRASAPR--QIPNAEGE 719

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            PV+   G++  F    G    +  +++DGS  R   +   +  P  SP    L  S   
Sbjct: 720 QPVFGSTGEVF-FRGIQGTSAFLYRVQQDGSGLRKASDVPIVGIPGASPDRNWLPLSSHT 778

Query: 411 DGDTGSKLYSID 422
            G  G  L+  D
Sbjct: 779 TG--GMVLFRTD 788


>gi|307607781|emb|CBI44152.1| putative acylaminoacyl-peptidase fragment [Bacillus
           amyloliquefaciens DSM 7]
          Length = 489

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 28/163 (17%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQ-LYVMQSNGSDQKR 340
           + L++   ++LT+    +  A++SPD  Q+ F     E    GK + +Y+M     D K+
Sbjct: 3   IHLETGEIQQLTDHEADHFDAAFSPDGKQLAFTANLCEPGDAGKPRDVYLMNLADGDLKQ 62

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK---DGSQERL------------ 385
           I+     S+   V+SP G  IA      E     ++K    D   ERL            
Sbjct: 63  ITP-HSGSFGSCVFSPDGSYIALLGHENEFRNATLVKAWLYDVKNERLSCLTDMLDVHLS 121

Query: 386 --LVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             L+ DS +      P W+  G+       + G TG    SID
Sbjct: 122 DALIADSLIGGVTPRPVWTNDGQGFYVLGSEQGSTGIYYISID 164


>gi|33321858|gb|AAQ06664.1| antigen P49Hb65 [Helicobacter bilis]
          Length = 428

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 66/368 (17%), Positives = 153/368 (41%), Gaps = 21/368 (5%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           + +++ +DL+    FN+   D+ K  I   +     QD+ +     +      K+G   L
Sbjct: 57  IYKMLVQDLKTLGHFNVYYDDTLKTDILQNN--LALQDYKNKNMNFIAQVSQKKKGGS-L 113

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
                L++    K I  +        +  IAH ++  +   I     D+ +R +  S  V
Sbjct: 114 IATLSLYEYASGKTITTEYREDETERYPFIAHAMASYLNDCIKAPNADWLNRYVVFSNYV 173

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            SG  ++++ + D      + +  +   +   P+++ ++Q+  Y T    +   +Y  + 
Sbjct: 174 GSG--RSNILIADYTFTYQKTIISNGLNMF--PKWADSKQEEFYYTLVTHEA-TIYKYNM 228

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  K I + + M +    S +G + L+S+      DI+  +++S    +LT    I+
Sbjct: 229 YSGKNEKVISS-QGMAVVSDVSKHGDKLLLSLAPVGLSDIFLYEVKSKKLTQLTRYSGID 287

Query: 305 ISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           ++A ++ +    VF SDR G   +++  +  N +  + + + +  S      S  G  I 
Sbjct: 288 VNAHFTNNEKSFVFVSDRLGYPNIFMQDLMPNANVTQIVFKGRNNS----TLSTFGQYIV 343

Query: 363 FTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           ++    ++      F + ++       R L +    + P +S  G S++F R++  +   
Sbjct: 344 YSSRESDEETGLNVFNLYLVSAHSDYVRRLSKIGTNRIPAFSHDGDSIMFLRQQKNEQAI 403

Query: 417 KLYSIDLN 424
            +  + +N
Sbjct: 404 GIIRLSIN 411


>gi|82703420|ref|YP_412986.1| peptidase S9, prolyl oligopeptidase active site region
           [Nitrosospira multiformis ATCC 25196]
 gi|82411485|gb|ABB75594.1| Peptidase S9, prolyl oligopeptidase active site protein
           [Nitrosospira multiformis ATCC 25196]
          Length = 615

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           + AS+S D  +I+F S+  G    Y +   G   + ++     + F   + P  D +  T
Sbjct: 16  MGASFSADEERILFSSNESGIFNAYTLPVTGGTAEALTCSASDTTFSVSFFPHDDRVLIT 75

Query: 365 K-FSG-EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSL 404
           + + G E + + ++  DG +E L   E    Q   WSP G++ 
Sbjct: 76  RDYHGDENYHLFLLAPDGEEEDLTPGEKLKAQFMGWSPDGQAF 118


>gi|117921499|ref|YP_870691.1| transcriptional regulator domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117613831|gb|ABK49285.1| transcriptional regulator domain protein [Shewanella sp. ANA-3]
          Length = 716

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 127/285 (44%), Gaps = 30/285 (10%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYATYD 232
           ++++ F S S  +G  K ++  +      +  L P S D    +   SP+ Q +AY +  
Sbjct: 244 DTKLFFASRSHATG--KCTITQLTLATNEMLALAPCSTDMAAID--ISPDGQYLAYISSH 299

Query: 233 DED----ILRVYLMDTRIDRAPKRIG-----NFRSMILAPRFSSNGKRALISVQ-KDEAM 282
           + D    I R+ L   + D   +R+      N+    LA  FS +GK   I+ +  + + 
Sbjct: 300 EADKVGGIYRLTL--AKADATAERLSCESQCNYEDRDLA--FSPDGKWLAIARRFSNISE 355

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DI+  DL +   +RLT  L      S++P+S  +VF ++  G    + +    +  + + 
Sbjct: 356 DIFIRDLANANEKRLTQGLEDIRGLSWTPNSQALVFATEDSGSRNGFTIDIETAHIRPL- 414

Query: 343 QDKEASYFDPVWSPQGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            D E   +    S +G+L+      +F    F++G  K  GS   LL    + + P +SP
Sbjct: 415 -DVEGMSYPSSVSDEGELVYHQYRRQFQMAYFSLGD-KVPGSLFPLLYSGISHRNPHYSP 472

Query: 400 SGRSLIFSRKKDGDTG-SKLYSIDLNGRN-ETLINTPAYASDPQW 442
               ++F      DTG +++++ D+ G+  E      +  + P+W
Sbjct: 473 EAGRIVFV---SSDTGYNEIWTSDIKGQKLEQHTQLKSRVAYPRW 514



 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 18/234 (7%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           I   + + D   AN + LT   + I     ++PN Q + +AT +D      + +D  I+ 
Sbjct: 353 ISEDIFIRDLANANEKRLTQGLEDIR-GLSWTPNSQALVFAT-EDSGSRNGFTID--IET 408

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-- 306
           A  R  +   M      S  G+      ++   M  +S  L       L   L+  IS  
Sbjct: 409 AHIRPLDVEGMSYPSSVSDEGELVYHQYRRQFQMAYFS--LGDKVPGSLFPLLYSGISHR 466

Query: 307 -ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT- 364
              YSP++ +IVF S   G  +++     G   ++ +Q K    + P WSP G  IAF  
Sbjct: 467 NPHYSPEAGRIVFVSSDTGYNEIWTSDIKGQKLEQHTQLKSRVAY-PRWSPDGSKIAFIA 525

Query: 365 ---KFSGEK-FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
              +  G + F + +  K+ +   L     N   P+W+  G + +F+   DG T
Sbjct: 526 PDDRNEGNRIFILDLTNKNITA--LASSYHNHGRPSWNWQG-TAVFASTSDGIT 576


>gi|300775443|ref|ZP_07085305.1| dipeptidyl peptidase IV N [Chryseobacterium gleum ATCC 35910]
 gi|300506183|gb|EFK37319.1| dipeptidyl peptidase IV N [Chryseobacterium gleum ATCC 35910]
          Length = 1063

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 57/148 (38%), Gaps = 7/148 (4%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +P  S +GK A  S   D    I+ VD       R+T      I+   SPD   + F S+
Sbjct: 28  SPSLSPDGKTAYFSYDGD----IWRVDSNGGNASRITALDGEEINPRVSPDGKWLAFSSN 83

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           + G   LYVM S G   K+++        +  WS     I FT      F       +G 
Sbjct: 84  QYGNYDLYVMPSEGGTIKQLTFHTGKDEIEN-WSWDSKTIYFTSNRNNNFGSFKTTIEGK 142

Query: 382 QERLLVED--SNLQAPTWSPSGRSLIFS 407
             + L  +  +N      +P+G  L  S
Sbjct: 143 TPQKLFNNYFNNTNGLAETPAGEYLFTS 170



 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS N +  L S +++  +DI+  +++   T  LTNT        +SP+   I F SDR
Sbjct: 440 PSFSPNNEYVLFSAKRNFELDIFIYNIKKGQTLNLTNTGVSEEDPVWSPNGKYIYFASDR 499


>gi|91216587|ref|ZP_01253553.1| protease, putative [Psychroflexus torquis ATCC 700755]
 gi|91185381|gb|EAS71758.1| protease, putative [Psychroflexus torquis ATCC 700755]
          Length = 1099

 Score = 38.5 bits (88), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+++V L     +RLT         S SPD   I F +  EG  ++Y M  +G    R +
Sbjct: 52  DLWTVPLNGGLAQRLTTHQEEENFPSISPDGKTIAFSASYEGPVEVYTMPISGGLPIRWT 111

Query: 343 QDKEASYFDPVWSPQGDLIAFTK 365
            +++ S  +  W+P G +I  T+
Sbjct: 112 YERDVSITNS-WTPDGKIIYNTR 133


>gi|226228052|ref|YP_002762158.1| putative S9C family serine peptidase [Gemmatimonas aurantiaca T-27]
 gi|226091243|dbj|BAH39688.1| putative S9C family serine peptidase [Gemmatimonas aurantiaca T-27]
          Length = 688

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 59/126 (46%), Gaps = 20/126 (15%)

Query: 295 ERLTNTLFIN----ISASYSPDSSQIVFE-------SDREGKEQLYVMQSNGSDQKRISQ 343
           +RLT   + N     + + SPD  QI++        +DR  +  +++M ++G+  + + +
Sbjct: 40  DRLTIADYFNWEDVAAPALSPDGKQILYTRTWTDQLNDRR-ESSVWIMNADGTKNRFLVK 98

Query: 344 DKEASYFDPVWSPQGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
              A      WSP+G  IAF    + SG++  +  M  +G+  ++     +     WSP 
Sbjct: 99  GSNAK-----WSPEGSRIAFIANGEPSGQQIWVRYMDAEGATTQITRLTESPGDVEWSPD 153

Query: 401 GRSLIF 406
           G +L F
Sbjct: 154 GTTLAF 159


>gi|298249795|ref|ZP_06973599.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297547799|gb|EFH81666.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 703

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 65/164 (39%), Gaps = 22/164 (13%)

Query: 263 PRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P  S +G++   ++      Q+  +  I+ VD Q                AS+SPD  ++
Sbjct: 92  PAISPDGRQVAYTLWSFEGEQQKRSGRIWLVDTQGGEPVPFGGNNKSEWGASWSPDGKEL 151

Query: 317 VFES-DREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--- 371
            F + D E +  QL+V   +G  + R          +P+WSP G  I F   +G++    
Sbjct: 152 AFMALDGEPELPQLFVRALDGKSKARRICSMSRGLEEPIWSPDGSHIGFLARTGQEPDKD 211

Query: 372 ----------AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSL 404
                      +  + + G   R L  E+  +    WSP G+ +
Sbjct: 212 PLVLAPASHQRLWAVHRHGDTPRPLTQENITVWEYAWSPDGKHV 255



 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 18/155 (11%)

Query: 264 RFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-S 320
           RFS   KR+ +     K E+  I  + +QS   E L  T F    A  SPD  Q+ +   
Sbjct: 52  RFSFLEKRSFVVRDTNKHESF-IPRIPVQS---ETLFATYFPATPA-ISPDGRQVAYTLW 106

Query: 321 DREGKEQ-----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----KF 371
             EG++Q     ++++ + G +      + + S +   WSP G  +AF    GE    + 
Sbjct: 107 SFEGEQQKRSGRIWLVDTQGGEPVPFGGNNK-SEWGASWSPDGKELAFMALDGEPELPQL 165

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +  +       R+      L+ P WSP G  + F
Sbjct: 166 FVRALDGKSKARRICSMSRGLEEPIWSPDGSHIGF 200


>gi|268315847|ref|YP_003289566.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Rhodothermus marinus DSM 4252]
 gi|262333381|gb|ACY47178.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Rhodothermus marinus DSM 4252]
          Length = 686

 Score = 38.5 bits (88), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 16/108 (14%)

Query: 310 SPDSSQIVF-------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           SPD  +IVF       + DR  +  L++M ++GS Q+ + + +      P WSP G  IA
Sbjct: 42  SPDGRRIVFTRRWVDQQKDRW-QSALWIMNADGSQQRFLVEGRS-----PRWSPDGTRIA 95

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFS 407
           F     E      +K     E         +AP   TWSP GR + F+
Sbjct: 96  FIANDAEGRPQIFVKWVDLPEPPTQLTHLTEAPGSITWSPDGRMIAFT 143



 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 9/62 (14%)

Query: 351 DPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           DP  SP G  I FT+   ++       A+ +M  DGSQ+R LVE    ++P WSP G  +
Sbjct: 38  DPQISPDGRRIVFTRRWVDQQKDRWQSALWIMNADGSQQRFLVEG---RSPRWSPDGTRI 94

Query: 405 IF 406
            F
Sbjct: 95  AF 96


>gi|193215349|ref|YP_001996548.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Chloroherpeton thalassium ATCC 35110]
 gi|193088826|gb|ACF14101.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Chloroherpeton thalassium ATCC 35110]
          Length = 631

 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 6/129 (4%)

Query: 309 YSPDSSQIVF--ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           + P    I+F  ++   G  QLY+++ NGSD KRI+    A Y    +S  G  +A+   
Sbjct: 95  WVPKHELILFGAKTGAAGTTQLYLIKPNGSDLKRITSKDSAEYRFKAFSNDGKWMAYEAN 154

Query: 367 SGEKFAIGV--MKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           + +   +    M  +  + RL+  ED  ++  ++SP    L+ S K +    + LY  DL
Sbjct: 155 ARKANILDAYTMNLETLERRLIAAEDDCVRPISFSPDASYLLLS-KGNQAVNNDLYLADL 213

Query: 424 NGRNETLIN 432
               + L+ 
Sbjct: 214 KTLKQVLLT 222


>gi|242072218|ref|XP_002446045.1| hypothetical protein SORBIDRAFT_06g000930 [Sorghum bicolor]
 gi|241937228|gb|EES10373.1| hypothetical protein SORBIDRAFT_06g000930 [Sorghum bicolor]
          Length = 730

 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 20/124 (16%)

Query: 260 ILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYS 310
           I AP ++ N  + ++      S    + ++I ++   S+ T +   LT   F N   S S
Sbjct: 436 IFAPMWNQNPDKDILYVCMGPSFNAGKPLEICAIPNVSSGTRQRRQLTKGKFNNAFPSSS 495

Query: 311 PDSSQIVFESDREGKEQ----LYVMQS------NGSDQKRISQDKEASYFDPVWSPQGDL 360
           PD S+ VF S R+G ++    LY+ +       +G    R++ + E +     WSP+GD 
Sbjct: 496 PDGSRFVFRSTRDGGDKKHKNLYIAEDAEVGEYSGGTVTRLT-NGEWTDTHCQWSPRGDW 554

Query: 361 IAFT 364
           I F+
Sbjct: 555 IVFS 558


>gi|212634703|ref|YP_002311228.1| peptidase S9, prolyl oligopeptidase active site region:WD40-like
           Beta Propeller [Shewanella piezotolerans WP3]
 gi|212556187|gb|ACJ28641.1| Peptidase S9, prolyl oligopeptidase active site region:WD40-like
           Beta Propeller [Shewanella piezotolerans WP3]
          Length = 694

 Score = 38.5 bits (88), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +I+ VD   N T  +TN L  + S   SPD++++ + S   G  Q+++         ++S
Sbjct: 80  NIWKVDKDKNLTP-VTNGLHSDFSPVLSPDNTKLAYISTASGSAQIHMQWLETGASGQMS 138

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF 366
               A   +  WSP G  +AFT+F
Sbjct: 139 HLDHAP-SNISWSPDGKYLAFTRF 161


>gi|254786855|ref|YP_003074284.1| lipoprotein [Teredinibacter turnerae T7901]
 gi|237687152|gb|ACR14416.1| putative lipoprotein [Teredinibacter turnerae T7901]
          Length = 394

 Score = 38.5 bits (88), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 47/238 (19%), Positives = 98/238 (41%), Gaps = 45/238 (18%)

Query: 250 PKRIGNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           P +I     + + P+FS NGK  + +S  +D     + V  +      L++      S +
Sbjct: 117 PTKIYENPGLEVQPKFSPNGKIISYVSRNRDNQQLSFLVPGREEPLVVLSSKEIT--SYA 174

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------------------DKEASYF 350
           +SPDSSQ+    + E    + V+Q+    +K + +                   K+ +Y 
Sbjct: 175 WSPDSSQLAIAYNDETHSYIDVVQTADQSRKTLQRILLEGPADSAPATDTDNFQKQFAYV 234

Query: 351 DPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIF- 406
              WSP  D IAF +    +    + VM  +G  + +   ++ +Q   +W+ +G  L++ 
Sbjct: 235 S--WSPAADKIAFIRHPRHRGTRQLWVMPLNGEPQLISPPEAQVQDGISWNSAGDHLLYS 292

Query: 407 ------------SRKKDGDTGSKLYSIDLNG------RNETLINTPAYASDPQWVGFM 446
                       S++K  + G  ++   + G      +++ +   P Y+ D Q + ++
Sbjct: 293 ALLGYKFYWDEASQRKIYEGGMHIFEYQVGGNSKQLTKHDHMFKNPTYSPDEQQIAYL 350


>gi|127511424|ref|YP_001092621.1| peptidase S9 prolyl oligopeptidase [Shewanella loihica PV-4]
 gi|126636719|gb|ABO22362.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella loihica PV-4]
          Length = 675

 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 3/73 (4%)

Query: 375 VMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET--LI 431
           +  +DG Q+R L      +  P +SP  ++L F  K+D D   ++Y + ++G  E   L 
Sbjct: 69  LFSQDGKQQRALTAKGMRVSEPVFSPDSKTLAFISKRDKDEAGQIYLLPMDGPGEAQRLT 128

Query: 432 NTPAYASDPQWVG 444
           + P+     +WVG
Sbjct: 129 DVPSGVYGLKWVG 141


>gi|311030850|ref|ZP_07708940.1| WD-40-like beta propeller repeat-containing protein [Bacillus sp.
           m3-13]
          Length = 349

 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 15/135 (11%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAF- 363
           + + SPD   IVF   + G   LY    +GS+  +++  + E S+  P +S  GD I F 
Sbjct: 45  TVTLSPDDKSIVFPFYQSGDGALYKANVDGSNVNQLTYPRQEESHVHPRYSSNGDKILFL 104

Query: 364 TKFSGEKF---AIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKK--------- 410
           ++  GE     ++ +M  DGS+  RL  E+  +    +S   +++ +   K         
Sbjct: 105 SQEKGENTLTRSLYIMNSDGSELTRLSKENELITDAIFSQDDQTIFYLAAKHYQEGNEME 164

Query: 411 DGDTGSKLYSIDLNG 425
           +G T   LYSI + G
Sbjct: 165 EGPTNIDLYSISITG 179



 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 34/268 (12%)

Query: 192 SLCVMDRDGANIRYLT-PSRDQILFEPRFSPNQQKVAYATYDD-EDILR--VYLMDTRID 247
           +L   + DG+N+  LT P +++    PR+S N  K+ + + +  E+ L   +Y+M++   
Sbjct: 66  ALYKANVDGSNVNQLTYPRQEESHVHPRYSSNGDKILFLSQEKGENTLTRSLYIMNSDGS 125

Query: 248 RAPKRIGNFRSMILAPRFSSNGKR----ALISVQKDEAM-------DIYSVDLQSNATER 296
               R+     +I    FS + +     A    Q+   M       D+YS+ +  +  ER
Sbjct: 126 EL-TRLSKENELITDAIFSQDDQTIFYLAAKHYQEGNEMEEGPTNIDLYSISITGDKKER 184

Query: 297 LTNTLFINI-SASYSPDSSQIVF-ESDREGKEQLY----VMQSNGSDQKRISQDKEAS-Y 349
           LT+   +   S S + D  ++ + E  +E ++ L+    VM +   +++ ++ D   +  
Sbjct: 185 LTHDESLKKRSLSLTEDGGKLGYVEWSKEEEKGLHSSFIVMDTQTMEKEYVNPDFNTNII 244

Query: 350 FDPVWSPQGDLIAFTKFSG---EK----FAIGVMKKDGSQERLLVEDSNL-QAPTWSPSG 401
           +    SP GDLIAF+  S    EK    + +  M   G + + L     L   P +    
Sbjct: 245 YSGKLSPTGDLIAFSAASENPREKSQFIYEMYTMSTSGKEVQPLTSFRTLITEPVFFRDK 304

Query: 402 RSLIFSRKKD---GDTGSKLYSIDLNGR 426
             ++F + +    G    KL+++D+NG 
Sbjct: 305 ERVLFIQDQSWLRGKPNYKLWAVDINGE 332


>gi|149200423|ref|ZP_01877439.1| MdsD protein, putative [Lentisphaera araneosa HTCC2155]
 gi|149136492|gb|EDM24929.1| MdsD protein, putative [Lentisphaera araneosa HTCC2155]
          Length = 1121

 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +P  S NG + + S   D    I+    +    +R+T +  ++    +S D  +I FES+
Sbjct: 26  SPSLSPNGSQVIFSWNDD----IWISSSEGGLAKRMTQSKGLDYRPMFSHDGKKIAFESN 81

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEA 347
           R G   L+VM + G   K++S + E 
Sbjct: 82  RLGPTYLFVMPTVGGPAKQVSFNSEG 107


>gi|110598068|ref|ZP_01386347.1| WD40-like Beta Propeller [Chlorobium ferrooxidans DSM 13031]
 gi|110340327|gb|EAT58821.1| WD40-like Beta Propeller [Chlorobium ferrooxidans DSM 13031]
          Length = 334

 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 79/190 (41%), Gaps = 34/190 (17%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-------GKEQLYVMQSNG 335
           +I+   L  +   +LT +   +   + SPD  ++ F    E       G  QL+++++ G
Sbjct: 42  NIWIARLDGSGQRQLTGS-GRDTHPALSPDGKEVAFCRRTETEIYPDTGFGQLFMVETKG 100

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--------GEKFAIGVM-----KKDGSQ 382
              +++  +   +  DP +SP G  + F   S        GE  A   M     +    +
Sbjct: 101 GTPRKVRFEGVLAAEDPAFSPDGKSLLFVGLSELRRAGKKGELQAFATMSITIGESRTGK 160

Query: 383 ERLLVEDSN--LQA------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            R +V+  N  L A      P +SP G+S+++ ++   D       IDLNG+   L   P
Sbjct: 161 CRPVVQRKNSMLDAGYIYSNPAFSPDGKSILW-QESGSDVSGGFAIIDLNGKR--LFRYP 217

Query: 435 AYASD--PQW 442
              SD  P W
Sbjct: 218 LKGSDFTPYW 227


>gi|312131782|ref|YP_003999122.1| peptidase s41 [Leadbetterella byssophila DSM 17132]
 gi|311908328|gb|ADQ18769.1| peptidase S41 [Leadbetterella byssophila DSM 17132]
          Length = 1064

 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 19/60 (31%), Positives = 29/60 (48%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y V        +LT     +    +SPD  QI F SDR G   L++M + G +  R++
Sbjct: 45  DLYKVPSAGGQATQLTFHEAHDYQPVWSPDGKQIAFASDRYGNFDLFIMNAQGGEATRLT 104


>gi|108762084|ref|YP_630642.1| hypothetical protein MXAN_2422 [Myxococcus xanthus DK 1622]
 gi|108465964|gb|ABF91149.1| hypothetical protein MXAN_2422 [Myxococcus xanthus DK 1622]
          Length = 1225

 Score = 38.1 bits (87), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 9/146 (6%)

Query: 262 APRFSSNGK-RALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIV 317
           +P FS +G+  A I +      DIY++DLQ+       +LT+ +F     ++ P  S IV
Sbjct: 633 SPAFSPDGRWVAFIGINDAGLRDIYAIDLQAGPDAPPLQLTDDVFSEREVTWGP--SGIV 690

Query: 318 FESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           F SD     Q  L+ ++ +   Q      +E  +  PV    G L  FT F+     +  
Sbjct: 691 FTSDATSHRQFNLFRVRPDAPRQVERLTSEERDHTAPVALADGRLF-FTAFNNSSSDLHE 749

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSG 401
           + KDG   R     + +  P   P G
Sbjct: 750 LTKDGRIVRRTDLTTGVFEPGPGPDG 775


>gi|150008116|ref|YP_001302859.1| putative peptidase [Parabacteroides distasonis ATCC 8503]
 gi|149936540|gb|ABR43237.1| putative peptidase [Parabacteroides distasonis ATCC 8503]
          Length = 703

 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 13/164 (7%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKE 326
           GK   IS   D    IY  DL +  T  +T      + + +YSPD   I + S +R+G E
Sbjct: 263 GKEYAISTNSD----IYVYDLNTKQTTNITEENKGYDTNPTYSPDGKSIAWLSMERDGYE 318

Query: 327 ----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGS 381
               +L VM     ++  +S+D +++     WS     I FT  + GE     +   +G+
Sbjct: 319 ADQNRLMVMNLETGEKTFVSKDFDSNVDSYCWSADCKRIYFTGVWHGESQVYQIDLANGN 378

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +   L E     A   +  G  LI +++     G ++YSIDL G
Sbjct: 379 KITPLTEGMYDYASV-ALLGDKLI-AQRHSMSMGDEIYSIDLTG 420



 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 24/96 (25%), Positives = 47/96 (48%), Gaps = 9/96 (9%)

Query: 266 SSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GKR + +V      +     +++ ++   +  +++T T F    A +    ++I F 
Sbjct: 65  SPDGKRVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTGFAENEAVWIKGGTKIAFL 124

Query: 320 SDREGKEQLYVMQSNGSDQKRIS---QDKEASYFDP 352
            +  G  QL+ M  +G+D+KR+S   +D E   F P
Sbjct: 125 CNESGSSQLWEMNPDGTDRKRLSDYDKDIEGFAFSP 160


>gi|301309779|ref|ZP_07215718.1| prolyl oligopeptidase family protein [Bacteroides sp. 20_3]
 gi|300831353|gb|EFK61984.1| prolyl oligopeptidase family protein [Bacteroides sp. 20_3]
          Length = 703

 Score = 38.1 bits (87), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 13/164 (7%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKE 326
           GK   IS   D    IY  DL +  T  +T      + + +YSPD   I + S +R+G E
Sbjct: 263 GKEYAISTNSD----IYVYDLNTKQTTNITEENKGYDTNPTYSPDGKSIAWLSMERDGYE 318

Query: 327 ----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGS 381
               +L VM     ++  +S+D +++     WS     I FT  + GE     +   +G+
Sbjct: 319 ADQNRLMVMNLETGEKTFVSKDFDSNVDSYCWSADCKRIYFTGVWHGESQVYQIDLANGN 378

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +   L E     A   +  G  LI +++     G ++YSIDL G
Sbjct: 379 KITPLTEGMYDYASV-ALLGDKLI-AQRHSMSMGDEIYSIDLTG 420



 Score = 36.6 bits (83), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 9/96 (9%)

Query: 266 SSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GK+ + +V      +     +++ ++   +  +++T T F    A +    ++I F 
Sbjct: 65  SPDGKKVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTGFAENEAVWIKGGTKIAFL 124

Query: 320 SDREGKEQLYVMQSNGSDQKRIS---QDKEASYFDP 352
            +  G  QL+ M  +G+D+KR+S   +D E   F P
Sbjct: 125 CNESGSSQLWEMNPDGTDRKRLSDYDKDIEGFAFSP 160


>gi|262381309|ref|ZP_06074447.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262296486|gb|EEY84416.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 703

 Score = 38.1 bits (87), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 46/164 (28%), Positives = 73/164 (44%), Gaps = 13/164 (7%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKE 326
           GK   IS   D    IY  DL +  T  +T      + + +YSPD   I + S +R+G E
Sbjct: 263 GKEYAISTNSD----IYVYDLNTKQTTNITEENKGYDTNPTYSPDGKSIAWLSMERDGYE 318

Query: 327 ----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGS 381
               +L VM     ++  +S+D +++     WS     I FT  + GE     +   +G+
Sbjct: 319 ADQNRLMVMNLETGEKTFVSKDFDSNVDSYCWSADCKRIYFTGVWHGESQVYQIDLANGN 378

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +   L E     A   +  G  LI +++     G ++YSIDL G
Sbjct: 379 KITPLTEGMYDYASV-ALLGDKLI-AQRHSMSMGDEIYSIDLTG 420



 Score = 36.6 bits (83), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 47/96 (48%), Gaps = 9/96 (9%)

Query: 266 SSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GK+ + +V      +     +++ ++   +  +++T T F    A +    ++I F 
Sbjct: 65  SPDGKKVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTGFAENEAVWIKGGTKIAFL 124

Query: 320 SDREGKEQLYVMQSNGSDQKRIS---QDKEASYFDP 352
            +  G  QL+ M  +G+D+KR+S   +D E   F P
Sbjct: 125 CNESGSSQLWEMNPDGTDRKRLSDYDKDIEGFAFSP 160


>gi|240279863|gb|EER43368.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
 gi|325092992|gb|EGC46302.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
          Length = 583

 Score = 38.1 bits (87), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 13/133 (9%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L  T  +  P         +L  +     +RA+IS ++ +     +VD++S A  +L  +
Sbjct: 329 LWATNANAIPAATWMLIHCVLDTQLQCRVRRAIISSKRKDG----TVDIESLAANKLVKS 384

Query: 301 LFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQG 358
           LF+ I   Y S  S ++V E+   G    YV    G+    I         DP VWSP G
Sbjct: 385 LFLEILRVYVSSPSVRLVLETTELGG---YVFHKGGT----IFIPGREMQNDPNVWSPNG 437

Query: 359 DLIAFTKFSGEKF 371
                ++F  E+F
Sbjct: 438 SFPDASEFWAERF 450


>gi|260174446|ref|ZP_05760858.1| prolyl oligopeptidase family protein [Bacteroides sp. D2]
 gi|315922713|ref|ZP_07918953.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696588|gb|EFS33423.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 700

 Score = 38.1 bits (87), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 22/161 (13%)

Query: 283 DIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKE----QLYVMQSNGS 336
           DIY  DL +  TE +T      + +  YSPD   I ++S +R+G E    +L++M     
Sbjct: 269 DIYVYDLNTKKTENITEENKGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETG 328

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +++ +S+  E++    VW     +I FT         GV   +     L + + +++A T
Sbjct: 329 EKRFVSKTFESNVDAFVWGADAKVIYFT---------GVWHGESQIYALDLANDSVKAIT 379

Query: 397 ---WSPSGRSL----IFSRKKDGDTGSKLYSIDLNGRNETL 430
              +   G +L    + +++     G ++YS+ L+G    L
Sbjct: 380 SGMYDYEGVALFGDKLIAKRHSMSMGDEIYSVALDGSTTQL 420


>gi|159897952|ref|YP_001544199.1| peptidase S9 prolyl oligopeptidase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159890991|gb|ABX04071.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 682

 Score = 38.1 bits (87), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 47/241 (19%), Positives = 93/241 (38%), Gaps = 47/241 (19%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD------ 243
           ++++ ++  DG   + +T S       PR+SP+  K+A+ +  D  + +++++D      
Sbjct: 52  RSAIMLIQADGGIPQRMTFSVSGRDSSPRWSPDGSKLAFISTRDAGVAQLFVLDLARGGE 111

Query: 244 ----TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------------- 277
               T +      I N+R    A  F S G +A                           
Sbjct: 112 AQQLTSLGYGVAEI-NWRPDSQALAFISRGAKAKAQTHVESLRDEKIIERLPFKFDGVGY 170

Query: 278 -KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF------ESDREGKEQLYV 330
            + E   I+ V+L     + +T+  F +   ++SPD S++ F      E +   +  +Y+
Sbjct: 171 LQPEYAQIWLVELGQEPNQ-ITDQAFDHADPAWSPDGSELAFITVSRAELEHTRQADMYL 229

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----SGEKFAIGVMKKDGSQERL 385
           +    +   R   +     + P WSP G  IA+        +    A+  + + G   RL
Sbjct: 230 LNV-AAGTSRCLTNALGPVYHPTWSPDGSQIAYIGHDQHTGNASNEALWCVSRAGGDARL 288

Query: 386 L 386
           L
Sbjct: 289 L 289


>gi|298241399|ref|ZP_06965206.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297554453|gb|EFH88317.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 487

 Score = 38.1 bits (87), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 16/144 (11%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD  +I   S  +G   ++  +  GS Q       EASY    WSP G  IA    S
Sbjct: 253 AWSPDGKRIA-SSSEDGMLLVWDPEGKGSTQVYKGHQGEASYL--AWSPDGKRIASVSMS 309

Query: 368 GEKFAIGVMK-KDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKD------GDTG 415
              +   +++ ++ +  RLL       D ++    WSP G+ +  S   D        TG
Sbjct: 310 RRPYDDDIVQVREVANLRLLYAYQLASDYHVTGVAWSPDGKRIAISADPDLIQVWNAATG 369

Query: 416 SKLYSIDLNGRNETLINTPAYASD 439
             ++S      N     TP ++ D
Sbjct: 370 HPIFSY-YGASNGDRFTTPDWSPD 392


>gi|227113077|ref|ZP_03826733.1| hypothetical protein PcarbP_08950 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 370

 Score = 38.1 bits (87), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 11/109 (10%)

Query: 310 SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKF 366
           SPD S+I F   D  G  QL+ +  NG + +++++ +    S F+  W P G  +AF   
Sbjct: 257 SPDGSEIAFLMRDEAGVVQLWTLSPNGGEPRQVTRTEHGVQSAFN--WHPDGRSLAFVS- 313

Query: 367 SGEKFAIGVMKKDGSQERLLVE-DS--NLQAPTWSPSGRSLIFSRKKDG 412
             +   +    K G   RL    DS  +  A  +SP G+ + + R+ DG
Sbjct: 314 --DNSIMLCEAKSGELVRLTARTDSAPSADAVVFSPDGKHIAYMREIDG 360


>gi|297183211|gb|ADI19351.1| dipeptidyl aminopeptidases/acylaminoacyl-peptidases [uncultured
           Chloroflexi bacterium HF0500_03M05]
          Length = 647

 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 60/132 (45%), Gaps = 17/132 (12%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKR 340
           +I+ V        +LT     ++   +SPD   +VF SDR  +G+ QLY++   G +  +
Sbjct: 48  NIWVVPTDGGDATQLTFGPRSDLCPRWSPDGQSLVFLSDRTEDGQRQLYLLPMYGGEAAQ 107

Query: 341 ISQDKEA-----SYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQE--------RL 385
           ++  + +     S     WSP G  IAF K     E+  +  M+KD + E        R+
Sbjct: 108 LTTVEGSIPASRSVDTVAWSPDGRKIAFMKTDAETEQEKLRQMEKDDAIEFERNPKYTRI 167

Query: 386 LVEDSNLQAPTW 397
            V D + Q  +W
Sbjct: 168 NVVDVDTQILSW 179


>gi|261213062|ref|ZP_05927346.1| protease-related protein [Vibrio sp. RC341]
 gi|260838127|gb|EEX64804.1| protease-related protein [Vibrio sp. RC341]
          Length = 1085

 Score = 38.1 bits (87), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 11/79 (13%)

Query: 342 SQDKEASYFDPVW------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QA 394
           +Q  E SY  P W      SP G  IAFT ++G+   I ++   G +   L E     + 
Sbjct: 29  NQQLEPSYSHPTWLRDIALSPNGQQIAFT-YAGQ---IWLVPAQGGEAIALTESGVYSEM 84

Query: 395 PTWSPSGRSLIFSRKKDGD 413
           P WSP  +SL FS  + G+
Sbjct: 85  PVWSPDSQSLAFSANRYGE 103


>gi|160885691|ref|ZP_02066694.1| hypothetical protein BACOVA_03695 [Bacteroides ovatus ATCC 8483]
 gi|156108504|gb|EDO10249.1| hypothetical protein BACOVA_03695 [Bacteroides ovatus ATCC 8483]
          Length = 700

 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 22/161 (13%)

Query: 283 DIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKE----QLYVMQSNGS 336
           DIY  DL +  TE +T      + +  YSPD   I ++S +R+G E    +L++M     
Sbjct: 269 DIYVYDLNTKKTENITEENKGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETG 328

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +++ +S+  E++    VW     +I FT         GV   +     L + + +++A T
Sbjct: 329 EKRFVSKAFESNVDAFVWGADAKVIYFT---------GVWHGESQIYALDLANDSVKAIT 379

Query: 397 ---WSPSGRSL----IFSRKKDGDTGSKLYSIDLNGRNETL 430
              +   G +L    + +++     G ++YS+ L+G    L
Sbjct: 380 SGMYDYEGVALFGDKLIAKRHSMSMGDEIYSVALDGSTTQL 420


>gi|332662646|ref|YP_004445434.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
 gi|332331460|gb|AEE48561.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
          Length = 1048

 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 8/162 (4%)

Query: 206 LTPSRDQILF--EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            T  ++ + F   P  SP+   + +A   D  I +V        R     G+ R     P
Sbjct: 20  FTQDKNAVYFTDHPALSPDGNTLYFAYAGD--IWKVSAAGGLATRLTAMEGDER----FP 73

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R S +GK    S Q+    D+Y + L+     +LT     ++  S+S DS  I F S R 
Sbjct: 74  RPSPDGKWLAFSAQQFGNTDVYLLPLEGGEIRQLTYHDANDLVCSWSWDSGFIYFTSGRY 133

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            +   Y +   G    R+  +   +  D    P+G  I F +
Sbjct: 134 NRVSGYKVSVEGGTPMRMFPNYHHTVHDIAEHPRGGEIFFNE 175


>gi|157374478|ref|YP_001473078.1| peptidase S41 [Shewanella sediminis HAW-EB3]
 gi|157316852|gb|ABV35950.1| peptidase S41 [Shewanella sediminis HAW-EB3]
          Length = 1094

 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 77/150 (51%), Gaps = 17/150 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD   +   SD  G+++++   ++GS   K++++D +        SP G  IA   + G
Sbjct: 363 SPDGQWVYGISDASGEQEIWQFPADGSQGAKQLTKDGKTLRMSLSVSPDGRYIASDDYDG 422

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSK--LYSID 422
             + +  +KK+ S+ +++ +   L  P     WS   R +  ++ + G    +  LYS++
Sbjct: 423 NLWLLD-LKKNRSK-KIITQGEGL-GPYADVVWSGDSRFIAITKSELGKPRPQIVLYSLE 479

Query: 423 LNGRNETLIN------TPAYASDPQWVGFM 446
            N R+ET+ +      +PA++SD +W+ F+
Sbjct: 480 EN-RSETVTSDKYESYSPAFSSDGKWLYFL 508


>gi|115378689|ref|ZP_01465838.1| peptidase S9, prolyl oligopeptidase active site region [Stigmatella
           aurantiaca DW4/3-1]
 gi|115364310|gb|EAU63396.1| peptidase S9, prolyl oligopeptidase active site region [Stigmatella
           aurantiaca DW4/3-1]
          Length = 600

 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 13/152 (8%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            AS+SPD  +I+F S+  G    Y +   G     ++Q K  S F   + P+ + I +T+
Sbjct: 8   GASFSPDEKKILFSSNGSGIFNAYSVPVKGGTPTPLTQSKTDSTFAVSYFPKDERILYTR 67

Query: 366 FSG--EKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDT------- 414
             G  E   + V   DG +E+ L    NL+A    W     S  +    + D        
Sbjct: 68  DQGGNENSHLYVRGLDG-KEKDLTPGDNLKALFAGWKEDDGSAFYVLSNERDARFFDLYK 126

Query: 415 -GSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
            G+K Y   L  +NE        + D +W+  
Sbjct: 127 YGAKTYERTLLYQNEGNYMVAGISRDEKWIAL 158


>gi|91773689|ref|YP_566381.1| hypothetical protein Mbur_1741 [Methanococcoides burtonii DSM 6242]
 gi|91712704|gb|ABE52631.1| Hypothetical protein Mbur_1741 [Methanococcoides burtonii DSM 6242]
          Length = 559

 Score = 37.7 bits (86), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 14/132 (10%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD  +IVF    +    + ++     +  +I   +    +D  WSP  + + F + SG
Sbjct: 282 WSPDGEKIVF---IQNICNIIIVDIEKRELNQIYSAEHVGMYDAQWSPDSNKLIFYEISG 338

Query: 369 EKFAIGVMKKD--------GSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +   G +  D        G+ E++ V DS + +   W P    L+  ++ D DT + LY
Sbjct: 339 SE-EDGTLNYDIYAINDSGGNPEKIAVFDSGSSRVIQWYPDSEKLLVKKRSDDDTYA-LY 396

Query: 420 SIDLNGRNETLI 431
           S+ + G+   LI
Sbjct: 397 SLSIIGKMGKLI 408


>gi|237719462|ref|ZP_04549943.1| prolyl oligopeptidase [Bacteroides sp. 2_2_4]
 gi|229451322|gb|EEO57113.1| prolyl oligopeptidase [Bacteroides sp. 2_2_4]
          Length = 700

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 22/161 (13%)

Query: 283 DIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKE----QLYVMQSNGS 336
           DIY  DL +  TE +T      + +  YSPD   I ++S +R+G E    +L++M     
Sbjct: 269 DIYVYDLNTKKTENITEENKGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETG 328

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +++ +S+  E++    VW     +I FT         GV   +     L + + +++A T
Sbjct: 329 EKRFVSKAFESNVDAFVWGADAKVIYFT---------GVWHGESQIYALDLANDSVKAIT 379

Query: 397 ---WSPSGRSL----IFSRKKDGDTGSKLYSIDLNGRNETL 430
              +   G +L    + +++     G ++YS+ L+G    L
Sbjct: 380 SGMYDYEGVALFGDKLIAKRHSMSMGDEIYSVALDGSTTQL 420


>gi|153938451|ref|YP_001391233.1| putative lipoprotein [Clostridium botulinum F str. Langeland]
 gi|152934347|gb|ABS39845.1| putative lipoprotein [Clostridium botulinum F str. Langeland]
 gi|295319269|gb|ADF99646.1| putative lipoprotein [Clostridium botulinum F str. 230613]
          Length = 357

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 72/157 (45%), Gaps = 20/157 (12%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQLYVM 331
           S+Q  E M IY  DL++    ++ + + ++ S     +  +I++    S++E K ++Y  
Sbjct: 139 SLQSAEGMKIY--DLENKKEIKIKSDVLVSGSLFKWLNEDEILYYGINSEKENKAKIY-- 194

Query: 332 QSNGSDQKRISQDKEASYFDPV------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                 +  + ++KE  Y D +      + P GD +      G+KF++    K  +  + 
Sbjct: 195 ------KYNVKENKEEVYVDNIEGICTYFMPNGDNVLLLSRQGDKFSLSYYNKKDNSFKK 248

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           + E+ N Q    + S +++ F  K D +    LY ID
Sbjct: 249 ISEEVN-QVYKGTKSTKNMYFLGKNDLENKDYLYKID 284


>gi|310820170|ref|YP_003952528.1| peptidase, s9 prolyl oligopeptidase [Stigmatella aurantiaca
           DW4/3-1]
 gi|309393242|gb|ADO70701.1| Peptidase, S9 prolyl oligopeptidase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 645

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 62/152 (40%), Gaps = 13/152 (8%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            AS+SPD  +I+F S+  G    Y +   G     ++Q K  S F   + P+ + I +T+
Sbjct: 53  GASFSPDEKKILFSSNGSGIFNAYSVPVKGGTPTPLTQSKTDSTFAVSYFPKDERILYTR 112

Query: 366 FSG--EKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDT------- 414
             G  E   + V   DG +E+ L    NL+A    W     S  +    + D        
Sbjct: 113 DQGGNENSHLYVRGLDG-KEKDLTPGDNLKALFAGWKEDDGSAFYVLSNERDARFFDLYK 171

Query: 415 -GSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
            G+K Y   L  +NE        + D +W+  
Sbjct: 172 YGAKTYERTLLYQNEGNYMVAGISRDEKWIAL 203


>gi|223995029|ref|XP_002287198.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976314|gb|EED94641.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1043

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 25/217 (11%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFS 266
           P    I    ++ P  Q +A +      +  V + +T   R PK +    +S +LA  FS
Sbjct: 686 PLEGGIPLCAKWHPKDQYLAISG----QLKNVVVYETSCRRLPKGMCLRSKSTVLAVEFS 741

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-----INISASYS-------PDSS 314
            NGK  +I+V  +  +  +  D  S A   L  T+      I I  S S         S+
Sbjct: 742 PNGK--IIAVGNETGLVTF-FDATSTAFVTLFETVIGVGKDITIQWSSSGRNVAIASGST 798

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            ++F++   GK  ++   S+    +++ Q    ++    +SP+GD IA T    ++  I 
Sbjct: 799 FVLFDTIFCGKVGVHPASSSRFLVRKVIQGG-VNFTSLAFSPKGDYIALTD---DQTRIL 854

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            +K D S  R+L +  N+ +  WSP G +     K+D
Sbjct: 855 NIKDDCSCVRVL-DQQNVLSSGWSPDGAAFALVGKRD 890


>gi|298482873|ref|ZP_07001056.1| prolyl oligopeptidase family protein [Bacteroides sp. D22]
 gi|298271073|gb|EFI12651.1| prolyl oligopeptidase family protein [Bacteroides sp. D22]
          Length = 700

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 22/161 (13%)

Query: 283 DIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKE----QLYVMQSNGS 336
           DIY  DL +  TE +T      + +  YSPD   I ++S +R+G E    +L++M     
Sbjct: 269 DIYIYDLNTKKTENITEENKGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETG 328

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +++ +S+  E++    VW     +I FT         GV   +     L + + +++A T
Sbjct: 329 EKRFVSKTFESNVDAFVWGADAKVIYFT---------GVWHGESQIYALDLANDSVKAIT 379

Query: 397 ---WSPSGRSL----IFSRKKDGDTGSKLYSIDLNGRNETL 430
              +   G +L    + +++     G ++YS+ L+G    L
Sbjct: 380 SGMYDYEGVALFGDKLIAKRHSMSMGDEIYSVALDGSTTQL 420


>gi|293370213|ref|ZP_06616773.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           ovatus SD CMC 3f]
 gi|292634710|gb|EFF53239.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           ovatus SD CMC 3f]
          Length = 693

 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 22/161 (13%)

Query: 283 DIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKE----QLYVMQSNGS 336
           DIY  DL +  TE +T      + +  YSPD   I ++S +R+G E    +L++M     
Sbjct: 262 DIYVYDLNTKKTENITEENKGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETG 321

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +++ +S+  E++    VW     +I FT         GV   +     L + + +++A T
Sbjct: 322 EKRFVSKAFESNVDAFVWGADAKVIYFT---------GVWHGESQIYALDLANDSVKAIT 372

Query: 397 ---WSPSGRSL----IFSRKKDGDTGSKLYSIDLNGRNETL 430
              +   G +L    + +++     G ++YS+ L+G    L
Sbjct: 373 SGMYDYEGVALFGDKLIAKRHSMSMGDEIYSVALDGSTTQL 413


>gi|262198502|ref|YP_003269711.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262081849|gb|ACY17818.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1684

 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 49/227 (21%), Positives = 102/227 (44%), Gaps = 14/227 (6%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            SV++  + +S  V + +GA    +       +    FSP+ ++VA A+ D     RV+ +
Sbjct: 1064 SVLTASVDHSARVWNANGAGEPLVLEGHTDEVVSAVFSPDGERVATASADGR--ARVWSV 1121

Query: 243  DTRIDRAPKRIG--NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
               +    K +        + A  FS +G+R +++   D    ++S D    A     ++
Sbjct: 1122 RAVVAGRAKSVTLRGHTGPVRAVAFSPDGER-VVTASADGTARVWSADGTGAAVVLRGHS 1180

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              I  + S+SPD  ++V  S  +G  +++   ++GS +  + +  +    D  +SP G+ 
Sbjct: 1181 DQIR-AVSFSPDGERVVTAS-ADGTARVW--SADGSGEPVVLRGHQGWVVDVCFSPDGER 1236

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
            +A   F     +  V   DGS E +++     ++ +  +SP G  ++
Sbjct: 1237 VATASFDN---SARVWLADGSGEPVVLAGHTQSVASVRFSPEGERVV 1280


>gi|299146181|ref|ZP_07039249.1| prolyl oligopeptidase family protein [Bacteroides sp. 3_1_23]
 gi|298516672|gb|EFI40553.1| prolyl oligopeptidase family protein [Bacteroides sp. 3_1_23]
          Length = 700

 Score = 37.7 bits (86), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 74/161 (45%), Gaps = 22/161 (13%)

Query: 283 DIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKE----QLYVMQSNGS 336
           DIY  DL +  TE +T      + +  YSPD   I ++S +R+G E    +L++M     
Sbjct: 269 DIYIYDLNTKKTENITEENKGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETG 328

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +++ +S+  E++    VW     +I FT         GV   +     L + + +++A T
Sbjct: 329 EKRFVSKTFESNVDAFVWGADAKVIYFT---------GVWHGESQIYALDLANDSVKAIT 379

Query: 397 ---WSPSGRSL----IFSRKKDGDTGSKLYSIDLNGRNETL 430
              +   G +L    + +++     G ++YS+ L+G    L
Sbjct: 380 SGMYDYEGVALFGDKLIAKRHSMSMGDEIYSVALDGSTTQL 420


>gi|302816734|ref|XP_002990045.1| hypothetical protein SELMODRAFT_160579 [Selaginella moellendorffii]
 gi|300142165|gb|EFJ08868.1| hypothetical protein SELMODRAFT_160579 [Selaginella moellendorffii]
          Length = 603

 Score = 37.7 bits (86), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 23/97 (23%), Positives = 46/97 (47%), Gaps = 1/97 (1%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           F   + + SPD+   V   D++GK  L+ +  +G  Q+ + +   AS     +SP G + 
Sbjct: 445 FTATAVAVSPDAKAAVV-GDKDGKLHLFSLGEDGLHQEALLERHRASVTALEFSPDGTMF 503

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           A    + E F    +K++   + +L   +++Q   W+
Sbjct: 504 ASGDQNREAFVWDAVKREVKLKNMLYHTTSIQCIAWA 540


>gi|312130675|ref|YP_003998015.1| peptidase s9 prolyl oligopeptidase active site domain protein
           [Leadbetterella byssophila DSM 17132]
 gi|311907221|gb|ADQ17662.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Leadbetterella byssophila DSM 17132]
          Length = 709

 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 16/154 (10%)

Query: 284 IYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFES--------DREGKEQLYVMQSN 334
           ++ ++++ NA  R   + F + + A+Y+PD   I   +        DRE + ++  +Q +
Sbjct: 234 LFEIEVKENAQARALTSGFASYNGANYAPDGRSIFVSTAKDADEHPDRESENKIVQIQLS 293

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----AIGVMKKDGSQERLLVEDS 390
              QK I    E ++     SP G   A T  SG        + ++  DGSQ + +  D 
Sbjct: 294 DLSQKVILSKNETAFRGFSLSPSGKKAA-TVISGTNGLSYGKLAIVNSDGSQLKEIDFDR 352

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 W+P  + L F+ + +G  GS ++ ++L+
Sbjct: 353 VPSGFNWTPDEKFLYFTAQSNG--GSPIFRLELS 384


>gi|163840760|ref|YP_001625165.1| acylamino-acid-releasing enzyme [Renibacterium salmoninarum ATCC
           33209]
 gi|162954236|gb|ABY23751.1| acylamino-acid-releasing enzyme [Renibacterium salmoninarum ATCC
           33209]
          Length = 677

 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 10/130 (7%)

Query: 260 ILAPRFSSNGKRALISVQK-DEAMDIYSVDL------QSNATERLTNTLFINISASYSPD 312
           + AP     G  A+++V + D   D Y   L       S++  R T   F + +  YSPD
Sbjct: 19  VSAPTLHPEGVTAIVAVSRADFDADSYVGQLWQFSTDDSSSPRRFTRG-FRDSAPQYSPD 77

Query: 313 SSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            + + F     GK  Q++++ + G + + I+ D++ S  +  WSP G+ I F     E+ 
Sbjct: 78  GAVLAFMRSAPGKAGQIHIVDARGGEPQTIT-DRKLSVNEFSWSPGGNQIVFAAAVPEEG 136

Query: 372 AIGVMKKDGS 381
             G +   G+
Sbjct: 137 RYGTIDGVGA 146


>gi|332829074|gb|EGK01738.1| hypothetical protein HMPREF9455_01886 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 693

 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 12/143 (8%)

Query: 310 SPDSSQIVF-------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           SPD S++++       E ++  +E L+ M  +GSD+K+I+Q  ++   + VW   G  IA
Sbjct: 59  SPDKSKVLYGVTYVSIEQNKTNRE-LFTMNIDGSDKKQITQTAKSEN-NAVWIKGGSKIA 116

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYS 420
           F         I  M  DG++   + E +  +   ++SP  + +++ +  K G+  +  Y 
Sbjct: 117 FLSSESGSSQIWEMNPDGTERMQISEIEGGVNGFSYSPDEKKILYIKNIKFGERTADKYP 176

Query: 421 IDLNGRNETLINTPAYASDPQWV 443
            DL   +  +I+   Y    +WV
Sbjct: 177 -DLPKASGRIIDDLMYKHWSEWV 198


>gi|18312539|ref|NP_559206.1| tricorn protease [Pyrobaculum aerophilum str. IM2]
 gi|18160005|gb|AAL63388.1| tricorn protease [Pyrobaculum aerophilum str. IM2]
          Length = 1016

 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 16/123 (13%)

Query: 276 VQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVF----ESDREGKEQL 328
           +  DE + +   DL   A    +RLT+   + +   +SPD   I F    ++D+     +
Sbjct: 10  IYGDEIIFVTEDDLWKYAKGIGQRLTSDFGVVLKPKFSPDGKWIAFTRLQQTDQGTTADV 69

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQ 382
           YV+ S G + KRI+           W+P G ++ ++ F        E +AI +   DG  
Sbjct: 70  YVVPSEGGEPKRITYFGTPFTRVVGWTPDGRVLVYSDFKTPFPQWRELYAISL---DGIY 126

Query: 383 ERL 385
           ERL
Sbjct: 127 ERL 129


>gi|237751471|ref|ZP_04581951.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229372837|gb|EEO23228.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 428

 Score = 37.7 bits (86), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 66/368 (17%), Positives = 153/368 (41%), Gaps = 21/368 (5%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           + +++ +DL+    FN+   D+ K  I   +     QD+ +     +      K+G   L
Sbjct: 57  IYKMLVQDLKTLGHFNVYYDDTLKTDILQNN--LALQDYKNKNMNFIAQVSQKKKGGS-L 113

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
                L++    K I  +        +  IAH ++  +   I     D+ +R +  S  V
Sbjct: 114 IATLSLYEYASGKTITTEYREDEIERYPFIAHAMASYLNDYIKAPNADWLNRYVVFSNYV 173

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            SG  ++++ + D      + +  +   +   P+++ ++Q+  Y T    +   +Y  + 
Sbjct: 174 GSG--RSNILIADYTFTYQKTIISNGLNMF--PKWADSKQEEFYYTLVTHEA-TIYKYNM 228

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  K I + + M +    S +G + L+S+      DI+  +++S    +LT    I+
Sbjct: 229 YSGKNEKVISS-QGMAVVSDVSKHGDKLLLSLAPVGLSDIFLYEIKSKKLTQLTRYSGID 287

Query: 305 ISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           ++A ++ +    VF SDR G   +++  +  N +  + + + +  S      S  G  I 
Sbjct: 288 VNAHFTNNEKSFVFVSDRLGYPNIFMQDLMPNANVTQIVFKGRNNS----TLSTFGQYIV 343

Query: 363 FTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           ++    ++      F + ++       R L +    + P +S  G S++F R++  +   
Sbjct: 344 YSSRESDEETGLNVFNLYLVSAHSDYVRRLSKIGTNRIPAFSHDGDSIMFLRQQKNEQAI 403

Query: 417 KLYSIDLN 424
            +  + +N
Sbjct: 404 GIIRLSIN 411


>gi|261819407|ref|YP_003257513.1| hypothetical protein Pecwa_0037 [Pectobacterium wasabiae WPP163]
 gi|261603420|gb|ACX85906.1| conserved hypothetical protein [Pectobacterium wasabiae WPP163]
          Length = 428

 Score = 37.7 bits (86), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 11/109 (10%)

Query: 310 SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKF 366
           SPD  +I F   D  G  QL+ +  NG + ++++  +    S F+  W P G  +AF   
Sbjct: 313 SPDGGEIAFLMRDEAGVAQLWAISPNGGEPRQVTHTEHGVQSAFN--WHPDGRSLAFVC- 369

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDG 412
             +   +    K G   R+     N     A  +SP G+ + + R+ DG
Sbjct: 370 --DNSIMLCDAKSGELVRMTARTDNAPSADAVVFSPDGKHIAYMREIDG 416


>gi|237714507|ref|ZP_04544988.1| prolyl oligopeptidase [Bacteroides sp. D1]
 gi|262406372|ref|ZP_06082921.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294643252|ref|ZP_06721078.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294806445|ref|ZP_06765286.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|229445276|gb|EEO51067.1| prolyl oligopeptidase [Bacteroides sp. D1]
 gi|262355075|gb|EEZ04166.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292641375|gb|EFF59567.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294446308|gb|EFG14934.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 700

 Score = 37.7 bits (86), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 22/161 (13%)

Query: 283 DIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKE----QLYVMQSNGS 336
           DIY  DL +  TE +T      + +  YSPD   I ++S +R+G E    +L++M     
Sbjct: 269 DIYVYDLNTQKTENITEENKGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETG 328

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +++ +S+  E++    VW     +I FT         GV   +     L + + +++A T
Sbjct: 329 EKRFVSKAFESNVDAFVWGADAKMIYFT---------GVWHGESQIYALDLANDSVKAIT 379

Query: 397 ---WSPSGRSL----IFSRKKDGDTGSKLYSIDLNGRNETL 430
              +   G +L    + +++     G ++Y++ L+G    L
Sbjct: 380 SGMYDYEGVALFGDKLIAKRHSMSMGDEIYTVALDGSTTQL 420


>gi|322437538|ref|YP_004219628.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX9]
 gi|321165431|gb|ADW71134.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX9]
          Length = 501

 Score = 37.7 bits (86), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 70/188 (37%), Gaps = 18/188 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESD- 321
            +++G R L SV  D    + ++ + +    +L     L  N     S D S+++  S  
Sbjct: 238 LATDGDRILTSVSVDGRPRLSAIYISTGEVHKLATPKELSSNSLEDISKDGSKLLLRSQL 297

Query: 322 -REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             E ++ L+V  S G    RI         D  W P G  I +   +     +  ++ DG
Sbjct: 298 SSESEQPLWVTPSAGGSGLRIGNVLAQ---DATWMPDGVSILYANGND----LYTVQADG 350

Query: 381 SQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
              +L    + LQ       WSP GR L F+        + LY ++   R    +  P  
Sbjct: 351 GSSKLY---ATLQGRAFWMRWSPDGRLLRFTLVDPVTHSTNLYELEAGSRTARPVRLPGL 407

Query: 437 ASDPQWVG 444
              P   G
Sbjct: 408 TPQPACCG 415


>gi|253686441|ref|YP_003015631.1| hypothetical protein PC1_0032 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753019|gb|ACT11095.1| conserved hypothetical protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 434

 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 11/109 (10%)

Query: 310 SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKF 366
           SPD S+I F   D  G  QL+ +  NG + ++++  +    S F+  W P G  +AF   
Sbjct: 321 SPDGSEIAFLMRDEAGVVQLWTISPNGGEPRQVTHTEHGVQSAFN--WHPDGRSLAFVC- 377

Query: 367 SGEKFAIGVMKKDGSQERLLVE-DS--NLQAPTWSPSGRSLIFSRKKDG 412
             +   +    K G   RL    DS  +  A  +SP G+ + + R+ DG
Sbjct: 378 --DNSIMLCEAKSGELVRLTARTDSAPSADAVVFSPDGKHIAYMREIDG 424


>gi|326798425|ref|YP_004316244.1| peptidase S41 [Sphingobacterium sp. 21]
 gi|326549189|gb|ADZ77574.1| peptidase S41 [Sphingobacterium sp. 21]
          Length = 1074

 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F S   G +   V  S G  +  I+   + S   P++SP G  +AF      
Sbjct: 55  SPDGQEIAFVS---GGDIWTVSASGGEARLLIAHPAQDS--RPLYSPDGSQLAFVSTRTG 109

Query: 370 KFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS--KLYSIDLNGR 426
              I V+   DG   RL  ++   +   WS  G+ L+F     GD  S   ++ I ++G 
Sbjct: 110 NGDIYVLSLSDGKLRRLTYDEGPEELSGWSADGKYLLF-HSNTGDIASMYDIWKIPIDGG 168

Query: 427 NETLINTPAYASD 439
               ++   YA++
Sbjct: 169 TPMPVSADRYATE 181


>gi|189466155|ref|ZP_03014940.1| hypothetical protein BACINT_02525 [Bacteroides intestinalis DSM
           17393]
 gi|189434419|gb|EDV03404.1| hypothetical protein BACINT_02525 [Bacteroides intestinalis DSM
           17393]
          Length = 702

 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 16/108 (14%)

Query: 310 SPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGD 359
           SPD  QI +        + +   +++VM ++G+  ++I+    Q+ E +     W   G 
Sbjct: 61  SPDEKQIAYTVAYYSVPENKSNREVFVMNTDGTGNQQITRTPWQENEVN-----WIKGGT 115

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
            +AF    G    +  M  DGS  + L + D +++  ++SP G+ L+F
Sbjct: 116 KLAFLSNEGGSSQLWEMNPDGSGRKQLTQYDGDIEGYSFSPDGKKLLF 163


>gi|119472121|ref|ZP_01614352.1| Dipeptidyl peptidase IV [Alteromonadales bacterium TW-7]
 gi|119445141|gb|EAW26434.1| Dipeptidyl peptidase IV [Alteromonadales bacterium TW-7]
          Length = 741

 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 10/97 (10%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R  +RI  F   IL   +S++GK  L  +  D    +Y  DL S  +++LTNT      A
Sbjct: 103 RERQRI--FGKGILEYTWSTDGKALLFPLNGD----LYYYDLASAKSKKLTNTDAFETDA 156

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
            +SP  + + F  +    + LY +  N   + ++SQD
Sbjct: 157 RFSPKGNYVSFIRE----QNLYALALNSGKEIQLSQD 189


>gi|222479016|ref|YP_002565253.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halorubrum lacusprofundi ATCC 49239]
 gi|222451918|gb|ACM56183.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halorubrum lacusprofundi ATCC 49239]
          Length = 628

 Score = 37.7 bits (86), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 19/173 (10%)

Query: 284 IYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFESDREGKE--QLYVMQSNGSDQ 338
           ++S+D      E+ T   F   S S+   SP+ ++ VF  D  G E  QLY++     + 
Sbjct: 38  VWSLDEPLGWPEQHT---FFEESVSFVDSSPERAEAVFGMDEGGNERAQLYLLNYESGEI 94

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKD---GSQERLLVEDSNLQ 393
             ++   EA +    W  +GD  AF   +     F I V  +D   G  E +   D  L 
Sbjct: 95  TDLTDRPEAKHRWGGWDSEGDRFAFASNRRDTSVFDIYVQDRDAIGGDAELVYEGDGWLS 154

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP----AYASDPQW 442
              WSPS   LI   +        +Y++DL    +   +TP    A    P+W
Sbjct: 155 VAGWSPSDDRLIV-HEAHSSFDHDVYTLDL-ATGDLTHHTPHQRDARYGSPEW 205


>gi|9107416|gb|AAF85059.1|AE004038_8 alanyl dipeptidyl peptidase [Xylella fastidiosa 9a5c]
          Length = 709

 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 86/220 (39%), Gaps = 38/220 (17%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SA 307
           AP R+      + AP FS +GK       K  +  +Y + +    + +LTN L ++I S 
Sbjct: 98  APVRLTPLGWDVSAPVFSRDGKAVYFLSAKSGSHQLYVLPVSGGTSRQLTN-LAVDIDSY 156

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSD----QKRISQDKEA--------SYFDPVWS 355
             SP   +IVF +         V Q  GSD    ++++ + K A          F   W 
Sbjct: 157 KLSPQGDRIVFSAG--------VFQVCGSDLSCTKRKLDEKKNAKASGVVFEQLFVRHWD 208

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFS 407
              D    T F     A+G            + D ++ +          WSP G S++ S
Sbjct: 209 TWNDGRRNTLFIASLPAVGAKPVSVVSAMSAMLDGDVPSKPFGGADHFVWSPDGHSVVAS 268

Query: 408 -----RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                R++   T   LY  D++G +  +  T   A++P W
Sbjct: 269 IRVAGRQEPWSTNFDLYRFDVSGHDAPVNLT---AANPAW 305


>gi|209522641|ref|ZP_03271199.1| WD-40 repeat protein [Arthrospira maxima CS-328]
 gi|209496690|gb|EDZ96987.1| WD-40 repeat protein [Arthrospira maxima CS-328]
          Length = 1178

 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 112/247 (45%), Gaps = 39/247 (15%)

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFS 266
             DQ +     SP+ + +A +++D+   +R++ M+  +    K I N  SM    LA  FS
Sbjct: 906  HDQGVIGLAVSPDGEILATSSWDES--IRLWNMEGEL---LKVINNAHSMGGNQLA--FS 958

Query: 267  SNGKRALISVQKDEAMDIYS----VDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             NG+  + SV  D  + ++S       +   +E +T   F       SPD   +V  S+ 
Sbjct: 959  PNGE-VIASVGNDNKVKLWSRVGEFLREWEYSESITGIAF-------SPDGKMVVTGSED 1010

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                 +Y+   +GS  + I  + + S +   +SPQGD+IA          + +   DG +
Sbjct: 1011 TEVRVVYI---DGSGTRLIG-NHQGSVWGVAFSPQGDMIASASTDN---TLRLWFLDGRE 1063

Query: 383  ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG------DTGSKLYSIDLNGRNETLINTPAY 436
              +L     +    +SP G+ +I S   DG      + G K+ ++    R++  + T A+
Sbjct: 1064 PIVLHHQGTVDKVAFSPDGQ-MIASASWDGTIQLWTNEGVKIRTLI---RHQGSVRTVAF 1119

Query: 437  ASDPQWV 443
            ++D +W+
Sbjct: 1120 SNDGKWM 1126


>gi|163848036|ref|YP_001636080.1| WD40 domain-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222525923|ref|YP_002570394.1| WD40 domain-containing protein [Chloroflexus sp. Y-400-fl]
 gi|163669325|gb|ABY35691.1| WD40 domain protein beta Propeller [Chloroflexus aurantiacus
           J-10-fl]
 gi|222449802|gb|ACM54068.1| WD40 domain protein beta Propeller [Chloroflexus sp. Y-400-fl]
          Length = 329

 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 3/112 (2%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G++QL+ + +N   Q           +DP  SP G  + F         +  M  +G  
Sbjct: 201 DGQQQLFRISNN---QATPLPGAPTPAYDPALSPDGTWLVFAVGINGGSDLYAMPANGGS 257

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              L +  + ++P ++P G++L F     G  G  LY  ++    +TL  +P
Sbjct: 258 PIRLTDIGSARSPAFAPDGKTLAFLAIPPGGRGFDLYLAEVAIAGDTLQLSP 309


>gi|114775410|ref|ZP_01450978.1| translocation protein TolB precursor [Mariprofundus ferrooxydans
           PV-1]
 gi|114553521|gb|EAU55902.1| translocation protein TolB precursor [Mariprofundus ferrooxydans
           PV-1]
          Length = 363

 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 5/80 (6%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +Y +D +S     + N        + SPD  +++F  + +G   L++ + NG +  +++ 
Sbjct: 215 LYILDRKSGDLTMIPNAF----DGTISPDGRKVIFVRETKGNYDLWMQEINGGELVQLT- 269

Query: 344 DKEASYFDPVWSPQGDLIAF 363
           D     F+P WSP G  + F
Sbjct: 270 DSPFGDFEPAWSPDGSRVLF 289


>gi|206889573|ref|YP_002249100.1| hypothetical protein THEYE_A1286 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206741511|gb|ACI20568.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 417

 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 42/175 (24%), Positives = 78/175 (44%), Gaps = 33/175 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           L+  R S +++K+A     D     + +     +R       F   +L P+FS +GK+  
Sbjct: 267 LWNQRVSTDKKKIAAVVATDFGKWTIAVDGIPWNRT------FSQAVLPPQFSPDGKKVA 320

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             V+++     ++V +     +R    ++   S  +SPDSS I+ ++++EG   +Y +  
Sbjct: 321 AVVRENNQ---WTVAVDGIPWKRGFERVW---SPQFSPDSSHIITKAEKEG---VYFIVL 371

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLL 386
           +G     I +D     FD +W PQ        FS  GEK  +  +K      ++L
Sbjct: 372 DG----EIGKDT----FDILWEPQ--------FSPDGEKILVRCIKNGRYYRKIL 410


>gi|116620550|ref|YP_822706.1| WD40 domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223712|gb|ABJ82421.1| WD40 domain protein beta Propeller [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 851

 Score = 37.4 bits (85), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 60/128 (46%), Gaps = 6/128 (4%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +SP+  K+AY      DI  +Y         P+ +           ++ +GK  +  +
Sbjct: 628 PVWSPDGAKLAYFARQG-DIYDIYSRSALPGSRPELLLKSDVNKYPTDWTHDGKYLIYGL 686

Query: 277 Q-KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ--- 332
             +   +D++ + +    +  + +T+F    AS SPD   + ++SD+ G+ ++YV Q   
Sbjct: 687 TGRGTHLDVWGLAVGDRRSAPILDTVFSEGFASVSPDGKWLAYQSDQSGRTEVYVQQFDG 746

Query: 333 -SNGSDQK 339
            SNG+ ++
Sbjct: 747 LSNGTKRR 754


>gi|116621582|ref|YP_823738.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224744|gb|ABJ83453.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 898

 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 60/282 (21%), Positives = 113/282 (40%), Gaps = 34/282 (12%)

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F + S       +T PD++ R +D++    QVL  GR +   +            K 
Sbjct: 469 SGLFQVDSSGGTPVPLTTPDAM-RGEDFHYW-PQVLPEGRFLYFARSS----------KP 516

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
               +    F++P    ++ HT+++ +Y    G        +L++  S        +L  
Sbjct: 517 EYTGVYAASFAAPNKPVQLLHTLTNAVYAP--GASDRKKGHLLWLQGS--------TLVA 566

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR-----IDRAP 250
              D A +R     R   + +P  S        A   D  IL     +++      D   
Sbjct: 567 QAFDAAALRLSGEPRP--VADPVASLGLHGQMVAAASDTGILLYRASNSQSQFVWYDPTG 624

Query: 251 KRIGNFRSMILAPRFS--SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           + I  F    +  +FS  ++G+R   +      +D+++V++    + RLT+   I+IS +
Sbjct: 625 RLIAPFAEPAVFGQFSISTDGRRVATARAGSGGVDLWTVEVDRGVSTRLTSLPGISISPA 684

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASY 349
           +S D S I F S       LY   S G+  ++R++Q     +
Sbjct: 685 WSSDGSAIFFASGS--PFNLYRKDSIGAGPEQRLTQSPHPQF 724


>gi|77747590|ref|NP_299539.2| alanyl dipeptidyl peptidase [Xylella fastidiosa 9a5c]
          Length = 688

 Score = 37.4 bits (85), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 53/220 (24%), Positives = 86/220 (39%), Gaps = 38/220 (17%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SA 307
           AP R+      + AP FS +GK       K  +  +Y + +    + +LTN L ++I S 
Sbjct: 77  APVRLTPLGWDVSAPVFSRDGKAVYFLSAKSGSHQLYVLPVSGGTSRQLTN-LAVDIDSY 135

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSD----QKRISQDKEA--------SYFDPVWS 355
             SP   +IVF +         V Q  GSD    ++++ + K A          F   W 
Sbjct: 136 KLSPQGDRIVFSAG--------VFQVCGSDLSCTKRKLDEKKNAKASGVVFEQLFVRHWD 187

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFS 407
              D    T F     A+G            + D ++ +          WSP G S++ S
Sbjct: 188 TWNDGRRNTLFIASLPAVGAKPVSVVSAMSAMLDGDVPSKPFGGADHFVWSPDGHSVVAS 247

Query: 408 -----RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                R++   T   LY  D++G +  +  T   A++P W
Sbjct: 248 IRVAGRQEPWSTNFDLYRFDVSGHDAPVNLT---AANPAW 284


>gi|226226759|ref|YP_002760865.1| prolyl oligopeptidase family protein [Gemmatimonas aurantiaca T-27]
 gi|226089950|dbj|BAH38395.1| prolyl oligopeptidase family protein [Gemmatimonas aurantiaca T-27]
          Length = 748

 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 11/111 (9%)

Query: 283 DIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE------GKEQLYVMQSNG 335
           D+Y +D Q N+ ERLTN    + SA S+SPDS  I F +  +         ++Y+  +  
Sbjct: 288 DVYLLDTQDNSVERLTNNEENSESALSFSPDSKTIAFSASDDMTRFNMKNRRVYLRDAAA 347

Query: 336 SDQK-RISQDKEASYFDPVWSPQGDLIAFT---KFSGEKFAIGVMKKDGSQ 382
             Q  R   D +  +    W+P G  I F+   K + + FA+ V     +Q
Sbjct: 348 KGQAFRKLGDYDGDHSVNFWAPDGRTIYFSTGAKATTQLFALDVASGKTTQ 398


>gi|269836688|ref|YP_003318916.1| hypothetical protein Sthe_0657 [Sphaerobacter thermophilus DSM
           20745]
 gi|269785951|gb|ACZ38094.1| hypothetical protein Sthe_0657 [Sphaerobacter thermophilus DSM
           20745]
          Length = 481

 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 13/117 (11%)

Query: 298 TNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            + L + +  ++SPD  ++   +SD+  +  L +   +GS  +RI    +    DP W+P
Sbjct: 357 AHVLNLKLRIAWSPDGQRVALVQSDQNARPLLLLFDRDGSLVQRIPLGPDGWVVDPQWTP 416

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW------SPSGRSLIFS 407
             +L+    +      + V+  D      +V D  L  P W      SP+G  LI +
Sbjct: 417 DSELLFLQTYPANGRRLVVVDADSG----VVYD--LSQPGWHASGSLSPAGDRLIVT 467


>gi|255009563|ref|ZP_05281689.1| putative exported aminopeptidase [Bacteroides fragilis 3_1_12]
          Length = 694

 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 35/60 (58%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +++ ++       ++T+T F     +++ D S+++F S+  G  QLY M  +GS +K+IS
Sbjct: 76  EVFVMNADGTDNRQITHTPFQENEVTWATDGSKLLFLSNDNGSSQLYEMNPDGSGRKQIS 135


>gi|254515673|ref|ZP_05127733.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [gamma proteobacterium NOR5-3]
 gi|219675395|gb|EED31761.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [gamma proteobacterium NOR5-3]
          Length = 696

 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSR 408
            WSP G  + F    G    IGV   D  Q  ++    ++    +PTWSP GR L F R
Sbjct: 186 AWSPDGSRLLFRSNRGTHSYIGVWTPDDGQGEIVWLSPSVDRDLSPTWSPDGRQLAFLR 244


>gi|94971417|ref|YP_593465.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553467|gb|ABF43391.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 915

 Score = 37.4 bits (85), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 11/133 (8%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           TL+ N     S D +++ F + ++G+  ++V   +  +  ++    E   F P WSP G 
Sbjct: 373 TLYRNGPPELSSDGTRVAFVARKDGQNSIWVRSLDKLEATQVQGTAEG--FRPFWSPDGT 430

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF  F+  K  +  +  +G     + +    +  TW  +G +++F+     +TG  L 
Sbjct: 431 SLAF--FAHAK--LWRVDLNGVAPVAIADAPEGRGGTWG-AGNTIVFAP----NTGGPLM 481

Query: 420 SIDLNGRNETLIN 432
            +D  G   T + 
Sbjct: 482 EVDAAGGAATPVT 494


>gi|313147339|ref|ZP_07809532.1| prolyl oligopeptidase [Bacteroides fragilis 3_1_12]
 gi|313136106|gb|EFR53466.1| prolyl oligopeptidase [Bacteroides fragilis 3_1_12]
          Length = 702

 Score = 37.4 bits (85), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 17/60 (28%), Positives = 35/60 (58%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +++ ++       ++T+T F     +++ D S+++F S+  G  QLY M  +GS +K+IS
Sbjct: 84  EVFVMNADGTDNRQITHTPFQENEVTWATDGSKLLFLSNDNGSSQLYEMNPDGSGRKQIS 143


>gi|326799767|ref|YP_004317586.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphingobacterium sp. 21]
 gi|326550531|gb|ADZ78916.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphingobacterium sp. 21]
          Length = 736

 Score = 37.4 bits (85), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S+SP  S I+F    +GK QL++M  +G +  +++  K  +   P WSP G  I F+
Sbjct: 114 SFSPRGSDILFVRTVKGKPQLFLMSLSGGEPMQLTDFKYGAS-SPKWSPDGKKIVFS 169


>gi|83859759|ref|ZP_00953279.1| hypothetical protein OA2633_07159 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852118|gb|EAP89972.1| hypothetical protein OA2633_07159 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 658

 Score = 37.4 bits (85), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 7/136 (5%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSG 368
           SPD S+  F     G+ QL++M + G    R++     ++F   W+P GD LI      G
Sbjct: 73  SPDGSRAAFRWSITGEPQLWIMDAEGGQPTRLTYGNGITFFR--WTPDGDSLIYGADNDG 130

Query: 369 -EKFAIGVMKKDGSQERLL--VEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            E+ A   +   G  E  +   ED   +    +   G++++F+     +    +Y+ DL 
Sbjct: 131 NEQEAYYRISAVGLHEDQVFPAEDGAFRVFGDFGADGQTIVFASTARNNLDFDIYTADLE 190

Query: 425 GRNETLINTPAYASDP 440
               +++   +YA+ P
Sbjct: 191 TGERSMVYEGSYANYP 206


>gi|262194656|ref|YP_003265865.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262078003|gb|ACY13972.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1607

 Score = 37.4 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 104/237 (43%), Gaps = 25/237 (10%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            V + DG     +    D  ++  RFSP+  ++A A++D    +R++  D   +   + + 
Sbjct: 1170 VWNTDGTGTPLVLRGHDDEIYAVRFSPDGTRIASASWD--KTIRIWNADGTGE--ARVLR 1225

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISASYS 310
               + +    FS +G   LIS  +D  + ++ ++ +S A   L     N L + +SA   
Sbjct: 1226 GHAAALYGVDFSPDGS-FLISASEDTTLRLWPLN-RSGAPLILRGHDANILKVRLSA--- 1280

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             D S++   S  +G  +++   ++G+D   + +  +    D  +SP G  I    F    
Sbjct: 1281 -DGSRVASASS-DGTVRIW--NTDGTDSPVVLRGHQGPVTDAAFSPDGTRIVSASFDK-- 1334

Query: 371  FAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              I +   DG+   +++   D  + A ++SP G  ++       D   +L++ D  G
Sbjct: 1335 -TIRIWSADGTGPPVILHGHDDRVLAASFSPDGTRIV---SASWDATVRLWNADGTG 1387


>gi|262194516|ref|YP_003265725.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262077863|gb|ACY13832.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1190

 Score = 37.4 bits (85), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 16/136 (11%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+  +VA A+YD      + L       AP  +      +L+  FS +G R L S  K
Sbjct: 988  FSPDGARVASASYDRT----ILLWSADGVGAPTVLRGHEDAVLSVNFSPDGTR-LASASK 1042

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--------DREGKEQLYV 330
            D ++ +++ D    +     +    N SAS+SPD S++V  +        + +G  +  V
Sbjct: 1043 DGSVRVWNTDGAGASRIAGKHEAGTN-SASFSPDGSRVVSAAQDATVRVWNADGSGEPVV 1101

Query: 331  MQSNG--SDQKRISQD 344
            ++++G    Q R S D
Sbjct: 1102 LRNHGDWDTQARFSPD 1117


>gi|228470535|ref|ZP_04055394.1| prolyl oligopeptidase family protein [Porphyromonas uenonis 60-3]
 gi|228307758|gb|EEK16729.1| prolyl oligopeptidase family protein [Porphyromonas uenonis 60-3]
          Length = 665

 Score = 37.4 bits (85), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/125 (19%), Positives = 58/125 (46%), Gaps = 11/125 (8%)

Query: 293 ATERLTNTLFINI----SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRIS 342
            T+++T  + + +    S + +P+  Q+V+        D   +  +Y++ S+G+ +  ++
Sbjct: 6   GTKQMTPEMLLTMPRVGSYALAPNGKQVVYNVSQPSIKDNNSRTSIYLINSDGTGRTELT 65

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                S + P WS  G  I F + + +   +      DG++ +L   D  +    +SP  
Sbjct: 66  APSAGSEYTPRWSRDGKQIYFMRGTDQGMQLFARTLSDGAERQLTAIDGGIVDYRFSPDE 125

Query: 402 RSLIF 406
           ++L++
Sbjct: 126 KTLLY 130


>gi|75909181|ref|YP_323477.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75702906|gb|ABA22582.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 1367

 Score = 37.4 bits (85), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 38/225 (16%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+ Q++  A+ D        L D +  R    +    +++ +  FS +G+R +++   
Sbjct: 1025 FSPDGQRILTASPDKT----ARLWDLQ-GRQIAELQGHENVVSSATFSPDGQR-ILTASP 1078

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN---- 334
            D+   ++  DLQ      L        SA +SPD  +I+  SD +   +L+ +Q      
Sbjct: 1079 DKTARLW--DLQGRQIAELQGHKGWLFSAIFSPDGQRILTASD-DKTARLWDLQGRQIAE 1135

Query: 335  ------------GSDQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI--GVMK 377
                          D +RI   S D  A     +W+ QG  IA  KF G K  +      
Sbjct: 1136 LGHKGWLFSATFSPDGQRILTASSDSTAR----LWNLQGREIA--KFQGHKNLVISASFS 1189

Query: 378  KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             DG  +R+L   S+  A  W   GR +   +  +GD  + ++S D
Sbjct: 1190 PDG--QRILTASSDKTARLWELQGREIAKFQGHEGDVITAIFSPD 1232



 Score = 36.6 bits (83), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 98/229 (42%), Gaps = 35/229 (15%)

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            LF   FSP+ Q++  A+ D        L D +  +  K  G+  S+I A  FS +G+R +
Sbjct: 856  LFSATFSPDGQRILTASSDKT----ARLWDLQGRQIAKFQGHENSVISAT-FSPDGQR-I 909

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--------DREGK 325
            +++  D+   ++  DLQ      L        SA++SPD  +I+  S        D +G+
Sbjct: 910  LTLSVDKTARLW--DLQGRQIAELQGHEDWVNSATFSPDGQRILTASSDKTARLWDLQGR 967

Query: 326  EQLYVMQSN---------GSDQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             Q+  +Q +           D +RI   S+D+ A     +W+ QG  IA  KF G +  +
Sbjct: 968  -QIAELQGHEDWVNSATFSPDGQRILTASRDETAR----LWNLQGWQIA--KFQGHENVV 1020

Query: 374  GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                     +R+L    +  A  W   GR +   +  +    S  +S D
Sbjct: 1021 SSATFSPDGQRILTASPDKTARLWDLQGRQIAELQGHENVVSSATFSPD 1069


>gi|229514560|ref|ZP_04404021.1| protease-related protein [Vibrio cholerae TMA 21]
 gi|229348540|gb|EEO13498.1| protease-related protein [Vibrio cholerae TMA 21]
          Length = 1084

 Score = 37.4 bits (85), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D+Y V L S  T+R+T+T       S+S D  ++++ S+REG   LY
Sbjct: 354 DVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLY 400


>gi|332877940|ref|ZP_08445678.1| WD40-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684235|gb|EGJ57094.1| WD40-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 328

 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 48/219 (21%), Positives = 94/219 (42%), Gaps = 23/219 (10%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL--QSNATERL 297
           Y+    + R+ + IG F + IL    S++G +      ++   +I+  DL  Q ++ ++ 
Sbjct: 50  YVCMPEVKRSNRGIGWFSNRIL--DISTDGSQIAYLSFRNNTTNIFIKDLSKQGSSIQKT 107

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWS 355
             T  ++ S  YSPD  QIVF   R    Q++      +D+  + +   +   D  P++S
Sbjct: 108 NRTAVLDFS--YSPDGKQIVFSEARGKTNQIF---QTSADKGFVCRQITSGNMDYSPIYS 162

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
               LI F +   E  +I +   D  Q   L   S    P +   G       + +    
Sbjct: 163 ADMKLIFFAR--QENKSISIWSHD-MQNNFLANYSQGLNP-YPVKGEPAFICVRPNAAGH 218

Query: 416 SKLYSIDL-NGRNETLIN-------TPAYASDPQWVGFM 446
           S+++ ++   G  E +++       +P+ + D QW+ F+
Sbjct: 219 SEIWKVNYETGVEECIVSQPDRDFTSPSISPDGQWLLFV 257


>gi|297579812|ref|ZP_06941739.1| tricorn protease [Vibrio cholerae RC385]
 gi|297535458|gb|EFH74292.1| tricorn protease [Vibrio cholerae RC385]
          Length = 1084

 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D+Y V L S  T+R+T+T       S+S D  ++++ S+REG   LY
Sbjct: 354 DVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLY 400



 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 23/134 (17%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ + G D   +++    S   P+WSP    IAFT    +
Sbjct: 47  SPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSE-TPIWSPDSQSIAFT---AD 98

Query: 370 KFAIG---VMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD--------TGS- 416
           ++ +G   ++   G + R L        P  +S  G+ L FS ++ GD         GS 
Sbjct: 99  RYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSF 158

Query: 417 --KLYSIDLNGRNE 428
             +LYS+   G  E
Sbjct: 159 MAQLYSVPAAGGRE 172


>gi|121585935|ref|ZP_01675728.1| MdsD protein [Vibrio cholerae 2740-80]
 gi|121549871|gb|EAX59891.1| MdsD protein [Vibrio cholerae 2740-80]
          Length = 1001

 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 12/108 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ + G D   +++    S   P+WSP    IAFT    +
Sbjct: 47  SPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSE-TPIWSPDSQSIAFT---AD 98

Query: 370 KFAIG---VMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD 413
           ++ +G   ++   G + R L        P  +S  G+ L FS ++ GD
Sbjct: 99  RYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGD 146



 Score = 37.4 bits (85), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D+Y V L S  T+R+T+T       S+S D  ++++ S+REG   LY
Sbjct: 354 DVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLY 400


>gi|119505342|ref|ZP_01627416.1| acylaminoacyl-peptidase [marine gamma proteobacterium HTCC2080]
 gi|119458797|gb|EAW39898.1| acylaminoacyl-peptidase [marine gamma proteobacterium HTCC2080]
          Length = 698

 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 13/108 (12%)

Query: 310 SPDSSQIVF--------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           SPD  Q+V+        +  R G   L+++ ++G + ++++   E +   P WSP G  I
Sbjct: 56  SPDGRQVVYRRMGFDMMKDKRRG--DLWLVNTDGENHRKLTS-FEGNETSPQWSPDGQRI 112

Query: 362 AFTKFSGEKFAIGVMKK--DGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           A+ + +G++ A   +     G   R+   + +     WSPSG  + F+
Sbjct: 113 AYVRRAGKEGAEIYVHWLVSGHSARITRVEGSPSHLRWSPSGAHIAFA 160


>gi|229522722|ref|ZP_04412138.1| protease-related protein [Vibrio cholerae TM 11079-80]
 gi|229340707|gb|EEO05713.1| protease-related protein [Vibrio cholerae TM 11079-80]
          Length = 1084

 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D+Y V L S  T+R+T+T       S+S D  ++++ S+REG   LY
Sbjct: 354 DVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLY 400



 Score = 37.4 bits (85), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 23/137 (16%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ + G D   +++    S   P+WSP    IAFT    +
Sbjct: 47  SPDGQKIAFTY----AGQIWLVPAQGGDAVALTESCVYSE-TPIWSPDSQSIAFT---AD 98

Query: 370 KFAIG---VMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD--------TGS- 416
           ++ +G   ++   G + R L        P  +S  G+ L FS ++ GD         GS 
Sbjct: 99  RYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSF 158

Query: 417 --KLYSIDLNGRNETLI 431
             +LYS+   G  E  I
Sbjct: 159 MAQLYSVPAAGGREQRI 175


>gi|229526314|ref|ZP_04415718.1| protease-related protein [Vibrio cholerae bv. albensis VL426]
 gi|229336472|gb|EEO01490.1| protease-related protein [Vibrio cholerae bv. albensis VL426]
          Length = 1084

 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D+Y V L S  T+R+T+T       S+S D  ++++ S+REG   LY
Sbjct: 354 DVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLY 400



 Score = 37.0 bits (84), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 23/134 (17%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ + G D   +++    S   P+WSP    IAFT    +
Sbjct: 47  SPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSE-TPIWSPDSQSIAFT---AD 98

Query: 370 KFAIG---VMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD--------TGS- 416
           ++ +G   ++   G + R L        P  +S  G+ L FS ++ GD         GS 
Sbjct: 99  RYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSF 158

Query: 417 --KLYSIDLNGRNE 428
             +LYS+   G  E
Sbjct: 159 MAQLYSVPAAGGRE 172


>gi|255746124|ref|ZP_05420071.1| protease-related protein [Vibrio cholera CIRS 101]
 gi|262158611|ref|ZP_06029725.1| protease-related protein [Vibrio cholerae INDRE 91/1]
 gi|262168976|ref|ZP_06036670.1| protease-related protein [Vibrio cholerae RC27]
 gi|255735878|gb|EET91276.1| protease-related protein [Vibrio cholera CIRS 101]
 gi|262022675|gb|EEY41382.1| protease-related protein [Vibrio cholerae RC27]
 gi|262029491|gb|EEY48141.1| protease-related protein [Vibrio cholerae INDRE 91/1]
          Length = 1039

 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D+Y V L S  T+R+T+T       S+S D  ++++ S+REG   LY
Sbjct: 309 DVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLY 355



 Score = 37.0 bits (84), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 23/134 (17%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ + G D   +++    S   P+WSP    IAFT    +
Sbjct: 2   SPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSE-TPIWSPDSQSIAFT---AD 53

Query: 370 KFAIG---VMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD--------TGS- 416
           ++ +G   ++   G + R L        P  +S  G+ L FS ++ GD         GS 
Sbjct: 54  RYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSF 113

Query: 417 --KLYSIDLNGRNE 428
             +LYS+   G  E
Sbjct: 114 MAQLYSVPAAGGRE 127


>gi|153212767|ref|ZP_01948403.1| tricorn protease [Vibrio cholerae 1587]
 gi|124116280|gb|EAY35100.1| tricorn protease [Vibrio cholerae 1587]
          Length = 1084

 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D+Y V L S  T+R+T+T       S+S D  ++++ S+REG   LY
Sbjct: 354 DVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLY 400



 Score = 37.0 bits (84), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 23/134 (17%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ + G D   +++    S   P+WSP    IAFT    +
Sbjct: 47  SPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSE-TPIWSPDSQSIAFT---AD 98

Query: 370 KFAIG---VMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD--------TGS- 416
           ++ +G   ++   G + R L        P  +S  G+ L FS ++ GD         GS 
Sbjct: 99  RYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSF 158

Query: 417 --KLYSIDLNGRNE 428
             +LYS+   G  E
Sbjct: 159 MAQLYSVPAAGGRE 172


>gi|229527963|ref|ZP_04417354.1| protease-related protein [Vibrio cholerae 12129(1)]
 gi|229334325|gb|EEN99810.1| protease-related protein [Vibrio cholerae 12129(1)]
          Length = 1084

 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D+Y V L S  T+R+T+T       S+S D  ++++ S+REG   LY
Sbjct: 354 DVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLY 400



 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 23/134 (17%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ + G D   +++    S   P+WSP    IAFT    +
Sbjct: 47  SPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSE-TPIWSPDSQSIAFT---AD 98

Query: 370 KFAIG---VMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD--------TGS- 416
           ++ +G   ++   G + R L        P  +S  G+ L FS ++ GD         GS 
Sbjct: 99  RYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSF 158

Query: 417 --KLYSIDLNGRNE 428
             +LYS+   G  E
Sbjct: 159 MAQLYSVPAAGGRE 172


>gi|254224604|ref|ZP_04918220.1| tricorn protease [Vibrio cholerae V51]
 gi|125622667|gb|EAZ50985.1| tricorn protease [Vibrio cholerae V51]
          Length = 1084

 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D+Y V L S  T+R+T+T       S+S D  ++++ S+REG   LY
Sbjct: 354 DVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLY 400



 Score = 37.0 bits (84), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 12/108 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ + G D   +++    S   P+WSP    IAFT    +
Sbjct: 47  SPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSE-TPIWSPDSQSIAFT---AD 98

Query: 370 KFAIG---VMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD 413
           ++ +G   ++   G + R L        P  +S  G+ L FS ++ GD
Sbjct: 99  RYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGD 146


>gi|257389180|ref|YP_003178953.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halomicrobium mukohataei DSM 12286]
 gi|257171487|gb|ACV49246.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halomicrobium mukohataei DSM 12286]
          Length = 596

 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 7/122 (5%)

Query: 307 ASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           ASYSP+  +++F  D  G E  QL+ + ++G+    ++   +A +    WS  G+  AF 
Sbjct: 59  ASYSPERPELIFGKDEGGDERMQLFRLDADGT-ITSLTDSPDAKHRWGGWSHDGERFAFA 117

Query: 365 KFSGEK--FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               ++  F I V  +D  +  L+ E D  L    WSP    L+       +    L+ +
Sbjct: 118 SNRRDESVFDIYVQGRDDDEATLVHEGDGWLTVGGWSPDDTKLLVGEAH-SNVDQDLFVL 176

Query: 422 DL 423
           DL
Sbjct: 177 DL 178


>gi|121729769|ref|ZP_01682207.1| tricorn protease [Vibrio cholerae V52]
 gi|147671883|ref|YP_001214930.1| tricorn protease [Vibrio cholerae O395]
 gi|153816717|ref|ZP_01969384.1| tricorn protease [Vibrio cholerae NCTC 8457]
 gi|227811674|ref|YP_002811684.1| putative tricorn protease [Vibrio cholerae M66-2]
 gi|229506776|ref|ZP_04396285.1| protease-related protein [Vibrio cholerae BX 330286]
 gi|229510429|ref|ZP_04399909.1| protease-related protein [Vibrio cholerae B33]
 gi|229517440|ref|ZP_04406885.1| protease-related protein [Vibrio cholerae RC9]
 gi|229605250|ref|YP_002875954.1| protease-related protein [Vibrio cholerae MJ-1236]
 gi|254850313|ref|ZP_05239663.1| tricorn protease [Vibrio cholerae MO10]
 gi|298499912|ref|ZP_07009718.1| tricorn protease [Vibrio cholerae MAK 757]
 gi|121628491|gb|EAX60978.1| tricorn protease [Vibrio cholerae V52]
 gi|126512736|gb|EAZ75330.1| tricorn protease [Vibrio cholerae NCTC 8457]
 gi|146314266|gb|ABQ18806.1| tricorn protease [Vibrio cholerae O395]
 gi|227010816|gb|ACP07027.1| putative tricorn protease [Vibrio cholerae M66-2]
 gi|227014678|gb|ACP10887.1| putative tricorn protease [Vibrio cholerae O395]
 gi|229345476|gb|EEO10449.1| protease-related protein [Vibrio cholerae RC9]
 gi|229352874|gb|EEO17814.1| protease-related protein [Vibrio cholerae B33]
 gi|229357127|gb|EEO22045.1| protease-related protein [Vibrio cholerae BX 330286]
 gi|229371736|gb|ACQ62158.1| protease-related protein [Vibrio cholerae MJ-1236]
 gi|254846018|gb|EET24432.1| tricorn protease [Vibrio cholerae MO10]
 gi|297541893|gb|EFH77944.1| tricorn protease [Vibrio cholerae MAK 757]
          Length = 1084

 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D+Y V L S  T+R+T+T       S+S D  ++++ S+REG   LY
Sbjct: 354 DVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLY 400



 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 23/134 (17%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ + G D   +++    S   P+WSP    IAFT    +
Sbjct: 47  SPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSE-TPIWSPDSQSIAFT---AD 98

Query: 370 KFAIG---VMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD--------TGS- 416
           ++ +G   ++   G + R L        P  +S  G+ L FS ++ GD         GS 
Sbjct: 99  RYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSF 158

Query: 417 --KLYSIDLNGRNE 428
             +LYS+   G  E
Sbjct: 159 MAQLYSVPAAGGRE 172


>gi|148240656|ref|YP_001226043.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Synechococcus
           sp. WH 7803]
 gi|147849195|emb|CAK24746.1| Dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Synechococcus
           sp. WH 7803]
          Length = 673

 Score = 37.4 bits (85), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 3/71 (4%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVE--DSNLQAPTWSPSGRSLIFSRKKD 411
           SP G  IA+   SG    + V   DG +  R+L +  D   +A +W+  GR LI SR  +
Sbjct: 52  SPDGQRIAYLAPSGGVLNLWVRDLDGDAPARVLTQQRDRPQRAASWTADGRYLISSRDAE 111

Query: 412 GDTGSKLYSID 422
           GD  + L  ID
Sbjct: 112 GDENTVLVRID 122


>gi|46445859|ref|YP_007224.1| hypothetical protein pc0225 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399500|emb|CAF22949.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 649

 Score = 37.4 bits (85), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 11/89 (12%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-----FRSMILAPRFSSNGKR 271
           PR SPN Q +AY   D +++L V+L + +     +++        RS +    +  +G  
Sbjct: 45  PRLSPNGQYLAYLAPDAQNVLNVWLKNLKTAEKDRQVTTDKKRGIRSFL----WQFDGDH 100

Query: 272 ALISVQK--DEAMDIYSVDLQSNATERLT 298
            L    K  DE   +Y   +QSN T  LT
Sbjct: 101 ILYEQDKDGDENWHLYQTHIQSNLTRDLT 129


>gi|262190170|ref|ZP_06048451.1| protease-related protein [Vibrio cholerae CT 5369-93]
 gi|262033945|gb|EEY52404.1| protease-related protein [Vibrio cholerae CT 5369-93]
          Length = 1039

 Score = 37.4 bits (85), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D+Y V L S  T+R+T+T       S+S D  ++++ S+REG   LY
Sbjct: 309 DVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLY 355



 Score = 37.0 bits (84), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 12/108 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ + G D   +++    S   P+WSP    IAFT    +
Sbjct: 2   SPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSE-TPIWSPDSQSIAFT---AD 53

Query: 370 KFAIG---VMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD 413
           ++ +G   ++   G + R L        P  +S  G+ L FS ++ GD
Sbjct: 54  RYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGD 101


>gi|227326738|ref|ZP_03830762.1| hypothetical protein PcarcW_05204 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 379

 Score = 37.4 bits (85), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 11/109 (10%)

Query: 310 SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKF 366
           SPD S+I F   D  G  QL+++  NG + +++++ +    S F+  W P G  +AF   
Sbjct: 266 SPDGSEIAFLMRDEAGVVQLWMISPNGGEPRQVTRTEHGVQSAFN--WHPSGCSLAFVC- 322

Query: 367 SGEKFAIGVMKKDGSQERLLVE-DS--NLQAPTWSPSGRSLIFSRKKDG 412
             +   +    K G   RL    DS  +  A  +SP G+ + + R+ DG
Sbjct: 323 --DNSIMLCDAKSGELTRLTARTDSAPSADAVVFSPDGKQIAYMREIDG 369


>gi|153803128|ref|ZP_01957714.1| tricorn protease [Vibrio cholerae MZO-3]
 gi|124121347|gb|EAY40090.1| tricorn protease [Vibrio cholerae MZO-3]
          Length = 1084

 Score = 37.4 bits (85), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D+Y V L S  T+R+T+T       S+S D  ++++ S+REG   LY
Sbjct: 354 DVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLY 400



 Score = 37.0 bits (84), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 23/134 (17%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ + G D   +++    S   P+WSP    IAFT    +
Sbjct: 47  SPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSE-TPIWSPDSQSIAFT---AD 98

Query: 370 KFAIG---VMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD--------TGS- 416
           ++ +G   ++   G + R L        P  +S  G+ L FS ++ GD         GS 
Sbjct: 99  RYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSF 158

Query: 417 --KLYSIDLNGRNE 428
             +LYS+   G  E
Sbjct: 159 MAQLYSVPAAGGRE 172


>gi|295083922|emb|CBK65445.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Bacteroides
           xylanisolvens XB1A]
          Length = 692

 Score = 37.4 bits (85), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 6/88 (6%)

Query: 283 DIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKE----QLYVMQSNGS 336
           DIY  DL +  TE +T      + +  YSPD   I ++S +R+G E    +L++M     
Sbjct: 261 DIYVYDLNTQKTENITEENKGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETG 320

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +++ +S+  E++    VW     +I FT
Sbjct: 321 EKRFVSKAFESNVDAFVWGADAKMIYFT 348


>gi|170754274|ref|YP_001781472.1| putative lipoprotein [Clostridium botulinum B1 str. Okra]
 gi|169119486|gb|ACA43322.1| putative lipoprotein [Clostridium botulinum B1 str. Okra]
          Length = 357

 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 71/157 (45%), Gaps = 20/157 (12%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQLYVM 331
           S+Q  E M IY  DL++    ++ + + ++ S     +  +I++    S++E K ++Y  
Sbjct: 139 SLQSAEGMKIY--DLENKKEIKIKSDVLVSGSLFKWLNEDEILYYGINSEKENKAKIY-- 194

Query: 332 QSNGSDQKRISQDKEASYFDPV------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                 +  + ++KE  Y D +      + P GD +      G+KF +    K  +  + 
Sbjct: 195 ------KYNVKENKEEVYVDNIEGICTYFMPNGDNVLLLSRQGDKFNLSYYNKKDNSFKK 248

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           + E+ N Q    + S +++ F  K D +    LY ID
Sbjct: 249 ISEEVN-QVYKGTKSTKNMYFLGKNDLENKDYLYKID 284


>gi|254284774|ref|ZP_04959741.1| tricorn protease [Vibrio cholerae AM-19226]
 gi|150425559|gb|EDN17335.1| tricorn protease [Vibrio cholerae AM-19226]
          Length = 1084

 Score = 37.4 bits (85), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D+Y V L S  T+R+T+T       S+S D  ++++ S+REG   LY
Sbjct: 354 DVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLY 400



 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 59/134 (44%), Gaps = 23/134 (17%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ + G D   +++    S   P+WSP    IAFT    +
Sbjct: 47  SPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSE-TPIWSPDSQSIAFT---AD 98

Query: 370 KFAIG---VMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD--------TGS- 416
           ++ +G   ++   G + R L        P  +S  G+ L FS ++ GD         GS 
Sbjct: 99  RYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSF 158

Query: 417 --KLYSIDLNGRNE 428
             +LYS+   G  E
Sbjct: 159 MAQLYSVPAAGGRE 172


>gi|302810344|ref|XP_002986863.1| hypothetical protein SELMODRAFT_182691 [Selaginella moellendorffii]
 gi|300145268|gb|EFJ11945.1| hypothetical protein SELMODRAFT_182691 [Selaginella moellendorffii]
          Length = 603

 Score = 37.4 bits (85), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 46/97 (47%), Gaps = 1/97 (1%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           F   + + SPD+   +   D++GK  L+ +  +G  Q+ + +   AS     +SP G + 
Sbjct: 445 FTATAVAVSPDAKAAIV-GDKDGKLHLFSLGEDGLHQEALLERHRASVTALEFSPDGTMF 503

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           A    + E F    +K++   + +L   +++Q   W+
Sbjct: 504 ASGDQNREAFVWDAVKREVKLKNMLYHTTSIQCIAWA 540


>gi|289580244|ref|YP_003478710.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
 gi|289529797|gb|ADD04148.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
          Length = 668

 Score = 37.4 bits (85), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 6/115 (5%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQD--KEASYFDPVWSPQGDLIAFTKF 366
           SPD S+I F  D  G+ +L+V+    G+ ++    D  + A +F   W   GD + F + 
Sbjct: 30  SPDGSEIAFYYDETGRNELHVLDVETGTLEQWSDGDVPRNARWF-LRWDADGDRVFFHQD 88

Query: 367 SG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            G  E+  I  + + G+ E ++  D        S  G SL+F+  +DG   +  Y
Sbjct: 89  EGGDEQNDIYALSRAGAVESVVEIDGQAVLNDVSDDGESLLFTSNRDGQMNAYRY 143


>gi|170727653|ref|YP_001761679.1| peptidase S41 [Shewanella woodyi ATCC 51908]
 gi|169813000|gb|ACA87584.1| peptidase S41 [Shewanella woodyi ATCC 51908]
          Length = 1097

 Score = 37.4 bits (85), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 75/154 (48%), Gaps = 17/154 (11%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFT 364
           SA  SPD S +   SD  G+++++   ++GS   K++++D          SP G  IA  
Sbjct: 360 SAVMSPDGSWVYGISDASGEQEIWRFPADGSQGAKQLTKDGTTLRMGIKLSPDGRYIATD 419

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSK--L 418
            ++G+ + + +  K    ++++ +   L  P     WS   + +  ++ + G    +  L
Sbjct: 420 DYNGDLWLLDL--KRNRTKKIITQGEGL-GPYADVVWSGDSQYIAVTKFELGTPRPQVVL 476

Query: 419 YSIDLNGRNETLIN------TPAYASDPQWVGFM 446
           YS+D + R+E L +       PA++ D QW+ F+
Sbjct: 477 YSLD-DDRSEALTSDKYESYAPAFSPDGQWLYFL 509


>gi|315128132|ref|YP_004070135.1| hypothetical protein PSM_A3070 [Pseudoalteromonas sp. SM9913]
 gi|315016645|gb|ADT69983.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 937

 Score = 37.0 bits (84), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P  SP++ K+AY +    +  ++Y+     D R    + N    +  P FS NG+     
Sbjct: 470 PTLSPDETKLAYLSASLNENWQLYIQGVGGDTRESVPMPNGYQYLSQPSFSQNGESIYFV 529

Query: 276 VQKDEAMDIYSVDLQSNATERLTN 299
              +   DIY+  +++N   RLTN
Sbjct: 530 AGLNNKTDIYNYHIKNNTLTRLTN 553


>gi|145528438|ref|XP_001450017.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417609|emb|CAK82620.1| unnamed protein product [Paramecium tetraurelia]
          Length = 933

 Score = 37.0 bits (84), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 42/194 (21%), Positives = 79/194 (40%), Gaps = 29/194 (14%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWDVK  +Q I             ++HT +  +Y S+     D          ++ SG
Sbjct: 570 LRLWDVKSGQQNI-----------ELVSHTST--VY-SVCFSPDDI---------TLASG 606

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               S+ + D    N +      +  ++   FSP+   +A  +YD      + L D +  
Sbjct: 607 SADKSIRLWDVKTGNQKAKLDGHNSTVYSINFSPDGATLASGSYDKS----IRLWDVKTG 662

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
               ++    S I +  FS +GK  L S   D+++ ++ V ++    +   ++  +  S 
Sbjct: 663 NQKAKLDGHNSTIQSVCFSPDGK-TLASGSDDDSIRLWDVQIEQEKAKLDGHSCAVQ-SV 720

Query: 308 SYSPDSSQIVFESD 321
            +SPD + +   SD
Sbjct: 721 CFSPDGTTLASGSD 734


>gi|15600815|ref|NP_232445.1| hypothetical protein VCA0044 [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|9657426|gb|AAF95958.1| hypothetical protein VC_A0044 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
          Length = 714

 Score = 37.0 bits (84), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 12/108 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I F        Q++++ + G D   +++    S   P+WSP    IAFT    +
Sbjct: 47  SPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSE-TPIWSPDSQSIAFT---AD 98

Query: 370 KFAIG---VMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD 413
           ++ +G   ++   G + R L        P  +S  G+ L FS ++ GD
Sbjct: 99  RYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGD 146



 Score = 37.0 bits (84), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D+Y V L S  T+R+T+T       S+S D  ++++ S+REG   LY
Sbjct: 354 DVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLY 400


>gi|218440929|ref|YP_002379258.1| hypothetical protein PCC7424_4016 [Cyanothece sp. PCC 7424]
 gi|218173657|gb|ACK72390.1| WD40 domain protein beta Propeller [Cyanothece sp. PCC 7424]
          Length = 169

 Score = 37.0 bits (84), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 12/148 (8%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +++   D A + + +F S  L P+ SS  +  + +  ++ + D+Y  D Q+    +L NT
Sbjct: 25  ILNFPFDAAGRSLNSFASE-LTPQVSS--RFIVFTSDRNGSQDVYLYDAQN---RQLVNT 78

Query: 301 LFINI------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             +N         + S D   IVFE+ R+G+  +++       ++ ++    A   +P  
Sbjct: 79  PGLNSLDEIASHPAISEDGRYIVFEASRQGRTGIFLYDRQTQQKRNLTASLPAQVRNPTI 138

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           S  G  IAF      ++ + V  + G Q
Sbjct: 139 SADGTTIAFEVAKDGQWDLMVYNRSGQQ 166


>gi|153829269|ref|ZP_01981936.1| tricorn protease [Vibrio cholerae 623-39]
 gi|148875234|gb|EDL73369.1| tricorn protease [Vibrio cholerae 623-39]
          Length = 890

 Score = 37.0 bits (84), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           D+Y V L S  T+R+T+T       S+S D  ++++ S+REG   LY
Sbjct: 354 DVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLY 400


>gi|159896754|ref|YP_001543001.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Herpetosiphon aurantiacus ATCC 23779]
 gi|159889793|gb|ABX02873.1| Periplasmic component of the Tol biopolymer transport system-like
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 537

 Score = 37.0 bits (84), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 13/89 (14%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI------ 405
           WSP G  +AF    G K  I +   DGS  R ++E  N+  Q+ +WSP            
Sbjct: 269 WSPDGKTMAFFVRDGAKTNIYLADGDGSNSRSVIELQNMAPQSLSWSPDSSKFAFITSDI 328

Query: 406 -FSRKKDGDTGSKLYSIDLNGRNETLINT 433
            F  K+D      LY  DL   NE  + T
Sbjct: 329 DFETKED----QNLYVYDLASNNEKQLTT 353



 Score = 36.6 bits (83), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 2/70 (2%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQ 332
           I  +  E  ++Y  DL SN  ++LT T  I+    S+SPD+  I+F + ++G E   V+ 
Sbjct: 328 IDFETKEDQNLYVYDLASNNEKQLTTTGLIDFDPLSWSPDNQTILFAAGQDGIE-FNVIN 386

Query: 333 SNGSDQKRIS 342
           ++GS+  +++
Sbjct: 387 ADGSNLAKLA 396


>gi|119469696|ref|ZP_01612565.1| hypothetical protein ATW7_15839 [Alteromonadales bacterium TW-7]
 gi|119446943|gb|EAW28214.1| hypothetical protein ATW7_15839 [Alteromonadales bacterium TW-7]
          Length = 941

 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA---PKRIGNFRSMILAPRFSSNGKRAL 273
           P  SP+ +K+ Y +    +  ++Y+ D  +D     P  + N    +  P FS NG+   
Sbjct: 470 PTLSPDNKKLVYLSASLNENWQMYIQD--VDGGISQPVPMPNGYQYLTQPSFSDNGESIY 527

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTN 299
                ++  DIY+  + SN  +RLT+
Sbjct: 528 FVAGLNKTTDIYNYHIASNTLKRLTH 553


>gi|160874428|ref|YP_001553744.1| peptidase S41 [Shewanella baltica OS195]
 gi|160859950|gb|ABX48484.1| peptidase S41 [Shewanella baltica OS195]
 gi|315266664|gb|ADT93517.1| peptidase S41 [Shewanella baltica OS678]
          Length = 1094

 Score = 37.0 bits (84), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+++  L   A  RLT+     + A+ S D   + + ++ EG  ++YV+   G   KR+S
Sbjct: 51  DLWTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVYVIPVAGGVAKRVS 110

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
            +         W+P+G+++  T
Sbjct: 111 FENSRVRVQG-WTPKGEILYST 131


>gi|258649216|ref|ZP_05736685.1| prolyl oligopeptidase family protein [Prevotella tannerae ATCC
           51259]
 gi|260850481|gb|EEX70350.1| prolyl oligopeptidase family protein [Prevotella tannerae ATCC
           51259]
          Length = 714

 Score = 37.0 bits (84), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 17/62 (27%), Positives = 37/62 (59%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +Y++ L + A++ LT + +      +      I+F S+  G  QL++M ++GS++++IS 
Sbjct: 76  LYAMALSNKASKLLTASSYNERGGVFVNQGKSIIFLSNASGSSQLWMMNADGSNRQQISH 135

Query: 344 DK 345
           +K
Sbjct: 136 EK 137


>gi|170758209|ref|YP_001787304.1| putative lipoprotein [Clostridium botulinum A3 str. Loch Maree]
 gi|169405198|gb|ACA53609.1| putative lipoprotein [Clostridium botulinum A3 str. Loch Maree]
          Length = 357

 Score = 37.0 bits (84), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 20/164 (12%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQLYVM 331
           S+Q  E M IY  DL++    ++ + + ++ +     +  +I++    S++E K ++Y  
Sbjct: 139 SLQSAEGMKIY--DLENKKEIKIKSDVLVSGNLFKWLNEDEILYYGINSEKENKAKIY-- 194

Query: 332 QSNGSDQKRISQDKEASYFDPV------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                 +  + ++KE  Y D +      + P GD +      G+KF +    K  +  + 
Sbjct: 195 ------KYNVKENKEEVYVDNIEGICTYFMPNGDNVLLLSSQGDKFNLSYYNKKDNSFKK 248

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           + E+ N Q    + S +++ F  K D +    LY ID N  N T
Sbjct: 249 ISEEVN-QIYKGTKSIKNMYFLGKNDLENKDYLYKIDGNTLNLT 291


>gi|212635429|ref|YP_002311954.1| peptidase [Shewanella piezotolerans WP3]
 gi|212556913|gb|ACJ29367.1| Peptidase [Shewanella piezotolerans WP3]
          Length = 710

 Score = 37.0 bits (84), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 11/98 (11%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEA-----MDIYSVDLQSNAT--ERLTNTLFIN 304
           +I    S +L    S +G + + +V+  +A      D+Y  DL SNA   +++T      
Sbjct: 61  KINKLHSAVL----SHDGTKVVYAVKNVDADGKASSDLYIQDLNSNAATAKQITQFSGTE 116

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            S ++ P+   I F + R+G  QLY +  +G + ++++
Sbjct: 117 HSVAFGPNDKSIYFLAARDGSSQLYQLALDGGEARQVT 154


>gi|124008195|ref|ZP_01692892.1| WD-40 repeat [Microscilla marina ATCC 23134]
 gi|123986294|gb|EAY26116.1| WD-40 repeat [Microscilla marina ATCC 23134]
          Length = 743

 Score = 37.0 bits (84), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 55/126 (43%), Gaps = 9/126 (7%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V   DG  IR L   R  I F  RFSPN  K+  A+ D     R   + +   R   R+ 
Sbjct: 429 VWSLDGKIIRDLKRHRRAI-FSARFSPNGSKIVTASAD-----RTARIWSFTGRQLHRLK 482

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             R  + A  FS NG+  +++  +D    ++ V     +T +  N+ F    A +SP+  
Sbjct: 483 GHRKAVYAATFSPNGQY-ILTASEDNTAKLWDVQGTKVSTLKSENSPF--SYAVFSPNGR 539

Query: 315 QIVFES 320
            I+  S
Sbjct: 540 YILTAS 545


>gi|154493660|ref|ZP_02032980.1| hypothetical protein PARMER_03000 [Parabacteroides merdae ATCC
           43184]
 gi|154086870|gb|EDN85915.1| hypothetical protein PARMER_03000 [Parabacteroides merdae ATCC
           43184]
          Length = 708

 Score = 37.0 bits (84), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 8/104 (7%)

Query: 310 SPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD  ++V+        +     +++VM ++G+D K+I++    S  + VW   G  IAF
Sbjct: 69  SPDGQKVVYTVAYYSVPENRSNREVFVMNADGTDNKQITK-TSYSENEAVWIKGGKKIAF 127

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
                    +  M  DGS  R L E + +++   +SP  + ++F
Sbjct: 128 LCNESGSSQLWEMNPDGSDRRQLSEYEGDIEGFAFSPDEKKVLF 171


>gi|320451194|ref|YP_004203290.1| acylamino-acid-releasing enzyme [Thermus scotoductus SA-01]
 gi|320151363|gb|ADW22741.1| acylamino-acid-releasing enzyme [Thermus scotoductus SA-01]
          Length = 602

 Score = 37.0 bits (84), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 41/203 (20%)

Query: 280 EAMDIYSVDLQSNATERLTNT--------------LFINISASYSPDSSQIV----FESD 321
           E  +++ +DL+    ERLT T              +F+ +  +  P S ++     F+ D
Sbjct: 75  EVQELFRLDLRGGEAERLTETPGVLDYALGPEGEVVFLALKEAPKPGSPRVYEGWPFKFD 134

Query: 322 -----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---I 373
                 EG   LY ++     QK++  D+  +  D V SP+G  +   +  G +      
Sbjct: 135 GRGLLPEGNVALYALEGG---QKKLLLDRYPAPRDMVPSPEGLYLVMAEDKGAQAEWRDT 191

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI-FSRKKDGDTGSKLYSID-------LNG 425
             + K+G  +++      + A  WSP G   +  + ++ G T ++LY +          G
Sbjct: 192 LYLLKEGRLQKVYGGFGPIFALEWSPEGLFFLGHAFERGGGTEARLYHLHGGEVRVLFEG 251

Query: 426 RNETLINT----PAYASDPQWVG 444
             +  IN+     A+   P+W G
Sbjct: 252 SLQNSINSDLRHGAHTQGPRWAG 274


>gi|116624929|ref|YP_827085.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228091|gb|ABJ86800.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 893

 Score = 37.0 bits (84), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 56/114 (49%), Gaps = 10/114 (8%)

Query: 228 YATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           Y     ED LR ++L+D + +  P  +   R     PR S +G R  +++++  +  I+ 
Sbjct: 589 YVPTRPEDQLRPIFLIDEKGNSEPLPVAKARYG--RPRISPDGSRFAVAIREGTSSQIWI 646

Query: 287 VDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGK-EQLYVMQSNGS 336
            + +S    RL+   F N   I   ++PD   +VF SD +     +Y M+++G+
Sbjct: 647 YEWRSR---RLSRFAFPNGNSIFPVWTPDGKYLVFSSDTQNPGPGIYWMRADGA 697


>gi|196015143|ref|XP_002117429.1| hypothetical protein TRIADDRAFT_61488 [Trichoplax adhaerens]
 gi|190579958|gb|EDV20045.1| hypothetical protein TRIADDRAFT_61488 [Trichoplax adhaerens]
          Length = 1302

 Score = 37.0 bits (84), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 9/127 (7%)

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            L+E +F  N   V YA +D+++ L++Y    +  +   +   F   I A   S+NGK+  
Sbjct: 939  LYECKFIENCL-VVYAVHDEKNRLKMYAGTDKEFKLISKYSTFGHRITAICISNNGKQVA 997

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTL----FINISASYSPDSSQIVFESDREGKEQLY 329
            I   +   + + S +   N    +   L     I +    S D++ IV    ++G  QL+
Sbjct: 998  IGFSEAGGVQLLSANDIKNCLWHVKGNLCEMTCITLIKFSSNDNNLIV----KDGNRQLF 1053

Query: 330  VMQSNGS 336
            V+ S G+
Sbjct: 1054 VLSSTGA 1060


>gi|126173470|ref|YP_001049619.1| peptidase S41 [Shewanella baltica OS155]
 gi|125996675|gb|ABN60750.1| peptidase S41 [Shewanella baltica OS155]
          Length = 1094

 Score = 37.0 bits (84), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+++  L   A  RLT+     + A+ S D   + + ++ EG  ++YV+   G   KR+S
Sbjct: 51  DLWTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVYVIPVAGGVAKRVS 110

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
            +         W+P+G+++  T
Sbjct: 111 FENSRVRVQG-WTPKGEILYST 131


>gi|322437539|ref|YP_004219629.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321165432|gb|ADW71135.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 246

 Score = 37.0 bits (84), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 14/135 (10%)

Query: 325 KEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGS 381
           +E+L+  ++ +GSD+ +++ D     F   WSP G  +A    + +G      +    G 
Sbjct: 7   QEKLWRARALDGSDKVQLTSDS-LEVFLAHWSPDGKQLAIMAKEHNGVWQNYIIDAAGGK 65

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKLYSI-DL-NGRNETL-----I 431
            E LL E  N   P WS  G  ++F R+ D    +TGS    I DL   + ET+     +
Sbjct: 66  PEPLLHEARNAADPGWSADGSKIVFGREPDLMGKETGSHTIQILDLATHQTETVPGSEGL 125

Query: 432 NTPAYASDPQWVGFM 446
            +P ++ D +W+  +
Sbjct: 126 FSPRWSPDGRWIAAL 140


>gi|115373641|ref|ZP_01460936.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|310824959|ref|YP_003957317.1| hypothetical protein STAUR_7735 [Stigmatella aurantiaca DW4/3-1]
 gi|115369344|gb|EAU68284.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|309398031|gb|ADO75490.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1196

 Score = 37.0 bits (84), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 16/162 (9%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           RLT  +  +      PD  +++F S+R    ++Y     G  ++R+  D+ A    P  S
Sbjct: 36  RLTVGMGDHFLGQLEPDGKRLIFVSNRNIATEIYAQDLEGGRERRLF-DEGADVTWPRIS 94

Query: 356 PQGDLIAFTKF---SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK-D 411
           P G  + +  F   +G +  +  +     + R L E+S+     W  +    + SR    
Sbjct: 95  PDGKHLLYISFRDQAGGQLCVRTLPA-AEERRCLDEESSAVQAEWIDASHVALVSRAAIQ 153

Query: 412 G-------DTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           G       D   KL +  L  RN   + +PA + D +W+ ++
Sbjct: 154 GDLHLSRVDVALKLSAKPLLERN---LTSPALSPDGRWLVYV 192


>gi|238750281|ref|ZP_04611783.1| hypothetical protein yrohd0001_12160 [Yersinia rohdei ATCC 43380]
 gi|238711514|gb|EEQ03730.1| hypothetical protein yrohd0001_12160 [Yersinia rohdei ATCC 43380]
          Length = 428

 Score = 37.0 bits (84), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 11/111 (9%)

Query: 310 SPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD S I    +D  G  QL+++  NG + ++++  +        W PQG  +AF     
Sbjct: 314 SPDGSAIACLMADDNGVVQLWLVSPNGGEPRQLTATESGIQSAFSWHPQGQSLAFIS--- 370

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKDGDT 414
           +   +      G  +RL     +LQAP      +SP G  + F R+  G T
Sbjct: 371 DNSVMQCEVATGQLQRLTAR--SLQAPLADAVVFSPDGSKIAFMREIAGFT 419


>gi|157375494|ref|YP_001474094.1| peptidase S9 prolyl oligopeptidase [Shewanella sediminis HAW-EB3]
 gi|157317868|gb|ABV36966.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sediminis HAW-EB3]
          Length = 684

 Score = 37.0 bits (84), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 7/90 (7%)

Query: 260 ILAPRFSSNGKRALISVQK-----DEAMDIYSVDLQS--NATERLTNTLFINISASYSPD 312
           + +P  S++G + + +V+K     + + D+Y  DL    +  ++LT+      S +++ D
Sbjct: 38  LHSPALSNDGSKIVYAVKKFDAEGESSSDLYIQDLSQADSKAKQLTSVKGTEHSVAFAAD 97

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
              I F + R G  QLY +  NG +  +IS
Sbjct: 98  DQSIYFLAGRSGSSQLYKLSLNGGEAIQIS 127


>gi|255691544|ref|ZP_05415219.1| prolyl oligopeptidase family protein [Bacteroides finegoldii DSM
           17565]
 gi|260622936|gb|EEX45807.1| prolyl oligopeptidase family protein [Bacteroides finegoldii DSM
           17565]
          Length = 700

 Score = 37.0 bits (84), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 38/161 (23%), Positives = 74/161 (45%), Gaps = 22/161 (13%)

Query: 283 DIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKE----QLYVMQSNGS 336
           DIY  DL +  TE +T      + +  YSPD   I ++S +R+G E    +L++M     
Sbjct: 269 DIYIYDLNTKKTENITEENKGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETG 328

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +++ +S+  E++    VW     +I FT         GV   +     L + + +++A T
Sbjct: 329 EKRFVSKAFESNVDAFVWGADAKVIYFT---------GVWHGESQIYALDLANDSVKAIT 379

Query: 397 ---WSPSGRSL----IFSRKKDGDTGSKLYSIDLNGRNETL 430
              +   G +L    + +++     G ++Y++ L+G    L
Sbjct: 380 SGMYDYEGVALFGDKLIAKRHSMSMGDEIYTVALDGSTTQL 420


>gi|116622762|ref|YP_824918.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225924|gb|ABJ84633.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 841

 Score = 37.0 bits (84), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 14/104 (13%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +EQ +  QS G           A  F P  SP G  IAF      +  + +MK +     
Sbjct: 307 QEQFWSGQSLGG---------PAQAFGPRVSPDGQTIAFQAMVDGQTQVAIMKPESGNWT 357

Query: 385 LLVEDSNL---QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +L    NL   Q  TWS  G  L F R  D   G  ++S+ L G
Sbjct: 358 VLTHQKNLGQIQDITWSRDGSKLYFDRVTDTPRG--VFSVPLLG 399


>gi|240172096|ref|ZP_04750755.1| WD-40-like beta propeller repeat-containing protein [Mycobacterium
           kansasii ATCC 12478]
          Length = 339

 Score = 37.0 bits (84), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 8/102 (7%)

Query: 309 YSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTK 365
           YS D  +IV++ S   G+  L+V  +N ++ ++++  +D  A +  P +SP G  IA+T 
Sbjct: 236 YSRDGKKIVYQLSVSRGRNALFVADANFTNPRKLADLKDPRAEWTLPTFSPDGTQIAYTD 295

Query: 366 --FSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGR 402
             F     AI V+  DGS  R + +        +P+W  + R
Sbjct: 296 TLFDVGAQAIFVVNADGSGVRQVSKPQRGDYHTSPSWGYAAR 337


>gi|217974238|ref|YP_002358989.1| peptidase S41 [Shewanella baltica OS223]
 gi|217499373|gb|ACK47566.1| peptidase S41 [Shewanella baltica OS223]
          Length = 1094

 Score = 37.0 bits (84), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+++  L   A  RLT+     + A+ S D   + + ++ EG  ++YV+   G   KR+S
Sbjct: 51  DLWTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVYVIPVAGGVAKRVS 110

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
            +         W+P+G+++  T
Sbjct: 111 FENSRVRVQG-WTPKGEILYST 131


>gi|127512833|ref|YP_001094030.1| peptidase S9 prolyl oligopeptidase [Shewanella loihica PV-4]
 gi|126638128|gb|ABO23771.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella loihica PV-4]
          Length = 685

 Score = 37.0 bits (84), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 5/83 (6%)

Query: 265 FSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            S++G + + +V+K     +   D+Y   L     +RLT+      S ++S D  +I F 
Sbjct: 47  LSNDGTKIVYAVKKFDDKGEAQSDLYLQSLIDGKVKRLTSAKGTEHSVAFSADDKKIYFL 106

Query: 320 SDREGKEQLYVMQSNGSDQKRIS 342
           + R+G  QLY +  +G +  +IS
Sbjct: 107 AARDGSSQLYELALDGGEAVKIS 129


>gi|53713897|ref|YP_099889.1| putative peptidase [Bacteroides fragilis YCH46]
 gi|52216762|dbj|BAD49355.1| putative peptidase [Bacteroides fragilis YCH46]
          Length = 702

 Score = 37.0 bits (84), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 16/61 (26%), Positives = 36/61 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +++ ++       ++T+T +     +++ D S+++F S+  G  QLY M  +GS +K+IS
Sbjct: 84  EVFVMNADGTDNRQITHTPYQENEVTWAADGSKLLFLSNDNGSSQLYEMNPDGSGRKQIS 143

Query: 343 Q 343
           +
Sbjct: 144 K 144


>gi|60682106|ref|YP_212250.1| putative exported aminopeptidase [Bacteroides fragilis NCTC 9343]
 gi|265764242|ref|ZP_06092810.1| prolyl oligopeptidase [Bacteroides sp. 2_1_16]
 gi|60493540|emb|CAH08327.1| putative exported aminopeptidase [Bacteroides fragilis NCTC 9343]
 gi|263256850|gb|EEZ28196.1| prolyl oligopeptidase [Bacteroides sp. 2_1_16]
          Length = 702

 Score = 37.0 bits (84), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 16/61 (26%), Positives = 36/61 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +++ ++       ++T+T +     +++ D S+++F S+  G  QLY M  +GS +K+IS
Sbjct: 84  EVFVMNADGTDNRQITHTPYQENEVTWAADGSKLLFLSNDNGSSQLYEMNPDGSGRKQIS 143

Query: 343 Q 343
           +
Sbjct: 144 K 144


>gi|313677495|ref|YP_004055491.1| prolyl oligopeptidase [Marivirga tractuosa DSM 4126]
 gi|312944193|gb|ADR23383.1| secreted prolyl oligopeptidase family protein [Marivirga tractuosa
           DSM 4126]
          Length = 632

 Score = 37.0 bits (84), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 5/114 (4%)

Query: 303 INISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           IN S  Y S D S+++  S+  G   LY + ++G+    +S + E S+F   + P+ D I
Sbjct: 44  INYSGGYFSHDESKLLVSSNATGIYNLYALHTDGTLVDTLSNNTEESWFANSYFPKDDRI 103

Query: 362 AFT--KFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIF-SRKKD 411
            F+  K   E   I ++ +DG+   L  E++   +   WS   +S  + S K+D
Sbjct: 104 LFSADKGGNEISHIYLLDEDGNVIDLTPEENEKASFAGWSKDLKSFEYISNKRD 157


>gi|301163576|emb|CBW23127.1| putative exported aminopeptidase [Bacteroides fragilis 638R]
          Length = 702

 Score = 37.0 bits (84), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 16/61 (26%), Positives = 36/61 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +++ ++       ++T+T +     +++ D S+++F S+  G  QLY M  +GS +K+IS
Sbjct: 84  EVFVMNADGTDNRQITHTPYQENEVTWAADGSKLLFLSNDNGSSQLYEMNPDGSGRKQIS 143

Query: 343 Q 343
           +
Sbjct: 144 K 144


>gi|311746889|ref|ZP_07720674.1| putative peptidase [Algoriphagus sp. PR1]
 gi|311302584|gb|EAZ82740.2| putative peptidase [Algoriphagus sp. PR1]
          Length = 788

 Score = 36.6 bits (83), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 17/115 (14%)

Query: 257 RSMILA-PRFSSNGKRALISVQKDEAMD--IYSVDLQSNATERLTNTL------------ 301
           R +IL+ P FS NG++A+I+++  +  D  I  +DL +   + L                
Sbjct: 327 RDVILSQPYFSPNGEKAIINIRSADNKDRWIAEIDLTTGTLKTLDRQRDEAWIAGPGIGW 386

Query: 302 -FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            F   +  + PD+  I F+S+  G   LY++     ++K ++       FDP  S
Sbjct: 387 SFSGGTMGWLPDNKHIYFQSEESGYSHLYLLDVTTGEKKALTSGN-YEVFDPFLS 440


>gi|253567110|ref|ZP_04844561.1| prolyl oligopeptidase [Bacteroides sp. 3_2_5]
 gi|251944234|gb|EES84743.1| prolyl oligopeptidase [Bacteroides sp. 3_2_5]
          Length = 702

 Score = 36.6 bits (83), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 16/61 (26%), Positives = 36/61 (59%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +++ ++       ++T+T +     +++ D S+++F S+  G  QLY M  +GS +K+IS
Sbjct: 84  EVFVMNADGTDNRQITHTPYQENEVTWAADGSKLLFLSNDNGSSQLYEMNPDGSGRKQIS 143

Query: 343 Q 343
           +
Sbjct: 144 K 144


>gi|149193986|ref|ZP_01871084.1| translocation protein TolB precursor [Caminibacter mediatlanticus
           TB-2]
 gi|149135939|gb|EDM24417.1| translocation protein TolB precursor [Caminibacter mediatlanticus
           TB-2]
          Length = 383

 Score = 36.6 bits (83), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 94/202 (46%), Gaps = 21/202 (10%)

Query: 217 PRFSPNQQKVAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P+++ N+Q   Y T Y+ + +L  + + T      ++I + + M++      N  + L++
Sbjct: 163 PKWADNKQTTIYFTRYERKPVLYKFNIYTG---KKEKILSSQGMLIVSDVKDN--KLLLT 217

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ--- 332
           +  +   D+Y  DL +    ++TN   I+++  +  D  +I+F SDR G    YV Q   
Sbjct: 218 LAPNGQPDVYLFDLNTKKLTKITNYQGIDVNGKFWGD--KIIFVSDRYGNP--YVFQKDL 273

Query: 333 SNGSDQKRISQDKEA----SYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + G+  + +   K      +Y D  V S +    AF   +   F +     D S +RL +
Sbjct: 274 TTGAVSRVLYHGKNQVGVDTYMDNLVISTRETANAFKPNTFNLFLVNA--NDDSLKRLTM 331

Query: 388 EDSNLQAPTWSPSGRSLIFSRK 409
              N+  P +S  G S++F ++
Sbjct: 332 NGQNM-FPNFSVDGNSIMFIKR 352


>gi|21244823|ref|NP_644405.1| dipeptidyl peptidase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21110525|gb|AAM38941.1| dipeptidyl peptidase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 800

 Score = 36.6 bits (83), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 19/196 (9%)

Query: 262 APRFSSNGKRALISVQKDEAMD--IYSVDLQS---NATERLTNTLFINISAS---YSPDS 313
           A  +S +G+   + ++  +  D  I SVDL +       RL+++ +IN   +   + PD+
Sbjct: 351 AVHWSDDGRNVAVEIRAVDNKDRWIASVDLDNARLQPRHRLSDSAWINWDFNDFGWLPDN 410

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---TKFSGEK 370
             +   S+  G  QLY ++ NG  ++R     E S   PV S  G  + F    K+ G+ 
Sbjct: 411 RTLWLLSEESGYSQLYTVEGNGKPRQRTRGKWEVSM--PVPSADGSGMFFLCNQKWPGD- 467

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           + +  +     Q   +   + ++  + SP+G+ L+  R       ++L  +   G   T+
Sbjct: 468 YEVCKLDLRNDQLTEITALNGVEGYSLSPNGQQLLV-RYSGSYLPTQLAVVPAAGGQATV 526

Query: 431 IN---TPAYASDPQWV 443
           +    TPA+ + P W+
Sbjct: 527 LTDTRTPAFKAQP-WI 541


>gi|166710292|ref|ZP_02241499.1| dipeptidyl peptidase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 789

 Score = 36.6 bits (83), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 27/200 (13%)

Query: 262 APRFSSNGKRALISVQKDEAMD--IYSVDLQS---NATERLTNTLFINISAS---YSPDS 313
           A  +S +G+   + ++  +  D  I SVDL +       RL+++ +IN   +   + PD+
Sbjct: 340 AVHWSDDGRNVAVEIRAVDNKDRWIASVDLDNAKLQPRHRLSDSAWINWDFNDFGWLPDN 399

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---TKFSGEK 370
             +   S+  G  QLY M+ N   ++R     E S   PV S  G  + F    K+ G+ 
Sbjct: 400 RTLWLLSEESGYSQLYTMEGNSKPRQRTRGKWEVSM--PVPSADGSGMFFLCNQKWPGD- 456

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS----KLYSIDLNGR 426
           + +  +     Q   +   + ++  + SP+GR L+ S      +GS    +L  +   G 
Sbjct: 457 YEVCKLDLRNDQLTEVTALNGVEGFSLSPNGRQLLVSY-----SGSYLPTQLAVVPATGG 511

Query: 427 NETLIN---TPAYASDPQWV 443
             T++    TPA+ + P W+
Sbjct: 512 QATVLTDTRTPAFKAQP-WI 530


>gi|119489608|ref|ZP_01622368.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
 gi|119454520|gb|EAW35668.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
          Length = 1795

 Score = 36.6 bits (83), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 35/151 (23%), Positives = 65/151 (43%), Gaps = 18/151 (11%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSPN Q +A ++ D    L     DT+I   P  +     ++ +  FS +G+  + S  +
Sbjct: 1175 FSPNAQMIASSSQDQTVKLWKLGQDTQIAAIPITLRGHGDIVSSVSFSPDGQ-IIASASE 1233

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSP-------DSSQIVFESDREGKEQLYVM 331
            D+ + ++S++ Q          L   I+A YSP           ++  +  +G  +L   
Sbjct: 1234 DKTVKLWSLEGQ----------LLRTITAHYSPLNWVSFSPKGDVIATAGNDGTARLLTP 1283

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +       R S   ++  +   +SP G+LIA
Sbjct: 1284 RGRLLKTLRHSSSDQSKVYTVTFSPDGELIA 1314


>gi|51598187|ref|YP_072378.1| hypothetical protein YPTB3902 [Yersinia pseudotuberculosis IP
           32953]
 gi|170022271|ref|YP_001718776.1| hypothetical protein YPK_0009 [Yersinia pseudotuberculosis YPIII]
 gi|186897410|ref|YP_001874522.1| hypothetical protein YPTS_4119 [Yersinia pseudotuberculosis PB1/+]
 gi|51591469|emb|CAH23140.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|169748805|gb|ACA66323.1| conserved hypothetical protein [Yersinia pseudotuberculosis YPIII]
 gi|186700436|gb|ACC91065.1| conserved hypothetical protein [Yersinia pseudotuberculosis PB1/+]
          Length = 433

 Score = 36.6 bits (83), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 17/112 (15%)

Query: 310 SPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD S I    +D  G  QL+++  NG + ++++  +        WSPQG+ +AF   + 
Sbjct: 320 SPDGSAIACLMNDDNGVVQLWLISPNGGELRQLTASQWGIQSAFSWSPQGEHLAFICDN- 378

Query: 369 EKFAIGVMKKD---GSQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKDG 412
                 VM  D   G   RL     ++ AP      +SP+G+ + F R+ DG
Sbjct: 379 -----SVMLCDSLTGHLRRLTAR--SVVAPLADAVVFSPNGKKIAFMREIDG 423


>gi|159899567|ref|YP_001545814.1| hypothetical protein Haur_3048 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159892606|gb|ABX05686.1| hypothetical protein Haur_3048 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 408

 Score = 36.6 bits (83), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 11/171 (6%)

Query: 278 KDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +D+A +I  +D   N    LTN   ++   I  + +PD   + +        ++ V   +
Sbjct: 41  QDQAGNIQLID-SHNQQLTLTNDASSIVQYIQVTPAPDGQHVAYIQLTPTVIEIRVQAFD 99

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           GS  + +  D     F   WSP   ++AF   SG    + V+  DGS+    V D     
Sbjct: 100 GSPARTVFSDFNLRPFYLSWSPNSQMLAFLA-SGTTMELYVVPADGSEVAHKVRDGQPSY 158

Query: 395 PTWSPSGRSLIFSRKKDGDTG-SKLYSI---DLNGRNETL--INTPAYASD 439
             W P   +L+         G + ++S+   DL    ET      PA+ +D
Sbjct: 159 FAWKPDSSALLLHTGGGTPVGNTAVHSVQSKDLTFFKETAGDFQAPAWNAD 209


>gi|186686820|ref|YP_001870013.1| WD-40 repeat-containing protein [Nostoc punctiforme PCC 73102]
 gi|186469172|gb|ACC84972.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 2172

 Score = 36.6 bits (83), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 22/127 (17%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--SMILAPRFS 266
            S   I+ E RFSP+++ V  A+ D     RV+      D + K+I  F+  S + +  FS
Sbjct: 917  SHQHIVNEARFSPDEKLVITASRDG--TARVW------DLSGKQIVLFKHQSSVNSANFS 968

Query: 267  SNGKRALISVQKDEAMDIYSVD----LQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             +GK+ +I+   D+   ++++     L+   +E   N      SAS+SPD  +IV  SD 
Sbjct: 969  PDGKQ-IITASDDKTARVWNLSGKLLLELKKSETTLN------SASFSPDGKRIVTTSD- 1020

Query: 323  EGKEQLY 329
            +G  +L+
Sbjct: 1021 DGTARLW 1027


>gi|255535191|ref|YP_003095562.1| hypothetical protein FIC_01050 [Flavobacteriaceae bacterium
           3519-10]
 gi|255341387|gb|ACU07500.1| hypothetical protein FIC_01050 [Flavobacteriaceae bacterium
           3519-10]
          Length = 647

 Score = 36.6 bits (83), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S ++ K+ + T ++  + ++YLMDT  ++  +  G    ++    F+++G+    S   
Sbjct: 296 LSEDKSKIVFQT-NESGLHKLYLMDTASNKYSEIKGLAVGLVNNFEFTNDGRSLFFSQST 354

Query: 279 -DEAMDIYSVDLQSNATERLTNT 300
            D + DIY +DL SN  ER T++
Sbjct: 355 YDSSADIYRLDLASNTIERWTDS 377


>gi|218249119|ref|YP_002374490.1| WD-40 repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|218169597|gb|ACK68334.1| WD-40 repeat protein [Cyanothece sp. PCC 8801]
          Length = 1161

 Score = 36.6 bits (83), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 50/245 (20%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSPN Q +A A+ D    +R++    R  R    I   +  I    FS +G+  + S  +
Sbjct: 568 FSPNGQLIATASSDG--TIRLW---DRQGRQKTVITGHKGNIYRVTFSPDGQ-LIASASQ 621

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D    ++++  Q   T +  N+     S S+SPDS  ++  S R+   +++ +Q +   Q
Sbjct: 622 DNTAKVWNLQGQELMTLKGHNSSVY--SVSFSPDSKHLLTTS-RDDTARIWDLQGH---Q 675

Query: 339 KRISQDKEAS----YFDP---------------VWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             I +  E S     F P               +W  QG+L+   K S + F       D
Sbjct: 676 LAILKGHEKSIDHGVFSPDGQRIATASRDGTVRIWDNQGNLLKILKDSVDSFYSVSFSPD 735

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           G  +RL     +     W   G+S+                + L G  E L+    Y+ D
Sbjct: 736 G--QRLASSAKDGTVRIWDNQGKSI----------------LTLKGHQE-LVKNVTYSHD 776

Query: 440 PQWVG 444
             W+ 
Sbjct: 777 GNWIA 781


>gi|257062205|ref|YP_003140093.1| hypothetical protein Cyan8802_4475 [Cyanothece sp. PCC 8802]
 gi|256592371|gb|ACV03258.1| WD-40 repeat protein [Cyanothece sp. PCC 8802]
          Length = 1161

 Score = 36.6 bits (83), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 50/245 (20%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSPN Q +A A+ D    +R++    R  R    I   +  I    FS +G+  + S  +
Sbjct: 568 FSPNGQLIATASSDG--TIRLW---DRQGRQKTVITGHKGNIYRVTFSPDGQ-LIASASQ 621

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D    ++++  Q   T +  N+     S S+SPDS  ++  S R+   +++ +Q +   Q
Sbjct: 622 DNTAKVWNLQGQELMTLKGHNSSVY--SVSFSPDSKHLLTTS-RDDTARIWDLQGH---Q 675

Query: 339 KRISQDKEAS----YFDP---------------VWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             I +  E S     F P               +W  QG+L+   K S + F       D
Sbjct: 676 LAILKGHEKSIDHGVFSPDGQRIATASRDGTVRIWDNQGNLLKILKDSVDSFYSVSFSPD 735

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           G  +RL     +     W   G+S+                + L G  E L+    Y+ D
Sbjct: 736 G--QRLASSAKDGTVRIWDNQGKSI----------------LTLKGHQE-LVKNVTYSHD 776

Query: 440 PQWVG 444
             W+ 
Sbjct: 777 GNWIA 781


>gi|115452667|ref|NP_001049934.1| Os03g0314500 [Oryza sativa Japonica Group]
 gi|108707813|gb|ABF95608.1| WD40-like Beta Propeller Repeat family protein, expressed [Oryza
           sativa Japonica Group]
 gi|113548405|dbj|BAF11848.1| Os03g0314500 [Oryza sativa Japonica Group]
 gi|125586045|gb|EAZ26709.1| hypothetical protein OsJ_10615 [Oryza sativa Japonica Group]
          Length = 730

 Score = 36.6 bits (83), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 27/169 (15%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-- 274
           P FS +  ++A+    D +   V+L D++  R   +     S + +P +  N K+ ++  
Sbjct: 397 PTFSKDGSQLAFV---DNEFKSVWLADSQGMRVVFKTDGPDS-VFSPLW--NSKKDILYV 450

Query: 275 ----SVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYSPDSSQIVFESDREG--- 324
               S +  E ++I+S+   S     + +LT   F N   S +PD ++ VF S R+G   
Sbjct: 451 CMGPSFKASETLEIHSIHNVSTGDRKSRQLTFGGFNNAFPSTNPDGTKFVFRSTRDGGAK 510

Query: 325 -KEQLYVMQ----SNGSD--QKRISQDKEASYFDPV--WSPQGDLIAFT 364
             + LY+M+      G D  Q  +++     + D    WSP G  I F+
Sbjct: 511 YSKNLYIMEDADAGEGEDGSQSTVTRMTAGEWTDTHCQWSPNGKWIVFS 559


>gi|94967294|ref|YP_589342.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549344|gb|ABF39268.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 894

 Score = 36.6 bits (83), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 20/180 (11%)

Query: 244 TRIDRAPKRIGN------FRSMILAPRFSSNGKRALISVQK----DEAMDIYSVDLQSNA 293
           T  DR+ K +G+      F ++ L+P    NG+   ++V K     +  D++ +DL   A
Sbjct: 609 TWFDRSGKSLGDVADPDYFGALSLSP----NGQS--LAVDKVDSGSQNTDVWLLDLHGGA 662

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             R+T    I+    +SP +S+I F ++RE    +Y    +G   + +  +     +   
Sbjct: 663 PRRITFDPSIDALPVWSPAASEIAFVTNRELHFSVYRKSVDGHATESVLINDLPDNYPND 722

Query: 354 WSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           WS  G    +   +G  +     M K   +E L    S L+   +SP G+ + ++  + G
Sbjct: 723 WSRDGKYFLYVHGTGLWYLTFSDMTK---KEFLNAGTSALKTGHFSPDGKWIAYASNESG 779


>gi|125543618|gb|EAY89757.1| hypothetical protein OsI_11300 [Oryza sativa Indica Group]
          Length = 737

 Score = 36.6 bits (83), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 27/169 (15%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-- 274
           P FS +  ++A+    D +   V+L D++  R   +     S + +P +  N K+ ++  
Sbjct: 404 PTFSKDGSQLAFV---DNEFKSVWLADSQGMRVVFKTDGPDS-VFSPLW--NSKKDILYV 457

Query: 275 ----SVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYSPDSSQIVFESDREG--- 324
               S +  E ++I+S+   S     + +LT   F N   S +PD ++ VF S R+G   
Sbjct: 458 CMGPSFKASETLEIHSIHNVSTGDRKSRQLTFGGFNNAFPSTNPDGTKFVFRSTRDGGAK 517

Query: 325 -KEQLYVMQ----SNGSD--QKRISQDKEASYFDPV--WSPQGDLIAFT 364
             + LY+M+      G D  Q  +++     + D    WSP G  I F+
Sbjct: 518 YSKNLYIMEDADAGEGEDGSQSTVTRMTAGEWTDTHCQWSPNGKWIVFS 566


>gi|254515665|ref|ZP_05127725.1| hypothetical protein NOR53_3058 [gamma proteobacterium NOR5-3]
 gi|219675387|gb|EED31753.1| hypothetical protein NOR53_3058 [gamma proteobacterium NOR5-3]
          Length = 817

 Score = 36.6 bits (83), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 37/192 (19%), Positives = 74/192 (38%), Gaps = 5/192 (2%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PR+SP+ + +A+   D +D   + L    +D     + N   + L P FS++G+    S 
Sbjct: 99  PRWSPDNKHLAFVRDDGQDTAVLVL---EVDSGKIAVINSPGIELDPEFSADGEYLYYSS 155

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
               ++ I+   L S A ++LT+   +  +    P    I++         L +      
Sbjct: 156 GASGSLSIWRYHLASGAEQQLTDLPHVERNIRRLPGRDSILYLHGSRAYRSLRLRDFVSG 215

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-- 394
           +   + Q+    +      P   L  ++      + +  +  D  + R  + D    A  
Sbjct: 216 EDSVVHQETLTYHLTSDAHPTQRLAVYSAPINGDYHLWTIDLDDPRARHRLTDGTRYALT 275

Query: 395 PTWSPSGRSLIF 406
           P +S  G S+ F
Sbjct: 276 PAFSADGNSIYF 287


>gi|116754145|ref|YP_843263.1| periplasmic component of the Tol biopolymer transport system-like
           [Methanosaeta thermophila PT]
 gi|116665596|gb|ABK14623.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Methanosaeta thermophila PT]
          Length = 1202

 Score = 36.6 bits (83), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 37/173 (21%), Positives = 74/173 (42%), Gaps = 11/173 (6%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP-DSSQIVFESDREGKEQ 327
           G   + +  ++  +D++  DL++    +L+   F      Y   D   +V+  +R G +Q
Sbjct: 376 GDYVIYTDMRNGNLDVFLYDLRAGNERQLSKDPF---DQRYPMIDGRYVVWMDNRTGSDQ 432

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +YV       +++I+  ++A    PV S  GD I +      K+ I +      +E  + 
Sbjct: 433 IYVYDVLQGSERQITTQQQAQLLSPVIS--GDRIVWADRRSGKWDIYMYNLTTGKETPIC 490

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGS----KLYSIDLNGRNETLINTPAY 436
            +   Q   W   G +++++  ++    S     +YS +L    ET I T  Y
Sbjct: 491 TNPANQVQPWI-HGNTIVWADGRNALNASIRNWDIYSYNLTTGKETPICTNGY 542


>gi|284166447|ref|YP_003404726.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haloterrigena turkmenica DSM 5511]
 gi|284016102|gb|ADB62053.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haloterrigena turkmenica DSM 5511]
          Length = 612

 Score = 36.6 bits (83), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 8/124 (6%)

Query: 307 ASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           AS+SP+  +++F  D  G E  QL+ + +   + + ++   EA +    WS  G+  AF 
Sbjct: 62  ASWSPERPELIFGMDEGGNERAQLFTLDAETGEIENVTAMPEAKHRWGGWSHDGERFAFA 121

Query: 365 KFSGEK--FAIGVMKKD--GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
               ++  F I V  +D  G    L+ E D  L    WSP    L+ S+    +    LY
Sbjct: 122 SNRRDESVFDIYVQDRDETGDDADLVYEGDGWLSLSGWSPDDSRLLVSQAY-SNFDQDLY 180

Query: 420 SIDL 423
            +DL
Sbjct: 181 VLDL 184


>gi|221635973|ref|YP_002523849.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Thermomicrobium roseum DSM 5159]
 gi|221157355|gb|ACM06473.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Thermomicrobium roseum DSM 5159]
          Length = 667

 Score = 36.6 bits (83), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 22/142 (15%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASY----SPDSSQIVF------ESDREGKEQLYVM 331
           +D   V +  NAT  LT    + +   +    +PD   IV+        +   +  L+++
Sbjct: 3   LDSEEVKVSENATTILTVDELVTMQRPFDVEVAPDGETIVYVVRPVSREEEHWRSSLWIV 62

Query: 332 QSNGSDQKRIS----QDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQE-R 384
                + ++ +     D+E     P WSP G  IAF     E  K ++ ++ ++G +  R
Sbjct: 63  PFMEGEARQFTSGLWHDRE-----PRWSPDGGWIAFLSDRAERGKTSVYLIPRNGGEALR 117

Query: 385 LLVEDSNLQAPTWSPSGRSLIF 406
           +  +   +   +WSP GR L F
Sbjct: 118 VFDQAGEIDNLSWSPDGRFLAF 139


>gi|166365544|ref|YP_001657817.1| hypothetical protein MAE_28030 [Microcystis aeruginosa NIES-843]
 gi|166087917|dbj|BAG02625.1| hypothetical protein MAE_28030 [Microcystis aeruginosa NIES-843]
          Length = 173

 Score = 36.6 bits (83), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 16/128 (12%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRI------SQDKEASYFDPVWSPQGDLIAFTKF 366
           S  +VF SDR G + +Y+   +  D++ +      S D+ AS   P  S  G  I FT  
Sbjct: 51  SRYLVFASDRNGSQAIYLF--DAIDRRLLPLPGLNSLDQIAS--SPSISEDGRYIVFTAS 106

Query: 367 SGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              K AI +  +   Q R +  D  + ++ P  S  G  + F   K+G     +Y  DL+
Sbjct: 107 RQGKTAIYLYDRQTQQRREIAPDLLAEVRNPIISADGSKVAFEAAKNGQWDIMIY--DLS 164

Query: 425 GRNETLIN 432
           GR   L+N
Sbjct: 165 GR--VLVN 170


>gi|159898283|ref|YP_001544530.1| hypothetical protein Haur_1759 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159891322|gb|ABX04402.1| conserved hypothetical protein [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 463

 Score = 36.6 bits (83), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 19/129 (14%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  SP+ ++I +  +R     L+V   +G +++ ++Q+   +   P WSP    +A    
Sbjct: 154 ARVSPNGTKIAYLDNRT----LFVADRDGENRQALTQNVNEA---PRWSPDSTALAVVSG 206

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQA---------PTWSPSGRSLIFSRKKDGDTGSK 417
           S +         D    +L+V D N  +         P WSP G+ L +     GD    
Sbjct: 207 SPDNRYPLACAND---SQLIVVDLNSNSSTTLAQGCQPAWSPDGKRLAYVSPTIGDINEG 263

Query: 418 LYSIDLNGR 426
             ++ L GR
Sbjct: 264 FNTVGLIGR 272


>gi|170728810|ref|YP_001762836.1| peptidase S9 prolyl oligopeptidase [Shewanella woodyi ATCC 51908]
 gi|169814157|gb|ACA88741.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella woodyi ATCC 51908]
          Length = 681

 Score = 36.6 bits (83), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 3/75 (4%)

Query: 373 IGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY--SIDLNGRNET 429
           + +  KDGS +R L  +   +  P +SP  + L F  K+D D   ++Y   +D  G  + 
Sbjct: 73  LWLFAKDGSSQRPLTAKGLRVSEPVFSPDSKVLAFVSKRDEDEDGQIYLLPMDRAGEAQR 132

Query: 430 LINTPAYASDPQWVG 444
           L + P      +WVG
Sbjct: 133 LTDVPGGVKGVKWVG 147


>gi|260946625|ref|XP_002617610.1| hypothetical protein CLUG_03054 [Clavispora lusitaniae ATCC 42720]
 gi|238849464|gb|EEQ38928.1| hypothetical protein CLUG_03054 [Clavispora lusitaniae ATCC 42720]
          Length = 802

 Score = 36.6 bits (83), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 22/101 (21%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            + +D++S A E L+    ++ +A ++P S +I F  D +    +Y+   + +  +RI++
Sbjct: 178 FWVLDVESQAIEPLSGKDLVS-TALWAPTSDKIAFVLDND----VYIRHLHAAKVERITK 232

Query: 344 DKEASYFDP-----------------VWSPQGDLIAFTKFS 367
           D   + F+                   WSPQGD +AF +F+
Sbjct: 233 DGSVNIFNGKPDWVYEEEVFAADIAMWWSPQGDKVAFLRFN 273


>gi|269928695|ref|YP_003321016.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269788052|gb|ACZ40194.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 647

 Score = 36.6 bits (83), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 16/107 (14%)

Query: 310 SPDSSQIVFESDREGKEQ------LYVMQSNGSDQKRISQDKEASYFD---PVWSPQGDL 360
           SPD  +I F      KE+      ++V+   G + ++ +    A  +D   P WSP G  
Sbjct: 31  SPDGERIAFTLRPVSKEKEHPESAIWVVSFAGGEPRQFT----AGQWDDEEPRWSPDGRR 86

Query: 361 IAFTKFSGE--KFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSL 404
           +AF     E  K ++ +M  DG +  R+  +  +++  +WSP GR L
Sbjct: 87  LAFLSDRAERGKKSVYIMPADGGEARRVFDQQGDMEQLSWSPDGRFL 133


>gi|329928644|ref|ZP_08282498.1| WD40-like protein [Paenibacillus sp. HGF5]
 gi|328937607|gb|EGG34022.1| WD40-like protein [Paenibacillus sp. HGF5]
          Length = 240

 Score = 36.2 bits (82), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 28/66 (42%), Gaps = 6/66 (9%)

Query: 351 DPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           DPV SP    IA+       K  G +  I ++   G Q+          AP WSP G  L
Sbjct: 20  DPVVSPASGAIAYVHKSVSEKHDGYRSHIRLLPAGGDQDIPFTSGEADAAPAWSPDGSEL 79

Query: 405 IFSRKK 410
            F RKK
Sbjct: 80  AFLRKK 85


>gi|94968180|ref|YP_590228.1| peptidase S9, prolyl oligopeptidase active site region [Candidatus
           Koribacter versatilis Ellin345]
 gi|94550230|gb|ABF40154.1| peptidase S9, prolyl oligopeptidase active site region [Candidatus
           Koribacter versatilis Ellin345]
          Length = 750

 Score = 36.2 bits (82), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 5/101 (4%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD     + +    K  + +   +G  Q +   +      +P WSP G  +AF     +
Sbjct: 207 SPDGKWAAWAN----KTGILLAPIDGKQQAKKLNELRGELSEPRWSPDGKRLAFVVNRTD 262

Query: 370 KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRK 409
              IG+ +  G++ R L   +N    P WS  G+ + F R+
Sbjct: 263 HSFIGLQEIGGTEVRYLAPSTNRDDLPRWSADGKQIAFVRQ 303


Searching..................................................done


Results from round 2




>gi|254780548|ref|YP_003064961.1| translocation protein TolB [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040225|gb|ACT57021.1| translocation protein TolB [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 447

 Score =  582 bits (1500), Expect = e-164,   Method: Composition-based stats.
 Identities = 447/447 (100%), Positives = 447/447 (100%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE
Sbjct: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG
Sbjct: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
           KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV
Sbjct: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY
Sbjct: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT
Sbjct: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL
Sbjct: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS
Sbjct: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDLNGRNETLINTPAYASDPQWVGFMD
Sbjct: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447


>gi|15966492|ref|NP_386845.1| translocation protein TolB [Sinorhizobium meliloti 1021]
 gi|32699712|sp|Q926C2|TOLB_RHIME RecName: Full=Protein tolB; Flags: Precursor
 gi|15075763|emb|CAC47318.1| Probable TolB protein precursor [Sinorhizobium meliloti 1021]
          Length = 436

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 215/447 (48%), Positives = 299/447 (66%), Gaps = 13/447 (2%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M  R F          L ++LV   G   +  +A V++  N  N  P+ IA T F+   E
Sbjct: 3   MLRRNFFR--------LLMVLVAGCGLIASPANALVEININKGNVEPLPIAITDFL-QGE 53

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           L  K+S V++ DL+RS +F  I + +F +KI+NPD+ PRF+DW  + AQ LV GRV +EG
Sbjct: 54  LAQKISGVIAADLKRSGLFAPIDKGAFIEKISNPDATPRFEDWKVINAQALVIGRVTQEG 113

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
             RL+ EFRLWD    +Q++G++F++ P +WR++AH I+D IY+ ITGEKG F++RI++V
Sbjct: 114 DGRLKAEFRLWDTFAGQQMLGQQFYTQPENWRRVAHIIADAIYERITGEKGYFDTRIVYV 173

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +ES      K  L +MD+DGAN R LT S D I+  PRFSPN+Q++ Y +++++   RVY
Sbjct: 174 AESGPKNARKRQLAIMDQDGANSRALTNSND-IVLTPRFSPNRQEITYMSFENQQP-RVY 231

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L+     +  + +GNF  M  APRFS +G+R ++S+Q++   +IY++DL+S  T RLTNT
Sbjct: 232 LLQLETGQ-REVVGNFPGMTFAPRFSPDGQRVIMSLQQEGNANIYTMDLRSRTTTRLTNT 290

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+ S SYSPD S+IVFESDR GK+QLYVM ++GS Q RIS   + SY  PVWSP+GDL
Sbjct: 291 AAIDTSPSYSPDGSRIVFESDRGGKQQLYVMGADGSGQTRISF-GDGSYSTPVWSPRGDL 349

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTK SG KF+IGVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYS
Sbjct: 350 IAFTKQSGGKFSIGVMKPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQNAGAGGPQLYS 409

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDL G NE L+ T  +ASDP W   M+
Sbjct: 410 IDLTGYNEQLVQTQGFASDPAWSPLME 436


>gi|307300471|ref|ZP_07580251.1| Tol-Pal system beta propeller repeat protein TolB [Sinorhizobium
           meliloti BL225C]
 gi|307318336|ref|ZP_07597771.1| Tol-Pal system beta propeller repeat protein TolB [Sinorhizobium
           meliloti AK83]
 gi|306896018|gb|EFN26769.1| Tol-Pal system beta propeller repeat protein TolB [Sinorhizobium
           meliloti AK83]
 gi|306904637|gb|EFN35221.1| Tol-Pal system beta propeller repeat protein TolB [Sinorhizobium
           meliloti BL225C]
          Length = 434

 Score =  508 bits (1308), Expect = e-142,   Method: Composition-based stats.
 Identities = 215/447 (48%), Positives = 299/447 (66%), Gaps = 13/447 (2%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M  R F          L ++LV   G   +  +A V++  N  N  P+ IA T F+   E
Sbjct: 1   MLRRNFFR--------LLMVLVAGCGLIASPANALVEININKGNVEPLPIAITDFL-QGE 51

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           L  K+S V++ DL+RS +F  I + +F +KI+NPD+ PRF+DW  + AQ LV GRV +EG
Sbjct: 52  LAQKISGVIAADLKRSGLFAPIDKGAFIEKISNPDATPRFEDWKVINAQALVIGRVTQEG 111

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
             RL+ EFRLWD    +Q++G++F++ P +WR++AH I+D IY+ ITGEKG F++RI++V
Sbjct: 112 DGRLKAEFRLWDTFAGQQMLGQQFYTQPENWRRVAHIIADAIYERITGEKGYFDTRIVYV 171

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +ES      K  L +MD+DGAN R LT S D I+  PRFSPN+Q++ Y +++++   RVY
Sbjct: 172 AESGPKNARKRQLAIMDQDGANSRALTNSND-IVLTPRFSPNRQEITYMSFENQQP-RVY 229

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L+     +  + +GNF  M  APRFS +G+R ++S+Q++   +IY++DL+S  T RLTNT
Sbjct: 230 LLQLETGQ-REVVGNFPGMTFAPRFSPDGQRVIMSLQQEGNANIYTMDLRSRTTTRLTNT 288

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+ S SYSPD S+IVFESDR GK+QLYVM ++GS Q RIS   + SY  PVWSP+GDL
Sbjct: 289 AAIDTSPSYSPDGSRIVFESDRGGKQQLYVMGADGSGQTRISF-GDGSYSTPVWSPRGDL 347

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTK SG KF+IGVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYS
Sbjct: 348 IAFTKQSGGKFSIGVMKPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQNAGAGGPQLYS 407

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDL G NE L+ T  +ASDP W   M+
Sbjct: 408 IDLTGYNEQLVQTQGFASDPAWSPLME 434


>gi|150397825|ref|YP_001328292.1| translocation protein TolB [Sinorhizobium medicae WSM419]
 gi|166229991|sp|A6UCS7|TOLB_SINMW RecName: Full=Protein tolB; Flags: Precursor
 gi|150029340|gb|ABR61457.1| Tol-Pal system beta propeller repeat TolB [Sinorhizobium medicae
           WSM419]
          Length = 436

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 213/447 (47%), Positives = 299/447 (66%), Gaps = 13/447 (2%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M  R F          L ++LV   G   +   A V++  N  N  P+ IA T FV   E
Sbjct: 3   MLRRNFFR--------LLMVLVAGCGLIASPAKALVEIDINKGNVEPLPIAITDFV-QGE 53

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           L  K+S+V++ DL+RS +F  I++ +F +K++NPD+ PRF+DW  + AQ LV GRV KEG
Sbjct: 54  LAQKISDVIAADLKRSGLFAPINKGAFIEKVSNPDATPRFEDWKVINAQALVIGRVTKEG 113

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
             RL+ EFRLWD     Q++G++F++ P +WR++AH I+D IY+ ITGEKG F++RI++V
Sbjct: 114 DGRLKAEFRLWDTFAGTQMLGQQFYTQPENWRRVAHIIADAIYERITGEKGYFDTRIVYV 173

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +ES      +  L +MD+DGAN R LT S D I+  PRFSPN+Q++ Y +++++   RVY
Sbjct: 174 AESGPKNARQRQLAIMDQDGANSRALTNSND-IVLTPRFSPNRQEITYMSFENQQP-RVY 231

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L+     +  + +GNF  M  APRFS +G+R ++S+Q++   +IY++DL+S  T RLTNT
Sbjct: 232 LLQLETGQ-REVVGNFPGMTFAPRFSPDGQRVIMSLQQEGNANIYTMDLRSRTTTRLTNT 290

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+ S SYSPD S++VFESDR G++QLYVM ++GS Q RIS   + SY  PVWSP+GDL
Sbjct: 291 AAIDTSPSYSPDGSRVVFESDRGGRQQLYVMGADGSGQTRISF-GDGSYSTPVWSPRGDL 349

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTK SG KF+IGVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYS
Sbjct: 350 IAFTKQSGGKFSIGVMKPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQNAGAGGPQLYS 409

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDL G NE L+ T  +ASDP W   M+
Sbjct: 410 IDLTGYNEQLVPTQGFASDPAWSPLME 436


>gi|332716443|ref|YP_004443909.1| protein tolB precursor [Agrobacterium sp. H13-3]
 gi|325063128|gb|ADY66818.1| protein tolB precursor [Agrobacterium sp. H13-3]
          Length = 443

 Score =  506 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 209/433 (48%), Positives = 292/433 (67%), Gaps = 4/433 (0%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           I L L +  +   F     A V++  N  N  P+ IA T F+S D +G +VS V++ DLQ
Sbjct: 15  IRLVLAVAALMSVFSAPAFARVEININKGNVEPLPIAITDFISGDGIGAQVSAVIAADLQ 74

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           RS +F  +++ +F +KI NPD  PRF+DW  + AQ LVTGRV +E   RLR EFRLWD  
Sbjct: 75  RSGLFAPVNKSAFIEKIANPDQQPRFEDWKVINAQALVTGRVTRESDGRLRAEFRLWDTF 134

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             +Q+ G++FF+ P +WR++AH I+D IY+ +TGEKG F++R++FVSES      K  L 
Sbjct: 135 AGQQMTGQQFFTQPENWRRVAHIIADAIYERVTGEKGYFDTRVVFVSESGPKTARKRQLS 194

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD+DG N+R LT S D I+  PRFSPN+Q+V Y +++     RVYL+     +  + +G
Sbjct: 195 IMDQDGFNVRNLTNSND-IVLTPRFSPNRQEVTYMSFE-GQQPRVYLLQLETGQ-REVVG 251

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           NF  M  +PRFS +G++ ++S+Q+D   +IY++DL+S  T RLTNT  I+ + S+SPD  
Sbjct: 252 NFPGMTFSPRFSPDGQKVIMSLQQDGNANIYTMDLRSRTTTRLTNTSAIDTAPSFSPDGQ 311

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++ FESDR G++Q+YVM ++GS Q+RIS   + SY  PVWSP+GDLIAFTK SG KF+IG
Sbjct: 312 RVAFESDRGGRQQIYVMNADGSGQQRISF-GDGSYSTPVWSPRGDLIAFTKQSGGKFSIG 370

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           VMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE LI TP
Sbjct: 371 VMKTDGSGERILTSGFHNEGPTWAPNGRVLMFFRQNAGAGGPQLYSIDLTGYNEQLIKTP 430

Query: 435 AYASDPQWVGFMD 447
            +ASDP W   +D
Sbjct: 431 TFASDPAWSPLLD 443


>gi|163758790|ref|ZP_02165877.1| translocation protein TolB precursor [Hoeflea phototrophica DFL-43]
 gi|162284080|gb|EDQ34364.1| translocation protein TolB precursor [Hoeflea phototrophica DFL-43]
          Length = 450

 Score =  506 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 208/448 (46%), Positives = 307/448 (68%), Gaps = 5/448 (1%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTS-IHAFVKVATNSANYSPVSIAFTKFVSID 59
           M+L+      +N  +     +V    F  +S   A V++  N AN  P+ IA T F+S D
Sbjct: 7   MALKGCTMNLMNRLVLFPFAIVAALAFLASSPARAVVEIDINRANVEPLPIAITDFLSDD 66

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
            +G ++S VV+ DL+RS +F  I++ +F ++I+NPD+ PRF+DW  + AQ LV GRV++E
Sbjct: 67  AIGAQISAVVAADLKRSGLFAPIAKGAFIERISNPDASPRFEDWRVINAQALVVGRVVRE 126

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
              RLR EFRLWD    +Q+ G++FF+SP +WR++AH I+D IY+ +TGEKG F+SR++F
Sbjct: 127 SDGRLRAEFRLWDTFASQQLTGEQFFTSPENWRRVAHIIADAIYERLTGEKGYFDSRVVF 186

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           VSES      +  L +MD+DGAN+R LT +   I+  PRFSP++Q++ Y +++     RV
Sbjct: 187 VSESGPKTDRQKQLAIMDQDGANVRMLTDASS-IVLTPRFSPSRQEITYMSFEGGQP-RV 244

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           YL+     +  + +GNF  M  +PRFS +G++ ++S+Q+D   +IY++DL+S AT RLT+
Sbjct: 245 YLLQLETGQ-RELVGNFPGMTFSPRFSPDGQKVIMSLQQDGNANIYTMDLRSRATTRLTS 303

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T  I+ S SYSPD +QIVFESDR G++QLY+M ++GS+Q+R+S   + SY  PVWSP+GD
Sbjct: 304 TAAIDTSPSYSPDGTQIVFESDRGGRQQLYIMNADGSNQRRVSF-GDGSYSTPVWSPRGD 362

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           LIAFTK SG KF+IGVM+ DGS ER+L    + + PTW+P+GR L+F R+  G  G ++Y
Sbjct: 363 LIAFTKQSGGKFSIGVMRTDGSGERILTTGFHNEGPTWAPNGRVLMFFRQPAGAGGPQIY 422

Query: 420 SIDLNGRNETLINTPAYASDPQWVGFMD 447
           SIDL G NE L++TP +ASDP W   ++
Sbjct: 423 SIDLTGYNEQLVSTPTFASDPAWSPLLE 450


>gi|159185873|ref|NP_356906.2| translocation protein TolB [Agrobacterium tumefaciens str. C58]
 gi|32699707|sp|Q8U9L4|TOLB_AGRT5 RecName: Full=Protein tolB; Flags: Precursor
 gi|159141007|gb|AAK89691.2| tolB protein [Agrobacterium tumefaciens str. C58]
          Length = 435

 Score =  505 bits (1300), Expect = e-141,   Method: Composition-based stats.
 Identities = 209/433 (48%), Positives = 294/433 (67%), Gaps = 4/433 (0%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           I L L +  +   F     A V++  N  N  P+ IA T F+S D +G +VS V++ DLQ
Sbjct: 7   IRLVLAIAALMSVFSAPAFARVEININKGNVEPLPIAITDFMSSDGIGAQVSAVIAADLQ 66

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           RS +F  +++++F +KI+NPD  PRF+DW  + AQ LVTGRV +E   RLR EFRLWD  
Sbjct: 67  RSGLFAPVNKNAFIEKISNPDQQPRFEDWKVINAQALVTGRVTRESDGRLRAEFRLWDTF 126

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             +Q+ G++FF+ P +WR++AH I+D IY+ +TGEKG F++R++FVSES      K  L 
Sbjct: 127 AGQQLSGQQFFTQPENWRRVAHIIADAIYERVTGEKGYFDTRVVFVSESGPKTARKRQLS 186

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD+DG N+R LT S D I+  PRFSPN+Q+V Y +++     RVYL+     +  + +G
Sbjct: 187 IMDQDGFNVRNLTNSND-IVLTPRFSPNRQEVTYMSFE-GQQPRVYLLQLETGQ-REVVG 243

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           NF  M  +PRFS +G++ ++S+Q+D   +IY++DL+S  T RLTNT  I+ + SYSPD  
Sbjct: 244 NFPGMTFSPRFSPDGQKVIMSLQQDGNANIYTMDLRSRTTTRLTNTAAIDTAPSYSPDGQ 303

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++ FESDR G++Q+YVM ++GS Q+R+S   + SY  PVWSP+GDLIAFTK SG KF+IG
Sbjct: 304 RVAFESDRGGRQQIYVMNADGSGQQRVSF-GDGSYSTPVWSPRGDLIAFTKQSGGKFSIG 362

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           VMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE LI TP
Sbjct: 363 VMKTDGSGERILTSGFHNEGPTWAPNGRVLMFFRQNAGAGGPQLYSIDLTGYNEQLIKTP 422

Query: 435 AYASDPQWVGFMD 447
            +ASDP W   +D
Sbjct: 423 TFASDPAWSPLLD 435


>gi|239832783|ref|ZP_04681112.1| Tol-Pal system beta propeller repeat protein TolB [Ochrobactrum
           intermedium LMG 3301]
 gi|239825050|gb|EEQ96618.1| Tol-Pal system beta propeller repeat protein TolB [Ochrobactrum
           intermedium LMG 3301]
          Length = 475

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 202/442 (45%), Positives = 294/442 (66%), Gaps = 5/442 (1%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           I  ++    +    ++           A V++  N     P+ IA T F+S D+LG  ++
Sbjct: 38  INTKIRTVFSAFACMIAASLVCTMPARAVVEININKGVIEPLPIAITDFLSADQLGPNIT 97

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            V++ DL+RS +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+   RL+ 
Sbjct: 98  SVIAADLERSGLFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPDGRLKA 157

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           EFRLWD    +Q+IG++FF++P +WR++AH I+D IY+ +TGEKG F++R++FV ES  +
Sbjct: 158 EFRLWDTFGGQQMIGQQFFTTPDNWRRVAHIIADAIYERLTGEKGYFDTRVVFVDESGPA 217

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L +MD+DGAN+RY++  R  I   PRFSPN+Q+V Y +Y+     +VYL+    
Sbjct: 218 QKRVKRLAIMDQDGANVRYISDGR-AISLTPRFSPNRQEVTYMSYE-GGTPKVYLLQLET 275

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +  + +GNF  M +APRFS +G++ ++S +Q D + +IY++DL++ +T RLTN+  I+ 
Sbjct: 276 GQ-RELVGNFPGMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRSTTRLTNSQAIDT 334

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            ASYSPD SQIVF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDLIAFTK
Sbjct: 335 GASYSPDGSQIVFTSDRGGRPQLYVMGADGSNPRRISM-GDGSYSTPVWSPRGDLIAFTK 393

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            S  +F+IGVMK DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++IDL G
Sbjct: 394 QSQGQFSIGVMKTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFTIDLTG 453

Query: 426 RNETLINTPAYASDPQWVGFMD 447
           RNE  I TP +ASDP W   ++
Sbjct: 454 RNERQIQTPNFASDPAWSPLLE 475


>gi|227823308|ref|YP_002827280.1| translocation protein TolB [Sinorhizobium fredii NGR234]
 gi|227342309|gb|ACP26527.1| TolB protein precursor [Sinorhizobium fredii NGR234]
          Length = 457

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 214/440 (48%), Positives = 295/440 (67%), Gaps = 5/440 (1%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
            E L         LV  G  F    +A V++  N  N  P+ +A T F+   ELG K+S+
Sbjct: 23  MEMLRRNFFRLFTLVFAGVLFAAPANAVVEININKGNVEPLPVAITDFL-QGELGQKISD 81

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           VV+ DL+RS +F  I + +F +KI NPD+ PRF+DW  + AQ LVTGRV +EG  RL+ E
Sbjct: 82  VVAADLKRSGLFAPIDKGAFIEKIANPDAAPRFEDWKVINAQALVTGRVTQEGDGRLKAE 141

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           FRLWD    +Q++G++F++ P +WR++AH I+D IY+ ITGEKG F++RI++V+ES    
Sbjct: 142 FRLWDTFAGQQMLGQQFYTQPENWRRVAHIIADAIYERITGEKGYFDTRIVYVAESGPKN 201

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  L +MD+DG N R LT S D I+  PRFSPN+Q++ Y +++++   RVYL+     
Sbjct: 202 ARKRQLAIMDQDGFNARALTNSND-IVLTPRFSPNRQEITYMSFENQQP-RVYLLQLETG 259

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  + +GNF  M  APRFS +G+R ++S+Q++   +IY++DL+S  T RLTNT  I+ S 
Sbjct: 260 Q-REVVGNFPGMTFAPRFSPDGQRVIMSLQQEGNANIYTMDLRSRTTTRLTNTNAIDTSP 318

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SYSPD ++IVFESDR GK+QLYVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK S
Sbjct: 319 SYSPDGARIVFESDRGGKQQLYVMGADGSGQTRISF-GDGSYSTPVWSPRGDLIAFTKQS 377

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G KF+IGVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G N
Sbjct: 378 GGKFSIGVMKPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQNAGAGGPQLYSIDLTGYN 437

Query: 428 ETLINTPAYASDPQWVGFMD 447
           E  I T  +ASDP W   M+
Sbjct: 438 EQQIQTQGFASDPAWSPLME 457


>gi|315122876|ref|YP_004063365.1| translocation protein TolB [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313496278|gb|ADR52877.1| translocation protein TolB [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 435

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 315/435 (72%), Positives = 369/435 (84%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M + + LLLVL+ GFF   + A VKV  N+++YSPVSIA T FVS+DELGGK SEV+SK+
Sbjct: 1   MNVKIFLLLVLVSGFFSVPVQALVKVNVNNSDYSPVSIAVTDFVSLDELGGKFSEVISKN 60

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           LQ+SDVF  I Q SFKQKITNPD  PRF DW SLGAQVLV GRVIKEGKDRLRVEFRLWD
Sbjct: 61  LQKSDVFTQIPQGSFKQKITNPDITPRFHDWQSLGAQVLVMGRVIKEGKDRLRVEFRLWD 120

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           +KDRKQI+GKKFF+SP  WR++AH ISD+IYQ+ITGEK  FN+R+LFVSES+VSG+IKN 
Sbjct: 121 IKDRKQILGKKFFASPVDWRRLAHIISDEIYQNITGEKSYFNTRLLFVSESIVSGVIKNR 180

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           LC+MD+DG N+RYLTP+ D+ILF P+F P QQKVAYA+YDDEDIL+VYLMD RIDRAPKR
Sbjct: 181 LCLMDQDGFNVRYLTPNSDRILFTPQFYPKQQKVAYASYDDEDILKVYLMDIRIDRAPKR 240

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           IGNFR M ++PRFS +G R ++ VQK+ A+D+Y+VD+ S A +RLTNTLF NIS SYSPD
Sbjct: 241 IGNFRGMNISPRFSLDGNRVIMGVQKEGAIDLYNVDVHSYAFKRLTNTLFANISPSYSPD 300

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           SSQIVFESDREGK+QLYVMQS+GSDQ+RISQDK+A YFDP WSP  ++IAFTKFS  KFA
Sbjct: 301 SSQIVFESDREGKQQLYVMQSDGSDQRRISQDKDAFYFDPSWSPNDNIIAFTKFSEGKFA 360

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           IGVM+ DGSQER+LV D NLQ P WSP+GRSLIF+RKK  D GSKLYSI+LNGRNE LIN
Sbjct: 361 IGVMRVDGSQERILVTDFNLQTPIWSPNGRSLIFARKKMDDIGSKLYSINLNGRNEMLIN 420

Query: 433 TPAYASDPQWVGFMD 447
           TPAYA DP W+  +D
Sbjct: 421 TPAYALDPHWIAPVD 435


>gi|153008549|ref|YP_001369764.1| translocation protein TolB [Ochrobactrum anthropi ATCC 49188]
 gi|166229982|sp|A6WY81|TOLB_OCHA4 RecName: Full=Protein tolB; Flags: Precursor
 gi|151560437|gb|ABS13935.1| Tol-Pal system beta propeller repeat TolB [Ochrobactrum anthropi
           ATCC 49188]
          Length = 443

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 202/447 (45%), Positives = 295/447 (65%), Gaps = 5/447 (1%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
                I  ++    +    ++           A V++  N     P+ IA T F+S D+L
Sbjct: 1   MKIGIINTKIRTVFSAFACMIAASLVCTMPARAVVEININKGVIEPLPIAITDFLSADQL 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  ++ V++ DL+RS +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+  
Sbjct: 61  GPNITSVIAADLERSGLFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPD 120

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL+ EFRLWD    +Q+IG++FF++P +WR++AH I+D IY+ +TGEKG F++R++FV 
Sbjct: 121 GRLKAEFRLWDTFGGQQMIGQQFFTTPDNWRRVAHIIADAIYERLTGEKGYFDTRVVFVD 180

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES  +      L +MD+DGAN+RY++  R  I   PRFSPN+Q+V Y +++     +VYL
Sbjct: 181 ESGPAQKRVKRLAIMDQDGANVRYISDGR-AISLTPRFSPNRQEVTYMSFE-GGSPKVYL 238

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNT 300
           +     +  + +GNF  M +APRFS +G++ ++S +Q D + +IY++DL++ +T RLTN+
Sbjct: 239 LQLETGQ-RELVGNFPGMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRSTTRLTNS 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+ SASYSPD SQIVF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDL
Sbjct: 298 QAIDTSASYSPDGSQIVFSSDRGGRPQLYVMGADGSNPRRIS-AGDGSYSTPVWSPRGDL 356

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTK S  +F+IGVMK DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++
Sbjct: 357 IAFTKQSQGQFSIGVMKTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFT 416

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDL GRNE  I TP +ASDP W   ++
Sbjct: 417 IDLTGRNERQIQTPNFASDPAWSPLLE 443


>gi|114706798|ref|ZP_01439698.1| translocation protein TolB precursor [Fulvimarina pelagi HTCC2506]
 gi|114537746|gb|EAU40870.1| translocation protein TolB precursor [Fulvimarina pelagi HTCC2506]
          Length = 441

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 202/442 (45%), Positives = 290/442 (65%), Gaps = 5/442 (1%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPT-SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK 64
           F    +   ++  L+ + +  F    +  A V +  +  N  P+ IA T F S D +G +
Sbjct: 3   FSRTSIMRTLSAALVTLGMACFMAMGTAQARVTIDISGGNVEPLPIAITDFQSQDGIGAQ 62

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S VV  DL+RS +F  I + +F Q    PD+ P FQDW  + AQ LV GRV +E   RL
Sbjct: 63  ISSVVEADLKRSGLFAPIDKAAFIQTGLTPDTSPSFQDWTVINAQALVVGRVAREADGRL 122

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RVEFRLWD    +Q+ G++F++ P  WR+IAH I+D +Y+ ITGE G F+SR++FVSES 
Sbjct: 123 RVEFRLWDTFAGQQMDGQQFYADPNDWRRIAHIIADAVYKQITGENGYFDSRVVFVSESG 182

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L +MD+DGAN+RYLT  +D ++  PRFSPN+Q++ Y ++ + +  RVYL+  
Sbjct: 183 NKANRVKRLAIMDQDGANLRYLTEGQD-LVLTPRFSPNRQEITYMSFGNGEP-RVYLLQL 240

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  + +GNF  M  +PRFS +G++ ++S+Q+D   +IY++DL+S AT+RLTNT  I+
Sbjct: 241 ETGQ-REIVGNFPGMTFSPRFSPDGQKVVMSLQQDGNANIYAMDLRSRATQRLTNTAAID 299

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S SYSPD  +IVFESDR G++QLY M ++GS+Q+RIS   + SY  PVWSP+GDLIAFT
Sbjct: 300 TSPSYSPDGGRIVFESDRGGRQQLYTMNADGSNQQRISF-GDGSYSTPVWSPRGDLIAFT 358

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           K SG +F IGVM+ DGS ER+L    + + PTW+P+GR L+F R + G  G +L+SIDL+
Sbjct: 359 KQSGGQFQIGVMRPDGSGERILTTGYHNEGPTWAPNGRVLMFFRDQRGGGGPELWSIDLS 418

Query: 425 GRNETLINTPAYASDPQWVGFM 446
           GRNE  + T  +ASDP W   +
Sbjct: 419 GRNEQKVPTNGFASDPAWSPVL 440


>gi|306841416|ref|ZP_07474118.1| Tol-Pal system beta propeller repeat protein TolB [Brucella sp.
           BO2]
 gi|306844689|ref|ZP_07477274.1| Tol-Pal system beta propeller repeat protein TolB [Brucella sp.
           BO1]
 gi|306274861|gb|EFM56631.1| Tol-Pal system beta propeller repeat protein TolB [Brucella sp.
           BO1]
 gi|306288522|gb|EFM59874.1| Tol-Pal system beta propeller repeat protein TolB [Brucella sp.
           BO2]
          Length = 443

 Score =  486 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 198/447 (44%), Positives = 293/447 (65%), Gaps = 5/447 (1%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
                I  ++    +    ++           A V++  N     P+ IA T F+S D+L
Sbjct: 1   MKIGIINTKIRTVFSAFACMIAASLVCTMPARAVVEININKGVIEPLPIAITDFLSADQL 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  ++ V++ DL+RS +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+  
Sbjct: 61  GSNITSVIAADLERSGLFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPD 120

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL+ EFRLWD    +Q+IG++FF++P +WR++AH I+D IY+ +TGEKG F++R++FV 
Sbjct: 121 GRLKAEFRLWDTFGGQQMIGQQFFTTPDNWRRVAHIIADAIYERLTGEKGYFDTRVVFVD 180

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES  +      L +MD+DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL
Sbjct: 181 ESGPAQKRVKRLAIMDQDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFE-GGSPKVYL 238

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNT 300
           +     +  + +GNF  M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++
Sbjct: 239 LQLETGQ-RELVGNFPGMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSS 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+  ASYSPD SQIVF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDL
Sbjct: 298 QAIDTGASYSPDGSQIVFTSDRGGRPQLYVMGADGSNPRRISM-GDGSYSTPVWSPRGDL 356

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTK S  +F+IGVMK DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++
Sbjct: 357 IAFTKQSQGQFSIGVMKTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFT 416

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDL GRNE  I TP +ASDP W   ++
Sbjct: 417 IDLTGRNERQIQTPNFASDPAWSPLLE 443


>gi|62290569|ref|YP_222362.1| translocation protein TolB [Brucella abortus bv. 1 str. 9-941]
 gi|82700485|ref|YP_415059.1| translocation protein TolB [Brucella melitensis biovar Abortus
           2308]
 gi|189024787|ref|YP_001935555.1| translocation protein TolB [Brucella abortus S19]
 gi|225628265|ref|ZP_03786299.1| Tol-Pal system beta propeller repeat protein TolB [Brucella ceti
           str. Cudo]
 gi|225853152|ref|YP_002733385.1| translocation protein TolB [Brucella melitensis ATCC 23457]
 gi|237816074|ref|ZP_04595070.1| Tol-Pal system beta propeller repeat protein TolB [Brucella abortus
           str. 2308 A]
 gi|254689865|ref|ZP_05153119.1| translocation protein TolB [Brucella abortus bv. 6 str. 870]
 gi|254694358|ref|ZP_05156186.1| translocation protein TolB [Brucella abortus bv. 3 str. Tulya]
 gi|254698016|ref|ZP_05159844.1| translocation protein TolB [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700358|ref|ZP_05162186.1| translocation protein TolB [Brucella suis bv. 5 str. 513]
 gi|254730900|ref|ZP_05189478.1| translocation protein TolB [Brucella abortus bv. 4 str. 292]
 gi|256061734|ref|ZP_05451871.1| translocation protein TolB [Brucella neotomae 5K33]
 gi|256114265|ref|ZP_05455010.1| translocation protein TolB [Brucella melitensis bv. 3 str. Ether]
 gi|256160412|ref|ZP_05458101.1| translocation protein TolB [Brucella ceti M490/95/1]
 gi|256255618|ref|ZP_05461154.1| translocation protein TolB [Brucella ceti B1/94]
 gi|256258119|ref|ZP_05463655.1| translocation protein TolB [Brucella abortus bv. 9 str. C68]
 gi|256263356|ref|ZP_05465888.1| protein tolB [Brucella melitensis bv. 2 str. 63/9]
 gi|256370106|ref|YP_003107617.1| translocation protein TolB precursor [Brucella microti CCM 4915]
 gi|260167912|ref|ZP_05754723.1| translocation protein TolB [Brucella sp. F5/99]
 gi|260547187|ref|ZP_05822925.1| tolB [Brucella abortus NCTC 8038]
 gi|260755396|ref|ZP_05867744.1| protein tolB [Brucella abortus bv. 6 str. 870]
 gi|260758618|ref|ZP_05870966.1| protein tolB [Brucella abortus bv. 4 str. 292]
 gi|260762450|ref|ZP_05874787.1| protein tolB [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884412|ref|ZP_05896026.1| protein tolB [Brucella abortus bv. 9 str. C68]
 gi|261214667|ref|ZP_05928948.1| protein tolB [Brucella abortus bv. 3 str. Tulya]
 gi|261222821|ref|ZP_05937102.1| protein tolB [Brucella ceti B1/94]
 gi|261325738|ref|ZP_05964935.1| protein tolB [Brucella neotomae 5K33]
 gi|261750852|ref|ZP_05994561.1| protein tolB [Brucella suis bv. 5 str. 513]
 gi|261757350|ref|ZP_06001059.1| protein tolB [Brucella sp. F5/99]
 gi|265995569|ref|ZP_06108126.1| protein tolB [Brucella melitensis bv. 3 str. Ether]
 gi|265998780|ref|ZP_06111337.1| protein tolB [Brucella ceti M490/95/1]
 gi|294850948|ref|ZP_06791624.1| tol-Pal system beta propeller repeat protein TolB [Brucella sp.
           NVSL 07-0026]
 gi|297248968|ref|ZP_06932676.1| tol-Pal system beta propeller repeat protein TolB [Brucella abortus
           bv. 5 str. B3196]
 gi|75496344|sp|Q57BI3|TOLB_BRUAB RecName: Full=Protein tolB; Flags: Precursor
 gi|119371037|sp|Q2YRD7|TOLB_BRUA2 RecName: Full=Protein tolB; Flags: Precursor
 gi|226705866|sp|B2S7D4|TOLB_BRUA1 RecName: Full=Protein tolB; Flags: Precursor
 gi|254764838|sp|C0REV9|TOLB_BRUMB RecName: Full=Protein tolB; Flags: Precursor
 gi|62196701|gb|AAX75001.1| TolB, tolB protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616586|emb|CAJ11665.1| TolB, N-terminal [Brucella melitensis biovar Abortus 2308]
 gi|189020359|gb|ACD73081.1| TolB, N-terminal [Brucella abortus S19]
 gi|225616111|gb|EEH13159.1| Tol-Pal system beta propeller repeat protein TolB [Brucella ceti
           str. Cudo]
 gi|225641517|gb|ACO01431.1| Tol-Pal system beta propeller repeat protein TolB [Brucella
           melitensis ATCC 23457]
 gi|237788737|gb|EEP62949.1| Tol-Pal system beta propeller repeat protein TolB [Brucella abortus
           str. 2308 A]
 gi|256000269|gb|ACU48668.1| translocation protein TolB precursor [Brucella microti CCM 4915]
 gi|260095552|gb|EEW79430.1| tolB [Brucella abortus NCTC 8038]
 gi|260668936|gb|EEX55876.1| protein tolB [Brucella abortus bv. 4 str. 292]
 gi|260672876|gb|EEX59697.1| protein tolB [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675504|gb|EEX62325.1| protein tolB [Brucella abortus bv. 6 str. 870]
 gi|260873940|gb|EEX81009.1| protein tolB [Brucella abortus bv. 9 str. C68]
 gi|260916274|gb|EEX83135.1| protein tolB [Brucella abortus bv. 3 str. Tulya]
 gi|260921405|gb|EEX88058.1| protein tolB [Brucella ceti B1/94]
 gi|261301718|gb|EEY05215.1| protein tolB [Brucella neotomae 5K33]
 gi|261737334|gb|EEY25330.1| protein tolB [Brucella sp. F5/99]
 gi|261740605|gb|EEY28531.1| protein tolB [Brucella suis bv. 5 str. 513]
 gi|262553469|gb|EEZ09238.1| protein tolB [Brucella ceti M490/95/1]
 gi|262766853|gb|EEZ12471.1| protein tolB [Brucella melitensis bv. 3 str. Ether]
 gi|263093355|gb|EEZ17424.1| protein tolB [Brucella melitensis bv. 2 str. 63/9]
 gi|294821591|gb|EFG38587.1| tol-Pal system beta propeller repeat protein TolB [Brucella sp.
           NVSL 07-0026]
 gi|297174101|gb|EFH33458.1| tol-Pal system beta propeller repeat protein TolB [Brucella abortus
           bv. 5 str. B3196]
 gi|326409710|gb|ADZ66775.1| TolB, N-terminal protein [Brucella melitensis M28]
 gi|326539417|gb|ADZ87632.1| Tol-Pal system beta propeller repeat protein TolB [Brucella
           melitensis M5-90]
          Length = 443

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 197/447 (44%), Positives = 293/447 (65%), Gaps = 5/447 (1%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
                I  ++    +    ++           A V++  N     P+ IA T F+S D+L
Sbjct: 1   MKIGIINTKIRTVFSAFACMIAASLVCTMPARAVVEININKGVIEPLPIAITDFLSADQL 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  ++ V++ DL+RS +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+  
Sbjct: 61  GSNITSVIAADLERSGLFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPD 120

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL+ EFRLWD    +Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV 
Sbjct: 121 GRLKAEFRLWDTFGGQQMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVD 180

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES  +      L +MD+DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL
Sbjct: 181 ESGPAQKRVKRLAIMDQDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFE-GGSPKVYL 238

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNT 300
           +     +  + +GNF  M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++
Sbjct: 239 LQLETGQ-RELVGNFPGMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSS 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+  ASYSPD SQIVF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDL
Sbjct: 298 QAIDTGASYSPDGSQIVFTSDRGGRPQLYVMGADGSNPRRISM-GDGSYSTPVWSPRGDL 356

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTK S  +F+IGVMK DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++
Sbjct: 357 IAFTKQSQGQFSIGVMKTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFT 416

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDL GRNE  I TP +ASDP W   ++
Sbjct: 417 IDLTGRNERQIQTPNFASDPAWSPLLE 443


>gi|254719700|ref|ZP_05181511.1| translocation protein TolB [Brucella sp. 83/13]
 gi|265984714|ref|ZP_06097449.1| tolB [Brucella sp. 83/13]
 gi|306837841|ref|ZP_07470703.1| Tol-Pal system beta propeller repeat protein TolB [Brucella sp. NF
           2653]
 gi|264663306|gb|EEZ33567.1| tolB [Brucella sp. 83/13]
 gi|306407080|gb|EFM63297.1| Tol-Pal system beta propeller repeat protein TolB [Brucella sp. NF
           2653]
          Length = 443

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 197/447 (44%), Positives = 292/447 (65%), Gaps = 5/447 (1%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
                I  ++    +    ++           A V++  N     P+ IA T F+S D+L
Sbjct: 1   MKIGIINTKIRTVFSAFACMIAASLVCTMPARAVVEININKGVIEPLPIAITDFLSADQL 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  ++ V++ DL+RS +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+  
Sbjct: 61  GSNITSVIAADLERSGLFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPD 120

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL+ EFRLWD    +Q+IG++FF++P +WR++AH I+D IY+ +TGEKG F++R++FV 
Sbjct: 121 GRLKAEFRLWDTFGGQQMIGQQFFTTPDNWRRVAHIIADAIYERLTGEKGYFDTRVVFVD 180

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES  +      L +MD+DGAN+ +++  R  +   PRFSPN+Q+V Y +++     +VYL
Sbjct: 181 ESGPAQKRVKRLAIMDQDGANVSFISDGR-ALSLTPRFSPNRQEVTYMSFE-GGSPKVYL 238

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNT 300
           +     +  + +GNF  M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++
Sbjct: 239 LQLETGQ-RELVGNFPGMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSS 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+  ASYSPD SQIVF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDL
Sbjct: 298 QAIDTGASYSPDGSQIVFTSDRGGRPQLYVMGADGSNPRRISM-GDGSYSTPVWSPRGDL 356

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTK S  +F+IGVMK DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++
Sbjct: 357 IAFTKQSQGQFSIGVMKTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFT 416

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDL GRNE  I TP +ASDP W   ++
Sbjct: 417 IDLTGRNERQIQTPNFASDPAWSPLLE 443


>gi|17986622|ref|NP_539256.1| translocation protein TolB [Brucella melitensis bv. 1 str. 16M]
 gi|256045307|ref|ZP_05448201.1| translocation protein TolB [Brucella melitensis bv. 1 str. Rev.1]
 gi|260565802|ref|ZP_05836285.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|265991732|ref|ZP_06104289.1| protein tolB [Brucella melitensis bv. 1 str. Rev.1]
 gi|32699715|sp|Q93TG4|TOLB_BRUME RecName: Full=Protein tolB; Flags: Precursor
 gi|13898976|gb|AAK48918.1|AF358662_5 TolB protein [Brucella melitensis]
 gi|17982236|gb|AAL51520.1| tolb protein [Brucella melitensis bv. 1 str. 16M]
 gi|260151175|gb|EEW86270.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
 gi|263002688|gb|EEZ15091.1| protein tolB [Brucella melitensis bv. 1 str. Rev.1]
          Length = 443

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 197/447 (44%), Positives = 292/447 (65%), Gaps = 5/447 (1%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
                I  ++    +    ++           A V++  N     P+ IA T F+S D+L
Sbjct: 1   MKIGIINTKIRTVFSAFACMIAASLVCTMPARAVVEININKGVIEPLPIAITDFLSADQL 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  ++ V++ DL+RS +F  I   +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+  
Sbjct: 61  GSNITSVIAADLERSGLFAPIDTGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPD 120

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL+ EFRLWD    +Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV 
Sbjct: 121 GRLKAEFRLWDTFGGQQMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVD 180

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES  +      L +MD+DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL
Sbjct: 181 ESGPAQKRVKRLAIMDQDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFE-GGSPKVYL 238

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNT 300
           +     +  + +GNF  M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++
Sbjct: 239 LQLETGQ-RELVGNFPGMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSS 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+  ASYSPD SQIVF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDL
Sbjct: 298 QAIDTGASYSPDGSQIVFTSDRGGRPQLYVMGADGSNPRRISM-GDGSYSTPVWSPRGDL 356

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTK S  +F+IGVMK DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++
Sbjct: 357 IAFTKQSQGQFSIGVMKTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFT 416

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDL GRNE  I TP +ASDP W   ++
Sbjct: 417 IDLTGRNERQIQTPNFASDPAWSPLLE 443


>gi|254703475|ref|ZP_05165303.1| translocation protein TolB [Brucella suis bv. 3 str. 686]
 gi|261754105|ref|ZP_05997814.1| protein tolB [Brucella suis bv. 3 str. 686]
 gi|261743858|gb|EEY31784.1| protein tolB [Brucella suis bv. 3 str. 686]
          Length = 443

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/447 (43%), Positives = 291/447 (65%), Gaps = 5/447 (1%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
                I  ++    +    ++           A V++  N     P+ IA T F+S D+L
Sbjct: 1   MKIGIINTKIRTVFSAFACMIAASLVCTMPARAVVEININKGVIEPLPIAITDFLSADQL 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  ++ V++ DL+RS +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+  
Sbjct: 61  GSNITSVIAADLERSGLFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPD 120

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL+ EF LWD    +Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV 
Sbjct: 121 GRLKAEFHLWDTFGGQQMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVD 180

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES  +      L +MD+DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL
Sbjct: 181 ESGPAQKRVKRLAIMDQDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFE-GGSPKVYL 238

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNT 300
           +     +  + +GNF  M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT+ 
Sbjct: 239 LQLETGQ-RELVGNFPGMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSN 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+  ASYSPD SQIVF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDL
Sbjct: 298 QAIDTGASYSPDGSQIVFTSDRGGRPQLYVMGADGSNPRRISM-GDGSYSTPVWSPRGDL 356

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTK S  +F+IGVMK DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++
Sbjct: 357 IAFTKQSQGQFSIGVMKTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFT 416

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDL GRNE  I TP +ASDP W   ++
Sbjct: 417 IDLTGRNERQIQTPNFASDPAWSPLLE 443


>gi|23502555|ref|NP_698682.1| translocation protein TolB [Brucella suis 1330]
 gi|32699703|sp|Q8FZ07|TOLB_BRUSU RecName: Full=Protein tolB; Flags: Precursor
 gi|23348555|gb|AAN30597.1| tolB protein [Brucella suis 1330]
          Length = 443

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/447 (43%), Positives = 292/447 (65%), Gaps = 5/447 (1%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
                I  ++    +    ++           A V++  N     P+ IA T F+S D+L
Sbjct: 1   MKIGIINTKIRTVFSAFACMIAASLVCTMPARAVVEININKGVIEPLPIAITDFLSADQL 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  ++ V++ DL+RS +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+  
Sbjct: 61  GSNITSVIAADLERSGLFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPD 120

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL+ EF LWD    +Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV 
Sbjct: 121 GRLKAEFHLWDTFGGQQMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVD 180

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES  +      L +MD+DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL
Sbjct: 181 ESGPAQKRVKRLAIMDQDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFE-GGSPKVYL 238

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNT 300
           +     +  + +GNF  M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++
Sbjct: 239 LQLETGQ-RELVGNFPGMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSS 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+  ASYSPD SQIVF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDL
Sbjct: 298 QAIDTGASYSPDGSQIVFTSDRGGRPQLYVMGADGSNPRRISM-GDGSYSTPVWSPRGDL 356

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTK S  +F+IGVMK DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++
Sbjct: 357 IAFTKQSQGQFSIGVMKTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFT 416

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDL GRNE  I TP +ASDP W   ++
Sbjct: 417 IDLTGRNERQIQTPNFASDPAWSPLLE 443


>gi|148560006|ref|YP_001259549.1| translocation protein TolB [Brucella ovis ATCC 25840]
 gi|166229975|sp|A5VS52|TOLB_BRUO2 RecName: Full=Protein tolB; Flags: Precursor
 gi|148371263|gb|ABQ61242.1| Tol-Pal system beta propeller repeat protein TolB [Brucella ovis
           ATCC 25840]
          Length = 443

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 197/447 (44%), Positives = 292/447 (65%), Gaps = 5/447 (1%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
                I  ++    +    ++           A V++  N     P+ IA T F+S D+L
Sbjct: 1   MKIGIINTKIRTVFSAFACMIAASLVCTMPARAVVEININKGVIEPLPIAITDFLSADQL 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  ++ V++ DL+RS +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+  
Sbjct: 61  GSNITSVIAADLERSGLFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPD 120

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL+ EFRLWD    +Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV 
Sbjct: 121 GRLKAEFRLWDTFGGQQMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVD 180

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES  +      L +MD+DGAN+R+++  R  +   PRFSPN Q+V Y +++     +VYL
Sbjct: 181 ESGPAQKRVKRLAIMDQDGANVRFISDGR-ALSLTPRFSPNWQEVTYMSFE-GGSPKVYL 238

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNT 300
           +     +  + +GNF  M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++
Sbjct: 239 LQLETGQ-RELVGNFPGMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSS 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+  ASYSPD SQIVF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDL
Sbjct: 298 QAIDTGASYSPDGSQIVFTSDRGGRPQLYVMGADGSNPRRISM-GDGSYSTPVWSPRGDL 356

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTK S  +F+IGVMK DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++
Sbjct: 357 IAFTKQSQGQFSIGVMKTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFT 416

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDL GRNE  I TP +ASDP W   ++
Sbjct: 417 IDLTGRNERQIQTPNFASDPAWSPLLE 443


>gi|254714558|ref|ZP_05176369.1| translocation protein TolB [Brucella ceti M644/93/1]
 gi|254717455|ref|ZP_05179266.1| translocation protein TolB [Brucella ceti M13/05/1]
 gi|261219286|ref|ZP_05933567.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261322347|ref|ZP_05961544.1| conserved hypothetical protein [Brucella ceti M644/93/1]
 gi|260924375|gb|EEX90943.1| conserved hypothetical protein [Brucella ceti M13/05/1]
 gi|261295037|gb|EEX98533.1| conserved hypothetical protein [Brucella ceti M644/93/1]
          Length = 443

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 196/447 (43%), Positives = 293/447 (65%), Gaps = 5/447 (1%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
                I  ++    +    ++           A V++  N     P+ IA T F+S D+L
Sbjct: 1   MKIGIINTKIRTVFSAFACMIAASLVCTMPARAVVEININKGVIEPLPIAITDFLSADQL 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  ++ V++ DL+RS +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+  
Sbjct: 61  GSNITSVIAADLERSGLFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPD 120

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL+ EFRLWD    +Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV 
Sbjct: 121 GRLKAEFRLWDTFGGQQMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVD 180

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES  +      L +MD+DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL
Sbjct: 181 ESGPAQKRVKRLAIMDQDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFE-GGSPKVYL 238

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNT 300
           +     +  + +GNF  M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++
Sbjct: 239 LQLETGQ-RELVGNFPGMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSS 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+  ASYSP+ SQIVF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDL
Sbjct: 298 QAIDTGASYSPNGSQIVFTSDRGGRPQLYVMGADGSNPRRISM-GDGSYSTPVWSPRGDL 356

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTK S  +F+IGVMK DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++
Sbjct: 357 IAFTKQSQGQFSIGVMKTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFT 416

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDL GRNE  I TP +ASDP W   ++
Sbjct: 417 IDLTGRNERQIQTPNFASDPAWSPLLE 443


>gi|90418976|ref|ZP_01226887.1| tolB protein, periplasmic component, biopolymer transport system
           [Aurantimonas manganoxydans SI85-9A1]
 gi|90337056|gb|EAS50761.1| tolB protein, periplasmic component, biopolymer transport system
           [Aurantimonas manganoxydans SI85-9A1]
          Length = 436

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 199/437 (45%), Positives = 286/437 (65%), Gaps = 7/437 (1%)

Query: 11  LNMKINLCLLLVLIGG---FFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
           + M I   L++ +             A V++     N  P+ IA T F S D +G ++S+
Sbjct: 1   MKMIIKGALVIAMAISGAFVALAPAAAAVEIDVTQGNVEPLPIAITDFQSADGIGKQISD 60

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           VV  DL+RS +F  I + +F Q     D+ P F+DW  + AQ LV GRV  E   RLRVE
Sbjct: 61  VVQADLKRSGLFAPIDRAAFIQSGLTTDTTPSFKDWTVINAQALVVGRVSPEADGRLRVE 120

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           FRLWD    +Q+ G++F+++P +WR++AH I+D IY+ +TGEKG F++RI+FV+ES    
Sbjct: 121 FRLWDTFAGQQLDGQQFYTNPENWRRVAHIIADAIYERLTGEKGYFDTRIVFVAESGTKD 180

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L +MD+DGAN+RYLT   + ++  PRFSP++Q+V Y ++ + +  RVYL+     
Sbjct: 181 KRVKRLAIMDQDGANLRYLTDGSE-LVLTPRFSPSRQEVTYMSFGNGEP-RVYLLQLETG 238

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  + +GNF  M  +PRFS +G++ ++S+Q++   +IY++DL+S AT RLT+T  I+ S 
Sbjct: 239 Q-REIVGNFPGMTFSPRFSPDGQKVIMSLQQEGNANIYAMDLRSRATTRLTSTTAIDTSP 297

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SYSPD  +IVFESDR G++QLYVM ++GS Q+RIS   + SY  PVWSP+GDLIAFTK S
Sbjct: 298 SYSPDGRRIVFESDRGGRQQLYVMGADGSGQQRISF-GDGSYSTPVWSPRGDLIAFTKQS 356

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G +F IGVM+ DGS ER+L    + + PTW+P+GR ++F R + G  G +LYSIDL G N
Sbjct: 357 GGQFQIGVMRPDGSGERILTSGFHNEGPTWAPNGRVVMFFRDQRGGGGPQLYSIDLTGYN 416

Query: 428 ETLINTPAYASDPQWVG 444
           E  I TP+YASDP W  
Sbjct: 417 EQKIPTPSYASDPAWSP 433


>gi|254708436|ref|ZP_05170264.1| translocation protein TolB [Brucella pinnipedialis M163/99/10]
 gi|254708711|ref|ZP_05170522.1| translocation protein TolB [Brucella pinnipedialis B2/94]
 gi|256030237|ref|ZP_05443851.1| translocation protein TolB [Brucella pinnipedialis M292/94/1]
 gi|261315936|ref|ZP_05955133.1| translocation protein TolB [Brucella pinnipedialis M163/99/10]
 gi|261316202|ref|ZP_05955399.1| tolB [Brucella pinnipedialis B2/94]
 gi|265987265|ref|ZP_06099822.1| protein tolB [Brucella pinnipedialis M292/94/1]
 gi|261295425|gb|EEX98921.1| tolB [Brucella pinnipedialis B2/94]
 gi|261304962|gb|EEY08459.1| translocation protein TolB [Brucella pinnipedialis M163/99/10]
 gi|264659462|gb|EEZ29723.1| protein tolB [Brucella pinnipedialis M292/94/1]
          Length = 443

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 196/447 (43%), Positives = 292/447 (65%), Gaps = 5/447 (1%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
                I  ++    +    ++           A V++  N     P+ IA T F+S D+L
Sbjct: 1   MKIGIINTKIRTVFSAFACMIAASLVCTMPARAVVEININKGVIEPLPIAITDFLSADQL 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  ++  ++ DL+RS +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+  
Sbjct: 61  GSNITSAIAADLERSGLFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPD 120

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL+ EFRLWD    +Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV 
Sbjct: 121 GRLKAEFRLWDTFGGQQMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVD 180

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES  +      L +MD+DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL
Sbjct: 181 ESGPAQKRVKRLAIMDQDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFE-GGSPKVYL 238

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNT 300
           +     +  + +GNF  M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++
Sbjct: 239 LQLETGQ-RELVGNFPGMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSS 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+  ASYSPD SQIVF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDL
Sbjct: 298 QAIDTGASYSPDGSQIVFTSDRGGRPQLYVMGADGSNPRRISM-GDGSYSTPVWSPRGDL 356

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTK S  +F+IGVMK DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++
Sbjct: 357 IAFTKQSQGQFSIGVMKTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFT 416

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDL GRNE  I TP +ASDP W   ++
Sbjct: 417 IDLTGRNERQIQTPNFASDPAWSPLLE 443


>gi|161619626|ref|YP_001593513.1| translocation protein TolB [Brucella canis ATCC 23365]
 gi|260568782|ref|ZP_05839250.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
 gi|189035979|sp|A9M7J5|TOLB_BRUC2 RecName: Full=Protein tolB; Flags: Precursor
 gi|161336437|gb|ABX62742.1| Tol-Pal system beta propeller repeat protein TolB [Brucella canis
           ATCC 23365]
 gi|260154166|gb|EEW89248.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
          Length = 443

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 195/447 (43%), Positives = 292/447 (65%), Gaps = 5/447 (1%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
                I  ++    +    ++           A V++  N     P+ IA T F+S D+L
Sbjct: 1   MKIGIINTKIRTVFSAFACMIAASLVCTMPARAVVEININKGVIEPLPIAITDFLSADQL 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  ++ V++ DL+RS +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+  
Sbjct: 61  GSNITSVIAADLERSGLFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPD 120

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL+ EF LWD    +++IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV 
Sbjct: 121 GRLKAEFHLWDTFGGQRMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVD 180

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES  +      L +MD+DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL
Sbjct: 181 ESGPAQKRVKRLAIMDQDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFE-GGSPKVYL 238

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNT 300
           +     +  + +GNF  M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++
Sbjct: 239 LQLETGQ-RELVGNFPGMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSS 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+  ASYSPD SQIVF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDL
Sbjct: 298 QAIDTGASYSPDGSQIVFTSDRGGRPQLYVMGADGSNPRRISM-GDGSYSTPVWSPRGDL 356

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTK S  +F+IGVMK DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++
Sbjct: 357 IAFTKQSQGQFSIGVMKTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFT 416

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDL GRNE  I TP +ASDP W   ++
Sbjct: 417 IDLTGRNERQIQTPNFASDPAWSPLLE 443


>gi|163845276|ref|YP_001622931.1| translocation protein TolB [Brucella suis ATCC 23445]
 gi|189035980|sp|A9WWH3|TOLB_BRUSI RecName: Full=Protein tolB; Flags: Precursor
 gi|163675999|gb|ABY40109.1| Tol-Pal system beta propeller repeat protein TolB [Brucella suis
           ATCC 23445]
          Length = 443

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 195/447 (43%), Positives = 291/447 (65%), Gaps = 5/447 (1%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
                I  ++    +    ++           A V++  N     P+ IA T F+S D+L
Sbjct: 1   MKIGIINTKIRTVFSAFACMIAASLVCTMPARAVVEININKGVIEPLPIAITDFLSADQL 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  ++ V++ DL+RS +F  I + +F +KI+NPD+ PRF+DW  + AQ LVTGR+ K+  
Sbjct: 61  GSNITSVIAADLERSGLFAPIDKGAFIEKISNPDAAPRFEDWKVINAQALVTGRITKQPD 120

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL+ EF LWD    +Q+IG++FF++P +WR++AH I+D IY+ +TG+KG F++R++FV 
Sbjct: 121 GRLKAEFHLWDTFGGQQMIGQQFFTTPDNWRRVAHIIADAIYERLTGDKGYFDTRVVFVD 180

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES  +      L +MD+DGAN+R+++  R  +   PRFSPN+Q+V Y +++     +VYL
Sbjct: 181 ESGPAQKRVKRLAIMDQDGANVRFISDGR-ALSLTPRFSPNRQEVTYMSFE-GGSPKVYL 238

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNT 300
           +     +  + +GNF  M +APRFS +G++ ++S +Q D + +IY++DL++  T RLT++
Sbjct: 239 LQLETGQ-RELVGNFPGMTIAPRFSPDGQKVVMSLLQDDGSANIYTMDLRNRTTTRLTSS 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+  ASYSPD SQIVF SDR G+ QLYVM ++GS+ +RIS   + SY  PVWSP+GDL
Sbjct: 298 QAIDTGASYSPDGSQIVFTSDRGGRPQLYVMGADGSNPRRISM-GDGSYSTPVWSPRGDL 356

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFTK S  +F+IGV K DGS ERLL    + + PTW+P+GR L+F RK  G  G KL++
Sbjct: 357 IAFTKQSQGQFSIGVTKTDGSGERLLTSGFHNEGPTWAPNGRVLMFFRKAAGAGGPKLFT 416

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           IDL GRNE  I TP +ASDP W   ++
Sbjct: 417 IDLTGRNERQIQTPNFASDPAWSPLLE 443


>gi|13473330|ref|NP_104897.1| translocation protein TolB [Mesorhizobium loti MAFF303099]
 gi|32699716|sp|Q98F84|TOLB_RHILO RecName: Full=Protein tolB; Flags: Precursor
 gi|14024079|dbj|BAB50683.1| TolB protein precursor [Mesorhizobium loti MAFF303099]
          Length = 436

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 195/442 (44%), Positives = 286/442 (64%), Gaps = 7/442 (1%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +   L   + +  + + +    P    A V++  N  N  P+ IA T F   D LG ++S
Sbjct: 1   MRSFLKPLLTIAAMALGMTAVIPMPAWALVELNVNKGNVEPLPIAITDFQGGDALGAQIS 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           ++V+ DL+RS +F  I + +F +KI+NPD+ PRF DW  + AQ LVTG V KE   R+R 
Sbjct: 61  QIVTADLKRSGLFAPIDKSAFIEKISNPDAAPRFDDWKVINAQALVTGSVSKEADGRIRA 120

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++RLWD    +Q+ G++FF++ A+ R++AH I+D IY+ +TGEKG F++R++F+ ES   
Sbjct: 121 QYRLWDTFAGQQMSGEQFFANDANQRRVAHIIADAIYERLTGEKGYFDTRVVFIDESGAK 180

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              K  L +MD+DGAN+RYL+  R  I+  PRFSPN+Q++ Y +Y+     RVYL+    
Sbjct: 181 NARKKRLAIMDQDGANVRYLSDGRS-IVLTPRFSPNRQEITYMSYESGQP-RVYLLQIET 238

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +  + +GNF  M  APRFS +G++ ++S ++ D   +I+++DL+S +T RLTN+  I+ 
Sbjct: 239 GQ-RELVGNFPGMTFAPRFSPDGQKVIMSLLRDDGNSNIFAMDLRSRSTTRLTNSTAIDT 297

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S SYSPD S++VF SDR G+ Q+YVM ++GS Q RIS   +  Y  PVWSP+GDLIAFTK
Sbjct: 298 SPSYSPDGSKVVFTSDRGGRAQIYVMGADGSGQTRISF-GDGVYSTPVWSPRGDLIAFTK 356

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +G +F IGVMK DGS ER+L      + PTW+P+GR L+F R  +G  G KL S+DL G
Sbjct: 357 QTGGEFQIGVMKTDGSGERILSSGFQQEGPTWAPNGRVLMFFRDSNG--GPKLVSVDLTG 414

Query: 426 RNETLINTPAYASDPQWVGFMD 447
           RNE  I T  +ASDP W   ++
Sbjct: 415 RNEQPIPTANFASDPAWSPLLE 436


>gi|304393324|ref|ZP_07375252.1| Tol-Pal system beta propeller repeat protein TolB [Ahrensia sp.
           R2A130]
 gi|303294331|gb|EFL88703.1| Tol-Pal system beta propeller repeat protein TolB [Ahrensia sp.
           R2A130]
          Length = 444

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 191/448 (42%), Positives = 278/448 (62%), Gaps = 5/448 (1%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M +       L       +    +      +  A V++     N  P+ IA T F+    
Sbjct: 1   MMISAMPRTSLTRLTAALISAFAMIVMATFTAQARVEIDVTRGNVEPLPIAITSFLGEGG 60

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           LG +++ VV+ DL+RS +F  I   +F + I++ ++ P FQ W ++ AQ LVTGRV+ EG
Sbjct: 61  LGAEIAGVVTSDLKRSGLFAPIDPAAFIENISDTNAQPNFQSWTAIKAQALVTGRVVSEG 120

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
             R R EFRLWD    +Q++G ++ ++P + R++ H I+D IY+++TGEKG F++R+++V
Sbjct: 121 GGRFRTEFRLWDTYGGEQLVGSQYSTNPQNARRVGHIIADAIYKALTGEKGYFDTRVVYV 180

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +ES         L +MD+DG N R LT   D ++  PRFSP++Q++ Y ++      RVY
Sbjct: 181 AESGPKNKRVKQLAIMDQDGFNNRMLTNGSD-LVLTPRFSPSRQEITYMSF-AGGEPRVY 238

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L+     +  + +GNF SM  +PRFS +G+R ++S+Q+D   +IYS+DL+S +T RLTNT
Sbjct: 239 LLQIETGQ-REVVGNFPSMTFSPRFSPDGQRIVMSLQQDGNANIYSMDLRSRSTTRLTNT 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+ S S+SPD  +IVFESDR G++QLYVM ++GS   RIS     SY  PVWSP+GDL
Sbjct: 298 PAIDTSPSFSPDGRRIVFESDRGGRQQLYVMGADGSSPTRISFGT-GSYSTPVWSPRGDL 356

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLY 419
           IAFTK SG  F IGVM+ DG  ER+L E  + + PTW+P+GR L+F R+  G   G KLY
Sbjct: 357 IAFTKRSGGNFLIGVMRPDGKGERILTEGYHNEGPTWAPNGRLLMFFRETPGAGGGPKLY 416

Query: 420 SIDLNGRNETLINTPAYASDPQWVGFMD 447
           SIDL GRNE  + T  +ASDP W   +D
Sbjct: 417 SIDLTGRNEQQVPTKTFASDPAWSPLLD 444


>gi|110635500|ref|YP_675708.1| translocation protein TolB [Mesorhizobium sp. BNC1]
 gi|118574584|sp|Q11DI2|TOLB_MESSB RecName: Full=Protein tolB; Flags: Precursor
 gi|110286484|gb|ABG64543.1| TolB-like protein [Chelativorans sp. BNC1]
          Length = 439

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 192/442 (43%), Positives = 281/442 (63%), Gaps = 4/442 (0%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +       + +  L++ +         A V++  N     PV IA T F+S    G ++S
Sbjct: 1   MRNFFKTAVAITSLVMGLVAMAVVPARALVEIDVNRGVVEPVPIAITDFLSAGGRGAEIS 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            V++ DL+RS +F  I + +F +KI+NPD  PRF+DW  + AQ +VTGRV +E   RL+ 
Sbjct: 61  AVIAADLKRSGLFAPIDRGAFIEKISNPDVAPRFEDWKVINAQAIVTGRVTEEPGGRLKA 120

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           EFRLWD    +Q++G++FF+ PA WR++AH I+D IY+  TGEKG F+SRI+FV ES   
Sbjct: 121 EFRLWDTFAGQQLVGEQFFAKPADWRRVAHIIADTIYEQFTGEKGYFDSRIVFVDESGSK 180

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L +MD+DGAN R LT  R  I+ +P FSP +Q++ Y +++     +VYL+    
Sbjct: 181 ENRVKRLAIMDQDGANYRALTDGRS-IVLKPSFSPQRQEITYVSFEGGQP-QVYLLQIET 238

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +      NF +M  A RF+  G + ++S ++ D   +IY++DL++  T RLT+T  I+ 
Sbjct: 239 GQRELVGNNFPTMSFASRFNPVGDKIIMSLLRTDGNSNIYTMDLKTRTTARLTDTNAIDT 298

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S SYSPD +++VF SDR G+ Q+YVM ++GS+ +RIS   + +Y +PVWSP+GDLIAFTK
Sbjct: 299 SPSYSPDGNKVVFTSDRGGRAQIYVMNADGSNPQRISF-GDGTYSEPVWSPRGDLIAFTK 357

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            SG +F IG+M+ DGS ER+L     ++ PTWSP+GR ++F R+  G  G KLYSIDL G
Sbjct: 358 QSGGQFQIGIMRTDGSGERILSTGFQIEGPTWSPNGRVIMFFRQDAGAAGPKLYSIDLTG 417

Query: 426 RNETLINTPAYASDPQWVGFMD 447
           RNE LI TP +ASDP W   ++
Sbjct: 418 RNEQLIPTPNFASDPAWSPLLN 439


>gi|222149663|ref|YP_002550620.1| translocation protein TolB [Agrobacterium vitis S4]
 gi|254764836|sp|B9JRY0|TOLB_AGRVS RecName: Full=Protein tolB; Flags: Precursor
 gi|221736645|gb|ACM37608.1| periplasmic component of the Tol biopolymer transport system
           [Agrobacterium vitis S4]
          Length = 435

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 207/433 (47%), Positives = 291/433 (67%), Gaps = 4/433 (0%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           + + ++LV + G F T   A V++  N  N  P+ IA   F+S + +G K+S VV  DL+
Sbjct: 7   LRILIVLVGMAGAFATPAMALVEININKGNVEPMPIAIPDFLSANGIGAKISAVVEADLK 66

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           RS +F  ++  +F  K  NPD  P  Q+W  L AQ LV GR+ +EG  RLR EFRLWD  
Sbjct: 67  RSGLFAPVNHGAFIDKQINPDQAPNMQNWTVLNAQALVVGRITQEGDGRLRAEFRLWDTY 126

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             +Q+ G++F++ P +WR++AH I+D IY+ ITGEKG F++RI+FV+ES      K  L 
Sbjct: 127 AGQQMSGQQFYTQPENWRRVAHIIADAIYERITGEKGYFDTRIVFVAESGTKTDRKRQLA 186

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD+DG N+R LT + + ++  PRFSPN+Q+V Y +++  +  RVYL+     +  + +G
Sbjct: 187 IMDQDGENVRMLTNTAN-LVLTPRFSPNRQEVTYMSFE-GNQPRVYLLQLETGQ-REVVG 243

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           NF  M  +PRFS +G+R ++S+Q+D   +IY++DL+S  T RLT+T  I+ S SY+PD  
Sbjct: 244 NFPGMTFSPRFSPDGQRVIMSLQQDANSNIYTMDLRSRTTTRLTSTAAIDTSPSYAPDGR 303

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +IVFESDR G++QLYVM S+GS Q RIS   E SY  PVWSP+GDLIAFTK SG KF+IG
Sbjct: 304 RIVFESDRGGRQQLYVMNSDGSGQTRISF-GEGSYSTPVWSPRGDLIAFTKQSGGKFSIG 362

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           VMK DGS ERLL    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE L+ TP
Sbjct: 363 VMKPDGSGERLLTTGFHNEGPTWAPNGRVLMFFRQAAGSGGPQLYSIDLTGYNEQLVKTP 422

Query: 435 AYASDPQWVGFMD 447
           ++ASDP W   ++
Sbjct: 423 SFASDPAWSPLLE 435


>gi|328542544|ref|YP_004302653.1| translocation protein TolB [polymorphum gilvum SL003B-26A1]
 gi|326412290|gb|ADZ69353.1| translocation protein TolB [Polymorphum gilvum SL003B-26A1]
          Length = 449

 Score =  474 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 184/421 (43%), Positives = 272/421 (64%), Gaps = 8/421 (1%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKF---VSIDELGGKVSEVVSKDLQRSDVFNLISQDSF 87
              A +++        P+ IA   F       +L  +++ V++ DL+RS +F  +   SF
Sbjct: 33  PAAALIEIDITQGQIEPMPIALPDFSPEGGDAQLARELTSVIAADLRRSGLFRPLDPASF 92

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
            +K  + ++ PRF DW ++GAQ LVTG V ++   RLR EFRLWDV   +Q++G++FF++
Sbjct: 93  IEKNLSVNTAPRFGDWRTIGAQALVTGSVTRQADGRLRAEFRLWDVFASEQMLGQQFFTT 152

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           P +WR++AH I+D IY+ +TGEKG F++RI+FV ES         L +MD+DGAN+RYLT
Sbjct: 153 PENWRRLAHIIADAIYERLTGEKGYFDTRIVFVDESGPKSKRVKRLAIMDQDGANMRYLT 212

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              D+++  PRFSP  Q++ Y ++   D   V+L++    +  + +GNF  M  APRFS 
Sbjct: 213 RG-DELVLTPRFSPTSQEITYMSFGSGDP-SVFLLNIETGQ-REIVGNFPGMTFAPRFSP 269

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+R ++S+Q+    +I+ +DL+S AT RLTNT  I+ S SYSPD  QIVFESDR G +Q
Sbjct: 270 DGQRVIMSLQQGGNANIFVMDLRSRATTRLTNTPAIDTSPSYSPDGRQIVFESDRGGSQQ 329

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           LYVM ++GS+ +RIS      Y  PVWSP+GDLIAFTK    +F IGVM+ DG  ER+L 
Sbjct: 330 LYVMNADGSNAQRISF-GPGRYSTPVWSPRGDLIAFTKQHQGRFMIGVMRPDGKGERILT 388

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           E  + + P+W+P+GR L+F R   G + G +++++DL G NE  + TPA+ASDP W   +
Sbjct: 389 EGYHNEGPSWAPNGRVLVFFRDTPGANGGPQIWTVDLTGYNEQRVTTPAFASDPSWSPLI 448

Query: 447 D 447
           D
Sbjct: 449 D 449


>gi|158422148|ref|YP_001523440.1| twin-arginine translocation pathway signal precursor [Azorhizobium
           caulinodans ORS 571]
 gi|158329037|dbj|BAF86522.1| twin-arginine translocation pathway signal precursor [Azorhizobium
           caulinodans ORS 571]
          Length = 450

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 186/415 (44%), Positives = 271/415 (65%), Gaps = 4/415 (0%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
           +  A +K+   S    P+ IA T F+   + G  +S V++ DL+RS +F  I   +F ++
Sbjct: 38  AAQAALKLEITSGTPQPIPIAVTDFIGEGDQGRAISGVITADLKRSGLFAPIDPKAFVEQ 97

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
           I+NPD  PRFQDW  + AQ LVTGRV ++G  RL+ EFRLWDV   +Q++G+++F+ P +
Sbjct: 98  ISNPDLAPRFQDWRVINAQGLVTGRVTRQGDGRLKAEFRLWDVFAGQQLMGQQYFTQPEN 157

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           WR++AH I+D IY+ +TGEKG F++RI+FV ES         L +MD+DGAN+ YLT   
Sbjct: 158 WRRVAHIIADAIYERLTGEKGYFDTRIVFVDESGAKDRRVKRLAIMDQDGANVTYLTRG- 216

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D ++  PRFSP  Q++ Y +Y   +  RV+L++    +  + +GNF  M  APRFS +G+
Sbjct: 217 DALVLTPRFSPTSQEITYMSYAQGEP-RVFLLNIETGQ-REIVGNFPGMSFAPRFSPDGQ 274

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R ++S+Q+    +I+ +DL+S AT RLT+T  I+ +  YSPD  QI FESDR G  Q+YV
Sbjct: 275 RVIMSLQQGGNANIFVMDLRSKATTRLTDTPAIDTAPCYSPDGRQICFESDRGGSSQIYV 334

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M ++GS Q+RIS    A Y  PVWSP+GD+IAFT+ +  KFAIGVM+ DG  ER+L E  
Sbjct: 335 MNADGSGQRRISF-GNARYNTPVWSPRGDVIAFTRQAEGKFAIGVMRPDGQGERVLTEGY 393

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
           + + PT++P+GR ++F R   G  G  L++ID+ G NE  + TP+Y SDP W   
Sbjct: 394 HNEGPTFAPNGRVIMFFRDPPGGGGPNLFTIDVTGYNEQRVPTPSYGSDPAWSPL 448


>gi|319406262|emb|CBI79899.1| TolB protein [Bartonella sp. AR 15-3]
          Length = 440

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 190/432 (43%), Positives = 283/432 (65%), Gaps = 5/432 (1%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
           +L  L+V +  F  +S +A +K     A+++P+ IA   F+S D LG K++ V++ DL+R
Sbjct: 10  SLFFLIVYLWFFGFSSSYAQLKGTIAKADFNPIPIAVADFLSHDSLGIKIAAVIAADLER 69

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F  + + SF +   NPD  P F DW  + AQ L+TG+V +E   RL+VEFRLWDV  
Sbjct: 70  SGLFFPLQKSSFPEISPNPDKQPNFSDWKKINAQGLITGKVYRETDGRLKVEFRLWDVVG 129

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           ++QI G++F+++   WR++AH I+D+IY  +TGEKG F++RI+F+ E+         L +
Sbjct: 130 KRQIKGQRFYTATERWRRVAHMIADEIYSKMTGEKGYFDTRIVFIDETGPHNARIKRLAM 189

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD+DGAN+ YL+   + ++  PRFSP +Q++ Y  YD      VYL    I +  + +G 
Sbjct: 190 MDQDGANLIYLSEGNE-LVLTPRFSPKRQEITYMAYDKNKTPHVYLQQMEIGQ-RELLGT 247

Query: 256 FRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           F +M +APRFS NG++ ++S +Q D + ++Y++DL++    RLT T  I+ SASYSPD +
Sbjct: 248 FDNMTIAPRFSPNGQKVIMSLLQNDGSANLYTMDLRTRQMTRLTATKAIDTSASYSPDGT 307

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +IVF SDR GK Q+Y M  +GSD +RIS + E SY  P+WSP+GD IAFTK    +F+IG
Sbjct: 308 KIVFSSDRSGKPQIYTMNVDGSDLQRISSN-EGSYSTPIWSPRGDYIAFTKQFQGQFSIG 366

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           VM  DG  ER+L    + + PTW+P+GR L+F R+  G+ GSK+Y+ID+ GRNE L+ TP
Sbjct: 367 VMHPDGKGERILTTGFHNEGPTWAPNGRVLMFFRQNPGE-GSKIYTIDITGRNERLLRTP 425

Query: 435 AYASDPQWVGFM 446
             ASDP W   +
Sbjct: 426 NDASDPAWSPLL 437


>gi|154252569|ref|YP_001413393.1| beta-propeller repeat-containing to-pal system protein TolB
           [Parvibaculum lavamentivorans DS-1]
 gi|189035985|sp|A7HV03|TOLB_PARL1 RecName: Full=Protein tolB; Flags: Precursor
 gi|154156519|gb|ABS63736.1| Tol-Pal system beta propeller repeat TolB [Parvibaculum
           lavamentivorans DS-1]
          Length = 446

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 189/443 (42%), Positives = 277/443 (62%), Gaps = 8/443 (1%)

Query: 3   LRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG 62
            R    + L  K+ L L++ +    F     A +++     N  P+ IA T FV    +G
Sbjct: 8   RRGNAVQSLMSKLILPLVMAVA---FALPARAALQIDITQGNVDPLPIAITDFVGEGSVG 64

Query: 63  GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
             +S V+S +L+RS +F  + + SF +K+++ +  PRF DW  + +Q LVTG+   E   
Sbjct: 65  ADMSAVISNNLERSGLFRPLPKASFIEKVSDINVQPRFGDWRVINSQALVTGQTRMEADG 124

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           RLRVEFRLWDV   +Q+ G +FF++P +WR++AH ISD IY+ +TGE G F++RI++VSE
Sbjct: 125 RLRVEFRLWDVLGEQQLTGLQFFTTPDNWRRVAHLISDAIYKRLTGEDGYFDTRIVYVSE 184

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +         L +MD+DG N R LT   + ++  PRFSPN Q++ Y  Y +    RVY++
Sbjct: 185 TGPKNARVKRLTIMDQDGHNPRMLTRGNE-LVLTPRFSPNSQEITYLAYRNNQP-RVYVL 242

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    +  + +G F  M  APRFS +G+R ++S+Q+    DIY++DL+S    RLTNT  
Sbjct: 243 DIETGQQ-EVVGEFPGMTFAPRFSPDGQRIIMSLQRGGNSDIYTMDLRSRQVVRLTNTAA 301

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I+ + SYSPD  QI FESDR G +Q+YVM ++GS+Q+RIS   + SY  PVWSP+GDLIA
Sbjct: 302 IDTAPSYSPDGRQITFESDRGGSQQIYVMDASGSNQRRISF-GQGSYATPVWSPRGDLIA 360

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-KKDGDTGSKLYSI 421
           FTK +G +F IGVM+ DG+ ER+L +  + + PTW+P+GR L+F R  +    G  L+S+
Sbjct: 361 FTKITGGRFVIGVMRPDGTGERVLTDGFHNEGPTWAPNGRVLMFFRETRGAQGGPSLWSV 420

Query: 422 DLNGRNETLINTPAYASDPQWVG 444
           D+ G NE    TP +ASDP W  
Sbjct: 421 DVTGYNERPSPTPTFASDPAWSP 443


>gi|90426222|ref|YP_534592.1| translocation protein TolB [Rhodopseudomonas palustris BisB18]
 gi|90108236|gb|ABD90273.1| Twin-arginine translocation pathway signal [Rhodopseudomonas
           palustris BisB18]
          Length = 450

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 191/450 (42%), Positives = 283/450 (62%), Gaps = 8/450 (1%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS--- 57
           MS R         +  L           P    A  ++     N +P+ IA   FV+   
Sbjct: 4   MSSRLPALPLSRRQALLGGAGSAAALLLPGGAQAQTRLQITEGNVAPMPIAIPNFVAGTP 63

Query: 58  -IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV 116
             +E+G  V++V++ +L+RS +F  I Q +F ++I+N D+ P+FQ W ++ AQ LVTGR+
Sbjct: 64  ADNEVGLGVAQVITNNLKRSGLFAPIDQAAFIERISNIDTPPQFQSWKTINAQALVTGRM 123

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K+G  RL+ EFRLWDV   +Q+ G+++F+SP  WR+IAH ISD IY+ +TGEKG F+SR
Sbjct: 124 TKQGDGRLKAEFRLWDVAAGQQLTGQQYFTSPEYWRRIAHIISDQIYERLTGEKGYFDSR 183

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           ++F+ E+         L +MD+DGAN+RYLT   D ++  PRFSP+ Q++ Y  +   D 
Sbjct: 184 VVFIDETGSKERRVKRLALMDQDGANVRYLTRGAD-LVLTPRFSPSTQEITYMEFGQGDP 242

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            RVYL +    +  + +GNF  M  +PRFS +G+R ++S+Q+    +++ +DL+S +T R
Sbjct: 243 -RVYLFNIETGQ-REIVGNFPGMSFSPRFSPDGQRVIMSLQQGGNSNLFVMDLRSKSTTR 300

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT+T  I+ S SY+PD S+I FESDR GK Q+YVM + G   +RIS   E SY  PVWSP
Sbjct: 301 LTDTPAIDTSPSYAPDGSKICFESDRGGKPQIYVMPAGGGGAQRISF-GEGSYSTPVWSP 359

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           +GD IAFTK  G +F+IG+MK DGS ERLL    + + PT++P+GR L+F R   G+ G 
Sbjct: 360 RGDYIAFTKQGGGQFSIGIMKPDGSGERLLTSGYHNEGPTFAPNGRVLMFFRDPGGNGGP 419

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            L+++D++GRNE  + TP +ASDP W   +
Sbjct: 420 SLFTVDISGRNEQKVPTPGFASDPAWSPLL 449


>gi|118574595|sp|Q20X63|TOLB_RHOPB RecName: Full=Protein tolB; Flags: Precursor
          Length = 447

 Score =  471 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 191/450 (42%), Positives = 283/450 (62%), Gaps = 8/450 (1%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS--- 57
           MS R         +  L           P    A  ++     N +P+ IA   FV+   
Sbjct: 1   MSSRLPALPLSRRQALLGGAGSAAALLLPGGAQAQTRLQITEGNVAPMPIAIPNFVAGTP 60

Query: 58  -IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV 116
             +E+G  V++V++ +L+RS +F  I Q +F ++I+N D+ P+FQ W ++ AQ LVTGR+
Sbjct: 61  ADNEVGLGVAQVITNNLKRSGLFAPIDQAAFIERISNIDTPPQFQSWKTINAQALVTGRM 120

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K+G  RL+ EFRLWDV   +Q+ G+++F+SP  WR+IAH ISD IY+ +TGEKG F+SR
Sbjct: 121 TKQGDGRLKAEFRLWDVAAGQQLTGQQYFTSPEYWRRIAHIISDQIYERLTGEKGYFDSR 180

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           ++F+ E+         L +MD+DGAN+RYLT   D ++  PRFSP+ Q++ Y  +   D 
Sbjct: 181 VVFIDETGSKERRVKRLALMDQDGANVRYLTRGAD-LVLTPRFSPSTQEITYMEFGQGDP 239

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            RVYL +    +  + +GNF  M  +PRFS +G+R ++S+Q+    +++ +DL+S +T R
Sbjct: 240 -RVYLFNIETGQ-REIVGNFPGMSFSPRFSPDGQRVIMSLQQGGNSNLFVMDLRSKSTTR 297

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT+T  I+ S SY+PD S+I FESDR GK Q+YVM + G   +RIS   E SY  PVWSP
Sbjct: 298 LTDTPAIDTSPSYAPDGSKICFESDRGGKPQIYVMPAGGGGAQRISF-GEGSYSTPVWSP 356

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           +GD IAFTK  G +F+IG+MK DGS ERLL    + + PT++P+GR L+F R   G+ G 
Sbjct: 357 RGDYIAFTKQGGGQFSIGIMKPDGSGERLLTSGYHNEGPTFAPNGRVLMFFRDPGGNGGP 416

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            L+++D++GRNE  + TP +ASDP W   +
Sbjct: 417 SLFTVDISGRNEQKVPTPGFASDPAWSPLL 446


>gi|86359053|ref|YP_470945.1| translocation protein TolB [Rhizobium etli CFN 42]
 gi|119371054|sp|Q2K4L8|TOLB_RHIEC RecName: Full=Protein tolB; Flags: Precursor
 gi|86283155|gb|ABC92218.1| protein transporter protein [Rhizobium etli CFN 42]
          Length = 436

 Score =  471 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 206/440 (46%), Positives = 300/440 (68%), Gaps = 10/440 (2%)

Query: 13  MKINLCLLLVLIGGF-----FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
           +K +L   L+++ G      F T  +A V++  N  N  P+ IA T F+   ++G +VS+
Sbjct: 2   VKCSLIRALMVVAGLVGAAAFTTPANALVELNINKGNIQPLPIAVTDFL-QGDMGAQVSQ 60

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V++ DLQRS +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV +E   RLR E
Sbjct: 61  VIAADLQRSGLFAPINKTAFIEKISNPDAAPRFEDWKVINAQALVTGRVTQEADGRLRAE 120

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           FRLWD    +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES    
Sbjct: 121 FRLWDTFAGQQMTGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQ 180

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  L +MD+DG N+R LT   D ++  PRFSP++Q+V Y ++ ++   RVYL+     
Sbjct: 181 QRKRQLAIMDQDGFNVRTLTDGSD-LVLTPRFSPSRQEVTYMSFANQQP-RVYLLQLETG 238

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  + +GNF  M  +PRFS +G++ ++S+Q++   +IY++DL+S  T RLT+T  I+ S 
Sbjct: 239 Q-REVVGNFPGMTFSPRFSPDGQKVIMSLQQEGNSNIYTMDLRSRTTTRLTSTAAIDTSP 297

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SYSPD +++ FESDR GK Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK S
Sbjct: 298 SYSPDGARVSFESDRGGKPQIYVMNADGSGQTRISF-GDGSYSTPVWSPRGDLIAFTKQS 356

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G KF+IGVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G N
Sbjct: 357 GGKFSIGVMKPDGSGERILTSGFHNEGPTWAPNGRVLMFFRQAAGAGGPQLYSIDLTGYN 416

Query: 428 ETLINTPAYASDPQWVGFMD 447
           E L+ TP+YASDP W   ++
Sbjct: 417 EQLVKTPSYASDPAWSPLLE 436


>gi|319781027|ref|YP_004140503.1| Tol-Pal system beta propeller repeat protein TolB [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|317166915|gb|ADV10453.1| Tol-Pal system beta propeller repeat protein TolB [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 436

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 194/418 (46%), Positives = 277/418 (66%), Gaps = 7/418 (1%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
              A V++  N  N  P+ IA T F   D LG ++S++V+ DL+RS +F  I + +F +K
Sbjct: 25  PALALVELNVNKGNVEPLPIAITDFQGGDALGAQISQIVTADLKRSGLFAPIDKSAFIEK 84

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
           ITNPD+ PRF DW  + AQ LVTG V KE   R+R ++RLWD    +Q+ G++FF++ A+
Sbjct: 85  ITNPDAAPRFDDWKVINAQALVTGSVSKEADGRIRAQYRLWDTFAGQQMAGEQFFANDAN 144

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R++AH I+D IY+ +TGEKG F++R++F+ ES      K  L +MD+DGAN+RYL+  R
Sbjct: 145 QRRVAHIIADAIYERLTGEKGYFDTRVVFIDESGAKNARKKRLAIMDQDGANVRYLSDGR 204

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             I+  PRFSPN+Q++ Y +Y+     RVYL+     +  + +GNF  M  APRFS +G+
Sbjct: 205 S-IVLTPRFSPNRQEITYMSYESGQP-RVYLLQIETGQ-RELVGNFPGMTFAPRFSPDGQ 261

Query: 271 RALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           + ++S ++ D   +I+++DL+S +T RLTN+  I+ S SYSPD S++VF SDR G+ Q+Y
Sbjct: 262 KVIMSLLRDDGNSNIFAMDLRSRSTTRLTNSTAIDTSPSYSPDGSKVVFTSDRGGRAQIY 321

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           VM ++GS Q RIS   +  Y  PVWSP+GDLIAFTK +G +F IGVMK DGS ER+L   
Sbjct: 322 VMGADGSGQTRISF-GDGVYSTPVWSPRGDLIAFTKQTGGEFQIGVMKTDGSGERILSSG 380

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
              + PTW+P+GR L+F R   G  G KL S+DL GRNE  I T  +ASDP W   ++
Sbjct: 381 FQQEGPTWAPNGRVLMFFRDSAG--GPKLVSVDLTGRNEQSIPTANFASDPAWSPLLE 436


>gi|260467065|ref|ZP_05813245.1| Tol-Pal system beta propeller repeat protein TolB [Mesorhizobium
           opportunistum WSM2075]
 gi|259029174|gb|EEW30470.1| Tol-Pal system beta propeller repeat protein TolB [Mesorhizobium
           opportunistum WSM2075]
          Length = 436

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 192/421 (45%), Positives = 278/421 (66%), Gaps = 7/421 (1%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSF 87
                 A V++  N  N  P+ IA T F   D LG ++S++++ DL+RS +F  I + +F
Sbjct: 22  STLPALALVELNVNKGNVEPLPIAITDFQGGDALGAQISQIITADLKRSGLFAPIDKSAF 81

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
            +KI+NPD+ PRF DW  + AQ LVTG V KE   R+R ++RLWD    +Q+ G++FF++
Sbjct: 82  IEKISNPDAAPRFDDWKVINAQALVTGSVSKEADGRIRAQYRLWDTFAGQQMSGEQFFAN 141

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
            A+ R++AH I+D IY+ +TGEKG F++R++F+ ES      K  L +MD+DGAN+RYL+
Sbjct: 142 DANQRRVAHIIADAIYERLTGEKGYFDTRVVFIDESGAKNARKKRLAIMDQDGANVRYLS 201

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
             R  I+  PRFSPN+Q++ Y +Y+     RVYL+     +  + +GNF  M  APRFS 
Sbjct: 202 DGRS-IVLTPRFSPNRQEITYMSYESGQP-RVYLLQIETGQ-RELVGNFPGMTFAPRFSP 258

Query: 268 NGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +G++ ++S ++ D   +I+++DL+S +T RLTN+  I+ S SYSPD S++VF SDR G+ 
Sbjct: 259 DGQKVIMSLLRDDGNSNIFAMDLRSRSTTRLTNSTAIDTSPSYSPDGSKVVFTSDRGGRA 318

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Q+YVM ++GS Q RIS   +  Y  PVWSP+GDLIAFTK +G +F IGVMK DGS ER+L
Sbjct: 319 QIYVMGADGSGQTRISF-GDGVYSTPVWSPRGDLIAFTKQTGGEFQIGVMKTDGSGERIL 377

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                 + PTW+P+GR L+F R  +G  G KL S+DL GRNE  I T  +ASDP W   +
Sbjct: 378 SSGFQQEGPTWAPNGRVLMFFRDANG--GPKLISVDLTGRNEQPIPTSNFASDPAWSPLL 435

Query: 447 D 447
           +
Sbjct: 436 E 436


>gi|319899382|ref|YP_004159479.1| TolB protein [Bartonella clarridgeiae 73]
 gi|319403350|emb|CBI76909.1| TolB protein [Bartonella clarridgeiae 73]
          Length = 440

 Score =  469 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 187/433 (43%), Positives = 280/433 (64%), Gaps = 7/433 (1%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
              ++ +   GF  +S +A +K    +A+++P+ IA   FVS D LG K++ VV+ DL+R
Sbjct: 12  FFFIVYLWFCGF--SSAYAQLKGTIANADFNPIPIAIADFVSHDSLGVKIAAVVAADLER 69

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F  + + SF +   NPD  P F DW  +  Q LVTG+V +E   RL+V+FRLWDV  
Sbjct: 70  SGLFLPLQKSSFPEISPNPDKQPNFSDWKKINTQGLVTGKVYREADGRLKVDFRLWDVLG 129

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            +QI G++F+++   WR++AH ISD+IY  +TGEKG F++RI+F+ E+         L +
Sbjct: 130 NRQIKGQRFYTATERWRRVAHMISDEIYSKMTGEKGYFDTRIVFIDETGPHDARIKRLTI 189

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD+DGAN+ YL+   + ++  PRFSP +Q++ Y  Y       VYL    + +  + IG 
Sbjct: 190 MDQDGANLTYLSDGSE-LVLTPRFSPKRQEITYMAYGKNKTPHVYLQQMEVGQ-RELIGT 247

Query: 256 FRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           F +M +APRFS +G++ ++S +Q + + ++Y++DL++    RLT T  I+ SASYSPD +
Sbjct: 248 FDNMTIAPRFSPDGQKVIMSLLQNNGSANLYTMDLRTRKMTRLTTTKAIDTSASYSPDGN 307

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +IVF SDR+GK Q+Y M  +GSD +RIS + E SY  P+WSP+GD IAFTK    +F+IG
Sbjct: 308 KIVFSSDRDGKPQIYTMNVDGSDLQRISSN-EGSYSTPIWSPRGDYIAFTKQFQGQFSIG 366

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           VM  DG  ER+L    + + PTW+P+GR L+F RK  G  G+K+Y+ID+ GRNE L+ TP
Sbjct: 367 VMYPDGKGERILTTGFHNEGPTWAPNGRVLMFFRKNPG-AGAKIYTIDITGRNERLLPTP 425

Query: 435 AYASDPQWVGFMD 447
             ASDP W   ++
Sbjct: 426 NDASDPAWSPLLN 438


>gi|307944545|ref|ZP_07659885.1| Tol-Pal system beta propeller repeat protein TolB [Roseibium sp.
           TrichSKD4]
 gi|307772294|gb|EFO31515.1| Tol-Pal system beta propeller repeat protein TolB [Roseibium sp.
           TrichSKD4]
          Length = 449

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 189/436 (43%), Positives = 270/436 (61%), Gaps = 10/436 (2%)

Query: 18  CLLLVLIGGFFPT--SIHAFVKVATNSANYSPVSIAFTKFVSIDE---LGGKVSEVVSKD 72
           CL+LV   G         A +++     N  P+ IA   F +      L   +  V++ D
Sbjct: 18  CLMLVAFAGLLTALGPARALIELDITQGNIEPLPIALPDFAAAGSDPKLASDMIGVITAD 77

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+RS +F  +   SF QK  + ++ PRF DW ++GAQ LV+G V K+   RLR EFRLWD
Sbjct: 78  LKRSGLFKPLDPASFIQKNMDVNTTPRFGDWRTIGAQALVSGTVSKQADGRLRAEFRLWD 137

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V   +Q++G++FF++  +WR++AH I+D IY+ +TGEKG F++RI+++ E+         
Sbjct: 138 VFASEQMLGQQFFTTEENWRRLAHIIADAIYERLTGEKGYFDTRIVYIDETGPKDKRVKR 197

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L +MD+DGAN+RYLT   D ++  PRFSP  Q++ Y +Y   D   VYL++    +  + 
Sbjct: 198 LAIMDQDGANVRYLTKG-DDLVLTPRFSPTSQEITYMSYSGADP-SVYLLNIETGQ-REI 254

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +GNF  M  APRFS +G+  ++S+Q+    +I+ +DL+S  T RLTNT  I+ S SYSPD
Sbjct: 255 VGNFPGMTFAPRFSPDGQSVVMSLQQGGNANIFKMDLRSRRTTRLTNTAAIDTSPSYSPD 314

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            S+IVFESDR G +QLYVM  N  +  RIS      Y  PVWSP+GDLIAFTK    +F 
Sbjct: 315 GSRIVFESDRGGTQQLYVMSGNDGNPLRISF-GPGRYSTPVWSPRGDLIAFTKMHQGRFM 373

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLI 431
           IGVMK DG  ER+L E  + + P WSP+GR L+F R   G + G +++++DL G NE  +
Sbjct: 374 IGVMKPDGKGERILTEGYHNEGPAWSPNGRVLVFFRDTPGANGGPQVWTVDLTGYNEQRV 433

Query: 432 NTPAYASDPQWVGFMD 447
           NTPA+ASDP W   +D
Sbjct: 434 NTPAFASDPSWSPLID 449


>gi|190893275|ref|YP_001979817.1| protein transporter uptake component protein [Rhizobium etli CIAT
           652]
 gi|226705888|sp|B3PYX5|TOLB_RHIE6 RecName: Full=Protein tolB; Flags: Precursor
 gi|190698554|gb|ACE92639.1| protein transporter, uptake component protein [Rhizobium etli CIAT
           652]
          Length = 436

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 200/441 (45%), Positives = 294/441 (66%), Gaps = 5/441 (1%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           + +    +  L  + ++      T  +A V +     N  P+ IA T F+   ++G +VS
Sbjct: 1   MMKCSFFRAILVAVGLMAAAVVATPANALVTLDIRKGNVQPMPIAITDFL-QGDMGAQVS 59

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           +V++ DLQRS +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV +E   RLR 
Sbjct: 60  QVIAADLQRSGLFAPINKSAFIEKISNPDASPRFEDWKVINAQALVTGRVTQEADGRLRA 119

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           EFRLWD    +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES   
Sbjct: 120 EFRLWDPFAGQQMTGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTK 179

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              K  L +MD+DG N+R LT   D ++  PRFSPN+Q+V Y ++ ++   RVYL+    
Sbjct: 180 QQRKRQLAIMDQDGFNVRMLTDGSD-LVLTPRFSPNRQEVTYMSFANQQP-RVYLLQLET 237

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +  + +GNF  M  +PRFS +G++ ++S+Q++   +IY++DL+S  T RLT+T  I+ S
Sbjct: 238 GQ-REVVGNFPGMTFSPRFSPDGQKVIMSLQQEGNSNIYTMDLRSRTTTRLTSTAAIDTS 296

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            SYSPD +++ FESDR GK Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK 
Sbjct: 297 PSYSPDGARVSFESDRGGKPQIYVMNADGSGQTRISF-GDGSYSTPVWSPRGDLIAFTKQ 355

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +G KF+IGVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G 
Sbjct: 356 AGGKFSIGVMKPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQAAGAGGPQLYSIDLTGY 415

Query: 427 NETLINTPAYASDPQWVGFMD 447
           NE L+ TP+Y SDP W   ++
Sbjct: 416 NEQLVKTPSYGSDPAWSPLLE 436


>gi|218510315|ref|ZP_03508193.1| translocation protein TolB [Rhizobium etli Brasil 5]
          Length = 436

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 200/441 (45%), Positives = 294/441 (66%), Gaps = 5/441 (1%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           + +    +  L  + ++      T  +A V +     N  P+ IA T F+   ++G +VS
Sbjct: 1   MMKCSFFRAILVAVGLMAAAVVATPANALVTLDIRKGNVQPMPIAVTDFL-QGDMGAQVS 59

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           +V++ DLQRS +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV +E   RLR 
Sbjct: 60  QVIAADLQRSGLFAPINKSAFIEKISNPDASPRFEDWKVINAQALVTGRVTQEADGRLRA 119

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           EFRLWD    +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES   
Sbjct: 120 EFRLWDPFAGQQMTGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTK 179

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              K  L +MD+DG N+R LT   D ++  PRFSPN+Q+V Y ++ ++   RVYL+    
Sbjct: 180 QQRKRQLAIMDQDGFNVRMLTDGSD-LVLTPRFSPNRQEVTYMSFANQQP-RVYLLQLET 237

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +  + +GNF  M  +PRFS +G++ ++S+Q++   +IY++DL+S  T RLT+T  I+ S
Sbjct: 238 GQ-REVVGNFPGMTFSPRFSPDGQKVIMSLQQEGNSNIYTMDLRSRTTTRLTSTAAIDTS 296

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            SYSPD +++ FESDR GK Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK 
Sbjct: 297 PSYSPDGARVSFESDRGGKPQIYVMNADGSGQTRISF-GDGSYSTPVWSPRGDLIAFTKQ 355

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +G KF+IGVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G 
Sbjct: 356 AGGKFSIGVMKPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQAAGAGGPQLYSIDLTGY 415

Query: 427 NETLINTPAYASDPQWVGFMD 447
           NE L+ TP+Y SDP W   ++
Sbjct: 416 NEQLVKTPSYGSDPAWSPLLE 436


>gi|327193466|gb|EGE60362.1| translocation protein TolB [Rhizobium etli CNPAF512]
          Length = 443

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 206/448 (45%), Positives = 299/448 (66%), Gaps = 6/448 (1%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGF-FPTSIHAFVKVATNSANYSPVSIAFTKFVSID 59
           M    F   + ++   L ++  LIG   F T  +A V +     N  P+ IA T F+   
Sbjct: 1   MLKGLFDMVKCSLIRALMVIAGLIGAAAFTTPANALVTLDLRKGNVQPMPIAVTDFL-QG 59

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
           ++G +VS+V++ DLQRS +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV +E
Sbjct: 60  DMGAQVSQVIAADLQRSGLFAPINKSAFIEKISNPDASPRFEDWKVINAQALVTGRVTQE 119

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
              RLR EFRLWD    +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++F
Sbjct: 120 ADGRLRAEFRLWDPFAGQQMTGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVF 179

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           VSES      K  L +MD+DG N+R LT   D ++  PRFSPN+Q+V Y ++ ++   RV
Sbjct: 180 VSESGTKQQRKRQLAIMDQDGFNVRMLTDGSD-LVLTPRFSPNRQEVTYMSFANQQP-RV 237

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           YL+     +  + +GNF  M  +PRFS +G++ ++S+Q++   +IY++DL+S  T RLT+
Sbjct: 238 YLLQLETGQ-REVVGNFPGMTFSPRFSPDGQKVIMSLQQEGNSNIYTMDLRSRTTTRLTS 296

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T  I+ S SYSPD +++ FESDR GK Q+YVM ++GS Q RIS   + SY  PVWSP+GD
Sbjct: 297 TAAIDTSPSYSPDGARVSFESDRGGKPQIYVMNADGSGQTRISF-GDGSYSTPVWSPRGD 355

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           LIAFTK +G KF+IGVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LY
Sbjct: 356 LIAFTKQAGGKFSIGVMKPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQAAGAGGPQLY 415

Query: 420 SIDLNGRNETLINTPAYASDPQWVGFMD 447
           SIDL G NE L+ TP+Y SDP W   ++
Sbjct: 416 SIDLTGYNEQLVKTPSYGSDPAWSPLLE 443


>gi|85714380|ref|ZP_01045368.1| TolB [Nitrobacter sp. Nb-311A]
 gi|85698827|gb|EAQ36696.1| TolB [Nitrobacter sp. Nb-311A]
          Length = 441

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 190/444 (42%), Positives = 280/444 (63%), Gaps = 8/444 (1%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----IDELG 62
           +   LN +     +                +V     N +P+ IA   FV      +E+G
Sbjct: 1   MPFRLNRRHMFFGMASAAVLLRGRQALGQARVQITEGNVAPLPIAIPNFVGGSASDNEVG 60

Query: 63  GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
             V++V++ +L+RS +F  I Q ++ +KITN D  P+F +W ++ AQ LVTGR+ ++G  
Sbjct: 61  AGVAKVITNNLKRSGLFAPIDQAAYIEKITNIDVPPQFANWKTINAQALVTGRMTRQGDG 120

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           RL+ EFRLWDV   +Q+ G+++F+SP  WR+IAH ISD IY+ +TGEKG F+SR++FV E
Sbjct: 121 RLKAEFRLWDVATGQQLAGQQYFTSPEYWRRIAHIISDQIYERLTGEKGYFDSRVVFVDE 180

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S  S      L +MD+DGAN+RYLT   D ++  PRFSP+ Q++ Y  +   D  RVYL 
Sbjct: 181 SGPSQHRVKRLALMDQDGANVRYLTRGAD-LVITPRFSPSTQEITYMEFGQGDP-RVYLF 238

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +    +  + +GNF  M  APRF+ +G+R ++S+Q+    +++ +DL+S +T RLT+T  
Sbjct: 239 NIETGQ-REIVGNFPGMSFAPRFAPDGQRIIMSLQQGGNSNLFVMDLRSKSTTRLTDTPA 297

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I+ S SYSPD ++I FESDR GK Q+YVM ++G   +RIS   E SY  PVWSP+GD IA
Sbjct: 298 IDTSPSYSPDGARICFESDRGGKPQIYVMGASGGGAQRISF-GEGSYSTPVWSPRGDYIA 356

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           FTK  G +F+IG++K DGS ER+L    + + PT++P+GR L+F R   G  G  LY+ID
Sbjct: 357 FTKQGGGQFSIGIIKPDGSGERILTSGFHNEGPTFAPNGRVLMFFRDPGGAGGPSLYTID 416

Query: 423 LNGRNETLINTPAYASDPQWVGFM 446
           ++GRNE  + TP +ASDP W   +
Sbjct: 417 VSGRNELKVPTPGFASDPAWSPLL 440


>gi|254501514|ref|ZP_05113665.1| Tol-Pal system beta propeller repeat protein TolB [Labrenzia
           alexandrii DFL-11]
 gi|222437585|gb|EEE44264.1| Tol-Pal system beta propeller repeat protein TolB [Labrenzia
           alexandrii DFL-11]
          Length = 449

 Score =  468 bits (1204), Expect = e-129,   Method: Composition-based stats.
 Identities = 189/453 (41%), Positives = 278/453 (61%), Gaps = 12/453 (2%)

Query: 3   LRFFIAEELNMKINLCL----LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--- 55
           +R    + L +  +        + L     P  + A V++     N  P+ IA  +F   
Sbjct: 1   MRQIWKQFLGIVGSSARVRGGFVFLFAALTPLPVAALVEIDITQGNVEPLPIALPQFSAE 60

Query: 56  VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR 115
               +L   ++ V++ DL+RS +FN +   SF QK  + +S PRF DW ++ AQ LVTG 
Sbjct: 61  GGDSKLAADMTAVIAADLKRSGLFNPLDPASFIQKNMSVNSTPRFGDWRTISAQALVTGT 120

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V K+   RLR EFRLWDV   +Q++G++F+++P +WR++AH I+D +Y+ ITGEKG F++
Sbjct: 121 VTKQADGRLRAEFRLWDVFAAEQMLGQQFYTTPENWRRLAHIIADAVYERITGEKGYFDT 180

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI+FV E+         L +MD+DGAN+RYLT   D ++  PRFSP  Q++ Y +Y   D
Sbjct: 181 RIVFVDETGPKDKRVKRLALMDQDGANVRYLTRG-DDLVLTPRFSPTSQEITYMSYAGAD 239

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              VYL++    +  + +GNF  M  APRFS +G+  ++S+Q+    +I+ +DL+S  T 
Sbjct: 240 P-SVYLLNIETGQ-REIVGNFPGMTFAPRFSPDGQSVVMSLQQGSNANIFKMDLRSRQTT 297

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           RLTN+  I+ S S+SPDS +IVFESDR G +QLYVM ++G   +RIS      Y  PVWS
Sbjct: 298 RLTNSAAIDTSPSFSPDSQRIVFESDRGGSQQLYVMSASGGQAQRISF-GPGRYSTPVWS 356

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DT 414
           P+GDLIAFTK    +F IGVM+ DG  ER+L E  + + P WSP+GR L+F R   G + 
Sbjct: 357 PRGDLIAFTKQHQGRFMIGVMRPDGKGERVLTEGYHNEGPAWSPNGRVLVFFRDTPGANG 416

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           G +++++DL G NE  + TPA+ASDP W   +D
Sbjct: 417 GPQVWTVDLTGYNEQRLETPAFASDPSWSPLID 449


>gi|222086973|ref|YP_002545507.1| Tol-Pal system beta propeller repeat protein TolB [Agrobacterium
           radiobacter K84]
 gi|221724421|gb|ACM27577.1| Tol-Pal system beta propeller repeat protein TolB [Agrobacterium
           radiobacter K84]
          Length = 441

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 205/420 (48%), Positives = 294/420 (70%), Gaps = 5/420 (1%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSF 87
           + +  +A V++  N  N  P+ IA T  +S D LG ++S V++ DLQRS +F  I++ +F
Sbjct: 27  YASPAYAVVEININKGNVQPMPIAITDLLSNDGLGAQISGVIAADLQRSGLFAPINKQAF 86

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
            +KI+NPDS PRF DW S+ AQ LVTGRV ++G  RLR EFRLWD     Q+IG++F++ 
Sbjct: 87  IEKISNPDSTPRFPDWTSINAQALVTGRVTQDG-GRLRAEFRLWDTFGNSQMIGQQFYAQ 145

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           P +WR++AH I+D IY+ ITGEKG F++R++FV+ES      K  L +MD+DGAN+R LT
Sbjct: 146 PDNWRRVAHIIADAIYEKITGEKGYFDTRVVFVAESGPKTARKTQLAIMDQDGANVRMLT 205

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              D ++  PRFSP++Q+V Y ++ ++   RVYL+  +  +  + +GNF  M  +PRFS 
Sbjct: 206 NGSD-LVLTPRFSPSRQEVTYMSFANQQP-RVYLLQLQTGQ-REIVGNFPGMTFSPRFSP 262

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+R ++S+Q++   +IY++DL+S  T RLT+T  I+ S SYSPD +Q+ FESDR GK+Q
Sbjct: 263 DGQRVIMSLQQEGNANIYTMDLRSRTTTRLTSTAAIDTSPSYSPDGTQVAFESDRGGKQQ 322

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +YVM ++GS+Q+RIS   + SY  PVWSP+GDLIAFTK SG  F+IGVMK DGS ERLL 
Sbjct: 323 IYVMNADGSNQRRISF-GDGSYSTPVWSPRGDLIAFTKQSGGSFSIGVMKTDGSGERLLT 381

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
              + + PTW+P+GR ++F R+  G +G +LYSIDL G NE  I TP +ASDP W   ++
Sbjct: 382 TGFHNEGPTWAPNGRVIMFFREPAGSSGPQLYSIDLTGYNEQKIPTPGFASDPAWSPLLE 441


>gi|75676901|ref|YP_319322.1| translocation protein TolB [Nitrobacter winogradskyi Nb-255]
 gi|118574589|sp|Q3SP21|TOLB_NITWN RecName: Full=Protein tolB; Flags: Precursor
 gi|74421771|gb|ABA05970.1| TolB [Nitrobacter winogradskyi Nb-255]
          Length = 450

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 190/445 (42%), Positives = 280/445 (62%), Gaps = 8/445 (1%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----IDEL 61
            +   LN +  +  +                +V     N +P+ IA   FV      +E+
Sbjct: 9   RMPFRLNRRHMISGMASAAVLLGSRQALGQARVQITEGNVAPLPIAIPNFVGGTPSDNEV 68

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  V++V++ +L+RS +F  I Q ++ +KITN D  P+F +W ++ AQ LVTGR+ ++G 
Sbjct: 69  GAGVAKVITNNLKRSGLFAPIDQAAYIEKITNIDVPPQFANWKTINAQALVTGRMTRQGD 128

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL+ EFRLWDV   +Q+ G+++F+SP  WR+IAH ISD IY+ +TGEKG F+SR++FV 
Sbjct: 129 GRLKAEFRLWDVATGQQLAGQQYFTSPEYWRRIAHIISDQIYERLTGEKGYFDSRVVFVD 188

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES  S      L +MD+DGAN+RYLT   D ++  PRFSP+ Q+V Y  +   D  RVYL
Sbjct: 189 ESGSSQRRVKRLALMDQDGANVRYLTRGAD-LVITPRFSPSTQEVTYMEFGQGDP-RVYL 246

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +    +  + +GNF  M  +PRF+ +G+R ++S+Q+    +++ +DL+S +T RLT+T 
Sbjct: 247 FNIETGQ-REIVGNFPGMSFSPRFAPDGQRIIMSLQQGGNSNLFVMDLRSKSTTRLTDTP 305

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I+ S SYSPD ++I FESDR GK Q+YVM + G   +RIS   E SY  PVWSP+GD I
Sbjct: 306 AIDTSPSYSPDGARICFESDRGGKPQIYVMGATGGGAQRISF-GEGSYSTPVWSPRGDYI 364

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           AFTK  G +F+IG++K DGS ER+L    + + PT++P+GR L+F R   G  G  LY+I
Sbjct: 365 AFTKQGGGQFSIGIIKPDGSGERILTSGFHNEGPTFAPNGRVLMFFRDPGGGGGPSLYTI 424

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D++GRNE  + TP +ASDP W   +
Sbjct: 425 DVSGRNELKVPTPGFASDPAWSPLL 449


>gi|319407739|emb|CBI81386.1| TolB protein [Bartonella sp. 1-1C]
          Length = 440

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 188/442 (42%), Positives = 286/442 (64%), Gaps = 7/442 (1%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           + + +   +    + +   GF  +S +A +K     A+++P+ IA   FVS D LG K++
Sbjct: 3   VIKRIISSLFFFSVYLWFSGF--SSSYAQLKGTIAKADFNPIPIAVADFVSHDSLGIKIA 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV+ DL+RS +F  + + SF +   NPD  P F DW  + AQ LVTG++ +E   RL+V
Sbjct: 61  AVVAADLERSGLFFPLQKSSFPETTPNPDQQPNFPDWKKINAQGLVTGKIYRETDGRLKV 120

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +FRLWDV  ++QI G++F+++   WR++AH I+D+IY  +TGEKG F++RI+F+ E+   
Sbjct: 121 DFRLWDVAGKRQIKGQRFYTATERWRRVAHMIADEIYSQMTGEKGYFDTRIVFIDETGPQ 180

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L +MD+DGAN+ YL+   + ++  PRFSP +Q++ Y  Y       VYL    +
Sbjct: 181 NARIKRLAIMDQDGANLIYLSDGSE-LVLTPRFSPKRQEITYMAYGKNKTPHVYLQQMEV 239

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +  + IG+F +M +APRFS NG++ ++S +Q D + ++Y++DL++    RLT T  I+ 
Sbjct: 240 GQ-RELIGSFDNMTIAPRFSPNGQKVIMSLLQNDGSANLYTMDLRTRKMTRLTATQAIDT 298

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           SASYSPD ++IVF SDR GK+Q+Y M  +GSD +RIS + E SY  P+WSP+GD IAFTK
Sbjct: 299 SASYSPDGTKIVFASDRNGKQQIYTMNIDGSDLQRISSN-EGSYSTPIWSPRGDYIAFTK 357

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               +F+IGVM  DG  ER+L    + + PTW+P+GR L+F R+  G+ GSK+Y+ID+ G
Sbjct: 358 QFQGQFSIGVMHPDGKGERILTTGFHNEGPTWAPNGRVLMFFRQNPGE-GSKIYTIDITG 416

Query: 426 RNETLINTPAYASDPQWVGFMD 447
           RNE L+ TP  ASDP W   ++
Sbjct: 417 RNERLLPTPNDASDPAWSPLLN 438


>gi|91978608|ref|YP_571267.1| translocation protein TolB [Rhodopseudomonas palustris BisB5]
 gi|91685064|gb|ABE41366.1| Twin-arginine translocation pathway signal [Rhodopseudomonas
           palustris BisB5]
          Length = 449

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 189/419 (45%), Positives = 276/419 (65%), Gaps = 8/419 (1%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSF 87
                +V     N +P+ IA   FV    S +E+GG VS+V++ +L+RS +F  I Q ++
Sbjct: 34  AFGQARVQITEGNVAPLPIAIPNFVAGTPSDNEVGGGVSQVITNNLKRSGLFAPIDQAAY 93

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
            +KITN D  P+F+ W S+ AQ LVTGR+ ++   RL+ EFRLWDV   +Q+ G+++F+S
Sbjct: 94  LEKITNIDVPPQFKSWTSINAQALVTGRMTRQPDGRLKAEFRLWDVATGQQLAGQQYFTS 153

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           P  WR+IAH ISD IY+ +TGEKG F+SR++F+ ES  +      L +MD+DGAN+RYLT
Sbjct: 154 PEYWRRIAHIISDQIYERLTGEKGYFDSRVVFIDESGPADRRVKRLALMDQDGANVRYLT 213

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              D ++  PRFSP+ Q++ Y  +   D  +VYL +    +  + +GNF  M  APRFS 
Sbjct: 214 RGSD-LVLTPRFSPSTQEITYMEFGQGDP-KVYLFNIETGQ-REIVGNFPGMSFAPRFSP 270

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+R ++S+Q+    +++ +DL+S  T RLT+T  I+ S SYSPD+++I FESDR GK Q
Sbjct: 271 DGQRIIMSLQQGGNSNLFVMDLRSKTTTRLTDTPAIDTSPSYSPDAARICFESDRGGKPQ 330

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y+M + G   +RIS   + SY  PVWSP+GD IAFTK  G +FAIG+MK DGS ER+L 
Sbjct: 331 IYIMPAGGGQAQRISF-GDGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKPDGSGERILT 389

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
              + + PT++P+GR L+F R   G+ G  LY++D++GRNE  + TP YASDP W   +
Sbjct: 390 SGFHNEGPTFAPNGRVLMFFRDPGGNAGPSLYTVDVSGRNELRVPTPGYASDPAWSPLL 448


>gi|241206184|ref|YP_002977280.1| translocation protein TolB [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860074|gb|ACS57741.1| Tol-Pal system beta propeller repeat protein TolB [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 435

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 203/434 (46%), Positives = 291/434 (67%), Gaps = 6/434 (1%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
           +  L  + ++    F T  +A V +     N  P+ IA T F    ++G +VS+V++ DL
Sbjct: 8   RAILVAVGLMTAAVFATPANALVTLDIRKGNVQPMPIAVTDFQG--DMGAQVSQVIAADL 65

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
           QRS +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV KE   RLR EFRLWD 
Sbjct: 66  QRSGLFAPINKTAFIEKISNPDASPRFEDWKVINAQALVTGRVTKEADGRLRAEFRLWDP 125

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
              +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES      K  L
Sbjct: 126 FAGQQMTGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQQRKRQL 185

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD+DG N+R LT   D ++  PRFSP++Q+V Y ++ ++   RVYL+     +  + +
Sbjct: 186 AIMDQDGFNVRMLTDGSD-LVLTPRFSPSRQEVTYMSFANQQP-RVYLLQLETGQ-REVV 242

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           GNF  M  +PRFS +G++ ++S+Q+D   +IY++DL+S  T RLT+T  I+ S SYSPD 
Sbjct: 243 GNFPGMTFSPRFSPDGQKVIMSLQQDANSNIYTMDLRSRTTTRLTSTAAIDTSPSYSPDG 302

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +++ FESDR GK Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK +G KF+I
Sbjct: 303 ARVSFESDRGGKPQIYVMNADGSGQTRISF-GDGSYSTPVWSPRGDLIAFTKQAGGKFSI 361

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           GVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE L+ T
Sbjct: 362 GVMKPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQAAGSGGPQLYSIDLTGYNEQLVKT 421

Query: 434 PAYASDPQWVGFMD 447
           P Y SDP W   M+
Sbjct: 422 PTYGSDPAWSPLME 435


>gi|319404775|emb|CBI78376.1| TolB protein [Bartonella rochalimae ATCC BAA-1498]
          Length = 440

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 188/442 (42%), Positives = 284/442 (64%), Gaps = 7/442 (1%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           + + +   +    + +   GF  +S +A +K     A+++P+ IA   FVS D LG K++
Sbjct: 3   VIKRIISSLFFFSVYLWFSGF--SSSYAQLKGTIAKADFNPIPIAVADFVSHDSLGIKIA 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV+ DL+RS +F  + + SF +   NPD  P F DW  + AQ LVTG++ +E   RL+V
Sbjct: 61  AVVAADLERSGLFFPLQKSSFPEITPNPDQQPNFPDWKKINAQGLVTGKIYRETDGRLKV 120

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +FRLWDV  ++QI G++F+++   WR++AH I+D+IY  +TGEKG F++RI+F+ E+   
Sbjct: 121 DFRLWDVAGKRQIKGQRFYTATERWRRVAHMIADEIYSQMTGEKGYFDTRIVFIDETGPQ 180

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L +MD+DGAN+ YL+   + I   PRFSP +Q++ Y  Y       VYL    +
Sbjct: 181 NARIKRLAIMDQDGANLIYLSDGSELI-LTPRFSPKRQEITYMAYGKNKTPHVYLQQMEV 239

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +  + IG+F +M +APRFS NG++ ++S +Q + + ++Y++DL++    RLT T  I+ 
Sbjct: 240 GQ-RELIGSFDNMTIAPRFSPNGQKVIMSLLQNNGSANLYTMDLRTRKMTRLTATQAIDT 298

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           SASYSPD ++IVF SDR GK Q+Y M  +GSD +RIS + E SY  P+WSP+GD IAFTK
Sbjct: 299 SASYSPDGTKIVFSSDRNGKPQIYTMNVDGSDLQRISSN-EGSYSTPIWSPRGDYIAFTK 357

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               +F+IGVM  DG  ER+L    + + PTW+P+GR L+F R+  G+ GSK+Y+ID+ G
Sbjct: 358 QFQGQFSIGVMHPDGKGERILTTGFHNEGPTWAPNGRVLMFFRQNPGE-GSKIYTIDITG 416

Query: 426 RNETLINTPAYASDPQWVGFMD 447
           RNE L+ TP  ASDP W   ++
Sbjct: 417 RNERLLPTPNDASDPAWSPLLN 438


>gi|116253709|ref|YP_769547.1| translocation protein TolB [Rhizobium leguminosarum bv. viciae
           3841]
 gi|119371055|sp|Q1MC72|TOLB_RHIL3 RecName: Full=Protein tolB; Flags: Precursor
 gi|115258357|emb|CAK09459.1| putative TolB family protein uptake component [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 435

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 203/434 (46%), Positives = 291/434 (67%), Gaps = 6/434 (1%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
           +  L  + ++    F T  +A V +     N  P+ IA T F    ++G +VS+V++ DL
Sbjct: 8   RAILVAVGLMTAAVFATPANALVTLDIRKGNVQPMPIAVTDFQG--DIGAQVSQVIAADL 65

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
           QRS +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV KE   RLR EFRLWD 
Sbjct: 66  QRSGLFAPINKTAFIEKISNPDAAPRFEDWKVINAQALVTGRVSKEADGRLRAEFRLWDP 125

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
              +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES      K  L
Sbjct: 126 FAGQQMTGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQQRKRQL 185

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD+DG N+R LT   D ++  PRFSP++Q+V Y ++ ++   RVYL+     +  + +
Sbjct: 186 AIMDQDGFNVRMLTDGSD-LVLTPRFSPSRQEVTYMSFANQQP-RVYLLQLETGQ-REVV 242

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           GNF  M  +PRFS +G++ ++S+Q+D   +IY++DL+S  T RLT+T  I+ S SYSPD 
Sbjct: 243 GNFPGMTFSPRFSPDGQKVIMSLQQDANSNIYTMDLRSRTTTRLTSTAAIDTSPSYSPDG 302

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +++ FESDR GK Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK +G KF+I
Sbjct: 303 ARVSFESDRGGKPQIYVMNADGSGQTRISF-GDGSYSTPVWSPRGDLIAFTKQAGGKFSI 361

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           GVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE L+ T
Sbjct: 362 GVMKPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQAAGSGGPQLYSIDLTGYNEQLVKT 421

Query: 434 PAYASDPQWVGFMD 447
           P Y SDP W   M+
Sbjct: 422 PTYGSDPAWSPLME 435


>gi|209550776|ref|YP_002282693.1| translocation protein TolB [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|226705889|sp|B5ZNL9|TOLB_RHILW RecName: Full=Protein tolB; Flags: Precursor
 gi|209536532|gb|ACI56467.1| Tol-Pal system beta propeller repeat protein TolB [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 435

 Score =  464 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 207/441 (46%), Positives = 296/441 (67%), Gaps = 7/441 (1%)

Query: 8   AEELNMKINLCLLLVLIGGF-FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
             + ++   L ++  LIG   F T  +A V +     N  P+ IA T F    +LG +VS
Sbjct: 1   MVKCSLIRALMVIAGLIGAAAFTTPANALVTLDLRKGNVQPMPIAVTDFQG--DLGAQVS 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           +V++ DLQRS +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV KE   RLR 
Sbjct: 59  QVIAADLQRSGLFAPINKTAFIEKISNPDAAPRFEDWKVINAQALVTGRVTKEADGRLRA 118

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           EFRLWD    +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES   
Sbjct: 119 EFRLWDPFAGQQMTGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTK 178

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              K  L +MD+DG N+R LT   D ++  PRFSP++Q+V Y ++ ++   RVYL+    
Sbjct: 179 QQRKRQLAIMDQDGFNVRMLTDGSD-LVLTPRFSPSRQEVTYMSFANQQP-RVYLLQLET 236

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +  + +GNF  M  +PRFS +G++ ++S+Q+D   +IY++DL+S  T RLT+T  I+ S
Sbjct: 237 GQ-REVVGNFPGMTFSPRFSPDGQKVIMSLQQDANSNIYTMDLRSRTTTRLTSTAAIDTS 295

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            SYSPD +++ FESDR GK Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK 
Sbjct: 296 PSYSPDGARVSFESDRGGKPQIYVMNADGSGQTRISF-GDGSYSTPVWSPRGDLIAFTKQ 354

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +G KF+IGVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G 
Sbjct: 355 AGGKFSIGVMKPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQAAGAGGPQLYSIDLTGY 414

Query: 427 NETLINTPAYASDPQWVGFMD 447
           NE L+ TP+Y SDP W   M+
Sbjct: 415 NEQLVKTPSYGSDPAWSPLME 435


>gi|86748935|ref|YP_485431.1| translocation protein TolB [Rhodopseudomonas palustris HaA2]
 gi|118574594|sp|Q2IZ40|TOLB_RHOP2 RecName: Full=Protein tolB; Flags: Precursor
 gi|86571963|gb|ABD06520.1| Twin-arginine translocation pathway signal [Rhodopseudomonas
           palustris HaA2]
          Length = 449

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 188/419 (44%), Positives = 278/419 (66%), Gaps = 8/419 (1%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSF 87
                +V     N +P+ IA   FV    S +E+GG V++V++ +L+RS +F  I Q ++
Sbjct: 34  AFGQARVQITEGNVAPLPIAIPNFVAGTPSDNEVGGGVAQVITNNLKRSGLFAPIDQAAY 93

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
            +KITN D  P+F+ W S+ AQ LVTGR+ ++   RL+ EFRLWDV   +Q+ G+++F+S
Sbjct: 94  VEKITNIDVPPQFKSWTSINAQALVTGRMTRQSDGRLKAEFRLWDVATGQQLAGQQYFTS 153

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           P  WR+IAH ISD IY+ +TGEKG F+SR++F+ ES  +      L +MD+DGAN+RYLT
Sbjct: 154 PEYWRRIAHIISDQIYERLTGEKGYFDSRVVFIDESGPADRRVKRLALMDQDGANVRYLT 213

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              D ++  PRFSP+ Q++ Y  +   D  +VYL +    +  + +GNF  M  APRFS 
Sbjct: 214 RGSD-LVLTPRFSPSTQEITYMEFGQGDP-KVYLFNIETGQ-REIVGNFPGMSFAPRFSP 270

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+R ++S+Q+    +++ +DL+S +T RLT+T  I+ S SYSPD+++I FESDR GK Q
Sbjct: 271 DGQRIIMSLQQGGNSNLFVMDLRSKSTTRLTDTPAIDTSPSYSPDAARICFESDRGGKPQ 330

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +YVM ++G   +RIS   + SY  PVWSP+GD IAFTK  G +FAIG+MK DGS ER+L 
Sbjct: 331 IYVMPASGGQAQRISF-GDGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKPDGSGERILT 389

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
              + + PT++P+GR L+F R   G+ G  L+++D++GRNE  + TP YASDP W   +
Sbjct: 390 SGFHNEGPTFAPNGRVLMFFRDPGGNAGPSLFTVDVSGRNELRVPTPGYASDPAWSPLL 448


>gi|115526695|ref|YP_783606.1| translocation protein TolB [Rhodopseudomonas palustris BisA53]
 gi|115520642|gb|ABJ08626.1| transport system periplasmic component [Rhodopseudomonas palustris
           BisA53]
          Length = 450

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 183/422 (43%), Positives = 274/422 (64%), Gaps = 8/422 (1%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSEVVSKDLQRSDVFNLISQ 84
           P +  A  ++       +P+ IA   FV+      E+G  V++V++ +L+RS +F  I Q
Sbjct: 32  PHAALAQTRLQITEGTVAPMPIALPNFVAGTPADAEVGIGVAQVITNNLKRSGLFAPIDQ 91

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
            +F +KI+N D  P+F  W ++ AQ LVTGR+ ++   RL+ EFRLWDV   +Q+ G+++
Sbjct: 92  AAFIEKISNIDVPPQFPSWKTINAQALVTGRMTRQPDGRLKAEFRLWDVAAGQQLTGQQY 151

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
           F+SP  WR+IAH ISD IY+ +TGEKG F+SR++F+ E+         L +MD+DGAN+R
Sbjct: 152 FTSPEYWRRIAHIISDQIYERLTGEKGYFDSRVVFIDETGAKERRVKRLALMDQDGANVR 211

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           YLT   D ++  PRFSP  Q++ Y  +   D  RVYL +    +  + +GNF  M  +PR
Sbjct: 212 YLTRGSD-LVLTPRFSPTTQEITYMEFGQGDP-RVYLFNIETGQ-REIVGNFPGMSFSPR 268

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G+R ++S+Q+    +++ +DL+S +T RLT+T  I+ S SY+PD S+I FESDR G
Sbjct: 269 FSPDGQRIIMSMQQGGNSNLFVMDLRSKSTTRLTDTPAIDTSPSYAPDGSRICFESDRGG 328

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           K+Q+YVM + G   +RIS   E +Y  PVWSP+GD IAFTK  G +F+IG+MK DG+ ER
Sbjct: 329 KQQIYVMPAGGGGAQRISF-GEGNYSTPVWSPRGDYIAFTKQGGGQFSIGIMKPDGTGER 387

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           LL    + + PT++P+GR L+F R   G+ G  LY++D++GRNE  + TP +ASDP W  
Sbjct: 388 LLTSGYHNEGPTFAPNGRVLMFFRDPGGNGGPSLYTVDISGRNEQKVPTPGFASDPAWSP 447

Query: 445 FM 446
            +
Sbjct: 448 LL 449


>gi|298292994|ref|YP_003694933.1| Tol-Pal system beta propeller repeat protein TolB [Starkeya novella
           DSM 506]
 gi|296929505|gb|ADH90314.1| Tol-Pal system beta propeller repeat protein TolB [Starkeya novella
           DSM 506]
          Length = 452

 Score =  464 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 186/420 (44%), Positives = 274/420 (65%), Gaps = 9/420 (2%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSID-----ELGGKVSEVVSKDLQRSDVFNLISQD 85
              A +K+        P+ IA T FV        E G  V++++S DL+RS +F  I   
Sbjct: 35  PAQAVLKLDVTQGTVQPLPIAITDFVGGGSPQDVEAGKGVTQIISADLRRSGLFAPIDPA 94

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF 145
           +F +KI+NPD+ PRFQDW  + AQ LVTGR+ ++   R++ EFRLWDV   +Q+IG+++F
Sbjct: 95  AFVEKISNPDASPRFQDWRVINAQALVTGRITRQSDGRVKAEFRLWDVFAGQQLIGQQYF 154

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
           + P +WR++AH I+D IY+ +TGEKG F++RI+FV ES         L +MD+DGAN+ Y
Sbjct: 155 TQPENWRRVAHIIADAIYERLTGEKGYFDTRIVFVDESGPKEKRVKRLAIMDQDGANVTY 214

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           LT   D ++  PRFSP  Q++ Y +Y   +  RVYL++   +   + +GNF +M  +PRF
Sbjct: 215 LTRG-DDLVLTPRFSPTSQEITYMSYGRGEP-RVYLLNIE-NGQREVVGNFPNMSFSPRF 271

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           + +G+R ++S+Q+    +I+ +DL+S AT RLT+T  I+ +  YSPD SQI FESDR G 
Sbjct: 272 APDGQRVILSLQQGADSNIFVMDLRSKATTRLTDTPAIDTAPCYSPDGSQICFESDRGGG 331

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            Q+YVM  +GS+Q RIS   E  Y  PVWSP+GD+IAFTK +  +FAIG+M+ DG  ER+
Sbjct: 332 SQIYVMNPDGSNQHRISF-GEGRYSTPVWSPRGDVIAFTKQAQGRFAIGLMRPDGQGERI 390

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
           L E  + + PT++P+GR ++F R   G+ G +LY++D+ G NE  + TP+YASDP W   
Sbjct: 391 LTEGYHNEGPTFAPNGRVIMFFRDLGGNGGPQLYTVDVTGYNEQRVPTPSYASDPAWSPL 450


>gi|316932664|ref|YP_004107646.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Rhodopseudomonas palustris DX-1]
 gi|315600378|gb|ADU42913.1| Tol-Pal system beta propeller repeat protein TolB [Rhodopseudomonas
           palustris DX-1]
          Length = 444

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 187/419 (44%), Positives = 273/419 (65%), Gaps = 8/419 (1%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSF 87
                +V     N +P+ IA   FV    S  E+G  VS+V++ +L+RS +F  I Q ++
Sbjct: 29  AFGQARVQITEGNVAPLPIAIPNFVAGTPSDGEVGVGVSQVITNNLKRSGLFAPIDQAAY 88

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
            +KITN D  P+F+ W S+ AQ LVTGR+ ++G  RL+ EFRLWDV   +Q+ G+++F+S
Sbjct: 89  LEKITNIDVPPQFKSWASINAQALVTGRMTRQGDGRLKAEFRLWDVATGQQLAGQQYFTS 148

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           P  WR+IAH ISD IY+ +TGEKG F+SR++F+ ES  +      L +MD+DGAN+RYLT
Sbjct: 149 PEYWRRIAHIISDQIYERLTGEKGYFDSRVVFIDESGPAERRVKRLALMDQDGANVRYLT 208

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              D ++  PRFSP  Q++ Y  +   +  RVYL +    +  + +GNF  M  APRFS 
Sbjct: 209 RGSD-LVLTPRFSPTTQEITYMEFGQGEP-RVYLFNVETGQ-REIVGNFPGMSFAPRFSP 265

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G++ ++S+Q+    +++ +DL+S AT RLT+T  I+ S SY+PD S+I FESDR G+ Q
Sbjct: 266 DGQKIIMSLQQGGNSNLFVMDLRSKATTRLTDTPAIDTSPSYAPDGSRICFESDRGGRPQ 325

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y+M + G   +RIS   + SY  PVWSP+GD IAFTK  G +FAIG+MK DGS ER+L 
Sbjct: 326 IYIMPAGGGQAQRISF-GDGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKPDGSGERILT 384

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
              + + PT++P+GR L+F R   G  G  L+++D++GRNE  + TP YASDP W   +
Sbjct: 385 SGFHNEGPTFAPNGRVLMFFRDPGGKAGPSLFTVDVSGRNELRVPTPGYASDPAWSPLL 443


>gi|27382263|ref|NP_773792.1| translocation protein TolB [Bradyrhizobium japonicum USDA 110]
 gi|27355434|dbj|BAC52417.1| tolB protein [Bradyrhizobium japonicum USDA 110]
          Length = 491

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 192/441 (43%), Positives = 282/441 (63%), Gaps = 12/441 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV----SIDELGGKVSEV 68
           M +    L +L GG          ++  +   + PV IA T F+    S  ++G  V++V
Sbjct: 50  MTLTGSGLAMLGGG--HAFAQGQPRLRIDPTEFQPVPIAITNFLPGSPSDGDVGNGVTQV 107

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           ++ +L+RS +F  I Q +F ++I+N D  P+FQ+W ++ AQ LVTGR+ ++   RL+ EF
Sbjct: 108 ITNNLKRSGLFAPIDQAAFIERISNIDVAPQFQNWKTINAQALVTGRMTRQPDGRLKAEF 167

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWDV   +Q+ G+++F+SP  WR+IAH ISD IY+ +TGEKG F+SR++FV E+     
Sbjct: 168 RLWDVVSGQQLAGQQYFTSPEYWRRIAHIISDQIYERMTGEKGYFDSRVVFVDETGPKER 227

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L +MD+DGAN+RYLT   D ++  PRFSPN Q++ Y  +   D  +VYL +    +
Sbjct: 228 RVKRLAMMDQDGANVRYLTRGSD-LVLTPRFSPNSQEITYMEFGQGDP-KVYLFNIETGQ 285

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             + +GNF  M  APRFS +G+R ++S+Q+    +++ +DL+S +T RLT+T  I+ S S
Sbjct: 286 -REIVGNFPGMTFAPRFSPDGQRVIMSLQQGGNSNLFVMDLRSRSTTRLTDTPAIDTSPS 344

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLIAFTK 365
           YSPD ++I FESDR G+ Q+YVM + G   +RIS    D  A+Y  PVWSP+GD IAFT+
Sbjct: 345 YSPDGTRICFESDRGGRSQIYVMAAGGGAAQRISFSKDDTNATYSTPVWSPRGDYIAFTR 404

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             G +F+IGVMK DGS ERLL    + + PT+SP+GR L+F R   G  G  LYS+D++G
Sbjct: 405 QGGGQFSIGVMKPDGSGERLLTSGFHNEGPTFSPNGRVLMFFRDPGGSGGPSLYSVDISG 464

Query: 426 RNETLINTPAYASDPQWVGFM 446
           RNE  + TP +ASDP W   +
Sbjct: 465 RNELKVPTPGFASDPAWSPLL 485


>gi|39934195|ref|NP_946471.1| translocation protein TolB [Rhodopseudomonas palustris CGA009]
 gi|192289721|ref|YP_001990326.1| translocation protein TolB [Rhodopseudomonas palustris TIE-1]
 gi|67461966|sp|Q6NAR1|TOLB_RHOPA RecName: Full=Protein tolB; Flags: Precursor
 gi|39648043|emb|CAE26563.1| putative tolB protein precursor, periplasmic protein involved in
           the tonb-independent uptake of group A colicins
           [Rhodopseudomonas palustris CGA009]
 gi|192283470|gb|ACE99850.1| Tol-Pal system beta propeller repeat protein TolB [Rhodopseudomonas
           palustris TIE-1]
          Length = 444

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 189/419 (45%), Positives = 275/419 (65%), Gaps = 8/419 (1%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSF 87
                +V     N +P+ IA   FV    S  E+G  VS+V++ +L+RS +F  I Q ++
Sbjct: 29  AFGQARVQITEGNVAPLPIAIPNFVAGTPSDAEVGTGVSQVITNNLKRSGLFAPIDQAAY 88

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
            +KITN D  P+F+ W S+ AQ LVTGR+ ++G  RL+ EFRLWDV   +Q+ G+++F+S
Sbjct: 89  LEKITNIDVPPQFKSWASINAQALVTGRMTRQGDGRLKAEFRLWDVATGQQLAGQQYFTS 148

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           P  WR+IAH ISD IY+ +TGEKG F+SR++F+ ES  +      L +MD+DGAN+RYLT
Sbjct: 149 PEYWRRIAHIISDQIYERLTGEKGYFDSRVVFIDESGPADRRVKRLALMDQDGANVRYLT 208

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              D ++  PRFSP  Q++ Y  +   +  RVYL +    +  + +GNF  M  APRFS 
Sbjct: 209 RGSD-LVLTPRFSPTNQEITYMEFGQGEP-RVYLFNVETGQ-REIVGNFPGMSFAPRFSP 265

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+R ++S+Q+    +++ +DL+S AT RLT+T  I+ S SY+PD S+I FESDR GK Q
Sbjct: 266 DGQRIIMSLQQGGNSNLFVMDLRSKATTRLTDTPAIDTSPSYAPDGSRICFESDRGGKPQ 325

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y+M ++G   +RIS   + SY  PVWSP+GD IAFTK  G +FAIG+MK DGS ER+L 
Sbjct: 326 IYIMPASGGQAQRISF-GDGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKPDGSGERILT 384

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
              + + PT++P+GR L+F R   G+ G  L+++D++GRNE  + TP YASDP W   +
Sbjct: 385 SGFHNEGPTFAPNGRVLMFFRDPGGNAGPSLFTVDVSGRNELRVPTPGYASDPAWSPLL 443


>gi|92118972|ref|YP_578701.1| translocation protein TolB [Nitrobacter hamburgensis X14]
 gi|118574587|sp|Q1QHQ6|TOLB_NITHX RecName: Full=Protein tolB; Flags: Precursor
 gi|91801866|gb|ABE64241.1| TolB-like protein [Nitrobacter hamburgensis X14]
          Length = 450

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 192/445 (43%), Positives = 284/445 (63%), Gaps = 11/445 (2%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV----SIDEL 61
           F      M   +    VL+GG          +V  +  N +P+ IA   FV    S  E+
Sbjct: 12  FHPSRRQMISGMASAAVLLGG---GRAFGQARVQIDQGNVAPLPIAIPNFVAGSPSDSEV 68

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  V++V++ +L+RS +F  I Q ++ +KITN D  P+F +W ++ AQ LVTGR+ ++G 
Sbjct: 69  GAGVAKVITNNLKRSGLFAPIDQAAYIEKITNIDVPPQFANWKTINAQALVTGRMTRQGD 128

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL+ EFRLWDV   +Q+ G+++F+SP  WR+IAH ISD IY+ +TGEKG F+SR++FV 
Sbjct: 129 GRLKAEFRLWDVATGQQLAGQQYFTSPEYWRRIAHIISDQIYERLTGEKGYFDSRVVFVD 188

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES  +      L +MD+DGAN+RYLT   D ++  PRFSP+ Q++ Y  +   D  RVYL
Sbjct: 189 ESGAAQHRIKRLALMDQDGANVRYLTRGAD-LVITPRFSPSTQEITYMEFGQGDP-RVYL 246

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +    +  + +GNF  M  +PRF+ +G+R ++S+Q+    +++ +DL+S +T RLT+T 
Sbjct: 247 FNIETGQ-REIVGNFPGMSFSPRFAPDGQRIIMSLQQGGNSNLFVMDLRSKSTTRLTDTP 305

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I+ S SYSPD  +I FESDR G+ Q+YVM + G   +RIS   E SY  PVWSP+GD I
Sbjct: 306 AIDTSPSYSPDGGRICFESDRGGRPQIYVMGATGGAAQRISF-GEGSYSTPVWSPRGDYI 364

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           AFTK  G +F+IG++K DGS ER+L    + + PT++P+GR L+F R   G++G  LY+I
Sbjct: 365 AFTKQGGGQFSIGIIKPDGSGERILTSGFHNEGPTFAPNGRVLMFFRDPGGNSGPSLYTI 424

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D++GRNE  + TP +ASDP W   +
Sbjct: 425 DVSGRNELKVPTPGFASDPAWSPLL 449


>gi|218662997|ref|ZP_03518927.1| translocation protein TolB [Rhizobium etli IE4771]
          Length = 437

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 204/434 (47%), Positives = 291/434 (67%), Gaps = 7/434 (1%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           I +   L+ I  F  T  +A V++  N  N  P+ IA T F+    +G +VS+V++ DLQ
Sbjct: 10  IAVAAGLMTIAAF-ATPANALVEININKGNVQPLPIAVTDFL-QGNMGAQVSQVIAADLQ 67

Query: 75  RSDVFNLIS-QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
           RS +F   S +  F +KI+NPD+ PRF+DW  + AQ LVTGRV +E   RLR EFRLWD 
Sbjct: 68  RSGLFCARSTRQPFIEKISNPDASPRFEDWKVINAQALVTGRVTQEADGRLRAEFRLWDT 127

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
              +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES      K  L
Sbjct: 128 FAGQQMTGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQQRKRQL 187

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD+DG N+R LT   D ++  PRFSP++Q+V Y ++ ++   RVYL+     +  + +
Sbjct: 188 AIMDQDGFNVRMLTDGSD-LVLTPRFSPSRQEVTYMSFANQQP-RVYLLQLETGQ-REVV 244

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           GNF  M  +PRFS +G++ ++S+Q++   +IY++DL+S  T RLT+T  I+ S SYSPD 
Sbjct: 245 GNFPGMTFSPRFSPDGQKVIMSLQQEGNSNIYTMDLRSRTTTRLTSTAAIDTSPSYSPDG 304

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +++ FESDR GK Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK SG KF+I
Sbjct: 305 ARVSFESDRGGKPQIYVMDADGSGQTRISF-GDGSYSTPVWSPRGDLIAFTKQSGGKFSI 363

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           GVMK DGS ER+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE L+ T
Sbjct: 364 GVMKPDGSGERILTTGFHNEGPTWAPNGRVLMFFRQAAGSGGPQLYSIDLTGYNEQLVKT 423

Query: 434 PAYASDPQWVGFMD 447
           P Y SDP W   ++
Sbjct: 424 PTYGSDPAWSPLLE 437


>gi|32699699|sp|Q89ED5|TOLB_BRAJA RecName: Full=Protein tolB; Flags: Precursor
          Length = 454

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 192/441 (43%), Positives = 282/441 (63%), Gaps = 12/441 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV----SIDELGGKVSEV 68
           M +    L +L GG          ++  +   + PV IA T F+    S  ++G  V++V
Sbjct: 13  MTLTGSGLAMLGGG--HAFAQGQPRLRIDPTEFQPVPIAITNFLPGSPSDGDVGNGVTQV 70

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           ++ +L+RS +F  I Q +F ++I+N D  P+FQ+W ++ AQ LVTGR+ ++   RL+ EF
Sbjct: 71  ITNNLKRSGLFAPIDQAAFIERISNIDVAPQFQNWKTINAQALVTGRMTRQPDGRLKAEF 130

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWDV   +Q+ G+++F+SP  WR+IAH ISD IY+ +TGEKG F+SR++FV E+     
Sbjct: 131 RLWDVVSGQQLAGQQYFTSPEYWRRIAHIISDQIYERMTGEKGYFDSRVVFVDETGPKER 190

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L +MD+DGAN+RYLT   D ++  PRFSPN Q++ Y  +   D  +VYL +    +
Sbjct: 191 RVKRLAMMDQDGANVRYLTRGSD-LVLTPRFSPNSQEITYMEFGQGDP-KVYLFNIETGQ 248

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             + +GNF  M  APRFS +G+R ++S+Q+    +++ +DL+S +T RLT+T  I+ S S
Sbjct: 249 -REIVGNFPGMTFAPRFSPDGQRVIMSLQQGGNSNLFVMDLRSRSTTRLTDTPAIDTSPS 307

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLIAFTK 365
           YSPD ++I FESDR G+ Q+YVM + G   +RIS    D  A+Y  PVWSP+GD IAFT+
Sbjct: 308 YSPDGTRICFESDRGGRSQIYVMAAGGGAAQRISFSKDDTNATYSTPVWSPRGDYIAFTR 367

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             G +F+IGVMK DGS ERLL    + + PT+SP+GR L+F R   G  G  LYS+D++G
Sbjct: 368 QGGGQFSIGVMKPDGSGERLLTSGFHNEGPTFSPNGRVLMFFRDPGGSGGPSLYSVDISG 427

Query: 426 RNETLINTPAYASDPQWVGFM 446
           RNE  + TP +ASDP W   +
Sbjct: 428 RNELKVPTPGFASDPAWSPLL 448


>gi|209886402|ref|YP_002290259.1| Tol-Pal system beta propeller repeat protein TolB [Oligotropha
           carboxidovorans OM5]
 gi|209874598|gb|ACI94394.1| Tol-Pal system beta propeller repeat protein TolB [Oligotropha
           carboxidovorans OM5]
          Length = 449

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 190/430 (44%), Positives = 279/430 (64%), Gaps = 12/430 (2%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK----VSEVVSKDLQRS 76
           L++   F      A V++  N  N+ P+ IA   FV+  +   +    ++ V++ +L+RS
Sbjct: 27  LMMAAPFDRAFGQARVRI--NEGNFQPIPIAIPNFVAGGQADNEVSTGIASVITNNLRRS 84

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
            +F  I Q ++ ++I+N D  P+FQ+W  + AQ LVTGR  ++G  RL+ EFRLWDV   
Sbjct: 85  GLFAPIDQAAYIERISNIDVAPQFQNWRQINAQALVTGRATRQGDGRLKAEFRLWDVPAA 144

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q+ G+++F+SP SWR++AH ISD IY+ +TGEKG F+SR++FV E+         L +M
Sbjct: 145 QQLTGQQYFTSPESWRRVAHIISDQIYERLTGEKGYFDSRVVFVDETGPKDRRVKRLAMM 204

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DGAN+RYLT   D ++  PRFSP  Q++ Y  +   D  RVYL +    +  + +GNF
Sbjct: 205 DQDGANVRYLTRGAD-LVLTPRFSPTTQEITYMEFGGGDP-RVYLFNVETGQ-REIVGNF 261

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             M  APRFS +G+R ++S+Q+    ++Y +DL+S +T RLT+T  I+ S SY+PDSS+I
Sbjct: 262 PGMSFAPRFSPDGQRIIMSLQQGGNSNLYVMDLRSKSTTRLTDTPAIDTSPSYAPDSSRI 321

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            FESDR GK Q+YVM +NG   +RIS   + SY  PVWSP+GD IAFTK  G +FAIG+M
Sbjct: 322 CFESDRGGKPQIYVMGANGGAAQRISF-GDGSYSTPVWSPRGDYIAFTKQGGGQFAIGIM 380

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ER+L    + + PT++P+GR L+F R   G  G  LY++D++GRNE  + TP +
Sbjct: 381 KPDGSGERILTSGYHNEGPTFAPNGRVLMFFRDLGG--GPNLYTVDISGRNELKVPTPGF 438

Query: 437 ASDPQWVGFM 446
           ASDP W   +
Sbjct: 439 ASDPAWSPLL 448


>gi|148258089|ref|YP_001242674.1| translocation protein TolB [Bradyrhizobium sp. BTAi1]
 gi|146410262|gb|ABQ38768.1| protein tolB precursor [Bradyrhizobium sp. BTAi1]
          Length = 462

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 181/420 (43%), Positives = 264/420 (62%), Gaps = 8/420 (1%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQRSDVFNLISQDS 86
           S  A  +V      ++P+ IA   F        ++G  +S+V++ +L+RS +F  +   +
Sbjct: 46  SALAQKRVPILPGEFAPIPIAIPPFVPGGAGDADVGNGISQVITNNLKRSGLFAPVDPAA 105

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS 146
           F ++I N ++ P+F  W  L  Q LVTGR  ++   RL+ EFRLWD    +Q+ G+++ +
Sbjct: 106 FPERIANFEAPPQFASWRPLALQGLVTGRATRQPDGRLKAEFRLWDPNSGQQLTGQQYVT 165

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           +P  WR+IAH ISD IY  +TGEKG F+SR++FV ES  S      L +MD+DGAN+RYL
Sbjct: 166 APEYWRRIAHIISDQIYSQMTGEKGYFDSRVVFVDESGPSERRVKRLALMDQDGANVRYL 225

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T   D ++  PRFSP+ Q++ Y  +   D  +VYL++    +  + +GNF  M  +PRFS
Sbjct: 226 TRGAD-LVLTPRFSPSSQEITYMEFGQGDP-KVYLLNIETGQ-REIVGNFPGMSFSPRFS 282

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+R ++S+Q+    +++ +DL+S  T RLT+T  I+ S  YSPD +QI FESDR GK 
Sbjct: 283 PDGQRIILSLQQGGNSNLFVMDLRSRTTTRLTDTPAIDTSPCYSPDGNQICFESDRGGKP 342

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Q+YVM +NG   +RIS   E SY  PVWSP+GD IAFTK  G +FAIG+MK DGS ER+L
Sbjct: 343 QIYVMPANGGGAQRISF-GEGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKTDGSGERIL 401

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
               + + PT+SP+GR L+F R   G  G  LY+ID++GR E  + +P YASDP W   +
Sbjct: 402 TSGFHNEGPTFSPNGRVLMFFRDPGGTAGPSLYTIDVSGRFEQKVPSPGYASDPAWSPLL 461


>gi|254473216|ref|ZP_05086614.1| Tol-Pal system beta propeller repeat protein TolB [Pseudovibrio sp.
           JE062]
 gi|211957937|gb|EEA93139.1| Tol-Pal system beta propeller repeat protein TolB [Pseudovibrio sp.
           JE062]
          Length = 454

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 184/424 (43%), Positives = 271/424 (63%), Gaps = 8/424 (1%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSID---ELGGKVSEVVSKDLQRSDVFNLISQ 84
                +A +++     N  P+ IA + F       ++ G++S+VV+ DLQRS +F  I  
Sbjct: 35  ISQPAYALIELDITQGNVEPMPIAISPFAGSGLQEDVAGQISQVVAADLQRSGLFRPIDP 94

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
            +  Q+  N  ++PRF DW ++G+Q LVTG + ++   ++R EFRLWDV   +Q+IG++F
Sbjct: 95  AAHIQQEMNVGTMPRFGDWRTIGSQALVTGSIAQQANGQIRAEFRLWDVFAGQQLIGQQF 154

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
           F++P +WR++AH ISD IYQ +TGEKG F++R++F+ ES      +  L +MD+DGAN+R
Sbjct: 155 FTTPENWRRLAHIISDAIYQRLTGEKGYFDTRVVFIDESGPKDARRKRLAIMDQDGANVR 214

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           YLT   D ++  PRFSP  Q+V Y +Y   +  +VYL +    +  + +GNF  M  APR
Sbjct: 215 YLTRG-DDLVLTPRFSPVSQEVTYMSYVGGNP-QVYLFNIETGQ-REVLGNFPGMTFAPR 271

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G++ ++S+Q+    ++Y +DL++  T RLTNT  I+ S S+SPD  Q+VFESDR G
Sbjct: 272 FSPDGQKVIMSLQQGSNANLYLMDLRTRRTTRLTNTAAIDTSPSFSPDGRQVVFESDRGG 331

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +QLYVM SNGS  +RIS      Y  PVWSP+GDLIAFTK    +F IGV++ DG  ER
Sbjct: 332 SQQLYVMNSNGSGAERISF-GPGQYSTPVWSPRGDLIAFTKVHQGRFMIGVIRPDGKGER 390

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           +L E  + + P WSP+GR L F R   G   G +++++DL G NE L+ TP +ASDP W 
Sbjct: 391 ILTEGYHNEGPAWSPNGRVLTFFRDTVGEQGGPQVWTVDLTGYNEQLVQTPNFASDPAWS 450

Query: 444 GFMD 447
             +D
Sbjct: 451 PLLD 454


>gi|300023930|ref|YP_003756541.1| Tol-Pal system beta propeller repeat protein TolB [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299525751|gb|ADJ24220.1| Tol-Pal system beta propeller repeat protein TolB [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 445

 Score =  451 bits (1161), Expect = e-125,   Method: Composition-based stats.
 Identities = 187/450 (41%), Positives = 278/450 (61%), Gaps = 8/450 (1%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID- 59
           MS +  +   L     + + L L  GF  T   A +K        +P+ IA   FV  D 
Sbjct: 1   MSPKNPLQYALAFICLIAVGLALDSGF-ATRAQAQLKGTQTEGTIAPIPIAIPLFVGDDP 59

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
           +L   VS+V+  DL+RS +F  + + SF ++I + +++PRF DW S+ A  LV GR++  
Sbjct: 60  QLAANVSDVLQADLERSGLFRPLDRASFLEQIRDVNAVPRFGDWRSVQADALVVGRIVNA 119

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           G  R+  EFRLWDV   KQ+ G++F +S  +WR+IAH I+D +Y+ +TGEKG F++R++F
Sbjct: 120 GDGRVGAEFRLWDVASGKQLAGQRFSTSAQNWRRIAHMIADSVYERLTGEKGYFDTRVVF 179

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V E+  +      L +MD+DGAN+R LT  ++ ++  PRFSP  Q++ Y +Y   D  +V
Sbjct: 180 VDETGPAQNRVKRLAIMDQDGANVRLLTQGKE-LVLTPRFSPTNQEITYMSY-TSDQPKV 237

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLT 298
           ++M+    R  + +G+F  M  APRFS +G+R ++S+   D    IY +DL++    RLT
Sbjct: 238 FIMNLESGR-RELVGDFPGMTFAPRFSPDGQRVVMSLGTPDGRSSIYEMDLRTRQPRRLT 296

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +  I+ S SYSPD  QIVFESDR+G ++LYVM ++GS    IS     SY  PVWSP+G
Sbjct: 297 ESSGIDTSPSYSPDGRQIVFESDRDGTQKLYVMNADGSGAHPISLGG-GSYSTPVWSPRG 355

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSK 417
           D IAFT+ +G +F IGVMK DGS ER+L E  + + PTW+P+GR L+F R     + G K
Sbjct: 356 DYIAFTQQAGGRFLIGVMKPDGSGERVLTEGFHNEGPTWAPNGRVLMFWRDSQSTSGGPK 415

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           +YS+D+ G NE  + TP++ASDP W   ++
Sbjct: 416 IYSVDITGFNERQVTTPSFASDPAWSPLLN 445


>gi|121601818|ref|YP_988482.1| translocation protein TolB [Bartonella bacilliformis KC583]
 gi|120613995|gb|ABM44596.1| Tol-Pal system beta propeller repeat protein TolB [Bartonella
           bacilliformis KC583]
          Length = 442

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 183/430 (42%), Positives = 282/430 (65%), Gaps = 5/430 (1%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
            ++ + +  F  +  HA +K   + A+++P+ IA T F++ D +G K++ V++ DL+RS 
Sbjct: 13  FIISMSVCLFSGSFAHAQLKGTISKADFNPIPIAITDFIAQDSIGQKIAAVIAADLERSG 72

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  + +DSF +KIT+P+  P F +W  L AQ LVTG +  +   RLR++FRLWDV   K
Sbjct: 73  LFKTLDKDSFLEKITDPNGQPNFSNWQQLNAQGLVTGYIHSDSNGRLRIDFRLWDVFTHK 132

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           QI G++F+++   WR++AH ISD+IY  +TGE G F++R++FV E+         L +MD
Sbjct: 133 QIKGRRFYTTTEHWRRVAHMISDEIYSKMTGESGYFDTRVVFVDETGPFNARIKRLAIMD 192

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGAN+ YL+   + ++  PRFSP++Q++ Y  YD      VYL      +  + IG F 
Sbjct: 193 QDGANLTYLSNGTE-LVLTPRFSPSRQEITYMAYDKHKTAHVYLQQIETGQ-RELIGTFD 250

Query: 258 SMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +M +APRFS +G++ ++S+ KD  + ++Y++DL++    RLT T  I+ SASYSPD  QI
Sbjct: 251 NMTIAPRFSPDGQKVIMSLLKDNGSANLYTMDLRTRTITRLTTTRAIDTSASYSPDGKQI 310

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR+GK Q+Y+M ++GS+  RIS + E SY  P WSP+GD IAFTK S  +F+IGVM
Sbjct: 311 VFSSDRDGKPQIYIMDADGSNPHRISAN-EGSYSTPTWSPRGDYIAFTKQSQGQFSIGVM 369

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             +G  ERLL    + + PTW+P+GR L+F R ++ + G+++Y+ID+ GRNE  + TP  
Sbjct: 370 HPNGQGERLLTTGFHNEGPTWAPNGRVLMFFR-QNANQGAQIYTIDITGRNERRLPTPNN 428

Query: 437 ASDPQWVGFM 446
           ASDP W   +
Sbjct: 429 ASDPAWSPLL 438


>gi|299134178|ref|ZP_07027371.1| Tol-Pal system beta propeller repeat protein TolB [Afipia sp.
           1NLS2]
 gi|298590925|gb|EFI51127.1| Tol-Pal system beta propeller repeat protein TolB [Afipia sp.
           1NLS2]
          Length = 447

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 181/416 (43%), Positives = 268/416 (64%), Gaps = 10/416 (2%)

Query: 35  FVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
            V+V  +  N+ P+ IA   F        E+   ++ V++ +L+RS +F  I Q ++ ++
Sbjct: 37  QVRVQVDQGNFQPIPIAIPNFVAGGQGDGEVSAGIASVITNNLKRSGLFAPIDQAAYIER 96

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
           I+N D  P+F  W  + AQ LVTGR  ++   RL+ EFRLWDV   +Q+ G+++F+SP S
Sbjct: 97  ISNIDVPPQFPSWRQINAQALVTGRATRQSDGRLKAEFRLWDVPAAQQLTGQQYFTSPES 156

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           WR++AH ISD IY+ +TGEKG F+SR++FV ES  +      L +MD+DGAN+RYLT   
Sbjct: 157 WRRVAHIISDQIYERLTGEKGYFDSRVVFVDESGPAQRRVKRLTIMDQDGANVRYLTRGA 216

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D ++  PRFSP+ Q++ Y  +   D  RVYL +    +  + +GNF  M  APRFS +G+
Sbjct: 217 D-LVLTPRFSPSTQEITYMEFGGGDP-RVYLFNVETGQ-REIVGNFPGMSFAPRFSPDGQ 273

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R ++S+Q+    ++Y +DL+S +T RLT+T  I+ S SY+PD S+I FESDR GK Q+YV
Sbjct: 274 RIIMSLQQGGNSNLYVMDLRSKSTTRLTDTPAIDTSPSYAPDGSRICFESDRGGKPQIYV 333

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M + G   +RIS   + SY  PVWSP+GD IAFTK  G +FAIG+MK DGS ER+L    
Sbjct: 334 MAAGGGAAQRISF-GDGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKPDGSGERILTSGF 392

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           + + PT++P+GR ++F R      G  L+++D++GRNE  + TP +ASDP W   +
Sbjct: 393 HNEGPTFAPNGRVVMFFRDLG--AGPHLFTVDISGRNELQVPTPGFASDPAWSPLL 446


>gi|154246985|ref|YP_001417943.1| beta-propeller repeat-containing to-pal system protein TolB
           [Xanthobacter autotrophicus Py2]
 gi|154161070|gb|ABS68286.1| Tol-Pal system beta propeller repeat TolB [Xanthobacter
           autotrophicus Py2]
          Length = 450

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 179/412 (43%), Positives = 266/412 (64%), Gaps = 5/412 (1%)

Query: 34  AFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
           A  ++      + P+ IA T  +   E+G  +S V++ DL+RS +F  I   +F ++ITN
Sbjct: 42  AQPRIDLTPGAFKPIPIAITDLLGEVEIGRNISGVITADLRRSGLFAPIDPKAFVEQITN 101

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
           PD+ PRFQDW  + AQ L+TGRV ++   R +V FRLWDV   +Q+  ++F + P +WR+
Sbjct: 102 PDT-PRFQDWRVINAQALLTGRVTRQADGRFQVVFRLWDVFAGQQLAAQQFVAQPDNWRR 160

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           IAH I+D IY+ +TGEKG F++RI+FV ES         L +MD+DGAN+ YL+   D +
Sbjct: 161 IAHIIADAIYEKMTGEKGYFDTRIVFVDESGPKERRVKRLAIMDQDGANVSYLSRG-DGL 219

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  PRFSP  Q++ Y +Y   D  +V+L++    +  + +GNF  M  +PRF+ +G+R +
Sbjct: 220 VLTPRFSPTSQEITYMSYGAGDP-KVFLLNIETGQ-REIVGNFPGMSFSPRFAPDGQRVI 277

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +S+Q+    +I+ +DL+S AT RLT+T  I+ +  YSPD  QI FESDR G  Q+YVM +
Sbjct: 278 MSLQQGGNSNIFVMDLRSRATTRLTDTAAIDTAPCYSPDGRQICFESDRGGTSQIYVMNA 337

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +GS  +RIS    A Y  PVWSP+GD IA+T+ +  +FAIGVM+ DGS ER+L E  + +
Sbjct: 338 DGSGARRISF-GNARYSTPVWSPKGDWIAYTRQAEGRFAIGVMRTDGSGERVLTEGYHNE 396

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
            PT++P+GR ++F R   G +G  LYS+D+ G NE  + TP+YASDP W   
Sbjct: 397 GPTFAPNGRVIMFFRDPGGASGPSLYSVDVTGYNEQRVPTPSYASDPAWSPL 448


>gi|49476141|ref|YP_034182.1| translocation protein TolB [Bartonella henselae str. Houston-1]
 gi|67461959|sp|Q6G5R6|TOLB_BARHE RecName: Full=Protein tolB; Flags: Precursor
 gi|49238949|emb|CAF28247.1| tolB protein [Bartonella henselae str. Houston-1]
          Length = 443

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 183/433 (42%), Positives = 283/433 (65%), Gaps = 5/433 (1%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
            + +    +  F    +HA +K   ++A+++P+ IA T F S D +G K++ VV+ DL+R
Sbjct: 13  FIVICAFWLTSFSSVPVHAQLKGTISTADFNPIPIAVTDFFSNDSIGLKIAAVVAADLER 72

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F  + + SF +KI+NP+  P F  W  + AQ LV G+VI+E   RLRV+FRLWDV  
Sbjct: 73  SGLFLPLDKASFLEKISNPNRQPHFPYWQEIKAQGLVIGQVIRENDGRLRVDFRLWDVFG 132

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           ++Q+ G++F+++   WR++AH I+D+IY  +TGE G F++RI+F+ E+         L +
Sbjct: 133 QRQLKGRRFYTATERWRRVAHMIADEIYSEMTGESGYFDTRIVFIDETGPQNARIKRLAI 192

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD+DGAN+ Y++   + ++  PRFSP +Q++ Y  Y+   +  VYL    + +  + IG 
Sbjct: 193 MDQDGANLIYISDGSE-LVLTPRFSPKRQEITYMAYEHNQVPHVYLQQIEMGQ-RELIGT 250

Query: 256 FRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           F +M +APRFSS+G++ ++S +Q D + ++Y++DL++    RLT T  I+ SASYSPD +
Sbjct: 251 FNNMTIAPRFSSDGQKVIMSLLQNDGSANLYTMDLRTRMMTRLTTTSAIDTSASYSPDGT 310

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +IVF SDR GK Q+Y M ++GS+ +RIS + E SY  P+WSP+GD IAFTK    +F+IG
Sbjct: 311 KIVFSSDRSGKPQIYTMNADGSNLQRISSN-EGSYSTPIWSPRGDYIAFTKQLEGQFSIG 369

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           VM  DG  ER+L    + + PTW+P+GR L+F RK  G  G K+Y+ID+ GRNE  + TP
Sbjct: 370 VMHPDGQGERILTTGFHNEGPTWAPNGRVLMFFRKNPG-MGPKIYTIDITGRNERQLPTP 428

Query: 435 AYASDPQWVGFMD 447
             ASDP W   ++
Sbjct: 429 NDASDPAWSPLLN 441


>gi|295688123|ref|YP_003591816.1| Tol-Pal system beta propeller repeat-containing protein Tolb
           [Caulobacter segnis ATCC 21756]
 gi|295430026|gb|ADG09198.1| Tol-Pal system beta propeller repeat protein TolB [Caulobacter
           segnis ATCC 21756]
          Length = 443

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 175/444 (39%), Positives = 260/444 (58%), Gaps = 9/444 (2%)

Query: 7   IAEELNMKINLCLLLVLI---GGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGG 63
           + +E  M++   LL+V     G  F T   A ++V  N+    P+ IA   F      G 
Sbjct: 6   VKKETPMRLRALLLMVAALMSGAAFVTPAAAQIEVDINAGAVKPMPIAIPAFSGATR-GA 64

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           ++++V+S +L+RS +F  ++      K+++ +  PRF DW + GAQ L+ G+V       
Sbjct: 65  EIAQVISGNLERSGLFQPLNVSGVADKLSDVNIQPRFPDWQTTGAQALINGQVTVGPDGG 124

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           LRV+FRLWDV  ++Q++G +F S+P +WR++AH ISD +Y+ +TGEKG F++R+ FV+ES
Sbjct: 125 LRVDFRLWDVFSQQQLLGLQFSSTPDNWRRVAHKISDAVYERLTGEKGYFDTRVAFVAES 184

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                    L +MD+DGAN +YLT     I+  PRFS   Q++ Y          +YL++
Sbjct: 185 GPKLNRIKRLAIMDQDGANPQYLTDG-SYIVMTPRFSSTSQELTYMALRPTGS-SIYLLN 242

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R    +G F  M+ APRFS +G +   SV+K+   DIY +DL+S +T R+T    I
Sbjct: 243 LETSRQET-VGKFPGMVFAPRFSPDGGKVAFSVEKNGNSDIYVMDLRSRSTTRITTDPSI 301

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           + S S+SPD ++IVF SDR G+ Q+YVM ++GS  +RIS      Y  PVWSP+GD IAF
Sbjct: 302 DTSPSFSPDGTKIVFNSDRGGQAQIYVMNTDGSGVRRISFGG-GRYTTPVWSPRGDFIAF 360

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           TK +G +F IGVM+ DG  ERLL      + PTW+P+GR L+F R+  G    KL+++D+
Sbjct: 361 TKQTGGQFHIGVMRPDGGDERLLTTSYLDEGPTWAPNGRVLMFFRE-GGGGNPKLWTVDI 419

Query: 424 NGRNETLINTPAYASDPQWVGFMD 447
            GR           SDP W   +D
Sbjct: 420 TGRILRPAAYNGSGSDPAWSPLLD 443


>gi|288957825|ref|YP_003448166.1| TolB protein [Azospirillum sp. B510]
 gi|288910133|dbj|BAI71622.1| TolB protein [Azospirillum sp. B510]
          Length = 450

 Score =  449 bits (1154), Expect = e-124,   Method: Composition-based stats.
 Identities = 174/453 (38%), Positives = 268/453 (59%), Gaps = 17/453 (3%)

Query: 7   IAEELNMKINLC----LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID--- 59
           +  +  + + L      LL+ +G   P    A +++        P+ IA T F       
Sbjct: 1   MTTKTRLLLKLAGATGALLLSLGVAAPQEARAELRIDITRGVSEPLPIAITSFAGSGGRD 60

Query: 60  -ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN-PDSIPRFQDWNSLGAQVLVTGRVI 117
            ++G  +S+V+S DL+RS +F  +    F Q         PR+QDW +LGAQ LV G   
Sbjct: 61  AQMGADISKVISDDLERSGLFKPLDPRGFLQTPDQLRSGEPRYQDWKALGAQALVAGNTT 120

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
             G  R++V+FRLWDV   + + G  + +SP  WR+IAH ++D IY+ +TGE G F++RI
Sbjct: 121 TGGDGRMKVDFRLWDVAAGQYMQGLSYSASPQEWRRIAHIVADAIYKRLTGEDGYFDTRI 180

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           ++V+ES  +   K  L +MD+D AN ++LT  +  ++  PRFSP  Q++ Y +Y ++   
Sbjct: 181 VYVAESGPANARKKQLAIMDQDSANHQFLTDGQ-TLVLTPRFSPTSQEITYMSYFNKKP- 238

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           RVYL +    R  + +G+F  M  APRFS +G + ++S+ ++   DIY++DL++    +L
Sbjct: 239 RVYLFNIDTGRQ-EVLGDFPGMTFAPRFSPDGNKVIMSMAQNGNTDIYTLDLRTRRQTQL 297

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T+   I+ + SYSPD  +IVFESDR G +QLY+M ++GS  KR++   E  Y  PVWSP+
Sbjct: 298 TDAPGIDTAPSYSPDGQRIVFESDRGGTQQLYIMGADGSGVKRLTF-GEGRYGTPVWSPR 356

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGD 413
           GDLIAFT+  G  FA+GV++ DG+ ER+L E  +++ PTW+P+GR L+F           
Sbjct: 357 GDLIAFTRQRGSSFAVGVIRPDGTGERILTEAFHVEGPTWAPNGRVLMFFKDLPSGDGRG 416

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
             +KLYSID+ G NE  ++TP  ASDP W   +
Sbjct: 417 RNAKLYSIDITGANERRVSTPVDASDPAWSPLI 449


>gi|319409339|emb|CBI82983.1| TolB protein [Bartonella schoenbuchensis R1]
          Length = 444

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 192/439 (43%), Positives = 289/439 (65%), Gaps = 8/439 (1%)

Query: 12  NMKINLCLLLVLIGGFFPTS---IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
            M+  L   L++    + +S    HA +K   +SA+++P+S+A T F+S D +G K++ V
Sbjct: 3   GMRYTLFSWLIVTISVWLSSFSSAHAQLKGTISSADFNPISVAITDFISNDSIGLKIAAV 62

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V+ DL+RS +F+L+++ SF + I NPDS PRF +W     Q LVTG V +E   RLRV+F
Sbjct: 63  VAADLERSGLFSLLNKASFPETIINPDSQPRFLEWQHTNIQGLVTGHVNREASGRLRVDF 122

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWDV   +QI G++F+++P  WR++AH ++D+IY  +TGE+G F++RI+FV E+     
Sbjct: 123 RLWDVFGNRQIKGRRFYTTPEHWRRVAHMVADEIYSKMTGERGYFDTRIVFVDETGPRDA 182

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L +MD+DGAN+ YL+   + ++  PRFSPN+Q++ Y  YD      VYL    + +
Sbjct: 183 RVKRLAIMDQDGANLTYLSDGSE-LVLTPRFSPNRQEITYMAYDKNKTPHVYLQQIEMGQ 241

Query: 249 APKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
             + IG F +M +APRFS +G++ ++S +Q + + ++Y++DL++    RLT T  I+ SA
Sbjct: 242 -RELIGTFDNMTIAPRFSPDGQKVIMSLLQNNGSANLYTMDLRTRTMTRLTTTKAIDTSA 300

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SYSPD  QIVF SDR+G  Q+YVM ++G++  RIS + E +Y  PVWSP+GD IAFTK  
Sbjct: 301 SYSPDGKQIVFSSDRDGTPQIYVMNADGTNPYRISFN-EGNYSTPVWSPRGDYIAFTKQF 359

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +F+IGVM  DG  ERLL    + + PTW+P+GR L+F R+  G  G+K+Y+ID+ GRN
Sbjct: 360 QGQFSIGVMHPDGQGERLLTTGFHNEGPTWAPNGRVLMFFRQNAG-VGTKIYTIDITGRN 418

Query: 428 ETLINTPAYASDPQWVGFM 446
           E  + TP  ASDP W   +
Sbjct: 419 ERQLPTPHDASDPAWSALL 437


>gi|49474671|ref|YP_032713.1| translocation protein TolB [Bartonella quintana str. Toulouse]
 gi|67461954|sp|Q6FYQ1|TOLB_BARQU RecName: Full=Protein tolB; Flags: Precursor
 gi|49240175|emb|CAF26641.1| tolB protein [Bartonella quintana str. Toulouse]
          Length = 440

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 189/440 (42%), Positives = 291/440 (66%), Gaps = 7/440 (1%)

Query: 11  LNMKINLCLLLVLIGGFFPT--SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           +  +I     +V+   +  +  S+HA +K   +SA+++P+ IA T FVS D +G K++ V
Sbjct: 3   MTRRIFFSWFIVICSLWLSSFSSVHAKLKGTISSADFNPIPIAITDFVSNDSIGLKIAAV 62

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V+ DL+RS +F  + + SF +KI+NP+S P F  W  + AQ LVTG+VI+E   RLRV+F
Sbjct: 63  VTADLERSGLFLPLDKASFFEKISNPNSQPHFFHWQKIRAQGLVTGQVIRENDGRLRVDF 122

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWDV   +Q+ G++F+++   WR++AH I+D+IY  +TGE G F++RI+F+ E+     
Sbjct: 123 RLWDVFGHQQLKGRRFYTATERWRRVAHMIADEIYSEMTGESGYFDTRIVFIDETGPQNA 182

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L +MD+DGAN+ Y++   + ++  PRFSP +Q++ Y  Y+      VYL    + +
Sbjct: 183 RIKRLAIMDQDGANLIYISDGSE-LVLTPRFSPKRQEITYMAYERNQPPHVYLQQIEMGQ 241

Query: 249 APKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
             + IG F++M +APRFSS+G++ ++S +Q + + ++Y++DL++    RLT T  I+ SA
Sbjct: 242 -RELIGTFKNMTIAPRFSSDGQKVIMSLLQNNGSANLYTMDLRTRMMTRLTTTSAIDTSA 300

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SYSPD +QIVF SDR GK Q+Y M ++GS+ +RIS + E SY  P+WSP+GD IAFTK  
Sbjct: 301 SYSPDGTQIVFSSDRSGKPQIYTMNADGSNLQRISAN-EGSYSTPIWSPRGDYIAFTKQL 359

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +F+IGVM+ DG  ER+L    + + PTW+P+GR L+F RK  G  G K+Y+ID+ GRN
Sbjct: 360 EGQFSIGVMRPDGKGERILTTGFHNEGPTWAPNGRVLMFFRKNPG-MGPKIYTIDITGRN 418

Query: 428 ETLINTPAYASDPQWVGFMD 447
           E  + TP  ASDP W   ++
Sbjct: 419 ERQLPTPNDASDPAWSPLLN 438


>gi|83312310|ref|YP_422574.1| translocation protein TolB [Magnetospirillum magneticum AMB-1]
 gi|118574583|sp|Q2W2B0|TOLB_MAGMM RecName: Full=Protein tolB; Flags: Precursor
 gi|82947151|dbj|BAE52015.1| Periplasmic component of the Tol biopolymer transport system
           [Magnetospirillum magneticum AMB-1]
          Length = 447

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 167/443 (37%), Positives = 257/443 (58%), Gaps = 13/443 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE----LGGKVSEV 68
             +    + V++G        A V++        P+ IA   F         +G  ++ V
Sbjct: 8   RSLAAFAVFVILGVAAVLPAQAEVRIDITRGQMKPLPIAIPDFAGASAQDNRMGADIARV 67

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           VS DL+RS +F  I   +F Q   +  + PRF DW ++ A+ LV+G++      R+RVEF
Sbjct: 68  VSADLERSGLFKPIDPKAFIQNAASLQAGPRFPDWKAINAEALVSGKIESGADGRVRVEF 127

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWDV +   + G    +SP  WR+++H ++D IY+ +TGE G F+++I++++ES     
Sbjct: 128 RLWDVFNEAYMTGWTLSASPQDWRRLSHKVADAIYKRVTGEDGYFDTQIVYIAESGPKND 187

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  L +MD+DG N R+LT   + ++  PRFSP+ +++ Y +Y  + + RVY+ +    R
Sbjct: 188 RKKRLSIMDQDGENHRFLTDGSE-LVLTPRFSPSAREITYLSY-FKGVPRVYIFNLDTGR 245

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             + +GNF  M  APRFS +G + + S+ ++   +IY ++L +    +LT    I+ + S
Sbjct: 246 -RESLGNFPGMTFAPRFSPDGNKVVFSMAENGNTEIYEMNLLTRQKRQLTMNPAIDTAPS 304

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           YSPD  QIVFESDR G +Q+Y M ++GS+ +RIS   +  Y  PVWSP+GDLIAFTK  G
Sbjct: 305 YSPDGQQIVFESDRGGGQQIYTMSADGSNPQRISF-GDGRYGTPVWSPRGDLIAFTKQKG 363

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-----KKDGDTGSKLYSIDL 423
            +F IGVM+ DGS ERLL E   ++ PTW+P+GR L F R     ++      +LY+IDL
Sbjct: 364 GQFFIGVMRTDGSGERLLAEGFLVEGPTWAPNGRVLSFFRESPSDERGRGQVVRLYTIDL 423

Query: 424 NGRNETLINTPAYASDPQWVGFM 446
            G NE ++ TP   SDP W   +
Sbjct: 424 TGVNERVLLTPVDGSDPAWSPLI 446


>gi|83592430|ref|YP_426182.1| translocation protein TolB [Rhodospirillum rubrum ATCC 11170]
 gi|118574596|sp|Q2RVF0|TOLB_RHORT RecName: Full=Protein tolB; Flags: Precursor
 gi|83575344|gb|ABC21895.1| TolB protein [Rhodospirillum rubrum ATCC 11170]
          Length = 443

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 174/447 (38%), Positives = 261/447 (58%), Gaps = 14/447 (3%)

Query: 4   RFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE--- 60
           +      L   + L +++  I         A + +        P+ IA   F   D    
Sbjct: 6   KGKWRSTLGAMMALAVMVAAI-----PQARAELVIDITRGVREPMPIAIPVFGGTDAQSS 60

Query: 61  -LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
            +G  V  VVS DLQ S +F ++   ++ Q + N    P+F DW ++ AQ LV G V  +
Sbjct: 61  AMGRDVVGVVSNDLQGSGLFRVLDPAAYIQSLPNLAVQPQFADWRAINAQALVQGEVQPQ 120

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           G  RLRV FRLWDV   +Q++G+ F +   +WR+++H I+D+IY++ITGE+G F++R+++
Sbjct: 121 GDGRLRVAFRLWDVFSGQQVVGRAFLTQGDNWRRVSHIIADEIYKAITGEEGYFDTRVVY 180

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V+E+         L +MD+DGAN R LT   + ++  PRFSP  Q++ Y +Y    + RV
Sbjct: 181 VAETGPKTNRVKKLAIMDQDGANQRNLTNG-ESMVLTPRFSPTAQEITYLSY-YNSVPRV 238

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           YL +    R  + +G+F  M  APRFS +G + ++S+  D   +IY +DL++  + RLTN
Sbjct: 239 YLFNIETGR-RELLGDFPGMTFAPRFSPDGNKVIMSMALDGNTEIYEMDLRTRRSSRLTN 297

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              I+ S SY+PD  QI F SDR G +Q+YVM ++GS  +RIS   +  Y  PVWSP+GD
Sbjct: 298 HPSIDTSPSYAPDGRQITFNSDRGGAQQIYVMNADGSGVQRISF-GDGRYATPVWSPRGD 356

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           LIAFTK  G +F IG M+ DGS E++L E   ++ PTW+P+GR L+F R+      + L+
Sbjct: 357 LIAFTKLKGGRFFIGAMRPDGSGEKILTEGFLVEGPTWAPNGRVLMFFRQDPNGRTT-LH 415

Query: 420 SIDLNGRNETLINTPAYASDPQWVGFM 446
           SID+ G NE  I+TP  ASDP W   +
Sbjct: 416 SIDVTGYNERQISTPTEASDPAWSPLL 442


>gi|144897899|emb|CAM74763.1| TOLB PROTEIN PRECURSOR [Magnetospirillum gryphiswaldense MSR-1]
          Length = 451

 Score =  444 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 175/451 (38%), Positives = 259/451 (57%), Gaps = 20/451 (4%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSE 67
            ++I L  L  ++G     +  A V++     N  P+ IA  +         + G  ++ 
Sbjct: 4   RIRIALVGLFAVLGLLAAPAAMAEVRIDITRGNMKPLPIAVPELFGAQPAEVQAGRDIAR 63

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           VV+ DL+RS +F  I Q +F Q   +  + PRF DW  + A+ LV+G++   G   L +E
Sbjct: 64  VVAADLERSGLFKPIDQRAFIQNAASLQAGPRFADWRQINAEALVSGKIEVSGDGDLMIE 123

Query: 128 FRLWDVKDRKQIIGKKFFS-------SPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
           FRLWDV    Q+IG ++         +P  WR+ AH I+D IY+ +TGE G F+++++++
Sbjct: 124 FRLWDVFSETQMIGTRYNIAGKDIRRNPNLWRRAAHQIADAIYKRVTGEDGYFDTQLIYI 183

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           SES      K  L +MD+DG N R+LT   D ++  PRFSP  +++ Y +Y      RVY
Sbjct: 184 SESGPKNDRKKRLAIMDQDGENHRFLTSGED-LVLTPRFSPTAREITYMSY-FRGTPRVY 241

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           ++     R  + +G+F  M  APRFS +G + ++S+ +D   +IY ++L +    RLTN 
Sbjct: 242 ILQIDTAR-RELLGDFPGMTFAPRFSPDGNKVIMSLSQDGNTEIYEMNLLTRQKARLTNH 300

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+ S SYSPDS+++VF SDR G +QLY M ++GS   RIS   +  Y  PVWSP+GDL
Sbjct: 301 PSIDTSPSYSPDSTRVVFNSDRGGAQQLYTMNADGSGVARISF-GDGRYATPVWSPRGDL 359

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF----SRKKDGDTG- 415
           IAFTK  G +F IGVM+ DGS ERLL +   ++ PTW+P+GR L F    +    G  G 
Sbjct: 360 IAFTKMKGGEFFIGVMRPDGSDERLLAQGYLVEGPTWAPNGRVLAFWKETASDSQGRGGT 419

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           +KLY+IDL G NE  + TP   SDP W   +
Sbjct: 420 AKLYTIDLTGFNERQVITPLDGSDPAWSPLI 450


>gi|254455821|ref|ZP_05069250.1| Tol-Pal system beta propeller repeat protein TolB [Candidatus
           Pelagibacter sp. HTCC7211]
 gi|207082823|gb|EDZ60249.1| Tol-Pal system beta propeller repeat protein TolB [Candidatus
           Pelagibacter sp. HTCC7211]
          Length = 447

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 182/446 (40%), Positives = 270/446 (60%), Gaps = 23/446 (5%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV-------------SIDELGGKV 65
           L+ + +    P    A ++V     N +P+ +A +                  + +G ++
Sbjct: 5   LIFICLFLIIPIKAFALIEVDITRGNLNPLPLAVSPLSIDENSKKSFEKILDKENIGSEI 64

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
           S +V  +L+ S +FN +++D+F Q     +  PRF+DWN + AQ L+TG+V     ++LR
Sbjct: 65  SIIVENNLRTSGLFNPLNKDAFLQAPDIANLKPRFEDWNLIKAQALITGKVAYI-DEKLR 123

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           VEFRLWDV   K+++   F + P +WR++ H ISD IY+ +TGEKG F++RI++V+E   
Sbjct: 124 VEFRLWDVLAGKEMMALAFTTVPNNWRRVGHIISDKIYERLTGEKGYFDTRIIYVAEEGP 183

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
               K  L +MD+DGAN ++LT   + ++  PRF+P  Q V Y +Y  +++ RVYL+D  
Sbjct: 184 KTQRKKKLAIMDQDGANNKFLTLGNE-LVLTPRFNPTSQMVTYLSY-FKNLPRVYLLDIE 241

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + +G+F  M  APRFS +GK+ ++S  KD   DI+++DL++   ER+TN   I+ 
Sbjct: 242 TGTQ-EVVGDFPGMTFAPRFSPDGKKIIMSFAKDGKSDIFTMDLENRIVERITNHPSIDT 300

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S SYSP+   I F SDR G +Q+Y+M+++GSD KRIS      Y  PVWSP+GDLIAFTK
Sbjct: 301 SPSYSPNGKFIAFNSDRSGYQQIYIMKNDGSDVKRISF-GNGIYGTPVWSPRGDLIAFTK 359

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-----KDGDTGSKLYS 420
               KF IGVM+ DG+ ERLL E+   +AP+WSP+GR LIF R+     K     +KL+S
Sbjct: 360 LHNGKFYIGVMRTDGTGERLLTENYYQEAPSWSPNGRVLIFYRETKTNAKGEGFSAKLWS 419

Query: 421 IDLNGRNETLINTPAYASDPQWVGFM 446
           IDL G NE L+ TP  ASDP W   +
Sbjct: 420 IDLTGYNERLVTTPTDASDPSWSSLL 445


>gi|221236273|ref|YP_002518710.1| translocation protein TolB [Caulobacter crescentus NA1000]
 gi|220965446|gb|ACL96802.1| TolB protein [Caulobacter crescentus NA1000]
          Length = 443

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 169/423 (39%), Positives = 249/423 (58%), Gaps = 6/423 (1%)

Query: 25  GGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ 84
           G  F T   A ++V  N+    P+ IA   F      G ++++V++ +L+RS +F  ++ 
Sbjct: 27  GAAFVTPAAAQIEVDINAGAVKPLPIAIPVFSGSTR-GAEIAQVITGNLERSGLFQPLNV 85

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
                K+ + +  PRF DW S GAQ L+ G+V       LRV+FRLWDV  ++Q++G +F
Sbjct: 86  AGVPDKLADVNVQPRFPDWQSTGAQALINGQVTVGADGGLRVDFRLWDVFSQQQLLGLQF 145

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            S+P +WR++AH ISD +Y+ +TGEKG F++R+ FV+ES         L +MD+DGAN +
Sbjct: 146 SSTPDNWRRVAHKISDAVYERLTGEKGYFDTRVAFVAESGPKLNRIKRLAIMDQDGANPQ 205

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           YLT     I+  PRFS   Q++ Y          +YL++    R    +G F  M+ APR
Sbjct: 206 YLTDG-SYIVMTPRFSSTSQELTYMALRPTGS-SIYLLNLETSRQET-VGKFPGMVFAPR 262

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G +   SV+++   DIY +DL+S AT R+T    I+ S S+SPD ++IVF SDR G
Sbjct: 263 FSPDGSKVAFSVERNGNSDIYVMDLRSRATTRITTDPAIDTSPSFSPDGTKIVFNSDRGG 322

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + Q+YVM ++GS  +RIS      Y  PVWSP+GD IAFTK +G +F IGVM+ DG  ER
Sbjct: 323 QAQIYVMNTDGSGVRRISYGG-GRYTTPVWSPRGDFIAFTKQTGGEFHIGVMRADGGDER 381

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           LL      + PTW+P+GR L+F R+       +L+++D+ GR          ASDP W  
Sbjct: 382 LLTTSYLDEGPTWAPNGRVLMFFRE-GPSGNPRLWTVDITGRILRPAAYSGSASDPAWSP 440

Query: 445 FMD 447
            +D
Sbjct: 441 LLD 443


>gi|23015569|ref|ZP_00055341.1| COG0823: Periplasmic component of the Tol biopolymer transport
           system [Magnetospirillum magnetotacticum MS-1]
          Length = 444

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 169/440 (38%), Positives = 255/440 (57%), Gaps = 13/440 (2%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE----LGGKVSEVVSK 71
                 V++G        A V++        P+ IA  +F         +G  ++ VVS 
Sbjct: 8   AAAAAFVILGVVAALPASAEVRIDITRGQMKPLPIAIPEFAGASAQDNRVGADIARVVSA 67

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+RS +F  I   +F Q   +  + PRF DW ++ A+ LV+G++      R+RVEFRLW
Sbjct: 68  DLERSGLFKPIDPKAFIQNAASLQAGPRFPDWKAINAEALVSGKIESGADGRIRVEFRLW 127

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           DV +   + G    +SPA WR+++H ++D IY+ +TGE G F+++I++++ES      K 
Sbjct: 128 DVFNEAYMTGWTLSASPADWRRLSHKVADAIYKRVTGEDGYFDTQIVYIAESGPKNDRKK 187

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +MD+DG N R+LT   + ++  PRFSP+ +++ Y +Y  + + RVY+ +    R  +
Sbjct: 188 RLSIMDQDGENHRFLTDGSE-LVLTPRFSPSAREITYLSY-FKGVPRVYIFNLDTGR-RE 244

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +GNF  M  APRFS +G + + S+ +    +IY ++L +    +LT    I+ + SYSP
Sbjct: 245 SLGNFPGMTFAPRFSPDGNKVIFSMAESGNTEIYEMNLLTRQKRQLTYNPAIDTAPSYSP 304

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D  QIVFESDR G +QLYVM ++G +  RIS   +  Y  PVWSP+GDLIAFTK  G +F
Sbjct: 305 DGQQIVFESDRGGGQQLYVMGADGGNATRISF-GDGRYATPVWSPRGDLIAFTKQKGGQF 363

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-----KKDGDTGSKLYSIDLNGR 426
            IGVM+ DGS ERLL E   ++ PTW+P+GR L F R     ++      +LY+IDL G 
Sbjct: 364 FIGVMRTDGSGERLLAEGFLVEGPTWAPNGRVLSFFRESPSDERGRGQVVRLYTIDLTGV 423

Query: 427 NETLINTPAYASDPQWVGFM 446
           NE ++ TP   SDP W   +
Sbjct: 424 NERVLLTPIDGSDPAWSPLI 443


>gi|197106553|ref|YP_002131930.1| periplasmic component of the Tol biopolymer transport system
           [Phenylobacterium zucineum HLK1]
 gi|196479973|gb|ACG79501.1| periplasmic component of the Tol biopolymer transport system
           [Phenylobacterium zucineum HLK1]
          Length = 430

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 180/433 (41%), Positives = 258/433 (59%), Gaps = 8/433 (1%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           + L L  +   G       A ++V  N  +  P+ IA   F      G  +++V+S +LQ
Sbjct: 6   LMLALACLFAAGLTVQPARAEIEVNVNRGDVQPLPIAVPAFGGQQ--GADIAQVISANLQ 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           RS +F  +   +F ++  N    PRF DW  + AQ LV G+V  EG  RLRV+FRLWDV 
Sbjct: 64  RSGLFQPLDPAAFIERDVNIAVQPRFADWKQINAQALVNGQVTVEG-GRLRVDFRLWDVF 122

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             +Q++G +F SSP +WR++AH ISD +Y+ +TGEKG F++R++FV+ES   G     L 
Sbjct: 123 AEQQLLGLQFTSSPENWRRVAHKISDAVYERLTGEKGYFDTRVVFVAESGPRGKRVKRLA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD+DGAN  YLT     I+  PRFS N Q++ Y +    D   ++L +    R  + +G
Sbjct: 183 IMDQDGANPSYLTDG-SYIVMTPRFSSNSQEITYMSLR-PDGSSIWLFNLETGR-RESLG 239

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           NF+ M+ APRFS +G R   SV++    DIY + L S ++ RLT+   I+ S S+SPD  
Sbjct: 240 NFQGMVFAPRFSPDGGRVAFSVERGGNSDIYVMSLSSRSSTRLTSDPSIDTSPSFSPDGQ 299

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +IVF SDR G  QLYVM ++GS+ +RIS   +  Y  PVWSP G+ IAFTK +G +F IG
Sbjct: 300 RIVFNSDRSGSAQLYVMGADGSNPRRISF-GQGRYTTPVWSPTGEFIAFTKQTGGQFHIG 358

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           VM+ DGS ERLL      + PTW+P+GR L+FSR+  G    +L+S+D+ GR    +  P
Sbjct: 359 VMRADGSDERLLTSSYLDEGPTWAPNGRVLMFSRETPG-GAPRLWSVDVTGRVLQPMPYP 417

Query: 435 AYASDPQWVGFMD 447
              SDP W   ++
Sbjct: 418 GSGSDPAWSPLLN 430


>gi|71083302|ref|YP_266021.1| translocation protein TolB [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|91762268|ref|ZP_01264233.1| translocation protein TolB precursor [Candidatus Pelagibacter
           ubique HTCC1002]
 gi|118574591|sp|Q4FN21|TOLB_PELUB RecName: Full=Protein tolB; Flags: Precursor
 gi|71062415|gb|AAZ21418.1| tolB protein [Candidatus Pelagibacter ubique HTCC1062]
 gi|91718070|gb|EAS84720.1| translocation protein TolB precursor [Candidatus Pelagibacter
           ubique HTCC1002]
          Length = 446

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 182/433 (42%), Positives = 262/433 (60%), Gaps = 23/433 (5%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFV-------------SIDELGGKVSEVVSKDLQRSDV 78
             A ++V     N +P+ +A +                  ++LG ++S VV  +L++S +
Sbjct: 17  AFALIEVDITRGNLNPLPVAVSPLSIDNKSKENFKKILKQEDLGSEISIVVENNLRQSGL 76

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           FN + +++F Q+    +  PRF+DWN + AQ LVTG+V     ++LRVEFRLWDV   K+
Sbjct: 77  FNPLDKNAFLQEPDVANLKPRFEDWNLIKAQALVTGKVTFV-DEKLRVEFRLWDVLAGKE 135

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++   F + P++WR++ H I+D +Y+ +TGEKG F++RI++VSE          L +MD+
Sbjct: 136 MMALAFTTVPSNWRRVGHIITDKVYERLTGEKGYFDTRIIYVSEEGPKTKRIKKLAIMDQ 195

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG N +YLT   + ++  PRFSP  Q V Y +Y   ++ RVYL+D       + +G+F  
Sbjct: 196 DGFNNKYLTLGNE-LVLTPRFSPTNQMVTYLSY-FRNLPRVYLLDIETGMQ-EVVGDFPG 252

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           M  APRFS +GK+ ++S  KD   DIY++DL++   ER+TN   I+ S SYSPD  +I F
Sbjct: 253 MTFAPRFSPDGKKIIMSFAKDGNSDIYTMDLENRIVERITNHPSIDTSPSYSPDGKKITF 312

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SDR G +Q+YVM SNG + KRIS      Y  PVWSP+GDLIAFTK    KF IGVM+ 
Sbjct: 313 NSDRSGYQQIYVMDSNGKNVKRISF-GNGLYGTPVWSPRGDLIAFTKLHKGKFYIGVMRT 371

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSR-----KKDGDTGSKLYSIDLNGRNETLINT 433
           DG+ ERLL E+   +AP+WSP+GR LIF R      K     +KL+SIDL G NE ++ T
Sbjct: 372 DGTGERLLTENFYQEAPSWSPNGRVLIFYRETKTNSKGEGFSAKLWSIDLTGYNEKMVET 431

Query: 434 PAYASDPQWVGFM 446
              ASDP W   +
Sbjct: 432 ETDASDPSWSSLL 444


>gi|167648382|ref|YP_001686045.1| translocation protein TolB [Caulobacter sp. K31]
 gi|167350812|gb|ABZ73547.1| Tol-Pal system beta propeller repeat protein TolB [Caulobacter sp.
           K31]
          Length = 441

 Score =  439 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 168/424 (39%), Positives = 247/424 (58%), Gaps = 6/424 (1%)

Query: 24  IGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLIS 83
           +    PT   A ++V  +     P+ +A   F      G  +++V+S +L+RS +F  ++
Sbjct: 24  MAALAPTVARAQIEVDIDKGAVKPLPVAIPAFSGGGR-GADIAQVISGNLERSGLFQPLN 82

Query: 84  QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK 143
             +   K+ + +  PRF DW + GAQ L+ G+V       LRV+FRLWD   ++Q++G +
Sbjct: 83  VANVADKLADVNVQPRFPDWQATGAQALINGQVTVGADGVLRVDFRLWDTFSQQQLLGLQ 142

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           F S+  +WR++AH ISD +Y+ +TGEKG F++R++FV+ES         L +MD+DGAN 
Sbjct: 143 FTSTAENWRRVAHKISDAVYERLTGEKGYFDTRVVFVAESGGKLTRVKRLAIMDQDGANP 202

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +YLT     I+  PRFS   Q++ Y          +YL +    R  + IG F  M+ AP
Sbjct: 203 QYLTDG-SYIVMTPRFSSTSQEITYMALRPTGS-SIYLTNLETAR-TETIGKFPGMVFAP 259

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           RFS +G +   SV+K    DIY +DL+S  + R+T    I+ S S+SPD S+IVF SDR 
Sbjct: 260 RFSPDGGKVAFSVEKGGNSDIYVMDLRSRQSTRITTDPAIDTSPSFSPDGSKIVFNSDRG 319

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G+ QLY+M ++GS  +RIS      Y  PVWSP+GD IAFTK +G +F IGVMK DG  E
Sbjct: 320 GQAQLYIMNADGSGVRRISYGG-GRYTTPVWSPRGDFIAFTKQTGGEFHIGVMKVDGGDE 378

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           RLL      + PTW+P+GR L+FSR+      S+L+++D+ GR          ASDP W 
Sbjct: 379 RLLTTSYLDEGPTWAPNGRVLMFSRE-GSSGNSRLWTVDITGRILRPAAYTGAASDPAWS 437

Query: 444 GFMD 447
             +D
Sbjct: 438 PLLD 441


>gi|188584485|ref|YP_001927930.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           populi BJ001]
 gi|179347983|gb|ACB83395.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           populi BJ001]
          Length = 446

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 175/441 (39%), Positives = 256/441 (58%), Gaps = 3/441 (0%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKV 65
           F    L   +   L ++ +     T   A +++   S  + P+ IA   F     LG  V
Sbjct: 6   FTRRTLLPALTAALGVLALTLPAATPARAQLQLRIGSGAFQPMPIAVADFAGDASLGTLV 65

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
           S V++ +L+RS  F  + +  F +   + D+ P F+ W   G Q LVTGRV ++   RL 
Sbjct: 66  SSVITNNLRRSGYFTPLEKGRFPENP-SFDAAPNFEAWKGAGVQALVTGRVGRDASGRLT 124

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           V FRLWDV   +QI G+++ +  A+ R+  H +SD +Y  +TG    F+SR+ FV ES  
Sbjct: 125 VAFRLWDVASGQQITGQQYGTDVANARRTGHLVSDAVYTKVTGLGPWFDSRVAFVDESGP 184

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
               +  L VMD+DGAN+R LT   D  +  PR+SP  Q +A+ T       +V ++D  
Sbjct: 185 KENRRKRLMVMDQDGANVRALTGGGDVSVVAPRYSPAGQDIAFMTQAPGQQPKVQMIDLE 244

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  + +GNF SM  +PRFS +G+R ++SVQ+    DI +VDL S A   +T  L I+ 
Sbjct: 245 TGK-RQTVGNFASMSASPRFSPDGRRLVMSVQQGGNADIVTVDLGSKAQTPVTQGLAIDT 303

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S SYSPD SQIVFESDR G +Q+YVM ++GS+ +R+S   E S   P WSP+GDLIAFT+
Sbjct: 304 SPSYSPDGSQIVFESDRGGSQQIYVMGADGSNPRRLSF-GEGSASQPAWSPRGDLIAFTR 362

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                FAI VMK DGS ER+L E  + ++PT++P+G+ ++F R   G  G KLY +D+ G
Sbjct: 363 QRKGGFAICVMKPDGSGERVLTEGFHNESPTFAPNGQYVMFFRDPGGQGGGKLYMVDITG 422

Query: 426 RNETLINTPAYASDPQWVGFM 446
           + E  + TP++ASDP W   +
Sbjct: 423 KVEQPVPTPSFASDPTWSPLL 443


>gi|240851219|ref|YP_002972622.1| translocation protein TolB [Bartonella grahamii as4aup]
 gi|240268342|gb|ACS51930.1| translocation protein TolB [Bartonella grahamii as4aup]
          Length = 441

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 186/443 (41%), Positives = 288/443 (65%), Gaps = 6/443 (1%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSI-HAFVKVATNSANYSPVSIAFTKFVSIDELGGKV 65
           +      K+    ++         S  +A +K   +SA+++P+ IA T F+S D +G K+
Sbjct: 1   MMTITRHKVFAWFIVTCGLWLSSISSGYAQLKGTISSADFNPIPIAITDFISNDSIGLKI 60

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
           S VV+ DL+RS +F  +++++F + I+NP+  P F  W  + AQ LVTG+V++E   RLR
Sbjct: 61  SAVVTADLERSGLFLPLNKENFLENISNPNKQPHFASWQKIKAQGLVTGQVMREIDGRLR 120

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           V+FRLWDV  ++Q+ G++F+++   WR++AH I+D+IY  +TGE G F++RI+F+ E+  
Sbjct: 121 VDFRLWDVFGQRQLKGRRFYTATERWRRVAHMIADEIYSEMTGESGYFDTRIVFIDETGP 180

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  L +MD+DGAN+ Y++   + ++  PRFSP +Q++ Y  Y+D  +  VYL    
Sbjct: 181 QNARIKRLAMMDQDGANLIYMSDGSE-LVLTPRFSPKRQEMTYMAYEDNQVPHVYLQQIE 239

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           + +  + IG F +M +APRFSS+G++ ++S +Q D + ++Y++DL++    RLT T  I+
Sbjct: 240 MGQ-RELIGTFNNMTIAPRFSSDGQKVIMSLLQNDGSANLYTMDLRTRTMTRLTTTSAID 298

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            SASYSPD  QIVF SDR GK Q+Y M ++GSD +RIS + E SY  P+WSP+GD IAFT
Sbjct: 299 TSASYSPDGKQIVFSSDRSGKPQIYKMNADGSDIQRISSN-EGSYSTPIWSPRGDYIAFT 357

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           K    +F+IGVM+ DG  ER+L    + + PTW+P+GR L+F RK  G  G K+Y+ID+ 
Sbjct: 358 KQLSGQFSIGVMRPDGQGERILTTGFHNEGPTWAPNGRVLMFFRKNPG-MGPKIYTIDIT 416

Query: 425 GRNETLINTPAYASDPQWVGFMD 447
           GRNE  + TP  ASDP W   ++
Sbjct: 417 GRNERQLPTPNDASDPAWSPLLN 439


>gi|163869131|ref|YP_001610370.1| translocation protein TolB [Bartonella tribocorum CIP 105476]
 gi|161018817|emb|CAK02375.1| TolB protein [Bartonella tribocorum CIP 105476]
          Length = 441

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 184/443 (41%), Positives = 289/443 (65%), Gaps = 6/443 (1%)

Query: 7   IAEELNMKINLCLLLVLIGGFFP-TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKV 65
           +      ++    ++         +S++A +K   +SA+++P+ IA T F+S D +G K+
Sbjct: 1   MMTITRHRVFTWFIVTCSLWLSSMSSVYAQLKGTISSADFNPIPIAITDFISNDSIGSKI 60

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
           + VV+ DL+RS +F  + +++F +KI+NP+  P F  W  + AQ LV G+V++E   RLR
Sbjct: 61  TAVVTADLERSGLFVPLDKENFFEKISNPNKQPHFASWQKIKAQGLVMGQVMREIDGRLR 120

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           V+FRLWDV  ++Q+ G++F+++   WR++AH I+D+IY  +TGE G F++RI+F+ E+  
Sbjct: 121 VDFRLWDVFGQRQLKGRRFYTATERWRRVAHMIADEIYSEMTGESGYFDTRIVFIDETGP 180

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  L +MD+DGAN+ Y++   + ++  PRFSP +Q++ Y  Y+D  +  VYL    
Sbjct: 181 QNARIKRLAMMDQDGANLIYMSDGSE-LVLTPRFSPKRQEMTYMAYEDNQVPHVYLQQIE 239

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           + +  + IG F +M +APRFSS+G++ ++S +Q D + ++Y++DL++    RLT T  I+
Sbjct: 240 MGQ-RELIGTFHNMTIAPRFSSDGQKVIMSLLQNDGSANLYTMDLRTRTMTRLTTTSAID 298

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            SASYSPD  QIVF SDR GK Q+Y M ++GSD +RIS + E SY  P+WSP+GD IAFT
Sbjct: 299 TSASYSPDGQQIVFSSDRSGKPQIYKMNADGSDIQRISSN-EGSYSTPIWSPRGDYIAFT 357

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           K    +F+IGVM+ DG  ER+L    + + PTW+P+GR L+F RK  G  G K+Y+ID+ 
Sbjct: 358 KQLSGQFSIGVMRPDGQGERILTTGFHNEGPTWAPNGRVLMFFRKNPG-MGPKIYTIDIT 416

Query: 425 GRNETLINTPAYASDPQWVGFMD 447
           GRNE  + TP  ASDP W   ++
Sbjct: 417 GRNERQLPTPNDASDPAWSPLLN 439


>gi|312115991|ref|YP_004013587.1| Tol-Pal system beta propeller repeat protein TolB [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311221120|gb|ADP72488.1| Tol-Pal system beta propeller repeat protein TolB [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 435

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 181/419 (43%), Positives = 261/419 (62%), Gaps = 6/419 (1%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
           P+   A V+V         + IA   F   D +  + ++VV+ DLQRS +F  +   +F 
Sbjct: 21  PSLASAQVEVEIRRGQVRAIPIAVADFTG-DPVAAETAQVVTADLQRSGLFRPVPNSAFI 79

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
           ++  N D+ PRFQDW  L  Q LV GRV   G  RLR E+RLWDV   + I G++FF   
Sbjct: 80  ERGANVDTPPRFQDWKVLNIQALVVGRVTDAGDGRLRGEYRLWDVVTGRHIAGEQFFIPR 139

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
            + R++AH I+D +Y+ +TGE+G F+SR++FV ES         L +MD+DGAN+R LT 
Sbjct: 140 NASRRLAHIIADAVYERLTGERGYFDSRVVFVDESGPKNQRVKRLAIMDQDGANLRLLTQ 199

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            R+ ++  PRF P  Q++ Y  Y + +  RV L +    +  + +G+F +M  APRFS  
Sbjct: 200 GRE-LVLTPRFHPLSQEITYTAYRNGEP-RVMLRNIMTGQE-EVLGDFPNMSFAPRFSPQ 256

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G R ++S+Q+  + +I+ +D++S    RLT T  I+ +  YSPD  QIVFESDREGK+QL
Sbjct: 257 GDRVVMSLQEGGSSNIFELDVRSRRMMRLTQTNAIDTAPCYSPDGRQIVFESDREGKQQL 316

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           YVM ++GS Q+RI+   +  Y  PVWSP+GDLIAFTK     FAIGV++ DGS ER+L E
Sbjct: 317 YVMNADGSGQRRITF-GDGRYSTPVWSPRGDLIAFTKQVPGGFAIGVIRPDGSGERVLTE 375

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
             + + PTWSP+GR ++F R+  G + G+KL+SIDL G NE  + TP++ SDP W   +
Sbjct: 376 GYHNEGPTWSPNGRVILFFRESGGANGGAKLFSIDLTGYNERQMPTPSFGSDPAWSPLL 434


>gi|16127460|ref|NP_422024.1| translocation protein TolB [Caulobacter crescentus CB15]
 gi|32699717|sp|Q9A3H4|TOLB_CAUCR RecName: Full=Protein tolB; Flags: Precursor
 gi|13424914|gb|AAK25192.1| tolB protein [Caulobacter crescentus CB15]
          Length = 432

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 169/423 (39%), Positives = 249/423 (58%), Gaps = 6/423 (1%)

Query: 25  GGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ 84
           G  F T   A ++V  N+    P+ IA   F      G ++++V++ +L+RS +F  ++ 
Sbjct: 16  GAAFVTPAAAQIEVDINAGAVKPLPIAIPVFSGSTR-GAEIAQVITGNLERSGLFQPLNV 74

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
                K+ + +  PRF DW S GAQ L+ G+V       LRV+FRLWDV  ++Q++G +F
Sbjct: 75  AGVPDKLADVNVQPRFPDWQSTGAQALINGQVTVGADGGLRVDFRLWDVFSQQQLLGLQF 134

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            S+P +WR++AH ISD +Y+ +TGEKG F++R+ FV+ES         L +MD+DGAN +
Sbjct: 135 SSTPDNWRRVAHKISDAVYERLTGEKGYFDTRVAFVAESGPKLNRIKRLAIMDQDGANPQ 194

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           YLT     I+  PRFS   Q++ Y          +YL++    R    +G F  M+ APR
Sbjct: 195 YLTDG-SYIVMTPRFSSTSQELTYMALRPTGS-SIYLLNLETSRQET-VGKFPGMVFAPR 251

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G +   SV+++   DIY +DL+S AT R+T    I+ S S+SPD ++IVF SDR G
Sbjct: 252 FSPDGSKVAFSVERNGNSDIYVMDLRSRATTRITTDPAIDTSPSFSPDGTKIVFNSDRGG 311

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + Q+YVM ++GS  +RIS      Y  PVWSP+GD IAFTK +G +F IGVM+ DG  ER
Sbjct: 312 QAQIYVMNTDGSGVRRISYGG-GRYTTPVWSPRGDFIAFTKQTGGEFHIGVMRADGGDER 370

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           LL      + PTW+P+GR L+F R+       +L+++D+ GR          ASDP W  
Sbjct: 371 LLTTSYLDEGPTWAPNGRVLMFFRE-GPSGNPRLWTVDITGRILRPAAYSGSASDPAWSP 429

Query: 445 FMD 447
            +D
Sbjct: 430 LLD 432


>gi|84687705|ref|ZP_01015578.1| translocation protein TolB precursor [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84664288|gb|EAQ10779.1| translocation protein TolB precursor [Rhodobacterales bacterium
           HTCC2654]
          Length = 444

 Score =  437 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 160/448 (35%), Positives = 257/448 (57%), Gaps = 12/448 (2%)

Query: 8   AEELNMKINLCLLLV--LIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV----SIDEL 61
             +LN+ + L L+ +  +      T+    +++        P+  A   F     S   +
Sbjct: 1   MTKLNLLVALVLMTLAPVFSATTATAQQGPLRIEITEGVIEPLPFAVPTFQAETGSAGAI 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
             ++S V++ DL  + +F  I   +F   +TN  S  ++ DW ++ AQ L+TG V ++G 
Sbjct: 61  AEEISRVIAADLSGTGLFREIPSSAFIANVTNFASPIQYADWKAVNAQALITGAVSEQG- 119

Query: 122 DRLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
            ++ V+FR++DV    ++  G ++  +    R+IAH ++D +Y  ITGE G F+SR++FV
Sbjct: 120 GQINVKFRVYDVFSGTELGQGLQYTGTTDGVRRIAHKVADTVYSRITGETGYFDSRVVFV 179

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           SES      +  L VMD DGAN++YLT S + +L  PRFS +  +V Y +Y+     ++Y
Sbjct: 180 SESGPKNARRKQLAVMDYDGANVKYLTDS-ESLLLAPRFSKSGDRVLYTSYETGQP-QIY 237

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +++    +         +M  +PRFS +G   + S+++    +IY +DL      +LTN+
Sbjct: 238 VLEVGSAQRRALGTGGGNMAFSPRFSPDGNGLIFSLEQGGNSEIYRMDLNGGGLVQLTNS 297

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+ + S+SPD S+IVFESDR G +Q+YVM +NG + +RIS      Y  PVWSP+GDL
Sbjct: 298 PAIDTAPSFSPDGSRIVFESDRSGTQQIYVMSANGGEPQRISF-GPGRYGTPVWSPRGDL 356

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLY 419
           IAFTK +  +F IGVM+ DGS+ERLL      + PTW+P+GR ++F+R+  G +    LY
Sbjct: 357 IAFTKQNAGRFHIGVMRTDGSEERLLTASFLDEGPTWAPNGRVIMFTRESQGAEGAPGLY 416

Query: 420 SIDLNGRNETLINTPAYASDPQWVGFMD 447
           S+D++GRN   + TP  ASDP W    +
Sbjct: 417 SVDISGRNLRRVPTPDAASDPSWGPLQN 444


>gi|209965095|ref|YP_002298010.1| translocation protein TolB [Rhodospirillum centenum SW]
 gi|209958561|gb|ACI99197.1| protein TolB precursor [Rhodospirillum centenum SW]
          Length = 451

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 168/427 (39%), Positives = 257/427 (60%), Gaps = 14/427 (3%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDE----LGGKVSEVVSKDLQRSDVFNLISQD 85
            +    +++        P+ IA T F+        +  ++S V++ +L+RS +F  +   
Sbjct: 28  AASAQELRLDITKGVTEPMPIAITTFLGGTPQEQTVARQISSVITANLERSGLFQPLDPA 87

Query: 86  SFKQKITN-PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
            F Q       + PRF DW  +GAQ LV G V  +   RLRV+FRL+DV   KQ+ G  +
Sbjct: 88  RFIQTPEQLASAPPRFADWRLIGAQALVAGGVQAQPDGRLRVQFRLFDVVYGKQLTGLAY 147

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
           F+    WR++AH ISD IY+ +TGE+G F++R+++++ES  +      L +MD+DG N R
Sbjct: 148 FTQAEGWRRVAHIISDAIYKRLTGEEGYFDTRVVYIAESGPANQRVKRLAIMDQDGENNR 207

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +LT  R  ++  PRFSP  Q++ Y +Y +    RVYL +    R  + +G+F  M  APR
Sbjct: 208 FLTDGR-VLVLTPRFSPTAQEITYLSYFNNKP-RVYLFNIDTGRQ-ELLGDFPGMTFAPR 264

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G + ++S+ +    DIY++DL++    RLT+   I+ + SYSPD  QIVFESDR G
Sbjct: 265 FSPDGNQVIMSLAQSGNTDIYTLDLRTRRQTRLTDHPGIDTAPSYSPDGKQIVFESDRGG 324

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +QLY M ++GS+ KRI+   +  Y  PVWSP+GDLIAFT+ +G +F IGV++ DG+ ER
Sbjct: 325 TQQLYTMNADGSNVKRITF-GQGRYATPVWSPRGDLIAFTRLNGGRFYIGVIRPDGTGER 383

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-----SKLYSIDLNGRNETLINTPAYASD 439
           LL E  +++ PTW+P+GR L++ ++K    G     S+L++IDL G NE  + T   ASD
Sbjct: 384 LLTEAFHVEGPTWAPNGRVLMYFKEKPVGAGARQRQSRLFTIDLTGVNERQMVTATDASD 443

Query: 440 PQWVGFM 446
           P W   +
Sbjct: 444 PAWSPLI 450


>gi|149202852|ref|ZP_01879823.1| translocation protein TolB precursor [Roseovarius sp. TM1035]
 gi|149143398|gb|EDM31434.1| translocation protein TolB precursor [Roseovarius sp. TM1035]
          Length = 441

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 166/443 (37%), Positives = 252/443 (56%), Gaps = 9/443 (2%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVS 66
           +   + L   L L         +  +++        P+  A   FVS      ELG  ++
Sbjct: 2   MRFMMTLLAALTLWAMPVLAQGNGPLRIEITEGVIEPLPFAVPDFVSDSAAGQELGRNIA 61

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            V++ DL  + +F  I   +   +IT+ +S  ++ DW ++ AQ L+TG V  +G  R+  
Sbjct: 62  SVIAADLNGTGLFRQIPSSAHISRITSFESPVQYADWRAINAQALITGAVSTDGAGRIIA 121

Query: 127 EFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           +FR++DV   +++  G++   +   WR+IAH ++D +Y  ITGE G F+SR++FV+ES  
Sbjct: 122 KFRIYDVFSGQELGAGQQLVGTQDGWRRIAHKVADQVYSRITGEGGYFDSRVVFVAESGP 181

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  L +MD DGAN++YLT S   I+  PRFSP   +V Y +Y+     R+Y++D  
Sbjct: 182 KDQRAKRLGIMDYDGANVQYLTDSTS-IVLAPRFSPTGDRVLYTSYETG-FPRIYVLDVA 239

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +      +M  APRF+ NG+  + S+ +    D+Y++D+ S A+ RLT    I  
Sbjct: 240 NVGRRELPTQDATMSFAPRFAPNGRTVVYSLTQGGNTDLYTMDIGSGASTRLTTAPSIET 299

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + SYSPD SQIVFESDR G  QLY+M + G + +RIS   E  Y  PVWSP+GDL+AFTK
Sbjct: 300 APSYSPDGSQIVFESDRSGTPQLYIMSAGGGEARRISF-GEGRYGTPVWSPRGDLVAFTK 358

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLN 424
            S  +F IGVM+ DGS+ERLL      + PTW+P+GR ++F+R+  G+ G + LYS+D+ 
Sbjct: 359 QSKGRFHIGVMRTDGSEERLLTASFLDEGPTWAPNGRVIMFTRETQGEQGQASLYSVDIT 418

Query: 425 GRNETLINTPAYASDPQWVGFMD 447
           GRN   + T   ASDP W    +
Sbjct: 419 GRNLKQVPTNTGASDPSWSPLQN 441


>gi|83950088|ref|ZP_00958821.1| translocation protein TolB precursor [Roseovarius nubinhibens ISM]
 gi|83837987|gb|EAP77283.1| translocation protein TolB precursor [Roseovarius nubinhibens ISM]
          Length = 440

 Score =  435 bits (1118), Expect = e-120,   Method: Composition-based stats.
 Identities = 173/442 (39%), Positives = 254/442 (57%), Gaps = 12/442 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKFVSI----DELGGKV 65
           M   + L L  +  F   ++ A    +++        P+  A   FV      +EL   +
Sbjct: 1   MYRMMTLALACLVAFQAPALQAQDGPLRLEIKEGVIEPMPFAVPDFVPESGAAEELSRNI 60

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
           + VV+ DL  + +F  ISQD+F  ++T+  S  +F DW ++ AQ LVTG V  +G  R+ 
Sbjct: 61  ARVVAADLSGTGLFREISQDAFISRVTSFSSPVQFADWKAINAQALVTGAVAVDGTGRVT 120

Query: 126 VEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            +FR+WDV   +++  G +F  +   WR+IAH ++D +Y  ITGE G F+SR++FVSE+ 
Sbjct: 121 AKFRVWDVFAGQELGSGLQFVGTVDGWRRIAHKVADQVYSRITGEGGYFDSRVVFVSETG 180

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L +MD DGAN++YLT S   I+  PRFSP   +V Y +Y+     RVY++D 
Sbjct: 181 PKDNRAKRLSIMDYDGANLKYLTDSSS-IVLAPRFSPTGDRVLYTSYESG-FPRVYVLDV 238

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                        +M  APRFS +G+  + S+ +    DIY++D+ + A++RLTN   I 
Sbjct: 239 ASVSRRLLESQDGTMSFAPRFSPDGRTVVYSLIQGGNTDIYTMDIATGASQRLTNAPSIE 298

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + S+SPD  QIVFESDR G  Q+YVM + G + +RIS      Y  PVWSP+GD IAFT
Sbjct: 299 TAPSFSPDGRQIVFESDRSGTNQIYVMNAQGGEARRIS-GGTGQYGTPVWSPRGDYIAFT 357

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDL 423
           K S  +F IGVM+ +G +ERLL      + PTWSP+GR ++F+R+  G  G S+L+S+D+
Sbjct: 358 KQSKGRFHIGVMRVNGEEERLLTASFLDEGPTWSPNGRVIMFTRETQGAQGQSRLWSVDI 417

Query: 424 NGRNETLINTPAYASDPQWVGF 445
            GRN   + TP  ASDP W   
Sbjct: 418 TGRNLRQVQTPGGASDPSWSPL 439


>gi|262277490|ref|ZP_06055283.1| Tol-Pal system beta propeller repeat protein TolB [alpha
           proteobacterium HIMB114]
 gi|262224593|gb|EEY75052.1| Tol-Pal system beta propeller repeat protein TolB [alpha
           proteobacterium HIMB114]
          Length = 445

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 182/444 (40%), Positives = 273/444 (61%), Gaps = 20/444 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKV---------SE 67
           +L+ L    F +   A V +     N  P+  A + F   + ++   K+          +
Sbjct: 4   ILVTLFLILFTSKSFAVVTIDITRGNLEPLPTAISNFYIDNPEKFSEKIKSLKLEENLPK 63

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V+  +L RS +F ++   S+ Q+       PRF+DW  + AQ++V+G++  + K RLRVE
Sbjct: 64  VIKGNLMRSGLFYVLDNKSYIQQPKLSHLKPRFEDWRLIKAQIMVSGKLRIDEKGRLRVE 123

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           FRLWDV   K+I G   F++P+SWR+IAH ISD IYQ +TGE+G F++RI++V+ES    
Sbjct: 124 FRLWDVVSAKEIEGLALFATPSSWRRIAHIISDKIYQRLTGEEGYFDTRIIYVAESGPKT 183

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  L +MD+DGAN ++LT   + ++  PRFSPN + V Y +Y  +++ RVYL++    
Sbjct: 184 QREKKLAIMDQDGANNKFLTLGNE-LVLTPRFSPNGKMVTYMSY-FKNLPRVYLLNIETG 241

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              + +G+F  M  APRFS +G++ ++S  +D   DIY++D++S   E++T+   I+ S 
Sbjct: 242 IQ-EVVGDFPGMTFAPRFSPDGRKIIMSFARDGNSDIYTMDIESRRVEQITSNPAIDTSP 300

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SPD   IVF SDR G +Q+Y M+S+G   KRIS+ K   Y  PVWSP+GDLIAFTK  
Sbjct: 301 SFSPDGRFIVFNSDRSGFQQIYTMRSDGRGVKRISRGK-GLYGTPVWSPRGDLIAFTKIH 359

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-----DTGSKLYSID 422
             KF IGVM+ DG+ ERLL ++   +AP+WSP+GR LIF R+  G      + +KL++ID
Sbjct: 360 KGKFYIGVMRTDGTGERLLTQNFYQEAPSWSPNGRVLIFYRETAGGKKGQGSSAKLWAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFM 446
           + G NE  I TP  ASDP W G +
Sbjct: 420 ITGYNEVKIKTPTDASDPSWSGLL 443


>gi|330814394|ref|YP_004358633.1| TolB protein precursor [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487489|gb|AEA81894.1| TolB protein precursor [Candidatus Pelagibacter sp. IMCC9063]
          Length = 448

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 199/449 (44%), Positives = 277/449 (61%), Gaps = 23/449 (5%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID-----------ELGGK 64
            LCL+ + I  FF  S  A VK+     N  P+  A +KF   +           EL  K
Sbjct: 3   KLCLIFISI-LFFNHSAFAVVKIDITRGNLEPLPTAISKFYVDNPSKFSPELKALELDKK 61

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +SEV+S +L+RS +F++I   S+ Q      + P FQDW  + AQ++++G+++ + K RL
Sbjct: 62  ISEVISNNLKRSGLFSIIDPKSYIQSPRIAHAKPTFQDWALIKAQIMISGKLVIDEKKRL 121

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RVEFRLWDV + K++ G   F++P SWR+IAH ISD IY+ +TGE G F++RI++V+ES 
Sbjct: 122 RVEFRLWDVVNAKEMEGLALFATPNSWRRIAHIISDKIYERMTGELGYFDTRIIYVAESG 181

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L +MD+DGAN +YLT   + ++  PRF+P  Q V Y +Y  +++ RVYL++ 
Sbjct: 182 PKDQRIKKLAIMDQDGANNKYLTLGNE-LVLTPRFNPASQMVTYMSY-FKNLPRVYLLNI 239

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 + +G+F  M  APRFS +GK+ ++S  KD   DIYS+D++S   E+LT+   I+
Sbjct: 240 ETGMQ-ELVGDFPGMTFAPRFSPDGKKIIMSFAKDGNSDIYSMDIKSRVVEQLTSHPSID 298

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S SYS D SQI F SDR G +Q+YVM+S+GS  KRIS   +  Y  PVWSP+GDLIAFT
Sbjct: 299 TSPSYSSDGSQITFNSDRSGAQQIYVMKSDGSKAKRISF-GQGLYGTPVWSPRGDLIAFT 357

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK-------DGDTGSK 417
           K    KF IGVM+ DG+ ERLL E+   +AP+WSP+GR LIF R+           T S 
Sbjct: 358 KIYRGKFYIGVMRSDGTGERLLTENYYQEAPSWSPNGRVLIFYRESRTKKSKTGFSTSSS 417

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVGFM 446
           L+SIDL G NE  I T   ASDP W G +
Sbjct: 418 LWSIDLTGYNERKIKTLTDASDPAWSGLL 446


>gi|260431108|ref|ZP_05785079.1| Tol-Pal system beta propeller repeat protein TolB [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260414936|gb|EEX08195.1| Tol-Pal system beta propeller repeat protein TolB [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 439

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 169/441 (38%), Positives = 253/441 (57%), Gaps = 11/441 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIH-AFVKVATNSANYSPVSIAFTKFVSIDEL----GGKVSE 67
           M++   LL+ L     P S     +++  +     P+  A   FV            +S 
Sbjct: 2   MRLLTSLLVGLTLLSAPASAQTGPLRLELDQGIIEPMPFAVPNFVPDTPAAAQYPTDISR 61

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V++ DL  + +F  I+ ++F  ++ + ++  +F DW ++ A  LVTG V   G + L V 
Sbjct: 62  VIAADLTGTGLFREIAPEAFISRVNSFEAPIQFADWKAINADALVTGAVNLSG-NTLTVR 120

Query: 128 FRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           FR+WDV   +++  G +F      WR++AH ++D +Y  ITGE G F+SR+ FVSES   
Sbjct: 121 FRVWDVFSGQELGNGLQFSGPTDGWRRMAHKVADQVYSRITGEGGYFDSRVAFVSESGPK 180

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L +MD DGAN++YLT S   I+  PRFSP   ++ Y +Y+     R+YL+D   
Sbjct: 181 DQRRKRLAIMDYDGANVQYLTDS-AAIVLAPRFSPAGDRLLYTSYESGRP-RIYLLDVGR 238

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +  +      +M  +PRFS +G+  + S+ +    D++ +DL S  + RLTNT  I  +
Sbjct: 239 VKKQELKTQDGTMSFSPRFSPDGRSIVYSLTQGGNTDLWKMDLASGQSVRLTNTPAIETA 298

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            SY+PD S+IVFESDR G  QLYVM +NG +  RIS   +  Y  PVWSP+GDLIAFTK 
Sbjct: 299 PSYAPDGSRIVFESDRSGTPQLYVMPANGGEATRISF-GQGRYGTPVWSPRGDLIAFTKQ 357

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNG 425
           +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++F+R+  G +G S LYS+D++G
Sbjct: 358 NKGRFHIGVMRVDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGASGRSSLYSVDISG 417

Query: 426 RNETLINTPAYASDPQWVGFM 446
           RN   + TP   SDP W   +
Sbjct: 418 RNLRPVRTPDGGSDPSWGPLL 438


>gi|149915620|ref|ZP_01904146.1| translocation protein TolB precursor [Roseobacter sp. AzwK-3b]
 gi|149810512|gb|EDM70355.1| translocation protein TolB precursor [Roseobacter sp. AzwK-3b]
          Length = 440

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 170/442 (38%), Positives = 254/442 (57%), Gaps = 10/442 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIH-AFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSE 67
           M+  L LL VL+    P +     +++        P+  A   FVS      E G +++E
Sbjct: 2   MRYILSLLTVLMLWSLPATAQTGPLRIEITEGVIEPLPFAAPDFVSDSTTGAEFGRRIAE 61

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V++ DL  + +F  I  ++F  ++T+  S  ++ DW ++ AQ LVTG V  +   +L V 
Sbjct: 62  VIAADLTGTGLFREIQPEAFISRVTSFSSPVQYADWKAINAQALVTGAVSVDAGGQLVVR 121

Query: 128 FRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           FRL+DV   +++  G +   +   WR+IAH ++D IY  ITGE   F+SR+++V+E+   
Sbjct: 122 FRLYDVFAGQELGQGLQLVGTQDGWRRIAHKVADQIYSRITGEAPYFDSRVVYVAETGPK 181

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L +MD DGAN+ YLT S   I+  PRFSP+ ++V Y +Y+     R+Y++    
Sbjct: 182 DQRIKRLAIMDYDGANVSYLTDSAS-IVLAPRFSPDGRQVLYTSYESG-FPRIYVLQVGS 239

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +         +M  APRF+ +G+R + S+      D+Y +D+ S  + RLTN   I  +
Sbjct: 240 AQRRVLEQQDGTMSFAPRFAPDGRRVVYSLSSGGNTDLYMMDIGSGTSTRLTNAPSIETA 299

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD S+IVFESDR G  QLY+M S G + +RIS   +  Y  PVWSP+GDLIAFTK 
Sbjct: 300 PSFSPDGSRIVFESDRSGSPQLYIMPSAGGEAQRISF-GQGRYGTPVWSPRGDLIAFTKQ 358

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSIDLNG 425
           S  +F IGV++ DGS+ERLL      + PTWSP+GR ++F+R+  G  GS  LYS+D++G
Sbjct: 359 SKGRFHIGVIRTDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGAQGSASLYSVDISG 418

Query: 426 RNETLINTPAYASDPQWVGFMD 447
           RN   + T A  SDP W    D
Sbjct: 419 RNLRKVPTEAGGSDPSWSPLQD 440


>gi|159043660|ref|YP_001532454.1| translocation protein TolB [Dinoroseobacter shibae DFL 12]
 gi|189035981|sp|A8LHQ6|TOLB_DINSH RecName: Full=Protein tolB; Flags: Precursor
 gi|157911420|gb|ABV92853.1| Tol-Pal system beta propeller repeat TolB [Dinoroseobacter shibae
           DFL 12]
          Length = 446

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 171/447 (38%), Positives = 245/447 (54%), Gaps = 13/447 (2%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF-----VKVATNSANYSPVSIAFTKFVSI----DEL 61
           +       L + L   F      A      +++        P+ IA   F++      + 
Sbjct: 1   MKRAFLSALSVGLAALFLTGPAQAQGNPGPLRIEITEGVIEPLPIAVPPFLAETPAASQF 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
              +++VV+ DL+ S +F  I +++F   IT+ DS  ++ DW ++ AQ LVTG V     
Sbjct: 61  ARDIAQVVADDLEGSGLFRAIPENAFISPITSFDSPVQYADWKAINAQALVTGSVSVASD 120

Query: 122 DRLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
            RL V+FRL+DV     +  G +F +S +SWR++ H ++D +Y  ITGE G F+SR++FV
Sbjct: 121 GRLVVKFRLFDVFSDAPLGKGLQFVASQSSWRRMGHKVADAVYSRITGEGGYFDSRVVFV 180

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           SE+      +  L +MD DGAN+++LT S   I+  PRFSP   +V Y +Y         
Sbjct: 181 SETGPKNARQKRLAIMDYDGANVQFLTDS-SAIVLAPRFSPTGDRVLYTSYATGRPQITL 239

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L    +            M  APRFS +G+  + S+      DIY  DL S A  RLT T
Sbjct: 240 LDVNSVRSQGLGSAQGGEMSFAPRFSPDGRSVVFSLTNGGNSDIYRRDLSSGAQTRLTAT 299

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I  + S+SPD  QIVFESDR G +QLYVM + G + +RIS      Y  PVWSP+GDL
Sbjct: 300 PAIETAPSFSPDGRQIVFESDRSGSQQLYVMSATGGEARRISF-GPGRYGTPVWSPRGDL 358

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLY 419
           IAFTK +  +F IGVM+ DGS+ERLL      ++PTWSP+GR ++F+R+  G  G   LY
Sbjct: 359 IAFTKQNQGRFHIGVMRTDGSEERLLTSSFLDESPTWSPNGRVIMFTRETSGAGGAPSLY 418

Query: 420 SIDLNGRNETLINTPAYASDPQWVGFM 446
           S+D++GRN   + TP  ASDP W   +
Sbjct: 419 SVDISGRNLRRVPTPGAASDPAWSPLL 445


>gi|170741556|ref|YP_001770211.1| beta-propeller repeat-containing to-pal system protein TolB
           [Methylobacterium sp. 4-46]
 gi|168195830|gb|ACA17777.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           sp. 4-46]
          Length = 442

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 173/431 (40%), Positives = 249/431 (57%), Gaps = 8/431 (1%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L LVL G   P +    ++V  +   + P+ IA   F     L   VS +V+ +L+RS
Sbjct: 17  LWLFLVLTG---PAAAQLNLRVG-SGGAFQPMPIAVADFAGDPSLAPLVSGIVANNLKRS 72

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F  I +  F +   N D+ P F  W   GAQ LVTGRV ++    ++ EFRLWDV   
Sbjct: 73  GYFVPIDRARFPETP-NFDAAPNFAAWKEAGAQGLVTGRVTRDASGGVKAEFRLWDVLSG 131

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q+IG+++     + R++ H ISD +Y  ITG  G F++R+ FV ES      +  L +M
Sbjct: 132 QQMIGQQYAGGSGNSRRMGHLISDAVYTKITGIGGFFDTRVAFVDESGSKERRRKRLAIM 191

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DGAN+RYLT S +  +  PR+SP  Q + Y +       RV +++     A + I   
Sbjct: 192 DQDGANVRYLT-SGEAAVVAPRYSPATQDITYMSQTTGQQPRVQVINLETG-ARQVIPTH 249

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             M  +PRFS +G+R ++S Q      IY +DL S A  R+TN   I+ S S+SPD  +I
Sbjct: 250 AEMSTSPRFSPDGRRIVMSDQDGGNASIYVMDLASKAQTRITNANAIDTSPSFSPDGREI 309

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VFESDR G++Q+YVM ++GS+ +RIS   + S   P WSP+GD IAFT+     FAI +M
Sbjct: 310 VFESDRGGQQQIYVMGADGSNPRRISF-GDGSASQPAWSPRGDYIAFTRQRRGSFAICIM 368

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K DGS ER+L E  + + PTW+P+G+ ++F R   G  G KLY +D+ GR E  + TP+Y
Sbjct: 369 KPDGSGERVLTEGFHNEGPTWAPNGQYVMFFRDPGGQAGGKLYMVDVTGRVEQPVPTPSY 428

Query: 437 ASDPQWVGFMD 447
           ASDP W   +D
Sbjct: 429 ASDPTWSPLLD 439


>gi|108755186|emb|CAK32578.1| periplasmic component of the Tol biopolymer transport system
           [uncultured organism]
          Length = 449

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 182/440 (41%), Positives = 264/440 (60%), Gaps = 13/440 (2%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----IDELGGKVSEVVSK 71
            + +L V+       S  A +++        P+ IA T F+         G  ++ VV+ 
Sbjct: 13  WIPILAVIFVLGGSWSASAELRIDITRGTVEPLPIAVTDFLGTAADETRFGRDIASVVAA 72

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+RS +F  I   +F Q  T   ++PRF DW  + AQ LV GR       RLRVEFRLW
Sbjct: 73  DLERSGLFLPIDSRAFIQTGTALSTLPRFADWRVINAQALVQGRTQIVEDGRLRVEFRLW 132

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           DV   +Q++G ++ ++P  WR++AH I+D I++ +TGE G F++RI++++E         
Sbjct: 133 DVFAEQQMVGFEYHTAPNGWRRVAHIIADAIFKRVTGEDGYFDTRIVYIAERGPQDRRIK 192

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +MD+DG N R+LT   + ++  PRFSP  Q++ Y +Y    + RVY+ +    R  +
Sbjct: 193 RLAIMDQDGENHRFLTDG-NTLVLTPRFSPTLQEIIYLSY-YSGVPRVYIFNIDTGRE-E 249

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +G+F  M  APRFS++GK  ++S+ KD   +IY++DL + A +RLT    I+ S S+  
Sbjct: 250 IVGDFPGMTFAPRFSADGKAVIMSMAKDGNSEIYTLDLSTRAVQRLTFHSAIDTSPSFDA 309

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +S ++VF SDR G +QLYVM  +GS+ +RIS  K   Y  PVWSP+GDLIAFTK    +F
Sbjct: 310 NSGKVVFNSDRGGTQQLYVMDGDGSNVRRISFGK-GRYATPVWSPRGDLIAFTKIHKGRF 368

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-----KDGDTGSKLYSIDLNGR 426
            IGVM+ DGS+ERLL ED  ++APTW+P+GR L+F R+     K G   S+LYSIDL G 
Sbjct: 369 FIGVMRTDGSEERLLAEDFLVEAPTWAPNGRVLMFFRQEPSDAKGGGGRSRLYSIDLTGY 428

Query: 427 NETLINTPAYASDPQWVGFM 446
           NE  I TP  ASDP W   +
Sbjct: 429 NEREIITPLDASDPAWSPLI 448


>gi|110679376|ref|YP_682383.1| translocation protein TolB [Roseobacter denitrificans OCh 114]
 gi|118574597|sp|Q167Z6|TOLB_ROSDO RecName: Full=Protein tolB; Flags: Precursor
 gi|109455492|gb|ABG31697.1| TolB protein, putative [Roseobacter denitrificans OCh 114]
          Length = 443

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 160/445 (35%), Positives = 259/445 (58%), Gaps = 14/445 (3%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF----VKVATNSANYSPVSIAFTKFVSID----ELG 62
           ++ +I +   ++ +   F   + A     +++        P+  A   F +      ++ 
Sbjct: 1   MSFQIRVFTAILAVLSLFTAPVLAQNSGPLRIEITEGVIEPLPFALPVFEAETADAADVA 60

Query: 63  GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
            ++++V++ DL  + +F  I  D+F   +++  +  ++ DW ++ AQ L+TG V  +G +
Sbjct: 61  AQITQVIAADLTGTGLFRQIEPDAFISTVSSFAAPIQYADWKAINAQALITGAVAVQG-N 119

Query: 123 RLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
           +L V+FRL+DV    ++  G +F ++P  WR++AH ++D +Y  ITGE G F+SR+++VS
Sbjct: 120 QLNVKFRLYDVFSGAEMGDGLQFSATPDGWRRMAHKVADAVYSRITGEGGYFDSRVVYVS 179

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E+      +  L +MD DGAN++YLT S   I+  PRFSP+ Q++ Y +Y+     R+Y+
Sbjct: 180 ETGTKDARQKRLAIMDYDGANVKYLTDSSS-IVLAPRFSPDGQRILYTSYETG-FPRIYV 237

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +D    +         +M  APRF+ +G+  + S+ +    DIY +++   +  RLT+  
Sbjct: 238 LDVTSLQRRGLESQEGTMSFAPRFAPDGQTIVFSLSQGGNTDIYRMNVNGGSATRLTSAP 297

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I  + SYSPD +QIVFESDR G +QLYVM +NG + +RIS      Y  PVWSP+GDL+
Sbjct: 298 SIETAPSYSPDGTQIVFESDRSGSQQLYVMPANGGEARRISF-GPGRYGTPVWSPRGDLV 356

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYS 420
           AFTK +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++FSR+  G  G   LYS
Sbjct: 357 AFTKQNAGRFHIGVMRLDGSEERLLTASFLDEGPTWSPNGRVIMFSRETQGAQGRATLYS 416

Query: 421 IDLNGRNETLINTPAYASDPQWVGF 445
           +D+ GRN   + TP   SDP W   
Sbjct: 417 VDITGRNLRPVRTPEGGSDPSWSPL 441


>gi|163733521|ref|ZP_02140964.1| translocation protein TolB precursor [Roseobacter litoralis Och
           149]
 gi|161393309|gb|EDQ17635.1| translocation protein TolB precursor [Roseobacter litoralis Och
           149]
          Length = 443

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 161/445 (36%), Positives = 254/445 (57%), Gaps = 14/445 (3%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF----VKVATNSANYSPVSIAFTKFVSIDE----LG 62
           ++ +I +   ++ +   F     A     +++        P+  A   F +       + 
Sbjct: 1   MSFQIRVFTAILAVLSLFTAPALAQNSGPLRIEITEGVIEPLPFALPVFEAETADATGVA 60

Query: 63  GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
            +++EV+S DL  + +F  I   +F   +++  +  ++ DW ++ AQ L+TG V  +G +
Sbjct: 61  AQITEVISADLTGTGLFREIEPGAFISNVSSFAAPIQYADWKAINAQALITGAVAVQG-N 119

Query: 123 RLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
           +L V+FRL+DV    ++  G +F ++P  WR++AH ++D +Y  ITGE G F+SR+++VS
Sbjct: 120 QLNVKFRLYDVFSGAEMGDGLQFSATPEGWRRMAHKVADAVYSRITGEGGYFDSRVVYVS 179

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E+      +  L +MD DGAN++YLT S   I+  PRFSP+ Q+V Y +Y+     R+Y+
Sbjct: 180 ETGTKDARQKRLAIMDYDGANVKYLTDSSS-IVLAPRFSPDGQRVLYTSYETG-FPRIYV 237

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +D    +         +M  APRF+ +G+  + S+ +    DIY +++      RLT   
Sbjct: 238 LDVTSVQRRALESQEGTMSFAPRFAPDGETIVFSLSQGGNTDIYRMNVNGGPATRLTAAP 297

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I  + SYSPD +QIVFESDR G +QLYVM ++G + +RIS      Y  PVWSP+GDL+
Sbjct: 298 SIETAPSYSPDGTQIVFESDRSGSQQLYVMPASGGEARRISF-GPGRYGTPVWSPRGDLV 356

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYS 420
           AFTK +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++FSR+  G  G   LYS
Sbjct: 357 AFTKQNAGRFHIGVMRLDGSEERLLTASFLDEGPTWSPNGRVIMFSRETQGAQGRATLYS 416

Query: 421 IDLNGRNETLINTPAYASDPQWVGF 445
           +D+ GRN   + TP   SDP W   
Sbjct: 417 VDITGRNLRPVRTPEGGSDPSWSPL 441


>gi|254461647|ref|ZP_05075063.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacterales
           bacterium HTCC2083]
 gi|206678236|gb|EDZ42723.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacteraceae
           bacterium HTCC2083]
          Length = 439

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 164/441 (37%), Positives = 258/441 (58%), Gaps = 10/441 (2%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI----DELGGKVS 66
           + +K  + ++ + +      + +  +++        P+  A   FV+     +E   +++
Sbjct: 1   MTLKKLMAVVAICVLPLTAWAQNGPLRIEITEGVVEPMPFAAPNFVAESGAANEFAERLA 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL  + +F  + +D++  +IT+ D+  ++ DW ++ AQ LVTG V   G + L V
Sbjct: 61  RVVVSDLAGTGLFREVPRDAYISQITSFDAPVQYVDWKAINAQALVTGAVNVSGSN-LSV 119

Query: 127 EFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           +FR++DV    +I  G +F  +   WR++AH ++D +Y  ITGE+  F+SR+++VSE   
Sbjct: 120 KFRVYDVFSGTEIGSGLQFAGTTQGWRRMAHKVADQVYARITGEQPYFDSRVVYVSEQGP 179

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
               +  L +MD DGAN++YLT   + ++  PRFSP   +V Y +Y+     R+Y+++  
Sbjct: 180 KDKRRKRLAIMDYDGANVQYLT-GSEHLVLAPRFSPTGDRVLYTSYETG-FPRIYVLEVG 237

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +         SM  APRFS +G+  + S+ +    DI+ +D+ S ++ RLT+   I  
Sbjct: 238 SVKRRVLESQDGSMSFAPRFSPDGRTVVYSLARGGNTDIFRMDVASGSSVRLTSGPAIET 297

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + SYSPD S+IVFESDR G +Q+Y+M +NG + KRIS  K   Y  PVWSP+GDLIAFTK
Sbjct: 298 APSYSPDGSRIVFESDRSGSQQIYIMSANGGEAKRISFGK-GRYGTPVWSPRGDLIAFTK 356

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSIDLN 424
            S  +F IGVM+ DGS+ERLL      + PTWSP+GR ++F+R+  G  GS  LYS+D++
Sbjct: 357 QSKGRFHIGVMRTDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGSAGSASLYSVDIS 416

Query: 425 GRNETLINTPAYASDPQWVGF 445
           GRN   I T   ASDP W   
Sbjct: 417 GRNLKRIPTEGGASDPSWSPL 437


>gi|170747178|ref|YP_001753438.1| beta-propeller repeat-containing to-pal system protein TolB
           [Methylobacterium radiotolerans JCM 2831]
 gi|170653700|gb|ACB22755.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           radiotolerans JCM 2831]
          Length = 445

 Score =  429 bits (1102), Expect = e-118,   Method: Composition-based stats.
 Identities = 169/431 (39%), Positives = 251/431 (58%), Gaps = 5/431 (1%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
            L  +  L+         A +++     N+ P+ IA   F     L G VS VV+ DL+R
Sbjct: 17  RLIAVFTLLTAVLAGPAQAQLQLRIGGGNFQPMPIAIADFGGDPSLAGLVSGVVTNDLRR 76

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  F  +    F ++  N D+ P F+ W + G Q LVTGRV++EG  R++VEFRLWDV +
Sbjct: 77  SGYFTPLDHARFPEQP-NFDAAPNFEKWRATGVQGLVTGRVVREG-GRVKVEFRLWDVTN 134

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            +Q+ G+++ +  A+ R+  H ISD +Y  ITG    F+SRI FV E+      +  L V
Sbjct: 135 GQQMTGQQYGTDAANVRRTGHLISDGVYTKITGLGPWFDSRIAFVDETGPKENRRKRLMV 194

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD+DGAN+R +T     I+  PR+SP  Q +A+         RV +++       + +GN
Sbjct: 195 MDQDGANVRAITTGEMSIV-APRYSPATQDIAFMAQATGHQPRVQMINLETGS-RQALGN 252

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             SM  +PRFS +G++ ++SVQ+    DI ++DL S A   +TN + I+ S +YSPD SQ
Sbjct: 253 VDSMSASPRFSPDGRKIVMSVQQGGNADIVTMDLASKAQRSITNGMAIDTSPTYSPDGSQ 312

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           I FESDR G +Q+YVM ++GS+  RI+     S   P +SP+GDLIA+T+     FAI V
Sbjct: 313 IAFESDRGGSQQVYVMGADGSNPHRITF-GPGSASQPAFSPRGDLIAYTRQRNGGFAICV 371

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            K DGS ER+L E  + + PT++P+G+ ++F R   G  G KL+ +D+ G+ E  + TPA
Sbjct: 372 SKPDGSGERVLTEGFHNEGPTFAPNGQYVLFFRDPGGQGGGKLFMVDITGKVEQPVPTPA 431

Query: 436 YASDPQWVGFM 446
           YASDP W   +
Sbjct: 432 YASDPTWSPLL 442


>gi|315498693|ref|YP_004087497.1| tol-pal system beta propeller repeat protein tolb [Asticcacaulis
           excentricus CB 48]
 gi|315416705|gb|ADU13346.1| Tol-Pal system beta propeller repeat protein TolB [Asticcacaulis
           excentricus CB 48]
          Length = 436

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 169/432 (39%), Positives = 245/432 (56%), Gaps = 5/432 (1%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           +     L L G        A ++        +P+ IA     S  +LG K++ VV  DL+
Sbjct: 9   VAFATFLALTGAPLAAFAQAPIRAEVAEGVIAPMPIAIDIESSGSDLGDKITRVVMADLE 68

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           RS  F  I  ++F ++    D+ P F  W ++ AQ L  G    +G+ RL+V+FRLWDV 
Sbjct: 69  RSGFFKPIDPNAFIEQSVGIDATPTFASWKTINAQALANGAARVDGEGRLQVDFRLWDVF 128

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ++G+   ++P +WR+IAH I+D IY+ +TGE+G F++RI+FV+ES   G     L 
Sbjct: 129 SEKQLLGQSVTATPENWRRIAHKIADAIYEKLTGEEGYFDTRIVFVAESGARGKRVKRLA 188

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD+DGAN  YLT      +  PRFS + Q+VAY     ED  R+Y+ +    R  + +G
Sbjct: 189 IMDQDGANPSYLTDG-SYKVMTPRFSADSQEVAYMVLR-EDSARIYVFNIETGRQ-EAVG 245

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             + M+ APRFS +G +   SV +    DIY +DL++ AT R+T    I+ S S+SPD S
Sbjct: 246 QIKGMVFAPRFSPDGSKLAYSVAQGGNTDIYVMDLRTRATRRVTTDPGIDTSPSFSPDGS 305

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            IVF SDR G  QLY M ++GS  +RIS      Y  PV+SP+GD IAFTK SG +F+IG
Sbjct: 306 TIVFNSDRGGSPQLYAMNADGSGVRRISFGG-GIYSTPVFSPKGDKIAFTKQSGGRFSIG 364

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           VM   G  E+LL      + PTW+P+GR ++F R+  G     L+ ++ +GR E  +   
Sbjct: 365 VMDAGGGNEKLLTSSFLEEGPTWAPNGRYIMFFREPPGAL-PSLWMVEASGRIERQVPYS 423

Query: 435 AYASDPQWVGFM 446
             ASDP W   +
Sbjct: 424 GGASDPAWSPRL 435


>gi|254564124|ref|YP_003071219.1| protein tolB [Methylobacterium extorquens DM4]
 gi|254271402|emb|CAX27415.1| protein tolB precursor [Methylobacterium extorquens DM4]
          Length = 446

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 169/414 (40%), Positives = 248/414 (59%), Gaps = 3/414 (0%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
            A +++   S  + P+ IA   F     LG  V+ V++ +L+RS  F  + +  F +   
Sbjct: 33  RAQLQLRIGSGAFQPMPIAVADFAGDASLGTLVASVITNNLRRSGYFTPLEKGRFPENP- 91

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
           + D+ P F+ W   G Q LVTGRV ++   RL V FRLWDV   +QI G+++ +  A+ R
Sbjct: 92  SFDAAPNFEAWKGAGVQALVTGRVGRDASGRLTVAFRLWDVASGQQITGQQYGTDVANAR 151

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +  H +SD +Y  +TG    F+SR+ FV ES      +  L VMD+DGAN+R LT   D 
Sbjct: 152 RTGHLVSDAVYTKVTGLGPWFDSRVAFVDESGPKENRRKRLMVMDQDGANVRALTGGGDV 211

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +  PR+SP  Q +A+ T       +V ++D    +  + +GNF SM  +PRFS +G+R 
Sbjct: 212 SVVAPRYSPAGQDIAFMTQAPGQQPKVQMIDLETGK-RQTVGNFASMSASPRFSPDGRRL 270

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           ++SVQ+    DI +VDL S A   +T  L I+ S SY+PD SQIVFESDR G +Q+YVM 
Sbjct: 271 VMSVQQGGNADIVTVDLASKAQTPVTQGLAIDTSPSYAPDGSQIVFESDRGGSQQIYVMG 330

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           ++GS+ +R+S   E S   P WSP+GDLIAFT+     FAI VMK DGS ER+L E  + 
Sbjct: 331 ADGSNPRRLSF-GEGSASQPAWSPRGDLIAFTRQRKGGFAICVMKPDGSGERVLTEGFHN 389

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           ++PT++P+G+ ++F R   G  G KLY +D+ G+ E  + TP++ASDP W   +
Sbjct: 390 ESPTFAPNGQYVMFFRDPGGQGGGKLYMVDITGKVEQPVPTPSFASDPTWSPLL 443


>gi|126728386|ref|ZP_01744202.1| translocation protein TolB precursor [Sagittula stellata E-37]
 gi|126711351|gb|EBA10401.1| translocation protein TolB precursor [Sagittula stellata E-37]
          Length = 432

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 170/434 (39%), Positives = 254/434 (58%), Gaps = 9/434 (2%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGG----KVSEVVSKDL 73
            +   +  G  P      +++  +     P+ IA   FV+          ++S VV++DL
Sbjct: 1   MMAFAVFQGVLPAVAQEPLRLEIDRGIVEPMPIAIPSFVAETPAAQEYADQLSRVVAEDL 60

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
             + +F  I +D+   +++   +  +F DW ++ AQ LVTG V  +G  R+ V+FR WDV
Sbjct: 61  VGTGLFREIPRDAHISRVSTFAAPVQFADWKAINAQALVTGAVSADGSGRVVVKFRAWDV 120

Query: 134 KDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
              +++  G +F SS   WR++AH ++D +Y  +TGE   F+SR++FVSE+      +  
Sbjct: 121 FAERELGEGMQFASSADGWRRLAHKVADQVYSRLTGESPYFDSRVVFVSETGPKDQRQKR 180

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L +MD DGAN++YLT S   I+  PRFSP   +V Y +Y      R++++D    ++   
Sbjct: 181 LAIMDYDGANVQYLTDSSS-IVLAPRFSPTGGQVLYTSYATG-FPRIHILDVGAVQSRIL 238

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
             N   M  APRFS +G+  + S+ +    DI+++D+ S AT RLT+T  I  + S+SPD
Sbjct: 239 QANEGVMSFAPRFSPDGRMVVYSMTQGSNTDIWAMDVASGATRRLTSTPAIETAPSFSPD 298

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            S+IVFESDR G +QLYVM ++G +  RIS   E  Y  PVWSP+GD IAFTK +  +F 
Sbjct: 299 GSRIVFESDRSGTQQLYVMPASGGEGTRISF-GEGRYGTPVWSPRGDRIAFTKQNKGRFH 357

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLI 431
           IGVM  DGS+ERLL      + PTW+P+GR ++FSR+  G  G S LYS+D++GRN   +
Sbjct: 358 IGVMNTDGSEERLLTASFLDEGPTWAPNGRVIMFSRETQGAQGASALYSVDISGRNLRRV 417

Query: 432 NTPAYASDPQWVGF 445
            TPA ASDP W   
Sbjct: 418 RTPAGASDPSWGPL 431


>gi|85706711|ref|ZP_01037803.1| translocation protein TolB precursor [Roseovarius sp. 217]
 gi|85668769|gb|EAQ23638.1| translocation protein TolB precursor [Roseovarius sp. 217]
          Length = 440

 Score =  428 bits (1100), Expect = e-117,   Method: Composition-based stats.
 Identities = 168/443 (37%), Positives = 252/443 (56%), Gaps = 11/443 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHA--FVKVATNSANYSPVSIAFTKFVSID----ELGGKVS 66
           M+  + LL  L     P        +++        P+  A   FVS      ELG  ++
Sbjct: 1   MRFMMTLLAALTLWAMPALAQGNGPLRIEITEGVIEPMPFAAPDFVSDSAAGQELGRNIA 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            V++ DL  + +F  I  ++   +IT+ +S  ++ DW ++ AQ L+TG V  +G  R+  
Sbjct: 61  SVIAADLSGTGLFRQIPSEAHISRITSFESPVQYADWRAVNAQALITGAVSTDGAGRIVA 120

Query: 127 EFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           +FR++DV   +++  G++   +   WR+IAH ++D +Y  ITGE G F+SR++FV+ES  
Sbjct: 121 KFRIYDVFSGQELGSGQQLVGTQDGWRRIAHKVADQVYSRITGEGGYFDSRVVFVAESGP 180

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  L +MD DGAN +YLT S   I+  PRFSP   +V Y +Y+     R+Y++D  
Sbjct: 181 KDQRAKRLAIMDYDGANTQYLTDSAS-IVLAPRFSPTGDRVLYTSYETG-FPRIYVLDVA 238

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +      +M  APRF+ NG+  + S+ +    D+Y++D+ S A+ RLT    I  
Sbjct: 239 NVGRRELPTLDGTMSFAPRFAPNGRTVVYSLTQGGNTDLYTMDVGSGASTRLTTAPSIET 298

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + SY+PD SQIVFESDR G  QLYVM + G + +RIS   E  Y  PVWSP+GDL+AFTK
Sbjct: 299 APSYNPDGSQIVFESDRSGTPQLYVMSAGGGEARRISF-GEGRYGTPVWSPRGDLVAFTK 357

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLN 424
            S  +F IGVM+ DGS+ERLL      + PTW+P+GR ++F+R+  G  G + LYS+D+ 
Sbjct: 358 QSKGRFHIGVMRTDGSEERLLTASFLDEGPTWAPNGRVIMFTRETQGAQGQASLYSVDIT 417

Query: 425 GRNETLINTPAYASDPQWVGFMD 447
           GRN   + T   ASDP W    +
Sbjct: 418 GRNLKAVPTNTGASDPSWSPLQN 440


>gi|254512269|ref|ZP_05124336.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacteraceae
           bacterium KLH11]
 gi|221535980|gb|EEE38968.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacteraceae
           bacterium KLH11]
          Length = 439

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 170/442 (38%), Positives = 252/442 (57%), Gaps = 11/442 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIH-AFVKVATNSANYSPVSIAFTKFVSIDELG----GKVSE 67
           MK+   L + L     P       +++  +     P+  A   FV            +S 
Sbjct: 2   MKLLTSLFVGLTLLAAPVHAQSGPLRLEIDEGIIEPLPFAVPNFVPDGPAAAQYAQDISR 61

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V+  DL  + +F  IS D+F  ++++ D+  +F DW ++ AQ LVTG V   GK RL V 
Sbjct: 62  VIVSDLTGTGLFREISADAFISRVSSFDAPVQFPDWKAINAQALVTGAVNVSGK-RLTVR 120

Query: 128 FRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           FR+WDV   +++  G +F  +   WR++AH ++D +Y  ITGE   F+SR+ FVSES   
Sbjct: 121 FRVWDVFSGQELGNGLQFAGTTDGWRRMAHKVADQVYSRITGEGAYFDSRVAFVSESGPK 180

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L +MD DGAN++YLT S   I+  PRFSP+  ++ Y +Y+     R+YL+D   
Sbjct: 181 DQRRKRLAIMDYDGANVQYLTDS-AAIVLAPRFSPSGDRLLYTSYETGQP-RIYLLDVGR 238

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +  +      +M  +PRFS +G+  + S+ +    D++ +DL +  + RLTNT  I  +
Sbjct: 239 VQRQELPTEAGTMSFSPRFSPDGRSIVYSLSQGGNTDLWKMDLATRQSVRLTNTPAIETA 298

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            SYSPD SQIVFESDR G  QLY+M + G +  RIS   +  Y  PVWSP+GDLIAFTK 
Sbjct: 299 PSYSPDGSQIVFESDRSGSPQLYIMPATGGEATRISF-GQGRYGTPVWSPRGDLIAFTKQ 357

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNG 425
           +  +F IGVM+ +G +ERLL      + PTWSP+GR ++F+R+  G +G S LYS+D++G
Sbjct: 358 NKGRFHIGVMRTNGDEERLLTASFLDEGPTWSPNGRVIMFTRETQGASGRSALYSVDISG 417

Query: 426 RNETLINTPAYASDPQWVGFMD 447
           RN   + TP   SDP W    +
Sbjct: 418 RNLRPVRTPDGGSDPSWGPLQN 439


>gi|163854156|ref|YP_001642199.1| beta-propeller repeat-containing to-pal system protein TolB
           [Methylobacterium extorquens PA1]
 gi|218533101|ref|YP_002423917.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           chloromethanicum CM4]
 gi|240141615|ref|YP_002966095.1| protein tolB precursor [Methylobacterium extorquens AM1]
 gi|163665761|gb|ABY33128.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           extorquens PA1]
 gi|218525404|gb|ACK85989.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           chloromethanicum CM4]
 gi|240011592|gb|ACS42818.1| protein tolB precursor [Methylobacterium extorquens AM1]
          Length = 446

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 168/414 (40%), Positives = 248/414 (59%), Gaps = 3/414 (0%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
            A +++   S  + P+ IA   F     LG  V+ V++ +L+RS  F  + +  F +   
Sbjct: 33  RAQLQLRIGSGAFQPMPIAVADFAGDASLGTLVASVITNNLRRSGYFTPLEKGRFPENP- 91

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
           + D+ P F+ W   G Q LVTGRV ++   RL V FRLWDV   +QI G+++ +  A+ R
Sbjct: 92  SFDAAPNFEAWKGAGVQALVTGRVGRDASGRLTVAFRLWDVASGQQITGQQYGTDVANAR 151

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +  H +SD +Y  +TG    F+SR+ FV ES      +  L VMD+DGAN+R LT   D 
Sbjct: 152 RTGHLVSDAVYTKVTGLGPWFDSRVAFVDESGPKENRRKRLMVMDQDGANVRALTGGGDV 211

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +  PR+SP  Q +A+ T       +V ++D    +  + +GNF SM  +PRFS +G+R 
Sbjct: 212 SVVAPRYSPAGQDIAFMTQAPGQQPKVQMIDLETGK-RQTVGNFASMSASPRFSPDGRRL 270

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           ++SVQ+    DI +VD+ S A   +T  L I+ S SY+PD SQIVFESDR G +Q+YVM 
Sbjct: 271 VMSVQQGGNADIVTVDIASKAQTPVTQGLAIDTSPSYAPDGSQIVFESDRGGSQQIYVMG 330

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           ++GS+ +R+S   E S   P WSP+GDLIAFT+     FAI VMK DGS ER+L E  + 
Sbjct: 331 ADGSNPRRLSF-GEGSASQPAWSPRGDLIAFTRQRKGGFAICVMKPDGSGERVLTEGFHN 389

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           ++PT++P+G+ ++F R   G  G KLY +D+ G+ E  + TP++ASDP W   +
Sbjct: 390 ESPTFAPNGQYVMFFRDPGGQGGGKLYMVDITGKVEQPVPTPSFASDPTWSPLL 443


>gi|220924307|ref|YP_002499609.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Methylobacterium nodulans ORS 2060]
 gi|219948914|gb|ACL59306.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacterium
           nodulans ORS 2060]
          Length = 442

 Score =  424 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 170/418 (40%), Positives = 244/418 (58%), Gaps = 5/418 (1%)

Query: 31  SIHAFVKVATN-SANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
              A + +      ++ P+ IA   F     L   V+ +V+ +L+RS  F  I +  F +
Sbjct: 26  PAEAQLNLRVGPGGSFQPMPIAVADFSGDPSLAPLVAGIVTSNLKRSGYFVPIEKARFPE 85

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
              N D+ PRF  W   GAQ LVTGRV ++    ++ EFRLWDV   +Q+IG+++  S A
Sbjct: 86  TP-NFDAAPRFAAWKEAGAQGLVTGRVSRDASGGIKAEFRLWDVLAGQQMIGQQYAGSAA 144

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           + R++ H ISD +Y  ITG  G F++RI FV ES      +  L +MD+DGAN+RYLT S
Sbjct: 145 NARRMGHLISDAVYTKITGIGGFFDTRIAFVDESGSKERRRKRLAIMDQDGANVRYLT-S 203

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            +  +  PR+SP  Q + Y +       RV +++     A + I     M  +PRFS +G
Sbjct: 204 GEAAVVAPRYSPATQDITYMSQITGQQPRVQVINLETG-ARQVIPTKAEMSTSPRFSPDG 262

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +R ++S Q      IY +DL S A  R+TN   I+ S S+SPD  +IVFESDR G++Q+Y
Sbjct: 263 RRLVMSDQDGGNASIYVMDLASKAQTRVTNANAIDTSPSFSPDGREIVFESDRGGQQQIY 322

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           VM ++GS+ +RIS   E S   P WSP+GD IAFT+     FAI +MK DGS ER+L E 
Sbjct: 323 VMGADGSNPRRISF-GEGSASQPAWSPRGDYIAFTRQRKGSFAICIMKPDGSGERVLTEG 381

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
            + + PTW+P+G+ ++F R   G  G KLY +D+ GR E  + TP+YASDP W   +D
Sbjct: 382 FHNEGPTWAPNGQYVLFFRDPGGQAGGKLYMVDITGRVEQPVPTPSYASDPSWSPLID 439


>gi|83943918|ref|ZP_00956375.1| translocation protein TolB precursor [Sulfitobacter sp. EE-36]
 gi|83954491|ref|ZP_00963202.1| translocation protein TolB precursor [Sulfitobacter sp. NAS-14.1]
 gi|83840775|gb|EAP79946.1| translocation protein TolB precursor [Sulfitobacter sp. NAS-14.1]
 gi|83845165|gb|EAP83045.1| translocation protein TolB precursor [Sulfitobacter sp. EE-36]
          Length = 440

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 162/439 (36%), Positives = 250/439 (56%), Gaps = 10/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI----DELGGKVSEV 68
             ++LCL L+        +    +++        P+  A   F        ++   ++ V
Sbjct: 4   RILSLCLALIGGVASVAQAQDGPLRIEITEGVIEPLPFAVPSFQPESGDAGQMAVDLARV 63

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           VS+DL  S +F  +   ++   +++ ++  ++ DW ++ AQ L+TG V   G + L V+F
Sbjct: 64  VSEDLVGSGLFREVPASAYISTVSDFNAPIQYADWKAINAQALITGAVSVSG-NTLNVKF 122

Query: 129 RLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           RL+DV    ++  G +F  +   WR++AH ++D +Y  ITGE G F+SR+++VSE+    
Sbjct: 123 RLYDVFSGAELGSGLQFSGTVDGWRRMAHKVADAVYSRITGEGGYFDSRVVYVSETGPKD 182

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L VMD DGAN+RYLT S   I+  PRFSP+  ++ Y +Y+     R+Y++D    
Sbjct: 183 DRAKRLAVMDYDGANVRYLTDSSS-IVLAPRFSPSGDRILYTSYESG-FPRIYVLDIGSV 240

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +         +M  APRFS +G   + S+ +    DIY++D+ +  + RLTNT  I  + 
Sbjct: 241 QRRVLESAEGTMSFAPRFSPSGNTVVYSLTQGGNTDIYTMDINTGQSTRLTNTPAIETAP 300

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SYSPD S+IVFESDR G +QLY+M + G +  RIS   E  Y  PVWSP+GDL+AFTK +
Sbjct: 301 SYSPDGSRIVFESDRSGSQQLYIMPATGGEATRISF-GEGRYGTPVWSPRGDLVAFTKQN 359

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGR 426
             +F IGVM+ DGS+ERLL      + PTW+P+GR ++F+R+  G  G S LYS+D++GR
Sbjct: 360 KGRFHIGVMRLDGSEERLLTASFLDEGPTWAPNGRVIMFARETQGAGGASSLYSVDISGR 419

Query: 427 NETLINTPAYASDPQWVGF 445
           N   + T    SDP W   
Sbjct: 420 NLKPVRTQEGGSDPSWSPL 438


>gi|254486268|ref|ZP_05099473.1| Tol-Pal system beta propeller repeat protein TolB [Roseobacter sp.
           GAI101]
 gi|214043137|gb|EEB83775.1| Tol-Pal system beta propeller repeat protein TolB [Roseobacter sp.
           GAI101]
          Length = 430

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 161/432 (37%), Positives = 249/432 (57%), Gaps = 10/432 (2%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI----DELGGKVSEVVSKDLQR 75
           +L+        +    +++        P+  A   F        ++   ++ VVS+DL  
Sbjct: 1   MLLCAVAGIAQAQQGPLRIEITEGVIEPLPFAVPSFQPESGEAGQMAVDLARVVSEDLVG 60

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F  I   +F   +++ ++  ++ DW ++ AQ L+TG V   G + L V+FRL+DV  
Sbjct: 61  SGLFREIPASAFISTVSDFNAPVQYADWKAINAQALITGAVNVSG-NTLSVKFRLYDVFS 119

Query: 136 RKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             ++  G +F  +   WR++AH ++D +Y  ITGE G F+SR+++VSE+      +  L 
Sbjct: 120 GAELGSGLQFQGTVDGWRRMAHKVADAVYSRITGEGGYFDSRVVYVSETGPKDGRQKRLA 179

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           VMD DGAN+RYLT S   I+  PRFSP   ++ Y +Y+     R+Y++D    +      
Sbjct: 180 VMDYDGANVRYLTDSTS-IVLAPRFSPTGDRILYTSYESG-FPRIYVLDIGSVQRRVLES 237

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              +M  APRFS +G+  + S+ +    DIY++D+ +  + RLTNT  I  + SYSPD S
Sbjct: 238 ADGTMSFAPRFSPSGQTVVYSLTQGGNTDIYTMDINTGQSVRLTNTPAIETAPSYSPDGS 297

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +IVFESDR G +QLY+M ++G + +RIS   E  Y  PVWSP+GDL+AFTK +  +F IG
Sbjct: 298 RIVFESDRSGTQQLYIMPASGGEAQRISF-GEGRYGTPVWSPRGDLVAFTKQNKGRFHIG 356

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINT 433
           VM+ DGS+ERLL      + PTW+P+GR ++F+R+  G  G S LYS+D++GRN   + T
Sbjct: 357 VMRLDGSEERLLTASFLDEGPTWAPNGRVIMFARETQGAGGSSSLYSVDISGRNLKPVRT 416

Query: 434 PAYASDPQWVGF 445
               SDP W   
Sbjct: 417 QEGGSDPSWSPL 428


>gi|163738349|ref|ZP_02145764.1| TolB-like protein [Phaeobacter gallaeciensis BS107]
 gi|161388270|gb|EDQ12624.1| putative protein tolB [Phaeobacter gallaeciensis BS107]
          Length = 446

 Score =  422 bits (1084), Expect = e-116,   Method: Composition-based stats.
 Identities = 166/451 (36%), Positives = 252/451 (55%), Gaps = 11/451 (2%)

Query: 3   LRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID--- 59
           +R ++A  L M   L    V+       +    +++        P+  A   FV      
Sbjct: 1   MRTYLAT-LVMGATLLGAAVMTSALPAQAQDGPLRIEITDGVIEPLPYAVPGFVPETPAA 59

Query: 60  -ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
            EL   +S V++ DL  + +F  +   +   K+T+ D+   + DW ++ AQ L+TG +  
Sbjct: 60  AELARDISRVIAADLSGTGLFREVPASAHISKVTDFDAAVSYADWKAVNAQALITGALSV 119

Query: 119 EGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            G +RL V FR  DV   K++  G +F  +   WR++AH ++D IY  ITGE G F+SR+
Sbjct: 120 NG-NRLTVRFRGHDVFAEKELGTGLQFSGTTDGWRRMAHKVADVIYSRITGESGYFDSRV 178

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +FVSES      +  L +MD DGAN++YLT S   I+  PRFSP   +V Y +Y+     
Sbjct: 179 VFVSESGPKNDRRKRLAIMDYDGANVQYLTNSAS-IVLAPRFSPTGDRVLYTSYESG-FP 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +++++D    +      +   M  APRF+ +G+  + S  +    DI+++++ + A  RL
Sbjct: 237 QIHVLDVGSVQRRVLSADNGIMSFAPRFAPDGRTVVYSQSQGGNTDIFTMNIDTGARTRL 296

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T+   I  + S+SPD SQIVFESDR G  QLYVM + G + +RIS      Y  PVWSP+
Sbjct: 297 TSAPSIETAPSFSPDGSQIVFESDRSGAPQLYVMAATGGEARRISF-GAGRYGTPVWSPR 355

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           GD+IAFTK +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++F+R+  G +G  
Sbjct: 356 GDMIAFTKQNKGRFHIGVMRTDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGASGRA 415

Query: 418 -LYSIDLNGRNETLINTPAYASDPQWVGFMD 447
            LYS+D++GRN   + TP  ASDP W    +
Sbjct: 416 LLYSVDVSGRNLKPVRTPDGASDPAWSPLQN 446


>gi|126725523|ref|ZP_01741365.1| translocation protein TolB precursor [Rhodobacterales bacterium
           HTCC2150]
 gi|126704727|gb|EBA03818.1| translocation protein TolB precursor [Rhodobacterales bacterium
           HTCC2150]
          Length = 444

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 177/451 (39%), Positives = 257/451 (56%), Gaps = 15/451 (3%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M +R   A    + + L L  V++G  F  S    +++        P+ IA   FV+ + 
Sbjct: 1   MKMR---AIARGLILALTLSPVMMGTGFAQS--GPLRIEVTDGVIEPLPIAVPSFVAENA 55

Query: 61  ----LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV 116
               L  ++S VV  DL  S +F  + +++    +TN D+  R+ DW ++ AQ LVTG V
Sbjct: 56  AAKNLAEEISRVVVSDLVGSGLFREVPREAHIANVTNFDAAVRYADWKAINAQGLVTGAV 115

Query: 117 IKEGKDRLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
             +GK R+ V+FRL+DV   K +  G +F  S  +WR++AH ++D  Y  ITGE   F+S
Sbjct: 116 SVQGK-RVIVKFRLFDVFSDKPLGDGLQFAGSTDAWRRMAHKVADAAYSRITGEGPYFDS 174

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R++FVSE+   G  +  L VMD DGAN++YLT S   I+  PRFSP   +V Y +Y+   
Sbjct: 175 RVVFVSEAGPKGQRQKRLAVMDYDGANVQYLTDSTS-IVLGPRFSPTGDRVLYTSYETGS 233

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             R+Y +D              ++  +PRF+ +G   + S  ++   DIY++ ++  A +
Sbjct: 234 P-RIYALDVASVSRRVLDSQAATLSFSPRFAPDGDTVVFSRSQNGNSDIYTMSVRGGAQK 292

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           RLT++  I+   SYSPD  QIVFESDR G +Q+YVM + G + KRIS      Y  PVWS
Sbjct: 293 RLTSSPAIDTGPSYSPDGKQIVFESDRSGNQQIYVMPAGGGEPKRISF-GAGRYGTPVWS 351

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P+GD IAFTK +  +F IGVM+ DGS+ERLL      + PTW+P+GR ++F R+  G  G
Sbjct: 352 PRGDYIAFTKQNKGRFHIGVMRTDGSEERLLTSSFLDEGPTWAPNGRVIMFMRETSGANG 411

Query: 416 -SKLYSIDLNGRNETLINTPAYASDPQWVGF 445
            S LYS+DL GRN   + TP  ASDP W   
Sbjct: 412 TSSLYSVDLTGRNLKRVPTPLGASDPAWSPL 442


>gi|146338269|ref|YP_001203317.1| protein tolB [Bradyrhizobium sp. ORS278]
 gi|146191075|emb|CAL75080.1| Protein tolB precursor [Bradyrhizobium sp. ORS278]
          Length = 376

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 171/378 (45%), Positives = 246/378 (65%), Gaps = 4/378 (1%)

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           ++ +L+RS  F  +   +F ++ITN D +P+F  W  L  Q L+TGR  ++   RL V+F
Sbjct: 2   ITNNLKRSGYFAPVDPAAFPERITNFDQLPQFNSWKPLSVQGLLTGRATRQSDGRLNVQF 61

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWDV   +Q   +++ ++P  WR+IAH ISD +Y ++ GEKG F+SR++FV ES  S  
Sbjct: 62  RLWDVNSGQQSAAQQYVTAPEYWRRIAHIISDQVYTALLGEKGYFDSRVVFVDESGPSER 121

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L +MD+DGAN+RYLT   D ++  PRFSP+ Q++ Y  +   D  +VYL +    +
Sbjct: 122 RVKRLALMDQDGANVRYLTRGSD-LVLTPRFSPSSQEITYMEFGQGDP-KVYLFNIETGQ 179

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             + +GNF  M  +PRFS +G+R ++S+Q+    +++ +DL+S +T RLT+T  I+ S  
Sbjct: 180 -REIVGNFPGMSFSPRFSPDGQRIILSLQQGGNSNLFVMDLRSRSTTRLTDTPAIDTSPC 238

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           YSPD SQI FESDR GK Q+YVM ++G + +RIS   E SY  PVWSP+GD IAFTK  G
Sbjct: 239 YSPDGSQICFESDRGGKPQIYVMSASGGNAQRISF-GEGSYSTPVWSPRGDYIAFTKQGG 297

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +FAIG+MK DGS ER+L    + + PT+SP+GR L+F R   G  G  LY+ID++GR E
Sbjct: 298 GQFAIGIMKTDGSGERILTAGFHNEGPTFSPNGRVLMFFRDPGGTAGPSLYTIDVSGRFE 357

Query: 429 TLINTPAYASDPQWVGFM 446
             + TP YASDP W   +
Sbjct: 358 QKVPTPGYASDPAWSPLL 375


>gi|163742234|ref|ZP_02149622.1| translocation protein TolB precursor [Phaeobacter gallaeciensis
           2.10]
 gi|161384564|gb|EDQ08945.1| translocation protein TolB precursor [Phaeobacter gallaeciensis
           2.10]
          Length = 446

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 165/451 (36%), Positives = 252/451 (55%), Gaps = 11/451 (2%)

Query: 3   LRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID--- 59
           +R ++A  L M   L    V+       +    +++        P+  A   FV      
Sbjct: 1   MRTYLAT-LVMGATLLGAAVMTSALPAQAQDGPLRIEITDGVIEPLPYAVPGFVPETPAA 59

Query: 60  -ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
            EL   +S V++ DL  + +F  +   +   K+T+ D+   + DW ++ AQ L+TG +  
Sbjct: 60  AELARDISRVIAADLSGTGLFREVPASAHISKVTDFDAAVSYADWKAVNAQALITGALSV 119

Query: 119 EGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            G +RL V FR  DV   K++  G +F  +   WR++AH ++D IY  ITGE G F+SR+
Sbjct: 120 NG-NRLTVRFRGHDVFAEKELGTGLQFSGTTDGWRRMAHKVADVIYSRITGESGYFDSRV 178

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +FVSES      +  L +MD DGAN++YLT S   I+  PRFSP   +V Y +Y+     
Sbjct: 179 VFVSESGPKNDRRKRLAIMDYDGANVQYLTNSAS-IVLAPRFSPTGDRVLYTSYESG-FP 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +++++D    +      +   M  APRF+ +G+  + S  +    DI+++++ + A  RL
Sbjct: 237 QIHVLDVGSVQRRVLSADNGIMSFAPRFAPDGRTVVYSQSQGGNTDIFTMNIDTGARTRL 296

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T+   I  + S+SPD SQIVFESDR G  QLYVM + G + +RIS      Y  PVWSP+
Sbjct: 297 TSAPSIETAPSFSPDGSQIVFESDRSGAPQLYVMAATGGEARRISF-GAGRYGTPVWSPR 355

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           GD++AFTK +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++F+R+  G +G  
Sbjct: 356 GDMVAFTKQNKGRFHIGVMRTDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGASGRA 415

Query: 418 -LYSIDLNGRNETLINTPAYASDPQWVGFMD 447
            LYS+D++GRN   + TP  ASDP W    +
Sbjct: 416 LLYSVDVSGRNLKPVRTPDGASDPAWSPLQN 446


>gi|260576644|ref|ZP_05844631.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacter sp.
           SW2]
 gi|259021129|gb|EEW24438.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacter sp.
           SW2]
          Length = 445

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 170/439 (38%), Positives = 254/439 (57%), Gaps = 12/439 (2%)

Query: 16  NLCLLLVLIGGF-FPTSIHAF-VKVATNSANYSPVSIAFTKFVSIDELGGK----VSEVV 69
            +   L L GG  F     A  +++  N+    P+  A   FV+ +  G      +S V+
Sbjct: 10  AIAFSLALFGGVTFAQLAQAEPLRIELNNPVIEPMPFAVPDFVAENGGGEDYAAKISRVI 69

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           + DL  + +F  I   +   ++T+ D+   + DW ++ AQ L+TG V   G D++ V+FR
Sbjct: 70  AADLAGTGLFAEIPAAAHIARVTSFDAPVSYPDWKAINAQALITGAVQASG-DQIVVKFR 128

Query: 130 LWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           L+DV   +Q+  G +F  +  SWR++AH ++D  Y  ITGE G F+SR++FVSES     
Sbjct: 129 LFDVFSGQQMGEGLQFAGTAQSWRRMAHKVADAAYARITGEGGYFDSRVVFVSESGPKNQ 188

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L VMD DGAN+ YLT S   I+  PRFSP+  ++ + +Y      ++YLMD    +
Sbjct: 189 RAKRLGVMDYDGANVAYLTDSAS-IVLAPRFSPSGDRILFTSYTSG-FPQIYLMDVGSLQ 246

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                    +M  APRF+ +G+  + S+++    DIY+VD QS    +LT+   I  + S
Sbjct: 247 TRSLEEQPGTMTFAPRFAPDGRTVVFSLERGGNTDIYTVDTQSGTLSQLTDAPSIETAPS 306

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           YSPD S+IVFESDR G +QLYVM + G + +RIS +    Y  PVWSP+GD IAFTK + 
Sbjct: 307 YSPDGSKIVFESDRSGTQQLYVMSAGGGEPRRIS-NGAGRYGTPVWSPRGDYIAFTKQNE 365

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRN 427
            +F IGVM  DGS+E+LL      + PTW+P+GR ++F+R++ G+ G   LYS+D++GRN
Sbjct: 366 GRFHIGVMLTDGSEEKLLTASFLDEGPTWAPNGRVIMFTREQAGEGGQPALYSVDISGRN 425

Query: 428 ETLINTPAYASDPQWVGFM 446
              I+T   ASDP W   +
Sbjct: 426 LRQISTETPASDPAWSPLL 444


>gi|254477250|ref|ZP_05090636.1| Tol-Pal system beta propeller repeat protein TolB [Ruegeria sp.
           R11]
 gi|214031493|gb|EEB72328.1| Tol-Pal system beta propeller repeat protein TolB [Ruegeria sp.
           R11]
          Length = 446

 Score =  420 bits (1080), Expect = e-115,   Method: Composition-based stats.
 Identities = 174/451 (38%), Positives = 255/451 (56%), Gaps = 11/451 (2%)

Query: 3   LRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID--- 59
           +R ++A  L M   L    ++  G    +    +++        P+  A   FV      
Sbjct: 1   MRTYLAS-LAMGAALVGAAIMGTGQPVKAQDGPLRIEITDGVIEPLPYAVPDFVPETPAA 59

Query: 60  -ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
            EL  ++S V++ DL  + +F  I   +   KI+N DS   + DW ++ AQ L+TG +  
Sbjct: 60  AELAREISRVIAADLSGTGLFREIPASAHISKISNFDSPVSYADWKAINAQALITGGLSV 119

Query: 119 EGKDRLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            G +RL V FR  DV   K++  G +F  +   WR++AH ++D IY  ITGE G F+SR+
Sbjct: 120 NG-NRLTVRFRGHDVFAEKELGSGLQFAGTTDGWRRMAHKVADVIYNRITGESGYFDSRV 178

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +FVSES      +  L +MD DGAN++YLT S   I+  PRFSP   +V Y +Y+     
Sbjct: 179 VFVSESGPKNDRRKRLAIMDYDGANVQYLTNSAS-IVLAPRFSPTGDRVLYTSYESG-FP 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +++++D    +      +   M  APRF+ +G+  + S  +    DIY++D+ S A +RL
Sbjct: 237 QIHVLDVGSVQRRVLSSDNGIMSFAPRFAPDGRTVVYSQAQGGNTDIYTLDINSGARQRL 296

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T+   I  + SYSPD SQIVFESDR G  QLYVM ++G + +RIS      Y  PVWSP+
Sbjct: 297 TSAPSIETAPSYSPDGSQIVFESDRSGAPQLYVMPASGGEARRISF-GAGRYGTPVWSPR 355

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           GDLIAFTK +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++F+R+  G+ G  
Sbjct: 356 GDLIAFTKQNKGRFHIGVMRTDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGENGRA 415

Query: 418 -LYSIDLNGRNETLINTPAYASDPQWVGFMD 447
            LYS+D+ GRN   + TP  ASDP W    +
Sbjct: 416 LLYSVDITGRNLKPVRTPDGASDPAWSPLQN 446


>gi|300112858|ref|YP_003759433.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Nitrosococcus watsonii C-113]
 gi|299538795|gb|ADJ27112.1| Tol-Pal system beta propeller repeat protein TolB [Nitrosococcus
           watsonii C-113]
          Length = 428

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 114/435 (26%), Positives = 220/435 (50%), Gaps = 10/435 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG-GKVSEVVSK 71
           MK+   +L + +      ++ A + +       + + IA   F    ++    V+ V++ 
Sbjct: 1   MKVCFKILWLWMLMVAAQNVSAVLTIEITGGTEAALPIAIVPFQKEGKVPPEDVAAVIAA 60

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  F  + ++    +      I +FQDW  LG++ LV G+V   G DR  V F+L+
Sbjct: 61  DLARSGRFAPLPEEDLIARPHAASDI-QFQDWRRLGSEGLVIGKVSALGADRYEVSFQLF 119

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GIIK 190
           D+   +Q++G+++    A  R +AH I+D IY+++TGEKG F + I FV+ S  + G  +
Sbjct: 120 DIYKAEQLVGRRYQVPAAGLRHLAHQIADLIYETLTGEKGFFTTHIAFVTVSRAAHGAKQ 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L V D DG N   +  S++ I   P +SP+  ++AY +++      V++ + R  +  
Sbjct: 180 YALQVADVDGHNPHTILRSKEPI-LSPAWSPDGTQIAYVSFERRRS-EVFVQELRTGQ-R 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + + +F  +  AP +S +G++  + + K+   +IY  DL ++   RLT+   I+    ++
Sbjct: 237 QSVASFPGINSAPAWSPDGRKLALVLSKEGNPEIYIRDLATDRLTRLTHNTAIDTEPVWA 296

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   IVF SDR G+ QLY +  +G   +R++ +   +     ++P G  +A       +
Sbjct: 297 PDGKSIVFTSDRGGQPQLYQVPVSGGQAQRLTFEGAYNASA-SFAPNGRRLALIHGDKGQ 355

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           F I V+     + ++L +    ++P+++P+GR ++++    G  G  L ++  +GR    
Sbjct: 356 FHIAVLNLQSKELQVLTQTRMDESPSFAPNGRMILYATS--GPQGGVLAAVSTDGRVRQR 413

Query: 431 INTPAY-ASDPQWVG 444
           +        +P W  
Sbjct: 414 LAQQGDEVREPAWSP 428


>gi|310816577|ref|YP_003964541.1| translocation protein TolB precursor [Ketogulonicigenium vulgare
           Y25]
 gi|308755312|gb|ADO43241.1| translocation protein TolB precursor [Ketogulonicigenium vulgare
           Y25]
          Length = 442

 Score =  419 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 169/444 (38%), Positives = 245/444 (55%), Gaps = 13/444 (2%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKFV----SIDELGG 63
           +N  + L L   L G F      A    +++        P+ IA   F        E+  
Sbjct: 1   MNKFMALVLTAALAGPFAAMPALAQQGPLRITVTQGVIEPLPIAVPTFQAETAGAAEVAN 60

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           ++S +V++DL  S +F  +   SF       D    + DW ++  Q LVTG V   G ++
Sbjct: 61  QISRLVAQDLTGSGLFREVPASSFISNHAMFDQAVAYADWRAINVQGLVTGAVSVSG-NQ 119

Query: 124 LRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           L V+FRL+D+    ++  G +F  S   WR++AH +SD +Y  ITGE G F+SR++FV+E
Sbjct: 120 LTVKFRLYDIYTGAELGQGLQFNGSVQGWRRMAHKVSDAVYSRITGESGYFDSRVVFVAE 179

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S         + +MD DGAN++YLT +   ++  PRFSP   ++ Y +Y      R+ L+
Sbjct: 180 SGPKDNRLKRVAIMDYDGANVQYLTDANS-LVLAPRFSPTGAQILYTSYQSG-APRINLL 237

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D     A +       M  +PRFS +G   + S+      DIY  D+++    RLTN   
Sbjct: 238 DVASASARQLPTEVGEMAFSPRFSRDGGSVIYSLANGGNTDIYRTDIRTGGHTRLTNAPS 297

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I  S S SPD SQIVFESDR G  QLYVM +NG + +RIS   +  Y  PVWSP+GD+IA
Sbjct: 298 IETSPSLSPDGSQIVFESDRSGTTQLYVMGANGGEARRISF-GDGRYGTPVWSPRGDMIA 356

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSI 421
           FTK  G +F IGVM+ DGS+ERLL      + PTW+P+GR L+F+R+  G+T G  +YS+
Sbjct: 357 FTKQQGGRFHIGVMRTDGSEERLLTSSFLDEGPTWAPNGRMLMFTRETQGETGGPSIYSV 416

Query: 422 DLNGRNETLINTPAYASDPQWVGF 445
           D++GRN   + T ++ASDP W   
Sbjct: 417 DISGRNLRQVATGSFASDPSWGPL 440


>gi|84501652|ref|ZP_00999824.1| translocation protein TolB precursor [Oceanicola batsensis
           HTCC2597]
 gi|84390273|gb|EAQ02832.1| translocation protein TolB precursor [Oceanicola batsensis
           HTCC2597]
          Length = 443

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 163/419 (38%), Positives = 246/419 (58%), Gaps = 10/419 (2%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSID----ELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
            +++        P+  A   FV  +    E+  +++ VVS DL  + +F  I Q++   +
Sbjct: 29  PLRIEITEGVIEPLPFAVPDFVPENGASAEMAAQITRVVSDDLTGTGLFREIPQNAHIAR 88

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII-GKKFFSSPA 149
           +T+  S  ++ DW ++ AQ L+TG V   G DR+ V+FRL+DV   +++  G +F  + A
Sbjct: 89  VTSFSSPVQYADWKAINAQALITGAVGVTG-DRVNVKFRLYDVFSGQEMGDGLQFSGTTA 147

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            WR++AH ++D +Y  ITGE   F+SR+++VSE+      +  L +MD DGAN++YLT S
Sbjct: 148 GWRRMAHKVADAVYSRITGEGPYFDSRVVYVSETGPKNDRRKRLAIMDYDGANVQYLTDS 207

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              I+  PRFSP   +V Y +Y+     ++Y++D              +M  APRF  +G
Sbjct: 208 SS-IVLAPRFSPTGDRVLYTSYETG-FPKIYVLDVASVGRRTLNTPEGTMSFAPRFHPDG 265

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +  + S+ +    DI+S+D+ S  + RLT    I  + S+SPD SQIVFESDR G +QLY
Sbjct: 266 QTVVYSLTQGGNTDIFSLDINSGQSTRLTQAPSIETAPSFSPDGSQIVFESDRSGTQQLY 325

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +M   G +  RIS   +  Y  PVWSP+GDLIAFTK S  +F IGVM+ DGS+ERLL   
Sbjct: 326 IMPVGGGEPTRISF-GQGRYGTPVWSPRGDLIAFTKQSKGRFHIGVMRTDGSEERLLTAS 384

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSIDLNGRNETLINTPAYASDPQWVGFMD 447
              + PTW+P+GR ++F+R+  G+ GS  LYS+D++GRN   + T   ASDP W    D
Sbjct: 385 FLDEGPTWAPNGRVIMFTRETQGEQGSASLYSVDISGRNLKRVRTEGAASDPSWSPLQD 443


>gi|296535985|ref|ZP_06898130.1| tol-Pal system beta propeller repeat protein TolB [Roseomonas
           cervicalis ATCC 49957]
 gi|296263689|gb|EFH10169.1| tol-Pal system beta propeller repeat protein TolB [Roseomonas
           cervicalis ATCC 49957]
          Length = 434

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 172/419 (41%), Positives = 253/419 (60%), Gaps = 15/419 (3%)

Query: 38  VATNSANYSPVSIAFTKFVSID----ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
           +    A   P+ IA   F        +LG  ++ V++ +L+ S +F  + + ++ Q    
Sbjct: 19  IDITRARTDPIPIALPDFAGGSPQAQQLGQNITRVIANNLRNSGLFRPVERGAYIQTPEA 78

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
             + PRFQDW  +GAQ LVTGR   +G DR R+EFRLW+V   +Q+ G  + ++ A+WR+
Sbjct: 79  AAAAPRFQDWRVIGAQALVTGRAEPQG-DRARIEFRLWEVSSEQQLQGTAYTANAANWRQ 137

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           IAH ISD IY+ + GEKG F++RI++V+ES         L +MD+DG N R+LT    Q+
Sbjct: 138 IAHVISDVIYERMLGEKGYFDTRIVYVAESGPRDRRTRRLAIMDQDGENHRFLTDGSFQV 197

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
              PRF PN +++A+ +Y +    RVYL +    R  + +GNF+ M L+PRFS +G+  +
Sbjct: 198 -LTPRFHPNARQIAFMSYFNNQP-RVYLFNLDSGRQ-EVLGNFQGMTLSPRFSPDGRSVV 254

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +S  +    +IY VDL S    +LT+   +++S SYSPD SQIVF SDR G +QLYVM +
Sbjct: 255 LSSARGGDANIYVVDLASRRERQLTSGGGLDVSPSYSPDGSQIVFNSDRGGDQQLYVMDA 314

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            G   +RIS      Y  PVWSP+GDLIAFT+ SG +F IGVM+ DGS ER+L E  +++
Sbjct: 315 GGGGARRISF-GNGRYATPVWSPRGDLIAFTRISGGRFGIGVMRPDGSGERILSEGWSME 373

Query: 394 APTWSPSGRSLIFSRK------KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            P+++P+GR L F R+      + G   ++L  ID+ G NE  I TP  A+DP W   +
Sbjct: 374 GPSFAPNGRVLAFYRESQARDARGGGYSARLSMIDIAGFNERQIVTPTDATDPSWSPLL 432


>gi|259417642|ref|ZP_05741561.1| Tol-Pal system beta propeller repeat protein TolB [Silicibacter sp.
           TrichCH4B]
 gi|259346548|gb|EEW58362.1| Tol-Pal system beta propeller repeat protein TolB [Silicibacter sp.
           TrichCH4B]
          Length = 441

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 162/445 (36%), Positives = 252/445 (56%), Gaps = 14/445 (3%)

Query: 13  MKINLCLLLVLIGGFFPT-SIHAF---VKVATNSANYSPVSIAFTKFVSIDELGG----K 64
           M+  +  +L+ +    P  ++ A    +++        P+  A   F++           
Sbjct: 1   MRNAIATVLLGLAMLLPVGAVQAQDGPLRIEITDGVIEPLPFAVPDFIAESPAAAQYSAD 60

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           ++ V+++DL  S +F  I + ++    T+ D+   F DW ++ AQ L+TG V   G +R+
Sbjct: 61  IARVIAEDLVGSGLFREIPKVAYISPYTDFDAAVNFTDWKAINAQALITGSVSLSG-NRI 119

Query: 125 RVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            V FR +DV   +++  G +   +   WR+I H ++D IY  +TGE G F+SR++FVSE+
Sbjct: 120 TVRFRAYDVFAGQELGSGLQLSGTTDGWRRIGHKVADTIYSRLTGESGYFDSRVVFVSET 179

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                 K  L +MD DGAN++YLT S + I+  PRFSP   +V Y +Y+     +++++D
Sbjct: 180 GPKDDRKKRLAIMDYDGANVQYLTNS-ESIVLAPRFSPTGDRVLYTSYESG-FPQIHVLD 237

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +         SM  APRF+ NG   + S       D++S+D+ S   +RLT+   I
Sbjct: 238 VGRVQRRILSAGNGSMSFAPRFAPNGHTIVYSQSAGGNTDLFSMDINSGNPQRLTSAPSI 297

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + S+SPD SQ+VFESDR G  QLYVM  +G + KRIS   +  Y  PVWSP+GD IAF
Sbjct: 298 ETAPSFSPDGSQLVFESDRSGTSQLYVMPVSGGEAKRISF-GQGRYGTPVWSPRGDYIAF 356

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSID 422
           TK +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++F+R+  G +G ++LYS+D
Sbjct: 357 TKQNAGRFHIGVMRTDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGASGQARLYSVD 416

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           ++GRN   + TP  ASDP W    +
Sbjct: 417 ISGRNLKPVKTPDGASDPSWSPLQN 441


>gi|254454187|ref|ZP_05067624.1| Tol-Pal system beta propeller repeat protein TolB [Octadecabacter
           antarcticus 238]
 gi|198268593|gb|EDY92863.1| Tol-Pal system beta propeller repeat protein TolB [Octadecabacter
           antarcticus 238]
          Length = 441

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 161/438 (36%), Positives = 241/438 (55%), Gaps = 10/438 (2%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV----SIDELGGKVSE 67
           N       +++      P S    +++         +  A   F       + +   +S 
Sbjct: 4   NFLTLFAAIMLAFVSITPASAQEPLRLTLRDGVIEALPFALPTFQSEVAGSEGMAADISR 63

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V+++DL  + +F  I   +F     +  S   F DW ++ AQ LVTG V   G +++ V+
Sbjct: 64  VITEDLNGTGLFRQIPASAFISTPASFGSAIAFPDWRAINAQALVTGAVAVNG-NQVTVK 122

Query: 128 FRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           FRL+DV    ++  G +F  +   WR++AH +SD +Y  ITGE G F+SR+++V+E+   
Sbjct: 123 FRLYDVFSGGEMGEGLQFAGTTDGWRRMAHKVSDAVYSRITGEAGYFDSRVVYVAETGPK 182

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L +MD DGAN++YLT S   I+  PRFSP+  ++ Y +Y+     R+ ++D   
Sbjct: 183 DDRAKRLAIMDYDGANVQYLTDS-SAIVLAPRFSPSGDRILYTSYESG-FPRINILDVAT 240

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               +       M  +PRFS +G++ + S+      DIY  DL +    RLTNT  I  S
Sbjct: 241 VVRQQMTTAAGEMAFSPRFSRDGRQVIYSLANGGNTDIYRTDLATGQNTRLTNTPAIETS 300

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD SQIVFESDR G +QLYVM +NG + +RIS +    Y  PVWSP+GDLIAFTK 
Sbjct: 301 PSFSPDGSQIVFESDRSGTQQLYVMSANGGEPQRISFE-NGRYGTPVWSPRGDLIAFTKQ 359

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNG 425
              +F IGVM+ DG++ERLL      + PTW+P+GR ++F+R+  G D  + LYS+D+ G
Sbjct: 360 ESGRFHIGVMRTDGTEERLLTSSFLDEGPTWAPNGRVIMFARETQGSDGTTGLYSVDITG 419

Query: 426 RNETLINTPAYASDPQWV 443
           RN   + TP   SDP W 
Sbjct: 420 RNLRRVTTPQGGSDPSWG 437



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 10/138 (7%)

Query: 314 SQIVFESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S++V+ ++   K+    +L +M  +G++ + ++ D  A    P +SP GD I +T +   
Sbjct: 171 SRVVYVAETGPKDDRAKRLAIMDYDGANVQYLT-DSSAIVLAPRFSPSGDRILYTSYESG 229

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGR 426
              I ++       + +   +     +P +S  GR +I+S    G+T   +Y  DL  G+
Sbjct: 230 FPRINILDVATVVRQQMTTAAGEMAFSPRFSRDGRQVIYSLANGGNT--DIYRTDLATGQ 287

Query: 427 NETLINTPAYASDPQWVG 444
           N  L NTPA  + P +  
Sbjct: 288 NTRLTNTPAIETSPSFSP 305


>gi|89053466|ref|YP_508917.1| translocation protein TolB [Jannaschia sp. CCS1]
 gi|119371046|sp|Q28TS0|TOLB_JANSC RecName: Full=Protein tolB; Flags: Precursor
 gi|88863015|gb|ABD53892.1| Twin-arginine translocation pathway signal [Jannaschia sp. CCS1]
          Length = 445

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 159/443 (35%), Positives = 240/443 (54%), Gaps = 9/443 (2%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF---VSIDELGGK 64
              +     L     L G  F  S    +++        P+  A   F      ++    
Sbjct: 5   RNFIRTTSALAASTALPGYAFGQS--GPLRLEITEGVIEPLPFALPTFLAVGGAEDAAAD 62

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           VS V++ DL+ + +F  I  D++  +ITN  +   + DW ++ AQ L+TG+V      +L
Sbjct: 63  VSRVIAADLRGTGLFRQIPPDAYISQITNFGAPVAYPDWQAINAQALITGQVEARADGQL 122

Query: 125 RVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            V FRL+DV  +  +  G +F     SWR++AHT++D +Y  ITGE G F++R+ F++E 
Sbjct: 123 VVRFRLFDVFSQAPLGEGLQFVGPADSWRRMAHTVADQVYSRITGEGGYFDTRVAFIAEE 182

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                    L +MD DGAN+++LT SR  I+  PRFSP   ++ Y +Y+        +  
Sbjct: 183 GPKNARLKRLAIMDYDGANVQFLTDSRS-IVLAPRFSPQGDRILYTSYESGFPQVYIMDV 241

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
             + R P       +M  +PRFS +G+  + S+      DIYS+DL +    +LT    I
Sbjct: 242 ATVQRRPLEAIPAETMTFSPRFSPSGQSVVFSLVDGSNTDIYSLDLATGTRRQLTQAPSI 301

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + S+SPD SQIVFESDR G +Q+Y+M ++G + +R+S      Y  PVWSP+GD IAF
Sbjct: 302 ETAPSFSPDGSQIVFESDRSGNQQIYIMPADGGEARRVSAGT-GRYGTPVWSPRGDYIAF 360

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSID 422
           TK    +F IGVM+ DGS ERLL      + PTW+P+GR ++F+R+  GD G   +YS+D
Sbjct: 361 TKQENGRFHIGVMRTDGSDERLLTSSFLDEGPTWAPNGRVIMFTRETPGDDGAPAVYSVD 420

Query: 423 LNGRNETLINTPAYASDPQWVGF 445
           ++GRN   + TP  ASDP W   
Sbjct: 421 ISGRNLQRVATPGMASDPAWSPL 443


>gi|163745825|ref|ZP_02153184.1| translocation protein TolB precursor [Oceanibulbus indolifex
           HEL-45]
 gi|161380570|gb|EDQ04980.1| translocation protein TolB precursor [Oceanibulbus indolifex
           HEL-45]
          Length = 448

 Score =  417 bits (1071), Expect = e-114,   Method: Composition-based stats.
 Identities = 162/436 (37%), Positives = 248/436 (56%), Gaps = 16/436 (3%)

Query: 22  VLIGGFFPTSIHAF-VKVATNSANYSPVSIAFTKFVSI----DELGGKVSEVVSKDLQRS 76
                  P   HA  +++  +     P+  A   F        ++   ++ VVS+DL  +
Sbjct: 15  AATLTLAPNQSHAQPLRIVIDDPTIEPLPFAVPSFQPESGEAGQMAVDLARVVSEDLTGT 74

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
            +F  I   ++   +++ ++   + DW ++ AQ L+TG V   G + + V+FR++DV   
Sbjct: 75  GLFREIPASAYISTVSDFNAPVEYADWKAINAQALITGAVNVSG-NSVNVKFRVYDVFSG 133

Query: 137 KQII------GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           ++++      G +F  +   WR++AH ++D +Y  ITGE G F+SR+++VSE+      +
Sbjct: 134 EELLDGRGQGGLQFTGTVDGWRRMAHKVADAVYSRITGEGGYFDSRVVYVSETGPKDARQ 193

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L VMD DGAN++YLT S   I+  PRFSP   +V Y +Y+     R+Y++D    +  
Sbjct: 194 KRLAVMDYDGANLKYLTESGS-IVLAPRFSPTGDRVLYTSYESG-FPRIYVLDIGTVQRR 251

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                  SM  APRFS +G+  + S+ +    DI+S+D+ S  + RLTNT  I  + S+S
Sbjct: 252 ALQSAEGSMAFAPRFSPSGQTVVYSLSQGGNTDIFSMDINSGQSVRLTNTPAIETAPSFS 311

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD S+IVFESDR G  QLYVM + G +  RIS   E  Y  PVWSP+GDL+AFTK +  +
Sbjct: 312 PDGSRIVFESDRSGSPQLYVMPATGGEATRISF-GEGRYGTPVWSPRGDLVAFTKQNKGR 370

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNET 429
           F IGVM+ DGS+ERLL      + PTW+P+GR ++F+R+  G  G S LYS+D++GRN  
Sbjct: 371 FHIGVMRLDGSEERLLTASFLDEGPTWAPNGRVIMFARETQGAGGSSSLYSVDISGRNLK 430

Query: 430 LINTPAYASDPQWVGF 445
            + TP   SDP W   
Sbjct: 431 PVRTPEGGSDPSWSPL 446


>gi|114798605|ref|YP_758888.1| tolB protein [Hyphomonas neptunium ATCC 15444]
 gi|114738779|gb|ABI76904.1| tolB protein [Hyphomonas neptunium ATCC 15444]
          Length = 451

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 162/455 (35%), Positives = 252/455 (55%), Gaps = 22/455 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID---ELGGKVSE 67
           +  ++   L ++++         A ++V  +  N+ P  IA   F       E+  +++E
Sbjct: 1   MLKRLMPFLAVIMLAVGLVAPASAQLQVRVDEGNFKPTPIAIPDFQVTGANTEIARQITE 60

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           VV  DL  + +F++ +  SF Q+  + ++ PRF DW  +    LV G   +    +L V 
Sbjct: 61  VVRADLASTGLFDMQNPASFIQRDLSINAEPRFADWKIIRTDALVVGAFEELPDGKLAVS 120

Query: 128 FRLWDVKDRKQI-----IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           FRLWDV   + +      G++  ++P +WR+IAH I+D IY  +TGE   F++RI++++E
Sbjct: 121 FRLWDVYGGELMRINGEPGRRLTTTPENWRRIAHKIADSIYTRLTGEDPYFDTRIVYIAE 180

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +         L +MD DGAN +YLT  R  +   PRFSP+ Q++ Y +++     RVYL 
Sbjct: 181 TGPKTERVKRLAIMDSDGANQQYLTSGRSTV-LTPRFSPSSQEITYMSFEGGRP-RVYLF 238

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +    R  + +GNF  M  APRF ++G+  L+S  +    D+Y ++L++  + RLT+   
Sbjct: 239 NIETGRQ-ELLGNFPGMTFAPRFGTDGQSVLLSQAQRGNTDVYIMNLRTRESRRLTDHPA 297

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK----------RISQDKEASYFDP 352
           I+ S S SPD   +VF SDR G  QLY+M ++GS +           RI+      Y  P
Sbjct: 298 IDTSPSMSPDGKSVVFNSDRGGTPQLYIMNTDGSPRACASGGRDTACRITF-GRGRYSTP 356

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           VWSP+GDLIAFTK  G KF IGV+  DG  ERLL E    + P WSP+GR ++F R+   
Sbjct: 357 VWSPRGDLIAFTKQEGGKFYIGVIGTDGKGERLLSESYLDEGPDWSPNGRVIVFFRENRP 416

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
             G++L+S+DL+GRNE  + T   ASDP W   ++
Sbjct: 417 GAGAQLWSVDLSGRNERRVMTQTDASDPAWSPVLE 451


>gi|294085866|ref|YP_003552626.1| TolB protein [Candidatus Puniceispirillum marinum IMCC1322]
 gi|292665441|gb|ADE40542.1| TolB protein [Candidatus Puniceispirillum marinum IMCC1322]
          Length = 431

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 170/434 (39%), Positives = 253/434 (58%), Gaps = 13/434 (2%)

Query: 22  VLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSEVVSKDLQRSD 77
           +++        HA ++V       +P  IA   F   D    E+G ++S ++S DL+ S 
Sbjct: 1   MIMTVMVAGVAHAQLRVVITEGQVAPTPIAIADFTGPDGEVTEIGRQMSAIISNDLESSG 60

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  I   +F      P   P F DW  +GA+ L+ G    +    L+VEF LWDV  +K
Sbjct: 61  LFQPIDSAAFISPPKAPSIRPNFSDWTPVGAKGLLVGSAYTDENGMLQVEFVLWDVVTQK 120

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
            I      S PA  R+++H I+D +Y+  TG+ G F+++I++V+ES         L +MD
Sbjct: 121 DITQGSGNSDPAGLRQLSHKIADYVYEEFTGDTGYFDTQIVYVAESGSQSQRVKRLAIMD 180

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DG N RYLT   D ++  PRFSP   +VAY  Y +E+   VYL+D    R  +R+G+F 
Sbjct: 181 QDGHNHRYLTNGLD-LVLTPRFSPTANEVAYLNYFNEEP-NVYLLDVFTAR-TERLGSFP 237

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            M  APRF  +G + ++S+ KD   DIY +D+++ +  +LT +  I+ S SYSPD  +IV
Sbjct: 238 GMTFAPRFGPDGDKLIMSLAKDGLTDIYEMDMRTQSITQLTKSASIDTSPSYSPDGKRIV 297

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SDR G +QLYVM ++GS+ KRIS   +  Y  PVWSP+GD++AFTK +G  F IGVM 
Sbjct: 298 FNSDRGGSQQLYVMNADGSNVKRISY-GDGRYATPVWSPRGDIVAFTKMTGGTFYIGVMN 356

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK----DGDTG-SKLYSIDLNGRNETLIN 432
            DG+ ERLL +   ++ PTW+P+GR L++ +++    DG  G + LY +D+ G NE  I 
Sbjct: 357 IDGTGERLLAQGFLVEGPTWAPNGRVLMYFKQQPFKDDGSGGKTALYRVDITGFNERRII 416

Query: 433 TPAYASDPQWVGFM 446
           TP+ ASDP W   +
Sbjct: 417 TPSDASDPAWSPLL 430


>gi|99082205|ref|YP_614359.1| translocation protein TolB [Ruegeria sp. TM1040]
 gi|118574598|sp|Q1GE19|TOLB_SILST RecName: Full=Protein tolB; Flags: Precursor
 gi|99038485|gb|ABF65097.1| TolB-like protein [Ruegeria sp. TM1040]
          Length = 441

 Score =  415 bits (1068), Expect = e-114,   Method: Composition-based stats.
 Identities = 165/445 (37%), Positives = 255/445 (57%), Gaps = 14/445 (3%)

Query: 13  MKINLCLLLVLIGGFFPT-SIHAF---VKVATNSANYSPVSIAFTKFVSIDELGG----K 64
           M+  +  +L+ +    P  ++ A    +++        P+  A   F++           
Sbjct: 1   MRNAIATVLLGLAMLLPVGAVQAQDGPLRIEITDGVIEPLPFAVPDFIADTPAAAQYATD 60

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           ++ V+++DL  S +F  I + ++    T+ D+   F DW ++ AQ L+ G V   G DR+
Sbjct: 61  IARVIAQDLVGSGLFREIPKVAYISPYTDFDAEVNFTDWKAINAQALIAGAVSLSG-DRI 119

Query: 125 RVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            V FR +DV   +++  G +   +   WR+IAH ++D IY  +TGE G F+SR++FVSE+
Sbjct: 120 TVRFRGYDVFAGQELGAGLQLSGTTDGWRRIAHKVADTIYSRLTGEGGYFDSRVVFVSET 179

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                 K  L +MD DGAN++YLT S D I+  PRFSP   +V Y +Y+     +++++D
Sbjct: 180 GPKNDRKKRLAIMDYDGANVQYLTNS-DAIVLAPRFSPTGDRVLYTSYESG-FPQIHVLD 237

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +         SM  APRF+ NG+  + S  +    D++S+D+ S   +RLT+   I
Sbjct: 238 VGRVQRRVLSAGNGSMSFAPRFAPNGQTIVYSQSQGGNTDLFSMDINSGNPQRLTSAPSI 297

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + S+SPD SQIVFESDR G  QLYVM ++G + KRIS   +  Y  PVWSP+GD IAF
Sbjct: 298 ETAPSFSPDGSQIVFESDRSGTSQLYVMSASGGEAKRISF-GQGRYGTPVWSPRGDYIAF 356

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSID 422
           TK +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++F+R+  G +G ++LYS+D
Sbjct: 357 TKQNAGRFHIGVMRTDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGASGQARLYSVD 416

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           ++GRN   + TP  ASDP W    +
Sbjct: 417 ISGRNLKPVKTPDGASDPSWSPLQN 441


>gi|77163683|ref|YP_342208.1| hypothetical protein Noc_0145 [Nitrosococcus oceani ATCC 19707]
 gi|119371047|sp|Q3JER8|TOLB_NITOC RecName: Full=Protein tolB; Flags: Precursor
 gi|76881997|gb|ABA56678.1| TolB [Nitrosococcus oceani ATCC 19707]
          Length = 434

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 119/440 (27%), Positives = 222/440 (50%), Gaps = 13/440 (2%)

Query: 11  LNMKIN---LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE-LGGKVS 66
           +N ++    + +L +L+      S+ A + +       + + IA   F +        V+
Sbjct: 2   MNTRVWCKIIGMLALLVWLVSSPSVFAVLTIEITGGTEAALPIAIVPFQNEGSTPPENVA 61

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            V++ DL RS  F  + ++    +  N   I +FQDW  LG++ LV G+VI  G DR  V
Sbjct: 62  AVIAADLARSGRFAPLPEEDLISRPRNASDI-QFQDWRRLGSEGLVIGKVISLGADRYEV 120

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F+L+D+   +Q++G+++    A  R +AH I+D IY+++TGEKG F + I FV+ S  +
Sbjct: 121 RFQLFDIYKEEQLVGRRYQVPAAGLRHLAHQIADLIYETLTGEKGIFTTHIAFVTVSRAA 180

Query: 187 -GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G  + SL V D DG N   +  S++ I   P +SP+  ++AY +++      V++ + R
Sbjct: 181 HGAKQYSLQVADVDGHNPHTILRSKEPI-LSPAWSPDGTQLAYVSFERRRS-EVFVQELR 238

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  + + +F  +  AP +S +G +  + + K+   +IY  DL +    RLT+   I+ 
Sbjct: 239 TGQ-RQSVASFSGINSAPDWSPDGGKLALVLSKEGNPEIYIRDLATGRLTRLTHNTAIDT 297

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             +++PD   IVF SDR G+ QLY +  +G   +R++ D   +     ++P G  +A   
Sbjct: 298 EPAWAPDGGSIVFTSDRGGRPQLYQIPVSGGRAQRLTFDGAYNASA-SFAPDGRRLALIH 356

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               +F I V+     + ++L E    ++P+++P+GR ++++       G  L ++  +G
Sbjct: 357 GDKGQFHIAVLNLQSKELQVLTETRMDESPSFAPNGRMILYATSS--PQGGVLAAVSTDG 414

Query: 426 RNETLINTPAY-ASDPQWVG 444
           R    +        +P W  
Sbjct: 415 RVRQRLAQQGDEVREPAWSP 434


>gi|304320242|ref|YP_003853885.1| translocation protein TolB precursor [Parvularcula bermudensis
           HTCC2503]
 gi|303299144|gb|ADM08743.1| translocation protein TolB precursor [Parvularcula bermudensis
           HTCC2503]
          Length = 442

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 165/441 (37%), Positives = 242/441 (54%), Gaps = 8/441 (1%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVK--VATNSANYSPVSIAFTKF----VSIDELGGKVS 66
           +   L  L V      P    A  +  +        P+ +A   F       + +   +S
Sbjct: 4   IVRVLSALFVAFTLALPLGAVAQDEPLIDIVGGRTDPMPVALPAFIATGEGAERVSADLS 63

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           EV+  DL  S +F  I   +F Q++ + ++ PRF DW ++ A+VL+ G V      R++V
Sbjct: 64  EVIRDDLASSSLFAPIDPAAFIQQLQSVNTPPRFADWRAIDARVLLVGEVTALSGGRIQV 123

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             RLWDV   KQ+    F +   + RK  H I+D +Y+ +TGE G F+++I++V+ES   
Sbjct: 124 AARLWDVGASKQLGTIAFKTPATNVRKAGHEIADFVYEQLTGEPGYFDTKIVYVAESGPK 183

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L +MD+DGAN   LT   +     PRFSP QQ++ +    D+   +VYL D   
Sbjct: 184 TDRRKRLMIMDQDGANPSILTDGLNFDALTPRFSPTQQQIIFLAMFDDRPSQVYLYDIET 243

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + +G++R M  APRFS++G+  L+S+++    DI  +DL +   ERLT    I+ S
Sbjct: 244 TEM-EALGSWRGMTFAPRFSTDGRGVLLSIEEAGNTDIARMDLITRRIERLTRNPAIDTS 302

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S SPD   I F SDR G +Q+YVM ++GSDQ+RI+     +Y  PVWSP+GDLIAFT+ 
Sbjct: 303 PSMSPDGRHITFASDRGGSQQIYVMNADGSDQRRITF-GNGTYGTPVWSPRGDLIAFTRL 361

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              +F IGV+K DG+ ERLL E    + PTWSP+GR ++F R+        LYSIDL GR
Sbjct: 362 YRGRFYIGVVKPDGTGERLLTESYLDEGPTWSPNGRVIMFFRENRPGGPVNLYSIDLTGR 421

Query: 427 NETLINTPAYASDPQWVGFMD 447
           N   + T   ASDP W   +D
Sbjct: 422 NLRRVETSTEASDPAWSPLLD 442


>gi|254435418|ref|ZP_05048925.1| Tol-Pal system beta propeller repeat protein TolB [Nitrosococcus
           oceani AFC27]
 gi|207088529|gb|EDZ65801.1| Tol-Pal system beta propeller repeat protein TolB [Nitrosococcus
           oceani AFC27]
          Length = 422

 Score =  411 bits (1057), Expect = e-113,   Method: Composition-based stats.
 Identities = 118/429 (27%), Positives = 217/429 (50%), Gaps = 10/429 (2%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE-LGGKVSEVVSKDLQRSD 77
           +L +L+      S+ A + +       + + IA   F +        V+ V++ DL RS 
Sbjct: 1   MLALLVWLVSSPSVFAVLTIEITGGTEAALPIAIVPFQNEGSTPPENVAAVIAADLARSG 60

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F  + ++    +  N   I +FQDW  LG++ LV G+VI  G DR  V F+L+D+   +
Sbjct: 61  RFAPLPEEDLISRPRNASDI-QFQDWRRLGSEGLVIGKVISLGADRYEVRFQLFDIYKEE 119

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GIIKNSLCVM 196
           Q++G+++    A  R +AH I+D IY+++TGEKG F + I FV+ S  + G  + SL V 
Sbjct: 120 QLVGRRYQVPAAGLRHLAHQIADLIYETLTGEKGIFTTHIAFVTVSRAAHGAKQYSLQVA 179

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D DG N   +  S++ I   P +SP+  ++AY +++      V++ + R  +  + + +F
Sbjct: 180 DVDGHNPHTILRSKEPI-LSPAWSPDGTQLAYVSFERRRS-EVFVQELRTGQ-RQSVASF 236

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             +  AP +S +G +  + + K+   +IY  DL +    RLT+   I+   +++PD   I
Sbjct: 237 SGINSAPDWSPDGGKLALVLSKEGNPEIYIRDLATGRLTRLTHNTAIDTEPAWAPDGGSI 296

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR G+ QLY +  +G   +R++ D   +     ++P G  +A       +F I V+
Sbjct: 297 VFTSDRGGRPQLYQIPVSGGRAQRLTFDGAYNASA-SFAPDGRRLALIHGDKGQFHIAVL 355

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                + ++L E    ++P+++P+GR ++++       G  L ++  +GR    +     
Sbjct: 356 NLQSKELQVLTETRMDESPSFAPNGRMILYATSS--PQGGVLAAVSTDGRVRQRLAQQGD 413

Query: 437 -ASDPQWVG 444
              +P W  
Sbjct: 414 EVREPAWSP 422


>gi|146276614|ref|YP_001166773.1| translocation protein TolB [Rhodobacter sphaeroides ATCC 17025]
 gi|166229985|sp|A4WQ04|TOLB_RHOS5 RecName: Full=Protein tolB; Flags: Precursor
 gi|145554855|gb|ABP69468.1| TolB, N-terminal domain protein [Rhodobacter sphaeroides ATCC
           17025]
          Length = 444

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 162/420 (38%), Positives = 237/420 (56%), Gaps = 10/420 (2%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
              +++        P+  A   FV       +L   ++ V++ DL  + +F  I   +  
Sbjct: 28  QGPLRIQITEGVIEPLPFAVPNFVAETSGASQLAQDMARVIAADLSGTGLFREIPASAHI 87

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII-GKKFFSS 147
            ++T+ D+   + DW ++ AQ L+TG V   G DR+ V+FRL DV   + +  G +F  S
Sbjct: 88  SRVTSFDAPIAYNDWKAINAQALITGSVSASG-DRVVVKFRLHDVFSDQPLGEGLQFAGS 146

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
            + WR++AH ++D  Y  ITGE G F+SR++FVSE+         L VMD DGAN++YLT
Sbjct: 147 ASGWRRMAHKVADVAYSRITGEGGYFDSRVVFVSETGPKNARAKRLAVMDYDGANVQYLT 206

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            S   I+  PRFSP   ++ + +Y      R+YLMD              +M  APRF+ 
Sbjct: 207 DSSS-IVLAPRFSPTGDRILFTSYSTG-FPRIYLMDVGSLATRSLAEQPGTMTFAPRFAP 264

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+    S+++    DIY++D  S    +LTN+  I  + SYSPD SQIVFESDR G +Q
Sbjct: 265 DGRTVAFSLEQGGNTDIYTLDTASGTRRQLTNSPSIETAPSYSPDGSQIVFESDRSGGQQ 324

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           LY+M + G + +RIS +    Y  PVWSP+GDLIAFTK    +F IGVM+ DGS+ERLL 
Sbjct: 325 LYIMPAGGGEPRRIS-NGAGRYGTPVWSPRGDLIAFTKQHQGRFHIGVMRTDGSEERLLT 383

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                + PTW+P+GR L+F+R+  G  G   LYS+D++GRN   +     ASDP W   +
Sbjct: 384 ASFLDEGPTWAPNGRVLMFTREGAGAGGQPALYSVDISGRNLKKVPLSVPASDPAWSPLL 443


>gi|89068040|ref|ZP_01155457.1| translocation protein TolB precursor [Oceanicola granulosus
           HTCC2516]
 gi|89046279|gb|EAR52336.1| translocation protein TolB precursor [Oceanicola granulosus
           HTCC2516]
          Length = 446

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 161/448 (35%), Positives = 248/448 (55%), Gaps = 17/448 (3%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHA-------FVKVATNSANYSPVSIAFTKF----VSID 59
           +  ++   LL  L+  F    +          +++     N  P+  A   F       +
Sbjct: 1   MTHRLFANLLAGLLVAFAAMWLAGAAAAQGGPLRITVTDPNVEPLPFAIPAFEAETAGAE 60

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
            L   +S +V++DL  + +F  I   +F  ++T+      + DW ++ AQ L+TG V   
Sbjct: 61  GLASDISRLVAQDLVNTGLFREIPSTAFVSQLTSFAQPVAYTDWRTINAQALITGAVAVN 120

Query: 120 GKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
           G  ++ V+FRL+DV   +++  G++   +   WR++AH ++D +Y  ITGE G F+SR++
Sbjct: 121 G-GQVTVKFRLYDVFSGQELGAGQQLVGTTDGWRRMAHKVADQVYSRITGESGYFDSRVV 179

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           FVSE+      +  L +MD DGAN++YLT S   I+  PRFSP   +V Y ++D     R
Sbjct: 180 FVSETGPKNDRRKRLAIMDYDGANVQYLTDSGS-IVLAPRFSPTGDRVIYTSWDSG-FPR 237

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +  +D       +       M  +PRFS +G++ + S+ +   +DI+  D+ +   +RLT
Sbjct: 238 INAIDVGTVSRQQIPVQAGEMAFSPRFSRDGRQVIYSLSEGGNIDIWRTDITTGQHQRLT 297

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +   I  + S SPD  +IVFESDR G +QLYVM   G + +RIS   E  Y  PVWSP+G
Sbjct: 298 SAPSIETAPSLSPDGQRIVFESDRSGSQQLYVMPVTGGEPQRISF-GEGRYGSPVWSPRG 356

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSK 417
           D+IAFTK    +F IGVM+ DGS+ERLL      + PTWSP+GR L+FSR+  G D    
Sbjct: 357 DMIAFTKQHAGRFHIGVMRTDGSEERLLTASFLDEGPTWSPNGRVLMFSRETQGADGAPA 416

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVGF 445
           +YS+D++GRN   + TPA+ASDP W   
Sbjct: 417 IYSVDVSGRNLRRVTTPAFASDPSWGPL 444


>gi|77464240|ref|YP_353744.1| translocation protein TolB [Rhodobacter sphaeroides 2.4.1]
 gi|126463082|ref|YP_001044196.1| translocation protein TolB [Rhodobacter sphaeroides ATCC 17029]
 gi|332559129|ref|ZP_08413451.1| translocation protein TolB [Rhodobacter sphaeroides WS8N]
 gi|119371057|sp|Q3J041|TOLB_RHOS4 RecName: Full=Protein tolB; Flags: Precursor
 gi|166229984|sp|A3PM58|TOLB_RHOS1 RecName: Full=Protein tolB; Flags: Precursor
 gi|77388658|gb|ABA79843.1| Probable TolB protein precursor [Rhodobacter sphaeroides 2.4.1]
 gi|126104746|gb|ABN77424.1| TolB, N-terminal domain protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|332276841|gb|EGJ22156.1| translocation protein TolB [Rhodobacter sphaeroides WS8N]
          Length = 444

 Score =  410 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 162/420 (38%), Positives = 237/420 (56%), Gaps = 10/420 (2%)

Query: 33  HAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
              +++        P+  A   F        EL   ++ V++ DL  + +F  I   +  
Sbjct: 28  QGPLRIQITEGVIEPLPFAVPDFVAENAGASELARDMARVIASDLSGTGLFREIPASAHI 87

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII-GKKFFSS 147
            ++T+ ++   + DW ++ AQ L+TG V   G DR+ V+FRL+DV   + +  G +F  S
Sbjct: 88  SRVTSFEAPVAYGDWKAINAQALITGSVSASG-DRVVVKFRLYDVFSDQPLGEGLQFAGS 146

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
            + WR++AH ++D  Y  ITGE G F+SR++FVSES         L VMD DGAN++YLT
Sbjct: 147 ASGWRRMAHKVADVAYSRITGEGGYFDSRVVFVSESGPKNARAKRLAVMDYDGANVQYLT 206

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            S   I+  PRFSP   ++ + +Y      R+YLMD              +M  APRF+ 
Sbjct: 207 DSSS-IVLAPRFSPTGDRILFTSYSTG-FPRIYLMDVGSLATRGLAEQPGTMTFAPRFAP 264

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+    S+++    DIY++D  S    +LTN+  I  + SYSPD SQIVFESDR G +Q
Sbjct: 265 DGRTVAFSLEQGGNTDIYTLDTGSGTRRQLTNSPSIETAPSYSPDGSQIVFESDRSGGQQ 324

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           LY+M + G + +RIS +    Y  PVWSP+GDLIAFTK    +F IGVM+ DGS+ERLL 
Sbjct: 325 LYIMPAGGGEPRRIS-NGAGRYGTPVWSPRGDLIAFTKQHQGRFHIGVMRTDGSEERLLT 383

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                + PTW+P+GR L+F+R+  G  G   LYS+D++GRN   +     ASDP W   +
Sbjct: 384 ASFLDEGPTWAPNGRVLMFTREGAGAGGQPALYSVDISGRNLKKVPLSVPASDPAWSPLL 443


>gi|221640124|ref|YP_002526386.1| translocation protein TolB [Rhodobacter sphaeroides KD131]
 gi|221160905|gb|ACM01885.1| Protein tolB precursor [Rhodobacter sphaeroides KD131]
          Length = 435

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 162/420 (38%), Positives = 237/420 (56%), Gaps = 10/420 (2%)

Query: 33  HAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
              +++        P+  A   F        EL   ++ V++ DL  + +F  I   +  
Sbjct: 19  QGPLRIQITEGVIEPLPFAVPDFVAENAGASELARDMARVIASDLSGTGLFREIPASAHI 78

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII-GKKFFSS 147
            ++T+ ++   + DW ++ AQ L+TG V   G DR+ V+FRL+DV   + +  G +F  S
Sbjct: 79  SRVTSFEAPVAYGDWKAINAQALITGSVSASG-DRVVVKFRLYDVFSDQPLGEGLQFAGS 137

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
            + WR++AH ++D  Y  ITGE G F+SR++FVSES         L VMD DGAN++YLT
Sbjct: 138 ASGWRRMAHKVADVAYSRITGEGGYFDSRVVFVSESGPKNARAKRLAVMDYDGANVQYLT 197

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            S   I+  PRFSP   ++ + +Y      R+YLMD              +M  APRF+ 
Sbjct: 198 DSSS-IVLAPRFSPTGDRILFTSYSTG-FPRIYLMDVGSLATRGLAEQPGTMTFAPRFAP 255

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+    S+++    DIY++D  S    +LTN+  I  + SYSPD SQIVFESDR G +Q
Sbjct: 256 DGRTVAFSLEQGGNTDIYTLDTGSGTRRQLTNSPSIETAPSYSPDGSQIVFESDRSGGQQ 315

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           LY+M + G + +RIS +    Y  PVWSP+GDLIAFTK    +F IGVM+ DGS+ERLL 
Sbjct: 316 LYIMPAGGGEPRRIS-NGAGRYGTPVWSPRGDLIAFTKQHQGRFHIGVMRTDGSEERLLT 374

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                + PTW+P+GR L+F+R+  G  G   LYS+D++GRN   +     ASDP W   +
Sbjct: 375 ASFLDEGPTWAPNGRVLMFTREGAGAGGQPALYSVDISGRNLKKVPLSVPASDPAWSPLL 434


>gi|323138231|ref|ZP_08073303.1| Tol-Pal system beta propeller repeat protein TolB [Methylocystis
           sp. ATCC 49242]
 gi|322396483|gb|EFX99012.1| Tol-Pal system beta propeller repeat protein TolB [Methylocystis
           sp. ATCC 49242]
          Length = 435

 Score =  410 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 162/418 (38%), Positives = 253/418 (60%), Gaps = 5/418 (1%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           T   A   +      + P+++A   F+  DE    ++ V   + +RS     I   +  +
Sbjct: 23  TPASAGRIIELKGGGFQPINVAVAPFIG-DEAARTITSVTMNNFKRSVFLKPIDGATVGE 81

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
              +PD  P    + ++ AQ ++TGR  + G  RL+ EFRL+DV   +Q+ G+++ +  A
Sbjct: 82  D-GSPDQTPNLDAYKAINAQFVLTGRSQRTGDGRLKTEFRLFDVTTGEQVAGQQYVTESA 140

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           + R++AH +SD ++  +TGEKG F++R++FV ES      +  L +MD+DGAN+RYLT  
Sbjct: 141 NMRRVAHLLSDAVFTRVTGEKGFFDTRVVFVDESGSKDKRRKRLAMMDQDGANVRYLTRG 200

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            D ++  PRFSP+   V Y  ++ +   +V LM+    +  + +GNF  M  +PRFS +G
Sbjct: 201 -DDLVVTPRFSPSSLDVTYMAFNSDGEPKVLLMNIESSQ-REVVGNFPGMTFSPRFSPDG 258

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           ++ ++S+ +  + ++Y++DL+S  T RLT+T  I+ + S+SPD S+I FESDR G +Q+Y
Sbjct: 259 QKIIMSLSQGSSTNLYTMDLRSRTTTRLTDTSAIDTAPSFSPDGSRIAFESDRGGSQQIY 318

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           VM ++G + KRIS      Y  PVWSP+GD IAFTK +G  F+IGVMK DGS ER+L E 
Sbjct: 319 VMGAHGGEAKRISFGG-GRYSTPVWSPKGDYIAFTKQNGGNFSIGVMKTDGSGERILTEG 377

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
            + + PTW+P+G  L+F R+  G  G K+Y +D+ GR E  + TP YASDP W    D
Sbjct: 378 FHNEGPTWAPNGLFLMFFRESGGAGGPKIYMVDVFGRTELQVPTPGYASDPAWGPLQD 435


>gi|182677268|ref|YP_001831414.1| beta-propeller repeat-containing to-pal system protein TolB
           [Beijerinckia indica subsp. indica ATCC 9039]
 gi|182633151|gb|ACB93925.1| Tol-Pal system beta propeller repeat protein TolB [Beijerinckia
           indica subsp. indica ATCC 9039]
          Length = 448

 Score =  410 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 165/435 (37%), Positives = 257/435 (59%), Gaps = 5/435 (1%)

Query: 14  KINLCLLLV-LIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           K+ + L    +I                    + PVSIA T F          + ++  +
Sbjct: 18  KLLIGLSAAPVIAPIPRAFAQDRYLDVRPGGEFKPVSIAVTTFAGDGSGPSHPTSIIINN 77

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
            +RS   N +   SF   ++NPD  P+   W ++ AQ +VTGR  +    RL+ EFRLWD
Sbjct: 78  FRRSVFLNPLDPKSFVSDVSNPDQAPQMDAWKTINAQFVVTGRSARSADGRLQTEFRLWD 137

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V   +QI G+++ + P + R++AH ISD I+  ITGEKG F++R++FV E+      +  
Sbjct: 138 VTSGQQIAGQQYVTDPNNARRVAHIISDTIFSRITGEKGFFDTRVVFVDETGARDHRRKR 197

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L +MD+DGAN+RYLT   D ++  PRFSP+ Q + Y ++   D  +V L++    +  + 
Sbjct: 198 LAIMDQDGANVRYLTRG-DDLVVTPRFSPSSQDITYMSFGAADP-KVLLLNIETGQ-REV 254

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +GNF  M  +PRFS +G++ ++S+ +  + +++++DL+S  T RL+++  I+ S SYSPD
Sbjct: 255 VGNFPGMTFSPRFSPDGQKIVMSLSQGASSNLFTMDLRSRNTTRLSDSSSIDTSPSYSPD 314

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +QIVFESDR G +Q+Y+M + G   +R+S   +  Y  PVWSP+GD IAFT+  G  F 
Sbjct: 315 GTQIVFESDRGGTQQIYMMSAAGGGTRRVSF-GDGRYSTPVWSPRGDYIAFTRQKGSSFG 373

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           IGVMK DGS ER+L E  + + PTW+P+G  ++F R   G  G +L+ +DL GR E  + 
Sbjct: 374 IGVMKPDGSGERILTEGFHNEGPTWAPNGLYIMFFRDASGQGGPRLFMVDLYGRGEFPVP 433

Query: 433 TPAYASDPQWVGFMD 447
           TP++ASDP W   ++
Sbjct: 434 TPSFASDPAWSPLLN 448


>gi|114765731|ref|ZP_01444829.1| translocation protein TolB precursor [Pelagibaca bermudensis
           HTCC2601]
 gi|114541948|gb|EAU44983.1| translocation protein TolB precursor [Roseovarius sp. HTCC2601]
          Length = 446

 Score =  410 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 170/426 (39%), Positives = 255/426 (59%), Gaps = 13/426 (3%)

Query: 29  PTSIHAF---VKVATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNL 81
           P +  A    +++        P++ A   FV       +   ++++V++ DL  + +F  
Sbjct: 24  PNAAQAQGGPLRIEITEGTIEPMAYAVPSFVAETPGAQQYAEQITQVIADDLTGTGLFRE 83

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII- 140
           I +D+   +IT+ +S  +F DW ++ A VL+TG V ++   R+ V+FR+WDV    ++  
Sbjct: 84  IPRDAHISRITSFESPVQFADWKAINALVLLTGAVSEQ-NGRVTVKFRIWDVFAGTELGD 142

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G +F ++   WR++AH ++D +Y  +TGE G F+SR++FVSES         L +MD DG
Sbjct: 143 GMQFAATSDGWRRLAHKVADQVYSRLTGESGYFDSRVVFVSESGPKDQRAKRLAIMDYDG 202

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           AN++YLT SR  I+  PRFSPN ++V Y +Y+  +  RV++++    ++         M 
Sbjct: 203 ANVQYLTDSRS-IVLAPRFSPNGERVLYTSYESGEP-RVHVLNVGAVQSQIMSAGGGVMS 260

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            APRFS +G + + SV      DIY  DL S +T +LT T  I  + S+SPD S+IVFES
Sbjct: 261 FAPRFSPDGSKVVYSVTSGSNTDIYMRDLASGSTTQLTFTPAIETAPSFSPDGSRIVFES 320

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           DR G +QLYVM ++G +  RIS   +  Y  PVWSP+GDLIAFTK +  +F IGVM+ DG
Sbjct: 321 DRSGSQQLYVMPASGGEPTRISF-GQGRYGTPVWSPRGDLIAFTKQNQGRFHIGVMRTDG 379

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASD 439
           S+ERLL      + PTW+P+GR L+FSR+  G +G S LYS+D+ GR  T + TP  ASD
Sbjct: 380 SEERLLTASHLDEGPTWAPNGRVLMFSRETQGASGTSSLYSVDVAGRKLTRVRTPDGASD 439

Query: 440 PQWVGF 445
           P W   
Sbjct: 440 PSWGPL 445


>gi|254441731|ref|ZP_05055224.1| Tol-Pal system beta propeller repeat protein TolB [Octadecabacter
           antarcticus 307]
 gi|198251809|gb|EDY76124.1| Tol-Pal system beta propeller repeat protein TolB [Octadecabacter
           antarcticus 307]
          Length = 441

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 157/423 (37%), Positives = 237/423 (56%), Gaps = 10/423 (2%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQRSDVFNLISQ 84
           P +    +++         +  A   F       D +   +S V++ DL  + +F  I  
Sbjct: 21  PATAQEPLRLTLRDGVIEALPFALPTFQAEVAGSDGMAADISRVIAADLNGTGLFRQIPS 80

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII-GKK 143
            +F     +  S   F DW ++ +Q LVTG V   G +++ V+FRL+DV    ++  G +
Sbjct: 81  SAFISTPASFGSPIAFADWRAINSQALVTGAVAVNG-NQVTVKFRLYDVFSGAEMGEGLQ 139

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           F  + + WR++AH ++D +Y  ITGE G F+SR+++V+E+      +  + VMD DGAN+
Sbjct: 140 FAGTASGWRRMAHKVADAVYSRITGESGYFDSRVVYVAETGPKDDREKRIAVMDYDGANV 199

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +YLT S   I+  PRFSP+  ++ Y +Y+     R+ ++D       +       M  +P
Sbjct: 200 QYLTDS-STIVLAPRFSPSGDRILYTSYESG-FPRINILDVATVMRQQMRTADGEMAFSP 257

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           RFS +G++ + S+      DIY  DL +    RLTNT  I  + S+SPD SQIVFESDR 
Sbjct: 258 RFSRDGRQVIYSLANGGNTDIYRTDLATGQNMRLTNTPAIETAPSFSPDGSQIVFESDRS 317

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G +QLY+M +NG + +RIS      Y  PVWSP+GDLIAFTK    +F IGVM+ DG++E
Sbjct: 318 GTQQLYMMSANGGEPQRISF-GNGRYGTPVWSPRGDLIAFTKQELGRFHIGVMRTDGTEE 376

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           RLL      + PTW+P+GR ++FSR+  G D  + LYS+D+ GRN   + TP   SDP W
Sbjct: 377 RLLTSSFLDEGPTWAPNGRVIMFSRETQGSDGTTGLYSVDITGRNLRRVTTPQGGSDPSW 436

Query: 443 VGF 445
              
Sbjct: 437 GPL 439


>gi|15892329|ref|NP_360043.1| translocation protein TolB [Rickettsia conorii str. Malish 7]
 gi|32699713|sp|Q92IL4|TOLB_RICCN RecName: Full=Protein tolB; Flags: Precursor
 gi|15619474|gb|AAL02944.1| tolB protein precursor [Rickettsia conorii str. Malish 7]
          Length = 444

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 164/445 (36%), Positives = 250/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF     + D LG  + +V+S DL+
Sbjct: 4   IIYFILSLLFSVTSYALETINIEHGRADPTPIAVNKFDADNSAADVLGHDMVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    + +V F LWD  
Sbjct: 64  LSGLFRPISAASFIEEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKFKVSFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ+ G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLAGEMLEVPKNLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIK-RIA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  ++  PRF+ +  K+ Y +Y  +  + VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKS-LVLTPRFARSADKIFYVSYATKRRVLVYEKDLKTGKES-VVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  
Sbjct: 241 DFPGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKQLHKLTDGFGINTSPSYSPDGK 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYAAPSWSPRGDYIAFTKITKGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSID 422
           F IG+MK     D + ER++     +++P WSP+GR ++F+            +K+++ID
Sbjct: 360 FNIGIMKACPQDDENSERIITSGYLVESPCWSPNGRVIMFAKGWPSSAKAPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TPA ASDP+W G ++
Sbjct: 420 LTGHNEREIMTPADASDPEWSGVLN 444


>gi|260428940|ref|ZP_05782917.1| Tol-Pal system beta propeller repeat protein TolB [Citreicella sp.
           SE45]
 gi|260419563|gb|EEX12816.1| Tol-Pal system beta propeller repeat protein TolB [Citreicella sp.
           SE45]
          Length = 440

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 168/417 (40%), Positives = 251/417 (60%), Gaps = 10/417 (2%)

Query: 35  FVKVATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
            +++        P++ A   FV       +   +++ VV+ DL  + +F  I +D+   +
Sbjct: 27  PLRIEITEGTIEPMAYAVPDFVAETPGAQQYAQQIARVVADDLTGTGLFREIPRDAHISR 86

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII-GKKFFSSPA 149
           IT+ +S  +F DW ++ A VL+TG V +EG  R+ V+FR+WDV    ++  G +F ++  
Sbjct: 87  ITSFESPVQFADWKAINALVLLTGAVSEEG-GRISVKFRVWDVFAGTELGDGMQFAATAD 145

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            WR++AH ++D +Y  +TGE G F+SR++FVSES         L +MD DGAN++YLT S
Sbjct: 146 GWRRLAHKVADQVYSRLTGETGYFDSRVVFVSESGPKEQRAKRLAIMDYDGANVQYLTDS 205

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R  I+  PRFSPN  +V Y +Y+  +  ++++++    ++         M  APRFS +G
Sbjct: 206 RS-IVLAPRFSPNGDRVLYTSYETGEP-QIHVLNVGAVQSRILRSAAGVMSFAPRFSPDG 263

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R + SV +    DIY +D+ S A+ +LT T  I  + S+SPD S+IVFESDR G +QLY
Sbjct: 264 SRVVYSVTQGSNTDIYMMDVASGASTQLTATPAIETAPSFSPDGSRIVFESDRSGTQQLY 323

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           VM + G +  RIS   +  Y  PVWSP+GD+IAFTK    +F IGVM+ DGS+ERLL   
Sbjct: 324 VMPAGGGEATRISF-GQGRYGTPVWSPRGDMIAFTKQHQGRFHIGVMRTDGSEERLLTAS 382

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQWVGF 445
              + PTW+P+GR L+FSR+  G  G S LY++D+ GR  T + TPA ASDP W   
Sbjct: 383 PLDEGPTWAPNGRVLMFSRETLGAQGTSSLYTVDVAGRKLTRVRTPAGASDPSWGPL 439


>gi|254429692|ref|ZP_05043399.1| Tol-Pal system beta propeller repeat protein TolB [Alcanivorax sp.
           DG881]
 gi|196195861|gb|EDX90820.1| Tol-Pal system beta propeller repeat protein TolB [Alcanivorax sp.
           DG881]
          Length = 434

 Score =  409 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 98/441 (22%), Positives = 201/441 (45%), Gaps = 8/441 (1%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           + +    K+   + + L+   +  +  A + +         V IA   F         VS
Sbjct: 1   MQQACKRKVWTQISIALMAALWMVNAQAELLIKVTEGRVDAVPIAVVPFDGAQNAPEDVS 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           ++V  DL RS  F  +  +    +  N   +  ++D+  LG + ++TG +  +      V
Sbjct: 61  QIVQADLHRSGQFKPLPPEDMLSRPRNEQEMI-YRDFKVLGTEYVITGSMKAQETGGYEV 119

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            + L+DV  +K+++ + +    +  R +AH ISD IY+ +TG  G F+++IL+V+ +   
Sbjct: 120 SYALFDVARQKKLMSETYRPPESQLRDVAHAISDRIYEQLTGIPGAFSTKILYVTHNRH- 178

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L   D DG  +  +  S++ I   P +SP+ +K+AY +++D+    +Y+     
Sbjct: 179 DANPYQLQYADADGHRVTTILRSKEPI-MSPTWSPDGRKIAYVSFEDQGRPAIYIHSLAT 237

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               +++ +F  +  AP +S +G++  +++ +D   +IY ++L +    RLTN   I+  
Sbjct: 238 TE-REKVSSFSGINGAPDWSPDGQKLALTLSRDGNPEIYMLNLSTKGLTRLTNNYGIDTE 296

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             + PD   +VF S R G  Q+Y +  N    +R+S     +    V +P G  + +   
Sbjct: 297 PRWLPDGEHLVFTSSRSGGPQIYKLNINDKSVRRVSFQGAYNARSDV-TPDGRYLVYVHR 355

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               F +GV         ++      ++P+ +P+G  +I+  +  G    +  ++ ++GR
Sbjct: 356 RNGNFNVGVQDLQRGTFNIVTRTDMDESPSVAPNGSMVIYGTQHGGTGVLE--AVSIDGR 413

Query: 427 -NETLINTPAYASDPQWVGFM 446
               L +      +P W  F+
Sbjct: 414 VKVELPSKEGEVREPAWSPFL 434


>gi|91205083|ref|YP_537438.1| translocation protein TolB [Rickettsia bellii RML369-C]
 gi|157827580|ref|YP_001496644.1| translocation protein TolB [Rickettsia bellii OSU 85-389]
 gi|119371058|sp|Q1RJW5|TOLB_RICBR RecName: Full=Protein tolB; Flags: Precursor
 gi|166229987|sp|A8GXK7|TOLB_RICB8 RecName: Full=Protein tolB; Flags: Precursor
 gi|91068627|gb|ABE04349.1| TolB protein precursor [Rickettsia bellii RML369-C]
 gi|157802884|gb|ABV79607.1| translocation protein TolB precursor [Rickettsia bellii OSU 85-389]
          Length = 444

 Score =  409 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 159/444 (35%), Positives = 243/444 (54%), Gaps = 19/444 (4%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQR 75
           ++  I   F  + +A   +        P  IA   F     S + +G ++ +V+S DL+ 
Sbjct: 4   IIYCILLLFSFNSYALETINIEHGKADPTPIAVNNFEADSASDNTVGHEIVKVISNDLKL 63

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
             +F+ IS  SF ++ T     P F  W  + A +LV G V K    +L++ F LWD   
Sbjct: 64  CGLFHPISSASFIEEKTGIGYKPLFAAWRQINASLLVNGAVKKLENGKLKISFILWDTLL 123

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            KQ+ G+        WR+ AH I+D IY+ ITG+ G F+S+I++V+ES         + +
Sbjct: 124 EKQLGGEVLELPENLWRRAAHKIADKIYEKITGDTGYFDSKIIYVAESGPDLKKVKRIAL 183

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD DGAN RY+T  +  ++  PRFS +  K+ Y +Y  +    VY  D +  +    +G+
Sbjct: 184 MDYDGANNRYITDGKS-LVLTPRFSGSADKIFYVSYATKRRTLVYEKDLKTGKES-IVGD 241

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F  +  APRF+ +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  +
Sbjct: 242 FAGISFAPRFAPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGRR 301

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKF 371
           IVF SDR G  QLY+M S+GS+ +RIS     SY  P WSP+GD IAFTK      G+ F
Sbjct: 302 IVFNSDRNGVPQLYIMNSDGSNVQRISFGG-GSYMAPSWSPRGDYIAFTKIIRGSEGKTF 360

Query: 372 AIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSIDL 423
            IGVMK     D + ER++     +++P WSP+GR ++F+            +++Y+IDL
Sbjct: 361 NIGVMKPYPQDDENSERVIASGYLVESPCWSPNGRVIMFAKGWPSNGKSSGKNRIYAIDL 420

Query: 424 NGRNETLINTPAYASDPQWVGFMD 447
            G NE  I TP  ASDP+W   ++
Sbjct: 421 TGHNEREIKTPGDASDPEWSNLLN 444


>gi|157964377|ref|YP_001499201.1| translocation protein TolB [Rickettsia massiliae MTU5]
 gi|166988078|sp|A8F168|TOLB_RICM5 RecName: Full=Protein tolB; Flags: Precursor
 gi|157844153|gb|ABV84654.1| TolB protein precursor [Rickettsia massiliae MTU5]
          Length = 444

 Score =  408 bits (1049), Expect = e-112,   Method: Composition-based stats.
 Identities = 162/445 (36%), Positives = 250/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF     + D LG  + +V+S DL+
Sbjct: 4   IIYFILSLLFSFASYALETINIEHGRADPTPIAVNKFNADNSAADVLGHDMVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    + ++ F LWD  
Sbjct: 64  LSGLFRPISAASFIEEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKFKISFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ+ G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLAGEILEVPENLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESNSLPKIK-RIA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  ++  PRF+ +  K+ Y +Y  +    VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKS-LVLTPRFARSADKIFYVSYATKRRALVYEKDLKTGKES-VVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ ++ +  IY +DL +    +LT+   IN S SYSPD  
Sbjct: 241 DFPGISFAPRFSPDGRKAVMSIAQNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGK 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYAAPSWSPRGDYIAFTKITRGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSID 422
           F IG+MK     D + ER++     +++P WSP+GR ++F+     +      +K+++ID
Sbjct: 360 FNIGIMKACPQDDENSERIITSGYLVESPCWSPNGRVIMFTKGWPSRAKAPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TPA ASDP+W G ++
Sbjct: 420 LTGHNEREIMTPADASDPEWSGVLN 444


>gi|114771186|ref|ZP_01448606.1| translocation protein TolB precursor [alpha proteobacterium
           HTCC2255]
 gi|114548111|gb|EAU50998.1| translocation protein TolB precursor [alpha proteobacterium
           HTCC2255]
          Length = 441

 Score =  408 bits (1049), Expect = e-112,   Method: Composition-based stats.
 Identities = 168/441 (38%), Positives = 255/441 (57%), Gaps = 12/441 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHA-FVKVATNSANYSPVSIAFTKFVSID----ELGGKVSE 67
           +KI +  L+  +      S     + +        P+ IA ++F +I     +   +++ 
Sbjct: 5   IKIVIIGLMFFMSKVLTLSAETKPLMIEITQGIIKPMPIALSQFTAIGDTTPQYVDQITS 64

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V+  DL  S +F  I + +     TN ++  +F DW  +    L+TG V  +G D+L ++
Sbjct: 65  VIMADLVGSGLFREIPRSAHVSANTNFNNPVKFSDWRVINVDALITGSVNIQG-DKLILQ 123

Query: 128 FRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           FRL+DV  +K +  G +F +S  +WR++AH ISD +Y  +TGE   F+SR++++SE    
Sbjct: 124 FRLFDVFAQKPLGEGLQFQASIGNWRRMAHKISDAVYSRLTGEAAYFDSRVVYISEQGPK 183

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              K  L +MD DGAN R+LT   D I+  PRFSPN +++ Y +Y+   + +VYLM+   
Sbjct: 184 NARKKRLTIMDYDGANSRFLTDDND-IVLAPRFSPNNEEIVYTSYETG-VPKVYLMNVDT 241

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + + +   M  APRFS +G+  ++S+      DIYSV L+S    RLT+   I+ +
Sbjct: 242 LNK-RVLDDQPGMTFAPRFSPDGRNVVMSLTDRGNTDIYSVVLESRRKTRLTSGPSIDTA 300

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD  QIVFESDR G++Q+Y+M S+G D  RIS  K  SY  PVWSP+GD+IAFTK 
Sbjct: 301 PSFSPDGKQIVFESDRGGRQQIYIMSSSGGDATRISFGK-GSYGTPVWSPRGDMIAFTKI 359

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNG 425
           S  +F IGVM+ DGS ERLL      + PTWSP+GR ++F R+  G  G  +++S+D+ G
Sbjct: 360 SQGRFHIGVMRTDGSNERLLTASFLDEGPTWSPNGRVIMFFRESAGTNGAPEIFSVDVTG 419

Query: 426 RNETLINTPAYASDPQWVGFM 446
           RN   + T    SDP W G +
Sbjct: 420 RNLKRVKTIQNGSDPSWSGLL 440


>gi|86139146|ref|ZP_01057716.1| translocation protein TolB precursor [Roseobacter sp. MED193]
 gi|85823990|gb|EAQ44195.1| translocation protein TolB precursor [Roseobacter sp. MED193]
          Length = 446

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 160/426 (37%), Positives = 242/426 (56%), Gaps = 10/426 (2%)

Query: 26  GFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSEVVSKDLQRSDVFNL 81
           G    + +  +++        P+  A   F++      EL  +++ V++ DL  + +F  
Sbjct: 23  GSAAQAQNGPLRIEITDGVIEPLPYAVPSFLAETPAAAELANQITRVIAADLSGTGLFRE 82

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI-I 140
           I   +    +++ ++  RF DW ++ AQ L+TG V   GK +L V FR +DV    ++  
Sbjct: 83  IPATAHISTVSDFNAPVRFADWKAVNAQALITGSVSVNGK-QLTVRFRGYDVFADNELGA 141

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G +F  +   WR++AH ++D IY  ITGE G F+SR++FVSE+      +  L +MD DG
Sbjct: 142 GLQFSGTTDGWRRMAHKVADAIYSRITGESGYFDSRVVFVSETGPKNDRRKRLAIMDYDG 201

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A ++YLT S   ++  PRFSP   +V Y +Y+     +++++D    +      +   M 
Sbjct: 202 AGVQYLTNS-SALVLAPRFSPTGDRVLYTSYESG-FPQIHVLDVGKVQRRVLSADKGIMS 259

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            APRF+ +G   + S  +    D+Y++D+ + A +RLT    I  + SYSPD SQIVFES
Sbjct: 260 FAPRFAPDGNTVVYSQAEGGNTDLYTMDIATGARQRLTRAPSIETAPSYSPDGSQIVFES 319

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           DR G  QLYVM + G + +RIS  K   Y  PVWSP+GDLIAFTK S  +F IGVM+ DG
Sbjct: 320 DRSGTPQLYVMPATGGEARRISFGK-GRYGTPVWSPRGDLIAFTKQSKGRFHIGVMRLDG 378

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSIDLNGRNETLINTPAYASD 439
           S+ERLL      + P+WSP+GR ++F+R+  G  G   LYS+D+ GRN   + TP  ASD
Sbjct: 379 SEERLLTASFLDEGPSWSPNGRVIMFTRETQGANGRALLYSVDILGRNLKPVRTPDGASD 438

Query: 440 PQWVGF 445
           P W   
Sbjct: 439 PAWSPL 444


>gi|238650751|ref|YP_002916604.1| translocation protein TolB [Rickettsia peacockii str. Rustic]
 gi|259533880|sp|C4K1V5|TOLB_RICPU RecName: Full=Protein tolB; Flags: Precursor
 gi|238624849|gb|ACR47555.1| translocation protein TolB [Rickettsia peacockii str. Rustic]
          Length = 444

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 163/445 (36%), Positives = 251/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF     + D LG  + +V+S DL+
Sbjct: 4   IIYFILSLLFSVTSYALETINIEHGRADPTPIAVNKFDADNSAADVLGHDMVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    + ++ F LWD  
Sbjct: 64  LSGLFRPISAASFIEEKTGIEYKPLFAAWRQINASLLVNGEVTKLESGKFQISFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ++G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLVGEILEVPKNLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIK-RIA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  ++  PRF+ +  K+ Y +Y  +  + VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKS-LVLTPRFARSADKIFYVSYATKRRVLVYEKDLKTGKES-VVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  
Sbjct: 241 DFPGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGK 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYAAPSWSPRGDYIAFTKITKGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSID 422
           F IG+MK     D + ER++     +++P WSP+GR ++F+            +K+++ID
Sbjct: 360 FNIGIMKACPQDDKNSERIITSGYLVESPCWSPNGRVIMFAKGWPSSAKAPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TPA ASDP+W G ++
Sbjct: 420 LTGHNEREIMTPADASDPEWSGVLN 444


>gi|229586559|ref|YP_002845060.1| translocation protein TolB [Rickettsia africae ESF-5]
 gi|259533877|sp|C3PN07|TOLB_RICAE RecName: Full=Protein tolB; Flags: Precursor
 gi|228021609|gb|ACP53317.1| TolB protein precursor [Rickettsia africae ESF-5]
          Length = 444

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 163/445 (36%), Positives = 250/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF     + D LG  + +V+S DL+
Sbjct: 4   IIYFILSLLFSVTSYALETINIEHGRADPTPIAVNKFDADNSAADVLGHDMVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    + +V F LWD  
Sbjct: 64  LSGLFRPISAASFIEEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKFKVSFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ+ G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLAGEMLEVPKNLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIK-RIA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  ++  PRF+ +  K+ Y +Y  +  + VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKS-LVLTPRFARSADKIFYVSYATKRRVLVYEKDLKTGKES-VVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  
Sbjct: 241 DFPGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGK 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYAAPSWSPRGDYIAFTKITKGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSID 422
           F IG+MK     D + E+++     +++P WSP+GR ++F+            +K+++ID
Sbjct: 360 FNIGIMKACPQDDENSEKIITSGYLVESPCWSPNGRVIMFAKGWPSSAKAPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TPA ASDP+W G ++
Sbjct: 420 LTGHNEREIMTPADASDPEWSGVLN 444


>gi|34580657|ref|ZP_00142137.1| tolB protein precursor [Rickettsia sibirica 246]
 gi|28262042|gb|EAA25546.1| tolB protein precursor [Rickettsia sibirica 246]
          Length = 444

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 164/445 (36%), Positives = 250/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF     + D LG  + +V+S DL+
Sbjct: 4   IIYFILSLLFSVTSYALETINIEHGRADPTPIAVNKFDADNSAADVLGHDMVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    + +V F LWD  
Sbjct: 64  LSGLFRPISAASFIEEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKFKVSFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ+ G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLAGEMLEVPKNLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIK-RIA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  ++  PRF+ +  K+ Y +Y  +  + VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKS-LVLTPRFARSADKIFYVSYATKRRVLVYEKDLKTGKES-VVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  
Sbjct: 241 DFPGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGK 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISF-GSGSYATPSWSPRGDYIAFTKITKGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSID 422
           F IG+MK     D + ER++     +++P WSP+GR ++F+            +K+++ID
Sbjct: 360 FNIGIMKACPQDDENSERIITSGYLVESPCWSPNGRVIMFAKGWPSSAKAPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TPA ASDP+W G ++
Sbjct: 420 LTGHNEREIMTPADASDPEWSGVLN 444


>gi|254464281|ref|ZP_05077692.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacterales
           bacterium Y4I]
 gi|206685189|gb|EDZ45671.1| Tol-Pal system beta propeller repeat protein TolB [Rhodobacterales
           bacterium Y4I]
          Length = 441

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 156/417 (37%), Positives = 238/417 (57%), Gaps = 10/417 (2%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVS----EVVSKDLQRSDVFNLISQDSFKQK 90
            +++  +     P+  A   FV       + +     V++ DL  + +F  +   +   K
Sbjct: 27  PLRIEIDQGVIEPLPYAVPDFVPETPAAAEYAAEIARVIASDLSGTGLFREVPASAHISK 86

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPA 149
           +T  D   +F DW ++ AQ L+TG V   G   L V FR +DV   K++    +F  +  
Sbjct: 87  VTAFDGPVKFADWKAVNAQALITGAVSVTGNG-LTVRFRGYDVFAEKELETALQFTGTTD 145

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            WR++AH ++D IY  ITGE G F+SR+++VSES      +  L VMD DGAN++YLT S
Sbjct: 146 GWRRMAHKVADAIYSEITGESGYFDSRVVYVSESGPKNDRRKRLAVMDYDGANVQYLTNS 205

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              I+  PRFSP   +V Y +Y+     +++++D    +         +M  APRF+ +G
Sbjct: 206 AS-IVLAPRFSPAGDRVLYTSYESG-FPQIHVLDVGQVQRKVLSSGDGTMSFAPRFAPDG 263

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +  + S  +    D++++D+++ A  RLT+   I  + S+SPD SQIVFESDR G +QLY
Sbjct: 264 RTIVYSQTQGGNTDLFAMDIETGAKTRLTSAPSIETAPSFSPDGSQIVFESDRSGSQQLY 323

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           VM + G + +RIS   E  Y  PVWSP+GD++AFTK +  +F IGVM+ DGS+ERLL   
Sbjct: 324 VMPAGGGEARRISF-GEGRYGTPVWSPRGDMVAFTKQNKGRFHIGVMRTDGSEERLLTAS 382

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSIDLNGRNETLINTPAYASDPQWVGF 445
              + PTW+P+GR ++F+R+  G +G   LYS+D+ GRN   + TP  ASDP W   
Sbjct: 383 FLDEGPTWAPNGRVIMFTRESQGSSGRALLYSVDITGRNLKPVKTPDGASDPSWSPL 439


>gi|67458884|ref|YP_246508.1| translocation protein TolB [Rickettsia felis URRWXCal2]
 gi|75536675|sp|Q4UM77|TOLB_RICFE RecName: Full=Protein tolB; Flags: Precursor
 gi|67004417|gb|AAY61343.1| TolB protein precursor [Rickettsia felis URRWXCal2]
          Length = 444

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 164/445 (36%), Positives = 251/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQ 74
           ++  ++   F    +A   +        P  IA  KF     + D +G  V +V+S DL+
Sbjct: 4   IIYFILSLLFSFKGYALETINIEHGRADPTPIAVNKFNADSSADDVVGHDVVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    +L++ F LWD  
Sbjct: 64  LSGLFRPISSASFIEEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKLKISFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ+ G+   +    WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLAGEILEAPENLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESTSLPKIK-RIA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  ++  PRF+ +  K+ Y +Y  +    VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKS-LVLTPRFARSADKIFYVSYATKRRALVYEKDLKTGKES-VVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  
Sbjct: 241 DFSGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGK 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYTAPSWSPRGDYIAFTKITRGAEGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSID 422
           F IG+MK     D + ER++     +++P WSP+GR ++F+     +      +K+++ID
Sbjct: 360 FNIGIMKACPQDDENSERIITSGYLVESPCWSPNGRVIMFAKGWPSRAKAPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TPA ASDP+W G ++
Sbjct: 420 LTGHNEREIITPADASDPEWSGVLN 444


>gi|126737227|ref|ZP_01752962.1| translocation protein TolB precursor [Roseobacter sp. SK209-2-6]
 gi|126721812|gb|EBA18515.1| translocation protein TolB precursor [Roseobacter sp. SK209-2-6]
          Length = 445

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 164/447 (36%), Positives = 255/447 (57%), Gaps = 13/447 (2%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIH---AFVKVATNSANYSPVSIAFTKF----VSIDE 60
               +  +   L+LVL G F   S       +++        P+  A   F     +  E
Sbjct: 1   MRSSSTSLAAGLMLVLAGLFAAASAQAQSGPLRIEITDGVIEPLPYAAPSFIADNAAAAE 60

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           L  +++ VV+ DL  + +F  +   +   K+++ ++  RF DW ++ AQ L+TG V  +G
Sbjct: 61  LAREITRVVASDLSGTGLFREVPASAHISKVSDFNAPVRFADWKAVNAQALITGSVSAQG 120

Query: 121 KDRLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
            ++L V FR +DV   K++  G +F  +   WR++AH ++D IY  ITGE G F+SR+++
Sbjct: 121 -NQLTVRFRGYDVFAEKELGSGLQFNGTKEGWRRMAHKVADAIYSRITGESGYFDSRVVY 179

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           VSE+      +  L +MD DGAN++YLT S   ++  PRFSP   +V Y +Y+     ++
Sbjct: 180 VSETGPKNDRRKRLAIMDYDGANVQYLTDS-SALVLAPRFSPTGDRVLYTSYESG-FPQI 237

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +++D    +      +   M  APRF+ +G+  + S       D++++D+ + + +RLT+
Sbjct: 238 HVLDVGRVQRRVLSADQGIMTFAPRFAPDGRTVVYSQTAGGNTDLFTMDIANGSRKRLTS 297

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              I  + S+SPD SQIVFESDR G +QLYVM ++G + +RIS  K   Y  PVWSP+GD
Sbjct: 298 APSIETAPSFSPDGSQIVFESDRSGSQQLYVMPASGGEARRISFGK-GRYGTPVWSPRGD 356

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-L 418
           LIAFTK S  +F IGVM+ DGS+ERLL      + P+WSP+GR ++F+R+  G  G   L
Sbjct: 357 LIAFTKQSKGRFHIGVMRTDGSEERLLTASFLDEGPSWSPNGRVIMFTRETQGANGRALL 416

Query: 419 YSIDLNGRNETLINTPAYASDPQWVGF 445
           YS+D+ GRN   + TP  ASDP W   
Sbjct: 417 YSVDILGRNLKPVRTPDGASDPAWSPL 443


>gi|255262012|ref|ZP_05341354.1| Tol-Pal system beta propeller repeat protein TolB [Thalassiobium
           sp. R2A62]
 gi|255104347|gb|EET47021.1| Tol-Pal system beta propeller repeat protein TolB [Thalassiobium
           sp. R2A62]
          Length = 441

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 162/441 (36%), Positives = 249/441 (56%), Gaps = 11/441 (2%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAF-VKVATNSANYSPVSIAFTKFVSIDE----LGGKVS 66
            +   L + ++ +G        A  + +        P+  A   F + ++    +   +S
Sbjct: 3   RVLTCLMVGVLTLGVLIAQGARAQPLSITITDGVIEPLPFAVPSFQAENQSAAQVAADLS 62

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            V+++DL  + +F  I   +F  +I+   +  +F DW ++  Q LVTG V   G D+L V
Sbjct: 63  RVIAEDLTGTGLFRQILASAFISQISAFSAPIQFADWRAINTQALVTGVVSVNG-DQLTV 121

Query: 127 EFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           +FRL+DV    ++  G++   + + WR++AH +SD +Y  ITGE G F+SR++FVSE+  
Sbjct: 122 KFRLYDVFSGAELGAGQQLAGTVSGWRRMAHKVSDQVYSRITGEGGYFDSRVVFVSETGP 181

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
               +  L +MD DGAN+++LT S   I+  PRFSPN  +V Y +Y+     R+ ++D  
Sbjct: 182 KNDRRKRLAIMDYDGANVQFLTDSAS-IVLAPRFSPNGDRVLYTSYETG-FPRINILDVA 239

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +       M  +PRFS +G++ + S+      DIY  DL S +  RLT+   I  
Sbjct: 240 SVGRQQLATADGEMAFSPRFSRDGRQVIYSIANGGNTDIYRSDLASGSNARLTSAPSIET 299

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + S+SPD SQIVFESDR G +QLY+M ++G + +RIS   +  Y  PVWSP+GDL+AFTK
Sbjct: 300 APSFSPDGSQIVFESDRSGTQQLYIMSASGGEPRRISF-GDGRYGTPVWSPRGDLVAFTK 358

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLN 424
            +  +F IGVM+ DGS+ERLL      + PTWSP+GR ++F+R+  G D    LYS+D+ 
Sbjct: 359 QNAGRFHIGVMRTDGSEERLLTASFLDEGPTWSPNGRVIMFTRETQGADGAPALYSVDIT 418

Query: 425 GRNETLINTPAYASDPQWVGF 445
           GRN   + T   ASDP W   
Sbjct: 419 GRNLKRVTTSNAASDPSWGPL 439


>gi|157828282|ref|YP_001494524.1| translocation protein TolB [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|166229989|sp|A8GRJ1|TOLB_RICRS RecName: Full=Protein tolB; Flags: Precursor
 gi|157800763|gb|ABV76016.1| translocation protein TolB precursor [Rickettsia rickettsii str.
           'Sheila Smith']
          Length = 444

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 162/445 (36%), Positives = 252/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF     + D LG  + +V+S DL+
Sbjct: 4   IIYFILSLLFSVTSYALETINIEHGRADPTPIAVNKFYADNSAADVLGHDMVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    + ++ F LWD  
Sbjct: 64  LSGLFRPISAASFIEEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKFQISFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ++G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLVGEILEVPKNLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIK-RIA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  ++  PRF+ +  K+ Y +Y  +  + VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKS-LVLTPRFARSADKIFYVSYATKRRVLVYEKDLKTGKES-VVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD +
Sbjct: 241 DFPGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGT 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYAAPSWSPRGDYIAFTKITKGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSID 422
           F IG+MK     + + ER++     +++P WSP+GR ++F+            +K+++ID
Sbjct: 360 FNIGIMKACPQDNKNSERIITSGYLVESPCWSPNGRVIMFAKGWPSSSKAPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TPA ASDP+W G ++
Sbjct: 420 LTGHNEREIMTPADASDPEWSGVLN 444


>gi|165932986|ref|YP_001649775.1| translocation protein TolB [Rickettsia rickettsii str. Iowa]
 gi|189035986|sp|B0BWZ3|TOLB_RICRO RecName: Full=Protein tolB; Flags: Precursor
 gi|165908073|gb|ABY72369.1| TolB [Rickettsia rickettsii str. Iowa]
          Length = 444

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 162/445 (36%), Positives = 252/445 (56%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF----VSIDELGGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF     + D LG  + +V+S DL+
Sbjct: 4   IIYFILSLLFSVTSYALETINIEHGRADPTPIAVNKFYADNSAADVLGHDMVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    + ++ F LWD  
Sbjct: 64  LSGLFRPISAASFIEEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKFQISFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ++G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLVGEILEVPKNLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIK-RIA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  ++  PRF+ +  K+ Y +Y  +  + VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKS-LVLTPRFARSADKIFYVSYATKRRVLVYEKDLKTGKES-VVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD +
Sbjct: 241 DFPGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGT 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYAAPSWSPRGDYIAFTKITKGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSID 422
           F IG+MK     + + ER++     +++P WSP+GR ++F+            +K+++ID
Sbjct: 360 FNIGIMKACPQDNKNSERIITSGYLVESPCWSPNGRVIMFAKGWPSSAKAPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TPA ASDP+W G ++
Sbjct: 420 LTGHNEREIMTPADASDPEWSGVLN 444


>gi|110833619|ref|YP_692478.1| tolB protein [Alcanivorax borkumensis SK2]
 gi|110646730|emb|CAL16206.1| tolB protein [Alcanivorax borkumensis SK2]
          Length = 440

 Score =  405 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 101/447 (22%), Positives = 201/447 (44%), Gaps = 8/447 (1%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M     + +    KI + + + L+   +  S  A + +         V IA   F     
Sbjct: 1   MIGVLRMQQTCKRKIWMQISVALVTSLWMISAQAELLIKVTEGRVDAVPIAVVPFDGAKN 60

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
               VS +V  DL RS  F  +       +  N   +  ++D+  LG + ++TG + ++ 
Sbjct: 61  AEEDVSAIVQADLHRSGQFKPLPPQDMLSRPRNEQEMI-YRDFKVLGTEYVITGSMKRQE 119

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                V + L+DV  +K+++ + +    +  R +AH ISD IY+ +TG  G F+++IL+V
Sbjct: 120 TGGYEVGYALFDVARQKKLMSETYRPPASQLRDVAHAISDRIYEQLTGIPGAFSTKILYV 179

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           + +         L   D DG  +  +  S + I   P +SP+ +K+AY +++D+    +Y
Sbjct: 180 THNRH-DANPYQLQYADADGHRVTTILRSNEPI-MSPTWSPDGRKIAYVSFEDQGRPGIY 237

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + +       +++ +F  +  AP +S +G+   +++ +D   +IY ++L +    RLTN 
Sbjct: 238 IHNLATTE-REKVSSFSGINGAPDWSPDGQHLALTLSRDGNPEIYMLNLSTKVLTRLTNN 296

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+    + PD   +VF S R G  Q+Y +  N    +R+S     +    V +P G  
Sbjct: 297 YGIDTEPRWLPDGEHLVFTSSRSGGPQIYKLNINDKSVRRVSFQGGYNARSDV-TPDGRY 355

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + +       + +GV         ++      ++P+ +P+G  +I+  +  G     L +
Sbjct: 356 LVYVHRRNGNYNVGVQDLQRGTFNIVTRTDMDESPSVAPNGSMVIYGTQHGG--AGVLEA 413

Query: 421 IDLNGR-NETLINTPAYASDPQWVGFM 446
           + ++GR    L +      +P W  F+
Sbjct: 414 VSIDGRVKVELPSKEGEVREPAWSPFL 440


>gi|114570966|ref|YP_757646.1| TolB domain-containing protein [Maricaulis maris MCS10]
 gi|114341428|gb|ABI66708.1| TolB, N-terminal domain protein [Maricaulis maris MCS10]
          Length = 453

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 161/454 (35%), Positives = 246/454 (54%), Gaps = 21/454 (4%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE----LGGKVSE 67
            + +    LL LIG    +     ++V     N  P+ IA   FV   +     G  ++ 
Sbjct: 3   RIFVLFAALLALIGWSAASDAQEPLRVDVTQGNLDPMPIAVPDFVGASDEALRRGADITR 62

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           VV+ DL  S +F  + QD+F + I N D  PRF DW  + A  L+ G V  +   RL V 
Sbjct: 63  VVANDLASSGLFAPVDQDAFIEDIANIDLRPRFSDWRVINADALLVGSVTIQEDGRLVVG 122

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE-SVVS 186
           FRLWD +  +Q++G ++ ++P +WR++AH ++D +Y+ +TGE G FN+RI++VSE   + 
Sbjct: 123 FRLWDTRLEEQLLGLQYRTAPENWRRVAHRLADAVYERLTGETGYFNTRIVYVSEGRGIE 182

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     L +MD+DGAN  +LT  R  +   P +SP+ Q++ Y ++ D      YL +   
Sbjct: 183 GEPIRQLALMDQDGANPSFLTD-RSYMALLPNYSPSAQEITYVSFLDGQA-TTYLYNLET 240

Query: 247 DRAPKRIGNFR----------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            R      +               L+ RFS +G    +S++     DI+  DLQ+   +R
Sbjct: 241 GRQEALFASGGAGAASQVDPDGQSLSARFSPDGSELAVSIETRSGHDIHLFDLQTRNLQR 300

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT     ++  S++PD  +IVF S R G  QLYVM  +GSD +RI+      Y  PVWSP
Sbjct: 301 LTQHPADDVEPSFAPDGERIVFSSARGGGSQLYVMNRDGSDVQRITF-GSGRYTTPVWSP 359

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSR--KKDGD 413
           +GDLIAFTK  G +F++GV++ DGS  ER+L E   +  P WSP+GR L+F+R  ++   
Sbjct: 360 RGDLIAFTKQVGGQFSLGVVRADGSGIERILFEGYFVDTPAWSPNGRVLLFTRGEQRANG 419

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           T  +++S+DL G N   + T   ASDP W   ++
Sbjct: 420 TRYEIWSVDLAGFNLRRLATGGMASDPAWSPLIE 453


>gi|56697941|ref|YP_168312.1| translocation protein TolB [Ruegeria pomeroyi DSS-3]
 gi|67461891|sp|Q5LNU4|TOLB_SILPO RecName: Full=Protein tolB; Flags: Precursor
 gi|56679678|gb|AAV96344.1| TolB, putative [Ruegeria pomeroyi DSS-3]
          Length = 439

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 162/417 (38%), Positives = 242/417 (58%), Gaps = 10/417 (2%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDE----LGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
            +++  +     P+  A   FV           +++ V++ DL  S +F  I   ++  +
Sbjct: 25  PLRITIDEGIIEPLPYAAPNFVPDSPAAAEYAAEIARVLAADLTGSGLFREIPSTAYISQ 84

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII-GKKFFSSPA 149
           +T+ D+  +F DW ++ AQ L+TG V   G +RL V FRLWDV    ++  G +F  +  
Sbjct: 85  VTSFDAPVQFADWKAINAQALITGAVSVSG-NRLTVRFRLWDVFAGAELGSGLQFAGTTD 143

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            WR+++H ++D +Y  ITGE G F+SR+ FVSES      +  L +MD DGAN++YLT S
Sbjct: 144 GWRRMSHKVADAVYSRITGESGYFDSRVAFVSESGPKDQRRKRLAIMDYDGANVQYLTDS 203

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              I+  PRFSP   +V Y +Y      R++++D    +         +M  APRFS +G
Sbjct: 204 SS-IVLAPRFSPTGDRVLYTSY-QGGFPRIHILDVGQVQQRVLQSQDGTMSFAPRFSPDG 261

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +  L S+ +    D+Y++++ S  + RLT+   I  + SY+PD S+IVFESDR G  QLY
Sbjct: 262 QTVLFSLAQGGNTDLYAMNIASGQSTRLTSAPSIETAPSYAPDGSRIVFESDRSGTPQLY 321

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           VM + G +  RIS   +  Y  PVWSP+GDLIAFTK S  +F IGVM+ DGS+ERLL   
Sbjct: 322 VMSAAGGEATRISF-GQGRYGTPVWSPRGDLIAFTKQSKGRFHIGVMRADGSEERLLTAS 380

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQWVGF 445
              + PTWSP+GR ++F+R+  G +G + LYS+D++GRN   + TP   SDP W   
Sbjct: 381 FLDEGPTWSPNGRVIMFTRETQGASGRAALYSVDISGRNLRPVRTPDGGSDPSWSPL 437


>gi|254490151|ref|ZP_05103342.1| Tol-Pal system beta propeller repeat protein TolB [Methylophaga
           thiooxidans DMS010]
 gi|224464637|gb|EEF80895.1| Tol-Pal system beta propeller repeat protein TolB [Methylophaga
           thiooxydans DMS010]
          Length = 432

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 108/431 (25%), Positives = 219/431 (50%), Gaps = 11/431 (2%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID-ELGGKVSEVVSKDLQRSDVF 79
           + L+    P   HA + +     + + + IA   F +        +SE+VS DL  S  F
Sbjct: 9   IALLIALLPWPAHALLTIEITGGSEAALPIAIVPFGTEGFAPPEDLSEIVSNDLASSGRF 68

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
             + +     +    + +  F DW  L ++ L+ G+V  +  +  +V+F+L+DV   +Q+
Sbjct: 69  APLEKRDLISQPHESEQV-NFADWRLLRSEGLLIGKVSSQDGENYQVQFQLFDVYKAEQL 127

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDR 198
           +GK++    +  R + H I+D +Y+++TGEKG F++R+ FVS      G  + +L V D 
Sbjct: 128 VGKRYQVPASGLRNLGHQIADIVYETLTGEKGVFSTRLAFVSEMKNADGSKRYALQVSDA 187

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DGAN R +  S   I   P ++P+ +++ Y ++++     VY+      R    + +F  
Sbjct: 188 DGANPRTVLQSTQPI-LSPNWAPDGEQLTYVSFENGKA-EVYVQQLSSGRRNS-VASFEG 244

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIV 317
           +  AP +S +GK+  +++ K+   +IY ++L S    R+T N+  I+  A + P   +I+
Sbjct: 245 LNTAPAWSPDGKKLALTLSKNGNPEIYVMELASGNLSRVTHNSQAIDTEAVWMPSGREIL 304

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SDR G+ Q+Y + ++G   +R++ +   +      SP G +++       +F I V  
Sbjct: 305 FTSDRGGRPQIYRVDASGGRAERVTFEGGYNASA-DISPDGRMMSMVHSVNGRFHIAVQD 363

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                 ++L + +  ++P+++P+GR ++++ ++ G     L ++ ++GR +  +     A
Sbjct: 364 LQTGTVQVLTDTTGDESPSFAPNGRMILYATEQKGRGI--LAAVSVDGRIKQRLGESGSA 421

Query: 438 -SDPQWVGFMD 447
             +P W  F +
Sbjct: 422 VREPAWSPFRN 432


>gi|119371033|sp|Q0VRJ2|TOLB_ALCBS RecName: Full=Protein tolB; Flags: Precursor
          Length = 434

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 100/441 (22%), Positives = 200/441 (45%), Gaps = 8/441 (1%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           + +    KI + + + L+   +  S  A + +         V IA   F         VS
Sbjct: 1   MQQTCKRKIWMQISVALVTSLWMISAQAELLIKVTEGRVDAVPIAVVPFDGAKNAEEDVS 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  +       +  N   +  ++D+  LG + ++TG + ++      V
Sbjct: 61  AIVQADLHRSGQFKPLPPQDMLSRPRNEQEMI-YRDFKVLGTEYVITGSMKRQETGGYEV 119

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            + L+DV  +K+++ + +    +  R +AH ISD IY+ +TG  G F+++IL+V+ +   
Sbjct: 120 GYALFDVARQKKLMSETYRPPASQLRDVAHAISDRIYEQLTGIPGAFSTKILYVTHNRH- 178

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L   D DG  +  +  S + I   P +SP+ +K+AY +++D+    +Y+ +   
Sbjct: 179 DANPYQLQYADADGHRVTTILRSNEPI-MSPTWSPDGRKIAYVSFEDQGRPGIYIHNLAT 237

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               +++ +F  +  AP +S +G+   +++ +D   +IY ++L +    RLTN   I+  
Sbjct: 238 TE-REKVSSFSGINGAPDWSPDGQHLALTLSRDGNPEIYMLNLSTKVLTRLTNNYGIDTE 296

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             + PD   +VF S R G  Q+Y +  N    +R+S     +    V +P G  + +   
Sbjct: 297 PRWLPDGEHLVFTSSRSGGPQIYKLNINDKSVRRVSFQGGYNARSDV-TPDGRYLVYVHR 355

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               + +GV         ++      ++P+ +P+G  +I+  +  G     L ++ ++GR
Sbjct: 356 RNGNYNVGVQDLQRGTFNIVTRTDMDESPSVAPNGSMVIYGTQHGG--AGVLEAVSIDGR 413

Query: 427 -NETLINTPAYASDPQWVGFM 446
               L +      +P W  F+
Sbjct: 414 VKVELPSKEGEVREPAWSPFL 434


>gi|114327770|ref|YP_744927.1| translocation protein TolB [Granulibacter bethesdensis CGDNIH1]
 gi|114315944|gb|ABI62004.1| tolB protein [Granulibacter bethesdensis CGDNIH1]
          Length = 452

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 165/445 (37%), Positives = 244/445 (54%), Gaps = 10/445 (2%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M LR       +       L          +      +  + A  +P+ IA   F    +
Sbjct: 16  MGLRRRDMLGFSAAALAAPLGFAGPAMAQQAAGQSAVIDVDRARTAPIPIAIPSFGGGSQ 75

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           L   ++ V++ DL+RS +F +++  ++ Q+      +P FQ W ++GAQ LVTG V   G
Sbjct: 76  LAQDMAGVIAADLERSGLFRIVAPGAYPQQ---SGDVPNFQSWGAIGAQALVTGNVSGSG 132

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
              +RVEFRLWDV  ++QI G  + ++  +WR+I+H I+D IY+ + GEKG F++RI++V
Sbjct: 133 -GSVRVEFRLWDVLPQQQIQGTAYTTTSGNWRRISHIIADVIYERMLGEKGYFDTRIVYV 191

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S +         L VMD+D AN RYLT     ++  PRF P + ++ + +Y +    RVY
Sbjct: 192 SNTGPRTNRTKRLAVMDQDSANNRYLTDG-SWMVLTPRFHPTRDEIVFMSYANNRP-RVY 249

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +       + +G +  M  APRFS +G   ++S+ +    DIY V L      +LTN+
Sbjct: 250 TFNLATGGQ-RMLGEWPGMTFAPRFSPDGSSVVMSMTRGGGSDIYVVGLGGGGHRQLTNS 308

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+ S  +SPD SQIVF SDR G +QLYVM ++GS  +RIS      Y  PVWSP+GDL
Sbjct: 309 GSIDTSPCFSPDGSQIVFNSDRGGDQQLYVMGADGSGVRRISF-GSGRYATPVWSPRGDL 367

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           IAFT+     + IGVMK DGS ER+L +  +++ PT+ P+GR L+F     G    KL S
Sbjct: 368 IAFTRLGSSAWNIGVMKPDGSGERILAQGYDVEGPTFCPNGRVLMFWSASGGRQ--KLVS 425

Query: 421 IDLNGRNETLINTPAYASDPQWVGF 445
           +D+ G NE  + TP  ASDP W   
Sbjct: 426 VDITGFNERPVPTPTDASDPAWSPL 450


>gi|292490341|ref|YP_003525780.1| Tol-Pal system beta propeller repeat protein TolB [Nitrosococcus
           halophilus Nc4]
 gi|291578936|gb|ADE13393.1| Tol-Pal system beta propeller repeat protein TolB [Nitrosococcus
           halophilus Nc4]
          Length = 430

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 122/437 (27%), Positives = 217/437 (49%), Gaps = 10/437 (2%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG-GKVSEVV 69
           + MK+   +L + I      ++ A + +       + + IA   F S   +    V+ VV
Sbjct: 1   MGMKVWSKILWLWILLVPTQNVSAVLTIEITGGTEAALPIAIVPFGSQGGIPPEDVAAVV 60

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           + DL RS  F  + +     +      I  F DW  LG++ LV G V   G DR  V F+
Sbjct: 61  AADLARSGRFAPLPEKDLLSRPHRASEI-EFHDWRRLGSEGLVIGEVTHLGADRYGVRFQ 119

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGI 188
           L+D+   +Q++G+++       R +AH I+D IY+++TGEKG F +RI FV+ S  V G 
Sbjct: 120 LFDIYKAEQLVGRRYQVPATGLRHLAHQIADLIYETLTGEKGAFTTRIAFVTVSKAVDGA 179

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            + SL V D DG N   +  S++ I   P +SP+  K+AY +++ +    V + + R  R
Sbjct: 180 KEYSLQVADVDGHNPHTILQSKEPI-MSPVWSPDGTKLAYVSFERKRS-EVIVQELRTGR 237

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             + + +F  +  AP +S +G++  + + K+   +IY +DL +    RLT    I+   +
Sbjct: 238 -RQSVASFPGINSAPDWSPDGRKLALVLSKEGNPEIYILDLATRRLTRLTRNASIDTEPT 296

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++PD   IVF SDR G+ QLY + ++G   +R++ D   +     ++P G  +A      
Sbjct: 297 WAPDGRSIVFTSDRGGRPQLYQISASGGQAQRLTFDGTYNASA-SFAPDGQRLALVHGDK 355

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +F I V+       ++L E    ++P+++P+GR ++++    G  G  L ++  +GR  
Sbjct: 356 GQFHIAVLDLASKDLQVLTETRMDESPSFAPNGRMILYATS--GPQGGALAAVSTDGRVR 413

Query: 429 TLINTPAY-ASDPQWVG 444
             +        +P W  
Sbjct: 414 QRLAQKGDEVREPAWSP 430


>gi|15604171|ref|NP_220686.1| translocation protein TolB [Rickettsia prowazekii str. Madrid E]
 gi|6647892|sp|Q9ZDM5|TOLB_RICPR RecName: Full=Protein tolB; Flags: Precursor
 gi|3860863|emb|CAA14763.1| TOLB PROTEIN PRECURSOR (tolB) [Rickettsia prowazekii]
 gi|292571902|gb|ADE29817.1| TolB protein precursor [Rickettsia prowazekii Rp22]
          Length = 443

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 170/444 (38%), Positives = 248/444 (55%), Gaps = 20/444 (4%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE----LGGKVSEVVSKDLQR 75
           ++  I   F  + +A   +        P  IA  KF +       +G  V +V+S DL+ 
Sbjct: 4   IVYFILTLFSLTSYALETINIEHGRVDPTPIAVNKFNADSSNNDLVGRDVVKVISNDLKI 63

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F  IS  SF ++ T     P F  W  + A +LV G V      +L++ F LWD   
Sbjct: 64  SGLFRPISSASFIEEQTGIKYKPLFAAWRQINASLLVNGEVKTLENGKLKISFILWDTFL 123

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            KQ+ G  F      WR+ AH I+D IY+ ITG+ G F+++I++VSES V   IK  + +
Sbjct: 124 EKQLTGALFEVPTKLWRRAAHKIADKIYEKITGDPGYFDTKIVYVSESTVLPKIK-RIAL 182

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD DGAN +YLT  +  ++  PRF+ +  K+ Y +Y  +    VY  D +  +    +G+
Sbjct: 183 MDYDGANNKYLTNGKS-LVLTPRFAHSADKIFYVSYATKSRALVYEKDLKTGKES-VVGD 240

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F  +  APRFS +GK+A++S+ K+ +  IY +DL +    +LTN   IN S SYSPD  +
Sbjct: 241 FVGISFAPRFSPDGKKAVMSIAKNGSTHIYEIDLATKQLNKLTNGFGINTSPSYSPDGKK 300

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---KFSGEK-F 371
           IVF SD+ G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFT   +  GEK F
Sbjct: 301 IVFNSDKNGVPQLYIMNSDGSDVQRISF-GVGSYASPSWSPRGDYIAFTKIIRQDGEKTF 359

Query: 372 AIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSIDL 423
            IG+MK      G+ ER++     + +P WSP+GR ++FS     K +    +K+++IDL
Sbjct: 360 NIGIMKAYPQDHGNSERIITSGYLVDSPCWSPNGRVIMFSKGWPSKANAPGKNKIFTIDL 419

Query: 424 NGRNETLINTPAYASDPQWVGFMD 447
            G NE  I TPA ASDP+W G ++
Sbjct: 420 TGHNEREIITPADASDPEWSGILN 443


>gi|239995973|ref|ZP_04716497.1| Periplasmic component of the Tol biopolymer transport system
           [Alteromonas macleodii ATCC 27126]
          Length = 451

 Score =  404 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 111/455 (24%), Positives = 203/455 (44%), Gaps = 31/455 (6%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
            L L + LI   F   + A +++       +  P+ +   K+     + G +S+VV  DL
Sbjct: 3   KLGLWIALITMAFSAKVFASLEIVITEGVDSARPIGVVPFKWKGQGSMPGDISKVVMADL 62

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  FN +S D   Q     + +  F  W +LG   ++ G +  +G DR  V + L DV
Sbjct: 63  MRSGKFNPVSVDKMPQYPETAEQVS-FTAWATLGVDTVLVGSIEPQGGDRYLVSYELIDV 121

Query: 134 KDRKQ--------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
              +                     +  ++   +   +R+ AH ISD +Y+ +TG +G F
Sbjct: 122 LKGQVDNGQAKVLKDGNLVSSNDHVLAARQAVINGRDFRQYAHRISDIVYEKLTGVRGAF 181

Query: 174 NSRILFVSESVVSGIIK-NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            ++I +V       + K   L + D DG N   L  S  + L  P +SP+ +K+AY +++
Sbjct: 182 LTKIAYVIVRDRDTVEKPYQLVIADYDGENETRLL-SSPEPLMSPVWSPDGEKLAYVSFE 240

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           +    ++++ +        RI +F  +  +P FS +GK+  + + KD   ++Y +DL + 
Sbjct: 241 NRRP-QIFIQNIYTSE-RTRITDFPGINSSPVFSPDGKQLAMVLSKDGNPELYVMDLATK 298

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              R+T    I+   ++ PD S ++F S+R GK Q+Y +  N    +R++   E +    
Sbjct: 299 NLRRVTRNRAIDTEPAWLPDGSGLIFSSERGGKPQIYSVNLNSGKVRRVTFVGEQNLGG- 357

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             SP G  +     +   + I     DG   ++L      ++P+ +P+G  +I+S   +G
Sbjct: 358 TISPDGKQMIMVNQTNGNYHIAKQSLDGGSPQVLTRTYLDESPSVAPNGSMIIYSTLHEG 417

Query: 413 DTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
                L  + L+GR +  L         P W  F+
Sbjct: 418 TQVLSL--VSLDGRFKARLPAANGQVKSPSWSPFL 450


>gi|197284481|ref|YP_002150353.1| translocation protein TolB [Proteus mirabilis HI4320]
 gi|194681968|emb|CAR41400.1| TolB protein [Proteus mirabilis HI4320]
          Length = 432

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 110/446 (24%), Positives = 200/446 (44%), Gaps = 19/446 (4%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGG 63
            + + LN+   L +L V       T  +A V++          P+ +   K+    ++  
Sbjct: 1   MMKQALNVIFGLLILCV------TTLANAEVRIEITQGVNTARPIGVVPFKWEGTGQMPE 54

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
            ++ V++ DL+ S  FN I  +   Q+      + +   W +LG   +V GRV      +
Sbjct: 55  DIAGVIAADLRNSGKFNPIDMNRLPQQPVTASEV-QPALWTALGIDSVVVGRVQPSADGQ 113

Query: 124 LRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             V ++L DV       +   ++  S    R  AHT SD+I++ +TG +G F +RI +V 
Sbjct: 114 YVVSYQLVDVAGSPGAVLAQSEYKISNKWLRYAAHTASDEIFEKLTGIRGAFRTRIAYVV 173

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +   G     L V D DG N   +  S  Q L  P +SP+  K+AY T++        +
Sbjct: 174 VTN-GGAYPYELRVSDYDGFNQDRVYRS-SQPLMSPAWSPDGAKLAYVTFESGQ--SALV 229

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           + T      ++I +F     AP FS +G +   ++ K  ++++Y +DL S    ++TN  
Sbjct: 230 VQTLATGEVRQIASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMDLASGNMTQVTNGR 289

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             N   ++ PD   +V+ SD+ G+ Q+Y +  NG   +RI+ + + +  +P  SP G  +
Sbjct: 290 SNNTEPTWMPDGQTLVYTSDQGGRPQIYKININGGTPERITWEGKQNQ-NPAVSPDGSFL 348

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   +  I     + +  + L +    + P+ +P+G  +I+S  +    G+ L  +
Sbjct: 349 VMVSSESGRQHIAKQDLETNAVQYLTDTFLDETPSIAPNGTMVIYSSTQG--LGTILRLV 406

Query: 422 DLNGRNE-TLINTPAYASDPQWVGFM 446
             +GR +  L  T      P W  FM
Sbjct: 407 STDGRFKARLPATDGQVKSPAWSPFM 432


>gi|119383438|ref|YP_914494.1| translocation protein TolB [Paracoccus denitrificans PD1222]
 gi|119373205|gb|ABL68798.1| TolB, N-terminal domain protein [Paracoccus denitrificans PD1222]
          Length = 461

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 150/446 (33%), Positives = 241/446 (54%), Gaps = 11/446 (2%)

Query: 9   EELNMKINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKFVSIDELGGKV 65
             +  K  L  ++ L G      + A    +++        P+  A  +F      G  +
Sbjct: 18  RNMLRKFLLTSVMALAGFGLAAPVLAQDGPLRIEITDGVIEPMPFAIARFHDEGGAGEYL 77

Query: 66  SEV---VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
           ++V   ++ DL  + +F  I   +   +  + ++   ++DW ++ AQ L+TG V  +G  
Sbjct: 78  AQVQNLIAADLTGTGLFREIPASAHIARPESFEAPVSYEDWKAINAQALITGSVKVQGGK 137

Query: 123 RLRVEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            +  +FRL+DV   + +  G +F +S  +WR+ AH  +D +Y  +TGE   F+SR+ FV 
Sbjct: 138 VVV-KFRLFDVFAGQPLGDGMQFDASTGNWRRAAHKAADQVYSRLTGEGPYFDSRVAFVQ 196

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E+      +  + +MD DGAN+++LT     ++ +PRFSP+  ++ Y +Y       + +
Sbjct: 197 ETGPKDARRKRIGIMDYDGANVKWLTDD-STLVLKPRFSPDGSRLLYTSYATGFPQAMMM 255

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
               +       G   +M  +PRFS +G+  + S++++   DIY +D  + A   LTN  
Sbjct: 256 DVNSLAARQLGAGQQGTMSFSPRFSPDGRWIVYSLEQNGNTDIYQMDAATGAQRALTNAP 315

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I  S SYSPD  QIVFESDR G  QLYVM +NG + +RIS   E  Y  PVWSP+GD+I
Sbjct: 316 SIETSPSYSPDGKQIVFESDRSGTPQLYVMGANGGEPRRISF-GEGRYGTPVWSPRGDMI 374

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-KKDGDTGSKLYS 420
           AFT+  G KF IGVM+ DGS+E++L E    + PTW+P+GR ++F+R    GD   +L+S
Sbjct: 375 AFTRQVGGKFHIGVMRTDGSEEKMLTESFLDEGPTWAPNGRVVMFTRVTPGGDGQPRLHS 434

Query: 421 IDLNGRNETLINTPAYASDPQWVGFM 446
           +D+ GRN   +     ASDP W   +
Sbjct: 435 VDITGRNMRPVKINGAASDPDWGPLL 460


>gi|307823677|ref|ZP_07653905.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacter
           tundripaludum SV96]
 gi|307734971|gb|EFO05820.1| Tol-Pal system beta propeller repeat protein TolB [Methylobacter
           tundripaludum SV96]
          Length = 427

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 125/435 (28%), Positives = 227/435 (52%), Gaps = 11/435 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVS 70
           M     +LL+ +  F+  S +A + +       S + I+   F       +   VS VV 
Sbjct: 1   MSFFRKILLIGLVSFYVPSSYAEMTIEITEGIESALPISVVPFGMQGASGVPVDVSFVVD 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F  + + S   K +  +++ +F+DW +LG   LV G+VI E   +  V+F+L
Sbjct: 61  ADLGRSGYFKTLDKQSMPAKPSTAEAV-QFKDWQALGQNYLVIGQVI-EDHGQYNVQFQL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +DV   +Q++G +  SS A  R+ AH ISD I++ +TG+KG F+ RI +++ S       
Sbjct: 119 FDVYKGEQLMGYRMTSSAAELRRTAHHISDLIFEKLTGKKGVFSGRIAYITSSRQGKQST 178

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           + L V D DG N + +  S  + L  P +SP+ +K+AY +++ +    +Y+         
Sbjct: 179 SKLQVSDADGFNAQTI-ASSVEPLMSPAWSPDGRKIAYVSFEKKSAA-IYIQTLATG-ER 235

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            R+  F  +  AP +S +G +  +++ KD + DIY ++L + +  +LT +  I+   ++S
Sbjct: 236 ARVAEFPGINGAPSWSPDGAKLALTLSKDGSPDIYILNLVTRSLTKLTKSFAIDTEPTWS 295

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD S IVF SDR GK QLY+M S G ++KR++     +     +SP G  IA    +G  
Sbjct: 296 PDGSHIVFTSDRGGKPQLYIMSSQGGEEKRLTFSGNYNARA-SFSPDGKSIAMVHGNGSD 354

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NET 429
           + I VM        ++ +  + ++P+++P+G  ++++ +K   +   L ++ L+G+  + 
Sbjct: 355 YRIAVMDMATKSVNVITDGRSDESPSFAPNGSMILYASRKG--SAGYLSAVSLDGKMQQK 412

Query: 430 LINTPAYASDPQWVG 444
           L+   +   +P W  
Sbjct: 413 LVFDSSEIREPAWSP 427


>gi|254420878|ref|ZP_05034602.1| Tol-Pal system beta propeller repeat protein TolB [Brevundimonas
           sp. BAL3]
 gi|196187055|gb|EDX82031.1| Tol-Pal system beta propeller repeat protein TolB [Brevundimonas
           sp. BAL3]
          Length = 457

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 167/449 (37%), Positives = 247/449 (55%), Gaps = 23/449 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAF-----------VKVATNSANYSPVSIAFTKFVSIDEL 61
           M++NL L    +     +S  A            V+V  +     P+ IA   F    + 
Sbjct: 1   MRLNLLLASAAVVAMSVSSAQAQGQTAPAQAGQPVEVEIDQGVLKPLQIAIVPFTG--DH 58

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  +S VVS +L+RS  F  ++   F +      + P F  W  +GAQ ++ G V   G 
Sbjct: 59  GADISNVVSGNLRRSGFFEPLNPAGFIETGLTLANAPNFPQWTQIGAQAVLYGGVTPRGD 118

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            RL V FRL+D   + Q++  +F ++   WR+IAH ISD IYQ +TGE G F+SR++FVS
Sbjct: 119 GRLDVGFRLYDPYRQCQLVSYQFTATQEQWRRIAHKISDVIYQRMTGETGFFDSRVVFVS 178

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS---PNQQKVAYATYDDEDILR 238
           E        N L + D+DG N  YLT   D+I+  PRFS   P+  ++ Y     +D  R
Sbjct: 179 EEGTQLNRINRLTIADQDGFNPTYLTQG-DEIIMSPRFSTSQPD--EITYVALG-KDYSR 234

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +YL +    R  + +G F   +LAPRFS++G +   S+ +    DIY +DL+S    RLT
Sbjct: 235 IYLRNLTTGR-TESLGEFDGQVLAPRFSNDGNKIAFSIIRGGNTDIYVMDLRSRQLSRLT 293

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +   I+ S S+SPD SQIVF SDR G+ +LYVM+++GS Q+ IS+    +Y  P WSP G
Sbjct: 294 SDPGIDTSPSFSPDGSQIVFNSDRSGQARLYVMRADGSGQRPISRGG-GTYTAPAWSPTG 352

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +LIAFTK  G +F+ GVM  DGS ER+L      + P W+P+GR ++F+R+  G   ++L
Sbjct: 353 NLIAFTKSGGGRFSTGVMNADGSGERILSSSYFEEGPNWAPNGRYVMFARQTRG-GDTRL 411

Query: 419 YSIDLNGRNETLINTPAYASDPQWVGFMD 447
           +++DL+GR           +DP W   +D
Sbjct: 412 WTVDLSGRVVAQAGYNGRGTDPAWSPLLD 440


>gi|329904215|ref|ZP_08273698.1| tolB protein precursor [Oxalobacteraceae bacterium IMCC9480]
 gi|327548111|gb|EGF32832.1| tolB protein precursor [Oxalobacteraceae bacterium IMCC9480]
          Length = 421

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 117/435 (26%), Positives = 202/435 (46%), Gaps = 16/435 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           MK      L L+G    T+ HA ++V       + + IA   F        +VS ++  D
Sbjct: 1   MKKTFFSTLALLGLVLATAAHAQLRVDIAGVGANQIPIAIATFADESIAPAQVSAIIKAD 60

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L RS  F +I   +  +      S   + DW S GA  LV G V +    R  V ++L D
Sbjct: 61  LMRSGYFKIIDAGTMSET-----SEINYPDWKSRGADALVVGSVQRLADGRFDVRYKLLD 115

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           +     +      +     R  AH I+DDIY+ +TG +G F +RI +V++S      +  
Sbjct: 116 MIKSAPLSALSLTAPEGRTRVTAHKIADDIYEKLTGVRGAFATRIAYVTKSG----KEYR 171

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V D DG +      S + I+  P +SP+  +VAY +++++  + VY+ +  + R    
Sbjct: 172 LEVADADGEDTNVALRSNEPII-SPAWSPDGTRVAYVSFENKKPV-VYVQNL-VTRQRTV 228

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + N++    AP +S +G R  I++ +D     Y V+       RLT++  I+    +S D
Sbjct: 229 LANYKGSNSAPSWSPDGNRLAIALSRDGLTQSYIVNADGTGLRRLTSSSGIDTEPQFSAD 288

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              I F SDR G  Q+Y M  +G D +R++     +   P  SP G  +A+       F 
Sbjct: 289 GQSIYFTSDRSGGPQIYKMPVSGGDAQRVTFKGSYN-ISPRVSPDGKTLAYISRRDSAFQ 347

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLI 431
           +  M     QE+ L + +  ++P++SP+ + ++++ +  G  GS L  + ++GR  + L 
Sbjct: 348 LYAMDLANGQEQRLSDSAKDESPSFSPNSKYIMYATE-SGRRGS-LAVVSVDGRVKQRLT 405

Query: 432 NTPAYASDPQWVGFM 446
                  +P W  F+
Sbjct: 406 TQAGDIREPTWGPFI 420


>gi|332993883|gb|AEF03938.1| translocation protein TolB [Alteromonas sp. SN2]
          Length = 451

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 111/452 (24%), Positives = 200/452 (44%), Gaps = 31/452 (6%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L +  I   F   + A +++       +  P+ +   K+     L   +SEV+  DL RS
Sbjct: 6   LWIAAIAMVFSAKVFATLEIVITEGINSARPIGVVPFKWKGTGTLPSDISEVIMADLMRS 65

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F+ ++     Q     D +  +  W SLG   ++ G +  EG D+  V ++L DV   
Sbjct: 66  GKFSPVATSKMPQMPETADEV-NYSAWASLGVDTVLVGSIEPEGTDKYLVSYQLVDVLKG 124

Query: 137 KQ--------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
           +                     I  ++   SP  +R+ AH ISD +Y+ +TG +G F +R
Sbjct: 125 QLDGGQSQVLKNGELVVSNEHVIAARQSIISPRDFRQYAHRISDVVYEKLTGVRGAFLTR 184

Query: 177 ILFVSESVVSGIIK-NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           I +V         K   L + D DG N   L  S  + L  P +SP+ +K+AY ++++  
Sbjct: 185 IAYVIVRDRDAYEKPYQLVISDYDGENETRLL-SSPEPLMSPVWSPDGEKLAYVSFENRR 243

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             ++++ D    +    + +F  +  +P FS +GK+  + + KD   +IY +DL +    
Sbjct: 244 P-QIFIQDIYTSKRTT-VTDFPGINGSPSFSPDGKQLAMVLSKDGNPEIYVMDLATKNLT 301

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           R+T    I+   S+ PD S ++F S+R GK Q+Y +  N    +R++   E +      +
Sbjct: 302 RVTRNRAIDTEPSWLPDGSGLIFSSERGGKPQIYSVNLNSRKVRRVTFVGEQNLGA-TLT 360

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P G  +     +   + I     DG   ++L      ++P+ +P+G  +I+S   +G   
Sbjct: 361 PDGKQMVVVNQTNGNYHIAKQALDGGSPQVLTRTFLDESPSVAPNGSMIIYSTLHEGTQV 420

Query: 416 SKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
             L  + L+GR +  L         P W  F+
Sbjct: 421 LSL--VSLDGRFKARLPAADGQVKSPSWSPFL 450


>gi|227356659|ref|ZP_03841045.1| TolB protein [Proteus mirabilis ATCC 29906]
 gi|227163167|gb|EEI48098.1| TolB protein [Proteus mirabilis ATCC 29906]
          Length = 431

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 109/439 (24%), Positives = 198/439 (45%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           MK  L ++  L+     T  +A V++          P+ +   K+    ++   ++ V++
Sbjct: 1   MKQALNVIFGLLILCVTTLANAEVRIEITQGVNTARPIGVVPFKWEGTGQMPEDIAGVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN I  +   Q+      + +   W +LG   +V GRV      +  V ++L
Sbjct: 61  ADLRNSGKFNPIDMNRLPQQPVTASEV-QPALWTALGIDSVVVGRVQPSADGQYVVSYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            DV       +   ++  S    R  AHT SD+I++ +TG +G F +RI +V  +   G 
Sbjct: 120 VDVAGSPGAVLAQSEYKISNKWLRYAAHTASDEIFEKLTGIRGAFRTRIAYVVVTN-GGA 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N   +  S  Q L  P +SP+  K+AY T++        ++ T    
Sbjct: 179 YPYELRVSDYDGFNQDRVYRS-SQPLMSPAWSPDGAKLAYVTFESGQ--SALVVQTLATG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             ++I +F     AP FS +G +   ++ K  ++++Y +DL S    ++TN    N   +
Sbjct: 236 EVRQIASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMDLASGNMTQVTNGRSNNTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PD   +V+ SD+ G+ Q+Y +  NG   +RI+ + + +  +P  SP G  +       
Sbjct: 296 WMPDGQTLVYTSDQGGRPQIYKININGGTPERITWEGKQNQ-NPAVSPDGSFLVMVSSES 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I     + +  + L +    + P+ +P+G  +I+S  +    G+ L  +  +GR +
Sbjct: 355 GRQHIAKQDLETNAVQYLTDTFLDETPSIAPNGTMVIYSSTQG--LGTILRLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  FM
Sbjct: 413 ARLPATDGQVKSPAWSPFM 431


>gi|239947882|ref|ZP_04699635.1| Tol-Pal system beta propeller repeat protein TolB [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239922158|gb|EER22182.1| Tol-Pal system beta propeller repeat protein TolB [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 444

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 162/445 (36%), Positives = 248/445 (55%), Gaps = 20/445 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE----LGGKVSEVVSKDLQ 74
           ++  ++   F  + +A   +        P  IA  KF +       +G  V +V+S DL+
Sbjct: 4   IIYFILSLLFSFTGYALETINIEHGRADPTPIAVNKFNADSSTDNVVGHDVVKVISNDLK 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S +F  IS  SF ++ T  +  P F  W  + A +LV G V K    +L++ F LWD  
Sbjct: 64  LSGLFRPISSASFIEEKTGIEYKPLFAAWRQINASLLVNGEVKKLESGKLKISFILWDTL 123

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ+ G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + 
Sbjct: 124 LEKQLAGEILEVPETLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIK-RIA 182

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +MD DGAN +YLT  +  ++  PRF+ +  K+ Y +Y  +    VY  D +  +    +G
Sbjct: 183 LMDYDGANNKYLTNGKS-LVLTPRFARSADKIFYVSYATKRRALVYEKDLKTGKE-NVVG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  
Sbjct: 241 DFSGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPSYSPDGK 300

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEK 370
           +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK +    G+ 
Sbjct: 301 KIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYTAPSWSPRGDYIAFTKITRGDGGKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSID 422
           F IG+MK     D + ER++     +++P WSP+GR ++F+     +      +K++ ID
Sbjct: 360 FNIGIMKACPQDDENSERIITSGYLVESPCWSPNGRVIMFAKGWPSRAKAPGKNKIFVID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TP  ASDP+W G ++
Sbjct: 420 LTGHNEREIITPTDASDPEWSGVLN 444


>gi|56551061|ref|YP_161900.1| translocation protein TolB [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761363|ref|ZP_04759451.1| Tol-Pal system beta propeller repeat protein TolB [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
 gi|260753278|ref|YP_003226171.1| translocation protein TolB [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|67461903|sp|Q5NR65|TOLB_ZYMMO RecName: Full=Protein tolB; Flags: Precursor
 gi|56542635|gb|AAV88789.1| Tol-Pal system beta propeller repeat protein TolB [Zymomonas
           mobilis subsp. mobilis ZM4]
 gi|241374270|gb|EER63767.1| Tol-Pal system beta propeller repeat protein TolB [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
 gi|258552641|gb|ACV75587.1| Tol-Pal system beta propeller repeat protein TolB [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
          Length = 458

 Score =  402 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 158/421 (37%), Positives = 226/421 (53%), Gaps = 15/421 (3%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDE----------LGGKVSEVVSKDLQRSDVFNLISQD 85
           ++V        P+ IA     +             LG +V+ V+S DL+ S +F    Q 
Sbjct: 42  LRVDITGGISQPMPIAVPVMPTPSSVETLAGTTAVLGRQVASVISNDLKSSGLFTPSQQA 101

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF 145
           S         + P++  W S GAQ LV G V   G   L V   L+DV   ++++ K F 
Sbjct: 102 SLHNVSFPEVTAPQYSYWLSSGAQALVQGFVQANGDGTLTVGCYLYDVFASQEMLHKGFV 161

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
             PA WR+ AH  +D +Y  +TGE   F+SRI+++SE+         L +MD+DGAN R+
Sbjct: 162 VKPADWRRAAHKCADAVYTRLTGEGPYFDSRIVYISETGPKNHRLKRLAIMDQDGANHRF 221

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           LT  +  ++  PRF+PNQQ V Y +Y   +  R+Y+         + + N  +   APRF
Sbjct: 222 LTNGQS-MVLTPRFAPNQQTVTYLSY-VGNSPRIYVYTLGSG-HVRLVVNKPNTTFAPRF 278

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +GK  + S+      DIY V +      RLT +  I+ + S+SPD S+IVFESDR G 
Sbjct: 279 SPDGKTIVFSMSVAGNTDIYKVPVSGGQATRLTTSPGIDTAPSFSPDGSKIVFESDRSGS 338

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +Q+Y+M ++GS+Q RIS      Y  PVWSP+GDLIAFTK  G  F +GVMK DGS E++
Sbjct: 339 QQIYIMNADGSNQNRISF-GSGRYATPVWSPRGDLIAFTKL-GGGFHVGVMKTDGSGEQI 396

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
           L      + P+WSP+GR + F R       ++L+S+DL G NE  I TP   SDP W   
Sbjct: 397 LTNGWQDEGPSWSPNGRVIAFFRTARNSGHTELWSVDLTGVNERHIPTPLDGSDPSWGPL 456

Query: 446 M 446
           +
Sbjct: 457 L 457


>gi|152980804|ref|YP_001354157.1| periplasmic component of the Tol biopolymer transport system
           [Janthinobacterium sp. Marseille]
 gi|151280881|gb|ABR89291.1| periplasmic component of the Tol biopolymer transport system
           [Janthinobacterium sp. Marseille]
          Length = 423

 Score =  402 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 114/434 (26%), Positives = 200/434 (46%), Gaps = 13/434 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K        ++  F  T  HA ++V       + + +A   F        +VS ++  D
Sbjct: 2   IKTTFLRSFAVMALFITTLAHAQLRVEIAGVGANQIPVAIAAFGDETLAPQQVSAIIKAD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L RS  F +I        +   +S     DW S GA  +V G V+K    R  V +RL+D
Sbjct: 62  LLRSGFFKIIDTGG----VLTENSQLNLADWKSRGADAIVVGSVLKLADGRYEVRYRLFD 117

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                Q+      S P   R  AH ++DD+Y+ +TG KG F +RI +V++S      +  
Sbjct: 118 TVKGTQLSSLALASQPQFLRVSAHKVADDVYEKLTGIKGAFATRIAYVTKSP----KEFR 173

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L + D DG   +    S + I+  P +SP+  KVAY +++++  + VY+ D  + R    
Sbjct: 174 LEIADSDGEGTQVALRSNEPII-SPSWSPDGTKVAYVSFENKKPV-VYIQDL-VSRKRTV 230

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
             NF+    AP ++ +G R  +++ +D    +Y V+       RL+++  I+    +S D
Sbjct: 231 AANFKGSNSAPSWAPDGNRLAVALSRDGLTQVYVVNADGTGLRRLSSSNGIDTEPQFSAD 290

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              I F SDR G  Q+Y M +NG + +R++     +   P  SP G  +A+      KF 
Sbjct: 291 GQSIFFTSDRSGGPQIYKMGANGGEARRVTFSGSYN-ISPRISPDGKYLAYISRREGKFQ 349

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + ++     QE+ L +    ++P++SP+G+ L+++ +        + S+D     + L  
Sbjct: 350 LFLLDLTNGQEQRLSDTVKDESPSFSPNGKYLMYATESGRRGTLAVVSVDGQ-VKQRLTT 408

Query: 433 TPAYASDPQWVGFM 446
                 +P W  FM
Sbjct: 409 QAGDIREPTWGPFM 422


>gi|134095584|ref|YP_001100659.1| TolB periplasmic protein [Herminiimonas arsenicoxydans]
 gi|133739487|emb|CAL62538.1| Protein TolB precursor [Herminiimonas arsenicoxydans]
          Length = 423

 Score =  402 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 117/434 (26%), Positives = 202/434 (46%), Gaps = 13/434 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
            K +      ++  F  +  HA ++V       + + IA   F        +VS ++  D
Sbjct: 2   TKTSFLRSFAILALFVTSLAHAQLRVEIAGVGANQIPIAIAAFGDESIAPHQVSAIIKAD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L RS  F +I        +   +S     DW S GA  LV G V +    R  V++RL+D
Sbjct: 62  LLRSGYFKVIDTG----TVLTENSQVNLADWKSRGADALVVGSVSRLPDGRFDVKYRLFD 117

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
              + Q+      + P   R  AH I+DDIY+ +TG +G F +RI +V+++      +  
Sbjct: 118 TIKQAQLSSLALANQPQFIRVSAHKIADDIYEKLTGIRGAFATRIAYVTKAG----KEFR 173

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L + D DG   +    S + I+  P +SP+  KVAY +++++  + VY+ D  + R    
Sbjct: 174 LEIADSDGEGTQVALRSNEPII-SPAWSPDGTKVAYVSFENKKPV-VYIQDL-VSRKRTV 230

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
             NF+    AP +S +G R  +++ +D    +Y V+       RL+N+  I+    YS D
Sbjct: 231 AANFKGSNSAPSWSPDGSRLAVALSRDGLTQVYVVNADGTNPRRLSNSNGIDTEPQYSAD 290

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              I F SDR G  Q+Y M SNG + +R++     +   P  SP G  +A+      KF 
Sbjct: 291 GQSIYFTSDRSGGPQIYKMGSNGGEARRVTFAGSYN-ISPRISPDGKFLAYISRREGKFQ 349

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + ++  +  QE+ L +    ++P++SP+G+ L+++ +        + S+D     + L  
Sbjct: 350 LFILDLNNGQEQRLSDTVKDESPSFSPNGKYLMYATESGRRGTLAVVSVDGQ-VKQRLTT 408

Query: 433 TPAYASDPQWVGFM 446
                 +P W  FM
Sbjct: 409 QSGDIREPTWGPFM 422


>gi|220935397|ref|YP_002514296.1| hypothetical protein Tgr7_2229 [Thioalkalivibrio sp. HL-EbGR7]
 gi|254764843|sp|B8GUI9|TOLB_THISH RecName: Full=Protein tolB; Flags: Precursor
 gi|219996707|gb|ACL73309.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 435

 Score =  402 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 120/420 (28%), Positives = 215/420 (51%), Gaps = 10/420 (2%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDE-LGGKVSEVVSKDLQRSDVFNLISQDSFK 88
             A +++          P++I    +          +  ++  +L RS  F+ + Q    
Sbjct: 22  AQAALEIRITQGVEGAMPIAIVPFGWEGPGARPPEDIGAIIQANLHRSGQFSPMEQGRMP 81

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
           Q+ T    +  FQ W   G   +V GR++  G DR  V+F+L+D    +Q+ G    +S 
Sbjct: 82  QRPTRGQDV-NFQVWRGAGVDYVVIGRLVPAGADRFNVQFQLFDTVRGRQVTGYSIPASS 140

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           +  R+ AH  SD IYQ ITG +G FN+R+ +VS +   G  + +L V D DG N R +  
Sbjct: 141 SQLRRAAHMASDIIYQQITGVRGAFNTRVAYVSVTREGGEQRFALQVADADGHNPRTIFR 200

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           SR  I   P +SP+ +++AY ++++ +   +Y+ D       +RI +F+ +  AP +S +
Sbjct: 201 SRQPI-LSPVWSPDGRRLAYVSFENRNS-EIYVQDID-GAQRERIASFQGINSAPAWSPD 257

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+R  +++ +D   DIY ++L   +  R+TN+  I+    ++PD   ++F SDR G  Q+
Sbjct: 258 GRRMALTLSRDGQPDIYVMNLADRSLLRVTNSRSIDTEPEWTPDGRNLLFTSDRAGNPQI 317

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y    +G   +R++ D   +  +P  SP G L+A     G +F I V+ +   Q RLL +
Sbjct: 318 YEQSLSGGQPRRLTFDGRYN-GNPTLSPDGRLVAMVNGDGGRFRIAVLDRQTRQFRLLTD 376

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFMD 447
               +AP+++P+G  +I++    G  G +L ++  +GR  ++L+       +P W  F+D
Sbjct: 377 GRLDEAPSFAPNGSMIIYATAGRGGQG-ELAAVSADGRVRQSLVLQEGEVREPAWSPFLD 435


>gi|226705864|sp|B4RTH4|TOLB_ALTMD RecName: Full=Protein tolB; Flags: Precursor
          Length = 451

 Score =  401 bits (1031), Expect = e-109,   Method: Composition-based stats.
 Identities = 111/455 (24%), Positives = 204/455 (44%), Gaps = 31/455 (6%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
            L L + LI   F  ++ A +++       +  P+ +   K+     + G +S+VV  DL
Sbjct: 3   KLGLWIALITMAFSANVSASLEIVITEGVDSARPIGVVPFKWKGQGSMPGDISKVVMADL 62

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  FN +S D   Q     + +  +  W +LG   ++ G +  +G DR  V + L DV
Sbjct: 63  MRSGKFNPVSVDKMPQFPETAEQVS-YTAWATLGVDTVLVGSIEPQGGDRFLVSYELIDV 121

Query: 134 KDRKQ--------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
              +                     +  ++   +   +R+ AH ISD +Y+ +TG +G F
Sbjct: 122 LKGQVDNGQAKVLKNGSLVSSNNHVLAARQAVINGRDFRQYAHRISDIVYEKLTGVRGAF 181

Query: 174 NSRILFVSESVVSGIIK-NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            ++I +V       + K   L + D DG N   L  S  + L  P +SP+ +K+AY +++
Sbjct: 182 LTKIAYVIVRDRDTVEKPYQLVIADYDGENETRLL-SSPEPLMSPVWSPDGEKLAYVSFE 240

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           +    ++++ D        RI +F  +  +P FS +GK+  + + KD   ++Y +DL + 
Sbjct: 241 NRRP-QIFIQDIYTSE-RTRITDFPGINSSPTFSPDGKQLAMVLSKDGNPELYVMDLATK 298

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              R+T    I+   ++ PD S ++F S+R GK Q+Y +  N    +R++   E +    
Sbjct: 299 NLRRITRNRAIDTEPAWLPDGSGLIFSSERGGKPQIYSVNLNSGKVRRVTFVGEQNLGG- 357

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             SP G  +     +   + I     DG   ++L      ++P+ +P+G  +I+S   +G
Sbjct: 358 TLSPDGKQMIMVNQTNGNYHIAKQSLDGGSPQVLTRTYLDESPSVAPNGSMIIYSTLHEG 417

Query: 413 DTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
                L  + L+GR +  L         P W  F+
Sbjct: 418 TQVLSL--VSLDGRFKARLPAANGQVKSPSWSPFL 450


>gi|302381977|ref|YP_003817800.1| Tol-Pal system beta propeller repeat protein TolB [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302192605|gb|ADL00177.1| Tol-Pal system beta propeller repeat protein TolB [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 466

 Score =  401 bits (1031), Expect = e-109,   Method: Composition-based stats.
 Identities = 164/457 (35%), Positives = 244/457 (53%), Gaps = 29/457 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAF----------------------VKVATNSANYSPVSI 50
           M+ NL L  V   G   TS+ A                       ++V  +     P  I
Sbjct: 1   MRPNLLLGTVAALGILATSLQAQTSGLNGPSRQQTQAQPAQTGEPIEVEIDQGVLRPFQI 60

Query: 51  AFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQV 110
           A   F   +  G  ++EV+S DL+RS  F  I+  SF +      + P F  W  +GAQ 
Sbjct: 61  AVAPFSGQN--GASLTEVLSGDLRRSGFFEPINPGSFIETGLTLANAPNFPQWTQIGAQA 118

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           ++ G V      R    FRL+D   + Q++   F ++P  WR+IAH I+D +Y  +TGE 
Sbjct: 119 VLYGSVTPRPDGRNDFGFRLYDPYRQCQLVSYNFTATPEQWRRIAHKIADVVYARMTGES 178

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F++RI++V+ES       + L ++D+DG N  +LT   + I+  PRFS N  ++ Y  
Sbjct: 179 GVFDTRIIYVAESGTELNRLSRLAIVDQDGYNPVFLTDGSE-IILTPRFSSNPNEITYMA 237

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              ED  R+YL + +  R  + +G F    LAPR+S +G +   S+ +    D+Y ++L+
Sbjct: 238 LG-EDYSRIYLYNLQTGR-RESLGEFDGQALAPRYSPDGTKVAFSIIRGGNTDVYVMNLR 295

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +    RLT+   I+ S S+SPD+S+IVF SDR G  +LYVM ++GS+Q+ IS+    SY 
Sbjct: 296 TRQLSRLTSDPGIDTSPSFSPDASRIVFNSDRTGTPRLYVMNADGSNQRPISRGG-GSYT 354

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            P WSP+GDLIAFTK  G +F IGVM  DGS ER+L      + P+W+P+GR L+FSR+ 
Sbjct: 355 APAWSPRGDLIAFTKSGGGQFGIGVMATDGSGERMLSRSYFEEGPSWAPNGRYLMFSRQT 414

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
            G   + L+ +DL+GR           SDP W   +D
Sbjct: 415 RG-GNTNLWMVDLSGRVIAQSGYQGRGSDPAWSPLLD 450


>gi|145297814|ref|YP_001140655.1| translocation protein TolB [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|166988074|sp|A4SJ35|TOLB_AERS4 RecName: Full=Protein tolB; Flags: Precursor
 gi|142850586|gb|ABO88907.1| Periplasmic component of the Tol biopolymer transport system
           [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 441

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 113/449 (25%), Positives = 206/449 (45%), Gaps = 23/449 (5%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSK 71
            I      ++       S  A + +       +  P++IA  K+    +L   ++EVVS 
Sbjct: 1   MIRKVFFALVGCLLLSQSAQAALDIVITGGIDSARPIAIAPFKWEGNGQLPQDIAEVVSN 60

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  F  +++    Q  ++   I  F  W S G + +V G +   G    ++ F L 
Sbjct: 61  DLMRSGKFKPLARGQMPQTPSSSGEI-NFAPWASQGVEAVVVGSIAAVGDGTYKINFELV 119

Query: 132 DVKDRKQ------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           DV   +             +  +      A  R+ AH ISD +Y+ +TGE+G F +RI +
Sbjct: 120 DVLKGQLAKTQGGESNGYILDSRMATIPGAQMRQFAHRISDIVYERLTGERGAFLTRIAY 179

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           VS           L + D DG N + L  SR+  L  P +SP+  K+AY +++++    +
Sbjct: 180 VSIE-QGAQFPYQLRISDYDGYNEKTLLRSREP-LMSPAWSPDGSKLAYVSFENQKS-EI 236

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y+ D   ++    I +FR +  AP++S +G+R  I + KD   DIY +D+ S    R+TN
Sbjct: 237 YVQDI-YNQQRSLISSFRGINGAPKWSPDGRRLAIVLSKDGQPDIYVIDVASKQLTRVTN 295

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T  I+   ++ PD   ++F S+R GK Q+Y +       +R++ + E++    V +P G 
Sbjct: 296 TRVIDTEPAWMPDGQTLIFTSERGGKPQIYSVNLATGVTRRMTWEGESNQGASV-TPDGK 354

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +        ++ I     +     +L + +  ++P+ +P+G  +I++    G     L 
Sbjct: 355 SMVMVTRVQGQYRIARQDMESGAMLVLTQSALDESPSVAPNGSMIIYATIYQGRKSLAL- 413

Query: 420 SIDLNGRNETLINT-PAYASDPQWVGFMD 447
            +  +GR + ++ T       P W  F++
Sbjct: 414 -VSTDGRFKAVLPTSSGEIRAPAWSPFLN 441


>gi|260768866|ref|ZP_05877800.1| TolB protein precursor [Vibrio furnissii CIP 102972]
 gi|260616896|gb|EEX42081.1| TolB protein precursor [Vibrio furnissii CIP 102972]
          Length = 450

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 108/458 (23%), Positives = 200/458 (43%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L L  +L+        +A +++       +  P++I   K+    +L   VS V++
Sbjct: 1   MLKRLMLGCLLVVSSSVQFANAALELVITDGINSARPIAIVPFKWEGKTKLPQDVSGVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ I      Q   N   + +F  W S+G   L+TG + +       + ++L
Sbjct: 61  SDLQRSGKFSPIPTSKMPQTPYNEADV-KFDAWTSIGVDALLTGSITQNADGNYVINYQL 119

Query: 131 WDVKDRKQ---------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            DV   +                      +  K         R+ AH I+D +Y+ +TGE
Sbjct: 120 VDVVRGQLTQGQSRALSSDGQLVLSKDHVLFNKVATVPAKRMREYAHRIADLVYEELTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V  +         L V D DG N R +  S+ Q L  P +SP+ +K+AY 
Sbjct: 180 RGAFLTRIAYVVVN-DKDAYPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGKKLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +Y+M+       +++ ++     APRFS +GK   + + K  ++ +Y++DL
Sbjct: 238 SFQNGQA-EIYIMNIYTGE-REKVTSYPRHNGAPRFSPDGKTLALVLSKTGSLQVYTLDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            S    ++T+    N    ++PD   ++F SDR GK Q+Y +       KR++     + 
Sbjct: 296 TSRKLTQITSGRSNNTEPFWNPDGKSLIFTSDRGGKPQIYQVNLTDGATKRLTWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S  
Sbjct: 356 GGQ-ITPDGRFLVMVNRSNSGFNLAKQDLETGSVQILTKTLLDESPSIAPNGGMVIYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +    + L  + ++GR +  L  T      P W  F+
Sbjct: 415 YN--KANVLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|152996216|ref|YP_001341051.1| translocation protein TolB [Marinomonas sp. MWYL1]
 gi|189035984|sp|A6VXD7|TOLB_MARMS RecName: Full=Protein tolB; Flags: Precursor
 gi|150837140|gb|ABR71116.1| Tol-Pal system beta propeller repeat TolB [Marinomonas sp. MWYL1]
          Length = 432

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 104/437 (23%), Positives = 205/437 (46%), Gaps = 11/437 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVS 70
           M    CL ++     F +S  A + +   S     + IA   F    +D L   ++++V 
Sbjct: 1   MMFKKCLSVLFTCLIFISSARAQLVIEITSGADQLLPIAVVPFGYEGVDALPEDIAQIVE 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS +F  I + +     +    +  ++DW  L +  +V G + K   ++ R+ F L
Sbjct: 61  ADLARSGLFQPIPRSNMLSMPSKEADV-FYRDWRLLKSDYVVIGAIKKLPNNQYRIGFEL 119

Query: 131 WDVKDRKQIIGKKFF-SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            +V  +K +        S  ++R  AH ISD +Y+ +TG +G F++RIL+V+        
Sbjct: 120 LNVLSQKPVQKHSSIDVSARNFRDAAHYISDKVYELLTGTRGAFSTRILYVTAEGDKKAP 179

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L V D DG   + +  S++ I   P +S + +K+AY  + +     +++ +    + 
Sbjct: 180 LFKLQVADADGHRPQVVVESKEPI-LSPSWSMDGRKIAYVMFRNRRP-NIFIQELATGK- 236

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I  FR +  AP +S +GK+  + + KD   +IY++D+ +   ER+TN   I+   S+
Sbjct: 237 RQQIAQFRGLNGAPAWSPDGKKLALVLSKDNNPEIYTLDIATQKLERMTNHYAIDTEPSW 296

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PD   IVF SDR G  Q+Y +  N    +R++ + + +      +P G  +   + +  
Sbjct: 297 EPDGKGIVFTSDRGGNPQIYRLDVNSKRVERVTFEGDLNTRA-RMTPDGRYLVTVQKNDG 355

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE- 428
            + I +      + ++L E    ++P+ +P+G  ++++    G     L  + ++G  + 
Sbjct: 356 NYHIALQDMKTGRVQILTETYLDESPSIAPNGSMVMYATTYQGKGI--LAVVSVDGLVKY 413

Query: 429 TLINTPAYASDPQWVGF 445
            L +      +P W  +
Sbjct: 414 RLPSADGDVREPSWSPY 430


>gi|148555048|ref|YP_001262630.1| translocation protein TolB [Sphingomonas wittichii RW1]
 gi|166229992|sp|A5V876|TOLB_SPHWW RecName: Full=Protein tolB; Flags: Precursor
 gi|148500238|gb|ABQ68492.1| Tol-Pal system beta propeller repeat, TolB [Sphingomonas wittichii
           RW1]
          Length = 439

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 155/420 (36%), Positives = 225/420 (53%), Gaps = 15/420 (3%)

Query: 37  KVATNSANYSPVSIAFT----------KFVSIDELGGKVSEVVSKDLQRSDVFNLISQDS 86
           +V        P+ IA                   LG +V++VV+ DL+ S +F+ + + +
Sbjct: 24  EVDITGGIAQPMPIAIPGMPTPAVANTPAGDTAALGQRVADVVTNDLKNSGLFSPLPKSA 83

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS 146
            +       + P +  W   GAQ L+ G V   G   L V   L+DV  R ++  + F  
Sbjct: 84  LQTVTHPQVTAPDYMFWTQSGAQALIQGFVQANGDGSLTVGCYLYDVLARTELTRQGFVV 143

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
            PA WR+ AH  +D +Y  +TGE   F+SR+++VSE+         L +MD+DGAN R+L
Sbjct: 144 QPAQWRRAAHKCADLVYTRLTGEGPYFDSRVVYVSETGPKTNRIKRLAIMDQDGANHRFL 203

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T  +  I+  PRF+PNQQ + Y +Y +    RVY+ D       + + +  +M  APRFS
Sbjct: 204 TNGQ-TIVLTPRFAPNQQTITYMSYTNNRA-RVYVYDIGSGSQ-RLVVDQPNMTFAPRFS 260

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+  + S+      DIY V       +RLT +  I+  ASYSPD S+IVFESDR G +
Sbjct: 261 PDGRTIVFSMAVGGNTDIYRVSAGGGTPQRLTTSPGIDTGASYSPDGSKIVFESDRSGTQ 320

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           QLYVM ++GS+Q RIS      Y    WSP+GDLIAFTK  G  F +G+M  DGS E++L
Sbjct: 321 QLYVMNADGSNQNRISF-GSGRYGSAAWSPRGDLIAFTKI-GGGFNVGIMNIDGSGEKIL 378

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                 + P+WSP+GR ++F R   G   + L+S+DL G NE  + TP   SDP W   +
Sbjct: 379 TNGWQDEGPSWSPNGRVIMFFRTAQGSGKADLWSVDLTGVNERPVPTPLDGSDPAWGPLL 438


>gi|294678712|ref|YP_003579327.1| TolB protein [Rhodobacter capsulatus SB 1003]
 gi|294477532|gb|ADE86920.1| TolB protein [Rhodobacter capsulatus SB 1003]
          Length = 437

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 156/436 (35%), Positives = 246/436 (56%), Gaps = 8/436 (1%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVSKD 72
           I      +++      +    +++  +     P+  A   FV      L  +++ V++ D
Sbjct: 5   ILAATAALMLTTGMAAAQQGPLRIELDEGVIEPLPYALPTFVDEGAGSLASQITRVIADD 64

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L  + +F  I + +  Q+  + D+   + DW ++ AQ L+ G V   G  ++ V+FRL D
Sbjct: 65  LSGTGLFREIPEAAHIQRFGSFDTPVSYADWQAINAQALINGSVGMSG-GKVVVKFRLHD 123

Query: 133 VKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           V    Q+  G++  +SP SWR++AH ++D IY  ITGE G F+SR+++VSE+      + 
Sbjct: 124 VYGNTQLGDGQQLAASPQSWRRLAHKVADVIYARITGESGYFDSRVVYVSETGPKDQRQK 183

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +MD DG N+ YLT S   I+  PRFSP   ++ Y T++     R+ +M         
Sbjct: 184 RLAIMDYDGENVNYLTDS-STIVLAPRFSPQGDRILYTTFETG-FPRIKMMSVGNAAGKL 241

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                 +M  +PRFS +G   + S++++   D+Y + +   + ERLTN+  I  + SYSP
Sbjct: 242 LPEVPGTMTFSPRFSPDGGSIVYSLEQNGNTDLYRMSVSGGSVERLTNSPAIETAPSYSP 301

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D SQIVFESDR G +Q+YVM ++G +  RIS + +  Y  PVWSP+GDLIAFTK SG +F
Sbjct: 302 DGSQIVFESDRSGTQQIYVMSASGGEPVRIS-NGDGRYGTPVWSPRGDLIAFTKQSGGRF 360

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETL 430
            IGVM+ DGS+ER L      + PTW+P+GR L+F+R+  G   G+K++++D+ GRN   
Sbjct: 361 FIGVMRTDGSEERDLTASYLDEGPTWAPNGRVLMFTRESPGAAGGAKMFTVDITGRNLKA 420

Query: 431 INTPAYASDPQWVGFM 446
           +     ASDP W   +
Sbjct: 421 VAGVGGASDPTWGPLL 436


>gi|226330928|ref|ZP_03806446.1| hypothetical protein PROPEN_04851 [Proteus penneri ATCC 35198]
 gi|225201723|gb|EEG84077.1| hypothetical protein PROPEN_04851 [Proteus penneri ATCC 35198]
          Length = 432

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 111/446 (24%), Positives = 202/446 (45%), Gaps = 19/446 (4%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGG 63
            + + LN+   L +L V       T  +A V++          P+ +   K+    ++  
Sbjct: 1   MMKQALNVIFGLLILCV------TTLANAEVRIEITQGVNTARPIGVVPFKWEGTGQMPE 54

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
            ++ V++ DL+ S  FN I      Q+      + +   W +LG   +V GRV      +
Sbjct: 55  DIAGVIAADLRNSGKFNPIDVSRIPQQPVTASEV-QPALWTALGIDSVVVGRVQPSADGQ 113

Query: 124 LRVEFRLWDVKDR-KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             V ++L DV      ++ +  F  P+ W R  AHT SD++++ +TG +G F +RI +V 
Sbjct: 114 YLVSYQLVDVAGSPGAVLSQSEFKVPSKWLRYSAHTASDEVFEKLTGIRGAFRTRIAYVV 173

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +   G     L V D DG N   +  S  Q L  P +SP+  K+AY T++        +
Sbjct: 174 VTN-GGAYPYELRVSDYDGFNQDRVYRS-SQPLMSPAWSPDGAKLAYVTFESGQ--SALV 229

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           + T      ++I +F     AP FS +G +   ++ K  ++++Y +DL S    ++TN  
Sbjct: 230 VQTLATGEIRQIASFPRHNGAPSFSPDGSKLAFALSKSGSLNLYVMDLASGNMTQVTNGR 289

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             N   ++ PD   +V+ SD+ G+ Q+Y +  NG   +RI+ + + +  +P  SP G  +
Sbjct: 290 SNNTEPNWMPDGQTLVYTSDQGGRPQIYKVNINGGTPERITWEGKQNQ-NPAVSPDGSFL 348

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   +  I     + +  + L +    + P+ +P+G  +I+S  +   T  +L  +
Sbjct: 349 VMVSSESGRQHIAKQDLETNSVQYLTDTFLDETPSIAPNGTMVIYSSTQGLGTILQL--V 406

Query: 422 DLNGRNE-TLINTPAYASDPQWVGFM 446
             +GR +  L  T      P W  FM
Sbjct: 407 STDGRFKARLPATDGQVKSPAWSPFM 432


>gi|83859800|ref|ZP_00953320.1| translocation protein TolB precursor [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852159|gb|EAP90013.1| translocation protein TolB precursor [Oceanicaulis alexandrii
           HTCC2633]
          Length = 448

 Score =  400 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 162/448 (36%), Positives = 241/448 (53%), Gaps = 16/448 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSEV 68
           ++     +L LI           + V        P  IA   F+  D    E+G  +S V
Sbjct: 4   LRYLFAPILALIVMAGSAFAQTPLVVDVTEGTLDPTPIAIPDFLGADNREAEIGADISRV 63

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +S +LQ S +F  +  D+F + IT+ +  PRF DW  + A  L+ G V  +  DR+ V F
Sbjct: 64  ISNNLQTSGLFAPVDPDAFIEDITDINLRPRFGDWRVINASALLVGEVTIDENDRMLVAF 123

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE-SVVSG 187
           RLWD    +Q+ G +F +SP +WR+IAH +SD +Y+ +TGE G F++RI++VSE    +G
Sbjct: 124 RLWDANTEQQLQGLQFVTSPDNWRRIAHKVSDAVYERLTGESGYFDTRIVYVSEGDGPNG 183

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L VMD+DGAN  +LT  R  +   P +SP+ Q++ Y ++ D      YL D    
Sbjct: 184 EPIRRLAVMDQDGANPSFLTD-RSYMALLPNYSPSAQQITYVSFRDGRATS-YLYDLETG 241

Query: 248 RAPKRIGNFR-----SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           R      +          L+ RF  NG+  ++S ++    D++  DL+S    +LT    
Sbjct: 242 RQEALFDSGPSLASEGQSLSARFHPNGRELVVSAERHSGHDLFKFDLRSRTLRQLTTHPA 301

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            ++  SY+PD  Q+VF S R G+ QLYVM ++G+D +RI+   E  Y  PVWSP+GDLIA
Sbjct: 302 DDVEPSYAPDGEQVVFSSSRGGQSQLYVMNADGTDPQRITF-GEGRYTTPVWSPRGDLIA 360

Query: 363 FTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSR--KKDGDTGSKLY 419
           FTK    +F +GV+  DG  +ER+L E   +  P WSP+GR L+F+R  +    T   ++
Sbjct: 361 FTKQRSGQFMLGVVAADGSGEERILYEGYFVDTPAWSPNGRVLLFTRGDRTREGTTYSIW 420

Query: 420 SIDLNGRNETLINTPAYASDPQWVGFMD 447
           SIDL G N   + T   ASDP W   +D
Sbjct: 421 SIDLAGFNLRRLPTQGEASDPAWSPLID 448


>gi|269139918|ref|YP_003296619.1| translocation protein [Edwardsiella tarda EIB202]
 gi|267985579|gb|ACY85408.1| translocation protein [Edwardsiella tarda EIB202]
 gi|304559753|gb|ADM42417.1| tolB protein precursor [Edwardsiella tarda FL6-60]
          Length = 430

 Score =  399 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/432 (23%), Positives = 198/432 (45%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           L+V +   + + +HA V++       +  P+ +   K++        +  +++ DL+ S 
Sbjct: 7   LMVGLLVLWASVLHAEVRIVITQGVDSARPIGVVPFKWMGPGAAPENIGGIIAADLRNSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-- 135
            FN I      Q+ +    +     W +LG   +V G+V         V ++L D     
Sbjct: 67  KFNPIDASRMPQQPSTAAEV-TPAAWTALGIDAVVVGQVQPGADGSYLVSYQLVDTSGNP 125

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              +   ++  +    R  AHT SD++++ +TG KG F +RI +V ++   G     L V
Sbjct: 126 GSVLAQNQYKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRV 184

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N +++     + L  P +SP+  K+AY T++        ++ T  + A +++ +
Sbjct: 185 ADYDGYN-QFVVHRSAEPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLSNGAIRQVAS 241

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F     +P FS +G +   ++ K  ++++Y +DL S A  ++T+    N   ++ PDS  
Sbjct: 242 FPRHNGSPAFSPDGSKLAFALSKTGSLNLYVMDLASGAIRQVTDGRSNNTEPTWFPDSQN 301

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + F SD+ G+ Q+Y M  NG   +R++ +   +    V SP G  +     +     I  
Sbjct: 302 LAFTSDQAGRPQIYKMNINGGAAQRLTWEGSQNQDAEV-SPDGKFLVMVSSNAGAQHIAK 360

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTP 434
           +    +  ++L +    + P+ +P+G  +I+S  +    GS L  + ++GR +  L  T 
Sbjct: 361 LDLGTNATQVLTDTFLDETPSIAPNGTMVIYSSTQG--LGSVLQLVSIDGRFKARLPATD 418

Query: 435 AYASDPQWVGFM 446
                P W  ++
Sbjct: 419 GQVKFPAWSPYL 430


>gi|262276103|ref|ZP_06053912.1| TolB protein precursor [Grimontia hollisae CIP 101886]
 gi|262219911|gb|EEY71227.1| TolB protein precursor [Grimontia hollisae CIP 101886]
          Length = 450

 Score =  399 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 114/457 (24%), Positives = 198/457 (43%), Gaps = 32/457 (7%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M  +L    V +         A +K+       +  P++I   K+    +L   VS VV+
Sbjct: 1   MLKHLLFGAVAMMLAVIQPAQAELKLVITEGINSARPIAIVPFKWEGEGKLPTDVSAVVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ I  D   Q   N D+   F DW ++G   LVTG V      + ++E++L
Sbjct: 61  SDLQRSGKFSPIPTDKMPQTPYN-DTEVDFNDWTAIGVDALVTGTVKPAAGGKYQIEYQL 119

Query: 131 WDVKDRKQIIGK---------------------KFFSSPASWRKIAHTISDDIYQSITGE 169
            D+   +   G+                     +      + RK+AH I+D IY+ +TGE
Sbjct: 120 IDIVRGQLTGGQSKGLSASGELVITKDHLLIHSRHTVGQEALRKLAHLIADRIYEKLTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           KG F +RI +V     S      L + D DG N   +  S  Q L  P +SP+ +++AY 
Sbjct: 180 KGAFLTRIAYVVIDEKSDH-PYQLRISDYDGYNEHRVL-SSTQPLMSPSWSPDGKQLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++++    +++L +       + I +F     +PRFS +G +  + + K  ++ IY +DL
Sbjct: 238 SFENGQA-QIFLTNIYTGE-RQMISSFPRHNGSPRFSPDGSKLAMVLSKTGSLQIYVMDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +   E++T     N    ++PD   ++F SDR GK Q+Y +  +     RI+     + 
Sbjct: 296 NTRQLEQITKGRANNTEPFWAPDGQSLIFTSDRGGKPQIYRVNLSDGSTNRITWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   + I           +L +    ++P+ +P+G  +I+S  
Sbjct: 356 GGQ-LTPDGRYLVMVHRSDSGYNIAKQDLQTGAVEILTKTMLDESPSLAPNGSMVIYSSV 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGF 445
                 + L  + ++GR +  L  T      P W  F
Sbjct: 415 YG--RSNVLSMVSIDGRFKARLPATNGRVRAPAWSPF 449


>gi|297539676|ref|YP_003675445.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Methylotenera sp. 301]
 gi|297259023|gb|ADI30868.1| Tol-Pal system beta propeller repeat protein TolB [Methylotenera
           sp. 301]
          Length = 439

 Score =  399 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 116/442 (26%), Positives = 217/442 (49%), Gaps = 15/442 (3%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKV 65
           F+  + +  +NL +       F P+  +A +++  +      V IA   F         +
Sbjct: 11  FLRLQFSTILNLAIF--SASLFIPSLANAALEIEISGGGAQQVPIAIVPFEQSGNSADNI 68

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
           S +++ DL+RS +F ++       K T+   I ++ +W +L AQ +  G V     +RL+
Sbjct: 69  SSIIAADLKRSGLFRVLETGGVVNKPTDITQI-KYSEWANLQAQAMAVGVVETLPNNRLK 127

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           V F+L DV  + Q+ G ++  +P   R  AH I+D IYQ +TGE G F SRI +++    
Sbjct: 128 VTFQLADVLKQSQLTGMQYTIAPNQLRTTAHKIADVIYQKLTGESGIFASRIAYIT---- 183

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
               +  L V D DGAN   +  S++ I+  P +SP   K+AY +++ +  + +Y+    
Sbjct: 184 KANDRYMLKVADADGANPLTMVSSKEPII-SPAWSPEGNKIAYVSFEKKKPI-IYVQTL- 240

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +  F+    AP +S +G +  I +       +Y+++   +   R+T    I+ 
Sbjct: 241 -SGQRTVLAGFKGNNSAPAWSPDGSKLAIVLTYGANSQVYTINADGSGLSRITKGNAIDT 299

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++S D+  I F SDR GK Q+Y + +NG D +R++ +   +   P +SP G  +A  +
Sbjct: 300 EPTWSSDAKWIYFTSDRGGKPQIYKVSANGGDPQRVTFEGAYNV-SPRFSPDGKSLAMIR 358

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             G KF + +      Q +LL E S  ++P+++P+GR ++++ +  G     L ++  +G
Sbjct: 359 NDGGKFRVALQDLTTGQVQLLSEGSQDESPSFAPNGRVILYATRSSGHGA--LAAVSADG 416

Query: 426 RNETLIN-TPAYASDPQWVGFM 446
           R +  +N +     +P W   +
Sbjct: 417 RVKQRLNESGGDIREPAWGPLI 438


>gi|330828307|ref|YP_004391259.1| protein tolB [Aeromonas veronii B565]
 gi|328803443|gb|AEB48642.1| Protein tolB [Aeromonas veronii B565]
          Length = 441

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 109/449 (24%), Positives = 206/449 (45%), Gaps = 23/449 (5%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSK 71
            I      ++       S  A + +       +  P+++A  K+    +L   ++EVVS 
Sbjct: 1   MIRKVFFALVGCLLLGQSAQAALDIVITGGIDSARPIAVAPFKWEGNGQLPQDIAEVVSN 60

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  F  +++    Q  ++   I  F  W S G + +V G +   G    +V F L 
Sbjct: 61  DLMRSGKFKPLARGQMPQTPSSSSEI-NFAPWASQGVEAVVVGSISAVGDGTYKVNFELV 119

Query: 132 DVKDRKQ------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           DV   +             +  +      A  R+ AH ISD +Y+ +TGE+G F +R+ +
Sbjct: 120 DVLKGQLAKAQGGESNGYILDSRMATIPGAQMRQFAHRISDIVYERLTGERGAFLTRLAY 179

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           VS    +      L + D DG N + L  SR+  L  P +SP+  K+AY +++++    +
Sbjct: 180 VSVQQGT-QFPYQLRISDYDGYNEKTLLRSREP-LMSPAWSPDGSKLAYVSFENQKS-EI 236

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y+ D    +    I +FR +  AP +S +G+R  I + KD + ++Y VD+ S    R+T 
Sbjct: 237 YVQDIYT-QQRSLITSFRGINGAPEWSPDGRRLAIVLSKDGSPNLYVVDVASKQLTRVTT 295

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +  I+   S+ PD   ++F S+R GK Q+Y +       +R++ + E++      +P G 
Sbjct: 296 SRVIDTEPSWMPDGQNLLFTSERGGKPQIYSVNLATGMTRRMTWEGESNQGA-SITPDGK 354

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           ++        ++ I     + +   +L + +  ++P+ +P+G  +I++    G     L 
Sbjct: 355 IMVMVTRVQGQYRIARQDMENNALLVLTQSALDESPSVAPNGSMIIYATIYQGRKSLAL- 413

Query: 420 SIDLNGRNETLINT-PAYASDPQWVGFMD 447
            +  +GR + ++ T       P W  F++
Sbjct: 414 -VSTDGRFKAVLPTSSGEIRAPAWSPFLN 441


>gi|15641838|ref|NP_231470.1| translocation protein TolB [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121727646|ref|ZP_01680749.1| tolB protein [Vibrio cholerae V52]
 gi|147674437|ref|YP_001217372.1| translocation protein TolB [Vibrio cholerae O395]
 gi|153214273|ref|ZP_01949290.1| tolB protein [Vibrio cholerae 1587]
 gi|153800415|ref|ZP_01955001.1| tolB protein [Vibrio cholerae MZO-3]
 gi|153828587|ref|ZP_01981254.1| tolB protein [Vibrio cholerae 623-39]
 gi|227081965|ref|YP_002810516.1| tolB protein [Vibrio cholerae M66-2]
 gi|229508067|ref|ZP_04397572.1| TolB protein precursor [Vibrio cholerae BX 330286]
 gi|229511694|ref|ZP_04401173.1| TolB protein precursor [Vibrio cholerae B33]
 gi|229515216|ref|ZP_04404676.1| TolB protein precursor [Vibrio cholerae TMA 21]
 gi|229518833|ref|ZP_04408276.1| TolB protein precursor [Vibrio cholerae RC9]
 gi|229523854|ref|ZP_04413259.1| TolB protein precursor [Vibrio cholerae bv. albensis VL426]
 gi|229529141|ref|ZP_04418531.1| TolB protein precursor [Vibrio cholerae 12129(1)]
 gi|229607628|ref|YP_002878276.1| translocation protein TolB [Vibrio cholerae MJ-1236]
 gi|254848922|ref|ZP_05238272.1| tolB protein [Vibrio cholerae MO10]
 gi|255745402|ref|ZP_05419351.1| TolB protein precursor [Vibrio cholera CIRS 101]
 gi|297579355|ref|ZP_06941283.1| tolB protein [Vibrio cholerae RC385]
 gi|298498125|ref|ZP_07007932.1| tol-Pal system beta propeller repeat protein TolB [Vibrio cholerae
           MAK 757]
 gi|32699719|sp|Q9KR11|TOLB_VIBCH RecName: Full=Protein tolB; Flags: Precursor
 gi|172047657|sp|A5F753|TOLB_VIBC3 RecName: Full=Protein tolB; Flags: Precursor
 gi|254764844|sp|C3LND9|TOLB_VIBCM RecName: Full=Protein tolB; Flags: Precursor
 gi|10441440|gb|AAG17042.1|AF187269_4 TolB [Vibrio cholerae O395]
 gi|9656363|gb|AAF94984.1| tolB protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121630033|gb|EAX62440.1| tolB protein [Vibrio cholerae V52]
 gi|124115421|gb|EAY34241.1| tolB protein [Vibrio cholerae 1587]
 gi|124124041|gb|EAY42784.1| tolB protein [Vibrio cholerae MZO-3]
 gi|146316320|gb|ABQ20859.1| tolB protein [Vibrio cholerae O395]
 gi|148875982|gb|EDL74117.1| tolB protein [Vibrio cholerae 623-39]
 gi|227009853|gb|ACP06065.1| tolB protein [Vibrio cholerae M66-2]
 gi|227013735|gb|ACP09945.1| tolB protein [Vibrio cholerae O395]
 gi|229332915|gb|EEN98401.1| TolB protein precursor [Vibrio cholerae 12129(1)]
 gi|229337435|gb|EEO02452.1| TolB protein precursor [Vibrio cholerae bv. albensis VL426]
 gi|229343522|gb|EEO08497.1| TolB protein precursor [Vibrio cholerae RC9]
 gi|229347921|gb|EEO12880.1| TolB protein precursor [Vibrio cholerae TMA 21]
 gi|229351659|gb|EEO16600.1| TolB protein precursor [Vibrio cholerae B33]
 gi|229355572|gb|EEO20493.1| TolB protein precursor [Vibrio cholerae BX 330286]
 gi|229370283|gb|ACQ60706.1| TolB protein precursor [Vibrio cholerae MJ-1236]
 gi|254844627|gb|EET23041.1| tolB protein [Vibrio cholerae MO10]
 gi|255737232|gb|EET92628.1| TolB protein precursor [Vibrio cholera CIRS 101]
 gi|297536949|gb|EFH75782.1| tolB protein [Vibrio cholerae RC385]
 gi|297542458|gb|EFH78508.1| tol-Pal system beta propeller repeat protein TolB [Vibrio cholerae
           MAK 757]
 gi|327484391|gb|AEA78798.1| tolB protein precursor [Vibrio cholerae LMA3894-4]
          Length = 450

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 108/458 (23%), Positives = 205/458 (44%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L  +L+LIG  F    +A +++       +  P++I   K+    +L   VS V++
Sbjct: 1   MFKRLVFVLMLIGTGFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ +      Q   + + +  F  W S+G   L+TG + +  +    + ++L
Sbjct: 61  SDLQRSGKFSPVPTSKMPQTPYSEEQV-NFGKWTSMGVDSLLTGTITQNAEGSYVISYQL 119

Query: 131 WDVKDRKQ---------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            D+   +                      +  K      +  R+ AH I+D +Y+ +TGE
Sbjct: 120 VDIVRGQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V  +         L + D DG N R +  S+ Q L  P +SP+ Q +AY 
Sbjct: 180 RGAFLTRIAYVVVN-DKDPYPYQLRIADYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +Y+M+    +  +++ +F     APRFS +GK   + + K   + +Y++DL
Sbjct: 238 SFQNGQA-EIYMMNIYSGK-REKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +     +T+    N    + PD   ++F SDR GK Q+Y +  +G + KR++     + 
Sbjct: 296 ATRRLTEVTSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S  
Sbjct: 356 GGQ-ITPDGKFLVMVNRSDSGFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +    + L  + ++GR +  L  T      P W  F+
Sbjct: 415 YN--KANVLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|84516652|ref|ZP_01004011.1| translocation protein TolB precursor [Loktanella vestfoldensis
           SKA53]
 gi|84509688|gb|EAQ06146.1| translocation protein TolB precursor [Loktanella vestfoldensis
           SKA53]
          Length = 438

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 165/439 (37%), Positives = 248/439 (56%), Gaps = 10/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI----DELGGKVSEV 68
           MK  L LL+ L+      +    +++        P++ A   F +      +L  +++ +
Sbjct: 2   MKRILTLLIALMFAGPAFAQGGPLRLTITDGVIEPITFAVPSFEAETPQAGQLASELTRL 61

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V+++L  + +F  +   +F  ++ +      F DW ++ AQ LV G V   G D++ V+F
Sbjct: 62  VAQNLSGTGLFREVPASAFISQVGSFAQPVAFADWRAVNAQALVIGAVSMTG-DQVNVKF 120

Query: 129 RLWDVKDRKQIIG-KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           RL+DV   +++ G  +F  + A WR++ H +SD +Y  ITGE G F+SR++FV+ES    
Sbjct: 121 RLFDVFSGQELGGGLQFAGTTAGWRRMGHKVSDAVYSRITGEGGYFDSRVVFVAESGPKD 180

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L VMD DGAN+++LT S   I+  PRFSP   +V Y +++     R+ L+D    
Sbjct: 181 NRLKRLAVMDYDGANVQFLTDSSS-IVLAPRFSPRGDQVLYTSFESG-FPRINLLDVADV 238

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              +       M  +PRFS +G++ + S+      DIY  DL +    RLT T  I+ + 
Sbjct: 239 ARRQIATAPGEMSFSPRFSRDGRQVIYSLSNGATTDIYRTDLDTGQHVRLTATPSIDTAP 298

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S SPD SQIVFESDR G +QLY+M S G D +RIS   E  Y  PVWSP+GDL+AFTK +
Sbjct: 299 SLSPDGSQIVFESDRSGSQQLYIMSSTGGDARRISF-GEGRYSTPVWSPRGDLVAFTKQN 357

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGR 426
             +F IGVM+ DGS+ERLL      +APTWSP+GR ++F+R+  G D  S LYS+D++GR
Sbjct: 358 AGRFHIGVMRTDGSEERLLTSSFLDEAPTWSPNGRVIMFTRETQGADGASALYSVDISGR 417

Query: 427 NETLINTPAYASDPQWVGF 445
           N   +   + ASD  W   
Sbjct: 418 NLRAVPIQSAASDASWGPL 436


>gi|149192087|ref|ZP_01870311.1| translocation protein TolB precursor [Vibrio shilonii AK1]
 gi|148834073|gb|EDL51086.1| translocation protein TolB precursor [Vibrio shilonii AK1]
          Length = 442

 Score =  398 bits (1023), Expect = e-108,   Method: Composition-based stats.
 Identities = 105/450 (23%), Positives = 204/450 (45%), Gaps = 32/450 (7%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDV 78
           + L+  F   + +A +++       +  P++I   K+    +L   VS V++ DLQRS  
Sbjct: 1   MALVLSFAAQTANAALELVITDGIDSARPIAIVPFKWEGEGKLPHDVSAVIASDLQRSGK 60

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F+ ++     Q   +   I  F+ W S+G   L+TG ++K  +    V ++L DV   + 
Sbjct: 61  FSPVATSKMPQTPYDASDI-NFEAWTSIGVDSLLTGTIVKNAEGNYEVSYQLVDVVRGQL 119

Query: 139 ---------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
                                +  KK        R+ AH ISD +Y+ +TGE+G F +RI
Sbjct: 120 TGGKSKALSDDGQLVLSNDHVLFKKKATVPGNRLREYAHRISDLVYEELTGERGAFLTRI 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V  +         + + D DG N + +  S+ Q L  P +SP+ +K+AY ++ +    
Sbjct: 180 AYVVVN-DKDQYPYQMRIADYDGYNEKLVLRSK-QPLMSPAWSPDGKKLAYVSFQNGQA- 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++M+    +  ++I +F     APRFS +GK   +++ K   + +Y+++L++    ++
Sbjct: 237 EIFIMNIYTGK-REKITSFPRHNGAPRFSPDGKTLALTLSKTGQLHVYTLNLETRKLRQI 295

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T+    N    + PD   ++F SDR G  Q+Y +  +    KRI+     +      +P 
Sbjct: 296 TSGRSNNTEPFWKPDGKSLIFTSDRGGNPQIYEVNLSDGKTKRITWQGRQNLGGQ-ITPD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S   +    + 
Sbjct: 355 GRYLVMVNRSNSGFNLAKQDLETGSVQILTKTLLDESPSIAPNGGMVIYSSIYN--KTNV 412

Query: 418 LYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           L  + ++GR +  L  T      P W  F+
Sbjct: 413 LSMVSIDGRFKARLPATNGRVRAPAWSPFL 442


>gi|262404182|ref|ZP_06080737.1| TolB protein precursor [Vibrio sp. RC586]
 gi|262349214|gb|EEY98352.1| TolB protein precursor [Vibrio sp. RC586]
          Length = 450

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 108/458 (23%), Positives = 204/458 (44%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L  +L+LIG  F    +A +++       +  P++I   K+    +L   VS V++
Sbjct: 1   MFKRLIFVLMLIGTGFTNVANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ +      Q   + + I  F  W SLG   L+TG + +  +    + ++L
Sbjct: 61  SDLQRSGKFSPVPTSKMPQTPYSEEQI-DFGKWTSLGVDSLLTGTITQNAEGSYVISYQL 119

Query: 131 WDVKDRKQ---------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            D+   +                      +  K      +  R+ AH I+D +Y+ +TGE
Sbjct: 120 VDIVRGQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRLREYAHRIADLVYEELTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +R+ +V  +         L + D DG N R +  S+ Q L  P +SP+ Q +AY 
Sbjct: 180 RGAFLTRVAYVVVN-DKDPYPYQLRIADYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +Y+M+    +  +++ +F     APRFS +GK   + + K   + +Y++DL
Sbjct: 238 SFQNGQA-EIYMMNIYSGQ-REKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +   + +T+    N    + PD   ++F SDR GK Q+Y +     + KR++     + 
Sbjct: 296 ATRRLKEVTSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLTSGETKRLTWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S  
Sbjct: 356 GGQ-ITPDGKFLVMVNRSDSGFNLAKQDLETGALQILTKTLLDESPSIAPNGGMVIYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +    + L  + ++GR +  L  T      P W  F+
Sbjct: 415 YN--KANVLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|332188231|ref|ZP_08389959.1| tol-Pal system beta propeller repeat protein TolB [Sphingomonas sp.
           S17]
 gi|332011730|gb|EGI53807.1| tol-Pal system beta propeller repeat protein TolB [Sphingomonas sp.
           S17]
          Length = 472

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 162/431 (37%), Positives = 229/431 (53%), Gaps = 16/431 (3%)

Query: 26  GFFPTSIHAFVKVATNSANYSPVSIAFTKF----------VSIDELGGKVSEVVSKDLQR 75
              P +    + V       +P+ IA               + D +G ++S++++ DL+ 
Sbjct: 45  AVAPANGQEGLVVDVEGGISAPMPIAIPAMPTNAVVQTAAGTTDVVGQQLSQIIANDLRN 104

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F  I     +       + P F  WN  GAQ LV G V   G   L V   L+DV  
Sbjct: 105 SGLFTPIPPAQLRTVSFPEVTAPAFDYWNGTGAQALVQGYVRANGDGTLTVGCYLYDVLA 164

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           + ++  + F   PA WR+ AH  +D IY  +TGE   F+SRI++VSE+         L +
Sbjct: 165 KSELARQGFVVQPAEWRRAAHKCADSIYTKLTGEGPYFDSRIVYVSETGPKARRIKRLAI 224

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD+DGAN R+LT  +  I+  PRF+PNQQ + Y +Y D+    +Y+ D    R    + N
Sbjct: 225 MDQDGANHRFLTNGQS-IVLTPRFAPNQQSIVYMSYVDKRPA-IYVYDIGSGRQRLVVQN 282

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             +   APRFS +G+  L S+ +    DIY V  Q    +RLTN+  I+   SYSPD S+
Sbjct: 283 AAT-TFAPRFSPDGRWILFSMAQGGNTDIYRVSAQGGTPQRLTNSPGIDTGGSYSPDGSK 341

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           IVFESDR G +Q+YVM ++GS+Q+RIS      Y  PVWSP+GDLIAFTK  G  F IG+
Sbjct: 342 IVFESDRSGGQQIYVMNADGSNQQRISFGG-GRYATPVWSPRGDLIAFTKL-GGAFRIGI 399

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTP 434
           M   G  E+LL      + P+WSP+GR + F R   G +G + ++ +DL G NE  I TP
Sbjct: 400 MNPSGGAEKLLTNSWQDEGPSWSPNGRVITFQRTTQGSSGKADVWMVDLTGVNERRIPTP 459

Query: 435 AYASDPQWVGF 445
              SDP W   
Sbjct: 460 LDGSDPAWGPL 470


>gi|92113976|ref|YP_573904.1| translocation protein TolB [Chromohalobacter salexigens DSM 3043]
 gi|119371041|sp|Q1QWF3|TOLB_CHRSD RecName: Full=Protein tolB; Flags: Precursor
 gi|91797066|gb|ABE59205.1| TolB-like protein [Chromohalobacter salexigens DSM 3043]
          Length = 428

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 113/441 (25%), Positives = 215/441 (48%), Gaps = 14/441 (3%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
            + LN+     LL++  G       HA + +     +   + IA     + D+L   VS 
Sbjct: 1   MKRLNLWAASLLLMLCAGM-----AHAELTIEITKGSDQAIPIAIVPMANGDDLPENVSR 55

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +VS DL+RS  F  + ++S   + ++ + +  +QDW  L +  LV G++  +G    R++
Sbjct: 56  IVSNDLERSGRFEPLPRESLISRPSSSEEVH-YQDWQQLDSDYLVVGKIDNQG-GEYRIQ 113

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           + L +V  + +++G+   SS    R  AH ISD I++ ITG +G F++ I +V+ S V  
Sbjct: 114 YELLNVNGQNRMLGEVVTSSRDQLRDSAHYISDQIFEEITGIRGAFSTSIAYVTASGVGD 173

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
            I  +L V D DG N + +  S D+ +  P +SP+  K+AY +++      +Y+ +    
Sbjct: 174 DIDYALSVADADGHNSQQIL-SSDEPILSPAWSPDGGKLAYVSFETGRP-GIYVQNLATG 231

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +   R+ +F  +  AP +S +G++  +S+ KD   +IY +D+ S    RLT +  I+   
Sbjct: 232 QRV-RLTSFEGINGAPAWSPDGRKLAMSLSKDGQPEIYVMDIASRDLRRLTQSDAIDTEP 290

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            ++P+   ++F SDR G  Q+Y         +R++     +     +SP GD I      
Sbjct: 291 EWAPNGRSLIFTSDRSGNPQIYRYDLGSGRAERLTFTGSYNSRG-RFSPDGDAIFMVTRD 349

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              + +     D  +  +L +    ++P+ +P+G  +IF+ ++   T   L ++  +G  
Sbjct: 350 DSGYHVARQDLDTDRMTILTDSDWDESPSVAPNGTMVIFATQEG--TRGVLGAVSADGSA 407

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + +P     +P W  F+D
Sbjct: 408 SFRLPSPQGDVREPAWSPFLD 428


>gi|238765245|ref|ZP_04626174.1| hypothetical protein ykris0001_32600 [Yersinia kristensenii ATCC
           33638]
 gi|238696517|gb|EEP89305.1| hypothetical protein ykris0001_32600 [Yersinia kristensenii ATCC
           33638]
          Length = 430

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 102/434 (23%), Positives = 197/434 (45%), Gaps = 13/434 (2%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
           C + +     + + +HA V++       +  P+ +   K++       ++  +V  DL+ 
Sbjct: 5   CRVALGFLVLWASVLHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEEIGAIVGADLRN 64

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV-- 133
           S  FN I      Q+ +    +     W +LG   +V G+V         V ++L D   
Sbjct: 65  SGKFNPIDAARMPQQPSTAAEV-TPAAWTALGIDAVVVGQVQPSADGSFVVSYQLVDTSG 123

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
                +   ++  +    R  AHT SD++++ +TG KG F +RI +V ++   G   + L
Sbjct: 124 AAGSVLAQNQYKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGKFPHEL 182

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V D DG N +++     + L  P +SP+  K+AY T++        ++ T  + A +++
Sbjct: 183 RVSDYDGYN-QFVVHRSPEPLMSPAWSPDGSKIAYVTFESGK--SALVIQTLANGAIRQV 239

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   S+ PDS
Sbjct: 240 ASFPRHNGAPAFSPDGTKLAFALSKSGSLNLYVMDLGSGQISQVTDGRSNNTEPSWFPDS 299

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             + + SD+ G+ Q+Y +  NG   +RI+ +   +    V SP G  +A    +G    I
Sbjct: 300 QNLAYTSDQGGRPQVYKVNINGGAPQRITWEGSQNQNADV-SPDGKFLALVSSNGGAQHI 358

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLIN 432
             M       ++L +    + P+ +P+G  +I+S  +    G+ L  +  +GR +  L  
Sbjct: 359 AKMDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSTQG--LGAVLQLVSTDGRFKARLPA 416

Query: 433 TPAYASDPQWVGFM 446
           T      P W  ++
Sbjct: 417 TDGQVKFPAWSPYL 430


>gi|28871117|ref|NP_793736.1| tolB protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|32699697|sp|Q87Y40|TOLB_PSESM RecName: Full=Protein tolB; Flags: Precursor
 gi|28854367|gb|AAO57431.1| tolB protein [Pseudomonas syringae pv. tomato str. DC3000]
          Length = 433

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 110/441 (24%), Positives = 213/441 (48%), Gaps = 15/441 (3%)

Query: 14  KINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            INL   L+++  F    + A    + V + S   +P+++    +   + L   ++E++S
Sbjct: 1   MINLFRGLLVVLCFASAMVAAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIIS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L
Sbjct: 61  NDLRNSGYYAPIPKQNMISLPTQASEVI-FRDWKALGAQYVMVGNITPAG-GRLQIQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFF 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D S + F SDR GK Q+Y    NG   +R++     +  +P  S     +        
Sbjct: 296 GKDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F + V        ++L + +  ++PT +P+G  +I++ ++ G     L  + +NGR 
Sbjct: 355 FTNFKVAVQDLARGSVKILTDSNLDESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|157825542|ref|YP_001493262.1| translocation protein TolB [Rickettsia akari str. Hartford]
 gi|166229986|sp|A8GMX9|TOLB_RICAH RecName: Full=Protein tolB; Flags: Precursor
 gi|157799500|gb|ABV74754.1| translocation protein TolB precursor [Rickettsia akari str.
           Hartford]
          Length = 444

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 167/451 (37%), Positives = 251/451 (55%), Gaps = 23/451 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE----LGGKVSEV 68
           M+  +  +L+L+  F     +A   +       +P  IA  KF         LG  V +V
Sbjct: 1   MRNIIYFILLLLFSF---KGYALETINIEHGQAAPTPIAVNKFNIDSSADYVLGNDVVKV 57

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +S DL+ S VF  IS  SF ++ T  +  P F  W  + A +LV G + K    +L++ F
Sbjct: 58  ISNDLKLSGVFCPISSASFIEERTGIEYKPLFAAWRQINASLLVNGEIKKLESGKLKISF 117

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            LWD    KQ+ G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     
Sbjct: 118 ILWDTLLEKQLAGEILEVPENLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESTSLPK 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           IK  + +MD DGAN +YLT  R  ++  PRF+ +  K+ Y +Y  +    VY  D +  +
Sbjct: 178 IK-RIALMDYDGANNKYLTNGRS-LVLTPRFARSADKIFYVSYATKRRALVYEKDLKTGK 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
               +G+F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S S
Sbjct: 236 ES-VVGDFSGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKRLHKLTDGFGINTSPS 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-- 366
           YSPD  +IV+ SDR G  QLY+M S+GSD +RIS     SY  P WSP+GD IAFTK   
Sbjct: 295 YSPDGKKIVYNSDRNGVPQLYIMNSDGSDVQRISFGG-GSYTAPSWSPRGDYIAFTKIIR 353

Query: 367 --SGEKFAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGS 416
              G+ F IG+MK     D ++ER++     +++P WSP+GR ++F+            +
Sbjct: 354 GAEGKTFNIGIMKAYPQDDENRERIITSGYLVESPCWSPNGRVIMFAKGWPSGAKAPGKN 413

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           K+++IDL G NE  I TP  ASDP+W G ++
Sbjct: 414 KIFAIDLTGHNEREIITPEDASDPEWSGVLN 444


>gi|89900876|ref|YP_523347.1| translocation protein TolB [Rhodoferax ferrireducens T118]
 gi|119371056|sp|Q21WN7|TOLB_RHOFD RecName: Full=Protein tolB; Flags: Precursor
 gi|89345613|gb|ABD69816.1| TolB-like [Rhodoferax ferrireducens T118]
          Length = 425

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 114/439 (25%), Positives = 201/439 (45%), Gaps = 18/439 (4%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
            + +  +I LCLL+ +        + A  +V  +    + + IA + F   D +  K++ 
Sbjct: 1   MQMMKKRILLCLLVGMTCL----PVLAQFRVEVSGVGLTQLPIAVSAFRGQDSVPQKIAA 56

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +V  DL+RS  F  +          +  + P    W   GA  LVTG V +    R  V 
Sbjct: 57  IVQADLERSGQFRGVDT---VGAALDEGTRPDVALWRQKGADSLVTGSVSRLADGRYDVR 113

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           FRLWDV   + + G+ +  + A  R  AH I+D IY+ +TG+KG F++RI +V+      
Sbjct: 114 FRLWDVVRGQDLGGQSYAVTQADLRLSAHRIADFIYEKLTGDKGAFSTRITYVT----KA 169

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  L V D DG N +    S + I+  P +SPN  ++AY +++    + VY  D    
Sbjct: 170 AQRYQLWVADADGENAQSALASPEPII-SPAWSPNGSQIAYVSFESRKPV-VYTHDVATG 227

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  + I NFR    AP +S +G+   +++ +D    +Y++D       RL     I+   
Sbjct: 228 K-RRLIANFRGSNSAPAWSPDGRTLAVTLSRDGGSQLYAIDAGGGEPRRLAQNSSIDTEP 286

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            Y+PD   I F SDR G  Q+Y M   G   +R++     +   P  SP G  +A+    
Sbjct: 287 VYAPDGKNIYFVSDRGGAPQIYRMPVTGGGAERVTFTGTYN-ISPAISPDGRWLAYISRV 345

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR- 426
              F + V++        + + +  ++P+++P+ R ++++ +  G     L +  ++G+ 
Sbjct: 346 SGAFKLHVLELASGAVTAITDTTADESPSFAPNSRLIVYATQSQGR--EALMTATVDGKV 403

Query: 427 NETLINTPAYASDPQWVGF 445
              L        +P W  F
Sbjct: 404 KARLAGQNGDIREPGWGPF 422



 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 78/191 (40%), Gaps = 14/191 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS    R     +  +   ++  D      +    +    IS ++SP+ SQI + S   
Sbjct: 158 AFS---TRITYVTKAAQRYQLWVADADGENAQSALASPEPIISPAWSPNGSQIAYVSFES 214

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            K  +Y        ++R+  +   S   P WSP G  +A T        +  +   G + 
Sbjct: 215 RKPVVYTHDVATG-KRRLIANFRGSNSAPAWSPDGRTLAVTLSRDGGSQLYAIDAGGGEP 273

Query: 384 RLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPA 435
           R L ++S++   P ++P G+++ F   + G    ++Y + + G     +        +PA
Sbjct: 274 RRLAQNSSIDTEPVYAPDGKNIYFVSDRGG--APQIYRMPVTGGGAERVTFTGTYNISPA 331

Query: 436 YASDPQWVGFM 446
            + D +W+ ++
Sbjct: 332 ISPDGRWLAYI 342



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 52/164 (31%), Gaps = 12/164 (7%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R++A   S D       +       I FVS+   +      +  M   G     +T +  
Sbjct: 274 RRLAQNSSIDTEPVYAPDG----KNIYFVSDRGGAP----QIYRMPVTGGGAERVTFTG- 324

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
                P  SP+ + +AY +       ++++++              +   +P F+ N + 
Sbjct: 325 TYNISPAISPDGRWLAYIS-RVSGAFKLHVLELASGAVTAI--TDTTADESPSFAPNSRL 381

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + + Q      + +  +      RL           + P   Q
Sbjct: 382 IVYATQSQGREALMTATVDGKVKARLAGQNGDIREPGWGPFQKQ 425


>gi|153832465|ref|ZP_01985132.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio harveyi
           HY01]
 gi|148871260|gb|EDL70132.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio harveyi
           HY01]
          Length = 450

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 108/458 (23%), Positives = 198/458 (43%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L L + ++ G   +  HA +++       +  P+++   K+   + L   +S V++
Sbjct: 1   MIKRLLLGMFVLLGSLTSVAHAALELVITDGIDSARPIAVVPFKWEGSEPLPTDISAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ +      Q   N   +  F  W  LG   L+TG + K  +    V ++L
Sbjct: 61  SDLQRSGKFSPVPTSKMPQTPFNESEV-NFDAWTGLGVDALLTGSIKKNEQGNYVVNYQL 119

Query: 131 WDVKDRKQIIGKK---------------------FFSSPASWRKIAHTISDDIYQSITGE 169
            DV   +   GK                              R+ AH ISD +Y+ +TGE
Sbjct: 120 VDVVRGQLTGGKSKALGGDGELVLSKDHVLFNKVATVEGPRMREYAHRISDLVYEQLTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V  +         L V D DG N R +  S+ Q L  P +SP+ QK+AY 
Sbjct: 180 RGAFMTRIAYVVVN-DKDNFPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGQKLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +++M+       ++I ++     APRFS +G +  + + K  ++ +Y++DL
Sbjct: 238 SFQNGQA-EIFIMNIYTGE-REKITSYPRHNGAPRFSPDGSQLALVLSKTGSLQVYTLDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           ++    ++T     N    + PD   ++F SDR GK Q+Y +        R++     + 
Sbjct: 296 KTRKLTQITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVDLGSGSTNRLTWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S  
Sbjct: 356 GGQ-ITPDGRFLVMVNRSDSGFNLAKQDLETGALQVLTKTLLDESPSIAPNGGMVIYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +      L  + ++GR +  L  T      P W  F+
Sbjct: 415 YNKKN--VLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|197336086|ref|YP_002155723.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio fischeri
           MJ11]
 gi|226705896|sp|B5FD05|TOLB_VIBFM RecName: Full=Protein tolB; Flags: Precursor
 gi|197317576|gb|ACH67023.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio fischeri
           MJ11]
          Length = 450

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 111/458 (24%), Positives = 201/458 (43%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M     L L ++   F     A +++       +  P+ I   K+    +L   +S ++S
Sbjct: 1   MLKRWILTLFVVCLGFSQVAKAELELVITEGIDSARPIGIVPFKWHGEGKLPQDISAIIS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ I  +   Q     DS   ++ W  +G   +VTG V    + +  V ++L
Sbjct: 61  SDLQRSGKFSPIPTNKMPQTPYK-DSDINYEAWTKMGVDAIVTGEVKLNAQGKYEVTYKL 119

Query: 131 WDVKDRKQ---------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            DV   +                      ++ K    S    RK AH ISD +Y+ +TGE
Sbjct: 120 IDVVRGQLTKGQSKALDESGKLVLTRDHILVNKVASLSTKQLRKYAHRISDVVYEKLTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V  +         L + D DG N R +  S+  I   P +SP+ +K+AY 
Sbjct: 180 RGAFLTRIAYVVVN-DKAQYPYQLRIADYDGYNERLVLKSKQPI-MSPAWSPDGKKLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++++    ++++M+    +  + I ++     APRFS +G +  I + K  ++ IY VDL
Sbjct: 238 SFENRKS-QIFIMNIYTGK-RELIASYPRHNGAPRFSHDGDKLAIVLSKSGSLQIYVVDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           ++    ++T     N    ++PD+  ++F SDR GK Q+Y +       KR++     + 
Sbjct: 296 KTKKMSQITRGRANNTEPFWAPDNKSLIFTSDRGGKPQIYRVNLGDGSTKRLTWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  I     S   F +     +    ++L +    ++P+ +P+G  +I+S  
Sbjct: 356 GGQ-ITPDGKYIVMVNRSETGFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGMVIYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
                 + L  + ++GR +  L  T      P W  F+
Sbjct: 415 Y--RKQNVLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|117619070|ref|YP_858094.1| beta-propeller repeat-containing to-pal system protein TolB
           [Aeromonas hydrophila subsp. hydrophila ATCC 7966]
 gi|166988073|sp|A0KP93|TOLB_AERHH RecName: Full=Protein tolB; Flags: Precursor
 gi|117560477|gb|ABK37425.1| Tol-Pal system beta propeller repeat protein TolB [Aeromonas
           hydrophila subsp. hydrophila ATCC 7966]
          Length = 441

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 108/449 (24%), Positives = 205/449 (45%), Gaps = 23/449 (5%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSK 71
            I      ++       S  A + +       +  P+++A  K+    +L   ++EVVS 
Sbjct: 1   MIRKVFFALVGCLLLGQSAQAALDIVITGGIDSARPIAVAPFKWEGNGQLPQDIAEVVSN 60

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  F  +++    Q  +    I  F  W S G + +V G +   G    ++ F L 
Sbjct: 61  DLMRSGKFKPLARGQMPQTPSTSGEI-NFAPWASQGVEAVVVGSIAAVGDGTYKINFELV 119

Query: 132 DVKDRKQ------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           DV   +             +  +      A  R+ AH ISD +Y+ +TGE+G F +R+ +
Sbjct: 120 DVLKGQLAKAQGGESNGYILDSRMATIPGAQMRQFAHRISDIVYERLTGERGAFLTRLAY 179

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           VS    +      L + D DG N + L  SR+  L  P +SP+  K+AY +++++    +
Sbjct: 180 VSVQQGT-QFPYQLRIADYDGYNEKTLLRSREP-LMSPAWSPDGSKLAYVSFENQKS-EI 236

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y+ D    +    I +FR +  AP +S +G+R  I + KD + ++Y VD+ S    R+T 
Sbjct: 237 YVQDIYT-QQRSLITSFRGINGAPEWSPDGRRLAIVLSKDGSPNLYVVDVASKQLTRVTT 295

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +  I+   S+ PD   ++F S+R GK Q+Y +       +R++ + E++      +P G 
Sbjct: 296 SRVIDTEPSWMPDGQNLLFTSERGGKPQIYSVNLATGMTRRMTWEGESNQGA-SITPDGK 354

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           ++        ++ I     + +   +L + +  ++P+ +P+G  +I++    G     L 
Sbjct: 355 IMVMVTRVQGQYRIARQDMENNALLVLTQSALDESPSVAPNGSMIIYATIYQGRKSLAL- 413

Query: 420 SIDLNGRNETLINT-PAYASDPQWVGFMD 447
            +  +GR + ++ T       P W  F++
Sbjct: 414 -VSTDGRFKAVLPTSSGEIRAPAWSPFLN 441


>gi|301384814|ref|ZP_07233232.1| translocation protein TolB [Pseudomonas syringae pv. tomato Max13]
 gi|302063532|ref|ZP_07255073.1| translocation protein TolB [Pseudomonas syringae pv. tomato K40]
 gi|302130604|ref|ZP_07256594.1| translocation protein TolB [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|331016445|gb|EGH96501.1| translocation protein TolB [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 433

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 111/441 (25%), Positives = 213/441 (48%), Gaps = 15/441 (3%)

Query: 14  KINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            INL   L+++  F    + A    + V + S   +P+++    +   + L   ++E+VS
Sbjct: 1   MINLFRGLLVVLCFASAMVAAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIVS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L
Sbjct: 61  NDLRNSGYYAPIPKQNMISLPTQASEVI-FRDWKALGAQYVMVGNITPAG-GRLQIQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFF 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D S + F SDR GK Q+Y    NG   +R++     +  +P  S     +        
Sbjct: 296 GKDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F + V        ++L + +  ++PT +P+G  +I++ ++ G     L  + +NGR 
Sbjct: 355 FTNFKVAVQDLARGSVKILTDSNLDESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|302187151|ref|ZP_07263824.1| translocation protein TolB [Pseudomonas syringae pv. syringae 642]
 gi|330936711|gb|EGH40899.1| translocation protein TolB [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330950602|gb|EGH50862.1| translocation protein TolB [Pseudomonas syringae Cit 7]
          Length = 433

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 110/441 (24%), Positives = 213/441 (48%), Gaps = 15/441 (3%)

Query: 14  KINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            INL   L+++  F    + A    + V + S   +P+++    +   + L   ++E++S
Sbjct: 1   MINLFRGLLVVLCFASAMVSAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIIS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L
Sbjct: 61  NDLRNSGYYAPIPKQNMISLPTQASEVI-FRDWKALGAQYVMVGNITPAG-GRLQIQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFF 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D S + F SDR GK Q+Y    NG   +R++     +  +P  S     +        
Sbjct: 296 GKDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F + V        ++L + +  ++PT +P+G  +I++ ++ G     L  + +NGR 
Sbjct: 355 FTNFKVAVQDLARGSVKILTDSNLDESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|253990433|ref|YP_003041789.1| translocation protein TolB [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781883|emb|CAQ85047.1| periplasmic protein involved in the tonb-independent uptake of
           group colicins [Photorhabdus asymbiotica]
          Length = 451

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 103/449 (22%), Positives = 198/449 (44%), Gaps = 13/449 (2%)

Query: 3   LRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDE 60
           LR F  ++ +M      +++ I   + T  HA V++       +  P+ I   K+     
Sbjct: 11  LRRFHRDKGDMMKQAFKVMLSILMLWVTVAHAEVRIEITQGVDSARPIGIVPFKWTGASN 70

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
              ++  +V  DL+ S  FN I      Q+ T    +     W++LG   +V G++    
Sbjct: 71  APEEIGTIVGADLRNSGKFNPIDASRMPQQPTTASEV-TPAAWSALGIDAVVVGQIQPSA 129

Query: 121 KDRLRVEFRLWDVKDR-KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRIL 178
                + ++L D       ++ +  F     W R  AHT SD++++ +TG KG F +R+ 
Sbjct: 130 DGSFLISYQLVDTAGAPGTVLAQNQFKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRLA 189

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           ++ ++   G     L V D DG N ++      + L  P +SP+  K+AY T++      
Sbjct: 190 YIVKTN-GGKYPYELRVSDYDGYN-QFTVHRSPEPLMSPAWSPDGAKLAYVTFESGR--S 245

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
             ++ T      +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T
Sbjct: 246 ALVIQTLASGEVRQVASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMDLSSAQIRQVT 305

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +    N   S+ PD+  +V+ SD+ G+ QLY +  NG   +R++ +   +  D   S  G
Sbjct: 306 DGRSNNTEPSWMPDNQTLVYTSDQGGRPQLYKININGGAPQRLTWEGTQNQ-DADVSADG 364

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           + +        K  I          + L +    + P+ +P+G  +I+S  +    G+ L
Sbjct: 365 NFVVMVSSESGKQHIAKQDLATGAVQTLTDTFLDETPSIAPNGTMVIYSSTQG--LGTVL 422

Query: 419 YSIDLNGRNE-TLINTPAYASDPQWVGFM 446
             +  +GR +  L  T      P W  ++
Sbjct: 423 QLVSTDGRFKARLPATDGQVKFPAWSPYL 451


>gi|118574585|sp|Q1GYT1|TOLB_METFK RecName: Full=Protein tolB; Flags: Precursor
          Length = 433

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 116/431 (26%), Positives = 211/431 (48%), Gaps = 15/431 (3%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK---VSEVVSKDLQ 74
               +L  G    + H  + V         + IA   F     + G+   ++ V+  DL+
Sbjct: 10  FFAFLLPFGMATGAAHGALTVEIVGGAAQQIPIAVVPFAQQGVIPGQQDTIANVIGADLR 69

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           RS +F ++       + ++   +  +QDW ++ AQ L  G +     +RL+V FRL DV 
Sbjct: 70  RSGLFRVLETRGVANQPSDISQV-NYQDWAAIQAQALTIGNIETLPGNRLKVSFRLLDVY 128

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            + Q++G ++  +P+  R  AH I+D IYQ +TGE+G F +RI +VS+S      + +L 
Sbjct: 129 KQSQLVGMEYNITPSQLRLTAHKIADVIYQKLTGEQGVFATRIAYVSKSGG----RYALQ 184

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V D DG N + +  S + I+  P +SP+  K+AY +++ +    +  + + +      + 
Sbjct: 185 VADSDGYNPQTVVSSAEPII-SPVWSPDGTKLAYVSFEKKKP--IIYVQSLVSGQRTVLA 241

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           NF+    AP +S +GKR  I +       IYS++      ++LT T  I+   ++SPD  
Sbjct: 242 NFKGNNSAPAWSPDGKRLAIVLTHAANSQIYSINADGTGLQQLTRTTAIDTEPTWSPDGR 301

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            I F SDR G  Q+Y M S+G +  R++ +       P  SP G  +A+ +  G +F + 
Sbjct: 302 YIYFTSDRGGSPQIYRMPSSGGEASRMTFEGSY-VVSPRLSPDGKSLAYIRRDGGQFRVA 360

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINT 433
           +      Q ++L +    ++P+++P+GR L+ + +  G     L ++  +GR  + L  +
Sbjct: 361 LQDLQTGQVQVLSDGPKDESPSFAPNGRMLLHATRVGGRGA--LAAVSADGRVKQRLSES 418

Query: 434 PAYASDPQWVG 444
                +P W  
Sbjct: 419 GGDVREPAWGP 429



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 11/141 (7%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +++I + S   G+  L V  S+G + + +    E     PVWSP G  +A+  F  +K  
Sbjct: 168 ATRIAYVSKSGGRYALQVADSDGYNPQTVVSSAE-PIISPVWSPDGTKLAYVSFEKKKPI 226

Query: 373 IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           I V      Q  +L     N  AP WSP G+ L           S++YSI+ +G     +
Sbjct: 227 IYVQSLVSGQRTVLANFKGNNSAPAWSPDGKRLAIVLTHA--ANSQIYSINADGTGLQQL 284

Query: 432 N-------TPAYASDPQWVGF 445
                    P ++ D +++ F
Sbjct: 285 TRTTAIDTEPTWSPDGRYIYF 305


>gi|238757962|ref|ZP_04619143.1| hypothetical protein yaldo0001_8380 [Yersinia aldovae ATCC 35236]
 gi|238703716|gb|EEP96252.1| hypothetical protein yaldo0001_8380 [Yersinia aldovae ATCC 35236]
          Length = 430

 Score =  397 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 102/445 (22%), Positives = 198/445 (44%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +   +L       +   +HA V++       +  P+ +   K++       +
Sbjct: 1   MKQAFRVALGFLVL-------WAAVLHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEE 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V  DL+ S  FN I      Q+ +    +     W +LG   +V G+V        
Sbjct: 54  IGAIVGADLRNSGKFNPIDAARMPQQPSTAAEV-TPAAWTALGIDAVVVGQVQPSADGSY 112

Query: 125 RVEFRLWDV--KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D        +   ++  +    R  AHT SD++++ +TG KG F +RI +V +
Sbjct: 113 VVSYQLVDTSGAAGSILAQNQYKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G   + L V D DG N +++     Q L  P +SP+  K+AY T++        ++
Sbjct: 173 TN-GGKFPHELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKIAYVTFESGK--SALVI 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A K++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+   
Sbjct: 229 QTLANSAIKQVASFPRHNGAPAFSPDGTKLAFALSKSGSLNLYVMDLGSGQISQVTDGRS 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N   S+ PDS  + + SD+ G+ Q+Y +  NG   +RI+ +   +    V SP G  + 
Sbjct: 289 NNTEPSWFPDSQNLAYTSDQGGRPQVYKVNINGGAPQRITWEGSQNQNADV-SPDGKFLV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +G    I     +    ++L +    + P+ +P+G  +I+S  +    G+ L  + 
Sbjct: 348 LVSSNGGAQHIAKQDLETGAVQVLTDTFLDETPSIAPNGTMVIYSSTQG--LGAVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKFPAWSPYL 430


>gi|257487004|ref|ZP_05641045.1| translocation protein TolB [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289626502|ref|ZP_06459456.1| translocation protein TolB [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289650948|ref|ZP_06482291.1| translocation protein TolB [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|298488203|ref|ZP_07006239.1| beta propeller repeat-containing TolB protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|298157261|gb|EFH98345.1| beta propeller repeat-containing TolB protein [Pseudomonas
           savastanoi pv. savastanoi NCPPB 3335]
 gi|320323046|gb|EFW79135.1| translocation protein TolB [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320329682|gb|EFW85671.1| translocation protein TolB [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330868618|gb|EGH03327.1| translocation protein TolB [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330877973|gb|EGH12122.1| translocation protein TolB [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330892246|gb|EGH24907.1| translocation protein TolB [Pseudomonas syringae pv. mori str.
           301020]
 gi|330988975|gb|EGH87078.1| translocation protein TolB [Pseudomonas syringae pv. lachrymans
           str. M301315]
 gi|331009354|gb|EGH89410.1| translocation protein TolB [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 433

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 111/441 (25%), Positives = 213/441 (48%), Gaps = 15/441 (3%)

Query: 14  KINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            INL   L+++  F    + A    + V + S   +P+++    +   + L   ++E+VS
Sbjct: 1   MINLFRGLLVVLCFASAMVSAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIVS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L
Sbjct: 61  NDLRNSGYYAPIPKQNMISLPTQASEVI-FRDWKALGAQYVMVGNITPAG-GRLQIQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFF 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D S + F SDR GK Q+Y    NG   +R++     +  +P  S     +        
Sbjct: 296 GKDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F + V        ++L + +  ++PT +P+G  +I++ ++ G     L  + +NGR 
Sbjct: 355 FTNFKVAVQDLARGSVKILTDSNLDESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|319786285|ref|YP_004145760.1| Tol-Pal system beta propeller repeat protein TolB
           [Pseudoxanthomonas suwonensis 11-1]
 gi|317464797|gb|ADV26529.1| Tol-Pal system beta propeller repeat protein TolB
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 462

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 122/449 (27%), Positives = 216/449 (48%), Gaps = 16/449 (3%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTK--FVSIDE 60
            + + L MK +L    +L     P    A    +++     N S + IA     +     
Sbjct: 17  RMPKSLPMKASLRWFFLLACLLIPGLAAAQQQGLEIDIIGGNASALPIAVVPMPYEGGGG 76

Query: 61  LGG-KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
                V++VV  DL RS  F  + +    ++ T    I  +  W  L    LV GRV+  
Sbjct: 77  APQTDVAKVVRDDLARSGQFRTLPEAQMVERPTRGGEI-NYPTWRQLRQDYLVVGRVLDA 135

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           G+   RVE+ L+DV   ++++G    +  ++ R +AH I+D IY+ I G +G F +RI +
Sbjct: 136 GEGGYRVEYELFDVGRGERLLGLAMTARASAMRDVAHQIADAIYEKILGVRGAFWTRIAY 195

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V+ +     ++ +L V D DG N + +  S +  L  P +SP+ +K+AY +++  +   +
Sbjct: 196 VTANGSGSGMRYALVVADSDGWNPQVVVRSAEP-LLSPAWSPDGRKLAYVSFERGNS-SI 253

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y+ D     A + + +FR +  AP FS +G+R  +S+ +    +IY +DL S    +LTN
Sbjct: 254 YIQDIATG-ARELVSSFRGINSAPSFSPDGRRLALSLSRSGNPEIYVMDLGSKQLTQLTN 312

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              I+   ++S D S I F SDR G+ Q+Y + S+G    R++     +    V S  G 
Sbjct: 313 HFGIDTEPTWSADGSTIYFTSDRGGRPQIYQVPSSGGAASRVTFQGNYNATATV-SHDGK 371

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            IA  + SG  + I +M       R   +   S  ++P+++P+G  LI++ ++ G     
Sbjct: 372 KIAMAQGSGNTYRIAMMDTSLGSPRWSTISTGSLDESPSFAPNGSMLIYAAREGGRG--V 429

Query: 418 LYSIDLNGR-NETLINTPAYASDPQWVGF 445
           LY++  + R  + L+       +P W  +
Sbjct: 430 LYAVSADARVRQRLVLADGDVREPAWSPY 458


>gi|269963138|ref|ZP_06177473.1| translocation protein TolB precursor [Vibrio harveyi 1DA3]
 gi|269832102|gb|EEZ86226.1| translocation protein TolB precursor [Vibrio harveyi 1DA3]
          Length = 450

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 106/458 (23%), Positives = 198/458 (43%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L L + ++ G   +  HA +++       +  P+++   K+   + L   +S V++
Sbjct: 1   MIKRLLLGMFVLLGSLTSVAHAALELVITDGIDSARPIAVVPFKWEGSEPLPTDISAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ +      Q   N   +  F  W  LG   L+TG + K  +    V ++L
Sbjct: 61  SDLQRSGKFSPVPTSKMPQTPFNESEV-NFDAWTGLGVDALLTGSIKKNEQGNYVVNYQL 119

Query: 131 WDVKDRKQ---------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            DV   +                      +  K         R+ AH ISD +Y+ +TGE
Sbjct: 120 VDVVRGQLTGGNSKALGGDGELVLSKDHVLFNKVATVEGPRMREYAHRISDLVYEQLTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V  +         L V D DG N R +  S+ Q L  P +SP+ QK+AY 
Sbjct: 180 RGAFMTRIAYVVVN-DKDNFPYQLRVADYDGYNERLVLQSK-QPLMSPAWSPDGQKLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +++M+       +++ ++     APRFS +G +  + + K  ++ +Y++DL
Sbjct: 238 SFQNGQA-EIFIMNIYTGE-REKVTSYPRHNGAPRFSPDGSQLALVLSKTGSLQVYTLDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           ++    ++T     N    + PD   ++F SDR GK Q+Y +        R++     + 
Sbjct: 296 KTRKLTQITRGRSNNTEPYWHPDGKSLIFTSDRGGKPQIYKVDLGSGSTNRLTWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S  
Sbjct: 356 GGQ-ITPDGRFLVMVNRSDSGFNLAKQDLETGALQVLTKTLLDESPSIAPNGGMVIYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +      L  + ++GR +  L  T      P W  F+
Sbjct: 415 YNKKN--VLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|157803974|ref|YP_001492523.1| translocation protein TolB [Rickettsia canadensis str. McKiel]
 gi|166229988|sp|A8EZF5|TOLB_RICCK RecName: Full=Protein tolB; Flags: Precursor
 gi|157785237|gb|ABV73738.1| hypothetical protein A1E_04055 [Rickettsia canadensis str. McKiel]
          Length = 444

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 159/445 (35%), Positives = 245/445 (55%), Gaps = 21/445 (4%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE----LGGKVSEVVSKDLQR 75
           ++  I   F  + +A   +        P  IA  KF +       +G  V +V+S DL+ 
Sbjct: 4   IIYFILLLFSCTGYALETINIECGRADPTPIAVNKFDADTSTNNIVGHDVVKVISNDLKL 63

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F+ IS  SF +  T  +  P F  W  + A +LV G V K    +L++ F LWD   
Sbjct: 64  SGLFHPISSASFIEDKTGIEDKPLFAAWRQINASLLVNGEVKKLESGKLKISFILWDTLL 123

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            KQ++G+        WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + +
Sbjct: 124 EKQLVGEILEVPENLWRRAAHKIADKIYEKITGDAGYFDTKIVYVSESSSLPKIK-RIAL 182

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD DGAN +YLT     ++  PRF+ +  K+ Y +Y  +    +Y  D +  +    + +
Sbjct: 183 MDYDGANNKYLTNGTS-LVLTPRFARSVDKIFYVSYATKRRALIYEKDLKTGKES-IVSD 240

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F  +  APRFS +G++A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  +
Sbjct: 241 FAGISFAPRFSPDGRKAVMSIAKNGSTHIYEIDLATKQLHKLTDGFGINTSPSYSPDGKK 300

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK----- 370
           IV+ SDR G  QLY+M S+GS+ KRIS     SY  P WSP+GD IAFTK +  +     
Sbjct: 301 IVYNSDRNGVPQLYIMNSDGSNVKRISFGG-GSYAAPSWSPRGDYIAFTKITRGEDGSKT 359

Query: 371 FAIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSID 422
           F IG+MK     D + ER++     +++P WSP+GR ++F+     +      +K+++ID
Sbjct: 360 FNIGIMKAYPQDDENSERIITSGYLVESPCWSPNGRVIMFAKGWPSRAKVPGKNKIFAID 419

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
           L G NE  I TP  ASDP+W   ++
Sbjct: 420 LTGHNEREIITPEDASDPEWSMVLN 444


>gi|66044663|ref|YP_234504.1| translocation protein TolB [Pseudomonas syringae pv. syringae
           B728a]
 gi|75502949|sp|Q4ZWK6|TOLB_PSEU2 RecName: Full=Protein tolB; Flags: Precursor
 gi|63255370|gb|AAY36466.1| TolB, N-terminal:TolB, N-terminal [Pseudomonas syringae pv.
           syringae B728a]
 gi|330968885|gb|EGH68951.1| translocation protein TolB [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 433

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 110/441 (24%), Positives = 212/441 (48%), Gaps = 15/441 (3%)

Query: 14  KINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            INL   L+++  F    + A    + V + S   +P+++    +     L   ++E++S
Sbjct: 1   MINLFRGLLVVLCFASAMVSAEEKNILVTSGSDRAAPIAVVPFGWQGGSVLPEDMAEIIS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L
Sbjct: 61  NDLRNSGYYAPIPKQNMISLPTQASEVI-FRDWKALGAQYVMVGNITPAG-GRLQIQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFF 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D S + F SDR GK Q+Y    NG   +R++     +  +P  S     +        
Sbjct: 296 GKDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F + V        ++L + +  ++PT +P+G  +I++ ++ G     L  + +NGR 
Sbjct: 355 FTNFKVAVQDLARGSVKILTDSNLDESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|126733593|ref|ZP_01749340.1| translocation protein TolB precursor [Roseobacter sp. CCS2]
 gi|126716459|gb|EBA13323.1| translocation protein TolB precursor [Roseobacter sp. CCS2]
          Length = 438

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 155/421 (36%), Positives = 238/421 (56%), Gaps = 10/421 (2%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGG----KVSEVVSKDLQRSDVFNLISQDS 86
           + +  +++        P++ A   F +           +S +V +DL  + +F  +   +
Sbjct: 20  AQNGPLRLTITDGVIEPITFAVPSFEAESPAAQQAASDISRLVVQDLAGTGLFREVPATA 79

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII-GKKFF 145
           F  ++++      F DW ++ AQ L+ G V   G ++L V+FRL+DV   +++  G +F 
Sbjct: 80  FISQVSSFVQPVAFPDWRAINAQALIVGAVNVNG-NQLSVKFRLYDVFSGQELGQGLQFA 138

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
            +   WR++ H +SD +Y  ITGE G F+SR++FVSES      +  L +MD DGAN+++
Sbjct: 139 GTVDGWRRMGHKVSDAVYSRITGEGGYFDSRVVFVSESGPKDNRQKRLAIMDFDGANVQF 198

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           LT S   I+  PRFSPN  +V Y +++     R+ +++       +       M  +PRF
Sbjct: 199 LTDSSS-IVLAPRFSPNGDRVLYTSFESG-FPRINVLNVANVGRQQLQTAPGEMAFSPRF 256

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G++ + S+      DIY  DL +    RLT+   I  + S SPD SQIVFESDR G 
Sbjct: 257 SRDGRQVIYSLSNGGNTDIYRTDLSTGQHVRLTSAPSIETAPSLSPDGSQIVFESDRSGN 316

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +QLYVM +NG + +RIS   +  Y  PVWSP+GDL+AFTK +  +F IGVM+ DGS+ERL
Sbjct: 317 QQLYVMSANGGEARRISF-GQGRYGTPVWSPRGDLVAFTKQNAGRFHIGVMRIDGSEERL 375

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQWVG 444
           L      + PTWSP+GR ++FSR+  G  G S +YS+D++GRN   +     ASDP W  
Sbjct: 376 LTSSFLDEGPTWSPNGRVIMFSRETQGAGGTSSMYSVDISGRNLKAVPLQGGASDPSWGP 435

Query: 445 F 445
            
Sbjct: 436 L 436


>gi|330872647|gb|EGH06796.1| translocation protein TolB [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 433

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 108/441 (24%), Positives = 211/441 (47%), Gaps = 13/441 (2%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +N+   L ++L    G         + V + S   +P+++    +   + L   ++E++S
Sbjct: 2   INLFRGLLVVLCFASGMVAAEEK-NILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIIS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L
Sbjct: 61  NDLRNSGYYAPIPKQNMISLPTQASEVI-FRDWKALGAQYVMVGNITPAG-GRLQIQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQQVLNGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFF 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D S + F SDR GK Q+Y    NG   +R++     +  +P  S     +        
Sbjct: 296 GKDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F + V        ++L + +  ++PT +P+G  +I++ ++ G     L  + +NGR 
Sbjct: 355 FTNFKVAVQDLARGSVKILTDSNLDESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|209695365|ref|YP_002263294.1| translocation protein TolB [Aliivibrio salmonicida LFI1238]
 gi|226705863|sp|B6EGK3|TOLB_ALISL RecName: Full=Protein tolB; Flags: Precursor
 gi|208009317|emb|CAQ79583.1| TolB protein precursor, periplasmic component [Aliivibrio
           salmonicida LFI1238]
          Length = 450

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 113/458 (24%), Positives = 199/458 (43%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M     L L +    F     A +++       +  P+ I   K+    +L   +S ++S
Sbjct: 1   MLKRWILPLFIACLSFSQIAKAELELVITEGVNSARPIGIVPFKWHGEGKLPQDISAIIS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ +  +   Q     D+   ++ W  +G   +VTG V      +  V ++L
Sbjct: 61  SDLQRSGKFSPLPTNKMPQTPYK-DADINYEAWTKMGVDAIVTGEVKVNAAGKYEVSYKL 119

Query: 131 WDVKDRKQIIGKK---------------------FFSSPASWRKIAHTISDDIYQSITGE 169
            DV   +   GK                         S    RK AH ISD +Y+ +TGE
Sbjct: 120 IDVVRGQLTKGKSKGLSNSGELVLTQDHILVNKIATLSKTQLRKYAHRISDVVYEKLTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           KG F +RI +V  +  S      L + D DG N R +  S+  I   P +SP+ +K+AY 
Sbjct: 180 KGAFLTRIAYVVVNDKS-QHPYQLRIADYDGYNERLVLKSKQPI-MSPAWSPDGKKLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++++    +V++M+    +  + I ++     APRFS +GK   I + K  ++ +Y V+L
Sbjct: 238 SFENRRS-QVFIMNIYTGK-RELIASYPRHNGAPRFSHDGKELAIVLSKTGSLQVYIVNL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           Q+    ++T     N    ++PD+  ++F SDR GK Q+Y +       KR++     + 
Sbjct: 296 QTKKMRQITRGRSNNTEPFWAPDNKSLIFTSDRGGKPQIYRVNLEDGSTKRLTWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  I     S   F +     +    ++L +    ++P+ +P+G  +I+S  
Sbjct: 356 GGQ-ITPDGKYIVMVNRSETGFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGMVIYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
                 + L  + ++GR +  L  T      P W  F+
Sbjct: 415 Y--RKQNVLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|329848730|ref|ZP_08263758.1| tol-Pal system beta propeller repeat protein TolB [Asticcacaulis
           biprosthecum C19]
 gi|328843793|gb|EGF93362.1| tol-Pal system beta propeller repeat protein TolB [Asticcacaulis
           biprosthecum C19]
          Length = 449

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 152/430 (35%), Positives = 235/430 (54%), Gaps = 8/430 (1%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFT---KFVSIDELGGKVSEVVSKDLQRSD 77
           L  + G         ++   + A+  P++IA        S + +G ++++VV  DLQ S 
Sbjct: 23  LTAMAGSVAAQSQGPLRGTVDEADVQPLAIAIMISGTDPSGNTIGEQLTKVVINDLQSSG 82

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F  I   +F +   + +S P +++W ++ AQ L  GR       +++ + R+WD+  +K
Sbjct: 83  YFAPIDPRAFIETSLDVNSPPTWENWTAINAQFLANGRAYINANGQVQADVRVWDIYSQK 142

Query: 138 QII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +   G     +P  WR++AH  +D IY+ +TGEKG F++RI FV+ES   G     L +M
Sbjct: 143 EAFPGAGHMITPEQWRRLAHKHADAIYERLTGEKGYFDTRIAFVAESGKRGDRVKRLAMM 202

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+DGAN +YL       +  PRFS +  ++AY      D  R++L D    R  +++   
Sbjct: 203 DQDGANPQYLAVEGSGKIITPRFSADGTEIAYMALSA-DSARIFLYDLEA-RRGEQVAQV 260

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           R M  APR+S +G +   SV +    DIY  +L + +  RLT+   I+ S S+S D S+I
Sbjct: 261 RGMAFAPRYSPDGTKLAFSVSQGANSDIYVTNLNTRSLSRLTSDPAIDTSPSFSADGSRI 320

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            F SDR G  Q+YVM ++GS  +RI+      Y  PV+SP+GDLIAFTK S  +F+IGVM
Sbjct: 321 AFTSDRGGSPQIYVMGADGSGARRITFGG-GLYSTPVFSPKGDLIAFTKQSKGRFSIGVM 379

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             DGS ERLL      + PTW+P+GR ++F R+  G     L+ +++NGR E  +     
Sbjct: 380 NPDGSGERLLTSSYLEEGPTWAPNGRYIMFFREPPGGM-PSLWMVEVNGRIERPVPYTGG 438

Query: 437 ASDPQWVGFM 446
           ASDP W   +
Sbjct: 439 ASDPAWSPLL 448


>gi|86146493|ref|ZP_01064816.1| translocation protein TolB precursor [Vibrio sp. MED222]
 gi|218709110|ref|YP_002416731.1| translocation protein TolB [Vibrio splendidus LGP32]
 gi|254764845|sp|B7VMJ2|TOLB_VIBSL RecName: Full=Protein tolB; Flags: Precursor
 gi|85835756|gb|EAQ53891.1| translocation protein TolB precursor [Vibrio sp. MED222]
 gi|218322129|emb|CAV18243.1| Protein tolB precursor [Vibrio splendidus LGP32]
          Length = 450

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 109/458 (23%), Positives = 200/458 (43%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L L  V +        HA +++       +  P++I   ++     L   VS V++
Sbjct: 1   MLKKLLLSFVFLIATSSQFAHAALELVITDGINSARPIAIVPFRWEGAGPLPHDVSAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ ++     Q   +   +  F  W +LG   L+TG + K  + +  V ++L
Sbjct: 61  SDLQRSGKFSPVATSKMPQTPYSETEV-NFDAWTNLGVDSLLTGSITKNAEGQYVVNYQL 119

Query: 131 WDVKDRKQ---------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            D+   +                      +  KK        R+ AH ISD +Y+ +TGE
Sbjct: 120 IDIVRGQLTKGQSRALSDEGQLVLSKDHVLFNKKATVPGKRLREYAHRISDLVYEELTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           KG F +RI +V  +         L V D DG N R +  S+ Q L  P +SP+ +K+AY 
Sbjct: 180 KGAFLTRISYVVVN-DKDKYPYQLRVADYDGFNERLVLRSK-QPLMSPAWSPDGKKLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +++M+       +++ ++     APRFS +GK   + + K  ++ +Y++DL
Sbjct: 238 SFQNGQA-EIFIMNIYTGE-REKVTSYPRHNGAPRFSPDGKTLALVLSKTGSLQVYTLDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            S    ++T     N    + PD   ++F SDR GK Q+Y +  + +   RI+     + 
Sbjct: 296 ASRKLTQITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYNVNLSNNSTSRITWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S  
Sbjct: 356 GGQ-ITPDGRFLIMVNRSNSGFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGMVIYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +    + L  + ++GR +  L  T      P W  F+
Sbjct: 415 YN--KTNVLSMVSIDGRFKARLPATNGRVRAPSWSPFL 450


>gi|238920738|ref|YP_002934253.1| translocation protein TolB [Edwardsiella ictaluri 93-146]
 gi|259533853|sp|C5BEL8|TOLB_EDWI9 RecName: Full=Protein tolB; Flags: Precursor
 gi|238870307|gb|ACR70018.1| Tol-Pal system beta propeller repeat protein TolB, putative
           [Edwardsiella ictaluri 93-146]
          Length = 430

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 101/432 (23%), Positives = 199/432 (46%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           L+V +   + + +HA V++       +  P+ +   K++        +  +++ DL+ S 
Sbjct: 7   LMVGLLVLWASVLHAEVRIVITQGVDSARPIGVVPFKWMGPGTAPENIGGIIAADLRNSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-- 135
            FN I      Q+ +    +     W +LG   +V G+V         V ++L D     
Sbjct: 67  KFNPIDASRMPQQPSAAAEVS-PAAWTALGIDAVVVGQVQPGADGSYLVSYQLVDTSGNP 125

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              ++  ++  +    R  AHT SD++++ +TG KG F +RI +V ++   G     L V
Sbjct: 126 GSVLVQNQYKVTGQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRV 184

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N +++     + L  P +SP+  K+AY T++        ++ T  + A +++ +
Sbjct: 185 ADYDGYN-QFVVHRSAEPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLSNGAIRQVAS 241

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F     +P FS +G +   ++ K  ++++Y +DL S A  ++T+    N   ++ PDS  
Sbjct: 242 FPRHNGSPAFSPDGSKLAFALSKTGSLNLYVMDLASGAIRQVTDGRSNNTEPTWFPDSQN 301

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + F SD+ G+ Q+Y M  NG   +R++ +   +    V SP G  +     S     I  
Sbjct: 302 LAFTSDQAGRPQIYKMNINGGVAQRLTWEGSQNQDAEV-SPDGKFLVMVSSSAGAQHIAK 360

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTP 434
           +    +  ++L +    + P+ +P+G  +I+S  +    GS L  + ++GR +  L  T 
Sbjct: 361 LDLGTNATQVLTDTFLDETPSIAPNGTMVIYSSTQG--LGSVLQLVSIDGRFKARLPATD 418

Query: 435 AYASDPQWVGFM 446
                P W  ++
Sbjct: 419 GQVKFPAWSPYL 430


>gi|330964830|gb|EGH65090.1| translocation protein TolB [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 433

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 108/441 (24%), Positives = 211/441 (47%), Gaps = 13/441 (2%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +N+   L ++L    G         + V + S   +P+++    +   + L   ++E++S
Sbjct: 2   INLFRGLLVVLCFASGMVAAEEK-NILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIIS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L
Sbjct: 61  NDLRNSGYYAPIPKQNMISLPTQASEVI-FRDWKALGAQYVMVGNITPAG-GRLQIQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFF 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D S + F SDR GK Q+Y    NG   +R++     +  +P  S     +        
Sbjct: 296 GKDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F + V        ++L + +  ++PT +P+G  +I++ ++ G     L  + +NGR 
Sbjct: 355 FTNFKVAVQDLARGSVKILTDSNLDESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|293397222|ref|ZP_06641495.1| tol-Pal system beta propeller repeat protein TolB [Serratia
           odorifera DSM 4582]
 gi|291420242|gb|EFE93498.1| tol-Pal system beta propeller repeat protein TolB [Serratia
           odorifera DSM 4582]
          Length = 430

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 101/445 (22%), Positives = 195/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +   +L       + + +HA V++       +  P+ +   K+         
Sbjct: 1   MKQAFRVALGFLIL-------WASVLHAEVRIEITQGVDSARPIGVVPFKWAGPGTPPED 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           V ++V+ DL+ S  FN I      Q+ T    +     W +LG   +V G+V        
Sbjct: 54  VGKIVAADLRNSGKFNPIDAARMPQQPTTASEV-TPAAWTALGIDAVVVGQVQPGADGGY 112

Query: 125 RVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D        +   ++  +    R  AHT SD++++ +TG KG F +RI +V +
Sbjct: 113 LVSYQLVDTSGSPGTVLAQNQYKVTKQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G     L V D DG N +++     Q L  P +SP+  K+AY T++        ++
Sbjct: 173 TN-GGKFPYELRVADYDGYN-QFVVHRSPQPLMSPTWSPDGSKLAYVTFESGR--SALVV 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A ++I +F     AP FS +G R   ++ K  ++++Y ++L S    +LT+   
Sbjct: 229 QTLSNGAIRQIASFPRHNGAPAFSPDGSRLAFALSKSGSLNLYVMNLGSGQITQLTDGRS 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N   ++ PD   + F SD+ G+ Q+Y + ++G   +R++ +   +    V S  G  + 
Sbjct: 289 NNTEPTWFPDGQSLAFTSDQGGRPQIYKISASGGAAQRLTWEGGQNQDSEV-SADGKFLV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +     I          ++L +    + P+ +P+G  +I+S  +    GS L  + 
Sbjct: 348 MVTTNNGVQHIAKQDLGSGAVQVLTDTFLDETPSIAPNGTMVIYSSTQG--MGSVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKFPAWSPYL 430


>gi|54309711|ref|YP_130731.1| translocation protein TolB [Photobacterium profundum SS9]
 gi|67461961|sp|Q6LP47|TOLB_PHOPR RecName: Full=Protein tolB; Flags: Precursor
 gi|46914149|emb|CAG20929.1| putative TolB protein [Photobacterium profundum SS9]
          Length = 449

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 116/469 (24%), Positives = 207/469 (44%), Gaps = 43/469 (9%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSI 58
           M  R+ +         LC+ L+     F     A +++       +  P+ I    +   
Sbjct: 1   MMKRWMM--------GLCIALLS----FSQIAQAELELVITEGIDSARPIGIIPFTWEGE 48

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
            +L   +S V++ DLQRS  F+ I+     Q   + + I  ++ W ++G   LVTG+V K
Sbjct: 49  GKLPTDISSVIASDLQRSGKFSPIATSKMPQTPDSEEQI-DYRAWTAMGVDALVTGKVTK 107

Query: 119 EGKDRLRVEFRLWDVKDRKQ--------------------IIGKKFFSSPASWRKIAHTI 158
             +    V ++L DV   +                     ++  +        R+ AH I
Sbjct: 108 NAEGNYVVNYQLVDVVRGQLTSGESRGLANGELVLTKDHLLVNNRAIVKETRLRQYAHRI 167

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           SD +Y+++TGE+G F +RI +V     S      L V D DG N R +  SR Q L  P 
Sbjct: 168 SDVVYEALTGEQGAFLTRIAYVVIDDKS-KHPYQLRVADYDGFNERLVLKSR-QPLMSPA 225

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+  K+AY +++++   ++Y+MD       + + ++     +PRFS +GK+  + + K
Sbjct: 226 WSPDGSKLAYVSFENQQA-QIYIMDIYKGT-RELVTSYPRHNGSPRFSPDGKKLALVLSK 283

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             ++ IY  DL++    ++T+    N  A + PD   ++F SDR G+ Q+Y +    +  
Sbjct: 284 TGSLQIYIKDLKTKKLTQITSGRANNTEAFWDPDGKSLIFTSDRGGQPQIYRVNLADNST 343

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           KR++     +      +P G  +     S   F I          ++L +    ++P+ +
Sbjct: 344 KRLTWQGSQNLGGQ-LTPDGRYLVMVNRSDTGFNIAKQDLKTGAVQILTKTFLDESPSIA 402

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           P+G  +I+S   +      L SID  GR +  L  T      P W  F+
Sbjct: 403 PNGGMVIYSSVNNKSNELSLVSID--GRFKARLPTTNGRVRAPSWGPFL 449


>gi|59711569|ref|YP_204345.1| translocation protein TolB [Vibrio fischeri ES114]
 gi|67461862|sp|Q5E689|TOLB_VIBF1 RecName: Full=Protein tolB; Flags: Precursor
 gi|59479670|gb|AAW85457.1| periplasmic protein TolB [Vibrio fischeri ES114]
          Length = 450

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 110/458 (24%), Positives = 202/458 (44%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M     L L ++   F     A +++       +  P+ I   K+    +L   +S ++S
Sbjct: 1   MLKRWILTLFVVCLGFSQVAKAELELVITEGIDSARPIGIVPFKWHGEGKLPQDISAIIS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ ++ +   Q     DS   ++ W  +G   +VTG V    + +  V ++L
Sbjct: 61  SDLQRSGKFSPVATNKMPQTPYK-DSDINYEAWTKMGVDAIVTGEVKLNAQGKYEVTYKL 119

Query: 131 WDVKDRKQ---------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            DV   +                      ++ K    S    RK AH ISD +Y+ +TGE
Sbjct: 120 IDVVRGQLTKGQSKALDESGKLVLTRDHILVNKVASLSTKQLRKYAHRISDVVYEKLTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V  +         L + D DG N R +  S+  I   P +SP+ +K+AY 
Sbjct: 180 RGAFLTRIAYVVVN-DKAQYPYQLRIADYDGYNERLVLKSKQPI-MSPAWSPDGKKLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++++    ++++M+    +  + I ++     APRFS +G +  I + K  ++ IY VDL
Sbjct: 238 SFENRKS-QIFIMNIYTGK-RELIASYPRHNGAPRFSHDGDKLAIVLSKSGSLQIYVVDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           ++    ++T     N    ++PD+  ++F SDR GK Q+Y +       KR++     + 
Sbjct: 296 KTKKMSQITRGRANNTEPFWAPDNKSLIFTSDRGGKPQIYRVNLGDGSTKRLTWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  I     S   F +     +    ++L +    ++P+ +P+G  +I+S  
Sbjct: 356 GGQ-ITPDGKYIVMVNRSETGFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGMVIYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
                 + L  + ++GR +  L  T      P W  F+
Sbjct: 415 Y--RKQNVLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|71737813|ref|YP_275907.1| translocation protein TolB [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|119371049|sp|Q48FD0|TOLB_PSE14 RecName: Full=Protein tolB; Flags: Precursor
 gi|71558366|gb|AAZ37577.1| tolB protein [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 433

 Score =  395 bits (1015), Expect = e-108,   Method: Composition-based stats.
 Identities = 112/441 (25%), Positives = 213/441 (48%), Gaps = 15/441 (3%)

Query: 14  KINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            INL   L+++  F    + A    + V + S   +P+++    +   + L   ++E+VS
Sbjct: 1   MINLFRGLLVVLCFASAMVSAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIVS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L
Sbjct: 61  NDLRNSGYYAPIPKQNMISLPTQASEVI-FRDWKALGAQYVMVGNITPAG-GRLQIQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFF 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D S + F SDR GK Q+Y    NG   +R+S     +  +P  S     +        
Sbjct: 296 GKDGSTLYFTSDRGGKPQIYKTNINGGGAERVSFVGNYNA-NPKLSADEKTLVMIHRQDG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F + V        ++L + +  ++PT +P+G  +I++ ++ G     L  + +NGR 
Sbjct: 355 FTNFKVAVQDLARGSVKILTDSNLDESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|254294750|ref|YP_003060773.1| Tol-Pal system beta propeller repeat protein TolB [Hirschia baltica
           ATCC 49814]
 gi|254043281|gb|ACT60076.1| Tol-Pal system beta propeller repeat protein TolB [Hirschia baltica
           ATCC 49814]
          Length = 454

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 163/439 (37%), Positives = 237/439 (53%), Gaps = 25/439 (5%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSIDE----LGGKVSEVVSKDLQRSDVFNLISQ 84
           P        V      +  + +A   F         +G  +++V+  DL  S +F +IS 
Sbjct: 19  PAYAQDENVVNITKGTFEAMPMAIPDFSGDTTEAATVGSDIAQVIRNDLAGSGLFRMISP 78

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
           D+F +K  +   +P F DW  + A  L+ G+ I +    +  +FRL+DV   KQ+  +++
Sbjct: 79  DAFVEKNLDIAVLPTFADWKVINADALLVGKTIIDPTGSMATQFRLFDVFTGKQLYSQEY 138

Query: 145 FSS-PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
             S   SWR++AH I+DDIY+ +T + G F+SRI+++ ES         L +MD+DGAN 
Sbjct: 139 TVSSRDSWRRMAHIIADDIYEQLTPDSGYFDSRIVYIDESGPKTKRVRRLAIMDQDGANP 198

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDE------DILRVYLMDTRIDRAPKRIGNFR 257
             LT  R ++   PRF P+ Q + Y     +      +  RVYL D    R  + IG++ 
Sbjct: 199 ENLTDGRIEV-QTPRFDPSSQTIIYTALVPDARNPLLERRRVYLFDIETGRQ-EVIGDYG 256

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               A RF+ +G    +S+ +D   DIY +DL      RLTN L I+ S SYSPD  +IV
Sbjct: 257 LTSFAARFAPDGNSVAMSLAEDGNSDIYILDLARRQRTRLTNNLAIDTSPSYSPDGKEIV 316

Query: 318 FESDREGKEQLYVMQSNGSDQK----------RISQDKEASYFDPVWSPQGDLIAFTKFS 367
           F SDR G  QLY+M ++GSD+           RI+   + SY  PVWSP+GDLIAFTK S
Sbjct: 317 FTSDRGGSPQLYIMNADGSDRNCENGPRNKVCRITF-GQGSYSTPVWSPRGDLIAFTKQS 375

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +F IGV+K DG+ ER L  D  ++ PTWSP+GR +IF ++  G     L+SIDL+GRN
Sbjct: 376 KGRFEIGVIKTDGTGERSLTSDYLVEGPTWSPNGRVIIFFKEARGGR-PSLWSIDLSGRN 434

Query: 428 ETLINTPAYASDPQWVGFM 446
              + T   ASDP W   +
Sbjct: 435 LKRVPTRGDASDPAWSPVL 453


>gi|89075797|ref|ZP_01162185.1| translocation protein TolB precursor [Photobacterium sp. SKA34]
 gi|89048529|gb|EAR54104.1| translocation protein TolB precursor [Photobacterium sp. SKA34]
          Length = 442

 Score =  395 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 111/451 (24%), Positives = 207/451 (45%), Gaps = 27/451 (5%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVV 69
              + LCL L+ +  F     HA +++       +  P+ +   ++    +L   +S V+
Sbjct: 3   RWIMGLCLALLSVSQF----AHAELELVITDGVDSARPIGVVPFQWEGEGKLPTDISAVI 58

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           + DLQRS  F+ + +    Q   N   I  +  W+ +G   +VTG ++K       V ++
Sbjct: 59  ASDLQRSGKFSPVPESKLPQLPHNESQI-DYSAWSKMGVDAVVTGTIVKNQDGNYTVNYQ 117

Query: 130 LWDVKDRKQ-------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
           L D+   K              ++  +    P   R+ AH ISD IYQ +TGE+G F +R
Sbjct: 118 LVDIVKGKLAAGTEGAAKGDYLLLNNQASVKPNRMRQYAHRISDLIYQKLTGERGAFLTR 177

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I +V  +  S      L V D DG N R +  S+ Q L  P +SP+  K+AY +++    
Sbjct: 178 IAYVDNNRSS-KFPYQLRVADYDGYNERVVLKSK-QPLMSPAWSPDGSKLAYVSFESGKA 235

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            ++Y++D       + + N+     +P+FS +G +  + + +  ++ IY  DL++    +
Sbjct: 236 -QIYVLDIYKGT-REVVANYPRHNGSPQFSPDGTKLAMVLSESGSLQIYIKDLKTKQLRQ 293

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT+    N  A ++PD   + F SDR G+ Q+Y +     D +R++     +   P  +P
Sbjct: 294 LTHGRANNTEAVWAPDGQSLYFTSDRGGRPQVYHLDLATGDTQRVTWQGAQN-MGPQITP 352

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +     S   + I          ++L +    ++P+ +P+G  +I+S  ++  T  
Sbjct: 353 DGRYLVVVNRSDSGYNIAKQDLKTGAMQILTKARLAESPSIAPNGSMIIYSSAQNSGT-Y 411

Query: 417 KLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           +L  + ++GR +  L +T      P W  F+
Sbjct: 412 ELSLVSIDGRFQARLPSTSKRVRAPSWGPFL 442


>gi|238785869|ref|ZP_04629837.1| hypothetical protein yberc0001_38250 [Yersinia bercovieri ATCC
           43970]
 gi|238713239|gb|EEQ05283.1| hypothetical protein yberc0001_38250 [Yersinia bercovieri ATCC
           43970]
          Length = 430

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 198/445 (44%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +   +L       + + +HA V++       +  P+ +   K++       +
Sbjct: 1   MKQAFRVALGFLVL-------WASVLHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEE 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V  DL+ S  FN I      Q+ +    +     W +LG   +V G+V        
Sbjct: 54  IGAIVGADLRNSGKFNPIDAARMPQQPSTAAEV-TPAAWTALGIDAVVVGQVQPSADGSY 112

Query: 125 RVEFRLWDV--KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D        +   ++  +    R  AHT SD++++ +TG KG F +RI +V +
Sbjct: 113 VVSYQLVDTSGAAGSVLAQNQYKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G   + L V D DG N +++     + L  P +SP+  K+AY T++        ++
Sbjct: 173 TN-GGKFPHELRVSDYDGYN-QFVVHRSPEPLMSPAWSPDGSKIAYVTFESGK--SALVI 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+   
Sbjct: 229 QTLANGAIRQVASFPRHNGAPAFSPDGTKLAFALSKSGSLNLYVMDLASGQISQVTDGRS 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N   S+ PDS  + + SD+ G+ Q+Y +  NG   +RI+ +   +    V SP G  + 
Sbjct: 289 NNTEPSWFPDSQNLAYTSDQGGRPQVYKVNINGGAPQRITWEGSQNQNADV-SPDGKFLV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +G    I          ++L +    + P+ +P+G  +I+S  +    G+ L  + 
Sbjct: 348 LVSSNGGAQHIAKQDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSTQG--LGAVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKFPAWSPYL 430


>gi|323496600|ref|ZP_08101653.1| translocation protein TolB [Vibrio sinaloensis DSM 21326]
 gi|323318346|gb|EGA71304.1| translocation protein TolB [Vibrio sinaloensis DSM 21326]
          Length = 439

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 102/446 (22%), Positives = 195/446 (43%), Gaps = 29/446 (6%)

Query: 23  LIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLI 82
           ++  F   +    + +     +  P++I   K+    +L   VS +++ DLQRS  F+ +
Sbjct: 1   MMSAFQVANAALELVITDGIDSARPIAIVPFKWEGTSKLPQDVSAIIASDLQRSGKFSPV 60

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ---- 138
                 Q   N   +  F  W  LG   L+TG + +  +    + ++L DV   +     
Sbjct: 61  PTSKMPQTPYNETEV-NFDAWTGLGVDALLTGTITQNAEGNYVINYQLVDVIRGQLTQGQ 119

Query: 139 -----------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                            +  K+        R+ AH ISD +YQ +TGE+G F +RI +V 
Sbjct: 120 SKALSTDGQLVLSKDHVLFNKRATVPGERLREYAHRISDLVYQELTGERGAFLTRIAYVV 179

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +         L V D DG N R +  S+ Q L  P +SP+ QK+AY ++ +     +++
Sbjct: 180 VNDKDKKYPYQLRVSDYDGYNERLVLRSK-QPLMSPAWSPDGQKLAYVSFQNGQA-EIFI 237

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           M+       +++ ++     APRFS +G    + + K  ++ +Y++DL++    ++T   
Sbjct: 238 MNIYTGEQ-EKVTSYPRHNGAPRFSPDGNTLALVLSKTGSLQVYTLDLKTRKLTQITRGR 296

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             N    + PD   ++F SDR G+ Q+Y +Q    + KR++     +      +P G  +
Sbjct: 297 SNNTEPYWHPDGKSLIFTSDRGGRPQIYQVQLANGETKRLTWQGSQNLGGQ-ITPDGRFL 355

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                S   F +     +    ++L +    ++P+ +P+G  +I+S   +    + L  +
Sbjct: 356 VMVNRSNSGFNLAKQDLETGAVQILTKTLLDESPSIAPNGGMVIYSSIYN--KTNVLSMV 413

Query: 422 DLNGRNE-TLINTPAYASDPQWVGFM 446
            ++GR +  L  T      P W  F+
Sbjct: 414 SIDGRFKARLPATNGRVRAPAWSPFL 439


>gi|269103008|ref|ZP_06155705.1| TolB protein precursor [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268162906|gb|EEZ41402.1| TolB protein precursor [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 449

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 105/459 (22%), Positives = 200/459 (43%), Gaps = 35/459 (7%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVV 69
              + LCL+L+ +  F      A +++       +  P+++   K+    +L   +S VV
Sbjct: 3   RWIMGLCLMLLTVSQF----ARAELELVITDGVDSARPIAVVPFKWEGQGKLPTDISAVV 58

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           + DLQRS  F+ +      Q+ ++   I  +  W  +G   LV G V ++      V+++
Sbjct: 59  ASDLQRSGKFSPVPVAKMPQQPSDESQI-NYNAWTQMGVDALVMGTVSQDANGNYVVQYQ 117

Query: 130 LWDVKDRKQ--------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           L D+   +                     ++  +    P   R+ AH ISD +YQ +TGE
Sbjct: 118 LIDLVKGQLQSKQTTADANGQVVTEKNYILVNNRATVKPNRLRQYAHRISDVVYQKLTGE 177

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V+    S      L V D DG N R +  S+  I   P +SP+  K+AY 
Sbjct: 178 RGAFLTRIAYVAMEEKS-KFPYQLRVADYDGYNERTVLKSQQPI-MSPAWSPDGSKLAYV 235

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++++    ++Y+M+       + + ++     +PRFS +G +  + + K  ++ IY  DL
Sbjct: 236 SFENNKA-QIYIMNIYKGT-RELVSDYPRHNGSPRFSPDGSKLALVLSKSGSLQIYIKDL 293

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +    ++T     N    + P  + ++F SDR GK Q+Y +       +R++     + 
Sbjct: 294 NTKQLTQVTRGRANNTEPFWDPTGNSLIFTSDRGGKPQIYRVNLADGQTQRLTWQGSQNL 353

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   + I          ++L +    ++P+ +P+G  +I+S  
Sbjct: 354 GGQ-LTPDGRYLVMVNRSDTGYNIAKQDLKTGAVQVLTKTFLDESPSIAPNGSMIIYSSS 412

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVGFMD 447
                   L SID  GR +  + + +     P W  F++
Sbjct: 413 IGNSNELSLVSID--GRFKARLPSASDRVRSPAWGPFLN 449


>gi|296447816|ref|ZP_06889729.1| Tol-Pal system beta propeller repeat protein TolB [Methylosinus
           trichosporium OB3b]
 gi|296254675|gb|EFH01789.1| Tol-Pal system beta propeller repeat protein TolB [Methylosinus
           trichosporium OB3b]
          Length = 438

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 165/406 (40%), Positives = 247/406 (60%), Gaps = 5/406 (1%)

Query: 42  SANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ 101
           S  + PV++A   F   DE    ++ V+  +  RS     I      ++    D  P   
Sbjct: 38  SGGFQPVAVAVAPFAG-DEAARTLTSVIVNNFNRSVFLRPIEPGGRPEQAAASDGAPELD 96

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
            + SLGAQ +VTGR  +    RL+ EFRL+DV   +Q  G+++ +  A  R++AH +SD 
Sbjct: 97  LYRSLGAQYVVTGRAQRGPDGRLKTEFRLFDVATGEQAAGQQYVTEAAFARRVAHLVSDA 156

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           ++  ITGEKG F++R++FV ES      +  L +MD+DGAN+RYL+   D ++  PRFSP
Sbjct: 157 VFTRITGEKGFFDTRVVFVDESGPKERRRKRLAIMDQDGANVRYLSRG-DDLVVTPRFSP 215

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + Q V Y ++   D  +V L+     +  + +GNF  M  APRFS +G++ ++S+ +  +
Sbjct: 216 SSQDVTYMSFGAGDP-KVLLLSIESGQ-REVVGNFPGMTFAPRFSPDGQKIVMSLSQGAS 273

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++Y++DL+S  T RLT+T  I+ S SYSP  ++IVFESDR G +Q+YVM +NG   +RI
Sbjct: 274 TNLYAMDLRSRTTTRLTDTNAIDTSPSYSPSGAEIVFESDRGGSQQIYVMSANGGGARRI 333

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           S      Y  PVWSP+GD IAFT+ S   F IGVMK DGS ER+L E  + + PTW+P+G
Sbjct: 334 SF-GPGHYSTPVWSPKGDYIAFTRQSSGAFGIGVMKPDGSGERILTEGFHNEGPTWAPNG 392

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
             L+F R+  G +G+K++ +D+ GR+E  + TP+YASDP W    D
Sbjct: 393 LFLMFFREPGGQSGAKIHMVDVFGRSEFPVPTPSYASDPSWGPLQD 438


>gi|22126931|ref|NP_670354.1| translocation protein TolB [Yersinia pestis KIM 10]
 gi|45440866|ref|NP_992405.1| translocation protein TolB [Yersinia pestis biovar Microtus str.
           91001]
 gi|51595503|ref|YP_069694.1| translocation protein TolB [Yersinia pseudotuberculosis IP 32953]
 gi|108806599|ref|YP_650515.1| translocation protein TolB [Yersinia pestis Antiqua]
 gi|108813034|ref|YP_648801.1| translocation protein TolB [Yersinia pestis Nepal516]
 gi|145599837|ref|YP_001163913.1| translocation protein TolB [Yersinia pestis Pestoides F]
 gi|149366876|ref|ZP_01888910.1| TolB colicin import protein [Yersinia pestis CA88-4125]
 gi|153948506|ref|YP_001401831.1| translocation protein TolB [Yersinia pseudotuberculosis IP 31758]
 gi|162418362|ref|YP_001605922.1| translocation protein TolB [Yersinia pestis Angola]
 gi|165924647|ref|ZP_02220479.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165938286|ref|ZP_02226844.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166011590|ref|ZP_02232488.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166211563|ref|ZP_02237598.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167399720|ref|ZP_02305238.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167419672|ref|ZP_02311425.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167424139|ref|ZP_02315892.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|170025178|ref|YP_001721683.1| translocation protein TolB [Yersinia pseudotuberculosis YPIII]
 gi|186894556|ref|YP_001871668.1| translocation protein TolB [Yersinia pseudotuberculosis PB1/+]
 gi|218928292|ref|YP_002346167.1| translocation protein TolB [Yersinia pestis CO92]
 gi|229841061|ref|ZP_04461220.1| periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229843165|ref|ZP_04463311.1| periplasmic protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229894002|ref|ZP_04509188.1| periplasmic protein [Yersinia pestis Pestoides A]
 gi|229903474|ref|ZP_04518587.1| periplasmic protein [Yersinia pestis Nepal516]
 gi|270487254|ref|ZP_06204328.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           KIM D27]
 gi|294503129|ref|YP_003567191.1| translocation protein TolB precursor [Yersinia pestis Z176003]
 gi|32699710|sp|Q8ZGZ1|TOLB_YERPE RecName: Full=Protein tolB; Flags: Precursor
 gi|67461941|sp|Q66D90|TOLB_YERPS RecName: Full=Protein tolB; Flags: Precursor
 gi|118574601|sp|Q1CAF2|TOLB_YERPA RecName: Full=Protein tolB; Flags: Precursor
 gi|118574602|sp|Q1CFM9|TOLB_YERPN RecName: Full=Protein tolB; Flags: Precursor
 gi|166229995|sp|A4TNS8|TOLB_YERPP RecName: Full=Protein tolB; Flags: Precursor
 gi|166988087|sp|A7FKQ3|TOLB_YERP3 RecName: Full=Protein tolB; Flags: Precursor
 gi|226705901|sp|B2K8G1|TOLB_YERPB RecName: Full=Protein tolB; Flags: Precursor
 gi|226705902|sp|A9R2G2|TOLB_YERPG RecName: Full=Protein tolB; Flags: Precursor
 gi|226705903|sp|B1JG47|TOLB_YERPY RecName: Full=Protein tolB; Flags: Precursor
 gi|21959970|gb|AAM86605.1|AE013906_9 periplasmic protein [Yersinia pestis KIM 10]
 gi|45435724|gb|AAS61282.1| TolB colicin import protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51588785|emb|CAH20399.1| TolB colicin import protein [Yersinia pseudotuberculosis IP 32953]
 gi|108776682|gb|ABG19201.1| TolB colicin import protein [Yersinia pestis Nepal516]
 gi|108778512|gb|ABG12570.1| TolB colicin import protein [Yersinia pestis Antiqua]
 gi|115346903|emb|CAL19790.1| TolB colicin import protein [Yersinia pestis CO92]
 gi|145211533|gb|ABP40940.1| TolB colicin import protein [Yersinia pestis Pestoides F]
 gi|149291250|gb|EDM41325.1| TolB colicin import protein [Yersinia pestis CA88-4125]
 gi|152960001|gb|ABS47462.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia
           pseudotuberculosis IP 31758]
 gi|162351177|gb|ABX85125.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           Angola]
 gi|165913664|gb|EDR32283.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165923707|gb|EDR40839.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165989538|gb|EDR41839.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166207334|gb|EDR51814.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962413|gb|EDR58434.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050428|gb|EDR61836.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167056988|gb|EDR66751.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169751712|gb|ACA69230.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia
           pseudotuberculosis YPIII]
 gi|186697582|gb|ACC88211.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia
           pseudotuberculosis PB1/+]
 gi|229679244|gb|EEO75347.1| periplasmic protein [Yersinia pestis Nepal516]
 gi|229689512|gb|EEO81573.1| periplasmic protein [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229697427|gb|EEO87474.1| periplasmic protein [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229703887|gb|EEO90900.1| periplasmic protein [Yersinia pestis Pestoides A]
 gi|262361165|gb|ACY57886.1| translocation protein TolB precursor [Yersinia pestis D106004]
 gi|262365278|gb|ACY61835.1| translocation protein TolB precursor [Yersinia pestis D182038]
 gi|270335758|gb|EFA46535.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           KIM D27]
 gi|294353588|gb|ADE63929.1| translocation protein TolB precursor [Yersinia pestis Z176003]
 gi|320014264|gb|ADV97835.1| periplasmic protein [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 430

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 101/445 (22%), Positives = 200/445 (44%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +   +L       + + +HA V++       +  P+ +   K++       +
Sbjct: 1   MKQAFRVALGFLVL-------WASVLHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEE 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V  DL+ S  FN I      Q+ +    +     W +LG   +V G+V        
Sbjct: 54  IGAIVGADLRNSGKFNPIDAARMPQQPSTAAEV-TPAAWTALGIDAVVVGQVQPSADGSY 112

Query: 125 RVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D        +   ++  +    R  AHT+SD++++ +TG KG F +RI +V +
Sbjct: 113 VVSYQLVDTSGSAGSILAQNQYKVTKQWLRYSAHTVSDEVFEKLTGIKGAFRTRIAYVVK 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G   + L V D DG N +++     + L  P +SP+  K+AY T++        ++
Sbjct: 173 TN-GGKFPHELRVSDYDGYN-QFVVHRSPEPLMSPAWSPDGSKIAYVTFESGK--SALVI 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+   
Sbjct: 229 QTLANGAIRQVASFPRHNGAPAFSPDGTKLAFALSKSGSLNLYVMDLASGQISQVTDGRS 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N   S+ PDS  + + SD+ G+ Q+Y +  NG   +RI+ +   +    V SP G  + 
Sbjct: 289 NNTEPSWFPDSQNLAYTSDQGGRPQVYKVNINGGVPQRITWEGSQNQNADV-SPDGKFLV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +G    I     +    ++L +    + P+ +P+G  +I+S  +    GS L  + 
Sbjct: 348 LVSSNGGAQHIAKQDLETGAVQVLTDTLLDETPSIAPNGTMVIYSSTQG--LGSVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKFPAWSPYL 430


>gi|330959271|gb|EGH59531.1| translocation protein TolB [Pseudomonas syringae pv. maculicola
           str. ES4326]
          Length = 433

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 109/441 (24%), Positives = 209/441 (47%), Gaps = 13/441 (2%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +N+   L ++L    G         + V + S   +P+++    +     L   ++E+VS
Sbjct: 2   INLFRGLLVVLCFASGMVAAEEK-NILVTSGSDRAAPIAVVPFGWQGGSVLPEDMAEIVS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L
Sbjct: 61  NDLRNSGYYAPIPKQNMISLPTQASEVI-FRDWKALGAQYVMVGNITPAG-GRLQIQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSESNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++     R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQRRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMNLASRQLSRVTNDSSIDTEPFF 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D S + F SDR GK Q+Y    NG   +R++     +  +P  S     +        
Sbjct: 296 GKDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F + V        ++L + +  ++PT +P+G  +I++ ++ G     L  + +NGR 
Sbjct: 355 FTNFKVAVQDLARGSVKILTDSNLDESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|51473498|ref|YP_067255.1| translocation protein TolB [Rickettsia typhi str. Wilmington]
 gi|67461946|sp|Q68X69|TOLB_RICTY RecName: Full=Protein tolB; Flags: Precursor
 gi|51459810|gb|AAU03773.1| TolB protein precursor [Rickettsia typhi str. Wilmington]
          Length = 443

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 164/444 (36%), Positives = 247/444 (55%), Gaps = 20/444 (4%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE----LGGKVSEVVSKDLQR 75
           ++  I   F  + +A   +        P  IA  KF +       +G  V +V+S DL+ 
Sbjct: 4   IVYFILTLFSLTGYALETINIEHGRVDPTPIAVNKFNADSSNNDLVGNAVVKVISNDLKI 63

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F  IS  SF ++ T  +  P F  W  + A +LV G V      +L++ F LWD   
Sbjct: 64  SGLFRPISSASFIEEQTGINYKPLFAAWRQINASLLVNGEVQTLESGKLKISFILWDTFL 123

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            KQ+IG  F      WR+ AH I+D IY+ ITG+ G F+++I++VSES     IK  + +
Sbjct: 124 EKQLIGALFEVPTKLWRRAAHKIADKIYEKITGDPGYFDTKIVYVSESTALPKIK-RIAL 182

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD DGAN +YLT  +  ++  PRF+ +  K+ Y +Y  +    VY  D +  +    +G+
Sbjct: 183 MDYDGANNKYLTNGKS-LVLTPRFAHSADKIFYVSYATKSRALVYEKDLKTGKES-VVGD 240

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F  +  APRFS +GK+A++S+ K+ +  IY +DL +    +LT+   IN S SYSPD  +
Sbjct: 241 FVGISFAPRFSPDGKKAVMSIAKNGSTHIYEIDLATKQLNKLTDGFGINTSPSYSPDGKK 300

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---TKFSGEK-F 371
           IV+ SD+ G  QLY+M S+GSD +RIS     SY  P WSP+GD IAF   T+  GEK F
Sbjct: 301 IVYNSDKNGVPQLYIMNSDGSDVRRISFGG-GSYASPSWSPRGDYIAFTKITRHDGEKIF 359

Query: 372 AIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSIDL 423
            IG+MK       + ER++     +++P WSP+GR ++FS     +      +K+++IDL
Sbjct: 360 NIGIMKAYPQDHENSERIITSGYLVESPCWSPNGRVIMFSKGWPSRAKAPGKNKIFTIDL 419

Query: 424 NGRNETLINTPAYASDPQWVGFMD 447
            G NE  + TPA ASDP+W   ++
Sbjct: 420 TGHNEREVITPAGASDPEWSDVLN 443


>gi|237800226|ref|ZP_04588687.1| translocation protein TolB [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|237806414|ref|ZP_04593118.1| translocation protein TolB [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331023083|gb|EGI03140.1| translocation protein TolB [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331027527|gb|EGI07582.1| translocation protein TolB [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 433

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 106/434 (24%), Positives = 207/434 (47%), Gaps = 12/434 (2%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
            L+++        +    + V + S   +P+++    +     L   ++E+VS DL+ S 
Sbjct: 8   LLVVLCFASGIVAAEEKNILVTSGSDRAAPIAVVPFGWQGGSVLPEDMAEIVSNDLRNSG 67

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L++V   +
Sbjct: 68  YYAPIPKQNMISLPTQGSEVI-FRDWKALGAQYVMVGNITPAG-GRLQIQYALFNVATEQ 125

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GIIKNSLCVM 196
           Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+    S    + +L   
Sbjct: 126 QVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNTRYTLQRS 185

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R  ++I NF
Sbjct: 186 DYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR-REQITNF 242

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    +  D S +
Sbjct: 243 EGLNGAPAWSPDGNKLAFVLSKDGNPEIYVINLASRQLSRVTNDGAIDTEPFFGKDGSTL 302

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIG 374
            F SDR GK Q+Y    NG   +R++     +  +P  S     +           F + 
Sbjct: 303 YFTSDRGGKPQIYKTNINGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDGFTNFKVA 361

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           V        ++L + +  ++PT +P+G  +I++ ++ G     L  + +NGR    + T 
Sbjct: 362 VQDLARGSVKILTDSNLDESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRVRLPLPTA 419

Query: 435 -AYASDPQWVGFMD 447
                +P W  +++
Sbjct: 420 QGEVREPSWSPYLN 433


>gi|104783067|ref|YP_609565.1| translocation protein TolB [Pseudomonas entomophila L48]
 gi|122402282|sp|Q1I6F4|TOLB_PSEE4 RecName: Full=Protein tolB; Flags: Precursor
 gi|95112054|emb|CAK16781.1| TolB protein precursor [Pseudomonas entomophila L48]
          Length = 433

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 112/441 (25%), Positives = 203/441 (46%), Gaps = 14/441 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVS 70
           M   L  LLVL+      ++     +   S +     IA   F       L   +++++S
Sbjct: 1   MIKRLRGLLVLLCCVAGMAMAEEKNILVTSGSDRATPIAVVPFGVQGGSVLPEDMADIIS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G ++  G  RL+V + L
Sbjct: 61  NDLRNSGYYGPIPRQNMISLPTQASEVI-FRDWKALGAQYVMVGSIVPSG-GRLQVSYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGII 189
           ++V   +Q++           R +AH I+D  ++ +TG KG F++R+L+V+     +   
Sbjct: 119 FNVATEQQVLTGSVAGGVDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSTNNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFIQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G R    + KD   DIY +++ S    R+T    IN    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGTRLAFVLSKDGNPDIYVMNVASRQITRVTAGPGINTEPFW 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D + + F SDR GK Q+Y     G   +R++     +  +P  S     +        
Sbjct: 296 GKDGNTLYFTSDRGGKPQIYKQSVGGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQQG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F +          ++L E S  ++PT +P+G  LI++ ++ G     L  + LNGR 
Sbjct: 355 FTNFKVAAQDLQRGSVKILTETSLDESPTVAPNGTMLIYATRQQGRG--VLMLVSLNGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|294637421|ref|ZP_06715712.1| Tol-Pal system beta propeller repeat protein TolB [Edwardsiella
           tarda ATCC 23685]
 gi|291089414|gb|EFE21975.1| Tol-Pal system beta propeller repeat protein TolB [Edwardsiella
           tarda ATCC 23685]
          Length = 430

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 99/432 (22%), Positives = 196/432 (45%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           L+V +   + + +HA V++       +  P+ +   K++        +  +++ DL+ S 
Sbjct: 7   LMVGLLVLWASVLHAEVRIVITQGVDSARPIGVVPFKWMGPGAAPENIGGIIAADLRNSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-- 135
            FN I      Q+      +     W +LG   +V G+V         V ++L D     
Sbjct: 67  KFNPIDASRMPQQPATAAEV-TPAAWTALGIDAVVVGQVQPGADGSYLVSYQLVDTSGNP 125

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              +   ++  +    R  AHT SD++++ +TG KG F +RI +V ++   G     L V
Sbjct: 126 GSVLAQNQYKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRV 184

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N +++     + L  P +S +  K+AY T++        ++ T  + A +++ +
Sbjct: 185 ADYDGYN-QFVVHRSAEPLMSPAWSSDGSKLAYVTFESGR--SALVIQTLSNGAIRQVAS 241

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F     +P FS +G +   ++ K  ++++Y +DL S A  ++T+    N   S+ PDS  
Sbjct: 242 FPRHNGSPAFSPDGTKLAFALSKTGSLNLYVMDLASGAIRQVTDGRSNNTEPSWFPDSQN 301

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + F SD+ G+ Q+Y +  NG   +R++ +   +    V SP G  +     +     I  
Sbjct: 302 LAFTSDQAGRPQIYKININGGAAQRLTWEGAQNQDAEV-SPDGKFLVMVSSNAGAQHIAK 360

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTP 434
           +    +  ++L +    + P+ +P+G  +I+S  +    GS L  + ++GR +  L  T 
Sbjct: 361 LDLGTNATQVLTDTFLDETPSIAPNGTMVIYSSTQG--LGSVLQLVSIDGRFKARLPATD 418

Query: 435 AYASDPQWVGFM 446
                P W  ++
Sbjct: 419 GQVKFPAWSPYL 430


>gi|123443146|ref|YP_001007120.1| translocation protein TolB [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332160929|ref|YP_004297506.1| translocation protein TolB [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|166229994|sp|A1JRK8|TOLB_YERE8 RecName: Full=Protein tolB; Flags: Precursor
 gi|122090107|emb|CAL12970.1| TolB colicin import protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318604836|emb|CBY26334.1| tolb protein precursor, periplasmic protein involved in the
           TonB-independent uptake of group A colicins [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325665159|gb|ADZ41803.1| translocation protein TolB [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330864065|emb|CBX74142.1| protein tolB [Yersinia enterocolitica W22703]
          Length = 430

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 198/445 (44%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +   +L       + + +HA V++       +  P+ +   K++       +
Sbjct: 1   MKQAFRVALGFLVL-------WASVLHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEE 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V  DL+ S  FN I      Q+ +    +     W +LG   +V G+V        
Sbjct: 54  IGAIVGADLRNSGKFNPIDAARMPQQPSTAAEV-TPAAWTALGIDAVVVGQVQPSADGSY 112

Query: 125 RVEFRLWDV--KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D        +   ++  +    R  AHT SD++++ +TG KG F +RI +V +
Sbjct: 113 VVSYQLVDTSGAAGSVLAQNQYKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G   + L V D DG N +++     + L  P +SP+  K+AY T++        ++
Sbjct: 173 TN-GGKFPHELRVSDYDGYN-QFVVHRSPEPLMSPAWSPDGSKIAYVTFESGK--SALVI 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+   
Sbjct: 229 QTLANGAIRQVASFPRHNGAPAFSPDGTKLAFALSKSGSLNLYVMDLGSGQISQVTDGRS 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N   S+ PDS  + + SD+ G+ Q+Y +  NG   +RI+ +   +    V SP G  + 
Sbjct: 289 NNTEPSWFPDSQNLAYTSDQGGRPQVYKVNINGGAPQRITWEGSQNQNADV-SPDGKFLV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +G    I          ++L +    + P+ +P+G  +I+S  +    G+ L  + 
Sbjct: 348 LVSSNGGAQHIAKQDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSTQG--LGAVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKFPAWSPYL 430


>gi|299067719|emb|CBJ38928.1| protein tolB, component of the tol-pal system [Ralstonia
           solanacearum CMR15]
          Length = 435

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 122/450 (27%), Positives = 200/450 (44%), Gaps = 22/450 (4%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M +R F    L     + LL+VL  G       A + V    A  S   IA   F    +
Sbjct: 3   MMMRNFWKSGLRRSAWIGLLMVLCAGV----ARAQLYVEIAGAGSSQYPIAIANFQGESQ 58

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           +   ++ +V  DL  S  F+ +        +      P    W S GA   V G V + G
Sbjct: 59  IPQDITAIVRADLVHSGRFSNVDVAGA---VVPDSPAPDLGAWKSRGAAAFVGGTVTRNG 115

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
            DR  + FRL+D    + + G          R  AH I+D IYQ + G++G F +R+ +V
Sbjct: 116 -DRYEIRFRLYDTAKGESLGGLALTRGEGQLRLAAHEIADYIYQKLIGDRGVFATRLSYV 174

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S+       +  L + D DGAN +    S + I+  P +SP+  KVAY +++    + VY
Sbjct: 175 SKVG----RRYQLQISDSDGANPQVALTSNEPII-SPSWSPDGTKVAYVSFESRKPV-VY 228

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D    R    I N +    AP +S +G+R  +++ +D    IY V+   +   RLT +
Sbjct: 229 VHDLITGR-RAVISNQKGNNSAPAWSPDGRRVAVALSRDGNTQIYQVNADGSGLRRLTRS 287

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQ 357
             I+   S+SPD   I F SDR G  Q+Y M   G      +R++     +   P  SP 
Sbjct: 288 SAIDTEPSFSPDGRSIYFTSDRGGAPQIYRMPVEGEDAGSAQRVTFKGGYN-TSPRVSPD 346

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G L+A+    G  F + V          L + S  ++P+++ +G+ ++++ +  G   S 
Sbjct: 347 GKLLAYISRVGGAFKLYVQDLSNGDVTGLTDTSYDESPSFAANGKFILYATRVGGR--SV 404

Query: 418 LYSIDLNGRNETLIN-TPAYASDPQWVGFM 446
           L ++  +GR   +++       +P W  FM
Sbjct: 405 LAAVSTDGRTRQILSLQAGTVREPAWGPFM 434


>gi|325274582|ref|ZP_08140639.1| translocation protein TolB [Pseudomonas sp. TJI-51]
 gi|324100284|gb|EGB98073.1| translocation protein TolB [Pseudomonas sp. TJI-51]
          Length = 433

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 111/441 (25%), Positives = 208/441 (47%), Gaps = 14/441 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVS 70
           M   L  LLVL+      ++     +   S +     IA   F       L   +++++ 
Sbjct: 1   MIKRLRGLLVLLCCVAGLAVAEEKNILVTSGSDRATPIAVVPFGMQGGSVLPEDIADIIG 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  ++ I + +   + +    +  F+DW +LGAQ ++ G ++  G  RL+V++ L
Sbjct: 61  NDLRNSGYYSPIPRQNMISQPSQASEVI-FRDWKALGAQYVMVGSIVPSG-GRLQVQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGII 189
           ++V   +Q++      S    R +AH I+D  ++ +TG KG F++R+L+V+     +   
Sbjct: 119 FNVATEQQVLTGSVAGSTDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSTNNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++ +    R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQNIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +++ NF  +  AP +S +G R    + KD   DIY +++ S    R+T    IN    +
Sbjct: 236 REQVTNFEGLNGAPAWSPDGSRLAFVLSKDGNPDIYVMNMASRQISRVTAGPGINTEPFW 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D + I F SDR GK Q+Y    +G   +R++     +  +P  S     +        
Sbjct: 296 GKDGNTIYFTSDRGGKPQIYKQSVSGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQQG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F +          ++L E S  ++PT +P+G  LI++ ++ G     L  + LNGR 
Sbjct: 355 FTNFKVAAQDLQRGSVKILSETSLDESPTVAPNGTMLIYATRQQGRG--VLMLVSLNGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|84388529|ref|ZP_00991076.1| translocation protein TolB precursor [Vibrio splendidus 12B01]
 gi|84377078|gb|EAP93949.1| translocation protein TolB precursor [Vibrio splendidus 12B01]
          Length = 450

 Score =  394 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 109/458 (23%), Positives = 201/458 (43%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L L  V +        HA +++       +  P++I   ++   + L   VS V++
Sbjct: 1   MLKKLLLSFVFLIATSSQFAHAALELVITDGINSARPIAIVPFRWEGAEPLPHDVSAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ ++     Q   +   +  F  W +LG   L+TG + K  + +  V ++L
Sbjct: 61  SDLQRSGKFSPVATSKMPQTPYSESEV-DFDAWTNLGVDSLLTGSITKNTEGQYVVNYQL 119

Query: 131 WDVKDRKQ---------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            D+   +                      +  KK        R+ AH ISD +Y+ +TGE
Sbjct: 120 IDIVRGQLTKGQSRALSDEGQLVLSKDHVLFNKKATVPGKRLREYAHRISDLVYEELTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           KG F +RI +V  +         L V D DG N R +  S+ Q L  P +SP+ +K+AY 
Sbjct: 180 KGAFLTRISYVVVN-DKDKYPYQLRVADYDGFNERLVLRSK-QPLMSPAWSPDGKKLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +++M+       +++ ++     APRFS +GK   + + K  ++ +Y++DL
Sbjct: 238 SFQNGQA-EIFIMNIYTGD-REKVTSYPRHNGAPRFSPDGKTLALVLSKTGSLQVYTLDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            S    ++T     N    + PD   ++F SDR GK Q+Y +  + +   RI+     + 
Sbjct: 296 ASRKLTQITRGRSNNTEPFWYPDGKSLIFTSDRGGKPQIYNVNLSNNSTSRITWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S  
Sbjct: 356 GGQ-ITPDGRFLIMVNRSNSGFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGMVIYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +    + L  + ++GR +  L  T      P W  F+
Sbjct: 415 YN--KTNVLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|260779148|ref|ZP_05888040.1| TolB protein precursor [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605312|gb|EEX31607.1| TolB protein precursor [Vibrio coralliilyticus ATCC BAA-450]
          Length = 450

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 103/458 (22%), Positives = 200/458 (43%), Gaps = 30/458 (6%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +  ++ L  LL ++  F   +    + +     +  P++I   K+    +L   VS V++
Sbjct: 1   MLKRLVLGCLLTVMSAFQVANAALELVITDGIDSARPIAIVPFKWEGSTKLPHNVSAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ ++     Q   +   I  F  W  LG   L+TG + +  +    + ++L
Sbjct: 61  SDLQRSGKFSPVATSKMPQTPYSESEI-NFDAWTGLGVDALLTGTISQNAEGNYVINYQL 119

Query: 131 WDVKDRKQ---------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            DV   +                      +  K+        R+ AH ISD +Y+ +TGE
Sbjct: 120 VDVVRGQLTQGQSKALSTDGQLVLSKDHVLFNKRATVPGERMREYAHRISDLVYKELTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V  +         L V D DG N R +  S+ Q L  P +SP+ +K+AY 
Sbjct: 180 RGAFLTRIAYVVVN-DKDSYPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGKKLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +++M+       +++ ++     APRFS +G +  + + K  ++ +Y++DL
Sbjct: 238 SFQNGQA-EIFIMNIYTGE-REKVTSYPRHNGAPRFSPDGNKLALVLSKTGSLQVYTLDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           ++    ++T     N    + PD   ++F SDR GK Q+Y +        R++     + 
Sbjct: 296 KTRKLTQITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVDLASGSTNRLTWQGRQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S  
Sbjct: 356 GGQ-ITPDGRFLVMVNRSNSGFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGMVIYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
              +  + L  + ++GR +  L  T      P W  F+
Sbjct: 415 --FNKTNVLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|30248242|ref|NP_840312.1| translocation protein TolB [Nitrosomonas europaea ATCC 19718]
 gi|32699691|sp|Q82XN9|TOLB_NITEU RecName: Full=Protein tolB; Flags: Precursor
 gi|30180127|emb|CAD84129.1| probable tolB-related transport protein [Nitrosomonas europaea ATCC
           19718]
          Length = 425

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 110/435 (25%), Positives = 201/435 (46%), Gaps = 14/435 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M+  L    VL+  +  TS  A + +       + + IA   F     L   +S +VS D
Sbjct: 1   MRNFLYCTGVLLLLWMSTSSQAALNIEIFGGGTNKIPIAIAPFNGERGLPQSISAIVSAD 60

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+R+ +F L+         +      R+ DW   GA  LV G +      R+ V FRL D
Sbjct: 61  LERTGLFKLVDTLGL---TSQEPEQIRYIDWQGRGASALVVGSISPLPDGRIDVRFRLLD 117

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V  + Q+ G     +    R  AH I+D +Y+++TGE G F++RI FV +       + +
Sbjct: 118 VVKQTQLTGFSGAVTTEQLRAFAHRIADIVYETLTGEPGAFSTRIAFVRKQGS----QYA 173

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V D DG N R L    + I+  P +SP+  ++AY +++ +    V  + T   R  K 
Sbjct: 174 LQVSDYDGFNARSLIEYTEPII-SPAWSPDGSRIAYTSFEKKKP--VVYVQTLATRERKA 230

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + NF+    AP +S +G +  + +       IY ++   +  +R++ +  I+   S+SPD
Sbjct: 231 VANFKGSNSAPAWSPDGSKLAVVLTLHGGSQIYLINADGSGLQRISQSPGIDTEPSFSPD 290

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              ++F SDR G  Q+Y M  +G   +R++ + + +   P +SP G    +   +  +F 
Sbjct: 291 GRWLMFTSDRGGSPQIYRMPVSGGVAERMTFEGDYNV-SPHYSPDGKRFVYIHRNAGRFN 349

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLI 431
           + +      Q +LL + +  ++P++SP+ R ++++ +  G     L ++  +G     L 
Sbjct: 350 VAIQDLSTRQMQLLTDSNFDESPSFSPNNRMILYTTEIGGRGI--LSTVSSDGQAKSRLS 407

Query: 432 NTPAYASDPQWVGFM 446
                  +  W   +
Sbjct: 408 QEAGNIREAVWGPLL 422


>gi|183598188|ref|ZP_02959681.1| hypothetical protein PROSTU_01566 [Providencia stuartii ATCC 25827]
 gi|188020354|gb|EDU58394.1| hypothetical protein PROSTU_01566 [Providencia stuartii ATCC 25827]
          Length = 430

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 97/432 (22%), Positives = 190/432 (43%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           +++     + T   A +++       +  P+ +   K+        ++ ++V  DL+ S 
Sbjct: 7   VVLGFLMLWATVAQAEIRIEITEGVNSAQPIGVVPFKWSGSGTPPQEIGQIVGADLRNSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-- 135
            FN I      Q+      +   + W +LG   +V G++         V ++L DV    
Sbjct: 67  KFNPIEPSRMPQQPATASEVV-PEAWTALGINAVVVGQIQPAADGSYVVSYQLVDVAGSP 125

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              +   ++  +    R  AHT SD++++ +TG +G F +RI +V  +   G     L V
Sbjct: 126 GTVLSQNQYKVTKEWLRYAAHTASDEVFEKLTGIRGAFRTRIAYVV-TNKGGQYPYELRV 184

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N ++      + L  P +SP+ +++AY T++        ++ T    A +++ +
Sbjct: 185 SDYDGYN-QFTVHRSPEPLMSPTWSPDGERLAYVTFESGS--SALVIQTLSTGAVRQVAS 241

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   S+ PDS  
Sbjct: 242 FPRHNGAPAFSPDGTKLAFALSKTGSLNLYIMDLASGQIRQVTDGRSNNTEPSWMPDSQT 301

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +V+ SD+ G+ Q+Y +  NG   +R++ +   +  D   SP G  I      G +  I  
Sbjct: 302 LVYTSDQAGRPQIYKININGGSPERVTWEGTQNQ-DADVSPDGSFIVMVSSGGGQQHIAK 360

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTP 434
                     L +    + P+ +P+G  +I+S  +   T  +L  +  +GR +  L  T 
Sbjct: 361 QDLATGNVEYLTKTFLDETPSIAPNGTMVIYSSSQGLGTILQL--VSTDGRFKARLPATD 418

Query: 435 AYASDPQWVGFM 446
                P W  ++
Sbjct: 419 GQVKFPAWSPYL 430


>gi|261211900|ref|ZP_05926187.1| TolB protein precursor [Vibrio sp. RC341]
 gi|260839250|gb|EEX65882.1| TolB protein precursor [Vibrio sp. RC341]
          Length = 450

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 108/458 (23%), Positives = 203/458 (44%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L  +L+LIG    +  +A +++       +  P++I   K+    +L   +S V++
Sbjct: 1   MFKRLVFILMLIGTSMTSVANAALELVITDGIDSARPIAIIPFKWEGGTKLPEDISGVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ +      Q   + + +  F  W SLG   L+TG + +  +    + ++L
Sbjct: 61  SDLQRSGKFSPVPTSKMPQTPYSEEQV-NFGKWTSLGVDSLLTGTITQNAEGSYVISYQL 119

Query: 131 WDVKDRKQ---------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            D+   +                      +  K      +  R+ AH I+D +Y+ +TGE
Sbjct: 120 VDIVRGQLTQGQSKALSSDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V  +         L + D DG N R +  S+ Q L  P +SP+ Q +AY 
Sbjct: 180 RGAFLTRIAYVVVN-DKDPYPYQLRISDYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +Y+M+    +  K + +F     APRFS +GK   + + K   + +Y++DL
Sbjct: 238 SFQNGQA-EIYMMNIYSGQRDK-LTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +   + +T+    N    + PD   ++F SDR GK Q+Y +  +    KRI+     + 
Sbjct: 296 ATRRLKEVTDGRANNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSDGATKRITWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S  
Sbjct: 356 GGQ-ITPDGKFLVMVNRSDSGFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +    + L  + ++GR +  L  T      P W  F+
Sbjct: 415 YN--KANVLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|313202059|ref|YP_004040717.1| tol-pal system beta propeller repeat-containing protein tolb
           [Methylovorus sp. MP688]
 gi|312441375|gb|ADQ85481.1| Tol-Pal system beta propeller repeat protein TolB [Methylovorus sp.
           MP688]
          Length = 412

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 202/418 (48%), Gaps = 12/418 (2%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSF 87
            P +  A + +         + IA   F         ++ VV  DL+RS +F ++     
Sbjct: 3   LPLAGKAALTIEIVGGAAQQIPIAVVPFAKTPGAQDDIATVVGADLRRSGLFRVLETRGV 62

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
             +  +   + ++ +W ++ AQ L  G V      RL+V FRL DV  + Q+ G +F  +
Sbjct: 63  VNQPHDLPEV-KYPEWAAIQAQALTIGSVETLPGGRLKVSFRLLDVLKQNQLAGLEFNIA 121

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
            +  R  AH I+D IY+ +TGE G F++RI +++++      + +L V D DG N + + 
Sbjct: 122 ASQQRATAHKIADIIYEKLTGEPGVFSTRIAYITKTAG----RYALQVADADGFNPQTVM 177

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            S + ++  PR+SP+  K+AY +Y+ +    +  + + +      + NF+    AP +S 
Sbjct: 178 SSNEPVI-SPRWSPDGTKLAYVSYEKKKP--IVFVQSLVTGQRNVVANFKGNNSAPAWSP 234

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G R  I +       +Y ++      ++LT T  I+    ++PD S I F S+R G  Q
Sbjct: 235 DGNRLAIVLTHSANSQVYVINADGTGLKQLTYTTSIDTEPVWTPDGSAIYFTSNRGGGPQ 294

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y M S G D KR++ D   +   P  SP G  +A+ K    KF + V      Q ++L 
Sbjct: 295 IYRMASTGGDAKRVTFDGNYNV-SPRISPDGKTLAYIKQDNGKFRVAVQDVASGQVQVLS 353

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
           + +  ++P+++P+GR ++++    G     L ++  +GR  + L  T     +P W  
Sbjct: 354 DTAQDESPSFAPNGRMILYATSISGRGA--LAAVSADGRVKQRLSETGGDVREPAWGP 409


>gi|160898835|ref|YP_001564417.1| translocation protein TolB [Delftia acidovorans SPH-1]
 gi|160364419|gb|ABX36032.1| Tol-Pal system beta propeller repeat protein TolB [Delftia
           acidovorans SPH-1]
          Length = 441

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 109/427 (25%), Positives = 191/427 (44%), Gaps = 14/427 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF 79
           LL  +         A  +V       + + IA   F    +   K+S ++  DL+RS  F
Sbjct: 25  LLAALASTPAIPALAQFRVEVTGVGLTQLPIAIAAFKGEGQAPQKISAIIQADLERSGQF 84

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
             +     +    +  S P    W    A  L  G + +    R  V FRLWDV   + +
Sbjct: 85  RAVDTAGVQ---LDETSRPDVAMWRQKSADSLAVGSITRLADGRYDVRFRLWDVVKGQDL 141

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            G+ F  +    R +AH ISD IY+ +TGEKG F++RI +V+++  +      L V D D
Sbjct: 142 GGQGFAVTTGDLRLVAHRISDYIYEKLTGEKGVFSTRIAYVTKAGSN----YRLWVADAD 197

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N +    S + I+  P +SP   ++AY +++    + VY+ D    R  + + NFR  
Sbjct: 198 GENAQSALSSPEPII-SPAWSPTGTQLAYVSFESRKPV-VYVHDVASGR-RRLVANFRGS 254

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP +S +G    +++ +D    +Y +  Q     RL  +  I+   ++S D   I F 
Sbjct: 255 NSAPAWSPDGNSLAVTLSRDGGSQLYLISAQGGEPRRLMQSSGIDTEPNFSSDGRSIYFV 314

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SDR G  Q+Y + ++G   +R++     +   P  SP G  +A+    G  F + VM   
Sbjct: 315 SDRGGAPQIYKVPASGGSAERVTFTGNYN-ISPSVSPDGKWLAYVSRVGGGFKLHVMDLG 373

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYAS 438
                 + + +  ++P+++P+ R ++++  + G     L +  L+G+    L        
Sbjct: 374 TGTVNAITDTTADESPSFAPNSRLIVYATLQQGR--ESLMTTTLDGKIKARLAGQGGDIR 431

Query: 439 DPQWVGF 445
           +P W  F
Sbjct: 432 EPDWGPF 438



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 47/140 (33%), Gaps = 8/140 (5%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I FVS+   +      +  +   G +   +T + +     P  SP+ + +AY +     
Sbjct: 310 SIYFVSDRGGAP----QIYKVPASGGSAERVTFTGN-YNISPSVSPDGKWLAYVS-RVGG 363

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             ++++MD              +   +P F+ N +  + +  +     + +  L      
Sbjct: 364 GFKLHVMDLGTGTVNAI--TDTTADESPSFAPNSRLIVYATLQQGRESLMTTTLDGKIKA 421

Query: 296 RLTNTLFINISASYSPDSSQ 315
           RL           + P   Q
Sbjct: 422 RLAGQGGDIREPDWGPFQRQ 441


>gi|26987957|ref|NP_743382.1| translocation protein TolB [Pseudomonas putida KT2440]
 gi|60415976|sp|P0A173|TOLB_PSEPK RecName: Full=Protein tolB; Flags: Precursor
 gi|60415977|sp|P0A174|TOLB_PSEPU RecName: Full=Protein tolB; Flags: Precursor
 gi|24982670|gb|AAN66846.1|AE016313_5 tolB protein [Pseudomonas putida KT2440]
 gi|5514779|emb|CAB50781.1| TolB protein [Pseudomonas putida]
          Length = 433

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 109/441 (24%), Positives = 208/441 (47%), Gaps = 14/441 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVS 70
           M   L  LLV++      ++     +   S +     IA   F       L   +++++ 
Sbjct: 1   MIKRLRGLLVMLCCVAGMAVAEEKNILVTSGSDRATPIAVVPFGLQGGSVLPEDIADIIG 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  ++ I + +   + +    +  F+DW +LGAQ ++ G ++  G  RL+V++ L
Sbjct: 61  NDLRNSGYYSPIPRQNMISQPSQASEVI-FRDWKALGAQYVMVGSIVPSG-GRLQVQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGII 189
           ++V   +Q++      S    R +AH I+D  ++ +TG KG F++R+L+V+     +   
Sbjct: 119 FNVATEQQVLTGSVAGSTDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSTNNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++ +    R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQNIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +++ NF  +  AP +S +G R    + KD   DIY +++ S    R+T    IN    +
Sbjct: 236 REQVTNFEGLNGAPAWSPDGSRLAFVLSKDGNPDIYVMNVASRQISRVTAGPGINTEPFW 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D + + F SDR GK Q+Y    +G   +R++     +  +P  S     +        
Sbjct: 296 GKDGNTLYFTSDRGGKPQIYKQSVSGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQQG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F +          ++L E S  ++PT +P+G  LI++ ++ G     L  + LNGR 
Sbjct: 355 FTNFKVAAQDLQRGSVKILSETSLDESPTVAPNGTMLIYATRQQGRG--VLMLVSLNGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|300310549|ref|YP_003774641.1| periplasmic component of the Tol biopolymer transport system
           protein [Herbaspirillum seropedicae SmR1]
 gi|300073334|gb|ADJ62733.1| periplasmic component of the Tol biopolymer transport system
           protein [Herbaspirillum seropedicae SmR1]
          Length = 428

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 119/423 (28%), Positives = 196/423 (46%), Gaps = 15/423 (3%)

Query: 25  GGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ 84
           G  F  +  A ++        S + IA T F   +    +++ VV  DL RS VF LI  
Sbjct: 19  GLSFAPASQAQIRFEITGVGASQIPIAITAFPGEESAPQQITSVVKADLARSGVFKLIDN 78

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
                      S   + DW   GA  L  G V +    R  V +RL+D     Q+     
Sbjct: 79  GDALSD----SSAVNYADWQKRGANALAVGSVTRLADGRFDVRYRLFDTVQSSQLSALSI 134

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            + P   R  AH I+DDIYQ +TG  G F++RI +V++S      +  L V D DG   +
Sbjct: 135 GAQPQLLRLTAHKIADDIYQKLTGIPGIFSTRISYVTKSGG----EYRLEVADADGEGTQ 190

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
               S + I+  P +SP+  KVAY +++ +    V  +   + R    + NF+    AP 
Sbjct: 191 VALRSNEPII-SPSWSPDGTKVAYVSFEMKKP--VVYIQNLVTRQRSIVANFKGSNSAPA 247

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G R  +++ +D    +Y ++   +   RLTN+  I+    +SPD   I F SDR G
Sbjct: 248 WSPDGSRLAVALTRDGLTQVYVINADGSGLRRLTNSAGIDTEPQFSPDGGSIYFTSDRSG 307

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q+Y +  +G   +R++ +   +   P  SP G  +AF      +F +  +     QE 
Sbjct: 308 GPQVYKVGLDGGSPQRVTFNGSYN-ISPRISPDGKTLAFISRRDGQFQLYALDLTNGQEI 366

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWV 443
            L + S  Q+P+++P+G+ ++++ +  G  GS L  + ++GR  + L        +P W 
Sbjct: 367 RLSDGSRDQSPSFAPNGKYIMYATE-AGRRGS-LAVVSVDGRIKQRLTTQAGDIREPTWG 424

Query: 444 GFM 446
            FM
Sbjct: 425 PFM 427


>gi|285019183|ref|YP_003376894.1| biopolymer ABC transporter periplasmic protein [Xanthomonas
           albilineans GPE PC73]
 gi|283474401|emb|CBA16902.1| probable biopolymer transport protein, periplasmic component
           [Xanthomonas albilineans]
          Length = 439

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 117/442 (26%), Positives = 216/442 (48%), Gaps = 16/442 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAF---VKVATNSANY--SPVSIAFTKFVSIDELGG-KVS 66
           MK       VLI    P +  A    +++     N   +P+++    +          V+
Sbjct: 1   MKKLPRWFAVLIALLLPLTASAQDKGLEIDIVGGNASATPIAVVPMPYQGSAAAPSTDVA 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F  + +    ++ T    + ++  W +L    LV GRV+  G+   RV
Sbjct: 61  AVVRADLDRSGQFRDLPEAQMVERPTRGSDV-QYATWRALKQDYLVVGRVLDAGEGAYRV 119

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E+ L+DV   ++I+G    +   + R +AH ++D IY+ ITG +G F +RI +V+ S   
Sbjct: 120 EYELFDVAKGERILGLAMTARANAMRDVAHQMADAIYEKITGVRGAFWTRIAYVTASGKD 179

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G ++ +L V D DG N + +  S +  L  P +SP+ +K+AY +++  +   +Y+ D   
Sbjct: 180 GAMRYALMVADSDGYNPQTIVRSAEP-LLSPSWSPDGKKLAYVSFEHGNS-SIYIQDIAT 237

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             A + + +FR +  AP FS +G++  +++ +    +IY +DL S    +LTN   I+  
Sbjct: 238 G-ARQLVSSFRGINGAPSFSPDGRKLALTLSRSGNPEIYVMDLGSKQLTQLTNNFGIDTE 296

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +++PD + I F SDR G+ Q+Y + + G    RI+     +    V S  G  IA  + 
Sbjct: 297 PTWAPDGNSIYFTSDRGGRPQIYQVPATGGSATRITFQGNYNATASV-SYDGKKIAVAQG 355

Query: 367 SGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           SG  + I +M +     R   L   S  ++P+++P+   ++++ ++ G     LY++  +
Sbjct: 356 SGNSYKIAMMDRSLGAPRWSTLSTGSLDESPSFAPNASMVLYAAREGGRG--VLYAVSAD 413

Query: 425 GR-NETLINTPAYASDPQWVGF 445
            R  + L+       +P W  +
Sbjct: 414 ARVRQRLVLADGDVREPSWSPY 435


>gi|218462393|ref|ZP_03502484.1| translocation protein TolB [Rhizobium etli Kim 5]
          Length = 360

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 178/364 (48%), Positives = 250/364 (68%), Gaps = 4/364 (1%)

Query: 84  QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK 143
           + +F +K    D+ PRF+DW  + AQ LVTGRV KE   RLR EFRLWD    +Q+ G++
Sbjct: 1   KSAFIEKDLQSDASPRFEDWKVINAQALVTGRVTKEADGRLRAEFRLWDPFAGQQMTGQQ 60

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           FF+ P +WR++AH I+D IY+ ITGE+G F++R++FVSES      K  L +MD+DG N+
Sbjct: 61  FFTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQQRKRQLAIMDQDGFNV 120

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R LT   D ++  PRFSP++Q+V Y ++ ++   RVYL+     +  + +GNF  M  +P
Sbjct: 121 RMLTDGSD-LVLTPRFSPSRQEVTYMSFANQQP-RVYLLQLETGQ-REVVGNFPGMTFSP 177

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           RFS +G++ ++S+Q++   +IY++DL+S  T RLT+T  I+ S SYSPD +++ FESDR 
Sbjct: 178 RFSPDGQKVIMSLQQEGNSNIYTMDLRSRTTTRLTSTAAIDTSPSYSPDGARVSFESDRG 237

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           GK Q+YVM ++GS Q RIS   + SY  PVWSP+GDLIAFTK SG KF+IGVMK DGS E
Sbjct: 238 GKPQIYVMNADGSGQTRISF-GDGSYSTPVWSPRGDLIAFTKQSGGKFSIGVMKPDGSGE 296

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           R+L    + + PTW+P+GR L+F R+  G  G +LYSIDL G NE L+ TP Y SDP W 
Sbjct: 297 RILTTGFHNEGPTWAPNGRVLMFFRQAAGSGGPQLYSIDLTGYNEQLVKTPTYGSDPAWS 356

Query: 444 GFMD 447
             ++
Sbjct: 357 PLLE 360


>gi|315126276|ref|YP_004068279.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Pseudoalteromonas sp.
           SM9913]
 gi|315014790|gb|ADT68128.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Pseudoalteromonas sp.
           SM9913]
          Length = 452

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 110/458 (24%), Positives = 209/458 (45%), Gaps = 35/458 (7%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           KI +  L++++G  F    HA +++          P++I   K+  I  +  ++S+V++ 
Sbjct: 4   KIKIACLVLILG--FQGVAHAALEIVITEGIDGARPIAIVPFKYQGIGPIPEQLSDVIAA 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  F  +S     Q+  + D    +  W + G + ++ G V ++   R  V + L 
Sbjct: 62  DLMRSGKFKPVSVSQMPQQP-HKDGDIDYGAWVNKGVEAVLVGEVEQQTNGRYLVRYELV 120

Query: 132 DVKDRK--------------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           DV   +                     +  ++       +R+ +H ISD IY+ +TGEKG
Sbjct: 121 DVIRGQITGGETQMMSNGKLVQSQDHILEARQSVIGETGFRRYSHRISDVIYEKLTGEKG 180

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F ++I +V     +      L V D DG N + L  S++  L  P +SP+  K+AY T+
Sbjct: 181 AFLTKIAYVIVR-DTEEKPYQLVVADYDGFNEQVLLRSKEP-LMSPVWSPDGTKLAYVTF 238

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDL 289
           ++    ++Y+ D    +  + I +++ +  AP+FS +GK+ L+ + KD   A ++Y +DL
Sbjct: 239 ENRQS-QIYIQDIYTGK-RELITSYKGINGAPQFSPDGKKLLLVLSKDKTGATEVYLLDL 296

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +    RLT    I+   S+ P+   IVF S+R G  Q+Y +       +R++ D + + 
Sbjct: 297 LTRKETRLTRHRSIDTEPSWYPNGEDIVFTSERGGNAQIYKLNLKTGRTQRLTFDGDMNL 356

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                SP G  +     +  ++ +   +      ++L      ++P+ +P+G  +I+S  
Sbjct: 357 -AGSISPDGKELVMVNRTNGQYHLAKKELATGAFQVLTRTRLDESPSIAPNGSMIIYSTL 415

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +      L S+D  GR +  L         P W  ++
Sbjct: 416 HNNKQVLALVSMD--GRFKARLPVLDGQVKAPAWSPYL 451


>gi|238790498|ref|ZP_04634267.1| hypothetical protein yfred0001_12280 [Yersinia frederiksenii ATCC
           33641]
 gi|238721442|gb|EEQ13113.1| hypothetical protein yfred0001_12280 [Yersinia frederiksenii ATCC
           33641]
          Length = 430

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 101/445 (22%), Positives = 199/445 (44%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +   +L       + + +HA V++       +  P+ +   K++       +
Sbjct: 1   MKQAFRVALGFLVL-------WASVLHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEE 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V  DL+ S  FN I      Q+ +    +     W +LG   +V G+V        
Sbjct: 54  IGAIVGADLRNSGKFNPIDAARMPQQPSTAAEV-TPAAWTALGIDAVVVGQVQPSADGSY 112

Query: 125 RVEFRLWDV--KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D        +   ++  +    R  AHT SD++++ +TG KG F +RI +V +
Sbjct: 113 VVSYQLVDTSGAAGSVLAQNQYKVTKQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G   + L V D DG N +++     + L  P +SP+  K+AY T++        ++
Sbjct: 173 TN-GGKFPHELRVSDYDGYN-QFVVHRSPEPLMSPAWSPDGSKIAYVTFESGK--SALVI 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+   
Sbjct: 229 QTLANGAIRQVASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMDLGSGQISQVTDGRS 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N   S+ PDS  + + SD+ G+ Q+Y +  NG   +RI+ +   +    V SP G  +A
Sbjct: 289 NNTEPSWFPDSQNLAYTSDQGGRPQVYKVNINGGAPQRITWEGSQNQNADV-SPDGKFLA 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +G    I          ++L +    + P+ +P+G  +I+S  +    G+ L  + 
Sbjct: 348 LVSSNGGAQHIAKQDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSTQG--LGAVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKFPAWSPYL 430


>gi|32699701|sp|Q8DAM3|TOLB_VIBVU RecName: Full=Protein tolB; Flags: Precursor
          Length = 443

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 113/449 (25%), Positives = 198/449 (44%), Gaps = 30/449 (6%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNS-ANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDV 78
           LLVL+      +  A   + T+   +  P++I   K+     L   +S VV+ DLQRS  
Sbjct: 3   LLVLLSSVTNVANAALELIITDGIDSARPIAIVPFKWQGTKALPVDISSVVASDLQRSGK 62

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F+ +      Q   N   I  F  W +LG   L+TG V +  K    + ++L DV   + 
Sbjct: 63  FSPVPTSKMPQTPYNESEI-NFDAWTNLGVDTLLTGSVTQNEKGEYVINYQLVDVVRGQL 121

Query: 139 --------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
                               +  K    +    R+ AH ISD IY+ +TGE+G F +RI 
Sbjct: 122 TSGQSRALEDGQLVLSKDHVLFNKVATITAPRMREYAHRISDLIYEQLTGERGAFLTRIA 181

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +V  +         L V D DG N R +  S+ Q L  P +SP+ +++AY ++ +     
Sbjct: 182 YVVVN-DKDKFPYQLRVADYDGFNERLVLRSK-QPLMSPAWSPDGRRLAYVSFQNGQA-E 238

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +++++       +++ +F     APRFS +GK+  I + K  ++ IY++DLQ+    ++T
Sbjct: 239 IFVLNIYTGEH-EKLTSFPRHNGAPRFSPDGKKLAIVLSKTGSLQIYTLDLQTRQLTQIT 297

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                N    + PD   ++F SDR GK Q+Y +  +     R++     +      +P G
Sbjct: 298 RDRSNNTEPFWHPDGKSLIFTSDRGGKPQIYRVNLSDGSTSRLTWQGSQNLGGQ-ITPDG 356

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +     S   F +     +    ++L +    ++P+ +P+G  +I+S   D      L
Sbjct: 357 RFLIMVNRSDSGFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGMVIYSSIYDKKN--VL 414

Query: 419 YSIDLNGRNE-TLINTPAYASDPQWVGFM 446
             + ++GR +  L  T      P W  F+
Sbjct: 415 SMVSIDGRFKARLPATNGRVRAPAWSPFL 443


>gi|262165948|ref|ZP_06033685.1| TolB protein precursor [Vibrio mimicus VM223]
 gi|262171199|ref|ZP_06038877.1| TolB protein precursor [Vibrio mimicus MB-451]
 gi|261892275|gb|EEY38261.1| TolB protein precursor [Vibrio mimicus MB-451]
 gi|262025664|gb|EEY44332.1| TolB protein precursor [Vibrio mimicus VM223]
          Length = 450

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 109/458 (23%), Positives = 205/458 (44%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L  +L+LIG  F    +A +++       +  P++I   K+    +L   VS V++
Sbjct: 1   MFKRLIFVLMLIGTGFTNVANAALELVITDGIDSARPIAIIPFKWEGGTKLPEDVSAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ +      Q   + + +  F  W SLG   L+TG + +  +    + ++L
Sbjct: 61  SDLQRSGKFSPVPTSKMPQTPYSEEQV-NFGKWTSLGVDSLLTGTITQNAEGSYVISYQL 119

Query: 131 WDVKDRKQ---------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            D+   +                      +  K     P+  R+ AH I+D +Y+ +TGE
Sbjct: 120 VDIVRGQLTQGQSKALSPDGQLVLSKDHVLFNKVATVPPSRMREYAHRIADLVYEELTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V  +         L + D DG N R +  S+ Q L  P +SP+ Q +AY 
Sbjct: 180 RGAFLTRIAYVVVN-DKDPYPYQLRIADYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +++M+    +  K + +F     APRFS +GK   + + K   + +Y++DL
Sbjct: 238 SFQNGQA-EIFMMNIYTGQRDK-LTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +   + +T+    N    + PD   ++F SDR GK Q+Y +  +    KR++     + 
Sbjct: 296 ATRRLKEVTSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSDGATKRLTWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   F +  +  +    ++L +    ++P+ +P+G  +I+S  
Sbjct: 356 GGQ-ITPDGKFLVMVNRSDSGFNLAKLDLETGAMQILTKTLLDESPSIAPNGGMVIYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +    + L  + ++GR +  L  T      P W  F+
Sbjct: 415 YN--KANVLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|329888411|ref|ZP_08267009.1| tol-Pal system beta propeller repeat protein TolB [Brevundimonas
           diminuta ATCC 11568]
 gi|328846967|gb|EGF96529.1| tol-Pal system beta propeller repeat protein TolB [Brevundimonas
           diminuta ATCC 11568]
          Length = 486

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 163/451 (36%), Positives = 249/451 (55%), Gaps = 18/451 (3%)

Query: 8   AEELNMKINLCLLLVLIGGFF-PTSIHAFVK---------VATNSANYSPVSIAFTKFVS 57
              LN  +    +L +        S+ A            V  +     P+ IA   F  
Sbjct: 26  PMRLNRLLASAAVLAMTAPLALGGSVQAQSTPAVGAPMQDVVVDEGVLRPLQIAVVPFTG 85

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
            +  G ++S V+S +L+RS  F+ ++  SF +      + P F  W S+GAQ ++ G V 
Sbjct: 86  QN--GSQISGVISGNLKRSGFFDPLNPASFVETGLTLANAPNFPQWTSIGAQAVLYGGVT 143

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
                R+ V FRL+D   + Q++  +F ++   WR+IAH ISD +YQ +TGE G F+SR+
Sbjct: 144 PRADGRIDVGFRLYDPYRQCQLVSYQFTATSEQWRRIAHKISDVVYQRLTGEAGFFDSRV 203

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDI 236
           LFVSES       + L ++D+DG N  +LT   D+++  PRFS  N  +V Y     +D 
Sbjct: 204 LFVSESGTQLNKLSRLTIVDQDGYNPVFLTQG-DEVIMSPRFSASNPDEVTYVALG-KDY 261

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            R+YL +    R  + +G F   +LAPRFS++G +   S+ +    D+Y ++L+S    R
Sbjct: 262 SRIYLYNLSTGR-RESLGEFDGQVLAPRFSNDGSKMAFSIIRGGNTDVYVMNLRSRQLSR 320

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT    I+ S S+SPD +QIVF SDR G  +LY M+++GS Q+ IS+    SY  P WSP
Sbjct: 321 LTTDPGIDTSPSFSPDGNQIVFTSDRSGSARLYTMRADGSGQRPISRGG-GSYTAPAWSP 379

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           +GDL+AFTK  G +F IGVMK DG+ ER+L      + P+W+P+GR + F+R+  G   +
Sbjct: 380 RGDLVAFTKQQGGRFHIGVMKSDGTGERILSSSYFEEGPSWAPNGRYIAFARQSPG-GDT 438

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           +L+++DL+GR  +        SDP W G +D
Sbjct: 439 RLWTVDLSGRVVSQAGYDGRGSDPAWSGLLD 469


>gi|91776691|ref|YP_546447.1| TolB-like protein [Methylobacillus flagellatus KT]
 gi|91710678|gb|ABE50606.1| TolB-like protein [Methylobacillus flagellatus KT]
          Length = 415

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 114/422 (27%), Positives = 208/422 (49%), Gaps = 15/422 (3%)

Query: 27  FFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK---VSEVVSKDLQRSDVFNLIS 83
               + H  + V         + IA   F     + G+   ++ V+  DL+RS +F ++ 
Sbjct: 1   MATGAAHGALTVEIVGGAAQQIPIAVVPFAQQGVIPGQQDTIANVIGADLRRSGLFRVLE 60

Query: 84  QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK 143
                 + ++   +  +QDW ++ AQ L  G +     +RL+V FRL DV  + Q++G +
Sbjct: 61  TRGVANQPSDISQV-NYQDWAAIQAQALTIGNIETLPGNRLKVSFRLLDVYKQSQLVGME 119

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           +  +P+  R  AH I+D IYQ +TGE+G F +RI +VS+S      + +L V D DG N 
Sbjct: 120 YNITPSQLRLTAHKIADVIYQKLTGEQGVFATRIAYVSKSGG----RYALQVADSDGYNP 175

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +  S + I+  P +SP+  K+AY +++ +    +  + + +      + NF+    AP
Sbjct: 176 QTVVSSAEPII-SPVWSPDGTKLAYVSFEKKKP--IIYVQSLVSGQRTVLANFKGNNSAP 232

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +S +GKR  I +       IYS++      ++LT T  I+   ++SPD   I F SDR 
Sbjct: 233 AWSPDGKRLAIVLTHAANSQIYSINADGTGLQQLTRTTAIDTEPTWSPDGRYIYFTSDRG 292

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  Q+Y M S+G +  R++ +       P  SP G  +A+ +  G +F + +      Q 
Sbjct: 293 GSPQIYRMPSSGGEASRMTFEGSY-VVSPRLSPDGKSLAYIRRDGGQFRVALQDLQTGQV 351

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
           ++L +    ++P+++P+GR L+ + +  G     L ++  +GR  + L  +     +P W
Sbjct: 352 QVLSDGPKDESPSFAPNGRMLLHATRVGGRGA--LAAVSADGRVKQRLSESGGDVREPAW 409

Query: 443 VG 444
             
Sbjct: 410 GP 411



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 11/141 (7%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +++I + S   G+  L V  S+G + + +    E     PVWSP G  +A+  F  +K  
Sbjct: 150 ATRIAYVSKSGGRYALQVADSDGYNPQTVVSSAE-PIISPVWSPDGTKLAYVSFEKKKPI 208

Query: 373 IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           I V      Q  +L     N  AP WSP G+ L           S++YSI+ +G     +
Sbjct: 209 IYVQSLVSGQRTVLANFKGNNSAPAWSPDGKRLAIVLTHA--ANSQIYSINADGTGLQQL 266

Query: 432 N-------TPAYASDPQWVGF 445
                    P ++ D +++ F
Sbjct: 267 TRTTAIDTEPTWSPDGRYIYF 287


>gi|241764619|ref|ZP_04762634.1| Tol-Pal system beta propeller repeat protein TolB [Acidovorax
           delafieldii 2AN]
 gi|241365940|gb|EER60570.1| Tol-Pal system beta propeller repeat protein TolB [Acidovorax
           delafieldii 2AN]
          Length = 439

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 115/427 (26%), Positives = 199/427 (46%), Gaps = 14/427 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF 79
           LL  +         A  +V       + + IA   F    +   K++ +V  DL+RS  F
Sbjct: 23  LLAALISTPALPALAQFRVEVTGVGLTQLPIAIAPFRGEAQSPQKIAGIVQADLERSGQF 82

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
             +          +  S P    W   GA  L TG V +    R  V FRLWDV   + +
Sbjct: 83  RAVDAAG---STLDETSRPDVALWRQKGADSLATGSVTRLADGRFDVRFRLWDVVRGQDL 139

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            G+ F  +    R +AH I+D IY+ +TGE+G F++RI++V++S      + SL V D D
Sbjct: 140 GGQSFVVTQGDLRLVAHRIADYIYEKLTGERGVFSTRIVYVTKSG----TRYSLWVADAD 195

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N +    S + I+  P +SPN  ++AY +++    + VY+ D    R  + I NFR  
Sbjct: 196 GENAQSALSSPEPII-SPAWSPNGGQIAYVSFESRKPV-VYVHDVASGR-RRLIANFRGS 252

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP ++ +G+   +++ +D A  +Y++D       RL  +  I+    +S D   I F 
Sbjct: 253 NSAPAWAPDGRTLAVTLSRDGASQLYTIDANGGEPRRLMQSAGIDTEPVFSGDGRSIYFV 312

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SDR G  Q+Y + ++G + +R++     +   P  SP G  +A+    G  F + VM   
Sbjct: 313 SDRGGAPQIYKVPASGGNAERVTFSGTYN-ISPSISPDGRWLAYISRIGGAFKLHVMDLS 371

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYAS 438
                 + + S+ + P+++P+ R ++++ ++ G     L +  L+G+    L        
Sbjct: 372 SGAVSAITDTSSDENPSFAPNSRLIVYATQQQGR--EALMTTTLDGKIKARLAGQGGDIR 429

Query: 439 DPQWVGF 445
           +P W  F
Sbjct: 430 EPDWGPF 436



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 49/146 (33%), Gaps = 9/146 (6%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            GD  S I FVS+   +      +  +   G N   +T S       P  SP+ + +AY 
Sbjct: 303 SGDGRS-IYFVSDRGGAP----QIYKVPASGGNAERVTFSG-TYNISPSISPDGRWLAYI 356

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +       ++++MD              S    P F+ N +  + + Q+     + +  L
Sbjct: 357 S-RIGGAFKLHVMDLSSGAVSAI--TDTSSDENPSFAPNSRLIVYATQQQGREALMTTTL 413

Query: 290 QSNATERLTNTLFINISASYSPDSSQ 315
                 RL           + P   Q
Sbjct: 414 DGKIKARLAGQGGDIREPDWGPFQKQ 439


>gi|254506038|ref|ZP_05118182.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus 16]
 gi|219550856|gb|EED27837.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus 16]
          Length = 433

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 104/439 (23%), Positives = 194/439 (44%), Gaps = 31/439 (7%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
            HA +++       +  P++I   K+    +L   VS VV+ DLQRS  F+ I+ +   Q
Sbjct: 2   AHAALELVITDGIDSARPIAIVPFKWEGASKLPQDVSAVVASDLQRSGKFSPIATNRMPQ 61

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK------------ 137
              +   +  F  W  LG   L+TG + +  +    + ++L DV   +            
Sbjct: 62  TPYSEAEV-NFDAWTGLGVDSLLTGTITQNAEGNYVINYQLVDVVRGQLTQGQSKALSPD 120

Query: 138 ---------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
                     +  K+        R+ AH ISD +YQ +TGE+G F +RI +V  +     
Sbjct: 121 GQLVLSKDHVLFNKQATVPGDRLREYAHRISDLVYQELTGERGAFLTRIAYVVVNDKDQK 180

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N R +  S+ Q L  P +SP+ +K+AY ++ +     +Y+M+     
Sbjct: 181 FPYQLRVSDYDGYNERLVLRSK-QPLMSPAWSPDGKKLAYVSFQNGQA-EIYIMNIYTG- 237

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +++ ++     APRFS +G    + + K  ++ +Y++DL++    ++T     N    
Sbjct: 238 EREKVTSYPRHNGAPRFSPDGNSLALVLSKTGSLQVYTLDLKTRKLTQITRGRSNNTEPY 297

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PD   ++F SDR G+ Q+Y +   G    R++     +      +P G  +     S 
Sbjct: 298 WHPDGKSLIFTSDRGGRPQIYQVDLAGGSPNRLTWQGTQNLGGQ-ITPDGRFLVMVNRSN 356

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             F +     +    ++L +    ++P+ +P+G  +I+S   +    + L  + ++GR +
Sbjct: 357 AGFNLAKQDLETGAVQILTQTLLDESPSIAPNGGMVIYSSIYN--KANVLSMVSIDGRFK 414

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  F+
Sbjct: 415 ARLPATNGRVRAPAWSPFL 433


>gi|77360809|ref|YP_340384.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Pseudoalteromonas
           haloplanktis TAC125]
 gi|119371051|sp|Q3IJ16|TOLB_PSEHT RecName: Full=Protein tolB; Flags: Precursor
 gi|76875720|emb|CAI86941.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 452

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 111/458 (24%), Positives = 207/458 (45%), Gaps = 35/458 (7%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           K+ +  L++L+G  F    +A +++          P++I   K+  I  +  K+SEV++ 
Sbjct: 4   KVKVACLILLLG--FQGVANAALEIVITEGIDGARPIAIVPFKYQGIGPIPQKISEVIAA 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  F  +      Q+ +  DS   +  W + G + ++ G V ++   R  V + L 
Sbjct: 62  DLMRSGKFKPVDVAQMPQQPSK-DSDINYASWVNKGVEAILVGEVEQQSNGRYLVRYELV 120

Query: 132 DVKDRKQIIGKKFFSSPASW--------------------RKIAHTISDDIYQSITGEKG 171
           DV   +   G+    +                        R+ +H ISD IY+ +TGEKG
Sbjct: 121 DVIRGQITGGQTQMMTNGKLIKNQDHILEARESIISDTGFRRYSHRISDVIYEKLTGEKG 180

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F ++I +V     +      L V D DG N + L  S++  L  P +SP+  K+AY T+
Sbjct: 181 AFLTKIAYVIVR-DNDDRPYQLVVSDYDGFNEQVLLRSKEP-LMSPAWSPDGTKLAYVTF 238

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDL 289
           ++    ++Y+ D    +  + + ++  +  AP+FS +GK+ L+ + KD   A ++Y +DL
Sbjct: 239 ENRQS-QIYIQDLYSGK-RELVTSYPGINGAPQFSPDGKKLLLVLSKDKTGATEVYLLDL 296

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +    RLT    I+   S+ P+   IVF S+R G  Q+Y +       +R+S D + + 
Sbjct: 297 VTRKETRLTRHRSIDTEPSWHPNGQDIVFTSERGGNAQIYKLNLKTGRTQRLSFDGDMNL 356

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     +  ++ +   +      ++L      ++P+ +P+G  +I+S  
Sbjct: 357 -AGSITPDGKELVMVNRTNGQYHLAKKELATGAFQVLTRTRLDESPSIAPNGSMIIYSTL 415

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +      L S+D  GR +  L         P W  ++
Sbjct: 416 HNNKQVLALVSMD--GRFKARLPVLDGQVKAPAWSPYL 451


>gi|127512456|ref|YP_001093653.1| TolB domain-containing protein [Shewanella loihica PV-4]
 gi|166988083|sp|A3QD46|TOLB_SHELP RecName: Full=Protein tolB; Flags: Precursor
 gi|126637751|gb|ABO23394.1| TolB, N-terminal domain protein [Shewanella loihica PV-4]
          Length = 441

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 108/446 (24%), Positives = 203/446 (45%), Gaps = 22/446 (4%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSAN--YSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
           NL   L+L   F      A + +          P+++    +     +  ++S+VV  DL
Sbjct: 3   NLGRWLILGLAFLTIPAKAALDIVITEGVDAARPIAVVPFVWQGSTPMPQQISDVVMSDL 62

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  F  + +    Q+     +    + W+++ A+ +V G V   G D+  V F L D+
Sbjct: 63  TRSGTFKPMDELGLPQRNLGSLAQMDLKAWSNVAAEAVVMGTVKPYGPDQYLVNFELIDL 122

Query: 134 KDRKQ------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
              +             +  ++   S A +R+  H ISD +Y+ +TG +G F +RI +V 
Sbjct: 123 VKAQMQSGGPQSASEYLLDSRETVISSAQFRQYGHRISDIVYEKLTGIRGAFLTRIAYVV 182

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
                      L + D DG N + L  S +  L  P +SP+ +++AY +++++    V++
Sbjct: 183 VD-HKAKSPYKLMIADYDGYNEQMLLRSPEP-LMSPAWSPDGRRLAYVSFENKQA-EVFV 239

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +  K + +F  +  AP FS +GK+  +++ KD   +IY  D+ + A +R+TN  
Sbjct: 240 QDIYTQQRTK-VTSFPGINGAPTFSPDGKKLALTLSKDGQPEIYVADIATKAIKRVTNHY 298

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I+  AS++PD   ++F S+R G+ Q+Y +        R++ + E +      SP G  +
Sbjct: 299 AIDTEASWTPDGKSLIFTSERGGRPQIYQVALASGKVTRLTFEGEWNLGG-SISPDGRSM 357

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            F   +  KF I  M  +    ++L      ++P+ +P+G  +I+     G     L ++
Sbjct: 358 VFVNRTNGKFNIARMDLETRFMQVLTTTRLDESPSIAPNGTMVIYGTTYQGQQ--VLAAV 415

Query: 422 DLNGRNE-TLINTPAYASDPQWVGFM 446
            ++GR +  L         P W  F+
Sbjct: 416 SMDGRFKARLPVGQGEVKSPAWSPFL 441


>gi|332305764|ref|YP_004433615.1| Tol-Pal system beta propeller repeat protein TolB [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332173093|gb|AEE22347.1| Tol-Pal system beta propeller repeat protein TolB [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 451

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 118/457 (25%), Positives = 208/457 (45%), Gaps = 31/457 (6%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSK 71
            I +  +L  +      S  A +++       +  P+++   K+    ++   +SEV+S 
Sbjct: 1   MIRITRILTFLSLMLSASSQASLEIVITEGIDSARPIAVVPFKWNGPGQMPEALSEVISG 60

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  F+ I   S   +    DS   ++ W + G + ++ G V  EG DR RV F L 
Sbjct: 61  DLLRSGKFSPIDTASMPGQPHT-DSELDYRAWAATGVEAILVGSVTPEGPDRYRVNFTLV 119

Query: 132 DVKDRKQIIGK--------------------KFFSSPASWRKIAHTISDDIYQSITGEKG 171
           D    +   GK                    +   +   +R+ AH ISD +Y+ +TGEKG
Sbjct: 120 DAIRGQITGGKAQALNNGQLTNSNDHILDSRQTVITGEGFRQYAHRISDVVYEKLTGEKG 179

Query: 172 DFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            F +RI +V      +      L V D DG N   L  S++  L  P +SP+  K+AY T
Sbjct: 180 AFMTRIAYVVVRDRKTNAFPYQLVVADYDGVNETMLLRSKEP-LMSPSWSPDGTKLAYVT 238

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           ++++   ++Y+ D     +  ++ +F  +  AP FS NGK+  + + KD   +IY +D+ 
Sbjct: 239 FENKRS-QIYIQDLYT-MSRTQMTDFSGINSAPVFSPNGKQLAMVLSKDGNPEIYVMDIA 296

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           S   ER+T    I+   S+SPD   ++F S+R GK Q+Y +    +  +R++ D E +  
Sbjct: 297 SKRLERITRNRAIDTEPSWSPDGKSLIFSSERGGKPQIYRVDLASNSVRRVTFDGEMNLG 356

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               +P G  +     +   + I     +    ++L +    ++P+ +P+G  +I+S   
Sbjct: 357 G-TITPDGGRMVMVNRTRGNYNIAAQDLNNGNIQVLTKTYLDESPSIAPNGSMIIYSTLH 415

Query: 411 DGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            G     L  + L+GR +  L  +      P W  F+
Sbjct: 416 QGKQVLSL--VSLDGRFKARLPASDGQVKSPSWSPFL 450


>gi|300692237|ref|YP_003753232.1| protein tolB, component of the tol-pal system [Ralstonia
           solanacearum PSI07]
 gi|299079297|emb|CBJ51969.2| protein tolB, component of the tol-pal system [Ralstonia
           solanacearum PSI07]
          Length = 433

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 120/450 (26%), Positives = 200/450 (44%), Gaps = 22/450 (4%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M +R F    L     + LL+VL  G       A + V    A  S   IA   F    +
Sbjct: 1   MMMRNFWKSGLRRSAWIGLLMVLCAGV----ARAQLYVEIAGAGSSQYPIAIANFQGESQ 56

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           +   ++ ++  DL  S  F+ +        +      P    W S GA   V G V + G
Sbjct: 57  ISQNMTAIIRSDLVHSGRFSNVDVAGA---VVPDSPAPDLGAWKSRGAAAFVGGTVTRNG 113

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
            DR  + FRL+D    + + G          R  AH I+D IYQ + G++G F +R+ +V
Sbjct: 114 -DRYEIRFRLYDTAKGESLGGLALTRGEGQLRLAAHEIADYIYQKLIGDRGVFATRLSYV 172

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S+       +  L + D DGAN +    S + I+  P +SP+  KVAY +++    + VY
Sbjct: 173 SKVG----RRYQLQISDSDGANPQIALTSNEPII-SPSWSPDGTKVAYVSFESRKPV-VY 226

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D    R    I N +    AP +S +G+R  +++ +D    IY V+   +   RLT +
Sbjct: 227 VHDLVAGR-RTVISNQKGNNSAPAWSPDGRRVAVALSRDGNTQIYLVNADGSGLRRLTRS 285

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQ 357
             I+   S+SPD   I F SDR G  Q+Y M   G      +R++     +   P  SP 
Sbjct: 286 SAIDTEPSFSPDGRSIYFTSDRGGAPQIYRMPVEGEDAGSAQRVTFKGSYN-TSPRMSPD 344

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G L+A+    G  F + V          L + +  ++P+++ +G+ ++++ +  G   S 
Sbjct: 345 GKLLAYISRVGGAFKLYVQDLSNGDVTGLTDTAYDESPSFAANGKFILYATRVGGR--SV 402

Query: 418 LYSIDLNGRNETLIN-TPAYASDPQWVGFM 446
           L ++  +GR   +++       +P W  FM
Sbjct: 403 LAAVSTDGRTRQILSLQAGEVREPAWGPFM 432


>gi|161504090|ref|YP_001571202.1| translocation protein TolB [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160865437|gb|ABX22060.1| hypothetical protein SARI_02188 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 434

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 99/439 (22%), Positives = 189/439 (43%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M      +       +   +HA V++       +  P+ +   K+         +  +V+
Sbjct: 4   MMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVA 63

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+      + +   W++LG   +V G+V         V ++L
Sbjct: 64  ADLRNSGKFNPLDRSRLPQQPATAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQL 122

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 123 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 181

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 182 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 238

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 239 AVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPT 298

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y M  NG   +RI+ +   +  D   S  G  +     + 
Sbjct: 299 WFPDSQTLAFTSDQAGRPQVYKMNINGGAAQRITWEGSQNQ-DADVSSDGKFMVMVSSNN 357

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 358 GQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 415

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 416 ARLPATDGQVKSPAWSPYL 434


>gi|212712433|ref|ZP_03320561.1| hypothetical protein PROVALCAL_03527 [Providencia alcalifaciens DSM
           30120]
 gi|212684890|gb|EEB44418.1| hypothetical protein PROVALCAL_03527 [Providencia alcalifaciens DSM
           30120]
          Length = 430

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 104/432 (24%), Positives = 189/432 (43%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           +++     + T   A +++       +  P+ +   K+        +V  +V  DL+ S 
Sbjct: 7   IVLGFLMLWATVAQAEIRIEITEGVNSAQPIGVVPFKWAGAGAPPQEVGGIVGADLRNSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-- 135
            FN I  +   Q+      +     W +LG   +V G+V         V ++L DV    
Sbjct: 67  KFNPIDPNRMPQQPGTASEV-TPDAWTALGINAVVVGQVQPAADGSYVVSYQLVDVAANP 125

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              +   +F  +    R  AHT SD++++ +TG +G F +RI +V ++   G     L V
Sbjct: 126 GAVLAQNQFKVTKDWLRYAAHTASDEVFEKLTGIRGAFRTRIAYVVKTN-GGQYPYELRV 184

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N ++      + L  P +SP+ QK+AY T++        ++ T    A +++ +
Sbjct: 185 SDYDGFN-QFTVHRSPEPLMSPAWSPDGQKIAYVTFESGS--SALVIQTLSSGAVRQVAS 241

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   S+ PDS  
Sbjct: 242 FPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLGSGQIRQVTDGRSNNTEPSWMPDSQT 301

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +V+ SD+ G+ Q+Y M  NG    R+S +   +  D   SP G  +A     G +  I  
Sbjct: 302 LVYTSDQAGRPQIYKMNINGGSPVRVSYEGSQNQ-DADVSPDGTFLAMVSSGGGQQHIAK 360

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTP 434
                     L      + P+ +P+G  +I+S  +   T  +L  +  +GR +  L  T 
Sbjct: 361 QDLATGNVEYLTSTFLDETPSIAPNGTMVIYSSSQGLGTILQL--VSTDGRFKARLPATD 418

Query: 435 AYASDPQWVGFM 446
                P W  ++
Sbjct: 419 GQVKFPAWSPYL 430


>gi|327393166|dbj|BAK10588.1| protein TolB precursor [Pantoea ananatis AJ13355]
          Length = 431

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 103/439 (23%), Positives = 196/439 (44%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           MK  L + L      +   +HA V++       +  P+ +   K+         +  +V+
Sbjct: 1   MKQALRVTLGFFILLWAAVLHAEVRIEITQGVNSARPIGVVPFKWAGPGAAPEDIGGIVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+ T+   + +   W++LG   +V G++        +V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPTSAQEV-QPAAWSALGIDAVVVGQIQPNADGSYQVSYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R  AHT+SD+ +Q +TG KG F +RI +V ++   G 
Sbjct: 120 VDTAGAPGTVLAQNSYKITKQWLRYAAHTVSDEAFQKLTGIKGAFRTRIAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  KVAY T++        ++ T  + 
Sbjct: 179 FPYELRVADYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTFESGK--SALVIQTLSNG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+  + +   +
Sbjct: 236 AVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRYNSTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + + SD+ G  Q+Y +  NG   +RI+ +   +    V S  G  +     SG
Sbjct: 296 WFPDSQTLAYTSDQAGAPQIYKIGINGGSPQRITWEGAQNQDADVAS-DGKSMVMISTSG 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               +          + L +    + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GAQHVAKQDLVTGAVQTLTDTFLDETPSLAPNGTMVIYSSTQG--MGSVLQLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQVKFPAWSPYL 431


>gi|90412129|ref|ZP_01220135.1| translocation protein TolB precursor [Photobacterium profundum
           3TCK]
 gi|90326853|gb|EAS43238.1| translocation protein TolB precursor [Photobacterium profundum
           3TCK]
          Length = 448

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 111/457 (24%), Positives = 201/457 (43%), Gaps = 32/457 (7%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           MK  +  L + +  F      A +++       +  P+ +    +    +L   +S V++
Sbjct: 1   MKRWIMGLCIALLSFSQI-AQAELELVITEGVDSARPIGVIPFTWEGEGKLPTDISSVIA 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ ++     Q   + + I  +  W S+G   LVTG++ K       V ++L
Sbjct: 60  SDLQRSGKFSPVATSKMPQTPDSEEQI-DYNAWTSMGVDALVTGKITKNADGNYVVNYQL 118

Query: 131 WDVKDRKQ--------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
            DV   +                     ++  +        R+ AH ISD +Y+ +TG+K
Sbjct: 119 VDVVRGQLTSGESRGLANGELVLTKDHLLVNNRATVKETRLRQYAHRISDVVYEQLTGDK 178

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F +RI +V     S      L V D DG N R +  S+ Q L  P +SP+  K+AY +
Sbjct: 179 GAFLTRIAYVVIDDKS-KHPYQLRVADYDGFNERLVLKSQ-QPLMSPAWSPDGSKLAYVS 236

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           ++++   ++Y+MD       + + ++     +PRFS +GK+  I + K  ++ IY  +L+
Sbjct: 237 FENQQA-QIYIMDIYKGT-RELVTSYPRHNGSPRFSPDGKKLAIVLSKTGSLQIYIKNLE 294

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +    ++T+    N  A + PD   ++F SDR G+ Q+Y +    +  KR++     +  
Sbjct: 295 TKKLTQITSGRANNTEAFWDPDGKSLIFTSDRGGQPQIYRVNLADNSTKRLTWQGSQNLG 354

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               +P G  +     S   F I          ++L +    ++P+ +P+G  +I+S   
Sbjct: 355 GQ-LTPDGRYLVMVNRSDTGFNIAKQDLKTGAVQVLTKTFLDESPSIAPNGGMVIYSSVN 413

Query: 411 DGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           +      L SID  GR +  L  T      P W  F+
Sbjct: 414 NKSNELSLVSID--GRFKARLPTTNGRVRAPSWGPFL 448


>gi|327481491|gb|AEA84801.1| translocation protein TolB [Pseudomonas stutzeri DSM 4166]
          Length = 433

 Score =  392 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 112/441 (25%), Positives = 206/441 (46%), Gaps = 14/441 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVS 70
           M  +L  LLVL+      ++     +   S     + IA   F       L   ++E++ 
Sbjct: 1   MINSLRGLLVLLCCLAGIAVAQEKNIVVTSGADRAIPIAVVPFGWQGGTVLPEDMAEIIG 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            D++ + +F  I + +     T    I  ++DW +LGAQ ++ G +   G  RL+  + +
Sbjct: 61  NDMRNTGIFQPIPRQNMISMPTRGSEII-YRDWKALGAQYVMVGNIEPAG-GRLQARYEV 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG-II 189
           ++V   +Q++      SP   R +AH  +D  ++ +TG KG F++R+L+V+   + G   
Sbjct: 119 FNVTTEQQVMSGTVGGSPDQLRDMAHHAADQSFEKLTGIKGAFSTRLLYVTAERMGGANT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PR+SP+ +++AY +++ +   R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRYSPDGRRIAYVSFEQKRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP FS +G R    + KD   +IY +DL S   +RLTN   I+    +
Sbjct: 236 REQITNFEGLNGAPAFSPDGNRLAFVLSKDGNPEIYVMDLGSRQLQRLTNHYAIDTEPFW 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D   I + SDR GK Q+Y  +   +  +R++     +  +P  S     +        
Sbjct: 296 GADGQTIYYTSDRAGKPQIYKQRLGSNSAERVTFVGNYNA-NPKLSADEKTLVMIHRQDG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F +          R+L + S  ++PT +P+G  LI++ ++ G     L  + +NGR 
Sbjct: 355 YTNFKVAAQDLQRGNLRILSDTSLDESPTVAPNGTMLIYATRQQGRG--VLMLVSINGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|28897834|ref|NP_797439.1| translocation protein TolB [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838026|ref|ZP_01990693.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus AQ3810]
 gi|260361765|ref|ZP_05774790.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus K5030]
 gi|260876994|ref|ZP_05889349.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus AN-5034]
 gi|260899065|ref|ZP_05907506.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus Peru-466]
 gi|260900754|ref|ZP_05909149.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus AQ4037]
 gi|32699696|sp|Q87QT9|TOLB_VIBPA RecName: Full=Protein tolB; Flags: Precursor
 gi|28806047|dbj|BAC59323.1| TolB protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|149748560|gb|EDM59419.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus AQ3810]
 gi|308089165|gb|EFO38860.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus Peru-466]
 gi|308093918|gb|EFO43613.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus AN-5034]
 gi|308110191|gb|EFO47731.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus AQ4037]
 gi|308113266|gb|EFO50806.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           parahaemolyticus K5030]
          Length = 450

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 106/458 (23%), Positives = 197/458 (43%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L L + ++ G      HA +++       +  P+++   K+     L   +S V++
Sbjct: 1   MIKRLLLGMFVLLGSLTNVAHAALELVITDGIDSARPIAVVPFKWEGSQPLPTDISAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ +  +   Q   N   +  F  W SLG   L+TG + +  +    V ++L
Sbjct: 61  SDLQRSGKFSPVPTNKMPQTPFNESEV-NFDSWTSLGVDALLTGSIKQNEQGDYVVNYQL 119

Query: 131 WDVKDRKQ---------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            DV   +                      +  K         R+ AH ISD +Y+ +TGE
Sbjct: 120 VDVVRGQLTGGQSKALGSDGELVLSKDHVLFNKVATVKGPRMREYAHRISDLVYEQLTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V  +         L V D DG N R +  S+ Q L  P +SP+ QK+AY 
Sbjct: 180 RGAFMTRIAYVVVN-DKDRFPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGQKLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +++M+       ++I ++     APRFS +G +  + + K   + +Y+ DL
Sbjct: 238 SFQNGQA-EIFIMNIYTGE-REKITSYPRHNGAPRFSPDGNKLALVLSKTGTLQVYTFDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           ++    ++T +   N    + PD   ++F SDR GK Q+Y +        R++     + 
Sbjct: 296 KTRKLTQITRSRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLGSGSIDRLTWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   F +     +    ++L +    ++P+ +P+G  +++S  
Sbjct: 356 GGQ-ITPDGRFLVMVNRSDSGFNLAKQDLETGALQVLTKTLLDESPSIAPNGGMVVYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +      L  + ++GR +  L  T      P W  F+
Sbjct: 415 YNKKN--VLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|161615018|ref|YP_001588983.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168238898|ref|ZP_02663956.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168240606|ref|ZP_02665538.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|168264358|ref|ZP_02686331.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|168467689|ref|ZP_02701526.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|168820117|ref|ZP_02832117.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|194443806|ref|YP_002039989.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194450069|ref|YP_002044782.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194470048|ref|ZP_03076032.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194737053|ref|YP_002113855.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197250927|ref|YP_002145709.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197264907|ref|ZP_03164981.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|198244972|ref|YP_002214718.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200390881|ref|ZP_03217492.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204929894|ref|ZP_03220915.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|238911681|ref|ZP_04655518.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|161364382|gb|ABX68150.1| hypothetical protein SPAB_02778 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194402469|gb|ACF62691.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Newport str. SL254]
 gi|194408373|gb|ACF68592.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL476]
 gi|194456412|gb|EDX45251.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Kentucky str. CVM29188]
 gi|194712555|gb|ACF91776.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           CVM19633]
 gi|195629207|gb|EDX48575.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Newport str. SL317]
 gi|197214630|gb|ACH52027.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Agona str. SL483]
 gi|197243162|gb|EDY25782.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA23]
 gi|197288350|gb|EDY27731.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197939488|gb|ACH76821.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Dublin str.
           CT_02021853]
 gi|199603326|gb|EDZ01872.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Virchow str. SL491]
 gi|204320888|gb|EDZ06089.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Javiana str.
           GA_MM04042433]
 gi|205339859|gb|EDZ26623.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Heidelberg str. SL486]
 gi|205343003|gb|EDZ29767.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Weltevreden str.
           HI_N05-537]
 gi|205347159|gb|EDZ33790.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Hadar str. RI_05P066]
 gi|312911775|dbj|BAJ35749.1| tol-pal system protein TolB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321226327|gb|EFX51378.1| Tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Typhimurium str.
           TN061786]
 gi|322615818|gb|EFY12736.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322621377|gb|EFY18233.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322623634|gb|EFY20472.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322628904|gb|EFY25685.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322634886|gb|EFY31616.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322636586|gb|EFY33290.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641771|gb|EFY38405.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647827|gb|EFY44307.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322651359|gb|EFY47741.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322652660|gb|EFY49009.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322658641|gb|EFY54902.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664930|gb|EFY61121.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322668401|gb|EFY64557.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322675251|gb|EFY71327.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|323129060|gb|ADX16490.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|323191722|gb|EFZ76975.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323200616|gb|EFZ85691.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202287|gb|EFZ87335.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323205444|gb|EFZ90410.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323212128|gb|EFZ96953.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323216147|gb|EGA00876.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323221362|gb|EGA05781.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226785|gb|EGA10976.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230999|gb|EGA15115.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323234168|gb|EGA18257.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323238137|gb|EGA22195.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323243572|gb|EGA27590.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247403|gb|EGA31362.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323251392|gb|EGA35264.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323256485|gb|EGA40217.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323260624|gb|EGA44233.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323264695|gb|EGA48197.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270959|gb|EGA54394.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 431

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 99/439 (22%), Positives = 189/439 (43%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M      +       +   +HA V++       +  P+ +   K+         +  +V+
Sbjct: 1   MMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+      + +   W++LG   +V G+V         V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPATAQEV-QPTAWSALGIDAVVVGQVTPNPDGSYNVAYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 120 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 179 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 236 AVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y M  NG   +RI+ +   +  D   S  G  +     + 
Sbjct: 296 WFPDSQTLAFTSDQAGRPQVYKMNINGGAAQRITWEGSQNQ-DADVSSDGKFMVMVSSNN 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQVKSPAWSPYL 431


>gi|238893776|ref|YP_002918510.1| translocation protein TolB [Klebsiella pneumoniae NTUH-K2044]
 gi|262041200|ref|ZP_06014412.1| tol-Pal system beta propeller repeat protein TolB [Klebsiella
           pneumoniae subsp. rhinoscleromatis ATCC 13884]
 gi|329998744|ref|ZP_08303198.1| Tol-Pal system beta propeller repeat protein TolB [Klebsiella sp.
           MS 92-3]
 gi|238546092|dbj|BAH62443.1| translocation protein TolB precursor [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|259041429|gb|EEW42488.1| tol-Pal system beta propeller repeat protein TolB [Klebsiella
           pneumoniae subsp. rhinoscleromatis ATCC 13884]
 gi|328538571|gb|EGF64675.1| Tol-Pal system beta propeller repeat protein TolB [Klebsiella sp.
           MS 92-3]
          Length = 431

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 104/439 (23%), Positives = 193/439 (43%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M      +       +   +HA V++       +  P+ +   ++         V  +V+
Sbjct: 1   MMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFQWAGQGAAPEDVGGIVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+ T+   + +   W++LG   +V G+V +      +V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPTSAQEV-QPAAWSALGIDAVVVGQVTQNPDGSYQVAYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    F  +    R  AH  SD +++ +TG KG F +RI +V +    G 
Sbjct: 120 VDTGGAPGTTLAQGSFKVTKQYLRYAAHAASDAVFEKLTGIKGAFRTRIAYVVQKN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N ++L     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 179 YPYELRVSDYDGYN-QFLVHRSSQPLMSPAWSPDGSKLAYVTFESGR--SALVVQTLANA 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           + ++I +F     AP FS +G +   ++ K  ++++Y +DL S    ++TN    N   S
Sbjct: 236 SVRQIASFPQHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLGSGQIRQVTNGRSNNTEPS 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 296 WFPDSQNLAFTSDQAGRPQVYKVNINGGTPQRITWEGSQNQ-DADVSADGKTMVMVSSAG 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I     +    ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GQQHIAKQDLETGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQVKSPAWSPYL 431


>gi|145588463|ref|YP_001155060.1| translocation protein TolB [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145046869|gb|ABP33496.1| TolB, N-terminal domain protein [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 436

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 113/445 (25%), Positives = 217/445 (48%), Gaps = 17/445 (3%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           + + +   ++L  ++  +   F T   A + +       S   IA  +F   ++L   ++
Sbjct: 5   MNKMILKLLSLSAIVAALLCGFATPALAQMNIEITGVGQSLYPIAVMRFKDENKLPTNIT 64

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           E++ +DL RS  F      +  +   + +  P ++ W + GA  LV G V++ G  +  +
Sbjct: 65  EIIRQDLARSGYFKNTENGNATE---SDEGTPNYKSWAARGADALVVGSVVQTGNGQFDI 121

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            ++L+D++  + + G    SS  + R +AH I+DDI   + GE+G F++R+ +V +    
Sbjct: 122 HYKLFDIRKSQGLGGLNLNSSADNLRAVAHKIADDIIFKLLGERGVFSTRLSYVIKDG-- 179

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG NIR    S + I+  P +SP+ +KVAY +++D   + +Y+ +   
Sbjct: 180 --KRYRLVISDADGQNIRNAMNSSEPII-SPSWSPDGKKVAYVSFEDRKPV-IYVHELAT 235

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + N +    AP +S +GK+  +S+ KD    IY ++   +   RLT    I+  
Sbjct: 236 GRRIS-LSNQKGNNSAPAWSPDGKKLAVSLSKDGNTQIYGINADGSGLHRLTRGNTIDTE 294

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             YS D   I F SDR G  Q+Y M + G      KR++  K+     P  SP G  +A+
Sbjct: 295 PQYSADGRYIYFTSDRGGNPQIYRMSAEGEQVEGAKRVTF-KQGFVTSPRISPDGKYLAY 353

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G  + + ++       + L + ++ ++P+++ +GR +++S K  G     L ++ +
Sbjct: 354 IANVGGAYRLYILNLATGDSQALTDGTSDESPSFAANGRYVLYSTKVGGKR--VLAAVSV 411

Query: 424 NGRNETLINTPA-YASDPQWVGFMD 447
           +G ++ +++ P      P W  FMD
Sbjct: 412 DGNSKQVLSIPGSDVRQPSWGPFMD 436


>gi|90580127|ref|ZP_01235935.1| translocation protein TolB precursor [Vibrio angustum S14]
 gi|90439012|gb|EAS64195.1| translocation protein TolB precursor [Vibrio angustum S14]
          Length = 442

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 109/451 (24%), Positives = 209/451 (46%), Gaps = 27/451 (5%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVV 69
              + LCL L+ +  F     HA +++       +  P+ +   ++    +L   +S V+
Sbjct: 3   RWIMGLCLALLSVSQF----AHAELELVITDGVDSARPIGVVPFQWEGEGKLPTDISAVI 58

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           + DLQRS  F+ + +    Q   N   I  +  W+ +G   +VTG ++K       V ++
Sbjct: 59  ASDLQRSGKFSPVPESKLPQLPHNESQI-DYSAWSKMGVDAVVTGTIVKNQDGNYTVNYQ 117

Query: 130 LWDVKDRKQ-------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
           L D+   K              ++  +    P   R+ AH ISD IYQ +TGE+G F +R
Sbjct: 118 LVDIVKGKLAAGTEGAAKGDYLLLNNQASVKPNRMRQYAHRISDLIYQKLTGERGAFLTR 177

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I +V ++  S      L V D DG N R +  S+ Q L  P +SP+  K+AY +++    
Sbjct: 178 IAYVDDNRSS-KFPYQLRVADYDGYNERVVLKSK-QPLMSPAWSPDGSKLAYVSFESGKA 235

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            +++++D    +  + + ++     +P+FS +G +  + + K  ++ IY  DL++    +
Sbjct: 236 -QIFVLDIYTGK-REVVADYPRHNGSPQFSPDGTKLAMVLSKTGSLQIYIKDLKTKQLRQ 293

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T+    N  A ++PD   + F SDR G+ Q+Y +     D +R++     +   P  +P
Sbjct: 294 ITHGRANNTEAVWAPDGQSLYFTSDRGGRPQVYHLDLAIGDTQRVTWQGAQN-MGPQITP 352

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +     S   + I          ++L +    ++P+ +P+G  +I+S  ++  T  
Sbjct: 353 DGRYLVVVNRSDSGYNIAKQDLKTGAMQILTKARLAESPSIAPNGSMIIYSSAQNNGT-Y 411

Query: 417 KLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           +L  + ++GR +  L +T      P W  F+
Sbjct: 412 ELSLVSIDGRFQARLPSTSKRVRAPSWGPFL 442


>gi|156973900|ref|YP_001444807.1| translocation protein TolB [Vibrio harveyi ATCC BAA-1116]
 gi|156525494|gb|ABU70580.1| hypothetical protein VIBHAR_01610 [Vibrio harveyi ATCC BAA-1116]
          Length = 442

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 108/451 (23%), Positives = 196/451 (43%), Gaps = 33/451 (7%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           + VL+G    +  HA +++       +  PV++   K+   + L   +S V++ DLQRS 
Sbjct: 1   MFVLLGSL-TSVAHAALELVITDGIDSARPVAVVPFKWEGSEPLPTDISAVIASDLQRSG 59

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F+ +      Q   N   +  F  W  LG   L+TG + K  +    V ++L DV   +
Sbjct: 60  KFSPVPTSKMPQTPFNESEV-NFDAWTGLGVDALLTGSIKKNEQGNYVVNYQLVDVVRGQ 118

Query: 138 QIIGKK---------------------FFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
              GK                              R+ AH ISD +Y+ +TGE+G F +R
Sbjct: 119 LTGGKSKALGGDGELVLSKDHVLFNKVATVEGPRMREYAHRISDLVYEQLTGERGAFMTR 178

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I +V  +         L V D DG N R +  S+ Q L  P +SP+ QK+AY ++ +   
Sbjct: 179 IAYVVVN-DKDNFPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGQKLAYVSFQNGQA 236

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             +++M+       ++I ++     APRFS +G +  + + K  ++ +Y++DL++    +
Sbjct: 237 -EIFIMNIYTGE-REKITSYPRHNGAPRFSPDGSQLALVLSKTGSLQVYTLDLKTRKLTQ 294

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T     N    + PD   ++F SDR GK Q+Y +        R++     +      +P
Sbjct: 295 ITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVDLGSGSTNRLTWQGSQNLGGQ-ITP 353

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S   +     
Sbjct: 354 DGRFLVMVNRSDSGFNLAKQDLETGALQVLTKTLLDESPSIAPNGGMVIYSSIYNKKN-- 411

Query: 417 KLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            L  + ++GR +  L  T      P W  F+
Sbjct: 412 VLSMVSIDGRFKARLPATNGRVRAPAWSPFL 442


>gi|326622474|gb|EGE28819.1| translocation protein TolB precursor [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|326627053|gb|EGE33396.1| translocation protein TolB precursor [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 434

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 99/439 (22%), Positives = 189/439 (43%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M      +       +   +HA V++       +  P+ +   K+         +  +V+
Sbjct: 4   MMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVA 63

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+      + +   W++LG   +V G+V         V ++L
Sbjct: 64  ADLRNSGKFNPLDRSRLPQQPATAQEV-QPTAWSALGIDAVVVGQVTPNPDGSYNVAYQL 122

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 123 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 181

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 182 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 238

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 239 AVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPT 298

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y M  NG   +RI+ +   +  D   S  G  +     + 
Sbjct: 299 WFPDSQTLAFTSDQAGRPQVYKMNINGGAAQRITWEGSQNQ-DADVSSDGKFMVMVSSNN 357

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 358 GQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 415

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 416 ARLPATDGQVKSPAWSPYL 434


>gi|315180559|gb|ADT87473.1| translocation protein TolB precursor [Vibrio furnissii NCTC 11218]
          Length = 439

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 104/439 (23%), Positives = 195/439 (44%), Gaps = 32/439 (7%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
            +A +++       +  P++I   K+    +L   VS V++ DLQRS  F+ I  +   Q
Sbjct: 9   ANAALELVITDGINSARPIAIVPFKWEGKTKLPQDVSGVIASDLQRSGKFSPIPTNKMPQ 68

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK------------ 137
              N   + +F  W S+G   L+TG + +       + ++L DV   +            
Sbjct: 69  TPYNEADV-KFDAWTSIGVDALLTGSITQNADGNYVINYQLVDVVRGQLTQGQSRALSSD 127

Query: 138 ---------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
                     +  K         R+ AH I+D +Y+ +TGE+G F +RI +V  +     
Sbjct: 128 GQLVLSKDHVLFNKVATVPAKRMREYAHRIADLVYEELTGERGAFLTRIAYVVVN-DKDA 186

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N R +  S+ Q L  P +SP+ +K+AY ++ +     +Y+M+     
Sbjct: 187 YPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGKKLAYVSFQNGQA-EIYIMNIYTG- 243

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +++ ++     APRFS +GK   + + K  ++ +Y++DL S    ++T+    N    
Sbjct: 244 EREKVTSYPRHNGAPRFSPDGKTLALVLSKTGSLQVYTLDLTSRKLTQITSGRSNNTEPF 303

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++PD   ++F SDR GK Q+Y +       KR++     +      +P G  +     S 
Sbjct: 304 WNPDGKSLIFTSDRGGKPQIYQVNLTDGATKRLTWQGSQNLGGQ-ITPDGRFLVMVNRSN 362

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             F +     +    ++L +    ++P+ +P+G  +I+S   +    + L  + ++GR +
Sbjct: 363 SGFNLAKQDLETGSVQILTKTLLDESPSIAPNGGMVIYSSIYN--KANVLSMVSIDGRFK 420

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  F+
Sbjct: 421 ARLPATNGRVRAPAWSPFL 439


>gi|167554282|ref|ZP_02348023.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
 gi|205321483|gb|EDZ09322.1| tol-Pal system beta propeller repeat protein TolB [Salmonella
           enterica subsp. enterica serovar Saintpaul str. SARA29]
          Length = 431

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 99/439 (22%), Positives = 190/439 (43%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M      +       +   +HA V++       +  P+ +   K+         +  +V+
Sbjct: 1   MMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+      + +   W++LG   +V G+V         V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPATAQEV-QPTAWSALGIDAVVVGQVTPNPDGSYNVAYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R  +HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 120 VDTGGAPGTVLAQNSYKVNKQWLRYASHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 179 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 236 AVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y M  NG   +RI+ +   +  D   S  G  +     + 
Sbjct: 296 WFPDSQTLAFTSDQAGRPQVYKMNINGGAAQRITWEGSQNQ-DADVSSDGKFMVMVSSNN 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQVKSPAWSPYL 431


>gi|323495161|ref|ZP_08100246.1| translocation protein TolB [Vibrio brasiliensis LMG 20546]
 gi|323310601|gb|EGA63780.1| translocation protein TolB [Vibrio brasiliensis LMG 20546]
          Length = 437

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 104/445 (23%), Positives = 197/445 (44%), Gaps = 30/445 (6%)

Query: 24  IGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLIS 83
           +  F   +    + +     +  P++I   K+    +L   VS V++ DLQRS  F+ ++
Sbjct: 1   MSAFQVANAALELVITDGIDSARPIAIVPFKWEGNGKLPEDVSAVIASDLQRSGKFSPVA 60

Query: 84  QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ----- 138
            +   Q   +   +  F  W  LG   LVTG + +  +    + ++L DV   +      
Sbjct: 61  TNKMPQTPYSEAEV-DFNAWTGLGVDALVTGSITQNAEGNYVINYQLVDVVRGQLTQGQS 119

Query: 139 ----------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
                           +  K+        R+ AH ISD +Y+++TGEKG F +RI +V  
Sbjct: 120 KALSDDGQLVLSKDHVLFNKRATVPGKRLREYAHRISDLVYEALTGEKGAFLTRIAYVVV 179

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +         L V D DG N R +  S+ Q L  P +SP+ +K+AY ++ +     +++M
Sbjct: 180 N-DKDQFPYQLRVSDYDGYNERLVLRSK-QPLMSPAWSPDGKKLAYVSFQNGQA-EIFIM 236

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +       +++ ++     APRFS +G +  + + K  ++ +Y++DL S    ++T    
Sbjct: 237 NIYTGE-REKVTSYPRHNGAPRFSPDGSKLALVLSKTGSLQVYTLDLNSRKLTQITRGRS 295

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N    + PD   ++F SDR GK Q+Y +    +  KRI+     +      +P G  + 
Sbjct: 296 NNTEPFWHPDGKSLIFTSDRGGKPQIYQVDLASNSTKRITWQGSQNLGGQ-ITPDGRFLV 354

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               S   F +  +  +    ++L +    ++P+ +P+G  +I+S   +    + L  + 
Sbjct: 355 MVNRSNTGFNLAKLDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYN--KTNVLSMVS 412

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
           ++GR +  L  T      P W  F+
Sbjct: 413 IDGRFKARLPATNGRVRAPAWSPFL 437


>gi|330811387|ref|YP_004355849.1| Colicin import protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379495|gb|AEA70845.1| Colicin import protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 433

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 109/441 (24%), Positives = 210/441 (47%), Gaps = 14/441 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M+  L  +LV+I      ++     +   S     +P+++    +     L   ++E++ 
Sbjct: 1   MRNLLRSMLVVICCLAGIAVAEEKNILVTSGSDRATPIAVVPFGWQGGSVLPDDMAEIIG 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +     T    +  ++DW +LGAQ ++ G ++  G  RL+V++ L
Sbjct: 61  NDLRNSGYYAPIPKQNMISLPTQASEVI-YRDWKALGAQYIMVGSIVPAG-GRLQVQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +Q++      S    R ++H I+D  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQQVLTGSVSGSVDQLRDMSHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G R    + KD   DIY ++L S +  R+TN   IN    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGSRLAFVLSKDGNPDIYVMNLASRSISRVTNGPGINTEPFW 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D S I F SDR GK Q+Y   + G   +R++     +  +P  S     +        
Sbjct: 296 GKDGSTIYFTSDRGGKPQIYKTSAGGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F +          ++L + +  ++PT +P+G  +I++ ++ G     L  + +NGR 
Sbjct: 355 FTNFKVAAQDLQRGSVKILTDSTLDESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|329295948|ref|ZP_08253284.1| translocation protein TolB [Plautia stali symbiont]
          Length = 431

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 100/439 (22%), Positives = 197/439 (44%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           MK  L + L      +   +HA V++          P+ +   ++         +  +V+
Sbjct: 1   MKQALRVTLGFFVLLWAAMLHAEVRIEITQGVNTARPIGVVPFQWAGPGAAPEDIGGIVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+ T+   + +   W++LG   +V G+V        +V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPTSAQEV-QPAAWSALGIDAVVVGQVTPNADGSYQVAYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R  AHT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 120 VDTGGAPGTVLAQNSYKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  KVAY T++        ++ T  + 
Sbjct: 179 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTFESGK--SALVVQTLANG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ ++     AP FS +G +   ++ K  ++++Y +DL S  T ++T+  + +   +
Sbjct: 236 AIRQVASYPRHNGAPAFSPDGSKLAFALSKTGSLNLYVIDLASGQTRQVTDGRYNSTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + + SD+ G  Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 296 WFPDSQTLAYTSDQAGAPQIYKVNVNGGTPQRITWEGAQNQ-DADVSSDGKTMVMISSAG 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               +     +    + + +    + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GAQHVAKQDLETGAVQTITDTFLDETPSLAPNGTMVIYSSTQG--MGSVLQLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQGKFPAWSPYL 431


>gi|300722397|ref|YP_003711683.1| hypothetical protein XNC1_1420 [Xenorhabdus nematophila ATCC 19061]
 gi|297628900|emb|CBJ89483.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Xenorhabdus nematophila
           ATCC 19061]
          Length = 439

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 98/432 (22%), Positives = 190/432 (43%), Gaps = 12/432 (2%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           +++     +    HA V++       +  P+ +   K+  + E+   +  +++ DL+ S 
Sbjct: 15  IVLGFLMMWAALAHAEVRIEITQGVDSARPIGVVPFKWTGVGEVPENIGSIIAADLRNSG 74

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-- 135
            FN I      Q+ T    +     W++LG   +V G +      +  V ++L D     
Sbjct: 75  KFNPIDPTRMPQQPTTASEV-TPAAWSALGIDSVVVGHIQPSADGKFLVSYQLVDTAGAP 133

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              +   +F       R  AHT+SD +++ +TG KG F +RI ++ ++         L V
Sbjct: 134 GTVLAQDQFSIERKWLRLSAHTVSDQVFEKLTGIKGAFRTRIAYIVKNTNGAKFPYELRV 193

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N + +     + L  P +SP+  K+AY T++      V  + T      + + +
Sbjct: 194 SDYDGYN-QSMVHRSPEPLMSPAWSPDASKLAYVTFEGGSSSLV--IQTLATGTKREVAS 250

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F     AP FS +G +   ++ K  ++++Y +DL SN   ++T+    N   S+ PD+  
Sbjct: 251 FPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASNQIRQVTDGRSNNTEPSWMPDNQT 310

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +V+ SD+ G+ QLY +  NG   +R++ +   +  D   SP G  +     +     I  
Sbjct: 311 LVYTSDQGGRPQLYKIDINGGAPERLTWEGSQNQ-DADVSPDGSFVVMVSSASGSQHIAK 369

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTP 434
                   ++L +    + P+ +P+G  +I+S  +    G+ L  +  +GR +  L  T 
Sbjct: 370 QDLATGSVQILTDTFLDETPSIAPNGTMVIYSSTQG--WGTILQLVSTDGRFKARLPATD 427

Query: 435 AYASDPQWVGFM 446
                P W  ++
Sbjct: 428 GQVKSPAWSPYL 439


>gi|224582567|ref|YP_002636365.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224467094|gb|ACN44924.1| translocation protein TolB precursor [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 434

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 97/439 (22%), Positives = 189/439 (43%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M      +       +   +HA V++       +  P+ +   K+         +  +V+
Sbjct: 4   MMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVA 63

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+      + +   W++LG   +V G+V         + ++L
Sbjct: 64  ADLRNSGKFNPLDRSRLPQQPATAQEV-QPTAWSALGIDAVVVGQVTPNPDGSYNIAYQL 122

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 123 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 181

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 182 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 238

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           + +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 239 SVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPT 298

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y M  NG   +RI+ +   +  D   S  G  +     + 
Sbjct: 299 WFPDSQTLAFTSDQAGRPQVYKMNINGGAAQRITWEGSQNQ-DADVSSDGKFMVMVSSNN 357

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 358 GQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 415

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 416 ARLPATDGQVKSPAWSPYL 434


>gi|163802041|ref|ZP_02195937.1| translocation protein TolB precursor [Vibrio sp. AND4]
 gi|159174182|gb|EDP58990.1| translocation protein TolB precursor [Vibrio sp. AND4]
          Length = 449

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 104/457 (22%), Positives = 199/457 (43%), Gaps = 31/457 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L L + ++ G   +  HA +++       +  P+++   K+   + L   +S V++
Sbjct: 1   MIKRLLLGMFVLLGSLTSVAHAALELVITDGIDSARPIAVVPFKWEGSEPLPTDISAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ +  +   Q   N   +  F  W  LG   L+TG + K  +    V ++L
Sbjct: 61  SDLQRSGKFSPVPTNKMPQTPFNESEV-NFDAWTGLGVDALLTGSIKKNEQGNFVVNYQL 119

Query: 131 WDVKDRKQIIGKK--------------------FFSSPASWRKIAHTISDDIYQSITGEK 170
            DV   +   GK                             R+ AH ISD +Y+ +TG++
Sbjct: 120 VDVVRGQLTGGKSKALGDGELVLSKDHILFNKVATVQGPRMREYAHRISDLVYEQLTGDR 179

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F +RI +V  +         L + D DG N R +  S+ Q L  P +SP+ +K+AY +
Sbjct: 180 GAFMTRIAYVVVN-DKDSFPYQLRISDYDGYNERLVLRSK-QPLMSPAWSPDGKKLAYVS 237

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           + +     +++M+       ++I ++     AP+FS +G +  + + K  ++ +Y++DL+
Sbjct: 238 FQNGQA-EIFIMNIYTGE-REKITSYPRHNGAPKFSPDGSQLALVLSKTGSLQVYTLDLK 295

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +    ++T     N    + PD   ++F SDR GK Q+Y +        R++     +  
Sbjct: 296 TRKLSQITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYKVDLASGSTNRLTWQGSQNLG 355

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S   
Sbjct: 356 GQ-ITPDGRFLVMVNRSDSGFNLAKQDLETGALQVLTQTLLDESPSIAPNGGMVIYSSIY 414

Query: 411 DGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           +      L  + ++GR +  L  T      P W  F+
Sbjct: 415 NKKN--VLSMVSIDGRFKARLPATNGRVRAPAWSPFL 449


>gi|330502225|ref|YP_004379094.1| translocation protein TolB [Pseudomonas mendocina NK-01]
 gi|328916511|gb|AEB57342.1| translocation protein TolB [Pseudomonas mendocina NK-01]
          Length = 432

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 105/439 (23%), Positives = 209/439 (47%), Gaps = 15/439 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           ++I L  L++L+G          + ++  +   +P+++    +     L   +S+++  D
Sbjct: 5   IRIALLGLVMLVGSV---QAADPLVISQGADRATPIAVVPFGWQGGSVLPEDMSQIIGND 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  F  I + +     T    +  ++DW +LGAQ ++ G ++  G  RL+V++ L++
Sbjct: 62  LRNSGYFEPIPRQNMISLPTQASEVI-YRDWKALGAQYVLVGNIVPNG-GRLQVQYALFN 119

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKN 191
           V   +Q++           R +AH I+D  ++ +TG KG F++R+L+V+ E + +   + 
Sbjct: 120 VNTEQQVMTGNVGGGTDQLRDMAHHIADQSFEKLTGVKGAFSTRLLYVTAERMGANNTRY 179

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +L   D DGA    L  SR+ I   P F+P+ +++AY +++     R+++      R  +
Sbjct: 180 TLQRSDYDGARAVTLLQSREPI-LSPSFAPDGRRIAYVSFEQRRP-RIFVQHIDTGR-RE 236

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +I NF  +  AP +S +G R    + +D   +IY +D+ S    R+TN   I+    +  
Sbjct: 237 QITNFEGLNGAPAWSPDGNRLAFVLSRDGNPEIYVMDMGSRQMRRITNHYAIDTEPFWGK 296

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-- 369
           D   + F SDR G+ Q+Y    N    +R++     +  +P  S     +          
Sbjct: 297 DGQTLYFTSDRAGRPQIYKTNINSGAVERVTFVGNYNA-NPKLSADEKTLVMIHRQDGFT 355

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            F +     + ++ R+L + S  ++PT +P+G  LI++ ++ G     L     NGR   
Sbjct: 356 VFKVAAQDLETNRLRILSDTSLDESPTVAPNGTMLIYATRQQGRG--VLMLASTNGRVRL 413

Query: 430 LINTP-AYASDPQWVGFMD 447
            + T      +P W  +++
Sbjct: 414 PLPTAQGEVREPSWSPYLN 432


>gi|254000100|ref|YP_003052163.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Methylovorus sp. SIP3-4]
 gi|253986779|gb|ACT51636.1| Tol-Pal system beta propeller repeat protein TolB [Methylovorus sp.
           SIP3-4]
          Length = 424

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 110/412 (26%), Positives = 199/412 (48%), Gaps = 12/412 (2%)

Query: 34  AFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
           A + +         + IA   F         ++ VV  DL+RS +F ++       +  +
Sbjct: 21  AALTIEIVGGAAQQIPIAVVPFAKTPGAQDDIATVVGADLRRSGLFRVLETRGVVNQPHD 80

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
              + ++ +W ++ AQ L  G V      RL+V FRL DV  + Q+ G +F  + +  R 
Sbjct: 81  LPEV-KYPEWAAIQAQALTIGSVETLPGGRLKVSFRLLDVLKQNQLAGLEFNIAASQQRA 139

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            AH I+D IY+ +TGE G F++RI +++++      + +L V D DG N + +  S + +
Sbjct: 140 TAHKIADIIYEKLTGEPGVFSTRIAYITKTAG----RYALQVADADGFNPQTVMSSNEPV 195

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  PR+SP+  K+AY +Y+ +    +  + + +      + NF+    AP +S +G R  
Sbjct: 196 I-SPRWSPDGTKLAYVSYEKKKP--IVFVQSLVTGQRNVVANFKGNNSAPAWSPDGNRLA 252

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           I +       +Y ++      ++LT T  I+    ++PD S I F S R G  Q+Y M S
Sbjct: 253 IVLTHSANSQVYVINADGTGLKQLTYTTSIDTEPVWTPDGSAIYFTSSRGGGPQIYRMAS 312

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            G D KR++ D   +   P  SP G  +A+ K    KF + V      Q ++L + +  +
Sbjct: 313 TGGDAKRVTFDGNYNV-SPRISPDGKTLAYIKQDNGKFRVAVQDVASGQVQVLSDTAQDE 371

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
           +P+++P+GR ++++    G     L ++  +GR  + L  T     +P W  
Sbjct: 372 SPSFAPNGRMILYATSISGRGA--LAAVSADGRVKQRLSETGGDVREPAWGP 421


>gi|291616740|ref|YP_003519482.1| TolB [Pantoea ananatis LMG 20103]
 gi|291151770|gb|ADD76354.1| TolB [Pantoea ananatis LMG 20103]
          Length = 453

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 103/440 (23%), Positives = 196/440 (44%), Gaps = 13/440 (2%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVV 69
            MK  L + L      +   +HA V++       +  P+ +   K+         +  +V
Sbjct: 22  KMKQALRVTLGFFILLWAAVLHAEVRIEITQGVNSARPIGVVPFKWAGPGAAPEDIGGIV 81

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           + DL+ S  FN + +    Q+ T+   + +   W++LG   +V G++        +V ++
Sbjct: 82  AADLRNSGKFNPLDRSRLPQQPTSAQEV-QPAAWSALGIDAVVVGQIQPNADGSYQVSYQ 140

Query: 130 LWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           L D        +    +  +    R  AHT+SD+ +Q +TG KG F +RI +V ++   G
Sbjct: 141 LVDTAGAPGTVLAQNSYKITKQWLRYAAHTVSDEAFQKLTGIKGAFRTRIAYVVQTN-GG 199

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L V D DG N +++     Q L  P +SP+  KVAY T++        ++ T  +
Sbjct: 200 QFPYELRVADYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTFESGK--SALVIQTLSN 256

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+  + +   
Sbjct: 257 GAVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRYNSTEP 316

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++ PDS  + + SD+ G  Q+Y +  NG   +RI+ +   +    V S  G  +     S
Sbjct: 317 TWFPDSQTLAYTSDQAGAPQIYKIGINGGSPQRITWEGAQNQDADVAS-DGKSMVMISTS 375

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G    +          + L +    + P+ +P+G  +I+S  +    GS L  +  +GR 
Sbjct: 376 GGAQHVAKQDLVTGAVQTLTDTFLDETPSLAPNGTMVIYSSTQG--MGSVLQLVSTDGRF 433

Query: 428 E-TLINTPAYASDPQWVGFM 446
           +  L  T      P W  ++
Sbjct: 434 KARLPATDGQVKFPAWSPYL 453


>gi|16764118|ref|NP_459733.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|56414135|ref|YP_151210.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197363057|ref|YP_002142694.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|205352012|ref|YP_002225813.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856192|ref|YP_002242843.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|32699711|sp|Q8ZQT5|TOLB_SALTY RecName: Full=Protein tolB; Flags: Precursor
 gi|67461910|sp|Q5PCN2|TOLB_SALPA RecName: Full=Protein tolB; Flags: Precursor
 gi|226705890|sp|B5QX24|TOLB_SALEP RecName: Full=Protein tolB; Flags: Precursor
 gi|226705891|sp|B5R699|TOLB_SALG2 RecName: Full=Protein tolB; Flags: Precursor
 gi|226705892|sp|B5BC62|TOLB_SALPK RecName: Full=Protein tolB; Flags: Precursor
 gi|16419258|gb|AAL19692.1| tol protein required for outer membrane integrity [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|56128392|gb|AAV77898.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197094534|emb|CAR60054.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|205271793|emb|CAR36627.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|206707995|emb|CAR32284.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|261246011|emb|CBG23813.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|267992489|gb|ACY87374.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157339|emb|CBW16828.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|320085019|emb|CBY94808.1| Protein tolB Flags: Precursor [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|332987685|gb|AEF06668.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 430

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 98/428 (22%), Positives = 187/428 (43%), Gaps = 13/428 (3%)

Query: 24  IGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNL 81
               +   +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN 
Sbjct: 11  FLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNP 70

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQI 139
           + +    Q+      + +   W++LG   +V G+V         V ++L D        +
Sbjct: 71  LDRSRLPQQPATAQEV-QPTAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVL 129

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
               +  +    R   HT SD++++ +TG KG F +RI +V ++   G     L V D D
Sbjct: 130 AQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYD 188

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N +++     Q L  P +SP+  K+AY T++        ++ T  + A +++ +F   
Sbjct: 189 GYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANGAVRQVASFPRH 245

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F 
Sbjct: 246 NGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFT 305

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD+ G+ Q+Y M  NG   +RI+ +   +  D   S  G  +     +  +  I      
Sbjct: 306 SDQAGRPQVYKMNINGGAAQRITWEGSQNQ-DADVSSDGKFMVMVSSNNGQQHIAKQDLV 364

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYAS 438
               ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +  L  T     
Sbjct: 365 TGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVK 422

Query: 439 DPQWVGFM 446
            P W  ++
Sbjct: 423 SPAWSPYL 430


>gi|328473193|gb|EGF44041.1| translocation protein TolB [Vibrio parahaemolyticus 10329]
          Length = 450

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 102/458 (22%), Positives = 194/458 (42%), Gaps = 30/458 (6%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +  ++ L + ++        +    + +     +  P+++   K+     L   VS V++
Sbjct: 1   MTRRLLLGMFVLFSCMTNVANAALELVITDGIDSARPIAVVPFKWEGTQALPTDVSAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ +      Q   N   +  F  W SLG   L+TG + +  +    V ++L
Sbjct: 61  SDLQRSGKFSPVPTSKMPQTPFNESEV-NFDSWTSLGVDALLTGSIKQNEQGDYVVNYQL 119

Query: 131 WDVKDRKQ---------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            DV   +                      +  K         R+ AH ISD +Y+ +TGE
Sbjct: 120 VDVVRGQLTGGQSKALGSDGELVLSKDHVLFNKVATVKGPRMREYAHRISDLVYEQLTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V  +         L V D DG N R +  S+ Q L  P +SP+ QK+AY 
Sbjct: 180 RGAFMTRIAYVVVN-DKDRFPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGQKLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +++M+       ++I ++     APRFS +G +  + + K   + +Y+ DL
Sbjct: 238 SFQNGQA-EIFIMNIYTGE-REKITSYPRHNGAPRFSPDGNKLALVLSKTGTLQVYTFDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           ++    ++T +   N    + PD   ++F SDR GK Q+Y +        R++     + 
Sbjct: 296 KTRKLTQITRSRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLGSGSIDRLTWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   F +     +    ++L +    ++P+ +P+G  +++S  
Sbjct: 356 GGQ-ITPDGRFLVMVNRSDSGFNLAKQDLETGALQVLTKTLLDESPSIAPNGGMVVYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +      L  + ++GR +  L  T      P W  F+
Sbjct: 415 YNKKN--VLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|317047357|ref|YP_004115005.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Pantoea sp. At-9b]
 gi|316948974|gb|ADU68449.1| Tol-Pal system beta propeller repeat protein TolB [Pantoea sp.
           At-9b]
          Length = 431

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 97/439 (22%), Positives = 196/439 (44%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           MK  L + L      +   +HA V++          P+ +   ++         +  +V+
Sbjct: 1   MKQALRVTLGFFVLLWAAMLHAEVRIEITQGVNTARPIGVVPFQWAGPGAAPEDIGGIVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+ T+   + +   W++LG   +V G+V        ++ ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPTSAQQV-QPAAWSALGIDAVVVGQVTPNADGSYQIAYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R  AHT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 120 VDTGGAPGTVLAQNSYKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     + L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 179 FPYELRVSDYDGYN-QFVVHRSPEPLMSPTWSPDGSKLAYVTFESGK--SALVIQTLANG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+  + +   +
Sbjct: 236 AIRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLGSGQIRQITDGRYNSTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + + SD+ G  Q+Y +  NG   +RI+ +   +  D   +  G  +     +G
Sbjct: 296 WFPDSQTLAYTSDQAGAPQIYKIGINGGAPQRITWEGAQNQ-DADVAADGKSMVMISSAG 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               +     +    + L +    + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GAQHVAKQDLETGAVQTLTDTFLDETPSLAPNGTMVIYSSTQG--MGSVLQLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQVKSPAWSPYL 431


>gi|261252510|ref|ZP_05945083.1| TolB protein precursor [Vibrio orientalis CIP 102891]
 gi|260935901|gb|EEX91890.1| TolB protein precursor [Vibrio orientalis CIP 102891]
          Length = 438

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 107/446 (23%), Positives = 196/446 (43%), Gaps = 30/446 (6%)

Query: 23  LIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLI 82
           ++  F   +    + +     +  P++I   K+    +L   VS+V++ DLQRS  F+ I
Sbjct: 1   MMSVFQTANAALELVITDGIDSARPIAIVPFKWEGNSQLPEDVSKVIASDLQRSGKFSPI 60

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ---- 138
           +     Q   N   +  F  W  LG   LVTG + +  +    + ++L DV   +     
Sbjct: 61  ATSKMPQTPYNETEV-DFGAWTGLGVDALVTGSISQNAEGNYVINYQLVDVVRGQLTQGQ 119

Query: 139 -----------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                            +  K+        R+ AH ISD +Y+++TGEKG F +RI +V 
Sbjct: 120 SKALSDDGQLVLSKDHVMFNKRATVPGDRLREYAHRISDLVYEALTGEKGAFLTRIAYVV 179

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            S         L V D DG N R +  S+ Q L  P +SP+ +K+AY ++ +     +++
Sbjct: 180 VS-DKDQFPYQLRVSDYDGHNERLVLRSK-QPLMSPAWSPDGKKLAYVSFQNGQA-EIFI 236

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           M+       ++I ++     APRFS +G +  + + K  ++ +Y++DL++    ++T   
Sbjct: 237 MNIYTGE-REKISSYPRHNGAPRFSPDGSKLALVLSKTGSLQVYTLDLKTRKLTQITRGR 295

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             N    + PD   +VF SDR GK Q+Y +        RI+     +      +P G  +
Sbjct: 296 SNNTEPFWHPDGKSLVFTSDRGGKPQIYQVDLANGSTSRITWQGSQNLGGQ-ITPDGRFL 354

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                S   F +  +  +    + L +    ++P+ +P+G  +I+S   +    + L  +
Sbjct: 355 VMVNRSNSGFNLAKLDLETGAMQTLTKTLLDESPSIAPNGGMVIYSSTYN--KSNVLSMV 412

Query: 422 DLNGRNE-TLINTPAYASDPQWVGFM 446
            ++GR +  L  T      P W  F+
Sbjct: 413 SIDGRFKARLPVTNGRVRAPAWSPFL 438


>gi|221134414|ref|ZP_03560719.1| Periplasmic component of the Tol biopolymer transport system
           [Glaciecola sp. HTCC2999]
          Length = 455

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 108/453 (23%), Positives = 210/453 (46%), Gaps = 31/453 (6%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
            +L+  I        HA + +       N +P+++    +     L G++S+V++ DL+R
Sbjct: 9   TILITSILLCVAIKAHAQLNIVITEGVDNATPIAVVPFGWEGEGILPGELSDVINHDLRR 68

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  FN ++     Q   +  S+  +Q W   G   +V G+V + G DR +++F+L D + 
Sbjct: 69  SGRFNPMNMSQMPQFPRDISSV-NYQSWVDKGINTIVVGKVKELGGDRFQIDFQLIDTQA 127

Query: 136 RKQ--------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
             Q                    I G+    +   +R+  H ISD +Y+ +TG++G F +
Sbjct: 128 GSQLEKSGQMLLDGQLVAGQSQLIAGRTLTVTGRDFRQFGHRISDIVYEKLTGQRGAFLT 187

Query: 176 RILFVSESVVSGIIK-NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           RI +V+      + +   L + D DG N   L  S++  L  P +SP+  K+AY ++++ 
Sbjct: 188 RIAYVAVRDRETVARPYQLVIADYDGENELALLSSKEP-LMSPSWSPDGNKLAYVSFENG 246

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              ++++ D       K + +F  +  APRFS +GK+  + + KD   DIY +++ +   
Sbjct: 247 KP-QIFIQDIYTMSRVK-LTDFPGINGAPRFSPDGKKIAMVLSKDGNPDIYVMEIATRQL 304

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            R+T    I+   S++P+  ++VF S+R GK Q+Y +    +  KR++ + + +      
Sbjct: 305 TRVTRHRAIDTEPSWAPNGKELVFSSERGGKPQIYRVNLETNRIKRLTFEGDMNLGG-TI 363

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           +P G  +     +   + I     +    ++L      ++P+ +P+G  +I+S   +G  
Sbjct: 364 TPDGTELVVVNRTNGNYHIARQNLNDGAMQVLTTTFLDESPSIAPNGSMIIYSTLHEGTQ 423

Query: 415 GSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
              L  + L+GR +  L         P W  F+
Sbjct: 424 VLSL--VSLDGRFKARLPGVAGQIKAPSWSPFL 454


>gi|300715889|ref|YP_003740692.1| protein TolB (translocation of group A colicins) [Erwinia
           billingiae Eb661]
 gi|299061725|emb|CAX58841.1| Protein TolB (Translocation of group A colicins) [Erwinia
           billingiae Eb661]
          Length = 430

 Score =  390 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 99/445 (22%), Positives = 193/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + ++  LL V          HA V++          P+ +   K+         
Sbjct: 1   MKQAFRVAMSFLLLFV-------AVAHAEVRIEITQGVNTARPIGVVPFKWAGPGAAPED 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V+ DL+ S  FN + +    Q+ T    + +   W +LG   +V G+V        
Sbjct: 54  IGGIVAADLRNSGKFNPLDRSRLPQQPTTAAEV-QPAAWTALGIDAVVVGQVQPGADGSY 112

Query: 125 RVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D        +   ++  +    R  AHT SD+ ++ +TG KG F +RI +V +
Sbjct: 113 LVSYQLVDTSGNPGAILAQNQYKVTKQWLRYAAHTASDEAFEKLTGIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G     L V D DG N +       Q L  P +S +  K+AY T++        ++
Sbjct: 173 TN-GGQFPYELRVSDYDGYN-QNTVHRSPQPLMSPAWSKDGSKLAYVTFESGK--SALVV 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A K++ +F     AP FS +G +   ++ K  ++++Y +DL S    +LT+  +
Sbjct: 229 QTLANGAIKQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQINQLTDGRY 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +   ++ PDS  + + SD+ G+ Q+Y + ++G   +R++ +   +  D   S  G  + 
Sbjct: 289 NSTEPTWFPDSQSLAYTSDQAGRPQIYKISASGGTAQRLTWEGGQNQ-DADVSSDGKSLV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +G    +     +    + L +    + P+ +P+G  +I+S  +    GS L  + 
Sbjct: 348 MISTNGGAQHVARQDLETGAVQQLTDTFLDETPSLAPNGTMVIYSSTQG--MGSVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKFPAWSPYL 430


>gi|53804448|ref|YP_113693.1| translocation protein TolB [Methylococcus capsulatus str. Bath]
 gi|67461931|sp|Q609K4|TOLB_METCA RecName: Full=Protein tolB; Flags: Precursor
 gi|53758209|gb|AAU92500.1| tolB protein [Methylococcus capsulatus str. Bath]
          Length = 424

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 110/435 (25%), Positives = 212/435 (48%), Gaps = 12/435 (2%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +N    +   +  +       + A ++V  +      + +A   F +   L   +S++VS
Sbjct: 1   MNKARAIARWISFLLLIAAGQVCAELQVQISQGVEGAIPVAVVPFANQGSLSDSLSQIVS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F  +++ + +++ T PD + +   W +LG   +V G++   G      +F +
Sbjct: 61  ADLQRSGRFRTLAESAMQERPTAPDQVQQ-AAWQALGQDFVVVGQIRPSGDG-YEADFHV 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
            DV     ++  +     A  R+ AH I+D IY++ITGE G F +R+ +VS S      +
Sbjct: 119 VDVIRGTLVVSYRLPFGRAETRQAAHRIADVIYKAITGEPGAFATRVAYVSVSGEGANRR 178

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L V D DG N + +  S + I   P +SP+  K+AY +++      +Y+         
Sbjct: 179 YNLQVADTDGYNPQSVIVSNEPI-MSPAWSPDGTKIAYVSFESRRSA-IYVQTLATGE-R 235

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +++ +   +  AP FS +G R  +++ KD   DIY ++L S    R+T+   I+   ++S
Sbjct: 236 RKVSDAPGINGAPAFSPDGSRLALTLSKDGNPDIYVMNLGSGGLTRITDYSGIDTEPNWS 295

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D   IVF SDR GK QLY++ ++G   +R++ + + +    V+SP G  +A     G  
Sbjct: 296 RDGRSIVFTSDRGGKPQLYLVSASGGPAERLTYEGDYNARG-VFSPDGRSLAMVHGKGGD 354

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NET 429
           + I VM       R+L      ++P ++P+G  ++++ ++      +L ++ ++G+  ++
Sbjct: 355 YRIAVMDLASRAVRVLTSGPLDESPGFAPNGSMILYAARRG-----QLAAVSIDGKVRQS 409

Query: 430 LINTPAYASDPQWVG 444
           L        +P W  
Sbjct: 410 LRIEGGAVREPAWSP 424


>gi|146306309|ref|YP_001186774.1| translocation protein TolB [Pseudomonas mendocina ymp]
 gi|145574510|gb|ABP84042.1| TolB, N-terminal domain protein [Pseudomonas mendocina ymp]
          Length = 432

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 105/439 (23%), Positives = 209/439 (47%), Gaps = 15/439 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           ++I L  L++L+G          + ++  +   +P+++    +     L   +S+++  D
Sbjct: 5   IRIALLGLVMLVGSV---QAADPLVISHGADRATPIAVVPFGWQGGSVLPEDMSQIIGND 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  F  I + +     T    +  ++DW +LGAQ ++ G ++  G  RL+V++ L++
Sbjct: 62  LRNSGYFEPIPRQNMISLPTQASEVI-YRDWKALGAQYVLVGNIVPNG-GRLQVQYALFN 119

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKN 191
           V   +Q++           R +AH I+D  ++ +TG KG F++R+L+V+ E + +   + 
Sbjct: 120 VNTEQQVMTGNVGGGTDQLRDMAHHIADQSFEKLTGVKGAFSTRLLYVTAERMGANNTRY 179

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +L   D DGA    L  SR+ I   P F+P+ +++AY +++     R+++      R  +
Sbjct: 180 TLQRSDYDGARAVTLLQSREPI-LSPSFAPDGRRIAYVSFEQRRP-RIFVQHIDTGR-RE 236

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +I NF  +  AP +S +G R    + +D   +IY +D+ S    R+TN   I+    +  
Sbjct: 237 QITNFEGLNGAPAWSPDGNRLAFVLSRDGNPEIYVMDMGSRQMRRITNHYAIDTEPFWGK 296

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-- 369
           D   + F SDR G+ Q+Y    N    +R++     +  +P  S     +          
Sbjct: 297 DGQTLYFTSDRAGRPQIYKTNINSGAVERVTFVGNYNA-NPKLSADEKTLVMIHRQDGFT 355

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            F +     + ++ R+L + S  ++PT +P+G  LI++ ++ G     L     NGR   
Sbjct: 356 VFKVAAQDLETNRLRILSDTSLDESPTVAPNGTMLIYATRQQGRG--VLMLASTNGRVRL 413

Query: 430 LINTP-AYASDPQWVGFMD 447
            + T      +P W  +++
Sbjct: 414 PLPTAQGEVREPSWSPYLN 432


>gi|74318224|ref|YP_315964.1| translocation protein TolB [Thiobacillus denitrificans ATCC 25259]
 gi|119371065|sp|Q3SGT4|TOLB_THIDA RecName: Full=Protein tolB; Flags: Precursor
 gi|74057719|gb|AAZ98159.1| probable tolB-related transport protein [Thiobacillus denitrificans
           ATCC 25259]
          Length = 427

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 113/434 (26%), Positives = 217/434 (50%), Gaps = 14/434 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV-SIDELGGKVSEVVSK 71
           ++  L   L+ +G     + HA +++       + ++IA   F  +  +    ++++V+ 
Sbjct: 6   LRALLVFSLLCLGLSATRAAHAAMEIEVVGGAANKIAIAMVPFQTAAGQPSPPLTQIVAD 65

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  F++       Q +    S   +  W + GA+ +V G+V+  G  R  V FRL 
Sbjct: 66  DLARSGQFSMTDVTGAAQPV--EPSQVDYAAWRTKGAEAMVIGQVVALGGGRFEVRFRLL 123

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           DV    Q+ G  +  + A WR   H I+D +Y+ +TG  G F+SRI +V +       + 
Sbjct: 124 DVVKGTQLAGYSYKITAAQWRATGHRIADVVYEKLTGIPGAFSSRIAYVQKQG----KRY 179

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V D DG N R +  S + ++  P FSP+  ++AY +++D+  + VY+   +     +
Sbjct: 180 ELRVADADGQNPRTIVRSLEPLI-SPMFSPDGTRLAYVSFEDKKPV-VYVQSLQQGG-RR 236

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           ++  F+    AP +S +G++  + + +D A  IY +++  +   RL  +  I+    +SP
Sbjct: 237 KVAAFKGSNSAPAWSPDGRQLAVVLTRDGASQIYLINVDGSGLTRLMRSGDIDTEPVFSP 296

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   + F SDR G  Q+Y +  +G D KR+S +   +   P  SP G  +A+    G +F
Sbjct: 297 DGQTLYFTSDRGGSPQIYRVAKSGGDAKRVSFEGSYNV-SPTISPDGRYLAYISRDGGRF 355

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            + + +    Q R+L E +  +AP+++P+G++++++  + G     L ++ L+G+    +
Sbjct: 356 RVVLQELASGQTRVLTETTRDEAPSFAPNGQAVLYATVQGGRG--VLGTVTLDGKTRARL 413

Query: 432 NTPA-YASDPQWVG 444
           +     A +P W  
Sbjct: 414 SESGVDAREPAWGP 427


>gi|62179322|ref|YP_215739.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|75484379|sp|Q57RK3|TOLB_SALCH RecName: Full=Protein tolB; Flags: Precursor
 gi|62126955|gb|AAX64658.1| tol protein required for outer membrane integrity, uptake of group
           A colicins, and translocation of phage DNA to cytoplasm,
           may be part of multiprotein peptidoglycan recycling
           complex (Two domains) [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|322713793|gb|EFZ05364.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 430

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 96/428 (22%), Positives = 187/428 (43%), Gaps = 13/428 (3%)

Query: 24  IGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNL 81
               +   +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN 
Sbjct: 11  FLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNP 70

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQI 139
           + +    Q+      + +   W++LG   +V G+V         + ++L D        +
Sbjct: 71  LDRSRLPQQPATAQEV-QPTAWSALGIDAVVVGQVTPNPDGSYNIAYQLVDTGGAPGTVL 129

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
               +  +    R   HT SD++++ +TG KG F +RI +V ++   G     L V D D
Sbjct: 130 AQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYD 188

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N +++     Q L  P +SP+  K+AY T++        ++ T  + + +++ +F   
Sbjct: 189 GYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANGSVRQVASFPRH 245

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F 
Sbjct: 246 NGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFT 305

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD+ G+ Q+Y M  NG   +RI+ +   +  D   S  G  +     +  +  I      
Sbjct: 306 SDQAGRPQVYKMNINGGAAQRITWEGSQNQ-DADVSSDGKFMVMVSSNNGQQHIAKQDLV 364

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYAS 438
               ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +  L  T     
Sbjct: 365 TGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVK 422

Query: 439 DPQWVGFM 446
            P W  ++
Sbjct: 423 SPAWSPYL 430


>gi|268590336|ref|ZP_06124557.1| Tol-Pal system beta propeller repeat protein TolB [Providencia
           rettgeri DSM 1131]
 gi|291314245|gb|EFE54698.1| Tol-Pal system beta propeller repeat protein TolB [Providencia
           rettgeri DSM 1131]
          Length = 430

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 99/432 (22%), Positives = 191/432 (44%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           +++     + T   A +++       +  P+ +   K+        +V ++V  DL+ S 
Sbjct: 7   VVLGFLMLWATVAQAEIRIEITEGVNSAQPIGVVPFKWSGAGAPPQEVGQIVGADLRNSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-- 135
            FN I      Q+      +   + W +LG   +V G+V         V ++L DV    
Sbjct: 67  KFNPIEPSRMPQQPGTASEVI-PEAWTALGINAVVVGQVQPAADGSFVVSYQLVDVAANP 125

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              +   ++  +    R  AHT SD++++ +TG +G F +RI ++  +   G     L V
Sbjct: 126 GAVLSQNQYKVTKEWLRYAAHTASDEVFEKLTGIRGAFRTRIAYIVVN-KGGQYPYELRV 184

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N ++      + L  P +SP+ +K+AY T++        ++ T    A +++ +
Sbjct: 185 SDYDGFN-QFTVHRSPEPLMSPAWSPDGEKLAYVTFESGS--SALVIQTLSTGAVRQVAS 241

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   S+ PDS  
Sbjct: 242 FPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPSWMPDSQT 301

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +V+ SD+ G+ Q+Y M  NG   +R+S +   +  D   SP G  +      G +  +  
Sbjct: 302 LVYTSDQAGRPQIYKMNINGGSPERVSWEGTQNQ-DADVSPDGTFLVMVSSGGGQQHVAK 360

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTP 434
                +    L +    + P+ +P+G  +I+S  +   T  +L  +  +GR +  L  T 
Sbjct: 361 QDLATNNVEFLTKTFLDETPSIAPNGTMVIYSSSQGLGTILQL--VSTDGRFKARLPATD 418

Query: 435 AYASDPQWVGFM 446
                P W  ++
Sbjct: 419 GQVKFPAWSPYL 430


>gi|85058864|ref|YP_454566.1| translocation protein TolB [Sodalis glossinidius str. 'morsitans']
 gi|119371063|sp|Q2NUL4|TOLB_SODGM RecName: Full=Protein tolB; Flags: Precursor
 gi|84779384|dbj|BAE74161.1| colicin import protein TolB [Sodalis glossinidius str. 'morsitans']
          Length = 430

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 103/445 (23%), Positives = 189/445 (42%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +   LL       + + +HA V++          P+ +   K+         
Sbjct: 1   MKQAFRVALGFFLL-------WASVLHAEVRIEITQGVDTARPIGVVPFKWAGPGAAPED 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V+ DL+ S  FN +      Q+      +     W +LG   +V G+V        
Sbjct: 54  IGGIVAADLRNSGKFNPLDTSRLPQQPATASEV-TPPAWTALGIDAVVVGQVQPSAAGSY 112

Query: 125 RVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D        +   +F  +    R  AHT SD+ ++ +TG KG F +RI +V +
Sbjct: 113 VVSYQLVDTSGNPGSILAQNQFKVARKWLRYAAHTASDETFEKLTGIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G  +  L V D DG N +       Q L  P +SP+  K+AY T++        ++
Sbjct: 173 TN-GGQYRYELRVADYDGFN-QTPVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVI 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T    A +++ +F     AP FS +G +    + K   M++Y +DL S    ++T    
Sbjct: 229 QTLDSGAIRQVASFPQHNGAPAFSPDGSKLAFVLSKTGNMNLYVMDLGSGQVRQVTEGRS 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N   S+ PDS  + + SD+ G+ Q+Y    NG   +R+S +   +    V SP G  + 
Sbjct: 289 NNTEPSWFPDSQTLAYTSDQGGRPQVYKTNINGGTPQRLSWEGSQNQNADV-SPDGKFLV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +     I  +    +  ++L +    + P+ +P+G  +I+S  +    GS L  + 
Sbjct: 348 MVSTNNGAQHIAKLDLATNAVQVLTDTFLDETPSVAPNGTMVIYSATQG--LGSVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T     +P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKNPAWSPYL 430


>gi|254521375|ref|ZP_05133430.1| Tol-Pal system beta propeller repeat protein TolB [Stenotrophomonas
           sp. SKA14]
 gi|219718966|gb|EED37491.1| Tol-Pal system beta propeller repeat protein TolB [Stenotrophomonas
           sp. SKA14]
          Length = 439

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 113/440 (25%), Positives = 211/440 (47%), Gaps = 13/440 (2%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYS--PVSIAFTKFVSIDELGG-KVSEV 68
            M   L +   L+  F   +    + +     N S  P++I    +          V+ V
Sbjct: 3   KMPRWLAVFAALLLPFAAVAQQKGLDIDIIGGNASALPITIVPMPYQGSAAAPQTDVAGV 62

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V  DL+RS  F  + +    +K      I +F  W +L    +V GRV+  G    RVE+
Sbjct: 63  VRADLERSGQFRTLPEAQIVEKPVRGGDI-QFATWRALKQNYIVVGRVLDAGAGAYRVEY 121

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            L+DV   ++++G    +   + R +AH ++D IY+ ITG +G F +RI +V+ S     
Sbjct: 122 ELFDVPKGERLLGLAMTARGNAMRDVAHQMADAIYEKITGVRGAFWTRIAYVTASGKGDA 181

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           ++ +L V D DG N + +  S +  L  P +SP+  K+AY +++  +   +Y+ +     
Sbjct: 182 MRYALMVADSDGYNPQTIVRSAEP-LLSPSWSPDGSKLAYVSFERGNSA-IYIQNIATG- 238

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A + + +FR +  AP FS +G++  +++ +    +IY +DL S    +LTN   I+   +
Sbjct: 239 ARELVTSFRGINSAPAFSPDGRKLALTLSRSGNPEIYVMDLGSKQLTQLTNHFAIDTEPT 298

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++PD S + F SDR G+ Q+Y + + G   +R++     +   P  S  G  IA  + SG
Sbjct: 299 WAPDGSAVYFTSDRGGRPQVYKVGAGGGSAERVTFQGNYNA-KPTVSYDGKKIAVAQGSG 357

Query: 369 EKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             + I +M       R   L   S  ++P+++P+   ++++ ++ G     LY++  + R
Sbjct: 358 NSYKIAMMDSSLGSPRWSTLSPGSLDESPSFAPNASMVLYAAREGGRG--VLYAVSADAR 415

Query: 427 -NETLINTPAYASDPQWVGF 445
             + L+       +P W  +
Sbjct: 416 VRQRLVLADGDVREPAWSPY 435


>gi|322670511|gb|EFY66644.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322679677|gb|EFY75718.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322684847|gb|EFY80846.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
          Length = 431

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 98/439 (22%), Positives = 189/439 (43%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M      +       +   +H+ V++       +  P+ +   K+         +  +V+
Sbjct: 1   MMKQALRVAFGFLMLWAAVLHSEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+      + +   W++LG   +V G+V         V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPATAQEV-QPTAWSALGIDAVVVGQVTPNPDGSYNVAYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 120 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 179 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 236 AVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y M  NG   +RI+ +   +  D   S  G  +     + 
Sbjct: 296 WFPDSQTLAFTSDQAGRPQVYKMNINGGAAQRITWEGSQNQ-DADVSSDGKFMVMVSSNN 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQVKSPAWSPYL 431


>gi|322833831|ref|YP_004213858.1| Tol-Pal system beta propeller repeat protein TolB [Rahnella sp.
           Y9602]
 gi|321169032|gb|ADW74731.1| Tol-Pal system beta propeller repeat protein TolB [Rahnella sp.
           Y9602]
          Length = 430

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 101/428 (23%), Positives = 190/428 (44%), Gaps = 13/428 (3%)

Query: 24  IGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNL 81
           +   + + +HA V++          P+ +   K+         V  +V+ DL+ S  FN 
Sbjct: 11  LLMMWASVVHAEVRIEITQGVDTARPIGVVPFKWAGPGTPPEDVGGIVAADLRNSGKFNP 70

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQI 139
           I      Q+ T+   +     W +LG   +V G+V         V ++L D        +
Sbjct: 71  IDASRMPQQPTSAAEV-TPAAWTALGIDAVVIGQVQPAADGSYVVSYQLVDTSGAPGTVL 129

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
              ++  +    R  AHT SD++++ +TG KG F +RI ++ ++   G     L V D D
Sbjct: 130 AQNQYKVTKQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYIVQTN-GGKFPYELRVADYD 188

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N +++     + L  P +SP+  K+AY T++        ++ T  + A K+I +F   
Sbjct: 189 GYN-QFVVHRSPEPLMSPAWSPDGSKLAYVTFESGR--SALVVQTLANGAIKQIASFPRH 245

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP FS +G +   ++ KD ++++Y ++L S    ++TN    N   ++ PDS  + F 
Sbjct: 246 NGAPAFSPDGSKLAFALSKDGSLNLYVMNLSSGQISQVTNGRSNNTEPTWFPDSQNLAFT 305

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD+ G+ Q+Y +  NG   +R++ +   +  D   S  G  +     +     I  +   
Sbjct: 306 SDQGGRPQVYKVNINGGAPQRLTWEGSQNQ-DSDVSTDGKFLVMVSSASGTQHIAKLDLA 364

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYAS 438
               + L +    + P+ +P+G  +I+S  +    GS L  +  +GR +  L  T     
Sbjct: 365 TGAVQTLTDTFLDETPSLAPNGTMVIYSSSQG--LGSVLQLVSTDGRFKARLPATDGQVK 422

Query: 439 DPQWVGFM 446
            P W  ++
Sbjct: 423 FPAWSPYL 430


>gi|270263785|ref|ZP_06192054.1| protein TolB, precursor [Serratia odorifera 4Rx13]
 gi|270042669|gb|EFA15764.1| protein TolB, precursor [Serratia odorifera 4Rx13]
          Length = 430

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 96/445 (21%), Positives = 194/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +   +L       + + +HA V++       +  P+ +   K+         
Sbjct: 1   MKQAFRVALGFLIL-------WASVLHAEVRIEITQGVDSARPIGVVPFKWAGPGTPPED 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           + ++V  DL+ S  FN I      Q+ T+   +     W +LG   +V G+V        
Sbjct: 54  IGKIVGADLRNSGKFNPIDVARMPQQPTSASEV-TPAAWTALGIDAVVVGQVQPGADGGY 112

Query: 125 RVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            + ++L D        +   ++  +    R  AHT SD++++ +TG KG F +RI +V +
Sbjct: 113 LISYQLVDTSGSPGTVLAQNQYKVTKQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G     L V D DG N +++     + L  P +SP+  K+AY T++        ++
Sbjct: 173 TN-GGKFPYELRVADYDGYN-QFVVHRSPEPLMSPAWSPDGSKLAYVTFESGR--SALVV 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A ++I +F     AP FS +G R   ++ K  ++++Y ++L S    ++T+   
Sbjct: 229 QTLANGAIRQIASFPRHNGAPAFSPDGSRLAFALSKSGSLNLYVMNLGSGQITQITDGRS 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N   ++ PD   + + SD+ G+ Q+Y + ++G   +R++ +   +    V S  G  + 
Sbjct: 289 NNTEPTWFPDGQSLAYTSDQGGRPQIYKVSASGGASQRLTWEGSQNQDSEVSS-DGKFLV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +     I          ++L      + P+ +P+G  +I+S  +    GS L  + 
Sbjct: 348 MVSSNSGAQHIAKQDLGSGAVQVLTGTFLDETPSIAPNGTMVIYSSTQG--MGSVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKFPAWSPYL 430


>gi|319762343|ref|YP_004126280.1| tol-pal system beta propeller repeat protein tolb [Alicycliphilus
           denitrificans BC]
 gi|330825736|ref|YP_004389039.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Alicycliphilus denitrificans K601]
 gi|317116904|gb|ADU99392.1| Tol-Pal system beta propeller repeat protein TolB [Alicycliphilus
           denitrificans BC]
 gi|329311108|gb|AEB85523.1| Tol-Pal system beta propeller repeat protein TolB [Alicycliphilus
           denitrificans K601]
          Length = 440

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 112/426 (26%), Positives = 195/426 (45%), Gaps = 14/426 (3%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFN 80
           +  +         A  +V       + + IA        +   K+S +V  DL+RS  F 
Sbjct: 25  VAALAAGSTLPALAQFRVEITGVGLTQLPIAIAPLRGEAQSPQKISAIVQADLERSGRFT 84

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
            +          +  S P    W    A  L TG V +    R  V FRLWDV   + + 
Sbjct: 85  GVDATGV---ALDETSRPDLSQWRQRKADALSTGSVTRLADGRFDVRFRLWDVVKGQDLG 141

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G+ F  + A  R +AH I+D IY+ +TGE+G F++RI +V++       + SL V D DG
Sbjct: 142 GQSFTVTQADLRLVAHRIADFIYEKLTGERGVFSTRIAYVTKVGA----RYSLWVADADG 197

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N +    S + I+  P +SP+  ++AY +++    + VY+ D    R  + I NFR   
Sbjct: 198 ENAQSALSSPEPII-SPAWSPSGAQLAYVSFESRKPV-VYVHDVATGR-RRLIANFRGSN 254

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            AP +S +G+   +++ +D    +Y++D       RL  +  I+   ++S D   I F S
Sbjct: 255 SAPAWSPDGRTLAVTLSRDGGSQLYTIDANGGEPRRLMQSSGIDTEPAFSSDGRSIYFVS 314

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           DR G  Q+Y + + G + +R++ +   +   P  SP G  +A+    G  F + VM    
Sbjct: 315 DRGGSPQIYRVAAGGGNAERVTFNGAYN-ISPAISPDGQWLAYISRVGGAFKLHVMDLRS 373

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASD 439
                L + S  ++P+++P+ R ++++ ++ G     L +  L+G+    L        +
Sbjct: 374 GSVTALTDSSADESPSFAPNSRLILYATQQQGR--EALMTTTLDGKIKARLAGQGGDIRE 431

Query: 440 PQWVGF 445
           P W  F
Sbjct: 432 PDWGPF 437



 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 75/185 (40%), Gaps = 11/185 (5%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R     +      ++  D      +   ++    IS ++SP  +Q+ + S    K  +Y
Sbjct: 176 TRIAYVTKVGARYSLWVADADGENAQSALSSPEPIISPAWSPSGAQLAYVSFESRKPVVY 235

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V       ++R+  +   S   P WSP G  +A T        +  +  +G + R L++ 
Sbjct: 236 VHDVATG-RRRLIANFRGSNSAPAWSPDGRTLAVTLSRDGGSQLYTIDANGGEPRRLMQS 294

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQ 441
           S +   P +S  GRS+ F   + G    ++Y +   G N   +        +PA + D Q
Sbjct: 295 SGIDTEPAFSSDGRSIYFVSDRGGS--PQIYRVAAGGGNAERVTFNGAYNISPAISPDGQ 352

Query: 442 WVGFM 446
           W+ ++
Sbjct: 353 WLAYI 357



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 47/140 (33%), Gaps = 8/140 (5%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I FVS+   S      +  +   G N   +T         P  SP+ Q +AY +     
Sbjct: 309 SIYFVSDRGGSP----QIYRVAAGGGNAERVT-FNGAYNISPAISPDGQWLAYIS-RVGG 362

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             ++++MD R            S   +P F+ N +  L + Q+     + +  L      
Sbjct: 363 AFKLHVMDLRSGSVTAL--TDSSADESPSFAPNSRLILYATQQQGREALMTTTLDGKIKA 420

Query: 296 RLTNTLFINISASYSPDSSQ 315
           RL           + P   Q
Sbjct: 421 RLAGQGGDIREPDWGPFQKQ 440


>gi|326423958|ref|NP_761028.2| Tol-Pal system beta propeller repeat-containing protein TolB
           [Vibrio vulnificus CMCP6]
 gi|319999336|gb|AAO10555.2| Tol-Pal system beta propeller repeat protein TolB [Vibrio
           vulnificus CMCP6]
          Length = 449

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 108/438 (24%), Positives = 193/438 (44%), Gaps = 31/438 (7%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
            +A +++       +  P++I   K+     L   +S VV+ DLQRS  F+ +      Q
Sbjct: 20  ANAALELIITDGIDSARPIAIVPFKWQGTKALPVDISSVVASDLQRSGKFSPVPTSKMPQ 79

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ----------- 138
              N   I  F  W +LG   L+TG V +  K    + ++L DV   +            
Sbjct: 80  TPYNESEI-NFDAWTNLGVDTLLTGSVTQNEKGEYVINYQLVDVVRGQLTSGQSRALEDG 138

Query: 139 ---------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
                    +  K    +    R+ AH ISD IY+ +TGE+G F +RI +V  +      
Sbjct: 139 QLVLSKDHVLFNKVATITAPRMREYAHRISDLIYEQLTGERGAFLTRIAYVVVN-DKDKF 197

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L V D DG N R +  S+ Q L  P +SP+ +++AY ++ +     +++++      
Sbjct: 198 PYQLRVADYDGFNERLVLRSK-QPLMSPAWSPDGRRLAYVSFQNGQA-EIFVLNIYTGEH 255

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +++ +F     APRFS +GK+  I + K  ++ IY++DLQ+    ++T     N    +
Sbjct: 256 -EKLTSFPRHNGAPRFSPDGKKLAIVLSKTGSLQIYTLDLQTRQLTQITRDRSNNTEPFW 314

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PD   ++F SDR GK Q+Y +  +     R++     +      +P G  +     S  
Sbjct: 315 HPDGKSLIFTSDRGGKPQIYRVNLSDGSTSRLTWQGSQNLGGQ-ITPDGRFLIMVNRSDS 373

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE- 428
            F +     +    ++L +    ++P+ +P+G  +I+S   D      L  + ++GR + 
Sbjct: 374 GFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGMVIYSSIYDKKN--VLSMVSIDGRFKA 431

Query: 429 TLINTPAYASDPQWVGFM 446
            L  T      P W  F+
Sbjct: 432 RLPATNGRVRAPAWSPFL 449


>gi|190575562|ref|YP_001973407.1| translocation protein TolB [Stenotrophomonas maltophilia K279a]
 gi|190013484|emb|CAQ47119.1| putative tolB protein precursor [Stenotrophomonas maltophilia
           K279a]
          Length = 439

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 113/440 (25%), Positives = 211/440 (47%), Gaps = 13/440 (2%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYS--PVSIAFTKFVSIDELGG-KVSEV 68
            M   L +   L+  F   +    + +     N S  P++I    +          V+ V
Sbjct: 3   KMPRWLAVFAALLLPFAAVAQQKGLDIDIIGGNASALPITIVPMPYQGSSAAPQTDVAGV 62

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V  DL+RS  F  + +    +K      I +F  W +L    +V GRV+  G    RVE+
Sbjct: 63  VRADLERSGQFRTLPEAQIVEKPVRGGDI-QFATWRALKQNYIVVGRVLDAGAGAYRVEY 121

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            L+DV   ++++G    +   + R +AH ++D IY+ ITG +G F +RI +V+ S     
Sbjct: 122 ELFDVPKGERLLGLAMTARGNAMRDVAHQMADAIYEKITGVRGAFWTRIAYVTASGKGDA 181

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           ++ +L V D DG N + +  S +  L  P +SP+  K+AY +++  +   +Y+ +     
Sbjct: 182 MRYALMVADSDGFNPQTIVRSAEP-LLSPSWSPDGSKLAYVSFERGNSA-IYIQNIGTG- 238

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A + + +FR +  AP FS +G++  +++ +    +IY +DL S    +LTN   I+   +
Sbjct: 239 ARELVTSFRGINSAPAFSPDGRKLALTLSRSGNPEIYVMDLGSKQLTQLTNHFAIDTEPT 298

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++PD S + F SDR G+ Q+Y + + G   +R++     +   P  S  G  IA  + SG
Sbjct: 299 WAPDGSAVYFTSDRGGRPQVYKVGAGGGSAERVTFQGNYNA-KPSVSYDGKKIAVAQGSG 357

Query: 369 EKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             + I +M       R   L   S  ++P+++P+   ++++ ++ G     LY++  + R
Sbjct: 358 NSYKIAMMDSSLGSPRWSTLSPGSLDESPSFAPNASMVLYAAREGGRG--VLYAVSADAR 415

Query: 427 -NETLINTPAYASDPQWVGF 445
             + L+       +P W  +
Sbjct: 416 VRQRLVLADGDVREPAWSPY 435


>gi|152969308|ref|YP_001334417.1| translocation protein TolB [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|150954157|gb|ABR76187.1| translocation protein TolB precursor [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 418

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 191/426 (44%), Gaps = 13/426 (3%)

Query: 26  GFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLIS 83
             +   +HA V++       +  P+ +   ++         V  +V+ DL+ S  FN + 
Sbjct: 1   MLWAAVLHAEVRIEITQGVDSARPIGVVPFQWAGQGAAPEDVGGIVAADLRNSGKFNPLD 60

Query: 84  QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIG 141
           +    Q+ T+   + +   W++LG   +V G+V +      +V ++L D        +  
Sbjct: 61  RSRLPQQPTSAQEV-QPAAWSALGIDAVVVGQVTQNPDGSYQVAYQLVDTGGAPGTTLAQ 119

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             F  +    R  AH  SD +++ +TG KG F +RI +V +    G     L V D DG 
Sbjct: 120 GSFKVTKQYLRYAAHAASDAVFEKLTGIKGAFRTRIAYVVQKN-GGQYPYELRVSDYDGY 178

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N ++L     Q L  P +SP+  K+AY T++        ++ T  + + ++I +F     
Sbjct: 179 N-QFLVHRSSQPLMSPAWSPDGSKLAYVTFESGR--SALVVQTLANASVRQIASFPQHNG 235

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +   ++ K  ++++Y +DL S    ++TN    N   S+ PDS  + F SD
Sbjct: 236 APAFSPDGSKLAFALSKTGSLNLYVMDLGSGQIRQVTNGRSNNTEPSWFPDSQNLAFTSD 295

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           + G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G +  I     +  
Sbjct: 296 QAGRPQVYKVNINGGTPQRITWEGSQNQ-DADVSADGKTMVMVSSAGGQQHIAKQDLETG 354

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDP 440
             ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +  L  T      P
Sbjct: 355 GVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVKSP 412

Query: 441 QWVGFM 446
            W  ++
Sbjct: 413 AWSPYL 418


>gi|308049998|ref|YP_003913564.1| Tol-Pal system beta propeller repeat protein TolB [Ferrimonas
           balearica DSM 9799]
 gi|307632188|gb|ADN76490.1| Tol-Pal system beta propeller repeat protein TolB [Ferrimonas
           balearica DSM 9799]
          Length = 454

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 109/449 (24%), Positives = 213/449 (47%), Gaps = 29/449 (6%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSAN--YSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDV 78
            + +         A +++          PV++    +     +  ++S+VV+ DL RS  
Sbjct: 12  ALAMVLLVSMPARATLEIVITEGVNAARPVAVVPFVWEGPGPMPEQISDVVTSDLARSGS 71

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           FN +      Q   + ++    + W + GA+ +V G+V ++G D+ +V F L D+   + 
Sbjct: 72  FNPLPVTQLPQTAISNEAQMDLEAWVNTGAEAVVVGKVSQQGADQFKVVFELVDLIRAQA 131

Query: 139 --------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
                               I G++   S A +R+  H ISD +Y+++TG KG F ++I 
Sbjct: 132 TGGDTQGFDGNGLVKTNDHIIEGRETVISKAQFRQYGHRISDLVYEALTGVKGAFLTKIA 191

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +V+    +   K  L V D DG N   L  SR+  L  P +SP+ +K+AY ++++     
Sbjct: 192 YVTVDESAAPFKFQLRVADYDGYNETVLLRSREP-LMSPSWSPDGRKLAYVSFENRRS-E 249

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +Y+ D    +  +R+ +F  +  +P +S +GK+  +++ KD + +IY++DL + A +R+T
Sbjct: 250 IYVQDLYT-QQRERVTSFAGINGSPSWSPDGKQLAMTLSKDGSSEIYTLDLATRALKRIT 308

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           N   I+   +++PD   +VF S+R G+ Q+Y +  +    +R++   E +      +P G
Sbjct: 309 NHYAIDTEPTWAPDGKSLVFTSERGGRPQIYRVYLDSGRIQRLTFQGEWNLGG-SMTPDG 367

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +     +  KF I  M+       +L E    ++P+ +P+G  +I+    +G     L
Sbjct: 368 RYLVMVNRTNGKFNIARMELSTGYMDVLTETYLDESPSVAPNGSMIIYGTTHNGRQ--VL 425

Query: 419 YSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            ++ ++GR +  L         P W  F+
Sbjct: 426 AAVSMDGRFKARLPVQVGNVKAPAWSPFL 454


>gi|213969191|ref|ZP_03397330.1| translocation protein TolB [Pseudomonas syringae pv. tomato T1]
 gi|213926189|gb|EEB59745.1| translocation protein TolB [Pseudomonas syringae pv. tomato T1]
          Length = 416

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 105/416 (25%), Positives = 203/416 (48%), Gaps = 12/416 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           + V + S   +P+++    +   + L   ++E+VS DL+ S  +  I + +     T   
Sbjct: 9   ILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIVSNDLRNSGYYAPIPKQNMISLPTQAS 68

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
            +  F+DW +LGAQ ++ G +   G  RL++++ L++V   +Q++      +    R +A
Sbjct: 69  EVI-FRDWKALGAQYVMVGNITPAG-GRLQIQYALFNVATEQQVLTGNVSGTNDQLRDMA 126

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVS-GIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           H I+D  ++ +TG KG F++R+L+V+    S    + +L   D DGA    L  SR+ I 
Sbjct: 127 HYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNTRYTLQRSDYDGARAVTLLQSREPI- 185

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             PRF+P+ +++AY +++ +   R+++      R  ++I NF  +  AP +S +G +   
Sbjct: 186 LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR-REQITNFEGLNGAPAWSPDGSKLAF 243

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + KD   +IY ++L S    R+TN   I+    +  D S + F SDR GK Q+Y    N
Sbjct: 244 VLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFFGKDGSTLYFTSDRGGKPQIYKTNIN 303

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNL 392
           G   +R++     +  +P  S     +           F + V        ++L + +  
Sbjct: 304 GGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDGFTNFKVAVQDLARGSVKILTDSNLD 362

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFMD 447
           ++PT +P+G  +I++ ++ G     L  + +NGR    + T      +P W  +++
Sbjct: 363 ESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRVRLPLPTAQGEVREPSWSPYLN 416


>gi|156934765|ref|YP_001438681.1| translocation protein TolB [Cronobacter sakazakii ATCC BAA-894]
 gi|156533019|gb|ABU77845.1| hypothetical protein ESA_02605 [Cronobacter sakazakii ATCC BAA-894]
          Length = 431

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 98/439 (22%), Positives = 190/439 (43%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M      L       +   +HA V++       +  P+ +   K+         +  +V+
Sbjct: 1   MMKQALRLAFSFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+      + +   W++LG   +V G+V   G     V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPATAQEV-QPAAWSALGIDAVVVGQVTPNGDGSYTVAYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 120 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 179 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+    N   +
Sbjct: 236 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + + SD+ G+ Q+Y +  NG   +R++ +   +  D   S  G  +     +G
Sbjct: 296 WYPDSQTLAYTSDQAGRPQVYKVNINGGAPQRVTWEGSQNQ-DADISSDGKFMVMVSSNG 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               I  +       + L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GAQNIAKLDLATGGVQTLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQVKSPAWSPYL 431


>gi|157369522|ref|YP_001477511.1| translocation protein TolB [Serratia proteamaculans 568]
 gi|166988079|sp|A8GB93|TOLB_SERP5 RecName: Full=Protein tolB; Flags: Precursor
 gi|157321286|gb|ABV40383.1| Tol-Pal system beta propeller repeat TolB [Serratia proteamaculans
           568]
          Length = 430

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 96/445 (21%), Positives = 192/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +   +L       + + +HA V++       +  P+ +   K+         
Sbjct: 1   MKQAFRVALGFLIL-------WASVLHAEVRIEITQGVDSARPIGVVPFKWAGPGTPPED 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           + ++V  DL+ S  FN I      Q+ T    +     W +LG   +V G+V        
Sbjct: 54  IGKIVGADLRNSGKFNPIDVARMPQQPTTASEV-TPAAWTALGIDAVVVGQVQPGADGGY 112

Query: 125 RVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            + ++L D        +   ++  +    R  AHT SD++++ +TG KG F +RI +V +
Sbjct: 113 LISYQLVDTSGSPGTVLAQNQYKVTKQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G     L V D DG N ++      + L  P +SP+  K+AY T++        ++
Sbjct: 173 TN-GGKFPYELRVADYDGYN-QFTVHRSPEPLMSPAWSPDGSKLAYVTFESGR--SALVV 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A ++I +F     AP FS +G R   ++ K  ++++Y ++L S    ++T+   
Sbjct: 229 QTLANGAIRQIASFPRHNGAPAFSPDGSRLAFALSKSGSLNLYVMNLGSGQITQITDGRS 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N   ++ PD   + + SD+ G+ Q+Y + ++G   +R++ +   +    V S  G  + 
Sbjct: 289 NNTEPTWFPDGQSLAYTSDQGGRPQIYKVSASGGASQRLTWEGSQNQDSEVSS-DGKFLV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +     I          ++L      + P+ +P+G  +I+S  +    GS L  + 
Sbjct: 348 MVSSNSGAQHIAKQDLGSGAVQVLTGTFLDETPSIAPNGTMVIYSSTQG--MGSVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKFPAWSPYL 430


>gi|37525407|ref|NP_928751.1| translocation protein TolB [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|67461995|sp|Q7N6T6|TOLB_PHOLL RecName: Full=Protein tolB; Flags: Precursor
 gi|36784835|emb|CAE13748.1| TolB protein precursor [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 430

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 98/432 (22%), Positives = 190/432 (43%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           +++ I   + T  HA V++       +  P+ +   K+        ++  +V  DL+ S 
Sbjct: 7   VVLSILMLWVTVAHAEVRIEITQGVDSARPIGVVPFKWTGAGNAPEEIGAIVGADLRNSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR- 136
            FN I      Q+ T    +     W++LG   +V G++         + ++L D     
Sbjct: 67  KFNPIDISRMPQQPTTTSEV-TPAAWSALGIDAVVVGQIQPSADGGFLISYQLVDTASAP 125

Query: 137 KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
             ++ +  F     W R  AHT SD +++ +TG KG F +R+ ++ ++   G     L V
Sbjct: 126 GTVLAQDQFKVTKQWLRYAAHTASDQVFEKLTGIKGAFRTRLAYIVKTN-GGKYPYELRV 184

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N ++      + L  P +SP+  K+AY T++        ++ T      +++ +
Sbjct: 185 SDYDGYN-QFTVHRSPEPLMSPAWSPDGAKLAYVTFESGR--SALVIQTLASGEVRQVAS 241

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   S+ PD+  
Sbjct: 242 FPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMDLGSAQIRQITDGRSNNTEPSWMPDNQT 301

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +V+ SD+ G+ QLY    NG   +R++ +   +  D   S  G+ +        K  I  
Sbjct: 302 LVYTSDQGGRPQLYKTDINGGAPQRLTWEGTQNQ-DADVSADGNFVMMVSSESGKQHIAK 360

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTP 434
                   ++L +    + P+ +P+G  +I+S  +    G+ L  +  +GR +  L  T 
Sbjct: 361 QDLATGAVQILTDTFLDETPSIAPNGTMVIYSSTQG--LGTVLQLVSTDGRFKARLPATD 418

Query: 435 AYASDPQWVGFM 446
                P W  ++
Sbjct: 419 GQVKFPAWSPYL 430


>gi|237746665|ref|ZP_04577145.1| TolB protein [Oxalobacter formigenes HOxBLS]
 gi|229378016|gb|EEO28107.1| TolB protein [Oxalobacter formigenes HOxBLS]
          Length = 429

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 108/432 (25%), Positives = 202/432 (46%), Gaps = 17/432 (3%)

Query: 18  CLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
             L++    F      A   + +  +    + + +    F +      KV++++  DL R
Sbjct: 11  SFLVLGFSLFLAGKALAQEHLDIQISGVGATQIPVTIAGFANETVAPQKVTDIIRADLAR 70

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           + +F L+  D+         +   +  W + GA  LV G V K    ++ V +RL+D+  
Sbjct: 71  TGLFRLVGTDAIL----PESAFIDYPKWKANGADALVVGSVEKTADGKIDVRYRLFDLGK 126

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
             Q+      +     R  AH I+DDIY+ +TG KG F +RI +V ++      +  L +
Sbjct: 127 ASQLSALSMVAPAPMTRVTAHKIADDIYEKLTGIKGMFATRIAYVVKAGN----EYRLEI 182

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG   +    S++ I+  P +SP+  KVAY +++ +  + VY+ +  + RA   + N
Sbjct: 183 ADSDGEGRQLALRSKEPII-SPSWSPDGTKVAYVSFEAKKPV-VYVQNL-VTRARTVVAN 239

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           ++    AP +S +G +  +++ K+    IY+V+    +  +LT T  IN    +S D   
Sbjct: 240 YKGNNSAPSWSPDGTKLAVALSKNGYTQIYTVNANGGSLRQLTQTRSINTEPQFSADGKW 299

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           I F SDR G  Q+Y +  NG + +R++     +   P  SP G  +A+       F + +
Sbjct: 300 IYFTSDRSGGPQIYKIGVNGGNAQRVTFGSNYN-ISPRVSPDGKSLAYISRRNGGFQLYL 358

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTP 434
           M  +  QE  L + +  ++P++SP+G+ ++++          L  + ++GR  + L    
Sbjct: 359 MDLENGQEMRLSDTARDESPSFSPNGQFIMYAT--GSGRRGVLSVVSVDGRVRQRLTMKA 416

Query: 435 AYASDPQWVGFM 446
           A   +P W  FM
Sbjct: 417 ADVREPSWGPFM 428


>gi|238793897|ref|ZP_04637517.1| hypothetical protein yinte0001_25120 [Yersinia intermedia ATCC
           29909]
 gi|238726800|gb|EEQ18334.1| hypothetical protein yinte0001_25120 [Yersinia intermedia ATCC
           29909]
          Length = 413

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 100/420 (23%), Positives = 192/420 (45%), Gaps = 13/420 (3%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K++       ++  +V  DL+ S  FN I      Q
Sbjct: 2   LHAEVRIEITQGVDSARPIGVVSFKWMGPGTPPEEIGAIVGADLRNSGKFNPIDAARMPQ 61

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV--KDRKQIIGKKFFSS 147
           + +    +     W +LG   +V G+V         V ++L D        +   ++  +
Sbjct: 62  QPSTAAEV-TPAAWTALGIDAVVVGQVQPSADGSYVVSYQLVDTSGAAGSVLAQNQYKVT 120

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
               R  AHT SD++++ +TG KG F +RI +V ++   G   + L V D DG N +++ 
Sbjct: 121 KQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGKFPHELRVSDYDGYN-QFVV 178

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               + L  P +SP+  K+AY T++        ++ T  + A +++ +F     AP FS 
Sbjct: 179 HRSPEPLMSPAWSPDGSKIAYVTFESGK--SALVIQTLANGAIRQVASFPRHNGAPSFSP 236

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y +DL S    ++T+    N   S+ PDS  + + SD+ G+ Q
Sbjct: 237 DGTKLAFALSKSGSLNLYVMDLGSGQISQVTDGRSNNTEPSWFPDSQNLAYTSDQGGRPQ 296

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y +  NG   +RI+ +   +    V SP G  +A    +G    I     +    ++L 
Sbjct: 297 VYKVNINGGAPQRITWEGSQNQNADV-SPDGKFLALVSSNGGAQHIAKQDLETGAVQVLT 355

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           +    + P+ +P+G  +I+S  +    G+ L  +  +GR +  L  T      P W  ++
Sbjct: 356 DTFLDETPSIAPNGTMVIYSSTQG--LGAVLQLVSTDGRFKARLPATDGQVKFPAWSPYL 413


>gi|213051767|ref|ZP_03344645.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213427709|ref|ZP_03360459.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213857527|ref|ZP_03384498.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
 gi|289827213|ref|ZP_06545933.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
          Length = 431

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 98/439 (22%), Positives = 188/439 (42%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M      +       +   +HA V++       +  P+ +   K+         +  +V+
Sbjct: 1   MMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+      + +   W++LG   ++ G V         V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPATAQEV-QPTAWSALGIDAVIVGLVTPNPDGSYNVAYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 120 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 179 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 236 AVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y M  NG   +RI+ +   +  D   S  G  +     + 
Sbjct: 296 WFPDSQTLAFTSDQAGRPQVYKMNINGGAAQRITWEGSQNQ-DADVSSDGKFMVMVSSNN 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQVKSPAWSPYL 431


>gi|109899246|ref|YP_662501.1| TolB-like [Pseudoalteromonas atlantica T6c]
 gi|123360547|sp|Q15RP1|TOLB_PSEA6 RecName: Full=Protein tolB; Flags: Precursor
 gi|109701527|gb|ABG41447.1| TolB-like protein [Pseudoalteromonas atlantica T6c]
          Length = 451

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 114/455 (25%), Positives = 207/455 (45%), Gaps = 31/455 (6%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
            L  +L  +      S  A +++       +  P++I   K+    ++   +SEVVS DL
Sbjct: 3   RLTRVLTFLSVVLTASSQASLEIVITEGIDSARPIAIVPFKWNGPGQMPESLSEVVSGDL 62

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  F+ I       +  N + +  +  W + G + ++ G V  EG DR RV F L D 
Sbjct: 63  LRSGKFSPIDSTDMPGQPHNDNEL-DYSAWAATGVEAILVGSVTPEGPDRYRVNFTLVDA 121

Query: 134 KDRK--------------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
              +                     +  ++   +   +R+ AH ISD +Y+ +TGEKG F
Sbjct: 122 IRGQITGGNARALSGGKLTNSNDHILDSRQTVITGQGFRQYAHRISDVVYEKLTGEKGAF 181

Query: 174 NSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            +RI +V      +      L V D DG N   L  S++  L  P +SP+  K+AY T++
Sbjct: 182 MTRIAYVVVRDRKTNEFPYQLVVADYDGVNETMLLRSKEP-LMSPSWSPDGTKLAYVTFE 240

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           ++   ++Y+ D     +  ++ +F  +  AP FS NG++  + + KD   +IY +D+ S 
Sbjct: 241 NKRS-QIYIQDLYT-MSRTQMTDFPGINSAPVFSPNGRQLAMVLSKDGNPEIYVMDVASK 298

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             ER+T    I+   S++PD   ++F S+R GK Q+Y +    ++ +R++ D E +    
Sbjct: 299 RLERITRNRAIDTEPSWTPDGKSLIFSSERGGKPQIYRVDLASNNVRRVTFDGEMNLGG- 357

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             +P G  +     +   + I     +    ++L +    ++P+ +P+G  +I+S    G
Sbjct: 358 TITPDGGRMVMVNRTRGNYHIAAQDLENGNIQVLTKTYLDESPSIAPNGSMIIYSTLHQG 417

Query: 413 DTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
                L  + L+GR +  L  +      P W  F+
Sbjct: 418 KQVLSL--VSLDGRFKARLPASDGQVKSPSWSPFL 450


>gi|257095752|ref|YP_003169393.1| translocation protein TolB [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048276|gb|ACV37464.1| Tol-Pal system beta propeller repeat protein TolB [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 430

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 110/416 (26%), Positives = 196/416 (47%), Gaps = 13/416 (3%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
           S  A + +    A  + + +A  +F         V+ VV  DL+RS +F +I        
Sbjct: 25  SAQAQLTIEITGAGANRIPVAIAEFGGEASAARIVTSVVRADLERSGLFKMIDTSGA--- 81

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
                S P + +W S GA  L  G + +    R    FRL+DV     + G  F +S   
Sbjct: 82  AMTEASTPAYDEWKSRGADALAAGSIGEGADGRKEARFRLYDVNKAGVLGGSAFVTSKPM 141

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R   H I+D IY+ +TGE G F++R+ +V  +  S   +  L + D DG N +    S+
Sbjct: 142 LRATGHRIADIIYEKLTGEPGIFSTRVAYVVRASAS---RYELHIADADGQNAQVALISK 198

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           + I+  P +SP+  ++AY +++++    +  + +          NF+    AP +S +G+
Sbjct: 199 EPII-SPSWSPDGGRLAYVSFENKKP--IVYVHSLASGKRIVAANFKGSNSAPAWSPDGR 255

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +  + + KD    I++V+   +  +RLT    IN   ++SPD   + F SDR G  Q+Y 
Sbjct: 256 KLAVVLSKDGGSQIFTVNADGSGVQRLTTASAINTEPNFSPDGQYVYFTSDRGGSPQIYR 315

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +   G D +R+S +   +   P  SP G  +AF       F + VM     Q ++L +  
Sbjct: 316 VGVGGGDAQRVSFEGSYNVT-PRLSPDGKSMAFISRRDGSFRLSVMDLASKQVQVLTDSH 374

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
             ++P++SP+GR ++ + ++ G     L ++ ++GR  + L  +     +P W  F
Sbjct: 375 KDESPSFSPNGRMILIATEQGGRG--VLSAVSIDGRIKQRLSISAGDVREPAWSPF 428


>gi|91787860|ref|YP_548812.1| translocation protein TolB [Polaromonas sp. JS666]
 gi|118574592|sp|Q12C28|TOLB_POLSJ RecName: Full=Protein tolB; Flags: Precursor
 gi|91697085|gb|ABE43914.1| TolB-like protein [Polaromonas sp. JS666]
          Length = 426

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 113/429 (26%), Positives = 204/429 (47%), Gaps = 16/429 (3%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
            ++ +L  G  P    A  +V  +    + + IA   F    +   K+  +V  DL+RS 
Sbjct: 11  TVMSLLAAGLSP--AFAQFRVEVSGVGLTQLPIAIASFRGEVQAPQKIGNIVRADLERSG 68

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  +        + + ++ P    W   GA  +VTG V      R  V  RLWD+   +
Sbjct: 69  MFRPVDTAGI---VADENTRPDLAIWRQKGADAMVTGSVSPLADGRFDVRLRLWDIVRGQ 125

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
            + G+ +  + A  R  AH ISD +Y+ +TGEKG F++RI +V+++      + +L V D
Sbjct: 126 DLGGQSYTVAQADLRLSAHRISDFVYEKLTGEKGIFSTRIAYVTKT----AQRFNLWVAD 181

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG   +    S + I+  P +SPN  ++AY +++    + +Y  D    +  + + NFR
Sbjct: 182 SDGEGAQSALTSPEPII-SPSWSPNGSQLAYVSFESRKPV-IYAHDVATGK-RRLLANFR 238

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               AP +S +GK+ + ++ +D    IY++ L     +RLT +  I+   +YSPD   I 
Sbjct: 239 GSNSAPAWSPDGKQLVATLSRDGGSQIYALGLSGGDPKRLTQSSSIDTEPAYSPDGRYIY 298

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SDR G  Q+Y M   G + +R++     +   P  SP G  +A+    G  F + VM+
Sbjct: 299 FVSDRGGAPQIYRMSPGGGNPERVTFTGGYN-ISPAISPDGRWLAYVSRVGGAFKLHVME 357

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAY 436
                   + + +  ++P+++P+ R ++++ ++ G     L +  L+G+    L      
Sbjct: 358 LASGTATPITDTTADESPSFAPNSRLIVYATQQQGR--EALMTTTLDGKIKARLSGAGGD 415

Query: 437 ASDPQWVGF 445
             +P W  F
Sbjct: 416 IREPDWGPF 424



 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 13/186 (6%)

Query: 270 KRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R     +  +  +++  D     A   LT+   I IS S+SP+ SQ+ + S    K  +
Sbjct: 163 TRIAYVTKTAQRFNLWVADSDGEGAQSALTSPEPI-ISPSWSPNGSQLAYVSFESRKPVI 221

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y         +R+  +   S   P WSP G  +  T        I  +   G   + L +
Sbjct: 222 YAHDVATGK-RRLLANFRGSNSAPAWSPDGKQLVATLSRDGGSQIYALGLSGGDPKRLTQ 280

Query: 389 DSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDP 440
            S++   P +SP GR + F   + G    ++Y +   G N   +        +PA + D 
Sbjct: 281 SSSIDTEPAYSPDGRYIYFVSDRGG--APQIYRMSPGGGNPERVTFTGGYNISPAISPDG 338

Query: 441 QWVGFM 446
           +W+ ++
Sbjct: 339 RWLAYV 344


>gi|37680459|ref|NP_935068.1| translocation protein TolB [Vibrio vulnificus YJ016]
 gi|320155882|ref|YP_004188261.1| TolB protein , periplasmic protein involved in the tonb-independent
           uptake of group A colicins [Vibrio vulnificus MO6-24/O]
 gi|67461993|sp|Q7MJ87|TOLB_VIBVY RecName: Full=Protein tolB; Flags: Precursor
 gi|37199207|dbj|BAC95039.1| tol biopolymer transport system periplasmic component, TolB [Vibrio
           vulnificus YJ016]
 gi|319931194|gb|ADV86058.1| TolB protein precursor, periplasmic protein involved in the
           tonb-independent uptake of group A colicins [Vibrio
           vulnificus MO6-24/O]
          Length = 449

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 108/438 (24%), Positives = 193/438 (44%), Gaps = 31/438 (7%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
            +A +++       +  P++I   K+     L   +S VV+ DLQRS  F+ +      Q
Sbjct: 20  ANAALELIITDGIDSARPIAIVPFKWQGTKALPVDISSVVASDLQRSGKFSPVPTSKMPQ 79

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ----------- 138
              N   I  F  W +LG   L+TG V +  K    + ++L DV   +            
Sbjct: 80  TPYNESEI-NFDAWTNLGVDTLLTGSVTQNEKGEYVINYQLVDVVRGQLTSGQSRALEDG 138

Query: 139 ---------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
                    +  K    +    R+ AH ISD IY+ +TGE+G F +RI +V  +      
Sbjct: 139 QLVLSKDHVLFNKVATITAPRMREYAHRISDLIYEQLTGERGAFLTRIAYVVVN-DKDKF 197

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L V D DG N R +  S+ Q L  P +SP+ +++AY ++ +     +++++      
Sbjct: 198 PYQLRVADYDGFNERLVLRSK-QPLMSPAWSPDGRQLAYVSFQNGQA-EIFVLNIYTGEH 255

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +++ +F     APRFS +GK+  I + K  ++ IY++DLQ+    ++T     N    +
Sbjct: 256 -EKLTSFPRHNGAPRFSPDGKKLAIVLSKTGSLQIYTLDLQTRQLTQITRDRSNNTEPFW 314

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PD   ++F SDR GK Q+Y +  +     R++     +      +P G  +     S  
Sbjct: 315 HPDGKSLIFTSDRGGKPQIYRVNLSDGSTSRLTWQGSQNLGGQ-ITPDGRFLIMVNRSDS 373

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE- 428
            F +     +    ++L +    ++P+ +P+G  +I+S   D      L  + ++GR + 
Sbjct: 374 GFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGMVIYSSIYDKKN--VLSMVSIDGRFKA 431

Query: 429 TLINTPAYASDPQWVGFM 446
            L  T      P W  F+
Sbjct: 432 RLPATNGRVRAPAWSPFL 449


>gi|308186083|ref|YP_003930214.1| Protein tolB precursor [Pantoea vagans C9-1]
 gi|308056593|gb|ADO08765.1| Protein tolB precursor [Pantoea vagans C9-1]
          Length = 431

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 103/439 (23%), Positives = 195/439 (44%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           MK  L + L      +   +HA V++          P+ +   K+         V  +V+
Sbjct: 1   MKQALRVTLGFFILLWAAMLHAEVRIEITQGVNTARPIGVVPFKWAGAGAAPEDVGGIVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V        +V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPASAQEV-QPAAWSALGIDAVVVGQVASNPDGSYQVSYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R  AHT SD+ +Q +TG KG F +RI +V ++   G 
Sbjct: 120 VDTGGAPGTVLAQNSYKVTKQWLRYAAHTASDETFQKLTGIKGAFRTRIAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  KVAY T++        ++ T  + 
Sbjct: 179 FPYELRVADYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTFESGK--SALVVQTLSNG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ ++     AP FS +G +   ++ K  ++++Y +DL S  T ++T+  + +   +
Sbjct: 236 AIRQVASYPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQTRQVTDGRYNSTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + + SD+ G  Q+Y +  NG   +RI+ +   +    V +  G  +     SG
Sbjct: 296 WFPDSQTLAYTSDQAGAPQIYKVGLNGGTPQRITWEGGQNQDADVAT-DGKSMVMISTSG 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               +     +    + L +    + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GAQHVAKQDLETGAVQTLTDTFLDETPSLAPNGTMVIYSSTQG--MGSVLQLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQVKFPAWSPYL 431


>gi|121594093|ref|YP_985989.1| translocation protein TolB [Acidovorax sp. JS42]
 gi|120606173|gb|ABM41913.1| TolB, N-terminal domain protein [Acidovorax sp. JS42]
          Length = 443

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 109/428 (25%), Positives = 197/428 (46%), Gaps = 14/428 (3%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFN 80
           +  +    P S  A  +V       + + IA   F    +   K+S +V  DL+RS  F 
Sbjct: 28  IAALAASSPLSALAQFRVEITGVGLTQLPIAIAPFRGEPQSPQKISAIVQADLERSGRFL 87

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
            +          +  S P    W    A  L +G + +    R  V FRLWDV   + + 
Sbjct: 88  GVDASGV---ALDESSRPDLSLWRQRKADALTSGSITRLADGRFDVRFRLWDVVKAQDLG 144

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G+ F  + A  R +AH I+D +Y+ +TGE+G F++RI +V+++      + SL V D DG
Sbjct: 145 GQSFVVTQADLRLVAHRIADFVYEKLTGERGIFSTRIAYVTKAGS----RYSLWVADADG 200

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N +    S + I+  P ++P   ++AY +++    + VY+ D    R  + I NFR   
Sbjct: 201 ENAQSALSSPEPII-SPAWAPTGTQLAYVSFESRKPV-VYVHDVATGR-RRLIANFRGSN 257

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            AP +S +G+   +++ +D    +Y++D       RL  +  I+    +S D   I F S
Sbjct: 258 SAPAWSPDGRTLAVTLSRDGGSQLYTIDANGGEPRRLMQSSGIDTEPVFSSDGRSIYFVS 317

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           DR G  Q+Y + ++G   +R++ +   +   P  SP G  +A+    G  + + VM    
Sbjct: 318 DRGGSPQVYRVAASGGGAERVTFNGSYN-ISPSISPDGQWLAYISRVGGAYKLHVMDLKS 376

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASD 439
                + + S  + P+++P+ R ++++ ++ G     L +  L+G+    L        +
Sbjct: 377 GSVTAVTDTSADENPSFAPNSRLIVYATQQQGR--EALMTTTLDGKIKARLAGQGGDIRE 434

Query: 440 PQWVGFMD 447
           P W  F +
Sbjct: 435 PDWGPFQN 442


>gi|304395719|ref|ZP_07377602.1| Tol-Pal system beta propeller repeat protein TolB [Pantoea sp. aB]
 gi|304357013|gb|EFM21377.1| Tol-Pal system beta propeller repeat protein TolB [Pantoea sp. aB]
          Length = 431

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 103/439 (23%), Positives = 196/439 (44%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           MK  L + L      +   +HA V++          P+ +   K+         V  +V+
Sbjct: 1   MKQALRVTLGFFILLWAAMLHAEVRIEITQGVNTARPIGVVPFKWAGSGAAPEDVGGIVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+ T+   + +   W++LG   +V G+V        +V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPTSAQEV-QPAAWSALGIDAVVVGQVASNPDGSYQVSYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R  AHT SD+ +Q +TG KG F +RI +V ++   G 
Sbjct: 120 VDTGGAPGTVLAQNSYKVTKQWLRYAAHTASDETFQKLTGIKGAFRTRIAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  KVAY T++        ++ T  + 
Sbjct: 179 FPYELRVADYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTFESGK--SALVVQTLSNG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ ++     AP FS +G +   ++ K  ++++Y +DL S  T ++T+  + +   +
Sbjct: 236 AIRQVASYPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQTRQVTDGRYNSTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + + SD+ G  Q+Y +  NG   +RI+ +   +    V +  G  +     +G
Sbjct: 296 WFPDSQTLAYTSDQAGAPQIYKVGINGGTPQRITWEGGQNQDADVAT-DGKSMVMISTNG 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               +     +    + L +    + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GAQHVAKQDLETGAVQTLTDTFLDETPSLAPNGTMVIYSSTQG--MGSVLQLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQVKFPAWSPYL 431


>gi|206575815|ref|YP_002239638.1| Tol-Pal system beta propeller repeat protein TolB [Klebsiella
           pneumoniae 342]
 gi|290510464|ref|ZP_06549834.1| tol-Pal system beta propeller repeat protein TolB [Klebsiella sp.
           1_1_55]
 gi|226705885|sp|B5XZC1|TOLB_KLEP3 RecName: Full=Protein tolB; Flags: Precursor
 gi|206564873|gb|ACI06649.1| Tol-Pal system beta propeller repeat protein TolB [Klebsiella
           pneumoniae 342]
 gi|289777180|gb|EFD85178.1| tol-Pal system beta propeller repeat protein TolB [Klebsiella sp.
           1_1_55]
          Length = 430

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 104/428 (24%), Positives = 190/428 (44%), Gaps = 13/428 (3%)

Query: 24  IGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNL 81
               +   +HA V++       +  P+ +   ++         V  +V+ DL+ S  FN 
Sbjct: 11  FLMLWAAVLHAEVRIEITQGVDSARPIGVVPFQWAGQGAAPEDVGGIVAADLRNSGKFNP 70

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQI 139
           + +    Q+ T+   + +   W++LG   +V G+V        +V ++L D        +
Sbjct: 71  LDRSRLPQQPTSAQEV-QPAAWSALGIDAVVVGQVTSNPDGSYQVAYQLVDTGGAPGTTL 129

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
               F  +    R  AH  SD +++ +TG KG F +RI +V +    G     L V D D
Sbjct: 130 AQGSFKVTKQYLRYAAHAASDAVFEKLTGIKGAFRTRIAYVVQKN-GGQFPYELRVSDYD 188

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N ++L     Q L  P +SP+  K+AY T++        ++ T  + A ++I +F   
Sbjct: 189 GYN-QFLVHRSSQPLMSPAWSPDGSKLAYVTFESGR--SALVVQTLANGAVRQIASFPQH 245

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP FS +G +   ++ K  ++++Y +DL S    ++TN    N   S+ PDS  + F 
Sbjct: 246 NGAPAFSPDGSKLAFALSKTGSLNLYVMDLGSGQIRQVTNGRSNNTEPSWFPDSQNLAFT 305

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G +  I     +
Sbjct: 306 SDQAGRPQVYKVNINGGTPQRITWEGSQNQ-DADVSADGKTMVMVSSAGGQQHIAKQDLE 364

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYAS 438
               ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +  L  T     
Sbjct: 365 AGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVK 422

Query: 439 DPQWVGFM 446
            P W  ++
Sbjct: 423 SPAWSPYL 430


>gi|17545454|ref|NP_518856.1| translocation protein TolB [Ralstonia solanacearum GMI1000]
 gi|32699708|sp|Q8Y1F5|TOLB_RALSO RecName: Full=Protein tolB; Flags: Precursor
 gi|17427746|emb|CAD14265.1| probable protein tolb precursor [Ralstonia solanacearum GMI1000]
          Length = 432

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 120/449 (26%), Positives = 199/449 (44%), Gaps = 22/449 (4%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
            +R      L     + LL+VL  G       A + V    A  S   IA   F    ++
Sbjct: 1   MMRNVWKSGLRRSAWIGLLMVLCVGV----ARAQLYVEIAGAGSSQYPIAIANFQGESQI 56

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
              ++ +V  DL  S  F+ +        +      P    W S GA   V G V + G 
Sbjct: 57  PQDITAIVRADLVHSGRFSNVDVAGA---VVPDSPAPDLGAWKSRGAAAFVGGTVTRNG- 112

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
           DR  + FRL+D    + + G          R  AH I+D IYQ + G++G F +R+ +VS
Sbjct: 113 DRYEIRFRLYDTAKGESLGGLALTRGEGQLRLAAHEIADYIYQKLIGDRGVFATRLSYVS 172

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +       +  L + D DGAN +    S + I+  P +SP+  KVAY +++    + VY+
Sbjct: 173 KVG----RRYQLQISDSDGANPQVALTSNEPII-SPAWSPDGTKVAYVSFESRKPV-VYV 226

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D  I      I N +    AP +S +G+R  +++ +D    IY V+   +   RLT + 
Sbjct: 227 HDL-ISGRRAVISNQKGNNSAPAWSPDGRRVAVALSRDGNTQIYQVNADGSGLRRLTRSS 285

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQG 358
            I+   S+SPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G
Sbjct: 286 AIDTEPSFSPDGRSIYFTSDRGGAPQIYRMPTEGEDAGSAQRVTFKGGYN-TSPRVSPDG 344

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            L+A+    G  F + V          L + S  ++P+++ +G+ ++++ +  G   S L
Sbjct: 345 KLLAYISRVGGAFKLYVQDLSNGDVTGLTDTSYDESPSFAANGKFILYATRVGGR--SVL 402

Query: 419 YSIDLNGRNETLIN-TPAYASDPQWVGFM 446
            ++  +GR   +++       +P W  FM
Sbjct: 403 AAVSTDGRTRQILSLQAGTVREPAWGPFM 431


>gi|288936479|ref|YP_003440538.1| Tol-Pal system beta propeller repeat protein TolB [Klebsiella
           variicola At-22]
 gi|288891188|gb|ADC59506.1| Tol-Pal system beta propeller repeat protein TolB [Klebsiella
           variicola At-22]
          Length = 430

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 104/428 (24%), Positives = 190/428 (44%), Gaps = 13/428 (3%)

Query: 24  IGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNL 81
               +   +HA V++       +  P+ +   ++         V  +V+ DL+ S  FN 
Sbjct: 11  FLMLWAAVLHAEVRIEITQGVDSARPIGVVPFQWAGQGAAPEDVGGIVAADLRNSGKFNP 70

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQI 139
           + +    Q+ T+   + +   W++LG   +V G+V        +V ++L D        +
Sbjct: 71  LDRSRLPQQPTSAQEV-QPAAWSALGIDAVVVGQVTSNPDGSYQVAYQLVDTGGAPGTTL 129

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
               F  +    R  AH  SD +++ +TG KG F +RI +V +    G     L V D D
Sbjct: 130 AQGSFKVTKQYLRYAAHAASDAVFEKLTGIKGAFRTRIAYVVQKN-GGQFPYELRVSDYD 188

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N ++L     Q L  P +SP+  K+AY T++        ++ T  + A ++I +F   
Sbjct: 189 GYN-QFLVHRSSQPLMSPAWSPDGSKLAYVTFESGR--SALVVQTLANGAVRQIASFPQH 245

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP FS +G +   ++ K  ++++Y +DL S    ++TN    N   S+ PDS  + F 
Sbjct: 246 NGAPAFSPDGAKLAFALSKTGSLNLYVMDLGSGQIRQVTNGRSNNTEPSWFPDSQNLAFT 305

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G +  I     +
Sbjct: 306 SDQAGRPQVYKVNINGGTPQRITWEGSQNQ-DADVSADGKTMVMVSSAGGQQHIAKQDLE 364

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYAS 438
               ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +  L  T     
Sbjct: 365 AGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVK 422

Query: 439 DPQWVGFM 446
            P W  ++
Sbjct: 423 SPAWSPYL 430


>gi|186477204|ref|YP_001858674.1| translocation protein TolB [Burkholderia phymatum STM815]
 gi|226705871|sp|B2JGA0|TOLB_BURP8 RecName: Full=Protein tolB; Flags: Precursor
 gi|184193663|gb|ACC71628.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           phymatum STM815]
          Length = 430

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 203/444 (45%), Gaps = 21/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L ++  +   L+  GG    + HA + V       +   IA   F +      ++S
Sbjct: 3   LMTKLGLRALVASCLIAAGG----AAHAQLNVLVTGVGSTQFPIATANFANEANSPQQIS 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V +DLQRS  F  I   S      +         W + GA   V G V K    + +V
Sbjct: 59  TIVRQDLQRSGKFTNIDAGSAP---VSEGDSVDLGAWKAKGANAFVAGSVTKLPNGQYQV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F+L+D  +++ + G +  S     R  AH ++D IY  + G +G F +R+ +V ++   
Sbjct: 116 RFKLYDTVNQQSLGGLELVSPEGGLRMSAHKVADYIYAKLMGGRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG +      S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQDAHIALSSPEPII-SPAWSPDGTKVAYVSFEKKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G+   +++ +     I++V+   +   RLT    I+  
Sbjct: 230 GRRV-VVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
            SYSPD   I F SDR G+ Q+Y M ++G      +R++     +   P  SP G  +A+
Sbjct: 289 PSYSPDGQSIYFTSDRGGQPQIYKMPASGEASGGAQRVTFTGNYN-TSPRVSPDGKQLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +G  F + +          L + ++ ++P+++ +G+ ++++ + +G     L ++  
Sbjct: 348 ISRTGGGFKLYIQDLQSGVATALTDTTHDESPSFAANGQYILYATQVNGRG--VLAAVST 405

Query: 424 NGRNETLIN-TPAYASDPQWVGFM 446
           +GR   +++       +P W  FM
Sbjct: 406 DGRTRQVLSVQGGSVREPSWGPFM 429


>gi|261343492|ref|ZP_05971137.1| Tol-Pal system beta propeller repeat protein TolB [Providencia
           rustigianii DSM 4541]
 gi|282568638|gb|EFB74173.1| Tol-Pal system beta propeller repeat protein TolB [Providencia
           rustigianii DSM 4541]
          Length = 430

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 103/432 (23%), Positives = 186/432 (43%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           ++      + T   A +++       +  P+ +   K+        +V ++V  DL+ S 
Sbjct: 7   IVFGFLMLWATVAQAEIRIEITEGVNSAQPIGVVPFKWAGAGAPPQEVGQIVGADLRNSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-- 135
            FN I      Q+      +     W +LG   +V G+V         V ++L DV    
Sbjct: 67  KFNPIEPSRMPQQPGTASEVI-PDAWTTLGINAVVVGQVQPAADGSFVVSYQLVDVAANP 125

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              +   +F  +    R  AHT SD++++ +TG +G F +RI +V ++   G     L V
Sbjct: 126 GAVLAQNQFKVTKDWLRYAAHTASDEVFEKLTGIRGAFRTRIAYVVKTN-GGQYPFELRV 184

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N ++      + L  P +SP+ QK+AY T++        ++ T    A +++  
Sbjct: 185 SDYDGFN-QFTVHRSPEPLMSPAWSPDGQKIAYVTFESGS--SALVIQTLSSGAVRQVAK 241

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   S+ PDS  
Sbjct: 242 FPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPSWMPDSQT 301

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +V+ SD+ G+ Q+Y M  NG    R+S +   +  D   SP G  +      G +  I  
Sbjct: 302 LVYTSDQAGRPQVYKMNINGGSPVRVSYEGTQNQ-DADVSPDGTFLVMVSSGGGQQHIAK 360

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTP 434
                     L      + P+ +P+G  +I+S  +   T  +L  +  +GR +  L  T 
Sbjct: 361 QDLATGNVEYLTTTFLDETPSIAPNGTMVIYSSSQGLGTILQL--VSTDGRFKARLPATD 418

Query: 435 AYASDPQWVGFM 446
                P W  ++
Sbjct: 419 GQVKFPAWSPYL 430


>gi|94311607|ref|YP_584817.1| translocation protein TolB [Cupriavidus metallidurans CH34]
 gi|119371053|sp|Q1LJX8|TOLB_RALME RecName: Full=Protein tolB; Flags: Precursor
 gi|93355459|gb|ABF09548.1| periplasmic protein [Cupriavidus metallidurans CH34]
          Length = 446

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 101/418 (24%), Positives = 187/418 (44%), Gaps = 18/418 (4%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
           HA + V       +   +A   F    +    ++ ++  DL  S  F  +          
Sbjct: 42  HAQLNVEITGVGSNQFPVATANFQGEAQAPQNLTAIIRSDLTNSGRFRNVDPAGA---TV 98

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
              +      W + GA   V G V      +  V FRL+D    + + G  F  +    R
Sbjct: 99  AESAQVDLGSWKAKGADAFVAGSVTPTSNGQYEVRFRLYDTAKGQSLGGLAFTVTQGQLR 158

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
             AH I+D IY+ + GE+G F +R+ +VS+       +  L + D DG N +    S + 
Sbjct: 159 VTAHKIADYIYEKLLGERGVFATRLSYVSKVGN----RYQLLISDSDGQNAQIALTSTEP 214

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           I+  P +SP+ ++VAY +++ +  + VY+ D    +    + N +    AP +S +G+  
Sbjct: 215 II-SPAWSPDGRRVAYVSFEAKKPV-VYVHDLATGKRV-VVSNQKGNNSAPSWSPDGQHL 271

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +S+ +D    IY V+   +   RLT +  I+    +SPD   I F SDR G  Q+Y M 
Sbjct: 272 AVSLSRDGNTQIYQVNADGSGLRRLTRSSAIDTEPQFSPDGRSIYFTSDRGGAPQIYRMP 331

Query: 333 SNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++G      +R++     +   P  SP G  +A+   SG  F + +          L + 
Sbjct: 332 ASGEESGAAQRVTFKGSYNV-SPRISPDGKYLAYISRSGG-FRLQLQDLSNGDVTSLTDT 389

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVGFM 446
           +N ++P+++ +G+ ++++ +  G   S L ++  +GR + +++       +P W  FM
Sbjct: 390 TNDESPSFAANGKYILYATRVGGR--SVLAAVSTDGRTKQVLSLQSGAVREPSWGPFM 445


>gi|16759687|ref|NP_455304.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142540|ref|NP_805882.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|32699709|sp|Q8Z8C0|TOLB_SALTI RecName: Full=Protein tolB; Flags: Precursor
 gi|25513116|pir||AH0592 tolB protein precursor [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16501980|emb|CAD05210.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Typhi]
 gi|29138171|gb|AAO69742.1| tolB protein precursor [Salmonella enterica subsp. enterica serovar
           Typhi str. Ty2]
          Length = 430

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 97/428 (22%), Positives = 186/428 (43%), Gaps = 13/428 (3%)

Query: 24  IGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNL 81
               +   +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN 
Sbjct: 11  FLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNP 70

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQI 139
           + +    Q+      + +   W++LG   ++ G V         V ++L D        +
Sbjct: 71  LDRSRLPQQPATAQEV-QPTAWSALGIDAVIVGLVTPNPDGSYNVAYQLVDTGGAPGTVL 129

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
               +  +    R   HT SD++++ +TG KG F +RI +V ++   G     L V D D
Sbjct: 130 AQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYD 188

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N +++     Q L  P +SP+  K+AY T++        ++ T  + A +++ +F   
Sbjct: 189 GYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANGAVRQVASFPRH 245

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F 
Sbjct: 246 NGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFT 305

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD+ G+ Q+Y M  NG   +RI+ +   +  D   S  G  +     +  +  I      
Sbjct: 306 SDQAGRPQVYKMNINGGAAQRITWEGSQNQ-DADVSSDGKFMVMVSSNNGQQHIAKQDLV 364

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYAS 438
               ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +  L  T     
Sbjct: 365 TGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVK 422

Query: 439 DPQWVGFM 446
            P W  ++
Sbjct: 423 SPAWSPYL 430


>gi|312882597|ref|ZP_07742337.1| translocation protein TolB [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369757|gb|EFP97269.1| translocation protein TolB [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 454

 Score =  387 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 114/462 (24%), Positives = 207/462 (44%), Gaps = 34/462 (7%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK---VSE 67
           +N+K  +  L  L+  F   +  A +++       S   IA   F      G K   +SE
Sbjct: 1   MNIKRKIIQLFGLLVLFQSFAASAKLEIVITDGIDSARPIAILPFKWEGSAGQKPDNLSE 60

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD-RLRV 126
           V+S DL RS  F  +      +   +   I  F +W  LG   LVTG V  +    R  +
Sbjct: 61  VISSDLMRSGKFKPLDVSQMPETPYSVSDI-NFSEWTKLGVDALVTGTVGFDATKQRYVI 119

Query: 127 EFRLWDVKDRKQ---------------------IIGKKFFSSPASWRKIAHTISDDIYQS 165
            ++L D+   +                      ++ K+  ++ A  R +AH IS+ IY+ 
Sbjct: 120 NYQLVDIVRGQLTNGQAKSLSSDGELVLSQDYVLLNKRMTATSAQMRAVAHRISNRIYEQ 179

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +TGEKG F +RI +V            L V D DG N + +  SR Q L  P +SP+ ++
Sbjct: 180 LTGEKGAFETRIAYVVVK-DGDSYPYQLRVSDYDGFNEKLVLSSR-QPLMSPSWSPDGKQ 237

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +AY ++ +     +Y+MD    +  +++ ++     AP+FS +GK+  + + K   + +Y
Sbjct: 238 LAYVSFQNNKA-EIYIMDIYTGK-REKVTSYPRHNGAPKFSPDGKKLALVLSKTGNLQVY 295

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           ++D+ +    ++TN+   N    + PD   ++F SDR GK Q+Y +    +  KR++ + 
Sbjct: 296 TLDIATKRLTQITNSRSNNTEPFWYPDGKSLIFTSDRGGKPQIYNVDLATNATKRLTWEG 355

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +      +P G  I     S   F +  +  + +  ++L      ++P+ SP+G  +I
Sbjct: 356 SQNLGGQ-ITPDGRFIVMVNRSQSGFNLAKLDLETNSMQILTHTQLDESPSISPNGGMVI 414

Query: 406 FSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           +S   +    + L  + ++GR +  L  T      P W  F+
Sbjct: 415 YSSIYN--QTNVLSMVSIDGRFKARLPATNGRVRAPAWSPFL 454


>gi|121607999|ref|YP_995806.1| translocation protein TolB [Verminephrobacter eiseniae EF01-2]
 gi|121552639|gb|ABM56788.1| TolB, N-terminal domain protein [Verminephrobacter eiseniae EF01-2]
          Length = 421

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 109/427 (25%), Positives = 195/427 (45%), Gaps = 10/427 (2%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF 79
           +L  +         A  +V       + + IA   F    +   K++ +V  DL+RS  F
Sbjct: 1   MLAALIATPVLPALAQFRVEVTGVGLTQLPIALAPFRGQAQAPQKMAAIVQADLERSGQF 60

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
             +  D       +  + P    W    A  L+ G V      R  V FRLWDV   + +
Sbjct: 61  RAVDADGA---ALDETTRPDLALWRKKNADSLLAGSVALSSNGRFDVRFRLWDVVKGQDL 117

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            G+ F  +P   R +AH I+D I++ +TGE+G F++RI +V+ +      + SL V D D
Sbjct: 118 GGQSFLVTPGDLRLVAHRIADFIHEKLTGERGVFSTRIAYVTRTTNRTGARYSLWVADAD 177

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N +    S + I+  P +SP   ++AY +++    + VY+ D    R  + I NFR  
Sbjct: 178 GENAQSALSSPESII-SPAWSPLGDQLAYVSFESRKPV-VYVHDVASGR-RRLIANFRGS 234

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP ++ +G+   +++ +D    +Y++D       RL  +  I+   ++S D   I F 
Sbjct: 235 NSAPAWAPDGRTLAVTLSRDGGSQLYTIDANGGEPRRLMQSAGIDTEPAFSGDGRSIYFV 294

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SDR G  Q+Y +  +G D +R++     +   P  SP G  +A+   +G  F + VM   
Sbjct: 295 SDRGGAPQIYKVGVSGGDAERVTFTGNYN-ISPSVSPDGRWLAYISRAGGAFKLQVMDLV 353

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYAS 438
                 + + +  + P+++P+ R ++++ ++ G     L +  L+G+    L        
Sbjct: 354 SGSVNAITDTTADENPSFAPNSRLIVYATEQQGR--EALMTTTLDGKIKARLAGQAGDIR 411

Query: 439 DPQWVGF 445
           +P W  F
Sbjct: 412 EPDWGPF 418


>gi|258621415|ref|ZP_05716449.1| translocation protein TolB precursor [Vibrio mimicus VM573]
 gi|258626844|ref|ZP_05721651.1| translocation protein TolB precursor [Vibrio mimicus VM603]
 gi|258580891|gb|EEW05833.1| translocation protein TolB precursor [Vibrio mimicus VM603]
 gi|258586803|gb|EEW11518.1| translocation protein TolB precursor [Vibrio mimicus VM573]
          Length = 441

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 106/449 (23%), Positives = 201/449 (44%), Gaps = 32/449 (7%)

Query: 22  VLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF 79
           +LIG  F    +A +++       +  P++I   K+    +L   VS V++ DLQRS  F
Sbjct: 1   MLIGTGFTNVANAALELVITDGIDSARPIAIIPFKWEGGTKLPEDVSAVIASDLQRSGKF 60

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ- 138
           + +      Q   + + +  F  W SLG   L+TG + +  +    + ++L D+   +  
Sbjct: 61  SPVPTSKMPQTPYSEEQV-NFGKWTSLGVDSLLTGTITQNAEGSYVISYQLVDIVRGQLT 119

Query: 139 --------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
                               +  K     P+  R+ AH I+D +Y+ +TGE+G F +RI 
Sbjct: 120 QGQSKALSPDGQLVLSKDHVLFNKVATVPPSRMREYAHRIADLVYEELTGERGAFLTRIA 179

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +V  +         L + D DG N R +  S+ Q L  P +SP+ Q +AY ++ +     
Sbjct: 180 YVVVN-DKDPYPYQLRIADYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYVSFQNGQA-E 236

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +++M+    +  K + +F     APRFS +GK   + + K   + +Y++DL +   + +T
Sbjct: 237 IFMMNIYTGQRDK-LTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLKEVT 295

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +    N    + PD   ++F SDR GK Q+Y +  +    KR++     +      +P G
Sbjct: 296 SGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSDGATKRLTWQGSQNLGGQ-ITPDG 354

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +     S   F +  +  +    ++L +    ++P+ +P+G  +I+S   +    + L
Sbjct: 355 KFLVMVNRSDSGFNLAKLDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYN--KANVL 412

Query: 419 YSIDLNGRNE-TLINTPAYASDPQWVGFM 446
             + ++GR +  L  T      P W  F+
Sbjct: 413 SMVSIDGRFKARLPATNGRVRAPAWSPFL 441


>gi|311280380|ref|YP_003942611.1| Tol-Pal system beta propeller repeat protein TolB [Enterobacter
           cloacae SCF1]
 gi|308749575|gb|ADO49327.1| Tol-Pal system beta propeller repeat protein TolB [Enterobacter
           cloacae SCF1]
          Length = 430

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 96/428 (22%), Positives = 187/428 (43%), Gaps = 13/428 (3%)

Query: 24  IGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNL 81
               +   +HA V++       +  P+ +   ++         +  +V+ DL+ S  FN 
Sbjct: 11  FLMLWAAVLHAEVRIEITQGVDSARPIGVVPFQWAGPGAAPEDIGGIVAADLRNSGKFNP 70

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQI 139
           + +    Q+      + +   W++LG   +V G+V         V ++L D        +
Sbjct: 71  LDRSRLPQQPGTAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYTVAYQLVDTGGAPGTVL 129

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
               +  +    R   HT SD++++ +TG KG F +RI +V ++   G     L V D D
Sbjct: 130 AQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYD 188

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N +++     Q L  P +SP+  K+AY T++        ++ T  + A +++ +F   
Sbjct: 189 GYN-QFVVHRSSQPLMSPAWSPDGAKLAYVTFESGR--SALVIQTLANGAVRQVASFPQH 245

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP FS +G +   ++ K  ++++Y ++L S    ++TN    N   ++ PDS  + F 
Sbjct: 246 NGAPAFSPDGSKLAFALSKTGSLNLYVMNLASGQITQVTNGRSNNTEPNWFPDSQNLAFT 305

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +  +  I      
Sbjct: 306 SDQAGRPQVYKVNVNGGAPQRITWEGSQNQ-DADVSADGKFLVMVSSANGQQHIAKQDLA 364

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYAS 438
               ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +  L  T     
Sbjct: 365 AGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVK 422

Query: 439 DPQWVGFM 446
            P W  ++
Sbjct: 423 FPAWSPYL 430


>gi|290474099|ref|YP_003466975.1| outer membrane integrity protein [Xenorhabdus bovienii SS-2004]
 gi|289173408|emb|CBJ80185.1| required for outer membrane integrity, uptake of group A colicins,
           and translocation of phage DNA [Xenorhabdus bovienii
           SS-2004]
          Length = 419

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 93/426 (21%), Positives = 183/426 (42%), Gaps = 12/426 (2%)

Query: 26  GFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLIS 83
             +    HA V++       +  P+ +   K+        ++  +++ DL+ S  FN I 
Sbjct: 1   MMWAALAHAEVRIEITQGVDSARPIGVVPFKWTGAGNAPEEIGSIIAADLRNSGKFNPID 60

Query: 84  QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIG 141
            +   Q+ +    +     W++LG   ++ G++         V ++L D        +  
Sbjct: 61  PNRMPQQPSTASEV-TPAAWSALGIDSVIVGQIQPAADGNYLVSYQLVDTAGAPGTVMAQ 119

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
            +F       R  AHT SD +++ +TG KG F +R+ +V +    G     L V D DG 
Sbjct: 120 DQFKIEKKWLRHAAHTASDQVFEKLTGIKGAFRTRLAYVVKKSSVGKYPYELRVSDYDGY 179

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N ++      + L  P + P+  ++AY T++        ++ T    A +++ +F     
Sbjct: 180 N-QFTVHRSPEPLMSPAWLPDGSQLAYVTFESGR--SALVIQTLATTAVRQVASFPRHNG 236

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +G +    + K  ++++Y +DL S    ++T+    N   S+ PD+  +V+ SD
Sbjct: 237 APAFSPDGTKLAFVLSKTGSLNLYMMDLASGQIRQVTDGRSNNTEPSWMPDNQTLVYTSD 296

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           + G+ QLY +  NG   +R++ +   +  D   S  G  I     +     I        
Sbjct: 297 QGGRPQLYKIDINGGAPQRLTWEGSQNQ-DADVSSDGSFIVMVSSASGSQHIAKQDLGTG 355

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDP 440
             ++L +    + P+ +P+G  +I+S  +    G+ L  +  +GR +  L  T      P
Sbjct: 356 SVQMLTDTFLDETPSIAPNGTMVIYSSTQG--LGTVLQLVSTDGRFKARLPATDGQVKFP 413

Query: 441 QWVGFM 446
            W  ++
Sbjct: 414 AWSPYL 419


>gi|261341330|ref|ZP_05969188.1| Tol-Pal system beta propeller repeat protein TolB [Enterobacter
           cancerogenus ATCC 35316]
 gi|288316635|gb|EFC55573.1| Tol-Pal system beta propeller repeat protein TolB [Enterobacter
           cancerogenus ATCC 35316]
          Length = 431

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 96/439 (21%), Positives = 189/439 (43%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M      +       +   +HA V++       +  P+ +   ++         +  +V+
Sbjct: 1   MMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFQWAGPGAAPEDIGGIVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+      + +   W++LG   +V G+V         V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPGTAQEV-QPAAWSALGIDAVVVGQVTPAPDGGYNVAYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 120 VDTGGAPGTVLAQNTYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N ++      Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 179 FPYELRVSDYDGYN-QFTVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLSNG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+    N   +
Sbjct: 236 AVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDIGSGQIRQITDGRSNNTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 296 WFPDSQNLAFTSDQAGRPQVYKVNINGGAAQRITWEGSQNQ-DADISADGKTMVMVSTAG 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             +  T      P W  ++
Sbjct: 413 ARIPATDGQVKSPAWSPYL 431


>gi|148546494|ref|YP_001266596.1| translocation protein TolB [Pseudomonas putida F1]
 gi|148510552|gb|ABQ77412.1| Tol-Pal system beta propeller repeat, TolB [Pseudomonas putida F1]
 gi|313497574|gb|ADR58940.1| TolB [Pseudomonas putida BIRD-1]
          Length = 423

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 105/432 (24%), Positives = 206/432 (47%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF 79
           +L  + G         + V + S   +P+++          L   +++++  DL+ S  +
Sbjct: 1   MLCCVAGMAVAEEK-NILVTSGSDRATPIAVVPFGLQGGSVLPEDIADIIGNDLRNSGYY 59

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
           + I + +   + +    +  F+DW +LGAQ ++ G ++  G  RL+V++ L++V   +Q+
Sbjct: 60  SPIPRQNMISQPSQASEVI-FRDWKALGAQYVMVGSIVPSG-GRLQVQYALFNVATEQQV 117

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDR 198
           +      S    R +AH I+D  ++ +TG KG F++R+L+V+     +   + +L   D 
Sbjct: 118 LTGSVAGSTDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSTNNTRYTLQRSDY 177

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++ +    R  +++ NF  
Sbjct: 178 DGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQNIDTGR-REQVTNFEG 234

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +  AP +S +G R    + KD   DIY +++ S    R+T    IN    +  D + + F
Sbjct: 235 LNGAPAWSPDGSRLAFVLSKDGNPDIYVMNVASRQISRVTAGPGINTEPFWGKDGNTLYF 294

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVM 376
            SDR GK Q+Y    +G   +R++     +  +P  S     +           F +   
Sbjct: 295 TSDRGGKPQIYKQSVSGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQQGFTNFKVAAQ 353

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-A 435
                  ++L E S  ++PT +P+G  LI++ ++ G     L  + LNGR    + T   
Sbjct: 354 DLQRGSVKILSETSLDESPTVAPNGTMLIYATRQQGRG--VLMLVSLNGRVRLPLPTAQG 411

Query: 436 YASDPQWVGFMD 447
              +P W  +++
Sbjct: 412 EVREPSWSPYLN 423


>gi|167035189|ref|YP_001670420.1| translocation protein TolB [Pseudomonas putida GB-1]
 gi|166861677|gb|ABZ00085.1| Tol-Pal system beta propeller repeat protein TolB [Pseudomonas
           putida GB-1]
          Length = 423

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 105/432 (24%), Positives = 206/432 (47%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF 79
           +L  + G         + V + S   +P+++          L   +++++  DL+ S  +
Sbjct: 1   MLCCVAGMAVAEEK-NILVTSGSDRATPIAVVPFGLQGGSVLPEDIADIIGNDLRNSGYY 59

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
           + I + +   + +    +  F+DW +LGAQ ++ G ++  G  RL+V++ L++V   +Q+
Sbjct: 60  SPIPRQNMISQPSQASEVI-FRDWKALGAQYVMVGSIVPSG-GRLQVQYALFNVATEQQV 117

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDR 198
           +      S    R +AH I+D  ++ +TG KG F++R+L+V+     +   + +L   D 
Sbjct: 118 LTGSVAGSTDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSTNNTRYTLQRSDY 177

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++ +    R  +++ NF  
Sbjct: 178 DGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFIQNIDTGR-REQVTNFEG 234

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +  AP +S +G R    + KD   DIY +++ S    R+T    IN    +  D + + F
Sbjct: 235 LNGAPAWSPDGSRLAFVLSKDGNPDIYVMNVASRQISRVTAGPGINTEPFWGKDGNTLYF 294

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVM 376
            SDR GK Q+Y    +G   +R++     +  +P  S     +           F +   
Sbjct: 295 TSDRGGKPQIYKQSVSGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQQGFTNFKVAAQ 353

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-A 435
                  ++L E S  ++PT +P+G  LI++ ++ G     L  + LNGR    + T   
Sbjct: 354 DLQRGSVKILSETSLDESPTVAPNGTMLIYATRQQGRG--VLMLVSLNGRVRLPLPTAQG 411

Query: 436 YASDPQWVGFMD 447
              +P W  +++
Sbjct: 412 EVREPSWSPYLN 423


>gi|120599219|ref|YP_963793.1| translocation protein TolB [Shewanella sp. W3-18-1]
 gi|146292707|ref|YP_001183131.1| translocation protein TolB [Shewanella putrefaciens CN-32]
 gi|166988084|sp|A4Y5U9|TOLB_SHEPC RecName: Full=Protein tolB; Flags: Precursor
 gi|166988086|sp|A1RKP4|TOLB_SHESW RecName: Full=Protein tolB; Flags: Precursor
 gi|120559312|gb|ABM25239.1| TolB, N-terminal domain protein [Shewanella sp. W3-18-1]
 gi|145564397|gb|ABP75332.1| TolB, N-terminal domain protein [Shewanella putrefaciens CN-32]
          Length = 442

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 112/450 (24%), Positives = 199/450 (44%), Gaps = 24/450 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVS 70
           MKI L   L L      T   A + +       +   IA   F           +++VV 
Sbjct: 1   MKI-LAKWLALAVLLCTTPTKAALDIVITEGIDAARPIAVMPFVWQGTGAPPQAIADVVM 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F  + +    Q+     +  +   W S+GA+ LV G V   G D+  V F L
Sbjct: 60  SDLVRSGTFKPLDELGLPQRNIGAVAQFQASAWGSVGAEALVLGSVKPYGTDQYLVSFDL 119

Query: 131 WDVKDRK-------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            D+   +              +  ++   S A +R+  H ISD +Y+ +TG +G F +RI
Sbjct: 120 IDLVKAQNQSLKGAVSPTEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGIRGAFLTRI 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V  +  +      L + D DG N + L  S +  L  P +SP+ +++AY +++++   
Sbjct: 180 SYVVVN-HTQKAPYQLMIADYDGFNEQMLLRSPEP-LMSPTWSPDGRRLAYVSFENKKA- 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ D    +   ++ +F  +  AP FS +GK   +++ KD   +IY +D+ + A +R+
Sbjct: 237 EIFVQDLYT-QVRTKVSSFPGINGAPAFSPDGKSLAVTLSKDGQPEIYVIDIATKAIKRI 295

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN   I+   S+ PD   ++F S+R GK QLY +        R + + E +      +P 
Sbjct: 296 TNHYAIDTEPSWYPDGKSLLFTSERGGKPQLYRVDLASGKVTRETFEGEWNLGG-SITPD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  + F   +  KF I  M  +    ++L      ++P+ +P+G  +I+     G     
Sbjct: 355 GRSMIFVNRTNGKFNIARMDLNTRFMQVLTSTRLDESPSVAPNGTMVIYGTTHQGKQ--V 412

Query: 418 LYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           L ++  +GR +  L         P W  F+
Sbjct: 413 LAAVSTDGRFKARLPVGQGEVKSPSWSPFL 442


>gi|307545156|ref|YP_003897635.1| translocation protein TolB [Halomonas elongata DSM 2581]
 gi|307217180|emb|CBV42450.1| translocation protein TolB [Halomonas elongata DSM 2581]
          Length = 429

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 109/437 (24%), Positives = 214/437 (48%), Gaps = 10/437 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID-ELGGKVSEVVSK 71
           M+  +   L  +  F      A + +     N     IA   F      L   ++++V+ 
Sbjct: 1   MRALMTTWLAALLLFCTPLAQAELTIDITRGNEQATPIAVVPFADEGASLPVDLAQIVAD 60

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+RS  F  + + +  +K ++ D + RF DW +L  + +V GRV +EG+  +RV + L 
Sbjct: 61  DLERSGYFAPLERGAMFEKPSSSDEV-RFGDWKALDTRYMVVGRVSREGEG-VRVRYELM 118

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           DV    +++G+   +S    R  AH ISD ++++ITG +G F++RI +V+   V   +  
Sbjct: 119 DVSGESRMLGETVTASSGQLRAAAHRISDQVFEAITGIRGAFSTRIAYVTSEGVGDNMSF 178

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V D DG N +    S D+ +  P +SP+ +K+AY +++ E    +Y+ +    R  K
Sbjct: 179 RLFVADADGHNSQQAL-SSDEPIMSPSWSPDGRKLAYVSFEGERPA-IYVQEVSSGRRVK 236

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            + +F  +  AP +S +G++  +++ +D   +IY++D+ S   +R+TN+  I    ++SP
Sbjct: 237 -LTSFEGLNSAPSWSPDGRKLAVALSRDGQPEIYTIDIGSRDLQRITNSPSIETEPAWSP 295

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   +++ SDR G  Q+Y     G + +R++     +     ++P G+ I         +
Sbjct: 296 DGRSLIYTSDRSGGPQIYRQALGGGEPERLTYTGNYNARA-RFAPDGEAIFLIHKGNNGY 354

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TL 430
            +     D  +   + +    ++P+ +P+G  +IF+ ++       L ++  +GR    L
Sbjct: 355 QVARQDLDNGRLVEISDAQQAESPSVAPNGTMVIFATQQGSRG--VLGAVSADGRASFRL 412

Query: 431 INTPAYASDPQWVGFMD 447
                   +P W  F++
Sbjct: 413 PAAQGDVREPAWSPFLN 429


>gi|194366891|ref|YP_002029501.1| translocation protein TolB [Stenotrophomonas maltophilia R551-3]
 gi|194349695|gb|ACF52818.1| Tol-Pal system beta propeller repeat protein TolB [Stenotrophomonas
           maltophilia R551-3]
          Length = 439

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 112/440 (25%), Positives = 211/440 (47%), Gaps = 13/440 (2%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYS--PVSIAFTKFVSIDELGG-KVSEV 68
            M   L +   L+  F   +    + +     N S  P+++    +          V+ V
Sbjct: 3   KMPRWLAVFAALLLPFAAVAQQKGLDIDIIGGNASALPITVVPMPYQGSSAAPQTDVAGV 62

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V  DL+RS  F  + +    +K      I +F  W +L    +V GRV+  G    RVE+
Sbjct: 63  VRADLERSGQFRTLPEAQIVEKPVRGGDI-QFATWRALKQNYIVVGRVLDAGAGAYRVEY 121

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            L+DV   ++++G    +   + R +AH ++D IY+ ITG +G F +RI +V+ S     
Sbjct: 122 ELFDVPKGERLLGLAMTARGNAMRDVAHQMADAIYEKITGVRGAFWTRIAYVTASGKGDA 181

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           ++ +L V D DG N + +  S +  L  P +SP+  K+AY +++  +   +Y+ +     
Sbjct: 182 MRYALMVADSDGFNPQTIVRSAEP-LLSPSWSPDGSKLAYVSFERGNSA-IYIQNIGTG- 238

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A + + +FR +  AP FS +G++  +++ +    +IY +DL S    +LTN   I+   +
Sbjct: 239 ARELVTSFRGINSAPAFSPDGRKLALTLSRSGNPEIYVMDLGSKQLAQLTNHFAIDTEPT 298

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++PD S + F SDR G+ Q+Y + + G   +R++     +   P  S  G  IA  + SG
Sbjct: 299 WAPDGSAVYFTSDRGGRPQVYKVGAGGGSAERVTFQGNYNA-KPSVSYDGKKIAVAQGSG 357

Query: 369 EKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             + I +M       R   L   S  ++P+++P+   ++++ ++ G     LY++  + R
Sbjct: 358 NSYKIAMMDSSLGSPRWSTLSPGSLDESPSFAPNASMVLYAAREGGRG--VLYAVSADAR 415

Query: 427 -NETLINTPAYASDPQWVGF 445
             + L+       +P W  +
Sbjct: 416 VRQRLVLADGDVREPAWSPY 435


>gi|317491197|ref|ZP_07949633.1| tol-Pal system beta propeller repeat protein TolB
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920744|gb|EFV42067.1| tol-Pal system beta propeller repeat protein TolB
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 430

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 104/445 (23%), Positives = 199/445 (44%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + + L +L       + + +HA V++          P+ +   K++        
Sbjct: 1   MKQAFRVAMGLLIL-------WASVLHAEVRIVITQGVDTARPIGVVPFKWMGPGSAPED 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V+ DL+ S  FN I  +   Q+ T    +     W +LG   +V G+V        
Sbjct: 54  IGGIVAADLRNSGKFNPIDTNRMPQQPTTVAEV-TPAAWTALGIDAVVVGQVQPSADGGY 112

Query: 125 RVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V +++ D        +   ++  +    R  AHT SD++++ +TG KG F +RI +V +
Sbjct: 113 VVSYQMVDTSGNPGSVLSQNQYKVTKQWLRYAAHTSSDEVFEKLTGIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G     L V D DG N +++     Q L  P +SP+  K+AY T++        ++
Sbjct: 173 TN-GGQFPYELRVADYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGK--SALVI 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S A  ++T+   
Sbjct: 229 QTLSNGAIRQVASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMDLGSGAIRQVTDGRS 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N   S+ PDS  + F SD+ G+ Q+Y +  NG   +R++ +   +  D   S  G  + 
Sbjct: 289 NNTEPSWFPDSQNLAFTSDQGGRPQIYKVNINGGAPERLTWEGSQNQ-DGDVSSDGKFLV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               SG    I  +    +  ++L      + P+ +P+G  +I+S  +    GS L  + 
Sbjct: 348 MVGTSGGSQHITKLDLGSNANQVLTSTFLDETPSIAPNGTMVIYSSTQG--LGSVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKFPAWSPYL 430


>gi|319426011|gb|ADV54085.1| TonB biopolymer transport system periplasmic component, TolB
           [Shewanella putrefaciens 200]
          Length = 442

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 112/450 (24%), Positives = 199/450 (44%), Gaps = 24/450 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVS 70
           MKI L   L L      T   A + +       +   IA   F           +++VV 
Sbjct: 1   MKI-LAKWLALAVLLCTTPTKAALDIVITEGIDAARPIAVMPFVWQGTGAPPQAIADVVM 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F  + +    Q+     +  +   W S+GA+ LV G V   G D+  V F L
Sbjct: 60  SDLVRSGTFKPLDELGLPQRNIGAVAQFQASAWGSVGAEALVLGSVKPYGTDQYLVSFDL 119

Query: 131 WDVKDRK-------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            D+   +              +  ++   S A +R+  H ISD +Y+ +TG +G F +RI
Sbjct: 120 IDLVKAQNQSLKGPVSPTEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGIRGAFLTRI 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V  +  +      L + D DG N + L  S +  L  P +SP+ +++AY +++++   
Sbjct: 180 SYVVVN-HTQKAPYQLMIADYDGFNEQMLLRSPEP-LMSPTWSPDGRRLAYVSFENKKA- 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ D    +   ++ +F  +  AP FS +GK   +++ KD   +IY +D+ + A +R+
Sbjct: 237 EIFVQDLYT-QVRTKVSSFPGINGAPAFSPDGKSLAVTLSKDGQPEIYVIDIATKAIKRI 295

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN   I+   S+ PD   ++F S+R GK QLY +        R + + E +      +P 
Sbjct: 296 TNHYAIDTEPSWYPDGKSLLFTSERGGKPQLYRVDLASGKVTRETFEGEWNLGG-SITPD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  + F   +  KF I  M  +    ++L      ++P+ +P+G  +I+     G     
Sbjct: 355 GRSMIFVNRTNGKFNIARMDLNTRFMQVLTSTRLDESPSVAPNGTMVIYGTTHQGKQ--V 412

Query: 418 LYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           L ++  +GR +  L         P W  F+
Sbjct: 413 LAAVSTDGRFKARLPVGQGEVKSPSWSPFL 442


>gi|326316638|ref|YP_004234310.1| Tol-Pal system beta propeller repeat protein TolB [Acidovorax
           avenae subsp. avenae ATCC 19860]
 gi|323373474|gb|ADX45743.1| Tol-Pal system beta propeller repeat protein TolB [Acidovorax
           avenae subsp. avenae ATCC 19860]
          Length = 439

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 106/427 (24%), Positives = 196/427 (45%), Gaps = 14/427 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF 79
           ++ L          A  ++       +    A   F        K+S ++  DL+RS  F
Sbjct: 23  IVALASAATALPALAQFRLDIVGVGTTQYPTAIAPFRGEAGSPQKISAIIQADLERSGQF 82

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
            ++          + +S P    W   GA  L TG V +    R  V FRLW+    + +
Sbjct: 83  RVVDGSG---PQLDENSRPDAALWKEKGADSLTTGSVTRLPDGRYDVRFRLWNTVRGEDL 139

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            G+ F  +    R +AH I+D +Y+ +TG++G F++RI +V+++      + SL V D D
Sbjct: 140 GGQSFVVTQGDLRLVAHRIADYVYEKLTGQRGIFSTRIAYVTKAGS----RYSLWVADSD 195

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N +    S + I+  P +SP+  ++AY +++    + VY+ D    R  + I NFR  
Sbjct: 196 GENAQSALSSPEPII-SPAWSPSGTQLAYVSFESRKPV-VYVHDVSTGR-RRLIANFRGS 252

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP +S +G+   +++ +D +  +Y++D       RL  +  I+   +YS D   I F 
Sbjct: 253 NSAPAWSPDGRTLAVTLSRDGSSQLYTIDANGGEPRRLMQSSGIDTEPTYSSDGRSIYFV 312

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SDR G  Q+Y + + G   +R++     +   P  SP G  +A+    G  F + VM   
Sbjct: 313 SDRGGAPQIYRVPATGGSAERVTFTGAYN-ISPSISPDGKWLAYISRVGGAFKLHVMDLT 371

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYAS 438
                 + + +  ++P+++P+G+ ++++ ++ G     L +  L+G+    L        
Sbjct: 372 SGSVTAITDTTADESPSFAPNGKLIVYATQQQGR--EALMTTTLDGKIKARLAGQSGDIR 429

Query: 439 DPQWVGF 445
           +P W  F
Sbjct: 430 EPDWGPF 436



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 8/140 (5%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I FVS+   +      +  +   G +   +T +       P  SP+ + +AY +     
Sbjct: 308 SIYFVSDRGGAP----QIYRVPATGGSAERVTFTG-AYNISPSISPDGKWLAYIS-RVGG 361

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             ++++MD              +   +P F+ NGK  + + Q+     + +  L      
Sbjct: 362 AFKLHVMDLTSGSVTAI--TDTTADESPSFAPNGKLIVYATQQQGREALMTTTLDGKIKA 419

Query: 296 RLTNTLFINISASYSPDSSQ 315
           RL           + P   Q
Sbjct: 420 RLAGQSGDIREPDWGPFQKQ 439


>gi|330445541|ref|ZP_08309193.1| tol-Pal system beta propeller repeat protein TolB [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489732|dbj|GAA03690.1| tol-Pal system beta propeller repeat protein TolB [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 442

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 108/449 (24%), Positives = 207/449 (46%), Gaps = 23/449 (5%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
              + LCL L+ +  F   ++   +    +SA   P+ +   ++    +L   +S V++ 
Sbjct: 3   RWIMGLCLALLSVSQFANAALELVITDGVDSAR--PIGVVPFQWEGEGKLPTDISAVIAS 60

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DLQRS  F+ +  +   Q   N   I  +  W+ +G   +VTG + K       V ++L 
Sbjct: 61  DLQRSGKFSPVPTNKLPQLPHNESQI-DYSAWSKMGVDAVVTGTIAKNPDGTYTVNYQLV 119

Query: 132 DVKDRKQ-------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
           D+   K              ++  +    P   R+ AH ISD IYQ +TGE+G F +RI 
Sbjct: 120 DIVKGKLAAGTEGAAKGDYLLLNNQASVKPNRMRQYAHRISDLIYQKLTGERGAFLTRIA 179

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +V ++         L V D DG N R +  S+ Q L  P +SP+  K+AY +++     +
Sbjct: 180 YV-DNNQGAKFPYQLLVADYDGYNERVVLKSK-QPLMSPAWSPDGSKLAYVSFESGKA-Q 236

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++++D    +  + + ++     +P+FS +G +  + + K  ++ +Y  DL++    ++T
Sbjct: 237 IFVLDIYTGK-REVVADYPRHNGSPQFSPDGSKLAMVLSKTGSLQVYIKDLRTKQLRQIT 295

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +    N  A ++PD   I F SDR G+ Q+Y M     D +R++     +   P  +P G
Sbjct: 296 HGRANNTEAVWAPDGQSIYFTSDRGGRPQVYHMDLATGDTQRVTWQGSQN-MGPQVTPDG 354

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +     S   + I          ++L +    ++P+ +P+G  +I+S  ++  T  +L
Sbjct: 355 RYLVVVNRSDSGYNIAKQDLKTGAMQILTKARLAESPSIAPNGSMIIYSSAQNNGT-YEL 413

Query: 419 YSIDLNGRNE-TLINTPAYASDPQWVGFM 446
             + ++GR +  L ++      P W  F+
Sbjct: 414 SLVSIDGRFQARLPSSSKRVRAPSWGPFL 442


>gi|113970703|ref|YP_734496.1| translocation protein TolB [Shewanella sp. MR-4]
 gi|114047932|ref|YP_738482.1| translocation protein TolB [Shewanella sp. MR-7]
 gi|122944592|sp|Q0HTY0|TOLB_SHESR RecName: Full=Protein tolB; Flags: Precursor
 gi|123029559|sp|Q0HHM8|TOLB_SHESM RecName: Full=Protein tolB; Flags: Precursor
 gi|113885387|gb|ABI39439.1| TolB, N-terminal domain protein [Shewanella sp. MR-4]
 gi|113889374|gb|ABI43425.1| TolB, N-terminal domain protein [Shewanella sp. MR-7]
          Length = 442

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 109/450 (24%), Positives = 200/450 (44%), Gaps = 24/450 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSAN--YSPVSIAFTKFVSIDELGGKVSEVVS 70
           MKI L   L L          A + +          P+++   ++         +++VV 
Sbjct: 1   MKI-LAKWLALAVLLCTMPAKAALDIVITEGVDAARPIAVMPFQWQGAGAPPQAIADVVM 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F  + +    Q+     +      W ++GA+ +V G V   G D+  V F L
Sbjct: 60  SDLIRSGTFKPLDELGLPQRGIGALAQFDASAWANVGAEAVVVGSVKPYGTDQFLVSFDL 119

Query: 131 WDVKDRK-------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            D+   +              +  ++   S A +R+  H ISD +Y+ +TG +G F +RI
Sbjct: 120 IDLVKAQNQALKGPTSATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGIRGAFLTRI 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V  +  S     SL + D DG N + L  S +  L  P +SP+ +++AY +++++   
Sbjct: 180 SYVVVN-HSQKAAYSLMIADYDGYNEQMLLRSPEP-LMSPSWSPDGRRLAYVSFENKKA- 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ D    +   ++ +F  +  AP FS +GK   +++ KD   +IY +D+ + A +R+
Sbjct: 237 EIFVQDLYT-QVRTKVSSFPGINGAPTFSPDGKSLAVTLSKDGQPEIYVIDIATKAAKRI 295

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN   I+   S+ PD   ++F S+R G+ QLY +  N     R + + E +      +P 
Sbjct: 296 TNHYSIDTEPSWYPDGKSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNLGG-SITPD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+     G     
Sbjct: 355 GRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTYQGKQ--V 412

Query: 418 LYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           L ++  +GR +  L         P W  F+
Sbjct: 413 LAAVSTDGRFKARLPVGQGEVKSPSWSPFL 442


>gi|103485823|ref|YP_615384.1| translocation protein TolB [Sphingopyxis alaskensis RB2256]
 gi|118574599|sp|Q1GWC1|TOLB_SPHAL RecName: Full=Protein tolB; Flags: Precursor
 gi|98975900|gb|ABF52051.1| TolB-like protein [Sphingopyxis alaskensis RB2256]
          Length = 454

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 155/458 (33%), Positives = 229/458 (50%), Gaps = 17/458 (3%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA-NYSPVSIAFTKFVSI- 58
           MSLR  I+  L + +     L       P ++    +       +     I    F +  
Sbjct: 1   MSLRP-ISLMLALLLTSAPALAQSAPTPPATVQTEPRETIEGTLSQERTVIGIPSFATAS 59

Query: 59  ---------DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
                    D LG ++++V++ DL+RS +F  I  +  +         PRF +W + GA+
Sbjct: 60  VQTVAGLRTDALGRQLADVIAADLERSGLFEPIGPNGVRAIGRAEVQAPRFGEWQARGAE 119

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            +V G V       L V   L+D     +++ K F   PA WR+ AH  +D IY  ++GE
Sbjct: 120 NVVHGFVDAGSNGSLIVGCYLYDTALGSELVRKGFEIQPADWRRAAHKCADAIYSRLSGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
              F+SR+ +++ES   G     L +MD DG N R++T  +  +   PRFSP+ +K+ Y 
Sbjct: 180 APFFDSRVAYIAESGPKGNRIKRLAIMDSDGGNHRFITNGQ-ALALSPRFSPDYKKIVYV 238

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +Y   D +RV++ D       + +   R+   APR+S +G + L S+      DIY +  
Sbjct: 239 SY-LNDRVRVFIYDVASGTQ-RLVTESRNPTFAPRWSPDGTQILYSMAVGGNTDIYRISA 296

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                 RLT    I++  S+SPD  +IVFESDR G +QLYVM  +GS+Q+RIS      Y
Sbjct: 297 NGGTPVRLTTAPGIDVGGSFSPDGRKIVFESDRSGSQQLYVMNIDGSNQQRISFGG-GRY 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             P WSP+GDLIAFT+  G +F IGVM   G   R+L      +APTWSP+GR + F R 
Sbjct: 356 ATPEWSPRGDLIAFTRMGGGEFRIGVMTPSGGGVRMLTNGWQDEAPTWSPNGRVIQFFRT 415

Query: 410 KDGDTG-SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
             G  G S L+ +DL G N   + TP   SDP W   +
Sbjct: 416 TPGREGRSSLWQVDLTGVNLRRLPTPQDGSDPSWGPVL 453


>gi|121604951|ref|YP_982280.1| translocation protein TolB [Polaromonas naphthalenivorans CJ2]
 gi|166229983|sp|A1VNY1|TOLB_POLNA RecName: Full=Protein tolB; Flags: Precursor
 gi|120593920|gb|ABM37359.1| TolB, N-terminal domain protein [Polaromonas naphthalenivorans CJ2]
          Length = 429

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 112/428 (26%), Positives = 204/428 (47%), Gaps = 14/428 (3%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDV 78
           + L+  G F   S  A  +V  +    + + IA   F    +   K+  +V  DL+RS +
Sbjct: 13  VSLLAAGAFSSMSAFAQFRVEVSGVGMTQLPIAIAPFRGEAQSPQKIGSIVKADLERSGM 72

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F  +        + + ++ P    W   GA  +VTG V      R  V  RLWDV   + 
Sbjct: 73  FRGVDAGGV---VADENTRPDLASWRQKGADAMVTGSVSPLADGRFDVRLRLWDVVREQD 129

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           + G+ +  + +  R  AH +SD +Y+ +TGEKG F++RI +V+++      + +L V D 
Sbjct: 130 LGGQSYTVTKSDLRLSAHRVSDFVYEKLTGEKGIFSTRIAYVTKAG----QRYTLWVADS 185

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG + +    S + I+  P +SP+  ++AY +++    + +Y  D    +  + + NFR 
Sbjct: 186 DGESAQSALASPEPII-SPAWSPSGAQLAYVSFESRKPV-IYSHDVATGK-RRLLANFRG 242

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
              AP +S +G + + ++ +     IYS+ L     +RLT +  I+   ++SPD   I F
Sbjct: 243 SNSAPAWSPDGSQLVATLSQAGGSQIYSIGLNGGDPKRLTQSSSIDTEPAFSPDGRLIYF 302

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SDR G  Q+Y M   G + +R++     +   PV SP G  +A+    G  F + VM+ 
Sbjct: 303 VSDRGGSPQIYRMSPAGGNAERVTFTGSYN-ISPVVSPDGRWLAYVSRVGGGFKLHVMEL 361

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYA 437
                  + + S  ++P+++P+ R ++++ ++ G     L +  L+G+    L       
Sbjct: 362 STGTVTSITDTSADESPSFAPNSRLIVYATQQQGK--EALMTTTLDGKIKARLSGAGGDI 419

Query: 438 SDPQWVGF 445
            +P W  F
Sbjct: 420 REPDWGPF 427


>gi|118574593|sp|Q3K7W5|TOLB_PSEPF RecName: Full=Protein tolB; Flags: Precursor
          Length = 433

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 110/441 (24%), Positives = 210/441 (47%), Gaps = 14/441 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M+  L  +LV+I       +     +   S     +P+++    F     L   ++E++ 
Sbjct: 1   MRNLLRGMLVVICCMAGIVMADEKNILVTSGSDRATPIAVVPFGFQGGAVLPDDMAEIIG 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  ++ I + +   + + P  I  F+DW ++GAQ ++ G ++  G  RL+V++ L
Sbjct: 61  NDLRNSGYYSPIPKQNMISQPSQPSEII-FRDWKAVGAQYMMVGSIVPAG-GRLQVQWAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +++       +    R +AH ISD  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQKVADGSVSGTTEQLRDMAHYISDQSFEKLTGIKGAFSTRLLYVTAERFSEKNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++ +    R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFMQNIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G R    + KD   DIY ++L S    R+T    IN    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGNRLAFVLSKDGNPDIYVMNLGSRQITRVTAGPGINTEPYW 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D S I F SDR GK Q+Y   + G   +R++     +  +P  S     +        
Sbjct: 296 GKDGSTIYFTSDRGGKPQIYKTSAGGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F +          ++L + +  ++PT +P+G  +I++ ++ G     L  + +NGR 
Sbjct: 355 FTNFKVAAQDLQRGSVKILTDSTLDESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|253997444|ref|YP_003049508.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Methylotenera mobilis JLW8]
 gi|253984123|gb|ACT48981.1| Tol-Pal system beta propeller repeat protein TolB [Methylotenera
           mobilis JLW8]
          Length = 433

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 104/433 (24%), Positives = 213/433 (49%), Gaps = 13/433 (3%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK-VSEVVSKDLQR 75
           L    + +     +  HA +++  +  N   + IA   F        + ++ ++S DL+R
Sbjct: 12  LLACTLTVSAMMTSVSHAALEIEISGGNAQQLPIAIVPFNQDAVKNQENIANIISADLRR 71

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F ++       K +    + ++ DW SL AQ +  G+V     +RL+V F+L DV  
Sbjct: 72  SGMFRVLETAGVASKPSTIAQV-KYSDWASLQAQAIAVGKVEALPGNRLKVSFQLGDVLK 130

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           + Q+    +  +P+  R  AH I+D IYQ +TGE   F SRI ++++S      + +L V
Sbjct: 131 QTQLADMDYNITPSQLRMTAHKIADVIYQKLTGESAIFASRIAYINKS----KGRYALQV 186

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N + +  S + I+  P +SP+  K+AY +++ +    +  + + +      + +
Sbjct: 187 ADADGVNPQTVVSSNEPII-SPAWSPDGTKIAYVSFEKKKP--IIFVQSLMTGQRITLAS 243

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F+    AP ++ +G +  I +       +Y ++   +  ++L+ +  I+    +SPD+  
Sbjct: 244 FKGNNSAPAWAPDGSKLAIVLTHAANSQLYLINADGSGLKQLSKSSAIDTEPVWSPDAKW 303

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + F SDR G  Q+Y + S G D +R++ D   +   P +SP G  +A  +  G ++ + +
Sbjct: 304 VYFSSDRGGSPQIYKVSSLGGDAQRVTFDGTYNL-SPRFSPDGKSLAMIRNDGGRYRVAL 362

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTP 434
                 Q ++L E +  ++P+++P+GR ++++ +  G     L ++  +GR  + L  + 
Sbjct: 363 QNLATGQVQILSEGNQDESPSFAPNGRVVLYATRSAGRGA--LAAVSADGRVKQRLSESG 420

Query: 435 AYASDPQWVGFMD 447
               +P W   ++
Sbjct: 421 GDIREPAWGPLLN 433


>gi|221068062|ref|ZP_03544167.1| Tol-Pal system beta propeller repeat protein TolB [Comamonas
           testosteroni KF-1]
 gi|220713085|gb|EED68453.1| Tol-Pal system beta propeller repeat protein TolB [Comamonas
           testosteroni KF-1]
          Length = 417

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 107/412 (25%), Positives = 189/412 (45%), Gaps = 14/412 (3%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
             +V       + + IA   F        K+S ++  DL+RS  F  +          + 
Sbjct: 16  QFRVEVTGVGLTQLPIAIAPFKGEGSAPQKISAIIQADLERSGQFRGVDASGV---ALDE 72

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
            S P    W   GA  L TG + +    R  V FRLWDV   + + G+ F  +    R +
Sbjct: 73  TSRPDVAQWRQKGADSLATGSITRLADGRWDVRFRLWDVVKGQDLGGQGFAVTTGDLRLV 132

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH I+D IY+ +TGEKG F++RI +V+++      +  L + D DG N +    S + I+
Sbjct: 133 AHRIADYIYEKLTGEKGIFSTRIAYVTKAGA----QYRLWIADADGENAQSALSSPEPII 188

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P ++PN  ++AY +++    + VY+ D       + + NFR    AP +S +G R  +
Sbjct: 189 -SPAWAPNGTQLAYVSFESRKPV-VYVHDVASG-HRRLLANFRGSNSAPAWSPDGSRLAV 245

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ +D    +Y +  Q     RL  +  I+    +S D   I F SDR G  Q+Y + S+
Sbjct: 246 TLSRDGGSQLYLLSAQGGEPRRLMQSSGIDTEPCFSSDGRTIYFVSDRGGAPQVYKVSSS 305

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G   +R++     +   P  SP G  +A+    G  F + VM         + + +  ++
Sbjct: 306 GGSAERVTFSGTYN-ISPAISPDGKWLAYVSRVGGGFKLQVMDLATGTVNSVTDTTADES 364

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGF 445
           P+++P+ R ++++  + G     L +  L+G+ +  +  P     +P W  F
Sbjct: 365 PSFAPNSRLIVYATIQGGR--EALMTTTLDGKIKARLAGPSGDIREPDWGPF 414



 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 76/185 (41%), Gaps = 11/185 (5%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R     +      ++  D      +   ++    IS +++P+ +Q+ + S    K  +Y
Sbjct: 153 TRIAYVTKAGAQYRLWIADADGENAQSALSSPEPIISPAWAPNGTQLAYVSFESRKPVVY 212

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V        +R+  +   S   P WSP G  +A T        + ++   G + R L++ 
Sbjct: 213 VHDVASG-HRRLLANFRGSNSAPAWSPDGSRLAVTLSRDGGSQLYLLSAQGGEPRRLMQS 271

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQ 441
           S +   P +S  GR++ F   + G    ++Y +  +G +   +        +PA + D +
Sbjct: 272 SGIDTEPCFSSDGRTIYFVSDRGG--APQVYKVSSSGGSAERVTFSGTYNISPAISPDGK 329

Query: 442 WVGFM 446
           W+ ++
Sbjct: 330 WLAYV 334


>gi|117920972|ref|YP_870164.1| translocation protein TolB [Shewanella sp. ANA-3]
 gi|166988085|sp|A0KY89|TOLB_SHESA RecName: Full=Protein tolB; Flags: Precursor
 gi|117613304|gb|ABK48758.1| TolB, N-terminal domain protein [Shewanella sp. ANA-3]
          Length = 442

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 108/450 (24%), Positives = 200/450 (44%), Gaps = 24/450 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSAN--YSPVSIAFTKFVSIDELGGKVSEVVS 70
           MKI L   L L          A + +          P+++   ++         +++VV 
Sbjct: 1   MKI-LAKWLALAVLLCTMPAKAALDIVITEGVDAARPIAVMPFQWQGAGAPPQAIADVVM 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F  + +    Q+     +      W ++GA+ +V G V   G D+  V F L
Sbjct: 60  SDLIRSGTFKPLDELGLPQRGIGALAQFDASAWANVGAEAVVVGSVKPYGTDQFLVSFDL 119

Query: 131 WDVKDRK-------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            D+   +              +  ++   S A +R+  H ISD +Y+ +TG +G F +RI
Sbjct: 120 IDLVKAQNQALKGPTSATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGIRGAFLTRI 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V  +  +     SL + D DG N + L  S +  L  P +SP+ +++AY +++++   
Sbjct: 180 SYVVVN-HTQKAAYSLMIADYDGYNEQMLLRSPEP-LMSPSWSPDGRRLAYVSFENKKA- 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ D    +   ++ +F  +  AP FS +GK   +++ KD   +IY +D+ + A +R+
Sbjct: 237 EIFVQDLYT-QVRTKVSSFPGINGAPTFSPDGKSLAVTLSKDGQPEIYVIDIATKAAKRI 295

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN   I+   S+ PD   ++F S+R G+ QLY +  N     R + + E +      +P 
Sbjct: 296 TNHYSIDTEPSWYPDGKSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNLGG-SITPD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+     G     
Sbjct: 355 GRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTYQGKQ--V 412

Query: 418 LYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           L ++  +GR +  L         P W  F+
Sbjct: 413 LAAVSTDGRFKARLPVGQGEVKSPSWSPFL 442


>gi|229592295|ref|YP_002874414.1| translocation protein TolB [Pseudomonas fluorescens SBW25]
 gi|259533872|sp|C3JYS2|TOLB_PSEFS RecName: Full=Protein tolB; Flags: Precursor
 gi|229364161|emb|CAY51810.1| TolB colicin import protein [Pseudomonas fluorescens SBW25]
          Length = 433

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 108/441 (24%), Positives = 206/441 (46%), Gaps = 14/441 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M+  L  +LV+I      +      +   S     +P+++    +     L   ++++VS
Sbjct: 1   MRNLLRGMLVVICCMAGIAAADEKNILVTSGSDRATPIAVVPFGWQGGSVLPDDMAQIVS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +   +      +  F+DW ++GAQ L+ G +   G  RL++++ L
Sbjct: 61  DDLRNSGYYAPIPKGNMISQPNQASEVV-FRDWKAVGAQYLMVGNITPAG-GRLQIQYTL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +Q++      +    R +AH ISD  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQQVLTGSVSGTAEQLRDMAHYISDQSFEKLTGIKGAFSTRLLYVTAERFSVDNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++     R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQRRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G R    + KD   DIY +++ S    R+T+   IN    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGSRLAFVLSKDGNPDIYVMNMASRQISRVTSGPGINTEPFW 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D S I F SDR GK Q+Y    NG   +R++     +  +P  S     +        
Sbjct: 296 GKDGSTIYFTSDRGGKPQVYKANVNGGGAERVTFIGNYNA-NPKLSADEKTLVMIHRQDG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F +          ++L + +  ++ T +P+G  +I++ ++ G     L  + +NGR 
Sbjct: 355 FTNFRVAAQDLQRGTVKILTDTNLDESATVAPNGTMVIYATRQQGRG--VLMLVSINGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|260772527|ref|ZP_05881443.1| TolB protein precursor [Vibrio metschnikovii CIP 69.14]
 gi|260611666|gb|EEX36869.1| TolB protein precursor [Vibrio metschnikovii CIP 69.14]
          Length = 450

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 105/458 (22%), Positives = 195/458 (42%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L +  +L+        +  +++       +  P++I   K+     L   +S V++
Sbjct: 1   MLKRLIIGWLLVFTSSMQLAYGALELVITDGINSARPIAIVPFKWEGKTPLPEDISAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ I+ D   Q   +   +  F  W  +G   L+TG +    +    + ++L
Sbjct: 61  SDLQRSGKFSPIATDRMPQTPYSETEV-TFDAWTRIGVDALLTGSITLNQQGNYVINYQL 119

Query: 131 WDVKDRKQIIGKKFFSSPAS---------------------WRKIAHTISDDIYQSITGE 169
            DV   +   G+    S                         R+ AH ISD +Y+ +TGE
Sbjct: 120 VDVVRGQLTQGQSRALSADGQLVLSKDHVLFNKVATIPAPRMREYAHRISDLVYEELTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           KG F +RI +V  +         L V D DG N R +  S+ Q L  P +SP+ +++AY 
Sbjct: 180 KGAFLTRIAYVVVN-DKDSFPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGRQLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +++MD       +++ ++     APRFS +GK   + + K   + +Y++DL
Sbjct: 238 SFQNGQA-EIFIMDIYTGE-REKLTSYPRHNGAPRFSPDGKTLALVLSKTGTLQVYTLDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            S    ++T+    N    + PD   ++F SDR G  Q+Y +        R++     + 
Sbjct: 296 ASRKLTQITHGRSNNTEPFWHPDGKSLIFTSDRGGNPQIYRVNLANQAVDRLTWQGRQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   F I     +    ++L +    ++P+ +P+G  +I+S  
Sbjct: 356 GGQ-ITPDGRFMIMVNRSNSGFHIAKQDLETGALQVLTQTLLDESPSIAPNGGMVIYSSM 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +    + L  + ++GR +  L  T      P W  F+
Sbjct: 415 YN--QANVLSMVSIDGRFKARLPATNGRVRSPAWSPFL 450


>gi|264677753|ref|YP_003277659.1| protein tolB [Comamonas testosteroni CNB-2]
 gi|299529321|ref|ZP_07042760.1| translocation protein TolB [Comamonas testosteroni S44]
 gi|262208265|gb|ACY32363.1| protein tolB [Comamonas testosteroni CNB-2]
 gi|298722699|gb|EFI63617.1| translocation protein TolB [Comamonas testosteroni S44]
          Length = 417

 Score =  385 bits (988), Expect = e-105,   Method: Composition-based stats.
 Identities = 107/412 (25%), Positives = 187/412 (45%), Gaps = 14/412 (3%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
             +V       + + IA  +F        K+S ++  DL+RS  F  +          + 
Sbjct: 16  QFRVEVTGVGLTQLPIAIAQFKGEGSAPQKISAIIQADLERSGQFRGVDASGL---ALDE 72

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
            S P    W   GA  L TG + +    R  V FRLWDV   + + G+ F  +    R +
Sbjct: 73  TSRPDVAQWRQKGADSLATGSITRLADGRWDVRFRLWDVVKGQDLGGQGFAVTTGDLRLV 132

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH I+D IY+ +TGEKG F++RI +V+++         L + D DG N +    S + I+
Sbjct: 133 AHRIADYIYEKLTGEKGIFSTRIAYVTKAGA----HYRLWIADADGENAQSALSSPEPII 188

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P ++PN  ++AY +++    + VY+ D       + + NFR    AP +S +G R  +
Sbjct: 189 -SPAWAPNGTQLAYVSFESRKPV-VYVHDVASG-HRRLLANFRGSNSAPAWSPDGSRLAV 245

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ +D    +Y +  Q     RL  +  I+    +S D   I F SDR G  Q+Y + S+
Sbjct: 246 TLSRDGGSQLYLLSAQGGEPRRLMQSSGIDTEPCFSSDGRTIYFVSDRGGAPQVYKVSSS 305

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G   +R++     +   P  SP G  +A+    G  F + VM         + + +  ++
Sbjct: 306 GGSAERVTFTGNYN-ISPAISPDGKWLAYISRVGGGFKLQVMDLATGTVNSVTDTTADES 364

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
           P+++P+ R ++++  + G     L +  L+G+    L        +P W  F
Sbjct: 365 PSFAPNSRLIVYATIQGGR--EALMTTTLDGKIKARLAGASGDIREPDWGPF 414



 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 76/185 (41%), Gaps = 11/185 (5%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R     +      ++  D      +   ++    IS +++P+ +Q+ + S    K  +Y
Sbjct: 153 TRIAYVTKAGAHYRLWIADADGENAQSALSSPEPIISPAWAPNGTQLAYVSFESRKPVVY 212

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V        +R+  +   S   P WSP G  +A T        + ++   G + R L++ 
Sbjct: 213 VHDVASG-HRRLLANFRGSNSAPAWSPDGSRLAVTLSRDGGSQLYLLSAQGGEPRRLMQS 271

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQ 441
           S +   P +S  GR++ F   + G    ++Y +  +G +   +        +PA + D +
Sbjct: 272 SGIDTEPCFSSDGRTIYFVSDRGG--APQVYKVSSSGGSAERVTFTGNYNISPAISPDGK 329

Query: 442 WVGFM 446
           W+ ++
Sbjct: 330 WLAYI 334


>gi|254448714|ref|ZP_05062172.1| Tol-Pal system beta propeller repeat protein TolB [gamma
           proteobacterium HTCC5015]
 gi|198261722|gb|EDY86009.1| Tol-Pal system beta propeller repeat protein TolB [gamma
           proteobacterium HTCC5015]
          Length = 442

 Score =  385 bits (988), Expect = e-104,   Method: Composition-based stats.
 Identities = 108/445 (24%), Positives = 216/445 (48%), Gaps = 11/445 (2%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSAN--YSPVSIAFTKFVSIDELGGK 64
           + +   +     +  + +   F  +  A +++    ++    P++I   ++     L   
Sbjct: 3   LLQRTAVSTFCFVSFLCVSLGFSGAAQAVLEIRITQSSDLARPIAIVPFEWQGEQALPTD 62

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           VS VV  DL+RS  F  ++++    K  +  S   +Q+W +L    L+ G++   G+ R 
Sbjct: 63  VSSVVRTDLERSGQFKALAEEDMLAKP-SAGSRINWQNWRTLEMPHLLVGKIRSTGEGRY 121

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            V+ +L+DV   +Q++G  + ++  + R+ AH ++D++Y+ ITG +G F++RI FVS   
Sbjct: 122 AVDVQLFDVNRGRQLLGYSYPATAKTLRRTAHKVADEVYEEITGVRGAFSTRIAFVSVET 181

Query: 185 VSGIIKN-SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            S   +  SL V D DG   R +  S   I   P +SP+   +AY ++ +     V+ ++
Sbjct: 182 RSAKDRTFSLQVADADGHAPRTVVRSSQPI-LSPTWSPDGMHLAYVSFRNRQA-EVFAVN 239

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R  +  +++  F  +  AP FS +G +  +++ +    DIY +D+++   +++T    I
Sbjct: 240 LRTGKE-QKLSGFDGINGAPAFSPDGNQLAMALSRSGNPDIYVLDMKTRQLKQITRGYSI 298

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               S+S D   + + S R G  Q+Y + + G   KR+S +   +      SP G  +A 
Sbjct: 299 ETEPSWSSDGDTLYYTSGRTGSPQIYAVSARGGTPKRVSFEGGYNASAAA-SPDGRNLAM 357

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  + I V        R+L +    ++P+++P+G+ L+++ +K G     L ++ L
Sbjct: 358 VHSQRGSYRIAVKDLKSDLFRVLTDGPQDESPSFAPNGQMLLYATQKGGKG--VLAAVSL 415

Query: 424 NGR-NETLINTPAYASDPQWVGFMD 447
           +GR  + L+ T     +P W  F +
Sbjct: 416 DGRVKQELLLTEGDIREPAWSPFNN 440


>gi|238756016|ref|ZP_04617340.1| hypothetical protein yruck0001_31470 [Yersinia ruckeri ATCC 29473]
 gi|238705741|gb|EEP98134.1| hypothetical protein yruck0001_31470 [Yersinia ruckeri ATCC 29473]
          Length = 413

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 99/420 (23%), Positives = 190/420 (45%), Gaps = 13/420 (3%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K++       ++  +V+ DL+ S  FN I      Q
Sbjct: 2   LHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEEIGSIVAADLRNSGKFNPIDVARMPQ 61

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSS 147
           + +    +     W +LG   +V G+V         V ++L D        +   ++  +
Sbjct: 62  QPSTAAEV-TPAAWTALGIDAVVVGQVQPGADGSYLVSYQLVDTAGAAGSILAQNQYKIT 120

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
               R  AHT SD++++ +TG KG F +RI +V ++   G   + L V D DG N +++ 
Sbjct: 121 KQWLRYSAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGKFPHELRVSDYDGYN-QFVV 178

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               + L  P +S +  K+AY T++        ++ T  + A K++ +F     AP FS 
Sbjct: 179 HRSPEPLMSPAWSADGSKIAYVTFESGK--SALVIQTLANGAIKQVASFPRHNGAPAFSP 236

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +   ++ K  ++++Y ++L S    ++T+    N   S+ PDS  + + SD+ G+ Q
Sbjct: 237 DGTKLAFALSKSGSLNLYVMNLASGQISQVTDGRSNNTEPSWFPDSQNLAYTSDQGGRPQ 296

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y +  NG   +RI+ +   +    V S  G  +A    S     I     +    ++L 
Sbjct: 297 VYKVNINGGAPQRITWEGSQNQNADV-SADGKFLALVSSSSGSQHIAKQDLETGAVQVLT 355

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           +    + P+ +P+G  +I+S  +    GS L  +  +GR +  L  T      P W  ++
Sbjct: 356 DTFLDETPSIAPNGTMVIYSSTQG--LGSVLQLVSTDGRFKARLPATDGQVKFPAWSPYL 413


>gi|217973704|ref|YP_002358455.1| translocation protein TolB [Shewanella baltica OS223]
 gi|254764842|sp|B8EAK3|TOLB_SHEB2 RecName: Full=Protein tolB; Flags: Precursor
 gi|217498839|gb|ACK47032.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           baltica OS223]
          Length = 442

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 111/450 (24%), Positives = 201/450 (44%), Gaps = 24/450 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVS 70
           M+I L   L L      T   A + +       +   IA   F           +++VV 
Sbjct: 1   MRI-LAKWLALAVLLCTTPAKAALDIVITEGVDAARPIAVMPFVWQGPGAAPQAIADVVM 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F  + +    Q+     +  +   W+S+GA+ LV G V   G D+  V F L
Sbjct: 60  SDLVRSGTFKPLDELGLPQRNIGTAAQFQANSWSSVGAEALVLGTVKPYGTDQYLVSFDL 119

Query: 131 WDVKDRK-------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            D+   +              +  ++   S A +R+  H ISD +Y+ +TG +G F +RI
Sbjct: 120 IDLVKAQNQALKGPVSATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGIRGAFLTRI 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V  +  +      L V D DG N + L  S +  L  P +SP+ +++AY +++++   
Sbjct: 180 SYVVVN-HTQKAPYQLMVADYDGVNEQMLLRSPEP-LMSPTWSPDGRRLAYVSFENKKA- 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ D    +   ++ +F  +  AP FS +GK   I++ KD   +IY +D+ + A +R+
Sbjct: 237 EIFVQDLYT-QVRTKVSSFPGINGAPAFSPDGKSLAITLSKDGQPEIYIIDIATKAIKRI 295

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN   I+   S+ PD   ++F S+R G+ Q+Y ++ +     R + + E +      +P 
Sbjct: 296 TNHYAIDTEPSWYPDGKSLIFTSERGGRPQIYRVELSSGKVSRETFEGEWNLGG-SITPD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+     G     
Sbjct: 355 GRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTYQGKQ--V 412

Query: 418 LYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           L ++  +GR +  L         P W  F+
Sbjct: 413 LAAVSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|304409844|ref|ZP_07391464.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           baltica OS183]
 gi|307304200|ref|ZP_07583953.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           baltica BA175]
 gi|304352362|gb|EFM16760.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           baltica OS183]
 gi|306913098|gb|EFN43521.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           baltica BA175]
          Length = 442

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 111/450 (24%), Positives = 201/450 (44%), Gaps = 24/450 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVS 70
           MKI L   L L      T   A + +       +   IA   F           +++VV 
Sbjct: 1   MKI-LAKWLALAVLLCTTPAKAALDIVITEGVDAARPIAVMPFVWQGPGAAPQAIADVVM 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F  + +    Q+     +  +   W+S+GA+ LV G V   G D+  V F L
Sbjct: 60  SDLVRSGTFKPLDELGLPQRNIGTVAQFQANSWSSVGAEALVLGTVKPYGTDQYLVSFDL 119

Query: 131 WDVKDRK-------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            D+   +              +  ++   S A +R+  H ISD +Y+ +TG +G F +RI
Sbjct: 120 IDLVKAQNQALKGPVSATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGIRGAFLTRI 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V  +  +      L V D DG N + L  S +  L  P +SP+ +++AY +++++   
Sbjct: 180 SYVVVN-HTQKAPYQLMVADYDGVNEQMLLRSPEP-LMSPTWSPDGRRLAYVSFENKKA- 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ D    +   ++ +F  +  AP FS +GK   +++ KD   +IY +D+ + A +R+
Sbjct: 237 EIFVQDLYT-QVRTKVSSFPGINGAPAFSPDGKSLAVTLSKDGQPEIYIIDIATKAIKRI 295

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN   I+   S+ PD   ++F S+R G+ Q+Y ++ +     R + + E +      +P 
Sbjct: 296 TNHYAIDTEPSWYPDGKSLIFTSERGGRPQIYRVELSSGKVSRETFEGEWNLGG-SITPD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+     G     
Sbjct: 355 GRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTYQGKQ--V 412

Query: 418 LYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           L ++  +GR +  L         P W  F+
Sbjct: 413 LAAVSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|242238602|ref|YP_002986783.1| translocation protein TolB [Dickeya dadantii Ech703]
 gi|242130659|gb|ACS84961.1| Tol-Pal system beta propeller repeat protein TolB [Dickeya dadantii
           Ech703]
          Length = 428

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 103/438 (23%), Positives = 193/438 (44%), Gaps = 18/438 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID-ELGGKVSEVVSK 71
           +KI L  L+      +   +HA V++       S   IA   F S    +   +  +V+ 
Sbjct: 5   LKIALSFLM-----LWAAVLHAEVRIEITQGVDSARPIAVVPFKSAGGAVPEDIGNIVAA 59

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  FN I      Q+      +     W +LG   ++ G+V         + ++L 
Sbjct: 60  DLRNSGKFNPIDPSRMPQQPGTAAEV-TPAAWTALGIDAVIVGQVQPTADG-YLISYQLV 117

Query: 132 DVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           D        +   +F  +    R  AHT SD+++Q +TG KG F +RI +V ++   G  
Sbjct: 118 DTSGSAGSVLAQNQFKVTRQWLRYAAHTASDEVFQKLTGIKGAFRTRIAYVVQTN-GGQY 176

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L V D DG N +++     + L  P +SP+  K+AY T++        ++ T  +  
Sbjct: 177 PYELRVADYDGYN-QFVVHRSPEPLMSPSWSPDGSKLAYVTFESGR--SALVIQTLANGD 233

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +++ +F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N   ++
Sbjct: 234 IRQVASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMNLGSGQISQITDGRSNNTEPTW 293

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PDS  + + SD+ G+ Q+Y + +NG   +R++ +   +    V S  G  I     +  
Sbjct: 294 FPDSQTLAYTSDQAGRPQIYKIGANGGTPQRLTWEGAQNQDSEVSS-DGKFIVMVSSNSG 352

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE- 428
              I          ++L +    + P+ +P+G  +I+S K+    GS L  +  +GR + 
Sbjct: 353 AQHIAKQDLVTGGVQVLTDTFLDETPSIAPNGTMVIYSSKQG--LGSVLQLVSTDGRFKA 410

Query: 429 TLINTPAYASDPQWVGFM 446
            L  T      P W  ++
Sbjct: 411 RLPATDGQVRFPAWSPYL 428


>gi|160874900|ref|YP_001554216.1| translocation protein TolB [Shewanella baltica OS195]
 gi|189035987|sp|A9KY50|TOLB_SHEB9 RecName: Full=Protein tolB; Flags: Precursor
 gi|160860422|gb|ABX48956.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           baltica OS195]
 gi|315267137|gb|ADT93990.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           baltica OS678]
          Length = 442

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 112/450 (24%), Positives = 201/450 (44%), Gaps = 24/450 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVS 70
           MKI L   L L      T   A + +       +   IA   F           +++VV 
Sbjct: 1   MKI-LAKWLALAVLLCTTPAKAALDIVITEGVDAARPIAVMPFVWQGPGAAPQAIADVVM 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F  + +    Q+     +  +   W+S+GA+ LV G V   G D+  V F L
Sbjct: 60  SDLVRSGTFKPLDELGLPQRNIGTVAQFQANSWSSVGAEALVLGTVKPYGTDQYLVSFDL 119

Query: 131 WDVKDRK-------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            D+   +              +  ++   S A +R+  H ISD +Y+ +TG +G F +RI
Sbjct: 120 IDLVKAQNQALKGPVSATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGIRGAFLTRI 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V  +  +      L V D DG N + L  S +  L  P +SP+ +++AY +++++   
Sbjct: 180 SYVVVN-HTQKAPYQLMVADYDGVNEQMLLRSPEP-LMSPTWSPDGRRLAYVSFENKKA- 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ D    +   ++ +F  +  AP FS +GK   I++ KD   +IY +D+ + A +R+
Sbjct: 237 EIFVQDLYT-QVRTKVSSFPGINGAPAFSPDGKSLAITLSKDGQPEIYIIDIATKAIKRI 295

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN   I+   S+ PD   ++F S+R G+ Q+Y ++ +     R + + E +      +P 
Sbjct: 296 TNHYAIDTEPSWYPDGKSLIFTSERGGRPQIYRVELSSGKVSRETFEGEWNLGG-SITPD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+     G     
Sbjct: 355 GRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTYQGKQ--V 412

Query: 418 LYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           L ++  +GR +  L         P W  F+
Sbjct: 413 LAAVSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|126173975|ref|YP_001050124.1| translocation protein TolB [Shewanella baltica OS155]
 gi|166988081|sp|A3D3E2|TOLB_SHEB5 RecName: Full=Protein tolB; Flags: Precursor
 gi|125997180|gb|ABN61255.1| TolB, N-terminal domain protein [Shewanella baltica OS155]
          Length = 442

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 111/450 (24%), Positives = 201/450 (44%), Gaps = 24/450 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVS 70
           M+I L   L L      T   A + +       +   IA   F           +++VV 
Sbjct: 1   MRI-LAKWLALAVLLCTTPAKAALDIVITEGVDAARPIAVMPFVWQGSGAAPQAIADVVM 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F  + +    Q+     +  +   W+S+GA+ LV G V   G D+  V F L
Sbjct: 60  SDLVRSGTFKPLDELGLPQRNIGTAAQFQANSWSSVGAEALVLGTVKPYGTDQYLVSFDL 119

Query: 131 WDVKDRK-------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            D+   +              +  ++   S A +R+  H ISD +Y+ +TG +G F +RI
Sbjct: 120 IDLVKAQNQALKGPVSATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGIRGAFLTRI 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V  +  +      L V D DG N + L  S +  L  P +SP+ +++AY +++++   
Sbjct: 180 SYVVVN-HTQKAPYQLMVADYDGVNEQMLLRSPEP-LMSPTWSPDGRRLAYVSFENKKA- 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ D    +   ++ +F  +  AP FS +GK   I++ KD   +IY +D+ + A +R+
Sbjct: 237 EIFVQDLYT-QVRTKVSSFPGINGAPAFSPDGKSLAITLSKDGQPEIYIIDIATKAIKRI 295

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN   I+   S+ PD   ++F S+R G+ Q+Y ++ +     R + + E +      +P 
Sbjct: 296 TNHYAIDTEPSWYPDGKSLIFTSERGGRPQIYRVELSSGKVSRETFEGEWNLGG-SITPD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+     G     
Sbjct: 355 GRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTYQGKQ--V 412

Query: 418 LYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           L ++  +GR +  L         P W  F+
Sbjct: 413 LAAVSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|12084602|pdb|1C5K|A Chain A, The Structure Of Tolb, An Essential Component Of The Tol-
           Dependent Translocation System And Its Interactions With
           The Translocation Domain Of Colicin E9
 gi|114794794|pdb|2IVZ|A Chain A, Structure Of Tolb In Complex With A Peptide Of The Colicin
           E9 T-Domain
 gi|114794795|pdb|2IVZ|B Chain B, Structure Of Tolb In Complex With A Peptide Of The Colicin
           E9 T-Domain
 gi|114794796|pdb|2IVZ|C Chain C, Structure Of Tolb In Complex With A Peptide Of The Colicin
           E9 T-Domain
 gi|114794797|pdb|2IVZ|D Chain D, Structure Of Tolb In Complex With A Peptide Of The Colicin
           E9 T-Domain
          Length = 439

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 100/446 (22%), Positives = 197/446 (44%), Gaps = 20/446 (4%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGG 63
            + + L +     +L       + + +HA V++  +S      P+ +   ++        
Sbjct: 1   MMKQALRVAFGFLIL-------WASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPE 53

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
            +  +V+ DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V       
Sbjct: 54  DIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGS 112

Query: 124 LRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             V ++L D        +    +  +    R   HT SD++++ +TG KG F +RI +V 
Sbjct: 113 YNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVV 172

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++   G     L V D DG N +++     Q L  P +SP+  K+AY T++        +
Sbjct: 173 QTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALV 228

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           + T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+  
Sbjct: 229 IQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR 288

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             N   ++ PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +
Sbjct: 289 SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFM 347

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                +G +  I          ++L      + P+ +P+G  +I+S  +    GS L  +
Sbjct: 348 VMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLV 405

Query: 422 DLNGRNE-TLINTPAYASDPQWVGFM 446
             +GR +  L  T      P W  ++
Sbjct: 406 STDGRFKARLPATDGQVKFPAWSPYL 431


>gi|149927732|ref|ZP_01915984.1| translocation protein TolB precursor [Limnobacter sp. MED105]
 gi|149823558|gb|EDM82788.1| translocation protein TolB precursor [Limnobacter sp. MED105]
          Length = 445

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 118/438 (26%), Positives = 208/438 (47%), Gaps = 14/438 (3%)

Query: 12  NMKINLCLLLVLIGGFFPT-SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            ++ +  +LL        T    A +K+       + ++ +   F     L   + +V+ 
Sbjct: 19  RLRRSASILLAFFALVTMTVPAQAQLKIDITGVGANQIAFSAAPFQGNQGLPEDIKKVIE 78

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F  I+  S  +   N  ++     W S+G   L+ G V K    RL + F L
Sbjct: 79  DDLVRSGFFRSINTTSNVE--LNESTLIDPSAWKSIGVDALIVGSVKKLPDGRLDLRFNL 136

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
            D   +K +    +  +P++ R  AH I+D +Y+ + GEKG F++R+ +V         +
Sbjct: 137 HDTAQQKSLGKFSYVIAPSALRLHAHKIADFVYEKMLGEKGVFSTRLAYVE----KAPGR 192

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L + D DGAN +    S++ I+  P +SP+  ++AY +++      V  + T      
Sbjct: 193 YRLIIADADGANPQVALASKEPII-SPAWSPDGTQLAYVSFETRKP--VVFVHTLATGRR 249

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           K + NF+    AP +SSNG++  + + KD    I+S++   ++  RLT+T  IN   +YS
Sbjct: 250 KALANFKGSNSAPAWSSNGQQLAVVLTKDGGSQIFSMNADGSSLNRLTSTGGINTEPAYS 309

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D   I F SDR G  Q+Y M +NG D  R++ +   +   P  SP    + +      +
Sbjct: 310 HDGRSIYFTSDRGGGPQIYRMSTNGGDATRVTFEGGYN-ISPRISPDDKTLTYVTRRDGQ 368

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-T 429
           F I  +   G  E LL      ++P+++P+GR ++++ K  G     L  +  +GR + T
Sbjct: 369 FRIAALDLAGGTEMLLTNTGRDESPSFAPNGRYILYATKSGGKGT--LAVVSKDGRIKYT 426

Query: 430 LINTPAYASDPQWVGFMD 447
           L ++ A  S+P W  F++
Sbjct: 427 LSSSGADISEPTWGPFIN 444


>gi|310767030|gb|ADP11980.1| translocation protein TolB [Erwinia sp. Ejp617]
          Length = 430

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 197/445 (44%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +++ +L V          HA V++          P+ +   K+         
Sbjct: 1   MKQAFRVALSVLMLFV-------AVAHAEVRIEITQGVNTARPIGVVPFKWDGPGAAPED 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V+ DL+ S  FN I +    Q+ T+   + +   W +LG   ++ G+V        
Sbjct: 54  IGGIVAADLRNSGKFNPIDRARLPQQPTSVAEV-QPAAWTALGIDAVIVGQVQPGADGSY 112

Query: 125 RVEFRLWDV-KDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D   ++  ++ +  F     W R  AHT SD+ ++ +T  KG F +RI +V +
Sbjct: 113 TVSYQLVDTSGNQGAVLAQNQFKVTKQWLRYAAHTASDESFEKLTAIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G     L V D DG N +++     Q L  P +SP+  KVAY T++        ++
Sbjct: 173 TN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTFESGK--SALVI 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+  +
Sbjct: 229 QTLANGAIRQVASFPRHNGAPSFSPDGSKLAFALSKTGSLNLYVMDVGSGQIRQITDGRY 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +   ++ PDS  + + SD+ G+ Q+Y +  NG   +RI+ D   +  D   S  G  + 
Sbjct: 289 NSTEPTWFPDSQSLAYTSDQAGRPQIYKIGVNGGTAQRITWDGAQNQ-DADVSSDGKSMV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +     +          + L +    + P+ +P+G  +I+S  +    GS L  + 
Sbjct: 348 MISTNSGAQHVARQDLVTGAVQQLTDTFLDETPSLAPNGTMVIYSSTQG--MGSVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKFPAWSPYL 430


>gi|241662341|ref|YP_002980701.1| translocation protein TolB [Ralstonia pickettii 12D]
 gi|240864368|gb|ACS62029.1| Tol-Pal system beta propeller repeat protein TolB [Ralstonia
           pickettii 12D]
          Length = 434

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 115/419 (27%), Positives = 191/419 (45%), Gaps = 18/419 (4%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
            HA + V  +    S   IA   F    +    +S +V  DL RS  F+ +        +
Sbjct: 29  AHAQLNVEISGVGASQYPIAIANFQGEAQAPQNLSAIVRADLARSGRFSNVDVAGA---V 85

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
                 P    W S GA   V G V + G DR  + FRL+D    + + G      P   
Sbjct: 86  VPESPAPDLGAWKSKGAAAFVGGTVTRNG-DRYEIRFRLYDTAKGESLGGLSLTRGPGQL 144

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R  AH I+D IYQ + GE+G F +R+ +VS+       +  L + D DGAN +    S +
Sbjct: 145 RLAAHEIADYIYQKLIGERGVFATRLSYVSKVG----RRFQLQISDSDGANPQIALTSNE 200

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I+  P +SP+  KVAY +++ +  + VY+ D    R    I N +    AP +S +G+ 
Sbjct: 201 PII-SPSWSPDGTKVAYVSFESKKPV-VYVHDLVAGR-RTVISNQKGNNSAPAWSPDGRH 257

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +S+ +D    +Y V+   +   RL+ +  I+   S+SPD   I F SDR G  Q+Y M
Sbjct: 258 VAVSLSRDGNTQVYLVNADGSGLRRLSRSSAIDTEPSFSPDGRYIYFTSDRGGAPQIYRM 317

Query: 332 QSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             +G      +R++     +   P  SP G L+A+    G  F +            L +
Sbjct: 318 SVDGEEAGAAQRVTFKGNYN-TSPRVSPDGKLLAYISRVGGAFRLYTQDLSNGDVNALTD 376

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVGFM 446
            SN ++P+++ +G+ ++++ +  G   S L ++  +GR   +++       +P W  FM
Sbjct: 377 TSNDESPSFAANGKFILYATRVGGK--SVLAAVSTDGRTRQVLSLQAGEVREPAWGPFM 433


>gi|157374996|ref|YP_001473596.1| TolB domain-containing protein [Shewanella sediminis HAW-EB3]
 gi|189035990|sp|A8FUE5|TOLB_SHESH RecName: Full=Protein tolB; Flags: Precursor
 gi|157317370|gb|ABV36468.1| TolB, N-terminal domain protein [Shewanella sediminis HAW-EB3]
          Length = 442

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 110/443 (24%), Positives = 206/443 (46%), Gaps = 23/443 (5%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
            LVL      + + A + +          P+++    +        ++S+VV  DL RS 
Sbjct: 7   WLVLGLVILSSPVRAALDIVITEGIDAARPIAVVPFVWQGQGPAPQQISDVVMSDLTRSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F  + + S  Q+  +  S  + +DW ++GA+ +V G +   G+D+  V F L D+   +
Sbjct: 67  TFKTLDELSLPQRNISAISQFQAKDWANVGAEAVVMGAIKPYGEDKYLVSFDLVDLVKAQ 126

Query: 138 Q-------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
                         I  ++   S A +R+  H ISD IY+ +TG +G F +RI +V    
Sbjct: 127 MQSGTGPQSKQEFLIDSRETVISSAQFRQYGHRISDIIYEKLTGIRGAFLTRIAYVVVKH 186

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L + D DG N + L  S +  L  P +SP+ +++AY +++++    +++ D 
Sbjct: 187 GE-KSPYQLMISDYDGHNEQMLLRSPEP-LMSPSWSPDGRQLAYVSFENKKA-EIFIQDI 243

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 K I +F  +  AP FS +GK+  +++ KD   +IY VD+ + A +R+TN   I+
Sbjct: 244 YTQSRSK-ITSFAGINGAPVFSPDGKKLALTLSKDGQPEIYVVDISTKALKRVTNHYAID 302

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             AS+ PD   ++F S+R G+ Q+Y +       +R++ + E +    +  P G  + F 
Sbjct: 303 TEASWFPDGKSLIFTSERGGRPQIYKVTLASGKVQRMTFEGEWNLGGSIL-PDGRSMIFV 361

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +  K+ I  M  +    ++L      ++P+ +P+G  +I+     G     L ++  +
Sbjct: 362 NRTNGKYNIARMDLETRFMQVLTSTRLDESPSVAPNGTMVIYGTTYQGKQ--VLAAVSTD 419

Query: 425 GRNETLINTP-AYASDPQWVGFM 446
           GR +  + T       P W  F+
Sbjct: 420 GRFKARLPTGQGEVKSPSWSPFL 442


>gi|271499764|ref|YP_003332789.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Dickeya dadantii Ech586]
 gi|270343319|gb|ACZ76084.1| Tol-Pal system beta propeller repeat protein TolB [Dickeya dadantii
           Ech586]
          Length = 428

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 105/438 (23%), Positives = 193/438 (44%), Gaps = 18/438 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID-ELGGKVSEVVSK 71
           +KI L  L+      +   +HA V++       S   I    F S    +  ++  +V+ 
Sbjct: 5   LKIALSFLM-----LWTAVLHAEVRIEITQGVDSARPIGVVPFKSTGGAVPEEIGSIVAA 59

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  FN I      Q+      +     W +LG   +V G+V         V ++L 
Sbjct: 60  DLRNSGKFNPIDPSRMPQQPGTAAEV-TPSAWTALGIDAVVVGQVQPTADG-YLVSYQLV 117

Query: 132 DV--KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           D        +   +F  +    R  AHT SD++++ +TG KG F +RI +V ++   G  
Sbjct: 118 DTSGNAGSVLAQNQFKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQY 176

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L V D DG N +++     + L  P +SP+  K+AY T++        ++ T  +  
Sbjct: 177 PYELRVADYDGYN-QFVVHRSPEPLMSPAWSPDGSKLAYVTFESGR--SALVVQTLANGD 233

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I +F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N   ++
Sbjct: 234 IRQIASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMNLGSGQISQVTDGRSNNTEPTW 293

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PDS  + + SD+ G+ Q+Y +  NG   +R++ +   +  D   S  G  +     +G 
Sbjct: 294 FPDSQTLAYTSDQAGRPQIYKIGINGGAPQRLTWEGAQNQ-DAEISSDGKFLVMVSSNGG 352

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE- 428
              I          ++L +    + P+ +P+G  +I+S K+    GS L  +  +GR + 
Sbjct: 353 AQHIAKQDLVTGGVQVLTDTFLDETPSIAPNGTMVIYSSKQG--LGSVLQLVSTDGRFKA 410

Query: 429 TLINTPAYASDPQWVGFM 446
            L  T      P W  +M
Sbjct: 411 RLPATDGQVRFPTWSPYM 428


>gi|254229963|ref|ZP_04923365.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio sp. Ex25]
 gi|151937532|gb|EDN56388.1| Tol-Pal system beta propeller repeat protein TolB [Vibrio sp. Ex25]
          Length = 450

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 100/458 (21%), Positives = 194/458 (42%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L L + ++        +A +++       +  P+++   K+     L   +S V++
Sbjct: 1   MIRRLLLGMFVLFSSMTNVANAALELVITDGIDSARPIAVVPFKWEGTQALPTDISAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ +      Q   +   +  F  W +LG   L+TG + +  +    + ++L
Sbjct: 61  SDLQRSGKFSPVPTSKMPQTPFSESEV-NFDAWTNLGVDALLTGSIKQNAQGDYVINYQL 119

Query: 131 WDVKDRKQIIGKK---------------------FFSSPASWRKIAHTISDDIYQSITGE 169
            D+   +   GK                              R+ AH ISD +Y+ +TG+
Sbjct: 120 VDIVRGQLTGGKSKALGSDGELVLSKDHVLFNKVATVQGPRMREYAHRISDLVYEQLTGD 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V  +         L V D DG N R +  S+ Q L  P +SP+ +K+AY 
Sbjct: 180 RGAFMTRIAYVVVN-DKDRFPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGKKLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +++M+       ++I ++     APRFS +G +  I + K  ++ +Y+ DL
Sbjct: 238 SFQNGQA-EIFIMNIYTGE-REKITSYPRHNGAPRFSPDGNKLAIVLSKTGSLHVYTFDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +    ++T     N    + PD   ++F SDR GK Q+Y +        R++     + 
Sbjct: 296 NTRKLTQITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLGSGSIDRLTWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   F +     +    ++L +    ++P+ +P+G  +++S  
Sbjct: 356 GGQ-ITPDGRFLVMVNRSNAGFNLAKQDLETGALQVLTKTLLDESPSIAPNGGMVVYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +      L  + ++GR +  L  T      P W  F+
Sbjct: 415 YNKKN--VLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|56476928|ref|YP_158517.1| translocation protein TolB [Aromatoleum aromaticum EbN1]
 gi|67461905|sp|Q5P4Z6|TOLB_AZOSE RecName: Full=Protein tolB; Flags: Precursor
 gi|56312971|emb|CAI07616.1| tolB protein precursor, periplasmic component of the Tol biopolymer
           transport system [Aromatoleum aromaticum EbN1]
          Length = 426

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 103/415 (24%), Positives = 199/415 (47%), Gaps = 14/415 (3%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
             A + +    A  +   +A   F +   L   +++VV  DL+RS +F+L+         
Sbjct: 23  AQAQLSIEITGAGATRFPVAIPLFENEGSLPRGITDVVRADLERSGLFSLVD---MGLVT 79

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
               ++P      + GA  ++ G +  +   R  V FRL+D + + ++ G     +PA  
Sbjct: 80  LPATAVPDLAGVRARGADAVLAGSLYPQADGRYDVRFRLFDTQKQTELGGLSLRMTPAQN 139

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R  AH I+D +Y+ +TG+ G F +RI +V +S      +  L + D DG N +    SR+
Sbjct: 140 RATAHRIADFVYEKLTGQPGYFATRIAYVVKSGP----RYELQIADADGMNAQTALASRE 195

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I+  P ++P+ Q++AY +++ +    V  + T        + NF+    AP ++ +G+R
Sbjct: 196 PII-SPAWAPDGQRLAYVSFEAKKP--VVYVHTLATGQRHVVANFKGSNSAPTWAPDGQR 252

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             + + KD    +Y ++   +   R+  +  I+   ++SPD   I F SDR G  Q+Y +
Sbjct: 253 LAVVLTKDGQSQLYVLNADGSGLRRMATSPGIDTEPAWSPDGEWIYFSSDRGGSAQIYRI 312

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            ++G   +R++ +   +   P  SP G  +AF   +  +F + VM     Q  +L + S 
Sbjct: 313 PASGGSAQRVTFEGNYNVT-PRLSPDGRSLAFITRNNGRFQVAVMDLATRQTTILTDSSR 371

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
            ++P+++P+GR ++++ +  G     L ++  +GR  + L    A   +P W   
Sbjct: 372 DESPSFAPNGRMILYATESGGRG--VLAAVSSDGRVKQRLSVQAADVREPSWGPL 424


>gi|88861314|ref|ZP_01135945.1| outer membrane protein [Pseudoalteromonas tunicata D2]
 gi|88816693|gb|EAR26517.1| outer membrane protein [Pseudoalteromonas tunicata D2]
          Length = 451

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 108/465 (23%), Positives = 212/465 (45%), Gaps = 39/465 (8%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           +         LCLL+        + + A +++       +  P+ +   K++ + +  G 
Sbjct: 1   MFNRFKYLAGLCLLIA------SSQLFAALEIFITEGVNSARPIGVVPFKYIGVGQAPGD 54

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +S+V++ DL+RS  FN I+  +  QK +  D    +  W   G + +V G++ ++   R 
Sbjct: 55  ISDVIAADLRRSGKFNPIATINMPQKPSK-DGEVDYGAWAQEGIEAIVVGQIEQQTGGRY 113

Query: 125 RVEFRLWDVKDRKQIIGK--------------------KFFSSPASWRKIAHTISDDIYQ 164
            V + L DV   +   G+                    +   +  S+R+  H ISD +Y+
Sbjct: 114 LVSYELIDVLRGQLTGGQTQMLSNGKLVNNQDHILDARQTVITDDSFRRYGHRISDVVYE 173

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           ++TGE+G F +++ +V        +   L V D DG N + L  S++  L  P +SP+  
Sbjct: 174 ALTGERGAFLTKVAYVIVR-DDQAMPYQLVVADYDGYNEQVLLRSKEP-LMSPDWSPDGT 231

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAM 282
           K+AY T+++    ++Y+ D    +  +R+ +   +  AP+FS +G +  + + KD   A 
Sbjct: 232 KLAYVTFENRQS-QIYIQDIYTGK-RERLTSHPGINGAPKFSPDGTKLALVLSKDKDGAT 289

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +IY +DL++ A  R+T    I+   S+ P+  +IVF S+R G  Q+Y +       +R++
Sbjct: 290 EIYVMDLKTRAERRVTRHRSIDTEPSWHPNGQEIVFTSERGGNAQIYSVNLATGKTRRLT 349

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            D + +      +P G  +     +  ++ +   +      ++L      ++P+ +P+G 
Sbjct: 350 FDGDMNL-AGSITPDGKDLIMVNRTAGRYHLAKKELKTGDFQVLTATRLDESPSMAPNGS 408

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +I+S   D      L S+D  GR +  L         P W  F+
Sbjct: 409 MIIYSTLHDNKQVLALVSMD--GRFKARLPVANGQVKAPAWSPFL 451


>gi|24374289|ref|NP_718332.1| tolB protein [Shewanella oneidensis MR-1]
 gi|32699702|sp|Q8EDJ8|TOLB_SHEON RecName: Full=Protein tolB; Flags: Precursor
 gi|24348827|gb|AAN55776.1|AE015714_3 tolB protein [Shewanella oneidensis MR-1]
          Length = 442

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 109/450 (24%), Positives = 200/450 (44%), Gaps = 24/450 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSAN--YSPVSIAFTKFVSIDELGGKVSEVVS 70
           MKI L   L L+     T   A + +          P+++   ++         +++VV 
Sbjct: 1   MKI-LAKWLTLVVLLCTTPAKAALDIVITEGVDAARPIAVMPFQWQGAGAPPQAIADVVM 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F  + +    Q+     +      W ++ A+ LV G V   G D+  V F L
Sbjct: 60  SDLVRSGTFKPLDELGLPQRGIGALAQFDANAWTNVSAEALVVGSVKPYGADQFLVSFEL 119

Query: 131 WDVKDRK-------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            D+   +              +  ++   S   +R+  H ISD +Y+ +TG +G F +RI
Sbjct: 120 IDLVKAQNQALKGSANPTELLMDSRQTVISATQFRQYGHRISDIVYEKLTGIRGAFLTRI 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V  +  S     SL + D DG N + L  S +  L  P +SP+ +++AY +++++   
Sbjct: 180 SYVVVN-HSQKAAYSLMIADYDGYNEQMLLRSPEP-LMSPAWSPDGRRLAYVSFENKKA- 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ D    +   ++ +F  +  AP FS +GK   +++ KD   +IY +D+ + A +R+
Sbjct: 237 EIFVQDLYT-QVRTKVSSFSGINGAPSFSPDGKSLAVTLSKDGQPEIYVIDIATKAIKRI 295

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN   I+   S+ PD   ++F S+R G+ QLY +  N     R + + E +      +P 
Sbjct: 296 TNHYSIDTEPSWYPDGKSLLFTSERGGRPQLYRVDLNSGKVTRETFEGEWNLGG-SITPD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+     G     
Sbjct: 355 GRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTHQGKQ--V 412

Query: 418 LYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           L ++  +GR +  L         P W  F+
Sbjct: 413 LAAVSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|153000267|ref|YP_001365948.1| translocation protein TolB [Shewanella baltica OS185]
 gi|166988082|sp|A6WM46|TOLB_SHEB8 RecName: Full=Protein tolB; Flags: Precursor
 gi|151364885|gb|ABS07885.1| Tol-Pal system beta propeller repeat TolB [Shewanella baltica
           OS185]
          Length = 442

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 111/450 (24%), Positives = 201/450 (44%), Gaps = 24/450 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVS 70
           M+I L   L L      T   A + +       +   IA   F           +++VV 
Sbjct: 1   MRI-LAKWLALAVLLCTTPAKAALDIVITEGVDAARPIAVMPFVWQGPGAAPQAIADVVM 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F  + +    Q+     +  +   W+S+GA+ LV G V   G D+  V F L
Sbjct: 60  SDLVRSGTFKPLDELGLPQRNIGTVAQFQANSWSSVGAEALVLGTVKPYGTDQYLVSFDL 119

Query: 131 WDVKDRK-------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            D+   +              +  ++   S A +R+  H ISD +Y+ +TG +G F +RI
Sbjct: 120 IDLVKAQNQALKGPVSATEFLMDSRQTVISAAQFRQYGHRISDIVYEKLTGIRGAFLTRI 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V  +  +      L V D DG N + L  S +  L  P +SP+ +++AY +++++   
Sbjct: 180 SYVVVN-HTQKAPYQLMVADYDGVNEQMLLRSPEP-LMSPTWSPDGRRLAYVSFENKKA- 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ D    +   ++ +F  +  AP FS +GK   I++ KD   +IY +D+ + A +R+
Sbjct: 237 EIFVQDLYT-QVRTKVSSFPGINGAPAFSPDGKSLAITLSKDGQPEIYIIDIATKAIKRI 295

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN   I+   S+ PD   ++F S+R G+ Q+Y ++ +     R + + E +      +P 
Sbjct: 296 TNHYAIDTEPSWYPDGKSLIFTSERGGRPQIYRVELSSGKVSRETFEGEWNLGG-SITPD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+     G     
Sbjct: 355 GRSMIFVNRTNGKFNIARMDLSTRFMQVLTSTRLDESPSVAPNGTMVIYGTTYQGKQ--V 412

Query: 418 LYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           L ++  +GR +  L         P W  F+
Sbjct: 413 LAAVSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|227327556|ref|ZP_03831580.1| translocation protein TolB [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 430

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 100/441 (22%), Positives = 195/441 (44%), Gaps = 16/441 (3%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEV 68
           +   + + L  ++    +    HA V++       +  P+ +   K+         V  +
Sbjct: 1   MKQVLKVALSFLM---LWTAVAHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDVGGI 57

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V  DL+ S  FN I  +   Q+      +     W +LG   +V G+V         V +
Sbjct: 58  VGADLRNSGKFNPIDANRMPQQPATASEV-TPAAWTALGIDAVVVGQVQPSADGSYLVSY 116

Query: 129 RLWDVKDR-KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D       ++ +  F     W R  AHT SD++++ ++G KG F +RI +V ++   
Sbjct: 117 QLVDTSGNPGSVLAQNQFKVTKQWLRYAAHTASDEVFEKLSGIKGAFRTRIAYVVQTN-G 175

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     L V D DG N +++     Q L  P +S +  K+AY T++        ++ T  
Sbjct: 176 GQFPYELRVADYDGYN-QFVVHRSPQPLMSPAWSADGSKLAYVTFESGR--SALVIQTLA 232

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           + A +++ +F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N  
Sbjct: 233 NGAIRQVASFPRHNGAPSFSPDGSKLAFALSKSGSLNLYVMNLGSGQISQVTDGRSNNTE 292

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++ PDS  + + SD+ G+ Q+Y + +NG   +R++ +   +  D   S  G  +     
Sbjct: 293 PTWFPDSQTLAYTSDQAGRPQVYKVNANGGAPQRLTWEGSQNQ-DSDVSADGKFLVTVSS 351

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +G    I  +       ++L +    + P+ +P+G  +I+S K+    GS L  +  +GR
Sbjct: 352 NGGAQHISKLDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSKQG--LGSVLQLVSTDGR 409

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L  T      P W  ++
Sbjct: 410 FKARLPATDGQVKFPAWSPYL 430


>gi|300704850|ref|YP_003746453.1| protein tolb, component of the tol-pal system [Ralstonia
           solanacearum CFBP2957]
 gi|299072514|emb|CBJ43864.1| protein tolB, component of the tol-pal system [Ralstonia
           solanacearum CFBP2957]
          Length = 434

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 116/419 (27%), Positives = 189/419 (45%), Gaps = 18/419 (4%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
            HA + V  +    S   IA   F    +    ++ +V  DL RS  F+ +        +
Sbjct: 29  AHAQLNVEISGVGSSQYPIAVAHFQGETQAPENITAIVRSDLARSGRFSNVDVAGA---V 85

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
                 P    W + GA   V G V + G DR  + FRL+D    + + G          
Sbjct: 86  VPESPAPDLGAWKTRGAAAFVGGTVTRSG-DRYEIRFRLYDTAKGESLGGLSLTRGEGQL 144

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R  AH I+D IYQ + GE+G F +R+ +VS+          L + D DGAN +    S +
Sbjct: 145 RLAAHEIADFIYQKLMGERGVFATRLSYVSKVG----RHYQLQISDSDGANPQIALTSSE 200

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I+  P +SP+  KVAY +++    + VY+ D    R    I N +    AP +S +G+R
Sbjct: 201 PII-SPSWSPDGTKVAYVSFESRKPV-VYVHDLVTGR-RAVISNQKGNNSAPAWSPDGRR 257

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +++ +D    IY V+   +   RLT +  I+   S+SPD   I F SDR G  Q+Y M
Sbjct: 258 VAVALSRDGNTQIYLVNADGSGLRRLTRSSAIDTEPSFSPDGHSIYFTSDRGGAPQIYRM 317

Query: 332 QSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             +G      +R++     +   P  SP G L+A+    G  F + V          L +
Sbjct: 318 PVDGEDAGGAQRVTFKGGYN-TSPRVSPDGKLLAYISRVGGAFKLYVQDLSNGDVTGLTD 376

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVGFM 446
            S  ++P+++ +G+ ++++ +  G   S L ++  +GR  +TL        +P W  FM
Sbjct: 377 TSYDESPSFAANGKFILYATRVGGR--SVLAAVSTDGRTRQTLSLQAGQVREPAWGPFM 433


>gi|283479096|emb|CAY75012.1| Protein tolB precursor [Erwinia pyrifoliae DSM 12163]
          Length = 439

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 195/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +++ +L V          HA V++          P+ +   K+         
Sbjct: 10  MKQAFRVALSVLMLFV-------AVAHAEVRIEITQGVNTARPIGVVPFKWDGPGAAPED 62

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V+ DL+ S  FN I +    Q+ T+   + +   W +LG   ++ G+V        
Sbjct: 63  IGGIVAADLRNSGKFNPIDRARLPQQPTSVAEV-QPAAWTALGIDAVIVGQVQPGADGSY 121

Query: 125 RVEFRLWDVKDR-KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D       ++ +  F     W R  AHT SD+ ++ +T  KG F +RI +V +
Sbjct: 122 TVSYQLVDTSGNPGAVLAQNQFKVTKQWLRYAAHTASDESFEKLTAIKGAFRTRIAYVVQ 181

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G     L V D DG N +++     Q L  P +SP+  KVAY T++        ++
Sbjct: 182 TN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTFESGK--SALVI 237

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+  +
Sbjct: 238 QTLANGAIRQVASFPRHNGAPSFSPDGSKLAFALSKTGSLNLYVMDVGSGQIRQITDGRY 297

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +   ++ PDS  + + SD+ G+ Q+Y +  NG   +RI+ D   +  D   S  G  + 
Sbjct: 298 NSTEPTWFPDSQSLAYTSDQAGRPQIYKIGVNGGTAQRITWDGAQNQ-DADVSSDGKSMV 356

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +     +          + L +    + P+ +P+G  +I+S  +    GS L  + 
Sbjct: 357 MISTNSGAQHVARQDLVTGAVQQLTDTFLDETPSLAPNGTMVIYSSTQG--MGSVLQLVS 414

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 415 TDGRFKARLPATDGQVKFPAWSPYL 439


>gi|309780840|ref|ZP_07675581.1| Tol-Pal system beta propeller repeat protein TolB [Ralstonia sp.
           5_7_47FAA]
 gi|308920522|gb|EFP66178.1| Tol-Pal system beta propeller repeat protein TolB [Ralstonia sp.
           5_7_47FAA]
          Length = 434

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 114/419 (27%), Positives = 191/419 (45%), Gaps = 18/419 (4%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
            HA + V  +    S   IA   F    +    +S +V  DL RS  F+ +        +
Sbjct: 29  AHAQLNVEISGVGASQYPIAIANFQGEAQAPQNLSAIVRADLARSGRFSNVDVAGA---V 85

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
                 P    W + GA   V G V + G DR  + FRL+D    + + G      P   
Sbjct: 86  VPESPAPDLGAWKTKGAAAFVGGTVTRNG-DRYEIRFRLYDTAKGESLGGLSLTRGPGQL 144

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R  AH I+D IYQ + GE+G F +R+ +VS+       +  L + D DGAN +    S +
Sbjct: 145 RLAAHEIADYIYQKLIGERGVFATRLSYVSKVG----RRFQLQISDSDGANPQIALTSNE 200

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I+  P +SP+  KVAY +++ +  + VY+ D    R    I N +    AP +S +G+ 
Sbjct: 201 PII-SPSWSPDGTKVAYVSFESKKPV-VYVHDLVAGR-RTVISNQKGNNSAPAWSPDGRH 257

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +S+ +D    +Y V+   +   RL+ +  I+   S+SPD   I F SDR G  Q+Y M
Sbjct: 258 VAVSLSRDGNTQVYLVNADGSGLRRLSRSSAIDTEPSFSPDGRYIYFTSDRGGAPQIYRM 317

Query: 332 QSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             +G      +R++     +   P  SP G L+A+    G  F +            L +
Sbjct: 318 SVDGEEAGAAQRVTFKGNYN-TSPRVSPDGKLLAYISRVGGAFRLYTQDLSNGDVNALTD 376

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVGFM 446
            SN ++P+++ +G+ ++++ +  G   S L ++  +GR   +++       +P W  FM
Sbjct: 377 TSNDESPSFAANGKFILYATRVGGK--SVLAAVSTDGRTRQVLSLQAGEVREPAWGPFM 433


>gi|120612059|ref|YP_971737.1| translocation protein TolB [Acidovorax citrulli AAC00-1]
 gi|120590523|gb|ABM33963.1| TolB, N-terminal domain protein [Acidovorax citrulli AAC00-1]
          Length = 438

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 109/426 (25%), Positives = 196/426 (46%), Gaps = 14/426 (3%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFN 80
           +V +         A  +V       + +  A   F        K+S +V  DL+RS  F 
Sbjct: 23  IVALASAASFPAFAQFRVEITGVGLTQLPTAIAPFRGEAGAPQKISAIVQADLERSGQFR 82

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
            +          + +S P    W   GA  L TG + +    R  V FRLW+    +   
Sbjct: 83  AVDASG---PQLDENSRPDVALWKQKGADSLTTGSITRLPDGRYDVRFRLWETVRGEDKG 139

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G+ F  + A  R +AH I+D +Y+ +TG++G F++RI +V+++      + SL V D DG
Sbjct: 140 GQSFVVTQADLRLVAHRIADYVYEKLTGQRGIFSTRIAYVTKAGS----RYSLWVADADG 195

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N +    S + I+  P +SP+  ++AY +++    + VY+ D    R  + I NFR   
Sbjct: 196 ENAQSALSSPEPII-SPAWSPSGTQLAYVSFESRKPV-VYVHDVSTGR-RRLIANFRGSN 252

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            AP +S +G+   +++ +D +  +Y++D       RL  +  I+   +YS D   I F S
Sbjct: 253 SAPAWSPDGRTLAVTLSRDGSSQLYTIDANGGEPRRLMQSSGIDTEPTYSSDGRSIYFVS 312

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           DR G  Q+Y + + G   +R++     +   P  SP G  +A+    G  F + VM    
Sbjct: 313 DRGGAPQIYRVPATGGSAERVTFTGTYN-ISPSISPDGKWLAYISRVGGAFKLHVMDLTS 371

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASD 439
                + + +  ++P+++P+GR ++++ ++ G     L +  L+G+    L        +
Sbjct: 372 GSVTAITDTTADESPSFAPNGRLIVYATQQQGR--EALMTTTLDGKIKARLAGQNGDIRE 429

Query: 440 PQWVGF 445
           P W  F
Sbjct: 430 PDWGPF 435



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 48/140 (34%), Gaps = 8/140 (5%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I FVS+   +      +  +   G +   +T +       P  SP+ + +AY +     
Sbjct: 307 SIYFVSDRGGAP----QIYRVPATGGSAERVTFTG-TYNISPSISPDGKWLAYIS-RVGG 360

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             ++++MD              +   +P F+ NG+  + + Q+     + +  L      
Sbjct: 361 AFKLHVMDLTSGSVTAI--TDTTADESPSFAPNGRLIVYATQQQGREALMTTTLDGKIKA 418

Query: 296 RLTNTLFINISASYSPDSSQ 315
           RL           + P   Q
Sbjct: 419 RLAGQNGDIREPDWGPFQKQ 438


>gi|227114917|ref|ZP_03828573.1| translocation protein TolB [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 430

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 101/439 (23%), Positives = 195/439 (44%), Gaps = 18/439 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +K+ L  L+      +   +HA V++       +  P+ +   K+         V  +V 
Sbjct: 5   LKVALSFLM-----LWTAVVHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDVGGIVG 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN I  +   Q+      +     W +LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPIDANRMPQQPATASEV-TPAAWTALGIDAVVVGQVQPSADGSYLVSYQL 118

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +   +F  +    R  AHT SD++++ ++G KG F +RI +V ++   G 
Sbjct: 119 VDTSGNPGNVLAQNQFKVTKQWLRYAAHTASDEVFEKLSGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +S +  K+AY T++        ++ T  + 
Sbjct: 178 FPYELRVADYDGYN-QFVVHRSPQPLMSPAWSADGSKLAYVTFESGR--SALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N   +
Sbjct: 235 AIRQVASFPRHNGAPSFSPDGSKLAFALSKSGSLNLYVMNLGSGQISQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + + SD+ G+ Q+Y + +NG   +R++ +   +  D   S  G  +     +G
Sbjct: 295 WFPDSQTLAYTSDQAGRPQVYKVNANGGAPQRLTWEGSQNQ-DSDVSADGKFLVTVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               I  +       ++L +    + P+ +P+G  +I+S K+    GS L  +  +GR +
Sbjct: 354 GAQHISKLDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSKQG--LGSVLQLVSTDGRFK 411

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 412 ARLPATDGQVKFPAWSPYL 430


>gi|260597139|ref|YP_003209710.1| translocation protein TolB [Cronobacter turicensis z3032]
 gi|260216316|emb|CBA29301.1| Protein tolB [Cronobacter turicensis z3032]
          Length = 430

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 97/441 (21%), Positives = 195/441 (44%), Gaps = 16/441 (3%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEV 68
           +   + +    ++    +   +HA V++       +  P+ +   K+         +  +
Sbjct: 1   MKQALRVAFSFLM---LWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGI 57

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V+ DL+ S  FN + +    Q+ ++   + +   W++LG   +V G+V   G     V +
Sbjct: 58  VAADLRNSGKFNPLDRSRLPQQPSSAQEV-QPAAWSALGIDAVVVGQVTPNGDGSYTVAY 116

Query: 129 RLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   
Sbjct: 117 QLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-G 175

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     L V D DG N +++     Q L  P +SP+  KVAY T++        ++ T  
Sbjct: 176 GQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTFESGR--SALVIQTLS 232

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           + A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+    N  
Sbjct: 233 NGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTE 292

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++ PDS  + + SD+ G+ Q+Y +  NG   +R++ +   +  D   S  G  +     
Sbjct: 293 PTWYPDSQTLAYTSDQAGRPQVYKVNINGGAPQRVTWEGSQNQ-DADVSSDGKFMVMVSS 351

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +G    I  +       + L      + P+ +P+G  +I+S  +    GS L  +  +GR
Sbjct: 352 NGGAQNIAKLDLVTGGVQTLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGR 409

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L  T      P W  ++
Sbjct: 410 FKARLPATDGQVKFPAWSPYL 430


>gi|58581291|ref|YP_200307.1| translocation protein TolB [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58425885|gb|AAW74922.1| TolB protein [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 461

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 120/443 (27%), Positives = 217/443 (48%), Gaps = 16/443 (3%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAF-----VKVATNSANYSPVSIAFTKFVSIDELGG-KV 65
           +MK  L  L  L     P S  A      + +   SA+ +P+++    +          V
Sbjct: 22  SMKKPLRWLAALTVLLLPLSALAQQQGLTIDIVGGSASATPIAVIPMPYQGSGTAPQTDV 81

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
           S VV  DL RS  F  +      +K T    + +FQ W +L    +V GRV+  G+   R
Sbjct: 82  SAVVGADLDRSGQFRTLPAAQIVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMDAGEGAYR 140

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           VE+ L+DV   ++++G    +   + R ++H ++D IY+ ITG +G F +RI +V+ S  
Sbjct: 141 VEYELFDVAKGERMLGLAMTARANAMRDVSHQMADAIYEKITGVRGAFWTRIAYVTASGK 200

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G ++ +L V D DG N + +  S +  L  P +SP+ +K+AY +++  +   +YL D  
Sbjct: 201 GGAMRYALMVADSDGYNPQTIVRSAEP-LLSPNWSPDGKKLAYVSFERGNS-SIYLQDIA 258

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              A + + +FR +  AP FS +G+R  +++ +    +IY +DL S    +LTN   I+ 
Sbjct: 259 TG-ARELVSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGIDT 317

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             +++PD   I F SDR G+ Q+Y + ++G    R++     +    V S  G  IA  +
Sbjct: 318 EPTWAPDGGSIYFTSDRGGRPQIYQVAASGGSANRVTFQGNYNATASV-SFDGKKIAVAQ 376

Query: 366 FSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            SG  + I +M +         L   S  ++P+++P+   ++++ ++ G     LY++  
Sbjct: 377 GSGNTYRIAMMDRSLGSPSWSTLSPGSLDESPSFAPNASMVLYAAREGGRG--VLYAVSS 434

Query: 424 NGR-NETLINTPAYASDPQWVGF 445
           + R  + L+       +P W  +
Sbjct: 435 DARVRQRLVLADGDVREPAWGPY 457


>gi|83746171|ref|ZP_00943225.1| TolB protein [Ralstonia solanacearum UW551]
 gi|83727137|gb|EAP74261.1| TolB protein [Ralstonia solanacearum UW551]
          Length = 434

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 114/419 (27%), Positives = 189/419 (45%), Gaps = 18/419 (4%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
            HA + V  +    S   IA   F    +    ++ +V  DL RS  F+ +        +
Sbjct: 29  AHAQLNVEISGVGSSQYPIAVAHFQDEAQAPENITAIVRSDLARSGRFSNVDVAGA---V 85

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
                 P    W + GA  LV G V + G DR  + FRL+D    + + G          
Sbjct: 86  VPESPAPDLGAWKTRGAAALVGGTVTRSG-DRYEIRFRLYDTAKGESLGGLSLTRGEGQL 144

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R  AH I+D IYQ + GE+G F +R+ +VS+          L + D DGAN +    S +
Sbjct: 145 RLAAHEIADFIYQKLMGERGVFATRLSYVSKVG----RHYQLQISDSDGANPQIALTSNE 200

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I+  P +SP+  KVAY +++    + VY+ D    R    + N +    AP +S +G+R
Sbjct: 201 PII-SPSWSPDGTKVAYVSFESRKPV-VYVHDLLTGR-RAVVSNQKGNNSAPAWSPDGRR 257

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +++ +D    IY V+   +   RLT +  I+   S+SPD   I F SDR G  Q+Y M
Sbjct: 258 VAVALSRDGNTQIYLVNADGSGLRRLTRSSAIDTEPSFSPDGRSIYFTSDRGGAPQVYRM 317

Query: 332 QSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
              G      +R++     +   P  SP G L+A+    G  F + V          L +
Sbjct: 318 PVEGEDAGGAQRVTFKGGYN-TSPRISPDGKLLAYIARVGGAFKLYVQDLSNGDVTGLTD 376

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVGFM 446
            S  ++P+++ +G+ ++++ +  G   S L ++  +GR   +++       +P W  FM
Sbjct: 377 TSYDESPSFAANGKFILYATRVGGR--SVLAAVSTDGRTRQILSLQAGQVREPAWGPFM 433


>gi|312962753|ref|ZP_07777241.1| TolB [Pseudomonas fluorescens WH6]
 gi|311282970|gb|EFQ61563.1| TolB [Pseudomonas fluorescens WH6]
          Length = 426

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 203/434 (46%), Gaps = 12/434 (2%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
            L+++        +    + V + S   +P+++    +     L   ++++VS DL+ S 
Sbjct: 1   MLVVICCMAGIAAADEKNILVTSGSDRATPIAVVPFGWQGGSVLPDDMAQIVSDDLRNSG 60

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            +  I + +   +      +  F+DW ++GAQ L+ G +   G  RL++ + L++V   +
Sbjct: 61  YYAPIPKGNMISQPNQASEVV-FRDWKAVGAQYLMVGNITPAG-GRLQITYTLFNVATEQ 118

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GIIKNSLCVM 196
           Q++      +    R +AH ISD  ++ +TG KG F++R+L+V+    S    + +L   
Sbjct: 119 QVLTGSVSGTAEQLRDMAHYISDQSFEKLTGIKGAFSTRLLYVTAERFSVDNTRYTLQRS 178

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R  ++I NF
Sbjct: 179 DYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR-REQITNF 235

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             +  AP +S +G R    + KD   DIY +++ S    R+T+   IN    +  D S I
Sbjct: 236 EGLNGAPAWSPDGSRLAFVLSKDGNPDIYVMNMASRQITRVTSGPGINTEPFWGKDGSTI 295

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIG 374
            F SDR GK Q+Y     G   +R++     +  +P  S     +           F + 
Sbjct: 296 YFTSDRGGKPQIYKTSVGGGGAERVTFIGNYNA-NPKLSADEKTLVMIHRQDGFTNFRVA 354

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                    ++L + +  ++ T +P+G  +I++ ++ G     L  + +NGR    + T 
Sbjct: 355 AQDLQRGTVKILTDTNLDESATVAPNGTMVIYATRQQGRG--VLMLVSINGRVRLPLPTA 412

Query: 435 -AYASDPQWVGFMD 447
                +P W  +++
Sbjct: 413 QGEVREPSWSPYLN 426


>gi|253687643|ref|YP_003016833.1| Tol-Pal system beta propeller repeat protein TolB [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|259533860|sp|C6DCE7|TOLB_PECCP RecName: Full=Protein tolB; Flags: Precursor
 gi|251754221|gb|ACT12297.1| Tol-Pal system beta propeller repeat protein TolB [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 430

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 99/432 (22%), Positives = 191/432 (44%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           + V     +   +HA V++       +  P+ +   K+         V  +V  DL+ S 
Sbjct: 7   VAVSFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDVGGIVGADLRNSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-- 135
            FN I  +   Q+      +     W +LG   +V G+V         V ++L D     
Sbjct: 67  KFNPIDANRMPQQPATASEV-TPAAWTALGIDAVVVGQVQPSADGSYLVSYQLVDTSGNP 125

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              +   +F  +    R  AHT SD++++ ++G KG F +RI +V ++   G     L V
Sbjct: 126 GNVLAQNQFKVTKQWLRYAAHTASDEVFEKLSGIKGAFRTRIAYVVQTN-GGQFPYELRV 184

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N +++     Q L  P +S +  K+AY T++        ++ T  + A +++ +
Sbjct: 185 ADYDGYN-QFVVHRSPQPLMSPAWSADGSKLAYVTFESGR--SALVIQTLANGAIRQVAS 241

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N   ++ PDS  
Sbjct: 242 FPRHNGAPSFSPDGSKLAFALSKSGSLNLYVMNLASGQISQVTDGRSNNTEPTWFPDSQT 301

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + + SD+ G+ Q+Y + +NG   +R++ +   +  D   S  G  +     +G    I  
Sbjct: 302 LAYTSDQAGRPQVYKVNANGGAPQRLTWEGAQNQ-DADVSADGKFLVTVGSNGGAQHISK 360

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTP 434
           +       ++L +    + P+ +P+G  +I+S K+    GS L  +  +GR +  L  T 
Sbjct: 361 LDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSKQG--LGSVLQLVSTDGRFKARLPATD 418

Query: 435 AYASDPQWVGFM 446
                P W  ++
Sbjct: 419 GQVKFPAWSPYL 430


>gi|163751257|ref|ZP_02158485.1| tolB protein [Shewanella benthica KT99]
 gi|161328971|gb|EDQ00045.1| tolB protein [Shewanella benthica KT99]
          Length = 442

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 108/447 (24%), Positives = 203/447 (45%), Gaps = 23/447 (5%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSAN--YSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
            L   L L      + + A + +          P+++    +        ++S+VV  DL
Sbjct: 3   TLGKWLFLSLIIVSSPVRAALDIIITEGVDAARPIAVIPFVWQGAGAAPEQISDVVMSDL 62

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  F  + +    Q+  +  S    +DW+S+GA+ +V G +   G D+  V F L D+
Sbjct: 63  IRSGAFKPLDELGLPQRNISSVSQFVAKDWSSIGAEAVVMGSIKPYGNDQYLVTFDLVDL 122

Query: 134 KDRKQ-------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
              +              I  ++   S A +R+  H ISD +Y+ +TG +G F +R+ +V
Sbjct: 123 VKAQMQQGAGPQSNSEYLIDSRETVISAAQFRQYGHRISDLVYEELTGIRGAFLTRLAYV 182

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                       L + D DG N + L  S +  L  P +SP+ +K+AY +++++    ++
Sbjct: 183 VVKHGE-KSPYQLMISDYDGYNEQMLLRSSEP-LMSPSWSPDGRKLAYVSFENKKA-EIF 239

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D       K + +F  +  AP FS +GK+  +++ KD   +IY +D+ + A +R+TN 
Sbjct: 240 IQDIYTQSRNK-VSSFNGINGAPVFSPDGKKLALTLSKDGQPEIYVIDIATKALKRVTNH 298

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+  AS+ PD   ++F S+R G+ Q+Y +       +R++ + E +      +P G  
Sbjct: 299 YAIDTEASWFPDGKSLIFTSERGGRPQIYKVTLASGKVQRLTFEGEWNLGG-SIAPDGRS 357

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + F   +  KF I  M  +    ++L      ++P+ +P+G  +I+     G     L +
Sbjct: 358 MIFVNRTNGKFNIARMDLETRFMQILTSTRLDESPSVAPNGTMVIYGTTHQGKQ--VLGA 415

Query: 421 IDLNGRNE-TLINTPAYASDPQWVGFM 446
           +  +GR +  L         P W  F+
Sbjct: 416 VSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|291281683|ref|YP_003498501.1| Protein tolB precursor [Escherichia coli O55:H7 str. CB9615]
 gi|290761556|gb|ADD55517.1| Protein tolB precursor [Escherichia coli O55:H7 str. CB9615]
          Length = 431

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 100/446 (22%), Positives = 197/446 (44%), Gaps = 20/446 (4%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGG 63
            + + L +     +L       + + +HA V++  +S      P+ +   ++        
Sbjct: 1   MMKQALRVAFGFLIL-------WASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPE 53

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
            +  +V+ DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V       
Sbjct: 54  DIGGIVAADLRNSGKFNPLDRAHLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGS 112

Query: 124 LRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             V ++L D        +    +  +    R   HT SD++++ +TG KG F +RI +V 
Sbjct: 113 YNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVV 172

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++   G     L V D DG N +++     Q L  P +SP+  K+AY T++        +
Sbjct: 173 QTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALV 228

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           + T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+  
Sbjct: 229 IQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR 288

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             N   ++ PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +
Sbjct: 289 SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFM 347

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                +G +  I          ++L      + P+ +P+G  +I+S  +    GS L  +
Sbjct: 348 VMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLV 405

Query: 422 DLNGRNE-TLINTPAYASDPQWVGFM 446
             +GR +  L  T      P W  ++
Sbjct: 406 STDGRFKARLPATDGQVKFPAWSPYL 431


>gi|323972027|gb|EGB67247.1| tol-Pal system beta propeller TolB [Escherichia coli TA007]
          Length = 431

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 100/446 (22%), Positives = 197/446 (44%), Gaps = 20/446 (4%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGG 63
            + + L +     +L       + + +HA V++  +S      P+ +   ++        
Sbjct: 1   MMKQALRVAFGFLIL-------WASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPE 53

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
            +  +V+ DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V       
Sbjct: 54  DIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGS 112

Query: 124 LRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             V ++L D        +    +  +    R   HT SD++++ +TG KG F +RI +V 
Sbjct: 113 YNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVV 172

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++   G     L V D DG N +++     Q L  P +SP+  K+AY T++        +
Sbjct: 173 QTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALV 228

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           + T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+  
Sbjct: 229 IQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR 288

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             N   ++ PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +
Sbjct: 289 SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFM 347

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                +G +  I          ++L      + P+ +P+G  +I+S  +    GS L  +
Sbjct: 348 VMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLV 405

Query: 422 DLNGRNE-TLINTPAYASDPQWVGFM 446
             +GR +  L  T      P W  ++
Sbjct: 406 STDGRFKARLPATDGQVKSPAWSPYL 431


>gi|26246709|ref|NP_752749.1| translocation protein TolB [Escherichia coli CFT073]
 gi|91209774|ref|YP_539760.1| translocation protein TolB [Escherichia coli UTI89]
 gi|117622931|ref|YP_851844.1| translocation protein TolB [Escherichia coli APEC O1]
 gi|170683440|ref|YP_001742851.1| translocation protein TolB [Escherichia coli SMS-3-5]
 gi|209917991|ref|YP_002292075.1| translocation protein TolB [Escherichia coli SE11]
 gi|227884293|ref|ZP_04002098.1| TolB protein [Escherichia coli 83972]
 gi|237707297|ref|ZP_04537778.1| translocation protein TolB [Escherichia sp. 3_2_53FAA]
 gi|261224451|ref|ZP_05938732.1| translocation protein TolB [Escherichia coli O157:H7 str. FRIK2000]
 gi|261254557|ref|ZP_05947090.1| translocation protein TolB [Escherichia coli O157:H7 str. FRIK966]
 gi|300816390|ref|ZP_07096612.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 107-1]
 gi|300822971|ref|ZP_07103106.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 119-7]
 gi|300900747|ref|ZP_07118896.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 198-1]
 gi|300906999|ref|ZP_07124668.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 84-1]
 gi|300918401|ref|ZP_07135001.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 115-1]
 gi|300926144|ref|ZP_07141957.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 182-1]
 gi|300929454|ref|ZP_07144922.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 187-1]
 gi|300937787|ref|ZP_07152584.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 21-1]
 gi|300947179|ref|ZP_07161389.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 116-1]
 gi|300957689|ref|ZP_07169878.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 175-1]
 gi|300992345|ref|ZP_07179868.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 200-1]
 gi|300993166|ref|ZP_07180249.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 45-1]
 gi|301020788|ref|ZP_07184852.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 69-1]
 gi|301027078|ref|ZP_07190450.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 196-1]
 gi|301051340|ref|ZP_07198163.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 185-1]
 gi|301305228|ref|ZP_07211326.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 124-1]
 gi|301327933|ref|ZP_07221104.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 78-1]
 gi|301648045|ref|ZP_07247812.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 146-1]
 gi|309797455|ref|ZP_07691847.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 145-7]
 gi|331656759|ref|ZP_08357721.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA206]
 gi|332282411|ref|ZP_08394824.1| translocation protein TolB [Shigella sp. D9]
 gi|26107108|gb|AAN79292.1|AE016757_196 TolB protein precursor [Escherichia coli CFT073]
 gi|148020|gb|AAA24684.1| tolB [Escherichia coli]
 gi|91071348|gb|ABE06229.1| periplasmic protein involved in the tonB-independent uptake of
           group A colicins [Escherichia coli UTI89]
 gi|115512055|gb|ABJ00130.1| TolB protein precursor [Escherichia coli APEC O1]
 gi|170521158|gb|ACB19336.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           SMS-3-5]
 gi|209911250|dbj|BAG76324.1| TolB protein [Escherichia coli SE11]
 gi|226898507|gb|EEH84766.1| translocation protein TolB [Escherichia sp. 3_2_53FAA]
 gi|227839045|gb|EEJ49511.1| TolB protein [Escherichia coli 83972]
 gi|299879412|gb|EFI87623.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 196-1]
 gi|300297002|gb|EFJ53387.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 185-1]
 gi|300305362|gb|EFJ59882.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 200-1]
 gi|300315607|gb|EFJ65391.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 175-1]
 gi|300355806|gb|EFJ71676.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 198-1]
 gi|300398434|gb|EFJ81972.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 69-1]
 gi|300401220|gb|EFJ84758.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 84-1]
 gi|300406696|gb|EFJ90234.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 45-1]
 gi|300414464|gb|EFJ97774.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 115-1]
 gi|300417843|gb|EFK01154.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 182-1]
 gi|300453165|gb|EFK16785.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 116-1]
 gi|300457198|gb|EFK20691.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 21-1]
 gi|300462563|gb|EFK26056.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 187-1]
 gi|300524512|gb|EFK45581.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 119-7]
 gi|300531080|gb|EFK52142.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 107-1]
 gi|300839540|gb|EFK67300.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 124-1]
 gi|300845576|gb|EFK73336.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 78-1]
 gi|301073871|gb|EFK88677.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 146-1]
 gi|308118979|gb|EFO56241.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 145-7]
 gi|315257659|gb|EFU37627.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 85-1]
 gi|315287145|gb|EFU46557.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 110-3]
 gi|315292654|gb|EFU52006.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 153-1]
 gi|315299257|gb|EFU58509.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 16-3]
 gi|323938279|gb|EGB34537.1| tol-Pal system beta propeller protein TolB [Escherichia coli E1520]
 gi|323946994|gb|EGB43008.1| tol-Pal system beta propeller protein TolB [Escherichia coli H120]
 gi|323963121|gb|EGB58691.1| tol-Pal system beta propeller TolB [Escherichia coli H489]
 gi|324009566|gb|EGB78785.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 57-2]
 gi|324010463|gb|EGB79682.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 60-1]
 gi|324020352|gb|EGB89571.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           MS 117-3]
 gi|331055007|gb|EGI27016.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA206]
 gi|332104763|gb|EGJ08109.1| translocation protein TolB [Shigella sp. D9]
          Length = 431

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 100/446 (22%), Positives = 197/446 (44%), Gaps = 20/446 (4%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGG 63
            + + L +     +L       + + +HA V++  +S      P+ +   ++        
Sbjct: 1   MMKQALRVAFGFLIL-------WASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPE 53

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
            +  +V+ DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V       
Sbjct: 54  DIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGS 112

Query: 124 LRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             V ++L D        +    +  +    R   HT SD++++ +TG KG F +RI +V 
Sbjct: 113 YNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVV 172

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++   G     L V D DG N +++     Q L  P +SP+  K+AY T++        +
Sbjct: 173 QTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALV 228

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           + T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+  
Sbjct: 229 IQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGR 288

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             N   ++ PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +
Sbjct: 289 SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFM 347

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                +G +  I          ++L      + P+ +P+G  +I+S  +    GS L  +
Sbjct: 348 VMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLV 405

Query: 422 DLNGRNE-TLINTPAYASDPQWVGFM 446
             +GR +  L  T      P W  ++
Sbjct: 406 STDGRFKARLPATDGQVKFPAWSPYL 431


>gi|207728189|ref|YP_002256583.1| protein tolb precursor [Ralstonia solanacearum MolK2]
 gi|207744076|ref|YP_002260468.1| protein tolb precursor [Ralstonia solanacearum IPO1609]
 gi|206591434|emb|CAQ57046.1| protein tolb precursor [Ralstonia solanacearum MolK2]
 gi|206595480|emb|CAQ62407.1| protein tolb precursor [Ralstonia solanacearum IPO1609]
          Length = 432

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 114/419 (27%), Positives = 189/419 (45%), Gaps = 18/419 (4%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
            HA + V  +    S   IA   F    +    ++ +V  DL RS  F+ +        +
Sbjct: 27  AHAQLNVEISGVGSSQYPIAVAHFQDEAQAPENITAIVRSDLARSGRFSNVDVAGA---V 83

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
                 P    W + GA  LV G V + G DR  + FRL+D    + + G          
Sbjct: 84  VPESPAPDLGAWKTRGAAALVGGTVTRSG-DRYEIRFRLYDTAKGESLGGLSLTRGEGQL 142

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R  AH I+D IYQ + GE+G F +R+ +VS+          L + D DGAN +    S +
Sbjct: 143 RLAAHEIADFIYQKLMGERGVFATRLSYVSKVG----RHYQLQISDSDGANPQIALTSNE 198

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I+  P +SP+  KVAY +++    + VY+ D    R    + N +    AP +S +G+R
Sbjct: 199 PII-SPSWSPDGTKVAYVSFESRKPV-VYVHDLLTGR-RAVVSNQKGNNSAPAWSPDGRR 255

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +++ +D    IY V+   +   RLT +  I+   S+SPD   I F SDR G  Q+Y M
Sbjct: 256 VAVALSRDGNTQIYLVNADGSGLRRLTRSSAIDTEPSFSPDGRSIYFTSDRGGAPQVYRM 315

Query: 332 QSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
              G      +R++     +   P  SP G L+A+    G  F + V          L +
Sbjct: 316 PVEGEDAGGAQRVTFKGGYN-TSPRISPDGKLLAYIARVGGAFKLYVQDLSNGDVTGLTD 374

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVGFM 446
            S  ++P+++ +G+ ++++ +  G   S L ++  +GR   +++       +P W  FM
Sbjct: 375 TSYDESPSFAANGKFILYATRVGGR--SVLAAVSTDGRTRQILSLQAGQVREPAWGPFM 431


>gi|170723154|ref|YP_001750842.1| translocation protein TolB [Pseudomonas putida W619]
 gi|169761157|gb|ACA74473.1| Tol-Pal system beta propeller repeat protein TolB [Pseudomonas
           putida W619]
          Length = 423

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 103/431 (23%), Positives = 204/431 (47%), Gaps = 12/431 (2%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFN 80
           ++        +    + V + S   +P+++          L   +++++  DL+ S  ++
Sbjct: 1   MLCCVAGMAMAEEKNILVTSGSDRATPIAVVPFGLQGGSVLPEDMADIIGNDLRNSGYYS 60

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
            I + +   + T    +  F+DW +LGAQ ++ G ++  G  RL+V++ L++V   +Q++
Sbjct: 61  PIPRQNMISQPTQASEVI-FRDWKALGAQYVMVGSIVPSG-GRLQVQYALFNVATEQQVL 118

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRD 199
                 S    R ++H I+D  ++ +TG KG F++R+L+V+     +   + +L   D D
Sbjct: 119 TGSVAGSVDQLRDMSHYIADQSFEKLTGIKGAFSTRMLYVTAERFSTNNTRYTLQRSDYD 178

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           GA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R  +++ NF  +
Sbjct: 179 GARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFIQHIDTGR-REQVTNFEGL 235

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP +S +G R    + KD   DIY +++ S    R+T    IN    +  D + + F 
Sbjct: 236 NGAPAWSPDGSRLAFVLSKDGNPDIYVMNVASRQISRVTAGPGINTEPFWGKDGNTLYFT 295

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMK 377
           SDR GK Q+Y    +G   +R++     +  +P  S     +           F +    
Sbjct: 296 SDRGGKPQIYKQSVSGGSAERVTFVGNYNA-NPKLSADEKTLVMIHRQQGFTNFKVAAQD 354

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AY 436
                 ++L E S  ++PT +P+G  LI++ ++ G     L  + LNGR    + T    
Sbjct: 355 LQRGSVKILSETSLDESPTVAPNGTMLIYATRQQGRG--VLMLVSLNGRVRLPLPTAQGE 412

Query: 437 ASDPQWVGFMD 447
             +P W  +++
Sbjct: 413 VREPSWSPYLN 423


>gi|261278785|pdb|3IAX|A Chain A, The Crystal Structure Of The Tolb Box Of Colicin A In
           Complex With Tolb Reveals Important Differences In The
           Recruitment Of The Common Tolb Translocation Portal Used
           By Group A Colicins
          Length = 438

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 99/439 (22%), Positives = 196/439 (44%), Gaps = 18/439 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVS 70
           +++    L+      + + +HA V++  +S      P+ +   ++         +  +V+
Sbjct: 5   LRVAFGFLI-----LWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVA 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPLDRARLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQL 118

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 119 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 178 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 235 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 295 WFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 354 GQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 411

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 412 ARLPATDGQVKFPAWSPYL 430


>gi|237809442|ref|YP_002893882.1| translocation protein TolB [Tolumonas auensis DSM 9187]
 gi|237501703|gb|ACQ94296.1| Tol-Pal system beta propeller repeat protein TolB [Tolumonas
           auensis DSM 9187]
          Length = 431

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 115/436 (26%), Positives = 200/436 (45%), Gaps = 15/436 (3%)

Query: 19  LLLVLIGGF-FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           LL+ L+G   F  S  A + +       S   +A   F S   L   ++ V+S DL RS 
Sbjct: 4   LLMALVGWLWFSQSAMAELDILVTGGMDSGRPVAIVPFKSDGSLPEDLANVISSDLMRSG 63

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F  +S++S  ++      I  +  W++LG + +V G V   G  + RV F L DV   K
Sbjct: 64  KFTPLSRNSMPEQPAQSGQI-NYPTWSALGTEAVVVGHVESAGAGQYRVTFELVDVARGK 122

Query: 138 -----QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                 +  +    +    RK AH ISD +Y+ +TGE+G F + IL+V+    S  +   
Sbjct: 123 DGGNAVLDSRVATVTAKQLRKYAHRISDIVYEKLTGERGAFLTSILYVTVDR-SQAMPYR 181

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L + D DG N R L  SR+ I   P +SP+ +++AY +++ +    +++ D         
Sbjct: 182 LMLADYDGYNERMLLRSREPI-MSPTWSPDGRRIAYVSFE-KRTPAIFIQDLYSQARSML 239

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +     +  AP +S +G+   + + KD   DIY+VD+ S    RLT+   I+   S+S D
Sbjct: 240 VA-LPGINGAPSWSPDGRSMAVVLSKDGQPDIYTVDIGSRRLNRLTSDQAIDTEPSWSAD 298

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              + F S+R G+ Q+Y +        R++ + +++      +P G  +         + 
Sbjct: 299 GRSVFFTSERGGRPQIYKVDVASHSASRVTWEGDSNLGASA-TPDGKALVMVSRVQGSYR 357

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLI 431
           I     +G    +L   S  ++P+ +P+G  +I+S    G  G  L  +  +GR +  L 
Sbjct: 358 IARQDLNGGGVYVLTSSSLDESPSVAPNGSMIIYSTVYQGRQGLAL--VSADGRFKANLP 415

Query: 432 NTPAYASDPQWVGFMD 447
           +       P W  F++
Sbjct: 416 SAKGEVRSPAWSPFLN 431


>gi|114330316|ref|YP_746538.1| translocation protein TolB [Nitrosomonas eutropha C91]
 gi|114307330|gb|ABI58573.1| TolB, N-terminal domain protein [Nitrosomonas eutropha C91]
          Length = 423

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 107/434 (24%), Positives = 196/434 (45%), Gaps = 14/434 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M+  L    V +  +  T + A + +       + + IA   F     L   +S +VS D
Sbjct: 1   MRNFLYCTGVFLLLWMNTPLQAALDIEIFGGGANRMPIAVAPFNGEKGLPQDISAIVSAD 60

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+RS +F L+       +         + DW   GA  LV G        R+ ++FRL D
Sbjct: 61  LERSGIFKLVDPLGLTSQ-----EPVSYVDWLGRGASALVIGSTSMLPDGRVDIQFRLLD 115

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V  + Q+ G     +    R  AH I+D +Y+++T E G F++RI FV +       + +
Sbjct: 116 VAKQVQLTGFSGTVTIEQLRAFAHRIADIVYEALTNEPGVFSTRIAFVRKQGS----RYA 171

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V D DG N R L    + I+  P +SP+  K+AY +++ +    V  +     R  K 
Sbjct: 172 LQVSDYDGFNARSLIEYTEPII-SPAWSPDGSKIAYTSFEKKKP--VVYVQALATRERKV 228

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + NF+    AP +S +G +  + +       IY ++   +  +R++ +  I+   S+SPD
Sbjct: 229 VANFKGSNSAPAWSPDGGKLAVVLTLHGGSQIYLINADGSGLQRISQSPGIDTEPSFSPD 288

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              ++F SDR G  Q+Y M  +G   +R++ + + +   P +S  G    +   +  +F+
Sbjct: 289 GKWLIFTSDRGGSPQIYRMPVSGGAAERLTFEGDYNV-SPRYSSDGKRFVYIHRNSGRFS 347

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + V      Q +LL + S  ++P++SP+ R ++++ +  G     + S D   R+     
Sbjct: 348 VAVQDLSTRQMQLLTDSSFDESPSFSPNSRMVLYTTEVSGRGILSIVSSDGQTRS-RFSQ 406

Query: 433 TPAYASDPQWVGFM 446
                 +  W   +
Sbjct: 407 EAGDVREAVWGPLL 420


>gi|170727076|ref|YP_001761102.1| translocation protein TolB [Shewanella woodyi ATCC 51908]
 gi|226705894|sp|B1KIF6|TOLB_SHEWM RecName: Full=Protein tolB; Flags: Precursor
 gi|169812423|gb|ACA87007.1| Tol-Pal system beta propeller repeat protein TolB [Shewanella
           woodyi ATCC 51908]
          Length = 442

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 109/447 (24%), Positives = 200/447 (44%), Gaps = 23/447 (5%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSAN--YSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
            L   L+L          A + +          P+++    +        ++S+VV  DL
Sbjct: 3   TLGKWLLLGLVVMSMPARAALDIVITEGVDAARPIAVIPFVWQGQGPAPQQISDVVMSDL 62

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  FN I +    Q+     S    ++W+++ A+ +V G V   G D+  V F L D+
Sbjct: 63  ARSGTFNPIDELGLPQRNIAKVSQFVAKEWSNVAAEAVVMGSVKPMGPDQFLVNFELVDL 122

Query: 134 KDRKQ-------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
              +              I   +   S   +R+  H ISD +Y+ +TG +G F +RI +V
Sbjct: 123 VKAQMQAGNGPQSSSEYLIDSSEVVISAEQFRQYGHRISDIVYEKLTGIRGAFLTRIAYV 182

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                       L + D DG N + L  S +  L  P +SP+  K+AY +++++    V+
Sbjct: 183 VVKHGE-KSPYHLMISDYDGHNEKMLLRSPEP-LMSPSWSPDGSKLAYVSFENKKA-EVF 239

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + +    +A  +I ++  +  AP FS +GK+  +++ +D   +IY VD+ + A +R+TN 
Sbjct: 240 VQNIYT-QARAKITSYDGINGAPVFSPDGKKLALTLSRDGQPEIYVVDIDTKALKRVTNH 298

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+  AS+ PD   ++F S+R G+ Q+Y +       +R++ + E +      SP G  
Sbjct: 299 YAIDTEASWFPDGKSLIFTSERGGRPQIYKVTLASGKVQRMTFEGEWNLGG-SISPDGRS 357

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + F   +  KF I  M  +    ++L      ++P+ +P+G  +I+     G     L +
Sbjct: 358 MIFVNRTNGKFNIARMDLETRFVQVLTSTRLDESPSVAPNGTMVIYGTTYQGKQ--VLAA 415

Query: 421 IDLNGRNE-TLINTPAYASDPQWVGFM 446
           +  +GR +  L         P W  F+
Sbjct: 416 VSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|259909070|ref|YP_002649426.1| translocation protein TolB [Erwinia pyrifoliae Ep1/96]
 gi|224964692|emb|CAX56209.1| Protein TolB (Translocation of group A colicins) [Erwinia
           pyrifoliae Ep1/96]
          Length = 430

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 195/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +++ +L V          HA V++          P+ +   K+         
Sbjct: 1   MKQAFRVALSVLMLFV-------AVAHAEVRIEITQGVNTARPIGVVPFKWDGPGAAPED 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V+ DL+ S  FN I +    Q+ T+   + +   W +LG   ++ G+V        
Sbjct: 54  IGGIVAADLRNSGKFNPIDRARLPQQPTSVAEV-QPAAWTALGIDAVIVGQVQPGADGSY 112

Query: 125 RVEFRLWDVKDR-KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D       ++ +  F     W R  AHT SD+ ++ +T  KG F +RI +V +
Sbjct: 113 TVSYQLVDTSGNPGAVLAQNQFKVTKQWLRYAAHTASDESFEKLTAIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G     L V D DG N +++     Q L  P +SP+  KVAY T++        ++
Sbjct: 173 TN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTFESGK--SALVI 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+  +
Sbjct: 229 QTLANGAIRQVASFPRHNGAPSFSPDGSKLAFALSKTGSLNLYVMDVGSGQIRQITDGRY 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +   ++ PDS  + + SD+ G+ Q+Y +  NG   +RI+ D   +  D   S  G  + 
Sbjct: 289 NSTEPTWFPDSQSLAYTSDQAGRPQIYKIGVNGGTAQRITWDGAQNQ-DADVSSDGKSMV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +     +          + L +    + P+ +P+G  +I+S  +    GS L  + 
Sbjct: 348 MISTNSGAQHVARQDLVTGAVQQLTDTFLDETPSLAPNGTMVIYSSTQG--MGSVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKFPAWSPYL 430


>gi|323170861|gb|EFZ56511.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           LT-68]
          Length = 430

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 99/439 (22%), Positives = 197/439 (44%), Gaps = 18/439 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVS 70
           +++    L+      + +++HA V++  +S      P+ +   ++         +  +V+
Sbjct: 5   LRVAFGFLI-----LWASALHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVA 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPLDRARLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQL 118

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 119 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 178 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 235 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 295 WFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 354 GQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 411

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 412 ARLPATDGQVKFPAWSPYL 430


>gi|291085672|ref|ZP_06353704.2| Tol-Pal system beta propeller repeat protein TolB [Citrobacter
           youngae ATCC 29220]
 gi|291070094|gb|EFE08203.1| Tol-Pal system beta propeller repeat protein TolB [Citrobacter
           youngae ATCC 29220]
          Length = 431

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 97/439 (22%), Positives = 188/439 (42%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M      +       +   +HA V++       +  P+ +   K+         +  +V 
Sbjct: 1   MMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVG 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+      + +   W++LG   +V G+V         V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPGTAAEV-QPAAWSALGIDAVVVGQVTPNPDGSYSVAYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 120 VDTGGAPGTVLAQNTYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 179 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+    N   +
Sbjct: 236 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     + 
Sbjct: 296 WFPDSQNLAFTSDQAGRPQVYKVNVNGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSAN 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GQQHIAKQDLVAGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQVKFPAWSPYL 431


>gi|326795239|ref|YP_004313059.1| protein tolB [Marinomonas mediterranea MMB-1]
 gi|326546003|gb|ADZ91223.1| Protein tolB [Marinomonas mediterranea MMB-1]
          Length = 432

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 101/436 (23%), Positives = 208/436 (47%), Gaps = 9/436 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVS 70
           MK+   L L+ +      S+ A + +   S     + IA   F     + L   ++++V 
Sbjct: 1   MKLFKPLFLMFVMVITSQSVRAQLVIEITSGADQLLPIAVVPFEYSGANPLPEDIAQIVE 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS VF  I + S   + ++ D++  ++DW  L A+ ++ G V+       +V F L
Sbjct: 61  SDLLRSGVFETIPRASMLSEPSSSDNV-FYRDWRILKAEYILVGAVLNASNGNYQVAFEL 119

Query: 131 WDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            +V  ++++  K+    +P+S+R  AH ISD +YQ++TG KG F++RIL+V+        
Sbjct: 120 LNVNTQQRVGNKEVISVTPSSFRDAAHFISDKVYQALTGIKGAFSTRILYVTAEGDRSAP 179

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L V D DG   + +  S++ I   P +S N + + Y  + D     +++ +    + 
Sbjct: 180 NYKLQVADADGHRAQVIVESKEPI-LSPSWSRNGRFITYVMFRDRRP-NIFIQELATGKR 237

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K +  ++ +  AP +S +GK+  + + KD   ++Y +D+ +   +R+TN   I+   S+
Sbjct: 238 SK-VAQYKGLNGAPAWSPDGKKLALVLSKDNNPEVYVLDIATQKLDRMTNHYAIDTEPSW 296

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PD   I+F SDR G  Q+Y +     + +R++ + +++      +P G  +   +    
Sbjct: 297 EPDGKGIIFTSDRGGNPQIYRLDVKSKEVERVTFEGDSNTRA-RMTPDGRYLVTVQKDSG 355

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I +      +  +L +    ++P+ +P+G  ++++  +       + S+D       
Sbjct: 356 NYHIALQDMKNGRVTILTQTYLDESPSIAPNGSMVMYATTEGNKGILSVVSVDGL-VKYK 414

Query: 430 LINTPAYASDPQWVGF 445
           L ++     +P W  +
Sbjct: 415 LPSSNGDVREPAWSPY 430


>gi|70732083|ref|YP_261839.1| translocation protein TolB [Pseudomonas fluorescens Pf-5]
 gi|119371050|sp|Q4K7E4|TOLB_PSEF5 RecName: Full=Protein tolB; Flags: Precursor
 gi|68346382|gb|AAY93988.1| tolB protein [Pseudomonas fluorescens Pf-5]
          Length = 433

 Score =  382 bits (982), Expect = e-104,   Method: Composition-based stats.
 Identities = 108/441 (24%), Positives = 207/441 (46%), Gaps = 14/441 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M+  L  +LV+I      +      +   S     +P+++    +     L   +++++ 
Sbjct: 1   MRNLLRGMLVVICCMAGIAAADEKNILVTSGSDRATPIAVVPFGWQGGSVLPDDMAQIIG 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G ++  G  RL+V++ L
Sbjct: 61  DDLRNSGYYAPIPKQNMISLPTQASEVI-FRDWKALGAQYVMVGSIVPAG-GRLQVQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +Q++      S    R ++H ISD  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQQVLTGSVSGSVDQLRDMSHYISDQSFEKLTGIKGAFSTRLLYVTAERFSVNNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G R    + KD   DIY +++ S    R+T+   IN    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGTRLAFVLSKDGNPDIYVMNMASRQISRVTSGPGINTEPFW 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D S I F SDR GK Q+Y    NG   +R++     +  +P  S     +        
Sbjct: 296 GKDGSTIYFTSDRGGKPQVYKSNINGGGAERVTFIGNYNA-NPKLSADEKTLVMIHRQDG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F +          ++L + +  ++ T +P+G  +I++ ++ G     L  + +NGR 
Sbjct: 355 FTNFRVAAQDLQRGSVKILTDTNLDESATVAPNGTMVIYATRQQGRG--VLMLVSINGRV 412

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + T      +P W  +++
Sbjct: 413 RLPLPTAQGEVREPSWSPYLN 433


>gi|269967692|ref|ZP_06181742.1| translocation protein TolB precursor [Vibrio alginolyticus 40B]
 gi|269827779|gb|EEZ82063.1| translocation protein TolB precursor [Vibrio alginolyticus 40B]
          Length = 450

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 101/458 (22%), Positives = 194/458 (42%), Gaps = 32/458 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L L + ++        +A +++       +  P+++   K+     L   VS V++
Sbjct: 1   MIRRLLLGMFVLFSSMTNVANAALELVITDGIDSARPIAVVPFKWEGTQALPTDVSAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ +      Q   +   +  F  W +LG   L+TG + +  +    + ++L
Sbjct: 61  SDLQRSGKFSPVPTSKMPQTPFSESEV-NFDAWTNLGVDALLTGSIKQNDQGDYVINYQL 119

Query: 131 WDVKDRKQIIGKK---------------------FFSSPASWRKIAHTISDDIYQSITGE 169
            D+   +   GK                              R+ AH ISD +Y+ +TG+
Sbjct: 120 VDIVRGQLTGGKSKALGSDGELVLSKDHVLFNKVATVQGPRMREYAHRISDLVYEQLTGD 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V  +         L V D DG N R +  S+ Q L  P +SP+ +K+AY 
Sbjct: 180 RGAFMTRIAYVVVN-DKDRFPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGKKLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +++M+       ++I ++     APRFS +G +  I + K  ++ +Y+ DL
Sbjct: 238 SFQNGQA-EIFIMNIYTGE-REKITSYPRHNGAPRFSPDGNKLAIVLSKTGSLHVYTFDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +    ++T     N    + PD   ++F SDR GK Q+Y +        R++     + 
Sbjct: 296 NTRKLTQITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLGSGSIDRLTWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G  +     S   F +     +    ++L +    ++P+ +P+G  +++S  
Sbjct: 356 GGQ-ITPDGRFLVMVNRSNAGFNLAKQDLETGALQVLTKTLLDESPSIAPNGGMVVYSSI 414

Query: 410 KDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +      L  + ++GR +  L  T      P W  F+
Sbjct: 415 YNKKN--VLSMVSIDGRFKARLPATNGRVRAPAWSPFL 450


>gi|331672262|ref|ZP_08373053.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA280]
 gi|331070457|gb|EGI41821.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA280]
          Length = 430

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 99/439 (22%), Positives = 196/439 (44%), Gaps = 18/439 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVS 70
           +++    L+      + + +HA V++  +S      P+ +   ++         +  +V+
Sbjct: 5   LRVAFGFLI-----LWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVA 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPLDRARLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQL 118

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 119 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 178 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 235 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 295 WFPDSQNLAFTSDQAGRPQVYKVNVNGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 354 GQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 411

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 412 ARLPATDGQVKFPAWSPYL 430


>gi|209517620|ref|ZP_03266458.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           H160]
 gi|209501916|gb|EEA01934.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           H160]
          Length = 430

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 200/444 (45%), Gaps = 21/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L ++  +   L+ +GG    + +A + V       +   IA T F +      +VS
Sbjct: 3   LMTKLGLRTLVATCLIAVGG----AANAQLNVLVTGVGSTQFPIATTNFANEANSPQQVS 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V +DLQRS  F  I   S      +         W + GA   V G V +    +  V
Sbjct: 59  TIVRQDLQRSGKFTNIDAGS---TPVSETDSVDLGAWKAKGANAFVAGSVNRLPNGQYEV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F+L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V ++   
Sbjct: 116 RFKLYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGNRGAFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              K  L + D DG +      S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---KYQLQISDSDGQDAHIALSSPEPII-SPAWSPDGTKVAYVSFEKKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G+   +++ +     I++V+   +   RLT    I+  
Sbjct: 230 GRRV-VVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G  +A+
Sbjct: 289 PTYSPDGQWIYFTSDRGGAPQIYKMPAQGESAGSAQRVTFTGSYN-TSPRVSPDGKELAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G  F + +    G     L + ++ ++P+++ +G+ ++++ + +G     L ++  
Sbjct: 348 ISRVGGAFKLYLQDLQGGSATGLTDTAHDESPSFAANGQYILYATQVNGRG--VLAAVST 405

Query: 424 NGRNETLIN-TPAYASDPQWVGFM 446
           +GR   +++       +P W  FM
Sbjct: 406 DGRTRQVLSVQGGNVREPSWGPFM 429


>gi|209776394|gb|ACI86509.1| periplasmic protein TolB [Escherichia coli]
          Length = 430

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 99/439 (22%), Positives = 196/439 (44%), Gaps = 18/439 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVS 70
           +++    L+      + + +HA V++  +S      P+ +   ++         +  +V+
Sbjct: 5   LRVAFGFLI-----LWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVA 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPLDRAHLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQL 118

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 119 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 178 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 235 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 295 WFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 354 GQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 411

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 412 ARLPATDGQVKFPAWSPYL 430


>gi|261822330|ref|YP_003260436.1| translocation protein TolB [Pectobacterium wasabiae WPP163]
 gi|261606343|gb|ACX88829.1| Tol-Pal system beta propeller repeat protein TolB [Pectobacterium
           wasabiae WPP163]
          Length = 430

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 99/432 (22%), Positives = 190/432 (43%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           + V     +   +HA V++       +  P+ +   K+         V  +V  DL+ S 
Sbjct: 7   VAVSFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDVGGIVGADLRNSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-- 135
            FN I  +   Q+      +     W +LG   +V G+V         V ++L D     
Sbjct: 67  KFNPIDANRMPQQPATASEV-TPAAWTALGIDAVVVGQVQPSADGSYLVSYQLVDTSGNP 125

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              +   +F  +    R  AHT SD++++ ++G KG F +RI +V ++   G     L V
Sbjct: 126 GNVLAQNQFKVTKQWLRYAAHTASDEVFEKLSGIKGAFRTRIAYVVQTN-GGQFPYELRV 184

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N +++     Q L  P +S +  K+AY T++        ++ T  + A +++ +
Sbjct: 185 ADYDGYN-QFVVHRSPQPLMSPAWSADGSKLAYVTFESGR--SALVIQTLANGAIRQVAS 241

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N   ++ PDS  
Sbjct: 242 FPRHNGAPSFSPDGNKLAFALSKSGSLNLYVMNLGSGQISQVTDGRSNNTEPTWFPDSQT 301

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + + SD+ G+ Q+Y +  NG   +R++ +   +  D   S  G  +     +G    I  
Sbjct: 302 LAYTSDQAGRPQVYKVNVNGGAPQRVTWEGSQNQ-DSDVSADGKFLVTVGSNGGAQHISK 360

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTP 434
           +       ++L +    + P+ +P+G  +I+S K+    GS L  +  +GR +  L  T 
Sbjct: 361 LDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSKQG--LGSVLQLVSTDGRFKARLPATD 418

Query: 435 AYASDPQWVGFM 446
                P W  ++
Sbjct: 419 GQVKFPAWSPYL 430


>gi|157146634|ref|YP_001453953.1| translocation protein TolB [Citrobacter koseri ATCC BAA-895]
 gi|157083839|gb|ABV13517.1| hypothetical protein CKO_02400 [Citrobacter koseri ATCC BAA-895]
          Length = 431

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 96/439 (21%), Positives = 188/439 (42%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M      +       +   +HA V++       +  P+ +   ++         +  +V 
Sbjct: 1   MMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFQWAGPGAAPEDIGGIVG 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+      + +   W++LG   +V G+V         V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPGTAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 120 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 179 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+    N   +
Sbjct: 236 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     + 
Sbjct: 296 WFPDSQNLAFTSDQAGRPQVYKVNVNGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSAN 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GQQHIAKQDLVAGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQVKFPAWSPYL 431


>gi|325498077|gb|EGC95936.1| translocation protein TolB [Escherichia fergusonii ECD227]
          Length = 431

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 103/439 (23%), Positives = 192/439 (43%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVS 70
           M      +       +   +HA V++  +       P+ +   K+         +  +VS
Sbjct: 1   MMKQALRVAFGFLMLWAAMLHAEVRIVIDGGVDSGRPIGVVPFKWAGPGAAPEDIGGIVS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+  +   + +   W++L    +V G+V         V ++L
Sbjct: 61  DDLRYSGKFNPLDRARLPQQPASAQEV-QPAAWSALAIDAVVVGQVTPNPDGSYNVAYQL 119

Query: 131 WDVKDR-KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D       ++ +  F     W R  AHT+SD++++ +TG KG F +R+ +V ++   G 
Sbjct: 120 VDTGGAPGTVLAQNSFKVNKQWLRYAAHTVSDEVFEKLTGIKGAFRTRLAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N  ++     Q L  P +SP+  K+AY T++      V  + T  + 
Sbjct: 179 FPYELRVSDYDGYNP-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSELV--IQTLANG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 236 AIRKVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +      G
Sbjct: 296 WFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGTQNQ-DADVSSDGKFMVMVSSDG 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            K  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GKQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQVKFPAWSPYL 431


>gi|15800456|ref|NP_286468.1| translocation protein TolB [Escherichia coli O157:H7 EDL933]
 gi|15830029|ref|NP_308802.1| translocation protein TolB [Escherichia coli O157:H7 str. Sakai]
 gi|16128715|ref|NP_415268.1| periplasmic protein [Escherichia coli str. K-12 substr. MG1655]
 gi|30062097|ref|NP_836268.1| translocation protein TolB [Shigella flexneri 2a str. 2457T]
 gi|74311264|ref|YP_309683.1| translocation protein TolB [Shigella sonnei Ss046]
 gi|89107598|ref|AP_001378.1| periplasmic protein [Escherichia coli str. K-12 substr. W3110]
 gi|110640948|ref|YP_668676.1| translocation protein TolB [Escherichia coli 536]
 gi|157154962|ref|YP_001461901.1| translocation protein TolB [Escherichia coli E24377A]
 gi|168779235|ref|ZP_02804242.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4076]
 gi|168786906|ref|ZP_02811913.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC869]
 gi|170020915|ref|YP_001725869.1| translocation protein TolB [Escherichia coli ATCC 8739]
 gi|170080407|ref|YP_001729727.1| periplasmic protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188496422|ref|ZP_03003692.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           53638]
 gi|189402960|ref|ZP_03006911.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4486]
 gi|208808867|ref|ZP_03251204.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4206]
 gi|208815738|ref|ZP_03256917.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4045]
 gi|209399861|ref|YP_002269374.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4115]
 gi|215485762|ref|YP_002328193.1| translocation protein TolB [Escherichia coli O127:H6 str. E2348/69]
 gi|217324392|ref|ZP_03440476.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. TW14588]
 gi|218557653|ref|YP_002390566.1| translocation protein TolB [Escherichia coli S88]
 gi|218688531|ref|YP_002396743.1| translocation protein TolB [Escherichia coli ED1a]
 gi|218694164|ref|YP_002401831.1| translocation protein TolB [Escherichia coli 55989]
 gi|218699112|ref|YP_002406741.1| translocation protein TolB [Escherichia coli IAI39]
 gi|218704067|ref|YP_002411586.1| translocation protein TolB [Escherichia coli UMN026]
 gi|238900005|ref|YP_002925801.1| periplasmic protein [Escherichia coli BW2952]
 gi|253774289|ref|YP_003037120.1| translocation protein TolB [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254160810|ref|YP_003043918.1| translocation protein TolB [Escherichia coli B str. REL606]
 gi|254791897|ref|YP_003076734.1| translocation protein TolB [Escherichia coli O157:H7 str. TW14359]
 gi|256021184|ref|ZP_05435049.1| translocation protein TolB [Shigella sp. D9]
 gi|256023657|ref|ZP_05437522.1| translocation protein TolB [Escherichia sp. 4_1_40B]
 gi|260842946|ref|YP_003220724.1| periplasmic protein TolB [Escherichia coli O103:H2 str. 12009]
 gi|260853975|ref|YP_003227866.1| periplasmic protein TolB [Escherichia coli O26:H11 str. 11368]
 gi|260866871|ref|YP_003233273.1| periplasmic protein TolB [Escherichia coli O111:H- str. 11128]
 gi|293403995|ref|ZP_06647989.1| tolB [Escherichia coli FVEC1412]
 gi|293409124|ref|ZP_06652700.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           B354]
 gi|293414025|ref|ZP_06656674.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           B185]
 gi|293433008|ref|ZP_06661436.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           B088]
 gi|297520453|ref|ZP_06938839.1| translocation protein TolB [Escherichia coli OP50]
 gi|298379775|ref|ZP_06989380.1| tolB [Escherichia coli FVEC1302]
 gi|306812853|ref|ZP_07447046.1| translocation protein TolB [Escherichia coli NC101]
 gi|307137353|ref|ZP_07496709.1| translocation protein TolB [Escherichia coli H736]
 gi|307314795|ref|ZP_07594389.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           W]
 gi|312965176|ref|ZP_07779413.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           2362-75]
 gi|312970819|ref|ZP_07784998.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           1827-70]
 gi|331641241|ref|ZP_08342376.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           H736]
 gi|331645891|ref|ZP_08346994.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           M605]
 gi|331651748|ref|ZP_08352767.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           M718]
 gi|331662100|ref|ZP_08363023.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA143]
 gi|331667107|ref|ZP_08367972.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA271]
 gi|331676422|ref|ZP_08377119.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           H591]
 gi|331682170|ref|ZP_08382792.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           H299]
 gi|67473560|sp|P0A855|TOLB_ECOLI RecName: Full=Protein tolB; Flags: Precursor
 gi|67473563|sp|P0A856|TOLB_ECOL6 RecName: Full=Protein tolB; Flags: Precursor
 gi|67473564|sp|P0A857|TOLB_ECO57 RecName: Full=Protein tolB; Flags: Precursor
 gi|118574579|sp|Q0TJV4|TOLB_ECOL5 RecName: Full=Protein tolB; Flags: Precursor
 gi|118574580|sp|Q1REI5|TOLB_ECOUT RecName: Full=Protein tolB; Flags: Precursor
 gi|119371062|sp|Q3Z464|TOLB_SHISS RecName: Full=Protein tolB; Flags: Precursor
 gi|166988075|sp|A7ZJC2|TOLB_ECO24 RecName: Full=Protein tolB; Flags: Precursor
 gi|189035982|sp|B1IXY9|TOLB_ECOLC RecName: Full=Protein tolB; Flags: Precursor
 gi|226705876|sp|B7MFZ3|TOLB_ECO45 RecName: Full=Protein tolB; Flags: Precursor
 gi|226705877|sp|B5YRE4|TOLB_ECO5E RecName: Full=Protein tolB; Flags: Precursor
 gi|226705878|sp|B7NMV9|TOLB_ECO7I RecName: Full=Protein tolB; Flags: Precursor
 gi|226705880|sp|B1X6S1|TOLB_ECODH RecName: Full=Protein tolB; Flags: Precursor
 gi|226705881|sp|B7N9Y9|TOLB_ECOLU RecName: Full=Protein tolB; Flags: Precursor
 gi|254764839|sp|B7ULM0|TOLB_ECO27 RecName: Full=Protein tolB; Flags: Precursor
 gi|254764840|sp|B7LAE7|TOLB_ECO55 RecName: Full=Protein tolB; Flags: Precursor
 gi|254764841|sp|B7MPN1|TOLB_ECO81 RecName: Full=Protein tolB; Flags: Precursor
 gi|259533852|sp|C4ZWL5|TOLB_ECOBW RecName: Full=Protein tolB; Flags: Precursor
 gi|12513673|gb|AAG55076.1|AE005252_12 periplasmic protein involved in the tonb-independent uptake of
           group A colicins [Escherichia coli O157:H7 str. EDL933]
 gi|1786961|gb|AAC73834.1| periplasmic protein [Escherichia coli str. K-12 substr. MG1655]
 gi|13360234|dbj|BAB34198.1| periplasmic protein TolB [Escherichia coli O157:H7 str. Sakai]
 gi|30040341|gb|AAP16074.1| periplasmic protein [Shigella flexneri 2a str. 2457T]
 gi|73854741|gb|AAZ87448.1| periplasmic protein [Shigella sonnei Ss046]
 gi|85674752|dbj|BAA35406.2| periplasmic protein [Escherichia coli str. K12 substr. W3110]
 gi|110342540|gb|ABG68777.1| TolB protein precursor [Escherichia coli 536]
 gi|157076992|gb|ABV16700.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           E24377A]
 gi|169755843|gb|ACA78542.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           ATCC 8739]
 gi|169888242|gb|ACB01949.1| periplasmic protein [Escherichia coli str. K-12 substr. DH10B]
 gi|188491621|gb|EDU66724.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           53638]
 gi|189002974|gb|EDU71960.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4076]
 gi|189363589|gb|EDU82008.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4486]
 gi|189373020|gb|EDU91436.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC869]
 gi|208728668|gb|EDZ78269.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4206]
 gi|208732386|gb|EDZ81074.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4045]
 gi|209161261|gb|ACI38694.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4115]
 gi|209776388|gb|ACI86506.1| periplasmic protein TolB [Escherichia coli]
 gi|209776390|gb|ACI86507.1| periplasmic protein TolB [Escherichia coli]
 gi|209776392|gb|ACI86508.1| periplasmic protein TolB [Escherichia coli]
 gi|209776396|gb|ACI86510.1| periplasmic protein TolB [Escherichia coli]
 gi|215263834|emb|CAS08172.1| periplasmic protein TolB [Escherichia coli O127:H6 str. E2348/69]
 gi|217320613|gb|EEC29037.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. TW14588]
 gi|218350896|emb|CAU96594.1| periplasmic protein [Escherichia coli 55989]
 gi|218364422|emb|CAR02102.1| periplasmic protein [Escherichia coli S88]
 gi|218369098|emb|CAR16852.1| periplasmic protein [Escherichia coli IAI39]
 gi|218426095|emb|CAR06913.1| periplasmic protein [Escherichia coli ED1a]
 gi|218431164|emb|CAR12040.1| periplasmic protein [Escherichia coli UMN026]
 gi|222032476|emb|CAP75215.1| Protein tolB [Escherichia coli LF82]
 gi|238862004|gb|ACR64002.1| periplasmic protein [Escherichia coli BW2952]
 gi|242376502|emb|CAQ31206.1| tolB, subunit of The Tol-Pal Cell Envelope Complex, Colicin S4
           Transport System and The Colicin A Import System
           [Escherichia coli BL21(DE3)]
 gi|253325333|gb|ACT29935.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253972711|gb|ACT38382.1| translocation protein TolB precursor [Escherichia coli B str.
           REL606]
 gi|253976905|gb|ACT42575.1| translocation protein TolB precursor [Escherichia coli BL21(DE3)]
 gi|254591297|gb|ACT70658.1| periplasmic protein [Escherichia coli O157:H7 str. TW14359]
 gi|257752624|dbj|BAI24126.1| periplasmic protein TolB [Escherichia coli O26:H11 str. 11368]
 gi|257758093|dbj|BAI29590.1| periplasmic protein TolB [Escherichia coli O103:H2 str. 12009]
 gi|257763227|dbj|BAI34722.1| periplasmic protein TolB [Escherichia coli O111:H- str. 11128]
 gi|260450106|gb|ACX40528.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           DH1]
 gi|281177883|dbj|BAI54213.1| TolB protein [Escherichia coli SE15]
 gi|281599944|gb|ADA72928.1| Protein tolB precursor [Shigella flexneri 2002017]
 gi|284920527|emb|CBG33589.1| colicin import protein [Escherichia coli 042]
 gi|291323827|gb|EFE63249.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           B088]
 gi|291428581|gb|EFF01606.1| tolB [Escherichia coli FVEC1412]
 gi|291434083|gb|EFF07056.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           B185]
 gi|291469592|gb|EFF12076.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           B354]
 gi|294492013|gb|ADE90769.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           IHE3034]
 gi|298279473|gb|EFI20981.1| tolB [Escherichia coli FVEC1302]
 gi|305853616|gb|EFM54055.1| translocation protein TolB [Escherichia coli NC101]
 gi|306905693|gb|EFN36221.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           W]
 gi|307552591|gb|ADN45366.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           ABU 83972]
 gi|307627846|gb|ADN72150.1| translocation protein TolB [Escherichia coli UM146]
 gi|309700962|emb|CBJ00259.1| colicin import protein [Escherichia coli ETEC H10407]
 gi|310336580|gb|EFQ01747.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           1827-70]
 gi|312290267|gb|EFR18150.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           2362-75]
 gi|312945264|gb|ADR26091.1| translocation protein TolB [Escherichia coli O83:H1 str. NRG 857C]
 gi|313649617|gb|EFS14041.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri 2a str. 2457T]
 gi|315059983|gb|ADT74310.1| periplasmic protein [Escherichia coli W]
 gi|315135397|dbj|BAJ42556.1| tolB [Escherichia coli DH1]
 gi|315614616|gb|EFU95258.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           3431]
 gi|320179419|gb|EFW54376.1| translocation protein TolB [Shigella boydii ATCC 9905]
 gi|320193145|gb|EFW67785.1| translocation protein TolB [Escherichia coli O157:H7 str. EC1212]
 gi|320198140|gb|EFW72744.1| translocation protein TolB [Escherichia coli EC4100B]
 gi|320637998|gb|EFX07767.1| translocation protein TolB [Escherichia coli O157:H7 str. G5101]
 gi|320643394|gb|EFX12574.1| translocation protein TolB [Escherichia coli O157:H- str. 493-89]
 gi|320648688|gb|EFX17324.1| translocation protein TolB [Escherichia coli O157:H- str. H 2687]
 gi|320654326|gb|EFX22379.1| translocation protein TolB [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320659958|gb|EFX27500.1| translocation protein TolB [Escherichia coli O55:H7 str. USDA 5905]
 gi|320664784|gb|EFX31922.1| translocation protein TolB [Escherichia coli O157:H7 str. LSU-61]
 gi|323153744|gb|EFZ39991.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           EPECa14]
 gi|323158792|gb|EFZ44805.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           E128010]
 gi|323163899|gb|EFZ49709.1| tol-Pal system beta propeller repeat protein TolB [Shigella sonnei
           53G]
 gi|323180020|gb|EFZ65576.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           1180]
 gi|323185099|gb|EFZ70465.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           1357]
 gi|323191085|gb|EFZ76350.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           RN587/1]
 gi|323379457|gb|ADX51725.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           KO11]
 gi|323942963|gb|EGB39127.1| tol-Pal system beta propeller TolB [Escherichia coli E482]
 gi|323953134|gb|EGB49001.1| tol-Pal system beta propeller TolB [Escherichia coli H252]
 gi|323958484|gb|EGB54190.1| tol-Pal system beta propeller TolB [Escherichia coli H263]
 gi|323967343|gb|EGB62764.1| tol-Pal system beta propeller TolB [Escherichia coli M863]
 gi|323976279|gb|EGB71369.1| tol-Pal system beta propeller TolB [Escherichia coli TW10509]
 gi|324116282|gb|EGC10203.1| tol-Pal system beta propeller TolB [Escherichia coli E1167]
 gi|326341511|gb|EGD65301.1| translocation protein TolB [Escherichia coli O157:H7 str. 1044]
 gi|326345730|gb|EGD69469.1| translocation protein TolB [Escherichia coli O157:H7 str. 1125]
 gi|327254429|gb|EGE66051.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           STEC_7v]
 gi|330910491|gb|EGH39001.1| TolB protein precursor [Escherichia coli AA86]
 gi|331038039|gb|EGI10259.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           H736]
 gi|331044643|gb|EGI16770.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           M605]
 gi|331050026|gb|EGI22084.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           M718]
 gi|331060522|gb|EGI32486.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA143]
 gi|331065463|gb|EGI37356.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           TA271]
 gi|331075915|gb|EGI47212.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           H591]
 gi|331080594|gb|EGI51770.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           H299]
 gi|332093801|gb|EGI98855.1| tol-Pal system beta propeller repeat protein TolB [Shigella boydii
           5216-82]
 gi|332342077|gb|AEE55411.1| translocation protein TolB [Escherichia coli UMNK88]
 gi|332760891|gb|EGJ91179.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri 4343-70]
 gi|332761319|gb|EGJ91605.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri 2747-71]
 gi|332763940|gb|EGJ94178.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri K-671]
 gi|332768161|gb|EGJ98346.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri 2930-71]
 gi|333007349|gb|EGK26829.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri VA-6]
 gi|333008017|gb|EGK27493.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri K-218]
 gi|333010141|gb|EGK29576.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri K-272]
 gi|333021093|gb|EGK40350.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri K-227]
 gi|333021479|gb|EGK40729.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           flexneri K-304]
          Length = 430

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 99/439 (22%), Positives = 196/439 (44%), Gaps = 18/439 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVS 70
           +++    L+      + + +HA V++  +S      P+ +   ++         +  +V+
Sbjct: 5   LRVAFGFLI-----LWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVA 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPLDRARLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQL 118

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 119 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 178 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 235 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 295 WFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 354 GQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 411

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 412 ARLPATDGQVKFPAWSPYL 430


>gi|50120312|ref|YP_049479.1| translocation protein TolB [Pectobacterium atrosepticum SCRI1043]
 gi|67461950|sp|Q6D7F2|TOLB_ERWCT RecName: Full=Protein tolB; Flags: Precursor
 gi|49610838|emb|CAG74283.1| TolB protein [Pectobacterium atrosepticum SCRI1043]
          Length = 430

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 99/432 (22%), Positives = 190/432 (43%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           + V     +   +HA V++       +  P+ +   K+         V  +V  DL+ S 
Sbjct: 7   VAVSFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDVGAIVGADLRNSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-- 135
            FN I  +   Q+      +     W +LG   +V G+V         V ++L D     
Sbjct: 67  KFNPIDANRMPQQPATASEV-TPAAWTALGIDAVVVGQVQPSADGSYLVSYQLVDTSGNP 125

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              +   +F  +    R  AHT SD++++ ++G KG F +RI +V ++   G     L V
Sbjct: 126 GNVLAQNQFKVTKQWLRYAAHTASDEVFEKLSGIKGAFRTRIAYVVQTN-GGQFPYELRV 184

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N +++     Q L  P +S +  K+AY T++        ++ T  + A +++ +
Sbjct: 185 ADYDGYN-QFVVHRSPQPLMSPAWSADGSKLAYVTFESGR--SALVIQTLANGAIRQVAS 241

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F     AP FS +G +   ++ K  ++++Y ++L S     +T+    N   ++ PDS  
Sbjct: 242 FPRHNGAPSFSPDGSKLAFALSKSGSLNLYVMNLGSGQISPVTDGRSNNTEPTWFPDSQT 301

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + + SD+ G+ Q+Y + +NG   +R++ +   +  D   S  G  +     +G    I  
Sbjct: 302 LAYTSDQAGRPQVYKVNANGGAPQRVTWEGSQNQ-DSDVSADGKFLVTVSSNGGAQHISK 360

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTP 434
           +       ++L +    + P+ +P+G  +I+S K+    GS L  +  +GR +  L  T 
Sbjct: 361 LDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSKQG--LGSVLQLVSTDGRFKARLPATD 418

Query: 435 AYASDPQWVGFM 446
                P W  ++
Sbjct: 419 GQVKFPAWSPYL 430


>gi|218553267|ref|YP_002386180.1| translocation protein TolB [Escherichia coli IAI1]
 gi|226705879|sp|B7M6B0|TOLB_ECO8A RecName: Full=Protein tolB; Flags: Precursor
 gi|218360035|emb|CAQ97582.1| periplasmic protein [Escherichia coli IAI1]
          Length = 430

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 100/439 (22%), Positives = 197/439 (44%), Gaps = 18/439 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVS 70
           +++    L+      + + +HA V++  +S      P+ +   ++V        +  +V+
Sbjct: 5   LRVAFGFLI-----LWASVLHAEVRIVIDSGVDSGRPIGVVPFQWVGPGAAPEDIGGIVA 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPLDRARLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQL 118

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 119 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 178 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 235 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 295 WFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 354 GQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 411

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 412 ARLPATDGQVKFPAWSPYL 430


>gi|15596169|ref|NP_249663.1| translocation protein TolB [Pseudomonas aeruginosa PAO1]
 gi|12644681|sp|P50601|TOLB_PSEAE RecName: Full=Protein tolB; Flags: Precursor
 gi|9946879|gb|AAG04361.1|AE004530_14 TolB protein [Pseudomonas aeruginosa PAO1]
 gi|5733837|gb|AAC44661.2| TolB [Pseudomonas aeruginosa]
          Length = 432

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 106/417 (25%), Positives = 198/417 (47%), Gaps = 12/417 (2%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
            + +++ +    P+++    F   + L   +S ++  DL+ S  F  + + +   +    
Sbjct: 24  PLVISSGNDRAIPIAVVPFGFQGGNVLPEDMSNIIGNDLRNSGYFEPLPRQNMISQPAQA 83

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
             +  F+DW ++G   ++ G ++  G  RL+V++ L+DV   +Q++      S    R +
Sbjct: 84  SEVI-FRDWKAVGVNYVMVGNIVPAG-GRLQVQYALFDVGTEQQVLTGSVTGSTDQLRDM 141

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVS-GIIKNSLCVMDRDGANIRYLTPSRDQI 213
           +H I+D  ++ +TG KG F++++L+V+    S    + +L   D DGA    L  SR+ I
Sbjct: 142 SHYIADQSFEKLTGIKGAFSTKMLYVTAERFSVDNTRYTLQRSDYDGARPVTLLQSREPI 201

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  PRFSP+ +++AY +++ +   R+++      R  ++I NF  +  AP FS +G R  
Sbjct: 202 V-SPRFSPDGRRIAYVSFEQKRP-RIFIQYVDTGR-REQITNFEGLNGAPAFSPDGNRLA 258

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             + +D   +IY +DL S A  RLTN L I+    +  D S + F SDR GK Q+Y M  
Sbjct: 259 FVLSRDGNPEIYVMDLGSRALRRLTNNLAIDTEPFWGKDGSTLYFTSDRGGKPQIYKMNV 318

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSN 391
           N     R++     +  +P  S     +           F I          R+L   + 
Sbjct: 319 NSGAVDRVTFIGNYNA-NPKLSADEKTLVMVHRQQGYTNFQIAAQDLQRGNLRVLSNTTL 377

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFMD 447
             +PT +P+G  LI++ ++       L  + +NGR    + T      +P W  +++
Sbjct: 378 DDSPTVAPNGTMLIYATRQQDRG--VLMLVSINGRVRIPLPTAQGDVREPSWSPYLN 432


>gi|107100428|ref|ZP_01364346.1| hypothetical protein PaerPA_01001453 [Pseudomonas aeruginosa PACS2]
 gi|116048897|ref|YP_792302.1| translocation protein TolB [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218893057|ref|YP_002441926.1| translocation protein TolB [Pseudomonas aeruginosa LESB58]
 gi|254239320|ref|ZP_04932643.1| TolB protein [Pseudomonas aeruginosa C3719]
 gi|254245255|ref|ZP_04938577.1| TolB protein [Pseudomonas aeruginosa 2192]
 gi|296390669|ref|ZP_06880144.1| translocation protein TolB [Pseudomonas aeruginosa PAb1]
 gi|313105859|ref|ZP_07792122.1| TolB protein [Pseudomonas aeruginosa 39016]
 gi|115584118|gb|ABJ10133.1| TolB protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126171251|gb|EAZ56762.1| TolB protein [Pseudomonas aeruginosa C3719]
 gi|126198633|gb|EAZ62696.1| TolB protein [Pseudomonas aeruginosa 2192]
 gi|218773285|emb|CAW29097.1| TolB protein [Pseudomonas aeruginosa LESB58]
 gi|310878624|gb|EFQ37218.1| TolB protein [Pseudomonas aeruginosa 39016]
          Length = 432

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 106/417 (25%), Positives = 198/417 (47%), Gaps = 12/417 (2%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
            + +++ +    P+++    F   + L   +S ++  DL+ S  F  + + +   +    
Sbjct: 24  PLVISSGNDRAIPIAVVPFGFQGGNVLPEDMSNIIGNDLRNSGYFEPLPRQNMISQPAQA 83

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
             +  F+DW ++G   ++ G ++  G  RL+V++ L+DV   +Q++      S    R +
Sbjct: 84  SEVI-FRDWKAVGVNYVMVGNIVPAG-GRLQVQYALFDVGTEQQVLTGSVTGSTDQLRDM 141

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVS-GIIKNSLCVMDRDGANIRYLTPSRDQI 213
           +H I+D  ++ +TG KG F++++L+V+    S    + +L   D DGA    L  SR+ I
Sbjct: 142 SHYIADQSFEKLTGIKGAFSTKMLYVTAERFSVDNTRYTLQRSDYDGARPVTLLQSREPI 201

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  PRFSP+ +++AY +++ +   R+++      R  ++I NF  +  AP FS +G R  
Sbjct: 202 V-SPRFSPDGRRIAYVSFEQKRP-RIFIQYVDTGR-REQITNFEGLNGAPAFSPDGNRLA 258

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             + +D   +IY +DL S A  RLTN L I+    +  D S + F SDR GK Q+Y M  
Sbjct: 259 FVLSRDGNPEIYVMDLGSRALRRLTNNLAIDTEPFWGKDGSTLYFTSDRGGKPQIYKMNV 318

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSN 391
           N     R++     +  +P  S     +           F I          R+L   + 
Sbjct: 319 NSGAVDRVTFIGNYNA-NPKLSADEKTLVMVHRQQGYTNFQIAAQDLQRGNLRVLSNTTL 377

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFMD 447
             +PT +P+G  LI++ ++       L  + +NGR    + T      +P W  +++
Sbjct: 378 DDSPTVAPNGTMLIYATRQQDRG--VLMLVSINGRVRIPLPTAQGDVREPSWSPYLN 432


>gi|320172957|gb|EFW48185.1| translocation protein TolB [Shigella dysenteriae CDC 74-1112]
          Length = 430

 Score =  382 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 99/439 (22%), Positives = 196/439 (44%), Gaps = 18/439 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVS 70
           +++    L+      + + +HA V++  +S      P+ +   ++         +  +V+
Sbjct: 5   LRVAFGFLI-----LWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVA 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPLDRARLPQQPGSAQEV-QPSAWSALGIDAVVVGQVTPNPDGSYNVAYQL 118

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 119 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 178 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 235 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQVRQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 295 WFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 354 GQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 411

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 412 ARLPATDGQVKFPAWSPYL 430


>gi|82776018|ref|YP_402365.1| translocation protein TolB [Shigella dysenteriae Sd197]
 gi|119371061|sp|Q32II1|TOLB_SHIDS RecName: Full=Protein tolB; Flags: Precursor
 gi|81240166|gb|ABB60876.1| periplasmic protein [Shigella dysenteriae Sd197]
          Length = 430

 Score =  382 bits (980), Expect = e-103,   Method: Composition-based stats.
 Identities = 99/439 (22%), Positives = 197/439 (44%), Gaps = 18/439 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVS 70
           +++    L+      + + +HA V++  +S      P+ +   ++         +  +V+
Sbjct: 5   LRVAFGFLI-----LWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVA 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPLDRARLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQL 118

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R  +HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 119 VDTGGAPGTVLAQNSYKVNKQWLRYASHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 178 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 235 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 295 WFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 354 GQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 411

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 412 ARLPATDGQVKFPAWSPYL 430


>gi|146310896|ref|YP_001175970.1| translocation protein TolB [Enterobacter sp. 638]
 gi|166988076|sp|A4W889|TOLB_ENT38 RecName: Full=Protein tolB; Flags: Precursor
 gi|145317772|gb|ABP59919.1| TolB, N-terminal domain protein [Enterobacter sp. 638]
          Length = 430

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 96/432 (22%), Positives = 189/432 (43%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           + V     +   +HA V++       +  P+ +   ++         +  +V+ DL+ S 
Sbjct: 7   VAVSFFMLWAAVLHAEVRIEITQGVDSARPIGVVPFQWAGPGAAPEDIGGIVAADLRNSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-- 135
            FN + +    Q+      + +   W++LG   +V G+V         V ++L D     
Sbjct: 67  KFNPLDRSRLPQQPGTAQEV-QPAAWSALGIDAVVVGQVTPSPDGDYNVTYQLVDTGGAP 125

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G     L V
Sbjct: 126 GTVLAQNTYKVNKKWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRV 184

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N ++      Q L  P ++P+  K+AY T++        ++ T  + A +++ +
Sbjct: 185 SDYDGYN-QFTVHRSPQPLMSPAWTPDGSKLAYVTFESGR--SALVIQTLSNGAVRQVAS 241

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+    N   ++ PDS  
Sbjct: 242 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDVGSGQIRQVTDGRSNNTEPTWFPDSQN 301

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G +  I  
Sbjct: 302 LAFTSDQAGRPQVYKVNVNGGTPQRITWEGSQNQ-DADVSSDGKTMVMVSSAGGQQHIAK 360

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTP 434
                   ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +  L  T 
Sbjct: 361 QDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATD 418

Query: 435 AYASDPQWVGFM 446
                P W  ++
Sbjct: 419 GQVKSPAWSPYL 430


>gi|251790482|ref|YP_003005203.1| translocation protein TolB [Dickeya zeae Ech1591]
 gi|247539103|gb|ACT07724.1| Tol-Pal system beta propeller repeat protein TolB [Dickeya zeae
           Ech1591]
          Length = 428

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 103/438 (23%), Positives = 193/438 (44%), Gaps = 18/438 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID-ELGGKVSEVVSK 71
           +KI L  L+      +   +HA V++       S   IA   F S    +  ++  +V+ 
Sbjct: 5   LKIALSFLM-----LWTAVLHAEVRIEITQGVDSARPIAVVPFKSAGGAVPEEIGNIVAA 59

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  FN I      Q+      +     W +LG   ++ G+V         V ++L 
Sbjct: 60  DLRNSGKFNPIDPSRMPQQPGTAAEV-TPSAWTALGIDAVIVGQVQPTADG-YLVSYQLV 117

Query: 132 DV--KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           D        +   +F  +    R  AHT SD++++ ++G KG F +RI +V ++   G  
Sbjct: 118 DTSGNAGSVLAQNQFKVTKQWLRYAAHTASDEVFEKLSGIKGAFRTRIAYVVQTN-GGQY 176

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L V D DG N +++     + L  P +S +  K+AY T++        ++ T  +  
Sbjct: 177 PYELRVADYDGYN-QFVVHRSPEPLMSPSWSSDGSKLAYVTFESGR--SALVVQTLANGD 233

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I +F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N   ++
Sbjct: 234 IRQIASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMNLGSGQISQVTDGRSNNTEPTW 293

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PDS  + + SD+ G+ Q+Y +  NG   +R++ +   +  D   S  G  +     +G 
Sbjct: 294 LPDSQTLAYTSDQAGRPQIYKVGINGGAPQRLTWEGSQNQ-DAEISSDGKFLVMVSSNGG 352

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE- 428
              I          ++L +    + P+ +P+G  +I+S K+    GS L  +  +GR + 
Sbjct: 353 AQHIAKQDLVTGGVQVLTDTFLDETPSIAPNGTMVIYSSKQG--LGSVLQLVSTDGRFKA 410

Query: 429 TLINTPAYASDPQWVGFM 446
            L  T      P W  +M
Sbjct: 411 RLPATDGQVRFPAWSPYM 428


>gi|114562639|ref|YP_750152.1| TolB domain-containing protein [Shewanella frigidimarina NCIMB 400]
 gi|122941016|sp|Q084K1|TOLB_SHEFN RecName: Full=Protein tolB; Flags: Precursor
 gi|114333932|gb|ABI71314.1| TolB, N-terminal domain protein [Shewanella frigidimarina NCIMB
           400]
          Length = 442

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 112/447 (25%), Positives = 199/447 (44%), Gaps = 23/447 (5%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSAN--YSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
           NL   L L+     T   A + +          P+++    +         +S+VV+ DL
Sbjct: 3   NLAKWLTLVLIVLTTPARAALDIVITEGVDAARPIAVVPFVWQGQGPAPASISDVVASDL 62

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  F  +   +  Q   +  +    Q+W ++ A+ LV G V   G D+  V F L D+
Sbjct: 63  SRSGTFKTLDVRALPQSTISSVNGFTAQNWANVEAEALVVGTVKPYGADQYLVSFELIDL 122

Query: 134 KDRKQIIGK-------------KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
              +   GK             +   S   +R+ +H ISD +Y+ +TG +G F +RI +V
Sbjct: 123 VKAQLQAGKGPQNNNELLLESRETVISANQFRQYSHRISDIVYEKLTGIRGAFLTRIAYV 182

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                       L + D DG N + L  S +  L  P +SP+ +++AY ++++     ++
Sbjct: 183 VVKQGQ-KAPYHLMIADYDGYNEQMLLRSPEP-LMSPTWSPDGRRLAYVSFENRKA-EIF 239

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D    +    + +F  +  AP FS +GK+  +++ KD   +IY VD+ + AT R+T  
Sbjct: 240 VQDI-YSQTRTLVSSFDGINGAPAFSPDGKKLAVTLSKDGQPEIYVVDIATKATRRITEH 298

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+   S+ PD   I+F S+R GK QLY +  + +   R++ + E +      SP G  
Sbjct: 299 YAIDTEPSWFPDGKSILFTSERGGKPQLYRVSLDTNKVSRMTFEGEWNLGG-SISPDGRS 357

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + F   +  KF I  M       ++L      ++P+ +P+G  +I+     G     L +
Sbjct: 358 MIFVNRTNGKFHIARMDLATRFMQVLSSTQLDESPSVAPNGTMVIYGTTHQGKQ--VLAA 415

Query: 421 IDLNGRNE-TLINTPAYASDPQWVGFM 446
           + ++GR +  L         P W  F+
Sbjct: 416 VSMDGRFKARLPVGQGEVKSPAWSPFL 442


>gi|187733089|ref|YP_001879397.1| translocation protein TolB [Shigella boydii CDC 3083-94]
 gi|226705895|sp|B2TUC6|TOLB_SHIB3 RecName: Full=Protein tolB; Flags: Precursor
 gi|187430081|gb|ACD09355.1| tol-Pal system beta propeller repeat protein TolB [Shigella boydii
           CDC 3083-94]
          Length = 430

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 99/439 (22%), Positives = 196/439 (44%), Gaps = 18/439 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVS 70
           +++    L+      + + +HA V++  +S      P+ +   ++         +  +V+
Sbjct: 5   LRVAFGFLI-----LWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVA 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPLDRARLPQQPGSAQEV-QPSAWSALGIDAVVVGQVTPNPDGSYNVAYQL 118

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 119 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 178 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 235 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 295 WFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 354 GQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 411

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 412 ARLPATDGQVKFPAWSPYL 430


>gi|295675612|ref|YP_003604136.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           CCGE1002]
 gi|295435455|gb|ADG14625.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           CCGE1002]
          Length = 430

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 200/444 (45%), Gaps = 21/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L ++  +   L+ +GG    + +A + V       +   IA   F +      +VS
Sbjct: 3   LMTKLGLRTLVATCLIAVGG----AANAQLNVLVTGVGSTQFPIATANFANEANSPQQVS 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V +DLQRS  F  +   S      +         W + GA   V G V +    +  V
Sbjct: 59  TIVRQDLQRSGKFTNVDAGS---TPVSETDSVDLGAWKAKGANAFVAGSVNRLPNGQYEV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F+L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V +S   
Sbjct: 116 RFKLYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGNRGVFATRLSYVIKSGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG +      S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQDAHIALSSPEPII-SPAWSPDGTKVAYVSFEKKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G+   +++ +     I++V+   +   RLT    I+  
Sbjct: 230 GRRI-VVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +YSPD   I F SDR G  Q+Y M + G    + +R++     +   P  SP G  +A+
Sbjct: 289 PTYSPDGQWIYFTSDRGGAPQIYKMPAQGESAGNAQRVTFTGSYN-TSPRVSPDGKELAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G  F + +    G     L + S+ ++P+++ +G+ ++++ + +G     L ++  
Sbjct: 348 ISRVGGGFKLYIQDLQGGTATGLTDTSHDESPSFAANGQYILYATQVNGRG--VLAAVST 405

Query: 424 NGRNETLIN-TPAYASDPQWVGFM 446
           +GR   +++       +P W  FM
Sbjct: 406 DGRTRQVLSVQGGSVREPSWGPFM 429


>gi|237730721|ref|ZP_04561202.1| translocation protein TolB [Citrobacter sp. 30_2]
 gi|226906260|gb|EEH92178.1| translocation protein TolB [Citrobacter sp. 30_2]
          Length = 431

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 96/439 (21%), Positives = 188/439 (42%), Gaps = 13/439 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M      +       +   +HA V++       +  P+ +   ++         +  +V 
Sbjct: 1   MMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFQWAGPGAAPEDIGGIVG 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+      + +   W++LG   +V G+V         V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPGTAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYSVAYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 120 VDTGGAPGTVLAQNTYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 179 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLSNG 235

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+    N   +
Sbjct: 236 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTEPT 295

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     + 
Sbjct: 296 WFPDSQNLAFTSDQAGRPQVYKVNVNGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSAN 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 355 GQQHIAKQDLVAGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 412

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 413 ARLPATDGQVKFPAWSPYL 431


>gi|330721823|gb|EGG99797.1| tolB protein precursor2C [gamma proteobacterium IMCC2047]
          Length = 432

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 103/434 (23%), Positives = 199/434 (45%), Gaps = 12/434 (2%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSP--VSIAFTKFVSIDELGGKVSEVVSKD 72
           +    +L+++ G       A  ++       +P   +     +     L   ++++VS D
Sbjct: 6   LRFTFVLLMVAGLLR-PAWASFEIEITQGVDNPTRFAAVPFGWQGAGLLPEDIAQIVSAD 64

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L RS  F  + Q +     T  D +  ++DW  L  + L+ G+V        RV + L+D
Sbjct: 65  LSRSGQFVALDQRNMMSLPTRADQV-YYRDWRILNQEFLLIGQVTPHANGGYRVHYELYD 123

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV-SGIIKN 191
           V  +++++     + P   R  AH ISD IY+ +TG KG F++RI +V+     +G  + 
Sbjct: 124 VYKQQRMVEGNIKAGPNELRDAAHLISDRIYERLTGIKGAFSTRIAYVTVDRPANGAERV 183

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V D DG   + +  SR+ I   P +SP+  K+AY +++      VY+ D    +  +
Sbjct: 184 RLLVADADGYREKIIRESREPI-MSPHWSPDGNKLAYVSFEGRRPA-VYIQDVSTGK-RQ 240

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           ++  FR +  AP +S +G++  +++ KD   +IY  D+ +   +R+T    I+   S+S 
Sbjct: 241 KVPAFRGINSAPAWSPDGRKLAMTLSKDGNPEIYIYDIATGKFQRVTRHFGIDTEPSWSA 300

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   ++F S R GK Q+Y  +      +R++ + + +      S  G  +         F
Sbjct: 301 DGKSLIFTSSRGGKPQIYRKEIQTGRLERLTFEGDYNARG-RLSADGRYLVMVHRQAGVF 359

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            I V      + R+L +    ++P+ +P+G  +I++   +      L  + L+GR ++  
Sbjct: 360 HIAVQDLKRDRLRVLTQTQLDESPSIAPNGSMIIYATNDNNKGI--LAFVSLDGRVKSRG 417

Query: 432 NTP-AYASDPQWVG 444
            +      +P W  
Sbjct: 418 PSKFGDVREPAWSP 431


>gi|56479691|ref|NP_706494.2| translocation protein TolB [Shigella flexneri 2a str. 301]
 gi|32699693|sp|Q83MM7|TOLB_SHIFL RecName: Full=Protein tolB; Flags: Precursor
 gi|56383242|gb|AAN42201.2| periplasmic protein [Shigella flexneri 2a str. 301]
          Length = 430

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 98/439 (22%), Positives = 194/439 (44%), Gaps = 18/439 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVS 70
           +++    L+      + + +HA V++  +S      P+ +   ++         +  +V+
Sbjct: 5   LRVAFGFLI-----LWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVA 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPLDRARLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQL 118

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 119 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++       L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 178 FPYELRVSDYDGYN-QFVVHRSPHPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 235 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD  G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 295 WFPDSQNLAFTSDLAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 354 GQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 411

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 412 ARLPATDGQVKFPAWSPYL 430


>gi|188534420|ref|YP_001908217.1| translocation protein TolB [Erwinia tasmaniensis Et1/99]
 gi|226705882|sp|B2VBQ7|TOLB_ERWT9 RecName: Full=Protein tolB; Flags: Precursor
 gi|188029462|emb|CAO97339.1| Protein TolB (translocation of group A colicins) [Erwinia
           tasmaniensis Et1/99]
          Length = 430

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 195/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +++ +L V          HA V++          P+ +   K+         
Sbjct: 1   MKQAFRVALSVLMLFV-------AVAHAEVRIEITQGVNTARPIGVVPFKWDGPGAAPED 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V+ DL+ S  FN I +    Q+ T+   + +   W +LG   +V G+V        
Sbjct: 54  IGGIVAADLRNSGKFNPIDRARLPQQPTSVAEV-QPAAWTALGIDAVVVGQVQPGADGSY 112

Query: 125 RVEFRLWDVKDR-KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D       ++ +  F     W R  AH+ SD+ ++ +T  KG F +RI +V +
Sbjct: 113 TVSYQLVDTSGNPGAVLAQNQFKVTKQWLRYAAHSASDESFEKLTAIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G     L V D DG N +++     Q L  P +SP+  KVAY T++        ++
Sbjct: 173 TN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTFESGK--SALVI 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A +++ +F     AP FS +G +   ++ K  +++IY +D+ S    ++T+  +
Sbjct: 229 QTLANGAIRQVASFPRHNGAPSFSPDGSKLAFALSKTGSLNIYVMDIGSGQISQITDGRY 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +   ++ PDS  + + SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  + 
Sbjct: 289 NSTEPTWFPDSQSLAYTSDQAGRPQIYKIGVNGGTAQRITWEGAQNQ-DADVSSDGKSMV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +     +          + L +    + P+ +P+G  +I+S  +    GS L  + 
Sbjct: 348 MISTNSGAQHVARQDLVTGAVQKLTDTFLDETPSLAPNGTMVIYSSTQG--MGSVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKFPAWSPYL 430


>gi|110804634|ref|YP_688154.1| translocation protein TolB [Shigella flexneri 5 str. 8401]
 gi|123147175|sp|Q0T6X7|TOLB_SHIF8 RecName: Full=Protein tolB; Flags: Precursor
 gi|110614182|gb|ABF02849.1| translocation protein TolB precursor [Shigella flexneri 5 str.
           8401]
          Length = 430

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 99/439 (22%), Positives = 195/439 (44%), Gaps = 18/439 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVS 70
           +++    L+      + + +HA V++  +S      P+ +   ++         +  +V+
Sbjct: 5   LRVAFGFLI-----LWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVA 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPLDRARLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQL 118

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 119 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 178 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 235 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD  G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 295 WFPDSQNLAFTSDLAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 354 GQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 411

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 412 ARLPATDGQVKFPAWSPYL 430


>gi|84623209|ref|YP_450581.1| translocation protein TolB [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|119371067|sp|Q2P570|TOLB_XANOM RecName: Full=Protein tolB; Flags: Precursor
 gi|84367149|dbj|BAE68307.1| TolB protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 439

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 120/442 (27%), Positives = 216/442 (48%), Gaps = 16/442 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAF-----VKVATNSANYSPVSIAFTKFVSIDELGG-KVS 66
           MK  L  L  L     P S  A      + +   SA+ +P+++    +          VS
Sbjct: 1   MKKPLRWLAALTVLLLPLSALAQQQGLTIDIVGGSASATPIAVIPMPYQGSGTAPQTDVS 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F  +      +K T    + +FQ W +L    +V GRV+  G+   RV
Sbjct: 61  AVVGADLDRSGQFRTLPAAQIVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMNAGEGAYRV 119

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E+ L+DV   ++++G    +   + R ++H ++D IY+ ITG +G F +RI +V+ S   
Sbjct: 120 EYELFDVAKGERMLGLAMTARANAMRDVSHQMADAIYEKITGVRGAFWTRIAYVTASGKG 179

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G ++ +L V D DG N + +  S +  L  P +SP+ +K+AY +++  +   +YL D   
Sbjct: 180 GAMRYALMVADSDGYNPQTIVRSAEP-LLSPNWSPDGKKLAYVSFERGNS-SIYLQDIAT 237

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             A + + +FR +  AP FS +G+R  +++ +    +IY +DL S    +LTN   I+  
Sbjct: 238 G-ARELVSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGIDTE 296

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +++PD   I F SDR G+ Q+Y + ++G    R++     +    V S  G  IA  + 
Sbjct: 297 PTWAPDGGSIYFTSDRGGRPQIYQVAASGGSANRVTFQGNYNATASV-SFDGKKIAVAQG 355

Query: 367 SGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           SG  + I +M +         L   S  ++P+++P+   ++++ ++ G     LY++  +
Sbjct: 356 SGNTYRIAMMDRSLGSPSWSTLSPGSLDESPSFAPNASMVLYAAREGGRG--VLYAVSSD 413

Query: 425 GR-NETLINTPAYASDPQWVGF 445
            R  + L+       +P W  +
Sbjct: 414 ARVRQRLVLADGDVREPAWGPY 435


>gi|283784493|ref|YP_003364358.1| colicin import protein [Citrobacter rodentium ICC168]
 gi|282947947|emb|CBG87511.1| colicin import protein [Citrobacter rodentium ICC168]
          Length = 430

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 95/428 (22%), Positives = 186/428 (43%), Gaps = 13/428 (3%)

Query: 24  IGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNL 81
               +   +HA V++       +  P+ +   ++         +  +V  DL+ S  FN 
Sbjct: 11  FLMLWAAVLHAEVRIEITQGVDSARPIGVVPFQWAGPGAAPEDIGGIVGADLRNSGKFNP 70

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQI 139
           + +    Q+      + +   W++LG   +V G+V         V ++L D        +
Sbjct: 71  LDRSRLPQQPGTAQEV-QPAAWSALGIDAVVIGQVTPNPDGSYNVAYQLVDTGGAPGTVL 129

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
               +  +    R   HT SD++++ +TG KG F +RI +V ++   G     L V D D
Sbjct: 130 AQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYD 188

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N +++     Q L  P +SP+  K+AY T++        ++ T  + A +++ +F   
Sbjct: 189 GYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLSNGAVRQVASFPRH 245

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP FS +G +   ++ K  ++++Y +D+ S    ++T+    N   ++ PDS  + F 
Sbjct: 246 NGAPAFSPDGSKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTEPTWFPDSQNLAFT 305

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +  +  I      
Sbjct: 306 SDQAGRPQVYKVNVNGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNNGQQHIAKQDLV 364

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYAS 438
               ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +  L  T     
Sbjct: 365 AGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVK 422

Query: 439 DPQWVGFM 446
            P W  ++
Sbjct: 423 FPAWSPYL 430


>gi|218549687|ref|YP_002383478.1| translocation protein TolB [Escherichia fergusonii ATCC 35469]
 gi|226705883|sp|B7LKL8|TOLB_ESCF3 RecName: Full=Protein tolB; Flags: Precursor
 gi|218357228|emb|CAQ89863.1| periplasmic protein [Escherichia fergusonii ATCC 35469]
          Length = 430

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 190/428 (44%), Gaps = 13/428 (3%)

Query: 24  IGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNL 81
               +   +HA V++  +       P+ +   K+         +  +VS DL+ S  FN 
Sbjct: 11  FLMLWAAMLHAEVRIVIDGGVDSGRPIGVVPFKWAGPGAAPEDIGGIVSDDLRYSGKFNP 70

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR-KQII 140
           + +    Q+  +   + +   W++L    +V G+V         V ++L D       ++
Sbjct: 71  LDRARLPQQPASAQEV-QPAAWSALAIDAVVVGQVTPNPDGSYNVTYQLVDTGGAPGTVL 129

Query: 141 GKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            +  F     W R  AHT+SD++++ +TG KG F +R+ +V ++   G     L V D D
Sbjct: 130 AQNSFKVNKQWLRYAAHTVSDEVFEKLTGIKGAFRTRLAYVVQTN-GGQFPYELRVSDYD 188

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N  ++     Q L  P +SP+  K+AY T++      V  + T  + A +++ +F   
Sbjct: 189 GYNP-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSELV--IQTLANGAIRKVASFPRH 245

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F 
Sbjct: 246 NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQNLAFT 305

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +      G K  I      
Sbjct: 306 SDQAGRPQVYKVNINGGAPQRITWEGTQNQ-DADVSSDGKFMVMVSSDGGKQHIAKQDLV 364

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYAS 438
               ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +  L  T     
Sbjct: 365 TGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVK 422

Query: 439 DPQWVGFM 446
            P W  ++
Sbjct: 423 FPAWSPYL 430


>gi|87118952|ref|ZP_01074850.1| tolB protein [Marinomonas sp. MED121]
 gi|86165343|gb|EAQ66610.1| tolB protein [Marinomonas sp. MED121]
          Length = 421

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 95/425 (22%), Positives = 194/425 (45%), Gaps = 11/425 (2%)

Query: 27  FFPTSIHAFVKVATNSANYS--PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ 84
                + A + +   S      P+++    +   D L   V++++  DL+RS +F  I +
Sbjct: 4   VLSNLVRAQLVIEITSGADQLLPLAVVPFAYEGRDGLPEDVAQIIENDLKRSGLFEAIPR 63

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK- 143
            +     +  + +  F+DW  L +  +V G V +   +   + F L +V  +K +     
Sbjct: 64  TNMLSLPSKKEDVH-FRDWRLLKSDYVVIGDVKQIDANNFEINFELINVLSQKTVEKHTG 122

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
                +  R  AH ISD IY+ +TG +G F++RIL+V+           L V D DG   
Sbjct: 123 LAVKVSGLRDAAHYISDKIYRLLTGVRGAFSTRILYVTAEGNRAEPTYRLQVADADGHRP 182

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +  S++ I   P +S N + + Y  + D     +++ +    +  ++I  +R +  AP
Sbjct: 183 QVIVESKEPI-LSPSWSRNGRFITYVMFRDRRP-NIFVQELATGK-RQKIAQYRGLNGAP 239

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +S +GK+  + + KD   +IY +D+ +   +R+TN   I+   S+ PD   IVF SDR 
Sbjct: 240 AWSPDGKQLALVLSKDGNPEIYVLDIATQKLQRITNHYSIDTEPSWEPDGKGIVFTSDRG 299

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  Q+Y +  +    +R++ + + +      +P G  +   + +   + I +      + 
Sbjct: 300 GNPQIYRVDISSKAVERVTFEGDLNTRA-RMTPDGRYLVTVQKNEGNYHIALQDMKNGRV 358

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQW 442
           ++L E    ++P+ +P+G  ++++    G     L  + ++G  +  L +      +P W
Sbjct: 359 QILTETYLDESPSIAPNGSMVMYATTYKGKGI--LAVVSVDGLVKYRLPSAAGEVREPAW 416

Query: 443 VGFMD 447
             F +
Sbjct: 417 SPFFE 421


>gi|188577428|ref|YP_001914357.1| translocation protein TolB [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|226705899|sp|B2STJ5|TOLB_XANOP RecName: Full=Protein tolB; Flags: Precursor
 gi|188521880|gb|ACD59825.1| Tol-Pal system beta propeller repeat protein TolB [Xanthomonas
           oryzae pv. oryzae PXO99A]
          Length = 439

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 121/442 (27%), Positives = 217/442 (49%), Gaps = 16/442 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAF-----VKVATNSANYSPVSIAFTKFVSIDELGG-KVS 66
           MK  L  L  L     P S  A      + +   SA+ +P+++    +   D      VS
Sbjct: 1   MKKPLRWLAALTVLLLPLSALAQQQGLTIDIVGGSASATPIAVIPMPYQGSDTAPQTDVS 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F  +      +K T    + +FQ W +L    +V GRV+  G+   RV
Sbjct: 61  AVVGADLDRSGQFRTLPAAQIVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMDAGEGAYRV 119

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E+ L+DV   ++++G    +   + R ++H ++D IY+ ITG +G F +RI +V+ S   
Sbjct: 120 EYELFDVAKGERMLGLAMTARANAMRDVSHQMADAIYEKITGVRGAFWTRIAYVTASGKG 179

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G ++ +L V D DG N + +  S +  L  P +SP+ +K+AY +++  +   +YL D   
Sbjct: 180 GAMRYALMVADSDGYNPQTIVRSAEP-LLSPNWSPDGKKLAYVSFERGNS-SIYLQDIAT 237

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             A + + +FR +  AP FS +G+R  +++ +    +IY +DL S    +LTN   I+  
Sbjct: 238 G-ARELVSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGIDTE 296

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +++PD   I F SDR G+ Q+Y + ++G    R++     +    V S  G  IA  + 
Sbjct: 297 PTWAPDGGSIYFTSDRGGRPQIYQVAASGGSANRVTFQGNYNATASV-SFDGKKIAVAQG 355

Query: 367 SGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           SG  + I +M +         L   S  ++P+++P+   ++++ ++ G     LY++  +
Sbjct: 356 SGNTYRIAMMDRSLGSPSWSTLSPGSLDESPSFAPNASMVLYAAREGGRG--VLYAVSSD 413

Query: 425 GR-NETLINTPAYASDPQWVGF 445
            R  + L+       +P W  +
Sbjct: 414 ARVRQRLVLADGDVREPAWGPY 435


>gi|324114315|gb|EGC08284.1| tol-Pal system beta propeller TolB [Escherichia fergusonii B253]
          Length = 430

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 102/428 (23%), Positives = 190/428 (44%), Gaps = 13/428 (3%)

Query: 24  IGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNL 81
               +   +HA V++  +       P+ +   K+         +  +VS DL+ S  FN 
Sbjct: 11  FLMLWAAMLHAEVRIVIDGGVDSGRPIGVVPFKWAGPGAAPEDIGGIVSDDLRYSGKFNP 70

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR-KQII 140
           + +    Q+  +   + +   W++L    +V G+V         V ++L D       ++
Sbjct: 71  LDRARLPQQPASAQEV-QPAAWSALAIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVL 129

Query: 141 GKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            +  F     W R  AHT+SD++++ +TG KG F +R+ +V ++   G     L V D D
Sbjct: 130 AQNSFKVNKQWLRYAAHTVSDEVFEKLTGIKGAFRTRLAYVVQTN-GGQFPYELRVSDYD 188

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N  ++     Q L  P +SP+  K+AY T++      V  + T  + A +++ +F   
Sbjct: 189 GYNP-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSELV--IQTLANGAIRKVASFPRH 245

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F 
Sbjct: 246 NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQNLAFT 305

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +      G K  I      
Sbjct: 306 SDQAGRPQVYKVNINGGAPQRITWEGTQNQ-DADVSSDGKFMVMVSSDGGKQHIAKQDLV 364

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYAS 438
               ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +  L  T     
Sbjct: 365 TGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVK 422

Query: 439 DPQWVGFM 446
            P W  ++
Sbjct: 423 FPAWSPYL 430


>gi|170769037|ref|ZP_02903490.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia
           albertii TW07627]
 gi|170122109|gb|EDS91040.1| Tol-Pal system beta propeller repeat protein TolB [Escherichia
           albertii TW07627]
          Length = 430

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 98/441 (22%), Positives = 195/441 (44%), Gaps = 16/441 (3%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATN--SANYSPVSIAFTKFVSIDELGGKVSEV 68
           +   + L    ++    +  ++HA V +     + +  P+ +   ++         +  +
Sbjct: 1   MKQALRLAFSFLI---LWTAAVHATVSIDITDWNDSARPIGVVPFQWAGPGAAPEDIGGI 57

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V+ DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V         V +
Sbjct: 58  VAADLRNSGKFNPLDRARLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAY 116

Query: 129 RLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   
Sbjct: 117 QLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-G 175

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  
Sbjct: 176 GQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLA 232

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N  
Sbjct: 233 NGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTE 292

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++ PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     
Sbjct: 293 PTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSS 351

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +G +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR
Sbjct: 352 NGGQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGR 409

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L  T      P W  ++
Sbjct: 410 FKARLPATDGQVKFPAWSPYL 430


>gi|82543167|ref|YP_407114.1| translocation protein TolB [Shigella boydii Sb227]
 gi|119371060|sp|Q324H2|TOLB_SHIBS RecName: Full=Protein tolB; Flags: Precursor
 gi|81244578|gb|ABB65286.1| TolB [Shigella boydii Sb227]
          Length = 430

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 98/439 (22%), Positives = 194/439 (44%), Gaps = 18/439 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVS 70
           +++    L+      + + +HA V++  +S      P+ +   ++         +  +V+
Sbjct: 5   LRVAFGFLI-----LWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVA 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPLDRARLPQQPGSAQEV-QPSAWSALGIDAVVVGQVTPNPDGSYNVAYQL 118

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 119 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++       L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 178 FPYELRVSDYDGYN-QFVVHRSPHPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 235 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD  G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 295 WFPDSQNLAFTSDLAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +
Sbjct: 354 GQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFK 411

Query: 429 -TLINTPAYASDPQWVGFM 446
             L  T      P W  ++
Sbjct: 412 ARLPATDGQVKFPAWSPYL 430


>gi|67461877|sp|Q5H299|TOLB_XANOR RecName: Full=Protein tolB; Flags: Precursor
          Length = 439

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 120/442 (27%), Positives = 216/442 (48%), Gaps = 16/442 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAF-----VKVATNSANYSPVSIAFTKFVSIDELGG-KVS 66
           MK  L  L  L     P S  A      + +   SA+ +P+++    +          VS
Sbjct: 1   MKKPLRWLAALTVLLLPLSALAQQQGLTIDIVGGSASATPIAVIPMPYQGSGTAPQTDVS 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F  +      +K T    + +FQ W +L    +V GRV+  G+   RV
Sbjct: 61  AVVGADLDRSGQFRTLPAAQIVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMDAGEGAYRV 119

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E+ L+DV   ++++G    +   + R ++H ++D IY+ ITG +G F +RI +V+ S   
Sbjct: 120 EYELFDVAKGERMLGLAMTARANAMRDVSHQMADAIYEKITGVRGAFWTRIAYVTASGKG 179

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G ++ +L V D DG N + +  S +  L  P +SP+ +K+AY +++  +   +YL D   
Sbjct: 180 GAMRYALMVADSDGYNPQTIVRSAEP-LLSPNWSPDGKKLAYVSFERGNS-SIYLQDIAT 237

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             A + + +FR +  AP FS +G+R  +++ +    +IY +DL S    +LTN   I+  
Sbjct: 238 G-ARELVSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGIDTE 296

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +++PD   I F SDR G+ Q+Y + ++G    R++     +    V S  G  IA  + 
Sbjct: 297 PTWAPDGGSIYFTSDRGGRPQIYQVAASGGSANRVTFQGNYNATASV-SFDGKKIAVAQG 355

Query: 367 SGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           SG  + I +M +         L   S  ++P+++P+   ++++ ++ G     LY++  +
Sbjct: 356 SGNTYRIAMMDRSLGSPSWSTLSPGSLDESPSFAPNASMVLYAAREGGRG--VLYAVSSD 413

Query: 425 GR-NETLINTPAYASDPQWVGF 445
            R  + L+       +P W  +
Sbjct: 414 ARVRQRLVLADGDVREPAWGPY 435


>gi|187922764|ref|YP_001894406.1| translocation protein TolB [Burkholderia phytofirmans PsJN]
 gi|226705872|sp|B2T077|TOLB_BURPP RecName: Full=Protein tolB; Flags: Precursor
 gi|187713958|gb|ACD15182.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           phytofirmans PsJN]
          Length = 430

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 104/444 (23%), Positives = 200/444 (45%), Gaps = 21/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L ++  +   L+ +GG    + HA + V       +   IA   F +      +VS
Sbjct: 3   LMTKLGLRTLVASCLIAVGG----AAHAQLNVLVTGVGSTQFPIATANFANEANSPQQVS 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V +DLQRS  F  I   S                W + GA   V+G V +    +  V
Sbjct: 59  TIVRQDLQRSGKFTNIDAGS---TPVAETDSVDLGSWKAKGANAFVSGSVNRLPNGQYEV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F+L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V ++   
Sbjct: 116 RFKLYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRGVFATRLSYVIKTGG- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG +      S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQDAHIALSSPEPII-SPAWSPDGTKVAYVSFEKKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G+   +++ +     I++V+   +   RLT    I+  
Sbjct: 230 GRRV-VVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +SPD   I F SDR G+ Q+Y M + G      +R++     +   P  SP G  +A+
Sbjct: 289 PCFSPDGQSIYFTSDRGGQPQIYKMSAQGENAGAAQRVTFTGSYN-TSPRVSPDGKQLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G  F + +    G+    L + ++ ++P+++ +G+ ++++ + +G     L ++  
Sbjct: 348 ISRVGGGFKLYIQDLQGNTATGLTDTTHDESPSFAANGQYILYATQVNGRG--VLAAVST 405

Query: 424 NGRNETLIN-TPAYASDPQWVGFM 446
           +GR   +++       +P W  FM
Sbjct: 406 DGRTRQVLSVQGGSVREPSWGPFM 429


>gi|152989051|ref|YP_001349885.1| translocation protein TolB [Pseudomonas aeruginosa PA7]
 gi|150964209|gb|ABR86234.1| Tol-Pal system beta propeller repeat protein TolB [Pseudomonas
           aeruginosa PA7]
          Length = 432

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 104/417 (24%), Positives = 198/417 (47%), Gaps = 12/417 (2%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
            + +++ +    P+++    F   + L   +S ++  DL+ S  F  + + +   +    
Sbjct: 24  PLVISSGNDRAIPIAVVPFGFQGGNVLPEDMSNIIGNDLRNSGYFEPLPRQNMISQPAQA 83

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
             +  F+DW ++G   ++ G ++  G  RL+V++ L+DV   +Q++      S    R +
Sbjct: 84  SEVI-FRDWKAVGVNYVMVGNIVPAG-GRLQVQYALFDVGTEQQVLTGSVTGSTDQLRDM 141

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVS-GIIKNSLCVMDRDGANIRYLTPSRDQI 213
           +H I+D  ++ +TG KG F++++L+V+    S    + +L   D DGA    L  SR+ I
Sbjct: 142 SHYIADQSFEKLTGIKGAFSTKMLYVTAERFSVDNTRYTLQRSDYDGARPVTLLQSREPI 201

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  PRFSP+ +++AY +++ +   R+++      R  ++I NF  +  AP FS +G R  
Sbjct: 202 V-SPRFSPDGRRIAYVSFEQKRP-RIFIQYVDTGR-REQITNFEGLNGAPAFSPDGNRLA 258

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             + +D   +IY +DL S +  RLTN L I+    +  D S + F SDR GK Q+Y M  
Sbjct: 259 FVLSRDGNPEIYVMDLGSRSLRRLTNNLAIDTEPFWGKDGSTLYFTSDRGGKPQIYKMNV 318

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSN 391
           +     R++     +  +P  S     +           F I          R+L   + 
Sbjct: 319 SSGAVDRVTFIGNYNA-NPKLSADEKTLVMVHRQQGYTNFQIAAQDLQRGNLRVLSNTTL 377

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFMD 447
             +PT +P+G  LI++ ++       L  + +NGR    + T      +P W  +++
Sbjct: 378 DDSPTVAPNGTMLIYATRQQDRG--VLMLVSINGRVRIPLPTAQGDVREPSWSPYLN 432


>gi|119775221|ref|YP_927961.1| translocation protein TolB [Shewanella amazonensis SB2B]
 gi|166988080|sp|A1S7D5|TOLB_SHEAM RecName: Full=Protein tolB; Flags: Precursor
 gi|119767721|gb|ABM00292.1| tolB protein [Shewanella amazonensis SB2B]
          Length = 441

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 102/442 (23%), Positives = 196/442 (44%), Gaps = 22/442 (4%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSAN--YSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
             +LI       + A + +          P+++    +     +  ++S+VV+ DL RS 
Sbjct: 7   WALLIIAALSLPVKAALDIVITEGVDAARPIAVVPFVWQGTGPVPSQISDVVASDLTRSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F  +      Q   +  +    Q W  + A+  V G +   G D+  V F L D+   +
Sbjct: 67  TFKPLDALGLPQSGISTLAEFAPQKWTGINAEAAVVGAIKPYGPDQYLVTFDLIDLLKAQ 126

Query: 138 ------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
                        +  ++   + A +R+  H ISD +Y+ +TG +G F +RI +V  +  
Sbjct: 127 LAGQAPLNKQDLLLDSRQTVITAAQFRQYGHRISDVVYEKLTGIRGAFLTRIAYVVVNHA 186

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  L + D DG N   L  S +  L  P +SP+ +++AY ++++     +++ D  
Sbjct: 187 E-KAPYRLMIADYDGYNEHMLLRSPEP-LMSPAWSPDGRRLAYVSFENRKA-EIFVQDIF 243

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +A  ++ +F  +  AP FS +GK   +++ KD   +IY++D+ +  T R+TN   I+ 
Sbjct: 244 T-QARTKVSSFPGINGAPSFSPDGKTLAVTLSKDGQSEIYTIDIATKTTRRITNHYAIDT 302

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             S+ PD   ++  S+R G+ QLY ++ +     R++ D E +      +P G  + F  
Sbjct: 303 EPSWFPDGKSLLITSERGGRPQLYKVELDSGKLTRLTFDGEWNLGG-SITPDGRTLIFVN 361

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +  KF I  M  +    ++L      ++P+ +P+G  +I+     G     L ++  +G
Sbjct: 362 RTNGKFNIARMDLETRFMQVLTTTRLDESPSVAPNGTMVIYGTTHQGRQ--VLAAVSTDG 419

Query: 426 RNE-TLINTPAYASDPQWVGFM 446
           R +  L         P W  F+
Sbjct: 420 RFKARLPAGQGEVKSPSWSPFL 441


>gi|296103329|ref|YP_003613475.1| translocation protein TolB [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
 gi|295057788|gb|ADF62526.1| translocation protein TolB [Enterobacter cloacae subsp. cloacae
           ATCC 13047]
          Length = 430

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 98/432 (22%), Positives = 188/432 (43%), Gaps = 13/432 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           +       +   +HA V++       +  P+ +   ++            +V+ DL+ S 
Sbjct: 7   VAFSFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFQWAGPGAAPEDAGGIVAADLRNSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-- 135
            FN + +    Q+  +   + +   W++LG   +V G+V         V ++L D     
Sbjct: 67  KFNPLDRSRLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAWQLVDTGGAP 125

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              +    +  +    R  AH  SD +++ +TG KG F +RI +V ++   G     L V
Sbjct: 126 GTVLAQNSYKVTKQYLRYAAHAASDAVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRV 184

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N ++L     Q L  P +SP+  K+AY T++        ++ T  + A +++ +
Sbjct: 185 SDYDGYN-QFLVKRSSQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANGAVRQVAS 241

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+    N   S+ PDS  
Sbjct: 242 FPRHNGAPSFSPDGSKLAFALSKTGSLNLYVMDIGSGQIRQVTDGRSNNTEPSWFPDSQN 301

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + F SD+ G+ Q+Y +  NG   +RI+ +   +    V S  G  +     +G +  I  
Sbjct: 302 LAFTSDQAGRPQIYKVNINGGAPQRITWEGSQNQNADVSS-DGKFMVMVSSNGGQQHIAK 360

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TP 434
                   ++L      + P+ +P+G  +I+S  +    GS L  +  +GR +  I  T 
Sbjct: 361 QDLVAGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARIPATD 418

Query: 435 AYASDPQWVGFM 446
                P W  ++
Sbjct: 419 GQVKSPAWSPYL 430


>gi|78485243|ref|YP_391168.1| TolB-like [Thiomicrospira crunogena XCL-2]
 gi|119371064|sp|Q31H79|TOLB_THICR RecName: Full=Protein tolB; Flags: Precursor
 gi|78363529|gb|ABB41494.1| TolB protein [Thiomicrospira crunogena XCL-2]
          Length = 432

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 112/430 (26%), Positives = 211/430 (49%), Gaps = 11/430 (2%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE---LGGKVSEVVSKDLQRSD 77
           +V     + TS++A + +  + ++ + V IA   F            ++ +V  DL RS 
Sbjct: 8   IVGFVFMWSTSVYADLTIQIDQSSDNAVPIALVPFEWKGAQLHPPQNITSIVGNDLLRSG 67

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F  + +     +    D I  F  W  LG   L+ GR+ +E     ++E R  D+  ++
Sbjct: 68  KFKAVDEAKLPSRPKTLDDI-DFYQWKQLGVDNLLMGRITEEANGTYQIEMRFVDLLRKE 126

Query: 138 QIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           Q+IGK++     S  R++AH +SD IY+ +TG +G FN+R+ +V+   V G  + SL V 
Sbjct: 127 QVIGKRWSGISKSLLRQVAHKMSDLIYEELTGIRGAFNTRMAYVTVRNVKGKKQYSLEVA 186

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D DG N + +  S   I   P +SP+ Q +AY ++++     V  + +   ++ + I  F
Sbjct: 187 DSDGYNSQPILRSSLPI-MSPSWSPDGQHLAYVSFENGRSQIV--LQSLDGKSRQIIAKF 243

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           + +  AP +S +GK+  +++ KD + D+Y +D+++    RLT    I   A ++P+   +
Sbjct: 244 KGINGAPAWSPDGKKLALTLSKDGSADVYIMDMKTRKLRRLTRNWAIETEAVWAPNGHSL 303

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            F SDR G+ Q++ +  +  + +RIS     +  +P  SP G  +A    +G  F I V+
Sbjct: 304 FFNSDRRGQPQIFQVFLDTGEMRRISYVGRYNA-NPAISPDGRYVAMVHANGG-FHIAVL 361

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                   +L +    ++PT+SP+G  ++++  + G     + S++ N   + L      
Sbjct: 362 DLYNEDFNILTKTYLDESPTFSPNGEMILYAMNQGGQGKLAVVSVNSN-VTQILSVQEGE 420

Query: 437 ASDPQWVGFM 446
              P W  ++
Sbjct: 421 VRSPSWGPYL 430


>gi|292487661|ref|YP_003530534.1| protein TolB [Erwinia amylovora CFBP1430]
 gi|292898898|ref|YP_003538267.1| TolB colicin import protein [Erwinia amylovora ATCC 49946]
 gi|291198746|emb|CBJ45855.1| TolB colicin import protein [Erwinia amylovora ATCC 49946]
 gi|291553081|emb|CBA20126.1| Protein tolB precursor [Erwinia amylovora CFBP1430]
          Length = 430

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 98/445 (22%), Positives = 196/445 (44%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +++ +L +          HA V++          P+ +   K+         
Sbjct: 1   MKQAFRVALSVLMLFI-------AVAHAEVRIEITQGVNTARPIGVMPFKWDGPGAAPED 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V+ DL+ S  FN I +    Q+ T+   + +   W +LG   ++ G+V        
Sbjct: 54  IGAIVAADLRNSGKFNPIDRARLPQQPTSVAEV-QPAAWTALGIDAVIVGQVQPGADGSY 112

Query: 125 RVEFRLWDV-KDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D   +   ++ +  F     W R  AHT SD+ ++ +T  KG F +RI +V +
Sbjct: 113 AVSYQLVDTSANPGAVLAQNQFKVTKQWLRYAAHTASDESFEKLTAIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G     L V D DG N +++     Q L  P +SP+  KVAY T++        ++
Sbjct: 173 TN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTFESGK--SALVI 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+  +
Sbjct: 229 QTLANGAIRQVASFPRHNGAPSFSPDGSKLAFALSKTGSLNLYVMDVGSGQIRQITDGRY 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +   ++ PDS  + + SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  + 
Sbjct: 289 NSTEPTWFPDSQSLAYTSDQAGRPQIYKIGVNGGTAQRITWEGAQNQ-DADVSADGKSMV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +     +          + L +    + P+ +P+G  +I+S  +    GS L  + 
Sbjct: 348 MISTNSGAQHVARQDLVTGAVQKLTDTFLDETPSLAPNGTMVIYSSTQG--MGSVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKFPAWSPYL 430


>gi|91792752|ref|YP_562403.1| TolB-like protein [Shewanella denitrificans OS217]
 gi|123356924|sp|Q12PE6|TOLB_SHEDO RecName: Full=Protein tolB; Flags: Precursor
 gi|91714754|gb|ABE54680.1| TolB-like protein [Shewanella denitrificans OS217]
          Length = 442

 Score =  380 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 100/450 (22%), Positives = 197/450 (43%), Gaps = 24/450 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSAN--YSPVSIAFTKFVSIDELGGKVSEVVS 70
           MKI L   L L        ++A + +          P+++    +        ++S++V 
Sbjct: 1   MKI-LAKWLTLATLMLTAQVNAALDIVITEGVDAARPIAVVPFVWEGPGAAPQQISDIVM 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F  +   +  Q   +  +      W  +GA+ +V G +   G D+  V F L
Sbjct: 60  GDLSRSGTFKPLDIRALPQHGISSVAQFAAASWGKVGAEAVVMGSIKPYGVDQFLVNFEL 119

Query: 131 WDVKDRK-------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            D+   +              +  ++   S   +R+  H ISD +Y+ +TG +G F +R 
Sbjct: 120 IDLVRAQSQALKGPQNNTELVLESRQTVISANQFRQYGHRISDIVYEKLTGIRGAFLTRT 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V            L + D DG N + L  S +  L  P +SP+ +++AY ++++    
Sbjct: 180 AYVVVKQGQ-KAPYHLMIADYDGYNEQMLLRSPEP-LMSPTWSPDGRRLAYVSFENRKA- 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ D    +    + ++  +  AP FS +GK+  +++ KD   ++Y +D+ + A +R+
Sbjct: 237 EIFVQDI-YSQTRTLVSSYPGINGAPSFSPDGKKLAVTLSKDGQPEVYVIDIATKAAKRI 295

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T+   I+   S+ PD   ++F S+R GK Q+Y +  +     R++ + E +      +P 
Sbjct: 296 TDHYSIDTEPSWYPDGKSLLFTSERGGKPQIYSVHLDTGKVSRVTFEGEWNLGG-SITPD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  + F   +  KF I  M       ++L      ++P+ +P+G  +I+     G     
Sbjct: 355 GRSMIFVNRTNGKFHIARMDLATRFLQVLSSTQLDESPSVAPNGTMVIYGTTHQGKQ--V 412

Query: 418 LYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           L ++ ++GR +  L         P W  F+
Sbjct: 413 LAAVSMDGRFKARLPVGQGEVKSPAWSPFL 442


>gi|87198418|ref|YP_495675.1| translocation protein TolB [Novosphingobium aromaticivorans DSM
           12444]
 gi|119371031|sp|Q2GBD2|TOLB1_NOVAD RecName: Full=Protein tolB 1; Flags: Precursor
 gi|87134099|gb|ABD24841.1| TolB-like protein [Novosphingobium aromaticivorans DSM 12444]
          Length = 451

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 145/411 (35%), Positives = 217/411 (52%), Gaps = 17/411 (4%)

Query: 48  VSIAFTKFV------------SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           + IA   F             S   LG  +++V+S +L+ + +F  +  +S  +      
Sbjct: 45  LGIAIPAFATNADVPTPTSAGSTSALGQALAQVISANLRNNGLFKPVGPESLPRPGFEQV 104

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
             P F  W++  A++LV G V   G  +L V   L+DV  ++Q+    +  +PA WR+ A
Sbjct: 105 QAPDFAVWSARSAEMLVQGYVRANGDGQLTVGCYLYDVALKQQLEKAGWTVAPADWRRAA 164

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H  +D IY  ++GE   F+SR+ +++ES         L +MD DGAN RYLT S      
Sbjct: 165 HKCADMIYARLSGESPFFDSRVAYIAESGPKDRRMKRLAIMDSDGANHRYLT-SGQATAL 223

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            PRFSP+ + + Y +Y +    R+Y+ D   +   + +        APR+S +GK  L S
Sbjct: 224 TPRFSPDYKSILYLSYLNGRP-RIYVYDLAANTQ-RLVTETPGPTFAPRWSPDGKWILYS 281

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +      DIY V     A++RLT+T  I++  S+SPD S+IVFESDR G +Q+YVM ++G
Sbjct: 282 MATAGNTDIYKVPASGGASQRLTDTPGIDVGGSFSPDGSRIVFESDRSGSQQIYVMNADG 341

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           SD +RIS         P WSP+GD IAFT   G    I V+   G   R L +    +AP
Sbjct: 342 SDHRRISFFG-GRAATPEWSPRGDQIAFTHIVG-NLRIAVVSPGGGDLRYLTDSWQDEAP 399

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           TWSP+GR + F R + G   + ++ +DL GRNE  ++TP  ASDP W   +
Sbjct: 400 TWSPNGRIIQFFRTEKGSGKASVWQVDLTGRNERRLSTPGDASDPAWGPLL 450


>gi|238897410|ref|YP_002923087.1| tol protein B [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
 gi|259533857|sp|C4K8V2|TOLB_HAMD5 RecName: Full=Protein tolB; Flags: Precursor
 gi|229465165|gb|ACQ66939.1| tol protein B [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
           pisum)]
          Length = 429

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 95/431 (22%), Positives = 200/431 (46%), Gaps = 12/431 (2%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           +L+ +   + + +HA V++       +  P+++   K++   E   K+++++S DL+ S 
Sbjct: 7   MLLSLLILWTSLLHAQVRIQITQGVDSARPIAVVPFKWLGTVEPPEKIADIISSDLRNSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            FN I      +K      +     W  LG   +V G++     +   + ++L ++    
Sbjct: 67  KFNPIDPSRMPEKPFTASELIT-SSWYGLGVDAVVVGQIQAGADNHYLISYQLVELSSGT 125

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
            +   ++  +    R  AH+ SD+I+Q +TG KG F++RI +V +      +   L + D
Sbjct: 126 VLTQNQYKVTQQWLRYAAHSASDEIFQKLTGIKGAFSTRIAYVVQKNTR-QLPYELKISD 184

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG N   +  S  Q L  P +SP+ QK+AY  ++        ++      + ++I NF+
Sbjct: 185 YDGYNPFVVYRS-SQPLMSPAWSPDGQKLAYVNFESGR--SALVIQNLASGSIQKIANFQ 241

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               AP FS +G +   ++ K  +++IY +DL S    ++T++   N   S+ PDS  + 
Sbjct: 242 GHNGAPAFSPDGAKLAFALSKTGSLNIYMMDLASGNITQITDSRSNNTEPSWFPDSRYLA 301

Query: 318 FESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           + SD+ G+ Q+Y +  +G    +RI+ + + +  +   SP G  +        +  I   
Sbjct: 302 YTSDQAGRPQVYKIDISGHGVPQRITWNAKQNQ-NSAVSPDGTFLILVNSKDGQQHIAKQ 360

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPA 435
                  ++L +    + P+ +P+   +I+S  ++ ++  +L  +  +GR + L+     
Sbjct: 361 DLKTGDVQILTDTLLDETPSIAPNTTMVIYSSTQNANSVLQL--VSTDGRFKALLPEVDG 418

Query: 436 YASDPQWVGFM 446
               P W  ++
Sbjct: 419 QVKFPAWSPYL 429


>gi|304312901|ref|YP_003812499.1| TolB protein [gamma proteobacterium HdN1]
 gi|301798634|emb|CBL46866.1| TolB protein [gamma proteobacterium HdN1]
          Length = 431

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 110/437 (25%), Positives = 211/437 (48%), Gaps = 14/437 (3%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           +  + ++L        T  HA +++  +    N +P+++    + S      ++S ++S 
Sbjct: 4   RAFIKIVLFWAAFALATFAHAELRIEVSKGADNATPIAVVPFAWESGGRASDEISTIISA 63

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS +F  +++       T  D +  F+DW +LG + LV GR       +    F ++
Sbjct: 64  DLYRSGMFKPLARSDMLSWPTRADQV-FFRDWKALGMEYLVIGRWS-NAGGKYTASFEIF 121

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI-IK 190
           DV   + +  K   +S ++ R +AH  +D I++++TG KG F +R+L+V+         +
Sbjct: 122 DVLAGRTM--KSATASASNPRWLAHYTADLIFEALTGIKGAFATRLLYVTMERHGPRNQR 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L V D DG N + +  S++ I   P ++PN + + Y  +       +Y+ DT    A 
Sbjct: 180 YRLLVSDSDGYNEKVIRDSKEPI-LSPSWAPNGRHITYVAFQHSHP-GIYIQDTMTGSA- 236

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +RI +F  +  APRFS +G++  +++ KD   +IY VD ++ A +R+T+   I+  A++S
Sbjct: 237 QRITSFPGLNGAPRFSPDGQKLALTLSKDGNPEIYVVDTRTRALQRVTSHFAIDTEANWS 296

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +++ SDR G  Q+Y         +R++ D   +      +P G  +A        
Sbjct: 297 PDGGSLIYTSDRSGGPQIYRQSLATGAVERLTFDGNYNARA-SMTPDGRFLAMVHQDSGG 355

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NET 429
           F I V   +     +L +    ++P+ +P+G  +I++  + G     L  + ++GR    
Sbjct: 356 FQIAVQDLERGSFNVLTDTPLDESPSIAPNGTMVIYATLERGRG--VLGVVSIDGRVKVR 413

Query: 430 LINTPAYASDPQWVGFM 446
           L ++     +P W  FM
Sbjct: 414 LPSSVGEVREPAWSPFM 430


>gi|312171769|emb|CBX80027.1| Protein tolB precursor [Erwinia amylovora ATCC BAA-2158]
          Length = 430

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 98/445 (22%), Positives = 196/445 (44%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +++ +L +          HA V++          P+ +   K+         
Sbjct: 1   MKQAFRVALSVLMLFI-------AVAHAEVRIEITQGVNTARPIGVMPFKWDGPGAAPED 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V+ DL+ S  FN I +    Q+ T+   + +   W +LG   ++ G+V        
Sbjct: 54  IGAIVAADLRNSGKFNPIDRARLPQQPTSVAEV-QPAAWTALGIDAVIVGQVQPGADGSY 112

Query: 125 RVEFRLWDV-KDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D   +   ++ +  F     W R  AHT SD+ ++ +T  KG F +RI +V +
Sbjct: 113 AVSYQLVDTSANPGAVLAQNQFKVTKQWLRYAAHTASDESFEKLTAIKGAFRTRIAYVVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G     L V D DG N +++     Q L  P +SP+  KVAY T++        ++
Sbjct: 173 TN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKVAYVTFESGK--SALVI 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A +++ +F     AP FS +G +   ++ K  ++++Y +D+ S    ++T+  +
Sbjct: 229 QTLANGAIRQVASFPRHNGAPSFSPDGSKLAFALSKTGSLNLYVMDVGSGQIRQVTDGRY 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +   ++ PDS  + + SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  + 
Sbjct: 289 NSTEPTWFPDSQSLAYTSDQAGRPQIYKIGVNGGTAQRITWEGAQNQ-DADVSADGKSMV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +     +          + L +    + P+ +P+G  +I+S  +    GS L  + 
Sbjct: 348 MISTNSGAQHVARQDLVTGAVQKLTDTFLDETPSLAPNGTMVIYSSTQG--MGSVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W  ++
Sbjct: 406 TDGRFKARLPATDGQVKFPAWSPYL 430


>gi|262394684|ref|YP_003286538.1| TolB protein [Vibrio sp. Ex25]
 gi|262338278|gb|ACY52073.1| TolB protein precursor [Vibrio sp. Ex25]
          Length = 442

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 101/450 (22%), Positives = 191/450 (42%), Gaps = 31/450 (6%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNS-ANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDV 78
           + VL       +  A   V T+   +  P+++   K+     L   +S V++ DLQRS  
Sbjct: 1   MFVLFSSMTNVANAALELVITDGIDSARPIAVVPFKWEGTQALPTDISAVIASDLQRSGK 60

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F+ +      Q   +   +  F  W +LG   L+TG + +  +    + ++L D+   + 
Sbjct: 61  FSPVPTSKMPQTPFSESEV-NFDAWTNLGVDALLTGSIKQNAQGDYVINYQLVDIVRGQL 119

Query: 139 IIGKK---------------------FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
             GK                              R+ AH ISD +Y+ +TG++G F +RI
Sbjct: 120 TGGKSKALGSDGELVLSKDHVLFNKVATVQGPRMREYAHRISDLVYEQLTGDRGAFMTRI 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V  +         L V D DG N R +  S+ Q L  P +SP+ +K+AY ++ +    
Sbjct: 180 AYVVVN-DKDRFPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGKKLAYVSFQNGQA- 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++M+       ++I ++     APRFS +G +  I + K  ++ +Y+ DL +    ++
Sbjct: 237 EIFIMNIYTGE-REKITSYPRHNGAPRFSPDGNKLAIVLSKTGSLHVYTFDLNTRKLTQI 295

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T     N    + PD   ++F SDR GK Q+Y +        R++     +      +P 
Sbjct: 296 TRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLGSGSIDRLTWQGSQNLGGQ-ITPD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  +     S   F +     +    ++L +    ++P+ +P+G  +++S   +      
Sbjct: 355 GRFLVMVNRSNAGFNLAKQDLETGALQVLTKTLLDESPSIAPNGGMVVYSSIYNKKN--V 412

Query: 418 LYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           L  + ++GR +  L  T      P W  F+
Sbjct: 413 LSMVSIDGRFKARLPATNGRVRAPAWSPFL 442


>gi|73540499|ref|YP_295019.1| translocation protein TolB [Ralstonia eutropha JMP134]
 gi|119371052|sp|Q474K8|TOLB_RALEJ RecName: Full=Protein tolB; Flags: Precursor
 gi|72117912|gb|AAZ60175.1| TolB, N-terminal:WD40-like Beta Propeller [Ralstonia eutropha
           JMP134]
          Length = 450

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 103/416 (24%), Positives = 185/416 (44%), Gaps = 18/416 (4%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
            + V  +    S + +A   F    +    ++ ++  DL RS     +            
Sbjct: 48  QLNVEISGVGASQIPVATANFQGEAQAPQNLTAIIRSDLARSGRLRNVDPGGA---TVAE 104

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
            +      W S GA   V G V   G  +  V FRL+D    + + G  F  +    R  
Sbjct: 105 SANVDLGSWKSRGADAFVAGSVTPSGNGQYEVRFRLYDTVKGQSLGGLAFNVNQGQLRVT 164

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH I+D IY+ + GE+G F +R+ +VS        +  L + D DG N +    S + I+
Sbjct: 165 AHKIADYIYEKLLGERGVFATRLSYVSRVGG----RYQLLISDSDGQNSQVALTSNEPII 220

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+ ++VAY +++ +  + VY+ D    +    + N +    AP +S +G+   +
Sbjct: 221 -SPSWSPDGRRVAYVSFEAKKPV-VYVHDLATGK-RTLVSNQKGNNSAPSWSPDGQHLAV 277

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ +D    +Y V+   +   RLT +  I+    YSPD   I F SDR G  Q+Y M + 
Sbjct: 278 ALSRDGNTQVYQVNADGSGIRRLTRSSAIDTEPQYSPDGKSIYFTSDRGGAPQVYRMPAG 337

Query: 335 G---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           G      +R++     +   P  SP G  +A+   SG  F + +          L + SN
Sbjct: 338 GEEAGSAQRVTFKGSYNV-SPRISPDGKYLAYITRSGG-FKLQLQDLTNGDVTSLTDTSN 395

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVGFM 446
            +AP+++ +G+ ++++ +  G   S L ++  +GR   +++       +P W  FM
Sbjct: 396 DEAPSFAANGKYILYATRVGGR--SVLAAVSTDGRTRQVLSLQSGDVREPSWGPFM 449


>gi|307130109|ref|YP_003882125.1| periplasmic protein [Dickeya dadantii 3937]
 gi|32699714|sp|Q934G6|TOLB_DICD3 RecName: Full=Protein tolB; Flags: Precursor
 gi|16116637|emb|CAC82709.1| TolB protein [Erwinia chrysanthemi]
 gi|306527638|gb|ADM97568.1| periplasmic protein [Dickeya dadantii 3937]
          Length = 428

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 103/438 (23%), Positives = 193/438 (44%), Gaps = 18/438 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID-ELGGKVSEVVSK 71
           +KI L  L+      +   +HA V++       S   I    F S    +  ++  +V+ 
Sbjct: 5   LKIALSFLM-----LWTAVLHAEVRIEITQGVDSARPIGVVPFKSTGGAVPEEIGSIVAA 59

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  FN I      Q+  +   +     W +LG   ++ G+V         V ++L 
Sbjct: 60  DLRNSGKFNPIDPSRMPQQPGSAAEV-TPAAWTALGIDAVIVGQVQPTADG-YMVSYQLV 117

Query: 132 DV-KDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           D       ++ +  F     W R  AHT SD++++ +TG KG F +RI +V ++   G  
Sbjct: 118 DTSGSAGSVLAQNQFKVTKQWLRYAAHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQY 176

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L V D DG N +++     + L  P +S +  K+AY T++        ++ T  +  
Sbjct: 177 PYELRVADYDGYN-QFVVHRSPEPLMSPSWSADGSKLAYVTFESGR--SALVVQTLANGD 233

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K++ +F     AP FS +G +   ++ K  ++++Y ++L S    ++T+    N   ++
Sbjct: 234 IKQVASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMNLGSGQISQVTDGRSNNTEPTW 293

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PDS  + + SD+ G+ Q+Y +  NG   +R++ +   +  D   S  G  +     +  
Sbjct: 294 FPDSQTLAYTSDQAGRPQIYKIGINGGAPQRLTWEGSQNQ-DSEISSDGKFLVMVSSNSG 352

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE- 428
              I          ++L +    + P+ +P+G  +I+S K+    GS L  +  +GR + 
Sbjct: 353 AQHIAKQDLVTGGVQVLTDTFLDETPSIAPNGTMVIYSSKQG--LGSVLQLVSTDGRFKA 410

Query: 429 TLINTPAYASDPQWVGFM 446
            L  T      P W  +M
Sbjct: 411 RLPATDGQVRFPAWSPYM 428


>gi|83647596|ref|YP_436031.1| translocation protein TolB [Hahella chejuensis KCTC 2396]
 gi|119371045|sp|Q2SCL8|TOLB_HAHCH RecName: Full=Protein tolB; Flags: Precursor
 gi|83635639|gb|ABC31606.1| Periplasmic component of the Tol biopolymer transport system
           [Hahella chejuensis KCTC 2396]
          Length = 430

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 102/439 (23%), Positives = 218/439 (49%), Gaps = 14/439 (3%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID--ELGGKVSEV 68
           +  +I   L+L++ G        A + +  +  + + + +A   F +     L   + ++
Sbjct: 1   MKKQIFFTLILLISGL-----ARADLVIEIDKGSRAAIPVAVVPFANESGQPLAEDIGQI 55

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR-LRVE 127
            ++DL+RS     + +       +  + I  F+DW  LG + L+ G V  +   +  +V 
Sbjct: 56  FTEDLKRSGDIEPLDRTKMVSIPSKAEEI-YFRDWGLLGQRYLLVGGVQYDAPSQVYKVR 114

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           + L++V+ ++++IGK         R + H I+D +Y+++TG +G F++RI +V+      
Sbjct: 115 YELYNVQSQQRVIGKIISGKSEKLRDMGHAIADAVYEAVTGIRGVFSTRIAYVTLEKSGA 174

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L V D DG     L   R   +  P +SP+ +K+AY +++ +    +Y+ D    
Sbjct: 175 KNIYRLEVADADGRRSTELLK-RSMPIISPAWSPDGKKLAYVSFESQRPA-IYVQDVDTG 232

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              + + +F+ +  AP +S +G +  +++ KD   ++Y +DL++N+ +RLTN   I+  A
Sbjct: 233 TRTQ-VTSFKGLNSAPTWSPDGTKLAVTLSKDGNAELYVLDLRNNSLKRLTNHWAIDTEA 291

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SPD   I F SDR G  Q+Y++ ++G   +R++ +   +   P +S  G  + +    
Sbjct: 292 SWSPDGRTIAFTSDRGGGPQIYLVDASGGSPRRLTFEGRYN-SRPRFSVDGKKVYYVHQR 350

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F +  +  +  Q+++L +    ++P+ +P+G  +I++ +K+G     +  ++ +G  
Sbjct: 351 DGSFNVASLDLESGQDQILTQTEMDESPSVAPNGSMIIYATQKNGKGVLAVVGVN-SGSK 409

Query: 428 ETLINTPAYASDPQWVGFM 446
            TL        +P W  ++
Sbjct: 410 YTLPAQFGDVREPAWSPYI 428


>gi|254787335|ref|YP_003074764.1| translocation protein TolB [Teredinibacter turnerae T7901]
 gi|237684356|gb|ACR11620.1| Tol-Pal system beta propeller repeat protein TolB [Teredinibacter
           turnerae T7901]
          Length = 431

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 103/431 (23%), Positives = 199/431 (46%), Gaps = 9/431 (2%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDV 78
           ++L+ +      S  A + +       +P  IA   F    +L   + ++VS DL RS  
Sbjct: 5   MVLIPLLLLLSLSTRAELMIEITQGMDNPTPIAIVPFSGSGDLPENIQQIVSSDLLRSGF 64

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG---KDRLRVEFRLWDVKD 135
           F  ++        +    I  ++DW  LG + LV G+V +      D   V+F+L+DV  
Sbjct: 65  FRPLAPSDMLSLPSRQQDI-FYRDWRILGVEYLVIGQVREAAVGAADDYIVDFQLYDVLG 123

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           ++ ++ K    S A  R IAH ISD +YQ++TG +G F+++IL++ +    G  +  L  
Sbjct: 124 QRNVMQKTITGSVAELRDIAHEISDVLYQTLTGIRGAFSTKILYIEDLRREGAGRYRLVK 183

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DGA  + L  + +  L  P +S +  +VAY +++      ++  +       +++ N
Sbjct: 184 ADADGAREKVLFTTSEP-LLSPTWSNDMTQVAYVSFETGRPA-IFRQNLLTG-VREQLTN 240

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F+ +  AP +S +  +  + + KD   ++Y++D+ S    R+TN   I+   +++ D   
Sbjct: 241 FKGLNGAPAWSPDDSKLAMVLSKDGNPELYTLDIASKKLTRVTNHFAIDTEPNWTADGKG 300

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           ++F S+R G  Q+Y +       +R++ + + +   P  +P G  +         F I  
Sbjct: 301 LIFTSNRGGNPQIYQVGLETGRVERLTFEGDYNAR-PRVTPDGKSLVMVHRYKGVFHIAW 359

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                   R+L E    ++P+ +P+G  L+++ K +        S+D  G    L +   
Sbjct: 360 QDIASGDMRILTETWLDESPSIAPNGAMLLYATKYNDKGVLAAVSMDA-GVKFRLPSKQG 418

Query: 436 YASDPQWVGFM 446
              +P W  F+
Sbjct: 419 DVREPAWSPFV 429


>gi|237748799|ref|ZP_04579279.1| TolB [Oxalobacter formigenes OXCC13]
 gi|229380161|gb|EEO30252.1| TolB [Oxalobacter formigenes OXCC13]
          Length = 423

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 105/420 (25%), Positives = 199/420 (47%), Gaps = 17/420 (4%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSF 87
                   + +         + I    F +      KV+ ++  DL R+ +F LI  D+ 
Sbjct: 19  AQAVGQEVLNIDIAGVGNKQIPIVIAGFSNEATAPEKVTNIIKADLARTGMFRLIGTDAI 78

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
                   +   ++ W + GA  LV G ++K    ++ V +RL+D+    Q+      + 
Sbjct: 79  I----GESADIDYRKWRAQGADALVVGTLVKSPDGKIDVRYRLFDLGKSSQLSALSMLAP 134

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
            +  R  AH I+DDIY+ +TG KG F + I +V+++      +  L + D DG N     
Sbjct: 135 ASMTRVTAHKIADDIYEKLTGHKGIFATCIAYVTKTGN----EYRLEIADADGGNKLVAL 190

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            S++ I+  P +SP+  +VAY +++ +  + VY+ +  + R    + N++    AP +S 
Sbjct: 191 RSKEPII-SPSWSPDGTRVAYVSFEAKKPV-VYVQNL-VTRQRTMVANYKGNNSAPSWSP 247

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G R  +++ KD    +Y+V     A +++T T  IN    +SPD   I F SDR G  Q
Sbjct: 248 DGSRLAVALSKDGYTQVYTVSANGGALKQITQTRSINTEPQFSPDGQWIYFTSDRSGGPQ 307

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y +  NG + +R++     +   P  SP G  +A+    G  + + ++     QE+ L 
Sbjct: 308 IYKVGVNGGNPQRVTFHGNYN-ISPRVSPDGKSLAYISRRGG-YQLYLLDLTNGQEQRLS 365

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVGFM 446
           + S  ++P++SP+G+ ++++          L  + ++GR +  ++  A    +P W  FM
Sbjct: 366 DTSRDESPSFSPNGQFIMYATN---GGRGALSVVSVDGRVKQRLSMKASDVREPSWGPFM 422


>gi|289661909|ref|ZP_06483490.1| translocation protein TolB [Xanthomonas campestris pv. vasculorum
           NCPPB702]
 gi|289667000|ref|ZP_06488075.1| translocation protein TolB [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 439

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 118/442 (26%), Positives = 215/442 (48%), Gaps = 16/442 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAF-----VKVATNSANYSPVSIAFTKFVSIDELGG-KVS 66
           M   L  L+ L     P S  +      + +   SA+ +P+++    +          VS
Sbjct: 1   MNKPLRWLVALTALLLPLSAFSQQQGLTIDIVGGSASATPIAVIPMPYQGSGTAPQTDVS 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F  +      +K T    + +FQ W +L    +V GRV+  G    RV
Sbjct: 61  AVVGADLDRSGQFRTLPAAQIVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMDAGDGAYRV 119

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E+ L+DV   ++++G    +   + R ++H ++D IY+ ITG +G F +RI +V+ S   
Sbjct: 120 EYELFDVAKGERMLGLAMTARANAMRDVSHQMADAIYEKITGVRGAFWTRIAYVTASGKG 179

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G ++ +L V D DG N + +  S +  L  P +SP+ +K+AY +++  +   +YL D   
Sbjct: 180 GAMRYALMVADSDGYNPQTIVRSAEP-LLSPNWSPDGKKLAYVSFERGNS-SIYLQDIAT 237

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             A + + +FR +  AP FS +G+R  +++ +    +IY +DL S    +LTN   I+  
Sbjct: 238 G-ARELVSSFRGINGAPSFSPDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGIDTE 296

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +++PD   I F SDR G+ Q+Y + ++G    R++     +    V S  G  IA  + 
Sbjct: 297 PTWAPDGGSIYFTSDRGGRPQIYQVSASGGSANRVTFQGNYNATASV-SFDGKKIAVAQG 355

Query: 367 SGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           SG  + I +M +         L   S  ++P+++P+   ++++ ++ G     LY++  +
Sbjct: 356 SGNSYRIAMMDRSLGSPSWSTLSPGSLDESPSFAPNASMVLYAAREGGRG--VLYAVSSD 413

Query: 425 GR-NETLINTPAYASDPQWVGF 445
            R  + L+       +P W  +
Sbjct: 414 ARVRQRLVLADGDVREPAWGPY 435


>gi|119944498|ref|YP_942178.1| TolB domain-containing protein [Psychromonas ingrahamii 37]
 gi|119863102|gb|ABM02579.1| TolB, N-terminal domain protein [Psychromonas ingrahamii 37]
          Length = 437

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 106/444 (23%), Positives = 198/444 (44%), Gaps = 18/444 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M + L L + +I      S    + +        P+++   K++   E  G  SE+++ D
Sbjct: 1   MLLRLFLSISMIILSSQASARLEILITEGVNTARPIAVIPFKWLGDGEKPGNFSEIIAAD 60

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK-DRLRVEFRLW 131
           LQRS  F+ +  +      +    +  +  W+ +G + L+ G V    +  +  V + L 
Sbjct: 61  LQRSGQFSPLPIEQMPNTPSKSLGL-DYALWHKMGIEALLMGEVSPSPEAGKYIVTYELV 119

Query: 132 DVKDRKQ--------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           DV             +  ++   +    R+ AH ISD  Y+ +TGEKG F +RI +++  
Sbjct: 120 DVVAGNANIADYSPILESRRGTVNKTQLRRFAHRISDVAYEKLTGEKGVFLTRIAYIAVD 179

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             S      L + D DG N + +  S+  I   P +SP+ +K+AY +++      VY+ D
Sbjct: 180 RKSD-YPYQLRISDYDGYNEKLILRSKQPI-MSPTWSPDGRKLAYVSFEHRRS-EVYIQD 236

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +  + + +F  +  +P +S +GK   I + KD   +IY++++QS A  R+TN   I
Sbjct: 237 L-YSQKRELMTSFPKINGSPSWSPDGKSLAIVLSKDGQPEIYTLEIQSKALRRITNNRAI 295

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +   ++SPD + + F S R G  Q+Y +       KR++ + + +      +P G  +  
Sbjct: 296 DTEPNWSPDGNSLTFTSTRGGGPQIYQVDLQSKVTKRLTWEGDLNLGG-AITPDGANLVL 354

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  + I        + R L +    ++P+ +P+G  +I+S    G  G  L S+D 
Sbjct: 355 VSRLDGNYKIAAQDLASGELRTLTKTHLDESPSVAPNGSMIIYSTVYKGSQGLALVSMD- 413

Query: 424 NGRNE-TLINTPAYASDPQWVGFM 446
            GR +  +         P W  F+
Sbjct: 414 -GRFKANIPAQSGEVKSPAWSPFL 436


>gi|91781923|ref|YP_557129.1| translocation protein TolB [Burkholderia xenovorans LB400]
 gi|118574575|sp|Q145B2|TOLB_BURXL RecName: Full=Protein tolB; Flags: Precursor
 gi|91685877|gb|ABE29077.1| Putative periplasmic TolB protein [Burkholderia xenovorans LB400]
          Length = 430

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 102/444 (22%), Positives = 201/444 (45%), Gaps = 21/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L ++  +   L+ +GG    + +A + V       +   IA   F +      +VS
Sbjct: 3   LMTKLGLRTLVASCLIAVGG----AANAQLNVLVTGVGSTQFPIATANFANEANSPQQVS 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V +DLQRS  F  I   +      +         W + GA   V+G V +    +  V
Sbjct: 59  TIVRQDLQRSGKFTNIDAGA---TPVSETDSVDLGSWKAKGANAFVSGSVNRLPNGQYEV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F+L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V ++   
Sbjct: 116 RFKLYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRGVFATRLSYVIKTGG- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG +      S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQDAHIALSSPEPII-SPAWSPDGTKVAYVSFEKKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G+   +++ +     I++V+   +   RLT    I+  
Sbjct: 230 GRRI-VVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +SPD   I F SDR G+ Q+Y M + G      +R++     +   P  SP G  +A+
Sbjct: 289 PCFSPDGQSIYFTSDRGGQPQIYKMSAQGENAGAAQRVTFTGSYN-TSPRVSPDGKQLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G  F + +    G+    L + ++ ++P+++ +G+ ++++ + +G     L ++  
Sbjct: 348 ISRVGGGFKLYIQDLQGNTATGLTDTTHDESPSFAANGQYILYATQVNGRG--VLAAVST 405

Query: 424 NGRNETLIN-TPAYASDPQWVGFM 446
           +GR   +++       +P W  FM
Sbjct: 406 DGRTRQVLSVQGGSVREPSWGPFM 429


>gi|319793386|ref|YP_004155026.1| toL-pal system beta propeller repeat protein tolb [Variovorax
           paradoxus EPS]
 gi|315595849|gb|ADU36915.1| Tol-Pal system beta propeller repeat protein TolB [Variovorax
           paradoxus EPS]
          Length = 408

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 107/416 (25%), Positives = 191/416 (45%), Gaps = 14/416 (3%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
              A  +V  +    + + IA   F   D    K+S++V  DL+RS  F  +       +
Sbjct: 3   PALAQFRVEVSGVGLTQLPIALVPFKGQDSSPQKISDIVQADLERSGQFRGVDASG---Q 59

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
             +  S P    W    A  LV G V +    R  V+FRLWDV   + + G+ +      
Sbjct: 60  ALDEASRPDLSLWRQRTADSLVVGSVTRLADGRFDVKFRLWDVVKGQDLGGQSYTVPQGD 119

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R  +H I+D +Y+ +TGEKG F++RI +V+     G  + SL V D DG N +    S 
Sbjct: 120 LRLASHRIADFVYEKLTGEKGIFSTRIAYVT----KGGSRYSLWVADADGENAQAALASP 175

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           + I+  P +S N Q++AY +++    + VY+ +    +  + + NF+    AP ++ +G 
Sbjct: 176 EPII-SPCWSSNGQQLAYVSFESRKPV-VYVHNVASGQ-RRLLANFKGSNSAPAWAPDGN 232

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
              +++ +D    +Y++        RLT +  I+    YS D S I F SDR G  Q+Y 
Sbjct: 233 SLAVTLSRDGGSQLYTIPASGGEPRRLTQSASIDTEPVYSADGSTIYFVSDRGGAPQIYK 292

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M ++G +  R++     +   P  S  G  +A+    G  F + VM+        + + +
Sbjct: 293 MGASGGNPTRVTFSGTYN-ISPSVSGDGRWLAYISRIGGAFKLQVMELATGNVASITDTN 351

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
             ++P+++P+ + ++++    G     L +  L+G+    L        +P W  F
Sbjct: 352 ADESPSFAPNSKLIVYATHLQGR--EALMTTTLDGKIKARLAGQAGDIREPDWGPF 405



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 15/178 (8%)

Query: 141 GKKFFSSPAS---WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           G + ++ PAS    R++  + S D     + +     S I FVS+   +      +  M 
Sbjct: 243 GSQLYTIPASGGEPRRLTQSASIDTEPVYSADG----STIYFVSDRGGAP----QIYKMG 294

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             G N   +T S       P  S + + +AY +       ++ +M+              
Sbjct: 295 ASGGNPTRVTFSG-TYNISPSVSGDGRWLAYIS-RIGGAFKLQVMELATGNVASI--TDT 350

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           +   +P F+ N K  + +        + +  L      RL           + P   Q
Sbjct: 351 NADESPSFAPNSKLIVYATHLQGREALMTTTLDGKIKARLAGQAGDIREPDWGPFQKQ 408


>gi|320539139|ref|ZP_08038810.1| periplasmic protein [Serratia symbiotica str. Tucson]
 gi|320030777|gb|EFW12785.1| periplasmic protein [Serratia symbiotica str. Tucson]
          Length = 430

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 93/445 (20%), Positives = 189/445 (42%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +   +L       + + +HA V++       +  P+++   K+         
Sbjct: 1   MKQAFRVALGFLIL-------WASVLHAEVRIEITQGVDSARPIAVVPFKWAGSGTPPED 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           + ++V  DL+ S  F  I      Q+ T    +     W +LG   +V G+V        
Sbjct: 54  IGKIVGADLRNSGKFTPIDVARMPQQPTTASEV-TPAAWTALGIDAVVVGQVQPGADGSY 112

Query: 125 RVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            + ++L D        +   +F  +    R  AHT SD++++ + G KG F +RI ++ +
Sbjct: 113 LISYQLVDTSGSPGSVLAQNQFKVTQQWLRYSAHTASDEVFEKLIGTKGAFRTRIAYIVQ 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +   G     L V D DG N +++     + L  P +SP+  K+AY T++        ++
Sbjct: 173 TN-GGKFPYELRVADYDGYN-QFVVHRSPEPLMSPAWSPDGSKLAYVTFESGR--SALVV 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T  + A  +I  F     AP FS +G R   ++ K  ++++Y ++L S    ++T+   
Sbjct: 229 QTLANGAISQIAAFPRHNGAPAFSPDGSRLAFALSKSGSLNLYVMNLGSGQMTQITDGRS 288

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N   ++ PD   + + SD+ G+ Q+Y + ++G   +R++ +   +    + S  G  + 
Sbjct: 289 NNTEPAWFPDGQTLAYTSDQGGRPQIYKISASGGASQRLTWEGSQNQNA-MVSSDGKFLV 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +     I          ++L      + P+ +P+G  +I+S  +    GS L  + 
Sbjct: 348 MVSSNNGVQHIAKQDLGSGAVQVLTGTLLDETPSIAPNGTMVIYSSMQG--IGSVLQLVS 405

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
            +GR +  L  T      P W   +
Sbjct: 406 TDGRFKARLPATDGQVKSPAWSPHL 430


>gi|87199039|ref|YP_496296.1| translocation protein TolB [Novosphingobium aromaticivorans DSM
           12444]
 gi|119371032|sp|Q2G9L1|TOLB2_NOVAD RecName: Full=Protein tolB 2; Flags: Precursor
 gi|87134720|gb|ABD25462.1| TolB-like protein [Novosphingobium aromaticivorans DSM 12444]
          Length = 461

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 141/411 (34%), Positives = 213/411 (51%), Gaps = 17/411 (4%)

Query: 48  VSIAFTKF------------VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           + IA   F             + + LG  V+ VV  DL+ + +F  +  D+         
Sbjct: 55  LGIAIPSFPTNASVPTAAEGGTTEALGRNVARVVFNDLKNNGLFKPVGPDALPAIAFPQV 114

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
           + P F  W    A++LV G V      RL V   L+DV    ++  + +   P  WR+ A
Sbjct: 115 AAPAFDAWRGRSAEMLVQGFVKANEDGRLTVGCYLYDVALGSELARQGYVVKPEEWRRAA 174

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H  +D +Y  ++GE   F+S+I +++E+      +  L +MD DGAN R++T  +     
Sbjct: 175 HKCADMVYSRLSGESPFFDSKIAYIAETGPKDRRRKQLAIMDSDGANHRFITNGQ-ATAL 233

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            PR+SP+  ++ Y +Y +    R+Y+ +    +  K + +  +   APR+S +GK  L S
Sbjct: 234 TPRYSPDYSQIVYLSYLNG-APRIYIYNIGTGQQ-KLVTSSTNPTFAPRWSPDGKWILYS 291

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +      DIY V +   A+ RLT++  I++  SYSPD S+IVFESDR G +QLYVM ++G
Sbjct: 292 MSVAGNTDIYRVSVNGGASTRLTDSPGIDVGGSYSPDGSRIVFESDRSGSQQLYVMNADG 351

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           S+QKRIS         P WSP+GD IAFT   G  F I V    G   R L +    +AP
Sbjct: 352 SNQKRISFFG-GRAATPEWSPRGDQIAFTHL-GGNFRIAVTDPSGGNMRFLTDSWQDEAP 409

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           TWSP+GR + F R + G   + ++ +DL GRNE  +NTP   SDP W   +
Sbjct: 410 TWSPNGRIVQFFRTERGSGKTGIWQVDLTGRNERKLNTPVDGSDPAWGPVL 460


>gi|194290407|ref|YP_002006314.1| translocation protein tolb [Cupriavidus taiwanensis LMG 19424]
 gi|193224242|emb|CAQ70251.1| colicin transporter component [Cupriavidus taiwanensis LMG 19424]
          Length = 457

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 100/418 (23%), Positives = 188/418 (44%), Gaps = 18/418 (4%)

Query: 33  HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
           HA + V  +    S   +A   F    +    ++ ++  DL RS  F  +          
Sbjct: 53  HAQLNVEISGVGSSQFPVATANFQGEAQAPQNLTAIIRSDLARSGRFRNVDPGGA---TV 109

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
              +      W + GA   V G V      +  V FRL+D    + + G  F  + +  R
Sbjct: 110 AESANVDLGSWKARGADAFVAGSVTPAAGGKYEVRFRLYDTVKGQSLGGLAFTVNQSQLR 169

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
             AH I+D IY+ + GE+G F +R+ +VS+       +  L + D DG N +    S + 
Sbjct: 170 VTAHKIADYIYEKLLGERGVFATRLSYVSKVGG----RYQLLISDSDGQNAQVALTSNEP 225

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           I+  P +SP+  +VAY +++ +  + VY+ D    +    + N +    AP +S +G+  
Sbjct: 226 II-SPSWSPDGARVAYVSFEAKKPV-VYVHDLASGK-RTLVSNQKGNNSAPSWSPDGRHL 282

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +++ +D    +Y V+   +   RL+ +  I+    YSPD   I F SDR G  Q+Y M 
Sbjct: 283 ALALSRDGNTQVYQVNADGSGIRRLSRSSAIDTEPQYSPDGKSIYFTSDRGGAPQIYRMP 342

Query: 333 SN---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++   G   +R++     +   P  SP G  +A+   +G  F + +          L + 
Sbjct: 343 ASGEEGGGAQRVTFKGSYNV-SPRISPDGKYLAYISRAGG-FKLQLQDLTNGDVTSLTDT 400

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVGFM 446
           +N +AP+++ +G+ ++++ +  G   + L ++  +GR   +++       +P W  FM
Sbjct: 401 ANDEAPSFAANGKYILYATRVGGR--AVLAAVSTDGRTRQVLSLQSGDVREPSWGPFM 456


>gi|296162180|ref|ZP_06844976.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           Ch1-1]
 gi|295887566|gb|EFG67388.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           Ch1-1]
          Length = 430

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 103/444 (23%), Positives = 201/444 (45%), Gaps = 21/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L ++  +   L+ +GG    + +A + V       +   IA   F +      +VS
Sbjct: 3   LMTKLGLRTLVASCLIAVGG----AANAQLNVLVTGVGSTQFPIATANFANEANSPQQVS 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V +DLQRS  F  I   S      +         W + GA   V+G V +    +  V
Sbjct: 59  TIVRQDLQRSGKFTNIDAGS---TPVSETDSVDLGSWKAKGANAFVSGSVNRLPNGQYEV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F+L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V ++   
Sbjct: 116 RFKLYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRGVFATRLSYVIKTGG- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG +      S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQDAHIALSSPEPII-SPAWSPDGTKVAYVSFEKKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G+   +++ +     I++V+   +   RLT    I+  
Sbjct: 230 GRRI-VVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +SPD   I F SDR G+ Q+Y M + G      +R++     +   P  SP G  +A+
Sbjct: 289 PCFSPDGQSIYFTSDRGGQPQIYKMSAQGENAGAAQRVTFTGSYN-TSPRVSPDGKQLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G  F + +    G+    L + ++ ++P+++ +G+ ++++ + +G     L ++  
Sbjct: 348 ISRVGGGFKLYIQDLQGNTATGLTDTTHDESPSFAANGQYILYATQVNGRG--VLAAVST 405

Query: 424 NGRNETLIN-TPAYASDPQWVGFM 446
           +GR   +++       +P W  FM
Sbjct: 406 DGRTRQVLSVQGGSVREPSWGPFM 429


>gi|307728551|ref|YP_003905775.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Burkholderia sp. CCGE1003]
 gi|307583086|gb|ADN56484.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           CCGE1003]
          Length = 430

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 104/444 (23%), Positives = 200/444 (45%), Gaps = 21/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L ++  +   L+ +GG    + +A + V       +   IA   F +      +VS
Sbjct: 3   LMTKLGLRTLVASCLIAVGG----AANAQLNVLVTGVGSTQFPIATANFANEANSPQQVS 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V +DLQRS  F  I   S     T          W + GA   V G V +    +  V
Sbjct: 59  TIVRQDLQRSGKFTNIDAGSAPVPETAS---VDLGSWKAKGANAFVAGSVNRLPNGQYEV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F+L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V ++   
Sbjct: 116 RFKLYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG +      S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQDAHIALSSPEPII-SPAWSPDGTKVAYVSFEKKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G+   +++ +     I++V+   +   RLT    I+  
Sbjct: 230 GRRI-VVADQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
            ++SPD   I F SDR G+ Q+Y M + G      +R++     +   P  SP G  +A+
Sbjct: 289 PTFSPDGQTIYFTSDRGGQPQIYKMSAQGESAGAAQRVTFTGSYN-TSPRVSPDGKQLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G  F + +    G     L + ++ ++P+++ +G+ ++++ + +G     L ++  
Sbjct: 348 ISRVGGGFKLYIQDLQGGTATGLTDTTHDESPSFAANGQYILYATQVNGRG--VLAAVST 405

Query: 424 NGRNETLIN-TPAYASDPQWVGFM 446
           +GR   +++       +P W  FM
Sbjct: 406 DGRTRQVLSVQGGSVREPSWGPFM 429


>gi|77460623|ref|YP_350130.1| translocation protein TolB [Pseudomonas fluorescens Pf0-1]
 gi|77384626|gb|ABA76139.1| TolB colicin import protein [Pseudomonas fluorescens Pf0-1]
          Length = 414

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 106/416 (25%), Positives = 203/416 (48%), Gaps = 12/416 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           + V + S   +P+++    F     L   ++E++  DL+ S  ++ I + +   + + P 
Sbjct: 7   ILVTSGSDRATPIAVVPFGFQGGAVLPDDMAEIIGNDLRNSGYYSPIPKQNMISQPSQPS 66

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
            I  F+DW ++GAQ ++ G ++  G  RL+V++ L++V   +++       +    R +A
Sbjct: 67  EII-FRDWKAVGAQYMMVGSIVPAG-GRLQVQWALFNVATEQKVADGSVSGTTEQLRDMA 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVS-GIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           H ISD  ++ +TG KG F++R+L+V+    S    + +L   D DGA    L  SR+ I 
Sbjct: 125 HYISDQSFEKLTGIKGAFSTRLLYVTAERFSEKNTRYTLQRSDYDGARAVTLLQSREPI- 183

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             PRF+P+ +++AY +++ +   R+++ +    R  ++I NF  +  AP +S +G R   
Sbjct: 184 LSPRFAPDGKRIAYVSFEQKRP-RIFMQNIDTGR-REQITNFEGLNGAPAWSPDGNRLAF 241

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + KD   DIY ++L S    R+T    IN    +  D S I F SDR GK Q+Y   + 
Sbjct: 242 VLSKDGNPDIYVMNLGSRQITRVTAGPGINTEPYWGKDGSTIYFTSDRGGKPQIYKTSAG 301

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNL 392
           G   +R++     +  +P  S     +           F +          ++L + +  
Sbjct: 302 GGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDGFTNFKVAAQDLQRGSVKILTDSTLD 360

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFMD 447
           ++PT +P+G  +I++ ++ G     L  + +NGR    + T      +P W  +++
Sbjct: 361 ESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRVRLPLPTAQGEVREPSWSPYLN 414


>gi|56460188|ref|YP_155469.1| translocation protein TolB [Idiomarina loihiensis L2TR]
 gi|67461918|sp|Q5QYU0|TOLB_IDILO RecName: Full=Protein tolB; Flags: Precursor
 gi|56179198|gb|AAV81920.1| Periplasmic component of the Tol biopolymer transport system
           [Idiomarina loihiensis L2TR]
          Length = 449

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 105/457 (22%), Positives = 205/457 (44%), Gaps = 31/457 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           MK  L   ++L            +++          P+++   ++    +   ++++V++
Sbjct: 1   MKNILIRSILLFVALTAFVRAGVLEIVITEGIDTARPIAVVPFQWKGEGKAPNELTDVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  FN I   +  Q+    D I  +  W  +G + ++ G +     DR  V+F +
Sbjct: 61  ADLMRSGKFNPIPVSAMPQRPAADDEI-DYSAWAKMGVEAILVGSIEPYSVDRYMVKFEV 119

Query: 131 WDVKDRK--------------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
            DV   +                     +  +        +R  AH ISD  Y+++TGE+
Sbjct: 120 IDVLRGQITGGNSQMLRNGELVQSNDHVLDSRSSVIDGDQFRSYAHRISDVAYEALTGER 179

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F ++I +V+ +         L V D DGAN + L  S +  L  P +SP+  K+AY +
Sbjct: 180 GAFMTKIAYVTVN-HDDRYPYKLAVADYDGANEKILLRSPEP-LMSPAWSPDGNKLAYVS 237

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           ++++    +++ D    R  +++ +F  +   P FS +GK+  + + KD   ++Y  D++
Sbjct: 238 FENK-TAEIFMQDIYTTR-REKLTSFPGINGNPVFSPDGKKLAMVLSKDGNPELYVFDIK 295

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +   +R+T    I+   +++PD   +VF S+R G+ QLY +  +    +R++ D E +  
Sbjct: 296 TKDLQRVTRNRTIDTEPNWTPDGESLVFTSERGGRPQLYSVNLSSGQVRRLTFDGEQNLG 355

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
             +  P G+ +     +   + I   +      ++L + S  ++P+ +P+G  +I+S   
Sbjct: 356 GTLV-PSGEDMILVNRTRGNYHIAKQEFPRGNMQVLTKTSLDESPSVAPNGSMVIYSTTH 414

Query: 411 DGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           +      L SID  GR +  L  T      P W  FM
Sbjct: 415 NNKQVLALVSID--GRFKARLPATDGEIKSPAWSPFM 449


>gi|170691331|ref|ZP_02882496.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           graminis C4D1M]
 gi|170143536|gb|EDT11699.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           graminis C4D1M]
          Length = 430

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 199/444 (44%), Gaps = 21/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L ++  +   L+  GG    + +A + V       +   IA   F +      +VS
Sbjct: 3   LMTKLGLRTLVASCLIAAGG----AANAQLNVLVTGVGSTQFPIATANFANEANSPQQVS 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V +DLQRS  F  I   S     T          W + GA   V G V +    +  V
Sbjct: 59  TIVRQDLQRSGKFTNIDAGSAPVPETAS---VDLGSWKAKGANAFVAGSVNRLPNGQYEV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F+L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V +S   
Sbjct: 116 RFKLYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRGAFATRLSYVIKSGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG +      S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQDAHIALSSPEPII-SPAWSPDGTKVAYVSFEKKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G+   +++ +     I++V+   +   RLT    I+  
Sbjct: 230 GRRI-VVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGSGLRRLTQGSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
            ++SPD   I F SDR G+ Q+Y M + G      +R++     +   P  SP G  +A+
Sbjct: 289 PTFSPDGQSIYFTSDRGGQPQIYKMSAQGESAGGAQRVTFTGSYN-TSPRVSPDGKQLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G  F + +    G     L + ++ ++P+++ +G+ ++++ + +G     L ++  
Sbjct: 348 ISRVGGGFKLYIQDLQGGTATGLTDTTHDESPSFAANGQYILYATQVNGRG--VLAAVST 405

Query: 424 NGRNETLIN-TPAYASDPQWVGFM 446
           +GR   +++       +P W  FM
Sbjct: 406 DGRTRQVLSVQGGSVREPSWGPFM 429


>gi|323524838|ref|YP_004226991.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Burkholderia sp. CCGE1001]
 gi|323381840|gb|ADX53931.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia sp.
           CCGE1001]
          Length = 430

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 104/444 (23%), Positives = 199/444 (44%), Gaps = 21/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L ++  +   L+ +GG    + +A + V       +   IA   F +      +VS
Sbjct: 3   LMTKLGLRTLVASCLIAVGG----AANAQLNVLVTGVGSTQFPIATANFANEANSPQQVS 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V +DLQRS  F  I   S     T          W + GA   V G V +    +  V
Sbjct: 59  TIVRQDLQRSGKFTNIDAGSAPVPETAS---VDLGSWKAKGANAFVAGSVNRLPNGQYEV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F+L+D    + + G    S  +  R  AH ++D IY  + G +G F +R+ +V ++   
Sbjct: 116 RFKLYDTVKGESLGGLVLVSPESGLRMSAHKVADYIYAKLMGGRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG +      S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQDAHIALSSPEPII-SPAWSPDGTKVAYVSFEKKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G+   +++ +     I++V+       RLT    I+  
Sbjct: 230 GRRI-VVSDQKGNNSAPAWSPDGRTLAVALSRTGNTQIFAVNADGTGLRRLTQGSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
            ++SPD   I F SDR G+ Q+Y M + G      +R++     +   P  SP G  +A+
Sbjct: 289 PTFSPDGQTIYFTSDRGGQPQIYKMSAQGESAGAAQRVTFTGSYN-TSPRVSPDGKQLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G  F + +    G     L + ++ ++P+++ +G+ ++++ + +G     L ++  
Sbjct: 348 ISRVGGAFKLYIQDLQGGTATGLTDTTHDESPSFAANGQYILYATQVNGRG--VLAAVST 405

Query: 424 NGRNETLIN-TPAYASDPQWVGFM 446
           +GR   +++       +P W  FM
Sbjct: 406 DGRTRQVLSVQGGSVREPSWGPFM 429


>gi|222111173|ref|YP_002553437.1| translocation protein tolb [Acidovorax ebreus TPSY]
 gi|221730617|gb|ACM33437.1| Tol-Pal system beta propeller repeat protein TolB [Acidovorax
           ebreus TPSY]
          Length = 440

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 106/414 (25%), Positives = 192/414 (46%), Gaps = 14/414 (3%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
             +V       + + IA   F    +   K+S +V  DL+RS  F  +          + 
Sbjct: 39  QFRVEITGVGLTQLPIAIAPFRGEPQSPQKISAIVQADLERSGRFLGVDASGV---ALDE 95

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
            S P    W    A  L +G + +    R  V FRLWDV   + + G+ F  + A  R +
Sbjct: 96  SSRPDLSLWRQRKADALTSGSITRLADGRFDVRFRLWDVVKAQDLGGQSFVVTQADLRLV 155

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH I+D +Y+ +TGE+G F++RI +V+++      + SL V D DG N +    S + I+
Sbjct: 156 AHRIADFVYEKLTGERGIFSTRIAYVTKAGS----RYSLWVADADGENAQSALSSPEPII 211

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P ++P   ++AY +++    + VY+ D    R  + I NFR    AP +S +G+   +
Sbjct: 212 -SPAWAPTGTQLAYVSFESRKPV-VYVHDVATGR-RRLIANFRGSNSAPAWSPDGRTLAV 268

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ +D    +Y++D       RL  +  I+    +S D   I F SDR G  Q+Y + ++
Sbjct: 269 TLSRDGGSQLYTIDANGGEPRRLMQSSGIDTEPVFSSDGRSIYFVSDRGGSPQVYRVAAS 328

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G   +R++ +   +   P  SP G  +A+    G  + + VM         + + S  + 
Sbjct: 329 GGGAERVTFNGSYN-ISPSISPDGQWLAYISRVGGAYKLHVMDFKSGSVTAVTDTSADEN 387

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFMD 447
           P+++P+ R ++++ ++ G     L +  L+G+    L        +P W  F +
Sbjct: 388 PSFAPNSRLIVYATQQQGR--EALMTTTLDGKIKARLAGQGGDIREPDWGPFQN 439


>gi|91227604|ref|ZP_01261908.1| translocation protein TolB precursor [Vibrio alginolyticus 12G01]
 gi|91188497|gb|EAS74790.1| translocation protein TolB precursor [Vibrio alginolyticus 12G01]
          Length = 442

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 102/450 (22%), Positives = 191/450 (42%), Gaps = 31/450 (6%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNS-ANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDV 78
           + VL       +  A   V T+   +  P+++   K+     L   VS V++ DLQRS  
Sbjct: 1   MFVLFSSMTNVANAALELVITDGIDSARPIAVVPFKWEGTQALPTDVSAVIASDLQRSGK 60

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F+ +      Q   +   +  F  W +LG   L+TG + +  +    + ++L D+   + 
Sbjct: 61  FSPVPTSKMPQTPFSESEV-NFDAWTNLGVDALLTGSIKQNDQGDYVINYQLVDIVRGQL 119

Query: 139 IIGKK---------------------FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
             GK                              R+ AH ISD +Y+ +TG++G F +RI
Sbjct: 120 TGGKSKALGSDGELVLSKDHVLFNKVATVQGPRMREYAHRISDLVYEQLTGDRGAFMTRI 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V  +         L V D DG N R +  S+ Q L  P +SP+ +K+AY ++ +    
Sbjct: 180 AYVVVN-DKDRFPYQLRVADYDGYNERLVLRSK-QPLMSPAWSPDGKKLAYVSFQNGQA- 236

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++M+       ++I ++     APRFS +G +  I + K  ++ +Y+ DL +    ++
Sbjct: 237 EIFIMNIYTG-EREKITSYPRHNGAPRFSPDGNKLAIVLSKTGSLHVYTFDLNTRKLTQI 295

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T     N    + PD   ++F SDR GK Q+Y +        R++     +      +P 
Sbjct: 296 TRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLGSGSIDRLTWQGSQNLGGQ-ITPD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  +     S   F +     +    ++L +    ++P+ +P+G  +++S   +      
Sbjct: 355 GRFLVMVNRSNAGFNLAKQDLETGALQVLTKTLLDESPSIAPNGGMVVYSSIYNKKN--V 412

Query: 418 LYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           L  + ++GR +  L  T      P W  F+
Sbjct: 413 LSMVSIDGRFKARLPATNGRVRAPAWSPFL 442


>gi|94501020|ref|ZP_01307544.1| Periplasmic component of the Tol biopolymer transport system
           [Oceanobacter sp. RED65]
 gi|94426767|gb|EAT11751.1| Periplasmic component of the Tol biopolymer transport system
           [Oceanobacter sp. RED65]
          Length = 426

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 111/433 (25%), Positives = 209/433 (48%), Gaps = 14/433 (3%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDV 78
           L+ VL+      S  A + +  +    S + I+   F   + L      +V  DL+RS  
Sbjct: 4   LIFVLLSFLIHASAKAELTIEISQGIASAIPISVVPFQVPEGLTTLPEGIVRNDLERSGH 63

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F +++         +  S   F DW  L  + +V GRV   G D+ +V+++L+DV +  +
Sbjct: 64  FEVLAPKDMLSHP-HVQSDIYFTDWRLLKQEYVVVGRVTPLG-DKYQVQYQLFDVFNETE 121

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           I+ +    +    R +AH ISD IY+ +TG +G F+++I +V+ +      + SL + D 
Sbjct: 122 ILAQTLTGTAEQLRDVAHRISDAIYEQLTGIRGAFSTKIAYVTTNPQ--RTQFSLAIADS 179

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DGA  + +  S   I F P +SP+ +K+AY   +DE   +VY+ D    +  + I   + 
Sbjct: 180 DGAREKVVLRSSYSI-FSPTWSPDGKKLAYVMMEDEGS-KVYIQDLATGQK-ELISAQKG 236

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +  AP FS +G +  +++ KD   +IY+VDL++N   R+T    I+   ++ PD   I+F
Sbjct: 237 INSAPSFSPDGNKLALTLSKDGNSEIYTVDLRTNEWSRITRHYSIDTEPNWMPDGVHIIF 296

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVM 376
            S R G  Q+Y +       +R++ D   +      +  G  +        G  F I  +
Sbjct: 297 TSGRSGSPQIYRVNVETEYVERLTFDGHYNARA-RLAQDGRFLVLVHQAERGGDFHIASL 355

Query: 377 KKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP- 434
                  ++L ED+   ++P+ SP+G  ++++ K +    S L ++ ++G  + L+ +  
Sbjct: 356 DLTRGLLQILTEDTYLDESPSVSPNGVMVMYAAKHNNR--SILAAVSVDGDVKFLVPSKT 413

Query: 435 AYASDPQWVGFMD 447
               +P W  +++
Sbjct: 414 GDVREPAWGPYLN 426


>gi|294140561|ref|YP_003556539.1| tolB protein [Shewanella violacea DSS12]
 gi|293327030|dbj|BAJ01761.1| tolB protein [Shewanella violacea DSS12]
          Length = 442

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 107/447 (23%), Positives = 204/447 (45%), Gaps = 23/447 (5%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSAN--YSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
            L   L L      + + A + +          P+++    +  +  +  ++S+VV  DL
Sbjct: 3   TLGKWLFLSLIILSSPVRAALDIVITEGVDAARPIAVIPFVWQGMGVMPEQISDVVMSDL 62

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  F  +      Q+  +  S    +DW+S+ A+ ++ G V   G D+  V F L D+
Sbjct: 63  TRSGTFKPLDDLGLPQRNISNVSQFVAKDWSSIEAEAVIMGSVKPRGNDQYLVTFDLVDL 122

Query: 134 KDRKQ-------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
              +              I  ++   + A +R   H ISD +Y+ +TG +G F + I +V
Sbjct: 123 AKAQMQQGAGPRSSREYLIDSRETVITAAQFRHYGHRISDLVYEKLTGIRGAFLTHIAYV 182

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                       L + D DG N + L  S +  L  P +SP+  K+AY +++++    ++
Sbjct: 183 MVKHGE-KSPYQLMISDYDGHNEQMLLRSAEP-LMSPSWSPDGSKLAYVSFENKKS-EIF 239

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D    ++  ++ +F+ +  AP FS +GK+  +++ KD   +IY +D+ + A +R+TN 
Sbjct: 240 IQDIYT-QSRHKVTSFKGINGAPVFSPDGKKLALTLSKDGQPEIYVIDIATKALKRVTNH 298

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+  AS+ PD   ++F S+R G+ Q+Y         +R++ + E +    V +P G  
Sbjct: 299 YAIDTEASWFPDGKSLIFTSERGGRPQIYKATLASGKVQRLTYEGEWNLGGSV-APDGRS 357

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + F   +  KF I  M  +    ++L      ++P+ +P+G  +I+    DG     L +
Sbjct: 358 MIFVNRTNGKFNIARMDLETHFMQVLSSTRLDESPSVAPNGTMVIYGTTHDGKQ--VLGA 415

Query: 421 IDLNGRNE-TLINTPAYASDPQWVGFM 446
           +  +GR +  L         P W  F+
Sbjct: 416 VSTDGRFKARLPAGQGEVKSPSWSPFL 442


>gi|226945713|ref|YP_002800786.1| translocation protein TolB [Azotobacter vinelandii DJ]
 gi|226720640|gb|ACO79811.1| Beta propeller TolB [Azotobacter vinelandii DJ]
          Length = 430

 Score =  377 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 112/420 (26%), Positives = 202/420 (48%), Gaps = 12/420 (2%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
                 + V + +A  +P+++    +     +   ++E+V  DL+ S VF  I + +   
Sbjct: 19  AQAADPLVVTSGTARATPIAVVPFGWQGGSVMSDDMAEIVGNDLRNSGVFEPIPRQNMIS 78

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
           + T P  I  ++DWN+LGAQ ++ G ++  G  RL+V++ L +V   +Q++      S  
Sbjct: 79  QPTGPGEII-YRDWNALGAQYVLVGNIVPAG-GRLQVQYALMNVATEQQVLAGSVSGSGD 136

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
             R +AH I+D  ++ +TG KG F++R+L+V+   + G  + +L   D DGA    L  S
Sbjct: 137 QVRDMAHYIADQAFEKLTGIKGAFSTRLLYVTAERMGGGTRYTLQRADYDGARAVILLQS 196

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R+ I   PRF+P+ +++AY +++ +   R+++      R  ++I NF  +  AP FS +G
Sbjct: 197 REPI-LSPRFAPDGRRIAYVSFEQKRP-RIFIQHIDTGR-REQITNFEGLNGAPAFSPDG 253

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R    + KD   +IY ++L S   +R+TN   I+    +  D   + F SDR GK Q+Y
Sbjct: 254 SRLAFVLSKDGNPEIYVMNLASRQLQRVTNHFGIDTEPFWGADGQTLYFTSDRAGKPQIY 313

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLV 387
                G   +R+S     +  +P  S     +           F +          R+L 
Sbjct: 314 RQTI-GGGAERVSFVGNYNA-NPKLSADEKTLVMIHRQDGYTNFKVAAQDLQRGTLRVLS 371

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFM 446
           + S  ++PT +P+G  LI++ +  G     L    +NGR    + T      +P W  ++
Sbjct: 372 DTSLDESPTVAPNGTMLIYATRHQGRG--VLMLASINGRVRLPLPTAQGEVREPSWSPYL 429


>gi|82703827|ref|YP_413393.1| translocation protein TolB [Nitrosospira multiformis ATCC 25196]
 gi|82411892|gb|ABB76001.1| TolB-like protein [Nitrosospira multiformis ATCC 25196]
          Length = 441

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 112/450 (24%), Positives = 208/450 (46%), Gaps = 18/450 (4%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M++        + K++    ++       +   A + +       + + +A   F   + 
Sbjct: 1   MAIAMLPTPSRSHKLSGYAAVLFFLWLVCSPAQAALNIEIFGGGANQIPVAIVPFSGEEG 60

Query: 61  LGGK-VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
           LG + ++ V+S DLQR+ +F L+       +   P  +  F DW + GA  L  G  I  
Sbjct: 61  LGAQSLTPVISADLQRTGLFKLVDPGGL--RPHEPVEVS-FPDWINRGASALAIGTAIPV 117

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
              ++ +  RL DV  + ++       +P   R  AH I+D IY+ +TG+ G F++RI +
Sbjct: 118 SGGQISIRVRLLDVARQAELGSYVETVAPEQLRAAAHRIADMIYEKLTGDVGVFSTRIAY 177

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +       K SL V D DG N + +    + I+  P +SP+  ++AY +++++    V
Sbjct: 178 VIKQG----KKYSLQVADADGFNAQPVIEYTEPII-SPAWSPDGTRLAYVSFENKKP--V 230

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             + T   R  K + NFR    AP +S +G++  + +       I+ ++      +RLT 
Sbjct: 231 VYVQTLATRTRKAVANFRGSNSAPAWSPDGRKLAVVLSVMGGSQIFLINSDGGGLQRLTQ 290

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK---RISQDKEASYFDPVWSP 356
           +  I+   S+SPD   I+F SDR G  Q+Y M   G   K   R++ +   +   P +SP
Sbjct: 291 SSGIDTEPSFSPDGRYIIFTSDRGGSPQIYRMPVTGGVSKVAERLTFEGSYNV-SPRYSP 349

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G    F   SG++F + +      Q RLL +    ++P+++P+GR ++++ +  G    
Sbjct: 350 DGKGFTFIHRSGDRFNVAIQDFATGQVRLLTDSRFDESPSFAPNGRMVLYATEIRGRGI- 408

Query: 417 KLYSIDLNGRNETLINTP-AYASDPQWVGF 445
            L ++  +GR    ++T      +P W   
Sbjct: 409 -LSAVSSDGRTRQQLSTQTGDIREPAWGPL 437


>gi|212634657|ref|YP_002311182.1| translocation protein TolB [Shewanella piezotolerans WP3]
 gi|226705893|sp|B8CLE4|TOLB_SHEPW RecName: Full=Protein tolB; Flags: Precursor
 gi|212556141|gb|ACJ28595.1| TolB protein [Shewanella piezotolerans WP3]
          Length = 442

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 109/443 (24%), Positives = 203/443 (45%), Gaps = 21/443 (4%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
            LL  L+    P      + +        P+++    +     +  ++S+VV  DL RS 
Sbjct: 7   WLLASLLICSMPAKAALDIVITEGVDAARPIAVVPFVWQGTGPMPSQISDVVMSDLARSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F+   + S  Q+  +  +    + W +  A+ +V G +   G D+  V F+L D+   +
Sbjct: 67  TFSPSDELSLPQRNISTLAQFDAKAWMAQPAEAVVMGSIKPYGADKYLVSFQLIDLVKAQ 126

Query: 138 Q-------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
                         I  ++   S A +R+  H ISD +Y+ +TG +G F +RI +V    
Sbjct: 127 LQSGAGPQAANDLVIDSRETVISAAQFRQYGHRISDVVYEKLTGIRGAFLTRIAYVVVKH 186

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L + D DG N + L  S +  L  P +SP+ Q++AY ++++     V++ + 
Sbjct: 187 GE-KSPYQLMISDYDGYNEQMLLRSPEP-LMSPSWSPDGQQLAYVSFENRKA-EVFVQNI 243

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +A K++ +F  +  AP FS +GK+  +++ KD   DIY VD+ ++A +R+TN   I+
Sbjct: 244 YT-QARKKVTSFNGINGAPVFSPDGKKLALTLSKDGQPDIYVVDIATSALKRVTNHYSID 302

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              S+ PD   ++  S+R G+ QLY +  +     R++ + E +      +P G  I F 
Sbjct: 303 TEPSWFPDGKSLLLTSERGGRPQLYRVFLDSGKISRLTFEGEWNLGG-SIAPDGRSIVFV 361

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +  KF I  M  +    ++L      ++P+ +P+G  +I+     G     L ++ ++
Sbjct: 362 NRTNGKFNIARMDLETRFMQVLTSTRLDESPSLAPNGTMVIYGTTYQGKQ--VLAAVSMD 419

Query: 425 GRNE-TLINTPAYASDPQWVGFM 446
           GR +  L         P W  F+
Sbjct: 420 GRFKARLPVGQGEVKSPSWSPFL 442


>gi|239815673|ref|YP_002944583.1| translocation protein TolB [Variovorax paradoxus S110]
 gi|239802250|gb|ACS19317.1| Tol-Pal system beta propeller repeat protein TolB [Variovorax
           paradoxus S110]
          Length = 408

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 109/416 (26%), Positives = 189/416 (45%), Gaps = 14/416 (3%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
              A  +V  +    + + IA   F   D    K+SE+V  DL+RS  F  +       +
Sbjct: 3   PALAQFRVEVSGVGLTQLPIALVPFKGQDASPQKISEIVQADLERSGQFRGVDASG---Q 59

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
             +  S P    W    A  LV G V +    R  V FRLWDV   + + G+ +      
Sbjct: 60  ALDEASRPDLALWRQRTADSLVVGSVTRLADGRFDVRFRLWDVVRGQDLGGQSYTVPQGD 119

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R  +H I+D +Y+ +TG+KG F++RI +V+     G  + SL V D DG N +    S 
Sbjct: 120 LRLASHRIADYVYEKLTGDKGIFSTRIAYVT----KGGSRYSLWVADADGENAQAALASP 175

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           + I+  P +S N Q++AY +++    + VY+ +    +  + + NFR    AP ++ +G 
Sbjct: 176 EPII-SPVWSSNGQQLAYVSFESRKPV-VYVHNVASGQ-RRLLANFRGSNSAPAWAPDGG 232

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
              +++ +D    +Y++        RLT +  I+    YS D S I F SDR G  Q+Y 
Sbjct: 233 SLAVTLSRDGGSQLYTIPASGGEPRRLTQSASIDTEPVYSADGSTIYFVSDRGGAPQIYK 292

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M ++G    R++     +   P  S  G  +A+    G  F + VM+        + + S
Sbjct: 293 MSASGGAPTRVTFSGTYN-ISPSVSGDGRWLAYISRVGGAFKLHVMELATGNVSAITDTS 351

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
             ++P+++P+ + ++++    G     L +  L+G+    L        +P W  F
Sbjct: 352 ADESPSFAPNSKLIVYATHLQGR--EALMTTTLDGKIKARLAGQGGDIREPDWGPF 405



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 15/178 (8%)

Query: 141 GKKFFSSPAS---WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           G + ++ PAS    R++  + S D     + +     S I FVS+   +      +  M 
Sbjct: 243 GSQLYTIPASGGEPRRLTQSASIDTEPVYSADG----STIYFVSDRGGAP----QIYKMS 294

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             G     +T S       P  S + + +AY +       ++++M+              
Sbjct: 295 ASGGAPTRVTFSG-TYNISPSVSGDGRWLAYIS-RVGGAFKLHVMELATGNVSAI--TDT 350

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           S   +P F+ N K  + +        + +  L      RL           + P   Q
Sbjct: 351 SADESPSFAPNSKLIVYATHLQGREALMTTTLDGKIKARLAGQGGDIREPDWGPFQKQ 408


>gi|192362452|ref|YP_001981531.1| tolB protein [Cellvibrio japonicus Ueda107]
 gi|190688617|gb|ACE86295.1| tolB protein [Cellvibrio japonicus Ueda107]
          Length = 427

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 115/433 (26%), Positives = 212/433 (48%), Gaps = 14/433 (3%)

Query: 20  LLVLIGGFFPTSIHAFVK-VATNSANYSPVSIAFTKFVSIDE-LGGKVSEVVSKDLQRSD 77
           L+ ++   F    HA +  V    +  +P+ IA   F      L   VS ++  D + S 
Sbjct: 4   LVFILFSVFAMVAHAQMNNVIVTQSVQNPIKIAVVPFDWAGGRLPEDVSSIIRNDFRFSG 63

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F+ I+ +       +   I  ++DW  LGA+ L+ G + ++   R    + L+DV  ++
Sbjct: 64  QFDPIAPERMLSFPVSEVGIH-YRDWKVLGAEYLLIGSLTQQA-GRYYASYELFDVVKQQ 121

Query: 138 QIIGK-KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           ++  K     +    R IAH ISD +Y++ITG +G F++++++V         +  L + 
Sbjct: 122 RVFAKLTVDGTELQLRDIAHHISDKVYETITGIRGIFSTKLIYVEAY--QHPQRYRLMLS 179

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D DGA  R L  SR  I   P +SPN Q+VAY +++ E+   +Y+MD    R  +++ +F
Sbjct: 180 DIDGARSRALLDSRFPI-LSPVWSPNGQRVAYVSFEAENKPAIYIMDIATQR-RQQMTSF 237

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           R +  AP +S +G++  + + KD   +IY +++ +   +R+TN   I+   S++ D + +
Sbjct: 238 RGLNGAPSWSPDGQKLAMVLSKDGNPEIYVMNVLTRQLDRVTNHFAIDSEPSWAADGASL 297

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGV 375
            F SDR GK Q+Y +      Q+R++ D + +    V SP G  +    K  G  + I  
Sbjct: 298 YFTSDRGGKPQIYQVNLATKQQERVTFDGDYNARSRV-SPDGKYLVVLNKRPGGNYHIAA 356

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL-INTP 434
                   R+L E +  ++P+ +P+G  L+++ +  G     L ++ L+ R + L     
Sbjct: 357 QDLKTGNLRILSETNLDESPSIAPNGAMLMYATRSGGKG--VLAAVSLDARVKILQPPKQ 414

Query: 435 AYASDPQWVGFMD 447
               +P W  F +
Sbjct: 415 GDVREPAWSPFFN 427


>gi|134294844|ref|YP_001118579.1| translocation protein TolB [Burkholderia vietnamiensis G4]
 gi|166229977|sp|A4JBU1|TOLB_BURVG RecName: Full=Protein tolB; Flags: Precursor
 gi|134138001|gb|ABO53744.1| TolB, N-terminal domain protein [Burkholderia vietnamiensis G4]
          Length = 431

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 190/443 (42%), Gaps = 18/443 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + +A V V       +   IA   F +   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGG----AANAQVNVLITGVGSTQFPIATANFANEAGLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I   S         +      W + GA   V G V +E   + +V
Sbjct: 59  SIVRADLARSGKFTNIDAGS---TPVPETASVDLGAWKAKGANAFVAGSVNREANGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++   
Sbjct: 116 NFILYDTVKQQSLGGLSLTANDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G    +++       IY+V+       RLT +  I+  
Sbjct: 230 GRRY-MVSDQKGNNSAPAWSPDGNTLAVALSLTGNTQIYTVNANGGGLRRLTQSSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+A+
Sbjct: 289 PFYSPDGHWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYN-TSPRVSPDGKLLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +G  F + V          +   +  ++P+++ +G+ ++++ +  G         D 
Sbjct: 348 ISRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYILYATQSGGRNVLAAVPTDG 407

Query: 424 NGRNETLINTPAYASDPQWVGFM 446
           +   + L        +P W  FM
Sbjct: 408 SAPPQILSVQGGSVREPSWGPFM 430


>gi|118574588|sp|Q2Y5H0|TOLB_NITMU RecName: Full=Protein tolB; Flags: Precursor
          Length = 437

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 110/430 (25%), Positives = 201/430 (46%), Gaps = 18/430 (4%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK-VSEVVSKDLQRSDVF 79
           ++       +   A + +       + + +A   F   + LG + ++ V+S DLQR+ +F
Sbjct: 17  VLFFLWLVCSPAQAALNIEIFGGGANQIPVAIVPFSGEEGLGAQSLTPVISADLQRTGLF 76

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
            L+       +   P  +  F DW + GA  L  G  I     ++ +  RL DV  + ++
Sbjct: 77  KLVDPGGL--RPHEPVEVS-FPDWINRGASALAIGTAIPVSGGQISIRVRLLDVARQAEL 133

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
                  +P   R  AH I+D IY+ +TG+ G F++RI +V +       K SL V D D
Sbjct: 134 GSYVETVAPEQLRAAAHRIADMIYEKLTGDVGVFSTRIAYVIKQG----KKYSLQVADAD 189

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N + +    + I+  P +SP+  ++AY +++++    V  + T   R  K + NFR  
Sbjct: 190 GFNAQPVIEYTEPII-SPAWSPDGTRLAYVSFENKKP--VVYVQTLATRTRKAVANFRGS 246

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP +S +G++  + +       I+ ++      +RLT +  I+   S+SPD   I+F 
Sbjct: 247 NSAPAWSPDGRKLAVVLSVMGGSQIFLINSDGGGLQRLTQSSGIDTEPSFSPDGRYIIFT 306

Query: 320 SDREGKEQLYVMQSNGSDQK---RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           SDR G  Q+Y M   G   K   R++ +   +   P +SP G    F   SG++F + + 
Sbjct: 307 SDRGGSPQIYRMPVTGGVSKVAERLTFEGSYNV-SPRYSPDGKGFTFIHRSGDRFNVAIQ 365

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-A 435
                Q RLL +    ++P+++P+GR ++++ +  G     L ++  +GR    ++T   
Sbjct: 366 DFATGQVRLLTDSRFDESPSFAPNGRMVLYATEIRGRGI--LSAVSSDGRTRQQLSTQTG 423

Query: 436 YASDPQWVGF 445
              +P W   
Sbjct: 424 DIREPAWGPL 433


>gi|94496181|ref|ZP_01302759.1| TolB-like protein [Sphingomonas sp. SKA58]
 gi|94424360|gb|EAT09383.1| TolB-like protein [Sphingomonas sp. SKA58]
          Length = 444

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 153/424 (36%), Positives = 225/424 (53%), Gaps = 19/424 (4%)

Query: 35  FVKVATNSANYSPVSIAFTKF----------VSIDELGGKVSEVVSKDLQRSDVFNLISQ 84
            + V       S + IA               S  +LG K++EV++ DL+ S +F+    
Sbjct: 27  QLSVDVTGDIDSNLKIAVPPMPAQQEADTPAGSASDLGRKIAEVIASDLKSSGLFDPSGP 86

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR-LRVEFRLWDVKDRKQIIGKK 143
                      + P++Q W +   Q LV G V   G +  + V   L+DV  ++++  + 
Sbjct: 87  SGLPAIPFPEVTFPQYQKWGAY--QALVQGFVRTSGGEADITVGCYLYDVALQQELTRQG 144

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           +  +P  WR+ AH  +D IY  ++GE   F+SRI +++ES   G     L +MD DGAN 
Sbjct: 145 YVVAPRDWRRAAHKCADAIYARLSGESPFFDSRIAYIAESGPKGNRTKRLAIMDSDGANH 204

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R++T  +  I   PRFSP+ + + Y +Y     +R+Y+ D    +  + +    +   AP
Sbjct: 205 RFITNGQS-IALTPRFSPDYKSIVYVSY-LGSRVRLYVYDIGTGQQ-RLVTESNNPTFAP 261

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R+S +G+  L S+      DIY V     +  RLTN+  I++  SYSPD S+IVFESDR 
Sbjct: 262 RWSPDGRNILFSMAVAGNTDIYRVSANGGSPVRLTNSPGIDVGGSYSPDGSRIVFESDRS 321

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G +QLYVM ++GS+Q+RIS      Y  P WSP+GDLIAFTK SG+ F I VM  +G  E
Sbjct: 322 GGQQLYVMNADGSNQRRISHGG-GRYATPEWSPRGDLIAFTKLSGD-FKIAVMSPNGDNE 379

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQW 442
           R+L      + PTWSP+GR L F R   G  G S+++ +DL G NE  I TP   SDP W
Sbjct: 380 RILTNGWQDEQPTWSPNGRVLQFFRTTPGRQGTSQVWQVDLTGVNERRIPTPLSGSDPAW 439

Query: 443 VGFM 446
              +
Sbjct: 440 GPLL 443


>gi|119896708|ref|YP_931921.1| translocation protein TolB [Azoarcus sp. BH72]
 gi|166229974|sp|A1K2H9|TOLB_AZOSB RecName: Full=Protein tolB; Flags: Precursor
 gi|119669121|emb|CAL93034.1| putative translocation protein TolB [Azoarcus sp. BH72]
          Length = 427

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 103/418 (24%), Positives = 191/418 (45%), Gaps = 14/418 (3%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
             S  A + +    A  S   +    F +   L   VS++V  DL+RS +F+L+      
Sbjct: 20  SFSAQAQLSIEITGAGASRFPVIIPVFENEASLPRSVSDIVRADLERSGLFSLVDIGPLP 79

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
                   IP      S GA   +   V  +G  R  + FRL+D + + ++       + 
Sbjct: 80  LP---EGQIPDLGSLRSRGADAALAASVFPQGDGRYEIRFRLFDTQKQTELGALALRMTA 136

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           A  R  AH I+D +Y+ +TG  G F +RI +V ++      +  L V D DG N +    
Sbjct: 137 AQNRITAHRIADFVYEKLTGLPGYFATRIAYVVKTGP----RYELQVADADGMNAQAALV 192

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           SR+ I+  P +SP+  ++AY +++ +    +  + T      + + NF+    AP +S +
Sbjct: 193 SREPII-SPAWSPDGGRLAYVSFEAKKP--IIYVHTLATGQRQVVANFKGSNSAPAWSPD 249

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G++  + + KD    +Y ++   +   RL ++  I+   ++SPD   I F SDR G  Q+
Sbjct: 250 GQQLSVVLTKDGLSQLYVLNADGSGVRRLASSSGIDTEPAWSPDGQWIYFTSDRGGSPQI 309

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y + + G   +R++ D   +      S  G L+AF   +  +F + V      Q  +L +
Sbjct: 310 YRIPTAGGAAQRVTFDGTYNVTA-RPSADGRLLAFITRNNGRFQVAVQDLTTRQTTILTD 368

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
            +  ++P+++P+GR ++++    G     L ++  +GR  + L    A   +P W   
Sbjct: 369 SARDESPSFAPNGRMILYATDAGGRG--VLAAVSSDGRVKQRLSVQAADVREPAWGPL 424


>gi|254253146|ref|ZP_04946464.1| TolB [Burkholderia dolosa AUO158]
 gi|124895755|gb|EAY69635.1| TolB [Burkholderia dolosa AUO158]
          Length = 432

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 190/443 (42%), Gaps = 17/443 (3%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+   G    + +A V V       +   IA   F +   L  +++
Sbjct: 3   LMTKLGFRALVASCLIAASG---GAANAQVNVLITGVGSTQFPIATANFANEAGLPQQIT 59

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I   S         +      W + GA   V G V +E   + +V
Sbjct: 60  SIVRADLARSGKFTNIDAGS---TPVPETASVDLGAWKAKGANAFVAGSVNREANGQYKV 116

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++   
Sbjct: 117 NFILYDTVKQQSLGGLSLTANDNTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN- 175

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 176 ---RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPT 230

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G    +++       IYSV+       RLT +  I+  
Sbjct: 231 GRRY-MVSDQKGNNSAPAWSPDGNTLAVALSLTGNTQIYSVNANGGGLRRLTQSNSIDTE 289

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+A+
Sbjct: 290 PFYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYN-TSPRVSPDGKLLAY 348

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +G  F + V          +   ++ ++P+++ +G+ ++++ +  G         D 
Sbjct: 349 ISRTGGGFKLYVQDLQTGAANAITNTNHDESPSFAANGQYILYATQSGGRNVLAAVPSDG 408

Query: 424 NGRNETLINTPAYASDPQWVGFM 446
           +   + L        +P W  FM
Sbjct: 409 SAPPQILSVQGGSVREPSWGPFM 431


>gi|312796780|ref|YP_004029702.1| TolB protein [Burkholderia rhizoxinica HKI 454]
 gi|312168555|emb|CBW75558.1| TolB protein [Burkholderia rhizoxinica HKI 454]
          Length = 430

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 196/444 (44%), Gaps = 21/444 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           + ++L +K  +  LLV  G     S  A + V       +   IA   F +      +++
Sbjct: 3   LIKKLGLKTLVASLLVTAG----VSARADLTVLVTGVGSTQFPIAVASFTNEASSPQQIA 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  +L RS  F+ I   S      +         W + GA   V G V +    +  V
Sbjct: 59  AIVRANLARSGKFSNIDAGSAP---VSESDSVDLGGWKAKGANAFVGGSVTRLANGQYEV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            FRL+D   ++ + G    S  +  R  AH  +D IYQ + G +G F +R+ +V+     
Sbjct: 116 RFRLYDTIKQQSLGGLSLVSPESGLRMSAHKAADYIYQKLLGSRGMFATRLSYVTRHGG- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N      S + I+  P +SP+  K+AY +++ +  + VY+ D   
Sbjct: 175 ---RYQLKISDSDGQNEHIALTSPEPII-SPTWSPDGTKLAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G +  +++       I+ V+   +   RLT    I+  
Sbjct: 230 GRRV-MVSDQKGNNSAPAWSPDGTKLAVALSLTGNTQIFIVNADGSGLRRLTRGHSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
            ++SPD   I F SDR G+ Q+Y M + G   S  +R++ +   +    V SP G  +A+
Sbjct: 289 PAFSPDGQSIYFTSDRGGQPQIYKMPAQGESASAAQRVTFNGSYNTSARV-SPDGKELAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G  F + +          L + +  ++P+++ +G+ L+++ + +G     L ++  
Sbjct: 348 ISRVGGAFRLYLQDLSTGSATALTDTTRDESPSFAANGQYLLYATQVNGRQ--VLAAVST 405

Query: 424 NGRNETLINTP-AYASDPQWVGFM 446
           +G    +++ P     +P W  FM
Sbjct: 406 DGSIRQVLSIPGGGVREPSWGPFM 429


>gi|85710724|ref|ZP_01041788.1| translocation protein TolB precursor [Erythrobacter sp. NAP1]
 gi|85687902|gb|EAQ27907.1| translocation protein TolB precursor [Erythrobacter sp. NAP1]
          Length = 473

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 149/409 (36%), Positives = 217/409 (53%), Gaps = 17/409 (4%)

Query: 48  VSIAFTKFV------------SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           + IA   F                 LG +++ V++ +L+ + +F     DS  +      
Sbjct: 67  LGIAIPSFATDSNRPTPANSDGTAALGREIARVITANLRNNGLFKPTGPDSLPEPRFQQI 126

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
           + P +  W   GA++LV G V   G DRL V   L+DV  + ++I + +   PA WR+ A
Sbjct: 127 TAPSWSSWTGRGAEMLVHGYVRARGDDRLVVGCYLYDVALQDELIREGWVVRPADWRRAA 186

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H  SD IY  +TGE   F+SRI +++E+         L VMD DGAN R+LT        
Sbjct: 187 HKCSDLIYARLTGESPFFDSRIAYIAETGPKDNRVKRLAVMDSDGANHRFLTLG-SATAL 245

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            PR+SP+  K+ Y +Y D +  R+Y+ D    +    +   ++  LAPR+S +G+  L S
Sbjct: 246 TPRYSPDYSKILYLSYVDGNP-RIYVYDIGSGQQT-LVTENQNPTLAPRWSPDGRHILYS 303

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +      DIY V +    +ERLT+T  I+I  SYSPD  +IVFESDR G +Q YVM ++G
Sbjct: 304 MAVAGNTDIYRVPVTGGRSERLTDTPGIDIGGSYSPDGRRIVFESDRSGTQQCYVMDADG 363

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           S+Q+RI+         P WSP+GD IAFT+ +G+ F + VM   G   R+L      +AP
Sbjct: 364 SNQRRITFFG-GRCATPEWSPRGDQIAFTRIAGD-FNVAVMTPSGGSLRVLTNGWQDEAP 421

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           TW+P+GR + F R       S L+ +DL GRNE  + TP  ASDP W  
Sbjct: 422 TWAPNGRIIQFFRTTRDAGRSSLWQVDLTGRNERRLPTPVDASDPAWGP 470


>gi|325981318|ref|YP_004293720.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Nitrosomonas sp. AL212]
 gi|325530837|gb|ADZ25558.1| Tol-Pal system beta propeller repeat protein TolB [Nitrosomonas sp.
           AL212]
          Length = 432

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 103/430 (23%), Positives = 203/430 (47%), Gaps = 17/430 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF 79
           LL  +     +S+HA + +       S + I    F     L   ++ V++ DLQR+ +F
Sbjct: 12  LLFWLLWLVSSSLHAQLNIEIFGGGASRIPITIVPFAEESRLQQNITPVINADLQRTGLF 71

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
            LI          +P  +  + DW + G   LV GRV     D++ ++FR+ D+  + Q+
Sbjct: 72  RLIDPA--GSSPHSPAEVA-YADWANRGVNALVIGRVTHLSGDQVEIQFRVMDIAKKSQL 128

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            G          R  AH I+D IY+++TG+ G F++RI +V +       K +L V D D
Sbjct: 129 TGLAITVPTTQLRAAAHRIADVIYEALTGDVGVFSTRIAYVLKRGN----KYALQVADAD 184

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N + +    + I+  P +SP+  ++AY +++++    V  + T   R  + + NF+  
Sbjct: 185 GYNAQSIIEYTEPII-SPAWSPDGNQLAYVSFENKKP--VVYVQTLSTRERRAVANFKGS 241

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP +S +GK+  + +       I+ V+   +  +RL+ +  I+   S+SPD   ++F 
Sbjct: 242 NSAPAWSPDGKKLAVVLTGQGGSQIFLVNTDGSGLQRLSRSSGIDTEPSFSPDGRYLLFT 301

Query: 320 SDREGKEQLYVMQ---SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           SDR G  Q+Y M    +  S+ +R++ +   +   P +S       F   +  +F + V 
Sbjct: 302 SDRGGSPQIYRMPVTAAESSNAERLTFEGSYNV-SPDYSHDNKSFTFIHRNNNQFNVAVQ 360

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPA 435
           +    Q  +L      ++P+++P+G+ ++++ + +G     L ++  +G+    ++    
Sbjct: 361 EIGSRQIEILTNSKFDESPSFAPNGKMILYATEINGHGI--LSAVSRDGQTRQQLSVQAG 418

Query: 436 YASDPQWVGF 445
              +P W   
Sbjct: 419 DIREPAWGPL 428


>gi|90022174|ref|YP_528001.1| translocation protein TolB [Saccharophagus degradans 2-40]
 gi|119371059|sp|Q21HP0|TOLB_SACD2 RecName: Full=Protein tolB; Flags: Precursor
 gi|89951774|gb|ABD81789.1| TolB-like protein [Saccharophagus degradans 2-40]
          Length = 445

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 108/432 (25%), Positives = 196/432 (45%), Gaps = 13/432 (3%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
            L L+L+L  G       A + +       +P  IA   F     L   VS ++S DL R
Sbjct: 23  ALSLMLILAAGM----ARAELVIEITQGADNPTPIAVVPFGGNGGLSENVSRIISADLDR 78

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F   S ++     +    I  ++DW  LG   LV G + +        E+ L+DV  
Sbjct: 79  SGLFESKSPENMLSFPSKQADI-FYRDWRILGTDYLVIGDIQRSESG-YVAEYGLYDVLQ 136

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           +K+++GK     P   R +AH ISDD+YQ++TG +G F+++IL++ +   S   +  L  
Sbjct: 137 QKKMLGKVLSVGPTGLRDMAHKISDDVYQALTGIRGAFSTKILYIEDMGPSVKERYRLIK 196

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DGA  + +  S +  L  P +S +  +VAY +++             I    +++ N
Sbjct: 197 ADADGAREQLIFKSSEP-LLSPAWSNDLTQVAYVSFETSRP--AIFRHNLITGKREQLTN 253

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--INISASYSPDS 313
           F+ +  AP +S +  +  + + KD   +IY +D+ + A +R+T T    I+   +++ D 
Sbjct: 254 FKGLNGAPAWSPDDSKLALVLSKDGNPEIYILDIATRALQRVTKTHSAVIDTEPNWTADG 313

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             I+F S+R G  Q+Y +       +R++ + + +   P  +P G  +         F I
Sbjct: 314 KGIIFTSNRGGNPQIYQVGLATGRVERLTFEGDYNAR-PRVTPDGKSLVMVHREDGVFHI 372

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                     R+L E    ++P+ +P+G  L+++ + +        SID  G    L + 
Sbjct: 373 AWQDIQSGDMRILTETWLDESPSIAPNGAMLLYATQHNNKGVLAAVSIDA-GVKFRLPSK 431

Query: 434 PAYASDPQWVGF 445
                +P W  +
Sbjct: 432 QGSVREPAWSPY 443


>gi|332286926|ref|YP_004418837.1| TolB protein [Pusillimonas sp. T7-7]
 gi|330430879|gb|AEC22213.1| TolB protein [Pusillimonas sp. T7-7]
          Length = 436

 Score =  375 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 117/448 (26%), Positives = 207/448 (46%), Gaps = 23/448 (5%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           MSLR+           L + L++I        HA ++V  +    +   IA   F   D 
Sbjct: 11  MSLRWRAW-------ALGIFLLVISLAAARPSHAQLRVDISGVGATQYPIAIADFSG-DA 62

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
            G  VSEV+  DL RS  F L++         N +S    ++W   GA  L  G + + G
Sbjct: 63  QGQNVSEVIRADLTRSGQFRLVNATGA---NLNTESTIAHEEWRGRGADYLAYGSISQSG 119

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
             +  V +RL D   + Q+ G  F  +    R+I+H I+D IY+ ITG +G F++RI +V
Sbjct: 120 -GQYSVSYRLVDTVRKTQLDGVAFSGTEKELRRISHQIADRIYEKITGVRGVFSTRIAYV 178

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            ++  +      L + D DG N + +  S+  I+  P +SP+ +++AY +++      V 
Sbjct: 179 LQTGNT----YELQIADADGQNPQVMLRSKQSII-SPAWSPDGKRLAYVSFETGKP--VV 231

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + T        + NF+    AP +S NG+   I + +D    IY+++   +   R+  +
Sbjct: 232 YVQTLSSGQRVPLANFKGNNSAPAWSPNGQNLAIVLSRDSISQIYTINADGSGLRRVMRS 291

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+    Y+ D   ++F SDR G   +Y +  +G D +RI+ +   +   P  SP G+ 
Sbjct: 292 PMIDTEPQYTADGGSLIFTSDRGGSPHIYKVPVSGGDAQRITFNGSYN-ISPAISPDGNS 350

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + +       F I +       E+LL    + ++P+++P+G  +++S  + G   S L  
Sbjct: 351 LVYVTRRNGAFRIALQNMGSGSEQLLTAGPDDESPSFAPNGMQILYSSVQGGR--SVLAV 408

Query: 421 IDLNGR-NETLINTPAYASDPQWVGFMD 447
             ++GR  +TL        +P W  F +
Sbjct: 409 TSVDGRVRQTLSALNGKVREPTWGPFTN 436


>gi|157962385|ref|YP_001502419.1| translocation protein TolB [Shewanella pealeana ATCC 700345]
 gi|189035989|sp|A8H5P7|TOLB_SHEPA RecName: Full=Protein tolB; Flags: Precursor
 gi|157847385|gb|ABV87884.1| Tol-Pal system beta propeller repeat TolB [Shewanella pealeana ATCC
           700345]
          Length = 440

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 107/445 (24%), Positives = 198/445 (44%), Gaps = 21/445 (4%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSAN--YSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
           NL   L+         + A + +          P+++    +     +  ++S+VV  DL
Sbjct: 3   NLGKWLLTSLLICSMPVKAALDIIITEGVDAARPIAVIPFVWQGTGPMPSQISDVVMSDL 62

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  F+   + S  Q+  +  +      W +  A+ +V G +   G D+  V F L D+
Sbjct: 63  ARSGTFSPADELSLPQRGISTLAQFNASAWMAQPAEAVVMGSIKPYGGDKYLVSFELIDL 122

Query: 134 KDRKQ-----------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
              +            I  ++   S A +R+  H ISD +Y+ +TG +G F +R+ +V  
Sbjct: 123 VKAQLQSDSMSTKDLVIDSRETVISAAQFRQYGHRISDVVYEKLTGIRGAFLTRVAYVVV 182

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +         L + D DG N + L  S +  L  P +SP+ Q +AY ++++     V++ 
Sbjct: 183 NHGE-KSPYKLMIADYDGYNEQMLLRSPEP-LMSPSWSPDGQSLAYVSFENRKA-EVFVQ 239

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +    +  K I +F  +  AP FS +GK+  +++ KD   ++Y VD+ + A +R+TN   
Sbjct: 240 NIYTQQRTK-ITSFDGINGAPVFSPDGKKLAVTLSKDGQPEVYVVDIATKAIKRVTNHYA 298

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I+   S+ PD   ++  S+R G+ QLY +  +     R++ + E +      SP G  I 
Sbjct: 299 IDTEPSWFPDGKSLLITSERGGRPQLYRVFLDSGKISRLTFEGEWNLGG-SISPDGRSII 357

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           F      KF I  M  +    ++L      ++P+ +P+G  +I+     G     L ++ 
Sbjct: 358 FVNRINGKFNIARMDLETRFMQVLTSTRLDESPSVAPNGTMVIYGTTYQGKQ--VLAAVS 415

Query: 423 LNGRNE-TLINTPAYASDPQWVGFM 446
           ++GR +  L         P W  F+
Sbjct: 416 MDGRFKARLPAGQGEVKSPSWSPFL 440


>gi|301632611|ref|XP_002945375.1| PREDICTED: protein tolB-like, partial [Xenopus (Silurana)
           tropicalis]
          Length = 554

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 103/395 (26%), Positives = 190/395 (48%), Gaps = 13/395 (3%)

Query: 34  AFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
           A  +V       + + IA   F    +   ++S +V  DL+RS  F  I          +
Sbjct: 1   AQFRVEVTGVGLTQLPIALAPFRGEAQSPQRISAIVQADLERSGQFRGIDAAGA---ALD 57

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
             S P    W    A  LVTG +++    R  V FRLWDV   + + G+ F  +    R 
Sbjct: 58  EISRPDMAQWRQKSADSLVTGSIMRLADGRYDVRFRLWDVVRAQDLGGQSFVVNQGDLRL 117

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           +AH I+D +Y+ +TGE+G F++R+ +V+++      + SL V D DG N +    S + I
Sbjct: 118 VAHRIADFVYEKLTGERGVFSTRVTYVTKAGG----RYSLWVADADGENAQAALSSTEPI 173

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  P ++PN  ++AY +++    + VY+ D    R  + I NFR    AP +S +G++  
Sbjct: 174 I-SPAWAPNGTQLAYVSFESRKPV-VYVHDVASGR-RRLIANFRGSNSAPAWSPDGRQLA 230

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +++ +D +  +Y++D       RL  +  I+    +S D   I F SDR G  Q+Y + +
Sbjct: 231 VTLTRDGSSQLYTIDANGGEPRRLMQSSGIDTEPVFSGDGRTIYFVSDRGGAPQIYKVGA 290

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            G + +R++     +   P  SP G  +A+    G  F +  M         + + +  +
Sbjct: 291 TGGNAERVTFSGSYN-ISPSVSPDGRWLAYISRVGGAFKLHAMDLGTGAVNAITDTTADE 349

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            P+++P+ R ++++ ++ G     L +  L+G+ +
Sbjct: 350 NPSFAPNSRLIVYATQQQGR--EALMTTTLDGKIK 382



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 5/134 (3%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S+++ + +   G+  L+V  ++G + +      E     P W+P G  +A+  F   K  
Sbjct: 138 STRVTYVTKAGGRYSLWVADADGENAQAALSSTE-PIISPAWAPNGTQLAYVSFESRKPV 196

Query: 373 IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETL 430
           + V      + RL+     +  AP WSP GR L  +  +DG   S+LY+ID N G    L
Sbjct: 197 VYVHDVASGRRRLIANFRGSNSAPAWSPDGRQLAVTLTRDGS--SQLYTIDANGGEPRRL 254

Query: 431 INTPAYASDPQWVG 444
           + +    ++P + G
Sbjct: 255 MQSSGIDTEPVFSG 268


>gi|124266539|ref|YP_001020543.1| translocation protein TolB [Methylibium petroleiphilum PM1]
 gi|124259314|gb|ABM94308.1| TolB protein precursor, periplasmic component of the Tol biopolymer
           transport system [Methylibium petroleiphilum PM1]
          Length = 421

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 109/412 (26%), Positives = 201/412 (48%), Gaps = 14/412 (3%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
             +V  +    + + IA  KF   ++    V  +V  DL+RS VF  +        + + 
Sbjct: 21  QFRVEISGVGATQLPIAVVKFRDEEKAPQPVGAIVRADLERSGVFRNLDTSGV---VLDE 77

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
            S P   DW    A  LV G V +    R  V +RLWDV   + + G+ +       R  
Sbjct: 78  GSQPAMSDWRGRSADALVGGSVTRLADGRFDVRYRLWDVVKGRDLGGQSYAVPAGDLRLA 137

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH I+D IY+ +TGEKG F++RI +V+     G  + +L V D DG   +    S + I+
Sbjct: 138 AHRIADAIYEKLTGEKGVFSTRIAYVT----KGGGRFTLWVTDADGEGGQSALASPEPII 193

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+ +++AY +++    + VY+ +    +  + + +FR    AP +S +G++  +
Sbjct: 194 -SPAWSPDGRELAYVSFESRKAV-VYVQEVASGK-RRTLASFRGSNSAPAWSPDGRQLAL 250

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ +D    ++ +       +RLT++  I+  A+++PD   I F SDR G  Q+Y + + 
Sbjct: 251 TLSRDGGSQLFVMGRDGEGVKRLTSSGAIDTEATWAPDGKSIYFVSDRGGSPQIYRVPAG 310

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G + +R+S     +   P  SP G  +A+    G  F + VM       R + +  + ++
Sbjct: 311 GGNAERVSFSGSYN-ISPAISPDGRTMAYISRDGGAFRVQVMDLASGTARAVSDTKDDES 369

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
           P+++P+GR +I++ +  G     L +   +G+    L++T A   +P W  +
Sbjct: 370 PSFAPNGRLIIYATRDGGR--DVLMTTTTDGKIKARLVSTQADVREPVWGPY 419



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 48/139 (34%), Gaps = 8/139 (5%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I FVS+   S      +  +   G N   ++ S       P  SP+ + +AY + D   
Sbjct: 291 SIYFVSDRGGSP----QIYRVPAGGGNAERVSFSGS-YNISPAISPDGRTMAYISRD-GG 344

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             RV +MD        R  +      +P F+ NG+  + + +      + +         
Sbjct: 345 AFRVQVMDLASG--TARAVSDTKDDESPSFAPNGRLIIYATRDGGRDVLMTTTTDGKIKA 402

Query: 296 RLTNTLFINISASYSPDSS 314
           RL +T        + P   
Sbjct: 403 RLVSTQADVREPVWGPYGR 421


>gi|167623622|ref|YP_001673916.1| translocation protein TolB [Shewanella halifaxensis HAW-EB4]
 gi|189035988|sp|B0TPX8|TOLB_SHEHH RecName: Full=Protein tolB; Flags: Precursor
 gi|167353644|gb|ABZ76257.1| Tol-Pal system beta propeller repeat TolB [Shewanella halifaxensis
           HAW-EB4]
          Length = 440

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 104/441 (23%), Positives = 199/441 (45%), Gaps = 19/441 (4%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
            LL+ L+    P      + +        P+++    +     +  ++S+VV  DL RS 
Sbjct: 7   WLLVTLLICSMPVKAALDIVITEGIDAARPIAVIPFVWQGTGPMPSQISDVVMSDLARSG 66

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F+   + S  Q+  +  +      W +  A+ +V G +   G D+  V F L D+   +
Sbjct: 67  TFSPADELSLPQRGISTLAQFNASAWMTQPAEAVVMGSIKPYGGDKYLVSFELIDLVKAQ 126

Query: 138 Q-----------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
                       I  ++   + A +R+  H ISD +Y+ +TG +G F +RI +V  +   
Sbjct: 127 LQPDSQSAQDLVIDSRETIITAAQFRQYGHRISDVVYEKLTGIRGAFLTRIAYVVVNHGE 186

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L + D DG N + L  S +  L  P +SP+ Q++AY ++++     +Y+ +   
Sbjct: 187 -KSPYKLMISDYDGYNEQMLLRSPEP-LMSPSWSPDGQRLAYVSFENRKA-EIYVQNIYT 243

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +    + +F  +  AP FS +GK+  +++ KD   ++Y VD+ + A +R+TN   I+  
Sbjct: 244 -QQRTNVTSFDGINGAPVFSPDGKKLAVTLSKDGQPEVYVVDIATKAIKRVTNHYAIDTE 302

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+ PD   ++  S+R G+ QLY +  +     R++ + E +      +P G  I F   
Sbjct: 303 PSWFPDGKSLLITSERGGRPQLYRVFLDSGKISRLTFEGEWNLGG-SIAPDGRSIIFVNR 361

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +  KF I  M  +    ++L      ++P+ +P+G  +I+     G     L ++ ++GR
Sbjct: 362 TNGKFNIARMDLETRFMQVLTSTRLDESPSVAPNGTMVIYGTTYQGKQ--VLAAVSMDGR 419

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L         P W  F+
Sbjct: 420 FKARLPVGQGEVKSPSWSPFL 440


>gi|120554619|ref|YP_958970.1| translocation protein TolB [Marinobacter aquaeolei VT8]
 gi|120324468|gb|ABM18783.1| TolB, N-terminal domain protein [Marinobacter aquaeolei VT8]
          Length = 442

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 110/438 (25%), Positives = 205/438 (46%), Gaps = 12/438 (2%)

Query: 9   EELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGG--KVS 66
             L   +  CL+L L          A + +       S + IA   F     +    KV 
Sbjct: 12  NFLKTPVIACLVLFLTASL---GARAELLIRITEGAGSAIPIAVVPFAESGSMPAGDKVG 68

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL  S  F  +         +    +  F+DW  LG + ++ G++ + G DR++ 
Sbjct: 69  SIVQADLTMSGEFRPLEPSKMLSLPSERSEV-YFRDWRMLGQRYVLVGQLTRNG-DRIQA 126

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            + L+DV   K+I+G+      ++ R + H ISD +Y++ITG  G F++++ +++ S   
Sbjct: 127 RYELFDVNQEKRILGETAAVPASNLRSLGHHISDRVYEAITGAPGVFSTKLAYITVSGEG 186

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L V D DG   +    SR+ I   P +SP+ +K+AY +++      V  +    
Sbjct: 187 EQTRYRLQVSDVDGKRSKVRLESREPI-LSPAWSPDGKKLAYVSFETGKP--VIFVHELA 243

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               +++ +F  +  AP +S++G+  L+++ +D   +IY +DL S    RLT+   I+  
Sbjct: 244 TGERQKVADFPGLNSAPAWSADGRSLLMTLSRDGNAEIYRMDLASRNLTRLTDHWAIDTE 303

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A++      I F SDR G  QLY M+  G++ +RI+     +   P  SP GD + +   
Sbjct: 304 AAWDHADRGIYFTSDRSGGPQLYHMERPGAEPRRITFGSRYNAR-PRPSPTGDYVYYVHQ 362

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               F I     +  +E ++    + ++P+ +P+GR LI++ +++G+    + S D  G 
Sbjct: 363 RDSAFHIARTNLETGEETVITRTGSDESPSVAPNGRLLIYATRQNGEGVLTVVSADG-GA 421

Query: 427 NETLINTPAYASDPQWVG 444
             +L  +     +P W  
Sbjct: 422 AYSLPASEGEVREPAWGP 439


>gi|114319404|ref|YP_741087.1| TolB domain-containing protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|122941253|sp|Q0AC40|TOLB_ALHEH RecName: Full=Protein tolB; Flags: Precursor
 gi|114225798|gb|ABI55597.1| TolB, N-terminal domain protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 428

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 119/432 (27%), Positives = 210/432 (48%), Gaps = 15/432 (3%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG---GKVSEVVSKD 72
            +C L +L+ G    + HA   +         + +A   F    E+      ++ V+S +
Sbjct: 7   TVCTLALLLVGL--QAAHADDIIDVIGGQEGAMPVAVIPFAVTGEIPTPDQDIARVISDN 64

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L RS  F ++ ++    +    D   RF  W +LG   LVTGR+  +G  R+ V F L D
Sbjct: 65  LARSGRFEVLPREELVARPAGLDDT-RFSAWRALGMDYLVTGRMEMDGH-RVSVTFELLD 122

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V    +I G+++   P + R +AH ISD +++ + G  G F ++I +V     +    + 
Sbjct: 123 VFRGNRIEGRRYRLHPDNLRSLAHAISDIVFEEVVGLPGVFGTQIAYVQVEERNDQRIHR 182

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V D DG   R +  SR  I   P +SP + ++AY +++      +Y+ + R  +   R
Sbjct: 183 LMVADADGQRPREILESRQPI-MSPAWSPERDRLAYVSFEGGRS-EIYVQNLRSGQ-RDR 239

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I +FR +  AP +S +G+   +++ +D   +IY + L      RLT+   I+   ++SPD
Sbjct: 240 IASFRGINSAPAWSPDGRHLAVTLSRDGRANIYLLRLDDGHVRRLTDHWAIDTEPTFSPD 299

Query: 313 SSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             +I F SDR G+ Q+Y +  NG    +R++ D + +   P WSP G  IA        F
Sbjct: 300 GERIAFTSDRGGRPQVYTLAVNGPGGVERVTFDGDYNAR-PNWSPDGRRIAMVHRHNGSF 358

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETL 430
            I V   +  + R+L +    ++P ++P+G  +++S    G   S+L ++ ++GR N+ L
Sbjct: 359 RIAVHDLESDRTRVLTDGPWDESPVFAPNGDMIMYSA--GGSGDSRLRTVSVHGRANQAL 416

Query: 431 INTPAYASDPQW 442
                   +P W
Sbjct: 417 PRAGGLTREPAW 428



 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 70/181 (38%), Gaps = 6/181 (3%)

Query: 269 GKRALISVQKDEAMD----IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           G +      ++        +   D        +  +    +S ++SP+  ++ + S   G
Sbjct: 164 GTQIAYVQVEERNDQRIHRLMVADADGQRPREILESRQPIMSPAWSPERDRLAYVSFEGG 223

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + ++YV       + RI+  +  +   P WSP G  +A T     +  I +++ D    R
Sbjct: 224 RSEIYVQNLRSGQRDRIASFRGIN-SAPAWSPDGRHLAVTLSRDGRANIYLLRLDDGHVR 282

Query: 385 LLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            L +   +   PT+SP G  + F+  + G       +++  G  E +     Y + P W 
Sbjct: 283 RLTDHWAIDTEPTFSPDGERIAFTSDRGGRPQVYTLAVNGPGGVERVTFDGDYNARPNWS 342

Query: 444 G 444
            
Sbjct: 343 P 343


>gi|113868785|ref|YP_727274.1| translocation protein TolB [Ralstonia eutropha H16]
 gi|113527561|emb|CAJ93906.1| periplasmic component of the Tol biopolymer transport system
           [Ralstonia eutropha H16]
          Length = 457

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 98/416 (23%), Positives = 186/416 (44%), Gaps = 18/416 (4%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
            + V  +    S + +A   F    +    ++ ++  DL RS     +            
Sbjct: 55  QLNVEISGVGSSQIPVATANFQGEAQAPQNLTAIIRADLARSGRLRNVDPGGA---TVAE 111

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
            +      W S GA   V G V      +  V FRL+D    + + G  F  + +  R  
Sbjct: 112 SANVDLGSWKSRGADAFVAGSVTPAAGGKYEVRFRLYDTVKGQSLGGLAFTVNQSQLRVT 171

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH I+D IY+ + GE+G F +R+ +VS+       +  L + D DG N +    S + I+
Sbjct: 172 AHKIADYIYEKLLGERGVFATRLSYVSKVGG----RYQLLISDSDGQNAQVALTSNEPII 227

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+  +VAY +++ +  + VY+ D    +    + N +    AP +S +G+   +
Sbjct: 228 -SPSWSPDGARVAYVSFEAKKPV-VYVHDLASGK-RTLVSNQKGNNSAPSWSPDGRHLAL 284

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ +D    +Y V+   +   RL+ +  I+    YSPD   I F SDR G  Q+Y M ++
Sbjct: 285 ALSRDGNTQVYQVNADGSGIRRLSRSSAIDTEPQYSPDGKSIYFTSDRGGAPQVYRMPAS 344

Query: 335 ---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              G   +R++     +   P  SP G  +A+   +G  F + +          L + +N
Sbjct: 345 GEEGGGAQRVTFKGSYNV-SPRVSPDGKYLAYISRAGG-FKLQLQDLSNGDVTSLTDTAN 402

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVGFM 446
            +AP+++ +G+ ++++ +  G   + L ++  +GR   +++       +P W  FM
Sbjct: 403 DEAPSFAANGKYILYATRVGGR--AVLAAVSTDGRTRQVLSLQSGDVREPSWGPFM 456


>gi|325522835|gb|EGD01305.1| translocation protein TolB [Burkholderia sp. TJI49]
          Length = 431

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 190/443 (42%), Gaps = 18/443 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G     + +A V V       +   IA   F +   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGS----AANAQVNVLITGVGSTQFPIATANFANEAGLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I   S         +      W + GA   V G V +EG  + +V
Sbjct: 59  SIVRADLARSGKFTNIDAGS---TPVPETASVDLGAWKAKGANAFVAGSVNREGNGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++ ++ R   H I+D IYQ + G +G F +R+ +V +S   
Sbjct: 116 NFILYDTVKQQSLGGLSLTANDSTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKSGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNARIALSSTEPII-SPSWSPSGTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                 + + +    AP +S +G    +++       IY+V+       RLT +  I+  
Sbjct: 230 G-HRYIVSDQKGNNSAPAWSPDGNTLAVALSLTGNTQIYTVNSTGGGLRRLTQSSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+A+
Sbjct: 289 PYYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYN-TSPRVSPDGKLLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +G  F + V          +   +  ++P+++ +G+ ++++ +  G         D 
Sbjct: 348 ISRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYILYATQSGGRNVLAAVPSDG 407

Query: 424 NGRNETLINTPAYASDPQWVGFM 446
           +   + L        +P W  FM
Sbjct: 408 SAPPQILSVQGGSVREPSWGPFM 430


>gi|149375117|ref|ZP_01892889.1| Periplasmic component of the Tol biopolymer transport system
           [Marinobacter algicola DG893]
 gi|149360481|gb|EDM48933.1| Periplasmic component of the Tol biopolymer transport system
           [Marinobacter algicola DG893]
          Length = 427

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 110/432 (25%), Positives = 209/432 (48%), Gaps = 9/432 (2%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG--GKVSEVVSKDLQR 75
            LL++++      + HA + +       S + +A   F    ++    KVS +V  DL  
Sbjct: 3   WLLMLMVMIGSSPAAHAELLIRITEGADSAIPVAVVPFAETGQIPSGDKVSSIVRDDLTM 62

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  F  +  +      ++ D +  F+DW  LG + ++ G++ + G D++   + L+DV  
Sbjct: 63  SGEFKPLPPEKMLSLPSSGDEV-YFRDWRLLGQRYVLVGQLTRTG-DKIEARYELFDVNR 120

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            ++I+G    SS  S R +AH ISD +Y++ITG  G F++++ +V+     G     L V
Sbjct: 121 EERILGATASSSVNSTRSLAHHISDKVYEAITGVPGAFSTKLAYVTLQRSGGKALYRLQV 180

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG   R    S D+ +  P +SP+ +++AY +++      +Y+ +       K I +
Sbjct: 181 SDVDGKRARVRLES-DEPILSPAWSPDGKRLAYVSFETGKPA-IYIHELSSGNRTK-IAD 237

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           FR +  AP +S +G+  L+++ KD   ++Y +D+QS + +RLT+   I+   ++      
Sbjct: 238 FRGLNSAPAWSPDGRSLLLTLSKDGNAEVYKMDIQSRSLKRLTSHWSIDTEPTWDHTGKG 297

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             F SDR G  Q+Y   S  ++ +RI+     +   P     G  + +     + F I  
Sbjct: 298 FFFTSDRSGGPQIYHKSSESAEPRRITFGSRYNAR-PRPDNDGKYVYYVHQRDKAFHIAR 356

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                 +E +L    + ++P+ SP+GR LI++ K+ GD+   + + D  G   +L  +  
Sbjct: 357 TNLQTEEETILTRTESDESPSVSPNGRMLIYATKQGGDSVLTVIAADG-GAAYSLPASEG 415

Query: 436 YASDPQWVGFMD 447
              +P W   ++
Sbjct: 416 DVREPAWSPIVE 427


>gi|223673843|pdb|2W8B|B Chain B, Crystal Structure Of Processed Tolb In Complex With  Pal
 gi|223673844|pdb|2W8B|D Chain D, Crystal Structure Of Processed Tolb In Complex With  Pal
 gi|223673845|pdb|2W8B|F Chain F, Crystal Structure Of Processed Tolb In Complex With  Pal
          Length = 409

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 96/417 (23%), Positives = 186/417 (44%), Gaps = 13/417 (3%)

Query: 35  FVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
            V++  +S      P+ +   ++         +  +V+ DL+ S  FN + +    Q+  
Sbjct: 1   EVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPG 60

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSSPAS 150
           +   + +   W++LG   +V G+V         V ++L D        +    +  +   
Sbjct: 61  SAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQW 119

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++    
Sbjct: 120 LRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRS 177

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            Q L  P +SP+  K+AY T++        ++ T  + A +++ +F     AP FS +G 
Sbjct: 178 PQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANGAVRQVASFPRHNGAPAFSPDGS 235

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y 
Sbjct: 236 KLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +  NG   +RI+ +   +  D   S  G  +     +G +  I          ++L    
Sbjct: 296 VNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF 354

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
             + P+ +P+G  +I+S  +    GS L  +  +GR +  L  T      P W  ++
Sbjct: 355 LDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 409


>gi|71278150|ref|YP_268469.1| translocation protein TolB [Colwellia psychrerythraea 34H]
 gi|119371042|sp|Q484P6|TOLB_COLP3 RecName: Full=Protein tolB; Flags: Precursor
 gi|71143890|gb|AAZ24363.1| tolB protein [Colwellia psychrerythraea 34H]
          Length = 449

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 117/457 (25%), Positives = 208/457 (45%), Gaps = 31/457 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           MK+   ++   +  F      A +++       +  P++I    +    E    +S+V+S
Sbjct: 1   MKLLSNIVFGALIAFTSVKAMAALEIVITGGVDSARPIAIIPFNWTGTGERPELLSKVIS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F+ I+ D F Q I++  +I  +  W +LGA+ ++ G + +    R +V ++L
Sbjct: 61  DDLLRSGKFSPIAIDRFPQTISDAKAI-DYSAWANLGAEAVLLGNINEVAPGRYQVSYQL 119

Query: 131 WDVKDRKQIIGKKFFSSPASW--------------------RKIAHTISDDIYQSITGEK 170
            DV   +   G+    S                        R+ AH+IS+ IY+ +TG K
Sbjct: 120 VDVIRGQITGGETSMLSNGELVNPKDHILAQSSANIQLNQARRYAHSISNVIYEKLTGSK 179

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F S+I +V      G     L   D DG N   L  S++  L  P + PN  ++AY +
Sbjct: 180 GAFLSKIAYVIVR-DQGKYPYQLAFADYDGFNEHVLLSSKEP-LMSPSWHPNGDQLAYVS 237

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +++    +++ +D       K I +F  +  APRFS +GK   + + KD   D+Y ++L 
Sbjct: 238 FENRQA-QIHSIDIYTG-VRKSISSFNGINSAPRFSPDGKSMAMVLSKDGNPDLYVMELA 295

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +    R+T    I+   S++PD + ++F S+R GK QLY +   G   +R++ D E +  
Sbjct: 296 TMKLRRITRNRAIDTEPSWTPDGNSLIFSSERGGKPQLYRVDLAGGKVRRLTFDGEVNLG 355

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
             V +P G  +     +  K+ +   +      ++L E    ++P+ SP+G  +I+S   
Sbjct: 356 GSV-TPDGKQLIMVNRTRGKYRLAKQELSSGLFQVLTETRLDESPSVSPNGGMIIYSTLH 414

Query: 411 DGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           +      L S+D  GR +  L         P W  F+
Sbjct: 415 NNRQVLGLVSVD--GRFKARLPALDGQVKAPAWSPFL 449


>gi|326388397|ref|ZP_08209993.1| translocation protein TolB [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207129|gb|EGD57950.1| translocation protein TolB [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 478

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 141/411 (34%), Positives = 210/411 (51%), Gaps = 17/411 (4%)

Query: 48  VSIAFTKF------------VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           + IA   F             + + +G  ++ VV  DL+ + +F     DS         
Sbjct: 72  LGIAIPSFPTDRPVATGAEGGNTEAVGRNLARVVFNDLKFNGLFKPTGPDSLPGIAYAEV 131

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
           + P F  W +  A++LV G V      RL V   L+DV   +++  + +   P  WR+ A
Sbjct: 132 TAPAFSGWRARSAEMLVQGFVKGGADGRLTVGCYLYDVALGQELAREGYVVKPEDWRRAA 191

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H  +D +Y  ++GE   F+S+I +++E+      +  L +MD DGAN R++T  +     
Sbjct: 192 HKCADMVYSRLSGESPFFDSKIAYIAETGPKDHRRKQLAIMDSDGANHRFITNGQ-ATAL 250

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            PR+SP+  K+ Y +Y D    R+Y+ D       + +   +    APR+S +GK  L S
Sbjct: 251 TPRYSPDYSKILYLSYLDGRP-RIYVYDIGSGSQ-RLVTEGKGPTFAPRWSPDGKSILYS 308

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +      DIY V      +ERLTNT  INI  S+SPD  +IVFESDR G +Q+YVM S+G
Sbjct: 309 MAIAGNTDIYRVPASGGPSERLTNTPGINIGGSFSPDGRKIVFESDRSGSQQVYVMNSDG 368

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           S Q RIS         P WSP+GD IAFT  +G    + VM  DG+  R L +    +AP
Sbjct: 369 SGQHRISFFG-GRAATPEWSPRGDQIAFTHIAG-NLRVAVMDPDGNNLRYLTDSWQDEAP 426

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           TW+P+GR + F R +     + ++ +DL GRNE  + TP  ASDP W   +
Sbjct: 427 TWAPNGRIIQFFRTEKNTGHTSIWQVDLTGRNERRLKTPVDASDPAWGPVL 477


>gi|288940690|ref|YP_003442930.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Allochromatium vinosum DSM 180]
 gi|288896062|gb|ADC61898.1| Tol-Pal system beta propeller repeat protein TolB [Allochromatium
           vinosum DSM 180]
          Length = 436

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 106/435 (24%), Positives = 201/435 (46%), Gaps = 9/435 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL--GGKVSEVVS 70
           +  +L ++++++ G         + +       S   IA   F + + L     ++ ++ 
Sbjct: 7   LPRSLFVVVLILVGLGQALAAPRLNIEITGGIESAQPIAIVPFGTSEGLIPPVDMAAIIG 66

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL R+  F  +            + +  F+DW+ LG   LV GRV  +     R+ F L
Sbjct: 67  ADLARTGRFKPMPTRDMLDMPATREEV-DFRDWSLLGMNNLVIGRVEPDPTG-YRISFSL 124

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +DV    ++      S+ +  R+ AH I+D+I++ +TG+ G   +RI +++ +     + 
Sbjct: 125 FDVFRGTELASSSLVSTQSGMRQTAHRIADEIHEKLTGQPGVAATRIAYITSTGSGADLT 184

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L V D DG N + +  S +  L  P +SP+ Q++AY +++++    +Y+ +    R  
Sbjct: 185 VTLRVADADGYNPQTIVSSAEP-LMSPAWSPDGQRLAYVSFENKRAA-IYIQELSSGR-R 241

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + + +   +  +P FS +G R  +++ KD   DIYS++L S    RLT+   I+   S+S
Sbjct: 242 ELVASHPGINGSPAFSPDGSRLAMTLSKDGNPDIYSLNLLSRELTRLTDHYAIDTEPSWS 301

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   I+F SDR G  Q+Y M + G   +RIS + + +     ++P G  I         
Sbjct: 302 PDGQSIIFTSDRGGSPQIYRMAATGGPAERISVEGDYN-GRASYAPDGRSIVMVTRVNGA 360

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           F IG +       RLL      ++P+++P+G  +I++            S++  G  + L
Sbjct: 361 FRIGQLDLARGVTRLLSRGDLDESPSFAPNGAMVIYATIHGHRGVLATASVEGGGS-QRL 419

Query: 431 INTPAYASDPQWVGF 445
                   +P W   
Sbjct: 420 TQDSGQVREPAWSPL 434


>gi|223673842|pdb|2W8B|A Chain A, Crystal Structure Of Processed Tolb In Complex With  Pal
          Length = 409

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 95/417 (22%), Positives = 186/417 (44%), Gaps = 13/417 (3%)

Query: 35  FVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKIT 92
            V++  +S      P+ +   ++         +  +V+ DL+ S  FN + +    Q+  
Sbjct: 1   EVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPG 60

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSSPAS 150
           +   + +   W++LG   +V G+V         V ++L D        +    +  +   
Sbjct: 61  SAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQW 119

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++    
Sbjct: 120 LRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRS 177

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            Q L  P +SP+  K+AY T++        ++ T  + A +++ +F     AP FS +G 
Sbjct: 178 PQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANGAVRQVASFPRHNGAPAFSPDGS 235

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +   ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y 
Sbjct: 236 KLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +  NG   +RI+ +   +  D   S  G  +     +G +  I          ++L    
Sbjct: 296 VNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF 354

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
             + P+ +P+G  +++S  +    GS L  +  +GR +  L  T      P W  ++
Sbjct: 355 LDETPSLAPNGTMVLYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 409


>gi|145579533|pdb|2HQS|A Chain A, Crystal Structure Of TolbPAL COMPLEX
 gi|145579535|pdb|2HQS|B Chain B, Crystal Structure Of TolbPAL COMPLEX
 gi|145579537|pdb|2HQS|D Chain D, Crystal Structure Of TolbPAL COMPLEX
 gi|145579539|pdb|2HQS|F Chain F, Crystal Structure Of TolbPAL COMPLEX
          Length = 415

 Score =  372 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 96/416 (23%), Positives = 186/416 (44%), Gaps = 13/416 (3%)

Query: 36  VKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
           V++  +S      P+ +   ++         +  +V+ DL+ S  FN + +    Q+  +
Sbjct: 2   VRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGS 61

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSSPASW 151
              + +   W++LG   +V G+V         V ++L D        +    +  +    
Sbjct: 62  AQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWL 120

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++     
Sbjct: 121 RYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRSP 178

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           Q L  P +SP+  K+AY T++        ++ T  + A +++ +F     AP FS +G +
Sbjct: 179 QPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANGAVRQVASFPRHNGAPAFSPDGSK 236

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y +
Sbjct: 237 LAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 296

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             NG   +RI+ +   +  D   S  G  +     +G +  I          ++L     
Sbjct: 297 NINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFL 355

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            + P+ +P+G  +I+S  +    GS L  +  +GR +  L  T      P W  ++
Sbjct: 356 DETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 409


>gi|71275796|ref|ZP_00652080.1| TolB, N-terminal [Xylella fastidiosa Dixon]
 gi|71900395|ref|ZP_00682528.1| TolB, N-terminal [Xylella fastidiosa Ann-1]
 gi|71163374|gb|EAO13092.1| TolB, N-terminal [Xylella fastidiosa Dixon]
 gi|71729827|gb|EAO31925.1| TolB, N-terminal [Xylella fastidiosa Ann-1]
          Length = 474

 Score =  372 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 121/453 (26%), Positives = 218/453 (48%), Gaps = 16/453 (3%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKF--- 55
           S+ F    +L+M      L +L+G  FP S       + +     N +   IA       
Sbjct: 25  SIIFLKVIDLHMTKFPRWLAILVGLLFPLSALTQQQGLTIDIVGGNTAATPIAVLPMPYH 84

Query: 56  VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR 115
            S       VS VV+ DL RS  F  +      ++ T+   I RF  W +L    +V GR
Sbjct: 85  DSAGAPATDVSGVVAADLNRSGQFRTLPLGQITERPTHGSEI-RFPTWQALKQDYIVVGR 143

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V+   +   RVE+ L+DV++ K+++G    +  ++ R +AH ++D IY+ ITG +G F +
Sbjct: 144 VLDARQGTYRVEYELFDVRNGKRMLGLAMTARASAMRDVAHQMADAIYEKITGLRGAFFT 203

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI +V+ S   G ++ +L V D DG N + +  S +  L  P +SP+ +K+AY +++ + 
Sbjct: 204 RIAYVTASGSHGAMRYALMVADSDGYNPQTIVRSAEP-LLSPDWSPDGKKLAYVSFE-KG 261

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +Y+ D       + + +FR +  AP F+ +G R  +S+ +    +IY +DL S    
Sbjct: 262 GSSIYIQDIATGS-RELVSSFRGINAAPSFAPDGHRIALSLSRSGNPEIYVMDLVSKQLI 320

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +LTN+  I+    +S D   I F SDR G+ Q+Y + S G    R++     +    V S
Sbjct: 321 QLTNSFGIDTEPVWSSDGKFIYFTSDRGGRPQIYKVASVGGTATRVTFQGNYNATASV-S 379

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                I   + SG  + I +M +         L   S  ++P+++P+   ++++ ++ G 
Sbjct: 380 YDDKKIVVAQGSGNVYRIAMMDQSSGSTVWNTLSTGSLDESPSFAPNASMVLYAAREGGR 439

Query: 414 TGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
               LY++  + R  + L++  +   +P W  +
Sbjct: 440 G--VLYAVSADARVRQRLVSVDSDVREPAWGPY 470


>gi|189184452|ref|YP_001938237.1| TolB protein precursor [Orientia tsutsugamushi str. Ikeda]
 gi|226705887|sp|B3CUF6|TOLB_ORITI RecName: Full=Protein tolB; Flags: Precursor
 gi|189181223|dbj|BAG41003.1| TolB protein precursor [Orientia tsutsugamushi str. Ikeda]
          Length = 453

 Score =  372 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 149/415 (35%), Positives = 224/415 (53%), Gaps = 13/415 (3%)

Query: 38  VATNSANYSPVSIAFTKFVSID----ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
           +     N + + IA   F +       L   +  ++S DL  S +F  IS D F +    
Sbjct: 39  IKITKGNCTQIPIAINFFAAKSNEEHGLSQNIVSIISNDLNISKIFAPISSDLFIETEQG 98

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
              IP F  W+ + A +L+ G + K      +V F +WDV   K+I  K F      WR 
Sbjct: 99  VAHIPLFTAWSQINANILINGEITKIDSTDFKVTFVVWDVFSAKEITRKSFTFPSQLWRS 158

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            AH I+D IY+ +TG KG+FN++I++VSES  S      + +MD+DGAN  Y+T  ++ +
Sbjct: 159 TAHKIADQIYKHVTGSKGNFNTKIVYVSESNSSKGKIRRIAIMDQDGANHNYITNGKNHV 218

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  P FSPN  ++ Y +Y ++ I  V + D       K + +F  +  +PRFS +G + L
Sbjct: 219 I-TPVFSPNNNQILYVSYHNK-IPTVRIHDLNSGNN-KILASFNGITFSPRFSPDGNKIL 275

Query: 274 ISVQKDEA-MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +S    +    IY ++L +   ++LT    IN S SYSPD S+I F SDR G  Q+Y+M 
Sbjct: 276 VSNSSTKNVTHIYEINLLTGKIKQLTKGQSINTSPSYSPDGSKIAFVSDRSGSTQIYIMN 335

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             G + KR++  +  +Y  P WSP  + IAFTK    +F+IGV+K DGS +R++     +
Sbjct: 336 DQGGNIKRLTS-QPGAYTTPAWSPTNNYIAFTKIEAGEFSIGVIKLDGSNKRIIATKHLV 394

Query: 393 QAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           + P+W+P G+++IFSR     K   T  KLYS+D  G NE  I TP  ASDP W 
Sbjct: 395 EGPSWAPDGKTIIFSRAYKATKSTSTKVKLYSVDCTGYNEREIQTPENASDPNWS 449



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 10/182 (5%)

Query: 270 KRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            + +        K +   I  +D        +TN     I+  +SP+++QI++ S     
Sbjct: 180 TKIVYVSESNSSKGKIRRIAIMDQDGANHNYITNGKNHVITPVFSPNNNQILYVSYHNKI 239

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQER 384
             + +   N  + K I        F P +SP G+ I  +  S +    I  +     + +
Sbjct: 240 PTVRIHDLNSGNNK-ILASFNGITFSPRFSPDGNKILVSNSSTKNVTHIYEINLLTGKIK 298

Query: 385 LLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASDPQW 442
            L +  ++  +P++SP G  + F   + G T  ++Y + D  G  + L + P   + P W
Sbjct: 299 QLTKGQSINTSPSYSPDGSKIAFVSDRSGST--QIYIMNDQGGNIKRLTSQPGAYTTPAW 356

Query: 443 VG 444
             
Sbjct: 357 SP 358


>gi|90408530|ref|ZP_01216687.1| TolB protein [Psychromonas sp. CNPT3]
 gi|90310349|gb|EAS38477.1| TolB protein [Psychromonas sp. CNPT3]
          Length = 437

 Score =  372 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 97/431 (22%), Positives = 200/431 (46%), Gaps = 20/431 (4%)

Query: 29  PTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDS 86
            T   A + +       +  P+++   K++   E    ++ ++  DL+ S VF  I+ D 
Sbjct: 15  STQAFARLDILITEGVNSARPIAVIPFKWLGTGEKPQDIARIIGNDLRSSGVFRPIAIDK 74

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK-DRLRVEFRLWDVKDRKQ------- 138
                +  +++  +  W+ +G + +V G +    +  +  + + L +V            
Sbjct: 75  MPSTPSRSETL-DYALWHKMGVEAIVMGEIKPASEPGKYTITYELLNVLTGNMSIKGLSP 133

Query: 139 -IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
            +  ++   S   +R  AH ISD +Y+ +TGE+G F +RI +++    S      L + D
Sbjct: 134 VLEKRRSTLSATQFRHFAHRISDVVYEKLTGERGAFLTRIAYIAVDHRS-SHPYQLRIAD 192

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG   + +  S+  I   P +SP+ +K+ Y +++ +   ++Y+ D    +  + + +F 
Sbjct: 193 YDGYAEKLILRSKQPI-MSPAWSPDGRKLVYVSFEKKKS-QIYIQDIYT-QKRELMTSFP 249

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            +  AP +S +GK     + KD   +IY++++ S A +R+T    I+   S+SPD   ++
Sbjct: 250 RINGAPSWSPDGKMLSFVLSKDGQAEIYTMNVMSKALKRITQNRVIDTEPSWSPDGKSLL 309

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F S+R G+ Q+Y +  +    KR++ + + +      +P GD +     S  ++ I V  
Sbjct: 310 FTSERGGRPQIYQVDLSSMQTKRMTWEGDMNLGG-TITPDGDSLVLVSRSNGQYKISVQD 368

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAY 436
               + R L +    ++P+ +P+G  +I+S    G  G  L S+D  GR +  +      
Sbjct: 369 IASGELRTLTKTQLDESPSVAPNGSMIIYSTVYQGHKGLALVSMD--GRFKANIPAINGD 426

Query: 437 ASDPQWVGFMD 447
              P W  F++
Sbjct: 427 VKSPAWSPFLN 437


>gi|294626856|ref|ZP_06705448.1| translocation protein TolB precursor [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|294665411|ref|ZP_06730699.1| translocation protein TolB precursor [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292598870|gb|EFF43015.1| translocation protein TolB precursor [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292604822|gb|EFF48185.1| translocation protein TolB precursor [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 439

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 112/414 (27%), Positives = 208/414 (50%), Gaps = 11/414 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGG-KVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
           + +   SA+ +P+++    +          VS VV  DL RS  F  +      +K T  
Sbjct: 29  IDIVGGSASATPIAVIPMPYQGSGAAPQTDVSAVVGADLDRSGQFRTLPAAQIVEKPTRG 88

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
             + +FQ W +L    +V GRV+  G+   RVE+ L+DV   ++++G    +   + R +
Sbjct: 89  TEV-QFQTWRTLKQNYIVVGRVMDAGEGAYRVEYELFDVAKGERLLGLAMTARANAMRDV 147

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           +H ++D IY+ ITG +G F +RI +V+ S   G ++ +L V D DG N + +  S +  L
Sbjct: 148 SHQMADAIYEKITGVRGAFWTRIAYVTASGKGGAMRYALMVADSDGYNPQTIVRSAEP-L 206

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+ +K+AY +++  +   +YL D     A + + +FR +  AP FS +G+R  +
Sbjct: 207 LSPNWSPDGKKLAYVSFERGNS-SIYLQDIATG-ARELVSSFRGINGAPSFSPDGRRLAL 264

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ +    +IY +DL S    +LTN   I+   +++PD   I F SDR G+ Q+Y + ++
Sbjct: 265 ALSRSGNPEIYVMDLGSKQLTQLTNHFGIDTEPTWAPDGGSIYFTSDRGGRPQIYQVAAS 324

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNL 392
           G    R++     +    V S  G  IA  + SG  + I +M +         L   S  
Sbjct: 325 GGSANRVTFQGNYNATASV-SFDGKKIAVAQGSGNTYRIAMMDRSLGSPSWSTLSPGSLD 383

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
           ++P+++P+   ++++ ++ G     LY++  + R  + L+       +P W  +
Sbjct: 384 ESPSFAPNASMVLYAAREGGRG--VLYAVSSDARVRQRLVLADGDVREPAWGPY 435


>gi|187479385|ref|YP_787410.1| translocation protein TolB [Bordetella avium 197N]
 gi|119371036|sp|Q2KV91|TOLB_BORA1 RecName: Full=Protein tolB; Flags: Precursor
 gi|115423972|emb|CAJ50525.1| TolB protein [Bordetella avium 197N]
          Length = 441

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 195/418 (46%), Gaps = 15/418 (3%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
              HA ++V  +    +   IA   F   D  G  ++EV+  DL R+  F LI+      
Sbjct: 35  QPAHAQLRVDISGTGATQYPIAIADFAGDDVRGRALAEVIRADLTRTGQFRLINAAGSGL 94

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
            +   DS   + DW   GA  +  G + +    R  + +RL D   + Q+ G  F  +  
Sbjct: 95  TV---DSPINYDDWRGRGADYVAYGSISQGADGRFEIRYRLADTVKKNQLDGVAFSGTEP 151

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
             R+IAH I+D IY+ ITG +G F +RI +V +   +      L V D DG N +    S
Sbjct: 152 ELRRIAHQIADRIYEKITGVRGVFATRIAYVLKQGNT----YELQVADADGQNPQVALRS 207

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R+ I+  P +SP+  K+AY ++       V  + T   R+   + NF+    AP +S +G
Sbjct: 208 REPII-SPTWSPDGSKLAYVSFHSGKP--VVYVQTLATRSQIPVANFKGNNSAPAWSPDG 264

Query: 270 KRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +  +++ +D    IY V    +    R+T +  I+   +++PD   I+F SDR G  Q+
Sbjct: 265 SQLAVALTQDGLSQIYIVSADGSAKPRRITRSPGIDTEPTFTPDGRSIIFTSDRSGGPQI 324

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y +  +G D +R++ +   +   P  SP G  + +       F I  +      E LL +
Sbjct: 325 YQVGLDGGDARRLTFNGSYN-ISPRISPDGSTLLYVARRDGAFRIASLNLPTGTETLLTD 383

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
             + Q+P+++P+G  ++++  ++G   S L  +  +GR  +TL        +P W  F
Sbjct: 384 GRDDQSPSFAPNGMQVLYAATQNGR--SVLAGVSSDGRVRQTLSVLNGEIREPTWGPF 439


>gi|289207751|ref|YP_003459817.1| Tol-Pal system beta propeller repeat protein TolB [Thioalkalivibrio
           sp. K90mix]
 gi|288943382|gb|ADC71081.1| Tol-Pal system beta propeller repeat protein TolB [Thioalkalivibrio
           sp. K90mix]
          Length = 428

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 112/436 (25%), Positives = 203/436 (46%), Gaps = 12/436 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVS 70
           M+  +  +L  +   +     A ++V         + +A   F      EL   +S++V+
Sbjct: 1   MRRLIHWMLPAMLLLWAAQAQAVLEVTVTEGVTGAIPVAVAPFTYEGEGELDEDISQIVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            +L RS +FN + QD      + P        W   G + LV G   ++G D L VEF +
Sbjct: 61  ANLARSGLFN-VEQDDLPAAPSGPADFLA-GPWADAGVEYLVVGNQRRDGDDVL-VEFHV 117

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +DV   +++ G +        R+ AH ISD IY+ ITG+ G F++RI FVS        +
Sbjct: 118 FDVLSEERLGGWRIPVPGDMLRRGAHRISDIIYEQITGDPGAFSARIAFVSVERNGDERR 177

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L V D DGAN R L  S   I   P +SP+ +++ Y ++++     VY  +       
Sbjct: 178 FALEVADSDGANPRTLFRSAKPI-MSPDWSPDGRELVYVSFENRRS-EVYRQNVETGS-R 234

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +R+ +F  +  AP +S +G+   +S+ +D A +IY ++L++    ++T T  I     +S
Sbjct: 235 ERVASFTGINSAPAWSPDGRYLALSLSRDGAPNIYLMELETGEMRQMTQTRSIETEPVWS 294

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   + F SDR G  Q+Y +   G   +R++ +   +    V SP G  + +       
Sbjct: 295 PDGETLYFTSDRAGAPQIYALPREGGSPRRLTFESGYAAAATV-SPDGRYLVYVHGGDGG 353

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NET 429
           F +  +  +  +   L E  + ++P+++P+G  +I++    G     L S+  +G+ ++ 
Sbjct: 354 FQLARLDLNDRRVTRLTEGRDAESPSFAPNGSMIIYAMTDGGRG--VLGSVSQDGQVHQR 411

Query: 430 LINTPAYASDPQWVGF 445
           L        +P W   
Sbjct: 412 LAAREGEVREPAWSPL 427


>gi|221201006|ref|ZP_03574046.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           multivorans CGD2M]
 gi|221206542|ref|ZP_03579555.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           multivorans CGD2]
 gi|221214396|ref|ZP_03587367.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           multivorans CGD1]
 gi|221165653|gb|EED98128.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           multivorans CGD1]
 gi|221173851|gb|EEE06285.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           multivorans CGD2]
 gi|221178856|gb|EEE11263.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           multivorans CGD2M]
          Length = 431

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 190/443 (42%), Gaps = 18/443 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G     + +A V V       +   IA   F +   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGS----AANAQVNVLITGVGSTQFPIATANFANEAGLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I   S         +      W + GA   V G V +EG  + ++
Sbjct: 59  SIVRADLARSGKFTNIDAGS---TPVPETASVDLGAWKAKGANAFVAGSVNREGNGQYKI 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++   
Sbjct: 116 NFILYDTVKQQSLGGLSLSANDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G    +++       IYSV+       RLT +  I+  
Sbjct: 230 GRRY-MVSDQKGNNSAPAWSPDGNTLAVALSLTGNTQIYSVNSNGGGLRRLTQSSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+A+
Sbjct: 289 PFYSPDGHWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYN-TSPRVSPDGKLLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +G  F + V          +   +  ++P+++ +G+ ++++ +  G         D 
Sbjct: 348 ISRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYILYATQSGGRNVLAAVPSDG 407

Query: 424 NGRNETLINTPAYASDPQWVGFM 446
           +   + L        +P W  FM
Sbjct: 408 SAPPQILSVQGGSVREPSWGPFM 430


>gi|21232448|ref|NP_638365.1| translocation protein TolB [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767469|ref|YP_242231.1| translocation protein TolB [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188990575|ref|YP_001902585.1| translocation protein TolB [Xanthomonas campestris pv. campestris
           str. B100]
 gi|32699705|sp|Q8P6F2|TOLB_XANCP RecName: Full=Protein tolB; Flags: Precursor
 gi|81306551|sp|Q4UXL2|TOLB_XANC8 RecName: Full=Protein tolB; Flags: Precursor
 gi|226705898|sp|B0RPZ2|TOLB_XANCB RecName: Full=Protein tolB; Flags: Precursor
 gi|21114229|gb|AAM42289.1| TolB protein [Xanthomonas campestris pv. campestris str. ATCC
           33913]
 gi|66572801|gb|AAY48211.1| TolB protein [Xanthomonas campestris pv. campestris str. 8004]
 gi|167732335|emb|CAP50527.1| TolB protein [Xanthomonas campestris pv. campestris]
          Length = 439

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 112/422 (26%), Positives = 210/422 (49%), Gaps = 11/422 (2%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGG-KVSEVVSKDLQRSDVFNLISQDS 86
           F       + +   SA+ +P+++    +          VS VVS DL RS  F  +    
Sbjct: 21  FAQQQGLTIDIVGGSASATPITVVPMPYQGSGTAPQTDVSAVVSADLDRSGQFRTLPAAQ 80

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS 146
             +K T    + +FQ W +L    +V GRV+  G+   RVE+ L+DV   ++++G    +
Sbjct: 81  IVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMDAGEGAYRVEYELFDVAKGERLLGLAMTA 139

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
              + R ++H ++D IY+ +TG +G F +RI +V+ S   G ++ +L V D DG N + +
Sbjct: 140 RANAMRDVSHQMADAIYEKVTGVRGAFWTRIAYVTASGSGGSMRYALMVADSDGYNPQTI 199

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S +  L  P +SP+ +K+AY +++  +   +YL D     A + + +FR +  AP FS
Sbjct: 200 VRSAEP-LLSPNWSPDGKKLAYVSFERGNS-SIYLQDIASG-ARELVSSFRGINGAPSFS 256

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+R  +++ +    +IY +DL S    +LTN   I+   +++PD   I F SDR G+ 
Sbjct: 257 PDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGIDTEPTWAPDGGSIYFTSDRGGRP 316

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--R 384
           Q+Y + ++G    R++     +    V S  G  +A  + SG  + I +M +        
Sbjct: 317 QIYQVAASGGSANRVTFQGNYNATASV-SFDGKKVAVAQGSGNTYRIAMMDRSLGSPSWS 375

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWV 443
            L   S  ++P+++P+   ++++ ++ G     LY++  + R  + L+       +P W 
Sbjct: 376 TLSPGSLDESPSFAPNASMVLYAAREGGRG--VLYAVSADARVRQRLVLADGDVREPAWG 433

Query: 444 GF 445
            +
Sbjct: 434 PY 435


>gi|148284009|ref|YP_001248099.1| protein precursor [Orientia tsutsugamushi str. Boryong]
 gi|226705886|sp|A5CBX4|TOLB_ORITB RecName: Full=Protein tolB; Flags: Precursor
 gi|146739448|emb|CAM79084.1| protein precursor [Orientia tsutsugamushi str. Boryong]
          Length = 453

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 148/415 (35%), Positives = 224/415 (53%), Gaps = 13/415 (3%)

Query: 38  VATNSANYSPVSIAFTKFVSID----ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
           +     N + + IA   F +      +L   +  ++S DL  S +F  IS D F +    
Sbjct: 39  IKITKGNCTQIPIAINFFSAKSNEEHDLSQNIVSIISNDLNISKIFAPISSDLFIETEQG 98

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
              IP F  W+ + A +L+ G + K      +V F +WDV   K+I  K F      WR 
Sbjct: 99  VAHIPLFTAWSQINANILINGEITKIDSTDFKVTFVIWDVFSAKEITRKSFTFPSQLWRS 158

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            AH I+D IY+ +TG KG+FN++I++VSES  S      + +MD+DGAN  Y+T  ++ +
Sbjct: 159 TAHKIADQIYKHVTGSKGNFNTKIVYVSESNSSNRKIRRIAIMDQDGANHNYITNGKNHV 218

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  P FSP   ++ Y +Y ++ I  V + D       K + +F  +  +PRFS +G + L
Sbjct: 219 I-TPVFSPKNNQILYVSYHNK-IPTVRIHDLNSGNN-KILASFNGITFSPRFSPDGNKIL 275

Query: 274 ISVQKDEA-MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +S    +    IY ++L +   ++LT    IN S SYSPD S+I F SDR G  Q+Y+M 
Sbjct: 276 VSNSSTKNVTHIYEINLLTGKIKQLTKGQSINTSPSYSPDGSKIAFVSDRSGSTQIYIMN 335

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             G + KR++  +  +Y  P WSP  + IAFTK    +F+IGV+K DGS +R++     +
Sbjct: 336 DQGGNIKRLTS-QPGAYTTPAWSPTNNYIAFTKIEAGEFSIGVIKLDGSNKRIIATKYLV 394

Query: 393 QAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           + P+W+P G+++IFSR     K   T  KLYS+D  G NE  I TP  ASDP W 
Sbjct: 395 EGPSWAPDGKTIIFSRAYKATKSTSTKVKLYSVDYTGYNEREIQTPENASDPNWS 449



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 73/182 (40%), Gaps = 10/182 (5%)

Query: 270 KRALISVQKDEA----MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            + +   + + +      I  +D        +TN     I+  +SP ++QI++ S     
Sbjct: 180 TKIVYVSESNSSNRKIRRIAIMDQDGANHNYITNGKNHVITPVFSPKNNQILYVSYHNKI 239

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQER 384
             + +   N  + K I        F P +SP G+ I  +  S +    I  +     + +
Sbjct: 240 PTVRIHDLNSGNNK-ILASFNGITFSPRFSPDGNKILVSNSSTKNVTHIYEINLLTGKIK 298

Query: 385 LLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASDPQW 442
            L +  ++  +P++SP G  + F   + G T  ++Y + D  G  + L + P   + P W
Sbjct: 299 QLTKGQSINTSPSYSPDGSKIAFVSDRSGST--QIYIMNDQGGNIKRLTSQPGAYTTPAW 356

Query: 443 VG 444
             
Sbjct: 357 SP 358


>gi|148261881|ref|YP_001236008.1| TolB domain-containing protein [Acidiphilium cryptum JF-5]
 gi|146403562|gb|ABQ32089.1| TolB, N-terminal domain protein [Acidiphilium cryptum JF-5]
          Length = 469

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 164/450 (36%), Positives = 254/450 (56%), Gaps = 20/450 (4%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAF-------VKVATNSANYSPVSIAFTKFV----SIDE 60
            +   L +     G   P    A          +  + A+ +P+ IA   F     +  +
Sbjct: 24  PLSRRLMIGAGAAGLLLPGLARAQNAANGPSDAINVSGAHNAPIPIALPAFTDASGNTSD 83

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           +G ++++VV+ DL    +F+ I   SF    +  +S+P + +W+ LGAQ LVTG+V   G
Sbjct: 84  IGAQITQVVTSDLDHCGLFSAIDPTSFV-PNSVVNSVPVWNNWSILGAQALVTGQVTSPG 142

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
             ++RVE+RLW +  +KQ+ G  + ++  +WR+IAH I+DDIYQ + GEKG F++R+ F+
Sbjct: 143 AGQIRVEYRLWGISQQKQLQGTAYTTASGNWRRIAHIIADDIYQQMIGEKGYFDTRVAFI 202

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S S         + +MD DGAN+R+LT  R+ +   P+F+P +Q++A+ ++++    +VY
Sbjct: 203 SVSGPPTSPIRRMALMDYDGANVRFLTSGRN-MALSPQFNPTRQQLAFVSFENNRP-QVY 260

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L D +   A   IG+F  M   PRFS +G   L S+ K     I   DL S    +LT+ 
Sbjct: 261 LFDLQTG-ARTNIGSFGDMSFGPRFSPDGSALLFSISKGGGAMIVKYDLGSRRMTQLTDA 319

Query: 301 LFINISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             IN++  YSPD ++IVF SDR+G   +QL+VM ++GS+ +RIS    A Y +P WSP+G
Sbjct: 320 NSINVTPCYSPDGTKIVFNSDRDGSGDQQLFVMNADGSNVQRISY-GHARYAEPDWSPRG 378

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG--S 416
           D IAFT+     F IGVMK DGS ERLL +    +  T+ P+GR ++F R+     G  S
Sbjct: 379 DAIAFTRLDSSGFGIGVMKPDGSGERLLSQGYLEEGATFCPNGRVIMFYRQSPLRVGNVS 438

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            L +I ++G NE +  TP  A DP W   +
Sbjct: 439 HLVTIGVDGFNERITPTPTNAEDPSWGPRL 468


>gi|170701073|ref|ZP_02892050.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           ambifaria IOP40-10]
 gi|172059754|ref|YP_001807406.1| translocation protein TolB [Burkholderia ambifaria MC40-6]
 gi|226705867|sp|B1YTW7|TOLB_BURA4 RecName: Full=Protein tolB; Flags: Precursor
 gi|170134013|gb|EDT02364.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           ambifaria IOP40-10]
 gi|171992271|gb|ACB63190.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           ambifaria MC40-6]
          Length = 431

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 107/445 (24%), Positives = 189/445 (42%), Gaps = 18/445 (4%)

Query: 5   FFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK 64
             +  +L  +  +   L+  GG    + +A V V       +   IA   F +   L  +
Sbjct: 1   MRLMTKLGFRALVASCLIAAGG----AANAQVNVLITGVGSTQFPIATANFANEAGLPQQ 56

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           V+ +V  DL RS  F  I   S         +      W + GA   V G V +E   + 
Sbjct: 57  VTSIVRADLARSGKFTNIDAGS---TPVPETASVDLGAWKAKGANAFVAGSVNREANGQY 113

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           +V F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++ 
Sbjct: 114 KVNFILYDTVKQQSLGGLSLTATDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTG 173

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D 
Sbjct: 174 N----RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDL 227

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    + + +    AP +S +     +++       IY+V+       RLT +  I+
Sbjct: 228 PTGRRY-MVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNANGGGLRRLTQSSSID 286

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLI 361
               YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+
Sbjct: 287 TEPYYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYN-TSPRISPDGKLL 345

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A+   +G  F + V          +   +  ++P+++ +G+ L+++ +  G         
Sbjct: 346 AYISRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYLLYATQSGGRNVLAAVPS 405

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D +   + L        +P W  FM
Sbjct: 406 DGSAPPQILSVQGGSVREPSWGPFM 430


>gi|260219498|emb|CBA26343.1| Protein tolB [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 408

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 105/419 (25%), Positives = 186/419 (44%), Gaps = 15/419 (3%)

Query: 27  FFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDS 86
                  A  +V  +    + + +A   F   D+   K++ +V  DL+RS  F  +   S
Sbjct: 1   MAALQAQAQFRVEVSGVGMTQIPVAIAAFRGEDQSPQKIAAIVQADLERSGQFKGVESGS 60

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS 146
                 +  + P        GA  LV G V +    R  V FRLWDV   + + G+    
Sbjct: 61  ----GLDESARPDLNVMRQRGADALVAGSVTRLADGRFDVRFRLWDVVRNQDLGGQSHAV 116

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
            P   R  AH I+D +Y+ +TG+KG F++RI +V+++  +     +L V D DG N +  
Sbjct: 117 LPGDLRLAAHRIADFVYERLTGDKGVFSTRISYVTKAGPT----YNLWVADADGENAQSA 172

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S + I+  P ++PN  ++AY +++    + VY+ D    R  + + +F+    AP +S
Sbjct: 173 LSSPEPII-SPSWAPNGNQLAYVSFEARKPV-VYVHDVATGR-RRLVASFKGSNSAPTWS 229

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+   +++ +D    +Y +D       RL  +  I+    Y+ D   I F SDR G  
Sbjct: 230 PDGRSIALTLSRDGGSQLYVMDANGGEPRRLMQSPAIDTEPVYTSDGKTIYFVSDRGGSP 289

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Q+Y + + G   +R++     +   P  SP G  +A+       F + VM         +
Sbjct: 290 QIYRVPAGGGSAERVTFSGGYN-ISPALSPDGKWLAYVSRVNGAFKLHVMDIVSGSVSAI 348

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
            + +  + P++SP+ R +I++    G     L +  L+GR    L        +P W  
Sbjct: 349 TDKAADENPSFSPNSRLIIYAILLQGK--EALMTTTLDGRIKARLAGQGGDIREPDWGP 405



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 77/185 (41%), Gaps = 11/185 (5%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R     +     +++  D      +   ++    IS S++P+ +Q+ + S    K  +Y
Sbjct: 145 TRISYVTKAGPTYNLWVADADGENAQSALSSPEPIISPSWAPNGNQLAYVSFEARKPVVY 204

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V       ++R+    + S   P WSP G  IA T        + VM  +G + R L++ 
Sbjct: 205 VHDVATG-RRRLVASFKGSNSAPTWSPDGRSIALTLSRDGGSQLYVMDANGGEPRRLMQS 263

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQ 441
             +   P ++  G+++ F   + G    ++Y +   G +   +        +PA + D +
Sbjct: 264 PAIDTEPVYTSDGKTIYFVSDRGGS--PQIYRVPAGGGSAERVTFSGGYNISPALSPDGK 321

Query: 442 WVGFM 446
           W+ ++
Sbjct: 322 WLAYV 326


>gi|21243868|ref|NP_643450.1| translocation protein TolB [Xanthomonas axonopodis pv. citri str.
           306]
 gi|78048828|ref|YP_365003.1| translocation protein TolB [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|325929357|ref|ZP_08190487.1| tol-pal system beta propeller repeat protein TolB [Xanthomonas
           perforans 91-118]
 gi|32699706|sp|Q8PHV7|TOLB_XANAC RecName: Full=Protein tolB; Flags: Precursor
 gi|119371066|sp|Q3BQG0|TOLB_XANC5 RecName: Full=Protein tolB; Flags: Precursor
 gi|21109469|gb|AAM37986.1| TolB protein [Xanthomonas axonopodis pv. citri str. 306]
 gi|78037258|emb|CAJ25003.1| biopolymer transport TolB protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|325540269|gb|EGD11881.1| tol-pal system beta propeller repeat protein TolB [Xanthomonas
           perforans 91-118]
          Length = 439

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 112/414 (27%), Positives = 208/414 (50%), Gaps = 11/414 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGG-KVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
           + +   SA+ +P+++    +          VS VV  DL RS  F  +      +K T  
Sbjct: 29  IDIVGGSASATPIAVIPMPYQGSGTAPQTDVSAVVGADLDRSGQFRTLPAAQIVEKPTRG 88

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
             + +FQ W +L    +V GRV+  G+   RVE+ L+DV   ++++G    +   + R +
Sbjct: 89  TEV-QFQTWRTLKQNYIVVGRVMDAGEGAYRVEYELFDVAKGERMLGLAMTARANAMRDV 147

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           +H ++D IY+ ITG +G F +RI +V+ S   G ++ +L V D DG N + +  S +  L
Sbjct: 148 SHQMADAIYEKITGVRGAFWTRIAYVTASGKGGAMRYALMVADSDGYNPQTIVRSAEP-L 206

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+ +K+AY +++  +   +YL D     A + + +FR +  AP FS +G+R  +
Sbjct: 207 LSPNWSPDGKKLAYVSFERGNS-SIYLQDIATG-ARELVSSFRGINGAPSFSPDGRRLAL 264

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ +    +IY +DL S    +LTN   I+   +++PD   I F SDR G+ Q+Y + ++
Sbjct: 265 ALSRSGNPEIYVMDLGSKQLTQLTNHFGIDTEPTWAPDGGSIYFTSDRGGRPQIYQVAAS 324

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNL 392
           G    R++     +    V S  G  IA  + SG  + I +M +         L   S  
Sbjct: 325 GGSANRVTFQGNYNATASV-SFDGKKIAVAQGSGNTYRIAMMDRSLGSPSWSTLSPGSLD 383

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
           ++P+++P+   ++++ ++ G     LY++  + R  + L+       +P W  +
Sbjct: 384 ESPSFAPNASMVLYAAREGGRG--VLYAVSSDARVRQRLVLADGDVREPAWGPY 435


>gi|161525756|ref|YP_001580768.1| translocation protein TolB [Burkholderia multivorans ATCC 17616]
 gi|189349522|ref|YP_001945150.1| translocation protein TolB [Burkholderia multivorans ATCC 17616]
 gi|226705870|sp|A9AFQ0|TOLB_BURM1 RecName: Full=Protein tolB; Flags: Precursor
 gi|160343185|gb|ABX16271.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           multivorans ATCC 17616]
 gi|189333544|dbj|BAG42614.1| TolB protein [Burkholderia multivorans ATCC 17616]
          Length = 431

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 189/443 (42%), Gaps = 18/443 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G     + +A V V       +   IA   F +   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGS----AANAQVNVLITGVGSTQFPIATANFANEAGLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I   S         +      W + GA   V G V  EG  + ++
Sbjct: 59  SIVRADLARSGKFTNIDAGS---TPVPETASVDLGAWKAKGANAFVAGSVNHEGNGQYKI 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++   
Sbjct: 116 NFILYDTVKQQSLGGLSLSANDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +G    +++       IYSV+       RLT +  I+  
Sbjct: 230 GRRY-MVSDQKGNNSAPAWSPDGNTLAVALSLTGNTQIYSVNSNGGGLRRLTQSSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+A+
Sbjct: 289 PFYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYN-TSPRVSPDGKLLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +G  F + V          +   +  ++P+++ +G+ ++++ +  G         D 
Sbjct: 348 ISRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYILYATQSGGRNVLAAVPSDG 407

Query: 424 NGRNETLINTPAYASDPQWVGFM 446
           +   + L        +P W  FM
Sbjct: 408 SAPPQILSVQGGSVREPSWGPFM 430


>gi|119477235|ref|ZP_01617471.1| translocation protein TolB precursor [marine gamma proteobacterium
           HTCC2143]
 gi|119449598|gb|EAW30836.1| translocation protein TolB precursor [marine gamma proteobacterium
           HTCC2143]
          Length = 429

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 102/434 (23%), Positives = 207/434 (47%), Gaps = 12/434 (2%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSP--VSIAFTKFVSIDELGGKVSEVVSKDLQR 75
             L+V       + + A + +       +P  ++I    +         V+ ++  DLQR
Sbjct: 4   IALIVFTLMALTSQVSAQLIIEITKGVDNPTAIAIVPFGWEGGGIPKEDVATIIETDLQR 63

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           +  F+ + ++       +   +  F+DW +L    L+ G+++   +  L+ E+ L+DV  
Sbjct: 64  TGQFSPVPKEDMLSTPQDKSEV-YFRDWRALNVDYLLVGKLVPTAEG-LQAEYALFDVYT 121

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG-IIKNSLC 194
           +  ++  +   S  S R IAH ISD +YQ +TG +G F++++L+VS            L 
Sbjct: 122 QALVLEDRQTGSAESLRDIAHGISDRVYQKLTGIRGAFSTKLLYVSAVGRGDAQYTYRLL 181

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D DGA  R +  S++ I   P +SP+ + +AY +++      +Y  + R +   + + 
Sbjct: 182 ISDVDGARERIIFESQEPI-LTPSWSPDGETIAYVSFETTRPA-IYSHNLRTNERSQ-LT 238

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           NF+ +  AP +S +GK+  + + KD + DIY + + +   +R+T    I+   S+ PD  
Sbjct: 239 NFKGLNGAPAWSPDGKQLAMVLSKDGSPDIYIMTVATRELKRVTRHFAIDTEPSWMPDGK 298

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +V+ SDR GK Q+Y +      ++R++ +   +    V  P G  I     S  +  I 
Sbjct: 299 SLVYTSDRGGKPQIYQVTLASGYEERVTFEGSYNAKAKVV-PAGGGIIMVHRSMGRDHIA 357

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           ++  +  +  +L E    ++P+ +P+G  L+++ K  G     L ++ L+G  +  + + 
Sbjct: 358 LLDIERGKINILTETDLDESPSIAPNGAILLYATKVRGKG--VLAAVSLDGGTKYFMPSR 415

Query: 435 -AYASDPQWVGFMD 447
                +P W  F++
Sbjct: 416 FGDVREPAWSPFLN 429


>gi|326405385|ref|YP_004285467.1| protein TolB [Acidiphilium multivorum AIU301]
 gi|325052247|dbj|BAJ82585.1| protein TolB [Acidiphilium multivorum AIU301]
          Length = 469

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 164/450 (36%), Positives = 254/450 (56%), Gaps = 20/450 (4%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAF-------VKVATNSANYSPVSIAFTKFV----SIDE 60
            +   L +     G   P    A          +  + A+ +P+ IA   F     +  +
Sbjct: 24  PLSRRLMIGAGAAGLMLPGLARAQNAANGPSDAINVSGAHNAPIPIALPAFTDASGNTSD 83

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           +G ++++VV+ DL    +F+ I   SF    +  +S+P + +W+ LGAQ LVTG+V   G
Sbjct: 84  IGAQITQVVTSDLDHCGLFSAIDPTSFV-PNSVVNSVPVWNNWSILGAQALVTGQVTSPG 142

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
             ++RVE+RLW +  +KQ+ G  + ++  +WR+IAH I+DDIYQ + GEKG F++R+ F+
Sbjct: 143 AGQIRVEYRLWGISQQKQLQGTAYTTASGNWRRIAHIIADDIYQQMIGEKGYFDTRVAFI 202

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S S         + +MD DGAN+R+LT  R+ +   P+F+P +Q++A+ ++++    +VY
Sbjct: 203 SVSGPPTSPIRRMALMDYDGANVRFLTSGRN-MALSPQFNPTRQQLAFVSFENNRP-QVY 260

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L D +   A   IG+F  M   PRFS +G   L S+ K     I   DL S    +LT+ 
Sbjct: 261 LFDLQTG-ARTNIGSFGDMSFGPRFSPDGSALLFSISKGGGAMIVKYDLGSRRMTQLTDA 319

Query: 301 LFINISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             IN++  YSPD ++IVF SDR+G   +QL+VM ++GS+ +RIS    A Y +P WSP+G
Sbjct: 320 NSINVTPCYSPDGTKIVFNSDRDGSGDQQLFVMNADGSNVQRISY-GHARYAEPDWSPRG 378

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG--S 416
           D IAFT+     F IGVMK DGS ERLL +    +  T+ P+GR ++F R+     G  S
Sbjct: 379 DAIAFTRLDSSGFGIGVMKPDGSGERLLSQGYLEEGATFCPNGRVIMFYRQSPLRVGNVS 438

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            L +I ++G NE +  TP  A DP W   +
Sbjct: 439 HLVTIGVDGFNERITPTPTNAEDPSWGPRL 468


>gi|206561547|ref|YP_002232312.1| translocation protein TolB [Burkholderia cenocepacia J2315]
 gi|226705869|sp|B4EDC0|TOLB_BURCJ RecName: Full=Protein tolB; Flags: Precursor
 gi|198037589|emb|CAR53527.1| putative periplasmic TolB protein [Burkholderia cenocepacia J2315]
          Length = 431

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 188/443 (42%), Gaps = 18/443 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G     + +A V V       +   IA   F +   L  +V+
Sbjct: 3   LMTKLGFRALVASCLITAGS----AANAQVNVLITGVGSTQFPIATANFTNEANLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I   S         +      W + GA   V G V +E   + +V
Sbjct: 59  SIVRADLARSGKFTNIDAGS---TPVPETASVDLGAWKAKGANAFVAGSVNREANGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++   
Sbjct: 116 NFILYDTVKQQSLGGLSLTATDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +     +++       IY+V+       RLT +  I+  
Sbjct: 230 GRRY-MVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNANGGGLRRLTQSSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+A+
Sbjct: 289 PFYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYN-TSPRVSPDGKLLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +G  F + V          +   +  ++P+++ +G+ L+++ +  G         D 
Sbjct: 348 ISRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYLLYATQSGGRNVLAAVPSDG 407

Query: 424 NGRNETLINTPAYASDPQWVGFM 446
           +   + L        +P W  FM
Sbjct: 408 SAPPQILSVQGGSVREPSWGPFM 430


>gi|90417116|ref|ZP_01225044.1| translocation protein TolB precursor [marine gamma proteobacterium
           HTCC2207]
 gi|90331132|gb|EAS46388.1| translocation protein TolB precursor [marine gamma proteobacterium
           HTCC2207]
          Length = 440

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 101/418 (24%), Positives = 192/418 (45%), Gaps = 7/418 (1%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFV-SIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
           +  +  + +     N  P  IA         +    +S +V  DL RS +F  + +    
Sbjct: 28  SPSYGELVIRVTQGNDQPTKIAIAPIAMGGIQSSEDISAIVEADLARSGLFAPMERRDML 87

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
              ++   +  ++DW  LGA+ LV G +    + R ++EF L +V  +K ++  K   + 
Sbjct: 88  AFPSSASEV-YYRDWRLLGAEYLVAGNMRAISEGRYQIEFSLLNVSGQKTVLTHKVSGTS 146

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           +  R +AH ISD +Y+ ITG +G F++R+ +V+ + ++ +    L V D DGA  + +  
Sbjct: 147 SQMRDLAHLISDKVYEEITGIRGAFSTRLAYVTATRINDVYTYRLNVADADGAREKLVLE 206

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           S + I   P +S N +++AY +++             +    +++ NF  +  AP +S +
Sbjct: 207 SGEPI-MSPAWSANGKELAYVSFETGRP--AIFRQNLVTAQREQLTNFTGLNGAPSWSPD 263

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           GK+  + + KD   ++Y +DLQ+    RLT    I+   ++ PD   ++F SDR G  Q+
Sbjct: 264 GKKMALVLSKDGNPELYLLDLQTKKFSRLTRHFAIDTEPTWMPDGKHLLFTSDRGGTPQI 323

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y +       +R++     +   P  +P G  +A      + F I        +   L E
Sbjct: 324 YKLNIASKATERLTFSGNYNAR-PSLAPDGRTMAMVHRQRDTFHIASFDLKTGRMIELTE 382

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
               ++PT +P+G  L+++ K+         S+D  G    L ++     +P W  F+
Sbjct: 383 TRLDESPTVAPNGAMLMYATKQGDRGVLAAVSLDA-GVRYVLPSSSGDVREPAWSPFL 439


>gi|311694926|gb|ADP97799.1| translocation protein TolB precursor [marine bacterium HP15]
          Length = 437

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 105/448 (23%), Positives = 209/448 (46%), Gaps = 14/448 (3%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M+ R +      +     L+      F  ++  A + +       S + +A   F    +
Sbjct: 1   MTHRIWHKPSRTLLAATALIF-----FAVSAARAELLIRITEGADSAIPVAVVPFAESGQ 55

Query: 61  LGG--KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
           +    KVS +V  DL  +  F  +  +      +  + +  F+DW  LG + ++ G + +
Sbjct: 56  MPAGDKVSSIVQADLTMTGEFRTLPPEKMLSLPSRREEV-YFRDWRLLGQRYVLVGALSR 114

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
            G DR++  + L+DV   ++I+G+   +  ++ R +AH ISD +Y++ITG  G F++++ 
Sbjct: 115 SG-DRVQARYELFDVNREERILGETAAAPASNMRSLAHHISDKVYEAITGVPGAFSTKLA 173

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +++    +G  +  L V D DG   R    S++ I   P +SP+ +K+AY +++      
Sbjct: 174 YITLDTANGKPRYRLQVSDVDGKRARIRLESQEPI-LSPAWSPDGEKLAYVSFETGKP-- 230

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V  +         ++ +F  +  AP +S +G+  L+++ KD   +IY ++L +    +LT
Sbjct: 231 VIFVHELATGNRTKVADFPGLNSAPAWSDDGRSLLMTLSKDGNAEIYRMNLDTRQLTKLT 290

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           N   I+   SY      I F SDR G  Q+Y M + G++ +RI+     +   P     G
Sbjct: 291 NHWAIDTEPSYDATGKGIFFTSDRSGGPQIYHMDTPGAEPRRITFGSRYNAR-PRPDNDG 349

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           + + +       F I   +    +E +L    + ++P+ +P+GR LI++ +++G     +
Sbjct: 350 NYVYYVHQRDRAFHIARTELKTGEETILTRTESDESPSVAPNGRMLIYATRQNGSNVLTV 409

Query: 419 YSIDLNGRNETLINTPAYASDPQWVGFM 446
            S D  G   +L  +     +P W   +
Sbjct: 410 ISADG-GAAYSLPASEGDVREPAWGPLV 436


>gi|170732122|ref|YP_001764069.1| translocation protein TolB [Burkholderia cenocepacia MC0-3]
 gi|226705868|sp|B1JWH3|TOLB_BURCC RecName: Full=Protein tolB; Flags: Precursor
 gi|169815364|gb|ACA89947.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           cenocepacia MC0-3]
          Length = 431

 Score =  370 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 188/443 (42%), Gaps = 18/443 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G     + +A V V       +   IA   F +   L  +++
Sbjct: 3   LMTKLGFRALVASCLITAGS----AANAQVNVLITGVGSTQFPIATANFTNEANLPQQIT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I   S         +      W + GA   V G V ++   + +V
Sbjct: 59  SIVRADLARSGKFTNIDAGS---TPVPETASVDLGAWKAKGANAFVAGSVNRDANGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++   
Sbjct: 116 NFILYDTVKQQSLGGLSLTATDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +     +++       IY+V+       RLT +  I+  
Sbjct: 230 GRRY-MVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNANGGGLRRLTQSSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+A+
Sbjct: 289 PFYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYN-TSPRVSPDGKLLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +G  F + V          +   +  ++P+++ +G+ L+++ +  G         D 
Sbjct: 348 ISRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYLLYATQSGGRNVLAAVPSDG 407

Query: 424 NGRNETLINTPAYASDPQWVGFM 446
           +   + L        +P W  FM
Sbjct: 408 SAPPQILSVQGGSVREPSWGPFM 430


>gi|309786419|ref|ZP_07681045.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           dysenteriae 1617]
 gi|308925813|gb|EFP71294.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           dysenteriae 1617]
          Length = 405

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 94/412 (22%), Positives = 185/412 (44%), Gaps = 11/412 (2%)

Query: 38  VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI 97
           + +   +  P+ +   ++         +  +V+ DL+ S  FN + +    Q+  +   +
Sbjct: 2   IDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEV 61

Query: 98  PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIA 155
            +   W++LG   +V G+V         V ++L D        +    +  +    R  +
Sbjct: 62  -QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAS 120

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++     Q L 
Sbjct: 121 HTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLM 178

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +SP+  K+AY T++        ++ T  + A +++ +F     AP FS +G +   +
Sbjct: 179 SPAWSPDGSKLAYVTFESGR--SALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFA 236

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y +  NG
Sbjct: 237 LSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 296

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              +RI+ +   +  D   S  G  +     +G +  I          ++L      + P
Sbjct: 297 GAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETP 355

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           + +P+G  +I+S  +    GS L  +  +GR +  L  T      P W  ++
Sbjct: 356 SLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 405


>gi|332097645|gb|EGJ02620.1| tol-Pal system beta propeller repeat protein TolB [Shigella boydii
           3594-74]
          Length = 405

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 94/412 (22%), Positives = 184/412 (44%), Gaps = 11/412 (2%)

Query: 38  VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI 97
           + +   +  P+ +   ++         +  +V+ DL+ S  FN + +    Q+  +   +
Sbjct: 2   IDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEV 61

Query: 98  PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIA 155
            +   W++LG   +V G+V         V ++L D        +    +  +    R   
Sbjct: 62  -QPSAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAG 120

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++     Q L 
Sbjct: 121 HTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLM 178

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +SP+  K+AY T++        ++ T  + A +++ +F     AP FS +G +   +
Sbjct: 179 SPAWSPDGSKLAYVTFESGR--SALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFA 236

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y +  NG
Sbjct: 237 LSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 296

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              +RI+ +   +  D   S  G  +     +G +  I          ++L      + P
Sbjct: 297 GAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETP 355

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           + +P+G  +I+S  +    GS L  +  +GR +  L  T      P W  ++
Sbjct: 356 SLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 405


>gi|117923781|ref|YP_864398.1| TolB domain-containing protein [Magnetococcus sp. MC-1]
 gi|117607537|gb|ABK42992.1| TolB, N-terminal domain protein [Magnetococcus sp. MC-1]
          Length = 450

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 146/428 (34%), Positives = 234/428 (54%), Gaps = 23/428 (5%)

Query: 32  IHAF-VKVATNSANYSPVSIAFTKFVS---------IDELGGKVSEVVSKDLQRSDVFNL 81
           +HA  + +        P+ IA   F S          D    +++ +V  DL  S +F  
Sbjct: 28  VHAQGMMIEVQKQGLEPMPIAIPSFASVGLNGHVEVGDRFSHQLTGLVISDLSGSGLFRP 87

Query: 82  ISQDSFKQKITNP-DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
           + Q  F Q         P F+ W  +GA  +V G +   G  R++V+F L D+     I 
Sbjct: 88  LEQRGFLQPSDKLWQQGPDFRKWRLVGADAVVQGAITYRGS-RIQVDFFLHDISRGTLIG 146

Query: 141 -GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            G +F + P +WR +AH ++D+IY  +TGE+  F SRI FV++       ++ L +MD D
Sbjct: 147 KGWRFTTKPENWRHVAHRVADEIYTRLTGERAYFTSRIAFVAKR----DKQSFLSMMDAD 202

Query: 200 GANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           GAN   L    R+ ++  PRFSPN +++ Y +Y+  +  R+YL D    +  KR  N+  
Sbjct: 203 GANRMDLKVKGRNDLVLTPRFSPNGEQLLYISYESSEP-RIYLWDLYTGKRVKR-SNYPG 260

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +   P +S +G R  +++ KD   +IY +D+++ + +RLT    I+ S S+SPD  ++VF
Sbjct: 261 LNSTPAWSPDGNRMALTLSKDGNSEIYVIDMRNQSLQRLTYNAAIDTSPSWSPDGRRMVF 320

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SDR G  QLY+M ++GSD +R++Q  ++S   P WS +GD IAF +  G KF I V+  
Sbjct: 321 TSDRAGTPQLYIMDADGSDVRRLTQRGQSS-TAPSWSNRGDKIAFVRGGGGKFRIAVIDP 379

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-- 436
            G  E+LL +    ++PTWSP+GR ++FSR++ G + ++L++ID+ G NE  +       
Sbjct: 380 TGRDEQLLTDSWMDESPTWSPNGRVILFSRQQQGSSRTRLFTIDITGFNEQEVPLEQDIS 439

Query: 437 ASDPQWVG 444
           ASDP W  
Sbjct: 440 ASDPSWSP 447


>gi|167837694|ref|ZP_02464577.1| translocation protein TolB [Burkholderia thailandensis MSMB43]
          Length = 433

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 115/445 (25%), Positives = 193/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F+ +   S         +   F  W + GA   V G V +E   + +V
Sbjct: 59  SVVRADLARSGKFSNVDAGS---TPVPETASVDFGAWKAKGANAFVAGSVNREPNGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPAS--WRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S  +   RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 116 NFILYDTIKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRTG 175

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 176 N----VYKLLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 229

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV        RLT +  I+
Sbjct: 230 PTGRRY-VISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSID 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLI 361
               YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+
Sbjct: 289 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYN-TSPRISPDGKLL 347

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A+   +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       
Sbjct: 348 AYISRTGGGFKLYVQDLQTGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPS 407

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D +   + L        +P W  FM
Sbjct: 408 DGSAPPQILSVQGGAIREPSWGPFM 432


>gi|330975321|gb|EGH75387.1| translocation protein TolB [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 399

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 103/405 (25%), Positives = 199/405 (49%), Gaps = 12/405 (2%)

Query: 14  KINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            INL   L+++  F    + A    + V + S   +P+++    +   + L   ++E++S
Sbjct: 1   MINLFRGLLVVLCFASAMVSAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIIS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L
Sbjct: 61  NDLRNSGYYAPIPKQNMISLPTQASEVI-FRDWKALGAQYVMVGNITPAG-GRLQIQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFF 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D S + F SDR GK Q+Y    NG   +R++     +  +P  S     +        
Sbjct: 296 GKDGSTLYFTSDRGGKPQIYKTNINGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDG 354

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
              F + V        ++L + +  ++PT +P+G  +I++ ++ G
Sbjct: 355 FTNFKVAVQDLARGSVKILTDSNLDESPTVAPNGTMVIYATRQPG 399



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 5/123 (4%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S+   +  L     +G+    + Q +E     P ++P G  IA+  F  ++  I V   D
Sbjct: 174 SENNTRYTLQRSDYDGARAVTLLQSRE-PILSPRFAPDGKRIAYVSFEQKRPRIFVQHID 232

Query: 380 GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYA 437
             +   +   +    AP WSP G  L F   KDG    ++Y I+L  R    + N  +  
Sbjct: 233 TGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDG--NPEIYVINLASRQLSRVTNDSSID 290

Query: 438 SDP 440
           ++P
Sbjct: 291 TEP 293



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +  ++ +     DG++   L++    + +P ++P G+ + +   +       +  ID 
Sbjct: 174 SENNTRYTLQRSDYDGARAVTLLQSREPILSPRFAPDGKRIAYVSFEQKRPRIFVQHID- 232

Query: 424 NGRNETLINTPAYASDPQWVG 444
            GR E + N       P W  
Sbjct: 233 TGRREQITNFEGLNGAPAWSP 253


>gi|163854963|ref|YP_001629261.1| translocation protein TolB [Bordetella petrii DSM 12804]
 gi|163258691|emb|CAP40990.1| TolB protein precursor [Bordetella petrii]
          Length = 439

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 117/418 (27%), Positives = 196/418 (46%), Gaps = 15/418 (3%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
              HA ++V  +    +   +A   F   D  G  ++EV+  DL R+  F LIS      
Sbjct: 33  QPAHAQLRVDISGTGATQYPVAIADFAVDDVHGRAIAEVIRADLTRTGQFRLISAAG--- 89

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
              N DS   + DW + GA  L  G + +    R  V +RL D   + Q+ G  F  S  
Sbjct: 90  SGLNVDSPVAYDDWRTKGADFLAYGSITRGADGRYDVRYRLADTVKKGQLDGVAFSGSEQ 149

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
             R++AH I+D IY+ ITG +G F++RI +V +   +      L V D DG N +    S
Sbjct: 150 ELRRVAHQIADRIYEKITGVRGVFSTRIAYVLKRGNT----YELQVADADGQNPQVALRS 205

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R+ ++  P +SP+  K+AY +++      V  + T    A   + NF+    AP +S +G
Sbjct: 206 REPVI-SPAWSPDGSKLAYVSFESGKP--VVYVHTLATSARIPVANFKGNNSAPAWSPDG 262

Query: 270 KRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +  +++ +D    IY V     +   RLT +  I+    ++PD   I+F SDR G  Q+
Sbjct: 263 SKLAVALTRDGLSQIYIVGADGSSNMRRLTRSPGIDTEPIFTPDGRSIIFTSDRSGGPQI 322

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y    +G D +R++ +   +   P  SP G  + +       F I  ++     E LL +
Sbjct: 323 YQTSLDGGDARRLTFNGSYN-ISPRISPDGSTLLYVARRDGAFRIASLQLATGNETLLTD 381

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
             + QAP+++P+G  ++++  ++G   S L  +  +GR  +TL        +P W  F
Sbjct: 382 GRDDQAPSFAPNGMQILYAAVQNGR--SVLAGVSSDGRVRQTLSVLNGEIREPTWGPF 437


>gi|332096497|gb|EGJ01493.1| tol-Pal system beta propeller repeat protein TolB [Shigella
           dysenteriae 155-74]
          Length = 405

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 94/412 (22%), Positives = 184/412 (44%), Gaps = 11/412 (2%)

Query: 38  VATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI 97
           + +   +  P+ +   ++         +  +V+ DL+ S  FN + +    Q+  +   +
Sbjct: 2   IDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEV 61

Query: 98  PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIA 155
            +   W++LG   +V G+V         V ++L D        +    +  +    R   
Sbjct: 62  -QPGAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAG 120

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++     Q L 
Sbjct: 121 HTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLM 178

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +SP+  K+AY T++        ++ T  + A +++ +F     AP FS +G +   +
Sbjct: 179 SPAWSPDGSKLAYVTFESGR--SALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFA 236

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y +  NG
Sbjct: 237 LSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 296

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              +RI+ +   +  D   S  G  +     +G +  I          ++L      + P
Sbjct: 297 GAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETP 355

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           + +P+G  +I+S  +    GS L  +  +GR +  L  T      P W  ++
Sbjct: 356 SLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 405


>gi|116688823|ref|YP_834446.1| translocation protein TolB [Burkholderia cenocepacia HI2424]
 gi|254246220|ref|ZP_04939541.1| TolB [Burkholderia cenocepacia PC184]
 gi|166229976|sp|A0K4X6|TOLB_BURCH RecName: Full=Protein tolB; Flags: Precursor
 gi|116646912|gb|ABK07553.1| TolB, N-terminal domain protein [Burkholderia cenocepacia HI2424]
 gi|124870996|gb|EAY62712.1| TolB [Burkholderia cenocepacia PC184]
          Length = 431

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 188/443 (42%), Gaps = 18/443 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G     + +A V V       +   IA   F +   L  +V+
Sbjct: 3   LMTKLGFRALVASCLITAGS----AANAQVNVLITGVGSTQFPIATANFTNEANLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I   S         +      W + GA   V G V ++   + +V
Sbjct: 59  SIVRADLARSGKFTNIDAGS---TPVPETASVDLGAWKAKGANAFVAGSVNRDANGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++   
Sbjct: 116 NFILYDTVKQQSLGGLSLTATDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +     +++       IY+V+       RLT +  I+  
Sbjct: 230 GRRY-MVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNANGGGLRRLTQSSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+A+
Sbjct: 289 PFYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYN-TSPRVSPDGKLLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +G  F + V          +   +  ++P+++ +G+ ++++ +  G         D 
Sbjct: 348 ISRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYVLYATQSGGRNVLAAVPSDG 407

Query: 424 NGRNETLINTPAYASDPQWVGFM 446
           +   + L        +P W  FM
Sbjct: 408 SAPPQILSVQGGSVREPSWGPFM 430


>gi|166712983|ref|ZP_02244190.1| translocation protein TolB [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 439

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 111/414 (26%), Positives = 208/414 (50%), Gaps = 11/414 (2%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGG-KVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
           + +   SA+ +P+++    +          VS VV  DL RS  F  +      +K T  
Sbjct: 29  IDIVGGSASATPIAVIPMPYQGSGTAPQTDVSAVVGADLDRSGQFRTLPAAQIVEKPTRG 88

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
             + +FQ W +L    +V GRV+  G+   RVE+ L+DV   ++++G    +   + R +
Sbjct: 89  TEV-QFQTWRTLKQNYIVVGRVMDAGEGAYRVEYELFDVAKGERMLGLAMTARANAMRDV 147

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           +H ++D IY+ ITG +G F +RI +V+ S   G ++ +L V D DG N + +  S +  L
Sbjct: 148 SHQMADAIYEKITGVRGAFWTRIAYVTASGKGGAMRYALMVADSDGYNPQTIVRSAEP-L 206

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+ +K+AY +++  +   +YL D     A + + +FR +  AP FS +G+R  +
Sbjct: 207 LSPNWSPDGKKLAYVSFERGNS-SIYLQDIATG-ARELVSSFRGINGAPSFSPDGRRLAL 264

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ +    +IY +DL S    +LTN   I+   +++PD   I F SDR G+ Q+Y + ++
Sbjct: 265 ALSRSGNPEIYVMDLGSKQLTQLTNHFGIDTEPTWAPDGGSIYFTSDRGGRPQIYQVAAS 324

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNL 392
           G    R++     +    V S  G  IA  + SG  + I ++ +         L   S  
Sbjct: 325 GGSANRVTFQGNYNATASV-SFDGKKIAVAQGSGNTYRIAMVDRSLGSPSWSTLSPGSLD 383

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
           ++P+++P+   ++++ ++ G     LY++  + R  + L+       +P W  +
Sbjct: 384 ESPSFAPNASMVLYAAREGGRG--VLYAVSSDARVRQRLVLADGDVREPAWGPY 435


>gi|34495564|ref|NP_899779.1| translocation protein TolB [Chromobacterium violaceum ATCC 12472]
 gi|67461997|sp|Q7P1V3|TOLB_CHRVO RecName: Full=Protein tolB; Flags: Precursor
 gi|34101419|gb|AAQ57788.1| TolB protein precursor [Chromobacterium violaceum ATCC 12472]
          Length = 428

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 115/438 (26%), Positives = 205/438 (46%), Gaps = 12/438 (2%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +     L   +++       S  A + +       S  +I+   F       G ++ V+ 
Sbjct: 1   MPSLKTLLRGVLVAAMLVAGSARAELNIEIIGGGASRHAISVLPFKDEGPTQGNLTPVIR 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL  S  F LI   +       P  I R+  W + GAQ L  G+V   G  ++++ FRL
Sbjct: 61  NDLALSGAFRLIDPSAVANVPFEPADI-RYPLWQAAGAQSLAIGKVESAGGGQIKISFRL 119

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
            D   RKQ+ G +F  +P   R++AH I+D IY++ITG+KG FN+R+ +V +S  S    
Sbjct: 120 MDASQRKQLTGGEFTVTPDRSRQVAHAIADMIYEAITGQKGFFNTRLAYVLKSGRS---- 175

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L + D DG   + +  S + I+  P +SP+ + +AY ++  +  + V++ D    +  
Sbjct: 176 YALQISDVDGQRSQTILRSTEPII-SPSWSPDGRHIAYVSFASQKPV-VWVQDLATGQ-R 232

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + + NF+    AP +S +G +  + +       IY ++       RL     I+   ++S
Sbjct: 233 RAVANFKGSNSAPAWSPDGSKLAVVLTTSGNSQIYIINAAGGPARRLMYNGGIDTEPAFS 292

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD S + F SDR G  Q+Y +  NG + +R++ +   +   P  SP G  + + + S   
Sbjct: 293 PDGSMVYFVSDRSGNPQIYRVPVNGGNAQRVTWEGAYNV-SPKLSPDGKTLVYIRRSAGN 351

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-T 429
           F +       +  R L + S  + P+++P+GR +++S    G   S LY+   +G ++  
Sbjct: 352 FRVMSQDLATNDSRQLSDGSYSERPSFAPNGRMVLYSSDAGGQ--SVLYAATADGSSKVK 409

Query: 430 LINTPAYASDPQWVGFMD 447
           L        DP W  F +
Sbjct: 410 LAVLNGDVQDPAWGPFNN 427


>gi|167580763|ref|ZP_02373637.1| translocation protein TolB [Burkholderia thailandensis TXDOH]
          Length = 433

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 113/445 (25%), Positives = 192/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  +             +   F  W + GA   V G V +E   + +V
Sbjct: 59  SIVRADLARSGKFTNVDAGG---TPVPETASVDFGAWKAKGANAFVAGSVSREPNGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPAS--WRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S  +   RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 116 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRTG 175

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 176 N----VYKLLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 229

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV    +   RLT +  I+
Sbjct: 230 PTGRRY-VISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSSGSGLRRLTRSSSID 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLI 361
               YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+
Sbjct: 289 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAGGESAGAAQRVTFTGSYN-TSPRISPDGKLL 347

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A+   +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       
Sbjct: 348 AYISRTGGGFKLYVQDLQTGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPS 407

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D +   + L        +P W  FM
Sbjct: 408 DGSAPPQILSVQGGAIREPSWGPFM 432


>gi|311103961|ref|YP_003976814.1| Tol-Pal system beta propeller repeat protein TolB [Achromobacter
           xylosoxidans A8]
 gi|310758650|gb|ADP14099.1| Tol-Pal system beta propeller repeat protein TolB [Achromobacter
           xylosoxidans A8]
          Length = 417

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 117/428 (27%), Positives = 201/428 (46%), Gaps = 15/428 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF 79
           +L L         HA ++V  +    +   +A   F   D  G  ++EV+  DL R+  F
Sbjct: 1   MLTLACLMAIKPAHAQLRVDISGTGATQYPVAIADFAVDDTHGRALAEVIRADLTRTGQF 60

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
            LI+         N DS     DW   GA  +  G + + G  R  V +RL D   + Q+
Sbjct: 61  RLINAAG---SGLNVDSPIAHDDWRGKGADFIAYGSITRGGDGRYDVRYRLADTVKKSQL 117

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            G  F  +    R++AH I+D IY+ ITG KG F++RI +V +   +      L V D D
Sbjct: 118 DGVAFSGTEQELRRVAHQIADRIYEKITGVKGVFSTRIAYVLKKGAT----YELQVADAD 173

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N +    SR+ I+  P +SP+  K+AY +++    + VY+ +         + NF+  
Sbjct: 174 GQNPQVALRSREPII-SPSWSPDGSKLAYVSFESGKPV-VYVHNLATSARS-PVANFKGN 230

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTLFINISASYSPDSSQIVF 318
             AP +S +G +  +++ +D    IY V     +   R+T +  I+   S++PD + I+F
Sbjct: 231 NSAPGWSPDGSKLAVALTRDGLSQIYIVGATDGSNPTRVTRSPGIDTEPSFTPDGASIIF 290

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SDR G  Q+Y   S+G + +R++ +   +   P  SP G  + +       F I  +  
Sbjct: 291 TSDRSGGPQIYQTGSSGGEARRLTFNGGYN-ISPRISPDGSTLLYVARRDGAFRIASLNL 349

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYA 437
               E LL +  + Q+P+++P+G  ++++  ++G   S L  +  +GR  +TL       
Sbjct: 350 SSGSETLLTDGRDDQSPSFAPNGMQVLYAAIQNGR--SVLAGVSSDGRVRQTLSVLNGEI 407

Query: 438 SDPQWVGF 445
            +P W  F
Sbjct: 408 REPTWGPF 415


>gi|149185617|ref|ZP_01863933.1| translocation protein TolB precursor [Erythrobacter sp. SD-21]
 gi|148830837|gb|EDL49272.1| translocation protein TolB precursor [Erythrobacter sp. SD-21]
          Length = 460

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 146/417 (35%), Positives = 217/417 (52%), Gaps = 18/417 (4%)

Query: 42  SANYSPVSIAFTKFV------------SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
             N   + IA   F               + LG +++ V++ +L+ + +F     DS  +
Sbjct: 49  EGNLDDLGIAIPAFATDRNVATPANASGTEALGLEMARVITANLRNNGLFKPAGPDSLPR 108

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
                 + P +  W+  GA++LV G V     DRL V   L+D+  +++++ + +  SPA
Sbjct: 109 PEFANITSPVWGTWSVRGAEMLVHGYVRARSDDRLTVGCYLYDMALQQRLVAEGWVVSPA 168

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            WR+ AH  SD IY  +TGE   F+SRI +++E+         L +MD DGAN R++T  
Sbjct: 169 DWRRAAHKCSDLIYSRLTGESPFFDSRIAYIAETGPKDNRVKRLAIMDSDGANHRFITTG 228

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R      PR+SP+ +++ Y +Y D +  R+Y+ D         +    +   APR+S +G
Sbjct: 229 RS-TALTPRYSPDYKRLVYLSYVDGNP-RIYVYDIGTGSQT-LVTQSDNPTFAPRWSPDG 285

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +  L S+      DIY V  Q   +ERLT+T  I+I  SYSPD  +IVFESDR G +Q Y
Sbjct: 286 RWILYSMAVGGNTDIYRVSAQGGRSERLTDTPGIDIGGSYSPDGRRIVFESDRSGAQQCY 345

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           VM ++GS+Q+RIS         P WSP+GD IAFT  S   F I VM   G   R L   
Sbjct: 346 VMDADGSNQRRISFGGSR-CATPEWSPRGDQIAFTNAS--SFNISVMSPSGGNVRTLTRG 402

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
              +APTW+P+GR + F R +     + L+ +DL G NE  + TP  ASDP W   +
Sbjct: 403 WQDEAPTWAPNGRIIQFFRTERNSGKTSLWQVDLTGENERSLPTPVDASDPAWGPIL 459


>gi|171058627|ref|YP_001790976.1| translocation protein TolB [Leptothrix cholodnii SP-6]
 gi|170776072|gb|ACB34211.1| Tol-Pal system beta propeller repeat protein TolB [Leptothrix
           cholodnii SP-6]
          Length = 427

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 114/419 (27%), Positives = 205/419 (48%), Gaps = 15/419 (3%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
            T+  A  +V  +    + V IA  +    D+    VS +V  DL+RS +F  +   +  
Sbjct: 20  ATASRAQFRVEISGVGATQVPIAVLRLRDEDKAPQPVSAIVRADLERSGLFRSVEPGNV- 78

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
               +  S P F DW SLG+  LV G V +    R  V +RLWDV    ++  +    + 
Sbjct: 79  --AHDETSRPVFSDWRSLGSDALVAGSVTRLADARFDVRYRLWDVVKGSELAAQALSVAK 136

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R  AH I+DD+YQ +TGE+G F++RI +VS        + +L V D DG N +    
Sbjct: 137 DDLRLAAHRIADDVYQKLTGERGVFSTRIAYVS----KAANRYTLWVADADGENAQAAVG 192

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             + I+  P +SPN +++AY +++    + VY+ D    +  + I N++    AP +S +
Sbjct: 193 GPEPII-SPAWSPNGRELAYVSFEARKAV-VYVQDVLTSK-RRVIANYKGSNSAPAWSPD 249

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G + ++++ +D    +Y++        RLT +  I+  A++SPD   + F SDR G  Q+
Sbjct: 250 GNQLVVTLTRDGLSQLYTMSRTGGDLRRLTTSSGIDTEAAWSPDGKSVYFVSDRGGGPQI 309

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLV 387
           Y + + G + +R++     +   P  SP G  +A+    +G  F + +M+        L 
Sbjct: 310 YRVAAGGGNAERVTFAGNYN-ISPALSPDGRYMAYVSRLNGSAFRLTLMELATGTITTLT 368

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGF 445
           + ++ ++P ++P+ R +I++ +  G     L +  L+G  +  +  P A   +P W  F
Sbjct: 369 DTNDDESPGFAPNSRLIIYATRAGGR--DVLMTTTLDGSIKARLGAPQADVREPTWGPF 425



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 47/139 (33%), Gaps = 7/139 (5%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            + FVS+          +  +   G N   +T + +     P  SP+ + +AY +  +  
Sbjct: 296 SVYFVSDRGGGP----QIYRVAAGGGNAERVTFAGN-YNISPALSPDGRYMAYVSRLNGS 350

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             R+ LM+              +   +P F+ N +  + + +      + +  L  +   
Sbjct: 351 AFRLTLMELATGTITT--LTDTNDDESPGFAPNSRLIIYATRAGGRDVLMTTTLDGSIKA 408

Query: 296 RLTNTLFINISASYSPDSS 314
           RL          ++ P   
Sbjct: 409 RLGAPQADVREPTWGPFGR 427


>gi|291612990|ref|YP_003523147.1| Tol-Pal system beta propeller repeat protein TolB [Sideroxydans
           lithotrophicus ES-1]
 gi|291583102|gb|ADE10760.1| Tol-Pal system beta propeller repeat protein TolB [Sideroxydans
           lithotrophicus ES-1]
          Length = 419

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 111/430 (25%), Positives = 194/430 (45%), Gaps = 17/430 (3%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS-IDELGGKVSEVVSKDLQRSD 77
            L V++      S  A + +    A    V I+   F    ++ G  +S VVS DL R+ 
Sbjct: 3   FLGVIVLLCVACSARAELSIEITGAGEHQVPISLVPFAGDENQGGQSISTVVSNDLLRTG 62

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F L+       K  +      + +W   G   L+ G+V      RL V FRL D+  R 
Sbjct: 63  LFKLVDPAG---KAPHEPGEVNYVEW--PGVDALLIGKVRNLDGGRLEVRFRLLDMVRRT 117

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           ++IG    +     R IAH +SD IY+ +TG+ G F++RI +V+        K  L V D
Sbjct: 118 ELIGLAVTAKSEQLRAIAHRVSDLIYEKLTGDPGVFSTRIAYVNRDG----KKYRLVVAD 173

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG   + L    + I   P +SP+  ++AY +++         + +   R    + +F 
Sbjct: 174 SDGYGEQTLLALNEPI-MSPAWSPDGSQLAYVSFERGHAS--VFVQSLATRKRTVLADFP 230

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               AP +S +GK+  + + +D    +Y V        R+T +  I+    ++PD   ++
Sbjct: 231 GSNSAPAWSPDGKQLALVLSRDGYSQLYLVRNDGKDLHRITFSETIDTEPVFTPDGKSLL 290

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SDR G  Q+Y +   G   +R++ D   + F P  SP G    F+ F    F I V  
Sbjct: 291 FTSDRGGSAQIYRVPVEGGSAERLTFDG-TNNFSPRPSPDGKSFVFSHFVDGVFYIAVQD 349

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAY 436
            + +Q ++L      + P+++P+G+ ++F+ +  G     L ++  +GR  + +I     
Sbjct: 350 FETNQMQVLTGGGWEKKPSFAPNGKLILFATESQGRGI--LATVSSDGRVKQKMIAQRGD 407

Query: 437 ASDPQWVGFM 446
             +P W  F+
Sbjct: 408 IREPIWGPFL 417


>gi|124385902|ref|YP_001028613.1| translocation protein TolB [Burkholderia mallei NCTC 10229]
 gi|254207691|ref|ZP_04914041.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei JHU]
 gi|147751585|gb|EDK58652.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei JHU]
          Length = 431

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 116/445 (26%), Positives = 194/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 1   MMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 56

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F+ +   S         +   F  W + GA   V G V +E   + +V
Sbjct: 57  SVVRGDLARSGKFSNVDAGS---TPVPETASVDFGAWKAKGANAFVAGSVNREPNGQYKV 113

Query: 127 EFRLWDVKDRKQIIGKKFFSSPAS--WRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S  +   RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 114 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRTG 173

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 174 N----VYKLLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 227

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV        RLT +  I+
Sbjct: 228 PTGRRY-VISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSID 286

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLI 361
               YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+
Sbjct: 287 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYN-TSPRVSPDGKLL 345

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A+   +G  F + V          +   +  ++P+++ +G+ ++++R+  G +       
Sbjct: 346 AYISRTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYARQSGGRSVLAAVPS 405

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D +   + L        +P W  FM
Sbjct: 406 DGSAPPQILSVQGGAIREPSWGPFM 430


>gi|119504264|ref|ZP_01626344.1| translocation protein TolB precursor [marine gamma proteobacterium
           HTCC2080]
 gi|119459772|gb|EAW40867.1| translocation protein TolB precursor [marine gamma proteobacterium
           HTCC2080]
          Length = 431

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 196/434 (45%), Gaps = 9/434 (2%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVSKDL 73
           NL  +L+L          A +++       +P  IA   F           V+ ++  DL
Sbjct: 3   NLLRVLILSLCVATFPALAQLQIEITRGVDNPTPIAVVPFGWSGSGASPEDVARIIDSDL 62

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  F+ +S+       +    +  F+DW ++ +  ++ GR        L++ ++L+D 
Sbjct: 63  ARSGQFSPVSRRDMLSYPSRGSEL-YFRDWRAINSDYVLIGRYELAAAGNLKLSWQLFDS 121

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNS 192
                +       + +  R +AH I+D++Y+ +TG  G F +R+L+VS     +G     
Sbjct: 122 TRELSVEEGVVMGAASEVRMLAHKIADEVYEKLTGIPGAFATRLLYVSVTRNPAGKDFYR 181

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L + D DGA    L  SR+ I   P +SPN  +VAY +++      +Y  + R   A ++
Sbjct: 182 LTLADSDGARPIVLLESREPI-LGPSWSPNGDEVAYVSFETSRPA-IYRQNLRTG-AREQ 238

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + NF+ +  +P FS +G    + + KD + DIY ++L S    RLT    I+   ++ PD
Sbjct: 239 LTNFKGLNNSPVFSPDGNSMAMVLSKDGSPDIYLMNLASKRLTRLTKHYAIDTEPTWMPD 298

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              ++F SDR G+ Q+Y       +  R++ D   +    V +  G  +A        + 
Sbjct: 299 GQSLLFTSDRGGRPQIYRYDLKSGNTTRVTFDGRYNARARV-AQDGRNVALVHQQNGAYH 357

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           I V      +  +L   S  ++PT +P+G  ++++ K++G +     ++D  G +  L  
Sbjct: 358 IAVFDLVTERLTVLTTTSLDESPTIAPNGSIVLYATKRNGQSILGAVAVDG-GVSFNLPA 416

Query: 433 TPAYASDPQWVGFM 446
                 +P W  ++
Sbjct: 417 RDGEVQEPSWSPYL 430


>gi|182681495|ref|YP_001829655.1| translocation protein TolB [Xylella fastidiosa M23]
 gi|182631605|gb|ACB92381.1| Tol-Pal system beta propeller repeat protein TolB [Xylella
           fastidiosa M23]
          Length = 474

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 120/453 (26%), Positives = 217/453 (47%), Gaps = 16/453 (3%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKF--- 55
           S+ F    +L+M      L +L+G  FP S       + +     N +   IA       
Sbjct: 25  SIIFLKVIDLHMTKFPRWLAMLVGLLFPLSALTQQQGLTIDIVGGNTAATPIAVLPMPYH 84

Query: 56  VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR 115
            S       VS VV+ DL RS  F  +      ++ T+   I RF  W +L    +V GR
Sbjct: 85  DSAGAPATDVSGVVAADLNRSGQFRTLPLGQITERPTHGSEI-RFPTWQALKQDYIVVGR 143

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V+   +   RVE+ L+DV++ K+++G    +  ++ R +AH ++D IY+ ITG +G F +
Sbjct: 144 VLDARQGTYRVEYELFDVRNGKRMLGLAMTARASAMRDVAHQMADAIYEKITGLRGAFFT 203

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI +V+ S   G ++ +L V D DG N + +  S +  L  P +S + +K+AY +++ + 
Sbjct: 204 RIAYVTASGSHGAMRYALMVADSDGYNPQTIVRSAEP-LLSPDWSSDGKKLAYVSFE-KG 261

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +Y+ D       + + +FR +  AP F+ +G R  +S+ +    +IY +DL S    
Sbjct: 262 GSSIYIQDIATGS-RELVSSFRGINAAPSFAPDGHRIALSLSRSGNPEIYVMDLVSKQLI 320

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +LTN+  I+    +S D   I F SDR G+ Q+Y + S G    R++     +    V S
Sbjct: 321 QLTNSFGIDTEPVWSSDGKFIYFTSDRGGRPQIYKVASVGGAATRVTFQGNYNASASV-S 379

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                I   + SG  + I +M +         L   S  ++P+++P+   ++++ ++ G 
Sbjct: 380 YDDKKIVVAQGSGNVYRIAMMDQSSGSTVWNTLSTGSLDESPSFAPNASMVLYAAREGGR 439

Query: 414 TGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
               LY++  + R  + L++  +   +P W  +
Sbjct: 440 G--VLYAVSADARVRQRLVSVDSDVREPAWGPY 470


>gi|83720845|ref|YP_441919.1| translocation protein TolB [Burkholderia thailandensis E264]
 gi|83654670|gb|ABC38733.1| tolB protein [Burkholderia thailandensis E264]
          Length = 463

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 113/445 (25%), Positives = 192/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 33  LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 88

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  +             +   F  W + GA   V G V +E   + +V
Sbjct: 89  SIVRADLARSGKFTNVDAGG---TPVPETASVDFGAWKAKGANAFVAGSVSREPNGQYKV 145

Query: 127 EFRLWDVKDRKQIIGKKFFSSPAS--WRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S  +   RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 146 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRTG 205

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 206 N----VYKLLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 259

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV    +   RLT +  I+
Sbjct: 260 PTGRRY-VISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGSGLHRLTRSSSID 318

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLI 361
               YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+
Sbjct: 319 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAGGESAGAAQRVTFTGSYN-TSPRISPDGKLL 377

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A+   +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       
Sbjct: 378 AYISRTGGGFKLYVQDLQTGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPS 437

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D +   + L        +P W  FM
Sbjct: 438 DGSAPPQILSVQGGAIREPSWGPFM 462


>gi|121600577|ref|YP_992167.1| translocation protein TolB [Burkholderia mallei SAVP1]
 gi|121229387|gb|ABM51905.1| tolB protein [Burkholderia mallei SAVP1]
          Length = 463

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 116/445 (26%), Positives = 194/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 33  LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 88

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F+ +   S         +   F  W + GA   V G V +E   + +V
Sbjct: 89  SVVRGDLARSGKFSNVDAGS---TPVPETASVDFGAWKAKGANAFVAGSVNREPNGQYKV 145

Query: 127 EFRLWDVKDRKQIIGKKFFSSPAS--WRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S  +   RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 146 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRTG 205

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 206 N----VYKLLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 259

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV        RLT +  I+
Sbjct: 260 PTGRRY-VISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSID 318

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLI 361
               YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+
Sbjct: 319 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYN-TSPRVSPDGKLL 377

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A+   +G  F + V          +   +  ++P+++ +G+ ++++R+  G +       
Sbjct: 378 AYISRTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYARQSGGRSVLAAVPS 437

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D +   + L        +P W  FM
Sbjct: 438 DGSAPPQILSVQGGAIREPSWGPFM 462


>gi|78065363|ref|YP_368132.1| translocation protein TolB [Burkholderia sp. 383]
 gi|119371038|sp|Q39J78|TOLB_BURS3 RecName: Full=Protein tolB; Flags: Precursor
 gi|77966108|gb|ABB07488.1| Periplasmic component of the Tol biopolymer transport system
           [Burkholderia sp. 383]
          Length = 431

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 106/443 (23%), Positives = 188/443 (42%), Gaps = 18/443 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G     + +A V V       +   IA   F +   L  +V+
Sbjct: 3   LMTKLGFRALVASCLITAGS----AANAQVNVLITGVGSTQFPIATANFANEANLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I   S         +      W + GA   V G V +E   + +V
Sbjct: 59  SIVRADLARSGKFTNIDAGS---TPVPESASVDLGAWKAKGANAFVAGSVNREANGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++   
Sbjct: 116 NFILYDTVKQQSLGGLSLTATDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNARIALSSTEPII-SPSWSPSGTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +     +++       IY+V+       RLT +  I+  
Sbjct: 230 GRRY-IVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNSTGGGLRRLTQSSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+A+
Sbjct: 289 PFYSPDGHWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYN-TSPRISPDGKLLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +G  F + V          +   +  ++P+++ +G+ L+++ +  G         D 
Sbjct: 348 ISRTGGGFKLYVQDLQSGAANAITNTNRDESPSFAANGQYLLYATQSGGRNVLAAVPSDG 407

Query: 424 NGRNETLINTPAYASDPQWVGFM 446
           +   + L        +P W  FM
Sbjct: 408 SAPPQILSVQGGSVREPSWGPFM 430


>gi|293603404|ref|ZP_06685831.1| TolB protein [Achromobacter piechaudii ATCC 43553]
 gi|292818177|gb|EFF77231.1| TolB protein [Achromobacter piechaudii ATCC 43553]
          Length = 416

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 114/427 (26%), Positives = 198/427 (46%), Gaps = 15/427 (3%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFN 80
           ++ +        HA ++V  +    +   +A   F   D  G  ++EV+  DL R+  F 
Sbjct: 1   MLALCLMAAKPAHAQLRVDISGTGATQYPVAIADFAVDDTHGRALAEVIRADLTRTGQFR 60

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
           LI+         N DS     DW   GA  L  G + +    R  V +RL D   + Q+ 
Sbjct: 61  LINAAG---SGLNVDSPIAHDDWRGKGADFLAYGSITRGADGRYDVRYRLADTVKKGQLD 117

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G  F  +    R++AH I+D IY+ ITG +G F++RI +V +   +      L V D DG
Sbjct: 118 GVAFSGTEQELRRVAHQIADRIYEKITGVRGVFSTRIAYVLKKGAT----YELQVADADG 173

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N +    SR+ I+  P +SP+  K+AY +++      V  + T    A   + NF+   
Sbjct: 174 QNPQVALRSREPII-SPSWSPDGAKLAYVSFESGKP--VVYVHTLATSARVPVANFKGNN 230

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTLFINISASYSPDSSQIVFE 319
            AP +S +G +  +++ +D    IY V     +   R+T +  I+   +++PD + I+F 
Sbjct: 231 SAPAWSPDGSKLAVALTRDGLSQIYIVGASDGSNPTRVTRSPGIDTEPTFTPDGASIIFT 290

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SDR G  Q+Y   S G + +R++ +   +   P  SP G  + +       F I  +   
Sbjct: 291 SDRSGGPQIYQTGSTGGEARRLTFNGGYN-ISPRISPDGSTLLYVARRDGAFRIASLNLS 349

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYAS 438
              E LL +  + Q+P+++P+G  ++++  ++G   S L  +  +GR  +TL        
Sbjct: 350 SGSESLLTDGRDDQSPSFAPNGMQVLYAAIQNGR--SVLAGVSSDGRVRQTLSVLNGEIR 407

Query: 439 DPQWVGF 445
           +P W  F
Sbjct: 408 EPTWGPF 414


>gi|167618866|ref|ZP_02387497.1| translocation protein TolB [Burkholderia thailandensis Bt4]
 gi|257138090|ref|ZP_05586352.1| translocation protein TolB [Burkholderia thailandensis E264]
 gi|118574574|sp|Q2SYT0|TOLB_BURTA RecName: Full=Protein tolB; Flags: Precursor
          Length = 433

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 113/445 (25%), Positives = 192/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  +             +   F  W + GA   V G V +E   + +V
Sbjct: 59  SIVRADLARSGKFTNVDAGG---TPVPETASVDFGAWKAKGANAFVAGSVSREPNGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPAS--WRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S  +   RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 116 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRTG 175

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 176 N----VYKLLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 229

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV    +   RLT +  I+
Sbjct: 230 PTGRRY-VISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGSGLHRLTRSSSID 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLI 361
               YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+
Sbjct: 289 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAGGESAGAAQRVTFTGSYN-TSPRISPDGKLL 347

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A+   +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       
Sbjct: 348 AYISRTGGGFKLYVQDLQTGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPS 407

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D +   + L        +P W  FM
Sbjct: 408 DGSAPPQILSVQGGAIREPSWGPFM 432


>gi|187927780|ref|YP_001898267.1| translocation protein TolB [Ralstonia pickettii 12J]
 gi|187724670|gb|ACD25835.1| Tol-Pal system beta propeller repeat protein TolB [Ralstonia
           pickettii 12J]
          Length = 434

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 114/419 (27%), Positives = 191/419 (45%), Gaps = 18/419 (4%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
            HA + V  +    S   IA   F    +    +S +V  DL RS  F+ +        +
Sbjct: 29  AHAQLNVEISGVGASQYPIAIANFQGEAQAPQNLSAIVRADLVRSGRFSNVDVAGA---V 85

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
                 P    W + GA   V G V + G DR  + FRL+D    + + G      P   
Sbjct: 86  VPESPAPDLGAWKAKGAAAFVGGTVTRNG-DRYEIRFRLYDTAKGESLGGLSLTRGPGQL 144

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R  AH I+D IYQ + GE+G F +R+ +VS+       +  L + D DGAN +    S +
Sbjct: 145 RLAAHEIADYIYQKLIGERGVFATRLSYVSKVG----RRFQLQISDSDGANPQIALTSNE 200

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I+  P +SP+  KVAY +++ +  + VY+ D    R    I N +    AP +S +G+ 
Sbjct: 201 PII-SPAWSPDGTKVAYVSFESKKPV-VYVHDLVAGR-RTVISNQKGNNSAPAWSPDGRH 257

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +S+ +D    +Y V+   +   RL+ +  I+   S+SPD   I F SDR G  Q+Y M
Sbjct: 258 VAVSLSRDGNTQVYLVNADGSGLRRLSRSSAIDTEPSFSPDGRSIYFTSDRGGAPQIYRM 317

Query: 332 QSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             +G      +R++     +   P  SP G L+A+    G  F +            L +
Sbjct: 318 SVDGEEAGGAQRVTFKGNYN-TSPRVSPDGKLLAYISRVGGAFRLYTQDLSNGDVNALTD 376

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVGFM 446
            SN ++P+++ +G+ ++++ +  G   S L ++  +GR   +++       +P W  FM
Sbjct: 377 TSNDESPSFAANGKFILYATRVGGK--SVLAAVSTDGRTRQVLSLQAGEVREPAWGPFM 433


>gi|53725631|ref|YP_103660.1| translocation protein TolB [Burkholderia mallei ATCC 23344]
 gi|166998276|ref|ZP_02264136.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei PRL-20]
 gi|262193278|ref|YP_001081486.2| translocation protein TolB [Burkholderia mallei NCTC 10247]
 gi|67461934|sp|Q62I10|TOLB_BURMA RecName: Full=Protein tolB; Flags: Precursor
 gi|52429054|gb|AAU49647.1| tolB protein [Burkholderia mallei ATCC 23344]
 gi|243065356|gb|EES47542.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei PRL-20]
 gi|261826004|gb|ABN03191.2| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei NCTC 10229]
 gi|261835072|gb|ABO06119.2| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei NCTC 10247]
          Length = 433

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 116/445 (26%), Positives = 194/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F+ +   S         +   F  W + GA   V G V +E   + +V
Sbjct: 59  SVVRGDLARSGKFSNVDAGS---TPVPETASVDFGAWKAKGANAFVAGSVNREPNGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPAS--WRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S  +   RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 116 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRTG 175

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 176 N----VYKLLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 229

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV        RLT +  I+
Sbjct: 230 PTGRRY-VISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSID 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLI 361
               YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+
Sbjct: 289 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYN-TSPRVSPDGKLL 347

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A+   +G  F + V          +   +  ++P+++ +G+ ++++R+  G +       
Sbjct: 348 AYISRTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYARQSGGRSVLAAVPS 407

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D +   + L        +P W  FM
Sbjct: 408 DGSAPPQILSVQGGAIREPSWGPFM 432


>gi|71901735|ref|ZP_00683807.1| TolB, N-terminal [Xylella fastidiosa Ann-1]
 gi|71728507|gb|EAO30666.1| TolB, N-terminal [Xylella fastidiosa Ann-1]
          Length = 474

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 120/453 (26%), Positives = 217/453 (47%), Gaps = 16/453 (3%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKF--- 55
           S+ F    +L+M      L +L+G  FP S       + +     N +   IA       
Sbjct: 25  SIIFLKVIDLHMTKFPRWLAMLVGLLFPLSALTQQQGLTIDIVGGNTAATPIAVLPMPYH 84

Query: 56  VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR 115
            S       VS VV+ DL RS  F  +      ++ T+   I RF  W +L    +V GR
Sbjct: 85  DSAGAPATDVSGVVAADLNRSGQFRTLPLGQITERPTHGSEI-RFPIWQALKQDYIVVGR 143

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V+   +   RVE+ L+DV++ K+++G    +  ++ R +AH ++D IY+ ITG +G F +
Sbjct: 144 VLDARQGTYRVEYELFDVRNGKRMLGLAMTARASAMRDVAHQMADAIYEKITGLRGAFFT 203

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI +V+ S     ++ +L V D DG N + +  S +  L  P +SP+ +K+AY +++ + 
Sbjct: 204 RIAYVTASGSHRAMRYALMVADSDGYNPQTIVRSAEP-LLSPDWSPDGKKLAYVSFE-KG 261

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +Y+ D       + + +FR +  AP F+ +G R  +S+ +    +IY +DL S    
Sbjct: 262 GSSIYIQDIATGS-RELVSSFRGINAAPSFAPDGHRIALSLSRSGNPEIYVMDLVSKQLI 320

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +LTN+  I+    +S D   I F SDR G+ Q+Y + S G    R++     +    V S
Sbjct: 321 QLTNSFGIDTEPVWSSDGKFIYFTSDRGGRPQIYKVASVGGAATRVTFQGNYNASASV-S 379

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                I   + SG  + I +M +         L   S  ++P+++P+   ++++ ++ G 
Sbjct: 380 YDDKKIVVAQGSGNVYRIAMMDQSSGSTVWNTLSTGSLDESPSFAPNASMVLYAAREGGR 439

Query: 414 TGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
               LY++  + R  + L++  +   +P W  +
Sbjct: 440 G--VLYAVSADARVRQRLVSVDSDVREPAWGPY 470


>gi|76811659|ref|YP_334628.1| translocation protein TolB [Burkholderia pseudomallei 1710b]
 gi|242315897|ref|ZP_04814913.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei 1106b]
 gi|76581112|gb|ABA50587.1| tolB protein [Burkholderia pseudomallei 1710b]
 gi|242139136|gb|EES25538.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei 1106b]
          Length = 463

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 115/445 (25%), Positives = 193/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 33  LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 88

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F+ +   S         +   F  W + GA   V G V +E   + +V
Sbjct: 89  SVVRGDLARSGKFSNVDAGS---TPVPETASVDFGAWKAKGANAFVAGSVNREPNGQYKV 145

Query: 127 EFRLWDVKDRKQIIGKKFFSSPAS--WRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S  +   RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 146 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRTG 205

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 206 N----VYKLLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 259

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV        RLT +  I+
Sbjct: 260 PTGRRY-VISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSID 318

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLI 361
               YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+
Sbjct: 319 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYN-TSPRVSPDGKLL 377

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A+   +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       
Sbjct: 378 AYISRTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPS 437

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D +   + L        +P W  FM
Sbjct: 438 DGSAPPQILSVQGGAIREPSWGPFM 462


>gi|107021875|ref|YP_620202.1| translocation protein TolB [Burkholderia cenocepacia AU 1054]
 gi|118574572|sp|Q1BYS6|TOLB_BURCA RecName: Full=Protein tolB; Flags: Precursor
 gi|105892064|gb|ABF75229.1| TolB-like protein [Burkholderia cenocepacia AU 1054]
          Length = 431

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 104/443 (23%), Positives = 188/443 (42%), Gaps = 18/443 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G     + +A V V       +   IA   F +   L  +V+
Sbjct: 3   LMTKLGFRALVASCLITAGS----AANAQVNVLITGVGSTQFPIATANFTNEANLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I   S         +      W + GA   V G V ++   + +V
Sbjct: 59  SIVRADLARSGKFTNIDAGS---TPVPETASVDLGAWKAKGANAFVAGSVNRDANGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++   
Sbjct: 116 NFILYDTVKQQSLGGLSLTATDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNARIALSSTEPII-SPAWSPSSTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S +     +++       IY+V+       RLT +  I+  
Sbjct: 230 GRRY-MVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNANGGGLRRLTQSSSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+A+
Sbjct: 289 PFYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYN-TSPRVSPDGKLLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +G  F + V          +   +  ++P+++ +G+ ++++ +  G         D 
Sbjct: 348 ISRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYVLYATQSGGRNVLAAVPSDG 407

Query: 424 NGRNETLINTPAYASDPQWVGFM 446
           +   + L        +P W  FM
Sbjct: 408 SAPPQILSVQGGSVREPSWGPFM 430


>gi|53720374|ref|YP_109360.1| translocation protein TolB [Burkholderia pseudomallei K96243]
 gi|167720990|ref|ZP_02404226.1| translocation protein TolB [Burkholderia pseudomallei DM98]
 gi|167739947|ref|ZP_02412721.1| translocation protein TolB [Burkholderia pseudomallei 14]
 gi|167817184|ref|ZP_02448864.1| translocation protein TolB [Burkholderia pseudomallei 91]
 gi|167825597|ref|ZP_02457068.1| translocation protein TolB [Burkholderia pseudomallei 9]
 gi|167847081|ref|ZP_02472589.1| translocation protein TolB [Burkholderia pseudomallei B7210]
 gi|167895665|ref|ZP_02483067.1| translocation protein TolB [Burkholderia pseudomallei 7894]
 gi|167904058|ref|ZP_02491263.1| translocation protein TolB [Burkholderia pseudomallei NCTC 13177]
 gi|167912315|ref|ZP_02499406.1| translocation protein TolB [Burkholderia pseudomallei 112]
 gi|167920272|ref|ZP_02507363.1| translocation protein TolB [Burkholderia pseudomallei BCC215]
 gi|254194869|ref|ZP_04901299.1| putative TolB protein [Burkholderia pseudomallei S13]
 gi|67461935|sp|Q63RA8|TOLB_BURPS RecName: Full=Protein tolB; Flags: Precursor
 gi|118574573|sp|Q3JP75|TOLB_BURP1 RecName: Full=Protein tolB; Flags: Precursor
 gi|52210788|emb|CAH36772.1| putative periplasmic TolB protein [Burkholderia pseudomallei
           K96243]
 gi|169651618|gb|EDS84311.1| putative TolB protein [Burkholderia pseudomallei S13]
          Length = 433

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 115/445 (25%), Positives = 193/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F+ +   S         +   F  W + GA   V G V +E   + +V
Sbjct: 59  SVVRGDLARSGKFSNVDAGS---TPVPETASVDFGAWKAKGANAFVAGSVNREPNGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPAS--WRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S  +   RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 116 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRTG 175

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 176 N----VYKLLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 229

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV        RLT +  I+
Sbjct: 230 PTGRRY-VISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSID 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLI 361
               YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+
Sbjct: 289 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYN-TSPRVSPDGKLL 347

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A+   +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       
Sbjct: 348 AYISRTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPS 407

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D +   + L        +P W  FM
Sbjct: 408 DGSAPPQILSVQGGAIREPSWGPFM 432


>gi|167563919|ref|ZP_02356835.1| translocation protein TolB [Burkholderia oklahomensis EO147]
 gi|167571054|ref|ZP_02363928.1| translocation protein TolB [Burkholderia oklahomensis C6786]
          Length = 433

 Score =  367 bits (941), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 115/445 (25%), Positives = 193/445 (43%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL RS  F+ +   S         +   F  W + GA   V G V +E   + +V
Sbjct: 59  SVVRGDLARSGKFSNVDAGS---TPVPETASVDFGAWKAKGANAFVAGSVSREPNGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPAS--WRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            F L+D   ++ + G    +S  +   RK  H I+D IYQ + G +G FN+R+ +V  + 
Sbjct: 116 NFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRTG 175

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L + D DG N      S++ I+  P +SP+  KVAY +++ +  + VY+ D 
Sbjct: 176 N----VYKLLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELKKPV-VYIHDL 229

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV        RLT +  I+
Sbjct: 230 PTGRRY-VISNQKGNNSAPAWSPDGQTLSVALSLTGNTQIYSVSSTGTGLRRLTRSSSID 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLI 361
               YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+
Sbjct: 289 TEPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYN-TSPRISPDGKLL 347

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A+   +G  F + V          +   +  ++P+++ +G+ ++++ +  G         
Sbjct: 348 AYISRTGGGFKLYVQDLQTGAANAVTNTTRDESPSFAANGQYILYATQSGGRGVLAAVPS 407

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D +   + L        +P W  FM
Sbjct: 408 DGSAPPQILSVQGGAIREPSWGPFM 432


>gi|294013406|ref|YP_003546866.1| TolB protein [Sphingobium japonicum UT26S]
 gi|292676736|dbj|BAI98254.1| TolB protein [Sphingobium japonicum UT26S]
          Length = 417

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 151/421 (35%), Positives = 219/421 (52%), Gaps = 19/421 (4%)

Query: 38  VATNSANYSPVSIAFT----------KFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSF 87
           V       S + I                S  ELG K++EV++ DL+ S +F+    +  
Sbjct: 3   VDVTGDIDSSLKIVVPALPAQAEVSTPAGSSTELGRKIAEVIASDLKGSGLFDPSGPNGI 62

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR-LRVEFRLWDVKDRKQIIGKKFFS 146
                   + P +  W +   Q LV G V   G +  + V   L+DV  ++++  + +  
Sbjct: 63  PTIAFPEVTSPAYDKWGAY--QALVQGFVRTTGGEADITVGCYLYDVALKQELTRQGYVV 120

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           SP  WR+ AH  +D IY  ++GE   F+SRI +++ES   G     L +MD DGAN R++
Sbjct: 121 SPRDWRRAAHKCADAIYARLSGESPFFDSRIAYIAESGPKGNRTKRLAIMDSDGANHRFI 180

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T  +  I   PRFSP+ + + Y +Y   + +R+Y+ D    +  + +    +   APR+S
Sbjct: 181 TNGQS-IALTPRFSPDYKSIVYVSY-LNNRVRIYVYDIGTGKQ-RLVTESSNATFAPRWS 237

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+  L S+      DIY V     A +RLT    I++  SYSPD  QIVFESDR G +
Sbjct: 238 PDGRSILFSMAIAGNTDIYRVSATGGAPQRLTTAPGIDVGGSYSPDGRQIVFESDRSGSQ 297

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Q+YVM ++GS Q+RIS      Y  P WSP+GDLIAFTK SG+ F I VM   G  ER+L
Sbjct: 298 QIYVMNADGSGQRRISHGG-GRYATPEWSPRGDLIAFTKISGD-FKIAVMTPSGDNERIL 355

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQWVGF 445
                 + P+WSP+GR L F R   G  G S+++ +DL G NE  I TP   SDP W   
Sbjct: 356 TNGWQDEQPSWSPNGRVLQFFRTTPGREGSSQVWQVDLTGVNERRIPTPLSGSDPAWGPL 415

Query: 446 M 446
           +
Sbjct: 416 L 416


>gi|254283986|ref|ZP_04958954.1| Tol-Pal system beta propeller repeat protein TolB [gamma
           proteobacterium NOR51-B]
 gi|219680189|gb|EED36538.1| Tol-Pal system beta propeller repeat protein TolB [gamma
           proteobacterium NOR51-B]
          Length = 435

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 104/437 (23%), Positives = 196/437 (44%), Gaps = 10/437 (2%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVSK 71
                + + L+         A +++  N    +P  IA   F    +      V+ ++  
Sbjct: 1   MRRFAVFVGLLALVLSAGASAQLQIEINQGVDNPTPIAVVPFGWQGVGTAPDDVARIIDS 60

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI--KEGKDRLRVEFR 129
           DL RS  F  +S+            I  F+DW +L ++ ++ GRV   + G   +R+E++
Sbjct: 61  DLARSGQFAPVSRRDMLSFPDRASDI-YFRDWRALSSEYVLIGRVSGARSGDGPVRIEYQ 119

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGI 188
           L+D   + +I       S    R +AH I+D +Y+ +TG  G F +R+L+VS +   +G 
Sbjct: 120 LFDAIRQLEIDSGTVSGSVQEIRMLAHQIADAVYERLTGIPGAFATRLLYVSVTRNPNGK 179

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L + D DGA    L   RD I   P +SP+  +VAY +++      +Y  + R   
Sbjct: 180 DFYRLVLSDADGARPIVLFEGRDPI-MAPSWSPDGSEVAYVSFETSRPA-IYRQNLRTG- 236

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +++ NF+ +  +P +S +G    + + KD + DIY ++L S    RLT    I+   +
Sbjct: 237 VREQLTNFKGLNNSPVWSPDGNSMAMVLSKDGSPDIYLMNLASKKLRRLTRHYAIDTEPT 296

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PD   ++F SDR G+ Q+Y    +     R++ +   +    V +  G  +A      
Sbjct: 297 WMPDGRSLLFTSDRGGRPQIYRYDLSSGQITRVTFEGSYNARARV-AQDGRNVALVHQQN 355

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            ++ I V     S+  +L   S  ++P+ +P+G  ++++ K+D        ++D   R  
Sbjct: 356 GQYHIAVHDLVTSRLTILTSTSLDESPSIAPNGSIVLYATKRDDKGILGAVAVDGGVRFS 415

Query: 429 TLINTPAYASDPQWVGF 445
                  +  +P W  +
Sbjct: 416 LPARDGGHVQEPAWSPY 432


>gi|238561025|ref|ZP_00442669.2| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei GB8 horse 4]
 gi|254175452|ref|ZP_04882112.1| tolB protein [Burkholderia mallei ATCC 10399]
 gi|254202357|ref|ZP_04908720.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei FMH]
 gi|254356407|ref|ZP_04972683.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei 2002721280]
 gi|147746604|gb|EDK53681.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei FMH]
 gi|148025404|gb|EDK83558.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei 2002721280]
 gi|160696496|gb|EDP86466.1| tolB protein [Burkholderia mallei ATCC 10399]
 gi|238525395|gb|EEP88823.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           mallei GB8 horse 4]
          Length = 430

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 116/444 (26%), Positives = 193/444 (43%), Gaps = 20/444 (4%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
             +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+ 
Sbjct: 1   MTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVTS 56

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           VV  DL RS  F+ +   S         +   F  W + GA   V G V +E   + +V 
Sbjct: 57  VVRGDLARSGKFSNVDAGS---TPVPETASVDFGAWKAKGANAFVAGSVNREPNGQYKVN 113

Query: 128 FRLWDVKDRKQIIGKKFFSSPAS--WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           F L+D   ++ + G    +S  +   RK  H I+D IYQ + G +G FN+R+ +V  +  
Sbjct: 114 FILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRTGN 173

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D  
Sbjct: 174 ----VYKLLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDLP 227

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R    I N +    AP +S +G+   +++       IYSV        RLT +  I+ 
Sbjct: 228 TGRRY-VISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSIDT 286

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIA 362
              YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+A
Sbjct: 287 EPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYN-TSPRVSPDGKLLA 345

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   +G  F + V          +   +  ++P+++ +G+ ++++R+  G +       D
Sbjct: 346 YISRTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYARQSGGRSVLAAVPSD 405

Query: 423 LNGRNETLINTPAYASDPQWVGFM 446
            +   + L        +P W  FM
Sbjct: 406 GSAPPQILSVQGGAIREPSWGPFM 429


>gi|325923403|ref|ZP_08185068.1| tol-pal system beta propeller repeat protein TolB [Xanthomonas
           gardneri ATCC 19865]
 gi|325546118|gb|EGD17307.1| tol-pal system beta propeller repeat protein TolB [Xanthomonas
           gardneri ATCC 19865]
          Length = 439

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 110/422 (26%), Positives = 209/422 (49%), Gaps = 11/422 (2%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGG-KVSEVVSKDLQRSDVFNLISQDS 86
           F       + +   SA+ +P+++    +          V+ VV  DL RS  F  +    
Sbjct: 21  FAQQQGLTIDIVGGSASATPIAVIPMAYQGSGTAPQTDVAAVVGADLDRSGQFRTLPAAQ 80

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS 146
             +K T    + +FQ W +L    +V GRV+  G+   RVE+ L+DV   ++++G    +
Sbjct: 81  IVEKPTRGTEV-QFQTWRTLKQNYIVVGRVMDAGEGAYRVEYELFDVAKGERLLGLAMTA 139

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
              + R ++H ++D IY+ ITG +G F +RI +V+ S   G ++ +L V D DG N + +
Sbjct: 140 RANAMRDVSHQMADAIYEKITGVRGAFWTRIAYVTASGSGGSMRFALMVADSDGYNPQTI 199

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S +  L  P +SP+ +K+AY +++  +   +YL D     A + + +FR +  AP FS
Sbjct: 200 VRSAEP-LLSPNWSPDGKKLAYVSFERGNS-SIYLQDISTG-ARELVSSFRGINGAPSFS 256

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+R  +++ +    +IY +DL S    +LTN   I+   +++PD   I F SDR G+ 
Sbjct: 257 PDGRRLALALSRSGNPEIYVMDLGSKQLTQLTNHFGIDTEPTWAPDGGSIYFTSDRGGRP 316

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--R 384
           Q+Y + ++G    R++     +    V S  G  +A  + SG  + I +M +        
Sbjct: 317 QIYQVAASGGSANRVTFQGNYNATASV-SFDGKKVAVAQGSGNTYRIAMMDRSLGSPSWS 375

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWV 443
            +   S  ++P+++P+   ++++ ++ G     LY++  + R  + L+       +P W 
Sbjct: 376 TISPGSLDESPSFAPNASMILYAAREGGRG--VLYAVSSDARVRQRLVLADGDVREPAWG 433

Query: 444 GF 445
            +
Sbjct: 434 PY 435


>gi|32699720|sp|Q9PC84|TOLB_XYLFA RecName: Full=Protein tolB; Flags: Precursor
          Length = 439

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 115/437 (26%), Positives = 213/437 (48%), Gaps = 13/437 (2%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGG---KVSEVVSK 71
             L +L+ L+      +    + +     N +   IA       D +G     VS VV+ 
Sbjct: 6   RWLAMLVGLLFPLSALTQQQGLTIDIVGGNTAATPIAVLPMPYHDSVGAPATDVSSVVAA 65

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  F  +      ++ T+   I RF  W +L    +V GRV+   +   RVE+ L+
Sbjct: 66  DLNRSGQFRTLPLGQIIERPTHGSEI-RFPTWQALKQDYIVVGRVLDARQGTYRVEYELF 124

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           DV++ K+++G    +  ++ R +AH ++D IY+ ITG +G F +RI +V+ S   G ++ 
Sbjct: 125 DVRNGKRMLGLAMTARASAMRDVAHQMADAIYEKITGLRGAFFTRIAYVTASGSHGAMRY 184

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +L V D DG N + +  S +  L  P +SP+ +K+AY +++ +    +Y+ D       +
Sbjct: 185 ALMVADSDGYNPQTIVRSAEP-LLSPDWSPDGKKLAYVSFE-KGGSSIYIQDIATGS-RE 241

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            + +FR +  AP F+ +G R  +S+ +    +IY +DL S    +LTN+  I+   ++S 
Sbjct: 242 LVSSFRGINAAPSFAPDGHRIALSLSRSGNPEIYVMDLVSKQLIQLTNSFGIDTEPAWSS 301

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I F SDR G+ Q+Y + S G    R++     +    V S     I   + SG  +
Sbjct: 302 DGKFIYFTSDRGGRPQIYKVASVGGTATRVTFQGNYNATTSV-SYDDKKIVVAQGSGNVY 360

Query: 372 AIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NE 428
            I +M +         L   S  ++P+++P+   ++++ ++ G     LY++  + R  +
Sbjct: 361 RIAMMDQSSGSTVWNTLSTGSLDESPSFAPNASMVLYAAREGGRG--VLYAVSADARVRQ 418

Query: 429 TLINTPAYASDPQWVGF 445
            L++  +   +P W  +
Sbjct: 419 RLVSVDSDVREPAWGPY 435


>gi|296283271|ref|ZP_06861269.1| translocation protein TolB [Citromicrobium bathyomarinum JL354]
          Length = 467

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 137/419 (32%), Positives = 212/419 (50%), Gaps = 15/419 (3%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSF 87
                 A  +    +AN                LG +++ V++ DLQ + +F     D+ 
Sbjct: 63  LAIPAFAAERDVATAANA----------QGTAALGAELARVITADLQNNGLFAPTGPDAL 112

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
            +      + P +  W   GA++LV G V      +L V   L+DV    ++    +   
Sbjct: 113 PKPNYPQITDPVWNMWRMRGAEMLVQGYVRPRADGKLVVGCYLYDVALNDELARSGWVVP 172

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           P+ WR+ AH  +D +Y  +TGE   F+SRI +++E+         L +MD DGAN R++T
Sbjct: 173 PSDWRRAAHKCADLVYSRLTGESPFFDSRIAYIAETGPKDNRTKRLAIMDSDGANHRFIT 232

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
             R      PR+SP+ +K+ Y +Y D +  R+Y+ D    +    +    +   APR+S 
Sbjct: 233 TGR-ATALTPRYSPDYRKLMYLSYVDGNP-RIYIYDIGTGKQT-LVTESSNPTFAPRWSP 289

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+  L S+  +   DIY V     A+ERLT+   I++  SYSPD ++IVFESDR G +Q
Sbjct: 290 DGRWVLYSMAVNGNTDIYRVSANGGASERLTDAPGIDVGGSYSPDGTRIVFESDRSGAQQ 349

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y+M ++GS+Q+RI+         P WSP+GD IAFT +    F I  M  DG   R L 
Sbjct: 350 IYMMNADGSNQRRITFFG-GRAATPEWSPRGDQIAFT-YIPGDFNIATMSPDGKNFRKLT 407

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           +    +APTW+P+GR L F R +     + +Y +DL G N   + TP  ASDP W   +
Sbjct: 408 DGWQDEAPTWAPNGRILQFFRTERNTGRTAIYQVDLTGENLRRLPTPVDASDPAWGPIL 466


>gi|126440889|ref|YP_001060215.1| translocation protein TolB [Burkholderia pseudomallei 668]
 gi|126451941|ref|YP_001067479.1| translocation protein TolB [Burkholderia pseudomallei 1106a]
 gi|134280578|ref|ZP_01767289.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei 305]
 gi|217420955|ref|ZP_03452460.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei 576]
 gi|237813605|ref|YP_002898056.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei MSHR346]
 gi|254191662|ref|ZP_04898165.1| putative TolB protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254258828|ref|ZP_04949882.1| putative TolB protein [Burkholderia pseudomallei 1710a]
 gi|254299065|ref|ZP_04966515.1| putative TolB protein [Burkholderia pseudomallei 406e]
 gi|126220382|gb|ABN83888.1| putative TolB protein [Burkholderia pseudomallei 668]
 gi|126225583|gb|ABN89123.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei 1106a]
 gi|134248585|gb|EBA48668.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei 305]
 gi|157809130|gb|EDO86300.1| putative TolB protein [Burkholderia pseudomallei 406e]
 gi|157939333|gb|EDO95003.1| putative TolB protein [Burkholderia pseudomallei Pasteur 52237]
 gi|217396367|gb|EEC36384.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei 576]
 gi|237506221|gb|ACQ98539.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei MSHR346]
 gi|254217517|gb|EET06901.1| putative TolB protein [Burkholderia pseudomallei 1710a]
          Length = 430

 Score =  365 bits (938), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 115/444 (25%), Positives = 192/444 (43%), Gaps = 20/444 (4%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
             +L  +  +   L+  GG    + HA V V       +   IA   FV+   L  +V+ 
Sbjct: 1   MTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVTS 56

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           VV  DL RS  F+ +   S         +   F  W + GA   V G V +E   + +V 
Sbjct: 57  VVRGDLARSGKFSNVDAGS---TPVPETASVDFGAWKAKGANAFVAGSVNREPNGQYKVN 113

Query: 128 FRLWDVKDRKQIIGKKFFSSPAS--WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           F L+D   ++ + G    +S  +   RK  H I+D IYQ + G +G FN+R+ +V  +  
Sbjct: 114 FILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRTGN 173

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D  
Sbjct: 174 ----VYKLLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDLP 227

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R    I N +    AP +S +G+   +++       IYSV        RLT +  I+ 
Sbjct: 228 TGRRY-VISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSIDT 286

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIA 362
              YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+A
Sbjct: 287 EPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYN-TSPRVSPDGKLLA 345

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       D
Sbjct: 346 YISRTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPSD 405

Query: 423 LNGRNETLINTPAYASDPQWVGFM 446
            +   + L        +P W  FM
Sbjct: 406 GSAPPQILSVQGGAIREPSWGPFM 429


>gi|329113830|ref|ZP_08242601.1| Protein TolB [Acetobacter pomorum DM001]
 gi|326696840|gb|EGE48510.1| Protein TolB [Acetobacter pomorum DM001]
          Length = 454

 Score =  365 bits (938), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 155/443 (34%), Positives = 243/443 (54%), Gaps = 19/443 (4%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
              L   +    ++ +  G F  +     ++  + A  +P+ I    F     LG K++E
Sbjct: 24  RSLLGASVAAGGIMAMPVGAFAAASAPEAEITVDQARTAPIPIIIPNFGGG--LGEKIAE 81

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V++ DL  + +F ++               P F    S+GA        +  G   +RVE
Sbjct: 82  VLTNDLNNTGLFKVMPGS-------TTSGTPDFATSKSMGAHAQ-VTGSVSGGGSSVRVE 133

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWDV   +QI G  + +S A+WR+IAH + D IYQ + GEKG F++RI F+S S   G
Sbjct: 134 MRLWDVLSHQQIQGTAYTTSAANWRRIAHIVGDVIYQRMLGEKGYFDTRIAFISRSGPRG 193

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  L VMD+DGAN R LT  +  +   PRFSP + ++A+ +Y +    RVYL D    
Sbjct: 194 HQRTRLAVMDQDGANARMLTTGK-WLTLTPRFSPVKDQIAFMSYANNRP-RVYLFDLTSG 251

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R  + +G F  +  APRFS +G+  ++SV ++   D+Y VDL S +  ++T++  I+ S 
Sbjct: 252 RQ-QILGEFEGISFAPRFSPDGRSVVLSVTRNGGSDLYVVDLASGSRRQITSSGAIDTSP 310

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD SQIVF SDR G  Q+Y+M ++G   +RIS   + +Y  PVWSP+GDLIAFT+ +
Sbjct: 311 CFSPDGSQIVFNSDRGGSPQIYIMPASGGGARRISY-GQGTYGSPVWSPRGDLIAFTRIA 369

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-----LYSID 422
           G  F++GVM  DG+ ER++ +   +++P++ P+GR L + R+     G       +  +D
Sbjct: 370 GGMFSLGVMAPDGTGERIMTQGFTVESPSFCPNGRVLAYCRQSRAGAGGAGFSSTIGMVD 429

Query: 423 LNGRNETLINTPAYASDPQWVGF 445
           + G N+ ++ TP  ASDP W   
Sbjct: 430 ITGFNDRVLPTPEAASDPAWSPL 452


>gi|254180824|ref|ZP_04887422.1| putative TolB protein [Burkholderia pseudomallei 1655]
 gi|184211363|gb|EDU08406.1| putative TolB protein [Burkholderia pseudomallei 1655]
          Length = 430

 Score =  365 bits (938), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 114/444 (25%), Positives = 192/444 (43%), Gaps = 20/444 (4%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
             +L  +  +   L+  GG    + HA V V       +   IA   F++   L  +V+ 
Sbjct: 1   MTKLGFRALVASCLIAAGG----AAHAQVNVLITGVGSTQFPIATANFLNEASLPQQVTS 56

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           VV  DL RS  F+ +   S         +   F  W + GA   V G V +E   + +V 
Sbjct: 57  VVRGDLARSGKFSNVDAGS---TPVPETASVDFGAWKAKGANAFVAGSVNREPNGQYKVN 113

Query: 128 FRLWDVKDRKQIIGKKFFSSPAS--WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           F L+D   ++ + G    +S  +   RK  H I+D IYQ + G +G FN+R+ +V  +  
Sbjct: 114 FILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRTGN 173

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  L + D DG N      S++ I+  P +SP+  KVAY +++    + VY+ D  
Sbjct: 174 ----VYKLLISDSDGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDLP 227

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R    I N +    AP +S +G+   +++       IYSV        RLT +  I+ 
Sbjct: 228 TGRRY-VISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSIDT 286

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIA 362
              YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+A
Sbjct: 287 EPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYN-TSPRVSPDGKLLA 345

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   +G  F + V          +   +  ++P+++ +G+ ++++ +  G +       D
Sbjct: 346 YISRTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPSD 405

Query: 423 LNGRNETLINTPAYASDPQWVGFM 446
            +   + L        +P W  FM
Sbjct: 406 GSAPPQILSVQGGAIREPSWGPFM 429


>gi|332525604|ref|ZP_08401759.1| translocation protein TolB [Rubrivivax benzoatilyticus JA2]
 gi|332109169|gb|EGJ10092.1| translocation protein TolB [Rubrivivax benzoatilyticus JA2]
          Length = 434

 Score =  365 bits (938), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 102/412 (24%), Positives = 198/412 (48%), Gaps = 15/412 (3%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
             +V  +      + IA   F     L   VS +V  DL RS +F +           + 
Sbjct: 35  QFRVDVSGVGARQIPIAIAPFRDEGALPTPVSGIVGADLARSGMFRVAGSPVAL----DE 90

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
            S+    DW + G   +V G V +    RL + F LWD+   +Q++ +      A  R  
Sbjct: 91  RSVVAAADWRARGVDAVVAGSVTRMADGRLDIRFTLWDIVKGEQLVAQSKLVLAADLRLT 150

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH I+D I++++TGE+G   +RI++V ++      + +L V D DG   +    S + I+
Sbjct: 151 AHRIADAIHEALTGERGVNATRIVYVVKAG----KRYTLNVTDADGEGGQVALASPEPII 206

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+ +++AY +++ +    V  +   I  + +++ +FR    AP +S +G+   +
Sbjct: 207 -SPAWSPDGRELAYVSFETQKA--VVWVQDLITGSRRKLADFRGSNSAPAWSPDGRELAM 263

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ +D    +Y++        RLT++  I+    Y+PD   I F SDR G  Q+Y +  +
Sbjct: 264 TLTRDGISQLYAMPRAGGTPRRLTSSSAIDTEPVYAPDGRSIFFVSDRGGGPQVYRLPLD 323

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G   +R++     +   P  SP G L+A+    G+ F +  +       R L +  + ++
Sbjct: 324 GGGPQRVTFTGGYN-ISPAVSPDGKLLAYISRQGDAFKLMTLDLAAGGVRTLTDTRDDES 382

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGF 445
           P+++P+G+ ++++ ++ G     L +  L+G  +  L+++ A   +P W  F
Sbjct: 383 PSFAPNGKLIVYATRQQGR--DVLMTTTLDGSFKTRLVSSGADMREPAWGPF 432


>gi|304413883|ref|ZP_07395300.1| translocation protein [Candidatus Regiella insecticola LSR1]
 gi|304283603|gb|EFL91998.1| translocation protein [Candidatus Regiella insecticola LSR1]
          Length = 433

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 98/434 (22%), Positives = 197/434 (45%), Gaps = 14/434 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK--VSEVVSKDLQR 75
           +++     +  +++A V++       +  P+++    +           ++ +V+ DL+ 
Sbjct: 7   VMLGFLMLWANALYAGVRIEITQGVDSARPIAVVPFTWQGSGVASEDKDIAAIVAADLRN 66

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  FN I +    ++ ++ + I     W++LG   +V G++    +    + ++L D   
Sbjct: 67  SGKFNPIDKTRMPERPSSAEEI-TPSAWSALGINAVVIGQIQPSVEGHYLISYQLVDTSG 125

Query: 136 R-KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
             K ++ +  +     W R  +HT SD+I++ +TG KG F +RI ++ + +        L
Sbjct: 126 TVKTVLAQNQYKIKQQWLRHASHTASDEIFEKLTGIKGAFRTRIAYIVQ-IHDKQRPYEL 184

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V D DG N +++     + L  P +SP+  K+AY T++        ++ T  +   + I
Sbjct: 185 RVADYDGHN-QFVVHRSAEPLMSPAWSPDGSKIAYVTFESGQ--SALVVQTLANSGIREI 241

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +F     AP FS +G +   ++ K  +++IY +DL S    ++T++   N   S+ PDS
Sbjct: 242 ASFPRHNGAPAFSPDGSKLAFALSKSGSLNIYLMDLASGHITQITDSRSNNTEPSWFPDS 301

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             + + SD+ G+ Q+Y +  N    +RI+     +    V S  G  +A    +     I
Sbjct: 302 QNLAYTSDQGGRPQVYKININQRAPERITWQGAQNQDVEV-SHDGKFMALVASNSGNQHI 360

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LIN 432
                     ++L +    + P+ SP+G  +I+S  K G  GS L  +  +GR +  L  
Sbjct: 361 VKQDLSTGAVQVLTDSFLDETPSISPNGLMIIYSSTKRG-VGSVLQLVSTDGRFKAHLPA 419

Query: 433 TPAYASDPQWVGFM 446
                S P W  ++
Sbjct: 420 NDGKFSFPAWSPYL 433


>gi|258543663|ref|YP_003189096.1| translocation protein TolB [Acetobacter pasteurianus IFO 3283-01]
 gi|256634741|dbj|BAI00717.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256637797|dbj|BAI03766.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256640851|dbj|BAI06813.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256643906|dbj|BAI09861.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256646961|dbj|BAI12909.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256650014|dbj|BAI15955.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256653004|dbj|BAI18938.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256656058|dbj|BAI21985.1| secretion system type I outer membrane protein TolB [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 454

 Score =  365 bits (936), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 154/443 (34%), Positives = 243/443 (54%), Gaps = 19/443 (4%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
              L   +    ++ +  G F  +     ++  + A  +P+ I    F     LG K++E
Sbjct: 24  RSLLGASVAAGGIMAMPVGAFAAASAPEAEITVDQARTAPIPIIIPNFGGG--LGEKIAE 81

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V++ DL  + +F ++               P F    S+GA        +  G   +RVE
Sbjct: 82  VLTNDLNNTGLFKVMPGS-------TTSGTPDFVTSKSMGAHAQ-VTGSVSGGGSSVRVE 133

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWDV   +QI G  + +S A+WR+IAH + D IY+ + GEKG F++RI F+S S   G
Sbjct: 134 MRLWDVLSHQQIQGTAYTTSAANWRRIAHIVGDVIYERMLGEKGYFDTRIAFISRSGPRG 193

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  L VMD+DGAN R LT  +  +   PRFSP + ++A+ +Y +    RVYL D    
Sbjct: 194 HQRTRLAVMDQDGANARMLTTGK-WLTLTPRFSPVKDQIAFMSYANNRP-RVYLFDLTSG 251

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R  + +G F  +  APRFS +G+  ++SV ++   D+Y VDL S +  ++T++  I+ S 
Sbjct: 252 RQ-QILGEFEGISFAPRFSPDGRSVVLSVTRNGGSDLYIVDLASGSRRQITSSGAIDTSP 310

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD SQIVF SDR G  Q+Y+M ++G   +RIS   + +Y  PVWSP+GDLIAFT+ +
Sbjct: 311 CFSPDGSQIVFNSDRGGSPQIYIMPASGGGARRISY-GQGTYGSPVWSPRGDLIAFTRIA 369

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK-----DGDTGSKLYSID 422
           G  F++GVM  DG+ ER++ +   +++P++ P+GR L + R+           S +  +D
Sbjct: 370 GGMFSLGVMAPDGTGERIMTQGFTVESPSFCPNGRVLAYCRQSRAGAGGAGFNSTIGMVD 429

Query: 423 LNGRNETLINTPAYASDPQWVGF 445
           + G N+ ++ TP  ASDP W   
Sbjct: 430 ITGFNDRVLPTPEAASDPAWSPL 452


>gi|167586273|ref|ZP_02378661.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           ubonensis Bu]
          Length = 431

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 108/443 (24%), Positives = 190/443 (42%), Gaps = 18/443 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G     + +A V V       +   IA   F +   L  +V+
Sbjct: 3   LMTKLGFRALVASCLIAAGS----AANAQVNVLITGVGSTQFPIATANFANEAGLPQQVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            +V  DL RS  F  I   S         +      W + GA   V G V ++   + +V
Sbjct: 59  SIVRADLARSGKFTNIDAGS---TPVPETASVDLGAWKAKGANAFVAGSVNRDASGQYKV 115

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V +S   
Sbjct: 116 NFILYDTVKQQSLGGLSLTANDGTLRTAGHKIADYIYQKLLGTRGVFATRLSYVIKSGN- 174

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L + D DG N R    S + I+  P +SPN  KVAY +++ +  + VY+ D   
Sbjct: 175 ---RYQLQISDSDGQNPRIALSSTEPII-SPAWSPNGTKVAYVSFERKKPI-VYIHDLPT 229

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    + + +    AP +S + +   +++       IY+V+       RLT +  I+  
Sbjct: 230 GRRY-IVSDQKGNNSAPAWSPDSQTLSVALSLTGNTQIYAVNSTGGGLRRLTQSNSIDTE 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+A+
Sbjct: 289 PFYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYN-TSPRVSPDGRLLAY 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +G  F + V          +   S+ ++P+++ +G+ L+++ +  G         D 
Sbjct: 348 ISRTGGGFKLYVQDLQTGAANAITNTSHDESPSFAANGQYLLYATQSGGRNVLAAVPSDG 407

Query: 424 NGRNETLINTPAYASDPQWVGFM 446
           +   + L        +P W  FM
Sbjct: 408 SAPPQILSVQGGSVREPSWGPFM 430


>gi|33603212|ref|NP_890772.1| translocation protein TolB [Bordetella bronchiseptica RB50]
 gi|67462004|sp|Q7WFN4|TOLB_BORBR RecName: Full=Protein tolB; Flags: Precursor
 gi|33568843|emb|CAE34601.1| putative TolB-like translocation protein [Bordetella bronchiseptica
           RB50]
          Length = 441

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 112/418 (26%), Positives = 193/418 (46%), Gaps = 15/418 (3%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
               A ++V  +    +   +A   F   D  G  ++EV+  DL R+  F LI+      
Sbjct: 35  QPAQAQLRVDISGTGATQYPVAIADFAVDDTHGRALAEVIRADLTRTGQFRLINAAG--- 91

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
              N DS     DW + GA  L  G + +    R  V +RL D   + Q+ G  F  +  
Sbjct: 92  SGLNVDSQVAHDDWRAKGADFLAYGSITRGPDGRYDVRYRLADTVKKGQLDGVAFSGTEQ 151

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
             R++AH I+D IY+ ITG +G F++RI +V +   +      L V D DG N +    S
Sbjct: 152 ELRRVAHQIADRIYEKITGVRGVFSTRIAYVLKRGST----YELQVADADGQNPQVALRS 207

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R+ I+  P +SP+  ++AY +++      V  + T    A   + NF+    AP +S +G
Sbjct: 208 REPII-SPSWSPDGSRLAYVSFESGKP--VVYVHTLATSARIPVANFKGNNSAPAWSPDG 264

Query: 270 KRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +  +++ +D    IY V         R+T +  I+   +++PD   I+F SDR G  Q+
Sbjct: 265 SQLAVALTRDGLSQIYIVSAGGGSNMRRITRSPGIDTEPNFTPDGRSIIFTSDRSGGPQI 324

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y    +G D +R++ +   +   P  SP G  + +       F I  +      E LL +
Sbjct: 325 YQTGLDGGDARRLTFNGGYN-ISPRISPDGSTLLYVARRDGAFRIASLNLSSGSETLLTD 383

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
             + Q+P+++P+G  ++++  ++G   S L  +  +GR  +TL        +P W  F
Sbjct: 384 GRDDQSPSFAPNGMQVLYAAIQNGR--SVLAGVSSDGRVRQTLSVLNGEIREPTWGPF 439


>gi|261868492|ref|YP_003256414.1| translocation protein TolB [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413824|gb|ACX83195.1| hypothetical protein D11S_1837 [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 426

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 193/441 (43%), Gaps = 22/441 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEV 68
           + + I +  L +++ GF      A V++  +    +  P+++   K+         ++E+
Sbjct: 1   MKVVIRIFGLFIMLLGF-AMVARAEVRIVIDEVMDSARPIAVVPFKWNGPGSAPANIAEI 59

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +S DL+ S  FN + +    Q+ T+   +   + W++LG + ++ G+V         + +
Sbjct: 60  ISADLRNSGKFNPLPESKMPQQPTSASEV-NPEAWSALGIEAVIVGQVTP-SNGGFDIAY 117

Query: 129 RLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D        +   ++       R  AHTISD+ ++ +TG +G F +RI +V +    
Sbjct: 118 QLVDTMGSVGSILSQNQYTVMQKWLRYGAHTISDETFEKLTGIRGAFRTRIAYVVQKN-G 176

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     + V D DG N +++     Q    P +SP+ +K+AY T++++    V  +   +
Sbjct: 177 GSQPYEVRVADYDGFN-QFIVNRSSQPFMSPAWSPDGKKLAYVTFENKKAQVV--LQDLV 233

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             A K + +F     AP FS +G R   +  KD  ++IY  +L S    +LT+    N  
Sbjct: 234 SMARKVVASFPGHNGAPAFSPDGSRLAFASSKDGVLNIYVTNLGSGQVSQLTSGAGNNTE 293

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD   IVF SDR G  Q+Y M ++G     I             S  G+L+     
Sbjct: 294 PSWSPDGQSIVFTSDRGGSPQVYRMSASGGGASLI-----GGRGSGQISSDGNLLVMVDV 348

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +     I           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR
Sbjct: 349 NN---NIVKKDLTSGSSEVLSSTFLDESPSISPNGIMVIYSSTQG--LGKVLQLVSTDGR 403

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L         P W  ++
Sbjct: 404 FKARLPGNDGQVKFPAWSPYL 424


>gi|238752127|ref|ZP_04613610.1| hypothetical protein yrohd0001_550 [Yersinia rohdei ATCC 43380]
 gi|238709704|gb|EEQ01939.1| hypothetical protein yrohd0001_550 [Yersinia rohdei ATCC 43380]
          Length = 386

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 94/393 (23%), Positives = 179/393 (45%), Gaps = 11/393 (2%)

Query: 57  SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV 116
                  +V  +V+ DL+ S  FN I      Q+ +    +     W +LG   +V G+V
Sbjct: 2   GPGTPPEEVGAIVAADLRNSGKFNPIDAARMPQQPSTAAEV-TPAAWTALGIDAVVVGQV 60

Query: 117 IKEGKDRLRVEFRLWDV--KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
                    V ++L D        +   ++  +    R  AHT SD++++ +TG KG F 
Sbjct: 61  QPSADGSYVVSYQLVDTSGAAGSVLAQNQYKVTKQWLRYSAHTASDEVFEKLTGIKGAFR 120

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +RI +V ++   G   + L V D DG N +++     + L  P +SP+  K+AY T++  
Sbjct: 121 TRIAYVVQTN-GGKFPHELRVSDYDGYN-QFVVHRSPEPLMSPAWSPDGSKIAYVTFESG 178

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                 ++ T  + A +++ +F     AP FS +G +   ++ K  ++++Y ++L S   
Sbjct: 179 K--SALVIQTLANGAIRQVASFPRHNGAPAFSPDGSKLAFALSKSGSLNLYVMNLASGQI 236

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            ++T+    N   S+ PDS  + + SD+ G+ Q+Y +  NG   +RI+ +   +    V 
Sbjct: 237 SQVTDGRSNNTEPSWFPDSQNLAYTSDQGGRPQVYKVNINGGAPQRITWEGSQNQNADV- 295

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           SP G  +     +G    I     +    ++L +    + P+ +P+G  +I+S  +    
Sbjct: 296 SPDGKFLVLVSSNGGAQHIAKQDLETGAVQVLTDTFLDETPSIAPNGTMVIYSSTQG--L 353

Query: 415 GSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           G+ L  +  +GR +  L  T      P W  ++
Sbjct: 354 GAVLQLVSTDGRFKARLPATDGQVKFPAWSPYL 386


>gi|33594232|ref|NP_881876.1| translocation protein TolB [Bordetella pertussis Tohama I]
 gi|67462002|sp|Q7VU03|TOLB_BORPE RecName: Full=Protein tolB; Flags: Precursor
 gi|33564307|emb|CAE43608.1| putative TolB-like translocation protein [Bordetella pertussis
           Tohama I]
 gi|332383646|gb|AEE68493.1| translocation protein TolB [Bordetella pertussis CS]
          Length = 438

 Score =  365 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 112/418 (26%), Positives = 193/418 (46%), Gaps = 15/418 (3%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
               A ++V  +    +   +A   F   D  G  ++EV+  DL R+  F LI+      
Sbjct: 32  QPAQAQLRVDISGTGATQYPVAIADFAVDDTHGRALAEVIRADLTRTGQFRLINAAG--- 88

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
              N DS     DW + GA  L  G + +    R  V +RL D   + Q+ G  F  +  
Sbjct: 89  SGLNVDSQVAHDDWRAKGADFLAYGSITRGPDGRYDVRYRLADTVKKGQLDGVAFSGTEQ 148

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
             R++AH I+D IY+ ITG +G F++RI +V +   +      L V D DG N +    S
Sbjct: 149 ELRRVAHQIADRIYEKITGVRGVFSTRIAYVLKRGST----YELQVADADGQNPQVALRS 204

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R+ I+  P +SP+  ++AY +++      V  + T    A   + NF+    AP +S +G
Sbjct: 205 REPII-SPSWSPDGSRLAYVSFESGKP--VVYVHTLATSARIPVANFKGNNSAPAWSPDG 261

Query: 270 KRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +  +++ +D    IY V         R+T +  I+   +++PD   I+F SDR G  Q+
Sbjct: 262 SQLAVALTRDGLSQIYIVSAGGGSNMRRITRSPGIDTEPNFTPDGRSIIFTSDRSGGPQI 321

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y    +G D +R++ +   +   P  SP G  + +       F I  +      E LL +
Sbjct: 322 YQTGLDGGDARRLTFNGGYN-ISPRISPDGSTLLYVARRDGAFRIASLNLSSGSETLLTD 380

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
             + Q+P+++P+G  ++++  ++G   S L  +  +GR  +TL        +P W  F
Sbjct: 381 GRDDQSPSFAPNGMQVLYAAIQNGR--SVLAGVSSDGRVRQTLSVLNGEIREPTWGPF 436


>gi|293390508|ref|ZP_06634842.1| Tol-Pal system beta propeller repeat protein TolB [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951042|gb|EFE01161.1| Tol-Pal system beta propeller repeat protein TolB [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 426

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 193/441 (43%), Gaps = 22/441 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEV 68
           + + I +  L +++ GF      A V++  +    +  P+++   K+         ++E+
Sbjct: 1   MKVVIRIFSLFIMLLGF-TMVARAEVRIVIDEVMDSARPIAVVPFKWNGPGSAPANIAEI 59

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +S DL+ S  FN + +    Q+ T+   +   + W++LG + ++ G+V         + +
Sbjct: 60  ISADLRNSGKFNPLPESKMPQQPTSASEV-NPEAWSALGIEAVIVGQVTP-SNGGFDIAY 117

Query: 129 RLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D        +   ++       R  AHTISD+ ++ +TG +G F +RI +V +    
Sbjct: 118 QLVDTMGSVGSILSQNQYTVMQKWLRYGAHTISDETFEKLTGIRGAFRTRIAYVVQKN-G 176

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     + V D DG N +++     Q    P +SP+ +K+AY T++++    V  +   +
Sbjct: 177 GSQPYEVRVADYDGFN-QFIVNRSSQPFMSPAWSPDGKKLAYVTFENKKAQVV--LQDLV 233

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             A K + +F     AP FS +G R   +  KD  ++IY  +L S    +LT+    N  
Sbjct: 234 SMARKVVASFPGHNGAPAFSPDGSRLAFASSKDGVLNIYVTNLGSGQVSQLTSGAGNNTE 293

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD   IVF SDR G  Q+Y M ++G     I             S  G+L+     
Sbjct: 294 PSWSPDGQSIVFTSDRGGSPQVYRMSASGGGASLI-----GGRGSGQISSDGNLLVMVDV 348

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +     I           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR
Sbjct: 349 NN---NIVKKDLTSGSSEVLSSTFLDESPSISPNGIMVIYSSTQG--LGKVLQLVSTDGR 403

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L         P W  ++
Sbjct: 404 FKARLPGNDGQVKFPAWSPYL 424


>gi|330815668|ref|YP_004359373.1| Putative TolB protein [Burkholderia gladioli BSR3]
 gi|327368061|gb|AEA59417.1| Putative TolB protein [Burkholderia gladioli BSR3]
          Length = 433

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 114/445 (25%), Positives = 196/445 (44%), Gaps = 20/445 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +  +L  +  +   L+  G     + +A V V       +   IA   FV+   L   V+
Sbjct: 3   LMTKLGFRALVASCLIAAGS----TANAQVNVLITGVGSTQFPIATANFVNEGGLPQSVT 58

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            VV  DL R+  F+ +   S     T P     +  W + GA  LV G V ++   +++V
Sbjct: 59  AVVRADLARTGKFSNVDAGSTPIPETAP---VDYGAWKAKGANALVAGTVNRDASGQVKV 115

Query: 127 EFRLWDVKDRKQIIGKKFF--SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           +F L+D   ++ + G          S RK  H I+D IYQ + G +G F++R+ +V+ S 
Sbjct: 116 DFMLFDTLKQQSLGGLSLTAGGDAESMRKTGHKIADFIYQKLMGVRGVFSTRLSYVTRSG 175

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                K  L + D DG N      S + I+  P +SP+  KVAY +++    + VY+ D 
Sbjct: 176 G----KYRLLISDSDGENAVPALTSSEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDL 229

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    I N +    AP +S +G+   +++       IYSV        RLT +  I+
Sbjct: 230 PTGRRY-VISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSATGTGLRRLTQSSSID 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLI 361
               YSPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+
Sbjct: 289 TEPFYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGSAQRVTFTGSYN-TSPRVSPDGKLL 347

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A+   +G  F + V          +   ++ ++P+++ +G+ ++++ + +G +       
Sbjct: 348 AYISRTGGGFKLYVQDLQTGAANAVTNTTHDESPSFAANGQYILYATQANGRSVLAAVPS 407

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D +   + L        +P W  FM
Sbjct: 408 DGSSPPQILPVQGGSFREPSWGPFM 432


>gi|115350731|ref|YP_772570.1| translocation protein TolB [Burkholderia ambifaria AMMD]
 gi|123027500|sp|Q0BHY7|TOLB_BURCM RecName: Full=Protein tolB; Flags: Precursor
 gi|115280719|gb|ABI86236.1| TolB, N-terminal domain protein [Burkholderia ambifaria AMMD]
          Length = 431

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 106/440 (24%), Positives = 185/440 (42%), Gaps = 14/440 (3%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
            L  K+    L+         + +A V V       +   IA   F +   L  +V+ +V
Sbjct: 2   RLMTKLGFRALVASCLIAAGAAANAQVNVLITGVGSTQFPIATANFANEAGLPQQVTSIV 61

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
             DL RS  F  I   S         +      W + GA   V G V +E   + +V F 
Sbjct: 62  RADLARSGKFTNIDAGS---TPVPETASVDLGAWKAKGANAFVAGSVNREANGQYKVNFI 118

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D   ++ + G    ++  + R   H I+D IYQ + G +G F +R+ +V ++      
Sbjct: 119 LYDTVKQQSLGGLSLTATDTTLRTAGHKIADYIYQKLLGVRGVFATRLSYVIKTGN---- 174

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D DG N R    S + I+  P +SP+  KVAY +++ +  + VY+ D    R 
Sbjct: 175 RYQLQISDSDGQNARIALSSTEPII-SPAWSPSGTKVAYVSFERKKPI-VYIHDLPTGRR 232

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              + + +    AP +S +     +++       IY+V+       RLT +  I+    Y
Sbjct: 233 Y-MVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNANGGGLRRLTQSSSIDTEPYY 291

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           SPD   I F SDR G  Q+Y M + G      +R++     +   P  SP G L+A+   
Sbjct: 292 SPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYN-TSPRISPDGKLLAYISR 350

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +G  F + V          +   +  ++P+++ +G+ L+++ +  G         D +  
Sbjct: 351 TGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYLLYATQSGGRNVLAAVPSDGSAP 410

Query: 427 NETLINTPAYASDPQWVGFM 446
            + L        +P W  FM
Sbjct: 411 PQILSVQGGSVREPSWGPFM 430


>gi|307294753|ref|ZP_07574595.1| Tol-Pal system beta propeller repeat protein TolB [Sphingobium
           chlorophenolicum L-1]
 gi|306879227|gb|EFN10445.1| Tol-Pal system beta propeller repeat protein TolB [Sphingobium
           chlorophenolicum L-1]
          Length = 449

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 150/421 (35%), Positives = 220/421 (52%), Gaps = 19/421 (4%)

Query: 38  VATNSANYSPVSIAFT----------KFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSF 87
           V     + S + I                S  ELG K++EV++ DL+ S +F+    +  
Sbjct: 35  VDVTDESSSNLKIVVPALPAQAEVSTPAGSSTELGRKIAEVIASDLKGSGLFDPSGPNGI 94

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR-LRVEFRLWDVKDRKQIIGKKFFS 146
                   + P +  W +   Q LV G V   G +  + V   L+DV  ++++  + +  
Sbjct: 95  PTIAFPEVTSPAYDKWGAY--QALVQGFVRTTGGEADITVGCYLYDVALKQELTRQGYVV 152

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           SP  WR+ AH  +D IY  ++GE   F+SRI +++ES   G     L +MD DGAN R++
Sbjct: 153 SPRDWRRAAHKCADAIYARLSGESPFFDSRIAYIAESGPKGNRTKRLAIMDSDGANHRFI 212

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T  +  I   PRFSP+ + + Y +Y   + +R+Y+ D    +  + +    +   APR+S
Sbjct: 213 TNGQS-IALTPRFSPDYKSIVYVSY-LNNRVRIYIYDIGTGKQ-RLVTESNNATFAPRWS 269

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+  L S+      D+Y V     A +RLT    I++  SYSPD  QIVFESDR G +
Sbjct: 270 PDGRNILFSMAVAGNTDVYRVSATGGAPQRLTTAPGIDVGGSYSPDGRQIVFESDRSGSQ 329

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Q+YVM ++GS Q+RIS      Y  P WSP+GDLIAFTK SG+ F I VM   G  ER+L
Sbjct: 330 QVYVMNADGSGQRRISHGG-GRYATPEWSPRGDLIAFTKISGD-FKIAVMTPSGDNERIL 387

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQWVGF 445
                 + P+WSP+GR L F R   G  G S+++ +DL G NE  I TP   SDP W   
Sbjct: 388 TNGWQDEQPSWSPNGRVLQFFRTTPGREGSSQVWQVDLTGVNERRIPTPLSGSDPAWGPL 447

Query: 446 M 446
           +
Sbjct: 448 L 448


>gi|88810552|ref|ZP_01125809.1| TolB [Nitrococcus mobilis Nb-231]
 gi|88792182|gb|EAR23292.1| TolB [Nitrococcus mobilis Nb-231]
          Length = 433

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 108/424 (25%), Positives = 200/424 (47%), Gaps = 14/424 (3%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKF---VSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
            T + A + +         + IA   F     +     ++  ++  DL R+ +   + + 
Sbjct: 17  STQVPAQLTIQITGGAEGALPIALVPFRVENGVPAPPEEMITIIRDDLYRTGLLQPLPRK 76

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL---RVEFRLWDVKDRKQIIGK 142
                    + +  FQ+W  LG   LV G +  +        +V F L DV    ++ GK
Sbjct: 77  DLIAHPATLEEV-NFQNWRVLGVDNLVVGALASDPDSGYHGYQVSFELLDVYKANRLTGK 135

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           ++   P + R + HTISD I+QS+ G  G FN++I +V     +    + L V D DG N
Sbjct: 136 RYRVRPDALRTLGHTISDIIFQSLFGRPGGFNTQIAYVEIERNADQPVHKLIVADADGHN 195

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + +  S+  I   P +SP++Q++ Y ++++     VY+ +    +  + + +F  +  A
Sbjct: 196 PQVILTSKAPI-MSPAWSPDRQRIGYVSFENGRS-EVYVQEVASGK-RRTVASFNGINSA 252

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +S  G R  +++ KD   +IY +DL S +  ++T+   I+    ++P+  QI+F SDR
Sbjct: 253 PAWSPQGNRLALTLSKDGNPEIYILDLASESLRQITHNSSIDTEPVWTPNGQQIIFTSDR 312

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G  Q+Y + S G   +R++ +   +   P  SP G L+A       KF I V+      
Sbjct: 313 GGSPQIYRLPSAGGKAERLTFEGSYNAR-PTLSPDGRLLALVHREDGKFKIAVLDLQTRL 371

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQ 441
            R+L +    ++P+++P+G +L++S    G   S+L ++ + GR +E L        +P 
Sbjct: 372 TRVLTDGPLDESPSFAPNGATLLYSSVLGGK--SELATVSIYGRAHERLGVFNNAVQEPT 429

Query: 442 WVGF 445
           W   
Sbjct: 430 WSPL 433


>gi|238026337|ref|YP_002910568.1| translocation protein TolB [Burkholderia glumae BGR1]
 gi|237875531|gb|ACR27864.1| Putative TolB protein [Burkholderia glumae BGR1]
          Length = 430

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 113/444 (25%), Positives = 195/444 (43%), Gaps = 20/444 (4%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
             +L  +  +   L+  G     + +A V V       +   IA   FV+   L   V+ 
Sbjct: 1   MTKLGFRSLVASCLIAAGS----AANAQVNVLITGVGSTQFPIATANFVNEAGLPQSVTA 56

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           VV  DL R+  F+ I   S      +  +   +  W + GA  LV G V +E   +++V+
Sbjct: 57  VVRADLARTGKFSNIDAGS---TPISESAPVDYSAWKAKGANALVAGTVNREANGQVKVD 113

Query: 128 FRLWDVKDRKQIIGKKFF--SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           F L+D   ++ + G            RK  H I+D IYQ + G +G F++R+ +V+ S  
Sbjct: 114 FMLFDTVKQQSLGGLSLTATGDVEGMRKTGHKIADFIYQKLLGVRGVFSTRLSYVTHSGG 173

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
               K  L + D DG N      S + I+  P +SP+  KVAY +++    + VY+ D  
Sbjct: 174 ----KYRLLISDSDGENAIPALTSSEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDLP 227

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R    I N +    AP ++ +G+   +++       IYSV        RLT +  I+ 
Sbjct: 228 TGRRY-VISNQKGNNSAPAWAPDGQTLAVALSLTGNTQIYSVSATGTGLRRLTQSSSIDT 286

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIA 362
              YSPD   I F SDR G+ Q+Y M + G      +R++     +   P  SP G L+A
Sbjct: 287 EPFYSPDGRWIYFTSDRGGQPQIYRMPAQGESAGAAQRVTFTGSYN-TSPRVSPDGKLLA 345

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   +G  F + V          +   ++ ++P+++ +G+ ++++ +  G +       D
Sbjct: 346 YISRTGGGFKLYVQDLQTGAANAVTNTTHDESPSFAANGQYILYATRAGGRSVLAAVPSD 405

Query: 423 LNGRNETLINTPAYASDPQWVGFM 446
            +   + L       S+P W  FM
Sbjct: 406 GSSPPQILPVQGGSFSEPSWGPFM 429


>gi|170730224|ref|YP_001775657.1| translocation protein TolB [Xylella fastidiosa M12]
 gi|226705900|sp|B0U2E8|TOLB_XYLFM RecName: Full=Protein tolB; Flags: Precursor
 gi|167965017|gb|ACA12027.1| TolB protein precursor [Xylella fastidiosa M12]
          Length = 439

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 114/437 (26%), Positives = 210/437 (48%), Gaps = 13/437 (2%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF---VSIDELGGKVSEVVSK 71
             L +L+ L+      +    + +     N +   IA        S       VS VV+ 
Sbjct: 6   RWLAILVGLLFPLSALTQQQGLTIDIVGGNTAATPIAVLPMPYHDSAGAPATDVSGVVAA 65

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  F  +      ++ T+   I RF  W +L    +V GRV+   +   RVE+ L+
Sbjct: 66  DLNRSGQFRTLPLGQITERPTHGSEI-RFPTWQALKQDYIVVGRVLDARQGTYRVEYELF 124

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           DV++ K+++G    +  ++ R +AH ++D IY+ ITG +G F +RI +V+ S   G ++ 
Sbjct: 125 DVRNGKRMLGLAMTARASAMRDVAHQMADAIYEKITGLRGAFFTRIAYVTASGSHGAMRY 184

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +L V D DG N + +  S +  L  P +SP+ +K+AY +++ +    +Y+ D       +
Sbjct: 185 ALMVADSDGYNPQTIVRSAEP-LLSPDWSPDGKKLAYVSFE-KGGSSIYIQDIATGS-RE 241

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            + +FR +  AP F+ +G R  +S+ +    +IY +DL S    +LTN+  I+    +S 
Sbjct: 242 LVSSFRGINAAPSFAPDGHRIALSLSRSGNPEIYVMDLVSKQLIQLTNSFGIDTEPVWSS 301

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I F SDR G+ Q+Y + S G    R++     +    V S     I   + SG  +
Sbjct: 302 DGKFIYFTSDRGGRPQIYKVASVGGTATRVTFQGNYNATASV-SYDDKKIVVAQGSGNVY 360

Query: 372 AIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NE 428
            I +M +         L   S  ++P+++P+   ++++ ++ G     LY++  + R  +
Sbjct: 361 RIAMMDQSSGSTVWNTLSTGSLDESPSFAPNASMVLYAAREGGRG--VLYAVSADARVRQ 418

Query: 429 TLINTPAYASDPQWVGF 445
            L++  +   +P W  +
Sbjct: 419 RLVSVDSDVREPAWGPY 435


>gi|171463097|ref|YP_001797210.1| Tol-Pal system beta propeller repeat protein TolB [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|171192635|gb|ACB43596.1| Tol-Pal system beta propeller repeat protein TolB [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 403

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 111/416 (26%), Positives = 203/416 (48%), Gaps = 17/416 (4%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           + +       S   IA  +F   ++L   V+E++ +DL RS  F      +  +   + D
Sbjct: 1   MNIEITGVGQSLYPIAVMRFKDENKLLTSVTEIIRQDLARSGYFKNTENGNAVE---SDD 57

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
             P ++ W + GA  LV G V++ G  +  + ++L+D++    + G    SS  + R  A
Sbjct: 58  GTPNYKSWAARGADALVVGSVVQTGGSQFEIHYKLFDIRKSVSLGGLNLNSSADNLRAAA 117

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H I+DDI   + GE+G  ++R+ +V +       +  L + D DG NIR    S + I+ 
Sbjct: 118 HKIADDIIYKLLGERGVSSTRLSYVIKDG----KRYRLVISDADGQNIRNAMNSSEPII- 172

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +SP+ +KVAY +++D   + +Y+ +    R+   + N +    AP +S +GK+  IS
Sbjct: 173 SPSWSPDGKKVAYVSFEDRKPV-IYVHELATGRSIS-LSNQKGNNSAPAWSPDGKKLAIS 230

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + KD    IY ++       RLT    I+    YS D   I F SDR G  Q+Y M ++G
Sbjct: 231 LSKDGNTQIYGINADGTGLHRLTRGNTIDTEPQYSADGRYIYFTSDRGGNPQIYRMSADG 290

Query: 336 ---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                 KR++  K+     P  SP G  +A+    G  + + ++       + L + ++ 
Sbjct: 291 EQAEGVKRVTF-KQGFVTSPRISPDGKYLAYIANIGGAYRLYILNLATGDAQALTDGTSD 349

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVGFMD 447
           ++P+++ +GR +++S K  G     L ++ ++G ++ +++ P      P W  FMD
Sbjct: 350 ESPSFAANGRYVLYSTKVGGKRI--LAAVSVDGNSKRVLSIPGSDVRQPSWGPFMD 403


>gi|15838495|ref|NP_299183.1| translocation protein TolB [Xylella fastidiosa 9a5c]
 gi|9106990|gb|AAF84703.1|AE004009_10 TolB protein precursor [Xylella fastidiosa 9a5c]
          Length = 430

 Score =  363 bits (931), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 114/433 (26%), Positives = 212/433 (48%), Gaps = 13/433 (3%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGG---KVSEVVSKDLQR 75
           +L+ L+      +    + +     N +   IA       D +G     VS VV+ DL R
Sbjct: 1   MLVGLLFPLSALTQQQGLTIDIVGGNTAATPIAVLPMPYHDSVGAPATDVSSVVAADLNR 60

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  F  +      ++ T+   I RF  W +L    +V GRV+   +   RVE+ L+DV++
Sbjct: 61  SGQFRTLPLGQIIERPTHGSEI-RFPTWQALKQDYIVVGRVLDARQGTYRVEYELFDVRN 119

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            K+++G    +  ++ R +AH ++D IY+ ITG +G F +RI +V+ S   G ++ +L V
Sbjct: 120 GKRMLGLAMTARASAMRDVAHQMADAIYEKITGLRGAFFTRIAYVTASGSHGAMRYALMV 179

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG N + +  S +  L  P +SP+ +K+AY +++ +    +Y+ D       + + +
Sbjct: 180 ADSDGYNPQTIVRSAEP-LLSPDWSPDGKKLAYVSFE-KGGSSIYIQDIATGS-RELVSS 236

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           FR +  AP F+ +G R  +S+ +    +IY +DL S    +LTN+  I+   ++S D   
Sbjct: 237 FRGINAAPSFAPDGHRIALSLSRSGNPEIYVMDLVSKQLIQLTNSFGIDTEPAWSSDGKF 296

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           I F SDR G+ Q+Y + S G    R++     +    V S     I   + SG  + I +
Sbjct: 297 IYFTSDRGGRPQIYKVASVGGTATRVTFQGNYNATTSV-SYDDKKIVVAQGSGNVYRIAM 355

Query: 376 MKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLIN 432
           M +         L   S  ++P+++P+   ++++ ++ G     LY++  + R  + L++
Sbjct: 356 MDQSSGSTVWNTLSTGSLDESPSFAPNASMVLYAAREGGRG--VLYAVSADARVRQRLVS 413

Query: 433 TPAYASDPQWVGF 445
             +   +P W  +
Sbjct: 414 VDSDVREPAWGPY 426


>gi|88705611|ref|ZP_01103321.1| TolB protein precursor [Congregibacter litoralis KT71]
 gi|88700124|gb|EAQ97233.1| TolB protein precursor [Congregibacter litoralis KT71]
          Length = 428

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 94/421 (22%), Positives = 185/421 (43%), Gaps = 10/421 (2%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVSKDLQRSDVFNLISQDS 86
           P   +A + +        P  +A   F           ++EVV +D +RS  F+ +++  
Sbjct: 13  PGMANAQLVIEITQGVDDPTPVAVVPFAWEGAGTAPADMAEVVQEDFERSGQFSPVARAD 72

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS 146
                +  + +  ++DW ++ ++ ++ GR   EG   L + + L+DV  + +I       
Sbjct: 73  MLGFPSREEEV-FYRDWRAIASEYVLIGRARGEGDG-LSLSYELYDVLRQTRIAEGTVTG 130

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRY 205
                R +AH +SD +Y+ +TG  G F +R+++VS     +G     L + D DGA    
Sbjct: 131 PVGEARMLAHRVSDAVYEKLTGIPGAFATRLIYVSVTRNPTGKDYYRLTLADSDGARPIV 190

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           L  SR+ I   P +SP+ ++VAY +++                  +++ NFR +  +P +
Sbjct: 191 LLESREPI-MSPSWSPDGKQVAYVSFETGRP--AIFRQVLASGEREQLTNFRGLNSSPAW 247

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G    + + KD + DIY +D+ S    R+T    I+   S+ PD    +F SDR G+
Sbjct: 248 SPDGNSMAMVLSKDGSPDIYLMDMASRRLTRVTRHYAIDTEPSWMPDGRSFLFTSDRGGR 307

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            Q+Y         +R++ +   +    V +  G  +        ++ I +     ++ ++
Sbjct: 308 PQIYRYDLRSGLTERVTFEGSYNARARV-AQDGRNVVLVHQREGEYQIAIHDLVTNRLQV 366

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
           L      ++P+ +P+G  ++++ K          S+D  G    L        +P W  +
Sbjct: 367 LTNTDLDESPSIAPNGSMVLYATKYGDRGILSAVSVDG-GVKFRLPARSGDVREPAWSPY 425

Query: 446 M 446
           M
Sbjct: 426 M 426


>gi|331007792|ref|ZP_08330906.1| tolB protein precursor [gamma proteobacterium IMCC1989]
 gi|330418401|gb|EGG92953.1| tolB protein precursor [gamma proteobacterium IMCC1989]
          Length = 430

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 112/440 (25%), Positives = 215/440 (48%), Gaps = 19/440 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSP--VSIAFTKFVSIDELGGKVSEVVS 70
           MK  + LL+ +I   F +  +  + +  +    +P  + +    +   + L   VS +++
Sbjct: 1   MKSLIPLLVSII--LFSSFSYGELTIRISKGVDNPTVIGVVPFNYTGSNALSEDVSTIIA 58

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR--LRVEF 128
            DL+RS  F+ I   +     + P+++  ++DW  LG++ LV G +   G +    ++ F
Sbjct: 59  NDLRRSGQFSPIDSSNMLSFPSLPENVV-YRDWRLLGSEYLVIGEISPNGPNGLGYQLVF 117

Query: 129 RLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            L+DV  +K II  +         R +AH +SD +Y++ITG +G F++ I++V +   S 
Sbjct: 118 SLFDVVSQKTIIFNEPIVVGADGLRDMAHYVSDVVYEAITGIRGAFSTDIIYVEQRSNS- 176

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  L   D DGA  + L  S   I   P +SP+ +KVAY +++      +++ D +  
Sbjct: 177 --QYQLIRADMDGARPQILVKSSQPI-LSPSWSPDGRKVAYVSFETGRPA-IFIQDLQTA 232

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  +++ N+  +  AP +S +GK+  + + KD   +IY +DL + A  R+T    I+   
Sbjct: 233 Q-REQVTNYTGLNGAPAWSPDGKKLALVLSKDGNPEIYILDLATRALTRITKHFSIDTEP 291

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +++ D + I+F S+R GK Q+Y+  +     +R++ + + +      +P G  I      
Sbjct: 292 TWTADGAGIIFTSNRGGKPQIYLASATEGYPQRLTFEGDYNARAQ-LTPDGKNIVMVHRR 350

Query: 368 GEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-G 425
              F I     +    ++L  E S  ++PT +P+G +LI++ K  G     L S+ L+ G
Sbjct: 351 EGVFHIATQNLETGTVKVLTTETSLDESPTIAPNGATLIYATKAGGKGI--LASVSLDAG 408

Query: 426 RNETLINTPAYASDPQWVGF 445
                 +T     +P W  F
Sbjct: 409 TRFAFPSTSGDVREPAWSPF 428


>gi|238797730|ref|ZP_04641224.1| hypothetical protein ymoll0001_12380 [Yersinia mollaretii ATCC
           43969]
 gi|238718371|gb|EEQ10193.1| hypothetical protein ymoll0001_12380 [Yersinia mollaretii ATCC
           43969]
          Length = 386

 Score =  362 bits (930), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 95/393 (24%), Positives = 177/393 (45%), Gaps = 11/393 (2%)

Query: 57  SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV 116
                  ++  +V  DL+ S  FN I      Q+ +    +     W +LG   +V G+V
Sbjct: 2   GPGTPPEEIGAIVGADLRNSGKFNPIDAARMPQQPSTAAEV-TPAAWTALGIDAVVVGQV 60

Query: 117 IKEGKDRLRVEFRLWDV--KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
                    V ++L D        +   ++  +    R  AHT SD++++ +TG KG F 
Sbjct: 61  QPSADGSYVVSYQLVDTSGAAGSVLAQNQYKVTKQWLRYAAHTASDEVFEKLTGIKGAFR 120

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +RI +V ++   G   + L V D DG N +++     Q L  P +SP+  K+AY T++  
Sbjct: 121 TRIAYVVQTN-GGKFPHELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKIAYVTFESG 178

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                 ++ T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S   
Sbjct: 179 K--SALVIQTLANGAIRQVASFPRHNGAPAFSPDGTKLAFALSKSGSLNLYVMDLGSGQI 236

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            ++T+    N   S+ PDS  + + SD+ G+ Q+Y +  NG   +RI+ +   +    V 
Sbjct: 237 SQVTDGRSNNTEPSWFPDSQNLAYTSDQGGRPQVYKVNINGGAPQRITWEGSQNQNADV- 295

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           SP G  +     +G    I          ++L +    + P+ +P+G  +I+S  +    
Sbjct: 296 SPDGKFLVLVSSNGGAQHIAKQDLVTGAVQVLTDTFLDETPSIAPNGTMVIYSSTQG--L 353

Query: 415 GSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           G+ L  +  +GR +  L  T      P W  ++
Sbjct: 354 GAVLQLVSTDGRFKARLPATDGQVKFPAWSPYL 386


>gi|254482467|ref|ZP_05095706.1| Tol-Pal system beta propeller repeat protein TolB [marine gamma
           proteobacterium HTCC2148]
 gi|214037158|gb|EEB77826.1| Tol-Pal system beta propeller repeat protein TolB [marine gamma
           proteobacterium HTCC2148]
          Length = 432

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 105/437 (24%), Positives = 203/437 (46%), Gaps = 10/437 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVS 70
           MK  +  ++ L+         A + +       +P +IA   F           ++ VV 
Sbjct: 1   MKRLILAIVPLLFALAALGARAELTIEITQGMDNPTAIAVVPFAWQGPGTAPEDIAWVVD 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F+ +S+     + +  + I  ++DW ++ ++ L+ GRV  +G  ++R+E+ L
Sbjct: 61  SDLARSGQFSPVSRSDMLGRPSTQNDI-FYRDWRAIESEYLLIGRVSAQGT-QMRIEYEL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGII 189
           +DV  +KQ        S    R ++H +SD IYQ +TG +G F +R+L+VS   V  G  
Sbjct: 119 YDVLRQKQAHKGVEVGSVNEARMLSHRVSDAIYQKLTGIRGAFATRLLYVSVTRVPGGKD 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L + D DGA    L  SR+ +   P +SP+  +++Y +++      +Y  +     A
Sbjct: 179 YYRLTLADSDGARPIVLLESREPV-MAPGWSPDGTQISYVSFESGRPA-IYRQNLSTG-A 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +++ NF+ +  AP +S +G    + + KD + DIY ++L +    R+T    I+   ++
Sbjct: 236 REQLTNFKGLNGAPAWSPDGNTMAMVLSKDGSPDIYLMNLMTKKLTRITRHYAIDTEPTW 295

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PD   ++F SDR G+ Q+Y         +R++ +   +    V +  G  +        
Sbjct: 296 MPDGRSLMFTSDRGGRPQIYRYDLRTGTTERVTFEGGYNARARV-AQDGRNVVLVHQQNG 354

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +F I ++    ++ ++L      ++P+ +P+G  +++  K  G       S+D  G    
Sbjct: 355 QFHIALLDLVTNRLQVLTSTQLDESPSIAPNGSMVLYGTKHAGRGILAAVSVDG-GVKFR 413

Query: 430 LINTPAYASDPQWVGFM 446
           L +      +P W  +M
Sbjct: 414 LPSRDGDVREPAWSPYM 430


>gi|269959053|ref|YP_003328842.1| translocation protein [Anaplasma centrale str. Israel]
 gi|269848884|gb|ACZ49528.1| translocation protein [Anaplasma centrale str. Israel]
          Length = 441

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 165/445 (37%), Positives = 245/445 (55%), Gaps = 15/445 (3%)

Query: 11  LNMKINLCLLLVLIGGFFPTS-IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS--- 66
           + +    C+L  +           A + V     N   V I+     S   L  +V    
Sbjct: 1   MRVFFFACVLPAVSAFLLCCQGAVAALGVDITKGNVERVRISVAPMHSSTNLEKEVGKSC 60

Query: 67  -EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
             VV  DL  + +F+   +       T P+ +P    W S+G  VLVTG + +  +DR++
Sbjct: 61  VRVVLHDLNSTGIFDASWKLPAGGFGTTPEGMPDSDAWTSVGRDVLVTGSIKEFSQDRVK 120

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           V   +WDV   +Q+ GK F  +  +WR+ AH++SD IY  ITGE G FN+RI +V+E+ +
Sbjct: 121 VRLFIWDVASGRQLSGKSFNFAVGNWRRAAHSMSDSIYSRITGEGGYFNTRIAYVAETGL 180

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G  +  + +MD+DGAN  Y+T S  + +  PRFSP+ + + Y +Y  +    + L D  
Sbjct: 181 PGSRR--IAIMDQDGANNVYIT-STGEFVSTPRFSPDARSLVYMSY-AKSSGSIVLHDLE 236

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +G  R +  +PRFS +GK  L+S     A +IYS+DL+S  + RLTN   IN 
Sbjct: 237 TG-YSTALGGVRGVNSSPRFSPDGKHVLLSESAQGATNIYSIDLKSGKSTRLTNNKSINT 295

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           SASYSPD   IVF SDR G+ QLYVM ++G++Q+RIS  K   Y  PVWSP+GD IAFTK
Sbjct: 296 SASYSPDKKSIVFNSDRSGRPQLYVMNADGTNQRRISSGK-GGYSAPVWSPRGDWIAFTK 354

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG----SKLYSI 421
             G+ F IGVMK DGS ERLL +   + +P+WSP+GR ++F+++          S+L ++
Sbjct: 355 ADGKNFHIGVMKPDGSGERLLAKGHMVDSPSWSPNGRVILFTQQDPPSATHPFRSRLVTV 414

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D+ G N   ++ P  AS+  W   +
Sbjct: 415 DITGTNTQTLDVPTNASNAHWSPVL 439


>gi|317402474|gb|EFV83042.1| TolB protein [Achromobacter xylosoxidans C54]
          Length = 440

 Score =  362 bits (929), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 114/417 (27%), Positives = 195/417 (46%), Gaps = 15/417 (3%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
              A ++V  +    +   +A   F   D  G  ++EV+  DL R+  F LIS       
Sbjct: 35  PAQAQLRVDISGTGATQYPVAIADFAVDDAHGRALAEVIRADLTRTGQFRLISAAG---S 91

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
             N DS     DW + GA  +  G +++    R  V +RL D   + Q+ G  F  +   
Sbjct: 92  GLNVDSPIAHDDWRAKGADFIAYGSIVRGNDGRYDVRYRLADTVKKGQLDGVAFSGTEQE 151

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R++AH I+D IY+ ITG +G F++RI +V +   +      L V D DG N +    SR
Sbjct: 152 LRRVAHQIADRIYEKITGVRGVFSTRIAYVLKQGAT----YELQVADADGQNPQVALRSR 207

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           + I+  P +SP+  K+AY +++      V  + T    A   + NF+    AP +S +G 
Sbjct: 208 EPII-SPSWSPDGSKLAYVSFESGKP--VVYVHTLATSARVPVANFKGNNSAPGWSPDGT 264

Query: 271 RALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +  +++ +D    IY V        +R+T +  I+   S++PD   I+F SDR G  Q+Y
Sbjct: 265 QLAVALTRDGLSQIYIVSAAGGSNMKRVTRSPGIDTEPSFTPDGRSIIFTSDRSGGPQIY 324

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
               +G D +R++ +   +   P  SP G  + +       F I  +      E LL + 
Sbjct: 325 QTGLDGGDARRLTFNGGYN-ISPRISPDGSTLLYVARRDGAFRIASLNLSSGSENLLTDG 383

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
            + Q+P+++P+G  ++++  ++G   S L  +  +GR  +TL        +P W  F
Sbjct: 384 RDDQSPSFAPNGMQVLYAAIQNGR--SVLAGVSSDGRVRQTLSVLNGEIREPTWGPF 438


>gi|260912913|ref|ZP_05919398.1| tol-Pal system beta propeller repeat protein TolB [Pasteurella
           dagmatis ATCC 43325]
 gi|260632903|gb|EEX51069.1| tol-Pal system beta propeller repeat protein TolB [Pasteurella
           dagmatis ATCC 43325]
          Length = 432

 Score =  362 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 100/444 (22%), Positives = 189/444 (42%), Gaps = 22/444 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEV 68
           + +   +  LL+L+      +  A V++  +    +  P+++   K+         ++++
Sbjct: 1   MKLVARVWSLLILLCFSVLQTAQAEVRIVIDEGVDSARPIAVVPFKWNGPGSAPADIADI 60

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           ++ DL+ S  FN I  +   Q+ T+   +   + W SLG   +V G+V         + +
Sbjct: 61  IASDLRNSGKFNPIPVNRMPQQPTSVAEV-NPEAWASLGIDAVVVGQVTP-ANGGFNIAY 118

Query: 129 RLWDV-----KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           +L D           +   ++  +    R  AHT+SD+ ++ +TG KG F +RI ++ + 
Sbjct: 119 QLVDTIGATGSAGAVLAQNQYTVTNKWLRYGAHTVSDETFEKLTGIKGAFRTRIAYIVQK 178

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              G     + V D DG N +++     Q L  P +S + +K+AY ++++     V  + 
Sbjct: 179 N-GGSQPYEVRVSDYDGFN-QFIVNRSSQPLMSPAWSADGKKLAYVSFENRKSQLV--VQ 234

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                A K + +F+    AP FS +G R   +  +D  ++IY ++L S    +LT     
Sbjct: 235 DLGSGARKVVASFKGHNGAPAFSPDGSRLAFASSQDGVLNIYVMNLGSGQIAQLTRGAGN 294

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N   S+SPD   IVF SDR G  Q+Y M + G     +S    +  +    +  G  +  
Sbjct: 295 NTEPSWSPDGQTIVFTSDRSGSPQVYQMSATGGGASLVSAGGRS--YSGQITADGSTLIM 352

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                    I           +L      ++P+ SP+G  +I+S  +    G  L  +  
Sbjct: 353 ISGD----NIIKKDLVSGSTEVLSSTFLDESPSISPNGIMIIYSSTQG--LGKVLQLVSA 406

Query: 424 NGRNE-TLINTPAYASDPQWVGFM 446
           +GR +  L         P W  ++
Sbjct: 407 DGRFKARLPGNDGQVKFPAWSPYL 430


>gi|33598302|ref|NP_885945.1| translocation protein TolB [Bordetella parapertussis 12822]
 gi|67462003|sp|Q7W476|TOLB_BORPA RecName: Full=Protein tolB; Flags: Precursor
 gi|33566860|emb|CAE39075.1| putative TolB-like translocation protein [Bordetella parapertussis]
          Length = 441

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 111/418 (26%), Positives = 192/418 (45%), Gaps = 15/418 (3%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
               A ++V  +    +   +A   F   D  G  ++EV+  DL R+  F LI+      
Sbjct: 35  QPAQAQLRVDISGTGATQYPVAIADFAVDDTHGRALAEVIRADLTRTGQFRLINAA---D 91

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
              N DS     DW + GA  L  G + +    R  V +RL D   + Q+ G  F  +  
Sbjct: 92  SGLNVDSQVAHDDWRAKGADFLAYGSITRGPDGRYDVRYRLADTVKKGQLDGVAFSGTEQ 151

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
             R++AH I+D IY+ ITG +G F++RI +V +   +      L V D DG N +    S
Sbjct: 152 ELRRVAHQIADRIYEKITGVRGVFSTRIAYVLKRGST----YELQVADADGQNPQVALRS 207

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R+ I+  P +SP+  ++AY +++      V  + T    A   + NF+    AP +S +G
Sbjct: 208 REPII-SPSWSPDGSRLAYVSFESGKP--VVYVHTLATSARIPVANFKGNNSAPAWSPDG 264

Query: 270 KRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +  +++ +D    IY V         R+T +  I+   +++PD   I+F SDR G  Q+
Sbjct: 265 SQLAVALTRDGLSQIYIVSAGGGSNMRRITRSPGIDTEPNFTPDGRSIIFTSDRSGGPQI 324

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y    +G D +R++ +   +   P  SP G  + +       F I  +      E LL +
Sbjct: 325 YQTGLDGGDARRLTFNGGYN-ISPRISPDGSTLLYVARRDGAFRIASLNLSSGSETLLTD 383

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
             + Q+P+++P+G  ++++  ++G   S L  +  + R  +TL        +P W  F
Sbjct: 384 GRDDQSPSFAPNGMQVLYAAIQNGR--SVLAGVSSDRRVRQTLSVLNGEIREPTWGPF 439


>gi|198282216|ref|YP_002218537.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665098|ref|YP_002424581.1| tol-pal system beta propeller repeat protein TolB
           [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198246737|gb|ACH82330.1| Tol-Pal system beta propeller repeat protein TolB
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218517311|gb|ACK77897.1| tol-pal system beta propeller repeat protein TolB
           [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 422

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 120/431 (27%), Positives = 203/431 (47%), Gaps = 13/431 (3%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
           K    L + L+   F     A + V       S + IA   F         V+EVV  DL
Sbjct: 3   KRFWTLAIFLLAWAFVLPAQAALTVEITKNVASALPIAIPSFGPGIAGQPSVAEVVRNDL 62

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
           + S +F +I    +      P  + +  DW ++GA  L  G V         V   +++V
Sbjct: 63  RHSGLFRVIDPAGYPADPRAPGGV-KAADWTAVGATGLAVGSVEPR-NGGYAVNVYVYNV 120

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
              +++   +F  S A     AH ++D IYQ+ TG+ G F SRI +V ++  +      L
Sbjct: 121 STGQELTAHRFTCSAAELHMTAHHVADVIYQAFTGKPGPFASRIAYVRQTGAN----YEL 176

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V + DG N   +   R  + F P +SP+ +++AY TY +   + +Y+ D    +  + I
Sbjct: 177 LVAESDGWNPHPIVRGRMPV-FSPVWSPDNRRLAYVTYANARAV-IYVQDLATGQ-RQSI 233

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                ++ AP FS NG     +       ++Y  +LQ+    +LT+   IN S ++SPD 
Sbjct: 234 APGGEIVSAPAFSPNGTELAYARSSGGHTELYVANLQTGQRRQLTHDDAINTSPTWSPDG 293

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           S+I+F SDR G  Q+Y M ++G    R+S D   +   PV+SP G+ IAF   +   +A+
Sbjct: 294 SRIIFVSDRAGGPQIYAMNASGGAAHRLSYDGSYNA-SPVYSPAGNAIAFIHRTNGVYAL 352

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            VM  DGS  R+L    N   P+++ +G+ +++  ++ G     L  + L+G+   ++++
Sbjct: 353 AVMNPDGSGVRVLDAQGNCDHPSFAGNGQMILYGTQRGGRK--VLAEVSLDGKTMAILHS 410

Query: 434 P-AYASDPQWV 443
                S P W 
Sbjct: 411 NAGEDSQPAWS 421


>gi|303256190|ref|ZP_07342206.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderiales
           bacterium 1_1_47]
 gi|331001246|ref|ZP_08324872.1| Tol-Pal system beta propeller repeat protein TolB [Parasutterella
           excrementihominis YIT 11859]
 gi|302860919|gb|EFL83994.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderiales
           bacterium 1_1_47]
 gi|329568973|gb|EGG50769.1| Tol-Pal system beta propeller repeat protein TolB [Parasutterella
           excrementihominis YIT 11859]
          Length = 437

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 117/446 (26%), Positives = 196/446 (43%), Gaps = 14/446 (3%)

Query: 1   MSLR-FFIAEELNMKINLCLLLVLIGGFFPT-SIHAFVKVATNSANYSPVSIAFTKFVSI 58
           M +R   +  +L +   + L  V + G        A + V       +   IA   F   
Sbjct: 1   MEMRERMVRRDLGLDRRVFLKAVGLAGIAAAEPAFAQLFVNIQGVGANQFPIAIQPFFGN 60

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
            E    ++E++  DL RS  F L+S D+     T  D  P ++  ++ G      G V +
Sbjct: 61  SEAPENIAEIIGNDLVRSGFFRLVSCDAA----TALDKDPDWKALSTAGVGAFADGSVTR 116

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
               R  ++FRL+D   +++     + S     R  AH I+D I++ +TGEKGDF +RI 
Sbjct: 117 AADGRYEIKFRLFDPVKKQETDEASYISPKDDLRLYAHKIADRIFERLTGEKGDFATRIA 176

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +VS+    G    ++ V D DG N +     R  I+    +SPN +++AY +++      
Sbjct: 177 YVSQQ---GKNNYAIMVADSDGYNPQVALRIRHPIISI-DWSPNGRQIAYTSFETGKP-T 231

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V++ D    +  +++  FR    AP FS +G    +++ KD    IY +D+      + T
Sbjct: 232 VWIHDLSTGK-RRQVAAFRGNNSAPAFSPDGGTLAVALSKDGGTKIYLLDVNGQNLRQFT 290

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               I+   ++SPD   I F SDR G  Q+Y     G   +RIS    A    P  SP+ 
Sbjct: 291 TGSSIDTEPAFSPDGKYIYFTSDRGGNPQIYRKPVVGGSAERISF-GNAYAISPAVSPKN 349

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           D +A+   +G  F +            L E    ++P++SP+G  +I++ +  G      
Sbjct: 350 DQVAYIVRTGGHFKLVQQDLATGNVIPLSEIGKNESPSYSPNGNMIIYASEVGGKGVLST 409

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
            S D + R+  L  T     +P W  
Sbjct: 410 VSTDGSTRS-RLSGTSGDIREPSWGP 434


>gi|332528330|ref|ZP_08404330.1| translocation protein TolB [Hylemonella gracilis ATCC 19624]
 gi|332042201|gb|EGI78527.1| translocation protein TolB [Hylemonella gracilis ATCC 19624]
          Length = 433

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 111/420 (26%), Positives = 200/420 (47%), Gaps = 15/420 (3%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
              HA  +V       + V  +   F     +  K+S +V  DL+RS  F  +  +    
Sbjct: 4   APAHAQFRVEVAGVGLTQVPFSVAPFRGEAAIQQKISAIVLADLERSGQFRSVVLNK--A 61

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
              +  + P    W   G+  LV G V +    R  V FRLWDV   K + G+ F  S A
Sbjct: 62  DALDETARPDLAAWRQAGSDALVAGSVTRMADGRFDVRFRLWDVVAGKDLGGQSFLVSAA 121

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
             R  AH ++D +Y+ +TG+KG F++RI +V+++      ++SL V D DG   +    S
Sbjct: 122 DLRLSAHRVADYVYEQLTGDKGVFSTRIAYVTKT----DQRHSLWVADADGEAAQPALSS 177

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            + I+  P +SP+ +++AY +++    + VY+ +    R  + + +FR    AP +S +G
Sbjct: 178 PEPII-SPTWSPDGRQLAYVSFESRRPV-VYIHEVSTGR-RRLVASFRGSNSAPAWSPDG 234

Query: 270 KRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +   +++ +D    +Y++DL + A E  RLT +  I+   +YS D   I F SDR G  Q
Sbjct: 235 RFLAVTLSRDGGSQLYTLDLNNLAAEPLRLTRSNGIDTEPTYSADGRFIYFVSDRGGSPQ 294

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y + + G + +R++     +   P  S  G  +A+      +F + VM+       +L 
Sbjct: 295 IYRLPAKGGNPERVTFTGTYN-ISPALSADGRWLAYISRINGEFKLHVMELASGAVTMLT 353

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
              + + P+++P+ R L+++ K++      L +  L+G     L        +P W  F+
Sbjct: 354 NTVSDENPSFAPNSRLLLYATKQNDR--EALMTTTLDGAIKARLSGQGGDIREPDWGPFV 411


>gi|89094843|ref|ZP_01167776.1| TolB, N-terminal:TolB, N-terminal [Oceanospirillum sp. MED92]
 gi|89080898|gb|EAR60137.1| TolB, N-terminal:TolB, N-terminal [Oceanospirillum sp. MED92]
          Length = 436

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 107/441 (24%), Positives = 201/441 (45%), Gaps = 13/441 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHA---FVKVATNSANYSPVSIAFTKFV--SIDELGGKVSE 67
           MK  +  L+ L    F  +  A    + +        P  +A   F       L   ++ 
Sbjct: 1   MKNIVVFLVALYSTMFAVNSFASDGDLAIEITKGVDEPTPVAVVPFSWDGSSALPEDIAR 60

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +VS DL R+ +F ++ + +        D +  F+DW     + LV GR        L VE
Sbjct: 61  IVSADLGRTGLFAMMERKNMLSFPARRDQV-FFRDWRVSNTEFLVIGRQQPAANGELVVE 119

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVS 186
           F L+DV   + ++ ++      + R IAH ISD IY+ +TG +G F++RI++V+  +   
Sbjct: 120 FELYDVLKEQPLLAERVTGRRDNMRGIAHYISDMIYEKLTGIRGAFSTRIVYVTAHAFGE 179

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G ++  L + D DGA    +    + I   P +S +  K+AY +++     R+Y+     
Sbjct: 180 GKVRYRLKMADADGARPITIREQSEPI-MSPTWSRDATKLAYVSFETGKP-RIYIQHLAT 237

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +  +R+ +FR +  AP +S +G +  + + KD   +IY  DL+S    R+T+   I+  
Sbjct: 238 GK-RERLPSFRGLNGAPAWSPDGTKLALVLSKDGNPEIYIQDLRSPRLIRVTHHYGIDTE 296

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPD   ++F SDR G+ Q+Y +       +RI+ +   +      +  G  +A    
Sbjct: 297 PTWSPDGQSLIFTSDRGGQPQIYRIHLPTRQLERITYEGNYNSRG-RLTLDGRFLAMVHR 355

Query: 367 SGEK-FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             +  F I V      +  +L +    ++PT +P+G  ++++ +K         ++D N 
Sbjct: 356 GNDNVFRIAVQDLKTGRLDVLTDTFLDESPTIAPNGSIILYATQKGVKGVLGGVTLDGNV 415

Query: 426 RNETLINTPAYASDPQWVGFM 446
           R   L +      +P W  ++
Sbjct: 416 RF-ILPSASGDVREPAWSPYL 435


>gi|28198796|ref|NP_779110.1| translocation protein TolB [Xylella fastidiosa Temecula1]
 gi|32699695|sp|Q87CZ5|TOLB_XYLFT RecName: Full=Protein tolB; Flags: Precursor
 gi|28056887|gb|AAO28759.1| TolB protein precursor [Xylella fastidiosa Temecula1]
 gi|307579949|gb|ADN63918.1| translocation protein TolB [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 439

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 113/437 (25%), Positives = 209/437 (47%), Gaps = 13/437 (2%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF---VSIDELGGKVSEVVSK 71
             L +L+ L+      +    + +     N +   IA        S       VS VV+ 
Sbjct: 6   RWLAMLVGLLFPLSALTQQQGLTIDIVGGNTAATPIAVLPMPYHDSAGAPATDVSGVVAA 65

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  F  +      ++ T+   I RF  W +L    +V GRV+   +   RVE+ L+
Sbjct: 66  DLNRSGQFRTLPLGQITERPTHGSEI-RFPTWQALKQDYIVVGRVLDARQGTYRVEYELF 124

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           DV++ K+++G    +  ++ R +AH ++D IY+ ITG +G F +RI +V+ S   G ++ 
Sbjct: 125 DVRNGKRMLGLAMTARASAMRDVAHQMADAIYEKITGLRGAFFTRIAYVTASGSHGAMRY 184

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +L V D DG N + +  S +  L  P +S + +K+AY +++ +    +Y+ D       +
Sbjct: 185 ALMVADSDGYNPQTIVRSAEP-LLSPDWSSDGKKLAYVSFE-KGGSSIYIQDIATGS-RE 241

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            + +FR +  AP F+ +G R  +S+ +    +IY +DL S    +LTN+  I+    +S 
Sbjct: 242 LVSSFRGINAAPSFAPDGHRIALSLSRSGNPEIYVMDLVSKQLIQLTNSFGIDTEPVWSS 301

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I F SDR G+ Q+Y + S G    R++     +    V S     I   + SG  +
Sbjct: 302 DGKFIYFTSDRGGRPQIYKVASVGGAATRVTFQGNYNASASV-SYDDKKIVVAQGSGNVY 360

Query: 372 AIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NE 428
            I +M +         L   S  ++P+++P+   ++++ ++ G     LY++  + R  +
Sbjct: 361 RIAMMDQSSGSTVWNTLSTGSLDESPSFAPNASMVLYAAREGGRG--VLYAVSADARVRQ 418

Query: 429 TLINTPAYASDPQWVGF 445
            L++  +   +P W  +
Sbjct: 419 RLVSVDSDVREPAWGPY 435


>gi|71909662|ref|YP_287249.1| translocation protein TolB [Dechloromonas aromatica RCB]
 gi|71849283|gb|AAZ48779.1| TolB, N-terminal:WD40-like Beta Propeller [Dechloromonas aromatica
           RCB]
          Length = 437

 Score =  360 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 100/412 (24%), Positives = 190/412 (46%), Gaps = 14/412 (3%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
            + +    A  + + +    F         V+  V  DL+RS +F L+   +      + 
Sbjct: 37  QLSIEITGAGANRIPVTIVDFPGDPTAARVVTATVRADLERSGLFKLVDNGTA---AFDE 93

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
           ++     +W   GA  L  G + +    R+   FRL+D +    + G  + ++ +  R  
Sbjct: 94  NAPVNHAEWKGKGADALAAGSIARSTDGRMEARFRLYDTQKGVSLGGAAYVTNNSQLRAA 153

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            H I+D IY+ +TGEKG F++RI +V    V    +  L + D DG N      S + I+
Sbjct: 154 GHRIADFIYEKLTGEKGVFSTRIAYV----VKARGQFLLQIADSDGQNAATALSSTEPII 209

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+  ++AY +++ +    V  + T        + NF+    AP +S +G++  +
Sbjct: 210 -SPVWSPDGGRLAYVSFEKKKP--VIYVHTLASGQRHIVANFKGSNSAPAWSPDGRKLAV 266

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + KD    IYSV+   +  +R+T +  I+    YS D   I F SDR G  Q+Y + ++
Sbjct: 267 VLSKDGNSQIYSVNADGSGLQRITQSSGIDTEPRYSADGGTIYFTSDRGGSPQVYQVGAS 326

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G D KR++ +   +   P  +P G  +AF      +F + VM     Q +++ + +  ++
Sbjct: 327 GGDAKRVTFEGSYNV-SPRPAPDGKSLAFISRREGRFQLAVMDLASRQVQVVSDSNKDES 385

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
           P+++P+ R ++ + +  G     L ++  +GR  + L        +P W  +
Sbjct: 386 PSFAPNSRMILIATEIGGRG--VLSAVSSDGRIKQRLSVAAGDVREPAWGPY 435


>gi|217969213|ref|YP_002354447.1| translocation protein TolB [Thauera sp. MZ1T]
 gi|217506540|gb|ACK53551.1| Tol-Pal system beta propeller repeat protein TolB [Thauera sp.
           MZ1T]
          Length = 425

 Score =  360 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 103/411 (25%), Positives = 187/411 (45%), Gaps = 15/411 (3%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
            + +       S   +    F +   L   V++VV  DL+RS +F LI            
Sbjct: 26  QLSIEITGTGASRFPVIIPIFENEGRLPQSVTDVVRADLERSGLFTLIDTGPLPMP---E 82

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
              P      S GA  ++TG +I     R  V FRL+D + ++++       SPA  R +
Sbjct: 83  SVAPDLAAVRSRGADAVLTGSLIPMADGRYDVRFRLFDAQKQQELGAMSLPMSPAQNRLV 142

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            H I+D +Y+ +TG  G F +RI +V +S  +      L + D DG N      SR+ I+
Sbjct: 143 GHRIADFVYEKLTGLPGYFATRIAYVIKSGPN----FELQIADADGMNAATALRSREPII 198

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+ Q++AY +++ +    +  + T      + + NF+    AP +S +G +  +
Sbjct: 199 -SPSWSPDGQRLAYVSFEQKKP--IVYVHTLATGQRRVVANFKGSNSAPSWSPDGSQLAV 255

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + KD    +Y++    +   RL  +  I+    +  D   I F SDR G  Q+Y + ++
Sbjct: 256 VLTKDGLSQLYAIGADGSGVRRLAQSSGIDTEPFWGADG-HIYFTSDRGGSPQIYRIPAS 314

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G   +R+S +   +   P  S  G L+AF   +  +F + V      Q  +L + +  ++
Sbjct: 315 GGSAQRVSFEGNYNVT-PRLSFDGKLLAFITRNAGRFQVAVQDVATRQTTILTDSARDES 373

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
           P+++P+GR ++++    G     L ++  +GR  + L    A   +P W  
Sbjct: 374 PSFAPNGRMILYATDTGGRG--VLSAVSTDGRIRQRLTVQAADVREPAWGP 422


>gi|319943002|ref|ZP_08017285.1| TolB protein [Lautropia mirabilis ATCC 51599]
 gi|319743544|gb|EFV95948.1| TolB protein [Lautropia mirabilis ATCC 51599]
          Length = 425

 Score =  360 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 104/435 (23%), Positives = 199/435 (45%), Gaps = 17/435 (3%)

Query: 14  KINLCLLLVLIGGFFPTSIHAF-VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +    L ++    F   S+ A  +++  +      V +A   F    +   ++  V+ +D
Sbjct: 3   RRAFHLGILASALFMAGSLSAQSMRIDVSGVGARQVPLALAPFNGAGQAPQQLDVVIQED 62

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           LQRS +F L++      +  + +S          GA  ++ G V      RL   ++L D
Sbjct: 63  LQRSGMFRLVN----LTETLSENSPLDMSALRGQGADSVLVGSVQPVANARLEFRYKLAD 118

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
              +  I      +  +  R   H I+D +Y+ +TG KG F++RI FV++       +  
Sbjct: 119 TVRQSVITEATMTAGESDVRLAGHRIADIVYEKLTGIKGIFSTRIAFVTKQGN----RYR 174

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V D DG N++    + + I+  P +SP+ +++AY +++ +  + VY+ D    +  K 
Sbjct: 175 LNVADWDGQNVQTALNAGEPII-SPAWSPDGKRLAYVSFETKKPV-VYVHDLASGQ-RKA 231

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSP 311
           +  F+    AP +S +G+   +++ +D    IY V         RLT +  I+    YSP
Sbjct: 232 VAKFKGSNSAPAWSHDGRSLAVTLTRDGGSQIYQVSADGGESARRLTQSSSIDTEPVYSP 291

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   + F SDR G  Q+Y M SNG    R++     +   P  SP G  +A+      +F
Sbjct: 292 DGKFLYFTSDRGGAPQIYRMPSNGGAASRVTFGSSYNV-SPRISPDGQQMAYVTQRNGRF 350

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETL 430
            I +       E LL +    ++P+++P+G+ ++++ +  G     L ++  +GR  + L
Sbjct: 351 LIALKDLQSGDETLLTDTGEEESPSFAPNGQWVMYTTRAGGR--EYLMAVSTDGRVKQRL 408

Query: 431 INTPAYASDPQWVGF 445
            ++ +   +P W  +
Sbjct: 409 SSSTSSVREPAWGPY 423


>gi|85374728|ref|YP_458790.1| translocation protein TolB [Erythrobacter litoralis HTCC2594]
 gi|84787811|gb|ABC63993.1| Tol biopolymer transport system [Erythrobacter litoralis HTCC2594]
          Length = 471

 Score =  360 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 142/417 (34%), Positives = 216/417 (51%), Gaps = 17/417 (4%)

Query: 42  SANYSPVSIAFTKFV------------SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
             N   + IA   F                 LG +++ V+S +L+ + +F     D   +
Sbjct: 59  EGNLDDLGIAIPAFATDRDVATPANAQGTGALGAELARVISNNLRNNGLFKPSGPDGLPR 118

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
                 + P++  W++ GA++LV G V   G   L V   L+D+  R +++   +   PA
Sbjct: 119 PTFPQITDPQWAVWSNRGAEMLVHGYVRARGDGNLVVGCYLYDMALRDELVRSGWVVPPA 178

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            WR+ AH  SD +Y  +TGE   F+SRI +++E+         L +MD DGAN R++T  
Sbjct: 179 DWRRAAHKCSDLVYSRLTGESPFFDSRIAYIAETGPKDNRTKRLAIMDSDGANHRFITTG 238

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R      PR+SP+ +++ Y +Y D +  R+Y+ D    R  + +    +   APR+S +G
Sbjct: 239 R-ATALTPRYSPDYRRLLYLSYVDGNP-RIYIYDIGTGRQ-QLVTESTNPTFAPRWSPDG 295

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +  L S+  +   DIY V  +   + RLT    I++  SYSPD SQIVFESDR G +Q+Y
Sbjct: 296 RWILYSMAVNGNTDIYRVSAEGGPSVRLTTEPGIDVGGSYSPDGSQIVFESDRSGSQQVY 355

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +M S+G++Q+RIS         P WSP+GD IAFT +    F I VM  +G   R L   
Sbjct: 356 IMNSDGTNQRRISFFG-GRAATPEWSPRGDQIAFT-YIPGDFNIAVMSPNGRNFRKLSNG 413

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
              +APTW+P+GR + F R +     + LY +DL G N   +NTP  ASDP W   +
Sbjct: 414 WQDEAPTWAPNGRIIQFFRTERNTGRTALYQVDLTGDNLRRLNTPVDASDPAWGPIL 470


>gi|226194238|ref|ZP_03789837.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei Pakistan 9]
 gi|225933703|gb|EEH29691.1| Tol-Pal system beta propeller repeat protein TolB [Burkholderia
           pseudomallei Pakistan 9]
          Length = 421

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 111/431 (25%), Positives = 185/431 (42%), Gaps = 16/431 (3%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFN 80
           +         + HA V V       +   IA   FV+   L  +V+ VV  DL RS  F+
Sbjct: 1   MASCLIAAGGAAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVTSVVRGDLARSGKFS 60

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
            +   S         +   F  W + GA   V G V +E   + +V F L+D   ++ + 
Sbjct: 61  NVDAGS---TPVPETASVDFGAWKAKGANAFVAGSVNREPNGQYKVNFILYDTVKQQSLG 117

Query: 141 GKKFFSSPAS--WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           G    +S  +   RK  H I+D IYQ + G +G FN+R+ +V  +         L + D 
Sbjct: 118 GLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRTGN----VYKLLISDS 173

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG N      S++ I+  P +SP+  KVAY +++    + VY+ D    R    I N + 
Sbjct: 174 DGQNAIPALTSKEPII-SPAWSPSGTKVAYVSFELRKPV-VYIHDLPTGRRY-VISNQKG 230

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
              AP +S +G+   +++       IYSV        RLT +  I+    YSPD   I F
Sbjct: 231 NNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSIDTEPFYSPDGKWIYF 290

Query: 319 ESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            SDR G  Q+Y M + G      +R++     +   P  SP G L+A+   +G  F + V
Sbjct: 291 TSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYN-TSPRVSPDGKLLAYISRTGGGFKLYV 349

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                     +   +  ++P+++ +G+ ++++ +  G +       D +   + L     
Sbjct: 350 QDLQSGAANAVTNTTRDESPSFAANGQYILYATQSGGRSVLAAVPSDGSAPPQILSVQGG 409

Query: 436 YASDPQWVGFM 446
              +P W  FM
Sbjct: 410 AIREPSWGPFM 420


>gi|329893685|ref|ZP_08269819.1| tolB protein precursor [gamma proteobacterium IMCC3088]
 gi|328923612|gb|EGG30924.1| tolB protein precursor [gamma proteobacterium IMCC3088]
          Length = 433

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 104/437 (23%), Positives = 201/437 (45%), Gaps = 11/437 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSP--VSIAFTKFVSIDELGGKVSEVVS 70
           MK     ++V +  F      A + +       +P  ++I+   +         V+ V+ 
Sbjct: 1   MKAFFLSVVVSVATFLSPVARAELVIEITQGIDNPTVIAISPFAWEGPGVAPEDVAFVIQ 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F  +++++     +  D    F+DW  + AQ L+ GR+   G+  L  +F L
Sbjct: 61  NDLYRSGQFAPVARENMLGTPSR-DEDIFFRDWRMVNAQYLLIGRLS--GEQTLTADFAL 117

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +DV  +  +I     +     R +AH I+D +Y ++TG  G F +++L+V+ + + G   
Sbjct: 118 YDVNKQTLVIQGSEQAVRGEVRTLAHRIADRVYTALTGIPGAFATKLLYVAVTPIPGEKD 177

Query: 191 N-SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L + D DGA  R L  SR+ I   P +SP+  ++AY +++      ++  + +   A
Sbjct: 178 YYELTLADSDGARPRVLLASREPI-LAPTWSPDATEIAYVSFETSRPA-IFRQNLQTG-A 234

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +++  FR +  +P +S +GKR  + + KD   DIY +DL++ A ER+T    I+   ++
Sbjct: 235 REQLTAFRGLNGSPSWSPDGKRMAMVLSKDGNPDIYVLDLETYALERITRHYDIDTEPTW 294

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PD   ++F SDR G+ Q+Y          R++ +   +    V +  G  +        
Sbjct: 295 MPDGKSLLFTSDRPGRPQIYRYDFVTGLTDRVTYEGSYNARARV-AQDGRNVVLVHQQDG 353

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I V+  +  +   L      ++P+ +P+G  ++++ K+ G       S+D  G    
Sbjct: 354 DYKIAVLDLETRRLTALTSTDLDESPSIAPNGSMVLYATKQAGRGILAAVSVDG-GARFN 412

Query: 430 LINTPAYASDPQWVGFM 446
           L        +P W  ++
Sbjct: 413 LPARDGEVREPSWSPYL 429


>gi|146283138|ref|YP_001173291.1| translocation protein TolB [Pseudomonas stutzeri A1501]
 gi|145571343|gb|ABP80449.1| TolB protein [Pseudomonas stutzeri A1501]
          Length = 384

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 102/391 (26%), Positives = 190/391 (48%), Gaps = 12/391 (3%)

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           L   ++E++  D++ + +F  I + +     T    I  ++DW +LGAQ ++ G +   G
Sbjct: 2   LPEDMAEIIGNDMRNTGIFQPIPRQNMISMPTRGSEII-YRDWKALGAQYVMVGNIEPAG 60

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
             RL+  + +++V   +Q++      SP   R +AH  +D  ++ +TG KG F++R+L+V
Sbjct: 61  -GRLQARYEVFNVTTEQQVMSGTVGGSPDQLRDMAHHAADQSFEKLTGIKGAFSTRLLYV 119

Query: 181 SESVVSG-IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +   + G   + +L   D DGA    L  SR+ I   PR+SP+ +++AY +++ +   R+
Sbjct: 120 TAERMGGANTRYTLQRSDYDGARAVTLLQSREPI-LSPRYSPDGRRIAYVSFEQKRP-RI 177

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           ++      R  ++I NF  +  AP FS +G R    + KD   +IY +DL S   +RLTN
Sbjct: 178 FVQHIDTGR-REQITNFEGLNGAPAFSPDGNRLAFVLSKDGNPEIYVMDLGSRQLQRLTN 236

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              I+    +  D   I + SDR GK Q+Y  +   +  +R++     +  +P  S    
Sbjct: 237 HYAIDTEPFWGADGQTIYYTSDRAGKPQVYKQRLGSNSAERVTFVGNYNA-NPKLSADEK 295

Query: 360 LIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            +           F +          R+L + S  ++PT +P+G  LI++ ++ G     
Sbjct: 296 TLVMIHRQDGYTNFKVAAQDLQRGNLRILSDTSLDESPTVAPNGTMLIYATRQQGRG--V 353

Query: 418 LYSIDLNGRNETLINTP-AYASDPQWVGFMD 447
           L  + +NGR    + T      +P W  +++
Sbjct: 354 LMLVSINGRVRLPLPTAQGEVREPSWSPYLN 384


>gi|330991878|ref|ZP_08315827.1| Protein tolB [Gluconacetobacter sp. SXCC-1]
 gi|329760899|gb|EGG77394.1| Protein tolB [Gluconacetobacter sp. SXCC-1]
          Length = 456

 Score =  359 bits (921), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 159/449 (35%), Positives = 244/449 (54%), Gaps = 22/449 (4%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
           S R F+     +   L    +   G          ++  + A  +P+ I      S   +
Sbjct: 23  SRRGFM--GAGVAGGLMATPLFTAGAAHAQAAGEAEITVDQARTAPIPIVLPSLGSG--V 78

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
             +V++V+S DL    +F  IS          P   P F  + S+GA+  VTG+V+++G 
Sbjct: 79  AQQVTDVISADLGNCGLFRPISASM-------PQGTPDFASYKSMGARAAVTGKVVEQGS 131

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             LRVEFRLWDV   KQI G  + ++   WR+IAH I+D IY  + GE+G FN+RI +++
Sbjct: 132 -SLRVEFRLWDVLVGKQIQGTAYTAAAQDWRRIAHVIADVIYNRMLGEQGYFNTRIAYIA 190

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            S         L +MD+DGA+ RYLT  +  +   PRF+P   ++A+ +Y +    RVYL
Sbjct: 191 RSGPRAHQTTRLAIMDQDGADSRYLTNGQ-WLTLTPRFNPANSELAFMSYANYRP-RVYL 248

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +    +  + +G+F  +  APRF+ +G+  ++SV +    DIY VDL + +  +LT + 
Sbjct: 249 FNLNTGQQ-RLLGDFSGISFAPRFAPDGRSVILSVTRGGGSDIYLVDLANMSRRQLTASG 307

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I+ S S+SPD SQIVF SDR G  QLY+M ++G D KRIS      Y  PVWSP+GDLI
Sbjct: 308 AIDTSPSFSPDGSQIVFNSDRGGSPQLYIMSASGGDAKRISY-GHGQYGSPVWSPRGDLI 366

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---- 417
           AF++ +   F++GVM  DG+ ER+L +   +++P + P+GR L F R+    +G      
Sbjct: 367 AFSRIANGSFSLGVMAPDGTGERILTQGFTVESPAFCPNGRVLAFCRQSAAGSGGAGFAT 426

Query: 418 -LYSIDLNGRNETLINTPAYASDPQWVGF 445
            + +ID+ G +E  +     ASDP W   
Sbjct: 427 GISTIDITGFHERALP-AGSASDPTWSPL 454


>gi|294341055|emb|CAZ89450.1| putative Protein tolB precursor [Thiomonas sp. 3As]
          Length = 438

 Score =  358 bits (920), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 113/445 (25%), Positives = 203/445 (45%), Gaps = 13/445 (2%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M  R F+   L+  +       +       S  A  KV  +    + + +    F  ++ 
Sbjct: 1   MQRRRFVLGSLSAPLVRGAASFVGLATLANSAQAQFKVDVSGIGATQIPVGIGAFRDLNH 60

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
               ++++V  DL RS +F +    +   +       P +  W S   + +  G V +  
Sbjct: 61  CPQPIADIVRADLTRSGLFAV---SNLGGQTLTEQGPPNYAAWRSQNLEAVAGGSVAQVT 117

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
             R +V+FRLWD   +  + G      P   R  AH ISD IYQ +TG++G F +RI ++
Sbjct: 118 GGRWQVQFRLWDAVKQADLGGLALTVMPGDLRLAAHKISDYIYQKLTGQRGVFATRITYI 177

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++   +G    SL + D DGAN ++   SR+  L  P +SPN Q++AY +++    + V+
Sbjct: 178 TK---AGQHNFSLNIADSDGANPQFALRSREP-LLSPVWSPNGQELAYVSFETGKPV-VF 232

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D R   A + + NF+    AP FS +G    + +       IY +  +     +L  +
Sbjct: 233 MQDVRSG-ARRAVANFKGSNSAPAFSPDGGTLAVVLTLTGRSQIYLMPSKGGTPRQLMRS 291

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+   ++SPD   + F SDR+G  Q+Y +  NG   +RI+     +   P  SP G  
Sbjct: 292 YSIDTEPTFSPDGQSLYFVSDRDGGPQVYKVGLNGGSVQRITYSGGYNV-SPAISPDGKT 350

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +A+    G  + +  +    +  +LL + S+   P+++P+G+ +++S    G  G  L +
Sbjct: 351 LAYISQQGNSYQLWSINLATNATQLLDDGSDCGHPSFAPNGQIVLYSA--GGRGGEVLKT 408

Query: 421 IDLNGR-NETLINTPAYASDPQWVG 444
           + ++GR   TL        +P W  
Sbjct: 409 VSIDGRVRSTLSQAGVQVREPSWGP 433


>gi|262375578|ref|ZP_06068811.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           lwoffii SH145]
 gi|262309832|gb|EEY90962.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           lwoffii SH145]
          Length = 427

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 110/436 (25%), Positives = 199/436 (45%), Gaps = 16/436 (3%)

Query: 12  NMKINLCLLLVL-IGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
             K  LCL ++  +G    T   A + +    A  +   IA   F         +  VV 
Sbjct: 4   TRKHLLCLAIMTTLGAVTATQSQAQLHLEITKAPEAAPKIAIVPFSQD----QSIYPVVE 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL RS  F   S++      T   + P  + W + G   +VTG           ++++L
Sbjct: 60  NDLNRSGKFASASKNL---PATAQLNSPNAEAWAAAGVPYVVTGSSKTNPDGSYSIQYQL 116

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +DV+ R+ ++ +      +  R+ AH ISD IYQ++TG  GDF  RI +V  +  +   +
Sbjct: 117 YDVEKRQYLLNELLTVPASRTRQAAHMISDAIYQALTGIPGDFTGRIAYVLRNPATPERR 176

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L + D DG   + +  SRD I   P ++P+ +K+AY +++ +    +Y+ D    +  
Sbjct: 177 YTLQIADTDGEQPKTILTSRDPI-LSPAWTPDAKKIAYVSFETKRPA-IYVQDLATGQ-R 233

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +++ +FR +  AP FS +GK  L +       +IY ++L++   +R+TN   I+  A Y+
Sbjct: 234 EKLASFRGLNGAPSFSPDGKSMLFTASMHGNPEIYQMNLETRQLKRMTNDSAIDTEARYA 293

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGE 369
           PD    +F SDR G  Q+Y    N    KR++     +      S  G  +A     SG 
Sbjct: 294 PDGKSFIFTSDRGGSPQIYRYDFNNESTKRLTFRGAFNARA-TLSADGKKLALVHRPSGS 352

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE- 428
            + + V         +L   S  ++P++SP+G+ ++++ ++       +  + L+GR   
Sbjct: 353 NYKVAVQDISSGVTNILTPTSLDESPSFSPNGQMVVYATREGNRGLLSI--MSLDGRFRM 410

Query: 429 TLINTPAYASDPQWVG 444
            L +      +P W  
Sbjct: 411 NLPSETGEVREPAWAP 426


>gi|296136886|ref|YP_003644128.1| Tol-Pal system beta propeller repeat protein TolB [Thiomonas
           intermedia K12]
 gi|295797008|gb|ADG31798.1| Tol-Pal system beta propeller repeat protein TolB [Thiomonas
           intermedia K12]
          Length = 438

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 113/445 (25%), Positives = 203/445 (45%), Gaps = 13/445 (2%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M  R F+   L+  +       +       S  A  KV  +    + + +    F  ++ 
Sbjct: 1   MQRRRFVLGSLSAPLVRGAASFVGLTALANSAQAQFKVDVSGIGATQIPVGIGAFRDLNH 60

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
               ++++V  DL RS +F +    +   +       P +  W S   + +  G V +  
Sbjct: 61  CPQPIADIVRADLTRSGLFAV---SNLGGQTLTEQGPPNYAAWRSQNLEAVAGGSVAQVT 117

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
             R +V+FRLWD   +  + G      P   R  AH ISD IYQ +TG++G F +RI ++
Sbjct: 118 GGRWQVQFRLWDAVKQADLGGLALTVMPGDLRLAAHKISDYIYQKLTGQRGVFATRITYI 177

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++   +G    SL + D DGAN ++   SR+  L  P +SPN Q++AY +++    + V+
Sbjct: 178 TK---AGQHNFSLNIADSDGANPQFALRSREP-LLSPVWSPNGQELAYVSFETGKPV-VF 232

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D R   A + + NF+    AP FS +G    + +       IY +  +     +L  +
Sbjct: 233 MQDVRSG-ARRAVANFKGSNSAPAFSPDGGTLAVVLTLTGRSQIYLMPSKGGTPRQLMRS 291

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+   ++SPD   + F SDR+G  Q+Y +  NG   +RI+     +   P  SP G  
Sbjct: 292 YSIDTEPTFSPDGQSLYFVSDRDGGPQVYKVGLNGGSVQRITYSGGYNV-SPAISPDGKT 350

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +A+    G  + +  +    +  +LL + S+   P+++P+G+ +++S    G  G  L +
Sbjct: 351 LAYISQQGNSYQLWSINLATNATQLLDDGSDCGHPSFAPNGQIVLYSA--GGRGGEVLKT 408

Query: 421 IDLNGR-NETLINTPAYASDPQWVG 444
           + ++GR   TL        +P W  
Sbjct: 409 VSIDGRVRSTLSQAGVQVREPSWGP 433


>gi|10120890|pdb|1CRZ|A Chain A, Crystal Structure Of The E. Coli Tolb Protein
          Length = 403

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 92/411 (22%), Positives = 180/411 (43%), Gaps = 11/411 (2%)

Query: 39  ATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP 98
            +   +  P+ +   ++         +  +V+ DL+ S  FN + +    Q+  +   + 
Sbjct: 1   DSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEV- 59

Query: 99  RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAH 156
           +   W++LG   +V G+V         V ++L D        +    +  +    R   H
Sbjct: 60  QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGH 119

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           T SD++++ +TG KG F +RI +V ++   G     L V D DG N +++     Q L  
Sbjct: 120 TASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLXS 177

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +SP+  K+AY T++        ++ T  + A +++ +F     AP FS +G +   ++
Sbjct: 178 PAWSPDGSKLAYVTFESGR--SALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFAL 235

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            K  ++++Y  DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y +  NG 
Sbjct: 236 SKTGSLNLYVXDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGG 295

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             +RI+ +   +  D   S  G        +G +  I          ++L      + P+
Sbjct: 296 APQRITWEGSQNQ-DADVSSDGKFXVXVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPS 354

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +P+G  +I+S  +   +   L  +  +GR +  L  T      P W  ++
Sbjct: 355 LAPNGTXVIYSSSQGXGSVLNL--VSTDGRFKARLPATDGQVKFPAWSPYL 403


>gi|118574577|sp|Q478F2|TOLB_DECAR RecName: Full=Protein tolB; Flags: Precursor
          Length = 426

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 100/412 (24%), Positives = 190/412 (46%), Gaps = 14/412 (3%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
            + +    A  + + +    F         V+  V  DL+RS +F L+   +      + 
Sbjct: 26  QLSIEITGAGANRIPVTIVDFPGDPTAARVVTATVRADLERSGLFKLVDNGTA---AFDE 82

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
           ++     +W   GA  L  G + +    R+   FRL+D +    + G  + ++ +  R  
Sbjct: 83  NAPVNHAEWKGKGADALAAGSIARSTDGRMEARFRLYDTQKGVSLGGAAYVTNNSQLRAA 142

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            H I+D IY+ +TGEKG F++RI +V    V    +  L + D DG N      S + I+
Sbjct: 143 GHRIADFIYEKLTGEKGVFSTRIAYV----VKARGQFLLQIADSDGQNAATALSSTEPII 198

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+  ++AY +++ +    V  + T        + NF+    AP +S +G++  +
Sbjct: 199 -SPVWSPDGGRLAYVSFEKKKP--VIYVHTLASGQRHIVANFKGSNSAPAWSPDGRKLAV 255

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + KD    IYSV+   +  +R+T +  I+    YS D   I F SDR G  Q+Y + ++
Sbjct: 256 VLSKDGNSQIYSVNADGSGLQRITQSSGIDTEPRYSADGGTIYFTSDRGGSPQVYQVGAS 315

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G D KR++ +   +   P  +P G  +AF      +F + VM     Q +++ + +  ++
Sbjct: 316 GGDAKRVTFEGSYNV-SPRPAPDGKSLAFISRREGRFQLAVMDLASRQVQVVSDSNKDES 374

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
           P+++P+ R ++ + +  G     L ++  +GR  + L        +P W  +
Sbjct: 375 PSFAPNSRMILIATEIGGRG--VLSAVSSDGRIKQRLSVAAGDVREPAWGPY 424


>gi|262368607|ref|ZP_06061936.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           johnsonii SH046]
 gi|262316285|gb|EEY97323.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           johnsonii SH046]
          Length = 427

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 201/439 (45%), Gaps = 18/439 (4%)

Query: 11  LNMKINLCLLLVLIGGFFP---TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
           + M     L L ++  F P   T  HA + +    A      IA   F +   L      
Sbjct: 1   MEMTRKHLLSLAILTAFSPVLVTQAHAQLHLEIAKAPEEAPKIAIVPFSNDSSL----YP 56

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           ++  DL RS  F   S++      T   + P   +W + G   +VTG V         V 
Sbjct: 57  IIETDLNRSGKFTSASKNL---PATASMNNPNAANWQAAGVPYVVTGTVKTTENGSYEVH 113

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           ++L+DV+ ++ ++ +      +  R  AH ISD IYQ++TG  GDF+ RI +V  +  + 
Sbjct: 114 YQLYDVQKQQYLLNELLTVPASRVRSAAHMISDAIYQALTGIPGDFSGRIAYVLRNPATP 173

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             + +L + D DG   R +  SRD I   P ++P+ +K+AY +++ +    +Y+ D    
Sbjct: 174 EQRYTLQIADTDGEQPRTILTSRDPI-LSPAWTPDAKKIAYVSFETKRPA-IYVQDLSTG 231

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A +++ +FR +  AP FS +GK  L +       +IY ++L++   +R+TN   I+  A
Sbjct: 232 -AREKLASFRGLNGAPSFSPDGKSMLFTASMHGNPEIYQMNLETRQLQRMTNDSAIDTEA 290

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
            Y+PD    +F SDR G  Q+Y      S   R++    A       S  G  +A     
Sbjct: 291 RYAPDGKSFIFTSDRGGSAQIYRYDLANSSYNRLTFRG-AFNARGTLSADGKKLALVHRP 349

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           SG  + + +   + S   +L   S  ++P++SP+G+ ++++ ++       +  + L+GR
Sbjct: 350 SGSNYKVAIQDLNSSVTNILTPTSLDESPSFSPNGQMVVYATREGSRGLLSI--MSLDGR 407

Query: 427 NE-TLINTPAYASDPQWVG 444
               L +      +P W  
Sbjct: 408 FRMNLPSEQGEVREPAWAP 426


>gi|222474900|ref|YP_002563315.1| TOLB protein precursor (tolB) [Anaplasma marginale str. Florida]
 gi|255002872|ref|ZP_05277836.1| translocation protein TolB [Anaplasma marginale str. Puerto Rico]
 gi|222419036|gb|ACM49059.1| TOLB protein precursor (tolB) [Anaplasma marginale str. Florida]
          Length = 441

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 164/453 (36%), Positives = 248/453 (54%), Gaps = 22/453 (4%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
              FF A  L   I+L  LL   G        A + V     N   V I+     S   L
Sbjct: 1   MRIFFFAYVLPTVISL--LLGCQGAV------AALGVDITKGNTEKVKISVAPMHSSTNL 52

Query: 62  GGKVS----EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
             ++      V+ +DL  + +F+   +       T  + +P    W S+   VLVTG + 
Sbjct: 53  EKEIGKSCIRVMLRDLNSTGIFDASWKLPAGGFGTTSEGMPDSNAWTSVAKDVLVTGSIK 112

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
           +  + R++V+  +WDV   +Q+ GK F  +  +WR+ AH++SD IY  ITGE G FN+RI
Sbjct: 113 EFAQGRVKVKLFIWDVASGRQLSGKSFNFATGNWRRAAHSMSDSIYSRITGEGGYFNTRI 172

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +V+E+ + G  +  + +MD+DGAN  Y+T  R + +  PRFSP+ + + Y +Y  +   
Sbjct: 173 AYVAETGLPGSRR--IAIMDQDGANNIYIT-GRGEFVSTPRFSPDARNLVYMSY-AKSGG 228

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V L D         +G  R +  +PRFS +G+  L+S     + +IYS+DL+S  + RL
Sbjct: 229 SVVLHDLETG-YSTALGGVRGVNSSPRFSPDGRHVLLSESAQGSTNIYSIDLKSGKSTRL 287

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN   IN SASYSPD   IVF SDR G+ QLYVM ++G++Q+RIS  K   Y  P WSP+
Sbjct: 288 TNDRSINTSASYSPDKKSIVFNSDRSGRPQLYVMNADGTNQRRISSGK-GGYSAPAWSPR 346

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-- 415
           GD IAFTK  G+ F +GVMK DGS ERLL +   + +P+WSP+GR ++F+++        
Sbjct: 347 GDWIAFTKTEGKSFHVGVMKPDGSGERLLAKGYMVDSPSWSPNGRVILFTQQDPPSATHP 406

Query: 416 --SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
             S+L ++D+ G N  +++ P  AS+  W   +
Sbjct: 407 FRSRLVTVDITGTNTQILDVPTNASNAHWSPVL 439


>gi|209364240|ref|YP_001425326.2| TolB [Coxiella burnetii Dugway 5J108-111]
 gi|212213381|ref|YP_002304317.1| TolB [Coxiella burnetii CbuG_Q212]
 gi|215918884|ref|NP_819142.2| TolB [Coxiella burnetii RSA 493]
 gi|206583769|gb|AAO89656.2| TolB [Coxiella burnetii RSA 493]
 gi|207082173|gb|ABS77388.2| TolB [Coxiella burnetii Dugway 5J108-111]
 gi|212011791|gb|ACJ19172.1| TolB [Coxiella burnetii CbuG_Q212]
          Length = 440

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 183/426 (42%), Gaps = 14/426 (3%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG---GKVSEVVSKDLQRSDVFNLISQ 84
           F    +  + +       + + IA   F     L      + +V+  DLQ S  F +   
Sbjct: 20  FVPVSYGALDLELTKGVTAAIPIAIMPFAGPSVLAPGDETIPQVIKNDLQNSGQFRVTGS 79

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK-DRKQIIGKK 143
            +  Q   + + I  +  W       LV G +   G  R RV F L +V     +++ + 
Sbjct: 80  GNLDQTAASLEQI-DYSYWRKQKVNALVVGAINPLGMRRYRVAFTLINVFDSNNRLLSES 138

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGA 201
           F  +    R +AH ISD IYQ +TG +G F+++I +V    S  +   K +L V D DG 
Sbjct: 139 FNVNAKELRNLAHHISDLIYQKLTGVRGVFSTKIAYVLVQASSENTAAKYTLEVADADGF 198

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N + L  S D  +  P +SP+  K+AY +++      +YL D    R  +R+     +  
Sbjct: 199 NPQPLLVS-DMPIMSPTWSPDGNKIAYVSFE-GHRAAIYLQDLATGR-RQRLSEAPGING 255

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +GK+  + + K     IY ++L       +T    I+   ++SPD   ++F S+
Sbjct: 256 APAFSPDGKQLALVLTKTGNPKIYILNLADGHLREITKGWSIDTEPAWSPDGKSLLFTSN 315

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R+G  Q+Y          R++   + +   P + P G  I         F I        
Sbjct: 316 RDGTPQIYNYSFADGSINRVTYRGDYNAR-PSFMPDGKSIIMMHRENGLFGIARQDLSTG 374

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDP 440
           Q ++L E    ++P+ +P+G+  I++ +  G     L  + ++G+ +  L        +P
Sbjct: 375 QVQILSESGTDESPSLAPNGKMAIYAMEYGGRG--VLAQVSIDGQIKLRLPARNGNVQEP 432

Query: 441 QWVGFM 446
            W  ++
Sbjct: 433 AWSPYL 438


>gi|161831311|ref|YP_001596058.1| TolB protein [Coxiella burnetii RSA 331]
 gi|32699692|sp|Q83F59|TOLB_COXBU RecName: Full=Protein tolB; Flags: Precursor
 gi|161763178|gb|ABX78820.1| TolB protein [Coxiella burnetii RSA 331]
          Length = 437

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 183/426 (42%), Gaps = 14/426 (3%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG---GKVSEVVSKDLQRSDVFNLISQ 84
           F    +  + +       + + IA   F     L      + +V+  DLQ S  F +   
Sbjct: 17  FVPVSYGALDLELTKGVTAAIPIAIMPFAGPSVLAPGDETIPQVIKNDLQNSGQFRVTGS 76

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK-DRKQIIGKK 143
            +  Q   + + I  +  W       LV G +   G  R RV F L +V     +++ + 
Sbjct: 77  GNLDQTAASLEQI-DYSYWRKQKVNALVVGAINPLGMRRYRVAFTLINVFDSNNRLLSES 135

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGA 201
           F  +    R +AH ISD IYQ +TG +G F+++I +V    S  +   K +L V D DG 
Sbjct: 136 FNVNAKELRNLAHHISDLIYQKLTGVRGVFSTKIAYVLVQASSENTAAKYTLEVADADGF 195

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N + L  S D  +  P +SP+  K+AY +++      +YL D    R  +R+     +  
Sbjct: 196 NPQPLLVS-DMPIMSPTWSPDGNKIAYVSFE-GHRAAIYLQDLATGR-RQRLSEAPGING 252

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +GK+  + + K     IY ++L       +T    I+   ++SPD   ++F S+
Sbjct: 253 APAFSPDGKQLALVLTKTGNPKIYILNLADGHLREITKGWSIDTEPAWSPDGKSLLFTSN 312

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R+G  Q+Y          R++   + +   P + P G  I         F I        
Sbjct: 313 RDGTPQIYNYSFADGSINRVTYRGDYNAR-PSFMPDGKSIIMMHRENGLFGIARQDLSTG 371

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDP 440
           Q ++L E    ++P+ +P+G+  I++ +  G     L  + ++G+ +  L        +P
Sbjct: 372 QVQILSESGTDESPSLAPNGKMAIYAMEYGGRG--VLAQVSIDGQIKLRLPARNGNVQEP 429

Query: 441 QWVGFM 446
            W  ++
Sbjct: 430 AWSPYL 435


>gi|302879781|ref|YP_003848345.1| Tol-Pal system beta propeller repeat protein TolB [Gallionella
           capsiferriformans ES-2]
 gi|302582570|gb|ADL56581.1| Tol-Pal system beta propeller repeat protein TolB [Gallionella
           capsiferriformans ES-2]
          Length = 422

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 104/416 (25%), Positives = 188/416 (45%), Gaps = 14/416 (3%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
             A + +    A    + ++        +L  +++EVVS DL R+ +F L+       K 
Sbjct: 20  ASAALNIEIIGAGEHQIPVSLVPMGGDAKLAQEINEVVSGDLLRTGLFRLVDTTG---KA 76

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
            +  +   + DW   GA+ L  G V  +   R+   FRL DV    +++G+         
Sbjct: 77  PHEPAEVNYTDWQLRGAEALAIGTVSLQASGRIEARFRLLDVLKHVELVGQAVSVGNGQV 136

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R + H I+D IY+ +TG  G F++RI +V+    S      L V D DG N + +    +
Sbjct: 137 RAVGHRIADLIYEKLTGNPGVFSTRIAYVNRQGRS----FRLIVADSDGYNEQIVLKQNE 192

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I   P +SP+   +AY +++         + +      K + ++R    AP +S +G++
Sbjct: 193 PI-MSPSWSPDGSHLAYVSFETGHA--AVFVQSLYTNLRKVVADYRGSNSAPAWSPDGRQ 249

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             + + +D    IY +    +   R++ +  I+   ++SPD   ++F SDR G  Q+Y M
Sbjct: 250 LAVVLTRDGGSQIYLMRPDGSELRRISFSGGIDTEPNFSPDGLSLLFTSDRGGSAQVYRM 309

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              G   +R++     S F P +SP G    FT  SG +F I V      Q   L E   
Sbjct: 310 PVEGGGAQRMTFAS-GSCFSPRYSPDGKSFVFTHLSGGRFYISVQDFQTGQAEALTEGGW 368

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGFM 446
            + P+++P+G+ ++F+ +  G     L ++  +GR  + +      A +P W   +
Sbjct: 369 EKKPSYAPNGKLILFASEARGRGI--LATVSSDGRVKQHMFTQSGDAREPVWGPNL 422


>gi|315634713|ref|ZP_07889997.1| tol-Pal system beta propeller repeat protein TolB [Aggregatibacter
           segnis ATCC 33393]
 gi|315476661|gb|EFU67409.1| tol-Pal system beta propeller repeat protein TolB [Aggregatibacter
           segnis ATCC 33393]
          Length = 426

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 99/441 (22%), Positives = 187/441 (42%), Gaps = 22/441 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEV 68
           +   I +  L +++ G       A V++  +    +  P+++   K+         ++++
Sbjct: 1   MKRVIRVFSLFIMLLGLTSL-ARAEVRIVIDEVMDSARPIAVVPFKWNGPGSAPADIADI 59

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           ++ DL+ S  FN +S     Q+ T    +     W++LG + ++ G+V         + +
Sbjct: 60  IASDLRNSGKFNPLSVSKMPQQPTTAAEV-NPSAWSALGIEAVIVGQVTP-SNGGFDIAY 117

Query: 129 RLWDV--KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D        +   ++  +    R  AHT+SD+ ++ +TG +G F +RI +V +    
Sbjct: 118 QLVDTMGSAGSILSQNQYTVTQKWVRYGAHTVSDETFEKLTGIRGAFRTRIAYVVQKN-G 176

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     + V D DG N +++     Q    P +SP+ +K+AY +++++    +  +    
Sbjct: 177 GSQPYEVRVADYDGFN-QFIINKSSQPFMSPAWSPDGKKLAYVSFENKKAQII--LQDLS 233

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             A K I +F     AP FS +G R   +  KD  ++IY ++L S    +LT+    N  
Sbjct: 234 SMARKVIASFPGHNGAPAFSPDGSRLAFASSKDGVLNIYVINLGSGQVSQLTSGSGNNTE 293

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD   IVF SDR G  Q+Y M ++G     +             S  G  +     
Sbjct: 294 PSWSPDGQSIVFTSDRGGSPQVYRMSASGGGASLV-----GGRGSGQISSDGSTLVMI-- 346

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 I           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR
Sbjct: 347 -DGSNNIVKQDLVSGGSEVLSSTFLDESPSISPNGIMIIYSSTQG--LGKVLQLVSTDGR 403

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L         P W  ++
Sbjct: 404 FKARLPGNDGQVKFPAWSPYL 424


>gi|56416532|ref|YP_153606.1| translocation protein TolB [Anaplasma marginale str. St. Maries]
 gi|254994752|ref|ZP_05276942.1| translocation protein TolB [Anaplasma marginale str. Mississippi]
 gi|255004004|ref|ZP_05278805.1| translocation protein TolB [Anaplasma marginale str. Virginia]
 gi|67461908|sp|Q5PBH8|TOLB_ANAMM RecName: Full=Protein tolB; Flags: Precursor
 gi|56387764|gb|AAV86351.1| TolB protein precursor [Anaplasma marginale str. St. Maries]
          Length = 441

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 157/445 (35%), Positives = 244/445 (54%), Gaps = 15/445 (3%)

Query: 11  LNMKINLCLLLVLIGGFFPTS-IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS--- 66
           + +     +L  +I          A + V     N   V I+     S   L  ++    
Sbjct: 1   MRIFFFAYVLPTVISLLLGCQGAIAALGVDITKGNTEKVKISVAPMHSSTNLEKEIGKSC 60

Query: 67  -EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
             V+ +DL  + +F+   +       T  + +P    W S+   VLVTG + +  + R++
Sbjct: 61  IRVMLRDLNSTGIFDASWKLPAGGFSTTSEGMPDSNAWTSVAKDVLVTGSIKEFAQGRVK 120

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           V+  +WDV   +Q+ GK F  +  +WR+ AH++SD IY  ITGE G FN+RI +V+E+ +
Sbjct: 121 VKLFIWDVASGRQLSGKSFNFATGNWRRAAHSMSDSIYSRITGEGGYFNTRIAYVAETGL 180

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G  +  + +MD+DGAN  Y+T  R + +  PRFSP+ + + Y +Y  +    V L D  
Sbjct: 181 PGSRR--IAIMDQDGANNIYIT-GRGEFVSTPRFSPDARNLVYMSY-AKSGGSVVLHDLE 236

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +G  R +  +PRFS +G+  L+S     + +IYS+DL+S  + RLTN   IN 
Sbjct: 237 TG-YSTALGGVRGVNSSPRFSPDGRHVLLSESAQGSTNIYSIDLKSGKSTRLTNDRSINT 295

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           SASYSPD   IVF SDR G+ QLYVM ++G++Q+RIS  K   Y  P WSP+GD IAFTK
Sbjct: 296 SASYSPDKKSIVFNSDRSGRPQLYVMNADGTNQRRISSGK-GGYSAPAWSPRGDWIAFTK 354

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG----SKLYSI 421
             G+ F +GVMK DGS ERLL +   + +P+WSP+GR ++F+++          S+L ++
Sbjct: 355 TEGKSFHVGVMKPDGSGERLLAKGYMVDSPSWSPNGRVILFTQQDPPSATHPFRSRLVTV 414

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D+ G N  +++ P  AS+  W   +
Sbjct: 415 DITGTNTQILDVPTNASNAHWSPVL 439


>gi|224826140|ref|ZP_03699243.1| Tol-Pal system beta propeller repeat protein TolB [Lutiella
           nitroferrum 2002]
 gi|224601777|gb|EEG07957.1| Tol-Pal system beta propeller repeat protein TolB [Lutiella
           nitroferrum 2002]
          Length = 428

 Score =  357 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 110/412 (26%), Positives = 200/412 (48%), Gaps = 14/412 (3%)

Query: 36  VKVATNSANYSPVSIAFTKFVSID-ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
           + +       +  +IA   F +   ++   ++ ++  DL  +  F ++   S       P
Sbjct: 26  MTIEIVGGGANRHAIAVLPFQNETTQVREALTPIIRNDLLLTGAFRMVDPASAANPAFEP 85

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
             I  +  W   GAQ L  G+V   G  ++++ FRL+D   +KQ+   +F  +P   R++
Sbjct: 86  AQI-NYPAWRGAGAQSLAIGKVEAAG-GQVKISFRLFDAAQQKQLTSGEFTVTPERSREV 143

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AHTI+D IY++ITG+KG FN+RI +V +S         L V D DG   + +  S++ I+
Sbjct: 144 AHTIADMIYEAITGQKGIFNTRISYVLKSG----RDYLLQVADMDGRGAQTILRSKEPII 199

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+  K+AY +++ +    V  +   +    + + NF+    AP +S +G++  +
Sbjct: 200 -SPAWSPDGGKIAYVSFEAKKP--VVWVQNLVTGQRRIVANFKGSNSAPAWSPDGRQLAV 256

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +       IY +D       R+T++  I+   ++SPD SQ+ F SDR G  Q+YV    
Sbjct: 257 VLTTSGTSQIYVIDANGGGARRVTHSNAIDTEPAWSPDGSQLYFVSDRAGGPQIYVQPVA 316

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G   +R+S D   +   P  SP G  +++ +  G +F + V        R+L   +  + 
Sbjct: 317 GGSARRLSWDGSYNV-SPKVSPDGRTLSYIRRQGGQFRVVVQDLASGDNRVLSSGAYNER 375

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGF 445
           P+++P+ R ++F+  + G   S LY+   +G ++  L        DP W  F
Sbjct: 376 PSFAPNSRMVLFASDEGGR--SVLYAATPDGSSKVRLAVINGDVQDPAWGPF 425


>gi|301155738|emb|CBW15206.1| periplasmic protein [Haemophilus parainfluenzae T3T1]
          Length = 427

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 95/440 (21%), Positives = 181/440 (41%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + L +V+            V++  +        IA   F         + ++V+ D
Sbjct: 4   IKRVMGLFVVMFAFASTAMAEDEVRIVIDEGVDGARPIAVVPFAG--SAPENIGQIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I      Q+ T    + + + W +LG   +V G+V   G     + ++L D
Sbjct: 62  LRNSGKFNPIPVSQMPQQPTTAAEV-KPEAWTALGIDAVVVGQVTSTGSG-YNISYQLVD 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      +    +  +    R  AHT+SD++++ +TG +G F +RI +V +    G
Sbjct: 120 TVGASGTPGAVLAQNSYTVTNKWLRYGAHTVSDEVFEKLTGIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ +++AY +++++    V  +     
Sbjct: 179 SQPYEVRVADYDGYN-QFIVNRSSQPIMSPAWSPDGKRLAYVSFENKKSQLV--VQDLGS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            + K + +F     AP FS +G +   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GSRKVVASFPGHNGAPAFSPDGSKLAFASSQDGLLNIYVMSSNGGKPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SPD S I+F SDR G  Q+Y M ++G     +             S  G  +      
Sbjct: 296 SWSPDGSSILFTSDRSGSPQVYRMSASGGGASPV-----GGRGSAQISSDGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTTGSSEVLSTSFLGESPSISPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSNGQVKFPAWSPYL 425


>gi|52424778|ref|YP_087915.1| translocation protein TolB [Mannheimia succiniciproducens MBEL55E]
 gi|67461939|sp|Q65UN0|TOLB_MANSM RecName: Full=Protein tolB; Flags: Precursor
 gi|52306830|gb|AAU37330.1| TolB protein [Mannheimia succiniciproducens MBEL55E]
          Length = 431

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 102/441 (23%), Positives = 181/441 (41%), Gaps = 22/441 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +   L    VL            V++  +        IA   F +   +   ++E+V+ D
Sbjct: 5   LTRMLSAFAVLFFAISTAQADDEVRIVIDEGVDGARPIAVVPFKTNGSVPADIAEIVTAD 64

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I      Q+  +   +     W +LG   +V G+V   G     + ++L D
Sbjct: 65  LRNSGKFNPIPVSQMPQQPASASEV-TPDAWAALGVDAIVVGQVTATGNG-YNIAYQLVD 122

Query: 133 VKDR----KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                     ++ +   +  A W R  AHT+SD++++ +T  KG F +RI +V +    G
Sbjct: 123 TVGASGGAGAVLAQNSVTVGAKWIRYGAHTVSDEVFEKLTAIKGAFRTRIAYVVQKN-GG 181

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ +++AY ++++     V  +     
Sbjct: 182 SKPYEIRVADYDGFN-QFIVNRSSQPIMSPAWSPDGKRLAYVSFENRKSQLV--VQDLGS 238

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A K + +F+    AP FS +G R   +  K+  ++IY +        +LT+    N   
Sbjct: 239 GARKVVASFQGHNGAPAFSPDGSRLAFASNKEGQLNIYVMGANGGQPTQLTSGSGNNTEP 298

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SPD S I+F SDR G  Q+Y M S+G     +             S  G  +      
Sbjct: 299 SWSPDGSSILFTSDRGGSPQVYRMSSSGGAASPV-----GGRGSAQISSDGKTLVMI--- 350

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 351 NGNNNVVKQDVTSGASEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 408

Query: 428 E-TLINTPAYASDPQWVGFMD 447
           +  L  T      P W  ++D
Sbjct: 409 KARLPGTDGQVKFPAWSPYLD 429


>gi|165918421|ref|ZP_02218507.1| TolB protein [Coxiella burnetii RSA 334]
 gi|165917927|gb|EDR36531.1| TolB protein [Coxiella burnetii RSA 334]
          Length = 437

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 181/426 (42%), Gaps = 14/426 (3%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG---GKVSEVVSKDLQRSDVFNLISQ 84
           F    +  + +       + + IA   F     L      + +V+  DLQ S  F +   
Sbjct: 17  FVPVSYGALDLELTKGVTAAIPIAIMPFAGPSVLAPGDETIPQVIKNDLQNSGQFRVTGS 76

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK-DRKQIIGKK 143
            +  Q   + + I  +  W       LV G +   G  R RV F L +V     +++ + 
Sbjct: 77  GNLDQTAASLEQI-DYSYWRKQKVNALVVGAINPLGMRRYRVAFTLINVFDSNNRLLSES 135

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGA 201
           F       R  AH ISD IYQ +TG +G F+++I +V    S  +   K +L V D DG 
Sbjct: 136 FNVDAKELRNFAHHISDLIYQKLTGVRGVFSTKIAYVLVQASSENTAAKYTLEVADADGF 195

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N + L  S D  +  P +SP+  K+AY +++      +YL D    R  +R+     +  
Sbjct: 196 NPQPLLVS-DMPIMSPTWSPDGNKIAYVSFE-GHRAAIYLQDLATGR-RQRLSEAPGING 252

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS +GK+  + + K     IY ++L       +T    I+   ++SPD   ++F S+
Sbjct: 253 APAFSPDGKQLALVLTKTGNPKIYILNLADGHLREITKGWSIDTEPAWSPDGKSLLFTSN 312

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R+G  Q+Y          R++   + +   P + P G  I         F I        
Sbjct: 313 RDGTPQIYNYSFADGSINRVTYRGDYNAR-PSFMPDGKSIIMMHRENGLFGIARQDLSTG 371

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDP 440
           Q ++L E    ++P+ +P+G+  I++ +  G     L  + ++G+ +  L        +P
Sbjct: 372 QVQILSESGTDESPSLAPNGKMAIYAMEYGGRG--VLAQVSIDGQIKLRLPARNGNVQEP 429

Query: 441 QWVGFM 446
            W  ++
Sbjct: 430 AWSPYL 435


>gi|254516703|ref|ZP_05128762.1| Tol-Pal system beta propeller repeat protein TolB [gamma
           proteobacterium NOR5-3]
 gi|219675126|gb|EED31493.1| Tol-Pal system beta propeller repeat protein TolB [gamma
           proteobacterium NOR5-3]
          Length = 428

 Score =  355 bits (911), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 91/412 (22%), Positives = 184/412 (44%), Gaps = 10/412 (2%)

Query: 38  VATNSANYSPVSIAFTKFV--SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           +        P  +A   F           +++VV +D +RS  F+ +++       +  +
Sbjct: 22  IEITQGVDDPTPVAVVPFAWEGAGNAPVDMAQVVQEDFERSGQFSPVNRADMLGFPSREE 81

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
            +  ++DW ++ ++ ++ GR   EG D+L + + L+DV  + +I            R +A
Sbjct: 82  EV-FYRDWRAIASEYVLIGRASGEG-DQLSLRYELYDVLRQARIAEGSVAGPAGEARMLA 139

Query: 156 HTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           H +SD +Y+ +TG  G F +R+++VS     +G     L + D DGA    L  SR+ I 
Sbjct: 140 HRVSDAVYEKLTGIPGAFATRLIYVSVTRNPTGKDYYRLTLADSDGARPIVLLESREPI- 198

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P ++P+ ++VAY +++                  +++ NFR +  +P +S +G    +
Sbjct: 199 MSPSWAPDGKQVAYVSFETGRP--AIFRQVLATGEREQLTNFRGLNSSPAWSPDGNSMAM 256

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + KD + DIY +D+ +    R+T+   I+   S+ PD    +F SDR G+ Q+Y     
Sbjct: 257 VLSKDGSPDIYLMDMATRRLTRVTSHYAIDTEPSWMPDGRSFLFTSDRGGRPQIYRYDLR 316

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
               +R++ +   +    V +  G  +        +F I +     ++ ++L      ++
Sbjct: 317 SGLTERVTFEGNYNARARV-AQDGRNVVLVHQREGEFQIAIHDLVSNRLQVLTNTDLDES 375

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           P+ +P+G  ++++ K          S+D  G    L        +P W  +M
Sbjct: 376 PSIAPNGSMVLYATKFGDRGILSAVSVDG-GVKFRLPARNGDVREPAWSPYM 426


>gi|256823065|ref|YP_003147028.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Kangiella koreensis DSM 16069]
 gi|256796604|gb|ACV27260.1| Tol-Pal system beta propeller repeat protein TolB [Kangiella
           koreensis DSM 16069]
          Length = 454

 Score =  355 bits (911), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 97/454 (21%), Positives = 196/454 (43%), Gaps = 35/454 (7%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSAN--YSPVSIAFTKFVSI----DELGGKVSEVVSKDL 73
           L ++       +  A +++          P+++   KF S      +     +++++ DL
Sbjct: 8   LAIISISLMALASKAEIQIYITEGRSDARPIAVVPFKFESESAVQGQPPFDFAKIIADDL 67

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
           +RS  FN        Q   + D +   ++W  LG   +V G V +       V + L D 
Sbjct: 68  RRSGKFNPTEISKLPQHPYSIDQV-NLEEWRKLGVDGVVYGTVSQTASGNYMVSYDLIDP 126

Query: 134 KDRKQIIG--------------------KKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            + K I                      K       ++R  AH  +D+IY+++TGE+G F
Sbjct: 127 FNDKAIFSADIEDGSYPLIPSSSHLMVLKTKVVDNDNFRWGAHIAADEIYEALTGERGAF 186

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            ++I +V  +  +      L V D DG N + +  SR  I   P +SP+  +++Y T+++
Sbjct: 187 ATQIAYVEVNR-NDPRPYQLFVADSDGFNGKRIFASRSPI-MSPTWSPDSSQLSYVTFEN 244

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + + D    +  + + +++    AP +S +G + ++ + KD   ++Y ++L +  
Sbjct: 245 GRS-EIVIQDIASGQ-REIVASYKGFNSAPAWSPDGSKMVVVLSKDGNPELYLLELATKQ 302

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            +RLT    I+   S++PD   ++F SDR G+ Q+Y ++       R++ +   +     
Sbjct: 303 LQRLTRHYAIDTEPSWAPDGKSLIFTSDRGGRPQIYRIRLADKKVDRVTFEGIHNAGAE- 361

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           ++P G  I     +   + I        Q  +L + +  ++ + +P+G  +IFS    G 
Sbjct: 362 FTPDGKSIVMVHQANGSYHIAAQDLVTGQLTVLTKTTLDESLSIAPNGSMIIFSTVDGGQ 421

Query: 414 TGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
               L ++ ++GR +  L  T      P W  F+
Sbjct: 422 K--VLSAVSMDGRFKARLPATVGEVKAPAWSPFI 453


>gi|77920565|ref|YP_358380.1| TolB protein [Pelobacter carbinolicus DSM 2380]
 gi|119371048|sp|Q3A097|TOLB_PELCD RecName: Full=Protein tolB; Flags: Precursor
 gi|77546648|gb|ABA90210.1| TolB protein [Pelobacter carbinolicus DSM 2380]
          Length = 443

 Score =  355 bits (910), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 120/443 (27%), Positives = 208/443 (46%), Gaps = 24/443 (5%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIA-----FTKFVSIDELGGKVS 66
            M+  + LL+ L+     T++ A   V   +     +++A           +  +  ++ 
Sbjct: 13  TMRRFVTLLIALLC-LSATAVQAQ--VEIRAPGQQTIAVANTQLVPLSGTPLPAIAAELH 69

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNP---DSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           +V++ DL+ S +F  +   +F      P    S   F  W  LGA++L+ G    +G+ R
Sbjct: 70  DVMAADLELSGLFRQLDPAAFLDDARRPGLTSSRVDFNQWALLGAEILIKGGYQLQGE-R 128

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           L V+FRL+DV  R+ + G+++       R +AH  +D + +S+TG +G F+SRI ++   
Sbjct: 129 LLVDFRLYDVVHRRLLTGRRYAGLRRDVRTMAHKFADQVLKSVTGREGPFSSRIAYIDNR 188

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                    L +MD DGAN   LT  R  I+  P FSPN ++V Y +Y   +   +Y   
Sbjct: 189 TG----HKELYLMDTDGANALRLTDHRS-IVLNPDFSPNGREVIYTSYRRGNP-DLYRKQ 242

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +   R+   + + +A RF  +G+   ++       ++  +    +   RLT+   I
Sbjct: 243 LSTGQEA-RLAFKKGLNIAARFRPDGREIALTQSATGNPELMLLGTDGSRRRRLTSHWGI 301

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           ++  S+SP   ++ F SDR+G   ++VM   G    R++ + + +   P WSP G  IAF
Sbjct: 302 DVDPSWSPAGDRLAFVSDRQGNPHIFVMDLLGGQTARLTANGKYNAT-PAWSPDGKRIAF 360

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           T+     F I  ++ DG+ ER L     N + P WSP  R L++S  +DG  G  +Y + 
Sbjct: 361 TRLEKGVFDIYTVRPDGTDERRLTFGPGNKEHPRWSPDSRFLVYSSDQDGRKG--IYIMR 418

Query: 423 LNGRNETLIN-TPAYASDPQWVG 444
            +G     I+        P W G
Sbjct: 419 ADGTGIRRISAGGGQCQHPAWSG 441


>gi|170717585|ref|YP_001783488.1| translocation protein TolB [Haemophilus somnus 2336]
 gi|189035983|sp|B0UVJ6|TOLB_HAES2 RecName: Full=Protein tolB; Flags: Precursor
 gi|168825714|gb|ACA31085.1| Tol-Pal system beta propeller repeat TolB [Haemophilus somnus 2336]
          Length = 434

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 105/447 (23%), Positives = 197/447 (44%), Gaps = 25/447 (5%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSA--NYSPVSIAFTKFVSIDELGGKVS 66
           +     L  L +++   F  ++ A   V++  +    +  P++I   K+   D +   V+
Sbjct: 1   MKFSAYLTTLFIVLFSLFIQTVQAESEVRIVIDEGVDSARPIAIIPFKWNGSDSMPIDVA 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           +++S DL+ S  FN I+     QK T+   +     W+SLG   +V G+V    K    +
Sbjct: 61  DIISADLRNSGKFNPIAVSKMPQKPTSASEVIS-DVWSSLGIDAVVVGQVTPNEKG-YSI 118

Query: 127 EFRLWDV-----KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            ++L D         + +   ++     + R  AHTISD++++ +T  +G F ++I +V 
Sbjct: 119 AYQLVDTIGASGNSGEVLSQNQYAVPKNAIRLGAHTISDEVFEKLTAIRGAFRTKIAYVV 178

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +    G     + + D DG N +++  S  Q L  P +SP+  K+AY ++++     +  
Sbjct: 179 QKN-GGSKPYQVRIADYDGHN-QFIVYSSSQPLMSPAWSPDGSKLAYVSFENRKSQLI-- 234

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +      A + I  F     AP FS +G +   +  KD  ++IY ++L +    +LT+  
Sbjct: 235 VHDLQSGARRVIAAFPGHNGAPAFSPDGSKIAFASSKDGVLNIYVMNLGNGTISQLTSGA 294

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             N   S+SPD   I+F SDR G  Q+Y M   G+    +S  +  S      S  G ++
Sbjct: 295 GNNTEPSWSPDGQSIIFTSDRAGGPQIYQMDVVGNGVSLVSAGRGYS---GKISADGSIL 351

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                      I           +L      ++P+ SP+G  +I+S  +    G  L  +
Sbjct: 352 VMIYGD----NIVKKDLATGVTEMLSSTFLDESPSISPNGIMIIYSSTQG--LGKVLQLV 405

Query: 422 DLNGRNE-TLINTPAYASDPQWVGFMD 447
             +GR +  L ++      P W  +++
Sbjct: 406 SADGRFKARLPSSDGQIKFPAWSPYLN 432


>gi|270156706|ref|ZP_06185363.1| Tol-Pal system beta propeller repeat protein TolB [Legionella
           longbeachae D-4968]
 gi|289164847|ref|YP_003454985.1| TolB protein [Legionella longbeachae NSW150]
 gi|269988731|gb|EEZ94985.1| Tol-Pal system beta propeller repeat protein TolB [Legionella
           longbeachae D-4968]
 gi|288858020|emb|CBJ11880.1| TolB protein [Legionella longbeachae NSW150]
          Length = 419

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 112/438 (25%), Positives = 196/438 (44%), Gaps = 23/438 (5%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +N  I L LLL +   F        + +       S + IA   F   +    ++ +V+ 
Sbjct: 2   INRIIKLFLLLFMQQVFA-------LDLELTQGVNSALPIAINSF-GANGTAQEIGQVIE 53

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL  S  F ++S     Q      S+        LGA  +VTGRV + G +R  V F L
Sbjct: 54  NDLNLSGQFRIVSG---PQGPNGQSSVNTL---RQLGADSVVTGRVTQVG-NRYEVSFTL 106

Query: 131 WD-VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            D V     ++ K +  S    R +AH ISD++YQ +TGE+G F++RI ++S      I 
Sbjct: 107 TDAVAKGATLLTKTYQISANQIRPLAHHISDEVYQKLTGERGVFSTRIAYISVQRTPKIT 166

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + SL V D DG N + L  S D I   P +SP+ + ++Y +++ +   +++ +     + 
Sbjct: 167 RYSLEVADADGYNPQSLLVSGDPI-MSPAWSPDGKSISYVSFEKKKA-QIFTVSVETGQ- 223

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            + I +F  +  AP +S +G +  + + K     IYSVD+ S   ++LT    I+    Y
Sbjct: 224 RRLITSFPGINGAPAWSPDGNQLAVVLSKSGTPKIYSVDIHSGTMKQLTFGDAIDTEPRY 283

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +PD   I+F S R G  Q+Y +     +  R++ +   +     ++P    I        
Sbjct: 284 APDGKSILFTSGRGGSPQIYRLSLATGEVARVTFEGNYNARA-SYTPDMKNIVMLHRDDR 342

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE- 428
           +F IG+    G     L      ++P+ +P+GR ++++          +  + L+GR   
Sbjct: 343 QFNIGLQSAAGGPILSLTSSGRDESPSVAPNGRLVLYATHNQDKGVLGI--VSLDGRIRM 400

Query: 429 TLINTPAYASDPQWVGFM 446
            L        +P W  ++
Sbjct: 401 RLPAREGDVQEPAWSPYL 418


>gi|113460408|ref|YP_718470.1| translocation protein TolB [Haemophilus somnus 129PT]
 gi|123031156|sp|Q0I1N1|TOLB_HAES1 RecName: Full=Protein tolB; Flags: Precursor
 gi|112822451|gb|ABI24540.1| biopolymer transport protein [Haemophilus somnus 129PT]
          Length = 434

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 106/447 (23%), Positives = 197/447 (44%), Gaps = 25/447 (5%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSA--NYSPVSIAFTKFVSIDELGGKVS 66
           +     L  L +++   F  ++ A   V++  +    +  P++I   K+   D +   V+
Sbjct: 1   MKFSAYLTTLFIVLFSLFIQTVQAESEVRIVIDEGVDSARPIAIIPFKWNGSDSMPIDVA 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           +++S DL+ S  FN I+     QK T+   +     W+SLG   +V G+V    K    +
Sbjct: 61  DIISADLRNSGKFNPIAVSKMPQKPTSASEVIS-DVWSSLGIDAVVVGQVTPNEKG-YSI 118

Query: 127 EFRLWDV-----KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            ++L D         + +   ++     + R  AHTISD++++ +T  +G F ++I +V 
Sbjct: 119 AYQLVDTIGASGNAGEVLSQNQYAVPKNAIRLGAHTISDEVFEKLTAIRGAFRTKIAYVV 178

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +    G     + V D DG N +++  S  Q L  P +SP+  K+AY ++++     +  
Sbjct: 179 QK-HGGSKPYQVRVADYDGHN-QFIVYSSSQPLMSPAWSPDGSKLAYVSFENRKSQLI-- 234

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +      A + I  F     AP FS +G +   +  KD  ++IY ++L +    +LT+  
Sbjct: 235 VHDLQSGARRVIAAFPGHNGAPAFSPDGSKIAFASSKDGVLNIYVMNLGNGTISQLTSGA 294

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             N   S+SPD   I+F SDR G  Q+Y M   G+    +S  +  S      S  G ++
Sbjct: 295 GNNTEPSWSPDGQSIIFTSDRAGGPQIYQMDVFGNGISLVSAGRGYS---GKISADGSIL 351

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                      I           +L      ++P+ SP+G  +I+S  +    G  L  +
Sbjct: 352 VMIYGD----NIVKKDLATGVTEMLSSTFLDESPSISPNGIMIIYSSTQG--LGKVLQLV 405

Query: 422 DLNGRNE-TLINTPAYASDPQWVGFMD 447
             +GR +  L ++      P W  +++
Sbjct: 406 SADGRFKARLPSSDGQIKFPAWSPYLN 432


>gi|325579033|ref|ZP_08148989.1| tol-Pal system beta propeller repeat protein TolB [Haemophilus
           parainfluenzae ATCC 33392]
 gi|325159268|gb|EGC71402.1| tol-Pal system beta propeller repeat protein TolB [Haemophilus
           parainfluenzae ATCC 33392]
          Length = 427

 Score =  353 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 95/440 (21%), Positives = 180/440 (40%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + L +V+            V++  +        IA   F         + ++V+ D
Sbjct: 4   IKRVMGLFVVMFAFASTAMAEDEVRIVIDEGVDGARPIAVVPFAG--SAPENIGQIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I      Q+ T    + + + W +LG   +V G+V   G     + ++L D
Sbjct: 62  LRNSGKFNPIPVSQMPQQPTTAAEV-KPEAWTALGIDAVVVGQVTSTGSG-YNISYQLVD 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      +    +  +    R  AHT+SD++++ +TG +G F +RI +V +    G
Sbjct: 120 TVGASGTPGAVLAQNSYTVTNKWLRYGAHTVSDEVFEKLTGIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ +++AY +++++    V  +     
Sbjct: 179 SQPYEVRVADYDGYN-QFIVNRSSQPIMSPAWSPDGKRLAYVSFENKKSQLV--VQDLGS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            + K + +F     AP FS +G +   +  +D  ++IY +        +LT     N   
Sbjct: 236 GSRKVVASFPGHNGAPAFSPDGSKLAFASSQDGLLNIYVMGSNGGTPTQLTRGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SPD S I+F SDR G  Q+Y M ++G     +             S  G  +      
Sbjct: 296 SWSPDGSSILFTSDRSGSPQVYRMSASGGGASPV-----GGRGSAQISSDGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTSGSSEVLSTSFLGESPSISPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSNGQVKFPAWSPYL 425


>gi|319775689|ref|YP_004138177.1| TolB protein [Haemophilus influenzae F3047]
 gi|319898096|ref|YP_004136293.1| tolb protein [Haemophilus influenzae F3031]
 gi|317433602|emb|CBY81986.1| TolB protein [Haemophilus influenzae F3031]
 gi|317450280|emb|CBY86496.1| TolB protein [Haemophilus influenzae F3047]
          Length = 427

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 95/440 (21%), Positives = 187/440 (42%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +L +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKCLVSVLAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVVPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAVVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ +T  +G F +RI +V +    G
Sbjct: 120 TVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ Q++AY +++++    V  +     
Sbjct: 179 SQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLV--VQDLNS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I+F SDR G  Q+Y M ++G     +             S  G  +      
Sbjct: 296 AWSPDGNSILFTSDRSGSPQVYRMDASGGSATAV-----GGRGSAQISADGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSDGQVKFPAWSPYL 425


>gi|251793058|ref|YP_003007784.1| translocation protein TolB [Aggregatibacter aphrophilus NJ8700]
 gi|247534451|gb|ACS97697.1| Tol-Pal system beta propeller repeat protein TolB [Aggregatibacter
           aphrophilus NJ8700]
          Length = 426

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 99/441 (22%), Positives = 189/441 (42%), Gaps = 22/441 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEV 68
           + + I +  L +++ G    S  A V++  +    +  P+++   K+         ++++
Sbjct: 1   MKVFIRIFSLFIMLFGLTSVS-RAEVRIVIDEVMDSARPIAVVPFKWNGPGSAPADIAKI 59

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +S DL+ S  FN +      Q+ T+   +   + W++ G + ++ G+V         + +
Sbjct: 60  ISDDLRNSGKFNPMEVSKMPQQPTSAAEV-NPEVWSAQGIEAVIVGQVTP-SNGGFDIAY 117

Query: 129 RLWDV--KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D        +   ++  +    R  AHT+SD+ ++ +TG KG F +RI +V +    
Sbjct: 118 QLVDTMGSAGSILSQNQYTVTQKWLRYGAHTVSDESFEKLTGIKGAFRTRIAYVVQKN-G 176

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     + V D DG N +++     Q    P +SP+ +K+AY +++++    +  +    
Sbjct: 177 GSQPYEVRVSDYDGFN-QFIVNRSSQPFMSPAWSPDGKKLAYVSFENKKAQII--LQDLG 233

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             A K + +F     AP FS +G R   +  KD  ++IY ++L S    +LT+    N  
Sbjct: 234 SMARKVVASFPGHNGAPAFSPDGSRLAFASSKDGVLNIYVINLGSGQVSQLTSGAGNNTE 293

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD   IVF SDR G  Q+Y M ++G     +             S  G  +     
Sbjct: 294 PSWSPDGQSIVFTSDRGGSPQVYRMSASGGGASLV-----GGRGSGQISSDGSTLVMI-- 346

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 I           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR
Sbjct: 347 -DGSNNIVKKDLASGSAEVLSSTFLDESPSISPNGIMIIYSSTQG--LGKVLQLVSADGR 403

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L         P W  ++
Sbjct: 404 FKARLPGNDGQVKFPAWSPYL 424


>gi|162146628|ref|YP_001601087.1| translocation protein TolB [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785203|emb|CAP54749.1| protein tolB precursor [Gluconacetobacter diazotrophicus PAl 5]
          Length = 462

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 158/456 (34%), Positives = 238/456 (52%), Gaps = 31/456 (6%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFV-----------KVATNSANYSPVSIAFTK 54
            +A  L  ++ L     +  G     + A             ++  + A  +P+ I    
Sbjct: 20  LLATHLGRRMLLGTGGGIAAGILAAPLSALAQGAPAAGPGAAEITVDQARTAPIPIVIPA 79

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
                + G  VS V+S DL    +F+ IS          P  +P F  + SLGA+ LV+ 
Sbjct: 80  LGG--DAGALVSSVISGDLGNCGLFSPISGSL-------PVGVPDFGTYKSLGARALVS- 129

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
                G   LRVEFRLWDV   +QI G  + +     RKIAH I+D IY+ + GEKG FN
Sbjct: 130 GSATTGGGGLRVEFRLWDVLTGQQIQGTAYTAGAGDARKIAHIIADVIYERLLGEKGYFN 189

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +RI +++ S         L +MD+DGAN  YL+     +   PRFSP   ++A+ +Y + 
Sbjct: 190 TRIAYIARSGPREHQTTRLAIMDQDGANSHYLS-GGQWLTLTPRFSPTSDQLAFMSYANN 248

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              RVY+++    R  + +G+F  +  APRF+ +G+  ++S  +    DIYSVDL + A 
Sbjct: 249 RP-RVYMLNLATGRQ-QLLGDFEGISFAPRFAPDGRAVILSATRGAGSDIYSVDLVTRAK 306

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            ++T++  I+ S  YSPD SQIVF SDR G  QLY+M + G D +RIS      Y  PVW
Sbjct: 307 RQITSSGAIDTSPCYSPDGSQIVFNSDRGGSPQLYIMSAGGGDARRISY-GNGVYGSPVW 365

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK---- 410
           SP+GDLIAFT+ +   F++GVM  DG+ ER++ +   +++PT+ P+GR + F R+     
Sbjct: 366 SPRGDLIAFTRIANGSFSLGVMAPDGTGERIMTQGFTVESPTFCPNGRVIAFCRQTAAGA 425

Query: 411 -DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
                 S + ++D+ G +E  I     ASDP W   
Sbjct: 426 GGAGFSSGISTVDITGFHERAIP-AGGASDPAWSPL 460


>gi|296117355|ref|ZP_06835945.1| translocation protein TolB [Gluconacetobacter hansenii ATCC 23769]
 gi|295976121|gb|EFG82909.1| translocation protein TolB [Gluconacetobacter hansenii ATCC 23769]
          Length = 457

 Score =  353 bits (905), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 163/448 (36%), Positives = 238/448 (53%), Gaps = 20/448 (4%)

Query: 3   LRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG 62
            R  +   +   +    L   +G     S     ++  + A  +P+ I        + +G
Sbjct: 23  RRGVMGAGIAGGLLATPLFAPVGVAHAQSAAPDAEITVDQARTAPIPIVIPSL--GNGIG 80

Query: 63  GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
            ++++V+S DL    +F  IS          P   P F  + ++GA+ +V+GR    G  
Sbjct: 81  QQITDVISADLGNCGLFRPISASM-------PTGRPDFATYKTMGARAMVSGRAENTGS- 132

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            +RVEFRLWDV    QI G  + +S   WR+IAH ISD IY  + GEKG FNSRI +V+ 
Sbjct: 133 SIRVEFRLWDVTTGSQIQGTAYTASSQDWRRIAHVISDVIYTRLLGEKGYFNSRIAYVAM 192

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S         L +MD+DGA+ RYLT  +   +  PRF+P   ++A+ +Y +    RVYL 
Sbjct: 193 SGPRSHQTRRLAIMDQDGADSRYLTSGQWDTI-TPRFNPANSELAFMSYINNRP-RVYLF 250

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +    +  + +G F  M  APRFS  G   ++SV +    D+YSVDL S +  ++T +  
Sbjct: 251 NLNTGQQ-RMLGEFSGMSFAPRFSPRGDAVVLSVTRGSGSDLYSVDLSSMSRHQITASGA 309

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I+ S  YSPD SQIVF SDR G  QLYVM + G D KRIS      Y  PVWSP+GDLIA
Sbjct: 310 IDTSPCYSPDGSQIVFNSDRGGSPQLYVMPATGGDAKRISY-GHGHYGSPVWSPRGDLIA 368

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-----SK 417
           F++ +   F++GVM  DG+ ER+L +   +++PT+ P+GR L F R+     G     S 
Sbjct: 369 FSRIANGSFSLGVMAPDGTGERILTQGFTVESPTFCPNGRVLAFCRQTAAHAGGAGFSSG 428

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVGF 445
           + SID+ G +E  +     +SDP W   
Sbjct: 429 ISSIDITGFHERPLPV-GSSSDPTWSPL 455


>gi|209543380|ref|YP_002275609.1| translocation protein TolB [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531057|gb|ACI50994.1| Tol-Pal system beta propeller repeat protein TolB
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 462

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 158/456 (34%), Positives = 237/456 (51%), Gaps = 31/456 (6%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFV-----------KVATNSANYSPVSIAFTK 54
            +A  L  ++ L     +  G     + A             ++  + A  +P+ I    
Sbjct: 20  LLATHLGRRMLLGTGGGIAAGILAAPLSAVAQGAPAAGPGAAEITVDQARTAPIPIVIPA 79

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
                + G  VS V+S DL    +F  IS          P  +P F  + SLGA+ LV+ 
Sbjct: 80  LGG--DAGALVSSVISGDLGNCGLFAPISGSL-------PVGVPDFGTYKSLGARALVS- 129

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
                G   LRVEFRLWDV   +QI G  + +     RKIAH I+D IY+ + GEKG FN
Sbjct: 130 GSATTGGGGLRVEFRLWDVLTGQQIQGTAYTAGAGDARKIAHIIADVIYERLLGEKGYFN 189

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +RI +++ S         L +MD+DGAN  YL+     +   PRFSP   ++A+ +Y + 
Sbjct: 190 TRIAYIARSGPRAHQTTRLAIMDQDGANSHYLS-GGQWLTLTPRFSPTSDQLAFMSYANN 248

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              RVY+++    R  + +G+F  +  APRF+ +G+  ++S  +    DIYSVDL + A 
Sbjct: 249 RP-RVYMLNLATGRQ-QLLGDFEGISFAPRFAPDGRAVILSATRGAGSDIYSVDLVTRAK 306

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            ++T++  I+ S  YSPD SQIVF SDR G  QLY+M + G D +RIS      Y  PVW
Sbjct: 307 RQITSSGAIDTSPCYSPDGSQIVFNSDRGGSPQLYIMSAGGGDARRISY-GNGVYGSPVW 365

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK---- 410
           SP+GDLIAFT+ +   F++GVM  DG+ ER++ +   +++PT+ P+GR + F R+     
Sbjct: 366 SPRGDLIAFTRIANGSFSLGVMAPDGTGERIMTQGFTVESPTFCPNGRVIAFCRQTAAGA 425

Query: 411 -DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
                 S + ++D+ G +E  I     ASDP W   
Sbjct: 426 GGAGFSSGISTVDITGFHERAIP-AGGASDPAWSPL 460


>gi|329122257|ref|ZP_08250845.1| translocation protein TolB [Haemophilus aegyptius ATCC 11116]
 gi|327473818|gb|EGF19235.1| translocation protein TolB [Haemophilus aegyptius ATCC 11116]
          Length = 427

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 95/440 (21%), Positives = 187/440 (42%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +L +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKCLVSVLAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVVPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ +T  +G F +RI +V +    G
Sbjct: 120 TVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ Q++AY +++++    V  +     
Sbjct: 179 SQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLV--VQDLNS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I+F SDR G  Q+Y M ++G     +             S  G  +      
Sbjct: 296 AWSPDGNSILFTSDRSGSPQVYRMDASGGSATAV-----GGRGSAQISADGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSDGQVKFPAWSPYL 425


>gi|212219431|ref|YP_002306218.1| TolB [Coxiella burnetii CbuK_Q154]
 gi|212013693|gb|ACJ21073.1| TolB [Coxiella burnetii CbuK_Q154]
          Length = 440

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 102/426 (23%), Positives = 181/426 (42%), Gaps = 14/426 (3%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG---GKVSEVVSKDLQRSDVFNLISQ 84
           F    +  + +       + + IA   F     L      + +V+  DLQ S  F +   
Sbjct: 20  FVPVSYGALDLELTKGVTAAIPIAIMPFAGPSVLAPGDETIPQVIKNDLQNSGQFRVTGS 79

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK-DRKQIIGKK 143
            +  Q   + + I  +  W       LV G +   G  R RV F L +V     +++ + 
Sbjct: 80  GNLDQTAASLEQI-DYSYWRKQKVNALVVGAINPLGMRRYRVAFTLINVFDSNNRLLSES 138

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGA 201
           F  +    R  AH ISD IYQ +TG +G F+++I +V    S  +   K +L V D DG 
Sbjct: 139 FNVNAKELRNFAHHISDLIYQKLTGVRGVFSTKIAYVLVQASSENTAAKYTLEVADADGF 198

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N + L  S D  +  P +SP+  K+AY +++      +YL D    R  +R+     +  
Sbjct: 199 NPQPLLVS-DMPIMSPTWSPDGNKIAYVSFE-GHRAAIYLQDLATGR-RQRLSEAPGING 255

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS + K+  + + K     IY ++L       +T    I+   ++SPD   ++F S+
Sbjct: 256 APAFSPDSKQLALVLTKTGNPKIYILNLADGHLREITKGWSIDTEPAWSPDGKSLLFTSN 315

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R+G  Q+Y          R++   + +   P + P G  I         F I        
Sbjct: 316 RDGTPQIYNYSFADGSINRVTYRGDYNAR-PSFMPDGKSIIMMHRENGLFGIARQDLSTG 374

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDP 440
           Q ++L E    ++P+ +P+G+  I++ +  G     L  + ++G+ +  L        +P
Sbjct: 375 QVQILSESGTDESPSLAPNGKMAIYAMEYGGRG--VLAQVSIDGQIKLRLPARNGNVQEP 432

Query: 441 QWVGFM 446
            W  ++
Sbjct: 433 AWSPYL 438


>gi|153207184|ref|ZP_01945963.1| TolB protein [Coxiella burnetii 'MSU Goat Q177']
 gi|120576845|gb|EAX33469.1| TolB protein [Coxiella burnetii 'MSU Goat Q177']
          Length = 437

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 102/426 (23%), Positives = 181/426 (42%), Gaps = 14/426 (3%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG---GKVSEVVSKDLQRSDVFNLISQ 84
           F    +  + +       + + IA   F     L      + +V+  DLQ S  F +   
Sbjct: 17  FVPVSYGALDLELTKGVTAAIPIAIMPFAGPSVLAPGDETIPQVIKNDLQNSGQFRVTGS 76

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK-DRKQIIGKK 143
            +  Q   + + I  +  W       LV G +   G  R RV F L +V     +++ + 
Sbjct: 77  GNLDQTAASLEQI-DYSYWRKQKVNALVVGAINPLGMRRYRVAFTLINVFDSNNRLLSES 135

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGA 201
           F  +    R  AH ISD IYQ +TG +G F+++I +V    S  +   K +L V D DG 
Sbjct: 136 FNVNAKELRNFAHHISDLIYQKLTGVRGVFSTKIAYVLVQASSENTAAKYTLEVADADGF 195

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N + L  S D  +  P +SP+  K+AY +++      +YL D    R  +R+     +  
Sbjct: 196 NPQPLLVS-DMPIMSPTWSPDGNKIAYVSFE-GHRAAIYLQDLATGR-RQRLSEAPGING 252

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP FS + K+  + + K     IY ++L       +T    I+   ++SPD   ++F S+
Sbjct: 253 APAFSPDSKQLALVLTKTGNPKIYILNLADGHLREITKGWSIDTEPAWSPDGKSLLFTSN 312

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R+G  Q+Y          R++   + +   P + P G  I         F I        
Sbjct: 313 RDGTPQIYNYSFADGSINRVTYRGDYNAR-PSFMPDGKSIIMMHRENGLFGIARQDLSTG 371

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDP 440
           Q ++L E    ++P+ +P+G+  I++ +  G     L  + ++G+ +  L        +P
Sbjct: 372 QVQILSESGTDESPSLAPNGKMAIYAMEYGGRG--VLAQVSIDGQIKLRLPARNGNVQEP 429

Query: 441 QWVGFM 446
            W  ++
Sbjct: 430 AWSPYL 435


>gi|332290106|ref|YP_004420958.1| translocation protein TolB [Gallibacterium anatis UMN179]
 gi|330433002|gb|AEC18061.1| translocation protein TolB [Gallibacterium anatis UMN179]
          Length = 432

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 99/437 (22%), Positives = 192/437 (43%), Gaps = 24/437 (5%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
            +L +       T + A V++  +    +  P+++   K+         +++++S DL+ 
Sbjct: 9   WILAIACLLVQATQVFAEVRIVIDEGVDSARPIAVVPFKWNGPGSAPADIADIISSDLRF 68

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  FN I  D   Q+ T+   +   + W++LG   +V G+V   G     + ++L D   
Sbjct: 69  SGKFNPIPVDRMPQQPTSAGEV-NVEAWSALGIDAIVVGQVTPAGGG-YSISYQLVDTVG 126

Query: 136 R----KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
                  ++ +  ++    W R  AHT+SD +++ +TG +G F +RI +V ++       
Sbjct: 127 ASGTPGAVLSQNSYTVTNQWIRWGAHTVSDQVFEKLTGIRGAFRTRIAYVIQNNSG---S 183

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L V D DG N   +  S   I   P +S + +K+AY+ ++ +  L V  +     ++ 
Sbjct: 184 YDLQVSDYDGYNAFNVFHSSQPI-MSPAWSADGKKLAYSVFEKKKSLLV--LQDLASKSR 240

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           K I +      AP FS +G R   +  +D  ++IY + +   +  +LT+    N   S+S
Sbjct: 241 KIIASLPGHNGAPSFSPDGSRIAFASNEDGVLNIYVMGVGGGSPVKLTSGSGNNTEPSWS 300

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D S I+F SDR G   +Y+M +NG     +S     + +    SP G  I     +   
Sbjct: 301 SDGSSIIFTSDRGGAPAVYMMGANGGGASLVSP--PGNSYSGEMSPDGKEIVMVNGN--- 355

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-T 429
             +     +      L      ++P+++P+G  +I+S  +      +L  +  +GR +  
Sbjct: 356 -KLVKKDLESGSITALTSTFLDESPSFAPNGTMVIYSSTQGVSKVLQL--VSSDGRFKAR 412

Query: 430 LINTPAYASDPQWVGFM 446
           L  +      P W  ++
Sbjct: 413 LPGSGGQIKFPAWSPYL 429


>gi|301169084|emb|CBW28681.1| periplasmic protein [Haemophilus influenzae 10810]
          Length = 427

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 95/440 (21%), Positives = 187/440 (42%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +L +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKRLVSVLAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVVPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAMSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ +T  +G F +RI +V +    G
Sbjct: 120 TVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ Q++AY +++++    V  +     
Sbjct: 179 SQPYEIRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLV--VQDLNS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I+F SDR G  Q+Y M ++G     +             S  G  +      
Sbjct: 296 AWSPDGNSILFTSDRSGSPQVYRMDASGGSATVV-----GGRGSAQISADGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSDGQVKFPAWSPYL 425


>gi|145632629|ref|ZP_01788363.1| translocation protein TolB precursor [Haemophilus influenzae 3655]
 gi|229844455|ref|ZP_04464595.1| translocation protein TolB [Haemophilus influenzae 6P18H1]
 gi|144986824|gb|EDJ93376.1| translocation protein TolB precursor [Haemophilus influenzae 3655]
 gi|229812704|gb|EEP48393.1| translocation protein TolB [Haemophilus influenzae 6P18H1]
          Length = 427

 Score =  352 bits (902), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 95/440 (21%), Positives = 188/440 (42%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +L +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKRLVSVLAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVVPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q+ T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAVSQMPQRPTSAAEV-NPEAWSNIGIDAIVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ +T  +G F +RI +V +    G
Sbjct: 120 TVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ Q++AY +++++    V  +     
Sbjct: 179 SQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLV--VQDLNS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I+F SDR G  Q+Y M ++G     +             S  G  +      
Sbjct: 296 AWSPDGNSILFTSDRSGSPQVYRMDASGGSATVV-----GGRGSAQISADGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSDGQVKFPAWSPYL 425


>gi|195939092|ref|ZP_03084474.1| translocation protein TolB [Escherichia coli O157:H7 str. EC4024]
          Length = 389

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 88/396 (22%), Positives = 178/396 (44%), Gaps = 15/396 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPVSIAFTKFVSIDELGGKVSEVVS 70
           +++    L+      + + +HA V++  +S      P+ +   ++         +  +V+
Sbjct: 5   LRVAFGFLI-----LWASVLHAEVRIVIDSGVDSGRPIGVVPFQWAGPGAAPEDIGGIVA 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+  +   + +   W++LG   +V G+V         V ++L
Sbjct: 60  ADLRNSGKFNPLDRARLPQQPGSAQEV-QPAAWSALGIDAVVVGQVTPNPDGSYNVAYQL 118

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   G 
Sbjct: 119 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQ 177

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  + 
Sbjct: 178 FPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANG 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N   +
Sbjct: 235 AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPT 294

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PDS  + F SD+ G+ Q+Y +  NG   +RI+ +   +  D   S  G  +     +G
Sbjct: 295 WFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNG 353

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            +  I          ++L      + P+ +P+G  +
Sbjct: 354 GQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMV 389



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 78/217 (35%), Gaps = 15/217 (6%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              +A  +Y        Y   T  D   +++   +             R    VQ +   
Sbjct: 126 GTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFR--------TRIAYVVQTNGGQ 177

Query: 283 DIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             Y +   D        +  +    +S ++SPD S++ + +   G+  L +        +
Sbjct: 178 FPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR 237

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWS 398
           +++     +   P +SP G  +AF         + VM     Q R + +  SN   PTW 
Sbjct: 238 QVASFPRHN-GAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWF 296

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           P  ++L F+  + G    ++Y +++NG     I    
Sbjct: 297 PDSQNLAFTSDQAGR--PQVYKVNINGGAPQRITWEG 331



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 8/136 (5%)

Query: 314 SQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           ++I +     G +   +L V   +G +Q  +          P WSP G  +A+  F   +
Sbjct: 165 TRIAYVVQTNGGQFPYELRVSDYDGYNQFVV-HRSPQPLMSPAWSPDGSKLAYVTFESGR 223

Query: 371 FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNE 428
            A+ +        R +     +  AP +SP G  L F+  K G     LY +DL +G+  
Sbjct: 224 SALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGS--LNLYVMDLASGQIR 281

Query: 429 TLINTPAYASDPQWVG 444
            + +  +  ++P W  
Sbjct: 282 QVTDGRSNNTEPTWFP 297


>gi|148827587|ref|YP_001292340.1| translocation protein TolB [Haemophilus influenzae PittGG]
 gi|166229980|sp|A5UGQ1|TOLB_HAEIG RecName: Full=Protein tolB; Flags: Precursor
 gi|148718829|gb|ABQ99956.1| hypothetical protein CGSHiGG_05070 [Haemophilus influenzae PittGG]
          Length = 427

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 93/440 (21%), Positives = 187/440 (42%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +  +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKRLVSVFAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVVPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ +T  +G F +RI +V +    G
Sbjct: 120 TVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ Q++AY +++++    V  +     
Sbjct: 179 SQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLV--VQDLNS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            + K + +F+    AP FS +G R   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GSRKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I+F SDR G  Q+Y M ++G +   +             S  G  +      
Sbjct: 296 AWSPDGNSILFTSDRSGSPQVYRMDASGGNATAV-----GGRGSAQISADGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSDGQVKFPAWSPYL 425


>gi|260582354|ref|ZP_05850147.1| tol-Pal system beta propeller repeat protein TolB [Haemophilus
           influenzae NT127]
 gi|260094722|gb|EEW78617.1| tol-Pal system beta propeller repeat protein TolB [Haemophilus
           influenzae NT127]
          Length = 427

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 93/440 (21%), Positives = 186/440 (42%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +  +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKRLVSVFAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVVPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q+ T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAVSQMPQRPTSAAEV-NPEAWSNIGIDAIVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ +T  +G F +RI +V +    G
Sbjct: 120 TVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ Q++AY +++++    V  +     
Sbjct: 179 SQPYEIRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLV--IQDLNS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              K + +F+    AP FS +G R   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GTRKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I+F SDR G  Q+Y M ++G     +             S  G  +      
Sbjct: 296 AWSPDGNSILFTSDRSGSPQVYRMDASGGSATVV-----GGRGSAQISADGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSDGQVKFPAWSPYL 425


>gi|145630447|ref|ZP_01786228.1| translocation protein TolB precursor [Haemophilus influenzae R3021]
 gi|144984182|gb|EDJ91619.1| translocation protein TolB precursor [Haemophilus influenzae R3021]
          Length = 427

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 94/440 (21%), Positives = 186/440 (42%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +  +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKRLVSVFAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVVPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ +T  +G F +RI +V +    G
Sbjct: 120 TVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ Q++AY +++++    V  +     
Sbjct: 179 SQPYEIRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLV--VQDLNS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I+F SDR G  Q+Y M ++G     +             S  G  +      
Sbjct: 296 AWSPDGNSILFTSDRSGSPQVYRMDASGGSATVV-----GGRGSAQISADGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSDGQVKFPAWSPYL 425


>gi|261855154|ref|YP_003262437.1| Tol-Pal system beta propeller repeat protein TolB [Halothiobacillus
           neapolitanus c2]
 gi|261835623|gb|ACX95390.1| Tol-Pal system beta propeller repeat protein TolB [Halothiobacillus
           neapolitanus c2]
          Length = 435

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 116/440 (26%), Positives = 209/440 (47%), Gaps = 14/440 (3%)

Query: 11  LNMKINLCLLLVLIGGFF--PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           +  +I    L +L G  F  P    A + +  +    S V IA   F +        + +
Sbjct: 1   MKARIQRWGLWILSGLLFLAPAVSQAELNIVISGGQESGVPIAVVPFSTTTN--TDFASI 58

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +  DL RS  F  ++ D    + + P+ + +F  W +  AQ LV G+V+++G    +  F
Sbjct: 59  IDADLARSGQFAPLTTDQMPSQPSAPEQV-QFDQWRTGKAQYLVVGKVVQQG-GNYQATF 116

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSG 187
            L +V + +Q+ G+   +  ++ R IAH I+D I++ ITG +G F+++I +V+E+     
Sbjct: 117 YLLNVTNGQQMTGRVISAPVSAARSIAHRIADIIFKQITGVRGAFDTKIAYVTETDGPGK 176

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             + +L V D DGAN + +  S +  L  P +SP+  K+AY +++      +++ D R  
Sbjct: 177 KRRYTLEVADSDGANPQTVL-SSNFPLMSPTWSPDGSKLAYVSFEGRRS-GIWVQDLRTG 234

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  + +  F  +  AP +S  G +  I++ K  + +IY VDL +    ++TN   IN  A
Sbjct: 235 QRYQ-LTKFPGINGAPSWSPKGNKIAITLSKYHSPNIYVVDLDTRNLTQVTNDGSINTEA 293

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + PD+  +VF SDR G  QL+      S  +R++     +      SP G  +A     
Sbjct: 294 CWLPDNQTLVFTSDRSGSPQLFEKTVGTSSAQRLTFGLSYAAGG-AISPDGKTLALLAGG 352

Query: 368 GEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              F + V    G     R +    + + P+++P+G  LI++ +  G +  K+  +   G
Sbjct: 353 NGGFRVAVQSLSGGGSDLRYISNGGSEERPSFAPNGSMLIYASQVGGSSVLKVSPVSG-G 411

Query: 426 RNETLINTPAYASDPQWVGF 445
            ++TL        DP W  F
Sbjct: 412 ESQTLRFARGKVRDPAWGPF 431


>gi|16272330|ref|NP_438543.1| translocation protein TolB [Haemophilus influenzae Rd KW20]
 gi|260580555|ref|ZP_05848383.1| tol-Pal system beta propeller repeat protein TolB [Haemophilus
           influenzae RdAW]
 gi|1174729|sp|P44677|TOLB_HAEIN RecName: Full=Protein tolB; Flags: Precursor
 gi|1573352|gb|AAC22040.1| colicin tolerance protein (tolB) [Haemophilus influenzae Rd KW20]
 gi|260092897|gb|EEW76832.1| tol-Pal system beta propeller repeat protein TolB [Haemophilus
           influenzae RdAW]
          Length = 427

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 94/440 (21%), Positives = 187/440 (42%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +  +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKRLVSVFAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVVPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q+ T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAVSQMPQRPTSAAEV-NPEAWSNIGIDAIVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ +T  +G F +RI +V +    G
Sbjct: 120 TVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ Q++AY +++++    V  +     
Sbjct: 179 SQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLV--VQDLNS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I+F SDR G  Q+Y M ++G     +             S  G  +      
Sbjct: 296 AWSPDGNSILFTSDRSGSPQVYRMDASGGSATAV-----GGRGSAQISADGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSDGQVKFPAWSPYL 425


>gi|68248985|ref|YP_248097.1| translocation protein TolB [Haemophilus influenzae 86-028NP]
 gi|81336603|sp|Q4QNG0|TOLB_HAEI8 RecName: Full=Protein tolB; Flags: Precursor
 gi|68057184|gb|AAX87437.1| TolB [Haemophilus influenzae 86-028NP]
          Length = 427

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 94/440 (21%), Positives = 187/440 (42%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +  +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKRLVSVFAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVVPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q+ T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAVSQMPQRPTSAAEV-NPEAWSNIGIDAIVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ +T  +G F +RI +V +    G
Sbjct: 120 TVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ Q++AY +++++    V  +     
Sbjct: 179 SQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLV--VQDLNS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I+F SDR G  Q+Y M ++G     +             S  G  +      
Sbjct: 296 AWSPDGNSILFTSDRSGSPQVYRMDASGGSATAV-----GGRGSAQISADGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSDGQVKFPAWSPYL 425


>gi|254468571|ref|ZP_05081977.1| Tol-Pal system beta propeller repeat protein TolB [beta
           proteobacterium KB13]
 gi|207087381|gb|EDZ64664.1| Tol-Pal system beta propeller repeat protein TolB [beta
           proteobacterium KB13]
          Length = 425

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 111/429 (25%), Positives = 207/429 (48%), Gaps = 13/429 (3%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI--DELGGKVSEVVSKDLQRS 76
           L  + I  F+   + A   +       + +S+A   F     +    ++  V+  DL RS
Sbjct: 4   LAFLFITLFYLIPLPAIEVIDILGGKANELSVAVIPFQDDLIENEKNQIHNVIKSDLSRS 63

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F +I      +  T+ + +  +  W+ L  ++LV GRV + G ++++V + L DV   
Sbjct: 64  GFFRVIDTGGVNKLPTSLNDV-DYSFWSGLQTELLVIGRVQR-GDNQIKVVYELIDVFKE 121

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           K ++  ++  +    R+I H IS+ IY+ ITG KG F+++I FV +   +   K  L V 
Sbjct: 122 KMMVSSEYSGNIKQDRQIGHQISNIIYEKITGSKGVFHTKIGFVQKINNN---KYQLNVS 178

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D DG N + +  S   I+   R+SP+ +K+AY +++ +  + +Y+ + + +   + + NF
Sbjct: 179 DMDGFNKKAIVTSNQPIIST-RWSPDGEKIAYVSFEKKKPV-IYVQNLK-NGERQLVANF 235

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +    AP +S + K+  I +  +    IY ++      +RL  +  I+    ++PD   I
Sbjct: 236 KGNNSAPAWSPDNKQLAIVLTYNNFSQIYVMNADGKNIKRLMRSRSIDTEPVWAPDGKSI 295

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            F SDR G  Q+Y +       KR++ + + +   P  SP G L+ F       F +GV 
Sbjct: 296 YFVSDRGGGPQIYKIDLKTEQIKRVTFEGKYNV-SPQLSPDGKLLTFITNDNGAFKVGVQ 354

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA- 435
               +Q   L +  N +AP +SP+G  ++++  KD +  + L ++ LNG    +INT + 
Sbjct: 355 NLISNQVIKLTQGRNDEAPVFSPNGHMVLYT-HKDSEKETSLSTVSLNGFKTQVINTDSV 413

Query: 436 YASDPQWVG 444
              +  W  
Sbjct: 414 RNYEATWSP 422


>gi|229846469|ref|ZP_04466577.1| translocation protein TolB [Haemophilus influenzae 7P49H1]
 gi|229810562|gb|EEP46280.1| translocation protein TolB [Haemophilus influenzae 7P49H1]
          Length = 427

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 95/440 (21%), Positives = 186/440 (42%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +  +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKRLVSVFAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVVPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ +T  +G F +RI +V +    G
Sbjct: 120 TVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ Q++AY +++++    V  +     
Sbjct: 179 SQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLV--VQDLNS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I+F SDR G  Q+Y M ++G     +             S  G  +      
Sbjct: 296 AWSPDGNSILFTSDRSGSPQVYRMDASGGSATAV-----GGRGSAQISADGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  I  +GR 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLISADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSDGQVKFPAWSPYL 425


>gi|148825336|ref|YP_001290089.1| translocation protein TolB [Haemophilus influenzae PittEE]
 gi|166229979|sp|A5UAA5|TOLB_HAEIE RecName: Full=Protein tolB; Flags: Precursor
 gi|148715496|gb|ABQ97706.1| translocation protein TolB precursor [Haemophilus influenzae
           PittEE]
 gi|309972459|gb|ADO95660.1| Outer membrane integrity protein TolB [Haemophilus influenzae
           R2846]
          Length = 427

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 94/440 (21%), Positives = 187/440 (42%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +  +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKRLVSVFAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVVPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q+ T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAVSQMPQRPTSAAEV-NPEAWSNIGIDAIVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ +T  +G F +RI +V +    G
Sbjct: 120 TVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ Q++AY +++++    V  +     
Sbjct: 179 SQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLV--VQDLNF 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I+F SDR G  Q+Y M ++G     +             S  G  +      
Sbjct: 296 AWSPDGNSILFTSDRSGSPQVYRMDASGGSATVV-----GGRGSAQISADGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSDGQVKFPAWSPYL 425


>gi|50085692|ref|YP_047202.1| translocation protein TolB [Acinetobacter sp. ADP1]
 gi|67461952|sp|Q6F985|TOLB_ACIAD RecName: Full=Protein tolB; Flags: Precursor
 gi|49531668|emb|CAG69380.1| tolerance to colicins E2, E, A, and K, required for OM integrity
           [Acinetobacter sp. ADP1]
          Length = 425

 Score =  350 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 106/437 (24%), Positives = 195/437 (44%), Gaps = 18/437 (4%)

Query: 13  MKINLCLLLVLIGGF---FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
           M     L   L+        ++  A + +    A      IA   F +       +  +V
Sbjct: 1   MTRKHILSFALMTALGMTVTSTAFAQLHLEIAKAPEQAPKIAIVPFGND----QSIFPIV 56

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
             DL RS  F+  S++      T      +   W + G   +V G +     +   V ++
Sbjct: 57  ENDLNRSGRFSSASKNL---PTTASIDAIQASAWQAAGIPYVVVGNLKPAANNAFEVHYQ 113

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+DV+ ++ ++ +      +  R+ AH ISD IYQ++TG  GDF+ RI +V  +  +   
Sbjct: 114 LYDVQKQQYLLNEVLTVPASRVRQAAHMISDAIYQALTGIAGDFSGRIAYVLRNPATPDQ 173

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L + D DG   + +  SRD I   P ++P+ +K+AY +++ +    +YL D    + 
Sbjct: 174 RYTLQIADTDGEQPKTVLSSRDPI-LSPAWTPDAKKIAYVSFETKRPA-IYLQDLATGQ- 230

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            + + +F+ +  AP FS +GK  L +   +   +IY +DL +   +R+TN   I+  A Y
Sbjct: 231 REVLASFKGLNGAPSFSPDGKSMLFTASMNGNPEIYQMDLSTRQLQRMTNDNAIDTEARY 290

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SG 368
           +PD    +F SDR G  Q+Y    + S  KR++    A       S  G  IA     SG
Sbjct: 291 APDGKSFIFTSDRGGSPQIYRYSFDDSSTKRLTFRG-AFNARGTLSADGKNIALVHRPSG 349

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             + + +M        +L   S  ++P++SP+G+ ++++  +       +  +  +GR  
Sbjct: 350 SNYKVAIMNISTGIVNILTPTSLDESPSFSPNGQMVVYATYEGSRGLLSI--MSTDGRFR 407

Query: 429 -TLINTPAYASDPQWVG 444
             L +      +P W  
Sbjct: 408 MNLPSEQGEVREPAWAP 424


>gi|149910559|ref|ZP_01899198.1| Periplasmic component of the Tol biopolymer transport system
           [Moritella sp. PE36]
 gi|149806402|gb|EDM66375.1| Periplasmic component of the Tol biopolymer transport system
           [Moritella sp. PE36]
          Length = 441

 Score =  350 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 98/439 (22%), Positives = 196/439 (44%), Gaps = 32/439 (7%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKV---SEVVSKDLQRSDVFNLISQDS 86
            HA +++       +  PV++   K++ +      +   + V++ DL+ S  F+ + +  
Sbjct: 6   AHAALEIVITEGTNSARPVAVVPFKWLGVQPKPKDMTDFASVIADDLRNSGRFSPLERSL 65

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR---------- 136
             Q      ++  +  W   G + +V G +      RL++ F+L +V             
Sbjct: 66  MPQTPATESAV-NYAAWKETGVEAIVIGTIKPLQDGRLQIHFQLINVLSGFKNQTPQKID 124

Query: 137 KQI--------IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           +Q+        +  K   S    R I+H +SD I++++TG +G F +RI +V+ +     
Sbjct: 125 EQLVINNDHIKLNLKGNFSTRRPRHISHRLSDYIFENLTGTRGAFLTRIAYVAIN-YDDK 183

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L + D DG N   L  S + +   P + P  +K+AY + +D+    +++ D  + +
Sbjct: 184 YPFKLLISDYDGMNQHVLFRSTEPV-MSPSWDPTGKKLAYMSMEDKK-HEIWIYDL-VTQ 240

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             + I  ++   + P FS +G +  + + K    D+Y  DL++   +RLT    I+  A+
Sbjct: 241 KRELIEPYKGSNIFPVFSPDGSKLSMILSKSGQADVYVYDLKTKKLDRLTKNRGIDTEAT 300

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++PD   IVF S+R G+ Q+Y +       KR++ +  A+  +P  SP G  +       
Sbjct: 301 WAPDGKSIVFTSERGGRPQIYQINLESKKIKRLTFEGNANL-NPSISPDGKNLVMVSLQK 359

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            K+++          + L      ++P+ +P+G  +I+S    G     L S+D  GR +
Sbjct: 360 GKYSVTKQDLSDGYVQKLTNGRLDKSPSIAPNGSMVIYSTVVKGKQVLSLVSMD--GRFK 417

Query: 429 TLIN-TPAYASDPQWVGFM 446
            ++  +      P W  F+
Sbjct: 418 AVLPASDGEVKAPAWSPFL 436


>gi|145636350|ref|ZP_01792019.1| translocation protein TolB precursor [Haemophilus influenzae
           PittHH]
 gi|145270515|gb|EDK10449.1| translocation protein TolB precursor [Haemophilus influenzae
           PittHH]
          Length = 427

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 96/440 (21%), Positives = 187/440 (42%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +  +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKRLVSVFAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVVPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ ++G +G F +RI +V +    G
Sbjct: 120 TVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLSGIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SPN Q++AY +++++    V  +     
Sbjct: 179 SQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPNGQRLAYVSFENKKSQLV--VQDLNS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I+F SDR G  Q+Y M +NG     +             S  G  +      
Sbjct: 296 AWSPDGNSILFTSDRSGSPQVYRMDANGGSATVV-----GGRGSAQISADGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSDGQVKFPAWSPYL 425


>gi|309750199|gb|ADO80183.1| Outer membrane integrity protein TolB [Haemophilus influenzae
           R2866]
          Length = 427

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 93/440 (21%), Positives = 185/440 (42%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +  +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKRLVSVFAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVLPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAVSQMPQHPTSVAEV-NPEAWSNIGIDAIVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ +T  +G F +RI +V +    G
Sbjct: 120 TVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ Q++AY +++++    V  +     
Sbjct: 179 SQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLV--VQDLNS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              K + +F+    AP FS +G R   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GTRKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I+F SDR G  Q+Y M ++G     +             S  G  +      
Sbjct: 296 AWSPDGNSILFTSDRSGSPQVYRMDASGGSATVV-----GGRGSAQISADGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSDGQVKFPAWSPYL 425


>gi|1685080|gb|AAC44597.1| TolB [Haemophilus influenzae]
          Length = 427

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 95/440 (21%), Positives = 186/440 (42%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +  +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKHLVSVFAIILAITHNVFAGDEVRIVIDEGVDGARPIAVVPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ +TG +G F +RI +V +    G
Sbjct: 120 TVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTGIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ Q++AY +++++    V  +     
Sbjct: 179 SQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLV--VQDLNS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              K + +F+    AP FS +G R   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GTRKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I+F SDR G  Q+Y M +NG     +             S  G  +      
Sbjct: 296 AWSPDGNSILFTSDRSGSPQVYRMDANGGSVTSV-----GGRGSAQISADGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSDGQVKFPAWSPYL 425


>gi|118594344|ref|ZP_01551691.1| translocation protein TolB precursor [Methylophilales bacterium
           HTCC2181]
 gi|118440122|gb|EAV46749.1| translocation protein TolB precursor [Methylophilales bacterium
           HTCC2181]
          Length = 432

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 114/442 (25%), Positives = 206/442 (46%), Gaps = 15/442 (3%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG--GKVSEV 68
           +         L+ +      S HA   +       S + +A   F   +       + EV
Sbjct: 1   MKQSFWKFFFLIWLVCISNAS-HALEVIEILGGKASQIPVAVIPFKDNNAQKSMQLMHEV 59

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG--KDRLRV 126
           ++ DL RS +F+ I          +   +  F +W +L +Q +V G++   G    +++V
Sbjct: 60  ITNDLNRSGLFSSIDISGVSDYPIDEREV-NFSNWAALQSQFIVVGKIDAIGRSNSQMQV 118

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            + L D+   K ++       P+ +R IAH I+D IY+ +TG KG F++ I FV +    
Sbjct: 119 TWSLIDIYKEKTVLSVAIKGQPSQYRVIAHRIADTIYEKLTGSKGVFDTNIAFVKK---L 175

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G  K SL + D DG N R +  SR  I+  PR+SPN +K+AY +++ +  + +Y+ D   
Sbjct: 176 GKEKYSLFIADYDGHNPRAIVNSRYSII-SPRWSPNGKKIAYVSFEKKKPV-IYVQDIET 233

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +    + NFR    AP +S + K+  I +       IY++D      ++L  T  IN  
Sbjct: 234 GK-RTLLANFRGNNSAPAWSPDSKKLAIVLTYSANSQIYTIDADGKNIKQLMRTRSINTE 292

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SP+  +I F SDR G  Q+Y +  + ++  R++ +   +   P  SP G L+ F   
Sbjct: 293 PAWSPNGKEIYFSSDRAGSAQIYKVDVDTNEVVRVTFEGNNNV-SPSLSPDGKLLLFLNQ 351

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               + + +     +Q   L    + ++P +SP+G  ++F+ K  G   +K+ ++ +NG 
Sbjct: 352 DNGSYRVAIQNLLSNQMLKLTNGPDDESPIFSPNGHMVLFTYKDYGK-VTKIGTVSINGL 410

Query: 427 NETLINTPAYAS-DPQWVGFMD 447
             T I+  + A  +  W    D
Sbjct: 411 KMTPIDVGSEAILESTWGPLYD 432


>gi|58698639|ref|ZP_00373533.1| tolB protein, putative [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225629902|ref|YP_002726693.1| translocation protein TolB precursor [Wolbachia sp. wRi]
 gi|254764846|sp|C0R560|TOLB_WOLWR RecName: Full=Protein tolB; Flags: Precursor
 gi|58534840|gb|EAL58945.1| tolB protein, putative [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225591883|gb|ACN94902.1| translocation protein TolB precursor [Wolbachia sp. wRi]
          Length = 420

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 146/433 (33%), Positives = 227/433 (52%), Gaps = 26/433 (6%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----IDELGGKVSEVVSKDLQR 75
           L++ I  F P    A + V    ++   + +  +K         EL   +++V+  +L  
Sbjct: 7   LVLFISLFIPYFTKAALYVDIKKSSVGNIGLVVSKCTCKTALESELSENIAKVIGTNLSN 66

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
             +FN+       ++    +S    + W S     +VT  + +     L + FRL+D   
Sbjct: 67  CGLFNV-------KRGAEAES----KSWKS---DTVVTVSLSEISGSALELSFRLFDTFT 112

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLC 194
           +++++ +        WRKI H +SD I+  + GEKG FN++I +++E   S       + 
Sbjct: 113 KRELLTQSVVFPAKDWRKIGHLVSDVIHDRLIGEKGHFNTKITYIAEEKDSNYKSVRKIA 172

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           VM++DG+NI+YLT   D+ +  PRFSPN + + Y +Y +     +  +    D     I 
Sbjct: 173 VMNQDGSNIKYLTNG-DRFVSTPRFSPNGKGIVYISYANGKSYII--LKNLKDNTESIIS 229

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            F  ++ APRFS +GK  LIS       +I S+DL S  T+++T    I+ S S+SPD  
Sbjct: 230 TFEGVVSAPRFSPDGKSLLISHSLGGETNILSLDLSSKRTKKITKGSAISTSPSFSPDQK 289

Query: 315 QIVFESDREGKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            + F SD  G +QLYV+   +     KRIS      Y  PVWSP+GDLIAFTK    KF 
Sbjct: 290 YMAFSSDISGSQQLYVIDFTNKSKKPKRISF-GSGRYATPVWSPKGDLIAFTKIQSGKFY 348

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           IGVMK DG +ERLL E   +++P W P+GR +IF+R +   + SKLY +DL  +N+ +++
Sbjct: 349 IGVMKPDGKEERLLSEGHKIESPAWLPNGREIIFTRTES-PSNSKLYLVDLVKKNQKMVS 407

Query: 433 TPAYASDPQWVGF 445
           TP  AS P W  F
Sbjct: 408 TPTNASLPDWSYF 420


>gi|126668393|ref|ZP_01739350.1| translocation protein TolB precursor [Marinobacter sp. ELB17]
 gi|126627102|gb|EAZ97742.1| translocation protein TolB precursor [Marinobacter sp. ELB17]
          Length = 449

 Score =  348 bits (894), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 108/435 (24%), Positives = 206/435 (47%), Gaps = 13/435 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG--GKVSEVVS 70
           ++  + L  +L        + A + +       S + IA   F     +     ++++V 
Sbjct: 24  VRAGMALFFLLATSL---PLRAELLIRITEGVDSALPIAVVPFAESGAIPPGDTLADIVQ 80

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL  S  F  +  +      +    +  F+DW  LG + ++ G++ ++G DRL   + L
Sbjct: 81  SDLTMSSEFRTLPAEKMLSLPSQRSEVH-FRDWRLLGQRYVLVGQLTRQG-DRLEARYEL 138

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +DV   ++I+G+   +   + R +AH +SD +Y++ITGE+G F++++ +++   V   ++
Sbjct: 139 FDVNREERILGESAGAPLGNLRTLAHYVSDRVYEAITGERGAFSTQLAYITRENVGDKVR 198

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L V D DG   R    S + I   P +S +  ++AY +++      +Y+ +    +  
Sbjct: 199 YRLQVSDIDGKRSRVRLESAEPI-LSPAWSRDGSRLAYVSFETGKPA-IYVHELASGKRT 256

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           K I +FR +  AP +S +GK  L+++ KD   DIY +DL S    +LT+   I   A+YS
Sbjct: 257 K-IADFRGLNSAPAWSPDGKSLLMTLSKDGNADIYRMDLASRDLTKLTDHWAIETEATYS 315

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
               +I F SDR G  Q+Y  +  G + +R++     +   P    +G+ + +       
Sbjct: 316 AGGDEIFFTSDRSGGPQIYRQKGKG-EPRRMTFGSRYNAR-PRPDHKGEFVYYVHQRSSG 373

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           F I        +E +L    + ++P+ SP+GR LI++ ++ G +   + S D  G   +L
Sbjct: 374 FHIARTNLKSGEETVLTRTESDESPSVSPNGRMLIYATRQGGASVLTVISADG-GAAYSL 432

Query: 431 INTPAYASDPQWVGF 445
             T     +P W   
Sbjct: 433 PATEGDVREPAWGPL 447


>gi|254499317|ref|ZP_05111989.1| TolB colicin import protein [Legionella drancourtii LLAP12]
 gi|254351472|gb|EET10335.1| TolB colicin import protein [Legionella drancourtii LLAP12]
          Length = 419

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 101/429 (23%), Positives = 191/429 (44%), Gaps = 17/429 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF 79
            + L        + A + +       S + IA   F   D    ++S+++  DL  S  F
Sbjct: 5   FITLFILLVTQQVFA-LDLELTQGISSALPIAINTF-GSDRASQEISQIIENDLTFSGQF 62

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD-VKDRKQ 138
            ++S          P++         LGA  +VTGRV+  G +   + F L D V +   
Sbjct: 63  KIVS------GPQGPNAQSSVSTLKQLGADSVVTGRVVPVG-NHYEISFTLTDAVANGTT 115

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++ K +  +    R +AH ISD++YQ +TGE+G F++RI ++S          +L V D 
Sbjct: 116 LLTKTYQVNANQLRPLAHHISDEVYQKLTGERGIFSTRIAYISVQRTPQKTNYALEVADA 175

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG N + L  S + I   P ++PN + ++Y +++ +   +++ +     +  + I +F  
Sbjct: 176 DGHNPQSLLISSEPI-MSPSWAPNGKSISYVSFEKKRA-QIFTVSVETGQ-RRLITSFPG 232

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +  AP +S +G++  + + K     IYSVD+ S   ++LT    I+    Y+PD   I+F
Sbjct: 233 INGAPAWSPDGRQLAVVLSKSGTPKIYSVDINSGNMKQLTFGDAIDTEPRYAPDGKSILF 292

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S R G  Q+Y +        R++ +   +     ++P    I       ++F IG+   
Sbjct: 293 TSGRGGSPQIYRLSLADGQVSRMTFEGNYNARA-SYTPDMKSIVMLHRDDKQFNIGMQNV 351

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYA 437
            G     L      ++P+ +P+GR ++++          +  + L+GR    L       
Sbjct: 352 SGGPVVSLTFSGRDESPSVAPNGRLILYATHNQDKGILGI--VSLDGRIRMKLPARDGDI 409

Query: 438 SDPQWVGFM 446
            +P W  ++
Sbjct: 410 QEPAWSPYL 418


>gi|54297484|ref|YP_123853.1| TolB protein [Legionella pneumophila str. Paris]
 gi|67461926|sp|Q5X4Z1|TOLB_LEGPA RecName: Full=Protein tolB; Flags: Precursor
 gi|53751269|emb|CAH12680.1| TolB protein [Legionella pneumophila str. Paris]
          Length = 419

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 113/435 (25%), Positives = 191/435 (43%), Gaps = 22/435 (5%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
           +I    LL+  G          + +       S + IA   F   D    ++  V+  DL
Sbjct: 4   RIISLFLLLFTGQVIA------LDLELTQGINSALPIAINSF-GSDAAAQEIGNVIENDL 56

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD- 132
             S  F +IS           +S         LGA  +VTGRV + G +R+ V F L D 
Sbjct: 57  TISGQFKIIS------GPQGANSQSSVSTLRQLGADSVVTGRVNQVG-NRIEVSFTLADA 109

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V +   ++ K F  +    R +AH ISD++YQ +TGE+G F++RI ++S     G  + S
Sbjct: 110 VANGNILLTKTFQINANQVRALAHHISDEVYQKLTGERGIFSTRIAYISVQRNGGRSRYS 169

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V D DG N + L  S + I   P +SPN + ++Y +++ +    ++ +     +  + 
Sbjct: 170 LEVADADGHNPQSLLVSSEPI-MSPSWSPNGKSISYVSFEKKKA-EIFTVSVETGQ-RRL 226

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I +F  +  AP +S +G+   + + K     IY VDL S + ++LT    I+    YSPD
Sbjct: 227 ITSFPGINGAPAWSPDGRHLAVVLSKSGTPKIYDVDLSSGSMKQLTFGNSIDTEPRYSPD 286

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              ++F S R G  Q+Y +        R++ +   +     ++P    I        +F 
Sbjct: 287 GRSLLFTSGRGGSPQVYRLSLADGQISRVTFEGNYNARA-SYTPDMKHIVMLHREDRQFN 345

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLI 431
           IGV    G     L      ++P+ SP+ R ++++ +        + SID  GR    L 
Sbjct: 346 IGVQNTGGGPISNLTFSGLDESPSVSPNSRLVLYATRYQDRGVLGIVSID--GRIRMRLP 403

Query: 432 NTPAYASDPQWVGFM 446
                  +P W  ++
Sbjct: 404 AREGDVQEPAWSPYL 418


>gi|255319441|ref|ZP_05360656.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           radioresistens SK82]
 gi|262379404|ref|ZP_06072560.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           radioresistens SH164]
 gi|255303509|gb|EET82711.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           radioresistens SK82]
 gi|262298861|gb|EEY86774.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           radioresistens SH164]
          Length = 427

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 108/439 (24%), Positives = 196/439 (44%), Gaps = 18/439 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPT---SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
           +NM     L L L   F P    +  A + +    A      IA   F +       +  
Sbjct: 1   MNMTRKTLLALALTAVFSPAITTTAFAQLHLEIAKAPEEAPKIAIAPFAND----QSIYP 56

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +V  DL RS  F   S++      +   +    Q W +     +VTG +     D   V 
Sbjct: 57  IVESDLNRSGRFTSSSKNL---PASAALNNINAQSWQAAKIPYVVTGSIKSVAGDSYEVH 113

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           ++L+DV+ +  ++ +      +  R+  H ISD IYQ++TG  GDF+ RI +V  +  + 
Sbjct: 114 YQLYDVEKQTYLLNELLTVPASRIRQAGHMISDAIYQALTGIPGDFSGRIAYVLRNPATP 173

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             + +L + D DG   R +  SRD I   P ++P+ +K+AY +++ +    +Y+ D    
Sbjct: 174 EQRYTLQIADTDGEQPRTVLSSRDPI-LSPAWTPDAKKLAYVSFETKRPA-IYVQDLATG 231

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  + + +FR +  AP FS +G+  L +       ++Y +DL +   +R+TN   I+  A
Sbjct: 232 Q-REVLASFRGLNGAPSFSPDGQSMLFTASMHGNPEVYQMDLTTRQLKRMTNNSAIDTEA 290

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
            Y+PD    +F SDR G  Q+Y         KR++    A       S  G  +A     
Sbjct: 291 RYAPDGKSFIFTSDRGGSAQIYRYSFADGSVKRLTFKG-AFNARGTLSADGKKVALVHRP 349

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +G  + + +         +L   S  ++P++SP+G+ ++++  ++G+ G  L  +  +GR
Sbjct: 350 AGSNYKVAIQDIATGITNILTPTSLDESPSFSPNGQMVVYAT-REGNRGL-LAIMSTDGR 407

Query: 427 NE-TLINTPAYASDPQWVG 444
               L +      +P W  
Sbjct: 408 FRMNLPSEQGEVREPAWTP 426


>gi|145634622|ref|ZP_01790331.1| translocation protein TolB precursor [Haemophilus influenzae
           PittAA]
 gi|145268167|gb|EDK08162.1| translocation protein TolB precursor [Haemophilus influenzae
           PittAA]
          Length = 427

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 95/440 (21%), Positives = 187/440 (42%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +  +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKHLVGVFAIILAITHNVFAGDEVRIVIDEGVDGARPIAVVPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ +TG +G F +RI +V +    G
Sbjct: 120 TVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTGIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V D DG N +++     Q +  P +SP+ Q++AY +++++    V  +     
Sbjct: 179 SQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLV--VQDLNS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A K + +F+    AP FS +G R   +  +D  ++IY +        +LT+    N   
Sbjct: 236 GARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I+F SDR G  Q+Y M ++G     +             S  G  +      
Sbjct: 296 AWSPDGNSILFTSDRSGSPQVYRMDASGGSATAV-----GGRGSAQISADGKTLVMI--- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 348 NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 406 KASLPGSDGQVKFPAWSPYL 425


>gi|42519955|ref|NP_965870.1| translocation protein TolB [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|67461989|sp|Q73IV6|TOLB_WOLPM RecName: Full=Protein tolB; Flags: Precursor
 gi|42409692|gb|AAS13804.1| tolB protein, putative [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 420

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 145/433 (33%), Positives = 224/433 (51%), Gaps = 26/433 (6%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----IDELGGKVSEVVSKDLQR 75
           L++ I  F P    A + V    ++   + +  +K         EL   +++V+  +L  
Sbjct: 7   LVLFISLFIPYFTKAALYVDIKKSSVGNIGLVVSKCTCKTALESELSENIAKVIGTNLSN 66

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
             +FN+              +    + W S     +VT  + +     L + FRL+D   
Sbjct: 67  CGLFNV-----------KRSAEAESKSWKS---DTVVTVSLSEISGSALELSFRLFDAFT 112

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLC 194
           +++++ +        WRKI H +SD I+  + GEKG FN++I +++E   S       + 
Sbjct: 113 KRELLTQSVVFPAKDWRKIGHLVSDVIHDRLIGEKGHFNTKITYIAEEKDSNYKSVRKIA 172

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           VM++DG+NI+YLT   D+ +  PRFSPN + + Y +Y +     +  +    D     I 
Sbjct: 173 VMNQDGSNIKYLTNG-DRFVSTPRFSPNGKGIVYISYANGKSYII--LKNLKDNTESIIS 229

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            F  ++ APRFS +GK  LIS       +I S+DL S  T+++T    I+ S S+SPD  
Sbjct: 230 AFEGVVSAPRFSPDGKSLLISHSLGGETNILSLDLSSKRTKKITKGSAISTSPSFSPDQK 289

Query: 315 QIVFESDREGKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            + F SD  G +QLYV+   +     KRIS      Y  PVWSP+GDLIAFTK    KF 
Sbjct: 290 YMAFSSDISGSQQLYVIDFTNKSKKPKRISF-GSGRYATPVWSPKGDLIAFTKIQSGKFY 348

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           IGVMK DG +ERLL E   +++P W P+GR +IF+R +   + SKLY +DL  +N+ +++
Sbjct: 349 IGVMKPDGKEERLLSEGHKIESPAWLPNGREIIFTRTES-PSNSKLYLVDLVKKNQKMVS 407

Query: 433 TPAYASDPQWVGF 445
           TP  AS P W  F
Sbjct: 408 TPTNASLPDWSYF 420


>gi|148359107|ref|YP_001250314.1| TolB colicin import protein [Legionella pneumophila str. Corby]
 gi|166229981|sp|A5IC68|TOLB_LEGPC RecName: Full=Protein tolB; Flags: Precursor
 gi|148280880|gb|ABQ54968.1| TolB colicin import protein [Legionella pneumophila str. Corby]
          Length = 419

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 115/438 (26%), Positives = 192/438 (43%), Gaps = 23/438 (5%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            N  I+L LLL              + +       S + IA   F   D    ++  V+ 
Sbjct: 2   FNRIISLFLLLFTGQVIA-------LDLELTQGINSALPIAINSF-GSDAAAQEIGNVIE 53

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL  S  F +IS           +S         LGA  +VTGRV + G +R+ V F L
Sbjct: 54  NDLTISGQFKIIS------GPQGANSQSSVSTLRQLGADSVVTGRVNQVG-NRIEVSFTL 106

Query: 131 WD-VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            D V +   ++ K F  +    R +AH ISD++YQ +TGE+G F++RI ++S     G  
Sbjct: 107 ADAVANGNILLTKTFQINANQVRALAHHISDEVYQKLTGERGIFSTRIAYISVQRNGGRS 166

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + SL V D DG N + L  S + I   P +SPN + ++Y +++ +    ++ +     + 
Sbjct: 167 RYSLEVADADGHNPQSLLVSSEPI-MSPSWSPNGKSISYVSFEKKKA-EIFTVSVETGQ- 223

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            + I +F  +  AP +S +G+   + + K     IY VDL S + ++LT    I+    Y
Sbjct: 224 RRLITSFPGINGAPAWSPDGQHLAVVLSKSGTPKIYDVDLSSGSMKQLTFGNSIDTEPRY 283

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   ++F S R G  Q+Y +        R++ +   +     ++P    I        
Sbjct: 284 SPDGRSLLFTSGRGGSPQVYRLSLADGQISRVTFEGNYNARA-SYTPDMKHIVMLHREDR 342

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE- 428
           +F IGV    G     L      ++P+ SP+ R ++++ +        + SID  GR   
Sbjct: 343 QFNIGVQNTGGGPISNLTFSGLDESPSVSPNSRLVLYATRYQNRGVLGIVSID--GRIRM 400

Query: 429 TLINTPAYASDPQWVGFM 446
            L        +P W  ++
Sbjct: 401 RLPAREGDVQEPAWSPYL 418


>gi|121998996|ref|YP_001003783.1| translocation protein TolB [Halorhodospira halophila SL1]
 gi|121590401|gb|ABM62981.1| TolB, N-terminal domain protein [Halorhodospira halophila SL1]
          Length = 436

 Score =  347 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 101/443 (22%), Positives = 202/443 (45%), Gaps = 15/443 (3%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV-SIDELGG-KV 65
              L    +   L  L+      S    + +           IA   F  +       ++
Sbjct: 1   MTRLKRVWSTLYLAALLSLPAHASADDDLVIDIIGGIEGATPIAIVPFQRAEGADPETEL 60

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
           + +++ +L R+  F+++ ++         + + RF  W + G   LV G +   G  R  
Sbjct: 61  APIITANLARTGRFDILPEEDLVDTPGRMEDV-RFSTWRAQGVDHLVVGGIDDAGDGRYE 119

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           V F + D    ++  G+++ +     R +AHTISD IY++IT  +G F  RI +V+    
Sbjct: 120 VRFEVLDAFQGQRTDGRRYRAEERHLRTLAHTISDRIYETITDREGTFTKRIAYVAVEQR 179

Query: 186 SGI--IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                 ++ L V D DG   + +  S D+ L  P +SP++ ++AY +++      V++ +
Sbjct: 180 EDGEGRRHRLVVADSDGHRPQTILTS-DEPLLSPAWSPSRDRLAYVSFEGRRS-EVFVQE 237

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R     +R+ +FR +  AP +S +G +  +++ +D A +IY +D+ S     LT+   I
Sbjct: 238 IRTGE-RERVASFRGINSAPAWSPDGDQLAVTLSRDGAANIYLIDVASGDVRPLTDHWAI 296

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +  A++ PD   I F SDR G+ Q+Y    +GS+ +R++ D   +   P  SP G+ +A 
Sbjct: 297 DTEATWGPDGDWIYFTSDRGGRPQIYRTPPDGSETERVTYDGAYNAR-PSISPDGERMAM 355

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 ++ I +   D    +++ +    ++P+++P+G  +I++       G +L +  +
Sbjct: 356 VHRHDGQYYIALQDLDTEAVQIISDGPADESPSFAPNGDLVIYTT--GDTEGQRLATASV 413

Query: 424 NGRNETLINT----PAYASDPQW 442
            G     + +         +P W
Sbjct: 414 IGGAVAPLESTEEPNTRVREPAW 436



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 11/131 (8%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGS 381
             + +L V  S+G   + I    E     P WSP  D +A+  F G +  + V + + G 
Sbjct: 184 GRRHRLVVADSDGHRPQTILTSDE-PLLSPAWSPSRDRLAYVSFEGRRSEVFVQEIRTGE 242

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------P 434
           +ER+        AP WSP G  L  +  +DG   + +Y ID+   +   +          
Sbjct: 243 RERVASFRGINSAPAWSPDGDQLAVTLSRDG--AANIYLIDVASGDVRPLTDHWAIDTEA 300

Query: 435 AYASDPQWVGF 445
            +  D  W+ F
Sbjct: 301 TWGPDGDWIYF 311


>gi|225677115|ref|ZP_03788116.1| translocation protein TolB precursor [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590843|gb|EEH12069.1| translocation protein TolB precursor [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 420

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 146/433 (33%), Positives = 227/433 (52%), Gaps = 26/433 (6%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----IDELGGKVSEVVSKDLQR 75
           L++ I  F P    A + V    ++   + +  +K         EL   +++V+  +L  
Sbjct: 7   LVLFISLFIPYFTKAALYVDIKKSSVGNIGLVVSKCTCKTALESELSENIAKVIGTNLSN 66

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
             +FN+       ++    +S    + W S     +VT  + +     L + FRL+D   
Sbjct: 67  CGLFNV-------KRGAEAES----KSWKS---DTVVTVSLSEISGSALELSFRLFDAFT 112

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLC 194
           +++++ +        WRKI H +SD I+  + GEKG FN++I +++E   S       + 
Sbjct: 113 KRELLTQSVVFPAKDWRKIGHLVSDVIHDRLIGEKGHFNTKITYIAEEKDSNYKSVRKIA 172

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           VM++DG+NI+YLT   D+ +  PRFSPN + + Y +Y +     +  +    D     I 
Sbjct: 173 VMNQDGSNIKYLTNG-DRFVSTPRFSPNGKGIVYISYANGKSYII--LKNLKDNTESIIS 229

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            F  ++ APRFS +GK  LIS       +I S+DL S  T+++T    I+ S S+SPD  
Sbjct: 230 AFEGVVSAPRFSPDGKSLLISHSLGGETNILSLDLSSKRTKKITKGSAISTSPSFSPDQK 289

Query: 315 QIVFESDREGKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            + F SD  G +QLYV+   +     KRIS      Y  PVWSP+GDLIAFTK    KF 
Sbjct: 290 YMAFSSDISGSQQLYVIDFTNKSKKPKRISF-GSGRYATPVWSPKGDLIAFTKIQSGKFY 348

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           IGVMK DG +ERLL E   +++P W P+GR +IF+R +   + SKLY +DL  +N+ +++
Sbjct: 349 IGVMKPDGKEERLLSEGHKIESPAWLPNGREIIFTRTES-PSNSKLYLVDLVKKNQKMVS 407

Query: 433 TPAYASDPQWVGF 445
           TP  AS P W  F
Sbjct: 408 TPTNASLPDWSYF 420


>gi|296107155|ref|YP_003618855.1| TolB colicin import protein [Legionella pneumophila 2300/99 Alcoy]
 gi|295649056|gb|ADG24903.1| TolB colicin import protein [Legionella pneumophila 2300/99 Alcoy]
          Length = 419

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 115/438 (26%), Positives = 192/438 (43%), Gaps = 23/438 (5%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            N  I+L LLL              + +       S + IA   F   D    ++  V+ 
Sbjct: 2   FNRIISLFLLLFTGQVIA-------LDLELTQGINSALPIAINSF-GSDAAAQEIGNVIE 53

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL  S  F +IS           +S         LGA  +VTGRV + G +R+ V F L
Sbjct: 54  NDLTISGQFKIIS------GPQGANSQSSVSTLRQLGADSVVTGRVNQVG-NRIEVSFTL 106

Query: 131 WD-VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            D V +   ++ K F  +    R +AH ISD++YQ +TGE+G F++RI ++S     G  
Sbjct: 107 ADAVANGNILLTKTFQINANQVRALAHHISDEVYQKLTGERGIFSTRIAYISVQRNGGRS 166

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + SL V D DG N + L  S + I   P +SPN + ++Y +++ +    ++ +     + 
Sbjct: 167 RYSLEVADADGHNPQSLLVSSEPI-MSPSWSPNGKSISYVSFEKKKA-EIFTVSVETGQ- 223

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            + I +F  +  AP +S +G+   + + K     IY VDL S + ++LT    I+    Y
Sbjct: 224 RRLITSFPGINGAPAWSPDGRHLAVVLSKSGTPKIYDVDLSSGSMKQLTFGNSIDTEPRY 283

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   ++F S R G  Q+Y +        R++ +   +     ++P    I        
Sbjct: 284 SPDGRSLLFTSGRGGSPQVYRLSLADGQISRVTFEGNYNARA-SYTPDMKHIVMLHREDR 342

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE- 428
           +F IGV    G     L      ++P+ SP+ R ++++ +        + SID  GR   
Sbjct: 343 QFNIGVQNTGGGPISNLTFSGLDESPSVSPNSRLVLYATRYQDRGVLGIVSID--GRIRM 400

Query: 429 TLINTPAYASDPQWVGFM 446
            L        +P W  ++
Sbjct: 401 RLPAREGDVQEPAWSPYL 418


>gi|148262286|ref|YP_001228992.1| WD40 domain-containing protein [Geobacter uraniireducens Rf4]
 gi|146395786|gb|ABQ24419.1| WD40 domain protein beta Propeller [Geobacter uraniireducens Rf4]
          Length = 427

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 119/421 (28%), Positives = 201/421 (47%), Gaps = 15/421 (3%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIA--FTKFVSID-ELGGKVSEVVSKDLQRSDVFNLISQ 84
           F  +   +++V         +++A   + F     ++   +SEV S DL  +  F ++  
Sbjct: 16  FLQAQQGYLEVTAPGNRQMQLAVAQPVSLFGGPSADIAKGISEVFSFDLTLAGPFAVMPT 75

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
              + K         F  W + GA +LV         D L +EFRL+DV   K++  K++
Sbjct: 76  PPAESKSGIRPGEFDFAPWQAAGANLLVKSGYTVSA-DSLTIEFRLYDVARGKELAAKRY 134

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
               A  RKI HT  D+I  ++TGE+G F  +  FVS +  +      +C+MD DG N++
Sbjct: 135 SGKRADLRKIVHTFGDEIMLAVTGERGPFTGKTAFVSTATGN----KEICLMDYDGYNVQ 190

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            LT +   I   P FSPN +++ Y +Y   +                R+     + +   
Sbjct: 191 RLTKNGS-INLNPDFSPNGKELIYTSYKRRNPD--LYRRELFSGTEARLSARPGINVTGA 247

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G +  +++ KD   +IY++        +LTN   I +S ++SPD S+I F SDR G
Sbjct: 248 WSPDGSKIALAMSKDGNSEIYTISKDGKQLAKLTNNSAIEVSPAWSPDGSRIAFVSDRLG 307

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           K Q+++M ++GS+  R++     +   P WSP+GD IA+ +  G  F I V+  DGS + 
Sbjct: 308 KPQVFIMNADGSNVSRLTTSGTYNV-SPRWSPKGDRIAYCRQHGGGFQIYVINADGSSDV 366

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWV 443
            L  + + + P WSP GR + FS  + G     +Y +  +G  +T ++      S P W 
Sbjct: 367 QLTSEGSNEHPRWSPDGRFITFSSTRGGK--EAIYVMRSDGSGQTRVSRGKGADSHPAWS 424

Query: 444 G 444
            
Sbjct: 425 P 425



 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 53/228 (23%), Positives = 99/228 (43%), Gaps = 13/228 (5%)

Query: 135 DRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES----VVSGII 189
           + K++I   +   +P  +R+    +       ++   G   +       S     +S   
Sbjct: 207 NGKELIYTSYKRRNPDLYRR---ELFSGTEARLSARPGINVTGAWSPDGSKIALAMSKDG 263

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            + +  + +DG  +  LT     I   P +SP+  ++A+ +       +V++M+      
Sbjct: 264 NSEIYTISKDGKQLAKLTN-NSAIEVSPAWSPDGSRIAFVSDRLGKP-QVFIMNAD-GSN 320

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             R+    +  ++PR+S  G R     Q      IY ++   ++  +LT+         +
Sbjct: 321 VSRLTTSGTYNVSPRWSPKGDRIAYCRQHGGGFQIYVINADGSSDVQLTSEGSNE-HPRW 379

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           SPD   I F S R GKE +YVM+S+GS Q R+S+ K  +   P WSP+
Sbjct: 380 SPDGRFITFSSTRGGKEAIYVMRSDGSGQTRVSRGK-GADSHPAWSPR 426


>gi|308271861|emb|CBX28469.1| Protein tolB [uncultured Desulfobacterium sp.]
          Length = 450

 Score =  346 bits (887), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 110/457 (24%), Positives = 212/457 (46%), Gaps = 25/457 (5%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID- 59
           M         +       + +  +     TS   +  +  NS +   + IA   F S   
Sbjct: 1   MIRINVKEFLMKYFRLFIVFVAALLTMTGTSFGGYDYIDINSPSIRKMPIAVPLFKSGTG 60

Query: 60  -------ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD---SIPRFQDWNSLGAQ 109
                  +L  K S+++S  L  +  F ++ ++SF + +  P+       F++W ++GA+
Sbjct: 61  TLKNGDMQLPKKASDMLSGMLDFTGYFKILDRESFLENLLKPETTLQTVDFRNWTTVGAE 120

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           +LVTG +   G D L +E RL+D     Q++GKK+       R I    + +I   +TG 
Sbjct: 121 LLVTGTIQANGND-LEIEMRLFDTVKANQLVGKKYKGGVNDLRHILRLFASEIVFCLTGN 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F++RI FVS    +G  K  + + D DG N+R  T +   I   P +S + Q +AY 
Sbjct: 180 RGVFDTRIAFVS----TGSGKKEIYICDFDGTNVRQFTKNNS-ITLFPAWSSDGQWIAYT 234

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +Y  +    +Y+ +   +     + + + + + P +         ++      DIY +  
Sbjct: 235 SY-LKGNPDLYIKNVSNNSIS--VVSKKGINITPSWMPGKFELAATLSFSGDQDIYLMTG 291

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                ++LTN+   ++S ++SPD  ++ F S R G  Q+Y+   +  +++R++ +   + 
Sbjct: 292 TGKIIKKLTNSTGSDVSPTFSPDGKKMAFVSSRSGTPQIYIQDISTGNEQRLTFNGRYN- 350

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSR 408
             P WSP+G+ I ++   G K  I ++  DG     L  +  + ++P WSP G  ++FS 
Sbjct: 351 TQPCWSPKGNKIVYSGLDGGKHNIFIIALDGKDPVQLTHNEGDNESPFWSPDGSLIVFSS 410

Query: 409 KKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            ++G   S++Y +   G ++  L +     S+P+W  
Sbjct: 411 TREGP--SRIYVMTSYGTDQKRLFSISGEQSNPKWSP 445


>gi|54294385|ref|YP_126800.1| TolB protein [Legionella pneumophila str. Lens]
 gi|67461924|sp|Q5WWJ9|TOLB_LEGPL RecName: Full=Protein tolB; Flags: Precursor
 gi|53754217|emb|CAH15694.1| TolB protein [Legionella pneumophila str. Lens]
 gi|307610269|emb|CBW99833.1| TolB protein [Legionella pneumophila 130b]
          Length = 419

 Score =  346 bits (887), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 115/438 (26%), Positives = 192/438 (43%), Gaps = 23/438 (5%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            N  I+L LLL              + +       S + IA   F   D    ++  V+ 
Sbjct: 2   FNRIISLFLLLFTGQVIA-------LDLELTQGINSALPIAINSF-GSDAAAQEIGNVIE 53

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL  S  F +IS           +S         LGA  +VTGRV + G +R+ V F L
Sbjct: 54  NDLTISGQFKIIS------GPQGANSQSSVSTLRQLGADSVVTGRVNQVG-NRIEVSFTL 106

Query: 131 WD-VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            D V +   ++ K F  +    R +AH ISD++YQ +TGE+G F++RI ++S     G  
Sbjct: 107 ADAVANGNILLTKTFQINANQVRALAHHISDEVYQKLTGERGIFSTRIAYISVQRAGGRS 166

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + SL V D DG N + L  S + I   P +SPN + ++Y +++ +    ++ +     + 
Sbjct: 167 RYSLEVADADGHNPQSLLVSSEPI-MSPSWSPNGKSISYVSFEKKKA-EIFTVSVETGQ- 223

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            + I +F  +  AP +S +G+   + + K     IY VDL S + ++LT    I+    Y
Sbjct: 224 RRLITSFPGINGAPAWSPDGQHLAVVLSKSGTPKIYDVDLSSGSMKQLTFGNSIDTEPRY 283

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   ++F S R G  Q+Y +        R++ +   +     ++P    I        
Sbjct: 284 SPDGRSLLFTSGRGGSPQVYRLSLADGQISRVTFEGNYNARA-SYTPDMKHIVMLHREDR 342

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE- 428
           +F IGV    G     L      ++P+ SP+ R ++++ +        + SID  GR   
Sbjct: 343 QFNIGVQNTGGGPISNLTFSGLDESPSVSPNSRLVLYATRYQDRGVLGIVSID--GRIRM 400

Query: 429 TLINTPAYASDPQWVGFM 446
            L        +P W  ++
Sbjct: 401 RLPAREGDVQEPAWSPYL 418


>gi|52841801|ref|YP_095600.1| TolB colicin import protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|67461928|sp|Q5ZV69|TOLB_LEGPH RecName: Full=Protein tolB; Flags: Precursor
 gi|52628912|gb|AAU27653.1| TolB colicin import protein [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 419

 Score =  345 bits (886), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 114/438 (26%), Positives = 192/438 (43%), Gaps = 23/438 (5%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            N  I+L LLL              + +       S + IA   F   +    ++  V+ 
Sbjct: 2   FNRIISLFLLLFTGQVIA-------LDLELTQGINSALPIAINSF-GSNAAAQEIGNVIE 53

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL  S  F +IS           +S         LGA  +VTGRV + G +R+ V F L
Sbjct: 54  NDLTISGQFKIIS------GPQGANSQSSVSTLRQLGADSVVTGRVNQVG-NRIEVSFTL 106

Query: 131 WD-VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            D V +   ++ K F  +    R +AH ISD++YQ +TGE+G F++RI ++S     G  
Sbjct: 107 ADAVANGNILLTKTFQINANQVRALAHHISDEVYQKLTGERGIFSTRIAYISVQRNGGRS 166

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + SL V D DG N + L  S + I   P +SPN + ++Y +++ +    ++ +     + 
Sbjct: 167 RYSLEVADADGHNPQSLLVSSEPI-MSPSWSPNGKSISYVSFEKKKA-EIFTVSVETGQ- 223

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            + I +F  +  AP +S +G+   + + K     IY VDL S + ++LT    I+    Y
Sbjct: 224 RRLITSFPGINGAPAWSPDGQHLAVVLSKSGTPKIYDVDLSSGSMKQLTFGNSIDTEPRY 283

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   ++F S R G  Q+Y +        R++ +   +     ++P    I        
Sbjct: 284 SPDGRSLLFTSGRGGSPQVYRLSLADGQISRVTFEGNYNARA-SYTPDMKHIVMLHREDR 342

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE- 428
           +F IGV    G     L      ++P+ SP+ R ++++ +        + SID  GR   
Sbjct: 343 QFNIGVQNTGGGPISNLTFSGLDESPSVSPNSRLVLYATRYQDRGVLGIVSID--GRIRM 400

Query: 429 TLINTPAYASDPQWVGFM 446
            L        +P W  ++
Sbjct: 401 RLPAREGDVQEPAWSPYL 418


>gi|58040119|ref|YP_192083.1| translocation protein TolB [Gluconobacter oxydans 621H]
 gi|67461870|sp|Q5FQB9|TOLB_GLUOX RecName: Full=Protein tolB; Flags: Precursor
 gi|58002533|gb|AAW61427.1| TolB protein [Gluconobacter oxydans 621H]
          Length = 453

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 153/435 (35%), Positives = 225/435 (51%), Gaps = 20/435 (4%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
            L   L         S     ++  + A   P+ I    F +   LG ++S V++ DL  
Sbjct: 30  LLATPLAAFAQSGAASGPGEAEITVDQARQEPIPIVVPNFGAG--LGEQISGVITSDLNG 87

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           + +F ++S          P S P F    + GA+          G   +RVE RLWDV  
Sbjct: 88  TGLFKVMSGS------VPPGSTPDFSALKAQGARA--AVAGQAVGAGSVRVEMRLWDVLS 139

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            +Q+ G  + +S ++WR+IAH I+D IY+ + GEKG F++RI +++ +         L +
Sbjct: 140 GQQLQGTAYTASNSNWRRIAHIIADVIYERMLGEKGYFDTRIAYIARTGPRHHQITRLAL 199

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           MD+DGAN R LT   + +   PRF+P + ++A+ +Y +    RVYL D    R  + +G 
Sbjct: 200 MDQDGANERMLT-GGEWLTLTPRFNPVRDQIAFMSYANNRP-RVYLFDLASGRQ-QILGE 256

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSS 314
           F  +  APRFS  G   ++S  +    DI+ VDL S A  ++TN+   I+ S  +SPD S
Sbjct: 257 FAGISFAPRFSPTGGSVVLSATRGGGSDIFVVDLASRAKRQITNSNGAIDTSPCFSPDGS 316

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           QIVF SDR G  QLY+M ++G   KRIS      Y  PVWSP+GDLIAFT+     F++G
Sbjct: 317 QIVFNSDRGGSPQLYIMSASGGAAKRISY-GSGQYGSPVWSPRGDLIAFTRIGSGGFSLG 375

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-----KDGDTGSKLYSIDLNGRNET 429
           VM  DG+ ER+L +   +   T+ P+GR L F R+           S + +ID+ G NE 
Sbjct: 376 VMNPDGTGERILTQGFTVDGATFCPNGRVLAFCRQSASGAGGAGFASGIGTIDITGFNER 435

Query: 430 LINTPAYASDPQWVG 444
            I     ASDP W  
Sbjct: 436 PIRISTGASDPAWSP 450


>gi|169632714|ref|YP_001706450.1| tolerance to colicins E2, E, A, and K, required for OM integrity
           [Acinetobacter baumannii SDF]
 gi|169795058|ref|YP_001712851.1| tolerance to colicins E2, E, A, and K, required for OM integrity
           [Acinetobacter baumannii AYE]
 gi|184159156|ref|YP_001847495.1| translocation protein TolB [Acinetobacter baumannii ACICU]
 gi|213158279|ref|YP_002320330.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii AB0057]
 gi|215482607|ref|YP_002324799.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii AB307-0294]
 gi|239501026|ref|ZP_04660336.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii AB900]
 gi|301346653|ref|ZP_07227394.1| translocation protein TolB [Acinetobacter baumannii AB056]
 gi|301596452|ref|ZP_07241460.1| translocation protein TolB [Acinetobacter baumannii AB059]
 gi|332869633|ref|ZP_08438844.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii 6013113]
 gi|332875984|ref|ZP_08443770.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii 6014059]
 gi|169147985|emb|CAM85848.1| tolerance to colicins E2, E, A, and K, required for OM integrity
           [Acinetobacter baumannii AYE]
 gi|169151506|emb|CAP00269.1| tolerance to colicins E2, E, A, and K, required for OM integrity
           [Acinetobacter baumannii]
 gi|183210750|gb|ACC58148.1| Periplasmic component of the Tol biopolymer transport system
           [Acinetobacter baumannii ACICU]
 gi|213057439|gb|ACJ42341.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii AB0057]
 gi|213987558|gb|ACJ57857.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii AB307-0294]
 gi|322509069|gb|ADX04523.1| tolB [Acinetobacter baumannii 1656-2]
 gi|323519050|gb|ADX93431.1| translocation protein TolB [Acinetobacter baumannii TCDC-AB0715]
 gi|332732680|gb|EGJ63912.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii 6013113]
 gi|332735850|gb|EGJ66891.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii 6014059]
          Length = 426

 Score =  343 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 102/422 (24%), Positives = 192/422 (45%), Gaps = 16/422 (3%)

Query: 25  GGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ 84
               PT+  A + +    A      IA   F + + L      +V  DL RS  F   S+
Sbjct: 18  SPLAPTAAFAQLHLEIAKAPDQAPKIAIVPFNNDNGL----YPIVETDLNRSGRFTSSSK 73

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
           +          +  +  DW + G   +VTG++ +       V ++L+DV+ ++ ++ +  
Sbjct: 74  NL---PANAAINQIQASDWQAAGIPYVVTGQIKQTADG-FEVHYQLYDVQKQQYLLNELL 129

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
               +  R+  H +SD IYQ++TG  GDF+ RI +V  +  +   + +L + D DG   +
Sbjct: 130 NVPASRIRQAGHMVSDAIYQALTGIPGDFSGRIAYVLRNPATPAERYTLQIADTDGEQPK 189

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +  SRD I   P ++P+ +K+AY +++ +    +YL D       + + +F+ +  AP 
Sbjct: 190 TVLSSRDPI-LSPAWTPDAKKIAYVSFETKRPA-IYLQDLSTGT-REVLTSFKGLNGAPS 246

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK  L +   +   +IY +DL +   +R+TN   I+  A Y+PD    +F SDR G
Sbjct: 247 FSPDGKSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSGIDTEARYTPDGKAFIFTSDRGG 306

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQE 383
             Q+Y         KR++     +      S  G  IA     SG  + + +   +    
Sbjct: 307 SPQIYRYDFGNGSVKRLTFKGSFNARG-TLSADGKKIALVHRPSGSNYKVAIQDINTGIV 365

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQW 442
            +L   S  ++P++SP+G+ ++++ ++       +  +  +GR    L +      +P W
Sbjct: 366 NILTPTSLDESPSFSPNGQMVVYATREGNRGLLSI--MSTDGRFRMNLPSEQGEVREPAW 423

Query: 443 VG 444
             
Sbjct: 424 AP 425


>gi|260556542|ref|ZP_05828760.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii ATCC 19606]
 gi|260409801|gb|EEX03101.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii ATCC 19606]
          Length = 426

 Score =  343 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 103/422 (24%), Positives = 192/422 (45%), Gaps = 16/422 (3%)

Query: 25  GGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ 84
               PT+  A + +    A      IA   F + + L      +V  DL RS  F   S+
Sbjct: 18  SPLAPTAAFAQLHLEIAKAPDQAPKIAIVPFNNDNGL----YPIVETDLNRSGRFTSSSK 73

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
           +          +  +  DW + G   +VTG++ +       V ++L+DV+ ++ ++ +  
Sbjct: 74  NL---PANAAINQIQASDWQAAGIPYVVTGQIKQTADG-FEVHYQLYDVQKQQYLLNELL 129

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
               +  R+  H +SD IYQ++TG  GDF+ RI +V  +  +   + +L + D DG   +
Sbjct: 130 NVPASRIRQAGHMVSDAIYQALTGIPGDFSGRIAYVLRNPATPAERYTLQIADTDGEQPK 189

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +  SRD I   P ++P+ +K+AY +++ +    +YL D       + I +F+ +  AP 
Sbjct: 190 TVLSSRDPI-LSPAWTPDAKKIAYVSFETKRPA-IYLQDLSTGT-REVITSFKGLNGAPS 246

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK  L +   +   +IY +DL +   +R+TN   I+  A Y+PD    +F SDR G
Sbjct: 247 FSPDGKSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSGIDTEARYTPDGKAFIFTSDRGG 306

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQE 383
             Q+Y         KR++     +      S  G  IA     SG  + + +   +    
Sbjct: 307 SPQIYRYDFGNGSVKRLTFKGSFNARG-TLSADGKKIALVHRPSGSNYKVAIQDINTGIV 365

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQW 442
            +L   S  ++P++SP+G+ ++++ ++       +  +  +GR    L +      +P W
Sbjct: 366 NILTPTSLDESPSFSPNGQMVVYATREGNRGLLSI--MSTDGRFRMNLPSEQGEVREPAW 423

Query: 443 VG 444
             
Sbjct: 424 AP 425


>gi|299769115|ref|YP_003731141.1| translocation protein TolB [Acinetobacter sp. DR1]
 gi|298699203|gb|ADI89768.1| translocation protein TolB [Acinetobacter sp. DR1]
          Length = 426

 Score =  343 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 108/439 (24%), Positives = 199/439 (45%), Gaps = 19/439 (4%)

Query: 11  LNMKINLCLLLVLIGGF---FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
           +N      L L LI       PT+  A + +    A      IA   F + + L    S 
Sbjct: 1   MNTSRKHLLSLALITALSPVAPTTAFAQLYLEIAKAPDQAPKIAIVPFNNDNGL----SP 56

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +V  DL RS  F   S++          +  +  DW + G   +VTG++ +       V 
Sbjct: 57  IVETDLNRSGRFTSSSKNL---PANAAINQIQASDWQAAGIPYVVTGQIKQTATG-FEVH 112

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           ++L+DV+ ++ I+ +      +  R+  H +SD IYQ++TG  GDF+ RI +V  +  + 
Sbjct: 113 YQLYDVQKQQYILNELLNVPASRIRQAGHMVSDAIYQALTGIPGDFSGRIAYVLRNPATA 172

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             + +L + D DG   + +  SRD I   P ++P+ +K+AY +++ +    +YL D    
Sbjct: 173 AERYTLQIADTDGEQPKTVLSSRDPI-LSPAWTPDAKKIAYVSFETKRPA-IYLQDLSTG 230

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              + + +F+ +  AP FS +G+  L +   +   +IY +DL +   +R+TN   I+  A
Sbjct: 231 T-REVLTSFKGLNGAPSFSPDGQSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSAIDTEA 289

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
            Y+PD    +F SDR G  Q+Y         KR++     +      S  G  IA     
Sbjct: 290 RYTPDGKSFIFTSDRGGSAQIYRYTFADGSVKRLTFKGSFNARG-TLSADGKKIALVHRP 348

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           SG  + + +   +     +L   S  ++P++SP+G+ ++++ ++       +  +  +GR
Sbjct: 349 SGSSYKVAIQDINTGITNILTPTSLDESPSFSPNGQMVVYATREGNRGLLSI--MSTDGR 406

Query: 427 NE-TLINTPAYASDPQWVG 444
               L +      +P W  
Sbjct: 407 FRMNLPSEQGEVREPAWAP 425


>gi|262373122|ref|ZP_06066401.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           junii SH205]
 gi|262313147|gb|EEY94232.1| tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           junii SH205]
          Length = 427

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 103/437 (23%), Positives = 195/437 (44%), Gaps = 17/437 (3%)

Query: 12  NMKINLCLLLVLIGG--FFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV 69
             + +L  L V          +  A + +    A      IA   F + +     +  +V
Sbjct: 3   KTRKSLLALAVFTALSTVVSGTAFAQLHLEIAKAPEQAPKIAIIPFTNDNA----IYPIV 58

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
             DL RS  F   S++      +   +  +  DW + G   +V G++     +   V ++
Sbjct: 59  ENDLNRSGRFTSASRNL---PASASLNQIQASDWQNAGVPYVVVGQIKSINANSFEVHYQ 115

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+DV+ ++ ++ +      +  R+  H ISD IYQ++TG  GDF+ RI +V  +  +   
Sbjct: 116 LYDVQKQQYLLNEVLTVPNSRIRQAGHMISDAIYQALTGIAGDFSGRIAYVLRNQATPAQ 175

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L + D DG   + +  SRD I   P +SP+ +K+AY +++ +    +YL D    + 
Sbjct: 176 RYTLQIADTDGEQPKTVLSSRDPI-LSPTWSPDAKKIAYVSFETKRPA-IYLQDLATGQ- 232

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            + + +FR +  AP FS +G+  L +       +IY ++L +   +R+TN   I+  A Y
Sbjct: 233 REVLASFRGLNGAPSFSPDGQSMLFTASMHGNPEIYQMNLNTRQVKRMTNDSAIDTEARY 292

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SG 368
           +PD    +F SDR G  Q+Y         KR++    A       S  G  IA     SG
Sbjct: 293 APDGKSFIFTSDRGGSPQIYRYSFEDGSVKRLTFKG-AFNARGTLSADGKKIALVHRPSG 351

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             + + +   +     +L   S  ++P++SP+G+ ++++ ++       +  +  +GR  
Sbjct: 352 SSYKVALQDINTGITNILTPTSLDESPSFSPNGQMVVYATREGNRGLLSI--MSTDGRFR 409

Query: 429 -TLINTPAYASDPQWVG 444
             L +      +P W  
Sbjct: 410 MNLPSEQGEVREPAWAP 426


>gi|193078076|gb|ABO13011.2| tolerance to colicins E2 E, A, and K [Acinetobacter baumannii ATCC
           17978]
          Length = 426

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 102/422 (24%), Positives = 192/422 (45%), Gaps = 16/422 (3%)

Query: 25  GGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ 84
               PT+  A + +    A      IA   F + + L      +V  DL RS  F   S+
Sbjct: 18  SPLAPTAAFAQLHLEIAKAPDQAPKIAIVPFNNDNGL----YPIVETDLNRSGRFTSSSK 73

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
           +          +  +  DW + G   +VTG++ +       V ++L+DV+ ++ ++ +  
Sbjct: 74  NL---PANAAINQIQASDWQAAGIPYVVTGQIKQTADG-FEVHYQLYDVQKQQYLLNELL 129

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
               +  R+  H +SD IYQ++TG  GDF+ RI +V  +  +   + +L + D DG   +
Sbjct: 130 NVPASRIRQAGHIVSDAIYQALTGIPGDFSGRIAYVLRNPATPAERYTLQIADTDGEQPK 189

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +  SRD I   P ++P+ +K+AY +++ +    +YL D       + + +F+ +  AP 
Sbjct: 190 TVLSSRDPI-LSPAWTPDAKKIAYVSFETKRPA-IYLQDLSTGT-REVLTSFKGLNGAPS 246

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK  L +   +   +IY +DL +   +R+TN   I+  A Y+PD    +F SDR G
Sbjct: 247 FSPDGKSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSGIDTEARYTPDGKAFIFTSDRGG 306

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQE 383
             Q+Y         KR++     +      S  G  IA     SG  + + +   +    
Sbjct: 307 SPQIYRYDFGNGSVKRLTFKGSFNARG-TLSADGKKIALVHRPSGSNYKVAIQDINTGIV 365

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQW 442
            +L   S  ++P++SP+G+ ++++ ++       +  +  +GR    L +      +P W
Sbjct: 366 NILTPTSLDESPSFSPNGQMVVYATREGNRGLLSI--MSTDGRFRMNLPSEQGEVREPAW 423

Query: 443 VG 444
             
Sbjct: 424 AP 425


>gi|258591276|emb|CBE67573.1| Protein tolB precursor [NC10 bacterium 'Dutch sediment']
          Length = 450

 Score =  343 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 118/448 (26%), Positives = 215/448 (47%), Gaps = 24/448 (5%)

Query: 11  LNMKINLC---LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS------IDEL 61
           ++++  +    LL++ I      S      V         ++IA   F S       ++L
Sbjct: 1   MSIRRAIFAFGLLVITIPPLSALSAEEKYTVDIVRKEAQKITIAVVGFPSLKAISKGEDL 60

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFK---QKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
           G +   +++ DL+ + +F++I          ++            NSL  Q +V G++  
Sbjct: 61  GAQAGAILTDDLKNTGIFDVIDPSFLPVEAAQVGFGQEKGLLPALNSLKVQAVVVGKLSS 120

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
            G D L VE +L++V + + + GK++   P + R + H ++D+I   +TGEKG  +S+I 
Sbjct: 121 RG-DELVVEGQLFEVTNGEMLSGKRYAGDPRTLRAMVHRLADEIVFRLTGEKGIASSKIA 179

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +VS    S      + VMD D  N   +T     I   PR+SP+ +K+AY +Y D +   
Sbjct: 180 YVS----SVNGAKEIYVMDYDAYNPLLIT-GNHSINLSPRWSPDGKKIAYTSYRDHNP-D 233

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++++D    R  ++I +   + +AP +S NGK  + S+      +++ +   +    +LT
Sbjct: 234 LFVVDLETGR-RQKISSNPGLNVAPAWSPNGKWLVFSMSSGTGTNLFLIRPDATGLRQLT 292

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               I+IS S++P+  QIVF SDR G  Q+Y+M   G++ +R++         P WSP+G
Sbjct: 293 QGPHIDISPSFAPNGRQIVFSSDRGGTPQIYLMDVEGTNIRRLTFGVGDYSVSPRWSPRG 352

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           D I F   +   F I ++  DG+    L  +S N + P+WS  GR L+F+  ++G     
Sbjct: 353 DKITFVGRTRGSFDIFLINPDGTGLTQLTSNSRNNEEPSWSADGRHLLFTSTRNGHR--H 410

Query: 418 LYSIDLNGRNETLINTPAYASD-PQWVG 444
           LY +  +G ++  +      +    W  
Sbjct: 411 LYVMKADGSDQRQLTKNGQENYLADWSP 438



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 42/94 (44%), Gaps = 10/94 (10%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKL 418
            IA+         I VM  D     L+  + ++  +P WSP G+ + ++  +  D    L
Sbjct: 177 KIAYVSSVNGAKEIYVMDYDAYNPLLITGNHSINLSPRWSPDGKKIAYTSYR--DHNPDL 234

Query: 419 YSIDL-NGRNETLINTPA------YASDPQWVGF 445
           + +DL  GR + + + P       ++ + +W+ F
Sbjct: 235 FVVDLETGRRQKISSNPGLNVAPAWSPNGKWLVF 268


>gi|262278152|ref|ZP_06055937.1| tolerance protein to colicins E2 [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258503|gb|EEY77236.1| tolerance protein to colicins E2 [Acinetobacter calcoaceticus
           RUH2202]
          Length = 426

 Score =  343 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 108/439 (24%), Positives = 199/439 (45%), Gaps = 19/439 (4%)

Query: 11  LNMKINLCLLLVLIGGFFP---TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
           +N      L L LI    P   T+  A + +    A      IA   F + + L    S 
Sbjct: 1   MNTSRKHLLSLALITALSPLASTTAFAQLYLEIAKAPDQAPKIAIVPFNNDNGL----SP 56

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +V  DL RS  F   S++          +  +  DW + G   +VTG++ +       V 
Sbjct: 57  IVETDLNRSGRFTSSSKNL---PANAAINQIQASDWQAAGIPYVVTGQIKQTATG-FEVH 112

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           ++L+DV+ ++ I+ +      +  R+  H +SD IYQ++TG  GDF+ RI +V  +  + 
Sbjct: 113 YQLYDVQKQQYILNELLNVPASRIRQAGHMVSDSIYQALTGIPGDFSGRIAYVLRNPATP 172

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             + +L + D DG   + +  SRD I   P ++P+ +K+AY +++ +    +YL D    
Sbjct: 173 AERYTLQIADTDGEQPKTVLSSRDPI-LSPAWTPDAKKIAYVSFETKRPA-IYLQDLSTG 230

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              + + +F+ +  AP FS +G+  L +   +   +IY +DL +   +R+TN   I+  A
Sbjct: 231 T-REVLTSFKGLNGAPSFSPDGQSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSAIDTEA 289

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
            Y+PD    +F SDR G  Q+Y         KR++     +      S  G  IA     
Sbjct: 290 RYTPDGKSFIFTSDRGGSAQIYRYTFADGSVKRLTFKGSFNARG-TLSADGKKIALVHRP 348

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           SG  + + +   +     +L   S  ++P++SP+G+ ++++ ++       +  +  +GR
Sbjct: 349 SGSSYKVAIQDINTGITNILTPTSLDESPSFSPNGQMVVYATREGNRGLLSI--MSTDGR 406

Query: 427 NE-TLINTPAYASDPQWVG 444
               L +      +P W  
Sbjct: 407 FRMNLPSEQGEVREPAWAP 425


>gi|15602832|ref|NP_245904.1| translocation protein TolB [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|32699718|sp|Q9CM71|TOLB_PASMU RecName: Full=Protein tolB; Flags: Precursor
 gi|12721292|gb|AAK03051.1| TolB [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 432

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 98/444 (22%), Positives = 187/444 (42%), Gaps = 22/444 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEV 68
           + +   +  +L++          A V++  +    +  P+++   K+         ++++
Sbjct: 1   MKLVTRMWSILIVFFLAVLQPAQAEVRIVIDEGVDSARPIAVVPFKWNGPGSAPADIADI 60

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           ++ DL+ S  FN I  +   Q  T+   +   + W +LG   +V G V         + +
Sbjct: 61  IAADLRHSGKFNPIPVNRMPQHPTSVSEV-NPEAWAALGIDAVVVGHVTP-ANGSFNIAY 118

Query: 129 RLWDV-----KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           +L D           +   ++  +    R  AHT+SD++++ +TG +G F +RI ++ + 
Sbjct: 119 QLVDTIGATGTAGTVLTQNQYTVTAKWLRYGAHTVSDEVFEKLTGIRGAFRTRIAYIVQK 178

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              G     + V D DG N +++     Q L  P +S + +K+AY +++++    V  + 
Sbjct: 179 -HGGSQPYEVRVSDYDGFN-QFVVNRSAQPLMSPAWSHDGKKLAYVSFENKKSQLV--VQ 234

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                A K + +F     AP FS +G R   +  KD  ++IY ++L S    +LT+    
Sbjct: 235 DLGSGARKVVASFNGHNGAPAFSPDGSRLAFASSKDGVLNIYVMNLGSGQISQLTSGTGN 294

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N   S+SPD   IVF SDR G  Q+Y M ++G     +S    +  +    +  G  I  
Sbjct: 295 NTEPSWSPDGQTIVFTSDRSGSPQVYQMSASGGGASLVSTGGRS--YSGQMTADGSAIIM 352

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                    I           +L      + P+ SP+G  +I+S  +    G  L  +  
Sbjct: 353 ISRD----NIVKKDLASGSTEVLSSTFLDENPSISPNGIMIIYSSTQG--LGKVLQLVSA 406

Query: 424 NGRNE-TLINTPAYASDPQWVGFM 446
           +GR +  L         P W  ++
Sbjct: 407 DGRFKARLPGNDGQVKFPAWSPYL 430


>gi|255020130|ref|ZP_05292200.1| tolB protein precursor, periplasmic protein involved in the
           tonb-independent uptake of group A colicins
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970423|gb|EET27915.1| tolB protein precursor, periplasmic protein involved in the
           tonb-independent uptake of group A colicins
           [Acidithiobacillus caldus ATCC 51756]
          Length = 424

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 116/434 (26%), Positives = 213/434 (49%), Gaps = 12/434 (2%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +  ++ + LL   +G F+  +  A + V    +  S + IA   F         V++V+ 
Sbjct: 1   MARRLWILLLTFGLGFFWNPAAQAALTVDVTKSVSSALPIAIPSFGPGLPGQPSVADVIR 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL  S +F +++  S+      P  + +   W+ +GA  L  G   KE      V+  +
Sbjct: 61  SDLSHSGLFRVLAPGSYPGDPHQPIEV-KASSWSGIGATGLAIGDTQKEANGNYVVQVYV 119

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           ++V+  +++  +++  SPA     AH ++D IY++ TG+ G F +RI +V +       +
Sbjct: 120 YNVQTGQELAARRYTCSPAELHMTAHHVADLIYKTFTGKAGPFAARIAYVRQIGN----E 175

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L V + DG N   +   R  + F P +SP+ +++AY TY D   + +Y+ D    +  
Sbjct: 176 YTLLVAESDGWNPHPVVRGRMPV-FSPVWSPDNRRLAYVTYHDARAI-IYVQDLATGQ-R 232

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + +     ++ AP FS +G+    +  +  A +I+ VDL +    +LT+   IN S S++
Sbjct: 233 QAVAPAGEIVSAPAFSPDGRELAYARAEGGATNIFVVDLATGQRRQLTHGSAINTSPSWA 292

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +VF SDR G  Q+Y M S+G D  R++     +   PV+SP G  IAF   +   
Sbjct: 293 PDGRHLVFVSDRAGSPQIYSMDSDGGDVHRLTFSGNYNA-SPVYSPTGQDIAFIHRTDGV 351

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +A+ VM+ DGS  R+L    N   P+++ +G+ +++  ++ G     L    ++G+   +
Sbjct: 352 YALAVMRADGSGMRVLDAQGNCDHPSFAGNGQMILYGTQRGGRK--VLAEASVDGKTLAV 409

Query: 431 I-NTPAYASDPQWV 443
           +  T    S P W 
Sbjct: 410 LRGTAGEDSQPAWS 423



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 5/136 (3%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P +++I +      +  L V +S+G +   + +      F PVWSP    +A+  +   +
Sbjct: 161 PFAARIAYVRQIGNEYTLLVAESDGWNPHPVVR-GRMPVFSPVWSPDNRRLAYVTYHDAR 219

Query: 371 FAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNE 428
             I V      Q + +      + AP +SP GR L ++R + G T   ++ +DL  G+  
Sbjct: 220 AIIYVQDLATGQRQAVAPAGEIVSAPAFSPDGRELAYARAEGGATN--IFVVDLATGQRR 277

Query: 429 TLINTPAYASDPQWVG 444
            L +  A  + P W  
Sbjct: 278 QLTHGSAINTSPSWAP 293


>gi|260551455|ref|ZP_05825639.1| tolerance to colicins E2 [Acinetobacter sp. RUH2624]
 gi|260405449|gb|EEW98942.1| tolerance to colicins E2 [Acinetobacter sp. RUH2624]
          Length = 426

 Score =  342 bits (878), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 102/422 (24%), Positives = 191/422 (45%), Gaps = 16/422 (3%)

Query: 25  GGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ 84
               PT+  A + +    A      IA   F + + L      +V  DL RS  F   S+
Sbjct: 18  SPLAPTAAFAQLHLEIAKAPDQAPKIAIVPFNNDNGL----YPIVETDLNRSGRFTSSSK 73

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
           +          +  +  DW   G   +VTG++ +       V ++L+DV+ ++ ++ +  
Sbjct: 74  NL---PANAAINQIQASDWQVAGIPYVVTGQIKQTADG-FEVHYQLYDVQKQQYLLNELL 129

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
               +  R+  H +SD IYQ++TG  GDF+ RI +V  +  +   + +L + D DG   +
Sbjct: 130 NVPASRIRQAGHMVSDAIYQALTGIPGDFSGRIAYVLRNPATPAERYTLQIADTDGEQPK 189

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +  SRD I   P ++P+ +K+AY +++ +    +YL D       + + +F+ +  AP 
Sbjct: 190 TVLSSRDPI-LSPAWTPDAKKIAYVSFETKRPA-IYLQDLSTGT-REVLTSFKGLNGAPS 246

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK  L +   +   +IY +DL +   +R+TN   I+  A Y+PD    +F SDR G
Sbjct: 247 FSPDGKSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSGIDTEARYTPDGKAFIFTSDRGG 306

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQE 383
             Q+Y         KR++     +      S  G  IA     SG  + + +   +    
Sbjct: 307 SPQIYRYDFGDGSVKRLTFKGSFNARG-TLSADGKKIALVHRPSGSNYKVAIQDINTGIV 365

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQW 442
            +L   S  ++P++SP+G+ ++++ ++       +  +  +GR    L +      +P W
Sbjct: 366 NILTPTSLDESPSFSPNGQMVVYATREGNRGLLSI--MSTDGRFRMNLPSEQGEVREPAW 423

Query: 443 VG 444
             
Sbjct: 424 AP 425


>gi|293609864|ref|ZP_06692166.1| hypothetical protein HMPREF0013_02014 [Acinetobacter sp. SH024]
 gi|292828316|gb|EFF86679.1| hypothetical protein HMPREF0013_02014 [Acinetobacter sp. SH024]
 gi|325123092|gb|ADY82615.1| tolerance to colicins E2, E, A, and K, required for OM integrity
           [Acinetobacter calcoaceticus PHEA-2]
          Length = 426

 Score =  342 bits (877), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 109/439 (24%), Positives = 198/439 (45%), Gaps = 19/439 (4%)

Query: 11  LNMKINLCLLLVLIGGFFP---TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
           +N      L L LI    P   T+  A + +    A      IA   F + + L      
Sbjct: 1   MNTSRKHLLSLALITALSPIASTTAFAQLYLEIAKAPDQAPKIAIVPFTNDNGL----YP 56

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +V  DL RS  F   S++          +  +  DW + G   +VTG++ +       V 
Sbjct: 57  IVETDLNRSGRFTSSSKNL---PANAAINQIQASDWQAAGIPYVVTGQIKQTATG-FEVH 112

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           ++L+DV+ ++ I+ +      A  R+  H +SD IYQ++TG  GDF+ RI +V  +  + 
Sbjct: 113 YQLYDVQKQQYILNELLNVPAARIRQAGHMVSDAIYQALTGIPGDFSGRIAYVLRNPATP 172

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             + +L + D DG   + +  SRD I   P ++P+ +K+AY +++ +    +YL D    
Sbjct: 173 AERYTLQIADTDGEQPKTVLSSRDPI-LSPAWTPDAKKIAYVSFETKRPA-IYLQDLSTG 230

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              + + +FR +  AP FS +G+  L +   +   +IY +DL +   +R+TN   I+  A
Sbjct: 231 T-REVLTSFRGLNGAPSFSPDGQSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSAIDTEA 289

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
            Y+PD    +F SDR G  Q+Y         KR++     +      S  G  IA     
Sbjct: 290 RYTPDGKSFIFTSDRGGSAQIYRYTFADGSVKRLTFKGSFNARG-TLSADGKKIALVHRP 348

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           SG  + + +   +     +L   S  ++P++SP+G+ ++++ ++       +  +  +GR
Sbjct: 349 SGSSYKVAIQDINTGITNILTPTSLDESPSFSPNGQMVVYATREGNRGLLSI--MSTDGR 406

Query: 427 NE-TLINTPAYASDPQWVG 444
               L +      +P W  
Sbjct: 407 FRMNLPSEQGEVREPAWAP 425


>gi|213649746|ref|ZP_03379799.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
          Length = 373

 Score =  342 bits (877), Expect = 8e-92,   Method: Composition-based stats.
 Identities = 91/381 (23%), Positives = 171/381 (44%), Gaps = 11/381 (2%)

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           ++ DL+ S  FN + +    Q+      + +   W++LG   ++ G V         V +
Sbjct: 1   MAADLRNSGKFNPLDRSRLPQQPATAQEV-QPTAWSALGIDAVIVGLVTPNPDGSYNVAY 59

Query: 129 RLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D        +    +  +    R   HT SD++++ +TG KG F +RI +V ++   
Sbjct: 60  QLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-G 118

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     L V D DG N +++     Q L  P +SP+  K+AY T++        ++ T  
Sbjct: 119 GQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLA 175

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S    ++T+    N  
Sbjct: 176 NGAVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQITDGRSNNTE 235

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++ PDS  + F SD+ G+ Q+Y M  NG   +RI+ +   +  D   S  G  +     
Sbjct: 236 PTWFPDSQTLAFTSDQAGRPQVYKMNINGGAAQRITWEGSQNQ-DADVSSDGKFMVMVSS 294

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +  +  I          ++L      + P+ +P+G  +I+S  +    GS L  +  +GR
Sbjct: 295 NNGQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--MGSVLNLVSTDGR 352

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L  T      P W  ++
Sbjct: 353 FKARLPATDGQVKSPAWSPYL 373


>gi|319940885|ref|ZP_08015224.1| tol-Pal system beta propeller repeat protein TolB [Sutterella
           wadsworthensis 3_1_45B]
 gi|319805767|gb|EFW02548.1| tol-Pal system beta propeller repeat protein TolB [Sutterella
           wadsworthensis 3_1_45B]
          Length = 434

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 100/435 (22%), Positives = 186/435 (42%), Gaps = 14/435 (3%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
           +  L    +  G        A +++       + + IA   F          +EV++ DL
Sbjct: 11  RRTLLGAGIAAGALSACPAFADLRIEITGVGANQIPIAIQPFQGASAAPTDPAEVIAADL 70

Query: 74  QRSDVFNLIS--QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           +RS  F  IS  Q++  + +  P+ +       +    V V G V      R  V    +
Sbjct: 71  ERSGAFRRISVTQEASAENLEKPEGLAAAGKAGAA---VYVVGAVQALSDGRWDVRCLFY 127

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           D    +Q+      +     R  AH  +D IY  +TGE   F S+I +V++       + 
Sbjct: 128 DAVSGEQLDSIGVSAGKDLLRMAAHRCADRIYTRLTGEGAMFASQIAYVAQ---LAKRRY 184

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L + D DG   R    S + I+  P +SP+ +++AY ++++   + VY+ +    R  +
Sbjct: 185 ELIIADSDGGVPRTALQSPEPII-SPTWSPDGRQLAYVSFEERKPI-VYVHELSTGR-RR 241

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           ++ NFR    AP +S +G+   +++ +D    IY ++   +  +R T +  I+    YS 
Sbjct: 242 KVANFRGNNSAPAWSPDGRELAVALSRDGLTQIYRINADGSGLKRFTQSYGIDTEPVYSK 301

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I F SDR G  Q+Y     G   +R++     +   P  SP G  +A+      ++
Sbjct: 302 DGRWIYFTSDRGGTPQIYRQPVAGGAAERVTFGSSYA-ISPDISPDGMRMAYISRIDAEY 360

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            + VM     Q+ L+   +  ++P+++P+GR L+++ +  G       S D   R  T +
Sbjct: 361 RLAVMDLSTGQDMLVTNTNRDESPSFAPNGRFLVYATEVSGRGVLGTCSADA--RLTTRL 418

Query: 432 NTPAYASDPQWVGFM 446
                  +P W   +
Sbjct: 419 YGEGDIREPAWGPIL 433


>gi|332851094|ref|ZP_08433203.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii 6013150]
 gi|332730258|gb|EGJ61583.1| Tol-Pal system beta propeller repeat protein TolB [Acinetobacter
           baumannii 6013150]
          Length = 426

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 101/422 (23%), Positives = 191/422 (45%), Gaps = 16/422 (3%)

Query: 25  GGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ 84
               PT+  A + +    A      IA   F + + L      +V  DL RS  F   S+
Sbjct: 18  SPLAPTAAFAQLHLEIAKAPDQAPKIAIVPFNNDNGL----YPIVETDLNRSGRFTSSSK 73

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
           +          +  +  DW + G   +VTG++ +       V ++L+DV+ ++ ++ +  
Sbjct: 74  NL---PANAAINQIQASDWQAAGIPYVVTGQIKQTADG-FEVHYQLYDVQKQQYLLNELL 129

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
               +  R+  H +SD IYQ++TG  GDF+ RI +V  +  +   + +L + D DG   +
Sbjct: 130 NVPASRIRQAGHMVSDAIYQALTGIPGDFSGRIAYVLRNPATPAERYTLQIADTDGEQPK 189

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +  SRD I   P ++P+ +K+AY +++ +    +YL D       + + +F+ +  AP 
Sbjct: 190 TVLSSRDPI-LSPAWTPDAKKIAYVSFETKRPA-IYLQDLSTGT-REVLTSFKGLNGAPS 246

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK  L +   +   +IY +DL +   +R+TN   I+  A Y+PD    +F SD  G
Sbjct: 247 FSPDGKSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSGIDTEARYTPDGKAFIFTSDSGG 306

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQE 383
             Q+Y         KR++     +      S  G  IA     SG  + + +   +    
Sbjct: 307 SPQIYRYDFGNGSVKRLTFKGSFNARG-TLSADGKKIALVHRPSGSNYKVAIQDINTGIV 365

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQW 442
            +L   S  ++P++SP+G+ ++++ ++       +  +  +GR    L +      +P W
Sbjct: 366 NILTPTSLDESPSFSPNGQMVVYATREGNRGLLSI--MSTDGRFRMNLPSEQGEVREPAW 423

Query: 443 VG 444
             
Sbjct: 424 AP 425


>gi|39995136|ref|NP_951087.1| tolB protein [Geobacter sulfurreducens PCA]
 gi|67461990|sp|Q74H67|TOLB_GEOSL RecName: Full=Protein tolB; Flags: Precursor
 gi|39981898|gb|AAR33360.1| tolB protein [Geobacter sulfurreducens PCA]
 gi|298504166|gb|ADI82889.1| TolB-related biopolymer transport periplasmic beta-propeller repeat
           protein [Geobacter sulfurreducens KN400]
          Length = 432

 Score =  340 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 120/440 (27%), Positives = 215/440 (48%), Gaps = 19/440 (4%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAF-VKVATNSANYSPVSIAFTKFVSID-----ELGGKV 65
           +++I   LL +L+    P  IH+  V     ++    +++A     ++       L   V
Sbjct: 3   HVRIFATLLALLVISVTPAVIHSEDVYREVTASGAHNLTLAVDNPRNLGGADDAALARDV 62

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
           +EV+  D+  +  F++++  +                W + G  +LV       G D + 
Sbjct: 63  AEVLRFDMTLAGPFSVMAPPAGTSPGGIRPGEFDLDSWRNAGVDLLVKSGYTITG-DSVT 121

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           +EFRL++    +++  K++    +  R+I HT SDDI Q++TGE+G F  +I FVS    
Sbjct: 122 MEFRLYNATQGRELAAKRYTGKRSDLRRITHTFSDDIMQTMTGERGPFTGKIAFVSTESG 181

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +      + +MD DG N++ LT +R  I   P FSPN +++AY +Y   +          
Sbjct: 182 N----KEIYLMDYDGHNVQRLTKNRS-INLNPDFSPNGRELAYTSYRRGNPD--LFRREI 234

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  + + R + +   +S +GK+  +++ +D   +IY++        RLT    I++
Sbjct: 235 FTGTEAVVSSHRGINVTGTWSPDGKQLALAMSRDGNSEIYAISRDGRDPRRLTTHQAIDV 294

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++SPD  +I F SDR GK Q+++M ++GSD +R++     +   P WSP+GD + + +
Sbjct: 295 SPAWSPDGKRIAFVSDRLGKPQVFIMNADGSDVRRLTTSGAYNV-SPRWSPKGDRLVYCR 353

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             G  F I  +  DG+ +  L  + + + P WSP GR L FS  +DG  G  +Y +  +G
Sbjct: 354 QEGG-FQIYSIATDGTGDTRLTSEGSNEHPRWSPDGRFLTFSSTRDG--GEAIYVMRSDG 410

Query: 426 RNETLIN-TPAYASDPQWVG 444
             +T +  +   AS P W  
Sbjct: 411 SGQTRVYRSKGKASHPTWSP 430


>gi|153820467|ref|ZP_01973134.1| tolB protein [Vibrio cholerae NCTC 8457]
 gi|126508988|gb|EAZ71582.1| tolB protein [Vibrio cholerae NCTC 8457]
          Length = 382

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 94/388 (24%), Positives = 173/388 (44%), Gaps = 29/388 (7%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L  +L+LIG  F    +A +++       +  P++I   K+    +L   VS V++
Sbjct: 1   MFKRLVFVLMLIGTGFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ +      Q   + + +  F  W S+G   L+TG + +  +    + ++L
Sbjct: 61  SDLQRSGKFSPVPTSKMPQTPYSEEQV-NFGKWTSMGVDSLLTGTITQNAEGSYVISYQL 119

Query: 131 WDVKDRKQ---------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            D+   +                      +  K      +  R+ AH I+D +Y+ +TGE
Sbjct: 120 VDIVRGQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V  +         L + D DG N R +  S+ Q L  P +SP+ Q +AY 
Sbjct: 180 RGAFLTRIAYVVVN-DKDPYPYQLRIADYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++ +     +Y+M+    +  +++ +F     APRFS +GK   + + K   + +Y++DL
Sbjct: 238 SFQNGQA-EIYMMNIYSGK-REKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDL 295

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +     +T+    N    + PD   ++F SDR GK Q+Y +  +G + KR++     + 
Sbjct: 296 ATRRLTEVTSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNL 355

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                +P G  +     S   F +    
Sbjct: 356 GGQ-ITPDGKFLVMVNRSDSGFNLAKQD 382



 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 7/170 (4%)

Query: 270 KRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            R    V  D+    Y +   D        +  +    +S ++SPD   + + S + G+ 
Sbjct: 185 TRIAYVVVNDKDPYPYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQNGQA 244

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           ++Y+M      +++++     +   P +SP G  +A          +  M     +   +
Sbjct: 245 EIYMMNIYSGKREKLTSFPRHN-GAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLTEV 303

Query: 387 VED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
               SN   P W P G+SLIF+  + G    ++Y ++L+G     +    
Sbjct: 304 TSGRSNNTEPFWHPDGKSLIFTSDRGGK--PQIYQVNLSGGETKRLTWQG 351



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 7/91 (7%)

Query: 359 DLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDT 414
             IA+   + +    + + +   DG  ERL++     L +P WSP G++L +   ++G  
Sbjct: 185 TRIAYVVVNDKDPYPYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQNGQ- 243

Query: 415 GSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
            +++Y +++ +G+ E L + P +   P++  
Sbjct: 244 -AEIYMMNIYSGKREKLTSFPRHNGAPRFSP 273


>gi|153824250|ref|ZP_01976917.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|126518227|gb|EAZ75452.1| conserved hypothetical protein [Vibrio cholerae B33]
          Length = 374

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 87/377 (23%), Positives = 167/377 (44%), Gaps = 29/377 (7%)

Query: 36  VKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
           +++       +  P++I   K+    +L   VS V++ DLQRS  F+ +      Q   +
Sbjct: 1   LELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIASDLQRSGKFSPVPTSKMPQTPYS 60

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ--------------- 138
            + +  F  W S+G   L+TG + +  +    + ++L D+   +                
Sbjct: 61  EEQV-NFGKWTSMGVDSLLTGTITQNAEGSYVISYQLVDIVRGQLTQGQSKALSQDGQLV 119

Query: 139 ------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                 +  K      +  R+ AH I+D +Y+ +TGE+G F +RI +V  +         
Sbjct: 120 LSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGAFLTRIAYVVVN-DKDPYPYQ 178

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L + D DG N R +  S+ Q L  P +SP+ Q +AY ++ +     +Y+M+    +  ++
Sbjct: 179 LRIADYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYVSFQNGQA-EIYMMNIYSGK-REK 235

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + +F     APRFS +GK   + + K   + +Y++DL +     +T+    N    + PD
Sbjct: 236 LTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLTEVTSGRSNNTEPFWHPD 295

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              ++F SDR GK Q+Y +  +G + KR++     +      +P G  +     S   F 
Sbjct: 296 GKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLGGQ-ITPDGKFLVMVNRSDSGFN 354

Query: 373 IGVMKKDGSQERLLVED 389
           +     +    ++L + 
Sbjct: 355 LAKQDLETGAMQILTKT 371



 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 7/170 (4%)

Query: 270 KRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            R    V  D+    Y +   D        +  +    +S ++SPD   + + S + G+ 
Sbjct: 162 TRIAYVVVNDKDPYPYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQNGQA 221

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           ++Y+M      +++++     +   P +SP G  +A          +  M     +   +
Sbjct: 222 EIYMMNIYSGKREKLTSFPRHN-GAPRFSPDGKTLALVLSKTGNLQVYTMDLATRRLTEV 280

Query: 387 VED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
               SN   P W P G+SLIF+  + G    ++Y ++L+G     +    
Sbjct: 281 TSGRSNNTEPFWHPDGKSLIFTSDRGGK--PQIYQVNLSGGETKRLTWQG 328


>gi|226952117|ref|ZP_03822581.1| protein TolB precursor [Acinetobacter sp. ATCC 27244]
 gi|226837145|gb|EEH69528.1| protein TolB precursor [Acinetobacter sp. ATCC 27244]
          Length = 427

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 102/439 (23%), Positives = 195/439 (44%), Gaps = 15/439 (3%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
            E+    +    +   I    P +  A +++    A      IA   F + +     +  
Sbjct: 1   MEKTRKHLIAIAVFTAISTAIPVTTFAQLQLEIAKAPEKAPKIAIVPFTNDNA----IYP 56

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +V  DL RS  F   SQ+      T   +  +  DW + G   +V G+      +   + 
Sbjct: 57  IVESDLNRSGRFTSASQNL---PATASMNQIQAGDWQNAGVPYVVVGQSKAINANTFEIH 113

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           ++L+DV+ ++ ++ +         R+  H ISD IYQ++TG  GDF+ RI +V  +  + 
Sbjct: 114 YQLYDVQKQQYLLNEVLTVPAGRVRQAGHMISDAIYQALTGIPGDFSGRIAYVLRNQANP 173

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             + +L + D DG   + +  SRD I   P ++P+ +K+AY +++ +    +YL D    
Sbjct: 174 AQRYTLQIADTDGEQPKTVLSSRDPI-LSPTWTPDAKKIAYVSFETKRPA-IYLQDLATG 231

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  + + +FR +  AP FS +G+  L +       +IY ++L +   +R+TN   I+  A
Sbjct: 232 Q-REVLASFRGLNGAPSFSPDGQSMLFTASMHGNPEIYQMNLNTRQVQRMTNDTAIDTEA 290

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
            YSPD    +F SDR G  Q+Y         +R++    A       S  G  +A     
Sbjct: 291 RYSPDGKSFIFTSDRGGSPQIYRYTFADKSVRRLTFRG-AFNARGTLSADGKRLALVHRP 349

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           SG  + + +   +     +L   S  ++P++SP+G+ ++++ ++       +  +  +GR
Sbjct: 350 SGSNYKVALQDINTGITNILTPTSLDESPSFSPNGQMVVYATREGNRGLLSI--MSTDGR 407

Query: 427 NE-TLINTPAYASDPQWVG 444
               L +      +P W  
Sbjct: 408 FRMNLPSEQGEVREPAWAP 426


>gi|213019077|ref|ZP_03334884.1| Protein tolB precursor [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995186|gb|EEB55827.1| Protein tolB precursor [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 427

 Score =  337 bits (864), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 146/441 (33%), Positives = 223/441 (50%), Gaps = 28/441 (6%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----IDELGGKVSE 67
           N+      L++ I  F P S  A + V    +N   + +  +K        +EL   +++
Sbjct: 8   NLMKLFVQLVLFISLFIPYSTKAVLYVDIKKSNIGNIDLVVSKCACKTEVENELSESITK 67

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V+  +L    +FN+                 + + W S     +VT  + +     L + 
Sbjct: 68  VIETNLSNCGLFNV-------------KRDAKVESWKS---DTVVTISLSEVSNRNLELS 111

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           FRL D    ++++ +        WRKI+H +SD I+  + GEKG FN++I +++E   S 
Sbjct: 112 FRLSDSFTNRELLTQSVVFLAKDWRKISHLVSDLIHDRLIGEKGHFNTKITYIAEEKDSN 171

Query: 188 IIK-NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 + VM++DG+NI+YLT   ++ +  PRFSPN + + Y +Y +     +  +    
Sbjct: 172 YKSVRKIAVMNQDGSNIKYLTNG-EKFVSTPRFSPNGKGIVYISYTNGKSYII--LKNLK 228

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D     I  F  +I APRFS +GK   IS       +I S+DL S  T+++T    I+ S
Sbjct: 229 DNTESIISAFEGVISAPRFSPDGKSLFISHSLSGETNILSLDLSSKRTKKITKGSAISTS 288

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S SPD   +VF SD  G +QLY++         KRIS      Y  PVWSP+GDLIAFT
Sbjct: 289 PSLSPDQKYMVFSSDISGSQQLYIIDFTKKSKKPKRISF-GNGRYATPVWSPKGDLIAFT 347

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           K    KF IGVMK DG +ERLL E   +++P W P+GR +IF+   +  + SKLY +DL 
Sbjct: 348 KIQSGKFYIGVMKPDGKEERLLSEGHKIESPAWLPNGREIIFT-NAESPSNSKLYLVDLV 406

Query: 425 GRNETLINTPAYASDPQWVGF 445
            +N+ ++ TP  AS P W  F
Sbjct: 407 KKNQKMVFTPTNASLPDWSYF 427


>gi|294648349|ref|ZP_06725857.1| TolB protein [Acinetobacter haemolyticus ATCC 19194]
 gi|292825761|gb|EFF84456.1| TolB protein [Acinetobacter haemolyticus ATCC 19194]
          Length = 427

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 102/439 (23%), Positives = 195/439 (44%), Gaps = 15/439 (3%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
            E+    +    +   I    P +  A +++    A      IA   F + +     +  
Sbjct: 1   MEKTRKHLIAIAVFTAISTTIPMTTFAQLQLEIAKAPEKAPKIAIVPFTNDNA----IYP 56

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +V  DL RS  F   SQ+      T   +  +  DW + G   +V G+      +   + 
Sbjct: 57  IVESDLNRSGRFTSASQNL---PATASMNQIQASDWQNAGVPYVVVGQSKAINANTFEIH 113

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           ++L+DV+ ++ ++ +         R+  H ISD IYQ++TG  GDF+ RI +V  +  + 
Sbjct: 114 YQLYDVQKQQYLLNEVLTVPAGRVRQAGHMISDAIYQALTGIPGDFSGRIAYVLRNQANP 173

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             + +L + D DG   + +  SRD I   P ++P+ +K+AY +++ +    +YL D    
Sbjct: 174 AQRYTLQIADTDGEQPKTVLSSRDPI-LSPTWTPDAKKIAYVSFETKRPA-IYLQDLATG 231

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  + + +FR +  AP FS +G+  L +       +IY ++L +   +R+TN   I+  A
Sbjct: 232 Q-REVLASFRGLNGAPSFSPDGQSMLFTASMHGNPEIYQMNLNTRQVQRMTNDTAIDTEA 290

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
            YSPD    +F SDR G  Q+Y         +R++    A       S  G  +A     
Sbjct: 291 RYSPDGKSFIFTSDRGGSPQIYRYTFADKSVRRLTFRG-AFNARGTLSADGKRLALVHRP 349

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           SG  + + +   +     +L   S  ++P++SP+G+ ++++ ++       +  +  +GR
Sbjct: 350 SGSSYKVALQDINTGITNILTPTSLDESPSFSPNGQMVVYATREGNRGLLSI--MSTDGR 407

Query: 427 NE-TLINTPAYASDPQWVG 444
               L +      +P W  
Sbjct: 408 FRMNLPSEQGEVREPAWAP 426


>gi|222054198|ref|YP_002536560.1| Tol-Pal system beta propeller repeat protein TolB [Geobacter sp.
           FRC-32]
 gi|221563487|gb|ACM19459.1| Tol-Pal system beta propeller repeat protein TolB [Geobacter sp.
           FRC-32]
          Length = 425

 Score =  336 bits (861), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 120/436 (27%), Positives = 208/436 (47%), Gaps = 17/436 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID---ELGGKVSEVV 69
           MK    L+++L           +++V         ++IA    +S     EL   ++++ 
Sbjct: 1   MKKFFILIMLLCLPGLNL-AQDYLEVTAPGNRQPQLAIAPPVPLSGTHNAELDKTITDIF 59

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           + DL  +  F ++     + +            W + GA +LV    I  G   + +EFR
Sbjct: 60  AFDLTLAGQFTVMPSPPGETRTGIRSGEFDLAPWQAAGANLLVKSGYIDNGA-TITMEFR 118

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            +DV   K+++ K+F       RKI H  S++I  + TGE G F  +  FVS +  +   
Sbjct: 119 FFDVSRGKELVVKRFTGKRTDQRKIVHMFSNEILSATTGETGPFTGKTAFVSTASGN--- 175

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              + +MD DG N++ LT +   I   P FSP+ +++ Y +Y   +   +Y  +      
Sbjct: 176 -KEIYLMDYDGYNVQRLTKNGS-INLNPDFSPSGKELIYTSYKRRNP-DLYRRELLTGAE 232

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             RI +   + +   +S +G R  +++ KD   +IY++        RLT    I++S ++
Sbjct: 233 A-RISSHPGINVTGAWSPDGTRIALAMSKDGNSEIYTISKDGKQVVRLTKNEAIDVSPAW 291

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD S+I F SDR GK Q++VM ++GS   R++     +   P WSP+G+ IA+ +  G 
Sbjct: 292 SPDGSRIAFVSDRLGKPQIFVMNADGSHVTRLTTSGTYNV-SPRWSPKGNTIAYCRQEGG 350

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            F I V+  DGS +  L  D + + P WSP GR ++FS  + G  G  +Y +  +G  + 
Sbjct: 351 -FQIHVINVDGSNDIKLTSDGSNEHPRWSPDGRFIVFSSSRAGKEG--IYVMRNDGTGQV 407

Query: 430 LINTPAYA-SDPQWVG 444
            ++  + A S P W  
Sbjct: 408 RVSRGSSADSHPTWSP 423



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 69/144 (47%), Gaps = 11/144 (7%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P + +  F S   G +++Y+M  +G + +R++++   +  +P +SP G  + +T +    
Sbjct: 161 PFTGKTAFVSTASGNKEIYLMDYDGYNVQRLTKNGSINL-NPDFSPSGKELIYTSYKRRN 219

Query: 371 FAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR--- 426
             +   +   G++ R+           WSP G  +  +  KDG   S++Y+I  +G+   
Sbjct: 220 PDLYRRELLTGAEARISSHPGINVTGAWSPDGTRIALAMSKDG--NSEIYTISKDGKQVV 277

Query: 427 ----NETLINTPAYASDPQWVGFM 446
               NE +  +PA++ D   + F+
Sbjct: 278 RLTKNEAIDVSPAWSPDGSRIAFV 301


>gi|332534221|ref|ZP_08410066.1| TolB protein precursor [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036301|gb|EGI72772.1| TolB protein precursor [Pseudoalteromonas haloplanktis ANT/505]
          Length = 389

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 96/396 (24%), Positives = 178/396 (44%), Gaps = 31/396 (7%)

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS  F  +      Q+ +  D    +  W + G + ++ G V ++   R  V + L DV
Sbjct: 1   MRSGKFKPVDVAQMPQQPSK-DGEIDYASWVNKGVEAVLVGEVEQQTDGRYLVRYELVDV 59

Query: 134 KDRKQ--------------------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
              +                     +  ++     + +R+ +H ISD IY+ +TGEKG F
Sbjct: 60  IRGQITGGNTQMMSNGKLVKSQDHILEARESVIGESGFRRYSHRISDVIYEKLTGEKGAF 119

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            ++I +V     +      L V D DG N + L  S++  L  P +SPN  K+AY T+++
Sbjct: 120 LTKIAYVIVR-DNEPKPYQLVVADYDGFNEQVLLRSKEP-LMSPAWSPNGTKLAYVTFEN 177

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQS 291
               ++Y+ D    +  + I ++R +  AP+FS +GK+ L+ + KD   A ++Y +DL +
Sbjct: 178 RQS-QIYIQDIYTGK-REIIASYRGINGAPQFSPDGKKLLLVLSKDKTGATEVYMLDLAT 235

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               RLTN   I+   S+ P+   IVF S+R G  Q+Y +       +R++ D + +   
Sbjct: 236 RKETRLTNHRSIDTEPSWYPNGQDIVFTSERGGNAQIYKLNLKTGRSQRLTFDGDMNL-A 294

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +P G  +     +  ++ +   +      ++L      ++P+ +P+G  +I+S   +
Sbjct: 295 GSITPDGKELVMVNRTNGQYHLAKKELATGAFQVLTRTRLDESPSIAPNGSMIIYSTLHN 354

Query: 412 GDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
                 L S+D  GR +  L         P W  ++
Sbjct: 355 NKQVLALVSMD--GRFKARLPVLDGQVKAPAWSPYL 388


>gi|190570675|ref|YP_001975033.1| Protein tolB precursor [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|226705897|sp|B3CP06|TOLB_WOLPP RecName: Full=Protein tolB; Flags: Precursor
 gi|190356947|emb|CAQ54333.1| Protein tolB precursor [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 418

 Score =  335 bits (860), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 148/440 (33%), Positives = 225/440 (51%), Gaps = 29/440 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----IDELGGKVSEV 68
           MK+ + L+L  I  F P S  A + V    +N   + +  +K        +EL   +++V
Sbjct: 1   MKLFVQLVL-FISLFIPYSTKAVLYVDIKKSNIGNIDLVVSKCACKTEVENELSESITKV 59

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +  +L    +FN+                 + + W S     +VT  + +     L + F
Sbjct: 60  IETNLSNCGLFNV-------------KRDAKVESWKS---DTVVTISLSEVSNRNLELSF 103

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RL D    ++++ +        WRKI+H +SD I+  + GEKG FN++I +++E   S  
Sbjct: 104 RLSDSFTNRELLTQSVVFLAKDWRKISHLVSDLIHDRLIGEKGHFNTKITYIAEEKDSNY 163

Query: 189 IK-NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + VM++DG+NI+YLT   ++ +  PRFSPN + + Y +Y +     +  +    D
Sbjct: 164 KSVRKIAVMNQDGSNIKYLTNG-EKFVSTPRFSPNGKGIVYISYTNGKSYII--LKNLKD 220

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                I  F  +I APRFS +GK   IS       +I S+DL S  T+++T    I+ S 
Sbjct: 221 NTESIISAFEGVISAPRFSPDGKSLFISHSLSGETNILSLDLSSKRTKKITKGSAISTSP 280

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S SPD   +VF SD  G +QLY++         KRIS      Y  PVWSP+GDLIAFTK
Sbjct: 281 SLSPDQKYMVFSSDISGSQQLYIIDFTKKSKKPKRISF-GNGRYATPVWSPKGDLIAFTK 339

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               KF IGVMK DG +ERLL E   +++P W P+GR +IF+   +  + SKLY +DL  
Sbjct: 340 IQSGKFYIGVMKPDGKEERLLSEGHKIESPAWLPNGREIIFT-NAESPSNSKLYLVDLVK 398

Query: 426 RNETLINTPAYASDPQWVGF 445
           +N+ ++ TP  AS P W  F
Sbjct: 399 KNQKMVFTPTNASLPDWSYF 418


>gi|165975760|ref|YP_001651353.1| colicin tolerance protein [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|226705862|sp|B0BT52|TOLB_ACTPJ RecName: Full=Protein tolB; Flags: Precursor
 gi|165875861|gb|ABY68909.1| colicin tolerance protein [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
          Length = 426

 Score =  335 bits (858), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 107/441 (24%), Positives = 184/441 (41%), Gaps = 22/441 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           + +K     ++ +I  FF  ++ A   V ++ +        IA   F +   +   V ++
Sbjct: 1   MKLKSRFTSIIGVITLFFSQTVTAESDVVISVDEGVSMAQPIAVVPFKANGGVPADVGQI 60

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           ++ DL+ S  F  + +     +  +   +   Q W  +G   +V G+V   G     V +
Sbjct: 61  IADDLRNSGKFTPVERSKLPAQPGSAAEV-NSQQWTDIGVDSVVVGQVTPTGGG-YNVAY 118

Query: 129 RLWDVKDRK--QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D        +    F    A  R+ AHT+SD +++ IT  +G F ++I +V +  VS
Sbjct: 119 QLVDTLSNPATVLAQGAFNVPAAQIRQGAHTVSDQVFEKITQIRGAFRTKIAYVVQRGVS 178

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L V D DG N   +  S++  L  P +SP+  ++AY T++++   +V + D R 
Sbjct: 179 ---SYELRVSDYDGYNAFTVVKSKEP-LMSPEWSPDGSRLAYVTFENKKA-QVVVHDLRS 233

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + +   R    AP FS +G R   +  +D  +DIY V        +LT     N  
Sbjct: 234 GS-RRVVAALRGHNGAPAFSPDGSRIAFASNQDGELDIYVVGANGGKPSKLTANAGNNTE 292

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD S I F SDR G  Q+Y M  +G     +      SY   V S   +LI     
Sbjct: 293 PSWSPDGSTIYFTSDRAGSPQVYRMGLSGGGASPM--GGSGSYNAKVSSDGKNLIMIA-- 348

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +           +L      ++P+ SP+G  +I+S  K      +L  +  +GR
Sbjct: 349 ---GDKVVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKGTSKVLQL--VSADGR 403

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L         P W  ++
Sbjct: 404 FKANLPGAGGQFKFPAWSPYL 424


>gi|95929959|ref|ZP_01312699.1| TolB-like [Desulfuromonas acetoxidans DSM 684]
 gi|95133928|gb|EAT15587.1| TolB-like [Desulfuromonas acetoxidans DSM 684]
          Length = 433

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 115/441 (26%), Positives = 207/441 (46%), Gaps = 21/441 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFV-KVATNSANYSPVSIA---FTKFVSID-ELGGKVSE 67
           MK  L + LVL+      +      ++   +     + ++      F   D  L   V +
Sbjct: 1   MKKTLIMALVLLVSVLGAAGMTTAKEIVITTPGKQAIPMSLTRILPFQQRDTVLEETVDK 60

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITN---PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           V+S DL  S +F  +   +F           +   F  W  LGAQVL  G     G  ++
Sbjct: 61  VLSADLDLSGLFEFVDPQAFLDDAGRMGLTSTEVNFTQWRLLGAQVLFKGGYRLNGS-QV 119

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            +  RL+DV  R+ ++G  +    +  R++AH+ +D I +++TG+ G FN+RI F+S   
Sbjct: 120 ELNLRLFDVISRRLLVGHNYRGQVSDVRRMAHSFADLILEALTGKSGAFNTRIAFISNQ- 178

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L +M+ DG + + +T  R  ++  P FSP  ++V + +Y   +   +Y  + 
Sbjct: 179 ---SGHKELYLMESDGYDPKRITNHRS-LVLNPDFSPLGREVIFTSYRQGNP-DLYRKEI 233

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +   RI  ++ + ++ R+  +G+   +++ +D   +IY   L     +R+TN+  I+
Sbjct: 234 YTGKEA-RISRYKGLNISGRYRHDGRELALTLSRDGNAEIYLESLSGQLHKRVTNSWAID 292

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +  S+SP   Q+VF S+R+G   L+V        +R++ + + +   P WSP G  I F+
Sbjct: 293 VDPSWSPIGDQLVFVSNRQGNPNLFVADLIDGQVRRLTYNGKYNAT-PAWSPDGKRIVFS 351

Query: 365 KFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +  G  F +  +  DG +ER L     N + P WSP GR +++S    G     +Y +  
Sbjct: 352 RLEGGAFNLFSIGVDGKEERQLTFGAGNKEHPRWSPDGRFIVYSNDISGKKA--IYVMRA 409

Query: 424 NGRNETLINT-PAYASDPQWV 443
           +G  +  I+T  A  S P W 
Sbjct: 410 DGSGQRRISTLDADCSHPAWS 430



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 5/177 (2%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R      +    ++Y ++      +R+TN   + ++  +SP   +++F S R+G   LY
Sbjct: 170 TRIAFISNQSGHKELYLMESDGYDPKRITNHRSLVLNPDFSPLGREVIFTSYRQGNPDLY 229

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
             +     + RIS+ K  +     +   G  +A T        I +    G   + +   
Sbjct: 230 RKEIYTGKEARISRYKGLNISG-RYRHDGRELALTLSRDGNAEIYLESLSGQLHKRVTNS 288

Query: 390 SNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
             +   P+WSP G  L+F   + G     L+  DL +G+   L     Y + P W  
Sbjct: 289 WAIDVDPSWSPIGDQLVFVSNRQG--NPNLFVADLIDGQVRRLTYNGKYNATPAWSP 343


>gi|240948555|ref|ZP_04752928.1| translocation protein TolB precursor [Actinobacillus minor NM305]
 gi|240297063|gb|EER47634.1| translocation protein TolB precursor [Actinobacillus minor NM305]
          Length = 426

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 110/441 (24%), Positives = 186/441 (42%), Gaps = 23/441 (5%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           +N+K  +  +L ++   F   + A   V ++ +        IA   F   D     V+++
Sbjct: 1   MNLKSRITSILGIMTLLFSNVVRAESDVVISVDEGVSMAQPIAVVPFKGGDS--ADVAQI 58

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           VS DL+ S  F  + +     +  +   +   Q W  +G  ++V G+V   G     V +
Sbjct: 59  VSDDLRNSGKFAPVERSKLPAQPGSAGEVVS-QQWTDIGVDMVVVGQVTPAGGGYYNVAY 117

Query: 129 RLWDVKDRK--QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L DV       +    F    A  R+ AHT+SD +++ IT  +G F ++I +V +  VS
Sbjct: 118 QLVDVLSNPAAVLTEGAFKVPAAQIRQGAHTVSDQVFEKITQIRGAFRTKIAYVVQRGVS 177

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L V D DG N   +  S++  L  P +SP   K+AY T++++   +V + D R 
Sbjct: 178 ---SYELRVSDYDGFNAFTVVQSKEP-LMSPEWSPEGSKLAYVTFENKKP-QVVVHDLRS 232

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             A + +   +    AP FS +G +   +  +D  ++IY V        +LT     N  
Sbjct: 233 G-ARRVVAALKGHNGAPAFSPDGSKIAFASNQDGELNIYVVGANGGTPSKLTANAGNNTE 291

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD   I F SDR G  Q+Y M S+G     +   K  +      S  G  +     
Sbjct: 292 PSWSPDGGSIYFTSDRSGSPQVYRMSSSGGGVSAVGGGKTYNA---KMSSDGKSLIMIAG 348

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +           +L      ++P+ SP+G  +I+S  K   TG  L  +  +GR
Sbjct: 349 D----KVVKQDLAAGSTEVLSSTFLDESPSISPNGIMVIYSSTKG--TGKVLQLVSADGR 402

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L  T      P W  ++
Sbjct: 403 FKANLPGTGGQYKFPAWSPYL 423


>gi|152979449|ref|YP_001345078.1| translocation protein TolB [Actinobacillus succinogenes 130Z]
 gi|171704378|sp|A6VQ96|TOLB_ACTSZ RecName: Full=Protein tolB; Flags: Precursor
 gi|150841172|gb|ABR75143.1| Tol-Pal system beta propeller repeat TolB [Actinobacillus
           succinogenes 130Z]
          Length = 427

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 95/440 (21%), Positives = 175/440 (39%), Gaps = 24/440 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +   + +  VL            V++  +        IA   F S   +   ++E+++ D
Sbjct: 4   IARLMSMCAVLFFAINSAYADDEVRIVIDEGVEGARPIAVVPFKSNGSVPADIAEIITAD 63

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I  +   Q+  +   +     W SLG   +V G+V   G    ++ ++L D
Sbjct: 64  LRNSGKFNPIPVNQMPQQPGSASEV-TPDAWASLGIDAVVVGQVTASGNG-YQIAYQLVD 121

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      +        P   R  AH +SD++++ +TG KG F +RI +V +     
Sbjct: 122 TVGASGNAGAVLAQNSLTVQPKWIRWGAHQVSDEVFEKMTGIKGAFRTRIAYVVQRNAG- 180

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              + L + D DG N +++     Q +  P +SP+ Q++AY ++++     V  +     
Sbjct: 181 --SHELRIADYDGFN-QFVVTRSSQPIMSPAWSPDGQRLAYVSFENRKSQLV--VHNLGS 235

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              K +  FR    AP FS +G R   +  +D  ++IY ++       +LT     N   
Sbjct: 236 GQRKVVAAFRGHNGAPAFSPDGSRLAFANNQDGLLNIYVMNSNGGHPTKLTGGAGNNTEP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S++ D  +I+F SDR G  Q+Y M    S     +       +    S  G  +      
Sbjct: 296 SWTQDG-RILFTSDRSGSPQVYSMS---SSGGGATLIGGGRSYSGQMSSDGKTLVMISGD 351

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 352 ----NVVKYDTTTGTSEVLSSTFLDESPSISPNGIMIIYSSTQG--LGKVLQLVSADGRF 405

Query: 428 E-TLINTPAYASDPQWVGFM 446
           +  L  +      P W  ++
Sbjct: 406 KARLPGSDGQVKFPAWSPYL 425


>gi|78224723|ref|YP_386470.1| WD-40-like beta propeller repeat-containing protein [Geobacter
           metallireducens GS-15]
 gi|119371044|sp|Q39PS9|TOLB_GEOMG RecName: Full=Protein tolB; Flags: Precursor
 gi|78195978|gb|ABB33745.1| WD40-like Beta Propeller [Geobacter metallireducens GS-15]
          Length = 429

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 118/439 (26%), Positives = 212/439 (48%), Gaps = 19/439 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFV---KVATNSANYSPVSIAFTKFVSIDELGG---KVS 66
           M   L +L+ ++    P  +H+     +V     +   +++   + +   +      + +
Sbjct: 1   MTRRLFILITIMLCLIPALLHSQEGYREVTAAGTHKLTLTVDSPRRLGGSDAPQVARETA 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           E +  D+  +  F + +  +             F  W   G  +LV       G + + +
Sbjct: 61  EALQFDMVLAGPFTVTAPSAAAASAGIRPGEFDFAPWRGAGVDLLVKSGYTVTG-NAMTM 119

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           EFRL++V   K+I+ K++   P   R+IAHT SDDI  ++TGE+G F  +I FVS    +
Sbjct: 120 EFRLYNVTQGKEILAKRYTGRPGDVRRIAHTFSDDIMAALTGERGPFTGKIAFVSTRAGA 179

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                ++ +MD DG N++ LT +R  I   P FSP+ +++ + +Y   +           
Sbjct: 180 ----KAIFLMDYDGHNVQQLTKNRS-INLNPDFSPSGKEIIFTSYRQGNPD--LFRRELF 232

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             A  RI ++R +     +S +GK   +++ KD   +IY++        RLTNT  I +S
Sbjct: 233 TGAEARISSYRGINATGAWSPDGKTIALTLSKDGNSEIYTISRDGKNPHRLTNTSAIEVS 292

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPD  +IVF SDR GK Q+++M ++G+  +R++     +   P WSP+GD I +++ 
Sbjct: 293 PAWSPDVRKIVFVSDRLGKPQIFIMNADGTGVRRLTTSGNYNV-SPRWSPKGDRIVYSRQ 351

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            G  F I  +  DG+ +  L  + + + P WSP GR + FS  + G  G  +Y +  +G 
Sbjct: 352 EGG-FQIYAINPDGTNDTRLTSEGSNEHPRWSPDGRFITFSSTRGGGEG--IYVMRADGS 408

Query: 427 NETLINTP-AYASDPQWVG 444
            +T ++      S P W  
Sbjct: 409 GQTRVSGGKGRDSHPTWSP 427



 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 54/228 (23%), Positives = 102/228 (44%), Gaps = 14/228 (6%)

Query: 135 DRKQIIGKKFF-SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV----SGII 189
             K+II   +   +P  +R+   T ++     I+  +G   +         +    S   
Sbjct: 210 SGKEIIFTSYRQGNPDLFRRELFTGAEA---RISSYRGINATGAWSPDGKTIALTLSKDG 266

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            + +  + RDG N   LT +   I   P +SP+ +K+ + +       ++++M+      
Sbjct: 267 NSEIYTISRDGKNPHRLTNT-SAIEVSPAWSPDVRKIVFVSDRLGKP-QIFIMNADGTG- 323

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +R+    +  ++PR+S  G R + S +++    IY+++       RLT+         +
Sbjct: 324 VRRLTTSGNYNVSPRWSPKGDRIVYS-RQEGGFQIYAINPDGTNDTRLTSEGSNE-HPRW 381

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           SPD   I F S R G E +YVM+++GS Q R+S   +     P WSP+
Sbjct: 382 SPDGRFITFSSTRGGGEGIYVMRADGSGQTRVS-GGKGRDSHPTWSPR 428


>gi|307262896|ref|ZP_07544520.1| hypothetical protein appser13_3210 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
 gi|306871801|gb|EFN03521.1| hypothetical protein appser13_3210 [Actinobacillus pleuropneumoniae
           serovar 13 str. N273]
          Length = 426

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 106/441 (24%), Positives = 183/441 (41%), Gaps = 22/441 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           + +K     ++ +I  FF  ++ A   V ++ +        IA   F +   +   V ++
Sbjct: 1   MKLKSRFTSIIGVITLFFSQTVTAESDVVISVDEGVSMAQPIAVVPFKANGGVPADVGQI 60

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           ++ DL+ S  F  + +     +  +   +   Q W  +G   +V G+V   G     V +
Sbjct: 61  IADDLRNSGKFTPVERSKLPAQPGSAAEV-NSQQWTDIGVDSVVVGQVTPTGGG-YNVAY 118

Query: 129 RLWDVKDRK--QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D        +    F    A  R+ AHT+SD +++ IT  +G F ++I +V +  VS
Sbjct: 119 QLVDTLSNPATVLAQGAFNVPAAQIRQGAHTVSDQVFEKITQIRGAFRTKIAYVVQRGVS 178

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L V D DG N   +  S++  L  P +SP+  ++AY T++++    V  +    
Sbjct: 179 ---SYELRVSDYDGYNAFTVVKSKEP-LMSPEWSPDGSRLAYVTFENKKAQVV--VHDLC 232

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             + + +   R    AP FS +G R   +  +D  +DIY V        +LT     N  
Sbjct: 233 SGSRRVVAALRGHNGAPAFSPDGSRIAFASNQDGELDIYVVGANGGKPSKLTANAGNNTE 292

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD S I F SDR G  Q+Y M S+G     +      SY   V S   +LI     
Sbjct: 293 PSWSPDGSTIYFTSDRAGSPQVYRMGSSGGGASPM--GGSGSYNAKVSSDGKNLIMIA-- 348

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +           +L      ++P+ SP+G  +I+S  K      +L  +  +GR
Sbjct: 349 ---GDKVVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKGTSKVLQL--VSADGR 403

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L         P W  ++
Sbjct: 404 FKANLPGAGGQFKFPAWSPYL 424


>gi|71892116|ref|YP_277848.1| hypothetical protein BPEN_348 [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|119371035|sp|Q492W9|TOLB_BLOPB RecName: Full=Protein tolB; Flags: Precursor
 gi|71796222|gb|AAZ40973.1| TolB [Candidatus Blochmannia pennsylvanicus str. BPEN]
          Length = 453

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 106/441 (24%), Positives = 187/441 (42%), Gaps = 18/441 (4%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG------GKVSEVV 69
            + L ++LI   +  ++ A + +       +   IA   F  +            ++ ++
Sbjct: 17  KVSLSIMLIIFLWKPALLADMHIEITCGVNAAHPIAVIPFTCVSNQYNKSISIEDIASII 76

Query: 70  SKDLQRSDVFNLISQDSFKQKITN-PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           + DL+ S  FN I  +    K T   D IP F  W  LG  ++V G V     +   + +
Sbjct: 77  AADLRNSSKFNTIPVEYLPHKPTKVSDVIPTF--WEKLGINIIVLGTVHINYDESYIISY 134

Query: 129 RLWDVKDRKQII--GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            L D      +I    ++       R +AH IS++I++ +TG KG F +RI +V   + +
Sbjct: 135 HLIDTSSNPALIISENQYSVEKKWLRYVAHAISNEIFEKLTGIKGAFCTRIAYV-LRIHN 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L + D DG N   +  S +  L  P +SP+ +K+AY T+       V  +    
Sbjct: 194 DHYPYELYISDYDGHNQISICRSTEP-LMSPAWSPDGKKIAYVTFASGHSELV--IQALN 250

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                 I +F     AP FS + K+   S+ K  ++++Y +DL+S    +LT     N  
Sbjct: 251 TGLVNNIVSFPGHNGAPSFSPDCKKLAFSLSKTGSLNLYIMDLESGEITQLTKNRNNNTE 310

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+ PD+  I + SD+ G  Q+Y +    ++ +R+S    ++  +P  S  G  I     
Sbjct: 311 PSWFPDNQNIAYTSDQGGSPQIYKINVKTTEIQRLSWLHTSNQ-NPNVSSDGTFIIMVNR 369

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-KKDGDTGSKLYSIDLNG 425
              K  I  +     QE +L +     +P+ +P+   +++S   KD  T S L  I ++G
Sbjct: 370 HQGKQNIAKLNLLTGQEEILTDTLLADSPSIAPNNTMVLYSNINKDLTTKSNLELISIDG 429

Query: 426 RNETLINTP-AYASDPQWVGF 445
             +  I         P W   
Sbjct: 430 HFKAHIQGDQGDIRFPTWSPL 450


>gi|167855025|ref|ZP_02477799.1| Dna-J like membrane chaperone protein [Haemophilus parasuis 29755]
 gi|167853873|gb|EDS25113.1| Dna-J like membrane chaperone protein [Haemophilus parasuis 29755]
          Length = 428

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 107/444 (24%), Positives = 190/444 (42%), Gaps = 27/444 (6%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           + +   L  +L ++G FF   + A   V+++ +        IA   F ++  +   V+++
Sbjct: 1   MKLVSRLTSILGIVGLFFSVGVKAESDVRISIDQGVSMAQPIAVIPFKAMGGVPDDVAQI 60

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           ++ DL+ S  F  + + S   + ++   +   + W ++G   +V G+V   G     + +
Sbjct: 61  IADDLRNSGKFTPLDRASLPAQPSSAAEV-NPEQWTNIGIDNVVVGQVSAVGGG-YNIAY 118

Query: 129 RLWDV-----KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           +L D           I    F    A  R  AHT+SD +++ +T  +G F ++I +V + 
Sbjct: 119 QLVDTLGTSGAAGNVIAQGSFNVPAAQMRLGAHTVSDQVFEKLTQIRGAFRTKIAYVVQR 178

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VS      L V D DG N   +  S++  L  P +SP+  K+AY T++++   +V + D
Sbjct: 179 GVS---SYELRVSDYDGFNAFTIVKSKEP-LMSPEWSPDGSKLAYVTFENKKS-QVVVHD 233

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R   A K IG+ R    AP FS +G R   +  +D  ++IY   +   +  +LT+    
Sbjct: 234 IRSG-ARKVIGSLRGHNGAPSFSPDGSRVAFASNQDGVLNIYVTGVGGGSPRQLTSNAGN 292

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N   S+SPD   I+F SDR G  Q+Y M S+G     I             S  G  +  
Sbjct: 293 NTEPSWSPDGGYILFTSDRGGLPQVYQMSSSGGGASLI-----GGSGSGKISADGKNLIM 347

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                    I            +      ++P+ SP+G  +I+S  K      +L  +  
Sbjct: 348 VSGD----RIVRRDLVSGSTEAISSTFLDESPSISPNGTMVIYSSTKGVSKVLQL--VSA 401

Query: 424 NGRNE-TLINTPAYASDPQWVGFM 446
           +GR +  L         P W  ++
Sbjct: 402 DGRFKANLPGAGGQYKFPAWSPYL 425


>gi|116748201|ref|YP_844888.1| TolB domain-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116697265|gb|ABK16453.1| TolB, N-terminal domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 457

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 110/435 (25%), Positives = 202/435 (46%), Gaps = 22/435 (5%)

Query: 23  LIGGFFPTSIHAF-VKVATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSD 77
            +G        A   ++   + N+  ++IA   F        +L  ++ E ++ DL  S 
Sbjct: 31  AVGMSRLAHAQAQRFELDLTNPNFQRIAIAIPDFKRQSSEQTQLAREMGETLAGDLDFSG 90

Query: 78  VFNLISQDSFKQKITNPDS---IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           +F  +    F +            +F DW  LGA  +V G  + +G   +++E RL+DV 
Sbjct: 91  IFRPLDPKGFLEDPQTMGLNAPEIKFPDWRRLGADYMVRGNYLVQG-GTVKIEARLFDVA 149

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             + +I K +      WR + H  +D+I  ++TGE+G F+++I +V     +      + 
Sbjct: 150 AGRPVIAKAYEGDVRGWRAMIHRFADEILYALTGERGVFDTKIAYVQSMGKN----KEIF 205

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D DG+N    +     +   P ++P   ++AY +Y D +  ++YL++ + D + + + 
Sbjct: 206 ISDFDGSNPVQASRDNS-LSLSPAWNPQMSQIAYVSYRDGNA-KIYLLNLQ-DGSSRLLC 262

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDS 313
            +  M ++P +        +++ +D   DI+ V   S    ++L     IN+S  +SPD 
Sbjct: 263 GYPGMNISPAWRPGRPELAVTLTRDGNPDIFLVSASSGQILQKLVQGRSINVSPDWSPDG 322

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             + F SD  G  Q+Y +      ++R++     +   P WSP+GD IA++   G +  I
Sbjct: 323 RSLAFVSDESGNPQIYAIDVGSGQKRRLTFSGTYN-TSPSWSPKGDFIAYSGTVGGRHHI 381

Query: 374 GVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +MK DGS  R L + D +  +PTWSP GR + FS  + G  GS ++   +NG     + 
Sbjct: 382 FIMKTDGSGNRQLTDGDGDDVSPTWSPDGRMIAFSSTRQG--GSAIWVSSVNGIGVRRLT 439

Query: 433 TPAYASD-PQWVGFM 446
                 + P W   M
Sbjct: 440 RQGGGQELPDWSPRM 454


>gi|85858720|ref|YP_460922.1| tolB protein [Syntrophus aciditrophicus SB]
 gi|85721811|gb|ABC76754.1| tolB protein [Syntrophus aciditrophicus SB]
          Length = 496

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 109/451 (24%), Positives = 204/451 (45%), Gaps = 16/451 (3%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV------SID 59
            +   + + +  C + +    F   S+   V +  +S  +  + IA   F          
Sbjct: 47  GVRRGMGVLLLFCAVALCAMPFVVRSVWGKVYIDIDSPAFQKIPIAVADFAPLNGNQGHA 106

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI---PRFQDWNSLGAQVLVTGRV 116
           +L       V K L  +  FN++++    +  +   ++     + +W SLGA+ L+ G  
Sbjct: 107 DLSSWFPGAVRKTLDLTGYFNILNRTGGPRDQSQTGAVQAQAAYGEWRSLGAEYLIQGGF 166

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
              G  +L  EFRL D+   +Q++GK++       R +      ++   +TG +G F++R
Sbjct: 167 SSRGT-QLVAEFRLIDIVQGRQLMGKQYTGGFEDRRDMVIRFVQEVLSLLTGGEGFFDTR 225

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I FV     S  +         DG ++  +      ++  PR+SP+ + +A+++Y D   
Sbjct: 226 IAFVVRQGRSSSLHTVGFGSQIDGRDLARV-AGSPSLILSPRWSPDGRYLAFSSYRDGKP 284

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
               +  +      K+I +F+ + L   +S +G+  L+++ KD   +IY +D++S    R
Sbjct: 285 DIFVVSPSGSGL--KKIVSFQGLNLPGAWSPDGRSLLLTLSKDGNEEIYVMDVRSGQVRR 342

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT    I++S  +SPD  +I F S+  G  Q+YVM ++G D +R++     +   P WSP
Sbjct: 343 LTRNSAIDVSPVWSPDGRRIAFVSNISGSPQIYVMNADGGDVRRLTYSGNYN-TTPAWSP 401

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +G  IA+    G  + I  + +DG   R L     + + P+WSP GR L FS +  G + 
Sbjct: 402 RGGKIAYEGKVGSGYQIFSIDEDGGNVRQLTSGAGDHEFPSWSPDGRFLTFSLRSGGRSR 461

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
             + + +      TL  +      P W   +
Sbjct: 462 INILNANTL-EVRTLYESTDRCLGPAWSPRL 491


>gi|46143830|ref|ZP_00133958.2| COG0823: Periplasmic component of the Tol biopolymer transport
           system [Actinobacillus pleuropneumoniae serovar 1 str.
           4074]
 gi|126207787|ref|YP_001053012.1| translocation protein TolB precursor [Actinobacillus
           pleuropneumoniae L20]
 gi|303249537|ref|ZP_07335744.1| colicin tolerance protein [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|303252545|ref|ZP_07338708.1| colicin tolerance protein [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|307245116|ref|ZP_07527209.1| hypothetical protein appser1_3260 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307247295|ref|ZP_07529343.1| hypothetical protein appser2_2920 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|307251836|ref|ZP_07533737.1| hypothetical protein appser6_3560 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307254072|ref|ZP_07535919.1| hypothetical protein appser9_3270 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307256331|ref|ZP_07538114.1| hypothetical protein appser10_3380 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|307258527|ref|ZP_07540264.1| hypothetical protein appser11_3280 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|307260770|ref|ZP_07542457.1| hypothetical protein appser12_3420 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
 gi|166229973|sp|A3MZ21|TOLB_ACTP2 RecName: Full=Protein tolB; Flags: Precursor
 gi|126096579|gb|ABN73407.1| translocation protein TolB precursor [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|302648513|gb|EFL78706.1| colicin tolerance protein [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|302651611|gb|EFL81760.1| colicin tolerance protein [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306854005|gb|EFM86217.1| hypothetical protein appser1_3260 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306856139|gb|EFM88294.1| hypothetical protein appser2_2920 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306860528|gb|EFM92540.1| hypothetical protein appser6_3560 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306862997|gb|EFM94944.1| hypothetical protein appser9_3270 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306865157|gb|EFM97057.1| hypothetical protein appser10_3380 [Actinobacillus pleuropneumoniae
           serovar 10 str. D13039]
 gi|306867431|gb|EFM99282.1| hypothetical protein appser11_3280 [Actinobacillus pleuropneumoniae
           serovar 11 str. 56153]
 gi|306869496|gb|EFN01286.1| hypothetical protein appser12_3420 [Actinobacillus pleuropneumoniae
           serovar 12 str. 1096]
          Length = 426

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 108/441 (24%), Positives = 185/441 (41%), Gaps = 22/441 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           + +K     ++ +I  FF  ++ A   V ++ +        IA   F +   +   V ++
Sbjct: 1   MKLKSRFTSIIGVITLFFSQTVTAESDVVISVDEGVSMAQPIAVVPFKANGGVPADVGQI 60

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           ++ DL+ S  F  + +     +  +   +   Q W  +G   +V G+V   G     V +
Sbjct: 61  IADDLRNSGKFTPVERSKLPAQPGSAAEV-NSQQWTDIGVDSVVVGQVTPTGGG-YNVAY 118

Query: 129 RLWDVKDRK--QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D        +    F    A  R+ AHT+SD +++ IT  +G F ++I +V +  VS
Sbjct: 119 QLVDTLSNPATVLAQGAFNVPAAQIRQGAHTVSDQVFEKITQIRGAFRTKIAYVVQRGVS 178

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L V D DG N   +  S++  L  P +SP+  ++AY T++++   +V + D R 
Sbjct: 179 ---SYELRVSDYDGYNAFTVVKSKEP-LMSPEWSPDGSRLAYVTFENKKA-QVVVHDLRS 233

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + +   R    AP FS +G R   +  +D  +DIY V        +LT     N  
Sbjct: 234 GS-RRVVAALRGHNGAPAFSPDGSRIAFASNQDGELDIYVVGANGGKPSKLTANAGNNTE 292

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD S I F SDR G  Q+Y M S+G     +      SY   V S   +LI     
Sbjct: 293 PSWSPDGSTIYFTSDRAGSPQVYRMGSSGGGASPM--GGSGSYNAKVSSDGKNLIMIA-- 348

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +           +L      ++P+ SP+G  +I+S  K      +L  +  +GR
Sbjct: 349 ---GDKVVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKGTSKVLQL--VSADGR 403

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L         P W  ++
Sbjct: 404 FKANLPGAGGQFKFPAWSPYL 424


>gi|307249519|ref|ZP_07531506.1| hypothetical protein appser4_3300 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306858374|gb|EFM90443.1| hypothetical protein appser4_3300 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
          Length = 426

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 108/441 (24%), Positives = 185/441 (41%), Gaps = 22/441 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           + +K     ++ +I  FF  ++ A   V ++ +        IA   F +   +   V ++
Sbjct: 1   MKLKSRFTSIIGVITLFFSQTVTAESDVVISVDEGVSMAQPIAVVPFKTNGGVPADVGQI 60

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           ++ DL+ S  F  + +     +  +   +   Q W  +G   +V G+V   G     V +
Sbjct: 61  IADDLRNSGKFTPVERSKLPAQPGSAAEV-NSQQWTDIGVDSVVVGQVTPTGGG-YNVAY 118

Query: 129 RLWDVKDRK--QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D        +    F    A  R+ AHT+SD +++ IT  +G F ++I +V +  VS
Sbjct: 119 QLVDTLSNPATVLAQGAFNVPAAQIRQGAHTVSDQVFEKITQIRGAFRTKIAYVVQRGVS 178

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L V D DG N   +  S++  L  P +SP+  ++AY T++++   +V + D R 
Sbjct: 179 ---SYELRVSDYDGYNAFTVVKSKEP-LMSPEWSPDGSRLAYVTFENKKA-QVVVHDLRS 233

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + +   R    AP FS +G R   +  +D  +DIY V        +LT     N  
Sbjct: 234 GS-RRVVAALRGHNGAPAFSPDGSRIAFASNQDGELDIYVVGANGGKPSKLTANAGNNTE 292

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD S I F SDR G  Q+Y M S+G     +      SY   V S   +LI     
Sbjct: 293 PSWSPDGSTIYFTSDRAGSPQVYRMGSSGGGASPM--GGSGSYNAKVSSDGKNLIMIA-- 348

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +           +L      ++P+ SP+G  +I+S  K      +L  +  +GR
Sbjct: 349 ---GDKVVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKGTSKVLQL--VSADGR 403

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L         P W  ++
Sbjct: 404 FKANLPGAGGQFKFPAWSPYL 424


>gi|322514836|ref|ZP_08067855.1| tol-Pal system beta propeller repeat protein TolB [Actinobacillus
           ureae ATCC 25976]
 gi|322119218|gb|EFX91359.1| tol-Pal system beta propeller repeat protein TolB [Actinobacillus
           ureae ATCC 25976]
          Length = 426

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 111/441 (25%), Positives = 186/441 (42%), Gaps = 22/441 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           + +K  L  ++ +I  FF   + A   V ++ +        IA   F +   +   V ++
Sbjct: 1   MKLKSRLTSVINVIALFFSNVVIAESDVVISVDEGVSMAQPIAVVPFKANGAVPADVGQI 60

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           ++ DL+ S  F  + +     +  +   +   Q W  +G   +V G+V   G     V +
Sbjct: 61  IADDLRNSGKFTPVERSRLPAQPGSAAEV-DSQQWTDIGVDSVVVGQVTPTGSG-YNVAY 118

Query: 129 RLWDVKDRKQ-IIGK-KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D       +  +  F    A  R+ AHT+SD +++ IT   G F ++I +V +  VS
Sbjct: 119 QLVDTLSNPAAVFAQGSFNVPAAQIRQGAHTVSDQVFEKITQILGAFRTKIAYVVQRGVS 178

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L V D DG N   +  SR+  L  P +SP+  ++AY T++++   +V + D R 
Sbjct: 179 ---SYELRVSDYDGYNAFTVVKSREP-LMSPEWSPDGSRLAYVTFENKKA-QVVVHDLRS 233

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + +   R    AP FS +G R   +  +D  +DIY V        +LT     N  
Sbjct: 234 GS-RRIVAALRGHNGAPAFSPDGSRIAFASNQDGELDIYVVGANGGKPSKLTANAGNNTE 292

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD S I F SDR G  Q+Y M S+G     +      SY   V S   +LI     
Sbjct: 293 PSWSPDGSTIYFTSDRAGSPQVYRMSSSGGGASPM--GGSGSYNAKVSSDGKNLIMIA-- 348

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +           +L      ++P+ SP+G  +I+S  K      +L  +  +GR
Sbjct: 349 ---GDKVVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKGTSKVLQL--VSADGR 403

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L  T      P W  ++
Sbjct: 404 FKANLPGTGGQFKFPAWSPYL 424


>gi|88800185|ref|ZP_01115753.1| TolB [Reinekea sp. MED297]
 gi|88777031|gb|EAR08238.1| TolB [Reinekea sp. MED297]
          Length = 434

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 96/441 (21%), Positives = 198/441 (44%), Gaps = 11/441 (2%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEV 68
           + +  ++ L+  ++   +P   HA + +         + +++    +     L  +V  +
Sbjct: 1   MTLLRSVRLMTAVLALCWPLLSHADLDIVVTKGYDTQTKIAVVPFFWEGSQALPERVDNL 60

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           ++ +L R+  F+ ++      +  + D +  F+DW  L  + L+ G +   G  ++  E 
Sbjct: 61  ITNNLVRTGRFDPLAPAKMLSQPYSEDGV-FFRDWRLLNQEFLIIGHLKPYGDAKVEAEI 119

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            L+DV   ++++           R  AH++SD  Y+ +TG +G F++RI FV+  +VS  
Sbjct: 120 ALYDVVKNRRVVRVTQVVGVHQLRDFAHSLSDLFYERMTGVRGIFSTRIAFVTRKIVSQQ 179

Query: 189 -IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L + D DG   R +  S + I+    +S    +VA+A     D  ++++ D R  
Sbjct: 180 QYDYRLQIADADGQRARTIYRSNEPIISV-AWSQKGDRVAFAN-KVGDRWKIFIQDLRSG 237

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +    I + R    AP FS +G+          + +IY  + Q+  +ERLT   +I+   
Sbjct: 238 QVNS-ISDVRGYTSAPSFSPDGRYLAYVSSYRNSPEIYLYEFQTGKSERLTRNSYIDTEP 296

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+S DS  IVF S++ G  Q+Y         +R++ +   +     +S  G  + F    
Sbjct: 297 SFSADSKSIVFTSEKGGSPQIYRYDLATKRTERLTFEGTQNLRA-RYSSDGKYLVFVHQI 355

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +F I  M       R+L E +  ++P+ +P+G  L+++ ++       L  + L+G+ 
Sbjct: 356 DGRFHIASMDLATRDIRVLTETNLDESPSIAPNGTMLVYATQRGNQG--VLAWVSLDGQV 413

Query: 428 ETLINTP-AYASDPQWVGFMD 447
              + +      +P W  +++
Sbjct: 414 TNQMKSDFGDVLEPAWSPYLN 434


>gi|118574600|sp|Q2LRP7|TOLB_SYNAS RecName: Full=Protein tolB; Flags: Precursor
          Length = 452

 Score =  331 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 109/451 (24%), Positives = 204/451 (45%), Gaps = 16/451 (3%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV------SID 59
            +   + + +  C + +    F   S+   V +  +S  +  + IA   F          
Sbjct: 3   GVRRGMGVLLLFCAVALCAMPFVVRSVWGKVYIDIDSPAFQKIPIAVADFAPLNGNQGHA 62

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI---PRFQDWNSLGAQVLVTGRV 116
           +L       V K L  +  FN++++    +  +   ++     + +W SLGA+ L+ G  
Sbjct: 63  DLSSWFPGAVRKTLDLTGYFNILNRTGGPRDQSQTGAVQAQAAYGEWRSLGAEYLIQGGF 122

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
              G  +L  EFRL D+   +Q++GK++       R +      ++   +TG +G F++R
Sbjct: 123 SSRGT-QLVAEFRLIDIVQGRQLMGKQYTGGFEDRRDMVIRFVQEVLSLLTGGEGFFDTR 181

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I FV     S  +         DG ++  +      ++  PR+SP+ + +A+++Y D   
Sbjct: 182 IAFVVRQGRSSSLHTVGFGSQIDGRDLARV-AGSPSLILSPRWSPDGRYLAFSSYRDGKP 240

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
               +  +      K+I +F+ + L   +S +G+  L+++ KD   +IY +D++S    R
Sbjct: 241 DIFVVSPSGSGL--KKIVSFQGLNLPGAWSPDGRSLLLTLSKDGNEEIYVMDVRSGQVRR 298

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT    I++S  +SPD  +I F S+  G  Q+YVM ++G D +R++     +   P WSP
Sbjct: 299 LTRNSAIDVSPVWSPDGRRIAFVSNISGSPQIYVMNADGGDVRRLTYSGNYN-TTPAWSP 357

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +G  IA+    G  + I  + +DG   R L     + + P+WSP GR L FS +  G + 
Sbjct: 358 RGGKIAYEGKVGSGYQIFSIDEDGGNVRQLTSGAGDHEFPSWSPDGRFLTFSLRSGGRSR 417

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
             + + +      TL  +      P W   +
Sbjct: 418 INILNANTL-EVRTLYESTDRCLGPAWSPRL 447


>gi|323143607|ref|ZP_08078284.1| Tol-Pal system beta propeller repeat protein TolB [Succinatimonas
           hippei YIT 12066]
 gi|322416670|gb|EFY07327.1| Tol-Pal system beta propeller repeat protein TolB [Succinatimonas
           hippei YIT 12066]
          Length = 426

 Score =  328 bits (842), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 108/434 (24%), Positives = 198/434 (45%), Gaps = 15/434 (3%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
            L     G F  ++  A + +           IA   F    ++G  V+ VVS DL RS 
Sbjct: 3   FLGAFGFGLFIMSNAQAALNIEITGGINEGRKIAVLPFTQTADVGIDVASVVSADLMRSG 62

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV---K 134
            F+ +SQ      + + + +         GA+ +V G+V  +G +  +VEF L  +    
Sbjct: 63  KFSPLSQSQIPTGVFDGEKV-NADMMAGTGAEAVVFGKVYPDG-NTYQVEFLLQSLVGEN 120

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             + I   +  S   + R+ AH +SD +Y+ + G+KG F +RI +V            L 
Sbjct: 121 KGQVIAHYRGASGLNTMRQAAHRVSDRVYEKLVGQKGAFRTRIAYVVFR-HGAKFPYQLM 179

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
             D DG N   +  S + I   P +SP+  K+ Y ++++++   +++ D    +   RI 
Sbjct: 180 TADYDGFNEVPILKSTEPI-MTPSWSPDGTKIVYVSFENKNSA-IFIQDLNT-KQRTRIA 236

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F+ +  +P +S +G +  + + KD   DIY  D+ + A +R+T    I+   ++S D  
Sbjct: 237 SFKGLNSSPAWSPDGSKIAMVLSKDGQPDIYYYDVNTRAVQRVTADPAIDTEPNWSADGR 296

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           Q+ F S+R G+ Q+Y    N    +R++   + +           +I  T+ +G  + + 
Sbjct: 297 QLFFTSERGGRAQIYKFDFNTRTTERLTYQGQMNLSAEPIPGTNSVIMITRHNG--YRVA 354

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINT 433
            M +DGS   +L   +  ++P+ +P+G  +I+S    G  G  L  +  +GR    L +T
Sbjct: 355 RMDEDGSIY-MLTTSNLDESPSVAPNGSMVIYSTIYQGRKG--LAIVSADGRFRANLPST 411

Query: 434 PAYASDPQWVGFMD 447
               S P W   +D
Sbjct: 412 SGEISSPAWGPLLD 425


>gi|160872498|ref|ZP_02062630.1| Tol-Pal system beta propeller repeat protein TolB [Rickettsiella
           grylli]
 gi|159121297|gb|EDP46635.1| Tol-Pal system beta propeller repeat protein TolB [Rickettsiella
           grylli]
          Length = 451

 Score =  328 bits (841), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 94/439 (21%), Positives = 188/439 (42%), Gaps = 16/439 (3%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG--GKVSEVVSKDL 73
           +    +      +  +  A + +       + + IA   F   +       +S+V+  DL
Sbjct: 19  SFIYAITFSSLGWTQNAVAALNLELTQGVANRLPIAIVPFEQTETFSSEQDISQVIESDL 78

Query: 74  QRSDVFNLI--SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
             S  F +   ++ +  Q  T       +  W +     +V G++   G  R RV   + 
Sbjct: 79  NHSGQFKVTIANRQALPQPYTLDKISIPY--WRAQHIDDVVRGKITSMGHGRYRVYMDVV 136

Query: 132 DVKDRKQ--IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            V   ++  +   +        R   H +SD IY+ +TG +G F++RI ++  +      
Sbjct: 137 HVAQGRKQILTHTELTVRDTQLRAFGHHLSDLIYEKLTGVRGIFSTRIAYILVTRQKNHR 196

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L + D DG N + L  S   I   P +S + +++AY +++ + + R+Y+      + 
Sbjct: 197 VYRLQIADMDGHNAKSLLTSTQPI-MSPSWSHDGKRIAYVSFE-KIMPRIYIQTIATGQ- 253

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEA-MDIYSVDLQSNATERLTNTLFINISAS 308
            + I ++  +  AP +S + K+  +++ K+ A   IY ++L++    +++    I+   +
Sbjct: 254 RQVISDYPGINGAPAWSPDDKKLALALSKNSAAPKIYFINLENKRLSQVSFGFSIDTEPT 313

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +S D   ++F SDR G  Q+Y +  NG   +RI+ D   +     +SP G +I       
Sbjct: 314 WSQDGKSLLFTSDRGGGPQIYQINLNGKQLQRITFDGSYNARA-SYSPDGKMIVVLNRDQ 372

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             + I V   +      +       +P++SP+G+ ++F  K D      + S+D  GR  
Sbjct: 373 GMYNIAVQDLEDDTLFSVTHSGYEASPSFSPNGQMILFESKPDKRGLLGMASVD--GRIN 430

Query: 429 TLINTP-AYASDPQWVGFM 446
             + TP     DP W  F+
Sbjct: 431 CRLPTPEGDVQDPVWSPFL 449


>gi|82523888|emb|CAI78611.1| tolB protein [uncultured delta proteobacterium]
          Length = 437

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 116/424 (27%), Positives = 208/424 (49%), Gaps = 20/424 (4%)

Query: 34  AFVKVATNSANYSPVSIAFTKFVSIDELGG-----KVSEVVSKDLQRSDVFNLISQDSFK 88
           A V +  N+     + +    F  I+ L        + +V+  D++ S  F +I+  S+ 
Sbjct: 23  ARVYIDINAPVQRQIPVVVFPFKIINHLQNTHTITSLEKVLQDDIKYSSFFRIITPASYL 82

Query: 89  QKITNPDSIPR---FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF 145
                     +   F DW+++GA++++T  +     ++L +E RL+DV  ++ ++G+++ 
Sbjct: 83  VDPKKQGIKKKEIIFSDWSTIGAELIITTGITVI-NNKLNIELRLFDVFSKELLLGRQYN 141

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
            + A  RK  HT  D+I +++TG  G+F ++I FV  +        ++  +D DG N   
Sbjct: 142 VTMAEARKSIHTFMDEIIKTMTGYPGNFLTKIAFVKSTAG----VKNIYQVDFDGYNPTP 197

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +T  +  I   P +  N   + Y +Y  +    +YL +    R  K I  F+ + L+  +
Sbjct: 198 ITNFKS-ITLGPSWGKNSNILFYISY-FKGNPDLYLHNLLTGRIYK-ISGFKGINLSASW 254

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S   +    S+ KD   DIY ++   N   RLT +  I+IS ++SPD  +I F SDR G 
Sbjct: 255 SDKHQMIATSLSKDGYPDIYLMNTNGNIISRLTRSNSIDISPTWSPDGKKIAFVSDRGGN 314

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQE- 383
             +Y M SNG + +R++ +   +   P WSP+GD I FT       F I  ++ DGS   
Sbjct: 315 PNIYTMNSNGQNVRRLTFEGTYN-TSPDWSPKGDNIVFTGRDNLGYFQIYTIRPDGSGLC 373

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           ++    ++ + P+WSP GR +++S   +G +G  +   +  GR + LIN     + P W 
Sbjct: 374 QITFNSADNEEPSWSPDGRFIVYSSTIEGKSGIYIMLFNGTGRRK-LINLNGEQTYPVWS 432

Query: 444 GFMD 447
             +D
Sbjct: 433 PRLD 436


>gi|257465021|ref|ZP_05629392.1| translocation protein TolB [Actinobacillus minor 202]
 gi|257450681|gb|EEV24724.1| translocation protein TolB [Actinobacillus minor 202]
          Length = 425

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 107/441 (24%), Positives = 184/441 (41%), Gaps = 24/441 (5%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           +N+K  +  +L ++   F   + A   V ++ +        IA   F         V+++
Sbjct: 1   MNLKSRITSVLGIMALLFSNVVRAESDVVISVDEGVSMAQPIAVVPFKGG--ASADVAQI 58

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           VS DL+ S  F  + +     +  +   +   Q W  +G  ++V G+V   G     V +
Sbjct: 59  VSDDLRNSGKFTPVERSKLPAQPGSAGEVVS-QQWTDIGVDMVVVGQVTPAGGG-YNVAY 116

Query: 129 RLWDVKDRK--QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L DV       +    F    A  R+ AHT+SD +++ IT  +G F ++I +V +  VS
Sbjct: 117 QLVDVLSNPAAVLAQGAFNVPAAQIRQGAHTVSDQVFEKITQIRGAFRTKIAYVVQRGVS 176

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L V D DG N   +  S++  L  P +SP   K+AY T++++   +V + D R 
Sbjct: 177 ---SYELRVSDYDGFNAFTVVKSKEP-LMSPEWSPEGSKLAYVTFENKKP-QVVVHDLRS 231

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             A + +   +    AP FS +G +   +  +D  ++IY VD       +LT     N  
Sbjct: 232 G-ARRVVAALKGHNGAPAFSPDGSKIAFASNQDGELNIYVVDANGGTPSKLTANAGNNTE 290

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD   I F SDR G  Q+Y M S+G     +   K  +      S  G  +     
Sbjct: 291 PSWSPDGGSIYFTSDRSGSPQVYRMSSSGGGASAVGGGKTYNA---KMSSDGKSLIMIAG 347

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +           +L      ++P+ SP+G  +I+S  K      +L  +  +GR
Sbjct: 348 D----KVVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKGTSKVLQL--VSADGR 401

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L         P W  ++
Sbjct: 402 FKANLPGAGGQYKFPAWSPYL 422


>gi|222873073|gb|EEF10204.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 94/347 (27%), Positives = 157/347 (45%), Gaps = 11/347 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF 79
           LL  +         A  +V       + + IA   F    +   K+S ++  DL+RS  F
Sbjct: 23  LLAALASTPAIPALAQFRVEVTGVGLTQLPIAIAAFKGEGQAPQKISAIIQADLERSGQF 82

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
             +     +    +  S P    W    A  L  G + +    R  V FRLWDV   + +
Sbjct: 83  RAVDTAGVQ---LDETSRPDVAMWRQKSADSLAVGSITRLADGRYDVRFRLWDVVKGQDL 139

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            G+ F  +    R +AH ISD IY+ +TGEKG F++RI +V+++  +      L V D D
Sbjct: 140 GGQGFAVTTGDLRLVAHRISDYIYEKLTGEKGVFSTRIAYVTKAGSN----YRLWVADAD 195

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N +    S + I+  P +SP   ++AY +++    + VY+ D    R  + + NFR  
Sbjct: 196 GENAQSALSSPEPII-SPAWSPTGTQLAYVSFESRKPV-VYVHDVASGR-RRLVANFRGS 252

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP +S +G    +++ +D    +Y +  Q     RL  +  I+   ++S D   I F 
Sbjct: 253 NSAPAWSPDGNSLAVTLSRDGGSQLYLISAQGGEPRRLMQSSGIDTEPNFSSDGRSIYFV 312

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           SDR G  Q+Y + ++G   +R++     +   P  SP G  +A+   
Sbjct: 313 SDRGGAPQIYKVPASGGSAERVTFTGNYN-ISPSVSPDGKWLAYVSR 358



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 77/185 (41%), Gaps = 11/185 (5%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R     +      ++  D      +   ++    IS ++SP  +Q+ + S    K  +Y
Sbjct: 175 TRIAYVTKAGSNYRLWVADADGENAQSALSSPEPIISPAWSPTGTQLAYVSFESRKPVVY 234

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V       ++R+  +   S   P WSP G+ +A T        + ++   G + R L++ 
Sbjct: 235 VHDVASG-RRRLVANFRGSNSAPAWSPDGNSLAVTLSRDGGSQLYLISAQGGEPRRLMQS 293

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQ 441
           S +   P +S  GRS+ F   + G    ++Y +  +G +   +        +P+ + D +
Sbjct: 294 SGIDTEPNFSSDGRSIYFVSDRGG--APQIYKVPASGGSAERVTFTGNYNISPSVSPDGK 351

Query: 442 WVGFM 446
           W+ ++
Sbjct: 352 WLAYV 356


>gi|258545747|ref|ZP_05705981.1| TolB protein [Cardiobacterium hominis ATCC 15826]
 gi|258518992|gb|EEV87851.1| TolB protein [Cardiobacterium hominis ATCC 15826]
          Length = 425

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 117/431 (27%), Positives = 195/431 (45%), Gaps = 22/431 (5%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ 74
           + LCLLL        T+ HA V+V  + A  +   IA          G K+  +++ DL 
Sbjct: 10  LGLCLLLPW------TAAHAQVEVNVSGAQVAARPIAILPVQGDP--GVKMDYIIASDLH 61

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           ++ +F  +   SF +   +P ++ ++  W   GA  +V G +      +    F L DV 
Sbjct: 62  KTGLFQPLDPKSFPENPASPAAL-QYPAWKQAGADYVVMGMMQGGNAGQ----FVLNDVN 116

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV-SGIIKNSL 193
              Q+  +      A  R++AH  +D I   +TG++G F +++ +V E     G  + SL
Sbjct: 117 SASQLANENLH--DADARQLAHQAADWILYRLTGKRGVFGTQLAYVLEQGGAKGARRYSL 174

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V D DGAN R +  S + I   P ++PN Q VA+ TY +     V      I    + +
Sbjct: 175 LVSDVDGANRREIYSSNEPI-LSPSWAPNGQAVAFVTYANHHAQVVIQ---NIGGGSRVV 230

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                +  AP FS +G        ++   DIY ++L S A  RLT+   I+   ++SPD 
Sbjct: 231 AQGDGISSAPAFSPDGNYLAFVQSENNNPDIYLLNLASGAKSRLTDHAAIDTEPAFSPDG 290

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           + I F SDR G  Q+Y M  NG   +R+      S  +   SP G  +  T+ SG  + I
Sbjct: 291 NYIYFTSDRSGSPQIYRMSRNGGGAERVVSGSGYSA-NSDLSPDGSSLVLTRQSGGGYQI 349

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G       +   L      +  +++P+G+ +I++ K+ G +  K+ +    G  +TL ++
Sbjct: 350 GTYDLASKRFDALTSGRLDEGASFAPNGQLIIYATKEGGRSVLKVIN-SKGGVAQTLSDS 408

Query: 434 PAYASDPQWVG 444
                DP W  
Sbjct: 409 NGRLRDPAWGP 419



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/123 (11%), Positives = 39/123 (31%), Gaps = 4/123 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  M R+G     +  S          SP+   +           ++   D    R   
Sbjct: 304 QIYRMSRNGGGAERVV-SGSGYSANSDLSPDGSSLVLTRQS-GGGYQIGTYDLASKRFDA 361

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                  +     F+ NG+  + + ++     +  ++ +    + L+++       ++ P
Sbjct: 362 L--TSGRLDEGASFAPNGQLIIYATKEGGRSVLKVINSKGGVAQTLSDSNGRLRDPAWGP 419

Query: 312 DSS 314
           D+ 
Sbjct: 420 DTR 422


>gi|189426516|ref|YP_001953693.1| Tol-Pal system beta propeller repeat protein TolB [Geobacter
           lovleyi SZ]
 gi|189422775|gb|ACD97173.1| Tol-Pal system beta propeller repeat protein TolB [Geobacter
           lovleyi SZ]
          Length = 430

 Score =  325 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 124/439 (28%), Positives = 213/439 (48%), Gaps = 17/439 (3%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHA-FVKVATNSANYSPVSIAFTKFVSI---DELGGKVS 66
           +   I+L L  +L       +  A +++V         +++   + +      EL  + +
Sbjct: 1   MKQLIHLVLACLLFLSMQQDTGAANYIEVTAAGNRLLKLAVVPPQPMGTVIRPELANETA 60

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           E+ + DL  S +     +D+         +   F  W S G  +L+ G     G+  L +
Sbjct: 61  ELHAFDLTMSGLVAAERRDAAPLVHGLALTPVDFVPWLSAGYDLLIRGEYELRGQ-ELTL 119

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           EFRL+DV  +K +  K+F       R+ AH+ SD++ +++TGEKG F S+IL+VS    +
Sbjct: 120 EFRLYDVVAKKLLTSKRFLGREKDLRRYAHSFSDEVLRALTGEKGAFTSKILYVSTQSGN 179

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L VMD DG N + LT +R  I   P  SP+ ++V + +Y   +           
Sbjct: 180 ----KELAVMDWDGFNSQQLTGNRS-INLSPDISPDGREVIFTSYKRGNPD--LYKRALS 232

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                 + +   + +   +S +G R  +++ KD   +IY+V    +A  RLT +   N+S
Sbjct: 233 SNLEVPVSSRSGLNITGAWSPDGNRIALALSKDGNTEIYTVAKDGSAPNRLTVSHAANVS 292

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +++PD S+I F SDR GK Q++VM +NG + +R+      +  +P WSP+GD +AF + 
Sbjct: 293 PAWTPDGSKIAFVSDRLGKPQIFVMDANGGNVRRLITSGSYNV-NPSWSPKGDKLAFARM 351

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +G  F I V   DGS E  L  + N + P WSP GR + FS ++ G     +Y +  +G 
Sbjct: 352 AGG-FQIFVANADGSNEIQLTFEGNNERPRWSPDGRLITFSSRRGGQ--EAIYVMRADGS 408

Query: 427 NETLIN-TPAYASDPQWVG 444
            +T ++ +   +  P W  
Sbjct: 409 GQTKVSRSKGLSQHPVWTP 427



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 59/140 (42%), Gaps = 9/140 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S+I FVS+ +     K  + VMD +G N+R L  S       P +SP   K+A+A     
Sbjct: 300 SKIAFVSDRLG----KPQIFVMDANGGNVRRLITSGS-YNVNPSWSPKGDKLAFARMAGG 354

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              ++++ +       +    F      PR+S +G+    S ++     IY +    +  
Sbjct: 355 --FQIFVANADGSNEIQL--TFEGNNERPRWSPDGRLITFSSRRGGQEAIYVMRADGSGQ 410

Query: 295 ERLTNTLFINISASYSPDSS 314
            +++ +  ++    ++P   
Sbjct: 411 TKVSRSKGLSQHPVWTPRGQ 430


>gi|148244622|ref|YP_001219316.1| biopolymer transport protein TolB [Candidatus Vesicomyosocius
           okutanii HA]
 gi|166229993|sp|A5CWT2|TOLB_VESOH RecName: Full=Protein tolB; Flags: Precursor
 gi|146326449|dbj|BAF61592.1| biopolymer transport protein TolB [Candidatus Vesicomyosocius
           okutanii HA]
          Length = 424

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 107/431 (24%), Positives = 202/431 (46%), Gaps = 15/431 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF--VSIDELGGKVSEVVSKDLQRSD 77
            +V I   + T   A ++V       +   I  + F  V     G  +++++  +  RS 
Sbjct: 4   FIVFILSLYTTLSWAVLEVTIFKQEENTFPIVISDFFVVGDASQGKVIADIMRNNFNRSG 63

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F++++ +   +      S P F  W +   + +V G++ K  K    VE  L DV  +K
Sbjct: 64  EFSVVNANYIIR------SKPSFDKWKAKKIEAIVLGKLEKISKKIFNVEIELLDVYSKK 117

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVM 196
            +    F    +  R+IAH +SD IY ++ G++G FN+R+ +++  +   G  +  L + 
Sbjct: 118 TLYKDIFTVHNSGIRRIAHYLSDQIYHALLGKRGFFNTRLAYITVINKDKGEREYRLEIS 177

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D D  N + +  SR+  L  P +SP Q K+AY ++ +     V++    I R  +++  F
Sbjct: 178 DSDAQNPQTILKSREP-LLSPVWSPKQDKIAYVSFKNSRS-EVFIQYPFIRRKIQKLPYF 235

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             +  +P +  NG+  L+++ K+   DIYS  L S    RLT  + I+  ASYSPD ++I
Sbjct: 236 DGIASSPSWHPNGEILLLTLSKNGNKDIYSYQLSSKKLTRLTIDMGIDTEASYSPDGNKI 295

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +F S+R G+ Q+Y+     +   R +     +    V+SP G  +       + + I ++
Sbjct: 296 IFTSNRSGQVQVYIKDLKTNKINRATFKGRYNAQA-VFSPDGKSLIMVHKIDQDYRIALL 354

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPA 435
                  +++  +   ++P +SP+G  +IF+  + G     + SI   GR    L +   
Sbjct: 355 DIATKDLKVMTNNQLDESPFFSPNGDMIIFATNQGGFGVLSVVSIW--GRQIFELTSKVG 412

Query: 436 YASDPQWVGFM 446
              +P W  ++
Sbjct: 413 EVREPNWSHYL 423


>gi|118581723|ref|YP_902973.1| WD40 domain-containing protein [Pelobacter propionicus DSM 2379]
 gi|118504433|gb|ABL00916.1| WD-40 repeat-containing protein [Pelobacter propionicus DSM 2379]
          Length = 435

 Score =  323 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 110/414 (26%), Positives = 202/414 (48%), Gaps = 17/414 (4%)

Query: 37  KVATNSANYSPVSIAF-----TKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
            +   +     + +A       +  S  E   ++ EV++ D+  S +     ++ F    
Sbjct: 32  YIEITAPGNRQLRMAVDVPRSLEAASSPEKAREMGEVIAFDMNMSGLCLAEIKEQFNLSG 91

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
               +   F  W   G  +LV G    +G D L VEFRL+D+ +RK +  +++       
Sbjct: 92  ALLFAEADFNSWLKGGYDLLVRGEYSVKGDD-LTVEFRLFDLANRKMMTARRYLGKTKDL 150

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R+ AH+ +D+I  ++TGE+G F + I FVS    +      + +MD DG + R LT +  
Sbjct: 151 RRFAHSFADEILLAMTGERGCFTTHIAFVSTRSGN----KEIAIMDWDGHDTRQLTRNHS 206

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I   P FSPN +++ + +Y   +                 + +   + +   +S +G R
Sbjct: 207 -INLNPDFSPNGREIIFTSYKRHNPD--LYRRPLSSPVEVAVSHREGLNITGAWSPDGSR 263

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +++ KD   +IY++    ++  RLT+   I IS ++SP+ SQI F SDR GK Q+++M
Sbjct: 264 IALALSKDGNSEIYTIARDGSSPVRLTSHPAIEISPTWSPNGSQIAFVSDRLGKPQIFIM 323

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            ++G+  +R++ +   +  +P WSP+GD IA+ +  G  F I  +  +GS +  L    +
Sbjct: 324 NADGTGVRRLTTNGGYNV-NPRWSPKGDKIAYARMEGGGFQIHTINVNGSDDTQLTSSGS 382

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVG 444
            + P WSP GR + FS ++   +G ++Y +  +G  ET ++     ++ P W  
Sbjct: 383 SENPAWSPDGRLIAFSGRRG--SGDEIYVMRADGSGETRVSKVGGRSTQPAWQP 434


>gi|118602525|ref|YP_903740.1| TolB domain-containing protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166229990|sp|A1AWG2|TOLB_RUTMC RecName: Full=Protein tolB; Flags: Precursor
 gi|118567464|gb|ABL02269.1| TolB, N-terminal domain protein [Candidatus Ruthia magnifica str.
           Cm (Calyptogena magnifica)]
          Length = 424

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 111/430 (25%), Positives = 197/430 (45%), Gaps = 13/430 (3%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVSKDLQRSD 77
           LLVLI   + T     ++V     + +   I  + F        G  ++ V+  +  RS 
Sbjct: 4   LLVLILSLYTTLAWTVLEVTILKQDENAFPIVISDFSVIGDANQGKIIAHVIRNNFNRSG 63

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F+  S +         ++ P F  W +   + +V G++ K  K    VE  L DV  +K
Sbjct: 64  EFSASSVNYVI------NNKPNFDKWKAKKIEAIVLGKLEKISKKVFNVEIELLDVFSKK 117

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVM 196
            +   KF       R+IAH +SD IY  + GEKG F++R+ ++S +    G  +  L + 
Sbjct: 118 ILYKDKFVVHNRGIRRIAHYLSDQIYHVLLGEKGSFDTRLAYISVTNKGKGEREYRLEIS 177

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D D  N + +  S+  I   P +SP+Q K+AY ++ +     V++    + R  +++  F
Sbjct: 178 DSDAQNPQTILKSKKPI-LSPVWSPDQNKIAYVSFKNARS-EVFIQYPFVRRKTQKLPYF 235

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             +  AP +  NGK  L+++ K+   DIYS  L S    RLT  + I+  ASYS +  +I
Sbjct: 236 DGIASAPSWHPNGKNLLLTLSKNGNKDIYSYQLSSKKLTRLTTDVGIDTEASYSSEGDKI 295

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF S+R G+ Q+Y+     +   R +     +    V+SP    +A     G+ + I ++
Sbjct: 296 VFTSNRSGQVQVYIKDLKTNKINRATFKGRYNA-KAVFSPDDKSLAMVHRVGKDYRIALL 354

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                   ++  +   ++P +SP+G  +IF+  K   +   + SI L  +   L +    
Sbjct: 355 DIATKNLTIMTNNQLDESPFFSPNGSMIIFATNKGSSSVLSVVSI-LGRQTFELASKAGE 413

Query: 437 ASDPQWVGFM 446
             +P W  ++
Sbjct: 414 VREPNWSHYL 423


>gi|261493428|ref|ZP_05989953.1| TonB family auxiliary protein TolB [Mannheimia haemolytica serotype
           A2 str. BOVINE]
 gi|261496883|ref|ZP_05993251.1| TonB family auxiliary protein TolB [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261307407|gb|EEY08742.1| TonB family auxiliary protein TolB [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|261310922|gb|EEY12100.1| TonB family auxiliary protein TolB [Mannheimia haemolytica serotype
           A2 str. BOVINE]
          Length = 428

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 105/444 (23%), Positives = 189/444 (42%), Gaps = 26/444 (5%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           + +   +  ++ +      T + A   V+++ +        IA   F +   +   V+++
Sbjct: 1   MKLFSRISGVIGIFSALLTTQVVADSDVRISIDEGVSMAQPIAVVPFKASG-VPADVAQI 59

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +S DL+ S  F  + +     +  +   +     W+++G   +V G+V   G     V +
Sbjct: 60  ISDDLRNSGKFTPLERSQMPAQPGSAAEVVA-DQWSAIGIDNIVVGQVSSTGGG-YNVAY 117

Query: 129 RLWDVKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           +L D           I    F    A  R+ AHT+SD++++ +T  +G F ++I +V + 
Sbjct: 118 QLIDTLGTSGTAGGVIAQGSFIVPAAQIRQGAHTVSDEVFEKLTQIRGAFRTKIAYVVQR 177

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VS      L V D DG N   +T S++  L  P +SP+  ++AY T++++   +V + D
Sbjct: 178 GVS---SYELRVSDYDGFNAFTITTSKEP-LMSPEWSPDGSRLAYVTFENKKA-QVVVHD 232

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R   A + +   +    AP FS +G R   +  +D  ++IY V        +LT     
Sbjct: 233 IRSG-ARRVVAALKGHNGAPSFSPDGSRIAFASNQDGELNIYVVGSGGGTPSKLTANAGN 291

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N   S+SPD S I F SDR G  Q+Y M S+G     +      SY   V S   +LI  
Sbjct: 292 NTEPSWSPDGSTIYFTSDRAGSPQVYRMSSSGGGASPM--GGSGSYNAKVSSDGKNLIMI 349

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                    +           +L      ++P+ SP+G  +I+S  K      +L  +  
Sbjct: 350 A-----GDRVVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKGTSKVLQL--VSA 402

Query: 424 NGRNE-TLINTPAYASDPQWVGFM 446
           +GR +  L     +   P W  ++
Sbjct: 403 DGRFKANLPGAGGHYKFPAWSPYL 426


>gi|33152785|ref|NP_874138.1| colicin tolerance protein [Haemophilus ducreyi 35000HP]
 gi|67462000|sp|Q7VKU3|TOLB_HAEDU RecName: Full=Protein tolB; Flags: Precursor
 gi|33149009|gb|AAP96527.1| colicin tolerance protein [Haemophilus ducreyi 35000HP]
          Length = 426

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 105/441 (23%), Positives = 185/441 (41%), Gaps = 22/441 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           + +K     L+ ++  FF + + A   + ++ +        IA   F     +   V +V
Sbjct: 1   MKLKSRYTSLISVVSIFFSSMVMAESDIVISVDEGVSIAQPIAVVPFKVNGGVSEDVGQV 60

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V+ DL+ S  F  I +        +   I   Q W  +G  V+V G++     +   V +
Sbjct: 61  VADDLRNSGKFTPIQRAKLPSHPASVAEI-NSQQWTDIGVDVVVVGQITP-ANNGYNVAY 118

Query: 129 RLWDVKDRK--QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L D        ++   F       R+ AHT+SD I++ +T  +G F ++I +V +  VS
Sbjct: 119 QLVDTLSNPAVVLVQGSFNVPATQMRQAAHTVSDQIFEKLTQIRGAFRTKIAYVVQRGVS 178

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L V D DG N   +  S++  L  P +SPN  K+AY T++++   ++ + D R 
Sbjct: 179 A---YELRVADYDGFNAFTVVKSKEP-LMSPEWSPNGSKLAYVTFENKRP-QIVVHDLRS 233

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +    +   +    AP FS +G R   +  +D  ++IY  ++      +LT  +  N  
Sbjct: 234 GQRS-VVAALKGHNGAPAFSPDGSRLAFASNQDGELNIYIANINGGTPIKLTANVGNNTE 292

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD S I F SDR G  Q+Y M S+G+D   I      +      S  G  +     
Sbjct: 293 PSWSPDGSIIYFTSDRAGSPQVYRMSSSGNDVIPIGTRGSYNAKA---SSDGKNLIMIAG 349

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +           +L      ++P+ SP+G  +I+S  K      +L  +  +GR
Sbjct: 350 D----NVVKQDLTSGSTEVLSSTFLDESPSISPNGIMIIYSSTKGTSKVLQL--VSADGR 403

Query: 427 NE-TLINTPAYASDPQWVGFM 446
            +  L         P W  ++
Sbjct: 404 FKANLPGAEGQFKFPAWSPYL 424


>gi|99034160|ref|ZP_01314250.1| hypothetical protein Wendoof_01000957 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 396

 Score =  321 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 136/409 (33%), Positives = 212/409 (51%), Gaps = 26/409 (6%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----IDELGGKVSEVVSKDLQR 75
           L++ I  F P    A + V    ++   + +  +K         EL   +++V+  +L  
Sbjct: 7   LVLFISLFIPYFTKAALYVDIKKSSVGNIGLVVSKCTCKTALESELSENIAKVIGTNLSN 66

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
             +FN+       ++    +S    + W S     +VT  + +     L + FRL+D   
Sbjct: 67  CGLFNV-------KRGAEAES----KSWKS---DTVVTVSLSEISGSALELSFRLFDAFT 112

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLC 194
           +++++ +        WRKI H +SD I+  + GEKG FN++I +++E   S       + 
Sbjct: 113 KRELLTQSVVFPAKDWRKIGHLVSDVIHDRLIGEKGHFNTKITYIAEEKDSNYKSVRKIA 172

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           VM++DG+NI+YLT   D+ +  PRFSPN + + Y +Y +     +  +    D     I 
Sbjct: 173 VMNQDGSNIKYLTNG-DRFVSTPRFSPNGKGIVYISYANGKSYII--LKNLKDNTESIIS 229

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            F  ++ APRFS +GK  LIS       +I S+DL S  T+++T    I+ S S+SPD  
Sbjct: 230 AFEGVVSAPRFSPDGKSLLISHSLGGETNILSLDLSSKRTKKITKGSAISTSPSFSPDQK 289

Query: 315 QIVFESDREGKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            + F SD  G +QLYV+   +     KRIS      Y  PVWSP+GDLIAFTK    KF 
Sbjct: 290 YMAFSSDISGSQQLYVIDFTNKSKKPKRISF-GSGRYATPVWSPKGDLIAFTKIQSGKFY 348

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           IGVMK DG +ERLL E   +++P W P+GR +IF+R +   + SKLY +
Sbjct: 349 IGVMKPDGKEERLLSEGHKIESPAWLPNGREIIFTRTES-PSNSKLYLV 396



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 64/166 (38%), Gaps = 7/166 (4%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I  ++   +  + LTN      +  +SP+   IV+ S   GK  + +      + + I 
Sbjct: 170 KIAVMNQDGSNIKYLTNGDRFVSTPRFSPNGKGIVYISYANGKSYIILKNLKD-NTESII 228

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSG 401
              E     P +SP G  +  +   G +  I  +     + + + + S +  +P++SP  
Sbjct: 229 SAFEGVVSAPRFSPDGKSLLISHSLGGETNILSLDLSSKRTKKITKGSAISTSPSFSPDQ 288

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDPQWVG 444
           + + FS    G    +LY ID      + + +       + P W  
Sbjct: 289 KYMAFSSDISGSQ--QLYVIDFTNKSKKPKRISFGSGRYATPVWSP 332


>gi|126642629|ref|YP_001085613.1| tolerance to colicins E2 E, A, and K [Acinetobacter baumannii ATCC
           17978]
          Length = 381

 Score =  320 bits (821), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 96/393 (24%), Positives = 183/393 (46%), Gaps = 16/393 (4%)

Query: 54  KFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVT 113
            F + + L      +V  DL RS  F   S++          +  +  DW + G   +VT
Sbjct: 2   PFNNDNGL----YPIVETDLNRSGRFTSSSKNL---PANAAINQIQASDWQAAGIPYVVT 54

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G++ +       V ++L+DV+ ++ ++ +      +  R+  H +SD IYQ++TG  GDF
Sbjct: 55  GQIKQTADG-FEVHYQLYDVQKQQYLLNELLNVPASRIRQAGHIVSDAIYQALTGIPGDF 113

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + RI +V  +  +   + +L + D DG   + +  SRD I   P ++P+ +K+AY +++ 
Sbjct: 114 SGRIAYVLRNPATPAERYTLQIADTDGEQPKTVLSSRDPI-LSPAWTPDAKKIAYVSFET 172

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +    +YL D       + + +F+ +  AP FS +GK  L +   +   +IY +DL +  
Sbjct: 173 KRPA-IYLQDLSTGT-REVLTSFKGLNGAPSFSPDGKSMLFTASMNGNPEIYQMDLSTRQ 230

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            +R+TN   I+  A Y+PD    +F SDR G  Q+Y         KR++     +     
Sbjct: 231 VKRMTNDSGIDTEARYTPDGKAFIFTSDRGGSPQIYRYDFGNGSVKRLTFKGSFNARG-T 289

Query: 354 WSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            S  G  IA     SG  + + +   +     +L   S  ++P++SP+G+ ++++ ++  
Sbjct: 290 LSADGKKIALVHRPSGSNYKVAIQDINTGIVNILTPTSLDESPSFSPNGQMVVYATREGN 349

Query: 413 DTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
                +  +  +GR    L +      +P W  
Sbjct: 350 RGLLSI--MSTDGRFRMNLPSEQGEVREPAWAP 380


>gi|284007876|emb|CBA73795.1| TolB protein [Arsenophonus nasoniae]
          Length = 355

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 87/363 (23%), Positives = 164/363 (45%), Gaps = 11/363 (3%)

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKF 144
             Q+ T    +     W +LG   +V G+V      +  + ++L DV +     +   + 
Sbjct: 1   MPQQPTTASEV-TPNVWTALGINAVVVGQVQPAADGQYIISYQLVDVVNSPGAVLTQNQL 59

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
             +    R  AHTISD+++  +TG +G F +RI +V ++   G     L V D DG N +
Sbjct: 60  KVAAKWLRYAAHTISDEVFAKLTGIRGAFRTRIAYVVKTN-GGKFPYELRVSDYDGYN-Q 117

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +      + L  P +S + +K+AY T++        ++ T      ++I +F     AP 
Sbjct: 118 FTVHRSPEPLMSPAWSADGEKLAYVTFESGS--SALVIQTLATGEVRQIASFPRHNGAPT 175

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G +    + K  ++++Y +DL S  T ++T+    N   ++ PD+  +++ SD+ G
Sbjct: 176 FSPDGTKLAFVLSKSGSLNLYVMDLASGQTRQITDGRSNNTEPNWMPDNQTLIYTSDQAG 235

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + Q+Y +  NG   +RI+ + + +  D   SP G  +     S  K  I           
Sbjct: 236 RPQIYKLNINGGVPERITWEGKQNQ-DASVSPDGKFMVMVNSSDGKQHIAKQDLATGNVE 294

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWV 443
            L +    + P+ +P+G  +I+S  +    G+ L  +  +GR +  L  T      P W 
Sbjct: 295 YLTDTFLDETPSIAPNGTMVIYSSSQG--LGTVLQLVSTDGRFKARLPATDGQVKFPAWS 352

Query: 444 GFM 446
            ++
Sbjct: 353 PYL 355


>gi|32491161|ref|NP_871415.1| hypothetical protein WGLp412 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|32699700|sp|Q8D2E2|TOLB_WIGBR RecName: Full=Protein tolB; Flags: Precursor
 gi|25166368|dbj|BAC24558.1| tolB [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 431

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 101/432 (23%), Positives = 198/432 (45%), Gaps = 14/432 (3%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK----VSEVVSKDLQ 74
           LL  LI  FF  + ++ V ++ N        I  + F  ++         +S+++S DLQ
Sbjct: 4   LLFFLICVFFSKTSYSNVDISINKGIDISTPIGISSFEWVEVNENNNYENISKIISCDLQ 63

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            S  F+ I       K           + N L    ++TG++         + ++L D+ 
Sbjct: 64  NSGKFSPIEIYKESNKSIEKQIKNNSINLNKLNINTILTGKISLNYNGEYLISYKLIDLV 123

Query: 135 D--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           +   K ++         S+RK+AH IS++I++ +TG +G F++RI ++  +  +   K  
Sbjct: 124 NYPGKILLSGYRTVHLQSFRKVAHEISNEIFKKLTGIQGVFHTRIAYILYN-KNNEYKYK 182

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           LC+ D DG N + +    +  L  P +SP+ +K+AY T++ +    + + D +     K 
Sbjct: 183 LCISDYDGYN-QNIIHQSNMPLMSPSWSPDGKKIAYVTFE-KGSSEIKIKDIKTGS-IKH 239

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I +F     AP FS NG+    ++ K  ++++Y ++L++   +++T+    N   S+ PD
Sbjct: 240 ISSFPYHNGAPAFSPNGENLAFALSKTGSLNLYVMNLKNGYIKQITHGNSNNTEPSWFPD 299

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           ++ + + SD+ G  Q+Y +  +     R+S     +    V SP G  IA      +   
Sbjct: 300 NNSLAYTSDQSGTPQIYKINISNGKFNRLSWLGSKNQNANV-SPDGKFIAMVNSEKKSQH 358

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LI 431
           I +   +    +++ E    +AP+ SP+   +I++      +  +L  I  NGR +T ++
Sbjct: 359 IALFDINMDNAKIITETFLDEAPSISPNNVMIIYTSSYGDSSVIEL--ISTNGRFKTSIL 416

Query: 432 NTPAYASDPQWV 443
                   P W 
Sbjct: 417 KINGQIKFPAWS 428



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 5/132 (3%)

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            I++  + E K +L +   +G +Q  I          P WSP G  IA+  F      I 
Sbjct: 170 YILYNKNNEYKYKLCISDYDGYNQN-IIHQSNMPLMSPSWSPDGKKIAYVTFEKGSSEIK 228

Query: 375 VMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
           +        + +     +  AP +SP+G +L F+  K G     LY ++L NG  + + +
Sbjct: 229 IKDIKTGSIKHISSFPYHNGAPAFSPNGENLAFALSKTGS--LNLYVMNLKNGYIKQITH 286

Query: 433 TPAYASDPQWVG 444
             +  ++P W  
Sbjct: 287 GNSNNTEPSWFP 298


>gi|224370139|ref|YP_002604303.1| AglW [Desulfobacterium autotrophicum HRM2]
 gi|223692856|gb|ACN16139.1| AglW [Desulfobacterium autotrophicum HRM2]
          Length = 447

 Score =  318 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 100/450 (22%), Positives = 199/450 (44%), Gaps = 26/450 (5%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSI---HAFVKVATNSANYSPVSIAFTKFVS------I 58
             +L+  I+    +VL    F  +       V +  +      + +A   F         
Sbjct: 4   KRQLSRVISPIFYVVLAFLVFGQAAGSWAQQVYLNISDPFLRKIPVAVPLFKPLTGGAVE 63

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP---RFQDWNSLGAQVLVTGR 115
           D L G+  E++  DL+ +    ++   S+ +             F++W  +G++++VT  
Sbjct: 64  DRLAGEAREILVSDLEFTGYMTILDPLSYIENPATKGITRTDLNFKNWTVIGSELVVTCG 123

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           +++ G D L ++ RL+D    + ++GK +       R++ H    +I   +TG+ G F+S
Sbjct: 124 IVESGGD-LELKMRLFDPFTERLVVGKVYTGKVNDLRRMIHRFCSEISFHLTGKWGVFSS 182

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+ FVS    +      + V + DG N R +T   + I   P +S + Q +AY +Y   +
Sbjct: 183 RLAFVSTKGKN----KEIFVAEFDGHNSRQVTR-LNSISISPAWSSDGQWLAYTSYAGGN 237

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +Y+ +   +R    + NF+ M + P +         ++  +   +IY +  +    +
Sbjct: 238 P-DIYIKNLIQNRGA--VVNFKGMNITPAWIPGQFSLAAALSFENDQEIYLLTGKGRIIK 294

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +LTN+  I++S  +SPD  ++ F S R G  Q+Y+        +R++     +   P WS
Sbjct: 295 KLTNSWGIDVSPCFSPDGKKMAFVSKRAGTPQVYIQDMESDTVRRLTFTGRYN-TSPAWS 353

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           P GD IA+   +  +  I V+  DGS    L     + + P WSP    + F+  ++G  
Sbjct: 354 PDGDKIAYVGIANGEINIYVVGIDGSGVVQLTSSTGDNEDPCWSPDAGLIAFTSTREG-- 411

Query: 415 GSKLYSIDLNGRNETLI-NTPAYASDPQWV 443
            +++Y +   G  +  +       ++P+W 
Sbjct: 412 VARIYVMTATGGEQRRLFLMDGAQTNPEWS 441



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 64/176 (36%), Gaps = 4/176 (2%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R      K +  +I+  +   + + ++T    I+IS ++S D   + + S   G   +Y
Sbjct: 182 SRLAFVSTKGKNKEIFVAEFDGHNSRQVTRLNSISISPAWSSDGQWLAYTSYAGGNPDIY 241

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +     +    ++         P W P    +A          I ++   G   + L   
Sbjct: 242 IKNLIQNRGAVVNFKGMN--ITPAWIPGQFSLAAALSFENDQEIYLLTGKGRIIKKLTNS 299

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             +  +P +SP G+ + F  K+ G     +  ++ +     L  T  Y + P W  
Sbjct: 300 WGIDVSPCFSPDGKKMAFVSKRAGTPQVYIQDMESD-TVRRLTFTGRYNTSPAWSP 354


>gi|219870351|ref|YP_002474726.1| translocation protein TolB [Haemophilus parasuis SH0165]
 gi|219690555|gb|ACL31778.1| dna-J like membrane chaperone, translocation protein TolB/colicin
           tolerance protein/periplasmic component of the Tol
           biopolymer transport system [Haemophilus parasuis
           SH0165]
          Length = 391

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 100/404 (24%), Positives = 173/404 (42%), Gaps = 25/404 (6%)

Query: 49  SIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGA 108
            IA   F ++  +   V+++++ DL+ S  F  + + S   + ++   +   + W ++G 
Sbjct: 4   PIAVIPFKAMGGVPDDVAQIIADDLRNSGKFTPLDRASLPAQPSSAAEV-NPEQWTNIGI 62

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDV-----KDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
             +V G+V   G     + ++L D           I    F    A  R  AHT+SD ++
Sbjct: 63  DNVVVGQVSAVGGG-YNIAYQLVDTLGTSGAAGNVIAQGSFNVPAAQMRLGAHTVSDQVF 121

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           + +T  +G F ++I +V +  VS      L V D DG N   +  S++  L  P +SP+ 
Sbjct: 122 EKLTQIRGAFRTKIAYVVQRGVS---SYELRVSDYDGFNAFTIVKSKEP-LMSPEWSPDG 177

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            K+AY T++++   +V + D R   A K IG+ R    AP FS +G R   +  +D  ++
Sbjct: 178 SKLAYVTFENKKS-QVVVHDIRSG-ARKVIGSLRGHNGAPSFSPDGSRVAFASNQDGVLN 235

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           IY   +   +  +LT+    N   S+SPD   I+F SDR G  Q+Y M S+G     I  
Sbjct: 236 IYVTGVGGGSPRQLTSNAGNNTEPSWSPDGGYILFTSDRGGLPQVYQMSSSGGGASLI-- 293

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                      S  G  +           I            +      ++P+ SP+G  
Sbjct: 294 ---GGSGSGKISADGKNLIMVSGD----RIVRRDLVSGSTEAISSTFLDESPSISPNGTM 346

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           +I+S  K      +L  +  +GR +  L         P W  ++
Sbjct: 347 VIYSSTKGVSKVLQL--VSADGRFKANLPGAGGQYKFPAWSPYL 388


>gi|302038650|ref|YP_003798972.1| protein TolB [Candidatus Nitrospira defluvii]
 gi|300606714|emb|CBK43047.1| Protein TolB precursor [Candidatus Nitrospira defluvii]
          Length = 443

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 107/447 (23%), Positives = 214/447 (47%), Gaps = 20/447 (4%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV---SIDELGGKVSE 67
           + + I LC+++         S    V +     ++  + I    F      + LGG++ E
Sbjct: 6   IGLMIALCVVVGAGLFGILDSRATDVFLEATRPDFQKIPIGVFGFQNGGGPEWLGGRIEE 65

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPR--FQDWNSLGAQVLVTGRVIKEGKDR-- 123
           V+  DLQRS VF+L+   +   K     +  +  F+     G  VLV G+  ++   +  
Sbjct: 66  VLKADLQRSLVFSLVDLPAIGVKAREVSTTDKAIFKQAAENGVSVLVWGKSGQKNGSKES 125

Query: 124 -LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            L ++  ++D    + + GK++  S +  R +AH  +D++    TGE G   ++I++V+E
Sbjct: 126 ELLMDGFVYDSGSDEVVGGKRYVGSTSVVRLMAHRFADELVFRYTGEPGIARTKIVYVAE 185

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
              +      L VMD DG   + +T     +   PR+SP+++ + +  Y   +   + ++
Sbjct: 186 HGNA----RELFVMDYDGYEPKQITADG-FLNLMPRWSPDRRFIVFTAYRSRNTQDIDIL 240

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +    +    + +   + + P  S +G     +  +D   +IY +D ++   +RLT    
Sbjct: 241 ELATGKRWTLV-SMAGLNITPALSPDGNFLAFASSQDGNSEIYKLDTRTKTPQRLTVNQG 299

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            ++S ++SP   +I F SDR G  Q+++M ++GS+ +R++ + + +   P WSP+G+ IA
Sbjct: 300 GDLSPTWSPTGREIAFTSDRGGAPQVFIMSADGSNVRRLTYEGDYNA-APAWSPRGNWIA 358

Query: 363 FTKFSGEK-FAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +   + ++ + I  +  DG  + ++        +P+WSP GR + FS   DG   S +Y 
Sbjct: 359 YVCRTAQRLYKICTVSPDGQKRVQVTTGPGIDDSPSWSPDGRHITFSSTVDGK--SHIYM 416

Query: 421 IDLNGRN-ETLINTPAYASDPQWVGFM 446
           +D +G+  E +     + S P W   +
Sbjct: 417 VDTDGKGLERITFGGTHNSSPSWSPAL 443


>gi|218780986|ref|YP_002432304.1| hypothetical protein Dalk_3146 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762370|gb|ACL04836.1| WD40 domain protein beta Propeller [Desulfatibacillum alkenivorans
           AK-01]
          Length = 442

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 106/451 (23%), Positives = 200/451 (44%), Gaps = 23/451 (5%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVA-TNSANYSPVSIAFTKFVSID------ 59
           +++  N     C L +LI      S  A       N+     + IA   F          
Sbjct: 1   MSKTFNRTACTCFLFLLIMTVLAGSASAARYEYWINNPFLRKIPIAIKDFEPKTVNEEPR 60

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFK--QKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +   +  E +   L+    F ++ ++S+              F +W S+GA  LVTG + 
Sbjct: 61  QAAVQAKEWLVSGLEFVRYFQILPEESYIIGDGEGLTAQTINFANWVSIGADHLVTGGLD 120

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
                 L +E RL+DV   + I+GK++       RK+      +I   +T  +G F ++I
Sbjct: 121 LR-DGVLVLELRLFDVPRNRLIVGKRYKGRVEDMRKMIRRFCVEIVTELTDSRGVFGTKI 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            FVS    +G     +   + DG + + LT S  +I   P +S +   +AY +Y D    
Sbjct: 180 AFVS----NGPGNKEIFACEYDGFDPQQLT-SGSKIALSPAWSGDGTHMAYVSYADG-PP 233

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ +    R  K    ++ + + P +         ++  +   +IYS+       ++L
Sbjct: 234 EIFIRNLAQKRGVKV--AYKGINVTPAWDPTRFALAATLSLNGDQEIYSLTGNGKIIKKL 291

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN   I++S SYSPD  ++ F S+R G  Q+Y+M+ +     R++ D + +   P +SP+
Sbjct: 292 TNNWGIDVSPSYSPDGKRMAFVSNRGGSPQIYIMELDTGQTSRVTFDGKYN-SAPAFSPR 350

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           GD IA+       F +  ++ DG+  + L +   + + P+WSP G  + FS  ++G   +
Sbjct: 351 GDRIAYCGMVDGTFDVFTVRTDGTDLQRLTDHPGDDEEPSWSPDGTLIAFSTTREGK--A 408

Query: 417 KLYSIDLNGRNET-LINTPAYASDPQWVGFM 446
           K+Y +  +G ++  L+      + P W  ++
Sbjct: 409 KIYVMTSHGTDQRKLLELEGAQTQPAWSPWL 439


>gi|88607556|ref|YP_505595.1| translocation protein TolB [Anaplasma phagocytophilum HZ]
 gi|88598619|gb|ABD44089.1| TolB family protein [Anaplasma phagocytophilum HZ]
          Length = 435

 Score =  313 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 136/448 (30%), Positives = 227/448 (50%), Gaps = 23/448 (5%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS-----IDEL 61
           ++  L +      LL   GG       A ++++    N   +SIAF    S       ++
Sbjct: 1   MSIRLGVATFFIFLLFCCGG-----AVASLRLSITKGNTGKLSIAFAPLHSFESNLAQKI 55

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD-WNSLGAQVLVTGRVIKEG 120
           G   ++++ KDL  + +F     D+  + +        + + W  L   +L+TG V +  
Sbjct: 56  GESCTDIILKDLNNTGLF-----DARIEILDPTSDGAAYSNVWRELKHDILLTGNVQELS 110

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
             R+ ++  +WDV   K++ GK F      WR+ AHT++D IY  ITG  G F+S+I ++
Sbjct: 111 HGRMGIKLFVWDVAAEKKLSGKSFNFEIGGWRRAAHTVADHIYTRITGNGGYFDSKIAYI 170

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ +     +  + +MD DGAN  Y +   +  L  PRFSP+ + + Y            
Sbjct: 171 ADMLG----ERRIALMDYDGANSVYASIDNNGWLSFPRFSPDTKSIVYTLTSQSSPSGRV 226

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           ++          +     ++ + RFS +G+  L+S   + + DIYS  L S    RLT  
Sbjct: 227 MLYDMRREVSSLLIGMSGIVSSVRFSPSGREILLSESLNGSTDIYSFSLISKKLTRLTAD 286

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            F+N SASYSPD   IVF SDR+G   LY+M +NGS+ ++IS      Y  PVWSP G  
Sbjct: 287 EFMNTSASYSPDEKSIVFASDRDGGSHLYIMDANGSNPRKISS-GSGRYMSPVWSPNGTW 345

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR--KKDGDTGSKL 418
           IAFTK  G +  IG+M+ +GS+ER++  D   + P+W+P+G+++++++  ++     ++L
Sbjct: 346 IAFTKVKGARCYIGIMRPNGSKERMIASDCFAEGPSWAPNGQAVLYTKHVQRVEHLATEL 405

Query: 419 YSIDLNGRNETLINTPAYASDPQWVGFM 446
             +DL+  N   INTP+ A    W   M
Sbjct: 406 AMVDLSSMNRRAINTPSDALIAHWSNTM 433


>gi|86157087|ref|YP_463872.1| TolB-like protein [Anaeromyxobacter dehalogenans 2CP-C]
 gi|119371034|sp|Q2INP9|TOLB_ANADE RecName: Full=Protein tolB; Flags: Precursor
 gi|85773598|gb|ABC80435.1| TolB-like protein [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 434

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 113/418 (27%), Positives = 188/418 (44%), Gaps = 21/418 (5%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGG---KVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
            +   S ++ P+ IA   F    + G    + +EVV  DL  S +F+++    F      
Sbjct: 27  TIVVGSPDFRPLPIAVAAFQGEGDAGAAATQTAEVVRADLVLSGLFDVLDPRGFLADPAE 86

Query: 94  PDSIP--RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
             + P  RF  W  +GA  L   RV + G   L  E  L++V+  ++++ K      A  
Sbjct: 87  GFAAPSIRFARWADVGADGLAKARVRR-GPGGLEGELHLYEVRAGREVLVKLLRVDGADA 145

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R +AH ++D+I +  T E G F +RI  +      G     L   D DG N + L   R 
Sbjct: 146 RSLAHRMADEIVRYYTREPGIFATRIAAI----RRGRGTWELVTQDMDGGNQQVLLSERS 201

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            IL  P + P+ +++   +Y         L   R      R    +       +S +G R
Sbjct: 202 -ILMSPAWRPDGREILVTSYRSGRPE---LWAYRFSDRAFRPLGRQRNAFGGVYSPDGSR 257

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              +V +    D++ +    +   +LT+   I++S ++SPD  +I F SDR G  Q+YVM
Sbjct: 258 IAFTVSEGNVTDLWVMSADGSGARKLTSDPAIDVSPTWSPDGRRIAFVSDRSGTPQIYVM 317

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVED- 389
            ++GS  +R++     +   P WSP+GDLIAFT     K F + V+  D      + +D 
Sbjct: 318 GADGSGARRLTFQGNYNQT-PQWSPRGDLIAFTARDERKVFDVFVVAPDSGAISRITQDQ 376

Query: 390 -SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGF 445
               + P+W+P+GR +IF   ++G  G +L   D  G  +T + +     + P W   
Sbjct: 377 GRTNEEPSWAPNGRLMIFRTDRNG--GIQLVVSDARGDRQTPVTSGKTDLAAPAWGPL 432


>gi|220915811|ref|YP_002491115.1| TolB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254764837|sp|B8JD21|TOLB_ANAD2 RecName: Full=Protein tolB; Flags: Precursor
 gi|219953665|gb|ACL64049.1| TolB domain protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 434

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 112/418 (26%), Positives = 186/418 (44%), Gaps = 21/418 (5%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGG---KVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
            +   S ++ P+ IA   F    + G    + +EVV  DL  S +F+++    F    + 
Sbjct: 27  TIVVGSPDFRPLPIAVAAFQGEGDAGAAATQTAEVVRADLVLSGLFDVLDPRGFLADPSE 86

Query: 94  PDSIP--RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
             + P  RF  W  +GA  L   RV +     L  E  L++V+  ++++ K      A  
Sbjct: 87  GFAAPSIRFARWADVGADGLAKARVRRGPAG-LEGELHLYEVRAGREVLVKLLRVDGADA 145

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R +AH ++D+I +  T E G F +RI  +      G     L   D DG N + L   R 
Sbjct: 146 RSLAHRMADEIVRYYTREPGIFATRIAAI----RRGRGTWELVTQDMDGGNQQVLLSERS 201

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            IL  P + P+ +++   +Y         L   R      R            +S +G R
Sbjct: 202 -ILMSPAWRPDGREILVTSYRSGRPE---LWAYRFSDRAFRPLGRHRNAFGGVYSPDGSR 257

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              +V +    D++ +        +LT+   I++S ++SPD  +I F SDR G  Q+YVM
Sbjct: 258 IAFTVSEGNVTDLWVMSADGAGARKLTSDPAIDVSPTWSPDGRRIAFVSDRSGTPQIYVM 317

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVED- 389
            ++GS  +R++     +   P WSP+GDLIAFT     K F + V+  D      + +D 
Sbjct: 318 GADGSGARRLTFQGNYNQT-PQWSPRGDLIAFTARDERKVFDVFVVSPDSGAINRITQDQ 376

Query: 390 -SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGF 445
               + P+W+P+GR +IF   ++G  G +L   D  G  +T + +     + P W   
Sbjct: 377 GRTNEEPSWAPNGRLMIFRTDRNG--GIQLVVSDARGDRQTPVTSGKTDLAAPAWGPL 432


>gi|320354281|ref|YP_004195620.1| TolB domain-containing protein [Desulfobulbus propionicus DSM 2032]
 gi|320122783|gb|ADW18329.1| TolB domain-containing protein [Desulfobulbus propionicus DSM 2032]
          Length = 428

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 126/445 (28%), Positives = 214/445 (48%), Gaps = 23/445 (5%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKV--ATNSANYSPVSIAFTKFVS-IDELGG 63
           +    ++   + L +  +      ++ A  +     ++++   + +A   F       G 
Sbjct: 1   MKRRHSLFTVVILAVSFLSCLSARNLQAEERTYYDISASDVRKIMVAVPNFSGSGGNQGA 60

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
            V+++++K L+      +I    +           R  DW SLGA  +V G+V  +    
Sbjct: 61  AVAQLLTKGLELHGFIGVIDSSRYGGS--------RDADWKSLGADYVVLGQVSGDPAG- 111

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           + VE ++ DV     + G++F  S A    +   + D + Q  TGE G   +RI +VS++
Sbjct: 112 IAVEGQILDVASNASLAGRRFKGSAAQLEDMTLRLCDTLIQDFTGEMGVARTRIAYVSDA 171

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                 +  + + D  G + R +T  R  +   PRF+P+   +AY+TY   +   +Y+ D
Sbjct: 172 TG----RKEVYISDILGRHPRQVTRHR-ALCVSPRFTPDGNYLAYSTYHRGN-QDLYITD 225

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R + A   +     + LAP FS +G+  ++++ K    D+YS+D Q N   +LT+   I
Sbjct: 226 LRQNTATNALSRRNGLNLAPTFSPDGRTMVVTLSKGGNPDLYSMDRQGNIIRQLTSGAGI 285

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N+SASYSPD   + F SDR GK  +YVM + G   KR++     +  +PVWSP+GD IAF
Sbjct: 286 NVSASYSPDGQTLAFVSDRSGKPNVYVMSAGGGQAKRLTFKCPEN-SEPVWSPKGDEIAF 344

Query: 364 TKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           T   G  + + VM ++G   R L     N ++PTWSP GR L  +RK      S++  + 
Sbjct: 345 TGLQGGIYQLFVMDRNGGNVRQLSTGGGNYESPTWSPDGRLLAVTRKSGSR--SEICVVS 402

Query: 423 LNGRNET-LINTPAYASDPQWVGFM 446
            +G++   L       S PQW G +
Sbjct: 403 KSGKDVRSLFAMKGNQSYPQWSGRL 427


>gi|197121110|ref|YP_002133061.1| TolB domain protein [Anaeromyxobacter sp. K]
 gi|226705865|sp|B4UDE1|TOLB_ANASK RecName: Full=Protein tolB; Flags: Precursor
 gi|196170959|gb|ACG71932.1| TolB domain protein [Anaeromyxobacter sp. K]
          Length = 434

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 112/418 (26%), Positives = 186/418 (44%), Gaps = 21/418 (5%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELG---GKVSEVVSKDLQRSDVFNLISQDSFKQKITN 93
            +   S ++ P+ IA   F    + G    + +EVV  DL  S +F+++    F    + 
Sbjct: 27  TIVVGSPDFRPLPIAVAAFQGEGDAGVAATQTAEVVRADLVLSGLFDVLDPRGFLADPSE 86

Query: 94  PDSIP--RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
             + P  RF  W  +GA  L   RV +     L  E  L++V+  ++++ K      A  
Sbjct: 87  GFAAPSIRFARWADVGADGLAKARVRRGPAG-LEGELHLYEVRAGREVLVKLLRVDGADA 145

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R +AH ++D+I +  T E G F +RI  +      G     L   D DG N + L   R 
Sbjct: 146 RSLAHRMADEIVRYYTREPGIFATRIAAI----RRGRGTWELVTQDMDGGNQQVLLSERS 201

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            IL  P + P+ +++   +Y         L   R      R            +S +G R
Sbjct: 202 -ILMSPAWRPDGREILVTSYRSGRPE---LWAYRFSDRAFRPLGRHRNAFGGVYSPDGSR 257

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              +V +    D++ +        +LT+   I++S ++SPD  +I F SDR G  Q+YVM
Sbjct: 258 IAFTVSEGNVTDLWVMSADGVGARKLTSDPAIDVSPTWSPDGRRIAFVSDRSGTPQIYVM 317

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVED- 389
            ++GS  +R++     +   P WSP+GDLIAFT     K F + V+  D      + +D 
Sbjct: 318 GADGSGARRLTFQGNYNQT-PQWSPRGDLIAFTARDERKVFDVFVVSPDSGAINRITQDQ 376

Query: 390 -SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGF 445
               + P+W+P+GR +IF   ++G  G +L   D  G  +T + +     + P W   
Sbjct: 377 GRTNEEPSWAPNGRLMIFRTDRNG--GIQLVVSDARGDRQTPVTSGKTDLAAPAWGPL 432


>gi|94268877|ref|ZP_01291310.1| WD40-like Beta Propeller [delta proteobacterium MLMS-1]
 gi|93451428|gb|EAT02274.1| WD40-like Beta Propeller [delta proteobacterium MLMS-1]
          Length = 437

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 106/429 (24%), Positives = 198/429 (46%), Gaps = 27/429 (6%)

Query: 27  FFPTSIHAFVKVATNSANYSPVSIAFTKFVS------IDELGGKVSEVVSKDLQRSDVFN 80
                  A V +   S     +++A                G ++++++S+ L+      
Sbjct: 25  MAAQPATARVYLDITSPEMRKIAMAVPPMADQLQPDQTTGDGRRMADIMSRALEFHGFIE 84

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
           +I    + ++        +  +W+  GA+ +V GR        L +E RL D+   + I 
Sbjct: 85  MIEPQLYGER--------QEANWSRHGAEFVVLGRYRHSADG-LNLELRLLDIDAGRMIH 135

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G+++ +     R++    +D++ + +TGEKG   SRI FVS           + + D  G
Sbjct: 136 GRRYQAPREQLRQLLLRFTDEVVEVLTGEKGVSQSRIAFVS----DASGDKEIYLADILG 191

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            +IR +T  +D +   PRF+P+ + +AY +Y   +   +Y  D R  +  + I  +  + 
Sbjct: 192 DDIRRVTYHQD-LAVAPRFTPDGRGLAYTSYHRGNA-NLYQTDIRELKTTRAISRWVGLN 249

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           + P +   G + ++++ +D+  D+Y  D Q     RLT+   +N+S S++PD  ++ F S
Sbjct: 250 ITPSWPPAGDQMVLTLSRDDNPDLYLTDTQGQIIRRLTHGEGVNVSPSFAPDGRRLAFVS 309

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           DR G  Q+Y+M       +R++     +   P WSP G  IA+T        I +++ +G
Sbjct: 310 DRSGTPQIYIMDLRTMAVQRLTFQGNDN-TTPSWSPDGRWIAYTGRHEGVLHIFIIRPEG 368

Query: 381 SQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI--NTPAYA 437
                +     + + P+WSP  R L+FSR +      +L +I LNGRN  ++  + P   
Sbjct: 369 GPPIQVTRSWGHHETPSWSPDSRQLVFSRLRHEH--EQLCTILLNGRNLRVLFSDEPGNH 426

Query: 438 SDPQWVGFM 446
           S PQW   +
Sbjct: 427 SMPQWSPRL 435


>gi|33519798|ref|NP_878630.1| translocation protein TolB [Candidatus Blochmannia floridanus]
 gi|67462001|sp|Q7VR84|TOLB_BLOFL RecName: Full=Protein tolB; Flags: Precursor
 gi|33504143|emb|CAD83405.1| tolB protein precursor [Candidatus Blochmannia floridanus]
          Length = 460

 Score =  310 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 109/462 (23%), Positives = 199/462 (43%), Gaps = 39/462 (8%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG--------GK 64
           M I     ++LI   F     + +K+       +   IA   F++ + +           
Sbjct: 1   MTIFQKSFILLIIWNFSLFAFSDMKIEITHGINTAHPIAVIPFINNENITHELNNDNIED 60

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITN-PDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           ++ +++ DL+ S  FN +       + +   D IP F  W  LG   +V G +  + ++ 
Sbjct: 61  IASIIAADLRNSGKFNTLPIAYLPYQPSKLTDIIPTF--WEKLGINTVVLGAINIKNEN- 117

Query: 124 LRVEFRLWDVKDRK--QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             + ++L D  +     I+  ++       R  AHTISD+I++ +TG KG F +RI ++ 
Sbjct: 118 YVISYQLIDTSNNPALVILDNQYEIEKKHLRYTAHTISDEIFEKLTGIKGVFCTRIAYIL 177

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +  +      LC  D DG N   +  S +  L  P +SP+ +K+AY T+       +  
Sbjct: 178 YTN-NIKYAYELCTSDYDGHNQVSICRSSEP-LMSPAWSPDGKKLAYVTFASGHSELI-- 233

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           + T  +R+   I  F +   AP +S +GK+   S+ K  ++++Y +DL SN  +++T+  
Sbjct: 234 IQTLTNRSIDNIIQFPNHNGAPAWSPDGKKLAFSLSKTGSLNLYIMDLSSNNIQQITSNR 293

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDL 360
           + N   S+ PDS  + + SD+ G  Q+Y +  N + D  RIS     S   P  S  G  
Sbjct: 294 YNNTEPSWFPDSQNLAYTSDQGGVPQVYKININNNRDSHRISWL-NGSNQKPNISMDGTF 352

Query: 361 IAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +     +  K  I  +    G +E L  +      P+ SP+G   ++S     ++ S+LY
Sbjct: 353 MVMVNRNKGKQYISKLNFLTGEEETLTADSVLADTPSISPNGIMFMYSSIILNNSSSELY 412

Query: 420 -----------------SIDLNGRNETLINTP-AYASDPQWV 443
                               ++G+ +  +N        P W 
Sbjct: 413 LDKKFTNIPDNNQSILSLASIDGKFKAHLNGSTGSIRFPTWS 454


>gi|158522221|ref|YP_001530091.1| beta-propeller repeat-containing to-pal system protein TolB
           [Desulfococcus oleovorans Hxd3]
 gi|226705875|sp|A8ZUI2|TOLB_DESOH RecName: Full=Protein tolB; Flags: Precursor
 gi|158511047|gb|ABW68014.1| Tol-Pal system beta propeller repeat TolB [Desulfococcus oleovorans
           Hxd3]
          Length = 438

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 98/428 (22%), Positives = 193/428 (45%), Gaps = 23/428 (5%)

Query: 29  PTSIHAF-VKVATNSANYSPVSIAFTKFVSIDE------LGGKVSEVVSKDLQRSDVFNL 81
           P ++ A    V  ++     + IA   F ++             +++++  L+ +  FNL
Sbjct: 16  PATLFAQYDYVRISNPFLHKIPIAVPLFQALTGTEPEVKAAQSGADLLADTLEFTRYFNL 75

Query: 82  ISQDSFKQKITNPD---SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           I++ +F ++        +    ++W  +GA+ L+TG V   G   + +E RL+DV   + 
Sbjct: 76  INRAAFLERPDRTGVTLADIDCKNWRDIGAEFLITGGVTVAG-GMMEMELRLFDVFKERM 134

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           I+GKK+   P   RK+      ++ + +TG  G F SRI F+S    +G     +   + 
Sbjct: 135 ILGKKYKGKPVDQRKMIRRFCAEVMEQLTGTPGIFESRIAFIS----TGDGSKEIYACEF 190

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG N + +T     I   P +S + Q +AY +Y  +    +Y+     +R    + +   
Sbjct: 191 DGYNPQRITR-NSSINLSPAWSSDGQWLAYTSYR-KGGPDLYITHLTENRGT--VFSKEG 246

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           + +AP +         ++  +   +IY +        RLT +  I++S ++SPD  ++ F
Sbjct: 247 INIAPSWVPGQFMLAATLSFEGDQEIYLLTGSGTVVRRLTRSWGIDVSPTFSPDGKRMAF 306

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S R G  Q+++M       +R++ +   +  +P W+P  D IA+   +G  F + V+  
Sbjct: 307 VSGRAGSPQIFIMDMGSGRTQRLTFEGGYN-TNPSWNPVNDTIAYCAMTGGAFNVRVIDV 365

Query: 379 DGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAY 436
                  L  +  + ++P+WSP G  + FS  ++    S++Y +   G     L+  P  
Sbjct: 366 KTGATVALTADQGDNESPSWSPDGSLIAFSSTREA-GVSRIYVMTAAGTDPRRLLILPGE 424

Query: 437 ASDPQWVG 444
            + P+W  
Sbjct: 425 QTGPKWSP 432


>gi|146329411|ref|YP_001210056.1| TolB protein [Dichelobacter nodosus VCS1703A]
 gi|146232881|gb|ABQ13859.1| TolB protein [Dichelobacter nodosus VCS1703A]
          Length = 424

 Score =  307 bits (786), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 111/425 (26%), Positives = 193/425 (45%), Gaps = 13/425 (3%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFN 80
           L+L       S+ A V V  + A  +   IA          G K+  +++ DL ++ +F 
Sbjct: 8   LMLTCCLSAISVCAQVVVDVSGAMRAAQPIAVLPIQGDP--GVKMEFIIASDLHKTGLFQ 65

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
            ++ +  + +  +P  I  + +++ LGA  +  GR +         +F L  V ++K I 
Sbjct: 66  PVAPEQIRNRPNSPAEI-DYAEFSGLGASYVALGRTLDANGSS--AQFVLTQVANKKVIF 122

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
            ++  S  A  R  AH  +D I Q +TG +G F+S++ +V E   +     SL + D DG
Sbjct: 123 NEQVSSVDA--RATAHLAADLILQRLTGVQGAFSSKVAYVLEQANAKGRLYSLIISDFDG 180

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           AN R +  S    +  P +S + +++A+ TY       V  +      + + +  F    
Sbjct: 181 AN-RQVVYSSAMPIVSPSWSRDGRQIAFMTYARNHAQLV--IQDVASGSRRVVAEFEGTA 237

Query: 261 LAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            +P +S  G++  IS   +   MDIY +DL S A +R+TN   I+    +SPD   I F 
Sbjct: 238 SSPSWSPEGRQLAISRADEQGNMDIYLLDLASGAQQRITNHAAIDTEPEFSPDGRFIYFT 297

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SDR G  Q+Y M  +G +  R       S      SP G  +  T+ SG  + IG+ +  
Sbjct: 298 SDRAGNPQIYRMDRSGGNVNRAVVGGNYSTSSE-LSPDGQSMVLTRQSGGGYQIGLYQLG 356

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
               + L      +  T+SP+G+ ++++  + G T  K+ ++   G  +TL +      D
Sbjct: 357 SGSFQALTNGRLDEGATFSPNGQMIMYTATEGGRTVIKMINLKG-GVTQTLSDPSGRLRD 415

Query: 440 PQWVG 444
           P W  
Sbjct: 416 PAWGP 420


>gi|253702172|ref|YP_003023361.1| Tol-Pal system beta propeller repeat protein TolB [Geobacter sp.
           M21]
 gi|251777022|gb|ACT19603.1| Tol-Pal system beta propeller repeat protein TolB [Geobacter sp.
           M21]
          Length = 407

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 107/414 (25%), Positives = 201/414 (48%), Gaps = 27/414 (6%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
           +  A   +   +     + +          L G+V+  VS++L  S++F +    +   +
Sbjct: 17  AQAAEGYIDVTAPVSRKLKLFPAP---TTALAGQVTPEVSREL--SELFGMDLGLAGPFE 71

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
           ++   +          GA +++      +G   + +E RL D    ++I  K++  S   
Sbjct: 72  VSGDGA----------GADLILKSSYSAQG-GNITLECRLVDRVLNREITAKRYSGSSKE 120

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R++ H  SD++ +++TGEKG F  +I +V++   +      + VMD DG N + LT + 
Sbjct: 121 LRRMGHAFSDEVLRAVTGEKGPFTGKIAYVTKISGN----KEIFVMDYDGRNPQRLTNNG 176

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             I  +P F+P+ +++ Y +Y   +   +Y  +        RI +   +     +S +G 
Sbjct: 177 S-INLKPDFAPSGKEIIYTSYKKGNP-DLYRRELFTG-LEARISSRNGLNAMGAYSPDGG 233

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +  + + KD   +IY +  +     RLTN   I++S ++SPD S+I F SDR GK Q++V
Sbjct: 234 KIAMVMSKDGNSEIYLISREGKELARLTNNHAIDVSPAWSPDGSRIAFVSDRLGKPQVFV 293

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M ++G + +R++ +   +   P WSP+GD IA+ +  G  F I  +  DG+Q+  L    
Sbjct: 294 MNADGGNLRRLTTNGAYNVT-PRWSPKGDRIAYARQGGGGFQIHAINPDGTQDTQLTSAG 352

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTPAYASDPQWV 443
           + + P +SP GR ++FS  +DG     +Y +  +G  +T +    A  S P W 
Sbjct: 353 SNEHPRFSPDGRFIVFSSTRDG--AEAIYLMRADGSGQTRVSPNKAQNSHPTWS 404



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 63/144 (43%), Gaps = 11/144 (7%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P + +I + +   G ++++VM  +G + +R++ +   +   P ++P G  I +T +    
Sbjct: 142 PFTGKIAYVTKISGNKEIFVMDYDGRNPQRLTNNGSINL-KPDFAPSGKEIIYTSYKKGN 200

Query: 371 FAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +   +   G + R+   +       +SP G  +     KDG   S++Y I   G+   
Sbjct: 201 PDLYRRELFTGLEARISSRNGLNAMGAYSPDGGKIAMVMSKDG--NSEIYLISREGKELA 258

Query: 430 LIN-------TPAYASDPQWVGFM 446
            +        +PA++ D   + F+
Sbjct: 259 RLTNNHAIDVSPAWSPDGSRIAFV 282


>gi|197119875|ref|YP_002140302.1| TolB-like biopolymer transport periplasmic beta-propeller repeat
           protein [Geobacter bemidjiensis Bem]
 gi|197089235|gb|ACH40506.1| TolB-related biopolymer transport periplasmic beta-propeller repeat
           protein [Geobacter bemidjiensis Bem]
          Length = 407

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 103/419 (24%), Positives = 193/419 (46%), Gaps = 37/419 (8%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVS-----IDELGGKVSEVVSKDLQRSDVFNLISQD 85
           +  A   +   +     + +              E+  ++SE+   DL  +  F +    
Sbjct: 17  AQAAEGYIDVTAPVSRKLKLFPAPATGLAGQVPPEVSRELSELFGMDLGLAGPFEVSGDG 76

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF 145
           +                    GA +++      +G   + +E RL D    ++I  K++ 
Sbjct: 77  A--------------------GADLILKSSYSAQG-GNITLECRLVDRVLNREITAKRYS 115

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
            S    R++ H  SD++ +++TGEKG F  +I +V+++  +      + VMD DG N + 
Sbjct: 116 GSAKELRRMGHAFSDEVLRAVTGEKGPFTGKIAYVTKASGN----KEIFVMDYDGHNPQR 171

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           LT +   I   P F+P+ +++ Y +Y   +   +Y  +        RI +   +     +
Sbjct: 172 LTNNGS-INLNPDFAPSGKEIIYTSYKKGNP-DLYRRELFTG-LEARISSRSGLNATGAY 228

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G +  + + KD   +IY +  +     RLTN   I++S ++SPD S+IVF SDR GK
Sbjct: 229 SPDGSKIAMVMSKDGNSEIYLISREGKELARLTNNHAIDVSPAWSPDGSRIVFVSDRLGK 288

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            Q+++M ++G +  R++ +   +   P WSP+GD I + +  G  F I  +  DG+Q+  
Sbjct: 289 PQVFIMNADGGNVHRLTANGAYNVT-PRWSPKGDRIVYARQGGGGFQIYAINADGTQDTQ 347

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTPAYASDPQWV 443
           L    + + P +SP GR ++FS  +DG     +Y +  +G  +T +    +  S P W 
Sbjct: 348 LTSAGSNEHPRFSPDGRFIVFSSTRDG--AEAIYLMRADGSGQTRVSPNKSQNSHPTWS 404


>gi|328953807|ref|YP_004371141.1| Protein tolB [Desulfobacca acetoxidans DSM 11109]
 gi|328454131|gb|AEB09960.1| Protein tolB [Desulfobacca acetoxidans DSM 11109]
          Length = 427

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 106/440 (24%), Positives = 202/440 (45%), Gaps = 22/440 (5%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +N+ I++ LLLV  G        +   +   +       IA  K       G ++   ++
Sbjct: 1   MNVVISISLLLVWAGDGL---AQSREYIDVRAPITKKYVIATPKLQGPGGSGPELGAALA 57

Query: 71  ----KDLQRSDVFNLISQDSFKQKITNPD-SIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
               +DL+ S  F ++   ++      P  S  +  + ++LG  +++ G   +EG  +L 
Sbjct: 58  VQADQDLRLSGHFTVLDPGTYDSSPIGPSPSTGQLHNLSALGCNLVIAGGWRQEG-GQLV 116

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           ++ +L D    + ++GK++       +++     +++   +TGE+G    R+ F+S    
Sbjct: 117 LDLKLIDPGSGQMLVGKRYRGGANDGQRMMTQFVNEVVLFLTGERGVPQGRLAFIS---- 172

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G     L VMD  G   + LT  R  +   P +SP+ Q+V + +Y       +Y ++  
Sbjct: 173 GGTDVRELYVMDI-GGTPKQLTRYR-TLTLTPSWSPDGQEVFFCSYR-GGFPALYAVNPG 229

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +++    ++ + P     G     ++ K    +IY +D Q N  +RLT +  I+I
Sbjct: 230 SGS-IRKLSTHGTLNVTPAGGPRG-LLAATLNKSGDQEIYLLDRQGNIKQRLTQSPGIDI 287

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++SPD +Q+ F S+R G  Q+Y++ + G   +R++     +   P WSP+GDLIA+  
Sbjct: 288 SPTFSPDGAQVAFVSNRGGNPQIYIVSTGGGQPRRLTFGGTYNV-SPAWSPRGDLIAYAS 346

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-N 424
            +G  F I V+   G   R +  + + ++PTWSP G  +  S  + G   S +Y +++  
Sbjct: 347 RTGGGFQIFVISPQGGGARQITREGSNESPTWSPDGSFIACSSTRGGT--SAIYLVNVKT 404

Query: 425 GRNETLINTPAYASDPQWVG 444
           G    L   P   + P W  
Sbjct: 405 GTATRLTTMPGAQTQPAWAP 424


>gi|153003575|ref|YP_001377900.1| TolB domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152027148|gb|ABS24916.1| TolB domain protein [Anaeromyxobacter sp. Fw109-5]
          Length = 437

 Score =  302 bits (774), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 107/420 (25%), Positives = 196/420 (46%), Gaps = 20/420 (4%)

Query: 37  KVATNSANYSPVSIAFTKFVSI--DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
            +   S ++ P+ IA  +F     D     V+EVV  DL  S +F+++    F    +  
Sbjct: 29  TLTIGSPSFQPLPIAVAQFQGEGGDARAAGVTEVVRGDLSLSGLFDVLDPRGFLADPSEG 88

Query: 95  DSIP--RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
            + P  RF  W+ +GA+ LV  R+ ++  D L  E  L++V+  ++++ K+  ++ +  R
Sbjct: 89  WAAPTIRFARWSDVGAEGLVKARM-RQAGDELEAELHLYEVRAGREVLVKRLRAAASDPR 147

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
            + H ISD+I +  T E G F+++++ +            L + D DG N R L   R  
Sbjct: 148 ALGHRISDEIVRYYTREPGIFSTKLVAI----RKLRGHWELVMFDVDGKNPRVLLSER-T 202

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           IL  P + P+ + V   +Y          + T  DR  +R+    +      +S +G R 
Sbjct: 203 ILLAPCWRPDGRAVLLTSYRSGRPE--LWLYTLADRGFRRLAAIPNAYGG-VYSPDGTRV 259

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             ++      D++ ++      +RLT    +++S S+SPD +++ F SDR G  Q+Y+M 
Sbjct: 260 AFTITDRANSDVWVMNADGTGAKRLTREPALDLSPSWSPDGTRLAFVSDRSGTPQIYLMG 319

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVED-- 389
           ++GS  +R++     +   P WSP+GD IAFT     K F + V+  +  + + + +D  
Sbjct: 320 ADGSSPRRLTFQGNYNQT-PAWSPRGDAIAFTARDERKVFDVFVVSPENGKIQRVTQDQG 378

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE--TLINTPAYASDPQWVGFMD 447
              + PTW+P+GR +     + G    ++   D  G  +           S P W   ++
Sbjct: 379 RTNEEPTWAPNGRLMALKTDRAG-ASFQVVVSDARGEKQTVVTGGGGGELSAPAWGPLVE 437


>gi|254362584|ref|ZP_04978681.1| TonB family auxiliary protein TolB [Mannheimia haemolytica PHL213]
 gi|153094190|gb|EDN75077.1| TonB family auxiliary protein TolB [Mannheimia haemolytica PHL213]
          Length = 396

 Score =  302 bits (773), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 99/408 (24%), Positives = 176/408 (43%), Gaps = 23/408 (5%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
           + +   +  ++ +      T + A   V+++ +        IA   F +   +   V+++
Sbjct: 1   MKLFSRISGVIGIFSALLTTQVVADSDVRISIDEGVSMAQPIAVVPFKASG-VPADVAQI 59

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +S DL+ S  F  + +     +  +   +     W+++G   +V G+V   G     V +
Sbjct: 60  ISDDLRNSGKFTPLERSQMPAQPGSAAEVVA-DQWSAIGIDNIVVGQVSSTGGG-YNVAY 117

Query: 129 RLWDVKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           +L D           I    F    A  R+ AHT+SD++++ +T  +G F ++I +V + 
Sbjct: 118 QLIDTLGTSGTAGGVIAQGSFIVPAAQIRQGAHTVSDEVFEKLTQIRGAFRTKIAYVVQR 177

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VS      L V D DG N   +T S++  L  P +SP+  ++AY T++++   +V + D
Sbjct: 178 GVS---SYELRVSDYDGFNAFTITTSKEP-LMSPEWSPDGSRLAYVTFENKKA-QVVVHD 232

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R   A + +   +    AP FS +G R   +  +D  ++IY V        +LT     
Sbjct: 233 IRSG-ARRVVAALKGHNGAPSFSPDGSRIAFASNQDGELNIYVVGSGGGTPSKLTANAGN 291

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N   S+SPD S I F SDR G  Q+Y M S+G     +      SY   V S   +LI  
Sbjct: 292 NTEPSWSPDGSTIYFTSDRAGSPQVYRMSSSGGGASPM--GGSGSYNAKVSSDGKNLIMI 349

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                    +           +L      ++P+ SP+G  +I+S  K 
Sbjct: 350 A-----GDRVVKRDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKG 392



 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 68/168 (40%), Gaps = 5/168 (2%)

Query: 270 KRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +    VQ+   + ++   D        +T +    +S  +SPD S++ + +    K Q+
Sbjct: 169 TKIAYVVQRGVSSYELRVSDYDGFNAFTITTSKEPLMSPEWSPDGSRLAYVTFENKKAQV 228

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V       ++ ++  K  +   P +SP G  IAF      +  I V+   G     L  
Sbjct: 229 VVHDIRSGARRVVAALKGHN-GAPSFSPDGSRIAFASNQDGELNIYVVGSGGGTPSKLTA 287

Query: 389 D-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +  N   P+WSP G ++ F+  + G    ++Y +  +G   + +    
Sbjct: 288 NAGNNTEPSWSPDGSTIYFTSDRAGS--PQVYRMSSSGGGASPMGGSG 333



 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 55/134 (41%), Gaps = 6/134 (4%)

Query: 314 SQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           ++I +   R     +L V   +G +   I+  KE     P WSP G  +A+  F  +K  
Sbjct: 169 TKIAYVVQRGVSSYELRVSDYDGFNAFTITTSKE-PLMSPEWSPDGSRLAYVTFENKKAQ 227

Query: 373 IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETL 430
           + V        R++     +  AP++SP G  + F+  +DG+    +Y +    G    L
Sbjct: 228 VVVHDIRSGARRVVAALKGHNGAPSFSPDGSRIAFASNQDGE--LNIYVVGSGGGTPSKL 285

Query: 431 INTPAYASDPQWVG 444
                  ++P W  
Sbjct: 286 TANAGNNTEPSWSP 299


>gi|189346278|ref|YP_001942807.1| Tol-Pal system beta propeller repeat protein TolB [Chlorobium
           limicola DSM 245]
 gi|189340425|gb|ACD89828.1| Tol-Pal system beta propeller repeat protein TolB [Chlorobium
           limicola DSM 245]
          Length = 444

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 109/441 (24%), Positives = 192/441 (43%), Gaps = 24/441 (5%)

Query: 16  NLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAF----TKFVSIDELGGKVSEV 68
              +L  L   FF  ++HA      +A        +++       K      L   +  V
Sbjct: 16  AALVLTFLSFAFFSPALHAEASGEYIAIRKQGAGKIALVLDRSDAKGSKESGLAQNLDSV 75

Query: 69  VSKDLQRSDVFNLISQDSFKQKIT-NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           V + L  SD+F+++   S  +  +        F   +S+GA+V   G V ++   ++ ++
Sbjct: 76  VKEGLIFSDLFSVLPPPSNVRTGSEGKGLAVNFGALSSVGAEVYAGGTVSRKS-GKVNLD 134

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             ++D    K ++ K +  S    R + H    D+ + +TG+K  F S+I+FVS    S 
Sbjct: 135 MEVYDTFGTKLLMKKTYTGSEDQLRAMGHAFCADLIELLTGKKSYFGSKIVFVSNKTGS- 193

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                +   D DG  I+ LT  R  I   P FSP+  ++AY +Y       +Y+     +
Sbjct: 194 ---KEIYQCDFDGQGIQQLTNFRS-ISLTPVFSPDGTRLAYTSYTSGKP-TLYIRSMSDN 248

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                  N   + + P +  NG     ++  +   +IY +      + RLTN+  I++S 
Sbjct: 249 SIAAVGKN--GVSVDPGWR-NGSEVATTLSFEGDQEIYLIRSDGGISRRLTNSRGIDVSP 305

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD  Q+ F S R G  Q++V        +R++     +   P WSP GD IA++ + 
Sbjct: 306 TFSPDGKQMAFVSSRNGMPQIFVQDVQSGQTRRLTYSGRYN-TQPSWSPSGDKIAYSTWE 364

Query: 368 -GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              +  I V+  DGS  + L       ++P+WSP G  ++F+  + G  G KLY +   G
Sbjct: 365 KSGEINIFVINADGSGVKRLTSGVRENESPSWSPDGSMIVFTSNRQG--GKKLYVMSSTG 422

Query: 426 RNE-TLINTPAYASDPQWVGF 445
            ++  L+        P W  F
Sbjct: 423 GSQRRLLQMDGEQMQPSWSLF 443


>gi|82523864|emb|CAI78812.3| TolB protein [uncultured candidate division WS3 bacterium]
          Length = 464

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 107/436 (24%), Positives = 192/436 (44%), Gaps = 33/436 (7%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKV--ATNSANYSPVSIAFTKFVSIDE------LGG 63
             +    L   L     P  + A  ++    ++     + +   +F           L  
Sbjct: 23  TTRSTFLLAAFLAVAVVPAQVSAQREIYLGIHTTGAQRIQLLVDEFTCETGPLSIRVLAH 82

Query: 64  KVSEVVSKDLQRSDVFNLISQDSF-----KQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
           + SE++  DL  S +       +       Q +T+ D   RF             GR+  
Sbjct: 83  QASEILRNDLDTSGLIQTTGGSTLRQELGLQTLTSVDLKKRF--------DAATQGRLTV 134

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
           EG D + VE  L+DV   K +   +  +S +++R   H ++D   +++TGE G   ++I 
Sbjct: 135 EGSD-IVVEAELYDVPTEKMVASFRRRASESTFRSTIHQMADHFLRTLTGETGIAETKIA 193

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
            V E       +  +C MD DG N+  L  + D I   P +SP   +VAY +Y       
Sbjct: 194 VVREIGG----RMDICAMDYDGHNLVPLVENGD-INLLPAWSPLGNEVAYTSY-VGGEPA 247

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +Y+++       KR+     +  +  +S +GK    +  + +  +I+ V       +++T
Sbjct: 248 LYVLNLETG-VRKRLATPGGLNTSAAWSPDGKSLAFAATRGKDPEIFVVRRDGTVLDQIT 306

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               I+ S ++SP+  +I F SDR G  Q+YVM ++G++ +R++ +   S   P WSP G
Sbjct: 307 FHPAIDCSPTWSPNGHEIAFTSDRSGTPQIYVMSADGTNVRRLTYEGNYSD-SPAWSPSG 365

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           D IAFT   G +F I V+   G     L +   + + P W+P GR + +   + G   S 
Sbjct: 366 DRIAFTSRIGGRFRICVIAAQGGPVYPLTDGPGDHENPAWAPDGRHVAYVSNEGG--MSA 423

Query: 418 LYSIDLNGRNETLINT 433
           +Y ++ +G N   I++
Sbjct: 424 VYVVNADGTNRRRISS 439


>gi|21673468|ref|NP_661533.1| TolB protein, putative [Chlorobium tepidum TLS]
 gi|32699704|sp|Q8KEQ0|TOLB_CHLTE RecName: Full=Protein tolB; Flags: Precursor
 gi|21646573|gb|AAM71875.1| tolB protein, putative [Chlorobium tepidum TLS]
          Length = 434

 Score =  300 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 103/439 (23%), Positives = 186/439 (42%), Gaps = 26/439 (5%)

Query: 16  NLCLLLVLIGGFF-PTSIHAFV---KVATNSANYSPVSIAFTKFVSID----ELGGKVSE 67
             CL ++L G  F P ++ A      +A      S +++   K  +      E    +  
Sbjct: 8   FACLCIMLFGMLFVPFTLRAEEVGEYIAIRKEGASRIAVVLDKTSADGGKQREWARSLDV 67

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
            ++K L  + +FNL+      +   N      F    S+G  +   G V K    R  +E
Sbjct: 68  TINKGLDFTGLFNLLPAPLNIRNGQNGGL--NFASIASVGGDIYAGGSVTKRS-GRPVLE 124

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             ++D    K ++ + +    +  R I      D+ + +TG++  F +RI+FV+    + 
Sbjct: 125 MHVYD-SSGKSLLARTYTGEESQLRAIGLRFCADLVELLTGKRSVFGTRIVFVANRTGN- 182

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + + D DG N+  LT SR  I   P  SP+   +A+  Y       +Y+ +    
Sbjct: 183 ---KEIYMCDFDGENVVQLTNSRS-ISLTPAVSPDGTYIAWTDYTSGKP-NLYIKNIATG 237

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              K   N   + ++P +       + ++  +   D+Y +        RLT    I++S 
Sbjct: 238 A--KVSVNKHGVCISPAWRPGTNTLVTTLSYEGDQDLYLIRADGTVERRLTKGGGIDVSP 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD S++ F S R+G  Q+++   N    +R++     +   P WSP GD I ++   
Sbjct: 296 TFSPDGSKMAFVSTRQGGPQIFIQDMNSGQVRRLTYSGIYN-TQPSWSPNGDKILYSSMQ 354

Query: 368 -GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              +  I  +  DGS    L     N + P+WSP G  ++FS  +DG    +LY ++ +G
Sbjct: 355 KSGEINIFSINVDGSGLLQLTSGSGNNEHPSWSPDGSMIVFSSTRDGRR--RLYVMNADG 412

Query: 426 RNET-LINTPAYASDPQWV 443
            N+  L+N       P W 
Sbjct: 413 SNQRPLLNMQGEQQQPSWS 431



 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 6/178 (3%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G R +    +    +IY  D       +LTN+  I+++ + SPD + I +     GK  L
Sbjct: 170 GTRIVFVANRTGNKEIYMCDFDGENVVQLTNSRSISLTPAVSPDGTYIAWTDYTSGKPNL 229

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y+       +  +S +K      P W P  + +  T        + +++ DG+ ER L +
Sbjct: 230 YIKNIATGAK--VSVNKHGVCISPAWRPGTNTLVTTLSYEGDQDLYLIRADGTVERRLTK 287

Query: 389 DSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQWVG 444
              +  +PT+SP G  + F   + G  G +++  D+N G+   L  +  Y + P W  
Sbjct: 288 GGGIDVSPTFSPDGSKMAFVSTRQG--GPQIFIQDMNSGQVRRLTYSGIYNTQPSWSP 343


>gi|114776298|ref|ZP_01451343.1| translocation protein TolB precursor [Mariprofundus ferrooxydans
           PV-1]
 gi|114553128|gb|EAU55526.1| translocation protein TolB precursor [Mariprofundus ferrooxydans
           PV-1]
          Length = 421

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 116/435 (26%), Positives = 197/435 (45%), Gaps = 20/435 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGK---VSEVV 69
           M++   LLL L      ++           ++Y P+ +A        +  G    V +VV
Sbjct: 1   MRVFAFLLLFLATASHVSAA----DFDIYQSDYRPLQVALLV-EGEADAPGDRTMVRQVV 55

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           S DL  S  F  I   +F     +  +   + DW  +GA +L   ++       L+ +  
Sbjct: 56  SHDLASSQSFKPIDPMAFLVSPDSAPASVDYGDWRLIGADILAICKLRTV-NGVLQADVH 114

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           ++D    KQ++      S    R +AH ++D IYQ+  G  G F S +L+V++       
Sbjct: 115 VYDPFRGKQLLSLVLEGSKPGLRVLAHRVADQIYQAALGIPGYFTSHVLYVTKHGD---- 170

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            + L  MD+DGAN R +      +L  P +SP+  +VA  TY   +  R+   + R    
Sbjct: 171 LSDLVYMDQDGAN-RQVVGKNFTLLLSPDWSPDGNEVALNTY-VGNHPRLEFFNLRTGS- 227

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K  G F+ +   P FS +G+    ++     ++I+  D++       T+   I+ + ++
Sbjct: 228 RKAFGEFKGLNSTPEFSPDGRYVAATLSDKNDINIHIYDVKKGTWRAFTHGHAIDTTPTW 287

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   I F S+R GK Q+Y    +G   + +S     +   P WSP GD IA       
Sbjct: 288 SPDGKWIAFVSNRSGKPQIYRKPLSGGRAQLVSTSGTYN-TSPAWSPTGDRIAMISLKNW 346

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            FA+  +K DG+  R L     +++P+WS +G+ L++S ++ G    +LY +   G    
Sbjct: 347 SFAVATVKPDGTDIRYLATGKRVESPSWSSNGQMLLYSAEEHGIR--RLYRVPSWGGTPE 404

Query: 430 LINTPA-YASDPQWV 443
            + +PA  ASDP W 
Sbjct: 405 AVTSPAIDASDPAWS 419



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 63/177 (35%), Gaps = 5/177 (2%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              L   +  +  D+  +D      + +     + +S  +SPD +++   +      +L 
Sbjct: 160 SHVLYVTKHGDLSDLVYMDQDGANRQVVGKNFTLLLSPDWSPDGNEVALNTYVGNHPRLE 219

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                   +K    + +     P +SP G  +A T        I +        R     
Sbjct: 220 FFNLRTGSRKAF-GEFKGLNSTPEFSPDGRYVAATLSDKNDINIHIYDVKKGTWRAFTHG 278

Query: 390 SNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVG 444
             +   PTWSP G+ + F   + G    ++Y   L+G    L++T   Y + P W  
Sbjct: 279 HAIDTTPTWSPDGKWIAFVSNRSGK--PQIYRKPLSGGRAQLVSTSGTYNTSPAWSP 333



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 50/139 (35%), Gaps = 7/139 (5%)

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           S +++ +       L  M  +G++ +++          P WSP G+ +A   + G    +
Sbjct: 160 SHVLYVTKHGDLSDLVYMDQDGAN-RQVVGKNFTLLLSPDWSPDGNEVALNTYVGNHPRL 218

Query: 374 GVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-----DLNGRN 427
                     +   E       P +SP GR +  +     D    +Y +           
Sbjct: 219 EFFNLRTGSRKAFGEFKGLNSTPEFSPDGRYVAATLSDKNDINIHIYDVKKGTWRAFTHG 278

Query: 428 ETLINTPAYASDPQWVGFM 446
             +  TP ++ D +W+ F+
Sbjct: 279 HAIDTTPTWSPDGKWIAFV 297


>gi|78189865|ref|YP_380203.1| TolB protein, putative [Chlorobium chlorochromatii CaD3]
 gi|119371039|sp|Q3APB5|TOLB_CHLCH RecName: Full=Protein tolB; Flags: Precursor
 gi|78172064|gb|ABB29160.1| TolB protein, putative [Chlorobium chlorochromatii CaD3]
          Length = 440

 Score =  296 bits (759), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 102/442 (23%), Positives = 196/442 (44%), Gaps = 21/442 (4%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV----SIDELGGKVSE 67
           ++   L L   ++    P        +A   A  + +++    F     +   L  + + 
Sbjct: 10  HVTCALLLCTPMLALPHPIIAADTEYIAIRKAGSTSIALVLDTFEVTTGTSPALARQATT 69

Query: 68  VVSKDLQRSDVFNLI-SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           +V   L  + +F L+    + K       S   F+  +S+G      G +   G   + +
Sbjct: 70  LVRDGLDFTGLFTLLQPPLNVKTSSLFSSSTINFKALDSIGGAFYAVGTLSSSG-GEITL 128

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           + ++++V   K + GK++  + +  R ++H  S D+ + +TG+K  F S+I+F+S    S
Sbjct: 129 DGQVFEVATGKVLFGKRYRGTESQLRALSHAFSGDVVEFLTGKKSVFGSQIVFISNKSGS 188

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 +   D DGAN+  LT  R  I   P  SP+   +A+  +          +    
Sbjct: 189 ----KEIYSCDFDGANVHQLTNFRS-IALTPALSPDGAYLAFTDFTGGKP--ALAIRELA 241

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                R+   +   + P +  N +    +   +   ++Y +D      +RLT++  I++S
Sbjct: 242 TGKTTRVAK-KGNSIDPAWR-NSRELATTFSFEGDQELYLLDSAGAVKQRLTSSSGIDLS 299

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPD  ++ F S R G  Q++V   +    +R++     +   P WSP GD IAF+ +
Sbjct: 300 PTFSPDGRKMAFVSARSGNPQIFVYDFSSGKSQRLTFSGRYN-TQPAWSPIGDKIAFSTW 358

Query: 367 -SGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            SG +  I V+  DGS   +L  +    ++P+WSP GR ++F+  + G    KLY +  +
Sbjct: 359 ESGGEINIFVINTDGSGLTQLTTQSGENESPSWSPDGRMIVFASNRQG--VKKLYVMMAD 416

Query: 425 GRNET-LINTPAYASDPQWVGF 445
           G+N+  L+      + P W  F
Sbjct: 417 GKNQRPLLAIGGEQTQPSWSLF 438


>gi|289674677|ref|ZP_06495567.1| translocation protein TolB [Pseudomonas syringae pv. syringae FF5]
          Length = 312

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 87/317 (27%), Positives = 162/317 (51%), Gaps = 9/317 (2%)

Query: 14  KINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            INL   L+++  F    + A    + V + S   +P+++    +   + L   ++E++S
Sbjct: 1   MINLFRGLLVVLCFASAMVSAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIIS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L
Sbjct: 61  NDLRNSGYYAPIPKQNMISLPTQASEVI-FRDWKALGAQYVMVGNITPAG-GRLQIQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFF 295

Query: 310 SPDSSQIVFESDREGKE 326
             D S + F SDR GK 
Sbjct: 296 GKDGSTLYFTSDRGGKP 312



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 70/173 (40%), Gaps = 13/173 (7%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQK----DEAMDIYSVDLQSNATERLTNTLF 302
           D++ +++   +       FS+  +   ++ ++    +    +   D        L  +  
Sbjct: 148 DQSFEKLTGIKG-----AFST--RMLYVTAERFSENNTRYTLQRSDYDGARAVTLLQSRE 200

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             +S  ++PD  +I + S  + + +++V   +   +++I+ + E     P WSP G  +A
Sbjct: 201 PILSPRFAPDGKRIAYVSFEQKRPRIFVQHIDTGRREQIT-NFEGLNGAPAWSPDGSKLA 259

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT 414
           F         I V+     Q   +  DS++   P +   G +L F+  + G  
Sbjct: 260 FVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFFGKDGSTLYFTSDRGGKP 312



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 5/123 (4%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S+   +  L     +G+    + Q +E     P ++P G  IA+  F  ++  I V   D
Sbjct: 174 SENNTRYTLQRSDYDGARAVTLLQSRE-PILSPRFAPDGKRIAYVSFEQKRPRIFVQHID 232

Query: 380 GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYA 437
             +   +   +    AP WSP G  L F   KDG    ++Y I+L  R    + N  +  
Sbjct: 233 TGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDG--NPEIYVINLASRQLSRVTNDSSID 290

Query: 438 SDP 440
           ++P
Sbjct: 291 TEP 293



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +  ++ +     DG++   L++    + +P ++P G+ + +   +       +  ID 
Sbjct: 174 SENNTRYTLQRSDYDGARAVTLLQSREPILSPRFAPDGKRIAYVSFEQKRPRIFVQHID- 232

Query: 424 NGRNETLINTPAYASDPQWVG 444
            GR E + N       P W  
Sbjct: 233 TGRREQITNFEGLNGAPAWSP 253


>gi|322418108|ref|YP_004197331.1| Tol-Pal system beta propeller repeat-containing protein TolB
           [Geobacter sp. M18]
 gi|320124495|gb|ADW12055.1| Tol-Pal system beta propeller repeat protein TolB [Geobacter sp.
           M18]
          Length = 406

 Score =  296 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 192/423 (45%), Gaps = 35/423 (8%)

Query: 25  GGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID---ELGGKVSEVVSKDLQRSDVFNL 81
                 +   ++ V   ++    ++IA T  +S     E   ++ E+   DL  +  F +
Sbjct: 12  APQLGLAAEGYIDVTAPASGKMRLAIAPTTPLSGTVPAEAARELPELFGFDLGIAGPFEI 71

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
            S D                         L+         D + +E RL D    +++  
Sbjct: 72  TSSDPAGS--------------------ALLLKSAYGTEGDTVIIECRLVDQVRNREVTA 111

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
           K++       R++AH  SD++ +++TGEKG F  +I +VS+   +      + +MD DG 
Sbjct: 112 KRYSGRAKDLRRMAHAFSDEVLRALTGEKGPFTGKIAYVSKISGN----KEIFLMDYDGR 167

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N + LT +   I   P F+P+ +++ Y +Y   +   +Y  +        RI +   +  
Sbjct: 168 NPQRLTNNGS-INLYPDFAPSGKELIYTSYKKGNP-DLYRRELFTG-LEARISSRSGLNA 224

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              FS +G R  + + KD   ++Y +        RLT    I+IS S+SPD S++ F SD
Sbjct: 225 MGVFSPDGSRVALVLSKDGNSEVYQIARDGKEVARLTKNHAIDISPSWSPDGSRVAFVSD 284

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R GK QL+VM +NG + +R++     +   P WSP+GD I + +  G  F I  +  DGS
Sbjct: 285 RLGKPQLFVMDANGGNVRRLTTSGAYNVT-PRWSPKGDRIVYARKEGG-FQIYAINPDGS 342

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTPAYASDP 440
           Q+  L    + + P +SP GR ++FS  +DG  G  LY +  +G  +T I    A  + P
Sbjct: 343 QDTQLTSAGSNEHPRYSPDGRFIVFSSTRDGGEG--LYLMRADGTGQTRISPNKAQNTHP 400

Query: 441 QWV 443
            W 
Sbjct: 401 TWS 403


>gi|108760781|ref|YP_633893.1| tolB protein [Myxococcus xanthus DK 1622]
 gi|32699694|sp|Q84FF7|TOLB_MYXXA RecName: Full=Protein tolB; AltName: Full=Adventurous gliding
           motility protein W; Flags: Precursor
 gi|118574586|sp|Q1D0D0|TOLB_MYXXD RecName: Full=Protein tolB; Flags: Precursor
 gi|27804811|gb|AAO22855.1| adventurous gliding motility protein W [Myxococcus xanthus]
 gi|108464661|gb|ABF89846.1| tolB protein [Myxococcus xanthus DK 1622]
          Length = 431

 Score =  296 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 108/426 (25%), Positives = 192/426 (45%), Gaps = 24/426 (5%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFV----SIDELGGKVSEVVSKDLQRSDVFNLISQD 85
               A   +  + AN+ P+ +A    +        L        S DL  S +  ++ + 
Sbjct: 16  ALAQAP-TIEISGANFRPLPVAVPAPLTQNDGAKALVAPFDSAFSFDLTASGILQVLDRK 74

Query: 86  SFKQKITN--PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK 143
            F          +   F  W  +GA+ LV   + ++G   LR E RL++V   ++ +   
Sbjct: 75  GFTADAKEGMAAASINFSRWADVGAEALVKVSLAQDG-GVLRGELRLFNVGTGREDLKVS 133

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
             +   +   +AH ++D +Y+  T E   F SRI +V ++  +      + V D DG N 
Sbjct: 134 KDAPADNASLLAHRLADALYRHFTREPSPFLSRITYVRKAGTN----RDVYVADWDGGNA 189

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R LT     I   P  S +  +VA+ TY  ++   +Y+         K + +   M    
Sbjct: 190 RALTKG--GINILPALSQDGSQVAFTTYR-KNRPDIYVQSP--GGEAKAVISGGQMATGA 244

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDR 322
            FS +GKR   S+ + E+  +Y  +   +    LT+T   +N S ++SPD  +I F S+R
Sbjct: 245 AFSPDGKRIAYSLAEGESAQVYVANADGSGARALTDTPYGLNTSPTWSPDGKRIAFVSNR 304

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGS 381
            G  Q+Y+M ++G+  +R++     +   P WSP+GDLI FT       F +  +  +  
Sbjct: 305 GGSPQVYIMNADGTGVRRLTFQGNYNQT-PDWSPRGDLIVFTARDERNAFDLFTVSVETG 363

Query: 382 QERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASD 439
           +   L +D  + + P +SP+GR ++F+  ++G  GS+LY +  +G N+  + T       
Sbjct: 364 KVTRLTQDQGSNEEPAFSPNGRLIVFTSTRNG--GSQLYVMTADGNNQLPLRTEKGTYQT 421

Query: 440 PQWVGF 445
           P W   
Sbjct: 422 PDWSPL 427


>gi|189500640|ref|YP_001960110.1| WD40 domain-containing protein beta Propeller [Chlorobium
           phaeobacteroides BS1]
 gi|189496081|gb|ACE04629.1| WD40 domain protein beta Propeller [Chlorobium phaeobacteroides
           BS1]
          Length = 444

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 102/439 (23%), Positives = 180/439 (41%), Gaps = 20/439 (4%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSI--AFTKFVSIDELGGKVSEVVSKD 72
           I LC   ++    F   +  ++K+    A+  P+ +     +     +    +  V+   
Sbjct: 17  ILLCCFALMPSSLFGEPVKEYIKITKAGADRIPLVLRSVDVERSKDAQYANGIDRVIKNG 76

Query: 73  LQRSDVFNLISQDSFKQKITNPDSI----PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           L+ S +F +++         N          F   +S+GA+V   G V+K   + L ++ 
Sbjct: 77  LEFSGLFAILNSPMNLISGGNIYQTGKRQINFPALSSVGAEVYA-GGVLKRKGNTLHMDM 135

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            ++D    K ++ K +       R + H   DD+ +  TG+   F S+I +VS       
Sbjct: 136 EVYDALTGKLLMRKLYEGKREDTRSLGHRFCDDLVRLFTGKPSIFGSKIAYVSRR----N 191

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  + + D DG     +T +   +   P  S +  ++AY TY         L    + +
Sbjct: 192 GKKEIYLADFDGYGEVPVTRTG-GLALTPALSSDGSQLAYLTYTRGRP---DLQIKDLSK 247

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                   + + + P +         +   D   +IY V    +   RLT    I++S S
Sbjct: 248 KTVVSVTRKGVKIDPAWRKGSTELATTFSFDGNQEIYLVRKNGSIVRRLTRDRGIDLSPS 307

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS- 367
           +SPD   + F S R G  Q+++M  N    KR++   + +   P WSP  D IAFT    
Sbjct: 308 FSPDGRYMAFVSSRHGLPQVFIMDLNSGSTKRLTFKGKYN-TQPAWSPVNDKIAFTTMQK 366

Query: 368 GEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             +  I  +  DG+  + L       +AP+WSP G  ++FS  + G   SKLY ++ +GR
Sbjct: 367 NGEIDIFTVNADGTGLKQLTYRARQNEAPSWSPDGTMIVFSSSRGG--ASKLYVMNADGR 424

Query: 427 NETLINTPAYASDPQWVGF 445
           N+  +        P W  F
Sbjct: 425 NQRSLKLAGEQMQPCWSSF 443


>gi|193212307|ref|YP_001998260.1| Tol-Pal system beta propeller repeat protein TolB [Chlorobaculum
           parvum NCIB 8327]
 gi|193085784|gb|ACF11060.1| Tol-Pal system beta propeller repeat protein TolB [Chlorobaculum
           parvum NCIB 8327]
          Length = 434

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 102/440 (23%), Positives = 191/440 (43%), Gaps = 24/440 (5%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSE 67
           +++  + L  + +  F   +      +A        +SI      S      E    +  
Sbjct: 8   SVRTLIALFCLFMVPFTIRAEEVNEYIAIRKEGSGRISIILDHLKSNGGKESEWARSLDS 67

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
            +   L  + +FNL+      +   N           S+GA V V G V K+  D   ++
Sbjct: 68  TIQGGLDFTGLFNLMPAPLNIRNAQN--GALNLGAVRSIGADVFVGGSVTKQSGDP-AMQ 124

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            ++WDV   K ++ +K+     + R I      D+ + +TG++  F ++++FVS S    
Sbjct: 125 MQVWDV-TGKLLLNRKYSGQDKALRDIGLRFCADLVEMLTGKRSVFGTKMVFVSNSTG-- 181

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRI 246
             +  + + D DG NIR LT ++  I   P  SP+ + +A+  +      L +  + T  
Sbjct: 182 --QKEIYMCDFDGTNIRQLTNTKS-ISLTPSVSPDGRFLAWTDFSSGRPDLYIKNLSTGS 238

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             + K+    + + ++P +         ++  + + D+Y +        RLT    I +S
Sbjct: 239 TVSVKK----QGVCISPAWRPGTNECATTLSYEGSQDLYLIRADGTVARRLTRGHSIEVS 294

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK- 365
            S+SPD S++ F S REG  Q+++   +    +R++     +   P WSP GD I ++  
Sbjct: 295 PSFSPDGSKMAFVSTREGPPQIFIQDLSSGSVRRLTYSGTYN-TQPSWSPSGDKILYSSL 353

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               +  I ++  DGS    L   + N + P+WSP G  ++FS  + G    KLY ++++
Sbjct: 354 QKNGEINIFMINVDGSNLLQLTSGARNNEYPSWSPDGSMIVFSSTRAGSR--KLYVMNVD 411

Query: 425 GRNET-LINTPAYASDPQWV 443
           G N+  L+N       P W 
Sbjct: 412 GTNQRPLLNMKGEQQQPSWS 431



 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 6/178 (3%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G + +         +IY  D       +LTNT  I+++ S SPD   + +     G+  L
Sbjct: 170 GTKMVFVSNSTGQKEIYMCDFDGTNIRQLTNTKSISLTPSVSPDGRFLAWTDFSSGRPDL 229

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y+   +      +S  K+     P W P  +  A T        + +++ DG+  R L  
Sbjct: 230 YIKNLSTGST--VSVKKQGVCISPAWRPGTNECATTLSYEGSQDLYLIRADGTVARRLTR 287

Query: 389 DSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQWVG 444
             +++ +P++SP G  + F   ++G    +++  DL+ G    L  +  Y + P W  
Sbjct: 288 GHSIEVSPSFSPDGSKMAFVSTREGP--PQIFIQDLSSGSVRRLTYSGTYNTQPSWSP 343


>gi|310823648|ref|YP_003956006.1| protein TolB [Stigmatella aurantiaca DW4/3-1]
 gi|309396720|gb|ADO74179.1| Protein TolB [Stigmatella aurantiaca DW4/3-1]
          Length = 424

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 116/423 (27%), Positives = 194/423 (45%), Gaps = 25/423 (5%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFVSIDELG----GKVSEVVSKDLQRSDVFNLISQDSF 87
             A V +  + AN+ P+ +A+   + +D+ G        E    DL+ S +F ++ + SF
Sbjct: 17  AQAPV-IQISGANFRPLPLAYPAPLPVDDGGKKSSADFDEPFLFDLRASGLFQVLDRASF 75

Query: 88  KQKITN--PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF 145
                         F  W+ +GA+ LV  ++  EG   LR E RL++V   ++       
Sbjct: 76  TADAKEGITAGSINFTRWSDVGAESLVKVQLGAEG-GTLRGELRLFNVGSGREDFKASHA 134

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
              +  R++AH ++D +Y+ +T E   F SRI+FV ++  +      +   D DG N R 
Sbjct: 135 VPTSEPRQLAHFLADALYRHLTREPSPFLSRIVFVRKARDN----RDVWTADWDGNNARA 190

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           LT     I   P   P+   VA+ +Y         L   +     + I     M     F
Sbjct: 191 LTTG--GINLLPALGPDG-TVAFTSYRRGQP---DLYLQKEGGEARPIVQNGQMATGVAF 244

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREG 324
           S +GKR   +  + E+  IY  ++  +  +R+T+T   IN S S+SPD  ++ F S+R G
Sbjct: 245 SPDGKRIAYAQAQGESTQIYVANVDGSDAKRITDTPYGINSSPSWSPDGKRLAFVSNRGG 304

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQE 383
             Q+YVM  +G++ +R++     +   P WSP+GDLIAFT       F +  +  D  + 
Sbjct: 305 SPQIYVMNVDGTNARRLTFQGNYNQT-PDWSPRGDLIAFTARDERNAFDLFTVNVDTGKI 363

Query: 384 RLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQ 441
             L +D SN + P +SP+GR ++FS  + G    +L+ +   G N   +         P 
Sbjct: 364 TRLTQDQSNNEEPVFSPNGRLILFSSTRTGT--PQLFVMTAEGNNPLALPMGKGGGLTPD 421

Query: 442 WVG 444
           W  
Sbjct: 422 WAP 424


>gi|297568868|ref|YP_003690212.1| WD40 domain protein beta Propeller [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924783|gb|ADH85593.1| WD40 domain protein beta Propeller [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 431

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 94/427 (22%), Positives = 194/427 (45%), Gaps = 27/427 (6%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVS------IDELGGKVSEVVSKDLQRSDVFNLI 82
           P  + A + +   S     +++A    V         + G ++++++S+ ++       I
Sbjct: 21  PGQVAARIYLDITSPELRKIAMAIPPLVDRAKDDQPTDSGRQMADILSRAMELHGFSETI 80

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
               + ++        +  +W   GA+ ++ G   + G    ++E RL D+   + I G+
Sbjct: 81  DPKLYGER--------QDANWQRHGAEFVIQGSYREIG-GNFQLELRLLDINAGRMIHGR 131

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           ++ +     R+      D+  + +TG+KG  NS+I FVS++         + + D  G N
Sbjct: 132 RYQAPRELVRRQLLRYIDESVEVLTGKKGISNSKIAFVSDATG----HKEIHLADILGDN 187

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R +T     +   PRF+ + + + Y ++   +   +Y  + R  +  + I  +  + + 
Sbjct: 188 VRQVTR-HQYLAVSPRFTRDGEHLTYTSHHRGNA-NLYQTNIRELKTTRAISRWVGLNMT 245

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P ++ +  R ++++ +D   D+Y  +       RLT+   +N+S S+SPD  ++ F SDR
Sbjct: 246 PTWAPDDNRMVLTLSRDGNPDLYLTERTGKIIRRLTHGEGVNVSPSFSPDGRRLAFVSDR 305

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G  Q+Y+M       +R++     +   P WSP G  IA+T        I V+  +G  
Sbjct: 306 SGTPQIYLMDMRTMAIQRLTFQGHDN-TTPSWSPDGKWIAYTSRIDGVLHIAVISPEGGP 364

Query: 383 ERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI--NTPAYASD 439
            R +     + ++P+WSP  R L+F+R +      +L +I L+G    ++  +     S 
Sbjct: 365 PRQVTRTWGHHESPSWSPDSRQLVFARLRHDR--EELCAIFLDGSGLRVLFGDQSGNHSM 422

Query: 440 PQWVGFM 446
           PQW   +
Sbjct: 423 PQWSPRL 429


>gi|330896134|gb|EGH28355.1| translocation protein TolB [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 308

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 85/313 (27%), Positives = 160/313 (51%), Gaps = 9/313 (2%)

Query: 14  KINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
            INL   L+++  F    + A    + V + S   +P+++    +   + L   ++E++S
Sbjct: 1   MINLFRGLLVVLCFASAMVSAEEKNILVTSGSDRAAPIAVVPFGWQGGNVLPEDMAEIIS 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  +  I + +     T    +  F+DW +LGAQ ++ G +   G  RL++++ L
Sbjct: 61  NDLRNSGYYAPIPKQNMISLPTQASEVI-FRDWKALGAQYVMVGNITPAG-GRLQIQYAL 118

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GII 189
           ++V   +Q++      +    R +AH I+D  ++ +TG KG F++R+L+V+    S    
Sbjct: 119 FNVATEQQVLTGNVSGTNDQLRDMAHYIADQSFEKLTGIKGAFSTRMLYVTAERFSENNT 178

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L   D DGA    L  SR+ I   PRF+P+ +++AY +++ +   R+++      R 
Sbjct: 179 RYTLQRSDYDGARAVTLLQSREPI-LSPRFAPDGKRIAYVSFEQKRP-RIFVQHIDTGR- 235

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++I NF  +  AP +S +G +    + KD   +IY ++L S    R+TN   I+    +
Sbjct: 236 REQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFF 295

Query: 310 SPDSSQIVFESDR 322
             D S + F SDR
Sbjct: 296 GKDGSTLYFTSDR 308



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 69/169 (40%), Gaps = 13/169 (7%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQK----DEAMDIYSVDLQSNATERLTNTLF 302
           D++ +++   +       FS+  +   ++ ++    +    +   D        L  +  
Sbjct: 148 DQSFEKLTGIKG-----AFST--RMLYVTAERFSENNTRYTLQRSDYDGARAVTLLQSRE 200

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             +S  ++PD  +I + S  + + +++V   +   +++I+ + E     P WSP G  +A
Sbjct: 201 PILSPRFAPDGKRIAYVSFEQKRPRIFVQHIDTGRREQIT-NFEGLNGAPAWSPDGSKLA 259

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKK 410
           F         I V+     Q   +  DS++   P +   G +L F+  +
Sbjct: 260 FVLSKDGNPEIYVINLASRQLSRVTNDSSIDTEPFFGKDGSTLYFTSDR 308



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 5/123 (4%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S+   +  L     +G+    + Q +E     P ++P G  IA+  F  ++  I V   D
Sbjct: 174 SENNTRYTLQRSDYDGARAVTLLQSRE-PILSPRFAPDGKRIAYVSFEQKRPRIFVQHID 232

Query: 380 GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYA 437
             +   +   +    AP WSP G  L F   KDG    ++Y I+L  R    + N  +  
Sbjct: 233 TGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDG--NPEIYVINLASRQLSRVTNDSSID 290

Query: 438 SDP 440
           ++P
Sbjct: 291 TEP 293



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 2/81 (2%)

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +  ++ +     DG++   L++    + +P ++P G+ + +   +       +  ID 
Sbjct: 174 SENNTRYTLQRSDYDGARAVTLLQSREPILSPRFAPDGKRIAYVSFEQKRPRIFVQHID- 232

Query: 424 NGRNETLINTPAYASDPQWVG 444
            GR E + N       P W  
Sbjct: 233 TGRREQITNFEGLNGAPAWSP 253


>gi|187251684|ref|YP_001876166.1| putative component of the Tol biopolymer transport system
           [Elusimicrobium minutum Pei191]
 gi|186971844|gb|ACC98829.1| Putative component of the Tol biopolymer transport system
           [Elusimicrobium minutum Pei191]
          Length = 428

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 107/443 (24%), Positives = 209/443 (47%), Gaps = 23/443 (5%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSP-VSIAFTKF-VSIDELGGKV 65
            +++ + I L +LL+            ++ +A+   N  P + IA  K+     +   +V
Sbjct: 1   MKKIKLLI-LAMLLICTAAISYAQSDVYIGIASRGGNALPKLGIAQFKYDEGSKKAAAQV 59

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW-NSLGAQVLVTGRVIKEGKDRL 124
            +++  DL  S  F++  +     KI   + +   ++W  +  ++ ++ G V  EG+D  
Sbjct: 60  RDIMRADLMFSRHFDISEKGP---KIDTANIVKTLEEWQKNTFSEFVLYGEVSSEGED-F 115

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            +   +++  ++K +  + +     + R+++H  SD + + +TG++G  ++RI F + + 
Sbjct: 116 IINIFIYNTSEKKPVFARSYRGKENALRRLSHIASDQVVKELTGKRGIADTRIAFANSAT 175

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +      + + D DGAN++ LT  R  I   PR+S +  K+ Y +Y  ++     +   
Sbjct: 176 GN----KEIYIADYDGANLKKLTTDRS-IALLPRWSKDG-KIYYTSYRYKNPDVFSIDLA 229

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               +P  I   + + L    S +G+  +++        I+ ++L++  + +LT+   ++
Sbjct: 230 AGKVSPVAIT--KGLELIGGVSPDGRSIILTRSGGTNPSIFEINLETGKSVQLTDKAGVD 287

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S SYSPD   I F S+R G  Q+YVM       +RI+     +   P WSP G+ I F 
Sbjct: 288 GSPSYSPDGRFITFVSNRSGNPQIYVMDLQNGSTRRITSSLNWADT-PQWSPTGEWIVFA 346

Query: 365 KFSG--EKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +       I ++   G+Q R L  DS N + PTWSP GR + F+  + G    +LY +
Sbjct: 347 GRTAAQNPIDIFLVDITGTQIRQLTSDSANNEDPTWSPDGRFIAFTTTRKGRR--QLYVM 404

Query: 422 DLNGRNETLI-NTPAYASDPQWV 443
           D +G    L+ + P  +  P W 
Sbjct: 405 DADGSAPHLLADIPGNSYTPHWS 427


>gi|255020046|ref|ZP_05292119.1| tolB protein precursor, periplasmic protein involved in the
           tonb-independent uptake of group A colicins
           [Acidithiobacillus caldus ATCC 51756]
 gi|254970575|gb|EET28064.1| tolB protein precursor, periplasmic protein involved in the
           tonb-independent uptake of group A colicins
           [Acidithiobacillus caldus ATCC 51756]
          Length = 436

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 104/433 (24%), Positives = 190/433 (43%), Gaps = 14/433 (3%)

Query: 12  NMKINLCLLLVLIGGFFPTS-IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
             +  L   ++L G         A + V    A  S   +A   F +       ++++V 
Sbjct: 13  PRRPFLARAVLLCGTLALAPLAQATLLVHVAKAVRSSDPVAVPDFGAGPAGQPSIAQIVR 72

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
           +DL+ S  F++I+ D +         +     W   GA  LV G V   G+D  RV+  +
Sbjct: 73  QDLRYSGYFHVIAPDLYPADPHAVRGLSS-TAWTKTGALTLVLGSVQSAGQD-YRVQAYV 130

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
            ++ D K I  ++F  + AS+ ++   +++ +Y+++TG  G F   I FV         +
Sbjct: 131 VNLLDDKVIAARRFSGAAASYHQMGQDVANLVYRAVTGHPGPFRGHIAFVDARGG----Q 186

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L V   DG + R +   R  ++  P +SP    +AY +Y  +  + +Y+ + R  +  
Sbjct: 187 FRLQVAASDGWHPRTVLRGRIPVI-SPAWSPGHGHLAYVSYRHQHSV-IYIQNLRNGQRR 244

Query: 251 KRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           +  G   +   AP +S  G     + V      +I  ++L       LT    +N S  +
Sbjct: 245 EVPG-HGAAQSAPAYSPGGHYLAFARVWGHGRTEIVRLNLADGQERVLTREGTVNTSPVW 303

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +P    I+F S+R+G  Q++ M  NG   +R+S +   +   P  SP G  I F      
Sbjct: 304 TPSGRHILFVSNRDGSAQIFQMNRNGGGVRRLSFNGGYNV-SPAISPNGRWIGFIHADAG 362

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             ++ VM + G   R+L   +N + P+++P GR L+F+  + G     L  + +NG+   
Sbjct: 363 ILSLAVMDRQGGDLRVLYAGANCERPSFAPDGRMLLFNTHQGGRK--VLAEVAINGKGLH 420

Query: 430 LINTPAYASDPQW 442
            +  P  A++  W
Sbjct: 421 FLQLPGQANEGSW 433



 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 12/186 (6%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                  +     +            +       IS ++SP    + + S R     +Y+
Sbjct: 176 HIAFVDARGGQFRLQVAASDGWHPRTVLRGRIPVISPAWSPGHGHLAYVSYRHQHSVIYI 235

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVED 389
                  Q+R      A+   P +SP G  +AF +  G  +  I  +     QER+L  +
Sbjct: 236 QNLRNG-QRREVPGHGAAQSAPAYSPGGHYLAFARVWGHGRTEIVRLNLADGQERVLTRE 294

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQ 441
             +  +P W+PSGR ++F   +DG   ++++ ++ NG     ++       +PA + + +
Sbjct: 295 GTVNTSPVWTPSGRHILFVSNRDGS--AQIFQMNRNGGGVRRLSFNGGYNVSPAISPNGR 352

Query: 442 WVGFMD 447
           W+GF+ 
Sbjct: 353 WIGFIH 358


>gi|317051744|ref|YP_004112860.1| TolB protein [Desulfurispirillum indicum S5]
 gi|316946828|gb|ADU66304.1| TolB protein [Desulfurispirillum indicum S5]
          Length = 452

 Score =  289 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 107/440 (24%), Positives = 202/440 (45%), Gaps = 18/440 (4%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAF-VKVATNSANYSPVSIAFTKFVSIDELG----GKVS 66
            +   L   L+L G        +    +       + + IA   F S + L       + 
Sbjct: 17  RILCALATALILTGVATADVAESEAFAIEVRPTGITSIPIAIPTFTSDNSLSAEFRENMR 76

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            ++ +DL  + +  ++ ++++  +   PD    ++DW  +GA+ + +  +   G   LR 
Sbjct: 77  ALILEDLSYAGIIKVLPREAYLAEPGRPD--VNYEDWLFIGAEFMASVSLFSTGT-HLRA 133

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E  ++D+  +++   + F  +   +  +AH ++D I   ++G +G F +RI FVS+   S
Sbjct: 134 EVAVYDMAMKRKKSKQSFEIAFDRYVTLAHRLADHILYEVSGVQGFFEARIAFVSDRTSS 193

Query: 187 -GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
              +  ++  MD DG+N++ +T   D I   P +  +  KVA+ +Y       + L D +
Sbjct: 194 ANAVSKNIYAMDFDGSNLQPVTT-NDSININPFW-HSMSKVAFTSY-IRQRPEILLRDLQ 250

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R    +  F         S +GK   ++   +   +IY +        +LT    I++
Sbjct: 251 SGR-TALLAAFGGTNTGGIPSPDGKYIAVTASHNGISNIYLLHSDGRMYRQLTRHWSIDV 309

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++SPD + I F SDR G  Q+Y++     +  R++ +   +   PVWSP G+ IA+T 
Sbjct: 310 SPAWSPDGNFIAFVSDRPGSPQVYMINLRTDEITRVTYEGRYNV-SPVWSPDGNYIAYTS 368

Query: 366 FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               KF I +++KDG   + L     + + P WS  G  L+F+  + G+   KLY +D  
Sbjct: 369 LEENKFNIYIVEKDGYNPQRLTYNSGHNETPRWSRDGNYLLFTSNRTGEF--KLYVMDRT 426

Query: 425 GRNETLI-NTPAYASDPQWV 443
           G  +  + + PA  + P WV
Sbjct: 427 GTFQKRLKDGPANNNMPDWV 446


>gi|262193458|ref|YP_003264667.1| hypothetical protein Hoch_0133 [Haliangium ochraceum DSM 14365]
 gi|262076805|gb|ACY12774.1| WD40 domain protein beta Propeller [Haliangium ochraceum DSM 14365]
          Length = 445

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 106/426 (24%), Positives = 196/426 (46%), Gaps = 19/426 (4%)

Query: 25  GGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS-EVVSKDLQRSDVFNLIS 83
           G    ++  + V +   +       IA  + V+ D    + + +V+  DL  S  F ++ 
Sbjct: 28  GPARSSAQQSGVVIELENPKRGLYPIAIPRSVAADAAQAEEAQKVMDFDLAVSGWFEVLD 87

Query: 84  QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ-IIGK 142
             SF   +       + Q W  +GA  ++  R+ + G ++   E RL++V+     ++ K
Sbjct: 88  PRSFLADLRTEGLGIQPQKWKDVGAFGVIKHRISRSG-NQYTFEGRLYEVEKGSAAVLIK 146

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +       R + H   +D+ +  TGE+G F S++ FV+     G     +  MD DG  
Sbjct: 147 TYRGG--DLRALVHNFCNDVVEHYTGERGFFGSKMAFVT----RGSGGKQVMAMDFDGHG 200

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R LT +    +  P +SP+  KVA+ +Y   +   +Y++     R P RI     M   
Sbjct: 201 VRSLTRNSSLNIL-PSWSPDGSKVAFTSY-MRNNPDLYVVGAGGGR-PNRISKQSGMNTG 257

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESD 321
             +S +G +  +++ KD   +IY +   S A  +RLTN   I+ S ++SPD  +I F SD
Sbjct: 258 ASWSPDGSKIAVTLSKDGNPEIYIISASSGAILQRLTNDRAIDTSPAWSPDGREIAFVSD 317

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKD 379
           R G  Q++VM + G   +R+S++   +   PVWSP     ++A+T   G  F I  +   
Sbjct: 318 RHGGPQIFVMSAAGGSPRRVSRNGSYN-TTPVWSPRKDKRMLAYTTRDGGTFDIVTLDLG 376

Query: 380 GSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                 + +   + + P++SP+GR++ F+ ++    G+ +Y  + +G           A+
Sbjct: 377 TGDMVRITQGQGSNEEPSFSPNGRAIAFASER--REGAGIYIANADGSGTQRRVYSGVAT 434

Query: 439 DPQWVG 444
              W  
Sbjct: 435 SIDWGP 440


>gi|226942085|ref|YP_002797159.1| TolB [Laribacter hongkongensis HLHK9]
 gi|226717012|gb|ACO76150.1| TolB [Laribacter hongkongensis HLHK9]
          Length = 308

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 90/313 (28%), Positives = 164/313 (52%), Gaps = 9/313 (2%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           DV  ++Q+ G  F   P   R++AH I+D IY++ITG+KG F +RI++V++    G    
Sbjct: 2   DVNQKRQLTGGSFAIEPKQGRQLAHLIADMIYEAITGQKGIFGTRIVYVAQQ---GRNSY 58

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V D DGA  + L  S++  L  P +SP+  +VAY +++ +  + VY+ +     A +
Sbjct: 59  ELRVADADGAGEQTLLRSKEP-LMSPVWSPDGSRVAYVSFETKKPV-VYVHNVATG-ARR 115

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            + NF+    AP +S +G R  +++       IY V        RLT +  I+   +++P
Sbjct: 116 AVANFKGSNSAPAWSPDGTRLAVALTLSGNTQIYLVGADGGTPRRLTQSQGIDTEPAFTP 175

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D S+I+F SDR G  Q+Y M ++G    R++ +   +   P  SP G   AF +  G ++
Sbjct: 176 DGSRILFTSDRAGGPQIYSMPASGGPATRLTYEGNYNV-SPAVSPDGKSFAFVRREGGRY 234

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            + V +   SQ   + +    ++P+++P+G+ ++F+ ++ G     LY++  +G  +T +
Sbjct: 235 RVMVQQFGSSQANYVSDTQFDESPSFAPNGKMILFASEQGGRG--VLYTVTADGLTKTRL 292

Query: 432 NTPAYASDPQWVG 444
                  +P W  
Sbjct: 293 GASGDVMEPDWGP 305


>gi|153826263|ref|ZP_01978930.1| tolB protein [Vibrio cholerae MZO-2]
 gi|149740028|gb|EDM54203.1| tolB protein [Vibrio cholerae MZO-2]
          Length = 328

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 80/334 (23%), Positives = 155/334 (46%), Gaps = 9/334 (2%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G++ +     L  + +L  +     +  K      +  R+ AH I+D +Y+ +TGE+G F
Sbjct: 3   GQLTQGQSKALSQDGQLV-LSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGERGAF 61

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +RI +V  +         L + D DG N R +  S+ Q L  P +SP+ Q +AY ++ +
Sbjct: 62  LTRIAYVVVN-DKDPYPYQLRIADYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYVSFQN 119

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                +Y+M+    +  +++ +F     APRFS +GK   + + K   + +Y++DL +  
Sbjct: 120 GQA-EIYMMNIYSGK-REKLTSFPRHNGAPRFSPDGKTLALVLSKTGNLQVYTMDLATRR 177

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              +T+    N    + PD   ++F SDR GK Q+Y +  +G + KR++     +     
Sbjct: 178 LTEVTSGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYQVNLSGGETKRLTWQGSQNLGGQ- 236

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            +P G  +     S   F +     +    ++L +    ++P+ +P+G  +I+S   +  
Sbjct: 237 ITPDGKFLVMVNRSDSGFNLAKQDLETGAMQILTKTLLDESPSIAPNGGMVIYSSIYN-- 294

Query: 414 TGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
             + L  + ++GR +  L  T      P W  F+
Sbjct: 295 KANVLSMVSIDGRFKARLPATNGRVRAPAWSPFL 328


>gi|319760470|ref|YP_004124408.1| protein TolB [Candidatus Blochmannia vafer str. BVAF]
 gi|318039184|gb|ADV33734.1| protein TolB [Candidatus Blochmannia vafer str. BVAF]
          Length = 460

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 101/454 (22%), Positives = 181/454 (39%), Gaps = 36/454 (7%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI----------DELGGKVSEV 68
             L+ I      S  + +K+       +   IA   F +           +     +  +
Sbjct: 5   FFLLSILLSTSFSAISDMKIEITHGVNTAYPIAVVPFSTTYMKHNNILNNNNNIENIGSI 64

Query: 69  VSKDLQRSDVFNLISQDSFKQKITN-PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           ++ DL+ S  FN +       + +   D +P F  W  LG   +V G +  +  D   + 
Sbjct: 65  IAADLRNSGKFNTLPISFLPHQPSKLSDIVPMF--WKKLGINTIVLGSINIDCNDNYLIT 122

Query: 128 FRLWDVKDRKQ--IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           ++L D        I+  ++       R  AHTIS++I++ +TG KG F +RI +VS  + 
Sbjct: 123 YQLIDTSSNPALIILENQYLIKKKYTRCAAHTISNEIFEKLTGIKGAFCTRIAYVSY-IH 181

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +      L V D DG N   +  S +  L  P ++P+ +K+AY  +       V  + T 
Sbjct: 182 NTKYPYELYVADYDGYNQISICRSAEP-LMSPAWTPDGKKIAYVAFSSGHSELV--VQTL 238

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  I  F +   AP FS +G++   S  K  ++++Y + L S    ++T+    N 
Sbjct: 239 GTGLINHIIKFPNHNGAPAFSPDGEKLAFSSSKTGSLNLYVMYLSSGKICQITSNRHNNT 298

Query: 306 SASYSPDSSQIVFESDREGKEQLYV-MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S+ PD++ + + SD+ G  Q+Y    +N  D +RIS     S   P  S  G+ I   
Sbjct: 299 EPSWFPDNTNLAYTSDQGGIPQIYKININNIIDNQRISWL-PGSNQKPNISSDGNFIIMV 357

Query: 365 KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR-------------KK 410
                +  I  +     +E +L +       P+ +P+   +I+S                
Sbjct: 358 NRYKGQQNISKLDLLTEKEEILTKRSFLADTPSIAPNEIMIIYSSILKKSTSVSIIHDND 417

Query: 411 DGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWV 443
           + +  S L  I ++G  +  L         P W 
Sbjct: 418 ENNEKSVLELISVDGHFKANLKGASGSLRFPVWS 451


>gi|42521812|ref|NP_967192.1| adventurous gliding motility protein W [Bdellovibrio bacteriovorus
           HD100]
 gi|67461965|sp|Q6MRB2|TOLB_BDEBA RecName: Full=Protein tolB; Flags: Precursor
 gi|39574342|emb|CAE77846.1| Adventurous gliding motility protein W [Bdellovibrio bacteriovorus
           HD100]
          Length = 461

 Score =  283 bits (723), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 116/465 (24%), Positives = 204/465 (43%), Gaps = 43/465 (9%)

Query: 18  CLLLVLIGGFFPTSIHAF----VKVATNSANYSPVSIAFTKFVSIDE---------LGGK 64
            L L LI G FP   HA     + +    A      +AF                 +G +
Sbjct: 5   ILALALIIGLFPLFSHAQNNNGIYIKLGEARTKKSLMAFPPLQYTGSPSTASRNQGVGVE 64

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP--------RFQDWNSLGAQVLVTGRV 116
           +   ++ DL  S  F  I+Q +F +  +    +P        +FQ W+S+GA  L+    
Sbjct: 65  IFNTITNDLTVSSYFQFINQSAFLEDTSKTGLMPAPGLPNGFKFQSWSSIGADFLIRAGY 124

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
              G + + +E   + V     ++GKK+    +S R+IAHT ++D+ +++TG +G F SR
Sbjct: 125 SVVG-NEVTLETYTYHVPRAALVLGKKYKGPTSSARRIAHTFANDVMKALTGVEGPFLSR 183

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY----D 232
           ++  S+          +  MD DGAN+  ++  R  I   P +SP+ +K+AY +Y     
Sbjct: 184 VVVSSDKGSG--QSKEIFTMDWDGANMEQVSNHRS-ISISPAWSPDGKKIAYTSYVKRVG 240

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +      L+          I   + +     FS++GK   +++ +  + DIY + L   
Sbjct: 241 AKFRNADMLLLDLTTGKRSLISYRQGINSGASFSADGKHIYLTISQGNSPDIYKMGLDGT 300

Query: 293 ATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              ++TN     +N+  + SP    + F SDR G+  +Y   + G++ KRI+     +  
Sbjct: 301 LVGKITNGPAGALNVEPTVSPQG-LLSFSSDRAGRPMIYTADAAGNNVKRITFAGVFN-S 358

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-------SNLQAPTWSPSGRS 403
            P WSP G  IAF   S   F I VM  DG+    L          ++ + P++SP GR 
Sbjct: 359 SPSWSPDGKKIAFAGQSDNNFDIFVMNADGTGMIRLTSAKKPNGRMASNEDPSFSPDGRF 418

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQWVGFMD 447
           ++++  + G    ++Y   ++G  E  +         P+W   +D
Sbjct: 419 VMYTSNRTGKN--QIYISTVDGTEERRVTNDNNNYYKPKWSNNID 461


>gi|78186497|ref|YP_374540.1| TolB protein, putative [Chlorobium luteolum DSM 273]
 gi|78166399|gb|ABB23497.1| TolB protein, putative [Chlorobium luteolum DSM 273]
          Length = 449

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 107/444 (24%), Positives = 197/444 (44%), Gaps = 26/444 (5%)

Query: 12  NMKINLCLLLVLIGGF-FPTSIHAFV--KVATNSANYSPVSIAFTKFVSIDELG----GK 64
           ++++   LLL  I  F FP S  A     +A        +++   K ++          +
Sbjct: 17  SIRLTAALLLAFIACFSFPLSAMALEGEYIAIRKEGAGRIALVLGKPLAEGGKASAWSAE 76

Query: 65  VSEVVSKDLQRSDVFNLISQD-SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           +   + + L  + +FN+I    +  +   +      F   NS+GA++   G +  E   R
Sbjct: 77  LDREIREGLAFTGIFNMIPPPLNLFETGGSGKRTLNFGALNSIGAEIFAGGSLASEA-GR 135

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           +++   +++    K I+ K +   P   R IAH    D+ + +TG +  F S I+FVS  
Sbjct: 136 VKLSMAVYETFGAKPILSKTYSGRPDELRTIAHAFCADLVKLLTGRRSVFGSNIVFVSNR 195

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLM 242
                    +     DG ++  LT SR  I   P  SP+  ++A+  Y      L++  M
Sbjct: 196 ----SGFKEIYSCAFDGGSLSQLTRSRS-ISLTPALSPDGTRLAFTDYTSGRPGLKIMNM 250

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             R   A ++      + + P + SNG     ++  +   DIY V      + ++T++  
Sbjct: 251 ADRRISAVRQ----SGVSIDPGWRSNG-EVATTLSFEGDQDIYLVRPDGTLSRKVTSSRG 305

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I++S S+SPD +++ F S R G  Q++++       +R++ +   +   P WSP GD IA
Sbjct: 306 IDLSPSFSPDGTKMAFVSARFGNPQVFILDLGTGQTRRLTYNGNYN-TQPSWSPGGDKIA 364

Query: 363 FTKFS-GEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +T      +  I  ++ DGS    L   +   ++P+WSP G  ++F+  + G    KLY 
Sbjct: 365 YTTMEKNGEINIFTIRPDGSGATRLTSGARENESPSWSPGGDMIVFTSGRQGQK--KLYV 422

Query: 421 IDLNGRNE-TLINTPAYASDPQWV 443
           ++ NG N+  L+        P W 
Sbjct: 423 MNANGDNQRRLLQMEGEQMQPSWS 446



 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 76/219 (34%), Gaps = 44/219 (20%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   +    +    +IYS      +  +LT +  I+++ + SPD +++ F     G+  L
Sbjct: 186 GSNIVFVSNRSGFKEIYSCAFDGGSLSQLTRSRSISLTPALSPDGTRLAFTDYTSGRPGL 245

Query: 329 YVMQS---------------------NGSDQKRISQDKE--------------------A 347
            +M                       NG     +S + +                     
Sbjct: 246 KIMNMADRRISAVRQSGVSIDPGWRSNGEVATTLSFEGDQDIYLVRPDGTLSRKVTSSRG 305

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIF 406
               P +SP G  +AF         + ++     Q R L  + N    P+WSP G  + +
Sbjct: 306 IDLSPSFSPDGTKMAFVSARFGNPQVFILDLGTGQTRRLTYNGNYNTQPSWSPGGDKIAY 365

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASD-PQWVG 444
           +  +  +    +++I  +G   T + + A  ++ P W  
Sbjct: 366 TTMEK-NGEINIFTIRPDGSGATRLTSGARENESPSWSP 403


>gi|194337187|ref|YP_002018981.1| WD40 domain protein beta Propeller [Pelodictyon phaeoclathratiforme
           BU-1]
 gi|194309664|gb|ACF44364.1| WD40 domain protein beta Propeller [Pelodictyon phaeoclathratiforme
           BU-1]
          Length = 440

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/451 (23%), Positives = 186/451 (41%), Gaps = 22/451 (4%)

Query: 2   SLRFFIAEELNMKINLCLLLVL-IGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
            +RFF      + + L  LLV  +      +      +A        + +   K  +  +
Sbjct: 1   MVRFFKHVFSGIFVALFFLLVFPLHLCAGETGETGEYIAIRKEGSGNIVLVLDKLHADGK 60

Query: 61  ----LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP-RFQDWNSLGAQVLVTGR 115
                G  +  V+   L  + +F+++         ++  S+   F    S+GA+V   G 
Sbjct: 61  KESRFGQGLDTVMHDGLDFAGIFSMLPPPLNIMDNSDKKSVVINFGALTSVGAEVYAGGT 120

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V  +    + ++  +++    + ++ K +       R I H    D+   +TG+   F S
Sbjct: 121 VTIKS-GMINLDMSVYETAGSRLLLRKTYTGKEDELRSIGHAFCADLVALLTGKSSVFGS 179

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           +I+FVS +         +   D DG  +  LT SR  I   P  SP+ + +AY  +    
Sbjct: 180 KIVFVSNNTG----YKEIYQCDFDGYGVEQLTNSRS-ITMNPSLSPDGRHLAYIDFSSGR 234

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              V  +    +R    +GN   + + P + S G     ++  D    IY V      + 
Sbjct: 235 --SVLRIQNLGERKTASVGNS-GVSIDPAWRS-GSEVAATLSFDGNQQIYLVKTDGTLSR 290

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           RLTN+  I+IS ++SPD S++ F S R G  Q+++        KR++     +   P WS
Sbjct: 291 RLTNSRSIDISPAFSPDGSKMAFVSSRNGLPQIFIQDIQSGQVKRLTFSGRYN-TQPSWS 349

Query: 356 PQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGD 413
           P GD IA+T +    +  I  +  DGS    L         P+WSP G+ ++FS  + G 
Sbjct: 350 PAGDKIAYTTWEKNGEINIFTVSADGSGLMQLTRRCGENICPSWSPDGQMIVFSSNRSGK 409

Query: 414 TGSKLYSIDLNGRNET-LINTPAYASDPQWV 443
              KLY++D  G  +  L+      + P W 
Sbjct: 410 Q--KLYTMDSKGDKQRALLQVDGQQTQPSWS 438



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 74/178 (41%), Gaps = 7/178 (3%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G + +         +IY  D      E+LTN+  I ++ S SPD   + +     G+  L
Sbjct: 178 GSKIVFVSNNTGYKEIYQCDFDGYGVEQLTNSRSITMNPSLSPDGRHLAYIDFSSGRSVL 237

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +      ++K  S        DP W   G  +A T        I ++K DG+  R L  
Sbjct: 238 RIQNL--GERKTASVGNSGVSIDPAWRS-GSEVAATLSFDGNQQIYLVKTDGTLSRRLTN 294

Query: 389 DSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
             ++  +P +SP G  + F   ++G    +++  D+ +G+ + L  +  Y + P W  
Sbjct: 295 SRSIDISPAFSPDGSKMAFVSSRNG--LPQIFIQDIQSGQVKRLTFSGRYNTQPSWSP 350


>gi|118574590|sp|Q3B584|TOLB_PELLD RecName: Full=Protein tolB; Flags: Precursor
          Length = 436

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 107/444 (24%), Positives = 197/444 (44%), Gaps = 26/444 (5%)

Query: 12  NMKINLCLLLVLIGGF-FPTSIHAFV--KVATNSANYSPVSIAFTKFVSIDELG----GK 64
           ++++   LLL  I  F FP S  A     +A        +++   K ++          +
Sbjct: 4   SIRLTAALLLAFIACFSFPLSAMALEGEYIAIRKEGAGRIALVLGKPLAEGGKASAWSAE 63

Query: 65  VSEVVSKDLQRSDVFNLISQD-SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           +   + + L  + +FN+I    +  +   +      F   NS+GA++   G +  E   R
Sbjct: 64  LDREIREGLAFTGIFNMIPPPLNLFETGGSGKRTLNFGALNSIGAEIFAGGSLASEA-GR 122

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           +++   +++    K I+ K +   P   R IAH    D+ + +TG +  F S I+FVS  
Sbjct: 123 VKLSMAVYETFGAKPILSKTYSGRPDELRTIAHAFCADLVKLLTGRRSVFGSNIVFVSNR 182

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLM 242
                    +     DG ++  LT SR  I   P  SP+  ++A+  Y      L++  M
Sbjct: 183 ----SGFKEIYSCAFDGGSLSQLTRSRS-ISLTPALSPDGTRLAFTDYTSGRPGLKIMNM 237

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             R   A ++      + + P + SNG     ++  +   DIY V      + ++T++  
Sbjct: 238 ADRRISAVRQ----SGVSIDPGWRSNG-EVATTLSFEGDQDIYLVRPDGTLSRKVTSSRG 292

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I++S S+SPD +++ F S R G  Q++++       +R++ +   +   P WSP GD IA
Sbjct: 293 IDLSPSFSPDGTKMAFVSARFGNPQVFILDLGTGQTRRLTYNGNYN-TQPSWSPGGDKIA 351

Query: 363 FTKFS-GEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +T      +  I  ++ DGS    L   +   ++P+WSP G  ++F+  + G    KLY 
Sbjct: 352 YTTMEKNGEINIFTIRPDGSGATRLTSGARENESPSWSPGGDMIVFTSGRQGQK--KLYV 409

Query: 421 IDLNGRNE-TLINTPAYASDPQWV 443
           ++ NG N+  L+        P W 
Sbjct: 410 MNANGDNQRRLLQMEGEQMQPSWS 433



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 76/219 (34%), Gaps = 44/219 (20%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   +    +    +IYS      +  +LT +  I+++ + SPD +++ F     G+  L
Sbjct: 173 GSNIVFVSNRSGFKEIYSCAFDGGSLSQLTRSRSISLTPALSPDGTRLAFTDYTSGRPGL 232

Query: 329 YVMQS---------------------NGSDQKRISQDKE--------------------A 347
            +M                       NG     +S + +                     
Sbjct: 233 KIMNMADRRISAVRQSGVSIDPGWRSNGEVATTLSFEGDQDIYLVRPDGTLSRKVTSSRG 292

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIF 406
               P +SP G  +AF         + ++     Q R L  + N    P+WSP G  + +
Sbjct: 293 IDLSPSFSPDGTKMAFVSARFGNPQVFILDLGTGQTRRLTYNGNYNTQPSWSPGGDKIAY 352

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASD-PQWVG 444
           +  +  +    +++I  +G   T + + A  ++ P W  
Sbjct: 353 TTMEK-NGEINIFTIRPDGSGATRLTSGARENESPSWSP 390


>gi|51246264|ref|YP_066148.1| TolB protein [precursor] [Desulfotalea psychrophila LSv54]
 gi|67461948|sp|Q6AKI4|TOLB_DESPS RecName: Full=Protein tolB; Flags: Precursor
 gi|50877301|emb|CAG37141.1| related to TolB protein [Precursor] [Desulfotalea psychrophila
           LSv54]
          Length = 438

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 110/433 (25%), Positives = 202/433 (46%), Gaps = 27/433 (6%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG------GKVSEVVSKD 72
           ++ VL  G         V +   +     + +A   F +  E G        +++ V+K 
Sbjct: 22  MISVLGNGIGQAMAADRVYLDITAPETRKIKVAVPWFTNTGEGGMKARIAKDIADTVAKA 81

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+   + ++I    +K + T         DW  LGA   V G      K ++++E RL D
Sbjct: 82  LKFHGIISIIPTSEYKGRQT--------ADWAKLGADYAVLGSYKMFPK-KIKLEIRLLD 132

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V +   I+GK +  S +    +     D   +S+TG +G  +SRI FVS           
Sbjct: 133 VAENNIILGKSYKGSMSQQNPMIFKFCDAAIKSLTGTEGIASSRIAFVSYE----KRTKD 188

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D  G  IR +T   + ++  PRF+ +   ++Y++Y      ++Y+ D R  +  K 
Sbjct: 189 VFMTDILGRRIRQVTRHNN-LVVSPRFTRDGNFLSYSSYHSGS-QKLYITDLRQAKITKS 246

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +   + M LAP ++ +GK  ++++ K  A D++ ++ Q    E+LT+   +N+S +YS D
Sbjct: 247 LSRRKGMNLAPTWAPDGKSCILTLSKYGAPDLFRINQQGKILEQLTSRAGVNVSPTYSAD 306

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              IVF SDR G+ QLY+M+      KR++ D   +  +P WSP  + IA++      + 
Sbjct: 307 GRHIVFVSDRSGRPQLYLMELETKQTKRLTYDGRENA-EPNWSPVENKIAYSSLRDGLYQ 365

Query: 373 IGVMKK-DGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           I  +     +  + L  D +  ++P WSP G  ++F++        ++Y+I  NG  +  
Sbjct: 366 IFTLDPFSAAPPKQLTSDLTRHESPVWSPDGNQILFTQYDG--RRQQIYAIMKNGSYQRR 423

Query: 431 I-NTPAYASDPQW 442
           + + P   S  +W
Sbjct: 424 VFSFPGSQSSARW 436



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 68/177 (38%), Gaps = 4/177 (2%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R      +    D++  D+      ++T    + +S  ++ D + + + S   G ++LY
Sbjct: 175 SRIAFVSYEKRTKDVFMTDILGRRIRQVTRHNNLVVSPRFTRDGNFLSYSSYHSGSQKLY 234

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +     +   +    ++     P W+P G     T        +  + + G     L   
Sbjct: 235 ITDLRQAKITKSLSRRKGMNLAPTWAPDGKSCILTLSKYGAPDLFRINQQGKILEQLTSR 294

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
           + +  +PT+S  GR ++F   + G    +LY ++L  +  + L       ++P W  
Sbjct: 295 AGVNVSPTYSADGRHIVFVSDRSGR--PQLYLMELETKQTKRLTYDGRENAEPNWSP 349


>gi|194333584|ref|YP_002015444.1| WD40 domain-containing protein beta Propeller [Prosthecochloris
           aestuarii DSM 271]
 gi|194311402|gb|ACF45797.1| WD40 domain protein beta Propeller [Prosthecochloris aestuarii DSM
           271]
          Length = 441

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 103/451 (22%), Positives = 193/451 (42%), Gaps = 21/451 (4%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI-- 58
           M++ FFI  +  + I  C   +         +  ++K+A       P+ +    +     
Sbjct: 1   MNVTFFIRLQ-TLVILFCFFFMNAVTICAEPVGQYIKIAKEGETKIPLVLKTLDYQKEKD 59

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQD----SFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
            +    +  ++   L  + +F+L++      S   +    +    F   +S+GA++   G
Sbjct: 60  GKYARDLDGIMESGLDFTGMFSLLNAPLNVFSGGDRYVVGERQVNFPALSSVGAELYA-G 118

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            V++     + +   ++DV   K ++ K +       R I H    D+ + ITG+   F+
Sbjct: 119 GVMERRGSTINMAMEVYDVLTGKLMLKKLYSGKRDDLRSIGHRFCADLMELITGKPSVFD 178

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           SR+ FVS +      K  + + + DG   + +T S   +   P  SP+   +AY TY   
Sbjct: 179 SRLAFVSLNGG----KKEIFLSEFDGYGAKQVT-STGGMALTPSLSPDSGLLAYLTYS-G 232

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            +  + + D    +    +   + + + P + +       +   +   +IY VD   +  
Sbjct: 233 GLPDLQIKDLATQKTVSVM--KKGVKIDPSWRNGTLECATTFSFEGDQEIYMVDRNGSVG 290

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            RLT +  I++S S+SPD  ++ F S R G  Q+++   +   + R++   + +   P W
Sbjct: 291 RRLTRSRGIDVSPSFSPDGRKMAFVSSRHGSPQVFIKDLSSGRESRLTFSGKYN-TQPAW 349

Query: 355 SPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP  D IAFT      +  I  +  DGS  R L       +AP WSP G  ++FS  +DG
Sbjct: 350 SPVDDKIAFTSMQKNGEINIFTINADGSGLRQLTYRARQNEAPGWSPDGSMIVFSSTRDG 409

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
               KL+ ++ NGRN+  +  P     P W 
Sbjct: 410 SR--KLFMMNANGRNQRSLKLPGEQMQPSWS 438



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 8/178 (4%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R           +I+  +      +++T+T  + ++ S SPDS  + + +   G   L 
Sbjct: 179 SRLAFVSLNGGKKEIFLSEFDGYGAKQVTSTGGMALTPSLSPDSGLLAYLTYSGGLPDLQ 238

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVE 388
           +       QK +S  K+    DP W   G L   T FS      I ++ ++GS  R L  
Sbjct: 239 IKDLAT--QKTVSVMKKGVKIDPSW-RNGTLECATTFSFEGDQEIYMVDRNGSVGRRLTR 295

Query: 389 DSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQWVG 444
              +  +P++SP GR + F   + G    +++  DL+ GR   L  +  Y + P W  
Sbjct: 296 SRGIDVSPSFSPDGRKMAFVSSRHGS--PQVFIKDLSSGRESRLTFSGKYNTQPAWSP 351


>gi|94967623|ref|YP_589671.1| TolB-like protein [Candidatus Koribacter versatilis Ellin345]
 gi|94549673|gb|ABF39597.1| TolB-like protein [Candidatus Koribacter versatilis Ellin345]
          Length = 438

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 108/449 (24%), Positives = 189/449 (42%), Gaps = 31/449 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF---VSIDELGGKVSEVV 69
           M   L L  +L+    P +          +     V +A   F      + L     + +
Sbjct: 1   MLRKLFLPALLLIASLPLTAQTDWIKTGTNLGVEKVRLAVPDFKAGQGSESLSAAFDQTL 60

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL--GAQVLVTGRVIKEGKDRLRVE 127
             DL ++ +F+L+S+     +     S      W +    A +L  G +     + + V+
Sbjct: 61  WNDLYQAGLFDLVSKSFNPTQAPGQPSEVELNTWGAPPPNASMLAFGNIN-VANNEVTVQ 119

Query: 128 FRLWDVKDRK--QIIGKKFFSSP--ASWRKIAHTISDDIYQSITG-EKGDFNSRILFVSE 182
             L+DVK+ +  Q++GK++ +     + R IAH  +D+I   + G  +G   S+I F+S 
Sbjct: 120 GWLYDVKNPQTPQVLGKQYKNGATVENTRLIAHKFADEIIFRLGGGIQGIAESKIYFIST 179

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
                     +  MD DG+N + +T     I+  PR SP+  +VAY+   +   + +Y  
Sbjct: 180 RTG----HKEIWAMDYDGSNQKPITHLGS-IVLSPRASPDGARVAYSWMTNGWEIGIYST 234

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +        R+G       AP FS +G R   S  +    +IY+ D+     +RLTN   
Sbjct: 235 ELGRSVNFARLG---GTNSAPAFSGDGNRLAFSSSRSGDPEIYTSDISGANLKRLTNVKG 291

Query: 303 INISASYSPD-SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            + S +++P  ++QI F S R G  Q+Y M  +GS+  +++    A    P WSP G  +
Sbjct: 292 PDTSPTWNPKTNAQIAFVSGRTGLPQIYTMDVDGSNVIKMTDQGYA--ISPSWSPNGQFL 349

Query: 362 AFTKFS------GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDT 414
            F               I +M     Q   L  D      P+W+P GR ++F   + G  
Sbjct: 350 VFAWTRHYGPGAPGAQDIYIMDVASHQWVQLTHDGGRNDFPSWAPDGRHVVFQSSRSGR- 408

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWV 443
             +++S+  +G  +T +      S P W 
Sbjct: 409 -EEIWSMLADGSQQTQLTNSGANSMPNWS 436



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 71/177 (40%), Gaps = 6/177 (3%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +      +    +I+++D   +  + +T+   I +S   SPD +++ + S      ++ 
Sbjct: 172 SKIYFISTRTGHKEIWAMDYDGSNQKPITHLGSIVLSPRASPDGARVAY-SWMTNGWEIG 230

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE- 388
           +  +        ++    +   P +S  G+ +AF+        I      G+  + L   
Sbjct: 231 IYSTELGRSVNFARLGGTN-SAPAFSGDGNRLAFSSSRSGDPEIYTSDISGANLKRLTNV 289

Query: 389 DSNLQAPTWSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                +PTW+P +   + F   + G    ++Y++D++G N   +    YA  P W  
Sbjct: 290 KGPDTSPTWNPKTNAQIAFVSGRTG--LPQIYTMDVDGSNVIKMTDQGYAISPSWSP 344


>gi|119356690|ref|YP_911334.1| WD40 domain-containing protein [Chlorobium phaeobacteroides DSM
           266]
 gi|119354039|gb|ABL64910.1| WD40 domain protein beta Propeller [Chlorobium phaeobacteroides DSM
           266]
          Length = 442

 Score =  276 bits (706), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 101/455 (22%), Positives = 196/455 (43%), Gaps = 24/455 (5%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHA-----FVKVATNSANYSPVSI--AFT 53
           M +R   + ++       LL++     FP+ + A     ++ +  +     P+++   F 
Sbjct: 1   MIIREEFSRKMPAVFIKALLILWCFVSFPSFLFASETGEYIAIRKSGGGKIPLTLDKTFA 60

Query: 54  KFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVT 113
           K              V + L  S +F++I      +       +  F    S+G+++   
Sbjct: 61  KGNKESGWAETFDSAVREGLDYSGLFSMIPPPINVRADGGKGGV-NFSVLGSVGSEIYAG 119

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR+ KE    + ++  +++    K I+ K +  S    RK  +  S D+ + +TG+K  F
Sbjct: 120 GRLTKES-GSVTLDMEVYETLGGKLIMKKSYVGSEGDLRKQGNVFSADLIELLTGKKSLF 178

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            S+I+FVS           +   D +G NI  LT ++  I   P +SP+ + +A+  Y  
Sbjct: 179 GSKIVFVSNKTG----FKEIYQCDFNGQNIEQLTSTKS-ISLTPGYSPDGRYLAFTDYTT 233

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                  L    +      +     + + P +  NG+    ++  +   ++Y   +    
Sbjct: 234 GRPA---LHIRSLSDRKDTVLEKNGVSIDPGWR-NGRELATTLSYEGDQELYLCKVDGTV 289

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           + RLT +  I++S ++SPD S++ F S R G  Q+++M  +    +R++     +   P 
Sbjct: 290 SRRLTTSKGIDLSPTFSPDGSRMAFVSSRNGLPQIFIMDVSSGLTRRLTYSGRYN-TQPS 348

Query: 354 WSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
           WSP GD IA++ +    +  I  +  DG+  + L   S   +AP+WSP G  ++F+  + 
Sbjct: 349 WSPGGDKIAYSTWEKSGEINIFTINADGTGLKKLTSGSRENEAPSWSPDGSMIVFASNRQ 408

Query: 412 GDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGF 445
           G    KL+ +   G N+  L+        P W  F
Sbjct: 409 G--NKKLFVMGSGGENQKRLLQMDGEQMQPSWSLF 441


>gi|115378912|ref|ZP_01466048.1| protein TolB [Stigmatella aurantiaca DW4/3-1]
 gi|115364091|gb|EAU63190.1| protein TolB [Stigmatella aurantiaca DW4/3-1]
          Length = 366

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 106/378 (28%), Positives = 175/378 (46%), Gaps = 20/378 (5%)

Query: 73  LQRSDVFNLISQDSFKQKITN--PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
           L+ S +F ++ + SF              F  W+ +GA+ LV  ++  EG   LR E RL
Sbjct: 3   LRASGLFQVLDRASFTADAKEGITAGSINFTRWSDVGAESLVKVQLGAEG-GTLRGELRL 61

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           ++V   ++          +  R++AH ++D +Y+ +T E   F SRI+FV ++  +    
Sbjct: 62  FNVGSGREDFKASHAVPTSEPRQLAHFLADALYRHLTREPSPFLSRIVFVRKARDN---- 117

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             +   D DG N R LT     I   P   P+   VA+ +Y         L   +     
Sbjct: 118 RDVWTADWDGNNARALTTG--GINLLPALGPDG-TVAFTSYRRGQP---DLYLQKEGGEA 171

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASY 309
           + I     M     FS +GKR   +  + E+  IY  ++  +  +R+T+T   IN S S+
Sbjct: 172 RPIVQNGQMATGVAFSPDGKRIAYAQAQGESTQIYVANVDGSDAKRITDTPYGINSSPSW 231

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  ++ F S+R G  Q+YVM  +G++ +R++     +   P WSP+GDLIAFT     
Sbjct: 232 SPDGKRLAFVSNRGGSPQIYVMNVDGTNARRLTFQGNYNQT-PDWSPRGDLIAFTARDER 290

Query: 370 K-FAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             F +  +  D  +   L +D SN + P +SP+GR ++FS  + G    +L+ +   G N
Sbjct: 291 NAFDLFTVNVDTGKITRLTQDQSNNEEPVFSPNGRLILFSSTRTGT--PQLFVMTAEGNN 348

Query: 428 ETLINTP-AYASDPQWVG 444
              +         P W  
Sbjct: 349 PLALPMGKGGGLTPDWAP 366


>gi|145219969|ref|YP_001130678.1| WD40 domain-containing protein [Prosthecochloris vibrioformis DSM
           265]
 gi|145206133|gb|ABP37176.1| WD-40 repeat-containing protein [Chlorobium phaeovibrioides DSM
           265]
          Length = 442

 Score =  274 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 100/439 (22%), Positives = 179/439 (40%), Gaps = 23/439 (5%)

Query: 15  INLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIA--FTKFVSIDELG--GKVSEV 68
           I   + LV+     P  + A     +A        +++           E G   ++   
Sbjct: 13  IFSGVFLVMALLLLPGQVQANGDDYIAIRKEGSGKIALVLSIPAASGGKESGWAERLDVE 72

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSI-PRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
               L  + +F+LI             S    F   NS+GA+    G V+++    + + 
Sbjct: 73  SRSGLDFTGLFSLIPPPLNVAGPRGSSSQSINFGALNSVGAEFYAGGAVVQKS-GNVVLS 131

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             ++D    + I+ K +    +  R IAH    D+ + +TG    F S+++FVS      
Sbjct: 132 MEVYDTLGGRPILRKTYTGKESDLRSIAHAFCADLVELLTGRPSVFGSKVVFVSNR---- 187

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + + D DG  +R +T +R  +   P  SP+ Q +AY  Y         L    + 
Sbjct: 188 SGFKEIYMCDYDGHGMRQMTNTRS-LALTPVLSPDGQHLAYTDYASGRPR---LSILDLA 243

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              +R        + P + SN      ++      +IY V    +   R+TN+  I++S 
Sbjct: 244 GGKRRSVARSGNSIDPGWRSN-AEVATTLSFQGDQEIYLVRPDGSLARRVTNSRGIDLSP 302

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SPD +++ F S R    Q++++       KR++ +   +   P WSPQGD IA++   
Sbjct: 303 SFSPDGNKMAFVSSRTSAPQIFILDLQTGQTKRLTYNGSYN-TQPSWSPQGDKIAYSTME 361

Query: 368 -GEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              +  I  +  DGS  R L   S   ++P+WSP G  ++F+  + G    KL+ ++  G
Sbjct: 362 KNGEINIFTINTDGSSLRQLTSGSRQNESPSWSPGGDMIVFTSSRQGQK--KLFVMNAAG 419

Query: 426 RNE-TLINTPAYASDPQWV 443
             +  L+        P W 
Sbjct: 420 GGQRRLLQLEGEQMQPSWS 438



 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 80/178 (44%), Gaps = 7/178 (3%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G + +    +    +IY  D   +   ++TNT  + ++   SPD   + +     G+ +L
Sbjct: 178 GSKVVFVSNRSGFKEIYMCDYDGHGMRQMTNTRSLALTPVLSPDGQHLAYTDYASGRPRL 237

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            ++   G  ++ ++  +  +  DP W    ++     F G++  I +++ DGS  R +  
Sbjct: 238 SILDLAGGKRRSVA--RSGNSIDPGWRSNAEVATTLSFQGDQ-EIYLVRPDGSLARRVTN 294

Query: 389 DSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
              +  +P++SP G  + F   +   +  +++ +DL  G+ + L    +Y + P W  
Sbjct: 295 SRGIDLSPSFSPDGNKMAFVSSR--TSAPQIFILDLQTGQTKRLTYNGSYNTQPSWSP 350


>gi|85713384|ref|ZP_01044391.1| Periplasmic component of the Tol biopolymer transport system
           [Idiomarina baltica OS145]
 gi|85692790|gb|EAQ30781.1| Periplasmic component of the Tol biopolymer transport system
           [Idiomarina baltica OS145]
          Length = 298

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 81/299 (27%), Positives = 151/299 (50%), Gaps = 8/299 (2%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
             +R+ +H ISD +Y+++TGEKG F +RI +V+ +         L V D DGAN + L  
Sbjct: 7   NQFRQYSHRISDVVYEALTGEKGAFMTRIAYVTVN-QDDQYPYKLLVADYDGANEKVLLR 65

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           S +  L  P +SP+  K+AY +++++    +++ D    R  +++ +F  +  +P FS  
Sbjct: 66  SPEP-LMSPSWSPDGNKLAYVSFENKRP-EIFVQDIYTTR-REKVTSFPGINGSPVFSPK 122

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G +  + + KD   ++Y +DL++   +RLT    I+   S++PD   IVF S+R G+ QL
Sbjct: 123 GDKMAMVLSKDGNPELYVMDLKTKNLQRLTRNRTIDTEPSWTPDGRSIVFTSERGGRPQL 182

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y +  +  D +R++ + E +    V  P GD +     +   + I   +      ++L  
Sbjct: 183 YSVNLSSGDVRRLTFEGEQNLGGTVM-PSGDSMILVNRTNGNYHIARQEFPRGTMQVLTR 241

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
            +  ++P+ +P+G  +I+S   +      L  +  +GR +  L  +      P W  FM
Sbjct: 242 TALDESPSVAPNGSMVIYSTTHNNKQVLAL--VSTDGRFKARLPASSGEVKSPSWSPFM 298


>gi|93005961|ref|YP_580398.1| TolB-like [Psychrobacter cryohalolentis K5]
 gi|92393639|gb|ABE74914.1| TolB-like [Psychrobacter cryohalolentis K5]
          Length = 430

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 108/422 (25%), Positives = 184/422 (43%), Gaps = 22/422 (5%)

Query: 29  PTSIHAFVKVATN-SANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSF 87
           P+ + A V +  +         +AF  F     L    S ++  DL ++++  + SQ+  
Sbjct: 22  PSVLAAPVVLELDYEIPVQQNQVAFVPFAGDSVL----SPIIVNDLSKTEL-KVTSQNLP 76

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
           +Q  ++ +       W S+G   LV G   +  + ++  ++ + +VK  + I GK+  ++
Sbjct: 77  QQPRSSSELAGTLPVWQSMGIPYLVVGS-TRSSRGKVVTDYEVIEVKTGRVIEGKQTLTA 135

Query: 148 P---ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
                S R   H I+D +Y+ ITG  GDF+ RI ++ E        + L VMD DG N +
Sbjct: 136 DNNKDSMRYAGHVIADKVYELITGIPGDFSGRIAYIEEIGTGKAKVSRLKVMDADGENAK 195

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +T     I F P +SP+  ++AY+   D+    +Y+       A   +  F    L+P 
Sbjct: 196 TITEVSGSI-FSPAWSPDGNRIAYSVQRDKSYPVIYVQSVSGGGAT-PLTPFPGSNLSPS 253

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G + L S   + + DIY +        RLTN     +  SY+PD    VF SD+ G
Sbjct: 254 FSPDGSKILFSSSFEGSADIYEMSASGGQPRRLTNWPSSEVQPSYAPDGRSFVFVSDKTG 313

Query: 325 --KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             K Q+Y  +       ++S    A+   P +S  G  IAF           VM   G+ 
Sbjct: 314 FNKPQIYRYEFGSGRTTKVSNSGYAT--SPQFSSDGTQIAFLNGRSA----AVMNSGGAV 367

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
              L      +AP++SP+G+ ++++ K+ G     +    LNG      +       P W
Sbjct: 368 TANLGNTGIDEAPSFSPNGKRVVYASKQGGKGVLTI--KSLNGGEAFGKSGQGTIRSPVW 425

Query: 443 VG 444
             
Sbjct: 426 SA 427


>gi|218516474|ref|ZP_03513314.1| translocation protein TolB [Rhizobium etli 8C-3]
          Length = 229

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 114/231 (49%), Positives = 162/231 (70%), Gaps = 3/231 (1%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PRFSPN+Q+V Y ++ ++   RVY++     +  + +GNF  M  +PRFS +G++ ++S+
Sbjct: 2   PRFSPNRQEVTYMSFANQQP-RVYMLQLETGQ-REVVGNFPGMTFSPRFSPDGQKVIMSL 59

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           Q++   +IY++DL+S  T RLT+T  I+ S SYSPD +++ FESDR GK Q+YVM ++GS
Sbjct: 60  QQEGNSNIYTMDLRSRKTTRLTSTAAIDTSPSYSPDGARVSFESDRGGKPQIYVMNADGS 119

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            Q RIS   + SY  PVWSP+GDLIAFTK +G KF+IGVMK DGS ER+L    + + PT
Sbjct: 120 GQTRISF-GDGSYSTPVWSPRGDLIAFTKQAGGKFSIGVMKPDGSGERILTTGFHNEGPT 178

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           W+P+GR L+F R+  G  G +LYSIDL G NE L+ TP+Y SDP W   ++
Sbjct: 179 WAPNGRVLMFFRQAAGAGGPQLYSIDLTGYNEQLVKTPSYGSDPAWSPLLE 229



 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 6/199 (3%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +  +   + F PRFSP+ QKV   +   E    +Y MD R  R   R+ +  ++  +
Sbjct: 32  QREVVGNFPGMTFSPRFSPDGQKVI-MSLQQEGNSNIYTMDLR-SRKTTRLTSTAAIDTS 89

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +S +G R      +     IY ++   +   R++       +  +SP    I F    
Sbjct: 90  PSYSPDGARVSFESDRGGKPQIYVMNADGSGQTRISFGDGSYSTPVWSPRGDLIAFTKQA 149

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDG 380
            GK  + VM+ +GS ++ ++         P W+P G ++ F + +       +  +   G
Sbjct: 150 GGKFSIGVMKPDGSGERILTTGFHNE--GPTWAPNGRVLMFFRQAAGAGGPQLYSIDLTG 207

Query: 381 SQERLLVEDSNLQAPTWSP 399
             E+L+   S    P WSP
Sbjct: 208 YNEQLVKTPSYGSDPAWSP 226


>gi|145628741|ref|ZP_01784541.1| translocation protein TolB precursor [Haemophilus influenzae
           22.1-21]
 gi|144979211|gb|EDJ88897.1| translocation protein TolB precursor [Haemophilus influenzae
           22.1-21]
          Length = 317

 Score =  270 bits (691), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 145/320 (45%), Gaps = 14/320 (4%)

Query: 3   LRFFIAEELNM-KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
           +  F   ++ + K  + +L +++           V++  +        IA   FV     
Sbjct: 1   MLNFKGNKMKLLKRLVSVLAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVVPFVG--SA 58

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
              +S++V+ DL+ S  FN I+     Q+ T+   +   + W+++G   +V G+V+  G 
Sbjct: 59  PEDISKIVADDLRNSGKFNPIAVSQMPQRPTSAAEV-NPEAWSNIGIDAIVIGQVVPSGN 117

Query: 122 DRLRVEFRLWDVKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
               + ++L D           ++   +  +    R  AHT+SD++++ +T  +G F +R
Sbjct: 118 G-YSITYQLIDTVGASGTPGTVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTR 176

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I +V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++  
Sbjct: 177 IAYVVQKN-GGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKS 234

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             V  +      A K + +F+    AP FS +G R   +  +D  ++IY +        +
Sbjct: 235 QLV--VQDLNSGARKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQ 292

Query: 297 LTNTLFINISASYSPDSSQI 316
           LT+    N   ++SPD + I
Sbjct: 293 LTSGAGNNTEPAWSPDGNSI 312



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 63/179 (35%), Gaps = 13/179 (7%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY---S 286
           +Y   +    Y   T  D   +++   R             R    VQK+     Y    
Sbjct: 143 SYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFR--------TRIAYVVQKNGGSQPYEVRV 194

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D        +  +    +S ++SPD  ++ + S    K QL V   N   +K ++  + 
Sbjct: 195 ADYDGYNQFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLVVQDLNSGARKVVASFQG 254

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSL 404
            +   P +SP G  +AF         I VM  +G     L     N   P WSP G S+
Sbjct: 255 HN-GAPAFSPDGSRLAFASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEPAWSPDGNSI 312



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 56/136 (41%), Gaps = 8/136 (5%)

Query: 314 SQIVFESDREGKEQLY---VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           ++I +   + G  Q Y   V   +G +Q  I          P WSP G  +A+  F  +K
Sbjct: 175 TRIAYVVQKNGGSQPYEVRVADYDGYNQF-IVNRSAQPIMSPAWSPDGQRLAYVSFENKK 233

Query: 371 FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             + V   +    +++     +  AP +SP G  L F+  +DG     +Y +  NG   T
Sbjct: 234 SQLVVQDLNSGARKVVASFQGHNGAPAFSPDGSRLAFASSRDG--VLNIYVMGANGGTPT 291

Query: 430 -LINTPAYASDPQWVG 444
            L +     ++P W  
Sbjct: 292 QLTSGAGNNTEPAWSP 307


>gi|71065810|ref|YP_264537.1| TolB periplasmic receptor [Psychrobacter arcticus 273-4]
 gi|71038795|gb|AAZ19103.1| probable TolB periplasmic receptor [Psychrobacter arcticus 273-4]
          Length = 430

 Score =  268 bits (686), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 106/425 (24%), Positives = 182/425 (42%), Gaps = 24/425 (5%)

Query: 27  FFPTSIHAFVKVATN-SANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
             P+ + A V +  +         +AF  F     L    S ++  DL ++++   I+  
Sbjct: 20  IAPSVLAAPVILELDYEIPVQQNQVAFVPFAGDSVL----SPIIVNDLSKTEL--KITSQ 73

Query: 86  SFKQKITNPDSIP-RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
           +  Q+  +   +      W S+G   LV G   +  + ++  ++ + +VK  + I GK+ 
Sbjct: 74  NLPQQPRSSSELSGTLPVWQSMGIPYLVVGS-TRSSRGKVVTDYEVIEVKTGRVIEGKQT 132

Query: 145 FSSP---ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
            ++     S R   H I+D +Y+ ITG  GDF+ RI ++ E        + L +MD DG 
Sbjct: 133 LTTDNNKDSMRYAGHVIADKVYELITGIPGDFSGRIAYIEEIGAGKAKVSRLKIMDADGE 192

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N + +T     I F P +SP+  ++AYA   D+    +Y+       A   +  F    L
Sbjct: 193 NAKTITEVSGSI-FSPAWSPDGNRIAYAVQRDKSYPVIYVQSVSGGGAT-PLTPFPGSNL 250

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +P FS +G + L S   + + DIY +        RLTN     +  SY+PD    VF SD
Sbjct: 251 SPSFSPDGSKILFSSSFEGSADIYEMSASGGQPRRLTNWPSSEVQPSYAPDGRSFVFVSD 310

Query: 322 REG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           + G  K Q+Y  +       ++S    A+   P +S  G  IAF           +M   
Sbjct: 311 KAGFNKPQIYRYEFGSGRTTKVSNSGYAT--SPQFSSDGSQIAFLNGRSA----AIMNSG 364

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           G+    L      +AP++SP+G+ ++++ K+ G     +    LNG      +       
Sbjct: 365 GAVTANLGNTGIDEAPSFSPNGKRVVYASKQGGKGVLTI--KSLNGGEAFGKSGQGVIRS 422

Query: 440 PQWVG 444
           P W  
Sbjct: 423 PVWSA 427


>gi|328675514|gb|AEB28189.1| tolB protein precursor [Francisella cf. novicida 3523]
          Length = 435

 Score =  266 bits (679), Expect = 7e-69,   Method: Composition-based stats.
 Identities = 104/444 (23%), Positives = 182/444 (40%), Gaps = 24/444 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M+  +  +L+ +            +V        P+    +  V +D+   +V+ V+  D
Sbjct: 1   MRKIIAGVLIFVFLISSLYADLVAEVT-TGVIQKPLVTVVSDNV-VDQFPQQVNSVIVAD 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L  +        D+ K +I    +IP    W SL +  +V  +  K   +   VE ++  
Sbjct: 59  LNHNAKLQ--GNDTIKYEIKQKQNIP----WKSLKSDYVVLTKYTKNSYNNYTVEVQILK 112

Query: 133 VKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--I 189
             D   +    + +   S  R +AH IS+ +Y  +TGE+G F S++ +V  S        
Sbjct: 113 RNDTSYLQAITYKNINISLMRTLAHKISNYVYHKLTGEQGFFLSKLAYVKVSNPYARYGR 172

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L + D DG N   +    D  +  P +S + + + Y++Y     + VY ++    + 
Sbjct: 173 LYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLEIATGK- 230

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISA 307
             RI N++ +  +P FS +GK   +++ K   +  +IY ++L + A +R+T    IN + 
Sbjct: 231 VTRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLATKALKRITIN-GINTAP 289

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +SP+   IVF SDREG+  +YV   N    Q  I   K    ++P ++P G  I F   
Sbjct: 290 KFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIYQAYEPNYTPDGKNIVFMNQ 349

Query: 367 SGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           S       I            +    +  +PT SP G  + +         S L  + L+
Sbjct: 350 SSRTSGTQIADFNLANGSVTNITNGKSDSSPTVSPYGDMIAYISTNT-RGYSSLDMVSLD 408

Query: 425 GRNETLINTPAYA----SDPQWVG 444
           G N   I T          P W  
Sbjct: 409 GDNHFNIETANNGNILIQSPSWSP 432


>gi|239906030|ref|YP_002952769.1| putative TolB protein precursor [Desulfovibrio magneticus RS-1]
 gi|239795894|dbj|BAH74883.1| putative TolB protein precursor [Desulfovibrio magneticus RS-1]
          Length = 441

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 94/449 (20%), Positives = 180/449 (40%), Gaps = 22/449 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAF--VKVATNSANYSPVSIAFT-KFVSIDEL-- 61
           + + + +    C L+        T   A   + V       + +++     F    ++  
Sbjct: 3   MRKRMMVTGMWCALVAAFLCLGATRAQAQSSLAVDIQGPGQAKMNLVQARPFAGGGQMTP 62

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP-DSIPRFQDWNSLGAQVLVTGRVIKEG 120
             K+ ++++KDLQ      ++ Q S   ++         F+ +      VLVT      G
Sbjct: 63  AEKLQDLINKDLQFLPFLQIVPQSSVPGQVAGATADQIDFKPFGLAKIDVLVTANWTP-G 121

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
            +   VE R ++V  +K ++GK +   + A    IA     ++ Q++TG+ G FNS+I F
Sbjct: 122 GNLGNVELRAFEVYSQKVLVGKGYDAVTDAQLPDIADRFCMELMQALTGQGGFFNSQIAF 181

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILR 238
           V  S   G     +  +   G  +  +T   +  +   P +S + +++ +          
Sbjct: 182 VKPSAGKGA---DIWTVRPTGRGLNRVTNYNELGMAVSPSWSFDGRRIVFTLIGSRG--- 235

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            YL        P+      + +++P F  +G +  +S+      DIY ++      + L 
Sbjct: 236 HYLGVWSGGGKPQVYTLPSTNVVSPHFLPDG-QVAVSLTMHGKADIYLLNSAYQPGQPLV 294

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +   I +S +++     + + SD  G   +YV   +G   +R++     +  +P  SP G
Sbjct: 295 SGSGIEVSPTFAASGGAMAYVSDGTGSPNIYVTTVHGGAGRRVTTSGYNT--NPSMSPDG 352

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSK 417
            LIAFTK  G    + VM     QE  +       + P++SP G  + FS  + G    K
Sbjct: 353 KLIAFTKQLGGAQKVFVMDLATGQETQVTSGGGSDENPSFSPDGYFIAFSSTRSGQK--K 410

Query: 418 LYSIDLNGRNETLINTP-AYASDPQWVGF 445
           ++    +G    +I T    A  P W   
Sbjct: 411 IFVTTRHGAPPVMIPTGDGAAYMPSWGPL 439


>gi|289804344|ref|ZP_06534973.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 285

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 76/292 (26%), Positives = 139/292 (47%), Gaps = 8/292 (2%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++     Q L 
Sbjct: 1   HTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLM 58

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +SP+  K+AY T++        ++ T  + A +++ +F     AP FS +G +   +
Sbjct: 59  SPAWSPDGSKLAYVTFESGR--SALVIQTLANGAVRQVASFPRHNGAPAFSPDGTKLAFA 116

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y M  NG
Sbjct: 117 LSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQVYKMNING 176

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              +RI+ +   +  D   S  G  +     +  +  I          ++L      + P
Sbjct: 177 GAAQRITWEGSQNQ-DADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSSTFLDETP 235

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           + +P+G  +I+S  +    GS L  +  +GR +  L  T      P W  ++
Sbjct: 236 SLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVKSPAWSPYL 285


>gi|328676439|gb|AEB27309.1| tolB protein precursor, periplasmic protein involved in the
           tonb-independent uptake of group A colicins [Francisella
           cf. novicida Fx1]
          Length = 435

 Score =  263 bits (673), Expect = 4e-68,   Method: Composition-based stats.
 Identities = 103/435 (23%), Positives = 182/435 (41%), Gaps = 22/435 (5%)

Query: 22  VLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNL 81
           VLI  F  ++++A +     +       +       +D+   +V+ V+  DL  +     
Sbjct: 8   VLIFVFLISNLYADLVAEVTTGVIQKPLVTIVSDNVVDQFPQQVNSVIVADLNHNAKLQ- 66

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
            + D+ K +I    ++P    W SL +  +V  +  K   +   VE ++    D   +  
Sbjct: 67  -ANDTIKYEIKQKQNVP----WKSLKSDYVVLTKYTKNSYNNYTVEVQILKRNDTSYLQA 121

Query: 142 KKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--IKNSLCVMDR 198
             + +   S  R +AH IS+ +YQ +TG +G F +++ +V  S           L + D 
Sbjct: 122 ITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTKLAYVKVSNPYARYGRLYELIISDY 181

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG N   +    D  +  P +S + + + Y++Y     + VY ++    +   RI N++ 
Sbjct: 182 DGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLEIATGK-VTRITNYKG 239

Query: 259 MILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +  +P FS +GK   +++ K   +  +IY ++L + A +R+T    IN +  +SP+   I
Sbjct: 240 INSSPSFSPDGKEIALALSKGYSDQTNIYIMNLATKALKRITIN-GINTAPKFSPNGQSI 298

Query: 317 VFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AI 373
           VF SDREG+  +YV   N    Q  I   K    ++P ++P G  I F   S       I
Sbjct: 299 VFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYEPNYTPDGKNIVFMNQSSRTSGTQI 358

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN----ET 429
                       +       +PT SP G  + +         S L  + L+G N    ET
Sbjct: 359 ADFNLANGSVTNITNGKADSSPTVSPYGDMVAYISTNT-RGYSSLDMVSLDGDNHFNIET 417

Query: 430 LINTPAYASDPQWVG 444
             N       P W  
Sbjct: 418 ADNGNILIQSPSWSP 432


>gi|208780417|ref|ZP_03247758.1| TolB amino- domain family protein [Francisella novicida FTG]
 gi|208743785|gb|EDZ90088.1| TolB amino- domain family protein [Francisella novicida FTG]
          Length = 439

 Score =  263 bits (672), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 105/450 (23%), Positives = 183/450 (40%), Gaps = 26/450 (5%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +   +   I    + V +       + A V          P+    +  V +D+   +V+
Sbjct: 1   MRNGMRKIIAGVSIFVFLISNLYADLVAEVT---TGVIQKPLVTVVSDNV-VDQFPQQVN 56

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            V+  DL  +      + D+ K +I    +IP    W SL +  +V  +  K   +   V
Sbjct: 57  SVIVADLNHNAKLQ--ANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYTKNAYNNYTV 110

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           E ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F +++ +V  S  
Sbjct: 111 EVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTKLAYVKVSNP 170

Query: 186 SGI--IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                    L + D DG N   +    D  +  P +S + + + Y++Y     + VY ++
Sbjct: 171 YARYGRLYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLE 229

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
               +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L + A +R+T   
Sbjct: 230 IATGK-VTRITNYKGINSSPSFSPDGKEIALALSKGYSDKTNIYIMNLATKALKRITIN- 287

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDL 360
            IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    ++P ++P G  
Sbjct: 288 GINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYEPNYTPDGKN 347

Query: 361 IAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           I F   S       I            +       +PT SP G  + +         S L
Sbjct: 348 IVFMNQSSRTSGTQIADFNLANGSVTNITNGKADSSPTVSPYGDMVAYISTNT-RGYSSL 406

Query: 419 YSIDLNGRN----ETLINTPAYASDPQWVG 444
             + L+G N    ET  N       P W  
Sbjct: 407 DMVSLDGDNHFNIETADNGNILIQSPSWSP 436


>gi|254373809|ref|ZP_04989292.1| TolB protein precursor [Francisella novicida GA99-3548]
 gi|151571530|gb|EDN37184.1| TolB protein precursor [Francisella novicida GA99-3548]
          Length = 439

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 105/450 (23%), Positives = 183/450 (40%), Gaps = 26/450 (5%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +   +   I    + V +       + A V          P+    +  V +D+   +V+
Sbjct: 1   MRNGMRKIIAGVSIFVFLISNLYADLVAEVT---TGVIQKPLVTVVSDNV-VDQFPQQVN 56

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            V+  DL  +      + D+ K +I    +IP    W SL +  +V  +  K   +   V
Sbjct: 57  SVIVADLNHNAKLQ--ANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYTKNAYNNYTV 110

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           E ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F +++ +V  S  
Sbjct: 111 EVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTKLAYVKVSNP 170

Query: 186 SGI--IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                    L + D DG N   +    D  +  P +S + + + Y++Y     + VY ++
Sbjct: 171 YARYGRLYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLE 229

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
               +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L + A +R+T   
Sbjct: 230 IATGK-VTRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLATKALKRITIN- 287

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDL 360
            IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    ++P ++P G  
Sbjct: 288 GINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYEPNYTPDGKN 347

Query: 361 IAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           I F   S       I            +       +PT SP G  + +         S L
Sbjct: 348 IVFMNQSSRTSGTQIADFNLANGSVTNITNGKADSSPTVSPYGDMVAYISTNT-RGYSSL 406

Query: 419 YSIDLNGRN----ETLINTPAYASDPQWVG 444
             + L+G N    ET  N       P W  
Sbjct: 407 DMVSLDGDNHFNIETADNGNILIQSPSWSP 436


>gi|57340054|gb|AAW50014.1| hypothetical protein FTT0840 [synthetic construct]
          Length = 474

 Score =  263 bits (671), Expect = 5e-68,   Method: Composition-based stats.
 Identities = 102/453 (22%), Positives = 183/453 (40%), Gaps = 24/453 (5%)

Query: 4   RFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGG 63
           +  +     M+  +  + + +            +V        P+    +  V +D+   
Sbjct: 22  KHMLEMRNGMRKIIAGVFIFVFLISNLYADLVAEVT-TGVIQKPLVTVVSDNV-VDQFPQ 79

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           +V+ V+  DL  +      + D+ K +I    +IP    W SL +  +V  +      + 
Sbjct: 80  QVNSVIVADLNHNAKLQ--ANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYTNNSYNN 133

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
             VE ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F +++ +V  
Sbjct: 134 YTVEVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTKLAYVKV 193

Query: 183 SVVSGI--IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S           L + D DG N   +    D  +  P +S + + + Y++Y     + VY
Sbjct: 194 SNPYARYGRLYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYS-GGSMGVY 252

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLT 298
            ++    +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L + A +R+T
Sbjct: 253 TLEIATGK-VTRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLSTKALKRIT 311

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQ 357
               IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    ++P ++P 
Sbjct: 312 IN-GINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYEPNYTPD 370

Query: 358 GDLIAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           G  I F   S       I            +       +PT SP G  + +         
Sbjct: 371 GKNIVFMNQSSRTSGTQIADFNLANGSVTNITNGKADSSPTVSPYGDMVAYISTNT-RGY 429

Query: 416 SKLYSIDLNGRN----ETLINTPAYASDPQWVG 444
           S L  + L+G N    ET  N       P W  
Sbjct: 430 SSLDMVSLDGDNHFNIETADNGNILIQSPSWSP 462


>gi|254372335|ref|ZP_04987826.1| TolB protein precursor [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570064|gb|EDN35718.1| TolB protein precursor [Francisella novicida GA99-3549]
          Length = 439

 Score =  262 bits (670), Expect = 7e-68,   Method: Composition-based stats.
 Identities = 105/450 (23%), Positives = 183/450 (40%), Gaps = 26/450 (5%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +   +   I    + V +       + A V          P+    +  V +D+   +V+
Sbjct: 1   MRNGMRKIIAGVSIFVFLISNLYADLVAEVT---TGVIQKPLVTVVSDNV-VDQFPQQVN 56

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            V+  DL  +      + D+ K +I    +IP    W SL +  +V  +  K   +   V
Sbjct: 57  SVIVADLNHNAKLQ--ANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYTKNSYNNYTV 110

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           E ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F +++ +V  S  
Sbjct: 111 EVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTKLAYVKVSNP 170

Query: 186 SGI--IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                    L + D DG N   +    D  +  P +S + + + Y++Y     + VY ++
Sbjct: 171 YARYGRLYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLE 229

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
               +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L + A +R+T   
Sbjct: 230 IATGK-VTRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLATKALKRITIN- 287

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDL 360
            IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    ++P ++P G  
Sbjct: 288 GINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYEPNYTPDGKN 347

Query: 361 IAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           I F   S       I            +       +PT SP G  + +         S L
Sbjct: 348 IVFMNQSSRTSGTQIADFNLANGSVTNITNGKADSSPTVSPYGDMVAYISTNT-RGYSSL 406

Query: 419 YSIDLNGRN----ETLINTPAYASDPQWVG 444
             + L+G N    ET  N       P W  
Sbjct: 407 DMVSLDGDNHFNIETADNGNILIQSPSWSP 436


>gi|56707949|ref|YP_169845.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670420|ref|YP_666977.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254370438|ref|ZP_04986443.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874753|ref|ZP_05247463.1| tolB protein [Francisella tularensis subsp. tularensis MA00-2987]
 gi|67461899|sp|Q5NGJ7|TOLB_FRATT RecName: Full=Protein tolB; Flags: Precursor
 gi|118574581|sp|Q14HZ9|TOLB_FRAT1 RecName: Full=Protein tolB; Flags: Precursor
 gi|56604441|emb|CAG45473.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320753|emb|CAL08856.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568681|gb|EDN34335.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254840752|gb|EET19188.1| tolB protein [Francisella tularensis subsp. tularensis MA00-2987]
          Length = 439

 Score =  262 bits (670), Expect = 8e-68,   Method: Composition-based stats.
 Identities = 104/450 (23%), Positives = 182/450 (40%), Gaps = 26/450 (5%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +   +   I    + V +       + A V          P+    +  V +D+   +V+
Sbjct: 1   MRNGMRKIIAGVFIFVFLISNLYADLVAEVT---TGVIQKPLVTVVSDNV-VDQFPQQVN 56

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            V+  DL  +      + D+ K +I    +IP    W SL +  +V  +      +   V
Sbjct: 57  SVIVADLNHNAKLQ--ANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYTNNSYNNYTV 110

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           E ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F +++ +V  S  
Sbjct: 111 EVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTKLAYVKVSNP 170

Query: 186 SGI--IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                    L + D DG N   +    D  +  P +S + + + Y++Y     + VY ++
Sbjct: 171 YARYGRLYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLE 229

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
               +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L + A +R+T   
Sbjct: 230 IATGK-VTRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLSTKALKRITIN- 287

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDL 360
            IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    ++P ++P G  
Sbjct: 288 GINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYEPNYTPDGKN 347

Query: 361 IAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           I F   S       I            +       +PT SP G  + +         S L
Sbjct: 348 IVFMNQSSRTSGTQIADFNLANGSVTNITNGKADSSPTVSPYGDMVAYISTNT-RGYSSL 406

Query: 419 YSIDLNGRN----ETLINTPAYASDPQWVG 444
             + L+G N    ET  N       P W  
Sbjct: 407 DMVSLDGDNHFNIETADNGNILIQSPSWSP 436


>gi|118496965|ref|YP_898015.1| group A colicin translocation; tolB protein [Francisella tularensis
           subsp. novicida U112]
 gi|194324194|ref|ZP_03057968.1| TolB amino- domain family protein [Francisella tularensis subsp.
           novicida FTE]
 gi|166988077|sp|A0Q4U6|TOLB_FRATN RecName: Full=Protein tolB; Flags: Precursor
 gi|118422871|gb|ABK89261.1| group A colicin translocation; tolB protein [Francisella novicida
           U112]
 gi|194321641|gb|EDX19125.1| TolB amino- domain family protein [Francisella tularensis subsp.
           novicida FTE]
          Length = 435

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 103/444 (23%), Positives = 182/444 (40%), Gaps = 24/444 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M+  +  + + +            +V        P+    +  V +D+   +V+ V+  D
Sbjct: 1   MRKIIAGVSIFVFLISNLYADLVAEVT-TGVIQKPLVTVVSDNV-VDQFPQQVNSVIVAD 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L  +      + D+ K +I    +IP    W SL +  +V  +  K   +   VE ++  
Sbjct: 59  LNHNAKLQ--ANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYTKNAYNNYTVEVQILK 112

Query: 133 VKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--I 189
             D   +    + +   S  R +AH IS+ +YQ +TG +G F +++ +V  S        
Sbjct: 113 RNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTKLAYVKVSNPYARYGR 172

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L + D DG N   +    D  +  P +S + + + Y++Y     + VY ++    + 
Sbjct: 173 LYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLEIATGK- 230

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISA 307
             RI N++ +  +P FS +GK   +++ K   +  +IY ++L + A +R+T    IN + 
Sbjct: 231 VTRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLATKALKRITIN-GINTAP 289

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +SP+   IVF SDREG+  +YV   N    Q  I   K    ++P ++P G  I F   
Sbjct: 290 KFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYEPNYTPDGKNIVFMNQ 349

Query: 367 SGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           S       I            +       +PT SP G  + +         S L  + L+
Sbjct: 350 SSRTSGTQIADFNLANGSVTNITNGKADSSPTVSPYGDMVAYISTNT-RGYSSLDMVSLD 408

Query: 425 GRN----ETLINTPAYASDPQWVG 444
           G N    ET  N       P W  
Sbjct: 409 GDNHFNIETADNGNILIQSPSWSP 432


>gi|322435206|ref|YP_004217418.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321162933|gb|ADW68638.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 449

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 104/434 (23%), Positives = 196/434 (45%), Gaps = 32/434 (7%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFVSI------DELGGKVSEVVSKDLQRSDVFNLISQD 85
               +K+  + +    + +A   F S       D L      V+  DL  + +F+++S+ 
Sbjct: 24  AQGDIKLELSGSGADRIRLATANFKSGTLDPKNDALRHTFDTVLYDDLHNAGIFDMVSKS 83

Query: 86  SFKQKITNPDSIPRFQDWNS--LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK--QIIG 141
              Q      +      W+   + A ++  G +   G  RL V   L+DVK+ +  Q++ 
Sbjct: 84  MAPQATPGSPTEINLPQWSGAPVNASMVAFGALGVTGT-RLAVNGFLFDVKNTQFPQVLA 142

Query: 142 KKF--FSSPASWRKIAHTISDDIYQSITG-EKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           K++   +S  + R+IAH  +D+I   ++G   G   ++I FV     +      +  MD 
Sbjct: 143 KQYGEEASEDAARQIAHRFADEIILRLSGGTNGIAETKIYFVHLDGGN----KEIWEMDY 198

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG+N   +T S   +   PR SP+  ++A+++   +D  ++ +    ++R          
Sbjct: 199 DGSNQHPVT-SLGSVSVSPRVSPDNTRLAFSSLG-KDGFQIKMFSLLLNRMVSFPAGGGG 256

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP-DSSQIV 317
             ++P +SS+GK+   S  +    +IY  D    ++ R+T+    ++S  ++P   +QI 
Sbjct: 257 TNVSPAWSSDGKQLAFSSSRTGDNEIYIADANGGSSRRITSFAGPDVSPVFNPRSGAQIA 316

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKF 371
           + S R G  QLY M+++GS   R++    A+   P WSP G  +AF              
Sbjct: 317 WISGRSGLPQLYTMETDGSGVTRLTDGGYAT--SPSWSPNGQFLAFAWNRKYGPGAPGGQ 374

Query: 372 AIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGD-TGSKLYSIDLNGRNET 429
            I VM+    +   L  D      P+WSP GR ++F+   +G  + SK++++  +G +  
Sbjct: 375 DIYVMEIASKRWIQLTHDMGPCDFPSWSPDGRHIVFANSPNGRASSSKIFTMLADGTDRH 434

Query: 430 LINTPAYASDPQWV 443
            + T A +  P W 
Sbjct: 435 AL-TGAGSDMPNWS 447



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 69/177 (38%), Gaps = 4/177 (2%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +           +I+ +D   +    +T+   +++S   SPD++++ F S  +   Q+ 
Sbjct: 179 TKIYFVHLDGGNKEIWEMDYDGSNQHPVTSLGSVSVSPRVSPDNTRLAFSSLGKDGFQIK 238

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE- 388
           +     +           +   P WS  G  +AF+        I +   +G   R +   
Sbjct: 239 MFSLLLNRMVSFPAGGGGTNVSPAWSSDGKQLAFSSSRTGDNEIYIADANGGSSRRITSF 298

Query: 389 DSNLQAPTWSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                +P ++P SG  + +   + G    +LY+++ +G   T +    YA+ P W  
Sbjct: 299 AGPDVSPVFNPRSGAQIAWISGRSG--LPQLYTMETDGSGVTRLTDGGYATSPSWSP 353


>gi|229160030|ref|ZP_04288034.1| WD40-like Beta Propeller [Bacillus cereus R309803]
 gi|228623467|gb|EEK80289.1| WD40-like Beta Propeller [Bacillus cereus R309803]
          Length = 298

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 92/285 (32%), Positives = 151/285 (52%), Gaps = 12/285 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           ++I   +    S+I F S    +      + VM+ DG+N   +T + D   FEP +SP+ 
Sbjct: 22  KTICSIRKVVISKIAFSSNRDGN----FEIYVMNPDGSNQTNITNNPDN-DFEPTWSPDG 76

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           QK+A+++  D +I  +Y+M+         I N  +  L P +S +G++   S  +D   +
Sbjct: 77  QKIAFSSIRDGNI-EIYVMNAD-GSNQTNITNNPNDDLEPAWSPDGQKIAFSSFRDGNSE 134

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           IY +++      RLTN    +   ++SPD  +I F S+R G  ++YVM +NGS+Q  I+ 
Sbjct: 135 IYVMNVDGTNQTRLTNNPASDSKPTWSPDGQKIAFSSNRNGPLEIYVMNANGSNQTNITN 194

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGR 402
           + +   F+P WSP G  IAFT    E   I V+  DGS +  L       + PTWSP G+
Sbjct: 195 NPDG-DFEPAWSPDGQKIAFTSVRNENLEIYVINVDGSNQTRLTNSQGDNSLPTWSPDGQ 253

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVGFM 446
            + FS  ++G+   ++Y ++ +G N+T + N PA  S+P W  FM
Sbjct: 254 KIAFSSTRNGNR--EIYVMNADGSNQTNITNNPAADSEPAWSPFM 296


>gi|167626687|ref|YP_001677187.1| group A colicin translocation protein TolB [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
 gi|167596688|gb|ABZ86686.1| group A colicin translocation; TolB protein [Francisella
           philomiragia subsp. philomiragia ATCC 25017]
          Length = 435

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 102/427 (23%), Positives = 183/427 (42%), Gaps = 23/427 (5%)

Query: 30  TSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           TS+ A +     +       +       +D+   +V+ ++  DL  +        DS K 
Sbjct: 17  TSLQAELVATVTTGVIQKPLVTVISNNVVDQFPQQVNSIIVSDLNHNGKLQ--GDDSIKY 74

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS-SP 148
           +I    +IP    W SL +  +V  +  K+  +   VE +++   D   I    + + S 
Sbjct: 75  EINQSQNIP----WKSLKSDYVVLTKYTKDSNNSYTVEVQIYKRNDTSYIRSITYKNIST 130

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--IKNSLCVMDRDGANIRYL 206
           A  R +AH +++ +YQ +TGE+G F +++ +V  S           L + D DG N   +
Sbjct: 131 ALVRPLAHKVANYVYQKLTGEQGFFLTKLAYVQVSNPYARYGRIYELVISDYDGYNKHTV 190

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               D  +  P +S + + + Y++Y     + VY +D    +   RI NF+ +  +P FS
Sbjct: 191 LRQSDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLDIATGK-VTRISNFKGINSSPSFS 248

Query: 267 SNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            NGK   +++ K   +  +IY ++L + A +R+T    IN +  +SP+   IVF SDR+G
Sbjct: 249 PNGKEIALALSKGYSDQTNIYILNLATKALKRITIN-GINTAPKFSPNGQSIVFTSDRDG 307

Query: 325 KEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGS 381
           +  +YV   N    +  ++S      Y +P ++P G  I F   S      I        
Sbjct: 308 RPNIYVAPVNSRYPQSSKLSSRIYQGY-EPNYTPDGKDIVFMNQSRSSGTQIADFNLANG 366

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA---- 437
               +    +  +PT SP G  + +    +    S L  + L+G N   ++T        
Sbjct: 367 SVTNITNGKSDSSPTVSPFGNMIAYIST-NSRGYSSLDMVSLDGDNHFNVDTANNGNILI 425

Query: 438 SDPQWVG 444
             P W  
Sbjct: 426 QSPSWSP 432


>gi|224457030|ref|ZP_03665503.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159134|gb|ADA78525.1| TolB protein precursor [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 435

 Score =  261 bits (667), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 102/444 (22%), Positives = 181/444 (40%), Gaps = 24/444 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M+  +  + + +            +V        P+    +  V +D+   +V+ V+  D
Sbjct: 1   MRKIIAGVFIFVFLISNLYADLVAEVT-TGVIQKPLVTVVSDNV-VDQFPQQVNSVIVAD 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L  +      + D+ K +I    +IP    W SL +  +V  +      +   VE ++  
Sbjct: 59  LNHNAKLQ--ANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYTNNSYNNYTVEVQILK 112

Query: 133 VKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--I 189
             D   +    + +   S  R +AH IS+ +YQ +TG +G F +++ +V  S        
Sbjct: 113 RNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTKLAYVKVSNPYARYGR 172

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L + D DG N   +    D  +  P +S + + + Y++Y     + VY ++    + 
Sbjct: 173 LYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLEIATGK- 230

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISA 307
             RI N++ +  +P FS +GK   +++ K   +  +IY ++L + A +R+T    IN + 
Sbjct: 231 VTRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLSTKALKRITIN-GINTAP 289

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +SP+   IVF SDREG+  +YV   N    Q  I   K    ++P ++P G  I F   
Sbjct: 290 KFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYEPNYTPDGKNIVFMNQ 349

Query: 367 SGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           S       I            +       +PT SP G  + +         S L  + L+
Sbjct: 350 SSRTSGTQIADFNLANGSVTNITNGKADSSPTVSPYGDMVAYISTNT-RGYSSLDMVSLD 408

Query: 425 GRN----ETLINTPAYASDPQWVG 444
           G N    ET  N       P W  
Sbjct: 409 GDNHFNIETADNGNILIQSPSWSP 432


>gi|283850886|ref|ZP_06368172.1| WD40 domain protein beta Propeller [Desulfovibrio sp. FW1012B]
 gi|283573809|gb|EFC21783.1| WD40 domain protein beta Propeller [Desulfovibrio sp. FW1012B]
          Length = 442

 Score =  261 bits (666), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 91/453 (20%), Positives = 178/453 (39%), Gaps = 21/453 (4%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFT-KFVSID 59
           M++R        +   + LL+  +      +    + V       + +++     F    
Sbjct: 1   MTMRA-TKRFTGVLGAVVLLVACLLSGQAGAQQTSLAVDIQGPGQAKMNLVMARPFAGGG 59

Query: 60  EL--GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP-DSIPRFQDWNSLGAQVLVTGRV 116
           ++    K+ ++++KDLQ      L+   +   ++         F+ ++     VLVT   
Sbjct: 60  QMSPADKLQDLINKDLQFLPFLQLVPPSNIPGQLGGAKAEQIDFKPFSLAKVDVLVTANW 119

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNS 175
              G +   VE R ++V  +K ++GK +   + A    IA     ++  ++TG+ G FNS
Sbjct: 120 TP-GTNLGNVELRAFEVYSQKVLVGKGYDGVTDAQLPDIADRFCMELMAALTGQGGFFNS 178

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDE 234
           +I FV  S   G     +  +   G  +  +T   D  +   P +S + +++ +      
Sbjct: 179 QIAFVKPSSGKGT---DIWTVRPMGRGLTRVTSYNDLGMAVSPAWSFDGRRIVFTLIGSR 235

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                YL        P+      + +++PRF  +G +  +S+      DIY +       
Sbjct: 236 ---SHYLGVWSGGGKPQVYTLPTTNVVSPRFLPDG-QIAVSLSLRGKADIYLLTGGQQPG 291

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             + +   I++S S+      + + SD  G   +YV    G   +RI+     +  +P  
Sbjct: 292 RAIASGPGIDVSPSFDASGRTMAYVSDETGSPNIYVKDVGGGSGRRITSSGYNT--NPSI 349

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGD 413
           SP G L+AFTK  G    + V      QE  +       + P+++P G  + F+  + G 
Sbjct: 350 SPDGKLVAFTKQMGGAQKVFVHDLGTGQETQVTSGGGSDENPSFAPDGYFIAFASTRSGQ 409

Query: 414 TGSKLYSIDLNGRNETLINTP-AYASDPQWVGF 445
              K+Y    +G    ++ T    A  P W   
Sbjct: 410 K--KIYVTTRHGAPPVMVPTGDGPAQMPSWGPL 440


>gi|254875813|ref|ZP_05248523.1| TolB protein [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254841834|gb|EET20248.1| TolB protein [Francisella philomiragia subsp. philomiragia ATCC
           25015]
          Length = 438

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 187/445 (42%), Gaps = 25/445 (5%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           NM+  +    + +            +V        P+    +  V +D+   +V+ ++  
Sbjct: 4   NMRKIITGFSIFVFLISSLYADLVAEVT-TGVIQKPLVTVISNNV-VDQFPQQVNSIIVS 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL  +        DS K +I    +IP    W SL +  +V  +  K+  +   +E +++
Sbjct: 62  DLNHNGKLQ--GDDSIKYEINQSQNIP----WKSLKSDYVVLTKYTKDSNNSYTIEVQIY 115

Query: 132 DVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI-- 188
              D   I    + +   +  R +AH +++ +YQ +TGE+G F +++ +V  S       
Sbjct: 116 KRNDTSYIRSITYKNISTTLVRPLAHKVANYVYQKLTGEQGFFLTKLAYVQVSNPYARYG 175

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L + D DG N   +    D  +  P +S + + + Y++Y     + VY ++    +
Sbjct: 176 RIYELVISDYDGYNKHTVLRQSDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLEIATGK 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINIS 306
              RI NF+ +  +P FS NGK   +++ K   +  +IY ++L + A +R+T    IN +
Sbjct: 235 -VTRISNFKGINSSPSFSPNGKEIALALSKGYSDQTNIYILNLATKALKRITIN-GINTA 292

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFT 364
             +SP+   IVF SDR+G+  +YV   N    +  ++S      Y +P ++P G  I F 
Sbjct: 293 PKFSPNGQSIVFTSDRDGRPNIYVAPVNSRYPQSSKLSSRIYQGY-EPNYTPDGKDIVFM 351

Query: 365 KFS-GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S      I            +    +  +PT SP G  + +    +    S L  + L
Sbjct: 352 NQSRSSGTQIADFNLANGSVTNITNGKSDSSPTVSPFGNMIAYIST-NSRGYSSLDMVSL 410

Query: 424 NGRNETLINTPAYA----SDPQWVG 444
           +G N   ++T          P W  
Sbjct: 411 DGDNHFNVDTANNGNILIQSPSWSP 435


>gi|254369035|ref|ZP_04985048.1| protein tolB precursor [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121956|gb|EDO66126.1| protein tolB precursor [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 439

 Score =  260 bits (665), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 104/450 (23%), Positives = 182/450 (40%), Gaps = 26/450 (5%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +   +   I    + V +       + A V          P+    +  V +D+   +V+
Sbjct: 1   MRNGMRKIIAGVFIFVFLISNLYADLVAEVT---TGVIQKPLVTVVSDNV-VDQFPQQVN 56

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            V+  DL  +      + D+ K +I    +IP    W SL +  +V  +      +   V
Sbjct: 57  SVIVADLNHNAKLQ--ANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYTNNSYNNYTV 110

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESV- 184
           E ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F +++ +V  S  
Sbjct: 111 EVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTKLAYVKVSNL 170

Query: 185 -VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                    L + D DG N   +    D  +  P +S + + + Y++Y     + VY ++
Sbjct: 171 YARYGRLYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLE 229

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
               +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L + A +R+T   
Sbjct: 230 IATGK-VTRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLATKALKRITIN- 287

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDL 360
            IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    ++P ++P G  
Sbjct: 288 GINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYEPNYTPDGKN 347

Query: 361 IAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           I F   S       I            +       +PT SP G  + +         S L
Sbjct: 348 IVFMNQSSRTSGTQIADFNLVNGSVTNITNGKADSSPTVSPYGDMVAYISTNT-RGYSSL 406

Query: 419 YSIDLNGRN----ETLINTPAYASDPQWVG 444
             + L+G N    ET  N       P W  
Sbjct: 407 DMVSLDGDNHFNIETADNGNILIQSPSWSP 436


>gi|187931255|ref|YP_001891239.1| group A colicin translocation; tolB protein [Francisella tularensis
           subsp. mediasiatica FSC147]
 gi|226705884|sp|B2SET5|TOLB_FRATM RecName: Full=Protein tolB; Flags: Precursor
 gi|187712164|gb|ACD30461.1| group A colicin translocation; tolB protein [Francisella tularensis
           subsp. mediasiatica FSC147]
          Length = 435

 Score =  260 bits (664), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 102/444 (22%), Positives = 181/444 (40%), Gaps = 24/444 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M+  +  + + +            +V        P+    +  V +D+   +V+ V+  D
Sbjct: 1   MRKIIAGVFIFVFLISNLYADLVAEVT-TGVIQKPLVTVVSDNV-VDQFPQQVNFVIVAD 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L  +      + D+ K +I    +IP    W SL +  +V  +      +   VE ++  
Sbjct: 59  LNHNAKLQ--ANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYTNNSYNNYTVEVQILK 112

Query: 133 VKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--I 189
             D   +    + +   S  R +AH IS+ +YQ +TG +G F +++ +V  S        
Sbjct: 113 RNDTSYLQAITYKNINVSLMRALAHKISNYVYQKLTGNQGFFLTKLAYVKVSNPYARYGR 172

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L + D DG N   +    D  +  P +S + + + Y++Y     + VY ++    + 
Sbjct: 173 LYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLEIATGK- 230

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISA 307
             RI N++ +  +P FS +GK   +++ K   +  +IY ++L + A +R+T    IN + 
Sbjct: 231 VTRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLSTKALKRITIN-GINTAP 289

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +SP+   IVF SDREG+  +YV   N    Q  I   K    ++P ++P G  I F   
Sbjct: 290 KFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYEPNYTPDGKNIVFMNQ 349

Query: 367 SGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           S       I            +       +PT SP G  + +         S L  + L+
Sbjct: 350 SSRTSGTQIADFNLANGSVTNITNGKADSSPTVSPYGDMVAYISTNT-RGYSSLDMVSLD 408

Query: 425 GRN----ETLINTPAYASDPQWVG 444
           G N    ET  N       P W  
Sbjct: 409 GDNHFNIETADNGNILIQSPSWSP 432


>gi|134302258|ref|YP_001122227.1| beta propeller repeat-containing outer membrane protein
           [Francisella tularensis subsp. tularensis WY96-3418]
 gi|166229978|sp|A4IYV5|TOLB_FRATW RecName: Full=Protein tolB; Flags: Precursor
 gi|134050035|gb|ABO47106.1| outer membrane protein/ tol-pal system beta propeller repeat
           protein [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 435

 Score =  259 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 103/444 (23%), Positives = 181/444 (40%), Gaps = 24/444 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M+  +  + + +         A V   T      P+    +  V +D+   +V+ V+  D
Sbjct: 1   MRKIIAGVFIFVFLISNLYA-ALVAEVTTGVIQKPLVTVVSDNV-VDQFPQQVNSVIVAD 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L  +      + D+ K +I    +IP    W SL +  +V  +      +   VE ++  
Sbjct: 59  LNHNAKLQ--ANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYTNNSYNNYTVEVQILK 112

Query: 133 VKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--I 189
             D   +    + +   S  R +AH IS+ +YQ +TG +G F +++ +V  S        
Sbjct: 113 RNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTKLAYVKVSNPYARYGR 172

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L + D DG N   +    D  +  P +S + + + Y++Y     + VY ++    + 
Sbjct: 173 LYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLEIATGK- 230

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISA 307
             RI N++ +  +P  S +GK   +++ K   +  +IY ++L + A +R+T    IN + 
Sbjct: 231 VTRITNYKGINSSPSLSPDGKEIALALSKGYSDQTNIYIMNLSTKALKRITIN-GINTAP 289

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +SP+   IVF SDREG+  +YV   N    Q  I   K    ++P ++P G  I F   
Sbjct: 290 KFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYEPNYTPDGKNIVFMNQ 349

Query: 367 SGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           S       I            +       +PT SP G  + +         S L  + L+
Sbjct: 350 SSRTSGTQIADFNLANGSVTNITNGKADSSPTVSPYGDMVAYISTNT-RGYSSLDMVSLD 408

Query: 425 GRN----ETLINTPAYASDPQWVG 444
           G N    ET  N       P W  
Sbjct: 409 GDNHFNIETADNGNILIQSPSWSP 432


>gi|303248655|ref|ZP_07334909.1| WD40 domain protein beta Propeller [Desulfovibrio fructosovorans
           JJ]
 gi|302489911|gb|EFL49837.1| WD40 domain protein beta Propeller [Desulfovibrio fructosovorans
           JJ]
          Length = 440

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 98/441 (22%), Positives = 179/441 (40%), Gaps = 20/441 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFT-KFVSIDEL--GGKVSEVV 69
           + +   L ++L            + V       + +++     F    ++    K+ +++
Sbjct: 10  ISVFGALFMLLGILSGRAPAQTSLAVDIQGPGQAKMNLVQARPFADGGQMTPADKLQDLI 69

Query: 70  SKDLQRSDVFNLISQDSFKQKITNP-DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +KDLQ      L+   +   +I         F+ ++     VLVT +    G +   VE 
Sbjct: 70  NKDLQFLPFLQLVPPSNIPGQIGGATADQIDFKPFSMGKIDVLVTSKWTP-GGNLGNVEL 128

Query: 129 RLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           R ++V  +K I+GK +   + A    IA     ++  ++TG+ G FNS+I FV  S   G
Sbjct: 129 RAFEVYSQKVIVGKGYDSVTDAQLPDIADRFCMELMAALTGQGGFFNSQIAFVKPSSGKG 188

Query: 188 IIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                +  +   G  +  +T   +  +   P +S + + +A+           YL     
Sbjct: 189 ---TDIWTVRPTGRGLTRITHYNELGMAESPAWSFDGRSIAFTLIGSR---SHYLGVWSG 242

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
              P+      + +++PRF  NG +  +SV+     DIY ++        L     IN+S
Sbjct: 243 GGKPQVYTLPSTNVVSPRFLPNG-QIAVSVRMHGKADIYLLNANHQPGRVLAGGPGINVS 301

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+    S + F +D+ G   +Y+   +G   +RI+     +  +P  SP G LIA+TK 
Sbjct: 302 PSFDASGSLMAFVNDQAGNPNIYLQNVSGGSPRRITPSGYNT--NPSLSPDGKLIAYTKQ 359

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            G    + V      Q+  +       + P++SP G  ++FS  + G    KLY    +G
Sbjct: 360 LGGAQKVFVHDMTTGQDTQVTSGGGSDENPSFSPDGYFIVFSSTRSGQK--KLYVTTRHG 417

Query: 426 RNETLINTP-AYASDPQWVGF 445
               +I T    A  P W   
Sbjct: 418 TPPIMIPTGDGTAQMPCWGPL 438


>gi|241667262|ref|ZP_04754840.1| group A colicin translocation; TolB protein [Francisella
           philomiragia subsp. philomiragia ATCC 25015]
          Length = 434

 Score =  259 bits (661), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 99/444 (22%), Positives = 186/444 (41%), Gaps = 25/444 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M+  +    + +            +V        P+    +  V +D+   +V+ ++  D
Sbjct: 1   MRKIITGFSIFVFLISSLYADLVAEVT-TGVIQKPLVTVISNNV-VDQFPQQVNSIIVSD 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L  +        DS K +I    +IP    W SL +  +V  +  K+  +   +E +++ 
Sbjct: 59  LNHNGKLQ--GDDSIKYEINQSQNIP----WKSLKSDYVVLTKYTKDSNNSYTIEVQIYK 112

Query: 133 VKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--I 189
             D   I    + +   +  R +AH +++ +YQ +TGE+G F +++ +V  S        
Sbjct: 113 RNDTSYIRSITYKNISTTLVRPLAHKVANYVYQKLTGEQGFFLTKLAYVQVSNPYARYGR 172

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L + D DG N   +    D  +  P +S + + + Y++Y     + VY ++    + 
Sbjct: 173 IYELVISDYDGYNKHTVLRQSDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLEIATGK- 230

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISA 307
             RI NF+ +  +P FS NGK   +++ K   +  +IY ++L + A +R+T    IN + 
Sbjct: 231 VTRISNFKGINSSPSFSPNGKEIALALSKGYSDQTNIYILNLATKALKRITIN-GINTAP 289

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTK 365
            +SP+   IVF SDR+G+  +YV   N    +  ++S      Y +P ++P G  I F  
Sbjct: 290 KFSPNGQSIVFTSDRDGRPNIYVAPVNSRYPQSSKLSSRIYQGY-EPNYTPDGKDIVFMN 348

Query: 366 FS-GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            S      I            +    +  +PT SP G  + +    +    S L  + L+
Sbjct: 349 QSRSSGTQIADFNLANGSVTNITNGKSDSSPTVSPFGNMIAYIST-NSRGYSSLDMVSLD 407

Query: 425 GRNETLINTPAYA----SDPQWVG 444
           G N   ++T          P W  
Sbjct: 408 GDNHFNVDTANNGNILIQSPSWSP 431


>gi|167009212|ref|ZP_02274143.1| TolB protein precursor [Francisella tularensis subsp. holarctica
           FSC200]
 gi|169656512|ref|YP_001427788.2| tol-pal system component, TolB protein [Francisella tularensis
           subsp. holarctica FTNF002-00]
 gi|290954015|ref|ZP_06558636.1| tol-pal system component, TolB protein [Francisella tularensis
           subsp. holarctica URFT1]
 gi|295312604|ref|ZP_06803357.1| tol-pal system component, TolB protein [Francisella tularensis
           subsp. holarctica URFT1]
 gi|164551580|gb|ABU60832.2| tol-pal system component, TolB protein [Francisella tularensis
           subsp. holarctica FTNF002-00]
          Length = 439

 Score =  259 bits (661), Expect = 9e-67,   Method: Composition-based stats.
 Identities = 104/450 (23%), Positives = 182/450 (40%), Gaps = 26/450 (5%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +   +   I    + V +       + A V          P+    +  V +D+   +V+
Sbjct: 1   MRNGMRKIIAGVFIFVFLISNLYADLVAEVT---TGVIQKPLVTVVSDNV-VDQFPQQVN 56

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            V+  DL  +      + D+ K +I    +IP    W SL +  +V  +      +   V
Sbjct: 57  SVMVADLNHNAKLQ--ANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYTNNSYNNYTV 110

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESV- 184
           E ++    D   +    + +   S  R +AH IS+ +YQ +TG +G F +++ +V  S  
Sbjct: 111 EVQILKRNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTKLAYVKVSNL 170

Query: 185 -VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                    L + D DG N   +    D  +  P +S + + + Y++Y     + VY ++
Sbjct: 171 YARYGRLYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLE 229

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
               +   RI N++ +  +P FS +GK   +++ K   +  +IY ++L + A +R+T   
Sbjct: 230 IATGK-VTRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLATKALKRITIN- 287

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDL 360
            IN +  +SP+   IVF SDREG+  +YV   N    Q  I   K    ++P ++P G  
Sbjct: 288 GINTAPKFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYEPNYTPDGKN 347

Query: 361 IAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           I F   S       I            +       +PT SP G  + +         S L
Sbjct: 348 IVFMNQSSRTSGTQIADFNLVNGSVTNITNGKADSSPTVSPYGDMVAYISTNT-RGYSSL 406

Query: 419 YSIDLNGRN----ETLINTPAYASDPQWVG 444
             + L+G N    ET  N       P W  
Sbjct: 407 DMVSLDGDNHFNIETADNGNILIQSPSWSP 436


>gi|261414610|ref|YP_003248293.1| TolB domain protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|261371066|gb|ACX73811.1| TolB domain protein [Fibrobacter succinogenes subsp. succinogenes
           S85]
 gi|302325965|gb|ADL25166.1| tol-pal system beta propeller repeat protein TolB [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 424

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 85/441 (19%), Positives = 178/441 (40%), Gaps = 26/441 (5%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL---GGKVSE 67
           +N    L + + +       +    + V    + +  + I    F     +         
Sbjct: 1   MNKIKLLFVFVAMALAAPAFAAIDTIAVDVGISVFQTMPIGVVPFEEEGTIKWTNEAPHL 60

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           ++++D   S  F  ++ D F   + +     ++           VTG   K    +++++
Sbjct: 61  ILTRDANLSGRFEAVNSDKFDLVLFSKKRARQY-----------VTGTATKLSNGKIKLD 109

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             L+  + +  ++G+ +   P   R+  H+  D +   + GE+G  ++++ +VS+     
Sbjct: 110 CYLYAAETKDVLLGESYTVKPYDVRQAVHSFFDKVVYRLFGERGVASTKLAYVSKI---- 165

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + + D DG + R +T     I   P +    + + Y  +  +      L      
Sbjct: 166 DGVKQVVISDYDGFSRRQITRDSS-INMMPVWQKGNKGLVYVNFRKQRP---NLYAITFG 221

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                +        +P  +      L SV +    ++Y  D+++ + ++  +     +S 
Sbjct: 222 GKETPLFTQFKQTFSPAVNPKTGELLFSVTEGAKTELYRGDMKTGSAQKFLHLKSNQVSP 281

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SP +S+++F SDR G  Q+Y +  +G+D +RI+     +     WSP+GD I +T   
Sbjct: 282 SWSPFASEVLFTSDRGGSPQVYAVGKDGTDVRRITYMGHYNERA-SWSPEGDRIVYTSMD 340

Query: 368 GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             K  I     DG+    L  +  N + PTWSP G+ + F+  + G    ++Y +  +G 
Sbjct: 341 DGKMNIYTCALDGTDIIQLTSNAGNNEHPTWSPDGKLIAFASDRGG--NYQIYIMRKDGS 398

Query: 427 NETLINTPAYASDPQWVGFMD 447
             T I   +  + P W  F D
Sbjct: 399 GVTRITNGSENTSPTWSWFFD 419


>gi|89255760|ref|YP_513122.1| TolB protein precursor [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314254|ref|YP_762977.1| TolB protein [Francisella tularensis subsp. holarctica OSU18]
 gi|254367130|ref|ZP_04983163.1| tolB protein precursor [Francisella tularensis subsp. holarctica
           257]
 gi|119371043|sp|Q2A580|TOLB_FRATH RecName: Full=Protein tolB; Flags: Precursor
 gi|122325710|sp|Q0BNJ4|TOLB_FRATO RecName: Full=Protein tolB; Flags: Precursor
 gi|89143591|emb|CAJ78774.1| TolB protein precursor [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129153|gb|ABI82340.1| TolB protein [Francisella tularensis subsp. holarctica OSU18]
 gi|134252953|gb|EBA52047.1| tolB protein precursor [Francisella tularensis subsp. holarctica
           257]
          Length = 435

 Score =  258 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 102/444 (22%), Positives = 181/444 (40%), Gaps = 24/444 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M+  +  + + +            +V        P+    +  V +D+   +V+ V+  D
Sbjct: 1   MRKIIAGVFIFVFLISNLYADLVAEVT-TGVIQKPLVTVVSDNV-VDQFPQQVNSVMVAD 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L  +      + D+ K +I    +IP    W SL +  +V  +      +   VE ++  
Sbjct: 59  LNHNAKLQ--ANDTIKYEIKQKQNIP----WKSLKSDYVVLTKYTNNSYNNYTVEVQILK 112

Query: 133 VKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESV--VSGII 189
             D   +    + +   S  R +AH IS+ +YQ +TG +G F +++ +V  S        
Sbjct: 113 RNDTSYLQAITYKNINVSLMRTLAHKISNYVYQKLTGNQGFFLTKLAYVKVSNLYARYGR 172

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L + D DG N   +    D  +  P +S + + + Y++Y     + VY ++    + 
Sbjct: 173 LYELIISDYDGYNKHVVLRQTDNPIATPSWSNDGRYIVYSSYS-GGSMGVYTLEIATGK- 230

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISA 307
             RI N++ +  +P FS +GK   +++ K   +  +IY ++L + A +R+T    IN + 
Sbjct: 231 VTRITNYKGINSSPSFSPDGKEIALALSKGYSDQTNIYIMNLATKALKRITIN-GINTAP 289

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +SP+   IVF SDREG+  +YV   N    Q  I   K    ++P ++P G  I F   
Sbjct: 290 KFSPNGQSIVFTSDREGRPNIYVASVNSKYPQSSILSTKIHQAYEPNYTPDGKNIVFMNQ 349

Query: 367 SGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           S       I            +       +PT SP G  + +         S L  + L+
Sbjct: 350 SSRTSGTQIADFNLVNGSVTNITNGKADSSPTVSPYGDMVAYISTNT-RGYSSLDMVSLD 408

Query: 425 GRN----ETLINTPAYASDPQWVG 444
           G N    ET  N       P W  
Sbjct: 409 GDNHFNIETADNGNILIQSPSWSP 432


>gi|320107208|ref|YP_004182798.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319925729|gb|ADV82804.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
          Length = 444

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 100/445 (22%), Positives = 187/445 (42%), Gaps = 32/445 (7%)

Query: 19  LLLVLIGGFFPTSIHAFVKV-ATNSANYSPVSIAFTKFVS----IDELGGKVSEVVSKDL 73
           + +V+    F     A   V          + +A   F         L      V+  DL
Sbjct: 10  MWMVVAFAAFSRYGSAQDNVFTGTEKGVDRIRVAAADFKPFSADSAALKATFDSVLYADL 69

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNS--LGAQVLVTGRVIKEGKDRLRVEFRLW 131
            ++ +F+L+S+    Q      S      W++    A ++  G +  +   RL V   L+
Sbjct: 70  AQAGIFDLVSKSLLPQLTPGAPSEMNVTQWSANPTNAAMVAFGSLGIKS-GRLIVNGWLF 128

Query: 132 DVKDRK--QIIGKKFF--SSPASWRKIAHTISDDIYQSITG-EKGDFNSRILFVSESVVS 186
           D K+ +  Q++GK++   ++  S R+IAH  +D+I   + G   G   ++I++V      
Sbjct: 129 DAKNTQYPQVLGKQYAEDANDNSAREIAHKFADEIILRLGGGIPGIAETKIVYVH----G 184

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     + +MD DGAN   +T     +   PR SP+  ++A+++   E   ++ +    +
Sbjct: 185 GSGSKEIWMMDYDGANPHPVTH-LGTVSLSPRISPDNSRIAFSSLGREG-FQIRVFSLLL 242

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +R            L+P +S+NG +   S  +    +I+  D   +   R+T+    ++S
Sbjct: 243 NRMIAFPA-AAGTNLSPAWSANGAQIAYSSSRSGDPEIWIADSNGSGPRRVTSFRGPDVS 301

Query: 307 ASYSPD-SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++P   SQI + S R G  QLY M ++G+   R++    A+   P WSP G  + F  
Sbjct: 302 PVWNPKTGSQIAWISGRTGLPQLYTMDADGAGVTRMTDGGYAT--SPSWSPNGQFLTFAW 359

Query: 366 FS------GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                        I VM+    +   L  D      P+WSP GR ++++    G    ++
Sbjct: 360 DRKYGPGAPGGQDIYVMEIASKRWIQLTHDTGRCDFPSWSPDGRHIVYASNAGGRW--EI 417

Query: 419 YSIDLNGRNETLINTPAYASDPQWV 443
           +++  +G     ++T      P W 
Sbjct: 418 WTMLADGTQRHKLSTNGANDMPNWS 442


>gi|225872181|ref|YP_002753636.1| tolB protein, putative [Acidobacterium capsulatum ATCC 51196]
 gi|225793038|gb|ACO33128.1| tolB protein, putative [Acidobacterium capsulatum ATCC 51196]
          Length = 465

 Score =  256 bits (655), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 92/425 (21%), Positives = 173/425 (40%), Gaps = 32/425 (7%)

Query: 39  ATNSANYSPVSIAFTKFVSIDELGGKV------SEVVSKDLQRSDVFNLISQDSFKQKIT 92
              +     + +A   F                 +V+  DL+ + +F+++S+      + 
Sbjct: 51  TGTNLGVQRIRLAVAGFKPGTNDSQTFVLKSIFDQVLYSDLENAGIFDMVSKSMAPPAMP 110

Query: 93  NPDSIPRFQDWNSL--GAQVLVTGRVIKEGKDRLRVEFRLWDVKDR--KQIIGKKFFS-- 146
                     W+     AQ++  G +   G  +L V+  L+D K+    Q++GK++ +  
Sbjct: 111 GSPKELVLSQWSQPPSNAQMVAFGTLGVSG-GQLTVQGYLYDTKNADTPQVLGKQYSAQA 169

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           + +  R IAH  +D+I   + G  G   ++I +V        +   + VMD DGAN + +
Sbjct: 170 NESDARDIAHRFADEIILRLGGIPGIAQTKIYYVVGRG----MHKEIWVMDYDGANKQQV 225

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T         P  SP+  K+A+ T+  +  +++ +    + R    + +     ++P +S
Sbjct: 226 THLGSD-SMAPAVSPDNSKLAFETFG-KYGMQIRIYSLLLHRYLHFV-SPGGTTISPSWS 282

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD-SSQIVFESDREGK 325
            +G     S       DIY  D       R+T     N    ++P   +QI +ES     
Sbjct: 283 PDGIHLAYSSSGAGNPDIYVSDANGMNRHRITAFRGPNAQPVWNPKTGAQIAWESGMTSL 342

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVMKKD 379
            Q+Y M ++GS+  R++    A    P WSP G  +AF               I +M   
Sbjct: 343 PQIYTMDADGSNVSRLTDGGYA--VSPSWSPNGQFLAFAWDRHYGPGAPGGEDIYIMDIT 400

Query: 380 GSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             +   L         P+W+P GR ++F R + G T   ++S+  NG+ +  +     ++
Sbjct: 401 THRWVQLTHGQGVNDFPSWAPDGRHIVFQRTEGGRT--DIWSMLANGQQQEQLTHNGSST 458

Query: 439 DPQWV 443
            P W 
Sbjct: 459 MPDWS 463



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 81/225 (36%), Gaps = 51/225 (22%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF----------- 318
            +    V +    +I+ +D      +++T+    +++ + SPD+S++ F           
Sbjct: 198 TKIYYVVGRGMHKEIWVMDYDGANKQQVTHLGSDSMAPAVSPDNSKLAFETFGKYGMQIR 257

Query: 319 ---------------------------------ESDREGKEQLYVMQSNGSDQKRISQDK 345
                                             S   G   +YV  +NG ++ RI+  +
Sbjct: 258 IYSLLLHRYLHFVSPGGTTISPSWSPDGIHLAYSSSGAGNPDIYVSDANGMNRHRITAFR 317

Query: 346 EASYFDPVWSPQ-GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             +   PVW+P+ G  IA+         I  M  DGS    L +     +P+WSP+G+ L
Sbjct: 318 GPNA-QPVWNPKTGAQIAWESGMTSLPQIYTMDADGSNVSRLTDGGYAVSPSWSPNGQFL 376

Query: 405 IFSRKK----DGDTGSKLYSIDLNG-RNETLINTPAYASDPQWVG 444
            F+  +        G  +Y +D+   R   L +       P W  
Sbjct: 377 AFAWDRHYGPGAPGGEDIYIMDITTHRWVQLTHGQGVNDFPSWAP 421


>gi|319779142|ref|YP_004130055.1| tolB protein precursor [Taylorella equigenitalis MCE9]
 gi|317109166|gb|ADU91912.1| tolB protein precursor [Taylorella equigenitalis MCE9]
          Length = 415

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 109/437 (24%), Positives = 186/437 (42%), Gaps = 34/437 (7%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSAN--YSPVSIAFTKFVSIDELGGKVSEVVSK 71
           K    L        +     A V+V  +  N   + + I    F+     G +++++V+K
Sbjct: 8   KFIAFLAFTTFAFLYSQITFAQVEVPLSGVNTVDNRLPIYVADFMGP--RGKQIADIVAK 65

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL  S  FN+    S  +   +     +  D  S GA  +VTG       ++  V +R  
Sbjct: 66  DLTNSGQFNVTRIASISKDPHDKLDWDKLVDL-SKGAN-IVTGF-----DNKDHVHYRFL 118

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           D   +K  + ++   S  S R IAH ISD  Y+   G KG F+++I FVS          
Sbjct: 119 DPIQQK--VREEARVSNPSQRAIAHKISDYAYEQSIGLKGAFSTKIAFVSGR-------- 168

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           SL + D DG N + L      I   P +SP+  K+AY +++    + VY+          
Sbjct: 169 SLYISDYDGHNAKVLVSGATII--SPAWSPDGSKIAYVSFESGKPI-VYVQQLSTGVRI- 224

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASY 309
            + +F+    AP +S +G    +++ +D   DIY V  D  + +   L+++  I     +
Sbjct: 225 PVASFKGNNSAPAWSPSGVSLAVALSRDALSDIYLVSSDGTTKSPRSLSSSPEIETEPFF 284

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++S +VF SDR G  Q+Y    N     RI+ +   +   P  SP  + + FT     
Sbjct: 285 FPNNSGLVFVSDRGGSPQIYKSGLNNGPASRITFNGSQNL-SPRISPDSNSLVFTSLRKG 343

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           K+ I +M      ER++    +  +PT+SP+G +++          S + +  +      
Sbjct: 344 KYVIALMNLASGDERIISSGPDDLSPTFSPNGMNVMHVSSGKIKISSTVSNFSIT----- 398

Query: 430 LINTPAYASDPQWVGFM 446
            I T    S   W  F+
Sbjct: 399 -IPTQGAVSAVAWGPFI 414


>gi|251772667|gb|EES53231.1| putative TolB protein [Leptospirillum ferrodiazotrophum]
          Length = 438

 Score =  252 bits (644), Expect = 9e-65,   Method: Composition-based stats.
 Identities = 104/447 (23%), Positives = 190/447 (42%), Gaps = 21/447 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG---G 63
           +   L   +   +LL  +    P +  A       +       I     +   E+     
Sbjct: 1   MRRYLLSVLMTGMLLGGMLLAPPPAAKAVDLSVITNETRLSFKIVLVGNMDHKEISLLTK 60

Query: 64  KVSEVVSKDLQRSDVFNLI--SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           +   +V +DL  +  F ++        Q  + P           +GA+ +V G       
Sbjct: 61  RGEALVRRDLLETGYFEILTPPPAVLSQLASEPLDSITAHAVAPMGAEGVV-GMQFSLEN 119

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
           D +++   + D  +   ++ K + +S   +  + H   DDI     G +G   SRI F+ 
Sbjct: 120 DGVQLHGVVRDPLNGAILLDKIYRTS-GKYALVVHKFVDDILFQFAGIRGVATSRIAFIG 178

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +         L  MD DG N R +T   + + F P +S N+  + Y TY   +   +  
Sbjct: 179 RTSHG----YDLFTMDFDGENTRRMTFD-NVLAFNPAWSHNKHHILYVTYLHGEPQIIDY 233

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERLT 298
              R  R    + ++  + + P FS +GKR  +++ +    +   IY     +   ERLT
Sbjct: 234 DLVRGQRH--LLFSYPGLNITPTFSPDGKRLAVALSRGRPSQHTQIYLYAFATKHLERLT 291

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +   N+S ++SP  + + F SDR+G  Q+++M S+GS+  R++ +   +   P WSP+G
Sbjct: 292 YSRSNNLSPTFSPSGNALAFVSDRDGHPQIFLMDSDGSNVHRLTFNGSYNV-APAWSPRG 350

Query: 359 DLIAFTKFSG-EKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           D IA+   +   +  I ++  DG+   ++ +      +P+WSP GR L+++R+  G +  
Sbjct: 351 DWIAYVCMNDMHRPKICLISPDGTSRVMITQGPGRDDSPSWSPDGRFLVYTRQIRGHSKL 410

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWV 443
               ID +GR E L N       P W 
Sbjct: 411 AKIWIDGHGR-EFLGNYSRSVLTPSWS 436



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 75/188 (39%), Gaps = 14/188 (7%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R     +     D++++D     T R+T    +  + ++S +   I++ +   G+ Q+ 
Sbjct: 172 SRIAFIGRTSHGYDLFTMDFDGENTRRMTFDNVLAFNPAWSHNKHHILYVTYLHGEPQII 231

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQ-ERL 385
                   Q+ +          P +SP G  +A     G       I +        ERL
Sbjct: 232 DYDLVRG-QRHLLFSYPGLNITPTFSPDGKRLAVALSRGRPSQHTQIYLYAFATKHLERL 290

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYAS 438
               SN  +PT+SPSG +L F   +DG    +++ +D +G N   +         PA++ 
Sbjct: 291 TYSRSNNLSPTFSPSGNALAFVSDRDGH--PQIFLMDSDGSNVHRLTFNGSYNVAPAWSP 348

Query: 439 DPQWVGFM 446
              W+ ++
Sbjct: 349 RGDWIAYV 356


>gi|323698025|ref|ZP_08109937.1| WD40 domain protein beta propeller [Desulfovibrio sp. ND132]
 gi|323457957|gb|EGB13822.1| WD40 domain protein beta propeller [Desulfovibrio desulfuricans
           ND132]
          Length = 435

 Score =  249 bits (636), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 82/448 (18%), Positives = 167/448 (37%), Gaps = 32/448 (7%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID------EL 61
            + + + I  CLL+ L   F   S    + V  +      V+I       +D        
Sbjct: 1   MKRITILIAACLLVCLAAAF--ASAQGPLTVDIHGPGQRMVNIVLLPPKGLDGQPVPEAA 58

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITN---PDSIPRFQDWNSLGAQVLVTGRVIK 118
                E+V+ DL       L+   +      +         F+        + +T     
Sbjct: 59  AKAFEELVANDLGYIPFLKLVPVTTLLGGDPSRGVTAQDIDFKPLQLARVDLCLT----- 113

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
            G +   +E R+++    ++++GK +         +A        +++TG+KG F+S I 
Sbjct: 114 TGWNGQYLEARVYETFGGRRVVGKAYRDVADKLPMVADRFCSAFLEALTGKKGFFDSPIA 173

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDIL 237
           FV +   +      +  +   G  +  ++         P +S     +A+    +    L
Sbjct: 174 FVKQDGKA----KEIYTVLPQGRGLTQISD-LGGFNLSPAWSAEGDLIAFTHIGNDRHEL 228

Query: 238 RVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            +Y   T      +RI       +++P +   G     S+  +   +IY +       +R
Sbjct: 229 CIYEAKT---HKIRRIAKGLGDTVISPVYGP-GDVLYASLNLNGTTNIYELSKSYKVGKR 284

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L  + +I++S S+    S++ F S R G   +Y++       +R++   + +   P  SP
Sbjct: 285 LGASPYIDVSPSFDRTGSKMAFTSGRAGNPHIYLLDMQSGQVRRVTTTGKYN-THPCLSP 343

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            G  +A+T  + +   I +   +  +E+ L     N + P + P G  + F+  + G   
Sbjct: 344 DGRYVAYTHQTSDGHRIFLHDLETGREKQLTFGPGNDEYPAFGPDGYFIAFASSRTG--A 401

Query: 416 SKLYSIDLNGRNETLINTP-AYASDPQW 442
            +LY    +G     I+T    A  P W
Sbjct: 402 YQLYLTTRHGDTPRRISTGKGAAFAPAW 429



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 7/136 (5%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S++ F   S  +G     L  M   G   R  T  +      P  SP+ + VAY  +   
Sbjct: 302 SKMAF--TSGRAGNPHIYLLDMQS-GQVRRVTTTGK--YNTHPCLSPDGRYVAYT-HQTS 355

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D  R++L D    R  K++         P F  +G     +  +  A  +Y      +  
Sbjct: 356 DGHRIFLHDLETGRE-KQLTFGPGNDEYPAFGPDGYFIAFASSRTGAYQLYLTTRHGDTP 414

Query: 295 ERLTNTLFINISASYS 310
            R++       + ++ 
Sbjct: 415 RRISTGKGAAFAPAWD 430



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 25/85 (29%), Gaps = 1/85 (1%)

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLY 419
           IAF K  G+   I  +   G     + +      +P WS  G  + F+   +      +Y
Sbjct: 172 IAFVKQDGKAKEIYTVLPQGRGLTQISDLGGFNLSPAWSAEGDLIAFTHIGNDRHELCIY 231

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
               +               P +  
Sbjct: 232 EAKTHKIRRIAKGLGDTVISPVYGP 256


>gi|258405705|ref|YP_003198447.1| WD40 domain-containing protein beta Propeller [Desulfohalobium
           retbaense DSM 5692]
 gi|257797932|gb|ACV68869.1| WD40 domain protein beta Propeller [Desulfohalobium retbaense DSM
           5692]
          Length = 437

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 84/450 (18%), Positives = 172/450 (38%), Gaps = 25/450 (5%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPV-----SIAFTKFVSIDELG 62
              + + I  CLL +     FP      +++         +      +A     +  +  
Sbjct: 1   MRSIYLVIIACLLCLCA---FPAQAQQQIEIDIYGPGQQQLNMYTAPVAALSGPAPGQPA 57

Query: 63  GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI---PRFQDWNSLGAQVLVTGRVIKE 119
             + + +  +L                             F+ +      +L++     +
Sbjct: 58  EALRQTILDNLGFLPFLAQTESSDVLGGTGLKGVRKKDIDFKRFRLARVDLLLSIGWKPQ 117

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
                 VE RL+DV  ++ ++GK +          +A     +I  ++ G    F SR+ 
Sbjct: 118 SGGLGLVELRLFDVFSQRLMLGKGYRIMDQEQVDVVADRFCAEIVDTLAGNGDVFRSRLA 177

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           FV ++  +     ++  +   G + + +T   + +   P +S + +++A+   D+    R
Sbjct: 178 FVRQNSTA----KNIWTVGVQGRDPKQITR-LEGVSMSPAWSWDGRRMAFTYLDERR-HR 231

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           + L D    +    +    ++ ++P FS  G + ++S+      DI+++         L 
Sbjct: 232 LGLWDRDAGQIKAMVLPGNTL-ISPVFSPQG-QVVLSLDPYGNPDIFTLSDDWTIESPLV 289

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               I+IS  +     ++VF S R G   ++V   +  + +R+S +   +   P  SP G
Sbjct: 290 RHWGIDISPQFDEKGEKMVFVSSRLGNPHIFVRDMDSGEVERVSFEGTYN-TSPTISPDG 348

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             +A+++ + +   I V   +    R + +   N + PTW+P G  L FS  + G    K
Sbjct: 349 RFVAYSRRTDDGHRIVVHDLESGASRQITKGPGNDEDPTWAPDGYFLAFSSNRSGT--YK 406

Query: 418 LYSIDLNGRNETLINT-PAYASDPQWVGFM 446
           LY    NG     I T P  A+ P W   M
Sbjct: 407 LYLTTRNGDTPKQIPTGPGAATAPAWGPPM 436


>gi|118588326|ref|ZP_01545735.1| translocation protein TolB precursor [Stappia aggregata IAM 12614]
 gi|118439032|gb|EAV45664.1| translocation protein TolB precursor [Stappia aggregata IAM 12614]
          Length = 260

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 93/237 (39%), Positives = 137/237 (57%), Gaps = 5/237 (2%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF---VSIDELGGKVSEVVSK 71
             L  +L       P    A V++     N  P+ IA   F       +L   ++ V++ 
Sbjct: 17  RGLAFVLASFVVIAPLPAAALVEIDITQGNIEPLPIALPSFSAEGGDGKLAADMTNVIAA 76

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+RS +F  +   SF QK  + +S PRF DW  + AQ LVTG V K+   RLR EFRLW
Sbjct: 77  DLKRSGLFRPLDPASFIQKNMSVNSTPRFGDWRQISAQALVTGTVTKQPDGRLRAEFRLW 136

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           DV   +Q++G++F+++P +WR++AH I+D IY+ +TGEKG F++RI+FV E+        
Sbjct: 137 DVFAAEQMLGQQFYTTPDNWRRLAHIIADAIYERLTGEKGYFDTRIVFVDETGPKDKRVK 196

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            L +MD+DGAN+RYLT   D ++  PRFSP  Q++ Y +Y   D   VYL++   D 
Sbjct: 197 RLAIMDQDGANVRYLTRG-DDLVLTPRFSPTSQEITYMSYGGTDP-SVYLLNIETDS 251



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 7/70 (10%)

Query: 359 DLIAFTKFSGEKF----AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGD 413
             I F   +G K      + +M +DG+  R L    + +  P +SP+ + + +     G 
Sbjct: 180 TRIVFVDETGPKDKRVKRLAIMDQDGANVRYLTRGDDLVLTPRFSPTSQEITYMSY--GG 237

Query: 414 TGSKLYSIDL 423
           T   +Y +++
Sbjct: 238 TDPSVYLLNI 247


>gi|206602338|gb|EDZ38819.1| Putative TolB protein [Leptospirillum sp. Group II '5-way CG']
          Length = 447

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 120/455 (26%), Positives = 212/455 (46%), Gaps = 30/455 (6%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
           ++R ++   L   I+LC +L+  G FFP    A       +       +++    + +  
Sbjct: 6   AIRTWLHRALG--ISLCAILIGGGLFFPARARAVNLNVITNQTALFFKLSYVSLGARNLS 63

Query: 62  GGKV---SEVVSKDLQRSDVFNLIS-----QDSFKQKITNPDSIPRFQDWNSLGAQVLVT 113
             +V   + ++ +DL+ +  F ++      Q S    +   DS+ +     S G + +  
Sbjct: 64  PSEVRYANALIVRDLEETGYFEIVPLSSGDQRSLGNMVLTGDSVRKLA---SSGLEGVAG 120

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            ++IK+      V   + D  +   ++ +K+ ++  + R I H   DDI    TG KG  
Sbjct: 121 AQLIKDDLGTHLVGI-VRDPVNGTVLLSRKYTTT-GNIRVIIHRFVDDIVFQFTGFKGVA 178

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++RI F+ ++   G     L VMD DG  I  LT  R  + + P +S ++  + Y +Y  
Sbjct: 179 DARIAFIGKNRRRG---YDLYVMDFDGEGIHRLTWDR-VLAYTPAWSLSRHLIVYTSYLH 234

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE---AMDIYSVDLQ 290
            +  ++   D    R    +  F  + + P FS N     +++ K +     +IYS D++
Sbjct: 235 SEP-QILSYDLSTGRRS-PLARFPGLNITPNFSRNSAMLAMALSKSQTSQNTEIYSYDMK 292

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            +  ERLT +   N+S S+SPD SQIVF SDR+G  Q++VM S+GS++ RIS     +  
Sbjct: 293 YHRFERLTYSHSNNLSPSWSPDGSQIVFVSDRDGHPQIFVMDSDGSNEHRISFTGFYNV- 351

Query: 351 DPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSR 408
            P WSP+GD IA+   +   +  I +    G +   L        +P WSP GR+++F+ 
Sbjct: 352 SPSWSPRGDAIAYVCMNERHRPKICLTTPTGDRSLQLTHGSGQDDSPDWSPDGRTILFTH 411

Query: 409 KKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQW 442
           +  G   S +  + L+G +   L + P     P W
Sbjct: 412 QVKGH--SYIEKMFLDGTHVHRLGSYPHSVITPVW 444



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 5/134 (3%)

Query: 315 QIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +I F   +R     LYVM  +G    R++ D+  +Y  P WS    LI +T +   +  I
Sbjct: 181 RIAFIGKNRRRGYDLYVMDFDGEGIHRLTWDRVLAYT-PAWSLSRHLIVYTSYLHSEPQI 239

Query: 374 GVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFS-RKKDGDTGSKLYSIDLNG-RNETL 430
                   +   L         P +S +   L  +  K      +++YS D+   R E L
Sbjct: 240 LSYDLSTGRRSPLARFPGLNITPNFSRNSAMLAMALSKSQTSQNTEIYSYDMKYHRFERL 299

Query: 431 INTPAYASDPQWVG 444
             + +    P W  
Sbjct: 300 TYSHSNNLSPSWSP 313


>gi|189220463|ref|YP_001941103.1| Periplasmic component of the Tol biopolymer transport system
           [Methylacidiphilum infernorum V4]
 gi|189187321|gb|ACD84506.1| Periplasmic component of the Tol biopolymer transport system
           [Methylacidiphilum infernorum V4]
          Length = 365

 Score =  242 bits (618), Expect = 7e-62,   Method: Composition-based stats.
 Identities = 98/401 (24%), Positives = 173/401 (43%), Gaps = 50/401 (12%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
           ++A V+V               +F   D       ++VS+DL ++ +  +          
Sbjct: 2   LYAQVEVTGGKVRVF-----LEQFQGKD--AENCRKIVSRDLLQTLLVEV---------- 44

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
            +P+   R++          +T R+  +      +E  L D   +++++ K F    A  
Sbjct: 45  -SPEENQRYE----------ITARLSDKA-----LEGILVDKVKKRELLHKSFVG--AEM 86

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R+ AH  SD + +++TG KG  + +I F+S           L +MD DG  ++ LT  + 
Sbjct: 87  RQSAHLFSDALLEALTGIKGFSSCKIAFISSETG----FKELYMMDMDGEGLQRLTADK- 141

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I   PR+S +   +AY +Y       VY++         R   F  +     FS + + 
Sbjct: 142 TISAHPRWSHDHSMIAYTSYKSG-YPDVYIIKLAKHSRI-RFSFFPGVNSGASFSPDDQN 199

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +++ KD   +IY + +      +LT     N S  +SPD  QIV+ SD  G  QLY++
Sbjct: 200 IALTLSKDGNPEIYIMGIDGGPPRQLTRNRATNTSPCWSPDGKQIVYTSDERGSIQLYII 259

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            + G   KR+      S  +P WS  G  IAF+   G +F IG+   + +Q  +L     
Sbjct: 260 SAEGGQPKRLITGNTYS-SEPDWSADGQKIAFSARIGGQFQIGIFNLNTNQASILTTQGG 318

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            + P+W+P+ R L+++ +        LY +D   R    +N
Sbjct: 319 -EDPSWTPNSRHLVYASQ------GSLYLMDTVSRQSIKLN 352


>gi|332974349|gb|EGK11279.1| WD40 domain protein [Psychrobacter sp. 1501(2011)]
          Length = 443

 Score =  242 bits (618), Expect = 8e-62,   Method: Composition-based stats.
 Identities = 107/434 (24%), Positives = 184/434 (42%), Gaps = 26/434 (5%)

Query: 18  CLLLVLIGGFFPTSIHAF----VKVATNS-ANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           C LL   G     S HA     +++  +     +   +AF  F         +S ++ KD
Sbjct: 26  CALLASAGLLVGISAHAEEDYDLELTISKKGEVNQNQVAFVPFAGDSG----ISSIIQKD 81

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+   +  + SQ    Q  +  D       W  LG   +V G     G +   + F + +
Sbjct: 82  LEAMPL-RVTSQGLIGQPHSRDDLAATLPAWQQLGIPYMVIGSSQNVGGNA-SITFEVIE 139

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V   + I G +   + A  +  A   S  IY+ ITG+K D N+R+++V E        +S
Sbjct: 140 VAKGRIIKGTQ-TVTAADSKTAARKASSRIYELITGKKLDLNARLIYVEEKGSGKSKTSS 198

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L ++D DG+N R L+   D  ++ P  SP+ + VAY+    ++   ++  D +  +  + 
Sbjct: 199 LVLIDADGSNKRLLSQVIDATIYSPAVSPDGRYVAYSVQLKDNSANLWKYDLKTSQLTRL 258

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + + +   L P FS +G + L S   +   DIY V+      E +    +  ++ SY+P+
Sbjct: 259 V-DMKGSSLRPSFSYDGSKILFSSTVNGDADIYRVNSTGGKPELVMAGPYDQVTPSYAPN 317

Query: 313 SSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            S  V+ SD     +  +Y    +GS   +IS+   A+  +P +SP G  I F       
Sbjct: 318 GS-FVYASDHASPNRPNIYRYNFSGSPV-QISRGGYAT--NPSYSPDGTKIGFLSGRSA- 372

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
               +M  +GS           +AP +SP+G  +++S    G     L    L+G     
Sbjct: 373 ---AIMSNNGSIIANFGATGLDEAPRFSPTGERVVYS---QGAKKGNLVIRYLDGGKVIT 426

Query: 431 INTPAYASDPQWVG 444
           + T   A  P WV 
Sbjct: 427 LPTDGIAKSPTWVP 440


>gi|196019748|ref|XP_002119033.1| hypothetical protein TRIADDRAFT_63003 [Trichoplax adhaerens]
 gi|190577229|gb|EDV18481.1| hypothetical protein TRIADDRAFT_63003 [Trichoplax adhaerens]
          Length = 251

 Score =  240 bits (613), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 102/255 (40%), Positives = 149/255 (58%), Gaps = 7/255 (2%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVYLMDTRIDRAPKRIG 254
           MD+DGAN ++LT   + I   PRF    Q++ + +Y ++    +VY++D         IG
Sbjct: 1   MDQDGANFKFLTSGNEFI-LSPRFDMKSQRITFMSYKNKKNPPKVYVLDLETGEQ-DLIG 58

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDS 313
           +   M  AP FS +    ++S+ K    +IY +DL +   + LTN   FI+ S SYSPD 
Sbjct: 59  DMAGMTFAPNFSPDNNHVVMSLAKKGTTNIYEIDLNTKIKKELTNIYGFIDTSPSYSPDG 118

Query: 314 SQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +I+F SDR G+  Q+YVM  +G + K+IS   E SY  P+WSP G  IAFTK     F 
Sbjct: 119 KKILFNSDRGGRRTQIYVMDRDGQNIKKISS-GEGSYRTPIWSPDGKWIAFTKILLGNFY 177

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           IG+MK DGS ERLL      + P+W+P+ R++IF R+K  D  +K+Y+ID++G NE +I 
Sbjct: 178 IGIMKPDGSDERLLTSSWLEEGPSWAPNSRTIIFGRQKR-DGSNKIYAIDIDGNNERIIY 236

Query: 433 TPAYASDPQWVGFMD 447
           TP   S P W   ++
Sbjct: 237 TPTDGSQPSWSAHLN 251



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 74/169 (43%), Gaps = 5/169 (2%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               ++  +D +    + LT     I   P +SP+ +K+ + +       ++Y+MD R  
Sbjct: 83  KGTTNIYEIDLNTKIKKELTNIYGFIDTSPSYSPDGKKILFNSDRGGRRTQIYVMD-RDG 141

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  K+I +       P +S +GK    +        I  +    +    LT++  +    
Sbjct: 142 QNIKKISSGEGSYRTPIWSPDGKWIAFTKILLGNFYIGIMKPDGSDERLLTSSW-LEEGP 200

Query: 308 SYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           S++P+S  I+F    R+G  ++Y +  +G++++ I    + S   P WS
Sbjct: 201 SWAPNSRTIIFGRQKRDGSNKIYAIDIDGNNERIIYTPTDGS--QPSWS 247



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 69/156 (44%), Gaps = 12/156 (7%)

Query: 162 IYQSITGEKGDFNSRILF------VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           I + +T   G  ++   +      +  +   G  +  + VMDRDG NI+ ++ S +    
Sbjct: 97  IKKELTNIYGFIDTSPSYSPDGKKILFNSDRGGRRTQIYVMDRDGQNIKKIS-SGEGSYR 155

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +SP+ + +A+      +    Y+   + D + +R+     +   P ++ N +  +  
Sbjct: 156 TPIWSPDGKWIAFTKILLGNF---YIGIMKPDGSDERLLTSSWLEEGPSWAPNSRTIIFG 212

Query: 276 VQ-KDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            Q +D +  IY++D+  N  ER+  T       S+S
Sbjct: 213 RQKRDGSNKIYAIDIDGNN-ERIIYTPTDGSQPSWS 247


>gi|299138486|ref|ZP_07031665.1| WD40 domain protein beta Propeller [Acidobacterium sp. MP5ACTX8]
 gi|298599732|gb|EFI55891.1| WD40 domain protein beta Propeller [Acidobacterium sp. MP5ACTX8]
          Length = 445

 Score =  240 bits (612), Expect = 4e-61,   Method: Composition-based stats.
 Identities = 102/456 (22%), Positives = 192/456 (42%), Gaps = 33/456 (7%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAF---VKVATNSANYSPVSIAFTKFVSIDELGGK 64
            + +    N+ L  VL       S+HA        +  A    +++A  K  + D    K
Sbjct: 1   MKSIRAGKNVSLFAVLFASIAVPSMHAQDWFHLETSGGATRIRIAVANFKPQAGDPAAYK 60

Query: 65  --VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVT--GRVIKEG 120
                 +  DL  + +F+++S+D   Q      +      W++  A   +   G V    
Sbjct: 61  HTFDTTLFADLTAAGLFDMVSKDMIPQSTPGTQAEISLAQWSAAPASAAMIAFGNVG-VA 119

Query: 121 KDRLRVEFRLWDVKDRK--QIIGKKF--FSSPASWRKIAHTISDDIYQSITG-EKGDFNS 175
            DRL V   L D K+ +  Q+  K++   +S  S R+IAH  +D+I   + G   G   +
Sbjct: 120 NDRLVVNGFLDDAKNAQYPQVFAKQYNEAASDDSARQIAHRFADEIIARLGGGVSGIAET 179

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           +I +   +         +  MD DGAN   +T     I   PR SP+  +VA+++   +D
Sbjct: 180 KIYYSKRTGTG----KEIWEMDYDGANQHEITH-LGAISISPRVSPDNSRVAFSSLG-KD 233

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             ++ +    + R      +     ++P ++ +G++   S  +    +I+  D +     
Sbjct: 234 GFQIKMYSLLLGRLVN-FTSAGGTNVSPAWAPSGQQLAFSSSRTGDPEIWISDPEGRVAH 292

Query: 296 RLTNTLFINISASYSPD-SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           ++T+ +  ++S +++P    QI + S R    QLY+M ++GS  +R++    A+   P W
Sbjct: 293 KITSFIGPDVSPTWNPKTGGQIAWISGRTHLPQLYIMDADGSGVQRLTDGGYAT--SPSW 350

Query: 355 SPQGDLIAFTKFS------GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFS 407
           SP G  + F               I VM+    +   L  D      P+WSP GR ++F+
Sbjct: 351 SPNGQFLTFAWDRKYGPGAPGGQDIYVMEIASKKWIQLTHDIGPCDFPSWSPDGRHIVFA 410

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
                   +++ S+  +G  +  + T A +  P W 
Sbjct: 411 --NGNGAHTRIMSMLADGTQKQAL-TGAGSDMPNWS 443



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 68/177 (38%), Gaps = 5/177 (2%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +   S +     +I+ +D        +T+   I+IS   SPD+S++ F S  +   Q+ 
Sbjct: 179 TKIYYSKRTGTGKEIWEMDYDGANQHEITHLGAISISPRVSPDNSRVAFSSLGKDGFQIK 238

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +           +     +   P W+P G  +AF+        I +   +G     +   
Sbjct: 239 MYSLLLGRLVNFTSAGGTNV-SPAWAPSGQQLAFSSSRTGDPEIWISDPEGRVAHKITSF 297

Query: 390 -SNLQAPTWSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                +PTW+P +G  + +   +      +LY +D +G     +    YA+ P W  
Sbjct: 298 IGPDVSPTWNPKTGGQIAWISGR--THLPQLYIMDADGSGVQRLTDGGYATSPSWSP 352


>gi|301167924|emb|CBW27509.1| putative periplasmic TolB protein [Bacteriovorax marinus SJ]
          Length = 440

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 100/443 (22%), Positives = 186/443 (41%), Gaps = 30/443 (6%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANY---SPVSIAFTKFVSIDEL-----GGKVSEVVSK 71
           L++L       +  + + +          S V +A                  + +V+  
Sbjct: 4   LIILFLSLLCWNAFSQINIVAVGEAELELSKVEVAKPILQGGVSGSFIADASTIMDVIRN 63

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           D      F +      K+  +  +    +  + + G   ++ G   + G + L+V   + 
Sbjct: 64  DFS----FYMKKFSVKKELSSISEGGFNYSSFKTQGVSYVIRGFFRQSG-NSLQVTLLVH 118

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK- 190
           DV + K +  + +  S  + R  AH  SD  Y+ ITG    FNS+++FVS+   +     
Sbjct: 119 DVANTKVVSEESYTYSGENPRGFAHRFSDTAYKKITGSDSIFNSKMIFVSDRHGNKQTPV 178

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI------LRVYLMDT 244
             L +MD DG N + LT     ++  P  S +  KV Y+   +E        LRVY ++T
Sbjct: 179 KELYMMDFDGGNKKRLTH-HGGVVISPAISHDGTKVLYSLIKNEKSKHRNINLRVYDLET 237

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             +     + +   +     F   G+  L+++      +I+ ++L++ A +RLTN+   +
Sbjct: 238 GRNS---LVSSRNGLNSGAVFMPGGESILLTLSHVGNAEIFIMNLKTKALKRLTNSYSPD 294

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +  S + + S + F S R GK  +Y M       KRIS   + +   P ++P G  IAF+
Sbjct: 295 VDPSINENGSIMTFLSGRAGKPMIYTMDMATRAVKRISFVGKFNAT-PRFAPDGKTIAFS 353

Query: 365 KFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKK---DGDTGSKLYS 420
            +   +F I  +  DGS    L +D  + + PT+S  G+ + FS ++          +Y 
Sbjct: 354 SWLDSRFDIFRIDSDGSNLARLTKDFGSNEDPTYSNDGQFIAFSSQRVLSRTRAVQNIYI 413

Query: 421 IDLNGRNETLINTP-AYASDPQW 442
           +D +G     I       + P+W
Sbjct: 414 MDNDGEIIGAITENFGNCTTPRW 436


>gi|213423404|ref|ZP_03356391.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 267

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 67/273 (24%), Positives = 125/273 (45%), Gaps = 8/273 (2%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +RI +V ++   G     L V D DG N +++     Q L  P +SP+  K+AY T++  
Sbjct: 2   TRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSPDGSKLAYVTFESG 59

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                 ++ T  + A +++ +F     AP FS +G +   ++ K  ++++Y +DL S   
Sbjct: 60  R--SALVIQTLANGAVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQI 117

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            ++T+    N   ++ PDS  + F SD+ G+ Q+Y M  NG   +RI+ +   +  D   
Sbjct: 118 RQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQVYKMNINGGAAQRITWEGSQNQ-DADV 176

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           S  G  +     +  +  I          ++L      + P+ +P+G  +I+S  +    
Sbjct: 177 SSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--M 234

Query: 415 GSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           GS L  +  +GR +  L  T      P W  ++
Sbjct: 235 GSVLNLVSTDGRFKARLPATDGQVKSPAWSPYL 267


>gi|124514218|gb|EAY55733.1| putative TolB protein [Leptospirillum rubarum]
          Length = 447

 Score =  239 bits (611), Expect = 5e-61,   Method: Composition-based stats.
 Identities = 120/458 (26%), Positives = 208/458 (45%), Gaps = 30/458 (6%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGF--FPTSIHAFVKVATNSANYSPVSIAFTKFVSI 58
           M  +  +   LN  + + L+++LIG    FP    A       +       +++      
Sbjct: 1   MQGKRAMRTWLNRVLEIPLIVILIGAALSFPPLARAVNLNVITNQTALFFKLSYVSLGER 60

Query: 59  DELGGKV---SEVVSKDLQRSDVFNLIS-----QDSFKQKITNPDSIPRFQDWNSLGAQV 110
           +    +V   + ++ KDL+ +  F L+      Q S        DS+ +  +    G + 
Sbjct: 61  NLSPSEVRYANALIVKDLEETGYFELVPLSSGDQSSLGNMFLTGDSVRKLAN---SGLEG 117

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           +   ++IK+      V   + D  +   ++ +K+ ++  + R I H   DDI    TG K
Sbjct: 118 VAGAQLIKDDLGTHLVGI-VRDPVNGTVLLSRKYTTT-GNIRVIIHRFVDDIVFQFTGFK 175

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G  ++RI F+ ++   G     L VMD DG  I  LT  R  + + P +S ++  + Y +
Sbjct: 176 GVADARIAFIGKNRRRG---YDLYVMDFDGEGIHRLTWDR-VLAYTPAWSLSRHLIVYTS 231

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE---AMDIYSV 287
           Y   +  ++   D    R    +  F  + + P FS N     +++ K +     +IYS 
Sbjct: 232 YLHSEP-QILSYDLSTGR-RAPLARFPGLNITPNFSRNSAMLAMALSKSQTSQNTEIYSY 289

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D++ +  ERLT +   N+S S+SPD SQIVF SDR+G  Q++VM S+GS++ RIS     
Sbjct: 290 DMKVHRFERLTYSHSNNLSPSWSPDGSQIVFVSDRDGHPQIFVMDSDGSNEHRISFTGFY 349

Query: 348 SYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLI 405
           +   P WSP+GD IA+   +   +  I +    G +   L        +P WSP GR+++
Sbjct: 350 NV-SPSWSPRGDAIAYVCMNERHRPKICLTTPTGDRSLQLTHGSGQDDSPDWSPDGRTIL 408

Query: 406 FSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQW 442
           F+ +  G   S +  + L+G +   L   P     P W
Sbjct: 409 FTHQVKGH--SYIEKMFLDGTHVHRLGAFPHSVITPVW 444



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 5/134 (3%)

Query: 315 QIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +I F   +R     LYVM  +G    R++ D+  +Y  P WS    LI +T +   +  I
Sbjct: 181 RIAFIGKNRRRGYDLYVMDFDGEGIHRLTWDRVLAYT-PAWSLSRHLIVYTSYLHSEPQI 239

Query: 374 GVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFS-RKKDGDTGSKLYSIDLNG-RNETL 430
                   +   L         P +S +   L  +  K      +++YS D+   R E L
Sbjct: 240 LSYDLSTGRRAPLARFPGLNITPNFSRNSAMLAMALSKSQTSQNTEIYSYDMKVHRFERL 299

Query: 431 INTPAYASDPQWVG 444
             + +    P W  
Sbjct: 300 TYSHSNNLSPSWSP 313


>gi|317486270|ref|ZP_07945102.1| tol-Pal system beta propeller repeat protein TolB [Bilophila
           wadsworthia 3_1_6]
 gi|316922440|gb|EFV43694.1| tol-Pal system beta propeller repeat protein TolB [Bilophila
           wadsworthia 3_1_6]
          Length = 440

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 85/427 (19%), Positives = 172/427 (40%), Gaps = 20/427 (4%)

Query: 28  FPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE----LGGKVSEVVSKDLQRSDVFNLIS 83
              S  A +++       + V++A    +S  +    LG ++   +  +L       L  
Sbjct: 21  AAGSSKAAMQIDIYGPGQNIVNLAMAAPLSTGQPAQGLGKELDAAIHDNLSFLPFMRLTD 80

Query: 84  QDSFKQKITNPDSIP---RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
             +     T P   P    F+ +   GA +LVT    +  K    VE R+++    + + 
Sbjct: 81  PKAVLGGTTLPGYQPPNVDFKRFQLAGADLLVTAGWPQGDKSGSTVELRVYETFSGQFVF 140

Query: 141 GKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
           G  +        + +A     D+ +++TG    F + + FV     SG  K  + +    
Sbjct: 141 GNAYSGVTKEEVQDVADRFCADLMKALTGHGDFFLATLAFVKN---SGKNKRDVWITKPT 197

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N+R +T     I   P +S + + + ++  DD+          R+    +RI    + 
Sbjct: 198 GRNLRKITD-IPGIAMSPSWSLDGRFIVFSHMDDKSHALGVW--DRLTNRVQRIRFPGNT 254

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           ++ P F+  G +  +S+   +  DI+ ++        L     IN+S ++    +++ F 
Sbjct: 255 VIGPTFTP-GNKVAVSLSTGKNPDIFMLNHAFQKERTLEANGTINVSPTFDAAGTKMAFT 313

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S+R G  Q+++         R+++    +  +P  SP G LIAF++ + E   I V    
Sbjct: 314 SNRMGGPQIFMKDLASGSVSRVTKQGNYN-TEPSMSPDGTLIAFSRLTSEGNRIFVQDLT 372

Query: 380 GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYA 437
              E+ +     N   P+++P    + F+  + G    ++Y    +G +   + T    A
Sbjct: 373 TGTEQQISFGPGNDVLPSFAPDSYFIAFTSNRSGPN--QIYLTTRHGGDAKKVPTGSGDA 430

Query: 438 SDPQWVG 444
           S P+W  
Sbjct: 431 SFPRWGA 437


>gi|78358671|ref|YP_390120.1| tolB protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
 gi|78221076|gb|ABB40425.1| tolB protein, putative [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 441

 Score =  236 bits (602), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 85/448 (18%), Positives = 183/448 (40%), Gaps = 23/448 (5%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG----- 62
            ++ N+     +LL L+         A V++       +   +A ++ V+          
Sbjct: 1   MKKQNVTFFCAVLLALVLHIARAQA-APVEIDIFGPGQNLTYVAMSEPVTDAGAPLPAMA 59

Query: 63  GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI---PRFQDWNSLGAQVL-VTGRVIK 118
            ++  ++  +L      + +   +     T          F+ +   G  +L VTG    
Sbjct: 60  PELHRLIRHNLGFLPFLDFVDGKTVIGGNTPQAYKAPGIDFRRYLLAGTDLLIVTGWPQT 119

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRI 177
           +     RVE R+++      ++GK ++ +  S    +A     D  + +TG    F S +
Sbjct: 120 QQGQSSRVELRVYETGQGSMLLGKAYYVTSESLLPVVADKFCSDFMKMLTGRGDFFLSTL 179

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            FVS+S      +  +  +   G ++R LT  +  I   P +SP+ + V ++   +    
Sbjct: 180 AFVSQSRNG---QKDIWAVRPTGRDLRQLTAVQ-GIALSPSWSPDGRYVIFSHIGERSHA 235

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                  RI+   + I    + ++ P F  +  R  +S+  +   DI+ ++      + L
Sbjct: 236 LGVW--DRINNRTQLIRFPGNTVIGPTFLPD-NRVAVSLAVNGNPDIFLLNHIFKKQKVL 292

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
             +  I++S S      ++ F S R G   +++   +    +RIS++ + +   P  SP 
Sbjct: 293 EQSWGIDVSPSLDATGKKMAFVSSRLGNPNIFLKDLDSGSVRRISREGKYN-TSPDISPD 351

Query: 358 GDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           G LI +++ +G+   I V     G ++++     N + P+++P    + F+  + G    
Sbjct: 352 GTLIVYSRRTGDGHRIFVHDLVTGREKQITFGPGNDEMPSFAPDSYFIAFASNRSGK--Y 409

Query: 417 KLYSIDLNGRNETLINTPA-YASDPQWV 443
           K+Y    +G    +++T +  AS P W 
Sbjct: 410 KVYLTTRHGGTPKMVDTGSHDASFPAWG 437


>gi|116619651|ref|YP_821807.1| WD40 domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222813|gb|ABJ81522.1| WD40 domain protein beta Propeller [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 464

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 102/476 (21%), Positives = 176/476 (36%), Gaps = 58/476 (12%)

Query: 13  MKINLCLLLVLIGGFFPTSIH-AFVKVATNSANYSPVSIAFTKFVSIDELG---GKVSEV 68
           MK  +C  L   G     +   A + V        PV IA        +     G  +E 
Sbjct: 1   MKKLICFALASAGALLVLAAQDARIVVDRTQG-AIPV-IAIPDLRGSGDAQKFMGAFNET 58

Query: 69  VSKDLQRSDVFNLISQDSFK----QKITNPDSIPRF----------------------QD 102
           +  D+  S +  ++ + S      Q+ ++                             QD
Sbjct: 59  LYNDVNSSGLLKIVPKTSLPLFVPQQPSDFQQPAPPPAPTRGRTPQMTQAASGGGRWMQD 118

Query: 103 WNSL--GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK----QIIGKKFFSS--PASWRKI 154
           W+S    A  L  G           ++  L+D+        Q+IG ++  S   A  RK+
Sbjct: 119 WSSPPPQANYLAFG-YTAVQNGVFVLQGWLYDLSKGNPAAAQVIGNRYLGSVDEAGARKV 177

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH  + +I   + G K  F + I F S           +  MD DG N R +T     I 
Sbjct: 178 AHEFAAEIV-GLFGGKSLFGTHIYFSSNR----SGHKEIWAMDPDGKNQRQITRFNS-IS 231

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P  SP+  K+A+ ++       +++      R  +      S+  A  F+ +GK+ + 
Sbjct: 232 TYPNVSPDGTKIAFTSWVKGQPA-IFIFSVDPVRDLRFYNQTASVNQAGSFTPDGKQIVY 290

Query: 275 SVQKDEAM--DIYSVDLQSNATERLTNTLFINISASYSPD-SSQIVFESDREGKEQLYVM 331
           +      +   I+  +L       +++   I +    +P   + IVF S R G +Q+Y M
Sbjct: 291 ASSAGNGICCRIFIANLDGTGFRPISSPSAIEVEPKVNPKTGADIVFSSGRSGPQQIYRM 350

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLVE 388
             +G+D +R++        +P W P G  IAF    G     F I  M     +   L  
Sbjct: 351 NMDGADVERLTP-GVGEASNPSWHPDGQHIAFAWTQGYATGAFNIFTMNVATREYVQLTH 409

Query: 389 -DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            D   + P W+P G  ++F++ +     S++Y++  NG     + T      P W 
Sbjct: 410 GDGKNENPNWAPDGVHIVFAKTRGNS--SQIYTMLANGTQIQQLTTAGQNERPVWG 463



 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 77/181 (42%), Gaps = 7/181 (3%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G     S  +    +I+++D       ++T    I+   + SPD ++I F S  +G+  +
Sbjct: 196 GTHIYFSSNRSGHKEIWAMDPDGKNQRQITRFNSISTYPNVSPDGTKIAFTSWVKGQPAI 255

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLL 386
           ++   +     R      +      ++P G  I +   +G      I +   DG+  R +
Sbjct: 256 FIFSVDPVRDLRFYNQTASVNQAGSFTPDGKQIVYASSAGNGICCRIFIANLDGTGFRPI 315

Query: 387 VEDSNLQ-APTWSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWV 443
              S ++  P  +P +G  ++FS  + G    ++Y ++++G + E L      AS+P W 
Sbjct: 316 SSPSAIEVEPKVNPKTGADIVFSSGRSGPQ--QIYRMNMDGADVERLTPGVGEASNPSWH 373

Query: 444 G 444
            
Sbjct: 374 P 374


>gi|256828400|ref|YP_003157128.1| WD40 domain-containing protein beta Propeller [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577576|gb|ACU88712.1| WD40 domain protein beta Propeller [Desulfomicrobium baculatum DSM
           4028]
          Length = 439

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 91/426 (21%), Positives = 164/426 (38%), Gaps = 29/426 (6%)

Query: 35  FVKVATNSANYSPVSIAFTKFVS----------IDELGGKVSEVVSKDLQRSDVFNLISQ 84
            + +       S V++   + +S                ++ + +  +      FN++S 
Sbjct: 24  VLNIDIYGPGQSRVNLFVAEALSKDGSGPVGAIPGNAPSELQQRIHANCAFLPFFNMLSG 83

Query: 85  DSFKQKITNPDSI---PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
                       +     F  +      VLVT            VE R ++V   + I+G
Sbjct: 84  KDIVGGPNPGGYVAQSIDFNKFQLARTDVLVTAAWAPRPGGVGEVELRAYEVYTGRLIVG 143

Query: 142 KKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           K +  ++     ++A     D+ +++TG+   F S I FV +       +  + +    G
Sbjct: 144 KGYGVANNQQIPEVAARFCADLMEALTGQGDFFRSNIAFVKKEG----QRKQVYMATAQG 199

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSM 259
            N++ +T   D I   P +S + QK+ +   D +   L V+   TR     +  GN    
Sbjct: 200 LNLQKITN-LDGIAVSPAWSHDGQKLVFVFLDKKYHNLCVWDRQTRTLDKKRLPGN---T 255

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           ++AP F+  G    IS+      DIY ++ +      L     I+I   +     ++VF 
Sbjct: 256 LIAPAFTKTGN-VAISLDMRGNPDIYELNSEYKVVRPLEENWGIDIGPDFDRSGEKMVFV 314

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S+R G   +++        KRIS   + +   P  SP G  + F +       + ++   
Sbjct: 315 SNRLGNPHVFLKNMVTGQSKRISLTGKYN-TGPSISPDGSQVVFAQMVNGNHKLFLVDLA 373

Query: 380 GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYA 437
              ER L     + + PTWSP G  + F+  + G   SK+Y    +G    LI T P  A
Sbjct: 374 SGHERQLTFGPGSDEDPTWSPDGYFIAFASNRSGP--SKIYLTTKHGDEPILIPTGPGEA 431

Query: 438 SDPQWV 443
           + P W 
Sbjct: 432 TSPAWG 437


>gi|145640336|ref|ZP_01795920.1| translocation protein TolB precursor [Haemophilus influenzae R3021]
 gi|145274922|gb|EDK14784.1| translocation protein TolB precursor [Haemophilus influenzae
           22.4-21]
          Length = 292

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 63/291 (21%), Positives = 129/291 (44%), Gaps = 14/291 (4%)

Query: 3   LRFFIAEELNMKINLCLLLVLIGGFFP-TSIHAFVKVATNSANYSPVSIAFTKFVSIDEL 61
           +  F   ++ +   L  +  +I            V++  +        IA   FV     
Sbjct: 1   MLNFKGNKMKLLKRLVSVFAIILAITHNVFAGDEVRIVIDEGVDGARPIAVVPFVG--SA 58

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
              +S++V+ DL+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G 
Sbjct: 59  PEDISKIVADDLRNSGKFNPIAVSQMPQHPTSAAEV-NPEAWSNIGIDAIVIGQVVPSGN 117

Query: 122 DRLRVEFRLWDVKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
               + ++L D           ++   +  +    R  AHT+SD++++ ++G +G F +R
Sbjct: 118 G-YSITYQLIDTVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLSGIRGAFRTR 176

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I +V +    G     + V D DG N +++     Q +  P +SP+ Q++AY +++++  
Sbjct: 177 IAYVVQKN-GGSQPYEVRVADYDGYN-QFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKS 234

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             V  +        K + +F+    AP FS +G R   +  +D  ++IY +
Sbjct: 235 QLV--VQDLNSGTRKVVASFQGHNGAPAFSPDGSRLAFASSRDGVLNIYVM 283



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 314 SQIVFESDREGKEQLY---VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           ++I +   + G  Q Y   V   +G +Q  I          P WSP G  +A+  F  +K
Sbjct: 175 TRIAYVVQKNGGSQPYEVRVADYDGYNQF-IVNRSAQPIMSPAWSPDGQRLAYVSFENKK 233

Query: 371 FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             + V   +    +++     +  AP +SP G  L F+  +DG     +Y +
Sbjct: 234 SQLVVQDLNSGTRKVVASFQGHNGAPAFSPDGSRLAFASSRDG--VLNIYVM 283



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 12/150 (8%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY---S 286
           +Y   +    Y   T  D   +++   R       F     R    VQK+     Y    
Sbjct: 143 SYTVTNKWLRYGAHTVSDEVFEKLSGIRG-----AFR---TRIAYVVQKNGGSQPYEVRV 194

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D        +  +    +S ++SPD  ++ + S    K QL V   N   +K ++  + 
Sbjct: 195 ADYDGYNQFIVNRSAQPIMSPAWSPDGQRLAYVSFENKKSQLVVQDLNSGTRKVVASFQG 254

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            +   P +SP G  +AF         I VM
Sbjct: 255 HN-GAPAFSPDGSRLAFASSRDGVLNIYVM 283



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 40/98 (40%), Gaps = 13/98 (13%)

Query: 359 DLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDT 414
             IA+          + + V   DG  + ++   +  + +P WSP G+ L +   ++   
Sbjct: 175 TRIAYVVQKNGGSQPYEVRVADYDGYNQFIVNRSAQPIMSPAWSPDGQRLAYVSFENKK- 233

Query: 415 GSKLYSIDLNGRNETLINT-------PAYASDPQWVGF 445
            S+L   DLN     ++ +       PA++ D   + F
Sbjct: 234 -SQLVVQDLNSGTRKVVASFQGHNGAPAFSPDGSRLAF 270


>gi|190149576|ref|YP_001968101.1| protein tolB precursor [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|189914707|gb|ACE60959.1| Protein tolB precursor [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
          Length = 311

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 80/286 (27%), Positives = 126/286 (44%), Gaps = 12/286 (4%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK--Q 138
            + +     +  +   +   Q W  +G   +V G+V   G     V ++L D        
Sbjct: 13  PVERSKLPAQPGSAAEV-NSQQWTDIGVDSVVVGQVTPTGGG-YNVAYQLVDTLSNPATV 70

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           +    F    A  R+ AHT+SD +++ IT  +G F ++I +V +  VS      L V D 
Sbjct: 71  LAQGAFNVPAAQIRQGAHTVSDQVFEKITQIRGAFRTKIAYVVQRGVS---SYELRVSDY 127

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG N   +  S++  L  P +SP+  ++AY T++++   +V + D R     + +   R 
Sbjct: 128 DGYNAFTVVKSKEP-LMSPEWSPDGSRLAYVTFENKKA-QVVVHDLRSGS-RRVVAALRG 184

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
              AP FS +G R   +  +D  +DIY V        +LT     N   S+SPD S I F
Sbjct: 185 HNGAPAFSPDGSRIAFASNQDGELDIYVVGANGGKPSKLTANAGNNTEPSWSPDGSTIYF 244

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            SDR G  Q+Y M S+G     +      SY   V S   +LI   
Sbjct: 245 TSDRAGSPQVYRMGSSGGGASPM--GGSGSYNAKVSSDGKNLIMIA 288



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 69/168 (41%), Gaps = 5/168 (2%)

Query: 270 KRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +    VQ+   + ++   D        +  +    +S  +SPD S++ + +    K Q+
Sbjct: 107 TKIAYVVQRGVSSYELRVSDYDGYNAFTVVKSKEPLMSPEWSPDGSRLAYVTFENKKAQV 166

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V       ++ ++  +  +   P +SP G  IAF      +  I V+  +G +   L  
Sbjct: 167 VVHDLRSGSRRVVAALRGHN-GAPAFSPDGSRIAFASNQDGELDIYVVGANGGKPSKLTA 225

Query: 389 D-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +  N   P+WSP G ++ F+  + G    ++Y +  +G   + +    
Sbjct: 226 NAGNNTEPSWSPDGSTIYFTSDRAGS--PQVYRMGSSGGGASPMGGSG 271



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 314 SQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           ++I +   R     +L V   +G +   + + KE     P WSP G  +A+  F  +K  
Sbjct: 107 TKIAYVVQRGVSSYELRVSDYDGYNAFTVVKSKE-PLMSPEWSPDGSRLAYVTFENKKAQ 165

Query: 373 IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETL 430
           + V        R++     +  AP +SP G  + F+  +DG+    +Y +  NG +   L
Sbjct: 166 VVVHDLRSGSRRVVAALRGHNGAPAFSPDGSRIAFASNQDGE--LDIYVVGANGGKPSKL 223

Query: 431 INTPAYASDPQWVG 444
                  ++P W  
Sbjct: 224 TANAGNNTEPSWSP 237


>gi|298529978|ref|ZP_07017380.1| WD40 domain protein beta Propeller [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298509352|gb|EFI33256.1| WD40 domain protein beta Propeller [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 444

 Score =  234 bits (597), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 86/450 (19%), Positives = 181/450 (40%), Gaps = 29/450 (6%)

Query: 11  LNMKINLCLL-LVLIGGFFPTSIHAF--VKVATNSANYSPVS--IAFTKFVSID-----E 60
           + ++  + L  + L+    PT   A   + +         ++  +A  + +  +     E
Sbjct: 2   IKLRFFIFLSAIFLVVSLLPTRAWAQDSLHIDIFGPGEDRINAFVAPPRDLQSEVLHNPE 61

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI---PRFQDWNSLGAQVLVTGRVI 117
           LG ++ + +  +L        ++ +                 F+ +N     +L+T  + 
Sbjct: 62  LGSRIYDGLQSNLGLLPFLTQVNPEHILGGPGVEGVRGRDIDFRKFNLSRVDLLLTIGLE 121

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
           +       VE R ++V D++ I+G+ +          +      ++ + +TG    F SR
Sbjct: 122 QHAGGPGSVEIRAFEVFDQRMILGRAYDLQDLDQVPLMLRRFCAELMEYLTGNGDFFRSR 181

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           + F             +  +   G ++  LT  R  I   P +SP+  ++A+    D   
Sbjct: 182 LAF----ERKKNGNKDIWSVTPQGNDLTRLTDLR-GITLSPAWSPDGSRIAFTLMRDN-- 234

Query: 237 LRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +L    +++  + + +     +++P FS  G R  +S+      DIY +D      E
Sbjct: 235 -EHHLGIWDLEKGEEEVFSMPGNTVISPAFSPEG-RLALSLDPMGRPDIYWLDDDYGVDE 292

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            +     I++S S+    +++ F S R G   ++V        +R+S +   +  +P  S
Sbjct: 293 TIMEHWAIDVSPSFDASGTKMAFASGRLGNPHIFVHDFEKGQIQRVSYEGRYN-TNPSIS 351

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDT 414
           P+GD +AFT+ + +   I V+  +  +E+ +     N + P ++P G  + FS  + G+ 
Sbjct: 352 PEGDFVAFTRQTPDGHRIFVVDLETGREKQISSGPGNDEDPAFAPDGYFVAFSSNRSGE- 410

Query: 415 GSKLYSIDLNGRNETLINTP-AYASDPQWV 443
             +LY    NG     I+T    A  P W 
Sbjct: 411 -YRLYLTTRNGDEPREISTGEGNAKAPAWG 439


>gi|46581506|ref|YP_012314.1| tolB protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|46450928|gb|AAS97574.1| tolB protein, putative [Desulfovibrio vulgaris str. Hildenborough]
          Length = 456

 Score =  232 bits (593), Expect = 7e-59,   Method: Composition-based stats.
 Identities = 88/442 (19%), Positives = 174/442 (39%), Gaps = 26/442 (5%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPV------SIAFTKFVSIDELGGKVSEVV 69
               L ++      T+    V+V         +       +  T    +  +G K++  +
Sbjct: 23  LFAGLALVFCLAVGTAAAGPVQVDIYGPGQGSLNLAMAAPLGPTPGTPVSGMGVKLNGFI 82

Query: 70  SKDLQRSDVFNLISQDSFK-----QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +++L       L+ Q +       Q   +PD     + +   GA ++VT    +      
Sbjct: 83  NENLSFLPFLRLVDQRAILGGTVMQGYKSPD--IDLKRFQLAGADLVVTAGWPQGDASGS 140

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            VE R+++    K + GK +          +A     D+ +++TG    F S + FV   
Sbjct: 141 FVELRVYEALSGKLVFGKAYSHVEDGLLPNVADRFCSDLMKALTGRGEFFKSTLAFVKH- 199

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              G  K  + ++   G ++R +T         P +SP+ + V ++ +DD          
Sbjct: 200 --DGKNKRDVWLVKPVGRDLRKITN-LPGEALSPSWSPDGRFVVFSHFDDRSHALGVW-- 254

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R+ R  +RI    + ++ P F  +  +  +S+      DI+ ++        L     I
Sbjct: 255 DRLTRQVQRIRFPGNTVIGPCFLPD-NKVAVSLSSGRNPDIFLLNHLFKKERELEANPSI 313

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N+S S+    +++ F S R G  Q+++         RIS+    +  +P  SP G L+AF
Sbjct: 314 NVSPSFDATGTKMAFTSSRMGGPQVFMKDMTTGQVTRISKTGSYN-TEPSISPDGTLVAF 372

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           TK +     I V       ER +       + P+++P    L F+  ++G    +++ + 
Sbjct: 373 TKMTDTGHRIFVYDMVTQSERQVSFGPGRDEQPSFAPDSYFLAFTSNRNG--AQQIFLVT 430

Query: 423 LNGRNETLINT-PAYASDPQWV 443
            +G +   + T P  AS  +W 
Sbjct: 431 RHGGDPKRVPTGPGDASFARWG 452


>gi|120601328|ref|YP_965728.1| WD40 domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|120561557|gb|ABM27301.1| WD40 domain protein beta Propeller [Desulfovibrio vulgaris DP4]
          Length = 463

 Score =  232 bits (592), Expect = 8e-59,   Method: Composition-based stats.
 Identities = 88/442 (19%), Positives = 174/442 (39%), Gaps = 26/442 (5%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPV------SIAFTKFVSIDELGGKVSEVV 69
               L ++      T+    V+V         +       +  T    +  +G K++  +
Sbjct: 30  LFAGLALVFCLAVGTAAAGPVQVDIYGPGQGSLNLAMAAPLGPTPGTPVSGMGVKLNGFI 89

Query: 70  SKDLQRSDVFNLISQDSFK-----QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +++L       L+ Q +       Q   +PD     + +   GA ++VT    +      
Sbjct: 90  NENLSFLPFLRLVDQRAILGGTVMQGYKSPD--IDLKRFQLAGADLVVTAGWPQGDASGS 147

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            VE R+++    K + GK +          +A     D+ +++TG    F S + FV   
Sbjct: 148 FVELRVYEALSGKLVFGKAYSHVEDGLLPNVADRFCSDLMKALTGRGEFFKSTLAFVKH- 206

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              G  K  + ++   G ++R +T         P +SP+ + V ++ +DD          
Sbjct: 207 --DGKNKRDVWLVKPVGRDLRKITN-LPGEALSPSWSPDGRFVVFSHFDDRSHALGVW-- 261

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R+ R  +RI    + ++ P F  +  +  +S+      DI+ ++        L     I
Sbjct: 262 DRLTRQVQRIRFPGNTVIGPCFLPD-NKVAVSLSSGRNPDIFLLNHLFKKERELEANPSI 320

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N+S S+    +++ F S R G  Q+++         RIS+    +  +P  SP G L+AF
Sbjct: 321 NVSPSFDATGTKMAFTSSRMGGPQVFMKDMTTGQVTRISKTGSYN-TEPSISPDGTLVAF 379

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           TK +     I V       ER +       + P+++P    L F+  ++G    +++ + 
Sbjct: 380 TKMTDTGHRIFVYDMVTQSERQVSFGPGRDEQPSFAPDSYFLAFTSNRNG--AQQIFLVT 437

Query: 423 LNGRNETLINT-PAYASDPQWV 443
            +G +   + T P  AS  +W 
Sbjct: 438 RHGGDPKRVPTGPGDASFARWG 459


>gi|118574578|sp|Q726K4|TOLB_DESVH RecName: Full=Protein tolB; Flags: Precursor
          Length = 442

 Score =  232 bits (592), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 88/442 (19%), Positives = 174/442 (39%), Gaps = 26/442 (5%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPV------SIAFTKFVSIDELGGKVSEVV 69
               L ++      T+    V+V         +       +  T    +  +G K++  +
Sbjct: 9   LFAGLALVFCLAVGTAAAGPVQVDIYGPGQGSLNLAMAAPLGPTPGTPVSGMGVKLNGFI 68

Query: 70  SKDLQRSDVFNLISQDSFK-----QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +++L       L+ Q +       Q   +PD     + +   GA ++VT    +      
Sbjct: 69  NENLSFLPFLRLVDQRAILGGTVMQGYKSPD--IDLKRFQLAGADLVVTAGWPQGDASGS 126

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            VE R+++    K + GK +          +A     D+ +++TG    F S + FV   
Sbjct: 127 FVELRVYEALSGKLVFGKAYSHVEDGLLPNVADRFCSDLMKALTGRGEFFKSTLAFVKH- 185

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              G  K  + ++   G ++R +T         P +SP+ + V ++ +DD          
Sbjct: 186 --DGKNKRDVWLVKPVGRDLRKITN-LPGEALSPSWSPDGRFVVFSHFDDRSHALGVW-- 240

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R+ R  +RI    + ++ P F  +  +  +S+      DI+ ++        L     I
Sbjct: 241 DRLTRQVQRIRFPGNTVIGPCFLPD-NKVAVSLSSGRNPDIFLLNHLFKKERELEANPSI 299

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N+S S+    +++ F S R G  Q+++         RIS+    +  +P  SP G L+AF
Sbjct: 300 NVSPSFDATGTKMAFTSSRMGGPQVFMKDMTTGQVTRISKTGSYN-TEPSISPDGTLVAF 358

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           TK +     I V       ER +       + P+++P    L F+  ++G    +++ + 
Sbjct: 359 TKMTDTGHRIFVYDMVTQSERQVSFGPGRDEQPSFAPDSYFLAFTSNRNG--AQQIFLVT 416

Query: 423 LNGRNETLINT-PAYASDPQWV 443
            +G +   + T P  AS  +W 
Sbjct: 417 RHGGDPKRVPTGPGDASFARWG 438


>gi|311235155|gb|ADP88009.1| Tol-Pal system beta propeller repeat protein TolB [Desulfovibrio
           vulgaris RCH1]
          Length = 445

 Score =  232 bits (592), Expect = 9e-59,   Method: Composition-based stats.
 Identities = 88/442 (19%), Positives = 174/442 (39%), Gaps = 26/442 (5%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPV------SIAFTKFVSIDELGGKVSEVV 69
               L ++      T+    V+V         +       +  T    +  +G K++  +
Sbjct: 12  LFAGLALVFCLAVGTAAAGPVQVDIYGPGQGSLNLAMAAPLGPTPGTPVSGMGVKLNGFI 71

Query: 70  SKDLQRSDVFNLISQDSFK-----QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +++L       L+ Q +       Q   +PD     + +   GA ++VT    +      
Sbjct: 72  NENLSFLPFLRLVDQRAILGGTVMQGYKSPD--IDLKRFQLAGADLVVTAGWPQGDASGS 129

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            VE R+++    K + GK +          +A     D+ +++TG    F S + FV   
Sbjct: 130 FVELRVYEALSGKLVFGKAYSHVEDGLLPNVADRFCSDLMKALTGRGEFFKSTLAFVKH- 188

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              G  K  + ++   G ++R +T         P +SP+ + V ++ +DD          
Sbjct: 189 --DGKNKRDVWLVKPVGRDLRKITN-LPGEALSPSWSPDGRFVVFSHFDDRSHALGVW-- 243

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R+ R  +RI    + ++ P F  +  +  +S+      DI+ ++        L     I
Sbjct: 244 DRLTRQVQRIRFPGNTVIGPCFLPD-NKVAVSLSSGRNPDIFLLNHLFKKERELEANPSI 302

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N+S S+    +++ F S R G  Q+++         RIS+    +  +P  SP G L+AF
Sbjct: 303 NVSPSFDATGTKMAFTSSRMGGPQVFMKDMTTGQVTRISKTGSYN-TEPSISPDGTLVAF 361

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           TK +     I V       ER +       + P+++P    L F+  ++G    +++ + 
Sbjct: 362 TKMTDTGHRIFVYDMVTQSERQVSFGPGRDEQPSFAPDSYFLAFTSNRNG--AQQIFLVT 419

Query: 423 LNGRNETLINT-PAYASDPQWV 443
            +G +   + T P  AS  +W 
Sbjct: 420 RHGGDPKRVPTGPGDASFARWG 441


>gi|196233271|ref|ZP_03132117.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
 gi|196222742|gb|EDY17266.1| OmpA/MotB domain protein [Chthoniobacter flavus Ellin428]
          Length = 564

 Score =  231 bits (588), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 100/426 (23%), Positives = 157/426 (36%), Gaps = 52/426 (12%)

Query: 13  MKINLCLLLVLIGGFFPTS-IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           MK      +V        S            +    + IA       D      ++++  
Sbjct: 1   MKKLHAFSVVASCLLLSFSLARGAETPTITISKSDKIPIAIGSIAGADGGPA--AKILQN 58

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL  S  FNL+   S    +    +                 G V               
Sbjct: 59  DLAMSGYFNLVPSASAGFIVGGTSNGNSLA------------GSVTDR------------ 94

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
                K ++ K F  S    R   H  +D+I +++TG KG  +S++ FV     +     
Sbjct: 95  ---SGKTVLMKTFSGSA---RGKVHAYADEIVETLTGNKGIASSKVAFV----GTHTGHK 144

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + + D DG+N+R LT   + I   PR SP+   + Y  Y       VY +D     A  
Sbjct: 145 EIYLADADGSNVRQLTNDAN-ISVGPRLSPDGSHLVYTGYKSG-YADVYEIDLGSG-ARN 201

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           RI  F        +S NG+   + + KD   ++Y+         RLT+T  +  S ++SP
Sbjct: 202 RIIKFPGTNTGAAYSPNGRELAVILSKDGNPELYTTSAGGGGAHRLTHTPGVESSPTWSP 261

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              +I++ SD  G  QLY + S G   + IS     +  +P WSP G  +AFT   G  F
Sbjct: 262 SGDEIIYSSDDRGGPQLYRISSGGGSGRLISTGHGYN-TEPNWSPDGKKVAFTVRDGG-F 319

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
            I V+         +    + + P W    R LIF+       G  L  +D   G+  TL
Sbjct: 320 TIAVLDLGSGNVHTV---GSGEGPAWGADSRHLIFAE------GGSLILLDAQTGQKTTL 370

Query: 431 INTPAY 436
           ++    
Sbjct: 371 VSGLGQ 376



 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 60/134 (44%), Gaps = 5/134 (3%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           SS++ F     G +++Y+  ++GS+ ++++ D   S   P  SP G  + +T +      
Sbjct: 131 SSKVAFVGTHTGHKEIYLADADGSNVRQLTNDANISV-GPRLSPDGSHLVYTGYKSGYAD 189

Query: 373 IGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETL 430
           +  +    G++ R++          +SP+GR L     KDG    +LY+    G     L
Sbjct: 190 VYEIDLGSGARNRIIKFPGTNTGAAYSPNGRELAVILSKDG--NPELYTTSAGGGGAHRL 247

Query: 431 INTPAYASDPQWVG 444
            +TP   S P W  
Sbjct: 248 THTPGVESSPTWSP 261


>gi|212704938|ref|ZP_03313066.1| hypothetical protein DESPIG_03005 [Desulfovibrio piger ATCC 29098]
 gi|212671602|gb|EEB32085.1| hypothetical protein DESPIG_03005 [Desulfovibrio piger ATCC 29098]
          Length = 437

 Score =  231 bits (588), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 79/442 (17%), Positives = 180/442 (40%), Gaps = 21/442 (4%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFT-----KFVSIDELGGKVSE 67
           MK    LL + +     ++  A ++V       + V++A            + +G K+ +
Sbjct: 1   MKRLAILLALAVTLSLGSTAQAAMRVDIYGPGQNIVNLALAAPITGPQKQANGMGAKLQK 60

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIP---RFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +V ++L       L    S    I  P   P    F+ +   G+ ++VT           
Sbjct: 61  LVEENLSFLPFMRLTPAASVLGGILLPGYEPPNLDFKRFQLAGSDIVVTTYWPNGDSGTS 120

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPA-SWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            V+ R ++     ++ GK++    A    ++A     D+ + +TG    F S + FV + 
Sbjct: 121 SVQIRAFETNTGGRLFGKEYPQVRAGDLPEVADRFCADLLEVLTGSGAFFRSTLAFVKK- 179

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             SG +  ++ ++   G ++R +T  + +    P +SP+ + + +   D++         
Sbjct: 180 --SGRLSANVWLVKPTGRDLRQITNIKGE-AMSPAWSPDGRFIVFTHIDEKSHSLGVW-- 234

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R   + +R+    ++++ P F+ +  +  +++       I+ ++        L     I
Sbjct: 235 DRKKGSVQRVRFPGNVVIGPSFTPD-NKVAVALSNGRYPVIFLLNHGFQKERILEGGNSI 293

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N+S ++    +++VF S R G  Q+++   +     R+S++   +  +   SP G L+ +
Sbjct: 294 NVSPTFDRTGTKMVFTSSRLGGPQIFMKDLSSGSITRVSKNGGYN-TEANLSPDGTLVTY 352

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           ++ +     I V       ER +     + + P++      + F+  + G  G  +Y   
Sbjct: 353 SRMTEYGHRIFVQDMVTGLERQITFGPGSDEQPSFCGDSYFIAFASSRGGSRG--IYLTT 410

Query: 423 LNGRNETLINTPAY-ASDPQWV 443
            +G +   + T    AS P+W 
Sbjct: 411 RHGGDAKKVPTGGGAASFPRWG 432



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 54/160 (33%), Gaps = 2/160 (1%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G     +    + I   P F     K+ + +       ++++ D        R+      
Sbjct: 280 GFQKERILEGGNSINVSPTFDRTGTKMVFTSSRLGGP-QIFMKDLSSGSIT-RVSKNGGY 337

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                 S +G     S   +    I+  D+ +    ++T     +   S+  DS  I F 
Sbjct: 338 NTEANLSPDGTLVTYSRMTEYGHRIFVQDMVTGLERQITFGPGSDEQPSFCGDSYFIAFA 397

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S R G   +Y+   +G D K++     A+ F     P G 
Sbjct: 398 SSRGGSRGIYLTTRHGGDAKKVPTGGGAASFPRWGMPDGK 437


>gi|218887448|ref|YP_002436769.1| Tol-Pal system beta propeller repeat protein TolB [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218758402|gb|ACL09301.1| Tol-Pal system beta propeller repeat protein TolB [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 446

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 82/447 (18%), Positives = 167/447 (37%), Gaps = 23/447 (5%)

Query: 10  ELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPV------SIAFTKFVSIDELGG 63
            ++  +    L+       P      V++         +       +  T    +   G 
Sbjct: 6   AIHRLMAAVCLIACCALAAPALAVGPVQIDIYGPGQGSLNLALADPLGPTPGTPVTGQGV 65

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI---PRFQDWNSLGAQVLVTGRVIK-E 119
           K++E++ ++L       L    +                F+ +   G  ++VT    + +
Sbjct: 66  KLNEIIRENLSFLPFLRLTDPKAILGGSVLQSYKAPDIDFKRFQIAGTDLVVTAGWPQGD 125

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFF-SSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
              +  VE R+++    K + GK ++         +A     D+ +++TG    F S + 
Sbjct: 126 APGKPFVELRVYEAYSGKLVFGKGYYDIQETQLPDVADRFCSDLMKALTGRGEFFKSTLA 185

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           FV      G  K  + +    G ++R +T         P +SP+ + + ++  DD     
Sbjct: 186 FVK---SGGKNKKDVWLSKPTGRDLRQITN-LPGEAMSPSWSPDARFIVFSHMDDRTHAL 241

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
                 R+ R  +RI    + ++ P F  +  +  +S+   +   I+ +         L 
Sbjct: 242 GVW--DRLTRQTQRIKFPGNTVIGPTFMPD-NKVAVSLSTGKNPGIFLLSHVFQKERALE 298

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           ++  I++S S+    +++ F S R G  Q+++         RIS+    +   P  SP G
Sbjct: 299 DSASIDVSPSFDATGTKMAFCSSRLGGPQIFLKDLTTGQVTRISRSGNYN-TAPSISPDG 357

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            LIAF + +     I V       ER +       + P+++P    L F+  + G    +
Sbjct: 358 TLIAFARMTDFGHRIFVYDMVTQSERQVTFGPGTDETPSFAPDSYFLAFTSTRSG--AKQ 415

Query: 418 LYSIDLNGRNETLINTP-AYASDPQWV 443
           +Y I  +G +   + T    AS P W 
Sbjct: 416 IYLITRHGGDAKRVPTGAGDASFPDWG 442


>gi|94987134|ref|YP_595067.1| periplasmic component of the Tol biopolymer transport system
           [Lawsonia intracellularis PHE/MN1-00]
 gi|94731383|emb|CAJ54746.1| Periplasmic component of the Tol biopolymer transport system
           [Lawsonia intracellularis PHE/MN1-00]
          Length = 452

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 83/424 (19%), Positives = 168/424 (39%), Gaps = 20/424 (4%)

Query: 31  SIHAFVKVATNSANYSPVSIA-----FTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQD 85
              + +++       + V +A      +  V   +LG  +   +  +L       L  + 
Sbjct: 29  PALSAMQIDIYGPGQNIVHVAMARPIISPGVLATDLGIDLDRAIRNNLSYLPFMRLTDEK 88

Query: 86  SFKQKITNPDSIP---RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
           +     +     P    F+ +   G+ +L+T    K       VE RL++    K + G 
Sbjct: 89  AILNGSSLEGYQPPNIDFKRFQLAGSDLLITVGWPKGDHSDSSVELRLYETYSGKFVFGT 148

Query: 143 KFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
            +     S    IA     D+ +++TG    F S + FV +   +G     + ++   G 
Sbjct: 149 AYSGVVKSEISNIADKFCADLMKTLTGSGDFFLSTLAFVKQ--GNGKNVRDVWLVKPTGK 206

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
            +R +T         P +S + + + +   DD           R+    +RI    + ++
Sbjct: 207 ELRQITD-ISGTAMSPSWSIDGRFIVFTHLDDRSHALGVW--DRLTNKIQRIRFPGNTVI 263

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            P F  +  +  +S+   +  DI+ +D      + L  +  IN+S S+    +++ F S+
Sbjct: 264 GPVFMPD-NKVAVSLSTGKYPDIFLLDHTFQKEKVLEESPAINVSPSFDAKGTKMAFCSN 322

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R    Q+++   +     R+S+    +  +P  SP G LIAF++ + +   I V      
Sbjct: 323 RLSNPQIFMKDFSSGQVSRVSRQGCYN-TEPTMSPDGTLIAFSRLTDDGNRIFVQDLLTG 381

Query: 382 QERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASD 439
            ER +     N + P+++P    + F+  + G    ++Y I  +G +   I T    AS 
Sbjct: 382 IERQVTFGPGNDEQPSFAPDSYFIAFTSTRSGKK--QIYLITRHGGDAKQIPTGHGDASF 439

Query: 440 PQWV 443
           P+W 
Sbjct: 440 PRWG 443


>gi|226227348|ref|YP_002761454.1| hypothetical protein GAU_1942 [Gemmatimonas aurantiaca T-27]
 gi|226090539|dbj|BAH38984.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 420

 Score =  229 bits (583), Expect = 9e-58,   Method: Composition-based stats.
 Identities = 87/408 (21%), Positives = 163/408 (39%), Gaps = 40/408 (9%)

Query: 48  VSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLG 107
           + IA          G  ++ +VS+DL  SD F ++S  S        +    +  +  LG
Sbjct: 41  LPIA-------GANGDSIARMVSRDLDFSDRFTIVSSSSAPA----VNGAINYALFTKLG 89

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP----ASWRKIAHTISDDIY 163
              +V   ++  G     V   L DV  +     + F        A+WR   H +SD + 
Sbjct: 90  VDGIVQATLLPSGW----VRVALHDVGLKNVKNSRDFPLPTPALSATWRLAVHGVSDGVE 145

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           + ITG +G   +R+ F             +  +D DGAN+  +TPS       P++ P+ 
Sbjct: 146 EWITGARGIAQTRVAF--------TRGGRVWTIDSDGANVTAVTPSG----MSPQWLPSG 193

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQKDEAM 282
           + + Y+  D   +    ++      A + + + + +    P  S +G+  + +   D   
Sbjct: 194 RGIVYSVLD--GVRNPIMLTDLSTGAQRVLASAQGVEHTTPIVSPDGRTVVYARGSDTGT 251

Query: 283 DIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           D+Y   +      R+T      +  AS+SPD  ++ F SDR G  ++Y+   +G++ + +
Sbjct: 252 DLYQQSMDGGTPRRITVGRGRASAQASFSPDGQRLAFMSDRSGHPEVYISDLDGTNTELL 311

Query: 342 S---QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           +            P WSP G L+AF   +G  F I  +       + +  D     P+W+
Sbjct: 312 TAAAFGDRDYRAGPDWSPDGRLVAFQSRNGGTFQIMTINLRDQSVKQVTNDGRNDDPSWA 371

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           P  R ++F+  + G    +L+ +D        +          W   +
Sbjct: 372 PDSRHVVFTSTRSGTR--QLWIVDTETGRTRQLTFGPETRLSAWSPRL 417


>gi|118588325|ref|ZP_01545734.1| translocation protein TolB precursor [Stappia aggregata IAM 12614]
 gi|118439031|gb|EAV45663.1| translocation protein TolB precursor [Stappia aggregata IAM 12614]
          Length = 189

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 93/190 (48%), Positives = 125/190 (65%), Gaps = 2/190 (1%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           M  APRFS +G+  ++S+Q+    +I+ +DL+S  T RLTN   I+ S S+SPD SQIVF
Sbjct: 1   MTFAPRFSPDGQSVVMSLQQGGNANIFKMDLRSRQTTRLTNDAAIDTSPSFSPDGSQIVF 60

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           ESDR G +QLYVM + G   +RIS      Y  PVWSP+GDLIAFTK    +F IGVM+ 
Sbjct: 61  ESDRGGTQQLYVMSAGGGGAQRISF-GPGRYSTPVWSPRGDLIAFTKQHQGRFMIGVMRP 119

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTPAYA 437
           DG  ER+L E  + + P WSP+GR L+F R   G + G +++++DL G NE  + TPA+A
Sbjct: 120 DGKGERILTEGYHNEGPAWSPNGRVLVFFRDTPGANGGPQVWTVDLTGYNEQRVETPAFA 179

Query: 438 SDPQWVGFMD 447
           SDP W   +D
Sbjct: 180 SDPSWSPLID 189



 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 7/190 (3%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           + F PRFSP+ Q V   +        ++ MD R  R   R+ N  ++  +P FS +G + 
Sbjct: 1   MTFAPRFSPDGQSVV-MSLQQGGNANIFKMDLR-SRQTTRLTNDAAIDTSPSFSPDGSQI 58

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +    +     +Y +       +R++       +  +SP    I F    +G+  + VM+
Sbjct: 59  VFESDRGGTQQLYVMSAGGGGAQRISFGPGRYSTPVWSPRGDLIAFTKQHQGRFMIGVMR 118

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMKKDGSQERLLVED 389
            +G   +RI  +   +   P WSP G ++ F + +        +  +   G  E+ +   
Sbjct: 119 PDGKG-ERILTEGYHNE-GPAWSPNGRVLVFFRDTPGANGGPQVWTVDLTGYNEQRVETP 176

Query: 390 SNLQAPTWSP 399
           +    P+WSP
Sbjct: 177 AFASDPSWSP 186



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 69/190 (36%), Gaps = 14/190 (7%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
             D  S ++ + +   + I K  L       +       +   I   P FSP+  ++ + 
Sbjct: 8   SPDGQSVVMSLQQGGNANIFKMDLR------SRQTTRLTNDAAIDTSPSFSPDGSQIVFE 61

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D     ++Y+M      A +RI         P +S  G     + Q      I  +  
Sbjct: 62  S-DRGGTQQLYVMSAGGGGA-QRISFGPGRYSTPVWSPRGDLIAFTKQHQGRFMIGVMRP 119

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESD---REGKEQLYVMQSNGSDQKRISQDKE 346
                  LT         ++SP+   +VF  D     G  Q++ +   G +++R+  +  
Sbjct: 120 DGKGERILTEGYHNE-GPAWSPNGRVLVFFRDTPGANGGPQVWTVDLTGYNEQRV--ETP 176

Query: 347 ASYFDPVWSP 356
           A   DP WSP
Sbjct: 177 AFASDPSWSP 186


>gi|317153133|ref|YP_004121181.1| WD40-like beta Propeller containing protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316943384|gb|ADU62435.1| WD40-like beta Propeller containing protein [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 440

 Score =  228 bits (581), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 82/424 (19%), Positives = 163/424 (38%), Gaps = 29/424 (6%)

Query: 32  IHAFVKVATNSANYSPVSIA--FTKFVSIDELG----GKVSEVVSKDLQRSDVFNLISQD 85
               + V  +      V+I     K +   +L         E+V  +L       LI   
Sbjct: 27  ASGPLTVDIHGPGQRMVNIILLPPKGLGGSQLPTAQAKAFEELVVNNLNYIPFLKLIPTS 86

Query: 86  SFKQKITN---PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
                  +         F+        + +T      G +   +E R+++    ++++GK
Sbjct: 87  ELLGGDPSRGVGGGDIDFKPMQMARIDLCMT-----TGWNGRYLEARVFETFGGRRVVGK 141

Query: 143 KFF-SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
            +      +  + A        +++TG+KG F+S + FV +   +      +  +   G 
Sbjct: 142 SYNDVGEITLAQAADRFCSAFLEALTGKKGFFDSPVAFVRQDGKA----KEIYTVLPQGR 197

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            ++ +T         P +S +  K+ +         L VY  D++  +           I
Sbjct: 198 ELKRITN-LGGYNLSPSWSADGSKIIFTHIASTRHELGVY--DSKTQKITLYSQGLGQTI 254

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           ++P F   G + ++++  + A DI  +D        L  + +I++S S+    +++ F S
Sbjct: 255 ISPVFGP-GDKPIVALNVNGATDIQELDASFKPQRVLARSPYIDVSPSFDRTGTKMAFTS 313

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            R G   +Y+M     + +R++   + +   P  SP G  IA+T  +G    I +     
Sbjct: 314 GRAGNPHVYLMDMKSGEVRRVTMTGKYN-THPCLSPDGRYIAYTNRTGSGHRIFLHDLAT 372

Query: 381 SQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYAS 438
            +E+ L     N + P + P G  + F+  + G  G KLY    +G    +I+T P  A 
Sbjct: 373 GREKQLTFGPGNDEYPAFDPDGYFVAFASNRSG--GFKLYLTTRHGDTPRVISTGPGQAF 430

Query: 439 DPQW 442
            P W
Sbjct: 431 APAW 434



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 43/136 (31%), Gaps = 7/136 (5%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +++ F   S  +G     L  M   G   R     +      P  SP+ + +AY      
Sbjct: 307 TKMAF--TSGRAGNPHVYLMDMKS-GEVRRVTMTGK--YNTHPCLSPDGRYIAYTN-RTG 360

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              R++L D    R  K++         P F  +G     +  +     +Y      +  
Sbjct: 361 SGHRIFLHDLATGRE-KQLTFGPGNDEYPAFDPDGYFVAFASNRSGGFKLYLTTRHGDTP 419

Query: 295 ERLTNTLFINISASYS 310
             ++       + ++ 
Sbjct: 420 RVISTGPGQAFAPAWD 435


>gi|148653367|ref|YP_001280460.1| WD40 domain-containing protein [Psychrobacter sp. PRwf-1]
 gi|148572451|gb|ABQ94510.1| WD40 domain protein beta Propeller [Psychrobacter sp. PRwf-1]
          Length = 449

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 102/448 (22%), Positives = 183/448 (40%), Gaps = 24/448 (5%)

Query: 2   SLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAF--VKVATNS-ANYSPVSIAFTKFVSI 58
           + R F A    + I+L      +      +      ++         +   +AF  F   
Sbjct: 18  ARRSFAAMTTTLLISLLGASAALMSVSAQAAEEEYDLEATITKKGETNQNQVAFVPFAGD 77

Query: 59  DELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
                 VS ++  +LQ + +  + SQ    Q  +  D       W  LG   LV G   +
Sbjct: 78  ST----VSSLIENNLQATPL-KITSQGLIGQPHSRDDLAVTLPAWQQLGIPYLVIGSSKQ 132

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
           +G +   + F + +V   + I G +               +  IY+ +TG++ D N+R++
Sbjct: 133 QGGNT-SITFEVIEVAQGRIIKGTQMVQGVDKKAAAN-KAAGRIYELLTGKQIDLNARLV 190

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +V E        +SL + D DG+N R L    D  ++ P  SP+ + VAY+    ++   
Sbjct: 191 YVEEKGSGKSKTSSLILSDADGSNKRLLAQVIDAAIYSPAISPDGRFVAYSVQLKDNSAN 250

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++  D +  +  + + + +   L+P FS +G + L S   +   DIY V  Q    E++ 
Sbjct: 251 LWKQDLQTRQLTRLV-DMKGSNLSPSFSPDGSKILFSSTVNGDSDIYRVSSQGGKAEQII 309

Query: 299 NTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +  +  +S SY+ + S  VF SD     +  +Y    +GS   +IS+   A+  +P  SP
Sbjct: 310 SLPYDQLSPSYASNGS-FVFVSDHASPNRPNIYRYSFSGSPV-QISRGGYAA--NPSISP 365

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           +G  I +           +M  +GS            AP +SP+G  +++S    G   S
Sbjct: 366 EGTKIGYLSGRSA----AIMSSNGSNVANYGATGIDAAPKFSPTGERVVYS---QGTKNS 418

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVG 444
            L    ++G     + T   A  P WV 
Sbjct: 419 NLVIRYVDGGKTITLPTEGVAKFPVWVP 446


>gi|163796930|ref|ZP_02190886.1| TolB protein [alpha proteobacterium BAL199]
 gi|159177677|gb|EDP62228.1| TolB protein [alpha proteobacterium BAL199]
          Length = 207

 Score =  226 bits (577), Expect = 4e-57,   Method: Composition-based stats.
 Identities = 93/205 (45%), Positives = 133/205 (64%), Gaps = 6/205 (2%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R  + +G+F  M  APRFS +G + ++S+ +D   D+Y +DL++    RLTN+  I+ S
Sbjct: 3   TRQQEVLGDFPGMTFAPRFSPDGNQVIMSLARDGVTDVYRMDLRTRRVTRLTNSASIDTS 62

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD +Q+ F SDR G +QLYVM SNG   KRIS   +  Y  PVWSP+GDLIAFTK 
Sbjct: 63  PSFSPDGTQVAFNSDRGGAQQLYVMDSNGGGVKRISF-GQGQYATPVWSPRGDLIAFTKI 121

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-----KLYSI 421
           +G +F IGVM+ DGS ERL+     ++AP+W+P+GR L++ +++  D+       KL++I
Sbjct: 122 AGGQFHIGVMRVDGSGERLISSGYLVEAPSWAPNGRVLVYFKQQRTDSAGRGGETKLFTI 181

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           DL G NE  + TP  ASDP W   +
Sbjct: 182 DLTGYNEREVVTPLDASDPAWSPLL 206



 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 86/206 (41%), Gaps = 11/206 (5%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              + +      + F PRFSP+  +V   +   + +  VY MD R  R   R+ N  S+ 
Sbjct: 3   TRQQEVLGDFPGMTFAPRFSPDGNQVI-MSLARDGVTDVYRMDLRT-RRVTRLTNSASID 60

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +P FS +G +   +  +  A  +Y +D      +R++       +  +SP    I F  
Sbjct: 61  TSPSFSPDGTQVAFNSDRGGAQQLYVMDSNGGGVKRISFGQGQYATPVWSPRGDLIAFTK 120

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-------SGEKFAI 373
              G+  + VM+ +GS ++ IS         P W+P G ++ + K         G +  +
Sbjct: 121 IAGGQFHIGVMRVDGSGERLISSG--YLVEAPSWAPNGRVLVYFKQQRTDSAGRGGETKL 178

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSP 399
             +   G  ER +V   +   P WSP
Sbjct: 179 FTIDLTGYNEREVVTPLDASDPAWSP 204



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 81/194 (41%), Gaps = 18/194 (9%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
             D N  I+ ++   V+ + +  L               +   I   P FSP+  +VA+ 
Sbjct: 22  SPDGNQVIMSLARDGVTDVYRMDLRTRRV------TRLTNSASIDTSPSFSPDGTQVAFN 75

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D     ++Y+MD+      KRI   +     P +S  G     +        I  + +
Sbjct: 76  S-DRGGAQQLYVMDSNGGG-VKRISFGQGQYATPVWSPRGDLIAFTKIAGGQFHIGVMRV 133

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVF-------ESDREGKEQLYVMQSNGSDQKRIS 342
             +  ERL ++ ++  + S++P+   +V+        + R G+ +L+ +   G +++ + 
Sbjct: 134 DGSG-ERLISSGYLVEAPSWAPNGRVLVYFKQQRTDSAGRGGETKLFTIDLTGYNEREVV 192

Query: 343 QDKEASYFDPVWSP 356
              +AS  DP WSP
Sbjct: 193 TPLDAS--DPAWSP 204


>gi|301513293|ref|ZP_07238530.1| translocation protein TolB [Acinetobacter baumannii AB058]
          Length = 258

 Score =  225 bits (574), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 62/261 (23%), Positives = 120/261 (45%), Gaps = 8/261 (3%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   + +L + D DG   + +  SRD I   P ++P+ +K+AY +++ +    +YL D  
Sbjct: 3   TPAERYTLQIADTDGEQPKTVLSSRDPI-LSPAWTPDAKKIAYVSFETKRPA-IYLQDLS 60

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + + +F+ +  AP FS +GK  L +   +   +IY +DL +   +R+TN   I+ 
Sbjct: 61  TGT-REVLTSFKGLNGAPSFSPDGKSMLFTASMNGNPEIYQMDLSTRQVKRMTNDSGIDT 119

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A Y+PD    +F SDR G  Q+Y         KR++     +      S  G  IA   
Sbjct: 120 EARYTPDGKAFIFTSDRGGSPQIYRYDFGNGSVKRLTFKGSFNARG-TLSADGKKIALVH 178

Query: 366 F-SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             SG  + + +   +     +L   S  ++P++SP+G+ ++++ ++       +  +  +
Sbjct: 179 RPSGSNYKVAIQDINTGIVNILTPTSLDESPSFSPNGQMVVYATREGNRGLLSI--MSTD 236

Query: 425 GRNE-TLINTPAYASDPQWVG 444
           GR    L +      +P W  
Sbjct: 237 GRFRMNLPSEQGEVREPAWAP 257


>gi|223938135|ref|ZP_03630032.1| WD40 domain protein beta Propeller [bacterium Ellin514]
 gi|223893179|gb|EEF59643.1| WD40 domain protein beta Propeller [bacterium Ellin514]
          Length = 392

 Score =  224 bits (570), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 98/433 (22%), Positives = 171/433 (39%), Gaps = 46/433 (10%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVA-TNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           MKIN   +  L       ++ A   V         P  I     + I     +V+ V++ 
Sbjct: 1   MKINFFKIAALALVLSAGTLFAEDHVIPIVKPGNEP-GITPPTPIVISGFSDEVAHVLNY 59

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL      N+            P   P            +V+G       +   V+ +L 
Sbjct: 60  DLTVMGFTNV------------PSGTPNVP---------VVSGS------NNGNVQGQL- 91

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
               +  +  K +    AS R  AH ++DD+   +T   G  ++RI F  ++      ++
Sbjct: 92  -SYGKTVLFSKAYSG--ASTRSQAHRLADDVVLKLTSVNGIASTRIAFKVDTGA----QS 144

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + V D DG N + +T S + I+  P + P +  + Y TY        Y          +
Sbjct: 145 EIYVSDFDGHNPQAVT-SDNTIVASPCWFPGRLALCYLTYKLGPAKVFY--QNLATGERR 201

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +  +    ++P  S +GK   + + K  + D+Y  +L  +  ++LT+T     S  +SP
Sbjct: 202 NVAQYPGDGISPAVSKDGK-VAMVLSKSGSPDLYVCNLDGSGMKQLTHTREDESSPCFSP 260

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I F S    +  L  +  +G   KRI     ++  +P WSP G  I FT  +   F
Sbjct: 261 DGQWICFASKGGERRALSKVSVDGGSVKRIPTAGVSNPSEPDWSPDGKYIVFTSQNSRGF 320

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN--GRNET 429
            I V+  +G    +L E    + P+W+P+ R+++F+R+K G+    L  +          
Sbjct: 321 NICVVPAEGGTAIVLTEG---EDPSWAPNSRTVVFARRKGGNRVLSLLDVPTKQVKDVSR 377

Query: 430 LINTPAYASDPQW 442
           +    A  S P W
Sbjct: 378 VSGNSAGNSQPSW 390



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 67/178 (37%), Gaps = 7/178 (3%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R    V      +IY  D   +  + +T+   I  S  + P    + + + + G  +++
Sbjct: 132 TRIAFKVDTGAQSEIYVSDFDGHNPQAVTSDNTIVASPCWFPGRLALCYLTYKLGPAKVF 191

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                  +++ ++Q        P  S  G  +A          + V   DGS  + L   
Sbjct: 192 YQNLATGERRNVAQY-PGDGISPAVSKDGK-VAMVLSKSGSPDLYVCNLDGSGMKQLTHT 249

Query: 390 SNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA--SDPQWVG 444
              ++ P +SP G+ + F+ K  G     L  + ++G +   I T   +  S+P W  
Sbjct: 250 REDESSPCFSPDGQWICFASK--GGERRALSKVSVDGGSVKRIPTAGVSNPSEPDWSP 305



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 66/186 (35%), Gaps = 21/186 (11%)

Query: 269 GKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           GK  L S     A        L  +   +LT+   I         S++I F+ D   + +
Sbjct: 94  GKTVLFSKAYSGASTRSQAHRLADDVVLKLTSVNGIA--------STRIAFKVDTGAQSE 145

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +YV   +G + + ++ D       P W P    + +  +      +        + R + 
Sbjct: 146 IYVSDFDGHNPQAVTSD-NTIVASPCWFPGRLALCYLTYKLGPAKVFYQNLATGERRNVA 204

Query: 388 E-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASD 439
           +   +  +P  S  G+  +   K        LY  +L+G     +        +P ++ D
Sbjct: 205 QYPGDGISPAVSKDGKVAMVLSKSG---SPDLYVCNLDGSGMKQLTHTREDESSPCFSPD 261

Query: 440 PQWVGF 445
            QW+ F
Sbjct: 262 GQWICF 267


>gi|220904131|ref|YP_002479443.1| WD40 domain-containing protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868430|gb|ACL48765.1| WD40 domain protein beta Propeller [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 439

 Score =  223 bits (569), Expect = 4e-56,   Method: Composition-based stats.
 Identities = 68/423 (16%), Positives = 170/423 (40%), Gaps = 21/423 (4%)

Query: 32  IHAFVKVATNSANYSPVSIAFT-----KFVSIDELGGKVSEVVSKDLQRSDVFNLISQDS 86
             A ++V       + V++A         V    +G  + ++V ++L       L    +
Sbjct: 20  AQAAMRVDIYGPGQNIVNLALAAPLKGPQVQATGMGADLQKIVQENLSFLPFMRLTDPKA 79

Query: 87  FKQKITNPDSIP---RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK 143
               +      P    F+ +   G+ ++VT    +       V+ R ++     ++ GK+
Sbjct: 80  VLGGVVLAGYEPPTLDFKRFQLAGSDIVVTTFWPEGDSGTRPVQIRAFETNTGGRLFGKE 139

Query: 144 F-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           +   +     ++A     D+ +++TG    F S + F+ ++   G + +++ ++   G +
Sbjct: 140 YPKVNARDLPEVADRFCADLLEALTGNGAFFRSTLAFIKKN---GKMDSNVWLVKPTGRD 196

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R +T    +    P +SP+ + V +   D +          R     +RI    ++++ 
Sbjct: 197 LRQITNMPGE-SMSPAWSPDGRFVVFTQIDPKSHALGVW--DRSTGKVQRIRFPGNVVIG 253

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P F  +  +  +++   +   I+ ++        L     IN+S ++    +++ F S R
Sbjct: 254 PAFMPD-NKVAVALSNGKYPVIFQLNHVFQKERVLEQNDSINVSPTFDSTGTKMAFTSSR 312

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGS 381
            G  Q+++         R+S++   +  +   SP G L+ +++ +     I V     G+
Sbjct: 313 LGGPQIFLKDLGSGSVTRVSKNGTYN-SEANLSPDGTLVVYSRMTEYGHRIFVQDMLTGT 371

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDP 440
           + ++     + + P++      + F+  + G  G  +Y    +G +   + T    +S P
Sbjct: 372 ERQISFGPGSDEQPSFCADSYFIAFTSSRGGGRG--IYLTTRHGGDAKRVPTGGGDSSFP 429

Query: 441 QWV 443
           +W 
Sbjct: 430 RWG 432


>gi|303328322|ref|ZP_07358760.1| putative TolB protein [Desulfovibrio sp. 3_1_syn3]
 gi|302861652|gb|EFL84588.1| putative TolB protein [Desulfovibrio sp. 3_1_syn3]
          Length = 442

 Score =  222 bits (567), Expect = 7e-56,   Method: Composition-based stats.
 Identities = 72/430 (16%), Positives = 171/430 (39%), Gaps = 21/430 (4%)

Query: 25  GGFFPTSIHAFVKVATNSANYSPVSIAFT-----KFVSIDELGGKVSEVVSKDLQRSDVF 79
           G    T   A ++V   +   + V++A              +G ++  +V ++L      
Sbjct: 17  GPLPGTRAEAAMRVDIMNPGQNIVNLALAAPLKGPQAQATGMGAELQTLVEQNLSFLPFM 76

Query: 80  NLISQDSFKQKITNPDSIP---RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
            L    +    +      P    F+ +   G+ ++VT            V+ R ++    
Sbjct: 77  RLTDPKAVLGGVVLAGYEPPALDFKRFQLAGSDIVVTTFWPDGDSGTKPVQIRAFETNTG 136

Query: 137 KQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            ++ GK++   +     ++A     D+ +++TG    F S + FV ++   G +  ++ +
Sbjct: 137 GRLFGKEYPKVNKRDLPEVADRFCADLLEALTGNGAFFRSTLAFVKKT---GKMSANVWL 193

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +   G ++R +T    +    P +SP+ + V ++  D +          R     +RI  
Sbjct: 194 VKPTGRDLRQITNIPGE-ALSPAWSPDGRFVVFSHIDPKSHALGVW--DRSTGKVQRIRF 250

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             ++++ P F  +  +  +++   +   I+ ++        L  +  IN+S ++    ++
Sbjct: 251 PGNVVIGPAFMPD-NKVAVALSNGKYPVIFLLNHVFQKERVLEQSNAINVSPTFDSTGTK 309

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + F S R G  Q+++         R+S++   +  +   SP G L+ +++ +     I V
Sbjct: 310 MAFTSSRLGGPQIFLKDLGSGSITRVSKNGTYN-TEANLSPDGTLVVYSRMTDFGHRIFV 368

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                  ER +     + + P++      + F+  ++G  G  +Y    +G +   + T 
Sbjct: 369 QDMLTGMERQITFGPGSDEQPSFCADSYFIAFASTRNGGRG--IYLTTRHGGDAKQVPTG 426

Query: 435 AY-ASDPQWV 443
              AS P+W 
Sbjct: 427 GGAASFPRWG 436


>gi|242279944|ref|YP_002992073.1| hypothetical protein Desal_2478 [Desulfovibrio salexigens DSM 2638]
 gi|242122838|gb|ACS80534.1| WD40 domain protein beta Propeller [Desulfovibrio salexigens DSM
           2638]
          Length = 457

 Score =  222 bits (565), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 81/434 (18%), Positives = 153/434 (35%), Gaps = 34/434 (7%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFVSIDEL---------------GGKVSEVVSKDLQRS 76
               + V         V+I      ++                   G  S+ ++KDL   
Sbjct: 31  AADTLTVDIYGPGQRKVNIILLPPKTVPAGKYEGSKEKDLPLPAEAGSFSKDLAKDLAFL 90

Query: 77  DVFNLISQDSF----KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
              N++           +   P  I   +        + VT            +  R   
Sbjct: 91  PFLNIVPVTDILGGDPSRGVRPGDI-DIKPLRLSKVDLAVTTGWEIRPNGEKNLLIRCIG 149

Query: 133 VKDRKQIIGKKFF-SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
             + + I+GKK+   +     +IA   S  + + +TG  G F S I FV ++        
Sbjct: 150 TFNGRTILGKKYSMVTEEMLPRIADRFSSHLMRILTGRDGFFESSIAFVRKTGKD----K 205

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  +   G N+R ++ S   I   P +S +  ++ +        L       R      
Sbjct: 206 EIYTVSPQGRNLRQIS-SLGGINLSPNWSHDGNRLVFTRLGSRQHLLCVW--DRATGKID 262

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +     + ++ P F  +G  A  ++  +   DI+ ++      + L  +  I +S  +  
Sbjct: 263 QKSFPGNTVIGPEFLPDGNMAA-TLTMNGNSDIFLINGNYKPKKALAKSWAIEVSPDFDR 321

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              ++VF S R G   ++++        RI+ + + +  +P  SP G  +AF++ +    
Sbjct: 322 TGEKMVFTSARFGNPHIFLLDMKSGVVTRITTEGKYN-TNPTISPDGRYVAFSRQTPLGH 380

Query: 372 AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            I V      QER L     N + P + P G  + FS  ++G    K+Y    +G    L
Sbjct: 381 RIFVHDLKTGQERQLTFGPGNDEDPAFGPDGYFIAFSSSRNGK--YKIYLTTRHGDPAML 438

Query: 431 INT-PAYASDPQWV 443
           + T    A  P W 
Sbjct: 439 VPTGNGVAKAPAWG 452


>gi|163796374|ref|ZP_02190335.1| Periplasmic component of the Tol biopolymer transport system [alpha
           proteobacterium BAL199]
 gi|159178516|gb|EDP63058.1| Periplasmic component of the Tol biopolymer transport system [alpha
           proteobacterium BAL199]
          Length = 228

 Score =  221 bits (563), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 77/210 (36%), Positives = 117/210 (55%), Gaps = 5/210 (2%)

Query: 26  GFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSEVVSKDLQRSDVFNL 81
           G F     A +++        P+ +A   F         +G +++ ++  DL+RS +F  
Sbjct: 20  GGFAKPAAAELRIDITQGRVEPLPVAIADFKGEGIEPTRIGREIAGIIRADLERSGLFKP 79

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
           I Q++F Q     D +PRF DW  + AQ LV GRV + G+ ++RVEFRLWDV   + + G
Sbjct: 80  IDQNAFIQTDLQFDVVPRFGDWRLINAQALVHGRVTEIGQGQVRVEFRLWDVFAEQYMTG 139

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
                 P S R+ AH I+D IY+ +TGE G F+SRI++++ES      K  L +MD+DGA
Sbjct: 140 TTLTVIPESLRRAAHIIADLIYKRLTGEDGYFDSRIVYIAESGAQNRRKKQLAIMDQDGA 199

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           N ++LT     ++  PRFSP  Q++ Y  Y
Sbjct: 200 NHKFLTDGG-TLVLTPRFSPTHQEITYLAY 228


>gi|257455248|ref|ZP_05620483.1| putative TolB periplasmic receptor [Enhydrobacter aerosaccus SK60]
 gi|257447210|gb|EEV22218.1| putative TolB periplasmic receptor [Enhydrobacter aerosaccus SK60]
          Length = 436

 Score =  221 bits (562), Expect = 3e-55,   Method: Composition-based stats.
 Identities = 91/450 (20%), Positives = 168/450 (37%), Gaps = 40/450 (8%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSP---VSIAFTKFVSIDELGGKVSE 67
           +N       ++ L+    P   +A   V       +P   + IA   F         +S 
Sbjct: 1   MNKTFFKAAIIALVTTAVPPLANAADNVDFTLVKQAPRSNLQIAIVPFAG----AESISG 56

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +V+ DL     F L    +  ++  +   +     W       LV G   +  +  + + 
Sbjct: 57  IVTNDLTNLGQFTL--DSNLPERPHSSSEV-TLPVWQHKAVPYLVVGN-TRSNRGNVEIN 112

Query: 128 FRLWDVKDRKQIIGKKFFSSPA---SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           F + +V   + + G +  +S     S R   H ++D IY+ +TG KGDF+ RI +V E+ 
Sbjct: 113 FEVINVATGEVMQGLQTVTSKNNSQSLRMAGHKVADRIYEILTGIKGDFSGRIAYVVETG 172

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                 + L + D DG N + +      I      S + Q   +    D       +   
Sbjct: 173 KPKNRVSRLVISDVDGFNPKVIYEFNGTIKTLNT-SADNQTFTFQVQPDTLGYPQVMSAN 231

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +  A   + NF++M      S +G+    S  ++    IY    Q   + RLTN     
Sbjct: 232 IVSGAVSNLTNFKAMNYGASVSKDGRVIFSSSFENGIPQIYL--AQGGNSRRLTNDPVGA 289

Query: 305 ISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           I  S++PD    V+ SDR        K Q+Y+       ++R++    +S      S  G
Sbjct: 290 IYPSWAPDGQSFVYTSDRAGGKKGGNKGQIYLYNLATGSEQRLTGGGLSSMG--RISNDG 347

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +++   + +     VM         +      +AP  SP+G+  I+S          +
Sbjct: 348 KKMSYLSGANQG---AVMDLGSRSVTAVNNVGLSEAPGVSPNGQHYIYS-------NKNV 397

Query: 419 YSIDLNGRNETLINTPAYASD-----PQWV 443
            +I  NG++ ++  +     +     P W+
Sbjct: 398 ITIVSNGKSISISPSQNGVPNGLIYGPLWL 427


>gi|332704880|ref|ZP_08424968.1| WD40-like beta Propeller containing protein [Desulfovibrio
           africanus str. Walvis Bay]
 gi|332555029|gb|EGJ52073.1| WD40-like beta Propeller containing protein [Desulfovibrio
           africanus str. Walvis Bay]
          Length = 440

 Score =  220 bits (560), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 71/427 (16%), Positives = 156/427 (36%), Gaps = 24/427 (5%)

Query: 29  PTSIHAFVKVATNSANYSPV------SIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLI 82
                  + +       +         +  T    +  +   +   +  +L+       +
Sbjct: 20  TVQAQGKLSIDIFGPGQTKTNLMVAQPLPATNGQPLPRMAADMQAQIRDNLRFLPFLRQV 79

Query: 83  SQDSFKQ--KITNPDSI-PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
           +        ++  P +    F+ +      +L T         +  V FR+++      +
Sbjct: 80  ASTEVIGGDRVEAPKAPGIDFKRFQLSRVDLLTTSAWTPGADGKASVAFRVYETFTGTML 139

Query: 140 IGKKFF-SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
            G+++    P     IA +    + + +TG  G F SR+ FV            + V   
Sbjct: 140 FGQEYADIKPVHMPDIADSFCSRLMEVLTGRVGFFQSRLAFV----RKDQSGKEIWVAGP 195

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            G N R +T S   +   P +S + +++ +          +  M        + +    S
Sbjct: 196 TGYNARKIT-SLGGVNTSPAWSLDGKRLLFTHVA--KTQHMLGMADMDTGKVQTVDLPGS 252

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIV 317
            +++P +  +G R  +++  +   +IY +      T   L  +  I++S S+     ++ 
Sbjct: 253 SVISPTYMPDG-RLAVTLDIEGQPNIYLLGRDWKPTGTPLAKSWSIDVSPSFDRAGRKMA 311

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F S R G   ++V+       +R++ + + +  +P  SP G+ +AF++ +     I V+ 
Sbjct: 312 FVSGRLGNPHIFVLDIPTGKVQRVTYEGKYN-TNPTMSPDGNFVAFSRDTDVGHRIFVID 370

Query: 378 KDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-A 435
                ER +       + P++ P G  + FS  + G    KLY    +G    ++ T   
Sbjct: 371 LRTGLERQVTFGPGFDEEPSFGPEGYFIAFSSSRSG--IYKLYLTTRHGDEPVMLQTGSG 428

Query: 436 YASDPQW 442
            A  P W
Sbjct: 429 EARAPSW 435


>gi|281357813|ref|ZP_06244299.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Victivallis vadensis ATCC BAA-548]
 gi|281315760|gb|EFA99787.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Victivallis vadensis ATCC BAA-548]
          Length = 404

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 89/387 (22%), Positives = 154/387 (39%), Gaps = 44/387 (11%)

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           V + V+  L+    F+++                         AQ  + G       DR+
Sbjct: 51  VGQEVNNFLRACGWFDVVP---------------------DPKAQFQLAGS---RDGDRI 86

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE---KGDFNSRILFVS 181
           R     +D+      +G     +  S R IA  + + I +    +   KG   SRI F +
Sbjct: 87  R-----FDLTQGGAPVGSWQAGAAGSDRAIAKNVVNAIIEKTFKDLKVKGFCASRIAFCA 141

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++        ++ V D DG N+  +T   + +  EP + P+ + + Y+ Y    I  V  
Sbjct: 142 QTAPG---VRNIYVCDIDGGNVEQITRF-NTLCVEPCWFPDGRSIGYSKYGRTGIDVV-- 195

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             T   R  + +  FR +      S +G++  + +  D  +D+Y + + S    RLT  +
Sbjct: 196 QTTLNPRRSRVLSAFRGINAGAAISPDGRQLAVILSPDHQVDLYVMPVGSTRLTRLTRNI 255

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRI-SQDKEASYFDPVWSPQGD 359
            +  S  +SPD SQ+ + SD  G  ++Y +   +GS +KR+           P WS  G 
Sbjct: 256 AVEASPCWSPDGSQLAYVSDETGSPRIYTVTVHDGSGRKRLPVIPGGRDAVTPDWSKDGK 315

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            I +       + I V      + +   E   N ++P W+   R ++  R  DG   S L
Sbjct: 316 -IVYATKVNGNYTIAVYDTKTGENKRATEAPGNWESPAWAADNRQVVCKR-ADGSGKSAL 373

Query: 419 YSIDL-NGRNETLINTPAYASDPQWVG 444
           Y +D   G+   L+ TP   S P W  
Sbjct: 374 YVVDTWTGKTRLLVATPYNLSMPVWSP 400


>gi|121591680|ref|ZP_01678914.1| tolB protein [Vibrio cholerae 2740-80]
 gi|121546465|gb|EAX56689.1| tolB protein [Vibrio cholerae 2740-80]
          Length = 265

 Score =  211 bits (538), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 28/270 (10%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L  +L+LIG  F    +A +++       +  P++I   K+    +L   VS V++
Sbjct: 1   MFKRLVFVLMLIGTGFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ +      Q   + + +  F  W S+G   L+TG + +  +    + ++L
Sbjct: 61  SDLQRSGKFSPVPTSKMPQTPYSEEQV-NFGKWTSMGVDSLLTGTITQNAEGSYVISYQL 119

Query: 131 WDVKDRK---------------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            D+   +                      +  K      +  R+ AH I+D +Y+ +TGE
Sbjct: 120 VDIVRGQLTQGQSKALSQDGQLVLSKDHVLFNKVATVPASRMREYAHRIADLVYEELTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G F +RI +V  +         L + D DG N R +  S+ Q L  P +SP+ Q +AY 
Sbjct: 180 RGAFLTRIAYVVVN-DKDPYPYQLRIADYDGYNERLVLRSK-QPLMSPAWSPDGQTLAYV 237

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           ++ +     +Y+M+    +  +++ +F   
Sbjct: 238 SFQNGQA-EIYMMNIYSGK-REKLTSFPRH 265



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 7/83 (8%)

Query: 359 DLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDT 414
             IA+   + +    + + +   DG  ERL++     L +P WSP G++L +   ++G  
Sbjct: 185 TRIAYVVVNDKDPYPYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQNGQ- 243

Query: 415 GSKLYSIDL-NGRNETLINTPAY 436
            +++Y +++ +G+ E L + P +
Sbjct: 244 -AEIYMMNIYSGKREKLTSFPRH 265



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            QL +   +G +++ + + K+     P WSP G  +A+  F   +  I +M     +   
Sbjct: 200 YQLRIADYDGYNERLVLRSKQ-PLMSPAWSPDGQTLAYVSFQNGQAEIYMMNIYSGKREK 258

Query: 386 LVE 388
           L  
Sbjct: 259 LTS 261



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 270 KRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            R    V  D+    Y +   D        +  +    +S ++SPD   + + S + G+ 
Sbjct: 185 TRIAYVVVNDKDPYPYQLRIADYDGYNERLVLRSKQPLMSPAWSPDGQTLAYVSFQNGQA 244

Query: 327 QLYVMQSNGSDQKRISQDKEA 347
           ++Y+M      +++++     
Sbjct: 245 EIYMMNIYSGKREKLTSFPRH 265


>gi|153877364|ref|ZP_02004199.1| translocation protein TolB precursor [Beggiatoa sp. PS]
 gi|152066172|gb|EDN65801.1| translocation protein TolB precursor [Beggiatoa sp. PS]
          Length = 216

 Score =  211 bits (536), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 58/213 (27%), Positives = 106/213 (49%), Gaps = 10/213 (4%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             + VY+ +    R   R+     +  AP +S +GKR   ++ +D   +IY ++L S   
Sbjct: 12  KRMVVYIQEIGTGR-RTRVSAKPGLNAAPAWSPDGKRLAFTLSQDGNPEIYVMNLYSRGL 70

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +RLTN   I+    ++ D   IVF SDR G+ Q+Y +  NG   +R++     +   P  
Sbjct: 71  KRLTNHQAIDTEPEWASDGRTIVFTSDRSGQPQIYRISVNGGKAQRLTFHGSYNAR-PRL 129

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           SP G  +A    SG  + I V+     Q ++L + +  ++P+++P+G  +I++      T
Sbjct: 130 SPDGSQLAVLHSSGRGYKIAVITLKTGQMKVLSQTTLDESPSFAPNGSMIIYA------T 183

Query: 415 GSKLYSIDLNGRNETL--INTPAYASDPQWVGF 445
           GS+L ++ ++GR      ++  A   +P W  F
Sbjct: 184 GSELAAVSVDGRVRQRLSVDMNAQVREPAWSPF 216



 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 91/216 (42%), Gaps = 11/216 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G  +  + + +  G   R    ++  +   P +SP+ +++A+    D +   +Y+M+  
Sbjct: 9   KGAKRMVVYIQEI-GTGRRTRVSAKPGLNAAPAWSPDGKRLAFTLSQDGNP-EIYVMNL- 65

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R  KR+ N +++   P ++S+G+  + +  +     IY + +     +RLT     N 
Sbjct: 66  YSRGLKRLTNHQAIDTEPEWASDGRTIVFTSDRSGQPQIYRISVNGGKAQRLTFHGSYNA 125

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               SPD SQ+          ++ V+       K +SQ        P ++P G +I +  
Sbjct: 126 RPRLSPDGSQLAVLHSSGRGYKIAVITLKTGQMKVLSQTT--LDESPSFAPNGSMIIYAT 183

Query: 366 FSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSP 399
            S     +  +  DG   + L  D  + ++ P WSP
Sbjct: 184 GS----ELAAVSVDGRVRQRLSVDMNAQVREPAWSP 215


>gi|218679309|ref|ZP_03527206.1| translocation protein TolB [Rhizobium etli CIAT 894]
          Length = 196

 Score =  210 bits (535), Expect = 3e-52,   Method: Composition-based stats.
 Identities = 78/185 (42%), Positives = 120/185 (64%), Gaps = 2/185 (1%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           ++  +  + +       +  +A V++  N  N  P+ IA T F    ++G +VS+V++ D
Sbjct: 14  IRALVVAVGMTAAAVVSSPANARVEININKGNIQPLPIAVTDFQG--DMGAQVSQVIAAD 71

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           LQRS +F  I++ +F +KI+NPD+ PRF+DW  + AQ LVTGRV KE   RLR EFRLWD
Sbjct: 72  LQRSGLFAPINKTAFIEKISNPDASPRFEDWKVINAQALVTGRVTKEADGRLRAEFRLWD 131

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
               +Q+ G++F++ P +WR++AH I+D IY+ ITGE+G F++R++FVSES      K  
Sbjct: 132 TFAGQQMAGQQFYTQPENWRRVAHIIADAIYKQITGEEGYFDTRVVFVSESGTKQQRKRQ 191

Query: 193 LCVMD 197
           L +MD
Sbjct: 192 LAIMD 196


>gi|29840730|ref|NP_829836.1| translocation protein TolB [Chlamydophila caviae GPIC]
 gi|32699690|sp|Q821G5|TOLB_CHLCV RecName: Full=Protein tolB; Flags: Precursor
 gi|29835080|gb|AAP05714.1| conserved domain protein [Chlamydophila caviae GPIC]
          Length = 427

 Score =  209 bits (532), Expect = 8e-52,   Method: Composition-based stats.
 Identities = 69/324 (21%), Positives = 125/324 (38%), Gaps = 14/324 (4%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--IKNS 192
           + +Q          +S R+  H  +D I+ ++T   G  + +I+F            +  
Sbjct: 105 NHQQFHSLVLTEDISSNRQKIHEAADKIHYALTKVPGISSGKIVFSLSKNPQDGELKQGE 164

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L  +D DGAN+R LT     +   P +        Y     +  +    + +  +   K+
Sbjct: 165 LWSVDYDGANLRALTQENS-LSITPNWMNIGNCNPYLYVSYKYGIPKIFLGSLENTTGKK 223

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ------SNATERLTNTLFINIS 306
           + N +     P FS   K            D++                 L  T     +
Sbjct: 224 VLNLQGNQFMPTFSPRKKLLAFISDTYGNPDLFLQSFSLSKGVMGKPRRVLNETFGTQGN 283

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S+SPD S++VF S+R+G+ +LY++Q +      R+   K  +   P WSP G  IAF  
Sbjct: 284 PSFSPDGSKLVFVSNRDGRPRLYIIQIDPEIQTPRLLTKKYRNSSCPSWSPDGKKIAFCS 343

Query: 366 FSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL- 423
                  I +     G   +L     + + P+W+   + L++S    G+  S+LY + L 
Sbjct: 344 VIKGVRQICLYDLSTGKDYQLTTTPIDKEGPSWAIDSQHLVYSAGNSGE--SELYLLSLI 401

Query: 424 NGRNETLINTPAYASDPQWVGFMD 447
             + + ++        P W GF +
Sbjct: 402 TQKTKKIVIGLGEKRFPSWGGFPN 425


>gi|329943315|ref|ZP_08292089.1| WD40-like Beta Propeller Repeat family protein [Chlamydophila
           psittaci Cal10]
 gi|332287891|ref|YP_004422792.1| putative translocation protein tolB [Chlamydophila psittaci 6BC]
 gi|313848463|emb|CBY17467.1| putative TolB protein [Chlamydophila psittaci RD1]
 gi|325506662|gb|ADZ18300.1| putative translocation protein tolB [Chlamydophila psittaci 6BC]
 gi|328814862|gb|EGF84852.1| WD40-like Beta Propeller Repeat family protein [Chlamydophila
           psittaci Cal10]
 gi|328915155|gb|AEB55988.1| tolB protein, putative [Chlamydophila psittaci 6BC]
          Length = 427

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 68/326 (20%), Positives = 126/326 (38%), Gaps = 14/326 (4%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--IK 190
            ++ + +         AS R+  H  +D I+ ++T   G  + +I+F            +
Sbjct: 103 TQNYQPMHSLVLTEDNASNRQKIHEAADKIHYALTSVPGISSGKIIFSLSKNPKDSELKQ 162

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L  +D DG N+R LT     +   P +     K  Y     +  +    + +  +   
Sbjct: 163 GELWSVDYDGGNLRPLTQENS-LSITPNWMNIGSKNPYLYVSYKFGIPKIFLGSLENTTG 221

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ------SNATERLTNTLFIN 304
           K++ + +     P FS   K            D++                 L  T    
Sbjct: 222 KKVLHLQGNQFMPAFSPKKKLLAFISDSYGNPDLFLQSFSLSKGAMGKPRRVLNETFGTQ 281

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAF 363
            + S+SPD S++VF S+++G+ +LY++Q +      R+   K  +   P WSP G  IAF
Sbjct: 282 GNPSFSPDGSKLVFVSNKDGRPRLYILQIDPEIQSPRLLTKKYRNSSCPSWSPDGKKIAF 341

Query: 364 TKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    I +     G   +L     + + P+W+   + L++S    G+  S+LY + 
Sbjct: 342 CSVIKGVRQICLYDLATGKDYQLTTTPVDKEGPSWAVDSQHLVYSAGNSGE--SELYLLS 399

Query: 423 L-NGRNETLINTPAYASDPQWVGFMD 447
           L   + + ++        P W GF D
Sbjct: 400 LITQKTKKIVIGLGEKRFPSWGGFPD 425


>gi|327399145|ref|YP_004340014.1| WD40-like beta Propeller containing protein [Hippea maritima DSM
           10411]
 gi|327181774|gb|AEA33955.1| WD40-like beta Propeller containing protein [Hippea maritima DSM
           10411]
          Length = 421

 Score =  206 bits (525), Expect = 5e-51,   Method: Composition-based stats.
 Identities = 86/414 (20%), Positives = 178/414 (42%), Gaps = 21/414 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV--SIDELGGKVSEVVS 70
           MK  +  L  ++          F K+  ++  Y P++I    FV  +   +  +    + 
Sbjct: 1   MKRFVVFLAFIVFIGLNAQADTF-KIEISNPKYKPINIGLWGFVKNTPTSISKRFLSTLK 59

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
           +DL+ S +F+      F      P  +             ++ G    EGK    V  R+
Sbjct: 60  RDLKVSGLFSWDETQHFSYD--APSKVVNGIA-KLDNLDYVIYGDAYIEGKSIY-VNVRI 115

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
            DV     +  K + ++  S   +A+ + D +   +TG  G F S+I F           
Sbjct: 116 TDVLKNSVLFEKTYTTNEYSLGWLANRVVDVLIGYVTGVYGPFESKIAFAL----GDGRV 171

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           + + V D +G N+  +T   +  +  P++  +  ++ + +Y       ++L +    +  
Sbjct: 172 SDIYVCDFNGENVVRITNWHNFNIL-PKWVSD-DELTFLSYRYGKPA-LFLFNVFSGKLS 228

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           K   N    I A R+        I   +  +++IY+V+ +    ++LTN   IN+S +++
Sbjct: 229 KLFSNSNLSISASRYM---GYFAIPFNRFGSVNIYAVNARGRVIKKLTNDPSINVSPTFT 285

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           PD S++VF S+R G  Q+Y+   +  D   R++ + + +   P  SP G  IA+      
Sbjct: 286 PDFSKMVFVSNRGGNPQIYIKDLSSFDSPVRLTFNGKYN-SSPAVSPDGKKIAYISIDNG 344

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              + VM  DGS +R++++ ++L +P+W+   R +  + +        ++ ++ 
Sbjct: 345 TTYLKVMNIDGSNDRVVMKGNSLDSPSWAYDSRFVALTGRVGNKNA--IFVVNT 396



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 58/145 (40%), Gaps = 3/145 (2%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  ++  G  I+ LT     I   P F+P+  K+ + +    +  ++Y+ D     +P R
Sbjct: 259 IYAVNARGRVIKKLTNDPS-INVSPTFTPDFSKMVFVSNRGGNP-QIYIKDLSSFDSPVR 316

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +        +P  S +GK+       +    +  +++  +    +     ++ S S++ D
Sbjct: 317 LTFNGKYNSSPAVSPDGKKIAYISIDNGTTYLKVMNIDGSNDRVVMKGNSLD-SPSWAYD 375

Query: 313 SSQIVFESDREGKEQLYVMQSNGSD 337
           S  +        K  ++V+ +   +
Sbjct: 376 SRFVALTGRVGNKNAIFVVNTINGN 400


>gi|255311420|ref|ZP_05353990.1| translocation protein TolB [Chlamydia trachomatis 6276]
 gi|255317721|ref|ZP_05358967.1| translocation protein TolB [Chlamydia trachomatis 6276s]
          Length = 431

 Score =  206 bits (523), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 69/323 (21%), Positives = 130/323 (40%), Gaps = 14/323 (4%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF--VSESVVSGIIKN 191
           K  ++I   +    P+   +  H  +D I+  +T   G  + +I+F   + +  + + + 
Sbjct: 103 KGSQKIFSLELSGDPSKDHQAIHEAADRIHFLLTRVPGISSGKIIFSLCATNSSTELKQG 162

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +D DG ++  LT     +   P +       AY     +  +    ++T    A K
Sbjct: 163 ELWSVDYDGQHLYPLTNEHS-LSVTPTWMHISHIPAYMYVSYKLGVPKIFLNTLNQPAGK 221

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNA---TERLTNTL-FINI 305
           +I   +     P FS   K       +D   D++     L + A    ++L N       
Sbjct: 222 KILAMQGNQFMPTFSPKTKLLAFISDRDGNPDLFVQSFSLATGAIGTPKKLLNEAFGTQG 281

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFT 364
           + S+SPD +++VF S+++G  ++Y MQ +      R+   K  +   P WSP G  IAF 
Sbjct: 282 NPSFSPDGTRLVFVSNKDGTPRIYQMQISPEQHSPRLLTKKYRNSSCPTWSPDGKKIAFC 341

Query: 365 KFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I V     G  E+L     + ++P+W+     L++S        S+L+ + L
Sbjct: 342 SVIKGVRQICVYDLASGRDEQLTTSTEHKESPSWAADSNHLVYSA--GSSNTSELFLLSL 399

Query: 424 -NGRNETLINTPAYASDPQWVGF 445
              ++  ++        P W  F
Sbjct: 400 ITKKSRKIVIGSGEKRFPCWGAF 422


>gi|15835502|ref|NP_297261.1| translocation protein TolB [Chlamydia muridarum Nigg]
 gi|270285685|ref|ZP_06195079.1| translocation protein TolB [Chlamydia muridarum Nigg]
 gi|270289693|ref|ZP_06195995.1| translocation protein TolB [Chlamydia muridarum Weiss]
 gi|301337080|ref|ZP_07225282.1| translocation protein TolB [Chlamydia muridarum MopnTet14]
 gi|14195252|sp|Q9PJE1|TOLB_CHLMU RecName: Full=Protein tolB; Flags: Precursor
 gi|7190916|gb|AAF39683.1| tolB protein, putative [Chlamydia muridarum Nigg]
          Length = 426

 Score =  206 bits (523), Expect = 8e-51,   Method: Composition-based stats.
 Identities = 85/449 (18%), Positives = 169/449 (37%), Gaps = 46/449 (10%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAF---TKFVSIDELGGKVSE 67
           + ++  LCLL +L    +   +   V+  ++     PV+++     K          + +
Sbjct: 1   MFLRSFLCLLCLLPSILYCADLEIHVRAESS---LLPVNVSLLSSPKDTKQGSYLASLRD 57

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           + ++DL   D+     ++     +    S P             +   + K+GK      
Sbjct: 58  LFARDLALGDLLAPT-KEIAPLTVFIEASYPE------------LIFSIKKDGKG----- 99

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF--VSESVV 185
                    ++I   +   +P+   +  H  +D I+  +T   G  + +I+F   S +  
Sbjct: 100 --------AQKIFSLELSGNPSKDHQSIHEAADRIHFLLTHTPGISSGKIIFSLCSTNSS 151

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             + +  L  +D DG ++  LT     +   P +       AY     +  +    ++T 
Sbjct: 152 EELKQGELWSVDYDGQHLAPLTNEHS-LSVTPAWMHISHIPAYIYVSYKLGVPKIFLNTL 210

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNA---TERLTNT 300
                K+I   +     P FS   K       +D   D++     L + A    ++L N 
Sbjct: 211 SQPTGKKILAMQGNQFMPAFSPKTKLLAFISDRDGNPDLFVQSFSLATGAIGTPKKLLNE 270

Query: 301 L-FINISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQG 358
                 + S+SPD +++VF S+++G  ++Y MQ        R+   K  +   P WSP G
Sbjct: 271 AFGTQGNPSFSPDGTRLVFVSNKDGTPRIYQMQIYPEQHPPRLLTKKYRNSSCPTWSPDG 330

Query: 359 DLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             IAF         I V     G  E+L     + ++P+W+     L++S      + S+
Sbjct: 331 KKIAFCSVIKGVRQICVYDLASGRDEQLTTSAEHKESPSWAADSNHLVYSA--GSSSTSE 388

Query: 418 LYSIDL-NGRNETLINTPAYASDPQWVGF 445
           L+ + L   ++  ++        P W  F
Sbjct: 389 LFLLSLITKKSRKIVIGSGEKRFPCWGAF 417


>gi|297748729|gb|ADI51275.1| Tolb [Chlamydia trachomatis D-EC]
 gi|297749609|gb|ADI52287.1| Tolb [Chlamydia trachomatis D-LC]
          Length = 432

 Score =  206 bits (523), Expect = 9e-51,   Method: Composition-based stats.
 Identities = 69/323 (21%), Positives = 130/323 (40%), Gaps = 14/323 (4%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF--VSESVVSGIIKN 191
           K  ++I   +    P+   +  H  +D I+  +T   G  + +I+F   + +  + + + 
Sbjct: 104 KGSQKIFSLELSGDPSKDHQAIHEAADRIHFLLTRVPGISSGKIIFSLCATNSSTELKQG 163

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +D DG ++  LT     +   P +       AY     +  +    ++T    A K
Sbjct: 164 ELWSVDYDGQHLYPLTNEHS-LSVTPTWMHISHIPAYMYVSYKLGVPKIFLNTLNQPAGK 222

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNA---TERLTNTL-FINI 305
           +I   +     P FS   K       +D   D++     L + A    ++L N       
Sbjct: 223 KILAMQGNQFMPTFSPKTKLLAFISDRDGNPDLFVQSFSLATGAIGTPKKLLNEAFGTQG 282

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFT 364
           + S+SPD +++VF S+++G  ++Y MQ +      R+   K  +   P WSP G  IAF 
Sbjct: 283 NPSFSPDGTRLVFVSNKDGTPRIYQMQISPEQHSPRLLTKKYRNSSCPTWSPDGKKIAFC 342

Query: 365 KFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I V     G  E+L     + ++P+W+     L++S        S+L+ + L
Sbjct: 343 SVIKGVRQICVYDLASGRDEQLTTSTEHKESPSWAADSNHLVYSA--GSSNTSELFLLSL 400

Query: 424 -NGRNETLINTPAYASDPQWVGF 445
              ++  ++        P W  F
Sbjct: 401 ITKKSRKIVIGSGEKRFPCWGAF 423


>gi|268326068|emb|CBH39656.1| conserved hypothetical secreted protein, containing WD40-like beta
           propeller repeats [uncultured archaeon]
 gi|268326194|emb|CBH39782.1| conserved hypothetical secreted protein, containing WD40-like beta
           propeller repeats [uncultured archaeon]
          Length = 303

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 74/274 (27%), Positives = 126/274 (45%), Gaps = 12/274 (4%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             RI F S    +    N + VMD DG N+  LT         P + P   K+A+ +  D
Sbjct: 33  TGRIAFTSNMDGN----NEIYVMDADGTNVTRLTNDIAN-DINPEWHPKGCKIAFTSDRD 87

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            D L +YLMD        ++ N         +S NG R   S  +D   +IY +D +   
Sbjct: 88  GD-LEIYLMDVD-GTNITQLTNNTVADGCQCWSPNGSRIAFSSDRDGDPEIYVMDAEGTN 145

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             RLT+   ++I+  +SPD S+I F S R G  ++YVM  NG+++++++ + +       
Sbjct: 146 VTRLTDNTCLDINPHWSPDGSKIAFSSGRVGDTEIYVMDVNGANKEQLTDNNKW-DSPGE 204

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKD 411
           W+   + + F+      F + +M  DG++   L  ++     +P W+  G  ++F   + 
Sbjct: 205 WASDSNKLLFSSDRDGDFEVYLMDADGTKVTQLTNNAEYQEGSPAWALGGEKIVFVAGRY 264

Query: 412 GDTGSKLYSIDLNGRNETLINTP-AYASDPQWVG 444
                ++Y +D +G N T + T  A  SDP W  
Sbjct: 265 -KGDFEIYMMDSDGTNITQMTTNFADESDPVWAP 297


>gi|15605329|ref|NP_220115.1| translocation protein TolB [Chlamydia trachomatis D/UW-3/CX]
 gi|76789337|ref|YP_328423.1| translocation protein TolB [Chlamydia trachomatis A/HAR-13]
 gi|166154813|ref|YP_001654931.1| translocation protein TolB [Chlamydia trachomatis 434/Bu]
 gi|166155688|ref|YP_001653943.1| translocation protein TolB [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|237803027|ref|YP_002888221.1| translocation protein TolB [Chlamydia trachomatis B/Jali20/OT]
 gi|237804948|ref|YP_002889102.1| translocation protein TolB [Chlamydia trachomatis B/TZ1A828/OT]
 gi|301336091|ref|ZP_07224335.1| translocation protein TolB [Chlamydia trachomatis L2tet1]
 gi|6647882|sp|O84604|TOLB_CHLTR RecName: Full=Protein tolB; Flags: Precursor
 gi|119371040|sp|Q3KL97|TOLB_CHLTA RecName: Full=Protein tolB; Flags: Precursor
 gi|226705873|sp|B0B8H3|TOLB_CHLT2 RecName: Full=Protein tolB; Flags: Precursor
 gi|226705874|sp|B0BA52|TOLB_CHLTB RecName: Full=Protein tolB; Flags: Precursor
 gi|3329043|gb|AAC68201.1| component of a macromolecule transport system [Chlamydia
           trachomatis D/UW-3/CX]
 gi|76167867|gb|AAX50875.1| TolB [Chlamydia trachomatis A/HAR-13]
 gi|165930801|emb|CAP04299.1| outer membrane component of membrane transport system [Chlamydia
           trachomatis 434/Bu]
 gi|165931676|emb|CAP07253.1| outer membrane component of membrane transport system [Chlamydia
           trachomatis L2b/UCH-1/proctitis]
 gi|231273248|emb|CAX10163.1| outer membrane component of membrane transport system [Chlamydia
           trachomatis B/TZ1A828/OT]
 gi|231274261|emb|CAX11056.1| outer membrane component of membrane transport system [Chlamydia
           trachomatis B/Jali20/OT]
 gi|296436134|gb|ADH18308.1| translocation protein TolB [Chlamydia trachomatis G/9768]
 gi|296437062|gb|ADH19232.1| translocation protein TolB [Chlamydia trachomatis G/11222]
 gi|296437994|gb|ADH20155.1| translocation protein TolB [Chlamydia trachomatis G/11074]
 gi|297140496|gb|ADH97254.1| translocation protein TolB [Chlamydia trachomatis G/9301]
          Length = 431

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 69/323 (21%), Positives = 130/323 (40%), Gaps = 14/323 (4%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF--VSESVVSGIIKN 191
           K  ++I   +    P+   +  H  +D I+  +T   G  + +I+F   + +  + + + 
Sbjct: 103 KGSQKIFSLELSGDPSKDHQAIHEAADRIHFLLTRVPGISSGKIIFSLCATNSSTELKQG 162

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +D DG ++  LT     +   P +       AY     +  +    ++T    A K
Sbjct: 163 ELWSVDYDGQHLYPLTNEHS-LSVTPTWMHISHIPAYMYVSYKLGVPKIFLNTLNQPAGK 221

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNA---TERLTNTL-FINI 305
           +I   +     P FS   K       +D   D++     L + A    ++L N       
Sbjct: 222 KILAMQGNQFMPTFSPKTKLLAFISDRDGNPDLFVQSFSLATGAIGTPKKLLNEAFGTQG 281

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFT 364
           + S+SPD +++VF S+++G  ++Y MQ +      R+   K  +   P WSP G  IAF 
Sbjct: 282 NPSFSPDGTRLVFVSNKDGTPRIYQMQISPEQHSPRLLTKKYRNSSCPTWSPDGKKIAFC 341

Query: 365 KFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I V     G  E+L     + ++P+W+     L++S        S+L+ + L
Sbjct: 342 SVIKGVRQICVYDLASGRDEQLTTSTEHKESPSWAADSNHLVYSA--GSSNTSELFLLSL 399

Query: 424 -NGRNETLINTPAYASDPQWVGF 445
              ++  ++        P W  F
Sbjct: 400 ITKKSRKIVIGSGEKRFPCWGAF 422


>gi|167470904|ref|ZP_02335608.1| Tol-Pal system beta propeller repeat protein TolB [Yersinia pestis
           FV-1]
          Length = 225

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 52/233 (22%), Positives = 103/233 (44%), Gaps = 14/233 (6%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGK 64
           + +   + +   +L       + + +HA V++       +  P+ +   K++       +
Sbjct: 1   MKQAFRVALGFLVL-------WASVLHAEVRIEITQGVDSARPIGVVPFKWMGPGTPPEE 53

Query: 65  VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           +  +V  DL+ S  FN I      Q+ +    +     W +LG   +V G+V        
Sbjct: 54  IGAIVGADLRNSGKFNPIDAARMPQQPSTAAEV-TPAAWTALGIDAVVVGQVQPSADGSY 112

Query: 125 RVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            V ++L D        +   ++  +    R  AHT+SD++++ +TG KG F +RI +V +
Sbjct: 113 VVSYQLVDTSGSAGSILAQNQYKVTKQWLRYSAHTVSDEVFEKLTGIKGAFRTRIAYVVK 172

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           +   G   + L V D DG N +++     + L  P +SP+  K+AY T++   
Sbjct: 173 TN-GGKFPHELRVSDYDGYN-QFVVHRSPEPLMSPAWSPDGSKIAYVTFESGK 223



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%)

Query: 359 DLIAFT-KFSGEKF--AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDT 414
             IA+  K +G KF   + V   DG  + ++      L +P WSP G  + +   + G +
Sbjct: 165 TRIAYVVKTNGGKFPHELRVSDYDGYNQFVVHRSPEPLMSPAWSPDGSKIAYVTFESGKS 224

Query: 415 G 415
            
Sbjct: 225 A 225


>gi|295841255|dbj|BAJ07029.1| WD40-like beta propeller protein [uncultured bacterium]
          Length = 328

 Score =  205 bits (521), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 68/286 (23%), Positives = 126/286 (44%), Gaps = 25/286 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R+ F S        ++ +  ++ DG  +  LT   ++ L +P +SP+ + +AY   D+E
Sbjct: 52  GRLAFASYRDG----ESEIYSVNADGTALTRLTHDEER-LSKPAWSPDGKSIAYVVTDEE 106

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD----------- 283
             + +YLM       P R+   R +   P +   G   + S  +D  ++           
Sbjct: 107 FNVDIYLMKAD-GSNPARLTTDRWVDTEPAWDPTGGSIVFSSDRDSYLNIEDGKTYEMVY 165

Query: 284 ---IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              IY +D   +    LT++   + + ++SPD  QI F+S R+   ++Y+M ++GS Q  
Sbjct: 166 EFEIYVMDANGSGQTNLTDSPGWDTAPAWSPDGGQIAFQSSRDENPEIYMMDADGSRQVN 225

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSP 399
           ++   E     P WSP G   AF       F I VM+ DG+    L    +    P W+P
Sbjct: 226 LTNHPE-DDAAPAWSPDGSKTAFHSDRTGVFNIYVMETDGTGLVQLTSSPDWDIQPAWAP 284

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVG 444
            G+ + F   ++G+   ++Y ++ +G  +  +     +   P W  
Sbjct: 285 DGQHIAFYSGQEGNF--EIYVMNADGSCQMRLTYHGDFDGFPDWRP 328



 Score =  177 bits (448), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 61/244 (25%), Positives = 101/244 (41%), Gaps = 17/244 (6%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           K  ++     ++  V        + +M  DG+N   LT  R  +  EP + P    + ++
Sbjct: 88  KPAWSPDGKSIAYVVTDEEFNVDIYLMKADGSNPARLTTDR-WVDTEPAWDPTGGSIVFS 146

Query: 230 TYDDEDI-------------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           +  D  +               +Y+MD         + +      AP +S +G +     
Sbjct: 147 SDRDSYLNIEDGKTYEMVYEFEIYVMDANGSGQT-NLTDSPGWDTAPAWSPDGGQIAFQS 205

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +DE  +IY +D   +    LTN    + + ++SPD S+  F SDR G   +YVM+++G+
Sbjct: 206 SRDENPEIYMMDADGSRQVNLTNHPEDDAAPAWSPDGSKTAFHSDRTGVFNIYVMETDGT 265

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAP 395
              +++   +     P W+P G  IAF       F I VM  DGS Q RL         P
Sbjct: 266 GLVQLTSSPDW-DIQPAWAPDGQHIAFYSGQEGNFEIYVMNADGSCQMRLTYHGDFDGFP 324

Query: 396 TWSP 399
            W P
Sbjct: 325 DWRP 328



 Score =  170 bits (431), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 65/243 (26%), Positives = 105/243 (43%), Gaps = 22/243 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S  Q ++A+A+Y D +   +Y ++     A  R+ +    +  P +S +GK     V  
Sbjct: 47  CSNRQGRLAFASYRDGES-EIYSVNAD-GTALTRLTHDEERLSKPAWSPDGKSIAYVVTD 104

Query: 279 DE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK------------ 325
           +E  +DIY +    +   RLT   +++   ++ P    IVF SDR+              
Sbjct: 105 EEFNVDIYLMKADGSNPARLTTDRWVDTEPAWDPTGGSIVFSSDRDSYLNIEDGKTYEMV 164

Query: 326 --EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              ++YVM +NGS Q  ++ D       P WSP G  IAF     E   I +M  DGS++
Sbjct: 165 YEFEIYVMDANGSGQTNLT-DSPGWDTAPAWSPDGGQIAFQSSRDENPEIYMMDADGSRQ 223

Query: 384 RLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQ 441
             L     +  AP WSP G    F   + G     +Y ++ +G     L ++P +   P 
Sbjct: 224 VNLTNHPEDDAAPAWSPDGSKTAFHSDRTG--VFNIYVMETDGTGLVQLTSSPDWDIQPA 281

Query: 442 WVG 444
           W  
Sbjct: 282 WAP 284



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 4/113 (3%)

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NL 392
           + +    +     A   +P  + QG  +AF  +   +  I  +  DG+    L  D   L
Sbjct: 28  STTALPEVGNGTPAEGANPCSNRQGR-LAFASYRDGESEIYSVNADGTALTRLTHDEERL 86

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQWVG 444
             P WSP G+S+ +    D +    +Y +  +G N   + T  +  ++P W  
Sbjct: 87  SKPAWSPDGKSIAYVVT-DEEFNVDIYLMKADGSNPARLTTDRWVDTEPAWDP 138


>gi|255348980|ref|ZP_05380987.1| translocation protein TolB [Chlamydia trachomatis 70]
 gi|255503519|ref|ZP_05381909.1| translocation protein TolB [Chlamydia trachomatis 70s]
 gi|255507197|ref|ZP_05382836.1| translocation protein TolB [Chlamydia trachomatis D(s)2923]
 gi|289525641|emb|CBJ15122.1| outer membrane component of membrane transport system [Chlamydia
           trachomatis Sweden2]
 gi|296435205|gb|ADH17383.1| translocation protein TolB [Chlamydia trachomatis E/150]
 gi|296438924|gb|ADH21077.1| translocation protein TolB [Chlamydia trachomatis E/11023]
          Length = 431

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 69/323 (21%), Positives = 130/323 (40%), Gaps = 14/323 (4%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF--VSESVVSGIIKN 191
           K  ++I   +    P+   +  H  +D I+  +T   G  + +I+F   + +  + + + 
Sbjct: 103 KGSQKIFSLELSGDPSKDHQAIHEAADRIHFLLTRVPGISSGKIIFSLCATNSSTELKQG 162

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +D DG ++  LT     +   P +       AY     +  +    ++T    A K
Sbjct: 163 ELWSVDYDGQHLYPLTNEHS-LSVTPTWMHISHIPAYMYVSYKLGVPKIFLNTLNQPAGK 221

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNA---TERLTNTL-FINI 305
           +I   +     P FS   K       +D   D++     L + A    ++L N       
Sbjct: 222 KILAMQGNQFMPTFSPKTKLLAFISDRDGNPDLFVQSFSLATGAIGTPKKLLNEAFGTQG 281

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFT 364
           + S+SPD +++VF S+++G  ++Y MQ +      R+   K  +   P WSP G  IAF 
Sbjct: 282 NPSFSPDGTRLVFVSNKDGTPRIYQMQISPEQHSPRLLIKKYRNSSCPTWSPDGKKIAFC 341

Query: 365 KFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I V     G  E+L     + ++P+W+     L++S        S+L+ + L
Sbjct: 342 SVIKGVRQICVYDLASGRDEQLTTSTEHKESPSWAADSNHLVYSA--GSSNTSELFLLSL 399

Query: 424 -NGRNETLINTPAYASDPQWVGF 445
              ++  ++        P W  F
Sbjct: 400 ITKKSRKIVIGSGEKRFPCWGAF 422


>gi|62185544|ref|YP_220329.1| translocation protein TolB [Chlamydophila abortus S26/3]
 gi|81312309|sp|Q5L4R3|TOLB_CHLAB RecName: Full=Protein tolB; Flags: Precursor
 gi|62148611|emb|CAH64383.1| putative TolB protein [Chlamydophila abortus S26/3]
          Length = 427

 Score =  204 bits (520), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 70/326 (21%), Positives = 128/326 (39%), Gaps = 14/326 (4%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG--IIK 190
            ++ + +         A  R+  H  +D I+ ++T   G  + +I+F          + +
Sbjct: 103 TQNHQPVHSLMLTEDNALNRQKIHEAADKIHYALTSVPGISSGKIIFSLSKNSQDCELKQ 162

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L  +D DG N+R LT     +   P +     K  Y     +  +    + +  +   
Sbjct: 163 GELWSVDYDGGNLRPLTQENS-LSITPSWMHIGSKKPYLYVSYKFGIPKIFLGSLENTTG 221

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-----NATERLTN-TLFIN 304
           K+I + +     P FS   K            D++               R+ N T    
Sbjct: 222 KKILHLQGNQFMPAFSPRKKLLAFISDAYGNPDLFLQSFSLSQGAMGKPRRILNETFGTQ 281

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAF 363
            + S+SPD S++VF S+++G+ +LY++Q +      R+   K  +   P WSP G  IAF
Sbjct: 282 GNPSFSPDGSKLVFVSNKDGRPRLYILQIDPEMLSPRLLTKKYRNSSCPSWSPDGKKIAF 341

Query: 364 TKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    I V     G   +L     + + P+W+   + L++S    G+  S+LY + 
Sbjct: 342 CSVIKGVRQICVYDLATGKDYQLTTTPVDKEGPSWAVDSQHLVYSAGNTGE--SELYLLS 399

Query: 423 L-NGRNETLINTPAYASDPQWVGFMD 447
           L   + + ++        P W GF D
Sbjct: 400 LITQKTKKIVIGLGEKRFPSWGGFPD 425


>gi|326566623|gb|EGE16765.1| tolB-like protein [Moraxella catarrhalis BC1]
 gi|326576855|gb|EGE26761.1| tolB-like protein [Moraxella catarrhalis O35E]
          Length = 420

 Score =  202 bits (514), Expect = 9e-50,   Method: Composition-based stats.
 Identities = 95/436 (21%), Positives = 170/436 (38%), Gaps = 27/436 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
            K+ L L +        T     + V +     S   +A   F    ++   +S      
Sbjct: 6   TKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLS------ 59

Query: 73  LQRSDVFNLISQDSFKQ-KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           L         +  +  Q   TN D +     W + G + ++  +  +   ++L + + + 
Sbjct: 60  LAGLG----TTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEII 115

Query: 132 DVKDRKQIIGKKFFSS--PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           D  +    +     S   PAS +     ISD IYQ ITG+  D   +I +V ES      
Sbjct: 116 DTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNK 175

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            +SL ++D  G  IR L      I+  P FSP+   +AY+     ++  +Y++       
Sbjct: 176 ISSLKLIDPSGQLIRTLDTVNGSII-TPTFSPDGLSIAYSVQTKNNLPIIYIVSV-SGGT 233

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           PK +  F    LAP FS +G   L S   ++   +IY ++L +N  + LT       + +
Sbjct: 234 PKLVTPFWGHNLAPSFSPDGSSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPN 293

Query: 309 YSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           Y  D+S  ++ +D+  + Q LY      +   +I+        +P  SP G  + +    
Sbjct: 294 YLADASGFIYTADKGTRRQSLYRYDFGTTHSTQIAS----YATNPRLSPDGSKLVYLS-- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G +  I      G  ++         + ++SPSG  +I++  +      +L    L+   
Sbjct: 348 GGQIIIA--NTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKN--QLMIRSLSSNA 403

Query: 428 ETLINTPAYASDPQWV 443
              I T     DP W 
Sbjct: 404 IRTIPTSGTVRDPIWS 419


>gi|168699850|ref|ZP_02732127.1| WD40 domain protein beta Propeller [Gemmata obscuriglobus UQM 2246]
          Length = 294

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 66/267 (24%), Positives = 121/267 (45%), Gaps = 11/267 (4%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  ++       D  + +L           K +L +M   G  ++ L P   +  F+  +
Sbjct: 35  DGSFKQNVQWSPDGKTLLLTRIHEG-----KMALWIMPAAGGEMKRLLPGHTEPHFDGHY 89

Query: 220 SPNQQKVAYATYDDEDILRVYLMDT--RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           SP+  ++ Y     E       +D         + +   ++   +PRFS +GK  L    
Sbjct: 90  SPDGTRIVYVYDKLEGTDGKLRIDVCAADGSDNQTLIPHKAFEESPRFSPDGKTVLWVST 149

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +++  D+Y+V        RLTN    ++  ++SPD  ++ F S R G+++++VM ++G+ 
Sbjct: 150 RNKNPDLYAVTAGGKGERRLTNDPAYDLHPAWSPDGKRVAFASGRSGRQKIHVMSADGTG 209

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPT 396
            ++++ D E     PVW P G+ IAF       + I +M  DG   R L    +   +P 
Sbjct: 210 VQKLT-DGEFLDSWPVWHPDGERIAFASNRSGNYDIWLMTADGKALRNLTGHKAQDTSPA 268

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           W+P G+ L F   + G  GS +Y +D+
Sbjct: 269 WAPDGKKLAFVSTRGG--GSDIYVLDV 293



 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 89/250 (35%), Gaps = 10/250 (4%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N               ++SP+ + +      +  +  +++M        + +       
Sbjct: 26  ENAPVRLTKDGSFKQNVQWSPDGKTLLLTRIHEGKMA-LWIMPAAGGEMKRLLPGHTEPH 84

Query: 261 LAPRFSSNGKRALISVQK----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               +S +G R +    K    D  + I       +  + L        S  +SPD   +
Sbjct: 85  FDGHYSPDGTRIVYVYDKLEGTDGKLRIDVCAADGSDNQTLIPHKAFEESPRFSPDGKTV 144

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           ++ S R     LY + + G  ++R++ D  A    P WSP G  +AF      +  I VM
Sbjct: 145 LWVSTRNKNPDLYAVTAGGKGERRLTND-PAYDLHPAWSPDGKRVAFASGRSGRQKIHVM 203

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTP 434
             DG+  + L +       P W P G  + F+  + G     ++ +  +G+    L    
Sbjct: 204 SADGTGVQKLTDGEFLDSWPVWHPDGERIAFASNRSG--NYDIWLMTADGKALRNLTGHK 261

Query: 435 AYASDPQWVG 444
           A  + P W  
Sbjct: 262 AQDTSPAWAP 271



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 67/148 (45%), Gaps = 11/148 (7%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
              +     R++ +  + D++ + + +      R+ F S        +  + VM  DG  
Sbjct: 158 AVTAGGKGERRLTNDPAYDLHPAWSPDG----KRVAFASGR----SGRQKIHVMSADGTG 209

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           ++ LT   + +   P + P+ +++A+A+    +   ++LM T   +A + +   ++   +
Sbjct: 210 VQKLTDG-EFLDSWPVWHPDGERIAFASNRSGN-YDIWLM-TADGKALRNLTGHKAQDTS 266

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           P ++ +GK+      +    DIY +D++
Sbjct: 267 PAWAPDGKKLAFVSTRGGGSDIYVLDVK 294


>gi|149923449|ref|ZP_01911853.1| tolB protein [Plesiocystis pacifica SIR-1]
 gi|149815701|gb|EDM75228.1| tolB protein [Plesiocystis pacifica SIR-1]
          Length = 432

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 93/409 (22%), Positives = 166/409 (40%), Gaps = 39/409 (9%)

Query: 42  SANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ 101
           S     + +A           GK+ +++ K+ Q S  F +I + S    +       + +
Sbjct: 53  SGQTRLLGVAIP-------ADGKLGDLLRKNAQISAGFEVIPRRSLPGSLVRATGFNK-K 104

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR-KQIIGKKFFSSPASWRKIAHTISD 160
            W+ +G   +V   +  E   ++R+    +++    K ++ K +          A+   +
Sbjct: 105 AWSDIGNVDVVI--LTSEAGSQIRIAM--YELSKGDKPVLSKGY--PAGDPLGAANKFMN 158

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           ++    T E G F SRI FV         KN +  +  +G     +T +R   +  P   
Sbjct: 159 EVINYYTKEPGVFGSRIAFVRTRRNPTTSKN-VYTVQMNGEATSAVTANRSLNIL-PSMG 216

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   +V + +Y   +       D  I   PKR+  +  + L    S +G    +++ KD 
Sbjct: 217 P-GGEVVFTSYAKRNP------DLWISNGPKRVSKYPGLNLGGAVSPDGGTIALALSKDG 269

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             +IY++D   N   RLT    I+   S+S    QI F SDR G  Q+Y M ++G    R
Sbjct: 270 NAEIYTIDRSGNIKNRLTKNPAIDGQPSWS-GGGQIAFVSDRAGGPQVYRMSASGGGASR 328

Query: 341 ISQDKEASYFDPVWSP---QGDLIAFT-KFSGEKFAIGVMK-KDGSQERLLVEDSNLQAP 395
           +++    +   P WS    +G  I ++ + S  ++ I  +  K G   RL         P
Sbjct: 329 VTKQGSYNQ-SPDWSQGAGRGQWIVYSGRDSSNRYDIFKVDVKSGKVVRLTQSPGRNLDP 387

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           T+SP GR + +      + G  +Y  + +G N   +     AS P W  
Sbjct: 388 TFSPDGRWVAY------NQGGSIYVANEDGNNN--VEIAKGASTPDWGP 428


>gi|294056510|ref|YP_003550168.1| WD40 domain protein beta Propeller [Coraliomargarita akajimensis
           DSM 45221]
 gi|293615843|gb|ADE55998.1| WD40 domain protein beta Propeller [Coraliomargarita akajimensis
           DSM 45221]
          Length = 390

 Score =  202 bits (513), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 83/340 (24%), Positives = 143/340 (42%), Gaps = 19/340 (5%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
              +  ++  +G   ++   +        Q   +    S +  +       D + +    
Sbjct: 66  DATIRLKLEPQGGGSIKATIQ----AKGAQP--QIRTVSGSDQQNAVLRACDLVVKWAVK 119

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            +G F  ++ FV         K+ +   +    N++ LT  R  ++  P +SPN +K+ Y
Sbjct: 120 SEGFFAGKLAFV----GKQRGKSEVYSSNLLFGNVKSLTSDR-ALVTGPSWSPNGRKLVY 174

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            TY       +Y+MD    R    I  F+      RFS +G R  +++      +I+  D
Sbjct: 175 TTY-KGGFPDIYMMDFD-QRRRVPIATFKGTNTGARFSPDGSRIAMTLSSTGNSEIWVTD 232

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            Q     RLT    +  S S+SPD  ++VF SD  GK QLY + +NG   +R+  +    
Sbjct: 233 QQGKNGRRLTKNKSLEASPSWSPDGRRLVFTSDSFGKPQLYEISANGGPMRRVPTNVSRY 292

Query: 349 YFDPVWSPQ-GDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
             +P W+PQ G  IAFT   G  F + V   + G   ++     +   P W   GR LIF
Sbjct: 293 CAEPAWNPQKGHQIAFTAAVGGGFQVFVYDSQQGGSTQVTSVAGDAIEPCWLNDGRHLIF 352

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTP--AYASDPQWVG 444
           +++  G    +L  +D   +  + ++TP    AS   +V 
Sbjct: 353 TQRSGGKM--RLMLVDTESKKVSSLHTPNFGDASSASYVY 390


>gi|326567863|gb|EGE17964.1| tolB-like protein [Moraxella catarrhalis 12P80B1]
          Length = 420

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 95/436 (21%), Positives = 170/436 (38%), Gaps = 27/436 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
            K+ L L +        T     + V +     S   +A   F    ++   +S      
Sbjct: 6   TKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLS------ 59

Query: 73  LQRSDVFNLISQDSFKQ-KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           L         +  +  Q   TN D +     W + G + ++  +  +   ++L + + + 
Sbjct: 60  LAGLG----TTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEII 115

Query: 132 DVKDRKQIIGKKFFSS--PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           D  +    +     S   PAS +     ISD IYQ ITG+  D   +I +V ES      
Sbjct: 116 DTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNK 175

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            +SL ++D  G  IR L      I+  P FSP+   +AY+     ++  +Y++       
Sbjct: 176 ISSLKLIDPSGQLIRTLDTVNGSII-TPTFSPDGLSIAYSVQTKNNLPIIYIVSV-SGGT 233

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           PK +  F    LAP FS +G   L S   ++   +IY ++L +N  + LT       + +
Sbjct: 234 PKLVTPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPN 293

Query: 309 YSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           Y  D+S  ++ +D+  + Q LY      +   +I+        +P  SP G  + +    
Sbjct: 294 YLADASGFIYTADKGTRHQSLYRYDFGTTHSTQIAS----YATNPRLSPDGSKLVYLS-- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G +  I      G  ++         + ++SPSG  +I++  +      +L    L+   
Sbjct: 348 GGQIIIA--NTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKN--QLMIRSLSSNA 403

Query: 428 ETLINTPAYASDPQWV 443
              I T     DP W 
Sbjct: 404 IRTIPTSGTVRDPIWS 419


>gi|326560194|gb|EGE10582.1| tolB-like protein [Moraxella catarrhalis 7169]
 gi|326564933|gb|EGE15135.1| tolB-like protein [Moraxella catarrhalis 46P47B1]
 gi|326570295|gb|EGE20340.1| tolB-like protein [Moraxella catarrhalis BC8]
 gi|326575773|gb|EGE25696.1| tolB-like protein [Moraxella catarrhalis CO72]
          Length = 420

 Score =  201 bits (512), Expect = 1e-49,   Method: Composition-based stats.
 Identities = 95/436 (21%), Positives = 170/436 (38%), Gaps = 27/436 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
            K+ L L +        T     + V +     S   +A   F    ++   +S      
Sbjct: 6   TKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLS------ 59

Query: 73  LQRSDVFNLISQDSFKQ-KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           L         +  +  Q   TN D +     W + G + ++  +  +   ++L + + + 
Sbjct: 60  LAGLG----TTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEII 115

Query: 132 DVKDRKQIIGKKFFSS--PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           D  +    +     S   PAS +     ISD IYQ ITG+  D   +I +V ES      
Sbjct: 116 DTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNK 175

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            +SL ++D  G  IR L      I+  P FSP+   +AY+     ++  +Y++       
Sbjct: 176 ISSLKLIDPSGQLIRTLDTVNGSII-TPTFSPDGLSIAYSVQTKNNLPIIYIVSV-SGGT 233

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           PK +  F    LAP FS +G   L S   ++   +IY ++L +N  + LT       + +
Sbjct: 234 PKLVTPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPN 293

Query: 309 YSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           Y  D+S  ++ +D+  + Q LY      +   +I+        +P  SP G  + +    
Sbjct: 294 YLADASGFIYTADKGTRRQSLYRYDFGTTHSTQIAS----YATNPRLSPDGSKLVYLS-- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G +  I      G  ++         + ++SPSG  +I++  +      +L    L+   
Sbjct: 348 GGQIIIA--NTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKN--QLMIRSLSSNA 403

Query: 428 ETLINTPAYASDPQWV 443
              I T     DP W 
Sbjct: 404 IRTIPTSGTVRDPIWS 419


>gi|326559273|gb|EGE09701.1| tolB-like protein [Moraxella catarrhalis 103P14B1]
 gi|326573329|gb|EGE23297.1| tolB-like protein [Moraxella catarrhalis 101P30B1]
          Length = 420

 Score =  200 bits (509), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 95/436 (21%), Positives = 170/436 (38%), Gaps = 27/436 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
            K+ L L +        T     + V +     S   +A   F    ++   +S      
Sbjct: 6   TKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLS------ 59

Query: 73  LQRSDVFNLISQDSFKQ-KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           L         +  +  Q   TN D +     W + G + ++  +  +   ++L + + + 
Sbjct: 60  LAGLG----TTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEII 115

Query: 132 DVKDRKQIIGKKFFSS--PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           D  +    +     S   PAS +     ISD IYQ ITG+  D   +I +V ES      
Sbjct: 116 DTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNK 175

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            +SL ++D  G  IR L      I+  P FSP+   +AY+     ++  +Y++       
Sbjct: 176 ISSLKLIDPSGQLIRTLDTVNGSII-TPTFSPDGLSIAYSVQTKNNLPLIYIVPV-SGGT 233

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           PK +  F    LAP FS +G   L S   ++   +IY ++L +N  + LT       + +
Sbjct: 234 PKLVTPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTLNGAENAPN 293

Query: 309 YSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           Y  D+S  ++ +D+  + Q LY      +   +I+        +P  SP G  + +    
Sbjct: 294 YLADASGFIYTADKGTRRQSLYRYDFGTTHSTQIAS----YATNPRLSPDGSKLVYLS-- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G +  I      G  ++         + ++SPSG  +I++  +      +L    L+   
Sbjct: 348 GGQIIIA--NTKGHIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKN--QLMIRSLSSNA 403

Query: 428 ETLINTPAYASDPQWV 443
              I T     DP W 
Sbjct: 404 IRTIPTSGTVRDPIWS 419



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 360 LIAFTKFSGEKFA----IGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            IA+ + SG        + ++   G   R L   + ++  PT+SP G S+ +S +   + 
Sbjct: 162 KIAYVEESGSPQNKISSLKLIDPSGQLIRTLDTVNGSIITPTFSPDGLSIAYSVQTKNNL 221

Query: 415 GSKLYSIDLNGRNETLINTPAYASD--PQWVG 444
              +Y + ++G    L+ TP +  +  P +  
Sbjct: 222 -PLIYIVPVSGGTPKLV-TPFWGHNLAPSFSP 251


>gi|118574576|sp|Q256H8|TOLB_CHLFF RecName: Full=Protein tolB; Flags: Precursor
          Length = 427

 Score =  200 bits (508), Expect = 5e-49,   Method: Composition-based stats.
 Identities = 66/307 (21%), Positives = 123/307 (40%), Gaps = 14/307 (4%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--IKNSLCVMDRDGANIRYLTPS 209
           R+  H ++D I+ ++T   G  + +I+F            +  L  +D DG N+R LT  
Sbjct: 122 RQKIHEVADKIHYALTRVPGISSGKIVFSLSKNPHDGELKQGELWSVDYDGENLRALTQE 181

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              +   P +        Y     +  +    + +  + + K++ N +     P FS   
Sbjct: 182 NS-LSITPNWLNIGSNNPYFYVSYKFGIPKIFLGSLENTSGKKVLNLQGNQFMPVFSPRK 240

Query: 270 KRALISVQKDEAMDIYS---VDLQS--NATERLTN-TLFINISASYSPDSSQIVFESDRE 323
           K+           D++       Q       R+ N +     + S+SPD S++VF S+++
Sbjct: 241 KQLAFISDAYGNPDLFLQGFSPSQGAMGKPRRVLNESFGTQGNPSFSPDGSKLVFVSNKD 300

Query: 324 GKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GS 381
           G+ +LY++Q +      R+   K  +   P WSP G  IAF         I +     G 
Sbjct: 301 GRPRLYIIQVDPEIQTPRLLTKKYRNSSCPSWSPDGKKIAFCSVIKGVRQICLYDLSTGK 360

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDP 440
             +L     + + P+W+     L++S    G+  S+LY + L   +   ++        P
Sbjct: 361 DYQLTTTPIDKEGPSWAIDSHHLVYSAGNSGE--SELYLLSLITQKTNKIVIGLGEKRFP 418

Query: 441 QWVGFMD 447
            W GF +
Sbjct: 419 SWGGFPN 425


>gi|89897845|ref|YP_514955.1| translocation protein TolB [Chlamydophila felis Fe/C-56]
 gi|89331217|dbj|BAE80810.1| tolB protein precursor [Chlamydophila felis Fe/C-56]
          Length = 437

 Score =  199 bits (507), Expect = 6e-49,   Method: Composition-based stats.
 Identities = 66/307 (21%), Positives = 123/307 (40%), Gaps = 14/307 (4%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--IKNSLCVMDRDGANIRYLTPS 209
           R+  H ++D I+ ++T   G  + +I+F            +  L  +D DG N+R LT  
Sbjct: 132 RQKIHEVADKIHYALTRVPGISSGKIVFSLSKNPHDGELKQGELWSVDYDGENLRALTQE 191

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              +   P +        Y     +  +    + +  + + K++ N +     P FS   
Sbjct: 192 NS-LSITPNWLNIGSNNPYFYVSYKFGIPKIFLGSLENTSGKKVLNLQGNQFMPVFSPRK 250

Query: 270 KRALISVQKDEAMDIYS---VDLQS--NATERLTN-TLFINISASYSPDSSQIVFESDRE 323
           K+           D++       Q       R+ N +     + S+SPD S++VF S+++
Sbjct: 251 KQLAFISDAYGNPDLFLQGFSPSQGAMGKPRRVLNESFGTQGNPSFSPDGSKLVFVSNKD 310

Query: 324 GKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GS 381
           G+ +LY++Q +      R+   K  +   P WSP G  IAF         I +     G 
Sbjct: 311 GRPRLYIIQVDPEIQTPRLLTKKYRNSSCPSWSPDGKKIAFCSVIKGVRQICLYDLSTGK 370

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDP 440
             +L     + + P+W+     L++S    G+  S+LY + L   +   ++        P
Sbjct: 371 DYQLTTTPIDKEGPSWAIDSHHLVYSAGNSGE--SELYLLSLITQKTNKIVIGLGEKRFP 428

Query: 441 QWVGFMD 447
            W GF +
Sbjct: 429 SWGGFPN 435


>gi|296113200|ref|YP_003627138.1| tolB-like protein [Moraxella catarrhalis RH4]
 gi|295920894|gb|ADG61245.1| tolB-like protein [Moraxella catarrhalis RH4]
          Length = 420

 Score =  199 bits (506), Expect = 9e-49,   Method: Composition-based stats.
 Identities = 94/436 (21%), Positives = 170/436 (38%), Gaps = 27/436 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
            K+ L L +        T     + V +     S   +A   F    ++   +S      
Sbjct: 6   TKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLS------ 59

Query: 73  LQRSDVFNLISQDSFKQ-KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           L         +  +  Q   TN D +     W + G + ++  +  +   ++L + + + 
Sbjct: 60  LAGLG----TTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEII 115

Query: 132 DVKDRKQIIGKKFFSS--PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           D  +    +     S   PAS +     ISD IYQ ITG+  D   +I +V ES      
Sbjct: 116 DTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNK 175

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            +SL ++D  G  IR L      I+ +  FSP+   +AY+     ++  +Y++       
Sbjct: 176 ISSLKLIDPSGQLIRTLDTVNGSIITQ-TFSPDGLSIAYSVQTKNNLPIIYIVSV-SGGT 233

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           PK +  F    LAP FS +G   L S   ++   +IY ++L +N  + LT       + +
Sbjct: 234 PKLVTPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPN 293

Query: 309 YSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           Y  D+S  ++ +D+  + Q LY      +   +I+        +P  SP G  + +    
Sbjct: 294 YLADASGFIYTADKGTRRQSLYRYDFATTHSTQIAS----YATNPRLSPDGSKLVYLS-- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G +  I      G  ++         + ++SPSG  +I++  +      +L    L+   
Sbjct: 348 GGQIIIA--NTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKN--QLMIRSLSSNA 403

Query: 428 ETLINTPAYASDPQWV 443
              I T     DP W 
Sbjct: 404 IRTIPTSGTVRDPIWS 419


>gi|46447484|ref|YP_008849.1| translocation protein TolB [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|67461964|sp|Q6MA25|TOLB_PARUW RecName: Full=Protein tolB; Flags: Precursor
 gi|46401125|emb|CAF24574.1| putative TolB protein [Candidatus Protochlamydia amoebophila UWE25]
          Length = 469

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 79/464 (17%), Positives = 182/464 (39%), Gaps = 49/464 (10%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVAT-----NSANYSPVSIAFTKFVSIDELG---GKVSE 67
            +  L+       P   H+  +          ++  P+ +A       +       ++ +
Sbjct: 12  WIQFLICFCLSLAPFFAHSIDEDPIVVRLSTDSSLVPLYLAPFTIEQTNFSPSYLKQLED 71

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF---QDWNSLGAQVLVTGRVIKEGKDRL 124
           +++ DL  +    L  +++   ++ N   +      Q W +     ++ G + +      
Sbjct: 72  ILTFDLNHNGSTYLSKRNASNDQLANAGELEDLGIAQTWQAQNIFYVIKGIIKENF---- 127

Query: 125 RVEFRLWDVKDRKQIIGK----KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
               +++ +    Q + K          +  R++ H I+D I++++ G +G  +++IL+ 
Sbjct: 128 ---LQVFILNTNTQNLKKCDPVMLTGDLSQDRRLIHRIADTIHKALFGVEGVASTKILYT 184

Query: 181 SESVVSGIIKN---SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-----KVAYATYD 232
            ++ +    +     +   D DG N R +T  +      P + P ++        Y +Y 
Sbjct: 185 VKTPLVDNKQKLSSEVWEADYDGENARQITQEKS-FCVNPTYIPPKKGFLSGNFLYVSYQ 243

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQ 290
                ++Y+ + + D   +R+   +   L P  S    +           D++    + +
Sbjct: 244 AGQS-KIYIANLK-DGKGQRLLKLKGNQLMPTLSQQRDKIAFISDATGNPDLFLQLFNPE 301

Query: 291 SN---ATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVM--QSNGSDQKRIS-- 342
           +      +++ +       + S++PD +++ F SD++G  ++YV+     G+  K I   
Sbjct: 302 TGVVGKPQQIFSAKLATQSTPSFNPDGTKVAFVSDKDGSPKIYVIAIPEPGTSLKNIKAT 361

Query: 343 --QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSP 399
               +      P WSP G  IA+   +     I +     +QE+ L +   N + P+W+P
Sbjct: 362 LITKRNRESSAPAWSPDGTKIAYCSRTDGIRQIWIYDFTTNQEKQLTQGPINKENPSWAP 421

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQW 442
           +   L+++     D  S+LY I+LN    T I +       P W
Sbjct: 422 NSLHLVYNSADTND--SQLYLINLNQTEATRITSGKGEKRYPNW 463


>gi|330443987|ref|YP_004376973.1| TolB protein [Chlamydophila pecorum E58]
 gi|328807097|gb|AEB41270.1| TolB protein precursor [Chlamydophila pecorum E58]
          Length = 423

 Score =  199 bits (505), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 69/324 (21%), Positives = 121/324 (37%), Gaps = 14/324 (4%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI--IKNS 192
             + +         +  R+  H  +D ++ ++TG  G  + RI+F            +  
Sbjct: 101 SPQTLHSLTLSQDLSHDRQQIHQAADIVHHALTGIPGISSGRIIFSRSKGGKTQELKQGE 160

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L  +D DG N+  LT     +   P+++       Y     +  +    + +  +   K+
Sbjct: 161 LWAVDYDGGNLVPLTKEAS-LSVTPKWADLSADSPYFYVSYKLGVPKIFLGSLKNTEGKK 219

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS---VDLQS--NATERLTN-TLFINIS 306
             +     L P +S   K            D++               RL N T     S
Sbjct: 220 ALSLTGNQLMPVYSPKKKLLAFIADTYGNPDLFIQAFSPYSGFLGRPRRLLNETFGTQGS 279

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTK 365
            S++P  SQ+VF S+R+G+ +LY+M  +   Q  R+   K  +   P WSP G  IAF  
Sbjct: 280 PSFNPQGSQLVFVSNRDGRPRLYIMNLDPEPQSPRLLTKKYRNCSCPTWSPDGKKIAFCS 339

Query: 366 FSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL- 423
                  I V     G   +L     + + P+W+   R L+FS        S+LY + L 
Sbjct: 340 VIKGTRQICVYDLTSGEGSQLTTSPQDKEGPSWAADSRHLVFSS--GNAEESELYLLSLI 397

Query: 424 NGRNETLINTPAYASDPQWVGFMD 447
             + + ++        P W  F+ 
Sbjct: 398 TKKTKKIVIGSGEKRFPSWGAFLH 421


>gi|326571032|gb|EGE21056.1| tolB-like protein [Moraxella catarrhalis BC7]
          Length = 420

 Score =  198 bits (504), Expect = 1e-48,   Method: Composition-based stats.
 Identities = 94/436 (21%), Positives = 169/436 (38%), Gaps = 27/436 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
            K+ L L +        T     + V +     S   +A   F    ++   +S      
Sbjct: 6   TKVCLALTISFSAALTHTYADDELIVISEQVAPSQYPVAVMPFSEAHQMSHYLS------ 59

Query: 73  LQRSDVFNLISQDSFKQ-KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           L         +  +  Q   TN D +     W + G + ++  +  +   ++L + + + 
Sbjct: 60  LAGLG----TTHQNLPQHTQTNSDILNNLTAWRNRGFEYIILAQSHQILGNKLAINYEII 115

Query: 132 DVKDRKQIIGKKFFSS--PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           D  +    +     S   PAS +     ISD IYQ ITG+  D   +I +V ES      
Sbjct: 116 DTANGLVSVKHTQISDNHPASIQAAYRQISDTIYQIITGQPSDLMGKIAYVEESGSPQNK 175

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            +SL ++D  G  IR L      I+  P FS +   +AY+     ++  +Y++       
Sbjct: 176 ISSLKLIDPSGQLIRTLDTVNGSII-TPTFSSDGLSIAYSVQTKNNLPIIYIVSV-SGGT 233

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           PK +  F    LAP FS +G   L S   ++   +IY ++L +N  + LT       + +
Sbjct: 234 PKLVTPFWGHNLAPSFSPDGGSILFSGSHENNNPNIYRLNLHTNHLDTLTTFNGAENAPN 293

Query: 309 YSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           Y  D+S  ++ +D+  + Q LY      +   +I+        +P  SP G  + +    
Sbjct: 294 YLADASGFIYTADKGARRQSLYRYDFGTTHSTQIAS----YATNPRLSPDGSKLVYLS-- 347

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G +  I      G  ++         + ++SPSG  +I++  +      +L    L+   
Sbjct: 348 GGQIIIA--NTKGRIQQSFRVLGTDVSASFSPSGTRIIYTSNQGNKN--QLMIRSLSSNA 403

Query: 428 ETLINTPAYASDPQWV 443
              I T     DP W 
Sbjct: 404 IRTIPTSGTVRDPIWS 419


>gi|15618691|ref|NP_224977.1| translocation protein TolB [Chlamydophila pneumoniae CWL029]
 gi|15836315|ref|NP_300839.1| translocation protein TolB [Chlamydophila pneumoniae J138]
 gi|16752259|ref|NP_445627.1| translocation protein TolB [Chlamydophila pneumoniae AR39]
 gi|33242141|ref|NP_877082.1| translocation protein TolB [Chlamydophila pneumoniae TW-183]
 gi|6647886|sp|Q9Z7C4|TOLB_CHLPN RecName: Full=Protein tolB; Flags: Precursor
 gi|4377091|gb|AAD18920.1| macromolecule transporter [Chlamydophila pneumoniae CWL029]
 gi|7190004|gb|AAF38861.1| tolB protein, putative [Chlamydophila pneumoniae AR39]
 gi|8979155|dbj|BAA98990.1| macromolecule transporter [Chlamydophila pneumoniae J138]
 gi|33236651|gb|AAP98739.1| TolB precursor [Chlamydophila pneumoniae TW-183]
 gi|269302571|gb|ACZ32671.1| tolB protein-like protein [Chlamydophila pneumoniae LPCoLN]
          Length = 431

 Score =  196 bits (499), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 69/305 (22%), Positives = 118/305 (38%), Gaps = 14/305 (4%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII--KNSLCVMDRDGANIRYLTPS 209
           R+  H  +D ++ ++TG  G    +I+F   S+       +  L   D DG N+  LT  
Sbjct: 121 RQKIHHAADTVHYALTGIPGISAGKIVFALSSLGKDQKLKQGELWTTDYDGKNLAPLTT- 179

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              +   P++        Y     +  +    + +  +   K++   +   L P FS   
Sbjct: 180 ECSLSITPKWVGVGSNFPYLYVSYKYGVPKIFLGSLENTEGKKVLPLKGNQLMPTFSPRK 239

Query: 270 KRALISVQKDEAMDIYS--VDLQSN---ATERLTN-TLFINISASYSPDSSQIVFESDRE 323
           K            D++     L S       RL N       + S++P+ SQ+VF S+++
Sbjct: 240 KLLAFVADTYGNPDLFIQPFSLTSGPMGRPRRLLNENFGTQGNPSFNPEGSQLVFISNKD 299

Query: 324 GKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGS 381
           G+ +LY+M  +      R+   K  +   P WSP G  IAF         I +     G 
Sbjct: 300 GRPRLYIMSLDPEPQAPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICIYDLSSGE 359

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDP 440
             +L    +N ++P+W+   R L+FS        S+LY I L   +   +         P
Sbjct: 360 DYQLTTSPTNKESPSWAIDSRHLVFSA--GNAEESELYLISLVTKKTNKIAIGVGEKRFP 417

Query: 441 QWVGF 445
            W  F
Sbjct: 418 SWGAF 422



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 54/138 (39%), Gaps = 3/138 (2%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V  S   G  +  +  +D +    R LT         P +SP+ +K+A+ +   + + ++
Sbjct: 293 VFISNKDGRPRLYIMSLDPEPQAPRLLTKKYRNSSC-PAWSPDGKKIAFCSV-IKGVRQI 350

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D       + +    +   +P ++ + +  + S    E  ++Y + L +  T ++  
Sbjct: 351 CIYDLSSGEDYQ-LTTSPTNKESPSWAIDSRHLVFSAGNAEESELYLISLVTKKTNKIAI 409

Query: 300 TLFINISASYSPDSSQIV 317
            +      S+     Q +
Sbjct: 410 GVGEKRFPSWGAFPQQPI 427


>gi|297182007|gb|ADI18182.1| periplasmic component of the tol biopolymer transport system
           [uncultured delta proteobacterium HF0200_39N20]
          Length = 428

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 86/440 (19%), Positives = 158/440 (35%), Gaps = 37/440 (8%)

Query: 14  KINLCLLLVLIGGFFPT--SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           K+  CL +V +     T  +  A   +   +  + PV +     +       +V  +   
Sbjct: 15  KLRSCLYIVSVIVLLSTGRNALAIDYIEITNPKFIPVKVGVA--IGAGTEADEVQNIFKA 72

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           +L +   F +I      Q     D+I    D                   + +++   +W
Sbjct: 73  NLDKVLYFQIIPGTK--QVFEESDNIVFHVDLELKK--------------NPVQLNSIIW 116

Query: 132 DVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
               ++ +  K F        R++   +SD   ++     G   SRI +   +      +
Sbjct: 117 SQGKKEALASKTFELEKDQDIRELGLAVSDWFVENTLQFNGVATSRIAY---TAQKTNRR 173

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            ++ +   DG  I+  + +     F   +S + + + Y T+             R+    
Sbjct: 174 KNIMLSSYDGTVIQRFSYNLGSNNFS-SWSFDNKNILYTTFTRSKAQLALQPSIRL--RS 230

Query: 251 KRIGNFRSMI-LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           K +        L   +  +GK  L+++ K    DIYS +L     E L N   +  S   
Sbjct: 231 KILAFPAGSQPLGASWHPDGKSILLTLMKQGNADIYSYNLSDAILESLFNWKSLETSPHM 290

Query: 310 SPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SPD  +I F SD     + Q+Y+        +R++     +   P WSP    +A+ +  
Sbjct: 291 SPDGKKIAFVSDAAYPRRPQIYIHNLATEKTERVTFKGNYN-SSPKWSPDSTQLAYERQK 349

Query: 368 GEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NG 425
              F +        +   L     + + P WSP+G+ +IFS K      SKLY I    G
Sbjct: 350 KNIFQLYKYNLLTRRHVQLTFGRHDFEKPDWSPNGKQIIFSAKM--KKVSKLYYISSFGG 407

Query: 426 RNETLINTPAYASD--PQWV 443
           R   +  +P   S+  P W 
Sbjct: 408 RTIRVTKSPPNISETNPVWS 427



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 61/178 (34%), Gaps = 3/178 (1%)

Query: 270 KRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R   + QK +   +I          +R +  L  N  +S+S D+  I++ +    K QL
Sbjct: 161 SRIAYTAQKTNRRKNIMLSSYDGTVIQRFSYNLGSNNFSSWSFDNKNILYTTFTRSKAQL 220

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +  S     K ++    +      W P G  I  T        I       +    L  
Sbjct: 221 ALQPSIRLRSKILAFPAGSQPLGASWHPDGKSILLTLMKQGNADIYSYNLSDAILESLFN 280

Query: 389 DSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVG 444
             +L+ +P  SP G+ + F          ++Y  +L       +     Y S P+W  
Sbjct: 281 WKSLETSPHMSPDGKKIAFVSDAAYPRRPQIYIHNLATEKTERVTFKGNYNSSPKWSP 338


>gi|34556943|ref|NP_906758.1| translocation protein TolB [Wolinella succinogenes DSM 1740]
 gi|67461991|sp|Q7MA16|TOLB_WOLSU RecName: Full=Protein tolB; Flags: Precursor
 gi|34482658|emb|CAE09658.1| PUTATIVE TONB-INDEPENDENT PROTEIN-UPTAKE PROTEIN [Wolinella
           succinogenes]
          Length = 421

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 89/436 (20%), Positives = 178/436 (40%), Gaps = 34/436 (7%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGG----KVSEV 68
           M+I + L L L   F   ++ A ++V      ++ +     +  S  E+      +V ++
Sbjct: 1   MRILVFLWLGLSSLF---AVDATLEVVK---KFANMPSIIVEDSSTREVERGLTLRVYKM 54

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +  DL+ S  FN+    +     ++ D +  +  +      ++   +  +EG   +  E 
Sbjct: 55  LVGDLKVSSHFNVQEGGA-----SSFDMVMDYGAYRQKKVDLVAKVKAGREGSG-ILAEL 108

Query: 129 RLWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           RL+DV     +  K +  +    +  +AH ++ DI   I     D+ +R  FV  S  + 
Sbjct: 109 RLYDVNSGDSVFAKSYTVAREDRYPFVAHKMAIDINNYIKAPSIDWMNR--FVVLSKYTA 166

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK-VAYATYDDEDILRVYLMDTRI 246
             ++ + V D      + +     ++   P+++  QQ  + Y  Y  +  L  Y + T  
Sbjct: 167 PSESQIVVADYT-LTFQNVIIKDGRLNIFPKWANEQQDAIYYTKYLTKPTLFRYNLYT-- 223

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               ++I     M++A   S++GK+ L+++      DI+  D Q+   ++LT    I++S
Sbjct: 224 -GESRKITESEGMLVASDVSADGKKLLLTMAPHTQSDIFLFDTQTGTRKQLTRYPGIDVS 282

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A +  D  +I+F SDR G   ++    +GS+   + Q       +   S  G  I ++  
Sbjct: 283 AHFIEDERRIMFISDRLGYPNVFATGLDGSET--VEQMVFHGRNNNAASAFGQYIVYSSR 340

Query: 367 SGEK------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                     F + ++       R L  +   Q P +S  G ++++   K     S L  
Sbjct: 341 ESSNEFDTNTFNLYLVSTKSDYIRRLTANGVNQMPRFSQDGETVMYL--KHNGAQSALGV 398

Query: 421 IDLNGRNETLINTPAY 436
           I LN     L   P+ 
Sbjct: 399 IRLNYNKSYLFPLPSG 414


>gi|297181851|gb|ADI18030.1| periplasmic component of the tol biopolymer transport system
           [uncultured delta proteobacterium HF0200_19J16]
          Length = 428

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 82/439 (18%), Positives = 159/439 (36%), Gaps = 33/439 (7%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           +++ +L ++  ++         A   +   +  + PV +     +       +V +V   
Sbjct: 15  HLRSSLYIISGIVLLSTGRIALAIDYIEITNPKFIPVKVGVA--IGAGTEADEVQKVFKA 72

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           +L +   F +I     KQ+    D I    D                   + +++   +W
Sbjct: 73  NLDKVLYFKII--SGTKQEFEESDKIVFHVDLELKN--------------NPVQLNSIIW 116

Query: 132 DVKDRKQIIGKKFF-SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
               ++ +  K F   +    R++   +SD   ++     G   SRI + ++ +     +
Sbjct: 117 SQGKKEAVASKTFKLENERDIRELGLAVSDWFVENTLQFNGVATSRIAYTAQKI---NRR 173

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            ++ +   DG  I+  + +     F   +S + + + Y T+             R+    
Sbjct: 174 KNIMLSSYDGTVIQRFSYNLGSNNFS-SWSFDNKNILYTTFTRSKAQLAIQPSIRLRSKI 232

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                  S  L   +  +GK  L+++ K    DIYS +L     + L N   +  S   S
Sbjct: 233 -LAFPVGSQPLGASWHPDGKSILLTLMKQGNADIYSYNLSDAKLQSLFNWKSLETSPHMS 291

Query: 311 PDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           PD  +I F SD     + Q+Y+        +RI+     +   P WSP    + + +   
Sbjct: 292 PDGKKIAFVSDTAYPRRPQIYIHNLATEKTERITFKGNYN-SSPKWSPDSTKLVYERQKK 350

Query: 369 EKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGR 426
             F +        +   L    +  + P WSP+G+ +IFS K       KLY I    GR
Sbjct: 351 NIFQLYKYNLLTRRHVQLTFGRDDSEKPDWSPNGKQIIFSAKT--KKVPKLYYISSFGGR 408

Query: 427 NETLINTPAYASD--PQWV 443
              +  T    S+  P W 
Sbjct: 409 TIRVTKTLPNISETNPVWS 427



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 63/178 (35%), Gaps = 3/178 (1%)

Query: 270 KRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R   + QK +   +I          +R +  L  N  +S+S D+  I++ +    K QL
Sbjct: 161 SRIAYTAQKINRRKNIMLSSYDGTVIQRFSYNLGSNNFSSWSFDNKNILYTTFTRSKAQL 220

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +  S     K ++    +      W P G  I  T        I       ++ + L  
Sbjct: 221 AIQPSIRLRSKILAFPVGSQPLGASWHPDGKSILLTLMKQGNADIYSYNLSDAKLQSLFN 280

Query: 389 DSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVG 444
             +L+ +P  SP G+ + F          ++Y  +L       I     Y S P+W  
Sbjct: 281 WKSLETSPHMSPDGKKIAFVSDTAYPRRPQIYIHNLATEKTERITFKGNYNSSPKWSP 338


>gi|297171859|gb|ADI22848.1| periplasmic component of the Tol biopolymer transport system
           [uncultured nuHF2 cluster bacterium HF0500_31B05]
          Length = 848

 Score =  192 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 14/273 (5%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            RI F S+          +  M  DG   R+     + +  EP +SP+  ++A+ +    
Sbjct: 43  DRIAFTSDRDGD----FDIYAMSSDGE-ERFQLTRHEAMDGEPDWSPDGLRLAFVSNRAF 97

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +   +Y M+       +R+    ++  +P ++ +G R      +DE ++IYSVD  S AT
Sbjct: 98  NN-EIYTMNGD-GSGVQRMTEHEAVDGSPAWAPDGSRIAFVSDRDENLEIYSVDTASGAT 155

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            RLTN    ++  ++SPD  Q++F S R G  ++Y   ++G +   +S   EA+   P W
Sbjct: 156 TRLTNHEADDLEPAWSPDGRQLLFVSSRSGNAEIYAADADGGNPVNVST-HEATDGSPSW 214

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSNLQA--PTWSPSGRSLIFSRKK 410
           SP G  IA+T        + +M       +   L  DS      P+WSP    L F   +
Sbjct: 215 SPDGTTIAYTSDRDGNSDLYLMSAHAPEIEPVNLTYDSAFDGFTPSWSPDSEQLTFVSNR 274

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            G+   ++YS+ +  + +  +     A  P W 
Sbjct: 275 SGNNDFEIYSMFV--QPQRFLEELDQAGFPAWS 305



 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 64/272 (23%), Positives = 115/272 (42%), Gaps = 12/272 (4%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+ FVS         N +  M+ DG+ ++ +T   + +   P ++P+  ++A+ +  DE+
Sbjct: 88  RLAFVSNR----AFNNEIYTMNGDGSGVQRMTE-HEAVDGSPAWAPDGSRIAFVSDRDEN 142

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            L +Y +DT    A  R+ N  +  L P +S +G++ L    +    +IY+ D       
Sbjct: 143 -LEIYSVDTASG-ATTRLTNHEADDLEPAWSPDGRQLLFVSSRSGNAEIYAADADGGNPV 200

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--ISQDKEASYFDPV 353
            ++     + S S+SPD + I + SDR+G   LY+M ++  + +   ++ D     F P 
Sbjct: 201 NVSTHEATDGSPSWSPDGTTIAYTSDRDGNSDLYLMSAHAPEIEPVNLTYDSAFDGFTPS 260

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           WSP  + + F           +       +R L E      P WS +G  L       G 
Sbjct: 261 WSPDSEQLTFVSNRSGNNDFEIYSMFVQPQRFLEELDQAGFPAWSRNGNRLAVVA--QGA 318

Query: 414 TGSKLYSIDLNG-RNETLINTPAYASDPQWVG 444
               ++  D +G   + L    A    P W  
Sbjct: 319 VNKDIFVSDADGIEIDNLTTDAANERFPAWSP 350



 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 99/226 (43%), Gaps = 10/226 (4%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            ++A+ +  D D   +Y M +       ++    +M   P +S +G R      +    +
Sbjct: 43  DRIAFTSDRDGD-FDIYAMSSD-GEERFQLTRHEAMDGEPDWSPDGLRLAFVSNRAFNNE 100

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           IY+++   +  +R+T    ++ S +++PD S+I F SDR+   ++Y + +      R++ 
Sbjct: 101 IYTMNGDGSGVQRMTEHEAVDGSPAWAPDGSRIAFVSDRDENLEIYSVDTASGATTRLT- 159

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGR 402
           + EA   +P WSP G  + F         I     DG     +   ++   +P+WSP G 
Sbjct: 160 NHEADDLEPAWSPDGRQLLFVSSRSGNAEIYAADADGGNPVNVSTHEATDGSPSWSPDGT 219

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD----PQWVG 444
           ++ ++  +DG   S LY +  +      +N    ++     P W  
Sbjct: 220 TIAYTSDRDG--NSDLYLMSAHAPEIEPVNLTYDSAFDGFTPSWSP 263



 Score =  163 bits (412), Expect = 5e-38,   Method: Composition-based stats.
 Identities = 59/278 (21%), Positives = 110/278 (39%), Gaps = 22/278 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTP-------------SRDQILFEPRFSPNQQKVAYATY 231
            S      + V DRDG +  Y+               +  Q   +P +SP+ +++A+ + 
Sbjct: 437 WSPDGDRLVFVSDRDGNDEIYILTLADTTDTSLLRLTNNTQRDGDPTWSPDAKEIAFTSD 496

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D  +    L          R+      +  P +S N  R      +    +IYS+D   
Sbjct: 497 RDGGVDLYTLRADAASSEAIRLTE-DGSVDDPVWSPNATRIAFVSDRTGDREIYSIDADG 555

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                L++    + + ++ PD S + F S+R+G+  LY M+ +G +  R++++++     
Sbjct: 556 GTAVNLSDHPGEDYAPTWFPDGSLLAFVSNRDGQPDLYRMERDGDEVTRLTENEDEED-A 614

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKK 410
           P WSP G  + +   S     I ++   G   R + +       PTWS SG  + +   +
Sbjct: 615 PSWSPSGLQLVYASGSSGNLNIQLIGSQGLVPRRVTDHPGADVCPTWSSSGDRIAYMSNR 674

Query: 411 DGDTGSKLYSIDLNG---RNETLINTP-AYASDPQWVG 444
           DG    ++Y    +        L + P A    P W  
Sbjct: 675 DG--NYEIYVSKQDSLELAPTNLTSAPAADDRYPAWAP 710



 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 61/258 (23%), Positives = 110/258 (42%), Gaps = 10/258 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +  D A+   +  + D  + +P +SPN  ++A+ +    D   +Y +D     A  
Sbjct: 502 DLYTLRADAASSEAIRLTEDGSVDDPVWSPNATRIAFVSDRTGD-REIYSIDADGGTAV- 559

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            + +      AP +  +G        +D   D+Y ++   +   RLT       + S+SP
Sbjct: 560 NLSDHPGEDYAPTWFPDGSLLAFVSNRDGQPDLYRMERDGDEVTRLTENEDEEDAPSWSP 619

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              Q+V+ S   G   + ++ S G   +R++ D   +   P WS  GD IA+       +
Sbjct: 620 SGLQLVYASGSSGNLNIQLIGSQGLVPRRVT-DHPGADVCPTWSSSGDRIAYMSNRDGNY 678

Query: 372 AIGVMKKDGSQ--ERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            I V K+D  +     L     ++ + P W+PS   L+F   +DG   +++Y +D NG N
Sbjct: 679 EIYVSKQDSLELAPTNLTSAPAADDRYPAWAPSRGELLFVSNRDG--NNEIYLMDANGSN 736

Query: 428 E-TLINTPAYASDPQWVG 444
              L + P+      W  
Sbjct: 737 LVRLTDNPSEDLFATWSP 754



 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 58/291 (19%), Positives = 101/291 (34%), Gaps = 16/291 (5%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  +   T      + ++ FVS    +   +     +       +      DQ  F P +
Sbjct: 251 DSAFDGFTPSWSPDSEQLTFVSNRSGNNDFEIYSMFVQ-----PQRFLEELDQAGF-PAW 304

Query: 220 SPNQQKVAYATYD--DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           S N  ++A       ++DI         ID     +    +    P +S +      +  
Sbjct: 305 SRNGNRLAVVAQGAVNKDIFVSDADGIEIDN----LTTDAANERFPAWSPDASAIAFTSD 360

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D   +IY +         L      +    +SP+ S I F +DR+G E++Y+++S   +
Sbjct: 361 RDGNDEIYLMSPDGMVPFELITDAANDFDPVWSPNESTIGFVTDRDGNEEIYLVRSGAEE 420

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK----DGSQERLLVEDSNLQ 393
           +     +  A+  D  WSP GD + F         I ++      D S  RL        
Sbjct: 421 EAINLTENAANDRDFAWSPDGDRLVFVSDRDGNDEIYILTLADTTDTSLLRLTNNTQRDG 480

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            PTWSP  + + F+  +DG         D        +       DP W  
Sbjct: 481 DPTWSPDAKEIAFTSDRDGGVDLYTLRADAASSEAIRLTEDGSVDDPVWSP 531



 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 101/253 (39%), Gaps = 12/253 (4%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +RI FVS+          +  +D DG     L+       + P + P+   +A+ +  D
Sbjct: 533 ATRIAFVSDRTGD----REIYSIDADGGTAVNLSD-HPGEDYAPTWFPDGSLLAFVSNRD 587

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                  +   R      R+        AP +S +G + + +      ++I  +  Q   
Sbjct: 588 GQPDLYRME--RDGDEVTRLTENEDEEDAPSWSPSGLQLVYASGSSGNLNIQLIGSQGLV 645

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--QKRISQDKEASYFD 351
             R+T+    ++  ++S    +I + S+R+G  ++YV + +  +     ++    A    
Sbjct: 646 PRRVTDHPGADVCPTWSSSGDRIAYMSNRDGNYEIYVSKQDSLELAPTNLTSAPAADDRY 705

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKK 410
           P W+P    + F         I +M  +GS    L ++ +     TWSP G  ++F+  +
Sbjct: 706 PAWAPSRGELLFVSNRDGNNEIYLMDANGSNLVRLTDNPSEDLFATWSPDGSQVVFASDR 765

Query: 411 DGDTGSKLYSIDL 423
            G     LY ++L
Sbjct: 766 GGRF--DLYGMEL 776



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 15/234 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S +  V  S  SG +   L  +   G   R +T      +  P +S +  ++AY +  D 
Sbjct: 620 SGLQLVYASGSSGNLNIQL--IGSQGLVPRRVTDHPGADVC-PTWSSSGDRIAYMSNRDG 676

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +          ++ AP  + +  +     P ++ +    L    +D   +IY +D   + 
Sbjct: 677 NYEIYVSKQDSLELAPTNLTSAPAADDRYPAWAPSRGELLFVSNRDGNNEIYLMDANGSN 736

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM--------QSNGSDQKRISQDK 345
             RLT+    ++ A++SPD SQ+VF SDR G+  LY M             +Q+R++   
Sbjct: 737 LVRLTDNPSEDLFATWSPDGSQVVFASDRGGRFDLYGMELVRDDQDNVTVVNQRRLTDFG 796

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            +S     W      I F         I +  +D + ERL        +PTWSP
Sbjct: 797 ISSTSSISWYSV-RDIVFASDRDGTSRIYL--RDITPERLTSSSGFDWSPTWSP 847



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 41/96 (42%), Gaps = 10/96 (10%)

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           D IAFT      F I  M  DG +   L   ++    P WSP G  L F   +     ++
Sbjct: 43  DRIAFTSDRDGDFDIYAMSSDGEERFQLTRHEAMDGEPDWSPDGLRLAFVSNRA--FNNE 100

Query: 418 LYSIDLNGRNETLIN-------TPAYASDPQWVGFM 446
           +Y+++ +G     +        +PA+A D   + F+
Sbjct: 101 IYTMNGDGSGVQRMTEHEAVDGSPAWAPDGSRIAFV 136


>gi|108763053|ref|YP_628620.1| beta-propeller repeat-containing to-pal system protein TolB
           [Myxococcus xanthus DK 1622]
 gi|108466933|gb|ABF92118.1| tol-pal system beta propeller repeat protein TolB [Myxococcus
           xanthus DK 1622]
          Length = 366

 Score =  191 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 60/272 (22%), Positives = 110/272 (40%), Gaps = 9/272 (3%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            +L ++ +   G+ +  + V+  DG +                ++P+   +  A  D E 
Sbjct: 95  SLLVITATEEGGLHRQQMRVLPLDGKSPAVPLHPPRARARNASWAPDGTWLV-AESDAEG 153

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              V  ++ R      R+         P  S +GK       ++   ++Y  +   +   
Sbjct: 154 FSDVVRLEPREGGPEVRLTQVPQGCFEPAVSPDGKEVAFVCSREGDPEVYVANADGSGER 213

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVW 354
           RLT     + +  +SPD   +V  SDRE K++LY ++ +GSD + +S +  E    +  W
Sbjct: 214 RLTFFHHEDRTPKWSPDGKWLVIVSDRERKDRLYFLRPDGSDLRAVSGESFEGDEREAAW 273

Query: 355 SPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG 412
           SP G  + +          I ++   G     L +       P WSP G+ L F  ++ G
Sbjct: 274 SPDGQRLVYVSRLPDGNARIWMVAVAGGAPVALTDGKHRDDMPAWSPDGKYLAFVSERQG 333

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           DT   +Y +  +G  +T + T   A  P W+ 
Sbjct: 334 DT--DVYVMRADGSGQTRLTT---AKGPDWLP 360



 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 107/273 (39%), Gaps = 18/273 (6%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV-AYATYDDEDILRVYLMDTRI 246
             +  +  +  DG   + LT   +     P  SP+ + +      ++  + R  +    +
Sbjct: 60  AGQKDVWKVSPDGVETQ-LTRGEEDEYPGP-LSPDGKSLLVITATEEGGLHRQQMRVLPL 117

Query: 247 DRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFI 303
           D     +        A    ++ +G   +     +   D+  +   +     RLT     
Sbjct: 118 DGKSPAVPLHPPRARARNASWAPDGTWLVAESDAEGFSDVVRLEPREGGPEVRLTQVPQG 177

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               + SPD  ++ F   REG  ++YV  ++GS ++R++         P WSP G  +  
Sbjct: 178 CFEPAVSPDGKEVAFVCSREGDPEVYVANADGSGERRLTFFH-HEDRTPKWSPDGKWLVI 236

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                 K  +  ++ DGS  R +  +    + +   WSP G+ L++  +   D  ++++ 
Sbjct: 237 VSDRERKDRLYFLRPDGSDLRAVSGESFEGDEREAAWSPDGQRLVYVSRLP-DGNARIWM 295

Query: 421 IDLNGR-------NETLINTPAYASDPQWVGFM 446
           + + G         +   + PA++ D +++ F+
Sbjct: 296 VAVAGGAPVALTDGKHRDDMPAWSPDGKYLAFV 328



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 55/124 (44%), Gaps = 2/124 (1%)

Query: 189 IKNSLCVMDRDGANIRYLT-PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
            K+ L  +  DG+++R ++  S +    E  +SP+ Q++ Y +   +   R++++     
Sbjct: 242 RKDRLYFLRPDGSDLRAVSGESFEGDEREAAWSPDGQRLVYVSRLPDGNARIWMVAV-AG 300

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            AP  + + +     P +S +GK      ++    D+Y +    +   RLT     +   
Sbjct: 301 GAPVALTDGKHRDDMPAWSPDGKYLAFVSERQGDTDVYVMRADGSGQTRLTTAKGPDWLP 360

Query: 308 SYSP 311
            ++P
Sbjct: 361 RWAP 364



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 74/227 (32%), Gaps = 58/227 (25%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNT------------------------------- 300
            +   ++    D++ V        +LT                                 
Sbjct: 53  VIFLSERAGQKDVWKVSPD-GVETQLTRGEEDEYPGPLSPDGKSLLVITATEEGGLHRQQ 111

Query: 301 ------------------LFINISASYSPDSSQIVFESDREGKEQLYVM-QSNGSDQKRI 341
                                  +AS++PD + +V ESD EG   +  +    G  + R+
Sbjct: 112 MRVLPLDGKSPAVPLHPPRARARNASWAPDGTWLVAESDAEGFSDVVRLEPREGGPEVRL 171

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPS 400
           +Q  +   F+P  SP G  +AF         + V   DGS ER L    +  + P WSP 
Sbjct: 172 TQVPQG-CFEPAVSPDGKEVAFVCSREGDPEVYVANADGSGERRLTFFHHEDRTPKWSPD 230

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT---PAYASDPQWVG 444
           G+ L+    +  +   +LY +  +G +   ++         +  W  
Sbjct: 231 GKWLVIVSDR--ERKDRLYFLRPDGSDLRAVSGESFEGDEREAAWSP 275


>gi|282890326|ref|ZP_06298854.1| hypothetical protein pah_c016o029 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499708|gb|EFB41999.1| hypothetical protein pah_c016o029 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 459

 Score =  190 bits (482), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 79/409 (19%), Positives = 157/409 (38%), Gaps = 37/409 (9%)

Query: 63  GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
            K++ ++  DL  + +  + S +     +T        + W +L  Q ++   + ++   
Sbjct: 61  KKLTSILQFDLNHNGMTYVCSSEKKWNALTKNPLQFTEEQWQNLPFQGIIKLFLNQQ--- 117

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF--- 179
            L  E  L D    K+  G     +    RK+ H I+D +Y+++  + G   SR+L+   
Sbjct: 118 YLSGEIALKDSHAIKRFEGLALSGNLNDDRKVMHQIADTLYKALFHQPGIATSRVLYTVK 177

Query: 180 -VSESVVSGIIKNSLCVMDRDGANIRYLTPSR--------DQILFEPRFSPNQQKVAYAT 230
               S       + +   D DG N R LT  +          I  +P FS +   + Y +
Sbjct: 178 TPDRSTQEKKWISEIWEADYDGYNPRKLTTHKTVGYCVTPSYIPAKPGFS-SGSMI-YTS 235

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-- 288
           Y +    ++Y+         +R+   R   L P  S    +           D++     
Sbjct: 236 YKNGQP-KIYVAQVNEG-IGRRLNYVRGNQLMPTVSPQRDQIAFICDVGGNPDLFIQPFS 293

Query: 289 ---LQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD------- 337
                     ++ +    +  + ++SPD  +I F S+++G  ++Y++     +       
Sbjct: 294 IEKGAEGKPRQIFSCGQSVQGTPTFSPDGKKIAFASNKDGSPRVYILDIPKENVLLKDIK 353

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPT 396
            K I++    S   P WSP G  IA++  +     I V      +E+ +     + + P+
Sbjct: 354 PKLITKYSRES-TAPSWSPDGTKIAYSSLTQGTRQIWVYDLRKQEEKQITFGSGHKENPS 412

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
           WSP+ + LI+         + LY + L N +   +  +      P W G
Sbjct: 413 WSPNSKMLIY--NCTDSQSNCLYLVGLQNSKPTKVGASEGEKHYPSWGG 459


>gi|171321510|ref|ZP_02910451.1| translocation protein TolB [Burkholderia ambifaria MEX-5]
 gi|171093218|gb|EDT38425.1| translocation protein TolB [Burkholderia ambifaria MEX-5]
          Length = 219

 Score =  189 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 88/217 (40%), Gaps = 5/217 (2%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           +     VY+ D    R    + + +    AP +S +     +++       IY+V+    
Sbjct: 4   ERKKPIVYIHDLPTGRRY-MVSDQKGNNSAPAWSPDSNTLAVALSLTGNTQIYTVNANGG 62

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASY 349
              RLT +  I+    YSPD   I F SDR G  Q+Y M + G      +R++     + 
Sbjct: 63  GLRRLTQSSSIDTEPYYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYN- 121

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             P  SP G L+A+   +G  F + V          +   +  ++P+++ +G+ L+++ +
Sbjct: 122 TSPRISPDGKLLAYISRTGGGFKLYVQDLQTGAANAITNTNRDESPSFAANGQYLLYATQ 181

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
             G         D +   + L        +P W  FM
Sbjct: 182 SGGRNVLAAVPSDGSAPPQILSVQGGSVREPSWGPFM 218



 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 81/201 (40%), Gaps = 9/201 (4%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           RY+   +      P +SP+   +A A     +  ++Y ++       +R+    S+   P
Sbjct: 20  RYMVSDQKGNNSAPAWSPDSNTLAVALSLTGNT-QIYTVNANGGGL-RRLTQSSSIDTEP 77

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS---NATERLTNTLFINISASYSPDSSQIVFES 320
            +S +G+    +  +  A  IY +  Q     A +R+T T   N S   SPD   + + S
Sbjct: 78  YYSPDGRWIYFTSDRGGAPQIYRMPAQGESAGAAQRVTFTGSYNTSPRISPDGKLLAYIS 137

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              G  +LYV          I+         P ++  G  + +   SG +  +  +  DG
Sbjct: 138 RTGGGFKLYVQDLQTGAANAITNTNR--DESPSFAANGQYLLYATQSGGRNVLAAVPSDG 195

Query: 381 SQERLL--VEDSNLQAPTWSP 399
           S    +  V+  +++ P+W P
Sbjct: 196 SAPPQILSVQGGSVREPSWGP 216



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 5/171 (2%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM--DTR 245
                +  ++ +G  +R LT S   I  EP +SP+ + + + + D     ++Y M     
Sbjct: 49  TGNTQIYTVNANGGGLRRLTQSSS-IDTEPYYSPDGRWIYFTS-DRGGAPQIYRMPAQGE 106

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              A +R+    S   +PR S +GK      +      +Y  DLQ+ A   +TNT   + 
Sbjct: 107 SAGAAQRVTFTGSYNTSPRISPDGKLLAYISRTGGGFKLYVQDLQTGAANAITNTN-RDE 165

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           S S++ +   +++ +   G+  L  + S+GS   +I   +  S  +P W P
Sbjct: 166 SPSFAANGQYLLYATQSGGRNVLAAVPSDGSAPPQILSVQGGSVREPSWGP 216



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
              ++    R++  + S D     + + G +   I F S+   +  I       +  GA 
Sbjct: 56  TVNANGGGLRRLTQSSSIDTEPYYSPD-GRW---IYFTSDRGGAPQIYRMPAQGESAGAA 111

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R            PR SP+ + +AY +       ++Y+ D +   A       R    +
Sbjct: 112 QRVTFTGS--YNTSPRISPDGKLLAYIS-RTGGGFKLYVQDLQTGAANAITNTNR--DES 166

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSP 311
           P F++NG+  L + Q      + +V    +A  ++ +    ++   S+ P
Sbjct: 167 PSFAANGQYLLYATQSGGRNVLAAVPSDGSAPPQILSVQGGSVREPSWGP 216


>gi|148977419|ref|ZP_01814019.1| translocation protein TolB precursor [Vibrionales bacterium SWAT-3]
 gi|145963371|gb|EDK28636.1| translocation protein TolB precursor [Vibrionales bacterium SWAT-3]
          Length = 246

 Score =  189 bits (480), Expect = 8e-46,   Method: Composition-based stats.
 Identities = 56/227 (24%), Positives = 94/227 (41%), Gaps = 25/227 (11%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M   L L  V +        HA +++       +  P++I   ++   + L   VS V++
Sbjct: 1   MLKKLLLSFVFVIATSSQFAHAALELVITDGINSARPIAIVPFRWEGAEPLPHDVSAVIA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DLQRS  F+ ++     Q   +   +  F  W +LG   L+TG + K  + +  V ++L
Sbjct: 61  SDLQRSGKFSPVATSKMPQTPYSETEV-NFDAWTNLGVDSLLTGSITKNAEGQYVVNYQL 119

Query: 131 WDVKDRK---------------------QIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            D+   +                      +  KK        R+ AH ISD +Y+ +TGE
Sbjct: 120 IDIVRGQLTKGQSRALSDEGQLVLSKDHVLFNKKATVPGNRLREYAHRISDLVYEELTGE 179

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           KG F +RI +V  +         L V D DG N R +  S+  +  +
Sbjct: 180 KGAFLTRISYVVVN-DKDKYPYQLRVADYDGFNERLVLRSKQPLCLQ 225


>gi|260062320|ref|YP_003195400.1| tolB protein [Robiginitalea biformata HTCC2501]
 gi|88783882|gb|EAR15053.1| tolB protein [Robiginitalea biformata HTCC2501]
          Length = 303

 Score =  187 bits (476), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 71/282 (25%), Positives = 125/282 (44%), Gaps = 21/282 (7%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            + +I FV++   +      + +MD DGAN   LT   D + F P +S +   +++ +  
Sbjct: 31  GSGKIAFVTDRDGNP----EVYIMDGDGANPENLTR-HDSLDFSPSWSADGTSLSFYSKR 85

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQS 291
           D +   +Y MD +  R   R+ N  +  + P  S +G + L    +D  + ++Y +D   
Sbjct: 86  DGNA-EIYRMDLQT-RQLTRLTNHPATDVLPVPSPDGSQILFMSDRDSLSRNVYVMDKDG 143

Query: 292 NATERLTNTLFINISASYSPDSSQIVFE------SDRE--GKEQLYVMQSNGSDQKRISQ 343
           +   +LT       S  +SPD SQI F       SD    G  ++++M + G   KR++ 
Sbjct: 144 SGIRQLTRNAAYEESPEWSPDGSQIAFTRQLRDSSDTSHAGNGEIFLMDAQGGGVKRLT- 202

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGR 402
           DKE       +SP G  IAF     +++ +  +  DG+  + L  D+    +P WSP G 
Sbjct: 203 DKEGYDSGAKFSPDGSKIAFYGAQEDQWDLYTINADGTGLQNLTNDAIECYSPDWSPDGE 262

Query: 403 SLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWV 443
            L+++    G     ++ I++       L  T      P W 
Sbjct: 263 WLVYTAGSKG--NYNIWKINIRTKERVRLTRTSGRNEAPSWG 302



 Score =  166 bits (420), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 67/245 (27%), Positives = 110/245 (44%), Gaps = 21/245 (8%)

Query: 216 EPRFSPNQ-----QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +P  S +Q      K+A+ T  D +   VY+MD      P+ +    S+  +P +S++G 
Sbjct: 20  KPGVSADQAETGSGKIAFVTDRDGNP-EVYIMDGD-GANPENLTRHDSLDFSPSWSADGT 77

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLY 329
                 ++D   +IY +DLQ+    RLTN    ++    SPD SQI+F SDR+     +Y
Sbjct: 78  SLSFYSKRDGNAEIYRMDLQTRQLTRLTNHPATDVLPVPSPDGSQILFMSDRDSLSRNVY 137

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGS 381
           VM  +GS  ++++++  A    P WSP G  IAFT+               I +M   G 
Sbjct: 138 VMDKDGSGIRQLTRNA-AYEESPEWSPDGSQIAFTRQLRDSSDTSHAGNGEIFLMDAQGG 196

Query: 382 QERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASD 439
             + L + +       +SP G  + F   ++      LY+I+ +G   + L N       
Sbjct: 197 GVKRLTDKEGYDSGAKFSPDGSKIAFYGAQEDQW--DLYTINADGTGLQNLTNDAIECYS 254

Query: 440 PQWVG 444
           P W  
Sbjct: 255 PDWSP 259


>gi|32265933|ref|NP_859965.1| translocation protein TolB [Helicobacter hepaticus ATCC 51449]
 gi|67461999|sp|Q7VJ16|TOLB_HELHP RecName: Full=Protein tolB; Flags: Precursor
 gi|32261982|gb|AAP77031.1| Acetyl esterase TolB [Helicobacter hepaticus ATCC 51449]
          Length = 419

 Score =  187 bits (475), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 73/402 (18%), Positives = 162/402 (40%), Gaps = 30/402 (7%)

Query: 34  AFVKVATNSANYSPVS-IAFTKFVSID-ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKI 91
           A +++     N + +  I   +  S + + G KV ++++ DL+ S  F +          
Sbjct: 20  ATLEIVK---NTNKIPYIVVERLDSENADFGAKVLKMLAADLKVSGHFQVYDGS------ 70

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP-AS 150
            N +S   ++D+      +L   +V K   + L     L+D+   K+I  K +  +    
Sbjct: 71  VNKNSEVAYKDYADKKIDLLAQIKVSKSS-NSLTGTISLYDINTSKRIYVKDYTENDVKR 129

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           +  IAH +  D+   I     ++  R++ +S+   SG   + + + D      + +    
Sbjct: 130 FPFIAHRMCIDVNSYIQAPSIEWMQRLVVLSQYTTSGN--SEILIADYTLTYQKVVVKG- 186

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             +   P++  ++Q+  Y T    D+  +   +       + +G+   + +    S NG+
Sbjct: 187 -GLNIFPKWVDSKQESIYYTKYL-DVPTILKHNLTTGHIEQLVGS-EGIAVVSDVSKNGE 243

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             ++S+      D+Y  + +S    RLTN   I++   +  +  +I+F SDR G   +++
Sbjct: 244 NLILSLSPTALSDLYLYNTKSKNLRRLTNYSGIDVDGKFVNNEKEIIFVSDRLGYPNIFM 303

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKD-GSQE 383
           M+ +G   +++      +      +  G    +T            F + ++    GS  
Sbjct: 304 MRLDGGGTEQVVLHGRNN---SAVTSNGKYAVYTSRETNNEFGANTFNLYLISLAPGSNY 360

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            R L      Q P +S  G ++++ +     +   +  ID N
Sbjct: 361 IRRLTASGKNQMPKYSNDGGTIMYLKYYKAQSALGIIRIDYN 402


>gi|224418200|ref|ZP_03656206.1| translocation protein TolB [Helicobacter canadensis MIT 98-5491]
 gi|253827527|ref|ZP_04870412.1| translocation protein TolB precursor [Helicobacter canadensis MIT
           98-5491]
 gi|253510933|gb|EES89592.1| translocation protein TolB precursor [Helicobacter canadensis MIT
           98-5491]
          Length = 426

 Score =  185 bits (471), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 85/431 (19%), Positives = 180/431 (41%), Gaps = 33/431 (7%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSEVV 69
           KI    L+ L   F   +I A ++V     N   +     ++   D    E   KV +++
Sbjct: 3   KICFLFLMSLSFVFANQNIDATLEVVKKFGN---LPNILVQYTGKDYNQREYTLKVFKML 59

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVL--VTGRVIKEGKDRLRVE 127
             DL+ +  F +   +       +      F ++      ++  V+  VI++G   L V 
Sbjct: 60  IADLKVTGHFAVQEGEGL-----SGAMAINFDEYRKSKVDLVANVSAEVIRDG---LIVN 111

Query: 128 FRLWDVKDRKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            +L+DV     ++ K++ SS   ++  +AH ++ DI   I     D+  R++ VS    S
Sbjct: 112 LQLYDVNAGNLVLNKEYKSSQLPAYPFLAHKLAVDINDYIKAPSVDWMQRMVVVSYYTKS 171

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G  ++ +   D        L      +   P+++  +Q   Y T   +    ++  D   
Sbjct: 172 G--ESEIISSDYTLTYKNTLISG--GLNIFPKWANEEQSAFYYTKYLDKP-TLFKFDLIT 226

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               K+I +   M++A   S +  R L+++  +E  DIY  DL +   ++LTN   I++S
Sbjct: 227 GEN-KQILSSEGMLVASDVSKDSNRLLLTMAPNEQADIYLYDLSNGTLKKLTNYRGIDVS 285

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A++  D  +++F SDR G   ++ +  +G     + Q       +   +  G+ I ++  
Sbjct: 286 ANFIEDEKRVMFISDRLGYPNVFAISVDGESAGSVEQMVFHGRNNNAANAYGNYIVYSSR 345

Query: 367 S------GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                     F + ++       R L  +   Q P ++  G ++++ + ++  +   +  
Sbjct: 346 ETSEEFGSNTFNLYLVSTKSDFIRRLSANGVNQLPRFAKDGETIMYIKHENNQSALGIIR 405

Query: 421 IDLNGRNETLI 431
           ++    N+TL+
Sbjct: 406 LN---YNKTLL 413


>gi|156744050|ref|YP_001434179.1| WD40 domain-containing protein [Roseiflexus castenholzii DSM 13941]
 gi|156235378|gb|ABU60161.1| WD40 domain protein beta Propeller [Roseiflexus castenholzii DSM
           13941]
          Length = 572

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 48/225 (21%), Positives = 86/225 (38%), Gaps = 3/225 (1%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P Q ++ +A    ++                 +        +P +S +    + + ++ +
Sbjct: 32  PGQGRILFAAARGDNGAFDIFSADLAGERAANLTADPYPDRSPSWSPDANHVVFASRRGD 91

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D+Y +    +   RLTN    +   S+SPD  ++ F S R+G  ++Y +   G D +R
Sbjct: 92  NWDLYVMRADGSDLRRLTNHPAYDGEPSWSPDGRRVAFTSMRDGNPEIYTLDLIGGDARR 151

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
           I+    A+   P WSP G  IAFT +      I +   +      L    +   +P WSP
Sbjct: 152 ITT-HPAADAQPTWSPDGRRIAFTSWRDGNQEIYIADAESGAVINLTNHPAPDHSPAWSP 210

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            G  + F   +DG     +  + + G             DP W  
Sbjct: 211 DGGRIAFISDRDGGGNLHIRDL-ITGEELRAGPDNLGLRDPAWTP 254



 Score =  170 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 65/279 (23%), Positives = 113/279 (40%), Gaps = 14/279 (5%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
               RILF +    +G     +   D  G     LT         P +SP+   V +A+ 
Sbjct: 32  PGQGRILFAAARGDNGAF--DIFSADLAGERAANLTAD-PYPDRSPSWSPDANHVVFAS- 87

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              D   +Y+M        +R+ N  +    P +S +G+R   +  +D   +IY++DL  
Sbjct: 88  RRGDNWDLYVMRAD-GSDLRRLTNHPAYDGEPSWSPDGRRVAFTSMRDGNPEIYTLDLIG 146

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               R+T     +   ++SPD  +I F S R+G +++Y+  +       ++ +  A    
Sbjct: 147 GDARRITTHPAADAQPTWSPDGRRIAFTSWRDGNQEIYIADAESGAVINLT-NHPAPDHS 205

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFS--- 407
           P WSP G  IAF         + +     G + R   ++  L+ P W+P G  +  +   
Sbjct: 206 PAWSPDGGRIAFISDRDGGGNLHIRDLITGEELRAGPDNLGLRDPAWTPGGGLMAVAPWA 265

Query: 408 ---RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              R+     G  L+S  + G    + +   YA DP W 
Sbjct: 266 LGGRRFFSRQGVALFSPGMPGGTFVVASLHGYA-DPSWS 303


>gi|115376904|ref|ZP_01464125.1| protein TolB [Stigmatella aurantiaca DW4/3-1]
 gi|310825361|ref|YP_003957719.1| tol-pal system beta propeller repeat protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|115366083|gb|EAU65097.1| protein TolB [Stigmatella aurantiaca DW4/3-1]
 gi|309398433|gb|ADO75892.1| Tol-pal system beta propeller repeat protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 349

 Score =  185 bits (469), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 116/271 (42%), Gaps = 10/271 (3%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +L ++  +V+G     + +   DG     L P R +    P +SP+ + +  A  D    
Sbjct: 80  LLVIAARMVNGFHLEQMRLQPLDGGEPVALHPPRAR-TRNPSWSPDGRWLV-AESDARSF 137

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             +  ++ +     + +   +     P  S +G+       ++   +IY +        R
Sbjct: 138 SDLVRLEPKAGTQEQPLTQVKEGCFEPAVSPDGREVAFVSSREGDPEIYVMKADGTDERR 197

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWS 355
           +T     +    +SPD   + F S+REG+E+ ++++ +G+  + +S +  +    +  WS
Sbjct: 198 ITAFHQEDREPRWSPDGQWLSFISNREGRERYFLVRPDGTSLRAVSGEATKLDERELAWS 257

Query: 356 PQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGD 413
           P    + F +   E K  + V   DG     L +  S   AP WSP G+ L+F  ++ GD
Sbjct: 258 PDSKKVVFVERLPEAKSRLWVAAVDGGAPVALTDGRSRDDAPAWSPDGKYLVFVAERQGD 317

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               L+ +  +G  +T + T   A  P W+ 
Sbjct: 318 V--DLWLMRADGSGQTRLTT---AKGPDWLP 343



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 7/179 (3%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           + FVS           + VM  DG + R +T    +   EPR+SP+ Q +++ +  +   
Sbjct: 173 VAFVSSREGDP----EIYVMKADGTDERRITAFHQE-DREPRWSPDGQWLSFISNREGRE 227

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-IYSVDLQSNATE 295
               +               +       +S + K+ +   +  EA   ++   +   A  
Sbjct: 228 RYFLVRPDGTSLRAVSGEATKLDERELAWSPDSKKVVFVERLPEAKSRLWVAAVDGGAPV 287

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            LT+    + + ++SPD   +VF ++R+G   L++M+++GS Q R++  K    + P W
Sbjct: 288 ALTDGRSRDDAPAWSPDGKYLVFVAERQGDVDLWLMRADGSGQTRLTTAK-GPDWLPRW 345



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 20/190 (10%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE----GKE 326
                ++ +  D++ V   S    +LT +   +   +  SPD   ++  + R       E
Sbjct: 36  IAFISERADQKDVWLVKP-SGEETQLTKSPGEDDFPAAPSPDGKALLVIAARMVNGFHLE 94

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQER 384
           Q+ +   +G +   +     A   +P WSP G  +   +     F+  + +  K G+QE+
Sbjct: 95  QMRLQPLDGGEPVAL-HPPRARTRNPSWSPDGRWLV-AESDARSFSDLVRLEPKAGTQEQ 152

Query: 385 LLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAY 436
            L +       P  SP GR + F   ++GD   ++Y +  +G +E  I         P +
Sbjct: 153 PLTQVKEGCFEPAVSPDGREVAFVSSREGD--PEIYVMKADGTDERRITAFHQEDREPRW 210

Query: 437 ASDPQWVGFM 446
           + D QW+ F+
Sbjct: 211 SPDGQWLSFI 220


>gi|301058341|ref|ZP_07199374.1| putative Tol-Pal system beta propeller repeat protein TolB [delta
           proteobacterium NaphS2]
 gi|300447577|gb|EFK11309.1| putative Tol-Pal system beta propeller repeat protein TolB [delta
           proteobacterium NaphS2]
          Length = 205

 Score =  185 bits (469), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 53/201 (26%), Positives = 96/201 (47%), Gaps = 6/201 (2%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           +  A +R+     + +   ++ NGK   +++      DI+++DLQ     +L     I++
Sbjct: 8   VTGALRRLSGRSGLNIGACWAPNGKELALTMSHKGNPDIFTIDLQGKILRQLVEHWGIDV 67

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++SPD +++ F S+R G  Q+Y+++ +     R++ +   +   P WS   + IAF  
Sbjct: 68  SPAFSPDGTKLAFVSNRSGSPQIYLLEISSGRVDRLTYEGSYN-TSPAWSAL-NRIAFVG 125

Query: 366 FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +   F I  M  DGS  + L  +  N + P WSP GR + FS  + G     +Y ++ N
Sbjct: 126 KTDGHFDIFTMAPDGSGMKRLTADSGNNEDPCWSPDGRYIAFSSDRTG--AYHIYMMNAN 183

Query: 425 GRNETLINTP-AYASDPQWVG 444
           GR +  I       + P W  
Sbjct: 184 GRTQRRITFEKGKQTSPSWGP 204



 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 91/194 (46%), Gaps = 5/194 (2%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
              R  +     ++PN +++A  T   +    ++ +D +  +  +++     + ++P FS
Sbjct: 15  LSGRSGLNIGACWAPNGKELA-LTMSHKGNPDIFTIDLQ-GKILRQLVEHWGIDVSPAFS 72

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G +      +  +  IY +++ S   +RLT     N S ++S   ++I F    +G  
Sbjct: 73  PDGTKLAFVSNRSGSPQIYLLEISSGRVDRLTYEGSYNTSPAWSAL-NRIAFVGKTDGHF 131

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERL 385
            ++ M  +GS  KR++ D   +  DP WSP G  IAF+      + I +M  +G +Q R+
Sbjct: 132 DIFTMAPDGSGMKRLTADS-GNNEDPCWSPDGRYIAFSSDRTGAYHIYMMNANGRTQRRI 190

Query: 386 LVEDSNLQAPTWSP 399
             E     +P+W P
Sbjct: 191 TFEKGKQTSPSWGP 204



 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 47/171 (27%), Positives = 75/171 (43%), Gaps = 5/171 (2%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S      +  +D  G  +R L      I   P FSP+  K+A+ +       ++YL++  
Sbjct: 39  SHKGNPDIFTIDLQGKILRQLVE-HWGIDVSPAFSPDGTKLAFVSNRSGSP-QIYLLEIS 96

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R   R+    S   +P +S+   R     + D   DI+++    +  +RLT     N 
Sbjct: 97  SGR-VDRLTYEGSYNTSPAWSAL-NRIAFVGKTDGHFDIFTMAPDGSGMKRLTADSGNNE 154

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
              +SPD   I F SDR G   +Y+M +NG  Q+RI+ +K      P W P
Sbjct: 155 DPCWSPDGRYIAFSSDRTGAYHIYMMNANGRTQRRITFEK-GKQTSPSWGP 204



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 45/119 (37%), Gaps = 3/119 (2%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           LY+        +R+S  +        W+P G  +A T        I  +   G   R LV
Sbjct: 2   LYLRDLVTGALRRLS-GRSGLNIGACWAPNGKELALTMSHKGNPDIFTIDLQGKILRQLV 60

Query: 388 EDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
           E   +  +P +SP G  L F   + G     L  I  +GR + L    +Y + P W   
Sbjct: 61  EHWGIDVSPAFSPDGTKLAFVSNRSGSPQIYLLEIS-SGRVDRLTYEGSYNTSPAWSAL 118


>gi|158339964|ref|YP_001521134.1| WD-40-like beta propeller repeat-containing protein [Acaryochloris
           marina MBIC11017]
 gi|158310205|gb|ABW31820.1| WD40-like Beta Propeller, putative [Acaryochloris marina MBIC11017]
          Length = 344

 Score =  184 bits (467), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 55/227 (24%), Positives = 104/227 (45%), Gaps = 12/227 (5%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A+    D++   ++LM T      KR+        +P +S +G R      ++   D+Y
Sbjct: 33  IAFTGEQDKNNRDIFLM-TADGSNRKRLTTHPGEDWSPVWSPDGTRLAFISDRNGQSDLY 91

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ------LYVMQSNGSDQK 339
            ++L  +   RLT+    +   ++SPDS  I F S R+  +Q      +Y++    S+ K
Sbjct: 92  LINLDGSQLTRLTSHAARDEDPAWSPDSQHITFVSKRDANQQHPYNTEIYLLNIKDSEIK 151

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WS 398
           R++ +       P WSP G  I F++   +   + +M  +G++ + L +D N      WS
Sbjct: 152 RLT-EHVGEDSSPSWSPDGQQIVFSRKIQDNADLFLMTPEGTEFKQLTDDPNDDWNADWS 210

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
           P G+ ++F+  +       LY I+ +G N + L   P   +  +W  
Sbjct: 211 PDGQQIVFTSGRSN--NVDLYVINADGSNLKRLTQDPEDENQGRWSP 255



 Score =  183 bits (465), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 64/276 (23%), Positives = 126/276 (45%), Gaps = 17/276 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +R+ F+S+       ++ L +++ DG+ +  LT S      +P +SP+ Q + + +  D 
Sbjct: 76  TRLAFISDR----NGQSDLYLINLDGSQLTRLT-SHAARDEDPAWSPDSQHITFVSKRDA 130

Query: 235 DILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +    Y  +  +    D   KR+        +P +S +G++ + S +  +  D++ +  +
Sbjct: 131 NQQHPYNTEIYLLNIKDSEIKRLTEHVGEDSSPSWSPDGQQIVFSRKIQDNADLFLMTPE 190

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
               ++LT+    + +A +SPD  QIVF S R     LYV+ ++GS+ KR++QD E    
Sbjct: 191 GTEFKQLTDDPNDDWNADWSPDGQQIVFTSGRSNNVDLYVINADGSNLKRLTQDPE-DEN 249

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRK 409
              WSP G  IA+   S  ++ +  +  +G+    +  D  L+ A  W P+   ++F  K
Sbjct: 250 QGRWSPSGHRIAYISLSQNQWDLYTILPNGTGRTRVTNDDALELAFDWLPNSNKILFESK 309

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
                   +Y  ++ G  +  +        P W   
Sbjct: 310 DG------IYQANVIGSKKQQMTDNPKDGSPTWKPL 339



 Score =  176 bits (446), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 59/262 (22%), Positives = 112/262 (42%), Gaps = 13/262 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
             ++ +         + +M  DG+N + LT       + P +SP+  ++A+ +  +    
Sbjct: 31  FVIAFTGEQDKNNRDIFLMTADGSNRKRLTT-HPGEDWSPVWSPDGTRLAFISDRNGQS- 88

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------IYSVDLQS 291
            +YL++        R+ +  +    P +S + +      ++D          IY ++++ 
Sbjct: 89  DLYLINLD-GSQLTRLTSHAARDEDPAWSPDSQHITFVSKRDANQQHPYNTEIYLLNIKD 147

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           +  +RLT  +  + S S+SPD  QIVF    +    L++M   G++ K+++ D    +  
Sbjct: 148 SEIKRLTEHVGEDSSPSWSPDGQQIVFSRKIQDNADLFLMTPEGTEFKQLTDDPNDDWNA 207

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKK 410
             WSP G  I FT        + V+  DGS  + L +D   +    WSPSG  + +    
Sbjct: 208 -DWSPDGQQIVFTSGRSNNVDLYVINADGSNLKRLTQDPEDENQGRWSPSGHRIAYISLS 266

Query: 411 DGDTGSKLYSIDLNGRNETLIN 432
                  LY+I  NG   T + 
Sbjct: 267 QNQW--DLYTILPNGTGRTRVT 286


>gi|224438537|ref|ZP_03659457.1| translocation protein TolB [Helicobacter cinaedi CCUG 18818]
 gi|313144963|ref|ZP_07807156.1| protein tolB [Helicobacter cinaedi CCUG 18818]
 gi|313129994|gb|EFR47611.1| protein tolB [Helicobacter cinaedi CCUG 18818]
          Length = 417

 Score =  183 bits (464), Expect = 6e-44,   Method: Composition-based stats.
 Identities = 76/405 (18%), Positives = 162/405 (40%), Gaps = 31/405 (7%)

Query: 31  SIHAFVKVATNSANYSPVS-IAFTKFVSID-ELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
           +I A +++  N    + +  I   +  S + + G KV +++  DL+ S  F         
Sbjct: 16  AIDATLEIVKNG---NKIPYIMVERLDSENADFGTKVLKMLVADLKVSGHFQADDGG--- 69

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
               N  +   + D+      +L   +V K     L     L+D+   K I  K +  + 
Sbjct: 70  ---VNKSNDINYADYAEKKMDLLAQIKVAKSST--LTATLSLYDINTSKHIFTKTYTEND 124

Query: 149 -ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
              +  +AH ++ DI   I      +  R++ +S  V SG   + + + D      + + 
Sbjct: 125 IKRFPFLAHNMTIDINSYIKAPSIQWMQRLVVLSRYVGSGS--SEILICDYTLTYQKVVV 182

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                +   P+++ ++Q+  Y T   E +  +   +    +  + +G+   + +    S 
Sbjct: 183 KG--GLNIFPKWADSKQESIYYTKYLE-VPTIVKHNLATGQIEQLVGS-EGVAIVSDVSK 238

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG+  ++S+      D+Y  + +S    RLTN   I++   +  D  +I+F SDR G   
Sbjct: 239 NGENLILSLSPTALSDLYIFNTKSKNLRRLTNYSGIDVDGKFVNDEKEIIFVSDRLGYPN 298

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVMKKD-G 380
           +++M+ +G   +++      +      +  G    +T         G  F + ++    G
Sbjct: 299 IFMMRLDGGGTEQVVLHGRNN---SAITSNGKYAVYTSRETNNEFGGNTFNLYLISLAPG 355

Query: 381 SQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           S   R L  +   Q P +S  G S+++ +     +   +  +D N
Sbjct: 356 SNYIRRLTANGKNQMPKYSSDGGSIMYLKHYKNQSALGIIRVDYN 400


>gi|322379221|ref|ZP_08053612.1| translocation protein TolB [Helicobacter suis HS1]
 gi|322379706|ref|ZP_08054019.1| translocation protein TolB [Helicobacter suis HS5]
 gi|321147855|gb|EFX42442.1| translocation protein TolB [Helicobacter suis HS5]
 gi|321148361|gb|EFX42870.1| translocation protein TolB [Helicobacter suis HS1]
          Length = 413

 Score =  182 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 79/420 (18%), Positives = 167/420 (39%), Gaps = 32/420 (7%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M+I L L L+       T   A + +         V+I    + + D    K++ +++ D
Sbjct: 1   MRI-LWLFLLCYSSLLAT--DATLDIVKTIGKLPKVAI---FYQNTDPYLKKIARLLASD 54

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  F ++     + +       P +    + G Q+LV      +     ++   L+D
Sbjct: 55  LKISGHFEVMGAPQIQTQ------TPSYDSLATKGIQILV----EIKADQNHQIHATLYD 104

Query: 133 VKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           + +R     K + F++ A +  IAH ++ D    I      +  R++  ++ +  G+   
Sbjct: 105 IANRSIKASKDYEFNTKALYPFIAHRVAIDTNALIQAPSIAWMQRMVVFAKYLSPGVT-- 162

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           S+ V D   +  + +    + +   P+++  +Q  + +  Y  E  +  Y + T      
Sbjct: 163 SIVVADYTLSYQQEIIK-NNLLNIFPKWANADQSAIYFTQYLREPTIIKYDIRT---GKS 218

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + I     M      S NG + L+S+  D   DI+  D    + +RLT    I++  ++ 
Sbjct: 219 EAITQSSGMAAVSSVSKNGDKLLLSLAPDGQTDIFFYDTLKKSLKRLTTYSGIDVMGTFV 278

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            +   +VF SDR G   +Y+ +   +    + Q    +  +   +  GD I +     + 
Sbjct: 279 DNEKAMVFVSDRSGYPNIYLKKLRENAP--VEQVVFYAKNNDSITASGDNIVYVSREDKD 336

Query: 371 ------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 F + ++       R L      Q P +S  G++++F +K    +   +  +D N
Sbjct: 337 ANGQSTFNLHLITLKSDYVRRLTVSGVNQMPRFSYDGKAVMFLKKAASQSALGVILLDSN 396



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 65/192 (33%), Gaps = 20/192 (10%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS----------RDQ 212
           Y   TG+           + S VS      L  +  DG    +   +             
Sbjct: 211 YDIRTGKSEAITQSSGMAAVSSVSKNGDKLLLSLAPDGQTDIFFYDTLKKSLKRLTTYSG 270

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           I     F  N++ + + + D      +YL   R +   +++  +     +   S  G   
Sbjct: 271 IDVMGTFVDNEKAMVFVS-DRSGYPNIYLKKLRENAPVEQVVFYAKNNDSITAS--GDNI 327

Query: 273 LISVQKD------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +   ++D         +++ + L+S+   RLT +  +N    +S D   ++F      + 
Sbjct: 328 VYVSREDKDANGQSTFNLHLITLKSDYVRRLTVS-GVNQMPRFSYDGKAVMFLKKAASQS 386

Query: 327 QLYVMQSNGSDQ 338
            L V+  + +  
Sbjct: 387 ALGVILLDSNQS 398


>gi|242310687|ref|ZP_04809842.1| translocation protein TolB [Helicobacter pullorum MIT 98-5489]
 gi|239523085|gb|EEQ62951.1| translocation protein TolB [Helicobacter pullorum MIT 98-5489]
          Length = 426

 Score =  182 bits (463), Expect = 7e-44,   Method: Composition-based stats.
 Identities = 78/429 (18%), Positives = 173/429 (40%), Gaps = 29/429 (6%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSEVV 69
           KI + +LL +   F    I A ++V     N   +     ++   D    E   ++ +++
Sbjct: 3   KICVWVLLCVNCLFANQEIDATLEVVKKFGN---LPNILVQYSGKDYNQREYTLRIFKML 59

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
             DL+ +  F +    +        + +  F ++      ++            L V  +
Sbjct: 60  VADLKVTGHFTVQEDGNIAN-----EMVLNFDEYRKAKIDLIARVSAEILQDG-LVVNLQ 113

Query: 130 LWDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           L+D       + K++ +S A  +  +AH ++ DI   I     D+  RI+ VS     G 
Sbjct: 114 LYDANSGTLALSKEYKNSRAETYPFLAHKLAIDINDYIQAPNVDWMERIVVVSYYTKPG- 172

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            ++ + + D        L      +   P+++ N+Q+ A+      D   ++  D    +
Sbjct: 173 -ESEILLSDYTLTYKNSLIKG--GLNIFPKWA-NEQQNAFYYTKYLDKPTLFKYDLTTGQ 228

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             + I +   M++A   S +  + L+++  +E  DI+  D+ S    +LTN   I++S +
Sbjct: 229 NTQIISS-EGMLVASDVSKDSTKILLTMAPNEQADIFLYDIPSAKLTKLTNYRGIDVSGN 287

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--- 365
           +  D  +++F SDR G   ++ +   G     + Q       +   +  G+ I ++    
Sbjct: 288 FIEDEKRVMFISDRLGYPNVFAISVEGEANGSLEQMVFHGRNNNAANAFGEYIVYSSRET 347

Query: 366 ---FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              FS   F + ++       R L  +   Q P +S  G ++++ + +   +   +  ++
Sbjct: 348 NEDFSRNTFNLYLVSTKSDFIRRLSANGINQLPRFSKDGETIMYVKHESNQSALGIIRLN 407

Query: 423 LNGRNETLI 431
               N+TL+
Sbjct: 408 ---YNKTLL 413


>gi|296273864|ref|YP_003656495.1| TolB domain-containing protein [Arcobacter nitrofigilis DSM 7299]
 gi|296098038|gb|ADG93988.1| TolB domain protein [Arcobacter nitrofigilis DSM 7299]
          Length = 422

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 77/418 (18%), Positives = 169/418 (40%), Gaps = 22/418 (5%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
           K+   L L+ I  F   ++ A +++   S N   + I+     +  E   K+ +++ +DL
Sbjct: 3   KVFFLLTLICINLF---AVDASMEIIKKSDNLPKIEISAASDTANIEYVNKIKKLLIQDL 59

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
             S  F  +S +      +NP+ +       + G  + +   + +     L +  +L+D 
Sbjct: 60  LVSGHFEAMSSNEKISFSSNPNMLG----LKNKGIDLFLNISIKESSFGGLNLNIKLFDN 115

Query: 134 KDRKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
              + I+ K   SS    +  +AH  +  I + +     D+  +  FV  SV     + +
Sbjct: 116 NLMQLILEKTISSSQLDRYPFVAHRAAIIINKHLNAPSIDWMDK--FVIFSVYKDAKEAN 173

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D      + +      +   P+++ ++Q   Y T       ++   +    R    
Sbjct: 174 IVIGDYTLTFQKTIIKG--GLNIFPKWANDKQDSFYYTSYRGSSPQLIKYNLYT-RKVDY 230

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I   + MI+    + +G + LI+   +   DIY  D ++   ERLTN   I++ A ++ +
Sbjct: 231 IMKSQGMIVCSDVNKDGSKLLITASPEGQPDIYLYDTKNKRKERLTNYKGIDVGAHFAEN 290

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------F 366
            ++IVF SDR     ++  + NG   +R+    + +     +      + ++       F
Sbjct: 291 DTKIVFVSDRLNHPNIFSKKINGRGVERLVYHGKNNSSATTF---DSYVVYSSRETQNEF 347

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +   F + ++       R L  +   Q P +S  G S++F +     +   +  ++ N
Sbjct: 348 TDNTFNLYLISLKSDFIRRLTTNGVNQFPKFSNDGESVLFIKNYQNRSNVGIIRLNYN 405


>gi|320160892|ref|YP_004174116.1| hypothetical protein ANT_14880 [Anaerolinea thermophila UNI-1]
 gi|319994745|dbj|BAJ63516.1| hypothetical protein ANT_14880 [Anaerolinea thermophila UNI-1]
          Length = 287

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 7/253 (2%)

Query: 195 VMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           +   D +N + L   ++    F   ++P+ + +A+ + D    L ++++DT+        
Sbjct: 39  IWMLDTSNDKLLNLSNKSSDDFWQTWAPDGRYLAFTS-DRSGNLDIWILDTQ-KEVVFNY 96

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            N       P +S +GK    +  ++   DI+ ++   +    LT     +   ++SPDS
Sbjct: 97  TNNPEDEGWPAWSPDGKYLAYASNREGTYDIWRMNSDGSNRVNLTPGDGDDGLPAWSPDS 156

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +IVF S+R G   LY+   NG + ++I+ D EA    P WSP G  IAF         I
Sbjct: 157 QRIVFSSNRNGNYDLYIASVNGGELEQITSD-EADDIMPAWSPDGKKIAFVSKRDGNSEI 215

Query: 374 GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +          L     N + P W P G  ++F  ++  D    +YS+  +G     + 
Sbjct: 216 YLYDIASKGVTNLTKNPYNDETPAWYPDGSRILFVSER-FDNQWDVYSMKPDGSEVRRLT 274

Query: 433 TPA-YASDPQWVG 444
                   P W  
Sbjct: 275 HDELQEFHPMWRP 287



 Score =  165 bits (418), Expect = 1e-38,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 92/219 (42%), Gaps = 5/219 (2%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y T+          M    +     + N  S      ++ +G+    +  +   +DI+ +
Sbjct: 27  YLTFTIRAQNSEIWMLDTSNDKLLNLSNKSSDDFWQTWAPDGRYLAFTSDRSGNLDIWIL 86

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D Q       TN        ++SPD   + + S+REG   ++ M S+GS++  ++   + 
Sbjct: 87  DTQKEVVFNYTNNPEDEGWPAWSPDGKYLAYASNREGTYDIWRMNSDGSNRVNLTP-GDG 145

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIF 406
               P WSP    I F+      + + +   +G + E++  ++++   P WSP G+ + F
Sbjct: 146 DDGLPAWSPDSQRIVFSSNRNGNYDLYIASVNGGELEQITSDEADDIMPAWSPDGKKIAF 205

Query: 407 SRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
             K+DG   S++Y  D+  +  T L   P     P W  
Sbjct: 206 VSKRDG--NSEIYLYDIASKGVTNLTKNPYNDETPAWYP 242


>gi|313141735|ref|ZP_07803928.1| translocation protein TolB [Helicobacter canadensis MIT 98-5491]
 gi|313130766|gb|EFR48383.1| translocation protein TolB [Helicobacter canadensis MIT 98-5491]
          Length = 417

 Score =  180 bits (457), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 82/422 (19%), Positives = 176/422 (41%), Gaps = 33/422 (7%)

Query: 23  LIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSEVVSKDLQRSDV 78
           L   F   +I A ++V     N   +     ++   D    E   KV +++  DL+ +  
Sbjct: 3   LSFVFANQNIDATLEVVKKFGN---LPNILVQYTGKDYNQREYTLKVFKMLIADLKVTGH 59

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVL--VTGRVIKEGKDRLRVEFRLWDVKDR 136
           F +   +       +      F ++      ++  V+  VI++G   L V  +L+DV   
Sbjct: 60  FAVQEGEGL-----SGAMAINFDEYRKSKVDLVANVSAEVIRDG---LIVNLQLYDVNAG 111

Query: 137 KQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
             ++ K++ SS   ++  +AH ++ DI   I     D+  R++ VS    SG  ++ +  
Sbjct: 112 NLVLNKEYKSSQLPAYPFLAHKLAVDINDYIKAPSVDWMQRMVVVSYYTKSG--ESEIIS 169

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D        L      +   P+++  +Q   Y T   +    ++  D       K+I +
Sbjct: 170 SDYTLTYKNTLISG--GLNIFPKWANEEQSAFYYTKYLDKP-TLFKFDLITGEN-KQILS 225

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
              M++A   S +  R L+++  +E  DIY  DL +   ++LTN   I++SA++  D  +
Sbjct: 226 SEGMLVASDVSKDSNRLLLTMAPNEQADIYLYDLSNGTLKKLTNYRGIDVSANFIEDEKR 285

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GE 369
           ++F SDR G   ++ +  +G     + Q       +   +  G+ I ++           
Sbjct: 286 VMFISDRLGYPNVFAISVDGESAGSVEQMVFHGRNNNAANAYGNYIVYSSRETSEEFGSN 345

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            F + ++       R L  +   Q P ++  G ++++ + ++  +   +  ++    N+T
Sbjct: 346 TFNLYLVSTKSDFIRRLSANGVNQLPRFAKDGETIMYIKHENNQSALGIIRLN---YNKT 402

Query: 430 LI 431
           L+
Sbjct: 403 LL 404


>gi|225165753|ref|ZP_03727545.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Opitutaceae bacterium TAV2]
 gi|224800006|gb|EEG18443.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Opitutaceae bacterium TAV2]
          Length = 410

 Score =  179 bits (453), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 77/315 (24%), Positives = 130/315 (41%), Gaps = 16/315 (5%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY--------QS 165
           GR  +       V F        +  + +   ++P   + +A T +            ++
Sbjct: 75  GRYRRVASGGFDVRFTAVGGNQVQVSVTRGAEATPVVSQVVAGTSARSALLAAADVAVKA 134

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            +G  G FN+R+ F+SE       K  +   D     IR +T   + +   PR+SP+ Q 
Sbjct: 135 TSGLNGYFNTRLAFISER----SGKPEVYTSDLFAGEIRQITHD-NALAVSPRWSPDGQG 189

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           + Y +Y       ++ MD    +    + +F+      R+S NG +  + +  +   ++Y
Sbjct: 190 IIYTSYFRRGFPDIFKMDLNTLQRSTLV-SFKGTNTGARYSPNGAQIAMVLSGEGNPELY 248

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             D Q     RLT T  +  S  +SPD SQ+VF SD  G  QLYVM + G    R+  + 
Sbjct: 249 ISDSQGRGVRRLTRTASVEASPCFSPDGSQLVFTSDAAGGPQLYVMSTAGGGASRLPTNL 308

Query: 346 EASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRS 403
                +P WS    + IAFT   G  F I V         ++ +  N    P+W   GR 
Sbjct: 309 SRYCAEPDWSRANPNKIAFTVRIGSGFQIAVYDMSTRSAAVVSKAPNDAVEPSWLADGRH 368

Query: 404 LIFSRKKDGDTGSKL 418
           LI++++        +
Sbjct: 369 LIYTQRSANKRSLHI 383



 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 7/178 (3%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-REGKEQL 328
            R     ++    ++Y+ DL +    ++T+   + +S  +SPD   I++ S  R G   +
Sbjct: 144 TRLAFISERSGKPEVYTSDLFAGEIRQITHDNALAVSPRWSPDGQGIIYTSYFRRGFPDI 203

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           + M  N   +  +   K  +     +SP G  IA          + +    G   R L  
Sbjct: 204 FKMDLNTLQRSTLVSFKGTNTGA-RYSPNGAQIAMVLSGEGNPELYISDSQGRGVRRLTR 262

Query: 389 DSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYASDPQWV 443
            ++++ +P +SP G  L+F+    G  G +LY +   G   + + T    Y ++P W 
Sbjct: 263 TASVEASPCFSPDGSQLVFTSDAAG--GPQLYVMSTAGGGASRLPTNLSRYCAEPDWS 318



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 66/175 (37%), Gaps = 3/175 (1%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V+SG     L + D  G  +R LT +   +   P FSP+  ++ + + D     ++Y+M 
Sbjct: 238 VLSGEGNPELYISDSQGRGVRRLTRTAS-VEASPCFSPDGSQLVFTS-DAAGGPQLYVMS 295

Query: 244 TRIDRAPKRIGNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           T    A +   N       P +S +N  +   +V+      I   D+ + +   ++    
Sbjct: 296 TAGGGASRLPTNLSRYCAEPDWSRANPNKIAFTVRIGSGFQIAVYDMSTRSAAVVSKAPN 355

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
             +  S+  D   +++      K  L+++ +       +S  +          P 
Sbjct: 356 DAVEPSWLADGRHLIYTQRSANKRSLHILDTETGRSMLVSAGQLGQCSQASVWPN 410


>gi|291276672|ref|YP_003516444.1| putative protein tolB precursor [Helicobacter mustelae 12198]
 gi|290963866|emb|CBG39702.1| putative protein tolB precursor [Helicobacter mustelae 12198]
          Length = 418

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 68/420 (16%), Positives = 164/420 (39%), Gaps = 27/420 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M   +   L+     +  S+ A + +         + + +    + D    ++  V+  D
Sbjct: 1   MSRIVISFLIFFQMLW--SVDATIDLVKTIQKTPSIQVTYLDNKNTD-FAQEIYRVLLGD 57

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           LQ +  F         ++ +     P + ++      + +   V+KE  + ++V  +L+D
Sbjct: 58  LQVTGHF-------LVREGSKGRRNPDYTEFIQQKTDLYINIEVLKEDAN-IKVILKLFD 109

Query: 133 VKDRKQIIGKKFF-SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           V  +  ++ K +     A +  +AH I+ D    I     D+  R  +V  S   G  +N
Sbjct: 110 VNMQNLVLNKAYTLDDEALYPFVAHKIAIDANNYIKAPSIDWMKR--YVVLSANVGPRRN 167

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + + D      + +    D +   P+++  +Q   Y T    D   +   +     + +
Sbjct: 168 DILISDYTLTYRKVILN--DGLNVFPKWANAEQTEIYYTKITRDFPIIIKYNIYTGISSE 225

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            I   R + +    S +GK+AL+++  +   DIY  D  +    ++T    I++S ++  
Sbjct: 226 -ILRGRGLAIVSNVSKDGKKALMTLAPNGDPDIYLYDFDTKQRIQMTKYRGIDVSGNFID 284

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           + + ++F SDR G   ++  +   +   +++    + +     ++   + + +T      
Sbjct: 285 NDTAMIFVSDRLGYPNIFTKKLQENAPIEQVVFHGKNNSSVTAYN---NYVVYTSRDTNN 341

Query: 371 ------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 F + ++       R L  +   Q P +S  G S++F +     +   +  ++ N
Sbjct: 342 EFGQNTFNLYLISMKSDFIRRLTTNGVNQMPKFSADGGSVMFIKNSGKQSALGIIRLNYN 401


>gi|40062542|gb|AAR37487.1| tolB protein, putative [uncultured marine bacterium 106]
          Length = 442

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 86/445 (19%), Positives = 176/445 (39%), Gaps = 38/445 (8%)

Query: 10  ELNMKINLCLLLVLIGGFFPT---SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVS 66
           +L +++   L+ +L G    T   S+ A       +  + PV +  +K  S + +  +  
Sbjct: 24  QLKLRMRAGLVFLLFGLIMHTCGGSVSAIDYFEITNPKFIPVKVGLSKESSPEVVFLQ-- 81

Query: 67  EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
            V   +L++   F  I++    ++    + +    D        L+   +  +G+ +  V
Sbjct: 82  NVFKTNLEKVLYFQFITESK--EEFDQSEKVIFHLDLELKSKPFLLKIMLWSQGE-KTPV 138

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              L+ V   +              RK+   ++D   ++  G +G   SRI +   +   
Sbjct: 139 SKELFPVGTNQ------------DLRKLGLKLADWFVENTLGFEGVSTSRISY---TAQK 183

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              + ++ +   DG  ++  + +         +S +   + Y T          L     
Sbjct: 184 SNRRKNIFLSSFDGTVLKRFSYNLGSNNLS-SWSFDGNNILYTTLTRSSA---QLAIQPA 239

Query: 247 DRAPKRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            R   +I +F S    L+  ++ +G+  L+++ K    DIY+  L++    ++     + 
Sbjct: 240 KRLRAKILSFPSGFQPLSASWNLDGESILLTLMKQGNADIYNYHLENAQLNKIFAWKSLE 299

Query: 305 ISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            S   SPD  +I F SD  R  + Q+Y+   N    +R++     +   P WSP G  + 
Sbjct: 300 TSPQMSPDGRKIAFVSDSARPRRPQIYIHNLNTLKTERVTFKGNFN-SSPNWSPNGTQLI 358

Query: 363 FTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +     F + +      +  +L     N + P W+P+G+ ++FS KK      KLY I
Sbjct: 359 YERQEKGYFQLYIYTLSTRRHLQLTFGRFNSEKPDWAPNGKQIVFSAKK--KNVPKLYYI 416

Query: 422 DL-NGRNETLINTPAYASD--PQWV 443
               GR   +  TP+  ++  P W 
Sbjct: 417 SSFGGRTIRVTKTPSNIAETNPVWS 441


>gi|167946735|ref|ZP_02533809.1| TolB [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 286

 Score =  178 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 56/196 (28%), Positives = 103/196 (52%), Gaps = 5/196 (2%)

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           +S DL RS  F ++ ++      ++ D +  F+DW  LG + LV G++   G     V F
Sbjct: 1   ISADLHRSGRFKVLPREDLLALPSSGDEV-EFKDWRILGVENLVVGQIQPNGPGGYIVRF 59

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV-SESVVSG 187
           +L+DV   +Q+ G    ++  + R  AH ++D IY+ + G KG F +RI ++ S+   +G
Sbjct: 60  QLFDVFRGEQLTGYSIPTTAPNLRSTAHHVADLIYEVLLGMKGAFATRIAYITSQQGANG 119

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             + +L V D DG N   +  S  + L  P +SP+ +K+AY ++++     +Y+ +    
Sbjct: 120 EQQVALRVADADGHNPETIV-SSSEPLMSPAWSPDGRKIAYVSFENGRSA-IYMQEVYTG 177

Query: 248 RAPKRIGNFRSMILAP 263
              ++I  F+ +  AP
Sbjct: 178 -HRRKITEFKGINSAP 192



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 41/98 (41%), Gaps = 8/98 (8%)

Query: 270 KRALISVQKDEA-----MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            R      +  A     + +   D   +  E + ++    +S ++SPD  +I + S   G
Sbjct: 106 TRIAYITSQQGANGEQQVALRVADADGHNPETIVSSSEPLMSPAWSPDGRKIAYVSFENG 165

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPV---WSPQGD 359
           +  +Y+ +     +++I++ K  +    +   WS  GD
Sbjct: 166 RSAIYMQEVYTGHRRKITEFKGINSAPGLVTGWSQAGD 203



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 6/81 (7%)

Query: 313 SSQIVFESDREGKEQ-----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +++I + + ++G        L V  ++G + + I    E     P WSP G  IA+  F 
Sbjct: 105 ATRIAYITSQQGANGEQQVALRVADADGHNPETIVSSSE-PLMSPAWSPDGRKIAYVSFE 163

Query: 368 GEKFAIGVMKKDGSQERLLVE 388
             + AI + +      R + E
Sbjct: 164 NGRSAIYMQEVYTGHRRKITE 184



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 9/89 (10%)

Query: 359 DLIAFTKFSGE-----KFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             IA+           + A+ V   DG + E ++     L +P WSP GR + +   ++G
Sbjct: 106 TRIAYITSQQGANGEQQVALRVADADGHNPETIVSSSEPLMSPAWSPDGRKIAYVSFENG 165

Query: 413 DTGSKLYSIDL-NGRNETLINTPAYASDP 440
              S +Y  ++  G    +       S P
Sbjct: 166 R--SAIYMQEVYTGHRRKITEFKGINSAP 192


>gi|297183048|gb|ADI19193.1| periplasmic component of the tol biopolymer transport system
           [uncultured delta proteobacterium HF0130_20J24]
          Length = 441

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 88/446 (19%), Positives = 161/446 (36%), Gaps = 45/446 (10%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
                 + LL+ LI      S  A       S  + PV +   K   ++    +V +V  
Sbjct: 27  FTKAAFVLLLMGLITSLCVRSAVAIDYFEITSPKFVPVKVGLIK--GMETEVAEVQKVFK 84

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            +L++   F +I             +   F       ++ +V    +   K+  ++E  L
Sbjct: 85  DNLEKVLYFQII-----------EGTKEDFAQ-----SEEVVFLLGMLLNKNPYQLEINL 128

Query: 131 W--D---VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           W  D      +K II K+        R     ++D         KG   S+I +   +  
Sbjct: 129 WRHDEELPAYQKVIILKE----TNKLRDTGILLADWFVSKTLNFKGVSKSKIAY---TAQ 181

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
               + ++ +   DG   +  + +         +S + + + Y T+       V L    
Sbjct: 182 KTNRRKNIMLSSYDGTVQKRFSYNLGSNNLA-SWSFDNKNILYTTFTRS---SVQLTIQP 237

Query: 246 IDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
             R   +I +F S    L   +  +G+  L+++ K    DIYS +L++   E++     +
Sbjct: 238 SIRLRAKILSFPSAFQPLGASWRIDGESILLTLMKKGNSDIYSYNLKNAKLEKIFAWKSL 297

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             S   S D  +I F SD     + Q+YV        +R++     +   P WSP    +
Sbjct: 298 ETSPQMSQDGQKIAFVSDSASPNRPQIYVYNLLNRKTERVTFRGSYN-SSPKWSPDATQL 356

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            + +     F +        +   L       + P WSP+G+ ++FS KK     SKLY 
Sbjct: 357 IYERQVKGVFQLFKYTLHNRRHTQLTFGRYDSEKPDWSPNGKQIVFSAKKGN--VSKLYY 414

Query: 421 IDLNGRNETLINTPAYA---SDPQWV 443
           I   G     + T       ++P W 
Sbjct: 415 ISAFGGRTIRVTTNDNNIEETNPVWS 440



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 63/178 (35%), Gaps = 3/178 (1%)

Query: 270 KRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +   + QK +   +I          +R +  L  N  AS+S D+  I++ +      QL
Sbjct: 174 SKIAYTAQKTNRRKNIMLSSYDGTVQKRFSYNLGSNNLASWSFDNKNILYTTFTRSSVQL 233

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLV 387
            +  S     K +S           W   G+ I  T        I       ++ E++  
Sbjct: 234 TIQPSIRLRAKILSFPSAFQPLGASWRIDGESILLTLMKKGNSDIYSYNLKNAKLEKIFA 293

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
             S   +P  S  G+ + F          ++Y  +L N + E +    +Y S P+W  
Sbjct: 294 WKSLETSPQMSQDGQKIAFVSDSASPNRPQIYVYNLLNRKTERVTFRGSYNSSPKWSP 351


>gi|148656049|ref|YP_001276254.1| WD40 domain-containing protein [Roseiflexus sp. RS-1]
 gi|148568159|gb|ABQ90304.1| WD40 domain protein beta Propeller [Roseiflexus sp. RS-1]
          Length = 567

 Score =  177 bits (449), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 86/225 (38%), Gaps = 4/225 (1%)

Query: 222 NQQ-KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           + Q ++ +A    +                  +        +P +S  G R + + ++  
Sbjct: 27  DGQGRIVFAASRGDGGAFDIFSADLAGERVVNLTADPHPDRSPSWSPAGDRIVFASRRAS 86

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D+Y +    +   RLT     +   ++SPD  QI F S R+G+  +Y +  +  D +R
Sbjct: 87  NWDLYVMRADGSDLRRLTEHPAYDGEPAWSPDGRQIAFTSMRDGQLDIYTLDLDSGDLRR 146

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
           I+    A    P W+P G  +AFT +      I +   +GS    L    +   +P WSP
Sbjct: 147 ITSHPSA-DSQPTWAPDGRRLAFTSWRDSNQEIYITDVEGSTIVNLTNHPAPDHSPAWSP 205

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            GR + F   +DG     +  + + G             DP W  
Sbjct: 206 DGRFIAFISDRDGGGNLHIADL-VTGEERRAGPDNLGLRDPAWTP 249



 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 61/286 (21%), Positives = 117/286 (40%), Gaps = 14/286 (4%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +   + D   RI+F +     G     +   D  G  +  LT         P +SP   
Sbjct: 20  KVHAAQQDGQGRIVFAASRGDGGAF--DIFSADLAGERVVNLTAD-PHPDRSPSWSPAGD 76

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++ +A+    +   +Y+M        +R+    +    P +S +G++   +  +D  +DI
Sbjct: 77  RIVFASRRASN-WDLYVMRAD-GSDLRRLTEHPAYDGEPAWSPDGRQIAFTSMRDGQLDI 134

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           Y++DL S    R+T+    +   +++PD  ++ F S R+  +++Y+    GS    ++ +
Sbjct: 135 YTLDLDSGDLRRITSHPSADSQPTWAPDGRRLAFTSWRDSNQEIYITDVEGSTIVNLT-N 193

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRS 403
             A    P WSP G  IAF         + +      +ER    D+  L+ P W+P G  
Sbjct: 194 HPAPDHSPAWSPDGRFIAFISDRDGGGNLHIADLVTGEERRAGPDNLGLRDPAWTPGGGL 253

Query: 404 LIFS------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           +  +      R+     G  L++  L+G    + +   Y   P W 
Sbjct: 254 MAVAPWALGERRFFSRQGVALFTPGLSGGTFVVASVHGYNR-PAWS 298


>gi|254443124|ref|ZP_05056600.1| hypothetical protein VDG1235_1358 [Verrucomicrobiae bacterium
           DG1235]
 gi|198257432|gb|EDY81740.1| hypothetical protein VDG1235_1358 [Verrucomicrobiae bacterium
           DG1235]
          Length = 355

 Score =  176 bits (447), Expect = 6e-42,   Method: Composition-based stats.
 Identities = 71/286 (24%), Positives = 129/286 (45%), Gaps = 11/286 (3%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D     +   +G F+ ++ F+SE   +      +CV D    N+  LT      +  P +
Sbjct: 78  DRAISKMRRTEGFFSGKLTFISEETGA----TEVCVSDLLFQNVTILTNDGVNAV-RPHW 132

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   + Y +Y       +Y +D R  R    + +++ + +  R+S +G R  + V  +
Sbjct: 133 SPDGNYIVYTSYKAG-FPDIYRLDLRAQR-RDVVADYKGLNMGARYSPDGSRIAMIVSGN 190

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              D++  +  S     LT +  +  + ++SPD +++VF SD  G  QLYVM ++G   +
Sbjct: 191 SNADVWVREA-SGEMRNLTRSRGLEAAPAWSPDGTRLVFSSDERGGPQLYVMPAHGGTSR 249

Query: 340 RISQDKEASYFDPVWSPQ-GDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTW 397
           R+  D      +P W+PQ  +LIAFT   G    I +      + R +  E  +   P W
Sbjct: 250 RLRTDISGYCAEPDWNPQFENLIAFTAAEGSGSQIAIYDSKAGKSRFVTTESGDAIEPQW 309

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              GR L+++ ++   +  K+    L G +  +    A  S P +V
Sbjct: 310 LNDGRHLVYTHRRANRSEIKIMDT-LTGASYVISGRRAKVSQPSFV 354



 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 69/176 (39%), Gaps = 5/176 (2%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +     ++  A ++   DL       LTN     +   +SPD + IV+ S + G   +Y 
Sbjct: 94  KLTFISEETGATEVCVSDLLFQNVTILTNDGVNAVRPHWSPDGNYIVYTSYKAGFPDIYR 153

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +    + ++ +  D +       +SP G  IA          + V +  G    L     
Sbjct: 154 LDLR-AQRRDVVADYKGLNMGARYSPDGSRIAMIVSGNSNADVWVREASGEMRNLTRSRG 212

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYASDPQWVG 444
              AP WSP G  L+FS  + G  G +LY +  +G     + T    Y ++P W  
Sbjct: 213 LEAAPAWSPDGTRLVFSSDERG--GPQLYVMPAHGGTSRRLRTDISGYCAEPDWNP 266


>gi|257459074|ref|ZP_05624193.1| protein TolB [Campylobacter gracilis RM3268]
 gi|257443459|gb|EEV18583.1| protein TolB [Campylobacter gracilis RM3268]
          Length = 415

 Score =  175 bits (445), Expect = 8e-42,   Method: Composition-based stats.
 Identities = 66/413 (15%), Positives = 164/413 (39%), Gaps = 17/413 (4%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDV 78
           LLL+L       +  A + +     N   + +     ++  E G K  +++  DL+    
Sbjct: 4   LLLILAFCSSIFAADATMSIVNEGVNLPKIVVQDASNLANSEFGNKFFKLMVGDLKVGAT 63

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F +  +  + Q   + D+       +      L+    + +    + ++ ++ +    + 
Sbjct: 64  FEVSDE--YLQSSYDADASSN----SGSSGAALIVRYAVSDKSSPMSLKAKVLEANSGRV 117

Query: 139 IIGKKFF-SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           +  K F  S+   +  +AH    +I + +     D+   ++ +S    +   ++ + V D
Sbjct: 118 MYEKSFTLSNAEKYPFLAHMAVSEIVKQLGYSNVDWMKEMILLSRYTST--RESEIMVAD 175

Query: 198 RDGANIRYLTPSRDQILFEPRF-SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
                 + +      +   P++ S  Q +  Y  Y +++   +Y  +       K     
Sbjct: 176 YTLTYQQVVLRG--GLNIFPKWASAAQNEFYYTYYVNKNTPAIYKFNLSNGSKSKIFTGH 233

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             M +A   S++G++ LI+    +  DIY  D+ S + +++T+   I+++ ++    S++
Sbjct: 234 -GMTIASDVSADGRKLLITNAPKDQPDIYLYDIASGSAKQITDYAGIDVNGNFIDGDSRV 292

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGV 375
            F SDR G   ++    NG + +++    + +      S  G+ + ++    G  F I +
Sbjct: 293 AFVSDRLGYPNVFATSINGGNVQQLVYHGKNNN---SISTNGNYVTYSSRDGGGGFNIYL 349

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +       R L        P +S  G S++F ++    +   +  ++ N   +
Sbjct: 350 ISTQTDMIRQLTASGKNMFPRFSSDGGSIMFIKQDGSGSSVGIIRVNENKSFQ 402


>gi|315637614|ref|ZP_07892820.1| translocation protein TolB [Arcobacter butzleri JV22]
 gi|315478068|gb|EFU68795.1| translocation protein TolB [Arcobacter butzleri JV22]
          Length = 439

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 70/437 (16%), Positives = 166/437 (37%), Gaps = 30/437 (6%)

Query: 3   LRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG 62
           +   + +++ +KI L + L+    F    +   + +         + +            
Sbjct: 1   MILNLKDKIMLKIFLFVSLMFCSVF--AEVDGHLDIVKKGMVLPKIVVTIATDSPEKGTL 58

Query: 63  GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
            K+ + +S DL  S  F++    +      + + +P      + G  +++     +E   
Sbjct: 59  SKIKKSLSDDLGISGHFDV----ATSTTQFSYNGMPDLS-LRNQGISLVINLSAEREAGG 113

Query: 123 RLRVEFRLWDVK--------DRKQIIGKKFFSS-PASWRKIAHTISDDIYQSITGEKGDF 173
              ++ +L+D+             ++ K F +S    +  +AH  +  I          +
Sbjct: 114 NYTLKTKLYDLNAVNALSGNTSGLVLEKNFTTSLEERFVFLAHKSAITINDYFKAPSIAW 173

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             +  FV  +V  G  K+ + + D      + +      +   P+++  +QK  Y T  +
Sbjct: 174 MDK--FVVFAVYDGPRKSDIMIGDYSLTYKKKVVTG--GLNIFPKWADKEQKTIYYTSYN 229

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            D   +  ++   +R+ + I +   M+     S +G + LI+       DI+  D+ +  
Sbjct: 230 YDKPTLVKLNI-YNRSKEVIMDSDGMLACSDVSKDGSKLLITASPTGQPDIFLYDVNTRT 288

Query: 294 TERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +++      I++   +  D  +IVF SDR G   ++  +   S  +R+      S  + 
Sbjct: 289 KKQVAGGPGWIDVGGQFVEDDKEIVFVSDRLGNPNIFKQRIGSSSVERMVF---HSKNNS 345

Query: 353 VWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
             +  G+ I F+        G+ F + ++       + L      Q P +SP G+S++F 
Sbjct: 346 SVTSNGNNIIFSSKDSDNEMGKSFNLYLISTRTDNLQRLTTQGVNQFPKFSPDGQSVLFI 405

Query: 408 RKKDGDTGSKLYSIDLN 424
           +     +   +  ++ N
Sbjct: 406 KTVGDASAVGIIRLEYN 422



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 73/209 (34%), Gaps = 35/209 (16%)

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
           + I + D +    D +  G+++L+T     +          L+DV  R     KK  +  
Sbjct: 246 EVIMDSDGMLACSDVSKDGSKLLITASPTGQPD------IFLYDVNTRT----KKQVAGG 295

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
             W  +     +D            +  I+FVS+ + +  I              R +  
Sbjct: 296 PGWIDVGGQFVED------------DKEIVFVSDRLGNPNIFKQRIGSSS---VERMVFH 340

Query: 209 SRDQILFEPRFSPNQQKVAYATYD----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           S++          N   + +++ D          +YL+ TR D   +     + +   P+
Sbjct: 341 SKNNSSVTS----NGNNIIFSSKDSDNEMGKSFNLYLISTRTDNLQRLTT--QGVNQFPK 394

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           FS +G+  L      +A  +  + L+ N 
Sbjct: 395 FSPDGQSVLFIKTVGDASAVGIIRLEYNK 423


>gi|152993347|ref|YP_001359068.1| translocation protein TolB [Sulfurovum sp. NBC37-1]
 gi|151425208|dbj|BAF72711.1| Tol biopolymer transport system component TolB [Sulfurovum sp.
           NBC37-1]
          Length = 412

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 75/423 (17%), Positives = 164/423 (38%), Gaps = 29/423 (6%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVF 79
           LL+L+      ++ A +K+  +  + S +++            GK+ +++  D + S  F
Sbjct: 4   LLILLFSIHLFAVDASMKIEKDVEHRSRIALV----DGSSVSNGKLFKILLSDFKISGHF 59

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
            L     +K   ++    P  +       + +V  R  +   + +++E RL    D  QI
Sbjct: 60  -LADSSLYKSNFSSGFIAPNLKS-----KEYIVKYRFTQA--NGVKLEIRLLKASDGSQI 111

Query: 140 IGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
             K +    +S    + H    DI + +      + +R  +V  S  +   ++ + + D 
Sbjct: 112 FEKSYAIQNSSKMPFLVHKAVYDINRVLKYPDIGWINR--YVVFSRYTAPKRSEILLADY 169

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
                + +      +   P+++ + QK  Y T     I  +  ++       K + +   
Sbjct: 170 TFTYQKVIIRG--GLNLFPKWADSAQKSFYYTSYAGLIPTLNKINIYTGSKSK-VASSEG 226

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           MI+    S +G + L+++  +   DIY + L + +  R+T    I+++  Y  + SQIVF
Sbjct: 227 MIVCSDVSPDGSKMLLTMSPEGQPDIYEMSLFTGSKTRVTKFNGIDVNGKYLGNGSQIVF 286

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------FA 372
            S+R G   ++    N +  +++      +         G+ I +    G        F 
Sbjct: 287 VSNRLGYANIFKKSINSAAVQQVVFHGRNNNAVDA---HGNKIIYCSREGNNAFGGNRFN 343

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + +   +G   R L    + Q P +S  G  +++ ++      S +  I+L      L  
Sbjct: 344 LYLTSANGGSSRPLTTTGSNQFPRFSTDGSVILYIKQNGNS--SSIGYINLGSSQSLLFP 401

Query: 433 TPA 435
              
Sbjct: 402 LGG 404


>gi|294505693|ref|YP_003569754.1| TolB protein precursor [Salinibacter ruber M8]
 gi|294342132|emb|CBH22796.1| TolB protein precursor [Salinibacter ruber M8]
          Length = 543

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 68/291 (23%), Positives = 116/291 (39%), Gaps = 29/291 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           ++ S         +  +  DG+N+R +T S   I   P +SP+  ++A+      D    
Sbjct: 254 IAFSSEDTGGDAEIYTVRPDGSNLRQVTNSATGI--SPTWSPDGSRIAFTADGGGDDAND 311

Query: 240 YLMDTRIDR-------APKRIGNFRSMILAPRFSSNGKRALISVQKDEA------MDIYS 286
            +   R D         P  + + R   +AP +S +G R   S   D          IY+
Sbjct: 312 PIATIRPDGSDLSPVTDPADVEDGRIADVAPEWSPSGDRIAFSRDPDTTARDTTEPRIYT 371

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--- 343
           VD   +   ++     I  + ++SPD S+I F S       ++ ++ +GSD ++++    
Sbjct: 372 VDPDGSDLRQVAEDKAIGFNPTWSPDGSRIAF-STPADPSVIFTIRPDGSDLRQVTDRSD 430

Query: 344 -DKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSN------LQA 394
            D  +    P WSP G  IAF         F I  +  DGS  + +    +        +
Sbjct: 431 IDGNSGDLAPAWSPDGSRIAFQSDRDGGSSFDIYTVDPDGSDLKQVTTAGDRDDRVDDIS 490

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
           P WSP G  ++F   +DG     +Y+I  +G   E + N       P W  
Sbjct: 491 PAWSPDGSRIVFGSNRDGSAVPDIYTIRPDGSELERITNNDRLDFGPAWSP 541



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 9/95 (9%)

Query: 359 DLIAFTKFS-GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           +LIAF+    G    I  ++ DGS  R +   +   +PTWSP G  + F+    GD  + 
Sbjct: 252 NLIAFSSEDTGGDAEIYTVRPDGSNLRQVTNSATGISPTWSPDGSRIAFTADGGGDDAND 311

Query: 418 -LYSIDLNGRNETLINTPAYASD-------PQWVG 444
            + +I  +G + + +  PA   D       P+W  
Sbjct: 312 PIATIRPDGSDLSPVTDPADVEDGRIADVAPEWSP 346


>gi|297620364|ref|YP_003708501.1| putative protein TolB [Waddlia chondrophila WSU 86-1044]
 gi|297375665|gb|ADI37495.1| putative protein TolB [Waddlia chondrophila WSU 86-1044]
          Length = 436

 Score =  174 bits (441), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 65/338 (19%), Positives = 123/338 (36%), Gaps = 23/338 (6%)

Query: 125 RVEFRLWDVKDRKQI-IGKKFFSS-PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            +  RL+     +   +G++  S   +  RKI H I+D I++++ G  G  ++R+L+   
Sbjct: 100 HISVRLFSSDGEEDFRLGQQHLSGYLSEDRKIIHRIADAIHRALFGADGIASTRLLYTVR 159

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP----NQQKVAYATYDDEDILR 238
           +V      + +   D DGAN   LT  +      P + P     Q +  +       I +
Sbjct: 160 TVEEKTEYSEIWQSDYDGANAMQLTSRQAGYCITPGYVPHLPGKQAESFFYVSYKTGIPK 219

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS---VDLQS--NA 293
           VY+         K +       L P  +    R           D++       +     
Sbjct: 220 VYIASLGEPIGRKMLT-LSGNQLMPAINRQRDRIAFISDVTGNPDLFIQEFSPEKGGIGK 278

Query: 294 TERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR------ISQDKE 346
              L +       S ++SPD  ++ F S++ G  ++Y+M               +     
Sbjct: 279 PRHLFSARYATQGSPTFSPDGFRLAFVSNKGGSPRVYLMNIPPQGTPLKEIEPILVTKVN 338

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLI 405
                P WSP G  +A+   +     I V       ER L +   N + P+W+ +   ++
Sbjct: 339 RENTAPCWSPDGTKLAYCSKTKGVRQIWVYDLLTGVERQLTDGPRNKENPSWASNSLHIV 398

Query: 406 FSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQW 442
           ++    G    +LY I+L   +   + +       P W
Sbjct: 399 YNTSDAG--NCELYLINLKQAKAVKITSGAGEKRFPSW 434


>gi|297183216|gb|ADI19356.1| periplasmic component of the tol biopolymer transport system
           [uncultured Chloroflexi bacterium HF0500_03M05]
          Length = 284

 Score =  174 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 11/252 (4%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L VM+  G + R +  S      +P++SPN  ++AY   + E+     +        P  
Sbjct: 42  LEVMEVSGTS-RQVLASASGTHRDPQWSPNDIRIAYIAENGEETYLYVINANGT--QPML 98

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + +     +   +S +G   + +V + E   IY  +       R T+T   + S  +S D
Sbjct: 99  LTSVPGNEIG-GWSPDGTSVVFAVSEGEEQGIYIRNPDGVNEFRRTDTP--DFSPVWSTD 155

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S +I F S R+G  ++YVM ++GS+Q R++ + EA  +D  WSP G+ + F         
Sbjct: 156 SERIAFLSRRDGNPEIYVMNTDGSNQFRLT-ETEALEYDISWSPNGERLLFVSERDGNAE 214

Query: 373 IGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           I + + +  SQ RL   +   + P WSP+G  + F+   D DT  +++ +D +G N+T +
Sbjct: 215 IYIAELESDSQVRLTHNEVKDEHPVWSPNGDKIAFTSHLDADT--EIFIMDSDGDNQTRL 272

Query: 432 NTP-AYASDPQW 442
               +  ++P W
Sbjct: 273 TNNESEDTNPSW 284



 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 12/223 (5%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI +++E+      +  L V++ +G     LT      +    +SP+   V +A   + +
Sbjct: 73  RIAYIAENG----EETYLYVINANGTQPMLLTSVPGNEIGG--WSPDGTSVVFA-VSEGE 125

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +Y+ +       +R         +P +S++ +R     ++D   +IY ++   +   
Sbjct: 126 EQGIYIRNPDGVNEFRRTDTP---DFSPVWSTDSERIAFLSRRDGNPEIYVMNTDGSNQF 182

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           RLT T  +    S+SP+  +++F S+R+G  ++Y+ +     Q R++ + E     PVWS
Sbjct: 183 RLTETEALEYDISWSPNGERLLFVSERDGNAEIYIAELESDSQVRLTHN-EVKDEHPVWS 241

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTW 397
           P GD IAFT        I +M  DG  +  L  + S    P+W
Sbjct: 242 PNGDKIAFTSHLDADTEIFIMDSDGDNQTRLTNNESEDTNPSW 284



 Score =  122 bits (307), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 6/199 (3%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             + + +        +P  SS+GK         + + +  +++   + + L +    +  
Sbjct: 5   GTSARNLTKSAIDEFSPVVSSDGKLVAFLSGSGDNIALEVMEVSGTSRQVLASASGTHRD 64

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SP+  +I + ++   +  LYV+ +NG+    ++           WSP G  + F   
Sbjct: 65  PQWSPNDIRIAYIAENGEETYLYVINANGTQPMLLTSVPGNEIGG--WSPDGTSVVFAVS 122

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            GE+  I +   DG  E    +  +  +P WS     + F  ++DG    ++Y ++ +G 
Sbjct: 123 EGEEQGIYIRNPDGVNEFRRTDTPDF-SPVWSTDSERIAFLSRRDG--NPEIYVMNTDGS 179

Query: 427 NE-TLINTPAYASDPQWVG 444
           N+  L  T A   D  W  
Sbjct: 180 NQFRLTETEALEYDISWSP 198



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 93/187 (49%), Gaps = 7/187 (3%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E G ++     V  +V  G  +  + + + DG N    T + D   F P +S + +++A
Sbjct: 105 NEIGGWSPDGTSVVFAVSEGEEQG-IYIRNPDGVNEFRRTDTPD---FSPVWSTDSERIA 160

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           + +  D +   +Y+M+T       R+    ++     +S NG+R L   ++D   +IY  
Sbjct: 161 FLSRRDGNP-EIYVMNTD-GSNQFRLTETEALEYDISWSPNGERLLFVSERDGNAEIYIA 218

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +L+S++  RLT+    +    +SP+  +I F S  +   ++++M S+G +Q R++ + E+
Sbjct: 219 ELESDSQVRLTHNEVKDEHPVWSPNGDKIAFTSHLDADTEIFIMDSDGDNQTRLT-NNES 277

Query: 348 SYFDPVW 354
              +P W
Sbjct: 278 EDTNPSW 284



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 6/158 (3%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +D    +   LT +     S   S D   + F S       L VM+ +G+  +++     
Sbjct: 1   MDSDGTSARNLTKSAIDEFSPVVSSDGKLVAFLSGSGDNIALEVMEVSGT-SRQVLASAS 59

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            ++ DP WSP    IA+   +GE+  + V+  +G+Q  LL      +   WSP G S++F
Sbjct: 60  GTHRDPQWSPNDIRIAYIAENGEETYLYVINANGTQPMLLTSVPGNEIGGWSPDGTSVVF 119

Query: 407 SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWV 443
           +  +  + G  +Y  + +G NE    +TP ++  P W 
Sbjct: 120 AVSEGEEQG--IYIRNPDGVNEFRRTDTPDFS--PVWS 153


>gi|154148092|ref|YP_001406273.1| translocation protein TolB [Campylobacter hominis ATCC BAA-381]
 gi|153804101|gb|ABS51108.1| protein TolB [Campylobacter hominis ATCC BAA-381]
          Length = 417

 Score =  174 bits (440), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 70/415 (16%), Positives = 160/415 (38%), Gaps = 15/415 (3%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQR 75
            L LL       F     A + +    +N   + +  +  ++   L  K  +++  DL+ 
Sbjct: 3   KLLLLFTFCVSLFAYVDDATMTITNKGSNLPKIVVQNSSMIANSSLNQKFFKLMVGDLKV 62

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
              F +  +  + +   + D        +  G  ++V  R        + ++ ++ D   
Sbjct: 63  GATFEVSDE--YFESSYDGDFRTNIS--SDSGTALIV--RYALSDASPMSLKAKVLDAIT 116

Query: 136 RKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            K +    F     S +  +AH    +I +++     D+   ++  S        ++ + 
Sbjct: 117 GKILYENSFSIEDKSKFPFLAHDAVSEIVKNLGYSNVDWMREMILFSRYTS--AKESEIL 174

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D      + +      +   P+++   Q   Y TY               + +  +I 
Sbjct: 175 IADYTLTYQKTVVRG--GLNIFPKWANKAQNAFYYTYYINKNTPAIFKYNLSNGSKSKIF 232

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             R M +A   S +G + LI+    +  DI+  +L S + +++TN   I+++ ++  + S
Sbjct: 233 TGRGMTIASDVSDDGSKLLITNAPKDQPDIFLYNLNSGSMKQITNYPGIDVNGNFVDNDS 292

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAI 373
           +IVF SDR G   ++    +G + +++    + +      S  G+ I ++   G   F I
Sbjct: 293 RIVFVSDRLGYPNIFAQSIDGGNVEQMVFQGKNNN---SISTHGNYIVYSSRDGGGSFNI 349

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            ++    +  R L  D     P +S  G S++F +  +  +   +  I+ N   +
Sbjct: 350 YLISTGTNLIRQLTADGKNMFPRFSSDGGSVMFIKHSNFGSSIGIIRINENKSFQ 404


>gi|269925257|ref|YP_003321880.1| WD40 domain protein beta Propeller [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269788917|gb|ACZ41058.1| WD40 domain protein beta Propeller [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 419

 Score =  173 bits (439), Expect = 5e-41,   Method: Composition-based stats.
 Identities = 61/280 (21%), Positives = 120/280 (42%), Gaps = 16/280 (5%)

Query: 174 NSRILFVSESVVSGI----IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           + RI F S+  V G         +  +  DG  +  LT         P ++P  +++A+ 
Sbjct: 147 SGRIAFSSDRPVPGRNNIRKNRDIYSIRADGTGLVRLT-GESSFDGMPSWAPTGEQIAFV 205

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +      L++++M++     P ++   + +   P +S +GK    ++ +D    I  +  
Sbjct: 206 SDRTGS-LQIWIMNSD-GSNPYQLTYGKIIAQDPDWSPDGKYIAYTLGRDTG--IAKIPA 261

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +      LT+  +   + ++SPD S+I F        Q++VM ++GS  ++I+ D    +
Sbjct: 262 KGGKPIVLTDLSYPQSAPAWSPDGSKITFMGKPGKYWQVFVMNADGSGLRQITHD-PTDH 320

Query: 350 FDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
             P W P G  I +     E     I +M  DG+  + +    +     P  SP GR ++
Sbjct: 321 RFPRWMPDGKRIVYNTRKSEHVIGQIFIMNADGTNVKQITMSTEGENGRPFPSPDGRYIV 380

Query: 406 FSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
           F+  +  D   ++Y +  +G   + L NT     +P W  
Sbjct: 381 FNSNRL-DNNWEIYIMRPDGSEVKRLTNTIGDDFEPCWSP 419



 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 92/231 (39%), Gaps = 15/231 (6%)

Query: 220 SPNQQKVAYATYDD-------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +P+  ++A+++               +Y +         R+    S    P ++  G++ 
Sbjct: 145 APSG-RIAFSSDRPVPGRNNIRKNRDIYSIRADGTGLV-RLTGESSFDGMPSWAPTGEQI 202

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                +  ++ I+ ++   +   +LT    I     +SPD   I +   R+    +  + 
Sbjct: 203 AFVSDRTGSLQIWIMNSDGSNPYQLTYGKIIAQDPDWSPDGKYIAYTLGRD--TGIAKIP 260

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SN 391
           + G     ++ D       P WSP G  I F    G+ + + VM  DGS  R +  D ++
Sbjct: 261 AKGGKPIVLT-DLSYPQSAPAWSPDGSKITFMGKPGKYWQVFVMNADGSGLRQITHDPTD 319

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--TPAYASDP 440
            + P W P G+ ++++ +K      +++ ++ +G N   I   T      P
Sbjct: 320 HRFPRWMPDGKRIVYNTRKSEHVIGQIFIMNADGTNVKQITMSTEGENGRP 370


>gi|320161659|ref|YP_004174884.1| putative protein kinase [Anaerolinea thermophila UNI-1]
 gi|319995513|dbj|BAJ64284.1| putative protein kinase [Anaerolinea thermophila UNI-1]
          Length = 710

 Score =  173 bits (438), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 68/299 (22%), Positives = 127/299 (42%), Gaps = 24/299 (8%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           ++       G   S I FVSE       +  + +M  DG N+R LT  R+    +P +SP
Sbjct: 417 VFTPTATPLGGGASEIAFVSERTG----QMQIWMMSADGKNLRQLTNMRNG-ACQPAWSP 471

Query: 222 NQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           +  K+A+ +      +  +   +YL+       P  + +       P +S +GK+   + 
Sbjct: 472 DGSKLAFISPCPGKREIYEGSAIYLLAMD-GSEPIPLPSSPEGDFDPAWSPDGKKLAFTS 530

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +     I+ +DLQ+     ++ + + ++  S+SP S QI F   R    Q+++M  +G 
Sbjct: 531 LRTGRPSIFVMDLQTLVAREISESRYSDLQPSWSPISRQIAFVR-RISNSQIWIMSEDGE 589

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM------KKDGSQERLLVEDS 390
           +Q R S   + + F P WS  G  I + +  G      ++      ++   + R+    +
Sbjct: 590 NQVRFSPPGDVTNFFPTWSWDGQAILYNQIVGGSKVPRLVGMRYEDRQSPREFRIPASGT 649

Query: 391 NLQAP--TW--SPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQWVG 444
               P  ++  SP G  + +    DG T   +Y + +NG  N  L   P++   P W  
Sbjct: 650 VDIGPVGSFTLSPDGFWVAYEGWPDG-TNHDIYLMTMNGATNIRLTTDPSFDYSPVWRP 707


>gi|213582179|ref|ZP_03364005.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 172

 Score =  172 bits (435), Expect = 1e-40,   Method: Composition-based stats.
 Identities = 51/175 (29%), Positives = 92/175 (52%), Gaps = 4/175 (2%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +++ +TG KG F +RI +V ++   G     L V D DG N +++     Q L  P +SP
Sbjct: 1   VFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRSPQPLMSPAWSP 58

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  K+AY T++        ++ T  + A +++ +F     AP FS +G +   ++ K  +
Sbjct: 59  DGSKLAYVTFESGR--SALVIQTLANGAVRQVASFPRHNGAPAFSPDGTKLAFALSKTGS 116

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y M  NG 
Sbjct: 117 LNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQVYKMNINGG 171



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 65/160 (40%), Gaps = 2/160 (1%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + ++AY    +       L  +  D   +  +      +++P +S +G +      +   
Sbjct: 13  RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGR 72

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +    L + A  ++ +    N + ++SPD +++ F   + G   LYVM       ++I
Sbjct: 73  SALVIQTLANGAVRQVASFPRHNGAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQI 132

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           + D  ++  +P W P    +AFT     +  +  M  +G 
Sbjct: 133 T-DGRSNNTEPTWFPDSQTLAFTSDQAGRPQVYKMNINGG 171



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 7/160 (4%)

Query: 270 KRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            R    VQ +     Y +   D        +  +    +S ++SPD S++ + +   G+ 
Sbjct: 14  TRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRS 73

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            L +        ++++     +   P +SP G  +AF         + VM     Q R +
Sbjct: 74  ALVIQTLANGAVRQVASFPRHN-GAPAFSPDGTKLAFALSKTGSLNLYVMDLASGQIRQI 132

Query: 387 VED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +  SN   PTW P  ++L F+  + G    ++Y +++NG
Sbjct: 133 TDGRSNNTEPTWFPDSQTLAFTSDQAGR--PQVYKMNING 170


>gi|157737824|ref|YP_001490508.1| translocation protein TolB [Arcobacter butzleri RM4018]
 gi|157699678|gb|ABV67838.1| colicin tolerance-like protein (tolB) [Arcobacter butzleri RM4018]
          Length = 430

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 70/427 (16%), Positives = 161/427 (37%), Gaps = 30/427 (7%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +KI L + L+    F    +   + +         + +             K+ + +S D
Sbjct: 2   LKIFLFVSLMFCSVF--AEVDGHLDIVKKGMVLPKIVVTIATDSPEKGTLSKIKKSLSDD 59

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L  S  F++    +      + + +P      + G  +++     +E      ++ +L+D
Sbjct: 60  LGISGHFDV----ATSTTQFSYNGMPDLS-LRNQGISLVINLSAEREAGGNYTLKTKLYD 114

Query: 133 V--------KDRKQIIGKKFFSS-PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           +             ++ K F +S    +  +AH  +  I          +  +  FV  +
Sbjct: 115 LNAVNALSGNTSGLVLEKNFTTSLEERFVFLAHKSAITINDYFKAPSIAWMDK--FVVFA 172

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V  G  K+ + + D      + +      +   P+++  +QK  Y T  + D   +  ++
Sbjct: 173 VYDGPRKSDIMIGDYSLTYKKKVVTG--GLNIFPKWADKEQKTIYYTSYNYDKPTLVKLN 230

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF- 302
              +R+ + I +   M+     S +G + LI+       DI+  D+ +   +++      
Sbjct: 231 I-YNRSKEVIMDSDGMLACSDVSKDGSKLLITASPTGQPDIFLYDVNTRTKKQVAGGPGW 289

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I++   +  D  +IVF SDR G   ++  +   S  +R+      S  +   +  G+ I 
Sbjct: 290 IDVGGQFVEDDKEIVFVSDRLGNPNIFKQRIGSSSVERMVF---HSKNNSSVTSNGNNII 346

Query: 363 FTKFS-----GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           F+        G+ F + ++       + L      Q P +SP G+S++F +     +   
Sbjct: 347 FSSKDSDNEMGKSFNLYLISTRTDNLQRLTTQGVNQFPKFSPDGQSVLFIKTVGDASAVG 406

Query: 418 LYSIDLN 424
           +  ++ N
Sbjct: 407 IIRLEYN 413



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 73/209 (34%), Gaps = 35/209 (16%)

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
           + I + D +    D +  G+++L+T     +          L+DV  R     KK  +  
Sbjct: 237 EVIMDSDGMLACSDVSKDGSKLLITASPTGQPD------IFLYDVNTRT----KKQVAGG 286

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
             W  +     +D            +  I+FVS+ + +  I              R +  
Sbjct: 287 PGWIDVGGQFVED------------DKEIVFVSDRLGNPNIFKQRIGSSS---VERMVFH 331

Query: 209 SRDQILFEPRFSPNQQKVAYATYD----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           S++          N   + +++ D          +YL+ TR D   +     + +   P+
Sbjct: 332 SKNNSSVTS----NGNNIIFSSKDSDNEMGKSFNLYLISTRTDNLQRLTT--QGVNQFPK 385

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           FS +G+  L      +A  +  + L+ N 
Sbjct: 386 FSPDGQSVLFIKTVGDASAVGIIRLEYNK 414


>gi|206889249|ref|YP_002248789.1| protein TolB, putative [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741187|gb|ACI20244.1| protein TolB, putative [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 395

 Score =  170 bits (430), Expect = 5e-40,   Method: Composition-based stats.
 Identities = 75/422 (17%), Positives = 165/422 (39%), Gaps = 36/422 (8%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           + +++   L L++   F        + +     +   +++A   F  +  L       V 
Sbjct: 1   MKLRLIATLFLIISIVFIGPVFAEKIYLDITQPSIKKLTLAMEGFEKVPVLFNT----VK 56

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
           ++L+ ++ F +     +K +  +P        W S   +++V    +       ++  ++
Sbjct: 57  ENLEFTEYFRIYGPFPYKGEGFDPSL------WKSSDVEIVVRAETLN------KISIQV 104

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           + V     I  K++  +   +    + IS DIY+ +TG+K  F +R +F+          
Sbjct: 105 FTVTASSPIFAKEYPLNDNEY--TGNLISSDIYKLLTGKKAPFFNRFIFIK----KFSKS 158

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             + + + +G  I      RD I    R      K+ Y++ +      + + D       
Sbjct: 159 MGIFISNWNGKTIHDTGIRRDIIS---RVVLRGNKIFYSSLE-GKFWHIEIYDLSTRLNK 214

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + I +   + L       G    I ++ D  +    +   S  +  + ++ +I  S  + 
Sbjct: 215 EIIKSKALLQLGDVI---GDSQFIYLENDGEISQIKITDLSGKSRTVASSRWIESSPRW- 270

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             +SQI F S+R G  Q+Y     G+  +RI+     +  +P  SP G  +AF+   G  
Sbjct: 271 -HASQIFFVSNRAGSPQIYQA-VEGAGARRITFQGRYN-TEPSISPDGSKLAFSSLVGG- 326

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           F I ++      +  + ++ N + P++ P G  L     + G    ++Y I  +G  +  
Sbjct: 327 FQIYILDLLSGTQNQITKEGNNEQPSFCPDGNFLTIMSDRRGKK--EIYLISQDGLIQKP 384

Query: 431 IN 432
           + 
Sbjct: 385 LT 386



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            S+I FVS    S  I  ++     +GA  R +T  + +   EP  SP+  K+A+++   
Sbjct: 272 ASQIFFVSNRAGSPQIYQAV-----EGAGARRIT-FQGRYNTEPSISPDGSKLAFSSLVG 325

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               ++Y++D       +           P F  +G    I   +    +IY +      
Sbjct: 326 G--FQIYILDLLSGTQNQI--TKEGNNEQPSFCPDGNFLTIMSDRRGKKEIYLISQDGLI 381

Query: 294 TERLTNT 300
            + LT  
Sbjct: 382 QKPLTIG 388


>gi|159897506|ref|YP_001543753.1| WD40 domain-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159890545|gb|ABX03625.1| WD40 domain protein beta Propeller [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 316

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 59/247 (23%), Positives = 112/247 (45%), Gaps = 12/247 (4%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +  +      L  P      Q++A+            ++       P+ +     + + P
Sbjct: 29  QPTSLPSSVPLATPTVGEAPQRLAFVANQINRG--TIMISGLDANPPQLLNPDFPLAIDP 86

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +S +G      VQ  +  ++Y      +   ++TN    + S S+SPD  Q+ F+S+R 
Sbjct: 87  TWSPDGNELAFVVQDSDGFNMYISSADGSNLFQVTNQPGDDQSPSWSPDGQQLAFQSNRS 146

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMK 377
           G ++LY++  +GS+ ++++ D  A  + P WSP G LIAFT   G          + V++
Sbjct: 147 GNDELYLINRDGSNLRQLTND-PARDWQPSWSPDGSLIAFTSDRGAQTPDGWNDQLYVIQ 205

Query: 378 KDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            DG   + L E     + P WSP  + L++         + +Y+++ +G + TL+   A+
Sbjct: 206 PDGQGLKYLTEGFGRARHPAWSPDSQQLVYVVGGGDVGSNSIYTVNRDGSDPTLLYANAF 265

Query: 437 ASDPQWV 443
             DPQW+
Sbjct: 266 --DPQWL 270



 Score =  155 bits (391), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 65/278 (23%), Positives = 117/278 (42%), Gaps = 20/278 (7%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T   G+   R+ FV+  +  G    ++ +   D AN   L      +  +P +SP+  ++
Sbjct: 41  TPTVGEAPQRLAFVANQINRG----TIMISGLD-ANPPQLLNPDFPLAIDPTWSPDGNEL 95

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A+   D  D   +Y+  +       ++ N      +P +S +G++      +    ++Y 
Sbjct: 96  AFVVQD-SDGFNMYI-SSADGSNLFQVTNQPGDDQSPSWSPDGQQLAFQSNRSGNDELYL 153

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQKR 340
           ++   +   +LTN    +   S+SPD S I F SDR         +QLYV+Q +G   K 
Sbjct: 154 INRDGSNLRQLTNDPARDWQPSWSPDGSLIAFTSDRGAQTPDGWNDQLYVIQPDGQGLKY 213

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWS 398
           ++ +       P WSP    + +    G+    +I  + +DGS   LL   +N   P W 
Sbjct: 214 LT-EGFGRARHPAWSPDSQQLVYVVGGGDVGSNSIYTVNRDGSDPTLLY--ANAFDPQWL 270

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
              R L F+   +    + L  +DLN    ++  T A 
Sbjct: 271 -DQRML-FTTYDEQTFHTALRILDLNTLEVSVPITMAD 306



 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 74/181 (40%), Gaps = 7/181 (3%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +R      +     I    L +N  + L     + I  ++SPD +++ F         +Y
Sbjct: 49  QRLAFVANQINRGTIMISGLDANPPQLLNPDFPLAIDPTWSPDGNELAFVVQDSDGFNMY 108

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +  ++GS+  +++ ++      P WSP G  +AF         + ++ +DGS  R L  D
Sbjct: 109 ISSADGSNLFQVT-NQPGDDQSPSWSPDGQQLAFQSNRSGNDELYLINRDGSNLRQLTND 167

Query: 390 -SNLQAPTWSPSGRSLIFSRKKDGDT----GSKLYSIDLNGRNETLINTP-AYASDPQWV 443
            +    P+WSP G  + F+  +   T      +LY I  +G+    +      A  P W 
Sbjct: 168 PARDWQPSWSPDGSLIAFTSDRGAQTPDGWNDQLYVIQPDGQGLKYLTEGFGRARHPAWS 227

Query: 444 G 444
            
Sbjct: 228 P 228


>gi|255321984|ref|ZP_05363134.1| protein TolB [Campylobacter showae RM3277]
 gi|255301088|gb|EET80355.1| protein TolB [Campylobacter showae RM3277]
          Length = 424

 Score =  169 bits (428), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 75/421 (17%), Positives = 161/421 (38%), Gaps = 24/421 (5%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF---VSIDELGGKVSEVVSKDLQR 75
           +LL L    +  ++ A + V  N     P  I        V      GK  +++  DL+ 
Sbjct: 4   ILLFLAFASWLFAVDATISV-VNKGLALP-KIVLQDATTAVGDQTFKGKFHKIMLGDLKV 61

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  F ++ +  +       DS       +  GAQ++    +       L +  +L + K 
Sbjct: 62  SSDFEVVDE--YIASSYEGDSNTNVM--SEKGAQLIFRYALEGSPNSPLSLRVKLINAKT 117

Query: 136 RKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
                 K +  +  A +  IAH    ++   +     ++  +  F+  +  +G  ++ + 
Sbjct: 118 ATTQYEKIYNMNDGAKYPFIAHKAIVELINELKMPPVNWMEK--FIIFAKGTGSKQSEIV 175

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D      + L      +   P++    Q   Y +      L +Y  D    +  K + 
Sbjct: 176 IADYTLTYQKVLVRG--GLNIFPKWVGADQSAFYYSDYSGKNLVLYRYDVASGQKTKILD 233

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +   M++A   S NG + L+++   +  DIY  DL S    ++TN   I+++ ++     
Sbjct: 234 SKGGMLIASDVSQNGDKILLTMAPQDQPDIYIYDLNSKRLSQVTNYSGIDVNGNFVDGDR 293

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---- 370
           ++VF SDR G   ++    +GS  +++    + +     +    + I ++     K    
Sbjct: 294 RVVFVSDRLGYPNVFAQNVDGSGFEQLVYHGKNNNSVSTYQ---NYIVYSSREDGKSSFG 350

Query: 371 ---FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              F I ++       R L        P +S  G+S++F ++  G +   +  ++ N   
Sbjct: 351 TRDFNIYMISTQTDYIRQLTASGKNLYPRFSSDGQSVVFIKELGGQSSLGIIRVNENKSF 410

Query: 428 E 428
           +
Sbjct: 411 Q 411


>gi|223038622|ref|ZP_03608915.1| protein TolB [Campylobacter rectus RM3267]
 gi|222880024|gb|EEF15112.1| protein TolB [Campylobacter rectus RM3267]
          Length = 424

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 76/424 (17%), Positives = 162/424 (38%), Gaps = 26/424 (6%)

Query: 16  NLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF---VSIDELGGKVSEVVSKD 72
            + L L   G  F  ++ A + V  N     P  I        V      GK  +++  D
Sbjct: 3   KILLFLAFAGWLF--AVDATISV-INKGLALP-KIVLQDATTAVGDQAFKGKFHKIMLGD 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  F ++ +  +       DS       +  GAQ++    +       L +  +L +
Sbjct: 59  LKVSSDFEVVDE--YIASSYEGDSNTNVM--SEKGAQLIFRYALEGSPTSPLSLRVKLIN 114

Query: 133 VKDRKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
            K       K +  +  A +  IAH    ++   +     ++  +  F+  +  +G  ++
Sbjct: 115 AKTATTQYEKIYNMNDGAKYPFIAHKAVVELINELKMPAVNWMEK--FIIFAKGTGSKQS 172

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + + D      + L      +   P++    Q+  Y +      L +Y  D    +  K
Sbjct: 173 EIVIADYTLTYQKVLVRG--GLNIFPKWIGADQRAFYYSDYSGAKLVLYRYDVASGQKTK 230

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            + +   M++A   S NG + L+++   +  DIY  DL S    ++TN   I+++ ++  
Sbjct: 231 ILDSRGGMLIASDVSQNGDKILLTMAPQDQPDIYIYDLNSKRLSQITNYSGIDVNGNFVD 290

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
              ++VF SDR G   ++    +GS  +++    + +     +    + I ++     K 
Sbjct: 291 GDRRVVFVSDRLGYPNVFAQNVDGSGFEQMVYHGKNNNSVSTYQ---NYIVYSSREDGKS 347

Query: 371 ------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 F I ++       R L        P +S  G+S++F ++  G +   +  ++ N
Sbjct: 348 GFGTRDFNIYMISTQTDYIRQLTASGKNLYPRFSSDGQSVVFIKELGGQSSLGIIRVNEN 407

Query: 425 GRNE 428
              +
Sbjct: 408 KSFQ 411


>gi|283955278|ref|ZP_06372778.1| putative tolB protein [Campylobacter jejuni subsp. jejuni 414]
 gi|283793192|gb|EFC31961.1| putative tolB protein [Campylobacter jejuni subsp. jejuni 414]
          Length = 402

 Score =  169 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 68/416 (16%), Positives = 160/416 (38%), Gaps = 35/416 (8%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           MK  L + LV +G  +       + +  +      + +     +S + L      ++  D
Sbjct: 1   MKKILAIFLVFLGTLWAE--DPVIDIVNSGIVLPKIIVKDNSNLSDENLKKSFYNIIVND 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  F +++  + +   T    + +  +  SL        ++   G ++    + L  
Sbjct: 59  LKVSSNFEVVANAAEESNYTFEYVLNKNGNTLSLNV------KIKAGGSNKSEQTYTL-- 110

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                        +    +  +AH         +     D+    + ++ +  S   K+ 
Sbjct: 111 -------------NGLEQYPFLAHKSVKASVNVLGLAPVDWMDHKILIARNSSS--KKSQ 155

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D      + +      +   P++   +Q + Y T  D D   +Y  D   ++A K 
Sbjct: 156 IIMTDYTLTYQKIIVDG--GLNLFPKWGNKEQTLFYYTAYDYDKPTLYRYDLNTNKASKV 213

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SP 311
           + +   M++A   S++G + L+++   +  D+Y  DL +    +LTN   I+++ ++   
Sbjct: 214 LSSG-GMVVASDVSADGSKLLVTMAPKDQPDVYLYDLNTKNLRQLTNYSGIDVNGNFIGS 272

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           D S++VF SDR G   +++   N +  +++      +      S   D + ++     + 
Sbjct: 273 DDSKVVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNN---SAVSTYKDFLVYSSREPNQV 329

Query: 371 --FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F I +M  +    R L  +     P +S  G S++F +     +   +  ++ N
Sbjct: 330 GVFNIYLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNAN 385


>gi|153951205|ref|YP_001397366.1| translocation protein TolB [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152938651|gb|ABS43392.1| putative tolB protein [Campylobacter jejuni subsp. doylei 269.97]
          Length = 402

 Score =  168 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 70/416 (16%), Positives = 160/416 (38%), Gaps = 35/416 (8%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           MK  L + LV +G  +       + V  +      + +     +S + L      ++  D
Sbjct: 1   MKKILAIFLVFLGSLWAE--DPVIDVVNSGVVLPKIIVKDNSNLSDENLKKSFYNIIVND 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  F +++  +     T   ++ +  +  SL        ++   G D+    + L  
Sbjct: 59  LKVSSNFEVVANATETSNYTFEYALNKNGNTLSLNV------KIKAGGSDKSEQTYTL-- 110

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                        +    +  +AH        ++     D+    + ++ +  S   K+ 
Sbjct: 111 -------------NGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSS--KKSQ 155

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D      + +      +   P++   +Q + Y T  D D   +Y  D   ++A K 
Sbjct: 156 IIMADYTLTYQKVIVDG--GLNLFPKWGNKEQTLFYYTAYDHDRPTLYRYDLNTNKASKI 213

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SP 311
           + +   M++A   S +G + L+++   +  D+Y  DL +    +LTN   I+++ ++   
Sbjct: 214 LSSG-GMVVASDVSVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGS 272

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           D S++VF SDR G   +++   N +  +++      +      S   D + ++     + 
Sbjct: 273 DDSKVVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNN---SAVSTYKDFLVYSSREPNQA 329

Query: 371 --FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F I +M  +    R L  +     P +S  G S++F +     +   +  ++ N
Sbjct: 330 GVFNIYLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNAN 385


>gi|317011325|gb|ADU85072.1| translocation protein TolB [Helicobacter pylori SouthAfrica7]
          Length = 417

 Score =  167 bits (424), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 143/369 (38%), Gaps = 24/369 (6%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           K+ EV++ DL+ S  F++                  + +      +++V   V  E  ++
Sbjct: 48  KLHEVLANDLKTSQHFDV--------SPNKEQGAINYAELKDKKFELVVLVSVAVENGNK 99

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           +    +L+DV     +    +    A      AH ++  +   +      +  R++  S+
Sbjct: 100 IS-RLKLYDVNTSALVKTFDYPILSADLYPFAAHNMAIVVNDHLKAPSIAWMKRLIVFSK 158

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +  GI   +L          +      +++   PR++  +Q   Y T   E    +   
Sbjct: 159 YMGPGITNIALADYTM---RYQKEIIKNNRLNIFPRWANAEQTEFYYTQYGERKPMILKY 215

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +     ++I + + M +    SS+G + L+S+  D   D+Y  D     + ++T+   
Sbjct: 216 NIQKATH-EKITSSQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTSTKITHYPG 274

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLI 361
           I++S  +  D   + F SDR G   +Y+ +       +++  +  ++     +    D I
Sbjct: 275 IDVSGVFLEDDKSMAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSI 331

Query: 362 AFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +             F + ++  +    R L  + + Q P +S  G+++++ +K   +  
Sbjct: 332 VYVSRENLNEFGKTVFNLNLITLNSKYIRRLTVNGSNQMPRFSIDGKNIMYIKKTPQEYA 391

Query: 416 SKLYSIDLN 424
             L  +D N
Sbjct: 392 MGLILLDYN 400


>gi|149199226|ref|ZP_01876264.1| WD40-like Beta Propeller [Lentisphaera araneosa HTCC2155]
 gi|149137651|gb|EDM26066.1| WD40-like Beta Propeller [Lentisphaera araneosa HTCC2155]
          Length = 407

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 77/342 (22%), Positives = 143/342 (41%), Gaps = 31/342 (9%)

Query: 121 KDRLRVEFRLWDVKDRKQI---IGKKFFSSPASWRKIAHTISDDIYQSITG-----EKGD 172
               +V+ RL D  ++                 W+  A  I D +           +   
Sbjct: 74  SGYPKVQVRLLDKLNQTVDNCNFDINLQKVSEQWQ--ASLIVDQVLTRFFKSQRFTQPAL 131

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
             S+I F +        K  + + D DG N+R  T  +  I   PR+SP+ + + Y  Y 
Sbjct: 132 TTSQIAFCA----RVNGKKEIYLCDLDGNNLRKKTNFKS-ITALPRWSPDNRYLVYTVYG 186

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS- 291
            +    ++  D   ++  + + ++R M     F   G   ++++ K  ++D+Y +DL + 
Sbjct: 187 -KASTNIFQTDLNSNKH-RILSHYRGMNTGAAFRPKGNAIVMTLSKGNSVDLYWMDLNNI 244

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREG------KEQLYVMQSNGSDQKRISQDK 345
             T RLT T  +  S  +SP  +QI + S            +LYVM ++    K +  + 
Sbjct: 245 GKTGRLTKTTSLESSPVFSPSGAQICYVSSSVSSSGKVSTPRLYVMNASKLTTKPL-FND 303

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVED-SNLQAPTWSPSGR 402
            +    P WS   +L+ ++K  G ++ I           E+++ +   + +AP+WSP GR
Sbjct: 304 RSERVSPDWSKTSNLLVYSKKMGRQYVIATCDPKNPSGTEKIISKTAGHWEAPSWSPDGR 363

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWV 443
            ++ +R   G+   +LY +D   +    INT   + S P W 
Sbjct: 364 HIVCTRDTGGEK--QLYIVDTLYKTSRKINTTLKHCSSPSWS 403


>gi|57237119|ref|YP_178131.1| translocation protein TolB [Campylobacter jejuni RM1221]
 gi|205356487|ref|ZP_03223251.1| periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421]
 gi|67461888|sp|Q5HX54|TOLB_CAMJR RecName: Full=Protein tolB; Flags: Precursor
 gi|57165923|gb|AAW34702.1| tolB protein, putative [Campylobacter jejuni RM1221]
 gi|205345674|gb|EDZ32313.1| periplasmic protein [Campylobacter jejuni subsp. jejuni CG8421]
 gi|315057552|gb|ADT71881.1| tolB protein precursor [Campylobacter jejuni subsp. jejuni S3]
          Length = 402

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 69/416 (16%), Positives = 160/416 (38%), Gaps = 35/416 (8%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           MK  + + LV +G  +       + V  +      + +     +S + L      ++  D
Sbjct: 1   MKKIVAIFLVFLGSLWAE--DPVIDVVNSGVVLPKIIVKDNSNLSDENLKKSFYNIIVND 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  F +++  +     T   ++ +  +  SL        ++   G D+    + L  
Sbjct: 59  LKVSSNFEVVANATETSNYTFEYTLNKNGNTLSLNV------KIKAGGSDKSEQTYTL-- 110

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                        +    +  +AH        ++     D+    + ++ +  S   K+ 
Sbjct: 111 -------------NGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSS--KKSQ 155

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D      + +      +   P++   +Q + Y T  D D   +Y  D   ++A K 
Sbjct: 156 IIMADYTLTYQKVIVDG--GLNLFPKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKI 213

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SP 311
           + +   M++A   S +G + L+++   +  D+Y  DL +    +LTN   I+++ ++   
Sbjct: 214 LSSG-GMVVASDVSVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGS 272

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           D S++VF SDR G   +++   N +  +++      +      S   D + ++     + 
Sbjct: 273 DDSKVVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNN---SAVSTYKDFLVYSSREPNQA 329

Query: 371 --FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F I +M  +    R L  +     P +S  G S++F +     +   +  ++ N
Sbjct: 330 GVFNIYLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNAN 385


>gi|157414425|ref|YP_001481681.1| translocation protein TolB [Campylobacter jejuni subsp. jejuni
           81116]
 gi|283955556|ref|ZP_06373051.1| TolB protein, putative [Campylobacter jejuni subsp. jejuni 1336]
 gi|157385389|gb|ABV51704.1| TolB protein, putative [Campylobacter jejuni subsp. jejuni 81116]
 gi|283793017|gb|EFC31791.1| TolB protein, putative [Campylobacter jejuni subsp. jejuni 1336]
 gi|307747069|gb|ADN90339.1| Protein tolB [Campylobacter jejuni subsp. jejuni M1]
 gi|315931506|gb|EFV10473.1| tol-Pal system beta propeller repeat protein TolB [Campylobacter
           jejuni subsp. jejuni 327]
          Length = 402

 Score =  167 bits (422), Expect = 5e-39,   Method: Composition-based stats.
 Identities = 69/416 (16%), Positives = 160/416 (38%), Gaps = 35/416 (8%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           MK  + + LV +G  +       + V  +      + +     +S + L      ++  D
Sbjct: 1   MKKIVAIFLVFLGSLWAE--DPVIDVVNSGVVLPKIIVKDNSNLSDENLKKSFYNIIVND 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  F +++  +     T   ++ +  +  SL        ++   G D+    + L  
Sbjct: 59  LKVSSNFEVVANATETSNYTFEYALNKNGNTLSLNV------KIKAGGSDKSEQTYTL-- 110

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                        +    +  +AH        ++     D+    + ++ +  S   K+ 
Sbjct: 111 -------------NGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSS--KKSQ 155

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D      + +      +   P++   +Q + Y T  D D   +Y  D   ++A K 
Sbjct: 156 IIMADYTLTYQKVIVDG--GLNLFPKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKI 213

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SP 311
           + +   M++A   S +G + L+++   +  D+Y  DL +    +LTN   I+++ ++   
Sbjct: 214 LSSG-GMVVASDVSVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGS 272

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           D S++VF SDR G   +++   N +  +++      +      S   D + ++     + 
Sbjct: 273 DDSKVVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNN---SAVSTYKDFLVYSSREPNQA 329

Query: 371 --FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F I +M  +    R L  +     P +S  G S++F +     +   +  ++ N
Sbjct: 330 GVFNIYLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNAN 385


>gi|298676136|ref|YP_003727885.1| APHP domain-containing protein [Methanohalobium evestigatum Z-7303]
 gi|298289124|gb|ADI75089.1| APHP domain protein [Methanohalobium evestigatum Z-7303]
          Length = 1914

 Score =  166 bits (421), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 14/251 (5%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR- 238
           +     +     ++ +M+ DG++   LT           +SP+  K+ Y   D+ D+   
Sbjct: 557 ILYKKDNTNGWYNVWIMNSDGSSQTALTNDAQSECAV--WSPSGSKIVYKHSDNSDLPED 614

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V +M+         +   +       +S +G +  +S        I  ++   +    ++
Sbjct: 615 VIIMNPDGSNKETILTGQKYANRF-SWSPDGSKIAVSG-HIGNQGIRIINADGSGLTEIS 672

Query: 299 NTLF-INISAS----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              F           +SPD S+IV+ SD  G   +Y +  +G+D+ +++ +  A   D  
Sbjct: 673 QGYFRPQTQPWQSQIWSPDGSKIVYHSDENGNRDIYTINIDGTDRTQLTTNS-AKDTDSF 731

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG 412
           +SP G  I F         I +M  DGS +  L    ++   PTW+P G  + FS  + G
Sbjct: 732 FSPDGSKIVFVSNREGNNDIWMMNVDGSNKTQLTVNSADDMYPTWNPDGTKIAFSSNRAG 791

Query: 413 DTGSKLYSIDL 423
                ++ I+L
Sbjct: 792 --NYDIWLIEL 800



 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 54/274 (19%), Positives = 106/274 (38%), Gaps = 14/274 (5%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
            V    +    K  +  +  D      +  +   I   PR+SP+  K+ Y   +      
Sbjct: 511 IVFGKSIPTEEKYDIYKVSVD-NKYESVLTNLPNIEGHPRWSPDGNKILYKKDNTNGWYN 569

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATER 296
           V++M++          + +S      +S +G + +   S   D   D+  ++   +  E 
Sbjct: 570 VWIMNSDGSSQTALTNDAQSE--CAVWSPSGSKIVYKHSDNSDLPEDVIIMNPDGSNKET 627

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---- 352
           +          S+SPD S+I   S   G + + ++ ++GS    ISQ        P    
Sbjct: 628 ILTGQKYANRFSWSPDGSKIA-VSGHIGNQGIRIINADGSGLTEISQGYFRPQTQPWQSQ 686

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKD 411
           +WSP G  I +         I  +  DG+    L  +S     ++ SP G  ++F   ++
Sbjct: 687 IWSPDGSKIVYHSDENGNRDIYTINIDGTDRTQLTTNSAKDTDSFFSPDGSKIVFVSNRE 746

Query: 412 GDTGSKLYSIDLNGRNETLINTP-AYASDPQWVG 444
           G   + ++ ++++G N+T +    A    P W  
Sbjct: 747 G--NNDIWMMNVDGSNKTQLTVNSADDMYPTWNP 778



 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 96/207 (46%), Gaps = 8/207 (3%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S+I++         +   + +M+ DG+N   +   +        +SP+  K+A + +   
Sbjct: 599 SKIVYKHSDNSD--LPEDVIIMNPDGSNKETILTGQKYANRF-SWSPDGSKIAVSGHIGN 655

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSNGKRALISVQKDEAMDIYSVDLQS 291
             +R+   D        + G FR       +  +S +G + +    ++   DIY++++  
Sbjct: 656 QGIRIINADGSGLTEISQ-GYFRPQTQPWQSQIWSPDGSKIVYHSDENGNRDIYTINIDG 714

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               +LT     +  + +SPD S+IVF S+REG   +++M  +GS++ +++ +  A    
Sbjct: 715 TDRTQLTTNSAKDTDSFFSPDGSKIVFVSNREGNNDIWMMNVDGSNKTQLTVNS-ADDMY 773

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           P W+P G  IAF+      + I +++ 
Sbjct: 774 PTWNPDGTKIAFSSNRAGNYDIWLIEL 800



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 56/297 (18%), Positives = 98/297 (32%), Gaps = 29/297 (9%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG-------ANIRYLTPSRD 211
           +D          G  N+ + FV      G           DG        N       + 
Sbjct: 364 ADVNVLQGGSPSGWCNAYVSFVDPDNGWGK-HYGFVGFGADGIIKNDIDYNFNQWYHVKI 422

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +            +V  A  DD+ I     +         R+    S            R
Sbjct: 423 ETDMI-------NRVYSAWIDDKLIGSNLPISEDGYYKGIRLSGENSGDT---------R 466

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--REGKEQLY 329
            L    K       S +      E+ T     + +  +SP  ++IVF      E K  +Y
Sbjct: 467 ILFDNVKVYEYGDSSYNGIVKKIEQFTFNPEKDSNPVWSPTGNEIVFGKSIPTEEKYDIY 526

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVE 388
            +  +   +  ++         P WSP G+ I + K  +   + + +M  DGS +  L  
Sbjct: 527 KVSVDNKYESVLTNLPN-IEGHPRWSPDGNKILYKKDNTNGWYNVWIMNSDGSSQTALTN 585

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
           D+  +   WSPSG  +++    + D    +  ++ +G N ET++    YA+   W  
Sbjct: 586 DAQSECAVWSPSGSKIVYKHSDNSDLPEDVIIMNPDGSNKETILTGQKYANRFSWSP 642



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 77/187 (41%), Gaps = 17/187 (9%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S+I++ S+   +      +  ++ DG + R    +      +  FSP+  K+ + +  + 
Sbjct: 693 SKIVYHSDENGN----RDIYTINIDGTD-RTQLTTNSAKDTDSFFSPDGSKIVFVSNREG 747

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNA 293
           +   +++M+        ++    +  + P ++ +G +   S  +    DI+ ++L +   
Sbjct: 748 NN-DIWMMNVD-GSNKTQLTVNSADDMYPTWNPDGTKIAFSSNRAGNYDIWLIELKEDIN 805

Query: 294 TERLTNTLFINISASYSPDSSQ---IVFESDREGKEQLYVMQSNGSDQKRISQDKE-ASY 349
              + N   I ++ S   + +    IV  SD +G    Y  + +G     I+ + +  ++
Sbjct: 806 HRPVIND--IQVNPSTIFEGNSCDIIVDASDPDGDNLNYYYEPSGGK---ITGEGDKVTW 860

Query: 350 FDPVWSP 356
                SP
Sbjct: 861 TSDKASP 867


>gi|86151349|ref|ZP_01069564.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315123714|ref|YP_004065718.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85841696|gb|EAQ58943.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni 260.94]
 gi|315017436|gb|ADT65529.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 402

 Score =  166 bits (420), Expect = 7e-39,   Method: Composition-based stats.
 Identities = 69/416 (16%), Positives = 160/416 (38%), Gaps = 35/416 (8%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           MK  + + LV +G  +       + V  +      + +     +S + L      ++  D
Sbjct: 1   MKKIVAIFLVFLGSLWAE--DPVIDVVNSGVVLPKIIVKDNSNLSDENLKKSFYNIIVND 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  F +++  +     T   ++ +  +  SL        ++   G D+    + L  
Sbjct: 59  LKVSSNFEVVANATETSNYTFEYALNKNGNTLSLNV------KIKAGGSDKSEQTYTL-- 110

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                        +    +  +AH        ++     D+    + ++ +  S   K+ 
Sbjct: 111 -------------NGLEQYPFLAHKSVKASVNTLGLAPVDWMDHKILIARNSSS--KKSQ 155

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D      + +      +   P++   +Q + Y T  D D   +Y  D   ++A K 
Sbjct: 156 IIMADYTLTYQKVIVDG--GLNLFPKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKI 213

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SP 311
           + +   M++A   S +G + L+++   +  D+Y  DL +    +LTN   I+++ ++   
Sbjct: 214 LSSG-GMVVASDVSVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGS 272

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           D S++VF SDR G   +++   N +  +++      +      S   D + ++     + 
Sbjct: 273 DDSKVVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNN---SAVSTYKDFLVYSSREPNQA 329

Query: 371 --FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F I +M  +    R L  +     P +S  G S++F +     +   +  ++ N
Sbjct: 330 GVFNIYLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNAN 385


>gi|94970959|ref|YP_593007.1| WD-40-like beta propeller repeat-containing protein [Candidatus
           Koribacter versatilis Ellin345]
 gi|94553009|gb|ABF42933.1| WD40-like beta Propeller [Candidatus Koribacter versatilis
           Ellin345]
          Length = 298

 Score =  166 bits (420), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 68/246 (27%), Positives = 109/246 (44%), Gaps = 15/246 (6%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  L  +  DG N   LT   D    +P +SP+ + VA+     E + +++LMD    
Sbjct: 56  AGKEQLFRVGLDGKNPLQLTRD-DADHEDPAWSPDGKHVAFVLI-HEKVEQIHLMDPD-G 112

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM------DIYSVDLQSNATERLTNTL 301
                +    S  + P +S + +R +     D A       DI ++D+ ++ T +L +  
Sbjct: 113 GNVTPLTPKESKTIHPSWSPDSRRVIFCTDDDLAPPKKNDSDILAMDIATHETTKLISG- 171

Query: 302 FINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +N    +SPD +++ F     E   ++++   NGSD K ++ D  A    P WSP G  
Sbjct: 172 GVNTFPVWSPDGTKLAFRRMLGERNSEVFLANENGSDPKNLTND-PAFDGWPAWSPDGKQ 230

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGS--K 417
           IAF         I VM  DGS  R          +P WS  G+ L F+  K  D G   +
Sbjct: 231 IAFASNRRGNHEIFVMNADGSGVRKAANSEGRATSPKWSKDGKKLYFTNCKKVDLGIDCE 290

Query: 418 LYSIDL 423
           +Y+ID+
Sbjct: 291 IYAIDV 296



 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 98/239 (41%), Gaps = 15/239 (6%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             +P FSP+ +++ Y +                 + P ++    +    P +S +GK   
Sbjct: 37  NMDPTFSPDGKEMIYISVVAGK--EQLFRVGLDGKNPLQLTRDDADHEDPAWSPDGKHVA 94

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------Q 327
             +  ++   I+ +D        LT      I  S+SPDS +++F +D +          
Sbjct: 95  FVLIHEKVEQIHLMDPDGGNVTPLTPKESKTIHPSWSPDSRRVIFCTDDDLAPPKKNDSD 154

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLL 386
           +  M     +  ++      ++  PVWSP G  +AF +  GE    + +  ++GS  + L
Sbjct: 155 ILAMDIATHETTKLISGGVNTF--PVWSPDGTKLAFRRMLGERNSEVFLANENGSDPKNL 212

Query: 387 VEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWV 443
             D      P WSP G+ + F+  + G    +++ ++ +G       N+   A+ P+W 
Sbjct: 213 TNDPAFDGWPAWSPDGKQIAFASNRRG--NHEIFVMNADGSGVRKAANSEGRATSPKWS 269



 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 9/194 (4%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +  + P FS +GK  +          ++ V L      +LT     +   ++SPD   + 
Sbjct: 35  TQNMDPTFSPDGKEMIYISVVAGKEQLFRVGLDGKNPLQLTRDDADHEDPAWSPDGKHVA 94

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKF 371
           F    E  EQ+++M  +G +   ++  KE+    P WSP    + F              
Sbjct: 95  FVLIHEKVEQIHLMDPDGGNVTPLTP-KESKTIHPSWSPDSRRVIFCTDDDLAPPKKNDS 153

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETL 430
            I  M     +   L+       P WSP G  L F R+  G+  S+++  + NG   + L
Sbjct: 154 DILAMDIATHETTKLISGGVNTFPVWSPDGTKLAF-RRMLGERNSEVFLANENGSDPKNL 212

Query: 431 INTPAYASDPQWVG 444
            N PA+   P W  
Sbjct: 213 TNDPAFDGWPAWSP 226



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 59/144 (40%), Gaps = 1/144 (0%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R++F ++  ++   KN   ++  D A           +   P +SP+  K+A+     E 
Sbjct: 136 RVIFCTDDDLAPPKKNDSDILAMDIATHETTKLISGGVNTFPVWSPDGTKLAFRRMLGER 195

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              V+L +      PK + N  +    P +S +GK+   +  +    +I+ ++   +   
Sbjct: 196 NSEVFLAN-ENGSDPKNLTNDPAFDGWPAWSPDGKQIAFASNRRGNHEIFVMNADGSGVR 254

Query: 296 RLTNTLFINISASYSPDSSQIVFE 319
           +  N+     S  +S D  ++ F 
Sbjct: 255 KAANSEGRATSPKWSKDGKKLYFT 278


>gi|269126248|ref|YP_003299618.1| serine/threonine protein kinase [Thermomonospora curvata DSM 43183]
 gi|268311206|gb|ACY97580.1| serine/threonine protein kinase [Thermomonospora curvata DSM 43183]
          Length = 676

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 106/252 (42%), Gaps = 12/252 (4%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           GA         +     P++SP + ++A+  +       V++++     A ++       
Sbjct: 429 GARAARPLLEGEGCDVLPQWSPRRDRIAFTRWSGGATSEVWVVNPDGGGAERKADGINGR 488

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                +S +G       +      +  +DL   + E+LT+   +    ++S D  ++ F 
Sbjct: 489 SR-VAWSPDGASLAAMTRTGGRAQLSVIDLSDGSVEQLTDDRSVKDDPTWSRDG-KLAFW 546

Query: 320 SDREGKEQLYVMQSNGSDQK--RISQDK--EASYFDPVWSPQGDLIAFTKFS--GEKFAI 373
           S R+G +QLY +      ++  +++  +       DP+WSP G  +AFT  +  G    I
Sbjct: 547 SRRDGSQQLYWLDPADPQRRWRQVTTRRVAPHGANDPIWSPDGRWLAFTVMNEAGHGHDI 606

Query: 374 GVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLI 431
            V++ DG+  R L    ++   P+WSP G+ L F   +      +++++ ++ G+     
Sbjct: 607 AVIRADGTGYRRLTTGPAHDMDPSWSPDGKWLAFV--RGPVATPQIWAMPVDAGQARARP 664

Query: 432 NTPAYASDPQWV 443
             P     P W 
Sbjct: 665 VGPLAVGHPDWS 676



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 92/236 (38%), Gaps = 17/236 (7%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           ++ R   ++ +  SG   + + V++ DG          +       +SP+   +A  T  
Sbjct: 448 WSPRRDRIAFTRWSGGATSEVWVVNPDGGGAERKADGINGRSRV-AWSPDGASLAAMTRT 506

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS- 291
                   +     D + +++ + RS+   P +S +GK      ++D +  +Y +D    
Sbjct: 507 GGRAQLSVI--DLSDGSVEQLTDDRSVKDDPTWSRDGK-LAFWSRRDGSQQLYWLDPADP 563

Query: 292 -NATERLTN-----TLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQ 343
                ++T          +    +SPD   + F   ++      + V++++G+  +R++ 
Sbjct: 564 QRRWRQVTTRRVAPHGAND--PIWSPDGRWLAFTVMNEAGHGHDIAVIRADGTGYRRLTT 621

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWS 398
              A   DP WSP G  +AF +       I  M  D  Q R   V    +  P WS
Sbjct: 622 -GPAHDMDPSWSPDGKWLAFVRGPVATPQIWAMPVDAGQARARPVGPLAVGHPDWS 676



 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 45/209 (21%), Positives = 79/209 (37%), Gaps = 10/209 (4%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLF 302
           T   RA + +       + P++S    R   +     A  +++ V+      ER  + + 
Sbjct: 427 TPGARAARPLLEGEGCDVLPQWSPRRDRIAFTRWSGGATSEVWVVNPDGGGAERKADGIN 486

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                ++SPD + +   +   G+ QL V+  +    ++++ D+     DP WS  G  +A
Sbjct: 487 GRSRVAWSPDGASLAAMTRTGGRAQLSVIDLSDGSVEQLTDDRSVKD-DPTWSRDGK-LA 544

Query: 363 FTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           F         +  +     Q R        V       P WSP GR L F+   +   G 
Sbjct: 545 FWSRRDGSQQLYWLDPADPQRRWRQVTTRRVAPHGANDPIWSPDGRWLAFTVMNEAGHGH 604

Query: 417 KLYSIDLNGRNETLINT-PAYASDPQWVG 444
            +  I  +G     + T PA+  DP W  
Sbjct: 605 DIAVIRADGTGYRRLTTGPAHDMDPSWSP 633



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/183 (11%), Positives = 52/183 (28%), Gaps = 9/183 (4%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES----VVSGIIK 190
           D   +         A    I   +SD   + +T ++   +                   +
Sbjct: 496 DGASLAAMTRTGGRAQLSVI--DLSDGSVEQLTDDRSVKDDPTWSRDGKLAFWSRRDGSQ 553

Query: 191 NSLCVMDRDGAN-IRYLTPSR--DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               +   D     R +T  R       +P +SP+ + +A+   ++        +     
Sbjct: 554 QLYWLDPADPQRRWRQVTTRRVAPHGANDPIWSPDGRWLAFTVMNEAGHGHDIAVIRADG 613

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              +R+    +  + P +S +GK             I+++ + +                
Sbjct: 614 TGYRRLTTGPAHDMDPSWSPDGKWLAFVRGPVATPQIWAMPVDAGQARARPVGPLAVGHP 673

Query: 308 SYS 310
            +S
Sbjct: 674 DWS 676


>gi|121613592|ref|YP_999836.1| translocation protein TolB [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167004807|ref|ZP_02270565.1| translocation protein TolB [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87250020|gb|EAQ72978.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 402

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 68/416 (16%), Positives = 159/416 (38%), Gaps = 35/416 (8%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           MK  + + LV +G  +       + V  +      + +     +S + L      ++  D
Sbjct: 1   MKKIVAIFLVFLGSLWAE--DPVIDVVNSGVVLPKIIVKDNSNLSDENLKKSFYNIIVND 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  F +++  +     T   ++ +  +  SL        ++     D+    + L  
Sbjct: 59  LKVSSNFEVVANATETSNYTFEYALNKNGNTLSLNV------KIKAGSSDKSEQTYTL-- 110

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                        +    +  +AH        ++     D+    + ++ +  S   K+ 
Sbjct: 111 -------------NGLEQYPFLAHKSVKASVNALGLASVDWMDHKILIARNSSS--KKSQ 155

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D      + +      +   P++   +Q + Y T  D D   +Y  D   ++A K 
Sbjct: 156 IIMADYTLTYQKVIVDG--GLNLFPKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKI 213

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SP 311
           + +   M++A   S +G + L+++   +  D+Y  DL +    +LTN   I+++ ++   
Sbjct: 214 LSSG-GMVVASDVSVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGS 272

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           D S++VF SDR G   +++   N +  +++      +      S   D + ++     + 
Sbjct: 273 DDSKVVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNN---SAVSTYKDFLVYSSREPNQA 329

Query: 371 --FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F I +M  +    R L  +     P +S  G S++F +     +   +  ++ N
Sbjct: 330 GVFNIYLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGVQSALGVIRVNAN 385


>gi|62548395|gb|AAX86840.1| TolB [Aggregatibacter actinomycetemcomitans]
          Length = 183

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 49/191 (25%), Positives = 76/191 (39%), Gaps = 11/191 (5%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                AP FS +G R   +  KD  ++IY  +L S    +LT+    N   S+SPD   I
Sbjct: 1   PGHNGAPAFSPDGSRLAFASSKDGVLNIYVTNLGSGQVSQLTSGAGNNTEPSWSPDGQSI 60

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SDR G  Q+Y M ++G     I             S  G+L+     +     I   
Sbjct: 61  VFTSDRGGSPQVYRMSASGGGASLI-----GGRGSGQISSDGNLLVMVDVNN---NIVKK 112

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPA 435
                   +L      ++P+ SP+G  +I+S  +    G  L  +  +GR +  L     
Sbjct: 113 DLTSGSSEVLSSTFLDESPSISPNGIMVIYSSTQG--LGKVLQLVSTDGRFKARLPGNDG 170

Query: 436 YASDPQWVGFM 446
               P W  ++
Sbjct: 171 QVKFPAWSPYL 181



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 71/184 (38%), Gaps = 12/184 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P FSP+  ++A+A+  D  +L +Y+ +    +  + + +       P +S +G+  + + 
Sbjct: 7   PAFSPDGSRLAFASSKDG-VLNIYVTNLGSGQVSQ-LTSGAGNNTEPSWSPDGQSIVFTS 64

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +  +  +Y +         +        S   S D + +V     +    +        
Sbjct: 65  DRGGSPQVYRMSASGGGASLI----GGRGSGQISSDGNLLVMV---DVNNNIVKKDLTSG 117

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAP 395
             + +S         P  SP G ++ ++   G    + ++  DG  + RL   D  ++ P
Sbjct: 118 SSEVLSSTF--LDESPSISPNGIMVIYSSTQGLGKVLQLVSTDGRFKARLPGNDGQVKFP 175

Query: 396 TWSP 399
            WSP
Sbjct: 176 AWSP 179



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 11/157 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G+       S      EP +SP+ Q + + + D     +VY M      A    G     
Sbjct: 34  GSGQVSQLTSGAGNNTEPSWSPDGQSIVFTS-DRGGSPQVYRMSASGGGASLIGGRGSGQ 92

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           I     SS+G   ++    D   +I   DL S ++E L++T F++ S S SP+   +++ 
Sbjct: 93  I-----SSDGNLLVMV---DVNNNIVKKDLTSGSSEVLSST-FLDESPSISPNGIMVIYS 143

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           S +   + L ++ ++G  + R+    +     P WSP
Sbjct: 144 STQGLGKVLQLVSTDGRFKARL-PGNDGQVKFPAWSP 179


>gi|320101787|ref|YP_004177378.1| WD40-like beta Propeller containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319749069|gb|ADV60829.1| WD40-like beta Propeller containing protein [Isosphaera pallida
           ATCC 43644]
          Length = 365

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 59/277 (21%), Positives = 102/277 (36%), Gaps = 35/277 (12%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSM 259
            NIR +T    +      FSP+  ++ +          ++Y+ + + D  PK +   R  
Sbjct: 44  TNIRQVTYGFAKAGEG-YFSPDGSRIIFQAAPQGKEDYQIYVAELKPDAQPKMVSTGRGK 102

Query: 260 ILAPRFSSNGKRALISVQK----------------------------DEAMDIYSVDLQS 291
                F  +G+  + +                               DE M+I+  DL+ 
Sbjct: 103 CTCAFFHPDGQSIIFASSHLDPKLDQPAEPRAKSPAYSRDARYRWDFDEWMEIFRADLEG 162

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               RLT+    +   SYSPD   IVF S R+G  ++Y+M ++G + +RI+         
Sbjct: 163 GNLVRLTDAPGYDAEGSYSPDGKSIVFTSFRDGDAEIYIMDADGRNPRRITH-APGYDGG 221

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMK--KDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
           P +SP G  I +         + +     +G  ER L   D+    P + P G   ++S 
Sbjct: 222 PFFSPDGKRIIYRSDRKGNDLLQIFDNSVEGDDERQLTSNDAVNWGPYYHPDGEFFVYST 281

Query: 409 KKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
              G    ++Y   L  G    L     +   P +  
Sbjct: 282 SIHGHQNYEVYMQSLKTGAMTRLTYVEGFDGLPVFSP 318



 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 105/249 (42%), Gaps = 12/249 (4%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR----FSPNQQKVAYATYDDEDILRV 239
           V +G  K +      DG +I + +   D  L +P      SP   + A   +D ++ + +
Sbjct: 96  VSTGRGKCTCAFFHPDGQSIIFASSHLDPKLDQPAEPRAKSPAYSRDARYRWDFDEWMEI 155

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +  D        R+ +         +S +GK  + +  +D   +IY +D       R+T+
Sbjct: 156 FRADLEGGNLV-RLTDAPGYDAEGSYSPDGKSIVFTSFRDGDAEIYIMDADGRNPRRITH 214

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQ 357
               +    +SPD  +I++ SDR+G + L +      G D+++++ +   ++  P + P 
Sbjct: 215 APGYDGGPFFSPDGKRIIYRSDRKGNDLLQIFDNSVEGDDERQLTSNDAVNW-GPYYHPD 273

Query: 358 GDLIAFTKFSGE--KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK-KDGD 413
           G+   ++        + + +          L   +     P +SP GR L+++ K +  D
Sbjct: 274 GEFFVYSTSIHGHQNYEVYMQSLKTGAMTRLTYVEGFDGLPVFSPDGRKLMWTSKGRTAD 333

Query: 414 TGSKLYSID 422
             S+L+  D
Sbjct: 334 NTSQLFIAD 342



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 44/116 (37%), Gaps = 6/116 (5%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI++ S+    G     +     +G + R LT S D + + P + P+ +   Y+T     
Sbjct: 230 RIIYRSDR--KGNDLLQIFDNSVEGDDERQLT-SNDAVNWGPYYHPDGEFFVYSTSIHGH 286

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV---QKDEAMDIYSVD 288
                 M +    A  R+         P FS +G++ + +      D    ++  D
Sbjct: 287 QNYEVYMQSLKTGAMTRLTYVEGFDGLPVFSPDGRKLMWTSKGRTADNTSQLFIAD 342


>gi|218516344|ref|ZP_03513184.1| translocation protein TolB [Rhizobium etli 8C-3]
          Length = 133

 Score =  164 bits (415), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 62/133 (46%), Positives = 92/133 (69%), Gaps = 1/133 (0%)

Query: 36  VKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPD 95
           V +     N  P+ IA T F+   ++G +VS+V++ DLQRS +F  I++ +F +KI+NPD
Sbjct: 2   VTLDLRKGNVQPMPIAVTDFL-QGDMGAQVSQVIAADLQRSGLFAPINKSAFIEKISNPD 60

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
           + PRF+DW  + AQ LVTGRV +E   RLR EFRLWD    +Q+ G++F++ P +WR++A
Sbjct: 61  ASPRFEDWKVINAQALVTGRVTQEADGRLRAEFRLWDPFAGQQMTGQQFYTQPENWRRVA 120

Query: 156 HTISDDIYQSITG 168
           H I+D IY+ ITG
Sbjct: 121 HIIADAIYKQITG 133


>gi|86149640|ref|ZP_01067870.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85839908|gb|EAQ57167.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni CF93-6]
          Length = 402

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 68/416 (16%), Positives = 160/416 (38%), Gaps = 35/416 (8%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           MK  + + LV +G  +       + V  +      + +     +S + L      ++  D
Sbjct: 1   MKKIVAIFLVFLGSLWAE--DPVIDVVNSGVVLPKIIVKDNSNLSDENLKKSFYNIIVND 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  F +++  +     T   ++ +  +  SL        ++   G D+    + L  
Sbjct: 59  LKVSSNFEVVANATETSNYTFEYALNKNGNTLSLNV------KIKAGGSDKSEQTYTL-- 110

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                        +    +  +AH        ++     D+    + ++ +  S   K+ 
Sbjct: 111 -------------NGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSS--KKSQ 155

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D      + +      +   P++   +Q + Y T  D D   +Y  D   ++A K 
Sbjct: 156 IIMADYTLTYQKVIVDG--GLNLFPKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKI 213

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SP 311
           + +   M++A   + +G + L+++   +  D+Y  DL +    +LTN   I+++ ++   
Sbjct: 214 LSSG-GMVVASDVNVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGS 272

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           D S++VF SDR G   +++   N +  +++      +      S   D + ++     + 
Sbjct: 273 DDSKVVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNN---SAVSTYKDFLVYSSREPNQA 329

Query: 371 --FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F I +M  +    R L  +     P +S  G S++F +     +   +  ++ N
Sbjct: 330 GVFNIYLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNAN 385


>gi|18395019|ref|NP_564147.1| unknown protein [Arabidopsis thaliana]
 gi|5263319|gb|AAD41421.1|AC007727_10 ESTs gb|N96028, gb|F14286, gb|T20680, gb|F14443, gb|AA657300 and
           gb|N65244 come from this gene [Arabidopsis thaliana]
 gi|15028243|gb|AAK76710.1| unknown protein [Arabidopsis thaliana]
 gi|23297034|gb|AAN13226.1| unknown protein [Arabidopsis thaliana]
 gi|332192017|gb|AEE30138.1| DPP6 N-terminal domain-like protein [Arabidopsis thaliana]
          Length = 706

 Score =  164 bits (414), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 78/396 (19%), Positives = 136/396 (34%), Gaps = 57/396 (14%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
            ++ +S   +   P  +  F    S      V     + G D   VE  L+D+  R + I
Sbjct: 297 PLTTESVTIQRVTPPGVHAFTPATSPNNHEFVAVATRRPGSDYRHVE--LFDL-KRNEFI 353

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
                 +P S         D         +GD N R   +            L +   DG
Sbjct: 354 ELTRLVAPKSHHLNPFLSPDSSRVGYHSCRGDANGRRSPLLFLENIQTTTRDLSLFRIDG 413

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +               P FSP   ++AY       +  V+++        +    ++ M 
Sbjct: 414 S--------------FPSFSPGGDRIAYV-----KMPGVFVVKPDGSGQREV---YKGMA 451

Query: 261 LAPRFSSNGKRALISVQKDEAM------DIYSVDLQ----SNATERLTNTLFINISASYS 310
            +  +       + S             D+ S+D+     S++  RLT     N     S
Sbjct: 452 FSTAWDPVRPGIVYSSSGPTFATERTEVDVISIDVDAADKSSSVRRLTTNGKNNAFPWPS 511

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS- 367
           PD  +IVF S R G + LY+M +   +   + +  E ++ D    WSP G+ IAF     
Sbjct: 512 PDGKRIVFRSGRTGHKNLYIMDAEKGESGGLWRLTEGAWTDTMCNWSPDGEWIAFASDRE 571

Query: 368 ---GEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDG--------- 412
                 F + ++  +G+  R L+          P +SP  +SL+F+    G         
Sbjct: 572 SPGSGSFELFLIHPNGTGLRKLIQSGTGGRTNHPIFSPDSKSLVFTSDYAGISAEPISNP 631

Query: 413 ---DTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
                   ++++ L+G N   +   +Y    P W  
Sbjct: 632 HHYQPYGDIFTVKLDGSNVRRLTHNSYEDGTPAWAP 667



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 81/258 (31%), Gaps = 36/258 (13%)

Query: 220 SPNQQKVAYATYDDEDILR------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           S + + + Y +  +           VY  + +     +R+        +P  S +G    
Sbjct: 166 SLSGEFIVYVSTHESSGEPRASWTAVYSTELKTG-LTRRLTPSGVADFSPAVSPSGNLTA 224

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-------ASYSPDSSQIVF--ESDREG 324
           ++   +        +L+++    LT      +          +  D S + F   S+ +G
Sbjct: 225 VASYGERGWTGEVEELRTDIYVFLTRDGSHRVKVVEHGGWPCWV-DESTLYFHRRSEEDG 283

Query: 325 KEQLY--VMQSNGS------DQKRISQDKEASYFDPVWSPQG-DLIAFTKFSGEK--FAI 373
              +Y  ++  NG         +R++     + F P  SP   + +A            +
Sbjct: 284 WISVYRAILPENGPLTTESVTIQRVTPPGVHA-FTPATSPNNHEFVAVATRRPGSDYRHV 342

Query: 374 GVMKKDGSQ----ERLLVEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKLYSIDLNGR 426
            +     ++     RL+   S+   P  SP    + +   +    G     L+  ++   
Sbjct: 343 ELFDLKRNEFIELTRLVAPKSHHLNPFLSPDSSRVGYHSCRGDANGRRSPLLFLENIQTT 402

Query: 427 NETLINTPAYASDPQWVG 444
              L       S P +  
Sbjct: 403 TRDLSLFRIDGSFPSFSP 420



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 63/186 (33%), Gaps = 28/186 (15%)

Query: 263 PRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           P  S  G+  +     + + +       +YS +L++  T RLT +   + S + SP  + 
Sbjct: 165 PSLS--GEFIVYVSTHESSGEPRASWTAVYSTELKTGLTRRLTPSGVADFSPAVSPSGNL 222

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASY------FDPVWSPQGDLIAFTKFSGE 369
               S  E      V +        +++D             P W      + F + S E
Sbjct: 223 TAVASYGERGWTGEVEELRTDIYVFLTRDGSHRVKVVEHGGWPCWV-DESTLYFHRRSEE 281

Query: 370 KFAIGVMKK----DG-------SQERLLVEDSNLQAPTWSPSG-RSLIFSRKKDGDTGSK 417
              I V +     +G       + +R+     +   P  SP+    +  + ++ G     
Sbjct: 282 DGWISVYRAILPENGPLTTESVTIQRVTPPGVHAFTPATSPNNHEFVAVATRRPGSDYRH 341

Query: 418 LYSIDL 423
           +   DL
Sbjct: 342 VELFDL 347


>gi|305664788|ref|YP_003861075.1| hypothetical protein FB2170_00745 [Maribacter sp. HTCC2170]
 gi|88707910|gb|EAR00149.1| hypothetical protein FB2170_00745 [Maribacter sp. HTCC2170]
          Length = 502

 Score =  163 bits (412), Expect = 6e-38,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 101/234 (43%), Gaps = 18/234 (7%)

Query: 193 LCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L  +  +G     + T   ++I  +   SP+  ++  +   +     +Y +       PK
Sbjct: 269 LYKIYVEGGVPEMIPTDFANKINNDHGISPDGTQMVISDQTETGQSMIYSIPIE-GGVPK 327

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +I    S      +S +GK      ++++  DIY++ ++     RLT+T  ++    YSP
Sbjct: 328 KITPLASSYWH-GWSPDGKTLAYCAERNDNYDIYTIPIKGGEETRLTSTEGLDDGPDYSP 386

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---- 367
           D   I F S R G  Q++ M+++GS+Q++I+ DK   +F    SP G  +A+  F+    
Sbjct: 387 DGKYIYFNSTRTGTMQIWRMKTDGSEQEQITTDKYNDWFA-HPSPDGKWLAYVTFNTDVP 445

Query: 368 ------GEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKD 411
                  +   + +M  +  +  +L +       +  P+WSP    + F     
Sbjct: 446 AGDHPPNKDVMLRLMNIETREVTVLAKIFGGQGTINVPSWSPDSGRIAFVSYTQ 499



 Score =  130 bits (326), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 89/210 (42%), Gaps = 21/210 (10%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--INIS 306
             K +   +  I AP ++ +GK  + + Q      +Y + ++    E +       IN  
Sbjct: 238 NRKVVHQPKEHIEAPNWTPDGKTLIYNSQG----LLYKIYVEGGVPEMIPTDFANKINND 293

Query: 307 ASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              SPD +Q+V  SD+   G+  +Y +   G   K+I+    AS +   WSP G  +A+ 
Sbjct: 294 HGISPDGTQMV-ISDQTETGQSMIYSIPIEGGVPKKITPL--ASSYWHGWSPDGKTLAYC 350

Query: 365 KFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               + + I  +   G +E  L         P +SP G+ + F+  + G    +++ +  
Sbjct: 351 AERNDNYDIYTIPIKGGEETRLTSTEGLDDGPDYSPDGKYIYFNSTRTGTM--QIWRMKT 408

Query: 424 NGRNETLINTPAY-------ASDPQWVGFM 446
           +G  +  I T  Y       + D +W+ ++
Sbjct: 409 DGSEQEQITTDKYNDWFAHPSPDGKWLAYV 438


>gi|315929958|gb|EFV09112.1| tol-Pal system beta propeller repeat protein TolB [Campylobacter
           jejuni subsp. jejuni 305]
          Length = 404

 Score =  163 bits (412), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 67/417 (16%), Positives = 159/417 (38%), Gaps = 35/417 (8%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
            MK  + + LV +G  +       + V  +      + +     +S + L      ++  
Sbjct: 2   KMKKIVAIFLVFLGSLWAE--DPVIDVVNSGVVLPKIIVKDNSNLSDENLKKSFYNIIVN 59

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  F +++  +         ++ +  +  SL        ++   G D+    + L 
Sbjct: 60  DLKVSSNFEVVANATETSNYIFEYTLNKNGNTLSLNV------KIKAGGSDKSEQTYTL- 112

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
                         +    +  +AH        ++     D+    + ++ +  S   K+
Sbjct: 113 --------------NGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSS--KKS 156

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + + D      + +      +   P++   +Q + Y T  D D   +Y  D   ++A K
Sbjct: 157 QIIMADYTLTYQKVIVDG--GLNLFPKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASK 214

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-S 310
            + +   M++A   + +G + L+++   +  D+Y  DL +    +LTN   I+++ ++  
Sbjct: 215 ILSSG-GMVVASDVNVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIG 273

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D S++VF SDR G   +++   N +  +++      +      S   D + ++     +
Sbjct: 274 SDDSKVVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNN---SAVSTYKDFLVYSSREPNQ 330

Query: 371 ---FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              F I +M  +    R L  +     P +S  G S++F +     +   +  ++ N
Sbjct: 331 AGVFNIYLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNAN 387


>gi|88597176|ref|ZP_01100411.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218561793|ref|YP_002343572.1| translocation protein TolB [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|32699721|sp|Q9PJ14|TOLB_CAMJE RecName: Full=Protein tolB; Flags: Precursor
 gi|88190237|gb|EAQ94211.1| tolB protein, putative [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112359499|emb|CAL34283.1| putative TolB precursor protein [Campylobacter jejuni subsp. jejuni
           NCTC 11168]
 gi|315926950|gb|EFV06312.1| tol-Pal system beta propeller repeat protein TolB [Campylobacter
           jejuni subsp. jejuni DFVF1099]
          Length = 402

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 159/416 (38%), Gaps = 35/416 (8%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           MK  + + LV +G  +       + V  +      + +     +S + L      ++  D
Sbjct: 1   MKKIVAIFLVFLGSLWAE--DPVIDVVNSGVVLPKIIVKDNSNLSDENLKKSFYNIIVND 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  F +++  +         ++ +  +  SL        ++   G D+    + L  
Sbjct: 59  LKVSSNFEVVANATETSNYIFEYTLNKNGNTLSLNV------KIKAGGSDKSEQTYTL-- 110

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                        +    +  +AH        ++     D+    + ++ +  S   K+ 
Sbjct: 111 -------------NGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSS--KKSQ 155

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D      + +      +   P++   +Q + Y T  D D   +Y  D   ++A K 
Sbjct: 156 IIMADYTLTYQKVIVDG--GLNLFPKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKI 213

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SP 311
           + +   M++A   + +G + L+++   +  D+Y  DL +    +LTN   I+++ ++   
Sbjct: 214 LSSG-GMVVASDVNVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGS 272

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           D S++VF SDR G   +++   N +  +++      +      S   D + ++     + 
Sbjct: 273 DDSKVVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNN---SAVSTYKDFLVYSSREPNQA 329

Query: 371 --FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F I +M  +    R L  +     P +S  G S++F +     +   +  ++ N
Sbjct: 330 GVFNIYLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNAN 385


>gi|305432653|ref|ZP_07401814.1| translocation protein TolB [Campylobacter coli JV20]
 gi|304444364|gb|EFM37016.1| translocation protein TolB [Campylobacter coli JV20]
          Length = 403

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 73/419 (17%), Positives = 159/419 (37%), Gaps = 40/419 (9%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE--LGGKVSEVVS 70
           MK  + + L+ +G  +       V    NS    P  I      ++ +  L      ++ 
Sbjct: 1   MKKIVTVFLIFLGILW---AEDPVIDVVNSGVVLP-KIIVKDNSNLSDINLKRSFYNIIV 56

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  F ++S  S      +  +   F+   S     L            L V+ + 
Sbjct: 57  NDLKVSSNFEVVSDAS------SEAANYTFEYDLSKNGNAL-----------NLHVKIK- 98

Query: 131 WDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
                  +   + +  +S   +  +AH        ++     ++    + ++ +  S   
Sbjct: 99  ---AGGLEKSSQTYALNSVEQYPFLAHKSVKASVNALGLAPVEWMDHKILIARNSSS--K 153

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K+ + + D      + +      +   P++   +Q + Y T  D D   +Y  D R ++A
Sbjct: 154 KSQIIMADYTLTYQKVIIDG--GLNLFPKWGNKEQSIFYYTAYDHDRPTLYRYDLRTNKA 211

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K + +   M++A   S +G + L+++   +  D+Y  DL S    +LTN   I+++ ++
Sbjct: 212 SKILASG-GMVVASDVSLDGSKLLVTMAPKDQPDVYLYDLNSKNLTQLTNYSGIDVNGNF 270

Query: 310 -SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
              D S+ VF SDR G   +++   N    ++     + +      S   D + ++    
Sbjct: 271 IGVDDSKFVFVSDRLGYPNIFIQNLNNGSAEQAVFHGKNN---SAVSTYKDFLVYSSREP 327

Query: 369 EK---FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +   F I +M  + +  R    +     P +S  G S++F +     +   +  ++ N
Sbjct: 328 NQVGVFNIYLMSINSTGIRQFTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNAN 386


>gi|182416392|ref|YP_001821458.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Opitutus terrae PB90-1]
 gi|177843606|gb|ACB77858.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Opitutus terrae PB90-1]
          Length = 410

 Score =  162 bits (409), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 66/305 (21%), Positives = 127/305 (41%), Gaps = 17/305 (5%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI--TGEKGDFNSRILFVSESVVSGIIKN 191
                 +  + FS   + + + H  +D   +     G KG F +++ F+ E       K 
Sbjct: 105 GSGGTPVASQVFSGANARQALLH-AADFAVEQTNGMGLKGFFTAQLAFIGERTG----KK 159

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   D      + +T   + +   PR++P+  ++ Y ++       ++ +D    +   
Sbjct: 160 EVYTADLFFGGAKQITRD-NALALMPRWAPDGNRLLYTSFFKSGFPDIFQIDLSTYQRTT 218

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            + +F+      RFS NG++  + +  +   +IY  + Q     R T +  +  S  +SP
Sbjct: 219 FV-SFKGTNSGARFSPNGQQVAMVLSGEGTPEIYLSNAQGRQVSRKTRSDAVKSSPCFSP 277

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFSGEK 370
           D S+IVF    E   QLYVM   G    RI+        +P WS    + IAFT  +G  
Sbjct: 278 DGSRIVFA--MEPGPQLYVMSVAGGVPSRITSGISRYCAEPDWSRANPNKIAFTMRAGG- 334

Query: 371 FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNE 428
           + IGV+     +   + +   +   P+W   GR L+++ +      S +  +D   G++ 
Sbjct: 335 YQIGVLDLSTRKGAQVSKAPFDGIEPSWLADGRHLVYTARD--RRSSVICILDTETGKSV 392

Query: 429 TLINT 433
            +  T
Sbjct: 393 RVSPT 397



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 66/174 (37%), Gaps = 7/174 (4%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V+SG     + + +  G  +   T S D +   P FSP+  ++ +A    E   ++Y+M 
Sbjct: 241 VLSGEGTPEIYLSNAQGRQVSRKTRS-DAVKSSPCFSPDGSRIVFA---MEPGPQLYVMS 296

Query: 244 TRIDRAPKRIGNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                  +           P +S +N  +   +++      I  +DL +    +++   F
Sbjct: 297 VAGGVPSRITSGISRYCAEPDWSRANPNKIAFTMRAGG-YQIGVLDLSTRKGAQVSKAPF 355

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWS 355
             I  S+  D   +V+ +       + ++ +      R+S     +     VW+
Sbjct: 356 DGIEPSWLADGRHLVYTARDRRSSVICILDTETGKSVRVSPTSFGNVMQASVWT 409


>gi|162448922|ref|YP_001611289.1| tolB protein [Sorangium cellulosum 'So ce 56']
 gi|161159504|emb|CAN90809.1| tolB protein [Sorangium cellulosum 'So ce 56']
          Length = 444

 Score =  162 bits (409), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 80/400 (20%), Positives = 153/400 (38%), Gaps = 26/400 (6%)

Query: 38  VATNSANYSPVS-IAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
           +   +    P+  I     +  D     +  VV +DL+    F ++   +    +   DS
Sbjct: 44  ITVVAGATRPLPKIGVLPSLVSDPEDVTIHSVVRRDLELCGEFEVLPDSAAPDGLYLSDS 103

Query: 97  IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSPASWRKIA 155
               + W++ G + +V+    K   D++ +  + + V   +  +  KKF       R  +
Sbjct: 104 PVDVKAWSAKGVEAVVSVSGKKVAADKVELVGQAFLVNRGQAPVFDKKFIVPLRDVRFES 163

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H ++D +  ++TG+ G F S + F S S         +  +D DG + R ++P  DQ   
Sbjct: 164 HRVADQLIGALTGQNGGFASHMTFASGSGS----LRRVFTIDADGHDARAVSP-PDQTAI 218

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P F  N+Q + YA     D  +V+         P      +  +    FS +  +  +S
Sbjct: 219 APAFGKNEQ-LHYAASVKGDEYKVFTPAGGPLPLP-----VKGSVYGIAFSKDRAQVALS 272

Query: 276 VQKDEAMDIYS-VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +     + ++S  DLQS       + + + +   ++P   ++ F  +    +++YV    
Sbjct: 273 IGVGSTIKLFSGPDLQSIKP---ASEVGMALHPVFTPTG-KLAFSGEGRYGQRIYVGD-- 326

Query: 335 GSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNL 392
               K IS D   AS       P G    +    G+   +    + G     L       
Sbjct: 327 ----KAISPDGLFASAPTFCNHPDGVKAVYAVGVGKNTDLVASGETGGGLVRLTQNQGRN 382

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             P  SP GR + F   +    G  LY + ++G+    I+
Sbjct: 383 GYPACSPDGRLVAFFSTRTSGEGPGLYVMRVDGQRPKRIS 422



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 14/162 (8%)

Query: 200 GANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           G +++ + P+ +  +   P F+P   K+A+ + +     R+Y+ D       K I     
Sbjct: 284 GPDLQSIKPASEVGMALHPVFTPTG-KLAF-SGEGRYGQRIYVGD-------KAISPDGL 334

Query: 259 MILAPRF--SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              AP F    +G +A+ +V   +  D+ +         RLT     N   + SPD   +
Sbjct: 335 FASAPTFCNHPDGVKAVYAVGVGKNTDLVASGETGGGLVRLTQNQGRNGYPACSPDGRLV 394

Query: 317 VFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            F S R       LYVM+ +G   KRIS     S       P
Sbjct: 395 AFFSTRTSGEGPGLYVMRVDGQRPKRISNLLGDSLRWDPLPP 436


>gi|159901044|ref|YP_001547291.1| serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159894083|gb|ABX07163.1| serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 642

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 59/270 (21%), Positives = 106/270 (39%), Gaps = 12/270 (4%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  S        +L  +D     +  + P  D      R   +  +VAY+     D L  
Sbjct: 378 IISSREGNSGAYNLLSLDIPTGAVSEVVPHHDDNAIASRRRSDG-RVAYSHGV--DGLEQ 434

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA----MDIYSVDLQSNATE 295
               +      +++ +      APR+S +G +      +D +     DIY +D   +  +
Sbjct: 435 IFTISANGSDEQQLTSAPGESRAPRWSPDGSKIAFESDRDHSNNNSFDIYIMDADGSNVQ 494

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           R+T         ++SPD +++ F S   G  ++ V+    ++++ +    + S F   WS
Sbjct: 495 RVTAEGGWQGGPAWSPDGTKLAFHSQTSGLYEIVVLDL-TTNKQYLLASVDDSAFWADWS 553

Query: 356 PQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDG 412
           P G  IAF T  +  +  I  +   G + R L        + P WSP GR L F   ++ 
Sbjct: 554 PDGQTIAFMTGDNDSRTKIYTVPTSGGEPRELTNLGTGKNRWPRWSPDGRYLAFESYRND 613

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             G  L  +   G+ E L +   +   P W
Sbjct: 614 HWGIYLQHL-ATGKVEALSDGTRHDRWPSW 642



 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 54/233 (23%), Positives = 104/233 (44%), Gaps = 12/233 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S     +  +   +     +  +D       + + +     +A R  S+G R   S   D
Sbjct: 372 SAEGDLIISSREGNSGAYNLLSLDIPTGAVSEVVPHHDDNAIASRRRSDG-RVAYSHGVD 430

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----LYVMQSNG 335
               I+++    +  ++LT+    + +  +SPD S+I FESDR+        +Y+M ++G
Sbjct: 431 GLEQIFTISANGSDEQQLTSAPGESRAPRWSPDGSKIAFESDRDHSNNNSFDIYIMDADG 490

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQ 393
           S+ +R++ +       P WSP G  +AF   +   + I V+    +++ LL  V+DS   
Sbjct: 491 SNVQRVTAEG-GWQGGPAWSPDGTKLAFHSQTSGLYEIVVLDLTTNKQYLLASVDDSAFW 549

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA--SDPQWVG 444
           A  WSP G+++ F    D D+ +K+Y++  +G     +          P+W  
Sbjct: 550 A-DWSPDGQTIAFMTG-DNDSRTKIYTVPTSGGEPRELTNLGTGKNRWPRWSP 600



 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 70/182 (38%), Gaps = 6/182 (3%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S+I F S+   S      + +MD DG+N++ +T         P +SP+  K+A+ +    
Sbjct: 465 SKIAFESDRDHSNNNSFDIYIMDADGSNVQRVTAEG-GWQGGPAWSPDGTKLAFHSQTSG 523

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNA 293
            +  + ++D   ++    + +         +S +G+     +   D    IY+V      
Sbjct: 524 -LYEIVVLDLTTNKQY-LLASVDDSAFWADWSPDGQTIAFMTGDNDSRTKIYTVPTSGGE 581

Query: 294 TERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              LTN     N    +SPD   + FES R     +Y+        + +S         P
Sbjct: 582 PRELTNLGTGKNRWPRWSPDGRYLAFESYRNDHWGIYLQHLATGKVEALSDGTRH-DRWP 640

Query: 353 VW 354
            W
Sbjct: 641 SW 642



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 35/94 (37%), Gaps = 2/94 (2%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           D++     ++        +  +  +   G   R LT         PR+SP+ + +A+ +Y
Sbjct: 551 DWSPDGQTIAFMTGDNDSRTKIYTVPTSGGEPRELTNLGTGKNRWPRWSPDGRYLAFESY 610

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            + D   +YL      +  + + +       P +
Sbjct: 611 RN-DHWGIYLQHLATGK-VEALSDGTRHDRWPSW 642


>gi|319957282|ref|YP_004168545.1| translocation protein tolb [Nitratifractor salsuginis DSM 16511]
 gi|319419686|gb|ADV46796.1| translocation protein TolB [Nitratifractor salsuginis DSM 16511]
          Length = 414

 Score =  161 bits (408), Expect = 2e-37,   Method: Composition-based stats.
 Identities = 65/394 (16%), Positives = 154/394 (39%), Gaps = 22/394 (5%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQK 90
           ++ A +K+  N    + +++          LG K  E+ + DL+ +  +           
Sbjct: 15  AVDATLKIEKNVDQRAKIAV-IDSSDPGMPLGRKSYEIFTADLKITGHYRP-DGLYHDGS 72

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF-SSPA 149
              P   P  +       + L+  R+ + G   + ++ ++    D   +  +K+   S A
Sbjct: 73  FNGPILNPDLRA-----MEYLLKYRISESGNG-VSLDVKVLKGGDSSLVFERKYSIGSQA 126

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            +  + H    D+  ++     D+ +R  +V  +  +G  ++ + + D     I+ +   
Sbjct: 127 RYPFLIHRAVTDLNAAMGFTPVDWLNR--YVLFARYTGRRESEVVLADYTFTYIKPIIRG 184

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              +   P +   +Q+  Y T     +  +Y +D    +   RI + + M++    S +G
Sbjct: 185 --GLNIFPVWGDAKQRTIYYTDYSGKLPTLYRLDLTTGQ-RTRILDSQGMLVCSDVSRDG 241

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           KR L+++      DIY  ++ +    +LT    I++   Y+     +VF S+R G   ++
Sbjct: 242 KRLLLTMAPSGQPDIYEYNVATGEKRQLTTYSGIDVGGKYADKERSMVFVSNRLGYANIF 301

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEKFAIGVMKKDGSQERL 385
                G    ++      +     +    + + ++       G+ F + +   DG   R 
Sbjct: 302 KKPLAGGPITQLVFHGSNNDSCDAF---DNKVVYSSKEKSSFGKAFNLYLTTTDGDYTRP 358

Query: 386 LVEDSNLQAPTWSPSGRSLIF-SRKKDGDTGSKL 418
           L      Q P +S  G ++++  R + G++   +
Sbjct: 359 LTSGGINQFPRFSNDGNTVLYIKRSEAGNSIGYI 392


>gi|284925405|gb|ADC27757.1| translocation protein TolB [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 402

 Score =  161 bits (407), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 68/416 (16%), Positives = 158/416 (37%), Gaps = 35/416 (8%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           MK  + + LV +G  +       + V  +      + +     +S + L      ++  D
Sbjct: 1   MKKIVAIFLVFLGSLWAE--DPVIDVVNSGVVLPKIIVKDNSNLSDENLKKSFYNIIVND 58

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  F ++        +T   +       N  G  + +  ++   G D+    + L  
Sbjct: 59  LKVSSNFEVV------ANVTETSNYIFEYTLNKNGNTLSLNVKIKAGGSDKSEQTYTL-- 110

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                        +    +  +AH        ++     D+    + ++ +  S   K+ 
Sbjct: 111 -------------NGLEQYPFLAHKSVKASVNALGLAPVDWMDHKILIARNSSS--KKSQ 155

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D      + +      +   P++   +Q + Y T  D D   +Y  D   ++A K 
Sbjct: 156 IIMADYTLTYQKVIVDG--GLNLFPKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKI 213

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SP 311
           + +   M++A   + +G + L+++   +  D+Y  DL +    +LTN   I+++ ++   
Sbjct: 214 LSSG-GMVVASDVNVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGS 272

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           D S++VF SDR G   +++   N +  +++      +      S   D + ++     + 
Sbjct: 273 DDSKVVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNN---SAVSTYKDFLVYSSREPNQA 329

Query: 371 --FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F I +M  +    R L  +     P +S  G S++F +     +   +  ++ N
Sbjct: 330 GVFNIYLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNAN 385


>gi|329848102|ref|ZP_08263130.1| WD40-like Beta Propeller Repeat family protein [Asticcacaulis
           biprosthecum C19]
 gi|328843165|gb|EGF92734.1| WD40-like Beta Propeller Repeat family protein [Asticcacaulis
           biprosthecum C19]
          Length = 501

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 93/225 (41%), Gaps = 15/225 (6%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  ++  T + +++  +  FSP+ +++  +   + D      +       P+ +      
Sbjct: 275 GTPVKLETGALNKMNNDHGFSPDGKEIVVSDQTEPDNQSRIHILPAAGGTPRLVTPNGPS 334

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                +S +GK      Q+    D+YS+ +      RLT T  ++  A YS D   I F 
Sbjct: 335 YWH-GWSPDGKTLAYIAQRGGDYDVYSIPVGGGPETRLTTTPGLDDGAEYSADGQWIYFN 393

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------KFSGE 369
           S R G  +L+ M+S+GS  ++++   ++  + P  SP G  IAF             + +
Sbjct: 394 SVRSGNMKLWRMKSDGSGAEQLTFGDDSRDWFPHPSPDGKWIAFIAFGTDVAVGDHPANK 453

Query: 370 KFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKK 410
              + +M   G +  +L         +  P+WSP  + + F   +
Sbjct: 454 DVELRLMPAAGGEAVVLAWLFGGQGTINVPSWSPDSKKIAFVSYR 498



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 83/215 (38%), Gaps = 19/215 (8%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-- 303
            ++    + +    I AP +S +G   L +          S  +      +L        
Sbjct: 229 SNKNRTIVWHTTGHIEAPNWSPDGSYLLYNSAGHLFTIPVSGPVNGGTPVKLETGALNKM 288

Query: 304 NISASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           N    +SPD  +IV  SD+   + + +++++ + G   + ++ +  + +    WSP G  
Sbjct: 289 NNDHGFSPDGKEIV-VSDQTEPDNQSRIHILPAAGGTPRLVTPNGPSYWHG--WSPDGKT 345

Query: 361 IAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +A+    G  + +  +   G  E RL           +S  G+ + F+  + G+   KL+
Sbjct: 346 LAYIAQRGGDYDVYSIPVGGGPETRLTTTPGLDDGAEYSADGQWIYFNSVRSGNM--KLW 403

Query: 420 SIDLNGRNETLIN--------TPAYASDPQWVGFM 446
            +  +G     +          P  + D +W+ F+
Sbjct: 404 RMKSDGSGAEQLTFGDDSRDWFPHPSPDGKWIAFI 438



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 76/219 (34%), Gaps = 17/219 (7%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +  + G        V         ++ + ++   G   R +TP  +   +   +SP+ +
Sbjct: 287 KMNNDHGFSPDGKEIVVSDQTEPDNQSRIHILPAAGGTPRLVTP--NGPSYWHGWSPDGK 344

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +AY      D   VY +         R+     +     +S++G+    +  +   M +
Sbjct: 345 TLAYIAQRGGD-YDVYSIPVG-GGPETRLTTTPGLDDGAEYSADGQWIYFNSVRSGNMKL 402

Query: 285 YSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESD----------REGKEQLYVMQS 333
           + +    +  E+LT      +     SPD   I F +                +L +M +
Sbjct: 403 WRMKSDGSGAEQLTFGDDSRDWFPHPSPDGKWIAFIAFGTDVAVGDHPANKDVELRLMPA 462

Query: 334 NGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEK 370
            G +   ++     + +   P WSP    IAF  +  ++
Sbjct: 463 AGGEAVVLAWLFGGQGTINVPSWSPDSKKIAFVSYRPKE 501


>gi|315453875|ref|YP_004074145.1| putative protein tolB [Helicobacter felis ATCC 49179]
 gi|315132927|emb|CBY83555.1| putative protein tolB precursor [Helicobacter felis ATCC 49179]
          Length = 414

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 74/416 (17%), Positives = 155/416 (37%), Gaps = 30/416 (7%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELG--GKVSEVVSKDLQR 75
            L   ++G     S  A + +     N   +     +++   +     K+  ++  DL+ 
Sbjct: 3   FLWFFILGWQMLWSADATLDIIK---NIEKLPSVAVRYLKNSQEPYLAKIYAMLLTDLKI 59

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S+    I   +  ++I        +    +  A +LV+ RV K G    +V  R +DV  
Sbjct: 60  SNHVKTIELGAQAEQI-------NYSALQAKQASLLVSLRVDKLG----QVNVRFYDVAH 108

Query: 136 RKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           +  +  K +  +    +  IAH ++ DI  ++      + +R +  ++ +  G+ K S+ 
Sbjct: 109 QSVLGIKDYTFNQKPLYPFIAHRVAIDINDALKAPPIAWMARFVIFAKYIKPGVTKISIA 168

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
             D      + +  +   +   P+++  +Q   Y T        +       D   + I 
Sbjct: 169 --DYTLTYKQDIIDNG-MLNVFPKWANAEQSAFYYTQYLHHPTII--KYNLRDGTSEVIT 223

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               M      S NG++ L+++  +   DIY  D     + RLT    I++  ++  +  
Sbjct: 224 QSEGMATVSSVSRNGRKLLLTLAPNGQSDIYLYDTAKKNSIRLTKYQGIDVLGNFVGNEK 283

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---- 370
            +VF SDR G   +Y  +        I Q    S  +   +  G+ I +           
Sbjct: 284 GMVFVSDRAGYPNVYFKKLQPDAP--IEQVVFYSKNNDSVAASGNNIVYVSRENRDENGQ 341

Query: 371 --FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F +  +       R L      Q P +S  G+++++ +K    +   +  +D N
Sbjct: 342 ISFNLHFITLKSDYVRRLTASGINQMPRFSQDGKAVMYLKKASQQSALGVILLDYN 397


>gi|91793532|ref|YP_563183.1| WD-40-like beta propeller repeat-containing protein [Shewanella
           denitrificans OS217]
 gi|91715534|gb|ABE55460.1| WD40-like beta Propeller [Shewanella denitrificans OS217]
          Length = 292

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 59/224 (26%), Positives = 107/224 (47%), Gaps = 7/224 (3%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA--TY 231
           + + + V +    G    S+  M+ DG N + LT  +++    P +SP+ +K+ +A    
Sbjct: 71  DGKKIAVRQYHDDGKT-WSIHTMNSDGTNWKRLTHEKNKWDSVPAWSPDGKKIVFAREYK 129

Query: 232 DDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           D E + +  +     D + + +I + +     P F+ +G+    S   D+  +I   ++ 
Sbjct: 130 DPEGVFQAEIWLMNADGSKQTQIESLKGSN--PHFTPDGRIVFSSEFNDKKSEISIANID 187

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            +   +LT+          SPD   I F S R+G +++YVM S+GS+QKR++ +     F
Sbjct: 188 GSKVIQLTDNEAEEWHPEVSPDGKHIAFMSKRDGNQEIYVMNSDGSNQKRLTFNNVGDSF 247

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            P WSP    I FT F+   + I +M KDGS  R ++   +   
Sbjct: 248 -PSWSPDSSEILFTHFADTGWDIYIMNKDGSSSRKILSGRDAMF 290



 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 118/272 (43%), Gaps = 17/272 (6%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYD 232
           +S +L  S  +      + + + DR+G +   +       +    +SP+ +K+A    +D
Sbjct: 26  DSPVLDSSHIIAVSGAGSKIYLTDREGQSSINIPNVTGDYV---TWSPDGKKIAVRQYHD 82

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-----AMDIYSV 287
           D     ++ M++      +           P +S +GK+ + + +  +       +I+ +
Sbjct: 83  DGKTWSIHTMNSDGTNWKRLTHEKNKWDSVPAWSPDGKKIVFAREYKDPEGVFQAEIWLM 142

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKE 346
           +   +   ++ +    N    ++PD  +IVF S+  + K ++ +   +GS   +++ D E
Sbjct: 143 NADGSKQTQIESLKGSN--PHFTPDG-RIVFSSEFNDKKSEISIANIDGSKVIQLT-DNE 198

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
           A  + P  SP G  IAF         I VM  DGS ++ L   +     P+WSP    ++
Sbjct: 199 AEEWHPEVSPDGKHIAFMSKRDGNQEIYVMNSDGSNQKRLTFNNVGDSFPSWSPDSSEIL 258

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           F+     DTG  +Y ++ +G +   I +   A
Sbjct: 259 FT--HFADTGWDIYIMNKDGSSSRKILSGRDA 288



 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 102/233 (43%), Gaps = 21/233 (9%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   +   +     I             P   G++        +S +GK+  +    D+ 
Sbjct: 31  DSSHIIAVSGAGSKIYLTDREGQSSINIPNVTGDY------VTWSPDGKKIAVRQYHDDG 84

Query: 282 --MDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFES---DREGKEQ--LYVMQS 333
               I++++      +RLT+     +   ++SPD  +IVF     D EG  Q  +++M +
Sbjct: 85  KTWSIHTMNSDGTNWKRLTHEKNKWDSVPAWSPDGKKIVFAREYKDPEGVFQAEIWLMNA 144

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNL 392
           +GS Q +I   K ++   P ++P G ++  ++F+ +K  I +   DGS+   L ++ +  
Sbjct: 145 DGSKQTQIESLKGSN---PHFTPDGRIVFSSEFNDKKSEISIANIDGSKVIQLTDNEAEE 201

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVG 444
             P  SP G+ + F  K+DG    ++Y ++ +G N+  +       S P W  
Sbjct: 202 WHPEVSPDGKHIAFMSKRDG--NQEIYVMNSDGSNQKRLTFNNVGDSFPSWSP 252



 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 103/225 (45%), Gaps = 19/225 (8%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEKGDFNS---------RILFVS-E 182
           D K+I  +++     +W    HT++ D   ++ +T EK  ++S         +I+F    
Sbjct: 71  DGKKIAVRQYHDDGKTW--SIHTMNSDGTNWKRLTHEKNKWDSVPAWSPDGKKIVFAREY 128

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G+ +  + +M+ DG+    +   +      P F+P+  ++ +++  ++    + + 
Sbjct: 129 KDPEGVFQAEIWLMNADGSKQTQIESLKGS---NPHFTPDG-RIVFSSEFNDKKSEISIA 184

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +    +  + + +  +    P  S +GK      ++D   +IY ++   +  +RLT    
Sbjct: 185 NIDGSKVIQ-LTDNEAEEWHPEVSPDGKHIAFMSKRDGNQEIYVMNSDGSNQKRLTFNNV 243

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +   S+SPDSS+I+F    +    +Y+M  +GS  ++I   ++A
Sbjct: 244 GDSFPSWSPDSSEILFTHFADTGWDIYIMNKDGSSSRKILSGRDA 288


>gi|109947174|ref|YP_664402.1| translocation protein TolB [Helicobacter acinonychis str. Sheeba]
 gi|109714395|emb|CAJ99403.1| tolB protein [Helicobacter acinonychis str. Sheeba]
          Length = 417

 Score =  160 bits (406), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 67/414 (16%), Positives = 153/414 (36%), Gaps = 25/414 (6%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDV 78
           L L L+G  +  +I   + +         + +      +      K+ EV+  DL+ S  
Sbjct: 4   LWLFLMGSVWLFAIDKTLDIVKTIQKLPKIEV-RYSIDNDANYALKLHEVLINDLKTSQH 62

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F++              S   + D  +   Q++    V  E  +++    RL+DV     
Sbjct: 63  FDV--------SENKEQSAINYADLKNKKFQLVALVSVAVENGNKIS-RLRLYDVNTSTL 113

Query: 139 IIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
                +    A      AH ++  +   +      +  R +  S+ + SG+   +L    
Sbjct: 114 TKTFDYPILSADLYPFTAHNMAIAVNDYLKAPSIAWMKRFIVFSKYISSGVTSIALADYT 173

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
                 +      +++   P+++  +Q   Y T   E    +   + +     + I + +
Sbjct: 174 M---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERKPMILKYNIQKGTH-QSIASSQ 229

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            M +    SS+G + L+S+      D+Y  D+    + ++T    I++S  +  D   + 
Sbjct: 230 GMAVVSSVSSDGSKILMSLAPKGQPDVYLYDVHKKTSTKITRYPGIDVSGVFLEDDKSMA 289

Query: 318 FESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EK 370
           F SDR G   +Y+ +       +++  + +++     +    D I +             
Sbjct: 290 FVSDRSGYPNIYMKKLGLNESAEQLVYEGKSNESIDAY---KDGIVYVSRENLNEFGKTV 346

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           F + ++  +    R L  +   Q P +S  G+++++ +K   +    L  +D N
Sbjct: 347 FNLNLITLNSKYIRRLTVNGVNQMPRFSVDGKNIMYIKKTPQEYAMGLILLDYN 400


>gi|93005276|ref|YP_579713.1| WD-40-like beta propeller repeat-containing protein [Psychrobacter
           cryohalolentis K5]
 gi|92392954|gb|ABE74229.1| WD40-like beta Propeller [Psychrobacter cryohalolentis K5]
          Length = 340

 Score =  160 bits (405), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 62/289 (21%), Positives = 107/289 (37%), Gaps = 22/289 (7%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              D    I +V E  V     ++L  +  DG+ ++ +    +  ++ P +S + Q +AY
Sbjct: 59  PAIDRQGYIAYVEEQGVGTAKISTLYRIRPDGSGLQLI-DQLNGYIYAPTWSADGQMLAY 117

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           +        ++Y+ D +       + N     L+P FS +GK+ L S       DIY + 
Sbjct: 118 SKQAARQHPKIYIYDVKSSSH-NLVVNVEGSNLSPSFSPDGKKLLYSSTVGGNADIYEMQ 176

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRISQDKE 346
           L   +T++LT      +  SY+ D    V+ SD  R G+  +Y       +   I+    
Sbjct: 177 LSDGSTKQLTTLPSTEVQPSYASDGQSFVYTSDKVRAGRPSIYRYSFATGNAALITTGGY 236

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           A+   P  S     +A+           VM     Q   L E    +    SPSG+  ++
Sbjct: 237 AA--SPQLSLDSQRLAYLNGR----KAAVMMLTTGQVINLAETGLDEPARLSPSGQYALY 290

Query: 407 SRKKDG----------DTGSKLYSIDLNGRNETLIN--TPAYASDPQWV 443
             ++             +G  L    L G     I+  T      P W 
Sbjct: 291 PTRQSNLGGQVGGQSSQSGGSLVIHSLAGNTSYAISSKTGGVVRSPIWG 339


>gi|299140155|ref|ZP_07033323.1| transcriptional regulator domain protein [Acidobacterium sp.
           MP5ACTX8]
 gi|298597884|gb|EFI54054.1| transcriptional regulator domain protein [Acidobacterium sp.
           MP5ACTX8]
          Length = 752

 Score =  160 bits (404), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 71/280 (25%), Positives = 117/280 (41%), Gaps = 18/280 (6%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
             ++   +GD+   I FV     S      + VM   G   R L  +   I     +S +
Sbjct: 360 VNAVFSPQGDW---IAFVRARGPSSA---EIHVMPAHGGPDRVLPFNIHSINGL-TWSAD 412

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEA 281
            Q +  A+     +  ++ +       P  +    +    P  S  G R     + ++ +
Sbjct: 413 GQSLLVASSRALSVGNLWKLSLN-GDPPVALSTLPAHTEDPVVSPKGHRLAYIDLLRNGS 471

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           +   S D      E+L  + FI+ +  YSPD S+I FESDR G  +++V +++G+  KR+
Sbjct: 472 LWRMSTDGHGKQ-EQLIASRFIDSAPDYSPDGSEIAFESDRTGASEIWVCKNDGTQCKRL 530

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-----PT 396
           +     +   P WSP G L+AF      + AI V+   G    LLV     +A     P 
Sbjct: 531 TNIFGPNTSSPRWSPDGKLLAFNSGFHGRSAIFVVNASGGIP-LLVTTGAFEAADNLIPN 589

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           WS  G+SL FS  + G    +++   +NG  E  I     
Sbjct: 590 WSRDGQSLYFSSNRTGRF--EVWKTKVNGDEERQITQHGG 627



 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 100/251 (39%), Gaps = 11/251 (4%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              SL  M  DG   +    +   I   P +SP+  ++A+ + D      +++      +
Sbjct: 468 RNGSLWRMSTDGHGKQEQLIASRFIDSAPDYSPDGSEIAFES-DRTGASEIWVCKNDGTQ 526

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL---FINI 305
             +    F     +PR+S +GK    +        I+ V+        +T        N+
Sbjct: 527 CKRLTNIFGPNTSSPRWSPDGKLLAFNSGFHGRSAIFVVNASGGIPLLVTTGAFEAADNL 586

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++S D   + F S+R G+ +++  + NG ++++I+Q    +  +   S  G  + +  
Sbjct: 587 IPNWSRDGQSLYFSSNRTGRFEVWKTKVNGDEERQITQHGGYNGME---SADGKSLYYI- 642

Query: 366 FSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKK-DGDTGSKLYSIDL 423
              +K  I  +  +G + + +     +     W   G  L + +KK +G   + ++ +DL
Sbjct: 643 QDTDKTTIWRIPLNGGEAQPVAGPLGSGMWGYWMVVGEDLYYLQKKMEGTALADVFRVDL 702

Query: 424 -NGRNETLINT 433
             G    L  T
Sbjct: 703 KTGSKTKLGQT 713



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 55/313 (17%), Positives = 118/313 (37%), Gaps = 30/313 (9%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS------LCVMDRDGANIRYLT 207
           + H  SD   + +T   G ++      + + ++    +       + +   D  +   L+
Sbjct: 196 LVHAASDS--RPLTSVPGVYSWPTFSPNGNSLAYSWHSDAGQDQAIYMQKVDSDDREKLS 253

Query: 208 PSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---- 262
                  F P +SP  +++AY    +D   L + +   +     + +    ++  A    
Sbjct: 254 DGGKS--FSPAWSPRGEEIAYLRATEDPKWLEIEVAKVQRPHTARHLAFINNLKSAFHDV 311

Query: 263 PR--FSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLF--INISASYSPDSSQI 316
           P   +S +G   + +     DE+  +  V L++   + LT+     ++++A +SP    I
Sbjct: 312 PTLNWSPDGSWLVTTEKEDADESSHLELVSLENGEKQALTHPPALSVDVNAVFSPQGDWI 371

Query: 317 VFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEKFAIG 374
            F   R     +++VM ++G    R+      S     WS  G  L+  +  +     + 
Sbjct: 372 AFVRARGPSSAEIHVMPAHGG-PDRVLPFNIHSINGLTWSADGQSLLVASSRALSVGNLW 430

Query: 375 VMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN--GRNETLI 431
            +  +G     L    ++ + P  SP G  L +    D      L+ +  +  G+ E LI
Sbjct: 431 KLSLNGDPPVALSTLPAHTEDPVVSPKGHRLAYI---DLLRNGSLWRMSTDGHGKQEQLI 487

Query: 432 NTPAYASDPQWVG 444
            +    S P +  
Sbjct: 488 ASRFIDSAPDYSP 500



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/296 (12%), Positives = 81/296 (27%), Gaps = 63/296 (21%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
            D+     +            + IA    D        +     S I F S+   +    
Sbjct: 464 IDLLRNGSLWRMSTDGHGKQEQLIASRFIDSA-----PDYSPDGSEIAFESDRTGA---- 514

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMDTRIDRA 249
           + + V   DG   + LT         PR+SP+ + +A+ + +     + V      I   
Sbjct: 515 SEIWVCKNDGTQCKRLTNIFGPNTSSPRWSPDGKLLAFNSGFHGRSAIFVVNASGGIPLL 574

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
                   +  L P +S +G+    S  +    +++   +  +   ++T     N     
Sbjct: 575 VTTGAFEAADNLIPNWSRDGQSLYFSSNRTGRFEVWKTKVNGDEERQITQHGGYNGME-- 632

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--------------------------- 342
           S D   + +  D + K  ++ +  NG + + ++                           
Sbjct: 633 SADGKSLYYIQDTD-KTTIWRIPLNGGEAQPVAGPLGSGMWGYWMVVGEDLYYLQKKMEG 691

Query: 343 -----------------------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                                              SP    I + +   ++  I +
Sbjct: 692 TALADVFRVDLKTGSKTKLGQTQFGVNEYDRGLAVSPDERWILYAERDVDRSNIML 747



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 87/196 (44%), Gaps = 24/196 (12%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLY 329
            ++ V          V   S  +  LT+   +    ++SP+ + + +   SD    + +Y
Sbjct: 182 VVMRVSYSRHHQAGLVHAAS-DSRPLTSVPGVYSWPTFSPNGNSLAYSWHSDAGQDQAIY 240

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----KFAIGVMKKDGSQERL 385
           + + +  D++++S   ++  F P WSP+G+ IA+ + + +    +  +  +++  +   L
Sbjct: 241 MQKVDSDDREKLSDGGKS--FSPAWSPRGEEIAYLRATEDPKWLEIEVAKVQRPHTARHL 298

Query: 386 LV----EDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPA--- 435
                 + +    PT  WSP G  L+ + K+D D  S L  + L NG  + L + PA   
Sbjct: 299 AFINNLKSAFHDVPTLNWSPDGSWLVTTEKEDADESSHLELVSLENGEKQALTHPPALSV 358

Query: 436 -----YASDPQWVGFM 446
                ++    W+ F+
Sbjct: 359 DVNAVFSPQGDWIAFV 374



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 37/109 (33%), Gaps = 1/109 (0%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVEDSNLQAP 395
              R++       F  V S    +I   + S  +    G++        L         P
Sbjct: 157 PVSRLTTRASWGIFVAVLSAFVVIIVVMRVSYSRHHQAGLVHAASDSRPLTSVPGVYSWP 216

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           T+SP+G SL +S   D      +Y   ++  +   ++    +  P W  
Sbjct: 217 TFSPNGNSLAYSWHSDAGQDQAIYMQKVDSDDREKLSDGGKSFSPAWSP 265


>gi|33321858|gb|AAQ06664.1| antigen P49Hb65 [Helicobacter bilis]
          Length = 428

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 68/415 (16%), Positives = 158/415 (38%), Gaps = 21/415 (5%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVS-IAFTKFVSIDELGGKVSEVVSKDLQRS 76
                 +       ++A  K    +     +  I        D     + +++ +DL+  
Sbjct: 10  IFAFCAMFAMHSVGLYAEDKTIVVTRQTDNIPNIQVVSSDGADNT-MAIYKMLVQDLKTL 68

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             FN+   D+ K  I   +     QD+ +     +      K+G   L     L++    
Sbjct: 69  GHFNVYYDDTLKTDILQNNLA--LQDYKNKNMNFIAQVSQKKKG-GSLIATLSLYEYASG 125

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           K I  +        +  IAH ++  +   I     D+ +R +  S  V SG  ++++ + 
Sbjct: 126 KTITTEYREDETERYPFIAHAMASYLNDCIKAPNADWLNRYVVFSNYVGSG--RSNILIA 183

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D      + +    + +   P+++ ++Q+  Y T        +Y  +    +  K I + 
Sbjct: 184 DYTFTYQKTII--SNGLNMFPKWADSKQEEFYYTLVT-HEATIYKYNMYSGKNEKVISS- 239

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           + M +    S +G + L+S+      DI+  +++S    +LT    I+++A ++ +    
Sbjct: 240 QGMAVVSDVSKHGDKLLLSLAPVGLSDIFLYEVKSKKLTQLTRYSGIDVNAHFTNNEKSF 299

Query: 317 VFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK----- 370
           VF SDR G   +++      ++  +I      +     +   G  I ++    ++     
Sbjct: 300 VFVSDRLGYPNIFMQDLMPNANVTQIVFKGRNNSTLSTF---GQYIVYSSRESDEETGLN 356

Query: 371 -FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            F + ++       R L +    + P +S  G S++F R++  +    +  + +N
Sbjct: 357 VFNLYLVSAHSDYVRRLSKIGTNRIPAFSHDGDSIMFLRQQKNEQAIGIIRLSIN 411


>gi|237751471|ref|ZP_04581951.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229372837|gb|EEO23228.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 428

 Score =  159 bits (403), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 68/415 (16%), Positives = 158/415 (38%), Gaps = 21/415 (5%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVS-IAFTKFVSIDELGGKVSEVVSKDLQRS 76
                 +       ++A  K    +     +  I        D     + +++ +DL+  
Sbjct: 10  IFAFCAMFAMHSVGLYAEDKTIVVTRQTDNIPNIQVVSSDGADNT-MAIYKMLVQDLKTL 68

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             FN+   D+ K  I   +     QD+ +     +      K+G   L     L++    
Sbjct: 69  GHFNVYYDDTLKTDILQNNLA--LQDYKNKNMNFIAQVSQKKKG-GSLIATLSLYEYASG 125

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           K I  +        +  IAH ++  +   I     D+ +R +  S  V SG  ++++ + 
Sbjct: 126 KTITTEYREDEIERYPFIAHAMASYLNDYIKAPNADWLNRYVVFSNYVGSG--RSNILIA 183

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D      + +    + +   P+++ ++Q+  Y T        +Y  +    +  K I + 
Sbjct: 184 DYTFTYQKTII--SNGLNMFPKWADSKQEEFYYTLVT-HEATIYKYNMYSGKNEKVISS- 239

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           + M +    S +G + L+S+      DI+  +++S    +LT    I+++A ++ +    
Sbjct: 240 QGMAVVSDVSKHGDKLLLSLAPVGLSDIFLYEIKSKKLTQLTRYSGIDVNAHFTNNEKSF 299

Query: 317 VFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK----- 370
           VF SDR G   +++      ++  +I      +     +   G  I ++    ++     
Sbjct: 300 VFVSDRLGYPNIFMQDLMPNANVTQIVFKGRNNSTLSTF---GQYIVYSSRESDEETGLN 356

Query: 371 -FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            F + ++       R L +    + P +S  G S++F R++  +    +  + +N
Sbjct: 357 VFNLYLVSAHSDYVRRLSKIGTNRIPAFSHDGDSIMFLRQQKNEQAIGIIRLSIN 411


>gi|297845142|ref|XP_002890452.1| hypothetical protein ARALYDRAFT_472406 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336294|gb|EFH66711.1| hypothetical protein ARALYDRAFT_472406 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 706

 Score =  159 bits (403), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 75/396 (18%), Positives = 136/396 (34%), Gaps = 57/396 (14%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
            ++ +S   +   P  +  F    S      +     + G D   VE  L+D+  R + I
Sbjct: 297 PLTTESVTIQRVTPPGVHAFTPATSPNNHEFIAVATRRPGSDYRHVE--LFDL-KRNEFI 353

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
                 +P S+        D         +G+ N R   +            L +   DG
Sbjct: 354 ELTRLVAPKSYHLNPFLSPDSSRVGYHSCRGEANGRRSPLLFLENIQTTTTDLSLFRIDG 413

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +               P FSP   ++AY       +  V+++        +    +  M 
Sbjct: 414 S--------------FPSFSPGGDRIAYV-----KMPGVFVVKPDGSGQREV---YNGMA 451

Query: 261 LAPRFSSNGKRALISVQKDEAM------DIYSVDLQ----SNATERLTNTLFINISASYS 310
            +  +       + S             D+ S+++     S++  RLT     N     S
Sbjct: 452 FSTAWDPVRPGVVYSSSGPTFATERTEVDVISIEVDAADKSSSVRRLTTNGKNNAFPWPS 511

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS- 367
           PD  +IVF S R G + LY+M +   +   + +  E ++ D    WSP G+ IAF     
Sbjct: 512 PDGKRIVFRSGRTGHKNLYIMDAEKGESGGLWRLTEGAWTDTMCNWSPDGEWIAFASDRE 571

Query: 368 ---GEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDG--------- 412
                 F + ++  +G+  R L+          P +SP  +SL+F+    G         
Sbjct: 572 SPGSGSFELFLIHPNGTGLRKLIQSGTGGRTNHPIFSPDSKSLVFTSDYAGISAEPISNP 631

Query: 413 ---DTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
                   ++++ L+G N   +   +Y    P W  
Sbjct: 632 HHYQPYGDIFTVKLDGSNLRRLTHNSYEDGTPAWAP 667



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 77/261 (29%), Gaps = 42/261 (16%)

Query: 220 SPNQQKVAYATYDDEDILR------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           S + + + Y +  +           VY  + +     +R+        +P  S +G    
Sbjct: 166 SLSGEFLVYVSTHENSGEPRTSWTAVYSTELKTG-LTRRLTPSGVADFSPAVSPSGNLTA 224

Query: 274 ISVQKDEA---------MDIYSVDL-QSNATERLTNTLFINISASYSPDSSQIVF--ESD 321
           ++   +            DIY           ++           +  D + + F   S+
Sbjct: 225 VASYGERGWTGEVEELSTDIYVFSTRDGTHRVKVVEHGGW---PCWV-DETTLYFHRRSE 280

Query: 322 REGKEQLY--VMQSNGS------DQKRISQDKEASYFDPVWSPQG-DLIAFTKFSGEK-- 370
            +G   +Y  ++  NG         +R++     + F P  SP   + IA          
Sbjct: 281 EDGWISVYRAILPENGPLTTESVTIQRVTPPGVHA-FTPATSPNNHEFIAVATRRPGSDY 339

Query: 371 FAIGVMKKDGSQ----ERLLVEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKLYSIDL 423
             + +     ++     RL+   S    P  SP    + +   +    G     L+  ++
Sbjct: 340 RHVELFDLKRNEFIELTRLVAPKSYHLNPFLSPDSSRVGYHSCRGEANGRRSPLLFLENI 399

Query: 424 NGRNETLINTPAYASDPQWVG 444
                 L       S P +  
Sbjct: 400 QTTTTDLSLFRIDGSFPSFSP 420



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 63/189 (33%), Gaps = 34/189 (17%)

Query: 263 PRFSSNGKRALISVQ-------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           P  S  G+  +           +     +YS +L++  T RLT +   + S + SP  + 
Sbjct: 165 PSLS--GEFLVYVSTHENSGEPRTSWTAVYSTELKTGLTRRLTPSGVADFSPAVSPSGNL 222

Query: 316 IVFES--DREGKEQ-------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
               S  +R    +       +YV  +     +    +       P W      + F + 
Sbjct: 223 TAVASYGERGWTGEVEELSTDIYVFSTRDGTHRVKVVEHGG---WPCWV-DETTLYFHRR 278

Query: 367 SGEKFAIGVMKK----DG-------SQERLLVEDSNLQAPTWSPSG-RSLIFSRKKDGDT 414
           S E   I V +     +G       + +R+     +   P  SP+    +  + ++ G  
Sbjct: 279 SEEDGWISVYRAILPENGPLTTESVTIQRVTPPGVHAFTPATSPNNHEFIAVATRRPGSD 338

Query: 415 GSKLYSIDL 423
              +   DL
Sbjct: 339 YRHVELFDL 347


>gi|237751978|ref|ZP_04582458.1| translocation protein TolB [Helicobacter winghamensis ATCC BAA-430]
 gi|229376545|gb|EEO26636.1| translocation protein TolB [Helicobacter winghamensis ATCC BAA-430]
          Length = 418

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 65/420 (15%), Positives = 173/420 (41%), Gaps = 28/420 (6%)

Query: 23  LIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID----ELGGKVSEVVSKDLQRSDV 78
           L G      + A ++V     N   +     + V  D    E   ++ +++  DL+ +  
Sbjct: 3   LFGLACANGVDATLEVVKKFGN---LPNILVQNVGSDYFEREFSQRIFKMLIADLKVTGH 59

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F +  +    +++ + + +  F ++      ++   +  K     +     L+DV     
Sbjct: 60  FTVQEE----KEVISSEMLVNFDEYRKNKIDLVARIKAEKSESGVI-ARLHLYDVNSGLV 114

Query: 139 IIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
            + K++ +    ++  +AH ++ DI   I     D+  R++ ++     G  ++ + + D
Sbjct: 115 ALSKEYKNMQQETYPFLAHKMAIDINAYIKAPSVDWMERMVILAYYTKPG--ESDIIMSD 172

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
                 + +      +   P+++   Q   Y T   +    ++  D    +  K++ +  
Sbjct: 173 YTLTYKKKVISG--GLNIFPKWANAAQNAFYYTKYLDKP-TLFKFDLGTGQN-KKMFDSS 228

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            M++A   S++  + L+++  +E  DI+  D+ + A +RLT    I++S ++  +  +++
Sbjct: 229 GMLVASDVSNDENKILVTMAPNEQPDIFMYDITNGALKRLTKYSGIDVSGNFIDNEERVM 288

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------F 371
           F SDR G   ++ + ++G     + Q       +   +  G+ I ++     +      F
Sbjct: 289 FISDRLGYPNVFAIPASGEVSGNVEQMVFHGRNNNAANANGNYIVYSSRESNEEFDRNTF 348

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            + ++       R L  +   Q P +S  G ++++ + +   +   +  ++    N+TL+
Sbjct: 349 NLYLVSTKSDFIRRLSANGVNQLPRFSKDGETIMYIKHEANQSALGIIRLN---YNKTLL 405


>gi|226225576|ref|YP_002759682.1| hypothetical protein GAU_0170 [Gemmatimonas aurantiaca T-27]
 gi|226088767|dbj|BAH37212.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 380

 Score =  159 bits (402), Expect = 8e-37,   Method: Composition-based stats.
 Identities = 61/290 (21%), Positives = 116/290 (40%), Gaps = 50/290 (17%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           ++   + G + +      +S   G   +   VM  DG  +  ++           F P  
Sbjct: 83  EAYFSQDGQWLT-----FQSTRDGRACDQQYVMRVDGTGLTKVSVGGKTTCGW--FLPGG 135

Query: 224 QKVAYATYD--------DEDILRVYLMDT---------RIDRAPKRIGNFRSMILAPRFS 266
            K+ +A+            D  + Y+            R  +   R+ N+         S
Sbjct: 136 NKLFFASTHAADSACPPRPDPSKGYVWGIDKYDIYTADRDGQNLTRLTNYGVYTAEGVLS 195

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----- 321
            +GKR + +  KD  +DIY++++     +RLT T   +    +SPD ++IV+ +      
Sbjct: 196 PDGKRIVFTSLKDGDLDIYTMNVDGTDVKRLTTTPGYDGGPWWSPDGTKIVYRAWHYDND 255

Query: 322 ---------------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
                          R  K +L+VM ++GSDQ++I++   A+ F P W+P G  + F+  
Sbjct: 256 TDLKAYQELLKQNMIRPNKMELFVMNADGSDQRQITKLGGAN-FGPSWTPDGQRVIFSSN 314

Query: 367 ----SGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                   F + ++  DG+  E++         P +SP G  LI++  + 
Sbjct: 315 HKNPRSRNFDLYIVGLDGNNLEQVTTNGEFDGFPMFSPDGTKLIWASNRG 364



 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 62/288 (21%), Positives = 98/288 (34%), Gaps = 49/288 (17%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSM 259
            NIR +T   +       FS + Q + + +  D     + Y+M        K   +    
Sbjct: 70  TNIRQITNGGENAEAY--FSQDGQWLTFQSTRDGRACDQQYVMRVDGTGLTKV--SVGGK 125

Query: 260 ILAPRFSSNGKRALISVQ-------------------KDEAMDIYSVDLQSNATERLTNT 300
                F   G +   +                       +  DIY+ D       RLTN 
Sbjct: 126 TTCGWFLPGGNKLFFASTHAADSACPPRPDPSKGYVWGIDKYDIYTADRDGQNLTRLTNY 185

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                    SPD  +IVF S ++G   +Y M  +G+D KR++         P WSP G  
Sbjct: 186 GVYTAEGVLSPDGKRIVFTSLKDGDLDIYTMNVDGTDVKRLTT-TPGYDGGPWWSPDGTK 244

Query: 361 IAFTKF--------------------SGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSP 399
           I +  +                       K  + VM  DGS +R + +       P+W+P
Sbjct: 245 IVYRAWHYDNDTDLKAYQELLKQNMIRPNKMELFVMNADGSDQRQITKLGGANFGPSWTP 304

Query: 400 SGRSLIFSRKKDGD--TGSKLYSIDLNGRNETLINTPA-YASDPQWVG 444
            G+ +IFS            LY + L+G N   + T   +   P +  
Sbjct: 305 DGQRVIFSSNHKNPRSRNFDLYIVGLDGNNLEQVTTNGEFDGFPMFSP 352



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 4/71 (5%)

Query: 369 EKFAIGVMKKDG----SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               I V    G    +  R +          +S  G+ L F   +DG    + Y + ++
Sbjct: 54  GALNIAVTADSGEAHLTNIRQITNGGENAEAYFSQDGQWLTFQSTRDGRACDQQYVMRVD 113

Query: 425 GRNETLINTPA 435
           G   T ++   
Sbjct: 114 GTGLTKVSVGG 124


>gi|256421833|ref|YP_003122486.1| hypothetical protein Cpin_2806 [Chitinophaga pinensis DSM 2588]
 gi|256036741|gb|ACU60285.1| WD40 domain protein beta Propeller [Chitinophaga pinensis DSM 2588]
          Length = 509

 Score =  159 bits (402), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 61/286 (21%), Positives = 110/286 (38%), Gaps = 22/286 (7%)

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGD-FNSRILFVSESVVSGIIKNSLCVMDRDG 200
           K++  S      IA   S  +YQ+    +   +N     +  +    + +  L       
Sbjct: 220 KQYIGSQLELMDIATQHSIIVYQTPGSIQAPNWNQDGQSLIYNKEGKLYQFDLRTRTPSP 279

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N      + +  +     S + + +A ++ + E+   V  +       P RI N     
Sbjct: 280 INTGVAKQNNNDHVL----SFDGKMLAISSGEGENGASVGYVVPHTGGDPVRI-NKVGPS 334

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S +GK  + + Q++   DIY V  +     RLT    ++    Y+PD   I F S
Sbjct: 335 YMHGWSPDGKYLVFTGQRNNDFDIYRVPAKGGEEVRLTTAPGLDDGPEYTPDGKYIYFNS 394

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-------- 372
            R G  Q++ M  +GS+Q +I+ D   ++F P  SP G  I F  F  E+          
Sbjct: 395 VRSGMMQIWRMAPDGSNQTQITNDDFHNWF-PHISPDGKWIVFLSFLKEEVDASDHPFYK 453

Query: 373 ---IGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKD 411
              + +M   G   +++         +  P+WSP  R + F    +
Sbjct: 454 HVYLRLMPATGGPAKVIAYLYGGQGTINTPSWSPDSRRIAFISNTN 499



 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 79/202 (39%), Gaps = 20/202 (9%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--INISASYSPDSS 314
              I AP ++ +G+  +     ++   +Y  DL++     +   +    N     S D  
Sbjct: 244 PGSIQAPNWNQDGQSLIY----NKEGKLYQFDLRTRTPSPINTGVAKQNNNDHVLSFDGK 299

Query: 315 QIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +   S     G    YV+   G D  RI  +K    +   WSP G  + FT      F 
Sbjct: 300 MLAISSGEGENGASVGYVVPHTGGDPVRI--NKVGPSYMHGWSPDGKYLVFTGQRNNDFD 357

Query: 373 IGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           I  +   G +E RL         P ++P G+ + F+  + G    +++ +  +G N+T I
Sbjct: 358 IYRVPAKGGEEVRLTTAPGLDDGPEYTPDGKYIYFNSVRSGMM--QIWRMAPDGSNQTQI 415

Query: 432 NT-------PAYASDPQWVGFM 446
                    P  + D +W+ F+
Sbjct: 416 TNDDFHNWFPHISPDGKWIVFL 437



 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 81/217 (37%), Gaps = 18/217 (8%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F+ ++L +S S       +   V+   G +   +  ++    +   +SP+ + + +    
Sbjct: 296 FDGKMLAIS-SGEGENGASVGYVVPHTGGDPVRI--NKVGPSYMHGWSPDGKYLVFTGQR 352

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           + D   +Y +  +      R+     +   P ++ +GK    +  +   M I+ +    +
Sbjct: 353 NND-FDIYRVPAKGGEEV-RLTTAPGLDDGPEYTPDGKYIYFNSVRSGMMQIWRMAPDGS 410

Query: 293 ATERLTNTLFINISASYSPDSSQIVFES------DREGKE-----QLYVMQSNGSDQKRI 341
              ++TN  F N     SPD   IVF S      D           L +M + G   K I
Sbjct: 411 NQTQITNDDFHNWFPHISPDGKWIVFLSFLKEEVDASDHPFYKHVYLRLMPATGGPAKVI 470

Query: 342 SQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +     + +   P WSP    IAF   +   F +  M
Sbjct: 471 AYLYGGQGTINTPSWSPDSRRIAFISNTNLLFPVFPM 507


>gi|213027106|ref|ZP_03341553.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 170

 Score =  159 bits (401), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 4/173 (2%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y M  N
Sbjct: 1   ALSKTGSLNLYVMDLASGQIRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQVYKMNIN 60

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G   +RI+ +   +  D   S  G  +     +  +  I          ++L      + 
Sbjct: 61  GGAAQRITWEGSQNQ-DADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSSTFLDET 119

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           P+ +P+G  +I+S  +    GS L  +  +GR +  L  T      P W  ++
Sbjct: 120 PSLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVKSPAWSPYL 170



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 68/166 (40%), Gaps = 4/166 (2%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             L +Y+MD    +  ++I + RS    P +  + +    +  +     +Y +++   A 
Sbjct: 6   GSLNLYVMDLASGQ-IRQITDGRSNNTEPTWFPDSQTLAFTSDQAGRPQVYKMNINGGAA 64

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +R+T     N  A  S D   +V  S   G++ +          + +S         P  
Sbjct: 65  QRITWEGSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSSTF--LDETPSL 122

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           +P G ++ ++   G    + ++  DG  + RL   D  +++P WSP
Sbjct: 123 APNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 168



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 48/169 (28%), Gaps = 46/169 (27%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     +L VMD     IR +T  R     EP + P+ Q +A+ +       +VY M+  
Sbjct: 3   SKTGSLNLYVMDLASGQIRQITDGRSN-NTEPTWFPDSQTLAFTSDQAGRP-QVYKMNIN 60

Query: 246 IDRAPKRIGNFRSMIL-------------------------------------------A 262
              A +RI    S                                               
Sbjct: 61  -GGAAQRITWEGSQNQDADVSSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSSTFLDET 119

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           P  + NG   + S  +     +  V        RL  T     S ++SP
Sbjct: 120 PSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 168


>gi|154173809|ref|YP_001408804.1| translocation protein TolB [Campylobacter curvus 525.92]
 gi|112803726|gb|EAU01070.1| protein TolB [Campylobacter curvus 525.92]
          Length = 421

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 68/415 (16%), Positives = 153/415 (36%), Gaps = 23/415 (5%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF---VSIDELGGKVSEVVSKDLQR 75
           + L L       +  A + V  N     P  IA       V       K  +++  DL+ 
Sbjct: 4   IFLFLCVALGLYAADATISV-INQGIALP-KIALQDATTAVGDANFKDKFFKIMLGDLKV 61

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  F +I         +  +   +    +  G +++    +       L ++ +L + K 
Sbjct: 62  SSDFEVIE----DHVPSTYEGTAQTNTMSDKGVELIFRYALEGSANSPLTLKVKLINAKT 117

Query: 136 RKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
                 K +     A +  +AH    ++   +      +  +  F+  S  +   ++S+ 
Sbjct: 118 ATTKYEKVYTMPDGAKYPFLAHKSIVELTNELNLPPVGWMEK--FIIFSKYTSARQSSIV 175

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V D      + +      +   P++    Q   Y T    +   ++  D       K I 
Sbjct: 176 VADYTLTYQKTIVSG--GLNIFPKWGGADQTKFYYTSYVNNKPTLFRYDLTSGTKTKIID 233

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +   M++A   S +G + L+++   +  DIY  ++ +    ++TN   I+++ ++    S
Sbjct: 234 SM-GMLIASDVSKDGSKILLTMAPKDQPDIYIYNIATKGLTQITNYPGIDVNGNFVDGDS 292

Query: 315 QIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGE 369
           +IVF SDR G   ++   +N G   +++    + +     +    + I ++         
Sbjct: 293 RIVFVSDRLGYPNVFATSANAGGTVEQMVFHGKNNNSVSTF---ENYIVYSSRESSGDAG 349

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            F I ++       R L        P +S  G+S++F ++  G +   +  ++ N
Sbjct: 350 TFNIYLISTQTDFIRQLTASGKNNYPRFSSDGQSVVFIKELGGQSSLGVVRLNEN 404


>gi|160889635|ref|ZP_02070638.1| hypothetical protein BACUNI_02061 [Bacteroides uniformis ATCC 8492]
 gi|270293977|ref|ZP_06200179.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|317479170|ref|ZP_07938307.1| hypothetical protein HMPREF1007_01423 [Bacteroides sp. 4_1_36]
 gi|156860627|gb|EDO54058.1| hypothetical protein BACUNI_02061 [Bacteroides uniformis ATCC 8492]
 gi|270275444|gb|EFA21304.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|316904658|gb|EFV26475.1| hypothetical protein HMPREF1007_01423 [Bacteroides sp. 4_1_36]
          Length = 369

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 85/206 (41%), Gaps = 16/206 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + Q++A +    ED              P+ I       L   +S +GK      +++
Sbjct: 163 STDGQQIAISHGTKEDYKSRIYTLPITGGTPRLITPMAPSYLH-GWSPDGKELAYCAERN 221

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              D+Y++  +     RLT    ++    YSP    I F S R G  Q++ M+++GS+Q 
Sbjct: 222 GNYDVYTIPAEGGEETRLTTAEGLDDGPEYSPCGQYIWFNSVRTGLMQVWRMKADGSEQT 281

Query: 340 RISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVMKKDGSQERLLVE 388
           +++ D+  + + P  SP G  + F              + +   + +M  +G + + L++
Sbjct: 282 QMTFDETRNSWFPHISPDGKSVVFITYYKGDLEPGEHLANKNVELRLMPANGGEPKTLLK 341

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKK 410
                  +   +W+P  + + F   +
Sbjct: 342 LFGGQGTINVNSWAPDSKRIAFVSYR 367



 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 57/277 (20%), Positives = 115/277 (41%), Gaps = 17/277 (6%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             F + +   + +     I + L ++D    N R +       +  P ++P+ Q + Y +
Sbjct: 72  IPFFATVALTATAQQKNEITSVLEILDVTNGN-RTVVKEFPYRIEAPNWTPDGQWLLYNS 130

Query: 231 YDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKRALIS--VQKDEAMDIYS 286
                  ++Y +       P+ I  G  ++       S++G++  IS   ++D    IY+
Sbjct: 131 EG-----KLYRLSPTSPAEPELINTGFAQNCNNDHVLSTDGQQIAISHGTKEDYKSRIYT 185

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           + +       +T  +  +    +SPD  ++ + ++R G   +Y + + G ++ R++   E
Sbjct: 186 LPITGGTPRLIT-PMAPSYLHGWSPDGKELAYCAERNGNYDVYTIPAEGGEETRLTT-AE 243

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
                P +SP G  I F         +  MK DGS++  +   E  N   P  SP G+S+
Sbjct: 244 GLDDGPEYSPCGQYIWFNSVRTGLMQVWRMKADGSEQTQMTFDETRNSWFPHISPDGKSV 303

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +F     GD     +  +   +N  L   PA   +P+
Sbjct: 304 VFITYYKGDLEPGEHLAN---KNVELRLMPANGGEPK 337



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 35/99 (35%), Gaps = 12/99 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI------------LRV 239
            +  M  DG+    +T    +  + P  SP+ + V + TY   D+            LR+
Sbjct: 269 QVWRMKADGSEQTQMTFDETRNSWFPHISPDGKSVVFITYYKGDLEPGEHLANKNVELRL 328

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
              +    +   ++   +  I    ++ + KR      +
Sbjct: 329 MPANGGEPKTLLKLFGGQGTINVNSWAPDSKRIAFVSYR 367


>gi|262199569|ref|YP_003270778.1| beta-propeller repeat-containing to-pal system protein TolB
           [Haliangium ochraceum DSM 14365]
 gi|262082916|gb|ACY18885.1| beta-propeller repeat-containing to-pal system protein TolB
           [Haliangium ochraceum DSM 14365]
          Length = 362

 Score =  158 bits (400), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 62/295 (21%), Positives = 121/295 (41%), Gaps = 19/295 (6%)

Query: 164 QSITGEKGD--------FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           + +T ++GD            +L ++   +  + K  L ++   G  +  L   R +   
Sbjct: 70  RQLTKDEGDEYPAAAIPGQDALLVIAARDLGDVHKEQLQLVRLSGERVGSLHAPRGR-SR 128

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P  +P+   +  A  D E    +  M    +   + I + ++    P  S +G +    
Sbjct: 129 NPSVAPDGSWLV-AESDAEGFSNLVRMTPAPEAEARSIQDAKAGSFEPSISPDGTQIAFV 187

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +D   ++Y  D Q     RLT+    + +  +SPD   I F S+RE + ++++++ +G
Sbjct: 188 SSRDGDPELYLSDAQGQDVRRLTHFHLEDWAPQWSPDGRYIAFLSNREKRARVFLIRPDG 247

Query: 336 SDQKRISQ-DKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVM----KKDGSQERLLVED 389
           S  + +S         D  W P+G  + F  +    K  +  +       G    L    
Sbjct: 248 SGTRAVSGMAATGDERDIAWHPEGGSLVFVGRMDDGKTRLWKVEIGDDAVGEPVALTDGS 307

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWV 443
           S    P WSP G+ L+F  +++G+T   LY +  +G  +T +   P     P+W+
Sbjct: 308 SRDDQPAWSPDGKYLVFVSEREGNT--DLYLMRADGSGQTRLTEAPGADWLPRWL 360



 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 64/298 (21%), Positives = 113/298 (37%), Gaps = 24/298 (8%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D        E+GD    I FVSE          + +    G   +      D+    P  
Sbjct: 31  DPAAPMSMDERGDIPGAIAFVSERGDD----KDVWLTTPTGEERQLTKDEGDE---YPAA 83

Query: 220 SPNQQK--VAYATYDDEDILRVYLMDTRIDRAPKRIGNF---RSMILAPRFSSNGKRALI 274
           +   Q   +  A  D  D+ +  L   R+    +R+G+    R     P  + +G   + 
Sbjct: 84  AIPGQDALLVIAARDLGDVHKEQLQLVRLSG--ERVGSLHAPRGRSRNPSVAPDGSWLVA 141

Query: 275 SVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
               +   ++  +          + +    +   S SPD +QI F S R+G  +LY+  +
Sbjct: 142 ESDAEGFSNLVRMTPAPEAEARSIQDAKAGSFEPSISPDGTQIAFVSSRDGDPELYLSDA 201

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDS 390
            G D +R++      +  P WSP G  IAF     ++  + +++ DGS  R +       
Sbjct: 202 QGQDVRRLTHFHLEDW-APQWSPDGRYIAFLSNREKRARVFLIRPDGSGTRAVSGMAATG 260

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI----DLNGRNETLINTPAYASDPQWVG 444
           + +   W P G SL+F  + D D  ++L+ +    D  G    L +  +    P W  
Sbjct: 261 DERDIAWHPEGGSLVFVGRMD-DGKTRLWKVEIGDDAVGEPVALTDGSSRDDQPAWSP 317



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 61/187 (32%), Gaps = 59/187 (31%)

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQD------------------------------- 344
           I F S+R   + +++    G +++++++D                               
Sbjct: 48  IAFVSERGDDKDVWLTTPTG-EERQLTKDEGDEYPAAAIPGQDALLVIAARDLGDVHKEQ 106

Query: 345 ----------------KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                                 +P  +P G  +     +     +  M      E   ++
Sbjct: 107 LQLVRLSGERVGSLHAPRGRSRNPSVAPDGSWLVAESDAEGFSNLVRMTPAPEAEARSIQ 166

Query: 389 DSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASD 439
           D+   +  P+ SP G  + F   +DGD   +LY  D  G++   +         P ++ D
Sbjct: 167 DAKAGSFEPSISPDGTQIAFVSSRDGD--PELYLSDAQGQDVRRLTHFHLEDWAPQWSPD 224

Query: 440 PQWVGFM 446
            +++ F+
Sbjct: 225 GRYIAFL 231


>gi|301311762|ref|ZP_07217687.1| tol biopolymer transport system, periplasmic protein [Bacteroides
           sp. 20_3]
 gi|300830322|gb|EFK60967.1| tol biopolymer transport system, periplasmic protein [Bacteroides
           sp. 20_3]
          Length = 304

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 16/207 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S + +++A +    ED              P+ I       L   +S +GK+     ++
Sbjct: 97  ISADGKQIAISNGTKEDGRSRIYTLPFEGGVPRLITPLGPSYLH-GWSPDGKQLAYCAER 155

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   D+Y +       +RLT    ++    YSP    I F S R G  Q++ M+++GS+Q
Sbjct: 156 NGNFDVYVIPALGGEEKRLTTAEGLDDGPEYSPCGQYIWFNSVRTGLMQVWRMKADGSEQ 215

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVMKKDGSQERLLV 387
            +++ D+  + + P  SP G  I F              + +   + +M  +G + + LV
Sbjct: 216 TQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEPGQHLANKNVELRLMPAEGGEPKTLV 275

Query: 388 E----DSNLQAPTWSPSGRSLIFSRKK 410
           +       +   +W+P  +   F   +
Sbjct: 276 KLFGGQGTINVNSWAPDSKRFAFVSYR 302



 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 110/271 (40%), Gaps = 17/271 (6%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I           + + L VMD      R +      ++  P ++P+   + Y +      
Sbjct: 13  IAVFCTHAQKKNVTSVLEVMDIT-TGQRSVVKEFPFLIEAPNWTPDGNWLVYNS-----G 66

Query: 237 LRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSN 292
            ++Y +       P+ I +  +         S++GK+  IS   ++D    IY++  +  
Sbjct: 67  GKLYKLSPESPGEPQLIHSDYATRCNNDHVISADGKQIAISNGTKEDGRSRIYTLPFEGG 126

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               +T  L  +    +SPD  Q+ + ++R G   +YV+ + G ++KR++   E     P
Sbjct: 127 VPRLIT-PLGPSYLHGWSPDGKQLAYCAERNGNFDVYVIPALGGEEKRLTT-AEGLDDGP 184

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKK 410
            +SP G  I F         +  MK DGS++  +   E  N   P  SP G+ ++F    
Sbjct: 185 EYSPCGQYIWFNSVRTGLMQVWRMKADGSEQTQMTFDETRNSWFPHISPDGKQIVFITYT 244

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            GD     +  +   +N  L   PA   +P+
Sbjct: 245 KGDLEPGQHLAN---KNVELRLMPAEGGEPK 272



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 40/135 (29%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  M  DG+    +T    +  + P  SP+ +++ + TY   D+               
Sbjct: 204 QVWRMKADGSEQTQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEP------------- 250

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF----INISA 307
                            G+        ++ +++  +  +    + L         IN++ 
Sbjct: 251 -----------------GQHLA-----NKNVELRLMPAEGGEPKTLVKLFGGQGTINVN- 287

Query: 308 SYSPDSSQIVFESDR 322
           S++PDS +  F S R
Sbjct: 288 SWAPDSKRFAFVSYR 302


>gi|208822605|ref|ZP_03262924.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4042]
 gi|208738090|gb|EDZ85773.1| tol-Pal system beta propeller repeat protein TolB [Escherichia coli
           O157:H7 str. EC4042]
          Length = 169

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 4/172 (2%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + K  ++++Y +DL S    ++T+    N   ++ PDS  + F SD+ G+ Q+Y +  NG
Sbjct: 1   MSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING 60

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              +RI+ +   +  D   S  G  +     +G +  I          ++L      + P
Sbjct: 61  GAPQRITWEGSQNQ-DADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETP 119

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           + +P+G  +I+S  +    GS L  +  +GR +  L  T      P W  ++
Sbjct: 120 SLAPNGTMVIYSSSQG--MGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 169



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 4/170 (2%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                 L +Y+MD    +  +++ + RS    P +  + +    +  +     +Y V++ 
Sbjct: 1   MSKTGSLNLYVMDLASGQ-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 59

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             A +R+T     N  A  S D   +V  S   G++ +          + +S        
Sbjct: 60  GGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF--LDE 117

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
            P  +P G ++ ++   G    + ++  DG  + RL   D  ++ P WSP
Sbjct: 118 TPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSP 167



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 5/171 (2%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     +L VMD     IR +T  R     EP + P+ Q +A+ +       +VY ++  
Sbjct: 2   SKTGSLNLYVMDLASGQIRQVTDGRSN-NTEPTWFPDSQNLAFTSDQAGRP-QVYKVNIN 59

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              AP+RI    S       SS+GK  ++         I   DL +   + L++T F++ 
Sbjct: 60  -GGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSST-FLDE 117

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S +P+ + +++ S +     L ++ ++G  + R+    +     P WSP
Sbjct: 118 TPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARL-PATDGQVKFPAWSP 167


>gi|256838294|ref|ZP_05543804.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739213|gb|EEU52537.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 306

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 16/207 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S + +++A +    ED              P+ I       L   +S +GK+     ++
Sbjct: 99  ISADGKQIAISNGTKEDGRSRIYTLPFEGGVPRLITPLGPSYLH-GWSPDGKQLAYCAER 157

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   D+Y +       +RLT    ++    YSP    I F S R G  Q++ M+++GS+Q
Sbjct: 158 NGNFDVYVIPALGGEEKRLTTAEGLDDGPEYSPCGQYIWFNSVRTGLMQVWRMKADGSEQ 217

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVMKKDGSQERLLV 387
            +++ D+  + + P  SP G  I F              + +   + +M  +G + + LV
Sbjct: 218 TQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEPGQHLANKNVELRLMPAEGGEPKTLV 277

Query: 388 E----DSNLQAPTWSPSGRSLIFSRKK 410
           +       +   +W+P  +   F   +
Sbjct: 278 KLFGGQGTINVNSWAPDSKRFAFVSYR 304



 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 110/271 (40%), Gaps = 17/271 (6%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I           + + L VMD      R +      ++  P ++P+   + Y +      
Sbjct: 15  IAVFCTHAQKKNVTSVLEVMDIT-TGQRSVVKEFPFLIEAPNWTPDGNWLVYNS-----G 68

Query: 237 LRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSN 292
            ++Y +       P+ I +  +         S++GK+  IS   ++D    IY++  +  
Sbjct: 69  GKLYKLSPESPGEPQLINSDYATRCNNDHVISADGKQIAISNGTKEDGRSRIYTLPFEGG 128

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               +T  L  +    +SPD  Q+ + ++R G   +YV+ + G ++KR++   E     P
Sbjct: 129 VPRLIT-PLGPSYLHGWSPDGKQLAYCAERNGNFDVYVIPALGGEEKRLTT-AEGLDDGP 186

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKK 410
            +SP G  I F         +  MK DGS++  +   E  N   P  SP G+ ++F    
Sbjct: 187 EYSPCGQYIWFNSVRTGLMQVWRMKADGSEQTQMTFDETRNSWFPHISPDGKQIVFITYT 246

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            GD     +  +   +N  L   PA   +P+
Sbjct: 247 KGDLEPGQHLAN---KNVELRLMPAEGGEPK 274



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 40/135 (29%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  M  DG+    +T    +  + P  SP+ +++ + TY   D+               
Sbjct: 206 QVWRMKADGSEQTQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEP------------- 252

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF----INISA 307
                            G+        ++ +++  +  +    + L         IN++ 
Sbjct: 253 -----------------GQHLA-----NKNVELRLMPAEGGEPKTLVKLFGGQGTINVN- 289

Query: 308 SYSPDSSQIVFESDR 322
           S++PDS +  F S R
Sbjct: 290 SWAPDSKRFAFVSYR 304


>gi|150009575|ref|YP_001304318.1| Tol biopolymer transport system periplasmic protein
           [Parabacteroides distasonis ATCC 8503]
 gi|298373967|ref|ZP_06983925.1| tol biopolymer transport system, periplasmic protein [Bacteroides
           sp. 3_1_19]
 gi|149937999|gb|ABR44696.1| periplasmic component of the Tol biopolymer transport system
           [Parabacteroides distasonis ATCC 8503]
 gi|298268335|gb|EFI09990.1| tol biopolymer transport system, periplasmic protein [Bacteroides
           sp. 3_1_19]
          Length = 304

 Score =  157 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 16/207 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S + +++A +    ED              P+ I       L   +S +GK+     ++
Sbjct: 97  ISADGKQIAISNGTKEDGRSRIYTLPFEGGVPRLITPLGPSYLH-GWSPDGKQLAYCAER 155

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   D+Y +       +RLT    ++    YSP    I F S R G  Q++ M+++GS+Q
Sbjct: 156 NGNFDVYVIPALGGEEKRLTTAEGLDDGPEYSPCGQYIWFNSVRTGLMQVWRMKADGSEQ 215

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVMKKDGSQERLLV 387
            +++ D+  + + P  SP G  I F              + +   + +M  +G + + LV
Sbjct: 216 TQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEPGQHLANKNVELRLMPAEGGEPKTLV 275

Query: 388 E----DSNLQAPTWSPSGRSLIFSRKK 410
           +       +   +W+P  +   F   +
Sbjct: 276 KLFGGQGTINVNSWAPDSKRFAFVSYR 302



 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 110/271 (40%), Gaps = 17/271 (6%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I           + + L VMD      R +      ++  P ++P+   + Y +      
Sbjct: 13  IAVFCTHAQKKNVTSVLEVMDIT-TGQRSVVKEFPFLIEAPNWTPDGNWLVYNS-----G 66

Query: 237 LRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSN 292
            ++Y +       P+ I +  +         S++GK+  IS   ++D    IY++  +  
Sbjct: 67  GKLYKLSPESPGEPQLINSDYATRCNNDHVISADGKQIAISNGTKEDGRSRIYTLPFEGG 126

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               +T  L  +    +SPD  Q+ + ++R G   +YV+ + G ++KR++   E     P
Sbjct: 127 VPRLIT-PLGPSYLHGWSPDGKQLAYCAERNGNFDVYVIPALGGEEKRLTT-AEGLDDGP 184

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKK 410
            +SP G  I F         +  MK DGS++  +   E  N   P  SP G+ ++F    
Sbjct: 185 EYSPCGQYIWFNSVRTGLMQVWRMKADGSEQTQMTFDETRNSWFPHISPDGKQIVFITYT 244

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            GD     +  +   +N  L   PA   +P+
Sbjct: 245 KGDLEPGQHLAN---KNVELRLMPAEGGEPK 272



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 40/135 (29%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  M  DG+    +T    +  + P  SP+ +++ + TY   D+               
Sbjct: 204 QVWRMKADGSEQTQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEP------------- 250

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF----INISA 307
                            G+        ++ +++  +  +    + L         IN++ 
Sbjct: 251 -----------------GQHLA-----NKNVELRLMPAEGGEPKTLVKLFGGQGTINVN- 287

Query: 308 SYSPDSSQIVFESDR 322
           S++PDS +  F S R
Sbjct: 288 SWAPDSKRFAFVSYR 302


>gi|255558602|ref|XP_002520326.1| conserved hypothetical protein [Ricinus communis]
 gi|223540545|gb|EEF42112.1| conserved hypothetical protein [Ricinus communis]
          Length = 708

 Score =  157 bits (396), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 74/395 (18%), Positives = 144/395 (36%), Gaps = 59/395 (14%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
           +S DS   +   P  +  F    S G +  +     +   D   +E  L+D+    + + 
Sbjct: 294 LSTDSVIIERVTPPGVHAFTPATSPGNKKFIAVATRRPNSDYRHIE--LFDLAK-NEFVE 350

Query: 142 KKFFSSPASWRKIAHTISDDI---YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
                SP +         D     Y    G   D  S   F+ E++ S + + SL  +  
Sbjct: 351 LTRLVSPQTHHYNPFISPDAARVGYHRCRGASNDKKSSTQFMLENIKSPVAEISLFRI-- 408

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG+               P +SP   ++A+  +       VY+++       +    +  
Sbjct: 409 DGS--------------FPSWSPGGDRIAFVEF-----PGVYVVNRDGTDRRQV---YPG 446

Query: 259 MILAPRFSSNGKRALISV------QKDEAMDIYSVDLQS-NATERLTNTLFINISASYSP 311
                 +       + S        +   +DI S+++    + ++LT     N   + SP
Sbjct: 447 NAFGTTWDPVRPGVVYSSAGPEFASESTEVDIISINVDQVGSFKKLTTNGKNNAFPAVSP 506

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGE 369
           D   IVF S R G + LY+M +   ++  + +  E  + D    WS  G+ IAF      
Sbjct: 507 DGKWIVFRSGRSGYKNLYIMDAVEGEKGGLYRLTEGPWGDTMCSWSIDGEWIAFASDREN 566

Query: 370 ----KFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDG---------- 412
                F + ++  +G+  + LV+         P +SP G+S++F+    G          
Sbjct: 567 PGSASFELFLIHPNGTGLKRLVKSGLGGRTNHPYFSPDGKSIVFTTDYGGISAEPISNPH 626

Query: 413 --DTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
                 ++Y++ L+G +   +   ++    P W  
Sbjct: 627 HFQPYGEIYTVKLDGSDLKRLTHNSFEDGTPAWGP 661



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 76/233 (32%), Gaps = 35/233 (15%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRF----SSNGKRALISVQ 277
                Y      D  R     + ++  P+ +I   +   +   F    + NG   +    
Sbjct: 114 GSSTIYLDVLSYDTARSARSRSALETPPRVQIPLLKGNNVGVSFKDKPTINGNYLVYLST 173

Query: 278 KDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQL 328
            ++A         +YS +L +  T RLT     + S + SP        S  +   K ++
Sbjct: 174 HEDAGKPRASWAAVYSTELNTGLTRRLTPYGVADFSPAVSPSGVYTAVASYGEAGWKGEV 233

Query: 329 YVMQSN------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            ++ ++       +  +R+   +   +  P W      + F + S +   I V +     
Sbjct: 234 ELLSTDIYIFLTRNGTRRVKIIENGGW--PSWVDDST-LYFHRSSEKDGWISVYRATLPS 290

Query: 383 ERLLVEDS-----------NLQAPTWSP-SGRSLIFSRKKDGDTGSKLYSIDL 423
              L  DS           +   P  SP + + +  + ++       +   DL
Sbjct: 291 HTSLSTDSVIIERVTPPGVHAFTPATSPGNKKFIAVATRRPNSDYRHIELFDL 343


>gi|227822240|ref|YP_002826211.1| putative TolB-like protein [Sinorhizobium fredii NGR234]
 gi|227341240|gb|ACP25458.1| putative TolB-like protein [Sinorhizobium fredii NGR234]
          Length = 275

 Score =  156 bits (395), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 16/236 (6%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                L  +  DGA    +              SP+   +A +   +     +YL+ +  
Sbjct: 40  NGDGRLYRLGVDGAEPTEIDTGFAGQCNNDHGISPDGNTLAISDKTEFGKSAIYLLPSEG 99

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                  GN  S      +S +G+       +D+  DIY++ +      RLT+    N  
Sbjct: 100 GAPRLVTGNLPSYWHG--WSPDGRMLTYCGIRDQVFDIYTISVDGGEERRLTHGEGRNDG 157

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPD + I F S R G+ Q++ ++ +GSD +RI+      +F P  SP G  +    +
Sbjct: 158 PDWSPDGAWIYFNSSRTGRMQIWRVRPDGSDVQRITDSPYGDWF-PHPSPDGRHLLVLSY 216

Query: 367 SGEKF--------AIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKK 410
            G+ F         + +M  +G   R+L E       +  P WSP+G +  F R  
Sbjct: 217 DGDVFDHPRDLDVRLRLMDPEGGNARVLFELFGGQGTMNVPNWSPNGDAFAFVRYS 272



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 89/253 (35%), Gaps = 20/253 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAP 263
            +    ++++  P +SP+ + +           R+Y +        +    F        
Sbjct: 16  RVVWQTERLVEAPNWSPDGKFLI-----INGDGRLYRLGVDGAEPTEIDTGFAGQCNNDH 70

Query: 264 RFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             S +G    IS + +     IY +  +  A  RL      +    +SPD   + +   R
Sbjct: 71  GISPDGNTLAISDKTEFGKSAIYLLPSEGGAP-RLVTGNLPSYWHGWSPDGRMLTYCGIR 129

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +    +Y +  +G +++R++   E     P WSP G  I F      +  I  ++ DGS 
Sbjct: 130 DQVFDIYTISVDGGEERRLTH-GEGRNDGPDWSPDGAWIYFNSSRTGRMQIWRVRPDGSD 188

Query: 383 ERLLVED-SNLQAPTWSPSGRSLIFSRKKDG------DTGSKLYSIDLNGRNETLI---- 431
            + + +       P  SP GR L+             D   +L  +D  G N  ++    
Sbjct: 189 VQRITDSPYGDWFPHPSPDGRHLLVLSYDGDVFDHPRDLDVRLRLMDPEGGNARVLFELF 248

Query: 432 NTPAYASDPQWVG 444
                 + P W  
Sbjct: 249 GGQGTMNVPNWSP 261



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 15/201 (7%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--I 303
                + +     ++ AP +S +GK  +I    +    +Y + +       +        
Sbjct: 11  TTGEARVVWQTERLVEAPNWSPDGKFLII----NGDGRLYRLGVDGAEPTEIDTGFAGQC 66

Query: 304 NISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           N     SPD + +   SD+   GK  +Y++ S G   + ++       +   WSP G ++
Sbjct: 67  NNDHGISPDGNTLA-ISDKTEFGKSAIYLLPSEGGAPRLVT--GNLPSYWHGWSPDGRML 123

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +     + F I  +  DG +ER L         P WSP G  + F+  + G    +++ 
Sbjct: 124 TYCGIRDQVFDIYTISVDGGEERRLTHGEGRNDGPDWSPDGAWIYFNSSRTGRM--QIWR 181

Query: 421 IDLNGRN-ETLINTPAYASDP 440
           +  +G + + + ++P     P
Sbjct: 182 VRPDGSDVQRITDSPYGDWFP 202



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 83/199 (41%), Gaps = 14/199 (7%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           ++ S  +   K+++ ++  +G   R +T   +   +   +SP+ + + Y    D  +  +
Sbjct: 79  LAISDKTEFGKSAIYLLPSEGGAPRLVT--GNLPSYWHGWSPDGRMLTYCGIRD-QVFDI 135

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y +        +R+ +       P +S +G     +  +   M I+ V    +  +R+T+
Sbjct: 136 YTISVD-GGEERRLTHGEGRNDGPDWSPDGAWIYFNSSRTGRMQIWRVRPDGSDVQRITD 194

Query: 300 TLFINISASYSPDSSQI--------VFESDREGKEQLYVMQSNGSDQKRI--SQDKEASY 349
           + + +     SPD   +        VF+  R+   +L +M   G + + +      + + 
Sbjct: 195 SPYGDWFPHPSPDGRHLLVLSYDGDVFDHPRDLDVRLRLMDPEGGNARVLFELFGGQGTM 254

Query: 350 FDPVWSPQGDLIAFTKFSG 368
             P WSP GD  AF ++S 
Sbjct: 255 NVPNWSPNGDAFAFVRYSP 273



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             D+ +     +  T  +  + ++SPD   ++      G  +LY +  +G++   I    
Sbjct: 7   IFDITTGEARVVWQTERLVEAPNWSPDGKFLI----INGDGRLYRLGVDGAEPTEIDTGF 62

Query: 346 EASYFDPV-WSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                +    SP G+ +A + K    K AI ++  +G   RL+  +       WSP GR 
Sbjct: 63  AGQCNNDHGISPDGNTLAISDKTEFGKSAIYLLPSEGGAPRLVTGNLPSYWHGWSPDGRM 122

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           L +   +  D    +Y+I ++G  E  +         P ++ D  W+ F
Sbjct: 123 LTYCGIR--DQVFDIYTISVDGGEERRLTHGEGRNDGPDWSPDGAWIYF 169


>gi|284035677|ref|YP_003385607.1| amidohydrolase [Spirosoma linguale DSM 74]
 gi|283814970|gb|ADB36808.1| amidohydrolase [Spirosoma linguale DSM 74]
          Length = 1005

 Score =  156 bits (395), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 44/226 (19%), Positives = 92/226 (40%), Gaps = 12/226 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+++++        D+     +        K + +       P +S +G+R       D
Sbjct: 49  SPDKRQIVI------DLQGTIWLLPATGGVAKPLTDPLGDCRQPSWSPDGQRIAFHSFWD 102

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               I++V       ++LTN ++ +    +SPD  Q+VF SDR G   ++ +        
Sbjct: 103 GRYHIWTVSATGGKPQQLTNGIYDDREPHWSPDGKQLVFASDRSGNYDIWQLNLADGKLT 162

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           +++ +   + F+P +SP G  IA+     +   + ++   G+++ +    S L   +W P
Sbjct: 163 QLT-NGSGNEFNPAYSPNGKQIAYISDRTDAPGVYILPLGGTEKLVAPTMSKLAGVSWHP 221

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP---QW 442
            G  L +      +T S L S+ ++     ++        P    W
Sbjct: 222 DGSQLFY--NLLNNTQSGLTSVSVSDGKARMLTEAKEDVFPFRTSW 265



 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 102/251 (40%), Gaps = 10/251 (3%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           ++D I   +T  +G   +  L   +  +   ++ ++ ++   G   + LT        +P
Sbjct: 30  LADSI--RVTVTEGTNMAADLSPDKRQIVIDLQGTIWLLPATGGVAKPLTDPLGD-CRQP 86

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ Q++A+ ++ D          +     P+++ N       P +S +GK+ + +  
Sbjct: 87  SWSPDGQRIAFHSFWDGR--YHIWTVSATGGKPQQLTNGIYDDREPHWSPDGKQLVFASD 144

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +    DI+ ++L      +LTN      + +YSP+  QI + SDR     +Y++   G++
Sbjct: 145 RSGNYDIWQLNLADGKLTQLTNGSGNEFNPAYSPNGKQIAYISDRTDAPGVYILPLGGTE 204

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-- 395
           +  +     +      W P G  + +   +  +  +  +     + R+L E      P  
Sbjct: 205 K--LVAPTMSKLAGVSWHPDGSQLFYNLLNNTQSGLTSVSVSDGKARMLTEAKEDVFPFR 262

Query: 396 -TWSPSGRSLI 405
            +W      L 
Sbjct: 263 TSWFSMDSYLY 273



 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 55/285 (19%), Positives = 104/285 (36%), Gaps = 50/285 (17%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                    D D    + +   +         SP+ +++A+A   D        + T+ +
Sbjct: 302 RNSYKRKTYDFDTQKPQLVKGIKGT-----SISPDGKQIAFAALGD------LWLLTKGN 350

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           + P+R+   ++M + P +S +G +      ++  MD++  DL++     L +        
Sbjct: 351 KVPQRLTQGKAMEVEPGWSPDGSKLTYVSDRNGNMDVWIRDLKTGQDRLLADMSDDLHYP 410

Query: 308 SYSPDSSQIVF-ESDRE---GKEQLYVMQSN-----GSDQKRISQDKEASYFDPVWSPQG 358
           ++SPD S+I F +SD     G+  LYV          + + R   +         WSP G
Sbjct: 411 TWSPDGSKIAFYQSDPRNAWGRSTLYVADVTYTADVTAPKTRKLHESLFVPSQASWSPDG 470

Query: 359 DLIAF-------TKFSGEKFAIGVMKKDGSQERLLV-------EDSNLQAPTWSPSGRSL 404
             +A        +++      + ++  DG  +R +               P WSP G  +
Sbjct: 471 KTLAVSALHPYSSRYREGVSEVLLLSFDGKNDRYVSPAPNHSLATRGQNGPVWSPDGTKM 530

Query: 405 IFSRKKDGDTGSKLYSIDL--NGRNETLINTPA-----YASDPQW 442
            +           L+  D+  +G   T I TP       A  P W
Sbjct: 531 AYV------LDGLLWITDVKPDG---TPIGTPRQLTTEQAETPTW 566



 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 9/151 (5%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           R+T T   N++A  SPD  QIV   D +G   ++++ + G   K ++ D       P WS
Sbjct: 35  RVTVTEGTNMAADLSPDKRQIV--IDLQGT--IWLLPATGGVAKPLT-DPLGDCRQPSWS 89

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDT 414
           P G  IAF  F   ++ I  +   G + + L     + + P WSP G+ L+F+  + G  
Sbjct: 90  PDGQRIAFHSFWDGRYHIWTVSATGGKPQQLTNGIYDDREPHWSPDGKQLVFASDRSG-- 147

Query: 415 GSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
              ++ ++L +G+   L N      +P +  
Sbjct: 148 NYDIWQLNLADGKLTQLTNGSGNEFNPAYSP 178



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 106/258 (41%), Gaps = 34/258 (13%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++ +     + LT  +  +  EP +SP+  K+ Y +  + + + V++ D +  +  +
Sbjct: 342 DLWLLTKGNKVPQRLTQGK-AMEVEPGWSPDGSKLTYVSDRNGN-MDVWIRDLKTGQD-R 398

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMD----------IYSVDLQSNATERLTNTL 301
            + +    +  P +S +G +                       Y+ D+ +  T +L  +L
Sbjct: 399 LLADMSDDLHYPTWSPDGSKIAFYQSDPRNAWGRSTLYVADVTYTADVTAPKTRKLHESL 458

Query: 302 FINISASYSPDSSQIV------FES-DREGKEQLYVMQSNGSDQKRISQDKEASY----- 349
           F+   AS+SPD   +       + S  REG  ++ ++  +G + + +S     S      
Sbjct: 459 FVPSQASWSPDGKTLAVSALHPYSSRYREGVSEVLLLSFDGKNDRYVSPAPNHSLATRGQ 518

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIF 406
             PVWSP G  +A+         I  +K DG      R L  +   + PTW+   +SL+F
Sbjct: 519 NGPVWSPDGTKMAYVL--DGLLWITDVKPDGTPIGTPRQLTTE-QAETPTWTSDSKSLLF 575

Query: 407 SRKKDGDTGSKLYSIDLN 424
                 D   ++Y  D +
Sbjct: 576 LAT---DIFKQVYLADGH 590



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 9/110 (8%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAP 395
           D  R++   E +      SP    I           I ++   G   + L +   + + P
Sbjct: 32  DSIRVT-VTEGTNMAADLSPDKRQIVIDLQG----TIWLLPATGGVAKPLTDPLGDCRQP 86

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQWVG 444
           +WSP G+ + F    DG     ++++   G + + L N      +P W  
Sbjct: 87  SWSPDGQRIAFHSFWDGR--YHIWTVSATGGKPQQLTNGIYDDREPHWSP 134


>gi|313681892|ref|YP_004059630.1| translocation protein tolb [Sulfuricurvum kujiense DSM 16994]
 gi|313154752|gb|ADR33430.1| translocation protein TolB [Sulfuricurvum kujiense DSM 16994]
          Length = 415

 Score =  156 bits (394), Expect = 7e-36,   Method: Composition-based stats.
 Identities = 72/415 (17%), Positives = 172/415 (41%), Gaps = 27/415 (6%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
            +L+ L    F     A ++V       SP++I  +   + D L  K +++++ D+    
Sbjct: 3   IILIFLTLVQFSWGADATLEVVKGVGGLSPLAIEDSSLQTSD-LSRKFTQMLAADMNVVS 61

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F  + Q        +    P+ QD     AQ L+  R++ +G   +R + ++  +++  
Sbjct: 62  LFT-VDQSYASVPFNSLSPSPQHQD-----AQYLIRYRLVDDGAGGMRADVKM--LQNGN 113

Query: 138 QIIGKKFFSSPASWR-KIAHTISDDIYQSITGEKGDFNSR-ILFVSESVVSGIIKNSLCV 195
           +   K +    +     ++H I+ DI   + G   D+  R ++FV  +      ++ + V
Sbjct: 114 EFFAKSYILKQSEMAVFLSHAIAYDINAKLGGSPIDWIKRKVVFVRLTSPK---RSEIVV 170

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D   +  + +      +    +++ ++Q   Y T   +    +Y +  +  +  K + +
Sbjct: 171 SDYTLSYQKVVMSG--GMYGFAKWANSEQSEVYYTSLLDFKPTIYKLSLQSGKKDKIVSS 228

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
              M +    S + KR L+++  +   DIY  DL S A  ++TN   I+++  +  D S 
Sbjct: 229 -DGMAVCSDVSEDSKRLLLTLAPNGQPDIYLFDLTSGAKTQITNYSGIDVNGQFMGDGS- 286

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------TKFSGE 369
           I F S+R G   ++  + N +   ++    + +      S   + + +        F+G 
Sbjct: 287 IAFVSNRLGYPNIFSTRMNSTAVSQLVYHGKNN---SSLSSYKNFLVYKARENSATFAGN 343

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            F + ++  +    + L        P +S  G ++++ +++   +   +    +N
Sbjct: 344 SFNLHLLSLNSGNVQRLTASGENDFPKFSYDGEAILYIKQEGARSSVGVIRFGVN 398


>gi|91772443|ref|YP_565135.1| WD40-like beta propeller protein [Methanococcoides burtonii DSM
           6242]
 gi|91711458|gb|ABE51385.1| protein with TolB-like beta propeller domains [Methanococcoides
           burtonii DSM 6242]
          Length = 354

 Score =  156 bits (394), Expect = 8e-36,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 111/255 (43%), Gaps = 11/255 (4%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--YDDEDILRVYLMDTR 245
             + ++  M+ DG N   +  S      EP F+ +  ++ +A+   +      + +    
Sbjct: 61  SSEQTIWTMNSDGTNKNEIYDS-IVWDGEPVFNTDGDRLYFASEHVNPYSAKFISIHVVD 119

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           ID   +      + + AP  S +G +     +     +I+ +D+  +   ++T++     
Sbjct: 120 IDGLNRTQITKNADMRAPAVSPDGTQLAYLSKLSGNYEIWVMDIDGSNQTQITDSDIDEG 179

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++SPD   I++  +      ++ +   G     I ++   + ++PV++P+G  +A+  
Sbjct: 180 VPAWSPDGKHIIYSLE----GNIWKVNI-GPKVPSILKENYYTSYNPVFNPEGTKVAYVL 234

Query: 366 FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +     I +M  DG   + L   D +   P WSP G+S+ +S  K G+    ++ ++L+
Sbjct: 235 ETNGVKDIWIMNADGKGTKQLTFSDQDEIDPAWSPDGKSIAYSSNKAGEF--NIWKMELS 292

Query: 425 GRNETLINTPAYASD 439
               T+ + P Y  +
Sbjct: 293 MTEATIPHDPEYKDE 307



 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/235 (22%), Positives = 110/235 (46%), Gaps = 14/235 (5%)

Query: 160 DDIYQSIT-GEKGDFNS---RILFVSESVVSGIIK-NSLCVMDRDGANIRYLTPSRDQIL 214
           ++IY SI    +  FN+   R+ F SE V     K  S+ V+D DG N   +T + D  +
Sbjct: 77  NEIYDSIVWDGEPVFNTDGDRLYFASEHVNPYSAKFISIHVVDIDGLNRTQITKNAD--M 134

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P  SP+  ++AY +    +   +++MD        +I +       P +S +GK  + 
Sbjct: 135 RAPAVSPDGTQLAYLSKLSGN-YEIWVMDID-GSNQTQITDSDIDEGVPAWSPDGKHIIY 192

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S++ +    I+ V++       L    + + +  ++P+ +++ +  +  G + +++M ++
Sbjct: 193 SLEGN----IWKVNIGPKVPSILKENYYTSYNPVFNPEGTKVAYVLETNGVKDIWIMNAD 248

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           G   K+++   +    DP WSP G  IA++     +F I  M+   ++  +  + 
Sbjct: 249 GKGTKQLTF-SDQDEIDPAWSPDGKSIAYSSNKAGEFNIWKMELSMTEATIPHDP 302



 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 87/231 (37%), Gaps = 51/231 (22%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +AP +S +  R + S ++     I++++        + +++  +    ++ D  ++ F
Sbjct: 45  NQVAPAWSPDSDRIVYSSEQ----TIWTMNSDGTNKNEIYDSIVWDGEPVFNTDGDRLYF 100

Query: 319 ESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            S+           ++V+  +G ++ +I+  K A    P  SP G  +A+       + I
Sbjct: 101 ASEHVNPYSAKFISIHVVDIDGLNRTQIT--KNADMRAPAVSPDGTQLAYLSKLSGNYEI 158

Query: 374 GVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD--------------------- 411
            VM  DGS +  + + D +   P WSP G+ +I+S + +                     
Sbjct: 159 WVMDIDGSNQTQITDSDIDEGVPAWSPDGKHIIYSLEGNIWKVNIGPKVPSILKENYYTS 218

Query: 412 -----------------GDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
                             +    ++ ++ +G+  + L  +     DP W  
Sbjct: 219 YNPVFNPEGTKVAYVLETNGVKDIWIMNADGKGTKQLTFSDQDEIDPAWSP 269



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 7/61 (11%)

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASD 439
           +    L E  N  AP WSP    +++S ++       +++++ +G N+  I     +  +
Sbjct: 35  TDHYQLTEGINQVAPAWSPDSDRIVYSSEQT------IWTMNSDGTNKNEIYDSIVWDGE 88

Query: 440 P 440
           P
Sbjct: 89  P 89


>gi|262383138|ref|ZP_06076275.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262296016|gb|EEY83947.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 304

 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 16/207 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S + +++A +    ED              P+ I       L   +S +GK+     ++
Sbjct: 97  ISADGKQIAISNGTKEDGKSRVYTLPFEGGVPRLITPLGPSYLH-GWSPDGKQLAYCAER 155

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   D+Y +       +RLT    ++    YSP    I F S R G  Q++ M+++GS+Q
Sbjct: 156 NGNFDVYVIPSLGGEEKRLTTAEGLDDGPEYSPCGQYIWFNSVRTGLMQVWRMKADGSEQ 215

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVMKKDGSQERLLV 387
            +++ D+  + + P  SP G  I F              + +   + +M  +G + + LV
Sbjct: 216 TQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEPGQHLANKNVELRLMPAEGGEPKTLV 275

Query: 388 E----DSNLQAPTWSPSGRSLIFSRKK 410
           +       +   +W+P  +   F   +
Sbjct: 276 KLFGGQGTINVNSWAPDSKRFAFVSYR 302



 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 59/271 (21%), Positives = 110/271 (40%), Gaps = 17/271 (6%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I           + + L VMD      R +      ++  P ++P+   + Y +      
Sbjct: 13  IAVFCTHAQKKNVTSVLEVMDIT-TGQRSVVKEFPFLIEAPNWTPDGNWLVYNS-----G 66

Query: 237 LRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSN 292
            ++Y +       P+ I +  +         S++GK+  IS   ++D    +Y++  +  
Sbjct: 67  GKLYKLSPESPGEPQLINSDYATRCNNDHVISADGKQIAISNGTKEDGKSRVYTLPFEGG 126

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               +T  L  +    +SPD  Q+ + ++R G   +YV+ S G ++KR++   E     P
Sbjct: 127 VPRLIT-PLGPSYLHGWSPDGKQLAYCAERNGNFDVYVIPSLGGEEKRLTT-AEGLDDGP 184

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKK 410
            +SP G  I F         +  MK DGS++  +   E  N   P  SP G+ ++F    
Sbjct: 185 EYSPCGQYIWFNSVRTGLMQVWRMKADGSEQTQMTFDETRNSWFPHISPDGKQIVFITYT 244

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            GD     +  +   +N  L   PA   +P+
Sbjct: 245 KGDLEPGQHLAN---KNVELRLMPAEGGEPK 272



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 40/135 (29%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  M  DG+    +T    +  + P  SP+ +++ + TY   D+               
Sbjct: 204 QVWRMKADGSEQTQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEP------------- 250

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF----INISA 307
                            G+        ++ +++  +  +    + L         IN++ 
Sbjct: 251 -----------------GQHLA-----NKNVELRLMPAEGGEPKTLVKLFGGQGTINVN- 287

Query: 308 SYSPDSSQIVFESDR 322
           S++PDS +  F S R
Sbjct: 288 SWAPDSKRFAFVSYR 302


>gi|152990959|ref|YP_001356681.1| translocation protein TolB [Nitratiruptor sp. SB155-2]
 gi|151422820|dbj|BAF70324.1| Tol biopolymer transport system component TolB [Nitratiruptor sp.
           SB155-2]
          Length = 407

 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 62/395 (15%), Positives = 146/395 (36%), Gaps = 36/395 (9%)

Query: 22  VLIGGFFPTSIHAF-VKVATNSANYSPVSIAFTKFVSIDE--LGGKVSEVVSKDLQRSDV 78
           ++       +++A  + +       +   I      S     L  K  ++++ DL+ +  
Sbjct: 4   LIFFVLLSLTLYAQDMTLEIVKDVGNRPKIVVEDHSSNINYMLRKKFLKLINADLEVTSH 63

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F+++          +   +             L+   ++ +    L  E    D+  +  
Sbjct: 64  FDVL---------KDESGVHNEG--------YLLKYELMYDDYGHLCAEILFADLVQKVI 106

Query: 139 IIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           ++ K++  S    +  +AH I  DI   +      F     FV  S   G  +  + + D
Sbjct: 107 LLKKRYKISDNDRYPFLAHRIVYDINAKLHLPDVSFLKS--FVVFSKYVGPRRADIVISD 164

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
                 + +      +   P+++ ++ + A+     + +  +Y +D       K I +  
Sbjct: 165 YTLTYQKTVVHG--GLNIFPKWA-DRTQRAFYYTSMQKVPTLYKVDIYKGTRTKIIQS-E 220

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            M++    S +GK+ L+++  +   DIY +DL      RLT    I+++ +Y  D  +IV
Sbjct: 221 GMLVCSDVSKDGKKLLLTMAPNYQPDIYELDLTKKTLRRLTTYPGIDVNGNYVEDGRRIV 280

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------F 371
           F SDR G   ++  +      +R+    + +     +    D + ++    +       F
Sbjct: 281 FVSDRLGNPTIFAKRIGSKAVERVVYHGKNNSACTTY---KDYVVYSSRETDNAFGSNTF 337

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            + +        R L  +     P ++  G +++F
Sbjct: 338 NLYLTSTTSDYIRRLTANGVNIFPRFAADGETILF 372



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 37/122 (30%), Gaps = 12/122 (9%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              +NI   ++  + +  + +  +    LY +      + +I Q  E        S  G 
Sbjct: 175 HGGLNIFPKWADRTQRAFYYTSMQKVPTLYKVDIYKGTRTKIIQ-SEGMLVCSDVSKDGK 233

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKDGD 413
            +  T     +  I  +       R L        + N         GR ++F   + G+
Sbjct: 234 KLLLTMAPNYQPDIYELDLTKKTLRRLTTYPGIDVNGNYVE-----DGRRIVFVSDRLGN 288

Query: 414 TG 415
             
Sbjct: 289 PT 290


>gi|332883941|gb|EGK04221.1| hypothetical protein HMPREF9456_01249 [Dysgonomonas mossii DSM
           22836]
          Length = 292

 Score =  155 bits (393), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 16/206 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +++A +            +       P+++       L   +S +GK       ++
Sbjct: 82  SPDGKRLAVSHRSLPQGRPTVFILPAEGGTPRQVTPSAPSYLH-GWSPDGKSLTYCANRE 140

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             MD+Y++++      RLT +  +N    Y+P    I F S R G  QL+ M+++GS+Q 
Sbjct: 141 GEMDVYTININGTNETRLTFSEGLNDGPEYTPKGKYIWFNSVRTGLMQLWRMKTDGSEQT 200

Query: 340 RISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVMKKDGSQERLLVE 388
           +++ D++ + + P  SP G  + +                +   I +M   G + + L++
Sbjct: 201 QMTFDEDRNSWFPHISPDGKHVVYIAYKKGDLEPHEHLRYKNVEIRIMSATGGKPQTLIK 260

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKK 410
                      +WSP  +   + R K
Sbjct: 261 LFGGQGTFNVNSWSPDSKCFAYVRYK 286



 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 99/262 (37%), Gaps = 25/262 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM- 259
            N   L      ++  P ++ + + + Y +        +Y + T           F +  
Sbjct: 21  TNKSILIKEFPYLIEAPDWTSDGKWLIYNSEGL-----IYKLSTSGGEPQLIDTGFANQC 75

Query: 260 ILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                 S +GKR  +S +        ++ +  +     ++T     +    +SPD   + 
Sbjct: 76  NNDHLVSPDGKRLAVSHRSLPQGRPTVFILPAEGGTPRQVT-PSAPSYLHGWSPDGKSLT 134

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           + ++REG+  +Y +  NG+++ R++   E     P ++P+G  I F         +  MK
Sbjct: 135 YCANREGEMDVYTININGTNETRLTF-SEGLNDGPEYTPKGKYIWFNSVRTGLMQLWRMK 193

Query: 378 KDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGD---------TGSKLYSIDLN-G 425
            DGS++  +   ED N   P  SP G+ +++   K GD            ++  +    G
Sbjct: 194 TDGSEQTQMTFDEDRNSWFPHISPDGKHVVYIAYKKGDLEPHEHLRYKNVEIRIMSATGG 253

Query: 426 RNETLINTPAYASD---PQWVG 444
           + +TLI             W  
Sbjct: 254 KPQTLIKLFGGQGTFNVNSWSP 275



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 33/101 (32%), Gaps = 12/101 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI----------LRVYL 241
            L  M  DG+    +T   D+  + P  SP+ + V Y  Y   D+          + + +
Sbjct: 188 QLWRMKTDGSEQTQMTFDEDRNSWFPHISPDGKHVVYIAYKKGDLEPHEHLRYKNVEIRI 247

Query: 242 MDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDE 280
           M     +    I  F          +S + K       K E
Sbjct: 248 MSATGGKPQTLIKLFGGQGTFNVNSWSPDSKCFAYVRYKTE 288


>gi|94970511|ref|YP_592559.1| WD-40-like beta propeller repeat-containing protein [Candidatus
           Koribacter versatilis Ellin345]
 gi|94552561|gb|ABF42485.1| WD40-like beta Propeller [Candidatus Koribacter versatilis
           Ellin345]
          Length = 367

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/319 (17%), Positives = 124/319 (38%), Gaps = 42/319 (13%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHT----ISDDIYQSITGEKGDFNSRILFVSESVVS-- 186
               +    + +FS+   +    H       D IY          ++ +L +S +     
Sbjct: 47  TFGGQN--AEAYFSADDKYLIFQHQGDGVPCDQIYTMEVDPVKANHATLLDLSLAPPKLV 104

Query: 187 --GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G  + +       G  I + +         P+  P+  K     +   D  ++Y    
Sbjct: 105 STGKGRTTCSYWFPSGERILFSSTHAANAECPPK--PDYSK--GYVWPIYDTYQIYTAKA 160

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 K++ + +        + +GK  + +  ++  +DIY++D   +  ++LT+ L  +
Sbjct: 161 D-GSDLKQLTHEKGYNAEATITRDGKHIVFTSTRNGDLDIYTMDADGSHVKQLTHELGYD 219

Query: 305 ISASYSPDSSQIVFESD--------------------REGKEQLYVMQSNGSDQKRISQD 344
               +S D  +IV+ +                     R G  +L+VM ++GS++ +++++
Sbjct: 220 GGPFWSYDGKKIVYRAQHPKNAEEEKDYRDLLGKGLIRPGNLELWVMNADGSNKHQVTRN 279

Query: 345 KEASYFDPVWSPQGDLIAFTKF-----SGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWS 398
             A+ F P W P G  I F        +G  F + ++ +DG  QER+         P ++
Sbjct: 280 GAAN-FAPYWLPDGKRIIFASNQADPKNGRDFDLYIINEDGTGQERITFHPDFDGFPMFT 338

Query: 399 PSGRSLIFSRKKDGDTGSK 417
             G+ L+++  ++G    +
Sbjct: 339 SDGKRLVWASNRNGKAPHE 357



 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 57/297 (19%), Positives = 100/297 (33%), Gaps = 61/297 (20%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDR------------ 248
           N+R LT           FS + + + +    D     ++Y M+    +            
Sbjct: 42  NVRQLTFGGQNAEAY--FSADDKYLIFQHQGDGVPCDQIYTMEVDPVKANHATLLDLSLA 99

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQK--------------------DEAMDIYSVD 288
            PK +   +       +  +G+R L S                        +   IY+  
Sbjct: 100 PPKLVSTGKGRTTCSYWFPSGERILFSSTHAANAECPPKPDYSKGYVWPIYDTYQIYTAK 159

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
              +  ++LT+    N  A+ + D   IVF S R G   +Y M ++GS  K+++ +    
Sbjct: 160 ADGSDLKQLTHEKGYNAEATITRDGKHIVFTSTRNGDLDIYTMDADGSHVKQLTHEL-GY 218

Query: 349 YFDPVWSPQGDLIAFTKF--------------------SGEKFAIGVMKKDGSQERLLVE 388
              P WS  G  I +                             + VM  DGS +  +  
Sbjct: 219 DGGPFWSYDGKKIVYRAQHPKNAEEEKDYRDLLGKGLIRPGNLELWVMNADGSNKHQVTR 278

Query: 389 DSNLQ-APTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLIN-TPAYASDP 440
           +     AP W P G+ +IF+  +      +   LY I+ +G  +  I   P +   P
Sbjct: 279 NGAANFAPYWLPDGKRIIFASNQADPKNGRDFDLYIINEDGTGQERITFHPDFDGFP 335



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 88/272 (32%), Gaps = 56/272 (20%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM--DIY 285
           ++    +D  +   +         R   F        FS++ K  +   Q D      IY
Sbjct: 20  FSLVRAQDAAKPLTLPEEKHLKNVRQLTFGGQNAEAYFSADDKYLIFQHQGDGVPCDQIY 79

Query: 286 SV-------------DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK------- 325
           ++             DL     + ++        + + P   +I+F S            
Sbjct: 80  TMEVDPVKANHATLLDLSLAPPKLVSTGKGRTTCSYWFPSGERILFSSTHAANAECPPKP 139

Query: 326 -------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                         Q+Y  +++GSD K+++ +K  +  +   +  G  I FT        
Sbjct: 140 DYSKGYVWPIYDTYQIYTAKADGSDLKQLTHEKGYNA-EATITRDGKHIVFTSTRNGDLD 198

Query: 373 IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGD------------------ 413
           I  M  DGS  + L  +      P WS  G+ +++  +   +                  
Sbjct: 199 IYTMDADGSHVKQLTHELGYDGGPFWSYDGKKIVYRAQHPKNAEEEKDYRDLLGKGLIRP 258

Query: 414 TGSKLYSIDLNGRNETLINTPAYASD-PQWVG 444
              +L+ ++ +G N+  +     A+  P W+ 
Sbjct: 259 GNLELWVMNADGSNKHQVTRNGAANFAPYWLP 290


>gi|78777595|ref|YP_393910.1| translocation protein TolB [Sulfurimonas denitrificans DSM 1251]
 gi|78498135|gb|ABB44675.1| putative tonB-independent protein-uptake protein [Sulfurimonas
           denitrificans DSM 1251]
          Length = 417

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 71/417 (17%), Positives = 165/417 (39%), Gaps = 26/417 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           MKI + +L V++  F      A + V   +     +++             K  + V  D
Sbjct: 1   MKIIVSILFVIVSMFAN---DATIDVVKKADTLPSIALEDASVSYDSTFKAKFFKTVVAD 57

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L    +FN+       Q+  N D+     +  +     ++  ++ ++    L V+ +L++
Sbjct: 58  LNVLSIFNV----DKVQRDVNFDASSVLVE--NKNMNYVLRYKLSQDDNSALNVDIKLFN 111

Query: 133 VKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
            K+   +  K +  + +  +  +AHTI+ DI   +     ++  R +  S  +     ++
Sbjct: 112 -KEGSIVFNKNYKVNSSDIYMFVAHTIAYDINSFMGESPIEWIKRKVIFSRMLSP--QRS 168

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V D        +          P+++  +Q   Y T  +E    +  +D +  +  K
Sbjct: 169 ELVVTDYTLTYQHVIVKG--GFNLFPKWANKEQSAFYYTSLNETKPTLKYLDLKTGK-SK 225

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            I +   M++    + +G + L ++  +   DI+  D+++  T++LTN   I++   +  
Sbjct: 226 VIKSSDGMMICSDINEDGSKLLFTMAPNGQPDIFLYDIKTQNTKKLTNYGGIDVGGQFMG 285

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------K 365
           D   ++F SDR G   ++ +       ++I    +++      S  G  + +        
Sbjct: 286 D-DSVIFVSDRLGYPNVFSLNIKSGSVEQIVYYGKSNSAC---SVHGKYVVYKARESSDS 341

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           FS   F + ++  +    R L      + P +S  G ++IF +     +   +  ++
Sbjct: 342 FSNNTFNLHLVSMESDFVRRLTAVGVNEFPKFSVDGDAVIFVKNYQSQSSVGIIRLN 398


>gi|268679161|ref|YP_003303592.1| TolB domain protein [Sulfurospirillum deleyianum DSM 6946]
 gi|268617192|gb|ACZ11557.1| TolB domain protein [Sulfurospirillum deleyianum DSM 6946]
          Length = 422

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 65/421 (15%), Positives = 160/421 (38%), Gaps = 26/421 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSID-ELGGKVSEVVSK 71
           +K  +CL++      F  +  A V++         +++      ++D  L  K  +++  
Sbjct: 2   IKKMICLMVF---ALFSYAADATVEIVKKIDVLPKIAVQDASAKNVDMALRQKFFKLLVG 58

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+ S  F ++ +  + Q          F   +      ++   +     + +    +  
Sbjct: 59  DLRVSSHFQVVDE--YLQSSYEGGPFENF--LSEKKVDSILRFSINSN-INTMSANVKFI 113

Query: 132 DVKDRKQIIGKKFFSSPASWR-KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           + K       K +  +       +AH I  D+   I      +  + +  ++   +G  K
Sbjct: 114 NAKTGATTFEKAYSLNDLKRHPFLAHKIIIDVNDQIGAPSIKWMEQSVIFAKY--TGTKK 171

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           + + V D   +  + +      +   P+++ +QQ   Y T  +     +Y  D R   A 
Sbjct: 172 SEIVVSDYTLSYQKVMVAG--GLNIFPKWANDQQNAFYYTSYNGAEPTIYHYDLRTG-AR 228

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           K I +   MI+    S +G + L+++   +  DIY  D++S    ++T    I+++ ++ 
Sbjct: 229 KSIISSNGMIVCSDVSKDGSKLLLTMAPKDQPDIYLYDVKSRKITKITEYAGIDVNGNFI 288

Query: 311 PDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +  +I F SDR G   ++     + S +K +   K  +      S   + I ++    +
Sbjct: 289 DNDRRIAFVSDRLGNPDIFAQGIYDKSFEKLVYHGKNKN----SISTYDNYIVYSSREAD 344

Query: 370 K------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  F + ++  +    R L        P ++    ++++ ++    +   +  ++ 
Sbjct: 345 NAFGRNTFNLYLISTNTDYLRQLTAAGENLYPRFANDPDTIMYIKQFGNQSALGIIRLNA 404

Query: 424 N 424
           N
Sbjct: 405 N 405


>gi|157164610|ref|YP_001466350.1| translocation protein TolB [Campylobacter concisus 13826]
 gi|112800116|gb|EAT97460.1| protein TolB [Campylobacter concisus 13826]
          Length = 418

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 68/413 (16%), Positives = 159/413 (38%), Gaps = 22/413 (5%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF---VSIDELGGKVSEVVSKDLQR 75
           + L L       +  A + V  N     P  IA       VS      K  +++  DL+ 
Sbjct: 4   IFLFLCVALGLYAADATISV-INQGVALP-KIALQDATTAVSDAGFRDKFFKIMLGDLKV 61

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S  F +I +D          +     D    G +++    +       L +  +L D K 
Sbjct: 62  SSDFEVI-EDHVPSTYEGTAATNTMSD---KGVELIFRYALEGSMGSPLTLRVKLIDAKT 117

Query: 136 RKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
                 + +     A +  +AH    ++   +      +  + + +++       ++S+ 
Sbjct: 118 ATTRYERVYNMPDGAKYPFLAHKSIVELTNELNLPPVGWMEKFIILAKYTS--ARQSSII 175

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFS-PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           V D      + +      +   P+++  +Q K  Y +Y +     ++  D       K I
Sbjct: 176 VADYTLTYQKTIVSG--GLNIFPKWAGADQSKFYYTSYVNNKP-TLFRYDLNSGTKTKII 232

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +   M++A   S +G + L+++   +  DI+  +  S    ++TN   I+++ ++  + 
Sbjct: 233 DSV-GMLIASDVSKDGSKILLTMAPKDQPDIFIYNTGSKNLTQITNYPGIDVNGNFVDND 291

Query: 314 SQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKF 371
           S+IVF SDR G   ++   + +G   +++    + +     +    + + ++   +   F
Sbjct: 292 SRIVFVSDRLGYPNIFATPATSGGSVEQMVFHGKNNNSVSTF---ENYVVYSSREASGGF 348

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            I ++       R L  +     P +S  G+S++F ++  G +   +  ++ N
Sbjct: 349 NIYLISTQTDFIRQLTANGKNNYPRFSSDGQSVVFIKELGGQSSLGVVRLNEN 401


>gi|148977418|ref|ZP_01814018.1| translocation protein TolB precursor [Vibrionales bacterium SWAT-3]
 gi|145963370|gb|EDK28635.1| translocation protein TolB precursor [Vibrionales bacterium SWAT-3]
          Length = 161

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 71/164 (43%), Gaps = 4/164 (2%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +Y++DL +    ++T     N    + PD   ++F SDR GK Q+Y +  + +   RI+ 
Sbjct: 1   MYTLDLATRKLTQITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYNVNLSNNSTSRITW 60

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
               +      +P G  +     S   F +     +    ++L +    ++P+ +P+G  
Sbjct: 61  QGSQNLGGQ-ITPDGRFLIMVNRSNSGFNLAKQDLETGAVQVLTKTLLDESPSIAPNGGM 119

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           +I+S   +    + L  + ++GR +  L  T      P W  F+
Sbjct: 120 VIYSSIYN--KTNVLSMVSIDGRFKARLPATNGRVRAPAWSPFL 161



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 64/154 (41%), Gaps = 3/154 (1%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R   +I   RS    P +  +GK  + +  +     IY+V+L +N+T R+T     N+ 
Sbjct: 8   TRKLTQITRGRSNNTEPFWHPDGKSLIFTSDRGGKPQIYNVNLSNNSTSRITWQGSQNLG 67

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              +PD   ++  +       L          + +++        P  +P G ++ ++  
Sbjct: 68  GQITPDGRFLIMVNRSNSGFNLAKQDLETGAVQVLTKTL--LDESPSIAPNGGMVIYSSI 125

Query: 367 SGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
             +   + ++  DG  + RL   +  ++AP WSP
Sbjct: 126 YNKTNVLSMVSIDGRFKARLPATNGRVRAPAWSP 159



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 72/164 (43%), Gaps = 5/164 (3%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  +D     +  +T  R     EP + P+ + + + + D     ++Y ++   + +  R
Sbjct: 1   MYTLDLATRKLTQITRGRSN-NTEPFWHPDGKSLIFTS-DRGGKPQIYNVNL-SNNSTSR 57

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I    S  L  + + +G+  ++  + +   ++   DL++ A + LT TL ++ S S +P+
Sbjct: 58  ITWQGSQNLGGQITPDGRFLIMVNRSNSGFNLAKQDLETGAVQVLTKTL-LDESPSIAPN 116

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
              +++ S       L ++  +G  + R+          P WSP
Sbjct: 117 GGMVIYSSIYNKTNVLSMVSIDGRFKARL-PATNGRVRAPAWSP 159


>gi|251795982|ref|YP_003010713.1| periplasmic component of the Tol biopolymer transport system
           [Paenibacillus sp. JDR-2]
 gi|247543608|gb|ACT00627.1| periplasmic component of the Tol biopolymer transport system
           [Paenibacillus sp. JDR-2]
          Length = 285

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 50/206 (24%), Positives = 88/206 (42%), Gaps = 17/206 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  ++A + +  ED              P  +       L   +S +G+      ++ 
Sbjct: 79  SPDNIRLAVSHHTREDGQSRIYTFPLEGGDPVLVTPMGPSYLH-GWSPDGRTLAYCAERK 137

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              DIY++        +LTNT  ++    YSPD   I F S R G  Q++ M+++GS+Q 
Sbjct: 138 GQYDIYTIPAIGGEETQLTNTPGLDDGPEYSPDGGYIWFNSVRTGLMQVWRMKADGSEQT 197

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK-----------FAIGVMKKDGSQERLLVE 388
           +++ D+  S+F P  SP G L+A+  +                 + +M  +G + R LV+
Sbjct: 198 QMTFDESNSWF-PHVSPDGKLVAYITYRKGDVAPGDHPANKHVELRLMDSNGGEYRTLVQ 256

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKK 410
                  +   +WSP  R L F   +
Sbjct: 257 LFGGQGTINVNSWSPDSRKLAFVSYR 282



 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 100/259 (38%), Gaps = 24/259 (9%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-IL 261
            R +  + D ++  P ++ + + + Y +       R+Y        + +   +F      
Sbjct: 20  ERSVLATFDYLIEAPNWTSDGKTLIYNSKG-----RIYSFHIEEGSSTEIPSSFAVHCNN 74

Query: 262 APRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
               S +  R  +S   ++D    IY+  L+      +T  +  +    +SPD   + + 
Sbjct: 75  DHVLSPDNIRLAVSHHTREDGQSRIYTFPLEGGDPVLVT-PMGPSYLHGWSPDGRTLAYC 133

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           ++R+G+  +Y + + G ++ +++ +       P +SP G  I F         +  MK D
Sbjct: 134 AERKGQYDIYTIPAIGGEETQLT-NTPGLDDGPEYSPDGGYIWFNSVRTGLMQVWRMKAD 192

Query: 380 GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGS---------KLYSIDLNGRNET 429
           GS++  +  ++SN   P  SP G+ + +   + GD            +L  +D NG    
Sbjct: 193 GSEQTQMTFDESNSWFPHVSPDGKLVAYITYRKGDVAPGDHPANKHVELRLMDSNGGEYR 252

Query: 430 ----LINTPAYASDPQWVG 444
               L       +   W  
Sbjct: 253 TLVQLFGGQGTINVNSWSP 271



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 78/191 (40%), Gaps = 13/191 (6%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI--N 304
                 +  F  +I AP ++S+GK  +     +    IYS  ++  ++  + ++  +  N
Sbjct: 18  TGERSVLATFDYLIEAPNWTSDGKTLIY----NSKGRIYSFHIEEGSSTEIPSSFAVHCN 73

Query: 305 ISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                SPD+ ++     +  +G+ ++Y     G D   ++    +      WSP G  +A
Sbjct: 74  NDHVLSPDNIRLAVSHHTREDGQSRIYTFPLEGGDPVLVTPMGPSYLHG--WSPDGRTLA 131

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +      ++ I  +   G +E  L         P +SP G  + F+  + G    +++ +
Sbjct: 132 YCAERKGQYDIYTIPAIGGEETQLTNTPGLDDGPEYSPDGGYIWFNSVRTGLM--QVWRM 189

Query: 422 DLNGRNETLIN 432
             +G  +T + 
Sbjct: 190 KADGSEQTQMT 200


>gi|171057547|ref|YP_001789896.1| periplasmic component of the Tol biopolymer transport system
           [Leptothrix cholodnii SP-6]
 gi|170774992|gb|ACB33131.1| periplasmic component of the Tol biopolymer transport system
           [Leptothrix cholodnii SP-6]
          Length = 296

 Score =  154 bits (389), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 88/206 (42%), Gaps = 17/206 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  ++A + +  ED+     +       P R+ +         +S +G+R     ++D
Sbjct: 91  SPDGARLAISHFAHEDVSSRIYIVPLGGGVPVRVTDL-GPNYLHGWSPDGQRLAYCAERD 149

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              D+Y++ +      RLT+T  ++    YSPD   I F S R G  Q++ M  +G +Q 
Sbjct: 150 GQYDVYTIPVHGGPETRLTDTPGLDDGPEYSPDGRHIWFNSTRSGLMQVWRMDIHGRNQT 209

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK-----------FAIGVMKKDGSQERLLVE 388
            + +D +A+ + P  SP G  + +  +  +              I ++  +G + R + +
Sbjct: 210 HVIKD-DANCWFPHVSPDGQRVVYVAYDKDNVAPGDHPPDKPVEIRLVSAEGGKPRTIAQ 268

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKK 410
                  L   +W+P  R + F   +
Sbjct: 269 LFGGQGTLNVNSWAPDNRHIAFVSYR 294



 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 81/188 (43%), Gaps = 13/188 (6%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             A   +  F  +I AP ++ +G+R +     +    +++ +L S    R+     ++ +
Sbjct: 30  TGARTVLKEFDVVIEAPNWTRDGRRLIF----NSLGGMFAYELSSGEVTRIDTGFAVDCN 85

Query: 307 --ASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                SPD +++     +  +   ++Y++   G    R++           WSP G  +A
Sbjct: 86  NDHVLSPDGARLAISHFAHEDVSSRIYIVPLGGGVPVRVTDLGPNYLHG--WSPDGQRLA 143

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +      ++ +  +   G  E  L +       P +SP GR + F+  + G    +++ +
Sbjct: 144 YCAERDGQYDVYTIPVHGGPETRLTDTPGLDDGPEYSPDGRHIWFNSTRSGLM--QVWRM 201

Query: 422 DLNGRNET 429
           D++GRN+T
Sbjct: 202 DIHGRNQT 209



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 67/192 (34%), Gaps = 17/192 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            + + ++   G     +T      L    +SP+ Q++AY    D     VY +       
Sbjct: 108 SSRIYIVPLGGGVPVRVTDLGPNYLHG--WSPDGQRLAYCAERDGQ-YDVYTIPVH-GGP 163

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             R+ +   +   P +S +G+    +  +   M ++ +D+       +            
Sbjct: 164 ETRLTDTPGLDDGPEYSPDGRHIWFNSTRSGLMQVWRMDIHGRNQTHVIKDDANCWFPHV 223

Query: 310 SPDSSQIVFESD-----------REGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSP 356
           SPD  ++V+ +             +   ++ ++ + G   + I+     + +     W+P
Sbjct: 224 SPDGQRVVYVAYDKDNVAPGDHPPDKPVEIRLVSAEGGKPRTIAQLFGGQGTLNVNSWAP 283

Query: 357 QGDLIAFTKFSG 368
               IAF  +  
Sbjct: 284 DNRHIAFVSYRP 295



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 38/119 (31%), Gaps = 13/119 (10%)

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +  + + ++ +     P W+  G  + F    G    +   +    +   +     +   
Sbjct: 30  TGARTVLKEFDVVIEAPNWTRDGRRLIFNSLGG----MFAYELSSGEVTRIDTGFAVDCN 85

Query: 396 ---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGF 445
                SP G  L  S     D  S++Y + L G     +          ++ D Q + +
Sbjct: 86  NDHVLSPDGARLAISHFAHEDVSSRIYIVPLGGGVPVRVTDLGPNYLHGWSPDGQRLAY 144


>gi|6119895|gb|AAF04275.1|AF181881_1 TolB [Helicobacter pylori]
          Length = 417

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 149/416 (35%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLICTIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDANYALKLHEVLANDLRTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++    V  E  +++    +L+DV   
Sbjct: 61  QHFDV--------SQNKDQGAINYAELKDKKVHLVALVSVAVENGNKIS-RLKLYDVNTS 111

Query: 137 KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
             +    +    A      AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 ALVKTFDYPILSADLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLIALNSKYIRRLTVNGSNQMPRFSTDGRNIMYIKKTSQEYAMGLILLDYN 400


>gi|255535417|ref|YP_003095788.1| WD40-like beta Propeller [Flavobacteriaceae bacterium 3519-10]
 gi|255341613|gb|ACU07726.1| WD40-like beta Propeller [Flavobacteriaceae bacterium 3519-10]
          Length = 741

 Score =  154 bits (388), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 53/284 (18%), Positives = 107/284 (37%), Gaps = 33/284 (11%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            D IY     +K      +  +S    +G  + +      DG +I Y +          +
Sbjct: 63  CDQIYLLDLTKKDTSVGDLKLIS----TGDGRTTCSFFMPDGKHILYASTHEASKACPEK 118

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
             P  +      +   +   +Y+ D    +  +++ +          S +GK  + +  +
Sbjct: 119 --PKPRTDGKYLWPVYEEFDIYIADLN-GKITRKLTDSPGYDAEAVVSPDGKYIVFTSMR 175

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---------------- 322
              ++++ +D+     ++LT  L  +  A +S DS ++VF S R                
Sbjct: 176 SGDLELWRMDIDGKNLKQLTTGLGYDGGAFFSHDSKKLVFRSSRPTSEKEVKEYRELLGE 235

Query: 323 ----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIG 374
                   ++Y M  +GSD K+++   +A++  P + P    I F+       G  F I 
Sbjct: 236 NLVAPTNMEIYTMNVDGSDLKQVTNLGKANW-SPYFHPSDRKIVFSSNHHSTRGYDFQIY 294

Query: 375 VMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSK 417
            +  DG     +  +S   A P +SP G+ L+FS  +      +
Sbjct: 295 SIDTDGRNLTQITYESEFNAFPMFSPDGKQLVFSSNRQAGKAHE 338



 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 69/303 (22%), Positives = 105/303 (34%), Gaps = 62/303 (20%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE---DILRVYLMDTR----IDRAPKRIG 254
           NIR LT   D       FSP+ +K+     + E      ++YL+D           K I 
Sbjct: 28  NIRKLTFGGDNAEAY--FSPDSKKLTLQVTNPEIGAQCDQIYLLDLTKKDTSVGDLKLIS 85

Query: 255 NFRSMILAPRFSSNGKRALISVQKD----------------------EAMDIYSVDLQSN 292
                     F  +GK  L +   +                      E  DIY  DL   
Sbjct: 86  TGDGRTTCSFFMPDGKHILYASTHEASKACPEKPKPRTDGKYLWPVYEEFDIYIADLNGK 145

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            T +LT++   +  A  SPD   IVF S R G  +L+ M  +G + K+++          
Sbjct: 146 ITRKLTDSPGYDAEAVVSPDGKYIVFTSMRSGDLELWRMDIDGKNLKQLTT-GLGYDGGA 204

Query: 353 VWSPQGDLIAFTKFSGE--------------------KFAIGVMKKDGSQERLLVEDSN- 391
            +S     + F                             I  M  DGS  + +      
Sbjct: 205 FFSHDSKKLVFRSSRPTSEKEVKEYRELLGENLVAPTNMEIYTMNVDGSDLKQVTNLGKA 264

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGS--KLYSIDLNGRNETLINT-------PAYASDPQW 442
             +P + PS R ++FS       G   ++YSID +GRN T I         P ++ D + 
Sbjct: 265 NWSPYFHPSDRKIVFSSNHHSTRGYDFQIYSIDTDGRNLTQITYESEFNAFPMFSPDGKQ 324

Query: 443 VGF 445
           + F
Sbjct: 325 LVF 327


>gi|57505319|ref|ZP_00371248.1| colicin tolerance-like protein (tolB) [Campylobacter upsaliensis
           RM3195]
 gi|315639284|ref|ZP_07894446.1| colicin tolerance family protein (tolB) [Campylobacter upsaliensis
           JV21]
 gi|57016455|gb|EAL53240.1| colicin tolerance-like protein (tolB) [Campylobacter upsaliensis
           RM3195]
 gi|315480610|gb|EFU71252.1| colicin tolerance family protein (tolB) [Campylobacter upsaliensis
           JV21]
          Length = 402

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 69/412 (16%), Positives = 154/412 (37%), Gaps = 36/412 (8%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSP-VSIAFTKFVSIDELGGKVSEVVSKDLQRSD 77
           +LLV +  F        V    N     P + +     +S   L      ++  DL+ S 
Sbjct: 4   ILLVFLAIFSAVWAEDPVIDVVNQGVVLPKIIVKDNSNLSDANLKRSFYNMIVNDLKVSS 63

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F ++ + S        +S   F+   +   + L            L ++ +        
Sbjct: 64  NFEVVDEGS-------ENSNYTFEYALAKNGENL-----------SLNIKIK----AGGV 101

Query: 138 QIIGKKFF-SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +   + +  +    +  +AH    D  Q +     ++    + ++ +  S   ++ + + 
Sbjct: 102 EKANQDYTLNKVEQYPFLAHKGVKDSVQFLGLAPVEWMDHKILIARTNSS--KRSQIIMA 159

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D      R +      +   P+++  +Q + Y T  D D   ++  D   ++A K + + 
Sbjct: 160 DYTLTYQRVIVDG--GLNLFPKWANEEQTMFYYTAYDHDKPTLFRFDLTNNKASKILSSG 217

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQ 315
             M++A   +  G + L+++   +  D+Y  DL S    +LTN   I+++A++   D S+
Sbjct: 218 -GMVVASDVNKKGDKILVTMAPQDQPDVYLYDLNSKNLSKLTNYSGIDVNANFIGEDESK 276

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---EKFA 372
           +VF SDR G   +++     +  ++       +      S   D + ++         F 
Sbjct: 277 VVFVSDRLGYPNIFIQNLGSTSAEQAVFHGRNN---SAVSTYKDFLVYSSREPKQAGVFN 333

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           I +M       R L  +     P +S  G S++F +     +   +  ++ N
Sbjct: 334 IYLMSIKSDYIRQLSANGKNLFPRFSSDGGSIVFIKHLGNQSALGVIRVNAN 385


>gi|86135211|ref|ZP_01053793.1| putative TolB protein [Polaribacter sp. MED152]
 gi|85822074|gb|EAQ43221.1| putative TolB protein [Polaribacter sp. MED152]
          Length = 365

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 63/316 (19%), Positives = 125/316 (39%), Gaps = 54/316 (17%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE---- 234
            VS S V     + +   ++   ++R +T   D       +S + +++ + +   +    
Sbjct: 24  VVSNSEVEVAKDSLIYPEEKYFKSLRQVTFGGDNAEAY--WSFDDKQLVFQSNYTKWNVG 81

Query: 235 --DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-------------VQKD 279
              +  +   +   +  P  I   +       F  + K  + +             ++K+
Sbjct: 82  CDQMFLMNADENFKNSMPPMISTGKGRTTCAYFLPDNKHIIYASTHLVDEECPEVPLRKN 141

Query: 280 E--------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                    + DI+  DL+ N  ++LTN +  +   + SP   +IVF S R G  +LY M
Sbjct: 142 GKYIWPVYDSFDIFVADLEGNIVKQLTNEVGYDAEPTVSPKGDKIVFTSTRSGDLELYTM 201

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------------------KF 371
             +G+D K+I+ D+        +SP G  I F     +                    + 
Sbjct: 202 NIDGTDVKQIT-DELGYDGGAFFSPDGTKIIFRSSRPKTEEEIKAYKDLLAEGLVEPTEM 260

Query: 372 AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGS--KLYSIDLNGRN- 427
            + +   DGS  R L +  N   +P + PSG+ ++FS   + + G    LY ID++G+N 
Sbjct: 261 ELYICNADGSDLRQLTDLGNANWSPFFHPSGKKILFSSNFEAERGFPFNLYLIDIDGKNL 320

Query: 428 ETLINTPAYASDPQWV 443
           E + +   + + P + 
Sbjct: 321 ERVTHGETFDAFPVFS 336



 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 50/292 (17%), Positives = 113/292 (38%), Gaps = 54/292 (18%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGAN-----IRYLTPSRDQILFEPRFSPNQQKVAY 228
           + +++F S      +  + + +M+ D  N        ++  + +      F P+ + + Y
Sbjct: 66  DKQLVFQSNYTKWNVGCDQMFLMNAD-ENFKNSMPPMISTGKGRTTCA-YFLPDNKHIIY 123

Query: 229 AT--------------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           A+                    +   D   +++ D       K++ N       P  S  
Sbjct: 124 ASTHLVDEECPEVPLRKNGKYIWPVYDSFDIFVADLE-GNIVKQLTNEVGYDAEPTVSPK 182

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--- 325
           G + + +  +   +++Y++++     +++T+ L  +  A +SPD ++I+F S R      
Sbjct: 183 GDKIVFTSTRSGDLELYTMNIDGTDVKQITDELGYDGGAFFSPDGTKIIFRSSRPKTEEE 242

Query: 326 -----------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-- 366
                             +LY+  ++GSD ++++    A++  P + P G  I F+    
Sbjct: 243 IKAYKDLLAEGLVEPTEMELYICNADGSDLRQLTDLGNANW-SPFFHPSGKKILFSSNFE 301

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTG 415
              G  F + ++  DG     +       A P +S  G+ L FS  ++   G
Sbjct: 302 AERGFPFNLYLIDIDGKNLERVTHGETFDAFPVFSNDGKKLAFSSNRNNGGG 353



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           +  R++   + +  +       G    +ILF S          +L ++D DG N+  +T 
Sbjct: 270 SDLRQLTD-LGNANWSPFFHPSG---KKILFSSNFEAERGFPFNLYLIDIDGKNLERVTH 325

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILR 238
             +     P FS + +K+A+++  +    R
Sbjct: 326 G-ETFDAFPVFSNDGKKLAFSSNRNNGGGR 354


>gi|118474869|ref|YP_892654.1| translocation protein TolB [Campylobacter fetus subsp. fetus 82-40]
 gi|118414095|gb|ABK82515.1| protein TolB [Campylobacter fetus subsp. fetus 82-40]
          Length = 421

 Score =  153 bits (387), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 71/425 (16%), Positives = 170/425 (40%), Gaps = 26/425 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSI--AFTKFVSIDELGGKVSEVVS 70
           M+    L+   IG    ++  A ++V         + +  A T F + + L  +  +++ 
Sbjct: 1   MRKLFLLIAFCIGL---SAADATIEVVNKGLVLPRIVVQDATTNFAN-NTLKNRFFKLMI 56

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+    F +I  + +     + D      +      ++++   +  EG   L ++ +L
Sbjct: 57  GDLKVGSSFEVI--EDYYTSSYDGDFRTNLAN--DKNPELILRYALGVEGNG-LTLKVKL 111

Query: 131 WDVKDRKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            + K+        F  +  A +  +AH     I +++     D+  + + +S+    G  
Sbjct: 112 LNAKNGSVRFEGTFSQAELAKFPFLAHKSIATIARNLNLSPIDWMDKSIIISQYTSPG-- 169

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K+++ V D      + +      +   P+++   Q   Y T     +  +Y  D    + 
Sbjct: 170 KSNIIVADYTLTYQKVILSG--GLNIFPKWANKDQSAFYYTTYINLVPTLYKYDLATGKK 227

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K I     M++A   SS+G + L+++  D+  DIY  D  +    R+T+   I+++ ++
Sbjct: 228 TK-ITQSGGMLVASDVSSDGTKVLLTMAPDDQSDIYIYDTTTKKKSRITDFKGIDVNGNF 286

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--- 366
             + +++VF SDR G   ++    NG   +++    + +     +    + + ++     
Sbjct: 287 VDNDTRVVFVSDRLGYPNIFATSINGGAVEQMVFHGKNNNSVSTYQ---NYVVYSSRESV 343

Query: 367 ---SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              S + F + ++       R L        P +S  G S++F +    ++   +  ++ 
Sbjct: 344 GDYSAKTFNLYLISTKSDYIRQLTSGGVNTYPRFSSDGGSIVFIKNAGNESAVGIIRVNE 403

Query: 424 NGRNE 428
           N   +
Sbjct: 404 NKSFQ 408


>gi|308184867|ref|YP_003929000.1| translocation protein TolB [Helicobacter pylori SJM180]
 gi|308060787|gb|ADO02683.1| translocation protein TolB [Helicobacter pylori SJM180]
          Length = 417

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 149/416 (35%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLICTIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDANYALKLHEVLANDLKTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++    V  E  +++    +L+DV   
Sbjct: 61  QHFDV--------SQNKDQGAINYAELKDKKVHLVALVSVAVENGNKIS-RLKLYDVNTS 111

Query: 137 KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
             +    +    A      AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 ALVKTFDYPILSADLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIRPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLITLNSKYIRRLTVNGSNQMPRFSTDGRNIMYIKKTPQEYAMGLILLDYN 400


>gi|301058338|ref|ZP_07199371.1| TolB amino-terminal domain protein [delta proteobacterium NaphS2]
 gi|300447574|gb|EFK11306.1| TolB amino-terminal domain protein [delta proteobacterium NaphS2]
          Length = 215

 Score =  153 bits (386), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 13/193 (6%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFVSID------ELGGKVSEVVSKDLQRSDVFNLISQD 85
             A + +  N+ +    +IA   F +        EL  ++  VVS DL  S  FN + + 
Sbjct: 25  ATARIYIDVNAPSVQKFNIAIPDFQNQGGGCPRLELSSELPGVVSNDLDLSGYFNPLDKA 84

Query: 86  SFKQKITNP--DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK 143
           SF +    P       F+DW+ +GA++L+ G     G ++L VE RL+DV   +QI+GK+
Sbjct: 85  SFLEGKNGPIKGKDINFKDWSVIGAELLLKGGYTCSG-NQLEVEIRLFDVFFGRQILGKR 143

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
              S   +R + H +S++I + +TG +G   +R+ FV     +   +  +   D DG N+
Sbjct: 144 AIGSLDDYRHLMHRLSNEIIKRLTGHEGISMTRLAFV----GTATGQREIYACDYDGRNV 199

Query: 204 RYLTPSRDQILFE 216
           R LT  +   L  
Sbjct: 200 RPLTKDKSIALCP 212


>gi|255013144|ref|ZP_05285270.1| periplasmic component of the Tol biopolymer transport system
           [Bacteroides sp. 2_1_7]
          Length = 260

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 16/207 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S + +++A +    ED              P+ I       L   +S +GK+     ++
Sbjct: 53  ISADGKQIAISNGTKEDGRSRIYTLPFEGGVPRLITPLGPSYLH-GWSPDGKQLAYCAER 111

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   D+Y +       +RLT    ++    YSP    I F S R G  Q++ M+++GS+Q
Sbjct: 112 NGNFDVYVIPALGGEEKRLTTAEGLDDGPEYSPCGQYIWFNSVRTGLMQVWRMKADGSEQ 171

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVMKKDGSQERLLV 387
            +++ D+  + + P  SP G  I F              + +   + +M  +G + + LV
Sbjct: 172 TQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEPGQHLANKNVELRLMPAEGGEPKTLV 231

Query: 388 E----DSNLQAPTWSPSGRSLIFSRKK 410
           +       +   +W+P  +   F   +
Sbjct: 232 KLFGGQGTINVNSWAPDSKRFAFVSYR 258



 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 16/235 (6%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGK 270
           ++  P ++P+   + Y +       ++Y +       P+ I +  +         S++GK
Sbjct: 4   LIEAPNWTPDGNWLVYNS-----GGKLYKLSPESPGEPQLINSDYATRCNNDHVISADGK 58

Query: 271 RALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           +  IS   ++D    IY++  +      +T  L  +    +SPD  Q+ + ++R G   +
Sbjct: 59  QIAISNGTKEDGRSRIYTLPFEGGVPRLIT-PLGPSYLHGWSPDGKQLAYCAERNGNFDV 117

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
           YV+ + G ++KR++   E     P +SP G  I F         +  MK DGS++  +  
Sbjct: 118 YVIPALGGEEKRLTT-AEGLDDGPEYSPCGQYIWFNSVRTGLMQVWRMKADGSEQTQMTF 176

Query: 388 -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            E  N   P  SP G+ ++F     GD     +  +   +N  L   PA   +P+
Sbjct: 177 DETRNSWFPHISPDGKQIVFITYTKGDLEPGQHLAN---KNVELRLMPAEGGEPK 228



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 14/183 (7%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI---NISASYSPD 312
           F  +I AP ++ +G   +     +    +Y +  +S    +L N+ +    N     S D
Sbjct: 1   FPFLIEAPNWTPDGNWLVY----NSGGKLYKLSPESPGEPQLINSDYATRCNNDHVISAD 56

Query: 313 SSQIVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             QI   +    +G+ ++Y +   G   + I+    +      WSP G  +A+       
Sbjct: 57  GKQIAISNGTKEDGRSRIYTLPFEGGVPRLITPLGPSYLHG--WSPDGKQLAYCAERNGN 114

Query: 371 FAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           F + V+   G +E RL   +     P +SP G+ + F+  + G    +++ +  +G  +T
Sbjct: 115 FDVYVIPALGGEEKRLTTAEGLDDGPEYSPCGQYIWFNSVRTGLM--QVWRMKADGSEQT 172

Query: 430 LIN 432
            + 
Sbjct: 173 QMT 175



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 46/135 (34%), Gaps = 40/135 (29%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  M  DG+    +T    +  + P  SP+ +++ + TY   D+               
Sbjct: 160 QVWRMKADGSEQTQMTFDETRNSWFPHISPDGKQIVFITYTKGDLEP------------- 206

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF----INISA 307
                            G+        ++ +++  +  +    + L         IN++ 
Sbjct: 207 -----------------GQHLA-----NKNVELRLMPAEGGEPKTLVKLFGGQGTINVN- 243

Query: 308 SYSPDSSQIVFESDR 322
           S++PDS +  F S R
Sbjct: 244 SWAPDSKRFAFVSYR 258


>gi|58700237|ref|ZP_00374719.1| tolB protein, putative [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58533245|gb|EAL57762.1| tolB protein, putative [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 226

 Score =  153 bits (386), Expect = 7e-35,   Method: Composition-based stats.
 Identities = 58/225 (25%), Positives = 108/225 (48%), Gaps = 20/225 (8%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVS----IDELGGKVSEVVSKDLQR 75
           L++ I  F P    A + V    ++   + +  +K         EL   +++V+  +L  
Sbjct: 7   LVLFISLFIPYFTKAALYVDIKKSSVGNIGLVVSKCTCKTALESELSENIAKVIGTNLSN 66

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
             +FN+       ++    +S    + W S     +VT  + +     L + FRL+D   
Sbjct: 67  CGLFNV-------KRGAEAES----KSWKS---DTVVTVSLSEISGSALELSFRLFDTFT 112

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLC 194
           +++++ +        WRKI H +SD I+  + GEKG FN++I +++E   S       + 
Sbjct: 113 KRELLTQSVVFPAKDWRKIGHLVSDVIHDRLIGEKGHFNTKITYIAEEKDSNYKSVRKIA 172

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           VM++DG+NI+YLT   D+ +  PRFSPN + + Y +Y +     +
Sbjct: 173 VMNQDGSNIKYLTNG-DRFVSTPRFSPNGKGIVYISYANGKSYII 216



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 372 AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            I VM +DGS  + L   D  +  P +SP+G+ +++    +G +   L
Sbjct: 170 KIAVMNQDGSNIKYLTNGDRFVSTPRFSPNGKGIVYISYANGKSYIIL 217



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            I  ++   +  + LTN      +  +SP+   IV+ S   GK  + +     +
Sbjct: 170 KIAVMNQDGSNIKYLTNGDRFVSTPRFSPNGKGIVYISYANGKSYIILKNLKDT 223



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           S+ +   ++ VM  +GS+ K ++ + +     P +SP G  I +  ++  K  I +   
Sbjct: 163 SNYKSVRKIAVMNQDGSNIKYLT-NGDRFVSTPRFSPNGKGIVYISYANGKSYIILKNL 220


>gi|332827955|gb|EGK00677.1| hypothetical protein HMPREF9455_02951 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 291

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 16/204 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +A +     D      +       PK++       +   +S +GK       ++
Sbjct: 84  SPDGRLMAISHRSLPDGRPTIFVLPDEGGEPKQVTPSLPSYMH-GWSPDGKMLTYCANRN 142

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             MD+Y++ +      RLT +  +N    YSPD   I F S R G  Q++ M+++GS+Q 
Sbjct: 143 GEMDVYTISIDGTNETRLTTSEGLNDGPEYSPDGKYIWFNSVRTGLMQIWRMKTDGSEQT 202

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIGVMKKDGSQERLLVE 388
           +I+ D +++ + P  SP G  + +  +                 I ++   G + + LV+
Sbjct: 203 QITFDDDSNSWFPHLSPDGKNVVYIAYRKGDLEPHEHLRYKHVEIRMIPATGGEPQTLVK 262

Query: 389 ----DSNLQAPTWSPSGRSLIFSR 408
                      +W+P  +   F  
Sbjct: 263 LFGGQGTFNVNSWAPDSKRFAFVS 286



 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 105/247 (42%), Gaps = 16/247 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM- 259
           A  R +      ++  P ++P+ + + Y +        +Y +       P+ I    +  
Sbjct: 22  AGRRTIVKEFPYLIEAPDWTPDGKHLIYNSEGL-----IYKLPADFFGEPELIDTGFATR 76

Query: 260 -ILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                  S +G+   IS +   D    I+ +  +    +++T +L  +    +SPD   +
Sbjct: 77  CNNDHLVSPDGRLMAISHRSLPDGRPTIFVLPDEGGEPKQVTPSL-PSYMHGWSPDGKML 135

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            + ++R G+  +Y +  +G+++ R++   E     P +SP G  I F         I  M
Sbjct: 136 TYCANRNGEMDVYTISIDGTNETRLTT-SEGLNDGPEYSPDGKYIWFNSVRTGLMQIWRM 194

Query: 377 KKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           K DGS++  +   +DSN   P  SP G+++++   + GD     +   L  ++  +   P
Sbjct: 195 KTDGSEQTQITFDDDSNSWFPHLSPDGKNVVYIAYRKGDLEPHEH---LRYKHVEIRMIP 251

Query: 435 AYASDPQ 441
           A   +PQ
Sbjct: 252 ATGGEPQ 258



 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 85/221 (38%), Gaps = 16/221 (7%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           +   +  +  +          +  F  +I AP ++ +GK  +     +    IY +    
Sbjct: 7   EPSKVTSILEIYDITAGRRTIVKEFPYLIEAPDWTPDGKHLIY----NSEGLIYKLPADF 62

Query: 292 NATERLTNTLFI---NISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKE 346
                L +T F    N     SPD   +     S  +G+  ++V+   G + K+++    
Sbjct: 63  FGEPELIDTGFATRCNNDHLVSPDGRLMAISHRSLPDGRPTIFVLPDEGGEPKQVTPSLP 122

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLI 405
           +      WSP G ++ +      +  +  +  DG+ E RL   +     P +SP G+ + 
Sbjct: 123 SYMHG--WSPDGKMLTYCANRNGEMDVYTISIDGTNETRLTTSEGLNDGPEYSPDGKYIW 180

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           F+  + G    +++ +  +G  +T I     ++   W   +
Sbjct: 181 FNSVRTGLM--QIWRMKTDGSEQTQITFDDDSN--SWFPHL 217



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 83/208 (39%), Gaps = 19/208 (9%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + R++ +S   +    + ++ V+  +G   + +TPS    +    +SP+ + + Y    +
Sbjct: 86  DGRLMAISHRSLPD-GRPTIFVLPDEGGEPKQVTPSLPSYMHG--WSPDGKMLTYCANRN 142

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            + + VY +         R+     +   P +S +GK    +  +   M I+ +    + 
Sbjct: 143 GE-MDVYTISID-GTNETRLTTSEGLNDGPEYSPDGKYIWFNSVRTGLMQIWRMKTDGSE 200

Query: 294 TERLT-NTLFINISASYSPDSSQIVFESDREG-----------KEQLYVMQSNGSDQKRI 341
             ++T +    +     SPD   +V+ + R+G             ++ ++ + G + + +
Sbjct: 201 QTQITFDDDSNSWFPHLSPDGKNVVYIAYRKGDLEPHEHLRYKHVEIRMIPATGGEPQTL 260

Query: 342 --SQDKEASYFDPVWSPQGDLIAFTKFS 367
                 + ++    W+P     AF  FS
Sbjct: 261 VKLFGGQGTFNVNSWAPDSKRFAFVSFS 288


>gi|168701247|ref|ZP_02733524.1| tolB protein [Gemmata obscuriglobus UQM 2246]
          Length = 337

 Score =  152 bits (385), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 64/314 (20%), Positives = 125/314 (39%), Gaps = 50/314 (15%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R L V  S  +G  +  L V    GA  R           EP +SP+ +++A+ +    
Sbjct: 29  PRGLLVVTSNTNGNWEIYL-VQASTGAARR--LTDNTASDTEPVWSPDGKRIAFTSDRAG 85

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +   V+LM+      P+++          R+S +GKR   + +++    + +V++ +   
Sbjct: 86  EP-DVWLMNAD-GTEPEQLTKKCGGCTGLRWSPDGKRIAFTGRQNGIEQVMAVEVATGKV 143

Query: 295 ERLTNTLFINISASYSPDSSQIVF------------------------------------ 318
            RL +   +   AS+SPD  ++ F                                    
Sbjct: 144 SRLIDGTVLCRHASWSPDGKKLSFGYFPGRYAIYTATAEGKELAELTDKKGGLDAAWSPN 203

Query: 319 -------ESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEK 370
                    D +   Q++V+ ++G+++K++++         P+WSP G+ I+F +    K
Sbjct: 204 GQQLAFMTLDADRDWQVFVIGADGNNKKQLTKSANNYGARYPLWSPDGNFISFEEIVDGK 263

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             + VM+ DGS  +++          WSP G+SL ++R + G     L+  D +G N   
Sbjct: 264 LQVAVMRADGSDPKVITSKHEHTLTRWSPDGKSLSYARSEKGQL-PALWVSDPDGGNAKE 322

Query: 431 INTPAYASDPQWVG 444
           +         +W  
Sbjct: 323 LLGGVGTWAAEWKP 336



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 42/98 (42%), Gaps = 11/98 (11%)

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDT 414
           P+G L+  T  +   + I +++      R L +  ++   P WSP G+ + F+  + G+ 
Sbjct: 29  PRG-LLVVTSNTNGNWEIYLVQASTGAARRLTDNTASDTEPVWSPDGKRIAFTSDRAGE- 86

Query: 415 GSKLYSIDLNGRNETLI-------NTPAYASDPQWVGF 445
              ++ ++ +G     +           ++ D + + F
Sbjct: 87  -PDVWLMNADGTEPEQLTKKCGGCTGLRWSPDGKRIAF 123


>gi|108563490|ref|YP_627806.1| translocation protein TolB [Helicobacter pylori HPAG1]
 gi|118574582|sp|Q1CSE0|TOLB_HELPH RecName: Full=Protein tolB; Flags: Precursor
 gi|107837263|gb|ABF85132.1| TonB-independent protein-uptake protein [Helicobacter pylori HPAG1]
          Length = 417

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 65/416 (15%), Positives = 152/416 (36%), Gaps = 29/416 (6%)

Query: 19  LLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL--GGKVSEVVSKDLQRS 76
           L L LIG     +    + +         +     ++ + ++     K+ EV++ DL+ S
Sbjct: 4   LWLFLIGTIGLFATDKTLDIIKT---IQKLPKIEVRYSTDNDANYALKLHEVLANDLKTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++    V  E  +++    +L+DV   
Sbjct: 61  QHFDV--------SQNKDQGAINYTELKDKKVHLVALVSVAVENGNKIS-RLKLYDVNTS 111

Query: 137 KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
             +    +    A      AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 TLVKTFDYPILSADLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLITLNSKYIRRLTVNGSNQMPRFSTDGRNIMYIKKTPQEYAMGLILLDYN 400


>gi|208435024|ref|YP_002266690.1| TonB-independent protein-uptake protein [Helicobacter pylori G27]
 gi|208432953|gb|ACI27824.1| TonB-independent protein-uptake protein [Helicobacter pylori G27]
          Length = 417

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 68/416 (16%), Positives = 151/416 (36%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLICAIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDANYALKLHEVLANDLKTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +      Q++    V  E  +++    +L+DV   
Sbjct: 61  QHFDV--------SQNKDQGAINYAELKDKKFQLVALVSVAVENGNKIS-RLKLYDVNTS 111

Query: 137 KQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
             +    +   S   +   AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 ALVKTFDYPILSTDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLITLNSKYIRRLTVNGSNQMPRFSTDGRNIMYIKKTPQEYAMGLILLDYN 400


>gi|15965598|ref|NP_385951.1| hypothetical protein SMc00162 [Sinorhizobium meliloti 1021]
 gi|307302718|ref|ZP_07582474.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
 gi|307318566|ref|ZP_07598000.1| putative TolB-like protein [Sinorhizobium meliloti AK83]
 gi|15074779|emb|CAC46424.1| Probable periplasmic component of the Tol biopolymer transport
           system [Sinorhizobium meliloti 1021]
 gi|306895906|gb|EFN26658.1| putative TolB-like protein [Sinorhizobium meliloti AK83]
 gi|306903082|gb|EFN33673.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
          Length = 275

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/236 (22%), Positives = 91/236 (38%), Gaps = 16/236 (6%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                L  +  DG++   +     +        SP+   +  +   +     +YL+    
Sbjct: 40  NGDGRLYRLGFDGSDPTEIDTGFARHCNNDHGISPDGSTLVISDKTEFGSSAIYLLPAEG 99

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                   N  S      +S +G+       +D+  DIY++ +      RLT     N  
Sbjct: 100 GTPRLVTRNLPSYWHG--WSPDGRMLAYCGIRDQVFDIYTIPVDGGEERRLTQGQGRNDG 157

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +S D   I F S R G+ Q++ ++ +G D +RI+      +F P  SP G  +    +
Sbjct: 158 PDWSADGEWIYFNSSRTGRMQIWRVRPDGKDVQRITDSPYGDWF-PHPSPDGRHLLVLSY 216

Query: 367 SGEKF--------AIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKK 410
            G+ F         + +M  DG   R+L+E       +  P WSPSG +  F R +
Sbjct: 217 DGDVFDHPRDLDVRLRLMDPDGGNARVLLELFGGQGTVNVPNWSPSGTAFAFVRYE 272



 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 93/253 (36%), Gaps = 20/253 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAP 263
            +    ++++  P +SP+ + +           R+Y +        +    F        
Sbjct: 16  RVVWQTERLVEAPNWSPDGKFLI-----INGDGRLYRLGFDGSDPTEIDTGFARHCNNDH 70

Query: 264 RFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             S +G   +IS + +  +  IY +  +      +T  L  +    +SPD   + +   R
Sbjct: 71  GISPDGSTLVISDKTEFGSSAIYLLPAEGGTPRLVTRNL-PSYWHGWSPDGRMLAYCGIR 129

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +    +Y +  +G +++R++Q +  +   P WS  G+ I F      +  I  ++ DG  
Sbjct: 130 DQVFDIYTIPVDGGEERRLTQGQGRND-GPDWSADGEWIYFNSSRTGRMQIWRVRPDGKD 188

Query: 383 ERLLVED-SNLQAPTWSPSGRSLIFSRKKDG------DTGSKLYSIDLNGRNETLI---- 431
            + + +       P  SP GR L+             D   +L  +D +G N  ++    
Sbjct: 189 VQRITDSPYGDWFPHPSPDGRHLLVLSYDGDVFDHPRDLDVRLRLMDPDGGNARVLLELF 248

Query: 432 NTPAYASDPQWVG 444
                 + P W  
Sbjct: 249 GGQGTVNVPNWSP 261



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 82/203 (40%), Gaps = 17/203 (8%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI--N 304
               + +     ++ AP +S +GK  +I    +    +Y +    +    +        N
Sbjct: 12  TGETRVVWQTERLVEAPNWSPDGKFLII----NGDGRLYRLGFDGSDPTEIDTGFARHCN 67

Query: 305 ISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                SPD S +V  SD+   G   +Y++ + G   + ++++  + +    WSP G ++A
Sbjct: 68  NDHGISPDGSTLV-ISDKTEFGSSAIYLLPAEGGTPRLVTRNLPSYWHG--WSPDGRMLA 124

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +     + F I  +  DG +ER L +       P WS  G  + F+  + G    +++ +
Sbjct: 125 YCGIRDQVFDIYTIPVDGGEERRLTQGQGRNDGPDWSADGEWIYFNSSRTGRM--QIWRV 182

Query: 422 DLNGRNETLINTPAYASDPQWVG 444
             +G++   I     +    W  
Sbjct: 183 RPDGKDVQRIT---DSPYGDWFP 202



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 85/201 (42%), Gaps = 14/201 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  S  +    +++ ++  +G   R +T  R+   +   +SP+ + +AY    D  +  +
Sbjct: 79  LVISDKTEFGSSAIYLLPAEGGTPRLVT--RNLPSYWHGWSPDGRMLAYCGIRD-QVFDI 135

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y +        +R+   +     P +S++G+    +  +   M I+ V       +R+T+
Sbjct: 136 YTIPVD-GGEERRLTQGQGRNDGPDWSADGEWIYFNSSRTGRMQIWRVRPDGKDVQRITD 194

Query: 300 TLFINISASYSPDSSQI--------VFESDREGKEQLYVMQSNGSDQKRIS--QDKEASY 349
           + + +     SPD   +        VF+  R+   +L +M  +G + + +      + + 
Sbjct: 195 SPYGDWFPHPSPDGRHLLVLSYDGDVFDHPRDLDVRLRLMDPDGGNARVLLELFGGQGTV 254

Query: 350 FDPVWSPQGDLIAFTKFSGEK 370
             P WSP G   AF ++  E+
Sbjct: 255 NVPNWSPSGTAFAFVRYEPEE 275



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 15/169 (8%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQD 344
             D+ +  T  +  T  +  + ++SPD   ++      G  +LY +  +GSD   I +  
Sbjct: 7   IFDIATGETRVVWQTERLVEAPNWSPDGKFLI----INGDGRLYRLGFDGSDPTEIDTGF 62

Query: 345 KEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                 D   SP G  +  + K      AI ++  +G   RL+  +       WSP GR 
Sbjct: 63  ARHCNNDHGISPDGSTLVISDKTEFGSSAIYLLPAEGGTPRLVTRNLPSYWHGWSPDGRM 122

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           L +   +  D    +Y+I ++G  E  +         P +++D +W+ F
Sbjct: 123 LAYCGIR--DQVFDIYTIPVDGGEERRLTQGQGRNDGPDWSADGEWIYF 169


>gi|332665861|ref|YP_004448649.1| hypothetical protein Halhy_3928 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332334675|gb|AEE51776.1| hypothetical protein Halhy_3928 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 527

 Score =  152 bits (384), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 17/206 (8%)

Query: 220 SPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQ 277
           S N +K+A + +  E  I  ++++       P+ I            +S +GK+ + + Q
Sbjct: 320 SFNGKKLALSNHMGETRISTLFILPVTGSDQPEAITAPESGHSYLHGWSPDGKKLIFTGQ 379

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +++  DI+SVD+ +     LTNTL ++ S  ++PD   I F S R G  +L+ M+ +GS 
Sbjct: 380 RNKQYDIWSVDIATKKETPLTNTLTLDDSPEFTPDGKWIYFNSVRTGTMKLWRMKPDGSQ 439

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----------KFAIGVMKKDGSQERLLV 387
           Q++++ D E + + P  SP G  I +  +  E          K  + +M   G   R + 
Sbjct: 440 QEQVTFD-EYNDWFPHISPDGKWIVYLSYPKEINPTDHPWYQKIYLRLMPAAGGIPRNIA 498

Query: 388 ----EDSNLQAPTWSPSGRSLIFSRK 409
                   +  P+WSP  + + F   
Sbjct: 499 YVYGGQGTINVPSWSPDSKRIAFVSN 524



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 87/208 (41%), Gaps = 16/208 (7%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           FN + L +S + +     ++L ++   G++    +T       +   +SP+ +K+ +   
Sbjct: 321 FNGKKLALS-NHMGETRISTLFILPVTGSDQPEAITAPESGHSYLHGWSPDGKKLIFTGQ 379

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            ++    ++ +D    +    + N  ++  +P F+ +GK    +  +   M ++ +    
Sbjct: 380 RNKQ-YDIWSVDIAT-KKETPLTNTLTLDDSPEFTPDGKWIYFNSVRTGTMKLWRMKPDG 437

Query: 292 NATERLTNTLFINISASYSPDSSQIVFES--------DREGKEQLYV--MQSNGSDQKRI 341
           +  E++T   + +     SPD   IV+ S        D    +++Y+  M + G   + I
Sbjct: 438 SQQEQVTFDEYNDWFPHISPDGKWIVYLSYPKEINPTDHPWYQKIYLRLMPAAGGIPRNI 497

Query: 342 SQ--DKEASYFDPVWSPQGDLIAFTKFS 367
           +     + +   P WSP    IAF   +
Sbjct: 498 AYVYGGQGTINVPSWSPDSKRIAFVSNT 525



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 108/260 (41%), Gaps = 26/260 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVA----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +L    D+++ +  FS  +  +     +  Y D     + +MD       K + +  + +
Sbjct: 214 FLCSHEDKVVEKAVFSNVRITIPAAPDFRPYRDYLGSHIEVMDVHTG-LRKILHSAPNSL 272

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS--ASYSPDSSQIVF 318
            AP ++ +GK  +     +    +Y+ DL SN    L     IN +     S +  ++  
Sbjct: 273 QAPNWTKDGKTLIY----NSEGKMYNFDLASNTVSTLNTGFAINNNNDHVLSFNGKKLA- 327

Query: 319 ESDREGKEQL---YVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            S+  G+ ++   +++   GSDQ   I+  +    +   WSP G  + FT    +++ I 
Sbjct: 328 LSNHMGETRISTLFILPVTGSDQPEAITAPESGHSYLHGWSPDGKKLIFTGQRNKQYDIW 387

Query: 375 VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN- 432
            +     +E  L    +   +P ++P G+ + F+  + G    KL+ +  +G  +  +  
Sbjct: 388 SVDIATKKETPLTNTLTLDDSPEFTPDGKWIYFNSVRTGTM--KLWRMKPDGSQQEQVTF 445

Query: 433 ------TPAYASDPQWVGFM 446
                  P  + D +W+ ++
Sbjct: 446 DEYNDWFPHISPDGKWIVYL 465


>gi|154494285|ref|ZP_02033605.1| hypothetical protein PARMER_03636 [Parabacteroides merdae ATCC
           43184]
 gi|154085969|gb|EDN85014.1| hypothetical protein PARMER_03636 [Parabacteroides merdae ATCC
           43184]
          Length = 302

 Score =  152 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 81/207 (39%), Gaps = 16/207 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            + + +++A +    ED              P+ I       L   +S +G++      +
Sbjct: 90  IAADGKQIAISHGTKEDGKSRIYTLPMQGGTPRLITPIAPSYLH-GWSPDGRQLAYCADR 148

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
               DIY + ++     +LT    ++    YSP    I F S R G  Q++ M+ +GS+Q
Sbjct: 149 KGNYDIYVIPVEGGEERQLTTAEGLDDGPEYSPCGEYIWFNSVRTGLMQVWRMKKDGSEQ 208

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVMKKDGSQERLLV 387
            +++ D+  + + P  SP G  + F                +   + +M   G + + LV
Sbjct: 209 TQMTFDETRNSWFPHVSPDGKSVIFITYYKGDLEPGQHLPNKNVELRIMPATGGKPKTLV 268

Query: 388 E----DSNLQAPTWSPSGRSLIFSRKK 410
           +       +   +W+P  + + F   +
Sbjct: 269 KLFGGQGTINVNSWAPDSKHIAFVSYR 295



 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 114/268 (42%), Gaps = 32/268 (11%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--IL 261
           R +       +  P ++P+ Q + Y +       ++Y +       P+ I    +     
Sbjct: 32  RTVVKEFPYRVEAPNWTPDGQWLVYNS-----GGKLYKLSPDSPGEPEMINTGFATRCNN 86

Query: 262 APRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
               +++GK+  IS   ++D    IY++ +Q      +T  +  +    +SPD  Q+ + 
Sbjct: 87  DHVIAADGKQIAISHGTKEDGKSRIYTLPMQGGTPRLIT-PIAPSYLHGWSPDGRQLAYC 145

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +DR+G   +YV+   G ++++++   E     P +SP G+ I F         +  MKKD
Sbjct: 146 ADRKGNYDIYVIPVEGGEERQLTT-AEGLDDGPEYSPCGEYIWFNSVRTGLMQVWRMKKD 204

Query: 380 GSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGD---------TGSKLYSIDLN-GRN 427
           GS++  +   E  N   P  SP G+S+IF     GD            +L  +    G+ 
Sbjct: 205 GSEQTQMTFDETRNSWFPHVSPDGKSVIFITYYKGDLEPGQHLPNKNVELRIMPATGGKP 264

Query: 428 ETL---------INTPAYASDPQWVGFM 446
           +TL         IN  ++A D + + F+
Sbjct: 265 KTLVKLFGGQGTINVNSWAPDSKHIAFV 292



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 70/209 (33%), Gaps = 50/209 (23%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------- 321
                + Q D    +  +D+ +     +    +   + +++PD   +V+ S         
Sbjct: 8   TSLASAQQNDVTSILEVLDVTNGRRTVVKEFPYRVEAPNWTPDGQWLVYNSGGKLYKLSP 67

Query: 322 -------------------------------------REGKEQLYVMQSNGSDQKRISQD 344
                                                 +GK ++Y +   G   + I+  
Sbjct: 68  DSPGEPEMINTGFATRCNNDHVIAADGKQIAISHGTKEDGKSRIYTLPMQGGTPRLITPI 127

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRS 403
             A  +   WSP G  +A+       + I V+  +G +ER L   +     P +SP G  
Sbjct: 128 --APSYLHGWSPDGRQLAYCADRKGNYDIYVIPVEGGEERQLTTAEGLDDGPEYSPCGEY 185

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + F+  + G    +++ +  +G  +T + 
Sbjct: 186 IWFNSVRTGLM--QVWRMKKDGSEQTQMT 212



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 34/99 (34%), Gaps = 12/99 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI------------LRV 239
            +  M +DG+    +T    +  + P  SP+ + V + TY   D+            LR+
Sbjct: 197 QVWRMKKDGSEQTQMTFDETRNSWFPHVSPDGKSVIFITYYKGDLEPGQHLPNKNVELRI 256

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
                   +   ++   +  I    ++ + K       +
Sbjct: 257 MPATGGKPKTLVKLFGGQGTINVNSWAPDSKHIAFVSYR 295


>gi|116625879|ref|YP_828035.1| transcriptional regulatory protein-like protein [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116229041|gb|ABJ87750.1| transcriptional regulatory protein-like protein [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 370

 Score =  152 bits (383), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 53/260 (20%), Positives = 106/260 (40%), Gaps = 20/260 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V+   G     L+   D+ L    + P+ +++ +++     + +     +     P+
Sbjct: 3   ELHVVPVGGGESNRLSAG-DRRLSGLAWMPDGREIVFSS--RRGMPQQLWNVSASGGTPR 59

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL------QSNATERLTNTLFINI 305
            +       + P  S  G R           +I+ +DL       S    +L  + + + 
Sbjct: 60  ALPLVGEGTVWPAISRTGHRLAYVRS-TFDTNIWRLDLPREPNSSSGHPLKLIASTWRDN 118

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  YSPD +++ F SDR G   L+V  ++GS   +++   + +   P WSP G  IAF  
Sbjct: 119 NPQYSPDGTKVAFVSDRAGSLDLWVTNADGSSPFQLT--SQGAQSTPRWSPDGRRIAFAS 176

Query: 366 FSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           F+     I V+  +G   + +    +N  +P WS  GR + F+  + G   ++++     
Sbjct: 177 FANSNENIFVIDAEGGATKPITTGPANHNSPCWSSDGRWIYFTSNRTGK--AEIWRAPAE 234

Query: 425 GRNETLINTPAYASDPQWVG 444
           G +E+ +          W  
Sbjct: 235 GGSESQMTHQGG-----WAP 249



 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 99/242 (40%), Gaps = 8/242 (3%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+ +V  +  + I +  L       +       +       P++SP+  KVA+ +     
Sbjct: 79  RLAYVRSTFDTNIWRLDLPREPNSSSGHPLKLIASTWRDNNPQYSPDGTKVAFVSDRAG- 137

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              + L  T  D +       +     PR+S +G+R   +   +   +I+ +D +  AT+
Sbjct: 138 --SLDLWVTNADGSSPFQLTSQGAQSTPRWSPDGRRIAFASFANSNENIFVIDAEGGATK 195

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            +T     + S  +S D   I F S+R GK +++   + G  + +++       + P  S
Sbjct: 196 PITTGPANHNSPCWSSDGRWIYFTSNRTGKAEIWRAPAEGGSESQMTHQGG---WAPQES 252

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDT 414
           P G +I + K   E  AI  +  +G  E  ++E + +     W P    + F ++    +
Sbjct: 253 PDGKMIYYQKQFSET-AIWKIPPEGGVESPVLESATVANLYLWQPFNDDIYFVQRVRNSS 311

Query: 415 GS 416
            S
Sbjct: 312 IS 313



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 69/211 (32%), Gaps = 15/211 (7%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                R+      +    +  +G+  + S ++     +++V         L       + 
Sbjct: 11  GGESNRLSAGDRRLSGLAWMPDGREIVFSSRRGMPQQLWNVSASGGTPRALPLVGEGTVW 70

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQS-----NGSDQKRISQDKEASYFDPVWSPQGDLI 361
            + S    ++ +         ++ +       + S              +P +SP G  +
Sbjct: 71  PAISRTGHRLAYVRSTF-DTNIWRLDLPREPNSSSGHPLKLIASTWRDNNPQYSPDGTKV 129

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           AF         + V   DGS    L        P WSP GR + F+   +  +   ++ I
Sbjct: 130 AFVSDRAGSLDLWVTNADGSSPFQLTSQGAQSTPRWSPDGRRIAFASFAN--SNENIFVI 187

Query: 422 DLNGRNETLINT-------PAYASDPQWVGF 445
           D  G     I T       P ++SD +W+ F
Sbjct: 188 DAEGGATKPITTGPANHNSPCWSSDGRWIYF 218


>gi|57168719|ref|ZP_00367851.1| colicin tolerance-like protein (tolB) [Campylobacter coli RM2228]
 gi|57020000|gb|EAL56680.1| colicin tolerance-like protein (tolB) [Campylobacter coli RM2228]
          Length = 345

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 52/296 (17%), Positives = 120/296 (40%), Gaps = 13/296 (4%)

Query: 134 KDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
               +   + +  +S   +  +AH        ++     ++    + ++ +  S   K+ 
Sbjct: 41  AGGLEKSSQTYALNSVEQYPFLAHKSVKASVNALGLAPVEWMDHKILIARNSSS--KKSQ 98

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D      + +      +   P++   +Q + Y T  D D   +Y  D R ++A K 
Sbjct: 99  IIMADYTLTYQKVIIDG--GLNLFPKWGNKEQSIFYYTAYDHDRPTLYRYDLRTNKASKI 156

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SP 311
           + +   M++A   S +G + L+++   +  D+Y  DL S    +LTN   I+++ ++   
Sbjct: 157 LASG-GMVVASDVSLDGSKLLVTMAPKDQPDVYLYDLNSKNLTQLTNYSGIDVNGNFIGV 215

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           D S+ VF SDR G   +++   N    ++     + +      S   D + ++     + 
Sbjct: 216 DDSKFVFVSDRLGYPNIFIQNLNNGSAEQAVFHGKNN---SAVSTYKDFLVYSSREPNQV 272

Query: 371 --FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F I +M  + +  R    +     P +S  G S++F +     +   +  ++ N
Sbjct: 273 GVFNIYLMSINSTGIRQFTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNAN 328


>gi|110637833|ref|YP_678040.1| tol biopolymer transport system, periplasmic protein [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110280514|gb|ABG58700.1| tol biopolymer transport system, periplasmic protein [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 313

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 86/204 (42%), Gaps = 14/204 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+ +++  + ++ E    +          PK I           +S +G       ++
Sbjct: 109 ISPDNKQLVVSHHEKESGKSMIYTMPIGGGEPKLITPNAPSYWH-GWSPDGNTLAYCAER 167

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   DIY++       +RLT+   ++    Y+ D + I F S R GK +++ M+ +GS+Q
Sbjct: 168 NGEFDIYTIPANGGTEQRLTDAAGLDDGPDYTADGTYIYFNSVRTGKMKIWRMKPDGSEQ 227

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVE-- 388
           ++++ D    +F    SP G  I F  +        + +   + +M   G + R++ +  
Sbjct: 228 EQVTFDDYNDWFA-HPSPDGKYIVFVSYEPEVEGHPANKNVTLRLMPMQGGEPRVIAKLF 286

Query: 389 --DSNLQAPTWSPSGRSLIFSRKK 410
                +  P+WSP  +   F   K
Sbjct: 287 GGQGTINVPSWSPDSKRFAFVSYK 310



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 77/209 (36%), Gaps = 14/209 (6%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            + G        V         K+ +  M   G   + +TP  +   +   +SP+   +A
Sbjct: 105 NDHGISPDNKQLVVSHHEKESGKSMIYTMPIGGGEPKLITP--NAPSYWHGWSPDGNTLA 162

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y    + +   +Y +        +R+ +   +   P ++++G     +  +   M I+ +
Sbjct: 163 YCAERNGE-FDIYTIPAN-GGTEQRLTDAAGLDDGPDYTADGTYIYFNSVRTGKMKIWRM 220

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDR---EGKE-----QLYVMQSNGSDQK 339
               +  E++T   + +  A  SPD   IVF S     EG        L +M   G + +
Sbjct: 221 KPDGSEQEQVTFDDYNDWFAHPSPDGKYIVFVSYEPEVEGHPANKNVTLRLMPMQGGEPR 280

Query: 340 RIS--QDKEASYFDPVWSPQGDLIAFTKF 366
            I+     + +   P WSP     AF  +
Sbjct: 281 VIAKLFGGQGTINVPSWSPDSKRFAFVSY 309



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 81/213 (38%), Gaps = 22/213 (10%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI--N 304
               + I      + AP +S +    L     +   +IY +        ++        N
Sbjct: 49  SGTRQIIYQADENVEAPNWSRSDSFLLF----NMKGEIYRIPTTGGTPVKVNTGFATHCN 104

Query: 305 ISASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                SPD+ Q+V  S      GK  +Y M   G + K I+ +  + +    WSP G+ +
Sbjct: 105 NDHGISPDNKQLV-VSHHEKESGKSMIYTMPIGGGEPKLITPNAPSYWHG--WSPDGNTL 161

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           A+      +F I  +  +G  E+ L +       P ++  G  + F+  + G    K++ 
Sbjct: 162 AYCAERNGEFDIYTIPANGGTEQRLTDAAGLDDGPDYTADGTYIYFNSVRTGKM--KIWR 219

Query: 421 IDLNGRNETLINTPAY-------ASDPQWVGFM 446
           +  +G  +  +    Y       + D +++ F+
Sbjct: 220 MKPDGSEQEQVTFDDYNDWFAHPSPDGKYIVFV 252



 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 7/78 (8%)

Query: 160 DDIYQSITGEKGDFNSRILFVSES----VVSGIIKNSLCVMDRDGANIRYL--TPSRDQI 213
           DD          D    I+FVS              +L +M   G   R +         
Sbjct: 233 DDYNDWFAHPSPDGK-YIVFVSYEPEVEGHPANKNVTLRLMPMQGGEPRVIAKLFGGQGT 291

Query: 214 LFEPRFSPNQQKVAYATY 231
           +  P +SP+ ++ A+ +Y
Sbjct: 292 INVPSWSPDSKRFAFVSY 309


>gi|320106330|ref|YP_004181920.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319924851|gb|ADV81926.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
          Length = 760

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 68/315 (21%), Positives = 124/315 (39%), Gaps = 53/315 (16%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT-PSRDQILFEPRFSPNQQK 225
           TG     + + L VS+   SG     L   D +   +  LT PS D+    P  S + + 
Sbjct: 326 TGPSWSSDGKGLIVSDVAPSGRG-MGLYRFDLNTHELHSLTNPSSDERDLNPTLSSDGKW 384

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +AYA +   D   V++    +D   +R+ +  + +    +S+  +  + S  +  A  ++
Sbjct: 385 LAYARFSSYDSSDVFIRSL-LDGRERRLTSDHTDVQGLAWSAGNREIVFSSNRGGAYGLW 443

Query: 286 SVDLQSNATERL---------------------------------------TNTLFINIS 306
           ++ L       +                                       T+   ++++
Sbjct: 444 TIGLDGGNPSPISATGESAIQPAISRDGQFLVYADFTLRSEILKIGVSQAGTSVPPVSVA 503

Query: 307 AS--------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            S        +SPD S+I F SDR GK +L+V  ++G +  +++     S   P WSP G
Sbjct: 504 PSIRSSHSAQFSPDGSRIAFVSDRSGKWELWVSSADGKEASQLTNFDTGSVGSPRWSPDG 563

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSK 417
             IAF      + AI V+  DG   R L      +  P WS  G+ + F   + G    +
Sbjct: 564 LSIAFDARPNGRSAIFVISPDGQGLRNLSPKGQEEKQPAWSSDGKWIYFDSNRAGSM--Q 621

Query: 418 LYSIDLNGRNETLIN 432
           L+ +  +G + T ++
Sbjct: 622 LWKMTTSGSDATSVS 636



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 74/420 (17%), Positives = 131/420 (31%), Gaps = 129/420 (30%)

Query: 145 FSSPASWRKIAH-----TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
             +P  WR +A      T   + YQ      G   + I        +G    S+ V+   
Sbjct: 203 TRTPDHWRSVARIIPLTTFLGESYQPNVSPDGKSVAFIW------NNGGSTYSVYVVRPG 256

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATY-----------------------DDEDI 236
           G  +R    +       P +SP+   +A+                           +   
Sbjct: 257 GKPLR--VTAGPGTDIHPVWSPDGNLIAFLRVTSSGSQVRVVSFPGGSENALFALRNGRP 314

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILA---------------------------------- 262
               L+  R D  P    + + +I++                                  
Sbjct: 315 WSEDLLGIRNDTGPSWSSDGKGLIVSDVAPSGRGMGLYRFDLNTHELHSLTNPSSDERDL 374

Query: 263 -PRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            P  SS+GK    +     ++ D++   L      RLT+        ++S  + +IVF S
Sbjct: 375 NPTLSSDGKWLAYARFSSYDSSDVFIRSLLDGRERRLTSDHTDVQGLAWSAGNREIVFSS 434

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKE---------------------------------- 346
           +R G   L+ +  +G +   IS   E                                  
Sbjct: 435 NRGGAYGLWTIGLDGGNPSPISATGESAIQPAISRDGQFLVYADFTLRSEILKIGVSQAG 494

Query: 347 ------------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNL 392
                        S     +SP G  IAF      K+ + V   DG +   L   +  ++
Sbjct: 495 TSVPPVSVAPSIRSSHSAQFSPDGSRIAFVSDRSGKWELWVSSADGKEASQLTNFDTGSV 554

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
            +P WSP G S+ F  + +G   S ++ I  +G+    ++        PA++SD +W+ F
Sbjct: 555 GSPRWSPDGLSIAFDARPNGR--SAIFVISPDGQGLRNLSPKGQEEKQPAWSSDGKWIYF 612



 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 98/258 (37%), Gaps = 30/258 (11%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           ++P  SP+ + VA+   +      VY+   R    P R+       + P +S +G     
Sbjct: 226 YQPNVSPDGKSVAFIWNNGGSTYSVYV--VRPGGKPLRVTAGPGTDIHPVWSPDGNLIAF 283

Query: 275 SVQKDEAMDIYSVDLQSNATERLTN------------TLFINISASYSPDSSQIVFESD- 321
                    +  V     +   L               +  +   S+S D   ++  SD 
Sbjct: 284 LRVTSSGSQVRVVSFPGGSENALFALRNGRPWSEDLLGIRNDTGPSWSSDGKGLI-VSDV 342

Query: 322 --REGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMK 377
                   LY    N  +   ++    +    +P  S  G  +A+ +FS  +   + +  
Sbjct: 343 APSGRGMGLYRFDLNTHELHSLTNPSSDERDLNPTLSSDGKWLAYARFSSYDSSDVFIRS 402

Query: 378 -KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN---- 432
             DG + RL  + +++Q   WS   R ++FS  + G  G  L++I L+G N + I+    
Sbjct: 403 LLDGRERRLTSDHTDVQGLAWSAGNREIVFSSNRGGAYG--LWTIGLDGGNPSPISATGE 460

Query: 433 ---TPAYASDPQWVGFMD 447
               PA + D Q++ + D
Sbjct: 461 SAIQPAISRDGQFLVYAD 478



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 84/214 (39%), Gaps = 22/214 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQ 277
           FSP+  ++A+ +           + +   +   ++ NF    + +PR+S +G       +
Sbjct: 514 FSPDGSRIAFVSDRSGKWE--LWVSSADGKEASQLTNFDTGSVGSPRWSPDGLSIAFDAR 571

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            +    I+ +         L+         ++S D   I F+S+R G  QL+ M ++GSD
Sbjct: 572 PNGRSAIFVISPDGQGLRNLSPKGQEEKQPAWSSDGKWIYFDSNRAGSMQLWKMTTSGSD 631

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              +SQ    +  D   +P G  I +T  +     +  M   G     +     L+   +
Sbjct: 632 ATSVSQF---ALTDAHIAPDGKSIFYTNGTEG---LWQMPLSGGSPVQI---PGLEHCRF 682

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              GR  +++    G     +Y +++ G    +I
Sbjct: 683 ---GR--LWTISDGG-----IYYVNIRGDRSKVI 706


>gi|332883942|gb|EGK04222.1| hypothetical protein HMPREF9456_01250 [Dysgonomonas mossii DSM
           22836]
          Length = 306

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 86/206 (41%), Gaps = 16/206 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + +++A +    ED              P+ I       L   +S +G       ++ 
Sbjct: 98  SFDGKQIAISHGTKEDGQSRIYTLPIGGGDPQLITPLAPSYLH-GWSPDGLYLTYCAERK 156

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +  D+YS+  +    +RLTN+  ++    YSPD + I F S R G  Q++ M+ +G+ Q 
Sbjct: 157 DNYDVYSIPAKGGVEKRLTNSDGLDDGPEYSPDGNYIWFNSVRTGLMQIWRMKIDGTKQT 216

Query: 340 RISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVMKKDGSQERLLVE 388
           +++ D+  + + P  SP G L+ F                +   + +M  +G + + L +
Sbjct: 217 QMTFDETRNSWFPHISPNGQLVVFIAYYKGDLKPDEHLPNKNVELRIMPTNGGEPKTLTK 276

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKK 410
                  +   +WSP  + + F   +
Sbjct: 277 LFGGQGTINVNSWSPDSKYIAFVSYR 302



 Score =  123 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 54/269 (20%), Positives = 110/269 (40%), Gaps = 32/269 (11%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMI 260
            R        ++  P ++ + Q + Y +       +++ +       P+ I  G   +  
Sbjct: 38  ERTRVKEFSYLIEAPNWTYDGQWLIYNS-----GGKLWKLSPTTPAEPEEIYTGFATNCN 92

Query: 261 LAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                S +GK+  IS   ++D    IY++ +      +L   L  +    +SPD   + +
Sbjct: 93  NDHVLSFDGKQIAISHGTKEDGQSRIYTLPIGGGDP-QLITPLAPSYLHGWSPDGLYLTY 151

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            ++R+    +Y + + G  +KR++ + +     P +SP G+ I F         I  MK 
Sbjct: 152 CAERKDNYDVYSIPAKGGVEKRLT-NSDGLDDGPEYSPDGNYIWFNSVRTGLMQIWRMKI 210

Query: 379 DGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGD---------TGSKLYSIDLN-GR 426
           DG+++  +   E  N   P  SP+G+ ++F     GD            +L  +  N G 
Sbjct: 211 DGTKQTQMTFDETRNSWFPHISPNGQLVVFIAYYKGDLKPDEHLPNKNVELRIMPTNGGE 270

Query: 427 NETL---------INTPAYASDPQWVGFM 446
            +TL         IN  +++ D +++ F+
Sbjct: 271 PKTLTKLFGGQGTINVNSWSPDSKYIAFV 299



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 78/206 (37%), Gaps = 14/206 (6%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS- 291
                 +  +         R+  F  +I AP ++ +G+  +     +    ++ +   + 
Sbjct: 22  QNKTTSILEILNIETGERTRVKEFSYLIEAPNWTYDGQWLIY----NSGGKLWKLSPTTP 77

Query: 292 NATERLTNTLFINIS--ASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEA 347
              E +      N +     S D  QI     +  +G+ ++Y +   G D + I+    A
Sbjct: 78  AEPEEIYTGFATNCNNDHVLSFDGKQIAISHGTKEDGQSRIYTLPIGGGDPQLITPL--A 135

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
             +   WSP G  + +     + + +  +   G  E+ L   D     P +SP G  + F
Sbjct: 136 PSYLHGWSPDGLYLTYCAERKDNYDVYSIPAKGGVEKRLTNSDGLDDGPEYSPDGNYIWF 195

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLIN 432
           +  + G    +++ + ++G  +T + 
Sbjct: 196 NSVRTGLM--QIWRMKIDGTKQTQMT 219



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 32/99 (32%), Gaps = 12/99 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI------------LRV 239
            +  M  DG     +T    +  + P  SPN Q V +  Y   D+            LR+
Sbjct: 204 QIWRMKIDGTKQTQMTFDETRNSWFPHISPNGQLVVFIAYYKGDLKPDEHLPNKNVELRI 263

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
              +    +   ++   +  I    +S + K       +
Sbjct: 264 MPTNGGEPKTLTKLFGGQGTINVNSWSPDSKYIAFVSYR 302


>gi|86153862|ref|ZP_01072065.1| protein TolB [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|85842823|gb|EAQ60035.1| protein TolB [Campylobacter jejuni subsp. jejuni HB93-13]
          Length = 333

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 51/296 (17%), Positives = 119/296 (40%), Gaps = 13/296 (4%)

Query: 134 KDRKQIIGKKFF-SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                   + +  +    +  +AH        ++     D+    + ++ +  S   K+ 
Sbjct: 29  AGGSDKSEQTYTLNGLEQYPFLAHKSVKASVNTLGLAPVDWMDHKILIARNSSS--KKSQ 86

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D      + +      +   P++   +Q + Y T  D D   +Y  D   ++A K 
Sbjct: 87  IIMADYTLTYQKVIVDG--GLNLFPKWGNKEQTLFYYTAYDHDKPTLYRYDLNTNKASKI 144

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SP 311
           + +   M++A   S +G + L+++   +  D+Y  DL +    +LTN   I+++ ++   
Sbjct: 145 LSSG-GMVVASDVSVDGSKLLVTMAPKDQPDVYLYDLNTKNLTQLTNYSGIDVNGNFIGS 203

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           D S++VF SDR G   +++   N +  +++      +      S   D + ++     + 
Sbjct: 204 DDSKVVFVSDRLGYPNIFMQDLNSNSAEQVVFHGRNN---SAVSTYKDFLVYSSREPNQA 260

Query: 371 --FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F I +M  +    R L  +     P +S  G S++F +     +   +  ++ N
Sbjct: 261 GVFNIYLMSINSDYIRQLTANGKNLFPRFSSDGGSIVFIKYLGAQSALGVIRVNAN 316


>gi|126178726|ref|YP_001046691.1| peptidase S9B dipeptidylpeptidase IV subunit [Methanoculleus
           marisnigri JR1]
 gi|125861520|gb|ABN56709.1| peptidase S9B, dipeptidylpeptidase IV domain protein
           [Methanoculleus marisnigri JR1]
          Length = 395

 Score =  151 bits (381), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 41/298 (13%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL---FEPRFSPNQQKVAYATYD 232
           RI FVS   V       + V++RDG N   +T  R   L   F+P +SP+ +K+ + + D
Sbjct: 59  RIAFVSSDGV----HAGIRVIERDGQNPVPVTDDRSWNLFTEFDP-WSPDGKKLLFLS-D 112

Query: 233 DEDILRVYLMDTRIDRAPK-----RIGNFRSMI-LAPRFSSNGKRALIS----------- 275
               L ++ M+       +     RI     +      ++++GKR + +           
Sbjct: 113 GGRGLDLWTMNPDGTGRVRLTEGGRIVPIPGLSGYGADWNTDGKRIVYTSCLFDDAAIQE 172

Query: 276 ---VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                     DI+ +D      ++LT          + P   +I + +DR G  +++ MQ
Sbjct: 173 VNLSAIRTEADIWIMDADGGNKKQLTTD-GDARLPLWQPQGDRIAYLADRSGNREIWTMQ 231

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQERLLVE 388
           S+G+ + +++   E S  +  WSP G  IA+   S       F++ ++  DGS    L  
Sbjct: 232 SDGTGKTQVTF-SEGSVSEYSWSPDGTRIAYVVASPPGTLPEFSLRIINSDGSGSEQLTT 290

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI--NTPAYASDPQWVG 444
            +   +P WSP G  + F   +       L+ +  +G     +  + PAY    QW  
Sbjct: 291 GNRDTSPVWSPDGTRIAF---RSESRDRALWVMKSDGSGLAPLGPDNPAYMMQ-QWSP 344



 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 52/271 (19%), Positives = 106/271 (39%), Gaps = 35/271 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-- 260
                 +       P +SP+  ++A+ + D   +     +  R  + P  + + RS    
Sbjct: 37  PVVQLTNDSAFDSYPFWSPDGARIAFVSSD--GVHAGIRVIERDGQNPVPVTDDRSWNLF 94

Query: 261 --LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-------NISASYSP 311
               P +S +GK+ L        +D+++++       RLT    I          A ++ 
Sbjct: 95  TEFDP-WSPDGKKLLFLSDGGRGLDLWTMNPDGTGRVRLTEGGRIVPIPGLSGYGADWNT 153

Query: 312 DSSQIVFESD---------------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           D  +IV+ S                R  +  +++M ++G ++K+++ D +A    P+W P
Sbjct: 154 DGKRIVYTSCLFDDAAIQEVNLSAIRT-EADIWIMDADGGNKKQLTTDGDARL--PLWQP 210

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIF--SRKKDGD 413
           QGD IA+         I  M+ DG  + ++   + ++   +WSP G  + +  +      
Sbjct: 211 QGDRIAYLADRSGNREIWTMQSDGTGKTQVTFSEGSVSEYSWSPDGTRIAYVVASPPGTL 270

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               L  I+ +G     + T    + P W  
Sbjct: 271 PEFSLRIINSDGSGSEQLTTGNRDTSPVWSP 301



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 60/261 (22%), Positives = 103/261 (39%), Gaps = 31/261 (11%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQIL------FEPRFSPNQQKVAYAT--YDDEDI 236
             G     L  M+ DG     LT     +       +   ++ + +++ Y +  +DD  I
Sbjct: 111 SDGGRGLDLWTMNPDGTGRVRLTEGGRIVPIPGLSGYGADWNTDGKRIVYTSCLFDDAAI 170

Query: 237 LRVYLMDTRI---------DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             V L   R          D   K+          P +   G R      +    +I+++
Sbjct: 171 QEVNLSAIRTEADIWIMDADGGNKKQLTTDGDARLPLWQPQGDRIAYLADRSGNREIWTM 230

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQ--LYVMQSNGSDQKRISQ 343
                   ++T +       S+SPD ++I +   S      +  L ++ S+GS  ++++ 
Sbjct: 231 QSDGTGKTQVTFSEGSVSEYSWSPDGTRIAYVVASPPGTLPEFSLRIINSDGSGSEQLTT 290

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGR 402
                   PVWSP G  IAF   S ++ A+ VMK DGS    L  ++       WSP GR
Sbjct: 291 GNR--DTSPVWSPDGTRIAFRSESRDR-ALWVMKSDGSGLAPLGPDNPAYMMQQWSPDGR 347

Query: 403 SLIFSRKKDGDTGSKLYSIDL 423
           +++ S       G+ LY+I L
Sbjct: 348 TIVVS------DGNDLYAIPL 362



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 52/116 (44%), Gaps = 9/116 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +RI +V  S    + + SL +++ DG+    LT         P +SP+  ++A+ +   +
Sbjct: 257 TRIAYVVASPPGTLPEFSLRIINSDGSGSEQLTTGN--RDTSPVWSPDGTRIAFRSESRD 314

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             L V   D         +G      +  ++S +G+  ++S    +  D+Y++ L+
Sbjct: 315 RALWVMKSD---GSGLAPLGPDNPAYMMQQWSPDGRTIVVS----DGNDLYAIPLE 363


>gi|317180859|dbj|BAJ58645.1| translocation protein TolB [Helicobacter pylori F32]
          Length = 417

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 148/416 (35%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLICAIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDANYALKLHEVLANDLKTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++    V  E  +++    RL+DV   
Sbjct: 61  QHFDV--------SQNKEQGAINYAELKDKKVHLVALVSVAVENGNKIS-RLRLYDVDTE 111

Query: 137 KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
                  +    +      AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 TLKKTFDYPILSSDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLITLNSKYIRRLTVNGSNQMPRFSMDGRNIMYIKKTSQEYAMGLILLDYN 400


>gi|147797552|emb|CAN73514.1| hypothetical protein VITISV_037210 [Vitis vinifera]
          Length = 715

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 74/398 (18%), Positives = 141/398 (35%), Gaps = 63/398 (15%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
           ++++    +++T P  +  F    S G +  +     +   D   +E  L+D+       
Sbjct: 298 ILTESVVIERVT-PPGLHAFTPATSPGNKNFIAVATRRLNSDYRHIE--LFDLLS----- 349

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
                     +R++   IS   +        D ++RI +      S   K+   ++    
Sbjct: 350 --------NEFRELTRRISPQTHHFNPFISPD-STRIGYHRCRGDSNGGKSPHLLL---- 396

Query: 201 ANIRYLTPSRDQILF---EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            N++   P      F    P FSP   ++AY  +       VY+++       +    F 
Sbjct: 397 ENLKSPLPEISLFRFDGSFPSFSPGGDRIAYVEF-----PGVYVVNRDGSGRREV---FS 448

Query: 258 SMILAPRFSSNGKRALISVQKD---------EAMDIYSVDLQSNATERLTNTLFINISAS 308
            +  +  +    K  + +             + + I   D+   + ++LT     N   S
Sbjct: 449 GIAFSTAWDHKRKGVVYTSAGPTFATESTKVDIVSINVDDVDQPSYKKLTTGGENNAFPS 508

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKF 366
            SPD   I F S R G + LY+M +   ++  I +  E  + D    WSP GD I F   
Sbjct: 509 PSPDGKWIAFRSGRSGYKNLYIMDAVXGERGGIHRLTEGPWTDTMCNWSPDGDWIVFASD 568

Query: 367 S----GEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDG------- 412
                G  F + V+  +G+  R +V          P +SP G+S++F+            
Sbjct: 569 RENPGGGGFELYVIHPNGTGLRKVVHSGSAGRTNHPWFSPDGKSIVFTSDYAAVSAEPIS 628

Query: 413 -----DTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
                     ++ ++L+G     L +       P W  
Sbjct: 629 NAHHYQPYGDIFVVNLDGSGLHRLTHNSYEDGTPAWAP 666



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 66/375 (17%), Positives = 117/375 (31%), Gaps = 91/375 (24%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK---NSLCVMD-RDGAN 202
           + ++ R   + ++D  Y       G + + +    E    G ++     + V   RDG+ 
Sbjct: 206 TGSTRRLTPYGVAD--YSPAVSPSGVW-TAVASYGERGWGGEVEELSTDIYVFRTRDGSE 262

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
              +          P +  +   + +     +    +Y          +R+         
Sbjct: 263 RTKVVEHGG----WPCWV-DDSTLFFHRRGSDGWWSIYRAILTESVVIERVTPPGLHAFT 317

Query: 263 PRFSSNGK-RALISVQK--DEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQI 316
           P  S   K    ++ ++   +   I   DL SN    LT  +       +   SPDS++I
Sbjct: 318 PATSPGNKNFIAVATRRLNSDYRHIELFDLLSNEFRELTRRISPQTHHFNPFISPDSTRI 377

Query: 317 VFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +   R     GK    ++++  S    IS  +    F P +SP GD IA+ +F G    
Sbjct: 378 GYHRCRGDSNGGKSPHLLLENLKSPLPEISLFRFDGSF-PSFSPGGDRIAYVEFPG---- 432

Query: 373 IGVMKKDGSQER------------------------------------------------ 384
           + V+ +DGS  R                                                
Sbjct: 433 VYVVNRDGSGRREVFSGIAFSTAWDHKRKGVVYTSAGPTFATESTKVDIVSINVDDVDQP 492

Query: 385 ----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL----NGRNETLINTP-- 434
               L     N   P+ SP G+ + F   + G     LY +D      G    L   P  
Sbjct: 493 SYKKLTTGGENNAFPSPSPDGKWIAFRSGRSG--YKNLYIMDAVXGERGGIHRLTEGPWT 550

Query: 435 ----AYASDPQWVGF 445
                ++ D  W+ F
Sbjct: 551 DTMCNWSPDGDWIVF 565



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 43/118 (36%), Gaps = 18/118 (15%)

Query: 218 RFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRAL 273
            +SP+   + +A+  +        +Y++        K +          P FS +GK  +
Sbjct: 555 NWSPDGDWIVFASDRENPGGGGFELYVIHPNGTGLRKVVHSGSAGRTNHPWFSPDGKSIV 614

Query: 274 ISVQK--------------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            +                     DI+ V+L  +   RLT+  + + + +++P   + V
Sbjct: 615 FTSDYAAVSAEPISNAHHYQPYGDIFVVNLDGSGLHRLTHNSYEDGTPAWAPKVIRPV 672



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 65/221 (29%), Gaps = 27/221 (12%)

Query: 220 SPNQQKVAYATYD-----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           S   + + Y +                       + +R+  +     +P  S +G    +
Sbjct: 174 SLVGEXLVYVSTHEDSGVPRKSWAAVYSTHLPTGSTRRLTPYGVADYSPAVSPSGVWTAV 233

Query: 275 SVQK----DEAMDIYSVDL------QSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +          ++  S D+        +   ++           +  DS+        +G
Sbjct: 234 ASYGERGWGGEVEELSTDIYVFRTRDGSERTKVVEHGGW---PCWVDDSTLFFHRRGSDG 290

Query: 325 KEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDL---IAFTKFSGEKFAIGVMKKDG 380
              +Y      S   +R++     + F P  SP       +A  + + +   I +     
Sbjct: 291 WWSIYRAILTESVVIERVTPPGLHA-FTPATSPGNKNFIAVATRRLNSDYRHIELFDLLS 349

Query: 381 SQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           ++ R L       ++   P  SP    + + R +    G K
Sbjct: 350 NEFRELTRRISPQTHHFNPFISPDSTRIGYHRCRGDSNGGK 390



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 24/175 (13%)

Query: 269 GKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES- 320
           G+  +     +++         +YS  L + +T RLT     + S + SP        S 
Sbjct: 177 GEXLVYVSTHEDSGVPRKSWAAVYSTHLPTGSTRRLTPYGVADYSPAVSPSGVWTAVASY 236

Query: 321 -DREGKEQ-------LYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            +R    +       +YV ++ +GS++ ++ +        P W     L    + S   +
Sbjct: 237 GERGWGGEVEELSTDIYVFRTRDGSERTKVVEHG----GWPCWVDDSTLFFHRRGSDGWW 292

Query: 372 AIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGR-SLIFSRKKDGDTGSKLYSIDL 423
           +I       S   ER+     +   P  SP  +  +  + ++       +   DL
Sbjct: 293 SIYRAILTESVVIERVTPPGLHAFTPATSPGNKNFIAVATRRLNSDYRHIELFDL 347


>gi|225459633|ref|XP_002285876.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
          Length = 707

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 74/398 (18%), Positives = 141/398 (35%), Gaps = 63/398 (15%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
           ++++    +++T P  +  F    S G +  +     +   D   +E  L+D+       
Sbjct: 290 ILTESVVIERVT-PPGLHAFTPATSPGNKNFIAVATRRLNSDYRHIE--LFDLLS----- 341

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
                     +R++   IS   +        D ++RI +      S   K+   ++    
Sbjct: 342 --------NEFRELTRRISPQTHHFNPFISPD-STRIGYHRCRGDSNGGKSPHLLL---- 388

Query: 201 ANIRYLTPSRDQILF---EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            N++   P      F    P FSP   ++AY  +       VY+++       +    F 
Sbjct: 389 ENLKSPLPEISLFRFDGSFPSFSPGGDRIAYVEF-----PGVYVVNRDGSGRREV---FS 440

Query: 258 SMILAPRFSSNGKRALISVQKD---------EAMDIYSVDLQSNATERLTNTLFINISAS 308
            +  +  +    K  + +             + + I   D+   + ++LT     N   S
Sbjct: 441 GIAFSTAWDHKRKGVVYTSAGPTFATESTKVDIVSINVDDVDQPSYKKLTTGGENNAFPS 500

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKF 366
            SPD   I F S R G + LY+M +   ++  I +  E  + D    WSP GD I F   
Sbjct: 501 PSPDGKWIAFRSGRSGYKNLYIMDAVDGERGGIHRLTEGPWTDTMCNWSPDGDWIVFASD 560

Query: 367 S----GEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDG------- 412
                G  F + V+  +G+  R +V          P +SP G+S++F+            
Sbjct: 561 RENPGGGGFELYVIHPNGTGLRKVVHSGSAGRTNHPWFSPDGKSIVFTSDYAAVSAEPIS 620

Query: 413 -----DTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
                     ++ ++L+G     L +       P W  
Sbjct: 621 NAHHYQPYGDIFVVNLDGSGLHRLTHNSYEDGTPAWAP 658



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 66/375 (17%), Positives = 117/375 (31%), Gaps = 91/375 (24%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK---NSLCVMD-RDGAN 202
           + ++ R   + ++D  Y       G + + +    E    G ++     + V   RDG+ 
Sbjct: 198 TGSTRRLTPYGVAD--YSPAVSPSGVW-TAVASYGERGWGGEVEELSTDIYVFRTRDGSE 254

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
              +          P +  +   + +     +    +Y          +R+         
Sbjct: 255 RTKVVEHGG----WPCWV-DDSTLFFHRRGSDGWWSIYRAILTESVVIERVTPPGLHAFT 309

Query: 263 PRFSSNGK-RALISVQK--DEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQI 316
           P  S   K    ++ ++   +   I   DL SN    LT  +       +   SPDS++I
Sbjct: 310 PATSPGNKNFIAVATRRLNSDYRHIELFDLLSNEFRELTRRISPQTHHFNPFISPDSTRI 369

Query: 317 VFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +   R     GK    ++++  S    IS  +    F P +SP GD IA+ +F G    
Sbjct: 370 GYHRCRGDSNGGKSPHLLLENLKSPLPEISLFRFDGSF-PSFSPGGDRIAYVEFPG---- 424

Query: 373 IGVMKKDGSQER------------------------------------------------ 384
           + V+ +DGS  R                                                
Sbjct: 425 VYVVNRDGSGRREVFSGIAFSTAWDHKRKGVVYTSAGPTFATESTKVDIVSINVDDVDQP 484

Query: 385 ----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL----NGRNETLINTP-- 434
               L     N   P+ SP G+ + F   + G     LY +D      G    L   P  
Sbjct: 485 SYKKLTTGGENNAFPSPSPDGKWIAFRSGRSG--YKNLYIMDAVDGERGGIHRLTEGPWT 542

Query: 435 ----AYASDPQWVGF 445
                ++ D  W+ F
Sbjct: 543 DTMCNWSPDGDWIVF 557



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 22/160 (13%)

Query: 178 LFVSESVVSGIIKNSLCVMDR-DGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDD-- 233
                S  SG    +L +MD  DG     +             +SP+   + +A+  +  
Sbjct: 507 WIAFRSGRSGY--KNLYIMDAVDGERGGIHRLTEGPWTDTMCNWSPDGDWIVFASDRENP 564

Query: 234 -EDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQK------------- 278
                 +Y++        K +          P FS +GK  + +                
Sbjct: 565 GGGGFELYVIHPNGTGLRKVVHSGSAGRTNHPWFSPDGKSIVFTSDYAAVSAEPISNAHH 624

Query: 279 -DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                DI+ V+L  +   RLT+  + + + +++P   + V
Sbjct: 625 YQPYGDIFVVNLDGSGLHRLTHNSYEDGTPAWAPKVIRPV 664



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 65/221 (29%), Gaps = 27/221 (12%)

Query: 220 SPNQQKVAYATYD-----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           S   + + Y +                       + +R+  +     +P  S +G    +
Sbjct: 166 SLVGEDLVYVSTHEDSGVPRKSWAAVYSTHLPTGSTRRLTPYGVADYSPAVSPSGVWTAV 225

Query: 275 SVQK----DEAMDIYSVDL------QSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +          ++  S D+        +   ++           +  DS+        +G
Sbjct: 226 ASYGERGWGGEVEELSTDIYVFRTRDGSERTKVVEHGGW---PCWVDDSTLFFHRRGSDG 282

Query: 325 KEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDL---IAFTKFSGEKFAIGVMKKDG 380
              +Y      S   +R++     + F P  SP       +A  + + +   I +     
Sbjct: 283 WWSIYRAILTESVVIERVTPPGLHA-FTPATSPGNKNFIAVATRRLNSDYRHIELFDLLS 341

Query: 381 SQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           ++ R L       ++   P  SP    + + R +    G K
Sbjct: 342 NEFRELTRRISPQTHHFNPFISPDSTRIGYHRCRGDSNGGK 382



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 56/153 (36%), Gaps = 17/153 (11%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQ-------LYVMQS- 333
           +YS  L + +T RLT     + S + SP        S  +R    +       +YV ++ 
Sbjct: 191 VYSTHLPTGSTRRLTPYGVADYSPAVSPSGVWTAVASYGERGWGGEVEELSTDIYVFRTR 250

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSN 391
           +GS++ ++ +        P W     L    + S   ++I       S   ER+     +
Sbjct: 251 DGSERTKVVEHG----GWPCWVDDSTLFFHRRGSDGWWSIYRAILTESVVIERVTPPGLH 306

Query: 392 LQAPTWSPSGR-SLIFSRKKDGDTGSKLYSIDL 423
              P  SP  +  +  + ++       +   DL
Sbjct: 307 AFTPATSPGNKNFIAVATRRLNSDYRHIELFDL 339


>gi|332673925|gb|AEE70742.1| tol-Pal system beta propeller repeat protein TolB [Helicobacter
           pylori 83]
          Length = 417

 Score =  150 bits (380), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 148/416 (35%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLICAIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDANYALKLHEVLANDLKTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++    V  E  +++    RL+DV   
Sbjct: 61  QHFDV--------SQNKEQGAINYAELKDKKVHLVALVSVAVENGNKIS-RLRLYDVDTE 111

Query: 137 KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
                  +    +      AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 TLKKTFDYPILSSDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLITLNSKYIRRLTVNGSNQMPRFSMDGRNIMYIKKTPQEYAMGLILLDYN 400


>gi|261838455|gb|ACX98221.1| TonB-independent protein-uptake protein [Helicobacter pylori 51]
 gi|317177877|dbj|BAJ55666.1| translocation protein TolB [Helicobacter pylori F16]
          Length = 417

 Score =  150 bits (380), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 148/416 (35%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLICAIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDANYALKLHEVLANDLKTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++    V  E  +++    RL+DV   
Sbjct: 61  QHFDV--------SQNKEQGTINYAELKDKKVHLVALVSVAVENGNKIS-RLRLYDVDTE 111

Query: 137 KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
                  +    +      AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 TLKKTFDYPILSSDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLITLNSKYIRRLTVNGSNQMPRFSMDGRNIMYIKKTPQEYAMGLILLDYN 400


>gi|225459635|ref|XP_002285877.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]
          Length = 680

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 74/398 (18%), Positives = 141/398 (35%), Gaps = 63/398 (15%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
           ++++    +++T P  +  F    S G +  +     +   D   +E  L+D+       
Sbjct: 263 ILTESVVIERVT-PPGLHAFTPATSPGNKNFIAVATRRLNSDYRHIE--LFDLLS----- 314

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
                     +R++   IS   +        D ++RI +      S   K+   ++    
Sbjct: 315 --------NEFRELTRRISPQTHHFNPFISPD-STRIGYHRCRGDSNGGKSPHLLL---- 361

Query: 201 ANIRYLTPSRDQILF---EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            N++   P      F    P FSP   ++AY  +       VY+++       +    F 
Sbjct: 362 ENLKSPLPEISLFRFDGSFPSFSPGGDRIAYVEF-----PGVYVVNRDGSGRREV---FS 413

Query: 258 SMILAPRFSSNGKRALISVQKD---------EAMDIYSVDLQSNATERLTNTLFINISAS 308
            +  +  +    K  + +             + + I   D+   + ++LT     N   S
Sbjct: 414 GIAFSTAWDHKRKGVVYTSAGPTFATESTKVDIVSINVDDVDQPSYKKLTTGGENNAFPS 473

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKF 366
            SPD   I F S R G + LY+M +   ++  I +  E  + D    WSP GD I F   
Sbjct: 474 PSPDGKWIAFRSGRSGYKNLYIMDAVDGERGGIHRLTEGPWTDTMCNWSPDGDWIVFASD 533

Query: 367 S----GEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDG------- 412
                G  F + V+  +G+  R +V          P +SP G+S++F+            
Sbjct: 534 RENPGGGGFELYVIHPNGTGLRKVVHSGSAGRTNHPWFSPDGKSIVFTSDYAAVSAEPIS 593

Query: 413 -----DTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
                     ++ ++L+G     L +       P W  
Sbjct: 594 NAHHYQPYGDIFVVNLDGSGLHRLTHNSYEDGTPAWAP 631



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 66/375 (17%), Positives = 117/375 (31%), Gaps = 91/375 (24%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK---NSLCVMD-RDGAN 202
           + ++ R   + ++D  Y       G + + +    E    G ++     + V   RDG+ 
Sbjct: 171 TGSTRRLTPYGVAD--YSPAVSPSGVW-TAVASYGERGWGGEVEELSTDIYVFRTRDGSE 227

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
              +          P +  +   + +     +    +Y          +R+         
Sbjct: 228 RTKVVEHGG----WPCWV-DDSTLFFHRRGSDGWWSIYRAILTESVVIERVTPPGLHAFT 282

Query: 263 PRFSSNGK-RALISVQK--DEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQI 316
           P  S   K    ++ ++   +   I   DL SN    LT  +       +   SPDS++I
Sbjct: 283 PATSPGNKNFIAVATRRLNSDYRHIELFDLLSNEFRELTRRISPQTHHFNPFISPDSTRI 342

Query: 317 VFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +   R     GK    ++++  S    IS  +    F P +SP GD IA+ +F G    
Sbjct: 343 GYHRCRGDSNGGKSPHLLLENLKSPLPEISLFRFDGSF-PSFSPGGDRIAYVEFPG---- 397

Query: 373 IGVMKKDGSQER------------------------------------------------ 384
           + V+ +DGS  R                                                
Sbjct: 398 VYVVNRDGSGRREVFSGIAFSTAWDHKRKGVVYTSAGPTFATESTKVDIVSINVDDVDQP 457

Query: 385 ----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL----NGRNETLINTP-- 434
               L     N   P+ SP G+ + F   + G     LY +D      G    L   P  
Sbjct: 458 SYKKLTTGGENNAFPSPSPDGKWIAFRSGRSG--YKNLYIMDAVDGERGGIHRLTEGPWT 515

Query: 435 ----AYASDPQWVGF 445
                ++ D  W+ F
Sbjct: 516 DTMCNWSPDGDWIVF 530



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 22/160 (13%)

Query: 178 LFVSESVVSGIIKNSLCVMDR-DGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDD-- 233
                S  SG    +L +MD  DG     +             +SP+   + +A+  +  
Sbjct: 480 WIAFRSGRSGY--KNLYIMDAVDGERGGIHRLTEGPWTDTMCNWSPDGDWIVFASDRENP 537

Query: 234 -EDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQK------------- 278
                 +Y++        K +          P FS +GK  + +                
Sbjct: 538 GGGGFELYVIHPNGTGLRKVVHSGSAGRTNHPWFSPDGKSIVFTSDYAAVSAEPISNAHH 597

Query: 279 -DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                DI+ V+L  +   RLT+  + + + +++P   + V
Sbjct: 598 YQPYGDIFVVNLDGSGLHRLTHNSYEDGTPAWAPKVIRPV 637



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 65/221 (29%), Gaps = 27/221 (12%)

Query: 220 SPNQQKVAYATYD-----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           S   + + Y +                       + +R+  +     +P  S +G    +
Sbjct: 139 SLVGEDLVYVSTHEDSGVPRKSWAAVYSTHLPTGSTRRLTPYGVADYSPAVSPSGVWTAV 198

Query: 275 SVQK----DEAMDIYSVDL------QSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +          ++  S D+        +   ++           +  DS+        +G
Sbjct: 199 ASYGERGWGGEVEELSTDIYVFRTRDGSERTKVVEHGGW---PCWVDDSTLFFHRRGSDG 255

Query: 325 KEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDL---IAFTKFSGEKFAIGVMKKDG 380
              +Y      S   +R++     + F P  SP       +A  + + +   I +     
Sbjct: 256 WWSIYRAILTESVVIERVTPPGLHA-FTPATSPGNKNFIAVATRRLNSDYRHIELFDLLS 314

Query: 381 SQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           ++ R L       ++   P  SP    + + R +    G K
Sbjct: 315 NEFRELTRRISPQTHHFNPFISPDSTRIGYHRCRGDSNGGK 355



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 56/153 (36%), Gaps = 17/153 (11%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQ-------LYVMQS- 333
           +YS  L + +T RLT     + S + SP        S  +R    +       +YV ++ 
Sbjct: 164 VYSTHLPTGSTRRLTPYGVADYSPAVSPSGVWTAVASYGERGWGGEVEELSTDIYVFRTR 223

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSN 391
           +GS++ ++ +        P W     L    + S   ++I       S   ER+     +
Sbjct: 224 DGSERTKVVEHG----GWPCWVDDSTLFFHRRGSDGWWSIYRAILTESVVIERVTPPGLH 279

Query: 392 LQAPTWSPSGR-SLIFSRKKDGDTGSKLYSIDL 423
              P  SP  +  +  + ++       +   DL
Sbjct: 280 AFTPATSPGNKNFIAVATRRLNSDYRHIELFDL 312


>gi|213420647|ref|ZP_03353713.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
          Length = 162

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 5/163 (3%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M      +       +   +HA V++       +  P+ +   K+         +  +V+
Sbjct: 1   MMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+      + +   W++LG   ++ G V         V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPATAQEV-QPTAWSALGIDAVIVGLVTPNPDGSYNVAYQL 119

Query: 131 WDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
            D        +    +  +    R   HT SD++++ +TG KG
Sbjct: 120 VDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKG 162


>gi|317182380|dbj|BAJ60164.1| translocation protein TolB [Helicobacter pylori F57]
          Length = 417

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 68/416 (16%), Positives = 150/416 (36%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLIYTIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDTNYALKLHEVLANDLKTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++V   V  E  +++    RL+DV   
Sbjct: 61  QHFDV--------SQNKEQGAINYAELKDKKVHLVVLVSVAVENGNKIS-RLRLYDVDTE 111

Query: 137 KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
                  +    +      AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 TLKKTFDYPILSSDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D + 
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDNS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLITLNSKYIRRLTVNGSNQMPRFSMDGRNIMYIKKTPQEYAMGLILLDYN 400


>gi|315587015|gb|ADU41396.1| translocation protein TolB [Helicobacter pylori 35A]
          Length = 417

 Score =  150 bits (378), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 148/416 (35%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLICAIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDANYALKLHEVLANDLKTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++    V  E  +++    RL+DV   
Sbjct: 61  QHFDV--------SQNKEQGAINYAELKDKKVHLVALVSVAVENGNKIS-RLRLYDVDTE 111

Query: 137 KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
                  +    +      AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 TLKKTFDYPILSSDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKVLMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLITLNSKYIRRLTVNGSNQMPRFSMDGRNIMYIKKTPQEYAMGLILLDYN 400


>gi|94971181|ref|YP_593229.1| transcriptional regulatory protein-like [Candidatus Koribacter
           versatilis Ellin345]
 gi|94553231|gb|ABF43155.1| transcriptional regulatory protein-like protein [Candidatus
           Koribacter versatilis Ellin345]
          Length = 717

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 59/285 (20%), Positives = 102/285 (35%), Gaps = 59/285 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALI 274
            +SP+ +++ ++     +               K I +   +      P FS +GK+   
Sbjct: 287 SWSPDGKRLIFSDGKSANSPSSIFELDLETGTAKAITSPPKLWDGDSGPAFSPDGKKIAF 346

Query: 275 S-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
               +    D+Y +D       RLTN   +  S S++ D   IV+ S+R GK  L+ + +
Sbjct: 347 VRGSEGWVQDLYVMDAAGGEPTRLTNDGRMMASISWAADGKSIVYSSNRAGKFSLWRIPA 406

Query: 334 NGSDQKRISQDKEASYF------------------------------------------- 350
            G   +RI    E ++                                            
Sbjct: 407 TGGTAERIGVGTEDAFGPSVSRNGDHLAYTQGSSIYGIHRLDLKAPKSAATTILSSTQQD 466

Query: 351 -DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFS 407
             P  SP G  +AF  +      + V   DG     +   E S   +P+WSP G+ L F 
Sbjct: 467 SAPKLSPDGSRVAFQSWRSGTQEVWVAGSDGKNPERVTSFEKSLTGSPSWSPDGKQLAFD 526

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGF 445
            + +G   S +Y++ L+G     +         P ++SD +WV F
Sbjct: 527 ARPEGR--SHIYALRLDGGQPKAVTDGDFNDILPNWSSDGKWVYF 569



 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 90/244 (36%), Gaps = 12/244 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S      +P FSP+  +VA+    +    R   +       P ++ +      +P +S
Sbjct: 182 FTSYPGSQTQPAFSPDGNQVAFVWNGEGGENRNIYVKIIGSETPLQLTHDAGQDYSPTWS 241

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI---NISA-SYSPDSSQIVFESDR 322
            +G+        D    I+ V     A  ++     I     +A S+SPD  +++F   +
Sbjct: 242 PDGRSIAFLRYTDTDRGIFMVPALGGAEHKVFTPTGIVEWERNALSWSPDGKRLIFSDGK 301

Query: 323 EGK--EQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMK 377
                  ++ +       K I+   +       P +SP G  IAF + S G    + VM 
Sbjct: 302 SANSPSSIFELDLETGTAKAITSPPKLWDGDSGPAFSPDGKKIAFVRGSEGWVQDLYVMD 361

Query: 378 KDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             G +   L  D  + A  +W+  G+S+++S  + G     L+ I   G     I     
Sbjct: 362 AAGGEPTRLTNDGRMMASISWAADGKSIVYSSNRAGKF--SLWRIPATGGTAERIGVGTE 419

Query: 437 ASDP 440
            +  
Sbjct: 420 DAFG 423



 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 103/303 (33%), Gaps = 63/303 (20%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G+             + P +SP+ + +A+  Y D D  R   M   +  A  ++     +
Sbjct: 221 GSETPLQLTHDAGQDYSPTWSPDGRSIAFLRYTDTD--RGIFMVPALGGAEHKVFTPTGI 278

Query: 260 IL----APRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFI---NISASYS 310
           +     A  +S +GKR + S     +    I+ +DL++   + +T+   +   +   ++S
Sbjct: 279 VEWERNALSWSPDGKRLIFSDGKSANSPSSIFELDLETGTAKAITSPPKLWDGDSGPAFS 338

Query: 311 PDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           PD  +I F    EG  Q LYVM + G +  R++ D         W+  G  I ++     
Sbjct: 339 PDGKKIAFVRGSEGWVQDLYVMDAAGGEPTRLTNDGRM-MASISWAADGKSIVYSSNRAG 397

Query: 370 KFAIGVMKKDGS----------------------------------------------QE 383
           KF++  +   G                                                 
Sbjct: 398 KFSLWRIPATGGTAERIGVGTEDAFGPSVSRNGDHLAYTQGSSIYGIHRLDLKAPKSAAT 457

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT--PAYASDPQ 441
            +L       AP  SP G  + F   + G    +++    +G+N   + +   +    P 
Sbjct: 458 TILSSTQQDSAPKLSPDGSRVAFQSWRSGTQ--EVWVAGSDGKNPERVTSFEKSLTGSPS 515

Query: 442 WVG 444
           W  
Sbjct: 516 WSP 518



 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/228 (20%), Positives = 100/228 (43%), Gaps = 15/228 (6%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSS 267
           S  Q    P+ SP+  +VA+ ++      +   +     + P+R+ +F +S+  +P +S 
Sbjct: 461 SSTQQDSAPKLSPDGSRVAFQSWRSG--TQEVWVAGSDGKNPERVTSFEKSLTGSPSWSP 518

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +GK+     + +    IY++ L     + +T+  F +I  ++S D   + F S+R G  Q
Sbjct: 519 DGKQLAFDARPEGRSHIYALRLDGGQPKAVTDGDFNDILPNWSSDGKWVYFASNRGGAWQ 578

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LL 386
           ++   S G   +++++      F    S  G  + F K   +   +  M   G  E+ ++
Sbjct: 579 IWKAPSEGGTPQQVTKHGG---FVGQESFDGKWLYFAK--PDAVGLFRMPVSGGDEQKIM 633

Query: 387 VEDSNLQAPTWS--PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +        WS  P+G  + +  +  G    +    +L+G + T ++
Sbjct: 634 NQPPEAYWGYWSLTPNG--IYYLNETGGKMSIE--FAELDGTHPTRVH 677



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 101/253 (39%), Gaps = 19/253 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           SR+ F S    +      + V   DG N   +T     +   P +SP+ +++A+     E
Sbjct: 476 SRVAFQSWRSGT----QEVWVAGSDGKNPERVTSFEKSLTGSPSWSPDGKQLAF-DARPE 530

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               +Y +       PK + +     + P +SS+GK    +  +  A  I+    +    
Sbjct: 531 GRSHIYALRLD-GGQPKAVTDGDFNDILPNWSSDGKWVYFASNRGGAWQIWKAPSEGGTP 589

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPV 353
           +++T         S+  D   + F   +     L+ M  +G D+++I  Q  EA +    
Sbjct: 590 QQVTKHGGFVGQESF--DGKWLYFA--KPDAVGLFRMPVSGGDEQKIMNQPPEAYWGYWS 645

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRK 409
            +P G  I +   +G K +I   + DG+    +        P    + +P G++L++   
Sbjct: 646 LTPNG--IYYLNETGGKMSIEFAELDGTHPTRVHVLERGLPPFSGLSVTPDGKTLLY--N 701

Query: 410 KDGDTGSKLYSID 422
              + GS +  +D
Sbjct: 702 DRVEAGSHITLVD 714



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 18/192 (9%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLY 329
              +++            +S  T   T+        ++SPD +Q+ F  + EG     +Y
Sbjct: 157 VYFAIRATRPPVAQPGPEESYRTIPFTSYPGSQTQPAFSPDGNQVAFVWNGEGGENRNIY 216

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVE 388
           V         +++ D    Y  P WSP G  IAF +++     I ++    G++ ++   
Sbjct: 217 VKIIGSETPLQLTHDAGQDY-SPTWSPDGRSIAFLRYTDTDRGIFMVPALGGAEHKVFTP 275

Query: 389 DSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT----------P 434
              ++      +WSP G+ LIFS  K  ++ S ++ +DL       I +          P
Sbjct: 276 TGIVEWERNALSWSPDGKRLIFSDGKSANSPSSIFELDLETGTAKAITSPPKLWDGDSGP 335

Query: 435 AYASDPQWVGFM 446
           A++ D + + F+
Sbjct: 336 AFSPDGKKIAFV 347


>gi|261839858|gb|ACX99623.1| translocation protein TolB [Helicobacter pylori 52]
          Length = 417

 Score =  150 bits (378), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 137/369 (37%), Gaps = 24/369 (6%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           K+ EV++ DL+ S  F++                  + +       ++    V  E  ++
Sbjct: 48  KLHEVLANDLKTSQHFDV--------SQNKEQGAINYAELKDKKVHLVALVSVAVENGNK 99

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           +    RL+DV          +    +      AH ++  +   +      +  R++  S+
Sbjct: 100 IS-RLRLYDVDTETLKKTFDYPILSSDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSK 158

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +  GI   +L          +      +++   P+++  +Q   Y T   E    +   
Sbjct: 159 YIGPGITNIALADYTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKY 215

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +     + I + + M +    SS+G + L+S+  D   D+Y  D       ++T    
Sbjct: 216 NIQKATH-ENIASSQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPG 274

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLI 361
           I++S  +  D   + F SDR G   +Y+ +       +++  +  ++     +    D I
Sbjct: 275 IDVSGVFLEDDKSMAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSI 331

Query: 362 AFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +             F + ++  +    R L  + + Q P +S  GR++++ +K   +  
Sbjct: 332 VYVSRENLNEFGKTVFNLNLITLNSKYIRRLTVNGSNQMPRFSTDGRNIMYIKKTPQEYA 391

Query: 416 SKLYSIDLN 424
             L  +D N
Sbjct: 392 MGLILLDYN 400


>gi|268315824|ref|YP_003289543.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Rhodothermus marinus DSM 4252]
 gi|262333358|gb|ACY47155.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Rhodothermus marinus DSM 4252]
          Length = 497

 Score =  149 bits (377), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 85/206 (41%), Gaps = 15/206 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +  + +  E   R  +    I+    R            +S +G+  + + ++D
Sbjct: 289 SPDGRWLGLSHHAPEYGGRSIIYVVPIEGGTPRQVTPTGPSYLHGWSPDGRYLVYTAERD 348

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              DIY + ++     RLT+T  ++    YSPD   I F S R G  Q++ M+ +G++ +
Sbjct: 349 GDYDIYRIPVEGGEEVRLTDTPGLDDGPEYSPDGRYIYFNSVRSGTMQIWRMRPDGTEPE 408

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK----------FAIGVMKKDGSQERLLV-- 387
           +++ D   ++F P  SP G  + F  +  +             + +M   G   R++   
Sbjct: 409 QLTDDAFNNWF-PHVSPDGRWVLFLSYLPDVDPSDHPFYRLVYLRMMPAAGGSPRVVAYL 467

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKD 411
                 L   +W+P  R   F    D
Sbjct: 468 YGGQGTLNVNSWAPDSRHAAFVSNSD 493



 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 88/232 (37%), Gaps = 22/232 (9%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +  Y D     + ++D    R  K +    + I AP ++ +G+  +    +D    +Y  
Sbjct: 210 FVPYQDYIGSLLEVLDVETGR-RKVLYTSEASIQAPNWTPDGRALIY--NQDGL--LYRF 264

Query: 288 DLQSNATERLTNTLF--INISASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRIS 342
           DL +     +        N     SPD   +          G+  +YV+   G   ++++
Sbjct: 265 DLATRRPSVIPTGFATQNNNDHVLSPDGRWLGLSHHAPEYGGRSIIYVVPIEGGTPRQVT 324

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSG 401
               +      WSP G  + +T      + I  +  +G +E  L +       P +SP G
Sbjct: 325 PTGPSYLHG--WSPDGRYLVYTAERDGDYDIYRIPVEGGEEVRLTDTPGLDDGPEYSPDG 382

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-------ASDPQWVGFM 446
           R + F+  + G    +++ +  +G     +   A+       + D +WV F+
Sbjct: 383 RYIYFNSVRSGTM--QIWRMRPDGTEPEQLTDDAFNNWFPHVSPDGRWVLFL 432



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 78/208 (37%), Gaps = 16/208 (7%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + R L +S        ++ + V+  +G   R +TP+    L    +SP+ + + Y    D
Sbjct: 291 DGRWLGLSHHAPEYGGRSIIYVVPIEGGTPRQVTPTGPSYLHG--WSPDGRYLVYTAERD 348

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            D   +Y +         R+ +   +   P +S +G+    +  +   M I+ +      
Sbjct: 349 GD-YDIYRIPVEGGEEV-RLTDTPGLDDGPEYSPDGRYIYFNSVRSGTMQIWRMRPDGTE 406

Query: 294 TERLTNTLFINISASYSPDSSQIVFES-----DREGKE-----QLYVMQSNGSDQKRIS- 342
            E+LT+  F N     SPD   ++F S     D           L +M + G   + ++ 
Sbjct: 407 PEQLTDDAFNNWFPHVSPDGRWVLFLSYLPDVDPSDHPFYRLVYLRMMPAAGGSPRVVAY 466

Query: 343 -QDKEASYFDPVWSPQGDLIAFTKFSGE 369
               + +     W+P     AF   S +
Sbjct: 467 LYGGQGTLNVNSWAPDSRHAAFVSNSDK 494


>gi|91773136|ref|YP_565828.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Methanococcoides burtonii DSM 6242]
 gi|91712151|gb|ABE52078.1| TolB-like beta propeller protein [Methanococcoides burtonii DSM
           6242]
          Length = 407

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 68/297 (22%), Positives = 117/297 (39%), Gaps = 36/297 (12%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ------ILFEPR---FSPNQQKVA 227
           I++ + S V  I      +MD DG+N   LT  +          F P    +SP+  K+ 
Sbjct: 47  IVYHTLSEVGAIGNTKTWMMDIDGSNKTQLTSGKSLGPLFLISGFSPTDNPWSPDGDKLL 106

Query: 228 YATY-------DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           Y +        D    L+  +     D   K      S      ++ N  +  +    D+
Sbjct: 107 YGSLLGVEIIGDIPVFLKTDIQIMNADGTSKNKVKGSSNAEYYGWAQNTTKIFMV---DK 163

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           +  ++ ++        +T     +    + P  ++IVF SDR G   ++VM  +G+ + +
Sbjct: 164 SKKLWLLNPDGTEKVLITQGDENDSQFLWQPHGNKIVFRSDRGGYPDIWVMNYDGTGKLQ 223

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFS-----------GEKFAIGVMKKDGSQERLLV-- 387
           +S + E    D  WS  G  IA+   S               +I VM  DGS ++ L   
Sbjct: 224 LS-NSEEKELDIKWSMDGTKIAYVSPSVLNTSNLSTFFNSSHSIWVMNSDGSDKKKLTGR 282

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            D     P +SP G  + F      ++  K+  +D++G NET++   A    PQW  
Sbjct: 283 HDRWDARPEFSPDGEKIAFDTTYKNESDPKIIVMDVDGTNETVL---AKGWMPQWSP 336



 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 102/246 (41%), Gaps = 23/246 (9%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K  + +M+ DG +   +  S +   +   ++ N  K+    +  +   +++L++      
Sbjct: 124 KTDIQIMNADGTSKNKVKGSSNAEYYG--WAQNTTKI----FMVDKSKKLWLLNPDGTEK 177

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              I           +  +G + +    +    DI+ ++       +L+N+    +   +
Sbjct: 178 V-LITQGDENDSQFLWQPHGNKIVFRSDRGGYPDIWVMNYDGTGKLQLSNSEEKELDIKW 236

Query: 310 SPDSSQIVFESDR-----------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           S D ++I + S                  ++VM S+GSD+K+++   +     P +SP G
Sbjct: 237 SMDGTKIAYVSPSVLNTSNLSTFFNSSHSIWVMNSDGSDKKKLTGRHDRWDARPEFSPDG 296

Query: 359 DLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           + IAF  T  +     I VM  DG+ E +L +      P WSP G  + F+ K   ++  
Sbjct: 297 EKIAFDTTYKNESDPKIIVMDVDGTNETVLAKG---WMPQWSPMGNKIAFTGKSGNNSVV 353

Query: 417 KLYSID 422
            + ++D
Sbjct: 354 SVIALD 359



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 84/205 (40%), Gaps = 22/205 (10%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L +++ DG   + L    D+   +  + P+  K+ + + D      +++M+     
Sbjct: 163 KSKKLWLLNPDGT-EKVLITQGDENDSQFLWQPHGNKIVFRS-DRGGYPDIWVMNYDGTG 220

Query: 249 APKRIGNFRSMILAPRFSSNGKRALI-----------SVQKDEAMDIYSVDLQSNATERL 297
             + + N     L  ++S +G +              S   + +  I+ ++   +  ++L
Sbjct: 221 KLQ-LSNSEEKELDIKWSMDGTKIAYVSPSVLNTSNLSTFFNSSHSIWVMNSDGSDKKKL 279

Query: 298 T-NTLFINISASYSPDSSQIVF--ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           T      +    +SPD  +I F      E   ++ VM  +G+++  +++      + P W
Sbjct: 280 TGRHDRWDARPEFSPDGEKIAFDTTYKNESDPKIIVMDVDGTNETVLAKG-----WMPQW 334

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKD 379
           SP G+ IAFT  SG    + V+  D
Sbjct: 335 SPMGNKIAFTGKSGNNSVVSVIALD 359



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 386 LVEDS-NLQAPTWSPSGRSLIF--SRKKDGDTGSKLYSIDLNGRNETLINTP 434
           L + + +   P WSP G  +++    +      +K + +D++G N+T + + 
Sbjct: 28  LTDGTESNGFPQWSPDGEMIVYHTLSEVGAIGNTKTWMMDIDGSNKTQLTSG 79


>gi|82621714|gb|ABB86530.1| putative aminopeptidase [uncultured Bacteroidetes bacterium
           'SBI2-18 P41A3']
          Length = 354

 Score =  149 bits (377), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 70/331 (21%), Positives = 122/331 (36%), Gaps = 60/331 (18%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F   I F+S         N +   + +  +IR +T   D       +S + +K+ + + 
Sbjct: 6   IFLITISFISCKSEDKQKSNLIYEDESNFKSIRQVTFGGDNAEAY--WSFDDEKLVFQSN 63

Query: 232 DDE------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--KDEA-- 281
           + +       +  +   DT  D  P  +   +       F  + K  + +    KD+   
Sbjct: 64  NSDWGVGCDQMFIMNSDDTFDDSKPNMVSTGKGRTTCSYFLPDNKHIIYASTHLKDDNCP 123

Query: 282 -----------------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
                             DI+  DL  N   +LT+    +  A+ SP   +IVF S R G
Sbjct: 124 EVPLRKEGKYVWPIYDSFDIFISDLDGNIINQLTDEKGYDAEATVSPLGDKIVFTSTRNG 183

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------------- 369
              LY M  +G++ K+I+ D         +SP G  I F     +               
Sbjct: 184 DIDLYTMNIDGANVKQITFDL-GYDGGAFFSPDGSKIIFRSSRPKSEEQIKEYQDLLDQG 242

Query: 370 -----KFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGS--KLYSI 421
                +  + +   DG   R L +  N   +P + PSG  ++FS   + + G    LY I
Sbjct: 243 LVQPTEMELYICDSDGKNLRQLTDLGNANWSPVFHPSGEKILFSSNFESERGFPFNLYMI 302

Query: 422 DLNGRNETLINT-------PAYASDPQWVGF 445
           DL+G+N T +         P ++ D + + F
Sbjct: 303 DLDGKNLTRVTHSETFDAFPVFSRDGKKLAF 333



 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 116/293 (39%), Gaps = 52/293 (17%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDG----ANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           + +++F S +   G+  + + +M+ D     +    ++  + +      F P+ + + YA
Sbjct: 55  DEKLVFQSNNSDWGVGCDQMFIMNSDDTFDDSKPNMVSTGKGRTTCS-YFLPDNKHIIYA 113

Query: 230 TYDDED--------------------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           +   +D                       +++ D        ++ + +        S  G
Sbjct: 114 STHLKDDNCPEVPLRKEGKYVWPIYDSFDIFISDLD-GNIINQLTDEKGYDAEATVSPLG 172

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---- 325
            + + +  ++  +D+Y++++     +++T  L  +  A +SPD S+I+F S R       
Sbjct: 173 DKIVFTSTRNGDIDLYTMNIDGANVKQITFDLGYDGGAFFSPDGSKIIFRSSRPKSEEQI 232

Query: 326 ----------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--- 366
                            +LY+  S+G + ++++    A++  PV+ P G+ I F+     
Sbjct: 233 KEYQDLLDQGLVQPTEMELYICDSDGKNLRQLTDLGNANW-SPVFHPSGEKILFSSNFES 291

Query: 367 -SGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSK 417
             G  F + ++  DG     +       A P +S  G+ L FS  ++ +   +
Sbjct: 292 ERGFPFNLYMIDLDGKNLTRVTHSETFDAFPVFSRDGKKLAFSSNRNNNGTRE 344


>gi|317178571|dbj|BAJ56359.1| translocation protein TolB [Helicobacter pylori F30]
          Length = 417

 Score =  149 bits (377), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 147/416 (35%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLICTIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDANYALKLHEVLANDLKTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++    V  E  +++    RL+DV   
Sbjct: 61  QHFDV--------SQNKEQGAINYAELKDKKVHLVALVSVAVENGNKIS-RLRLYDVDTE 111

Query: 137 KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
                  +    +      AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 TLKKTFDYPILSSDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I  
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATH-ENIAG 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLITLNSKYIRRLTVNGSNQMPRFSMDGRNIMYIKKTPQEYAMGLILLDYN 400


>gi|260061950|ref|YP_003195030.1| hypothetical protein RB2501_10125 [Robiginitalea biformata
           HTCC2501]
 gi|257796359|gb|EAR17253.2| hypothetical protein RB2501_10125 [Robiginitalea biformata
           HTCC2501]
          Length = 486

 Score =  149 bits (376), Expect = 8e-34,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 18/208 (8%)

Query: 221 PNQQKVAYATY--DDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQ 277
           P+  ++A + +  DD  +  +Y +       P+++            +S++G+  L +  
Sbjct: 280 PDGSRIAISHHNPDDGGVSSIYHLPIEGSDHPEKVTGEGLGASYLHGWSADGQTMLFTGN 339

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           ++   DIY+VD+ S    +LTN   ++  + YSPD   I F S+R G  Q++ M+ +GS+
Sbjct: 340 RNGQYDIYAVDVASGKETQLTNQETLDDGSEYSPDGQWIYFNSNRTGTMQIWRMRPDGSE 399

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----------IGVMKKDGSQERLLV 387
           Q +++ D+   +F P  SP G  +    F     +          + +M  +G Q   + 
Sbjct: 400 QTQLTHDRFNDWF-PHVSPDGKQVVMISFPTSVPSGDHPFYKHCMLRIMPYEGGQPVAIA 458

Query: 388 ----EDSNLQAPTWSPSGRSLIFSRKKD 411
                   +  P+WSP  R + F    D
Sbjct: 459 YVYGGQGTINVPSWSPDSRYIAFVTNSD 486



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 73/208 (35%), Gaps = 15/208 (7%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +   + +S         +S+  +  +G++    +T       +   +S + Q + +    
Sbjct: 281 DGSRIAISHHNPDDGGVSSIYHLPIEGSDHPEKVTGEGLGASYLHGWSADGQTMLFTGNR 340

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           +     +Y +D    +  + + N  ++     +S +G+    +  +   M I+ +    +
Sbjct: 341 NGQ-YDIYAVDVASGKETQ-LTNQETLDDGSEYSPDGQWIYFNSNRTGTMQIWRMRPDGS 398

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKE----------QLYVMQSNGSDQKRIS 342
              +LT+  F +     SPD  Q+V  S                 L +M   G     I+
Sbjct: 399 EQTQLTHDRFNDWFPHVSPDGKQVVMISFPTSVPSGDHPFYKHCMLRIMPYEGGQPVAIA 458

Query: 343 --QDKEASYFDPVWSPQGDLIAFTKFSG 368
                + +   P WSP    IAF   S 
Sbjct: 459 YVYGGQGTINVPSWSPDSRYIAFVTNSD 486



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 15/183 (8%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--INISASYSPDSSQIVFE 319
           AP ++ +GK  +     +    +Y+ DL+S     L        N      PD S+I   
Sbjct: 233 APNWTPDGKTLIY----NSNGYLYTYDLESGRIGVLNTGFADSNNNDHVLLPDGSRIA-I 287

Query: 320 S----DREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           S    D  G   +Y +   GSD  ++++ +   + +   WS  G  + FT     ++ I 
Sbjct: 288 SHHNPDDGGVSSIYHLPIEGSDHPEKVTGEGLGASYLHGWSADGQTMLFTGNRNGQYDIY 347

Query: 375 VMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            +     +E  L     L   + +SP G+ + F+  + G    +++ +  +G  +T +  
Sbjct: 348 AVDVASGKETQLTNQETLDDGSEYSPDGQWIYFNSNRTGTM--QIWRMRPDGSEQTQLTH 405

Query: 434 PAY 436
             +
Sbjct: 406 DRF 408


>gi|188527910|ref|YP_001910597.1| translocation protein TolB [Helicobacter pylori Shi470]
 gi|188144150|gb|ACD48567.1| translocation protein TolB [Helicobacter pylori Shi470]
 gi|308063912|gb|ADO05799.1| translocation protein TolB [Helicobacter pylori Sat464]
          Length = 417

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 66/416 (15%), Positives = 148/416 (35%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLICTIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDANYALKLHEVLANDLRTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++    V  E  +++    +L+DV   
Sbjct: 61  QHFDV--------SQNKEQGAINYAELKDKKVHLVALVSVAVENGNKIS-RLKLYDVDTE 111

Query: 137 KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
                  +    +      AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 TLKKTFDYPILSSDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPIILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLITLNSKYIRRLTVNGSNQMPRFSMDGRNIMYIKKTPQEYAMGLILLDYN 400


>gi|325110069|ref|YP_004271137.1| peptidase M28 [Planctomyces brasiliensis DSM 5305]
 gi|324970337|gb|ADY61115.1| peptidase M28 [Planctomyces brasiliensis DSM 5305]
          Length = 1051

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 59/280 (21%), Positives = 108/280 (38%), Gaps = 56/280 (20%)

Query: 219 FSPNQQKVAYATYDDED--ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-- 274
           FS +  ++ + +  +      ++Y++D       +RI              +G+R L   
Sbjct: 85  FSADGDELVFQSEREPGNPFFQIYVLDLETGDE-ERISPGVGKTTCGWIHPDGERVLFAS 143

Query: 275 --------------------------SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                                     S   D   ++++ + ++    +LTN L  +   S
Sbjct: 144 THQDKEAKAKQKQELDAREAGEQKRYSWDYDPTYELFAYNRKTKQYTQLTNELGYDAEGS 203

Query: 309 YSPDSSQIVFESDREGKEQ-------------------LYVMQSNGSDQKRISQDKEASY 349
           YSPD S I F S+R   E+                   +YVM ++GS+ ++++ D     
Sbjct: 204 YSPDGSLIAFASNRGAYERELTAEEKEQLERDPAAFMEIYVMNADGSNVRQLT-DVFGYD 262

Query: 350 FDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIF 406
             P +SP G  I + +F   G    I  M  DGS  R L +   +  AP + PSG  L+F
Sbjct: 263 GGPFFSPDGKRICWRRFDKHGATAEIMTMNVDGSDVRQLTDWQVMSWAPFYHPSGEYLVF 322

Query: 407 SRKKDGDTGSKLYSIDLNGR--NETLINTPAYASDPQWVG 444
           +  + G +  +LY +  +G+     + N   +   P +  
Sbjct: 323 TTNRHGFSNFELYLVAADGQQDPIRVTNADGFDGLPAFSP 362



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 83/249 (33%), Gaps = 55/249 (22%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTNTLFIN 304
             P+++           FS++G   +   ++   +    IY +DL++   ER++  +   
Sbjct: 68  SNPRQLTFAGRRSGEGYFSADGDELVFQSEREPGNPFFQIYVLDLETGDEERISPGVGKT 127

Query: 305 ISASYSPDSSQIVFES----------------------------DREGKEQLYVMQSNGS 336
                 PD  +++F S                            D +   +L+       
Sbjct: 128 TCGWIHPDGERVLFASTHQDKEAKAKQKQELDAREAGEQKRYSWDYDPTYELFAYNRKTK 187

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------------------FAIGVMK 377
              +++ +      +  +SP G LIAF    G                       I VM 
Sbjct: 188 QYTQLTNEL-GYDAEGSYSPDGSLIAFASNRGAYERELTAEEKEQLERDPAAFMEIYVMN 246

Query: 378 KDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            DGS  R L +       P +SP G+ + + R       +++ +++++G +   +    +
Sbjct: 247 ADGSNVRQLTDVFGYDGGPFFSPDGKRICWRRFDKHGATAEIMTMNVDGSDVRQLTD--W 304

Query: 437 ASDPQWVGF 445
                W  F
Sbjct: 305 QVM-SWAPF 312



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 41/93 (44%), Gaps = 2/93 (2%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAP 250
            +  M+ DG+++R LT  +  + + P + P+ + + + T         +YL+     + P
Sbjct: 287 EIMTMNVDGSDVRQLTDWQ-VMSWAPFYHPSGEYLVFTTNRHGFSNFELYLVAADGQQDP 345

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            R+ N       P FS +G   + +  + +A  
Sbjct: 346 IRVTNADGFDGLPAFSPDGNTLVWTSNRTDAKQ 378



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 19/58 (32%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           S    V  +   G     L ++  DG        + D     P FSP+   + + +  
Sbjct: 316 SGEYLVFTTNRHGFSNFELYLVAADGQQDPIRVTNADGFDGLPAFSPDGNTLVWTSNR 373


>gi|296123962|ref|YP_003631740.1| hypothetical protein Plim_3729 [Planctomyces limnophilus DSM 3776]
 gi|296016302|gb|ADG69541.1| WD40 domain protein beta Propeller [Planctomyces limnophilus DSM
           3776]
          Length = 354

 Score =  149 bits (376), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 120/302 (39%), Gaps = 50/302 (16%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G +     +       G     + V   D    R L+  R +      F+P+Q
Sbjct: 56  EGYFSPDGQWIVYQAYPV-----GYPFYQIYVQKLDEKTPRLLSTGRGRTTCA-YFTPDQ 109

Query: 224 QKVAYAT---------------------------YDDEDILRVYLMDTRIDRAPKRIGNF 256
           +++ +A+                           +D +  + +Y ++       +R+ + 
Sbjct: 110 KRILFASAHTDPAIDLTEKKARDEAAQGGRRRYQWDFDPHMDLYTINFDGTGM-QRLTDT 168

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                   +S++GK+ + +  +D   D+Y ++   +   +LTNT   +    +SPD   +
Sbjct: 169 PGYDAEGSYSADGKQIVFTSNRDGDADLYLMNADGSNIRQLTNTPGYDGGPFFSPDGQWV 228

Query: 317 VFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----- 369
           +F SDRE +   QLY +  +G  + +++++ +   + P + P G  + +++         
Sbjct: 229 IFRSDREKEHMLQLYAISVDGKHEVQLTKNLDEVNWCPYFHPDGKSLIWSRADYSKGPAS 288

Query: 370 -KFAIGVMKKDGSQ--------ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            KF +  M  + +          ++   D+    P +SP G+ L+++  +  D  S+L+ 
Sbjct: 289 AKFKLWWMPIETTSTTFTAGTPRQITFGDATDVLPVFSPDGKQLLWTSTRGSDATSQLWL 348

Query: 421 ID 422
            D
Sbjct: 349 AD 350



 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 95/249 (38%), Gaps = 25/249 (10%)

Query: 205 YLTPSRDQILFEPR-----FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           +L+  R      PR     FSP+ Q + Y  Y          +    ++ P+ +   R  
Sbjct: 40  FLSNQRQVSFGLPRAGEGYFSPDGQWIVYQAYPVGYPFYQIYVQKLDEKTPRLLSTGRGR 99

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                F+ + KR L +    +     ++D        LT     + +A       +  ++
Sbjct: 100 TTCAYFTPDQKRILFASAHTD----PAID--------LTEKKARDEAAQ----GGRRRYQ 143

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            D +    LY +  +G+  +R++ D      +  +S  G  I FT        + +M  D
Sbjct: 144 WDFDPHMDLYTINFDGTGMQRLT-DTPGYDAEGSYSADGKQIVFTSNRDGDADLYLMNAD 202

Query: 380 GSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           GS  R L         P +SP G+ +IF   ++ +   +LY+I ++G++E  +       
Sbjct: 203 GSNIRQLTNTPGYDGGPFFSPDGQWVIFRSDREKEHMLQLYAISVDGKHEVQLTKNLDEV 262

Query: 439 DPQWVGFMD 447
           +  W  +  
Sbjct: 263 N--WCPYFH 269


>gi|222148505|ref|YP_002549462.1| periplasmic component of the Tol biopolymer transport system
           [Agrobacterium vitis S4]
 gi|221735491|gb|ACM36454.1| periplasmic component of the Tol biopolymer transport system
           [Agrobacterium vitis S4]
          Length = 277

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 85/202 (42%), Gaps = 15/202 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ Q +A     +     +Y++  +     +   N  S      +S +G+R      +D
Sbjct: 74  SPDGQWLAICDKVEHGKTCLYILPAKGGTPIQITENLPSYWHG--WSPDGQRVCYCGIRD 131

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +  DIY++ +  +  +RLT+    N    +S D   I F S R G  Q++ ++ +G D +
Sbjct: 132 QVFDIYTISVDGSDEQRLTHGEGRNDGPDWSADGEWIYFNSSRSGTMQIWRIRPDGRDVQ 191

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVE--- 388
           R++ D +  +F P   P    + F  +  + F         + +M  DG     L E   
Sbjct: 192 RLTDDGQGDWF-PHPCPNNRKLVFISYDADVFDHPRDLHVRMRLMDMDGGNVETLFELFG 250

Query: 389 -DSNLQAPTWSPSGRSLIFSRK 409
               +  P+WSP G+   + R 
Sbjct: 251 GQGTINVPSWSPDGQEFAYVRY 272



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 85/217 (39%), Gaps = 19/217 (8%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS- 291
               + +Y ++TR     + +     ++ AP +S +G+  +     ++   +Y + L   
Sbjct: 1   MRSSVEIYNIETR---QSRIVWQTERLVEAPNWSRDGQFLIF----NDDGLMYRLPLVGQ 53

Query: 292 NATERLTNTLFI--NISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEAS 348
           +  E++        N     SPD   +      E GK  LY++ + G    +I+++  + 
Sbjct: 54  SVPEKIDTGFATQCNNDHGLSPDGQWLAICDKVEHGKTCLYILPAKGGTPIQITENLPSY 113

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFS 407
           +    WSP G  + +     + F I  +  DGS E+ L         P WS  G  + F+
Sbjct: 114 WHG--WSPDGQRVCYCGIRDQVFDIYTISVDGSDEQRLTHGEGRNDGPDWSADGEWIYFN 171

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             + G    +++ I  +GR+   +          W  
Sbjct: 172 SSRSGTM--QIWRIRPDGRDVQRLTDDGQ---GDWFP 203



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 75/189 (39%), Gaps = 14/189 (7%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  L ++   G     +T   +   +   +SP+ Q+V Y    D  +  +Y +     
Sbjct: 88  HGKTCLYILPAKGGTPIQITE--NLPSYWHGWSPDGQRVCYCGIRD-QVFDIYTISVD-G 143

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              +R+ +       P +S++G+    +  +   M I+ +       +RLT+    +   
Sbjct: 144 SDEQRLTHGEGRNDGPDWSADGEWIYFNSSRSGTMQIWRIRPDGRDVQRLTDDGQGDWFP 203

Query: 308 SYSPDSSQIVFESD--------REGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQ 357
              P++ ++VF S         R+   ++ +M  +G + + +      + +   P WSP 
Sbjct: 204 HPCPNNRKLVFISYDADVFDHPRDLHVRMRLMDMDGGNVETLFELFGGQGTINVPSWSPD 263

Query: 358 GDLIAFTKF 366
           G   A+ ++
Sbjct: 264 GQEFAYVRY 272



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 66/170 (38%), Gaps = 16/170 (9%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             ++++  +  +  T  +  + ++S D   ++F  D      +Y +   G          
Sbjct: 7   IYNIETRQSRIVWQTERLVEAPNWSRDGQFLIFNDD----GLMYRLPLVGQSVPEKIDTG 62

Query: 346 EASY--FDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            A+    D   SP G  +A   K    K  + ++   G     + E+       WSP G+
Sbjct: 63  FATQCNNDHGLSPDGQWLAICDKVEHGKTCLYILPAKGGTPIQITENLPSYWHGWSPDGQ 122

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
            + +   +  D    +Y+I ++G +E  +         P +++D +W+ F
Sbjct: 123 RVCYCGIR--DQVFDIYTISVDGSDEQRLTHGEGRNDGPDWSADGEWIYF 170


>gi|297845140|ref|XP_002890451.1| hypothetical protein ARALYDRAFT_472405 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336293|gb|EFH66710.1| hypothetical protein ARALYDRAFT_472405 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 703

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 71/384 (18%), Positives = 129/384 (33%), Gaps = 57/384 (14%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
            P  +  F    S      +     + G +   VE  L+D+  + + I      SP S  
Sbjct: 296 TPPGLHAFTPATSPNNNNFIAVATRRPGSEIRHVE--LFDL-KKNEFIELTRLVSPKSQH 352

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
                  D         +GD   R    +         N L +   DGA           
Sbjct: 353 FNPFLSPDSSRVGYHSCRGDATGRKTPRNLLQSLKTTSNDLSLFRFDGA----------- 401

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
               P  SP   + A+ ++       V+++        + +     M     +       
Sbjct: 402 ---FPSISPEGDRFAFVSFTG-----VFVVKPDGSGLRQLL---PQMGFGTVWDPIRHGI 450

Query: 273 LISVQKD------EAMDIYSVDLQ----SNATERLTNTLFINISASYSPDSSQIVFESDR 322
           + +            +DI ++++     S A ++LT T   N     SPD  +IVF S R
Sbjct: 451 VYTSSGPALAPGKSQIDILAINVDAPNPSTAVKKLTTTGENNAFPWPSPDGKRIVFRSSR 510

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEK----FAIGVM 376
            G + LY+M +   +   + +    ++ D +  WSP G+ I F             I V+
Sbjct: 511 SGTKNLYIMDAEKGESGGLFRLTNGNWNDTIATWSPDGNWIVFASNREFPGTLLMNIYVV 570

Query: 377 KKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTG------------SKLYSI 421
             DG+  R L           P +SP  + ++F+    G +             S+++++
Sbjct: 571 HPDGTGLRKLAQNLTGGVSMHPMFSPDSKRIVFTTIYAGISAEQIGNPHFNVPSSEIFTV 630

Query: 422 DLNGRNETLINTPA-YASDPQWVG 444
           +L+G   T +   +     P W  
Sbjct: 631 NLDGSGMTRLTHNSVEDGPPMWFP 654



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 91/287 (31%), Gaps = 50/287 (17%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS---PNQQKVAYATYDDEDIL 237
           S    S   ++ L        N  + +PS   I   P  S   P    + Y T  D    
Sbjct: 54  SHRPPSPADEHRLTDAKSVNFNGHFASPSPALISLLPNKSQIQPQDLHLIYVTERDGTPS 113

Query: 238 RVY--LMDTRIDRAPKRIG----------NFRSMILAPRFSSNGKRALISVQKDE----- 280
             Y  + D +     +             N  SM   P  +S+    +     +      
Sbjct: 114 LYYDVVHDDKSGSRVQVPLFSGEEQQSGMNVNSMKDTPVLTSD--YLVYVSTHENPGKPM 171

Query: 281 --AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-----------DREGKEQ 327
                +YS +LQ+ +T RLT     + S + SP        S           ++E    
Sbjct: 172 ASWAAVYSTELQTKSTRRLTPPGIADFSPAVSPSGKWTAVASYGEKGWTWSLVEKEISSD 231

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI---GVMKKDGSQER 384
           +YV  +     +R+   ++  +  P W      + F + S + +      ++ K G+   
Sbjct: 232 IYVFLTRDG-TQRVKVVEQGGW--PRWVDDST-LYFHRKSDDGWICVYRAIIPKTGAVTT 287

Query: 385 LLVEDSNLQAP---TWSP-----SGRSLIFSRKKDGDTGSKLYSIDL 423
             V    +  P    ++P     +   +  + ++ G     +   DL
Sbjct: 288 KTVTIQRVTPPGLHAFTPATSPNNNNFIAVATRRPGSEIRHVELFDL 334


>gi|218258596|ref|ZP_03474939.1| hypothetical protein PRABACTJOHN_00594 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225366|gb|EEC98016.1| hypothetical protein PRABACTJOHN_00594 [Parabacteroides johnsonii
           DSM 18315]
          Length = 302

 Score =  149 bits (375), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 81/207 (39%), Gaps = 16/207 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            + + +++A +    ED              P+ I       L   +S +G++      +
Sbjct: 90  IAADGKQIAISHGTKEDGKSRIYTLPMQGGTPRLITPIAPSYLH-GWSPDGRQLAYCADR 148

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
               DIY + ++     RLT    ++    YSP    I F S R G  Q++ M+ +GS+Q
Sbjct: 149 KGNYDIYVIPVEGGEEIRLTTAEGLDDGPEYSPCGEYIWFNSVRTGLMQVWRMKKDGSEQ 208

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVMKKDGSQERLLV 387
            +++ D+  + + P  SP G  + F                +   + +M   G + + LV
Sbjct: 209 TQMTFDETRNSWFPHISPDGKSVIFITYYKGDLEPEQHLPNKNVELRIMPATGGEPKTLV 268

Query: 388 E----DSNLQAPTWSPSGRSLIFSRKK 410
           +       +   +W+P  R + F   +
Sbjct: 269 KLFGGQGTINVNSWAPDSRRVAFVSYR 295



 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 16/244 (6%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--IL 261
           R +       +  P ++P+ + + Y +       ++Y +       P+ I    +     
Sbjct: 32  RTVVKEFPYRIEAPNWTPDGRWLVYNS-----GGKLYKLSPDSPGEPEMINTGFATRCNN 86

Query: 262 APRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
               +++GK+  IS   ++D    IY++ +Q      +T  +  +    +SPD  Q+ + 
Sbjct: 87  DHVIAADGKQIAISHGTKEDGKSRIYTLPMQGGTPRLIT-PIAPSYLHGWSPDGRQLAYC 145

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +DR+G   +YV+   G ++ R++   E     P +SP G+ I F         +  MKKD
Sbjct: 146 ADRKGNYDIYVIPVEGGEEIRLTT-AEGLDDGPEYSPCGEYIWFNSVRTGLMQVWRMKKD 204

Query: 380 GSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           GS++  +   E  N   P  SP G+S+IF     GD   + +  +   +N  L   PA  
Sbjct: 205 GSEQTQMTFDETRNSWFPHISPDGKSVIFITYYKGDLEPEQHLPN---KNVELRIMPATG 261

Query: 438 SDPQ 441
            +P+
Sbjct: 262 GEPK 265



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 82/210 (39%), Gaps = 14/210 (6%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           A+     +  +  +    +     +  F   I AP ++ +G+  +     +    +Y + 
Sbjct: 11  ASAQQNGVTSILEVLDVTNGRRTVVKEFPYRIEAPNWTPDGRWLVY----NSGGKLYKLS 66

Query: 289 LQSNATERLTNTLFI---NISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQ 343
             S     + NT F    N     + D  QI     +  +GK ++Y +   G   + I+ 
Sbjct: 67  PDSPGEPEMINTGFATRCNNDHVIAADGKQIAISHGTKEDGKSRIYTLPMQGGTPRLITP 126

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGR 402
              A  +   WSP G  +A+       + I V+  +G +E RL   +     P +SP G 
Sbjct: 127 I--APSYLHGWSPDGRQLAYCADRKGNYDIYVIPVEGGEEIRLTTAEGLDDGPEYSPCGE 184

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            + F+  + G    +++ +  +G  +T + 
Sbjct: 185 YIWFNSVRTGLM--QVWRMKKDGSEQTQMT 212



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 52/154 (33%), Gaps = 18/154 (11%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V+  +G     LT   + +   P +SP  + + + +     +++V+ M     
Sbjct: 149 KGNYDIYVIPVEGGEEIRLTT-AEGLDDGPEYSPCGEYIWFNSVRTG-LMQVWRMKKDGS 206

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATER 296
              +   +       P  S +GK  +                   +++  +       + 
Sbjct: 207 EQTQMTFDETRNSWFPHISPDGKSVIFITYYKGDLEPEQHLPNKNVELRIMPATGGEPKT 266

Query: 297 LTNTLF----INISASYSPDSSQIVFESDREGKE 326
           L         IN++ S++PDS ++ F S R    
Sbjct: 267 LVKLFGGQGTINVN-SWAPDSRRVAFVSYRLSSP 299


>gi|317012904|gb|ADU83512.1| translocation protein TolB [Helicobacter pylori Lithuania75]
          Length = 417

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 149/416 (35%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLIYTIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDANYALKLHEVLANDLKTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++    V  E  +++    +L+DV   
Sbjct: 61  QHFDV--------SQNKDQGAINYAELKDKKVHLVALVSVAVENGNKIS-RLKLYDVDTG 111

Query: 137 KQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
                  +   S   +   AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 TLKKTFDYPIVSLDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLITLNSKYIRRLTVNGSNQMPRFSTDGRNIMYIKKTPQEYAMGLILLDYN 400


>gi|15612120|ref|NP_223772.1| translocation protein TolB [Helicobacter pylori J99]
 gi|32699722|sp|Q9ZK86|TOLB_HELPJ RecName: Full=Protein tolB; Flags: Precursor
 gi|4155646|gb|AAD06634.1| putative TONB-INDEPENDENT PROTEIN-UPTAKE PROTEIN [Helicobacter
           pylori J99]
          Length = 417

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 149/416 (35%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLIYAIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDANYALKLHEVLANDLKTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++    V  E  +++    +L+DV   
Sbjct: 61  QHFDV--------SQNKEQGAINYAELKDKKVHLVALVSVAVENGNKIS-RLKLYDVDTG 111

Query: 137 KQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
                  +   S   +   AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 TLKKTFDYPIVSLDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGEKTPMILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLIALNSKYIRRLTVNGSNQMPRFSMDGRNIMYIKKTSQEYAMGLILLDYN 400


>gi|145638707|ref|ZP_01794316.1| translocation protein TolB precursor [Haemophilus influenzae
           PittII]
 gi|145272302|gb|EDK12210.1| translocation protein TolB precursor [Haemophilus influenzae
           PittII]
          Length = 189

 Score =  148 bits (374), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 80/188 (42%), Gaps = 10/188 (5%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           +K  + +  +++           V++  +        IA   FV        +S++V+ D
Sbjct: 4   LKRLVSVFAIVLAVGSNAFAGDEVRIVIDEGVDGARPIAVLPFVG--SAPEDISKIVADD 61

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L+ S  FN I+     Q  T+   +   + W+++G   +V G+V+  G     + ++L D
Sbjct: 62  LRNSGKFNPIAVSQMPQHPTSVAEV-NPEAWSNIGIDAIVIGQVVPSGNG-YSITYQLID 119

Query: 133 VKD-----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                      ++   +  +    R  AHT+SD++++ +T  +G F +RI +V +    G
Sbjct: 120 TVGASGTPGAVLMQNSYTVTNKWLRYGAHTVSDEVFEKLTAIRGAFRTRIAYVVQKN-GG 178

Query: 188 IIKNSLCV 195
                + V
Sbjct: 179 SQPYEVRV 186


>gi|210135286|ref|YP_002301725.1| translocation protein TolB [Helicobacter pylori P12]
 gi|210133254|gb|ACJ08245.1| translocation protein TolB [Helicobacter pylori P12]
          Length = 417

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 138/369 (37%), Gaps = 24/369 (6%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           K+ EV++ DL+ S  F++                  + +       ++    V  E  ++
Sbjct: 48  KLHEVLANDLKTSQHFDV--------SQNKDQGAINYAELKDKKVHLVALVSVAVENGNK 99

Query: 124 LRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           +    +L+DV          +   S   +   AH ++  +   +      +  R++  S+
Sbjct: 100 IS-RLKLYDVDTGTLKKTFDYPIVSLDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSK 158

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +  GI   +L          +      +++   P+++  +Q   Y T   E    +   
Sbjct: 159 YIGPGITNIALADYTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKY 215

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +     + I + + M +    SS+G + L+S+  D   D+Y  D       ++T    
Sbjct: 216 NIQKATH-ENIASSQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPG 274

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLI 361
           I++S  +  D   + F SDR G   +Y+ +       +++  +  ++     +    D I
Sbjct: 275 IDVSGVFLEDDKSMAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSI 331

Query: 362 AFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +             F + ++  +    R L  + + Q P +S  GR++++ +K   +  
Sbjct: 332 VYVSRENLNEFGKTVFNLNLITLNSKYIRRLTVNGSNQMPRFSTDGRNIMYIKKTPQEYA 391

Query: 416 SKLYSIDLN 424
             L  +D N
Sbjct: 392 MGLILLDYN 400


>gi|317014513|gb|ADU81949.1| translocation protein TolB [Helicobacter pylori Gambia94/24]
          Length = 417

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 149/416 (35%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLIYAIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDANYALKLHEVLANDLKTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++    V  E  +++    +L+DV   
Sbjct: 61  QHFDV--------SQNKEQGAINYAELKDKKVHLVALVSVAVENGNKIS-RLKLYDVDTG 111

Query: 137 KQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
                  +   S   +   AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 TLKKTFDYPIVSLDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLITLNSKYIRRLTVNGSNQMPRFSMDGRNIMYIKKTPQEYAMGLILLDYN 400


>gi|15645740|ref|NP_207917.1| translocation protein TolB [Helicobacter pylori 26695]
 gi|32699689|sp|O25751|TOLB_HELPY RecName: Full=Protein tolB; Flags: Precursor
 gi|2314279|gb|AAD08170.1| colicin tolerance-like protein (tolB) [Helicobacter pylori 26695]
          Length = 417

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 138/369 (37%), Gaps = 24/369 (6%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           K+ EV++ DL+ S  F++                  + +       ++    V  E  ++
Sbjct: 48  KLHEVLANDLKTSQHFDV--------SQNKDQGAINYAELKDKKVHLVALVSVAVENGNK 99

Query: 124 LRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           +    +L+DV          +   S   +   AH ++  +   +      +  R++  S+
Sbjct: 100 IS-RLKLYDVDTGTLKKTFDYPIVSLDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSK 158

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +  GI   +L          +      +++   P+++  +Q   Y T   E    +   
Sbjct: 159 YIGPGITNIALADYTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKY 215

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +     + I + + M +    SS+G + L+S+  D   D+Y  D       ++T    
Sbjct: 216 NIQKATH-ENIASSQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPG 274

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLI 361
           I++S  +  D   + F SDR G   +Y+ +       +++  +  ++     +    D I
Sbjct: 275 IDVSGVFLEDDKSMAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSI 331

Query: 362 AFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +             F + ++  +    R L  + + Q P +S  GR++++ +K   +  
Sbjct: 332 VYVSRENLNEFGKTVFNLNLITLNSKYIRRLTVNGSNQMPRFSTDGRNIMYIKKTPQEYA 391

Query: 416 SKLYSIDLN 424
             L  +D N
Sbjct: 392 MGLILLDYN 400


>gi|307637796|gb|ADN80246.1| tolB protein precursor [Helicobacter pylori 908]
 gi|325996394|gb|ADZ51799.1| tolB protein precursor [Helicobacter pylori 2018]
 gi|325997982|gb|ADZ50190.1| Translocation protein [Helicobacter pylori 2017]
          Length = 417

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 149/416 (35%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLIYAIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDANYALKLHEVLANDLKTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++    V  E  +++    +L+DV   
Sbjct: 61  QHFDV--------SQNKEQGAINYAELKDKKVHLVALVSVAVENGNKIS-RLKLYDVDTG 111

Query: 137 KQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
                  +   S   +   AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 TLKKTFDYPIVSLDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLITLNSKYIRRLTVNGSNQMPRFSMDGRNIMYIKKTPQEYAMGLILLDYN 400


>gi|308183231|ref|YP_003927358.1| translocation protein TolB [Helicobacter pylori PeCan4]
 gi|308065416|gb|ADO07308.1| translocation protein TolB [Helicobacter pylori PeCan4]
          Length = 417

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 137/369 (37%), Gaps = 24/369 (6%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           K+ EV++ DL+ S  F++                  + +       ++    V  E  ++
Sbjct: 48  KLHEVLANDLKTSQHFDV--------SQNKEQGAINYAELKDKKVHLVALVSVAVENGNK 99

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           +    RL+DV          +    +      AH ++  +   +      +  R++  S+
Sbjct: 100 IS-RLRLYDVDTETLKKTFDYPILSSDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSK 158

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +  GI   +L          +      +++   P+++  +Q   Y T   E    +   
Sbjct: 159 YIGPGITNIALADYTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKY 215

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +     + I + + M +    SS+G + L+S+  D   D+Y  D       ++T    
Sbjct: 216 NIQKATH-ENIASSQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPG 274

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLI 361
           I++S  +  D   + F SDR G   +Y+ +       +++  +  ++     +    D I
Sbjct: 275 IDVSGVFLEDDKSMAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSI 331

Query: 362 AFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +             F + ++  +    R L  + + Q P +S  GR++++ +K   +  
Sbjct: 332 VYVSRENLNEFGKTVFNLNLITLNSKYIRRLTVNGSNQMPRFSMDGRNIMYIKKTPQEYA 391

Query: 416 SKLYSIDLN 424
             L  +D N
Sbjct: 392 MGLILLDYN 400


>gi|307720702|ref|YP_003891842.1| WD40 domain-containing protein beta Propeller [Sulfurimonas
           autotrophica DSM 16294]
 gi|306978795|gb|ADN08830.1| WD40 domain protein beta Propeller [Sulfurimonas autotrophica DSM
           16294]
          Length = 416

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 63/416 (15%), Positives = 168/416 (40%), Gaps = 27/416 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           MKI   L + L+G  F  +  A ++V   + +   +++        D    +  + +  D
Sbjct: 1   MKIFFSLFI-LVGLLF--ASDATIEVVKKADSLPSMAVEDASISYDDTFKLRFFKSLVAD 57

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L    +FN +++        + + +   +D +      ++  ++ ++    L +E +L++
Sbjct: 58  LNVISLFN-VNRHHRLANYNDTNVLVENKDMS-----YVLRYKMFEDDNRALNIEMKLFN 111

Query: 133 VKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
               +++  K++  +  + +  I+H ++ DI + +     ++  R +  +  +     K+
Sbjct: 112 --RDEEVFSKRYRVNKKNIYMFISHAMAYDINEFMGEPSVEWMKRKVIFARIIAP--KKS 167

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + + D   +    +      +   P+++   Q   Y T  D     +  +D +  +  K
Sbjct: 168 EIIIADYTLSYQHVIIKG--GLDIFPKWANKAQNAFYYTSLDPLKPTLKYVDIKTAK-VK 224

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            I +   M++    S +GK  L+++ ++   DIY  +  +   +R+T    I+++  +  
Sbjct: 225 NIISSDGMMVCSDVSEDGKSILLTMARNGQPDIYLYNTTTKKYKRITTYSGIDVNGQFMG 284

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           D ++I+F S R G   ++  + +    +++    +++      S QG  I +        
Sbjct: 285 D-NKIIFISSRLGYPNVFSKRLDTGIVEQMVYYGKSNSSC---SAQGQYIVYEARESSNA 340

Query: 371 -----FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                F + ++       R L      + P +S  G ++IF +     +   +  +
Sbjct: 341 FSVNTFNLHLISTKTDFIRRLTATGINEFPRFSKDGDAIIFIKNYKSQSAIGIIRL 396


>gi|217032686|ref|ZP_03438172.1| hypothetical protein HPB128_202g20 [Helicobacter pylori B128]
 gi|298735870|ref|YP_003728395.1| TolB protein [Helicobacter pylori B8]
 gi|216945616|gb|EEC24267.1| hypothetical protein HPB128_202g20 [Helicobacter pylori B128]
 gi|298355059|emb|CBI65931.1| TolB protein [Helicobacter pylori B8]
          Length = 417

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 140/369 (37%), Gaps = 24/369 (6%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           K+ EV++ DL+ S  F++               +  + +      Q++    V  E  ++
Sbjct: 48  KLHEVLANDLKTSQHFDV--------SQNKDQGVINYAELKDKKVQLVALVSVALENGNK 99

Query: 124 LRVEFRLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           +    +L+DV          +   S   +   AH ++  +   +      +  R++  S+
Sbjct: 100 IS-RLKLYDVDTGTLKKTFDYPIVSLDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSK 158

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +  GI   +L          +      +++   P+++  +Q   Y T   E    +   
Sbjct: 159 YIGPGITNIALADYTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKY 215

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +     + I + + M +    SS+G + L+S+  D   D+Y  D       ++T    
Sbjct: 216 NIQKATH-ENIASSQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPG 274

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLI 361
           I++S  +  D   + F SDR G   +Y+ +       +++  +  ++     +    D I
Sbjct: 275 IDVSGVFLEDDKSMAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSI 331

Query: 362 AFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +             F + ++  +    R L  + + Q P +S  GR++++ +K   +  
Sbjct: 332 VYVSRENLNEFGKTVFNLNLITLNSKYIRRLTVNGSNQMPRFSMDGRNIMYIKKTPQEYA 391

Query: 416 SKLYSIDLN 424
             L  +D N
Sbjct: 392 MGLILLDYN 400


>gi|254779678|ref|YP_003057784.1| translocation protein TolB [Helicobacter pylori B38]
 gi|254001590|emb|CAX29649.1| TonB-independent protein-uptake protein [Helicobacter pylori B38]
          Length = 417

 Score =  148 bits (373), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 67/416 (16%), Positives = 149/416 (35%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLISAIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDANYALKLHEVLANDLKTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++    V  E  +++    +L+DV   
Sbjct: 61  QHFDV--------SQNKDQGAINYAELKDKKVHLVALVSVALENGNKIS-RLKLYDVDTE 111

Query: 137 KQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
                  +   S   +   AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 TLKKTFDYPILSTDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D I +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSIVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLITLNSKYIRRLTVNGSNQMPRFSTDGRNIMYIKKTPQEYAMGLILLDYN 400


>gi|88859959|ref|ZP_01134598.1| hypothetical protein PTD2_18145 [Pseudoalteromonas tunicata D2]
 gi|88817953|gb|EAR27769.1| hypothetical protein PTD2_18145 [Pseudoalteromonas tunicata D2]
          Length = 1061

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 50/211 (23%), Positives = 82/211 (38%), Gaps = 25/211 (11%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +I   +   +    S +GK  +  +  D    IY++        +LT+ +   +   +SP
Sbjct: 47  KIAVEQGTWMNIDVSPDGKTIVFDLLGD----IYTMPFSGGKATQLTSDIAWQMQPRFSP 102

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKF 366
           D   I F SD +G + ++VM  +G + K ++++       P WSP GD I          
Sbjct: 103 DGKSIAFTSDADGGDNIWVMDVDGQNAKAVTKETFRLLNSPAWSPDGDFIIARKHFTASR 162

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDT 414
           S     + +  K G     L +  N Q     P +SP GR + FS             D+
Sbjct: 163 SLGAGEVWLYHKAGGNGVQLTKRENDQKDLGEPAFSPDGRYVYFSHDATPGKTFHYSKDS 222

Query: 415 GSKLYSIDL----NGRNETLINTPAYASDPQ 441
              +Y I       G  ET+I+    A  P 
Sbjct: 223 VDGIYKIKRYDRQTGEIETIISGMGGAIRPT 253



 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 94/234 (40%), Gaps = 30/234 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + + +    D     +Y M         ++ +  +  + PRFS +GK    +   D
Sbjct: 61  SPDGKTIVFDLLGD-----IYTMP-FSGGKATQLTSDIAWQMQPRFSPDGKSIAFTSDAD 114

Query: 280 EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVMQS 333
              +I+ +D+     + +T   F +  S ++SPD   I+    F + R  G  ++++   
Sbjct: 115 GGDNIWVMDVDGQNAKAVTKETFRLLNSPAWSPDGDFIIARKHFTASRSLGAGEVWLYHK 174

Query: 334 NGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVMKK 378
            G +  ++++ +       +P +SP G  + F+  +                + I    +
Sbjct: 175 AGGNGVQLTKRENDQKDLGEPAFSPDGRYVYFSHDATPGKTFHYSKDSVDGIYKIKRYDR 234

Query: 379 DGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              + E ++        PT SP G++L + ++   D  S LY  DL     T +
Sbjct: 235 QTGEIETIISGMGGAIRPTPSPDGKTLAYIKRD--DFQSSLYLYDLATGQHTKV 286



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 97/292 (33%), Gaps = 42/292 (14%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            I  E+G + +  +      +   +   +  M   G     LT S      +PRFSP+ +
Sbjct: 47  KIAVEQGTWMNIDVSPDGKTIVFDLLGDIYTMPFSGGKATQLT-SDIAWQMQPRFSPDGK 105

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD- 279
            +A+ + D +    +++MD     A         ++ +P +S +G   +     +  +  
Sbjct: 106 SIAFTS-DADGGDNIWVMDVDGQNAKAVTKETFRLLNSPAWSPDGDFIIARKHFTASRSL 164

Query: 280 EAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDR-------------E 323
            A +++          +LT   N        ++SPD   + F  D              +
Sbjct: 165 GAGEVWLYHKAGGNGVQLTKRENDQKDLGEPAFSPDGRYVYFSHDATPGKTFHYSKDSVD 224

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  ++        + + I          P  SP G  +A+ K    + ++ +      Q 
Sbjct: 225 GIYKIKRYDRQTGEIETIIS-GMGGAIRPTPSPDGKTLAYIKRDDFQSSLYLYDLATGQH 283

Query: 384 RLLVE------------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +                      W+P  + L+F        G K++ +D+
Sbjct: 284 TKVYGAMERDMQETWAIHGVYPTMAWTPDNKGLVFWA------GGKIHQVDV 329



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 73/201 (36%), Gaps = 20/201 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQ 277
            SP+ +   +         ++YL D    +      +       P FS +GK+    S Q
Sbjct: 372 ISPDGETAIFEAMG-----KIYLRDLDSGKIKPLTKSSAGFQFFPTFSRDGKQVAFVSWQ 426

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---------KEQL 328
            DE   ++ V  +S   + L       +   +SPD   +VF   R G            +
Sbjct: 427 DDEQSQLHVVSTRSGKGKTLLKEKGKFVEPVFSPDGKTVVFRKVRGGAILDPDFSLNPGI 486

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y + S G D + I +  E   F        D I +    GEK ++ ++  +  + + L E
Sbjct: 487 YKVPSTGGDAELIFKQGEQPQFGK----DNDKI-YVLGIGEKPSLSMIDLNTKKAQKLYE 541

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
                    SP  R L F+ +
Sbjct: 542 SELATEFRISPDSRYLAFAER 562



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 107/326 (32%), Gaps = 60/326 (18%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ--ILFEPRFSPNQQK 225
              GDF   I     +    +    + +  + G N   LT   +    L EP FSP+ + 
Sbjct: 146 SPDGDFI--IARKHFTASRSLGAGEVWLYHKAGGNGVQLTKRENDQKDLGEPAFSPDGRY 203

Query: 226 VAYATYDDEDILRVYLMDT-----------RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           V ++          Y  D+           R     + I +     + P  S +GK    
Sbjct: 204 VYFSHDATPGKTFHYSKDSVDGIYKIKRYDRQTGEIETIISGMGGAIRPTPSPDGKTLAY 263

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINIS-----------ASYSPDSSQIVFESDRE 323
             + D    +Y  DL +    ++   +  ++             +++PD+  +VF +   
Sbjct: 264 IKRDDFQSSLYLYDLATGQHTKVYGAMERDMQETWAIHGVYPTMAWTPDNKGLVFWA--- 320

Query: 324 GKEQLYVMQSNGSDQKRISQDKEAS----------------------YFDPVWSPQGDLI 361
              +++ +         I+   E S                        +   SP G+  
Sbjct: 321 -GGKIHQVDVKTKQASEIAFKVETSKKMQKALRFAQNIDTPEFDVKMLRNVQISPDGETA 379

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            F         I +   D  + + L +        PT+S  G+ + F   +D D  S+L+
Sbjct: 380 IFEAMG----KIYLRDLDSGKIKPLTKSSAGFQFFPTFSRDGKQVAFVSWQD-DEQSQLH 434

Query: 420 SIDL-NGRNETLINTPAYASDPQWVG 444
            +   +G+ +TL+       +P +  
Sbjct: 435 VVSTRSGKGKTLLKEKGKFVEPVFSP 460



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 61/367 (16%), Positives = 120/367 (32%), Gaps = 73/367 (19%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++G  +    +  +  A  ++ DI   +          I F S++         + VMD 
Sbjct: 71  LLGDIYTMPFSGGK--ATQLTSDIAWQMQPRFSPDGKSIAFTSDADGGDN----IWVMDV 124

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVA----YATYDDEDILRVYLMDTRIDRAPKRI- 253
           DG N + +T    ++L  P +SP+   +     +          V+L         +   
Sbjct: 125 DGQNAKAVTKETFRLLNSPAWSPDGDFIIARKHFTASRSLGAGEVWLYHKAGGNGVQLTK 184

Query: 254 -GNFRSMILAPRFSSNGKRALISV-------------QKDEAMDIYSVDLQSNATERLTN 299
             N +  +  P FS +G+    S                D    I   D Q+   E + +
Sbjct: 185 RENDQKDLGEPAFSPDGRYVYFSHDATPGKTFHYSKDSVDGIYKIKRYDRQTGEIETIIS 244

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----------SQDKEASY 349
            +   I  + SPD   + +    + +  LY+         ++          +      Y
Sbjct: 245 GMGGAIRPTPSPDGKTLAYIKRDDFQSSLYLYDLATGQHTKVYGAMERDMQETWAIHGVY 304

Query: 350 FDPVWSPQGDLIAFTKFSGEKFA------------IGVMKKDGSQERLLVEDSNLQAPTW 397
               W+P    + F  ++G K                 ++     ++ L    N+  P +
Sbjct: 305 PTMAWTPDNKGLVF--WAGGKIHQVDVKTKQASEIAFKVETSKKMQKALRFAQNIDTPEF 362

Query: 398 ----------SPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINT-------PAYASD 439
                     SP G + IF      +   K+Y  DL+ G+ + L  +       P ++ D
Sbjct: 363 DVKMLRNVQISPDGETAIF------EAMGKIYLRDLDSGKIKPLTKSSAGFQFFPTFSRD 416

Query: 440 PQWVGFM 446
            + V F+
Sbjct: 417 GKQVAFV 423



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 90/273 (32%), Gaps = 53/273 (19%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----------FRS 258
           S       P  SP+ + +AY   DD     +YL D    +  K  G              
Sbjct: 244 SGMGGAIRPTPSPDGKTLAYIKRDDFQS-SLYLYDLATGQHTKVYGAMERDMQETWAIHG 302

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--------------ERLTNTLFIN 304
           +     ++ + K  +          I+ VD+++                 + L     I+
Sbjct: 303 VYPTMAWTPDNKGLVFWA----GGKIHQVDVKTKQASEIAFKVETSKKMQKALRFAQNID 358

Query: 305 ISASY----------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
               +          SPD    +FE+      ++Y+   +    K +++      F P +
Sbjct: 359 T-PEFDVKMLRNVQISPDGETAIFEA----MGKIYLRDLDSGKIKPLTKSSAGFQFFPTF 413

Query: 355 SPQGDLIAFTK-FSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           S  G  +AF      E+  + V+    G  + LL E      P +SP G++++F + + G
Sbjct: 414 SRDGKQVAFVSWQDDEQSQLHVVSTRSGKGKTLLKEKGKFVEPVFSPDGKTVVFRKVRGG 473

Query: 413 -------DTGSKLYSIDLNGRNETLINTPAYAS 438
                       +Y +   G +  LI       
Sbjct: 474 AILDPDFSLNPGIYKVPSTGGDAELIFKQGEQP 506



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSL 404
           + ++ +   SP G  I F         I  M   G +   L  D   Q  P +SP G+S+
Sbjct: 52  QGTWMNIDVSPDGKTIVFDLLGD----IYTMPFSGGKATQLTSDIAWQMQPRFSPDGKSI 107

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
            F+   DG  G  ++ +D++G+N   +    +   + P W  
Sbjct: 108 AFTSDADG--GDNIWVMDVDGQNAKAVTKETFRLLNSPAWSP 147



 Score = 36.9 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 7/64 (10%)

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDP 440
             ++ VE         SP G++++F      D    +Y++  +G   T + +  A+   P
Sbjct: 45  DAKIAVEQGTWMNIDVSPDGKTIVF------DLLGDIYTMPFSGGKATQLTSDIAWQMQP 98

Query: 441 QWVG 444
           ++  
Sbjct: 99  RFSP 102


>gi|119469520|ref|ZP_01612424.1| hypothetical protein ATW7_06673 [Alteromonadales bacterium TW-7]
 gi|119447055|gb|EAW28325.1| hypothetical protein ATW7_06673 [Alteromonadales bacterium TW-7]
          Length = 1061

 Score =  147 bits (372), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 54/237 (22%), Positives = 95/237 (40%), Gaps = 26/237 (10%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           A+A   D+   + + +D+   +    +I   +   +    S +GK  +  +  D    IY
Sbjct: 20  AHAESTDKKDEQKWQVDSPKGQFVDAKISVEQGTWMNIDISPDGKTIVFDLLGD----IY 75

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           ++ +      +LT+ +   +   +SPD   I F SD+ G + ++VM  NG +Q  ++ + 
Sbjct: 76  TMPMSGGTATQLTSDIAWQMQPRFSPDGKHIAFTSDQGGGDNIWVMDLNGENQSAVTNET 135

Query: 346 EASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ----APT 396
                 P WSP GD +          S     + +  K G +   L +  N Q     P 
Sbjct: 136 FRLLNSPAWSPDGDFLVARKHFTASRSLGAGEVWLYHKAGGKGVQLTKRENDQKDLGEPM 195

Query: 397 WSPSGRSLIFSRK--------KDGDTGSKLYSIDL----NGRNETLINTPAYASDPQ 441
           +SP GR + FS             D+ + +Y I       G  ET+I+    A  P 
Sbjct: 196 FSPDGRYVYFSHDATPGKTFHYSKDSVAGIYKIKRYDRETGEIETIIDGMGGAIRPT 252



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 50/321 (15%), Positives = 108/321 (33%), Gaps = 50/321 (15%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILF-EPRFSPNQQK 225
              GDF   +     +    +    + +     G  ++      DQ    EP FSP+ + 
Sbjct: 145 SPDGDFL--VARKHFTASRSLGAGEVWLYHKAGGKGVQLTKRENDQKDLGEPMFSPDGRY 202

Query: 226 VAYATYDDEDILRVYLMDT-----------RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           V ++          Y  D+           R     + I +     + P  S +GK    
Sbjct: 203 VYFSHDATPGKTFHYSKDSVAGIYKIKRYDRETGEIETIIDGMGGAIRPTPSPDGKTLAY 262

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS-----------PDSSQIVF----- 318
             + D    +Y  DL +    ++ + L  ++  +++           PD+ ++VF     
Sbjct: 263 IKRDDFQTSLYLYDLSTGEHTQVYDKLERDMQETWAIHGVYPTIAWTPDNKELVFWAGGK 322

Query: 319 -----ESDREGKEQLYVMQSNGSDQK--RISQDKEASYF------DPVWSPQGDLIAFTK 365
                 +D+      + +++    Q   R +Q+ +   F      +   SP G+   F  
Sbjct: 323 IQSVDVTDKSVTPIAFKVETTKKIQPALRFTQNLDTDEFDVKMLRNVQVSPDGETAIFEA 382

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  I     +  + + L + ++     P +S  G+ ++++   D   G        
Sbjct: 383 LG----YIYKRDLESGKIKRLTKQTDHFELFPQYSRDGKKIVYTTWSDNKQGQVRVVSSR 438

Query: 424 NGRNETLINTPAYASDPQWVG 444
           +GR +T+   P    +P +  
Sbjct: 439 SGRGDTITQEPGKYVEPTFSP 459



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 53/300 (17%), Positives = 97/300 (32%), Gaps = 52/300 (17%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             S  S      +   DR+   I  +       +  P  SP+ + +AY   DD     +Y
Sbjct: 216 HYSKDSVAGIYKIKRYDRETGEIETIIDGMGGAI-RPTPSPDGKTLAYIKRDDFQT-SLY 273

Query: 241 LMDTRIDRAPKRIGNFR----------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           L D       +                 +     ++ + K  +          I SVD+ 
Sbjct: 274 LYDLSTGEHTQVYDKLERDMQETWAIHGVYPTIAWTPDNKELVFWA----GGKIQSVDVT 329

Query: 291 SNATE----------------RLTNTLFIN-------ISASYSPDSSQIVFESDREGKEQ 327
             +                  R T  L  +        +   SPD    +FE+       
Sbjct: 330 DKSVTPIAFKVETTKKIQPALRFTQNLDTDEFDVKMLRNVQVSPDGETAIFEA----LGY 385

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMK-KDGSQERL 385
           +Y         KR+++  +     P +S  G  I +T +S  K   + V+  + G  + +
Sbjct: 386 IYKRDLESGKIKRLTKQTDHFELFPQYSRDGKKIVYTTWSDNKQGQVRVVSSRSGRGDTI 445

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDG-------DTGSKLYSIDLNGRNETLINTPAYAS 438
             E      PT+SP+G+++++ +   G            +YS+   G    LI+   Y  
Sbjct: 446 TQEPGKYVEPTFSPNGKTVVYRKASGGSILNPKWSLNPGIYSVSAKGGKSELISKSGYQP 505



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 60/282 (21%), Positives = 106/282 (37%), Gaps = 40/282 (14%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD--GANIRYLTPSRDQILFEPRFSPNQQ 224
           T E      R + VS    + I +    +  RD     I+ LT   D     P++S + +
Sbjct: 358 TDEFDVKMLRNVQVSPDGETAIFEALGYIYKRDLESGKIKRLTKQTDHFELFPQYSRDGK 417

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE---- 280
           K+ Y T+ D    +V ++ +R  R    I       + P FS NGK  +           
Sbjct: 418 KIVYTTWSDNKQGQVRVVSSRSGRGDT-ITQEPGKYVEPTFSPNGKTVVYRKASGGSILN 476

Query: 281 -----AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                   IYSV  +   +E ++ + +      +  D+ + VF      K  L V++   
Sbjct: 477 PKWSLNPGIYSVSAKGGKSELISKSGY---QPQFGADNDR-VFVMSPWPKPSLSVVELES 532

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
               ++ + + A+ F    SP G+ +AF     E+F + V     S + + +   + + P
Sbjct: 533 KKVSKLYESEHATEF--RVSPDGEYLAFA----ERFKVYVTPLVESGKAINIGPKDSKFP 586

Query: 396 ------------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                       +WS     L ++       G +LY   LNG
Sbjct: 587 IEQLSVRAGESISWSADSSKLYWT------LGPELYHASLNG 622



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 81/221 (36%), Gaps = 39/221 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------------ 265
            ++P+ +++ +  +    I  V + D  +     ++   + +  A RF            
Sbjct: 307 AWTPDNKELVF--WAGGKIQSVDVTDKSVTPIAFKVETTKKIQPALRFTQNLDTDEFDVK 364

Query: 266 -------SSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIV 317
                  S +G+ A+          IY  DL+S   +RLT  T    +   YS D  +IV
Sbjct: 365 MLRNVQVSPDGETAIFEA----LGYIYKRDLESGKIKRLTKQTDHFELFPQYSRDGKKIV 420

Query: 318 FESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----- 371
           + +  + K+ Q+ V+ S       I+Q+    Y +P +SP G  + + K SG        
Sbjct: 421 YTTWSDNKQGQVRVVSSRSGRGDTITQE-PGKYVEPTFSPNGKTVVYRKASGGSILNPKW 479

Query: 372 ----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                I  +   G +  L+ +      P +      +    
Sbjct: 480 SLNPGIYSVSAKGGKSELISKSGYQ--PQFGADNDRVFVMS 518


>gi|297162553|gb|ADI12265.1| amidohydrolase [Streptomyces bingchenggensis BCW-1]
          Length = 1056

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 95/204 (46%), Gaps = 11/204 (5%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +   ++I   ++   +   S +G+  ++    D    ++++  Q     RLT+      
Sbjct: 43  TEGDTRQITVGQATNASAALSPDGRTIVM----DLLNLLWTLPAQGGEATRLTDIDKEAS 98

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              +SPD  ++V++S  +G   L++ +++GS+ +R++ + +  + +P +SP G  IA+  
Sbjct: 99  EPDFSPDGRRLVYQSYADGNFHLWLARADGSEARRLT-EGDIDHREPRFSPDGKRIAYAA 157

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +   +AI V+  D  + +     ++       P W P  ++++F+  K GD    +  +
Sbjct: 158 ETDGHYAIHVLDLDSGESKRWTSGTDATVQETQPFWRPDSKAIVFTSGK-GDAPQSVVQV 216

Query: 422 DLNGRNETLIN-TPAYASDPQWVG 444
           D +G+  TL+  T    + P    
Sbjct: 217 DADGKLTTLVTVTEGRVAGPSLSP 240



 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 82/256 (32%), Gaps = 37/256 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + +        D+L +            R+ +       P FS +G+R +    
Sbjct: 61  ALSPDGRTIV------MDLLNLLWTLPAQGGEATRLTDIDKEASEPDFSPDGRRLVYQSY 114

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D    ++      +   RLT     +    +SPD  +I + ++ +G   ++V+  +  +
Sbjct: 115 ADGNFHLWLARADGSEARRLTEGDIDHREPRFSPDGKRIAYAAETDGHYAIHVLDLDSGE 174

Query: 338 QKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVM-KKDGSQERLLV-EDSNLQ 393
            KR +   +A+     P W P    I FT   G+     V    DG    L+   +  + 
Sbjct: 175 SKRWTSGTDATVQETQPFWRPDSKAIVFTSGKGDAPQSVVQVDADGKLTTLVTVTEGRVA 234

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKL------------------------YSIDLNGRNET 429
            P+ SP G  L +        G  +                             +G+   
Sbjct: 235 GPSLSPDGTKLAYVHLTSSSAGLVVDGKVVSGDGEEVFPFAARWPSDDEVFYTADGKIRR 294

Query: 430 LINTPAYASDPQWVGF 445
              T     D   + F
Sbjct: 295 RPVTGGSVKD---IPF 307



 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 62/320 (19%), Positives = 105/320 (32%), Gaps = 73/320 (22%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVYLMDTRIDRAPK 251
           L +   DG+  R LT   D    EPRFSP+ +++AYA   D    + V  +D+   +   
Sbjct: 121 LWLARADGSEARRLTEG-DIDHREPRFSPDGKRIAYAAETDGHYAIHVLDLDSGESKRWT 179

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS-VDLQSNATERLTNTLFINISASYS 310
              +       P +  + K  + +  K +A      VD     T  +T T       S S
Sbjct: 180 SGTDATVQETQPFWRPDSKAIVFTSGKGDAPQSVVQVDADGKLTTLVTVTEGRVAGPSLS 239

Query: 311 PDSSQIVF---ESDREG-----------------------KEQLYVMQSNGSDQKRISQD 344
           PD +++ +    S   G                        +      ++G  ++R    
Sbjct: 240 PDGTKLAYVHLTSSSAGLVVDGKVVSGDGEEVFPFAARWPSDDEVFYTADGKIRRRPVTG 299

Query: 345 KEA--------------------------------SYFDPVWSPQGDLIAFTKFSGEKFA 372
                                                  P  SP G  +AF         
Sbjct: 300 GSVKDIPFAVHLTVPRVPERSAPRDFDSTAPRKVKGIVGPSLSPDGKQVAFAALGD---- 355

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431
           I V +   + + ++ + +    P W P G +L++   + G   + L+  DL +G N  L 
Sbjct: 356 IWVGRIGSTPKAVVSDGNINSDPAWHPDGSTLVYVSDRGGH-AADLWLHDLESGENRRLT 414

Query: 432 N------TPAYASDPQWVGF 445
           N       P +A D + V F
Sbjct: 415 NLQGQLFGPVFAPDGKTVAF 434



 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 85/241 (35%), Gaps = 30/241 (12%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           S   I  +P + P+   + Y +        ++L D       +R+ N +  +  P F+ +
Sbjct: 370 SDGNINSDPAWHPDGSTLVYVSDRGGHAADLWLHDLESGEN-RRLTNLQGQLFGPVFAPD 428

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ-------IVFESD 321
           GK    S     +  + +VD+ S A   +T        A++S D ++             
Sbjct: 429 GKTVAFSFW---SAIVQAVDVASGAVRTVTPVGAN--RATFSADGTKLSCAALMPATPRY 483

Query: 322 REGKEQLYVMQSNGSDQ---KRISQDKEAS--YFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           REG  ++  +     +    + +     A+     PV SP G   A+    G    +  +
Sbjct: 484 REGSNRILTIDLTSGETHYDEPVPGKSLANRIDAGPVHSPDGTYTAYVL--GGTVHLSAL 541

Query: 377 KKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              G      R L        P+WS  G+SL++          +L   D+     T + T
Sbjct: 542 DSAGRPTGAARKL-NGETADCPSWSADGQSLLYLSN------GRLRLADVRTGRATTVPT 594

Query: 434 P 434
            
Sbjct: 595 G 595



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 59/345 (17%), Positives = 113/345 (32%), Gaps = 91/345 (26%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  +   G    S+  +D DG  +  L    +  +  P  SP+  K+AY          V
Sbjct: 200 IVFTSGKGDAPQSVVQVDADGK-LTTLVTVTEGRVAGPSLSPDGTKLAYVHLTSSSAGLV 258

Query: 240 ---------------------------YLMDTRIDRAPKRIGNFRSMILA---------- 262
                                      Y  D +I R P   G+ + +  A          
Sbjct: 259 VDGKVVSGDGEEVFPFAARWPSDDEVFYTADGKIRRRPVTGGSVKDIPFAVHLTVPRVPE 318

Query: 263 --------------------PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                               P  S +GK+   +   D       V    +  + + +   
Sbjct: 319 RSAPRDFDSTAPRKVKGIVGPSLSPDGKQVAFAALGD-----IWVGRIGSTPKAVVSDGN 373

Query: 303 INISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           IN   ++ PD S +V+ SDR G    L++      + +R++ + +   F PV++P G  +
Sbjct: 374 INSDPAWHPDGSTLVYVSDRGGHAADLWLHDLESGENRRLT-NLQGQLFGPVFAPDGKTV 432

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS-------RKKDGDT 414
           AF+ +S     +  +       R +      +A T+S  G  L  +       R ++G  
Sbjct: 433 AFSFWSA---IVQAVDVASGAVRTVTPVGANRA-TFSADGTKLSCAALMPATPRYREGSN 488

Query: 415 GSKLYSIDLNGRNE-------------TLINTPAYASDPQWVGFM 446
             ++ +IDL                   +   P ++ D  +  ++
Sbjct: 489 --RILTIDLTSGETHYDEPVPGKSLANRIDAGPVHSPDGTYTAYV 531


>gi|207093087|ref|ZP_03240874.1| translocation protein TolB [Helicobacter pylori HPKX_438_AG0C1]
          Length = 395

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 60/369 (16%), Positives = 138/369 (37%), Gaps = 24/369 (6%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           K+ EV++ DL+ S  F++                  + +      Q++    V  E  ++
Sbjct: 26  KLHEVLANDLRTSQHFDV--------SQNKDQGAINYAELKDKKFQLVALVSVALENGNK 77

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           +    +L+DV          +    +      AH ++  +   +      +  R++  S+
Sbjct: 78  IS-RLKLYDVDTETLKKTFDYPIVSSDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSK 136

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +  GI   +L          +      +++   P+++  +Q   Y T   E    +   
Sbjct: 137 YIGPGITNIALADYTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKY 193

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +     + I + + M +    SS+G + L+S+  D   D+Y  D       ++T    
Sbjct: 194 NIQKATH-ENIASSQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPG 252

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLI 361
           I++S  +  D   + F SDR G   +Y+ +       +++  +  ++     +    D I
Sbjct: 253 IDVSGVFLEDDKSMAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSI 309

Query: 362 AFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +             F + ++  +    R L  + + Q P +S  GR++++ +K   +  
Sbjct: 310 VYVSRENLNEFGKTVFNLNLITLNSKYIRRLTVNGSNQMPRFSTDGRNIMYIKKTPQEYA 369

Query: 416 SKLYSIDLN 424
             L  +D N
Sbjct: 370 MGLILLDYN 378


>gi|163786907|ref|ZP_02181355.1| WD40-like Beta Propeller [Flavobacteriales bacterium ALC-1]
 gi|159878767|gb|EDP72823.1| WD40-like Beta Propeller [Flavobacteriales bacterium ALC-1]
          Length = 368

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 61/301 (20%), Positives = 119/301 (39%), Gaps = 61/301 (20%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE------DILRVYLMDTRIDRA-PKRIGN 255
           IR +T   D       +S + +++ + + + +       +  +   +T  D   P  I  
Sbjct: 50  IRQVTYGGDNAEAY--WSFDDKQLVFQSNNVKWDVGCDQMFLMNANETFTDSIAPPMIST 107

Query: 256 FRSMILAPRFSSNGKRALIS-------------VQKDE--------AMDIYSVDLQSNAT 294
            +       F  + K  + +             ++K+         + DI+  DL+ N  
Sbjct: 108 GKGRTTCAYFLPDNKHIIYASTHLKQDKCPDTPLRKNGKYIWPIYDSYDIFVADLEGNIV 167

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           ++LTN +  +   + SP   +IVF S R G  +LY M  +GSD K+I+ +         +
Sbjct: 168 KQLTNEVGYDAEPTVSPKGDKIVFTSTRSGDLELYTMNIDGSDVKQITNEL-GYDGGAFF 226

Query: 355 SPQGDLIAFTKFSGE--------------------KFAIGVMKKDGSQERLLVEDSN-LQ 393
           SP G  + F     +                    +  + +   DGS  R L +  N   
Sbjct: 227 SPDGTKLIFRSSRPKTEKEIKDYKDLLAEGLVEPTEMELYICNADGSDLRQLTDLGNANW 286

Query: 394 APTWSPSGRSLIFSRKKDGDTGS--KLYSIDLNGRNETLINT-------PAYASDPQWVG 444
           +P + PSG  ++FS   + + G    LY ID++G+N   +         P ++++ +++ 
Sbjct: 287 SPFFHPSGEKILFSSNFEAERGFPFNLYLIDIDGKNLKRVTHGETFDAFPVFSNNGKYLA 346

Query: 445 F 445
           F
Sbjct: 347 F 347



 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 50/292 (17%), Positives = 118/292 (40%), Gaps = 53/292 (18%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDR-----DGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           + +++F S +V   +  + + +M+      D      ++  + +      F P+ + + Y
Sbjct: 68  DKQLVFQSNNVKWDVGCDQMFLMNANETFTDSIAPPMISTGKGRTTCA-YFLPDNKHIIY 126

Query: 229 ATYDDE--------------------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           A+   +                    D   +++ D       K++ N       P  S  
Sbjct: 127 ASTHLKQDKCPDTPLRKNGKYIWPIYDSYDIFVADLE-GNIVKQLTNEVGYDAEPTVSPK 185

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--- 325
           G + + +  +   +++Y++++  +  +++TN L  +  A +SPD ++++F S R      
Sbjct: 186 GDKIVFTSTRSGDLELYTMNIDGSDVKQITNELGYDGGAFFSPDGTKLIFRSSRPKTEKE 245

Query: 326 -----------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-- 366
                             +LY+  ++GSD ++++    A++  P + P G+ I F+    
Sbjct: 246 IKDYKDLLAEGLVEPTEMELYICNADGSDLRQLTDLGNANW-SPFFHPSGEKILFSSNFE 304

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTG 415
              G  F + ++  DG   + +       A P +S +G+ L FS  ++   G
Sbjct: 305 AERGFPFNLYLIDIDGKNLKRVTHGETFDAFPVFSNNGKYLAFSSNRNNGGG 356



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 79/268 (29%), Gaps = 53/268 (19%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----DEAMDI 284
            T      +   +          R   +        +S + K+ +              +
Sbjct: 28  TTTGATKSIESLIYPEETHFKSIRQVTYGGDNAEAYWSFDDKQLVFQSNNVKWDVGCDQM 87

Query: 285 YSVDL-----QSNATERLTNTLFINISASYSPDSSQIVFESDR-------------EGK- 325
           + ++       S A   ++        A + PD+  I++ S                GK 
Sbjct: 88  FLMNANETFTDSIAPPMISTGKGRTTCAYFLPDNKHIIYASTHLKQDKCPDTPLRKNGKY 147

Query: 326 -------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                    ++V    G+  K+++ +      +P  SP+GD I FT        +  M  
Sbjct: 148 IWPIYDSYDIFVADLEGNIVKQLTNE-VGYDAEPTVSPKGDKIVFTSTRSGDLELYTMNI 206

Query: 379 DGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG------------------DTGSKLY 419
           DGS  + +  +        +SP G  LIF   +                     T  +LY
Sbjct: 207 DGSDVKQITNELGYDGGAFFSPDGTKLIFRSSRPKTEKEIKDYKDLLAEGLVEPTEMELY 266

Query: 420 SIDLNGRNETLINTPAYASDPQWVGFMD 447
             + +G +   +     A+   W  F  
Sbjct: 267 ICNADGSDLRQLTDLGNAN---WSPFFH 291



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 58/172 (33%), Gaps = 30/172 (17%)

Query: 69  VSKDLQRSD--VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           ++ +L       F+         + + P +    +D+      +L  G V          
Sbjct: 214 ITNELGYDGGAFFSP-DGTKLIFRSSRPKTEKEIKDYK----DLLAEGLVEPT------- 261

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E  L+        + +      A+W    H              G+   +ILF S     
Sbjct: 262 EMELYICNADGSDLRQLTDLGNANWSPFFH------------PSGE---KILFSSNFEAE 306

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
                +L ++D DG N++ +T   +     P FS N + +A+++  +    R
Sbjct: 307 RGFPFNLYLIDIDGKNLKRVTHG-ETFDAFPVFSNNGKYLAFSSNRNNGGGR 357


>gi|257055979|ref|YP_003133811.1| periplasmic component of the Tol biopolymer transport system
           [Saccharomonospora viridis DSM 43017]
 gi|256585851|gb|ACU96984.1| periplasmic component of the Tol biopolymer transport system
           [Saccharomonospora viridis DSM 43017]
          Length = 1059

 Score =  147 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 81/361 (22%), Positives = 131/361 (36%), Gaps = 53/361 (14%)

Query: 108 AQVLVTGRVIKEGKDRL----------------RVEFRLWDVKDRKQ---IIGKKFFSSP 148
           A ++V GRV+ EG+D                      R+ D+ +           F    
Sbjct: 248 ADLVVDGRVVTEGEDVFLFAAEWLDDHRLLYTADGALRIRDLAEGTTRDVPFEATFELPR 307

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
             +R+  H   D     + G      + +L      V+ +  N L +M  DG   R LT 
Sbjct: 308 VDYRRKEHDFDDRSRHRVRGI----LTPVLSPDARQVAFVALNDLWLMPLDGT-PRRLTH 362

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            R      P FSP+ + +AYA  D      +Y+ D R  R  +R+       ++P FS +
Sbjct: 363 DR-FAESNPVFSPDGRYLAYAA-DRAGTPDLYVRDLRTGRE-RRVTALDGAEVSPAFSPD 419

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-------D 321
           G++      +D+    Y +DL++    +L   LF     S+S D   + F +        
Sbjct: 420 GRKLAF---QDQDGATYVLDLRTGRVRQLVPPLFGPGRPSWSADGKTLAFVAVKPYSARF 476

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEAS------YFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           REG  Q+  +      Q   +   E +         PVWSP G  +AF         I  
Sbjct: 477 REGTSQILTVDVVTGKQTYHAPGGEHASISTRGDDGPVWSPDGRQVAFV--VDSTLRIMP 534

Query: 376 MKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +  DG+       +      AP+WS  GR L++           L   D+       ++ 
Sbjct: 535 VAADGTPRGPARELNGEVADAPSWSGDGRRLLYLSN------GTLRLADVTTGKARDVDV 588

Query: 434 P 434
           P
Sbjct: 589 P 589



 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 96/255 (37%), Gaps = 32/255 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  R + +  P  SP+ ++VA+   +D       L    +D  P+R+ + R     P FS
Sbjct: 321 SRHRVRGILTPVLSPDARQVAFVALND-------LWLMPLDGTPRRLTHDRFAESNPVFS 373

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+    +  +    D+Y  DL++    R+T      +S ++SPD  ++ F+ D++G  
Sbjct: 374 PDGRYLAYAADRAGTPDLYVRDLRTGRERRVTALDGAEVSPAFSPDGRKLAFQ-DQDGAT 432

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFSGEKFAIGVMKKD 379
             YV+       +++          P WS  G  +AF        +F      I  +   
Sbjct: 433 --YVLDLRTGRVRQLVPPLFGP-GRPSWSADGKTLAFVAVKPYSARFREGTSQILTVDVV 489

Query: 380 G--------SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TL 430
                      E   +       P WSP GR + F      D+  ++  +  +G      
Sbjct: 490 TGKQTYHAPGGEHASISTRGDDGPVWSPDGRQVAFVV----DSTLRIMPVAADGTPRGPA 545

Query: 431 INTPAYASD-PQWVG 444
                  +D P W G
Sbjct: 546 RELNGEVADAPSWSG 560



 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 75/222 (33%), Gaps = 21/222 (9%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +        +P+   V        D+  V           +R+ +       P    +G 
Sbjct: 55  EGTNLTASAAPDGSVVV-------DLQGVLFRVPAGGGEAERLTSVEDEAAMPDVGPDG- 106

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R       D    I+  +   +   +LT   F +    +S D + I F SDR G   ++ 
Sbjct: 107 RIAYQGYADGRFHIWIAEPDGSEPVQLTRGGFDDREPRWSFDGTTIAFSSDRGGSYDIWT 166

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +     +  R + D       P W P G  + +    G    I  +  DG+   L+    
Sbjct: 167 VDVATGELIRRTDD-PGQEHTPAWHPDGRSLVYVADEG----IAAVAADGTTRTLVPSPG 221

Query: 391 NL---QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +     AP+WSP G  L + R +D           ++GR  T
Sbjct: 222 DEVALHAPSWSPDGGRLAYVRHEDTRADLV-----VDGRVVT 258



 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 75/196 (38%), Gaps = 17/196 (8%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +       L    + +G   +     D    ++ V       ERLT+           PD
Sbjct: 51  VTVTEGTNLTASAAPDGSVVV-----DLQGVLFRVPAGGGEAERLTSVEDEAAMPDVGPD 105

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +I ++   +G+  +++ + +GS+  ++++       +P WS  G  IAF+   G  + 
Sbjct: 106 G-RIAYQGYADGRFHIWIAEPDGSEPVQLTRGGF-DDREPRWSFDGTTIAFSSDRGGSYD 163

Query: 373 IGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           I  +     +     +D   +  P W P GRSL++   +       + ++  +G   TL+
Sbjct: 164 IWTVDVATGELIRRTDDPGQEHTPAWHPDGRSLVYVADEG------IAAVAADGTTRTLV 217

Query: 432 NTPAYA---SDPQWVG 444
            +P        P W  
Sbjct: 218 PSPGDEVALHAPSWSP 233



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/216 (20%), Positives = 85/216 (39%), Gaps = 17/216 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L  +   G     LT   D+    P   P+  ++AY  Y D        +       P +
Sbjct: 77  LFRVPAGGGEAERLTSVEDEAAM-PDVGPDG-RIAYQGYADGRFH--IWIAEPDGSEPVQ 132

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +         PR+S +G     S  +  + DI++VD+ +    R T+      + ++ PD
Sbjct: 133 LTRGGFDDREPRWSFDGTTIAFSSDRGGSYDIWTVDVATGELIRRTDDPGQEHTPAWHPD 192

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              +V+ +D      +  + ++G+ +  + S   E +   P WSP G  +A+ +    + 
Sbjct: 193 GRSLVYVADEG----IAAVAADGTTRTLVPSPGDEVALHAPSWSPDGGRLAYVRHEDTRA 248

Query: 372 AIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
            + V   DG   R++ E  ++   A  W    R L 
Sbjct: 249 DLVV---DG---RVVTEGEDVFLFAAEWLDDHRLLY 278


>gi|254458984|ref|ZP_05072407.1| protein TolB [Campylobacterales bacterium GD 1]
 gi|207084255|gb|EDZ61544.1| protein TolB [Campylobacterales bacterium GD 1]
          Length = 416

 Score =  147 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 73/417 (17%), Positives = 164/417 (39%), Gaps = 27/417 (6%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKD 72
           M+I   LL +        +  A ++V     +   +++  +     D    K  + +  D
Sbjct: 1   MRILFILLFIF---SLSHANDATIEVIKKVESLPTLAVEDSSVSYDDTFRLKFFKALVAD 57

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
           L    +FN + +   +    +   +   +D        ++  ++ ++    L ++ +L  
Sbjct: 58  LNVISLFN-VDRHHRQTHFNDSAVMVDNKD-----MDYVLRYKMFEDDDGALNIDLKLI- 110

Query: 133 VKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
                  + KK+  S  + +  ++HTI+ DI + +     ++  R +    S V    K 
Sbjct: 111 -HKENIALNKKYRISRKNVFMFVSHTIAYDINEFMGAPSVEWMKRRVI--FSRVVAPQKT 167

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + + D   A    +          P+++ N Q   Y T  DE    +  +D +  +  K
Sbjct: 168 EVVISDYTLAYQHTVVKG--GFNIFPKWANNAQNAFYYTSLDEKKPTLKYVDIKTGK-SK 224

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            I +   M++    S NGK+ L+++      D+Y  D+ +  T++LT    I+++A +  
Sbjct: 225 AIISSDGMMICSDVSRNGKKLLLTMAPKGQPDVYLYDVDTFKTQQLTTYGGIDVNAQFM- 283

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------TK 365
           DS  IVF S R G   ++  +   +  +++    +++      S  G+ I +        
Sbjct: 284 DSETIVFISGRLGYPNVFSKKIGSNSVEQMVYYGKSNSAC---STHGEYIVYKARESSNA 340

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           FS   F + ++       R L      + P +S  G +++F +     +   +  ++
Sbjct: 341 FSTNTFNLHLISTKTDFIRRLTATGVNEFPRFSIDGDAILFIKNYKAQSSIGIIRLN 397


>gi|300712709|ref|YP_003738522.1| periplasmic component of the Tol biopolymer transport system
           [Halalkalicoccus jeotgali B3]
 gi|299126393|gb|ADJ16731.1| periplasmic component of the Tol biopolymer transport system
           [Halalkalicoccus jeotgali B3]
          Length = 1046

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 14/211 (6%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    R    +       +A   S +G+  ++    D    ++ +  +    E+LT+   
Sbjct: 46  DNEDIREGTEVTVTDGTNIALTASPDGESVVM----DLHGLLFRLPREGGEAEQLTDVEL 101

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 Y+PD ++I F+   +G   ++ M ++GSD ++I+ D       P WSP G  IA
Sbjct: 102 EPTQPDYAPDGARIAFQGYGDGNFDIWTMAADGSDIQQIT-DGFWDDRKPQWSPDGTQIA 160

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSK---- 417
           F+    E + I  +  +    +   +DS+    PTWSP G  + +     G+ G      
Sbjct: 161 FSSDRNENYDIWTVDIETGDLQQWTDDSSENFEPTWSPDGTEIAYVADPTGEYGDGDDSP 220

Query: 418 --LYSIDLNGRNETLINTPAYAS--DPQWVG 444
             + +++ +G   TL++     +   P W  
Sbjct: 221 ITIEAVNQDGETRTLVSGQMGQTLHSPSWSP 251



 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 95/237 (40%), Gaps = 21/237 (8%)

Query: 222 NQQKVAYATYDDEDILRVYLMDT-----RIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           +   +A     D + + + L        R     +++ +       P ++ +G R     
Sbjct: 60  DGTNIALTASPDGESVVMDLHGLLFRLPREGGEAEQLTDVELEPTQPDYAPDGARIAFQG 119

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D   DI+++    +  +++T+  + +    +SPD +QI F SDR     ++ +     
Sbjct: 120 YGDGNFDIWTMAADGSDIQQITDGFWDDRKPQWSPDGTQIAFSSDRNENYDIWTVDIETG 179

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--------IGVMKKDGSQERLLVE 388
           D ++ + D   + F+P WSP G  IA+      ++         I  + +DG    L+  
Sbjct: 180 DLQQWTDDSSEN-FEPTWSPDGTEIAYVADPTGEYGDGDDSPITIEAVNQDGETRTLVSG 238

Query: 389 --DSNLQAPTWSPSGRSLIFSR-----KKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                L +P+WSP+G  L + R      + GD    +    +    +  I TP + S
Sbjct: 239 QMGQTLHSPSWSPNGEDLAYVRINEQENRTGDIDLMVSESPVTDGEDVFIFTPHWLS 295



 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 55/262 (20%), Positives = 106/262 (40%), Gaps = 41/262 (15%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  PR SP+ + VA+   +D       L   RI + P+RI +       P +S +G+   
Sbjct: 351 ILTPRLSPDGEHVAFIALND-------LWLMRIGQPPQRITDDSFYQADPAWSPDGRYVT 403

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            S  ++   D+Y  DLQ+   +++T      ++A++SPD S+I F++    +  L     
Sbjct: 404 YSSDENGTQDLYVHDLQTGENQQVTARDDAVVAATWSPDGSKIAFQNQH--RTTLIAEVE 461

Query: 334 NGSDQKRISQDKEASY-----FDPVWSPQGDLIAFT-------KFSGEKFAIGVMKKDGS 381
              ++  +S  +EA         P WS  G+ +A         +F      I  +  +  
Sbjct: 462 RSENEIELSDGQEAIRPLFLPGRPTWSADGNTVAVAAVKQYSDRFRSGTSQILTVDIETG 521

Query: 382 QER--------LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR------- 426
           +E           +       P WSP GR + F      ++  ++  +D  G        
Sbjct: 522 EETFYPPGEEFKSLSTRGNDGPVWSPDGRWMAFVV----ESTLRVMPVDEAGEPTGPATQ 577

Query: 427 -NETLINTPAYASDPQWVGFMD 447
             E   + P ++ D +W+ +++
Sbjct: 578 ITEEATDAPTWSGDSEWLLYLN 599



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 81/460 (17%), Positives = 153/460 (33%), Gaps = 67/460 (14%)

Query: 12  NMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
            +   + L  +  GGF  T+                  +  T   +I        E V  
Sbjct: 22  GVLGGVALSGLSAGGFAYTAAGHADNEDIREGTE----VTVTDGTNIALTASPDGESVVM 77

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL    +F L  +    +++T+ +  P   D+   GA++   G     G     +     
Sbjct: 78  DLHGL-LFRLPREGGEAEQLTDVELEPTQPDYAPDGARIAFQG----YGDGNFDI----- 127

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
                         +  +  ++I     DD     + +     ++I F S+   +     
Sbjct: 128 ----------WTMAADGSDIQQITDGFWDDRKPQWSPDG----TQIAFSSDRNEN----Y 169

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-----YDDEDILRVYLMDTRI 246
            +  +D +  +++  T    +  FEP +SP+  ++AY       Y D D   + +     
Sbjct: 170 DIWTVDIETGDLQQWTDDSSE-NFEPTWSPDGTEIAYVADPTGEYGDGDDSPITIEAVNQ 228

Query: 247 DRAPKRIGNFRSMIL--APRFSSNGKRALISVQKDEAMDIYSVDL--------QSNATER 296
           D   + + + +      +P +S NG+        ++      +DL               
Sbjct: 229 DGETRTLVSGQMGQTLHSPSWSPNGEDLAYVRINEQENRTGDIDLMVSESPVTDGEDVFI 288

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQL-----YVMQSNGSDQKRISQDKEASY-- 349
            T          YS D +    + D      +     + + +   DQK    D   +   
Sbjct: 289 FTPHWLSTDEILYSADGNVRTLDLDSGTSSNVPFSATFDVPALDYDQKSYDFDNTGACEV 348

Query: 350 ---FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLI 405
                P  SP G+ +AF   +     + +M+  G   + + +DS  QA P WSP GR + 
Sbjct: 349 QGILTPRLSPDGEHVAFIALND----LWLMRI-GQPPQRITDDSFYQADPAWSPDGRYVT 403

Query: 406 FSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
           +S  ++G     LY  DL  G N+ +           W  
Sbjct: 404 YSSDENGTQ--DLYVHDLQTGENQQVTARDDAVVAATWSP 441



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 100/276 (36%), Gaps = 43/276 (15%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           S + ++      G   + +   +           ++  +++DG     ++    Q L  P
Sbjct: 188 SSENFEPTWSPDGTEIAYVADPTGEYGDGDDSPITIEAVNQDGETRTLVSGQMGQTLHSP 247

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRF-SSNGKRALIS 275
            +SPN + +AY   ++++       D  +  +   + +   + I  P + S++    L S
Sbjct: 248 SWSPNGEDLAYVRINEQENR---TGDIDLMVSESPVTDGEDVFIFTPHWLSTD--EILYS 302

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINI------------------------SASYSP 311
              +    + ++DL S  +  +  +   ++                        +   SP
Sbjct: 303 ADGN----VRTLDLDSGTSSNVPFSATFDVPALDYDQKSYDFDNTGACEVQGILTPRLSP 358

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   + F +       L++M+  G   +RI+ D      DP WSP G  + ++       
Sbjct: 359 DGEHVAFIA----LNDLWLMRI-GQPPQRITDDSFY-QADPAWSPDGRYVTYSSDENGTQ 412

Query: 372 AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
            + V      + + +   D  + A TWSP G  + F
Sbjct: 413 DLYVHDLQTGENQQVTARDDAVVAATWSPDGSKIAF 448


>gi|88803169|ref|ZP_01118695.1| hypothetical protein PI23P_11292 [Polaribacter irgensii 23-P]
 gi|88780735|gb|EAR11914.1| hypothetical protein PI23P_11292 [Polaribacter irgensii 23-P]
          Length = 1135

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 15/200 (7%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R        L+   S +GK  L S+  D    +Y++  +     R+T+ L ++   SYSP
Sbjct: 54  RFNTNEGTWLSLDMSPDGKTILFSMLGD----LYTIPFKGGKAIRITDGLALDAQPSYSP 109

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D  +I F SDR+G + +++M     + +++++DK        WSP G+ I          
Sbjct: 110 DGKRIAFTSDRDGNDNVWIMDLASKETRQVTKDKRGLVESVAWSPDGEYIV-AAKGKRNL 168

Query: 372 AIGVMKKD-GSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDG------DTGSKLYSID 422
            + +  KD GS  +L+ E  +L+   P +SP  + + +S +  G          ++Y  D
Sbjct: 169 KLHLYHKDAGSGTQLIKEPKDLKTVEPVFSPDNKYIYYSARTGGWNYNAQLPQYQIYRYD 228

Query: 423 L-NGRNETLINTPAYASDPQ 441
           L  G++  + +    A  P 
Sbjct: 229 LATGKSSKITSRYGSAFTPT 248



 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 83/227 (36%), Gaps = 14/227 (6%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + S  +      +   +   L  +   G     +T     +  +P +SP+ +++A+ 
Sbjct: 59  EGTWLSLDMSPDGKTILFSMLGDLYTIPFKGGKAIRITDGL-ALDAQPSYSPDGKRIAFT 117

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +  D +   V++MD       +   + R ++ +  +S +G+  + + +    + ++    
Sbjct: 118 SDRDGN-DNVWIMDLASKETRQVTKDKRGLVESVAWSPDGEYIV-AAKGKRNLKLHLYHK 175

Query: 290 QSNATERLTNTLFI--NISASYSPDSSQIVFESDREGKE--------QLYVMQSNGSDQK 339
            + +  +L         +   +SPD+  I + +   G          Q+Y          
Sbjct: 176 DAGSGTQLIKEPKDLKTVEPVFSPDNKYIYYSARTGGWNYNAQLPQYQIYRYDLATGKSS 235

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +I+  +  S F P  S  G  + +     EK  + +       E  L
Sbjct: 236 KITS-RYGSAFTPTLSNDGKYMVYGSRYEEKTGLVLRNLISGDENWL 281



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 57/312 (18%), Positives = 103/312 (33%), Gaps = 57/312 (18%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI F S+   +      + +MD      R +T  +  ++    +SP+ + +       + 
Sbjct: 113 RIAFTSDRDGNDN----VWIMDLASKETRQVTKDKRGLVESVAWSPDGEYI--VAAKGKR 166

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEA--------MDIYS 286
            L+++L         + I   + +  + P FS + K    S +              IY 
Sbjct: 167 NLKLHLYHKDAGSGTQLIKEPKDLKTVEPVFSPDNKYIYYSARTGGWNYNAQLPQYQIYR 226

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            DL +  + ++T+      + + S D   +V+ S  E K  L +      D+  ++   +
Sbjct: 227 YDLATGKSSKITSRYGSAFTPTLSNDGKYMVYGSRYEEKTGLVLRNLISGDENWLAYPIQ 286

Query: 347 ASYFDPVWS------------------PQGDLIAFTKFSGE-----KFAIGVMKKDG--- 380
               + V S                    G  I     SG+      F + V    G   
Sbjct: 287 RDDQESVASLGVLPAMTFTLNNKEVLASYGGKIYRIPVSGDAAIEIPFEVDVALAIGPKL 346

Query: 381 -------SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
                      LL        P  SP G  ++F      +  +KLY + L NG+ E L  
Sbjct: 347 EFKYPISDDTELLANQIRNAKP--SPDGTQIVF------NALNKLYVMKLPNGKPERLTK 398

Query: 433 TPAYASDPQWVG 444
                + P W  
Sbjct: 399 MDLIETQPNWSP 410



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 61/162 (37%), Gaps = 11/162 (6%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           + L+S    R        +S   SPD   I+F         LY +   G    RI+ D  
Sbjct: 45  LPLESGRMIRFNTNEGTWLSLDMSPDGKTILFSM----LGDLYTIPFKGGKAIRIT-DGL 99

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSL 404
           A    P +SP G  IAFT        + +M     + R + +D    +++  WSP G  +
Sbjct: 100 ALDAQPSYSPDGKRIAFTSDRDGNDNVWIMDLASKETRQVTKDKRGLVESVAWSPDGEYI 159

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS--DPQWVG 444
           + + K   +    LY  D  G    LI  P      +P +  
Sbjct: 160 V-AAKGKRNLKLHLYHKDA-GSGTQLIKEPKDLKTVEPVFSP 199



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 27/181 (14%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDRE 323
           S +G + +     +    +Y + L +   ERLT    I    ++SP+  +IV+   SD +
Sbjct: 369 SPDGTQIVF----NALNKLYVMKLPNGKPERLTKMDLIETQPNWSPNGKEIVYATWSDID 424

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------ 371
           G   LY + S G   +R++    A Y  PVW  + + I FTK S + F            
Sbjct: 425 GG-HLYKVNSKGGKPQRLTTVS-AIYNTPVWDAKTNRIVFTKGSAQSFKNAYTRAAFSGG 482

Query: 372 -AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             +  +  +G     + + +  + P +  S   +  S  K       L SI  +G +E +
Sbjct: 483 EDLAWISSEGGNNTFIAKANGRENPHFVKSDARIYLSNSKG------LSSIRWDGTDEKI 536

Query: 431 I 431
           +
Sbjct: 537 V 537



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 96/264 (36%), Gaps = 53/264 (20%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  ++ +   +     ++Y+M    +  P+R+     +   P +S NGK  + +   D
Sbjct: 369 SPDGTQIVFNALN-----KLYVMKL-PNGKPERLTKMDLIETQPNWSPNGKEIVYATWSD 422

Query: 280 -EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-------------EGK 325
            +   +Y V+ +    +RLT    I  +  +   +++IVF                  G 
Sbjct: 423 IDGGHLYKVNSKGGKPQRLTTVSAIYNTPVWDAKTNRIVFTKGSAQSFKNAYTRAAFSGG 482

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           E L  + S G +   I++         V S       +   S    +I     DG+ E++
Sbjct: 483 EDLAWISSEGGNNTFIAKANGRENPHFVKS-DAR--IYLSNSKGLSSIRW---DGTDEKI 536

Query: 386 LVE--------DSNLQAPTWS------P-SGRS----LIFSRKKDGDTG-----SKLYSI 421
           +V+        DS+  A ++S      P   +     +      +G+       + +Y +
Sbjct: 537 VVKITGIVTFGDSHKDALSFSNLEEGTPEDNKKASKPVAVYMAPEGNKAMALIHTDIYVV 596

Query: 422 DLNGRNETLINTPAY---ASDPQW 442
            +    +T   + +    +  P W
Sbjct: 597 TIPTYGQTPTISVSDTQASQFPSW 620



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/248 (13%), Positives = 79/248 (31%), Gaps = 56/248 (22%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D I  +P +SPN +++ YAT+ D D   +Y ++++    P+R+    ++   P + +   
Sbjct: 400 DLIETQPNWSPNGKEIVYATWSDIDGGHLYKVNSK-GGKPQRLTTVSAIYNTPVWDAKTN 458

Query: 271 RALIS-------------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           R + +                    D+  +  +      +        +  +   S   +
Sbjct: 459 RIVFTKGSAQSFKNAYTRAAFSGGEDLAWISSEGGNNTFIAKANGRE-NPHFV-KSDARI 516

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWS--------------------- 355
           + S+ +G   +    ++     +I+             S                     
Sbjct: 517 YLSNSKGLSSIRWDGTDEKIVVKITGIVTFGDSHKDALSFSNLEEGTPEDNKKASKPVAV 576

Query: 356 ---PQGD----------LIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQAPTWSP 399
              P+G+           +      G+   I V     SQ    +L       + P W+ 
Sbjct: 577 YMAPEGNKAMALIHTDIYVVTIPTYGQTPTISVSDTQASQFPSWKLTTFGG--EFPAWAA 634

Query: 400 SGRSLIFS 407
           +G+ + +S
Sbjct: 635 NGKMVYWS 642


>gi|167946736|ref|ZP_02533810.1| TolB [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 163

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 1/138 (0%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +++ K    DIY  D  +    ++T    I+   ++SPD   IVF SDR GK Q+Y   S
Sbjct: 1   MTLSKGGNPDIYVFDFTTRKLRQITRHYAIDTEPAWSPDGRSIVFTSDRGGKPQIYKTPS 60

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            G   +R++     +     ++P G  +A       ++ I  ++ D    ++L   S  +
Sbjct: 61  YGGKAERVTFQNSYNARA-SYAPDGKSLAMVTRENGQYRIATLQLDSGVMQVLSRGSLDE 119

Query: 394 APTWSPSGRSLIFSRKKD 411
           +P+++P+G  +I++ KK 
Sbjct: 120 SPSFAPNGSMIIYASKKG 137



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 55/140 (39%), Gaps = 3/140 (2%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            T        +Y+ D    R  ++I    ++   P +S +G+  + +  +     IY   
Sbjct: 1   MTLSKGGNPDIYVFD-FTTRKLRQITRHYAIDTEPAWSPDGRSIVFTSDRGGKPQIYKTP 59

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                 ER+T     N  ASY+PD   +   +   G+ ++  +Q +    + +S+     
Sbjct: 60  SYGGKAERVTFQNSYNARASYAPDGKSLAMVTRENGQYRIATLQLDSGVMQVLSRGS--L 117

Query: 349 YFDPVWSPQGDLIAFTKFSG 368
              P ++P G +I +    G
Sbjct: 118 DESPSFAPNGSMIIYASKKG 137



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 57/135 (42%), Gaps = 4/135 (2%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S      + V D     +R +T     I  EP +SP+ + + + + D     ++Y     
Sbjct: 4   SKGGNPDIYVFDFTTRKLRQITR-HYAIDTEPAWSPDGRSIVFTS-DRGGKPQIY-KTPS 60

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +R+    S      ++ +GK   +  +++    I ++ L S   + L+    ++ 
Sbjct: 61  YGGKAERVTFQNSYNARASYAPDGKSLAMVTRENGQYRIATLQLDSGVMQVLSRG-SLDE 119

Query: 306 SASYSPDSSQIVFES 320
           S S++P+ S I++ S
Sbjct: 120 SPSFAPNGSMIIYAS 134



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 53/123 (43%), Gaps = 4/123 (3%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGS 381
            G   +YV        ++I++   A   +P WSP G  I FT   G K  I       G 
Sbjct: 6   GGNPDIYVFDFTTRKLRQITR-HYAIDTEPAWSPDGRSIVFTSDRGGKPQIYKTPSYGGK 64

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            ER+  ++S     +++P G+SL    +++G    ++ ++ L+     +++  +    P 
Sbjct: 65  AERVTFQNSYNARASYAPDGKSLAMVTRENGQ--YRIATLQLDSGVMQVLSRGSLDESPS 122

Query: 442 WVG 444
           +  
Sbjct: 123 FAP 125



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 4/84 (4%)

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            T   G    I V      + R +     +   P WSP GRS++F+  + G    ++Y  
Sbjct: 1   MTLSKGGNPDIYVFDFTTRKLRQITRHYAIDTEPAWSPDGRSIVFTSDRGGK--PQIYKT 58

Query: 422 -DLNGRNETLINTPAYASDPQWVG 444
               G+ E +    +Y +   +  
Sbjct: 59  PSYGGKAERVTFQNSYNARASYAP 82



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 12/138 (8%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           F  +    R+I    + D   + + +       I+F S+       K  +      G   
Sbjct: 14  FDFTTRKLRQITRHYAIDTEPAWSPDG----RSIVFTSDRGG----KPQIYKTPSYGGKA 65

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +T  ++       ++P+ + +A  T ++       +   ++D    ++ +  S+  +P
Sbjct: 66  ERVT-FQNSYNARASYAPDGKSLAMVTRENGQYR---IATLQLDSGVMQVLSRGSLDESP 121

Query: 264 RFSSNGKRALISVQKDEA 281
            F+ NG   + + +K +A
Sbjct: 122 SFAPNGSMIIYASKKGQA 139


>gi|222823241|ref|YP_002574814.1| translocation protein TolB precursor [Campylobacter lari RM2100]
 gi|222538462|gb|ACM63563.1| translocation protein TolB precursor [Campylobacter lari RM2100]
          Length = 399

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 116/279 (41%), Gaps = 11/279 (3%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
             +  +AH     + + +     D+    + ++ +   G  ++ + + D      + L  
Sbjct: 112 EEYPFLAHRSVAQMNKKLGFAPVDWMDHKILIART--QGSKQSDILLADYTLTYQKVLI- 168

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
               +   P+++  +Q   Y T  +++I  +Y  + +     K I + + M++A   S +
Sbjct: 169 -SKGLNLFPKWANKEQNAFYFTAYEDEIPTLYKYNMKNKNITKIIAS-KGMMVASDVSDD 226

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           GK+ L+++   +  D+Y  D+ S    ++TN + I+++ ++     +IVF SDR G   +
Sbjct: 227 GKKILLTMAPKDQPDVYLYDVDSKNLTQITNYMGIDVNGNFVDGDKKIVFVSDRLGYPNI 286

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---SGEKFAIGVMKKDGSQERL 385
           ++   + +  +++    + +     +      + ++         F + +M       R 
Sbjct: 287 FMQNLDSNLTEQVVFHGKNNSSVSTY---KHYMVYSSREINQSGVFNLYLMSTQSDYIRQ 343

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           L  +     P +S  G S++F +     +   +  I+ N
Sbjct: 344 LTANGKNLFPRFSSDGESVVFIKYLGSQSALGVIRINAN 382



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/222 (12%), Positives = 79/222 (35%), Gaps = 6/222 (2%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-ISVQKDEAM 282
            K+  A         + L D  +      I   + + L P++++  + A   +  +DE  
Sbjct: 139 HKILIARTQGSKQSDILLADYTLTYQKVLIS--KGLNLFPKWANKEQNAFYFTAYEDEIP 196

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y  ++++    ++  +  + +++  S D  +I+     + +  +Y+   +  +  +I+
Sbjct: 197 TLYKYNMKNKNITKIIASKGMMVASDVSDDGKKILLTMAPKDQPDVYLYDVDSKNLTQIT 256

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSG 401
            +      +  +      I F         I +   D +  E+++    N  + + +   
Sbjct: 257 -NYMGIDVNGNFVDGDKKIVFVSDRLGYPNIFMQNLDSNLTEQVVFHGKNNSSVS-TYKH 314

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             +  SR+ +      LY +         +        P++ 
Sbjct: 315 YMVYSSREINQSGVFNLYLMSTQSDYIRQLTANGKNLFPRFS 356


>gi|269837976|ref|YP_003320204.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269787239|gb|ACZ39382.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 663

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 91/281 (32%), Gaps = 59/281 (20%)

Query: 210 RDQILFEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           R + L +P+ +P+ ++VAY       + +       +         R         +PR+
Sbjct: 12  RIRYLGDPQIAPDGRRVAYVVTEIDLEGKRYRSAIWVVNADGSGRTRFTAGTHKDTSPRW 71

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----- 320
           S +G R      +D    +Y +       ER+T+         +SPD + + F S     
Sbjct: 72  SPDGSRLAFLSDRDGVTQLYVMPSDGGEPERITDLKHGVADPVWSPDGAWLAFVSKVGPE 131

Query: 321 -----------DR--------------------------EGKEQLYVMQSNGSDQKRISQ 343
                      DR                          + +  ++++ + G   ++I+ 
Sbjct: 132 GPVQRADETEEDRKRAAQRSDTKVIRSLKYKLDGEGFFDDRRRHIFIVPATGGTPRQIT- 190

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLV-EDSNLQAPT 396
           D +     P WSP G  IAF     +         I +   DG + R +   D    +P 
Sbjct: 191 DGDWDDTQPAWSPDGRAIAFVSNRTDDRERNTFSDIWIAPLDGGEPRRITPSDGVYNSPA 250

Query: 397 WSPSGRSLIFSRK-----KDGDTGSKLYSIDLNGRNETLIN 432
           +SP G  + +            T + L+     G     + 
Sbjct: 251 FSPDGDWIAYVGNPIVEPYGPTTLTGLWVAPTTGGEARNLT 291



 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/337 (16%), Positives = 114/337 (33%), Gaps = 79/337 (23%)

Query: 176 RILFVSESVVSGIIKNS--LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           R+ +V   +     +    + V++ DG+  R    +       PR+SP+  ++A+ + D 
Sbjct: 27  RVAYVVTEIDLEGKRYRSAIWVVNADGSG-RTRFTAGTHKDTSPRWSPDGSRLAFLS-DR 84

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
           + + ++Y+M +     P+RI + +  +  P +S +G       +                
Sbjct: 85  DGVTQLYVMPSD-GGEPERITDLKHGVADPVWSPDGAWLAFVSKVGPEGPVQRADETEED 143

Query: 278 --------------------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                                      D    I+ V        ++T+  + +   ++SP
Sbjct: 144 RKRAAQRSDTKVIRSLKYKLDGEGFFDDRRRHIFIVPATGGTPRQITDGDWDDTQPAWSP 203

Query: 312 DSSQIVFESDREGKEQ------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           D   I F S+R    +      +++   +G + +RI+   +  Y  P +SP GD IA+  
Sbjct: 204 DGRAIAFVSNRTDDRERNTFSDIWIAPLDGGEPRRITP-SDGVYNSPAFSPDGDWIAYVG 262

Query: 366 F-------SGEKFAIGVMKKDGSQERLLVEDSNLQA----------------PTWSPSGR 402
                         + V    G + R L    + +                 P W P G 
Sbjct: 263 NPIVEPYGPTTLTGLWVAPTTGGEARNLTAALDREVGNTVLSDQHYAVAPQRPLWLPDGS 322

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            L+      G     +  + L+G    ++      ++
Sbjct: 323 GLLTLISDQGTVP--VLRVSLDGETTVVVGGDREVAN 357



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 54/384 (14%), Positives = 118/384 (30%), Gaps = 79/384 (20%)

Query: 118 KEGKDRLRVEFRL--WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           +   D  RV + +   D++ ++        ++  S R      +   ++  +       S
Sbjct: 20  QIAPDGRRVAYVVTEIDLEGKRYRSAIWVVNADGSGRT---RFTAGTHKDTSPRWSPDGS 76

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE- 234
           R+ F+S+          L VM  DG     +T  +  +  +P +SP+   +A+ +     
Sbjct: 77  RLAFLSDRDG----VTQLYVMPSDGGEPERITDLKHGVA-DPVWSPDGAWLAFVSKVGPE 131

Query: 235 ---------------------------------------DILRVYLMDTRIDRAPKRIGN 255
                                                  D  R   +       P++I +
Sbjct: 132 GPVQRADETEEDRKRAAQRSDTKVIRSLKYKLDGEGFFDDRRRHIFIVPATGGTPRQITD 191

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAM------DIYSVDLQSNATERLTNTLFINISASY 309
                  P +S +G+       + +        DI+   L      R+T +  +  S ++
Sbjct: 192 GDWDDTQPAWSPDGRAIAFVSNRTDDRERNTFSDIWIAPLDGGEPRRITPSDGVYNSPAF 251

Query: 310 SPDSSQIVFESDR-------EGKEQLYVMQSNGSDQKRISQDKEASYFD----------- 351
           SPD   I +  +             L+V  + G + + ++   +    +           
Sbjct: 252 SPDGDWIAYVGNPIVEPYGPTTLTGLWVAPTTGGEARNLTAALDREVGNTVLSDQHYAVA 311

Query: 352 ---PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
              P+W P G  +           +  +  DG    ++  D  +   + +  G  L F  
Sbjct: 312 PQRPLWLPDGSGLLTLISDQGTVPVLRVSLDGETTVVVGGDREVANVSVAGDGT-LAFLA 370

Query: 409 KKDGDTGSKLYSIDLNGRNETLIN 432
                   ++Y    +G NE  ++
Sbjct: 371 SSP-TRPLEVYVAAADGSNEREVS 393



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 69/228 (30%), Gaps = 29/228 (12%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  + ++   G   R +T   D    +P +SP+ + +A+ +   +D  R    D  I
Sbjct: 170 DDRRRHIFIVPATGGTPRQITDG-DWDDTQPAWSPDGRAIAFVSNRTDDRERNTFSDIWI 228

Query: 247 ----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATE 295
                  P+RI     +  +P FS +G                     ++          
Sbjct: 229 APLDGGEPRRITPSDGVYNSPAFSPDGDWIAYVGNPIVEPYGPTTLTGLWVAPTTGGEAR 288

Query: 296 RLTNTLFINIS---------------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            LT  L   +                  + PD S ++     +G   +  +  +G     
Sbjct: 289 NLTAALDREVGNTVLSDQHYAVAPQRPLWLPDGSGLLTLISDQGTVPVLRVSLDGETTVV 348

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +    +    +   +  G L            + V   DGS ER + E
Sbjct: 349 V--GGDREVANVSVAGDGTLAFLASSPTRPLEVYVAAADGSNEREVSE 394



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 21/55 (38%), Gaps = 5/55 (9%)

Query: 395 PTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
           P  +P GR + +       +     S ++ ++ +G   T      +  + P+W  
Sbjct: 19  PQIAPDGRRVAYVVTEIDLEGKRYRSAIWVVNADGSGRTRFTAGTHKDTSPRWSP 73


>gi|89889850|ref|ZP_01201361.1| putative periplasmic component of the Tol biopolymer transport
           system [Flavobacteria bacterium BBFL7]
 gi|89518123|gb|EAS20779.1| putative periplasmic component of the Tol biopolymer transport
           system [Flavobacteria bacterium BBFL7]
          Length = 376

 Score =  146 bits (369), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 90/212 (42%), Gaps = 27/212 (12%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +   D   +++ D        ++ N +     P  S  G + + +  +   +++Y++D
Sbjct: 155 YVWPIYDSYDIFVADLE-GNITAQLTNEKGYDAEPTVSPQGDKIVFTSDRSGDLELYTMD 213

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--------------------EQL 328
           +  +  +++T  L  +  A +SPD SQ++F S R                        +L
Sbjct: 214 IDGSNVKQITYELGYDGGAFFSPDGSQLIFRSSRPKTEEEIKEYKDLLKVGLVQPTEMEL 273

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKKDGSQER 384
           Y+  ++GSD ++++Q   A++  P + P G  + F+       G  F + ++  DG+   
Sbjct: 274 YICNADGSDLRQLTQLGNANW-SPFFLPDGKRVLFSSNFEAERGFPFNLYMINTDGTGLE 332

Query: 385 LLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTG 415
            +       A P +S +G+ L FS  ++   G
Sbjct: 333 RITHGETFDAFPVFSNNGKYLAFSSNRNNGGG 364



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 64/170 (37%), Gaps = 32/170 (18%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKE----QLYVMQSNGS---DQKRISQD 344
              +++T     N  A +S D  Q+VF+S+    +    Q+++M +  S      ++   
Sbjct: 57  KDIQQVTFG-GDNAEAYWSFDDKQLVFQSNNTAWDVECDQMFLMNNGDSFRESVPKMIST 115

Query: 345 KEASYFDPVWSPQGDLIAFTKFS---------------------GEKFAIGVMKKDGSQE 383
            +       + P  + I +                          + + I V   +G+  
Sbjct: 116 GKGRTTCAYFLPDNEHIIYASTHLAMDDCPDTPLKENGKYVWPIYDSYDIFVADLEGNIT 175

Query: 384 RLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             L  E      PT SP G  ++F+  + GD   +LY++D++G N   I 
Sbjct: 176 AQLTNEKGYDAEPTVSPQGDKIVFTSDRSGD--LELYTMDIDGSNVKQIT 223


>gi|317009739|gb|ADU80319.1| translocation protein TolB [Helicobacter pylori India7]
          Length = 417

 Score =  146 bits (368), Expect = 7e-33,   Method: Composition-based stats.
 Identities = 58/369 (15%), Positives = 137/369 (37%), Gaps = 24/369 (6%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           K+ EV++ DL+ S  F++                  + +       ++    V  E  ++
Sbjct: 48  KLHEVLANDLRTSQHFDV--------SQNKDQGAINYAELKDKKVHLVALVSVAVENGNK 99

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           +    +L+DV          +    +      AH ++  +   +      +  R++  S+
Sbjct: 100 IS-RLKLYDVDTETLKKTFDYPILSSDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSK 158

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +  GI   +L          +      +++   P+++  +Q   Y T   E    +   
Sbjct: 159 YIGPGITNIALADYTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKY 215

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +     + I + + M +    SS+G + L+S+  +   D+Y  D       ++T    
Sbjct: 216 NIQKATH-ENIASSQGMAVVSSVSSDGSKILMSLAPNGQPDVYLYDTHKKTKTKITRYPG 274

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLI 361
           I++S  +  D   + F SDR G   +Y+ +       +++  +  ++     +    D I
Sbjct: 275 IDVSGVFLEDDKSMAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSI 331

Query: 362 AFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +             F + ++  +    R L  + + Q P +S  GR++++ +K   +  
Sbjct: 332 VYVSRENLNEFGKTVFNLNLITLNSKYIRRLTVNGSNQMPRFSTDGRNIMYIKKTPQEYA 391

Query: 416 SKLYSIDLN 424
             L  +D N
Sbjct: 392 MGLILLDYN 400


>gi|196229417|ref|ZP_03128282.1| peptidase M28 [Chthoniobacter flavus Ellin428]
 gi|196226649|gb|EDY21154.1| peptidase M28 [Chthoniobacter flavus Ellin428]
          Length = 988

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 76/313 (24%), Positives = 124/313 (39%), Gaps = 61/313 (19%)

Query: 192 SLCVMDRDGAN-IRYLTPSRDQILFEPR-----FSPNQQKVAYATYDDED--ILRVYLMD 243
           ++     D AN  R++T SR  I    R     F P+   + + +  +E     ++YL+D
Sbjct: 13  TVAAFADDAANEARFITNSRQLIFEGKRSGEGYFHPDGNLMIFQSEREEGNPFYQMYLLD 72

Query: 244 TRIDRAPKRIGN-----------------FRSMILAP----------RFSSNGKRALISV 276
                  +                     F S    P           F ++GK+   S 
Sbjct: 73  LLSGETARVSTGVGKTTCGFFQPGTNRVLFASTHADPEALAKQKAELDFRASGKQRRYSW 132

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE---------- 326
             D+ MDIYS +        LTN+   +   S+SPD  QIVF S R              
Sbjct: 133 DYDQTMDIYSCNQDGTQMVNLTNSPGYDAEGSFSPDGKQIVFCSLRAAFPLEKLTPEQRA 192

Query: 327 ----------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIG 374
                      +Y+M ++GS+ +R++ D       P +SP G  I +  F        + 
Sbjct: 193 RYEKDPAYFGDIYLMNADGSNVRRLT-DAPGYDGGPFFSPDGARIIWRHFDESGMFADVW 251

Query: 375 VMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE--TLI 431
            MK DGS +  + +  ++  AP + PSG+ +IF+  K G T  +LY +D+NG +E   + 
Sbjct: 252 TMKLDGSDKHRVTDFKSMSWAPFYHPSGKYIIFTSNKLGFTNFELYIVDVNGDHEPVRVT 311

Query: 432 NTPAYASDPQWVG 444
            T  +   P +  
Sbjct: 312 YTDGFDGLPVFSP 324



 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 31/233 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV- 276
           R S  Q++    ++D +  + +Y  +    +    + N         FS +GK+ +    
Sbjct: 122 RASGKQRR---YSWDYDQTMDIYSCNQDGTQMVN-LTNSPGYDAEGSFSPDGKQIVFCSL 177

Query: 277 -----------------QKDEAM--DIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                            +KD A   DIY ++   +   RLT+    +    +SPD ++I+
Sbjct: 178 RAAFPLEKLTPEQRARYEKDPAYFGDIYLMNADGSNVRRLTDAPGYDGGPFFSPDGARII 237

Query: 318 FES-DREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAI 373
           +   D  G    ++ M+ +GSD+ R++  K  S+  P + P G  I FT        F +
Sbjct: 238 WRHFDESGMFADVWTMKLDGSDKHRVTDFKSMSW-APFYHPSGKYIIFTSNKLGFTNFEL 296

Query: 374 GVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            ++  +G  E  R+   D     P +SP+G+ + ++  +  D  S+++  D N
Sbjct: 297 YIVDVNGDHEPVRVTYTDGFDGLPVFSPNGKKISWTSGRTSDGKSQIFLADWN 349



 Score = 40.0 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 3/103 (2%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H ++D  ++S++       S    +  S   G     L ++D +G +        D    
Sbjct: 261 HRVTD--FKSMSWAPFYHPSGKYIIFTSNKLGFTNFELYIVDVNGDHEPVRVTYTDGFDG 318

Query: 216 EPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFR 257
            P FSPN +K+++ +    D   +++L D   + A K I    
Sbjct: 319 LPVFSPNGKKISWTSGRTSDGKSQIFLADWNHEAALKAIEESP 361


>gi|297380305|gb|ADI35192.1| Tol-Pal system beta propeller repeat protein TolB [Helicobacter
           pylori v225d]
          Length = 417

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 65/416 (15%), Positives = 148/416 (35%), Gaps = 27/416 (6%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRS 76
           L L L+   G F T     +           V  +     +      K+ EV++ DL+ S
Sbjct: 4   LWLFLICTIGLFATDKTLDIIKTIQKLPKIEVRYSI---DNDANYALKLHEVLANDLKTS 60

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F++                  + +       ++    V  E  +++    +L+DV   
Sbjct: 61  QHFDV--------SQNKDQGAINYAELKDKKVHLVALVSVAVENGNKIS-RLKLYDVDTE 111

Query: 137 KQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
                  +    +      AH ++  +   +      +  R++  S+ +  GI   +L  
Sbjct: 112 TLKKTFDYPILSSDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSKYIGPGITNIALAD 171

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                   +      +++   P+++  +Q   Y T   E    +   + +     + I +
Sbjct: 172 YTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKYNIQKATH-ENIAS 227

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + M +    SS+G + L+S+  D   D+Y  D       ++T    I++S  +  D   
Sbjct: 228 SQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPGIDVSGVFLEDDKS 287

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           + F SDR G   +Y+ +       +++  +  ++     +    D + +           
Sbjct: 288 MAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSVVYVSRENLNEFGK 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             F + ++  +    R L  + + Q P +S  GR++++ +K   +    L  +D N
Sbjct: 345 TVFNLNLITLNSKYIRRLTVNGSNQMPRFSMDGRNIMYIKKTPQEYAMGLILLDYN 400


>gi|226228060|ref|YP_002762166.1| hypothetical protein GAU_2654 [Gemmatimonas aurantiaca T-27]
 gi|226091251|dbj|BAH39696.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 338

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 62/273 (22%), Positives = 103/273 (37%), Gaps = 12/273 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           + +   G+    L V   D   +  L   RD     P  S + Q+V Y    +  +   +
Sbjct: 66  TPATGGGVPSLRLMVYHTDSGTVAPLF-GRDIAGGSPSVSADGQRVVYVGESNSTVDYDF 124

Query: 241 --LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERL 297
             L       AP+R+        AP  S NG     +         IY  D++  A   L
Sbjct: 125 QDLWVVMRGAAPRRLALSDGSEHAPSMSPNGALIAYARPNAMMLSHIYVADIEGRAESPL 184

Query: 298 TNTLFIN-----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           +  +         + ++SPD ++++F     G   LY M+ +G+  ++I+     S FD 
Sbjct: 185 SLAMAPGLQYTFATPAWSPDGTRLLFAGGAPGMLHLYTMRVDGTQVQQITNAT-YSDFDG 243

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVM-KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            WSP G  IAF ++      I +        ER     +  + P WSP G  + F     
Sbjct: 244 TWSPDGQTIAFVRYISPNHQILMTRNLVTGAERTFEYANRSRHPAWSPDGTRIAFVSNMS 303

Query: 412 GDTGSKLYSIDLNGRN-ETLINTPAYASDPQWV 443
            +   +LY++  +G     L N       P W+
Sbjct: 304 DNADLELYTVKPDGSALTRLTNDNLTQQHPSWI 336



 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 11/231 (4%)

Query: 175 SRILFVSESVVS-GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            R+++V ES  +       L V+ R GA  R L  S D     P  SPN   +AYA  + 
Sbjct: 108 QRVVYVGESNSTVDYDFQDLWVVMR-GAAPRRLALS-DGSEHAPSMSPNGALIAYARPNA 165

Query: 234 EDILRVYLMDTRID-RAPKRIGNFRSMILA---PRFSSNGKRALISVQKDEAMDIYSVDL 289
             +  +Y+ D      +P  +     +      P +S +G R L +      + +Y++ +
Sbjct: 166 MMLSHIYVADIEGRAESPLSLAMAPGLQYTFATPAWSPDGTRLLFAGGAPGMLHLYTMRV 225

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                +++TN  + +   ++SPD   I F        Q+ + ++  +  +R + +     
Sbjct: 226 DGTQVQQITNATYSDFDGTWSPDGQTIAFVRYISPNHQILMTRNLVTGAER-TFEYANRS 284

Query: 350 FDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNL-QAPTW 397
             P WSP G  IAF           +  +K DGS    L  D+   Q P+W
Sbjct: 285 RHPAWSPDGTRIAFVSNMSDNADLELYTVKPDGSALTRLTNDNLTQQHPSW 335


>gi|241204940|ref|YP_002976036.1| WD40 domain protein beta Propeller [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240858830|gb|ACS56497.1| WD40 domain protein beta Propeller [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 275

 Score =  146 bits (368), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 86/230 (37%), Gaps = 16/230 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L  +  DG  +  +              SPN  ++  +   +     +Y++         
Sbjct: 45  LYRLPLDGGEVVKVDTGFAVNCNNDHGISPNGSEIVISDKTEFGKSAIYILPIEGGTPRL 104

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
              N  S      +S +G++      +D+  DIY++ +   A  RLT+    N    YS 
Sbjct: 105 ITENLPSYWHG--WSPDGRQLAYCGIRDDLFDIYTISVDGGAETRLTHGEGRNDGPDYSA 162

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I F S R G  Q++ +  +G+  ++++ D   ++F    SP  D++    +    F
Sbjct: 163 DGQWIYFNSSRTGLMQIWRVHPDGTGLQQVTSDDYGNWFA-HPSPNNDMVLLLSYDPSVF 221

Query: 372 --------AIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRK 409
                    + +M  DG   + L E       +  P WSP G    + R 
Sbjct: 222 DHPRDLDVRLRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGEEFAYVRY 271



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 86/205 (41%), Gaps = 15/205 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V + + R  RA + +     ++ AP FS +G   L+    +    +Y + L      ++
Sbjct: 4   SVEIYNVRTGRA-REVWQTDKLVEAPNFSPDGSYLLL----NGDGLLYRLPLDGGEVVKV 58

Query: 298 TNTLFINIS--ASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                +N +     SP+ S+IV  SD+   GK  +Y++   G   + I+++  + +    
Sbjct: 59  DTGFAVNCNNDHGISPNGSEIV-ISDKTEFGKSAIYILPIEGGTPRLITENLPSYWHG-- 115

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG 412
           WSP G  +A+     + F I  +  DG  E  L         P +S  G+ + F+  + G
Sbjct: 116 WSPDGRQLAYCGIRDDLFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYFNSSRTG 175

Query: 413 DTGSKLYSIDLNGRNETLINTPAYA 437
               +++ +  +G     + +  Y 
Sbjct: 176 LM--QIWRVHPDGTGLQQVTSDDYG 198



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 15/169 (8%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             ++++     +  T  +  + ++SPD S ++      G   LY +  +G +  ++    
Sbjct: 7   IYNVRTGRAREVWQTDKLVEAPNFSPDGSYLLLN----GDGLLYRLPLDGGEVVKVDTGF 62

Query: 346 EASYFDPV-WSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             +  +    SP G  I  + K    K AI ++  +G   RL+ E+       WSP GR 
Sbjct: 63  AVNCNNDHGISPNGSEIVISDKTEFGKSAIYILPIEGGTPRLITENLPSYWHGWSPDGRQ 122

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           L +   +D      +Y+I ++G  ET +         P Y++D QW+ F
Sbjct: 123 LAYCGIRDD--LFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYF 169



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 192 SLCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATY 231
            L +MD DG N++ L         +  P +SP+ ++ AY  Y
Sbjct: 230 RLRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGEEFAYVRY 271


>gi|116252434|ref|YP_768272.1| TolB-like protein [Rhizobium leguminosarum bv. viciae 3841]
 gi|115257082|emb|CAK08176.1| putative TolB-like protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 275

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 86/230 (37%), Gaps = 16/230 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L  +  DG  +  +              SP+  K+  +   +     +Y +         
Sbjct: 45  LYRLPLDGGEVVKVDTGFAVNCNNDHGISPDGTKIVISDKTEFGKSAIYTLPIEGGTPRL 104

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
              N  S      +S +G++      +D+  DIY++ +   A  RLT+    N    YS 
Sbjct: 105 ITENLPSYWHG--WSPDGRQLAYCGIRDDLFDIYTISVDGGAETRLTHGEGRNDGPDYSA 162

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I F S R G  Q++ +  +G+  ++++ D + ++F    SP  D++    +    F
Sbjct: 163 DGQWIYFNSSRTGLMQIWRIHPDGTGLEQVTSDNQGNWFA-HPSPNNDMVLLLSYDPSVF 221

Query: 372 --------AIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRK 409
                    + +M  DG   + L E       +  P WSP G    + R 
Sbjct: 222 DHPRDLDVRLRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGEEFAYVRY 271



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 84/201 (41%), Gaps = 15/201 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V + + R  RA + +     ++ AP FS +G   L+    +    +Y + L      ++
Sbjct: 4   SVEIYNVRTGRA-REVWQTDRLVEAPNFSPDGSYLLL----NGDGLLYRLPLDGGEVVKV 58

Query: 298 TNTLFINIS--ASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                +N +     SPD ++IV  SD+   GK  +Y +   G   + I+++  + +    
Sbjct: 59  DTGFAVNCNNDHGISPDGTKIV-ISDKTEFGKSAIYTLPIEGGTPRLITENLPSYWHG-- 115

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG 412
           WSP G  +A+     + F I  +  DG  E  L         P +S  G+ + F+  + G
Sbjct: 116 WSPDGRQLAYCGIRDDLFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYFNSSRTG 175

Query: 413 DTGSKLYSIDLNGRNETLINT 433
               +++ I  +G     + +
Sbjct: 176 LM--QIWRIHPDGTGLEQVTS 194



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 15/169 (8%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             ++++     +  T  +  + ++SPD S ++      G   LY +  +G +  ++    
Sbjct: 7   IYNVRTGRAREVWQTDRLVEAPNFSPDGSYLLLN----GDGLLYRLPLDGGEVVKVDTGF 62

Query: 346 EASYFDPV-WSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             +  +    SP G  I  + K    K AI  +  +G   RL+ E+       WSP GR 
Sbjct: 63  AVNCNNDHGISPDGTKIVISDKTEFGKSAIYTLPIEGGTPRLITENLPSYWHGWSPDGRQ 122

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           L +   +D      +Y+I ++G  ET +         P Y++D QW+ F
Sbjct: 123 LAYCGIRDD--LFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYF 169



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 192 SLCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATY 231
            L +MD DG N++ L         +  P +SP+ ++ AY  Y
Sbjct: 230 RLRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGEEFAYVRY 271


>gi|294495630|ref|YP_003542123.1| Periplasmic component of the Tol biopolymer transport system
           [Methanohalophilus mahii DSM 5219]
 gi|292666629|gb|ADE36478.1| Periplasmic component of the Tol biopolymer transport system
           [Methanohalophilus mahii DSM 5219]
          Length = 360

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 105/253 (41%), Gaps = 9/253 (3%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           IY        D++        + ++ +   ++ +MD DG+N   +     +   +P FS 
Sbjct: 31  IYPLTDDFSSDYHYPAWSPDGTQITYMNDKAIWIMDADGSNPHVIYDG-MKWDGDPCFSA 89

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQKD 279
           + + + +A+   +     YL   +++     I          +P  S +G          
Sbjct: 90  DGKDIYFASESRKPYSSTYLNLFKMNVDGSNITQLTDGADRRSPSISPDGSMLAYLSNIA 149

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              DI+ +D+ + +  +LT T       S+SPD  ++++      K+ L++        +
Sbjct: 150 GNYDIWVMDITNKSHRQLTFTSEDEGKPSWSPDGDEVIY----SFKDNLWLTDVEFDKSR 205

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWS 398
           +++     +  DP + P G+ I F    G +  + ++  +  + +LL +D  ++ +P   
Sbjct: 206 QLTHGTS-NDVDPFFLPSGEKIVFISDRGGETNLWLIDTEDDERQLLTDDRKVEYSPAAG 264

Query: 399 PSGRSLIFSRKKD 411
           P G+ ++F  + +
Sbjct: 265 PDGKKIVFGARAN 277



 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 56/258 (21%), Positives = 104/258 (40%), Gaps = 27/258 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           ANI  LT         P +SP+  ++ Y          +++MD      P  I +     
Sbjct: 29  ANIYPLTDDFSSDYHYPAWSPDGTQITYMNDKA-----IWIMDAD-GSNPHVIYDGMKWD 82

Query: 261 LAPRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             P FS++GK    + +         ++++ +++  +   +LT+      S S SPD S 
Sbjct: 83  GDPCFSADGKDIYFASESRKPYSSTYLNLFKMNVDGSNITQLTDG-ADRRSPSISPDGSM 141

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + + S+  G   ++VM       ++++   E     P WSP GD + ++        + +
Sbjct: 142 LAYLSNIAGNYDIWVMDITNKSHRQLTFTSE-DEGKPSWSPDGDEVIYSFKD----NLWL 196

Query: 376 MKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-- 432
              +  + R L    SN   P + PSG  ++F   + G+T   L+ ID       L+   
Sbjct: 197 TDVEFDKSRQLTHGTSNDVDPFFLPSGEKIVFISDRGGET--NLWLIDTEDDERQLLTDD 254

Query: 433 -----TPAYASDPQWVGF 445
                +PA   D + + F
Sbjct: 255 RKVEYSPAAGPDGKKIVF 272



 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 98/204 (48%), Gaps = 10/204 (4%)

Query: 177 ILFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           I F SES         +L  M+ DG+NI  LT   D+    P  SP+   +AY +    +
Sbjct: 94  IYFASESRKPYSSTYLNLFKMNVDGSNITQLTDGADR--RSPSISPDGSMLAYLSNIAGN 151

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +++MD   +++ +++         P +S +G   + S + +    ++  D++ + + 
Sbjct: 152 -YDIWVMDI-TNKSHRQLTFTSEDEGKPSWSPDGDEVIYSFKDN----LWLTDVEFDKSR 205

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +LT+    ++   + P   +IVF SDR G+  L+++ +   +++ ++ D++  Y  P   
Sbjct: 206 QLTHGTSNDVDPFFLPSGEKIVFISDRGGETNLWLIDTEDDERQLLTDDRKVEY-SPAAG 264

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD 379
           P G  I F   + E F + +++ +
Sbjct: 265 PDGKKIVFGARANETFDLWMLEME 288


>gi|153005706|ref|YP_001380031.1| WD40 domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152029279|gb|ABS27047.1| WD40 domain protein beta Propeller [Anaeromyxobacter sp. Fw109-5]
          Length = 357

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 63/290 (21%), Positives = 119/290 (41%), Gaps = 51/290 (17%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F+ R L V ++   G   + L VM  DG+ +R ++  + ++     F P  +++ Y++  
Sbjct: 64  FDGREL-VFQATPEGAGCDQLYVMGADGSGLRRVSRGKGRVTCG-YFFPGGERIVYSSTH 121

Query: 233 --------DEDILRVYLMDTRIDRAPKRIGNFRSMILAP------------RFSSNGKRA 272
                     D  + Y+      +            LAP              S +G   
Sbjct: 122 ASAAECPPKPDHSKGYVWALYDYQLYT--ARPDGSDLAPLAPAPGKYNAEATVSKDG-WI 178

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
           + +  +D  +++Y + L  +   RLT+T   +  A +S D  +IVF +            
Sbjct: 179 VFTSTRDGDLELYKMRLDGSGLVRLTHTPGYDGGAFFSADGRRIVFRASRPTTEAELADY 238

Query: 322 ---------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SG 368
                    R GK +L+ M ++GSD +++++   AS F P + P G  I F        G
Sbjct: 239 RALLGEGLVRPGKLELFTMNADGSDVRQVTRLGAAS-FAPFFHPDGRRIVFASNVGDPRG 297

Query: 369 EKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             F + V+  DG+  ER+   ++    P +SP G+ L+F+  ++     +
Sbjct: 298 RNFDLYVVNDDGTGLERITTNETFDGFPMFSPDGKRLVFASNRNASRPGE 347



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/288 (18%), Positives = 90/288 (31%), Gaps = 48/288 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N+R LT   +       FS + +++ +    +        +        +R+   +  +
Sbjct: 46  GNVRQLTFGGENAEAY--FSFDGRELVFQATPEGAGCDQLYVMGADGSGLRRVSRGKGRV 103

Query: 261 LAPRFSSNGKRALISVQKDEA-------------------MDIYSVDLQSNATERLTNTL 301
               F   G+R + S     A                     +Y+     +    L    
Sbjct: 104 TCGYFFPGGERIVYSSTHASAAECPPKPDHSKGYVWALYDYQLYTARPDGSDLAPLAPAP 163

Query: 302 F-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              N  A+ S D   IVF S R+G  +LY M+ +GS   R++           +S  G  
Sbjct: 164 GKYNAEATVSKDG-WIVFTSTRDGDLELYKMRLDGSGLVRLTH-TPGYDGGAFFSADGRR 221

Query: 361 IAFTK--------------------FSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSP 399
           I F                          K  +  M  DGS  R +        AP + P
Sbjct: 222 IVFRASRPTTEAELADYRALLGEGLVRPGKLELFTMNADGSDVRQVTRLGAASFAPFFHP 281

Query: 400 SGRSLIFSRKKDGDTGSK--LYSIDLNGRN-ETLINTPAYASDPQWVG 444
            GR ++F+       G    LY ++ +G   E +     +   P +  
Sbjct: 282 DGRRIVFASNVGDPRGRNFDLYVVNDDGTGLERITTNETFDGFPMFSP 329


>gi|87311184|ref|ZP_01093307.1| Periplasmic component of the Tol biopolymer transport system
           [Blastopirellula marina DSM 3645]
 gi|87286092|gb|EAQ78003.1| Periplasmic component of the Tol biopolymer transport system
           [Blastopirellula marina DSM 3645]
          Length = 343

 Score =  145 bits (367), Expect = 9e-33,   Method: Composition-based stats.
 Identities = 55/272 (20%), Positives = 98/272 (36%), Gaps = 47/272 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + + Y     +               P  I   R       FS + K+ + +   
Sbjct: 42  FSPDGKTIVYQAVPPQYPFYQIYTQPLSGGEPTLISTGRGRTTCAYFSPDAKQIMFASSH 101

Query: 279 --------------------------------DEAMDIYSVDLQSNATERLTNTLFINIS 306
                                           D   DI++ DL+S     LT     +  
Sbjct: 102 LDPMLTETEQAEIAQQEADRKSGTRRRYSWDFDPYTDIFAKDLKSGELTPLTTEKGYDAE 161

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +Y+ D ++I F SDR+G   +Y+M ++G++QK+++ D +     P  SP G  I F   
Sbjct: 162 GAYNKDGTKIAFCSDRDGDPDIYIMDADGTNQKQLT-DAKGYDGGPFISPNGKWIVFRSD 220

Query: 367 SGEK--FAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFS---RKKDGDTGSKLYS 420
             E+    I V+  DG  E  L ++     AP W P+   +I++     + G     L+ 
Sbjct: 221 RKEEGFLQIYVIGVDGQHETALTDNVGVNWAPYWHPTEPYIIWAGADHSQPGRPNYDLWL 280

Query: 421 IDLN--------GRNETLINTPAYASDPQWVG 444
           +           G+   + ++ A    P +  
Sbjct: 281 MKYEETVDAIKPGKVWRITDSAAADVLPVFSP 312



 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 51/300 (17%), Positives = 107/300 (35%), Gaps = 50/300 (16%)

Query: 170 KGDFN-SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           +G F+      V ++V        +      G     ++  R +      FSP+ +++ +
Sbjct: 39  EGYFSPDGKTIVYQAVPPQYPFYQIYTQPLSGGEPTLISTGRGRTTCA-YFSPDAKQIMF 97

Query: 229 -------------------------------ATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
                                           ++D +    ++  D +       +   +
Sbjct: 98  ASSHLDPMLTETEQAEIAQQEADRKSGTRRRYSWDFDPYTDIFAKDLKSGELT-PLTTEK 156

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                  ++ +G +      +D   DIY +D      ++LT+    +     SP+   IV
Sbjct: 157 GYDAEGAYNKDGTKIAFCSDRDGDPDIYIMDADGTNQKQLTDAKGYDGGPFISPNGKWIV 216

Query: 318 FESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----TKFSGE-K 370
           F SDR  EG  Q+YV+  +G  +  ++ +   ++  P W P    I +        G   
Sbjct: 217 FRSDRKEEGFLQIYVIGVDGQHETALTDNVGVNW-APYWHPTEPYIIWAGADHSQPGRPN 275

Query: 371 FAIGVMKKD--------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           + + +MK +        G   R+    +    P +SP G+ L+++  +  D  S+L+  D
Sbjct: 276 YDLWLMKYEETVDAIKPGKVWRITDSAAADVLPVFSPDGKQLMWTSTRTDDHSSQLFIAD 335



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 64/196 (32%), Gaps = 45/196 (22%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASY 349
           +   ++T+ +       +SPD   IV+++        Q+Y    +G +   IS       
Sbjct: 25  SNVRQVTSGMVKAGEGYFSPDGKTIVYQAVPPQYPFYQIYTQPLSGGEPTLIST-GRGRT 83

Query: 350 FDPVWSPQGDLIAFTK-------FSGEKFAIGVMKKD---GSQER--------------- 384
               +SP    I F            E+  I   + D   G++ R               
Sbjct: 84  TCAYFSPDAKQIMFASSHLDPMLTETEQAEIAQQEADRKSGTRRRYSWDFDPYTDIFAKD 143

Query: 385 --------LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN---- 432
                   L  E        ++  G  + F   +DGD    +Y +D +G N+  +     
Sbjct: 144 LKSGELTPLTTEKGYDAEGAYNKDGTKIAFCSDRDGD--PDIYIMDADGTNQKQLTDAKG 201

Query: 433 ---TPAYASDPQWVGF 445
               P  + + +W+ F
Sbjct: 202 YDGGPFISPNGKWIVF 217


>gi|256823743|ref|YP_003147706.1| WD40 domain-containing protein beta Propeller [Kangiella koreensis
           DSM 16069]
 gi|256797282|gb|ACV27938.1| WD40 domain protein beta Propeller [Kangiella koreensis DSM 16069]
          Length = 1068

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 31/209 (14%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +GK        D   DIY++ +       +TN++  ++   +SP+  Q+ F +D+ G
Sbjct: 58  VSPDGKTIAF----DMLGDIYTMPMSGGKATNITNSMAWDMQPRFSPNGQQLAFTTDQGG 113

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKF----AIGVMKKD 379
            + ++VM S+GSDQ +++++      +PVWSP G+ IA    F+G +      I +  K 
Sbjct: 114 GDNIWVMDSDGSDQYQVTKESFRLLNNPVWSPDGNYIAARKHFTGTRSLGAGEIWLYHKS 173

Query: 380 GSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLYSIDL---- 423
           G     L +  N Q     P ++P G+ ++FSR            D+  ++Y +      
Sbjct: 174 GGSGVQLNKRPNEQKDLGEPAFTPDGKYVLFSRDSTPGSYFEYSKDSNEQIYEVFAINRE 233

Query: 424 NGRNETLINTPAYA------SDPQWVGFM 446
            G  ET I+ P  A       D +++ F+
Sbjct: 234 TGDIETWIDGPGGAVRPTPSPDGKFIAFV 262



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 87/221 (39%), Gaps = 28/221 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +A+    D     +Y M          I N  +  + PRFS NG++   +  + 
Sbjct: 59  SPDGKTIAFDMLGD-----IYTMPM-SGGKATNITNSMAWDMQPRFSPNGQQLAFTTDQG 112

Query: 280 EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVMQS 333
              +I+ +D   +   ++T   F +  +  +SPD + I     F   R  G  ++++   
Sbjct: 113 GGDNIWVMDSDGSDQYQVTKESFRLLNNPVWSPDGNYIAARKHFTGTRSLGAGEIWLYHK 172

Query: 334 NGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEK-------------FAIGVMKK 378
           +G    ++    +++    +P ++P G  + F++ S                + +  + +
Sbjct: 173 SGGSGVQLNKRPNEQKDLGEPAFTPDGKYVLFSRDSTPGSYFEYSKDSNEQIYEVFAINR 232

Query: 379 DGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +       ++       PT SP G+ + F R+    +   L
Sbjct: 233 ETGDIETWIDGPGGAVRPTPSPDGKFIAFVRRIRAQSALFL 273



 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 106/303 (34%), Gaps = 40/303 (13%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I+  I   +G + +  +      ++  +   +  M   G     +T S      +PRFSP
Sbjct: 42  IFADIQVNEGTWMNLDVSPDGKTIAFDMLGDIYTMPMSGGKATNITNS-MAWDMQPRFSP 100

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQ 277
           N Q++A+ T D      +++MD+      +       ++  P +S +G         +  
Sbjct: 101 NGQQLAFTT-DQGGGDNIWVMDSDGSDQYQVTKESFRLLNNPVWSPDGNYIAARKHFTGT 159

Query: 278 KD-EAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDR----------E 323
           +   A +I+       +  +L             +++PD   ++F  D           +
Sbjct: 160 RSLGAGEIWLYHKSGGSGVQLNKRPNEQKDLGEPAFTPDGKYVLFSRDSTPGSYFEYSKD 219

Query: 324 GKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             EQ+Y + +   +   I    D       P  SP G  IAF +    + A+ +  ++  
Sbjct: 220 SNEQIYEVFAINRETGDIETWIDGPGGAVRPTPSPDGKFIAFVRRIRAQSALFLKDRETG 279

Query: 382 QERLLVED------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            E  + E                    W+P    ++F  +       KL+ ID+  +  T
Sbjct: 280 AEFPIYEGLERDMQETWAIHGVYPNFAWTPDSDEIVFWAQ------GKLHKIDVASKEVT 333

Query: 430 LIN 432
            I 
Sbjct: 334 NIP 336



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 61/329 (18%), Positives = 110/329 (33%), Gaps = 69/329 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YAT 230
            ++ F ++          + VMD DG++   +T    ++L  P +SP+   +A    +  
Sbjct: 103 QQLAFTTDQGGGDN----IWVMDSDGSDQYQVTKESFRLLNNPVWSPDGNYIAARKHFTG 158

Query: 231 YDDEDILRVYLMDTRIDRAPK--RIGNFRSMILAPRFSSNGKRALIS----------VQK 278
                   ++L         +  +  N +  +  P F+ +GK  L S            K
Sbjct: 159 TRSLGAGEIWLYHKSGGSGVQLNKRPNEQKDLGEPAFTPDGKYVLFSRDSTPGSYFEYSK 218

Query: 279 DEAMDIY---SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           D    IY   +++ ++   E   +     +  + SPD   I F      +  L++     
Sbjct: 219 DSNEQIYEVFAINRETGDIETWIDGPGGAVRPTPSPDGKFIAFVRRIRAQSALFLKDRET 278

Query: 336 SDQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-------- 377
             +  I          +      Y +  W+P  D I F    G+   I V          
Sbjct: 279 GAEFPIYEGLERDMQETWAIHGVYPNFAWTPDSDEIVFWAQ-GKLHKIDVASKEVTNIPF 337

Query: 378 --KDGSQERLLVED--------SNLQAPTW---SPSGRSLIFSRKKDGDTGSKLYSIDL- 423
             KD  + R  V           N +   W   SP G   IF          K+YS+ L 
Sbjct: 338 EVKDRREMRQAVTQKNAAYEAKFNAKMLRWLQVSPDGDQAIF------QALGKIYSMSLP 391

Query: 424 NGRNETLINT-------PAYASDPQWVGF 445
           NG+ + L          P +++D   + +
Sbjct: 392 NGKPKRLTRQDEHFEFYPRFSADGSKIVY 420



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 52/264 (19%), Positives = 98/264 (37%), Gaps = 43/264 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-------------- 263
            ++P+  ++ +  +    + ++ +    +   P  + + R M  A               
Sbjct: 306 AWTPDSDEIVF--WAQGKLHKIDVASKEVTNIPFEVKDRREMRQAVTQKNAAYEAKFNAK 363

Query: 264 --RF---SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIV 317
             R+   S +G +A+          IYS+ L +   +RLT           +S D S+IV
Sbjct: 364 MLRWLQVSPDGDQAIFQA----LGKIYSMSLPNGKPKRLTRQDEHFEFYPRFSADGSKIV 419

Query: 318 FES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           + + D +    + ++ S G   K +S ++   Y +P  SP G+ +     SG      + 
Sbjct: 420 YTTWDDKTLGTIRIVSSRGGSGKVVS-EQPGHYTNPSLSPDGETVVAQAISGGYLTSPLY 478

Query: 377 KKDGS-------QERLLVEDSNLQAPTWSPSGRSLIFSRK--KDGDTGSKLYSIDLNGRN 427
            +D          ++  V       P ++ S   + FS+         SKL S DL+G  
Sbjct: 479 SQDTGIIAINLDDDKQYVLSKRGSNPFFAGSSSRVFFSQTTPSGETYSSKLVSTDLSGNE 538

Query: 428 ETLINTPAYASD----P--QWVGF 445
                   + SD    P  QW+ F
Sbjct: 539 MQEHYEGNWISDFTVSPDQQWLAF 562



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 9/105 (8%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSG 401
           Q  E ++ +   SP G  IAF         I  M   G +   +    +    P +SP+G
Sbjct: 47  QVNEGTWMNLDVSPDGKTIAFDMLGD----IYTMPMSGGKATNITNSMAWDMQPRFSPNG 102

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
           + L F+  + G  G  ++ +D +G ++  +   ++   ++P W  
Sbjct: 103 QQLAFTTDQGG--GDNIWVMDSDGSDQYQVTKESFRLLNNPVWSP 145



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 90/254 (35%), Gaps = 43/254 (16%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + LT   +   F PRFS +  K+ Y T+DD+ +  + ++ +R   + K +         
Sbjct: 395 PKRLTRQDEHFEFYPRFSADGSKIVYTTWDDKTLGTIRIVSSR-GGSGKVVSEQPGHYTN 453

Query: 263 PRFSSNGKRALISVQKDEAMD---------IYSVDLQSNATERLTNTLFINISASYSPDS 313
           P  S +G+  +        +          I +++L  +    L+          ++  S
Sbjct: 454 PSLSPDGETVVAQAISGGYLTSPLYSQDTGIIAINLDDDKQYVLSKRGSN---PFFAGSS 510

Query: 314 SQIVFE----SDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
           S++ F     S      +L     +G++ +   +  E ++  D   SP    +AFT+   
Sbjct: 511 SRVFFSQTTPSGETYSSKLVSTDLSGNEMQ---EHYEGNWISDFTVSPDQQWLAFTQR-- 565

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP------------TWSPSGRSLIFSRKKDGDTGS 416
             + + V     S + +         P             WS   +SL +S       G 
Sbjct: 566 --YQVYVTPFVQSGKAINTGPGANNLPVRKFSKFAGSNLAWSEDSKSLAWS------LGP 617

Query: 417 KLYSIDLNGRNETL 430
            LY   L  R E L
Sbjct: 618 DLYQQALTDRFEFL 631



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 160 DDIYQSITGEKG-----DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           DD  Q +  ++G       +S  +F S++  SG    S  ++  D +            +
Sbjct: 490 DDDKQYVLSKRGSNPFFAGSSSRVFFSQTTPSGET-YSSKLVSTDLSGNEMQEHYEGNWI 548

Query: 215 FEPRFSPNQQKVAYATYDD-------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +   SP+QQ +A+            +    +       +   ++   F    LA  +S 
Sbjct: 549 SDFTVSPDQQWLAFTQRYQVYVTPFVQSGKAINTGPGANNLPVRKFSKFAGSNLA--WSE 606

Query: 268 NGKRALISVQKD 279
           + K    S+  D
Sbjct: 607 DSKSLAWSLGPD 618


>gi|114331371|ref|YP_747593.1| WD40 domain-containing protein [Nitrosomonas eutropha C91]
 gi|114308385|gb|ABI59628.1| WD40 domain protein beta Propeller [Nitrosomonas eutropha C91]
          Length = 369

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 72/341 (21%), Positives = 133/341 (39%), Gaps = 70/341 (20%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           + D KQ+ G++  S    +R                     +   L     V        
Sbjct: 38  ITDAKQVSGQEVRSGEGYYRA--------------------DGNWLVYQAEVAGENPFYQ 77

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + +    N++ ++P   +        P+Q+KV +++  D+   +  ++     R    
Sbjct: 78  IYLKNLANENVQQISPGIGKTTCS-WVHPSQEKVLFSSTHDDPEAKAKMVAEIEQRKS-- 134

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                           G+R   +   DE  DIY  D +    + LTNT   +  AS+SPD
Sbjct: 135 ----------------GQRRAYAWDYDEFYDIYEADFEGKNIKNLTNTKGYDAEASWSPD 178

Query: 313 SSQIVFESDREGKEQ-------------------LYVMQSNGSDQKRISQDKEASYFDPV 353
              I F S+R    +                   +Y+M ++GS+ KR++         P 
Sbjct: 179 GKLIAFASNRRAYSEPLTEEETALFNNNPSSLIDIYIMDADGSNVKRLTH-TNRYDGGPF 237

Query: 354 WSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKK 410
           +SP G  I + +FS  G++  I  M  DGS ++ L   + +  AP + PS + +IF+   
Sbjct: 238 FSPDGKRIVWRRFSENGQEAEIFTMNIDGSDQKQLTRLNKMSWAPFYHPSNQYIIFAANV 297

Query: 411 DGDTGSKLYSIDLNGRNETLINT--------PAYASDPQWV 443
           +G    +LY +D++ + E +  T        P +  D Q++
Sbjct: 298 EGHRNFELYVVDVDSKKEPVRVTEEEGFDGLPVFTPDGQYI 338



 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 96/223 (43%), Gaps = 28/223 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--- 278
           + Q+ AYA +D ++   +Y  D    +  K + N +       +S +GK    +  +   
Sbjct: 134 SGQRRAYA-WDYDEFYDIYEADFE-GKNIKNLTNTKGYDAEASWSPDGKLIAFASNRRAY 191

Query: 279 ----------------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--S 320
                              +DIY +D   +  +RLT+T   +    +SPD  +IV+   S
Sbjct: 192 SEPLTEEETALFNNNPSSLIDIYIMDADGSNVKRLTHTNRYDGGPFFSPDGKRIVWRRFS 251

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKK 378
           +   + +++ M  +GSDQK++++  + S+  P + P    I F         F + V+  
Sbjct: 252 ENGQEAEIFTMNIDGSDQKQLTRLNKMSW-APFYHPSNQYIIFAANVEGHRNFELYVVDV 310

Query: 379 DGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           D  +E  R+  E+     P ++P G+ + ++  +  D    L+
Sbjct: 311 DSKKEPVRVTEEEGFDGLPVFTPDGQYITWTSDRTPDKKGHLF 353



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 78/191 (40%), Gaps = 10/191 (5%)

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           K +   K + + ASW      I+    +    E        LF      +      + +M
Sbjct: 161 KNLTNTKGYDAEASWSPDGKLIAFASNRRAYSEPLTEEETALF----NNNPSSLIDIYIM 216

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGN 255
           D DG+N++ LT + ++    P FSP+ +++ +  + ++     ++ M+       K++  
Sbjct: 217 DADGSNVKRLTHT-NRYDGGPFFSPDGKRIVWRRFSENGQEAEIFTMNID-GSDQKQLTR 274

Query: 256 FRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNA-TERLTNTLFINISASYSPD 312
              M  AP +  + +  + +   +     ++Y VD+ S     R+T     +    ++PD
Sbjct: 275 LNKMSWAPFYHPSNQYIIFAANVEGHRNFELYVVDVDSKKEPVRVTEEEGFDGLPVFTPD 334

Query: 313 SSQIVFESDRE 323
              I + SDR 
Sbjct: 335 GQYITWTSDRT 345


>gi|125588578|gb|EAZ29242.1| hypothetical protein OsJ_13305 [Oryza sativa Japonica Group]
          Length = 688

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 75/392 (19%), Positives = 140/392 (35%), Gaps = 65/392 (16%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
            P     F    S GA  LV     + G D   +E  + DV    +     +F       
Sbjct: 281 TPPGFHAFTPAASPGAPGLVAVATRRAGSDYRHIE--VIDVSSDGK---NAYFEVTRPVA 335

Query: 153 KIAHTISDDIYQ-----SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
              H  +  I            +G  N     + E++ S    ++  +   DG+      
Sbjct: 336 PRVHHFNPFISPDGARVGYHRCRGRGNGDSPLLLENIKSPGSPDTFSLFRIDGS------ 389

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                    P FS + +K+A+       +  +Y++++      ++I  F     +  +  
Sbjct: 390 --------FPSFSHDGKKIAFV-----GLPGMYVVNSDGSGGRRKI--FSGNAFSTSWDW 434

Query: 268 NGKRALISVQK-DEAMDIYSVDL-----------QSNATERLTNTLFINISASYSPDSSQ 315
             K  + +    D A +   VD+            + + ++LT     N   S SPD   
Sbjct: 435 KRKGVVYTSIGPDFASETTEVDVVAISLGDDDDESTISMKKLTVGGENNAFPSPSPDGKW 494

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS----GE 369
           +VF S R G + LY++ +   +   I +  E  + D    WSP G+ IAF          
Sbjct: 495 VVFRSGRSGNKNLYIIDAEDGEAGGIRRLTEGPWSDTMCNWSPDGEWIAFASDRHAPGSG 554

Query: 370 KFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDG------------DT 414
            FAI ++  +G+  R +V          P +SP  +SL+F+                   
Sbjct: 555 SFAIYMVHPNGTGLRRVVHSGGSGRTNHPWFSPDSKSLVFTSDYAAVSAEPVSNPHHYQP 614

Query: 415 GSKLYSIDLNGRNETLINTPAY-ASDPQWVGF 445
             +++++D++G N   +   ++    P W  +
Sbjct: 615 YGEIFTVDIDGSNIRRLTHNSFEDGTPSWTPY 646



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 83/228 (36%), Gaps = 48/228 (21%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL------------TN 299
           R+ +  S+     F+      L   +++ ++++Y   + S+  E L            T 
Sbjct: 63  RLTDGVSVNYNGNFAPASDSILFVSERNGSLNLYLSPVPSSRREALESASSSSSSAAATI 122

Query: 300 TLFINIS-------ASYSPDSSQIVFESD-------REGKEQLYVMQSNGSDQKRISQDK 345
           +  +           S +PD S++V+ S        R     +Y  + +    +R++   
Sbjct: 123 SPLLPWEPIALKDRPSLTPDGSRLVYVSTAVPAAEPRSSWAAVYSTELSTGRTRRLTPLG 182

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF---------AIGVMK-KDGSQERLLVEDSNLQAP 395
            A  F P  SP G+  A        +          I V +  DGS+  L + D     P
Sbjct: 183 VA-DFSPAVSPSGEWTAAASPGAAGWSGEVEDLRTDIYVFRTADGSRRSLAIRDGGW--P 239

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLY----SIDLNG---RNETLINTPAY 436
           +W+    ++ F R +D D    +Y    S+  +G    +   I  P +
Sbjct: 240 SWA-DETTVFFHR-RDSDGWYGVYRAEISVTGDGVEAASVERITPPGF 285



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 84/267 (31%), Gaps = 51/267 (19%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---- 262
                 + +   F+P    + + +  +   L +YL      R         S   A    
Sbjct: 64  LTDGVSVNYNGNFAPASDSILFVSERNGS-LNLYLSPVPSSRREALESASSSSSSAAATI 122

Query: 263 --------------PRFSSNGKRALISVQ-------KDEAMDIYSVDLQSNATERLTNTL 301
                         P  + +G R +           +     +YS +L +  T RLT   
Sbjct: 123 SPLLPWEPIALKDRPSLTPDGSRLVYVSTAVPAAEPRSSWAAVYSTELSTGRTRRLTPLG 182

Query: 302 FINISASYSPDSSQIVFES----DREG-----KEQLYVMQSNGSDQKRISQDKEASYFDP 352
             + S + SP        S       G     +  +YV ++    ++ ++         P
Sbjct: 183 VADFSPAVSPSGEWTAAASPGAAGWSGEVEDLRTDIYVFRTADGSRRSLAIRDGG---WP 239

Query: 353 VWSPQGDLIAFTKFSGEKFAIGV----MKKDG----SQERLLVEDSNLQAPTWSPSG--R 402
            W+ +  +    + S   + +      +  DG    S ER+     +   P  SP G   
Sbjct: 240 SWADETTVFFHRRDSDGWYGVYRAEISVTGDGVEAASVERITPPGFHAFTPAASP-GAPG 298

Query: 403 SLIFSRKKDGDTGSKLYSIDL--NGRN 427
            +  + ++ G     +  ID+  +G+N
Sbjct: 299 LVAVATRRAGSDYRHIEVIDVSSDGKN 325



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 57/181 (31%), Gaps = 36/181 (19%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD---- 351
           RLT+ + +N + +++P S  I+F S+R G   LY+     S ++ +     +S       
Sbjct: 63  RLTDGVSVNYNGNFAPASDSILFVSERNGSLNLYLSPVPSSRREALESASSSSSSAAATI 122

Query: 352 --------------PVWSPQGDLIAFTKF-------SGEKFAIGVMKKDGSQERLLVEDS 390
                         P  +P G  + +               A+   +    + R L    
Sbjct: 123 SPLLPWEPIALKDRPSLTPDGSRLVYVSTAVPAAEPRSSWAAVYSTELSTGRTRRLTPLG 182

Query: 391 -NLQAPTWSPSGRSLIFSRKKDGDTGSK-------LYSI-DLNGRNETLINTPAYASDPQ 441
               +P  SPSG     +         +       +Y     +G   +L         P 
Sbjct: 183 VADFSPAVSPSGEWTAAASPGAAGWSGEVEDLRTDIYVFRTADGSRRSLAIRDG--GWPS 240

Query: 442 W 442
           W
Sbjct: 241 W 241


>gi|115456491|ref|NP_001051846.1| Os03g0840200 [Oryza sativa Japonica Group]
 gi|50428662|gb|AAT77013.1| putative F8K7.10 protein [Oryza sativa Japonica Group]
 gi|108712007|gb|ABF99802.1| WD40-like Beta Propeller Repeat family protein, expressed [Oryza
           sativa Japonica Group]
 gi|113550317|dbj|BAF13760.1| Os03g0840200 [Oryza sativa Japonica Group]
 gi|215695413|dbj|BAG90604.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215713452|dbj|BAG94589.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 688

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 75/392 (19%), Positives = 140/392 (35%), Gaps = 65/392 (16%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
            P     F    S GA  LV     + G D   +E  + DV    +     +F       
Sbjct: 281 TPPGFHAFTPAASPGAPGLVAVATRRAGSDYRHIE--VIDVSSDGK---NAYFEVTRPVA 335

Query: 153 KIAHTISDDIYQ-----SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
              H  +  I            +G  N     + E++ S    ++  +   DG+      
Sbjct: 336 PRVHHFNPFISPDGARVGYHRCRGRGNGDSPLLLENIKSPGSPDTFSLFRIDGS------ 389

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                    P FS + +K+A+       +  +Y++++      ++I  F     +  +  
Sbjct: 390 --------FPSFSHDGKKIAFV-----GLPGMYVVNSDGSGGRRKI--FSGNAFSTSWDW 434

Query: 268 NGKRALISVQK-DEAMDIYSVDL-----------QSNATERLTNTLFINISASYSPDSSQ 315
             K  + +    D A +   VD+            + + ++LT     N   S SPD   
Sbjct: 435 KRKGVVYTSIGPDFASETTEVDVVAISLGDDDDESTISMKKLTVGGENNAFPSPSPDGKW 494

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS----GE 369
           +VF S R G + LY++ +   +   I +  E  + D    WSP G+ IAF          
Sbjct: 495 VVFRSGRSGNKNLYIIDAEDGEAGGIRRLTEGPWSDTMCNWSPDGEWIAFASDRHAPGSG 554

Query: 370 KFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDG------------DT 414
            FAI ++  +G+  R +V          P +SP  +SL+F+                   
Sbjct: 555 SFAIYMVHPNGTGLRRVVHSGGSGRTNHPWFSPDSKSLVFTSDYAAVSAEPVSNPHHYQP 614

Query: 415 GSKLYSIDLNGRNETLINTPAY-ASDPQWVGF 445
             +++++D++G N   +   ++    P W  +
Sbjct: 615 YGEIFTVDIDGSNIRRLTHNSFEDGTPSWTPY 646



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 83/228 (36%), Gaps = 48/228 (21%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL------------TN 299
           R+ +  S+     F+      L   +++ ++++Y   + S+  E L            T 
Sbjct: 63  RLTDGVSVNYNGNFAPASDSILFVSERNGSLNLYLSPVPSSRREALESASSSSSSAAATI 122

Query: 300 TLFINIS-------ASYSPDSSQIVFESD-------REGKEQLYVMQSNGSDQKRISQDK 345
           +  +           S +PD S++V+ S        R     +Y  + +    +R++   
Sbjct: 123 SPLLPWEPIALKDRPSLTPDGSRLVYVSTAVPAAEPRSSWAAVYSTELSTGRTRRLTPLG 182

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF---------AIGVMK-KDGSQERLLVEDSNLQAP 395
            A  F P  SP G+  A        +          I V +  DGS+  L + D     P
Sbjct: 183 VA-DFSPAVSPSGEWTAAASPGAAGWSGEVEDLRTDIYVFRTADGSRRSLAIRDGGW--P 239

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLY----SIDLNG---RNETLINTPAY 436
           +W+    ++ F R +D D    +Y    S+  +G    +   I  P +
Sbjct: 240 SWA-DETTVFFHR-RDSDGWYGVYRAEISVTGDGVEAASVERITPPGF 285



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 84/267 (31%), Gaps = 51/267 (19%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---- 262
                 + +   F+P    + + +  +   L +YL      R         S   A    
Sbjct: 64  LTDGVSVNYNGNFAPASDSILFVSERNGS-LNLYLSPVPSSRREALESASSSSSSAAATI 122

Query: 263 --------------PRFSSNGKRALISVQ-------KDEAMDIYSVDLQSNATERLTNTL 301
                         P  + +G R +           +     +YS +L +  T RLT   
Sbjct: 123 SPLLPWEPIALKDRPSLTPDGSRLVYVSTAVPAAEPRSSWAAVYSTELSTGRTRRLTPLG 182

Query: 302 FINISASYSPDSSQIVFES----DREG-----KEQLYVMQSNGSDQKRISQDKEASYFDP 352
             + S + SP        S       G     +  +YV ++    ++ ++         P
Sbjct: 183 VADFSPAVSPSGEWTAAASPGAAGWSGEVEDLRTDIYVFRTADGSRRSLAIRDGG---WP 239

Query: 353 VWSPQGDLIAFTKFSGEKFAIGV----MKKDG----SQERLLVEDSNLQAPTWSPSG--R 402
            W+ +  +    + S   + +      +  DG    S ER+     +   P  SP G   
Sbjct: 240 SWADETTVFFHRRDSDGWYGVYRAEISVTGDGVEAASVERITPPGFHAFTPAASP-GAPG 298

Query: 403 SLIFSRKKDGDTGSKLYSIDL--NGRN 427
            +  + ++ G     +  ID+  +G+N
Sbjct: 299 LVAVATRRAGSDYRHIEVIDVSSDGKN 325



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 57/181 (31%), Gaps = 36/181 (19%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD---- 351
           RLT+ + +N + +++P S  I+F S+R G   LY+     S ++ +     +S       
Sbjct: 63  RLTDGVSVNYNGNFAPASDSILFVSERNGSLNLYLSPVPSSRREALESASSSSSSAAATI 122

Query: 352 --------------PVWSPQGDLIAFTKF-------SGEKFAIGVMKKDGSQERLLVEDS 390
                         P  +P G  + +               A+   +    + R L    
Sbjct: 123 SPLLPWEPIALKDRPSLTPDGSRLVYVSTAVPAAEPRSSWAAVYSTELSTGRTRRLTPLG 182

Query: 391 -NLQAPTWSPSGRSLIFSRKKDGDTGSK-------LYSI-DLNGRNETLINTPAYASDPQ 441
               +P  SPSG     +         +       +Y     +G   +L         P 
Sbjct: 183 VADFSPAVSPSGEWTAAASPGAAGWSGEVEDLRTDIYVFRTADGSRRSLAIRDG--GWPS 240

Query: 442 W 442
           W
Sbjct: 241 W 241


>gi|108763117|ref|YP_628358.1| WD-40-like repeat-containing amidohydrolase [Myxococcus xanthus DK
           1622]
 gi|108466997|gb|ABF92182.1| WD40-like repeat/amidohydrolase domain protein [Myxococcus xanthus
           DK 1622]
          Length = 1057

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 25/206 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               +    S  G   +  +  D    IY + +     + LT+ +  ++   +SPD  +I
Sbjct: 17  EGTWMNVDVSPRGDEIVFDLLGD----IYVLPMGGGEAKALTSGVAWDMQPRFSPDGKRI 72

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKF 371
           VF SDR G + ++V+  +GS+ + ++++K      P WSP G  I        + S    
Sbjct: 73  VFTSDRGGGDNIWVVDRDGSNARAVTEEKFRLLNSPAWSPDGQFIVARKHFTARRSLGAG 132

Query: 372 AIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLY 419
            + +  + G +   L E +N Q     P +SP GR + FS+          + D   ++Y
Sbjct: 133 EVWMYHRAGGEGVQLTERTNDQKDLGEPAFSPDGRHVYFSQDVSPGKSFEYNKDPNGQIY 192

Query: 420 SI---DLNGRN-ETLINTPAYASDPQ 441
           +I   DL  +  E  I  P  A  P 
Sbjct: 193 AIQRLDLETKEIEPFITGPGGAIRPT 218



 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 94/234 (40%), Gaps = 30/234 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP   ++ +      D+L    +        K + +  +  + PRFS +GKR + +  + 
Sbjct: 26  SPRGDEIVF------DLLGDIYVLPMGGGEAKALTSGVAWDMQPRFSPDGKRIVFTSDRG 79

Query: 280 EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVMQS 333
              +I+ VD   +    +T   F +  S ++SPD   IV    F + R  G  ++++   
Sbjct: 80  GGDNIWVVDRDGSNARAVTEEKFRLLNSPAWSPDGQFIVARKHFTARRSLGAGEVWMYHR 139

Query: 334 NGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKF-------------SGEKFAIGVMKK 378
            G +  ++++         +P +SP G  + F++              +G+ +AI  +  
Sbjct: 140 AGGEGVQLTERTNDQKDLGEPAFSPDGRHVYFSQDVSPGKSFEYNKDPNGQIYAIQRLDL 199

Query: 379 DGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +  + E  +        PT S  G+ L F R+      S LY  D+    E  +
Sbjct: 200 ETKEIEPFITGPGGAIRPTPSRDGKQLAFVRRV--RAKSVLYVTDVASGAERPL 251



 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 52/295 (17%), Positives = 104/295 (35%), Gaps = 40/295 (13%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +      +   +   + V+   G   + LT S      +PRFSP+ +++ + 
Sbjct: 17  EGTWMNVDVSPRGDEIVFDLLGDIYVLPMGGGEAKALT-SGVAWDMQPRFSPDGKRIVFT 75

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           + D      ++++D     A         ++ +P +S +G+  +     + ++   A ++
Sbjct: 76  S-DRGGGDNIWVVDRDGSNARAVTEEKFRLLNSPAWSPDGQFIVARKHFTARRSLGAGEV 134

Query: 285 YSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNG--SDQ 338
           +          +L   TN        ++SPD   + F  D   GK   Y    NG     
Sbjct: 135 WMYHRAGGEGVQLTERTNDQKDLGEPAFSPDGRHVYFSQDVSPGKSFEYNKDPNGQIYAI 194

Query: 339 KRISQD---------KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +R+  +                P  S  G  +AF +    K  + V       ER L + 
Sbjct: 195 QRLDLETKEIEPFITGPGGAIRPTPSRDGKQLAFVRRVRAKSVLYVTDVASGAERPLYDG 254

Query: 390 ------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                              W+P  ++++F        G KL+ ID+  +  T I 
Sbjct: 255 LDRDMQETWAIHGVYPGMAWTPDNKAIVFWA------GGKLHRIDVATKKVTPIA 303



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 10/118 (8%)

Query: 331 MQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           M + G   ++++ D  E ++ +   SP+GD I F         I V+   G + + L   
Sbjct: 1   MDAPGFPARQVNIDVTEGTWMNVDVSPRGDEIVFDLLGD----IYVLPMGGGEAKALTSG 56

Query: 390 -SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
            +    P +SP G+ ++F+  + G  G  ++ +D +G N   +    +   + P W  
Sbjct: 57  VAWDMQPRFSPDGKRIVFTSDRGG--GDNIWVVDRDGSNARAVTEEKFRLLNSPAWSP 112



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 66/336 (19%), Positives = 111/336 (33%), Gaps = 60/336 (17%)

Query: 161 DIYQSITGEKGDFN---SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--- 214
           +I   ITG  G      SR       V     K+ L V D      R L    D+ +   
Sbjct: 203 EIEPFITGPGGAIRPTPSRDGKQLAFVRRVRAKSVLYVTDVASGAERPLYDGLDRDMQET 262

Query: 215 -----FEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--- 264
                  P   ++P+ + + +  +    + R+ +   ++     R+   R++  A R   
Sbjct: 263 WAIHGVYPGMAWTPDNKAIVF--WAGGKLHRIDVATKKVTPIAFRVRGTRTIFEAVRSPQ 320

Query: 265 ----------------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISA 307
                            S  G R +          +Y   L +    RLT     +    
Sbjct: 321 AVAPERFSTKMLRWVQVSPKGDRVVYQA----LGKLYVKQLPAGTPRRLTKQDDHLEFYP 376

Query: 308 SYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           S+S D   IV+ + D E    + V+ + G + K ++Q +   Y +P  SP G  + +   
Sbjct: 377 SFSRDGRSIVYTTWDDEKLGTIRVVPTTGGEGKVLTQ-QPGYYVEPALSPDGKTLVYRAS 435

Query: 367 SGE---------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF--SRKKDGDTG 415
                          +  M   G   + L  D   + P +      + F     K+ +  
Sbjct: 436 GDGYLMPGLWSRNTGLFAMPAGGGAPKRLARDG--EQPHFGARSDRVYFLHVEHKEKEDV 493

Query: 416 SKLYSIDLNGRNETLINTPAYA------SDPQWVGF 445
             L SI L+G  E    T A A       D +WV F
Sbjct: 494 RSLKSIGLSGSEERTHLTSAEATELRVSPDERWVAF 529


>gi|325982655|ref|YP_004295057.1| WD40-like beta Propeller containing protein [Nitrosomonas sp.
           AL212]
 gi|325532174|gb|ADZ26895.1| WD40-like beta Propeller containing protein [Nitrosomonas sp.
           AL212]
          Length = 368

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 25/200 (12%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-- 326
           G++   S   DE  DIY  D        LTNTL  +  AS+SPD   I F S+R      
Sbjct: 134 GEQRSYSWDYDEFYDIYETDFSGKNIRNLTNTLGYDAEASWSPDGKLIAFASNRRAYSDE 193

Query: 327 -----------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--S 367
                             +Y+M ++GS+ KR++  +      P +SP G  I + +F  S
Sbjct: 194 LSAEEAALFKVNPASMIDIYIMNADGSNVKRLTHTQSY-DGGPFFSPDGKRIVWRRFSES 252

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           G +  I  M  DG+ ++ +   + +  AP + PSG+ +IF+    G    +LY +D++G+
Sbjct: 253 GREAEIFTMNIDGTDQKQITRLNVMSWAPFYHPSGKYIIFATNLHGHRNFELYIVDVDGQ 312

Query: 427 NE--TLINTPAYASDPQWVG 444
            E   + +   +   P +  
Sbjct: 313 KEPVRVTDMEGFDGLPVFTP 332



 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 89/216 (41%), Gaps = 27/216 (12%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA------- 281
            ++D ++   +Y  D    +  + + N         +S +GK    +  +          
Sbjct: 139 YSWDYDEFYDIYETD-FSGKNIRNLTNTLGYDAEASWSPDGKLIAFASNRRAYSDELSAE 197

Query: 282 ------------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQ 327
                       +DIY ++   +  +RLT+T   +    +SPD  +IV+   S+   + +
Sbjct: 198 EAALFKVNPASMIDIYIMNADGSNVKRLTHTQSYDGGPFFSPDGKRIVWRRFSESGREAE 257

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQE-- 383
           ++ M  +G+DQK+I++    S+  P + P G  I F         F + ++  DG +E  
Sbjct: 258 IFTMNIDGTDQKQITRLNVMSW-APFYHPSGKYIIFATNLHGHRNFELYIVDVDGQKEPV 316

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           R+   +     P ++P G  + ++  +  +    L+
Sbjct: 317 RVTDMEGFDGLPVFTPDGNHITWTSDRTPEKKGLLF 352



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 97/237 (40%), Gaps = 33/237 (13%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIK---------NSLCVMDRDGANIRYLTPSRDQ 212
           +  S T E  +  ++++   E   SG  +           +   D  G NIR LT +   
Sbjct: 109 VLFSSTHEDAEAKAKMVAEIERRKSGEQRSYSWDYDEFYDIYETDFSGKNIRNLTNTL-G 167

Query: 213 ILFEPRFSPNQQKVAYATYD------------------DEDILRVYLMDTRIDRAPKRIG 254
              E  +SP+ + +A+A+                       ++ +Y+M+       KR+ 
Sbjct: 168 YDAEASWSPDGKLIAFASNRRAYSDELSAEEAALFKVNPASMIDIYIMNAD-GSNVKRLT 226

Query: 255 NFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + +S    P FS +GKR +     +     +I+++++     +++T    ++ +  Y P 
Sbjct: 227 HTQSYDGGPFFSPDGKRIVWRRFSESGREAEIFTMNIDGTDQKQITRLNVMSWAPFYHPS 286

Query: 313 SSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
              I+F ++  G    +LY++  +G  +     D E     PV++P G+ I +T   
Sbjct: 287 GKYIIFATNLHGHRNFELYIVDVDGQKEPVRVTDMEGFDGLPVFTPDGNHITWTSDR 343



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 20/60 (33%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S    +  + + G     L ++D DG          +     P F+P+   + + +    
Sbjct: 286 SGKYIIFATNLHGHRNFELYIVDVDGQKEPVRVTDMEGFDGLPVFTPDGNHITWTSDRTP 345


>gi|77360114|ref|YP_339689.1| hypothetical protein PSHAa1171 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76875025|emb|CAI86246.1| conserved protein of unknown function [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 1060

 Score =  145 bits (366), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 84/210 (40%), Gaps = 25/210 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I   +   +    S +GK  +  +  D    IY++ +      +LT+ +   +   +SP+
Sbjct: 44  ISVDQGTWMNLDISPDGKTLVFDLLGD----IYTMPISGGNATQLTSDIAWQMQPRFSPN 99

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFS 367
              I F SD+ G + +++M  NG +Q  ++ +       P WSP GD +          S
Sbjct: 100 GKHIAFTSDQGGGDNIWIMDLNGENQSAVTDETFRLLNSPAWSPDGDYLVARKHFTASRS 159

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTG 415
                + +  K G +   L + ++ Q     P +SP GR + FS             D+ 
Sbjct: 160 LGAGEVWLYHKAGGKGVQLTKRADDQKDLGEPMFSPDGRYVYFSHDATPGKTFHYSKDSV 219

Query: 416 SKLYSIDL----NGRNETLINTPAYASDPQ 441
           + +Y I       G  ET+I+    A  P 
Sbjct: 220 AGIYKIKRYDRETGEIETVISGMGGAIRPT 249



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 95/235 (40%), Gaps = 30/235 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+ + + +    D     +Y M         ++ +  +  + PRFS NGK    +  +
Sbjct: 56  ISPDGKTLVFDLLGD-----IYTMPI-SGGNATQLTSDIAWQMQPRFSPNGKHIAFTSDQ 109

Query: 279 DEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVMQ 332
               +I+ +DL       +T+  F +  S ++SPD   +V    F + R  G  ++++  
Sbjct: 110 GGGDNIWIMDLNGENQSAVTDETFRLLNSPAWSPDGDYLVARKHFTASRSLGAGEVWLYH 169

Query: 333 SNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVMK 377
             G    ++++  D +    +P++SP G  + F+  +                + I    
Sbjct: 170 KAGGKGVQLTKRADDQKDLGEPMFSPDGRYVYFSHDATPGKTFHYSKDSVAGIYKIKRYD 229

Query: 378 KDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           ++  + E ++        PT SP G+ L + ++ D  T   LY  DL     T +
Sbjct: 230 RETGEIETVISGMGGAIRPTPSPDGKKLAYIKRDDFQT--SLYLYDLTSGEHTKL 282



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 118/333 (35%), Gaps = 50/333 (15%)

Query: 158 ISDDIYQSITGE--KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ--I 213
           ++D+ ++ +       D +  +     +    +    + +  + G     LT   D    
Sbjct: 128 VTDETFRLLNSPAWSPDGDYLVARKHFTASRSLGAGEVWLYHKAGGKGVQLTKRADDQKD 187

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDT-----------RIDRAPKRIGNFRSMILA 262
           L EP FSP+ + V ++          Y  D+           R     + + +     + 
Sbjct: 188 LGEPMFSPDGRYVYFSHDATPGKTFHYSKDSVAGIYKIKRYDRETGEIETVISGMGGAIR 247

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---------AS--YSP 311
           P  S +GK+     + D    +Y  DL S    +L + L  ++           +  ++P
Sbjct: 248 PTPSPDGKKLAYIKRDDFQTSLYLYDLTSGEHTKLYDKLERDMQETWAIHGVYPTIAWTP 307

Query: 312 DSSQIVF----------ESDREGKEQLYVMQSNGSDQK--RISQDKEASYF------DPV 353
           D+ Q+VF           SD+  +   + +Q+    QK  R +Q+ +   F      +  
Sbjct: 308 DNQQLVFWAGGTIHKLDVSDKSVETIAFKVQTTKKIQKAVRFTQNLDTDEFDVKMLRNVQ 367

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKD 411
            SP G+   F         I     +  + + L + ++       +S  G+ ++++   D
Sbjct: 368 ISPDGETAIFEALG----HIYKRDLESGKIKRLTKQTDHYELFAQYSRDGKKIVYTTWDD 423

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            + G        +GR +T+   P    +P +  
Sbjct: 424 NEQGQVRVVSASSGRGDTITEQPGKYVEPTFSP 456



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 70/201 (34%), Gaps = 20/201 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+ +   +          +Y  D    +  +         L  ++S +GK+ + +   
Sbjct: 368 ISPDGETAIFEALGH-----IYKRDLESGKIKRLTKQTDHYELFAQYSRDGKKIVYTTWD 422

Query: 279 D-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---------KEQL 328
           D E   +  V   S   + +T      +  ++SPD   +V+     G            +
Sbjct: 423 DNEQGQVRVVSASSGRGDTITEQPGKYVEPTFSPDGKTVVYRKATGGSILNPKWSLNPGV 482

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y + + G   + IS++     F        D +       +   + V++ D  + R L E
Sbjct: 483 YSVSTKGGKSELISKNGYQPQFGAA----NDRVYIMSPWPKP-TLSVVELDTKKVRKLYE 537

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
             +      SP G+ L F+ +
Sbjct: 538 SEHATEFRVSPDGQYLAFAER 558



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSL 404
           + ++ +   SP G  + F         I  M   G     L  D   Q  P +SP+G+ +
Sbjct: 48  QGTWMNLDISPDGKTLVFDLLGD----IYTMPISGGNATQLTSDIAWQMQPRFSPNGKHI 103

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
            F+  + G  G  ++ +DLNG N++ +    +   + P W  
Sbjct: 104 AFTSDQGG--GDNIWIMDLNGENQSAVTDETFRLLNSPAWSP 143



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 96/294 (32%), Gaps = 48/294 (16%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR- 238
           +  +      +  + V+         +T    + + EP FSP+ + V Y       IL  
Sbjct: 416 IVYTTWDDNEQGQVRVVSASSGRGDTITEQPGKYV-EPTFSPDGKTVVYRKATGGSILNP 474

Query: 239 -------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                  VY + T+  ++     N                 +  +       +  V+L +
Sbjct: 475 KWSLNPGVYSVSTKGGKSELISKNGYQPQFGAA-----NDRVYIMSPWPKPTLSVVELDT 529

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDR---------EGKEQLYVMQSNGSDQKRIS 342
               +L  +         SPD   + F  +R         E  + L +  ++  +Q  I 
Sbjct: 530 KKVRKLYESEHA-TEFRVSPDGQYLAFA-ERFKVFVTPFVENGKTLNISPTD--NQFPIE 585

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQAPT 396
           Q    +  +  WS   + + +T    E +         + K D    ++   D+     +
Sbjct: 586 QLSVRAGENISWSANSNKLYWT-LGPELYHASLEGMFAINKADDKDFKVKSGDNI----S 640

Query: 397 WS-----PSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +S     P G  +  +  K    DG+   +   I  +G++   I T A  S P+
Sbjct: 641 FSKKMAEPKG-MIALTGAKIITMDGEKVIENGVIITDGKHIKAIGTAAEVSIPK 693



 Score = 37.3 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 7/64 (10%)

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDP 440
              + V+         SP G++L+F      D    +Y++ ++G N T + +  A+   P
Sbjct: 41  DATISVDQGTWMNLDISPDGKTLVF------DLLGDIYTMPISGGNATQLTSDIAWQMQP 94

Query: 441 QWVG 444
           ++  
Sbjct: 95  RFSP 98


>gi|91773135|ref|YP_565827.1| WD40-like beta propeller protein [Methanococcoides burtonii DSM
           6242]
 gi|91712150|gb|ABE52077.1| TolB-like beta propeller protein [Methanococcoides burtonii DSM
           6242]
          Length = 416

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 62/304 (20%), Positives = 117/304 (38%), Gaps = 50/304 (16%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRD--QILFEPRFSPNQQKVAYATYDDEDILRV 239
           E++ SG       +MD DG+N   L        + +    SP+  K+ + +    +   +
Sbjct: 54  ENITSGDWVVDFWMMDADGSNKIQLASGDSMLGLGYNSPLSPDGTKLLFVSNATGN-HEL 112

Query: 240 YLMDTRIDRAPKRIGNFRSMI--------LAPRFSSNGKRALISVQKDEA---------- 281
           ++MD       +                     +S    + +      E           
Sbjct: 113 WIMDIDGSDKRQLTYGAHLENNLLGLAGRWGISWSPGSSQIVYVSASSENRNVWETVEIN 172

Query: 282 ---------------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                           DI+ VD   +   +LT +   NI A++  D  +I F S+  G  
Sbjct: 173 GKKEQMFNISKVSKDYDIWIVDHDGSNNLKLTTSRKDNIGATWRSDGEKIAFVSNESGNG 232

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQER 384
            +++M  +GSD+ ++    + S ++  WSP G  I + K   E +  +I VM  DGS ++
Sbjct: 233 GIWIMNKDGSDKIQLV---DGSAYNIDWSPDGTKIVYVKGDHENYTSSIWVMDTDGSNKK 289

Query: 385 LLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            L  +S        P WSP G  ++F+    G+   +++ ++ +G ++  I+       P
Sbjct: 290 PLTNNSKYFVSQSYPDWSPDGSKIVFNSGNIGE--YEIWIMNSDGTDQIRID---EGLMP 344

Query: 441 QWVG 444
           QW  
Sbjct: 345 QWSP 348



 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 15/204 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             ++        + ++D DG+N   LT SR   +    +  + +K+A+ + +  +   ++
Sbjct: 178 MFNISKVSKDYDIWIVDHDGSNNLKLTTSRKDNIGA-TWRSDGEKIAFVSNESGNG-GIW 235

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM--DIYSVDLQSNATERLT 298
           +M+       + +           +S +G + +      E     I+ +D   +  + LT
Sbjct: 236 IMNKDGSDKIQLV---DGSAYNIDWSPDGTKIVYVKGDHENYTSSIWVMDTDGSNKKPLT 292

Query: 299 NTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           N     +S     +SPD S+IVF S   G+ ++++M S+G+DQ RI +        P WS
Sbjct: 293 NNSKYFVSQSYPDWSPDGSKIVFNSGNIGEYEIWIMNSDGTDQIRIDEG-----LMPQWS 347

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD 379
           P+GD I     +G+K AI V+  D
Sbjct: 348 PKGDKIVTMAINGDKMAISVINLD 371


>gi|297156269|gb|ADI05981.1| amidohydrolase [Streptomyces bingchenggensis BCW-1]
          Length = 1088

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 92/203 (45%), Gaps = 11/203 (5%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D A +RI   ++   +   S +G+  ++    D    +++V        RLT        
Sbjct: 61  DGATRRITVTQATNASAALSPDGRTVVL----DLLNLLWTVPAAGGEATRLTGIDQEATE 116

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPD   +V++S  +G   L++ +++G+  +R++    A + +P +SP G  IA+   
Sbjct: 117 PDFSPDGRHLVYQSYTDGNFHLWLARADGTGARRLTSGG-ADHREPRFSPDGKRIAYAGE 175

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +  ++AI V+  D    ++    ++       P W P G+++ F+  K GD    +  +D
Sbjct: 176 ADGRYAIHVLDLDSGATKVWAPSTDATVQQAQPFWRPDGKAIAFTSGK-GDAPQSVVQVD 234

Query: 423 LNGRNETL-INTPAYASDPQWVG 444
            +G+  TL   T    + P +  
Sbjct: 235 ADGKRTTLATVTEGRVAGPSFSP 257



 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 75/217 (34%), Gaps = 12/217 (5%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
                DGA  R               SP+ + V        D+L +            R+
Sbjct: 56  ATQTADGATRRITVTQATNASA--ALSPDGRTVVL------DLLNLLWTVPAAGGEATRL 107

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                    P FS +G+  +     D    ++          RLT+    +    +SPD 
Sbjct: 108 TGIDQEATEPDFSPDGRHLVYQSYTDGNFHLWLARADGTGARRLTSGGADHREPRFSPDG 167

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKF 371
            +I +  + +G+  ++V+  +    K  +   +A+     P W P G  IAFT   G+  
Sbjct: 168 KRIAYAGEADGRYAIHVLDLDSGATKVWAPSTDATVQQAQPFWRPDGKAIAFTSGKGDAP 227

Query: 372 AIGVM-KKDGSQERLLV-EDSNLQAPTWSPSGRSLIF 406
              V    DG +  L    +  +  P++SP G    +
Sbjct: 228 QSVVQVDADGKRTTLATVTEGRVAGPSFSPDGARFAY 264



 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 50/210 (23%), Positives = 79/210 (37%), Gaps = 6/210 (2%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +D   + IT  +    S  L      V   + N L  +   G     LT   DQ   EP 
Sbjct: 60  ADGATRRITVTQATNASAALSPDGRTVVLDLLNLLWTVPAAGGEATRLT-GIDQEATEPD 118

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + + Y +Y D +      +        +R+ +  +    PRFS +GKR   + + 
Sbjct: 119 FSPDGRHLVYQSYTDGNFH--LWLARADGTGARRLTSGGADHREPRFSPDGKRIAYAGEA 176

Query: 279 DEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           D    I+ +DL S AT+     T+         + PD   I F S +    Q  V     
Sbjct: 177 DGRYAIHVLDLDSGATKVWAPSTDATVQQAQPFWRPDGKAIAFTSGKGDAPQSVVQVDAD 236

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             +  ++   E     P +SP G   A+  
Sbjct: 237 GKRTTLATVTEGRVAGPSFSPDGARFAYVH 266



 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 87/247 (35%), Gaps = 25/247 (10%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  P  SP+ +++A+A   D  +  V     +   APK + +   +   P +S +G   +
Sbjct: 363 IVSPSLSPDGERIAFAALGDIWLAPVNPPRGK-GSAPKAVVSDGHLNTDPAWSPDGSALV 421

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
               +  A D+++ D+    T RLT+        ++SPD + + F     G   L+ +  
Sbjct: 422 YVSDRGGAADLWTYDIADGTTRRLTDLQDAASGPAFSPDGASVAFG---LGAGTLHTVDV 478

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLI-------AFTKFSGEKFAIGVMKKDGSQER-- 384
                ++++    A    P +S  G  +          ++      +  ++    +    
Sbjct: 479 ATGAVRKVAGPLNAP-GRPTFSADGRKLSLAALAPVTARYREGFNRVLTVELATGEAHYD 537

Query: 385 -----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYAS 438
                  + +     P  SP G+   +           L ++D  GR   T        +
Sbjct: 538 DPVPGKSLANRIDAGPVHSPDGKHTAYIV----GGTLHLSALDTAGRPTGTARELNGETA 593

Query: 439 D-PQWVG 444
           D P W  
Sbjct: 594 DAPSWSA 600



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 79/216 (36%), Gaps = 23/216 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           S   +  +P +SP+   + Y + D      ++  D   D   +R+ + +     P FS +
Sbjct: 403 SDGHLNTDPAWSPDGSALVYVS-DRGGAADLWTYDI-ADGTTRRLTDLQDAASGPAFSPD 460

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ-------IVFESD 321
           G      +    A  +++VD+ + A  ++   L      ++S D  +        V    
Sbjct: 461 GASVAFGL---GAGTLHTVDVATGAVRKVAGPLNAPGRPTFSADGRKLSLAALAPVTARY 517

Query: 322 REGKEQLYVMQSNGSDQK---RISQDKEAS--YFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           REG  ++  ++    +      +     A+     PV SP G   A+    G    +  +
Sbjct: 518 REGFNRVLTVELATGEAHYDDPVPGKSLANRIDAGPVHSPDGKHTAYI--VGGTLHLSAL 575

Query: 377 KKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              G      R L       AP+WS   RSL++   
Sbjct: 576 DTAGRPTGTAREL-NGETADAPSWSADSRSLLYLSN 610


>gi|325293040|ref|YP_004278904.1| tolB protein [Agrobacterium sp. H13-3]
 gi|325060893|gb|ADY64584.1| tolB protein [Agrobacterium sp. H13-3]
          Length = 276

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 15/203 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+    A +   +     +YL+ +          N  S      +S +GK       +
Sbjct: 73  ISPDGSLYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHG--WSPDGKGFAYCGIR 130

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D+  DIYS+D+ S    RLT+    N    YSPD   I F S R G+ Q++ ++ +GS  
Sbjct: 131 DQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGEWIYFNSSRTGQMQIWRVRVDGSAV 190

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVE-- 388
           +RI+      +F P  SP GD + F  +  + F         + +M  DG     L +  
Sbjct: 191 ERITDSAYGDWF-PHPSPSGDKVVFVSYDADVFDHPRDLNVRVRLMDMDGGNAETLFDLF 249

Query: 389 --DSNLQAPTWSPSGRSLIFSRK 409
                + +P WSP G    + R 
Sbjct: 250 GGQGTMNSPNWSPDGDEFAYVRY 272



 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 82/188 (43%), Gaps = 14/188 (7%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K+++ ++   G   R +T  ++   +   +SP+ +  AY    D  +  +Y MD     
Sbjct: 89  GKSAIYLLPSTGGTPRLMT--KNLPSYWHGWSPDGKGFAYCGIRD-QVFDIYSMDIDSGV 145

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              R+ +       P +S +G+    +  +   M I+ V +  +A ER+T++ + +    
Sbjct: 146 ET-RLTHGEGRNDGPDYSPDGEWIYFNSSRTGQMQIWRVRVDGSAVERITDSAYGDWFPH 204

Query: 309 YSPDSSQIVFESD--------REGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQG 358
            SP   ++VF S         R+   ++ +M  +G + + +      + +   P WSP G
Sbjct: 205 PSPSGDKVVFVSYDADVFDHPRDLNVRVRLMDMDGGNAETLFDLFGGQGTMNSPNWSPDG 264

Query: 359 DLIAFTKF 366
           D  A+ ++
Sbjct: 265 DEFAYVRY 272



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 80/204 (39%), Gaps = 12/204 (5%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + + R  +  + +     +  AP +S +GK  L  +  D  +   S+    +  +  
Sbjct: 4   SIEIFNIRTRQM-RVVWQTPQLFEAPNWSPDGKYLL--LNCDGLLYRLSLAGDPSPEKVD 60

Query: 298 TNTLFI-NISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           T    I N     SPD S     SD    GK  +Y++ S G   + ++++  + +    W
Sbjct: 61  TGFATICNNDHGISPDGSLYA-ISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHG--W 117

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGD 413
           SP G   A+     + F I  M  D   E  L         P +SP G  + F+  + G 
Sbjct: 118 SPDGKGFAYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGEWIYFNSSRTGQ 177

Query: 414 TGSKLYSIDLNGRNETLINTPAYA 437
              +++ + ++G     I   AY 
Sbjct: 178 M--QIWRVRVDGSAVERITDSAYG 199



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 28/81 (34%), Gaps = 6/81 (7%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV----MDRDGANIRYLTP--SR 210
            I+D  Y            +++FVS           L V    MD DG N   L      
Sbjct: 192 RITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLNVRVRLMDMDGGNAETLFDLFGG 251

Query: 211 DQILFEPRFSPNQQKVAYATY 231
              +  P +SP+  + AY  Y
Sbjct: 252 QGTMNSPNWSPDGDEFAYVRY 272


>gi|308062403|gb|ADO04291.1| translocation protein TolB [Helicobacter pylori Cuz20]
          Length = 417

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 58/369 (15%), Positives = 137/369 (37%), Gaps = 24/369 (6%)

Query: 64  KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           K+ EV++ DL+ S  F++                  + +       ++    V  E  ++
Sbjct: 48  KLHEVLANDLKTSQHFDV--------SQNKEQGAINYAELKDKKVHLVALVSVAVENGNK 99

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           +    +L+DV          +    +      AH ++  +   +      +  R++  S+
Sbjct: 100 IS-RLKLYDVDTETLKKTFDYPILSSDLYPFAAHNMAIVVNDYLKAPSIAWMKRLIVFSK 158

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +  GI   +L          +      +++   P+++  +Q   Y T   E    +   
Sbjct: 159 YIGPGITNIALADYTM---RYQKEIIKNNRLNIFPKWANAEQTEFYYTQYGERTPMILKY 215

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +     + I + + M +    SS+G + L+S+  D   D+Y  D       ++T    
Sbjct: 216 NIQKATH-ENIASSQGMAVVSSVSSDGSKILMSLAPDGQPDVYLYDTHKKTKTKITRYPG 274

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLI 361
           I++S  +  D   + F SDR G   +Y+ +       +++  +  ++     +    D +
Sbjct: 275 IDVSGVFLEDDKSMAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY---KDSV 331

Query: 362 AFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +             F + ++  +    R L  + + Q P +S  GR++++ +K   +  
Sbjct: 332 VYVSRENLNEFGKTVFNLNLITLNSKYIRRLTVNGSNQMPRFSMDGRNIMYIKKTPQEYA 391

Query: 416 SKLYSIDLN 424
             L  +D N
Sbjct: 392 MGLILLDYN 400


>gi|149922524|ref|ZP_01910955.1| tol-pal system beta propeller repeat protein TolB [Plesiocystis
           pacifica SIR-1]
 gi|149816632|gb|EDM76126.1| tol-pal system beta propeller repeat protein TolB [Plesiocystis
           pacifica SIR-1]
          Length = 418

 Score =  145 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/311 (20%), Positives = 120/311 (38%), Gaps = 36/311 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLC--VMDRDGANIRYLTPS-RDQILFEPRF 219
           + ++    G+    ++  S+   +G   + L    +  +GA    LT      ++  P  
Sbjct: 105 FPALLEPSGEGL--MILRSQPAGTGKTHDELLRLALGAEGATPVSLTAGFGPAMIRNPSR 162

Query: 220 SPNQQKVAYAT--YDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISV 276
            P  + + + +      D+ R+ L     D     R+         P  S +G+R     
Sbjct: 163 DPAGRFLVFESDANSFRDLYRLELSSNGGDAPSVLRLTGDEQGNFEPALSPDGERVAFVS 222

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSN 334
            +D   ++Y++     A  RLT +   + +  +S D   + F S R  +    ++V+ + 
Sbjct: 223 SRDGDAELYTMTADGGAPTRLTTSPGDDSAPRWSADGQTLAFVSARDLDRGMDVFVIPAA 282

Query: 335 GSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFSGEKFAIGVM--------------KK 378
           G + K +   ++A     D   SP G  +AFT+ S    A  V+              + 
Sbjct: 283 GGEAKALLPARDAPVLVRDLSVSPDGTKLAFTELSQGAGAAVVVVSFPEGAVLARSRERG 342

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYA 437
           +G+    L++    + P WSP G+ L F+R   G   S +  +D +GR    L   P+  
Sbjct: 343 EGAGATPLID----EQPVWSPDGKHLAFTRG-SGPDRSDILRMDADGRERVNLTMGPSDN 397

Query: 438 SD----PQWVG 444
                 P+W  
Sbjct: 398 RGVHWLPRWSP 408


>gi|190892048|ref|YP_001978590.1| periplasmic component of the Tol biopolymer transport system
           protein [Rhizobium etli CIAT 652]
 gi|218514537|ref|ZP_03511377.1| putative periplasmic component of the Tol biopolymer transport
           system protein [Rhizobium etli 8C-3]
 gi|190697327|gb|ACE91412.1| putative periplasmic component of the Tol biopolymer transport
           system protein [Rhizobium etli CIAT 652]
          Length = 276

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 86/230 (37%), Gaps = 16/230 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L  +  DG  +  +              SP+  ++  +   +     +Y++         
Sbjct: 45  LFRLPLDGGEVIQVDTGFAVNCNNDHGISPDGTEIVISDKSEFGKSSIYILPIEGGTPRL 104

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
              N  S      +S +G++      +D+  DIY++ +      RLT+    N    YS 
Sbjct: 105 VTENQPSYWHG--WSPDGRQLAYCGIRDDLFDIYTISVDGGVETRLTHGEGRNDGPDYSA 162

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I F S R G  Q++ +  +G+  ++++ D + ++F    SP+ D +    +    F
Sbjct: 163 DGQWIYFNSSRTGLMQIWRIHPDGTGLEQVTSDNQGNWFA-HPSPKNDKVLILSYDPSVF 221

Query: 372 --------AIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRK 409
                    + +M  DG   + L E       +  P WSP G    + R 
Sbjct: 222 DHPRDLDVRLRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGDEFAYVRY 271



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 86/201 (42%), Gaps = 15/201 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V + + +  RA + +     ++ AP F+ +G   L+    +    ++ + L      ++
Sbjct: 4   SVEIYNVKTGRA-REVWQTDRLVEAPNFAPDGSYLLL----NGDGLLFRLPLDGGEVIQV 58

Query: 298 TNTLFINIS--ASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                +N +     SPD ++IV  SD+   GK  +Y++   G   + +++++ + +    
Sbjct: 59  DTGFAVNCNNDHGISPDGTEIV-ISDKSEFGKSSIYILPIEGGTPRLVTENQPSYWHG-- 115

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG 412
           WSP G  +A+     + F I  +  DG  E  L         P +S  G+ + F+  + G
Sbjct: 116 WSPDGRQLAYCGIRDDLFDIYTISVDGGVETRLTHGEGRNDGPDYSADGQWIYFNSSRTG 175

Query: 413 DTGSKLYSIDLNGRNETLINT 433
               +++ I  +G     + +
Sbjct: 176 LM--QIWRIHPDGTGLEQVTS 194



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 15/169 (8%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             ++++     +  T  +  + +++PD S ++      G   L+ +  +G +  ++    
Sbjct: 7   IYNVKTGRAREVWQTDRLVEAPNFAPDGSYLLLN----GDGLLFRLPLDGGEVIQVDTGF 62

Query: 346 EASYFDPV-WSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             +  +    SP G  I  +  S   K +I ++  +G   RL+ E+       WSP GR 
Sbjct: 63  AVNCNNDHGISPDGTEIVISDKSEFGKSSIYILPIEGGTPRLVTENQPSYWHGWSPDGRQ 122

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           L +   +D      +Y+I ++G  ET +         P Y++D QW+ F
Sbjct: 123 LAYCGIRDD--LFDIYTISVDGGVETRLTHGEGRNDGPDYSADGQWIYF 169


>gi|18395017|ref|NP_564146.1| unknown protein [Arabidopsis thaliana]
 gi|5263318|gb|AAD41420.1|AC007727_9 F8K7.9 [Arabidopsis thaliana]
 gi|14334812|gb|AAK59584.1| unknown protein [Arabidopsis thaliana]
 gi|24030458|gb|AAN41381.1| unknown protein [Arabidopsis thaliana]
 gi|332192016|gb|AEE30137.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 703

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 70/396 (17%), Positives = 136/396 (34%), Gaps = 57/396 (14%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
            ++  S   +   P  +  F    S      +     + G +   VE  L+D+  + + +
Sbjct: 284 PVTTKSVTIQRVTPPGLHAFTPATSPNNNNFIAVATRRPGSEIRHVE--LFDL-KKNEFV 340

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
                 SP S         D         +GD   R    +         N L +   DG
Sbjct: 341 ELTRLVSPKSHHFNPFLSPDSSRVGYHSCRGDATGRKTPRNLLQSLKTTSNDLSLFRFDG 400

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A               P  SP   + A+ ++       V++++       + +     M 
Sbjct: 401 A--------------FPSISPEGDRFAFVSFTG-----VFVVNPDGSGLRQLL---PQMG 438

Query: 261 LAPRFSSNGKRALISVQKD------EAMDIYSVDLQS----NATERLTNTLFINISASYS 310
               +       + +            +DI ++++ +     A ++LT T   N     S
Sbjct: 439 FGTVWDPIRHGIVYTSSGPALAPGKSQIDILAINVDAPSPATAVKKLTTTGENNAFPWPS 498

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSG 368
           PD  +IVF S R G + LY+M +   +   + +    ++ D +  WSP G+ I F     
Sbjct: 499 PDGKRIVFRSARSGTKNLYIMDAEKGESGGLFRLTNGNWNDTIATWSPDGNWIVFASNRE 558

Query: 369 EK----FAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTG------ 415
                   I V+  DG+  R L ++        P +SP  + ++F+    G +       
Sbjct: 559 FPGTLLMNIYVVHPDGTGLRKLAQNLTGLVSMHPMFSPDSKRIVFTTIYAGISAEQIGNP 618

Query: 416 ------SKLYSIDLNGRNETLINTPA-YASDPQWVG 444
                 S++++++L+G   T +   +     P W  
Sbjct: 619 HFNVPSSEIFTVNLDGSGLTRLTHNSVEDGPPMWFP 654



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 83/279 (29%), Gaps = 39/279 (13%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF---------EPRFSPNQQKV 226
            +++V+E   +  +   +   D  G+ I+    S ++             P  +      
Sbjct: 101 HLIYVTERAGTPSLNYDVVHSDNVGSRIQVPLFSGEEQQSGMNVNSMKDTPVLTNGYLVH 160

Query: 227 AYATYDDEDILRVYLMDTRI---DRAPKRIGNFRSMILAPRFSSNGKRALISV--QKDEA 281
                +    +  +          ++ +R+        +P  S +GK   ++   +K   
Sbjct: 161 VSTHENPGKPMASWAAVYSTELRTKSTRRLTPLGIADFSPAVSPSGKWTAVASFGEKGWT 220

Query: 282 MDIYSVDLQSNATERLTNTLFINIS-------ASYSPDSSQIVFE--SDREGKEQLYVMQ 332
             +   ++ S+    LT      +          +  D S + F   SD         + 
Sbjct: 221 WSMVEKEISSDVYVFLTQDGTQRVKVVEQGGWPRWV-DDSTLYFHRKSDDGWISVYRAIL 279

Query: 333 SNGSDQ-------KRISQDKEASYFDPVWSP-QGDLIAFTKFSGEK--FAIGVMKKDGSQ 382
                        +R++     + F P  SP   + IA            + +     ++
Sbjct: 280 PKTGPVTTKSVTIQRVTPPGLHA-FTPATSPNNNNFIAVATRRPGSEIRHVELFDLKKNE 338

Query: 383 ----ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                RL+   S+   P  SP    + +   +   TG K
Sbjct: 339 FVELTRLVSPKSHHFNPFLSPDSSRVGYHSCRGDATGRK 377


>gi|294146610|ref|YP_003559276.1| putative amidohydrolase [Sphingobium japonicum UT26S]
 gi|292677027|dbj|BAI98544.1| putative amidohydrolase [Sphingobium japonicum UT26S]
          Length = 992

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 82/191 (42%), Gaps = 9/191 (4%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                +A   S +GK   + +Q      ++ +  +    +R+T+         +SPD S+
Sbjct: 47  HEGTSMAVSVSPDGKWLAVDLQGS----LWIIPAKGGKAKRITDYFNDARQPVWSPDGSR 102

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + + + R+G   L+ ++ +GSD ++++Q       +P WSP G  IAF+      + I  
Sbjct: 103 LAYFAYRDGGYDLWTIKPDGSDMRKLTQ-GAWDDREPAWSPDGRTIAFSSDRSGNYDIWT 161

Query: 376 MKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT 433
           +       + +  +    + P+WSP G S+ ++    G T   LY+  + +G+   L   
Sbjct: 162 LDVASGAVKQVSSNPREDRMPSWSPDGASIAYAGIDGGKTA--LYATTVADGKESLLKQV 219

Query: 434 PAYASDPQWVG 444
                 P +  
Sbjct: 220 AGRVDAPSYGP 230



 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 83/215 (38%), Gaps = 8/215 (3%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G          +        SP+ + +A       D+     +        KRI ++ + 
Sbjct: 37  GGEKPIAFDVHEGTSMAVSVSPDGKWLAV------DLQGSLWIIPAKGGKAKRITDYFND 90

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              P +S +G R      +D   D++++    +   +LT   + +   ++SPD   I F 
Sbjct: 91  ARQPVWSPDGSRLAYFAYRDGGYDLWTIKPDGSDMRKLTQGAWDDREPAWSPDGRTIAFS 150

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SDR G   ++ +       K++S +       P WSP G  IA+    G K A+      
Sbjct: 151 SDRSGNYDIWTLDVASGAVKQVSSNPREDRM-PSWSPDGASIAYAGIDGGKTALYATTVA 209

Query: 380 GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD 413
             +E LL +    + AP++ P+G+     +   G 
Sbjct: 210 DGKESLLKQVAGRVDAPSYGPTGQLAYVVQDAKGS 244



 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 73/202 (36%), Gaps = 22/202 (10%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           I+ P  S +G R       D    +Y +  +  A E LT    ++   ++SPD   I + 
Sbjct: 321 IVHPTISPDGSRIAFVALGD----LYLMSSKGGAPENLTRDAALDADPAWSPDGQSIAYT 376

Query: 320 SDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVM 376
           SD+ G   QL++        ++++           WSP G  IAF    G      + V+
Sbjct: 377 SDKGGGLPQLWMRDLKTGKDRKLTSIDTQPLGA-AWSPDGSRIAFLDVDGRWGVAGVCVV 435

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFS-----RKKDGDTGSKLYSIDLNGRNETL 430
                +   L        +PTWSP G+ +  +          +  +++Y I  +G+ E  
Sbjct: 436 DVATGKITRLQASLGQPGSPTWSPDGKYVAIALSYKYSNSFREGTNQIYVIPADGKGEPF 495

Query: 431 INTP--------AYASDPQWVG 444
              P             P W  
Sbjct: 496 WQIPQANAGTDTRGGGGPAWSP 517



 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 66/358 (18%), Positives = 116/358 (32%), Gaps = 81/358 (22%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           A  I+D    +         SR+ + +           L  +  DG+++R LT       
Sbjct: 81  AKRITDYFNDARQPVWSPDGSRLAYFAYRDGG----YDLWTIKPDGSDMRKLTQG-AWDD 135

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            EP +SP+ + +A+++ D      ++ +D     A K++ +       P +S +G     
Sbjct: 136 REPAWSPDGRTIAFSS-DRSGNYDIWTLDVASG-AVKQVSSNPREDRMPSWSPDGASIAY 193

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +        +Y+  +       L        + SY P         D +G      ++ +
Sbjct: 194 AGIDGGKTALYATTVADGKESLLKQVAGRVDAPSYGPTGQLAYVVQDAKGSH----LEVD 249

Query: 335 GSDQK--------RISQDKEASYF------------------------------------ 350
           G            RIS  K   Y+                                    
Sbjct: 250 GKSVSAAENVFPFRISWGKGGYYYVSDGKIRYRSGARLSTIDFAATLEAVKPSYARAKRD 309

Query: 351 -------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PT 396
                         P  SP G  IAF         + +M   G     L  D+ L A P 
Sbjct: 310 WDSTAPRKALGIVHPTISPDGSRIAFVALGD----LYLMSSKGGAPENLTRDAALDADPA 365

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN------TPAYASDPQWVGFMD 447
           WSP G+S+ ++  K G    +L+  DL  G++  L +        A++ D   + F+D
Sbjct: 366 WSPDGQSIAYTSDKGGGL-PQLWMRDLKTGKDRKLTSIDTQPLGAAWSPDGSRIAFLD 422



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 53/354 (14%), Positives = 115/354 (32%), Gaps = 47/354 (13%)

Query: 75  RSD-VFNLISQDSFKQKITNPDSIPRFQDWNS---LGAQVLVTGRVIKEGKDRLRVEFRL 130
           RS    + I   +  + +  P      +DW+S     A  +V   +  +G    R+ F  
Sbjct: 282 RSGARLSTIDFAATLEAV-KPSYARAKRDWDSTAPRKALGIVHPTISPDGS---RIAF-- 335

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
             V      +      +P +  + A   +D            ++     ++ +   G   
Sbjct: 336 --VALGDLYLMSSKGGAPENLTRDAALDAD----------PAWSPDGQSIAYTSDKGGGL 383

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L + D      R LT S D       +SP+  ++A+   D    +    +        
Sbjct: 384 PQLWMRDLKTGKDRKLT-SIDTQPLGAAWSPDGSRIAFLDVDGRWGVAGVCVVDVATGKI 442

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQ-------KDEAMDIYSVDLQSNATERL------ 297
            R+        +P +S +GK   I++        ++    IY +                
Sbjct: 443 TRLQASLGQPGSPTWSPDGKYVAIALSYKYSNSFREGTNQIYVIPADGKGEPFWQIPQAN 502

Query: 298 --TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             T+T       ++SPD +++      EG  +++ ++++G              + P W+
Sbjct: 503 AGTDTRG-GGGPAWSPDGTKMAAIY--EGLLKIWPVEADGKPMGPPRSYTSEIAYFPTWT 559

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                I +         +  +  +    R +  D + +     P+GR++I    
Sbjct: 560 ADSRTILYQSSD----RLKTIDTETGVIREIPVDLSYRLA--IPTGRTVIHVSN 607



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 44/156 (28%)

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDL------------------------------ 360
           +   G ++       E +      SP G                                
Sbjct: 33  LPPPGGEKPIAFDVHEGTSMAVSVSPDGKWLAVDLQGSLWIIPAKGGKAKRITDYFNDAR 92

Query: 361 ----------IAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRK 409
                     +A+  +    + +  +K DGS  R L +   + + P WSP GR++ FS  
Sbjct: 93  QPVWSPDGSRLAYFAYRDGGYDLWTIKPDGSDMRKLTQGAWDDREPAWSPDGRTIAFSSD 152

Query: 410 KDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
           + G     ++++D+ +G  + + + P     P W  
Sbjct: 153 RSG--NYDIWTLDVASGAVKQVSSNPREDRMPSWSP 186


>gi|218679898|ref|ZP_03527795.1| putative periplasmic component of the Tol biopolymer transport
           system protein [Rhizobium etli CIAT 894]
          Length = 276

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 86/230 (37%), Gaps = 16/230 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L  +  DG  +  +              SP+  ++  +   +     +Y++         
Sbjct: 45  LYRLPLDGGEVVQVDTGFAVNCNNDHGISPDGTEIVISDKTEFGKSSIYILPIEGGTPRL 104

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
              N  S      +S +G++      +D+  DIY++ +      RLT     N    YS 
Sbjct: 105 VTENQPSYWHG--WSPDGRQLAYCGIRDDFFDIYTISVDGGVETRLTYGEGRNDGPDYSA 162

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I F S R G  Q++ +  +G+  ++++ D + ++F    SP+ D +    +    F
Sbjct: 163 DGQWIYFNSSRTGLMQIWRIHPDGTGLEQVTSDNQGNWFA-HPSPKNDKVLILSYDPGVF 221

Query: 372 --------AIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRK 409
                    + +M+ DG   + L E       +  P WSP G    + R 
Sbjct: 222 DHPRDLDVRLRLMEMDGGNLKTLFELFGGQGTINVPCWSPDGDEFAYVRY 271



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 86/201 (42%), Gaps = 15/201 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V + + +  RA + +     ++ AP F+ +G   L+    +    +Y + L      ++
Sbjct: 4   SVEIYNVKTGRA-REVWQTDRLVEAPNFAPDGSYLLL----NGDGLLYRLPLDGGEVVQV 58

Query: 298 TNTLFINIS--ASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                +N +     SPD ++IV  SD+   GK  +Y++   G   + +++++ + +    
Sbjct: 59  DTGFAVNCNNDHGISPDGTEIV-ISDKTEFGKSSIYILPIEGGTPRLVTENQPSYWHG-- 115

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG 412
           WSP G  +A+     + F I  +  DG  E  L         P +S  G+ + F+  + G
Sbjct: 116 WSPDGRQLAYCGIRDDFFDIYTISVDGGVETRLTYGEGRNDGPDYSADGQWIYFNSSRTG 175

Query: 413 DTGSKLYSIDLNGRNETLINT 433
               +++ I  +G     + +
Sbjct: 176 LM--QIWRIHPDGTGLEQVTS 194



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 15/169 (8%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             ++++     +  T  +  + +++PD S ++      G   LY +  +G +  ++    
Sbjct: 7   IYNVKTGRAREVWQTDRLVEAPNFAPDGSYLLLN----GDGLLYRLPLDGGEVVQVDTGF 62

Query: 346 EASYFDPV-WSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             +  +    SP G  I  + K    K +I ++  +G   RL+ E+       WSP GR 
Sbjct: 63  AVNCNNDHGISPDGTEIVISDKTEFGKSSIYILPIEGGTPRLVTENQPSYWHGWSPDGRQ 122

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           L +   +D      +Y+I ++G  ET +         P Y++D QW+ F
Sbjct: 123 LAYCGIRDDFF--DIYTISVDGGVETRLTYGEGRNDGPDYSADGQWIYF 169


>gi|332534941|ref|ZP_08410760.1| hypothetical protein PH505_bx00100 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035614|gb|EGI72105.1| hypothetical protein PH505_bx00100 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 1059

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/210 (23%), Positives = 84/210 (40%), Gaps = 25/210 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I   +   +    S +GK  +  +  D    IY++ +      +LT+ +   +   +SP+
Sbjct: 44  ISVEQGTWMNIDISPDGKTVVFDLLGD----IYTMPMSGGTATKLTSDIAWQMQPRFSPN 99

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFS 367
              I F SD+ G + +++M  NG +Q  ++ +       P WSP GD +          S
Sbjct: 100 GKSIAFTSDQGGGDNIWIMDLNGENQHAVTDETFRLLNSPAWSPDGDYLVARKHFTASRS 159

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTG 415
                + +  K G +   L +  N Q     P +SP GR + FS             D+ 
Sbjct: 160 LGAGEVWLYHKAGGKGVQLTKRENDQKDLGEPMFSPDGRYVYFSHDATPGKTFHYSKDSV 219

Query: 416 SKLYSIDL----NGRNETLINTPAYASDPQ 441
           + +Y I       G  ET+I+T   A  P 
Sbjct: 220 AGIYKIKRYDRETGEIETIIDTMGGAIRPT 249



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 95/235 (40%), Gaps = 30/235 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+ + V +    D     +Y M      A K + +  +  + PRFS NGK    +  +
Sbjct: 56  ISPDGKTVVFDLLGD-----IYTMPMSGGTATK-LTSDIAWQMQPRFSPNGKSIAFTSDQ 109

Query: 279 DEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVMQ 332
               +I+ +DL       +T+  F +  S ++SPD   +V    F + R  G  ++++  
Sbjct: 110 GGGDNIWIMDLNGENQHAVTDETFRLLNSPAWSPDGDYLVARKHFTASRSLGAGEVWLYH 169

Query: 333 SNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVMK 377
             G    ++++ +       +P++SP G  + F+  +                + I    
Sbjct: 170 KAGGKGVQLTKRENDQKDLGEPMFSPDGRYVYFSHDATPGKTFHYSKDSVAGIYKIKRYD 229

Query: 378 KDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           ++  +   +++       PT SP G+ L + ++ D  T   LY  DL     T +
Sbjct: 230 RETGEIETIIDTMGGAIRPTPSPDGKKLAYIKRDDFQT--SLYLYDLTSGEHTKL 282



 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 55/396 (13%), Positives = 120/396 (30%), Gaps = 96/396 (24%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++G  +    +     A  ++ DI   +          I F S+          + +MD 
Sbjct: 67  LLGDIYTMPMSGG--TATKLTSDIAWQMQPRFSPNGKSIAFTSDQGGGDN----IWIMDL 120

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVA----YATYDDEDILRVYLMDTRIDRAPKRI- 253
           +G N   +T    ++L  P +SP+   +     +          V+L      +  +   
Sbjct: 121 NGENQHAVTDETFRLLNSPAWSPDGDYLVARKHFTASRSLGAGEVWLYHKAGGKGVQLTK 180

Query: 254 -GNFRSMILAPRFSSNGKRALIS----------VQKD---EAMDIYSVDLQSNATERLTN 299
             N +  +  P FS +G+    S            KD       I   D ++   E + +
Sbjct: 181 RENDQKDLGEPMFSPDGRYVYFSHDATPGKTFHYSKDSVAGIYKIKRYDRETGEIETIID 240

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----------SQDKEASY 349
           T+   I  + SPD  ++ +    + +  LY+      +  ++          +      Y
Sbjct: 241 TMGGAIRPTPSPDGKKLAYIKRDDFQTSLYLYDLTSGEHTKLYDKLERDMQETWAIHGVY 300

Query: 350 FDPVWSPQGDLIAF------------------------------------TKFSGEKFAI 373
               W+P  + + F                                         ++F +
Sbjct: 301 PTIAWTPDNEELVFWAGGTIHKLDVADKSVKTIPFKVQTSKKIQKAVRFTQNLDTDEFDV 360

Query: 374 GV-----MKKDG------------------SQERLLVEDSNLQ--APTWSPSGRSLIFSR 408
            +     +  DG                   + + L + ++     P +S  G+ ++++ 
Sbjct: 361 KMLRNVQVSPDGETAIFEALGHIYKRDLESGKIKRLTKQTDHYELFPQYSRDGKKIVYTT 420

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             D   GS       +GR +T+   P    +P +  
Sbjct: 421 WDDNKQGSVRVVSARSGRGDTVTKEPGKYVEPTFSP 456



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 88/267 (32%), Gaps = 51/267 (19%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR----------SMILAP 263
              P  SP+ +K+AY   DD     +YL D       K                 +    
Sbjct: 245 AIRPTPSPDGKKLAYIKRDDFQT-SLYLYDLTSGEHTKLYDKLERDMQETWAIHGVYPTI 303

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATE----------------RLTNTLFIN--- 304
            ++ + +  +          I+ +D+   + +                R T  L  +   
Sbjct: 304 AWTPDNEELVFWA----GGTIHKLDVADKSVKTIPFKVQTSKKIQKAVRFTQNLDTDEFD 359

Query: 305 ----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                +   SPD    +FE+       +Y         KR+++  +     P +S  G  
Sbjct: 360 VKMLRNVQVSPDGETAIFEA----LGHIYKRDLESGKIKRLTKQTDHYELFPQYSRDGKK 415

Query: 361 IAFTKFSGEKF-AIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG------ 412
           I +T +   K  ++ V+    G  + +  E      PT+SP G+++++ +   G      
Sbjct: 416 IVYTTWDDNKQGSVRVVSARSGRGDTVTKEPGKYVEPTFSPDGKTVVYRKATGGSILNPK 475

Query: 413 -DTGSKLYSIDLNGRNETLINTPAYAS 438
                 +YS+   G    LI+   Y  
Sbjct: 476 WSLNPGVYSVSAKGGKSELISKSGYQP 502



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 70/200 (35%), Gaps = 20/200 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +   +          +Y  D    +  +         L P++S +GK+ + +   D
Sbjct: 369 SPDGETAIFEALGH-----IYKRDLESGKIKRLTKQTDHYELFPQYSRDGKKIVYTTWDD 423

Query: 280 E-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---------KEQLY 329
                +  V  +S   + +T      +  ++SPD   +V+     G            +Y
Sbjct: 424 NKQGSVRVVSARSGRGDTVTKEPGKYVEPTFSPDGKTVVYRKATGGSILNPKWSLNPGVY 483

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            + + G   + IS+      F        +   F      K  + V++ +  + R L E 
Sbjct: 484 SVSAKGGKSELISKSGYQPQFG-----DANDRVFIMSPWPKPTLSVVELESKKVRKLYES 538

Query: 390 SNLQAPTWSPSGRSLIFSRK 409
            +      SP G+ L F+ +
Sbjct: 539 EHATEFRVSPDGQYLAFAER 558



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSL 404
           + ++ +   SP G  + F         I  M   G     L  D   Q  P +SP+G+S+
Sbjct: 48  QGTWMNIDISPDGKTVVFDLLGD----IYTMPMSGGTATKLTSDIAWQMQPRFSPNGKSI 103

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
            F+  + G  G  ++ +DLNG N+  +    +   + P W  
Sbjct: 104 AFTSDQGG--GDNIWIMDLNGENQHAVTDETFRLLNSPAWSP 143


>gi|88812601|ref|ZP_01127849.1| WD40-like Beta Propeller [Nitrococcus mobilis Nb-231]
 gi|88790195|gb|EAR21314.1| WD40-like Beta Propeller [Nitrococcus mobilis Nb-231]
          Length = 358

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 109/287 (37%), Gaps = 46/287 (16%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD------- 232
           + +S   G   +++  MD +G N+R ++  +         +PN + + YA+         
Sbjct: 70  IFQSTRDGRACDAIYRMDTEGHNVRRVSSGKGATTCSF-IAPNGRSIIYASTHLAGERCP 128

Query: 233 -DEDILRVYLMDTRIDR----------APKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
              D  + Y+                  P R+ +         +S  G + + +  +   
Sbjct: 129 TKPDRSQGYVWPLYPGYDIFRAGPEGENPARLTDTPGYDAEGVYSPLGDKIVFTSMRTGD 188

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------------------R 322
           ++++ ++   +  E+LT+    +  A +S D   +V+ +                    R
Sbjct: 189 LELFMMNPDGSTVEQLTDEPGYDGGAFFSRDGQWLVWRASRPQDKALEDYRRLLRQGLVR 248

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKK 378
            G+ ++Y+M  N     +++ +  A+ F P W P G  I F+      SG  F + +M  
Sbjct: 249 PGRLEIYIMNLNERQPIQLTDNGAAN-FAPYWHPDGQHIVFSSNMHDPSGRNFDLYLMDV 307

Query: 379 DGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGD--TGSKLYSID 422
           +      L         P +S  G+ L+F+  ++G     + ++ +D
Sbjct: 308 ETRALEQLTYYPGFDGFPMFSHDGKKLVFASNRNGTVAGETNVFIVD 354



 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/286 (18%), Positives = 96/286 (33%), Gaps = 46/286 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            +IR LT           FS +  ++ + +  D                 +R+ + +   
Sbjct: 46  QHIRQLTFGGQNAEAY--FSFDGTELIFQSTRDGRACDAIYRMDTEGHNVRRVSSGKGAT 103

Query: 261 LAPRFSSNGKRALISVQK--------------------DEAMDIYSVDLQSNATERLTNT 300
                + NG+  + +                           DI+    +     RLT+T
Sbjct: 104 TCSFIAPNGRSIIYASTHLAGERCPTKPDRSQGYVWPLYPGYDIFRAGPEGENPARLTDT 163

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              +    YSP   +IVF S R G  +L++M  +GS  ++++ D+        +S  G  
Sbjct: 164 PGYDAEGVYSPLGDKIVFTSMRTGDLELFMMNPDGSTVEQLT-DEPGYDGGAFFSRDGQW 222

Query: 361 IAFTK-------------------FSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPS 400
           + +                         +  I +M  +  Q   L ++     AP W P 
Sbjct: 223 LVWRASRPQDKALEDYRRLLRQGLVRPGRLEIYIMNLNERQPIQLTDNGAANFAPYWHPD 282

Query: 401 GRSLIFSRKKDGDTGSK--LYSIDLNGRN-ETLINTPAYASDPQWV 443
           G+ ++FS      +G    LY +D+  R  E L   P +   P + 
Sbjct: 283 GQHIVFSSNMHDPSGRNFDLYLMDVETRALEQLTYYPGFDGFPMFS 328


>gi|327190629|gb|EGE57717.1| putative periplasmic component of the Tol biopolymer transport
           system protein [Rhizobium etli CNPAF512]
          Length = 276

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 86/230 (37%), Gaps = 16/230 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L  +  DG  +  +              SP+  ++  +   +     +Y++         
Sbjct: 45  LFRLPLDGGEVIQVDTGFAVNCNNDHGISPDGTEIVISDKSEFGKSSIYILPIEGGTPRL 104

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
              N  S      +S +G++      +D+  DIY++ +      RLT+    N    YS 
Sbjct: 105 VTENQPSYWHG--WSPDGRQLAYCGIRDDLFDIYTISVDGGIETRLTHGEGRNDGPDYSA 162

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I F S R G  Q++ +  +G+  ++++ D + ++F    SP+ D +    +    F
Sbjct: 163 DGQWIYFNSSRTGLMQIWRIHPDGTGLEQVTSDNQGNWFA-HPSPKNDKVLILSYDPSVF 221

Query: 372 --------AIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRK 409
                    + +M  DG   + L E       +  P WSP G    + R 
Sbjct: 222 DHPRDLDVRLRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGDEFAYVRY 271



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 86/201 (42%), Gaps = 15/201 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V + + +  RA + +     ++ AP F+ +G   L+    +    ++ + L      ++
Sbjct: 4   SVEIYNVKTGRA-REVWQTDRLVEAPNFAPDGSYLLL----NGDGLLFRLPLDGGEVIQV 58

Query: 298 TNTLFINIS--ASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                +N +     SPD ++IV  SD+   GK  +Y++   G   + +++++ + +    
Sbjct: 59  DTGFAVNCNNDHGISPDGTEIV-ISDKSEFGKSSIYILPIEGGTPRLVTENQPSYWHG-- 115

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG 412
           WSP G  +A+     + F I  +  DG  E  L         P +S  G+ + F+  + G
Sbjct: 116 WSPDGRQLAYCGIRDDLFDIYTISVDGGIETRLTHGEGRNDGPDYSADGQWIYFNSSRTG 175

Query: 413 DTGSKLYSIDLNGRNETLINT 433
               +++ I  +G     + +
Sbjct: 176 LM--QIWRIHPDGTGLEQVTS 194



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 15/169 (8%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             ++++     +  T  +  + +++PD S ++      G   L+ +  +G +  ++    
Sbjct: 7   IYNVKTGRAREVWQTDRLVEAPNFAPDGSYLLLN----GDGLLFRLPLDGGEVIQVDTGF 62

Query: 346 EASYFDPV-WSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             +  +    SP G  I  +  S   K +I ++  +G   RL+ E+       WSP GR 
Sbjct: 63  AVNCNNDHGISPDGTEIVISDKSEFGKSSIYILPIEGGTPRLVTENQPSYWHGWSPDGRQ 122

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           L +   +D      +Y+I ++G  ET +         P Y++D QW+ F
Sbjct: 123 LAYCGIRDD--LFDIYTISVDGGIETRLTHGEGRNDGPDYSADGQWIYF 169


>gi|86357985|ref|YP_469877.1| putative periplasmic component of the Tol biopolymer transport
           system [Rhizobium etli CFN 42]
 gi|86282087|gb|ABC91150.1| putative periplasmic component of the Tol biopolymer transport
           system [Rhizobium etli CFN 42]
          Length = 275

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 87/230 (37%), Gaps = 16/230 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L  +  DG  +  +              SP+  ++  +   +     +Y++         
Sbjct: 45  LFRLPLDGGEVVRVDTGFAVNCNNDHGISPDGTEIVISDKSEFGKSAIYILPIEGGTPRL 104

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
              N  S      +S +G++      +D+  DIY++ +   A  RLT+    N    YS 
Sbjct: 105 VTRNQPSYWHG--WSPDGRQLAYCGIRDDLFDIYTISVDGGAETRLTHGEGRNDGPDYSA 162

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I F S R G  Q++ +  +G+  ++++ D + ++F    SP+ D +    +    F
Sbjct: 163 DGQWIYFNSSRTGLMQIWRIHPDGTGLEQVTSDNQGNWFA-HPSPRNDKVLILSYDPSVF 221

Query: 372 --------AIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRK 409
                    + +M  DG   + L E       +  P WSP G    + R 
Sbjct: 222 DHPRDLDVRLRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGEEFAYVRY 271



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 85/206 (41%), Gaps = 17/206 (8%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
               + +Y + T      + +     ++ AP FS +G   L+    +    ++ + L   
Sbjct: 1   MRSSVEIYNVGT---GRAREVWQTDRLVEAPNFSPDGSYLLL----NGDGLLFRLPLDGG 53

Query: 293 ATERLTNTLFINIS--ASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEAS 348
              R+     +N +     SPD ++IV  SD+   GK  +Y++   G   + +++++ + 
Sbjct: 54  EVVRVDTGFAVNCNNDHGISPDGTEIV-ISDKSEFGKSAIYILPIEGGTPRLVTRNQPSY 112

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFS 407
           +    WSP G  +A+     + F I  +  DG  E  L         P +S  G+ + F+
Sbjct: 113 WHG--WSPDGRQLAYCGIRDDLFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYFN 170

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINT 433
             + G    +++ I  +G     + +
Sbjct: 171 SSRTGLM--QIWRIHPDGTGLEQVTS 194



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 71/169 (42%), Gaps = 15/169 (8%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             ++ +     +  T  +  + ++SPD S ++      G   L+ +  +G +  R+    
Sbjct: 7   IYNVGTGRAREVWQTDRLVEAPNFSPDGSYLLLN----GDGLLFRLPLDGGEVVRVDTGF 62

Query: 346 EASYFDPV-WSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             +  +    SP G  I  +  S   K AI ++  +G   RL+  +       WSP GR 
Sbjct: 63  AVNCNNDHGISPDGTEIVISDKSEFGKSAIYILPIEGGTPRLVTRNQPSYWHGWSPDGRQ 122

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           L +   +D      +Y+I ++G  ET +         P Y++D QW+ F
Sbjct: 123 LAYCGIRDD--LFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYF 169



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 192 SLCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATY 231
            L +MD DG N++ L         +  P +SP+ ++ AY  Y
Sbjct: 230 RLRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGEEFAYVRY 271


>gi|254444922|ref|ZP_05058398.1| hypothetical protein VDG1235_3165 [Verrucomicrobiae bacterium
           DG1235]
 gi|198259230|gb|EDY83538.1| hypothetical protein VDG1235_3165 [Verrucomicrobiae bacterium
           DG1235]
          Length = 504

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 92/208 (44%), Gaps = 17/208 (8%)

Query: 220 SPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALISVQ 277
           S +  ++A + +  D     +Y +       P++I +          ++ + K+ + + Q
Sbjct: 295 SFDGSQMAISHHLGDARTSTLYTLPVSGSDNPRQITDPANGHSFLHGWTPDAKKLIFTGQ 354

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +++  +I+++D+++     LTN   ++    Y+PD   + F S R G  Q++ M+++GS+
Sbjct: 355 RNDQWNIWTIDIETKKEVALTNNNTLDDGPEYTPDGKYVYFNSVRTGTMQIWRMKADGSE 414

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFS----------GEKFAIGVMKKDGSQERLLV 387
           Q++++ D    +F P +SP G  + +  F            +K  + +M   G   + + 
Sbjct: 415 QEQVTFDAYNDWF-PHFSPDGKWMVYISFPVDIDPNDHPFYKKVYLRLMPASGGVPKTIA 473

Query: 388 ----EDSNLQAPTWSPSGRSLIFSRKKD 411
                   +  P+WSP    + F     
Sbjct: 474 YLYGGQGTINVPSWSPDSSKIAFVSNTQ 501



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 106/260 (40%), Gaps = 26/260 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVA----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           ++     +++   RFS  +  +     +  Y D    R+ +MD       K + N  + I
Sbjct: 189 FICSHNAEVMETARFSNVRVVIPAATDFQPYRDYIGSRLEIMDVHSG-HRKVLHNAPNSI 247

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--INISASYSPDSSQIVF 318
            AP ++ +GK  +     +    +Y+ DL S +   L        N     S D SQ+  
Sbjct: 248 QAPNWTIDGKTLIY----NSEGKLYNYDLASGSISELNTGFADQNNNDHVLSFDGSQMA- 302

Query: 319 ESDREGKEQ---LYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            S   G  +   LY +  +GS + ++I+       F   W+P    + FT    +++ I 
Sbjct: 303 ISHHLGDARTSTLYTLPVSGSDNPRQITDPANGHSFLHGWTPDAKKLIFTGQRNDQWNIW 362

Query: 375 VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN- 432
            +  +  +E  L  + +    P ++P G+ + F+  + G    +++ +  +G  +  +  
Sbjct: 363 TIDIETKKEVALTNNNTLDDGPEYTPDGKYVYFNSVRTGTM--QIWRMKADGSEQEQVTF 420

Query: 433 ------TPAYASDPQWVGFM 446
                  P ++ D +W+ ++
Sbjct: 421 DAYNDWFPHFSPDGKWMVYI 440



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 80/195 (41%), Gaps = 15/195 (7%)

Query: 186 SGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                ++L  +   G+ N R +T   +   F   ++P+ +K+ +    + D   ++ +D 
Sbjct: 308 GDARTSTLYTLPVSGSDNPRQITDPANGHSFLHGWTPDAKKLIFTGQRN-DQWNIWTIDI 366

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +    + N  ++   P ++ +GK    +  +   M I+ +    +  E++T   + +
Sbjct: 367 ETKKEVA-LTNNNTLDDGPEYTPDGKYVYFNSVRTGTMQIWRMKADGSEQEQVTFDAYND 425

Query: 305 ISASYSPDSSQIVFES---DREGKEQ-------LYVMQSNGSDQKRIS--QDKEASYFDP 352
               +SPD   +V+ S   D +  +        L +M ++G   K I+     + +   P
Sbjct: 426 WFPHFSPDGKWMVYISFPVDIDPNDHPFYKKVYLRLMPASGGVPKTIAYLYGGQGTINVP 485

Query: 353 VWSPQGDLIAFTKFS 367
            WSP    IAF   +
Sbjct: 486 SWSPDSSKIAFVSNT 500



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 5/69 (7%)

Query: 167 TGEKGDFNSRILFVSESVVSG---IIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSP 221
               G +   I F  +   +      K  L +M   G   + +         +  P +SP
Sbjct: 430 FSPDGKWMVYISFPVDIDPNDHPFYKKVYLRLMPASGGVPKTIAYLYGGQGTINVPSWSP 489

Query: 222 NQQKVAYAT 230
           +  K+A+ +
Sbjct: 490 DSSKIAFVS 498


>gi|209549595|ref|YP_002281512.1| hypothetical protein Rleg2_2002 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209535351|gb|ACI55286.1| WD40 domain protein beta Propeller [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 276

 Score =  144 bits (363), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 85/230 (36%), Gaps = 16/230 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L  +  DG  +  +              SP+  ++  +   +     +Y++         
Sbjct: 45  LWRLPLDGGEVVKVDTGFAVNCNNDHGISPDGTEIVISDKTEFGKSTIYVLPIEGGTPRL 104

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
              N  S      +S +G +      +++  DIY++ +   A  RLT+    N    YS 
Sbjct: 105 VTENQPSYWHG--WSPDGCQLAYCGIRNDLFDIYTISVDGGAETRLTHGEGRNDGPDYSA 162

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I F S R G  Q++ +  +GS  ++++ D + ++F    SP  D +    +    F
Sbjct: 163 DGQWIYFNSSRTGLMQIWRIHPDGSGLEQVTSDNQGNWFA-HPSPSNDKVLILSYDPSVF 221

Query: 372 --------AIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRK 409
                    + +M  DG   + L E       +  P WSP G    + R 
Sbjct: 222 DHPRDLDVRLRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGEEFAYVRY 271



 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 86/201 (42%), Gaps = 15/201 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V + + R  RA + +     ++ AP FS +G   L+    +    ++ + L      ++
Sbjct: 4   SVEIYNVRTGRA-REVWQTDKLVEAPNFSPDGCYLLL----NGDGLLWRLPLDGGEVVKV 58

Query: 298 TNTLFINIS--ASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                +N +     SPD ++IV  SD+   GK  +YV+   G   + +++++ + +    
Sbjct: 59  DTGFAVNCNNDHGISPDGTEIV-ISDKTEFGKSTIYVLPIEGGTPRLVTENQPSYWHG-- 115

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG 412
           WSP G  +A+     + F I  +  DG  E  L         P +S  G+ + F+  + G
Sbjct: 116 WSPDGCQLAYCGIRNDLFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYFNSSRTG 175

Query: 413 DTGSKLYSIDLNGRNETLINT 433
               +++ I  +G     + +
Sbjct: 176 LM--QIWRIHPDGSGLEQVTS 194



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 70/169 (41%), Gaps = 15/169 (8%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             ++++     +  T  +  + ++SPD   ++      G   L+ +  +G +  ++    
Sbjct: 7   IYNVRTGRAREVWQTDKLVEAPNFSPDGCYLLLN----GDGLLWRLPLDGGEVVKVDTGF 62

Query: 346 EASYFDPV-WSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             +  +    SP G  I  + K    K  I V+  +G   RL+ E+       WSP G  
Sbjct: 63  AVNCNNDHGISPDGTEIVISDKTEFGKSTIYVLPIEGGTPRLVTENQPSYWHGWSPDGCQ 122

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           L +   ++      +Y+I ++G  ET +         P Y++D QW+ F
Sbjct: 123 LAYCGIRND--LFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYF 169



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 192 SLCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATY 231
            L +MD DG N++ L         +  P +SP+ ++ AY  Y
Sbjct: 230 RLRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGEEFAYVRY 271


>gi|159184859|ref|NP_354645.2| tolB protein [Agrobacterium tumefaciens str. C58]
 gi|159140140|gb|AAK87430.2| tolB protein [Agrobacterium tumefaciens str. C58]
          Length = 276

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 15/203 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+    A +   +     +YL+ +          N  S      +S +GK       +
Sbjct: 73  ISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHG--WSPDGKSFTYCGIR 130

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D+  DIYS+D+ S    RLT+    N    YSPD   I F S R G+ Q++ ++ +GS  
Sbjct: 131 DQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV 190

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVE-- 388
           +RI+      +F P  SP GD + F  +  + F         + +M  DG     L +  
Sbjct: 191 ERITDSAYGDWF-PHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLF 249

Query: 389 --DSNLQAPTWSPSGRSLIFSRK 409
                + +P WSP G    + R 
Sbjct: 250 GGQGTMNSPNWSPDGDEFAYVRY 272



 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 81/188 (43%), Gaps = 14/188 (7%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K+++ ++   G   R +T  ++   +   +SP+ +   Y    D  +  +Y MD     
Sbjct: 89  GKSAIYLLPSTGGTPRLMT--KNLPSYWHGWSPDGKSFTYCGIRD-QVFDIYSMDIDSGV 145

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              R+ +       P +S +G+    +  +   M I+ V +  ++ ER+T++ + +    
Sbjct: 146 ET-RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPH 204

Query: 309 YSPDSSQIVFESD--------REGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQG 358
            SP   ++VF S         R+   ++ +M  +G + + +      + +   P WSP G
Sbjct: 205 PSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDG 264

Query: 359 DLIAFTKF 366
           D  A+ ++
Sbjct: 265 DEFAYVRY 272



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 83/206 (40%), Gaps = 16/206 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATER 296
            + + + R  +  + +     +  AP +S +GK  L+    +    +Y + L  + + E+
Sbjct: 4   SIEIFNIRTRKM-RVVWQTPELFEAPNWSPDGKYLLL----NSEGLLYRLSLAGDPSPEK 58

Query: 297 LTNTLFI--NISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           +        N     SPD +     SD    GK  +Y++ S G   + ++++  + +   
Sbjct: 59  VDTGFATICNNDHGISPDGALYA-ISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHG- 116

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
            WSP G    +     + F I  M  D   E  L         P +SP GR + F+  + 
Sbjct: 117 -WSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRT 175

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYA 437
           G    +++ + ++G +   I   AY 
Sbjct: 176 GQM--QIWRVRVDGSSVERITDSAYG 199



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL----CVMDRDGANIRYLTP--SR 210
            I+D  Y            +++FVS           L     +MD DG N+  L      
Sbjct: 192 RITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGG 251

Query: 211 DQILFEPRFSPNQQKVAYATY 231
              +  P +SP+  + AY  Y
Sbjct: 252 QGTMNSPNWSPDGDEFAYVRY 272


>gi|315126925|ref|YP_004068928.1| hypothetical protein PSM_A1853 [Pseudoalteromonas sp. SM9913]
 gi|315015439|gb|ADT68777.1| hypothetical protein PSM_A1853 [Pseudoalteromonas sp. SM9913]
          Length = 1057

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 83/210 (39%), Gaps = 25/210 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I   +   +    S +G+  +  +  D    IY++ +      ++T+ +   +   +SPD
Sbjct: 44  ISVEQGTWMNVDISPDGETLVFDLLGD----IYTMPMSGGKATKITSDIAWQMQPRFSPD 99

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFS 367
              I F SD+ G + +++M  NG +Q  ++ +       P WSP GD +          S
Sbjct: 100 GKHIAFTSDQGGGDNIWIMDVNGENQTAVTDETFRLLNSPAWSPDGDYLVARKHFTASRS 159

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTG 415
                + +  K G +   L +  N Q     P +SP GR + FS             D+ 
Sbjct: 160 LGAGEVWLYHKAGGKGVQLTKRENDQKDLGEPMFSPDGRYVYFSHDATPGKTFHYSKDSV 219

Query: 416 SKLYSIDL----NGRNETLINTPAYASDPQ 441
           + +Y I       G  ET+I+    A  P 
Sbjct: 220 AGIYKIKRYDRETGDIETIISGMGGAIRPT 249



 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 95/235 (40%), Gaps = 30/235 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+ + + +    D     +Y M     +A K I +  +  + PRFS +GK    +  +
Sbjct: 56  ISPDGETLVFDLLGD-----IYTMPMSGGKATK-ITSDIAWQMQPRFSPDGKHIAFTSDQ 109

Query: 279 DEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVMQ 332
               +I+ +D+       +T+  F +  S ++SPD   +V    F + R  G  ++++  
Sbjct: 110 GGGDNIWIMDVNGENQTAVTDETFRLLNSPAWSPDGDYLVARKHFTASRSLGAGEVWLYH 169

Query: 333 SNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVMK 377
             G    ++++ +       +P++SP G  + F+  +                + I    
Sbjct: 170 KAGGKGVQLTKRENDQKDLGEPMFSPDGRYVYFSHDATPGKTFHYSKDSVAGIYKIKRYD 229

Query: 378 KDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           ++    E ++        PT SP G+ L + ++ D  T   LY  DL     T +
Sbjct: 230 RETGDIETIISGMGGAIRPTPSPDGKKLAYIKRDDFQT--SLYLYDLTSGEHTKL 282



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 54/396 (13%), Positives = 122/396 (30%), Gaps = 96/396 (24%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++G  +    +  +  A  I+ DI   +          I F S+          + +MD 
Sbjct: 67  LLGDIYTMPMSGGK--ATKITSDIAWQMQPRFSPDGKHIAFTSDQGGGDN----IWIMDV 120

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVA----YATYDDEDILRVYLMDTRIDRAPKRI- 253
           +G N   +T    ++L  P +SP+   +     +          V+L      +  +   
Sbjct: 121 NGENQTAVTDETFRLLNSPAWSPDGDYLVARKHFTASRSLGAGEVWLYHKAGGKGVQLTK 180

Query: 254 -GNFRSMILAPRFSSNGKRALIS----------VQKD---EAMDIYSVDLQSNATERLTN 299
             N +  +  P FS +G+    S            KD       I   D ++   E + +
Sbjct: 181 RENDQKDLGEPMFSPDGRYVYFSHDATPGKTFHYSKDSVAGIYKIKRYDRETGDIETIIS 240

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----------SQDKEASY 349
            +   I  + SPD  ++ +    + +  LY+      +  ++          +      Y
Sbjct: 241 GMGGAIRPTPSPDGKKLAYIKRDDFQTSLYLYDLTSGEHTKLYDKLERDMQETWAIHGVY 300

Query: 350 FDPVWSPQGDLIAF------------------------------------TKFSGEKFAI 373
               W+P  + + F                                         ++F +
Sbjct: 301 PTIAWTPDNEELVFWAGGTLHKLNVDDKSVSDIAFKVDTTKKIQKAVRFTQNIDTDEFDV 360

Query: 374 GV-----MKKDG------------------SQERLLVEDSNLQ--APTWSPSGRSLIFSR 408
            +     +  DG                   + + L + ++     P +S  G++++++ 
Sbjct: 361 KMLRNVQISPDGETALFEALGYIYKRDLESGKIKRLTKQTDHYELFPQYSRDGKNIVYTT 420

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             D + G+       +GR +T+   P    +P +  
Sbjct: 421 WDDNEQGTVRVVSARSGRGDTITQEPGKYVEPTFSP 456



 Score = 91.6 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 52/296 (17%), Positives = 96/296 (32%), Gaps = 44/296 (14%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             S  S      +   DR+  +I  +  S       P  SP+ +K+AY   DD     +Y
Sbjct: 213 HYSKDSVAGIYKIKRYDRETGDIETII-SGMGGAIRPTPSPDGKKLAYIKRDDFQT-SLY 270

Query: 241 LMDTRIDRAPKRIGNFR----------SMILAPRFSSNGKRALISV----------QKDE 280
           L D       K                 +     ++ + +  +              K  
Sbjct: 271 LYDLTSGEHTKLYDKLERDMQETWAIHGVYPTIAWTPDNEELVFWAGGTLHKLNVDDKSV 330

Query: 281 AMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQIVFESDREGKEQLYVM 331
           +   + VD      + +  T  I+              SPD    +FE+       +Y  
Sbjct: 331 SDIAFKVDTTKKIQKAVRFTQNIDTDEFDVKMLRNVQISPDGETALFEA----LGYIYKR 386

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKK-DGSQERLLVED 389
                  KR+++  +     P +S  G  I +T +   E+  + V+    G  + +  E 
Sbjct: 387 DLESGKIKRLTKQTDHYELFPQYSRDGKNIVYTTWDDNEQGTVRVVSARSGRGDTITQEP 446

Query: 390 SNLQAPTWSPSGRSLIFSRKKDG-------DTGSKLYSIDLNGRNETLINTPAYAS 438
                PT+SP G+++++ +   G            +YS+   G    LI+   Y  
Sbjct: 447 GKYVEPTFSPDGKTVVYRKASGGSILNPKWSLHPGVYSVSAKGGKSELISKSGYQP 502



 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 20/201 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+ +   +     E +  +Y  D    +  +         L P++S +GK  + +   
Sbjct: 368 ISPDGETALF-----EALGYIYKRDLESGKIKRLTKQTDHYELFPQYSRDGKNIVYTTWD 422

Query: 279 D-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQL 328
           D E   +  V  +S   + +T      +  ++SPD   +V+     G            +
Sbjct: 423 DNEQGTVRVVSARSGRGDTITQEPGKYVEPTFSPDGKTVVYRKASGGSILNPKWSLHPGV 482

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y + + G   + IS+      F        D +       +   + V+  +  + R L E
Sbjct: 483 YSVSAKGGKSELISKSGYQPQFGSA----NDRVYIMSPWPKP-TLSVVALESKKVRKLYE 537

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
             +      SP G  L F+ +
Sbjct: 538 SEHATEFRVSPDGEYLAFAER 558



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 9/102 (8%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSL 404
           + ++ +   SP G+ + F         I  M   G +   +  D   Q  P +SP G+ +
Sbjct: 48  QGTWMNVDISPDGETLVFDLLGD----IYTMPMSGGKATKITSDIAWQMQPRFSPDGKHI 103

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
            F+  + G  G  ++ +D+NG N+T +    +   + P W  
Sbjct: 104 AFTSDQGG--GDNIWIMDVNGENQTAVTDETFRLLNSPAWSP 143


>gi|262193783|ref|YP_003264992.1| amidohydrolase [Haliangium ochraceum DSM 14365]
 gi|262077130|gb|ACY13099.1| amidohydrolase [Haliangium ochraceum DSM 14365]
          Length = 1138

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 25/210 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I       ++   S +GK  +     D   D+Y++ +     + LT+ +  ++   YSPD
Sbjct: 83  IDTDEGTWMSLDLSPDGKEIVF----DMLGDLYTLPIAGGEAKPLTSGIAWDMQPRYSPD 138

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFSG 368
              I F SDR G + L+++   G + +++S +       P W+P G  +     FT    
Sbjct: 139 GRFIAFTSDRGGGDNLWIIDRQGENPRQVSSENFRLVNSPAWTPDGQFLVGRKHFTSRRS 198

Query: 369 -EKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTG 415
                + +    G Q   L E  N Q     P +SP GR L FS+          + D  
Sbjct: 199 LGAGEMWLYHIAGGQGVQLTEKQNEQKDTGEPVFSPDGRYLYFSQDSTPGPVFEYNKDPH 258

Query: 416 SKLYSI----DLNGRNETLINTPAYASDPQ 441
           + +YSI       G  ETLI+ P  A  P 
Sbjct: 259 AGIYSIYRLDREEGHLETLISGPGGAVRPT 288



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 99/234 (42%), Gaps = 30/234 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +++ +    D   L +           K + +  +  + PR+S +G+    +  + 
Sbjct: 96  SPDGKEIVFDMLGDLYTLPI------AGGEAKPLTSGIAWDMQPRYSPDGRFIAFTSDRG 149

Query: 280 EAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIV----FESDRE-GKEQLYVMQS 333
              +++ +D Q     ++++  F  + S +++PD   +V    F S R  G  ++++   
Sbjct: 150 GGDNLWIIDRQGENPRQVSSENFRLVNSPAWTPDGQFLVGRKHFTSRRSLGAGEMWLYHI 209

Query: 334 NGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVMKK 378
            G    +++  Q+++    +PV+SP G  + F++ S                ++I  + +
Sbjct: 210 AGGQGVQLTEKQNEQKDTGEPVFSPDGRYLYFSQDSTPGPVFEYNKDPHAGIYSIYRLDR 269

Query: 379 D-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           + G  E L+        PT SP G  + + R+   DT   L+  DL    +  +
Sbjct: 270 EEGHLETLISGPGGAVRPTPSPDGTRMAYVRRIGLDTA--LFVYDLASGEQRPV 321



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 99/272 (36%), Gaps = 36/272 (13%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            ++G + S  L      +   +   L  +   G   + LT S      +PR+SP+ + +A
Sbjct: 85  TDEGTWMSLDLSPDGKEIVFDMLGDLYTLPIAGGEAKPLT-SGIAWDMQPRYSPDGRFIA 143

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAM 282
           + + D      ++++D + +   +       ++ +P ++ +G+  +     + ++   A 
Sbjct: 144 FTS-DRGGGDNLWIIDRQGENPRQVSSENFRLVNSPAWTPDGQFLVGRKHFTSRRSLGAG 202

Query: 283 DIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDRE-------------GKE 326
           +++   +      +LT   N         +SPD   + F  D               G  
Sbjct: 203 EMWLYHIAGGQGVQLTEKQNEQKDTGEPVFSPDGRYLYFSQDSTPGPVFEYNKDPHAGIY 262

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +Y +       + +          P  SP G  +A+ +  G   A+ V      ++R +
Sbjct: 263 SIYRLDREEGHLETLIS-GPGGAVRPTPSPDGTRMAYVRRIGLDTALFVYDLASGEQRPV 321

Query: 387 VEDSNLQA----------PT--WSPSGRSLIF 406
           V   +             PT  W+P  RS++F
Sbjct: 322 VVGLDRDMQETWAIHGVYPTMAWTPDNRSIVF 353



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 79/213 (37%), Gaps = 28/213 (13%)

Query: 173 FNSRILFVSESVVSGIIKNSLC---VMDRDGAN------IRYLTPSRDQILFEPRFSPNQ 223
           F++R+L   +    G          +   D AN       R LT   D   F P FS + 
Sbjct: 401 FHTRMLRSVQVAPDGSAAVYQALGHIYLVDLANGQPKGAPRRLTRDDDVFEFYPSFSRDG 460

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--------- 274
           + + Y  + DE +  V ++  R  R  + + +     + P  S +GK  +          
Sbjct: 461 RSIVYVAWSDERLGSVRMIARRGGR-SRTLTSQPGHYVEPVLSPDGKHLVYRKVGASSVR 519

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG----KEQLYV 330
           +        +Y++ L     ER++ +     S  +  D  ++ F     G    K QL  
Sbjct: 520 AQSYTHDTGLYALSLAGGEPERISRSGN---SPHFGGDGKRVFFLDTEGGGSAQKFQLES 576

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +  +G D++     +  +  +   SP G  +AF
Sbjct: 577 VGIDGKDERV--HLRSDAALEYAVSPDGRWVAF 607



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 95/271 (35%), Gaps = 49/271 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRV--------------YLMDTRIDRAPKRIG-------NF 256
            ++P+ + + +        + +              ++ DTR      R           
Sbjct: 343 AWTPDNRSIVFWAGGKIQRVSIGAKAGEDRVSEIPFHVKDTRTVSKALRSPIEVAPERFH 402

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT----ERLTNTLFI-NISASYSP 311
             M+ + + + +G  A+          IY VDL +        RLT    +     S+S 
Sbjct: 403 TRMLRSVQVAPDGSAAVYQA----LGHIYLVDLANGQPKGAPRRLTRDDDVFEFYPSFSR 458

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   IV+ +  + +     M +    + R    +   Y +PV SP G  + + K      
Sbjct: 459 DGRSIVYVAWSDERLGSVRMIARRGGRSRTLTSQPGHYVEPVLSPDGKHLVYRKVGASSV 518

Query: 372 A---------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS--KLYS 420
                     +  +   G +   +    N  +P +   G+ + F   + G +    +L S
Sbjct: 519 RAQSYTHDTGLYALSLAGGEPERISRSGN--SPHFGGDGKRVFFLDTEGGGSAQKFQLES 576

Query: 421 IDLNGRNETL-INTPAY-----ASDPQWVGF 445
           + ++G++E + + + A      + D +WV F
Sbjct: 577 VGIDGKDERVHLRSDAALEYAVSPDGRWVAF 607



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/325 (15%), Positives = 112/325 (34%), Gaps = 58/325 (17%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++       +        S+  +DR+  ++  L       +  P  SP+  ++AY     
Sbjct: 245 STPGPVFEYNKDPHAGIYSIYRLDREEGHLETLISGPGGAV-RPTPSPDGTRMAYVRRIG 303

Query: 234 EDILRVYLMDTRIDRAPKRIGNFR---------SMILAPRFSSNGKRALISVQKDEAMDI 284
            D           ++ P  +G  R          +     ++ + +  +        +  
Sbjct: 304 LDTALFVYDLASGEQRPVVVGLDRDMQETWAIHGVYPTMAWTPDNRSIVFWA--GGKIQR 361

Query: 285 YSVDLQSNATER----------LTNTLF----INISAS-----------YSPDSSQIVFE 319
            S+  ++                T +      I ++              +PD S  V++
Sbjct: 362 VSIGAKAGEDRVSEIPFHVKDTRTVSKALRSPIEVAPERFHTRMLRSVQVAPDGSAAVYQ 421

Query: 320 SDREGKEQLYVMQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIG 374
           +       +Y++           +R+++D +   F P +S  G  I +  +S E+  ++ 
Sbjct: 422 A----LGHIYLVDLANGQPKGAPRRLTRDDDVFEFYPSFSRDGRSIVYVAWSDERLGSVR 477

Query: 375 VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIF-------SRKKDGDTGSKLYSIDLNGR 426
           ++ + G + R L     +   P  SP G+ L++        R +     + LY++ L G 
Sbjct: 478 MIARRGGRSRTLTSQPGHYVEPVLSPDGKHLVYRKVGASSVRAQSYTHDTGLYALSLAGG 537

Query: 427 NETLI----NTPAYASDPQWVGFMD 447
               I    N+P +  D + V F+D
Sbjct: 538 EPERISRSGNSPHFGGDGKRVFFLD 562


>gi|320107458|ref|YP_004183048.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319925979|gb|ADV83054.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
          Length = 679

 Score =  144 bits (362), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 98/252 (38%), Gaps = 31/252 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--------MILAPRFSSNG 269
            +SP+ +++A+A+        ++++ T    +P+R+ N  +           +PR+S + 
Sbjct: 104 AWSPDSKQIAFASQG-----SIWVVST-SGGSPRRLTNSPAGGGDPRQAADRSPRWSPDA 157

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----EGK 325
              L    +     +  V      T  LT          +SPD S IV+ S +     G+
Sbjct: 158 HWILFQSGRRGINSLLVVSADGATTSFLTGPHDEAGDGRWSPDGSSIVYVSRKKEYFSGR 217

Query: 326 EQLYVMQSNGSDQKR---------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             +  + ++               + +    S    +WSP G  +A    +     I ++
Sbjct: 218 LNVLKLDAHSGLPAGEPTVLYTAPVDRGGGWSIRGAIWSPDGKTLATVLQNSGWNHIYLI 277

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI---N 432
              G Q + + +     + P +SP G+SL F   +     + L++I  NG +   +   +
Sbjct: 278 PAAGGQPKQITDGKFEDEDPAYSPDGKSLAFLSNRGLLEATNLWTIPANGGDAQQVVKFD 337

Query: 433 TPAYASDPQWVG 444
            P  +S PQW  
Sbjct: 338 VPGISSQPQWSP 349



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 53/242 (21%), Positives = 95/242 (39%), Gaps = 28/242 (11%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           NSL V+  DGA   +LT   D+   + R+SP+   + Y +   E       +      + 
Sbjct: 170 NSLLVVSADGATTSFLTGPHDE-AGDGRWSPDGSSIVYVSRKKEYFSGRLNVLKLDAHSG 228

Query: 251 KRIGNFRSMILAPR------------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
              G    +  AP             +S +GK     +Q      IY +       +++T
Sbjct: 229 LPAGEPTVLYTAPVDRGGGWSIRGAIWSPDGKTLATVLQNSGWNHIYLIPAAGGQPKQIT 288

Query: 299 NTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWS 355
           +  F +   +YSPD   + F S+R       L+ + +NG D ++ +  D       P WS
Sbjct: 289 DGKFEDEDPAYSPDGKSLAFLSNRGLLEATNLWTIPANGGDAQQVVKFDVPGISSQPQWS 348

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSN---------LQAPTW-SPSGRS 403
           P    I F   S ++ +  ++++ GSQ   + L   +           +  TW S  G+ 
Sbjct: 349 PDSSSIYFHHQSPQETSDLLVQQIGSQSAPKYLTHTTPKNFSAATQIPERVTWKSKDGKE 408

Query: 404 LI 405
           ++
Sbjct: 409 IV 410



 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 93/267 (34%), Gaps = 29/267 (10%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS-------RDQILFEPR 218
           +T   G  +          ++   + S+ V+   G + R LT S       R      PR
Sbjct: 93  LTSSLGGKSGLAWSPDSKQIAFASQGSIWVVSTSGGSPRRLTNSPAGGGDPRQAADRSPR 152

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+   + + +      +   L+ +        +          R+S +G   +   +K
Sbjct: 153 WSPDAHWILFQS--GRRGINSLLVVSADGATTSFLTGPHDEAGDGRWSPDGSSIVYVSRK 210

Query: 279 ----DEAMDIYSVDLQSN----ATERLTNTL------FINISASYSPDSSQIVFESDREG 324
                  +++  +D  S         L          +    A +SPD   +       G
Sbjct: 211 KEYFSGRLNVLKLDAHSGLPAGEPTVLYTAPVDRGGGWSIRGAIWSPDGKTLATVLQNSG 270

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQ 382
              +Y++ + G   K+I+ D +    DP +SP G  +AF    G  E   +  +  +G  
Sbjct: 271 WNHIYLIPAAGGQPKQIT-DGKFEDEDPAYSPDGKSLAFLSNRGLLEATNLWTIPANGGD 329

Query: 383 ERLLVE---DSNLQAPTWSPSGRSLIF 406
            + +V+         P WSP   S+ F
Sbjct: 330 AQQVVKFDVPGISSQPQWSPDSSSIYF 356



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 75/202 (37%), Gaps = 29/202 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK   ++        I  +  +      LT++L      ++SPDS QI F S   
Sbjct: 64  ALSPDGKTVALTRSG----QIVLLPAEGGWPIPLTSSLGGKSGLAWSPDSKQIAFASQGS 119

Query: 324 GKEQLYVMQSNGSDQKRISQ-------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
               ++V+ ++G   +R++         ++A+   P WSP    I F        ++ V+
Sbjct: 120 ----IWVVSTSGGSPRRLTNSPAGGGDPRQAADRSPRWSPDAHWILFQSGRRGINSLLVV 175

Query: 377 KKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLN-------GRNE 428
             DG+    L    +      WSP G S+++  +K      +L  + L+       G   
Sbjct: 176 SADGATTSFLTGPHDEAGDGRWSPDGSSIVYVSRKKEYFSGRLNVLKLDAHSGLPAGEPT 235

Query: 429 TLINTP-----AYASDPQ-WVG 444
            L   P      ++     W  
Sbjct: 236 VLYTAPVDRGGGWSIRGAIWSP 257


>gi|32699925|sp|Q8UEU8|Y1656_AGRT5 RecName: Full=Uncharacterized protein Atu1656
          Length = 293

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 15/203 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+    A +   +     +YL+ +          N  S      +S +GK       +
Sbjct: 90  ISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHG--WSPDGKSFTYCGIR 147

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D+  DIYS+D+ S    RLT+    N    YSPD   I F S R G+ Q++ ++ +GS  
Sbjct: 148 DQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV 207

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVE-- 388
           +RI+      +F P  SP GD + F  +  + F         + +M  DG     L +  
Sbjct: 208 ERITDSAYGDWF-PHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLF 266

Query: 389 --DSNLQAPTWSPSGRSLIFSRK 409
                + +P WSP G    + R 
Sbjct: 267 GGQGTMNSPNWSPDGDEFAYVRY 289



 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 81/188 (43%), Gaps = 14/188 (7%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K+++ ++   G   R +T  ++   +   +SP+ +   Y    D  +  +Y MD     
Sbjct: 106 GKSAIYLLPSTGGTPRLMT--KNLPSYWHGWSPDGKSFTYCGIRD-QVFDIYSMDIDSGV 162

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              R+ +       P +S +G+    +  +   M I+ V +  ++ ER+T++ + +    
Sbjct: 163 ET-RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPH 221

Query: 309 YSPDSSQIVFESD--------REGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQG 358
            SP   ++VF S         R+   ++ +M  +G + + +      + +   P WSP G
Sbjct: 222 PSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDG 281

Query: 359 DLIAFTKF 366
           D  A+ ++
Sbjct: 282 DEFAYVRY 289



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 83/206 (40%), Gaps = 16/206 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATER 296
            + + + R  +  + +     +  AP +S +GK  L+    +    +Y + L  + + E+
Sbjct: 21  SIEIFNIRTRKM-RVVWQTPELFEAPNWSPDGKYLLL----NSEGLLYRLSLAGDPSPEK 75

Query: 297 LTNTLFI--NISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           +        N     SPD +     SD    GK  +Y++ S G   + ++++  + +   
Sbjct: 76  VDTGFATICNNDHGISPDGALYA-ISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHG- 133

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
            WSP G    +     + F I  M  D   E  L         P +SP GR + F+  + 
Sbjct: 134 -WSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRT 192

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYA 437
           G    +++ + ++G +   I   AY 
Sbjct: 193 GQM--QIWRVRVDGSSVERITDSAYG 216



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL----CVMDRDGANIRYLTP--SR 210
            I+D  Y            +++FVS           L     +MD DG N+  L      
Sbjct: 209 RITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGG 268

Query: 211 DQILFEPRFSPNQQKVAYATY 231
              +  P +SP+  + AY  Y
Sbjct: 269 QGTMNSPNWSPDGDEFAYVRY 289


>gi|126664003|ref|ZP_01734997.1| WD40-like beta Propeller [Flavobacteria bacterium BAL38]
 gi|126623952|gb|EAZ94646.1| WD40-like beta Propeller [Flavobacteria bacterium BAL38]
          Length = 518

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 59/295 (20%), Positives = 104/295 (35%), Gaps = 55/295 (18%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL---RVYLMDTRIDRAPKR----IG 254
           NI+ LT   D       F+P+  K+     +    +   +++++D +     ++    + 
Sbjct: 32  NIKQLTFGGDNAEAY--FNPSGDKLTLQVTNKAFGVSCDQIFMLDLKAQEFNEKSLQLVS 89

Query: 255 NFRSMILAPRFSSNGKRALISVQK---------------------DEAMDIYSVDLQSNA 293
             +       +  +GK  L +                            DIY  DL  N 
Sbjct: 90  TGKGRTTCSYYMPDGKHILYASTHASDHACPAPPKPIEGKYLWAIYPEFDIYIADLNGNI 149

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           T++LTNT   +  A  SPD  +I F S R G  ++Y M  +G++ K+I+           
Sbjct: 150 TKQLTNTPGYDAEAVVSPDGKKIAFTSIRSGDLEIYTMDIDGTNLKQITY-GLGYDGGCF 208

Query: 354 WSPQGDLIAFTKFSGE--------------------KFAIGVMKKDGSQERLLVEDSN-L 392
           +S     I F     +                    +  I     DGS  + +       
Sbjct: 209 FSHDSKKIVFRSSRPKTAEEVKDYKDLLAQNLVAPSEMEIYTCNIDGSDLKQITHLGKAN 268

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGS--KLYSIDLNGRNETLINTPA-YASDPQWVG 444
            AP + PS + +IFS       G   +L+ ID+ G N   I   + + + P +  
Sbjct: 269 WAPYFHPSDKKIIFSSNHHSTRGYDFQLFMIDITGENLQQITWESEFNAFPMFSP 323



 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 99/254 (38%), Gaps = 34/254 (13%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE--PRFSPNQQKVAYATYDDEDILRVYL 241
           V +G  + +      DG +I Y +           P+  P + K  +A Y       +Y+
Sbjct: 88  VSTGKGRTTCSYYMPDGKHILYASTHASDHACPAPPK--PIEGKYLWAIY---PEFDIYI 142

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D       K++ N          S +GK+   +  +   ++IY++D+     +++T  L
Sbjct: 143 ADLN-GNITKQLTNTPGYDAEAVVSPDGKKIAFTSIRSGDLEIYTMDIDGTNLKQITYGL 201

Query: 302 FINISASYSPDSSQIVFESDREGK--------------------EQLYVMQSNGSDQKRI 341
             +    +S DS +IVF S R                        ++Y    +GSD K+I
Sbjct: 202 GYDGGCFFSHDSKKIVFRSSRPKTAEEVKDYKDLLAQNLVAPSEMEIYTCNIDGSDLKQI 261

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKKDGSQERLLV-EDSNLQAPT 396
           +   +A++  P + P    I F+       G  F + ++   G   + +  E      P 
Sbjct: 262 THLGKANW-APYFHPSDKKIIFSSNHHSTRGYDFQLFMIDITGENLQQITWESEFNAFPM 320

Query: 397 WSPSGRSLIFSRKK 410
           +SP G+ L+FS  +
Sbjct: 321 FSPDGKKLVFSSNR 334



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 57/175 (32%), Gaps = 41/175 (23%)

Query: 292 NATERLTNTLFINISASYSPDSSQI-------VF-ESDREGKEQLYVMQSNGSD----QK 339
              ++LT     N  A ++P   ++        F  S     +Q++++     +      
Sbjct: 31  KNIKQLTFG-GDNAEAYFNPSGDKLTLQVTNKAFGVSC----DQIFMLDLKAQEFNEKSL 85

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK---------------------FAIGVMKK 378
           ++    +       + P G  I +                            F I +   
Sbjct: 86  QLVSTGKGRTTCSYYMPDGKHILYASTHASDHACPAPPKPIEGKYLWAIYPEFDIYIADL 145

Query: 379 DGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +G+  + L            SP G+ + F+  + GD   ++Y++D++G N   I 
Sbjct: 146 NGNITKQLTNTPGYDAEAVVSPDGKKIAFTSIRSGD--LEIYTMDIDGTNLKQIT 198



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +I+F S    +      L ++D  G N++ +T   +   F P FSP+ +K+ +++   
Sbjct: 277 DKKIIFSSNHHSTRGYDFQLFMIDITGENLQQITWESEFNAF-PMFSPDGKKLVFSSNRM 335

Query: 234 EDILR 238
           +   R
Sbjct: 336 QSKPR 340


>gi|242037461|ref|XP_002466125.1| hypothetical protein SORBIDRAFT_01g001880 [Sorghum bicolor]
 gi|241919979|gb|EER93123.1| hypothetical protein SORBIDRAFT_01g001880 [Sorghum bicolor]
          Length = 690

 Score =  143 bits (361), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 72/385 (18%), Positives = 140/385 (36%), Gaps = 53/385 (13%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
            P  I  F    S GA  LV     + G D   +E  + DV          +F    +  
Sbjct: 285 TPPGIHAFTPAASPGAPGLVAVATRRPGSDYRHIE--VIDVSGGGG-ANAAYFDVTRAVA 341

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
             AH  +  I        G    R    S +  S ++  S+     D  ++  +  S   
Sbjct: 342 PRAHHFNPFISPD-GERVGYHRCRG---SGNGDSPLLLESIKSPAPDTFSLFRIDGS--- 394

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
               P FS + +++A+       +  ++++++      +R+  F        +    K  
Sbjct: 395 ---FPSFSHDGKRIAFV-----GLPGLFVVNSDGSGGRRRV--FSGNAFPTTWDWKRKGV 444

Query: 273 LISV------QKDEAMDIYSVDLQSN-----ATERLTNTLFINISASYSPDSSQIVFESD 321
           + +        +   +D+ +V L  +     + ++LT     N   S SPD   +VF S 
Sbjct: 445 IYTSVGPDFASESTEVDVVAVSLGDDDDPKVSIKKLTVGGENNAFPSPSPDGKWVVFRSG 504

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS----GEKFAIGV 375
           R G + LY+M +   +   I +  E  + D    WSP G+ IAF        G  F I +
Sbjct: 505 RSGHKNLYIMDAEDGEASGIRRLTEGPWSDTMCNWSPDGEWIAFASDRHNPGGGSFGIYM 564

Query: 376 MKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDG------------DTGSKLYS 420
           +  +G+  R +    +      P +SP  ++L+F+                     ++++
Sbjct: 565 VHPNGTGLRRVVHSTDGGRTNHPWFSPDSKTLVFTSDYAAVSAEPISNPHHYQPYGEIFT 624

Query: 421 IDLNGRNETLINTPAY-ASDPQWVG 444
           ++++G     +   ++    P W  
Sbjct: 625 VNIDGSGIRRLTHNSFEDGTPSWTP 649



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 70/235 (29%), Gaps = 36/235 (15%)

Query: 216 EPRFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            P  +P+   + Y +                  +    A +R+        +P  S +G 
Sbjct: 136 RPSLTPDGAHLVYVSTAEPAGSPRRSWAAVYSTSLASGATRRLTPRGVADFSPAVSPSGD 195

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-------SASYSPDSSQIVFESDRE 323
               +       D    DL+++     T+               +++ DS+      D +
Sbjct: 196 WTAAASPGPRGWDGEVEDLRTDIYVFRTSDGSRRTLAVPDAGWPTWADDSTVFFHRRDGD 255

Query: 324 GKEQLYVM------QSNGSDQK-----RISQDKEASYFDPVWSPQ--GDLIAFTKFSGEK 370
           G   +Y          +G         RI+     + F P  SP   G +   T+  G  
Sbjct: 256 GWYGVYRAKLSFTDDDDGGVAVASVVDRITPPGIHA-FTPAASPGAPGLVAVATRRPGSD 314

Query: 371 F-AIGVMKKDGSQ---------ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +  I V+   G            R +   ++   P  SP G  + + R +    G
Sbjct: 315 YRHIEVIDVSGGGGANAAYFDVTRAVAPRAHHFNPFISPDGERVGYHRCRGSGNG 369



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 63/195 (32%), Gaps = 38/195 (19%)

Query: 263 PRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           P  + +G   +     + A         +YS  L S AT RLT     + S + SP    
Sbjct: 137 PSLTPDGAHLVYVSTAEPAGSPRRSWAAVYSTSLASGATRRLTPRGVADFSPAVSPSGDW 196

Query: 316 IVFES----DREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
               S      +G     +  +YV +++   ++ ++         P W+       F   
Sbjct: 197 TAAASPGPRGWDGEVEDLRTDIYVFRTSDGSRRTLAVPDAG---WPTWADDST--VFFHR 251

Query: 367 SGEKFAIGVMKK--------DGSQE------RLLVEDSNLQAPTWSPSG--RSLIFSRKK 410
                  GV +         DG         R+     +   P  SP G    +  + ++
Sbjct: 252 RDGDGWYGVYRAKLSFTDDDDGGVAVASVVDRITPPGIHAFTPAASP-GAPGLVAVATRR 310

Query: 411 DGDTGSKLYSIDLNG 425
            G     +  ID++G
Sbjct: 311 PGSDYRHIEVIDVSG 325



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 61/185 (32%), Gaps = 39/185 (21%)

Query: 296 RLTNTLFINISASYS-----PDSSQIVFESDREGKEQLYV--MQSNGSDQKR-------- 340
           RLT+ + +N + +++      +   ++F S+R G   LY   +  + S  +R        
Sbjct: 58  RLTDGVSVNYNGNFAPSSSSSEPPSLLFVSERNGSLNLYRTPVPLSASAARRREALEEED 117

Query: 341 --------ISQDKEASYFDPVWSPQGDLIAFTKF-----SGEKFAIGVMK---KDGSQER 384
                   +  D  A    P  +P G  + +        S  +    V       G+  R
Sbjct: 118 DSPTLTPLLPWDPIALKDRPSLTPDGAHLVYVSTAEPAGSPRRSWAAVYSTSLASGATRR 177

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSR-------KKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           L        +P  SPSG     +         +  D  + +Y    +  +   +  P  A
Sbjct: 178 LTPRGVADFSPAVSPSGDWTAAASPGPRGWDGEVEDLRTDIYVFRTSDGSRRTLAVP-DA 236

Query: 438 SDPQW 442
             P W
Sbjct: 237 GWPTW 241


>gi|149921634|ref|ZP_01910083.1| WD40-like repeat/amidohydrolase domain protein [Plesiocystis
           pacifica SIR-1]
 gi|149817478|gb|EDM76948.1| WD40-like repeat/amidohydrolase domain protein [Plesiocystis
           pacifica SIR-1]
          Length = 1128

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 59/254 (23%), Positives = 101/254 (39%), Gaps = 30/254 (11%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           RD  +  P +  +    A  + D++   +V                   M L    S +G
Sbjct: 2   RDAGMEPPEWCADGD--ASVSADEDCTWKVDSPPGTPKEVTLDTSTGTWMNL--DVSPDG 57

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              +  +  D    +YS+ +     + LT  +  ++   +SPD   + F SDR G + L+
Sbjct: 58  ATIVFDLLGD----LYSLPMAGGEAKALTEGVAWDMQPRFSPDGQWLAFTSDRGGGDNLW 113

Query: 330 VMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIA----FTKFSG-EKFAIGVMKKDGSQE 383
           VM ++GSD+ R ++ +       P WSP G+ +     FT         + +  + G + 
Sbjct: 114 VMPADGSDEPRPVTSESFRLITAPAWSPDGEYLVGRKHFTSRRSIGSGEMWLYHRSGGKG 173

Query: 384 RLL----VEDSNLQAPTWSPSGRSLIFSRK--------KDGDTGSKLYSI---DL-NGRN 427
             L     E  +   P +SP GR L FS           + D   ++Y+I   DL  GR 
Sbjct: 174 VQLTKKRTEQKDSGEPVFSPDGRYLYFSEDMTPGGVFEYNKDPNGQIYAIRRLDLEEGRL 233

Query: 428 ETLINTPAYASDPQ 441
           E+++  P  A  P 
Sbjct: 234 ESIVGGPGGAVRPT 247



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 55/351 (15%), Positives = 105/351 (29%), Gaps = 59/351 (16%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF--VSESVVSGIIKNSLCVMDR 198
           G   +  PA        ++ + ++ IT      +   L      +    I    + +  R
Sbjct: 109 GDNLWVMPADGSDEPRPVTSESFRLITAPAWSPDGEYLVGRKHFTSRRSIGSGEMWLYHR 168

Query: 199 DGANIRYLTPSR--DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR---- 252
            G     LT  R   +   EP FSP+ + + ++       +  Y  D        R    
Sbjct: 169 SGGKGVQLTKKRTEQKDSGEPVFSPDGRYLYFSEDMTPGGVFEYNKDPNGQIYAIRRLDL 228

Query: 253 -------IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  I       + P  S +GK      +      ++  +L+S     + + L  ++
Sbjct: 229 EEGRLESIVGGPGGAVRPTPSPDGKYLAYVRRVRLKSVLFVRELESGKEWPVYDALDRDM 288

Query: 306 SASYS-----------PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS------ 348
             +++           PD   IVF S      +++ +   G +   I    E +      
Sbjct: 289 QETWAIHGVYPQMDWTPDGEAIVFWS----GGKIHKVGREGGEATIIDFHVEHTRTVYEA 344

Query: 349 ----------------YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                              P  SP G  + +         + V      + R L      
Sbjct: 345 RRNAVEVAPESFDVKVLRWPQLSPDGSKVVYQALG----KLHVRDMQSGEVRRLTTQDEH 400

Query: 393 QA--PTWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTPAYASDP 440
               P+ S  GR + +    D   GS ++  I+       +  TP +  +P
Sbjct: 401 MEYYPSLSRDGRFVTYVSWDDEQLGSVRVVPIEGGAEGRVVTPTPGHYVEP 451



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 97/274 (35%), Gaps = 50/274 (18%)

Query: 209 SRDQILFEPRFSPNQQKVAYAT-YDDEDILRV--------YLMDTRIDRAPKRIGNFRSM 259
                   P  SP+ + +AY      + +L V        + +   +DR  +       +
Sbjct: 238 GGPGGAVRPTPSPDGKYLAYVRRVRLKSVLFVRELESGKEWPVYDALDRDMQETWAIHGV 297

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL------TNT------LFINISA 307
                ++ +G+  +          I+ V  +      +      T T        + ++ 
Sbjct: 298 YPQMDWTPDGEAIVFWS----GGKIHKVGREGGEATIIDFHVEHTRTVYEARRNAVEVAP 353

Query: 308 --------SY---SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                    +   SPD S++V+++      +L+V      + +R++   E   + P  S 
Sbjct: 354 ESFDVKVLRWPQLSPDGSKVVYQA----LGKLHVRDMQSGEVRRLTTQDEHMEYYPSLSR 409

Query: 357 QGDLIAFTKFSGEKF-AIGVMKKDGSQE-RLLV-EDSNLQAPTWSPSGRSLIFSRKKDGD 413
            G  + +  +  E+  ++ V+  +G  E R++     +   P  +P   ++++ R + G 
Sbjct: 410 DGRFVTYVSWDDEQLGSVRVVPIEGGAEGRVVTPTPGHYVEPVMAPDNSTVVYRRTRGGG 469

Query: 414 T-------GSKLYSIDLNGRNETLINTPAYASDP 440
                    + +Y++  + +        A A+ P
Sbjct: 470 LMSPRWSENTGIYAVPFDSKPARRGRRGAEAAKP 503



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 82/247 (33%), Gaps = 39/247 (15%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V D     +R LT   + + + P  S + + V Y ++DDE +  V ++        + 
Sbjct: 381 LHVRDMQSGEVRRLTTQDEHMEYYPSLSRDGRFVTYVSWDDEQLGSVRVVPIEGGAEGRV 440

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMD---------IYSVDLQSNATERLTNT--L 301
           +       + P  + +    +    +   +          IY+V   S    R       
Sbjct: 441 VTPTPGHYVEPVMAPDNSTVVYRRTRGGGLMSPRWSENTGIYAVPFDSKPARRGRRGAEA 500

Query: 302 FINISASYSPDSSQIVFESDR------EGKEQ----LYVMQSNGSDQKRISQDKEASYFD 351
              +    S   S+  F +D       +G       L  M  +GS+++     K A    
Sbjct: 501 AKPVETRVSRGGSEPHFGADSERVFLIDGGPDDSRVLVSMALDGSERRE--HAKSARAEQ 558

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT------------WSP 399
              SP G  +AF     E F + V     +   + V  +    P+            WS 
Sbjct: 559 FAVSPDGRWLAFV----EGFRVHVAAFPTTGTTVDVGPNGGGLPSAKVSEQAGWFVHWSG 614

Query: 400 SGRSLIF 406
            G++L +
Sbjct: 615 DGKALHW 621



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 35/108 (32%), Gaps = 14/108 (12%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           ++A    P W   GD    +      + +        +  L            SP G ++
Sbjct: 2   RDAGMEPPEWCADGDASV-SADEDCTWKVDSPPGTPKEVTLDTSTGTWMNLDVSPDGATI 60

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           +F      D    LYS+ + G     +         P ++ D QW+ F
Sbjct: 61  VF------DLLGDLYSLPMAGGEAKALTEGVAWDMQPRFSPDGQWLAF 102


>gi|222086206|ref|YP_002544738.1| periplasmic component of the Tol biopolymer transport system
           [Agrobacterium radiobacter K84]
 gi|221723654|gb|ACM26810.1| periplasmic component of the Tol biopolymer transport system
           [Agrobacterium radiobacter K84]
          Length = 275

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 87/232 (37%), Gaps = 17/232 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           L  +  DG        +    L       SP+   +A +         +Y++        
Sbjct: 45  LYRLALDGKAEPVQVDTSFATLCNNDHGISPDGSLIAISDKTQHGKSCIYVLPAEGGTPR 104

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +   N  S      +S +GKR      ++   DIY++ +      RLT++   N    YS
Sbjct: 105 QVTTNLPSYWHG--WSPDGKRFSYCGIRNNVFDIYTISVDGGEETRLTHSEGRNDGPDYS 162

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D   I F S R G  Q++ +  +G+  ++++ D   ++F    SP+ D +    +  + 
Sbjct: 163 ADGQWIYFNSSRTGLMQIWRIHPDGTGLQQVTSDNYGNWFA-HPSPRNDKVLLISYDPDV 221

Query: 371 F--------AIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKK 410
           F         + +M  DG     L E      ++  P WSP G    + R +
Sbjct: 222 FDHPRDLNVRMRLMDMDGGNLTTLFELFGGQGSINVPNWSPDGDEFAYVRYE 273



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 85/211 (40%), Gaps = 18/211 (8%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
               + +Y + T  +   + +    ++I AP FS +G+  L+    +    +Y + L   
Sbjct: 1   MRSSVEIYNIRTGEN---RIVWQTETLIEAPNFSPDGRYLLL----NGDGLLYRLALDGK 53

Query: 293 -ATERLTNTLFI--NISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEA 347
               ++  +     N     SPD S I   SD+   GK  +YV+ + G   ++++ +  +
Sbjct: 54  AEPVQVDTSFATLCNNDHGISPDGSLIA-ISDKTQHGKSCIYVLPAEGGTPRQVTTNLPS 112

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIF 406
            +    WSP G   ++       F I  +  DG +E  L         P +S  G+ + F
Sbjct: 113 YWHG--WSPDGKRFSYCGIRNNVFDIYTISVDGGEETRLTHSEGRNDGPDYSADGQWIYF 170

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           +  + G    +++ I  +G     + +  Y 
Sbjct: 171 NSSRTGLM--QIWRIHPDGTGLQQVTSDNYG 199



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 89/219 (40%), Gaps = 14/219 (6%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  + ++       +     ++ S  +   K+ + V+  +G   R +T   +   +   +
Sbjct: 60  DTSFATLCNNDHGISPDGSLIAISDKTQHGKSCIYVLPAEGGTPRQVTT--NLPSYWHGW 117

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ ++ +Y    + ++  +Y +         R+ +       P +S++G+    +  + 
Sbjct: 118 SPDGKRFSYCGIRN-NVFDIYTISVD-GGEETRLTHSEGRNDGPDYSADGQWIYFNSSRT 175

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--------VFESDREGKEQLYVM 331
             M I+ +       +++T+  + N  A  SP + ++        VF+  R+   ++ +M
Sbjct: 176 GLMQIWRIHPDGTGLQQVTSDNYGNWFAHPSPRNDKVLLISYDPDVFDHPRDLNVRMRLM 235

Query: 332 QSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSG 368
             +G +   +      + S   P WSP GD  A+ ++  
Sbjct: 236 DMDGGNLTTLFELFGGQGSINVPNWSPDGDEFAYVRYEP 274



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 16/170 (9%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             ++++     +  T  +  + ++SPD   ++      G   LY +  +G  +       
Sbjct: 7   IYNIRTGENRIVWQTETLIEAPNFSPDGRYLLLN----GDGLLYRLALDGKAEPVQVDTS 62

Query: 346 EASY--FDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            A+    D   SP G LIA + K    K  I V+  +G   R +  +       WSP G+
Sbjct: 63  FATLCNNDHGISPDGSLIAISDKTQHGKSCIYVLPAEGGTPRQVTTNLPSYWHGWSPDGK 122

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
              +   ++      +Y+I ++G  ET +         P Y++D QW+ F
Sbjct: 123 RFSYCGIRNN--VFDIYTISVDGGEETRLTHSEGRNDGPDYSADGQWIYF 170


>gi|262194812|ref|YP_003266021.1| serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
 gi|262078159|gb|ACY14128.1| serine/threonine protein kinase [Haliangium ochraceum DSM 14365]
          Length = 969

 Score =  143 bits (360), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 99/274 (36%), Gaps = 19/274 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +      L  +D      R +    D    +P +SP   ++AY    +    R     +
Sbjct: 547 PNSRSPGELWTIDLASGRRRRV---ADADATQPAWSPGGHRIAYWGLPEGGSQRDIWTVS 603

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------NATERLT 298
                P  + +   +   P +S +G+    +  +  + +++ V +         A E +T
Sbjct: 604 AEGGPPVAVTDDGDLDWNPVWSPDGRYLYFASDRGGSTNMWRVAIDERTGERRGAPEPVT 663

Query: 299 NTLFINISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEAS--YFDPVW 354
                     +S D   +V+   R     +++      G+     +     S     P  
Sbjct: 664 TPSAYAAHLRFSSDGKHMVYADIRSASNLQRIAFDPDAGAVVGAPTWVTGGSLDLNAPDV 723

Query: 355 SPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG 412
           SP G+ +A T      +  + VM+ DGS+ R L +D  N + P W+P G  + F   + G
Sbjct: 724 SPDGEWLAMTVTDEANREDLLVMRVDGSERRRLTDDVYNDRTPRWAPDGSRIAFYSDRSG 783

Query: 413 DTGSKLYSIDLNGRNETLI--NTPAYASDPQWVG 444
               +L+++D +G     +   T      P W  
Sbjct: 784 K--YELWAVDPHGNRLEQLTFTTGDSVYYPVWSP 815



 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 62/286 (21%), Positives = 113/286 (39%), Gaps = 12/286 (4%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN--IRYLTPSRDQILFEPRFSPNQQK 225
                 + R L+ +           + + +R G          +        RFS + + 
Sbjct: 621 NPVWSPDGRYLYFASDRGGSTNMWRVAIDERTGERRGAPEPVTTPSAYAAHLRFSSDGKH 680

Query: 226 VAYATYDDEDILRVYLMDTRID---RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           + YA       L+    D        AP  +      + AP  S +G+   ++V  +   
Sbjct: 681 MVYADIRSASNLQRIAFDPDAGAVVGAPTWVTGGSLDLNAPDVSPDGEWLAMTVTDEANR 740

Query: 283 -DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            D+  + +  +   RLT+ ++ + +  ++PD S+I F SDR GK +L+ +  +G+  +++
Sbjct: 741 EDLLVMRVDGSERRRLTDDVYNDRTPRWAPDGSRIAFYSDRSGKYELWAVDPHGNRLEQL 800

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLL-VEDSNLQAPTWS 398
           +     S + PVWSP G  +   + S   + I   +   +Q  ERL  VED+     +WS
Sbjct: 801 TFTTGDSVYYPVWSPDGSRVLVQQRSDGSYVIDAEQPWEAQTPERLADVEDTWFTGWSWS 860

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             G  L  +       G   Y+    G  E L  + A    P W+ 
Sbjct: 861 SDGDRLAGAVHIGDRHGLGTYTFS-TGAYEIL--SDAEMDTPLWLA 903



 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 86/249 (34%), Gaps = 19/249 (7%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
                   R      P   P+ + V +A  D  D   +Y        A     +      
Sbjct: 428 RHFTQLTYRGGQEVFPSLGPDARWVIFAGRDGGD-WDIYYQRIGGSNAFNLTADSAYDDT 486

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            P  S +G        ++    IY +++   +  R+ +        S+SPD   + + + 
Sbjct: 487 EPVLSPDGAHIAFRSTREGGG-IYVMEVTGESVRRVVDEGAN---PSWSPDGRSLAYATR 542

Query: 322 REGKEQ------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAI 373
                       L+ +      ++R++   +A    P WSP G  IA+      G +  I
Sbjct: 543 STLLPNSRSPGELWTIDLASGRRRRVA---DADATQPAWSPGGHRIAYWGLPEGGSQRDI 599

Query: 374 GVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +  +G     + +D +    P WSP GR L F+  + G T   ++ + ++ R      
Sbjct: 600 WTVSAEGGPPVAVTDDGDLDWNPVWSPDGRYLYFASDRGGST--NMWRVAIDERTGERRG 657

Query: 433 TPAYASDPQ 441
            P   + P 
Sbjct: 658 APEPVTTPS 666



 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 76/208 (36%), Gaps = 14/208 (6%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI- 303
            + R   ++       + P    + +  + + +     DIY   +  +    LT      
Sbjct: 425 EVPRHFTQLTYRGGQEVFPSLGPDARWVIFAGRDGGDWDIYYQRIGGSNAFNLTADSAYD 484

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +     SPD + I F S REG   +YVM+  G   +R+  +      +P WSP G  +A+
Sbjct: 485 DTEPVLSPDGAHIAFRSTREGG-GIYVMEVTGESVRRVVDEG----ANPSWSPDGRSLAY 539

Query: 364 TKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              S           +  +     + R  V D++   P WSP G  + +    +G +   
Sbjct: 540 ATRSTLLPNSRSPGELWTIDLASGRRRR-VADADATQPAWSPGGHRIAYWGLPEGGSQRD 598

Query: 418 LYSIDLNGRNETLINTPAY-ASDPQWVG 444
           ++++   G     +        +P W  
Sbjct: 599 IWTVSAEGGPPVAVTDDGDLDWNPVWSP 626



 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 101/274 (36%), Gaps = 33/274 (12%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   +      G+N   LT        EP  SP+   +A+ +  +     +Y+M+ 
Sbjct: 456 GRDGGDWDIYYQRIGGSNAFNLTADSAYDDTEPVLSPDGAHIAFRSTREGGG--IYVMEV 513

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLT 298
             +   + +    +    P +S +G+    + +     +      ++++DL S    R+ 
Sbjct: 514 TGESVRRVVDEGAN----PSWSPDGRSLAYATRSTLLPNSRSPGELWTIDLASGRRRRVA 569

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +        ++SP   +I +    EG  Q  ++ + + G     ++ D +  + +PVWSP
Sbjct: 570 DADA--TQPAWSPGGHRIAYWGLPEGGSQRDIWTVSAEGGPPVAVTDDGDLDW-NPVWSP 626

Query: 357 QGDLIAFTKFSGEKFAIGVMKKD-------GSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            G  + F    G    +  +  D       G+ E +    +      +S  G+ ++++  
Sbjct: 627 DGRYLYFASDRGGSTNMWRVAIDERTGERRGAPEPVTTPSAYAAHLRFSSDGKHMVYA-- 684

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            D  + S L  I  +       +  A    P WV
Sbjct: 685 -DIRSASNLQRIAFD------PDAGAVVGAPTWV 711



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 89/255 (34%), Gaps = 54/255 (21%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                      L  P  SP+ + +A    D+ +   + +M        +R+ +       
Sbjct: 707 APTWVTGGSLDLNAPDVSPDGEWLAMTVTDEANREDLLVMRVD-GSERRRLTDDVYNDRT 765

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESD 321
           PR++ +G R      +    ++++VD   N  E+LT T   ++    +SPD S+++ +  
Sbjct: 766 PRWAPDGSRIAFYSDRSGKYELWAVDPHGNRLEQLTFTTGDSVYYPVWSPDGSRVLVQQR 825

Query: 322 REGKEQLYVMQSN----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            +G    YV+ +         +R++  ++  +    WS  GD +A     G++  +G   
Sbjct: 826 SDGS---YVIDAEQPWEAQTPERLADVEDTWFTGWSWSSDGDRLAGAVHIGDRHGLGTYT 882

Query: 378 KDGSQERLLVEDSNLQAPTW---------------------------------------- 397
                  +L  D+ +  P W                                        
Sbjct: 883 FSTGAYEIL-SDAEMDTPLWLADDRRMVAVDRRDPSVLYLFDSETGERRVLYSIAPDRFG 941

Query: 398 ----SPSGRSLIFSR 408
               +P GR+L ++R
Sbjct: 942 RISLAPDGRTLYYAR 956



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 80/212 (37%), Gaps = 9/212 (4%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            ++DD+Y   T       SRI F S+       K  L  +D  G  +  LT +    ++ 
Sbjct: 755 RLTDDVYNDRTPRWAPDGSRIAFYSDR----SGKYELWAVDPHGNRLEQLTFTTGDSVYY 810

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALIS 275
           P +SP+  +V       +    +        + P+R+ +          +SS+G R   +
Sbjct: 811 PVWSPDGSRVL-VQQRSDGSYVIDAEQPWEAQTPERLADVEDTWFTGWSWSSDGDRLAGA 869

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           V   +   + +    + A E L++      +  +  D  ++V   DR     LY+  S  
Sbjct: 870 VHIGDRHGLGTYTFSTGAYEILSD--AEMDTPLWLADDRRMVAV-DRRDPSVLYLFDSET 926

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +++ +       +     +P G  + + + +
Sbjct: 927 GERRVLYSIAPDRFGRISLAPDGRTLYYARIT 958


>gi|302039356|ref|YP_003799678.1| putative protein TolB (fragment) [Candidatus Nitrospira defluvii]
 gi|300607420|emb|CBK43753.1| putative Protein TolB (fragment) [Candidatus Nitrospira defluvii]
          Length = 377

 Score =  142 bits (359), Expect = 9e-32,   Method: Composition-based stats.
 Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 48/267 (17%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL------------- 237
             + VMD     IR ++           F P  ++V Y++                    
Sbjct: 97  YQMYVMDLGSEKIRMVSTGSGTTTCG-YFFPGDRRVLYSSTHLRGPNCPPKPKRDGGAYR 155

Query: 238 ----RVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                  L   RID   P+R+ N          S NGK  + +  +D  +DIY++DL   
Sbjct: 156 WALDDYDLFSVRIDGLDPQRLTNTPGYDAEATVSPNGKSIVWTSMRDGDLDIYAMDLDGT 215

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDR--------------------EGKEQLYVMQ 332
              RLT  +  +  A +SPDS +IV+ +                       G+ ++++M 
Sbjct: 216 HPRRLTQEIGYDGGAFFSPDSKRIVYRAQHPSNQEELDQYKALLAQNLVEPGRLEIFIMN 275

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKDG-SQER 384
           ++GS++++++ +  AS F P + P G  + F      +       F + ++ +DG  QER
Sbjct: 276 ADGSNKQQVTNNG-ASNFSPFFHPDGHRVIFASNVETRNAAGRPEFHLYLVTEDGSGQER 334

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           L  +      P +SP G+ L++   + 
Sbjct: 335 LTFDGQFNSFPMFSPDGKMLVWVSDRH 361



 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 55/307 (17%), Positives = 106/307 (34%), Gaps = 67/307 (21%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----------------DILRVYLMDT 244
            NIR LT  R        FS    K+ + + ++                    ++Y+MD 
Sbjct: 47  TNIRQLTFGRQNAEAYFSFS--GNKLIFQSTNNWMKDTFAAAMHPSDIPLGCYQMYVMDL 104

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------------KDEAMDIYSVD---- 288
             ++  + +           F    +R L S              +D     +++D    
Sbjct: 105 GSEK-IRMVSTGSGTTTCGYFFPGDRRVLYSSTHLRGPNCPPKPKRDGGAYRWALDDYDL 163

Query: 289 ----LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
               +     +RLTNT   +  A+ SP+   IV+ S R+G   +Y M  +G+  +R++Q+
Sbjct: 164 FSVRIDGLDPQRLTNTPGYDAEATVSPNGKSIVWTSMRDGDLDIYAMDLDGTHPRRLTQE 223

Query: 345 KEASYFDPVWSPQGDLIAFTKFSG--------------------EKFAIGVMKKDGSQER 384
                    +SP    I +                          +  I +M  DGS ++
Sbjct: 224 -IGYDGGAFFSPDSKRIVYRAQHPSNQEELDQYKALLAQNLVEPGRLEIFIMNADGSNKQ 282

Query: 385 LLVEDS-NLQAPTWSPSGRSLIFSRKKD-----GDTGSKLYSIDLNGRNETLINTPA-YA 437
            +  +  +  +P + P G  +IF+   +     G     LY +  +G  +  +     + 
Sbjct: 283 QVTNNGASNFSPFFHPDGHRVIFASNVETRNAAGRPEFHLYLVTEDGSGQERLTFDGQFN 342

Query: 438 SDPQWVG 444
           S P +  
Sbjct: 343 SFPMFSP 349



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 77/252 (30%), Gaps = 60/252 (23%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKD-----------------EAMDIYSVDLQSNAT 294
           R   F        FS +G + +     +                     +Y +DL S   
Sbjct: 50  RQLTFGRQNAEAYFSFSGNKLIFQSTNNWMKDTFAAAMHPSDIPLGCYQMYVMDLGSEKI 109

Query: 295 ERLTNTLFINISASYSPDSSQIVFESD------------REGK--------EQLYVMQSN 334
             ++          + P   ++++ S             R+G           L+ ++ +
Sbjct: 110 RMVSTGSGTTTCGYFFPGDRRVLYSSTHLRGPNCPPKPKRDGGAYRWALDDYDLFSVRID 169

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQ 393
           G D +R++ +      +   SP G  I +T        I  M  DG+  R L ++     
Sbjct: 170 GLDPQRLT-NTPGYDAEATVSPNGKSIVWTSMRDGDLDIYAMDLDGTHPRRLTQEIGYDG 228

Query: 394 APTWSPSGRSLIFSRKKDGD------------------TGSKLYSIDLNGRNETLINTPA 435
              +SP  + +++  +   +                     +++ ++ +G N+  +    
Sbjct: 229 GAFFSPDSKRIVYRAQHPSNQEELDQYKALLAQNLVEPGRLEIFIMNADGSNKQQVTNNG 288

Query: 436 YASDPQWVGFMD 447
            ++      F  
Sbjct: 289 ASNF---SPFFH 297



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 49/161 (30%), Gaps = 24/161 (14%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F          +  +P +      + +L AQ LV          RL +     D  ++
Sbjct: 229 GAFFSPDSKRIVYRAQHPSNQEELDQYKALLAQNLV-------EPGRLEIFIMNADGSNK 281

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q+      +    +    H +              F S    V     +G  +  L ++
Sbjct: 282 QQVTNNGASNFSPFFHPDGHRV-------------IFASN---VETRNAAGRPEFHLYLV 325

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
             DG+    LT    Q    P FSP+ + + + +       
Sbjct: 326 TEDGSGQERLTFDG-QFNSFPMFSPDGKMLVWVSDRHAKEP 365


>gi|197104555|ref|YP_002129932.1| hypothetical protein PHZ_c1089 [Phenylobacterium zucineum HLK1]
 gi|196477975|gb|ACG77503.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
          Length = 1107

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 50/228 (21%), Positives = 90/228 (39%), Gaps = 27/228 (11%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             V    T        I       +    S +G+    ++  D    IY + +      R
Sbjct: 67  WDVNNPPTVGQVRQVPINVDEGTWMDLDVSPDGRTIAFALLGD----IYVMPISGGTPTR 122

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +   +   +   +SPD  +I F SDR G + ++VM ++GSD++++++++      P WSP
Sbjct: 123 IAEGMAWEVQPRFSPDGKRIAFTSDRGGGDNIWVMNADGSDKRQVTKEEFRLLNQPAWSP 182

Query: 357 QGDLIA-----FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLI 405
            G  IA      T  S     + +    G     LV+  N Q       P ++P G+S+ 
Sbjct: 183 DGRFIAAKKHFTTGRSLGTGEVWLYHVSGGGGVPLVKRPNEQHQKELGEPIFAPDGKSIY 242

Query: 406 FSRK--------KDGDTGSKLYSID----LNGRNETLINTPAYASDPQ 441
           F+R            D+ + L++I+      G   T +  P  +  P 
Sbjct: 243 FTRNITPGPIFEYAQDSNTDLFNIERYELATGETSTAVAGPGGSVRPT 290



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 103/256 (40%), Gaps = 32/256 (12%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   +      +    +   SP+ + +A+A   D     +Y+M       P RI    + 
Sbjct: 76  GQVRQVPINVDEGTWMDLDVSPDGRTIAFALLGD-----IYVMPI-SGGTPTRIAEGMAW 129

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV- 317
            + PRFS +GKR   +  +    +I+ ++   +   ++T   F  ++  ++SPD   I  
Sbjct: 130 EVQPRFSPDGKRIAFTSDRGGGDNIWVMNADGSDKRQVTKEEFRLLNQPAWSPDGRFIAA 189

Query: 318 ---FESDRE-GKEQLYVMQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKF--- 366
              F + R  G  ++++   +G       KR ++  +    +P+++P G  I FT+    
Sbjct: 190 KKHFTTGRSLGTGEVWLYHVSGGGGVPLVKRPNEQHQKELGEPIFAPDGKSIYFTRNITP 249

Query: 367 ----------SGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                     + + F I   +    +    +        PT SP G+ + F R++   T 
Sbjct: 250 GPIFEYAQDSNTDLFNIERYELATGETSTAVAGPGGSVRPTPSPDGKKIAFIRRE--RTQ 307

Query: 416 SKLYSIDLNGRNETLI 431
           S+LY  DL    E  +
Sbjct: 308 SRLYVKDLASGVERKV 323



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 57/326 (17%), Positives = 111/326 (34%), Gaps = 72/326 (22%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATY 231
           RI F S+          + VM+ DG++ R +T    ++L +P +SP+ + +A    + T 
Sbjct: 141 RIAFTSDRGGGDN----IWVMNADGSDKRQVTKEEFRLLNQPAWSPDGRFIAAKKHFTTG 196

Query: 232 DDEDILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRALISV----------- 276
                  V+L           +       +  +  P F+ +GK    +            
Sbjct: 197 RSLGTGEVWLYHVSGGGGVPLVKRPNEQHQKELGEPIFAPDGKSIYFTRNITPGPIFEYA 256

Query: 277 --QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                +  +I   +L +  T         ++  + SPD  +I F      + +LYV    
Sbjct: 257 QDSNTDLFNIERYELATGETSTAVAGPGGSVRPTPSPDGKKIAFIRRERTQSRLYVKDLA 316

Query: 335 GSDQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              ++++          +      Y +  W+P    + F  ++G K  I  +  DG+  R
Sbjct: 317 SGVERKVYDDLDRDMQETWAVVGLYPNLAWTPDSKTLVF--WAGGK--IRRVDADGANAR 372

Query: 385 LLVEDSNL-----QAP-------------------TWSPSGRSLIFSRKKDGDTGSKLYS 420
           ++    N      +AP                     SP GR +++      ++  KLY 
Sbjct: 373 VIPFRVNDTRAVIEAPHPKVQVAPDRFATKMTRYAAVSPDGRQVVY------ESLGKLYV 426

Query: 421 IDLNGRNETLIN---TPAYASDPQWV 443
             + G     +      A+   P W 
Sbjct: 427 KPMAGGAARRLTRGDDGAFELFPAWS 452



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/336 (14%), Positives = 109/336 (32%), Gaps = 63/336 (18%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGI--IKNSLCVMDRDGAN----IRYLTPSRDQILFE 216
           ++ +       + R +   +   +G       + +    G      ++       + L E
Sbjct: 172 FRLLNQPAWSPDGRFIAAKKHFTTGRSLGTGEVWLYHVSGGGGVPLVKRPNEQHQKELGE 231

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRID-----------RAPKRIGNFRSMILAPRF 265
           P F+P+ + + +        +  Y  D+  D                        + P  
Sbjct: 232 PIFAPDGKSIYFTRNITPGPIFEYAQDSNTDLFNIERYELATGETSTAVAGPGGSVRPTP 291

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----------SASYSPDSS 314
           S +GK+     ++     +Y  DL S    ++ + L  ++           + +++PDS 
Sbjct: 292 SPDGKKIAFIRRERTQSRLYVKDLASGVERKVYDDLDRDMQETWAVVGLYPNLAWTPDSK 351

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY----------------------FDP 352
            +VF +      ++  + ++G++ + I      +                          
Sbjct: 352 TLVFWA----GGKIRRVDADGANARVIPFRVNDTRAVIEAPHPKVQVAPDRFATKMTRYA 407

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQ-APTWSPSGRSLIFSRK 409
             SP G  + +         + V    G   R L   +D   +  P WS  GR++ F   
Sbjct: 408 AVSPDGRQVVYESLG----KLYVKPMAGGAARRLTRGDDGAFELFPAWSRDGRTIAFVSW 463

Query: 410 KDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
            D   G ++ ++  +G     + N P + + PQ+  
Sbjct: 464 TDAGLG-RIKTVAASGGTARDVTNQPGHYARPQFSP 498



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 88/244 (36%), Gaps = 42/244 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-------------- 263
            ++P+ + + +  +    I RV          P R+ + R++I AP              
Sbjct: 345 AWTPDSKTLVF--WAGGKIRRVDADGANARVIPFRVNDTRAVIEAPHPKVQVAPDRFATK 402

Query: 264 -----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQI 316
                  S +G++ +          +Y   +   A  RLT  +     +  ++S D   I
Sbjct: 403 MTRYAAVSPDGRQVVYES----LGKLYVKPMAGGAARRLTRGDDGAFELFPAWSRDGRTI 458

Query: 317 VFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------ 369
            F S  + G  ++  + ++G   + ++ ++   Y  P +SP G  I F K  G       
Sbjct: 459 AFVSWTDAGLGRIKTVAASGGTARDVT-NQPGHYARPQFSPDGRTIVFEKGEGGFLTARA 517

Query: 370 ---KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +  +   G     +  D  + AP +   G  +     + G    +L S DLNG 
Sbjct: 518 WSENPGVYRVPASGGTPVRIARD--MGAPQFGADGERVFMVASEKGKQ--QLVSTDLNGE 573

Query: 427 NETL 430
            + +
Sbjct: 574 AKRV 577



 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 94/289 (32%), Gaps = 46/289 (15%)

Query: 193 LCVMDRDGANIRYL----------------------TPSRDQILFEPRFSPNQQKVAYAT 230
           +  +D DGAN R +                           ++      SP+ ++V Y +
Sbjct: 361 IRRVDADGANARVIPFRVNDTRAVIEAPHPKVQVAPDRFATKMTRYAAVSPDGRQVVYES 420

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDL 289
                 L V  M     R   R G+  +  L P +S +G+        D     I +V  
Sbjct: 421 LGK---LYVKPMAGGAARRLTR-GDDGAFELFPAWSRDGRTIAFVSWTDAGLGRIKTVAA 476

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREG---------KEQLYVMQSNGSDQKR 340
                  +TN         +SPD   IVFE    G            +Y + ++G    R
Sbjct: 477 SGGTARDVTNQPGHYARPQFSPDGRTIVFEKGEGGFLTARAWSENPGVYRVPASGGTPVR 536

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           I++D       P +   G+ +        K  +     +G  +R+  +   +   + SP 
Sbjct: 537 IARD----MGAPQFGADGERVFMVASEKGKQQLVSTDLNGEAKRVHAQGELVTDYSVSPD 592

Query: 401 GRSLIFSRKKDGD-----TGSKLYSIDLNGRNETLI-NTPAYASDPQWV 443
           G    F +  +        G +  ++DL G    +   +   A+   W 
Sbjct: 593 GALFAFRQNYEAHVMPLMPGGQEVAVDLKGGPMPVTRVSHGGATWIHWS 641



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 85/308 (27%), Gaps = 81/308 (26%)

Query: 142 KKFFSSPASWRKIAHTISD------DIYQSITGEKGDFNSRILFVSESVVSGII-----K 190
           ++  +  A+ R I   ++D        +  +      F +++   +     G        
Sbjct: 362 RRVDADGANARVIPFRVNDTRAVIEAPHPKVQVAPDRFATKMTRYAAVSPDGRQVVYESL 421

Query: 191 NSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             L V    G   R LT   D      P +S + + +A+ ++ D  + R+  +       
Sbjct: 422 GKLYVKPMAGGAARRLTRGDDGAFELFPAWSRDGRTIAFVSWTDAGLGRIKTVA-ASGGT 480

Query: 250 PKRIGNFRSMILAPRFSSNGKRALI---------SVQKDEAMDIYSVDLQSNATERLTNT 300
            + + N       P+FS +G+  +          +    E   +Y V        R+   
Sbjct: 481 ARDVTNQPGHYARPQFSPDGRTIVFEKGEGGFLTARAWSENPGVYRVPASGGTPVRIARD 540

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNG------------------------- 335
           +    +  +  D  ++   +  +GK+QL     NG                         
Sbjct: 541 MG---APQFGADGERVFMVASEKGKQQLVSTDLNGEAKRVHAQGELVTDYSVSPDGALFA 597

Query: 336 ------------------------SDQKRISQDKEASYFDPVWSPQGDLI-------AFT 364
                                        +++          WS  G  +        +T
Sbjct: 598 FRQNYEAHVMPLMPGGQEVAVDLKGGPMPVTRVSHGGATWIHWSDGGRRLHWSAGPTVYT 657

Query: 365 KFSGEKFA 372
             SG  F 
Sbjct: 658 AESGSFFR 665


>gi|30248906|ref|NP_840976.1| periplasmic component of the Tol biopolymer transport system
           [Nitrosomonas europaea ATCC 19718]
 gi|30138523|emb|CAD84813.1| Periplasmic component of the Tol biopolymer transport system
           [Nitrosomonas europaea ATCC 19718]
          Length = 369

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 52/200 (26%), Positives = 90/200 (45%), Gaps = 25/200 (12%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ- 327
           G+R   +   DE  DIY  D        LT+T   +  AS+SPD   I F S+R    + 
Sbjct: 135 GQRRSYAWDYDEFYDIYETDFAGGNIRNLTHTKGYDAEASWSPDGRLIAFASNRRAYSEP 194

Query: 328 ------------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-- 367
                             +Y+M ++GS+ KR++    +    P +SP G  I + +FS  
Sbjct: 195 LSEAETVLFSNDPSSMIDIYIMDADGSNVKRLTH-TNSYDGGPFFSPDGKRIVWRRFSEN 253

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           G++  I  M  DGS ++ +   + +  AP + PS + +IF+    G    +LY +D++G+
Sbjct: 254 GQEAEIFTMNTDGSDQKQITRLNKMSWAPFYHPSNQYIIFATNVHGHRNFELYIVDIDGK 313

Query: 427 NE--TLINTPAYASDPQWVG 444
            E   + +   +   P +  
Sbjct: 314 KEPVRVTDEEGFDGLPVFTP 333



 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 98/223 (43%), Gaps = 28/223 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--- 278
           + Q+ +YA +D ++   +Y  D       + + + +       +S +G+    +  +   
Sbjct: 134 SGQRRSYA-WDYDEFYDIYETD-FAGGNIRNLTHTKGYDAEASWSPDGRLIAFASNRRAY 191

Query: 279 ----------------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--S 320
                              +DIY +D   +  +RLT+T   +    +SPD  +IV+   S
Sbjct: 192 SEPLSEAETVLFSNDPSSMIDIYIMDADGSNVKRLTHTNSYDGGPFFSPDGKRIVWRRFS 251

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKK 378
           +   + +++ M ++GSDQK+I++  + S+  P + P    I F         F + ++  
Sbjct: 252 ENGQEAEIFTMNTDGSDQKQITRLNKMSW-APFYHPSNQYIIFATNVHGHRNFELYIVDI 310

Query: 379 DGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           DG +E  R+  E+     P ++P G+ + ++  +  D   +L+
Sbjct: 311 DGKKEPVRVTDEEGFDGLPVFTPDGQYITWTSDRTPDHKGRLF 353



 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 102/243 (41%), Gaps = 33/243 (13%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK---------NSLCVMDRDGANIRYL 206
           H I + +  S T E  +  +++    E   SG  +           +   D  G NIR L
Sbjct: 104 HPIQEKVLFSSTHEDPEAKAKMTTEIEQRKSGQRRSYAWDYDEFYDIYETDFAGGNIRNL 163

Query: 207 TPSRDQILFEPRFSPNQQKVAYATY------------------DDEDILRVYLMDTRIDR 248
           T ++     E  +SP+ + +A+A+                   D   ++ +Y+MD     
Sbjct: 164 THTK-GYDAEASWSPDGRLIAFASNRRAYSEPLSEAETVLFSNDPSSMIDIYIMDAD-GS 221

Query: 249 APKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             KR+ +  S    P FS +GKR +     +  +  +I++++   +  +++T    ++ +
Sbjct: 222 NVKRLTHTNSYDGGPFFSPDGKRIVWRRFSENGQEAEIFTMNTDGSDQKQITRLNKMSWA 281

Query: 307 ASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             Y P +  I+F ++  G    +LY++  +G  +     D+E     PV++P G  I +T
Sbjct: 282 PFYHPSNQYIIFATNVHGHRNFELYIVDIDGKKEPVRVTDEEGFDGLPVFTPDGQYITWT 341

Query: 365 KFS 367
              
Sbjct: 342 SDR 344



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 73/183 (39%), Gaps = 10/183 (5%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
           + + ASW      I+    +    E       +LF             + +MD DG+N++
Sbjct: 169 YDAEASWSPDGRLIAFASNRRAYSEPLSEAETVLF----SNDPSSMIDIYIMDADGSNVK 224

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            LT +       P FSP+ +++ +  + ++     ++ M+T      K+I     M  AP
Sbjct: 225 RLTHTNS-YDGGPFFSPDGKRIVWRRFSENGQEAEIFTMNTD-GSDQKQITRLNKMSWAP 282

Query: 264 RFSSNGKRALISVQKDE--AMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFES 320
            +  + +  + +         ++Y VD+       R+T+    +    ++PD   I + S
Sbjct: 283 FYHPSNQYIIFATNVHGHRNFELYIVDIDGKKEPVRVTDEEGFDGLPVFTPDGQYITWTS 342

Query: 321 DRE 323
           DR 
Sbjct: 343 DRT 345



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 21/58 (36%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
             +  + V G     L ++D DG          +     P F+P+ Q + + +    D
Sbjct: 290 YIIFATNVHGHRNFELYIVDIDGKKEPVRVTDEEGFDGLPVFTPDGQYITWTSDRTPD 347


>gi|86133597|ref|ZP_01052179.1| WD40-like repeat/amidohydrolase domain protein [Polaribacter sp.
           MED152]
 gi|85820460|gb|EAQ41607.1| WD40-like repeat/amidohydrolase domain protein [Polaribacter sp.
           MED152]
          Length = 1127

 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 96/207 (46%), Gaps = 21/207 (10%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                 L+   S +G+  + S+  D    +Y++        R+T+ L ++   +YSPD  
Sbjct: 49  TTEGTWLSLDISPDGETIIFSMLGD----LYTIPFSGGKATRITDGLALDTKPNYSPDGK 104

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            I F SDR G + ++++     + +++++DK  +     WSP G+ I           + 
Sbjct: 105 SIAFASDRSGNDNVWILNLETKETRQVTKDKRGAVESVAWSPDGEYIV-AAKGKRNLKLH 163

Query: 375 VMKKD-GSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDG-DTGSKL--YSIDL----N 424
           +  KD GS  +L+ E ++L+   P +SP  + + +S +  G +  ++L  Y I       
Sbjct: 164 LYHKDAGSGTQLIKEPASLKTVEPVFSPDNKYIYYSSRTGGWNYNAQLPQYQISRYDLET 223

Query: 425 GRNETLIN------TPAYASDPQWVGF 445
           G++  + +      TP  +SD +++ +
Sbjct: 224 GKSTRVTSRYGSAFTPTLSSDGKYMVY 250



 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 84/211 (39%), Gaps = 18/211 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+ + + ++     D+  +            RI +  ++   P +S +GK    +  +
Sbjct: 59  ISPDGETIIFSML--GDLYTIPF----SGGKATRITDGLALDTKPNYSPDGKSIAFASDR 112

Query: 279 DEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGS 336
               +++ ++L++  T ++T        S ++SPD   IV     R  K  LY   + GS
Sbjct: 113 SGNDNVWILNLETKETRQVTKDKRGAVESVAWSPDGEYIVAAKGKRNLKLHLYHKDA-GS 171

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------KFAIGVMKKDGSQERLLVE 388
             + I +       +PV+SP    I ++  +G         ++ I     +  +   +  
Sbjct: 172 GTQLIKEPASLKTVEPVFSPDNKYIYYSSRTGGWNYNAQLPQYQISRYDLETGKSTRVTS 231

Query: 389 D-SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              +   PT S  G+ +++  + +  TG  L
Sbjct: 232 RYGSAFTPTLSSDGKYMVYGSRYEEKTGLVL 262



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 98/290 (33%), Gaps = 32/290 (11%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + S  +      +   +   L  +   G     +T     +  +P +SP+ + +A+A
Sbjct: 51  EGTWLSLDISPDGETIIFSMLGDLYTIPFSGGKATRITDGL-ALDTKPNYSPDGKSIAFA 109

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D      V++++       +   + R  + +  +S +G+  + + +    + ++    
Sbjct: 110 S-DRSGNDNVWILNLETKETRQVTKDKRGAVESVAWSPDGEYIV-AAKGKRNLKLHLYHK 167

Query: 290 QSNATERLTNTLFI--NISASYSPDSSQIVFESDREGKE--------QLYVMQSNGSDQK 339
            + +  +L         +   +SPD+  I + S   G          Q+           
Sbjct: 168 DAGSGTQLIKEPASLKTVEPVFSPDNKYIYYSSRTGGWNYNAQLPQYQISRYDLETGKST 227

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---------- 389
           R++  +  S F P  S  G  + +     EK  + +       E  L             
Sbjct: 228 RVTS-RYGSAFTPTLSSDGKYMVYGSRYEEKTGLVLRDLISGDENWLAYPVQRDEQESVA 286

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               L A  ++P+ + ++         G K+Y I ++G     I      
Sbjct: 287 SLGVLPAMVFTPNNKEVL------ASYGGKIYRIPISGEKAIEIPFEVDV 330



 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 59/296 (19%), Positives = 104/296 (35%), Gaps = 44/296 (14%)

Query: 186 SGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            G     L +  +D G+  + +         EP FSP+ + + Y++          L   
Sbjct: 155 KGKRNLKLHLYHKDAGSGTQLIKEPASLKTVEPVFSPDNKYIYYSSRTGGWNYNAQLPQY 214

Query: 245 RIDRA------PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +I R         R+ +       P  SS+GK  +   + +E   +   DL S     L 
Sbjct: 215 QISRYDLETGKSTRVTSRYGSAFTPTLSSDGKYMVYGSRYEEKTGLVLRDLISGDENWLA 274

Query: 299 NTLFINISASYSPDS--SQIVFESDR-----EGKEQLYVMQSNGSDQKRISQDKEASY-- 349
             +  +   S +       +VF  +          ++Y +  +G     I  + +     
Sbjct: 275 YPVQRDEQESVASLGVLPAMVFTPNNKEVLASYGGKIYRIPISGEKAIEIPFEVDVDLAI 334

Query: 350 ---------------------FDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLV 387
                                  P  SP G  I F   +     + +M+  DG  +RL  
Sbjct: 335 GPKLEFKYPISDNPEMFANQIRSPKTSPDGKHIVFNALN----KLYIMQLPDGKPKRLTK 390

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQW 442
            D N   P WSP+G+ ++++   + D G  LY ++   G+   L NT A  + P W
Sbjct: 391 MDVNEMQPNWSPNGKEIVYTTWSEKDGG-HLYKVNAKGGKPIKLTNTSALYNTPVW 445



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 110/311 (35%), Gaps = 55/311 (17%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I F S+   +      + +++ +    R +T  +   +    +SP+ + +       + 
Sbjct: 105 SIAFASDRSGNDN----VWILNLETKETRQVTKDKRGAVESVAWSPDGEYI--VAAKGKR 158

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEA--------MDIYS 286
            L+++L         + I    S+  + P FS + K    S +              I  
Sbjct: 159 NLKLHLYHKDAGSGTQLIKEPASLKTVEPVFSPDNKYIYYSSRTGGWNYNAQLPQYQISR 218

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            DL++  + R+T+      + + S D   +V+ S  E K  L +      D+  ++   +
Sbjct: 219 YDLETGKSTRVTSRYGSAFTPTLSSDGKYMVYGSRYEEKTGLVLRDLISGDENWLAYPVQ 278

Query: 347 ASYFDPVWS----------PQGDLIAFTKFSGEKFAIGV-----------MKKDGS---- 381
               + V S          P    +    + G+ + I +           +  D +    
Sbjct: 279 RDEQESVASLGVLPAMVFTPNNKEVL-ASYGGKIYRIPISGEKAIEIPFEVDVDLAIGPK 337

Query: 382 -QERLLVEDS------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT 433
            + +  + D+       +++P  SP G+ ++F      +  +KLY + L +G+ + L   
Sbjct: 338 LEFKYPISDNPEMFANQIRSPKTSPDGKHIVF------NALNKLYIMQLPDGKPKRLTKM 391

Query: 434 PAYASDPQWVG 444
                 P W  
Sbjct: 392 DVNEMQPNWSP 402



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 63/172 (36%), Gaps = 11/172 (6%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                     + L+S        T    +S   SPD   I+F         LY +  +G 
Sbjct: 27  SLSGQEKFKELPLESGRKINFKTTEGTWLSLDISPDGETIIFSM----LGDLYTIPFSGG 82

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
              RI+ D  A    P +SP G  IAF         + ++  +  + R + +D    +++
Sbjct: 83  KATRIT-DGLALDTKPNYSPDGKSIAFASDRSGNDNVWILNLETKETRQVTKDKRGAVES 141

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS--DPQWVG 444
             WSP G  ++ + K   +    LY  D  G    LI  PA     +P +  
Sbjct: 142 VAWSPDGEYIV-AAKGKRNLKLHLYHKDA-GSGTQLIKEPASLKTVEPVFSP 191



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 26/186 (13%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P+ SP+ + + +   +     ++Y+M    D  PKR+       + P +S NGK  + + 
Sbjct: 358 PKTSPDGKHIVFNALN-----KLYIMQL-PDGKPKRLTKMDVNEMQPNWSPNGKEIVYTT 411

Query: 277 -QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------------- 322
             + +   +Y V+ +     +LTNT  +  +  +   +++IVF                 
Sbjct: 412 WSEKDGGHLYKVNAKGGKPIKLTNTSALYNTPVWDAKTNRIVFTKGSAQNFKNAYTRGAF 471

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G E L  + S+G +   I++         V S     I  +  SG    +  ++ DG+ 
Sbjct: 472 SGSEDLAWISSDGGEVNFITKTNGRRNPHFVKSDD--RIYLSNGSG----LSSIRWDGTD 525

Query: 383 ERLLVE 388
           E+ +V 
Sbjct: 526 EKKIVS 531



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 117/348 (33%), Gaps = 81/348 (23%)

Query: 115 RVIKEGKDRLRVEFRL-WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           R+   G+  + + F +  D+    ++   +F    +   ++    ++ I    T   G  
Sbjct: 313 RIPISGEKAIEIPFEVDVDLAIGPKL---EFKYPISDNPEM---FANQIRSPKTSPDG-- 364

Query: 174 NSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
              I+F           N L +M   DG   R      D    +P +SPN +++ Y T+ 
Sbjct: 365 -KHIVF--------NALNKLYIMQLPDGKPKR--LTKMDVNEMQPNWSPNGKEIVYTTWS 413

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-------------VQKD 279
           ++D   +Y ++ +    P ++ N  ++   P + +   R + +                 
Sbjct: 414 EKDGGHLYKVNAK-GGKPIKLTNTSALYNTPVWDAKTNRIVFTKGSAQNFKNAYTRGAFS 472

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + D+  +         +T T     +  +   S   ++ S+  G   +     +G+D+K
Sbjct: 473 GSEDLAWISSDGGEVNFITKTNGR-RNPHFV-KSDDRIYLSNGSGLSSIRW---DGTDEK 527

Query: 340 RI-------SQDKEA------------------SYFDPV---WSPQGDLIAFTKFSGEKF 371
           +I       +                       +   PV    +P+GD  A    + + +
Sbjct: 528 KIVSIRGIVTFGNSHKDNVDFGHVDDDVSEERNNASRPVEVYMAPEGDK-AMALITNDVY 586

Query: 372 AIGV------------MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            + V            +    S     +     + P+WS  G S+ ++
Sbjct: 587 VVTVPKYGQTPTISVSIPSSASFPSWKLTTFGGEFPSWSKDGNSVHWA 634


>gi|283781895|ref|YP_003372650.1| WD40 domain-containing protein beta propeller [Pirellula staleyi
           DSM 6068]
 gi|283440348|gb|ADB18790.1| WD40 domain protein beta Propeller [Pirellula staleyi DSM 6068]
          Length = 360

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/274 (19%), Positives = 90/274 (32%), Gaps = 49/274 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ +++ Y     +         +     P +I   R       FS +G + L +   
Sbjct: 59  FSPDGKQIVYQAQPLDYPFYQIFRQSLDGGRPLQISTGRGRTTCSYFSIDGTKILFASSH 118

Query: 279 --------------------------------DEAMDIYSVDLQSNATERLTNTLFINIS 306
                                           D   +++  DL     ++LTN    +  
Sbjct: 119 LDPAIDATEAAERKQQEEDKKSGVRRRYKWDFDPYTEMFEADLDGKILKQLTNEKGYDAE 178

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +YS D   I F SDR+G   LYVM S+G+  ++++ +       P  SP G  + F   
Sbjct: 179 GAYSKDGKLIAFCSDRDGDADLYVMNSDGTGVRQLT-NAPGYDGGPFISPDGKWVVFRSD 237

Query: 367 SGEK--FAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFS----RKKDGDTGSKLY 419
             EK    + V+  DG  E  L +       P W PS   +I+S              L+
Sbjct: 238 RKEKDMLQLFVIGIDGKNETQLTDTNGVNWGPYWHPSEPIIIWSGADHSDPTARPNYDLW 297

Query: 420 SIDLN---------GRNETLINTPAYASDPQWVG 444
           +             G  + + +       P +  
Sbjct: 298 AARYEIASDGKFKLGTTQRVTDFAGADVLPVFSP 331



 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 108/301 (35%), Gaps = 50/301 (16%)

Query: 170 KGDFN-SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           +G F+      V ++         +     DG     ++  R +      FS +  K+ +
Sbjct: 56  EGYFSPDGKQIVYQAQPLDYPFYQIFRQSLDGGRPLQISTGRGRTTCS-YFSIDGTKILF 114

Query: 229 ATYD--------------------DEDILRVYLMD----------TRIDRAPKRIGNFRS 258
           A+                         + R Y  D              +  K++ N + 
Sbjct: 115 ASSHLDPAIDATEAAERKQQEEDKKSGVRRRYKWDFDPYTEMFEADLDGKILKQLTNEKG 174

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                 +S +GK       +D   D+Y ++       +LTN    +     SPD   +VF
Sbjct: 175 YDAEGAYSKDGKLIAFCSDRDGDADLYVMNSDGTGVRQLTNAPGYDGGPFISPDGKWVVF 234

Query: 319 ESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------K 370
            SDR+ K+  QL+V+  +G ++ +++ D     + P W P   +I ++            
Sbjct: 235 RSDRKEKDMLQLFVIGIDGKNETQLT-DTNGVNWGPYWHPSEPIIIWSGADHSDPTARPN 293

Query: 371 FAIGVMKKD---------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +   + +         G+ +R+         P +SP G+ L+++  +  D  S+L+  
Sbjct: 294 YDLWAARYEIASDGKFKLGTTQRVTDFAGADVLPVFSPDGKKLMWTSTRSDDHSSQLFLA 353

Query: 422 D 422
           D
Sbjct: 354 D 354



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 85/239 (35%), Gaps = 39/239 (16%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM--DIYSVDLQSNATERLTN 299
           ++ +     K++ +         FS +GK+ +   Q  +     I+   L      +++ 
Sbjct: 36  IEAKTLGNIKQLTSGFVKAGEGYFSPDGKQIVYQAQPLDYPFYQIFRQSLDGGRPLQIST 95

Query: 300 TLFINISASYSPDSSQIVFES--------------------------------DREGKEQ 327
                  + +S D ++I+F S                                D +   +
Sbjct: 96  GRGRTTCSYFSIDGTKILFASSHLDPAIDATEAAERKQQEEDKKSGVRRRYKWDFDPYTE 155

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           ++    +G   K+++ +K     +  +S  G LIAF         + VM  DG+  R L 
Sbjct: 156 MFEADLDGKILKQLTNEK-GYDAEGAYSKDGKLIAFCSDRDGDADLYVMNSDGTGVRQLT 214

Query: 388 E-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
                   P  SP G+ ++F   +      +L+ I ++G+NET +      +   W  +
Sbjct: 215 NAPGYDGGPFISPDGKWVVFRSDRKEKDMLQLFVIGIDGKNETQLTDTNGVN---WGPY 270


>gi|168702262|ref|ZP_02734539.1| probable TolB protein [Gemmata obscuriglobus UQM 2246]
          Length = 342

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 121/304 (39%), Gaps = 45/304 (14%)

Query: 165 SITGEKGDFN---SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            +   +G F+   +R++F +E   +G     + +MD        ++P   +      F P
Sbjct: 37  YVRAGEGYFSPDGTRVIFQAEEKDTGNPFYQIFIMDLRTGKATRISPGVGRTTCG-YFHP 95

Query: 222 NQQKVAY-------------------------------ATYDDEDILRVYLMDTRIDRAP 250
           + ++V +                                ++D +  +++Y          
Sbjct: 96  DGKRVLFASSHSDPDAKKHQEAEVKQREEDKKKGVRRRYSWDFDPHMKIYEAGLDGTGLK 155

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASY 309
               + +       +S++GK+ + S      + +++++      +R+T+     N    +
Sbjct: 156 CLTPDAKVYTAEGSYSADGKKIVYSAGNAGNVQLFTMNADGTNVKRITDVANCYNGGPFF 215

Query: 310 SPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SPD +++VF +DR+ K+  QLYV+ ++G+ +K ++ D +  Y+ P W      I +T   
Sbjct: 216 SPDGTRVVFRADRKEKDRLQLYVINADGTGEKALTSDDKWVYWAPYWYKDNRHIIYTGAD 275

Query: 368 GEK------FAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                    + +  M    G + R+         P ++P G  ++++  ++G   ++LY 
Sbjct: 276 HSNPIAPPNYDLHWMDTETGKKTRITFAPGQDVLPVFNPDGTKVMWTSSREGGRAAQLYI 335

Query: 421 IDLN 424
            D  
Sbjct: 336 ADFT 339



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 65/212 (30%), Gaps = 43/212 (20%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKE--Q 327
              +   D      +         +LT          +SPD ++++F+++    G    Q
Sbjct: 8   LAFAPAADPEDWKGAEAAYLKNIRQLTTDYVRAGEGYFSPDGTRVIFQAEEKDTGNPFYQ 67

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------------------ 369
           +++M        RIS           + P G  + F     +                  
Sbjct: 68  IFIMDLRTGKATRISP-GVGRTTCGYFHPDGKRVLFASSHSDPDAKKHQEAEVKQREEDK 126

Query: 370 --------------KFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGD 413
                            I     DG+  + L  D+ +     ++S  G+ +++S    G 
Sbjct: 127 KKGVRRRYSWDFDPHMKIYEAGLDGTGLKCLTPDAKVYTAEGSYSADGKKIVYSAGNAG- 185

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
              +L++++ +G N   I   A   +     F
Sbjct: 186 -NVQLFTMNADGTNVKRITDVANCYNG--GPF 214


>gi|218780129|ref|YP_002431447.1| hypothetical protein Dalk_2286 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761513|gb|ACL03979.1| WD40 domain protein beta Propeller [Desulfatibacillum alkenivorans
           AK-01]
          Length = 310

 Score =  142 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 11/196 (5%)

Query: 212 QILFEPRFSPNQQKVAYATYD--DEDILRVYLMDTRID--RAPKRIGNFRSMILAPRFSS 267
            I  +P ++P   ++A+  Y     D   ++ +    D  R P++I  F  M+  P +S 
Sbjct: 114 GIYAQPTWAPAGFELAFVEYTAVPADAAEIFSIKKEGDIFRLPEKITKFPPMMTFPSYSP 173

Query: 268 NGKRALISVQKDEAM-----DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           +GK    +  K + +     +I  +DL++ +  +LT+    +    +SPD S++ + S+ 
Sbjct: 174 DGKLMACASFKRDPVLGVIEEIIVIDLKTGSQSQLTHDGADSFFPVWSPDGSKLAYTSNL 233

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           EG   ++ +     ++ R+++       +P WSP G  IAF         I  +   G+ 
Sbjct: 234 EGNFDIWAVSYPKGEKTRLTRSPSY-DGEPSWSPDGSRIAFISSRSGHREIWTIDAGGAD 292

Query: 383 ERLLVE-DSNLQAPTW 397
            R + E  S    P W
Sbjct: 293 SRQVTELKSTCSHPCW 308



 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 63/286 (22%), Positives = 115/286 (40%), Gaps = 26/286 (9%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G     I+F +    +   + +L V++ +   +  LT +  Q    P  SP  + +AY +
Sbjct: 37  GVKTGDIVFAA----NAQDQWNLWVIEPETKYLSQLTRTT-QTERFPAVSPGGKHIAYVS 91

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---SVQKDEAMDIYSV 287
                  ++ +MD+    A   +     +   P ++  G        +    +A +I+S+
Sbjct: 92  ----GRKQIRIMDSLTGEADT-VNLPLGIYAQPTWAPAGFELAFVEYTAVPADAAEIFSI 146

Query: 288 DLQS---NATERLTNTLFINISASYSPDSSQIVFESDREGK-----EQLYVMQSNGSDQK 339
             +       E++T    +    SYSPD   +   S +        E++ V+      Q 
Sbjct: 147 KKEGDIFRLPEKITKFPPMMTFPSYSPDGKLMACASFKRDPVLGVIEEIIVIDLKTGSQS 206

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWS 398
           +++ D  A  F PVWSP G  +A+T      F I  +    G + RL    S    P+WS
Sbjct: 207 QLTHDG-ADSFFPVWSPDGSKLAYTSNLEGNFDIWAVSYPKGEKTRLTRSPSYDGEPSWS 265

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWV 443
           P G  + F   + G    ++++ID  G +   +    +  S P WV
Sbjct: 266 PDGSRIAFISSRSGHR--EIWTIDAGGADSRQVTELKSTCSHPCWV 309



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 86/232 (37%), Gaps = 21/232 (9%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           + +A  + +D   +++++    +   ++         P  S  GK             I 
Sbjct: 43  IVFAA-NAQDQWNLWVIEPET-KYLSQLTRTTQTERFPAVSPGGKHIAYVS---GRKQIR 97

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQLYVMQSNGSD---QK 339
            +D  +   + +   L I    +++P   ++ F    +      +++ ++  G      +
Sbjct: 98  IMDSLTGEADTVNLPLGIYAQPTWAPAGFELAFVEYTAVPADAAEIFSIKKEGDIFRLPE 157

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVMKKDGSQERLLVEDSNLQA 394
           +I++      F P +SP G L+A   F  +        I V+      +  L  D     
Sbjct: 158 KITKFPPMMTF-PSYSPDGKLMACASFKRDPVLGVIEEIIVIDLKTGSQSQLTHDGADSF 216

Query: 395 -PTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
            P WSP G  L ++   +G+    ++++    G    L  +P+Y  +P W  
Sbjct: 217 FPVWSPDGSKLAYTSNLEGNF--DIWAVSYPKGEKTRLTRSPSYDGEPSWSP 266


>gi|125546375|gb|EAY92514.1| hypothetical protein OsI_14253 [Oryza sativa Indica Group]
          Length = 682

 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 75/391 (19%), Positives = 143/391 (36%), Gaps = 62/391 (15%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
            P     F    S GA  LV     + G D   +E  + DV D  +     +F       
Sbjct: 276 TPPGFHAFTPAASPGAPGLVAVATRRAGSDYRHIE--VIDVSDDGK---NAYFEVTRPVA 330

Query: 153 KIAHTISDDIYQ-----SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
              H  +  I            +G  N     + E++ S    ++  +   DG+      
Sbjct: 331 PRVHHFNPFISPDGARVGYHRCRGRGNGDSPLLLENIKSPGSPDTFSLFRIDGS------ 384

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                    P FS + +K+A+       +  +Y+++       ++I +  +   +  +  
Sbjct: 385 --------FPSFSHDGKKIAFV-----GLPGMYVVNPDGSGGRRKIFSGNAFSTSWDWKR 431

Query: 268 NGKRALISVQKDEAMDIYSVDL----------QSNATERLTNTLFINISASYSPDSSQIV 317
           NG     S+  D A +   VD+          ++ + ++LT     N   S SPD   +V
Sbjct: 432 NG-VIYTSIGPDFASESTEVDVVAISLGDDDDETISMKKLTVGGENNAFPSPSPDGKWVV 490

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS----GEKF 371
           F S R G + LY++ +   +   I +  E  + D    WSP G+ IAF           F
Sbjct: 491 FRSGRSGNKNLYIIDAEDGEAGGIRRLTEGPWSDTMCNWSPDGEWIAFASDRHAPGSGSF 550

Query: 372 AIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDG------------DTGS 416
           AI ++  +G+  R +V   +      P + P  +SL+F+                     
Sbjct: 551 AIYMVHPNGTGLRRVVHSGDGGRTNHPWFGPDSKSLVFTSDYAAVSAEPVSNPHHYQPYG 610

Query: 417 KLYSIDLNGRNETLINTPAY-ASDPQWVGFM 446
           +++++ ++G N   +   ++    P W  ++
Sbjct: 611 EIFTVHIDGSNIRRLTHNSFEDGTPSWTPYL 641



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 82/224 (36%), Gaps = 44/224 (19%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL---------- 301
           R+ +  S+     F+      L   +++ ++++Y   + S+  E L +            
Sbjct: 62  RLTDGVSVNYNGNFAPASDSILFVSERNGSLNLYLSPVPSSRREALESASSSAATLSPLL 121

Query: 302 -----FINISASYSPDSSQIVFESD-------REGKEQLYVMQSNGSDQKRISQDKEASY 349
                 +    S +PD S++V+ S        R     +Y  + +    +R++    A  
Sbjct: 122 PWEPIALKDRPSLTPDGSRLVYVSTAVPAAEPRSSWAAVYSTELSTGRTRRLTPLGVA-D 180

Query: 350 FDPVWSPQGDLIAFTKFSGEKF---------AIGVMK-KDGSQERLLVEDSNLQAPTWSP 399
           F P  SP G+  A        +          I V +  DGS+  L + D     P+W+ 
Sbjct: 181 FSPAVSPSGEWTAAASPGAAGWSGEVEDLRTDIYVFRTADGSRRSLAIRDGGW--PSWA- 237

Query: 400 SGRSLIFSRKKDGDTGSKLY----SIDLNG---RNETLINTPAY 436
              ++ F R +D D    +Y    S+  +G    +   I  P +
Sbjct: 238 DETTVFFHR-RDSDGWYGVYRAEISVTGDGVEAASVERITPPGF 280



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 66/212 (31%), Gaps = 40/212 (18%)

Query: 269 GKRALISV--QKDEAMDIYSVDLQSN------ATERLTNTLFINISASYSPDSSQIVFES 320
           G   + +   +     DI+S+ L  +         RLT+ + +N + +++P S  I+F S
Sbjct: 27  GGTIVFTTLGRSRYEFDIFSLPLAPSPHNPAAEELRLTDGVSVNYNGNFAPASDSILFVS 86

Query: 321 DREGKEQLYVMQSNGS--------------DQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +R G   LY+     S                  +  +  A    P  +P G  + +   
Sbjct: 87  ERNGSLNLYLSPVPSSRREALESASSSAATLSPLLPWEPIALKDRPSLTPDGSRLVYVST 146

Query: 367 -------SGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSK- 417
                       A+   +    + R L        +P  SPSG     +         + 
Sbjct: 147 AVPAAEPRSSWAAVYSTELSTGRTRRLTPLGVADFSPAVSPSGEWTAAASPGAAGWSGEV 206

Query: 418 ------LYSI-DLNGRNETLINTPAYASDPQW 442
                 +Y     +G   +L         P W
Sbjct: 207 EDLRTDIYVFRTADGSRRSLAIRDG--GWPSW 236


>gi|284040547|ref|YP_003390477.1| peptidase S41 [Spirosoma linguale DSM 74]
 gi|283819840|gb|ADB41678.1| peptidase S41 [Spirosoma linguale DSM 74]
          Length = 1097

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 56/257 (21%), Positives = 100/257 (38%), Gaps = 30/257 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           TP+      EP  SP+  ++A+ +    DI  V           + + +       P +S
Sbjct: 29  TPTPKFAYAEPSLSPDGAEIAFVS--GGDIWTV----PAAGGEARLLVSHPDNESRPLYS 82

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DRE 323
            +GK       +    D+Y + L++  T+RLT      +  ++S D   I F+S   D  
Sbjct: 83  PDGKYLAFVSSRTGNGDVYLLTLETGTTKRLTYDDGAEVLNAWSRDGKMIYFQSTAKDIS 142

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------------KFSGEK 370
           G   +Y +  NG     I+ D+ A+ F    SP G  +AF+                 ++
Sbjct: 143 GMNDIYRVSVNGGTPMAITADRYANEFYSAPSPDGKTLAFSARGIASNQWWRKGHSHLDE 202

Query: 371 FAIGVMKKD-----GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             I ++  D      + ERL    +    P WS  G++L +   +    G  L+++ L G
Sbjct: 203 SEIWLLHTDAKKAATAYERLTEGGAKELWPMWSADGKALFYVSDR--TRGQNLWTLPLGG 260

Query: 426 RNETLIN-TPAYASDPQ 441
           +   L + +      P 
Sbjct: 261 KPTMLTSFSNGRVLWPS 277



 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 51/214 (23%), Positives = 93/214 (43%), Gaps = 17/214 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +KVA+  + +     V+   T+      RI    +    P ++ N +  +   Q
Sbjct: 332 ALSPDGKKVAFVAHGE-----VFAASTKDGGDATRISTSAANESQPVWTPNSRSLVYVSQ 386

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D A  +Y  D  +    RLT+    + S  +SPD   + +   R G ++L V+      
Sbjct: 387 RDGAAHLYRYDFATRDETRLTDGALDDSSPVFSPDGKSLAYV--RNG-QELRVLDIATKK 443

Query: 338 QKRIS-----QDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLV--ED 389
            + +      +    S    VWSP G  IAF  +  + F  I V+   G + + +    +
Sbjct: 444 DRLLKKAYLGRPPFGSNGAVVWSPDGKWIAFASYGAKTFRNISVIPAIGGESKPVSFLAN 503

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +     TWSP G+ ++FS  +  +T +++  IDL
Sbjct: 504 TFGGNVTWSPDGKYILFSTTQRTET-AQIARIDL 536



 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 53/329 (16%), Positives = 116/329 (35%), Gaps = 54/329 (16%)

Query: 155 AHTISDDIYQSITGEK--GDFNSRILFVSE---SVVSGIIKNSLCVMDRDG---ANIRYL 206
           A   +++ Y + + +     F++R +  ++      S + ++ + ++  D    A     
Sbjct: 162 ADRYANEFYSAPSPDGKTLAFSARGIASNQWWRKGHSHLDESEIWLLHTDAKKAATAYER 221

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRF 265
                     P +S + + + Y +          L    +   P  + +F    +L P  
Sbjct: 222 LTEGGAKELWPMWSADGKALFYVSDRTRGQ---NLWTLPLGGKPTMLTSFSNGRVLWPSI 278

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLT-------NTLFINI--------SASYS 310
           S +GK  +     +    ++  D+ S  T  L+        +  ++           + S
Sbjct: 279 SYDGKSIVF----ERDFQLWKYDVASKQTAPLSVKLRGVAASPAVDRLKLTNQFRELALS 334

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD  ++ F +     E       +G D  RIS    A+   PVW+P    + +       
Sbjct: 335 PDGKKVAFVAH---GEVFAASTKDGGDATRIST-SAANESQPVWTPNSRSLVYVSQRDGA 390

Query: 371 FAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +         E  L + + +  +P +SP G+SL + R      G +L  +D+  + + 
Sbjct: 391 AHLYRYDFATRDETRLTDGALDDSSPVFSPDGKSLAYVRN-----GQELRVLDIATKKDR 445

Query: 430 LINTP-------------AYASDPQWVGF 445
           L+                 ++ D +W+ F
Sbjct: 446 LLKKAYLGRPPFGSNGAVVWSPDGKWIAF 474



 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 62/302 (20%), Positives = 112/302 (37%), Gaps = 40/302 (13%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--- 230
           + ++++   +       N +  +  +G     +T  R    F    SP+ + +A++    
Sbjct: 128 DGKMIYFQSTAKDISGMNDIYRVSVNGGTPMAITADRYANEFYSAPSPDGKTLAFSARGI 187

Query: 231 ---------YDDEDILRVYLMDTRIDRAP---KRIGNFRSMILAPRFSSNGKRALISVQK 278
                    +   D   ++L+ T   +A    +R+    +  L P +S++GK       +
Sbjct: 188 ASNQWWRKGHSHLDESEIWLLHTDAKKAATAYERLTEGGAKELWPMWSADGKALFYVSDR 247

Query: 279 DEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               +++++ L       LT+ +    +  S S D   IVFE D     QL+        
Sbjct: 248 TRGQNLWTLPL-GGKPTMLTSFSNGRVLWPSISYDGKSIVFERD----FQLWKYDVASKQ 302

Query: 338 QKRISQDKEASYFDPVW--------------SPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +S         P                SP G  +AF    GE FA       G   
Sbjct: 303 TAPLSVKLRGVAASPAVDRLKLTNQFRELALSPDGKKVAFVAH-GEVFAASTKD-GGDAT 360

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQW 442
           R+    +N   P W+P+ RSL++  ++DG   + LY  D   R+ET +   A   S P +
Sbjct: 361 RISTSAANESQPVWTPNSRSLVYVSQRDG--AAHLYRYDFATRDETRLTDGALDDSSPVF 418

Query: 443 VG 444
             
Sbjct: 419 SP 420



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 77/234 (32%), Gaps = 30/234 (12%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              L + L    I + P      +     P  S +G             DI++V      
Sbjct: 10  RSALLISLAAPAIAQTPPATPTPKFAYAEPSLSPDGAEIAFVS----GGDIWTVPAAGGE 65

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              L +         YSPD   + F S R G   +Y++       KR++ D  A   +  
Sbjct: 66  ARLLVSHPDNESRPLYSPDGKYLAFVSSRTGNGDVYLLTLETGTTKRLTYDDGAEVLN-A 124

Query: 354 WSPQGDLIAFTKFS---GEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIF 406
           WS  G +I F   +        I  +  +G     +  D        AP  SP G++L F
Sbjct: 125 WSRDGKMIYFQSTAKDISGMNDIYRVSVNGGTPMAITADRYANEFYSAP--SPDGKTLAF 182

Query: 407 SRK--------KDGDT---GSKLYSIDLNGRN-----ETLINTPAYASDPQWVG 444
           S +        + G +    S+++ +  + +      E L    A    P W  
Sbjct: 183 SARGIASNQWWRKGHSHLDESEIWLLHTDAKKAATAYERLTEGGAKELWPMWSA 236



 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 94/274 (34%), Gaps = 34/274 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  +   G   R L    D     P +SP+ + +A+ +    +   VYL+        K
Sbjct: 55  DIWTVPAAGGEARLLVSHPDN-ESRPLYSPDGKYLAFVSSRTGNG-DVYLLTLETG-TTK 111

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTNTL-FINISA 307
           R+       +   +S +GK               DIY V +       +T         +
Sbjct: 112 RLTYDDGAEVLNAWSRDGKMIYFQSTAKDISGMNDIYRVSVNGGTPMAITADRYANEFYS 171

Query: 308 SYSPDSSQIVFESD--------REGKEQ-----LYVMQSNGSDQ----KRISQDKEASYF 350
           + SPD   + F +         R+G        ++++ ++        +R+++   A   
Sbjct: 172 APSPDGKTLAFSARGIASNQWWRKGHSHLDESEIWLLHTDAKKAATAYERLTEGG-AKEL 230

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
            P+WS  G  + +         +  +   G    L    +  +  P+ S  G+S++F R 
Sbjct: 231 WPMWSADGKALFYVSDRTRGQNLWTLPLGGKPTMLTSFSNGRVLWPSISYDGKSIVFERD 290

Query: 410 KDGDTGSKLYSIDLNGRNETLINTP--AYASDPQ 441
                  +L+  D+  +    ++      A+ P 
Sbjct: 291 ------FQLWKYDVASKQTAPLSVKLRGVAASPA 318



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 70/338 (20%), Positives = 129/338 (38%), Gaps = 54/338 (15%)

Query: 153 KIAHTISDDIYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANI--RYLT 207
            +AH    +++ + T + GD    ++     S+ V +   ++ + V  RDGA    RY  
Sbjct: 342 FVAHG---EVFAASTKDGGDATRISTSAANESQPVWTPNSRSLVYVSQRDGAAHLYRYDF 398

Query: 208 PSRDQILFE--------PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFR 257
            +RD+            P FSP+ + +AY    +   LRV  + T+ DR  K+  +G   
Sbjct: 399 ATRDETRLTDGALDDSSPVFSPDGKSLAYV--RNGQELRVLDIATKKDRLLKKAYLGRPP 456

Query: 258 -SMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATER---LTNTLFINISASYSPD 312
                A  +S +GK    +    +   +I  +      ++    L NT   N+  ++SPD
Sbjct: 457 FGSNGAVVWSPDGKWIAFASYGAKTFRNISVIPAIGGESKPVSFLANTFGGNV--TWSPD 514

Query: 313 SSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW------SPQGDLIAFTK 365
              I+F  + R    Q+  +       K   +D+    F+         +P    +A T 
Sbjct: 515 GKYILFSTTQRTETAQIARIDLVPRSPK-FREDQFRDLFNEEVPKTLKPAPTSPAVAKTT 573

Query: 366 FSGEK----FAIGVMKKDGSQERLLVED-----------SNLQAPTWSPSGRSLIFSRKK 410
                         + K GS  +++ ED            ++ A + S  G++L+     
Sbjct: 574 LRDTSTSALGDTAKLGKSGSPTKIVFEDIRQRLSLLPVGVDVDAHSISKDGKTLLLIATV 633

Query: 411 DGDTGSKLYSIDLNGRNE----TLINTPAYASDPQWVG 444
            G      YS+D  GR++     L +T    +  Q+  
Sbjct: 634 AGQQNLYTYSLDELGRDQSVARQLTSTAGNKNGAQFSP 671



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 79/247 (31%), Gaps = 38/247 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMD--TRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           +SP+ + +A+A+Y  +    + ++       +    + N     +   +S +GK  L S 
Sbjct: 465 WSPDGKWIAFASYGAKTFRNISVIPAIGGESKPVSFLANTFGGNV--TWSPDGKYILFST 522

Query: 277 -QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY------ 329
            Q+ E   I  +DL   + +      F ++     P + +    S    K  L       
Sbjct: 523 TQRTETAQIARIDLVPRSPK-FREDQFRDLFNEEVPKTLKPAPTSPAVAKTTLRDTSTSA 581

Query: 330 -----VMQSNGSDQ--------KRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                 +  +GS          +R+S             S  G  +        +  +  
Sbjct: 582 LGDTAKLGKSGSPTKIVFEDIRQRLSLLPVGVDVDAHSISKDGKTLLLIATVAGQQNLYT 641

Query: 376 MKKDG-----SQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              D      S  R L     N     +SP G+ + +  +       ++ SI L+ R   
Sbjct: 642 YSLDELGRDQSVARQLTSTAGNKNGAQFSPDGKEIYYLEQ------GRIQSITLDKREPR 695

Query: 430 LINTPAY 436
            +   A 
Sbjct: 696 PLAVTAE 702


>gi|182416136|ref|YP_001821202.1| WD40 domain-containing protein [Opitutus terrae PB90-1]
 gi|177843350|gb|ACB77602.1| WD40 domain protein beta Propeller [Opitutus terrae PB90-1]
          Length = 518

 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 85/210 (40%), Gaps = 21/210 (10%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--- 278
           + +++  + +  ED  R  +               +S      +S +GK  + +  +   
Sbjct: 308 DGKQLGISHHTAEDDGRSVVYKLPSTGGTPVRVTPKSPSYFHGWSPDGKWMVYTGGRKET 367

Query: 279 ---DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               +  DIY +        RLTN+  ++    +S D   I F S R G  QL+ M+ +G
Sbjct: 368 PGGPDKYDIYKISADGGEEVRLTNSPGLSDGPEFSRDGQWIYFNSTRTGLMQLWRMRPDG 427

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----------KFAIGVMKKDGSQERL 385
           S Q++++ D+  ++F P  SP G  IAF  +  +          +  + +M   G Q R+
Sbjct: 428 SGQEQLTNDEFNNWF-PHLSPDGKWIAFISYGQDVKPSEHPYYKQVYLRLMPASGGQPRV 486

Query: 386 LV----EDSNLQAPTWSPSGRSLIFSRKKD 411
           +         +  P+W+P    + F    D
Sbjct: 487 IAYVYGGQGTINVPSWAPDSTRIAFVSNTD 516



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 91/240 (37%), Gaps = 26/240 (10%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD--IY 285
           Y  Y D     + +++    +    + +      AP +  + K  L+++    A    + 
Sbjct: 221 YVPYRDYIGAHLEILNVFTGQLA-IVHSSPEQFEAPNWFPDHKTLLVNISGPGANKGRLQ 279

Query: 286 SVDLQSNATERLTNTLF--INISASYSPDSSQIVF---ESDREGKEQLYVMQSNGSDQKR 340
           ++DL +  T  L        N     + D  Q+      ++ +G+  +Y + S G    R
Sbjct: 280 TLDLVTKQTALLDTGFATRNNNDHVLTFDGKQLGISHHTAEDDGRSVVYKLPSTGGTPVR 339

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVMKKDGSQERLLVED-SNLQ 393
           ++    + +    WSP G  + +T          +K+ I  +  DG +E  L        
Sbjct: 340 VTPKSPSYFHG--WSPDGKWMVYTGGRKETPGGPDKYDIYKISADGGEEVRLTNSPGLSD 397

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGFM 446
            P +S  G+ + F+  + G    +L+ +  +G  +  +         P  + D +W+ F+
Sbjct: 398 GPEFSRDGQWIYFNSTRTGLM--QLWRMRPDGSGQEQLTNDEFNNWFPHLSPDGKWIAFI 455


>gi|94494977|ref|ZP_01301558.1| hypothetical protein SKA58_00750 [Sphingomonas sp. SKA58]
 gi|94425243|gb|EAT10263.1| hypothetical protein SKA58_00750 [Sphingomonas sp. SKA58]
          Length = 978

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 47/221 (21%), Positives = 90/221 (40%), Gaps = 8/221 (3%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A+       + +   +       P          +A   S +GK   + +Q      ++
Sbjct: 4   IAWLGTAAPVLAQPANLPPPGGEKPIAFDVHEGTSMAVSASPDGKWLAVDLQGS----LW 59

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            +        R+T+         ++PD S +++ + R+G   L+ ++ +GSD +R++Q  
Sbjct: 60  IIPAAGGKARRITDYFNDARQPVWAPDGSHLLYFAYRDGGYDLWTIKPDGSDMRRLTQ-G 118

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSL 404
                +PV+SP G  IAF+      + I  M       + +  +    + PTWSP GR +
Sbjct: 119 AYDDREPVYSPDGKTIAFSSDRSGNYDIWTMDVATGAMKQISSNPREDRMPTWSPDGRRV 178

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLI-NTPAYASDPQWVG 444
            ++   +G  G  LY  DL    E+L+      A  P +  
Sbjct: 179 AYA-GAEGMMGGALYVTDLATGQESLLKKVEGKADAPSFGP 218



 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 10/209 (4%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G          +        SP+ + +A       D+     +        +RI ++ + 
Sbjct: 24  GGEKPIAFDVHEGTSMAVSASPDGKWLAV------DLQGSLWIIPAAGGKARRITDYFND 77

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              P ++ +G   L    +D   D++++    +   RLT   + +    YSPD   I F 
Sbjct: 78  ARQPVWAPDGSHLLYFAYRDGGYDLWTIKPDGSDMRRLTQGAYDDREPVYSPDGKTIAFS 137

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKK 378
           SDR G   ++ M       K+IS +       P WSP G  +A+    G    A+ V   
Sbjct: 138 SDRSGNYDIWTMDVATGAMKQISSNPREDRM-PTWSPDGRRVAYAGAEGMMGGALYVTDL 196

Query: 379 DGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
              QE LL + +    AP++ P G +L +
Sbjct: 197 ATGQESLLKKVEGKADAPSFGP-GGALAY 224



 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/202 (25%), Positives = 76/202 (37%), Gaps = 22/202 (10%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           I  PR S +G R       D    +Y V  +    E LT    ++  A +SPD  +IVF 
Sbjct: 309 ITHPRLSPDGSRIAFVALGD----LYIVSSKGGTPENLTKDAALDADADWSPDGRRIVFS 364

Query: 320 SDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           SDR  G  QL++        ++++           WSP G  IAF    G     GV   
Sbjct: 365 SDRVGGLPQLFIKDLKTGKDRQLTNMDTQPLGA-AWSPDGKQIAFIDVDGRWGVAGVCVV 423

Query: 379 D---GSQERLLVEDSNLQAPTWSPSGRSLIFS-----RKKDGDTGSKLYSIDLNGRNETL 430
           D   G   RL        +P+WS  G+ ++ S          +  +++Y I ++G  +  
Sbjct: 424 DVASGKVTRLQTSLGQPGSPSWSADGKYVVISLSYKYSNSFREGTNQVYVIPVDGTTKPF 483

Query: 431 INTP--------AYASDPQWVG 444
              P           S P W  
Sbjct: 484 WQIPQENMSLDTRSGSGPAWSP 505



 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 65/340 (19%), Positives = 128/340 (37%), Gaps = 41/340 (12%)

Query: 90  KITNPDSIPRFQ-DW-NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
           +++  +++  F+  W    G   +  G+V + G  +  V+F         +++   +  +
Sbjct: 240 QVSGTENVFPFRVSWGTGGGYHYVSDGKVRQGGPRKSTVDF-----AATLEVVRPSYTRA 294

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
              W   A   +  I        G   SRI FV+           L ++   G     LT
Sbjct: 295 KRDWDSTAPRKALGITHPRLSPDG---SRIAFVAL--------GDLYIVSSKGGTPENLT 343

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                      +SP+ +++ +++     + ++++ D +  +  +++ N  +  L   +S 
Sbjct: 344 KDAALDADA-DWSPDGRRIVFSSDRVGGLPQLFIKDLKTGKD-RQLTNMDTQPLGAAWSP 401

Query: 268 NGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------ 319
           +GK+        +     +  VD+ S    RL  +L    S S+S D   +V        
Sbjct: 402 DGKQIAFIDVDGRWGVAGVCVVDVASGKVTRLQTSLGQPGSPSWSADGKYVVISLSYKYS 461

Query: 320 -SDREGKEQLYVMQSNGSDQK--RISQDK----EASYFDPVWSPQGDLIAFTKFSGEKFA 372
            S REG  Q+YV+  +G+ +   +I Q+       S   P WSP G  +A          
Sbjct: 462 NSFREGTNQVYVIPVDGTTKPFWQIPQENMSLDTRSGSGPAWSPDGTRMA--GIYEGLLK 519

Query: 373 IGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           +  +  D       R    D     PTWS  G++++    
Sbjct: 520 VWPVAADAKPLGPARSYTSDIAF-FPTWSGDGKTILVQSN 558



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 61/309 (19%), Positives = 105/309 (33%), Gaps = 41/309 (13%)

Query: 156 HTISDDIYQSITGEKG--DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           H +SD   +     K   DF + +  V  S        +    D D    R         
Sbjct: 261 HYVSDGKVRQGGPRKSTVDFAATLEVVRPS-------YTRAKRDWDSTAPRKALG----- 308

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  PR SP+  ++A+    D        + +     P+ +    ++     +S +G+R +
Sbjct: 309 ITHPRLSPDGSRIAFVALGD------LYIVSSKGGTPENLTKDAALDADADWSPDGRRIV 362

Query: 274 ISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--ESDREGKEQLYV 330
            S  +      ++  DL++    +LTN     + A++SPD  QI F     R G   + V
Sbjct: 363 FSSDRVGGLPQLFIKDLKTGKDRQLTNMDTQPLGAAWSPDGKQIAFIDVDGRWGVAGVCV 422

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFSGEKFAIGVMKKDGS-- 381
           +        R+ Q        P WS  G  +  +        F      + V+  DG+  
Sbjct: 423 VDVASGKVTRL-QTSLGQPGSPSWSADGKYVVISLSYKYSNSFREGTNQVYVIPVDGTTK 481

Query: 382 ------QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                 QE + ++  +   P WSP G  +      +G       + D          T  
Sbjct: 482 PFWQIPQENMSLDTRSGSGPAWSPDGTRMA--GIYEGLLKVWPVAADAKPLGPARSYTSD 539

Query: 436 YASDPQWVG 444
            A  P W G
Sbjct: 540 IAFFPTWSG 548



 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 115/356 (32%), Gaps = 76/356 (21%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           A  I+D    +         S +L+ +           L  +  DG+++R LT       
Sbjct: 68  ARRITDYFNDARQPVWAPDGSHLLYFAYRDGG----YDLWTIKPDGSDMRRLTQG-AYDD 122

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            EP +SP+ + +A+++ D      ++ MD       K+I +       P +S +G+R   
Sbjct: 123 REPVYSPDGKTIAFSS-DRSGNYDIWTMDVATGAM-KQISSNPREDRMPTWSPDGRRVAY 180

Query: 275 SVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +  +      +Y  DL +     L        + S+ P    + +         L++   
Sbjct: 181 AGAEGMMGGALYVTDLATGQESLLKKVEGKADAPSFGP-GGALAYVVQDASGSHLFIDDK 239

Query: 334 NGSDQK-----RISQDKEASYF-------------------------------------- 350
             S  +     R+S      Y                                       
Sbjct: 240 QVSGTENVFPFRVSWGTGGGYHYVSDGKVRQGGPRKSTVDFAATLEVVRPSYTRAKRDWD 299

Query: 351 -----------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWS 398
                       P  SP G  IAF         + ++   G     L +  +      WS
Sbjct: 300 STAPRKALGITHPRLSPDGSRIAFVALGD----LYIVSSKGGTPENLTKDAALDADADWS 355

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN------TPAYASDPQWVGFMD 447
           P GR ++FS  + G    +L+  DL  G++  L N        A++ D + + F+D
Sbjct: 356 PDGRRIVFSSDRVGGL-PQLFIKDLKTGKDRQLTNMDTQPLGAAWSPDGKQIAFID 410



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 50/160 (31%), Gaps = 21/160 (13%)

Query: 217 PRFSPNQQKVA------YATYDDEDILRVYLMDTRIDRAP------KRIGNFRSMILAPR 264
           P +S + + V       Y+    E   +VY++       P      + +         P 
Sbjct: 443 PSWSADGKYVVISLSYKYSNSFREGTNQVYVIPVDGTTKPFWQIPQENMSLDTRSGSGPA 502

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G R     +    +   + D +     R + T  I    ++S D   I+ +S    
Sbjct: 503 WSPDGTRMAGIYEGLLKVWPVAADAKPLGPAR-SYTSDIAFFPTWSGDGKTILVQS---- 557

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + L  +         +  D   +    +  P G  I   
Sbjct: 558 NDALKTVNLETG----VVTDVPINLTYRLAKPTGRTIIHV 593


>gi|42523526|ref|NP_968906.1| component of the Tol biopolymer transport system [Bdellovibrio
           bacteriovorus HD100]
 gi|39575732|emb|CAE79899.1| component of the Tol biopolymer transport system [Bdellovibrio
           bacteriovorus HD100]
          Length = 974

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 57/279 (20%), Positives = 105/279 (37%), Gaps = 54/279 (19%)

Query: 219 FSPNQQKVAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV- 276
           FSP+ +K+ + +  +  +      +   I     R+              + K+ L S  
Sbjct: 69  FSPDGKKMIFQSEREPGNPFYQMYILDLITGDTTRVSPGHGKTTCGWIHPSMKKVLYSST 128

Query: 277 ---------------------------QKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
                                        D++ D++S DL     +RLT     +   SY
Sbjct: 129 HLDLETKKKTQEEYDNRKKAVKARYSWSFDDSYDVFSSDLSGKNIQRLTREKGYDAEGSY 188

Query: 310 SPDSSQIVFESDREGKEQ-------------------LYVMQSNGSDQKRISQDKEASYF 350
           SPD   I F S+R G  +                   +Y+M+++G+  KR++ D +    
Sbjct: 189 SPDGQWIAFASNRAGYSEKLEGEDKKLFEQDPSYMMDIYIMKADGTQVKRLT-DSKGYDG 247

Query: 351 DPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFS 407
            P +S  G  I + +FS  G    I  M  DGS+++ + +  ++  AP + PSG  +IF 
Sbjct: 248 GPFFSADGKKITWRRFSPNGSTAEIFTMNVDGSEQKQVTKLKSMSWAPYFHPSGDYIIFG 307

Query: 408 RKKDGDTGSKLYSIDLNGRNE--TLINTPAYASDPQWVG 444
               G    +L+ +D  G+     + +   +   P +  
Sbjct: 308 SSVLGYHNFELFIVDAEGKKAPVRVTSDEGFDGLPVFTP 346



 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 97/234 (41%), Gaps = 25/234 (10%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           +    +    S      +   D  G NI+ LT  +     E  +SP+ Q +A+A+     
Sbjct: 146 KKAVKARYSWSFDDSYDVFSSDLSGKNIQRLTREK-GYDAEGSYSPDGQWIAFASNRAGY 204

Query: 236 ILRV-------------YLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALI--SV 276
             ++             Y+MD  I        KR+ + +     P FS++GK+       
Sbjct: 205 SEKLEGEDKKLFEQDPSYMMDIYIMKADGTQVKRLTDSKGYDGGPFFSADGKKITWRRFS 264

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSN 334
                 +I+++++  +  +++T    ++ +  + P    I+F S   G    +L+++ + 
Sbjct: 265 PNGSTAEIFTMNVDGSEQKQVTKLKSMSWAPYFHPSGDYIIFGSSVLGYHNFELFIVDAE 324

Query: 335 GSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLL 386
           G     R++ D E     PV++P G+ +++T  +      I + K D +Q R L
Sbjct: 325 GKKAPVRVTSD-EGFDGLPVFTPDGNSLSWTHRNEKGDSQIFIAKWDDAQARKL 377



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 47/123 (38%), Gaps = 4/123 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAP 250
            +  M+ DG+  + +T  +  + + P F P+   + + +         ++++D    +AP
Sbjct: 271 EIFTMNVDGSEQKQVTKLKS-MSWAPYFHPSGDYIIFGSSVLGYHNFELFIVDAEGKKAP 329

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFIN-ISAS 308
            R+ +       P F+ +G     + + +     I+          +L      +  + S
Sbjct: 330 VRVTSDEGFDGLPVFTPDGNSLSWTHRNEKGDSQIFIAKWDDAQARKLLGLPAQDPAAGS 389

Query: 309 YSP 311
            SP
Sbjct: 390 LSP 392



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 5/102 (4%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
                GD+      +  S V G     L ++D +G        S +     P F+P+   
Sbjct: 296 YFHPSGDY-----IIFGSSVLGYHNFELFIVDAEGKKAPVRVTSDEGFDGLPVFTPDGNS 350

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           +++   +++   ++++      +A K +G       A   S 
Sbjct: 351 LSWTHRNEKGDSQIFIAKWDDAQARKLLGLPAQDPAAGSLSP 392


>gi|167621951|ref|YP_001672245.1| amidohydrolase [Shewanella halifaxensis HAW-EB4]
 gi|167351973|gb|ABZ74586.1| amidohydrolase [Shewanella halifaxensis HAW-EB4]
          Length = 1064

 Score =  140 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 80/211 (37%), Gaps = 25/211 (11%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +I       +    S NGK  +  +  D    IY + +     + L   +   +   YSP
Sbjct: 44  KIDVSEGTWMNVSVSPNGKHVVFDLLGD----IYQMPIDGGEAKPLAEGIAWQMQPVYSP 99

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FT-KF 366
           D   I F SD +G + +++MQ++GS+ + ++ +       P WSP G  +     FT   
Sbjct: 100 DGKYIAFTSDEDGGDNIWIMQADGSNPRPVTNETFRLLNSPAWSPDGQYLVARKHFTGSR 159

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDT 414
           S     + +    G     L E  N Q     P +SP GR + FS+            D+
Sbjct: 160 SLGAGEVWMYHVAGGDGVKLTERPNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDS 219

Query: 415 GSKLYSI----DLNGRNETLINTPAYASDPQ 441
              +Y I       G  E LI     A  P 
Sbjct: 220 VKGIYKIKRYDTQTGDIEVLIQGTGGAIRPT 250



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 91/236 (38%), Gaps = 31/236 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN + V +    D     +Y M        K +    +  + P +S +GK    +  
Sbjct: 56  SVSPNGKHVVFDLLGD-----IYQMPID-GGEAKPLAEGIAWQMQPVYSPDGKYIAFTSD 109

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVM 331
           +D   +I+ +    +    +TN  F +  S ++SPD   +V    F   R  G  ++++ 
Sbjct: 110 EDGGDNIWIMQADGSNPRPVTNETFRLLNSPAWSPDGQYLVARKHFTGSRSLGAGEVWMY 169

Query: 332 QSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVM 376
              G D  ++++         +P +SP G  I F++ +                + I   
Sbjct: 170 HVAGGDGVKLTERPNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVKGIYKIKRY 229

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
                   +L++       PT SP G+ L + ++      S LY +DL +G  E L
Sbjct: 230 DTQTGDIEVLIQGTGGAIRPTPSPDGKKLAYIKRDG--FQSSLYLLDLKSGETEKL 283



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 55/321 (17%), Positives = 102/321 (31%), Gaps = 64/321 (19%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATY 231
            I F S+          + +M  DG+N R +T    ++L  P +SP+ Q +     +   
Sbjct: 103 YIAFTSDEDGGDN----IWIMQADGSNPRPVTNETFRLLNSPAWSPDGQYLVARKHFTGS 158

Query: 232 DDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALIS----------VQKD 279
                  V++         K     N +  +  P +S +G+    S            KD
Sbjct: 159 RSLGAGEVWMYHVAGGDGVKLTERPNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKD 218

Query: 280 ---EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                  I   D Q+   E L       I  + SPD  ++ +      +  LY++     
Sbjct: 219 SVKGIYKIKRYDTQTGDIEVLIQGTGGAIRPTPSPDGKKLAYIKRDGFQSSLYLLDLKSG 278

Query: 337 DQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           + +++          +      Y    W+   + I F   +G+   + V  K  +Q    
Sbjct: 279 ETEKLYGDLDRDMQETWAIHGVYPTMSWTADNEEILFWA-NGKINKLDVESKSVAQIPFT 337

Query: 387 VEDSNLQAPT---------------------WSPSGRSLIFSRKKDGDTGSKLYSIDL-N 424
           V+      P                       SP G+ + F      +   K++   L +
Sbjct: 338 VKSERAVQPAVRFTQDLDKDVFDVKMLRMAQVSPDGKKVAF------EALGKIWVKSLPD 391

Query: 425 GRNETLINTPAYASD--PQWV 443
           G+   L    +   +  PQW 
Sbjct: 392 GKMSRLTKLDSDLRELFPQWS 412



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 62/327 (18%), Positives = 116/327 (35%), Gaps = 59/327 (18%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQK 225
               D    +     +    +    + +    G +   LT  P+  + L EP +SP+ + 
Sbjct: 141 AWSPDGQYLVARKHFTGSRSLGAGEVWMYHVAGGDGVKLTERPNEQKDLGEPAYSPDGRY 200

Query: 226 VA------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +             Y+    + I ++   DT+     + +       + P  S +GK+  
Sbjct: 201 IYFSQDATPGKTFHYSKDSVKGIYKIKRYDTQTGD-IEVLIQGTGGAIRPTPSPDGKKLA 259

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-----------ASYSPDSSQIVFESDR 322
              +      +Y +DL+S  TE+L   L  ++             S++ D+ +I+F +  
Sbjct: 260 YIKRDGFQSSLYLLDLKSGETEKLYGDLDRDMQETWAIHGVYPTMSWTADNEEILFWA-- 317

Query: 323 EGKEQLYVMQSNGSDQKRI----------------SQDKEASYFD------PVWSPQGDL 360
               ++  +        +I                +QD +   FD         SP G  
Sbjct: 318 --NGKINKLDVESKSVAQIPFTVKSERAVQPAVRFTQDLDKDVFDVKMLRMAQVSPDGKK 375

Query: 361 IAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSK 417
           +AF         I V    DG   RL   DS+L+   P WS  G+ ++F+   D + G+ 
Sbjct: 376 VAFEALG----KIWVKSLPDGKMSRLTKLDSDLRELFPQWSRDGKRIVFTTWDDQEQGTV 431

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
             +   N R + L N P    +P +  
Sbjct: 432 SLATVRNKRVKALTNEPGKYVEPTFSP 458



 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 85/200 (42%), Gaps = 19/200 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +KVA+       I    L D ++ R  K   + R   L P++S +GKR + +   D
Sbjct: 370 SPDGKKVAFEAL--GKIWVKSLPDGKMSRLTKLDSDLR--ELFPQWSRDGKRIVFTTWDD 425

Query: 280 EAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQLY 329
           +     S+  +++   + LTN     +  ++SPD   +V+   + G            LY
Sbjct: 426 QEQGTVSLATVRNKRVKALTNEPGKYVEPTFSPDGETVVYRKAKGGYITPRTWSQETGLY 485

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +  +G    +I+       + P +    D + F + SGE   +  +  +G ++R+    
Sbjct: 486 QVDIDGDKNTKITAAG----YQPQFGADNDRVYFME-SGETPQLASIGLNGFEKRVHYTS 540

Query: 390 SNLQAPTWSPSGRSLIFSRK 409
            +      SP G+ L F+ +
Sbjct: 541 KHATEFRVSPDGKQLAFAER 560



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 55/302 (18%), Positives = 105/302 (34%), Gaps = 55/302 (18%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             S  S      +   D    +I  L       +  P  SP+ +K+AY   D      +Y
Sbjct: 214 HYSKDSVKGIYKIKRYDTQTGDIEVLIQGTGGAI-RPTPSPDGKKLAYIKRD-GFQSSLY 271

Query: 241 LMDTRIDRAPKRIGNFR----------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           L+D +     K  G+             +     ++++ +  L          I  +D++
Sbjct: 272 LLDLKSGETEKLYGDLDRDMQETWAIHGVYPTMSWTADNEEILFWA----NGKINKLDVE 327

Query: 291 SNATERL----------------TNTLFINIS-------ASYSPDSSQIVFESDREGKEQ 327
           S +  ++                T  L  ++        A  SPD  ++ FE+      +
Sbjct: 328 SKSVAQIPFTVKSERAVQPAVRFTQDLDKDVFDVKMLRMAQVSPDGKKVAFEA----LGK 383

Query: 328 LYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQE 383
           ++V         R+++ D +     P WS  G  I FT +        ++  ++    + 
Sbjct: 384 IWVKSLPDGKMSRLTKLDSDLRELFPQWSRDGKRIVFTTWDDQEQGTVSLATVRNKRVKA 443

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-------LYSIDLNGRNETLINTPAY 436
            L  E      PT+SP G ++++ + K G    +       LY +D++G   T I    Y
Sbjct: 444 -LTNEPGKYVEPTFSPDGETVVYRKAKGGYITPRTWSQETGLYQVDIDGDKNTKITAAGY 502

Query: 437 AS 438
             
Sbjct: 503 QP 504



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 13/71 (18%)

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TP 434
           Q ++ V +      + SP+G+ ++F      D    +Y + ++G     +         P
Sbjct: 42  QIKIDVSEGTWMNVSVSPNGKHVVF------DLLGDIYQMPIDGGEAKPLAEGIAWQMQP 95

Query: 435 AYASDPQWVGF 445
            Y+ D +++ F
Sbjct: 96  VYSPDGKYIAF 106


>gi|77164951|ref|YP_343476.1| WD-40-like beta propeller repeat-containing protein [Nitrosococcus
           oceani ATCC 19707]
 gi|254433763|ref|ZP_05047271.1| hypothetical protein NOC27_694 [Nitrosococcus oceani AFC27]
 gi|76883265|gb|ABA57946.1| WD40-like Beta Propeller [Nitrosococcus oceani ATCC 19707]
 gi|207090096|gb|EDZ67367.1| hypothetical protein NOC27_694 [Nitrosococcus oceani AFC27]
          Length = 367

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 110/287 (38%), Gaps = 46/287 (16%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD------- 232
           + +S    +  +++  MD DG N+R ++  +         +P+ Q + YA+         
Sbjct: 80  IFQSTRDDLKCDAIFRMDADGKNVRQVSSGKGVTTCSF-IAPDDQAIIYASTHLAGDQCP 138

Query: 233 -DEDILRVYLMDTRID----------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
              D  + Y+                    R+ +         +S  G + + +  +   
Sbjct: 139 PKPDYSQGYVWPLYEGYDIFRADPEGGNRVRLTDTPGYDAEGVYSPKGDKIIFTSARTGD 198

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKE-------------- 326
           ++++ ++   +  E+LT+    +  A +S D   IV+ + R EGK               
Sbjct: 199 LELFMMNPDGSEVEQLTDQPGYDGGAFFSRDGQWIVWRASRPEGKALADYQSLLKQGLIR 258

Query: 327 ----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKK 378
               ++++M        +++ +  A+ F P W P G  I F+       G  F + ++  
Sbjct: 259 PSQLEIFIMNLEERKPIQLTDNGAAN-FGPYWHPDGKHIIFSSNMHNPKGRNFDLFLINV 317

Query: 379 DGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG--DTGSKLYSID 422
           D  +   +    +    P +S  G+ L+F+  ++G  +  + ++ +D
Sbjct: 318 DTREIEQITHHPDFDGFPMFSHDGKKLVFASNRNGKVEGETNVFMVD 364



 Score =  130 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 98/268 (36%), Gaps = 44/268 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS + +++ + +  D+             +  +++ + + +      + + +  + +   
Sbjct: 72  FSFDGKELIFQSTRDDLKCDAIFRMDADGKNVRQVSSGKGVTTCSFIAPDDQAIIYASTH 131

Query: 279 --------------------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                                E  DI+  D +     RLT+T   +    YSP   +I+F
Sbjct: 132 LAGDQCPPKPDYSQGYVWPLYEGYDIFRADPEGGNRVRLTDTPGYDAEGVYSPKGDKIIF 191

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------- 369
            S R G  +L++M  +GS+ ++++ D+        +S  G  I +     E         
Sbjct: 192 TSARTGDLELFMMNPDGSEVEQLT-DQPGYDGGAFFSRDGQWIVWRASRPEGKALADYQS 250

Query: 370 ----------KFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSK- 417
                     +  I +M  +  +   L ++      P W P G+ +IFS       G   
Sbjct: 251 LLKQGLIRPSQLEIFIMNLEERKPIQLTDNGAANFGPYWHPDGKHIIFSSNMHNPKGRNF 310

Query: 418 -LYSIDLNGRN-ETLINTPAYASDPQWV 443
            L+ I+++ R  E + + P +   P + 
Sbjct: 311 DLFLINVDTREIEQITHHPDFDGFPMFS 338



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 69/180 (38%), Gaps = 34/180 (18%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFD 351
             +LT     N  A +S D  +++F+S R+    + ++ M ++G + +++S  K      
Sbjct: 58  LRQLTFG-GQNAEAYFSFDGKELIFQSTRDDLKCDAIFRMDADGKNVRQVSSGK-GVTTC 115

Query: 352 PVWSPQGDLIAFTKFS--------------------GEKFAIGVMKKDGSQERLLVEDSN 391
              +P    I +                         E + I     +G     L +   
Sbjct: 116 SFIAPDDQAIIYASTHLAGDQCPPKPDYSQGYVWPLYEGYDIFRADPEGGNRVRLTDTPG 175

Query: 392 LQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAY------ASDPQWV 443
             A   +SP G  +IF+  + GD   +L+ ++ +G   E L + P Y      + D QW+
Sbjct: 176 YDAEGVYSPKGDKIIFTSARTGD--LELFMMNPDGSEVEQLTDQPGYDGGAFFSRDGQWI 233


>gi|294508417|ref|YP_003572475.1| conserved hypothetical protein, secreted [Salinibacter ruber M8]
 gi|294344745|emb|CBH25523.1| conserved hypothetical protein, secreted [Salinibacter ruber M8]
          Length = 1065

 Score =  139 bits (351), Expect = 7e-31,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 100/240 (41%), Gaps = 31/240 (12%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS---------MIL 261
           +Q+   P  SP+ + VA+ +  +     +++ D       + +   RS         +  
Sbjct: 329 NQLNISPAVSPDGRYVAFISRRNLFNTNLFVADAETGEIVQELEGTRSNPHFDALRFINS 388

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIV 317
           A  +S +G+R       D   +I + ++Q+      T T   N+ A    ++SPD   I 
Sbjct: 389 AGAWSPDGRRFAFITFADGRNEINTFNVQTGEIR--TRTAVENVGAIHNLAWSPDGQSIA 446

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---FSGEKFA-- 372
           F     G   LYV   +  + ++++ D+ A+   P WSP G+ +AFT      G  F   
Sbjct: 447 FSGLEGGLSDLYVYDLDQKNVRQLTNDRYAAL-QPTWSPDGETLAFTTDRGRDGTNFETL 505

Query: 373 ------IGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 IG++  +  + R +          P +SP GRS+ F   +DG     +Y  DL+
Sbjct: 506 EYGEERIGLIDVESGEIRTIRPFSTGMQHNPQFSPDGRSIYFVADQDG--FKDVYRYDLD 563



 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 24/215 (11%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATER-L--TNT-------LF 302
           G    + ++P  S +G+      +++    +++  D ++    + L  T +        F
Sbjct: 326 GADNQLNISPAVSPDGRYVAFISRRNLFNTNLFVADAETGEIVQELEGTRSNPHFDALRF 385

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLI 361
           IN + ++SPD  +  F +  +G+ ++        + + R + +   +  +  WSP G  I
Sbjct: 386 INSAGAWSPDGRRFAFITFADGRNEINTFNVQTGEIRTRTAVENVGAIHNLAWSPDGQSI 445

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGS---- 416
           AF+   G    + V   D    R L  D      PTWSP G +L F+  +  D  +    
Sbjct: 446 AFSGLEGGLSDLYVYDLDQKNVRQLTNDRYAALQPTWSPDGETLAFTTDRGRDGTNFETL 505

Query: 417 -----KLYSIDL-NGRNETLIN-TPAYASDPQWVG 444
                ++  ID+ +G   T+   +     +PQ+  
Sbjct: 506 EYGEERIGLIDVESGEIRTIRPFSTGMQHNPQFSP 540



 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 86/231 (37%), Gaps = 22/231 (9%)

Query: 179 FVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEP--------RFSPNQQKVAYA 229
           +V+      +   +L V D   G  ++ L  +R    F+          +SP+ ++ A+ 
Sbjct: 343 YVAFISRRNLFNTNLFVADAETGEIVQELEGTRSNPHFDALRFINSAGAWSPDGRRFAFI 402

Query: 230 TY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           T+ D  + +  + + T   R    + N    I    +S +G+    S  +    D+Y  D
Sbjct: 403 TFADGRNEINTFNVQTGEIRTRTAVENV-GAIHNLAWSPDGQSIAFSGLEGGLSDLYVYD 461

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----------GKEQLYVMQSNGSD 337
           L      +LTN  +  +  ++SPD   + F +DR            G+E++ ++     +
Sbjct: 462 LDQKNVRQLTNDRYAALQPTWSPDGETLAFTTDRGRDGTNFETLEYGEERIGLIDVESGE 521

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            + I         +P +SP G  I F         +     D      + E
Sbjct: 522 IRTIRPFSTGMQHNPQFSPDGRSIYFVADQDGFKDVYRYDLDEEATYRVTE 572



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 94/259 (36%), Gaps = 35/259 (13%)

Query: 161 DIYQSI--TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP---------- 208
           +I Q +  T     F++     S    S   +    +   DG N                
Sbjct: 366 EIVQELEGTRSNPHFDALRFINSAGAWSPDGRRFAFITFADGRNEINTFNVQTGEIRTRT 425

Query: 209 --SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    +SP+ Q +A++  +   +  +Y+ D    +  +++ N R   L P +S
Sbjct: 426 AVENVGAIHNLAWSPDGQSIAFSGLE-GGLSDLYVYDLD-QKNVRQLTNDRYAALQPTWS 483

Query: 267 SNGKRALISVQKD-----------EAMDIYSVDLQSNATERL-TNTLFINISASYSPDSS 314
            +G+    +  +                I  +D++S     +   +  +  +  +SPD  
Sbjct: 484 PDGETLAFTTDRGRDGTNFETLEYGEERIGLIDVESGEIRTIRPFSTGMQHNPQFSPDGR 543

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP------QGDLIAFTKFSG 368
            I F +D++G + +Y    +     R+++ K         SP      +   + F+ FS 
Sbjct: 544 SIYFVADQDGFKDVYRYDLDEEATYRVTELKTGVSGITALSPALSVARRSGRMMFSVFSN 603

Query: 369 EKFAI-GVMKKDGSQERLL 386
             ++I G+  ++   ER+ 
Sbjct: 604 GGYSIVGLSPEETKGERMT 622


>gi|85710151|ref|ZP_01041216.1| hypothetical protein NAP1_14738 [Erythrobacter sp. NAP1]
 gi|85688861|gb|EAQ28865.1| hypothetical protein NAP1_14738 [Erythrobacter sp. NAP1]
          Length = 1096

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 16/182 (8%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           RI       +    S +G     ++  D    IY++ +      R+ + L   +   +SP
Sbjct: 44  RIQTDEGTWMDVDVSPDGSTIAFNLLGD----IYTMPIAGGTPRRIADGLAWEVQPRFSP 99

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKF 366
           D ++I F SDR G + ++VM  +GSD+++++++       P WSP G  I       T  
Sbjct: 100 DGTKIAFTSDRGGGDNIWVMNVDGSDKRQVTKESFRLLNQPYWSPDGRFIIAKKHFTTSR 159

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSN------LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           S     I +    G     +VE ++      L  P +SP G ++ ++R         +Y+
Sbjct: 160 SAGTGEIWMYHVSGGGGVAIVERADEALQKELGEPVFSPDGEAIYYTRNTT-PGNQFIYA 218

Query: 421 ID 422
            D
Sbjct: 219 QD 220



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 32/236 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   +A+    D     +Y M       P+RI +  +  + PRFS +G +   +  + 
Sbjct: 58  SPDGSTIAFNLLGD-----IYTMPI-AGGTPRRIADGLAWEVQPRFSPDGTKIAFTSDRG 111

Query: 280 EAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV----FESDRE-GKEQLYVMQS 333
              +I+ +++  +   ++T   F  ++   +SPD   I+    F + R  G  ++++   
Sbjct: 112 GGDNIWVMNVDGSDKRQVTKESFRLLNQPYWSPDGRFIIAKKHFTTSRSAGTGEIWMYHV 171

Query: 334 NGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKF-------------SGEKFAIGVM 376
           +G       +R  +  +    +PV+SP G+ I +T+                  FAI   
Sbjct: 172 SGGGGVAIVERADEALQKELGEPVFSPDGEAIYYTRNTTPGNQFIYAQDSQTGIFAIERH 231

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             +  +    V+       PT SP G  + F R+      S+L+  DL    E +I
Sbjct: 232 DLETGEVTTAVDGYGGAVRPTPSPDGTEMAFVRRD--KDTSQLWVKDLATGAERMI 285



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 99/297 (33%), Gaps = 42/297 (14%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            I  ++G +    +    S ++  +   +  M   G   R +         +PRFSP+  
Sbjct: 44  RIQTDEGTWMDVDVSPDGSTIAFNLLGDIYTMPIAGGTPRRIADGL-AWEVQPRFSPDGT 102

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD- 279
           K+A+ + D      +++M+       +       ++  P +S +G+  +     +  +  
Sbjct: 103 KIAFTS-DRGGGDNIWVMNVDGSDKRQVTKESFRLLNQPYWSPDGRFIIAKKHFTTSRSA 161

Query: 280 --EAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDRE-GKEQLYVMQS 333
               + +Y V               +        +SPD   I +  +   G + +Y   S
Sbjct: 162 GTGEIWMYHVSGGGGVAIVERADEALQKELGEPVFSPDGEAIYYTRNTTPGNQFIYAQDS 221

Query: 334 NGS---------DQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                       +   ++   D       P  SP G  +AF +   +   + V       
Sbjct: 222 QTGIFAIERHDLETGEVTTAVDGYGGAVRPTPSPDGTEMAFVRRDKDTSQLWVKDLATGA 281

Query: 383 ERLLVED------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           ER++ +                    W+P GRS++F        G KL  ID +G N
Sbjct: 282 ERMIYDALDLDLQETWAVYGVYPNMDWTPDGRSIVFWA------GGKLNRIDSDGSN 332



 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 81/211 (38%), Gaps = 24/211 (11%)

Query: 216 EPRF---SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--RFSSNGK 270
            PRF   SP+  +V + +       R+Y    R   AP+ +       +     FS +G 
Sbjct: 365 MPRFGQLSPDGTQVVFESLG-----RLYTKSARGRDAPRPLTGAAEGTIEGFLAFSRDGS 419

Query: 271 RALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG----- 324
           R       DE +  I + D        +T+        ++SPD   I +E    G     
Sbjct: 420 RIAYVEWTDEDLGRIITADANGQNPRAITSEPGHYGDLTWSPDGRHIAYEKRGGGFLTSP 479

Query: 325 ----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  +Y++ SNG +  R+S+       +P +    + I  T  SG+   +     DG
Sbjct: 480 AYSETTGIYMIPSNGGEPMRVSRSG----SNPQFGSDPERIYMTTGSGDGLQLVSADLDG 535

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             +R +++ +       SP GR++ F +  +
Sbjct: 536 EDQRTIIKGALPSDFRVSPDGRTVAFRQNYE 566



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 96/279 (34%), Gaps = 57/279 (20%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP----------KRIGNFRSMILAP 263
              P  SP+  ++A+   D +D  ++++ D                 +       +    
Sbjct: 248 AVRPTPSPDGTEMAFVRRD-KDTSQLWVKDLATGAERMIYDALDLDLQETWAVYGVYPNM 306

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN------------TLFINISA---- 307
            ++ +G+  +          +  +D   +    +                 I +S     
Sbjct: 307 DWTPDGRSIVFWA----GGKLNRIDSDGSNFAEIPFSIDDTRGIADAPHPAIEVSPDRFT 362

Query: 308 -------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDP-VWSPQG 358
                    SPD +Q+VFES      +LY   + G D  R ++   E +      +S  G
Sbjct: 363 TTMPRFGQLSPDGTQVVFES----LGRLYTKSARGRDAPRPLTGAAEGTIEGFLAFSRDG 418

Query: 359 DLIAFTKFSGEKF-AIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             IA+ +++ E    I     +G   R +  E  +    TWSP GR + + ++  G   S
Sbjct: 419 SRIAYVEWTDEDLGRIITADANGQNPRAITSEPGHYGDLTWSPDGRHIAYEKRGGGFLTS 478

Query: 417 -------KLYSIDLNGRNETLI----NTPAYASDPQWVG 444
                   +Y I  NG     +    + P + SDP+ + 
Sbjct: 479 PAYSETTGIYMIPSNGGEPMRVSRSGSNPQFGSDPERIY 517



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 10/111 (9%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-P 395
           +Q RI  D E ++ D   SP G  IAF         I  M   G   R + +    +  P
Sbjct: 41  EQVRIQTD-EGTWMDVDVSPDGSTIAFNLLGD----IYTMPIAGGTPRRIADGLAWEVQP 95

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
            +SP G  + F+  + G  G  ++ ++++G ++  +   ++   + P W  
Sbjct: 96  RFSPDGTKIAFTSDRGG--GDNIWVMNVDGSDKRQVTKESFRLLNQPYWSP 144


>gi|260061328|ref|YP_003194408.1| WD40-like beta Propeller protein [Robiginitalea biformata HTCC2501]
 gi|88785460|gb|EAR16629.1| WD40-like Beta Propeller protein [Robiginitalea biformata HTCC2501]
          Length = 368

 Score =  139 bits (351), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 53/302 (17%), Positives = 118/302 (39%), Gaps = 55/302 (18%)

Query: 171 GDFNSR-ILFVSESVVSGIIKNSLCVMDR----DGANIRYLTPSRDQILFEPRFSPNQQK 225
             F++R ++F S     G+  + + +MD     +G+    ++    +      F P+ + 
Sbjct: 65  WSFDNRQLIFQSNYEKWGVECDQMFLMDAGETFNGSVPPMVSTGMGRTTCG-YFMPDNEH 123

Query: 226 VAYATYDDEDI--------------------LRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           + Y +    D                       +++ D +      ++ +          
Sbjct: 124 ILYGSTHLRDPECPEVPLRENGKYVWPVYDSFDIFVADLQ-GNIVDQLTDEPGYDAEATV 182

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S  G R + +  +   +++Y+++L  +   ++T+ L  +  A +SPD +QI+F + R   
Sbjct: 183 SPQGDRIVFTSDRSGDLELYTMNLDGSDVRQITDELGYDGGAFFSPDGTQIIFRASRPET 242

Query: 326 --------------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
                                +L++  ++GSD ++++    A++  P + P GD I F+ 
Sbjct: 243 EAEIAEYKDLLSRGLVQPTEMELFICNADGSDLRQLTFLGNANW-SPFFHPDGDKILFSS 301

Query: 366 F----SGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKK--DGDTGSKL 418
                 G  F + ++  DG+    +       A P +SP G+ L FS  +   G   + L
Sbjct: 302 NFESEGGFPFNLYLIGTDGTGLERVTHGQTFDAFPVFSPDGKYLAFSSNRNNGGTRDTNL 361

Query: 419 YS 420
           + 
Sbjct: 362 FI 363



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 61/170 (35%), Gaps = 32/170 (18%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGK----EQLYVMQSN---GSDQKRISQD 344
            +  ++T     N  A +S D+ Q++F+S+ E      +Q+++M +          +   
Sbjct: 49  KSIRQVTFG-GDNAEAYWSFDNRQLIFQSNYEKWGVECDQMFLMDAGETFNGSVPPMVST 107

Query: 345 KEASYFDPVWSPQGDLIAFTKFS---------------------GEKFAIGVMKKDGSQE 383
                    + P  + I +                          + F I V    G+  
Sbjct: 108 GMGRTTCGYFMPDNEHILYGSTHLRDPECPEVPLRENGKYVWPVYDSFDIFVADLQGNIV 167

Query: 384 RLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             L +        T SP G  ++F+  + GD   +LY+++L+G +   I 
Sbjct: 168 DQLTDEPGYDAEATVSPQGDRIVFTSDRSGD--LELYTMNLDGSDVRQIT 215



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           +  R++   + +  +       GD   +ILF S     G    +L ++  DG  +  +T 
Sbjct: 273 SDLRQLT-FLGNANWSPFFHPDGD---KILFSSNFESEGGFPFNLYLIGTDGTGLERVTH 328

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILR 238
            +      P FSP+ + +A+++  +    R
Sbjct: 329 GQ-TFDAFPVFSPDGKYLAFSSNRNNGGTR 357


>gi|268316197|ref|YP_003289916.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Rhodothermus marinus DSM 4252]
 gi|262333731|gb|ACY47528.1| peptidase S9B dipeptidylpeptidase IV domain protein [Rhodothermus
           marinus DSM 4252]
          Length = 1028

 Score =  139 bits (350), Expect = 8e-31,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 98/259 (37%), Gaps = 32/259 (12%)

Query: 179 FVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEP--------RFSPNQQKVAYA 229
           +V+      +    L V D   G  +R L+ S     F+          +SP+ Q+ A+ 
Sbjct: 308 YVAFLSERDLFTIDLFVADAETGKVLRRLSSSASDPHFDAIRFINSSGSWSPDGQRFAFI 367

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           T+   +   + + + R  +  +RI       I    +S +G+    S       D+Y +D
Sbjct: 368 TFAQGNN-EIAIWNLRKGKLERRIAVEGVGAIHNLAWSPDGRTIAFSGLSGGISDLYLLD 426

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----------GKEQLYVMQSNGSD 337
           L++N   +LT+  + ++  ++SPD   I F SDR            G E+L ++      
Sbjct: 427 LETNQVRKLTDDRYADLQPAWSPDGRTIAFVSDRGPDGTDFEILRYGHERLALLDLETGK 486

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAP 395
            + +   +     +P +SP G  + F         I  M  +      +   +       
Sbjct: 487 VRVLRPFRNGQQINPQFSPDGRSLYFISNHDGFKDIYRMDLNTGAVYRITRLQTGVSGIT 546

Query: 396 TWSP-------SGRSLIFS 407
           + SP       +GR  +FS
Sbjct: 547 SISPAMSVAAQNGRM-MFS 564



 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 54/255 (21%), Positives = 98/255 (38%), Gaps = 28/255 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS---------M 259
              +I   P  SP+ + VA+ +  D   + +++ D    +  +R+ +  S         +
Sbjct: 292 DAGEINLAPALSPDGRYVAFLSERDLFTIDLFVADAETGKVLRRLSSSASDPHFDAIRFI 351

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIV 317
             +  +S +G+R           +I   +L+    ER      +    + ++SPD   I 
Sbjct: 352 NSSGSWSPDGQRFAFITFAQGNNEIAIWNLRKGKLERRIAVEGVGAIHNLAWSPDGRTIA 411

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--------- 368
           F     G   LY++    +  ++++ D+ A    P WSP G  IAF    G         
Sbjct: 412 FSGLSGGISDLYLLDLETNQVRKLTDDRYADL-QPAWSPDGRTIAFVSDRGPDGTDFEIL 470

Query: 369 --EKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + ++  +  + R+L    +     P +SP GRSL F    DG     +Y +DLN
Sbjct: 471 RYGHERLALLDLETGKVRVLRPFRNGQQINPQFSPDGRSLYFISNHDG--FKDIYRMDLN 528

Query: 425 -GRNETLINTPAYAS 438
            G    +       S
Sbjct: 529 TGAVYRITRLQTGVS 543


>gi|284040960|ref|YP_003390890.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
 gi|283820253|gb|ADB42091.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
          Length = 667

 Score =  139 bits (350), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 65/346 (18%), Positives = 135/346 (39%), Gaps = 62/346 (17%)

Query: 159 SDDIY--QSITGEKGDFNSRIL---FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           S DIY  QS++  +   + + +     +         + L ++  DG     LT + +  
Sbjct: 34  SSDIYRLQSLSDPQISPDGKWVTYGLSTVDTTKDKRNSDLWMVSWDGKETVQLTNTPEG- 92

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
               RFSP+ + +++ +           +  R     K++ + ++ +    +S +GK+  
Sbjct: 93  ESRARFSPDGKYISFVSARQGATKGQIWLMDRRGGEAKKLTDLKTDLEEYVWSPDGKKIA 152

Query: 274 ISVQKD-------------------------------EAMDIYSVDLQSNATERLTNTLF 302
           + ++                                  ++ +Y  D+ S   + LT   +
Sbjct: 153 MVLRDPDYADSAKTKVRKPYVLDRYHFKADVKGYLEKGSVHLYVYDVASKKLDTLTTGNY 212

Query: 303 INISASYSPDSSQIVFES------DREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWS 355
              S ++SPD SQ+ F S      DR     +YV+ +  G+  K+++     S  +P WS
Sbjct: 213 DETSPTWSPDGSQLAFVSNRTEDPDRNQNTDIYVIDAKKGATMKQLTT-WPGSDNNPEWS 271

Query: 356 PQGDLIAFTKFS-GEKF------AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIF 406
           P G  IA+T+ +    F       + V+ +DG +  LL +  D  ++ P W+  G+++  
Sbjct: 272 PDGKRIAYTRSTASGNFLMYDQPVLAVISRDGGEPTLLSKALDRPVRNPRWAKDGQTIGV 331

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPA------YASDPQWVGFM 446
             + D  T    Y+  L+G+   + +           +   W+  M
Sbjct: 332 LVQDDRQTYVGQYT--LDGKLAKVASGNRVFTELEPVASGSWLTLM 375



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 71/209 (33%), Gaps = 18/209 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-----VYLMDTRID 247
           L V D     +  LT   +     P +SP+  ++A+ +   ED  R     +Y++D +  
Sbjct: 194 LYVYDVASKKLDTLTTG-NYDETSPTWSPDGSQLAFVSNRTEDPDRNQNTDIYVIDAKKG 252

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQ-------KDEAMDIYSVDLQSNATERLTNT 300
              K++  +      P +S +GKR   +           +   +  +         L+  
Sbjct: 253 ATMKQLTTWPGSDNNPEWSPDGKRIAYTRSTASGNFLMYDQPVLAVISRDGGEPTLLSKA 312

Query: 301 LFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           L   + +  ++ D   I      + +  +     +G   K  S ++  +  +PV S  G 
Sbjct: 313 LDRPVRNPRWAKDGQTIGVLVQDDRQTYVGQYTLDGKLAKVASGNRVFTELEPVAS--GS 370

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +           +  +  +    R L  
Sbjct: 371 WLTLMSDPQTPGELYAI--ESGAPRRLTH 397



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 77/233 (33%), Gaps = 34/233 (14%)

Query: 126 VEFRLWDVKDRK--QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           V   ++DV  +K   +    +  +  +W                   G   S++ FVS  
Sbjct: 192 VHLYVYDVASKKLDTLTTGNYDETSPTW----------------SPDG---SQLAFVSNR 232

Query: 184 V--VSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                      + V+D   GA ++ LT         P +SP+ +++AY          +Y
Sbjct: 233 TEDPDRNQNTDIYVIDAKKGATMKQLTTW-PGSDNNPEWSPDGKRIAYTRSTASGNFLMY 291

Query: 241 LMDT-----RIDRAPKRIGN-FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                    R    P  +       +  PR++ +G+   + VQ D    +    L     
Sbjct: 292 DQPVLAVISRDGGEPTLLSKALDRPVRNPRWAKDGQTIGVLVQDDRQTYVGQYTLDGK-L 350

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            ++ +   +          S +   SD +   +LY +       +R++   +A
Sbjct: 351 AKVASGNRVFTELEPVASGSWLTLMSDPQTPGELYAI--ESGAPRRLTHVHDA 401


>gi|127510948|ref|YP_001092145.1| amidohydrolase [Shewanella loihica PV-4]
 gi|126636243|gb|ABO21886.1| amidohydrolase [Shewanella loihica PV-4]
          Length = 1067

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 91/246 (36%), Gaps = 34/246 (13%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P ++ +  K A   +      +  L   +ID             +    S +GK+ +  +
Sbjct: 26  PTWAAD--KDAPPAWQVNAPAKAPLEQVKIDVT-------EGTWMNVSVSPDGKQIVFDL 76

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D    IY + ++    + L   +   +   YSPD   I F SD +G + ++VM ++G+
Sbjct: 77  LGD----IYQMPIEGGEAKPLAQGIAWQMQPVYSPDGKYIAFTSDEDGGDNIWVMNADGT 132

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIA----FT-KFSGEKFAIGVMKKDGSQERLLVEDSN 391
           D + ++++       P WSP    +     FT   S     + +    G     L E  N
Sbjct: 133 DPRPVTKETFRLLNSPAWSPDSQYLIGRKHFTGSRSLGAGEVWLYHVAGGTGVKLTERPN 192

Query: 392 LQ----APTWSPSGRSLIFSRK--------KDGDTGSKLYSI----DLNGRNETLINTPA 435
            Q     P +SP GR + FS+            D+   +Y I       G  E L+    
Sbjct: 193 EQKDLGEPAYSPDGRYVYFSQDATPGKTFHYSKDSVKGIYKIKRYDTQTGDIEVLVEGTG 252

Query: 436 YASDPQ 441
            A  P 
Sbjct: 253 GAIRPT 258



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 23/202 (11%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQ 277
           SP+  KV Y      + L    +    +    R+ +    +  L P++S +GK+ + +  
Sbjct: 378 SPDGDKVVY------EALGKLWVKRLPEGKVSRLTDLDDQVRELYPQWSRDGKKIVFTTW 431

Query: 278 KDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQ 327
            D+    +  ++ +   ++ LT      +  ++SPD   +V+   + G            
Sbjct: 432 DDDQQGSVRVINARGGRSKTLTQEPGKYVEPTFSPDGELVVYRKIKGGYITPRTWSQEPG 491

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           LYV+   G + ++I+ D     F P +  + D + F    GE   +  +   G Q+R+  
Sbjct: 492 LYVVDIKGKESRKITPDG----FQPQFGAESDRVYFMDH-GETPQLASINLHGFQKRVHY 546

Query: 388 EDSNLQAPTWSPSGRSLIFSRK 409
              +      SP G+ L F+ +
Sbjct: 547 TSKHATEFRVSPDGKQLAFAER 568



 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 90/255 (35%), Gaps = 27/255 (10%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +      +   +   +  M  +G   + L         +P +SP+ + +A+ 
Sbjct: 57  EGTWMNVSVSPDGKQIVFDLLGDIYQMPIEGGEAKPLAQG-IAWQMQPVYSPDGKYIAFT 115

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           + +D       +     D  P     FR +  +P +S + +  +     +  +   A ++
Sbjct: 116 SDEDGGDNIWVMNADGTDPRPVTKETFRLLN-SPAWSPDSQYLIGRKHFTGSRSLGAGEV 174

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDRE-------------GKEQL 328
           +   +      +LT            +YSPD   + F  D               G  ++
Sbjct: 175 WLYHVAGGTGVKLTERPNEQKDLGEPAYSPDGRYVYFSQDATPGKTFHYSKDSVKGIYKI 234

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   D + +  +       P  SP G  +A+ K  G +  + ++     ++  L +
Sbjct: 235 KRYDTQTGDIEVLV-EGTGGAIRPTPSPDGTKLAYIKRDGFQSTLYLLDLKSGKKTKLYD 293

Query: 389 --DSNLQAPTWSPSG 401
             D ++Q  TW+  G
Sbjct: 294 KLDRDMQE-TWAIHG 307



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 104/314 (33%), Gaps = 59/314 (18%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVA----------- 227
             +    +    + +    G     LT  P+  + L EP +SP+ + V            
Sbjct: 162 HFTGSRSLGAGEVWLYHVAGGTGVKLTERPNEQKDLGEPAYSPDGRYVYFSQDATPGKTF 221

Query: 228 -YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y+    + I ++   DT+     + +       + P  S +G +     +      +Y 
Sbjct: 222 HYSKDSVKGIYKIKRYDTQTGD-IEVLVEGTGGAIRPTPSPDGTKLAYIKRDGFQSTLYL 280

Query: 287 VDLQSNATERLTNTLFINIS-----------ASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +DL+S    +L + L  ++             S++ ++ ++VF +      ++  +    
Sbjct: 281 LDLKSGKKTKLYDKLDRDMQETWAIHGVYPTMSWTANNEELVFWA----GGKINRLDIES 336

Query: 336 SDQK----------------RISQDKEASYFD------PVWSPQGDLIAFTKFSGEKFAI 373
              K                R  Q+ +   FD         SP GD + +         +
Sbjct: 337 KSAKEIPFKVKTELAVQPSVRFKQNLDQDSFDVKMLRMAQVSPDGDKVVYEALG----KL 392

Query: 374 GVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            V +    +   L    +      P WS  G+ ++F+   D   GS        GR++TL
Sbjct: 393 WVKRLPEGKVSRLTDLDDQVRELYPQWSRDGKKIVFTTWDDDQQGSVRVINARGGRSKTL 452

Query: 431 INTPAYASDPQWVG 444
              P    +P +  
Sbjct: 453 TQEPGKYVEPTFSP 466



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 103/324 (31%), Gaps = 70/324 (21%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATY 231
            I F S+          + VM+ DG + R +T    ++L  P +SP+ Q +     +   
Sbjct: 111 YIAFTSDEDGGDN----IWVMNADGTDPRPVTKETFRLLNSPAWSPDSQYLIGRKHFTGS 166

Query: 232 DDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALIS----------VQKD 279
                  V+L         K     N +  +  P +S +G+    S            KD
Sbjct: 167 RSLGAGEVWLYHVAGGTGVKLTERPNEQKDLGEPAYSPDGRYVYFSQDATPGKTFHYSKD 226

Query: 280 ---EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                  I   D Q+   E L       I  + SPD +++ +      +  LY++     
Sbjct: 227 SVKGIYKIKRYDTQTGDIEVLVEGTGGAIRPTPSPDGTKLAYIKRDGFQSTLYLLDLKSG 286

Query: 337 DQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + ++          +      Y    W+   + + F  ++G K  I  +  +    + +
Sbjct: 287 KKTKLYDKLDRDMQETWAIHGVYPTMSWTANNEELVF--WAGGK--INRLDIESKSAKEI 342

Query: 387 ---VEDSNLQAPT---------------------WSPSGRSLIFSRKKDGDTGSKLYSID 422
              V+      P+                      SP G  +++      +   KL+   
Sbjct: 343 PFKVKTELAVQPSVRFKQNLDQDSFDVKMLRMAQVSPDGDKVVY------EALGKLWVKR 396

Query: 423 L-NGRNETLINTPAYASD--PQWV 443
           L  G+   L +      +  PQW 
Sbjct: 397 LPEGKVSRLTDLDDQVRELYPQWS 420



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 78/193 (40%), Gaps = 22/193 (11%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQI 316
           M+   + S +G + +          ++   L      RLT+       +   +S D  +I
Sbjct: 371 MLRMAQVSPDGDKVVYEA----LGKLWVKRLPEGKVSRLTDLDDQVRELYPQWSRDGKKI 426

Query: 317 VFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---- 371
           VF + D + +  + V+ + G   K ++Q+    Y +P +SP G+L+ + K  G       
Sbjct: 427 VFTTWDDDQQGSVRVINARGGRSKTLTQE-PGKYVEPTFSPDGELVVYRKIKGGYITPRT 485

Query: 372 -----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 + V+   G + R +  D     P +      + F    D     +L SI+L+G 
Sbjct: 486 WSQEPGLYVVDIKGKESRKITPDGFQ--PQFGAESDRVYFM---DHGETPQLASINLHGF 540

Query: 427 NETLINTPAYASD 439
            + +  T  +A++
Sbjct: 541 QKRVHYTSKHATE 553



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 92/258 (35%), Gaps = 68/258 (26%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  +      + S+ V++  G   + LT    + + EP FSP+ + V Y           
Sbjct: 426 IVFTTWDDDQQGSVRVINARGGRSKTLTQEPGKYV-EPTFSPDGELVVY----------- 473

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
                      ++I   +   + PR +S             +   +Y VD++   + ++T
Sbjct: 474 -----------RKI---KGGYITPRTWS-------------QEPGLYVVDIKGKESRKIT 506

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              F      +  +S ++ F  D     QL  +  +G  QKR+    + +  +   SP G
Sbjct: 507 PDGF---QPQFGAESDRVYFM-DHGETPQLASINLHGF-QKRVHYTSKHA-TEFRVSPDG 560

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------------TWSPSGRSLIF 406
             +AF     E+F + V       E + +       P            +W+     L +
Sbjct: 561 KQLAFA----ERFKVWVTPFAKHGETIEIGPKADNLPVTQLSVRAGESISWNGDSDQLYW 616

Query: 407 SRKKDGDTGSKLYSIDLN 424
           +       G +LY +D++
Sbjct: 617 T------LGPELYQMDVD 628


>gi|91204490|emb|CAJ70990.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1003

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 66/307 (21%), Positives = 113/307 (36%), Gaps = 63/307 (20%)

Query: 199 DGANI-RYLTPSRDQILFEPR-----FSPNQQKVAYATYDDED--ILRVYLMDTRIDRAP 250
           DGA   ++L  +R  I    R     FS +   + + +  + D    ++Y++D       
Sbjct: 29  DGAKEEQFLKNTRQLIYQGKRSGEGYFSEDGNALIFQSEREPDNPFFQIYILDLETGD-T 87

Query: 251 KRIGNFRSMILAPRFSSNGKRALI----------------------------SVQKDEAM 282
            R+                   L                             S   DE  
Sbjct: 88  NRVSPGTGKTTCSFIRPGSNEVLFASTHLDPEATAKQKAEFDIRASGENKRFSWDYDEHY 147

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE---------------- 326
           DI+S     +  +R+T  L  +   +YSPD S+IVF S R+                   
Sbjct: 148 DIFSAHRDGSNPKRMTEALGYDAEGAYSPDGSKIVFCSLRDAYPIEHLSAGDKKRFETDP 207

Query: 327 ----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDG 380
               ++Y+M ++GS Q R++  +      P +SP G  I +  F  +G    +  M  DG
Sbjct: 208 SYFGEIYIMNADGSGQTRLTH-QPGYDGGPFFSPDGKRIIWRHFKENGLLADVYTMNLDG 266

Query: 381 SQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE--TLINTPAYA 437
           S +R L +  ++  AP + PS   +IF   K G    +L+ +D+ G+ E   +  T  + 
Sbjct: 267 SDKRRLTDFGSMSWAPYYHPSNTYIIFHSNKYGFANCELFIVDVYGKKEPVRVTFTDGFD 326

Query: 438 SDPQWVG 444
             P +  
Sbjct: 327 GLPVFSP 333



 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 92/241 (38%), Gaps = 31/241 (12%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           + +  F+ R S   ++ ++   +  DI   +    R    PKR+           +S +G
Sbjct: 123 KQKAEFDIRASGENKRFSWDYDEHYDIFSAH----RDGSNPKRMTEALGYDAEGAYSPDG 178

Query: 270 KRALISVQKDEAM--------------------DIYSVDLQSNATERLTNTLFINISASY 309
            + +    +D                       +IY ++   +   RLT+    +    +
Sbjct: 179 SKIVFCSLRDAYPIEHLSAGDKKRFETDPSYFGEIYIMNADGSGQTRLTHQPGYDGGPFF 238

Query: 310 SPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SPD  +I++    +      +Y M  +GSD++R++     S+  P + P    I F    
Sbjct: 239 SPDGKRIIWRHFKENGLLADVYTMNLDGSDKRRLTDFGSMSW-APYYHPSNTYIIFHSNK 297

Query: 368 GE--KFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  + ++   G +E  R+   D     P +SP G+ L+++  +     S+L+  D 
Sbjct: 298 YGFANCELFIVDVYGKKEPVRVTFTDGFDGLPVFSPDGKKLVWTSNRTPQKNSQLFIADW 357

Query: 424 N 424
           N
Sbjct: 358 N 358



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 84/202 (41%), Gaps = 27/202 (13%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------------ 231
              +    RDG+N + +T +      E  +SP+  K+ + +                   
Sbjct: 146 HYDIFSAHRDGSNPKRMTEAL-GYDAEGAYSPDGSKIVFCSLRDAYPIEHLSAGDKKRFE 204

Query: 232 -DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVD 288
            D      +Y+M+        R+ +       P FS +GKR +    K+     D+Y+++
Sbjct: 205 TDPSYFGEIYIMNADGSGQT-RLTHQPGYDGGPFFSPDGKRIIWRHFKENGLLADVYTMN 263

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNG-SDQKRISQDK 345
           L  +   RLT+   ++ +  Y P ++ I+F S++ G    +L+++   G  +  R++   
Sbjct: 264 LDGSDKRRLTDFGSMSWAPYYHPSNTYIIFHSNKYGFANCELFIVDVYGKKEPVRVTF-T 322

Query: 346 EASYFDPVWSPQGDLIAFTKFS 367
           +     PV+SP G  + +T   
Sbjct: 323 DGFDGLPVFSPDGKKLVWTSNR 344



 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 84/233 (36%), Gaps = 56/233 (24%)

Query: 265 FSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES- 320
           FS +G   +   ++   +    IY +DL++  T R++        +   P S++++F S 
Sbjct: 55  FSEDGNALIFQSEREPDNPFFQIYILDLETGDTNRVSPGTGKTTCSFIRPGSNEVLFAST 114

Query: 321 ---------------------------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                                      D +    ++    +GS+ KR++ +      +  
Sbjct: 115 HLDPEATAKQKAEFDIRASGENKRFSWDYDEHYDIFSAHRDGSNPKRMT-EALGYDAEGA 173

Query: 354 WSPQGDLIAFTKFSG------------EKF--------AIGVMKKDGSQERLLVED-SNL 392
           +SP G  I F                 ++F         I +M  DGS +  L       
Sbjct: 174 YSPDGSKIVFCSLRDAYPIEHLSAGDKKRFETDPSYFGEIYIMNADGSGQTRLTHQPGYD 233

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
             P +SP G+ +I+   K+    + +Y+++L+G ++  +          W  +
Sbjct: 234 GGPFFSPDGKRIIWRHFKENGLLADVYTMNLDGSDKRRLT---DFGSMSWAPY 283



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 65/152 (42%), Gaps = 6/152 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +M+ DG+    LT  +      P FSP+ +++ +  + +  +L             +
Sbjct: 212 EIYIMNADGSGQTRLTH-QPGYDGGPFFSPDGKRIIWRHFKENGLLADVYTMNLDGSDKR 270

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMD--IYSVDLQSNA-TERLTNTLFINISAS 308
           R+ +F SM  AP +  +    +    K    +  ++ VD+       R+T T   +    
Sbjct: 271 RLTDFGSMSWAPYYHPSNTYIIFHSNKYGFANCELFIVDVYGKKEPVRVTFTDGFDGLPV 330

Query: 309 YSPDSSQIVFESDR--EGKEQLYVMQSNGSDQ 338
           +SPD  ++V+ S+R  +   QL++   N  + 
Sbjct: 331 FSPDGKKLVWTSNRTPQKNSQLFIADWNHEEA 362



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 20/61 (32%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S    +  S   G     L ++D  G          D     P FSP+ +K+ + +    
Sbjct: 287 SNTYIIFHSNKYGFANCELFIVDVYGKKEPVRVTFTDGFDGLPVFSPDGKKLVWTSNRTP 346

Query: 235 D 235
            
Sbjct: 347 Q 347


>gi|83816446|ref|YP_446482.1| hypothetical protein SRU_2383 [Salinibacter ruber DSM 13855]
 gi|83757840|gb|ABC45953.1| hypothetical protein SRU_2383 [Salinibacter ruber DSM 13855]
          Length = 1065

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/240 (23%), Positives = 99/240 (41%), Gaps = 31/240 (12%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS---------MIL 261
           +Q+   P  SP+ + VA+ +  +     +++ D       + +   RS         +  
Sbjct: 329 NQLNISPAVSPDGRYVAFISRRNLFNTNLFVADAETGEIVQELEGTRSNPHFDALRFINS 388

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIV 317
           A  +S +G+R       D   +I + ++Q+      T T   N+ A    ++SPD   I 
Sbjct: 389 AGAWSPDGRRFAFITFADGRNEINTFNVQTGEIR--TRTAVENVGAIHNLAWSPDGQSIA 446

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---FSGEKFA-- 372
           F     G   LYV   +  + ++++ D+ A+   P WSP G+ +AFT      G  F   
Sbjct: 447 FSGLEGGLSDLYVYDLDQKNVRQLTNDRYAAL-QPTWSPDGETLAFTTDRGRDGTNFETL 505

Query: 373 ------IGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 IG++     + R +          P +SP GRS+ F   +DG     +Y  DL+
Sbjct: 506 EYGEERIGLIDVASGEIRTIRPFSTGMQHNPQFSPDGRSIYFVADQDG--FKDVYRYDLD 563



 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 88/215 (40%), Gaps = 24/215 (11%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATER-L--TNT-------LF 302
           G    + ++P  S +G+      +++    +++  D ++    + L  T +        F
Sbjct: 326 GADNQLNISPAVSPDGRYVAFISRRNLFNTNLFVADAETGEIVQELEGTRSNPHFDALRF 385

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLI 361
           IN + ++SPD  +  F +  +G+ ++        + + R + +   +  +  WSP G  I
Sbjct: 386 INSAGAWSPDGRRFAFITFADGRNEINTFNVQTGEIRTRTAVENVGAIHNLAWSPDGQSI 445

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGS---- 416
           AF+   G    + V   D    R L  D      PTWSP G +L F+  +  D  +    
Sbjct: 446 AFSGLEGGLSDLYVYDLDQKNVRQLTNDRYAALQPTWSPDGETLAFTTDRGRDGTNFETL 505

Query: 417 -----KLYSIDL-NGRNETLIN-TPAYASDPQWVG 444
                ++  ID+ +G   T+   +     +PQ+  
Sbjct: 506 EYGEERIGLIDVASGEIRTIRPFSTGMQHNPQFSP 540



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 86/231 (37%), Gaps = 22/231 (9%)

Query: 179 FVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEP--------RFSPNQQKVAYA 229
           +V+      +   +L V D   G  ++ L  +R    F+          +SP+ ++ A+ 
Sbjct: 343 YVAFISRRNLFNTNLFVADAETGEIVQELEGTRSNPHFDALRFINSAGAWSPDGRRFAFI 402

Query: 230 TY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           T+ D  + +  + + T   R    + N    I    +S +G+    S  +    D+Y  D
Sbjct: 403 TFADGRNEINTFNVQTGEIRTRTAVENV-GAIHNLAWSPDGQSIAFSGLEGGLSDLYVYD 461

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----------GKEQLYVMQSNGSD 337
           L      +LTN  +  +  ++SPD   + F +DR            G+E++ ++     +
Sbjct: 462 LDQKNVRQLTNDRYAALQPTWSPDGETLAFTTDRGRDGTNFETLEYGEERIGLIDVASGE 521

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            + I         +P +SP G  I F         +     D      + E
Sbjct: 522 IRTIRPFSTGMQHNPQFSPDGRSIYFVADQDGFKDVYRYDLDEEATYRVTE 572



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 93/259 (35%), Gaps = 35/259 (13%)

Query: 161 DIYQSI--TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP---------- 208
           +I Q +  T     F++     S    S   +    +   DG N                
Sbjct: 366 EIVQELEGTRSNPHFDALRFINSAGAWSPDGRRFAFITFADGRNEINTFNVQTGEIRTRT 425

Query: 209 --SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    +SP+ Q +A++  +   +  +Y+ D    +  +++ N R   L P +S
Sbjct: 426 AVENVGAIHNLAWSPDGQSIAFSGLE-GGLSDLYVYDLD-QKNVRQLTNDRYAALQPTWS 483

Query: 267 SNGKRALISVQKD-----------EAMDIYSVDLQSNATERL-TNTLFINISASYSPDSS 314
            +G+    +  +                I  +D+ S     +   +  +  +  +SPD  
Sbjct: 484 PDGETLAFTTDRGRDGTNFETLEYGEERIGLIDVASGEIRTIRPFSTGMQHNPQFSPDGR 543

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP------QGDLIAFTKFSG 368
            I F +D++G + +Y    +     R+++ K         SP      +   + F+ FS 
Sbjct: 544 SIYFVADQDGFKDVYRYDLDEEATYRVTELKTGVSGITALSPALSVARRSGRMMFSVFSN 603

Query: 369 EKFAI-GVMKKDGSQERLL 386
             ++I G+  ++   ER+ 
Sbjct: 604 GGYSIVGLSPEETKGERMT 622


>gi|327538740|gb|EGF25390.1| peptidase M28 [Rhodopirellula baltica WH47]
          Length = 1074

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 77/315 (24%), Positives = 132/315 (41%), Gaps = 54/315 (17%)

Query: 163 YQSITGEKGDFN---SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           ++     +G F+   +R++F SE   S      + V D +  +I+ ++P   +       
Sbjct: 79  FEGRRAGEGYFSADGTRMVFQSERDPSNPF-YQIYVSDLETGDIQRVSPGFGKTTCG-WI 136

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            PN +KV +A+             T  D   +R+           F ++G+    S   D
Sbjct: 137 HPNGEKVLFAS-------------THADANSERLQKEEL-----DFRASGESRRYSWDYD 178

Query: 280 EAMDIYSVDLQ------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ------ 327
              ++Y+ +L       +     LT+ +  +  ASYSPD  QIVF S+R    +      
Sbjct: 179 PNYELYAAELDQIEPGTTKGLTALTSAMGYDAEASYSPDGKQIVFASNRAAYSRELTERE 238

Query: 328 -------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFA 372
                        LY+M ++GS+ KR++ +       P +SP G  I + +F  +G    
Sbjct: 239 QEQFERDPAFMIDLYIMNADGSNVKRLTNE-PGYDGGPFFSPDGQRICWRRFAPNGATAE 297

Query: 373 IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE--T 429
           I  MK DGS  + L E ++   AP + PSG  L+F+  K G    +LY +  +G  E   
Sbjct: 298 IFTMKTDGSDVQRLTEINAMSWAPFYHPSGEFLVFTTNKHGFANFELYLVRADGEGEPVR 357

Query: 430 LINTPAYASDPQWVG 444
           L  T  +   P ++ 
Sbjct: 358 LTTTEGFDGLPVFLP 372



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 94/253 (37%), Gaps = 38/253 (15%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-----TPSRDQI 213
           +D   + +  E+ DF +       S         L   + D              S    
Sbjct: 150 ADANSERLQKEELDFRASGESRRYS-WDYDPNYELYAAELDQIEPGTTKGLTALTSAMGY 208

Query: 214 LFEPRFSPNQQKVAYAT------------------YDDEDILRVYLMDTRIDRAPKRIGN 255
             E  +SP+ +++ +A+                   D   ++ +Y+M+       KR+ N
Sbjct: 209 DAEASYSPDGKQIVFASNRAAYSRELTEREQEQFERDPAFMIDLYIMNAD-GSNVKRLTN 267

Query: 256 FRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                  P FS +G+R             +I+++    +  +RLT    ++ +  Y P  
Sbjct: 268 EPGYDGGPFFSPDGQRICWRRFAPNGATAEIFTMKTDGSDVQRLTEINAMSWAPFYHPSG 327

Query: 314 SQIVFESDREG--KEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             +VF +++ G    +LY+++++G  +  R++   E     PV+ P G+ +++T      
Sbjct: 328 EFLVFTTNKHGFANFELYLVRADGEGEPVRLTT-TEGFDGLPVFLPNGNQLSWTTTR--- 383

Query: 371 FAIGVMKKDGSQE 383
               V+  DG   
Sbjct: 384 ----VVDSDGKVV 392



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 70/186 (37%), Gaps = 23/186 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +M+ DG+N++ LT         P FSP+ Q++ +  +                   +
Sbjct: 251 DLYIMNADGSNVKRLTN-EPGYDGGPFFSPDGQRICWRRFAPNGATAEIFTMKTDGSDVQ 309

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQS-NATERLTNTLFINISAS 308
           R+    +M  AP +  +G+  + +  K      ++Y V         RLT T   +    
Sbjct: 310 RLTEINAMSWAPFYHPSGEFLVFTTNKHGFANFELYLVRADGEGEPVRLTTTEGFDGLPV 369

Query: 309 YSPDSSQIVFESDR-----------EGKE-----QLYVMQSNGSDQKR---ISQDKEASY 349
           + P+ +Q+ + + R           +G+      Q+Y+   +    +R   +++  +   
Sbjct: 370 FLPNGNQLSWTTTRVVDSDGKVVLEDGEPKKSTSQIYLADFDVETARRRLGLTESSDNDS 429

Query: 350 FDPVWS 355
            D   S
Sbjct: 430 TDEDAS 435


>gi|171909807|ref|ZP_02925277.1| probable TolB protein [Verrucomicrobium spinosum DSM 4136]
          Length = 1009

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 55/308 (17%), Positives = 115/308 (37%), Gaps = 46/308 (14%)

Query: 163 YQSITGEKGDF--NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           ++     +G F  +   +        G     + +MD +  +   ++P   +        
Sbjct: 57  FEGKRSGEGYFNADGSKMIFQSEREPGNPFYQIYLMDLETGDQERISPGSGKTTCA-WIH 115

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   + +A+   +   +        +R   R+                     S   D+
Sbjct: 116 PDNDHILFASTHLDPESKAKQDAEYKERESSRVRR------------------YSWDYDQ 157

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--------------- 325
             D++   L+  + +++T     +   + SPD  ++VF S+R                  
Sbjct: 158 RYDLFLYSLKDKSLKQITREEGYDAEGAISPDGKRVVFASNRAAYSEPLSPADTERLKID 217

Query: 326 ----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKD 379
                ++Y M  +G+D KR++         P +S  G  I + +F+  G+   I  M  D
Sbjct: 218 KQYFMEIYTMNVDGTDVKRLTT-TPGYDGGPFFSHDGSKICWRRFNEKGDIAEIYTMNAD 276

Query: 380 GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE--TLINTPAY 436
           GS ++ + +   +  AP + PSG  LIF+   +G    +LY++D  G++E   +  T  +
Sbjct: 277 GSDQKQITKLGAMSWAPYFHPSGDYLIFTNNVNGFANFELYAVDAAGKHEPVRITTTDGF 336

Query: 437 ASDPQWVG 444
              P +  
Sbjct: 337 DGLPVFSP 344



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 51/199 (25%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDRE-GKE--QLYVMQSNGSDQKRISQDKEAS 348
               +LT     +    ++ D S+++F+S+RE G    Q+Y+M     DQ+RIS      
Sbjct: 50  TNIRQLTFEGKRSGEGYFNADGSKMIFQSEREPGNPFYQIYLMDLETGDQERISP-GSGK 108

Query: 349 YFDPVWSPQGDLIAFTKFS----------------------------GEKFAIGVMKKDG 380
                  P  D I F                                 +++ + +     
Sbjct: 109 TTCAWIHPDNDHILFASTHLDPESKAKQDAEYKERESSRVRRYSWDYDQRYDLFLYSLKD 168

Query: 381 SQERLLV-EDSNLQAPTWSPSGRSLIFSRKK-----------------DGDTGSKLYSID 422
              + +  E+        SP G+ ++F+  +                 D     ++Y+++
Sbjct: 169 KSLKQITREEGYDAEGAISPDGKRVVFASNRAAYSEPLSPADTERLKIDKQYFMEIYTMN 228

Query: 423 LNGRN-ETLINTPAYASDP 440
           ++G + + L  TP Y   P
Sbjct: 229 VDGTDVKRLTTTPGYDGGP 247



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 31/87 (35%), Gaps = 5/87 (5%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
                GD+      +  + V+G     L  +D  G +      + D     P FSP+ +K
Sbjct: 294 YFHPSGDY-----LIFTNNVNGFANFELYAVDAAGKHEPVRITTTDGFDGLPVFSPDGKK 348

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKR 252
           +++ +           +    D A ++
Sbjct: 349 LSWTSGRTSGGASQIFLADWNDAAARK 375


>gi|116626608|ref|YP_828764.1| WD40 domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229770|gb|ABJ88479.1| WD40 domain protein beta Propeller [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 638

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 91/252 (36%), Gaps = 29/252 (11%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
             ++K+A A    +       +          +         P ++ +G   + + +++ 
Sbjct: 46  HTRRKIALARVYPQPGQLGLFVAASDGSDEHPLLASADTDYDPAWAPDGGSIVFTSERNG 105

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQK 339
           + D++ V+   +  ++LT     +  A++S DS Q+ F S R G    L+ M       +
Sbjct: 106 SADLFRVNPDGSGLKQLTADPAYDDQATFSSDSKQLAFVSTRGGGTANLWTMDLVTGRAR 165

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-------------AIGVMKKDGSQERLL 386
            ++       F P WSP G  IAF+                     I V++ DGS  + +
Sbjct: 166 ALTS-GPGGDFRPSWSPDGKWIAFSSGRDNPVPFASGRWERLQLSDIYVIRPDGSGLKKI 224

Query: 387 VEDSNLQ-APTWSPSGRS-LIFS-----------RKKDGDTGSKLYSIDLNGRNETLINT 433
            +  N   +P W       + +               D    ++L SID      T +NT
Sbjct: 225 TKSGNFCGSPKWMGDSSHVIAYCMTAEQTLANRRASPDPGNDTRLVSIDTGTAASTELNT 284

Query: 434 -PAYASDPQWVG 444
            P    +P W+ 
Sbjct: 285 GPGVKINPSWLP 296



 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 92/262 (35%), Gaps = 37/262 (14%)

Query: 217 PRFSPNQQKVAYAT--YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           P FSP+ +++   +          + +       +     +    +L   +S +G+R + 
Sbjct: 371 PAFSPSGRELVTNSPPSATPRGSSISVTALETGISKVVYEDKNRNVLVGGWSPDGRRIIF 430

Query: 275 SV-------------------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           ++                   + +    +  V+        LT     N   S+SPD  +
Sbjct: 431 AIGEFAAFFDGFHSRFLKVGDRAETGARLAIVNADGTGLTELTAEPGNNAFPSFSPDGKR 490

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            V+ +  E    L +M       K +++        P+WSP+GDLI F++     + I  
Sbjct: 491 FVYRTFTEDGYGLRIMNLETKTGKILTR---QYDNFPLWSPRGDLITFSRQIEGAYEIYT 547

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG-----------DTGSKLYSIDL 423
           +K DGS  + L     N     WSP G  ++F+  + G               +++ +  
Sbjct: 548 IKPDGSSLKRLTFTKGNDAHMAWSPDGEYIVFTSSRMGFKDEVAYTDAPQPYGEIFVMRY 607

Query: 424 NGRNETLINTPAY-ASDPQWVG 444
           +G     +    +    P W  
Sbjct: 608 DGTGVEQLTDNQWEEGTPAWQP 629



 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 55/301 (18%), Positives = 106/301 (35%), Gaps = 36/301 (11%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++R       V     +  L V   DG++   L  S D   ++P ++P+   + + +  +
Sbjct: 46  HTRRKIALARVYPQPGQLGLFVAASDGSDEHPLLASAD-TDYDPAWAPDGGSIVFTSERN 104

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSN 292
                  +         K++    +      FSS+ K+      +     +++++DL + 
Sbjct: 105 GSADLFRVNPDGSG--LKQLTADPAYDDQATFSSDSKQLAFVSTRGGGTANLWTMDLVTG 162

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDRE-------GKEQ------LYVMQSNGSDQK 339
               LT+    +   S+SPD   I F S R+       G+ +      +YV++ +GS  K
Sbjct: 163 RARALTSGPGGDFRPSWSPDGKWIAFSSGRDNPVPFASGRWERLQLSDIYVIRPDGSGLK 222

Query: 340 RISQDKEASYFDPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLL------------ 386
           +I++        P W       IA+   + +  A      D   +  L            
Sbjct: 223 KITKSGN-FCGSPKWMGDSSHVIAYCMTAEQTLANRRASPDPGNDTRLVSIDTGTAASTE 281

Query: 387 --VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                     P+W P G    + RK   D G  +Y           I   +++ D + V 
Sbjct: 282 LNTGPGVKINPSWLP-GNETGYIRKDTADPG--IYYSSGRRGPAGQIRGASWSPDGKLVV 338

Query: 445 F 445
           F
Sbjct: 339 F 339



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/198 (25%), Positives = 90/198 (45%), Gaps = 24/198 (12%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY- 231
           F+SR L V +   +G     L +++ DG  +  LT       F P FSP+ ++  Y T+ 
Sbjct: 442 FHSRFLKVGDRAETGA---RLAIVNADGTGLTELTAEPGNNAF-PSFSPDGKRFVYRTFT 497

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           +D   LR+  ++T+  +   R          P +S  G     S Q + A +IY++    
Sbjct: 498 EDGYGLRIMNLETKTGKILTR-----QYDNFPLWSPRGDLITFSRQIEGAYEIYTIKPDG 552

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQ 338
           ++ +RLT T   +   ++SPD   IVF S R G               +++VM+ +G+  
Sbjct: 553 SSLKRLTFTKGNDAHMAWSPDGEYIVFTSSRMGFKDEVAYTDAPQPYGEIFVMRYDGTGV 612

Query: 339 KRISQDKEASYFDPVWSP 356
           ++++ D +     P W P
Sbjct: 613 EQLT-DNQWEEGTPAWQP 629



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 63/413 (15%), Positives = 113/413 (27%), Gaps = 135/413 (32%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +D  Y        D + ++ FVS          +L  MD      R LT       F P 
Sbjct: 124 ADPAYDDQATFSSD-SKQLAFVSTRGGGTA---NLWTMDLVTGRARALTSGPGG-DFRPS 178

Query: 219 FSPNQQKVAYAT-------YDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSS 267
           +SP+ + +A+++       +      R+ L D  +        K+I    +   +P++  
Sbjct: 179 WSPDGKWIAFSSGRDNPVPFASGRWERLQLSDIYVIRPDGSGLKKITKSGNFCGSPKWMG 238

Query: 268 NGKR-ALISVQKDEAMDIYSVDLQSNATERL----------------------------- 297
           +        +  ++ +             RL                             
Sbjct: 239 DSSHVIAYCMTAEQTLANRRASPDPGNDTRLVSIDTGTAASTELNTGPGVKINPSWLPGN 298

Query: 298 --------TNTLFINIS------------ASYSPDSSQIVFE------------------ 319
                   T    I  S            AS+SPD   +VF                   
Sbjct: 299 ETGYIRKDTADPGIYYSSGRRGPAGQIRGASWSPDGKLVVFCRRANTPRPAGGAKRTFSR 358

Query: 320 -----------------SDRE-----------GKEQLYVMQSNGSDQKRISQDKEASYFD 351
                            S RE               + V        K + +DK  +   
Sbjct: 359 NSKYELSLTGILPAFSPSGRELVTNSPPSATPRGSSISVTALETGISKVVYEDKNRNVLV 418

Query: 352 PVWSPQGDLIAFT-------------------KFSGEKFAIGVMKKDGSQERLLV-EDSN 391
             WSP G  I F                      +     + ++  DG+    L  E  N
Sbjct: 419 GGWSPDGRRIIFAIGEFAAFFDGFHSRFLKVGDRAETGARLAIVNADGTGLTELTAEPGN 478

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              P++SP G+  ++    +   G ++  ++L  +   ++ T  Y + P W  
Sbjct: 479 NAFPSFSPDGKRFVYRTFTEDGYGLRI--MNLETKTGKIL-TRQYDNFPLWSP 528


>gi|307295800|ref|ZP_07575633.1| amidohydrolase [Sphingobium chlorophenolicum L-1]
 gi|306878456|gb|EFN09677.1| amidohydrolase [Sphingobium chlorophenolicum L-1]
          Length = 992

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 82/215 (38%), Gaps = 8/215 (3%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G          +        SP+ + +A       D+     +        +RI ++ + 
Sbjct: 37  GGETPIAFDVHEGTSMAVSVSPDGKWLAV------DLQGSLWIIPAKGGKARRITDYFND 90

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              P +S +G R      +D   D++++    +   +LT   + +   ++SPD   I F 
Sbjct: 91  ARQPVWSPDGSRLAYFAYRDGGYDLWTIRPDGSDMRKLTGGAWDDREPTWSPDGRTIAFS 150

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SDR G   ++ +       K+ S +       P WSP G  IA+    G K A+      
Sbjct: 151 SDRSGNYDIWTLDVASGAVKQRSSNPREDRM-PSWSPDGASIAYAGIDGGKTALYATSLA 209

Query: 380 GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD 413
             +E LL +    + AP++ P+G+     +   G 
Sbjct: 210 DGKESLLKQVAGRIDAPSYGPAGQLAYVVQDAKGS 244



 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 64/340 (18%), Positives = 125/340 (36%), Gaps = 37/340 (10%)

Query: 88  KQKITNPDSIPRFQ-DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS 146
            + ++  +++  F+  W   G   +  G++      RL       D     + +   +  
Sbjct: 250 GKTVSGTENVFPFRISWGKSGYHYVSDGKIRYRSGPRL----ATVDFAATLEAVKASYPR 305

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           +   W   A   +  I        G   SRI FV+           L +M   G     L
Sbjct: 306 AKRDWDSTAPRKALGIVHPTISPDG---SRIAFVAL--------GDLYLMSSKGGTPENL 354

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T     +  +P +SP+ Q +AY +     + ++++ D +  +  +++ +  +  L   +S
Sbjct: 355 TKD-AALDADPAWSPDGQSIAYTSDKGGGLPQLWIRDLKSGKD-RKLTSIDTQPLGAAWS 412

Query: 267 SNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF------ 318
            +G+R        +     +  VD+ +    RL ++L    S ++SPD   +        
Sbjct: 413 PDGRRIAFLDVDGRWGVAGVCVVDVATGKITRLQSSLGQPGSPTWSPDGKYVAIALSYKY 472

Query: 319 -ESDREGKEQLYVMQSNGSDQK--RISQDKEASY----FDPVWSPQGDLIAFTKFSGEKF 371
             S REG  Q+YV+ ++G  +   +I Q    +       P WSP G  +A         
Sbjct: 473 SNSFREGTNQVYVIPADGKGEPFWQIPQANAGTDTRGGGGPAWSPDGMKMA--AIYEGLL 530

Query: 372 AIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            I  +  DG                PTW+   R++++   
Sbjct: 531 KIWPVSADGKPMGPPRSYTSEIAHFPTWTGDSRTILYQSS 570



 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 67/358 (18%), Positives = 118/358 (32%), Gaps = 81/358 (22%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           A  I+D    +         SR+ + +           L  +  DG+++R LT       
Sbjct: 81  ARRITDYFNDARQPVWSPDGSRLAYFAYRDGG----YDLWTIRPDGSDMRKLT-GGAWDD 135

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            EP +SP+ + +A+++ D      ++ +D       +R  N R     P +S +G     
Sbjct: 136 REPTWSPDGRTIAFSS-DRSGNYDIWTLDVASGAVKQRSSNPRE-DRMPSWSPDGASIAY 193

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +        +Y+  L       L        + SY P         D +G      ++ +
Sbjct: 194 AGIDGGKTALYATSLADGKESLLKQVAGRIDAPSYGPAGQLAYVVQDAKGSH----LEVD 249

Query: 335 GSDQK--------RISQDKEASYF------------------------------------ 350
           G            RIS  K   ++                                    
Sbjct: 250 GKTVSGTENVFPFRISWGKSGYHYVSDGKIRYRSGPRLATVDFAATLEAVKASYPRAKRD 309

Query: 351 -------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PT 396
                         P  SP G  IAF         + +M   G     L +D+ L A P 
Sbjct: 310 WDSTAPRKALGIVHPTISPDGSRIAFVALGD----LYLMSSKGGTPENLTKDAALDADPA 365

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN------TPAYASDPQWVGFMD 447
           WSP G+S+ ++  K G    +L+  DL +G++  L +        A++ D + + F+D
Sbjct: 366 WSPDGQSIAYTSDKGGGL-PQLWIRDLKSGKDRKLTSIDTQPLGAAWSPDGRRIAFLD 422



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 62/316 (19%), Positives = 102/316 (32%), Gaps = 69/316 (21%)

Query: 188 IIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                +  +D   GA  +  +  R+     P +SP+   +AYA  D           +  
Sbjct: 154 SGNYDIWTLDVASGAVKQRSSNPRE--DRMPSWSPDGASIAYAGIDGGKT--ALYATSLA 209

Query: 247 DRAPKRIGNFRSMILAPRFSS------------------NGKRAL-------ISVQKDEA 281
           D     +      I AP +                    +GK            +   ++
Sbjct: 210 DGKESLLKQVAGRIDAPSYGPAGQLAYVVQDAKGSHLEVDGKTVSGTENVFPFRISWGKS 269

Query: 282 MDIYSVD--LQSNATERLTNTLFINI---------------------------SASYSPD 312
              Y  D  ++  +  RL    F                                + SPD
Sbjct: 270 GYHYVSDGKIRYRSGPRLATVDFAATLEAVKASYPRAKRDWDSTAPRKALGIVHPTISPD 329

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF- 371
            S+I F +       LY+M S G   + +++D  A   DP WSP G  IA+T   G    
Sbjct: 330 GSRIAFVA----LGDLYLMSSKGGTPENLTKDA-ALDADPAWSPDGQSIAYTSDKGGGLP 384

Query: 372 AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDL-NGRNE 428
            + +      ++R L   D+      WSP GR + F    DG  G + +  +D+  G+  
Sbjct: 385 QLWIRDLKSGKDRKLTSIDTQPLGAAWSPDGRRIAFL-DVDGRWGVAGVCVVDVATGKIT 443

Query: 429 TLINTPAYASDPQWVG 444
            L ++      P W  
Sbjct: 444 RLQSSLGQPGSPTWSP 459



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 49/156 (31%), Gaps = 44/156 (28%)

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDL------------------------------ 360
           +   G +        E +      SP G                                
Sbjct: 33  LPPPGGETPIAFDVHEGTSMAVSVSPDGKWLAVDLQGSLWIIPAKGGKARRITDYFNDAR 92

Query: 361 ----------IAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRK 409
                     +A+  +    + +  ++ DGS  R L     + + PTWSP GR++ FS  
Sbjct: 93  QPVWSPDGSRLAYFAYRDGGYDLWTIRPDGSDMRKLTGGAWDDREPTWSPDGRTIAFSSD 152

Query: 410 KDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
           + G     ++++D+ +G  +   + P     P W  
Sbjct: 153 RSG--NYDIWTLDVASGAVKQRSSNPREDRMPSWSP 186


>gi|221632297|ref|YP_002521518.1| acyl-peptide hydrolase [Thermomicrobium roseum DSM 5159]
 gi|221156948|gb|ACM06075.1| acylamino-acid-releasing enzyme (ec) (acyl-peptide hydrolase) (aph)
           [Thermomicrobium roseum DSM 5159]
          Length = 657

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/336 (17%), Positives = 129/336 (38%), Gaps = 74/336 (22%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +  +  + +   ++++ +   DG+  R  T    +    PR+SP+ +++A+ +       
Sbjct: 31  VVTTMDLEADRYRSAIWLARTDGSPPRRFTSGTHR-DTMPRWSPSGEELAFLSDRTGS-- 87

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK------------------- 278
               +  R     +++ NF   +    +S +G+R  +  +                    
Sbjct: 88  DQLWVIPRNGGEARQLTNFVEPVTGFAWSPDGQRIAVVTRAQQAEGKVDPETDVVRLTRL 147

Query: 279 ------------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--- 323
                       +    I+ VDL++   ER T+  + +   ++SPD SQ+VF S+R    
Sbjct: 148 RYRFDGQRGFLHERRSHIWVVDLRTGTLERATDGDWDDDWPAWSPDGSQLVFTSNRTEER 207

Query: 324 ---GKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQGDLIA----FTKFSGEKFA 372
                 +L++++ + + +      ++    A++  P WSP G LIA    F  ++G    
Sbjct: 208 EWNAASELWLLRFDAAGRTVDLSCVTGGPSAAFGRPSWSPDGRLIAAVGHFESWAGSARH 267

Query: 373 --IGVMKKDGSQERLLVEDSNL----------QAPT-----WSPSGRSLIFSRKKDGDTG 415
             + VM  DG++   L  D +             P+     WSP GR +    +      
Sbjct: 268 KRLWVMTPDGNERWNLSADFDATLEDSLLTDAFGPSKPGLLWSPDGRWI--FTQVSEQGA 325

Query: 416 SKLYSIDLNG-------RNETLINTPAYASDPQWVG 444
            +LY   ++G            +   + ++D +W+ 
Sbjct: 326 VRLYRFPVSGGAPECIIGGARRVLDFSLSADGRWIA 361



 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 88/268 (32%), Gaps = 52/268 (19%)

Query: 212 QILFEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           Q+  + + +P+   VAY       + +       +       P+R  +       PR+S 
Sbjct: 14  QLASDAQIAPDASAVAYVVTTMDLEADRYRSAIWLARTDGSPPRRFTSGTHRDTMPRWSP 73

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV---------- 317
           +G+       +  +  ++ +        +LTN +      ++SPD  +I           
Sbjct: 74  SGEELAFLSDRTGSDQLWVIPRNGGEARQLTNFVEPVTGFAWSPDGQRIAVVTRAQQAEG 133

Query: 318 -----------------FESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                            F+  R      +  ++V+       +R + D +     P WSP
Sbjct: 134 KVDPETDVVRLTRLRYRFDGQRGFLHERRSHIWVVDLRTGTLERAT-DGDWDDDWPAWSP 192

Query: 357 QGDLIAFTKFSGEK------FAIGVMKKDGSQERL----LVEDSN--LQAPTWSPSGRSL 404
            G  + FT    E+        + +++ D +   +    +    +     P+WSP GR +
Sbjct: 193 DGSQLVFTSNRTEEREWNAASELWLLRFDAAGRTVDLSCVTGGPSAAFGRPSWSPDGRLI 252

Query: 405 I----FSRKKDGDTGSKLYSIDLNGRNE 428
                F          +L+ +  +G   
Sbjct: 253 AAVGHFESWAGSARHKRLWVMTPDGNER 280



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 77/248 (31%), Gaps = 32/248 (12%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R  F  +       ++ + V+D     +   T   D     P +SP+  ++ + +   E+
Sbjct: 148 RYRFDGQRGFLHERRSHIWVVDLRTGTLERATDG-DWDDDWPAWSPDGSQLVFTSNRTEE 206

Query: 236 ILR---VYLMDTRIDRAPKR-----IGNFRSMILA-PRFSSNGKRAL----ISVQKDEAM 282
                   L   R D A +      +    S     P +S +G+              A 
Sbjct: 207 REWNAASELWLLRFDAAGRTVDLSCVTGGPSAAFGRPSWSPDGRLIAAVGHFESWAGSAR 266

Query: 283 D--IYSVDLQSNATERLTNTLFINISAS--------------YSPDSSQIVFESDREGKE 326
              ++ +    N    L+      +  S              +SPD   I  +   +G  
Sbjct: 267 HKRLWVMTPDGNERWNLSADFDATLEDSLLTDAFGPSKPGLLWSPDGRWIFTQVSEQGAV 326

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKDGSQERL 385
           +LY    +G   + I         D   S  G  I A      +  ++ +M  DGS  R 
Sbjct: 327 RLYRFPVSGGAPECII-GGARRVLDFSLSADGRWIAAVIAGPVDPGSVWLMAADGSSSRC 385

Query: 386 LVEDSNLQ 393
           L + +   
Sbjct: 386 LADPNAAW 393


>gi|83814657|ref|YP_446340.1| MdsD protein, putative [Salinibacter ruber DSM 13855]
 gi|294508278|ref|YP_003572336.1| MdsD protein, [Salinibacter ruber M8]
 gi|83756051|gb|ABC44164.1| MdsD protein, putative [Salinibacter ruber DSM 13855]
 gi|294344606|emb|CBH25384.1| MdsD protein, putative [Salinibacter ruber M8]
          Length = 1092

 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 54/209 (25%), Positives = 79/209 (37%), Gaps = 21/209 (10%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           P    +    +  P    +G R   S Q D    +++V +   A ERLT          +
Sbjct: 33  PTSAQDADPFVRHPAVHPDGDRIAFSYQGD----LWTVPVDGGAPERLTIHEAYEGEPRW 88

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PD  +I F SDR G + LYVM + GS   R++           W+P G L+  T+ +  
Sbjct: 89  GPDGDRIAFTSDRFGNDDLYVMDAAGSTPTRLTHHSTGDAIGG-WTPTGKLLFTTRRTYA 147

Query: 370 K----FAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKD--------GDTGS 416
           +      I  +  DG    R L  D+   AP  SP GR + F R  +        G    
Sbjct: 148 QAEWSDEIYAVDGDGGTPDRRL--DAVGSAPRMSPDGRFIAFERGYNDITKKGYEGPADR 205

Query: 417 KLYSIDLNGRNETLINT-PAYASDPQWVG 444
            ++  D      T + T       P W G
Sbjct: 206 NVWVYDTENDTYTQVTTYAGNDHTPVWTG 234



 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 94/247 (38%), Gaps = 35/247 (14%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              D  +  P   P+  ++A++   D   + V         AP+R+    +    PR+  
Sbjct: 37  QDADPFVRHPAVHPDGDRIAFSYQGDLWTVPVD------GGAPERLTIHEAYEGEPRWGP 90

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----- 322
           +G R   +  +    D+Y +D   +   RLT+    +    ++P   +++F + R     
Sbjct: 91  DGDRIAFTSDRFGNDDLYVMDAAGSTPTRLTHHSTGDAIGGWTPTG-KLLFTTRRTYAQA 149

Query: 323 EGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGE----------KF 371
           E  +++Y +  +G    +R+     A    P  SP G  IAF +   +            
Sbjct: 150 EWSDEIYAVDGDGGTPDRRLDAVGSA----PRMSPDGRFIAFERGYNDITKKGYEGPADR 205

Query: 372 AIGVMKKDG-SQERLLVEDSNLQAPTWS-PSGRSLIFSRKKDGDTG-SKLYSID---LNG 425
            + V   +  +  ++     N   P W+ P  R+L++  ++ G     +L   D    +G
Sbjct: 206 NVWVYDTENDTYTQVTTYAGNDHTPVWTGP--RTLLYVSEQSGTYNVHRLALTDQGAADG 263

Query: 426 RNETLIN 432
             E +  
Sbjct: 264 APEAVTT 270



 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 102/280 (36%), Gaps = 42/280 (15%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  L  +  DG     LT   +    EPR+ P+  ++A+ +    +   +Y+MD    
Sbjct: 58  SYQGDLWTVPVDGGAPERLTI-HEAYEGEPRWGPDGDRIAFTSDRFGN-DDLYVMD-AAG 114

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALIS----VQKDEAMDIYSVDLQSNAT-ERLTNTLF 302
             P R+ +  +      ++  GK    +     Q + + +IY+VD        RL     
Sbjct: 115 STPTRLTHHSTGDAIGGWTPTGKLLFTTRRTYAQAEWSDEIYAVDGDGGTPDRRL---DA 171

Query: 303 INISASYSPDSSQIVFESDREGKE------------QLYVMQSNGSDQKRISQDKEASYF 350
           +  +   SPD   I F  +R   +             ++V  +      +++     +  
Sbjct: 172 VGSAPRMSPDGRFIAF--ERGYNDITKKGYEGPADRNVWVYDTENDTYTQVTTYA-GNDH 228

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKK------DGSQERLLV-EDSNLQAPTWSPSGRS 403
            PVW+     + +       + +  +        DG+ E +   +D ++++ + S  G  
Sbjct: 229 TPVWT-GPRTLLYVSEQSGTYNVHRLALTDQGAADGAPEAVTTFDDHDVRSLSASQDGSV 287

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETL-INTPAYAS-DPQ 441
           +   R+ D      +Y I+  G    L +  PA    DP 
Sbjct: 288 VAVQRQTD------IYLIENGGEPRPLDVTVPADYRFDPT 321



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 53/325 (16%), Positives = 99/325 (30%), Gaps = 40/325 (12%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V   +  + +     P + R   HT  D       G     +S ++F S+   +      
Sbjct: 345 VLRGEIFLMQNDPEEPRTTRLTDHTHRDR------GVAWMSDSTLVFSSDRGGNQYDLYR 398

Query: 193 LCVMD-------RDG-ANIRYLTPSRDQILFEPRFSPNQQKVAY-----ATYDDEDILRV 239
           L   D        D   +         +        P++  VA        Y    +L  
Sbjct: 399 LESADPEHPGDLYDALQHHVTQLTDTPEDERVLAMDPDRSHVALRRGAMTPYGAGQLLTA 458

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSN-ATERL 297
            + D  I+ A   +    +      +S +G     S    +   D+Y      +     +
Sbjct: 459 AVADGTIEDAT-VLAEGWNAPTDVAWSPDGDWLAYSQNNLNFNADVYVHAADGSTGPVNV 517

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEA----SYFDP 352
           +     +    +SPD S++ F SDR G +  ++ +     D ++  +D EA         
Sbjct: 518 SQHPKSDTEPVWSPDGSKLGFVSDRSGNDADIWFVWLEEEDWEKTKRDWEALEDEDESGA 577

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             S           +  +  I +       ER+         P  +  G +  F   +D 
Sbjct: 578 ERSED--------DAPPEVNIDLANIHDRLERVTALPGGEGDPVIAADGDTFYFVGGRDA 629

Query: 413 -----DTGSKLYSIDLNGRNETLIN 432
                D+   LY I  +G   T + 
Sbjct: 630 GPADYDSEVDLYRIQWDGSERTRVT 654



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 66/375 (17%), Positives = 127/375 (33%), Gaps = 56/375 (14%)

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
             G   +   D   + F     +    I  K +         +  T  +D Y  +T   G
Sbjct: 171 AVGSAPRMSPDGRFIAFE----RGYNDITKKGYEGPADRNVWVYDT-ENDTYTQVTTYAG 225

Query: 172 DFNS------RILFVSESVVSGIIKNSLCVMDR---DGANIRYLTPSRDQILFEPRFSPN 222
           + ++      R L            + L + D+   DGA    +T   D  +     S +
Sbjct: 226 NDHTPVWTGPRTLLYVSEQSGTYNVHRLALTDQGAADGA-PEAVTTFDDHDVRSLSASQD 284

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-------------RFSSNG 269
              VA      +    +YL++   +  P  +         P               S +G
Sbjct: 285 GSVVA-----VQRQTDIYLIENGGEPRPLDVTVPADYRFDPTEKMQMTDGLRDYAVSPDG 339

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QL 328
           ++  + ++    + +   D +   T RLT+    +   ++  D S +VF SDR G +  L
Sbjct: 340 EQVALVLR--GEIFLMQNDPEEPRTTRLTDHTHRDRGVAWMSD-STLVFSSDRGGNQYDL 396

Query: 329 YVMQSNGSDQKR---------ISQDKEASYFDPVWS--PQGDLIAFTKFS----GEKFAI 373
           Y ++S   +            ++Q  +    + V +  P    +A  + +    G    +
Sbjct: 397 YRLESADPEHPGDLYDALQHHVTQLTDTPEDERVLAMDPDRSHVALRRGAMTPYGAGQLL 456

Query: 374 GVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKK-DGDTGSKLYSIDLNGRNET 429
                DG+ E   V      APT   WSP G  L +S+   + +    +++ D +     
Sbjct: 457 TAAVADGTIEDATVLAEGWNAPTDVAWSPDGDWLAYSQNNLNFNADVYVHAADGSTGPVN 516

Query: 430 LINTPAYASDPQWVG 444
           +   P   ++P W  
Sbjct: 517 VSQHPKSDTEPVWSP 531



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 75/227 (33%), Gaps = 27/227 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++VA             + +   +    R+ +         + S+    + S  
Sbjct: 334 AVSPDGEQVALVL----RGEIFLMQNDPEEPRTTRLTDHTHRDRGVAWMSD-STLVFSSD 388

Query: 278 KDEA-MDIYSV------------DLQSNATERLTNTLFINISASYSPDSSQIVFES---D 321
           +     D+Y +            D   +   +LT+T       +  PD S +        
Sbjct: 389 RGGNQYDLYRLESADPEHPGDLYDALQHHVTQLTDTPEDERVLAMDPDRSHVALRRGAMT 448

Query: 322 REGKEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKK 378
             G  QL          +   +  +   +  D  WSP GD +A+++ +      + V   
Sbjct: 449 PYGAGQLLTAAVADGTIEDATVLAEGWNAPTDVAWSPDGDWLAYSQNNLNFNADVYVHAA 508

Query: 379 DG--SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           DG      +     +   P WSP G  L F   + G+  + ++ + L
Sbjct: 509 DGSTGPVNVSQHPKSDTEPVWSPDGSKLGFVSDRSGN-DADIWFVWL 554



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 58/200 (29%), Gaps = 49/200 (24%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+   +AY+  +      VY+        P  +         P +S +G +      
Sbjct: 482 AWSPDGDWLAYSQNNLNFNADVYVHAADGSTGPVNVSQHPKSDTEPVWSPDGSKLGFVSD 541

Query: 278 KDEA-MDIYSVDL-------------------QSNATE---------------------R 296
           +     DI+ V L                   +S A                       R
Sbjct: 542 RSGNDADIWFVWLEEEDWEKTKRDWEALEDEDESGAERSEDDAPPEVNIDLANIHDRLER 601

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKE-------QLYVMQSNGSDQKRISQDKEASY 349
           +T           + D     F   R+           LY +Q +GS++ R++ ++    
Sbjct: 602 VTALPGGEGDPVIAADGDTFYFVGGRDAGPADYDSEVDLYRIQWDGSERTRVT-ERNVGP 660

Query: 350 FDPVWSPQGDLIAFTKFSGE 369
            D   SP    I FT   G 
Sbjct: 661 SDVRLSPDDSQILFTHSGGR 680


>gi|119504089|ref|ZP_01626170.1| hypothetical protein MGP2080_10073 [marine gamma proteobacterium
           HTCC2080]
 gi|119460092|gb|EAW41186.1| hypothetical protein MGP2080_10073 [marine gamma proteobacterium
           HTCC2080]
          Length = 1101

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 50/201 (24%), Positives = 91/201 (45%), Gaps = 28/201 (13%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +G R +     D   D+YSV L   +   LT  +  N   ++SPD  +I F SDR+G
Sbjct: 53  VSPDGTRVIF----DMLGDLYSVPLSGGSVTALTEGIEWNFQPTFSPDGKRIAFVSDRDG 108

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF---AIGVMKKD 379
            + ++VM  +GS+  +++ +++ +  +P WSP    IA  K   SG       I +   +
Sbjct: 109 NDNIWVMDIDGSNVTQVTSERKHNLHNPAWSPDSQWIAVRKGTVSGRSIPSGEIWMYHVN 168

Query: 380 GSQERLLVEDSN-------LQAPTWSPSGRSLIFSRK--------KDGDTGSKLYSID-- 422
           G     +V++++       +  P +SP G  L +S+          + D+  ++++I   
Sbjct: 169 GGSGIEVVDNTDGTRAQKSIAEPAFSPDGDYLYYSQDTTSGWVWQYNKDSTGEIFAIRRL 228

Query: 423 --LNGRNETLINTPAYASDPQ 441
               G  +T+   P  A  P 
Sbjct: 229 DLTTGEIDTITGGPGGAVRPT 249



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 91/237 (38%), Gaps = 32/237 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  +V +      D+  V L       +   +         P FS +GKR      +D
Sbjct: 54  SPDGTRVIF--DMLGDLYSVPL----SGGSVTALTEGIEWNFQPTFSPDGKRIAFVSDRD 107

Query: 280 EAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF----ESDRE-GKEQLYVMQS 333
              +I+ +D+  +   ++T+    N+ + ++SPDS  I       S R     ++++   
Sbjct: 108 GNDNIWVMDIDGSNVTQVTSERKHNLHNPAWSPDSQWIAVRKGTVSGRSIPSGEIWMYHV 167

Query: 334 NGSDQKRISQDKEA-----SYFDPVWSPQGDLIAFTK-------------FSGEKFAIGV 375
           NG     +  + +      S  +P +SP GD + +++              +GE FAI  
Sbjct: 168 NGGSGIEVVDNTDGTRAQKSIAEPAFSPDGDYLYYSQDTTSGWVWQYNKDSTGEIFAIRR 227

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +     +   +         PT SP G  L F  K+  D  S +   DL    ET +
Sbjct: 228 LDLTTGEIDTITGGPGGAVRPTPSPDGSKLAFV-KRLPDFNSAIVIRDLTSGMETTV 283



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 81/244 (33%), Gaps = 41/244 (16%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY----ATY 231
           RI FVS+   +      + VMD DG+N+  +T  R   L  P +SP+ Q +A      + 
Sbjct: 99  RIAFVSDRDGNDN----IWVMDIDGSNVTQVTSERKHNLHNPAWSPDSQWIAVRKGTVSG 154

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRS-----MILAPRFSSNGKRALIS----------V 276
                  +++         + + N         I  P FS +G     S           
Sbjct: 155 RSIPSGEIWMYHVNGGSGIEVVDNTDGTRAQKSIAEPAFSPDGDYLYYSQDTTSGWVWQY 214

Query: 277 QKDEAMDIY---SVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQ 332
            KD   +I+    +DL +   + +T      +  + SPD S++ F     +    + +  
Sbjct: 215 NKDSTGEIFAIRRLDLTTGEIDTITGGPGGAVRPTPSPDGSKLAFVKRLPDFNSAIVIRD 274

Query: 333 SNGSDQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                +  +          +     +     W P G  + F         I  +  +   
Sbjct: 275 LTSGMETTVYDSLERDEQETAGSHGNTTAFEWLPNGRDLVFWTAG----RIHRLNTETGD 330

Query: 383 ERLL 386
            ++L
Sbjct: 331 TKIL 334



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 38/263 (14%)

Query: 199 DGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           DGA     LT  RD   + P  S + Q+V Y +++D+D+ RV ++  +     K +    
Sbjct: 392 DGAQKPARLTEQRDHFEYWPALSADGQQVVYTSWNDQDLGRVKVVSAK-GGPSKTLVKTP 450

Query: 258 SMILAPRFSSNGKRALISVQKDE---------AMDIYSVDLQSNATERLTNTLFINISAS 308
              + P+FS +G+  +                   IY V  +     ++++        +
Sbjct: 451 GHYVQPKFSPDGEMVVYRKTTGGYLLSPLWSVEPGIYLVKTEGGTPIKISSAGH---HPT 507

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +S D S+++F +  E   +L+ +   G D++ I+Q ++ + +    SP G+ +AFT    
Sbjct: 508 FSADGSRVLFTTRGEKGLELHSVDHMGLDKRVIAQGEKVTSY--AVSPDGNWLAFT---- 561

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT------------WSPSGRSLIFSRKKDGDTGS 416
           E F + VM    + + ++ + +    P             WS   ++L +S       G 
Sbjct: 562 EHFRVYVMPLTITGKPMVAQRAGGAVPVRGVSERAGEFLHWSADSQALHWS------NGP 615

Query: 417 KLYSIDLNGRNETLINTPAYASD 439
            L++ +L     +L      A D
Sbjct: 616 ALFTRNLTDAFTSLAPVDQEADD 638



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 85/254 (33%), Gaps = 40/254 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G ++  LT   +   F+P FSP+ +++A+ +  D +   +++MD       +
Sbjct: 67  DLYSVPLSGGSVTALTEGIE-WNFQPTFSPDGKRIAFVSDRDGN-DNIWVMDIDGSNVTQ 124

Query: 252 RIGNFRSMILAPRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATERL------TNT 300
                +  +  P +S + +        +S +   + +I+   +   +   +      T  
Sbjct: 125 VTSERKHNLHNPAWSPDSQWIAVRKGTVSGRSIPSGEIWMYHVNGGSGIEVVDNTDGTRA 184

Query: 301 LFINISASYSPDSSQIVFESDREGKE-------------QLYVMQSNGSDQKRISQDKEA 347
                  ++SPD   + +  D                   +  +     +   I+     
Sbjct: 185 QKSIAEPAFSPDGDYLYYSQDTTSGWVWQYNKDSTGEIFAIRRLDLTTGEIDTIT-GGPG 243

Query: 348 SYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVED------------SNLQA 394
               P  SP G  +AF K   +   AI +       E  + +              N  A
Sbjct: 244 GAVRPTPSPDGSKLAFVKRLPDFNSAIVIRDLTSGMETTVYDSLERDEQETAGSHGNTTA 303

Query: 395 PTWSPSGRSLIFSR 408
             W P+GR L+F  
Sbjct: 304 FEWLPNGRDLVFWT 317



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 88/241 (36%), Gaps = 24/241 (9%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNG 269
            ++L   + +P      + +      L    +     + P R+   R      P  S++G
Sbjct: 361 SKMLRWAQLTPAGNSAIFGSMGH---LYHSTIREDGAQKPARLTEQRDHFEYWPALSADG 417

Query: 270 KRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--- 325
           ++ + +   D+ +  +  V  +   ++ L  T    +   +SPD   +V+     G    
Sbjct: 418 QQVVYTSWNDQDLGRVKVVSAKGGPSKTLVKTPGHYVQPKFSPDGEMVVYRKTTGGYLLS 477

Query: 326 ------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                   +Y++++ G    +IS         P +S  G  + FT    +   +  +   
Sbjct: 478 PLWSVEPGIYLVKTEGGTPIKISSAG----HHPTFSADGSRVLFTTRGEKGLELHSVDHM 533

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           G  +R++ +   + +   SP G  L F+         ++Y + L    + ++   A  + 
Sbjct: 534 GLDKRVIAQGEKVTSYAVSPDGNWLAFTEH------FRVYVMPLTITGKPMVAQRAGGAV 587

Query: 440 P 440
           P
Sbjct: 588 P 588



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 97/275 (35%), Gaps = 44/275 (16%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF- 265
           T           + PN + + +  +    I R+          P ++   + +    RF 
Sbjct: 294 TAGSHGNTTAFEWLPNGRDLVF--WTAGRIHRLNTETGDTKILPIQLSVTKKVRDTVRFP 351

Query: 266 ---SSN---------------GKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINIS 306
              + +               G  A+              D       RLT         
Sbjct: 352 VEVAPDSVDSKMLRWAQLTPAGNSAIFGSMGHLYHSTIREDGA-QKPARLTEQRDHFEYW 410

Query: 307 ASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            + S D  Q+V+ S  +    ++ V+ + G   K + +     Y  P +SP G+++ + K
Sbjct: 411 PALSADGQQVVYTSWNDQDLGRVKVVSAKGGPSKTLVK-TPGHYVQPKFSPDGEMVVYRK 469

Query: 366 FSGE---------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            +G          +  I ++K +G     +    +   PT+S  G  ++F+ +  G+ G 
Sbjct: 470 TTGGYLLSPLWSVEPGIYLVKTEGGTPIKISSAGH--HPTFSADGSRVLFTTR--GEKGL 525

Query: 417 KLYSIDLNGRNETLINTP------AYASDPQWVGF 445
           +L+S+D  G ++ +I         A + D  W+ F
Sbjct: 526 ELHSVDHMGLDKRVIAQGEKVTSYAVSPDGNWLAF 560



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 15/124 (12%)

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V+   G  +    + +  ++     SP G  + F         +  +   G     L E 
Sbjct: 29  VLNPPGPWRDITIETETTTWSFVDVSPDGTRVIFDMLGD----LYSVPLSGGSVTALTEG 84

Query: 390 SNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT--------PAYASDP 440
                 PT+SP G+ + F   +DG     ++ +D++G N T + +        PA++ D 
Sbjct: 85  IEWNFQPTFSPDGKRIAFVSDRDG--NDNIWVMDIDGSNVTQVTSERKHNLHNPAWSPDS 142

Query: 441 QWVG 444
           QW+ 
Sbjct: 143 QWIA 146


>gi|310817396|ref|YP_003949754.1| amidohydrolase [Stigmatella aurantiaca DW4/3-1]
 gi|309390468|gb|ADO67927.1| Amidohydrolase [Stigmatella aurantiaca DW4/3-1]
          Length = 1093

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 25/206 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               ++   S  G   +  +  D    +Y++ +     + LT     ++   YSPD + I
Sbjct: 55  EGTWMSVDVSPKGDELVFDLLGD----LYTLPIAGGEAKALTTGAAWDMQPRYSPDGASI 110

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFSG-EKF 371
            F SDR G + L++M+ +GSD + ++Q+       P WSP    +     F+        
Sbjct: 111 AFTSDRGGGDNLWIMKRDGSDSRPVTQESFRLLNSPTWSPDSQYLVARKHFSSRRSLGAG 170

Query: 372 AIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLY 419
            + +  + G +   L E  N Q     P +SP GR L FS+          + D   ++Y
Sbjct: 171 EMWLYHRAGGEGVQLTERPNDQKDAGEPAFSPDGRFLYFSQDTTPGKVFEYNKDPNGQIY 230

Query: 420 SI---DLNGRN-ETLINTPAYASDPQ 441
            I   +L  +  E  I  P  +  P 
Sbjct: 231 VIQRLNLETKELEPFITGPGGSVRPT 256



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 93/234 (39%), Gaps = 30/234 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP   ++ +      D+L             K +    +  + PR+S +G     +  + 
Sbjct: 64  SPKGDELVF------DLLGDLYTLPIAGGEAKALTTGAAWDMQPRYSPDGASIAFTSDRG 117

Query: 280 EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVMQS 333
              +++ +    + +  +T   F +  S ++SPDS  +V    F S R  G  ++++   
Sbjct: 118 GGDNLWIMKRDGSDSRPVTQESFRLLNSPTWSPDSQYLVARKHFSSRRSLGAGEMWLYHR 177

Query: 334 NGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKF-------------SGEKFAIGVMKK 378
            G +  ++++         +P +SP G  + F++              +G+ + I  +  
Sbjct: 178 AGGEGVQLTERPNDQKDAGEPAFSPDGRFLYFSQDTTPGKVFEYNKDPNGQIYVIQRLNL 237

Query: 379 DGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +  + E  +        PT SP G+SL F R+  G   S L+S DL    E  +
Sbjct: 238 ETKELEPFITGPGGSVRPTPSPDGKSLAFVRRVRGK--SVLFSADLVSGAERPL 289



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 55/295 (18%), Positives = 102/295 (34%), Gaps = 40/295 (13%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + S  +      +   +   L  +   G   + LT        +PR+SP+   +A+ 
Sbjct: 55  EGTWMSVDVSPKGDELVFDLLGDLYTLPIAGGEAKALTTG-AAWDMQPRYSPDGASIAFT 113

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           +          +     D  P    +FR +  +P +S + +  +     S ++   A ++
Sbjct: 114 SDRGGGDNLWIMKRDGSDSRPVTQESFRLLN-SPTWSPDSQYLVARKHFSSRRSLGAGEM 172

Query: 285 YSVDLQSNATERLT---NTLFINISASYSPDSSQI----------VFESDREGKEQLYVM 331
           +          +LT   N        ++SPD   +          VFE +++   Q+YV+
Sbjct: 173 WLYHRAGGEGVQLTERPNDQKDAGEPAFSPDGRFLYFSQDTTPGKVFEYNKDPNGQIYVI 232

Query: 332 QSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           Q    + K +            P  SP G  +AF +    K  +         ER L + 
Sbjct: 233 QRLNLETKELEPFITGPGGSVRPTPSPDGKSLAFVRRVRGKSVLFSADLVSGAERPLFDG 292

Query: 390 ------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                           A  W+P  +SL+F  +       KL  ID+  +  T I 
Sbjct: 293 LDRDMQETWAIHGVYPAMAWTPDSKSLVFWAQ------GKLNRIDVASKRVTPIP 341



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/328 (15%), Positives = 102/328 (31%), Gaps = 60/328 (18%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQK 225
               D    +     S    +    + +  R G     LT  P+  +   EP FSP+ + 
Sbjct: 147 TWSPDSQYLVARKHFSSRRSLGAGEMWLYHRAGGEGVQLTERPNDQKDAGEPAFSPDGRF 206

Query: 226 VAYATYD------------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           + ++               +  I  +  ++         I      +  P  S +GK   
Sbjct: 207 LYFSQDTTPGKVFEYNKDPNGQIYVIQRLNLETKELEPFITGPGGSVR-PTPSPDGKSLA 265

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-----------ASYSPDSSQIVFESDR 322
              +      ++S DL S A   L + L  ++             +++PDS  +VF +  
Sbjct: 266 FVRRVRGKSVLFSADLVSGAERPLFDGLDRDMQETWAIHGVYPAMAWTPDSKSLVFWAQ- 324

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP---------------VW---SPQG 358
               +L  +         I      ++   A    P                W   SP+G
Sbjct: 325 ---GKLNRIDVASKRVTPIPFHVKGTRTLFARVHSPQAQAVVPERFPVKMLRWVQVSPKG 381

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGS 416
           D + +         +   +      R L + +      P++S  G+S++++   D   G+
Sbjct: 382 DRVVYQALG----HLYTRELPDGLPRRLTKQTEHFEMHPSFSRDGKSIVYTTWDDDKLGT 437

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVG 444
                   G  + +   P +  +P +  
Sbjct: 438 VRVVSAGGGEGKVVSAQPGFYLEPAFSP 465



 Score = 90.8 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 93/265 (35%), Gaps = 43/265 (16%)

Query: 218 RFSPNQQKVAYATYDD--------EDILRVYLMDTRIDRAPKRIGNFRSMILAP------ 263
            ++P+ + + +             + +  +            R+ + ++  + P      
Sbjct: 311 AWTPDSKSLVFWAQGKLNRIDVASKRVTPIPFHVKGTRTLFARVHSPQAQAVVPERFPVK 370

Query: 264 --RF---SSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIV 317
             R+   S  G R +          +Y+ +L      RLT  T    +  S+S D   IV
Sbjct: 371 MLRWVQVSPKGDRVVYQA----LGHLYTRELPDGLPRRLTKQTEHFEMHPSFSRDGKSIV 426

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-------- 369
           + +  + K     + S G  + ++   +   Y +P +SP G  I +    G         
Sbjct: 427 YTTWDDDKLGTVRVVSAGGGEGKVVSAQPGFYLEPAFSPDGRSIVYRASGGGYLLPGLYS 486

Query: 370 -KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG--SKLYSIDLNGR 426
               + V+ KDG   R L +D   + P +      + F   + G+     +L SI L+G 
Sbjct: 487 RDPGLYVVGKDGGTPRRLSKDG--EQPHFGAGSDRVYFLAVEGGEKEDKRELRSIGLDGT 544

Query: 427 NETLINTPAYAS------DPQWVGF 445
                 T A  S      D +WV F
Sbjct: 545 APRTHLTSAEVSTYRVSPDERWVAF 569



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 47/120 (39%), Gaps = 10/120 (8%)

Query: 329 YVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + + + G     +  D  E ++     SP+GD + F         +  +   G + + L 
Sbjct: 37  WNVNAPGFPSTEVPLDVTEGTWMSVDVSPKGDELVFDLLGD----LYTLPIAGGEAKALT 92

Query: 388 EDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
             +     P +SP G S+ F+  + G  G  L+ +  +G +   +   ++   + P W  
Sbjct: 93  TGAAWDMQPRYSPDGASIAFTSDRGG--GDNLWIMKRDGSDSRPVTQESFRLLNSPTWSP 150



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 68/244 (27%), Gaps = 63/244 (25%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  +        ++ V+   G   + ++  +     EP FSP+ + + Y           
Sbjct: 425 IVYTTWDDDKLGTVRVVSAGGGEGKVVSA-QPGFYLEPAFSPDGRSIVYR---------- 473

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                          +    +L   +S +               +Y V        RL+ 
Sbjct: 474 --------------ASGGGYLLPGLYSRD-------------PGLYVVGKDGGTPRRLSK 506

Query: 300 TLFINISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                    +   S ++ F +   G    K +L  +  +G+  +  +    A       S
Sbjct: 507 DG---EQPHFGAGSDRVYFLAVEGGEKEDKRELRSIGLDGTAPR--THLTSAEVSTYRVS 561

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT------------WSPSGRS 403
           P    +AF     E F   V       + ++    +   P             WS   + 
Sbjct: 562 PDERWVAF----QEVFNAYVAPLSRGGKTVVASKDSKALPVTRVSRDAGNFLHWSGDSKR 617

Query: 404 LIFS 407
           L ++
Sbjct: 618 LYWA 621


>gi|152998566|ref|YP_001364247.1| amidohydrolase [Shewanella baltica OS185]
 gi|151363184|gb|ABS06184.1| amidohydrolase [Shewanella baltica OS185]
          Length = 1062

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 25/199 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK  +  +  D    IY + +     + L   +   +   YSPD   I F SD +
Sbjct: 58  SVSPDGKHIVFDLLGD----IYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGD 113

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKK 378
           G + +++M ++GS+ + ++Q+       P WSP    +          S     + +   
Sbjct: 114 GGDNIWIMDADGSNPRTVTQETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHV 173

Query: 379 DGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLYSI----D 422
            G +   L E  N Q     P +SP GR + FS+            D+ + +Y I     
Sbjct: 174 AGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTLGKTFHYSKDSVNGIYKIKRYDT 233

Query: 423 LNGRNETLINTPAYASDPQ 441
             G  E LI     A  P 
Sbjct: 234 QTGDIEILIEGTGGAIRPT 252



 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 91/236 (38%), Gaps = 31/236 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + + +      DI ++ +         K +    +  + P +S +GK    +  
Sbjct: 58  SVSPDGKHIVF--DLLGDIYQIPV----TGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSD 111

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVM 331
            D   +I+ +D   +    +T   F +  S ++SPDS  +V    F + R  G  ++++ 
Sbjct: 112 GDGGDNIWIMDADGSNPRTVTQETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLY 171

Query: 332 QSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVM 376
              G +  ++++         +P +SP G  I F++                  + I   
Sbjct: 172 HVAGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTLGKTFHYSKDSVNGIYKIKRY 231

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
                   +L+E       PT SP G  L + ++   D  S LY +DL +G    L
Sbjct: 232 DTQTGDIEILIEGTGGAIRPTPSPDGTKLAYIKRD--DFNSSLYLLDLKSGETTKL 285



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 76/202 (37%), Gaps = 21/202 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQK 278
           SP+  KVA+     E + +++L      +  +       +  L P++S +GK  + +   
Sbjct: 372 SPDGSKVAF-----EALGKIWLKSLPDGKMSRLTELNNGIEELYPQWSRDGKNIVFTTWN 426

Query: 279 D-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQL 328
           D +   +  +  +    ++LT+     +  ++SPD   +V+     G            L
Sbjct: 427 DQDQGTVQVISAKGGKPKQLTSEPGKYVEPTFSPDGELVVYRKTHGGNLTPRTWSQEPGL 486

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLV 387
           Y +   G   K+IS D   + F        D + F      E   +  +  DG  +R+  
Sbjct: 487 YKVDIKGKQNKKISADGYQAQFG----ANADRVFFMNSSEDETPQLSSINLDGFDKRVHY 542

Query: 388 EDSNLQAPTWSPSGRSLIFSRK 409
              +      SP G  L F+ +
Sbjct: 543 SSKHATEFRVSPDGEQLAFAER 564



 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 75/458 (16%), Positives = 148/458 (32%), Gaps = 87/458 (18%)

Query: 37  KVATNSANYSPVSIAFT--------------KFVSIDELGGKVSEVVSKDLQRSDVFNLI 82
           ++        P++                   F S  + G  +  ++  D          
Sbjct: 76  QIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGDGGDNIW-IMDAD---------- 124

Query: 83  SQDSFKQKITNPD-SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
              S  + +T     +     W S  +Q LV  +     +     E  L+ V   +   G
Sbjct: 125 --GSNPRTVTQETFRLLNSPAW-SPDSQYLVARKHFTASRSLGAGEVWLYHVAGGE---G 178

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
            K    P   + +         + I   + D   +    S+  V+GI K  +   D    
Sbjct: 179 VKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTLGKTFHYSKDSVNGIYK--IKRYDTQTG 236

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---- 257
           +I  L       +  P  SP+  K+AY   DD +   +YL+D +     K  G       
Sbjct: 237 DIEILIEGTGGAI-RPTPSPDGTKLAYIKRDDFNS-SLYLLDLKSGETTKLFGELDRDMQ 294

Query: 258 ------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASY 309
                  +     ++ + K      +      I  +++ S     +  ++     +  S 
Sbjct: 295 ETWAIHGVYPTMAWTQDNKDIFFWAKG----KINRLNVASKTLTDIPFSVKTELAVQPSV 350

Query: 310 ---------------------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA- 347
                                SPD S++ FE+      ++++         R+++     
Sbjct: 351 RFKQDIDKDVFDVKMLRMAQVSPDGSKVAFEA----LGKIWLKSLPDGKMSRLTELNNGI 406

Query: 348 SYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
               P WS  G  I FT ++  ++  + V+   G + + L  E      PT+SP G  ++
Sbjct: 407 EELYPQWSRDGKNIVFTTWNDQDQGTVQVISAKGGKPKQLTSEPGKYVEPTFSPDGELVV 466

Query: 406 FSRKKDGDTGSK-------LYSIDLNGRNETLINTPAY 436
           + +   G+   +       LY +D+ G+    I+   Y
Sbjct: 467 YRKTHGGNLTPRTWSQEPGLYKVDIKGKQNKKISADGY 504



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 54/323 (16%), Positives = 103/323 (31%), Gaps = 51/323 (15%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQK 225
               D    +     +    +    + +    G     LT  P+  + L EP +SP+ + 
Sbjct: 143 AWSPDSQYLVARKHFTASRSLGAGEVWLYHVAGGEGVKLTERPNDQKDLGEPAYSPDGRY 202

Query: 226 VAYATYDD------------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           + ++  D               I ++   DT+       I      I  P  S +G +  
Sbjct: 203 IYFSQDDTLGKTFHYSKDSVNGIYKIKRYDTQTGDIEILIEGTGGAIR-PTPSPDGTKLA 261

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY---- 329
              + D    +Y +DL+S  T +L   L  ++  +++           ++ K+  +    
Sbjct: 262 YIKRDDFNSSLYLLDLKSGETTKLFGELDRDMQETWAIHGVYPTMAWTQDNKDIFFWAKG 321

Query: 330 -------------------VMQSNGSDQKRISQDKEASYFD------PVWSPQGDLIAFT 364
                                +       R  QD +   FD         SP G  +AF 
Sbjct: 322 KINRLNVASKTLTDIPFSVKTELAVQPSVRFKQDIDKDVFDVKMLRMAQVSPDGSKVAFE 381

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   I +      +   L E +N      P WS  G++++F+   D D G+     
Sbjct: 382 ALG----KIWLKSLPDGKMSRLTELNNGIEELYPQWSRDGKNIVFTTWNDQDQGTVQVIS 437

Query: 422 DLNGRNETLINTPAYASDPQWVG 444
              G+ + L + P    +P +  
Sbjct: 438 AKGGKPKQLTSEPGKYVEPTFSP 460



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 9/103 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRS 403
            E ++ +   SP G  I F         I  +   G + + L +    Q  P +SP G+ 
Sbjct: 50  NEGTWMNLSVSPDGKHIVFDLLGD----IYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKH 105

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
           + F+   DGD G  ++ +D +G N   +    +   + P W  
Sbjct: 106 IAFTS--DGDGGDNIWIMDADGSNPRTVTQETFRLLNSPAWSP 146


>gi|117918478|ref|YP_867670.1| amidohydrolase [Shewanella sp. ANA-3]
 gi|117610810|gb|ABK46264.1| amidohydrolase [Shewanella sp. ANA-3]
          Length = 1062

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 76/199 (38%), Gaps = 25/199 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK  +  +  D    IY + +     + L   +   +   YSPD   I F SD +
Sbjct: 58  SVSPDGKHLVFDLLGD----IYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDAD 113

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKK 378
           G + +++M ++GS+ + ++ +       P WSP  + +          S     + +   
Sbjct: 114 GGDNIWIMDADGSNPRTVTTETFRLLNSPAWSPDSEYLVGRKHFTASRSLGAGEVWLYHV 173

Query: 379 DGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLYSI----D 422
            G +   L E  N +     P +SP GR + FS+            D+ + +Y I     
Sbjct: 174 AGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRYDT 233

Query: 423 LNGRNETLINTPAYASDPQ 441
             G  E LI     A  P 
Sbjct: 234 QTGDIEILIEGTGGAIRPT 252



 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 92/236 (38%), Gaps = 31/236 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + + +      DI ++ +         K +    +  + P +S +GK    +  
Sbjct: 58  SVSPDGKHLVFDLL--GDIYQIPV----TGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSD 111

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVM 331
            D   +I+ +D   +    +T   F +  S ++SPDS  +V    F + R  G  ++++ 
Sbjct: 112 ADGGDNIWIMDADGSNPRTVTTETFRLLNSPAWSPDSEYLVGRKHFTASRSLGAGEVWLY 171

Query: 332 QSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVM 376
              G +  +++   + E    +P +SP G  I F++                  + I   
Sbjct: 172 HVAGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRY 231

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
                   +L+E       PT SP G  L + ++   D  S LY +DL +G    L
Sbjct: 232 DTQTGDIEILIEGTGGAIRPTPSPDGTKLAYIKRD--DFQSSLYLLDLKSGETTKL 285



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 86/254 (33%), Gaps = 25/254 (9%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +      +   +   +  +   G   + L         +P +SP+ + +A+ 
Sbjct: 51  EGTWMNISVSPDGKHLVFDLLGDIYQIPVTGGEAKPLAQG-IAWQMQPVYSPDGKHIAFT 109

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN-----GKRALISVQKDEAMDI 284
           + D +    +++MD               ++ +P +S +     G++   + +   A ++
Sbjct: 110 S-DADGGDNIWIMDADGSNPRTVTTETFRLLNSPAWSPDSEYLVGRKHFTASRSLGAGEV 168

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESD-------------REGKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 169 WLYHVAGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKI 228

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   D + I  +       P  SP G  +A+ K    + ++ ++     +   L  
Sbjct: 229 KRYDTQTGDIE-ILIEGTGGAIRPTPSPDGTKLAYIKRDDFQSSLYLLDLKSGETTKLYG 287

Query: 389 D-SNLQAPTWSPSG 401
           D       TW+  G
Sbjct: 288 DLERDMQETWAIHG 301



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 52/343 (15%), Positives = 99/343 (28%), Gaps = 91/343 (26%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATYDDEDILRVYLMDTRIDR 248
           + +MD DG+N R +T    ++L  P +SP+ + +     +          V+L       
Sbjct: 118 IWIMDADGSNPRTVTTETFRLLNSPAWSPDSEYLVGRKHFTASRSLGAGEVWLYHVAGGE 177

Query: 249 APKRIG--NFRSMILAPRFSSNGKRALISV-------------QKDEAMDIYSVDLQSNA 293
             K     N    +  P +S +G+    S                +    I   D Q+  
Sbjct: 178 GVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRYDTQTGD 237

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----------SQ 343
            E L       I  + SPD +++ +    + +  LY++     +  ++          + 
Sbjct: 238 IEILIEGTGGAIRPTPSPDGTKLAYIKRDDFQSSLYLLDLKSGETTKLYGDLERDMQETW 297

Query: 344 DKEASYFDPVWSPQGDLIAFTK------------------------------------FS 367
                Y    W+     I F                                        
Sbjct: 298 AIHGVYPTMAWTQDNKDIFFWAKGKINRLNVANKTVTNIPFSVKTQLDVQPSVRFKQDID 357

Query: 368 GEKFAIGV-----MKKDGSQE------------------RLLVEDSNLQA---PTWSPSG 401
            + F + +     +  DGS+                     L E  N      P WS  G
Sbjct: 358 KDVFDVKMLRMTQVSPDGSKVAFEALGKIWLKTLPDGKMTRLTELGNDIEELYPQWSRDG 417

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           ++++F+   D D G+        G+ + L        +P +  
Sbjct: 418 KNIVFTTWNDQDQGTVQVISAKGGKAKQLTTETGKYVEPTFSP 460



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 9/103 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRS 403
            E ++ +   SP G  + F         I  +   G + + L +    Q  P +SP G+ 
Sbjct: 50  TEGTWMNISVSPDGKHLVFDLLGD----IYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKH 105

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
           + F+   DG  G  ++ +D +G N   + T  +   + P W  
Sbjct: 106 IAFTSDADG--GDNIWIMDADGSNPRTVTTETFRLLNSPAWSP 146



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 87/245 (35%), Gaps = 43/245 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------------ 265
            ++ + + + +  +    I R+ + +  +   P  +     +  + RF            
Sbjct: 307 AWTQDNKDIFF--WAKGKINRLNVANKTVTNIPFSVKTQLDVQPSVRFKQDIDKDVFDVK 364

Query: 266 -------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQ 315
                  S +G +            I+   L      RLT  L  +I      +S D   
Sbjct: 365 MLRMTQVSPDGSKVAFEA----LGKIWLKTLPDGKMTRLT-ELGNDIEELYPQWSRDGKN 419

Query: 316 IVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--- 371
           IVF +  +  +  + V+ + G   K+++ +    Y +P +SP G+L+ + K  G      
Sbjct: 420 IVFTTWNDQDQGTVQVISAKGGKAKQLTTET-GKYVEPTFSPNGELVVYRKTQGGHLTPR 478

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                  +  +     Q + +  +        S     + F    D DT  +L SI+L+G
Sbjct: 479 TWSQEPGLYKVDLKTKQNKKISAEGYQAQFGASAD--RIFFMNTGDNDT-PQLASINLDG 535

Query: 426 RNETL 430
            ++ +
Sbjct: 536 FDKRV 540



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 109/284 (38%), Gaps = 44/284 (15%)

Query: 169 EKGDFNSRILFVSESVVSGII-----KNSLCV-MDRDGANIRYLTPSRDQILFEPRFSPN 222
           +K  F+ ++L +++    G          + +    DG   R      D     P++S +
Sbjct: 357 DKDVFDVKMLRMTQVSPDGSKVAFEALGKIWLKTLPDGKMTRLTELGNDIEELYPQWSRD 416

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-- 280
            + + + T++D+D   V ++  +  +A K++       + P FS NG+  +    +    
Sbjct: 417 GKNIVFTTWNDQDQGTVQVISAKGGKA-KQLTTETGKYVEPTFSPNGELVVYRKTQGGHL 475

Query: 281 -------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQ 332
                     +Y VDL++   +++         A +   + +I F +  +    QL  + 
Sbjct: 476 TPRTWSQEPGLYKVDLKTKQNKKI---SAEGYQAQFGASADRIFFMNTGDNDTPQLASIN 532

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            +G D KR+    + +  +   SP G+ +AF     E+F + V       E + +  +  
Sbjct: 533 LDGFD-KRVHYSSKHA-TEFRVSPDGEQLAFA----ERFKVWVTPFAKHGETVEIGPNAS 586

Query: 393 QAP------------TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             P            +W+     L ++       G +LY  +++
Sbjct: 587 NLPVTQLSVRAGESISWNSKSNQLYWT------LGPELYQANVD 624


>gi|163788034|ref|ZP_02182480.1| WD40-like repeat/amidohydrolase domain protein [Flavobacteriales
           bacterium ALC-1]
 gi|159876354|gb|EDP70412.1| WD40-like repeat/amidohydrolase domain protein [Flavobacteriales
           bacterium ALC-1]
          Length = 1130

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 19/207 (9%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
              +   ++   S +GK  +     D   D+Y++ +      R+T  +  ++   YSPD 
Sbjct: 50  TTDKGTWISVDVSPDGKTIMF----DMMGDLYTIPIAGGKATRITEGMPYDVHPRYSPDG 105

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             I+F SD+ G + L+ M     +QK++++DK   +    WSP GD I  T+        
Sbjct: 106 KSILFISDKSGSDNLWTMDLASKEQKQLTKDKNKYHVSASWSPDGDYIVGTRGRRNIKPF 165

Query: 374 GVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDG-DTGSKL--YSI----DLN 424
            V K  GS   LL +   S    P +S  G+ + FS ++   +  ++L  Y I      +
Sbjct: 166 IVHKDGGSGANLLSKQKASKFIDPAFSADGKHIYFSARRGAWNYNAQLPQYQIMSFNRED 225

Query: 425 GRNETLIN------TPAYASDPQWVGF 445
              ET+ +      TP  + D +W+ +
Sbjct: 226 AATETVTSRYGSAFTPTLSKDGKWMVY 252



 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 51/227 (22%), Positives = 94/227 (41%), Gaps = 18/227 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + + +      D+  + +          RI       + PR+S +GK  L    K 
Sbjct: 62  SPDGKTIMFDMM--GDLYTIPI----AGGKATRITEGMPYDVHPRYSPDGKSILFISDKS 115

Query: 280 EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            + +++++DL S   ++LT      ++SAS+SPD   IV    R   +   V +  GS  
Sbjct: 116 GSDNLWTMDLASKEQKQLTKDKNKYHVSASWSPDGDYIVGTRGRRNIKPFIVHKDGGSGA 175

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------KFAIGVMKK-DGSQERLLVED 389
             +S+ K + + DP +S  G  I F+   G         ++ I    + D + E +    
Sbjct: 176 NLLSKQKASKFIDPAFSADGKHIYFSARRGAWNYNAQLPQYQIMSFNREDAATETVTSRY 235

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            +   PT S  G+ +++  + +  TG  L   +L    E  +  P  
Sbjct: 236 GSAFTPTLSKDGKWMVYGSRFEEHTG--LVLRNLKSGEERWLAYPVQ 280



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 98/301 (32%), Gaps = 46/301 (15%)

Query: 184 VVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
              G       ++ +DG +    L+  +     +P FS + + + ++           L 
Sbjct: 155 GTRGRRNIKPFIVHKDGGSGANLLSKQKASKFIDPAFSADGKHIYFSARRGAWNYNAQLP 214

Query: 243 D------TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
                   R D A + + +       P  S +GK  +   + +E   +   +L+S     
Sbjct: 215 QYQIMSFNREDAATETVTSRYGSAFTPTLSKDGKWMVYGSRFEEHTGLVLRNLKSGEERW 274

Query: 297 LTNTLFINISASYSPDS--SQIVFE-------------------SDREGKEQLYVMQSNG 335
           L   +  +   S +P      + F                    +D +  E  + +  + 
Sbjct: 275 LAYPVQRDDQESIAPLGVLPAMAFTPDSKNLIASYGGKLYKIGIADSKATEIPFSVDVDL 334

Query: 336 SDQKRISQDKEASYFDPVW---------SPQGDLIAFTKFSGEKFAIGVMK-KDGSQERL 385
                +S           +         SP G  IAFT  +     + VM    G+ +RL
Sbjct: 335 DMGPMVSFKYPIDDSPEAFVTQIRGAKPSPDGSQIAFTALN----RLYVMDLPSGTPKRL 390

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN--ETLINTPAYASDPQWV 443
              +     P WSP G  ++F+  K    G  LY ++ +GR     L       ++P W 
Sbjct: 391 TNHNFTEAMPAWSPDGTQIVFTTWK--PDGGHLYKVNASGRGNATQLTKERGIYTNPAWS 448

Query: 444 G 444
            
Sbjct: 449 Y 449



 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 24/178 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G +   +        +Y +DL S   +RLTN  F     ++SPD +QIVF + +   
Sbjct: 363 SPDGSQIAFTA----LNRLYVMDLPSGTPKRLTNHNFTEAMPAWSPDGTQIVFTTWKPDG 418

Query: 326 EQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------- 371
             LY + ++G  +  ++++++   Y +P WS + + IAFTK + + +             
Sbjct: 419 GHLYKVNASGRGNATQLTKER-GIYTNPAWSYKSNRIAFTKGAAQTYDDAINPFNGRTVE 477

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            +  +  DG    ++        P ++     +          G  L SI  +G +E 
Sbjct: 478 ELAWISSDGGNITIIDRAKGRGLPHFTKVNDRIYL-----NHGGKGLISIRWDGTDEK 530



 Score = 96.6 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 112/326 (34%), Gaps = 59/326 (18%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           D++   + +       ILF+S+   S      L  MD      + LT  +++      +S
Sbjct: 96  DVHPRYSPDG----KSILFISDKSGSDN----LWTMDLASKEQKQLTKDKNKYHVSASWS 147

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQKD 279
           P+   +          ++ +++          +   + S  + P FS++GK    S ++ 
Sbjct: 148 PDGDYIVGT--RGRRNIKPFIVHKDGGSGANLLSKQKASKFIDPAFSADGKHIYFSARRG 205

Query: 280 --------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                       I S + +  ATE +T+      + + S D   +V+ S  E    L + 
Sbjct: 206 AWNYNAQLPQYQIMSFNREDAATETVTSRYGSAFTPTLSKDGKWMVYGSRFEEHTGLVLR 265

Query: 332 QSNGSDQKRISQDKEASYFDP----------VWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                +++ ++   +    +            ++P    +    + G+ + IG+     +
Sbjct: 266 NLKSGEERWLAYPVQRDDQESIAPLGVLPAMAFTPDSKNLI-ASYGGKLYKIGIADSKAT 324

Query: 382 QERLLVEDSNLQAP--TW--------------------SPSGRSLIFSRKKDGDTGSKLY 419
           +    V+      P  ++                    SP G  + F+        ++LY
Sbjct: 325 EIPFSVDVDLDMGPMVSFKYPIDDSPEAFVTQIRGAKPSPDGSQIAFTA------LNRLY 378

Query: 420 SIDL-NGRNETLINTPAYASDPQWVG 444
            +DL +G  + L N     + P W  
Sbjct: 379 VMDLPSGTPKRLTNHNFTEAMPAWSP 404



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 51/295 (17%), Positives = 97/295 (32%), Gaps = 34/295 (11%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            T +KG + S  +      +   +   L  +   G     +T         PR+SP+ + 
Sbjct: 49  FTTDKGTWISVDVSPDGKTIMFDMMGDLYTIPIAGGKATRITEG-MPYDVHPRYSPDGKS 107

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           + + + D      ++ MD       +   +     ++  +S +G   +   +    +  +
Sbjct: 108 ILFIS-DKSGSDNLWTMDLASKEQKQLTKDKNKYHVSASWSPDGDYIV-GTRGRRNIKPF 165

Query: 286 SVDLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGK------EQLYVMQSNG 335
            V     +   L +    + FI+   ++S D   I F + R          Q  +M  N 
Sbjct: 166 IVHKDGGSGANLLSKQKASKFID--PAFSADGKHIYFSARRGAWNYNAQLPQYQIMSFNR 223

Query: 336 SDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-----ED 389
            D    +   +  S F P  S  G  + +     E   + +      +ER L      +D
Sbjct: 224 EDAATETVTSRYGSAFTPTLSKDGKWMVYGSRFEEHTGLVLRNLKSGEERWLAYPVQRDD 283

Query: 390 SNLQAP-------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               AP        ++P  ++LI         G KLY I +     T I      
Sbjct: 284 QESIAPLGVLPAMAFTPDSKNLI------ASYGGKLYKIGIADSKATEIPFSVDV 332



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 21/171 (12%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           + L+       T      IS   SPD   I+F  D  G   LY +   G    RI++   
Sbjct: 39  LPLEPTRKVNFTTDKGTWISVDVSPDGKTIMF--DMMG--DLYTIPIAGGKATRITEGMP 94

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSL 404
                P +SP G  I F         +  M     +++ L +D N    + +WSP G  +
Sbjct: 95  YDV-HPRYSPDGKSILFISDKSGSDNLWTMDLASKEQKQLTKDKNKYHVSASWSPDGDYI 153

Query: 405 I----------FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
           +          F   KDG +G+ L    L+ +  +    PA+++D + + F
Sbjct: 154 VGTRGRRNIKPFIVHKDGGSGANL----LSKQKASKFIDPAFSADGKHIYF 200



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 89/306 (29%), Gaps = 67/306 (21%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           I D     +T  +G   S       S ++    N L VMD      + LT   +     P
Sbjct: 346 IDDSPEAFVTQIRGAKPS----PDGSQIAFTALNRLYVMDLPSGTPKRLTN-HNFTEAMP 400

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-- 275
            +SP+  ++ + T+   D   +Y ++        ++   R +   P +S    R   +  
Sbjct: 401 AWSPDGTQIVFTTW-KPDGGHLYKVNASGRGNATQLTKERGIYTNPAWSYKSNRIAFTKG 459

Query: 276 ----------------------VQKDEAMDIYSVDLQSNATERLT--------NTLFIN- 304
                                 +  D          +       T        N      
Sbjct: 460 AAQTYDDAINPFNGRTVEELAWISSDGGNITIIDRAKGRGLPHFTKVNDRIYLNHGGKGL 519

Query: 305 ISASYSPDSS-----------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           IS  +  D +           +    SD  GK+    M ++    +    +  +   +  
Sbjct: 520 ISIRW--DGTDEKEHLKLTGIKTYGSSDIFGKDHETAMPTHEEGWRE--NNTGSRPSEIR 575

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL------------QAPTWSPSG 401
            SP G   A  K + + +++ +     +    L    N             + P WS + 
Sbjct: 576 ISPNGTH-ALAKINNDIYSVIIPMIGTTPSINLANPKNAAFPANKLTVIGGEFPEWSSNS 634

Query: 402 RSLIFS 407
           + + +S
Sbjct: 635 KKVHWS 640


>gi|113968357|ref|YP_732150.1| amidohydrolase [Shewanella sp. MR-4]
 gi|113883041|gb|ABI37093.1| amidohydrolase [Shewanella sp. MR-4]
          Length = 1062

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 75/199 (37%), Gaps = 25/199 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK  +  +  D    IY + +     + L   +   +   YSPD   I F SD +
Sbjct: 58  SVSPDGKHLVFDLLGD----IYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDAD 113

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKK 378
           G + +++M ++GS+ + ++ +       P WSP    +          S     + +   
Sbjct: 114 GGDNIWIMDADGSNPRTVTTETFRLLNSPAWSPDSQYLVGRKHFTASRSLGAGEVWLYHV 173

Query: 379 DGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLYSI----D 422
            G +   L E  N +     P +SP GR + FS+            D+ + +Y I     
Sbjct: 174 AGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRYDT 233

Query: 423 LNGRNETLINTPAYASDPQ 441
             G  E LI     A  P 
Sbjct: 234 QTGDIEILIEGTGGAIRPT 252



 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 92/236 (38%), Gaps = 31/236 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + + +      DI ++ +         K +    +  + P +S +GK    +  
Sbjct: 58  SVSPDGKHLVFDLL--GDIYQIPV----TGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSD 111

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVM 331
            D   +I+ +D   +    +T   F +  S ++SPDS  +V    F + R  G  ++++ 
Sbjct: 112 ADGGDNIWIMDADGSNPRTVTTETFRLLNSPAWSPDSQYLVGRKHFTASRSLGAGEVWLY 171

Query: 332 QSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVM 376
              G +  +++   + E    +P +SP G  I F++                  + I   
Sbjct: 172 HVAGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRY 231

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
                   +L+E       PT SP G  L + ++   D  S LY +DL +G    L
Sbjct: 232 DTQTGDIEILIEGTGGAIRPTPSPDGTKLAYIKRD--DFQSSLYLLDLKSGETTKL 285



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 90/270 (33%), Gaps = 36/270 (13%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +      +   +   +  +   G   + L         +P +SP+ + +A+ 
Sbjct: 51  EGTWMNISVSPDGKHLVFDLLGDIYQIPVTGGEAKPLAQG-IAWQMQPVYSPDGKHIAFT 109

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN-----GKRALISVQKDEAMDI 284
           + D +    +++MD               ++ +P +S +     G++   + +   A ++
Sbjct: 110 S-DADGGDNIWIMDADGSNPRTVTTETFRLLNSPAWSPDSQYLVGRKHFTASRSLGAGEV 168

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESD-------------REGKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 169 WLYHVAGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKI 228

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   D + I  +       P  SP G  +A+ K    + ++ ++     +   L  
Sbjct: 229 KRYDTQTGDIE-ILIEGTGGAIRPTPSPDGTKLAYIKRDDFQSSLYLLDLKSGETTKLYG 287

Query: 389 DSNLQA----------PT--WSPSGRSLIF 406
           D +             PT  W+   + + F
Sbjct: 288 DLDRDMQETWAIHGVYPTMAWTQDNKDIFF 317



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/298 (17%), Positives = 97/298 (32%), Gaps = 49/298 (16%)

Query: 192 SLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT----- 244
            + +    G     LT  P+ ++ L EP +SP+ + + ++  D       Y  D+     
Sbjct: 167 EVWLYHVAGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIY 226

Query: 245 ------RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
                       + +       + P  S +G +     + D    +Y +DL+S  T +L 
Sbjct: 227 KIKRYDTQTGDIEILIEGTGGAIRPTPSPDGTKLAYIKRDDFQSSLYLLDLKSGETTKLY 286

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLY-----------------------VMQSNG 335
             L  ++  +++           ++ K+  +                         Q + 
Sbjct: 287 GDLDRDMQETWAIHGVYPTMAWTQDNKDIFFWAKGKINRLNVANKTVTNIPFSVKTQLDV 346

Query: 336 SDQKRISQDKEASYFD------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
               R  QD +   FD         SP G  +AF         I +      +   L E 
Sbjct: 347 QPSVRFKQDIDKDVFDVKMLRMAQVSPDGSKVAFEALG----KIWLKTLPDGKMSRLTEL 402

Query: 390 SNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            N      P WS  G++++F+   D D G+        G+ + L   P    +P +  
Sbjct: 403 GNDIEELYPQWSRDGKNIVFTTWNDQDQGTVQVISAKGGKAKQLSTEPGKYVEPTFSP 460



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 75/203 (36%), Gaps = 23/203 (11%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQ 277
           SP+  KVA+      + L    + T  D    R+    + I  L P++S +GK  + +  
Sbjct: 372 SPDGSKVAF------EALGKIWLKTLPDGKMSRLTELGNDIEELYPQWSRDGKNIVFTTW 425

Query: 278 KD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQ 327
            D +   +  +  +    ++L+      +  ++SP+   +V+   + G            
Sbjct: 426 NDQDQGTVQVISAKGGKAKQLSTEPGKYVEPTFSPNGELVVYRKTQGGHLTPRTWSQEPG 485

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLL 386
           LY +       K+I+ +   + F        D I F      +   +  +  DG  +R+ 
Sbjct: 486 LYKVDLKTKQNKKITAEGYQAQFGAS----ADRIFFMNTGENDTPQLASINLDGFDKRVH 541

Query: 387 VEDSNLQAPTWSPSGRSLIFSRK 409
               +      SP G  L F+ +
Sbjct: 542 YSSKHATEFRVSPDGEQLAFAER 564



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 9/103 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRS 403
            E ++ +   SP G  + F         I  +   G + + L +    Q  P +SP G+ 
Sbjct: 50  TEGTWMNISVSPDGKHLVFDLLGD----IYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKH 105

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
           + F+   DG  G  ++ +D +G N   + T  +   + P W  
Sbjct: 106 IAFTSDADG--GDNIWIMDADGSNPRTVTTETFRLLNSPAWSP 146



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 71/185 (38%), Gaps = 22/185 (11%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQ 315
           M+   + S +G +            I+   L      RLT  L  +I      +S D   
Sbjct: 365 MLRMAQVSPDGSKVAFEA----LGKIWLKTLPDGKMSRLT-ELGNDIEELYPQWSRDGKN 419

Query: 316 IVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--- 371
           IVF +  +  +  + V+ + G   K++S +    Y +P +SP G+L+ + K  G      
Sbjct: 420 IVFTTWNDQDQGTVQVISAKGGKAKQLSTE-PGKYVEPTFSPNGELVVYRKTQGGHLTPR 478

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                  +  +     Q + +  +        S     + F    + DT  +L SI+L+G
Sbjct: 479 TWSQEPGLYKVDLKTKQNKKITAEGYQAQFGASAD--RIFFMNTGENDT-PQLASINLDG 535

Query: 426 RNETL 430
            ++ +
Sbjct: 536 FDKRV 540



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 89/259 (34%), Gaps = 68/259 (26%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  +  +   + ++ V+   G   + L+    + + EP FSPN + V Y           
Sbjct: 420 IVFTTWNDQDQGTVQVISAKGGKAKQLSTEPGKYV-EPTFSPNGELVVYRKTQGGH---- 474

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
                                L PR +S             +   +Y VDL++   +++T
Sbjct: 475 ---------------------LTPRTWS-------------QEPGLYKVDLKTKQNKKIT 500

Query: 299 NTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   A +   + +I F  +      QL  +  +G D KR+    + +  +   SP 
Sbjct: 501 ---AEGYQAQFGASADRIFFMNTGENDTPQLASINLDGFD-KRVHYSSKHA-TEFRVSPD 555

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------------TWSPSGRSLI 405
           G+ +AF     E+F + V       E + +  +    P            +W+     L 
Sbjct: 556 GEQLAFA----ERFKVWVTPFAKHGETVEIGPNASNLPVTQLSVRAGESISWNSKSNQLY 611

Query: 406 FSRKKDGDTGSKLYSIDLN 424
           ++       G +LY  +++
Sbjct: 612 WT------LGPELYQANVD 624


>gi|145638708|ref|ZP_01794317.1| translocation protein TolB precursor [Haemophilus influenzae
           PittII]
 gi|145272303|gb|EDK12211.1| translocation protein TolB precursor [Haemophilus influenzae
           PittII]
          Length = 143

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 7/147 (4%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +SP+ Q++AY +++++    V  +        K + +F+    AP FS +G R   
Sbjct: 1   MSPAWSPDGQRLAYVSFENKKSQLV--VQDLNSGTRKVVASFQGHNGAPAFSPDGSRLAF 58

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +  +D  ++IY +        +LT+    N   ++SPD + I+F SDR G  Q+Y M ++
Sbjct: 59  ASSRDGVLNIYVMGANGGTPTQLTSGAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDAS 118

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLI 361
           G     +             S  G  +
Sbjct: 119 GGSATVV-----GGRGSAQISADGKTL 140



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 4/134 (2%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++SPD  ++ + S    K QL V   N   +K ++  +  +   P +SP G  +AF  
Sbjct: 2   SPAWSPDGQRLAYVSFENKKSQLVVQDLNSGTRKVVASFQGHN-GAPAFSPDGSRLAFAS 60

Query: 366 FSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  I VM  +G     L     N   P WSP G S++F+  + G    ++Y +D +
Sbjct: 61  SRDGVLNIYVMGANGGTPTQLTSGAGNNTEPAWSPDGNSILFTSDRSGS--PQVYRMDAS 118

Query: 425 GRNETLINTPAYAS 438
           G + T++     A 
Sbjct: 119 GGSATVVGGRGSAQ 132



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 4/96 (4%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
            P WSP G  +A+  F  +K  + V   +    +++     +  AP +SP G  L F+  
Sbjct: 2   SPAWSPDGQRLAYVSFENKKSQLVVQDLNSGTRKVVASFQGHNGAPAFSPDGSRLAFASS 61

Query: 410 KDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
           +DG     +Y +  NG   T L +     ++P W  
Sbjct: 62  RDG--VLNIYVMGANGGTPTQLTSGAGNNTEPAWSP 95



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 57/142 (40%), Gaps = 11/142 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R+ +VS        K+ L V D + +  R +  S       P FSP+  ++A+A+  D 
Sbjct: 10  QRLAYVSFE----NKKSQLVVQDLN-SGTRKVVASFQGHNGAPAFSPDGSRLAFASSRDG 64

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            +L +Y+M       P ++ +       P +S +G   L +  +  +  +Y +D    + 
Sbjct: 65  -VLNIYVMGAN-GGTPTQLTSGAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDASGGSA 122

Query: 295 ERLTNTLFINISASYSPDSSQI 316
             +        SA  S D   +
Sbjct: 123 TVV----GGRGSAQISADGKTL 140



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 9/60 (15%)

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGF 445
            +P WSP G+ L +   ++    S+L   DLN     ++ +       PA++ D   + F
Sbjct: 1   MSPAWSPDGQRLAYVSFENKK--SQLVVQDLNSGTRKVVASFQGHNGAPAFSPDGSRLAF 58


>gi|284036826|ref|YP_003386756.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Spirosoma linguale DSM 74]
 gi|283816119|gb|ADB37957.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Spirosoma linguale DSM 74]
          Length = 512

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 87/215 (40%), Gaps = 18/215 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + +  ++   E    +          PK+I   +       +S + K  + +  ++
Sbjct: 298 SFDGKMLGLSSGVKELGGSIIYTVPVTGGTPKQIT-PKGPSYLHGWSPDKKTLVFTGSRN 356

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              DIYSV        RLT    ++    Y+PD   I F S R G  Q+Y M+++GS+Q+
Sbjct: 357 NEYDIYSVPSAGGPEVRLTEAKGLDDGPEYTPDGKYIYFNSSRTGTMQIYRMKADGSEQE 416

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----------IGVMKKDGSQERLLVE 388
            I+  +   +F P  SP G  I F  F  E+             + ++   GS +  ++ 
Sbjct: 417 AITNGEFHDWF-PHISPDGKWIIFLSFLKEEVKPDDHPFYKHVYLRMLPISGSGQPKVIA 475

Query: 389 -----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                   +  P+WSP  + + F      ++ S +
Sbjct: 476 YIYGGQGTINTPSWSPDSKRVAFISNTAENSVSPI 510



 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 76/212 (35%), Gaps = 20/212 (9%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFIN 304
               + I N    I AP ++ +GK  L     +    +Y+ +L       L        N
Sbjct: 237 TGDRQVIYNVPKSIQAPNWTPDGKTLLY----NGDGLMYTFNLAKRKPTVLNTGDVKNNN 292

Query: 305 ISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                S D   +   S  +  G   +Y +   G   K+I+    +      WSP    + 
Sbjct: 293 NDHVLSFDGKMLGLSSGVKELGGSIIYTVPVTGGTPKQITPKGPSYLHG--WSPDKKTLV 350

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           FT     ++ I  +   G  E  L E       P ++P G+ + F+  + G    ++Y +
Sbjct: 351 FTGSRNNEYDIYSVPSAGGPEVRLTEAKGLDDGPEYTPDGKYIYFNSSRTGTM--QIYRM 408

Query: 422 DLNGRNETLINT-------PAYASDPQWVGFM 446
             +G  +  I         P  + D +W+ F+
Sbjct: 409 KADGSEQEAITNGEFHDWFPHISPDGKWIIFL 440



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 34/99 (34%), Gaps = 14/99 (14%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--------DDEDILRVYL-- 241
            +  M  DG+    +T   +   + P  SP+ + + + ++        D      VYL  
Sbjct: 404 QIYRMKADGSEQEAITNG-EFHDWFPHISPDGKWIIFLSFLKEEVKPDDHPFYKHVYLRM 462

Query: 242 MDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQ 277
           +       PK I      +  I  P +S + KR      
Sbjct: 463 LPISGSGQPKVIAYIYGGQGTINTPSWSPDSKRVAFISN 501


>gi|212632933|ref|YP_002309458.1| amidohydrolase:amidohydrolase-like protein [Shewanella
           piezotolerans WP3]
 gi|212554417|gb|ACJ26871.1| Amidohydrolase:Amidohydrolase-like protein [Shewanella
           piezotolerans WP3]
          Length = 1064

 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 80/211 (37%), Gaps = 25/211 (11%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +I       +    S NGK  +  +  D    IY +       + L   +   +   YSP
Sbjct: 44  KIDVTEGTWMNVSVSPNGKHIVFDLLGD----IYQISTDGGEAKPLAKGIAWQMQPVYSP 99

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FT-KF 366
           D   I F SD +G + +++M+++GS+ + ++ +       P WSP G  +     +T   
Sbjct: 100 DGKYIAFTSDEDGGDNIWIMEADGSNPRPVTTETFRLLNSPAWSPDGQYLVARKHYTGSR 159

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDT 414
           S     + +    G +   L E  N Q     P +SP GR + FS+            D+
Sbjct: 160 SLGAGEVWMYHVAGGEGVKLTERPNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDS 219

Query: 415 GSKLYSI----DLNGRNETLINTPAYASDPQ 441
              +Y I       G  E LI     A  P 
Sbjct: 220 VKGIYKIKRYDTETGDIEVLIQGTGGAIRPT 250



 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 95/236 (40%), Gaps = 31/236 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN + + +      D+L      +      K +    +  + P +S +GK    +  
Sbjct: 56  SVSPNGKHIVF------DLLGDIYQISTDGGEAKPLAKGIAWQMQPVYSPDGKYIAFTSD 109

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVM 331
           +D   +I+ ++   +    +T   F +  S ++SPD   +V    +   R  G  ++++ 
Sbjct: 110 EDGGDNIWIMEADGSNPRPVTTETFRLLNSPAWSPDGQYLVARKHYTGSRSLGAGEVWMY 169

Query: 332 QSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVM 376
              G +  +++   +++    +P +SP G  I F++ +                + I   
Sbjct: 170 HVAGGEGVKLTERPNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVKGIYKIKRY 229

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
             +     +L++       PT SP G+ L + ++      S LY +DL +G+ E L
Sbjct: 230 DTETGDIEVLIQGTGGAIRPTPSPDGKKLAYIKRDG--FQSSLYLLDLKSGKTEKL 283



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 93/254 (36%), Gaps = 25/254 (9%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +  +   +   +   +  +  DG   + L         +P +SP+ + +A+ 
Sbjct: 49  EGTWMNVSVSPNGKHIVFDLLGDIYQISTDGGEAKPLAKG-IAWQMQPVYSPDGKYIAFT 107

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           + D++    +++M+               ++ +P +S +G+  +     +  +   A ++
Sbjct: 108 S-DEDGGDNIWIMEADGSNPRPVTTETFRLLNSPAWSPDGQYLVARKHYTGSRSLGAGEV 166

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDRE-------------GKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 167 WMYHVAGGEGVKLTERPNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVKGIYKI 226

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLV 387
               +   D + + Q    +   P  SP G  +A+ K  G + ++ ++    G  E+L  
Sbjct: 227 KRYDTETGDIEVLIQGTGGAIR-PTPSPDGKKLAYIKRDGFQSSLYLLDLKSGKTEKLYG 285

Query: 388 EDSNLQAPTWSPSG 401
           E       TW+  G
Sbjct: 286 ELDRDMQETWAIHG 299



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 101/324 (31%), Gaps = 70/324 (21%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATY 231
            I F S+          + +M+ DG+N R +T    ++L  P +SP+ Q +     Y   
Sbjct: 103 YIAFTSDEDGGDN----IWIMEADGSNPRPVTTETFRLLNSPAWSPDGQYLVARKHYTGS 158

Query: 232 DDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALIS----------VQKD 279
                  V++         K     N +  +  P +S +G+    S            KD
Sbjct: 159 RSLGAGEVWMYHVAGGEGVKLTERPNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKD 218

Query: 280 ---EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                  I   D ++   E L       I  + SPD  ++ +      +  LY++     
Sbjct: 219 SVKGIYKIKRYDTETGDIEVLIQGTGGAIRPTPSPDGKKLAYIKRDGFQSSLYLLDLKSG 278

Query: 337 DQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             +++          +      Y    W+   D I F      K  I  +  +      +
Sbjct: 279 KTEKLYGELDRDMQETWAIHGVYPTMSWTADNDEIVFWA----KGKINKLNVESKSVAQI 334

Query: 387 -----VEDSNLQAPTW-------------------SPSGRSLIFSRKKDGDTGSKLYSID 422
                 E +   A  +                   SP G+ ++F      +   K++   
Sbjct: 335 PFSVKTERAVQPAVRFQQDLDKDVFDVKMLRMAQVSPDGKKVVF------EALGKIWVKS 388

Query: 423 L-NGRNETLINTPAYASD--PQWV 443
           L +G+   L    +   +  PQW 
Sbjct: 389 LPDGKMSRLTKLDSELRELFPQWS 412



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 106/327 (32%), Gaps = 59/327 (18%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQK 225
               D    +     +    +    + +    G     LT  P+  + L EP +SP+ + 
Sbjct: 141 AWSPDGQYLVARKHYTGSRSLGAGEVWMYHVAGGEGVKLTERPNEQKDLGEPAYSPDGRY 200

Query: 226 VA------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +             Y+    + I ++   DT      + +       + P  S +GK+  
Sbjct: 201 IYFSQDATPGKTFHYSKDSVKGIYKIKRYDTETGD-IEVLIQGTGGAIRPTPSPDGKKLA 259

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-----------ASYSPDSSQIVFESDR 322
              +      +Y +DL+S  TE+L   L  ++             S++ D+ +IVF +  
Sbjct: 260 YIKRDGFQSSLYLLDLKSGKTEKLYGELDRDMQETWAIHGVYPTMSWTADNDEIVFWA-- 317

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDP----------------------VWSPQGDL 360
             K ++  +        +I    +                              SP G  
Sbjct: 318 --KGKINKLNVESKSVAQIPFSVKTERAVQPAVRFQQDLDKDVFDVKMLRMAQVSPDGKK 375

Query: 361 IAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSK 417
           + F         I V    DG   RL   DS L+   P WS  G+ ++F+   D   G+ 
Sbjct: 376 VVFEALG----KIWVKSLPDGKMSRLTKLDSELRELFPQWSRDGKKIVFTTWDDQQQGTV 431

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
             +   N R + L   P    +P +  
Sbjct: 432 SLATVRNKRVKVLTKEPGKYVEPTFSP 458



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 85/200 (42%), Gaps = 19/200 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +KV +       I    L D ++ R  K     R   L P++S +GK+ + +   D
Sbjct: 370 SPDGKKVVFEAL--GKIWVKSLPDGKMSRLTKLDSELR--ELFPQWSRDGKKIVFTTWDD 425

Query: 280 EAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQLY 329
           +     S+  +++   + LT      +  ++SPD   IV+   + G            LY
Sbjct: 426 QQQGTVSLATVRNKRVKVLTKEPGKYVEPTFSPDGETIVYRKAKGGYITPRTWSQETGLY 485

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +  +G +  +I+    AS + P +    + + F + SGE   +  +  +G ++R+    
Sbjct: 486 QVDIDGDNNVKIT----ASGYQPQFGADNERVYFME-SGETPQLSSIGLNGFEKRVHYTS 540

Query: 390 SNLQAPTWSPSGRSLIFSRK 409
            +      SP G+ L F+ +
Sbjct: 541 KHATEFRVSPDGKQLAFAER 560



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 89/252 (35%), Gaps = 41/252 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------------ 265
            ++ +  ++ +  +    I ++ +    + + P  +   R++  A RF            
Sbjct: 305 SWTADNDEIVF--WAKGKINKLNVESKSVAQIPFSVKTERAVQPAVRFQQDLDKDVFDVK 362

Query: 266 -------SSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQI 316
                  S +GK+ +          I+   L      RLT  ++    +   +S D  +I
Sbjct: 363 MLRMAQVSPDGKKVVFEA----LGKIWVKSLPDGKMSRLTKLDSELRELFPQWSRDGKKI 418

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----- 371
           VF +  + ++    + +  + + ++   +   Y +P +SP G+ I + K  G        
Sbjct: 419 VFTTWDDQQQGTVSLATVRNKRVKVLTKEPGKYVEPTFSPDGETIVYRKAKGGYITPRTW 478

Query: 372 ----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +  +  DG     +        P +      + F          +L SI LNG  
Sbjct: 479 SQETGLYQVDIDGDNNVKITASGYQ--PQFGADNERVYFMES---GETPQLSSIGLNGFE 533

Query: 428 ETLINTPAYASD 439
           + +  T  +A++
Sbjct: 534 KRVHYTSKHATE 545



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 9/103 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRS 403
            E ++ +   SP G  I F         I  +  DG + + L +    Q  P +SP G+ 
Sbjct: 48  TEGTWMNVSVSPNGKHIVFDLLGD----IYQISTDGGEAKPLAKGIAWQMQPVYSPDGKY 103

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
           + F+  +DG  G  ++ ++ +G N   + T  +   + P W  
Sbjct: 104 IAFTSDEDG--GDNIWIMEADGSNPRPVTTETFRLLNSPAWSP 144



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 75/232 (32%), Gaps = 67/232 (28%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR- 264
           +         EP FSP+ + + Y                            +   + PR 
Sbjct: 443 VLTKEPGKYVEPTFSPDGETIVY-------------------------RKAKGGYITPRT 477

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S             +   +Y VD+  +   ++T + +      +  D+ ++ F  +   
Sbjct: 478 WS-------------QETGLYQVDIDGDNNVKITASGY---QPQFGADNERVYFM-ESGE 520

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             QL  +  NG +++     K A+ F    SP G  +AF     E+F + V       E 
Sbjct: 521 TPQLSSIGLNGFEKRVHYTSKHATEF--RVSPDGKQLAFA----ERFKVFVTPFAKHGET 574

Query: 385 LLVEDSNLQAP------------TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           + +       P            +W+     L ++       G +LY + ++
Sbjct: 575 VQIGPKASNLPVTQLSVRAGESISWNNDNNQLYWT------LGPELYQVKVD 620



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 60/166 (36%), Gaps = 25/166 (15%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +++    S   +  L  +D DG N   +T S     ++P+F  + ++V +     E    
Sbjct: 472 YITPRTWS--QETGLYQVDIDGDNNVKITASG----YQPQFGADNERVYFM----ESGET 521

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---------VQKDEAMDIYSVDL 289
             L    ++   KR+          R S +GK+   +           K           
Sbjct: 522 PQLSSIGLNGFEKRVHYTSKHATEFRVSPDGKQLAFAERFKVFVTPFAKHGETVQIGPKA 581

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +    +L+     +IS  ++ D++Q+ +        +LY ++ + 
Sbjct: 582 SNLPVTQLSVRAGESIS--WNNDNNQLYWTL----GPELYQVKVDT 621



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 13/71 (18%)

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TP 434
           Q ++ V +      + SP+G+ ++F      D    +Y I  +G     +         P
Sbjct: 42  QVKIDVTEGTWMNVSVSPNGKHIVF------DLLGDIYQISTDGGEAKPLAKGIAWQMQP 95

Query: 435 AYASDPQWVGF 445
            Y+ D +++ F
Sbjct: 96  VYSPDGKYIAF 106


>gi|254480026|ref|ZP_05093274.1| Amidohydrolase family protein [marine gamma proteobacterium
           HTCC2148]
 gi|214039588|gb|EEB80247.1| Amidohydrolase family protein [marine gamma proteobacterium
           HTCC2148]
          Length = 1082

 Score =  137 bits (346), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 56/241 (23%), Positives = 94/241 (39%), Gaps = 30/241 (12%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A A   D+    V   D         I       ++   S +G   +  +  D    IYS
Sbjct: 21  AIAQAGDKTGWEVNNPDFSSQPRSASINVTEGTWVSLDVSPDGSTIVFDLLGD----IYS 76

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           + ++      +T  +  +I   +SPD SQI F SDR+G + +++      D ++++ +  
Sbjct: 77  LPIEGGKATAITQGMAWDIQPRFSPDGSQIAFISDRDGGDNVWLQDLGSGDSRQLTFESF 136

Query: 347 ASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKKDGS---QERLLVEDSNL------ 392
               +P WSP G  IA      T  S     I +   DG+   + + +V   N       
Sbjct: 137 RLLNNPSWSPDGQYIAARKHFTTSRSLGTGEIWLYHVDGNRSQKGQQIVARPNETFQKEQ 196

Query: 393 QAPTWSPSGRSLIFSRK--------KDGDTGSKLYSIDL----NGRNETLINTPAYASDP 440
             PT+S  G S+ FSR            D+  +L+ I      +G  +T+   P  A+ P
Sbjct: 197 GEPTFSADGNSIYFSRDVSPGNTFVYHQDSNKELFQIRRVNLDDGSIDTVAGGPGGAARP 256

Query: 441 Q 441
            
Sbjct: 257 A 257



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 98/309 (31%), Gaps = 62/309 (20%)

Query: 181 SESVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFE----PRFSPNQQKVAYATYDD 233
             +    +    + +   DG      + +    ++   +    P FS +   + ++    
Sbjct: 156 HFTTSRSLGTGEIWLYHVDGNRSQKGQQIVARPNETFQKEQGEPTFSADGNSIYFSRDVS 215

Query: 234 EDILRVYLMDTRIDRAPKR-----------IGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                VY  D+  +    R           +         P  S +GK+     +     
Sbjct: 216 PGNTFVYHQDSNKELFQIRRVNLDDGSIDTVAGGPGGAARPAPSPDGKQLAYVKRVRARS 275

Query: 283 DIYSVDLQSNATERLTNTLFINI-----------SASYSPDSSQIVFESDREGKEQLYVM 331
            ++ +DL +     + + L  ++           +  ++PDS  IVF +      +++ +
Sbjct: 276 RLFVMDLATGEERMIFDALDQDMQEIWAVHGVYPNMDWTPDSQNIVFWAQ----GKIWKI 331

Query: 332 QSNGSDQKRISQD--KEASYFDP--------------------VWSPQGDLIAFTKFSGE 369
            +NG     I      +  ++ P                      SP G  + F      
Sbjct: 332 NANGEGLSEIPFSVVDKREFYPPIQFAVDVAPDEFDTRMVRFASRSPDGSAVVFESLG-- 389

Query: 370 KFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              + +   D   +RL  +  +    +P WSP  +SL F R  D  + + +  ++ NG  
Sbjct: 390 --ELYIKHSDKDAKRLTSDKNEGFDYSPVWSPDSKSLYFMRWND-QSLTSIRRVNANGGK 446

Query: 428 ETLINTPAY 436
              +  P  
Sbjct: 447 SKRLTVPTG 455



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 50/330 (15%), Positives = 103/330 (31%), Gaps = 74/330 (22%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YAT 230
           S+I F+S+          + + D    + R LT    ++L  P +SP+ Q +A    + T
Sbjct: 104 SQIAFISDRDGGDN----VWLQDLGSGDSRQLTFESFRLLNNPSWSPDGQYIAARKHFTT 159

Query: 231 YDDEDILRVYLMDTRIDRAP-------KRIGNFRSMILAPRFSSNGKRALISVQKDEA-- 281
                   ++L     +R+        +    F+     P FS++G     S        
Sbjct: 160 SRSLGTGEIWLYHVDGNRSQKGQQIVARPNETFQKEQGEPTFSADGNSIYFSRDVSPGNT 219

Query: 282 -----------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                        I  V+L   + + +          + SPD  Q+ +      + +L+V
Sbjct: 220 FVYHQDSNKELFQIRRVNLDDGSIDTVAGGPGGAARPAPSPDGKQLAYVKRVRARSRLFV 279

Query: 331 MQSNGSDQKRIS----------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           M     +++ I                 Y +  W+P    I F         I  +  +G
Sbjct: 280 MDLATGEERMIFDALDQDMQEIWAVHGVYPNMDWTPDSQNIVFWAQG----KIWKINANG 335

Query: 381 SQER---------------------LLVEDSNLQAPTW---SPSGRSLIFSRKKDGDTGS 416
                                    +  ++ + +   +   SP G +++F      ++  
Sbjct: 336 EGLSEIPFSVVDKREFYPPIQFAVDVAPDEFDTRMVRFASRSPDGSAVVF------ESLG 389

Query: 417 KLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           +LY    +   + L +     +   P W  
Sbjct: 390 ELYIKHSDKDAKRLTSDKNEGFDYSPVWSP 419



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 111/334 (33%), Gaps = 51/334 (15%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPA---SWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           E  L+ V   +   G++  + P       +   T S D          D +    FV   
Sbjct: 167 EIWLYHVDGNRSQKGQQIVARPNETFQKEQGEPTFSADGNSIYFSR--DVSPGNTFVYHQ 224

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             +  +     V   DG+               P  SP+ +++AY         R+++MD
Sbjct: 225 DSNKELFQIRRVNLDDGS--IDTVAGGPGGAARPAPSPDGKQLAYVK-RVRARSRLFVMD 281

Query: 244 TRIDRAP----------KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                            + I     +     ++ + +  +   Q      I+ ++     
Sbjct: 282 LATGEERMIFDALDQDMQEIWAVHGVYPNMDWTPDSQNIVFWAQG----KIWKINANGEG 337

Query: 294 TERLTNT------------LFINISA-----------SYSPDSSQIVFESDREGKEQLYV 330
              +  +              ++++            S SPD S +VFES      +LY+
Sbjct: 338 LSEIPFSVVDKREFYPPIQFAVDVAPDEFDTRMVRFASRSPDGSAVVFES----LGELYI 393

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLV-E 388
             S+   ++  S   E   + PVWSP    + F +++ +   +I  +  +G + + L   
Sbjct: 394 KHSDKDAKRLTSDKNEGFDYSPVWSPDSKSLYFMRWNDQSLTSIRRVNANGGKSKRLTVP 453

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  + SP G  L+F +         L+++D
Sbjct: 454 TGQYTELSVSPKGDQLLFRKIAASALLGSLHTVD 487



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 94/291 (32%), Gaps = 53/291 (18%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGII-----KNSLCVMDRDGANIRYLTPSRDQ 212
               I  ++     +F++R++  +     G          L +   D    R  +   + 
Sbjct: 351 FYPPIQFAVDVAPDEFDTRMVRFASRSPDGSAVVFESLGELYIKHSDKDAKRLTSDKNEG 410

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             + P +SP+ + + +  ++D+ +  +  ++       KR+            S  G + 
Sbjct: 411 FDYSPVWSPDSKSLYFMRWNDQSLTSIRRVNAN-GGKSKRLTVPTGQYTELSVSPKGDQL 469

Query: 273 LI----SVQKDEAMD-----IYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDR 322
           L     +     ++      IY  D+       +T+ +        +  D    ++  +R
Sbjct: 470 LFRKIAASALLGSLHTVDSGIYLYDISD----EITHFVSKRGTYPHFGADDR--IYSQER 523

Query: 323 ----------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                          L  M  NG+D +  +Q + A+  +   SP G  IAF     E   
Sbjct: 524 AETAIGRGSKTASTLLLSMTPNGNDVRIFAQSERATRIER--SPTGSHIAFL----EGHH 577

Query: 373 IGVMKK--DGSQERLLVEDSN-LQAPT------------WSPSGRSLIFSR 408
           + +      G    L  +       PT            WS +G S+ +S 
Sbjct: 578 VYLQPAINTGKTLSLTTDGGLGTTFPTKKLSAVGGTYMHWSANGDSISWST 628


>gi|32474079|ref|NP_867073.1| TolB protein [Rhodopirellula baltica SH 1]
 gi|32444616|emb|CAD74618.1| probable TolB protein [Rhodopirellula baltica SH 1]
          Length = 1074

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 76/315 (24%), Positives = 131/315 (41%), Gaps = 54/315 (17%)

Query: 163 YQSITGEKGDFN---SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           ++     +G F+   +R++F SE   S      + V D +  +I+ ++P   +       
Sbjct: 79  FEGRRAGEGYFSADGTRMVFQSERDPSNPF-YQIYVSDLETGDIQRVSPGFGKTTCG-WI 136

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            PN +KV +A+             T  D   +R+           F ++G+    S   D
Sbjct: 137 HPNGEKVLFAS-------------THADANSERLQKEEL-----DFRASGESRRYSWDYD 178

Query: 280 EAMDIYSVDLQ------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ------ 327
              ++Y+ +L       +     LT+ +  +   SYSPD  QIVF S+R    +      
Sbjct: 179 PNYELYAAELDQIEPGSTKGLTALTSAMGYDAEGSYSPDGKQIVFASNRAAYSRELTERE 238

Query: 328 -------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFA 372
                        LY+M ++GS+ KR++ +       P +SP G  I + +F  +G    
Sbjct: 239 REQFERDPAFMIDLYIMNADGSNVKRLTNE-PGYDGGPFFSPDGQRICWRRFAPNGATAE 297

Query: 373 IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE--T 429
           I  MK DGS  + L E ++   AP + PSG  L+F+  K G    +LY +  +G  E   
Sbjct: 298 IFTMKTDGSDVQRLTEINAMSWAPFYHPSGEFLVFTTNKHGFANFELYLVRADGEGEPVR 357

Query: 430 LINTPAYASDPQWVG 444
           L  T  +   P ++ 
Sbjct: 358 LTTTEGFDGLPVFLP 372



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 71/186 (38%), Gaps = 23/186 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +M+ DG+N++ LT         P FSP+ Q++ +  +                   +
Sbjct: 251 DLYIMNADGSNVKRLTN-EPGYDGGPFFSPDGQRICWRRFAPNGATAEIFTMKTDGSDVQ 309

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQS-NATERLTNTLFINISAS 308
           R+    +M  AP +  +G+  + +  K      ++Y V         RLT T   +    
Sbjct: 310 RLTEINAMSWAPFYHPSGEFLVFTTNKHGFANFELYLVRADGEGEPVRLTTTEGFDGLPV 369

Query: 309 YSPDSSQIVFESDR-----------EGKE-----QLYVMQSNGSDQKR---ISQDKEASY 349
           + P+ +Q+ + + R           +G+      Q+Y+   +    +R   +++  + + 
Sbjct: 370 FLPNGNQLSWTTTRVVDSDGKIVMEDGEPKKSTSQIYLADFDVETARRRLGLTESSDNNS 429

Query: 350 FDPVWS 355
            D   S
Sbjct: 430 TDEDAS 435


>gi|56459714|ref|YP_154995.1| hypothetical protein IL0605 [Idiomarina loihiensis L2TR]
 gi|56178724|gb|AAV81446.1| Uncharacterized conserved secreted protein [Idiomarina loihiensis
           L2TR]
          Length = 1058

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 87/234 (37%), Gaps = 25/234 (10%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            +   E      + D + +     I       +    S +G+  +  +  D    IY + 
Sbjct: 19  VSMAQEQTQGWDVSDPQGEFKTIDISVNSGTWMNVDVSPDGEYIVFDLLGD----IYRMP 74

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                 E+L   +  ++   YSP+   I F SD+ G + ++VM ++G++ + ++++    
Sbjct: 75  FGGGEAEKLIGGIAWHMQPVYSPNGRYIAFTSDQGGGDNIWVMDADGNNVRAVTEETFRL 134

Query: 349 YFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSP 399
              P WSP  + +          S     + +  + G     L E  N Q     P +SP
Sbjct: 135 LNSPAWSPDSEFLVARKHFTASRSLGAGEVWMYHRSGGSGVQLTERPNDQKDLGEPAFSP 194

Query: 400 SGRSLIFSRK--------KDGDTGSKLYSIDL----NGRNETLINTPAYASDPQ 441
            G+ + FS+            D+   +Y I       G  ETLI+    A  P 
Sbjct: 195 DGKYIYFSQDDTPGKTFHYSKDSLEGIYDIKRFERETGEIETLISGAGGAIRPT 248



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 96/296 (32%), Gaps = 42/296 (14%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            G + +  +      +   +   +  M   G     L         +P +SPN + +A+ 
Sbjct: 47  SGTWMNVDVSPDGEYIVFDLLGDIYRMPFGGGEAEKLI-GGIAWHMQPVYSPNGRYIAFT 105

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           + D      +++MD   +           ++ +P +S + +  +     +  +   A ++
Sbjct: 106 S-DQGGGDNIWVMDADGNNVRAVTEETFRLLNSPAWSPDSEFLVARKHFTASRSLGAGEV 164

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDR-------------EGKEQL 328
           +       +  +LT            ++SPD   I F  D              EG   +
Sbjct: 165 WMYHRSGGSGVQLTERPNDQKDLGEPAFSPDGKYIYFSQDDTPGKTFHYSKDSLEGIYDI 224

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
              +    + + +          P  SP G  +A+ K       + V+     + + +  
Sbjct: 225 KRFERETGEIETLIS-GAGGAIRPTPSPDGRYLAYIKREDFDSVLYVLDLKTGEHKRVYG 283

Query: 388 -------EDSNLQA--PT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                  E   +    PT  W+P  + L+F        G  +  ++++  +  +I 
Sbjct: 284 KMERDMQETWAIHGVYPTMDWTPDSKQLVFWA------GGHIQKLNIDDGSARIIP 333



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 109/301 (36%), Gaps = 57/301 (18%)

Query: 192 SLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT----- 244
            + +  R G +   LT  P+  + L EP FSP+ + + ++  D       Y  D+     
Sbjct: 163 EVWMYHRSGGSGVQLTERPNDQKDLGEPAFSPDGKYIYFSQDDTPGKTFHYSKDSLEGIY 222

Query: 245 ------RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
                 R     + + +     + P  S +G+      ++D    +Y +DL++   +R+ 
Sbjct: 223 DIKRFERETGEIETLISGAGGAIRPTPSPDGRYLAYIKREDFDSVLYVLDLKTGEHKRVY 282

Query: 299 NTLFINISASYS-----------PDSSQIVFESDREGKEQLYVMQSNGSDQKRI------ 341
             +  ++  +++           PDS Q+VF +       +  +  +    + I      
Sbjct: 283 GKMERDMQETWAIHGVYPTMDWTPDSKQLVFWA----GGHIQKLNIDDGSARIIPFKVET 338

Query: 342 ----------SQDKEASYFD------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                      Q+ EA  FD         SPQGD + +        ++        + + 
Sbjct: 339 EKKVQHALGFKQNVEADQFDVKMLRMAQVSPQGDAVIYEALG----SLYQRSLPDGEPQR 394

Query: 386 LVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWV 443
           L    + +  P +S  G  ++F R  D      +   D++  +E ++NT      +P + 
Sbjct: 395 LTNSEDFELYPQYSRDGEKVVFVRWNDEAQAKVIVR-DISSGDEQVLNTGQGNFVEPTFS 453

Query: 444 G 444
            
Sbjct: 454 P 454



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 84/232 (36%), Gaps = 28/232 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP    V Y      + L      +  D  P+R+ N     L P++S +G++ +     D
Sbjct: 368 SPQGDAVIY------EALGSLYQRSLPDGEPQRLTNSEDFELYPQYSRDGEKVVFVRWND 421

Query: 280 EA-MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG----------KEQL 328
           EA   +   D+ S   + L       +  ++SP+   +V+   R G              
Sbjct: 422 EAQAKVIVRDISSGDEQVLNTGQGNFVEPTFSPNGKHVVYRKVRGGYLISDKFGLENGIY 481

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V  S  ++ ++I++        P +  + D + +    G+K  +  +     ++R L +
Sbjct: 482 RVAVSANAEPEQIAESG----HLPQYGARNDRV-YLMTPGDKPTLSAIDLRTLEQRDLYQ 536

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                    SP G+ L F+ +       K++   L  R   +   P     P
Sbjct: 537 SELATEFRVSPDGKQLAFAER------FKVFVTPLVERGSVINVGPGDKQMP 582



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 87/235 (37%), Gaps = 37/235 (15%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----------FRS 258
           S       P  SP+ + +AY   +D D + +Y++D +     +  G              
Sbjct: 239 SGAGGAIRPTPSPDGRYLAYIKREDFDSV-LYVLDLKTGEHKRVYGKMERDMQETWAIHG 297

Query: 259 MILAPRFSSNGKRALISV--------QKDEAMDIYSVDLQSNATERLTNTLFINISA--- 307
           +     ++ + K+ +             D +  I    +++    +       N+ A   
Sbjct: 298 VYPTMDWTPDSKQLVFWAGGHIQKLNIDDGSARIIPFKVETEKKVQHALGFKQNVEADQF 357

Query: 308 --------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                     SP    +++E+       LY       + +R++ + E     P +S  G+
Sbjct: 358 DVKMLRMAQVSPQGDAVIYEA----LGSLYQRSLPDGEPQRLT-NSEDFELYPQYSRDGE 412

Query: 360 LIAFTKFSGE-KFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDG 412
            + F +++ E +  + V       E++L     N   PT+SP+G+ +++ + + G
Sbjct: 413 KVVFVRWNDEAQAKVIVRDISSGDEQVLNTGQGNFVEPTFSPNGKHVVYRKVRGG 467



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 93/269 (34%), Gaps = 43/269 (15%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR- 238
           V     +   +  + V D    + + L   +   + EP FSPN + V Y       ++  
Sbjct: 414 VVFVRWNDEAQAKVIVRDISSGDEQVLNTGQGNFV-EPTFSPNGKHVVYRKVRGGYLISD 472

Query: 239 -------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                  +Y +    +  P++I     +   P++ +   R  + +   +   + ++DL++
Sbjct: 473 KFGLENGIYRVAVSANAEPEQIAESGHL---PQYGARNDRVYL-MTPGDKPTLSAIDLRT 528

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS----------NGSDQKRI 341
                L  +  +      SPD  Q+ F      + +++V              G  Q  +
Sbjct: 529 LEQRDLYQSE-LATEFRVSPDGKQLAFA----ERFKVFVTPLVERGSVINVGPGDKQMPV 583

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---KKDGSQERLLVEDSN---LQAP 395
            Q    +  +  W+   D + +T    E +   V      D   + L VE+      +  
Sbjct: 584 HQLSVRAGENLSWTANSDQLYWT-LGPELYHTSVAEAFNADTESDTLKVENGQNIGFEHD 642

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              P   ++ F        G ++ +++ +
Sbjct: 643 AMIPD-TTVAFV-------GGQVITMNGD 663


>gi|268316601|ref|YP_003290320.1| WD40 domain-containing protein [Rhodothermus marinus DSM 4252]
 gi|262334135|gb|ACY47932.1| WD40 domain-containing protein [Rhodothermus marinus DSM 4252]
          Length = 379

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 55/299 (18%), Positives = 111/299 (37%), Gaps = 33/299 (11%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           ++    + W  I     D I+      +   N         + +G  + +      DG  
Sbjct: 66  RYLVFQSDWAAINPQGCDQIFLMRADGRPLANGERY---RLLSTGKGRTTCAYFLPDG-R 121

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           + Y +         P     + +  +  YD  D   +Y+ DT     P+ +         
Sbjct: 122 VLYASTHAAGPECPPVQRTAEGRYVWPVYDTYD---IYITDT-TGAEPELLIGGPGYDAE 177

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              S +G+  + +  +   ++++  DLQ+    +LT+ L  +  A +SPD S+IV+ + R
Sbjct: 178 ATVSPDGRYVVFTSSRTGDLELWRYDLQTGELLQLTHELGYDGGAFFSPDGSKIVWRASR 237

Query: 323 EGK-------------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                                   L+V  ++GS+ +R+ Q    S + P + P G+ I F
Sbjct: 238 PTGEAAERYRRLLAQGLVEPTDMDLFVADADGSNPRRVIQL-PGSQWAPYFHPDGERIIF 296

Query: 364 TKFS----GEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSK 417
                   G  F + +++ DG+    +       A P +S  G+ L+F+  ++      
Sbjct: 297 ASNHHTEGGRLFDLFLIRLDGTGLEQITHSGTFDAFPMFSRDGKRLVFASNRNARGEPS 355



 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 94/294 (31%), Gaps = 55/294 (18%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYAT----YDDEDILRVYLMD-----TRIDRAPKR 252
           NIR LT   +       +S + + + + +     + +   +++LM             + 
Sbjct: 46  NIRQLTFGGNNAEAY--WSYDDRYLVFQSDWAAINPQGCDQIFLMRADGRPLANGERYRL 103

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDE--------------------AMDIYSVDLQSN 292
           +   +       F  +G+    S                           DIY  D    
Sbjct: 104 LSTGKGRTTCAYFLPDGRVLYASTHAAGPECPPVQRTAEGRYVWPVYDTYDIYITDTTGA 163

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             E L      +  A+ SPD   +VF S R G  +L+       +  +++ +        
Sbjct: 164 EPELLIGGPGYDAEATVSPDGRYVVFTSSRTGDLELWRYDLQTGELLQLTHEL-GYDGGA 222

Query: 353 VWSPQGDLIAFTKFSGEK-------------------FAIGVMKKDGSQERLLVE-DSNL 392
            +SP G  I +                            + V   DGS  R +++   + 
Sbjct: 223 FFSPDGSKIVWRASRPTGEAAERYRRLLAQGLVEPTDMDLFVADADGSNPRRVIQLPGSQ 282

Query: 393 QAPTWSPSGRSLIFSRKKD--GDTGSKLYSIDLNGRN-ETLINTPAYASDPQWV 443
            AP + P G  +IF+      G     L+ I L+G   E + ++  + + P + 
Sbjct: 283 WAPYFHPDGERIIFASNHHTEGGRLFDLFLIRLDGTGLEQITHSGTFDAFPMFS 336



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 74/286 (25%), Gaps = 58/286 (20%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +L  P  +PN    A A     D LR       +     R   F        +S + + 
Sbjct: 11  SLLIVPACTPNSSPPAEAYDPASDSLR---FPGEVHLRNIRQLTFGGNNAEAYWSYDDRY 67

Query: 272 ALI-----SVQKDEAMDIYSVDLQSNAT------ERLTNTLFINISASYSPDSSQIVFES 320
            +      ++       I+ +               L+        A + PD   +   +
Sbjct: 68  LVFQSDWAAINPQGCDQIFLMRADGRPLANGERYRLLSTGKGRTTCAYFLPDGRVLYAST 127

Query: 321 DREG--------------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              G                       +Y+  + G++ + +         +   SP G  
Sbjct: 128 HAAGPECPPVQRTAEGRYVWPVYDTYDIYITDTTGAEPELLI-GGPGYDAEATVSPDGRY 186

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD-------- 411
           + FT        +        +   L  +        +SP G  +++   +         
Sbjct: 187 VVFTSSRTGDLELWRYDLQTGELLQLTHELGYDGGAFFSPDGSKIVWRASRPTGEAAERY 246

Query: 412 ---------GDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVGFMD 447
                      T   L+  D +G N   +I  P      QW  +  
Sbjct: 247 RRLLAQGLVEPTDMDLFVADADGSNPRRVIQLPGS----QWAPYFH 288


>gi|119773170|ref|YP_925910.1| amidohydrolase [Shewanella amazonensis SB2B]
 gi|119765670|gb|ABL98240.1| conserved hypothetical amidohydrolase [Shewanella amazonensis SB2B]
          Length = 1062

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 47/199 (23%), Positives = 77/199 (38%), Gaps = 25/199 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK  +  +  D    IY +  +    E L + +   +   YSPD   I F SD++
Sbjct: 56  SLSPDGKYIVFDLLGD----IYRIPAKGGEAEVLASGIAWQMQPVYSPDGKYIAFTSDQD 111

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKK 378
           G + L+VM ++G + + ++++       P WSP    +          S     + +   
Sbjct: 112 GGDNLWVMDADGKNPRAVTKETFRLINSPAWSPDSQYLVGRKHFTASRSLGAGEVWLYHI 171

Query: 379 DGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLYSI----D 422
            G +   L E  N Q     P +SP GR + FS+            D+ + +Y I     
Sbjct: 172 SGGEGVQLTERPNDQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVAGIYKIKRYDT 231

Query: 423 LNGRNETLINTPAYASDPQ 441
             G  E LI     A  P 
Sbjct: 232 QTGEIEVLIEGTGGAIRPT 250



 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/235 (20%), Positives = 97/235 (41%), Gaps = 33/235 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + + +      DI R+           + + +  +  + P +S +GK    +  +D
Sbjct: 58  SPDGKYIVFDLL--GDIYRI----PAKGGEAEVLASGIAWQMQPVYSPDGKYIAFTSDQD 111

Query: 280 EAMDIYSVDLQSNATERLTNTLF--INISASYSPDSSQIV----FESDRE-GKEQLYVMQ 332
              +++ +D        +T   F  IN S ++SPDS  +V    F + R  G  ++++  
Sbjct: 112 GGDNLWVMDADGKNPRAVTKETFRLIN-SPAWSPDSQYLVGRKHFTASRSLGAGEVWLYH 170

Query: 333 SNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVMK 377
            +G +  ++++         +P +SP G  I F++ +                + I    
Sbjct: 171 ISGGEGVQLTERPNDQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVAGIYKIKRYD 230

Query: 378 KDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
               +  +L+E       PT SP G+ L F ++    +   LYS+DL +G  E L
Sbjct: 231 TQTGEIEVLIEGTGGAIRPTPSPDGKKLAFIKRDGFQST--LYSLDLASGAKEKL 283



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 51/298 (17%), Positives = 96/298 (32%), Gaps = 49/298 (16%)

Query: 192 SLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT----- 244
            + +    G     LT  P+  + L EP +SP+ + + ++          Y  D+     
Sbjct: 165 EVWLYHISGGEGVQLTERPNDQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVAGIY 224

Query: 245 ------RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
                       + +       + P  S +GK+     +      +YS+DL S A E+L 
Sbjct: 225 KIKRYDTQTGEIEVLIEGTGGAIRPTPSPDGKKLAFIKRDGFQSTLYSLDLASGAKEKLY 284

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLY-----------------------VMQSNG 335
             L  ++  +++          D+   + L+                         Q + 
Sbjct: 285 GELDRDMQETWAIHGVYPTMAWDKSSNDILFWAKGKIQRLNVSSKKVTEVPFHVKTQLDV 344

Query: 336 SDQKRISQDKEASYFD------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
               R +Q+ +   FD         SP G  + +         + +      +   L   
Sbjct: 345 QPSVRYTQNLDHDNFDVKMLRMAQVSPDGKHVVYEALG----KLWLKSLPEGKVTRLTKL 400

Query: 388 -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            +  +   PTWS  G+ L F+   D D GS L     N +  T+   P    +P +  
Sbjct: 401 DDGISELYPTWSRDGKQLAFTTWTDKDQGSVLVINLGNRKTTTITQVPGKYVEPVFSP 458



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 79/218 (36%), Gaps = 24/218 (11%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +  S      +P +SP+ + +A+ + D +    +++MD               +I +P +
Sbjct: 84  VLASGIAWQMQPVYSPDGKYIAFTS-DQDGGDNLWVMDADGKNPRAVTKETFRLINSPAW 142

Query: 266 SSN-----GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIV 317
           S +     G++   + +   A +++   +      +LT            +YSPD   I 
Sbjct: 143 SPDSQYLVGRKHFTASRSLGAGEVWLYHISGGEGVQLTERPNDQKDLGEPAYSPDGRYIY 202

Query: 318 FESDRE-------------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           F  D               G  ++    +   + + +  +       P  SP G  +AF 
Sbjct: 203 FSQDATPGKTFHYSKDSVAGIYKIKRYDTQTGEIEVLI-EGTGGAIRPTPSPDGKKLAFI 261

Query: 365 KFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSG 401
           K  G +  +  +    G++E+L  E       TW+  G
Sbjct: 262 KRDGFQSTLYSLDLASGAKEKLYGELDRDMQETWAIHG 299



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 61/381 (16%), Positives = 117/381 (30%), Gaps = 76/381 (19%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           +      +  V    +D      ++G  +          A  ++  I   +         
Sbjct: 55  LSLSPDGKYIV----FD------LLGDIYRIPAKGGE--AEVLASGIAWQMQPVYSPDGK 102

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATY 231
            I F S+          L VMD DG N R +T    +++  P +SP+ Q +     +   
Sbjct: 103 YIAFTSDQDGGDN----LWVMDADGKNPRAVTKETFRLINSPAWSPDSQYLVGRKHFTAS 158

Query: 232 DDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALIS----------VQKD 279
                  V+L         +     N +  +  P +S +G+    S            KD
Sbjct: 159 RSLGAGEVWLYHISGGEGVQLTERPNDQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKD 218

Query: 280 ---EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                  I   D Q+   E L       I  + SPD  ++ F      +  LY +     
Sbjct: 219 SVAGIYKIKRYDTQTGEIEVLIEGTGGAIRPTPSPDGKKLAFIKRDGFQSTLYSLDLASG 278

Query: 337 DQKRISQDKEASYFDPVWSPQGDL--IAFTKFSGEKFAIG---VMKKDGSQERLL----- 386
            ++++   +        W+  G    +A+ K S +        + + + S +++      
Sbjct: 279 AKEKL-YGELDRDMQETWAIHGVYPTMAWDKSSNDILFWAKGKIQRLNVSSKKVTEVPFH 337

Query: 387 VEDSNLQAPT---------------------WSPSGRSLIFSRKKDGDTGSKLYSIDL-N 424
           V+      P+                      SP G+ +++      +   KL+   L  
Sbjct: 338 VKTQLDVQPSVRYTQNLDHDNFDVKMLRMAQVSPDGKHVVY------EALGKLWLKSLPE 391

Query: 425 GRNETLINTPAYASD--PQWV 443
           G+   L       S+  P W 
Sbjct: 392 GKVTRLTKLDDGISELYPTWS 412



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 72/201 (35%), Gaps = 21/201 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQK 278
           SP+ + V Y     E + +++L      +  +       +  L P +S +GK+   +   
Sbjct: 370 SPDGKHVVY-----EALGKLWLKSLPEGKVTRLTKLDDGISELYPTWSRDGKQLAFTTWT 424

Query: 279 D-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQL 328
           D +   +  ++L +  T  +T      +   +SP    +V+     G            +
Sbjct: 425 DKDQGSVLVINLGNRKTTTITQVPGKYVEPVFSPTGELLVYRKASGGYITPTTWSNDPGI 484

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y       +  RIS       F P +    + + F + SGE      +  DG ++R    
Sbjct: 485 YKASLKTKENTRISALG----FQPQFGADSNRVYFME-SGETPQFSSINLDGFEKRTHYT 539

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
             +      SP G  L F+ +
Sbjct: 540 SKHATEFRISPDGEQLAFAER 560



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 9/103 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRS 403
            E ++ +   SP G  I F         I  +   G +  +L      Q  P +SP G+ 
Sbjct: 48  NEGTWMNLSLSPDGKYIVFDLLGD----IYRIPAKGGEAEVLASGIAWQMQPVYSPDGKY 103

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
           + F+  +DG  G  L+ +D +G+N   +    +   + P W  
Sbjct: 104 IAFTSDQDG--GDNLWVMDADGKNPRAVTKETFRLINSPAWSP 144



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 67/193 (34%), Gaps = 22/193 (11%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQI 316
           M+   + S +GK  +          ++   L      RLT  +     +  ++S D  Q+
Sbjct: 363 MLRMAQVSPDGKHVVYEA----LGKLWLKSLPEGKVTRLTKLDDGISELYPTWSRDGKQL 418

Query: 317 VFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---- 371
            F +  +  +  + V+         I+Q     Y +PV+SP G+L+ + K SG       
Sbjct: 419 AFTTWTDKDQGSVLVINLGNRKTTTITQV-PGKYVEPVFSPTGELLVYRKASGGYITPTT 477

Query: 372 -----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 I        +   +        P +      + F          +  SI+L+G 
Sbjct: 478 WSNDPGIYKASLKTKENTRISALGFQ--PQFGADSNRVYFMES---GETPQFSSINLDGF 532

Query: 427 NETLINTPAYASD 439
            +    T  +A++
Sbjct: 533 EKRTHYTSKHATE 545


>gi|300114275|ref|YP_003760850.1| WD40 domain-containing protein [Nitrosococcus watsonii C-113]
 gi|299540212|gb|ADJ28529.1| WD40 domain protein beta Propeller [Nitrosococcus watsonii C-113]
          Length = 366

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 104/280 (37%), Gaps = 44/280 (15%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD------- 232
           + +S    +  +++  MD DG N+R ++  +         +P+ Q + YA+         
Sbjct: 79  IFQSTRDDLKCDAIFRMDADGKNVRQVSSGKGVTTCSF-IAPDDQAIIYASTHLAGDQCP 137

Query: 233 -DEDILRVYLMDTRID----------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
              D  + Y+                    R+ +         +S  G + + +  +   
Sbjct: 138 PKPDYSQGYVWPLYEGYDIFRADPEGGNRVRLTDTPGYDAEGVYSPQGDKIIFTSARTGD 197

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------------------R 322
           ++++ +    +  E+LT+    +  A +S D   IV+ +                    R
Sbjct: 198 LELFMMSPDGSEMEQLTDQPGYDGGAFFSRDGQWIVWRASRPEGKALADYQSLLKQGLIR 257

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKK 378
            G+ ++++M        +++ +  A+ F P W P G  I F+       G  F + ++  
Sbjct: 258 PGRLEIFIMNLEERKPIQLTDNGAAN-FGPYWHPDGKHIIFSSNMHNPKGRNFDLFLINV 316

Query: 379 DGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           D  + E++         P +S  G+ L+F+  ++G    +
Sbjct: 317 DTRKIEQITYHPDFDGFPMFSHDGKKLVFASNRNGKVEGE 356



 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 96/268 (35%), Gaps = 44/268 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS + +++ + +  D+             +  +++ + + +      + + +  + +   
Sbjct: 71  FSFDGKELIFQSTRDDLKCDAIFRMDADGKNVRQVSSGKGVTTCSFIAPDDQAIIYASTH 130

Query: 279 --------------------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                                E  DI+  D +     RLT+T   +    YSP   +I+F
Sbjct: 131 LAGDQCPPKPDYSQGYVWPLYEGYDIFRADPEGGNRVRLTDTPGYDAEGVYSPQGDKIIF 190

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------------- 365
            S R G  +L++M  +GS+ ++++ D+        +S  G  I +               
Sbjct: 191 TSARTGDLELFMMSPDGSEMEQLT-DQPGYDGGAFFSRDGQWIVWRASRPEGKALADYQS 249

Query: 366 ------FSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSK- 417
                     +  I +M  +  +   L ++      P W P G+ +IFS       G   
Sbjct: 250 LLKQGLIRPGRLEIFIMNLEERKPIQLTDNGAANFGPYWHPDGKHIIFSSNMHNPKGRNF 309

Query: 418 -LYSIDLNGRN-ETLINTPAYASDPQWV 443
            L+ I+++ R  E +   P +   P + 
Sbjct: 310 DLFLINVDTRKIEQITYHPDFDGFPMFS 337



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 82/263 (31%), Gaps = 40/263 (15%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIA--HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           V   K +    F +        A  H   D         K D++   ++           
Sbjct: 105 VSSGKGVTTCSFIAPDDQAIIYASTHLAGDQ-----CPPKPDYSQGYVWPLYEG------ 153

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             +   D +G N R           E  +SP   K+ + +    D+    +     +   
Sbjct: 154 YDIFRADPEGGN-RVRLTDTPGYDAEGVYSPQGDKIIFTSARTGDLELFMMSPDGSEM-- 210

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKD-------------------EAMDIYSVDLQS 291
           +++ +         FS +G+  +    +                      ++I+ ++L+ 
Sbjct: 211 EQLTDQPGYDGGAFFSRDGQWIVWRASRPEGKALADYQSLLKQGLIRPGRLEIFIMNLEE 270

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEA 347
               +LT+    N    + PD   I+F S+          L+++  +    ++I+   + 
Sbjct: 271 RKPIQLTDNGAANFGPYWHPDGKHIIFSSNMHNPKGRNFDLFLINVDTRKIEQITYHPD- 329

Query: 348 SYFDPVWSPQGDLIAFTKFSGEK 370
               P++S  G  + F      K
Sbjct: 330 FDGFPMFSHDGKKLVFASNRNGK 352



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 68/180 (37%), Gaps = 34/180 (18%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFD 351
             +LT     N  A +S D  +++F+S R+    + ++ M ++G + +++S  K      
Sbjct: 57  LRQLTFG-GQNAEAYFSFDGKELIFQSTRDDLKCDAIFRMDADGKNVRQVSSGK-GVTTC 114

Query: 352 PVWSPQGDLIAFTKFS--------------------GEKFAIGVMKKDGSQERLLVEDSN 391
              +P    I +                         E + I     +G     L +   
Sbjct: 115 SFIAPDDQAIIYASTHLAGDQCPPKPDYSQGYVWPLYEGYDIFRADPEGGNRVRLTDTPG 174

Query: 392 LQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAY------ASDPQWV 443
             A   +SP G  +IF+  + GD   +L+ +  +G   E L + P Y      + D QW+
Sbjct: 175 YDAEGVYSPQGDKIIFTSARTGD--LELFMMSPDGSEMEQLTDQPGYDGGAFFSRDGQWI 232


>gi|18645084|gb|AAL76385.1| conserved hypothetical protein [uncultured marine proteobacterium]
          Length = 1101

 Score =  137 bits (345), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 28/201 (13%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +G R +     D   D+YSV L   +   LT  +  N   ++SPD  +I F SDR+G
Sbjct: 53  VSPDGTRVIF----DMLGDLYSVPLSGGSVTALTEGIEWNFQPTFSPDGKRIAFVSDRDG 108

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF---AIGVMKKD 379
            + ++VM  +GS+  +++ +++ +  +P WSP    IA  K   SG       I +   +
Sbjct: 109 NDNIWVMDIDGSNVTQVTSERKHNLHNPAWSPDSQWIAVRKGTVSGRSIPSGEIWMYHVN 168

Query: 380 GSQERLLVEDSN-------LQAPTWSPSGRSLIFSRK--------KDGDTGSKLYSID-- 422
           G     +V +++       +  P +SP G  L +S+          + D+  ++++I   
Sbjct: 169 GGSGIEVVNNTDGTRAQKSIAEPAFSPDGDYLYYSQDTTSGWVWQYNKDSTGEIFAIRRL 228

Query: 423 --LNGRNETLINTPAYASDPQ 441
               G  +T+   P  A  P 
Sbjct: 229 DLTTGEIDTITGGPGGAVRPT 249



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 92/237 (38%), Gaps = 32/237 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  +V +      D+  V L       +   +         P FS +GKR      +D
Sbjct: 54  SPDGTRVIF--DMLGDLYSVPL----SGGSVTALTEGIEWNFQPTFSPDGKRIAFVSDRD 107

Query: 280 EAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF----ESDRE-GKEQLYVMQS 333
              +I+ +D+  +   ++T+    N+ + ++SPDS  I       S R     ++++   
Sbjct: 108 GNDNIWVMDIDGSNVTQVTSERKHNLHNPAWSPDSQWIAVRKGTVSGRSIPSGEIWMYHV 167

Query: 334 NGSDQKRISQDKEA-----SYFDPVWSPQGDLIAFTK-------------FSGEKFAIGV 375
           NG     +  + +      S  +P +SP GD + +++              +GE FAI  
Sbjct: 168 NGGSGIEVVNNTDGTRAQKSIAEPAFSPDGDYLYYSQDTTSGWVWQYNKDSTGEIFAIRR 227

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +     +   +         PT SP G  L F  K+  D  S +   DL    ET++
Sbjct: 228 LDLTTGEIDTITGGPGGAVRPTPSPDGSKLAFV-KRLPDFNSAIVIRDLTSGMETIV 283



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 82/244 (33%), Gaps = 41/244 (16%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY----ATY 231
           RI FVS+   +      + VMD DG+N+  +T  R   L  P +SP+ Q +A      + 
Sbjct: 99  RIAFVSDRDGNDN----IWVMDIDGSNVTQVTSERKHNLHNPAWSPDSQWIAVRKGTVSG 154

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRS-----MILAPRFSSNGKRALIS----------V 276
                  +++         + + N         I  P FS +G     S           
Sbjct: 155 RSIPSGEIWMYHVNGGSGIEVVNNTDGTRAQKSIAEPAFSPDGDYLYYSQDTTSGWVWQY 214

Query: 277 QKDEAMDIY---SVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQ 332
            KD   +I+    +DL +   + +T      +  + SPD S++ F     +    + +  
Sbjct: 215 NKDSTGEIFAIRRLDLTTGEIDTITGGPGGAVRPTPSPDGSKLAFVKRLPDFNSAIVIRD 274

Query: 333 SNGSDQ----------KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                +          ++ +     +     W P G  + F         I  +  +   
Sbjct: 275 LTSGMETIVYDSLERDEQETAGSHGNTTAFEWLPNGRDLVFWTAG----RIHRLDTETGD 330

Query: 383 ERLL 386
            ++L
Sbjct: 331 TKIL 334



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 55/263 (20%), Positives = 109/263 (41%), Gaps = 38/263 (14%)

Query: 199 DGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           DGA     LT  RD   + P  S + Q+V Y +++D+D+ RV ++ T      + +    
Sbjct: 392 DGAQKPARLTEQRDHFEYWPALSADGQQVVYTSWNDQDLGRVKVV-TAKGGPSRTLVKTP 450

Query: 258 SMILAPRFSSNGKRALISVQKDE---------AMDIYSVDLQSNATERLTNTLFINISAS 308
              + P+FS +G+  +                   IY V  +     ++++        +
Sbjct: 451 GHYVQPKFSPDGEMVVYRKTTGGYLLSPLWSVEPGIYLVKTEGGTPIKISSAGH---HPT 507

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +S D S+++F +  E   +L+ +   G D++ I+Q ++ + +    SP G+ +AFT    
Sbjct: 508 FSADGSRVLFTTRGEKGLELHSVDHMGLDKRVIAQGEKVTSY--AVSPDGNWLAFT---- 561

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT------------WSPSGRSLIFSRKKDGDTGS 416
           E F + VM    + + ++ + +    P             WS   ++L +S       G 
Sbjct: 562 EHFRVYVMPLTITGKPMVAQRAGGAVPVRGVSERAGEFLHWSADSQALRWS------NGP 615

Query: 417 KLYSIDLNGRNETLINTPAYASD 439
            L++ +L     +L      A D
Sbjct: 616 ALFTRNLTDAFTSLAPVDQQADD 638



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/325 (15%), Positives = 109/325 (33%), Gaps = 56/325 (17%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            + P  WR I          +I  E   ++   +    + V   +   L  +   G ++ 
Sbjct: 30  SNPPGPWRDI----------TIETESTTWSFVDVSPDGTRVIFDMLGDLYSVPLSGGSVT 79

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            LT   +   F+P FSP+ +++A+ +  D +   +++MD       +     +  +  P 
Sbjct: 80  ALTEGIE-WNFQPTFSPDGKRIAFVSDRDGN-DNIWVMDIDGSNVTQVTSERKHNLHNPA 137

Query: 265 FSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATERL------TNTLFINISASYSPDS 313
           +S + +        +S +   + +I+   +   +   +      T         ++SPD 
Sbjct: 138 WSPDSQWIAVRKGTVSGRSIPSGEIWMYHVNGGSGIEVVNNTDGTRAQKSIAEPAFSPDG 197

Query: 314 SQIVFESDREGKE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             + +  D                   +  +     +   I+         P  SP G  
Sbjct: 198 DYLYYSQDTTSGWVWQYNKDSTGEIFAIRRLDLTTGEIDTIT-GGPGGAVRPTPSPDGSK 256

Query: 361 IAFTKFSGE-KFAIGVMKKDGSQERLLVED------------SNLQAPTWSPSGRSLIFS 407
           +AF K   +   AI +       E ++ +              N  A  W P+GR L+F 
Sbjct: 257 LAFVKRLPDFNSAIVIRDLTSGMETIVYDSLERDEQETAGSHGNTTAFEWLPNGRDLVFW 316

Query: 408 RKKDGDTGSKLYSIDLNGRNETLIN 432
                 T  +++ +D    +  ++ 
Sbjct: 317 ------TAGRIHRLDTETGDTKILP 335



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 87/241 (36%), Gaps = 24/241 (9%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNG 269
            ++L   + +P      + +      L    +     + P R+   R      P  S++G
Sbjct: 361 SKMLRWAQLTPAGNSAIFGSMGH---LYHSTIREDGAQKPARLTEQRDHFEYWPALSADG 417

Query: 270 KRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--- 325
           ++ + +   D+ +  +  V  +   +  L  T    +   +SPD   +V+     G    
Sbjct: 418 QQVVYTSWNDQDLGRVKVVTAKGGPSRTLVKTPGHYVQPKFSPDGEMVVYRKTTGGYLLS 477

Query: 326 ------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                   +Y++++ G    +IS         P +S  G  + FT    +   +  +   
Sbjct: 478 PLWSVEPGIYLVKTEGGTPIKISSAG----HHPTFSADGSRVLFTTRGEKGLELHSVDHM 533

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           G  +R++ +   + +   SP G  L F+         ++Y + L    + ++   A  + 
Sbjct: 534 GLDKRVIAQGEKVTSYAVSPDGNWLAFTEH------FRVYVMPLTITGKPMVAQRAGGAV 587

Query: 440 P 440
           P
Sbjct: 588 P 588



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 91/274 (33%), Gaps = 42/274 (15%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF- 265
           T           + PN + + +  +    I R+          P ++   + +    RF 
Sbjct: 294 TAGSHGNTTAFEWLPNGRDLVF--WTAGRIHRLDTETGDTKILPIQLSVTKKVRDTVRFP 351

Query: 266 ---SSN---------------GKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINIS 306
              + +               G  A+              D       RLT         
Sbjct: 352 VEVAPDSVDSKMLRWAQLTPAGNSAIFGSMGHLYHSTIREDGA-QKPARLTEQRDHFEYW 410

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + S D  Q+V+ S  +       + +      R        Y  P +SP G+++ + K 
Sbjct: 411 PALSADGQQVVYTSWNDQDLGRVKVVTAKGGPSRTLVKTPGHYVQPKFSPDGEMVVYRKT 470

Query: 367 SGE---------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           +G          +  I ++K +G     +    +   PT+S  G  ++F+ +  G+ G +
Sbjct: 471 TGGYLLSPLWSVEPGIYLVKTEGGTPIKISSAGH--HPTFSADGSRVLFTTR--GEKGLE 526

Query: 418 LYSIDLNGRNETLINTP------AYASDPQWVGF 445
           L+S+D  G ++ +I         A + D  W+ F
Sbjct: 527 LHSVDHMGLDKRVIAQGEKVTSYAVSPDGNWLAF 560



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 51/126 (40%), Gaps = 16/126 (12%)

Query: 329 YVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + + +     + I+ + E  ++     SP G  + F         +  +   G     L 
Sbjct: 27  WDVSNPPGPWRDITIETESTTWSFVDVSPDGTRVIFDMLGD----LYSVPLSGGSVTALT 82

Query: 388 EDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT--------PAYAS 438
           E       PT+SP G+ + F   +DG     ++ +D++G N T + +        PA++ 
Sbjct: 83  EGIEWNFQPTFSPDGKRIAFVSDRDG--NDNIWVMDIDGSNVTQVTSERKHNLHNPAWSP 140

Query: 439 DPQWVG 444
           D QW+ 
Sbjct: 141 DSQWIA 146


>gi|160873141|ref|YP_001552457.1| amidohydrolase [Shewanella baltica OS195]
 gi|160858663|gb|ABX47197.1| amidohydrolase [Shewanella baltica OS195]
 gi|315265366|gb|ADT92219.1| amidohydrolase [Shewanella baltica OS678]
          Length = 1062

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 79/211 (37%), Gaps = 25/211 (11%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +I       +    S +GK  +  +  D    IY + +     + L   +   +   YSP
Sbjct: 46  KIDVSEGTWMNLSVSPDGKNIVFDLLGD----IYQIPVTGGEAKPLAQGIAWQMQPVYSP 101

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKF 366
           D   I F SD +G + +++M ++GS+ + ++Q+       P WSP    +          
Sbjct: 102 DGKHIAFTSDGDGGDNIWIMNADGSNPRTVTQETFRLLNSPAWSPDSQYLVARKHFTASR 161

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDT 414
           S     + +    G +   L E  N Q     P +SP GR + FS+            D+
Sbjct: 162 SLGAGEVWLYHVAGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDS 221

Query: 415 GSKLYSI----DLNGRNETLINTPAYASDPQ 441
            + +Y I       G  E LI     A  P 
Sbjct: 222 VNGIYKIKRYDTQTGDIEILIEGTGGAIRPT 252



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 91/236 (38%), Gaps = 31/236 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + + +      DI ++ +         K +    +  + P +S +GK    +  
Sbjct: 58  SVSPDGKNIVFDLL--GDIYQIPV----TGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSD 111

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVM 331
            D   +I+ ++   +    +T   F +  S ++SPDS  +V    F + R  G  ++++ 
Sbjct: 112 GDGGDNIWIMNADGSNPRTVTQETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLY 171

Query: 332 QSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVM 376
              G +  ++++         +P +SP G  I F++                  + I   
Sbjct: 172 HVAGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRY 231

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
                   +L+E       PT SP G  L + ++   D  S LY +DL +G    L
Sbjct: 232 DTQTGDIEILIEGTGGAIRPTPSPDGTKLAYIKRD--DFNSSLYLLDLKSGETTKL 285



 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 76/202 (37%), Gaps = 21/202 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQK 278
           SP+  KVA+     E + +++L      +  +       +  L P++S +GK  + +   
Sbjct: 372 SPDGSKVAF-----EALGKIWLKSLPDGKMSRLTELNNGIEELYPQWSRDGKNIVFTTWN 426

Query: 279 D-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQL 328
           D +   +  +  +    ++LT+     +  ++SPD   +V+   + G            L
Sbjct: 427 DQDQGTVQVISAKGGKPKQLTSEPGKYVEPTFSPDGELVVYRKTQGGNLTPRTWSQEPGL 486

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLV 387
           Y +   G    +IS D   + F        D + F      E   +  +  DG  +R+  
Sbjct: 487 YKVDIKGKQNMKISADGYQAQFG----ANADRVFFMNSSEDETPQLSSINLDGFDKRVHY 542

Query: 388 EDSNLQAPTWSPSGRSLIFSRK 409
              +      SP G  L F+ +
Sbjct: 543 SSKHATEFRVSPDGEQLAFAER 564



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 75/458 (16%), Positives = 150/458 (32%), Gaps = 87/458 (18%)

Query: 37  KVATNSANYSPVSIAFT--------------KFVSIDELGGKVSEVVSKDLQRSDVFNLI 82
           ++        P++                   F S  + G  +  +++ D          
Sbjct: 76  QIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGDGGDNIW-IMNAD---------- 124

Query: 83  SQDSFKQKITNPD-SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
              S  + +T     +     W S  +Q LV  +     +     E  L+ V   +   G
Sbjct: 125 --GSNPRTVTQETFRLLNSPAW-SPDSQYLVARKHFTASRSLGAGEVWLYHVAGGE---G 178

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
            K    P   + +         + I   + D   +    S+  V+GI K  +   D    
Sbjct: 179 VKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYK--IKRYDTQTG 236

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---- 257
           +I  L       +  P  SP+  K+AY   DD +   +YL+D +     K  G       
Sbjct: 237 DIEILIEGTGGAI-RPTPSPDGTKLAYIKRDDFNS-SLYLLDLKSGETTKLFGELDRDMQ 294

Query: 258 ------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASY 309
                  +     ++ + K      +      I  +++ S     +  ++     +  S 
Sbjct: 295 ETWAIHGVYPTMAWTQDNKDIFFWAKG----KINRLNIASKTLTDIPFSVKTELAVQPSV 350

Query: 310 ---------------------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA- 347
                                SPD S++ FE+      ++++         R+++     
Sbjct: 351 RFKQDIDKDVFEVKMLRMAQVSPDGSKVAFEA----LGKIWLKSLPDGKMSRLTELNNGI 406

Query: 348 SYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
               P WS  G  I FT ++  ++  + V+   G + + L  E      PT+SP G  ++
Sbjct: 407 EELYPQWSRDGKNIVFTTWNDQDQGTVQVISAKGGKPKQLTSEPGKYVEPTFSPDGELVV 466

Query: 406 FSRKKDGDTGSK-------LYSIDLNGRNETLINTPAY 436
           + + + G+   +       LY +D+ G+    I+   Y
Sbjct: 467 YRKTQGGNLTPRTWSQEPGLYKVDIKGKQNMKISADGY 504



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 101/322 (31%), Gaps = 49/322 (15%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQK 225
               D    +     +    +    + +    G     LT  P+  + L EP +SP+ + 
Sbjct: 143 AWSPDSQYLVARKHFTASRSLGAGEVWLYHVAGGEGVKLTERPNDQKDLGEPAYSPDGRY 202

Query: 226 VAYATYDDEDILRVYLMDT-----------RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           + ++  D       Y  D+                 + +       + P  S +G +   
Sbjct: 203 IYFSQDDTPGKTFHYSKDSVNGIYKIKRYDTQTGDIEILIEGTGGAIRPTPSPDGTKLAY 262

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY----- 329
             + D    +Y +DL+S  T +L   L  ++  +++           ++ K+  +     
Sbjct: 263 IKRDDFNSSLYLLDLKSGETTKLFGELDRDMQETWAIHGVYPTMAWTQDNKDIFFWAKGK 322

Query: 330 ------------------VMQSNGSDQKRISQDKEASYFD------PVWSPQGDLIAFTK 365
                               +       R  QD +   F+         SP G  +AF  
Sbjct: 323 INRLNIASKTLTDIPFSVKTELAVQPSVRFKQDIDKDVFEVKMLRMAQVSPDGSKVAFEA 382

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  I +      +   L E +N      P WS  G++++F+   D D G+      
Sbjct: 383 LG----KIWLKSLPDGKMSRLTELNNGIEELYPQWSRDGKNIVFTTWNDQDQGTVQVISA 438

Query: 423 LNGRNETLINTPAYASDPQWVG 444
             G+ + L + P    +P +  
Sbjct: 439 KGGKPKQLTSEPGKYVEPTFSP 460



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 42/103 (40%), Gaps = 9/103 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRS 403
            E ++ +   SP G  I F         I  +   G + + L +    Q  P +SP G+ 
Sbjct: 50  SEGTWMNLSVSPDGKNIVFDLLGD----IYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKH 105

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
           + F+   DGD G  ++ ++ +G N   +    +   + P W  
Sbjct: 106 IAFTS--DGDGGDNIWIMNADGSNPRTVTQETFRLLNSPAWSP 146


>gi|217971231|ref|YP_002355982.1| amidohydrolase [Shewanella baltica OS223]
 gi|217496366|gb|ACK44559.1| amidohydrolase [Shewanella baltica OS223]
          Length = 1062

 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 79/211 (37%), Gaps = 25/211 (11%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +I       +    S +GK  +  +  D    IY + +     + L   +   +   YSP
Sbjct: 46  KIDVSEGTWMNLSVSPDGKNIVFDLLGD----IYQIPVTGGEAKPLAQGIAWQMQPVYSP 101

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKF 366
           D   I F SD +G + +++M ++GS+ + ++Q+       P WSP    +          
Sbjct: 102 DGKHIAFTSDGDGGDNIWIMDADGSNPRTVTQETFRLLNSPAWSPDSQYLVARKHFTASR 161

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDT 414
           S     + +    G +   L E  N Q     P +SP GR + FS+            D+
Sbjct: 162 SLGAGEVWLYHVAGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDS 221

Query: 415 GSKLYSI----DLNGRNETLINTPAYASDPQ 441
            + +Y I       G  E LI     A  P 
Sbjct: 222 VNGIYKIKRYDTQTGDIEILIEGTGGAIRPT 252



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 91/236 (38%), Gaps = 31/236 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + + +      DI ++ +         K +    +  + P +S +GK    +  
Sbjct: 58  SVSPDGKNIVFDLL--GDIYQIPV----TGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSD 111

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVM 331
            D   +I+ +D   +    +T   F +  S ++SPDS  +V    F + R  G  ++++ 
Sbjct: 112 GDGGDNIWIMDADGSNPRTVTQETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLY 171

Query: 332 QSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVM 376
              G +  ++++         +P +SP G  I F++                  + I   
Sbjct: 172 HVAGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRY 231

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
                   +L+E       PT SP G  L + ++   D  S LY +DL +G    L
Sbjct: 232 DTQTGDIEILIEGTGGAIRPTPSPDGTKLAYIKRD--DFNSSLYLLDLKSGETTKL 285



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 97/313 (30%), Gaps = 60/313 (19%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATYDDEDILRV 239
              G   +++ +MD DG+N R +T    ++L  P +SP+ Q +     +          V
Sbjct: 109 TSDGDGGDNIWIMDADGSNPRTVTQETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEV 168

Query: 240 YLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALISV-------------QKDEAMDI 284
           +L         K     N +  +  P +S +G+    S                +    I
Sbjct: 169 WLYHVAGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKI 228

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--- 341
              D Q+   E L       I  + SPD +++ +    +    LY++     +  ++   
Sbjct: 229 KRYDTQTGDIEILIEGTGGAIRPTPSPDGTKLAYIKRDDFNSSLYLLDLKSGETTKLFGE 288

Query: 342 -------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                  +      Y    W+     I F    G+   + V  K  +     V+      
Sbjct: 289 LDRDMQETWAIHGVYPTMAWTLDNKDIFFWA-KGKINRLNVASKTLTDIPFSVKTELAVQ 347

Query: 395 PT---------------------WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
           P+                      SP G  + F      +   K++   L +G+   L  
Sbjct: 348 PSVRFKQDIDKDVFDVKMLRMAQVSPDGSKVAF------EALGKIWLKSLPDGKMSRLTE 401

Query: 433 TPAYASD--PQWV 443
                 +  PQW 
Sbjct: 402 LNNGIEELYPQWS 414



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 84/254 (33%), Gaps = 25/254 (9%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +      +   +   +  +   G   + L         +P +SP+ + +A+ 
Sbjct: 51  EGTWMNLSVSPDGKNIVFDLLGDIYQIPVTGGEAKPLAQG-IAWQMQPVYSPDGKHIAFT 109

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           + D +    +++MD               ++ +P +S + +  +     +  +   A ++
Sbjct: 110 S-DGDGGDNIWIMDADGSNPRTVTQETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEV 168

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESD-------------REGKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 169 WLYHVAGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKI 228

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
               +   D + I  +       P  SP G  +A+ K      ++ ++     +   L  
Sbjct: 229 KRYDTQTGDIE-ILIEGTGGAIRPTPSPDGTKLAYIKRDDFNSSLYLLDLKSGETTKLFG 287

Query: 388 EDSNLQAPTWSPSG 401
           E       TW+  G
Sbjct: 288 ELDRDMQETWAIHG 301



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 103/322 (31%), Gaps = 49/322 (15%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQK 225
               D    +     +    +    + +    G     LT  P+  + L EP +SP+ + 
Sbjct: 143 AWSPDSQYLVARKHFTASRSLGAGEVWLYHVAGGEGVKLTERPNDQKDLGEPAYSPDGRY 202

Query: 226 VAYATYDDEDILRVYLMDT-----------RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           + ++  D       Y  D+                 + +       + P  S +G +   
Sbjct: 203 IYFSQDDTPGKTFHYSKDSVNGIYKIKRYDTQTGDIEILIEGTGGAIRPTPSPDGTKLAY 262

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS--SQIVFESDRE-----GKEQ 327
             + D    +Y +DL+S  T +L   L  ++  +++       + +  D +      K +
Sbjct: 263 IKRDDFNSSLYLLDLKSGETTKLFGELDRDMQETWAIHGVYPTMAWTLDNKDIFFWAKGK 322

Query: 328 LYVMQSNGSDQK----------------RISQDKEASYFD------PVWSPQGDLIAFTK 365
           +  +                        R  QD +   FD         SP G  +AF  
Sbjct: 323 INRLNVASKTLTDIPFSVKTELAVQPSVRFKQDIDKDVFDVKMLRMAQVSPDGSKVAFEA 382

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  I +      +   L E +N      P WS  G++++F+   D D G+      
Sbjct: 383 LG----KIWLKSLPDGKMSRLTELNNGIEELYPQWSRDGKNIVFTTWNDQDQGTVQVISA 438

Query: 423 LNGRNETLINTPAYASDPQWVG 444
             G+ + L + P    +P +  
Sbjct: 439 KGGKPKQLTSEPGKYEEPTFSP 460



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 63/432 (14%), Positives = 141/432 (32%), Gaps = 88/432 (20%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQ--------RSD----VFNLI 82
            + +        P              G K++ +   D          +S     +F  +
Sbjct: 239 EILIEGTGGAIRPTP---------SPDGTKLAYIKRDDFNSSLYLLDLKSGETTKLFGEL 289

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVL--VTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
            +D   Q+      +     W      +     G++     +RL V          K + 
Sbjct: 290 DRDM--QETWAIHGVYPTMAWTLDNKDIFFWAKGKI-----NRLNV--------ASKTLT 334

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII-----KNSLCV 195
              F        + +     DI      +K  F+ ++L +++    G          + +
Sbjct: 335 DIPFSVKTELAVQPSVRFKQDI------DKDVFDVKMLRMAQVSPDGSKVAFEALGKIWL 388

Query: 196 -MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
               DG   R    +       P++S + + + + T++D+D   V ++  +    PK++ 
Sbjct: 389 KSLPDGKMSRLTELNNGIEELYPQWSRDGKNIVFTTWNDQDQGTVQVISAK-GGKPKQLT 447

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEA---------MDIYSVDLQSNATERLTNTLFINI 305
           +       P FS +G+  +    +              +Y VD++    +++        
Sbjct: 448 SEPGKYEEPTFSPDGELVVYRKTQGGNLTPRTWSQEPGLYKVDIKGKQNKKI---SADGY 504

Query: 306 SASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            A +  ++ ++ F  S  +   QL  +  +G D KR+    + +  +   SP G  +AF 
Sbjct: 505 QAQFGANADRVFFMNSSEDETPQLSSINLDGFD-KRVHYSSKHA-TEFRVSPDGGQLAFA 562

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------------TWSPSGRSLIFSRKKDG 412
               E+F + V       E + +  +    P            +W+     L ++     
Sbjct: 563 ----ERFKVWVTPFAKHGETVEIGPNANNLPVSQLSIRAGESISWNSKSNQLYWT----- 613

Query: 413 DTGSKLYSIDLN 424
             G +LY   ++
Sbjct: 614 -LGPELYQAKVD 624



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 70/184 (38%), Gaps = 20/184 (10%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQI 316
           M+   + S +G +            I+   L      RLT  N     +   +S D   I
Sbjct: 365 MLRMAQVSPDGSKVAFEA----LGKIWLKSLPDGKMSRLTELNNGIEELYPQWSRDGKNI 420

Query: 317 VFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---- 371
           VF +  +  +  + V+ + G   K+++ +    Y +P +SP G+L+ + K  G       
Sbjct: 421 VFTTWNDQDQGTVQVISAKGGKPKQLTSE-PGKYEEPTFSPDGELVVYRKTQGGNLTPRT 479

Query: 372 -----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +  +   G Q + +  D       +  +   + F      D   +L SI+L+G 
Sbjct: 480 WSQEPGLYKVDIKGKQNKKISADGYQA--QFGANADRVFFM-NSSEDETPQLSSINLDGF 536

Query: 427 NETL 430
           ++ +
Sbjct: 537 DKRV 540


>gi|116620277|ref|YP_822433.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223439|gb|ABJ82148.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 880

 Score =  137 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 63/360 (17%), Positives = 122/360 (33%), Gaps = 64/360 (17%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
            +  S R++AH I+   Y                V+    S      L  +       R 
Sbjct: 413 GAGGSERQVAH-IAPLTYLFGILPLAWTADGKWLVAPDKPSTAGPFELTAISVQTGEKRR 471

Query: 206 LTPSRDQIL--FEPRFSPNQQKVAYATYDDEDILRVYLMD----TRIDRAPKRIGNFRSM 259
           +T     ++    PR SP+ + +A+       +  V+             PKR+ +    
Sbjct: 472 VTHPPSGVIGDLLPRVSPDGRNLAFLRVSAFSVADVFTQPMTFALNAVAEPKRLTSVGWS 531

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFI--------------- 303
           I A  +S + +  L++ ++  +  ++ V  +Q      +T+   +               
Sbjct: 532 ITALMWSGDSRNLLVAAEQGGSHRLWRVSPVQPGKPVPVTSLPSVGVQVATSAKGDRLVY 591

Query: 304 ---------------------------------NISASYSPDSSQIVFESDREGKEQLYV 330
                                             ++A  SPD S+I F SDR G  +++V
Sbjct: 592 IQTSLDIDIYRQDLPQAGEKPPPSVRLISSTRTEMNARISPDGSKIAFPSDRTGSWEIWV 651

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVED 389
             SNG    R++         P WS     IAF         + V++  G + R L+   
Sbjct: 652 AASNGEHPVRLTSFGAGETGTPRWSADSRQIAFDARVRGNAEVYVVEASGGKPRPLVTGS 711

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-----YASDPQWVG 444
           ++   P+WS  G+ + F   + G    +++ + + G     +          ++D +WV 
Sbjct: 712 ADNFGPSWSHDGKWVYFISNRLGQ--EQVWKMPVAGGPAIQLTHGGAVCGFESTDGKWVY 769



 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 87/229 (37%), Gaps = 12/229 (5%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP--SRDQILFEPRFS 220
            Q  T  KGD   R++++  S+   I +  L    + G          S  +     R S
Sbjct: 578 VQVATSAKGD---RLVYIQTSLDIDIYRQDL---PQAGEKPPPSVRLISSTRTEMNARIS 631

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+  K+A+ +        +++  +  +   +           PR+S++ ++     +   
Sbjct: 632 PDGSKIAFPSDRTGS-WEIWVAASNGEHPVRLTSFGAGETGTPRWSADSRQIAFDARVRG 690

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             ++Y V+        L      N   S+S D   + F S+R G+EQ++ M   G    +
Sbjct: 691 NAEVYVVEASGGKPRPLVTGSADNFGPSWSHDGKWVYFISNRLGQEQVWKMPVAGGPAIQ 750

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++       F+   S  G  +  T+   +  +I  +  DG  E  LVE 
Sbjct: 751 LTHGGAVCGFE---STDGKWVYVTRAYEQPTSIWRVPADGGDEVKLVEG 796



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 91/238 (38%), Gaps = 25/238 (10%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P FSP+  ++AY    D +   ++L       AP R+       + P +S +G++     
Sbjct: 344 PAFSPDGSRIAYVWKPDREEPGIFLRVISQTSAPVRLTTGG---VNPVWSPDGRQLAFIR 400

Query: 277 QKDEAMDIYSVDLQSNATER------LTNTLFINISASYSPDSSQIVFESDRE--GKEQL 328
           ++     I  +D    +  +      LT    I +  +++ D   +V        G  +L
Sbjct: 401 REPSRFSILLIDGAGGSERQVAHIAPLTYLFGI-LPLAWTADGKWLVAPDKPSTAGPFEL 459

Query: 329 YVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSG-------EKFAIGVMKKD 379
             +     +++R++        D  P  SP G  +AF + S         +     +   
Sbjct: 460 TAISVQTGEKRRVTHPPSGVIGDLLPRVSPDGRNLAFLRVSAFSVADVFTQPMTFALNAV 519

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNETLINTPA 435
              +RL     ++ A  WS   R+L+ + ++ G    +L+ +     G+   + + P+
Sbjct: 520 AEPKRLTSVGWSITALMWSGDSRNLLVAAEQGGS--HRLWRVSPVQPGKPVPVTSLPS 575



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 64/192 (33%), Gaps = 15/192 (7%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           A +          +          +     +   P FS +G R     + D       + 
Sbjct: 310 AAFWFGRTASSPGIPAETAPKLMPLITEPGLKSGPAFSPDGSRIAYVWKPDREEPGIFLR 369

Query: 289 L--QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +  Q++A  RLT      ++  +SPD  Q+ F      +  + ++   G  +++++    
Sbjct: 370 VISQTSAPVRLTTGG---VNPVWSPDGRQLAFIRREPSRFSILLIDGAGGSERQVAHIAP 426

Query: 347 ASYFDP----VWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDS----NLQAPT 396
            +Y        W+  G  +       +   F +  +     ++R +            P 
Sbjct: 427 LTYLFGILPLAWTADGKWLVAPDKPSTAGPFELTAISVQTGEKRRVTHPPSGVIGDLLPR 486

Query: 397 WSPSGRSLIFSR 408
            SP GR+L F R
Sbjct: 487 VSPDGRNLAFLR 498



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 12/146 (8%)

Query: 297 LTNTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           L     +    ++SPD S+I +    DRE       + S  S   R++        +PVW
Sbjct: 334 LITEPGLKSGPAFSPDGSRIAYVWKPDREEPGIFLRVISQTSAPVRLTTGG----VNPVW 389

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERL------LVEDSNLQAPTWSPSGRSLIFSR 408
           SP G  +AF +    +F+I ++   G  ER       L     +    W+  G+ L+   
Sbjct: 390 SPDGRQLAFIRREPSRFSILLIDGAGGSERQVAHIAPLTYLFGILPLAWTADGKWLVAPD 449

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTP 434
           K       +L +I +    +  +  P
Sbjct: 450 KPSTAGPFELTAISVQTGEKRRVTHP 475



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 68/240 (28%), Gaps = 53/240 (22%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S+I F S+   S      + V   +G +   LT         PR+S + +++A+      
Sbjct: 635 SKIAFPSDRTGS----WEIWVAASNGEHPVRLTSFGAGETGTPRWSADSRQIAF-DARVR 689

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFS---------------------------- 266
               VY+++      P+ +    +    P +S                            
Sbjct: 690 GNAEVYVVE-ASGGKPRPLVTGSADNFGPSWSHDGKWVYFISNRLGQEQVWKMPVAGGPA 748

Query: 267 --------------SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                         ++GK   ++   ++   I+ V        +L   +   +  +Y   
Sbjct: 749 IQLTHGGAVCGFESTDGKWVYVTRAYEQPTSIWRVPADGGDEVKLVEGVGQPL--TYEVI 806

Query: 313 SSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            S I F    S+      +           R++            SP    IAF   +  
Sbjct: 807 ESGIYFLRRKSEESPAPGVMFYSFATQQLTRVADLDRPFSVGMSVSPDRRWIAFASPANS 866


>gi|304412719|ref|ZP_07394322.1| amidohydrolase [Shewanella baltica OS183]
 gi|307305816|ref|ZP_07585562.1| amidohydrolase [Shewanella baltica BA175]
 gi|304348929|gb|EFM13344.1| amidohydrolase [Shewanella baltica OS183]
 gi|306911309|gb|EFN41735.1| amidohydrolase [Shewanella baltica BA175]
          Length = 1062

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 75/199 (37%), Gaps = 25/199 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK  +  +  D    IY + +       L   +   +   YSPD   I F SD +
Sbjct: 58  SISPDGKHVVFDLLGD----IYQIPVSGGEARPLAQGIAWQMQPVYSPDGKHIAFTSDGD 113

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKK 378
           G + +++M ++GS+ + ++Q+       P WSP    +          S     + +   
Sbjct: 114 GGDNIWLMDADGSNPRTVTQETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHV 173

Query: 379 DGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLYSI----D 422
            G +   L E  N Q     P +SP GR + FS+            D+ + +Y I     
Sbjct: 174 AGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRYDT 233

Query: 423 LNGRNETLINTPAYASDPQ 441
             G  E LI     A  P 
Sbjct: 234 QTGDIEILIEGTGGAIRPT 252



 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 91/236 (38%), Gaps = 31/236 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + V +      DI ++ +         + +    +  + P +S +GK    +  
Sbjct: 58  SISPDGKHVVFDLL--GDIYQIPV----SGGEARPLAQGIAWQMQPVYSPDGKHIAFTSD 111

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVM 331
            D   +I+ +D   +    +T   F +  S ++SPDS  +V    F + R  G  ++++ 
Sbjct: 112 GDGGDNIWLMDADGSNPRTVTQETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLY 171

Query: 332 QSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVM 376
              G +  ++++         +P +SP G  I F++                  + I   
Sbjct: 172 HVAGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRY 231

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
                   +L+E       PT SP G  L + ++   D  S LY +DL +G    L
Sbjct: 232 DTQTGDIEILIEGTGGAIRPTPSPDGTKLAYIKRD--DFNSSLYLLDLKSGETTKL 285



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 77/202 (38%), Gaps = 21/202 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQK 278
           SP+  KVA+     E + +++L      +  +       +  L P++S +GK  + +   
Sbjct: 372 SPDGSKVAF-----EALGKIWLKSLPDGKMSRLTELNNGIEELYPQWSRDGKNIVFTTWN 426

Query: 279 D-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQL 328
           D +   +  +  +    ++LT+     +  ++SPD   +V+   + G            L
Sbjct: 427 DQDQGTVQVISAKGGKPKQLTSEPGKYVEPTFSPDGELVVYRKTQGGNLTPRTWSQEPGL 486

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLV 387
           Y +   G   K+IS D   + F        D + F      E   +  +  DG  +R+  
Sbjct: 487 YKVDIKGKQNKKISADGYQAQFG----ANADRVFFMNSSEDETPQLSSINLDGFDKRVHY 542

Query: 388 EDSNLQAPTWSPSGRSLIFSRK 409
              +      SP G  L F+ +
Sbjct: 543 SSKHATEFRVSPDGEQLAFAER 564



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 90/270 (33%), Gaps = 36/270 (13%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +      V   +   +  +   G   R L         +P +SP+ + +A+ 
Sbjct: 51  EGTWMNLSISPDGKHVVFDLLGDIYQIPVSGGEARPLAQG-IAWQMQPVYSPDGKHIAFT 109

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           + D +    ++LMD               ++ +P +S + +  +     +  +   A ++
Sbjct: 110 S-DGDGGDNIWLMDADGSNPRTVTQETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEV 168

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESD-------------REGKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 169 WLYHVAGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKI 228

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   D + I  +       P  SP G  +A+ K      ++ ++     +   L  
Sbjct: 229 KRYDTQTGDIE-ILIEGTGGAIRPTPSPDGTKLAYIKRDDFNSSLYLLDLKSGETTKLFG 287

Query: 389 --DSNLQA--------PT--WSPSGRSLIF 406
             D ++Q         PT  W+   + + F
Sbjct: 288 ELDRDMQETWAIHGVYPTMAWTQDNKDIFF 317



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 67/381 (17%), Positives = 131/381 (34%), Gaps = 59/381 (15%)

Query: 99  RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI 158
               W S  +Q LV  +     +     E  L+ V   +   G K    P   + +    
Sbjct: 140 NSPAW-SPDSQYLVARKHFTASRSLGAGEVWLYHVAGGE---GVKLTERPNDQKDLGEPA 195

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
                + I   + D   +    S+  V+GI K  +   D    +I  L       +  P 
Sbjct: 196 YSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYK--IKRYDTQTGDIEILIEGTGGAI-RPT 252

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR----------SMILAPRFSSN 268
            SP+  K+AY   DD +   +YL+D +     K  G              +     ++ +
Sbjct: 253 PSPDGTKLAYIKRDDFNS-SLYLLDLKSGETTKLFGELDRDMQETWAIHGVYPTMAWTQD 311

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASY----------------- 309
            K      +      I  +++ +     +  ++     +  S                  
Sbjct: 312 NKDIFFWAKG----KINRLNVANKTLTDIPFSVKTELAVQPSVRFKQDIDKDVFEVKMLR 367

Query: 310 ----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFT 364
               SPD S++ FE+      ++++         R+++         P WS  G  I FT
Sbjct: 368 MAQVSPDGSKVAFEA----LGKIWLKSLPDGKMSRLTELNNGIEELYPQWSRDGKNIVFT 423

Query: 365 KFSG-EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK----- 417
            ++  ++  + V+   G + + L  E      PT+SP G  +++ + + G+   +     
Sbjct: 424 TWNDQDQGTVQVISAKGGKPKQLTSEPGKYVEPTFSPDGELVVYRKTQGGNLTPRTWSQE 483

Query: 418 --LYSIDLNGRNETLINTPAY 436
             LY +D+ G+    I+   Y
Sbjct: 484 PGLYKVDIKGKQNKKISADGY 504



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 101/322 (31%), Gaps = 49/322 (15%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQK 225
               D    +     +    +    + +    G     LT  P+  + L EP +SP+ + 
Sbjct: 143 AWSPDSQYLVARKHFTASRSLGAGEVWLYHVAGGEGVKLTERPNDQKDLGEPAYSPDGRY 202

Query: 226 VAYATYDDEDILRVYLMDT-----------RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           + ++  D       Y  D+                 + +       + P  S +G +   
Sbjct: 203 IYFSQDDTPGKTFHYSKDSVNGIYKIKRYDTQTGDIEILIEGTGGAIRPTPSPDGTKLAY 262

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY----- 329
             + D    +Y +DL+S  T +L   L  ++  +++           ++ K+  +     
Sbjct: 263 IKRDDFNSSLYLLDLKSGETTKLFGELDRDMQETWAIHGVYPTMAWTQDNKDIFFWAKGK 322

Query: 330 ------------------VMQSNGSDQKRISQDKEASYFD------PVWSPQGDLIAFTK 365
                               +       R  QD +   F+         SP G  +AF  
Sbjct: 323 INRLNVANKTLTDIPFSVKTELAVQPSVRFKQDIDKDVFEVKMLRMAQVSPDGSKVAFEA 382

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  I +      +   L E +N      P WS  G++++F+   D D G+      
Sbjct: 383 LG----KIWLKSLPDGKMSRLTELNNGIEELYPQWSRDGKNIVFTTWNDQDQGTVQVISA 438

Query: 423 LNGRNETLINTPAYASDPQWVG 444
             G+ + L + P    +P +  
Sbjct: 439 KGGKPKQLTSEPGKYVEPTFSP 460



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 40/103 (38%)

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIF----------------------------------- 406
           Q ++ V +      + SP G+ ++F                                   
Sbjct: 44  QVKIDVNEGTWMNLSISPDGKHVVFDLLGDIYQIPVSGGEARPLAQGIAWQMQPVYSPDG 103

Query: 407 ---SRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
              +   DGD G  ++ +D +G N   +    +   + P W  
Sbjct: 104 KHIAFTSDGDGGDNIWLMDADGSNPRTVTQETFRLLNSPAWSP 146


>gi|332304917|ref|YP_004432768.1| amidohydrolase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172246|gb|AEE21500.1| amidohydrolase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 1114

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 56/259 (21%), Positives = 96/259 (37%), Gaps = 34/259 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R  P     A             +++   D     I    +   +   S +GK+ +    
Sbjct: 24  RVEPQDSMPATHEEKSNKEPEWDVLNPPFDLHEVSISTDETTWSSLDVSPDGKQFVF--- 80

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D   DIY   +     + LT     NI  ++SPD S+I F SDR+G   ++VM S+GS+
Sbjct: 81  -DMLGDIYVSPIAGGEAKSLTQDFAWNIQPTFSPDGSKIAFISDRDGLSNVWVMNSDGSN 139

Query: 338 QKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKKDGSQERLL------ 386
             +++ +K      P WSP G  I       +  S     I +    G    ++      
Sbjct: 140 LVQVTDEKNNLIHSPKWSPDGQYIVANKGIMSSRSIPAGEIWLYHHSGGDGMVIKKRVHG 199

Query: 387 -VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-----------LYSIDLN-GRNETLINT 433
             +  N+  P +SP G+ L +++     +              +   DLN G  E  I+ 
Sbjct: 200 NPDQKNIADPAFSPDGKYLYYTQDVSPGSTFDYNRDPLKSIFAIARYDLNTGEEERYISG 259

Query: 434 ------PAYASDPQWVGFM 446
                 P  + D + + F+
Sbjct: 260 TGGAVVPTPSPDGKHIAFI 278



 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/288 (18%), Positives = 107/288 (37%), Gaps = 37/288 (12%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            ++ ++    GD  SR+    +S+ +   + S    + D  N  +          E  +S
Sbjct: 9   ALFGAMFSLSGDALSRVE-PQDSMPATHEEKSNKEPEWDVLNPPFDLHEVSISTDETTWS 67

Query: 221 -----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
                P+ ++  +    D     +Y+         K +    +  + P FS +G +    
Sbjct: 68  SLDVSPDGKQFVFDMLGD-----IYVSPI-AGGEAKSLTQDFAWNIQPTFSPDGSKIAFI 121

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIV-----FESDREGKEQLY 329
             +D   +++ ++   +   ++T+     I S  +SPD   IV       S      +++
Sbjct: 122 SDRDGLSNVWVMNSDGSNLVQVTDEKNNLIHSPKWSPDGQYIVANKGIMSSRSIPAGEIW 181

Query: 330 VMQSNGSD----QKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEK-------------F 371
           +   +G D    +KR+  + +  +  DP +SP G  + +T+                  F
Sbjct: 182 LYHHSGGDGMVIKKRVHGNPDQKNIADPAFSPDGKYLYYTQDVSPGSTFDYNRDPLKSIF 241

Query: 372 AIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           AI     +  +E R +        PT SP G+ + F R+    TG  +
Sbjct: 242 AIARYDLNTGEEERYISGTGGAVVPTPSPDGKHIAFIRRVKNKTGLFI 289



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 63/363 (17%), Positives = 123/363 (33%), Gaps = 99/363 (27%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------- 227
           S+I F+S+        +++ VM+ DG+N+  +T  ++ ++  P++SP+ Q +        
Sbjct: 116 SKIAFISDRDG----LSNVWVMNSDGSNLVQVTDEKNNLIHSPKWSPDGQYIVANKGIMS 171

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILA-PRFSSNGKRALIS---------- 275
             +    +I   +          KR+ GN     +A P FS +GK    +          
Sbjct: 172 SRSIPAGEIWLYHHSGGDGMVIKKRVHGNPDQKNIADPAFSPDGKYLYYTQDVSPGSTFD 231

Query: 276 VQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +D    I+++   DL +   ER  +     +  + SPD   I F    + K  L++  
Sbjct: 232 YNRDPLKSIFAIARYDLNTGEEERYISGTGGAVVPTPSPDGKHIAFIRRVKNKTGLFIKN 291

Query: 333 SNGSDQKRIS----------QDKEASYFDPVWSPQGDLIAF------------------- 363
                +  +              E  +    W P    I F                   
Sbjct: 292 IATGIETPLYLALERDMQEGFGSEGYFPYFDWMPDSKSIVFWTAGKFHALDVKTQAIKDI 351

Query: 364 -----------------TKFSGEKFAIGVMK-----KDGS------------------QE 383
                               + + F I + +      DG                   + 
Sbjct: 352 PVSVKASVKYADAVRFDVDVAPDTFDIKMARWAQKSPDGKSILFQALGKLYVKDIKSGKA 411

Query: 384 RLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDP 440
           + L    D +   P +S  G+ ++F+   D   GS + ++  +GR+E +I T P +  +P
Sbjct: 412 KRLTRQNDHDEYYPRYSHDGKKIVFTTWSDETLGS-VRTVSASGRSEKVITTEPGHYIEP 470

Query: 441 QWV 443
            + 
Sbjct: 471 SFS 473



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 90/253 (35%), Gaps = 39/253 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + V    G   + LT        +P FSP+  K+A+ + D + +  V++M++      +
Sbjct: 85  DIYVSPIAGGEAKSLTQDF-AWNIQPTFSPDGSKIAFIS-DRDGLSNVWVMNSDGSNLVQ 142

Query: 252 RIGNFRSMILAPRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNA---TERLTNTLFI 303
                 ++I +P++S +G+  +     +S +   A +I+            ++  +    
Sbjct: 143 VTDEKNNLIHSPKWSPDGQYIVANKGIMSSRSIPAGEIWLYHHSGGDGMVIKKRVHGNPD 202

Query: 304 N---ISASYSPDSSQIV----------FESDREGKEQLY---VMQSNGSDQKRISQDKEA 347
                  ++SPD   +           F+ +R+  + ++       N  +++R       
Sbjct: 203 QKNIADPAFSPDGKYLYYTQDVSPGSTFDYNRDPLKSIFAIARYDLNTGEEERYISGTGG 262

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV------------EDSNLQAP 395
           +   P  SP G  IAF +    K  + +       E  L              +      
Sbjct: 263 AVV-PTPSPDGKHIAFIRRVKNKTGLFIKNIATGIETPLYLALERDMQEGFGSEGYFPYF 321

Query: 396 TWSPSGRSLIFSR 408
            W P  +S++F  
Sbjct: 322 DWMPDSKSIVFWT 334



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/265 (18%), Positives = 94/265 (35%), Gaps = 44/265 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS------MILAP--------R 264
           + P+ + + + T      L V     +      +     +      + +AP        R
Sbjct: 323 WMPDSKSIVFWTAGKFHALDVKTQAIKDIPVSVKASVKYADAVRFDVDVAPDTFDIKMAR 382

Query: 265 F---SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES 320
           +   S +GK  L          +Y  D++S   +RLT           YS D  +IVF +
Sbjct: 383 WAQKSPDGKSILFQA----LGKLYVKDIKSGKAKRLTRQNDHDEYYPRYSHDGKKIVFTT 438

Query: 321 DREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---------K 370
             +     +  + ++G  +K I+ +    Y +P +S    LI + K +G          +
Sbjct: 439 WSDETLGSVRTVSASGRSEKVITTE-PGHYIEPSFSTDDKLITYNKKTGGYLLAPEYSVE 497

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD--TGSKLYSIDLNGRNE 428
             I V    G   + + +     AP ++     +  +    G      +L S+DLNG ++
Sbjct: 498 PGIYVASSKGKNHKRVAKKGA--APHFAGDNSRVYITESVAGSDYPEQQLVSVDLNGEDK 555

Query: 429 TLINTPAY-------ASDPQWVGFM 446
                          + D +W+ F+
Sbjct: 556 REHLYGGDKIAEYRLSPDKKWIAFV 580



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 79/211 (37%), Gaps = 27/211 (12%)

Query: 218 RF---SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           R+   SP+ + + +         ++Y+ D +  +A +           PR+S +GK+ + 
Sbjct: 382 RWAQKSPDGKSILFQALG-----KLYVKDIKSGKAKRLTRQNDHDEYYPRYSHDGKKIVF 436

Query: 275 SVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-------- 325
           +   DE +  + +V     + + +T      I  S+S D   I +     G         
Sbjct: 437 TTWSDETLGSVRTVSASGRSEKVITTEPGHYIEPSFSTDDKLITYNKKTGGYLLAPEYSV 496

Query: 326 -EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKF---AIGVMKKDG 380
              +YV  S G + KR+++   A    P ++     +  T   +G  +    +  +  +G
Sbjct: 497 EPGIYVASSKGKNHKRVAKKGAA----PHFAGDNSRVYITESVAGSDYPEQQLVSVDLNG 552

Query: 381 SQERL-LVEDSNLQAPTWSPSGRSLIFSRKK 410
             +R  L     +     SP  + + F  + 
Sbjct: 553 EDKREHLYGGDKIAEYRLSPDKKWIAFVYQY 583



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 94/280 (33%), Gaps = 39/280 (13%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-----NSLCVMDRDGANIRYLTPSRD 211
             +D +   +      F+ ++   ++    G          L V D      + LT   D
Sbjct: 360 KYADAVRFDVDVAPDTFDIKMARWAQKSPDGKSILFQALGKLYVKDIKSGKAKRLTRQND 419

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              + PR+S + +K+ + T+ DE +  V  + +   R+ K I       + P FS++ K 
Sbjct: 420 HDEYYPRYSHDGKKIVFTTWSDETLGSVRTV-SASGRSEKVITTEPGHYIEPSFSTDDKL 478

Query: 272 ALISVQKDE---------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              + +               IY    +    +R+        +  ++ D+S++      
Sbjct: 479 ITYNKKTGGYLLAPEYSVEPGIYVASSKGKNHKRVAKKGA---APHFAGDNSRVYITESV 535

Query: 323 EGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            G     +QL  +  NG D++      +    +   SP    IAF       +   V   
Sbjct: 536 AGSDYPEQQLVSVDLNGEDKREHLYGGD-KIAEYRLSPDKKWIAFVYQ----YKAYVAPF 590

Query: 379 DGSQERLLVEDSNLQAP------------TWSPSGRSLIF 406
               +R  +  S+   P            TW    +++ +
Sbjct: 591 TEIGQRQDIGPSSTTIPIKQLSDRAGEYLTWHSDSQTVSW 630


>gi|146291120|ref|YP_001181544.1| amidohydrolase [Shewanella putrefaciens CN-32]
 gi|145562810|gb|ABP73745.1| amidohydrolase [Shewanella putrefaciens CN-32]
          Length = 1062

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 74/199 (37%), Gaps = 25/199 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK  +  +  D    IY + +     + L   +   +   YSPD   I F SD +
Sbjct: 58  SVSPDGKHIVFDLLGD----IYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGD 113

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKK 378
           G + +++M ++G   + ++++       P WSP    +          S     + +   
Sbjct: 114 GGDNIWIMDADGKKPRTVTKETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHV 173

Query: 379 DGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLYSI----D 422
            G +   L E  N +     P +SP GR + FS+            D+ + +Y I     
Sbjct: 174 TGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRYDT 233

Query: 423 LNGRNETLINTPAYASDPQ 441
             G  E LI     A  P 
Sbjct: 234 QTGEIEILIEGTGGAIRPT 252



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 94/251 (37%), Gaps = 31/251 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +      +        SP+ + + +      DI ++ +         K +    +  + 
Sbjct: 43  EQVKVDVNEGTWMNLSVSPDGKHIVFDLL--GDIYQIPV----TGGEAKPLAQGIAWQMQ 96

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV---- 317
           P +S +GK    +   D   +I+ +D        +T   F +  S ++SPDS  +V    
Sbjct: 97  PVYSPDGKHIAFTSDGDGGDNIWIMDADGKKPRTVTKETFRLLNSPAWSPDSQYLVARKH 156

Query: 318 FESDRE-GKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS------- 367
           F + R  G  ++++    G +  +++   + E    +P +SP G  I F++         
Sbjct: 157 FTASRSLGAGEVWLYHVTGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFH 216

Query: 368 ------GEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                    + I        +  +L+E       PT SP G  L + ++   D  S LY 
Sbjct: 217 YSKDSVNGIYKIKRYDTQTGEIEILIEGTGGAIRPTPSPDGTKLAYIKRD--DFQSSLYL 274

Query: 421 IDL-NGRNETL 430
           +DL +G    L
Sbjct: 275 LDLKSGETTKL 285



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 92/270 (34%), Gaps = 36/270 (13%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +      +   +   +  +   G   + L         +P +SP+ + +A+ 
Sbjct: 51  EGTWMNLSVSPDGKHIVFDLLGDIYQIPVTGGEAKPLAQG-IAWQMQPVYSPDGKHIAFT 109

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           + D +    +++MD    +          ++ +P +S + +  +     +  +   A ++
Sbjct: 110 S-DGDGGDNIWIMDADGKKPRTVTKETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEV 168

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESD-------------REGKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 169 WLYHVTGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKI 228

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   + + I  +       P  SP G  +A+ K    + ++ ++     +   L  
Sbjct: 229 KRYDTQTGEIE-ILIEGTGGAIRPTPSPDGTKLAYIKRDDFQSSLYLLDLKSGETTKLFG 287

Query: 389 --DSNLQA--------PT--WSPSGRSLIF 406
             D ++Q         PT  W+   + + F
Sbjct: 288 ELDRDMQETWAIHGVYPTMAWTQDSKDIFF 317



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 76/202 (37%), Gaps = 21/202 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQK 278
           SP+  KV +     E + +++L      +  +     +++  L P++S +GK  + +   
Sbjct: 372 SPDGSKVTF-----EALGKIWLKSLPDGKMSRLTELDKNIAELYPQWSRDGKNIVFTTWN 426

Query: 279 D-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQL 328
           D +   +  +  +    ++LT+     +  ++SP+   +V+   + G            L
Sbjct: 427 DQDQGTVQVISAKGGKPKQLTSEPGKYVEPTFSPNGELVVYRKTQGGNLTPRTWSQEPGL 486

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLV 387
           Y         K+IS D   + F        D + F      E   +  +  DG  +R+  
Sbjct: 487 YKADLKTKQNKKISSDGYQAQFG----ANADRVFFMNSSEDETPQLSSINLDGFDKRVHY 542

Query: 388 EDSNLQAPTWSPSGRSLIFSRK 409
              +      SP G  L F+ +
Sbjct: 543 SSKHATEFRVSPDGEQLAFAER 564



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 53/322 (16%), Positives = 103/322 (31%), Gaps = 49/322 (15%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQK 225
               D    +     +    +    + +    G     LT  P+ ++ L EP +SP+ + 
Sbjct: 143 AWSPDSQYLVARKHFTASRSLGAGEVWLYHVTGGEGVKLTERPNDEKDLGEPAYSPDGRY 202

Query: 226 VAYATYDDEDILRVYLMDT-----------RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           + ++  D       Y  D+                 + +       + P  S +G +   
Sbjct: 203 IYFSQDDTPGKTFHYSKDSVNGIYKIKRYDTQTGEIEILIEGTGGAIRPTPSPDGTKLAY 262

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY----- 329
             + D    +Y +DL+S  T +L   L  ++  +++           ++ K+  +     
Sbjct: 263 IKRDDFQSSLYLLDLKSGETTKLFGELDRDMQETWAIHGVYPTMAWTQDSKDIFFWAKGK 322

Query: 330 ------------------VMQSNGSDQKRISQDKEASYFD------PVWSPQGDLIAFTK 365
                               +       R  QD +   FD         SP G  + F  
Sbjct: 323 INRLNVANKTLTDIPFSVKTELAVQPSVRFKQDIDKDVFDVKMLRMAQVSPDGSKVTFEA 382

Query: 366 FSGEKFAIGVMK-KDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  I +    DG   RL   D N+    P WS  G++++F+   D D G+      
Sbjct: 383 LG----KIWLKSLPDGKMSRLTELDKNIAELYPQWSRDGKNIVFTTWNDQDQGTVQVISA 438

Query: 423 LNGRNETLINTPAYASDPQWVG 444
             G+ + L + P    +P +  
Sbjct: 439 KGGKPKQLTSEPGKYVEPTFSP 460



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 74/466 (15%), Positives = 146/466 (31%), Gaps = 103/466 (22%)

Query: 37  KVATNSANYSPVSIAFT--------------KFVSIDELGGKVSEVVSKDLQRSDV---- 78
           ++        P++                   F S  + G  +  ++  D          
Sbjct: 76  QIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGDGGDNIW-IMDAD----GKKPRT 130

Query: 79  -----FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
                F L++  ++        +   F    SLGA     G V             L+ V
Sbjct: 131 VTKETFRLLNSPAWSPDSQYLVARKHFTASRSLGA-----GEVW------------LYHV 173

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
              +   G K    P   + +         + I   + D   +    S+  V+GI K   
Sbjct: 174 TGGE---GVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKR 230

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
                       +          P  SP+  K+AY   DD     +YL+D +     K  
Sbjct: 231 YDTQ---TGEIEILIEGTGGAIRPTPSPDGTKLAYIKRDDFQS-SLYLLDLKSGETTKLF 286

Query: 254 GNFR----------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           G              +     ++ + K      +      I  +++ +     +  ++  
Sbjct: 287 GELDRDMQETWAIHGVYPTMAWTQDSKDIFFWAKG----KINRLNVANKTLTDIPFSVKT 342

Query: 304 N--ISASY---------------------SPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              +  S                      SPD S++ FE+      ++++         R
Sbjct: 343 ELAVQPSVRFKQDIDKDVFDVKMLRMAQVSPDGSKVTFEA----LGKIWLKSLPDGKMSR 398

Query: 341 ISQ-DKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV-EDSNLQAPTW 397
           +++ DK  +   P WS  G  I FT ++  ++  + V+   G + + L  E      PT+
Sbjct: 399 LTELDKNIAELYPQWSRDGKNIVFTTWNDQDQGTVQVISAKGGKPKQLTSEPGKYVEPTF 458

Query: 398 SPSGRSLIFSRKKDGDTGSK-------LYSIDLNGRNETLINTPAY 436
           SP+G  +++ + + G+   +       LY  DL  +    I++  Y
Sbjct: 459 SPNGELVVYRKTQGGNLTPRTWSQEPGLYKADLKTKQNKKISSDGY 504



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 30/103 (29%), Gaps = 40/103 (38%)

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIF----------------------------------- 406
           Q ++ V +      + SP G+ ++F                                   
Sbjct: 44  QVKVDVNEGTWMNLSVSPDGKHIVFDLLGDIYQIPVTGGEAKPLAQGIAWQMQPVYSPDG 103

Query: 407 ---SRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
              +   DGD G  ++ +D +G+    +    +   + P W  
Sbjct: 104 KHIAFTSDGDGGDNIWIMDADGKKPRTVTKETFRLLNSPAWSP 146


>gi|300786706|ref|YP_003766997.1| TolB-related protein [Amycolatopsis mediterranei U32]
 gi|299796220|gb|ADJ46595.1| TolB-related protein [Amycolatopsis mediterranei U32]
          Length = 1342

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 55/308 (17%), Positives = 100/308 (32%), Gaps = 58/308 (18%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L  + RDGA       + D +   P  SP+ + VA+A+       R   +     R
Sbjct: 97  RDGELWFL-RDGAPTALQLTNDDAVDLHPALSPDGRTVAFASERTGS--RKLFVIGVDGR 153

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISA 307
             +++ +  +   +P +S +G R   S  +D+ A DIY+V +      RLT     +   
Sbjct: 154 GLRQVTSGPATDDSPSWSPDGTRLAFSSTRDDPAGDIYTVGVDGGTPARLTTDPAADTQP 213

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-- 365
           ++ P  ++I F + R       V+ +        +        +P WSP G  +AFT   
Sbjct: 214 AWGP--ARIAFTTTRFHPAGDVVLMAEAGGAVTRAVPDPGDSSEPAWSPDGR-LAFTTRA 270

Query: 366 ------------------------------------------FSGEKFAIGVMKKDGSQE 383
                                                      +     I      G   
Sbjct: 271 KDPSGDVRQIVGETVTDISALKDIGETEPTFRSDGRPVFTELRASGTTDIWSADAAGGDR 330

Query: 384 RLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLINTPAYA--- 437
           R L     ++   P +S  G  L +++   GD+  +++   + +G     +  P      
Sbjct: 331 RDLTNRPGADEFDPAFSADGSQLAYTQGGRGDSVATEIIVANADGSGPRPLTGPTDGTKR 390

Query: 438 -SDPQWVG 444
              P W  
Sbjct: 391 ERHPAWSP 398



 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 57/298 (19%), Positives = 108/298 (36%), Gaps = 31/298 (10%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T +   ++     ++ S         +  +  DG     LT        +P + P   ++
Sbjct: 164 TDDSPSWSPDGTRLAFSSTRDDPAGDIYTVGVDGGTPARLTTD-PAADTQPAWGPA--RI 220

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A+ T        V LM        + + +       P +S +G+ A  +  KD + D+  
Sbjct: 221 AFTTTRFHPAGDVVLMAEAGGAVTRAVPD-PGDSSEPAWSPDGRLAFTTRAKDPSGDVRQ 279

Query: 287 VDLQSNATERLTNTLFI----NISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRI 341
           +  ++     +T+   +        ++  D  + VF   R  G   ++   + G D++ +
Sbjct: 280 IVGET-----VTDISALKDIGETEPTFRSDG-RPVFTELRASGTTDIWSADAAGGDRRDL 333

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVEDSN----LQA 394
           +    A  FDP +S  G  +A+T+          I V   DGS  R L   ++     + 
Sbjct: 334 TNRPGADEFDPAFSADGSQLAYTQGGRGDSVATEIIVANADGSGPRPLTGPTDGTKRERH 393

Query: 395 PTWSPSGRSLIFSRKKDGDTGS----KLYSIDLNGRNETLINTP----AYASDPQWVG 444
           P WSP   ++ F+    G   S    ++  +  +GR    I  P       S P W  
Sbjct: 394 PAWSPDATAIAFTVTVGGGESSRDVVRIARV-ADGRILGEIPIPPYLSGNDSQPVWSA 450



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 11/172 (6%)

Query: 277 QKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++D  +      L+  A    +LTN   +++  + SPD   + F S+R G  +L+V+  +
Sbjct: 96  ERDGELWF----LRDGAPTALQLTNDDAVDLHPALSPDGRTVAFASERTGSRKLFVIGVD 151

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQE-RLLVEDSNL 392
           G   ++++    A+   P WSP G  +AF+    +    I  +  DG    RL  + +  
Sbjct: 152 GRGLRQVTS-GPATDDSPSWSPDGTRLAFSSTRDDPAGDIYTVGVDGGTPARLTTDPAAD 210

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             P W P    + F+  +    G  +   +  G     +  P  +S+P W  
Sbjct: 211 TQPAWGP--ARIAFTTTRFHPAGDVVLMAEAGGAVTRAVPDPGDSSEPAWSP 260



 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 51/233 (21%), Positives = 86/233 (36%), Gaps = 28/233 (12%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + +  GA  R +    D    EP +SP+  ++A+ T   +    V  +          + 
Sbjct: 236 MAEAGGAVTRAVPDPGDS--SEPAWSPDG-RLAFTTRAKDPSGDVRQIVGETVTDISALK 292

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDS 313
           +       P F S+G+     ++     DI+S D        LTN    +    ++S D 
Sbjct: 293 DIG--ETEPTFRSDGRPVFTELRASGTTDIWSADAAGGDRRDLTNRPGADEFDPAFSADG 350

Query: 314 SQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFSG 368
           SQ+ +     G     ++ V  ++GS  + ++   + +     P WSP    IAFT   G
Sbjct: 351 SQLAYTQGGRGDSVATEIIVANADGSGPRPLTGPTDGTKRERHPAWSPDATAIAFTVTVG 410

Query: 369 EK------FAIGVMKKDGSQERLLVE-------DSNLQAPTWSPSGRSLIFSR 408
                     I  +  DG   R+L E         N   P WS  G  +  +R
Sbjct: 411 GGESSRDVVRIARV-ADG---RILGEIPIPPYLSGNDSQPVWSADGTKVTLTR 459



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 35/104 (33%), Gaps = 7/104 (6%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL----QAPTW 397
           +            SP G  + F     ++  + V   DG + R+LV+  +       P W
Sbjct: 893 TPCGVGRQGSADVSPDGAALVF---QNDRSQLCVAPADGGRARVLVQSGDEGESLNDPAW 949

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           SP G  + +         S L      G    LI+ P  A  P 
Sbjct: 950 SPDGTLVAYDSAFSESVPSILIVPSAGGTPRPLIDGPGGAGQPA 993



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 7/102 (6%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQ 357
            +    SA  SPD + +VF++DR    QL V  ++G   + + Q  +   S  DP WSP 
Sbjct: 896 GVGRQGSADVSPDGAALVFQNDRS---QLCVAPADGGRARVLVQSGDEGESLNDPAWSPD 952

Query: 358 GDLIAF-TKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTW 397
           G L+A+ + FS    +I ++   G   R L++       P +
Sbjct: 953 GTLVAYDSAFSESVPSILIVPSAGGTPRPLIDGPGGAGQPAF 994



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 44/146 (30%), Gaps = 22/146 (15%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF--------------SSNGKRA 272
           A  + D     R  L    +   P  +       L+P F              S +G   
Sbjct: 853 AVVSVDPGGEYRQELWQVALAAGPDSVVPGTQRNLSPSFGTPCGVGRQGSADVSPDGAAL 912

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFES-DREGKEQL 328
           +    +++   +            L  +     S    ++SPD + + ++S   E    +
Sbjct: 913 VF---QNDRSQLCVAPADGGRARVLVQSGDEGESLNDPAWSPDGTLVAYDSAFSESVPSI 969

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVW 354
            ++ S G   + +  D       P +
Sbjct: 970 LIVPSAGGTPRPLI-DGPGGAGQPAF 994



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 3/80 (3%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQ--ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             ++ LCV   DG   R L  S D+   L +P +SP+   VAY +   E +  + ++ + 
Sbjct: 916 NDRSQLCVAPADGGRARVLVQSGDEGESLNDPAWSPDGTLVAYDSAFSESVPSILIVPS- 974

Query: 246 IDRAPKRIGNFRSMILAPRF 265
               P+ + +       P F
Sbjct: 975 AGGTPRPLIDGPGGAGQPAF 994



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 28/91 (30%), Gaps = 3/91 (3%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQK 278
           SP+   + +   +D   L V   D    R   + G+    +  P +S +G      S   
Sbjct: 906 SPDGAALVF--QNDRSQLCVAPADGGRARVLVQSGDEGESLNDPAWSPDGTLVAYDSAFS 963

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASY 309
           +    I  V         L +        ++
Sbjct: 964 ESVPSILIVPSAGGTPRPLIDGPGGAGQPAF 994


>gi|313677004|ref|YP_004055000.1| amidohydrolase [Marivirga tractuosa DSM 4126]
 gi|312943702|gb|ADR22892.1| amidohydrolase [Marivirga tractuosa DSM 4126]
          Length = 1146

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 21/205 (10%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               L+   S +G   L     D   DIYS+        ++T  +  ++   YSPD   I
Sbjct: 52  EGTWLSVDVSPDGSTILF----DMMGDIYSIPFTGGKATKITEGMPYDVHPRYSPDGKSI 107

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF SD+ G + ++ M     + K+I++D   +YF   W+P G+ I   K       + + 
Sbjct: 108 VFISDKSGSDNIWTMDLATEEMKQITKDDNQNYFSADWTPDGEYIIGAKGR-RNIKLHIY 166

Query: 377 KKDGSQERLLVEDSNL---QAPTWSPSGRSLIFSRKKDG------DTGSKLYSIDL-NGR 426
            K+G     L++  +      PT SP G+ L FS++             ++ + D+ +G 
Sbjct: 167 HKEGGSGAQLIDKPDNLKTTDPTVSPDGKLLYFSKRNSAWNYNAQFPQYQIGTYDMEDGD 226

Query: 427 NETLIN------TPAYASDPQWVGF 445
             T+ +      TP  + D +W+ +
Sbjct: 227 MATITSRYGSAFTPTISPDGKWLVY 251



 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 93/228 (40%), Gaps = 20/228 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   + +      DI  +            +I       + PR+S +GK  +    K 
Sbjct: 61  SPDGSTILFDMM--GDIYSIPF----TGGKATKITEGMPYDVHPRYSPDGKSIVFISDKS 114

Query: 280 EAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIV-FESDREGKEQLYVMQSNGSD 337
            + +I+++DL +   +++T     N  SA ++PD   I+  +  R  K  +Y  +  GS 
Sbjct: 115 GSDNIWTMDLATEEMKQITKDDNQNYFSADWTPDGEYIIGAKGRRNIKLHIY-HKEGGSG 173

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------KFAIGVMKK-DGSQERLLVE 388
            + I +       DP  SP G L+ F+K +          ++ IG     DG    +   
Sbjct: 174 AQLIDKPDNLKTTDPTVSPDGKLLYFSKRNSAWNYNAQFPQYQIGTYDMEDGDMATITSR 233

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             +   PT SP G+ L++  + + +TG  L   +L   +E  +  P  
Sbjct: 234 YGSAFTPTISPDGKWLVYGTRFETETG--LVRRNLKTGDEEWLAYPVQ 279



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 57/301 (18%), Positives = 103/301 (34%), Gaps = 45/301 (14%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQI-LFEPRFSPNQQKVAYA----TYDDEDILR 238
              G     L +  ++G +   L    D +   +P  SP+ + + ++     ++      
Sbjct: 154 GAKGRRNIKLHIYHKEGGSGAQLIDKPDNLKTTDPTVSPDGKLLYFSKRNSAWNYNAQFP 213

Query: 239 VYLMDT--RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            Y + T    D     I +       P  S +GK  +   + +    +   +L++   E 
Sbjct: 214 QYQIGTYDMEDGDMATITSRYGSAFTPTISPDGKWLVYGTRFETETGLVRRNLKTGDEEW 273

Query: 297 LTNTLFINISASYSPDSSQIV--FESDR-----EGKEQLYVMQSNGSDQKRISQDKE--- 346
           L   +  +   S +P        F  D          +++ +  N      I  + +   
Sbjct: 274 LAYPVQRDEQESIAPLGVYPAMSFTPDSKFLIATYGGKIHKIDINAKTASEIPFEVDLKL 333

Query: 347 --------------------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                                   D V SP G  +AFT  +     + VM       + L
Sbjct: 334 ELGPRLKFEYPISDEKEAFVTQIRDGVPSPDGSKLAFTALN----RLYVMDLPNGDPKRL 389

Query: 387 VEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE--TLINTPAYASDPQWV 443
            +    +A P WSP G  ++FS  ++ + G  LY I+ NGR +   L   PA   DP+W 
Sbjct: 390 TKHKFTEAMPAWSPDGSQIVFSTWEEKEGG-HLYKINSNGRGKAVKLTQNPALYLDPEWS 448

Query: 444 G 444
            
Sbjct: 449 Y 449



 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 91/287 (31%), Gaps = 32/287 (11%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            ++G + S  +    S +   +   +  +   G     +T         PR+SP+ + + 
Sbjct: 50  TKEGTWLSVDVSPDGSTILFDMMGDIYSIPFTGGKATKITEG-MPYDVHPRYSPDGKSIV 108

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           + + D      ++ MD   +   +   +      +  ++ +G+   I  +    + ++  
Sbjct: 109 FIS-DKSGSDNIWTMDLATEEMKQITKDDNQNYFSADWTPDGEYI-IGAKGRRNIKLHIY 166

Query: 288 DLQSNATERLTNTLFI--NISASYSPDSSQIVFESDREGKE--------QLYVMQSNGSD 337
             +  +  +L +          + SPD   + F                Q+        D
Sbjct: 167 HKEGGSGAQLIDKPDNLKTTDPTVSPDGKLLYFSKRNSAWNYNAQFPQYQIGTYDMEDGD 226

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-------- 389
              I+  +  S F P  SP G  + +      +  +         E  L           
Sbjct: 227 MATITS-RYGSAFTPTISPDGKWLVYGTRFETETGLVRRNLKTGDEEWLAYPVQRDEQES 285

Query: 390 ----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                   A +++P  + LI         G K++ ID+N +  + I 
Sbjct: 286 IAPLGVYPAMSFTPDSKFLI------ATYGGKIHKIDINAKTASEIP 326



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 69/178 (38%), Gaps = 23/178 (12%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREG 324
           S +G +   +        +Y +DL +   +RLT   F     ++SPD SQIVF   + + 
Sbjct: 362 SPDGSKLAFTA----LNRLYVMDLPNGDPKRLTKHKFTEAMPAWSPDGSQIVFSTWEEKE 417

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------- 371
              LY + SNG  +        A Y DP WS   + I F + + + +             
Sbjct: 418 GGHLYKINSNGRGKAVKLTQNPALYLDPEWSYTKNRIVFNRGANQVYKDAIDPFGSLMME 477

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            +  +  DG +  L+ +      P +S     +  +    G     L SI  +G +E 
Sbjct: 478 DLAWISADGGKVTLIDKAKGRSTPHFSKVSDRIYLNHGSKG-----LISIRWDGTDEK 530



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 101/310 (32%), Gaps = 79/310 (25%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIK----NSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I+ EK  F ++I     S     +     N L VMD    + + LT  +      P +SP
Sbjct: 345 ISDEKEAFVTQIRDGVPSPDGSKLAFTALNRLYVMDLPNGDPKRLTKHK-FTEAMPAWSP 403

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  ++ ++T+++++   +Y +++       ++    ++ L P +S    R + +   ++ 
Sbjct: 404 DGSQIVFSTWEEKEGGHLYKINSNGRGKAVKLTQNPALYLDPEWSYTKNRIVFNRGANQV 463

Query: 282 M-------------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----EG 324
                         D+  +         +      +    +S         SDR     G
Sbjct: 464 YKDAIDPFGSLMMEDLAWISADGGKVTLIDKAKGRST-PHFSK-------VSDRIYLNHG 515

Query: 325 KEQLYVMQSNGSDQK---RIS--------------QDKEASYFDP--------------- 352
            + L  ++ +G+D+K   +++               D   +                   
Sbjct: 516 SKGLISIRWDGTDEKEHLQLTGITTYGSSIDMIHAHDGSHNILPGDEKAWRENNKASKPS 575

Query: 353 --VWSPQGD----------LIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTW 397
               SP G+                  G+   I + K D +     +L V     + P W
Sbjct: 576 EIRISPNGETALAKINNDVYSVTIPKYGQTPKISLAKADNAAFPAMKLTVMGG--EFPAW 633

Query: 398 SPSGRSLIFS 407
           S   + + +S
Sbjct: 634 SGDSKKIHWS 643


>gi|157959840|ref|YP_001499874.1| amidohydrolase [Shewanella pealeana ATCC 700345]
 gi|157844840|gb|ABV85339.1| amidohydrolase [Shewanella pealeana ATCC 700345]
          Length = 1066

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 80/211 (37%), Gaps = 25/211 (11%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +I       +    S NGK  +  +  D    IY + +     + L   +   +   YSP
Sbjct: 43  KIEVDEGTWMNVSVSPNGKHVVFDLLGD----IYQMPIAGGEAKPLAKGIAWQMQPVYSP 98

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FT-KF 366
           D   I F SD +G + ++VMQ++GS+ + ++++       P WSP G  +     FT   
Sbjct: 99  DGKYIAFTSDEDGGDNIWVMQADGSNPRPVTKETFRLLNSPAWSPDGQYLVARKHFTGSR 158

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDT 414
           S     + +    G     L E  N Q     P +SP G  + FS+            D+
Sbjct: 159 SLGAGEVWMYHVAGGDGVKLTERPNEQKDLGEPAYSPDGHYIYFSQDSTPGKTFHYSKDS 218

Query: 415 GSKLYSI----DLNGRNETLINTPAYASDPQ 441
              +Y I       G  E LI     A  P 
Sbjct: 219 VKGIYKIKRYDTQTGDIEVLIQGTGGAIRPT 249



 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 91/236 (38%), Gaps = 31/236 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN + V +    D     +Y M        K +    +  + P +S +GK    +  
Sbjct: 55  SVSPNGKHVVFDLLGD-----IYQMPI-AGGEAKPLAKGIAWQMQPVYSPDGKYIAFTSD 108

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVM 331
           +D   +I+ +    +    +T   F +  S ++SPD   +V    F   R  G  ++++ 
Sbjct: 109 EDGGDNIWVMQADGSNPRPVTKETFRLLNSPAWSPDGQYLVARKHFTGSRSLGAGEVWMY 168

Query: 332 QSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVM 376
              G D  +++   +++    +P +SP G  I F++ S                + I   
Sbjct: 169 HVAGGDGVKLTERPNEQKDLGEPAYSPDGHYIYFSQDSTPGKTFHYSKDSVKGIYKIKRY 228

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
                   +L++       PT SP G  L + ++      S LY +DL +G  E L
Sbjct: 229 DTQTGDIEVLIQGTGGAIRPTPSPDGNKLAYIKRDG--FQSSLYLLDLKSGETEKL 282



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 100/286 (34%), Gaps = 38/286 (13%)

Query: 159 SDDIYQSITGE--KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           +D   + I  E  +G + +  +  +   V   +   +  M   G   + L         +
Sbjct: 35  ADAPLEQIKIEVDEGTWMNVSVSPNGKHVVFDLLGDIYQMPIAGGEAKPLAKG-IAWQMQ 93

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--- 273
           P +SP+ + +A+ + +D       +     +  P     FR +  +P +S +G+  +   
Sbjct: 94  PVYSPDGKYIAFTSDEDGGDNIWVMQADGSNPRPVTKETFRLLN-SPAWSPDGQYLVARK 152

Query: 274 -ISVQKD-EAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDRE----- 323
             +  +   A +++   +      +LT            +YSPD   I F  D       
Sbjct: 153 HFTGSRSLGAGEVWMYHVAGGDGVKLTERPNEQKDLGEPAYSPDGHYIYFSQDSTPGKTF 212

Query: 324 --------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                   G  ++    +   D + + Q    +   P  SP G+ +A+ K  G + ++ +
Sbjct: 213 HYSKDSVKGIYKIKRYDTQTGDIEVLIQGTGGAIR-PTPSPDGNKLAYIKRDGFQSSLYL 271

Query: 376 MKKDGSQERLLVE--DSNLQA--------P--TWSPSGRSLIFSRK 409
           +     +   L    D ++Q         P  +W+     ++F   
Sbjct: 272 LDLKSGETEKLYGELDRDMQETWAIHGVYPTMSWTTDNNEILFWAN 317



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 86/200 (43%), Gaps = 19/200 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +KVA+       I    L D ++ R  K   + R   L P++S +GK+ + +   D
Sbjct: 369 SPDGKKVAFEAL--GKIWVKSLPDGKMSRLTKLDSDLR--ELFPQWSRDGKKVVFTTWDD 424

Query: 280 EAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQLY 329
           +     S+ ++++   + LT+     +  ++SPD   +V+   + G            LY
Sbjct: 425 QEQGTVSLANVRNKRVKVLTDEPGKYVEPTFSPDGETVVYRKAKGGYITPRTWSQETGLY 484

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +  +G    +I+       + P +    D + F + SGE   +  +  +G ++R+    
Sbjct: 485 QVDIDGDKNTKITSAG----YQPQFGADNDRVYFME-SGETPQLASIGLNGFEKRVHYTS 539

Query: 390 SNLQAPTWSPSGRSLIFSRK 409
            +      SP G+ L F+ +
Sbjct: 540 KHATEFRVSPDGKQLAFAER 559



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 54/301 (17%), Positives = 105/301 (34%), Gaps = 53/301 (17%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             S  S      +   D    +I  L       +  P  SP+  K+AY   D      +Y
Sbjct: 213 HYSKDSVKGIYKIKRYDTQTGDIEVLIQGTGGAI-RPTPSPDGNKLAYIKRD-GFQSSLY 270

Query: 241 LMDTRIDRAPKRIGNFR----------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           L+D +     K  G              +     ++++    L          I  +D++
Sbjct: 271 LLDLKSGETEKLYGELDRDMQETWAIHGVYPTMSWTTDNNEILFWA----NGKINKLDVE 326

Query: 291 SNATERL----------------TNTLFINIS-------ASYSPDSSQIVFESDREGKEQ 327
           S +  ++                T  L  ++        A  SPD  ++ FE+      +
Sbjct: 327 SKSVAQIPFTIKTERAIQPAVRFTQDLDKDVFDVKMLRMAQVSPDGKKVAFEA----LGK 382

Query: 328 LYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERL 385
           ++V         R+++ D +     P WS  G  + FT +   E+  + +      + ++
Sbjct: 383 IWVKSLPDGKMSRLTKLDSDLRELFPQWSRDGKKVVFTTWDDQEQGTVSLANVRNKRVKV 442

Query: 386 LVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSK-------LYSIDLNGRNETLINTPAYA 437
           L +       PT+SP G ++++ + K G    +       LY +D++G   T I +  Y 
Sbjct: 443 LTDEPGKYVEPTFSPDGETVVYRKAKGGYITPRTWSQETGLYQVDIDGDKNTKITSAGYQ 502

Query: 438 S 438
            
Sbjct: 503 P 503



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 112/289 (38%), Gaps = 44/289 (15%)

Query: 169 EKGDFNSRILFVSESVVSGII-----KNSLCV-MDRDGANIRYLTPSRDQILFEPRFSPN 222
           +K  F+ ++L +++    G          + V    DG   R      D     P++S +
Sbjct: 354 DKDVFDVKMLRMAQVSPDGKKVAFEALGKIWVKSLPDGKMSRLTKLDSDLRELFPQWSRD 413

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +KV + T+DD++   V L + R ++  K + +     + P FS +G+  +    K   +
Sbjct: 414 GKKVVFTTWDDQEQGTVSLANVR-NKRVKVLTDEPGKYVEPTFSPDGETVVYRKAKGGYI 472

Query: 283 D---------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                     +Y VD+  +   ++T+  +      +  D+ ++ F  +     QL  +  
Sbjct: 473 TPRTWSQETGLYQVDIDGDKNTKITSAGY---QPQFGADNDRVYFM-ESGETPQLASIGL 528

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           NG +++     K A+ F    SP G  +AF     E+F + V       E + +      
Sbjct: 529 NGFEKRVHYTSKHATEF--RVSPDGKQLAFA----ERFKVFVTPFAKHGETIKIGPKASN 582

Query: 394 AP------------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            P            +W+     L ++       G +LY ++++ + +  
Sbjct: 583 LPVEQLSVRAGESISWNTDSNQLYWT------LGPELYQVNVDTQYQQQ 625



 Score = 37.3 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 30/71 (42%), Gaps = 13/71 (18%)

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TP 434
           Q ++ V++      + SP+G+ ++F      D    +Y + + G     +         P
Sbjct: 41  QIKIEVDEGTWMNVSVSPNGKHVVF------DLLGDIYQMPIAGGEAKPLAKGIAWQMQP 94

Query: 435 AYASDPQWVGF 445
            Y+ D +++ F
Sbjct: 95  VYSPDGKYIAF 105


>gi|40063481|gb|AAR38281.1| amidohydrolase domain protein [uncultured marine bacterium 581]
          Length = 1101

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 28/201 (13%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +G R +     D   D+YSV L   +   LT  +  N   ++SPD  +I F SDR+G
Sbjct: 53  VSPDGTRVIF----DMLGDLYSVPLSGGSVTALTEGIEWNFQPTFSPDGKRIAFVSDRDG 108

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF---AIGVMKKD 379
            + ++VM  +G++  +++ +++ +  +P WSP    IA  K   SG       I +   +
Sbjct: 109 NDNIWVMDIDGTNVTQVTSERKHNLHNPAWSPDSQWIAVRKGTVSGRSIPSGEIWMYHVN 168

Query: 380 GSQERLLVEDSN-------LQAPTWSPSGRSLIFSRK--------KDGDTGSKLYSID-- 422
           G     +V +++       +  P +SP G  L +S+          + D+  ++++I   
Sbjct: 169 GGSGIEVVNNTDGTRAQKSIAEPAFSPDGDYLYYSQDTTSGWVWQYNKDSTGEIFAIRRL 228

Query: 423 --LNGRNETLINTPAYASDPQ 441
               G  +T+   P  A  P 
Sbjct: 229 DLTTGEIDTITGGPGGAVRPT 249



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 91/237 (38%), Gaps = 32/237 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  +V +      D+  V L       +   +         P FS +GKR      +D
Sbjct: 54  SPDGTRVIF--DMLGDLYSVPL----SGGSVTALTEGIEWNFQPTFSPDGKRIAFVSDRD 107

Query: 280 EAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF----ESDRE-GKEQLYVMQS 333
              +I+ +D+      ++T+    N+ + ++SPDS  I       S R     ++++   
Sbjct: 108 GNDNIWVMDIDGTNVTQVTSERKHNLHNPAWSPDSQWIAVRKGTVSGRSIPSGEIWMYHV 167

Query: 334 NGSDQKRISQDKEA-----SYFDPVWSPQGDLIAFTK-------------FSGEKFAIGV 375
           NG     +  + +      S  +P +SP GD + +++              +GE FAI  
Sbjct: 168 NGGSGIEVVNNTDGTRAQKSIAEPAFSPDGDYLYYSQDTTSGWVWQYNKDSTGEIFAIRR 227

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +     +   +         PT SP G  L F  K+  D  S +   DL    ET++
Sbjct: 228 LDLTTGEIDTITGGPGGAVRPTPSPDGSKLAFV-KRLPDFNSAIVIRDLTSGMETIV 283



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 81/244 (33%), Gaps = 41/244 (16%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY----ATY 231
           RI FVS+   +      + VMD DG N+  +T  R   L  P +SP+ Q +A      + 
Sbjct: 99  RIAFVSDRDGNDN----IWVMDIDGTNVTQVTSERKHNLHNPAWSPDSQWIAVRKGTVSG 154

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRS-----MILAPRFSSNGKRALIS----------V 276
                  +++         + + N         I  P FS +G     S           
Sbjct: 155 RSIPSGEIWMYHVNGGSGIEVVNNTDGTRAQKSIAEPAFSPDGDYLYYSQDTTSGWVWQY 214

Query: 277 QKDEAMDIY---SVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQ 332
            KD   +I+    +DL +   + +T      +  + SPD S++ F     +    + +  
Sbjct: 215 NKDSTGEIFAIRRLDLTTGEIDTITGGPGGAVRPTPSPDGSKLAFVKRLPDFNSAIVIRD 274

Query: 333 SNGSDQ----------KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                +          ++ +     +     W P G  + F         I  +  +   
Sbjct: 275 LTSGMETIVYDSLERDEQETAGSHGNTTAFEWLPNGRDLVFWTAG----RIHRLDTETGD 330

Query: 383 ERLL 386
            ++L
Sbjct: 331 TKIL 334



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/263 (20%), Positives = 109/263 (41%), Gaps = 38/263 (14%)

Query: 199 DGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           DGA     LT  RD   + P  S + Q+V Y +++D+++ RV ++  +     + +    
Sbjct: 392 DGAQKPARLTEQRDHFEYWPALSADGQQVVYTSWNDQNLGRVKVVSAK-GGPSRTLVKTP 450

Query: 258 SMILAPRFSSNGKRALISVQKDE---------AMDIYSVDLQSNATERLTNTLFINISAS 308
              + P+FS +G+  +                   IY V  +     ++++        +
Sbjct: 451 GHYVQPKFSPDGEMVVYRKTTGGYLLSPLWSVEPGIYLVKTEGGTPIKISSAGH---HPT 507

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +S D S+++F +  E   +L+ +   G D++ I+Q ++ + +    SP G+ +AFT    
Sbjct: 508 FSADGSRVLFTTRGEKGLELHSVDHMGLDKRVIAQGEKVTSY--AVSPDGNWLAFT---- 561

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT------------WSPSGRSLIFSRKKDGDTGS 416
           E F + VM    + + ++ + +    P             WS   ++L +S       G 
Sbjct: 562 EHFRVYVMPLTITGKPMVAQRAGGAVPVRGVSERAGEFLHWSADSQALHWS------NGP 615

Query: 417 KLYSIDLNGRNETLINTPAYASD 439
            L++ +L     +L      A D
Sbjct: 616 ALFTRNLTDAFTSLAPVDQQADD 638



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 95/278 (34%), Gaps = 46/278 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G ++  LT   +   F+P FSP+ +++A+ +  D +   +++MD       +
Sbjct: 67  DLYSVPLSGGSVTALTEGIE-WNFQPTFSPDGKRIAFVSDRDGN-DNIWVMDIDGTNVTQ 124

Query: 252 RIGNFRSMILAPRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATERL------TNT 300
                +  +  P +S + +        +S +   + +I+   +   +   +      T  
Sbjct: 125 VTSERKHNLHNPAWSPDSQWIAVRKGTVSGRSIPSGEIWMYHVNGGSGIEVVNNTDGTRA 184

Query: 301 LFINISASYSPDSSQIVFESDREGKE-------------QLYVMQSNGSDQKRISQDKEA 347
                  ++SPD   + +  D                   +  +     +   I+     
Sbjct: 185 QKSIAEPAFSPDGDYLYYSQDTTSGWVWQYNKDSTGEIFAIRRLDLTTGEIDTIT-GGPG 243

Query: 348 SYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVED------------SNLQA 394
               P  SP G  +AF K   +   AI +       E ++ +              N  A
Sbjct: 244 GAVRPTPSPDGSKLAFVKRLPDFNSAIVIRDLTSGMETIVYDSLERDEQETAGSHGNTTA 303

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             W P+GR L+F       T  +++ +D    +  ++ 
Sbjct: 304 FEWLPNGRDLVFW------TAGRIHRLDTETGDTKILP 335



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 87/241 (36%), Gaps = 24/241 (9%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNG 269
            ++L   + +P      + +      L    +     + P R+   R      P  S++G
Sbjct: 361 SKMLRWAQLTPAGNSAIFGSMGH---LYHSTIREDGAQKPARLTEQRDHFEYWPALSADG 417

Query: 270 KRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--- 325
           ++ + +   D+ +  +  V  +   +  L  T    +   +SPD   +V+     G    
Sbjct: 418 QQVVYTSWNDQNLGRVKVVSAKGGPSRTLVKTPGHYVQPKFSPDGEMVVYRKTTGGYLLS 477

Query: 326 ------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                   +Y++++ G    +IS         P +S  G  + FT    +   +  +   
Sbjct: 478 PLWSVEPGIYLVKTEGGTPIKISSAG----HHPTFSADGSRVLFTTRGEKGLELHSVDHM 533

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           G  +R++ +   + +   SP G  L F+         ++Y + L    + ++   A  + 
Sbjct: 534 GLDKRVIAQGEKVTSYAVSPDGNWLAFTEH------FRVYVMPLTITGKPMVAQRAGGAV 587

Query: 440 P 440
           P
Sbjct: 588 P 588



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 91/274 (33%), Gaps = 42/274 (15%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF- 265
           T           + PN + + +  +    I R+          P ++   + +    RF 
Sbjct: 294 TAGSHGNTTAFEWLPNGRDLVF--WTAGRIHRLDTETGDTKILPIQLSVTKKVRDTVRFP 351

Query: 266 ---SSN---------------GKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINIS 306
              + +               G  A+              D       RLT         
Sbjct: 352 VEVAPDSVDSKMLRWAQLTPAGNSAIFGSMGHLYHSTIREDGA-QKPARLTEQRDHFEYW 410

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + S D  Q+V+ S  +       + S      R        Y  P +SP G+++ + K 
Sbjct: 411 PALSADGQQVVYTSWNDQNLGRVKVVSAKGGPSRTLVKTPGHYVQPKFSPDGEMVVYRKT 470

Query: 367 SGE---------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           +G          +  I ++K +G     +    +   PT+S  G  ++F+ +  G+ G +
Sbjct: 471 TGGYLLSPLWSVEPGIYLVKTEGGTPIKISSAGH--HPTFSADGSRVLFTTR--GEKGLE 526

Query: 418 LYSIDLNGRNETLINTP------AYASDPQWVGF 445
           L+S+D  G ++ +I         A + D  W+ F
Sbjct: 527 LHSVDHMGLDKRVIAQGEKVTSYAVSPDGNWLAF 560



 Score = 76.6 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 15/105 (14%)

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFS 407
           +     SP G  + F         +  +   G     L E       PT+SP G+ + F 
Sbjct: 48  WSFVDVSPDGTRVIFDMLGD----LYSVPLSGGSVTALTEGIEWNFQPTFSPDGKRIAFV 103

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINT--------PAYASDPQWVG 444
             +DG     ++ +D++G N T + +        PA++ D QW+ 
Sbjct: 104 SDRDG--NDNIWVMDIDGTNVTQVTSERKHNLHNPAWSPDSQWIA 146


>gi|319424426|gb|ADV52500.1| amidohydrolase [Shewanella putrefaciens 200]
          Length = 1062

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 74/199 (37%), Gaps = 25/199 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK  +  +  D    IY + +     + L   +   +   YSPD   I F SD +
Sbjct: 58  SVSPDGKHIVFDLLGD----IYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGD 113

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKK 378
           G + +++M ++G   + ++++       P WSP    +          S     + +   
Sbjct: 114 GGDNIWIMDADGKKPRTVTKETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHV 173

Query: 379 DGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLYSI----D 422
            G +   L E  N +     P +SP GR + FS+            D+ + +Y I     
Sbjct: 174 TGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRYDT 233

Query: 423 LNGRNETLINTPAYASDPQ 441
             G  E LI     A  P 
Sbjct: 234 QTGEIEILIEGTGGAIRPT 252



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 94/251 (37%), Gaps = 31/251 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +      +        SP+ + + +      DI ++ +         K +    +  + 
Sbjct: 43  EQVKVDVNEGTWMNLSVSPDGKHIVFDLL--GDIYQIPV----TGGEAKPLAQGIAWQMQ 96

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV---- 317
           P +S +GK    +   D   +I+ +D        +T   F +  S ++SPDS  +V    
Sbjct: 97  PVYSPDGKHIAFTSDGDGGDNIWIMDADGKKPRTVTKETFRLLNSPAWSPDSQYLVARKH 156

Query: 318 FESDRE-GKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS------- 367
           F + R  G  ++++    G +  +++   + E    +P +SP G  I F++         
Sbjct: 157 FTASRSLGAGEVWLYHVTGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFH 216

Query: 368 ------GEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                    + I        +  +L+E       PT SP G  L + ++   D  S LY 
Sbjct: 217 YSKDSVNGIYKIKRYDTQTGEIEILIEGTGGAIRPTPSPDGTKLAYIKRD--DFQSSLYL 274

Query: 421 IDL-NGRNETL 430
           +DL +G    L
Sbjct: 275 LDLKSGETTKL 285



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 78/202 (38%), Gaps = 21/202 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQK 278
           SP+  KVA+     E + +++L      +  +     +++  L P++S +GK  + +   
Sbjct: 372 SPDGSKVAF-----EALGKIWLKSLPDGKMSRLTELDKNIAELYPQWSRDGKNIVFTTWS 426

Query: 279 D-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQL 328
           D +   +  +  +    ++LT+     +  ++SP+   +V+   + G            L
Sbjct: 427 DQDQGTVQVISAKGGKPKQLTSEPGKYVEPTFSPNGELVVYRKTQGGNLTPRTWSQEPGL 486

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLV 387
           Y +   G    +IS D   + F        D + F      E   +  +  DG  +R+  
Sbjct: 487 YKVDIKGKQNSKISADGYQAQFG----ANADRVFFMNSSEDETPQLSSINLDGFDKRVHY 542

Query: 388 EDSNLQAPTWSPSGRSLIFSRK 409
              +      SP G  L F+ +
Sbjct: 543 SSKHATEFRVSPDGEQLAFAER 564



 Score = 93.5 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 92/270 (34%), Gaps = 36/270 (13%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +      +   +   +  +   G   + L         +P +SP+ + +A+ 
Sbjct: 51  EGTWMNLSVSPDGKHIVFDLLGDIYQIPVTGGEAKPLAQG-IAWQMQPVYSPDGKHIAFT 109

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           + D +    +++MD    +          ++ +P +S + +  +     +  +   A ++
Sbjct: 110 S-DGDGGDNIWIMDADGKKPRTVTKETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEV 168

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESD-------------REGKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 169 WLYHVTGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKI 228

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   + + I  +       P  SP G  +A+ K    + ++ ++     +   L  
Sbjct: 229 KRYDTQTGEIE-ILIEGTGGAIRPTPSPDGTKLAYIKRDDFQSSLYLLDLKSGETTKLFG 287

Query: 389 --DSNLQA--------PT--WSPSGRSLIF 406
             D ++Q         PT  W+   + + F
Sbjct: 288 ELDRDMQETWAIHGVYPTMAWTQDNKDIFF 317



 Score = 91.6 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 75/466 (16%), Positives = 148/466 (31%), Gaps = 103/466 (22%)

Query: 37  KVATNSANYSPVSIAFT--------------KFVSIDELGGKVSEVVSKDLQRSDV---- 78
           ++        P++                   F S  + G  +  ++  D          
Sbjct: 76  QIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGDGGDNIW-IMDAD----GKKPRT 130

Query: 79  -----FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
                F L++  ++        +   F    SLGA     G V             L+ V
Sbjct: 131 VTKETFRLLNSPAWSPDSQYLVARKHFTASRSLGA-----GEVW------------LYHV 173

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
              +   G K    P   + +         + I   + D   +    S+  V+GI K   
Sbjct: 174 TGGE---GVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKR 230

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
                       +          P  SP+  K+AY   DD     +YL+D +     K  
Sbjct: 231 YDTQ---TGEIEILIEGTGGAIRPTPSPDGTKLAYIKRDDFQS-SLYLLDLKSGETTKLF 286

Query: 254 GNFR----------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           G              +     ++ + K      +      I  +++ +     +  ++  
Sbjct: 287 GELDRDMQETWAIHGVYPTMAWTQDNKDIFFWAKG----KINRLNVANKTLTDIPFSVKT 342

Query: 304 N--ISASY---------------------SPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              +  S                      SPD S++ FE+      ++++         R
Sbjct: 343 ELAVQPSVRFKQDIDKDVFDVKMLRMAQVSPDGSKVAFEA----LGKIWLKSLPDGKMSR 398

Query: 341 ISQ-DKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV-EDSNLQAPTW 397
           +++ DK  +   P WS  G  I FT +S  ++  + V+   G + + L  E      PT+
Sbjct: 399 LTELDKNIAELYPQWSRDGKNIVFTTWSDQDQGTVQVISAKGGKPKQLTSEPGKYVEPTF 458

Query: 398 SPSGRSLIFSRKKDGDTGSK-------LYSIDLNGRNETLINTPAY 436
           SP+G  +++ + + G+   +       LY +D+ G+  + I+   Y
Sbjct: 459 SPNGELVVYRKTQGGNLTPRTWSQEPGLYKVDIKGKQNSKISADGY 504



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 104/322 (32%), Gaps = 49/322 (15%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQK 225
               D    +     +    +    + +    G     LT  P+ ++ L EP +SP+ + 
Sbjct: 143 AWSPDSQYLVARKHFTASRSLGAGEVWLYHVTGGEGVKLTERPNDEKDLGEPAYSPDGRY 202

Query: 226 VAYATYDDEDILRVYLMDT-----------RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           + ++  D       Y  D+                 + +       + P  S +G +   
Sbjct: 203 IYFSQDDTPGKTFHYSKDSVNGIYKIKRYDTQTGEIEILIEGTGGAIRPTPSPDGTKLAY 262

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY----- 329
             + D    +Y +DL+S  T +L   L  ++  +++           ++ K+  +     
Sbjct: 263 IKRDDFQSSLYLLDLKSGETTKLFGELDRDMQETWAIHGVYPTMAWTQDNKDIFFWAKGK 322

Query: 330 ------------------VMQSNGSDQKRISQDKEASYFD------PVWSPQGDLIAFTK 365
                               +       R  QD +   FD         SP G  +AF  
Sbjct: 323 INRLNVANKTLTDIPFSVKTELAVQPSVRFKQDIDKDVFDVKMLRMAQVSPDGSKVAFEA 382

Query: 366 FSGEKFAIGVMK-KDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  I +    DG   RL   D N+    P WS  G++++F+   D D G+      
Sbjct: 383 LG----KIWLKSLPDGKMSRLTELDKNIAELYPQWSRDGKNIVFTTWSDQDQGTVQVISA 438

Query: 423 LNGRNETLINTPAYASDPQWVG 444
             G+ + L + P    +P +  
Sbjct: 439 KGGKPKQLTSEPGKYVEPTFSP 460



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 30/103 (29%), Gaps = 40/103 (38%)

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIF----------------------------------- 406
           Q ++ V +      + SP G+ ++F                                   
Sbjct: 44  QVKVDVNEGTWMNLSVSPDGKHIVFDLLGDIYQIPVTGGEAKPLAQGIAWQMQPVYSPDG 103

Query: 407 ---SRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
              +   DGD G  ++ +D +G+    +    +   + P W  
Sbjct: 104 KHIAFTSDGDGGDNIWIMDADGKKPRTVTKETFRLLNSPAWSP 146


>gi|114045524|ref|YP_736074.1| amidohydrolase [Shewanella sp. MR-7]
 gi|113886966|gb|ABI41017.1| amidohydrolase [Shewanella sp. MR-7]
          Length = 1062

 Score =  137 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 75/199 (37%), Gaps = 25/199 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK  +     D   +IY + +     + L   +   +   YSPD   I F SD +
Sbjct: 58  SVSPDGKHLVF----DLLGNIYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDAD 113

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKK 378
           G + +++M +NGS+ + ++ +       P WSP    +          S     + +   
Sbjct: 114 GGDNIWIMDANGSNPRTVTTETFRLLNSPAWSPDSQYLVGRKHFTASRSLGAGEVWLYHV 173

Query: 379 DGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLYSI----D 422
            G +   L E  N +     P +SP GR + FS+            D+ + +Y I     
Sbjct: 174 AGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRYDT 233

Query: 423 LNGRNETLINTPAYASDPQ 441
             G  E LI     A  P 
Sbjct: 234 QTGDIEILIEGTGGAIRPT 252



 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 90/236 (38%), Gaps = 31/236 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + + +      D+L             K +    +  + P +S +GK    +  
Sbjct: 58  SVSPDGKHLVF------DLLGNIYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSD 111

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVM 331
            D   +I+ +D   +    +T   F +  S ++SPDS  +V    F + R  G  ++++ 
Sbjct: 112 ADGGDNIWIMDANGSNPRTVTTETFRLLNSPAWSPDSQYLVGRKHFTASRSLGAGEVWLY 171

Query: 332 QSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVM 376
              G +  +++   + E    +P +SP G  I F++                  + I   
Sbjct: 172 HVAGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRY 231

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
                   +L+E       PT SP G  L + ++   D  S LY +DL +G    L
Sbjct: 232 DTQTGDIEILIEGTGGAIRPTPSPDGTKLAYIKRD--DFQSSLYLLDLKSGETTKL 285



 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 91/270 (33%), Gaps = 36/270 (13%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +      +   +  ++  +   G   + L         +P +SP+ + +A+ 
Sbjct: 51  EGTWMNISVSPDGKHLVFDLLGNIYQIPVTGGEAKPLAQG-IAWQMQPVYSPDGKHIAFT 109

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN-----GKRALISVQKDEAMDI 284
           + D +    +++MD               ++ +P +S +     G++   + +   A ++
Sbjct: 110 S-DADGGDNIWIMDANGSNPRTVTTETFRLLNSPAWSPDSQYLVGRKHFTASRSLGAGEV 168

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESD-------------REGKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 169 WLYHVAGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKI 228

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   D + I  +       P  SP G  +A+ K    + ++ ++     +   L  
Sbjct: 229 KRYDTQTGDIE-ILIEGTGGAIRPTPSPDGTKLAYIKRDDFQSSLYLLDLKSGETTKLYG 287

Query: 389 DSNLQA----------PT--WSPSGRSLIF 406
           D +             PT  W+   + + F
Sbjct: 288 DLDRDMQETWAIHGVYPTMAWTQDNKDIFF 317



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/343 (15%), Positives = 103/343 (30%), Gaps = 91/343 (26%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATYDDEDILRVYLMDTRIDR 248
           + +MD +G+N R +T    ++L  P +SP+ Q +     +          V+L       
Sbjct: 118 IWIMDANGSNPRTVTTETFRLLNSPAWSPDSQYLVGRKHFTASRSLGAGEVWLYHVAGGE 177

Query: 249 APKRIG--NFRSMILAPRFSSNGKRALISV-------------QKDEAMDIYSVDLQSNA 293
             K     N    +  P +S +G+    S                +    I   D Q+  
Sbjct: 178 GVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRYDTQTGD 237

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----------SQ 343
            E L       I  + SPD +++ +    + +  LY++     +  ++          + 
Sbjct: 238 IEILIEGTGGAIRPTPSPDGTKLAYIKRDDFQSSLYLLDLKSGETTKLYGDLDRDMQETW 297

Query: 344 DKEASYFDPVWSPQGDLIAFTK------------------------------------FS 367
                Y    W+     I F                                        
Sbjct: 298 AIHGVYPTMAWTQDNKDIFFWAKGKINRLNVANKTVTNIPFRVKTQLDVQPSVRFKQDID 357

Query: 368 GEKFAIGV-----MKKDGSQE-------------------RLLVEDSNLQA--PTWSPSG 401
            + F + +     +  DGS+                    RL    ++++   P WS  G
Sbjct: 358 KDVFDVKMLRMAQVSPDGSKVAFEALGKIWLKTLPDGKMSRLTELGNDIEELYPQWSRDG 417

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           ++++F+   D D G+        G+ + L   P    +P +  
Sbjct: 418 KNIVFTTWNDQDQGTVQVISAKGGKAKQLTTEPGKYVEPTFSP 460



 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 76/203 (37%), Gaps = 23/203 (11%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQ 277
           SP+  KVA+      + L    + T  D    R+    + I  L P++S +GK  + +  
Sbjct: 372 SPDGSKVAF------EALGKIWLKTLPDGKMSRLTELGNDIEELYPQWSRDGKNIVFTTW 425

Query: 278 KD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQ 327
            D +   +  +  +    ++LT      +  ++SPDS  +V+   + G            
Sbjct: 426 NDQDQGTVQVISAKGGKAKQLTTEPGKYVEPTFSPDSELVVYRKTQGGHLTPRTWSQEPG 485

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLL 386
           LY +       K+I+ +   + F        D I F      +   +  +  DG  +R+ 
Sbjct: 486 LYKVDLKTKQNKKITAEGYQAQFGAS----ADRIFFMNTGENDTPQLASINLDGFDKRVH 541

Query: 387 VEDSNLQAPTWSPSGRSLIFSRK 409
               +      SP G  L F+ +
Sbjct: 542 YSSKHATEFRVSPDGEQLAFAER 564



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 69/401 (17%), Positives = 131/401 (32%), Gaps = 75/401 (18%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F L++  ++            F    SLGA     G V             L+ V   + 
Sbjct: 136 FRLLNSPAWSPDSQYLVGRKHFTASRSLGA-----GEVW------------LYHVAGGE- 177

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
             G K    P   + +         + I   + D   +    S+  V+GI K  +   D 
Sbjct: 178 --GVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYK--IKRYDT 233

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR- 257
              +I  L       +  P  SP+  K+AY   DD     +YL+D +     K  G+   
Sbjct: 234 QTGDIEILIEGTGGAI-RPTPSPDGTKLAYIKRDDFQS-SLYLLDLKSGETTKLYGDLDR 291

Query: 258 ---------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINIS 306
                     +     ++ + K      +      I  +++ +     +       +++ 
Sbjct: 292 DMQETWAIHGVYPTMAWTQDNKDIFFWAKG----KINRLNVANKTVTNIPFRVKTQLDVQ 347

Query: 307 ASY---------------------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            S                      SPD S++ FE+      ++++         R+++  
Sbjct: 348 PSVRFKQDIDKDVFDVKMLRMAQVSPDGSKVAFEA----LGKIWLKTLPDGKMSRLTELG 403

Query: 346 EA-SYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGR 402
                  P WS  G  I FT ++  ++  + V+   G + + L  E      PT+SP   
Sbjct: 404 NDIEELYPQWSRDGKNIVFTTWNDQDQGTVQVISAKGGKAKQLTTEPGKYVEPTFSPDSE 463

Query: 403 SLIFSRKKDGDTGSK-------LYSIDLNGRNETLINTPAY 436
            +++ + + G    +       LY +DL  +    I    Y
Sbjct: 464 LVVYRKTQGGHLTPRTWSQEPGLYKVDLKTKQNKKITAEGY 504



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 9/103 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRS 403
            E ++ +   SP G  + F         I  +   G + + L +    Q  P +SP G+ 
Sbjct: 50  TEGTWMNISVSPDGKHLVFDLLG----NIYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKH 105

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
           + F+   DG  G  ++ +D NG N   + T  +   + P W  
Sbjct: 106 IAFTSDADG--GDNIWIMDANGSNPRTVTTETFRLLNSPAWSP 146


>gi|292492884|ref|YP_003528323.1| hypothetical protein Nhal_2871 [Nitrosococcus halophilus Nc4]
 gi|291581479|gb|ADE15936.1| WD40 domain protein beta Propeller [Nitrosococcus halophilus Nc4]
          Length = 358

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 110/287 (38%), Gaps = 46/287 (16%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD------- 232
           + +S    +  +++  MD DG N+R ++  +         +P+ Q + YA+         
Sbjct: 71  IFQSTRDNLKCDAIFRMDADGKNVRMVSSGKGVTTCSF-IAPDNQSIIYASTHLAGEQCP 129

Query: 233 -DEDILRVYLMDTRIDRAP----------KRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
              D  + Y+                    R+ +         +S  G + + +  +   
Sbjct: 130 PKPDYSQGYVWPLYKGYDIFRADPEGDNLVRLTDTPGYDAEAVYSPLGDKIIFTSVRTGD 189

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------------------R 322
           +++++++   +  E+LT+    +  A +S D   IV+ +                    R
Sbjct: 190 LELFTMNPDGSGVEQLTDEPGYDGGAFFSRDGQWIVWRASRPQGKALEDYQHLLKQGLIR 249

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKK 378
            G+ ++++M        +++ +  A+ F P W P G  I F+       G  F + ++  
Sbjct: 250 PGQLEIFIMNLEERKPIQLTDNGAAN-FGPYWHPDGKHIIFSSNMHNPKGRNFDLFLINV 308

Query: 379 DGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG--DTGSKLYSID 422
           +  + E++         P +S  G+ L+F+  ++G     + ++ +D
Sbjct: 309 ETREIEQVTYYPDFDGFPMFSHDGKKLVFASNRNGKVKGETNVFMVD 355



 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 92/268 (34%), Gaps = 44/268 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  ++ + +  D              +  + + + + +      + + +  + +   
Sbjct: 63  FSFDGSELIFQSTRDNLKCDAIFRMDADGKNVRMVSSGKGVTTCSFIAPDNQSIIYASTH 122

Query: 279 --------------------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                                +  DI+  D + +   RLT+T   +  A YSP   +I+F
Sbjct: 123 LAGEQCPPKPDYSQGYVWPLYKGYDIFRADPEGDNLVRLTDTPGYDAEAVYSPLGDKIIF 182

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------------- 365
            S R G  +L+ M  +GS  ++++ D+        +S  G  I +               
Sbjct: 183 TSVRTGDLELFTMNPDGSGVEQLT-DEPGYDGGAFFSRDGQWIVWRASRPQGKALEDYQH 241

Query: 366 ------FSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSK- 417
                     +  I +M  +  +   L ++      P W P G+ +IFS       G   
Sbjct: 242 LLKQGLIRPGQLEIFIMNLEERKPIQLTDNGAANFGPYWHPDGKHIIFSSNMHNPKGRNF 301

Query: 418 -LYSIDLNGRN-ETLINTPAYASDPQWV 443
            L+ I++  R  E +   P +   P + 
Sbjct: 302 DLFLINVETREIEQVTYYPDFDGFPMFS 329



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 38/206 (18%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTN-----TLFINISASYSPDSSQIVFESDREGK-- 325
            ++ +  +     + DL+    + LT+         N  A +S D S+++F+S R+    
Sbjct: 22  AMAAEPTDNPTPAAEDLRYPGEKHLTHIRQLTFGGQNAEAYFSFDGSELIFQSTRDNLKC 81

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------------------ 367
           + ++ M ++G + + +S  K         +P    I +                      
Sbjct: 82  DAIFRMDADGKNVRMVSSGK-GVTTCSFIAPDNQSIIYASTHLAGEQCPPKPDYSQGYVW 140

Query: 368 --GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              + + I     +G     L +         +SP G  +IF+  + GD   +L++++ +
Sbjct: 141 PLYKGYDIFRADPEGDNLVRLTDTPGYDAEAVYSPLGDKIIFTSVRTGD--LELFTMNPD 198

Query: 425 GRN-ETLINTPAY------ASDPQWV 443
           G   E L + P Y      + D QW+
Sbjct: 199 GSGVEQLTDEPGYDGGAFFSRDGQWI 224


>gi|126172273|ref|YP_001048422.1| WD40 domain-containing protein [Shewanella baltica OS155]
 gi|125995478|gb|ABN59553.1| WD40 domain protein beta Propeller [Shewanella baltica OS155]
          Length = 445

 Score =  136 bits (343), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 76/199 (38%), Gaps = 25/199 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK  +  +  D    IY + +     + L   +   +   YSPD   I F SD +
Sbjct: 58  SVSPDGKHIVFDLLGD----IYQIPVSGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGD 113

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKK 378
           G + +++M ++GS+ + ++Q+       P WSP    +          S     + +   
Sbjct: 114 GGDNIWIMDADGSNPRTVTQETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHV 173

Query: 379 DGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLYSI----D 422
            G +   L E  N Q     P +SP GR + FS+            D+ + +Y I     
Sbjct: 174 AGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRYDT 233

Query: 423 LNGRNETLINTPAYASDPQ 441
             G  E LI     A  P 
Sbjct: 234 QTGDIEILIEGTGGAIRPT 252



 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 91/236 (38%), Gaps = 31/236 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + + +      DI ++ +         K +    +  + P +S +GK    +  
Sbjct: 58  SVSPDGKHIVF--DLLGDIYQIPV----SGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSD 111

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVM 331
            D   +I+ +D   +    +T   F +  S ++SPDS  +V    F + R  G  ++++ 
Sbjct: 112 GDGGDNIWIMDADGSNPRTVTQETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLY 171

Query: 332 QSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVM 376
              G +  ++++         +P +SP G  I F++                  + I   
Sbjct: 172 HVAGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRY 231

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
                   +L+E       PT SP G  L + ++   D  S LY +DL +G    L
Sbjct: 232 DTQTGDIEILIEGTGGAIRPTPSPDGTKLAYIKRD--DFNSSLYLLDLKSGETTKL 285



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 90/270 (33%), Gaps = 36/270 (13%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +      +   +   +  +   G   + L         +P +SP+ + +A+ 
Sbjct: 51  EGTWMNLSVSPDGKHIVFDLLGDIYQIPVSGGEAKPLAQG-IAWQMQPVYSPDGKHIAFT 109

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           + D +    +++MD               ++ +P +S + +  +     +  +   A ++
Sbjct: 110 S-DGDGGDNIWIMDADGSNPRTVTQETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEV 168

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESD-------------REGKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 169 WLYHVAGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKI 228

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   D + I  +       P  SP G  +A+ K      ++ ++     +   L  
Sbjct: 229 KRYDTQTGDIE-ILIEGTGGAIRPTPSPDGTKLAYIKRDDFNSSLYLLDLKSGETTKLFG 287

Query: 389 --DSNLQA--------PT--WSPSGRSLIF 406
             D ++Q         PT  W+   + + F
Sbjct: 288 ELDRDMQETWAIHGVYPTMAWTQDNKDIFF 317



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 49/299 (16%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQK 225
               D    +     +    +    + +    G     LT  P+  + L EP +SP+ + 
Sbjct: 143 AWSPDSQYLVARKHFTASRSLGAGEVWLYHVAGGEGVKLTERPNDQKDLGEPAYSPDGRY 202

Query: 226 VAYATYDDEDILRVYLMDT-----------RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           + ++  D       Y  D+                 + +       + P  S +G +   
Sbjct: 203 IYFSQDDTPGKTFHYSKDSVNGIYKIKRYDTQTGDIEILIEGTGGAIRPTPSPDGTKLAY 262

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY----- 329
             + D    +Y +DL+S  T +L   L  ++  +++           ++ K+  +     
Sbjct: 263 IKRDDFNSSLYLLDLKSGETTKLFGELDRDMQETWAIHGVYPTMAWTQDNKDIFFWAKGK 322

Query: 330 ------------------VMQSNGSDQKRISQDKEASYFD------PVWSPQGDLIAFTK 365
                               +       R  QD +   FD         SP G  +AF  
Sbjct: 323 INRLNVASKTLTDIPFSVKTELAVQPSVRFKQDIDKDVFDVKMLRMAQVSPDGSKVAFEA 382

Query: 366 FSGEKFAIGVMK-KDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                  I +    DG   RL   ++ ++   P WS  G++++F+   D + G+    +
Sbjct: 383 LG----KIWLKSLPDGKMSRLTELNNGVEELYPQWSRDGKNIVFTTWNDQEQGTVQVLV 437



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 99/306 (32%), Gaps = 50/306 (16%)

Query: 99  RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI 158
               W S  +Q LV  +     +     E  L+ V   +   G K    P   + +    
Sbjct: 140 NSPAW-SPDSQYLVARKHFTASRSLGAGEVWLYHVAGGE---GVKLTERPNDQKDLGEPA 195

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
                + I   + D   +    S+  V+GI K  +   D    +I  L       +  P 
Sbjct: 196 YSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYK--IKRYDTQTGDIEILIEGTGGAI-RPT 252

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR----------SMILAPRFSSN 268
            SP+  K+AY   DD +   +YL+D +     K  G              +     ++ +
Sbjct: 253 PSPDGTKLAYIKRDDFNS-SLYLLDLKSGETTKLFGELDRDMQETWAIHGVYPTMAWTQD 311

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASY----------------- 309
            K      +      I  +++ S     +  ++     +  S                  
Sbjct: 312 NKDIFFWAKG----KINRLNVASKTLTDIPFSVKTELAVQPSVRFKQDIDKDVFDVKMLR 367

Query: 310 ----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFT 364
               SPD S++ FE+      ++++         R+++         P WS  G  I FT
Sbjct: 368 MAQVSPDGSKVAFEA----LGKIWLKSLPDGKMSRLTELNNGVEELYPQWSRDGKNIVFT 423

Query: 365 KFSGEK 370
            ++ ++
Sbjct: 424 TWNDQE 429



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 40/103 (38%)

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIF----------------------------------- 406
           Q ++ V +      + SP G+ ++F                                   
Sbjct: 44  QVKIDVNEGTWMNLSVSPDGKHIVFDLLGDIYQIPVSGGEAKPLAQGIAWQMQPVYSPDG 103

Query: 407 ---SRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
              +   DGD G  ++ +D +G N   +    +   + P W  
Sbjct: 104 KHIAFTSDGDGGDNIWIMDADGSNPRTVTQETFRLLNSPAWSP 146


>gi|326522999|dbj|BAJ88545.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 706

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 76/405 (18%), Positives = 145/405 (35%), Gaps = 82/405 (20%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
            P     F    S GA  LV     + G +   +E  + D+     I    +F       
Sbjct: 288 TPPGFHAFTPAASPGAPGLVAVATRRPGSEYRHIE--VIDLSAGGGIENAAYFEMTRPVA 345

Query: 153 KIAHTISDDI--------YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
             AH  +  +        Y    G  G+ +S +L  S    +      +     DG+   
Sbjct: 346 PRAHHFNPFVSPDGARVGYHRCRG-TGNGDSPLLLESLKSPASESLFRI-----DGS--- 396

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS------ 258
                       P FSP+ +++A+       +  +Y++++      ++I +  +      
Sbjct: 397 -----------YPSFSPDGRRIAFV-----GLPGLYVVNSDGSGGRRKIFSGNAFPTSWD 440

Query: 259 --------MILAPRF---SSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINI 305
                     + P F   S+      +S+    D+   IY V +     ++LT     N 
Sbjct: 441 WKRKGVIYTSIGPDFASESTEVDVVAVSLGDDNDDDGSIYQVSI-----KKLTVGGENNA 495

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAF 363
             S SPD   +VF S R G + LY+M +   +   I +  +  + D    WSP G+ IAF
Sbjct: 496 FPSPSPDGKWLVFRSGRSGHKNLYIMDAEEGEAGGIRRLTDGPWTDTMCNWSPDGEWIAF 555

Query: 364 TKFS----GEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRK------- 409
                   G  FAI ++  + +  R +V   +      P +SP  + ++F+         
Sbjct: 556 ASDRHNPGGGSFAIYMVHPNSTGLRRVVHSADGGRTNHPWFSPDSKRMVFTSDLAAVSAE 615

Query: 410 -----KDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG-FMD 447
                       ++++I+++G     +   ++    P W   F++
Sbjct: 616 PISNPHHYQPYGEIFTINIDGSGLQRLTHNSFEDGTPSWTPHFLE 660



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 82/278 (29%), Gaps = 56/278 (20%)

Query: 216 EPRFSPNQQKVAYATYD-----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            P  + +  ++ Y +                          R+        +P  S +G 
Sbjct: 142 RPALTRDGSRLVYVSTAVPAAAPRRSWAAVYATHLPSGRATRLTPPGVADFSPAVSPSGD 201

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-------SASYSPDSSQIVFESDRE 323
            A  +   +        DL+++     T                 ++ D++      D +
Sbjct: 202 WAAAASPGEHGWAGEVQDLRTDVYVFRTTDGSRRTLLVKNGGWPCWADDATLFFHRRDSD 261

Query: 324 GKEQLYVMQSNGSD--------QKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKF-A 372
           G   +Y  +   SD         +RI+     + F P  SP   G +   T+  G ++  
Sbjct: 262 GWYGVYRAKIEVSDDGLLSAASVERITPPGFHA-FTPAASPGAPGLVAVATRRPGSEYRH 320

Query: 373 IGVMKKDGSQ----------ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS------ 416
           I V+                 R +   ++   P  SP G  + + R +    G       
Sbjct: 321 IEVIDLSAGGGIENAAYFEMTRPVAPRAHHFNPFVSPDGARVGYHRCRGTGNGDSPLLLE 380

Query: 417 --------KLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                    L+ ID         + P+++ D + + F+
Sbjct: 381 SLKSPASESLFRIDG--------SYPSFSPDGRRIAFV 410



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 68/207 (32%), Gaps = 43/207 (20%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV----------------DLQSNATE 295
           R+ +  S+     F+ +    L   +++ +++IY                  D  S+   
Sbjct: 67  RLTDGASVNYNGNFAPSSDALLFVSERNGSLNIYLSPAPPSSSSRREALQLEDGDSSPAA 126

Query: 296 RLTNTLFIN-----ISASYSPDSSQIVFESD-------REGKEQLYVMQSNGSDQKRISQ 343
                L  +        + + D S++V+ S        R     +Y          R++ 
Sbjct: 127 PPMPLLPWDPVALRDRPALTRDGSRLVYVSTAVPAAAPRRSWAAVYATHLPSGRATRLTP 186

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK----------DGSQERLLVEDSNLQ 393
              A  F P  SP GD  A        +A  V             DGS+  LLV++    
Sbjct: 187 PGVA-DFSPAVSPSGDWAAAASPGEHGWAGEVQDLRTDVYVFRTTDGSRRTLLVKNGGW- 244

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYS 420
            P W+      +F  ++D D    +Y 
Sbjct: 245 -PCWADDAT--LFFHRRDSDGWYGVYR 268



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 59/209 (28%), Gaps = 38/209 (18%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R    V         S+     A  RLT+   +N + +++P S  ++F S+R G   +Y
Sbjct: 41  SRYAFDVYALPLAPSLSIPASPAAELRLTDGASVNYNGNFAPSSDALLFVSERNGSLNIY 100

Query: 330 VMQSNGSDQKR--------------------ISQDKEASYFDPVWSPQGDLIAFTK---- 365
           +  +  S   R                    +  D  A    P  +  G  + +      
Sbjct: 101 LSPAPPSSSSRREALQLEDGDSSPAAPPMPLLPWDPVALRDRPALTRDGSRLVYVSTAVP 160

Query: 366 ----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                             G   RL        +P  SPSG     +   +     ++  +
Sbjct: 161 AAAPRRSWAAVYATHLPSGRATRLTPPGVADFSPAVSPSGDWAAAASPGEHGWAGEVQDL 220

Query: 422 --------DLNGRNETLINTPAYASDPQW 442
                     +G   TL+        P W
Sbjct: 221 RTDVYVFRTTDGSRRTLLVKNG--GWPCW 247


>gi|332665829|ref|YP_004448617.1| amidohydrolase [Haliscomenobacter hydrossis DSM 1100]
 gi|332334643|gb|AEE51744.1| amidohydrolase [Haliscomenobacter hydrossis DSM 1100]
          Length = 1162

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 79/205 (38%), Gaps = 21/205 (10%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               ++   S +G+     +  D    IYS+ L     ++LTN +  +    +SPD  +I
Sbjct: 91  EGTWMSLDVSPDGQTIAFDLMGD----IYSIPLAGGKAKQLTNGMAYDTHPKWSPDGKKI 146

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            F SDR G E  + +     D  +I++D +       W+P G+ +      G    + + 
Sbjct: 147 AFTSDRSGSENAWYIDFEKQDTVQITKDNDQHVQSVEWTPDGNYLI-VSKGGRNLKLFMF 205

Query: 377 KKDGSQERLLVEDS---NLQAPTWSPSGRSLIFSRKKDG------DTGSKLYSIDL-NGR 426
            KDG     L++         P +    R + FSR+             +L + D   G+
Sbjct: 206 HKDGGGGTQLIKTPETLKCIEPAFGKDSRYIWFSRRTGAWNYNAILPQYQLATFDRETGQ 265

Query: 427 NETLIN------TPAYASDPQWVGF 445
            ET          P  ++D  W+ +
Sbjct: 266 VETRTERIGSAFAPTLSADGNWLVY 290



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 86/207 (41%), Gaps = 18/207 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ Q +A+      DI  + L         K++ N  +    P++S +GK+   +  + 
Sbjct: 100 SPDGQTIAFDLM--GDIYSIPL----AGGKAKQLTNGMAYDTHPKWSPDGKKIAFTSDRS 153

Query: 280 EAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            + + + +D +   T ++T     ++ S  ++PD + ++  S      +L++   +G   
Sbjct: 154 GSENAWYIDFEKQDTVQITKDNDQHVQSVEWTPDGNYLI-VSKGGRNLKLFMFHKDGGGG 212

Query: 339 KRISQDKEAS-YFDPVWSPQGDLIAFTKFSGE--------KFAIGVMKKDGSQERLLVED 389
            ++ +  E     +P +      I F++ +G         ++ +    ++  Q     E 
Sbjct: 213 TQLIKTPETLKCIEPAFGKDSRYIWFSRRTGAWNYNAILPQYQLATFDRETGQVETRTER 272

Query: 390 -SNLQAPTWSPSGRSLIFSRKKDGDTG 415
             +  APT S  G  L++  + +  TG
Sbjct: 273 IGSAFAPTLSADGNWLVYGTRFNEQTG 299



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 99/284 (34%), Gaps = 34/284 (11%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +   +G + S  +      ++  +   +  +   G   + LT         P++SP+ +
Sbjct: 86  KLQVNEGTWMSLDVSPDGQTIAFDLMGDIYSIPLAGGKAKQLTNG-MAYDTHPKWSPDGK 144

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           K+A+ + D       + +D       +   +    + +  ++ +G   ++S +    + +
Sbjct: 145 KIAFTS-DRSGSENAWYIDFEKQDTVQITKDNDQHVQSVEWTPDGNYLIVS-KGGRNLKL 202

Query: 285 YSVDLQSNATERLTNTLFI--NISASYSPDSSQIVFESDREG---------KEQLYVMQS 333
           +          +L  T      I  ++  DS  I F S R G         + QL     
Sbjct: 203 FMFHKDGGGGTQLIKTPETLKCIEPAFGKDSRYIWF-SRRTGAWNYNAILPQYQLATFDR 261

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-----E 388
                +  + ++  S F P  S  G+ + +     E+  +        +E  L      +
Sbjct: 262 ETGQVETRT-ERIGSAFAPTLSADGNWLVYGTRFNEQTGLVKRNIQTGEEAWLAYPVQRD 320

Query: 389 DSNLQAP-------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +    AP       +++P  + +I         G K++ + ++G
Sbjct: 321 EQESIAPLGVYPALSFTPDSKFVI------ASYGGKIWKLPIDG 358



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 105/304 (34%), Gaps = 52/304 (17%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS--PN-------- 222
           FN +   V  ++ +G        + RD         S   +   P  S  P+        
Sbjct: 294 FNEQTGLVKRNIQTGEEAWLAYPVQRD------EQESIAPLGVYPALSFTPDSKFVIASY 347

Query: 223 QQKVAYATYDDEDILRV-YLMDTRIDRAPKRIGNFR---------SMILAPRFSSNGKRA 272
             K+     D    + V + +D  ++  P    +F          + I  P+ S +G + 
Sbjct: 348 GGKIWKLPIDGGAAVNVPFEVDVELEMGPAVKFDFPISNDKTMIANQIRDPKISPDGSKL 407

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +V       +Y +D  + +  RLTN         +SPD + I + +    +  +Y + 
Sbjct: 408 TFTV----LNRLYVMDYPNGSPRRLTNANHTEAMPIWSPDGASIAYVTWENKEGHIYKVN 463

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-------------AIGVMKKD 379
                  +++++  A+Y+D  W  + + I F     + F              +  +  D
Sbjct: 464 VATGANTKLTRNG-ATYYDLGWDAKTNRIVFNYSPAQVFEDAYSPFFSSPSENLAWISAD 522

Query: 380 GSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL-INTPAYA 437
           G     + + ++   P +     R  +FS  K       L SI  +G +E + +      
Sbjct: 523 GGDITRIEKSNSRSNPHFVKADERIYLFSGAKG------LVSIRWDGTDEKVHLKVSGIT 576

Query: 438 SDPQ 441
           + P 
Sbjct: 577 TFPA 580



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 55/346 (15%), Positives = 104/346 (30%), Gaps = 65/346 (18%)

Query: 141 GKKFFSSPASWRKIAHTIS-DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
           G +   +P + + I      D  Y   +   G +N   +           +  L   DR+
Sbjct: 212 GTQLIKTPETLKCIEPAFGKDSRYIWFSRRTGAWNYNAILP---------QYQLATFDRE 262

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV--YLMDTRIDRAPKRIGNFR 257
              +   T  R    F P  S +   + Y T  +E    V   +           +    
Sbjct: 263 TGQVETRTE-RIGSAFAPTLSADGNWLVYGTRFNEQTGLVKRNIQTGEEAWLAYPVQRDE 321

Query: 258 SMILAP-------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---- 306
              +AP        F+ + K  + S        I+ + +   A   +   + + +     
Sbjct: 322 QESIAPLGVYPALSFTPDSKFVIASY----GGKIWKLPIDGGAAVNVPFEVDVELEMGPA 377

Query: 307 --------------------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                                  SPD S++ F        +LYVM       +R++ +  
Sbjct: 378 VKFDFPISNDKTMIANQIRDPKISPDGSKLTFTV----LNRLYVMDYPNGSPRRLT-NAN 432

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +   P+WSP G  IA+  +  ++  I  +    G+  +L    +      W      ++
Sbjct: 433 HTEAMPIWSPDGASIAYVTWENKEGHIYKVNVATGANTKLTRNGATYYDLGWDAKTNRIV 492

Query: 406 FSRKKD-----------GDTGSKLYSIDLNGRNETLINTPAYASDP 440
           F+                     L  I  +G + T I      S+P
Sbjct: 493 FNYSPAQVFEDAYSPFFSSPSENLAWISADGGDITRIEKSNSRSNP 538



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 7/65 (10%)

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASD 439
            + +L V +    +   SP G+++ F      D    +YSI L G   + L N  AY + 
Sbjct: 83  RKVKLQVNEGTWMSLDVSPDGQTIAF------DLMGDIYSIPLAGGKAKQLTNGMAYDTH 136

Query: 440 PQWVG 444
           P+W  
Sbjct: 137 PKWSP 141


>gi|120596842|ref|YP_961416.1| amidohydrolase [Shewanella sp. W3-18-1]
 gi|120556935|gb|ABM22862.1| amidohydrolase [Shewanella sp. W3-18-1]
          Length = 1062

 Score =  136 bits (342), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 74/199 (37%), Gaps = 25/199 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK  +  +  D    IY + +     + L   +   +   YSPD   I F SD +
Sbjct: 58  SVSPDGKHIVFDLLGD----IYQIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGD 113

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKK 378
           G + +++M ++G   + ++++       P WSP    +          S     + +   
Sbjct: 114 GGDNIWIMDADGKKPRTVTKETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHV 173

Query: 379 DGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLYSI----D 422
            G +   L E  N +     P +SP GR + FS+            D+ + +Y I     
Sbjct: 174 AGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRYDT 233

Query: 423 LNGRNETLINTPAYASDPQ 441
             G  E LI     A  P 
Sbjct: 234 QTGEIEILIEGTGGAIRPT 252



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 94/251 (37%), Gaps = 31/251 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +      +        SP+ + + +      DI ++ +         K +    +  + 
Sbjct: 43  EQVKVDVNEGTWMNLSVSPDGKHIVFDLL--GDIYQIPV----TGGEAKPLAQGIAWQMQ 96

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV---- 317
           P +S +GK    +   D   +I+ +D        +T   F +  S ++SPDS  +V    
Sbjct: 97  PVYSPDGKHIAFTSDGDGGDNIWIMDADGKKPRTVTKETFRLLNSPAWSPDSQYLVARKH 156

Query: 318 FESDRE-GKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS------- 367
           F + R  G  ++++    G +  +++   + E    +P +SP G  I F++         
Sbjct: 157 FTASRSLGAGEVWLYHVAGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFH 216

Query: 368 ------GEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                    + I        +  +L+E       PT SP G  L + ++   D  S LY 
Sbjct: 217 YSKDSVNGIYKIKRYDTQTGEIEILIEGTGGAIRPTPSPDGTKLAYIKRD--DFQSSLYL 274

Query: 421 IDL-NGRNETL 430
           +DL +G    L
Sbjct: 275 LDLKSGETTKL 285



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 92/270 (34%), Gaps = 36/270 (13%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +      +   +   +  +   G   + L         +P +SP+ + +A+ 
Sbjct: 51  EGTWMNLSVSPDGKHIVFDLLGDIYQIPVTGGEAKPLAQG-IAWQMQPVYSPDGKHIAFT 109

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           + D +    +++MD    +          ++ +P +S + +  +     +  +   A ++
Sbjct: 110 S-DGDGGDNIWIMDADGKKPRTVTKETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEV 168

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESD-------------REGKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 169 WLYHVAGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKI 228

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   + + I  +       P  SP G  +A+ K    + ++ ++     +   L  
Sbjct: 229 KRYDTQTGEIE-ILIEGTGGAIRPTPSPDGTKLAYIKRDDFQSSLYLLDLKSGETTKLFG 287

Query: 389 --DSNLQA--------PT--WSPSGRSLIF 406
             D ++Q         PT  W+   + + F
Sbjct: 288 ELDRDMQETWAIHGVYPTMAWTQDSKDIFF 317



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 77/202 (38%), Gaps = 21/202 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQK 278
           SP+  KV +     E + +++L      +  +     +++  L P++S +GK  + +   
Sbjct: 372 SPDGSKVTF-----EALGKIWLKSLPDGKMSRLTELDKNIAELYPQWSRDGKNIVFTTWN 426

Query: 279 D-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQL 328
           D +   +  +  +    ++LT+     +  ++SP+   +V+   + G            L
Sbjct: 427 DQDQGTVQVISAKGGKPKQLTSEPGKYVEPTFSPNGELVVYRKTQGGNLTPRTWSQEPGL 486

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLV 387
           Y +   G    ++S D   + F        D I F      E   +  +  DG  +R+  
Sbjct: 487 YKVDIKGKQNSKLSADGYQAQFG----ANADRIFFMNSSEDETPQLSSINLDGFDKRVHY 542

Query: 388 EDSNLQAPTWSPSGRSLIFSRK 409
              +      SP G  L F+ +
Sbjct: 543 SSKHATEFRVSPDGEQLAFAER 564



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 73/466 (15%), Positives = 148/466 (31%), Gaps = 103/466 (22%)

Query: 37  KVATNSANYSPVSIAFT--------------KFVSIDELGGKVSEVVSKDLQRSDV---- 78
           ++        P++                   F S  + G  +  ++  D          
Sbjct: 76  QIPVTGGEAKPLAQGIAWQMQPVYSPDGKHIAFTSDGDGGDNIW-IMDAD----GKKPRT 130

Query: 79  -----FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
                F L++  ++        +   F    SLGA     G V             L+ V
Sbjct: 131 VTKETFRLLNSPAWSPDSQYLVARKHFTASRSLGA-----GEVW------------LYHV 173

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
              +   G K    P   + +         + I   + D   +    S+  V+GI K   
Sbjct: 174 AGGE---GVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKR 230

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
                       +          P  SP+  K+AY   DD     +YL+D +     K  
Sbjct: 231 YDTQ---TGEIEILIEGTGGAIRPTPSPDGTKLAYIKRDDFQS-SLYLLDLKSGETTKLF 286

Query: 254 GNFR----------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           G              +     ++ + K      +      I  +++ +     +  ++  
Sbjct: 287 GELDRDMQETWAIHGVYPTMAWTQDSKDIFFWAKG----KINRLNVANKTLTDIPFSVKT 342

Query: 304 N--ISASY---------------------SPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              +  S                      SPD S++ FE+      ++++         R
Sbjct: 343 ELAVQPSVRFKQDIDKDVFDVKMLRMAQVSPDGSKVTFEA----LGKIWLKSLPDGKMSR 398

Query: 341 ISQ-DKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV-EDSNLQAPTW 397
           +++ DK  +   P WS  G  I FT ++  ++  + V+   G + + L  E      PT+
Sbjct: 399 LTELDKNIAELYPQWSRDGKNIVFTTWNDQDQGTVQVISAKGGKPKQLTSEPGKYVEPTF 458

Query: 398 SPSGRSLIFSRKKDGDTGSK-------LYSIDLNGRNETLINTPAY 436
           SP+G  +++ + + G+   +       LY +D+ G+  + ++   Y
Sbjct: 459 SPNGELVVYRKTQGGNLTPRTWSQEPGLYKVDIKGKQNSKLSADGY 504



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 53/322 (16%), Positives = 103/322 (31%), Gaps = 49/322 (15%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQK 225
               D    +     +    +    + +    G     LT  P+ ++ L EP +SP+ + 
Sbjct: 143 AWSPDSQYLVARKHFTASRSLGAGEVWLYHVAGGEGVKLTERPNDEKDLGEPAYSPDGRY 202

Query: 226 VAYATYDDEDILRVYLMDT-----------RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           + ++  D       Y  D+                 + +       + P  S +G +   
Sbjct: 203 IYFSQDDTPGKTFHYSKDSVNGIYKIKRYDTQTGEIEILIEGTGGAIRPTPSPDGTKLAY 262

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY----- 329
             + D    +Y +DL+S  T +L   L  ++  +++           ++ K+  +     
Sbjct: 263 IKRDDFQSSLYLLDLKSGETTKLFGELDRDMQETWAIHGVYPTMAWTQDSKDIFFWAKGK 322

Query: 330 ------------------VMQSNGSDQKRISQDKEASYFD------PVWSPQGDLIAFTK 365
                               +       R  QD +   FD         SP G  + F  
Sbjct: 323 INRLNVANKTLTDIPFSVKTELAVQPSVRFKQDIDKDVFDVKMLRMAQVSPDGSKVTFEA 382

Query: 366 FSGEKFAIGVMK-KDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  I +    DG   RL   D N+    P WS  G++++F+   D D G+      
Sbjct: 383 LG----KIWLKSLPDGKMSRLTELDKNIAELYPQWSRDGKNIVFTTWNDQDQGTVQVISA 438

Query: 423 LNGRNETLINTPAYASDPQWVG 444
             G+ + L + P    +P +  
Sbjct: 439 KGGKPKQLTSEPGKYVEPTFSP 460



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 30/103 (29%), Gaps = 40/103 (38%)

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIF----------------------------------- 406
           Q ++ V +      + SP G+ ++F                                   
Sbjct: 44  QVKVDVNEGTWMNLSVSPDGKHIVFDLLGDIYQIPVTGGEAKPLAQGIAWQMQPVYSPDG 103

Query: 407 ---SRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
              +   DGD G  ++ +D +G+    +    +   + P W  
Sbjct: 104 KHIAFTSDGDGGDNIWIMDADGKKPRTVTKETFRLLNSPAWSP 146


>gi|295689246|ref|YP_003592939.1| amidohydrolase [Caulobacter segnis ATCC 21756]
 gi|295431149|gb|ADG10321.1| amidohydrolase [Caulobacter segnis ATCC 21756]
          Length = 1055

 Score =  136 bits (342), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 98/258 (37%), Gaps = 18/258 (6%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +G F+     ++ S V+ +        D+  A       + +        SP+ + VA
Sbjct: 10  SRRGLFSLGGGAIAVSGVATLTPPVARAADQPLAADSSPVTATEGTNICATVSPDGRTVA 69

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +      D+  +  +        +R+ +    I  P +S +G        +D    ++++
Sbjct: 70  F------DVYAMLWLVPIEGGPARRLTDEIYEIAQPDWSPDGSTLAFQSYRDGNFHVWTI 123

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                   + T   F      +SPD   I F SDR G+  ++++          S     
Sbjct: 124 GADGRGLMQRTKGAFDCREPRWSPDGKTIAFSSDRGGRYGVHLLDVASGAITPFST-GPG 182

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--------VEDSNLQAPTWSP 399
             F+P WSP G  + FT    +K  I V   DG++  +            ++L +P ++P
Sbjct: 183 DEFEPSWSPDGKSVVFTV---DKVRIDVQGLDGARRTVAKVKPSADRFNAASLASPAFTP 239

Query: 400 SGRSLIFSRKKDGDTGSK 417
            GR ++F+  ++G    +
Sbjct: 240 DGRDVVFTAIENGKAELR 257



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 7/149 (4%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T T   NI A+ SPD   + F+        L+++   G   +R++ D+      P WSP
Sbjct: 49  VTATEGTNICATVSPDGRTVAFDV----YAMLWLVPIEGGPARRLT-DEIYEIAQPDWSP 103

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTG 415
            G  +AF  +    F +  +  DG       +   + + P WSP G+++ FS  + G  G
Sbjct: 104 DGSTLAFQSYRDGNFHVWTIGADGRGLMQRTKGAFDCREPRWSPDGKTIAFSSDRGGRYG 163

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVG 444
             L  +  +G        P    +P W  
Sbjct: 164 VHLLDV-ASGAITPFSTGPGDEFEPSWSP 191



 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 106/302 (35%), Gaps = 38/302 (12%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
             D + ++     +  A  R  A  +               +  +L+ ++  +    ++ 
Sbjct: 238 TPDGRDVVFTAIENGKAELRGAAGVVVAGEDVFPFRPSWLADGTMLYTADGKIKLRKQDG 297

Query: 193 LCVMDRDGAN-----IRYLTPSRDQI---------LFEPRFSPNQQKVAYATYDDEDILR 238
           L       A       RY+  SRD +         +  P  SP+ ++V +       +  
Sbjct: 298 LTGAVAFAATVPVLTPRYVKKSRDFLSAKTRPVVGVGSPALSPDGRQVVF-----RALND 352

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +YL+D     A   I +    +  P +S +GK    S  K   +DI+  D  S  + +LT
Sbjct: 353 LYLLDIGGGPATALIKDAFYKV-DPAWSPDGKTLAYSTDKGGKLDIWLRDTASGESRQLT 411

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                 +S+++S D   I F +   G   L+V+       +R+          P W P  
Sbjct: 412 RFDGAAVSSAWSRDGKSIAFLNQNGG---LFVVDVASGQTRRV-YGDLWEPGKPTWGPGD 467

Query: 359 DLIAF-------TKFSGEKFAIGVMKKDGSQER---LLVE----DSNLQAPTWSPSGRSL 404
             IA+        +F      I  +  +  +     +L +          P WSP G+SL
Sbjct: 468 RTIAYAAFKPYSARFREGLSEILTVDVESGKGTYQPILPDRSLGTRGDDGPVWSPDGKSL 527

Query: 405 IF 406
            +
Sbjct: 528 AY 529



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 98/283 (34%), Gaps = 28/283 (9%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           D   + T       S  L      V     N L ++D  G               +P +S
Sbjct: 321 DFLSAKTRPVVGVGSPALSPDGRQVVFRALNDLYLLDI-GGGPATALIKDAFYKVDPAWS 379

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + +AY+T D    L ++L DT      +++  F    ++  +S +GK      Q   
Sbjct: 380 PDGKTLAYST-DKGGKLDIWLRDTASGE-SRQLTRFDGAAVSSAWSRDGKSIAFLNQNGG 437

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------REGKEQLYVMQS 333
              ++ VD+ S  T R+   L+     ++ P    I + +        REG  ++  +  
Sbjct: 438 ---LFVVDVASGQTRRVYGDLWEPGKPTWGPGDRTIAYAAFKPYSARFREGLSEILTVDV 494

Query: 334 NGSDQ--KRISQD---KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLL 386
                  + I  D          PVWSP G  +A+      +  +  + + G        
Sbjct: 495 ESGKGTYQPILPDRSLGTRGDDGPVWSPDGKSLAYV--FASRLHVSPVDETGKLLGPPKA 552

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           + D    A +WS  G SLI+          +L  I   G    
Sbjct: 553 LNDELTDAVSWSGDGNSLIYVS------AGELRLISAGGGAPR 589



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/364 (15%), Positives = 111/364 (30%), Gaps = 87/364 (23%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           A  ++D+IY+    +     S + F S    +      +  +  DG  +   T       
Sbjct: 86  ARRLTDEIYEIAQPDWSPDGSTLAFQSYRDGN----FHVWTIGADGRGLMQRTKG-AFDC 140

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            EPR+SP+ + +A+++ D      V+L+D                   P +S +GK  + 
Sbjct: 141 REPRWSPDGKTIAFSS-DRGGRYGVHLLDVASGAIT-PFSTGPGDEFEPSWSPDGKSVVF 198

Query: 275 -------------------------------------SVQKDEAMDIYSVDLQSNATERL 297
                                                +   D    +++      A  R 
Sbjct: 199 TVDKVRIDVQGLDGARRTVAKVKPSADRFNAASLASPAFTPDGRDVVFTAIENGKAELRG 258

Query: 298 TNT---LFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQ------KRIS--- 342
                    ++     S+  D + +++ +D  GK +L                  ++   
Sbjct: 259 AAGVVVAGEDVFPFRPSWLADGT-MLYTAD--GKIKLRKQDGLTGAVAFAATVPVLTPRY 315

Query: 343 -----------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                               P  SP G  + F   +     + ++   G     L++D+ 
Sbjct: 316 VKKSRDFLSAKTRPVVGVGSPALSPDGRQVVFRALND----LYLLDIGGGPATALIKDAF 371

Query: 392 LQA-PTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQWV------ 443
            +  P WSP G++L +S  K G     ++  D  +G +  L      A    W       
Sbjct: 372 YKVDPAWSPDGKTLAYSTDKGGK--LDIWLRDTASGESRQLTRFDGAAVSSAWSRDGKSI 429

Query: 444 GFMD 447
            F++
Sbjct: 430 AFLN 433



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 65/332 (19%), Positives = 105/332 (31%), Gaps = 52/332 (15%)

Query: 145 FSSPASWRKIAHTI---SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
           FSS    R   H +   S  I    TG   +F        +SVV  + K  + V   DGA
Sbjct: 154 FSSDRGGRYGVHLLDVASGAITPFSTGPGDEFEPSWSPDGKSVVFTVDKVRIDVQGLDGA 213

Query: 202 NI------RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                             L  P F+P+ + V +   ++               A   +  
Sbjct: 214 RRTVAKVKPSADRFNAASLASPAFTPDGRDVVFTAIENGKAE-------LRGAAGVVVAG 266

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT------ERLTNT---LFIN-- 304
                  P + ++G         D  + +   D  + A         LT        +  
Sbjct: 267 EDVFPFRPSWLADGTML---YTADGKIKLRKQDGLTGAVAFAATVPVLTPRYVKKSRDFL 323

Query: 305 ----------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                      S + SPD  Q+VF +       LY++   G     + +D      DP W
Sbjct: 324 SAKTRPVVGVGSPALSPDGRQVVFRA----LNDLYLLDIGGGPATALIKDAFYKV-DPAW 378

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD 413
           SP G  +A++   G K  I +      + R L   D    +  WS  G+S+ F  +  G 
Sbjct: 379 SPDGKTLAYSTDKGGKLDIWLRDTASGESRQLTRFDGAAVSSAWSRDGKSIAFLNQNGG- 437

Query: 414 TGSKLYSIDLNGRNETLINTPAYAS-DPQWVG 444
               L+ +D+       +    +    P W  
Sbjct: 438 ----LFVVDVASGQTRRVYGDLWEPGKPTWGP 465


>gi|221632929|ref|YP_002522151.1| acylaminoacyl-peptidase [Thermomicrobium roseum DSM 5159]
 gi|221156779|gb|ACM05906.1| acylaminoacyl-peptidase [Thermomicrobium roseum DSM 5159]
          Length = 309

 Score =  135 bits (341), Expect = 9e-30,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 27/238 (11%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-------------MILA 262
             R+SP+ ++VA+    D     +Y+ DT      +   N                  L+
Sbjct: 51  WARWSPDGRRVAFVRLGDA-YSDLYIADTSTGEIRQLTRNRPPFTPGSYEYVQNAVWALS 109

Query: 263 PRFSSNGKRALISVQKDEAMD-IYSVDLQSNATERL--TNTLFINIS-ASYSPDSSQIVF 318
           P +S +G+R +    ++   + ++ +       E +  T  L  N+   ++SPD S+IVF
Sbjct: 110 PAWSPDGQRLVYVSDRNTLKNFLWLIPSAGGTPELIQATTRLGDNVDQPAFSPDGSRIVF 169

Query: 319 ---ESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               +  +G ++   L+++     +   + Q  +  Y  P WSP G  I +    GE   
Sbjct: 170 IHRVTREDGLQRRTDLWIVDLRSGNLTPLVQGGDGQY-APAWSPDGQWIVYVGRHGESND 228

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-KKDGDTGSKL-YSIDLNGRNE 428
           + ++   G Q   + +   + +PTWSP GR++ + + ++DG     L   I  +GR +
Sbjct: 229 LFLVPAMGGQPIQITDSGVVASPTWSPDGRAIAYLQLERDGFAVYVLELRIGADGRPQ 286



 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/224 (20%), Positives = 85/224 (37%), Gaps = 27/224 (12%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-------------ILFEPRFSPN 222
           R+ FV      G   + L + D     IR LT +R                   P +SP+
Sbjct: 60  RVAFVRL----GDAYSDLYIADTSTGEIRQLTRNRPPFTPGSYEYVQNAVWALSPAWSPD 115

Query: 223 QQKVAYATYDD--EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---SVQ 277
            Q++ Y +  +  ++ L +           +        +  P FS +G R +      +
Sbjct: 116 GQRLVYVSDRNTLKNFLWLIPSAGGTPELIQATTRLGDNVDQPAFSPDGSRIVFIHRVTR 175

Query: 278 KDE---AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +D      D++ VDL+S     L        + ++SPD   IV+         L+++ + 
Sbjct: 176 EDGLQRRTDLWIVDLRSGNLTPLVQGGDGQYAPAWSPDGQWIVYVGRHGESNDLFLVPAM 235

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           G    +I+         P WSP G  IA+ +   + FA+ V++ 
Sbjct: 236 GGQPIQIT--DSGVVASPTWSPDGRAIAYLQLERDGFAVYVLEL 277



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 76/186 (40%), Gaps = 30/186 (16%)

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--- 346
           ++  T RL   L     A +SPD  ++ F    +    LY+  ++  + +++++++    
Sbjct: 36  ENGKTRRLLQ-LGDAAWARWSPDGRRVAFVRLGDAYSDLYIADTSTGEIRQLTRNRPPFT 94

Query: 347 -ASY---------FDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVEDS----N 391
             SY           P WSP G  + +          + ++   G    L+   +    N
Sbjct: 95  PGSYEYVQNAVWALSPAWSPDGQRLVYVSDRNTLKNFLWLIPSAGGTPELIQATTRLGDN 154

Query: 392 LQAPTWSPSGRSLIF----SRKKDGDTGSKLYSIDLNGRNETLINT-------PAYASDP 440
           +  P +SP G  ++F    +R+      + L+ +DL   N T +         PA++ D 
Sbjct: 155 VDQPAFSPDGSRIVFIHRVTREDGLQRRTDLWIVDLRSGNLTPLVQGGDGQYAPAWSPDG 214

Query: 441 QWVGFM 446
           QW+ ++
Sbjct: 215 QWIVYV 220



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 28/137 (20%)

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV------ED 389
              +R+ Q  +A++    WSP G  +AF +       + +      + R L         
Sbjct: 38  GKTRRLLQLGDAAWA--RWSPDGRRVAFVRLGDAYSDLYIADTSTGEIRQLTRNRPPFTP 95

Query: 390 SNLQ---------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI--------- 431
            + +         +P WSP G+ L++   ++    + L+ I   G    LI         
Sbjct: 96  GSYEYVQNAVWALSPAWSPDGQRLVYVSDRN-TLKNFLWLIPSAGGTPELIQATTRLGDN 154

Query: 432 -NTPAYASDPQWVGFMD 447
            + PA++ D   + F+ 
Sbjct: 155 VDQPAFSPDGSRIVFIH 171


>gi|91791380|ref|YP_561031.1| amidohydrolase [Shewanella denitrificans OS217]
 gi|91713382|gb|ABE53308.1| amidohydrolase [Shewanella denitrificans OS217]
          Length = 1065

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 76/206 (36%), Gaps = 25/206 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               +    S +G+  +  +  D    IY + +     + L   +   +   YSPD   I
Sbjct: 53  EGTWMNVSVSPDGEHIVFDLLGD----IYQMPISGGDAKPLAKGIAWQMQPVYSPDGKYI 108

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKF 371
            F SD +G + ++VM ++GS+   ++++       P WSP    +          S    
Sbjct: 109 AFTSDEDGGDNIWVMNADGSNPHPVTKETFRLLNSPAWSPDSQYLVARKHFTASRSLGAG 168

Query: 372 AIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLY 419
            + +    G +   L E  N Q     P +SP GR + FS+            D+ S +Y
Sbjct: 169 EVWLYHVAGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVSGIY 228

Query: 420 SI----DLNGRNETLINTPAYASDPQ 441
            I       G  E L+     A  P 
Sbjct: 229 KIKRYDTQTGDIEILVEGTGGAIRPT 254



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 88/228 (38%), Gaps = 30/228 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + + +    D     +Y M        K +    +  + P +S +GK    +  
Sbjct: 60  SVSPDGEHIVFDLLGD-----IYQMPI-SGGDAKPLAKGIAWQMQPVYSPDGKYIAFTSD 113

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVM 331
           +D   +I+ ++   +    +T   F +  S ++SPDS  +V    F + R  G  ++++ 
Sbjct: 114 EDGGDNIWVMNADGSNPHPVTKETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLY 173

Query: 332 QSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVM 376
              G +  ++++         +P +SP G  I F++                  + I   
Sbjct: 174 HVAGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVSGIYKIKRY 233

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   +LVE       PT SP G+ L + ++      S LY +DL
Sbjct: 234 DTQTGDIEILVEGTGGAIRPTPSPDGKKLAYIKRDG--FQSSLYLLDL 279



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 93/270 (34%), Gaps = 36/270 (13%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +      +   +   +  M   G + + L         +P +SP+ + +A+ 
Sbjct: 53  EGTWMNVSVSPDGEHIVFDLLGDIYQMPISGGDAKPLAKG-IAWQMQPVYSPDGKYIAFT 111

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           + +D       +     +  P     FR +  +P +S + +  +     +  +   A ++
Sbjct: 112 SDEDGGDNIWVMNADGSNPHPVTKETFRLLN-SPAWSPDSQYLVARKHFTASRSLGAGEV 170

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESD-------------REGKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 171 WLYHVAGGEGVKLTERPNDQKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVSGIYKI 230

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   D + I  +       P  SP G  +A+ K  G + ++ ++     +   L  
Sbjct: 231 KRYDTQTGDIE-ILVEGTGGAIRPTPSPDGKKLAYIKRDGFQSSLYLLDLQSGETNKLYA 289

Query: 389 --DSNLQA--------PT--WSPSGRSLIF 406
             D ++Q         P+  W+    S++F
Sbjct: 290 ELDRDMQETWAIHGVYPSMAWTQDNSSIVF 319



 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 62/336 (18%), Positives = 120/336 (35%), Gaps = 49/336 (14%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLT--PSR 210
            H ++ + ++ +       +S+ L      +    +    + +    G     LT  P+ 
Sbjct: 130 PHPVTKETFRLLNSPAWSPDSQYLVARKHFTASRSLGAGEVWLYHVAGGEGVKLTERPND 189

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID-----------RAPKRIGNFRSM 259
            + L EP +SP+ + + ++  D       Y  D+                 + +      
Sbjct: 190 QKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVSGIYKIKRYDTQTGDIEILVEGTGG 249

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----------SAS 308
            + P  S +GK+     +      +Y +DLQS  T +L   L  ++           S +
Sbjct: 250 AIRPTPSPDGKKLAYIKRDGFQSSLYLLDLQSGETNKLYAELDRDMQETWAIHGVYPSMA 309

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQK-------------RISQDKEASYFD---- 351
           ++ D+S IVF + +    +L +   + SD               R +Q+ +   FD    
Sbjct: 310 WTQDNSSIVFWA-KGKINKLKLKDLSVSDIPFKVKAQLDIQPSVRFTQNLDQDKFDVKML 368

Query: 352 --PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSR 408
                SP G  + F      K  I  ++ D  +    L +D N   P WS  G+ ++F+ 
Sbjct: 369 RMAQVSPDGKKVVFEAL--GKLWIRDIENDTQERLTRLDDDINELFPQWSRDGKQIVFTT 426

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             D D G+        G+   L + P    +P +  
Sbjct: 427 WNDQDQGTVSLISARGGKATRLTSEPGKYVEPTFAP 462



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 107/271 (39%), Gaps = 33/271 (12%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGAN---IRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             R+  VS      + +    +  RD  N    R      D     P++S + +++ + T
Sbjct: 367 MLRMAQVSPDGKKVVFEALGKLWIRDIENDTQERLTRLDDDINELFPQWSRDGKQIVFTT 426

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------- 283
           ++D+D   V L+  R  +A  R+ +     + P F+ NG+  +        +        
Sbjct: 427 WNDQDQGTVSLISARGGKAT-RLTSEPGKYVEPTFAPNGQFVVYRKANGGNITPRTWSQE 485

Query: 284 --IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +Y VD++     ++T        A +  D+ +I F  ++    QL  ++ +G D KR+
Sbjct: 486 TGLYKVDVKGKQNTKIT---AEGYQAQFGADTDRIFFM-EQGETPQLSSIRIDGFD-KRV 540

Query: 342 SQDKEASYFDPVWSPQGDLIAF--------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
               E +  +   SP G+ +AF        T F+     I +  K  +   + +     +
Sbjct: 541 HYTSEHA-TEFRVSPDGEHLAFAERFRVYVTPFAKHGETIAIGPKASNLPVIQLSTRAGE 599

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           + +W  +  +L ++       G +LY   ++
Sbjct: 600 SISWGNNSDNLYWT------LGPELYQAKVD 624



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 94/253 (37%), Gaps = 43/253 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------------ 265
            ++ +   + +  +    I ++ L D  +   P ++     +  + RF            
Sbjct: 309 AWTQDNSSIVF--WAKGKINKLKLKDLSVSDIPFKVKAQLDIQPSVRFTQNLDQDKFDVK 366

Query: 266 -------SSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQI 316
                  S +GK+ +          ++  D++++  ERLT  +     +   +S D  QI
Sbjct: 367 MLRMAQVSPDGKKVVFEA----LGKLWIRDIENDTQERLTRLDDDINELFPQWSRDGKQI 422

Query: 317 VFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---- 371
           VF +  +  +  + ++ + G    R++ +    Y +P ++P G  + + K +G       
Sbjct: 423 VFTTWNDQDQGTVSLISARGGKATRLTSE-PGKYVEPTFAPNGQFVVYRKANGGNITPRT 481

Query: 372 -----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +  +   G Q   +  +       +      + F  +       +L SI ++G 
Sbjct: 482 WSQETGLYKVDVKGKQNTKITAEGYQA--QFGADTDRIFFMEQ---GETPQLSSIRIDGF 536

Query: 427 NETLINTPAYASD 439
           ++ +  T  +A++
Sbjct: 537 DKRVHYTSEHATE 549


>gi|320104230|ref|YP_004179821.1| WD40-like beta Propeller containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319751512|gb|ADV63272.1| WD40-like beta Propeller containing protein [Isosphaera pallida
           ATCC 43644]
          Length = 327

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 75/162 (46%), Gaps = 4/162 (2%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYL----MDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            P +S +  K+ +A+  + +    ++         D  P R+     +   P ++ +G+R
Sbjct: 158 WPNWSADGSKLVFASTHEGNQEIHWIAWSDDPDAPDSQPHRVTRHPGIDTQPCWTPDGQR 217

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +    +   +++   DL+ +  ERLT    I+ S   SPD   I F + REG  +++VM
Sbjct: 218 IVFVTDRWGGLELAITDLEGHRVERLTRQPGIDDSPDVSPDGRWIAFTTFREGMAEVFVM 277

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +GS+ + +S++ E     P W+P G  + F      ++ +
Sbjct: 278 GIDGSNPRNLSRNPEGHDMHPRWTPDGRGVTFCTQRQGRWEL 319



 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 63/273 (23%), Positives = 107/273 (39%), Gaps = 27/273 (9%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGA------NIRYLTPSRDQILFEPRFSPNQQKVA-- 227
           R+++ S     G I   LC +  D          + L P RD   F+   SP  Q     
Sbjct: 58  RLIYASMEPDGGSIH--LCQLQVDHPFDATRRQPKRLFPDRDDPEFQAVPSPQSQSPWLA 115

Query: 228 ---YATYDDEDILRVYLMDTRIDRAPKR--IGNFRSMILA---PRFSSNGKRALISVQKD 279
                    +  L +   D   +    R  +GN    +     P +S++G + + +   +
Sbjct: 116 VTRVTRSGTQGDLDLVAFDLTSNPPRSRGIMGNVEGRLSHQEWPNWSADGSKLVFASTHE 175

Query: 280 EAMDIYSV------DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              +I+ +      D   +   R+T    I+    ++PD  +IVF +DR G  +L +   
Sbjct: 176 GNQEIHWIAWSDDPDAPDSQPHRVTRHPGIDTQPCWTPDGQRIVFVTDRWGGLELAITDL 235

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SN 391
            G   +R+++ +      P  SP G  IAFT F      + VM  DGS  R L  +   +
Sbjct: 236 EGHRVERLTR-QPGIDDSPDVSPDGRWIAFTTFREGMAEVFVMGIDGSNPRNLSRNPEGH 294

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              P W+P GR + F  ++ G       ++  N
Sbjct: 295 DMHPRWTPDGRGVTFCTQRQGRWELVTLAVPTN 327



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 58/299 (19%), Positives = 120/299 (40%), Gaps = 41/299 (13%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI- 236
           L +S  V +G   +       +G  +R+     ++  F P +S + +++ YA+ + +   
Sbjct: 13  LALSLMVWTGGTPSGRAEDRWEGPGVRHTFDGLEK--FRPVWSADGRRLIYASMEPDGGS 70

Query: 237 -----LRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQK------DEAMDI 284
                L+V        R PKR+   R         S   +   ++V +         +D+
Sbjct: 71  IHLCQLQVDHPFDATRRQPKRLFPDRDDPEFQAVPSPQSQSPWLAVTRVTRSGTQGDLDL 130

Query: 285 YSVDLQSNATE----------RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM--- 331
            + DL SN             RL++  +     ++S D S++VF S  EG ++++ +   
Sbjct: 131 VAFDLTSNPPRSRGIMGNVEGRLSHQEW----PNWSADGSKLVFASTHEGNQEIHWIAWS 186

Query: 332 ---QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLV 387
               +  S   R+++        P W+P G  I F         + +   +G   ERL  
Sbjct: 187 DDPDAPDSQPHRVTR-HPGIDTQPCWTPDGQRIVFVTDRWGGLELAITDLEGHRVERLTR 245

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYASDPQWVG 444
           +     +P  SP GR + F+  ++G   ++++ + ++G N   ++     +   P+W  
Sbjct: 246 QPGIDDSPDVSPDGRWIAFTTFREG--MAEVFVMGIDGSNPRNLSRNPEGHDMHPRWTP 302



 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 22/164 (13%), Positives = 65/164 (39%), Gaps = 4/164 (2%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           S+++F S    +  I       D D  + + +       I  +P ++P+ Q++ + T   
Sbjct: 166 SKLVFASTHEGNQEIHWIAWSDDPDAPDSQPHRVTRHPGIDTQPCWTPDGQRIVFVTDRW 225

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
             +     +        +R+     +  +P  S +G+    +  ++   +++ + +  + 
Sbjct: 226 GGLE--LAITDLEGHRVERLTRQPGIDDSPDVSPDGRWIAFTTFREGMAEVFVMGIDGSN 283

Query: 294 TERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              L+      ++   ++PD   + F + R+G+ +L  +    +
Sbjct: 284 PRNLSRNPEGHDMHPRWTPDGRGVTFCTQRQGRWELVTLAVPTN 327



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNS----LCVMDRDGANIRYLTPSRDQILFEPR 218
            + +T + G  +S  +      ++          + VM  DG+N R L+ + +     PR
Sbjct: 240 VERLTRQPGIDDSPDVSPDGRWIAFTTFREGMAEVFVMGIDGSNPRNLSRNPEGHDMHPR 299

Query: 219 FSPNQQKVAYATYDDEDILRVYL 241
           ++P+ + V + T        V L
Sbjct: 300 WTPDGRGVTFCTQRQGRWELVTL 322


>gi|298242339|ref|ZP_06966146.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297555393|gb|EFH89257.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 682

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 60/329 (18%), Positives = 107/329 (32%), Gaps = 87/329 (26%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFR 257
           NI      R Q +  PR SP+ ++VAY     +D    Y     I        +R     
Sbjct: 4   NITIEDLYRMQFIDRPRISPDGKQVAYVVTRIDDKKHAYRSSIWISPTEGGEARRFTQET 63

Query: 258 SMILAPRFSSNGKRALISVQKD------------------EAMDIYSVDLQSNATERLTN 299
            +  AP +S +G+      +++                  +   I+ +        +LT 
Sbjct: 64  ELTSAPTWSPDGRWLAFVAKRESSDQPSTTEKKEQKKPGKDKPQIWVMPTDGGEARQLTF 123

Query: 300 TLFINISASYSPDSSQIVFESDRE---------------------------------GKE 326
                 S ++SPD   ++F +                                     + 
Sbjct: 124 MEHGASSPAWSPDGKHLLFSAQVGPADEETEDGKALPKVHVIDQLWYRLDGVGFIYERRA 183

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDG 380
            L+++   G + ++++ D + +  D  WSP G  I FT    E         I V+    
Sbjct: 184 HLFLIPREGGEPQQLT-DGDWNDGDAAWSPDGKQITFTSDRNEERWRIPGADIYVLALQD 242

Query: 381 ----SQERLLVEDS-NLQAPTWSPSGRSLIF--SRKKDGDTGSKLYSIDLN---GRNETL 430
                + R+L + S    +P+WS  G+ + F  S+K      + LY+I  +   G  + L
Sbjct: 243 NKVVGEPRVLTDGSMGCASPSWSADGQQIAFIASKKVGSAGHAYLYTIGASAEKGEPKNL 302

Query: 431 IN---------TPAYASD------PQWVG 444
                      T +   D      P W  
Sbjct: 303 TPEFEGTALDFTNSDLGDEHLMPQPAWSA 331



 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 112/343 (32%), Gaps = 87/343 (25%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---- 233
           +           ++S+ +   +G   R  T   + +   P +SP+ + +A+    +    
Sbjct: 31  VVTRIDDKKHAYRSSIWISPTEGGEARRFTQETE-LTSAPTWSPDGRWLAFVAKRESSDQ 89

Query: 234 -------------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
                        +D  ++++M T      +++        +P +S +GK  L S Q   
Sbjct: 90  PSTTEKKEQKKPGKDKPQIWVMPTD-GGEARQLTFMEHGASSPAWSPDGKHLLFSAQVGP 148

Query: 281 AMD---------------------------------IYSVDLQSNATERLTNTLFINISA 307
           A +                                 ++ +  +    ++LT+  + +  A
Sbjct: 149 ADEETEDGKALPKVHVIDQLWYRLDGVGFIYERRAHLFLIPREGGEPQQLTDGDWNDGDA 208

Query: 308 SYSPDSSQIVFESDRE------GKEQLYVMQSNGS---DQKRISQDKEASYFDPVWSPQG 358
           ++SPD  QI F SDR           +YV+    +    + R+  D       P WS  G
Sbjct: 209 AWSPDGKQITFTSDRNEERWRIPGADIYVLALQDNKVVGEPRVLTDGSMGCASPSWSADG 268

Query: 359 DLIAF--TKFSGEKFAIGVM----KKDGSQERLLV----------------EDSNLQAPT 396
             IAF  +K  G      +       +  + + L                 ++  +  P 
Sbjct: 269 QQIAFIASKKVGSAGHAYLYTIGASAEKGEPKNLTPEFEGTALDFTNSDLGDEHLMPQPA 328

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLN--GRNETLINTPAYA 437
           WS  G++L       G   S++Y+I        E    TP   
Sbjct: 329 WSADGKTLYVLSSHRG--ASRIYAISTTNGAGKEPPTVTPGNV 369



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 78/236 (33%), Gaps = 33/236 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY-------- 240
            +  L ++ R+G   + LT   D    +  +SP+ +++ + +  +E+  R+         
Sbjct: 181 RRAHLFLIPREGGEPQQLTDG-DWNDGDAAWSPDGKQITFTSDRNEERWRIPGADIYVLA 239

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD----EAMDIYSV--DLQSNAT 294
           L D ++   P+ + +      +P +S++G++      K         +Y++    +    
Sbjct: 240 LQDNKVVGEPRVLTDGSMGCASPSWSADGQQIAFIASKKVGSAGHAYLYTIGASAEKGEP 299

Query: 295 ERLT---NTLFINI------------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + LT       ++               ++S D   +   S   G  ++Y + +     K
Sbjct: 300 KNLTPEFEGTALDFTNSDLGDEHLMPQPAWSADGKTLYVLSSHRGASRIYAISTTNGAGK 359

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERLLVEDSNL 392
                   +     +S       F     +      I V     + E   +   N 
Sbjct: 360 EPPTVTPGNVHVRDFSLDHSKQIFAMNVADATHPQEIFVRSAKTNGELRKITGFND 415



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 24/63 (38%), Gaps = 11/63 (17%)

Query: 395 PTWSPSGRSLIFSRKKDGD----TGSKLYSIDLNGRNET-------LINTPAYASDPQWV 443
           P  SP G+ + +   +  D      S ++     G           L + P ++ D +W+
Sbjct: 19  PRISPDGKQVAYVVTRIDDKKHAYRSSIWISPTEGGEARRFTQETELTSAPTWSPDGRWL 78

Query: 444 GFM 446
            F+
Sbjct: 79  AFV 81


>gi|170724385|ref|YP_001758411.1| amidohydrolase [Shewanella woodyi ATCC 51908]
 gi|169809732|gb|ACA84316.1| amidohydrolase [Shewanella woodyi ATCC 51908]
          Length = 1069

 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 47/206 (22%), Positives = 79/206 (38%), Gaps = 25/206 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               +    S +GK  +     D   DIY + ++    + L   +   +   YSPD   I
Sbjct: 53  EGTWMNVSVSPDGKNIVF----DMLGDIYQMPIEGGEAKVLAEGIAWQMQPVYSPDGKYI 108

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FT-KFSGEKF 371
            F SD +G + +++M+++GS  + ++++       P WSP    +     +T   S    
Sbjct: 109 AFTSDEDGGDNIWIMEADGSKPRAVTEETFRLLNSPAWSPDSQYLVARKHYTGSRSLGAG 168

Query: 372 AIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLY 419
            + +    G +   L E  N Q     P +SP GR + FS+            D+   +Y
Sbjct: 169 EVWMYHVAGGEGVKLTERPNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVKGIY 228

Query: 420 SI----DLNGRNETLINTPAYASDPQ 441
            I       G  E LI     A  P 
Sbjct: 229 KIKRYDTQTGDIEVLIEGTGGAIRPT 254



 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 94/236 (39%), Gaps = 31/236 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + + +    D     +Y M        K +    +  + P +S +GK    +  
Sbjct: 60  SVSPDGKNIVFDMLGD-----IYQMPIE-GGEAKVLAEGIAWQMQPVYSPDGKYIAFTSD 113

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVM 331
           +D   +I+ ++   +    +T   F +  S ++SPDS  +V    +   R  G  ++++ 
Sbjct: 114 EDGGDNIWIMEADGSKPRAVTEETFRLLNSPAWSPDSQYLVARKHYTGSRSLGAGEVWMY 173

Query: 332 QSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVM 376
              G +  +++   +++    +P +SP G  I F++ +                + I   
Sbjct: 174 HVAGGEGVKLTERPNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVKGIYKIKRY 233

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
                   +L+E       PT SP G  L + ++      S LY +DL +G+ + L
Sbjct: 234 DTQTGDIEVLIEGTGGAIRPTPSPDGTKLAYIKRDG--FQSSLYLLDLKSGKIDKL 287



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 62/310 (20%), Positives = 114/310 (36%), Gaps = 35/310 (11%)

Query: 122 DRLRVEFRLWDVKDRK--QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN--SRI 177
           D  +    L D+K  K  ++ GK       +W    H +   +  +   E+  F    +I
Sbjct: 268 DGFQSSLYLLDLKSGKIDKLYGKLDRDMQETW--AIHGVYPSMSWTSDNEEIVFWAGGKI 325

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ------ILFEPRFSPNQQKVAYATY 231
             +     S            D       T + DQ      +L   + SP+ +KV Y   
Sbjct: 326 NKLDVESKSVKQIPFSIKTKLDVQPAVRFTQNLDQDKFDVKMLRMAQVSPDGKKVVY--- 382

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQKDEAM-DIYSVD 288
              + L    + +  +    R+    S    L P++S +GK  + S   DE    I  V+
Sbjct: 383 ---EALGKLWVKSLSNGKRTRLTKLDSELRELFPQWSRDGKSIVFSTWDDEEQGSIRIVN 439

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQLYVMQSNGSDQK 339
           +++   + LT      +  ++SPD S +V+   + G            LY +   G +  
Sbjct: 440 VRNKRVKTLTKEPGKYVEPTFSPDGSFVVYRKAKGGYITPRTWSQETGLYRVDIKGKESI 499

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           +I+ D     + P +    D + F    GE   +  +  +G Q+R+     +      SP
Sbjct: 500 KITPDG----YQPQFGADSDRVYFMDH-GETPELASINLNGFQKRVHYTSKHATEFRVSP 554

Query: 400 SGRSLIFSRK 409
            G+ L F+ +
Sbjct: 555 DGKQLAFAER 564



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 59/314 (18%), Positives = 117/314 (37%), Gaps = 57/314 (18%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             S  S      +   D    +I  L       +  P  SP+  K+AY   D      +Y
Sbjct: 218 HYSKDSVKGIYKIKRYDTQTGDIEVLIEGTGGAI-RPTPSPDGTKLAYIKRD-GFQSSLY 275

Query: 241 LMDTRIDRAPKRIGNFR----------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           L+D +  +  K  G              +  +  ++S+ +  +          I  +D++
Sbjct: 276 LLDLKSGKIDKLYGKLDRDMQETWAIHGVYPSMSWTSDNEEIVFWA----GGKINKLDVE 331

Query: 291 SNATERLTNT--LFINISASY---------------------SPDSSQIVFESDREGKEQ 327
           S + +++  +    +++  +                      SPD  ++V+E+      +
Sbjct: 332 SKSVKQIPFSIKTKLDVQPAVRFTQNLDQDKFDVKMLRMAQVSPDGKKVVYEA----LGK 387

Query: 328 LYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERL 385
           L+V   +   + R+++ D E     P WS  G  I F+ +  E + +I ++     + + 
Sbjct: 388 LWVKSLSNGKRTRLTKLDSELRELFPQWSRDGKSIVFSTWDDEEQGSIRIVNVRNKRVKT 447

Query: 386 LV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-------LYSIDLNGRNETLIN----T 433
           L  E      PT+SP G  +++ + K G    +       LY +D+ G+    I      
Sbjct: 448 LTKEPGKYVEPTFSPDGSFVVYRKAKGGYITPRTWSQETGLYRVDIKGKESIKITPDGYQ 507

Query: 434 PAYASDPQWVGFMD 447
           P + +D   V FMD
Sbjct: 508 PQFGADSDRVYFMD 521



 Score = 93.5 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 104/296 (35%), Gaps = 42/296 (14%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +      +   +   +  M  +G   + L         +P +SP+ + +A+ 
Sbjct: 53  EGTWMNVSVSPDGKNIVFDMLGDIYQMPIEGGEAKVLAEG-IAWQMQPVYSPDGKYIAFT 111

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           + D++    +++M+    +          ++ +P +S + +  +     +  +   A ++
Sbjct: 112 S-DEDGGDNIWIMEADGSKPRAVTEETFRLLNSPAWSPDSQYLVARKHYTGSRSLGAGEV 170

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDRE-------------GKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 171 WMYHVAGGEGVKLTERPNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVKGIYKI 230

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   D + +  +       P  SP G  +A+ K  G + ++ ++     +   L  
Sbjct: 231 KRYDTQTGDIEVLI-EGTGGAIRPTPSPDGTKLAYIKRDGFQSSLYLLDLKSGKIDKLYG 289

Query: 389 --DSNLQ----------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             D ++Q          + +W+     ++F        G K+  +D+  ++   I 
Sbjct: 290 KLDRDMQETWAIHGVYPSMSWTSDNEEIVFWA------GGKINKLDVESKSVKQIP 339



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 55/328 (16%), Positives = 112/328 (34%), Gaps = 61/328 (18%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQK 225
               D    +     +    +    + +    G     LT  P+  + L EP +SP+ + 
Sbjct: 145 AWSPDSQYLVARKHYTGSRSLGAGEVWMYHVAGGEGVKLTERPNEQKDLGEPAYSPDGRY 204

Query: 226 VA------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +             Y+    + I ++   DT+     + +       + P  S +G +  
Sbjct: 205 IYFSQDATPGKTFHYSKDSVKGIYKIKRYDTQTGD-IEVLIEGTGGAIRPTPSPDGTKLA 263

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----------SASYSPDSSQIVFESDR 322
              +      +Y +DL+S   ++L   L  ++           S S++ D+ +IVF +  
Sbjct: 264 YIKRDGFQSSLYLLDLKSGKIDKLYGKLDRDMQETWAIHGVYPSMSWTSDNEEIVFWA-- 321

Query: 323 EGKEQLYVMQSNGSDQKRI----------------SQDKEASYFD------PVWSPQGDL 360
               ++  +       K+I                +Q+ +   FD         SP G  
Sbjct: 322 --GGKINKLDVESKSVKQIPFSIKTKLDVQPAVRFTQNLDQDKFDVKMLRMAQVSPDGKK 379

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           + +         + V      +   L     +     P WS  G+S++FS   D + GS 
Sbjct: 380 VVYEALG----KLWVKSLSNGKRTRLTKLDSELRELFPQWSRDGKSIVFSTWDDEEQGS- 434

Query: 418 LYSIDL-NGRNETLINTPAYASDPQWVG 444
           +  +++ N R +TL   P    +P +  
Sbjct: 435 IRIVNVRNKRVKTLTKEPGKYVEPTFSP 462



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 9/103 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRS 403
            E ++ +   SP G  I F         I  M  +G + ++L E    Q  P +SP G+ 
Sbjct: 52  TEGTWMNVSVSPDGKNIVFDMLGD----IYQMPIEGGEAKVLAEGIAWQMQPVYSPDGKY 107

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
           + F+  +DG  G  ++ ++ +G     +    +   + P W  
Sbjct: 108 IAFTSDEDG--GDNIWIMEADGSKPRAVTEETFRLLNSPAWSP 148


>gi|115380583|ref|ZP_01467536.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
 gi|115362407|gb|EAU61689.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
          Length = 655

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/206 (23%), Positives = 83/206 (40%), Gaps = 25/206 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               ++   S  G   +  +  D    +Y++ +     + LT     ++   YSPD + I
Sbjct: 43  EGTWMSVDVSPKGDELVFDLLGD----LYTLPIAGGEAKALTTGAAWDMQPRYSPDGASI 98

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFSG-EKF 371
            F SDR G + L++M+ +GSD + ++Q+       P WSP    +     F+        
Sbjct: 99  AFTSDRGGGDNLWIMKRDGSDSRPVTQESFRLLNSPTWSPDSQYLVARKHFSSRRSLGAG 158

Query: 372 AIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLY 419
            + +  + G +   L E  N Q     P +SP GR L FS+          + D   ++Y
Sbjct: 159 EMWLYHRAGGEGVQLTERPNDQKDAGEPAFSPDGRFLYFSQDTTPGKVFEYNKDPNGQIY 218

Query: 420 SI---DLNGRN-ETLINTPAYASDPQ 441
            I   +L  +  E  I  P  +  P 
Sbjct: 219 VIQRLNLETKELEPFITGPGGSVRPT 244



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 93/234 (39%), Gaps = 30/234 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP   ++ +      D+L             K +    +  + PR+S +G     +  + 
Sbjct: 52  SPKGDELVF------DLLGDLYTLPIAGGEAKALTTGAAWDMQPRYSPDGASIAFTSDRG 105

Query: 280 EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVMQS 333
              +++ +    + +  +T   F +  S ++SPDS  +V    F S R  G  ++++   
Sbjct: 106 GGDNLWIMKRDGSDSRPVTQESFRLLNSPTWSPDSQYLVARKHFSSRRSLGAGEMWLYHR 165

Query: 334 NGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKF-------------SGEKFAIGVMKK 378
            G +  ++++         +P +SP G  + F++              +G+ + I  +  
Sbjct: 166 AGGEGVQLTERPNDQKDAGEPAFSPDGRFLYFSQDTTPGKVFEYNKDPNGQIYVIQRLNL 225

Query: 379 DGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +  + E  +        PT SP G+SL F R+  G   S L+S DL    E  +
Sbjct: 226 ETKELEPFITGPGGSVRPTPSPDGKSLAFVRRVRGK--SVLFSADLVSGAERPL 277



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 55/295 (18%), Positives = 102/295 (34%), Gaps = 40/295 (13%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + S  +      +   +   L  +   G   + LT        +PR+SP+   +A+ 
Sbjct: 43  EGTWMSVDVSPKGDELVFDLLGDLYTLPIAGGEAKALTTG-AAWDMQPRYSPDGASIAFT 101

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           +          +     D  P    +FR +  +P +S + +  +     S ++   A ++
Sbjct: 102 SDRGGGDNLWIMKRDGSDSRPVTQESFRLLN-SPTWSPDSQYLVARKHFSSRRSLGAGEM 160

Query: 285 YSVDLQSNATERLT---NTLFINISASYSPDSSQI----------VFESDREGKEQLYVM 331
           +          +LT   N        ++SPD   +          VFE +++   Q+YV+
Sbjct: 161 WLYHRAGGEGVQLTERPNDQKDAGEPAFSPDGRFLYFSQDTTPGKVFEYNKDPNGQIYVI 220

Query: 332 QSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           Q    + K +            P  SP G  +AF +    K  +         ER L + 
Sbjct: 221 QRLNLETKELEPFITGPGGSVRPTPSPDGKSLAFVRRVRGKSVLFSADLVSGAERPLFDG 280

Query: 390 ------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                           A  W+P  +SL+F  +       KL  ID+  +  T I 
Sbjct: 281 LDRDMQETWAIHGVYPAMAWTPDSKSLVFWAQ------GKLNRIDVASKRVTPIP 329



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 50/328 (15%), Positives = 102/328 (31%), Gaps = 60/328 (18%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQK 225
               D    +     S    +    + +  R G     LT  P+  +   EP FSP+ + 
Sbjct: 135 TWSPDSQYLVARKHFSSRRSLGAGEMWLYHRAGGEGVQLTERPNDQKDAGEPAFSPDGRF 194

Query: 226 VAYATYD------------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           + ++               +  I  +  ++         I      +  P  S +GK   
Sbjct: 195 LYFSQDTTPGKVFEYNKDPNGQIYVIQRLNLETKELEPFITGPGGSVR-PTPSPDGKSLA 253

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-----------ASYSPDSSQIVFESDR 322
              +      ++S DL S A   L + L  ++             +++PDS  +VF +  
Sbjct: 254 FVRRVRGKSVLFSADLVSGAERPLFDGLDRDMQETWAIHGVYPAMAWTPDSKSLVFWAQ- 312

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDP---------------VW---SPQG 358
               +L  +         I      ++   A    P                W   SP+G
Sbjct: 313 ---GKLNRIDVASKRVTPIPFHVKGTRTLFARVHSPQAQAVVPERFPVKMLRWVQVSPKG 369

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGS 416
           D + +         +   +      R L + +      P++S  G+S++++   D   G+
Sbjct: 370 DRVVYQALG----HLYTRELPDGLPRRLTKQTEHFEMHPSFSRDGKSIVYTTWDDDKLGT 425

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVG 444
                   G  + +   P +  +P +  
Sbjct: 426 VRVVSAGGGEGKVVSAQPGFYLEPAFSP 453



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 93/265 (35%), Gaps = 43/265 (16%)

Query: 218 RFSPNQQKVAYATYDD--------EDILRVYLMDTRIDRAPKRIGNFRSMILAP------ 263
            ++P+ + + +             + +  +            R+ + ++  + P      
Sbjct: 299 AWTPDSKSLVFWAQGKLNRIDVASKRVTPIPFHVKGTRTLFARVHSPQAQAVVPERFPVK 358

Query: 264 --RF---SSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIV 317
             R+   S  G R +          +Y+ +L      RLT  T    +  S+S D   IV
Sbjct: 359 MLRWVQVSPKGDRVVYQA----LGHLYTRELPDGLPRRLTKQTEHFEMHPSFSRDGKSIV 414

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-------- 369
           + +  + K     + S G  + ++   +   Y +P +SP G  I +    G         
Sbjct: 415 YTTWDDDKLGTVRVVSAGGGEGKVVSAQPGFYLEPAFSPDGRSIVYRASGGGYLLPGLYS 474

Query: 370 -KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG--SKLYSIDLNGR 426
               + V+ KDG   R L +D   + P +      + F   + G+     +L SI L+G 
Sbjct: 475 RDPGLYVVGKDGGTPRRLSKDG--EQPHFGAGSDRVYFLAVEGGEKEDKRELRSIGLDGT 532

Query: 427 NETLINTPAYAS------DPQWVGF 445
                 T A  S      D +WV F
Sbjct: 533 APRTHLTSAEVSTYRVSPDERWVAF 557



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 47/120 (39%), Gaps = 10/120 (8%)

Query: 329 YVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + + + G     +  D  E ++     SP+GD + F         +  +   G + + L 
Sbjct: 25  WNVNAPGFPSTEVPLDVTEGTWMSVDVSPKGDELVFDLLGD----LYTLPIAGGEAKALT 80

Query: 388 EDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
             +     P +SP G S+ F+  + G  G  L+ +  +G +   +   ++   + P W  
Sbjct: 81  TGAAWDMQPRYSPDGASIAFTSDRGG--GDNLWIMKRDGSDSRPVTQESFRLLNSPTWSP 138



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 68/244 (27%), Gaps = 63/244 (25%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  +        ++ V+   G   + ++  +     EP FSP+ + + Y           
Sbjct: 413 IVYTTWDDDKLGTVRVVSAGGGEGKVVSA-QPGFYLEPAFSPDGRSIVYR---------- 461

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                          +    +L   +S +               +Y V        RL+ 
Sbjct: 462 --------------ASGGGYLLPGLYSRD-------------PGLYVVGKDGGTPRRLSK 494

Query: 300 TLFINISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                    +   S ++ F +   G    K +L  +  +G+  +  +    A       S
Sbjct: 495 DGE---QPHFGAGSDRVYFLAVEGGEKEDKRELRSIGLDGTAPR--THLTSAEVSTYRVS 549

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT------------WSPSGRS 403
           P    +AF     E F   V       + ++    +   P             WS   + 
Sbjct: 550 PDERWVAF----QEVFNAYVAPLSRGGKTVVASKDSKALPVTRVSRDAGNFLHWSGDSKR 605

Query: 404 LIFS 407
           L ++
Sbjct: 606 LYWA 609


>gi|134105212|pdb|2OJH|A Chain A, The Structure Of Putative Tolb From Agrobacterium
           Tumefaciens
          Length = 297

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 15/203 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+    A +   +     +YL+ +          N  S      +S +GK       +
Sbjct: 92  ISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLXTKNLPSYWHG--WSPDGKSFTYCGIR 149

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D+  DIYS D+ S    RLT+    N    YSPD   I F S R G+ Q++ ++ +GS  
Sbjct: 150 DQVFDIYSXDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQXQIWRVRVDGSSV 209

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVE-- 388
           +RI+      +F P  SP GD + F  +  + F         + +   DG     L +  
Sbjct: 210 ERITDSAYGDWF-PHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLXDXDGGNVETLFDLF 268

Query: 389 --DSNLQAPTWSPSGRSLIFSRK 409
                  +P WSP G    + R 
Sbjct: 269 GGQGTXNSPNWSPDGDEFAYVRY 291



 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 77/188 (40%), Gaps = 14/188 (7%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K+++ ++   G   R    +++   +   +SP+ +   Y    D  +  +Y  D     
Sbjct: 108 GKSAIYLLPSTGGTPR--LXTKNLPSYWHGWSPDGKSFTYCGIRD-QVFDIYSXDIDSGV 164

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              R+ +       P +S +G+    +  +     I+ V +  ++ ER+T++ + +    
Sbjct: 165 ET-RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQXQIWRVRVDGSSVERITDSAYGDWFPH 223

Query: 309 YSPDSSQIVFESD--------REGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQG 358
            SP   ++VF S         R+   ++ +   +G + + +      + +   P WSP G
Sbjct: 224 PSPSGDKVVFVSYDADVFDHPRDLDVRVQLXDXDGGNVETLFDLFGGQGTXNSPNWSPDG 283

Query: 359 DLIAFTKF 366
           D  A+ ++
Sbjct: 284 DEFAYVRY 291



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 78/197 (39%), Gaps = 15/197 (7%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFI-- 303
            R  + +     +  AP +S +GK  L+    +    +Y + L  + + E++        
Sbjct: 31  TRKXRVVWQTPELFEAPNWSPDGKYLLL----NSEGLLYRLSLAGDPSPEKVDTGFATIC 86

Query: 304 NISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           N     SPD +     SD+   GK  +Y++ S G   +  +++  + +    WSP G   
Sbjct: 87  NNDHGISPDGALYA-ISDKVEFGKSAIYLLPSTGGTPRLXTKNLPSYWHG--WSPDGKSF 143

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +     + F I     D   E  L         P +SP GR + F+  + G    +++ 
Sbjct: 144 TYCGIRDQVFDIYSXDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQ--XQIWR 201

Query: 421 IDLNGRNETLINTPAYA 437
           + ++G +   I   AY 
Sbjct: 202 VRVDGSSVERITDSAYG 218



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 27/81 (33%), Gaps = 6/81 (7%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL----CVMDRDGANIRYLTP--SR 210
            I+D  Y            +++FVS           L     + D DG N+  L      
Sbjct: 211 RITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLXDXDGGNVETLFDLFGG 270

Query: 211 DQILFEPRFSPNQQKVAYATY 231
                 P +SP+  + AY  Y
Sbjct: 271 QGTXNSPNWSPDGDEFAYVRY 291


>gi|149186900|ref|ZP_01865209.1| hypothetical protein ED21_22118 [Erythrobacter sp. SD-21]
 gi|148829409|gb|EDL47851.1| hypothetical protein ED21_22118 [Erythrobacter sp. SD-21]
          Length = 1112

 Score =  135 bits (340), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 29/212 (13%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I       +    S +G+    S+  D    IY++ +      R+   L   I   +SPD
Sbjct: 89  IDTDEGTWMDVAVSPDGRTLAFSMLGD----IYTMPVSGGTPTRIAEGLAWEIQPRFSPD 144

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFS 367
            S+I F SDR G + +++M ++GS++++++ +       P WSP G  I       T+ S
Sbjct: 145 GSRIAFISDRGGGDNIWLMNTDGSNKQQVTMEDFRLLNQPSWSPDGRYIVAKKHFTTQRS 204

Query: 368 GEKFAIGVMKKDGSQERLLVEDSN------LQAPTWSPSGRSLIFSRK------------ 409
                I +    G     LV+ ++      L  P ++P G ++ ++R             
Sbjct: 205 AGTGEIWLYHVSGGGGVQLVKRASEAVQKELGEPIYAPDGNAIYYTRNITPGATFEYAQD 264

Query: 410 -KDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
              G    + Y ID  G   T +     A  P
Sbjct: 265 STQGIFNIERYDID-TGEVTTAVGGYGGAVRP 295



 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 58/258 (22%), Positives = 106/258 (41%), Gaps = 35/258 (13%)

Query: 200 GANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           GA +R +    D+  +     SP+ + +A++   D     +Y M       P RI    +
Sbjct: 81  GATMREVAIDTDEGTWMDVAVSPDGRTLAFSMLGD-----IYTMPV-SGGTPTRIAEGLA 134

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQI 316
             + PRFS +G R      +    +I+ ++   +  +++T  +   +N   S+SPD   I
Sbjct: 135 WEIQPRFSPDGSRIAFISDRGGGDNIWLMNTDGSNKQQVTMEDFRLLN-QPSWSPDGRYI 193

Query: 317 V----FESDRE-GKEQLYVMQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
           V    F + R  G  ++++   +G       KR S+  +    +P+++P G+ I +T+  
Sbjct: 194 VAKKHFTTQRSAGTGEIWLYHVSGGGGVQLVKRASEAVQKELGEPIYAPDGNAIYYTRNI 253

Query: 367 ------------SGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGD 413
                       +   F I     D  +    V        P  SP GRS+ F R+    
Sbjct: 254 TPGATFEYAQDSTQGIFNIERYDIDTGEVTTAVGGYGGAVRPVPSPDGRSIAFVRRDKDQ 313

Query: 414 TGSKLYSIDLNGRNETLI 431
             S+L+  DL+   E +I
Sbjct: 314 --SQLWVKDLSTGEERMI 329



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 55/357 (15%), Positives = 117/357 (32%), Gaps = 79/357 (22%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +IA  ++ +I    + +     SRI F+S+          + +M+ DG+N + +T    +
Sbjct: 128 RIAEGLAWEIQPRFSPDG----SRIAFISDRGGGDN----IWLMNTDGSNKQQVTMEDFR 179

Query: 213 ILFEPRFSPNQQKVA----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI----LAPR 264
           +L +P +SP+ + +     + T        ++L         + +      +      P 
Sbjct: 180 LLNQPSWSPDGRYIVAKKHFTTQRSAGTGEIWLYHVSGGGGVQLVKRASEAVQKELGEPI 239

Query: 265 FSSNGKRALISV-------------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           ++ +G     +                    +I   D+ +             +    SP
Sbjct: 240 YAPDGNAIYYTRNITPGATFEYAQDSTQGIFNIERYDIDTGEVTTAVGGYGGAVRPVPSP 299

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRI----------SQDKEASYFDPVWSPQGDLI 361
           D   I F    + + QL+V   +  +++ I          +      Y    W P G  +
Sbjct: 300 DGRSIAFVRRDKDQSQLWVKDLSTGEERMIYGALDLDLQETWAVYGVYPMMDWMPDGKSM 359

Query: 362 AFTKFSGEKFAIGVMKKDGSQER-------------------LLVEDSNLQAPTW---SP 399
               ++G K         GS                      +  +    + P +   SP
Sbjct: 360 VV--WAGGKLNRVAADGSGSDVIPFRISDTRMVAEAPHPVIDVAPDSFTAKIPRFASVSP 417

Query: 400 SGRSLIFSRKKDGDTGSKLYS--IDLNGRNETLINT--------PAYASDPQWVGFM 446
            GR+++F      ++  KLY   +  +     LI+         PA++ D   + F+
Sbjct: 418 DGRTVVF------ESLGKLYVKPVGSDAAPRRLISGSDDSLELWPAWSRDGDRIAFV 468



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 65/348 (18%), Positives = 118/348 (33%), Gaps = 57/348 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
           DW   G  ++V       RV  +G     + FR+ D    + +             +  H
Sbjct: 351 DWMPDGKSMVVWAGGKLNRVAADGSGSDVIPFRISDT---RMVA------------EAPH 395

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            + D    S T +   F S        V   + K  +  +  D A  R ++ S D +   
Sbjct: 396 PVIDVAPDSFTAKIPRFASVSPDGRTVVFESLGKLYVKPVGSDAAPRRLISGSDDSLELW 455

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +S +  ++A+  + D  + R+  +D R  R  + I   +     P+FS +G   +   
Sbjct: 456 PAWSRDGDRIAFVRWTDAGLGRIVTVDAR-GRNERVITRQQGHYAVPQFSPDGDTIVFEK 514

Query: 277 QKDE---------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +               +YSV         +           +  D  +I   +  EG  Q
Sbjct: 515 RGGGFLTSPTYSENEGVYSVSASGGTPRLVARETST---PQFGADEDRIFMLARAEGNLQ 571

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           L     +G  ++  +Q   A+ F    SP+GD +AF +     + +  M      + + V
Sbjct: 572 LISADLDGEARRVHAQGDLANDF--RVSPRGDYVAFRQ----NYEVFAMPLLPGGQTVTV 625

Query: 388 EDSNLQAPT------------WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +     P             W+ +G +L +S       G  LY    
Sbjct: 626 GEKASSLPVTKVSKGGADYIGWADNGSTLHWS------MGPVLYRAST 667



 Score = 90.8 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 99/328 (30%), Gaps = 58/328 (17%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE----PRFSPNQ 223
               D    +     +         + +    G     L     + + +    P ++P+ 
Sbjct: 185 SWSPDGRYIVAKKHFTTQRSAGTGEIWLYHVSGGGGVQLVKRASEAVQKELGEPIYAPDG 244

Query: 224 QKVAYATY------------DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             + Y                 + I  +   D         +G +   +  P  S +G+ 
Sbjct: 245 NAIYYTRNITPGATFEYAQDSTQGIFNIERYDIDTGEVTTAVGGYGGAVR-PVPSPDGRS 303

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                +  +   ++  DL +     +   L +++  +++      + +   +GK  +   
Sbjct: 304 IAFVRRDKDQSQLWVKDLSTGEERMIYGALDLDLQETWAVYGVYPMMDWMPDGKSMVVW- 362

Query: 332 QSNGSDQKRISQDKEASYFDP--------------------------------VWSPQGD 359
              G    R++ D   S   P                                  SP G 
Sbjct: 363 --AGGKLNRVAADGSGSDVIPFRISDTRMVAEAPHPVIDVAPDSFTAKIPRFASVSPDGR 420

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            + F      K  +  +  D +  RL+   +DS    P WS  G  + F R  D   G +
Sbjct: 421 TVVFESL--GKLYVKPVGSDAAPRRLISGSDDSLELWPAWSRDGDRIAFVRWTDAGLG-R 477

Query: 418 LYSIDLNGRNETLIN-TPAYASDPQWVG 444
           + ++D  GRNE +I     + + PQ+  
Sbjct: 478 IVTVDARGRNERVITRQQGHYAVPQFSP 505



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 102/289 (35%), Gaps = 53/289 (18%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR----------FSPNQQKVAYATYDD 233
           V     ++ L V D      R +  + D  L E            + P+ + +    +  
Sbjct: 307 VRRDKDQSQLWVKDLSTGEERMIYGALDLDLQETWAVYGVYPMMDWMPDGKSM--VVWAG 364

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAP-------------------RFSSNGKRALI 274
             + RV    +  D  P RI + R +  AP                     S +G+  + 
Sbjct: 365 GKLNRVAADGSGSDVIPFRISDTRMVAEAPHPVIDVAPDSFTAKIPRFASVSPDGRTVVF 424

Query: 275 SVQKDEAMDIYSVDLQS-NATERLTNTLFINIS--ASYSPDSSQIVFESDRE-GKEQLYV 330
                    +Y   + S  A  RL +    ++    ++S D  +I F    + G  ++  
Sbjct: 425 ES----LGKLYVKPVGSDAAPRRLISGSDDSLELWPAWSRDGDRIAFVRWTDAGLGRIVT 480

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---------KFAIGVMKKDGS 381
           + + G +++ I++ ++  Y  P +SP GD I F K  G             +  +   G 
Sbjct: 481 VDARGRNERVITR-QQGHYAVPQFSPDGDTIVFEKRGGGFLTSPTYSENEGVYSVSASGG 539

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             RL+  +++   P +      +    + +G    +L S DL+G    +
Sbjct: 540 TPRLVARETST--PQFGADEDRIFMLARAEG--NLQLISADLDGEARRV 584



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 10/119 (8%)

Query: 330 VMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +    G+  + ++ D  E ++ D   SP G  +AF+        I  M   G     + E
Sbjct: 76  ITAPRGATMREVAIDTDEGTWMDVAVSPDGRTLAFSMLGD----IYTMPVSGGTPTRIAE 131

Query: 389 DSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
               +  P +SP G  + F   + G  G  ++ ++ +G N+  +    +   + P W  
Sbjct: 132 GLAWEIQPRFSPDGSRIAFISDRGG--GDNIWLMNTDGSNKQQVTMEDFRLLNQPSWSP 188


>gi|309792445|ref|ZP_07686910.1| WD40 domain-containing protein [Oscillochloris trichoides DG6]
 gi|308225517|gb|EFO79280.1| WD40 domain-containing protein [Oscillochloris trichoides DG6]
          Length = 627

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 55/323 (17%), Positives = 108/323 (33%), Gaps = 45/323 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y  +       +  +  V  S +       + + +  G   R     ++ + F  R S +
Sbjct: 305 YPHLGMPWAAPDPSLPLVYASNIDTGSHWEVYMSNNAGGGTRMTRNPQETVAFSWRHSWD 364

Query: 223 QQKVA-----------YATYDDEDILRVYLMDTRIDRAPKRIGNFRS------------- 258
              +            +    + D+  +Y  D   +   +R+                  
Sbjct: 365 PAMLTLLVDSRRTNAQFRQIYEYDVNAIYSGDFSANAFVRRLTYTDGTQPPPNAPYPGYL 424

Query: 259 -----MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                      +S +G + +    +    +++ +   +N+  +LT    IN S ++SP+ 
Sbjct: 425 PNNTANNYNASYSPDGTKIVFVTDRWGGQELFIMTPTANSPTQLTGQGCINESPTWSPNG 484

Query: 314 SQIVFESDREGKEQLYV----MQSNGS-------DQKRISQDKEASYFDPVWSPQGDLIA 362
             + + S+ +G   +Y         G+              +       P  SP G  +A
Sbjct: 485 RHLYWTSNCDGDFDIYRGEIAYNYEGTWSVDARLVNVVNLTNNNVDDRFPRVSPDGKTVA 544

Query: 363 FTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           F       + I  M         RL   ++   +PTWS  G  L F+  +DGD   ++Y+
Sbjct: 545 FGSNRDGNWEIYTMSSASGDTLRRLTSNNATDDSPTWSADGSKLAFASDRDGDF--EIYT 602

Query: 421 IDLNGRNETLINTP-AYASDPQW 442
           + L+G N T I    A    P W
Sbjct: 603 MTLDGNNTTQITNNSAQDRWPLW 625



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/205 (23%), Positives = 78/205 (38%), Gaps = 15/205 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P+     +   +SP+  K+ + T       +   + T    +P ++     +  +P +S
Sbjct: 424 LPNNTANNYNASYSPDGTKIVFVTDRWGG--QELFIMTPTANSPTQLTGQGCINESPTWS 481

Query: 267 SNGKRALISVQKDEAMDIY------------SVDLQSNATERLTNTLFINISASYSPDSS 314
            NG+    +   D   DIY            SVD +      LTN    +     SPD  
Sbjct: 482 PNGRHLYWTSNCDGDFDIYRGEIAYNYEGTWSVDARLVNVVNLTNNNVDDRFPRVSPDGK 541

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            + F S+R+G  ++Y M S   D  R      A+   P WS  G  +AF       F I 
Sbjct: 542 TVAFGSNRDGNWEIYTMSSASGDTLRRLTSNNATDDSPTWSADGSKLAFASDRDGDFEIY 601

Query: 375 VMKKDGSQERLLVEDS-NLQAPTWS 398
            M  DG+    +  +S   + P W+
Sbjct: 602 TMTLDGNNTTQITNNSAQDRWPLWA 626


>gi|307102700|gb|EFN50969.1| hypothetical protein CHLNCDRAFT_141607 [Chlorella variabilis]
          Length = 357

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 61/316 (19%), Positives = 115/316 (36%), Gaps = 55/316 (17%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +  E    N RI FV     +G    +L  M  DG+++R LTPS   +   P +SP+  
Sbjct: 23  HVHPEATAKNGRIAFV---RATGGRDPALWTMLPDGSDMRQLTPSSGDMEVHPSWSPSGD 79

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALIS-VQKDEAM 282
           +VAY +   + + +++ +        +         +  P FS +G+  +    + D + 
Sbjct: 80  RVAY-SGRHDGVWKIWEVQADGTGLRRLTDGPPGAAIMVPAFSPDGRFIVFEGTEADGST 138

Query: 283 DIYSVD-LQSNATERLT---NTLFI-NISASYSPDSSQIVFESDRE---GKEQLYVMQ-- 332
            ++  D        RLT    +  I ++ A  SPD   + F SDR    G+  +++M+  
Sbjct: 139 TVWRADAADGGNATRLTPADQSPSITDMGAKPSPDGQLLAFASDRGNAPGQYDVWLMEGW 198

Query: 333 ---SNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK--------- 378
               +G   +  R++     +     W+P    +      G    I V            
Sbjct: 199 QQAPDGPGVRLHRLTAGAN-NTLSRSWAPDSRRLVLNSMRGGVGRICVADVPAAEAALDA 257

Query: 379 -----DGSQERLLVEDS-----------------NLQAPTWSPSGRSLIFSRKKDGDTGS 416
                D ++   L   +                     P WSP G  + FS  + G    
Sbjct: 258 LAAPIDAARLLCLTNTTSTPNGPWSPGGMFPTVDGDATPAWSPDGSRIAFSSNRAGSF-- 315

Query: 417 KLYSIDLNGRNETLIN 432
           +++S+  +G +   + 
Sbjct: 316 EIFSMAADGSDVRRLT 331



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 88/219 (40%), Gaps = 18/219 (8%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I   P  +    ++A+          ++ M        +   +   M + P +S +G R
Sbjct: 21  NIHVHPEATAKNGRIAFVRATGGRDPALWTMLPDGSDMRQLTPSSGDMEVHPSWSPSGDR 80

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFE-SDREGKEQL 328
              S + D    I+ V        RLT+       +  ++SPD   IVFE ++ +G   +
Sbjct: 81  VAYSGRHDGVWKIWEVQADGTGLRRLTDGPPGAAIMVPAFSPDGRFIVFEGTEADGSTTV 140

Query: 329 YVMQ-SNGSDQKRISQDKEA---SYFDPVWSPQGDLIAFTKFSG---EKFAIGVMK---- 377
           +    ++G +  R++   ++   +      SP G L+AF    G    ++ + +M+    
Sbjct: 141 WRADAADGGNATRLTPADQSPSITDMGAKPSPDGQLLAFASDRGNAPGQYDVWLMEGWQQ 200

Query: 378 -KDGSQERL--LVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
             DG   RL  L   +N   + +W+P  R L+ +  + G
Sbjct: 201 APDGPGVRLHRLTAGANNTLSRSWAPDSRRLVLNSMRGG 239



 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 54/290 (18%), Positives = 93/290 (32%), Gaps = 51/290 (17%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           +  R++  +  D          GD   R+ +             +  +  DG  +R LT 
Sbjct: 56  SDMRQLTPSSGDMEVHPSWSPSGD---RVAY----SGRHDGVWKIWEVQADGTGLRRLTD 108

Query: 209 SRDQI-LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM----ILAP 263
                 +  P FSP+ + + +   + +    V+  D        R+           +  
Sbjct: 109 GPPGAAIMVPAFSPDGRFIVFEGTEADGSTTVWRADAADGGNATRLTPADQSPSITDMGA 168

Query: 264 RFSSNGKRALISVQKD---EAMDIYSV-------DLQSNATERLTNTLFINISASYSPDS 313
           + S +G+    +  +       D++ +       D       RLT      +S S++PDS
Sbjct: 169 KPSPDGQLLAFASDRGNAPGQYDVWLMEGWQQAPDGPGVRLHRLTAGANNTLSRSWAPDS 228

Query: 314 SQIVFESDREGKEQLYVMQSNGS-----------DQKRI--------SQDKEAS------ 348
            ++V  S R G  ++ V     +           D  R+        + +   S      
Sbjct: 229 RRLVLNSMRGGVGRICVADVPAAEAALDALAAPIDAARLLCLTNTTSTPNGPWSPGGMFP 288

Query: 349 ----YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                  P WSP G  IAF+      F I  M  DGS  R L       A
Sbjct: 289 TVDGDATPAWSPDGSRIAFSSNRAGSFEIFSMAADGSDVRRLTFTPREDA 338



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 67/141 (47%), Gaps = 7/141 (4%)

Query: 303 INISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           I++    +  + +I F     G+   L+ M  +GSD ++++         P WSP GD +
Sbjct: 22  IHVHPEATAKNGRIAFVRATGGRDPALWTMLPDGSDMRQLTPSSGDMEVHPSWSPSGDRV 81

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           A++      + I  ++ DG+  R L +    + +  P +SP GR ++F    + D  + +
Sbjct: 82  AYSGRHDGVWKIWEVQADGTGLRRLTDGPPGAAIMVPAFSPDGRFIVF-EGTEADGSTTV 140

Query: 419 YSID-LNGRNETLINTPAYAS 438
           +  D  +G N T + TPA  S
Sbjct: 141 WRADAADGGNATRL-TPADQS 160



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 14/109 (12%)

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
           +  P  + +   IAF + +G +  A+  M  DGS  R L   S      P+WSPSG  + 
Sbjct: 23  HVHPEATAKNGRIAFVRATGGRDPALWTMLPDGSDMRQLTPSSGDMEVHPSWSPSGDRVA 82

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINT---------PAYASDPQWVGF 445
           +S + DG    K++ +  +G     +           PA++ D +++ F
Sbjct: 83  YSGRHDG--VWKIWEVQADGTGLRRLTDGPPGAAIMVPAFSPDGRFIVF 129



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 56/169 (33%), Gaps = 36/169 (21%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMD-----RDGANIR-YLTPSRDQILFEPRFSPNQQKVA 227
           + ++L  +    +   +  + +M+      DG  +R +   +         ++P+ +++ 
Sbjct: 173 DGQLLAFASDRGNAPGQYDVWLMEGWQQAPDGPGVRLHRLTAGANNTLSRSWAPDSRRLV 232

Query: 228 YATYDDEDILRVYLMD-----------------------TRIDRAPKRIGNFRSM----- 259
             +     + R+ + D                       T     P    +   M     
Sbjct: 233 LNSMR-GGVGRICVADVPAAEAALDALAAPIDAARLLCLTNTTSTPNGPWSPGGMFPTVD 291

Query: 260 -ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
               P +S +G R   S  +  + +I+S+    +   RLT T   + +A
Sbjct: 292 GDATPAWSPDGSRIAFSSNRAGSFEIFSMAADGSDVRRLTFTPREDAAA 340


>gi|116626707|ref|YP_828863.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229869|gb|ABJ88578.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 955

 Score =  135 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 84/211 (39%), Gaps = 24/211 (11%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTL 301
             R      ++     + +   FS +GK+   S  ++   +IY+   +   +  ++T   
Sbjct: 404 GVRGGLEAVQVTTVPGLAIGASFSPDGKQIAFSSNRNGWFEIYTKPSEGPGSDHQVTTDG 463

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              +  ++SPD   I + S    K  L+++ S G    RIS+   A    P WSP G  +
Sbjct: 464 NQAVEPAWSPDGKWIAYHSVA--KHGLWMVPSGGGTPHRISEFGSA----PAWSPDGRTL 517

Query: 362 AFTKFS-----------GEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIF 406
           AF  +              +  I ++  DG+  + L +          P+WSP G+ LIF
Sbjct: 518 AFRSYETSSLALSDWPGDGESTIWIVAADGTNLQQLTQPRNPPGQHADPSWSPDGKRLIF 577

Query: 407 SRKKDGDTGSK--LYSIDLNGRNETLINTPA 435
           +       G +  L+++D+   +   +    
Sbjct: 578 ASLNIVTMGFRGALFTVDVKSGDVKPVPAGG 608



 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 52/319 (16%), Positives = 115/319 (36%), Gaps = 53/319 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + + ++ +                 DGAN   L  ++  +      S + + +A+     
Sbjct: 620 DGKGVYFAGRPNIAGFNGVYYSAFSDGANPVELYRTKQAVPARISLSRDGKSLAFTRMV- 678

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSN 292
            +  +++L DT    +     +       P FS +G R    VQ D+A   ++ ++   +
Sbjct: 679 -NASQIWLTDTSGKESKALYEDLVVRARIPNFSPDGSRLNYQVQSDDATLGVWLMNADGS 737

Query: 293 ATERLTNTLFINISASYS-----------------------PDSSQIV------------ 317
              R+   L     AS++                        D S+ V            
Sbjct: 738 NPTRVAPDLGNTNGASWASNGNALVCSFFGSGKLRFIWISLADGSRRVMEEQTRDMLRSH 797

Query: 318 -------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
                  F  D      ++     G   ++++  ++ ++F P  S  G+ IA+    G++
Sbjct: 798 LTPDEKEFVYDFGSPRNIWKRPVAGGPARQLTFGRQRNWF-PELSWDGNWIAYQVTEGDE 856

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNE 428
             I V+ ++G Q+RLL      +   +++   R + ++  ++G     LY ID + G ++
Sbjct: 857 TQIAVIDRNGGQQRLLTSGPGKRFAHSFASDNRRIAYAGFENGAW--NLYWIDRITGEHK 914

Query: 429 TLIN---TPAYASDPQWVG 444
            + +     ++   P W  
Sbjct: 915 QVTHFTAFGSFVRSPAWRP 933



 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 95/231 (41%), Gaps = 28/231 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SV 276
            FSP+ +++A+++  +     +Y   +    +  ++    +  + P +S +GK     SV
Sbjct: 425 SFSPDGKQIAFSSNRNG-WFEIYTKPSEGPGSDHQVTTDGNQAVEPAWSPDGKWIAYHSV 483

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-----------EGK 325
            K     ++ V        R++       + ++SPD   + F S             +G+
Sbjct: 484 AKHG---LWMVPSGGGTPHRISEFGS---APAWSPDGRTLAFRSYETSSLALSDWPGDGE 537

Query: 326 EQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFS----GEKFAIGVMKKD 379
             ++++ ++G++ ++++Q +     + DP WSP G  + F   +    G + A+  +   
Sbjct: 538 STIWIVAADGTNLQQLTQPRNPPGQHADPSWSPDGKRLIFASLNIVTMGFRGALFTVDVK 597

Query: 380 GSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKD-GDTGSKLYSIDLNGRN 427
               + +       A  P ++  G+ + F+ + +        YS   +G N
Sbjct: 598 SGDVKPVPAGGIWGAANPVFALDGKGVYFAGRPNIAGFNGVYYSAFSDGAN 648



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 19/168 (11%)

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASY 349
                ++T    + I AS+SPD  QI F S+R G  ++Y   S G     +++ D   + 
Sbjct: 408 GLEAVQVTTVPGLAIGASFSPDGKQIAFSSNRNGWFEIYTKPSEGPGSDHQVTTDGNQAV 467

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            +P WSP G  IA+   +  K  + ++   G     + E  +  AP WSP GR+L F   
Sbjct: 468 -EPAWSPDGKWIAYHSVA--KHGLWMVPSGGGTPHRISEFGS--APAWSPDGRTLAFRSY 522

Query: 410 K---------DGDTGSKLYSIDLNGRNETLINT----PAYASDPQWVG 444
           +          GD  S ++ +  +G N   +      P   +DP W  
Sbjct: 523 ETSSLALSDWPGDGESTIWIVAADGTNLQQLTQPRNPPGQHADPSWSP 570



 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 51/278 (18%), Positives = 95/278 (34%), Gaps = 35/278 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +     +G    +   +      EP +SP+ + +AY +     +  V          P 
Sbjct: 444 EIYTKPSEGPGSDHQVTTDGNQAVEPAWSPDGKWIAYHSVAKHGLWMV----PSGGGTPH 499

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERLT-- 298
           RI  F S   AP +S +G+                   D    I+ V       ++LT  
Sbjct: 500 RISEFGS---APAWSPDGRTLAFRSYETSSLALSDWPGDGESTIWIVAADGTNLQQLTQP 556

Query: 299 -NTLFINISASYSPDSSQIVFES----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            N    +   S+SPD  +++F S        +  L+ +     D K +         +PV
Sbjct: 557 RNPPGQHADPSWSPDGKRLIFASLNIVTMGFRGALFTVDVKSGDVKPVPAGGIWGAANPV 616

Query: 354 WSPQGDLIAFTKF---SGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSR 408
           ++  G  + F      +G          DG+    L   + +     + S  G+SL F+R
Sbjct: 617 FALDGKGVYFAGRPNIAGFNGVYYSAFSDGANPVELYRTKQAVPARISLSRDGKSLAFTR 676

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTP--AYASDPQWVG 444
             +    S+++  D +G+    +       A  P +  
Sbjct: 677 MVN---ASQIWLTDTSGKESKALYEDLVVRARIPNFSP 711



 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 101/269 (37%), Gaps = 36/269 (13%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------DDEDIL 237
           K+ L ++   G     ++         P +SP+ + +A+ +Y            D E  +
Sbjct: 485 KHGLWMVPSGGGTPHRISEFGS----APAWSPDGRTLAFRSYETSSLALSDWPGDGESTI 540

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNA 293
            +   D    +   +  N       P +S +GKR + +            +++VD++S  
Sbjct: 541 WIVAADGTNLQQLTQPRNPPGQHADPSWSPDGKRLIFASLNIVTMGFRGALFTVDVKSGD 600

Query: 294 TERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQL-------YVMQSNGSDQKRISQDK 345
            + +         +  ++ D   + F     G+  +       Y   S+G++   + + K
Sbjct: 601 VKPVPAGGIWGAANPVFALDGKGVYFA----GRPNIAGFNGVYYSAFSDGANPVELYRTK 656

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRS 403
           +A       S  G  +AFT+       I +    G + + L ED     + P +SP G  
Sbjct: 657 QAVPARISLSRDGKSLAFTRMVNAS-QIWLTDTSGKESKALYEDLVVRARIPNFSPDGSR 715

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           L +  + D D    ++ ++ +G N T + 
Sbjct: 716 LNYQVQSD-DATLGVWLMNADGSNPTRVA 743



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 100/260 (38%), Gaps = 13/260 (5%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI--LFEPRFSPNQQKVAYATYD---DE 234
           ++ S   G  ++++ ++  DG N++ LT  R+      +P +SP+ +++ +A+ +     
Sbjct: 527 LALSDWPGDGESTIWIVAADGTNLQQLTQPRNPPGQHADPSWSPDGKRLIFASLNIVTMG 586

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQS 291
               ++ +D +                 P F+ +GK    + + +        YS     
Sbjct: 587 FRGALFTVDVKSGDVKPVPAGGIWGAANPVFALDGKGVYFAGRPNIAGFNGVYYSAFSDG 646

Query: 292 NATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                L  T   +    S S D   + F        Q+++  ++G + K + +D      
Sbjct: 647 ANPVELYRTKQAVPARISLSRDGKSLAFTRMVN-ASQIWLTDTSGKESKALYEDLVVRAR 705

Query: 351 DPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSR 408
            P +SP G  + +  +       + +M  DGS   R+  +  N    +W+ +G +L+ S 
Sbjct: 706 IPNFSPDGSRLNYQVQSDDATLGVWLMNADGSNPTRVAPDLGNTNGASWASNGNALVCSF 765

Query: 409 KKDGDTGSKLYSIDLNGRNE 428
              G     ++    +G   
Sbjct: 766 FGSGKLRF-IWISLADGSRR 784



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 93/262 (35%), Gaps = 17/262 (6%)

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            +L   ++V  R+     D  R+ ++   V+     +G    ++  S       ++ D+ 
Sbjct: 694 KALYEDLVVRARIPNFSPDGSRLNYQ---VQSDDATLGVWLMNADGSNPT---RVAPDL- 746

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              T      ++    V     SG ++  + +   DG+       +RD +       P++
Sbjct: 747 -GNTNGASWASNGNALVCSFFGSGKLRF-IWISLADGSRRVMEEQTRDMLRSHLT--PDE 802

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y      +I +  +         +++   R     P  S +G      V + +   
Sbjct: 803 KEFVYDFGSPRNIWKRPV----AGGPARQLTFGRQRNWFPELSWDGNWIAYQVTEGDETQ 858

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           I  +D        LT+      + S++ D+ +I +     G   LY +     + K+++ 
Sbjct: 859 IAVIDRNGGQQRLLTSGPGKRFAHSFASDNRRIAYAGFENGAWNLYWIDRITGEHKQVTH 918

Query: 344 DK--EASYFDPVWSPQGDLIAF 363
                +    P W P  + IA+
Sbjct: 919 FTAFGSFVRSPAWRPGTEQIAY 940



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 30/71 (42%), Gaps = 10/71 (14%)

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG--RNETLINT------P 434
            ++          ++SP G+ + FS  ++G    ++Y+    G   +  +         P
Sbjct: 412 VQVTTVPGLAIGASFSPDGKQIAFSSNRNG--WFEIYTKPSEGPGSDHQVTTDGNQAVEP 469

Query: 435 AYASDPQWVGF 445
           A++ D +W+ +
Sbjct: 470 AWSPDGKWIAY 480



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 40/95 (42%), Gaps = 4/95 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD- 243
           V+   +  + V+DR+G   + L  S     F   F+ + +++AYA +++     +Y +D 
Sbjct: 851 VTEGDETQIAVIDRNGG-QQRLLTSGPGKRFAHSFASDNRRIAYAGFENG-AWNLYWIDR 908

Query: 244 -TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            T   +       F S + +P +    ++      
Sbjct: 909 ITGEHKQVTHFTAFGSFVRSPAWRPGTEQIAYEYS 943


>gi|226226607|ref|YP_002760713.1| hypothetical protein GAU_1201 [Gemmatimonas aurantiaca T-27]
 gi|226089798|dbj|BAH38243.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 997

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 56/245 (22%), Positives = 95/245 (38%), Gaps = 26/245 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATY----DDEDILRVYLMDTRIDRAPKRI------ 253
           +  T S   +   P  S + + + Y  Y      E    +YL +    +   R+      
Sbjct: 310 QKRTGSIANMFVAPALSNDGKFITYIGYGSLLRGEVFPEMYLANAETGKRITRLVKTTTN 369

Query: 254 ---GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASY 309
                 R +   P FS +GK+   + Q+     +Y +D++S    +R+   L   +S S+
Sbjct: 370 PDFEQLRFIYSQPSFSLDGKQLAFTGQRGGRDVLYIMDVKSRNIVKRIDLELDQVLSPSF 429

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG- 368
           SPD  ++VF   R G   LYV+  +     ++ +D+      P WSP G  IAF    G 
Sbjct: 430 SPDGRKVVFSGMRHGSSDLYVVSLDAPGYTQLMKDQYGDLM-PQWSPDGKTIAFISDRGP 488

Query: 369 ---------EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                      + +     +  Q  +L  +      P W+P G+SL +   + G     L
Sbjct: 489 DTDLDILKIGAWKVVTFDLETQQMTILPGQGGRAINPQWAPDGKSLAYVTDRTGIANIFL 548

Query: 419 YSIDL 423
           Y  D 
Sbjct: 549 YDFDA 553



 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 98/263 (37%), Gaps = 15/263 (5%)

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            + ++ +K   S A+   +A  +S+D         G      +F    + +      +  
Sbjct: 304 AEPLLSQKRTGSIANM-FVAPALSNDGKFITYIGYGSLLRGEVFPEMYLANAETGKRITR 362

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           + +   N  +       I  +P FS + +++A+        + +Y+MD +     KRI  
Sbjct: 363 LVKTTTNPDFEQLR--FIYSQPSFSLDGKQLAFTGQRGGRDV-LYIMDVKSRNIVKRIDL 419

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
               +L+P FS +G++ + S  +  + D+Y V L +    +L    + ++   +SPD   
Sbjct: 420 ELDQVLSPSFSPDGRKVVFSGMRHGSSDLYVVSLDAPGYTQLMKDQYGDLMPQWSPDGKT 479

Query: 316 IVFESDRE----------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           I F SDR           G  ++            I   +     +P W+P G  +A+  
Sbjct: 480 IAFISDRGPDTDLDILKIGAWKVVTFDLETQQMT-ILPGQGGRAINPQWAPDGKSLAYVT 538

Query: 366 FSGEKFAIGVMKKDGSQERLLVE 388
                  I +   D  +   L  
Sbjct: 539 DRTGIANIFLYDFDAKEHYQLTN 561



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/220 (23%), Positives = 90/220 (40%), Gaps = 27/220 (12%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALIS-----VQKDEAMDIYSVDLQSNA-TERL---TNTL 301
           KR G+  +M +AP  S++GK          ++ +   ++Y  + ++     RL   T   
Sbjct: 311 KRTGSIANMFVAPALSNDGKFITYIGYGSLLRGEVFPEMYLANAETGKRITRLVKTTTNP 370

Query: 302 ------FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVW 354
                 FI    S+S D  Q+ F   R G++ LY+M     +  KRI  + +     P +
Sbjct: 371 DFEQLRFIYSQPSFSLDGKQLAFTGQRGGRDVLYIMDVKSRNIVKRIDLELDQ-VLSPSF 429

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGD 413
           SP G  + F+        + V+  D      L++D      P WSP G+++ F   +  D
Sbjct: 430 SPDGRKVVFSGMRHGSSDLYVVSLDAPGYTQLMKDQYGDLMPQWSPDGKTIAFISDRGPD 489

Query: 414 TGSKL--------YSIDLNGRNETLINT-PAYASDPQWVG 444
           T   +         + DL  +  T++      A +PQW  
Sbjct: 490 TDLDILKIGAWKVVTFDLETQQMTILPGQGGRAINPQWAP 529



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 77/205 (37%), Gaps = 18/205 (8%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            ++ L +MD    NI          +  P FSP+ +KV ++         +Y++      
Sbjct: 399 GRDVLYIMDVKSRNIVKRIDLELDQVLSPSFSPDGRKVVFSGMRHGSS-DLYVVSLDAPG 457

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKD----------EAMDIYSVDLQSNATERLT 298
             + + +     L P++S +GK       +            A  + + DL++     L 
Sbjct: 458 YTQLMKDQYG-DLMPQWSPDGKTIAFISDRGPDTDLDILKIGAWKVVTFDLETQQMTILP 516

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF------DP 352
                 I+  ++PD   + + +DR G   +++   +  +  +++    A           
Sbjct: 517 GQGGRAINPQWAPDGKSLAYVTDRTGIANIFLYDFDAKEHYQLTNVAGAVTAVAEQSPAI 576

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMK 377
            W+ + D++AF  +     AI  +K
Sbjct: 577 SWAREADIMAFVYYEKTDHAIWKIK 601


>gi|86739661|ref|YP_480061.1| serine/threonine protein kinase [Frankia sp. CcI3]
 gi|86566523|gb|ABD10332.1| serine/threonine protein kinase [Frankia sp. CcI3]
          Length = 734

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 61/261 (23%), Positives = 105/261 (40%), Gaps = 23/261 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           AN + +    DQ +  P  S +++ + Y      + L+    D    +  +      +  
Sbjct: 475 ANDKPIVTGPDQEML-PAISSDRKTIVYFKKGSPNTLQAIAAD-GSGKPVQLFTLGPAAK 532

Query: 261 LA------PRFSSNGKRALISVQKDE----AMDIYSVDLQSNATERLTNTLFINISASYS 310
           L       P  S +G   +I    D+       +Y V L  ++  RL N        ++S
Sbjct: 533 LTIADDARPSLSPDGGFLVIRSTTDQTGTLNPGLYVVKLDGSSVRRL-NAKPQATDPAWS 591

Query: 311 PDSSQIVFESDREGKEQLYVM---QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           PD  +I + S+  G  + +++       +    I+QD+     DPVWSP    IAFT+  
Sbjct: 592 PDGERIAYWSNSTGGNRGFIVVIPTQPDAQPTPITQDQGNGDSDPVWSPDSRKIAFTRAK 651

Query: 368 GEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD--GDTGSKLYSI--- 421
                I  M  DG+  R L     + Q P ++P GR + FS +++       +LY +   
Sbjct: 652 NGDLEIFEMNSDGTDARQLTRVRGDDQDPAYAPDGR-IAFSGQRNPTNPDDRQLYVLNPD 710

Query: 422 DLNGRNETLINTPAYASDPQW 442
           DLN  +  L  T  +    +W
Sbjct: 711 DLNDGDRKLTTTGGFNGHARW 731



 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 88/202 (43%), Gaps = 16/202 (7%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           TI+DD   S++ + G     ++  S +  +G +   L V+  DG+++R L  +      +
Sbjct: 534 TIADDARPSLSPDGGF----LVIRSTTDQTGTLNPGLYVVKLDGSSVRRL--NAKPQATD 587

Query: 217 PRFSPNQQKVAYATYDDEDIL-RVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALI 274
           P +SP+ +++AY +         + ++ T+ D  P  I   +      P +S + ++   
Sbjct: 588 PAWSPDGERIAYWSNSTGGNRGFIVVIPTQPDAQPTPITQDQGNGDSDPVWSPDSRKIAF 647

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----QLYV 330
           +  K+  ++I+ ++       +LT     +   +Y+PD  +I F   R        QLYV
Sbjct: 648 TRAKNGDLEIFEMNSDGTDARQLTRVRGDDQDPAYAPDG-RIAFSGQRNPTNPDDRQLYV 706

Query: 331 MQSN---GSDQKRISQDKEASY 349
           +  +     D+K  +      +
Sbjct: 707 LNPDDLNDGDRKLTTTGGFNGH 728



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 51/144 (35%), Gaps = 13/144 (9%)

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQ----KRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             +V+ S+R G   L+  Q   +      K I    +      + S +  ++ F K S  
Sbjct: 449 DTLVYASNRNGNYDLFTGQVTDNGPLANDKPIVTGPDQEMLPAISSDRKTIVYFKKGSPN 508

Query: 370 KFAIGVMKKDGSQERLLVED-------SNLQAPTWSPSGRSLIF--SRKKDGDTGSKLYS 420
                     G   +L           ++   P+ SP G  L+   +  + G     LY 
Sbjct: 509 TLQAIAADGSGKPVQLFTLGPAAKLTIADDARPSLSPDGGFLVIRSTTDQTGTLNPGLYV 568

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
           + L+G +   +N    A+DP W  
Sbjct: 569 VKLDGSSVRRLNAKPQATDPAWSP 592


>gi|163751698|ref|ZP_02158917.1| hypothetical amidohydrolase [Shewanella benthica KT99]
 gi|161328437|gb|EDP99593.1| hypothetical amidohydrolase [Shewanella benthica KT99]
          Length = 1058

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 80/211 (37%), Gaps = 25/211 (11%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +I       +    S NGK  +     D   DIY + +Q    + L   +   +  +YSP
Sbjct: 27  KIDVSEGTWMNISVSPNGKTIVF----DMLGDIYQIPMQGGEAKVLAKGIAWQMQPTYSP 82

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FT-KF 366
           D   I F SD  G + +++M ++GS+ + ++ +       P WSP    +     +T   
Sbjct: 83  DGKYIAFTSDENGGDNIWIMDADGSNPRAVTDETFRLLNSPAWSPDSQYLVARKHYTGSR 142

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDT 414
           S     + +    G +   L E  N +     P +SP GR + FS+            D+
Sbjct: 143 SLGAGEVWLYHVAGGEGIKLTERPNEEKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDS 202

Query: 415 GSKLYSI----DLNGRNETLINTPAYASDPQ 441
              +Y I       G  E L+     A  P 
Sbjct: 203 VKGIYKIKRYDTETGDIEVLVEGTGGAIRPT 233



 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 99/251 (39%), Gaps = 31/251 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +      +        SPN + + +      DI ++ +         K +    +  + 
Sbjct: 24  EQVKIDVSEGTWMNISVSPNGKTIVF--DMLGDIYQIPMQ----GGEAKVLAKGIAWQMQ 77

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV---- 317
           P +S +GK    +  ++   +I+ +D   +    +T+  F +  S ++SPDS  +V    
Sbjct: 78  PTYSPDGKYIAFTSDENGGDNIWIMDADGSNPRAVTDETFRLLNSPAWSPDSQYLVARKH 137

Query: 318 FESDRE-GKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS------- 367
           +   R  G  ++++    G +  +++   ++E    +P +SP G  I F++ +       
Sbjct: 138 YTGSRSLGAGEVWLYHVAGGEGIKLTERPNEEKDLGEPAYSPDGRYIYFSQDATPGKTFH 197

Query: 368 ------GEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                    + I     +     +LVE       PT SP G  L + ++      S LY 
Sbjct: 198 YSKDSVKGIYKIKRYDTETGDIEVLVEGTGGAIRPTPSPDGTKLAYIKRDG--FQSSLYL 255

Query: 421 IDL-NGRNETL 430
           +DL +G+ E L
Sbjct: 256 LDLKSGKKEKL 266



 Score = 96.2 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 104/296 (35%), Gaps = 42/296 (14%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +  +   +   +   +  +   G   + L         +P +SP+ + +A+ 
Sbjct: 32  EGTWMNISVSPNGKTIVFDMLGDIYQIPMQGGEAKVLAKG-IAWQMQPTYSPDGKYIAFT 90

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           + D+     +++MD               ++ +P +S + +  +     +  +   A ++
Sbjct: 91  S-DENGGDNIWIMDADGSNPRAVTDETFRLLNSPAWSPDSQYLVARKHYTGSRSLGAGEV 149

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDRE-------------GKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 150 WLYHVAGGEGIKLTERPNEEKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVKGIYKI 209

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   D + +  +       P  SP G  +A+ K  G + ++ ++     ++  L  
Sbjct: 210 KRYDTETGDIEVLV-EGTGGAIRPTPSPDGTKLAYIKRDGFQSSLYLLDLKSGKKEKLYG 268

Query: 389 --DSNLQA--------P--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             D ++Q         P  +W+   + ++F        G K+  +D+  ++   I 
Sbjct: 269 KLDRDMQETWAIHGVYPTMSWTADNQEIVFWA------GGKINKLDVESKSVKQIP 318



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 77/401 (19%), Positives = 139/401 (34%), Gaps = 71/401 (17%)

Query: 99  RFQDWNSLGAQVLV-----TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
               W S  +Q LV     TG     G      E  L+ V   + I   +  +      +
Sbjct: 121 NSPAW-SPDSQYLVARKHYTGS-RSLGAG----EVWLYHVAGGEGIKLTERPNEEKDLGE 174

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            A    D  Y   + +     +       S  S      +   D +  +I  L       
Sbjct: 175 PA-YSPDGRYIYFSQDATPGKT----FHYSKDSVKGIYKIKRYDTETGDIEVLVEGTGGA 229

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR----------SMILAP 263
           +  P  SP+  K+AY   D      +YL+D +  +  K  G              +    
Sbjct: 230 I-RPTPSPDGTKLAYIKRD-GFQSSLYLLDLKSGKKEKLYGKLDRDMQETWAIHGVYPTM 287

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER--------LTNTLFINIS--------- 306
            ++++ +  +          I  +D++S + ++        LT    +            
Sbjct: 288 SWTADNQEIVFWA----GGKINKLDVESKSVKQIPFSVKTELTVQPAVRFEQDLDKDVFD 343

Query: 307 ------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGD 359
                 A  SPD +++V+E+   GK  +  + +      R++  D +     P WS    
Sbjct: 344 VKMLRMAQVSPDGNKVVYEA--LGKLWVKSLSNKSDKHSRLTNLDADLRELYPQWSRDSR 401

Query: 360 LIAFTKFSG-EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            I FT +   ++  + V++    + + L  E      PT+SP G  +++ + K G    K
Sbjct: 402 SIVFTTWDDQDQGTVKVIRVRNKRIKTLTKEPGKYVEPTFSPDGSFVVYRKTKGGYITPK 461

Query: 418 -------LYSIDLNGRNETLIN----TPAYASDPQWVGFMD 447
                  LY +D+ G+  T I      P + +D Q V FMD
Sbjct: 462 TWSQDTGLYKVDIKGKQNTRITPDGYQPQFGADSQRVYFMD 502



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 77/202 (38%), Gaps = 21/202 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQ 277
           SP+  KV Y        L V  +  + D+   R+ N  +    L P++S + +  + +  
Sbjct: 353 SPDGNKVVYEALGK---LWVKSLSNKSDKHS-RLTNLDADLRELYPQWSRDSRSIVFTTW 408

Query: 278 KD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQ 327
            D +   +  + +++   + LT      +  ++SPD S +V+   + G            
Sbjct: 409 DDQDQGTVKVIRVRNKRIKTLTKEPGKYVEPTFSPDGSFVVYRKTKGGYITPKTWSQDTG 468

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           LY +   G    RI+ D     + P +      + F    GE      +  DG Q+R+  
Sbjct: 469 LYKVDIKGKQNTRITPDG----YQPQFGADSQRVYFMDQ-GETPEFASINLDGFQKRVHY 523

Query: 388 EDSNLQAPTWSPSGRSLIFSRK 409
                     SP G+ L F+ +
Sbjct: 524 TSKLGTEFRISPDGKQLAFAER 545



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 10/129 (7%)

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD+E K Q+    +   +Q +I    E ++ +   SP G  I F         I  +  
Sbjct: 6   TSDKEPKWQVNAPANAPFEQVKI-DVSEGTWMNISVSPNGKTIVFDMLGD----IYQIPM 60

Query: 379 DGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY- 436
            G + ++L +    Q  PT+SP G+ + F+  ++G  G  ++ +D +G N   +    + 
Sbjct: 61  QGGEAKVLAKGIAWQMQPTYSPDGKYIAFTSDENG--GDNIWIMDADGSNPRAVTDETFR 118

Query: 437 -ASDPQWVG 444
             + P W  
Sbjct: 119 LLNSPAWSP 127


>gi|332662868|ref|YP_004445656.1| amidohydrolase [Haliscomenobacter hydrossis DSM 1100]
 gi|332331682|gb|AEE48783.1| amidohydrolase [Haliscomenobacter hydrossis DSM 1100]
          Length = 1078

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 80/209 (38%), Gaps = 25/209 (11%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                  +    S +GK  +  +  D    IY++  Q      L       +   YSPD 
Sbjct: 34  STTEGTWMNLDVSPDGKDIVFDLLGD----IYAISAQGGEARLLRGGHAFEVQPKYSPDG 89

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFSG- 368
            +I+F SD  G +  +VM  +G + ++I+++      + +W+P G+ I     FT     
Sbjct: 90  QKILFTSDAGGGDNAWVMDRDGKNARQITKEDFRLVNNSIWTPDGEYIITRKHFTSQRSL 149

Query: 369 EKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRK--------KDGDTGS 416
               + +    G +   L     +  +L  P  SP GR + +S           + D  +
Sbjct: 150 GAGELWMYHLSGGKGIQLTSRKNDQQDLNEPNISPDGRYVYYSEDMSAGGIFQYNKDPNN 209

Query: 417 KLYSI----DLNGRNETLINTPAYASDPQ 441
           +++ I       G+ ET+      A  PQ
Sbjct: 210 QIFVIKQFDRETGKIETITGGAGGAVRPQ 238



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 91/231 (39%), Gaps = 30/231 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + + +      D+L      +      + +    +  + P++S +G++ L +    
Sbjct: 46  SPDGKDIVF------DLLGDIYAISAQGGEARLLRGGHAFEVQPKYSPDGQKILFTSDAG 99

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIV----FESDRE-GKEQLYVMQS 333
              + + +D       ++T   F  ++ S ++PD   I+    F S R  G  +L++   
Sbjct: 100 GGDNAWVMDRDGKNARQITKEDFRLVNNSIWTPDGEYIITRKHFTSQRSLGAGELWMYHL 159

Query: 334 NGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTK--FSGEKF--------AIGVMKK--- 378
           +G    +++  K       +P  SP G  + +++   +G  F         I V+K+   
Sbjct: 160 SGGKGIQLTSRKNDQQDLNEPNISPDGRYVYYSEDMSAGGIFQYNKDPNNQIFVIKQFDR 219

Query: 379 -DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             G  E +         P  S +G+ L F R+    T S LY  +L    E
Sbjct: 220 ETGKIETITGGAGGAVRPQVSRNGKLLAFVRRV--RTQSVLYIRNLETARE 268



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 80/197 (40%), Gaps = 20/197 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN++ + +      + +         +  P+R+         P FS +GK  L     D
Sbjct: 359 APNEKYIVF------NAVGYLWKKDLPNGTPQRLTKSTDFEFEPTFSPDGKSLLYVTHND 412

Query: 280 EAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---------KEQLY 329
            A   +  + L + A   ++       + +YSPD   IVF+ D            K  +Y
Sbjct: 413 SASGTLRRIQLDNTAASPVSTEPANYRTPAYSPDGQLIVFKKDGSSAAMGPANTAKPGIY 472

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +++ +G     I+        +P ++ +GD I +T   G   ++G  K DG+ ER+ +  
Sbjct: 473 LLKVSGGPATFITAQGN----NPRFNAKGDRIYYTLGGGMNMSMGSCKLDGTDERIHLRS 528

Query: 390 SNLQAPTWSPSGRSLIF 406
           +     T SP  + + F
Sbjct: 529 TYGSQFTVSPDEKWVAF 545



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 51/370 (13%), Positives = 113/370 (30%), Gaps = 77/370 (20%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           ++D+     I         A   +  H    ++    + +      +ILF S++      
Sbjct: 53  VFDLLG--DIYAISAQGGEARLLRGGHAF--EVQPKYSPDG----QKILFTSDAGGGDNA 104

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATYDDEDILRVYLMDTR 245
                VMDRDG N R +T    +++    ++P+ + +     + +        +++    
Sbjct: 105 ----WVMDRDGKNARQITKEDFRLVNNSIWTPDGEYIITRKHFTSQRSLGAGELWMYHLS 160

Query: 246 IDRAPKRIG--NFRSMILAPRFSSNGKRALIS----------VQKDEAMDIYSV---DLQ 290
             +  +     N +  +  P  S +G+    S            KD    I+ +   D +
Sbjct: 161 GGKGIQLTSRKNDQQDLNEPNISPDGRYVYYSEDMSAGGIFQYNKDPNNQIFVIKQFDRE 220

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG----------SDQKR 340
           +   E +T      +    S +   + F      +  LY+               S  ++
Sbjct: 221 TGKIETITGGAGGAVRPQVSRNGKLLAFVRRVRTQSVLYIRNLETAREWPVYNQLSKDQQ 280

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL------VEDSNLQA 394
            +      Y    W+P    I           I  +  +G  + +       V      A
Sbjct: 281 EAWTIFGCYPGYAWTPDDQSIVIWANG----KINKVDVNGFNKSVEIPFTCQVNQRVYDA 336

Query: 395 PTW-------------------SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTP 434
             +                   +P+ + ++F      +    L+  DL NG  + L  + 
Sbjct: 337 VRFKQALNPATFDAKVIRHVATAPNEKYIVF------NAVGYLWKKDLPNGTPQRLTKST 390

Query: 435 AYASDPQWVG 444
            +  +P +  
Sbjct: 391 DFEFEPTFSP 400



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 60/327 (18%), Positives = 107/327 (32%), Gaps = 61/327 (18%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD--QILFEPRFSPNQQ 224
           T +     +R  F S+  +       L +    G     LT  ++  Q L EP  SP+ +
Sbjct: 131 TPDGEYIITRKHFTSQRSLGAG---ELWMYHLSGGKGIQLTSRKNDQQDLNEPNISPDGR 187

Query: 225 KVAYATYDDEDILRVYLMD-----------TRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            V Y+       +  Y  D            R     + I       + P+ S NGK   
Sbjct: 188 YVYYSEDMSAGGIFQYNKDPNNQIFVIKQFDRETGKIETITGGAGGAVRPQVSRNGKLLA 247

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---------A--SYSPDSSQIVFESDR 322
              +      +Y  +L++     + N L  +              +++PD   IV  +  
Sbjct: 248 FVRRVRTQSVLYIRNLETAREWPVYNQLSKDQQEAWTIFGCYPGYAWTPDDQSIVIWA-- 305

Query: 323 EGKEQLYVMQSNG-----------------SDQKRISQDKEASYFDP------VWSPQGD 359
               ++  +  NG                  D  R  Q    + FD         +P   
Sbjct: 306 --NGKINKVDVNGFNKSVEIPFTCQVNQRVYDAVRFKQALNPATFDAKVIRHVATAPNEK 363

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKL 418
            I F         +          + L + ++ +  PT+SP G+SL++    D  +G+ L
Sbjct: 364 YIVFNAVG----YLWKKDLPNGTPQRLTKSTDFEFEPTFSPDGKSLLYVTHNDSASGT-L 418

Query: 419 YSIDLNGRNETLINT-PAYASDPQWVG 444
             I L+    + ++T PA    P +  
Sbjct: 419 RRIQLDNTAASPVSTEPANYRTPAYSP 445



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 7/104 (6%)

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V    G+ ++      E ++ +   SP G  I F         I  +   G + RLL   
Sbjct: 21  VNNPPGTFKEVAFSTTEGTWMNLDVSPDGKDIVFDLLGD----IYAISAQGGEARLLRGG 76

Query: 390 SNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              +  P +SP G+ ++F+    G   +  + +D +G+N   I 
Sbjct: 77  HAFEVQPKYSPDGQKILFTSDAGGGDNA--WVMDRDGKNARQIT 118



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 86/275 (31%), Gaps = 51/275 (18%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDIL---------RVYLMDTRIDRAPKRIGNF 256
                      P+ S N + +A+        +         R + +  ++ +  +     
Sbjct: 226 TITGGAGGAVRPQVSRNGKLLAFVRRVRTQSVLYIRNLETAREWPVYNQLSKDQQEAWTI 285

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS---NATERLT---NTLFINI----- 305
                   ++ + +  +I         I  VD+     +     T   N    +      
Sbjct: 286 FGCYPGYAWTPDDQSIVIWA----NGKINKVDVNGFNKSVEIPFTCQVNQRVYDAVRFKQ 341

Query: 306 ---SASYS----------PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               A++           P+   IVF +       L+         +R+++  +   F+P
Sbjct: 342 ALNPATFDAKVIRHVATAPNEKYIVFNA----VGYLWKKDLPNGTPQRLTKSTD-FEFEP 396

Query: 353 VWSPQGDLIAF-TKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF---- 406
            +SP G  + + T        +  ++ D  +   +  E +N + P +SP G+ ++F    
Sbjct: 397 TFSPDGKSLLYVTHNDSASGTLRRIQLDNTAASPVSTEPANYRTPAYSPDGQLIVFKKDG 456

Query: 407 SRKKDGDTG---SKLYSIDLNGRNETLINTPAYAS 438
           S    G        +Y + ++G   T I       
Sbjct: 457 SSAAMGPANTAKPGIYLLKVSGGPATFITAQGNNP 491



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 66/230 (28%), Gaps = 64/230 (27%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +SP+ Q +                                      F  +G  A +  
Sbjct: 441 PAYSPDGQLIV-------------------------------------FKKDGSSAAMGP 463

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                  IY + +       +T       +  ++    +I +         +   + +G+
Sbjct: 464 ANTAKPGIYLLKVSGGPATFIT---AQGNNPRFNAKGDRIYYTLGGGMNMSMGSCKLDGT 520

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           D++   +    S F    SP    +AF     +   + +     S   L +       P 
Sbjct: 521 DERIHLRSTYGSQF--TVSPDEKWVAFV----DLHKVYIAAFPHSGTTLNLGSGGTDFPV 574

Query: 397 ------------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                       WS S + L ++       G++ +SI L  R E + N P
Sbjct: 575 KQVAKDAGINLHWSASSKILHYT------LGNQYFSIPLEDRFEFIANKP 618


>gi|163788836|ref|ZP_02183281.1| peptidase S41 [Flavobacteriales bacterium ALC-1]
 gi|159876073|gb|EDP70132.1| peptidase S41 [Flavobacteriales bacterium ALC-1]
          Length = 1090

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 15/187 (8%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESD 321
           P  S  GKRA+     +   +I++V  ++   + +TN+  + + S  +SP   +I + SD
Sbjct: 307 PNLSPKGKRAIF----EHRGEIFTVPKENGTWKNITNSPGVADRSPIWSPKGDKIAWFSD 362

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           + G+ QL +   +G + + I       YF P WSP G  IA++      + + ++  +  
Sbjct: 363 KGGEYQLMLADQDGQNAEAIKLPNPTFYFQPDWSPDGKYIAYS---DTHYNVWILNLETK 419

Query: 382 QERLLVEDS-----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-A 435
           + R +  D          P WSP  + + F +++D    S +++ +++ +    +  P A
Sbjct: 420 KTRKVATDRYAHPNRTMNPVWSPDSKWIAFPKQQDSHFKS-IFAYNVDSKKTIQLTDPIA 478

Query: 436 YASDPQW 442
            A  P W
Sbjct: 479 DAITPVW 485



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 76/203 (37%), Gaps = 25/203 (12%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                R+ +      +P FS++GK    + Q D  +D++ +  +    +RLT     +  
Sbjct: 49  GGTAIRLTSDDGYESSPHFSNDGKMIAFTAQYDGNVDVFVMPSEGGEPKRLTYHPGGDFV 108

Query: 307 ASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             ++PD + ++F S RE +     + + + + G   K +   + A       S  G  IA
Sbjct: 109 QGWTPDGN-VLFRSGREAQPTMTNKFFTVSTKGGLPKALDIPRAAY---GELSSDGKHIA 164

Query: 363 FT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRK 409
           +T              G+   I V+           + +  +   P W   G  + F  +
Sbjct: 165 YTPITGWDAEWRNYRGGQAMPIWVVDMKTKDLVRTSQPTGERHLDPVWL-DGN-VYFMSE 222

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           +  D    ++S + + + E  I 
Sbjct: 223 R--DYTMNIWSFNPSTKEEKQIT 243



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 55/347 (15%), Positives = 126/347 (36%), Gaps = 58/347 (16%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS-- 192
            +  +  K F  S       A  I    Y  ++ +       I +   +      +N   
Sbjct: 125 AQPTMTNKFFTVSTKGGLPKALDIPRAAYGELSSDG----KHIAYTPITGWDAEWRNYRG 180

Query: 193 -----LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V+D    ++   +    +   +P +  +     Y   + +  + ++  +    
Sbjct: 181 GQAMPIWVVDMKTKDLVRTSQPTGERHLDPVW-LDGN--VYFMSERDYTMNIWSFNPST- 236

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--------- 298
           +  K+I   +   +    S +  +  I  ++   + +YS    S  T++L          
Sbjct: 237 KEEKQITFHKKFDVK---SLDASKNKIVYEQGGYLHVYS--PSSGNTKQLNIDVKADLNF 291

Query: 299 -NTLFINIS------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               + N+S       + SP   + +F    E + +++ +       K I+     +   
Sbjct: 292 YRAKWDNVSAFQLSNPNLSPKGKRAIF----EHRGEIFTVPKENGTWKNITNSPGVADRS 347

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           P+WSP+GD IA+    G ++ + +  +DG  ++   L   +    P WSP G+ + +S  
Sbjct: 348 PIWSPKGDKIAWFSDKGGEYQLMLADQDGQNAEAIKLPNPTFYFQPDWSPDGKYIAYS-- 405

Query: 410 KDGDTGSKLYSIDLNGRNETLINT-----------PAYASDPQWVGF 445
              DT   ++ ++L  +    + T           P ++ D +W+ F
Sbjct: 406 ---DTHYNVWILNLETKKTRKVATDRYAHPNRTMNPVWSPDSKWIAF 449



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 67/197 (34%), Gaps = 26/197 (13%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   +     D    ++   +      RLT+      S  +S D   I F +  +G   +
Sbjct: 31  GDNVVFVYAND----LWKASVNGGTAIRLTSDDGYESSPHFSNDGKMIAFTAQYDGNVDV 86

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----AIGVMKKDGSQER 384
           +VM S G + KR++       F   W+P G+ + F      +         +   G   +
Sbjct: 87  FVMPSEGGEPKRLTY-HPGGDFVQGWTPDGN-VLFRSGREAQPTMTNKFFTVSTKGGLPK 144

Query: 385 LLVEDSNLQAPTWSPSGRSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPA 435
            L +         S  G+ + ++         R   G     ++ +D+  ++    + P 
Sbjct: 145 AL-DIPRAAYGELSSDGKHIAYTPITGWDAEWRNYRGGQAMPIWVVDMKTKDLVRTSQPT 203

Query: 436 YAS--DPQW----VGFM 446
                DP W    V FM
Sbjct: 204 GERHLDPVWLDGNVYFM 220



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 54/312 (17%), Positives = 107/312 (34%), Gaps = 51/312 (16%)

Query: 168 GEKGDF------NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
              GDF      +  +LF S       + N    +   G   + L   R         S 
Sbjct: 102 HPGGDFVQGWTPDGNVLFRSGREAQPTMTNKFFTVSTKGGLPKALDIPRAAYGEL---SS 158

Query: 222 NQQKVAYA----------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           + + +AY            Y     + ++++D +     +         L P +  +G  
Sbjct: 159 DGKHIAYTPITGWDAEWRNYRGGQAMPIWVVDMKTKDLVRTSQPTGERHLDPVW-LDGN- 216

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                ++D  M+I+S +  +   +++T     ++  S     ++IV+    E    L+V 
Sbjct: 217 VYFMSERDYTMNIWSFNPSTKEEKQITFHKKFDVK-SLDASKNKIVY----EQGGYLHVY 271

Query: 332 QSNGSDQKRISQDKEASYF---------------DPVWSPQGDLIAFTKFSGEKFAIGVM 376
             +  + K+++ D +A                  +P  SP+G    F         I  +
Sbjct: 272 SPSSGNTKQLNIDVKADLNFYRAKWDNVSAFQLSNPNLSPKGKRAIFEHRG----EIFTV 327

Query: 377 KKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI--N 432
            K+    + +        ++P WSP G  + +   K G+   +L   D +G+N   I   
Sbjct: 328 PKENGTWKNITNSPGVADRSPIWSPKGDKIAWFSDKGGE--YQLMLADQDGQNAEAIKLP 385

Query: 433 TPAYASDPQWVG 444
            P +   P W  
Sbjct: 386 NPTFYFQPDWSP 397



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 66/168 (39%), Gaps = 9/168 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                +  L + D+DG N   +        F+P +SP+ + +AY+         V++++ 
Sbjct: 361 SDKGGEYQLMLADQDGQNAEAIKLPNPTFYFQPDWSPDGKYIAYSDTH----YNVWILNL 416

Query: 245 RIDRAPKRIGN---FRSMILAPRFSSNGKRALISVQKDEAMD-IYSVDLQSNATERLTNT 300
              +  K   +     +  + P +S + K      Q+D     I++ ++ S  T +LT+ 
Sbjct: 417 ETKKTRKVATDRYAHPNRTMNPVWSPDSKWIAFPKQQDSHFKSIFAYNVDSKKTIQLTDP 476

Query: 301 LFINISASYSPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +   I+  +      +    S   G +  ++  SN      +++   A
Sbjct: 477 IADAITPVWDASGKYLYTLASTNYGLQSGWLDMSNYDPAANLTRSLYA 524



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 70/211 (33%), Gaps = 21/211 (9%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N L     +G     LT S D     P FS + + +A+    D + + V++M +     P
Sbjct: 40  NDLWKASVNGGTAIRLT-SDDGYESSPHFSNDGKMIAFTAQYDGN-VDVFVMPSE-GGEP 96

Query: 251 KRIGNFRSMILAPRFSSNGKRALIS---VQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           KR+           ++ +G     S    Q       ++V  +    + L          
Sbjct: 97  KRLTYHPGGDFVQGWTPDGNVLFRSGREAQPTMTNKFFTVSTKGGLPKALDIPRAAYGE- 155

Query: 308 SYSPDSSQIVFE----------SDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             S D   I +           + R G+   ++V+     D  R SQ     + DPVW  
Sbjct: 156 -LSSDGKHIAYTPITGWDAEWRNYRGGQAMPIWVVDMKTKDLVRTSQPTGERHLDPVWL- 213

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            G+ + F         I        +E+ + 
Sbjct: 214 DGN-VYFMSERDYTMNIWSFNPSTKEEKQIT 243


>gi|300789887|ref|YP_003770178.1| hypothetical protein AMED_8073 [Amycolatopsis mediterranei U32]
 gi|299799401|gb|ADJ49776.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
          Length = 922

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 84/195 (43%), Gaps = 9/195 (4%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D + D     +       L+   S +G+   +    D    I+ +        RLT+ L 
Sbjct: 23  DLQPDGGRAGVVLREGTNLSAALSPDGRWIAV----DLVTGIWVLPAGGGRARRLTDDLQ 78

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                ++SPD  ++VF+S R+G   LYV+ + G   +++++ +   + +PV+SP G  +A
Sbjct: 79  DATLPTWSPDGRRLVFQSYRDGNFHLYVIDAAGGTPRKLTEGRF-DHREPVFSPDGTKLA 137

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           F+      + I ++         +V   + + +P WS  G  ++F+     DT   + ++
Sbjct: 138 FSSDRDGSYGIHLLDLASGAISTVVSTPDEEASPRWSADGTKIVFTVN---DTAIDVVTL 194

Query: 422 DLNGRNETLINTPAY 436
               R   +  T A 
Sbjct: 195 ATGARTRLVTATGAD 209



 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 84/211 (39%), Gaps = 17/211 (8%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +  DG     +   R+        SP+ + +A       D++    +        +R+ +
Sbjct: 24  LQPDGGRAGVVL--REGTNLSAALSPDGRWIAV------DLVTGIWVLPAGGGRARRLTD 75

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                  P +S +G+R +    +D    +Y +D       +LT   F +    +SPD ++
Sbjct: 76  DLQDATLPTWSPDGRRLVFQSYRDGNFHLYVIDAAGGTPRKLTEGRFDHREPVFSPDGTK 135

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           + F SDR+G   ++++         +  + D+EAS   P WS  G  I FT        +
Sbjct: 136 LAFSSDRDGSYGIHLLDLASGAISTVVSTPDEEAS---PRWSADGTKIVFTVNDTAIDVV 192

Query: 374 GVMKKDGSQERLLVEDSNLQ--APTWSPSGR 402
            +    G++ RL+      +   P + P G+
Sbjct: 193 TL--ATGARTRLVTATGADKLYGPAFGPGGQ 221



 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 94/270 (34%), Gaps = 36/270 (13%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +        V D D    + +     + +  P  S + +++A+        L    + 
Sbjct: 285 VSTAPRDYRRRVRDLDSPAPKPV-----RGIASPVVSRDGKRIAF------RALNAIYVV 333

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                 P+R+         P F  +G + L +  +    D++  DL +     LT     
Sbjct: 334 AAGGGRPQRLIGDGYFNSDPDFHPDGTKLLYTSDRLGTADLWLHDLGTGTDTVLTQLAGA 393

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            ++  +SPD  ++ +  D++G    ++     +  ++++         P WSP G ++A 
Sbjct: 394 QVAPRWSPDGGRVAYA-DQDGAT--WIHDVASNSAQQVTPPLFMP-GRPTWSPDGSVLAL 449

Query: 364 T-------KFSGEKFAIGVMKKDGSQERLL-------VEDSNLQAPTWSPSGRSLIFSRK 409
                   ++      I  +     + R                 P WSP GR L F+  
Sbjct: 450 AAVKPYSKRYREGTSQILTVDLKTHELRYAEPMPFRSFATRGDDGPLWSPDGRYLAFTV- 508

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASD 439
              ++ + +  +D  GR   LI  P   + 
Sbjct: 509 ---ESVAWIAPVDGTGR---LIGAPRQVTH 532



 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 7/144 (4%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             N+SA+ SPD   I      +    ++V+ + G   +R++ D +     P WSP G  +
Sbjct: 38  GTNLSAALSPDGRWIA----VDLVTGIWVLPAGGGRARRLTDDLQ-DATLPTWSPDGRRL 92

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            F  +    F + V+   G   R L E   + + P +SP G  L FS  +DG  G  L  
Sbjct: 93  VFQSYRDGNFHLYVIDAAGGTPRKLTEGRFDHREPVFSPDGTKLAFSSDRDGSYGIHLLD 152

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
           +  +G   T+++TP   + P+W  
Sbjct: 153 L-ASGAISTVVSTPDEEASPRWSA 175



 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 58/323 (17%), Positives = 101/323 (31%), Gaps = 80/323 (24%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQ------------------------------ 224
           V    GA  R +T +    L+ P F P  Q                              
Sbjct: 192 VTLATGARTRLVTATGADKLYGPAFGPGGQPSYLRLRGAEADLMLGDEQLTKGEDVFGFA 251

Query: 225 ------KVAYATYDD----------EDILRVYLMDTRIDRAPKRIGNFRS-------MIL 261
                  V Y               +DI     + T      +R+ +  S        I 
Sbjct: 252 ANWSGSAVLYTADGHIRWREQSGAVKDIPFEAGVSTAPRDYRRRVRDLDSPAPKPVRGIA 311

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +P  S +GKR            IY V       +RL    + N    + PD +++++ SD
Sbjct: 312 SPVVSRDGKRIAFRA----LNAIYVVAAGGGRPQRLIGDGYFNSDPDFHPDGTKLLYTSD 367

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R G   L++          ++Q    +   P WSP G  +A+    G      +     +
Sbjct: 368 RLGTADLWLHDLGTGTDTVLTQLA-GAQVAPRWSPDGGRVAYADQDGAT---WIHDVASN 423

Query: 382 QERLLVEDSNLQA-PTWSPSGRSLIFS-----RKKDGDTGSKLYSIDLNGRNETLI---- 431
             + +     +   PTWSP G  L  +      K+  +  S++ ++DL            
Sbjct: 424 SAQQVTPPLFMPGRPTWSPDGSVLALAAVKPYSKRYREGTSQILTVDLKTHELRYAEPMP 483

Query: 432 ---------NTPAYASDPQWVGF 445
                    + P ++ D +++ F
Sbjct: 484 FRSFATRGDDGPLWSPDGRYLAF 506



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 97/309 (31%), Gaps = 59/309 (19%)

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY--------------QSITGE 169
            R   R  D    K + G          ++IA    + IY                    
Sbjct: 292 YRRRVRDLDSPAPKPVRGIASPVVSRDGKRIAFRALNAIYVVAAGGGRPQRLIGDGYFNS 351

Query: 170 KGDFN---SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
             DF+   +++L+ S+ + +      L + D  G     +          PR+SP+  +V
Sbjct: 352 DPDFHPDGTKLLYTSDRLGTA----DLWLHDL-GTGTDTVLTQLAGAQVAPRWSPDGGRV 406

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-------QKD 279
           AYA  D         +      + +++     M   P +S +G    ++         ++
Sbjct: 407 AYADQDG-----ATWIHDVASNSAQQVTPPLFMPGRPTWSPDGSVLALAAVKPYSKRYRE 461

Query: 280 EAMDIYSVDLQSNATE-------RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               I +VDL+++          R   T   +    +SPD   + F  +       ++  
Sbjct: 462 GTSQILTVDLKTHELRYAEPMPFRSFATRG-DDGPLWSPDGRYLAFTVE----SVAWIAP 516

Query: 333 SNG-----SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            +G        ++++ D   S          D + +      K  +   K  G + R + 
Sbjct: 517 VDGTGRLIGAPRQVTHDVTDSLAWQ----GNDTLVYLS----KGRLKAQKIAGGEPRTIR 568

Query: 388 EDSNLQAPT 396
            D     P 
Sbjct: 569 LDFTWARPR 577



 Score = 36.9 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 24/68 (35%), Gaps = 7/68 (10%)

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AY 436
            DG +  +++ +    +   SP GR +        D  + ++ +   G     +      
Sbjct: 26  PDGGRAGVVLREGTNLSAALSPDGRWIAV------DLVTGIWVLPAGGGRARRLTDDLQD 79

Query: 437 ASDPQWVG 444
           A+ P W  
Sbjct: 80  ATLPTWSP 87


>gi|308047731|ref|YP_003911297.1| amidohydrolase [Ferrimonas balearica DSM 9799]
 gi|307629921|gb|ADN74223.1| amidohydrolase [Ferrimonas balearica DSM 9799]
          Length = 1064

 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 89/231 (38%), Gaps = 27/231 (11%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           DD+    V      ++     +     M L    S +GK  +  +  D    IY++ +  
Sbjct: 26  DDKPTWDVNAPQGPMETIQINVSQGTWMNL--DISPDGKTLVFDLLGD----IYTMPIGG 79

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                L   +  ++   +SPD ++I F SD++G + ++ ++ +GSD + ++++       
Sbjct: 80  GDATPLVKGIAWHMQPRFSPDGTRIAFTSDQDGGDNIWTVKLDGSDMQPVTKETFRLLNS 139

Query: 352 PVWSPQGDLIA----FTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGR 402
           P WSP G  +     +T         + +    G +   L E  N Q     P +SP GR
Sbjct: 140 PAWSPDGQYLVGRKHYTAQRSLGAGEVWMYHISGGKGIQLTERPNDQKDLGEPAFSPDGR 199

Query: 403 SLIFSRK--------KDGDTGSKLYSI----DLNGRNETLINTPAYASDPQ 441
            + FS+            D+   +Y I       G  E L+     A  P 
Sbjct: 200 YIYFSQDATPGKTFHYSKDSVKGIYKIQRYDRQTGEIEVLLEGSGGAIRPT 250



 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 30/235 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+ + + +      DI  + +         K I       + PRFS +G R   +  +
Sbjct: 57  ISPDGKTLVF--DLLGDIYTMPIGGGDATPLVKGIAWH----MQPRFSPDGTRIAFTSDQ 110

Query: 279 DEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVMQ 332
           D   +I++V L  +  + +T   F +  S ++SPD   +V    + + R  G  ++++  
Sbjct: 111 DGGDNIWTVKLDGSDMQPVTKETFRLLNSPAWSPDGQYLVGRKHYTAQRSLGAGEVWMYH 170

Query: 333 SNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVMK 377
            +G    ++++         +P +SP G  I F++ +                + I    
Sbjct: 171 ISGGKGIQLTERPNDQKDLGEPAFSPDGRYIYFSQDATPGKTFHYSKDSVKGIYKIQRYD 230

Query: 378 KDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +   +  +L+E       PT SP GR L +  +      S LY  DL   ++  +
Sbjct: 231 RQTGEIEVLLEGSGGAIRPTPSPDGRQLAYIARDG--FQSALYLYDLESGDKRQV 283



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 85/248 (34%), Gaps = 36/248 (14%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  M   G +   L         +PRFSP+  ++A+ +  D       +     D  P 
Sbjct: 71  DIYTMPIGGGDATPLVKG-IAWHMQPRFSPDGTRIAFTSDQDGGDNIWTVKLDGSDMQPV 129

Query: 252 RIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDIYSVDLQSNATERLTNTLFIN-- 304
               FR +  +P +S +G+  +     + Q+   A +++   +      +LT        
Sbjct: 130 TKETFRLLN-SPAWSPDGQYLVGRKHYTAQRSLGAGEVWMYHISGGKGIQLTERPNDQKD 188

Query: 305 -ISASYSPDSSQIVFESDRE-------------GKEQLYVMQSNGSDQKRISQDKEASYF 350
               ++SPD   I F  D               G  ++        + + +  +      
Sbjct: 189 LGEPAFSPDGRYIYFSQDATPGKTFHYSKDSVKGIYKIQRYDRQTGEIEVLL-EGSGGAI 247

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA----------PT--WS 398
            P  SP G  +A+    G + A+ +   +   +R +  D +             PT  W+
Sbjct: 248 RPTPSPDGRQLAYIARDGFQSALYLYDLESGDKRQVYADLDRDMQETWAIHGVYPTMAWT 307

Query: 399 PSGRSLIF 406
           P   +++F
Sbjct: 308 PDNDAILF 315



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 108/324 (33%), Gaps = 69/324 (21%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YAT 230
           +RI F S+          +  +  DG++++ +T    ++L  P +SP+ Q +     Y  
Sbjct: 102 TRIAFTSDQDGGDN----IWTVKLDGSDMQPVTKETFRLLNSPAWSPDGQYLVGRKHYTA 157

Query: 231 YDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALIS----------VQK 278
                   V++      +  +     N +  +  P FS +G+    S            K
Sbjct: 158 QRSLGAGEVWMYHISGGKGIQLTERPNDQKDLGEPAFSPDGRYIYFSQDATPGKTFHYSK 217

Query: 279 D---EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           D       I   D Q+   E L       I  + SPD  Q+ + +    +  LY+     
Sbjct: 218 DSVKGIYKIQRYDRQTGEIEVLLEGSGGAIRPTPSPDGRQLAYIARDGFQSALYLYDLES 277

Query: 336 SDQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-- 383
            D++++          +      Y    W+P  D I F  ++G    I  +  D  +   
Sbjct: 278 GDKRQVYADLDRDMQETWAIHGVYPTMAWTPDNDAILF--WAGG--EIRKLTLDSGEVEA 333

Query: 384 ---RLLVE---------DSNLQAPTW----------SPSGRSLIFSRKKDGDTGSKLYSI 421
              ++ V+           NL    +          SP G  + F      +   K++  
Sbjct: 334 IPFQVTVDKQVQPALRFQQNLDEDRFDLKMLRQVQISPDGEQVAF------EALGKIWLR 387

Query: 422 DL-NGRNETLI-NTPAYASDPQWV 443
            L +G+ + L      +   P W 
Sbjct: 388 SLPDGKPQRLTRQDDTFELFPAWS 411



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 100/251 (39%), Gaps = 40/251 (15%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG   + LT   D     P +S + +K+AY T+DD++  +V + D R  R    I    
Sbjct: 390 PDGK-PQRLTRQDDTFELFPAWSRDGRKLAYVTWDDKEQGQVVVRDLRRKRNT-VITVEP 447

Query: 258 SMILAPRFSSNGKRALISVQK---------DEAMDIYSVDLQSNA--TERLTNTLFINIS 306
              + P FS +G+  +    K         +    IY VDL +     +R++        
Sbjct: 448 GKYVEPAFSPDGEALVFRKSKGYYITPRSWNREPGIYWVDLDAKKAEPQRISRRGHT--- 504

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +   S ++ F +   GK  L  + ++G + +R+    + +    V SP G  +AF + 
Sbjct: 505 PHFGGQSDRVFFSTMEGGKTALASVGTHGFE-ERVHFTSDHASEWHV-SPDGKHLAFAER 562

Query: 367 ----------SGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                      GE   +G    DG     + L + +     +W   G+SL +S       
Sbjct: 563 FKVFLTPFAQHGETLHLG---PDGGSLPVKQLSQRAGENI-SWRLDGQSLHWS------L 612

Query: 415 GSKLYSIDLNG 425
           G  LY + L+G
Sbjct: 613 GPNLYQVSLDG 623



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 91/254 (35%), Gaps = 43/254 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------------ 265
            ++P+   + +  +   +I ++ L    ++  P ++   + +  A RF            
Sbjct: 305 AWTPDNDAILF--WAGGEIRKLTLDSGEVEAIPFQVTVDKQVQPALRFQQNLDEDRFDLK 362

Query: 266 -------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIV 317
                  S +G++            I+   L     +RLT       +  ++S D  ++ 
Sbjct: 363 MLRQVQISPDGEQVAFEA----LGKIWLRSLPDGKPQRLTRQDDTFELFPAWSRDGRKLA 418

Query: 318 F-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-------- 368
           +   D + + Q+ V          I+ +    Y +P +SP G+ + F K  G        
Sbjct: 419 YVTWDDKEQGQVVVRDLRRKRNTVITVE-PGKYVEPAFSPDGEALVFRKSKGYYITPRSW 477

Query: 369 -EKFAIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             +  I  +  D    + + +    +   P +      + FS  + G T   L S+  +G
Sbjct: 478 NREPGIYWVDLDAKKAEPQRISRRGHT--PHFGGQSDRVFFSTMEGGKTA--LASVGTHG 533

Query: 426 RNETLINTPAYASD 439
             E +  T  +AS+
Sbjct: 534 FEERVHFTSDHASE 547



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 41/103 (39%), Gaps = 9/103 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRS 403
            + ++ +   SP G  + F         I  M   G     LV+  +    P +SP G  
Sbjct: 48  SQGTWMNLDISPDGKTLVFDLLGD----IYTMPIGGGDATPLVKGIAWHMQPRFSPDGTR 103

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
           + F+  +DG  G  ++++ L+G +   +    +   + P W  
Sbjct: 104 IAFTSDQDG--GDNIWTVKLDGSDMQPVTKETFRLLNSPAWSP 144


>gi|221195922|ref|ZP_03568969.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Burkholderia multivorans CGD2M]
 gi|221202595|ref|ZP_03575614.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Burkholderia multivorans CGD2]
 gi|221176529|gb|EEE08957.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Burkholderia multivorans CGD2]
 gi|221182476|gb|EEE14876.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Burkholderia multivorans CGD2M]
          Length = 675

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 54/312 (17%), Positives = 114/312 (36%), Gaps = 60/312 (19%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +    +   +++L ++D DG          +     PR+ P +Q +A+ + D     +++
Sbjct: 34  TPDRDADDYRSALWLVDIDGGRPPRQLTFGN-ADSHPRWCPGEQALAFLS-DRGSGRQIH 91

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--------------------------- 273
            + T      +R+ +  S +++  +S +GK+ L                           
Sbjct: 92  AIRTD-GGEARRVTDLPSGVMSFEWSPDGKQLLALCTIAADPEQRGNTHGDSDEAADRPA 150

Query: 274 ---------------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                          +    D  + ++++D Q+ A+ RLT   F    A +SPD  +I F
Sbjct: 151 DAPRVVWRLPYKLDGVGYTLDTEIHLHTIDAQTGASRRLTRGSFEVSEADWSPDGQRIAF 210

Query: 319 ESDREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---KFSGEKF 371
              R+G    +  ++V+ ++G + ++++    AS   P WSP G  IA          + 
Sbjct: 211 TRTRDGRFAHRTDVWVVDADGGNARQLTS-TIASAAFPRWSPDGRFIALIGSEHDGDAQM 269

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            + +        R L +D +++  +     WS     L F     G       ++  +G 
Sbjct: 270 RLWLHDVRTGDTRALGDD-DIEVVSGRTVFWSHDSTRLYFVLAHHGRQEVATIAV-ADGT 327

Query: 427 NETLINTPAYAS 438
              +I       
Sbjct: 328 LRRVITGDRQVG 339



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 97/276 (35%), Gaps = 29/276 (10%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G    +LC +  D           D+    P    +  +V +     +     Y +DT
Sbjct: 117 PDGKQLLALCTIAADPEQRGNTHGDSDEAADRPA---DAPRVVW-RLPYKLDGVGYTLDT 172

Query: 245 RIDRAP--------KRIGNFRSMILAPRFSSNGKRALISVQKDEA----MDIYSVDLQSN 292
            I            +R+      +    +S +G+R   +  +D       D++ VD    
Sbjct: 173 EIHLHTIDAQTGASRRLTRGSFEVSEADWSPDGQRIAFTRTRDGRFAHRTDVWVVDADGG 232

Query: 293 ATERLTNTLFINISASYSPDSSQIVFE-SDREG--KEQLYVMQSNGSDQKRISQDK--EA 347
              +LT+T+       +SPD   I    S+ +G  + +L++      D + +  D     
Sbjct: 233 NARQLTSTIASAAFPRWSPDGRFIALIGSEHDGDAQMRLWLHDVRTGDTRALGDDDIEVV 292

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           S     WS     + F      +  +  +   DG+  R++  D  +       +G  L++
Sbjct: 293 SGRTVFWSHDSTRLYFVLAHHGRQEVATIAVADGTLRRVITGDRQVGRFALGANG--LLY 350

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           +   D  T + +++  L+G  E  +       +P W
Sbjct: 351 TSD-DARTPADIWTAALDGSGERRLT----DFNPWW 381


>gi|159901043|ref|YP_001547290.1| serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159894082|gb|ABX07162.1| serine/threonine protein kinase [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 646

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 97/240 (40%), Gaps = 25/240 (10%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             +    +ED          +   P+++            S +G++   + ++D    +Y
Sbjct: 367 YFFVGMREEDGDYQIYRIPAMGGEPQQLTTL-GSNYGGVVSPDGRQIAFTSERDGREQVY 425

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKR 340
            + +  +   R+TN        S+SPD  Q+ +   R     E    +Y+   + ++ ++
Sbjct: 426 VMKVDGSDQRRVTNDPGRCEYPSWSPDGKQLAYAHRRLDDLKENSSTIYIQALDQTEGQQ 485

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKKDGSQERLL--VEDSNLQA 394
           +++        P W  QG  I FT      + E+  + +++ DGS  +++    D +   
Sbjct: 486 LTKMWG---TMPTWGQQG--IVFTSRDIVENIEQLGLAIIQPDGSGLKIINPTRDRDEHY 540

Query: 395 PTWSPSGRSLIF-SRKKDGDTGSKLYSIDLNGRNETL-------INTPAYASDPQWVGFM 446
             WSP G+S+ + +         +++ ++ +G N          +  P ++ D +W+ F+
Sbjct: 541 AEWSPDGKSIAYVAGDSQRTITRQIWVMNADGSNPHPLTKGLGGVTQPRWSPDGKWIVFL 600



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 58/146 (39%), Gaps = 12/146 (8%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I+F S  +V  I +  L ++  DG+ ++ + P+RD+      +SP+ + +AY   D +  
Sbjct: 501 IVFTSRDIVENIEQLGLAIIQPDGSGLKIINPTRDRDEHYAEWSPDGKSIAYVAGDSQRT 560

Query: 237 LRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD----------IY 285
           +   +     D   P  +      +  PR+S +GK  +  + K    D          ++
Sbjct: 561 ITRQIWVMNADGSNPHPLTKGLGGVTQPRWSPDGKWIVF-LAKWGMPDDLQNNRPRFNVW 619

Query: 286 SVDLQSNATERLTNTLFINISASYSP 311
            V  +    +  T +        + P
Sbjct: 620 VVSTEGGPAKPFTISEANKFGLGWGP 645



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G      +     + I  +   G + + L    +      SP GR + F+ ++DG    +
Sbjct: 366 GYFFVGMREEDGDYQIYRIPAMGGEPQQLTTLGSNYGGVVSPDGRQIAFTSERDGR--EQ 423

Query: 418 LYSIDLNGRNETLI-NTPAYASDPQWVG 444
           +Y + ++G ++  + N P     P W  
Sbjct: 424 VYVMKVDGSDQRRVTNDPGRCEYPSWSP 451


>gi|163756342|ref|ZP_02163456.1| WD40-like repeat/amidohydrolase domain protein [Kordia algicida
           OT-1]
 gi|161323694|gb|EDP95029.1| WD40-like repeat/amidohydrolase domain protein [Kordia algicida
           OT-1]
          Length = 1094

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 53/238 (22%), Positives = 92/238 (38%), Gaps = 26/238 (10%)

Query: 226 VAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           +A+A      +   V       +    +        +    S NGK  +     D   DI
Sbjct: 17  IAFAQDKKNTEKWDVSNPKGDFNYKDHKFTTTEGTWMNLDVSPNGKTIVF----DMLGDI 72

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           Y++ +     + L   +   I   +SPD S+I+F SD  G + ++VM +NGSD K+I+++
Sbjct: 73  YTIPVSGGTAKALRTGIPFEIQPHFSPDGSKILFTSDAGGGDNIWVMNANGSDAKQITKE 132

Query: 345 KEASYFDPVWSPQGD-LIAFTKFSGEKF----AIGVMKKDGSQERLLVE----DSNLQAP 395
                 +  W P G+  IA   F+  +      +      G     + +      ++  P
Sbjct: 133 SFRLLNNSTWMPDGNAFIARKHFTSTRSLGAGEMWQYHITGGSGLQITKRKNAQQDVNEP 192

Query: 396 TWSPSGRSLIFSRK--------KDGDTGSKLYSIDL----NGRNETLINTPAYASDPQ 441
           + SP GR L +S           + D   ++Y I       G+   +   P  AS PQ
Sbjct: 193 SVSPDGRYLYYSEDVYPGGSFQYNKDPNKQIYVIKRYDFQTGKTTQITGGPGGASRPQ 250



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 55/359 (15%), Positives = 111/359 (30%), Gaps = 95/359 (26%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ------QKVAY 228
           S+ILF S++         + VM+ +G++ + +T    ++L    + P+       +    
Sbjct: 102 SKILFTSDAGGGDN----IWVMNANGSDAKQITKESFRLLNNSTWMPDGNAFIARKHFTS 157

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----------VQK 278
                   +  Y +         +  N +  +  P  S +G+    S            K
Sbjct: 158 TRSLGAGEMWQYHITGGSGLQITKRKNAQQDVNEPSVSPDGRYLYYSEDVYPGGSFQYNK 217

Query: 279 DEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           D    IY +   D Q+  T ++T           S D  ++ F      K  LY+     
Sbjct: 218 DPNKQIYVIKRYDFQTGKTTQITGGPGGASRPQISRDGKKLAFIKRVRTKSVLYLHDLQT 277

Query: 336 SDQ----------KRISQDKEASYFDPVWSPQGDLIAF---------------------- 363
            ++          ++ +      Y +  W P  + I F                      
Sbjct: 278 GEEWPLYDALDKDQQEAWAIFGVYPNFSWMPNNNEIVFWADGKIQKINITSLQVTNIPFK 337

Query: 364 --------------TKFSGEKFAI-----GVMKKDG------------------SQERLL 386
                         T  S + F        V   DG                     + L
Sbjct: 338 VNANIQIAEAVSFNTPVSPKNFDAKVIRQAVTSPDGKTLIFNAVGYLWKKNLPNGTPKRL 397

Query: 387 VEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWV 443
            + ++ ++ P++SP G+ +++    D + G+ +  I +NG N   ++T       P + 
Sbjct: 398 TQGTDFESEPSFSPDGKEIVYVTWNDLNLGT-IRKISINGGNSMQLSTEKGSFRTPSFS 455



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 83/206 (40%), Gaps = 30/206 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + + +      + +         +  PKR+         P FS +GK  +     D
Sbjct: 370 SPDGKTLIF------NAVGYLWKKNLPNGTPKRLTQGTDFESEPSFSPDGKEIVYVTWND 423

Query: 280 EAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ---------LY 329
             +  I  + +    + +L+       + S+S D + IV+  +R   +Q         +Y
Sbjct: 424 LNLGTIRKISINGGNSMQLSTEKGSFRTPSFSLDGTHIVYRKERGNSDQGFTFAKNAGIY 483

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVMKKDGSQER 384
            M+++GS+ K ++   E     P++S  G  I F +  G  F     A+  +   G+ +R
Sbjct: 484 TMKADGSNSKFVTAQGEY----PIFSADGKRI-FIQTGGTYFGSLTKALHSVNLQGNDKR 538

Query: 385 L--LVEDSNLQAPTWSPSGRSLIFSR 408
                + +N   P  SP  + + FS+
Sbjct: 539 THFTSKYANRIVP--SPDNKWIAFSQ 562



 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 91/279 (32%), Gaps = 36/279 (12%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              T  +G + +  +  +   +   +   +  +   G   + L         +P FSP+ 
Sbjct: 43  HKFTTTEGTWMNLDVSPNGKTIVFDMLGDIYTIPVSGGTAKALRTG-IPFEIQPHFSPDG 101

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG-----KRALISVQK 278
            K+ + + D      +++M+     A +       ++    +  +G     ++   S + 
Sbjct: 102 SKILFTS-DAGGGDNIWVMNANGSDAKQITKESFRLLNNSTWMPDGNAFIARKHFTSTRS 160

Query: 279 DEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIV----------FESDREGK 325
             A +++   +   +  ++T   N        S SPD   +           F+ +++  
Sbjct: 161 LGAGEMWQYHITGGSGLQITKRKNAQQDVNEPSVSPDGRYLYYSEDVYPGGSFQYNKDPN 220

Query: 326 EQLYVM---QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +Q+YV+           +I+         P  S  G  +AF K    K  + +      +
Sbjct: 221 KQIYVIKRYDFQTGKTTQIT-GGPGGASRPQISRDGKKLAFIKRVRTKSVLYLHDLQTGE 279

Query: 383 ERLLVED------------SNLQAPTWSPSGRSLIFSRK 409
           E  L +                   +W P+   ++F   
Sbjct: 280 EWPLYDALDKDQQEAWAIFGVYPNFSWMPNNNEIVFWAD 318



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 92/298 (30%), Gaps = 51/298 (17%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYA-TYDDEDILR 238
           S        K    +   D    +             P+ S + +K+A+      + +L 
Sbjct: 212 SFQYNKDPNKQIYVIKRYDFQTGKTTQITGGPGGASRPQISRDGKKLAFIKRVRTKSVLY 271

Query: 239 VYLMDTR--------IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           ++ + T         +D+  +       +     +  N    +          I  +++ 
Sbjct: 272 LHDLQTGEEWPLYDALDKDQQEAWAIFGVYPNFSWMPNNNEIVFWADG----KIQKINIT 327

Query: 291 SNATE----------RLTNTLFINI-------------SASYSPDSSQIVFESDREGKEQ 327
           S              ++   +  N               A  SPD   ++F +       
Sbjct: 328 SLQVTNIPFKVNANIQIAEAVSFNTPVSPKNFDAKVIRQAVTSPDGKTLIFNA----VGY 383

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLL 386
           L+         KR++Q  +    +P +SP G  I +  ++      I  +  +G     L
Sbjct: 384 LWKKNLPNGTPKRLTQGTD-FESEPSFSPDGKEIVYVTWNDLNLGTIRKISINGGNSMQL 442

Query: 387 -VEDSNLQAPTWSPSGRSLIFSRKKDGD-------TGSKLYSIDLNGRNETLINTPAY 436
             E  + + P++S  G  +++ +++            + +Y++  +G N   +     
Sbjct: 443 STEKGSFRTPSFSLDGTHIVYRKERGNSDQGFTFAKNAGIYTMKADGSNSKFVTAQGE 500


>gi|88704759|ref|ZP_01102472.1| peptidase yuxL [Congregibacter litoralis KT71]
 gi|88701080|gb|EAQ98186.1| peptidase yuxL [Congregibacter litoralis KT71]
          Length = 665

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 59/335 (17%), Positives = 118/335 (35%), Gaps = 62/335 (18%)

Query: 163 YQSITGEKGDFNSRILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            + +   +   + R +  + S         +  + +M  +G     +T S D     PR+
Sbjct: 34  MERVRDPQISPDGRWVAYTVSQKDLEEDKSRTRIWMMSTEGGEPIPMT-SPDSSASRPRW 92

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +++     E+         R+     ++ N +  +    +S +G R L++++  
Sbjct: 93  SPDNKYLSFTASRGENARTQVWSLNRLGGEAMQVTNVKQGVSDFAWSPDGTRLLLTIKDP 152

Query: 280 EAMD-----------------------------------IYSVDLQSNATERLTNTLFIN 304
              D                                   +Y      +A  ++T   + +
Sbjct: 153 RPADLTEDKDDDDKPLPYVIDRMQFKQDYQGYLDRRRDHLYVYTPGDDAPVQITFGDYDD 212

Query: 305 ISASYSPDSSQIVFESDREGKE------QLYVMQSNGSDQKR--ISQDKEASYFDPVWSP 356
               +SPD   + F SDR           ++V+  +  + +   I++D       P WSP
Sbjct: 213 DDPVWSPDGKSVAFVSDRSENPDLYYGSNIWVVDVDDENHRLKKITKDS-GRERSPSWSP 271

Query: 357 QGDLIAFTKFSGEKF---------AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
            G  IA+    G             + + + DG + ++L    D NL  P +S  GR + 
Sbjct: 272 DGKSIAYISSLGPDVGGSALTPTRRLALARLDGEKRQILTPKLDRNLSDPQFSDDGRRIS 331

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETL-INTPAYASD 439
           F  + +G     L SI  +G+N    +  P    D
Sbjct: 332 FRLEDEGQV--HLASIGTDGKNFRRDLEGPVTVRD 364



 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 106/288 (36%), Gaps = 62/288 (21%)

Query: 216 EPRFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +P+ SP+ + VAY        +D+   R+++M T     P  + +  S    PR+S + K
Sbjct: 39  DPQISPDGRWVAYTVSQKDLEEDKSRTRIWMMSTE-GGEPIPMTSPDSSASRPRWSPDNK 97

Query: 271 RALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----------- 317
               +  + E     ++S++       ++TN        ++SPD ++++           
Sbjct: 98  YLSFTASRGENARTQVWSLNRLGGEAMQVTNVKQGVSDFAWSPDGTRLLLTIKDPRPADL 157

Query: 318 ------------FESDR------------EGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                       +  DR              ++ LYV         +I+   +    DPV
Sbjct: 158 TEDKDDDDKPLPYVIDRMQFKQDYQGYLDRRRDHLYVYTPGDDAPVQITF-GDYDDDDPV 216

Query: 354 WSPQGDLIAFTKFSGEK------FAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSL 404
           WSP G  +AF     E         I V+  D    R   +  +    ++P+WSP G+S+
Sbjct: 217 WSPDGKSVAFVSDRSENPDLYYGSNIWVVDVDDENHRLKKITKDSGRERSPSWSPDGKSI 276

Query: 405 IFSRKKDGDTGS-------KLYSIDLNGRNETLIN--TPAYASDPQWV 443
            +      D G        +L    L+G    ++        SDPQ+ 
Sbjct: 277 AYISSLGPDVGGSALTPTRRLALARLDGEKRQILTPKLDRNLSDPQFS 324



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 8/103 (7%)

Query: 350 FDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGR 402
            DP  SP G  +A+T      +    +  I +M  +G +   +   DS+   P WSP  +
Sbjct: 38  RDPQISPDGRWVAYTVSQKDLEEDKSRTRIWMMSTEGGEPIPMTSPDSSASRPRWSPDNK 97

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQWVG 444
            L F+  +  +  ++++S++ L G    + N     SD  W  
Sbjct: 98  YLSFTASRGENARTQVWSLNRLGGEAMQVTNVKQGVSDFAWSP 140



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 22/194 (11%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL--------RVYLM 242
             L +   DG   + LTP  D+ L +P+FS + +++++   D+  +         + +  
Sbjct: 295 RRLALARLDGEKRQILTPKLDRNLSDPQFSDDGRRISFRLEDEGQVHLASIGTDGKNFRR 354

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D       + +     M +    S++    L S+      D Y   L S   E L +   
Sbjct: 355 DLEGPVTVRDVARRGDMTVVLAESADQPANLFSLS-----DGYLSTLTSVNAELLADVSR 409

Query: 303 INIS--ASYSPDSSQI-VF----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             +   A  S D +++  F        EGK    ++  +G    + S          +++
Sbjct: 410 PQVEKRAFASADGTEVEAFYVKPVGYEEGKRYPTILWLHGGPASQFSY--SYRDTAQLFA 467

Query: 356 PQGDLIAFTKFSGE 369
             G  +      G 
Sbjct: 468 ANGYAVIMPNPRGS 481


>gi|157373159|ref|YP_001471759.1| amidohydrolase [Shewanella sediminis HAW-EB3]
 gi|157315533|gb|ABV34631.1| amidohydrolase [Shewanella sediminis HAW-EB3]
          Length = 1081

 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 80/206 (38%), Gaps = 25/206 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               +    S NGK  +     D   DIY + ++    + L   +   +   YSPD   I
Sbjct: 53  EGTWMNVSVSPNGKHIVF----DMLGDIYQIPMKGGEAKVLAKGIAWQMQPVYSPDGKYI 108

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FT-KFSGEKF 371
            F SD +G + ++VM+++GS+ + ++++       P WSP    +     FT   S    
Sbjct: 109 AFTSDEDGGDNIWVMEADGSNPRAVTEETFRLLNSPAWSPDSQYLVARKHFTGSRSLGAG 168

Query: 372 AIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLY 419
            + +    G +   L +  N Q     P +SP GR + FS+            D+   +Y
Sbjct: 169 EVWMYHVAGGEGVKLTKRPNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVKGIY 228

Query: 420 SI----DLNGRNETLINTPAYASDPQ 441
            I       G  E LI     A  P 
Sbjct: 229 KIKRYDTQTGDIEVLIEGTGGAIRPT 254



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 93/236 (39%), Gaps = 31/236 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN + + +      DI ++ +         K +    +  + P +S +GK    +  
Sbjct: 60  SVSPNGKHIVF--DMLGDIYQIPMK----GGEAKVLAKGIAWQMQPVYSPDGKYIAFTSD 113

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVM 331
           +D   +I+ ++   +    +T   F +  S ++SPDS  +V    F   R  G  ++++ 
Sbjct: 114 EDGGDNIWVMEADGSNPRAVTEETFRLLNSPAWSPDSQYLVARKHFTGSRSLGAGEVWMY 173

Query: 332 QSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVM 376
              G +  ++++         +P +SP G  I F++ +                + I   
Sbjct: 174 HVAGGEGVKLTKRPNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVKGIYKIKRY 233

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
                   +L+E       PT SP G+ L + ++      S LY +DL +G  E L
Sbjct: 234 DTQTGDIEVLIEGTGGAIRPTPSPDGKKLAYIKRDG--FQSSLYMLDLRSGETEKL 287



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 19/202 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQ 277
           SP+ +KV Y       +    L D + D    R+    S    L P++S +GK  + +  
Sbjct: 374 SPDGKKVVYEAL--GKLWVKSLSDGKSDGKRTRLTKLDSELRELFPQWSRDGKSIVFTTW 431

Query: 278 KD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQ 327
            D E   +  V L++   + LT      +  ++SPD S +V+   + G            
Sbjct: 432 DDLEQGSVRVVSLRNKRVKTLTKEPGKYVEPTFSPDGSFVVYRKAKGGYITPRSWSQETG 491

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           LY + + G +  +I+ D     + P +  + D + F    GE   +  +  DG Q+R+  
Sbjct: 492 LYRVDTKGKENIKITPDG----YQPQFGAESDRVYFMDH-GETPELASINLDGFQKRVHY 546

Query: 388 EDSNLQAPTWSPSGRSLIFSRK 409
              +      SP G+ L F+ +
Sbjct: 547 TSKHATEFRVSPDGKQLAFAER 568



 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 103/296 (34%), Gaps = 42/296 (14%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +  +   +   +   +  +   G   + L         +P +SP+ + +A+ 
Sbjct: 53  EGTWMNVSVSPNGKHIVFDMLGDIYQIPMKGGEAKVLAKG-IAWQMQPVYSPDGKYIAFT 111

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           + D++    +++M+               ++ +P +S + +  +     +  +   A ++
Sbjct: 112 S-DEDGGDNIWVMEADGSNPRAVTEETFRLLNSPAWSPDSQYLVARKHFTGSRSLGAGEV 170

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDRE-------------GKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 171 WMYHVAGGEGVKLTKRPNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKDSVKGIYKI 230

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   D + +  +       P  SP G  +A+ K  G + ++ ++     +   L  
Sbjct: 231 KRYDTQTGDIEVLI-EGTGGAIRPTPSPDGKKLAYIKRDGFQSSLYMLDLRSGETEKLYG 289

Query: 389 --DSNLQA--------P--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             D ++Q         P  +W+     ++F        G K+  +D+  ++   I 
Sbjct: 290 KLDRDMQETWAIHGVYPTMSWTGDNEEIVFWA------GGKINKLDVESKSVKQIP 339



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 63/331 (19%), Positives = 115/331 (34%), Gaps = 63/331 (19%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQK 225
               D    +     +    +    + +    G     LT  P+  + L EP +SP+ + 
Sbjct: 145 AWSPDSQYLVARKHFTGSRSLGAGEVWMYHVAGGEGVKLTKRPNEQKDLGEPAYSPDGRY 204

Query: 226 VA------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +             Y+    + I ++   DT+     + +       + P  S +GK+  
Sbjct: 205 IYFSQDATPGKTFHYSKDSVKGIYKIKRYDTQTGD-IEVLIEGTGGAIRPTPSPDGKKLA 263

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-----------ASYSPDSSQIVFESDR 322
              +      +Y +DL+S  TE+L   L  ++             S++ D+ +IVF +  
Sbjct: 264 YIKRDGFQSSLYMLDLRSGETEKLYGKLDRDMQETWAIHGVYPTMSWTGDNEEIVFWA-- 321

Query: 323 EGKEQLYVMQSNGSDQKRI----------------SQDKEASYFD------PVWSPQGDL 360
               ++  +       K+I                +QD +   FD         SP G  
Sbjct: 322 --GGKINKLDVESKSVKQIPFSIKTQLDVQPAVRFTQDLDKDKFDVKMLRMAQVSPDGKK 379

Query: 361 IAFTKFSGEKFAIGVMKK-----DGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGD 413
           + +         + V        DG + RL   DS L+   P WS  G+S++F+   D +
Sbjct: 380 VVYEALG----KLWVKSLSDGKSDGKRTRLTKLDSELRELFPQWSRDGKSIVFTTWDDLE 435

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            GS       N R +TL   P    +P +  
Sbjct: 436 QGSVRVVSLRNKRVKTLTKEPGKYVEPTFSP 466



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 106/287 (36%), Gaps = 42/287 (14%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V    +  +   SL     DG   R      +     P++S + + + + T+DD +   V
Sbjct: 380 VVYEALGKLWVKSLSDGKSDGKRTRLTKLDSELRELFPQWSRDGKSIVFTTWDDLEQGSV 439

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---------IYSVDLQ 290
            ++  R ++  K +       + P FS +G   +    K   +          +Y VD +
Sbjct: 440 RVVSLR-NKRVKTLTKEPGKYVEPTFSPDGSFVVYRKAKGGYITPRSWSQETGLYRVDTK 498

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                ++T   +      +  +S ++ F  D     +L  +  +G  QKR+    + +  
Sbjct: 499 GKENIKITPDGY---QPQFGAESDRVYFM-DHGETPELASINLDGF-QKRVHYTSKHA-T 552

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------------TWS 398
           +   SP G  +AF     E+F + V       E + +       P            +W+
Sbjct: 553 EFRVSPDGKQLAFA----ERFKVWVTPFAKHGETIEIGPKANNLPVTQLSVRAGESISWN 608

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNG----RNETLINTPAYASDPQ 441
                L ++       G +LY ++++     +++T  +  A A +PQ
Sbjct: 609 NDSDQLYWT------LGPELYQVEVDTAYAAKDKTADDKQAKAIEPQ 649



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 9/103 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRS 403
            E ++ +   SP G  I F         I  +   G + ++L +    Q  P +SP G+ 
Sbjct: 52  TEGTWMNVSVSPNGKHIVFDMLGD----IYQIPMKGGEAKVLAKGIAWQMQPVYSPDGKY 107

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
           + F+  +DG  G  ++ ++ +G N   +    +   + P W  
Sbjct: 108 IAFTSDEDG--GDNIWVMEADGSNPRAVTEETFRLLNSPAWSP 148


>gi|114321544|ref|YP_743227.1| WD40 domain-containing protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227938|gb|ABI57737.1| WD40 domain protein beta Propeller [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 352

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 47/205 (22%), Positives = 86/205 (41%), Gaps = 9/205 (4%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D A  R+ +     + PR+S + +R     ++D   DIY +D   +  +RLT++  ++  
Sbjct: 53  DGAIVRLTDPAHSDMDPRWSPDRQRIAFVSRRDGNGDIYLMDADGSNQQRLTHSERMDFM 112

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             + P    + F S R     ++++     + + +S +   S     WSP G  +A    
Sbjct: 113 PQWHPSGDYLAFTSSRVSPRGVFLLDLATGEARLLS-EAVRSPEALRWSPDGGQLAVIAR 171

Query: 367 SG--EKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            G     AI V+  +     +LV       N+Q+  W PSG  L ++   D     +LY 
Sbjct: 172 PGGEGGNAIMVIDLEDDGHSILVPNDRHAGNVQSLAWHPSGDYLAYTASTDNRREVQLYV 231

Query: 421 IDL-NGRNETLINTPAYAS-DPQWV 443
           + +  G +E + + P      P W 
Sbjct: 232 LHVQEGHSEQVASAPGNVRGFPVWS 256



 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 6/178 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L    ++ A  IYS  L   A  RLT+    ++   +SPD  +I F S R+G   +Y+M
Sbjct: 34  VLFVSNQEGAQSIYSASLNDGAIVRLTDPAHSDMDPRWSPDRQRIAFVSRRDGNGDIYLM 93

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-S 390
            ++GS+Q+R++   E   F P W P GD +AFT        + ++     + RLL E   
Sbjct: 94  DADGSNQQRLTH-SERMDFMPQWHPSGDYLAFTSSRVSPRGVFLLDLATGEARLLSEAVR 152

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNETLINT--PAYASDPQWVG 444
           + +A  WSP G  L    +  G+ G+ +  IDL  +G +  + N           W  
Sbjct: 153 SPEALRWSPDGGQLAVIARPGGEGGNAIMVIDLEDDGHSILVPNDRHAGNVQSLAWHP 210



 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 107/259 (41%), Gaps = 17/259 (6%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DGA +R   P+      +PR+SP++Q++A+ +  D +   +YLMD       +R+ +   
Sbjct: 53  DGAIVRLTDPAHS--DMDPRWSPDRQRIAFVSRRDGNG-DIYLMDAD-GSNQQRLTHSER 108

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           M   P++  +G     +  +     ++ +DL +     L+  +    +  +SPD  Q+  
Sbjct: 109 MDFMPQWHPSGDYLAFTSSRVSPRGVFLLDLATGEARLLSEAVRSPEALRWSPDGGQLAV 168

Query: 319 ESDRE--GKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +     G   + V+         +  +     +     W P GD +A+T  +  +  + 
Sbjct: 169 IARPGGEGGNAIMVIDLEDDGHSILVPNDRHAGNVQSLAWHPSGDYLAYTASTDNRREVQ 228

Query: 375 VMKK---DGSQERLLVEDSNLQ-APTWSPSGRSLIFSRK---KDGDTGSKLYSIDL--NG 425
           +      +G  E++     N++  P WS  G  L+++        +T + +Y+     +G
Sbjct: 229 LYVLHVQEGHSEQVASAPGNVRGFPVWSTDGDWLVYASTATPAPEETKTNIYASRFPDDG 288

Query: 426 RNETLINTPAYASDPQWVG 444
           R  T+       + P W+ 
Sbjct: 289 RPVTVATLDGQLAQPVWLP 307



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 63/301 (20%), Positives = 121/301 (40%), Gaps = 25/301 (8%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            ++D  +  +         RI FVS    +G     + +MD DG+N + LT S +++ F 
Sbjct: 58  RLTDPAHSDMDPRWSPDRQRIAFVSRRDGNG----DIYLMDADGSNQQRLTHS-ERMDFM 112

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P++ P+   +A+ +        V+L+D     A + +        A R+S +G +  +  
Sbjct: 113 PQWHPSGDYLAFTSSRV-SPRGVFLLDLATGEA-RLLSEAVRSPEALRWSPDGGQLAVIA 170

Query: 277 QKD--EAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKE--QLY 329
           +        I  +DL+ +    L           S ++ P    + + +  + +   QLY
Sbjct: 171 RPGGEGGNAIMVIDLEDDGHSILVPNDRHAGNVQSLAWHPSGDYLAYTASTDNRREVQLY 230

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-----EKFAIGVMKK--DGSQ 382
           V+       ++++         PVWS  GD + +   +       K  I   +   DG  
Sbjct: 231 VLHVQEGHSEQVASAPGNVRGFPVWSTDGDWLVYASTATPAPEETKTNIYASRFPDDGRP 290

Query: 383 ERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTPAYASDP 440
             +   D  L  P W P  G  ++F  +K G   ++L+   ++G   +L+   PAY   P
Sbjct: 291 VTVATLDGQLAQPVWLPNDGGEVVFVSQKGG--AAELFRGRVDGAEPSLVFAQPAYMHSP 348

Query: 441 Q 441
           +
Sbjct: 349 R 349



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 93/288 (32%), Gaps = 34/288 (11%)

Query: 63  GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF-QDWNSLGAQVLVTGRVIKEGK 121
            +++ V  +D   +    L+  D   Q+         F   W+  G   L         +
Sbjct: 76  QRIAFVSRRD--GNGDIYLMDADGSNQQRLTHSERMDFMPQWHPSG-DYLAFTSSRVSPR 132

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                   L D+   +  +  +   SP + R                       ++  ++
Sbjct: 133 GVF-----LLDLATGEARLLSEAVRSPEALRWSPD-----------------GGQLAVIA 170

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA-TYDDEDILRVY 240
                G     +  ++ DG +I          +    + P+   +AY  + D+   +++Y
Sbjct: 171 RPGGEGGNAIMVIDLEDDGHSILVPNDRHAGNVQSLAWHPSGDYLAYTASTDNRREVQLY 230

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL------QSNAT 294
           ++  +   + +      ++   P +S++G   + +     A +    ++           
Sbjct: 231 VLHVQEGHSEQVASAPGNVRGFPVWSTDGDWLVYASTATPAPEETKTNIYASRFPDDGRP 290

Query: 295 ERLTNTLFINISASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +           + P D  ++VF S + G  +L+  + +G++   +
Sbjct: 291 VTVATLDGQLAQPVWLPNDGGEVVFVSQKGGAAELFRGRVDGAEPSLV 338


>gi|225011742|ref|ZP_03702180.1| WD40 domain protein beta Propeller [Flavobacteria bacterium
           MS024-2A]
 gi|225004245|gb|EEG42217.1| WD40 domain protein beta Propeller [Flavobacteria bacterium
           MS024-2A]
          Length = 304

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 86/209 (41%), Gaps = 20/209 (9%)

Query: 219 FSPNQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           FS + + V  ++    D      +Y +        +      S       S +GK  +  
Sbjct: 95  FSFDGKTVFISSGKKEDKSHTSYIYKVAAEGGVPVQITPKTPSYWHG--VSPDGKDIVYC 152

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +++   D+Y +++      RLT+T  ++    YSPD   I F S R  + Q++ M+ +G
Sbjct: 153 AERNGNYDVYKMNVDGGEEIRLTSTEGLDDGPEYSPDGMYIYFNSFRTKQMQIWRMKPDG 212

Query: 336 SDQKRISQDKEASYFDPVWSPQGD---LIAFTKFS------GEKFAIGVMKKDGSQERLL 386
           +  ++++ D  +++F    +P      LI++ +        G    + ++  +  + + L
Sbjct: 213 TQAEQMTFDNYSNWFA-HIAPNNSQAVLISYIENQEDKHPFGRAVKLRLIDLETKKIKDL 271

Query: 387 VE-----DSNLQAPTWSPSGRSLIFSRKK 410
            +        +  P+WSP G    + R +
Sbjct: 272 TDVFYGGQGTINVPSWSPDGLEFAYVRYE 300



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 83/221 (37%), Gaps = 17/221 (7%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQILFEPR 218
           D I +        F+ + +F+S          S +  +  +G     +TP      +   
Sbjct: 84  DQITKCNNDHGFSFDGKTVFISSGKKEDKSHTSYIYKVAAEGGVPVQITP--KTPSYWHG 141

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+ + + Y    + +   VY M+        R+ +   +   P +S +G     +  +
Sbjct: 142 VSPDGKDIVYCAERNGN-YDVYKMNVDGGEEI-RLTSTEGLDDGPEYSPDGMYIYFNSFR 199

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE---------QLY 329
            + M I+ +       E++T   + N  A  +P++SQ V  S  E +E         +L 
Sbjct: 200 TKQMQIWRMKPDGTQAEQMTFDNYSNWFAHIAPNNSQAVLISYIENQEDKHPFGRAVKLR 259

Query: 330 VMQSNGSDQKRIS---QDKEASYFDPVWSPQGDLIAFTKFS 367
           ++       K ++      + +   P WSP G   A+ ++ 
Sbjct: 260 LIDLETKKIKDLTDVFYGGQGTINVPSWSPDGLEFAYVRYE 300



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 74/213 (34%), Gaps = 24/213 (11%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT- 294
           I  +YL +       K I   +    AP +  N K  LI    +    +  + L+     
Sbjct: 25  ISNLYLYNIETG-LSKLILKEKRHFEAPNWIVNEKALLI----NSNGKLEKISLEGERLG 79

Query: 295 ----ERLTNTLFINISASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRISQDK 345
               +++T     N    +S D    VF S     D+     +Y + + G    +I+   
Sbjct: 80  ILDTDQITK---CNNDHGFSFDGKT-VFISSGKKEDKSHTSYIYKVAAEGGVPVQITPKT 135

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSL 404
            + +     SP G  I +       + +  M  DG +E  L         P +SP G  +
Sbjct: 136 PSYWHG--VSPDGKDIVYCAERNGNYDVYKMNVDGGEEIRLTSTEGLDDGPEYSPDGMYI 193

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            F+  +      +++ +  +G     +    Y+
Sbjct: 194 YFNSFRTKQM--QIWRMKPDGTQAEQMTFDNYS 224


>gi|254483262|ref|ZP_05096494.1| hypothetical protein GPB2148_301 [marine gamma proteobacterium
           HTCC2148]
 gi|214036485|gb|EEB77160.1| hypothetical protein GPB2148_301 [marine gamma proteobacterium
           HTCC2148]
          Length = 342

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/228 (24%), Positives = 102/228 (44%), Gaps = 17/228 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G+  +    S   +   P F+PN + + +++    +   ++   +       +I +  S 
Sbjct: 112 GSPAKSPISSDAGMNLTPAFTPNGRFLIFSSDRSGESQSLWRKRSDGAGGITQITSSNSF 171

Query: 260 ILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              P  +S+G+  +    +  ++A  I+S+++      +LT       S S SPD  +IV
Sbjct: 172 DWQPAIASDGETIIFQSHRKNNQAASIWSINMNGGLLTQLTEGR----SPSISPDGRRIV 227

Query: 318 FES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----FSGEKF 371
           F       GK+Q++ MQ +GS   ++S    A+  DP W P G  I F        G+ F
Sbjct: 228 FVRPDASTGKDQVWSMQVDGSGLTQLSS-GNANDVDPSWHPNGRYIVFASDAMVVQGDVF 286

Query: 372 ---AIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTG 415
               I +M+ DG+Q   L E+ S+  AP +   GR+++F   + G   
Sbjct: 287 ADYNIWIMRADGTQREQLTENFSHDDAPVFDRRGRTIVFRSNRGGHWN 334



 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 96/246 (39%), Gaps = 21/246 (8%)

Query: 201 ANIRYLTPS--RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            N++ LT +  R      P  SPNQ  + Y  +       +Y            I +   
Sbjct: 67  TNLKQLTNNTERSNQYNRPALSPNQDAMVYVEFAGGKS-SIYRQSLGSPAKS-PISSDAG 124

Query: 259 MILAPRFSSNGKRALISVQKDEAMD-IYSVDLQS-NATERLTNTLFINISASYSPDSSQI 316
           M L P F+ NG+  + S  +      ++           ++T++   +   + + D   I
Sbjct: 125 MNLTPAFTPNGRFLIFSSDRSGESQSLWRKRSDGAGGITQITSSNSFDWQPAIASDGETI 184

Query: 317 VFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFA 372
           +F+S R+  +   ++ +  NG    ++++ +      P  SP G  I F +   S  K  
Sbjct: 185 IFQSHRKNNQAASIWSINMNGGLLTQLTEGR-----SPSISPDGRRIVFVRPDASTGKDQ 239

Query: 373 IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRK---KDGD--TGSKLYSIDLNGR 426
           +  M+ DGS    L    +N   P+W P+GR ++F+       GD      ++ +  +G 
Sbjct: 240 VWSMQVDGSGLTQLSSGNANDVDPSWHPNGRYIVFASDAMVVQGDVFADYNIWIMRADGT 299

Query: 427 NETLIN 432
               + 
Sbjct: 300 QREQLT 305



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 98/273 (35%), Gaps = 27/273 (9%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            +       + VEF        K  I ++   SPA        IS D   ++T     F 
Sbjct: 86  ALSPNQDAMVYVEF-----AGGKSSIYRQSLGSPAKSP-----ISSDAGMNLTP---AFT 132

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
               F+  S        SL     DGA       S +   ++P  + + + + + ++   
Sbjct: 133 PNGRFLIFSSDRSGESQSLWRKRSDGAGGITQITSSNSFDWQPAIASDGETIIFQSHRKN 192

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--QKDEAMDIYSVDLQSN 292
           +                ++   R    +P  S +G+R +            ++S+ +  +
Sbjct: 193 NQAASIWSINMNGGLLTQLTEGR----SPSISPDGRRIVFVRPDASTGKDQVWSMQVDGS 248

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDRE-------GKEQLYVMQSNGSDQKRISQDK 345
              +L++    ++  S+ P+   IVF SD             +++M+++G+ +++++++ 
Sbjct: 249 GLTQLSSGNANDVDPSWHPNGRYIVFASDAMVVQGDVFADYNIWIMRADGTQREQLTENF 308

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                 PV+  +G  I F    G  + +     
Sbjct: 309 SHDD-APVFDRRGRTIVFRSNRGGHWNLFSFNP 340



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 81/187 (43%), Gaps = 9/187 (4%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S N    +          IY   L S A   +++   +N++ +++P+   ++F SDR
Sbjct: 85  PALSPNQDAMVYVEFAGGKSSIYRQSLGSPAKSPISSDAGMNLTPAFTPNGRFLIFSSDR 144

Query: 323 EGKEQ-LYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKK 378
            G+ Q L+  +S+G     +I+    +  + P  +  G+ I F        A  I  +  
Sbjct: 145 SGESQSLWRKRSDGAGGITQITS-SNSFDWQPAIASDGETIIFQSHRKNNQAASIWSINM 203

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYA 437
           +G     L E     +P+ SP GR ++F R        +++S+ ++G   T +++  A  
Sbjct: 204 NGGLLTQLTEGR---SPSISPDGRRIVFVRPDASTGKDQVWSMQVDGSGLTQLSSGNAND 260

Query: 438 SDPQWVG 444
            DP W  
Sbjct: 261 VDPSWHP 267



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 10/121 (8%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY---- 231
           RI+FV     +G  K+ +  M  DG+ +  L+        +P + PN + + +A+     
Sbjct: 225 RIVFVRPDASTG--KDQVWSMQVDGSGLTQLSSGNAN-DVDPSWHPNGRYIVFASDAMVV 281

Query: 232 --DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
             D      +++M     +  +   NF S   AP F   G+  +    +    +++S + 
Sbjct: 282 QGDVFADYNIWIMRADGTQREQLTENF-SHDDAPVFDRRGRTIVFRSNRGGHWNLFSFNP 340

Query: 290 Q 290
           Q
Sbjct: 341 Q 341


>gi|294138815|ref|YP_003554793.1| amidohydrolase family protein [Shewanella violacea DSS12]
 gi|293325284|dbj|BAJ00015.1| amidohydrolase family protein [Shewanella violacea DSS12]
          Length = 1079

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 80/211 (37%), Gaps = 25/211 (11%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +I       +    S NGK  +     D   DIY + +Q    + L   +   +  +YSP
Sbjct: 48  KIDVSEGTWMNISVSPNGKTIVF----DMLGDIYQIPMQGGEAKVLAKGIAWQMQPTYSP 103

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FT-KF 366
           D   I F SD  G + +++M ++GS+ + ++ +       P WSP    +     +T   
Sbjct: 104 DGKYIAFTSDENGGDNIWIMDADGSNPRAVTDETFRLLNSPAWSPDSQYLVARKHYTGSR 163

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDT 414
           S     + +    G +   L E  N Q     P +SP GR + FS+            ++
Sbjct: 164 SLGAGEVWLYHIAGGEGIKLTERPNEQKDLGEPAYSPDGRYIYFSQDATPGKTFHYSKNS 223

Query: 415 GSKLYSI----DLNGRNETLINTPAYASDPQ 441
              +Y I       G  E L+     A  P 
Sbjct: 224 VKGIYKIKRYDTETGDIEVLVQGTGGAIRPT 254



 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 97/251 (38%), Gaps = 31/251 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +      +        SPN + + +      DI ++ +         K +    +  + 
Sbjct: 45  EQVKIDVSEGTWMNISVSPNGKTIVF--DMLGDIYQIPMQ----GGEAKVLAKGIAWQMQ 98

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV---- 317
           P +S +GK    +  ++   +I+ +D   +    +T+  F +  S ++SPDS  +V    
Sbjct: 99  PTYSPDGKYIAFTSDENGGDNIWIMDADGSNPRAVTDETFRLLNSPAWSPDSQYLVARKH 158

Query: 318 FESDRE-GKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFT---------- 364
           +   R  G  ++++    G +  +++   +++    +P +SP G  I F+          
Sbjct: 159 YTGSRSLGAGEVWLYHIAGGEGIKLTERPNEQKDLGEPAYSPDGRYIYFSQDATPGKTFH 218

Query: 365 ---KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                    + I     +     +LV+       PT SP G  L + ++      S LY 
Sbjct: 219 YSKNSVKGIYKIKRYDTETGDIEVLVQGTGGAIRPTPSPDGTKLAYIKRDG--FQSSLYL 276

Query: 421 IDL-NGRNETL 430
           +DL +G+ E L
Sbjct: 277 LDLKSGKKEKL 287



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/327 (14%), Positives = 114/327 (34%), Gaps = 42/327 (12%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           +  +      A W+  A T +      I   +G + +  +  +   +   +   +  +  
Sbjct: 22  MASESTSDKAAKWQVNAPTNAPFEQVKIDVSEGTWMNISVSPNGKTIVFDMLGDIYQIPM 81

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            G   + L         +P +SP+ + +A+ + D+     +++MD               
Sbjct: 82  QGGEAKVLAKG-IAWQMQPTYSPDGKYIAFTS-DENGGDNIWIMDADGSNPRAVTDETFR 139

Query: 259 MILAPRFSSNGKRAL----ISVQKD-EAMDIYSVDLQSNATERLTNTLFIN---ISASYS 310
           ++ +P +S + +  +     +  +   A +++   +      +LT            +YS
Sbjct: 140 LLNSPAWSPDSQYLVARKHYTGSRSLGAGEVWLYHIAGGEGIKLTERPNEQKDLGEPAYS 199

Query: 311 PDSSQIVFESDRE-------------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           PD   I F  D               G  ++    +   D + + Q    +   P  SP 
Sbjct: 200 PDGRYIYFSQDATPGKTFHYSKNSVKGIYKIKRYDTETGDIEVLVQGTGGAIR-PTPSPD 258

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQA--------P--TWSPSGRSLI 405
           G  +A+ K  G + ++ ++     ++  L    D ++Q         P  +W+   + ++
Sbjct: 259 GTKLAYIKRDGFQSSLYLLDLKSGKKEKLYGKLDRDMQETWAIHGVYPTMSWTSDNQEIV 318

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLIN 432
           F        G K+  ID+  ++   I 
Sbjct: 319 FWA------GGKINKIDVESKSVKQIP 339



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 79/208 (37%), Gaps = 17/208 (8%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +L   + SP+ +KV Y       I  +     +  R  K     R   L P++S + + 
Sbjct: 366 NMLRMAQVSPDGKKVVYEALGKLWIKSLSNKSDKHSRLTKLDSELR--ELYPQWSRDSRS 423

Query: 272 ALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG------ 324
            + +   D+    +  V +++  ++ LT      +  ++SPD S +V+   + G      
Sbjct: 424 VVFTTWDDQQQGTVKVVSVRNKRSKTLTKEPGKYVEPTFSPDGSFVVYRKAKGGYITPKT 483

Query: 325 ---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 LY +   G    RI+ D     + P +    + + F    GE      +  DG 
Sbjct: 484 WSQNTGLYKVDIQGKQNTRITPDG----YQPQFGADSERVYFMDQ-GETPEFASINLDGF 538

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           Q+R+            SP G+ L F+ +
Sbjct: 539 QKRVHYTSKLGTEFRISPDGKQLAFAER 566



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 75/401 (18%), Positives = 143/401 (35%), Gaps = 71/401 (17%)

Query: 99  RFQDWNSLGAQVLV-----TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
               W S  +Q LV     TG     G      E  L+ +   +   G K    P   + 
Sbjct: 142 NSPAW-SPDSQYLVARKHYTGS-RSLGAG----EVWLYHIAGGE---GIKLTERPNEQKD 192

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           +         + I   +     +    S++ V GI K  +   D +  +I  L       
Sbjct: 193 LGEPAYSPDGRYIYFSQDATPGKTFHYSKNSVKGIYK--IKRYDTETGDIEVLVQGTGGA 250

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR----------SMILAP 263
           +  P  SP+  K+AY   D      +YL+D +  +  K  G              +    
Sbjct: 251 I-RPTPSPDGTKLAYIKRD-GFQSSLYLLDLKSGKKEKLYGKLDRDMQETWAIHGVYPTM 308

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASY------------ 309
            ++S+ +  +          I  +D++S + +++  ++     +  +             
Sbjct: 309 SWTSDNQEIVFWA----GGKINKIDVESKSVKQIPFSVKTELAVQPAVRFKQDLDKDVFD 364

Query: 310 ---------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGD 359
                    SPD  ++V+E+   GK  +  + +      R+++ D E     P WS    
Sbjct: 365 VNMLRMAQVSPDGKKVVYEA--LGKLWIKSLSNKSDKHSRLTKLDSELRELYPQWSRDSR 422

Query: 360 LIAFTKFSGEKFA-IGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG----- 412
            + FT +  ++   + V+     + + L  E      PT+SP G  +++ + K G     
Sbjct: 423 SVVFTTWDDQQQGTVKVVSVRNKRSKTLTKEPGKYVEPTFSPDGSFVVYRKAKGGYITPK 482

Query: 413 --DTGSKLYSIDLNGRNETLIN----TPAYASDPQWVGFMD 447
                + LY +D+ G+  T I      P + +D + V FMD
Sbjct: 483 TWSQNTGLYKVDIQGKQNTRITPDGYQPQFGADSERVYFMD 523



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 115/338 (34%), Gaps = 57/338 (16%)

Query: 158 ISDDIYQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQI 213
           ++D+ ++ +       +S+ L      +    +    + +    G     LT  P+  + 
Sbjct: 133 VTDETFRLLNSPAWSPDSQYLVARKHYTGSRSLGAGEVWLYHIAGGEGIKLTERPNEQKD 192

Query: 214 LFEPRFSPNQQKVA------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           L EP +SP+ + +             Y+    + I ++   DT      + +       +
Sbjct: 193 LGEPAYSPDGRYIYFSQDATPGKTFHYSKNSVKGIYKIKRYDTETGD-IEVLVQGTGGAI 251

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-----------ASYS 310
            P  S +G +     +      +Y +DL+S   E+L   L  ++             S++
Sbjct: 252 RPTPSPDGTKLAYIKRDGFQSSLYLLDLKSGKKEKLYGKLDRDMQETWAIHGVYPTMSWT 311

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP------------------ 352
            D+ +IVF +      ++  +       K+I    +                        
Sbjct: 312 SDNQEIVFWA----GGKINKIDVESKSVKQIPFSVKTELAVQPAVRFKQDLDKDVFDVNM 367

Query: 353 ----VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIF 406
                 SP G  + +    G+ +   +  K     RL   DS L+   P WS   RS++F
Sbjct: 368 LRMAQVSPDGKKVVYEAL-GKLWIKSLSNKSDKHSRLTKLDSELRELYPQWSRDSRSVVF 426

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +   D   G+       N R++TL   P    +P +  
Sbjct: 427 TTWDDQQQGTVKVVSVRNKRSKTLTKEPGKYVEPTFSP 464



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 55/129 (42%), Gaps = 10/129 (7%)

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD+  K Q+    +   +Q +I    E ++ +   SP G  I F         I  +  
Sbjct: 27  TSDKAAKWQVNAPTNAPFEQVKI-DVSEGTWMNISVSPNGKTIVFDMLGD----IYQIPM 81

Query: 379 DGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY- 436
            G + ++L +    Q  PT+SP G+ + F+  ++G  G  ++ +D +G N   +    + 
Sbjct: 82  QGGEAKVLAKGIAWQMQPTYSPDGKYIAFTSDENG--GDNIWIMDADGSNPRAVTDETFR 139

Query: 437 -ASDPQWVG 444
             + P W  
Sbjct: 140 LLNSPAWSP 148



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 91/244 (37%), Gaps = 41/244 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------------ 265
            ++ + Q++ +  +    I ++ +    + + P  +    ++  A RF            
Sbjct: 309 SWTSDNQEIVF--WAGGKINKIDVESKSVKQIPFSVKTELAVQPAVRFKQDLDKDVFDVN 366

Query: 266 -------SSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQI 316
                  S +GK+ +   +    + I S+  +S+   RLT  ++    +   +S DS  +
Sbjct: 367 MLRMAQVSPDGKKVVY--EALGKLWIKSLSNKSDKHSRLTKLDSELRELYPQWSRDSRSV 424

Query: 317 VFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------ 369
           VF + D + +  + V+       K ++++    Y +P +SP G  + + K  G       
Sbjct: 425 VFTTWDDQQQGTVKVVSVRNKRSKTLTKE-PGKYVEPTFSPDGSFVVYRKAKGGYITPKT 483

Query: 370 ---KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +  +   G Q   +  D     P +      + F    D     +  SI+L+G 
Sbjct: 484 WSQNTGLYKVDIQGKQNTRITPDGYQ--PQFGADSERVYFM---DQGETPEFASINLDGF 538

Query: 427 NETL 430
            + +
Sbjct: 539 QKRV 542



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 82/258 (31%), Gaps = 68/258 (26%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V  +      + ++ V+       + LT    + + EP FSP+   V Y           
Sbjct: 424 VVFTTWDDQQQGTVKVVSVRNKRSKTLTKEPGKYV-EPTFSPDGSFVVY----------- 471

Query: 240 YLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
                            +   + P  +S             +   +Y VD+Q     R+T
Sbjct: 472 --------------RKAKGGYITPKTWS-------------QNTGLYKVDIQGKQNTRIT 504

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              +      +  DS ++ F  D+    +   +  +G  ++     K  + F    SP G
Sbjct: 505 PDGY---QPQFGADSERVYFM-DQGETPEFASINLDGFQKRVHYTSKLGTEF--RISPDG 558

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------------TWSPSGRSLIF 406
             +AF     E+F + V       E + +       P            +W+ +   L +
Sbjct: 559 KQLAFA----ERFKVWVTPFAKHGETIEIGPKASNLPVSQLSVRAGESISWNGNSDQLYW 614

Query: 407 SRKKDGDTGSKLYSIDLN 424
           +       G +LY + ++
Sbjct: 615 T------LGPELYQMSVD 626


>gi|302866980|ref|YP_003835617.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Micromonospora aurantiaca ATCC 27029]
 gi|315506582|ref|YP_004085469.1| peptidase s9b dipeptidylpeptidase iv domain protein [Micromonospora
           sp. L5]
 gi|302569839|gb|ADL46041.1| peptidase S9B dipeptidylpeptidase IV domain protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|315413201|gb|ADU11318.1| peptidase S9B dipeptidylpeptidase IV domain protein [Micromonospora
           sp. L5]
          Length = 590

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 97/248 (39%), Gaps = 9/248 (3%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG   +  +   ++    P +SP+ + VAY         R +L+ +    AP+R+    
Sbjct: 104 SDGQTRQLTSAGHEE--EYPSWSPDGRTVAYV--GGPWGRRHFLVVSADGGAPRRVTTEP 159

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               A  ++ +G+  +       A  ++ +D ++     +T+    +   +  P    + 
Sbjct: 160 GRAGACSWAPDGRWLVCHSYDTGAGAVWLLDSRTGEAIPVTDGSSWDYKPTICPTRPAVA 219

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F    EG+  ++V +      + +     A    P W+  G+ + F +   E   I V  
Sbjct: 220 FSRSDEGRSVIWVQRLADGVGRPLVVTG-ADDRWPTWTRDGNHLFFHRLVDEGAGIAVWD 278

Query: 378 KDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           +     R LV  +   +  +++P GR +++  + DG +  ++  +DL       +     
Sbjct: 279 RRTKAVRELVPAEEKPRYASFAPDGRRIVYGTEADGRSALRI--LDLATGVSQPVP-AGE 335

Query: 437 ASDPQWVG 444
           A+ P W  
Sbjct: 336 AAFPSWSP 343



 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 87/226 (38%), Gaps = 5/226 (2%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  +   A+      + ++  D R  +  ++        +  ++S + ++   +  
Sbjct: 34  AISPDGTRFV-ASSKRNGSVNLWFFDLRTGK-WQQGTWGTGDDIEAQWSPDNEQLAFTSS 91

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +     I+   L    T +LT+        S+SPD   + +     G+    V+ ++G  
Sbjct: 92  RGGHKAIWLYRLSDGQTRQLTSAGHEEEYPSWSPDGRTVAYVGGPWGRRHFLVVSADGGA 151

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PT 396
            +R++ +         W+P G  +    +     A+ ++     +   + + S+    PT
Sbjct: 152 PRRVTTE-PGRAGACSWAPDGRWLVCHSYDTGAGAVWLLDSRTGEAIPVTDGSSWDYKPT 210

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             P+  ++ FSR  +G +   +  +  +G    L+ T A    P W
Sbjct: 211 ICPTRPAVAFSRSDEGRSVIWVQRL-ADGVGRPLVVTGADDRWPTW 255



 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 97/261 (37%), Gaps = 14/261 (5%)

Query: 185 VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            S   ++ + V    DG     +    D     P ++ +   + +    DE    + + D
Sbjct: 222 RSDEGRSVIWVQRLADGVGRPLVVTGAD--DRWPTWTRDGNHLFFHRLVDEGA-GIAVWD 278

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R     + +        A  F+ +G+R +   + D    +  +DL +  ++ +      
Sbjct: 279 RRTKAVRELVPAEEKPRYA-SFAPDGRRIVYGTEADGRSALRILDLATGVSQPVPAGEA- 336

Query: 304 NISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKE---ASYFDPVWSPQG 358
               S+SPD   I      D   + ++  +   G   +  + D++     +    ++P G
Sbjct: 337 -AFPSWSPDGRTIACALRPDPTSRWEIATVDVAGGQPRVWTADRDDLRGLHAPVSFAPDG 395

Query: 359 DLIAFTK-FSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGS 416
             + F       +  + V+  D  +   L EDS   +AP ++P GR ++F   + G+   
Sbjct: 396 RRLVFRSETEPFEANLLVLDLDSGRITNLTEDSWWDEAPAFTPDGRGVVFMSTRGGNWTW 455

Query: 417 KLYSIDLNGRNETLINTPAYA 437
             Y IDL+      +  P Y 
Sbjct: 456 GFYRIDLDSGELLTLAGPDYV 476



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 76/202 (37%), Gaps = 8/202 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKR 271
            P +SP+ + +A A   D                P+       + R +     F+ +G+R
Sbjct: 338 FPSWSPDGRTIACALRPDPTSRWEIATVDVAGGQPRVWTADRDDLRGLHAPVSFAPDGRR 397

Query: 272 ALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--EQL 328
            +  S  +    ++  +DL S     LT   + + + +++PD   +VF S R G      
Sbjct: 398 LVFRSETEPFEANLLVLDLDSGRITNLTEDSWWDEAPAFTPDGRGVVFMSTRGGNWTWGF 457

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y +  +  +   ++        +P  +  G  I  T  + +   +     DG+   +   
Sbjct: 458 YRIDLDSGELLTLAGPDYVERNNPRSTADGR-ILSTMVASKVEELYEQLPDGTGRVVTEA 516

Query: 389 DSNLQAPTWSPSGRSLIFSRKK 410
              ++ P  S  G  ++F+R +
Sbjct: 517 GPGVRYPVPSADGEQVLFTRTR 538



 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 55/152 (36%), Gaps = 3/152 (1%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              L      +   + SPD ++ V  S R G   L+         ++ +        +  
Sbjct: 20  LRLLAADPNGSGDGAISPDGTRFVASSKRNGSVNLWFFDLRTGKWQQGTWGT-GDDIEAQ 78

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
           WSP  + +AFT   G   AI + +    Q R L    + +  P+WSP GR++ +     G
Sbjct: 79  WSPDNEQLAFTSSRGGHKAIWLYRLSDGQTRQLTSAGHEEEYPSWSPDGRTVAYVGGPWG 138

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                + S D  G    +   P  A    W  
Sbjct: 139 RRHFLVVSADG-GAPRRVTTEPGRAGACSWAP 169


>gi|320107875|ref|YP_004183465.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319926396|gb|ADV83471.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
          Length = 729

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 56/275 (20%), Positives = 99/275 (36%), Gaps = 18/275 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI FV            +  M  DG +++ LT     +     ++ +   + +A+     
Sbjct: 346 RIAFVRYISHGAG---EIFTMAADGTDLKQLTTDHRNVRGV-DWASDGWHLIFASNRRGS 401

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--- 292
                +   R     + + +  +    P  S  G         DE  +I+ V +Q+    
Sbjct: 402 YELREI--DRNGGESQPLPSDTASASEPAISRIGNWMAFVES-DENWNIWRVPIQNGHIG 458

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           + +R   +   N S S+SPD   I F SDR G  +++    +GS  ++++          
Sbjct: 459 SPKRFLASQGHNHSPSFSPDGRTIAFVSDRSGTPEIWFANEDGSSLRQMTHFGGPWLGTI 518

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKD 411
            WSP    + F         I  M   G +  L   E   ++ P WS  GRS+ F   + 
Sbjct: 519 RWSPDNKAVVFDARPNGNSEIFTMSASGGKPTLFEHEQFEVRRPGWSRDGRSVYFDTTRA 578

Query: 412 GDTGSKLYSIDLNGRNETLIN-----TPAYASDPQ 441
           G    +++   L       I       P+ + D Q
Sbjct: 579 G--MPQIWKRTLATGATRPIAPKDTLYPSESMDGQ 611



 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 64/297 (21%), Positives = 124/297 (41%), Gaps = 31/297 (10%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI--LFEPRFSPNQQKVAYATYDDED 235
            FV  + ++G    SL    +  A+   + P  ++I   F P  +P+  +VAY    + D
Sbjct: 148 AFVVLTALAGSSLISLHRSVQAKADSFDIVPFSNEIGQQFSPSIAPDGTRVAYVWDGNAD 207

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +Y+ D +      R+ + +   + P +S +G+      +     +++       A  
Sbjct: 208 NYDIYIKDLKTSGVV-RLTDDKQPDIHPAWSPDGREVAFLRRSPSGTEVFVKSAGGGAEH 266

Query: 296 RL-----TNTLFIN-------ISASYSPDSSQIVFESDREGKE---QLYVMQSNGSDQKR 340
            +     T+ L+ +        S +++PD  Q++   D  GK+    L ++  +   +K 
Sbjct: 267 PVGAIRDTSGLWASENPFSGCQSPTWTPDGRQLLLT-DGLGKDYGAGLVLLSVDSGTEKP 325

Query: 341 ISQDKEAS-YFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLVED-SNLQAPTW 397
           ++  +       P +S  G  IAF ++ S     I  M  DG+  + L  D  N++   W
Sbjct: 326 LTSPRPQDEDCYPRFSQDGKRIAFVRYISHGAGEIFTMAADGTDLKQLTTDHRNVRGVDW 385

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQ------WVGFMD 447
           +  G  LIF+  + G    +L  ID NG     + +  A AS+P       W+ F++
Sbjct: 386 ASDGWHLIFASNRRGS--YELREIDRNGGESQPLPSDTASASEPAISRIGNWMAFVE 440



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 85/245 (34%), Gaps = 20/245 (8%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRA 272
              P FSP+ + +A+ +                  + +++ +F    L   R+S + K  
Sbjct: 470 NHSPSFSPDGRTIAFVSDRSGTPE--IWFANEDGSSLRQMTHFGGPWLGTIRWSPDNKAV 527

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +   + +   +I+++           +  F      +S D   + F++ R G  Q++   
Sbjct: 528 VFDARPNGNSEIFTMSASGGKPTLFEHEQFEVRRPGWSRDGRSVYFDTTRAGMPQIWKRT 587

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLL--VED 389
                 + I+         P  S  G  + F   +G  + ++   + DG+  + +  V  
Sbjct: 588 LATGATRPIAPK---DTLYPSESMDGQTLFFFSGNGRGEHSLWSERTDGNDLKQIPGVHP 644

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS-----IDLNGRNETLIN--TPAYA--SDP 440
           +       S  G  + F+           YS     I   G+    ++  TP+     D 
Sbjct: 645 NPDLDWAVSKDG--IYFAMGDAVSARLNFYSFRDGRITSAGKLTQALSLGTPSLVVSPDG 702

Query: 441 QWVGF 445
           +W+ +
Sbjct: 703 KWLLY 707



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 78/246 (31%), Gaps = 55/246 (22%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I FVS+   +      +   + DG+++R +T      L   R+SP+ + V +    + + 
Sbjct: 482 IAFVSDRSGTP----EIWFANEDGSSLRQMTHFGGPWLGTIRWSPDNKAVVFDARPNGNS 537

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
               +  +     P    + +  +  P +S +G+       +     I+   L + AT  
Sbjct: 538 EIFTM--SASGGKPTLFEHEQFEVRRPGWSRDGRSVYFDTTRAGMPQIWKRTLATGATRP 595

Query: 297 LTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRI-------------- 341
           +       +  S S D   + F S    G+  L+  +++G+D K+I              
Sbjct: 596 I--APKDTLYPSESMDGQTLFFFSGNGRGEHSLWSERTDGNDLKQIPGVHPNPDLDWAVS 653

Query: 342 --------------------------------SQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                                           +Q         V SP G  + +      
Sbjct: 654 KDGIYFAMGDAVSARLNFYSFRDGRITSAGKLTQALSLGTPSLVVSPDGKWLLYACIDST 713

Query: 370 KFAIGV 375
           K  I +
Sbjct: 714 KSDIKI 719


>gi|254442939|ref|ZP_05056415.1| hypothetical protein VDG1235_1173 [Verrucomicrobiae bacterium
           DG1235]
 gi|198257247|gb|EDY81555.1| hypothetical protein VDG1235_1173 [Verrucomicrobiae bacterium
           DG1235]
          Length = 469

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 91/215 (42%), Gaps = 18/215 (8%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R+       +  +   +++ T + +    +Y +  R    P+++   +       +S + 
Sbjct: 253 RNNNDHVLNWGADMIAISHHTEEHDGKSIIYKLPVR-GGIPEQLT-LQGPSFLHGWSPDN 310

Query: 270 KRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           K  + + ++    +I+         E +LT++  ++  + YSPD   I F S R G  Q+
Sbjct: 311 KYVIYTAERGGKWNIWRTTTDGKGEEAQLTDSPGLSDGSEYSPDGKYIYFNSTRSGLMQI 370

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----------KFAIGVMKK 378
           + M+++GS+ ++++ D+  ++F P  SP G  + F  +  +             +  M  
Sbjct: 371 WRMKADGSEPEQVTDDQYNNWF-PHLSPDGKTLVFLSYGQDVEPANHPYYKHVFLRTMPV 429

Query: 379 DGSQERLLV----EDSNLQAPTWSPSGRSLIFSRK 409
            G   R++         +  P+WSP GR + F   
Sbjct: 430 SGGAPRIVAYLYGGQGTINVPSWSPDGRKVAFVSH 464



 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 97/260 (37%), Gaps = 27/260 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMI 260
           R +  S  + +  P ++P+ + + Y +       R+Y        + +    F    +  
Sbjct: 203 REIVYSTKEGIEAPNWTPDGKTLIYNS-----GGRLYRFGLASGVSAEMDTGFGIRNNND 257

Query: 261 LAPRFSSNGKRALISV---QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               + ++     IS    + D    IY + ++    E+LT     +    +SPD+  ++
Sbjct: 258 HVLNWGAD--MIAISHHTEEHDGKSIIYKLPVRGGIPEQLT-LQGPSFLHGWSPDNKYVI 314

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           + ++R GK  ++   ++G  ++    D         +SP G  I F         I  MK
Sbjct: 315 YTAERGGKWNIWRTTTDGKGEEAQLTDSPGLSDGSEYSPDGKYIYFNSTRSGLMQIWRMK 374

Query: 378 KDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSK--------LYSIDLNGRNE 428
            DGS+   + +D  N   P  SP G++L+F         +         L ++ ++G   
Sbjct: 375 ADGSEPEQVTDDQYNNWFPHLSPDGKTLVFLSYGQDVEPANHPYYKHVFLRTMPVSGGAP 434

Query: 429 TLI----NTPAYASDPQWVG 444
            ++          + P W  
Sbjct: 435 RIVAYLYGGQGTINVPSWSP 454



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 74/207 (35%), Gaps = 15/207 (7%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + + ++ +S        K+ +  +   G     LT      L    +SP+ + V Y    
Sbjct: 262 WGADMIAISHHTEEHDGKSIIYKLPVRGGIPEQLTLQGPSFLHG--WSPDNKYVIYTAER 319

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 ++   T       ++ +   +     +S +GK    +  +   M I+ +    +
Sbjct: 320 GGK-WNIWRTTTDGKGEEAQLTDSPGLSDGSEYSPDGKYIYFNSTRSGLMQIWRMKADGS 378

Query: 293 ATERLTNTLFINISASYSPDSSQIVFES---DREGKEQLY-------VMQSNGSDQKRIS 342
             E++T+  + N     SPD   +VF S   D E     Y        M  +G   + ++
Sbjct: 379 EPEQVTDDQYNNWFPHLSPDGKTLVFLSYGQDVEPANHPYYKHVFLRTMPVSGGAPRIVA 438

Query: 343 --QDKEASYFDPVWSPQGDLIAFTKFS 367
                + +   P WSP G  +AF   +
Sbjct: 439 YLYGGQGTINVPSWSPDGRKVAFVSHT 465


>gi|115377195|ref|ZP_01464407.1| peptidase M28 [Stigmatella aurantiaca DW4/3-1]
 gi|310821212|ref|YP_003953570.1| peptidase m28 [Stigmatella aurantiaca DW4/3-1]
 gi|115365778|gb|EAU64801.1| peptidase M28 [Stigmatella aurantiaca DW4/3-1]
 gi|309394284|gb|ADO71743.1| Peptidase M28 [Stigmatella aurantiaca DW4/3-1]
          Length = 927

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 66/299 (22%), Positives = 113/299 (37%), Gaps = 38/299 (12%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK-VA 227
           ++    +   F    V SG    +          + Y +         P+  P++     
Sbjct: 76  DRIFRMTVEPFSETQVSSGKGATTCAHFLPGDQELIYASTHLGGDACPPK--PDRSMGYV 133

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +A YD  D+ +     + + R  +  G      +  +   +G   + +  +D  +D+Y +
Sbjct: 134 WALYDSYDVFKANADGSGVTRLTETPGYDAEGTVCAK---DG-SIIFTSTRDGDIDLYRM 189

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESD--------------------REGKEQ 327
           D       RLTNT   +  A ++ D S+IV+ +                     R  K +
Sbjct: 190 DKDGGNVRRLTNTPGYDGGAFFNADCSKIVWRASRPRPGKELEDYQGLLARGLVRPSKLE 249

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKKDGSQ- 382
           LYV  ++GS+ K+I+    A+ F P + P G  I F+       G +F I  +  DGS  
Sbjct: 250 LYVANADGSEAKQITWL-NAASFAPFFHPNGQRILFSSNYGDPKGREFDIWAVNVDGSNL 308

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKK-----DGDTGSKLYSIDLNGRNETLINTPAY 436
           ER+         P +SP G+ L FS  +      GDT   L     +    T + T A 
Sbjct: 309 ERITTAPGFDGFPMFSPDGKWLAFSSNRATAPGQGDTNVFLARWVEDAAPVTSVQTAAD 367



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 102/295 (34%), Gaps = 53/295 (17%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A++R LT   +       +S + +++++     +         T    +  ++ + +   
Sbjct: 41  ADLRQLTFGGENAEAY--WSFDGKQLSFQANRGDMGCDRIFRMTVEPFSETQVSSGKGAT 98

Query: 261 LAPRFSSNGKRALISVQKDEA--------------------MDIYSVDLQSNATERLTNT 300
               F    +  + +                           D++  +   +   RLT T
Sbjct: 99  TCAHFLPGDQELIYASTHLGGDACPPKPDRSMGYVWALYDSYDVFKANADGSGVTRLTET 158

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              +   +       I+F S R+G   LY M  +G + +R++ +         ++     
Sbjct: 159 PGYDAEGTVCAKDGSIIFTSTRDGDIDLYRMDKDGGNVRRLT-NTPGYDGGAFFNADCSK 217

Query: 361 IAFTKFSGE--------------------KFAIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
           I +                          K  + V   DGS+ + +   ++   AP + P
Sbjct: 218 IVWRASRPRPGKELEDYQGLLARGLVRPSKLELYVANADGSEAKQITWLNAASFAPFFHP 277

Query: 400 SGRSLIFSRKKDGDTGSK--LYSIDLNGRNETLINT-------PAYASDPQWVGF 445
           +G+ ++FS       G +  +++++++G N   I T       P ++ D +W+ F
Sbjct: 278 NGQRILFSSNYGDPKGREFDIWAVNVDGSNLERITTAPGFDGFPMFSPDGKWLAF 332


>gi|116619169|ref|YP_821325.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222331|gb|ABJ81040.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 877

 Score =  133 bits (334), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 67/319 (21%), Positives = 118/319 (36%), Gaps = 28/319 (8%)

Query: 152 RKIAHTISDDIYQSITGEKGD-FNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPS 209
           R++       IY + T      ++    F++ S        S+ V  R+ G   R+ +  
Sbjct: 419 RRLVQFPRGSIYGNPTARSSISWSPDGRFLAFSGTEDDNPPSIWVASRESGEAHRFSSTP 478

Query: 210 RDQI-LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP----KRIGNFRSMILAPR 264
           R  +    P FSP+   +AY    D     V L +      P    +   ++   I    
Sbjct: 479 RGYLSDSSPAFSPDGHTIAYVRARDTFSRAVVLQEIHAGGTPQGKEREATSYDKTIQELA 538

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +  +G+  ++SV++              A   L     I    S S    ++ +E  R  
Sbjct: 539 WQPDGRGLILSVRQGGEHAALLRLTLDGAMHPLGIDNGIVRWPSLSRTGRRMAYE-KRHI 597

Query: 325 KEQLYVM--QSNGSDQKRISQDKEASYFD-------PVWSPQGDLIAFTKFSGEKFAIGV 375
              +Y M   S     +   Q   A+  D       P+ SP G  + F       + I V
Sbjct: 598 DTNIYRMEGPSADGGARPFDQLGVAAVVDSTALDREPMLSPDGRRMVFNSDRSGSYEIYV 657

Query: 376 MKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              DG+ +  L       L +P WSP G++++F R ++G   S +Y+I+  G     + +
Sbjct: 658 ANADGTDQVALTAMGLTALGSPRWSPDGQTVVFDRYENGH--SMIYTINAGGGKPRRVTS 715

Query: 434 -------PAYASDPQWVGF 445
                  P+Y+ D  W+ F
Sbjct: 716 EEFRDIRPSYSHDGAWIYF 734



 Score =  128 bits (322), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 100/232 (43%), Gaps = 16/232 (6%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
               +  EP  SP+ +++ + + D      +Y+ +              + + +PR+S +
Sbjct: 626 DSTALDREPMLSPDGRRMVFNS-DRSGSYEIYVANADGTDQVALTAMGLTALGSPRWSPD 684

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+  +    ++    IY+++       R+T+  F +I  SYS D + I F S+R G+ ++
Sbjct: 685 GQTVVFDRYENGHSMIYTINAGGGKPRRVTSEEFRDIRPSYSHDGAWIYFASNRSGRLEI 744

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           + +   G   ++I+ +     F+   SP G L+ +    G    +  M  +G +  L++ 
Sbjct: 745 WKVPPGGGKPQQITHNFGTEPFE---SPDGRLLYYMNDQG----LWSMPVEGGEPTLVLP 797

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASD 439
           ++ +    ++ +GRS+ +           L+ +  + GR       P   SD
Sbjct: 798 EAVMY--RYALAGRSIYYFAD-----ARSLWVLRTDTGRKFEYARFPRDVSD 842



 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 52/296 (17%), Positives = 96/296 (32%), Gaps = 23/296 (7%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +S       + + +        +G    +   +            +   + +EP  SP+ 
Sbjct: 292 ESPRRLGWYWTAALAVGLAIGAAGGWWWARRGVAASMWGPVRPLTTYSGLEYEPALSPDG 351

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++VA+A   D        +      AP R+    +   +P +S +G +     Q      
Sbjct: 352 KQVAFAWDGDGKDNFNIYVRLVDGGAPLRLTTDAAADHSPSWSPDGSQVAFLRQN----A 407

Query: 284 IYSVDLQSNATERLTNTL--FINISA------SYSPDSSQIVFESDREGK-EQLYVMQSN 334
           ++ V        RL       I  +       S+SPD   + F    +     ++V    
Sbjct: 408 VFLVPSLGGVERRLVQFPRGSIYGNPTARSSISWSPDGRFLAFSGTEDDNPPSIWVASRE 467

Query: 335 GSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-------KDGSQERL 385
             +  R   +     S   P +SP G  IA+ +         V++         G +   
Sbjct: 468 SGEAHRFSSTPRGYLSDSSPAFSPDGHTIAYVRARDTFSRAVVLQEIHAGGTPQGKEREA 527

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              D  +Q   W P GR LI S ++ G+  + L  + L+G    L         P 
Sbjct: 528 TSYDKTIQELAWQPDGRGLILSVRQGGEHAALL-RLTLDGAMHPLGIDNGIVRWPS 582



 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 99/251 (39%), Gaps = 26/251 (10%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R++F S+   S      + V + DG +   LT      L  PR+SP+ Q V +  Y++  
Sbjct: 642 RMVFNSDRSGS----YEIYVANADGTDQVALTAMGLTALGSPRWSPDGQTVVFDRYENGH 697

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            + +Y ++      P+R+ +     + P +S +G     +  +   ++I+ V       +
Sbjct: 698 SM-IYTINAG-GGKPRRVTSEEFRDIRPSYSHDGAWIYFASNRSGRLEIWKVPPGGGKPQ 755

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++T+          SPD   + + +D+     L+ M   G +   +  +     +     
Sbjct: 756 QITHNFG--TEPFESPDGRLLYYMNDQG----LWSMPVEGGEPTLVLPEAVMYRYALA-- 807

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQ-------ERLLVEDSNLQAPTWSPSGRSLIFSR 408
             G  I +     +  ++ V++ D  +        R + +       + S   R+++F++
Sbjct: 808 --GRSIYYFA---DARSLWVLRTDTGRKFEYARFPRDVSDFGTGTLFSVSADERTILFAQ 862

Query: 409 KKDGDTGSKLY 419
               ++  KL 
Sbjct: 863 TDRQESDLKLV 873



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 53/332 (15%), Positives = 107/332 (32%), Gaps = 80/332 (24%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G    ++ V   DG     LT         P +SP+  +VA+   +      V+L+ +
Sbjct: 360 GDGKDNFNIYVRLVDGGAPLRLTTD-AAADHSPSWSPDGSQVAFLRQNA-----VFLVPS 413

Query: 245 RIDRAPKRIGNFRSMI-------LAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATER 296
                 + +   R  I        +  +S +G+    S  +D+    I+    +S    R
Sbjct: 414 LGGVERRLVQFPRGSIYGNPTARSSISWSPDGRFLAFSGTEDDNPPSIWVASRESGEAHR 473

Query: 297 LTNTL---FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP- 352
            ++T      + S ++SPD   I +   R+   +  V+Q   +      +++EA+ +D  
Sbjct: 474 FSSTPRGYLSDSSPAFSPDGHTIAYVRARDTFSRAVVLQEIHAGGTPQGKEREATSYDKT 533

Query: 353 ----VWSPQGDLIAFTKFSGEKF------------------------------------- 371
                W P G  +  +   G +                                      
Sbjct: 534 IQELAWQPDGRGLILSVRQGGEHAALLRLTLDGAMHPLGIDNGIVRWPSLSRTGRRMAYE 593

Query: 372 ------AIGVM---KKDGSQE--------RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                  I  M     DG            ++   +  + P  SP GR ++F+  + G  
Sbjct: 594 KRHIDTNIYRMEGPSADGGARPFDQLGVAAVVDSTALDREPMLSPDGRRMVFNSDRSGS- 652

Query: 415 GSKLYSIDLNGRNETLINTPA--YASDPQWVG 444
             ++Y  + +G ++  +          P+W  
Sbjct: 653 -YEIYVANADGTDQVALTAMGLTALGSPRWSP 683



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 21/66 (31%), Gaps = 1/66 (1%)

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYAS 438
           G    L         P  SP G+ + F+   DG     +Y   ++G     L    A   
Sbjct: 330 GPVRPLTTYSGLEYEPALSPDGKQVAFAWDGDGKDNFNIYVRLVDGGAPLRLTTDAAADH 389

Query: 439 DPQWVG 444
            P W  
Sbjct: 390 SPSWSP 395


>gi|322437622|ref|YP_004219712.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321165515|gb|ADW71218.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 621

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 90/278 (32%), Gaps = 32/278 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +M   G     LT ++        +SP+ + +AYA+  +        + +    APK
Sbjct: 60  QIVLMPASGGWPETLTSTQGGKNGL-AWSPDGRSIAYASNGN------IWLVSVSGGAPK 112

Query: 252 RIGNFR--------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           R+ N          S   AP +S +G+  L    +     I  V      T  LT     
Sbjct: 113 RLTNAPAGGGDPRQSADRAPSWSPDGRWILFESGRRGVNSIMVVSPDGAVTSFLTPPRLE 172

Query: 304 NISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKR---------ISQDKEASYF 350
             SA +SP   QIV+ +       G+ +     +                + +    S  
Sbjct: 173 ATSAKFSPKGDQIVYTTRARDYFSGRLETLRFDTQSGQPAGKPTILYTAPVDRGGGWSIR 232

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRK 409
              WSP G  +     +     I  +   G   R + +       P +SP G+ + F   
Sbjct: 233 GADWSPDGKTLVTVLQNSGWEHIYTLPASGGAPRQITDGQFEDTDPIYSPDGKHIAFISS 292

Query: 410 KDGDTGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
           +       ++ +   G   T +     P   S  QW  
Sbjct: 293 RGLLEARNVFIMLATGGEPTQLAKFEVPGMVSQVQWSP 330



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 98/269 (36%), Gaps = 29/269 (10%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS-------RDQILFE 216
           +++T  +G  N          ++     ++ ++   G   + LT +       R      
Sbjct: 72  ETLTSTQGGKNGLAWSPDGRSIAYASNGNIWLVSVSGGAPKRLTNAPAGGGDPRQSADRA 131

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +SP+ + + + +      +   ++ +        +   R    + +FS  G + + + 
Sbjct: 132 PSWSPDGRWILFES--GRRGVNSIMVVSPDGAVTSFLTPPRLEATSAKFSPKGDQIVYTT 189

Query: 277 QK----DEAMDIYSVDLQSNATE---------RLTNTLFINI-SASYSPDSSQIVFESDR 322
           +        ++    D QS              +      +I  A +SPD   +V     
Sbjct: 190 RARDYFSGRLETLRFDTQSGQPAGKPTILYTAPVDRGGGWSIRGADWSPDGKTLVTVLQN 249

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDG 380
            G E +Y + ++G   ++I+ D +    DP++SP G  IAF    G  E   + +M   G
Sbjct: 250 SGWEHIYTLPASGGAPRQIT-DGQFEDTDPIYSPDGKHIAFISSRGLLEARNVFIMLATG 308

Query: 381 SQERLLVE---DSNLQAPTWSPSGRSLIF 406
            +   L +      +    WSP  R L F
Sbjct: 309 GEPTQLAKFEVPGMVSQVQWSPDSRKLYF 337



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 64/335 (19%), Positives = 106/335 (31%), Gaps = 44/335 (13%)

Query: 75  RSDVFNLISQDSF-KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
           R+    L+       + +T+         W+         GR I    +       L  V
Sbjct: 57  RAGQIVLMPASGGWPETLTSTQGGKNGLAWSP-------DGRSIAYASNG---NIWLVSV 106

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
                       +     R+ A               G +   ILF S         NS+
Sbjct: 107 SGGAPKRLTNAPAGGGDPRQSADRAPSW------SPDGRW---ILFESGRRG----VNSI 153

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V+  DGA   +LTP R +     +FSP   ++ Y T    D     L   R D    + 
Sbjct: 154 MVVSPDGAVTSFLTPPRLEATSA-KFSPKGDQIVYTT-RARDYFSGRLETLRFDTQSGQP 211

Query: 254 GNFRSM-------------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
               ++             I    +S +GK  +  +Q      IY++     A  ++T+ 
Sbjct: 212 AGKPTILYTAPVDRGGGWSIRGADWSPDGKTLVTVLQNSGWEHIYTLPASGGAPRQITDG 271

Query: 301 LFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQ 357
            F +    YSPD   I F S R       +++M + G +  +++  +         WSP 
Sbjct: 272 QFEDTDPIYSPDGKHIAFISSRGLLEARNVFIMLATGGEPTQLAKFEVPGMVSQVQWSPD 331

Query: 358 GDLIAFTKFSG-EKFAIGVMKK-DGSQERLLVEDS 390
              + F   S  E   + V      S    L   +
Sbjct: 332 SRKLYFNHLSPVETSNLLVQDLGSTSAPSYLTHTT 366



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 26/111 (23%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           D   S  G  +AF    G    I +M   G   E L           WSP GRS+ ++  
Sbjct: 43  DAAISLDGKTLAF----GRAGQIVLMPASGGWPETLTSTQGGKNGLAWSPDGRSIAYASN 98

Query: 410 KDGDTGSKLYSIDLNG-RNETLINTPAYASDP--------------QWVGF 445
                   ++ + ++G   + L N PA   DP              +W+ F
Sbjct: 99  ------GNIWLVSVSGGAPKRLTNAPAGGGDPRQSADRAPSWSPDGRWILF 143


>gi|24371617|ref|NP_715659.1| amidohydrolase [Shewanella oneidensis MR-1]
 gi|24345370|gb|AAN53104.1|AE015453_6 conserved hypothetical protein [Shewanella oneidensis MR-1]
          Length = 1049

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 85/237 (35%), Gaps = 26/237 (10%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A+A    +    V        +  K I       +    S +G+  +  +  D    IY
Sbjct: 8   IAHADEVQKPSWDVNAPTNAPLKKVK-IDVNEGTWMNLSVSPDGQHLVFDLLGD----IY 62

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            + +     + L   +   +   YSP+   I F SD +G + +++M ++GS+ + ++ + 
Sbjct: 63  QIPVTGGEAKPLAQGISWQMQPVYSPNGKHIAFTSDADGGDNIWIMNADGSNPRTVTSET 122

Query: 346 EASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ----APT 396
                 P WSP    +          S     + +    G +   L E  N +     P 
Sbjct: 123 FRLLNSPAWSPDSQYLIGRKHFTASRSLGAGEVWLYHVAGGEGVKLTERPNDEKDLGEPA 182

Query: 397 WSPSGRSLIFSRK--------KDGDTGSKLYSI----DLNGRNETLINTPAYASDPQ 441
           +SP GR + FS+            D+ + +Y I       G  E LI     A  P 
Sbjct: 183 YSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRYDTKTGNIEILIEGTGGAIRPT 239



 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 93/236 (39%), Gaps = 31/236 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ Q + +      DI ++ +         K +    S  + P +S NGK    +  
Sbjct: 45  SVSPDGQHLVF--DLLGDIYQIPV----TGGEAKPLAQGISWQMQPVYSPNGKHIAFTSD 98

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVM 331
            D   +I+ ++   +    +T+  F +  S ++SPDS  ++    F + R  G  ++++ 
Sbjct: 99  ADGGDNIWIMNADGSNPRTVTSETFRLLNSPAWSPDSQYLIGRKHFTASRSLGAGEVWLY 158

Query: 332 QSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVM 376
              G +  +++   + E    +P +SP G  I F++                  + I   
Sbjct: 159 HVAGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKIKRY 218

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
                   +L+E       PT SP G  L + ++   D  S LY +DL +G    L
Sbjct: 219 DTKTGNIEILIEGTGGAIRPTPSPDGTKLAYIKRD--DFQSSLYLLDLKSGETTKL 272



 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 88/270 (32%), Gaps = 36/270 (13%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +      +   +   +  +   G   + L         +P +SPN + +A+ 
Sbjct: 38  EGTWMNLSVSPDGQHLVFDLLGDIYQIPVTGGEAKPLAQGIS-WQMQPVYSPNGKHIAFT 96

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN-----GKRALISVQKDEAMDI 284
           + D +    +++M+               ++ +P +S +     G++   + +   A ++
Sbjct: 97  S-DADGGDNIWIMNADGSNPRTVTSETFRLLNSPAWSPDSQYLIGRKHFTASRSLGAGEV 155

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESD-------------REGKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 156 WLYHVAGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIYKI 215

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   + + I  +       P  SP G  +A+ K    + ++ ++     +   L  
Sbjct: 216 KRYDTKTGNIE-ILIEGTGGAIRPTPSPDGTKLAYIKRDDFQSSLYLLDLKSGETTKLFG 274

Query: 389 D------------SNLQAPTWSPSGRSLIF 406
           D                +  W+   + + F
Sbjct: 275 DLDRDMQETWAIHGVYPSMAWTQDNKDIFF 304



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 76/203 (37%), Gaps = 23/203 (11%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRALISVQ 277
           SP+  KVA+     E + +++L      +  +   +GN     L P++S +GK  + +  
Sbjct: 359 SPDGSKVAF-----EALGKIWLKSLPDGKMSRLTELGNDIG-ELYPQWSRDGKNIVFTTW 412

Query: 278 KD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQ 327
            D +   +  +  +    ++LT      +  +++P+   +V+   + G            
Sbjct: 413 NDQDQGAVQVISAKGGKAKQLTTEPGKYVEPTFAPNGELVVYRKTQGGNLTPRTWSQEPG 472

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLL 386
           +Y +        +I+ +   + F        + I F      +   +  +  DG  +R+ 
Sbjct: 473 IYKVDLKTKQNTKITAEGYQAQFGAS----AERIFFMNSGDDDTPQLASINLDGFDKRVH 528

Query: 387 VEDSNLQAPTWSPSGRSLIFSRK 409
               +      SP G  L F+ +
Sbjct: 529 YSSKHATEFRVSPDGEQLAFAER 551



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 58/300 (19%), Positives = 103/300 (34%), Gaps = 53/300 (17%)

Query: 192 SLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDED------------IL 237
            + +    G     LT  P+ ++ L EP +SP+ + + ++  D               I 
Sbjct: 154 EVWLYHVAGGEGVKLTERPNDEKDLGEPAYSPDGRYIYFSQDDTPGKTFHYSKDSVNGIY 213

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           ++   DT+       I      I  P  S +G +     + D    +Y +DL+S  T +L
Sbjct: 214 KIKRYDTKTGNIEILIEGTGGAIR-PTPSPDGTKLAYIKRDDFQSSLYLLDLKSGETTKL 272

Query: 298 TNTLFINI-----------SASYSPDSSQIVFESDREGKEQLYVMQ-------------S 333
              L  ++           S +++ D+  I F + +    +L V                
Sbjct: 273 FGDLDRDMQETWAIHGVYPSMAWTQDNKDIFFWA-KGKINRLNVANKTVTNVPFSVKTQL 331

Query: 334 NGSDQKRISQDKEASYFD------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +     R  QD +   FD         SP G  +AF         I +      +   L 
Sbjct: 332 DVQPSVRFKQDIDKDVFDVKMLRMAQVSPDGSKVAFEALG----KIWLKSLPDGKMSRLT 387

Query: 388 EDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           E  N      P WS  G++++F+   D D G+        G+ + L   P    +P +  
Sbjct: 388 ELGNDIGELYPQWSRDGKNIVFTTWNDQDQGAVQVISAKGGKAKQLTTEPGKYVEPTFAP 447



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 69/185 (37%), Gaps = 22/185 (11%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQ 315
           M+   + S +G +            I+   L      RLT  L  +I      +S D   
Sbjct: 352 MLRMAQVSPDGSKVAFEA----LGKIWLKSLPDGKMSRLT-ELGNDIGELYPQWSRDGKN 406

Query: 316 IVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--- 371
           IVF +  +  +  + V+ + G   K+++ +    Y +P ++P G+L+ + K  G      
Sbjct: 407 IVFTTWNDQDQGAVQVISAKGGKAKQLTTE-PGKYVEPTFAPNGELVVYRKTQGGNLTPR 465

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                  I  +     Q   +  +       +  S   + F      D   +L SI+L+G
Sbjct: 466 TWSQEPGIYKVDLKTKQNTKITAEGYQA--QFGASAERIFFM-NSGDDDTPQLASINLDG 522

Query: 426 RNETL 430
            ++ +
Sbjct: 523 FDKRV 527



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 44/103 (42%), Gaps = 9/103 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRS 403
            E ++ +   SP G  + F         I  +   G + + L +  + Q  P +SP+G+ 
Sbjct: 37  NEGTWMNLSVSPDGQHLVFDLLGD----IYQIPVTGGEAKPLAQGISWQMQPVYSPNGKH 92

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
           + F+   DG  G  ++ ++ +G N   + +  +   + P W  
Sbjct: 93  IAFTSDADG--GDNIWIMNADGSNPRTVTSETFRLLNSPAWSP 133


>gi|71277933|ref|YP_269288.1| amidohydrolase family protein [Colwellia psychrerythraea 34H]
 gi|71143673|gb|AAZ24146.1| amidohydrolase family protein [Colwellia psychrerythraea 34H]
          Length = 1071

 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 80/208 (38%), Gaps = 25/208 (12%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              +    + +GK  +  +  D    IY++         L   +   +   +SPD   I 
Sbjct: 45  GTWMNVDLNPDGKTIIFDLLGD----IYTMPASGGEATPLMTDIAWQMQPRFSPDGKYIA 100

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FT-KFSGEKFA 372
           F SD +G + L++M+++GS+ K ++ +       P WSP G+ I     +T   S     
Sbjct: 101 FTSDEDGGDNLWIMKADGSEAKAVTTETFRLLNSPAWSPDGNYIVGRKHYTGTRSLGAGE 160

Query: 373 IGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLYS 420
           + +  K G    +L +  N Q     P +S  G+ + FS+            D+   +Y 
Sbjct: 161 VWMYHKSGGNGVMLTKRPNEQKDLGEPAFSHDGKYVYFSQDATPGKSFHYSKDSEKGIYK 220

Query: 421 IDL----NGRNETLINTPAYASDPQWVG 444
           I       G  + +++    A  P    
Sbjct: 221 IKRLELETGEIKVVVSGKGGAIRPTLSP 248



 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 90/223 (40%), Gaps = 28/223 (12%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + + +    D     +Y M      A   + +  +  + PRFS +GK    +  +D 
Sbjct: 54  PDGKTIIFDLLGD-----IYTMPASGGEATPLMTDI-AWQMQPRFSPDGKYIAFTSDEDG 107

Query: 281 AMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVMQSN 334
             +++ +    +  + +T   F +  S ++SPD + IV    +   R  G  ++++   +
Sbjct: 108 GDNLWIMKADGSEAKAVTTETFRLLNSPAWSPDGNYIVGRKHYTGTRSLGAGEVWMYHKS 167

Query: 335 GSDQKRISQDKEA--SYFDPVWSPQGDLIAFTK-------------FSGEKFAIGVMKKD 379
           G +   +++         +P +S  G  + F++                  + I  ++ +
Sbjct: 168 GGNGVMLTKRPNEQKDLGEPAFSHDGKYVYFSQDATPGKSFHYSKDSEKGIYKIKRLELE 227

Query: 380 GSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             + +++V        PT SP G+ L F  + D  +   LY++
Sbjct: 228 TGEIKVVVSGKGGAIRPTLSPDGKYLAFISRDDFQSNLYLYNL 270



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 101/312 (32%), Gaps = 56/312 (17%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
             +    +    + +  + G N   LT  P+  + L EP FS + + V ++         
Sbjct: 149 HYTGTRSLGAGEVWMYHKSGGNGVMLTKRPNEQKDLGEPAFSHDGKYVYFSQDATPGKSF 208

Query: 239 VYLMDTRID-----------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            Y  D+                 K + + +   + P  S +GK      + D   ++Y  
Sbjct: 209 HYSKDSEKGIYKIKRLELETGEIKVVVSGKGGAIRPTLSPDGKYLAFISRDDFQSNLYLY 268

Query: 288 DLQSNATERLTNTLFINIS-----------ASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +L++    ++ + L  ++             +++PDS  +VF S      ++  +  +  
Sbjct: 269 NLKNGEQSKVYDGLDRDMQETWAIHGVYPTMAWTPDSEGLVFWS----GGKINKLSLDSK 324

Query: 337 DQKRISQDKEAS----------------------YFDPVWSPQGDLIAFTKFSGEKFAIG 374
             K I    + +                        D   SP G L  +         + 
Sbjct: 325 KAKVIDFHVKTTKKIQTAVRFPQDLDQKSFDTKMLRDVKVSPNGKLAVYESMG----HLY 380

Query: 375 VMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                  + + L +  +     P++S  G+ +++    D + G         G+ +T+  
Sbjct: 381 TKSLPKGKPKRLTKQKSQFELNPSFSRDGKKIVYVSWDDKNLGQVRVVSSRGGKGKTITR 440

Query: 433 TPAYASDPQWVG 444
            P    +P +  
Sbjct: 441 EPGKYVEPSFSP 452



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 72/201 (35%), Gaps = 22/201 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQK 278
           SPN +   Y +             +     PKR+   +S   L P FS +GK+ +     
Sbjct: 365 SPNGKLAVYESMGH------LYTKSLPKGKPKRLTKQKSQFELNPSFSRDGKKIVYVSWD 418

Query: 279 DEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---------KEQL 328
           D+ +  +  V  +    + +T      +  S+SPD   +V+     G            +
Sbjct: 419 DKNLGQVRVVSSRGGKGKTITREPGKYVEPSFSPDGKAVVYRKVTGGFITDPTWGLNPGV 478

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y +   G   K ++++       P +  + D I +    GE   I  +  DG  +  L +
Sbjct: 479 YAVSVKGGKAKLVTEEG----VQPHFGARNDRI-YVTRDGETPHISRIDIDGQHDTKLYQ 533

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
                    SP G  L F+ +
Sbjct: 534 GKFASEYRVSPDGNYLAFAER 554



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 97/297 (32%), Gaps = 42/297 (14%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G + +  L      +   +   +  M   G     L         +PRFSP+ + +A+
Sbjct: 43  RSGTWMNVDLNPDGKTIIFDLLGDIYTMPASGGEATPLMTD-IAWQMQPRFSPDGKYIAF 101

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMD 283
            + D++    +++M      A         ++ +P +S +G   +     +  +   A +
Sbjct: 102 TS-DEDGGDNLWIMKADGSEAKAVTTETFRLLNSPAWSPDGNYIVGRKHYTGTRSLGAGE 160

Query: 284 IYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDRE-------------GKEQ 327
           ++           LT            ++S D   + F  D               G  +
Sbjct: 161 VWMYHKSGGNGVMLTKRPNEQKDLGEPAFSHDGKYVYFSQDATPGKSFHYSKDSEKGIYK 220

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +  ++    + K +   K  +   P  SP G  +AF      +  + +      ++  + 
Sbjct: 221 IKRLELETGEIKVVVSGKGGAIR-PTLSPDGKYLAFISRDDFQSNLYLYNLKNGEQSKVY 279

Query: 388 EDSNLQA----------PT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +  +             PT  W+P    L+F        G K+  + L+ +   +I+
Sbjct: 280 DGLDRDMQETWAIHGVYPTMAWTPDSEGLVFWS------GGKINKLSLDSKKAKVID 330



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 100/250 (40%), Gaps = 38/250 (15%)

Query: 218 RFSPNQQKVAYATYD-------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----- 265
            ++P+ + + + +         D    +V     +  +  +    F   +    F     
Sbjct: 300 AWTPDSEGLVFWSGGKINKLSLDSKKAKVIDFHVKTTKKIQTAVRFPQDLDQKSFDTKML 359

Query: 266 -----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFE 319
                S NGK A+          +Y+  L     +RLT       ++ S+S D  +IV+ 
Sbjct: 360 RDVKVSPNGKLAVYESMG----HLYTKSLPKGKPKRLTKQKSQFELNPSFSRDGKKIVYV 415

Query: 320 S-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------- 369
           S D +   Q+ V+ S G   K I+++    Y +P +SP G  + + K +G          
Sbjct: 416 SWDDKNLGQVRVVSSRGGKGKTITRE-PGKYVEPSFSPDGKAVVYRKVTGGFITDPTWGL 474

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              +  +   G + +L+ E+     P +      +  +  +DG+T   +  ID++G+++T
Sbjct: 475 NPGVYAVSVKGGKAKLVTEEG--VQPHFGARNDRIYVT--RDGET-PHISRIDIDGQHDT 529

Query: 430 LINTPAYASD 439
            +    +AS+
Sbjct: 530 KLYQGKFASE 539



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 9/103 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRS 403
           +  ++ +   +P G  I F         I  M   G +   L+ D   Q  P +SP G+ 
Sbjct: 43  RSGTWMNVDLNPDGKTIIFDLLGD----IYTMPASGGEATPLMTDIAWQMQPRFSPDGKY 98

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
           + F+  +DG  G  L+ +  +G     + T  +   + P W  
Sbjct: 99  IAFTSDEDG--GDNLWIMKADGSEAKAVTTETFRLLNSPAWSP 139



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 68/200 (34%), Gaps = 51/200 (25%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           +I++VS           + V+   G   + +T    + + EP FSP+ + V Y       
Sbjct: 411 KIVYVS---WDDKNLGQVRVVSSRGGKGKTITREPGKYV-EPSFSPDGKAVVY------- 459

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                          +++      I  P +                  +Y+V ++    +
Sbjct: 460 ---------------RKVT--GGFITDPTW-------------GLNPGVYAVSVKGGKAK 489

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            +T      +   +   + +I    D      +  +  +G    ++ Q K AS +    S
Sbjct: 490 LVTEEG---VQPHFGARNDRIYVTRD-GETPHISRIDIDGQHDTKLYQGKFASEY--RVS 543

Query: 356 PQGDLIAFTKFSGEKFAIGV 375
           P G+ +AF     E+F + V
Sbjct: 544 PDGNYLAFA----ERFKVFV 559


>gi|163757603|ref|ZP_02164692.1| putative TolB-like protein [Hoeflea phototrophica DFL-43]
 gi|162285105|gb|EDQ35387.1| putative TolB-like protein [Hoeflea phototrophica DFL-43]
          Length = 278

 Score =  132 bits (333), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 81/208 (38%), Gaps = 15/208 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +++  +   D     ++++        +  G   S      +S +G       ++D
Sbjct: 74  SPDGERLVISDSTDTGQSCIWVLPIAGGIPERITGQVPSWWHG--WSPDGSTLAYVGRRD 131

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +   IY++ L     E L +         YSPD + I F SDR G   L+ + + G + +
Sbjct: 132 DGFGIYTISLAGGDEEHLISGGGHYDGPDYSPDGAFIWFNSDRTGSMDLWRIPAAGGEPQ 191

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVE--- 388
           ++++D  A++F P  +P G  + +  +              + ++       R L+    
Sbjct: 192 QMTRDDRANWF-PHPAPDGRSVLYLSYAPRTEGHPRDRDVELRLLDLADQSVRTLLSLFG 250

Query: 389 -DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
               +  P WSP G    F R +  +  
Sbjct: 251 GQGTINVPCWSPDGSRFAFVRYQPAEAN 278



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 91/245 (37%), Gaps = 18/245 (7%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +++  P ++P+   VA     D  + RV L     D  P    +  +       S +G+R
Sbjct: 24  RLIEAPNWTPDG--VALIVNGDGRMFRVPLE--APDLVPIDTSHAINCNNDHGVSPDGER 79

Query: 272 ALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            +IS   D     I+ + +     ER+T     +    +SPD S + +   R+    +Y 
Sbjct: 80  LVISDSTDTGQSCIWVLPIAGGIPERIT-GQVPSWWHGWSPDGSTLAYVGRRDDGFGIYT 138

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-ED 389
           +   G D++ +       Y  P +SP G  I F         +  +   G + + +  +D
Sbjct: 139 ISLAGGDEEHLISGGGH-YDGPDYSPDGAFIWFNSDRTGSMDLWRIPAAGGEPQQMTRDD 197

Query: 390 SNLQAPTWSPSGRSLIFSRK------KDGDTGSKLYSIDLNGRNET----LINTPAYASD 439
                P  +P GRS+++            D   +L  +DL  ++      L       + 
Sbjct: 198 RANWFPHPAPDGRSVLYLSYAPRTEGHPRDRDVELRLLDLADQSVRTLLSLFGGQGTINV 257

Query: 440 PQWVG 444
           P W  
Sbjct: 258 PCWSP 262



 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 82/204 (40%), Gaps = 15/204 (7%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
               L +Y + T      + +     +I AP ++ +G    +++  +    ++ V L++ 
Sbjct: 2   MRSALCIYEIATGT---VEEVLATPRLIEAPNWTPDG----VALIVNGDGRMFRVPLEAP 54

Query: 293 ATERLTNTLFINIS--ASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASY 349
               +  +  IN +     SPD  ++V   S   G+  ++V+   G   +RI+   +   
Sbjct: 55  DLVPIDTSHAINCNNDHGVSPDGERLVISDSTDTGQSCIWVLPIAGGIPERIT--GQVPS 112

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSR 408
           +   WSP G  +A+     + F I  +   G  +E L+    +   P +SP G  + F+ 
Sbjct: 113 WWHGWSPDGSTLAYVGRRDDGFGIYTISLAGGDEEHLISGGGHYDGPDYSPDGAFIWFNS 172

Query: 409 KKDGDTGSKLYSIDLNGRNETLIN 432
            + G     L+ I   G     + 
Sbjct: 173 DRTGSM--DLWRIPAAGGEPQQMT 194



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 70/199 (35%), Gaps = 14/199 (7%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  S  +   ++ + V+   G     +T       +   +SP+   +AY    D D   +
Sbjct: 80  LVISDSTDTGQSCIWVLPIAGGIPERIT--GQVPSWWHGWSPDGSTLAYVGRRD-DGFGI 136

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y +          I +       P +S +G     +  +  +MD++ +       +++T 
Sbjct: 137 YTISLAGGDEEHLI-SGGGHYDGPDYSPDGAFIWFNSDRTGSMDLWRIPAAGGEPQQMTR 195

Query: 300 TLFINISASYSPDSSQIVFESD--------REGKEQLYVMQSNGSDQKRI--SQDKEASY 349
               N     +PD   +++ S         R+   +L ++       + +      + + 
Sbjct: 196 DDRANWFPHPAPDGRSVLYLSYAPRTEGHPRDRDVELRLLDLADQSVRTLLSLFGGQGTI 255

Query: 350 FDPVWSPQGDLIAFTKFSG 368
             P WSP G   AF ++  
Sbjct: 256 NVPCWSPDGSRFAFVRYQP 274


>gi|329896695|ref|ZP_08271688.1| amidohydrolase family protein [gamma proteobacterium IMCC3088]
 gi|328921631|gb|EGG29007.1| amidohydrolase family protein [gamma proteobacterium IMCC3088]
          Length = 1092

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 31/220 (14%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                  L    S +G R +     D   D+Y V ++    +RLT TL   +   +SPD 
Sbjct: 58  TTDEGTWLNVDVSPDGTRIVF----DMLGDLYLVPIEGGEAQRLTTTLAQEVQPRFSPDG 113

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FT-KFSG 368
           + + + SD  G   ++VM     +++ I+ +K  S  +P W P G  I     FT   S 
Sbjct: 114 TSLTYISDANGGNNIFVMDLASKEERPITTEKFRSLTNPRWHPNGSGIVARKHFTGSRSL 173

Query: 369 EKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRK--------KDGDTGS 416
               +     DG     L     E  +   P +SP GR L +++          + +   
Sbjct: 174 GSGEMWFYHLDGGSGVQLTTKRNEQQDENDPVYSPDGRYLFYTQDATPGPYFQYNKNPHE 233

Query: 417 KLYS---IDLN-GRNETLINTPAYA------SDPQWVGFM 446
            +Y    +DL+ G N  L+  P  A       D +++ ++
Sbjct: 234 GIYVTRRLDLDTGENIALLGGPGGAVRPEPSPDGRYIAYV 273



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 104/307 (33%), Gaps = 31/307 (10%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            I  ++      F +    V+    +    + L  M   G        + +        S
Sbjct: 13  AILAALMTPPYIFAAPG--VATDSDAEEADSPLHQMIWQGPTETVEFTTDEGTWLNVDVS 70

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+  ++ +    D     +YL+        +R+    +  + PRFS +G         + 
Sbjct: 71  PDGTRIVFDMLGD-----LYLVPIE-GGEAQRLTTTLAQEVQPRFSPDGTSLTYISDANG 124

Query: 281 AMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIV----FESDRE-GKEQLYVMQSN 334
             +I+ +DL S     +T   F +  +  + P+ S IV    F   R  G  +++    +
Sbjct: 125 GNNIFVMDLASKEERPITTEKFRSLTNPRWHPNGSGIVARKHFTGSRSLGSGEMWFYHLD 184

Query: 335 GSDQKRISQDKE--ASYFDPVWSPQGDLIAFT-------------KFSGEKFAIGVMKKD 379
           G    +++  +       DPV+SP G  + +T                   +    +  D
Sbjct: 185 GGSGVQLTTKRNEQQDENDPVYSPDGRYLFYTQDATPGPYFQYNKNPHEGIYVTRRLDLD 244

Query: 380 GSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             +   LL        P  SP GR + + ++   D+   LY     G+++ L     +  
Sbjct: 245 TGENIALLGGPGGAVRPEPSPDGRYIAYVKRIQTDSVLMLYD-RRTGQSKALYRKLDHDQ 303

Query: 439 DPQWVGF 445
              W  F
Sbjct: 304 QEVWALF 310



 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 50/332 (15%), Positives = 100/332 (30%), Gaps = 63/332 (18%)

Query: 163 YQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRD--QILFEPR 218
           ++S+T  +   N   +      +    +    +     DG +   LT  R+  Q   +P 
Sbjct: 146 FRSLTNPRWHPNGSGIVARKHFTGSRSLGSGEMWFYHLDGGSGVQLTTKRNEQQDENDPV 205

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-----------IGNFRSMILAPRFSS 267
           +SP+ + + Y           Y  +        R           +       + P  S 
Sbjct: 206 YSPDGRYLFYTQDATPGPYFQYNKNPHEGIYVTRRLDLDTGENIALLGGPGGAVRPEPSP 265

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----------SASYSPDSSQI 316
           +G+      +      +   D ++  ++ L   L  +            + +++PD+  I
Sbjct: 266 DGRYIAYVKRIQTDSVLMLYDRRTGQSKALYRKLDHDQQEVWALFGLYPNFAWTPDNDSI 325

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEAS----------------------YFDPVW 354
           VF +      +L+ +         I      S                        D   
Sbjct: 326 VFWA----GGKLHRINVESKAVVGIPFTASVSQVLAKTTKATPKVGVDEVTSMMLRDFAT 381

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD 413
           SP G  + F         +        + + L + D    AP +S  G+ L+F+  +DG 
Sbjct: 382 SPDGRYVVFHSLG----HLYYADVQNPKPKRLTKLDGFEYAPQFSADGKYLVFAHWQDGA 437

Query: 414 TGSKLYSIDLNGRN-----ETLINTPAYASDP 440
            GS +Y     G         + + P +   P
Sbjct: 438 YGS-IYRGSWRGAKGVSGLAKITSEPGHYQHP 468



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 114/359 (31%), Gaps = 68/359 (18%)

Query: 139 IIGKKFFSS--PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           ++G  +         +++  T++ ++    + +     + + ++S++       N++ VM
Sbjct: 80  MLGDLYLVPIEGGEAQRLTTTLAQEVQPRFSPDG----TSLTYISDANGG----NNIFVM 131

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATYDDEDILRVYLMDTRIDRAPKR 252
           D      R +T  + + L  PR+ PN   +     +          ++          + 
Sbjct: 132 DLASKEERPITTEKFRSLTNPRWHPNGSGIVARKHFTGSRSLGSGEMWFYHLDGGSGVQL 191

Query: 253 IG--NFRSMILAPRFSSNGKRALIS----------VQKDEAMDIYS---VDLQSNATERL 297
               N +     P +S +G+    +            K+    IY    +DL +     L
Sbjct: 192 TTKRNEQQDENDPVYSPDGRYLFYTQDATPGPYFQYNKNPHEGIYVTRRLDLDTGENIAL 251

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------- 348
                  +    SPD   I +    +    L +        K + +  +           
Sbjct: 252 LGGPGGAVRPEPSPDGRYIAYVKRIQTDSVLMLYDRRTGQSKALYRKLDHDQQEVWALFG 311

Query: 349 -YFDPVWSPQGDLIAFTKFSGEKFAIGV-------MKKDGSQERLLVED-------SNLQ 393
            Y +  W+P  D I F    G+   I V       +    S  ++L +           +
Sbjct: 312 LYPNFAWTPDNDSIVFWA-GGKLHRINVESKAVVGIPFTASVSQVLAKTTKATPKVGVDE 370

Query: 394 APTW-------SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
             +        SP GR ++F       +   LY  D+ N + + L     +   PQ+  
Sbjct: 371 VTSMMLRDFATSPDGRYVVF------HSLGHLYYADVQNPKPKRLTKLDGFEYAPQFSA 423



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 85/204 (41%), Gaps = 27/204 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + V + +        +Y  D + +  PKR+        AP+FS++GK  + +  +D
Sbjct: 382 SPDGRYVVFHSLGH-----LYYADVQ-NPKPKRLTKLDGFEYAPQFSADGKYLVFAHWQD 435

Query: 280 EAM-DIYSVDLQS----NATERLTNTLFINISASYSPDSSQIVFE-----SDR----EGK 325
            A   IY    +     +   ++T+          +   + +V++     S R      +
Sbjct: 436 GAYGSIYRGSWRGAKGVSGLAKITSEPGHYQHPDVNNQGA-VVYQKQTGNSFRGLLYGLE 494

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             +YV  + G + +R+ ++     F        DLIA+    G+K  I  +K+DG+Q+R 
Sbjct: 495 PGIYVSDNKG-EARRVLREGRKPIFLND-----DLIAYEHGGGDKRFISTVKRDGTQQRT 548

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRK 409
                ++      P+G  + + + 
Sbjct: 549 RYSLGSISEWAIDPAGEHIAYRKD 572


>gi|114561197|ref|YP_748710.1| amidohydrolase [Shewanella frigidimarina NCIMB 400]
 gi|114332490|gb|ABI69872.1| amidohydrolase [Shewanella frigidimarina NCIMB 400]
          Length = 1060

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 78/206 (37%), Gaps = 25/206 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               +    S +G+  +  +  D    IY + +     + L   +   +   YSPD   I
Sbjct: 51  EGTWMNVNVSPDGEHIVFDLLGD----IYQIPIAGGEAKPLAQGIAWQMQPVYSPDGKYI 106

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL-IAFTKFSGEKF---- 371
            F SD +G + +++M ++G++   I+ +       P WSP     +A   F+G +     
Sbjct: 107 AFTSDEDGGDNIWIMNADGTNPHAITTETFRLLNSPAWSPDSQYLVARKHFTGTRSLGAG 166

Query: 372 AIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDTGSKLY 419
            + +    G +   L E  N Q     P +SP GR + FS+            D+   +Y
Sbjct: 167 EVWMFHVAGGEGVKLTERPNEQKDLGEPAYSPDGRYIYFSQDSTPGKTFHYSKDSVKGIY 226

Query: 420 SI----DLNGRNETLINTPAYASDPQ 441
            I       G  E LI     A  P 
Sbjct: 227 KIKRYDTQTGDIEVLIEGTGGAIRPT 252



 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 93/234 (39%), Gaps = 30/234 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + + +      DI ++ +         K +    +  + P +S +GK    +  +D
Sbjct: 60  SPDGEHIVF--DLLGDIYQIPI----AGGEAKPLAQGIAWQMQPVYSPDGKYIAFTSDED 113

Query: 280 EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVMQS 333
              +I+ ++        +T   F +  S ++SPDS  +V    F   R  G  ++++   
Sbjct: 114 GGDNIWIMNADGTNPHAITTETFRLLNSPAWSPDSQYLVARKHFTGTRSLGAGEVWMFHV 173

Query: 334 NGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS-------------GEKFAIGVMKK 378
            G +  ++++         +P +SP G  I F++ S                + I     
Sbjct: 174 AGGEGVKLTERPNEQKDLGEPAYSPDGRYIYFSQDSTPGKTFHYSKDSVKGIYKIKRYDT 233

Query: 379 DGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
                 +L+E       PT SP G++L + ++    +   LY++DL    ET +
Sbjct: 234 QTGDIEVLIEGTGGAIRPTPSPDGKTLAYIKRDGFQST--LYTLDLKSGEETKL 285



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 60/314 (19%), Positives = 111/314 (35%), Gaps = 57/314 (18%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             S  S      +   D    +I  L       +  P  SP+ + +AY   D      +Y
Sbjct: 216 HYSKDSVKGIYKIKRYDTQTGDIEVLIEGTGGAI-RPTPSPDGKTLAYIKRD-GFQSTLY 273

Query: 241 LMDTRIDRAPKRIGNFR----------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            +D +     K                 +     ++ + K  +   +      I  +D+ 
Sbjct: 274 TLDLKSGEETKLYDKLDRDMQETWAIHGVYPTMSWTKDNKHIVFWAKG----KINKLDVD 329

Query: 291 SNATE----------------RLTNTLFIN-------ISASYSPDSSQIVFESDREGKEQ 327
           S                    R T  L  +         A  SPD  ++VFE+      +
Sbjct: 330 SKQVTDIPFSVSTQRDIQPSVRFTQNLDKDEFDVKMLRMAQVSPDGEKVVFEA----LGK 385

Query: 328 LYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERL 385
           ++V        KR+++ D + +   P WS  G  I FT ++ ++   + V+   G + ++
Sbjct: 386 IWVRDIKDGKHKRLTRLDDDINELFPQWSRDGKDIVFTTWNDQQQGTVSVVSARGGKAKV 445

Query: 386 LV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-------LYSIDLNGRNETLIN----T 433
           L  E      PT+SP G  +++ + + G    +       LY +D+ G+  T +      
Sbjct: 446 LTNEPGKYVEPTFSPDGEYIVYRKARGGYMTPRTWSQEPGLYKVDIKGKQSTKLTASGHQ 505

Query: 434 PAYASDPQWVGFMD 447
           P + +D   V FMD
Sbjct: 506 PQFGNDSDRVYFMD 519



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 60/342 (17%), Positives = 117/342 (34%), Gaps = 61/342 (17%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLT--PSR 210
            H I+ + ++ +       +S+ L      +    +    + +    G     LT  P+ 
Sbjct: 128 PHAITTETFRLLNSPAWSPDSQYLVARKHFTGTRSLGAGEVWMFHVAGGEGVKLTERPNE 187

Query: 211 DQILFEPRFSPNQQKVA------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            + L EP +SP+ + +             Y+    + I ++   DT+       I     
Sbjct: 188 QKDLGEPAYSPDGRYIYFSQDSTPGKTFHYSKDSVKGIYKIKRYDTQTGDIEVLIEGTGG 247

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-----------A 307
            I  P  S +GK      +      +Y++DL+S    +L + L  ++             
Sbjct: 248 AIR-PTPSPDGKTLAYIKRDGFQSTLYTLDLKSGEETKLYDKLDRDMQETWAIHGVYPTM 306

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK----------------RISQDKEASYFD 351
           S++ D+  IVF +    K ++  +  +                     R +Q+ +   FD
Sbjct: 307 SWTKDNKHIVFWA----KGKINKLDVDSKQVTDIPFSVSTQRDIQPSVRFTQNLDKDEFD 362

Query: 352 ------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGR 402
                    SP G+ + F         I V      + + L    +D N   P WS  G+
Sbjct: 363 VKMLRMAQVSPDGEKVVFEALG----KIWVRDIKDGKHKRLTRLDDDINELFPQWSRDGK 418

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            ++F+   D   G+        G+ + L N P    +P +  
Sbjct: 419 DIVFTTWNDQQQGTVSVVSARGGKAKVLTNEPGKYVEPTFSP 460



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 99/324 (30%), Gaps = 70/324 (21%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATY 231
            I F S+          + +M+ DG N   +T    ++L  P +SP+ Q +     +   
Sbjct: 105 YIAFTSDEDGGDN----IWIMNADGTNPHAITTETFRLLNSPAWSPDSQYLVARKHFTGT 160

Query: 232 DDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALIS----------VQKD 279
                  V++         K     N +  +  P +S +G+    S            KD
Sbjct: 161 RSLGAGEVWMFHVAGGEGVKLTERPNEQKDLGEPAYSPDGRYIYFSQDSTPGKTFHYSKD 220

Query: 280 ---EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                  I   D Q+   E L       I  + SPD   + +      +  LY +     
Sbjct: 221 SVKGIYKIKRYDTQTGDIEVLIEGTGGAIRPTPSPDGKTLAYIKRDGFQSTLYTLDLKSG 280

Query: 337 DQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           ++ ++          +      Y    W+     I F      K  I  +  D  Q   +
Sbjct: 281 EETKLYDKLDRDMQETWAIHGVYPTMSWTKDNKHIVFWA----KGKINKLDVDSKQVTDI 336

Query: 387 ---VEDSNLQAPT---------------------WSPSGRSLIFSRKKDGDTGSKLYSID 422
              V       P+                      SP G  ++F      +   K++  D
Sbjct: 337 PFSVSTQRDIQPSVRFTQNLDKDEFDVKMLRMAQVSPDGEKVVF------EALGKIWVRD 390

Query: 423 L-NGRNETLINTPAYASD--PQWV 443
           + +G+++ L       ++  PQW 
Sbjct: 391 IKDGKHKRLTRLDDDINELFPQWS 414



 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 104/296 (35%), Gaps = 42/296 (14%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + +  +      +   +   +  +   G   + L         +P +SP+ + +A+ 
Sbjct: 51  EGTWMNVNVSPDGEHIVFDLLGDIYQIPIAGGEAKPLAQG-IAWQMQPVYSPDGKYIAFT 109

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMDI 284
           + D++    +++M+               ++ +P +S + +  +     +  +   A ++
Sbjct: 110 S-DEDGGDNIWIMNADGTNPHAITTETFRLLNSPAWSPDSQYLVARKHFTGTRSLGAGEV 168

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDRE-------------GKEQL 328
           +   +      +LT            +YSPD   I F  D               G  ++
Sbjct: 169 WMFHVAGGEGVKLTERPNEQKDLGEPAYSPDGRYIYFSQDSTPGKTFHYSKDSVKGIYKI 228

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   D + +  +       P  SP G  +A+ K  G +  +  +     +E  L +
Sbjct: 229 KRYDTQTGDIEVLI-EGTGGAIRPTPSPDGKTLAYIKRDGFQSTLYTLDLKSGEETKLYD 287

Query: 389 --DSNLQA--------P--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             D ++Q         P  +W+   + ++F  K       K+  +D++ +  T I 
Sbjct: 288 KLDRDMQETWAIHGVYPTMSWTKDNKHIVFWAK------GKINKLDVDSKQVTDIP 337



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 90/232 (38%), Gaps = 27/232 (11%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQK 278
           SP+ +KV +     E + ++++ D +  +  +       +  L P++S +GK  + +   
Sbjct: 372 SPDGEKVVF-----EALGKIWVRDIKDGKHKRLTRLDDDINELFPQWSRDGKDIVFTTWN 426

Query: 279 DEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQL 328
           D+    +  V  +    + LTN     +  ++SPD   IV+   R G            L
Sbjct: 427 DQQQGTVSVVSARGGKAKVLTNEPGKYVEPTFSPDGEYIVYRKARGGYMTPRTWSQEPGL 486

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y +   G    +++    AS   P +    D + F   SGE      +  +G ++R    
Sbjct: 487 YKVDIKGKQSTKLT----ASGHQPQFGNDSDRVYF-MDSGETPEFASIGMNGFEKRTHYT 541

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             +      SP+G  L F+ +       ++Y        ET+   P  ++ P
Sbjct: 542 SDHATEFRLSPNGEHLAFAER------FRVYVTPFAKHGETIAIGPKASNLP 587



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 91/253 (35%), Gaps = 43/253 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------------ 265
            ++ + + + +  +    I ++ +   ++   P  +   R +  + RF            
Sbjct: 307 SWTKDNKHIVF--WAKGKINKLDVDSKQVTDIPFSVSTQRDIQPSVRFTQNLDKDEFDVK 364

Query: 266 -------SSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQI 316
                  S +G++ +          I+  D++    +RLT  +     +   +S D   I
Sbjct: 365 MLRMAQVSPDGEKVVFEA----LGKIWVRDIKDGKHKRLTRLDDDINELFPQWSRDGKDI 420

Query: 317 VFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---- 371
           VF +  + ++  + V+ + G   K ++ +    Y +P +SP G+ I + K  G       
Sbjct: 421 VFTTWNDQQQGTVSVVSARGGKAKVLTNE-PGKYVEPTFSPDGEYIVYRKARGGYMTPRT 479

Query: 372 -----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +  +   G Q   L    +   P +      + F    D     +  SI +NG 
Sbjct: 480 WSQEPGLYKVDIKGKQSTKLTASGHQ--PQFGNDSDRVYFM---DSGETPEFASIGMNGF 534

Query: 427 NETLINTPAYASD 439
            +    T  +A++
Sbjct: 535 EKRTHYTSDHATE 547



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 9/103 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRS 403
            E ++ +   SP G+ I F         I  +   G + + L +    Q  P +SP G+ 
Sbjct: 50  TEGTWMNVNVSPDGEHIVFDLLGD----IYQIPIAGGEAKPLAQGIAWQMQPVYSPDGKY 105

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
           + F+  +DG  G  ++ ++ +G N   I T  +   + P W  
Sbjct: 106 IAFTSDEDG--GDNIWIMNADGTNPHAITTETFRLLNSPAWSP 146



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 91/281 (32%), Gaps = 72/281 (25%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            + DDI +       D       +  +  +   + ++ V+   G   + LT    + + E
Sbjct: 401 RLDDDINELFPQWSRDGKD----IVFTTWNDQQQGTVSVVSARGGKAKVLTNEPGKYV-E 455

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALIS 275
           P FSP+ + + Y                            R   + PR +S         
Sbjct: 456 PTFSPDGEYIVY-------------------------RKARGGYMTPRTWS--------- 481

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               +   +Y VD++   + +LT +        +  DS ++ F  D     +   +  NG
Sbjct: 482 ----QEPGLYKVDIKGKQSTKLTASGH---QPQFGNDSDRVYFM-DSGETPEFASIGMNG 533

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            +++  +        +   SP G+ +AF     E+F + V       E + +       P
Sbjct: 534 FEKR--THYTSDHATEFRLSPNGEHLAFA----ERFRVYVTPFAKHGETIAIGPKASNLP 587

Query: 396 ------------TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                       +W+     L ++       G  LY  D++
Sbjct: 588 ITQLSARAGESISWNGKNNQLYWT------LGPDLYQADVD 622


>gi|269836774|ref|YP_003319002.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269786037|gb|ACZ38180.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 655

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 52/231 (22%), Positives = 89/231 (38%), Gaps = 46/231 (19%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPD 312
           M+  P+ S +G      V +    +      I++V +       LT     + +  +SPD
Sbjct: 16  MVSDPQVSPDGTLVAFVVTRMYRKENCYRSGIWTVPVAGGEPRPLTAGTARDSTPRWSPD 75

Query: 313 SSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------- 364
              + F S R G K QL+ + ++G + ++++   E     PVWSP+GD +AF        
Sbjct: 76  GRWLAFLSTRGGDKPQLWYLPADGGEARQLTNLPEG-VEQPVWSPRGDALAFVSKVGPEK 134

Query: 365 --------------KFSGEKF------AIGVMKKDGSQE-----RLLVEDSN-LQAPTWS 398
                         +F GE F       I V+  D S       R + +     + P WS
Sbjct: 135 QSDSDVRVIRTIRYRFDGEGFLDDKYRQIWVVPFDPSNPSMPEARQITDGPYEHRDPAWS 194

Query: 399 PSGRSLIFSRKKDGDTGS----KLYSIDLNGRNETLIN-TPAYASDPQWVG 444
           P+G  + F+  +  D        ++++   G     I   P   S+P W  
Sbjct: 195 PTGHEIAFTAARHPDWELGVLQDIWAVSAAGGPPRKITCAPGAWSEPVWSP 245



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 87/303 (28%), Gaps = 58/303 (19%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-------------- 231
            G  K  L  +  DG   R LT   + +  +P +SP    +A+ +               
Sbjct: 85  RGGDKPQLWYLPADGGEARQLTNLPEGVE-QPVWSPRGDALAFVSKVGPEKQSDSDVRVI 143

Query: 232 --------------DDEDILRVYLMDTRIDRAP--KRIGNFRSMILAPRFSSNGKRALIS 275
                         D    + V   D      P  ++I +       P +S  G     +
Sbjct: 144 RTIRYRFDGEGFLDDKYRQIWVVPFDPSNPSMPEARQITDGPYEHRDPAWSPTGHEIAFT 203

Query: 276 VQKDEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------FESDRE 323
             +          DI++V        ++T          +SPD + I       +     
Sbjct: 204 AARHPDWELGVLQDIWAVSAAGGPPRKITCAPGAWSEPVWSPDGTTIALLGPSDYRRADH 263

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDP-------------VWSPQGDLIAFTKFSGEK 370
               ++ + + G      +   + S  D               W  +G+ I F       
Sbjct: 264 ANVLVWTVLAGGGAPVPRTAALDRSAGDTTLGDIPRFSSSPVAWDSRGEAIHFLASDHGN 323

Query: 371 FAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +  +   D   ER++     +      P     +F+       G ++Y+   +G NE 
Sbjct: 324 THLFRVSLADNRIERVIGGQRRVGMVVPIPGDAGFVFAASTPTSPG-EIYACGPDGGNER 382

Query: 430 LIN 432
            + 
Sbjct: 383 QLT 385



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 65/261 (24%), Gaps = 39/261 (14%)

Query: 183 SVVSGIIKNSLCVMDRDGANI----RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
                     + V+  D +N                 +P +SP   ++A+      D   
Sbjct: 153 EGFLDDKYRQIWVVPFDPSNPSMPEARQITDGPYEHRDPAWSPTGHEIAFTAARHPDWEL 212

Query: 239 VYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRAL------ISVQKDEAMDIYSVD 288
             L D          P++I         P +S +G                  + +++V 
Sbjct: 213 GVLQDIWAVSAAGGPPRKITCAPGAWSEPVWSPDGTTIALLGPSDYRRADHANVLVWTVL 272

Query: 289 LQSNATERLT---NTLFINI----------SA-SYSPDSSQIVFESDREGKEQLYVMQSN 334
               A    T   +    +           S  ++      I F +   G   L+ +   
Sbjct: 273 AGGGAPVPRTAALDRSAGDTTLGDIPRFSSSPVAWDSRGEAIHFLASDHGNTHLFRVSLA 332

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
            +  +R+   +               +           I     DG  ER L + +    
Sbjct: 333 DNRIERVIGGQRRVGMVVPIPGDAGFVFAASTPTSPGEIYACGPDGGNERQLTDVNREWL 392

Query: 394 --------APTW--SPSGRSL 404
                      W  SP G  +
Sbjct: 393 EEVELAEPEEIWATSPDGTRI 413



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 11/63 (17%)

Query: 395 PTWSPSGRSLIF----SRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWV 443
           P  SP G  + F      +K+    S ++++ + G     +        TP ++ D +W+
Sbjct: 20  PQVSPDGTLVAFVVTRMYRKENCYRSGIWTVPVAGGEPRPLTAGTARDSTPRWSPDGRWL 79

Query: 444 GFM 446
            F+
Sbjct: 80  AFL 82


>gi|109896795|ref|YP_660050.1| amidohydrolase [Pseudoalteromonas atlantica T6c]
 gi|109699076|gb|ABG38996.1| amidohydrolase [Pseudoalteromonas atlantica T6c]
          Length = 1113

 Score =  132 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 85/212 (40%), Gaps = 34/212 (16%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S NG++ +     D   D+Y   +       LT     NI  ++SPD  +I F SDR G
Sbjct: 70  VSPNGEKFVF----DMLGDLYVSSIGGGEATSLTQDFAWNIQPTFSPDGKKIAFISDRGG 125

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKKD 379
              ++VM S+GS+  +++++K      P WSP G  I       +  S     I +    
Sbjct: 126 MSNVWVMNSDGSNLVQVTKEKNNLIHSPKWSPDGQYIVANKGIMSSRSIPAGEIWLYHHS 185

Query: 380 GSQERLL-------VEDSNLQAPTWSPSGRSLIFSR--------KKDGDTGSKLYSIDL- 423
           G    +L        +  N+  P +SP G+ L +++          + D    +++I   
Sbjct: 186 GGDGMVLKKRVHGNPDQKNIADPAFSPDGKYLYYTQDVSPGSTFDYNRDPLKSIFAITRY 245

Query: 424 ---NGRNETLINT------PAYASDPQWVGFM 446
               G  E  I+       P  + D + + F+
Sbjct: 246 DMNTGEEERYISGTGGAVVPTPSPDGKQIAFI 277



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 100/257 (38%), Gaps = 34/257 (13%)

Query: 201 ANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            N+  +T + D+  +     SPN +K  +      D+L    + +        +    + 
Sbjct: 51  FNLNEVTINTDETTWSSLDVSPNGEKFVF------DMLGDLYVSSIGGGEATSLTQDFAW 104

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIV- 317
            + P FS +GK+      +    +++ ++   +   ++T      I S  +SPD   IV 
Sbjct: 105 NIQPTFSPDGKKIAFISDRGGMSNVWVMNSDGSNLVQVTKEKNNLIHSPKWSPDGQYIVA 164

Query: 318 ----FESDREGKEQLYVMQSNGSD----QKRISQDKEA-SYFDPVWSPQGDLIAFTKFSG 368
                 S      ++++   +G D    +KR+  + +  +  DP +SP G  + +T+   
Sbjct: 165 NKGIMSSRSIPAGEIWLYHHSGGDGMVLKKRVHGNPDQKNIADPAFSPDGKYLYYTQDVS 224

Query: 369 EK-------------FAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                          FAI     +   +ER +        PT SP G+ + F R+    T
Sbjct: 225 PGSTFDYNRDPLKSIFAITRYDMNTGEEERYISGTGGAVVPTPSPDGKQIAFIRRVKEKT 284

Query: 415 GSKLYSIDLNGRNETLI 431
           G  L+  D+    E+L+
Sbjct: 285 G--LFVKDIATGVESLL 299



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 119/332 (35%), Gaps = 74/332 (22%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-------Y 228
           +I F+S+        +++ VM+ DG+N+  +T  ++ ++  P++SP+ Q +         
Sbjct: 116 KIAFISDRGG----MSNVWVMNSDGSNLVQVTKEKNNLIHSPKWSPDGQYIVANKGIMSS 171

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILA-PRFSSNGKRALIS----------V 276
            +    +I   +          KR+ GN     +A P FS +GK    +           
Sbjct: 172 RSIPAGEIWLYHHSGGDGMVLKKRVHGNPDQKNIADPAFSPDGKYLYYTQDVSPGSTFDY 231

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +D    I+++   D+ +   ER  +     +  + SPD  QI F    + K  L+V   
Sbjct: 232 NRDPLKSIFAITRYDMNTGEEERYISGTGGAVVPTPSPDGKQIAFIRRVKEKTGLFVKDI 291

Query: 334 NGSDQKRIS----------QDKEASYFDPVWSPQGDLIAFTKFSGEKFA----------- 372
               +  +              E  +    W P    I F  ++G KF            
Sbjct: 292 ATGVESLLYLKLERDMQEGFGSEGYFPYFDWMPNSKRIVF--WTGGKFHSIDVKTQAVKD 349

Query: 373 --------IGVMKKDGSQERLLVEDSNLQAPTW---SPSGRSLIFSRKKDGDTGSKLYSI 421
                   +           +  E   ++   W   SP+G++++F          KLY  
Sbjct: 350 IPVSVKATVKYADAVRFDVDVAPEKFAVKMARWAQKSPNGQNIVF------QALGKLYIK 403

Query: 422 DL-NGRNETLINT-------PAYASDPQWVGF 445
           ++ +G+ + L          P Y+ D + + F
Sbjct: 404 EIKSGKVKRLTRQNDHDEYYPRYSHDGKKIVF 435



 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 99/268 (36%), Gaps = 45/268 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V    G     LT        +P FSP+ +K+A+ + D   +  V++M++      +
Sbjct: 84  DLYVSSIGGGEATSLTQDF-AWNIQPTFSPDGKKIAFIS-DRGGMSNVWVMNSDGSNLVQ 141

Query: 252 RIGNFRSMILAPRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNA---TERLTNTLFI 303
                 ++I +P++S +G+  +     +S +   A +I+            ++  +    
Sbjct: 142 VTKEKNNLIHSPKWSPDGQYIVANKGIMSSRSIPAGEIWLYHHSGGDGMVLKKRVHGNPD 201

Query: 304 N---ISASYSPDSSQIV----------FESDREGKEQLY---VMQSNGSDQKRISQDKEA 347
                  ++SPD   +           F+ +R+  + ++       N  +++R       
Sbjct: 202 QKNIADPAFSPDGKYLYYTQDVSPGSTFDYNRDPLKSIFAITRYDMNTGEEERYISGTGG 261

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV------------EDSNLQAP 395
           +   P  SP G  IAF +   EK  + V       E LL              +      
Sbjct: 262 AVV-PTPSPDGKQIAFIRRVKEKTGLFVKDIATGVESLLYLKLERDMQEGFGSEGYFPYF 320

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            W P+ + ++F       TG K +SID+
Sbjct: 321 DWMPNSKRIVFW------TGGKFHSIDV 342



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 97/265 (36%), Gaps = 44/265 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--------------IGNFRSMILAPR 264
           + PN +++ + T      + V     +      +              +   +  +   R
Sbjct: 322 WMPNSKRIVFWTGGKFHSIDVKTQAVKDIPVSVKATVKYADAVRFDVDVAPEKFAVKMAR 381

Query: 265 F---SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES 320
           +   S NG+  +          +Y  +++S   +RLT           YS D  +IVF +
Sbjct: 382 WAQKSPNGQNIVFQA----LGKLYIKEIKSGKVKRLTRQNDHDEYYPRYSHDGKKIVFTT 437

Query: 321 DREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---------K 370
             +     +  + ++G  +K IS++    + +P +S    LI + K +G          +
Sbjct: 438 WNDKDLGSVRTVSASGRSEKVISKE-PGHFIEPSFSTDDKLITYNKKTGGYLLAPEYSVE 496

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD--TGSKLYSIDLNGRNE 428
             I      G + R + ++ +  AP ++     + F+    G      +L S+DLNG ++
Sbjct: 497 PGIYTATVKGEKHRRVAKNGS--APHFAGDNSRVYFTESVSGSDYPEQQLVSVDLNGEDK 554

Query: 429 TLINTPAY-------ASDPQWVGFM 446
                          + D +W+ F+
Sbjct: 555 REHLYGGDKIAEYRLSPDKKWIAFV 579



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 85/228 (37%), Gaps = 23/228 (10%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-----NSLCVMDRDGANIRYLTPSRD 211
             +D +   +      F  ++   ++   +G          L + +     ++ LT   D
Sbjct: 359 KYADAVRFDVDVAPEKFAVKMARWAQKSPNGQNIVFQALGKLYIKEIKSGKVKRLTRQND 418

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              + PR+S + +K+ + T++D+D+  V  + +   R+ K I       + P FS++ K 
Sbjct: 419 HDEYYPRYSHDGKKIVFTTWNDKDLGSVRTV-SASGRSEKVISKEPGHFIEPSFSTDDKL 477

Query: 272 ALISVQKDE---------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              + +               IY+  ++     R+        +  ++ D+S++ F    
Sbjct: 478 ITYNKKTGGYLLAPEYSVEPGIYTATVKGEKHRRVAKNGS---APHFAGDNSRVYFTESV 534

Query: 323 EGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            G     +QL  +  NG D++      +    +   SP    IAF   
Sbjct: 535 SGSDYPEQQLVSVDLNGEDKREHLYGGD-KIAEYRLSPDKKWIAFVYQ 581



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 76/211 (36%), Gaps = 27/211 (12%)

Query: 218 RF---SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           R+   SPN Q + +         ++Y+ + +  +  +           PR+S +GK+ + 
Sbjct: 381 RWAQKSPNGQNIVFQALG-----KLYIKEIKSGKVKRLTRQNDHDEYYPRYSHDGKKIVF 435

Query: 275 SVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-------- 325
           +   D +   + +V     + + ++      I  S+S D   I +     G         
Sbjct: 436 TTWNDKDLGSVRTVSASGRSEKVISKEPGHFIEPSFSTDDKLITYNKKTGGYLLAPEYSV 495

Query: 326 -EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKF---AIGVMKKDG 380
              +Y     G   +R++++  A    P ++     + FT   SG  +    +  +  +G
Sbjct: 496 EPGIYTATVKGEKHRRVAKNGSA----PHFAGDNSRVYFTESVSGSDYPEQQLVSVDLNG 551

Query: 381 SQERL-LVEDSNLQAPTWSPSGRSLIFSRKK 410
             +R  L     +     SP  + + F  + 
Sbjct: 552 EDKREHLYGGDKIAEYRLSPDKKWIAFVYQY 582


>gi|226312267|ref|YP_002772161.1| peptidase [Brevibacillus brevis NBRC 100599]
 gi|226095215|dbj|BAH43657.1| putative peptidase [Brevibacillus brevis NBRC 100599]
          Length = 671

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 88/261 (33%), Gaps = 51/261 (19%)

Query: 212 QILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           +   +P+ SP+ + +AY     D+    + +L   ++D          S    PR+S +G
Sbjct: 17  RYASDPQLSPDGKTLAYVENQIDESHAYQNHLYLRKLDVDDPLPLTSGSRDTYPRWSPDG 76

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---------- 319
            +      +     I+ +D       +LT       + ++SPD   IVF           
Sbjct: 77  SKISFVSNRSGKPQIWLIDANGGEARQLTRCKNGVSNPTWSPDGKYIVFSSILDEGETFA 136

Query: 320 ----------------------SDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDP 352
                                 SD  G      +QL ++     +   +S D   ++   
Sbjct: 137 DLEAAEEKEKAKAIHVGRMKYKSDDLGFIYEKNKQLAIVHVETGEVTPLS-DGPYNHTIG 195

Query: 353 VWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLI 405
            WSP G  +A T    E         + ++  +G + + L         PTWSP G+ L 
Sbjct: 196 SWSPDGKWLAVTANRSEDPDFQHGIDVFIIPSEGGEWKKLTNSKGIFAYPTWSPDGKKLA 255

Query: 406 FSRKKDGD----TGSKLYSID 422
           +   +          +++  D
Sbjct: 256 YIGSESDTHLYAAQKRIWVYD 276



 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 51/333 (15%), Positives = 120/333 (36%), Gaps = 73/333 (21%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
             D  +     ++   S   +N L +   D  +   LT         PR+SP+  K+++ 
Sbjct: 25  SPDGKTLAYVENQIDESHAYQNHLYLRKLDVDDPLPLTSGS--RDTYPRWSPDGSKISFV 82

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--------- 280
           +       +++L+D       +++   ++ +  P +S +GK  + S   DE         
Sbjct: 83  SNRSGKP-QIWLIDAN-GGEARQLTRCKNGVSNPTWSPDGKYIVFSSILDEGETFADLEA 140

Query: 281 ----------------------------AMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                                          +  V +++     L++  + +   S+SPD
Sbjct: 141 AEEKEKAKAIHVGRMKYKSDDLGFIYEKNKQLAIVHVETGEVTPLSDGPYNHTIGSWSPD 200

Query: 313 SSQIVFESDREGKE------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              +   ++R           ++++ S G + K+++ + +  +  P WSP G  +A+   
Sbjct: 201 GKWLAVTANRSEDPDFQHGIDVFIIPSEGGEWKKLT-NSKGIFAYPTWSPDGKKLAYIGS 259

Query: 367 SGEKF------AIGVMKKDGSQERLLVED----------SNLQAP-------TWSPSGRS 403
             +         I V   + S    +  +           ++++P        W+  GR 
Sbjct: 260 ESDTHLYAAQKRIWVYDFEKSDYSCITANWDVQVGDSTIGDMRSPGHPNPGAVWTADGRG 319

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           + F   + G++G  +Y + L+G+  T++     
Sbjct: 320 MYFIASERGNSG--IYHVTLDGQVTTVVTGNRN 350



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 112/323 (34%), Gaps = 69/323 (21%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---- 230
           S+I FVS        K  + ++D +G   R LT  ++ +   P +SP+ + + +++    
Sbjct: 77  SKISFVSNR----SGKPQIWLIDANGGEARQLTRCKNGV-SNPTWSPDGKYIVFSSILDE 131

Query: 231 -------------------------YDDEDILRVYLMDTRI------DRAPKRIGNFRSM 259
                                    Y  +D+  +Y  + ++            + +    
Sbjct: 132 GETFADLEAAEEKEKAKAIHVGRMKYKSDDLGFIYEKNKQLAIVHVETGEVTPLSDGPYN 191

Query: 260 ILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDS 313
                +S +GK   ++  + E  D      ++ +  +    ++LTN+  I    ++SPD 
Sbjct: 192 HTIGSWSPDGKWLAVTANRSEDPDFQHGIDVFIIPSEGGEWKKLTNSKGIFAYPTWSPDG 251

Query: 314 SQIVFESDRE------GKEQLYVMQSNGSDQKRIS---------------QDKEASYFDP 352
            ++ +            +++++V     SD   I+               +         
Sbjct: 252 KKLAYIGSESDTHLYAAQKRIWVYDFEKSDYSCITANWDVQVGDSTIGDMRSPGHPNPGA 311

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           VW+  G  + F         I  +  DG    ++  + N+   +   + ++++ +   D 
Sbjct: 312 VWTADGRGMYFIASERGNSGIYHVTLDGQVTTVVTGNRNIYGFSLHENEQTVV-AAISDP 370

Query: 413 DTGSKLYSIDL-NGRNETLINTP 434
            T   LY + L +G  + L    
Sbjct: 371 STPGDLYQVSLKDGEEKRLTALN 393



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 37/101 (36%), Gaps = 8/101 (7%)

Query: 350 FDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            DP  SP G  +A+ +         +  + + K D      L   S    P WSP G  +
Sbjct: 20  SDPQLSPDGKTLAYVENQIDESHAYQNHLYLRKLDVDDPLPLTSGSRDTYPRWSPDGSKI 79

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
            F   + G    +++ ID NG     +       S+P W  
Sbjct: 80  SFVSNRSGK--PQIWLIDANGGEARQLTRCKNGVSNPTWSP 118



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 77/209 (36%), Gaps = 22/209 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA-----TYDDEDILRVYLMDTRI 246
            + ++  +G   + LT S+  I   P +SP+ +K+AY      T+      R+++ D   
Sbjct: 221 DVFIIPSEGGEWKKLTNSK-GIFAYPTWSPDGKKLAYIGSESDTHLYAAQKRIWVYDFEK 279

Query: 247 DRAPKRIGNFR--------SMILAP-------RFSSNGKRALISVQKDEAMDIYSVDLQS 291
                   N+           + +P        ++++G+       +     IY V L  
Sbjct: 280 SDYSCITANWDVQVGDSTIGDMRSPGHPNPGAVWTADGRGMYFIASERGNSGIYHVTLDG 339

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
             T  +T    I   + +  + + +   SD      LY +     ++KR++   E   F 
Sbjct: 340 QVTTVVTGNRNIYGFSLHENEQTVVAAISDPSTPGDLYQVSLKDGEEKRLTALNE-ELFA 398

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +  P  + I F    G K    ++K  G
Sbjct: 399 GMELPVPEEIEFVAKDGWKLHGWMLKPVG 427


>gi|225874010|ref|YP_002755469.1| peptidase, S9A/B/C family [Acidobacterium capsulatum ATCC 51196]
 gi|225793254|gb|ACO33344.1| peptidase, S9A/B/C family [Acidobacterium capsulatum ATCC 51196]
          Length = 696

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 68/351 (19%), Positives = 127/351 (36%), Gaps = 66/351 (18%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSR----ILFVSESV--VSGIIKNSLCVMDRDGAN 202
           A      H ++ D    +        S     I++   S    +      L ++  DG  
Sbjct: 22  AQAPATPHPMTIDDAFRVQNVGSPRVSPDGKWIVYTVSSTDLKADKRTTDLWMVGWDGKQ 81

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMI 260
              LT   D     P FSP+ + +++ +         +V+++D R   A +     +  +
Sbjct: 82  DMQLTFGYDGSTSSPEFSPDGRSISFLSGRKGTAKGTQVWVLDRRGGEARQLTDVKKGDL 141

Query: 261 LAPRFSSNGKRALIS--------------------------------------VQKDEAM 282
               +S + K  L++                                      +  D+  
Sbjct: 142 ENYAWSPDSKELLLTIHTGGTVSANDFNDPGKHKLIPPIVMTRYHFKQDVEGYLTADDHT 201

Query: 283 DIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFES------DREGKEQLYVMQSN- 334
            +Y  D+ +   E+LT     N S   +SPD  +I F S      DR     ++V+ +  
Sbjct: 202 YLYLYDIATGKMEKLTAGKQYNESDGVWSPDGKEIAFVSNHTAEPDRNINTDIFVVAAKH 261

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQE-RLLV 387
           G++ ++++    A      WSP G LIAF +    K+       +GV+  DGS   R+L 
Sbjct: 262 GAEPRQLTHYTGADAGPLSWSPDGKLIAFLRGGHVKYWQYQENHLGVIAADGSSPARILT 321

Query: 388 EDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPA 435
              +  + +P +S  G+S++     D +      S+D+  G    L+ T  
Sbjct: 322 SKFDRPVHSPQFSSDGKSIMVLVTDDRNRYPA--SVDVATGAVHRLVATEG 370



 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 96/297 (32%), Gaps = 65/297 (21%)

Query: 210 RDQILFEPRFSPNQQKVAYATYD-----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           R Q +  PR SP+ + + Y         D+    ++++     +  +    +     +P 
Sbjct: 38  RVQNVGSPRVSPDGKWIVYTVSSTDLKADKRTTDLWMVGWDGKQDMQLTFGYDGSTSSPE 97

Query: 265 FSSNGKRALISVQKDE---AMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES 320
           FS +G+       +        ++ +D +     +LT+    ++   ++SPDS +++   
Sbjct: 98  FSPDGRSISFLSGRKGTAKGTQVWVLDRRGGEARQLTDVKKGDLENYAWSPDSKELLLTI 157

Query: 321 DREGK--------------------------------------EQLYVMQSNGSDQKRIS 342
              G                                         LY+        ++++
Sbjct: 158 HTGGTVSANDFNDPGKHKLIPPIVMTRYHFKQDVEGYLTADDHTYLYLYDIATGKMEKLT 217

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKD-GSQERLLVE-DSNLQA 394
             K+ +  D VWSP G  IAF               I V+    G++ R L         
Sbjct: 218 AGKQYNESDGVWSPDGKEIAFVSNHTAEPDRNINTDIFVVAAKHGAEPRQLTHYTGADAG 277

Query: 395 P-TWSPSGRSLIFSRKKDGDTGSKLY------SIDLNGRNETLINTPAYASDPQWVG 444
           P +WSP G+ + F   + G      Y       I  +G +   I T  +   P    
Sbjct: 278 PLSWSPDGKLIAFL--RGGHVKYWQYQENHLGVIAADGSSPARILTSKFDR-PVHSP 331



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 60/174 (34%), Gaps = 14/174 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-----VYLMDT 244
              L + D     +  LT  +     +  +SP+ +++A+ +    +  R     ++++  
Sbjct: 200 HTYLYLYDIATGKMEKLTAGKQYNESDGVWSPDGKEIAFVSNHTAEPDRNINTDIFVVAA 259

Query: 245 RIDRAPKRIGNFRSMILAP-RFSSNGKRALI------SVQKDEAMDIYSVDLQSNATERL 297
           +    P+++ ++      P  +S +GK             + +   +  +    ++  R+
Sbjct: 260 KHGAEPRQLTHYTGADAGPLSWSPDGKLIAFLRGGHVKYWQYQENHLGVIAADGSSPARI 319

Query: 298 TNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
             + F     S  +S D   I+     +       +        R+   +  S+
Sbjct: 320 LTSKFDRPVHSPQFSSDGKSIMVLVTDDRNRYPASVDVATGAVHRLVATEGVSW 373



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 65/185 (35%), Gaps = 25/185 (13%)

Query: 128 FRLWDVKDRKQ---IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
             L+D+   K      GK++  S   W      I+     +   ++   N+ I  V+   
Sbjct: 203 LYLYDIATGKMEKLTAGKQYNESDGVWSPDGKEIAFVSNHTAEPDRNI-NTDIFVVAAKH 261

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                          GA  R LT           +SP+ + +A+         +      
Sbjct: 262 ---------------GAEPRQLTHYTGADAGPLSWSPDGKLIAFLRGGHVKYWQYQENHL 306

Query: 245 RI----DRAPKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            +      +P RI    F   + +P+FSS+GK  ++ V  D      SVD+ + A  RL 
Sbjct: 307 GVIAADGSSPARILTSKFDRPVHSPQFSSDGKSIMVLVTDDRNRYPASVDVATGAVHRLV 366

Query: 299 NTLFI 303
            T  +
Sbjct: 367 ATEGV 371


>gi|149370551|ref|ZP_01890240.1| WD40-like repeat/amidohydrolase domain protein [unidentified
           eubacterium SCB49]
 gi|149356102|gb|EDM44659.1| WD40-like repeat/amidohydrolase domain protein [unidentified
           eubacterium SCB49]
          Length = 1089

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 84/229 (36%), Gaps = 25/229 (10%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             V       +    +        +    S +G+  +     D   DIY++ +     + 
Sbjct: 27  WDVNNPGKDFNYKTHKFTTTEGTWMNLDVSPDGQTIVF----DMLGDIYTMPITGGKAKA 82

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +   +   +   +SPD   I F SD  G + ++ M ++G +  +++++      + VW  
Sbjct: 83  IRTGIAFEVQPRFSPDGKHISFTSDAGGGDNIWTMDASGDNATQVTKENFRLLNNAVWMA 142

Query: 357 QGDL-IAFTKFSGEKF----AIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFS 407
            G+  IA   FS  +      +    K G     L     +  ++  P  S  G+ + +S
Sbjct: 143 DGNYLIARKHFSSGRSLGAGELWQYHKTGGSGIQLTARKNDQQDVGEPFVSADGKYVYYS 202

Query: 408 RK--------KDGDTGSKLYSI---DL-NGRNETLINTPAYASDPQWVG 444
                      + D  S++Y I   DL  G+ ET+   P  A+ P    
Sbjct: 203 EDMYPGGFFQYNKDPNSQIYVIKRYDLETGKIETITGGPGGAARPTLSP 251



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 90/278 (32%), Gaps = 36/278 (12%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              T  +G + +  +      +   +   +  M   G   + +         +PRFSP+ 
Sbjct: 41  HKFTTTEGTWMNLDVSPDGQTIVFDMLGDIYTMPITGGKAKAIRTG-IAFEVQPRFSPDG 99

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD 279
           + +++ + D      ++ MD   D A +       ++    + ++G   +     S  + 
Sbjct: 100 KHISFTS-DAGGGDNIWTMDASGDNATQVTKENFRLLNNAVWMADGNYLIARKHFSSGRS 158

Query: 280 -EAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIV----------FESDREGK 325
             A +++       +  +LT   N          S D   +           F+ +++  
Sbjct: 159 LGAGELWQYHKTGGSGIQLTARKNDQQDVGEPFVSADGKYVYYSEDMYPGGFFQYNKDPN 218

Query: 326 EQLYVM---QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            Q+YV+          + I+         P  SP G  +AF K   EK  + +   +  +
Sbjct: 219 SQIYVIKRYDLETGKIETIT-GGPGGAARPTLSPDGKTLAFVKRVREKTVLYIHNLETGE 277

Query: 383 ERLLVED------------SNLQAPTWSPSGRSLIFSR 408
           E  + +                    W P+   ++F  
Sbjct: 278 EYPIYDTLNKDQQEAWAIFGVYPNFDWMPNNEDIVFWS 315



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 64/395 (16%), Positives = 133/395 (33%), Gaps = 65/395 (16%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F L++   +        +   F    SLGA  L   +  K G   +++  R    K+ +Q
Sbjct: 132 FRLLNNAVWMADGNYLIARKHFSSGRSLGAGELW--QYHKTGGSGIQLTAR----KNDQQ 185

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
            +G+ F S+   +          +Y S     G F         +         +   D 
Sbjct: 186 DVGEPFVSADGKY----------VYYSEDMYPGGF------FQYNKDPNSQIYVIKRYDL 229

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV---------YLMDTRIDRA 249
           +   I  +T         P  SP+ + +A+     E  +           Y +   +++ 
Sbjct: 230 ETGKIETITGGPGGAA-RPTLSPDGKTLAFVKRVREKTVLYIHNLETGEEYPIYDTLNKD 288

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISV-------------------QKDEAMDIYSVDLQ 290
            +       +     +  N +  +                      Q D  +D+      
Sbjct: 289 QQEAWAIFGVYPNFDWMPNNEDIVFWSGGTFQKINIKSLAVTNIPFQADVKIDLAQTVKT 348

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            +  +R T T  +   A  +PD   +VF +      ++Y  +       R++   +  Y 
Sbjct: 349 DSPIDRTTFTSKVIRDAITTPDGKTLVFNA----LGKIYKKELPNGTPTRLTTATDFEY- 403

Query: 351 DPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
           +P  +P G  I +  ++  EK AI  +  +G   + L  E    + P++S  G+ ++F +
Sbjct: 404 EPSLAPNGTDIVYVTWNDIEKGAIYKLNLNGGTPQKLTKEKGIYRTPSYSNDGKHIVFKK 463

Query: 409 KKDG-------DTGSKLYSIDLNGRNETLINTPAY 436
           +K            + +Y +  +G +E  +N    
Sbjct: 464 EKGNSDQGNSFTKNAGIYIMTADGTSEIKLNANGE 498



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 88/235 (37%), Gaps = 34/235 (14%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD- 279
           P+ + + +         ++Y  +   +  P R+         P  + NG   +     D 
Sbjct: 369 PDGKTLVFNALG-----KIYKKEL-PNGTPTRLTTATDFEYEPSLAPNGTDIVYVTWNDI 422

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREG----KEQLYV 330
           E   IY ++L     ++LT    I  + SYS D   IVF      SD+         +Y+
Sbjct: 423 EKGAIYKLNLNGGTPQKLTKEKGIYRTPSYSNDGKHIVFKKEKGNSDQGNSFTKNAGIYI 482

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVMKKDGSQER- 384
           M ++G+ + +++ + E     P ++     I F +  G  F      +  +   G+ ER 
Sbjct: 483 MTADGTSEIKLNANGEY----PRFNEDDSRI-FLQTGGTYFGNLTKKLISVNLKGNDERE 537

Query: 385 -LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            L+ + +N   P  SP  + + FS        + +  +   G+  TL        
Sbjct: 538 HLISKYANRIVP--SPDNKWVAFSNLHK----AYVAPMPQTGKPLTLDGNSNNVP 586



 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 56/327 (17%), Positives = 109/327 (33%), Gaps = 61/327 (18%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD--QILFEPRFSPNQQKVAYA 229
           D N  I     S    +    L    + G +   LT  ++  Q + EP  S + + V Y+
Sbjct: 143 DGNYLIARKHFSSGRSLGAGELWQYHKTGGSGIQLTARKNDQQDVGEPFVSADGKYVYYS 202

Query: 230 TYDDEDILRVYLMDTRI-----------DRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
                     Y  D                  + I         P  S +GK      + 
Sbjct: 203 EDMYPGGFFQYNKDPNSQIYVIKRYDLETGKIETITGGPGGAARPTLSPDGKTLAFVKRV 262

Query: 279 DEAMDIYSVDLQSNATERLTNTLFIN---------ISAS--YSPDSSQIVFESDREGKEQ 327
            E   +Y  +L++     + +TL  +         +  +  + P++  IVF S   G  Q
Sbjct: 263 REKTVLYIHNLETGEEYPIYDTLNKDQQEAWAIFGVYPNFDWMPNNEDIVFWS--GGTFQ 320

Query: 328 -LYVMQSNGSDQK--------------------RISQDKEASYFDPVWSPQGDLIAFTKF 366
            + +     ++                      R +   +    D + +P G  + F   
Sbjct: 321 KINIKSLAVTNIPFQADVKIDLAQTVKTDSPIDRTTFTSKV-IRDAITTPDGKTLVFNAL 379

Query: 367 SGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                 I   +  +G+  RL         P+ +P+G  +++    D + G+ +Y ++LNG
Sbjct: 380 G----KIYKKELPNGTPTRLTTATDFEYEPSLAPNGTDIVYVTWNDIEKGA-IYKLNLNG 434

Query: 426 RNETLIN-------TPAYASDPQWVGF 445
                +        TP+Y++D + + F
Sbjct: 435 GTPQKLTKEKGIYRTPSYSNDGKHIVF 461


>gi|116621073|ref|YP_823229.1| amidohydrolase [Candidatus Solibacter usitatus Ellin6076]
 gi|116224235|gb|ABJ82944.1| amidohydrolase [Candidatus Solibacter usitatus Ellin6076]
          Length = 1046

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 77/214 (35%), Gaps = 12/214 (5%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            +        SP+++ +        D+            A +R+         P FS  G
Sbjct: 83  SEGTNLGATVSPDRKTIIL------DLQTALWALPFEGGAARRLTEPELEASRPDFSPTG 136

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQ 327
                         I+ +    +    LT     +     SPD ++I F SDR   G   
Sbjct: 137 SLIAFQSFSGGTFHIWVMKPDGSGRRELTEGHGDDRDPRVSPDGARIAFSSDRAMKGNYD 196

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           ++ ++       + + D    Y +P WSP G  IA+   +G      +  K G Q R+++
Sbjct: 197 IWTVEVATGKLAQWTSDPSDEY-EPAWSPDGMEIAYVSGAGAIGHAVLAAKAGGQPRVII 255

Query: 388 ---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              + S + AP+WSP G+ + + +         +
Sbjct: 256 EAPDGSKVNAPSWSPDGKQIAYVQTTANKLRLLI 289



 Score =  126 bits (316), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 60/345 (17%), Positives = 110/345 (31%), Gaps = 75/345 (21%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
             +   + DF+     ++    SG     + VM  DG+  R LT        +PR SP+ 
Sbjct: 123 PELEASRPDFSPTGSLIAFQSFSGGT-FHIWVMKPDGSGRRELTEGHGD-DRDPRVSPDG 180

Query: 224 QKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            ++A+++    +    ++ ++    +  +   +  S    P +S +G             
Sbjct: 181 ARIAFSSDRAMKGNYDIWTVEVATGKLAQW-TSDPSDEYEPAWSPDGMEIAYVSGAGAIG 239

Query: 283 DIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFE------------------- 319
                         +      + S     S+SPD  QI +                    
Sbjct: 240 HAVLAAKAGGQPRVII--EAPDGSKVNAPSWSPDGKQIAYVQTTANKLRLLISGKQVGSA 297

Query: 320 ------------SDR---EGKEQLYVMQSNGSDQK-----------RISQDKEASYFD-- 351
                       + R    G  +++  Q   +  +           R +  +    FD  
Sbjct: 298 EDVFPFPAVWLSATRILYTGNGKIWKTQLATNTTENVPFKAAFAVNRAAYKRNVPDFDTT 357

Query: 352 ----------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                     P  SP G  I F   +     + +M+  G    L  +    Q P WSP G
Sbjct: 358 APRTAKGILAPALSPDGKRIVFEALN----QLWLMEIGGEATPLTNDGYYKQTPVWSPDG 413

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
           + + +S  K+G   + +Y +DL  + E  +     A A DP W  
Sbjct: 414 KRIAYSSDKNGT--ANVYILDLATQAEKRVTNLHEAAALDPVWSP 456



 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 58/325 (17%), Positives = 115/325 (35%), Gaps = 72/325 (22%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +  ++   + ++    +G I +++      G     +       +  P +SP+ +++AY 
Sbjct: 219 EPAWSPDGMEIAYVSGAGAIGHAVLAAKAGGQPRVIIEAPDGSKVNAPSWSPDGKQIAYV 278

Query: 230 ------------------------------------TYDDEDILRVYLMDTRIDRAP--- 250
                                                  +  I +  L     +  P   
Sbjct: 279 QTTANKLRLLISGKQVGSAEDVFPFPAVWLSATRILYTGNGKIWKTQLATNTTENVPFKA 338

Query: 251 ----------KRIGNFRSM-------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                     + + +F +        ILAP  S +GKR +          ++ +++    
Sbjct: 339 AFAVNRAAYKRNVPDFDTTAPRTAKGILAPALSPDGKRIVFEA----LNQLWLMEI-GGE 393

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              LTN  +   +  +SPD  +I + SD+ G   +Y++      +KR++   EA+  DPV
Sbjct: 394 ATPLTNDGYYKQTPVWSPDGKRIAYSSDKNGTANVYILDLATQAEKRVTNLHEAAALDPV 453

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL------IFS 407
           WSP G  IAF    G      +    G    ++        P+WS +G+ L       ++
Sbjct: 454 WSPDGTQIAFQTQEGTVHIADL--ASGGSREVIRTTFEPGRPSWSKNGKVLSLAVLRAYT 511

Query: 408 -RKKDGDTGSKLYSIDLNGRNETLI 431
            R ++G   S + + DL    + L 
Sbjct: 512 KRYREGT--SLILTADLQSGKQVLT 534



 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 99/258 (38%), Gaps = 42/258 (16%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  P  SP+ +++ +   +        L    I      + N       P +S +GKR  
Sbjct: 365 ILAPALSPDGKRIVFEALNQ-------LWLMEIGGEATPLTNDGYYKQTPVWSPDGKRIA 417

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            S  K+   ++Y +DL + A +R+TN      +   +SPD +QI F++       +++  
Sbjct: 418 YSSDKNGTANVYILDLATQAEKRVTNLHEAAALDPVWSPDGTQIAFQTQEG---TVHIAD 474

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLI------AFT-KFSGEKFAIGVMKKDGSQERL 385
                 + + +        P WS  G ++      A+T ++      I        ++ L
Sbjct: 475 LASGGSREVIRTTFEP-GRPSWSKNGKVLSLAVLRAYTKRYREGTSLILTADLQSGKQVL 533

Query: 386 L-------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS--IDLNG--------RNE 428
                   +   ++  P +SP G  + +           L+   +D NG         NE
Sbjct: 534 TEPAPYKSITTRSIDGPIYSPDGTRMAYVMD------DYLWVRPVDANGLPVSEARPINE 587

Query: 429 TLINTPAYASDPQWVGFM 446
            + + P++++D + + ++
Sbjct: 588 EMTDAPSWSADGKRMLYL 605



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 94/266 (35%), Gaps = 33/266 (12%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N L +M+  G        +       P +SP+ +++AY++ D      VY++D       
Sbjct: 383 NQLWLMEIGGE--ATPLTNDGYYKQTPVWSPDGKRIAYSS-DKNGTANVYILDLATQAEK 439

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +      +  L P +S +G +     Q+     ++  DL S  +  +  T F     S+S
Sbjct: 440 RVTNLHEAAALDPVWSPDGTQIAFQTQEG---TVHIADLASGGSREVIRTTFEPGRPSWS 496

Query: 311 PDSSQI------VFE-SDREGKEQLYVMQSNGSDQKRISQDKE-----ASYFDPVWSPQG 358
            +   +       +    REG   +         Q              S   P++SP G
Sbjct: 497 KNGKVLSLAVLRAYTKRYREGTSLILTADLQSGKQVLTEPAPYKSITTRSIDGPIYSPDG 556

Query: 359 DLIAFTKFSGEKFAIGV--MKKDG--SQERLLVEDSNLQAPTWSPSGRSLIFSR------ 408
             +A+         + V  +  +G    E   + +    AP+WS  G+ +++        
Sbjct: 557 TRMAYVMDD----YLWVRPVDANGLPVSEARPINEEMTDAPSWSADGKRMLYLSAGTLRM 612

Query: 409 -KKDGDTGSKLYSIDLNGRNETLINT 433
            + DG T      ++L  R +    T
Sbjct: 613 IEADGKTPPVTVPVNLTWRRQERTKT 638



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 48/245 (19%), Positives = 91/245 (37%), Gaps = 36/245 (14%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           +D Y   T        RI + S+   +      + ++D      + +T   +    +P +
Sbjct: 399 NDGYYKQTPVWSPDGKRIAYSSDKNGTAN----VYILDLATQAEKRVTNLHEAAALDPVW 454

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--- 276
           SP+  ++A+ T   E  + +  + +   R   R          P +S NGK   ++V   
Sbjct: 455 SPDGTQIAFQT--QEGTVHIADLASGGSREVIRTTFEPGR---PSWSKNGKVLSLAVLRA 509

Query: 277 ----QKDEAMDIYSVDLQSNATERLT--------NTLFINISASYSPDSSQIVFESDREG 324
                ++    I + DLQS   + LT         T  I+    YSPD +++ +  D   
Sbjct: 510 YTKRYREGTSLILTADLQSGK-QVLTEPAPYKSITTRSID-GPIYSPDGTRMAYVMD--- 564

Query: 325 KEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            + L+V  + +NG          E     P WS  G  + +         + +++ DG  
Sbjct: 565 -DYLWVRPVDANGLPVSEARPINEEMTDAPSWSADGKRMLYLSAG----TLRMIEADGKT 619

Query: 383 ERLLV 387
             + V
Sbjct: 620 PPVTV 624



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 37/111 (33%), Gaps = 7/111 (6%)

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                  + I+   E +      SP    I     +    A+  +  +G   R L E   
Sbjct: 71  DPAPGVARSIT-VSEGTNLGATVSPDRKTIILDLQT----ALWALPFEGGAARRLTEPEL 125

Query: 392 LQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             + P +SP+G  + F     G     +   D +GR E L        DP+
Sbjct: 126 EASRPDFSPTGSLIAFQSFSGGTFHIWVMKPDGSGRRE-LTEGHGDDRDPR 175


>gi|52841869|ref|YP_095668.1| acylaminoacyl peptidase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52628980|gb|AAU27721.1| acylaminoacyl peptidase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 659

 Score =  132 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/306 (20%), Positives = 114/306 (37%), Gaps = 58/306 (18%)

Query: 195 VMDRDGANIRYLTP----SRDQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTR 245
           V+  DG   + L       R Q + EP  SP+ + VAY               V+ +   
Sbjct: 16  VVFHDGWAGKRLPELDDLYRIQDISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVD 75

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFI 303
              + +      S    P++S NGK         K+    I+   +Q N   +LT+    
Sbjct: 76  SKSSQRITFAEDSSSSLPKWSPNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTHIDGE 135

Query: 304 NISASYSPDSSQIVFESDRE---------------------------GKEQLYVMQSNGS 336
               ++SPDS++I F + +                            G++ LY+++    
Sbjct: 136 VSDFTWSPDSNRIAFIAQKSVPSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSK 195

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKK-DGSQERLLVE- 388
              +++ D     + P WSP G  IAF    G+       + I +++   G++ER L   
Sbjct: 196 AITQLT-DGNHDEYLPAWSPDGKYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKERQLTHF 254

Query: 389 DSNLQAP------TWSPSGRSLIFSRKKDGDTG----SKLYSIDLNGRNETLI-NTPAYA 437
             +   P      +WSP    + + R  +        ++L  ID+N ++E +I     + 
Sbjct: 255 SGSDMNPDYDSNLSWSPDSSKIAYLRSNEHQWTYYSPNQLAIIDINTKDEKIIAPRDNWY 314

Query: 438 SDPQWV 443
             P+W 
Sbjct: 315 YKPKWS 320



 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 102/291 (35%), Gaps = 47/291 (16%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           DI +      G + +  +    +    I    +  +  D  + + +T + D     P++S
Sbjct: 38  DISEPDLSPDGKWVAYTV-SQLNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPKWS 96

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD- 279
           PN + +AY +   ++      + +  D    ++ +    +    +S +  R     QK  
Sbjct: 97  PNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTHIDGEVSDFTWSPDSNRIAFIAQKSV 156

Query: 280 --------------------------EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                                         +Y V+L+S A  +LT+        ++SPD 
Sbjct: 157 PSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYLPAWSPDG 216

Query: 314 SQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDP------VWSPQGDLI 361
             I F +      DR     +Y+++     ++R       S  +P       WSP    I
Sbjct: 217 KYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKERQLTHFSGSDMNPDYDSNLSWSPDSSKI 276

Query: 362 AFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLI 405
           A+ + +  ++       + ++  +   E+++    N    P WS  G+ + 
Sbjct: 277 AYLRSNEHQWTYYSPNQLAIIDINTKDEKIIAPRDNWYYKPKWSQDGKFIY 327



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 63/182 (34%), Gaps = 41/182 (22%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               SPD   + +        D     +++ +  +    +RI+  +++S   P WSP G 
Sbjct: 41  EPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPKWSPNGK 100

Query: 360 LIAFTKFSG--EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD----- 411
            +A+    G      I +     ++E  L   D  +   TWSP    + F  +K      
Sbjct: 101 WLAYLSDGGKEGTTQIWIASVQDNKEHQLTHIDGEVSDFTWSPDSNRIAFIAQKSVPSNE 160

Query: 412 --------------------GDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVG 444
                               G     LY ++L  +  T +         PA++ D +++ 
Sbjct: 161 EEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYLPAWSPDGKYIA 220

Query: 445 FM 446
           F+
Sbjct: 221 FV 222



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 32/68 (47%), Gaps = 12/68 (17%)

Query: 391 NLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLIN--------TPAYAS 438
           ++  P  SP G+ + ++  +    D  + ++++ + ++ ++   I          P ++ 
Sbjct: 38  DISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPKWSP 97

Query: 439 DPQWVGFM 446
           + +W+ ++
Sbjct: 98  NGKWLAYL 105


>gi|311745254|ref|ZP_07719039.1| amidohydrolase family protein [Algoriphagus sp. PR1]
 gi|126577782|gb|EAZ82002.1| amidohydrolase family protein [Algoriphagus sp. PR1]
          Length = 1209

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/208 (21%), Positives = 82/208 (39%), Gaps = 23/208 (11%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             +   ++   S +GK     +  D    IY++ ++      +T  +       YSPD +
Sbjct: 69  TSQGTWMSVDVSPDGKSLAFDLLGD----IYTIPIEGGKASPITTGMAYETHPRYSPDGT 124

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +I+F SDR G + L+ +  +  D  +I++DK        W+P  + I   K       + 
Sbjct: 125 KILFTSDRAGSDNLWYIDMDKKDTVQITKDKNGDVPGADWTPDSEYIVVAKGR-RITKLW 183

Query: 375 VMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTG-------SKLYSIDLN 424
           +  KDG     L E+        P  SP G+ + FS ++ G           ++ + D +
Sbjct: 184 MYHKDGGGGIQLNENPGSIKTIDPFVSPDGKKVYFS-QRSGSWNYNALLPQYQIGTYDFD 242

Query: 425 GRNETLIN-------TPAYASDPQWVGF 445
                 I        TP  + D +W+ +
Sbjct: 243 KGELNTITSRYGSAFTPTLSDDGKWMVY 270



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 57/301 (18%), Positives = 103/301 (34%), Gaps = 45/301 (14%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQI-LFEPRFSPNQQKVAYA----TYDDEDILR 238
           V  G     L +  +DG     L  +   I   +P  SP+ +KV ++    +++   +L 
Sbjct: 173 VAKGRRITKLWMYHKDGGGGIQLNENPGSIKTIDPFVSPDGKKVYFSQRSGSWNYNALLP 232

Query: 239 VYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            Y + T      +   I +       P  S +GK  +   + +E   +   +++S   + 
Sbjct: 233 QYQIGTYDFDKGELNTITSRYGSAFTPTLSDDGKWMVYGSRWEEKTGLVLRNIESGEEKW 292

Query: 297 LTNTLFINISASYSPDS--SQIVFESDR-----EGKEQLYVMQSNGSDQKRISQDKEASY 349
           L   +  +   S +P      + F  D          +++ +  +G     I  + + + 
Sbjct: 293 LAYPVQRDEQESIAPQGVLPAMAFTPDSKNVITSYGGKIWKIAVDGGTPTEIPFEVDVNL 352

Query: 350 -----------------------FDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERL 385
                                   D   SP G  +AFT  +     + VM   +G   R+
Sbjct: 353 AMGPRLYFNYEIKDTTAARATQIRDAAPSPDGKKLAFTALN----RLYVMDYPEGEPRRV 408

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN--ETLINTPAYASDPQWV 443
              D     PTWSP G  L F    + + G +L+   L   N    L +  A    P W 
Sbjct: 409 TDNDFTEAMPTWSPDGSQLAFVGWDESEGG-QLFKASLGNTNTVTKLSSEKALYMQPAWG 467

Query: 444 G 444
            
Sbjct: 468 P 468



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 90/210 (42%), Gaps = 18/210 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +A+    D     +Y +     +A   I    +    PR+S +G + L +  + 
Sbjct: 80  SPDGKSLAFDLLGD-----IYTIPIEGGKAS-PITTGMAYETHPRYSPDGTKILFTSDRA 133

Query: 280 EAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            + +++ +D+    T ++T     ++  A ++PDS  IV    R    +L++   +G   
Sbjct: 134 GSDNLWYIDMDKKDTVQITKDKNGDVPGADWTPDSEYIVVAKGRRIT-KLWMYHKDGGGG 192

Query: 339 KRISQD-KEASYFDPVWSPQGDLIAFTKFSGE--------KFAIGVMKKDGSQERLLVED 389
            +++++       DP  SP G  + F++ SG         ++ IG    D  +   +   
Sbjct: 193 IQLNENPGSIKTIDPFVSPDGKKVYFSQRSGSWNYNALLPQYQIGTYDFDKGELNTITSR 252

Query: 390 -SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +   PT S  G+ +++  + +  TG  L
Sbjct: 253 YGSAFTPTLSDDGKWMVYGSRWEEKTGLVL 282



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/293 (14%), Positives = 98/293 (33%), Gaps = 38/293 (12%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G + S  +      ++  +   +  +  +G     +T         PR+SP+  K+ + 
Sbjct: 71  QGTWMSVDVSPDGKSLAFDLLGDIYTIPIEGGKASPITTG-MAYETHPRYSPDGTKILFT 129

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D      ++ +D       +   +    +    ++ + +  +++ +      ++    
Sbjct: 130 S-DRAGSDNLWYIDMDKKDTVQITKDKNGDVPGADWTPDSEYIVVA-KGRRITKLWMYHK 187

Query: 290 QSNATERLTNTLF----INISASYSPDSSQIVFESDREGK---------EQLYVMQSNGS 336
                 +L         I+     SPD  ++ F S R G           Q+     +  
Sbjct: 188 DGGGGIQLNENPGSIKTID--PFVSPDGKKVYF-SQRSGSWNYNALLPQYQIGTYDFDKG 244

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL---------- 386
           +   I+  +  S F P  S  G  + +     EK  + +   +  +E+ L          
Sbjct: 245 ELNTITS-RYGSAFTPTLSDDGKWMVYGSRWEEKTGLVLRNIESGEEKWLAYPVQRDEQE 303

Query: 387 --VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                  L A  ++P  +++I S       G K++ I ++G   T I      
Sbjct: 304 SIAPQGVLPAMAFTPDSKNVITSY------GGKIWKIAVDGGTPTEIPFEVDV 350



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 95/293 (32%), Gaps = 56/293 (19%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY--------- 240
           +  +   D D   +  +T SR    F P  S + + + Y +  +E    V          
Sbjct: 233 QYQIGTYDFDKGELNTIT-SRYGSAFTPTLSDDGKWMVYGSRWEEKTGLVLRNIESGEEK 291

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--- 297
            +   + R  +     + ++ A  F+ + K  + S        I+ + +       +   
Sbjct: 292 WLAYPVQRDEQESIAPQGVLPAMAFTPDSKNVITSY----GGKIWKIAVDGGTPTEIPFE 347

Query: 298 --------------------TNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                               T      I  A+ SPD  ++ F +      +LYVM     
Sbjct: 348 VDVNLAMGPRLYFNYEIKDTTAARATQIRDAAPSPDGKKLAFTA----LNRLYVMDYPEG 403

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMKKDGSQERLLVEDSNLQ 393
           + +R++ D + +   P WSP G  +AF  +    G +     +    +  +L  E +   
Sbjct: 404 EPRRVT-DNDFTEAMPTWSPDGSQLAFVGWDESEGGQLFKASLGNTNTVTKLSSEKALYM 462

Query: 394 APTWSPSGRSLIFSRKKD----------GDTGSKLYSIDLNGRNETLINTPAY 436
            P W P+ R  +F                 + ++L  I  NG     I     
Sbjct: 463 QPAWGPNNRIAVFKASNQVMKDAEGPGINGSEAELVWIPANGGEFRKIMEAGN 515



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 64/161 (39%), Gaps = 17/161 (10%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N L VMD      R +T   D     P +SP+  ++A+  +D+ +  +++          
Sbjct: 393 NRLYVMDYPEGEPRRVTD-NDFTEAMPTWSPDGSQLAFVGWDESEGGQLFKASLGNTNTV 451

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQ------------KDEAMDIYSVDLQSNATERLT 298
            ++ + +++ + P +  N + A+                     ++  +        ++ 
Sbjct: 452 TKLSSEKALYMQPAWGPNNRIAVFKASNQVMKDAEGPGINGSEAELVWIPANGGEFRKIM 511

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                + +  ++ D+S+ VF +   G   L  ++ +G+D+K
Sbjct: 512 -EAGNHGNVHFTKDTSR-VFLNGPGGT--LLSVRWDGTDEK 548


>gi|332140282|ref|YP_004426020.1| acylaminoacyl-peptidase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550304|gb|AEA97022.1| acylaminoacyl-peptidase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 685

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 109/277 (39%), Gaps = 36/277 (12%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           I +V  S    S   + ++ +   DG + R L  S+    +  R+SP+  ++AY + ++ 
Sbjct: 57  IAYVRRSNDIMSDSSRANVWLASVDGKSHRPLLSSKKNY-YSIRWSPDGSRLAYLSNEEG 115

Query: 235 DI-LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              L V  MDT        + +  S I    +S +GK    ++  D         L    
Sbjct: 116 KPQLYVRWMDTGQTALVTNVTSSPSNI---TWSPDGKYIAFTMSVDAKEK----PLDVKM 168

Query: 294 TERLTNTLFINISASYSPDSSQIV---FESDREG-----KEQLYVMQSNGSDQKRISQDK 345
            ++          A +SP    I    +++D +G        ++++ S+G   ++++   
Sbjct: 169 PKK-------PEGAKWSPKFQYITKARYQADGKGVLDPAYTHIFIVPSDGGTARQLTSGN 221

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFA-------IGVMKKDGSQERLLVEDSNLQAPTWS 398
                   ++P G+ I F+    + +        I  +   G+ E+L  +     +P  S
Sbjct: 222 YHHNGRLSFAPNGEKIYFSANRSDNWEYEPVEADIFSVDMTGNIEQLTQDKGRESSPVVS 281

Query: 399 PSGRSLIFSRKKDGD---TGSKLYSIDLNGRNETLIN 432
           P G+ + ++ + D       S LY ++ +G  +  I 
Sbjct: 282 PDGKYIAYAYRDDEKVMYKNSYLYVMNSDGSEQRNIT 318



 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 83/235 (35%), Gaps = 55/235 (23%)

Query: 260 ILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           +   + S NGK      + ++        +++   +   +   L ++     S  +SPD 
Sbjct: 45  VSEVQVSPNGKNIAYVRRSNDIMSDSSRANVWLASVDGKSHRPLLSSKKNYYSIRWSPDG 104

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--------- 364
           S++ + S+ EGK QLYV   +      ++     S  +  WSP G  IAFT         
Sbjct: 105 SRLAYLSNEEGKPQLYVRWMDTGQTALVTNVTS-SPSNITWSPDGKYIAFTMSVDAKEKP 163

Query: 365 -------KFSGEKF-------------------------AIGVMKKDGSQERLLVEDSNL 392
                  K  G K+                          I ++  DG   R L   +  
Sbjct: 164 LDVKMPKKPEGAKWSPKFQYITKARYQADGKGVLDPAYTHIFIVPSDGGTARQLTSGNYH 223

Query: 393 QAP--TWSPSGRSLIFSRKKDGDTGSK-----LYSIDLNGRNETLINTPAYASDP 440
                +++P+G  + FS  +  +   +     ++S+D+ G  E L       S P
Sbjct: 224 HNGRLSFAPNGEKIYFSANRSDNWEYEPVEADIFSVDMTGNIEQLTQDKGRESSP 278



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 91/242 (37%), Gaps = 24/242 (9%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSL-------CVMDRDGANIRYLTPSRDQILFEPRFS 220
            E   ++ +  +++++      K  L        ++  DG   R LT           F+
Sbjct: 172 PEGAKWSPKFQYITKARYQADGKGVLDPAYTHIFIVPSDGGTARQLTSGNYHHNGRLSFA 231

Query: 221 PNQQKVAYATYDDED----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PN +K+ ++    ++     +   +    +    +++   +    +P  S +GK    + 
Sbjct: 232 PNGEKIYFSANRSDNWEYEPVEADIFSVDMTGNIEQLTQDKGRESSPVVSPDGKYIAYAY 291

Query: 277 QKDE-----AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           + DE        +Y ++   +    +T  +  ++S  +  D+ +I F+    G  Q+ V+
Sbjct: 292 RDDEKVMYKNSYLYVMNSDGSEQRNITKDIDNSVSNFHWKDNKRIYFQQSVRGLAQVDVV 351

Query: 332 QSNGSDQKRISQDKEASYFDP----VWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLL 386
             +GS +         +   P     +   GD++A+TK  +     + V      +ER L
Sbjct: 352 SLSGSVKAVAKGLGGTTLGRPYVFGTYHAVGDVVAYTKGRTDRPADLFV---TTRKERQL 408

Query: 387 VE 388
             
Sbjct: 409 TA 410


>gi|221209643|ref|ZP_03582624.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Burkholderia multivorans CGD1]
 gi|221170331|gb|EEE02797.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Burkholderia multivorans CGD1]
          Length = 675

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 52/312 (16%), Positives = 116/312 (37%), Gaps = 60/312 (19%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +    +   +++L ++  DG+         +     PR+ P +Q +A+ + D     +++
Sbjct: 34  TPDRDADDYRSALWLVCVDGSRPPRQLTFGN-ADSHPRWCPGEQALAFLS-DRGSGRQIH 91

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--------------------------- 273
            + T      + + +  S +++  +S +GK+ L                           
Sbjct: 92  AIRTD-GGEARCVTDLPSGVMSFEWSPDGKQLLALCTISVDPEQRGNTQDDSDEAADRPA 150

Query: 274 ---------------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                          +    D  + ++++D Q+ A+ RLT   F    A +SPD  +I F
Sbjct: 151 DAPRVVWRLPYKLDGVGYTLDTEIHLHTIDAQTGASRRLTRGSFEVSEADWSPDGKRIAF 210

Query: 319 ESDREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---KFSGEKF 371
              R+G    +  ++V+ ++G + ++++    AS   P WSP G  IA          + 
Sbjct: 211 TRTRDGRFAHRTDVWVVDADGGNARQLTS-TIASAAFPRWSPDGRFIALIGSEHDGDAQM 269

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            + +        R L +D +++  +     WS     L F   + G       ++  +G 
Sbjct: 270 HLWLHDVRTGDTRALGDD-DIEVVSGRTVFWSHDSTRLYFVLARHGRQEVASIAVP-DGT 327

Query: 427 NETLINTPAYAS 438
            + ++      S
Sbjct: 328 LQRVVTGDRQVS 339



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 101/273 (36%), Gaps = 19/273 (6%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D KQ++     S     R      SD+                  +     +   +  L 
Sbjct: 118 DGKQLLALCTISVDPEQRGNTQDDSDEAADRPADAPRVVWRLPYKLDGVGYTLDTEIHLH 177

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV--YLMDTRIDRAPKR 252
            +D      R LT    ++     +SP+ +++A+    D          +        ++
Sbjct: 178 TIDAQTGASRRLTRGSFEVSEA-DWSPDGKRIAFTRTRDGRFAHRTDVWVVDADGGNARQ 236

Query: 253 IGNFRSMILAPRFSSNGKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFINISAS- 308
           + +  +    PR+S +G+   +       D  M ++  D+++  T  L +     +S   
Sbjct: 237 LTSTIASAAFPRWSPDGRFIALIGSEHDGDAQMHLWLHDVRTGDTRALGDDDIEVVSGRT 296

Query: 309 --YSPDSSQIVFESDREGKEQL-YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             +S DS+++ F   R G++++  +   +G+ Q+ ++ D++ S F    S +G  + +T 
Sbjct: 297 VFWSHDSTRLYFVLARHGRQEVASIAVPDGTLQRVVTGDRQVSQF--ALSAKG--LLYTS 352

Query: 366 FSGEK-FAIGVMKKDGSQERLLVEDSNLQAPTW 397
                   +     DGS ER L +      P W
Sbjct: 353 DDARTPADVWSAALDGSGERRLTD----FNPWW 381



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 74/187 (39%), Gaps = 10/187 (5%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI F          +  + V+D DG N R LT +     F PR+SP+ + +A    + + 
Sbjct: 207 RIAFTRTRDGRFAHRTDVWVVDADGGNARQLTSTIASAAF-PRWSPDGRFIALIGSEHDG 265

Query: 236 ILRVYLMDTRI-DRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQS 291
             +++L    +     + +G+    +++ R   +S +  R    + +    ++ S+ +  
Sbjct: 266 DAQMHLWLHDVRTGDTRALGDDDIEVVSGRTVFWSHDSTRLYFVLARHGRQEVASIAVPD 325

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYF 350
              +R+          + S     +++ SD       ++    +GS ++R++      ++
Sbjct: 326 GTLQRVVTGDRQVSQFALSAKG--LLYTSDDARTPADVWSAALDGSGERRLT--DFNPWW 381

Query: 351 DPVWSPQ 357
                P 
Sbjct: 382 RDRTMPD 388


>gi|329889101|ref|ZP_08267444.1| mdsD protein [Brevundimonas diminuta ATCC 11568]
 gi|328844402|gb|EGF93966.1| mdsD protein [Brevundimonas diminuta ATCC 11568]
          Length = 1090

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 79/207 (38%), Gaps = 26/207 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               +A   S +G+  +  +  D    IY + +       + + +  ++   YSPD   I
Sbjct: 52  EGTWMALDVSPDGREIIFDLLGD----IYVMPIGGGEARPIASGVAWDMQPRYSPDGRFI 107

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKF 371
            F SDR G + L+VM  +GS+ +++S +       P W+P    I       +  S    
Sbjct: 108 AFTSDRAGGDNLWVMDRDGSNPRQVSSETFRLLNSPAWTPDSQFIVGRKHFTSSRSLGAG 167

Query: 372 AIGVMKKDGS--QERLL---VEDSNLQAPTWSPSGRSLIFS--RKKDG------DTGSKL 418
            + +  + G     +L     +  +   P +SP GR + FS      G      D  ++L
Sbjct: 168 EMWMYHRSGGGSGVQLTERRTQQKDTGEPAFSPDGRYMYFSDESTPGGVFEYSKDPNTQL 227

Query: 419 YSIDL----NGRNETLINTPAYASDPQ 441
           Y I       G  +  +  P  +  P 
Sbjct: 228 YVIRRLDRETGEIKPFVTGPGGSVRPT 254



 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 59/362 (16%), Positives = 112/362 (30%), Gaps = 98/362 (27%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATYD 232
           I F S+          L VMDRDG+N R ++    ++L  P ++P+ Q +     + +  
Sbjct: 107 IAFTSDRAGGDN----LWVMDRDGSNPRQVSSETFRLLNSPAWTPDSQFIVGRKHFTSSR 162

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALIS----------VQKD 279
                 +++       +  ++   R+       P FS +G+    S            KD
Sbjct: 163 SLGAGEMWMYHRSGGGSGVQLTERRTQQKDTGEPAFSPDGRYMYFSDESTPGGVFEYSKD 222

Query: 280 EAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
               +Y +   D ++   +        ++  + SPD   + F      +  LYVM     
Sbjct: 223 PNTQLYVIRRLDRETGEIKPFVTGPGGSVRPTPSPDGKSLAFVRRDRYQSTLYVMDLESG 282

Query: 337 DQKRI----------SQDKEASYFDPVWSPQGDLIAF----------------------- 363
            +  I          +      Y    W+P    I                         
Sbjct: 283 RETPIYDALDRDMQETWAIHGVYPGFAWTPDNGSIVIWAGGKIRRIDVASKAVSEVPFRV 342

Query: 364 -------------TKFSGEKFAIGVMK-----KDGSQ---------------------ER 384
                           +  +F + +++      DGS+                      R
Sbjct: 343 TDTRRVQETARFPVDVAPAQFDVKMIRWAQTSPDGSKVVFEALGNLWVRDLRNGVAGTPR 402

Query: 385 LLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            L   S+     P+WS  GRS++++   D + GS        G   T+   P +  +P++
Sbjct: 403 RLTRQSDHFELYPSWSRDGRSIVYTTWNDENLGSIRVVPVAGGEGRTITTNPGHYLEPRF 462

Query: 443 VG 444
             
Sbjct: 463 SP 464



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 101/235 (42%), Gaps = 31/235 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +++ +    D     +Y+M        + I +  +  + PR+S +G+    +  + 
Sbjct: 61  SPDGREIIFDLLGD-----IYVMPIG-GGEARPIASGVAWDMQPRYSPDGRFIAFTSDRA 114

Query: 280 EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVMQS 333
              +++ +D   +   ++++  F +  S +++PDS  IV    F S R  G  ++++   
Sbjct: 115 GGDNLWVMDRDGSNPRQVSSETFRLLNSPAWTPDSQFIVGRKHFTSSRSLGAGEMWMYHR 174

Query: 334 NGSDQK-RIS--QDKEASYFDPVWSPQGDLIAFT--KFSGEKFA-----------IGVMK 377
           +G     +++  + ++    +P +SP G  + F+     G  F            I  + 
Sbjct: 175 SGGGSGVQLTERRTQQKDTGEPAFSPDGRYMYFSDESTPGGVFEYSKDPNTQLYVIRRLD 234

Query: 378 KDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           ++  + +  +        PT SP G+SL F R+      S LY +DL    ET I
Sbjct: 235 RETGEIKPFVTGPGGSVRPTPSPDGKSLAFVRRD--RYQSTLYVMDLESGRETPI 287



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 74/201 (36%), Gaps = 18/201 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQK 278
           SP+  KV +    +   L V  +   +   P+R+        L P +S +G+  + +   
Sbjct: 374 SPDGSKVVFEALGN---LWVRDLRNGVAGTPRRLTRQSDHFELYPSWSRDGRSIVYTTWN 430

Query: 279 DEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---------EQL 328
           DE +  I  V +       +T      +   +SPD   +V+ +  +G            +
Sbjct: 431 DENLGSIRVVPVAGGEGRTITTNPGHYLEPRFSPDGQTVVYRTSSDGYLRSAMWSREPGV 490

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y +   G +  +++        +P +  + D I      G+K  +  +   G  ER  + 
Sbjct: 491 YRVSVRGGEPVKVTDSG----ANPQFGARNDRIFLADRDGDKRVLKSVNLSGEDERTHLS 546

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
                  + SP  R + ++ +
Sbjct: 547 SEWAAEFSISPDERWIAWTER 567



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 98/271 (36%), Gaps = 37/271 (13%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           ++G + +  +      +   +   + VM   G   R +  S      +PR+SP+ + +A+
Sbjct: 51  DEGTWMALDVSPDGREIIFDLLGDIYVMPIGGGEARPI-ASGVAWDMQPRYSPDGRFIAF 109

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN-----GKRALISVQKDEAMD 283
            + D      +++MD       +       ++ +P ++ +     G++   S +   A +
Sbjct: 110 TS-DRAGGDNLWVMDRDGSNPRQVSSETFRLLNSPAWTPDSQFIVGRKHFTSSRSLGAGE 168

Query: 284 IYSVDLQSNA-----TERLTNTLFINISASYSPDSSQIVFE--SDREG--------KEQL 328
           ++             TER T         ++SPD   + F   S   G          QL
Sbjct: 169 MWMYHRSGGGSGVQLTERRTQQKDT-GEPAFSPDGRYMYFSDESTPGGVFEYSKDPNTQL 227

Query: 329 YVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           YV++    +   I            P  SP G  +AF +    +  + VM  +  +E  +
Sbjct: 228 YVIRRLDRETGEIKPFVTGPGGSVRPTPSPDGKSLAFVRRDRYQSTLYVMDLESGRETPI 287

Query: 387 VE--DSNLQA----------PTWSPSGRSLI 405
            +  D ++Q             W+P   S++
Sbjct: 288 YDALDRDMQETWAIHGVYPGFAWTPDNGSIV 318



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 102/289 (35%), Gaps = 54/289 (18%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--------FEP--RFSPNQQKVAYATYDD 233
           V     +++L VMD +      +  + D+ +          P   ++P+   +    +  
Sbjct: 265 VRRDRYQSTLYVMDLESGRETPIYDALDRDMQETWAIHGVYPGFAWTPDNGSIVI--WAG 322

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-------------------SSNGKRALI 274
             I R+ +    +   P R+ + R +    RF                   S +G + + 
Sbjct: 323 GKIRRIDVASKAVSEVPFRVTDTRRVQETARFPVDVAPAQFDVKMIRWAQTSPDGSKVVF 382

Query: 275 SVQKDEAMDIYSVDLQSN---ATERLTN-TLFINISASYSPDSSQIVFESDREGK-EQLY 329
                   +++  DL++       RLT  +    +  S+S D   IV+ +  +     + 
Sbjct: 383 EA----LGNLWVRDLRNGVAGTPRRLTRQSDHFELYPSWSRDGRSIVYTTWNDENLGSIR 438

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---------IGVMKKDG 380
           V+   G + + I+ +    Y +P +SP G  + +   S              +  +   G
Sbjct: 439 VVPVAGGEGRTITTN-PGHYLEPRFSPDGQTVVYRTSSDGYLRSAMWSREPGVYRVSVRG 497

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            +   + +      P +      + F   +DGD    L S++L+G +E 
Sbjct: 498 GEPVKVTDSGAN--PQFGARNDRI-FLADRDGDK-RVLKSVNLSGEDER 542



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 9/102 (8%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSL 404
           E ++     SP G  I F         I VM   G + R +    +    P +SP GR +
Sbjct: 52  EGTWMALDVSPDGREIIFDLLGD----IYVMPIGGGEARPIASGVAWDMQPRYSPDGRFI 107

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
            F+  + G  G  L+ +D +G N   +++  +   + P W  
Sbjct: 108 AFTSDRAG--GDNLWVMDRDGSNPRQVSSETFRLLNSPAWTP 147



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 90/273 (32%), Gaps = 63/273 (23%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  +  +     S+ V+   G   R +T +      EPRFSP+ Q V Y           
Sbjct: 424 IVYTTWNDENLGSIRVVPVAGGEGRTITTNPGHY-LEPRFSPDGQTVVYR---------- 472

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                          +    + +  +S                 +Y V ++     ++T+
Sbjct: 473 --------------TSSDGYLRSAMWS-------------REPGVYRVSVRGGEPVKVTD 505

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYV-MQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +        +   + +I F +DR+G +++   +  +G D++  +        +   SP  
Sbjct: 506 SGAN---PQFGARNDRI-FLADRDGDKRVLKSVNLSGEDER--THLSSEWAAEFSISPDE 559

Query: 359 DLIAFTKF----------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             IA+T+           +G    +G   K   Q R+  +        WS     L +S 
Sbjct: 560 RWIAWTERFNAYVAPFVPTGRPMTVGADAKALPQTRVTRDAGEWLH--WSGDSSRLQWS- 616

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                 G +L+S  L+     +   PA    P 
Sbjct: 617 -----MGPELFSRPLSESFAFMDGAPADLPKPA 644


>gi|305667382|ref|YP_003863669.1| hypothetical protein FB2170_14083 [Maribacter sp. HTCC2170]
 gi|88709430|gb|EAR01663.1| hypothetical protein FB2170_14083 [Maribacter sp. HTCC2170]
          Length = 1098

 Score =  131 bits (330), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 76/198 (38%), Gaps = 25/198 (12%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +GK  +  +  D    IYS+ +     + L   +   I   +SP+  +I F SD  G
Sbjct: 59  VSPDGKTIVFDLLGD----IYSIPITGGNAKILRTGIPFEIQPRFSPNGKKIAFTSDAGG 114

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFSG-EKFAIGVMKKD 379
            + ++ M  +GSD K+I+++K     +  W P G+       FT         +      
Sbjct: 115 GDNIWTMNIDGSDAKQITKEKFRLLNNVSWMPDGNYFVARKHFTSQRSLGAGELWQYHIS 174

Query: 380 GSQERLLV----EDSNLQAPTWSPSGRSLIFSRK--------KDGDTGSKLYSIDL---- 423
           G     L     +  ++  P  SP G+ + +S           + D   ++Y I      
Sbjct: 175 GGSGLQLTKRKNDQQDVNEPNISPDGKYMYYSEDVYPGGYFQYNKDPNKQIYVIKRYDFE 234

Query: 424 NGRNETLINTPAYASDPQ 441
            G+   +   P  A+ PQ
Sbjct: 235 TGKTIIVTGGPGGAARPQ 252



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 106/275 (38%), Gaps = 56/275 (20%)

Query: 216 EPRFS--PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-------- 265
            P FS  PN + + +  ++   I +V +    +   P  +     +     F        
Sbjct: 303 YPSFSWLPNDKGIVF--WNKGKIHKVDINTLVVTNIPFTVDAKIKIAETVHFDSPVAPEE 360

Query: 266 -----------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                      S + K  + S        +++  L +   +RLT +  +    S+S D  
Sbjct: 361 FSAKVIRHAVTSPDKKTLVFSA----LGHLWTKRLPNGKPKRLTKSENLEFEPSFSADGK 416

Query: 315 QIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA- 372
           ++V+ S  +     ++ +   G    +++  K   Y  P +SP G +I + K SG     
Sbjct: 417 KLVYVSWNDESLGAIHSIPVTGGTPSKLTTQK-GIYRTPTYSPDGKMIVYGKESGNNDQG 475

Query: 373 --------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR--KKDGDTGSKLYSID 422
                   +  M  +G+  + + ++   + P ++ +G+ + +       G+    L+SID
Sbjct: 476 RTFSKKSGLYTMSANGTNPKWISKEG--EYPQFTANGKRIFYRTGGTYFGNLTKTLHSID 533

Query: 423 LNGRNET----------LINTPAYASDPQWVGFMD 447
           LNG+++           L+ +P    D +WV F +
Sbjct: 534 LNGKDKRNHIKSKYANLLVPSP----DNKWVAFTN 564



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 109/297 (36%), Gaps = 40/297 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           + I      ++G + +  +      +   +   +  +   G N + +  +      +PRF
Sbjct: 41  NYIEHQFKTDEGTWMNLDVSPDGKTIVFDLLGDIYSIPITGGNAK-ILRTGIPFEIQPRF 99

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----IS 275
           SPN +K+A+ + D      ++ M+     A +       ++    +  +G   +     +
Sbjct: 100 SPNGKKIAFTS-DAGGGDNIWTMNIDGSDAKQITKEKFRLLNNVSWMPDGNYFVARKHFT 158

Query: 276 VQKD-EAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQI----------VFESD 321
            Q+   A +++   +   +  +LT   N        + SPD   +           F+ +
Sbjct: 159 SQRSLGAGELWQYHISGGSGLQLTKRKNDQQDVNEPNISPDGKYMYYSEDVYPGGYFQYN 218

Query: 322 REGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           ++  +Q+YV++     + +  I          P  S  G  +AF K    K  + +   +
Sbjct: 219 KDPNKQIYVIKRYDFETGKTIIVTGGPGGAARPQVSRDGKKLAFIKRVRTKTVLFIHDLE 278

Query: 380 GSQERLLVED------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +E  +++                 + +W P+ + ++F  K       K++ +D+N
Sbjct: 279 TGEEWPVIDSLNKDQQEAWAIFGVYPSFSWLPNDKGIVFWNK------GKIHKVDIN 329



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 102/326 (31%), Gaps = 60/326 (18%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD--QILFEPRFSPNQQ 224
             +   F +R  F S+  +       L      G +   LT  ++  Q + EP  SP+ +
Sbjct: 145 MPDGNYFVARKHFTSQRSLGAG---ELWQYHISGGSGLQLTKRKNDQQDVNEPNISPDGK 201

Query: 225 KVAYATYDDEDILRVYLMDTR-----------IDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            + Y+          Y  D                    +         P+ S +GK+  
Sbjct: 202 YMYYSEDVYPGGYFQYNKDPNKQIYVIKRYDFETGKTIIVTGGPGGAARPQVSRDGKKLA 261

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTL-----------FINISASYSPDSSQIVFESDR 322
              +      ++  DL++     + ++L            +  S S+ P+   IVF +  
Sbjct: 262 FIKRVRTKTVLFIHDLETGEEWPVIDSLNKDQQEAWAIFGVYPSFSWLPNDKGIVFWN-- 319

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEA----------------------SYFDPVWSPQGDL 360
             K +++ +  N      I    +A                           V SP    
Sbjct: 320 --KGKIHKVDINTLVVTNIPFTVDAKIKIAETVHFDSPVAPEEFSAKVIRHAVTSPDKKT 377

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLY 419
           + F+        +   +    + + L +  NL+  P++S  G+ L++    D   G+ ++
Sbjct: 378 LVFSALG----HLWTKRLPNGKPKRLTKSENLEFEPSFSADGKKLVYVSWNDESLGA-IH 432

Query: 420 SIDLNGRNE-TLINTPAYASDPQWVG 444
           SI + G     L         P +  
Sbjct: 433 SIPVTGGTPSKLTTQKGIYRTPTYSP 458



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 87/235 (37%), Gaps = 28/235 (11%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDE 234
           ++++VS    +     ++  +   G     LT  +  I   P +SP+ + + Y     + 
Sbjct: 417 KLVYVS---WNDESLGAIHSIPVTGGTPSKLTTQK-GIYRTPTYSPDGKMIVYGKESGNN 472

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRALI----SVQKDEAMDIYSV 287
           D  R +   + +        N + +      P+F++NGKR       +   +    ++S+
Sbjct: 473 DQGRTFSKKSGLYTMSANGTNPKWISKEGEYPQFTANGKRIFYRTGGTYFGNLTKTLHSI 532

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG--------SDQK 339
           DL          + + N+    SPD+  + F +    K  +  +  NG        S   
Sbjct: 533 DLNGKDKRNHIKSKYANL-LVPSPDNKWVAFTNLH--KAFIAPLNLNGKTVDLDNNSKSV 589

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK----KDGSQERLLVEDS 390
            +SQ  + +  +  WS     I F     E F+  +        GS E++   DS
Sbjct: 590 PVSQIAKDAGINLHWSKDSKTI-FWTLGDEYFSNNIKDRYTFLPGSPEKVTAMDS 643


>gi|86158652|ref|YP_465437.1| hypothetical protein Adeh_2230 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775163|gb|ABC82000.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 1042

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 67/345 (19%), Positives = 116/345 (33%), Gaps = 71/345 (20%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
              + IT  +G   +         +   ++  L  + R G   R LT    +    P FS
Sbjct: 33  AAVRDITVHEGTNVAVTASPDGRDLVMDLQGVLWSLPRGGGEARRLTDGLLEPA-RPDFS 91

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-- 278
           P   +VA+  Y       ++ M        +++ +       PRFS +G R   S  +  
Sbjct: 92  PRGDRVAFQAY-AGGTFHIWTMRPD-GTDVRQLTSGHGDDREPRFSPDGTRIAFSSDRAF 149

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSD 337
           + + D++ VD+ S A  R T         +++PD  +I F S        +  + S G+ 
Sbjct: 150 EGSYDVWVVDVASGALTRWTEAPADEFEPAWTPDGGEIAFVSGAGSTGTAIEAVDSTGAR 209

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------------------------- 372
           +   +    A    P  SP G  +A+ +F+  +                           
Sbjct: 210 RTLATAPAGARLNSPSISPDGAHLAWIQFAANRSRLVVDGAPASPFEDVFPFPAHWLSAR 269

Query: 373 ---------IGVMKKD-GSQERLLVE-DSNLQAPTW-----------------------S 398
                    I V   D G+ E++  +    L  P W                       S
Sbjct: 270 TLLYSADGGIRVTDLDAGTSEQVAFQATFRLVRPAWDRKRFDFDRTAPRQALGIVAPALS 329

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           P G  ++F         ++L+ +D+ G    L + P YA DP W 
Sbjct: 330 PDGTRVVF------QALNRLWLMDVGGAPRPLTDGPYYAQDPAWS 368



 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 50/251 (19%), Positives = 92/251 (36%), Gaps = 39/251 (15%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  P  SP+  +V +   +        L    +  AP+ + +       P +S +G R  
Sbjct: 323 IVAPALSPDGTRVVFQALNR-------LWLMDVGGAPRPLTDGPYYAQDPAWSRDGTRIA 375

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +  K    D+Y +D+ + A +R+T+     ++ ++SPD  ++ F+ D+ G     V+  
Sbjct: 376 YASDKAGTADLYVLDVATGAEQRVTSLPGAEVAPAWSPDGGRLAFQ-DQAGATH--VLDL 432

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFSGEKFAIGVMKKDGSQERL- 385
                ++I     A    P WS  G  +A         +F      I  +  +    R  
Sbjct: 433 ASGAVRQIVAPLFAP-GRPTWSADGRTVALAALKPYTRRFREGTSQILTVDVESGATRYQ 491

Query: 386 ------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN------GRNETLINT 433
                  +       P WSP G +L F         S L+ + ++      G    + + 
Sbjct: 492 EAAPFESLSTRGDDGPVWSPDGTALAFV------MQSTLWVMPVDAAGRAAGSPVRITSE 545

Query: 434 PAYASDPQWVG 444
           P  A  P W G
Sbjct: 546 PTDA--PTWSG 554



 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 93/237 (39%), Gaps = 31/237 (13%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N L +MD  GA              +P +S +  ++AYA+ D      +Y++D       
Sbjct: 341 NRLWLMDVGGA--PRPLTDGPYYAQDPAWSRDGTRIAYAS-DKAGTADLYVLDVATGAE- 396

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +R+ +     +AP +S +G R      +D+A   + +DL S A  ++   LF     ++S
Sbjct: 397 QRVTSLPGAEVAPAWSPDGGRLAF---QDQAGATHVLDLASGAVRQIVAPLFAPGRPTWS 453

Query: 311 PDSSQIVFES-------DREGKEQLYVMQSNGSDQK-----RISQDKEASYFDPVWSPQG 358
            D   +   +        REG  Q+  +       +                 PVWSP G
Sbjct: 454 ADGRTVALAALKPYTRRFREGTSQILTVDVESGATRYQEAAPFESLSTRGDDGPVWSPDG 513

Query: 359 DLIAFTKFSGEKFAIGVMKKD------GSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             +AF   S     + VM  D      GS  R+  E ++  APTWS   R L++   
Sbjct: 514 TALAFVMQS----TLWVMPVDAAGRAAGSPVRITSEPTD--APTWSGDSRRLLYLSS 564



 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 105/350 (30%), Gaps = 71/350 (20%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           A  ++D + +    +      R+ F + +  +      +  M  DG ++R LT       
Sbjct: 75  ARRLTDGLLEPARPDFSPRGDRVAFQAYAGGT----FHIWTMRPDGTDVRQLTSGHGD-D 129

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            EPRFSP+  ++A+++    +      +      A  R     +    P ++ +G     
Sbjct: 130 REPRFSPDGTRIAFSSDRAFEGSYDVWVVDVASGALTRWTEAPADEFEPAWTPDGGEIAF 189

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIV---FESDR-----EG 324
                           + A   L          S S SPD + +    F ++R     +G
Sbjct: 190 VSGAGSTGTAIEAVDSTGARRTLATAPAGARLNSPSISPDGAHLAWIQFAANRSRLVVDG 249

Query: 325 KE--------------------------QLYVMQSNGSDQKRISQDKEASYFDPVW---- 354
                                        + V   +    ++++         P W    
Sbjct: 250 APASPFEDVFPFPAHWLSARTLLYSADGGIRVTDLDAGTSEQVAFQATFRLVRPAWDRKR 309

Query: 355 -------------------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                              SP G  + F   +     + +M   G+   L       Q P
Sbjct: 310 FDFDRTAPRQALGIVAPALSPDGTRVVFQALN----RLWLMDVGGAPRPLTDGPYYAQDP 365

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
            WS  G  + ++  K G   + LY +D+  G  + + + P     P W  
Sbjct: 366 AWSRDGTRIAYASDKAGT--ADLYVLDVATGAEQRVTSLPGAEVAPAWSP 413



 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 7/154 (4%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           A   +T     N++ + SPD   +V     + +  L+ +   G + +R++ D       P
Sbjct: 34  AVRDITVHEGTNVAVTASPDGRDLV----MDLQGVLWSLPRGGGEARRLT-DGLLEPARP 88

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
            +SP+GD +AF  ++G  F I  M+ DG+  R L     + + P +SP G  + FS  + 
Sbjct: 89  DFSPRGDRVAFQAYAGGTFHIWTMRPDGTDVRQLTSGHGDDREPRFSPDGTRIAFSSDRA 148

Query: 412 GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
            +    ++ +D+ +G        PA   +P W  
Sbjct: 149 FEGSYDVWVVDVASGALTRWTEAPADEFEPAWTP 182


>gi|219847846|ref|YP_002462279.1| WD40 domain-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219542105|gb|ACL23843.1| WD40 domain protein beta Propeller [Chloroflexus aggregans DSM
           9485]
          Length = 629

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 63/332 (18%), Positives = 120/332 (36%), Gaps = 53/332 (15%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFS 220
           Y  +       +     +  S +       L   + +G   R    + + +   +   ++
Sbjct: 297 YPHLGTPWAAPDPVAPLIYASNIDTGSYWELYRANFNGGGQRITFNNNETVAYSWLRSWN 356

Query: 221 PNQQKVAYATYDDEDILR-VYLMDTRIDRAPKR----------------IGNFRS----- 258
           PN+Q +A  +  ++ + R VYL+++      ++                +  +       
Sbjct: 357 PNRQMLAVDSRREQPVYRQVYLLNSVAASDGEQASAATATRISSVDMRDLWYYPGGPDEL 416

Query: 259 -----MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA----TERLTNT-LFINIS-A 307
                    P  S +G R L+  ++ +  D+    +          RLT      +    
Sbjct: 417 ISKTVNEFNPMVSPDGTRLLVISERVDRPDLMLWSIADTNSLTIPSRLTRDQPACHYETP 476

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNG----------------SDQKRISQDKEASYFD 351
           ++SPD  +I + SD +G   +Y  + +                 S+ +++S ++ A+   
Sbjct: 477 AWSPDGRRIYWVSDCDGYFAIYSAEPSYRPYSLRNNLVGFIAELSNIRKLS-NQNANDRF 535

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKK 410
              SP G  IAF       + I VM  DGS  R L    +   APTWSP GR L F+  +
Sbjct: 536 ARVSPDGKQIAFASDRDGNWEIYVMNSDGSNVRRLTNNPATDDAPTWSPDGRQLAFASDR 595

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           DGD    + ++      + +    A    P W
Sbjct: 596 DGDFEIYILNVSDGTITQQVTQNTAQDRWPLW 627



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 67/153 (43%), Gaps = 14/153 (9%)

Query: 217 PRFSPNQQKVAYAT--------YDDEDILRVYLMDTRIDRAP------KRIGNFRSMILA 262
           P +SP+ +++ + +        Y  E   R Y +   +          +++ N  +    
Sbjct: 476 PAWSPDGRRIYWVSDCDGYFAIYSAEPSYRPYSLRNNLVGFIAELSNIRKLSNQNANDRF 535

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            R S +GK+   +  +D   +IY ++   +   RLTN    + + ++SPD  Q+ F SDR
Sbjct: 536 ARVSPDGKQIAFASDRDGNWEIYVMNSDGSNVRRLTNNPATDDAPTWSPDGRQLAFASDR 595

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +G  ++Y++  +     +      A    P+W+
Sbjct: 596 DGDFEIYILNVSDGTITQQVTQNTAQDRWPLWT 628


>gi|116625575|ref|YP_827731.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228737|gb|ABJ87446.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 652

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/223 (23%), Positives = 97/223 (43%), Gaps = 38/223 (17%)

Query: 259 MILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +   + S +G+    +VQ+      D    I+     +    +LT+    +    +SPD
Sbjct: 32  SVAGAQISPDGRYVAYTVQQANWDENDFISQIWIAVTATGERYQLTSGKKSSTGPQWSPD 91

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---- 368
           S ++ F SDR+GK Q+Y++  NG +   ++ ++        WSP G  IAFT        
Sbjct: 92  SHRLAFTSDRDGKRQIYLISPNGGEAIALTSEENG-VSAIAWSPDGASIAFTSSGPDAKP 150

Query: 369 --------EKFAI----------GVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIF 406
                    +F I           ++K   ++ +     S  +    A +WSP G+ + F
Sbjct: 151 RKDRKEKYGEFEIIEHDYTMSHLWLIKVADNKPKATALTSGDKFSVGAFSWSPDGKRIAF 210

Query: 407 SRKKDGDTGSK----LYSIDL-NGRNETLINTPAYASDPQWVG 444
           +  +D D GS+    +Y +DL +   + L+++P   S+P+W  
Sbjct: 211 AAGRDPDLGSQDTESIYVLDLADLHVKKLLDSPGPHSNPKWSP 253



 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/261 (19%), Positives = 93/261 (35%), Gaps = 40/261 (15%)

Query: 219 FSPNQQKVAYAT----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            SP+ + VAY      +D+ D +    +         ++ + +     P++S +  R   
Sbjct: 38  ISPDGRYVAYTVQQANWDENDFISQIWIAVTATGERYQLTSGKKSSTGPQWSPDSHRLAF 97

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---------DREGK 325
           +  +D    IY +         LT+      + ++SPD + I F S         DR+ K
Sbjct: 98  TSDRDGKRQIYLISPNGGEAIALTSEENGVSAIAWSPDGASIAFTSSGPDAKPRKDRKEK 157

Query: 326 E-------------QLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
                          L++++   +  K   ++   + S     WSP G  IAF       
Sbjct: 158 YGEFEIIEHDYTMSHLWLIKVADNKPKATALTSGDKFSVGAFSWSPDGKRIAFAAGRDPD 217

Query: 371 F------AIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD----TGSKLY 419
                  +I V+   D   ++LL        P WSP+GR + F+              + 
Sbjct: 218 LGSQDTESIYVLDLADLHVKKLLDSPGPHSNPKWSPNGREIAFTTSNSVPNFFYANRYIA 277

Query: 420 SIDLNGRNETLINTPAYASDP 440
            I  +G    L+ T  +  DP
Sbjct: 278 VIPADGGQPRLL-TKDFDEDP 297



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 59/272 (21%), Positives = 105/272 (38%), Gaps = 48/272 (17%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            RY   S  +    P++SP+  ++A+ +  D    ++YL+      A   + +  + + A
Sbjct: 72  ERYQLTSGKKSSTGPQWSPDSHRLAFTSDRDGK-RQIYLISPNGGEAIA-LTSEENGVSA 129

Query: 263 PRFSSNGKRALISVQKDEA----------------------MDIYSVDLQSNAT--ERLT 298
             +S +G     +    +A                        ++ + +  N      LT
Sbjct: 130 IAWSPDGASIAFTSSGPDAKPRKDRKEKYGEFEIIEHDYTMSHLWLIKVADNKPKATALT 189

Query: 299 NTLFINISA-SYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQDKEASYFD 351
           +    ++ A S+SPD  +I F + R+        E +YV+       K++  D    + +
Sbjct: 190 SGDKFSVGAFSWSPDGKRIAFAAGRDPDLGSQDTESIYVLDLADLHVKKLL-DSPGPHSN 248

Query: 352 PVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGR 402
           P WSP G  IAFT  +           I V+  DG Q RLL +D + + P    W+  G 
Sbjct: 249 PKWSPNGREIAFTTSNSVPNFFYANRYIAVIPADGGQPRLLTKDFD-EDPNLLEWADDG- 306

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            + F   +   T +  + ID   R    I  P
Sbjct: 307 -IYFGASQ--KTAAHTFRIDPATRAIRRITGP 335



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 64/196 (32%), Gaps = 16/196 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDED-----ILRVYLMDTRIDRAPKRIGNFRSMI 260
           LT      +    +SP+ +++A+A   D D        +Y++D   D   K++ +     
Sbjct: 188 LTSGDKFSVGAFSWSPDGKRIAFAAGRDPDLGSQDTESIYVLDL-ADLHVKKLLDSPGPH 246

Query: 261 LAPRFSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFINISA-SYSPDS 313
             P++S NG+    +              I  +         LT     + +   ++ D 
Sbjct: 247 SNPKWSPNGREIAFTTSNSVPNFFYANRYIAVIPADGGQPRLLTKDFDEDPNLLEWADDG 306

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-A 372
             I F + ++     + +       +RI+           ++      A    S  +F  
Sbjct: 307 --IYFGASQKTAAHTFRIDPATRAIRRITGPDAFHATGGSFTRDHRTFAGVGASPNRFPE 364

Query: 373 IGVMKKDGSQERLLVE 388
           I V        + L +
Sbjct: 365 IFVSSVSDFAPKYLTD 380


>gi|54294320|ref|YP_126735.1| hypothetical protein lpl1385 [Legionella pneumophila str. Lens]
 gi|53754152|emb|CAH15625.1| hypothetical protein lpl1385 [Legionella pneumophila str. Lens]
          Length = 656

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 113/306 (36%), Gaps = 58/306 (18%)

Query: 195 VMDRDGANIRYLTP----SRDQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTR 245
           V+  DG   + L       R Q + EP  SP+ + VAY               V+ +   
Sbjct: 13  VVFHDGWAGKRLPELDDLYRIQNISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVD 72

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFI 303
              + +      S    P++S NGK         K+    I+   +Q N   +LT     
Sbjct: 73  SKSSQQITFAEDSSSSLPKWSPNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTYIDGE 132

Query: 304 NISASYSPDSSQIVFE---SDRE------------------------GKEQLYVMQSNGS 336
               ++SPDS++I F    SD                          G++ LY+++    
Sbjct: 133 VSDFTWSPDSNRIAFIAQKSDPSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSK 192

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKK-DGSQERLLVE- 388
              +++ D     + P WSP G  IAF    G+       + I +++   G++ER L   
Sbjct: 193 AITQLT-DGNHDEYLPAWSPDGKYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKERQLTHF 251

Query: 389 DSNLQAP------TWSPSGRSLIFSRKKDGDTG----SKLYSIDLNGRNETLI-NTPAYA 437
             +   P      +WSP    + + R  +        ++L  ID+N ++E +I     + 
Sbjct: 252 PGSDMNPDYDSNLSWSPDSSKIAYLRSNEHQWTYYSPNQLAIIDINTKDERIIAPRDNWY 311

Query: 438 SDPQWV 443
             P+W 
Sbjct: 312 YKPKWS 317



 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 107/304 (35%), Gaps = 49/304 (16%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +    I    +  +  D  + + +T + D     P++SPN + +AY +   ++      +
Sbjct: 56  NAKDNISTTEVWKVSVDSKSSQQITFAEDSSSSLPKWSPNGKWLAYLSDGGKEGTTQIWI 115

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD----------------------- 279
            +  D    ++      +    +S +  R     QK                        
Sbjct: 116 ASVQDNKEHQLTYIDGEVSDFTWSPDSNRIAFIAQKSDPSNEEEQPIVVDRYQFKVDGVG 175

Query: 280 ----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES------DREGKEQLY 329
                   +Y V+L+S A  +LT+        ++SPD   I F +      DR     +Y
Sbjct: 176 YLGKGRDHLYLVELKSKAITQLTDGNHDEYLPAWSPDGKYIAFVTKRGKDPDRHFNYDIY 235

Query: 330 VMQSNGSDQKRISQDKEASYFDP------VWSPQGDLIAFTKFSGEKF------AIGVMK 377
           +++     ++R       S  +P       WSP    IA+ + +  ++       + ++ 
Sbjct: 236 LIEPKSGAKERQLTHFPGSDMNPDYDSNLSWSPDSSKIAYLRSNEHQWTYYSPNQLAIID 295

Query: 378 KDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPA 435
            +   ER++    N    P WS  G+ +      +    + L  ID+ +G+ + L     
Sbjct: 296 INTKDERIIAPRDNWYYKPKWSQDGKFIY--ALIEESRNTYLNRIDIHSGQVKKLTGGLR 353

Query: 436 YASD 439
           Y  D
Sbjct: 354 YDMD 357



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 95/258 (36%), Gaps = 51/258 (19%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQKDEAMD------IYSVDL 289
           L V+       R P+    +R   ++ P  S +GK    +V +  A D      ++ V +
Sbjct: 12  LVVFHDGWAGKRLPELDDLYRIQNISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSV 71

Query: 290 QSNATERLTNTLFINIS-ASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRISQDKE 346
            S +++++T     + S   +SP+   + + SD  +EG  Q+++     + + +++   +
Sbjct: 72  DSKSSQQITFAEDSSSSLPKWSPNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTYI-D 130

Query: 347 ASYFDPVWSPQGDLIAFTKF---------------------------SGEKFAIGVMKKD 379
               D  WSP  + IAF                                 +  + +++  
Sbjct: 131 GEVSDFTWSPDSNRIAFIAQKSDPSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELK 190

Query: 380 GSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGD----TGSKLYSIDL-NGRNETLINT 433
                 L + ++ +  P WSP G+ + F  K+  D        +Y I+  +G  E  +  
Sbjct: 191 SKAITQLTDGNHDEYLPAWSPDGKYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKERQLTH 250

Query: 434 -PAYASDP------QWVG 444
            P    +P       W  
Sbjct: 251 FPGSDMNPDYDSNLSWSP 268



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 41/182 (22%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               SPD   + +        D     +++ +  +    ++I+  +++S   P WSP G 
Sbjct: 38  EPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQQITFAEDSSSSLPKWSPNGK 97

Query: 360 LIAFTKFSG--EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD----- 411
            +A+    G      I +     ++E  L   D  +   TWSP    + F  +K      
Sbjct: 98  WLAYLSDGGKEGTTQIWIASVQDNKEHQLTYIDGEVSDFTWSPDSNRIAFIAQKSDPSNE 157

Query: 412 --------------------GDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVG 444
                               G     LY ++L  +  T +         PA++ D +++ 
Sbjct: 158 EEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYLPAWSPDGKYIA 217

Query: 445 FM 446
           F+
Sbjct: 218 FV 219



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 32/68 (47%), Gaps = 12/68 (17%)

Query: 391 NLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLIN--------TPAYAS 438
           N+  P  SP G+ + ++  +    D  + ++++ + ++ ++   I          P ++ 
Sbjct: 35  NISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQQITFAEDSSSSLPKWSP 94

Query: 439 DPQWVGFM 446
           + +W+ ++
Sbjct: 95  NGKWLAYL 102


>gi|225874499|ref|YP_002755958.1| peptidase, S41B (tricorn core protease) family [Acidobacterium
           capsulatum ATCC 51196]
 gi|225793616|gb|ACO33706.1| peptidase, S41B (tricorn core protease) family [Acidobacterium
           capsulatum ATCC 51196]
          Length = 1099

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 53/250 (21%), Positives = 95/250 (38%), Gaps = 28/250 (11%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             L +P  SP+ Q++A+A+  D     ++ +  +   A   I N  +    P +S +G +
Sbjct: 56  PSLTQPALSPDGQEIAFASGGD-----IWTVPAKGGDAHLLISN-PATESRPLYSPDGSK 109

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQL 328
                 +    DIY + L +   +R+T    +    ++S D   I F    SD +    +
Sbjct: 110 IAFISTRTGGGDIYVLTLATGQLQRITYGDTLEQLDAWSADGKWIYFTNGASDIDYNTDV 169

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--------FSGEKFAI------G 374
           Y + + G     +S +   + F+   SP G  +            +      I       
Sbjct: 170 YRVSAEGGTPMPVSAESYLAEFESAPSPDGKSVVMMAKGISDQQWWRDGHAHIDDTELWW 229

Query: 375 VMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN- 432
                G   R+LV +D+    P WS SG+++ +   K G     L+S+  NG  E  +  
Sbjct: 230 KSLAPGGAYRVLVPDDAKHAWPMWSASGKTIYYMSDKTGP--ENLWSVSSNGGAEKQLTH 287

Query: 433 -TPAYASDPQ 441
            T      P 
Sbjct: 288 FTNGRVLWPS 297



 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 88/211 (41%), Gaps = 14/211 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +K+A   + D     VY+   +      RI     M  +  +S +  + + +  
Sbjct: 351 ALSPDGKKLAVIAHGD-----VYVTTEKDGGEAIRITRTPQMEASLHWSPDSTKLIYTSM 405

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D   DIY  +   +   +LT+         ++PD   I +  DR   +Q++++      
Sbjct: 406 RDGNSDIYEYNFDGSKETQLTHGTAQCEHPRWNPDGKAIAYIRDR---KQVHLLTLASGK 462

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLV---EDSNLQ 393
            + ++ DK  S  D  +SP GD +A+T +  + F  I V+   G   R +          
Sbjct: 463 DEVLATDKMWSP-DLEFSPAGDWLAYTIYGYDGFRNIKVVPTKGGAARSITFLANGETAD 521

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              WSP G+ L+F+  +  +    +  +DL 
Sbjct: 522 QMAWSPDGKYLLFATAQRSE-NFDMARVDLT 551



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 76/208 (36%), Gaps = 27/208 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +  +  P  S +G+    +       DI++V  +      L +         YSPD S+I
Sbjct: 55  KPSLTQPALSPDGQEIAFAS----GGDIWTVPAKGGDAHLLISNPATESRPLYSPDGSKI 110

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAI 373
            F S R G   +YV+       +RI+   +       WS  G  I FT  + +      +
Sbjct: 111 AFISTRTGGGDIYVLTLATGQLQRITY-GDTLEQLDAWSADGKWIYFTNGASDIDYNTDV 169

Query: 374 GVMKKDGSQERLLVEDSN----LQAPTWSPSGRSLIFSRK--------KDGDT---GSKL 418
             +  +G     +  +S       AP  SP G+S++   K        +DG      ++L
Sbjct: 170 YRVSAEGGTPMPVSAESYLAEFESAP--SPDGKSVVMMAKGISDQQWWRDGHAHIDDTEL 227

Query: 419 YSIDL--NGRNETLINTPAYASDPQWVG 444
           +   L   G    L+   A  + P W  
Sbjct: 228 WWKSLAPGGAYRVLVPDDAKHAWPMWSA 255



 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 103/302 (34%), Gaps = 37/302 (12%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
              + + ++ +           +  +  +G     ++       FE   SP+ + V    
Sbjct: 147 WSADGKWIYFTNGASDIDYNTDVYRVSAEGGTPMPVSAESYLAEFESAPSPDGKSVVMMA 206

Query: 231 YDDEDIL------------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
               D               ++        A + +    +    P +S++GK       K
Sbjct: 207 KGISDQQWWRDGHAHIDDTELWWKSLAPGGAYRVLVPDDAKHAWPMWSASGKTIYYMSDK 266

Query: 279 DEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               +++SV     A ++LT+ T    +  S       IVFE +      ++ M +    
Sbjct: 267 TGPENLWSVSSNGGAEKQLTHFTNGRVLWPSIGDHGKTIVFERELT----IWKMNTATGK 322

Query: 338 QKRISQDKEAS-------------YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +++  +   S             + +   SP G  +A     G+ +     +KDG +  
Sbjct: 323 AEQVPVELRGSPSGLGVEHEAVSHFSEMALSPDGKKLAVIAH-GDVYV--TTEKDGGEAI 379

Query: 385 LLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQW 442
            +     ++A   WSP    LI++  +DG   S +Y  + +G  ET +    A    P+W
Sbjct: 380 RITRTPQMEASLHWSPDSTKLIYTSMRDG--NSDIYEYNFDGSKETQLTHGTAQCEHPRW 437

Query: 443 VG 444
             
Sbjct: 438 NP 439



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 96/260 (36%), Gaps = 29/260 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  +   G +   L  S       P +SP+  K+A+ +        +Y++     +  +
Sbjct: 77  DIWTVPAKGGDAH-LLISNPATESRPLYSPDGSKIAFISTRTGGG-DIYVLTLATGQL-Q 133

Query: 252 RIGNFRSMILAPRFSSNGKRALIS---VQKDEAMDIYSVDLQSNATERLTNTLFI-NISA 307
           RI    ++     +S++GK    +      D   D+Y V  +      ++   ++    +
Sbjct: 134 RITYGDTLEQLDAWSADGKWIYFTNGASDIDYNTDVYRVSAEGGTPMPVSAESYLAEFES 193

Query: 308 SYSPDSSQIVF----ESD----REGKEQL-----YVMQSNGSDQKRISQDKEASYFDPVW 354
           + SPD   +V      SD    R+G   +     +          R+    +A +  P+W
Sbjct: 194 APSPDGKSVVMMAKGISDQQWWRDGHAHIDDTELWWKSLAPGGAYRVLVPDDAKHAWPMW 253

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDG 412
           S  G  I +         +  +  +G  E+ L    +  +  P+    G++++F R+   
Sbjct: 254 SASGKTIYYMSDKTGPENLWSVSSNGGAEKQLTHFTNGRVLWPSIGDHGKTIVFERE--- 310

Query: 413 DTGSKLYSID-LNGRNETLI 431
                ++ ++   G+ E + 
Sbjct: 311 ---LTIWKMNTATGKAEQVP 327



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 98/290 (33%), Gaps = 35/290 (12%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++++++ S    +    + +   + DG+    LT    Q    PR++P+ + +AY     
Sbjct: 397 STKLIYTSMRDGN----SDIYEYNFDGSKETQLTHGTAQ-CEHPRWNPDGKAIAYI---- 447

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSN 292
            D  +V+L+     +  + +   +       FS  G     ++   D   +I  V  +  
Sbjct: 448 RDRKQVHLLTLASGKD-EVLATDKMWSPDLEFSPAGDWLAYTIYGYDGFRNIKVVPTKGG 506

Query: 293 ATERLTNTLFINI--SASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           A   +T           ++SPD   ++F  + R     +  +        +  +++    
Sbjct: 507 AARSITFLANGETADQMAWSPDGKYLLFATAQRSENFDMARVDL-TLHVPQYQENQFYDL 565

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIG----------------VMKKDGSQERLLVEDSNLQ 393
           F     P+         +  K A                  V      +  LL    +  
Sbjct: 566 FKSPTEPKNPKSPAESTTSGKDAAAKTKDKKPASKAKPVNIVFDGIRDRLSLLPLGLSAT 625

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN----ETLINTPAYASD 439
            P  SP G++LIF  +  G+     +S+  N +       L  +    S+
Sbjct: 626 QPVISPDGKTLIFQAEVAGEDNLYSWSLKENPKTPPVARQLTASHGDKSN 675



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 14/108 (12%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIF 406
           S   P  SP G  IAF         I  +   G    LL+ +   ++ P +SP G  + F
Sbjct: 57  SLTQPALSPDGQEIAFASGGD----IWTVPAKGGDAHLLISNPATESRPLYSPDGSKIAF 112

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTP-------AYASDPQWVGFMD 447
              + G  G  +Y + L       I          A+++D +W+ F +
Sbjct: 113 ISTRTG--GGDIYVLTLATGQLQRITYGDTLEQLDAWSADGKWIYFTN 158



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 81/243 (33%), Gaps = 34/243 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRID--RAPKRIGNFRSMILAPRFSSNGKRALI-S 275
           FSP    +AY  Y  +    + ++ T+    R+   + N  +      +S +GK  L  +
Sbjct: 478 FSPAGDWLAYTIYGYDGFRNIKVVPTKGGAARSITFLANGETADQM-AWSPDGKYLLFAT 536

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVM-- 331
            Q+ E  D+  VDL +    +     F ++  S +   +      ES   GK+       
Sbjct: 537 AQRSENFDMARVDL-TLHVPQYQENQFYDLFKSPTEPKNPKSPA-ESTTSGKDAAAKTKD 594

Query: 332 --QSNGSDQKRISQDK----------EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
              ++ +    I  D             S   PV SP G  + F      +  +      
Sbjct: 595 KKPASKAKPVNIVFDGIRDRLSLLPLGLSATQPVISPDGKTLIFQAEVAGEDNLYSWSLK 654

Query: 380 GSQ-----ERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            +       R L     +     + P  ++++F           +  + ++G + T I  
Sbjct: 655 ENPKTPPVARQLTASHGDKSNVQFMPDSKTIVFLEN------GHVMKLAVDGGHATPIPV 708

Query: 434 PAY 436
            A 
Sbjct: 709 TAD 711



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 20/167 (11%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQKD 279
           + +  A  T D +   +   ++   D    R+      + A  P  S +GK  +   +  
Sbjct: 584 SGKDAAAKTKDKKPASKAKPVNIVFDGIRDRLSLLPLGLSATQPVISPDGKTLIFQAEVA 643

Query: 280 EAMDIYSVDLQSNA-----TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
              ++YS  L+ N        +LT +     +  + PDS  IVF         +  +  +
Sbjct: 644 GEDNLYSWSLKENPKTPPVARQLTASHGDKSNVQFMPDSKTIVFL----ENGHVMKLAVD 699

Query: 335 GSDQKRISQDKEAS---------YFDPVWSPQGDLIAFTKFSGEKFA 372
           G     I    + +          F+  WS           +G+ + 
Sbjct: 700 GGHATPIPVTADYTVNFNVEKNVVFNEAWSDLERRYYNPSMNGQNWK 746



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 54/164 (32%), Gaps = 12/164 (7%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAP--KRIG 254
            DG   R           +P  SP+ + + + A    ED L  + +       P  +++ 
Sbjct: 608 FDGIRDRLSLLPLGLSATQPVISPDGKTLIFQAEVAGEDNLYSWSLKENPKTPPVARQLT 667

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                    +F  + K  +      E   +  + +       +  T    ++ +      
Sbjct: 668 ASHGDKSNVQFMPDSKTIVF----LENGHVMKLAVDGGHATPIPVTADYTVNFNV---EK 720

Query: 315 QIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            +VF  +  + + + Y    NG + K I   + A +   V +P 
Sbjct: 721 NVVFNEAWSDLERRYYNPSMNGQNWKAI-HAEFAPFIAGVATPD 763


>gi|148554693|ref|YP_001262275.1| amidohydrolase [Sphingomonas wittichii RW1]
 gi|148499883|gb|ABQ68137.1| amidohydrolase [Sphingomonas wittichii RW1]
          Length = 1010

 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 84/239 (35%), Gaps = 12/239 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                  R+   F    SP+  ++A    D +  LR+             +         
Sbjct: 32  PSRTFTVREGTNFTAAMSPDATRIA---IDLQGELRIL---PAKGGKAVVVPGLSGESRL 85

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +S +GK             I++V    +   +L+     +    +S D   I+F SDR
Sbjct: 86  PSWSPDGKLIAFQYYLGGYWHIFTVKPDGSDLRQLSFGAADDREPVWSADGRSILFASDR 145

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G   ++ +  + +   ++++  E  Y  P  +  G  IAF   + +   + +   DG+ 
Sbjct: 146 AGNFDIWSVGLDRAAPVQLTRAPEDEY-SPAVATDGR-IAFVATAAKGSELRLRSVDGAV 203

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK----LYSIDLNGRNETLINTPAYA 437
             +  + S +  P WS  G S+ +     G  G +    L+  D     + L +     
Sbjct: 204 RVVTADPSRIALPAWSGDGSSIAYVAYASGRLGRRGEASLHVADATSGKDRLASAAGED 262



 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 71/386 (18%), Positives = 138/386 (35%), Gaps = 42/386 (10%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR----VEFRLWDVKD 135
             +     +  +   D    F  W S+G       ++ +  +D        + R+  V  
Sbjct: 129 EPVWSADGRSILFASDRAGNFDIW-SVGLDRAAPVQLTRAPEDEYSPAVATDGRIAFVAT 187

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII-KNSLC 194
             +    +  S   + R +    +D    ++    GD +S       S   G   + SL 
Sbjct: 188 AAKGSELRLRSVDGAVRVVT---ADPSRIALPAWSGDGSSIAYVAYASGRLGRRGEASLH 244

Query: 195 VMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED---------ILRVYLMDT 244
           V D   G +        D  +  P+  P    +  A    +                + T
Sbjct: 245 VADATSGKDRLASAAGEDVFVARPQSLPRGGWLYTADGVIKRQGTGAAATIPFAADFIVT 304

Query: 245 RIDRAPKRIGNFRSM-------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                 ++  +F S        IL P  S +GK    +   D    ++ + +      RL
Sbjct: 305 PAPAYARKRHDFTSTAPKPVKGILHPVVSPDGKYVAFTALSD----LWLLKIGDPKPVRL 360

Query: 298 TNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           TN  F++I  ++SPD S++ + SDR G     LYV       ++R+++  E S   PV+S
Sbjct: 361 TNDPFVDIDPAWSPDGSRLAYTSDRRGVGTMDLYVRDMASGREERLTETTE-SVAAPVFS 419

Query: 356 PQGDLIAFTKFSGEKFAIG---VMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFS---- 407
           P G  IA T  + + +      ++     + R +          +WSP G+S+ +     
Sbjct: 420 PDGKSIALTMLASDDWHANFPNIVDLQTKEIRKIHGWTFKPSVGSWSPDGKSVNYVVLAE 479

Query: 408 -RKKDGDTGSKLYSIDLNGRNETLIN 432
              +     +++  + ++G  + L +
Sbjct: 480 KSDRFRHGLNEIMRVPVDGGEQRLTS 505



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 56/316 (17%), Positives = 109/316 (34%), Gaps = 39/316 (12%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS----ESVVSGIIKNSLC 194
           +I ++   + A+    A  I      +   ++ DF S            VVS   K    
Sbjct: 283 VIKRQGTGAAATIPFAADFIVTPA-PAYARKRHDFTSTAPKPVKGILHPVVSPDGKYVAF 341

Query: 195 VMDRD------GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               D      G        +   +  +P +SP+  ++AY +           +      
Sbjct: 342 TALSDLWLLKIGDPKPVRLTNDPFVDIDPAWSPDGSRLAYTSDRRGVGTMDLYVRDMASG 401

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI---YSVDLQSNATERLTNTLFINI 305
             +R+      + AP FS +GK   +++   +         VDLQ+    ++    F   
Sbjct: 402 REERLTETTESVAAPVFSPDGKSIALTMLASDDWHANFPNIVDLQTKEIRKIHGWTFKPS 461

Query: 306 SASYSPDSSQIVFE-----SD--REGKEQLYVMQSNGSDQKRISQDKEASYF-----DPV 353
             S+SPD   + +      SD  R G  ++  +  +G +Q+  S     S         +
Sbjct: 462 VGSWSPDGKSVNYVVLAEKSDRFRHGLNEIMRVPVDGGEQRLTSPIPGKSLGIRAKDGAI 521

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDG-----SQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           +SP G  +AF         +  +  D         R +  D     P+W+   RS+++  
Sbjct: 522 YSPDGTHMAFVADG----VLWTVATDRHGDFIDSPRRMTND-LADEPSWAGDSRSIVY-- 574

Query: 409 KKDGDTGSKLYSIDLN 424
            +  D   +++  D +
Sbjct: 575 -QSADKLKRIWLDDAH 589



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 100/265 (37%), Gaps = 23/265 (8%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           ++ T  +G   +  +    + ++  ++  L ++   G     + P        P +SP+ 
Sbjct: 34  RTFTVREGTNFTAAMSPDATRIAIDLQGELRILPAKGGKA-VVVPGLSGESRLPSWSPDG 92

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +A+  Y       ++ +        +++    +    P +S++G+  L +  +    D
Sbjct: 93  KLIAF-QYYLGGYWHIFTVKPD-GSDLRQLSFGAADDREPVWSADGRSILFASDRAGNFD 150

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           I+SV L   A  +LT       S + + D  +I F +      +L +   +G    R+  
Sbjct: 151 IWSVGLDRAAPVQLTRAPEDEYSPAVATDG-RIAFVATAAKGSELRLRSVDG--AVRVVT 207

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQAPTW 397
              +    P WS  G  IA+  ++  +       ++ V      ++RL            
Sbjct: 208 ADPSRIALPAWSGDGSSIAYVAYASGRLGRRGEASLHVADATSGKDRLA----------- 256

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSID 422
           S +G  +  +R +    G  LY+ D
Sbjct: 257 SAAGEDVFVARPQSLPRGGWLYTAD 281



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 62/326 (19%), Positives = 112/326 (34%), Gaps = 50/326 (15%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSR-ILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           +  R+++   +DD            + R ILF S+   +      +  +  D A    LT
Sbjct: 115 SDLRQLSFGAADD-----REPVWSADGRSILFASDRAGN----FDIWSVGLDRAAPVQLT 165

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            + +   + P  + +  ++A+     +      L    +D A + +    S I  P +S 
Sbjct: 166 RAPED-EYSPAVATDG-RIAFVATAAKGSE---LRLRSVDGAVRVVTADPSRIALPAWSG 220

Query: 268 NGKRALIS------VQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVF 318
           +G            + +     ++  D  S   +RL +    ++        P    + +
Sbjct: 221 DGSSIAYVAYASGRLGRRGEASLHVADATSGK-DRLASAAGEDVFVARPQSLPRGGWL-Y 278

Query: 319 ESD----REGKE---------QLYVMQSNGSDQKRISQDKEA-----SYFDPVWSPQGDL 360
            +D    R+G              V  +    +KR      A         PV SP G  
Sbjct: 279 TADGVIKRQGTGAAATIPFAADFIVTPAPAYARKRHDFTSTAPKPVKGILHPVVSPDGKY 338

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLY 419
           +AFT  S     + ++K    +   L  D  +   P WSP G  L ++  + G     LY
Sbjct: 339 VAFTALSD----LWLLKIGDPKPVRLTNDPFVDIDPAWSPDGSRLAYTSDRRGVGTMDLY 394

Query: 420 SID-LNGRNETLINTPAYASDPQWVG 444
             D  +GR E L  T    + P +  
Sbjct: 395 VRDMASGREERLTETTESVAAPVFSP 420



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 40/109 (36%), Gaps = 8/109 (7%)

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPT 396
             R    +E + F    SP    IA          + ++   G +  ++       + P+
Sbjct: 32  PSRTFTVREGTNFTAAMSPDATRIAIDLQG----ELRILPAKGGKAVVVPGLSGESRLPS 87

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVG 444
           WSP G+ + F     G     ++++  +G +   ++   A   +P W  
Sbjct: 88  WSPDGKLIAFQYYLGGYW--HIFTVKPDGSDLRQLSFGAADDREPVWSA 134


>gi|116625466|ref|YP_827622.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228628|gb|ABJ87337.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 905

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 86/206 (41%), Gaps = 18/206 (8%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISA 307
           P+R+     + + P  S++GK    +  +  +  +DI+   +      RLT         
Sbjct: 341 PERLTLDLGLNIDPAISADGKFVAYASDRSGEGNLDIWVKQIGGGEPIRLTRNPADEREP 400

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + + + S R+G   +YV+   G +++R+  +       P +SP G  IA+ K  
Sbjct: 401 AFSPDGTSVAYRSVRDGG-GIYVVSMLGGEEQRLISEGRR----PRFSPDGKQIAYWKGL 455

Query: 368 GEKFAI-------GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            E F +        +  +  SQ R +  E +    P WSP G+ ++F   K+       +
Sbjct: 456 EEPFPVRAGSGTAYIFDRTTSQTRQIAPEFAAAVHPVWSPDGKHILFLGIKEDTKTLDWW 515

Query: 420 SIDLNGRNETL--INTPAYASDP-QW 442
            +   G       +N      DP +W
Sbjct: 516 FVPAAGGTAVRCHVNVSGSLVDPFEW 541



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 78/235 (33%), Gaps = 20/235 (8%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +  +P  S + + VAYA+    +      +       P R+    +    P FS +G  
Sbjct: 349 GLNIDPAISADGKFVAYASDRSGEGNLDIWVKQIGGGEPIRLTRNPADEREPAFSPDGTS 408

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------REG 324
                 +D    IY V +     +RL   +       +SPD  QI +          R G
Sbjct: 409 VAYRSVRDGGG-IYVVSMLGGEEQRL---ISEGRRPRFSPDGKQIAYWKGLEEPFPVRAG 464

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQ 382
               Y+     S  ++I+ +  A+   PVWSP G  I F   K   +      +   G  
Sbjct: 465 SGTAYIFDRTTSQTRQIAPE-FAAAVHPVWSPDGKHILFLGIKEDTKTLDWWFVPAAGGT 523

Query: 383 ER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                + V  S +    W       I+     G   +K+    ++      +  P
Sbjct: 524 AVRCHVNVSGSLVDPFEWRGD---FIYYETGAGTADAKIGKQQIDPATWQPVGKP 575



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 59/286 (20%), Positives = 96/286 (33%), Gaps = 31/286 (10%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +  +             S  SG     + V    G     LT +      EP FSP+   
Sbjct: 350 LNIDPAISADGKFVAYASDRSGEGNLDIWVKQIGGGEPIRLTRNPAD-EREPAFSPDGTS 408

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-------QK 278
           VAY +  D     +Y++        + I   R     PRFS +GK+             +
Sbjct: 409 VAYRSVRDGGG--IYVVSMLGGEEQRLISEGRR----PRFSPDGKQIAYWKGLEEPFPVR 462

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL--YVMQSNGS 336
             +   Y  D  ++ T ++       +   +SPD   I+F   +E  + L  + + + G 
Sbjct: 463 AGSGTAYIFDRTTSQTRQIAPEFAAAVHPVWSPDGKHILFLGIKEDTKTLDWWFVPAAGG 522

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKD-------GSQERLLVE 388
              R   +   S  DP +  +GD I +   +G     IG  + D       G   RL   
Sbjct: 523 TAVRCHVNVSGSLVDP-FEWRGDFIYYETGAGTADAKIGKQQIDPATWQPVGKPVRLTT- 580

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                +P+ S  G              + LYS+ LN     +   P
Sbjct: 581 -RADLSPSISLDGHM----AYAGIVRNTNLYSLPLNVNRGKVTGAP 621



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 82/247 (33%), Gaps = 19/247 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP----KRIGN 255
           GA       S + I      S + ++V Y             ++      P      I N
Sbjct: 619 GAPQGLTRDSGENIAR--SISADGRRVVYTADRAASPGGKATVEVWGRELPGGREHAITN 676

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                  P  S++GK       +    +I+    +     RL           +SPD S 
Sbjct: 677 DGKYKTLPEISADGKLVAWREARASIHEIFVTPFEGGPATRLCGDCG--GQPVWSPDGS- 733

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIG 374
           IV          L ++      QK   ++          +  G  +AFT   +G  + I 
Sbjct: 734 IVLAGQFSTPGALALVDVASVTQKIYMREPGLVLQARAITSDGKWLAFTAGKTGADYTIY 793

Query: 375 VMKKDGSQE-------RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           V + D ++        ++L        P WSP G  L F  + DG     L++  L+ R+
Sbjct: 794 VARFDAARAPVAAQWIKVLTSSEAHPYPRWSPDGTLLYFGSRLDGFNC--LWAQRLDPRS 851

Query: 428 ETLINTP 434
           +T +  P
Sbjct: 852 KTPVGRP 858



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQ 441
           ERL ++      P  S  G+ + ++  + G+    ++   + G     L   PA   +P 
Sbjct: 342 ERLTLDLGLNIDPAISADGKFVAYASDRSGEGNLDIWVKQIGGGEPIRLTRNPADEREPA 401

Query: 442 WVG 444
           +  
Sbjct: 402 FSP 404


>gi|111221034|ref|YP_711828.1| putative serine/threonine protein kinase [Frankia alni ACN14a]
 gi|111148566|emb|CAJ60239.1| Putative serine/threonine protein kinase [Frankia alni ACN14a]
          Length = 770

 Score =  130 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 65/297 (21%), Positives = 115/297 (38%), Gaps = 27/297 (9%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG--ANIRYLTPSRDQILFEPRFSPNQQK 225
               +   R   V  S  +G        +  DG   N + L    D     P  S +++ 
Sbjct: 476 PRSPEPLGRDTVVYASNRNGNYDLFRGDVTGDGGLQNDKPLLTGPDN-DMLPAISGDRKT 534

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA------PRFSSNGKRALISVQ-- 277
           V +      + L+    D    +  +   +  +  L       P  S +G+  ++     
Sbjct: 535 VVFFKKGSPNTLQAIAAD-GTGKPVQLFTSGPAANLTIANDARPSLSPDGEFLVVRSSTD 593

Query: 278 --KDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             +D+   +Y V L  ++  RL T     +   ++SPD  +I + S+  G ++ +V+  +
Sbjct: 594 EKRDQNPGLYIVRLDGSSVRRLKTKPQATD--PAWSPDGERIAYWSNNAGGDRGFVVVIS 651

Query: 335 GSD---QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DS 390
                  + +  DK  +  DPVWSP GD IAFT+       I  M  DGS  R L     
Sbjct: 652 VEPDAVAQPVINDKLTTDSDPVWSPNGDKIAFTREQNGDLEIFEMGSDGSDVRQLTHARG 711

Query: 391 NLQAPTWSPSGRSLIFSRKKD--GDTGSKLYSI---DLNGRNETLINTPAYASDPQW 442
           + Q P + P GR ++FS ++D       +L+ +   D    +  L     +    +W
Sbjct: 712 DDQDPAFGPDGR-IVFSGQRDPANPNARQLFVLNPNDPAAGDRQLTTLGGFNGHARW 767



 Score = 96.2 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 92/200 (46%), Gaps = 15/200 (7%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           TI++D   S++ + G+F   ++  S +         L ++  DG+++R L         +
Sbjct: 570 TIANDARPSLSPD-GEF---LVVRSSTDEKRDQNPGLYIVRLDGSSVRRLKT--KPQATD 623

Query: 217 PRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALI 274
           P +SP+ +++AY + +   D   V ++    D   + + N + +    P +S NG +   
Sbjct: 624 PAWSPDGERIAYWSNNAGGDRGFVVVISVEPDAVAQPVINDKLTTDSDPVWSPNGDKIAF 683

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----QLYV 330
           + +++  ++I+ +    +   +LT+    +   ++ PD  +IVF   R+       QL+V
Sbjct: 684 TREQNGDLEIFEMGSDGSDVRQLTHARGDDQDPAFGPDG-RIVFSGQRDPANPNARQLFV 742

Query: 331 MQSNG--SDQKRISQDKEAS 348
           +  N   +  ++++     +
Sbjct: 743 LNPNDPAAGDRQLTTLGGFN 762



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 67/208 (32%), Gaps = 21/208 (10%)

Query: 257 RSMILAPRFSSN--GK-RALISVQKDEAMDIYSVDLQS----NATERLTNTLFINISASY 309
                 PR S    G+   + +  ++   D++  D+         + L      ++  + 
Sbjct: 470 PGAFTLPR-SPEPLGRDTVVYASNRNGNYDLFRGDVTGDGGLQNDKPLLTGPDNDMLPAI 528

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA------SYFDPVWSPQGDLIAF 363
           S D   +VF           +         ++     A      +   P  SP G+ +  
Sbjct: 529 SGDRKTVVFFKKGSPNTLQAIAADGTGKPVQLFTSGPAANLTIANDARPSLSPDGEFLVV 588

Query: 364 TKFSGEKFA----IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
              + EK      + +++ DGS  R L        P WSP G  + +     G     + 
Sbjct: 589 RSSTDEKRDQNPGLYIVRLDGSSVRRLKTKPQATDPAWSPDGERIAYWSNNAGGDRGFVV 648

Query: 420 SIDL--NGRNETLINTP-AYASDPQWVG 444
            I +  +   + +IN      SDP W  
Sbjct: 649 VISVEPDAVAQPVINDKLTTDSDPVWSP 676


>gi|320161703|ref|YP_004174928.1| hypothetical protein ANT_23020 [Anaerolinea thermophila UNI-1]
 gi|319995557|dbj|BAJ64328.1| hypothetical protein ANT_23020 [Anaerolinea thermophila UNI-1]
          Length = 645

 Score =  130 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 92/231 (39%), Gaps = 20/231 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F  + +++    Y  + +    L  T  D             + P  S +G R   +  +
Sbjct: 104 FMRDGERIHLFAYHPKFLPLTRLTRTAWDE------------MHPSLSPDGNRLAFTSHQ 151

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   D++ +DL +  T+++T +     + ++SPD   + +E+ R  +  +Y+   N   Q
Sbjct: 152 NGYWDLFILDLTTGETQQITQSPEYEGAPTWSPDGQWLAYEAYRNEQLDIYLQSLNDLSQ 211

Query: 339 KRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--- 394
             I   D  A+  DP WSP G  IAF         I +   D  +ER +    + ++   
Sbjct: 212 PPIQLTDDPAADSDPAWSPGGRTIAFVSTRTGDAEIWLANLDKPEERFVNISRDPRSADL 271

Query: 395 -PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            P WS  GR L ++ +K+ +     +    +   +      AY  D  W  
Sbjct: 272 NPVWSNDGRYLAYATRKESEHRILTWD---SQNPQDPAVMSAYGDDVAWTP 319



 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 10/179 (5%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L+ ++  E + +++   +     RLT T +  +  S SPD +++ F S + G   L+++
Sbjct: 101 LLLFMRDGERIHLFAYHPKFLPLTRLTRTAWDEMHPSLSPDGNRLAFTSHQNGYWDLFIL 160

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVED 389
                + ++I+Q  E     P WSP G  +A+  +  E+  I +   +        L +D
Sbjct: 161 DLTTGETQQITQSPEYE-GAPTWSPDGQWLAYEAYRNEQLDIYLQSLNDLSQPPIQLTDD 219

Query: 390 SNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS----DPQWV 443
               + P WSP GR++ F   + GD  ++++  +L+   E  +N          +P W 
Sbjct: 220 PAADSDPAWSPGGRTIAFVSTRTGD--AEIWLANLDKPEERFVNISRDPRSADLNPVWS 276



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 93/255 (36%), Gaps = 16/255 (6%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D ++I    +        ++  T  D+++ S++ +      R+ F S           L 
Sbjct: 107 DGERIHLFAYHPKFLPLTRLTRTAWDEMHPSLSPDGN----RLAFTSHQ----NGYWDLF 158

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           ++D      + +T S +     P +SP+ Q +AY  Y +E +         + + P ++ 
Sbjct: 159 ILDLTTGETQQITQSPE-YEGAPTWSPDGQWLAYEAYRNEQLDIYLQSLNDLSQPPIQLT 217

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSP 311
           +  +    P +S  G+       +    +I+  +L       +    +    +++  +S 
Sbjct: 218 DDPAADSDPAWSPGGRTIAFVSTRTGDAEIWLANLDKPEERFVNISRDPRSADLNPVWSN 277

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   + + + +E + ++    S       +     A   D  W+P      F+       
Sbjct: 278 DGRYLAYATRKESEHRILTWDSQNPQDPAVM---SAYGDDVAWTPDEQW-MFSTLEQPNQ 333

Query: 372 AIGVMKKDGSQERLL 386
              ++   GS +RL+
Sbjct: 334 HALLVSLRGSLQRLI 348



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 11/97 (11%)

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTG 415
           +G L+ F +  GE+  +            L   +  +  P+ SP G  L F+  ++G   
Sbjct: 98  EGVLLLFMR-DGERIHLFAYHPKFLPLTRLTRTAWDEMHPSLSPDGNRLAFTSHQNGYW- 155

Query: 416 SKLYSIDLN-GRNETLINTP------AYASDPQWVGF 445
             L+ +DL  G  + +  +P       ++ D QW+ +
Sbjct: 156 -DLFILDLTTGETQQITQSPEYEGAPTWSPDGQWLAY 191


>gi|119472449|ref|ZP_01614548.1| Tol biopolymer transport system component [Alteromonadales
           bacterium TW-7]
 gi|119444886|gb|EAW26185.1| Tol biopolymer transport system component [Alteromonadales
           bacterium TW-7]
          Length = 153

 Score =  130 bits (327), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 61/140 (43%), Gaps = 5/140 (3%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSK 71
           K+ +  +++L+G  F    +A +++          P++I   K+  I  +  K+S+V++ 
Sbjct: 4   KLRVACVVLLLG--FQGIANAALEIVITEGVDGARPIAIVPFKYTGIGPIPQKLSDVIAA 61

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL RS  F  +      Q+  + D    +  W + G + ++ G+V ++   R  V + L 
Sbjct: 62  DLVRSGKFKPVDVAQMPQQP-SEDQAIDYASWVNQGVEAVLVGQVEQQTDGRYLVRYELV 120

Query: 132 DVKDRKQIIGKKFFSSPASW 151
           DV   +   G     S    
Sbjct: 121 DVIRGQITGGNTQMMSNGQL 140


>gi|52081717|ref|YP_080508.1| putative acylaminoacyl-peptidase YuxL [Bacillus licheniformis ATCC
           14580]
 gi|52787103|ref|YP_092932.1| YuxL [Bacillus licheniformis ATCC 14580]
 gi|52004928|gb|AAU24870.1| putative acylaminoacyl-peptidase YuxL [Bacillus licheniformis ATCC
           14580]
 gi|52349605|gb|AAU42239.1| YuxL [Bacillus licheniformis ATCC 14580]
          Length = 653

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 95/265 (35%), Gaps = 47/265 (17%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNG 269
           + +P++SP+  K+AY      +    Y     I    K+        +     PR+S +G
Sbjct: 16  ITDPQYSPDGAKIAYVQTKVNEKQDSYDSHIMIYDREKQASVQWTFGKGRNQHPRWSPDG 75

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------------ 317
           K    +  ++E   IY +        ++T+  +      +SPD   ++            
Sbjct: 76  KYLAFTSNREETAQIYVISAAGGEARKVTDIPYDVSQPEWSPDGKSLLCSVKLTKEESVD 135

Query: 318 -------------------FESD-----REGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                              +++D     R    QL ++Q    + K+++ D E  +F   
Sbjct: 136 DEKKTEIEDHEPLEVDSLSYKADGQGFKRGKYTQLVLVQVETGEMKQLT-DLERDHFSHA 194

Query: 354 WSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKK 410
           +SP GD IAF     +     + +M       + L  ++    + ++SP G+ L F   +
Sbjct: 195 FSPCGDQIAFCANQTDMRVNDVYLMNLSTGDLKRLTGQNGIFSSLSFSPDGKHLAFIGNE 254

Query: 411 DGDTGSKL---YSIDLNGRNETLIN 432
                + L   +  D+     T + 
Sbjct: 255 KEYQNATLDKAWLYDIETGKLTCLT 279



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 10/105 (9%)

Query: 348 SYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPS 400
           S  DP +SP G  IA+       K       I +  ++              Q P WSP 
Sbjct: 15  SITDPQYSPDGAKIAYVQTKVNEKQDSYDSHIMIYDREKQASVQWTFGKGRNQHPRWSPD 74

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
           G+ L F+  +  +  +++Y I   G     + + P   S P+W  
Sbjct: 75  GKYLAFTSNR--EETAQIYVISAAGGEARKVTDIPYDVSQPEWSP 117



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 78/265 (29%), Gaps = 58/265 (21%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------------------------ 227
            + V+   G   R +T      + +P +SP+ + +                         
Sbjct: 89  QIYVISAAGGEARKVTD-IPYDVSQPEWSPDGKSLLCSVKLTKEESVDDEKKTEIEDHEP 147

Query: 228 -----------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
                         +      ++ L+        K++ +      +  FS  G +     
Sbjct: 148 LEVDSLSYKADGQGFKRGKYTQLVLVQVETGEM-KQLTDLERDHFSHAFSPCGDQIAFCA 206

Query: 277 QKDEAM--DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-----LY 329
            + +    D+Y ++L +   +RLT    I  S S+SPD   + F  + +  +       +
Sbjct: 207 NQTDMRVNDVYLMNLSTGDLKRLTGQNGIFSSLSFSPDGKHLAFIGNEKEYQNATLDKAW 266

Query: 330 VMQSNGSDQKRISQDKEASYFD--------------PVWSPQGDLIAFTKFSGEKFAIGV 375
           +          +++  +    D              P W+  G+             I  
Sbjct: 267 LYDIETGKLTCLTEMLDVHLSDAVAGDSLVGGVLPKPAWTKDGNGFYVIGSDQGSTGIYY 326

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPS 400
           +  +G    + +E  ++   +  P 
Sbjct: 327 ISIEGLAYPVRLEKEHVNGFSLHPD 351


>gi|297184122|gb|ADI20241.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 365

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 93/253 (36%), Gaps = 37/253 (14%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL--------RVYLMDTRIDRAPKRIGNF 256
           Y  P    IL+   F  +    A     +             +Y+ D         I + 
Sbjct: 112 YFMPGDSTILYASTFRGDTACPAVPERGESGAYVWPIYADFDIYISDLNGHIVDTLI-SG 170

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                    S +G + + +  +   +++Y+ D+  +   ++T  L  +  A +SPDS ++
Sbjct: 171 PGYDAEATVSPDGTKIVFTSDRSGDLELYTCDIDGSNIVQVTTGLGYDGGAFFSPDSKKL 230

Query: 317 VFESDR--------------------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           VF S R                        ++Y    +GS+  +++Q   A++  P + P
Sbjct: 231 VFRSSRPQTEEEVKKYKDLLSQGMVEPTHMEIYTCNVDGSELTQVTQLGNANW-APFYHP 289

Query: 357 QGDLIAFT----KFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKK- 410
            G  I F+       G  F + ++  DG+    +  D    A P +S     L+F+  + 
Sbjct: 290 SGTKIIFSTNHHSERGYPFNLFMINADGTGLEQVTYDGVFDAFPMFSSDCSKLVFASNRN 349

Query: 411 -DGDTGSKLYSID 422
             G   + L+ +D
Sbjct: 350 NGGSRATNLFIVD 362



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 70/200 (35%), Gaps = 38/200 (19%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-- 323
           S++G        K    +   ++       +LTN    N  A +S D + + F+S+ E  
Sbjct: 22  SADGASGATWESKISYDEEIHLE----GIRQLTNG-GDNAEAYFSFDGTMLTFQSNAEKW 76

Query: 324 GK--EQLYVMQSN-----GSDQKRISQD---------------------KEASYFDPVWS 355
           G   +Q+Y    N       + + IS D                            P   
Sbjct: 77  GNKCDQIYAFDWNADTIWDKEPQLISNDLGRTTCAYFMPGDSTILYASTFRGDTACPAVP 136

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            +G+  A+       F I +   +G     L+         T SP G  ++F+  + GD 
Sbjct: 137 ERGESGAYVWPIYADFDIYISDLNGHIVDTLISGPGYDAEATVSPDGTKIVFTSDRSGD- 195

Query: 415 GSKLYSIDLNGRNETLINTP 434
             +LY+ D++G N   + T 
Sbjct: 196 -LELYTCDIDGSNIVQVTTG 214


>gi|260062216|ref|YP_003195296.1| hypothetical protein RB2501_11502 [Robiginitalea biformata
           HTCC2501]
 gi|88783778|gb|EAR14949.1| hypothetical protein RB2501_11502 [Robiginitalea biformata
           HTCC2501]
          Length = 1150

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 85/205 (41%), Gaps = 21/205 (10%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +   ++   S +G+     +  D    IY++         LT  L   +   +SPD   +
Sbjct: 58  QGTWISLDVSPDGQTIAFDLMGD----IYTIPATGGTATALTRGLPYEVHPRFSPDGKSL 113

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           ++ SD+ G E +++M     ++ ++++ +   YF   WSP G  +           + + 
Sbjct: 114 LYISDKSGSENIWIMDLESREETQLTKSENKHYFSADWSPDGTYVVGAAGR-RNIKLHLY 172

Query: 377 KKDGSQERLLVEDSNL---QAPTWSPSGRSLIFSRKKDG-DTGSKL--YSIDL----NGR 426
            ++G     L++         P +SP G+ + FSR+    +  ++L  Y I      +G 
Sbjct: 173 HREGGGGSQLLDKPENLKTIDPAFSPDGKRIYFSRRTGAWNYNAQLPQYQIGTYDMEDGG 232

Query: 427 NETLIN------TPAYASDPQWVGF 445
           +  + +      TP  + D +W+ F
Sbjct: 233 SAVITSRYGSAFTPTPSPDGKWLVF 257



 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 18/227 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ Q +A+      DI  +             +       + PRFS +GK  L    K 
Sbjct: 67  SPDGQTIAFDLM--GDIYTI----PATGGTATALTRGLPYEVHPRFSPDGKSLLYISDKS 120

Query: 280 EAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            + +I+ +DL+S    +LT +   +  SA +SPD + +V  + R   +     +  G   
Sbjct: 121 GSENIWIMDLESREETQLTKSENKHYFSADWSPDGTYVVGAAGRRNIKLHLYHREGGGGS 180

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------KFAIGVMKK-DGSQERLLVED 389
           + + + +     DP +SP G  I F++ +G         ++ IG     DG    +    
Sbjct: 181 QLLDKPENLKTIDPAFSPDGKRIYFSRRTGAWNYNAQLPQYQIGTYDMEDGGSAVITSRY 240

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            +   PT SP G+ L+F  + +  TG +L   +L    E  +  P  
Sbjct: 241 GSAFTPTPSPDGKWLVFGSRYEEHTGLRLR--NLETGEERWLAYPVQ 285



 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 62/316 (19%), Positives = 108/316 (34%), Gaps = 50/316 (15%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI-LFEPRFSPNQQKVAY 228
             D++    +V     +G     L +  R+G     L    + +   +P FSP+ +++ +
Sbjct: 148 SADWSPDGTYVV--GAAGRRNIKLHLYHREGGGGSQLLDKPENLKTIDPAFSPDGKRIYF 205

Query: 229 ATYDDEDILRVYLMDTRIDRA------PKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           +           L   +I            I +       P  S +GK  +   + +E  
Sbjct: 206 SRRTGAWNYNAQLPQYQIGTYDMEDGGSAVITSRYGSAFTPTPSPDGKWLVFGSRYEEHT 265

Query: 283 DIYSVDLQSNATERLTNTLFINISAS-----------YSPDSSQIVFESDREGKEQLYVM 331
            +   +L++     L   +  +   S           +SPDS ++ F S       L + 
Sbjct: 266 GLRLRNLETGEERWLAYPVQRDEQESIAPLGVLPAMAFSPDSKEL-FLSYGGKIRALSIA 324

Query: 332 QSNGSDQK-----------RISQDKEASY---------FDPVWSPQGDLIAFTKFSGEKF 371
            ++  +             R+      S           D V SP G  +AFT  +    
Sbjct: 325 DNSVREIPFTAPVSLDLGPRLDFKYPISDAPELPVTQIRDAVPSPDGKHLAFTALN---- 380

Query: 372 AIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN--E 428
            + VM+      R L +    +A P WSP G  L+FS  + G  G  LY +  +GR    
Sbjct: 381 RLYVMELPDGAPRRLTDHEFTEAQPAWSPDGGELVFSGWQPG--GGHLYKVRTDGRGGAR 438

Query: 429 TLINTPAYASDPQWVG 444
            +   P   S P W  
Sbjct: 439 AITRVPGIYSQPAWSY 454



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 90/277 (32%), Gaps = 29/277 (10%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           S   ++G + S  +      ++  +   +  +   G     LT         PRFSP+ +
Sbjct: 53  SFQAQQGTWISLDVSPDGQTIAFDLMGDIYTIPATGGTATALTRGL-PYEVHPRFSPDGK 111

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            + Y + D      +++MD       +   +      +  +S +G   ++       + +
Sbjct: 112 SLLYIS-DKSGSENIWIMDLESREETQLTKSENKHYFSADWSPDGTY-VVGAAGRRNIKL 169

Query: 285 YSVDLQSNATERLTNTLFI--NISASYSPDSSQIVFESDREG---------KEQLYVMQS 333
           +    +     +L +       I  ++SPD  +I F S R G         + Q+     
Sbjct: 170 HLYHREGGGGSQLLDKPENLKTIDPAFSPDGKRIYF-SRRTGAWNYNAQLPQYQIGTYDM 228

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---- 389
                  I+  +  S F P  SP G  + F     E   + +   +  +ER L       
Sbjct: 229 EDGGSAVITS-RYGSAFTPTPSPDGKWLVFGSRYEEHTGLRLRNLETGEERWLAYPVQRD 287

Query: 390 --------SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                     L A  +SP  + L F           +
Sbjct: 288 EQESIAPLGVLPAMAFSPDSKEL-FLSYGGKIRALSI 323



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 82/244 (33%), Gaps = 40/244 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--------MILAPRF---- 265
            FSP+ +++  +       L +     R       +             +  AP      
Sbjct: 302 AFSPDSKELFLSYGGKIRALSIADNSVREIPFTAPVSLDLGPRLDFKYPISDAPELPVTQ 361

Query: 266 ------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                 S +GK    +        +Y ++L   A  RLT+  F     ++SPD  ++VF 
Sbjct: 362 IRDAVPSPDGKHLAFTA----LNRLYVMELPDGAPRRLTDHEFTEAQPAWSPDGGELVFS 417

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------------F 366
             + G   LY ++++G    R        Y  P WS   D I F +              
Sbjct: 418 GWQPGGGHLYKVRTDGRGGARAITRVPGIYSQPAWSYNSDRIVFLRGYAQAYDEGTGPNT 477

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            G +  +  +  DG  + L+ +      P ++     +  S  + G     L S+  +G 
Sbjct: 478 RGSREDLVWIPSDGGAQTLIDKSEGRTTPHFTRGDDRIYLSHPQRG-----LLSLRWDGT 532

Query: 427 NETL 430
           +E  
Sbjct: 533 DEKQ 536



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/277 (12%), Positives = 86/277 (31%), Gaps = 68/277 (24%)

Query: 191 NSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           N L VM+  DGA  R      +    +P +SP+  ++ ++ +       +Y + T     
Sbjct: 380 NRLYVMELPDGAPRR--LTDHEFTEAQPAWSPDGGELVFSGWQPGGG-HLYKVRTDGRGG 436

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISV-------------QKDEAMDIYSVDLQSNATER 296
            + I     +   P +S N  R +                 +    D+  +     A   
Sbjct: 437 ARAITRVPGIYSQPAWSYNSDRIVFLRGYAQAYDEGTGPNTRGSREDLVWIPSDGGAQTL 496

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR---------------I 341
           +  +     +  ++      ++ S  +    L  ++ +G+D+K+               +
Sbjct: 497 IDKSEGR-TTPHFTR-GDDRIYLSHPQ--RGLLSLRWDGTDEKQHLILKGIETYGSRDIL 552

Query: 342 SQDKEASYF-------------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           ++     +                    +   SP G   A  + + + +++ V +   + 
Sbjct: 553 TESGHGGHRLLPPDSGLREEDDKASRPAEVRISPDGKR-ALAQINNDIYSVHVPRYGKTP 611

Query: 383 ERLLVEDSNL------------QAPTWSPSGRSLIFS 407
              + +  +             + P WS     + +S
Sbjct: 612 TVSVAKPGDAAFPAVKLTQLGGEFPAWSGDSGKVHWS 648


>gi|307610341|emb|CBW99909.1| hypothetical protein LPW_16671 [Legionella pneumophila 130b]
          Length = 656

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 65/306 (21%), Positives = 113/306 (36%), Gaps = 58/306 (18%)

Query: 195 VMDRDGANIRYLTP----SRDQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTR 245
           V+  DG   + L       R Q + EP  SP+ + VAY               V+ +   
Sbjct: 13  VVFHDGWAGKRLPELDDLYRIQDISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVD 72

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFI 303
              + +      S    P++S NGK         K+    I+   +Q N   +LT     
Sbjct: 73  SKSSQQITFAEDSSSSLPKWSPNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTYIDGE 132

Query: 304 NISASYSPDSSQIVFE---SDRE------------------------GKEQLYVMQSNGS 336
               ++SPDS++I F    SD                          G++ LY+++    
Sbjct: 133 VSDFTWSPDSNRIAFIAQKSDPSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSK 192

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKK-DGSQERLLVE- 388
              +++ D     + P WSP G  IAF    G+       + I +++   G++ER L   
Sbjct: 193 AITQLT-DGNHDEYLPAWSPDGKYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKERQLTHF 251

Query: 389 DSNLQAP------TWSPSGRSLIFSRKKDGDTG----SKLYSIDLNGRNETLI-NTPAYA 437
             +   P      +WSP    + + R  +        ++L  ID+N ++E +I     + 
Sbjct: 252 PGSDMNPDYDSNLSWSPDSSKIAYLRSNEHQWTYYSPNQLAIIDINTKDEKIIAPRDNWY 311

Query: 438 SDPQWV 443
             P+W 
Sbjct: 312 YKPKWS 317



 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 101/291 (34%), Gaps = 47/291 (16%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           DI +      G + +  +    +    I    +  +  D  + + +T + D     P++S
Sbjct: 35  DISEPDLSPDGKWVAYTV-SQLNAKDNISTTEVWKVSVDSKSSQQITFAEDSSSSLPKWS 93

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD- 279
           PN + +AY +   ++      + +  D    ++      +    +S +  R     QK  
Sbjct: 94  PNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTYIDGEVSDFTWSPDSNRIAFIAQKSD 153

Query: 280 --------------------------EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                                         +Y V+L+S A  +LT+        ++SPD 
Sbjct: 154 PSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYLPAWSPDG 213

Query: 314 SQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDP------VWSPQGDLI 361
             I F +      DR     +Y+++     ++R       S  +P       WSP    I
Sbjct: 214 KYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKERQLTHFPGSDMNPDYDSNLSWSPDSSKI 273

Query: 362 AFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLI 405
           A+ + +  ++       + ++  +   E+++    N    P WS  G+ + 
Sbjct: 274 AYLRSNEHQWTYYSPNQLAIIDINTKDEKIIAPRDNWYYKPKWSQDGKFIY 324



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 86/234 (36%), Gaps = 50/234 (21%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINIS-ASYSPD 312
           I  P  S +GK    +V +  A D      ++ V + S +++++T     + S   +SP+
Sbjct: 36  ISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQQITFAEDSSSSLPKWSPN 95

Query: 313 SSQIVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-- 368
              + + SD  +EG  Q+++     + + +++   +    D  WSP  + IAF       
Sbjct: 96  GKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTYI-DGEVSDFTWSPDSNRIAFIAQKSDP 154

Query: 369 -------------------------EKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGR 402
                                     +  + +++        L + ++ +  P WSP G+
Sbjct: 155 SNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYLPAWSPDGK 214

Query: 403 SLIFSRKKDGD----TGSKLYSIDL-NGRNETLINT-PAYASDP------QWVG 444
            + F  K+  D        +Y I+  +G  E  +   P    +P       W  
Sbjct: 215 YIAFVTKRGKDPDRHFNYDIYLIEPKSGAKERQLTHFPGSDMNPDYDSNLSWSP 268



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 92/258 (35%), Gaps = 50/258 (19%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-------- 228
           + ++S+    G  +  +  +     N  +     D  + +  +SP+  ++A+        
Sbjct: 99  LAYLSDGGKEGTTQIWIASVQD---NKEHQLTYIDGEVSDFTWSPDSNRIAFIAQKSDPS 155

Query: 229 ------------------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
                               Y  +    +YL++ +  +A  ++ +       P +S +GK
Sbjct: 156 NEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELK-SKAITQLTDGNHDEYLPAWSPDGK 214

Query: 271 RALISVQKD------EAMDIYSVDLQSN-ATERLTNTLFINISA------SYSPDSSQIV 317
                 ++          DIY ++ +S     +LT+    +++       S+SPDSS+I 
Sbjct: 215 YIAFVTKRGKDPDRHFNYDIYLIEPKSGAKERQLTHFPGSDMNPDYDSNLSWSPDSSKIA 274

Query: 318 FESDREGK------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +    E +       QL ++  N  D+K I+      Y+ P WS  G  I          
Sbjct: 275 YLRSNEHQWTYYSPNQLAIIDINTKDEKIIAPRDNW-YYKPKWSQDGKFIYALIEESRNT 333

Query: 372 AIGVMKKDGSQERLLVED 389
            +  +    +Q + L   
Sbjct: 334 YLNRIDIHSAQIKKLTGG 351



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 41/182 (22%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               SPD   + +        D     +++ +  +    ++I+  +++S   P WSP G 
Sbjct: 38  EPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQQITFAEDSSSSLPKWSPNGK 97

Query: 360 LIAFTKFSG--EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD----- 411
            +A+    G      I +     ++E  L   D  +   TWSP    + F  +K      
Sbjct: 98  WLAYLSDGGKEGTTQIWIASVQDNKEHQLTYIDGEVSDFTWSPDSNRIAFIAQKSDPSNE 157

Query: 412 --------------------GDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVG 444
                               G     LY ++L  +  T +         PA++ D +++ 
Sbjct: 158 EEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYLPAWSPDGKYIA 217

Query: 445 FM 446
           F+
Sbjct: 218 FV 219



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/208 (12%), Positives = 71/208 (34%), Gaps = 20/208 (9%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-----VYL 241
           G  ++ L +++     I  LT       + P +SP+ + +A+ T   +D  R     +YL
Sbjct: 178 GKGRDHLYLVELKSKAITQLTDGNHD-EYLPAWSPDGKYIAFVTKRGKDPDRHFNYDIYL 236

Query: 242 MDTRIDRAPKRIGNFRSMILAP------RFSSNGKRALISVQKDEAM------DIYSVDL 289
           ++ +     +++ +F    + P       +S +  +       +          +  +D+
Sbjct: 237 IEPKSGAKERQLTHFPGSDMNPDYDSNLSWSPDSSKIAYLRSNEHQWTYYSPNQLAIIDI 296

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +   + +           +S D   I    +      L  +  + +  K+++       
Sbjct: 297 NTKDEKIIAPRDNWYYKPKWSQDGKFIYALIEESRNTYLNRIDIHSAQIKKLTGGLRYDM 356

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              +   +G +I  T        + ++ 
Sbjct: 357 DYSL--AKGKIILLTTDDTHPSELFILN 382



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 62/173 (35%), Gaps = 17/173 (9%)

Query: 176 RILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQILFEP------RFSPNQQKVA 227
            I FV++            + +++                   P       +SP+  K+A
Sbjct: 215 YIAFVTKRGKDPDRHFNYDIYLIEPKSGAKERQLTHFPGSDMNPDYDSNLSWSPDSSKIA 274

Query: 228 Y-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           Y       +      ++ ++D    +  K I    +    P++S +GK     +++    
Sbjct: 275 YLRSNEHQWTYYSPNQLAIIDINT-KDEKIIAPRDNWYYKPKWSQDGKFIYALIEESRNT 333

Query: 283 DIYSVDLQSNATERLTNTLFINISASYS-PDSSQIVFESDREGKEQLYVMQSN 334
            +  +D+ S   ++LT  L  ++   YS      I+  +D     +L+++ S 
Sbjct: 334 YLNRIDIHSAQIKKLTGGLRYDMD--YSLAKGKIILLTTDDTHPSELFILNSG 384



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 28/60 (46%), Gaps = 6/60 (10%)

Query: 391 NLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLINTPAYASD--PQWVG 444
           ++  P  SP G+ + ++  +    D  + ++++ + ++ ++   I     +S   P+W  
Sbjct: 35  DISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQQITFAEDSSSSLPKWSP 94


>gi|312886639|ref|ZP_07746246.1| amidohydrolase [Mucilaginibacter paludis DSM 18603]
 gi|311300741|gb|EFQ77803.1| amidohydrolase [Mucilaginibacter paludis DSM 18603]
          Length = 1078

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 80/212 (37%), Gaps = 25/212 (11%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                  +    S +G+  +  +  D    IY++ +       L      ++   +SPD 
Sbjct: 38  TTDEGTWMDLDVSPDGRTIVFDLLGD----IYAMPITGGKATLLAGGKAWDVQPRFSPDG 93

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FT-KFSG 368
             I + SD +G + +++M ++G +++ ++++      +  W+P G  +     FT   S 
Sbjct: 94  KSISYTSDHDGGDNIWLMNADGGNKRPVTKENFRLLNNASWTPDGQYLVARKHFTGSRSL 153

Query: 369 EKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRK--------KDGDTGS 416
               + +  K+G     L     +  +   P  SP G+ + +S           + D  +
Sbjct: 154 GAGEMWLYYKNGGDGIQLTKRKNDQQDAGEPVASPDGKYIYWSEDITPGPSFQYNKDPNA 213

Query: 417 KLYSIDL----NGRNETLINTPAYASDPQWVG 444
            +Y+I       G  ET+      A  PQ   
Sbjct: 214 GIYAIKRLNRETGEIETVAGGAGGACRPQLSP 245



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 100/263 (38%), Gaps = 46/263 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------------ 265
            ++P+ + + +  Y    I  + +    +   P  + + +++  A  F            
Sbjct: 297 AWTPDSKNIIF--YAKGKIWNLDVASLNVANIPFDVTSTQTISDALHFPQKVFQDEFTVK 354

Query: 266 -------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                  S +GK        + A  IY+  L +   +R+T    +     +SPD   +V+
Sbjct: 355 MIRQLTTSPDGKMVAF----NAAGYIYTKALPNGVPQRITTGTDLEYEPEFSPDGKSLVY 410

Query: 319 ESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------ 371
            S  +  K  +  +        R++ D+   Y+ P ++ +GD I + K  G +       
Sbjct: 411 VSWADEMKGSINTIDLTTHLIMRLTTDR-GYYYSPKYANRGDKIIYRKGEGNEVLGYFFG 469

Query: 372 ---AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               I ++   G + +L++ +     P +S     + +   +      K+  +D++G N+
Sbjct: 470 NAPGIYIIPVTGGKPQLVINNG--IHPQFSADDSKIYYQSSEGDKKAFKV--MDVSGANQ 525

Query: 429 TLINTPAYA------SDPQWVGF 445
             + T  YA       D +W+ F
Sbjct: 526 KTLYTSTYATQFAPSPDGKWMAF 548



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 90/231 (38%), Gaps = 30/231 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + + +    D     +Y M          +   ++  + PRFS +GK    +   D
Sbjct: 50  SPDGRTIVFDLLGD-----IYAMPI-TGGKATLLAGGKAWDVQPRFSPDGKSISYTSDHD 103

Query: 280 EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVMQS 333
              +I+ ++        +T   F +  +AS++PD   +V    F   R  G  ++++   
Sbjct: 104 GGDNIWLMNADGGNKRPVTKENFRLLNNASWTPDGQYLVARKHFTGSRSLGAGEMWLYYK 163

Query: 334 NGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKF-------------SGEKFAIGVMKK 378
           NG D  ++++ K       +PV SP G  I +++              +   +AI  + +
Sbjct: 164 NGGDGIQLTKRKNDQQDAGEPVASPDGKYIYWSEDITPGPSFQYNKDPNAGIYAIKRLNR 223

Query: 379 DGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +  +   +         P  SP  + + F ++      S LY  +L  + E
Sbjct: 224 ETGEIETVAGGAGGACRPQLSPDNKLMAFVKRD--RLKSVLYIKNLETQEE 272



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 72/198 (36%), Gaps = 20/198 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + VA+      +           +  P+RI     +   P FS +GK  +     D
Sbjct: 362 SPDGKMVAF------NAAGYIYTKALPNGVPQRITTGTDLEYEPEFSPDGKSLVYVSWAD 415

Query: 280 E-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---------KEQLY 329
           E    I ++DL ++   RLT       S  Y+    +I++                  +Y
Sbjct: 416 EMKGSINTIDLTTHLIMRLTTDRGYYYSPKYANRGDKIIYRKGEGNEVLGYFFGNAPGIY 475

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++   G   + +  +       P +S     I +    G+K A  VM   G+ ++ L   
Sbjct: 476 IIPVTGGKPQLVINNG----IHPQFSADDSKIYYQSSEGDKKAFKVMDVSGANQKTLYTS 531

Query: 390 SNLQAPTWSPSGRSLIFS 407
           +       SP G+ + F+
Sbjct: 532 TYATQFAPSPDGKWMAFT 549



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 62/339 (18%), Positives = 118/339 (34%), Gaps = 61/339 (17%)

Query: 98  PRFQDWN--SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
           P F  W   S        G++       L V    +DV   +                  
Sbjct: 294 PNF-AWTPDSKNIIFYAKGKIWNLDVASLNVANIPFDVTSTQ------------------ 334

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK------NSLCVMDRDGANIRYLTPS 209
            TISD ++      + +F  +++    +   G +               +G   + +T  
Sbjct: 335 -TISDALHFPQKVFQDEFTVKMIRQLTTSPDGKMVAFNAAGYIYTKALPNG-VPQRITTG 392

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            D + +EP FSP+ + + Y ++ DE    +  +D        R+   R    +P++++ G
Sbjct: 393 TD-LEYEPEFSPDGKSLVYVSWADEMKGSINTIDL-TTHLIMRLTTDRGYYYSPKYANRG 450

Query: 270 KRALIS---------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            + +                A  IY + +     + + N     I   +S D S+I ++S
Sbjct: 451 DKIIYRKGEGNEVLGYFFGNAPGIYIIPVTGGKPQLVINNG---IHPQFSADDSKIYYQS 507

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
               K+   VM  +G++QK +     A+ F P  SP G  +AFT    E F   +     
Sbjct: 508 SEGDKKAFKVMDVSGANQKTLYTSTYATQFAP--SPDGKWMAFT----ELFNCYITPMIT 561

Query: 381 SQERLLVEDSNLQAP------------TWSPSGRSLIFS 407
           +     +   N   P             WS   + ++++
Sbjct: 562 TGGAQDLSAGNKAIPLNRLTRDAGTYLHWSKDSQHIMWT 600



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 96/291 (32%), Gaps = 42/291 (14%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            T ++G +    +      +   +   +  M   G     L         +PRFSP+ + 
Sbjct: 37  FTTDEGTWMDLDVSPDGRTIVFDLLGDIYAMPITGGKA-TLLAGGKAWDVQPRFSPDGKS 95

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-E 280
           ++Y +  D       +     ++ P    NFR +  A  ++ +G+  +     +  +   
Sbjct: 96  ISYTSDHDGGDNIWLMNADGGNKRPVTKENFRLLNNA-SWTPDGQYLVARKHFTGSRSLG 154

Query: 281 AMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESD-------------REG 324
           A +++          +LT   N          SPD   I +  D               G
Sbjct: 155 AGEMWLYYKNGGDGIQLTKRKNDQQDAGEPVASPDGKYIYWSEDITPGPSFQYNKDPNAG 214

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              +  +     + + ++         P  SP   L+AF K    K  + +   +  +E 
Sbjct: 215 IYAIKRLNRETGEIETVA-GGAGGACRPQLSPDNKLMAFVKRDRLKSVLYIKNLETQEEW 273

Query: 385 LLVED------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            + ++                   W+P  +++IF  K       K++++D+
Sbjct: 274 PVYDNLSHDQQETWAIFGVYPNFAWTPDSKNIIFYAK------GKIWNLDV 318



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 103/309 (33%), Gaps = 55/309 (17%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRD--QILFEPRFSPNQQKVAYATYDDEDILR 238
             +    +    + +  ++G +   LT  ++  Q   EP  SP+ + + ++         
Sbjct: 146 HFTGSRSLGAGEMWLYYKNGGDGIQLTKRKNDQQDAGEPVASPDGKYIYWSEDITPGPSF 205

Query: 239 VYLMD-----------TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            Y  D            R     + +         P+ S + K      +      +Y  
Sbjct: 206 QYNKDPNAGIYAIKRLNRETGEIETVAGGAGGACRPQLSPDNKLMAFVKRDRLKSVLYIK 265

Query: 288 DLQSNATERLTNTLFIN---------ISAS--YSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +L++     + + L  +         +  +  ++PDS  I+F +    K +++ +     
Sbjct: 266 NLETQEEWPVYDNLSHDQQETWAIFGVYPNFAWTPDSKNIIFYA----KGKIWNLDVASL 321

Query: 337 DQKRISQD-------KEASYFDPVW---------------SPQGDLIAFTKFSGEKFAIG 374
           +   I  D        +A +F                   SP G ++AF   +   +   
Sbjct: 322 NVANIPFDVTSTQTISDALHFPQKVFQDEFTVKMIRQLTTSPDGKMVAF---NAAGYIYT 378

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINT 433
               +G  +R+         P +SP G+SL++    D   GS + +IDL       L   
Sbjct: 379 KALPNGVPQRITTGTDLEYEPEFSPDGKSLVYVSWADEMKGS-INTIDLTTHLIMRLTTD 437

Query: 434 PAYASDPQW 442
             Y   P++
Sbjct: 438 RGYYYSPKY 446


>gi|145593151|ref|YP_001157448.1| peptidase S9B dipeptidylpeptidase IV subunit [Salinispora tropica
           CNB-440]
 gi|145302488|gb|ABP53070.1| peptidase S9B, dipeptidylpeptidase IV domain protein [Salinispora
           tropica CNB-440]
          Length = 590

 Score =  130 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 88/245 (35%), Gaps = 8/245 (3%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +R L    +    +   +P+  +  +      +               ++       
Sbjct: 17  GFRLRRLAADPNG-SGDGAIAPDGTR--FVASSKRNGSVNLWFFDLSSGKWQQGTWGTGD 73

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            +  ++S +G++   +  +     I+   L      +LT+        S+SPD S + F 
Sbjct: 74  DIEAQWSPDGRQLTFTSSRGGHKAIWLYRLSDGQVRQLTSADHEEEYPSWSPDGSTVAFV 133

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               G+    V+ + G   + ++ +         W+P G  +    +     A+ ++   
Sbjct: 134 GGSWGRRHFLVVPATGGTPRPVTTN-PGRAGACSWAPDGRWLVCHSYDTGAGAVWLLDSQ 192

Query: 380 GSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYA 437
            ++   + + S+    PT  P+  ++ FSR  +G   S ++   L +G    L+ T A  
Sbjct: 193 TAEAIQVTDGSSWDYKPTICPTRPAVAFSRSNEGR--SVIWVQRLGDGTGGPLVVTGADD 250

Query: 438 SDPQW 442
             P W
Sbjct: 251 RWPTW 255



 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 96/260 (36%), Gaps = 14/260 (5%)

Query: 185 VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            S   ++ + V    DG     +    D     P ++ +   + +    DE    + + D
Sbjct: 222 RSNEGRSVIWVQRLGDGTGGPLVVTGAD--DRWPTWTRDGNHLFFHRLVDEGA-GIAVWD 278

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R       +        A  F+ +G+R +   +      +  ++L +  ++ L      
Sbjct: 279 RRTRVVRDLVPAEHKPRYA-SFAPDGRRIVYGTEAGGRSRLRILNLDTGTSQPLPAGEA- 336

Query: 304 NISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDK---EASYFDPVWSPQG 358
               ++SPD   I      D   + ++  +  +    +  +  +      +    ++P G
Sbjct: 337 -AFPTWSPDGRTIACTVRPDPSSRWEIATVDVSSGQVQLWTTGRTDLRGLHAPVSFAPDG 395

Query: 359 DLIAFTK-FSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGS 416
             + F       +  + V+  +  +   L EDS   +AP++SP GRS+IF   + GD   
Sbjct: 396 RRLVFRSETEPFEANLLVLDLNSGRFTNLTEDSWWDEAPSFSPDGRSVIFMSTRGGDWTW 455

Query: 417 KLYSIDLNGRNETLINTPAY 436
             Y IDL+ +    +  P Y
Sbjct: 456 GFYRIDLDSKEIVTVAGPDY 475



 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 94/260 (36%), Gaps = 15/260 (5%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + ++D   A    +T       ++P   P +  VA++  ++   +            P  
Sbjct: 186 VWLLDSQTAEAIQVTDGSS-WDYKPTICPTRPAVAFSRSNEGRSVIWVQRLGDGTGGPLV 244

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +         P ++ +G         DE   I   D ++     L         AS++PD
Sbjct: 245 VTGADDRW--PTWTRDGNHLFFHRLVDEGAGIAVWDRRTRVVRDLVPAEHKPRYASFAPD 302

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EK 370
             +IV+ ++  G+ +L ++  +    + +          P WSP G  IA T       +
Sbjct: 303 GRRIVYGTEAGGRSRLRILNLDTGTSQPL---PAGEAAFPTWSPDGRTIACTVRPDPSSR 359

Query: 371 FAIGVMKKDGSQERLLVEDSNL----QAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLN- 424
           + I  +     Q +L            AP +++P GR L+F R +     + L  +DLN 
Sbjct: 360 WEIATVDVSSGQVQLWTTGRTDLRGLHAPVSFAPDGRRLVF-RSETEPFEANLLVLDLNS 418

Query: 425 GRNETLINTPAYASDPQWVG 444
           GR   L     +   P +  
Sbjct: 419 GRFTNLTEDSWWDEAPSFSP 438



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 86/234 (36%), Gaps = 11/234 (4%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-YATYDDEDILRVYLM 242
                 ++ L +++ D    + L          P +SP+ + +A     D      +  +
Sbjct: 309 GTEAGGRSRLRILNLDTGTSQPLPAGE---AAFPTWSPDGRTIACTVRPDPSSRWEIATV 365

Query: 243 DTRIDRA---PKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLT 298
           D    +         + R +     F+ +G+R +  S  +    ++  +DL S     LT
Sbjct: 366 DVSSGQVQLWTTGRTDLRGLHAPVSFAPDGRRLVFRSETEPFEANLLVLDLNSGRFTNLT 425

Query: 299 NTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
              + + + S+SPD   ++F S R G      Y +  +  +   ++        +P  + 
Sbjct: 426 EDSWWDEAPSFSPDGRSVIFMSTRGGDWTWGFYRIDLDSKEIVTVAGPDYIERNNPQLTV 485

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            G  +  T  + +   +     DG+   +      ++ P  S  G  ++F+R +
Sbjct: 486 DGR-VLSTMVASKVEELYEQLPDGAGRVVTEAGPAVRYPVPSADGEQVVFTRTR 538



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 55/157 (35%), Gaps = 3/157 (1%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           ++     RL      +   + +PD ++ V  S R G   L+    +    ++ +      
Sbjct: 15  VKGFRLRRLAADPNGSGDGAIAPDGTRFVASSKRNGSVNLWFFDLSSGKWQQGTWGT-GD 73

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFS 407
             +  WSP G  + FT   G   AI + +    Q R L   D   + P+WSP G ++ F 
Sbjct: 74  DIEAQWSPDGRQLTFTSSRGGHKAIWLYRLSDGQVRQLTSADHEEEYPSWSPDGSTVAFV 133

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               G     L      G    +   P  A    W  
Sbjct: 134 GGSWGRRHF-LVVPATGGTPRPVTTNPGRAGACSWAP 169


>gi|262194655|ref|YP_003265864.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262078002|gb|ACY13971.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1598

 Score =  129 bits (325), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 58/286 (20%), Positives = 116/286 (40%), Gaps = 15/286 (5%)

Query: 147  SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIR 204
             P + ++  H +  +I   +  E GD      F      VVS     S+ V + DG+   
Sbjct: 945  PPGALQEAKHLLYSNIAPVVFTEHGDAVYSATFSPDGRRVVSASWDQSVRVWNADGSGQP 1004

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             +    +  +    FSP+ +++A A+ D      V + +      P  +      + + R
Sbjct: 1005 LVLRGHEDAVLSASFSPDGRRIASASKDK----SVRVWNADGSGQPLLLRGHEEAVRSVR 1060

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS +G+   IS   D  + +++ D          +   ++ SA +SPD  +IV  S+   
Sbjct: 1061 FSPDGRSI-ISASNDTTIRVWNADGSGRPLVLHGHEDAVH-SAHFSPDGRRIVSASN--- 1115

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             + + V  ++G+ +  + +  EA   +  +SP G  I    +      I      G  + 
Sbjct: 1116 DKSVRVWNADGAGEPLVLRGHEAGVMEANFSPDGSRIVSASYD-RSVRIWPADGSGEAQV 1174

Query: 385  LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            L   +  + A  +SP G  ++ +     D  ++++  D +G + TL
Sbjct: 1175 LRGHEGRVYAAGFSPDGAYVVSASS---DKSARVWRADGSGLHWTL 1217



 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 76/395 (19%), Positives = 140/395 (35%), Gaps = 49/395 (12%)

Query: 66   SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG------RVIKE 119
            S +VS    RS            Q +   +       ++  GA  +V+       RV + 
Sbjct: 1150 SRIVSASYDRSVRIWPADGSGEAQVLRGHEGRVYAAGFSPDGA-YVVSASSDKSARVWRA 1208

Query: 120  GKDRLRVEFRLWD--------VKDRKQIIGKKFFSSPASWRK-------IAHTISDDIYQ 164
                L    R  D          D + I+   + SS   WR              D +  
Sbjct: 1209 DGSGLHWTLRGHDDGVLSASFSADGEHIVTSSYDSSVRVWRARGSGQPLALRGHDDAVVA 1268

Query: 165  SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     G            +VS    NS+ V + DG+    +    D+ +    FSP+ +
Sbjct: 1269 ASFSPDGA----------RIVSASYDNSVRVWNADGSGEPVILRGHDKWVLWASFSPDGR 1318

Query: 225  KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +V  A+ D      V + +         +      +    FS +G R + S   D ++ +
Sbjct: 1319 RVISASLDK----SVRVWNADGSGEALVLRGHEDGVFTADFSPDGARIV-SASNDHSVRV 1373

Query: 285  YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
            ++ D  S     L   L    SA +SPD ++IV  S     + + V +++GS +  + + 
Sbjct: 1374 WNAD-GSGRPRVLRGHLARVHSAQFSPDGARIVSASV---DKSVRVWRADGSGEPVVLRG 1429

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGR 402
             E   +   +SP G  I           + V + DG+ E +++   +       +SP GR
Sbjct: 1430 HEDPVWSARFSPDGQRIVSAAMDKS---VRVWQADGTGEPVILRGHDDWVTWAEFSPDGR 1486

Query: 403  SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             ++ + K   D   +++  D  G+   L     + 
Sbjct: 1487 FIVSASK---DKTVRVWRADGTGQPLVLRGHEMWV 1518



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 46/230 (20%), Positives = 96/230 (41%), Gaps = 14/230 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              V+S  +  S+ V + DG+    +    +  +F   FSP+  ++  A+ D      V +
Sbjct: 1318 RRVISASLDKSVRVWNADGSGEALVLRGHEDGVFTADFSPDGARIVSASNDH----SVRV 1373

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +      P+ +    + + + +FS +G R + S   D+++ ++  D  S     L    
Sbjct: 1374 WNADGSGRPRVLRGHLARVHSAQFSPDGARIV-SASVDKSVRVWRAD-GSGEPVVLRGHE 1431

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                SA +SPD  +IV  +     + + V Q++G+ +  I +  +       +SP G  I
Sbjct: 1432 DPVWSARFSPDGQRIVSAAM---DKSVRVWQADGTGEPVILRGHDDWVTWAEFSPDGRFI 1488

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRK 409
                       + V + DG+ + L++    +      +SP G+ L+ +  
Sbjct: 1489 VSASKDKT---VRVWRADGTGQPLVLRGHEMWVNKVRFSPDGQRLVSASD 1535



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 55/344 (15%), Positives = 117/344 (34%), Gaps = 45/344 (13%)

Query: 85   DSFKQKITNPDSIPRFQDWNSLGA----------QVLVTGRVIKEGKDRLRVEF----RL 130
             +  + I         + W + G+            +V      +G   +   +    R+
Sbjct: 1230 SADGEHIVTSSYDSSVRVWRARGSGQPLALRGHDDAVVAASFSPDGARIVSASYDNSVRV 1289

Query: 131  WDV-KDRKQIIGKKF-------FSSPASWRKIAHTI--------SDDIYQSIT---GEKG 171
            W+     + +I +           SP   R I+ ++        +D   +++     E G
Sbjct: 1290 WNADGSGEPVILRGHDKWVLWASFSPDGRRVISASLDKSVRVWNADGSGEALVLRGHEDG 1349

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
             F +        +VS    +S+ V + DG+    +       +   +FSP+  ++  A+ 
Sbjct: 1350 VFTADFSPDGARIVSASNDHSVRVWNADGSGRPRVLRGHLARVHSAQFSPDGARIVSASV 1409

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D      V +        P  +      + + RFS +G+R + S   D+++ ++  D  +
Sbjct: 1410 DK----SVRVWRADGSGEPVVLRGHEDPVWSARFSPDGQRIV-SAAMDKSVRVWQAD-GT 1463

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                 L         A +SPD   IV  S     + + V +++G+ Q  + +  E     
Sbjct: 1464 GEPVILRGHDDWVTWAEFSPDGRFIVSASK---DKTVRVWRADGTGQPLVLRGHEMWVNK 1520

Query: 352  PVWSPQGDLIAFTKFSGEKFAIG--VMKKDGSQERLLVEDSNLQ 393
              +SP G  +  +    +   +   +        RL    S   
Sbjct: 1521 VRFSPDGQRLV-SASDDKTIRVWNDLSPVTLDDPRLWTRTSYCM 1563


>gi|54297561|ref|YP_123930.1| hypothetical protein lpp1611 [Legionella pneumophila str. Paris]
 gi|53751346|emb|CAH12762.1| hypothetical protein lpp1611 [Legionella pneumophila str. Paris]
          Length = 656

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 64/306 (20%), Positives = 113/306 (36%), Gaps = 58/306 (18%)

Query: 195 VMDRDGANIRYLTPSRD----QILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTR 245
           V+  DG   + L    D    Q + EP  SP+ + VAY               V+ +   
Sbjct: 13  VVFHDGWAGKRLPELNDLYRIQDISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVD 72

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFI 303
              + +      S    P++S NGK         K+    I+   +Q N   +LT+    
Sbjct: 73  SKSSQRITFAEDSSSSLPKWSPNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTHIDGE 132

Query: 304 NISASYSPDSSQIVFE---SDRE------------------------GKEQLYVMQSNGS 336
               ++SPDS++I F    SD                          G++ LY+++    
Sbjct: 133 VSDFTWSPDSNRIAFIAQKSDPSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSK 192

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKK-DGSQERLLVE- 388
              +++ D     + P WSP G  IAF    G+       + I +++   G++E  L   
Sbjct: 193 AITQLT-DGNHDEYLPAWSPDGKYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKEHQLTHF 251

Query: 389 DSNLQAP------TWSPSGRSLIFSRKKDGDTG----SKLYSIDLNGRNETLI-NTPAYA 437
             +   P      +WSP    + + R  +        ++L  ID+N ++E +I     + 
Sbjct: 252 PGSDMNPDYDSNLSWSPDSSKIAYLRSNEHQWTYYSPNQLAIIDINTKDEKIIAPRDNWY 311

Query: 438 SDPQWV 443
             P+W 
Sbjct: 312 YKPKWS 317



 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 114/326 (34%), Gaps = 50/326 (15%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           DI +      G + +  +    +    I    +  +  D  + + +T + D     P++S
Sbjct: 35  DISEPDLSPDGKWVAYTV-SQLNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPKWS 93

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD- 279
           PN + +AY +   ++      + +  D    ++ +    +    +S +  R     QK  
Sbjct: 94  PNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTHIDGEVSDFTWSPDSNRIAFIAQKSD 153

Query: 280 --------------------------EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                                         +Y V+L+S A  +LT+        ++SPD 
Sbjct: 154 PSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYLPAWSPDG 213

Query: 314 SQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDP------VWSPQGDLI 361
             I F +      DR     +Y+++     ++        S  +P       WSP    I
Sbjct: 214 KYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKEHQLTHFPGSDMNPDYDSNLSWSPDSSKI 273

Query: 362 AFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDT 414
           A+ + +  ++       + ++  +   E+++    N    P WS  G+ +      +   
Sbjct: 274 AYLRSNEHQWTYYSPNQLAIIDINTKDEKIIAPRDNWYYKPKWSQDGKFIY--ALIEESR 331

Query: 415 GSKLYSIDL-NGRNETLINTPAYASD 439
            + L  ID+ +G+ + L     Y  D
Sbjct: 332 NTYLNRIDIHSGQIKKLTGGLRYDMD 357



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 63/182 (34%), Gaps = 41/182 (22%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               SPD   + +        D     +++ +  +    +RI+  +++S   P WSP G 
Sbjct: 38  EPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPKWSPNGK 97

Query: 360 LIAFTKFSG--EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD----- 411
            +A+    G      I +     ++E  L   D  +   TWSP    + F  +K      
Sbjct: 98  WLAYLSDGGKEGTTQIWIASVQDNKEHQLTHIDGEVSDFTWSPDSNRIAFIAQKSDPSNE 157

Query: 412 --------------------GDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVG 444
                               G     LY ++L  +  T +         PA++ D +++ 
Sbjct: 158 EEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYLPAWSPDGKYIA 217

Query: 445 FM 446
           F+
Sbjct: 218 FV 219



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 32/68 (47%), Gaps = 12/68 (17%)

Query: 391 NLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLIN--------TPAYAS 438
           ++  P  SP G+ + ++  +    D  + ++++ + ++ ++   I          P ++ 
Sbjct: 35  DISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPKWSP 94

Query: 439 DPQWVGFM 446
           + +W+ ++
Sbjct: 95  NGKWLAYL 102


>gi|85375068|ref|YP_459130.1| hypothetical protein ELI_11205 [Erythrobacter litoralis HTCC2594]
 gi|84788151|gb|ABC64333.1| hypothetical protein ELI_11205 [Erythrobacter litoralis HTCC2594]
          Length = 1087

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 86/212 (40%), Gaps = 27/212 (12%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I       +    S +G+    S+  D    IY++ +      R+   L   +   +SPD
Sbjct: 69  IRTDEGTWMDVDVSPDGRTVAFSLLGD----IYTMPISGGTPTRIAEGLAWEVQPRFSPD 124

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFS 367
            S+I F SDR G + +++M+++GSD+K ++++       P WSP G  IA      T  S
Sbjct: 125 GSRIAFTSDRGGGDNIWLMRTDGSDKKALTKEDFRLMHQPTWSPDGQFIAAKKHYTTGRS 184

Query: 368 GEKFAIGVMKKDGSQERLL------VEDSNLQAPTWSPSGRSLIFSRKKDG--------D 413
                + +    G     L           L  P ++P G  + F+R            D
Sbjct: 185 LGTGEVWLYHVSGGGGVKLVERPSETHQKELGEPIYAPDGSGIYFTRNDTSGPIFEYAQD 244

Query: 414 TGSKLYSI---DL-NGRNETLINTPAYASDPQ 441
           + + ++ I   DL +G   T+++    A  P 
Sbjct: 245 SNAGIFRIEKYDLESGERTTVVDGFGGAVRPT 276



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 64/362 (17%), Positives = 112/362 (30%), Gaps = 97/362 (26%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YAT 230
           SRI F S+          + +M  DG++ + LT    +++ +P +SP+ Q +A    Y T
Sbjct: 126 SRIAFTSDRGGGDN----IWLMRTDGSDKKALTKEDFRLMHQPTWSPDGQFIAAKKHYTT 181

Query: 231 YDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISVQKD------- 279
                   V+L         K +       +  +  P ++ +G     +           
Sbjct: 182 GRSLGTGEVWLYHVSGGGGVKLVERPSETHQKELGEPIYAPDGSGIYFTRNDTSGPIFEY 241

Query: 280 ------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                     I   DL+S     + +     +  + SPD S I F    +   QL++ + 
Sbjct: 242 AQDSNAGIFRIEKYDLESGERTTVVDGFGGAVRPTPSPDGSAIAFVRRDKDNSQLWIKEF 301

Query: 334 NGSDQKRI----------SQDKEASYFDPVWSPQGDLIAF--------TKFSGEKF---- 371
              +++ +          +      Y +  W+     I F            G  F    
Sbjct: 302 ASGEERMLYADLDRDVQETWAVTGVYPNMDWTSDSRSIVFWSGGKLNRINRDGSGFTQIP 361

Query: 372 -----------------------------------------------AIGVMKKDGSQER 384
                                                           + V    G Q R
Sbjct: 362 FSVNDTRGIADAPHPIIPVASDTFTTNIPKFATVSPDGRRVVFETLGKLYVKNVGGGQPR 421

Query: 385 LLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQW 442
            L   S ++A P +S  GRSL F R  D   G ++   D NG N  T+   P + + P++
Sbjct: 422 RLTSGSAIEAWPAFSRDGRSLAFVRWTDDGLG-EIVVGDANGGNLRTVTRQPGHYASPRF 480

Query: 443 VG 444
             
Sbjct: 481 SP 482



 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 87/240 (36%), Gaps = 41/240 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--------------- 263
           ++ + + + +  +    + R+    +   + P  + + R +  AP               
Sbjct: 332 WTSDSRSIVF--WSGGKLNRINRDGSGFTQIPFSVNDTRGIADAPHPIIPVASDTFTTNI 389

Query: 264 ----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                 S +G+R +          +Y  ++      RLT+   I    ++S D   + F 
Sbjct: 390 PKFATVSPDGRRVVFET----LGKLYVKNVGGGQPRRLTSGSAIEAWPAFSRDGRSLAFV 445

Query: 320 S-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------- 369
               +G  ++ V  +NG + + +++ +   Y  P +SP G  I F K SG          
Sbjct: 446 RWTDDGLGEIVVGDANGGNLRTVTR-QPGHYASPRFSPDGRTIVFEKRSGGFLTAPEYSA 504

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              I  +   G   +L+  +    AP +      +      +G  G+ L S DL+G  + 
Sbjct: 505 DPGIYRVSTSGGTPQLISRNGA--APQFGADNDRVF---MVEGGEGASLVSTDLSGEAKR 559



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 33/257 (12%)

Query: 200 GANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           GA IR +    D+  +     SP+ + VA++   D     +Y M       P RI    +
Sbjct: 61  GATIRQVPIRTDEGTWMDVDVSPDGRTVAFSLLGD-----IYTMPI-SGGTPTRIAEGLA 114

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV 317
             + PRFS +G R   +  +    +I+ +    +  + LT   F +    ++SPD   I 
Sbjct: 115 WEVQPRFSPDGSRIAFTSDRGGGDNIWLMRTDGSDKKALTKEDFRLMHQPTWSPDGQFIA 174

Query: 318 ----FESDRE-GKEQLYVMQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKF-- 366
               + + R  G  ++++   +G       +R S+  +    +P+++P G  I FT+   
Sbjct: 175 AKKHYTTGRSLGTGEVWLYHVSGGGGVKLVERPSETHQKELGEPIYAPDGSGIYFTRNDT 234

Query: 367 -----------SGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDT 414
                      +   F I     +  +   +V+       PT SP G ++ F R+     
Sbjct: 235 SGPIFEYAQDSNAGIFRIEKYDLESGERTTVVDGFGGAVRPTPSPDGSAIAFVRRD--KD 292

Query: 415 GSKLYSIDLNGRNETLI 431
            S+L+  +     E ++
Sbjct: 293 NSQLWIKEFASGEERML 309



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 49/302 (16%), Positives = 96/302 (31%), Gaps = 44/302 (14%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           I  ++G +    +      V+  +   +  M   G     +         +PRFSP+  +
Sbjct: 69  IRTDEGTWMDVDVSPDGRTVAFSLLGDIYTMPISGGTPTRIAEGL-AWEVQPRFSPDGSR 127

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQKDE 280
           +A+ + D      ++LM T              ++  P +S +G+         + +   
Sbjct: 128 IAFTS-DRGGGDNIWLMRTDGSDKKALTKEDFRLMHQPTWSPDGQFIAAKKHYTTGRSLG 186

Query: 281 AMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFESD-------------R 322
             +++   +      +L                Y+PD S I F  +              
Sbjct: 187 TGEVWLYHVSGGGGVKLVERPSETHQKELGEPIYAPDGSGIYFTRNDTSGPIFEYAQDSN 246

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G  ++        ++  +  D       P  SP G  IAF +   +   + + +    +
Sbjct: 247 AGIFRIEKYDLESGERTTVV-DGFGGAVRPTPSPDGSAIAFVRRDKDNSQLWIKEFASGE 305

Query: 383 ERLLVED------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           ER+L  D                   W+   RS++F        G KL  I+ +G   T 
Sbjct: 306 ERMLYADLDRDVQETWAVTGVYPNMDWTSDSRSIVFWS------GGKLNRINRDGSGFTQ 359

Query: 431 IN 432
           I 
Sbjct: 360 IP 361



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 82/227 (36%), Gaps = 24/227 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRF---SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            D  +      S       P+F   SP+ ++V + T       ++Y+ +      P+R+ 
Sbjct: 371 ADAPHPIIPVASDTFTTNIPKFATVSPDGRRVVFETLG-----KLYVKNVG-GGQPRRLT 424

Query: 255 NFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           +  ++   P FS +G+         D   +I   D        +T       S  +SPD 
Sbjct: 425 SGSAIEAWPAFSRDGRSLAFVRWTDDGLGEIVVGDANGGNLRTVTRQPGHYASPRFSPDG 484

Query: 314 SQIVFESDREG---------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             IVFE    G            +Y + ++G   + IS++  A    P +    D +   
Sbjct: 485 RTIVFEKRSGGFLTAPEYSADPGIYRVSTSGGTPQLISRNGAA----PQFGADNDRVFMV 540

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +  GE  ++      G  +R   +         SP+GR + F +  +
Sbjct: 541 E-GGEGASLVSTDLSGEAKRTHAKGELANDFQVSPNGRLVAFRQNYE 586



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 27/72 (37%), Gaps = 13/72 (18%)

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------T 433
            Q  +  ++        SP GR++ FS          +Y++ ++G   T I         
Sbjct: 65  RQVPIRTDEGTWMDVDVSPDGRTVAFS------LLGDIYTMPISGGTPTRIAEGLAWEVQ 118

Query: 434 PAYASDPQWVGF 445
           P ++ D   + F
Sbjct: 119 PRFSPDGSRIAF 130


>gi|296107220|ref|YP_003618920.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidase [Legionella
           pneumophila 2300/99 Alcoy]
 gi|295649121|gb|ADG24968.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidase [Legionella
           pneumophila 2300/99 Alcoy]
          Length = 656

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 64/306 (20%), Positives = 113/306 (36%), Gaps = 58/306 (18%)

Query: 195 VMDRDGANIRYLTPSRD----QILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTR 245
           V+  DG   + L    D    Q + EP  SP+ + VAY               V+ +   
Sbjct: 13  VVFHDGWAGKRLPELNDLYRIQDISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVD 72

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFI 303
              + +      S    P++S NGK         K+    I+   +Q N   +LT+    
Sbjct: 73  SKSSQRITFAEDSSSSLPKWSPNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTHIDGE 132

Query: 304 NISASYSPDSSQIVFE---SDRE------------------------GKEQLYVMQSNGS 336
               ++SPDS++I F    SD                          G++ LY+++    
Sbjct: 133 VSDFTWSPDSNRIAFIAQKSDPSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSK 192

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKK-DGSQERLLVE- 388
              +++ D     + P WSP G  IAF    G+       + I +++   G++E  L   
Sbjct: 193 AITQLT-DGNHDEYLPAWSPDGKYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKEHQLTHF 251

Query: 389 DSNLQAP------TWSPSGRSLIFSRKKDGDTG----SKLYSIDLNGRNETLI-NTPAYA 437
             +   P      +WSP    + + R  +        ++L  ID+N ++E +I     + 
Sbjct: 252 PGSDMNPDYDSNLSWSPDSSKIAYLRSNEHQWTYYSPNQLAIIDINTKDEKIIAPRDNWY 311

Query: 438 SDPQWV 443
             P+W 
Sbjct: 312 YKPKWS 317



 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 114/326 (34%), Gaps = 50/326 (15%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           DI +      G + +  +    +    I    +  +  D  + + +T + D     P++S
Sbjct: 35  DISEPDLSPDGKWVAYTV-SQLNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPKWS 93

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD- 279
           PN + +AY +   ++      + +  D    ++ +    +    +S +  R     QK  
Sbjct: 94  PNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTHIDGEVSDFTWSPDSNRIAFIAQKSD 153

Query: 280 --------------------------EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                                         +Y V+L+S A  +LT+        ++SPD 
Sbjct: 154 PSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYLPAWSPDG 213

Query: 314 SQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDP------VWSPQGDLI 361
             I F +      DR     +Y+++     ++        S  +P       WSP    I
Sbjct: 214 KYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKEHQLTHFPGSDMNPDYDSNLSWSPDSSKI 273

Query: 362 AFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDT 414
           A+ + +  ++       + ++  +   E+++    N    P WS  G+ +      +   
Sbjct: 274 AYLRSNEHQWTYYSPNQLAIIDINTKDEKIIAPRDNWYYKPKWSQDGKFIY--ALIEESR 331

Query: 415 GSKLYSIDL-NGRNETLINTPAYASD 439
            + L  ID+ +G+ + L     Y  D
Sbjct: 332 NTYLNRIDIHSGQIKKLTGGLRYDMD 357



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 63/182 (34%), Gaps = 41/182 (22%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               SPD   + +        D     +++ +  +    +RI+  +++S   P WSP G 
Sbjct: 38  EPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPKWSPNGK 97

Query: 360 LIAFTKFSG--EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD----- 411
            +A+    G      I +     ++E  L   D  +   TWSP    + F  +K      
Sbjct: 98  WLAYLSDGGKEGTTQIWIASVQDNKEHQLTHIDGEVSDFTWSPDSNRIAFIAQKSDPSNE 157

Query: 412 --------------------GDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVG 444
                               G     LY ++L  +  T +         PA++ D +++ 
Sbjct: 158 EEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYLPAWSPDGKYIA 217

Query: 445 FM 446
           F+
Sbjct: 218 FV 219



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 32/68 (47%), Gaps = 12/68 (17%)

Query: 391 NLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLIN--------TPAYAS 438
           ++  P  SP G+ + ++  +    D  + ++++ + ++ ++   I          P ++ 
Sbjct: 35  DISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPKWSP 94

Query: 439 DPQWVGFM 446
           + +W+ ++
Sbjct: 95  NGKWLAYL 102


>gi|148359176|ref|YP_001250383.1| acylaminoacyl peptidase [Legionella pneumophila str. Corby]
 gi|148280949|gb|ABQ55037.1| acylaminoacyl peptidase [Legionella pneumophila str. Corby]
          Length = 656

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 64/306 (20%), Positives = 113/306 (36%), Gaps = 58/306 (18%)

Query: 195 VMDRDGANIRYLTPSRD----QILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTR 245
           V+  DG   + L    D    Q + EP  SP+ + VAY               V+ +   
Sbjct: 13  VVFHDGWAGKRLPELNDLYRIQDISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVD 72

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFI 303
              + +      S    P++S NGK         K+    I+   +Q N   +LT+    
Sbjct: 73  SKSSQRITFAEDSSSSLPKWSPNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTHIDGE 132

Query: 304 NISASYSPDSSQIVFE---SDRE------------------------GKEQLYVMQSNGS 336
               ++SPDS++I F    SD                          G++ LY+++    
Sbjct: 133 VSDFTWSPDSNRIAFIAQKSDPSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSK 192

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKK-DGSQERLLVE- 388
              +++ D     + P WSP G  IAF    G+       + I +++   G++E  L   
Sbjct: 193 AITQLT-DGNHDEYLPAWSPDGKYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKEHQLTHF 251

Query: 389 DSNLQAP------TWSPSGRSLIFSRKKDGDTG----SKLYSIDLNGRNETLI-NTPAYA 437
             +   P      +WSP    + + R  +        ++L  ID+N ++E +I     + 
Sbjct: 252 PGSDMNPDYDSNLSWSPDSSKIAYLRSNEHQWTYYSPNQLAIIDINTKDEKIIAPRDNWY 311

Query: 438 SDPQWV 443
             P+W 
Sbjct: 312 YKPKWS 317



 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 114/326 (34%), Gaps = 50/326 (15%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           DI +      G + +  +    +    I    +  +  D  + + +T + D     P++S
Sbjct: 35  DISEPDLSPDGKWVAYTV-SQLNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPKWS 93

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD- 279
           PN + +AY +   ++      + +  D    ++ +    +    +S +  R     QK  
Sbjct: 94  PNGKWLAYLSDGGKEGTTQIWIASVQDNKEHQLTHIDGEVSDFTWSPDSNRIAFIAQKSD 153

Query: 280 --------------------------EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                                         +Y V+L+S A  +LT+        ++SPD 
Sbjct: 154 PSNEEEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYLPAWSPDG 213

Query: 314 SQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDP------VWSPQGDLI 361
             I F +      DR     +Y+++     ++        S  +P       WSP    I
Sbjct: 214 KYIAFVTKRGKDPDRHFNYDIYLIEPKSGAKEHQLTHFPGSDMNPDYDSNLSWSPDSSKI 273

Query: 362 AFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDT 414
           A+ + +  ++       + ++  +   E+++    N    P WS  G+ +      +   
Sbjct: 274 AYLRSNEHQWTYYSPNQLAIIDINTKDEKIIAPRDNWYYKPKWSQDGKFIY--ALIEESR 331

Query: 415 GSKLYSIDL-NGRNETLINTPAYASD 439
            + L  ID+ +G+ + L     Y  D
Sbjct: 332 NTYLNRIDIHSGQIKKLTGGLRYDMD 357



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 63/182 (34%), Gaps = 41/182 (22%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               SPD   + +        D     +++ +  +    +RI+  +++S   P WSP G 
Sbjct: 38  EPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPKWSPNGK 97

Query: 360 LIAFTKFSG--EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD----- 411
            +A+    G      I +     ++E  L   D  +   TWSP    + F  +K      
Sbjct: 98  WLAYLSDGGKEGTTQIWIASVQDNKEHQLTHIDGEVSDFTWSPDSNRIAFIAQKSDPSNE 157

Query: 412 --------------------GDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVG 444
                               G     LY ++L  +  T +         PA++ D +++ 
Sbjct: 158 EEQPIVVDRYQFKVDGVGYLGKGRDHLYLVELKSKAITQLTDGNHDEYLPAWSPDGKYIA 217

Query: 445 FM 446
           F+
Sbjct: 218 FV 219



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 8/68 (11%), Positives = 32/68 (47%), Gaps = 12/68 (17%)

Query: 391 NLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLIN--------TPAYAS 438
           ++  P  SP G+ + ++  +    D  + ++++ + ++ ++   I          P ++ 
Sbjct: 35  DISEPDLSPDGKWVAYTVSQLNAKDNISTTEVWKVSVDSKSSQRITFAEDSSSSLPKWSP 94

Query: 439 DPQWVGFM 446
           + +W+ ++
Sbjct: 95  NGKWLAYL 102


>gi|114570230|ref|YP_756910.1| amidohydrolase [Maricaulis maris MCS10]
 gi|114340692|gb|ABI65972.1| amidohydrolase [Maricaulis maris MCS10]
          Length = 1062

 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 48/208 (23%), Positives = 81/208 (38%), Gaps = 27/208 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               ++   S +G+        D   DIY++ +   A   +++ L   I   +SPD SQI
Sbjct: 48  EGTWMSLDVSPDGQTIAF----DMLGDIYTMPVSGGAATNVSSGLPWEIQPRFSPDGSQI 103

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKF 371
            F SDR G + +++M  +G + ++++++      +  W P G  IA      T  S    
Sbjct: 104 AFTSDRAGGDNIWIMDVDGGNVRQLTEESFRLLNNAAWHPSGRYIAARKHFTTTRSAGTG 163

Query: 372 AIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLIFSRK--------KDGDTGSK 417
            I      G     LVE  N         P +SP GR L ++             D+ + 
Sbjct: 164 EIWFYHVLGGGGVQLVERPNENFQKELGEPVFSPDGRYLYYTMNVTSGNSFIYAQDSNTN 223

Query: 418 LYSIDL----NGRNETLINTPAYASDPQ 441
           L+ I       G  +T ++    A  P 
Sbjct: 224 LFDIRRYDMETGETDTAVSGAGGAVRPA 251



 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 55/276 (19%), Positives = 99/276 (35%), Gaps = 38/276 (13%)

Query: 198 RDGANIRYLTPSRDQILFEPRF-----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            D AN    T + D  + E  +     SP+ Q +A+    D     +Y M      A   
Sbjct: 30  WDVANPPLETRAIDINVTEGTWMSLDVSPDGQTIAFDMLGD-----IYTMPV-SGGAATN 83

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSP 311
           + +     + PRFS +G +   +  +    +I+ +D+      +LT   F +  +A++ P
Sbjct: 84  VSSGLPWEIQPRFSPDGSQIAFTSDRAGGDNIWIMDVDGGNVRQLTEESFRLLNNAAWHP 143

Query: 312 DSSQIV----FESDRE-GKEQLYVMQSNGSDQKRISQDKEASY----FDPVWSPQGDLIA 362
               I     F + R  G  +++     G    ++ +    ++     +PV+SP G  + 
Sbjct: 144 SGRYIAARKHFTTTRSAGTGEIWFYHVLGGGGVQLVERPNENFQKELGEPVFSPDGRYLY 203

Query: 363 FTKF-------------SGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSR 408
           +T               +   F I     +  +    V        P  SP GR + F R
Sbjct: 204 YTMNVTSGNSFIYAQDSNTNLFDIRRYDMETGETDTAVSGAGGAVRPAPSPDGRYMAFIR 263

Query: 409 KKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQWV 443
           +      S L+  DL+ G    L+ T        W 
Sbjct: 264 RD--RIRSGLWIKDLDTGEERRLVETVDQDMQETWG 297



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 81/211 (38%), Gaps = 26/211 (12%)

Query: 216 EPRF---SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGK 270
            PRF   SP+  ++ Y T           +       P+R+         + P +S++G+
Sbjct: 364 MPRFATASPDGSQIVYETLGQ------LWVRAADGGEPRRLTRDDGTRREMMPTWSADGR 417

Query: 271 RALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG----- 324
               +   D+A+  I ++ ++      LT+      +  +SPD   +VFE    G     
Sbjct: 418 TIAFATWDDDALGSIRTISVRGGRERVLTSQPGHYRNPRFSPDGETVVFEKGSGGYLTAP 477

Query: 325 ----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E +Y + ++G D  R++        DP +    D I F    G    +  +  +G
Sbjct: 478 EWSENEGVYRVAADGGDMVRVTDSG----SDPHFGASNDRI-FVTRGGGGARLVSIDLNG 532

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +QER  V    +     SP G  + F +  D
Sbjct: 533 NQERTHVTGDLVTGYQVSPDGSHVAFRQNYD 563



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 60/364 (16%), Positives = 117/364 (32%), Gaps = 99/364 (27%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YAT 230
           S+I F S+          + +MD DG N+R LT    ++L    + P+ + +A    + T
Sbjct: 101 SQIAFTSDRAGGDN----IWIMDVDGGNVRQLTEESFRLLNNAAWHPSGRYIAARKHFTT 156

Query: 231 YDDEDILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRALISV---------- 276
                   ++          + +     NF+  +  P FS +G+    ++          
Sbjct: 157 TRSAGTGEIWFYHVLGGGGVQLVERPNENFQKELGEPVFSPDGRYLYYTMNVTSGNSFIY 216

Query: 277 ---QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                    DI   D+++  T+   +     +  + SPD   + F      +  L++   
Sbjct: 217 AQDSNTNLFDIRRYDMETGETDTAVSGAGGAVRPAPSPDGRYMAFIRRDRIRSGLWIKDL 276

Query: 334 NGSDQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEK------------- 370
           +  +++R+          +      Y +  W P    + +    G +             
Sbjct: 277 DTGEERRLVETVDQDMQETWGVTGMYPNMDWMPDSGSLVYWADGGIQRVDIETGAVTNIP 336

Query: 371 FAI----------------------------GVMKKDGSQ------------------ER 384
           F+I                                 DGSQ                   R
Sbjct: 337 FSITDTRDVIDPPRPSVEVAPDTFQTRMPRFATASPDGSQIVYETLGQLWVRAADGGEPR 396

Query: 385 LLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDP 440
            L  D        PTWS  GR++ F+   D   GS + +I + G  E ++ + P +  +P
Sbjct: 397 RLTRDDGTRREMMPTWSADGRTIAFATWDDDALGS-IRTISVRGGRERVLTSQPGHYRNP 455

Query: 441 QWVG 444
           ++  
Sbjct: 456 RFSP 459



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 99/286 (34%), Gaps = 53/286 (18%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQIL--------FEPR--FSPNQQKVAYATYDDE 234
               I++ L + D D    R L  + DQ +          P   + P+   + Y  + D 
Sbjct: 263 RRDRIRSGLWIKDLDTGEERRLVETVDQDMQETWGVTGMYPNMDWMPDSGSLVY--WADG 320

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSM----------------ILAPRF---SSNGKRALIS 275
            I RV +    +   P  I + R +                   PRF   S +G + +  
Sbjct: 321 GIQRVDIETGAVTNIPFSITDTRDVIDPPRPSVEVAPDTFQTRMPRFATASPDGSQIVYE 380

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFI--NISASYSPDSSQIVF-ESDREGKEQLYVMQ 332
                   ++          RLT        +  ++S D   I F   D +    +  + 
Sbjct: 381 T----LGQLWVRAADGGEPRRLTRDDGTRREMMPTWSADGRTIAFATWDDDALGSIRTIS 436

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---------KFAIGVMKKDGSQE 383
             G  ++ ++  +   Y +P +SP G+ + F K SG             +  +  DG   
Sbjct: 437 VRGGRERVLTS-QPGHYRNPRFSPDGETVVFEKGSGGYLTAPEWSENEGVYRVAADGGDM 495

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             + +  +   P +  S   +  +R   G  G++L SIDLNG  E 
Sbjct: 496 VRVTDSGSD--PHFGASNDRIFVTR---GGGGARLVSIDLNGNQER 536



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 58/323 (17%), Positives = 113/323 (34%), Gaps = 63/323 (19%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRY---------LTPSRDQILFEPRFSPNQQ 224
           + R L+ + +V SG         + +  +IR             S       P  SP+ +
Sbjct: 198 DGRYLYYTMNVTSGNSFIYAQDSNTNLFDIRRYDMETGETDTAVSGAGGAVRPAPSPDGR 257

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR----------SMILAPRFSSNGKRALI 274
            +A+   D      +++ D       + +               M     +  +    + 
Sbjct: 258 YMAFIRRD-RIRSGLWIKDLDTGEERRLVETVDQDMQETWGVTGMYPNMDWMPDSGSLVY 316

Query: 275 SVQKDEAMDIYSVDLQSNATERL----TNTL------------FINIS----ASY---SP 311
                    I  VD+++ A   +    T+T               +        +   SP
Sbjct: 317 WADGG----IQRVDIETGAVTNIPFSITDTRDVIDPPRPSVEVAPDTFQTRMPRFATASP 372

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEK 370
           D SQIV+E+      QL+V  ++G + +R+++D        P WS  G  IAF  +  + 
Sbjct: 373 DGSQIVYET----LGQLWVRAADGGEPRRLTRDDGTRREMMPTWSADGRTIAFATWDDDA 428

Query: 371 F-AIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG-------DTGSKLYSI 421
             +I  +   G +ER+L     + + P +SP G +++F +   G            +Y +
Sbjct: 429 LGSIRTISVRGGRERVLTSQPGHYRNPRFSPDGETVVFEKGSGGYLTAPEWSENEGVYRV 488

Query: 422 DLNGRNETLINTPAYASDPQWVG 444
             +G +   +      SDP +  
Sbjct: 489 AADGGDMVRVTDSG--SDPHFGA 509


>gi|118589526|ref|ZP_01546931.1| hypothetical protein SIAM614_03780 [Stappia aggregata IAM 12614]
 gi|118437612|gb|EAV44248.1| hypothetical protein SIAM614_03780 [Stappia aggregata IAM 12614]
          Length = 276

 Score =  129 bits (324), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 83/206 (40%), Gaps = 18/206 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK- 278
           SP+   +  +   +     +Y +       P+RI +         +S +G+      ++ 
Sbjct: 73  SPDGSMLVVSDATEAGESCIYTLPV-TGGEPRRITSRTPSYWH-GWSPDGETLAYVGKRP 130

Query: 279 --DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                  ++S+ L      ++T          Y+PD   I F  +R G  QL+ ++ +GS
Sbjct: 131 ETGGTFQVFSIGLDGGEERQITREFDHCDGPDYTPDGKWIWFNGERAGSVQLWRVRPDGS 190

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------KFAIGVMKKDGSQERLLVE 388
             +++++D+  ++F P  SP G  +A+  +              + +M  +G   R+L+ 
Sbjct: 191 CLQQMTKDERVNWF-PHPSPDGKSVAYLAYEAGTTGHPAERTVELRLMPAEGGSPRILLS 249

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKK 410
                  L  P+W+P  R   + R +
Sbjct: 250 LFGGQGTLNVPSWAPDSRRFAYMRYE 275



 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 96/255 (37%), Gaps = 21/255 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    ++ L  P ++P+    A        + RV L D  +           +      
Sbjct: 16  TVLYETERHLEAPNWTPDG--AALIVNGGGRLYRVALDDPGLLEIDTGFATALNNDHG-- 71

Query: 265 FSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR- 322
            S +G   ++S   +     IY++ +      R+T +   +    +SPD   + +   R 
Sbjct: 72  LSPDGSMLVVSDATEAGESCIYTLPVTGGEPRRIT-SRTPSYWHGWSPDGETLAYVGKRP 130

Query: 323 --EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              G  Q++ +  +G ++++I+++ +     P ++P G  I F         +  ++ DG
Sbjct: 131 ETGGTFQVFSIGLDGGEERQITREFDHCD-GPDYTPDGKWIWFNGERAGSVQLWRVRPDG 189

Query: 381 SQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGS------KLYSIDLNGRNETLI-- 431
           S  + + +D      P  SP G+S+ +   + G TG       +L  +   G +  ++  
Sbjct: 190 SCLQQMTKDERVNWFPHPSPDGKSVAYLAYEAGTTGHPAERTVELRLMPAEGGSPRILLS 249

Query: 432 --NTPAYASDPQWVG 444
                   + P W  
Sbjct: 250 LFGGQGTLNVPSWAP 264



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 77/205 (37%), Gaps = 15/205 (7%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +  +L VS++  +G     +  +   G   R +T       +   +SP+ + +AY     
Sbjct: 75  DGSMLVVSDATEAGESC--IYTLPVTGGEPRRITSRTPS--YWHGWSPDGETLAYVGKRP 130

Query: 234 EDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           E      +    +D   +R I         P ++ +GK    + ++  ++ ++ V    +
Sbjct: 131 ETGGTFQVFSIGLDGGEERQITREFDHCDGPDYTPDGKWIWFNGERAGSVQLWRVRPDGS 190

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKE--------QLYVMQSNGSDQKRI--S 342
             +++T    +N     SPD   + + +   G          +L +M + G   + +   
Sbjct: 191 CLQQMTKDERVNWFPHPSPDGKSVAYLAYEAGTTGHPAERTVELRLMPAEGGSPRILLSL 250

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFS 367
              + +   P W+P     A+ ++ 
Sbjct: 251 FGGQGTLNVPSWAPDSRRFAYMRYE 275



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 69/172 (40%), Gaps = 14/172 (8%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           + ++D+++     L  T     + +++PD + ++      G  +LY +  +      I  
Sbjct: 5   LATIDVETGTETVLYETERHLEAPNWTPDGAALI----VNGGGRLYRVALDDPGLLEIDT 60

Query: 344 DKEASYFDPV-WSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
               +  +    SP G ++  +      +  I  +   G + R +   +      WSP G
Sbjct: 61  GFATALNNDHGLSPDGSMLVVSDATEAGESCIYTLPVTGGEPRRITSRTPSYWHGWSPDG 120

Query: 402 RSLIFSRKKDGDTGS-KLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
            +L +  K+    G+ +++SI L+G  E  I         P Y  D +W+ F
Sbjct: 121 ETLAYVGKRPETGGTFQVFSIGLDGGEERQITREFDHCDGPDYTPDGKWIWF 172


>gi|319647634|ref|ZP_08001852.1| YuxL protein [Bacillus sp. BT1B_CT2]
 gi|317389975|gb|EFV70784.1| YuxL protein [Bacillus sp. BT1B_CT2]
          Length = 653

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 95/265 (35%), Gaps = 47/265 (17%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNG 269
           + +P++SP+  K+AY      +    Y     I    K+        +     PR+S +G
Sbjct: 16  ITDPQYSPDGAKIAYVQTKVNEKQDSYDSHIMIYDREKQASVQWTFGKGRNQHPRWSPDG 75

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------------ 317
           K    +  ++E   IY +        ++T+  +      +SPD   ++            
Sbjct: 76  KNLAFTSNREETAQIYVISAAGGEARKVTDIPYDVSQPEWSPDGKTLLCSVKLTKEESVD 135

Query: 318 -------------------FESD-----REGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                              +++D     R    QL ++Q    + K+++ D E  +F   
Sbjct: 136 DEKKTEIEDHEPLEVDSLSYKADGQGFKRGKYTQLVLVQVETGEMKQLT-DLERDHFSHA 194

Query: 354 WSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKK 410
           +SP GD IAF     +     + +M       + L  ++    + ++SP G+ L F   +
Sbjct: 195 FSPCGDQIAFCANQTDMRVNDVYLMNLSTGDLKRLTGQNGIFSSLSFSPDGKHLAFIGNE 254

Query: 411 DGDTGSKL---YSIDLNGRNETLIN 432
                + L   +  D+     T + 
Sbjct: 255 KEYQNATLDKAWLYDIETGKLTCLT 279



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 78/265 (29%), Gaps = 58/265 (21%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------------------------ 227
            + V+   G   R +T      + +P +SP+ + +                         
Sbjct: 89  QIYVISAAGGEARKVTD-IPYDVSQPEWSPDGKTLLCSVKLTKEESVDDEKKTEIEDHEP 147

Query: 228 -----------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
                         +      ++ L+        K++ +      +  FS  G +     
Sbjct: 148 LEVDSLSYKADGQGFKRGKYTQLVLVQVETGEM-KQLTDLERDHFSHAFSPCGDQIAFCA 206

Query: 277 QKDEAM--DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-----LY 329
            + +    D+Y ++L +   +RLT    I  S S+SPD   + F  + +  +       +
Sbjct: 207 NQTDMRVNDVYLMNLSTGDLKRLTGQNGIFSSLSFSPDGKHLAFIGNEKEYQNATLDKAW 266

Query: 330 VMQSNGSDQKRISQDKEASYFD--------------PVWSPQGDLIAFTKFSGEKFAIGV 375
           +          +++  +    D              P W+  G+             I  
Sbjct: 267 LYDIETGKLTCLTEMLDVHLSDAVAGDSLVGGVLPKPAWTKDGNGFYVIGSDQGSTGIYY 326

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPS 400
           +  +G    + +E  ++   +  P 
Sbjct: 327 ISIEGLAYPVRLEKEHVNGFSLHPD 351



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 10/105 (9%)

Query: 348 SYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPS 400
           S  DP +SP G  IA+       K       I +  ++              Q P WSP 
Sbjct: 15  SITDPQYSPDGAKIAYVQTKVNEKQDSYDSHIMIYDREKQASVQWTFGKGRNQHPRWSPD 74

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
           G++L F+  +  +  +++Y I   G     + + P   S P+W  
Sbjct: 75  GKNLAFTSNR--EETAQIYVISAAGGEARKVTDIPYDVSQPEWSP 117


>gi|295401287|ref|ZP_06811259.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|294976694|gb|EFG52300.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus thermoglucosidasius C56-YS93]
          Length = 675

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 89/238 (37%), Gaps = 55/238 (23%)

Query: 260 ILAPRFSSNGKRALIS-----VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +  P+FS +GK+ +        +++    ++ + L   + ++ T     +    +SPD  
Sbjct: 30  VSDPQFSPDGKKVIFVQKTIDHEREYRSHLFLLSLADGSVKQWTFGKSKDTFPRWSPDGK 89

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTK-------- 365
            I F S+R GK Q++ + ++G + ++++  K        WSP G  LIA T         
Sbjct: 90  TIAFLSNRSGKPQIWRLPADGGEARQLTFLKNG-VRQLCWSPNGRFLIALTSLGKEETLK 148

Query: 366 --------------------------------FSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                                              ++  +  +  +  + + L    + +
Sbjct: 149 EHEEKNKNEKEKRKLTPLIVERLQYKSDAAGFRDDKQDVLIRIDAETGEMQALTN-GDDE 207

Query: 394 APTW--SPSGRSLIFSRKKDGD----TGSKLYSIDLN-GRNETLINTPAYASDPQWVG 444
             ++  SP G+++ F+  +  D        ++ +D++ G+   + +   + +   W  
Sbjct: 208 IISFAISPDGQTVAFAANRSEDPDFTFTRDIFLLDIDSGKTTKITDGNGFFASLSWSP 265



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/355 (15%), Positives = 109/355 (30%), Gaps = 80/355 (22%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
           + K      A      H +SD    S  G+K  F  + +       S +   SL     D
Sbjct: 12  MKKTTRGIAAEDLFRIHFVSDP-QFSPDGKKVIFVQKTIDHEREYRSHLFLLSL----AD 66

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G+  ++           PR+SP+ + +A+ +                    +++   ++ 
Sbjct: 67  GSVKQWTF--GKSKDTFPRWSPDGKTIAFLSNRSGKPQ--IWRLPADGGEARQLTFLKNG 122

Query: 260 ILAPRFSSNGKRA-----------------------------------------LISVQK 278
           +    +S NG+                                               + 
Sbjct: 123 VRQLCWSPNGRFLIALTSLGKEETLKEHEEKNKNEKEKRKLTPLIVERLQYKSDAAGFRD 182

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------QLYVMQ 332
           D+   +  +D ++   + LTN     IS + SPD   + F ++R           ++++ 
Sbjct: 183 DKQDVLIRIDAETGEMQALTNGDDEIISFAISPDGQTVAFAANRSEDPDFTFTRDIFLLD 242

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLV 387
            +     +I+ D    +    WSP G ++A               +        ++R L 
Sbjct: 243 IDSGKTTKIT-DGNGFFASLSWSPDGKMLAAIGHELEYLGATLNRVWTFDIPSGEKRALT 301

Query: 388 EDSNLQ------------APT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            + ++             AP+    W+  G  L F   + G     LY + L+G 
Sbjct: 302 ANWDVHVGDAMVGDMHSGAPSPGLIWNKEGNGLYFLASERGRV--NLYHVALDGT 354



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 99/312 (31%), Gaps = 67/312 (21%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK-VAYATYDDE------------ 234
             K  +  +  DG   R LT  ++ +     +SPN +  +A  +   E            
Sbjct: 98  SGKPQIWRLPADGGEARQLTFLKNGVRQL-CWSPNGRFLIALTSLGKEETLKEHEEKNKN 156

Query: 235 --------------------------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                                     D   V +         + + N    I++   S +
Sbjct: 157 EKEKRKLTPLIVERLQYKSDAAGFRDDKQDVLIRIDAETGEMQALTNGDDEIISFAISPD 216

Query: 269 GKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           G+    +  + E  D      I+ +D+ S  T ++T+      S S+SPD   +      
Sbjct: 217 GQTVAFAANRSEDPDFTFTRDIFLLDIDSGKTTKITDGNGFFASLSWSPDGKMLAAIGHE 276

Query: 323 -----EGKEQLYVMQSNGSDQKRISQDKE--------ASYFDPVWSP------QGDLIAF 363
                    +++       +++ ++ + +                SP      +G+ + F
Sbjct: 277 LEYLGATLNRVWTFDIPSGEKRALTANWDVHVGDAMVGDMHSGAPSPGLIWNKEGNGLYF 336

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 +  +  +  DG+    ++ D +L   +  P    +  +   D      LY++ L
Sbjct: 337 LASERGRVNLYHVALDGTITPSVIGDFHLYGLSIHP-HHHMAVAAISDPTHIGDLYAVSL 395

Query: 424 -NGRNETLINTP 434
            +GR + L N  
Sbjct: 396 RDGRRDKLTNAN 407


>gi|226228052|ref|YP_002762158.1| putative S9C family serine peptidase [Gemmatimonas aurantiaca T-27]
 gi|226091243|dbj|BAH39688.1| putative S9C family serine peptidase [Gemmatimonas aurantiaca T-27]
          Length = 688

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 107/301 (35%), Gaps = 64/301 (21%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   ++S+ +M+ DG   R+L    +      ++SP   ++A+    +    ++++    
Sbjct: 76  NDRRESSVWIMNADGTKNRFLVKGSNA-----KWSPEGSRIAFIANGEPSGQQIWVRYMD 130

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISV----------------------------- 276
            + A  +I           +S +G      +                             
Sbjct: 131 AEGATTQITRLTESPGDVEWSPDGTTLAFGMLVRQNDEWRIAMPAAPKGAKWTEPPRVVS 190

Query: 277 -----------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-- 323
                       ++    +++V        ++T   + +   ++ PD   ++F S R   
Sbjct: 191 KVKYRADRQGFLENGLRQLFTVPADGGTPRQITTGDWASNGTTWMPDGKALLFTSLRTED 250

Query: 324 -----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-----EKFAI 373
                 +  +Y +     D   +++ K     +PV SP G  IA+T +       +  A+
Sbjct: 251 SEYAWRESDIYKVDIASGDITALTKRK-GPDNNPVPSPDGKYIAYTGYDSTDATWKDAAM 309

Query: 374 GVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +M  +G   R+L E    ++P+   WSP G  + F+ + +G     LY + L G    +
Sbjct: 310 YIMDANGGNVRVLTE-KLDRSPSGMMWSPDGLGVYFNVENEGSR--NLYHVSLKGDVRQV 366

Query: 431 I 431
            
Sbjct: 367 T 367



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 93/292 (31%), Gaps = 74/292 (25%)

Query: 217 PRFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  SP+ +++ Y        +D     V++M+    +    +   +      ++S  G R
Sbjct: 56  PALSPDGKQILYTRTWTDQLNDRRESSVWIMNADGTKNRFLV---KGSN--AKWSPEGSR 110

Query: 272 ALISVQK---DEAMDIYSVDLQS--NATERLTNTLFINISASYSPDSSQIVF-------- 318
                      + + +  +D +       RLT +   ++   +SPD + + F        
Sbjct: 111 IAFIANGEPSGQQIWVRYMDAEGATTQITRLTESPG-DVE--WSPDGTTLAFGMLVRQND 167

Query: 319 ---------------------------ESDRE-----GKEQLYVMQSNGSDQKRISQDKE 346
                                       +DR+     G  QL+ + ++G   ++I+   +
Sbjct: 168 EWRIAMPAAPKGAKWTEPPRVVSKVKYRADRQGFLENGLRQLFTVPADGGTPRQITT-GD 226

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFA-------IGVMKKDGSQERLLVED-SNLQAPTWS 398
            +     W P G  + FT    E          I  +         L +       P  S
Sbjct: 227 WASNGTTWMPDGKALLFTSLRTEDSEYAWRESDIYKVDIASGDITALTKRKGPDNNPVPS 286

Query: 399 PSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDPQ---WVG 444
           P G+ + ++     D   K   +Y +D NG N  ++ T      P    W  
Sbjct: 287 PDGKYIAYTGYDSTDATWKDAAMYIMDANGGNVRVL-TEKLDRSPSGMMWSP 337



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 94/248 (37%), Gaps = 68/248 (27%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDS 313
           + AP  S +GK+ L +    + ++      ++ ++        L        +A +SP+ 
Sbjct: 53  VAAPALSPDGKQILYTRTWTDQLNDRRESSVWIMNADGTKNRFLVKGS----NAKWSPEG 108

Query: 314 SQIVFESDRE-GKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSG 368
           S+I F ++ E   +Q++V  M + G+   +I++  E S  D  WSP G  +AF       
Sbjct: 109 SRIAFIANGEPSGQQIWVRYMDAEGA-TTQITRLTE-SPGDVEWSPDGTTLAFGMLVRQN 166

Query: 369 EKFAIGV--------------------------------------MKKDGSQERLLVE-D 389
           +++ I +                                      +  DG   R +   D
Sbjct: 167 DEWRIAMPAAPKGAKWTEPPRVVSKVKYRADRQGFLENGLRQLFTVPADGGTPRQITTGD 226

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNGRNETLI-------NTPAYA 437
                 TW P G++L+F+  +  D       S +Y +D+   + T +       N P  +
Sbjct: 227 WASNGTTWMPDGKALLFTSLRTEDSEYAWRESDIYKVDIASGDITALTKRKGPDNNPVPS 286

Query: 438 SDPQWVGF 445
            D +++ +
Sbjct: 287 PDGKYIAY 294



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 28/144 (19%)

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY---FDPVWSPQGDLIAFTK------ 365
             V+ S   G+            + R++     ++     P  SP G  I +T+      
Sbjct: 23  TFVWSSSASGQS-------ATPPKDRLTIADYFNWEDVAAPALSPDGKQILYTRTWTDQL 75

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS--IDL 423
               + ++ +M  DG++ R LV+ SN +   WSP G  + F       +G +++   +D 
Sbjct: 76  NDRRESSVWIMNADGTKNRFLVKGSNAK---WSPEGSRIAFIAN-GEPSGQQIWVRYMDA 131

Query: 424 NGRN---ETLINTPAYASDPQWVG 444
            G       L  +P      +W  
Sbjct: 132 EGATTQITRLTESPGDV---EWSP 152


>gi|226225661|ref|YP_002759767.1| putative S9C family peptidase [Gemmatimonas aurantiaca T-27]
 gi|226088852|dbj|BAH37297.1| putative S9C family peptidase [Gemmatimonas aurantiaca T-27]
          Length = 691

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 89/289 (30%), Gaps = 63/289 (21%)

Query: 219 FSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            +P+ +++ Y         D     L     D +  R     S   APR+S +G + +  
Sbjct: 50  IAPDGRQLVYVRQNVDSLRDKRLRTLWTVNADGSAHRQLLPGSNETAPRWSPDGTQLVFR 109

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--------------- 320
             ++    ++++ + S A +RLT+     + A++SPD  QI F S               
Sbjct: 110 SDREGGAQLWTMQVASGALKRLTSVARGPLGAAWSPDGKQIAFTSLVPEPALSIAQQIAP 169

Query: 321 -------------------------DREGKEQLYVMQSNGSDQKRISQDKEA-------S 348
                                       G  QL+V+       +++++            
Sbjct: 170 PAGATWAPPARAFDKLIYRFDGAGELERGWSQLFVVDVASGTTRQLTKGAYHVGGGNGRG 229

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAI--------GVMKKDGSQERLLVEDSNLQAPTWSPS 400
              P WSP G  I  +      + I         V    G    L         P  SP 
Sbjct: 230 SGVPSWSPDGKTILISANRRPDYEIESTDTEVMAVDVVSGDVRALTTRFGPDNRPMMSPD 289

Query: 401 GRSLIFSRKKD---GDTGSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
           G+ + F+   D   G    +LY +  +G     +          P W  
Sbjct: 290 GQWIAFTGYDDRRLGYQNHELYVMRADGSARRSLTASYDRSVGSPVWAP 338



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 52/315 (16%), Positives = 98/315 (31%), Gaps = 70/315 (22%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T  +   +   L        G    ++ V    GA  R  + +R        +SP+ +++
Sbjct: 95  TAPRWSPDGTQLVFRSDREGGAQLWTMQVAS--GALKRLTSVARGP--LGAAWSPDGKQI 150

Query: 227 AYATYDDEDILRV--------------------------------------YLMDTRIDR 248
           A+ +   E  L +                                        +      
Sbjct: 151 AFTSLVPEPALSIAQQIAPPAGATWAPPARAFDKLIYRFDGAGELERGWSQLFVVDVASG 210

Query: 249 APKRIGNFRSMILA--------PRFSSNGKRALISVQKDEAMDI-------YSVDLQSNA 293
             +++      +          P +S +GK  LIS  +    +I        +VD+ S  
Sbjct: 211 TTRQLTKGAYHVGGGNGRGSGVPSWSPDGKTILISANRRPDYEIESTDTEVMAVDVVSGD 270

Query: 294 TERLTNTLFINISASYSPDSSQIVFESD---REG--KEQLYVMQSNGSDQKRISQDKEAS 348
              LT     +     SPD   I F      R G    +LYVM+++GS ++ ++   + S
Sbjct: 271 VRALTTRFGPDNRPMMSPDGQWIAFTGYDDRRLGYQNHELYVMRADGSARRSLTASYDRS 330

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-------EDSNLQAPTWSPSG 401
              PVW+P    +     +  +  +G +   G   R +                + S +G
Sbjct: 331 VGSPVWAPDSRGLYVELNNEGETQVGYVPLAGGVPRTIARHLGNGQTAYEGSGYSVSRAG 390

Query: 402 RSLIFSRKKDGDTGS 416
           R + F   +    G 
Sbjct: 391 R-VAFVTSRGNHPGG 404



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 57/191 (29%), Gaps = 24/191 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILR----VYLMDTRIDRAPKRIGNFRSMILA 262
             +R      P  SP+ Q +A+  YDD  +      +Y+M            ++   + +
Sbjct: 274 LTTRFGPDNRPMMSPDGQWIAFTGYDDRRLGYQNHELYVMRADGSARRSLTASYDRSVGS 333

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-----INISASYSPDSSQIV 317
           P ++ + +   + +  +    +  V L       +   L         S      + ++ 
Sbjct: 334 PVWAPDSRGLYVELNNEGETQVGYVPLAGGVPRTIARHLGNGQTAYEGSGYSVSRAGRVA 393

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--------WSPQGDLIAFTKFSGE 369
           F + R          + G    ++     A              W+P       +   G 
Sbjct: 394 FVTSRGNHPGGVATAAIGDSSPKVLAGMNAVLLANARMGEVEMFWTP-------SSHDGW 446

Query: 370 KFAIGVMKKDG 380
           +    ++K  G
Sbjct: 447 RVQSWLIKPPG 457


>gi|332530720|ref|ZP_08406649.1| hypothetical protein HGR_12282 [Hylemonella gracilis ATCC 19624]
 gi|332039810|gb|EGI76207.1| hypothetical protein HGR_12282 [Hylemonella gracilis ATCC 19624]
          Length = 638

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 108/268 (40%), Gaps = 44/268 (16%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P  Q             R+Y+ +       + + +  ++     FSS+G+  + + ++D
Sbjct: 27  APATQSPLLLNRIGPSASRLYIANAD-GSNERLLIDSGTLDYNASFSSDGQWIVFTSERD 85

Query: 280 E--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGS 336
                ++Y         ERLT++  ++ +A +SPD S++ F S R+G    ++V+     
Sbjct: 86  GLGNSNLYRARADGTQVERLTDSPAVDDAAVFSPDGSKVAFVSTRDGFLANIWVLDLQTR 145

Query: 337 DQKRIS----------QDKEASYFDPVWSPQGDLIAFTKFSGEKFA-------------- 372
             + ++          Q+  + +F P WSP G  +AF+     ++               
Sbjct: 146 KLRNLTGIKGVQADDLQNSPSGFFRPSWSPDGQWLAFSSDRNTEWKGHHDGAGWEHTQEL 205

Query: 373 -IGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDT------------GSK 417
            I V++ DG+  R +    +    +P WS  G+ ++F       T             S+
Sbjct: 206 SIYVIRVDGTGLRRVASRKDHCLGSPRWSGDGKRIVFYETLAEYTYWVLRPDLLLKIDSQ 265

Query: 418 LYSIDLN-GRNETLINTPAYASDPQWVG 444
           + S+D++ G        P +   PQ++G
Sbjct: 266 IVSVDVDSGARTVHTEGPGFKISPQYIG 293



 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 69/338 (20%), Positives = 114/338 (33%), Gaps = 85/338 (25%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G   + L + + DG+N R L  S   + +   FS + Q + + +  D             
Sbjct: 40  GPSASRLYIANADGSNERLLIDSG-TLDYNASFSSDGQWIVFTSERDGLGNSNLYRARAD 98

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-MDIYSVDLQSNATERLT------- 298
               +R+ +  ++  A  FS +G +      +D    +I+ +DLQ+     LT       
Sbjct: 99  GTQVERLTDSPAVDDAAVFSPDGSKVAFVSTRDGFLANIWVLDLQTRKLRNLTGIKGVQA 158

Query: 299 ----NTLFINISASYSPDSSQIVFESDRE----------GKEQ-----LYVMQSNGSDQK 339
               N+       S+SPD   + F SDR           G E      +YV++ +G+  +
Sbjct: 159 DDLQNSPSGFFRPSWSPDGQWLAFSSDRNTEWKGHHDGAGWEHTQELSIYVIRVDGTGLR 218

Query: 340 RISQDKEASYFDPVWSPQGDLIAF-----------------------------------T 364
           R++  K+     P WS  G  I F                                    
Sbjct: 219 RVASRKDHCLGSPRWSGDGKRIVFYETLAEYTYWVLRPDLLLKIDSQIVSVDVDSGARTV 278

Query: 365 KFSGEKFAIG---------VMKKDGSQE---------RLLVEDSNLQAPTWSPSGRSLIF 406
              G  F I          V ++ G            R +V+   L+ P WS  GR +++
Sbjct: 279 HTEGPGFKISPQYIGNDEIVYRRKGGPAEGLYSTVPGRPVVKLEGLRTPAWSTDGRRVVY 338

Query: 407 --SRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQ 441
                +       LYS D  GR     +  PA+A D  
Sbjct: 339 EKFTWRGWTQNQALYSWDA-GRPYRYTDVWPAFAKDGT 375



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 62/313 (19%), Positives = 111/313 (35%), Gaps = 57/313 (18%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+++   +        +L   D  G   RY           P F+ +   V  A  +D  
Sbjct: 335 RVVYEKFTWRGWTQNQALYSWDA-GRPYRYT-------DVWPAFAKDGTMVLTAKGEDSS 386

Query: 236 I----------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------SVQKD 279
           +           RVY +  +    P  +    +    P +S +G+  +       + +  
Sbjct: 387 VDIMRPDGSARRRVYDVSRQSGLDPVLVKRGLAGAFFPVWSPDGEWIVFGVGEWFTQRGR 446

Query: 280 EAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFE-------SDREGKEQLYVM 331
               +  V    +  E+LT+    N    SYS D  ++VF        S   G   L V+
Sbjct: 447 GRAKLMRVRRDGSGLEQLTDDSIFNAGFPSYSADGKEVVFRIANEDPKSASLGG--LAVL 504

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERL 385
                  +RI+         P+WSP G  I F +           F +  ++ DGS  + 
Sbjct: 505 NLETRQIRRITA---GYDNMPIWSPDGSRILFNRGVRNPNSIWSNFDLYTVRPDGSDLQR 561

Query: 386 LV-EDSNLQAPTWSPSGRSLIFSRKKDG------------DTGSKLYSIDLNGRNETLIN 432
           L    ++   P W+P G+ ++++    G                +L+ +D +GRN+  I 
Sbjct: 562 LTSHPASDGHPVWTPDGKQILYNSGMAGYRDEACHYDQTFQPYGQLFVMDADGRNKRQIT 621

Query: 433 TPAY-ASDPQWVG 444
              +  S PQ+V 
Sbjct: 622 DSIWEDSTPQYVP 634



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 54/337 (16%), Positives = 113/337 (33%), Gaps = 84/337 (24%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                 + S+ V+  DG  +R +   +D  L  PR+S + +++ +     E    V   D
Sbjct: 198 GWEHTQELSIYVIRVDGTGLRRVASRKDHCLGSPRWSGDGKRIVFYETLAEYTYWVLRPD 257

Query: 244 TRIDRAPKRI------------GNFRSMILA----------------------------- 262
             +    + +                   ++                             
Sbjct: 258 LLLKIDSQIVSVDVDSGARTVHTEGPGFKISPQYIGNDEIVYRRKGGPAEGLYSTVPGRP 317

Query: 263 ---------PRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                    P +S++G+R +      +    +       +    R T     ++  +++ 
Sbjct: 318 VVKLEGLRTPAWSTDGRRVVYEKFTWRGWTQNQALYSWDAGRPYRYT-----DVWPAFAK 372

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKR-------------ISQDKEASYFDPVWSPQG 358
           D + ++     +    +  M+ +GS ++R             + +   A  F PVWSP G
Sbjct: 373 DGTMVLTAKGEDSSVDI--MRPDGSARRRVYDVSRQSGLDPVLVKRGLAGAFFPVWSPDG 430

Query: 359 DLIA------FTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIF---S 407
           + I       FT+    +  +  +++DGS    L +DS  N   P++S  G+ ++F   +
Sbjct: 431 EWIVFGVGEWFTQRGRGRAKLMRVRRDGSGLEQLTDDSIFNAGFPSYSADGKEVVFRIAN 490

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                 +   L  ++L  R    I T  Y + P W  
Sbjct: 491 EDPKSASLGGLAVLNLETRQIRRI-TAGYDNMPIWSP 526



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 77/199 (38%), Gaps = 28/199 (14%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              G  +  L  + RDG+ +  LT         P +S + ++V +    +ED     L  
Sbjct: 442 TQRGRGRAKLMRVRRDGSGLEQLTDDSIFNAGFPSYSADGKEVVF-RIANEDPKSASLGG 500

Query: 244 TRI----DRAPKRIGNFRSMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNA 293
             +     R  +RI         P +S +G R L +             D+Y+V    + 
Sbjct: 501 LAVLNLETRQIRRIT--AGYDNMPIWSPDGSRILFNRGVRNPNSIWSNFDLYTVRPDGSD 558

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREG--------------KEQLYVMQSNGSDQK 339
            +RLT+    +    ++PD  QI++ S   G                QL+VM ++G +++
Sbjct: 559 LQRLTSHPASDGHPVWTPDGKQILYNSGMAGYRDEACHYDQTFQPYGQLFVMDADGRNKR 618

Query: 340 RISQDKEASYFDPVWSPQG 358
           +I+ D       P + P G
Sbjct: 619 QIT-DSIWEDSTPQYVPPG 636



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 57/391 (14%), Positives = 121/391 (30%), Gaps = 110/391 (28%)

Query: 159 SDDIYQSITGEKGDFNSRILF-------VSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           +D   + +  + G  +    F       V  S   G+  ++L     DG  +  LT S  
Sbjct: 51  ADGSNERLLIDSGTLDYNASFSSDGQWIVFTSERDGLGNSNLYRARADGTQVERLTDS-P 109

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG----------NFRSMIL 261
            +     FSP+  KVA+ +  D  +  ++++D +  +     G          N  S   
Sbjct: 110 AVDDAAVFSPDGSKVAFVSTRDGFLANIWVLDLQTRKLRNLTGIKGVQADDLQNSPSGFF 169

Query: 262 APRFSSNGKRALISVQKD---------------EAMDIYSVDLQSNATERLTNTLFIN-I 305
            P +S +G+    S  ++               + + IY + +      R+ +       
Sbjct: 170 RPSWSPDGQWLAFSSDRNTEWKGHHDGAGWEHTQELSIYVIRVDGTGLRRVASRKDHCLG 229

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSN--------------GSDQKRISQDKEA---- 347
           S  +S D  +IVF  +   +   +V++ +               S  + +  +       
Sbjct: 230 SPRWSGDGKRIVF-YETLAEYTYWVLRPDLLLKIDSQIVSVDVDSGARTVHTEGPGFKIS 288

Query: 348 ----------------------------------SYFDPVWSPQGDLIAFTKF--SGEKF 371
                                                 P WS  G  + + KF   G   
Sbjct: 289 PQYIGNDEIVYRRKGGPAEGLYSTVPGRPVVKLEGLRTPAWSTDGRRVVYEKFTWRGWTQ 348

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSID 422
              +   D  +     +      P ++  G  ++ ++         + DG    ++Y + 
Sbjct: 349 NQALYSWDAGRPYRYTD----VWPAFAKDGTMVLTAKGEDSSVDIMRPDGSARRRVYDVS 404

Query: 423 L-NGRNETLIN-------TPAYASDPQWVGF 445
             +G +  L+         P ++ D +W+ F
Sbjct: 405 RQSGLDPVLVKRGLAGAFFPVWSPDGEWIVF 435



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 66/176 (37%), Gaps = 24/176 (13%)

Query: 160 DDIYQSITGE-KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           D I+ +       D    +  ++           L V++ +   IR +T   D +   P 
Sbjct: 467 DSIFNAGFPSYSADGKEVVFRIANEDPKSASLGGLAVLNLETRQIRRITAGYDNM---PI 523

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-----KRIGNFRSMILAPRFSSNGKRAL 273
           +SP+  ++ +      +   ++         P     +R+ +  +    P ++ +GK+ L
Sbjct: 524 WSPDGSRILF-NRGVRNPNSIWSNFDLYTVRPDGSDLQRLTSHPASDGHPVWTPDGKQIL 582

Query: 274 I----SVQKDEA----------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                +  +DEA            ++ +D       ++T++++ + +  Y P  ++
Sbjct: 583 YNSGMAGYRDEACHYDQTFQPYGQLFVMDADGRNKRQITDSIWEDSTPQYVPPGAR 638


>gi|148656436|ref|YP_001276641.1| peptidase S41 [Roseiflexus sp. RS-1]
 gi|148568546|gb|ABQ90691.1| peptidase S41 [Roseiflexus sp. RS-1]
          Length = 1082

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 103/294 (35%), Gaps = 48/294 (16%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  + V+  DG  +R +T   D       +SP+   + + +  +     +Y +    D
Sbjct: 70  TGQGDVYVVPLDGGEVRRVT-YHDTQSAVECWSPDGNAIYFTSQRERQGTAIYRVAISGD 128

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKD----------EAMDIYSVD--LQSNATE 295
              + I      +     S  G+    S+ +D             +++       ++  +
Sbjct: 129 TPIRWIAQPYERLGTVSVSPCGRWIAFSLLRDPWWRRGPNPYGGAELWLASNAPDADDFQ 188

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           RL++   +N    ++PDS  I F SDR+G E L+V+  +G   +R++   +     P  S
Sbjct: 189 RLSDAPGLNYCPMWTPDSGLIYFVSDRDGCENLWVVPRDGGVAERVTSFTDGRLLWPSIS 248

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQ----------------ERLLVEDSNLQAPTWSP 399
             G  IAF +     F I +                        R+     ++Q    SP
Sbjct: 249 ADGKKIAFER----DFGIWIFDLTSGDMAPIPITVRQDAKLTPVRVQTYTRDVQELALSP 304

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNE---------TLINTPAYASDPQWVG 444
            G+ + F  +       K+++   +  NE          +  T    SD  W  
Sbjct: 305 DGKKIAFIVR------GKIFADFADKENERDPRQGLAYRVSQTAFRDSDVSWSP 352



 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 84/256 (32%), Gaps = 30/256 (11%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             L  P   P   +VA+    D        +        +R+    +  + PR+S +G  
Sbjct: 9   PYLRAPSLDPTGNRVAFVYAGD------IWLVAADGGRAERLTAHPAGHMLPRWSPDGAA 62

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYV 330
              +  +    D+Y V L      R+T     +    +SPD + I F S RE     +Y 
Sbjct: 63  IACTSTRTGQGDVYVVPLDGGEVRRVTYHDTQSAVECWSPDGNAIYFTSQRERQGTAIYR 122

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG----------EKFAIGVMK--K 378
           +  +G    R              SP G  IAF+                  + +     
Sbjct: 123 VAISGDTPIRWIAQPYERLGTVSVSPCGRWIAFSLLRDPWWRRGPNPYGGAELWLASNAP 182

Query: 379 DGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT---- 433
           D    + L +       P W+P    + F   +DG     L+ +  +G     + +    
Sbjct: 183 DADDFQRLSDAPGLNYCPMWTPDSGLIYFVSDRDG--CENLWVVPRDGGVAERVTSFTDG 240

Query: 434 ----PAYASDPQWVGF 445
               P+ ++D + + F
Sbjct: 241 RLLWPSISADGKKIAF 256



 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 45/214 (21%), Positives = 84/214 (39%), Gaps = 15/214 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-----FSSNGKRA 272
             SP+ +K+A+        +     D   +R P++   +R    A R     +S + +  
Sbjct: 301 ALSPDGKKIAFIV---RGKIFADFADKENERDPRQGLAYRVSQTAFRDSDVSWSPDSRSL 357

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +    +    ++Y  D    +  RLT       +  +SPD   I + S   G +++ ++ 
Sbjct: 358 VYVSDRHGDEEVYRYDFPGRSETRLTYGPKRKSAPCFSPDGRWIAYAS---GDDEIRLID 414

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSN 391
                 +   +          WSP    +AF       F  + V + D  Q   +   SN
Sbjct: 415 VVSGADRGFIRAHFVFGASFSWSPDSRWLAFCAQDERFFSNLYVQRIDEEQPHQISFLSN 474

Query: 392 LQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +QA  P WSP GR ++F+  +     S++  +DL
Sbjct: 475 IQAAGPLWSPDGRFIVFTTGQY-RAESQIARVDL 507



 Score =  113 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 52/271 (19%), Positives = 98/271 (36%), Gaps = 26/271 (9%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           L  + + V+ +    + ++  DG     LT         PR+SP+   +A  +       
Sbjct: 16  LDPTGNRVAFVYAGDIWLVAADGGRAERLTAHPAG-HMLPRWSPDGAAIACTSTRTGQG- 73

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATER 296
            VY++        +R+    +      +S +G     + Q++ +   IY V +  +   R
Sbjct: 74  DVYVVPLD-GGEVRRVTYHDTQSAVECWSPDGNAIYFTSQRERQGTAIYRVAISGDTPIR 132

Query: 297 LTNTLFINISA-SYSPDSSQIVFESDRE----------GKEQLYVMQ--SNGSDQKRISQ 343
                +  +   S SP    I F   R+          G  +L++     +  D +R+S 
Sbjct: 133 WIAQPYERLGTVSVSPCGRWIAFSLLRDPWWRRGPNPYGGAELWLASNAPDADDFQRLS- 191

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSG 401
           D     + P+W+P   LI F         + V+ +DG     +    D  L  P+ S  G
Sbjct: 192 DAPGLNYCPMWTPDSGLIYFVSDRDGCENLWVVPRDGGVAERVTSFTDGRLLWPSISADG 251

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + + F R         ++  DL   +   I 
Sbjct: 252 KKIAFERDFG------IWIFDLTSGDMAPIP 276



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 61/375 (16%), Positives = 115/375 (30%), Gaps = 69/375 (18%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR-ILFVSESVVSGIIKN 191
           +   K         +    R+             +      +SR +++VS+         
Sbjct: 312 IVRGKIFADFADKENERDPRQGLAYRVSQTAFRDSDVSWSPDSRSLVYVSDRHGD----E 367

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   D  G +   LT    +    P FSP+ + +AYA+ DDE    + L+D        
Sbjct: 368 EVYRYDFPGRSETRLTYGPKRK-SAPCFSPDGRWIAYASGDDE----IRLIDVVSGADRG 422

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLFIN-ISASY 309
            I        +  +S + +      Q +    ++Y   +      +++    I      +
Sbjct: 423 FIRAHFVFGASFSWSPDSRWLAFCAQDERFFSNLYVQRIDEEQPHQISFLSNIQAAGPLW 482

Query: 310 SPDSSQIVFESDR-EGKEQLYVMQSNGSDQ-------KRI-------SQDKEASYFDPVW 354
           SPD   IVF + +   + Q+  +              +R+       ++  E++      
Sbjct: 483 SPDGRFIVFTTGQYRAESQIARVDLQPQPPIFREAEFERLFESAQSSTRKSESASRHVAH 542

Query: 355 SPQGDL-----------IAFTKFSGEKFAIGVMKKDGSQ--------------------- 382
            P               +   +  G      V +++GS+                     
Sbjct: 543 VPDHKRHTDADREPLPVLPIVEPDGPPEDGTVHEREGSKSVKASQTVKEIRIILSGIERR 602

Query: 383 ERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID---LNGRNETLINTPA--- 435
            RLL     +  A   SP GR LI S    G        +D    +     L NT     
Sbjct: 603 LRLLTPPQMDATALCISPDGRDLICSATVAGRQNLWTLPLDEARADQGPRQLTNTSGLKS 662

Query: 436 ---YASDPQWVGFMD 447
              +A D + + F+D
Sbjct: 663 HAWFAPDGKSICFLD 677


>gi|302326672|gb|ADL25873.1| oxidoreductase, Gfo/Idh/MocA family [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 668

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 100/284 (35%), Gaps = 41/284 (14%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
              E  ++++   F++ +    I K +L           Y+    +  + +P    +   
Sbjct: 394 CVIEAPNWSADGTFLTYNSNGRIFKYTLATDKVTEIESHYVDNCNNDHVLDP----DGSG 449

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----SSNGKRALISVQKDEA 281
           V  + +  ED L          R P+ +       LAP +    + +GK      +++ +
Sbjct: 450 VYVSHHTKEDGLSRIYKIYFDGREPRLVTP-----LAPSYLHGITPDGKTLAYCAERNGS 504

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIY++        RLT    +N    Y  +   I F S+R G+ Q + M+++GS+Q ++
Sbjct: 505 YDIYTIPAAGGNETRLTTAFGLNDGPEYDCNGEYIWFNSERSGRMQAFCMKADGSEQTQM 564

Query: 342 SQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVMK------------K 378
           + D   + + P  SP    +                  +   + +M+             
Sbjct: 565 THDLHWNTWFPHISPDRQKVVMVAYTETDVRPGEHVPNKNVELRLMRRALPVESNCALPA 624

Query: 379 DG-----SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           D      +  +L      +   +W+P  +   F     GD  S 
Sbjct: 625 DSWSAPQTILKLFGGQGTINVNSWAPDSKRFAFVSYIHGDDPSN 668



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 79/210 (37%), Gaps = 16/210 (7%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
               + D   + + D     A K +  F  +I AP +S++G         +    I+   
Sbjct: 366 TWNRNGDKSILQVFDIETGEA-KVLKEFDCVIEAPNWSADGTFLTY----NSNGRIFKYT 420

Query: 289 LQSNATERLTNTLFINIS--ASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ 343
           L ++    + +    N +      PD S  V+ S     +G  ++Y +  +G + + ++ 
Sbjct: 421 LATDKVTEIESHYVDNCNNDHVLDPDGSG-VYVSHHTKEDGLSRIYKIYFDGREPRLVTP 479

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGR 402
              A  +    +P G  +A+       + I  +   G  E RL         P +  +G 
Sbjct: 480 L--APSYLHGITPDGKTLAYCAERNGSYDIYTIPAAGGNETRLTTAFGLNDGPEYDCNGE 537

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            + F+ ++ G   +  + +  +G  +T + 
Sbjct: 538 YIWFNSERSGRMQA--FCMKADGSEQTQMT 565



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 81/206 (39%), Gaps = 29/206 (14%)

Query: 244 TRIDRAPKRIGNFRSMILAP--RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           T +D+  ++ G   +  ++P   ++ NG +            +   D+++   + L    
Sbjct: 344 TLMDKIREQFGVSYTFEISPGETWNRNGDK----------SILQVFDIETGEAKVLKEFD 393

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDL 360
            +  + ++S D + + + S      +++           I S   +    D V  P G  
Sbjct: 394 CVIEAPNWSADGTFLTYNS----NGRIFKYTLATDKVTEIESHYVDNCNNDHVLDPDGSG 449

Query: 361 IAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRSLIFSRKKDGDT 414
           +  +  +       I  +  DG + RL+       AP++    +P G++L +  +++G  
Sbjct: 450 VYVSHHTKEDGLSRIYKIYFDGREPRLVT----PLAPSYLHGITPDGKTLAYCAERNGS- 504

Query: 415 GSKLYSIDLNGRNETLINTPAYASDP 440
              +Y+I   G NET + T    +D 
Sbjct: 505 -YDIYTIPAAGGNETRLTTAFGLNDG 529


>gi|261415324|ref|YP_003249007.1| oxidoreductase domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371780|gb|ACX74525.1| oxidoreductase domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 668

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 100/284 (35%), Gaps = 41/284 (14%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
              E  ++++   F++ +    I K +L           Y+    +  + +P    +   
Sbjct: 394 CVIEAPNWSADGTFLTYNSNGRIFKYTLATDKVTEIESHYVDNCNNDHVLDP----DGSG 449

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----SSNGKRALISVQKDEA 281
           V  + +  ED L          R P+ +       LAP +    + +GK      +++ +
Sbjct: 450 VYVSHHTKEDGLSRIYKIYFDGREPRLVTP-----LAPSYLHGITPDGKTLAYCAERNGS 504

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIY++        RLT    +N    Y  +   I F S+R G+ Q + M+++GS+Q ++
Sbjct: 505 YDIYTIPAAGGNETRLTTAFGLNDGPEYDCNGEYIWFNSERSGRMQAFCMKADGSEQTQM 564

Query: 342 SQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVMK------------K 378
           + D   + + P  SP    +                  +   + +M+             
Sbjct: 565 THDLHWNTWFPHISPDRQKVVMVAYTETDVRPGEHVPNKNVELRLMRRALPVESNCALPA 624

Query: 379 DG-----SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           D      +  +L      +   +W+P  +   F     GD  S 
Sbjct: 625 DSWSAPQTILKLFGGQGTINVNSWAPDSKRFAFVSYIHGDDPSN 668



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 79/210 (37%), Gaps = 16/210 (7%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
               + D   + + D     A K +  F  +I AP +S++G         +    I+   
Sbjct: 366 TWNRNGDKSILQVFDIETGEA-KVLKEFDCVIEAPNWSADGTFLTY----NSNGRIFKYT 420

Query: 289 LQSNATERLTNTLFINIS--ASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ 343
           L ++    + +    N +      PD S  V+ S     +G  ++Y +  +G + + ++ 
Sbjct: 421 LATDKVTEIESHYVDNCNNDHVLDPDGSG-VYVSHHTKEDGLSRIYKIYFDGREPRLVTP 479

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGR 402
              A  +    +P G  +A+       + I  +   G  E RL         P +  +G 
Sbjct: 480 L--APSYLHGITPDGKTLAYCAERNGSYDIYTIPAAGGNETRLTTAFGLNDGPEYDCNGE 537

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            + F+ ++ G   +  + +  +G  +T + 
Sbjct: 538 YIWFNSERSGRMQA--FCMKADGSEQTQMT 565



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 81/206 (39%), Gaps = 29/206 (14%)

Query: 244 TRIDRAPKRIGNFRSMILAP--RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           T +D+  ++ G   +  ++P   ++ NG +            +   D+++   + L    
Sbjct: 344 TLMDKIREQFGVSYTFEISPGETWNRNGDK----------SILQVFDIETGEAKVLKEFD 393

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDL 360
            +  + ++S D + + + S      +++           I S   +    D V  P G  
Sbjct: 394 CVIEAPNWSADGTFLTYNS----NGRIFKYTLATDKVTEIESHYVDNCNNDHVLDPDGSG 449

Query: 361 IAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRSLIFSRKKDGDT 414
           +  +  +       I  +  DG + RL+       AP++    +P G++L +  +++G  
Sbjct: 450 VYVSHHTKEDGLSRIYKIYFDGREPRLVT----PLAPSYLHGITPDGKTLAYCAERNGS- 504

Query: 415 GSKLYSIDLNGRNETLINTPAYASDP 440
              +Y+I   G NET + T    +D 
Sbjct: 505 -YDIYTIPAAGGNETRLTTAFGLNDG 529


>gi|312111892|ref|YP_003990208.1| WD40-like beta Propeller containing protein [Geobacillus sp.
           Y4.1MC1]
 gi|311216993|gb|ADP75597.1| WD40-like beta Propeller containing protein [Geobacillus sp.
           Y4.1MC1]
          Length = 669

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 89/238 (37%), Gaps = 55/238 (23%)

Query: 260 ILAPRFSSNGKRALIS-----VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +  P+FS +GK+ +        +++    ++ + L   + ++ T     +    +SPD  
Sbjct: 24  VSDPQFSPDGKKVIFVQKTIDHEREYRSHLFLLSLADGSVKQWTFGKSKDTFPRWSPDGK 83

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTK-------- 365
            I F S+R GK Q++ + ++G + ++++  K        WSP G  LIA T         
Sbjct: 84  TIAFLSNRSGKPQIWRLPADGGEARQLTFLKNG-VRQLCWSPNGRFLIALTSLGKEETLK 142

Query: 366 --------------------------------FSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                                              ++  +  +  +  + + L    + +
Sbjct: 143 EHEEKNKNEKEKRKLTPLIVERLQYKSDAAGFRDDKQDVLIRIDAETGEMQALTN-GDDE 201

Query: 394 APTW--SPSGRSLIFSRKKDGD----TGSKLYSIDLN-GRNETLINTPAYASDPQWVG 444
             ++  SP G+++ F+  +  D        ++ +D++ G+   + +   + +   W  
Sbjct: 202 IISFAISPDGQTVAFAANRSEDPDFTFTRDIFLLDIDSGKTTKITDGNGFFASLSWSP 259



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 54/355 (15%), Positives = 109/355 (30%), Gaps = 80/355 (22%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
           + K      A      H +SD    S  G+K  F  + +       S +   SL     D
Sbjct: 6   MKKTTRGIAAEDLFRIHFVSDP-QFSPDGKKVIFVQKTIDHEREYRSHLFLLSL----AD 60

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G+  ++           PR+SP+ + +A+ +                    +++   ++ 
Sbjct: 61  GSVKQWTF--GKSKDTFPRWSPDGKTIAFLSNRSGKPQ--IWRLPADGGEARQLTFLKNG 116

Query: 260 ILAPRFSSNGKRA-----------------------------------------LISVQK 278
           +    +S NG+                                               + 
Sbjct: 117 VRQLCWSPNGRFLIALTSLGKEETLKEHEEKNKNEKEKRKLTPLIVERLQYKSDAAGFRD 176

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------QLYVMQ 332
           D+   +  +D ++   + LTN     IS + SPD   + F ++R           ++++ 
Sbjct: 177 DKQDVLIRIDAETGEMQALTNGDDEIISFAISPDGQTVAFAANRSEDPDFTFTRDIFLLD 236

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLV 387
            +     +I+ D    +    WSP G ++A               +        ++R L 
Sbjct: 237 IDSGKTTKIT-DGNGFFASLSWSPDGKMLAAIGHELEYLGATLNRVWTFDIPSGEKRALT 295

Query: 388 EDSNLQ------------APT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            + ++             AP+    W+  G  L F   + G     LY + L+G 
Sbjct: 296 ANWDVHVGDAMVGDMHSGAPSPGLIWNKEGNGLYFLASERGRV--NLYHVALDGT 348



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 99/312 (31%), Gaps = 67/312 (21%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK-VAYATYDDE------------ 234
             K  +  +  DG   R LT  ++ +     +SPN +  +A  +   E            
Sbjct: 92  SGKPQIWRLPADGGEARQLTFLKNGVRQL-CWSPNGRFLIALTSLGKEETLKEHEEKNKN 150

Query: 235 --------------------------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                                     D   V +         + + N    I++   S +
Sbjct: 151 EKEKRKLTPLIVERLQYKSDAAGFRDDKQDVLIRIDAETGEMQALTNGDDEIISFAISPD 210

Query: 269 GKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           G+    +  + E  D      I+ +D+ S  T ++T+      S S+SPD   +      
Sbjct: 211 GQTVAFAANRSEDPDFTFTRDIFLLDIDSGKTTKITDGNGFFASLSWSPDGKMLAAIGHE 270

Query: 323 -----EGKEQLYVMQSNGSDQKRISQDKE--------ASYFDPVWSP------QGDLIAF 363
                    +++       +++ ++ + +                SP      +G+ + F
Sbjct: 271 LEYLGATLNRVWTFDIPSGEKRALTANWDVHVGDAMVGDMHSGAPSPGLIWNKEGNGLYF 330

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 +  +  +  DG+    ++ D +L   +  P    +  +   D      LY++ L
Sbjct: 331 LASERGRVNLYHVALDGTITPSVIGDFHLYGLSIHP-HHHMAVAAISDPTHIGDLYAVSL 389

Query: 424 -NGRNETLINTP 434
            +GR + L N  
Sbjct: 390 RDGRRDKLTNAN 401


>gi|156743096|ref|YP_001433225.1| peptidase S41 [Roseiflexus castenholzii DSM 13941]
 gi|156234424|gb|ABU59207.1| peptidase S41 [Roseiflexus castenholzii DSM 13941]
          Length = 1090

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 81/241 (33%), Gaps = 24/241 (9%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P   P   ++A+    D     ++L+D       +R+    +  + PR+S +G     + 
Sbjct: 15  PSIDPAGSRIAFVYAGD-----IWLVDV-SGGQAERLTAHPANHMLPRWSPDGSAIAYTS 68

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNG 335
            +    D+Y + L      R+T     +    +SPD + I F S RE +   +Y + ++G
Sbjct: 69  SRTGQGDVYVLPLNGGEVRRITYHEAQSAVECWSPDGAAIYFTSQRERQGAAIYRIAASG 128

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG----------EKFAIGVMK--KDGSQE 383
               R              SP G  +AF+                  + ++    D    
Sbjct: 129 GTPVRWIAQPYERLGTVAVSPCGRWLAFSLMRDLWWRRGPNPYGGAELWLVSNAPDADDF 188

Query: 384 RLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--TPAYASDP 440
             L +       P WSP  + + F   +DG     L+     G     I   T      P
Sbjct: 189 FQLSDAPGMNYCPMWSPDSQLIFFVSDRDGS--ENLWVAPREGGVAERITAFTDGRLLWP 246

Query: 441 Q 441
            
Sbjct: 247 S 247



 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 57/312 (18%), Positives = 103/312 (33%), Gaps = 54/312 (17%)

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
              +  L DV   +            + R  AH         +     D  S I + S  
Sbjct: 28  YAGDIWLVDVSGGQ------------AERLTAH----PANHMLPRWSPDG-SAIAYTSSR 70

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              G     + V+  +G  +R +T    Q   E  +SP+   + + +  +     +Y + 
Sbjct: 71  TGQG----DVYVLPLNGGEVRRITYHEAQSAVE-CWSPDGAAIYFTSQRERQGAAIYRIA 125

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD----------EAMDIYSVD--LQS 291
                  + I      +     S  G+    S+ +D             +++ V     +
Sbjct: 126 ASGGTPVRWIAQPYERLGTVAVSPCGRWLAFSLMRDLWWRRGPNPYGGAELWLVSNAPDA 185

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           +   +L++   +N    +SPDS  I F SDR+G E L+V    G   +RI+   +     
Sbjct: 186 DDFFQLSDAPGMNYCPMWSPDSQLIFFVSDRDGSENLWVAPREGGVAERITAFTDGRLLW 245

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ----------------ERLLVEDSNLQAP 395
           P  S  G +IAF +     F I  +                       R+     +    
Sbjct: 246 PSISADGRMIAFER----DFGIWTLDLASGATTRVPIQVRQDTKVTPVRVQTYTRDAGEL 301

Query: 396 TWSPSGRSLIFS 407
             SP G+ + F+
Sbjct: 302 ALSPDGKKVAFT 313



 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 54/198 (27%), Positives = 77/198 (38%), Gaps = 21/198 (10%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP     G R       D    I+ VD+     ERLT     ++   +SPD S I + S 
Sbjct: 14  APSIDPAGSRIAFVYAGD----IWLVDVSGGQAERLTAHPANHMLPRWSPDGSAIAYTSS 69

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDG 380
           R G+  +YV+  NG + +RI+   EA      WSP G  I FT     +  AI  +   G
Sbjct: 70  RTGQGDVYVLPLNGGEVRRITY-HEAQSAVECWSPDGAAIYFTSQRERQGAAIYRIAASG 128

Query: 381 SQERLLVEDS--NLQAPTWSPSGRSLIFSRKKD--------GDTGSKLYSI----DLNGR 426
                 +      L     SP GR L FS  +D           G++L+ +    D +  
Sbjct: 129 GTPVRWIAQPYERLGTVAVSPCGRWLAFSLMRDLWWRRGPNPYGGAELWLVSNAPDADDF 188

Query: 427 NETLINTPAYASDPQWVG 444
            + L + P     P W  
Sbjct: 189 FQ-LSDAPGMNYCPMWSP 205



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 82/211 (38%), Gaps = 9/211 (4%)

Query: 218 RFSPNQQKVAYATYD--DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             SP+ +KVA+        D         +      RI +         +S + +R +  
Sbjct: 302 ALSPDGKKVAFTVRGKIFADFAEKETERDQRHGPAYRISHTAFRDSDIAWSPDSRRLVYV 361

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +    ++Y  D  + +  RLT       +  +SPD   I + S   G +++ +++ + 
Sbjct: 362 SDRHGDEEVYCYDFLARSETRLTFGAKRKSAPCFSPDGRWIAYAS---GDDEIRLIEVSS 418

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQA 394
            + +   +          WSP    +AF       F  + V   +  Q   +   SNLQA
Sbjct: 419 GEDRPFIRAYFVFGASFAWSPDSRWLAFCAQDERFFSNVYVQHIEEEQAHQISFLSNLQA 478

Query: 395 --PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             P WSP GR L+F+  +     S++  IDL
Sbjct: 479 AGPLWSPDGRFLVFTTGQY-RAESQIARIDL 508



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 74/246 (30%), Gaps = 62/246 (25%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV- 276
            +SP+ + +A+   D+     VY+     ++A +           P +S +G+  + +  
Sbjct: 436 AWSPDSRWLAFCAQDERFFSNVYVQHIEEEQAHQISFLSNLQAAGPLWSPDGRFLVFTTG 495

Query: 277 QKDEAMDIYSVDLQSNAT-------ERL------------------------TNTLFINI 305
           Q      I  +DLQ           ERL                        T +   + 
Sbjct: 496 QYRAESQIARIDLQPQPPVFRETEFERLFELHKSDCRDKQTAGPPSTVGPPHTRSADADR 555

Query: 306 S------ASYSPDSSQIVFESDREGKEQ--------------LYVMQSNGSDQKRISQDK 345
                      PD      ESDR  ++               + ++ +    + R+    
Sbjct: 556 EPQPMVVPVIEPDD-----ESDRAARQHNAPSRLSRSTSPSEITIVFNGIERRLRLLTPP 610

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD----GSQERLLVEDSNLQAPT-WSPS 400
           +        SP G  +  +     +  +  +  D    G   R L      ++   ++P 
Sbjct: 611 QMDAIALCISPDGRDLVCSATIAGRQNLWTLPLDEPRAGQGPRQLTSTPGTKSCACFTPD 670

Query: 401 GRSLIF 406
           G+ + F
Sbjct: 671 GKQIYF 676



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 111/361 (30%), Gaps = 76/361 (21%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNS----RILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           R   H  +  I  +   +     S    R+++VS+      +     +     A      
Sbjct: 329 RDQRHGPAYRISHTAFRDSDIAWSPDSRRLVYVSDRHGDEEVYCYDFL-----ARSETRL 383

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               +    P FSP+ + +AYA+ D  D +R+  + +  DR   R         A  +S 
Sbjct: 384 TFGAKRKSAPCFSPDGRWIAYASGD--DEIRLIEVSSGEDRPFIRAYFVFGASFA--WSP 439

Query: 268 NGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFE------ 319
           + +      Q +    ++Y   ++     +++    +      +SPD   +VF       
Sbjct: 440 DSRWLAFCAQDERFFSNVYVQHIEEEQAHQISFLSNLQAAGPLWSPDGRFLVFTTGQYRA 499

Query: 320 -----------------------------SD-RE----------GKEQLYVMQSNGSDQK 339
                                        SD R+          G        ++   Q 
Sbjct: 500 ESQIARIDLQPQPPVFRETEFERLFELHKSDCRDKQTAGPPSTVGPPHTRSADADREPQP 559

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM-KKDGSQERLLVEDS-NLQAPTW 397
            +    E        + Q +  +    S     I ++      + RLL     +  A   
Sbjct: 560 MVVPVIEPDDESDRAARQHNAPSRLSRSTSPSEITIVFNGIERRLRLLTPPQMDAIALCI 619

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLN-----GRNETLINTPA------YASDPQWVGFM 446
           SP GR L+ S    G     L+++ L+          L +TP       +  D + + F+
Sbjct: 620 SPDGRDLVCSATIAGRQ--NLWTLPLDEPRAGQGPRQLTSTPGTKSCACFTPDGKQIYFL 677

Query: 447 D 447
           D
Sbjct: 678 D 678


>gi|116619705|ref|YP_821861.1| peptidase S41 [Candidatus Solibacter usitatus Ellin6076]
 gi|116222867|gb|ABJ81576.1| peptidase S41 [Candidatus Solibacter usitatus Ellin6076]
          Length = 1059

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 85/212 (40%), Gaps = 17/212 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P+ +K+A+  + +     V+    R      R+ +  +      +S + +RA+    +D
Sbjct: 322 APDGRKLAFTVHGE-----VFAGGAREGGGALRMTHTAANETQIAWSPDSRRAVYVSDRD 376

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               +Y+ D  ++A  RLT+      +  +S D   + F  D    +QL V  +     +
Sbjct: 377 GGYRLYAYDFSTSAETRLTSEAGDETAPVWSGDGKLLAFVRD---AKQLCVYDTAAKQVR 433

Query: 340 RISQDK-----EASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLV--EDSN 391
            ++  +       S     WSP    IA+       F  + V+   G + R +    ++N
Sbjct: 434 VLTSGRFPRPPFGSNRFYAWSPDSKWIAYFDIGARGFRNVYVVPVAGGEPRQISFLSNTN 493

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +  WSP G  ++F   +     + +  IDL
Sbjct: 494 GGSVVWSPDGTYILFDTSQR-TENNNIARIDL 524



 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 85/239 (35%), Gaps = 26/239 (10%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
               EP  SPN+ +VA+ +  D                 + + +  +    P +S +G R
Sbjct: 24  PYFTEPSVSPNRAEVAFVSGGD------IWTSPLSGGEARLLVSHPANETRPMYSPDGTR 77

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGKEQL 328
                 +    DIY ++L S A +R+T         ++S D   + F S   D  G   +
Sbjct: 78  LAFVSNRTGNGDIYVLELGSGALKRITFDDSAEQLDAWSRDGKYLYFSSTAQDVAGMNDI 137

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-------------EKFAIGV 375
           Y + + G     +S D+  + F    SP G  +AFT                 ++  I +
Sbjct: 138 YRVSAEGGTPVAVSADRYVNEFFSAPSPDGKSLAFTARGNTSGQWWRHGHSHLDESEIWL 197

Query: 376 MKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
               G    E+L   D     P WS  G  + +   + G     L+   ++G     I 
Sbjct: 198 AAWAGGAKYEKLAAGDFKCLWPMWSADGARVYYMSDQGG--AENLWEKPVHGGTAKEIT 254



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 58/313 (18%), Positives = 111/313 (35%), Gaps = 38/313 (12%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           DD  + +  +    + + L+ S +       N +  +  +G     ++  R    F    
Sbjct: 106 DDSAEQL--DAWSRDGKYLYFSSTAQDVAGMNDIYRVSAEGGTPVAVSADRYVNEFFSAP 163

Query: 220 SPNQQKVAYAT------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           SP+ + +A+              +   D   ++L         +++       L P +S+
Sbjct: 164 SPDGKSLAFTARGNTSGQWWRHGHSHLDESEIWLAAWAGGAKYEKLAAGDFKCLWPMWSA 223

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKE 326
           +G R      +  A +++   +     + +T       +  S S D   IVFE D     
Sbjct: 224 DGARVYYMSDQGGAENLWEKPVHGGTAKEITQFHDGRLLWPSISYDGKTIVFERD----F 279

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDP--------------VWSPQGDLIAFTKFSGEKFA 372
            ++ + +       I   +  +   P              V +P G  +AFT   GE FA
Sbjct: 280 SVWKLDTATGKAAPIEITRRGAPGTPEVTHLSFNNQFRDLVLAPDGRKLAFT-VHGEVFA 338

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            G  +      R+    +N     WSP  R  ++   +DG  G +LY+ D +   ET + 
Sbjct: 339 GGAREGG-GALRMTHTAANETQIAWSPDSRRAVYVSDRDG--GYRLYAYDFSTSAETRLT 395

Query: 433 T-PAYASDPQWVG 444
           +     + P W G
Sbjct: 396 SEAGDETAPVWSG 408



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 87/257 (33%), Gaps = 22/257 (8%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F    +  + + V+ +    +      G   R L  S       P +SP+  ++A+ + 
Sbjct: 25  YFTEPSVSPNRAEVAFVSGGDIWTSPLSGGEARLLV-SHPANETRPMYSPDGTRLAFVSN 83

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVD 288
              +   +Y+++       KRI    S      +S +GK    S          DIY V 
Sbjct: 84  RTGNG-DIYVLELGSGAL-KRITFDDSAEQLDAWSRDGKYLYFSSTAQDVAGMNDIYRVS 141

Query: 289 LQSNATERLTNTLFINISAS-YSPDSSQIVFESD--------REGKEQ-----LYVMQSN 334
            +      ++   ++N   S  SPD   + F +         R G        +++    
Sbjct: 142 AEGGTPVAVSADRYVNEFFSAPSPDGKSLAFTARGNTSGQWWRHGHSHLDESEIWLAAWA 201

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNL 392
           G  +       +     P+WS  G  + +    G    +      G   + +    D  L
Sbjct: 202 GGAKYEKLAAGDFKCLWPMWSADGARVYYMSDQGGAENLWEKPVHGGTAKEITQFHDGRL 261

Query: 393 QAPTWSPSGRSLIFSRK 409
             P+ S  G++++F R 
Sbjct: 262 LWPSISYDGKTIVFERD 278



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 98/275 (35%), Gaps = 20/275 (7%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLCVMDRDGANIRYLT 207
             +R  A+  S      +T E GD  + +      +++ +     LCV D     +R LT
Sbjct: 377 GGYRLYAYDFSTSAETRLTSEAGDETAPVWSGDGKLLAFVRDAKQLCVYDTAAKQVRVLT 436

Query: 208 PSRD-----QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             R             +SP+ + +AY          VY++        +      +   +
Sbjct: 437 SGRFPRPPFGSNRFYAWSPDSKWIAYFDIGARGFRNVYVVPVAGGEPRQISFLSNTNGGS 496

Query: 263 PRFSSNGKRALI-SVQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVF 318
             +S +G   L  + Q+ E  +I  +DL   A    E     LF + S +   ++++   
Sbjct: 497 VVWSPDGTYILFDTSQRTENNNIARIDLILKAPPFREDRFRDLFRDPSPTRGAEAARPA- 555

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +++R   + + ++      + R+S  +          SP G L+  T  +  +       
Sbjct: 556 QAERAPAKPVQIVFE--GIRNRLSMLQTGLDARIHQISPDGKLLLLTASAARQQNFYTWS 613

Query: 378 KDG------SQERLLVEDSNLQAPTWSPSGRSLIF 406
            D         +++    S      +SP G+ + +
Sbjct: 614 LDELATEPPVAKQVTSTASIKTGGQFSPDGKEIYY 648


>gi|197122051|ref|YP_002134002.1| amidohydrolase [Anaeromyxobacter sp. K]
 gi|196171900|gb|ACG72873.1| amidohydrolase [Anaeromyxobacter sp. K]
          Length = 1042

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 95/262 (36%), Gaps = 35/262 (13%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            +     P R   +  P  SP+  +V +   +        L    +  AP+ +       
Sbjct: 310 FDFDRTAPRRALGIVAPALSPDGTRVVFQALNR-------LWLMDVGGAPRPLTEGPYYA 362

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
             P +S +G R   +  K    D+Y +D+ + A +R+T+     ++ ++SPD  ++ F+ 
Sbjct: 363 QDPAWSRDGTRLAYASDKGGTADLYVLDVVTGAEQRVTSLPGAEVAPAWSPDGGRLAFQ- 421

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFSGEKFAI 373
           D+ G     V+       +++     A    P WS  G  +A         +F      I
Sbjct: 422 DQAGATH--VLDLATGAVRQVVAPLFAP-GRPSWSADGRTLALAALKPYTRRFREGTSQI 478

Query: 374 GVMKKDGSQERL-------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             +  +    R         +       P WSP G +L F  +    +   +  +D +GR
Sbjct: 479 LTVDVESGATRYQEAAPFESLSTRGDDGPVWSPDGTALAFVMQ----STLWVMPVDASGR 534

Query: 427 NE----TLINTPAYASDPQWVG 444
                  + + P  A  P W G
Sbjct: 535 AAGPAVRITSEPTDA--PTWSG 554



 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 43/192 (22%), Positives = 74/192 (38%), Gaps = 12/192 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +        D+  V     R     +R+ +       P +S  G          
Sbjct: 51  SPDGRDLVL------DLQGVLWSLPRGGGEARRLTDGLLEPARPDYSPRGDLVAFQAYAG 104

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNGSD 337
               I+++        +LT+    +    +SPD ++I F SDR  +G   ++V       
Sbjct: 105 GTFHIWTMRPDGTEVRQLTSGHGDDREPRFSPDGTRIAFSSDRAFQGSYDVWVADVATGA 164

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV--EDSNLQA 394
             R   +  A  F+P W+P G  IAF   +G    AI  +   G++  L      + L +
Sbjct: 165 LTR-WTEASADEFEPAWTPDGGEIAFVSGAGSTGTAIEAVDAAGTRRTLATAPAGARLNS 223

Query: 395 PTWSPSGRSLIF 406
           P+ SP G  L +
Sbjct: 224 PSISPDGAHLAW 235



 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 57/237 (24%), Positives = 94/237 (39%), Gaps = 31/237 (13%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N L +MD  GA              +P +S +  ++AYA+ D      +Y++D  +  A 
Sbjct: 341 NRLWLMDVGGA--PRPLTEGPYYAQDPAWSRDGTRLAYAS-DKGGTADLYVLDV-VTGAE 396

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +R+ +     +AP +S +G R      +D+A   + +DL + A  ++   LF     S+S
Sbjct: 397 QRVTSLPGAEVAPAWSPDGGRLAF---QDQAGATHVLDLATGAVRQVVAPLFAPGRPSWS 453

Query: 311 PDSSQIVFES-------DREGKEQLYVMQSNGSDQK-----RISQDKEASYFDPVWSPQG 358
            D   +   +        REG  Q+  +       +                 PVWSP G
Sbjct: 454 ADGRTLALAALKPYTRRFREGTSQILTVDVESGATRYQEAAPFESLSTRGDDGPVWSPDG 513

Query: 359 DLIAFTKFSGEKFAIGVMKKD------GSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             +AF   S     + VM  D      G   R+  E ++  APTWS   R L++   
Sbjct: 514 TALAFVMQS----TLWVMPVDASGRAAGPAVRITSEPTD--APTWSGDSRRLLYLSS 564



 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 59/339 (17%), Positives = 104/339 (30%), Gaps = 68/339 (20%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +   + D++ R   V+    +G     +  M  DG  +R LT        EPRFSP+  +
Sbjct: 83  LEPARPDYSPRGDLVAFQAYAGGT-FHIWTMRPDGTEVRQLTSGHGD-DREPRFSPDGTR 140

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDI 284
           +A+++           +      A  R     +    P ++ +G      S        I
Sbjct: 141 IAFSSDRAFQGSYDVWVADVATGALTRWTEASADEFEPAWTPDGGEIAFVSGAGSTGTAI 200

Query: 285 YSVDLQSNATERLTNTLFINI-SASYSPDSSQIV---FESDR-----EGKE--------- 326
            +VD         T      + S S SPD + +    F ++R     +G           
Sbjct: 201 EAVDAAGTRRTLATAPAGARLNSPSISPDGAHLAWIQFAANRSRLVVDGAPASPFEDVFP 260

Query: 327 -----------------QLYVMQSNGSDQKRISQDKEASYFDPVW--------------- 354
                             + V   +    ++++         P W               
Sbjct: 261 FPAHWLSARTLLYTADGGIRVTDLDAGTSEQVAFQATFRLVRPAWERKRFDFDRTAPRRA 320

Query: 355 --------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                   SP G  + F   +     + +M   G+   L       Q P WS  G  L +
Sbjct: 321 LGIVAPALSPDGTRVVFQALN----RLWLMDVGGAPRPLTEGPYYAQDPAWSRDGTRLAY 376

Query: 407 SRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQWVG 444
           +  K G   + LY +D + G  + + + P     P W  
Sbjct: 377 ASDKGGT--ADLYVLDVVTGAEQRVTSLPGAEVAPAWSP 413



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 7/154 (4%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           A   +T     N++ + SPD   +V   D +G   L+ +   G + +R++ D       P
Sbjct: 34  AVRDVTVHEGTNVAVTASPDGRDLVL--DLQGV--LWSLPRGGGEARRLT-DGLLEPARP 88

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
            +SP+GDL+AF  ++G  F I  M+ DG++ R L     + + P +SP G  + FS  + 
Sbjct: 89  DYSPRGDLVAFQAYAGGTFHIWTMRPDGTEVRQLTSGHGDDREPRFSPDGTRIAFSSDRA 148

Query: 412 GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                 ++  D+  G         A   +P W  
Sbjct: 149 FQGSYDVWVADVATGALTRWTEASADEFEPAWTP 182


>gi|284116166|ref|ZP_06386712.1| WD40 domain protein beta Propeller [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283829532|gb|EFC33886.1| WD40 domain protein beta Propeller [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 312

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 11/177 (6%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---KEQ 327
           + + + ++D   +IY ++   +   RLTN    +    +SP   +++F SDR+       
Sbjct: 6   KVVFTSERDGNREIYMMNPDGSDQVRLTNHRADDTFPVWSPTGERVLFASDRDRFTLSRD 65

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLL 386
           LY+M  +G + +R+   K        WSP G  IA+++       I +   DG  +ER+ 
Sbjct: 66  LYLMDPDGKNVRRV-FGKSEDRSAATWSPDGKQIAYSRRELNGAYIYIGTIDGKKEERMA 124

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           + D    +P WSP G  + F    +     ++  +D+  + + ++  P  A  P W+
Sbjct: 125 IGDG---SPAWSPDGTQIAFLSGFENKQV-RINILDVRTKKQKVL-FPREAK-PSWI 175



 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 66/272 (24%), Positives = 116/272 (42%), Gaps = 23/272 (8%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           +++F SE   +      + +M+ DG++   LT  R    F P +SP  ++V +A+  D  
Sbjct: 6   KVVFTSERDGN----REIYMMNPDGSDQVRLTNHRADDTF-PVWSPTGERVLFASDRDRF 60

Query: 236 ILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            L   L     D    +R+        A  +S +GK+   S ++     IY   +     
Sbjct: 61  TLSRDLYLMDPDGKNVRRVFGKSEDRSAATWSPDGKQIAYSRRELNGAYIYIGTIDGKKE 120

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQD---KEASYF 350
           ER+      + S ++SPD +QI F S  E K+ ++ ++      QK +            
Sbjct: 121 ERMAIG---DGSPAWSPDGTQIAFLSGFENKQVRINILDVRTKKQKVLFPREAKPSWING 177

Query: 351 DPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVEDS--NLQAPTWSPSGR 402
           D VWS   D +AF+   G K        +  +  DG+  + +  D+     +P WSP G 
Sbjct: 178 DLVWSLTTDQLAFSWNPGAKKENVDMETLYTLNSDGTGLKRITSDAAPRETSPVWSPQGD 237

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR-NETLINT 433
           +L++  K D     +++ I L    +E L +T
Sbjct: 238 ALLYD-KVDKHNRLQIFKIALGSDISEQLTDT 268



 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/145 (28%), Positives = 77/145 (53%), Gaps = 11/145 (7%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P ++++VF S+R+G  ++Y+M  +GSDQ R++ +  A    PVWSP G+ + F      
Sbjct: 1   MPTTAKVVFTSERDGNREIYMMNPDGSDQVRLT-NHRADDTFPVWSPTGERVLFASDRDR 59

Query: 370 ---KFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                 + +M  DG   R +  +  +  A TWSP G+ + +SR++    G+ +Y   ++G
Sbjct: 60  FTLSRDLYLMDPDGKNVRRVFGKSEDRSAATWSPDGKQIAYSRRELN--GAYIYIGTIDG 117

Query: 426 RNETLI----NTPAYASDPQWVGFM 446
           + E  +     +PA++ D   + F+
Sbjct: 118 KKEERMAIGDGSPAWSPDGTQIAFL 142



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 13/88 (14%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +L  ++ DG  ++ +T         P +SP    + Y   D  + L+++ +    D + +
Sbjct: 205 TLYTLNSDGTGLKRITSDAAPRETSPVWSPQGDALLYDKVDKHNRLQIFKIALGSDISEQ 264

Query: 252 RI-------------GNFRSMILAPRFS 266
                           N       P F+
Sbjct: 265 LTDTFIPKVFGKFFQANSPGDWFDPAFA 292


>gi|225010671|ref|ZP_03701141.1| amidohydrolase [Flavobacteria bacterium MS024-3C]
 gi|225005224|gb|EEG43176.1| amidohydrolase [Flavobacteria bacterium MS024-3C]
          Length = 1167

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 92/209 (44%), Gaps = 23/209 (11%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
              +    +   S +G+  +  +  D    +Y++ +       +T+ L   +   +SPD 
Sbjct: 52  TTEKGTWTSLDVSPDGQTIVFDLMGD----LYTMPISGGNATAITHGLAYEVHPRFSPDG 107

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             + + SD+ G + +++M  +  +  +IS++++ ++F   WSP GD +   K       +
Sbjct: 108 KSLAYISDKSGSDNIWLMDLSSKEDTQISKEQKNNFFSVAWSPDGDYLVGAKGR-RNIKL 166

Query: 374 GVMKKDGSQERLLVEDS---NLQAPTWSPSGRSLIFSRKKDG-DTGSKL-------YSID 422
            +  KDG     L+ +        P +   G++L FS++    +  ++L       YS++
Sbjct: 167 HLYHKDGGGGAPLISEPKGLKAIDPFFGADGKTLYFSQRNGAWNYNAQLPQYQVGTYSME 226

Query: 423 LNGRNETLIN------TPAYASDPQWVGF 445
            +G  + + +      TP  + D +W+ +
Sbjct: 227 -DGATDVITSRYGSAFTPTLSKDGKWLVY 254



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 51/228 (22%), Positives = 91/228 (39%), Gaps = 20/228 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ Q + +    D   + +             I +  +  + PRFS +GK       K 
Sbjct: 64  SPDGQTIVFDLMGDLYTMPI------SGGNATAITHGLAYEVHPRFSPDGKSLAYISDKS 117

Query: 280 EAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIV-FESDREGKEQLYVMQSNGSD 337
            + +I+ +DL S    +++     N  S ++SPD   +V  +  R  K  LY     G  
Sbjct: 118 GSDNIWLMDLSSKEDTQISKEQKNNFFSVAWSPDGDYLVGAKGRRNIKLHLYHKD-GGGG 176

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------KFAIGVMKK-DGSQERLLVE 388
              IS+ K     DP +   G  + F++ +G         ++ +G     DG+ + +   
Sbjct: 177 APLISEPKGLKAIDPFFGADGKTLYFSQRNGAWNYNAQLPQYQVGTYSMEDGATDVITSR 236

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             +   PT S  G+ L++  + +  TG  L   DLN   E+ +  P  
Sbjct: 237 YGSAFTPTLSKDGKWLVYGTRFEDQTG--LILRDLNTGEESWLAYPVQ 282



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 87/299 (29%), Gaps = 42/299 (14%)

Query: 184 VVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
              G     L +  +DG      ++  +     +P F  + + + ++  +        L 
Sbjct: 157 GAKGRRNIKLHLYHKDGGGGAPLISEPKGLKAIDPFFGADGKTLYFSQRNGAWNYNAQLP 216

Query: 243 DTRIDRA------PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             ++            I +       P  S +GK  +   + ++   +   DL +     
Sbjct: 217 QYQVGTYSMEDGATDVITSRYGSAFTPTLSKDGKWLVYGTRFEDQTGLILRDLNTGEESW 276

Query: 297 LTNTLFINISASYSPDSSQIV--FE-------------------SDREGKEQLYVMQSNG 335
           L   +  +   S +P        F                    SD+   +  Y      
Sbjct: 277 LAYPVQRDEQESIAPLGVLPAMSFTPDSNALIVSYGGDIHRITLSDKTASKIPYTASVAL 336

Query: 336 SDQKRISQDKEASYFDPVW---------SPQGDLIAFTKFSGEKFAIGVMK-KDGSQERL 385
               ++      S  D            SP G  +AFT  +     + VM   +G+ +R+
Sbjct: 337 ELGPQLDFKYPISDADTAMASQIRDAKPSPDGKRLAFTALN----RLYVMDLPNGTPKRV 392

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              D     P WSP G  ++F+     +       +        L  T    + P+W  
Sbjct: 393 TTHDFTEAQPAWSPDGSQIVFTTWNGSEGHLYKARMGRRTAVVKLTQTTGIYTQPRWSY 451



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 50/298 (16%), Positives = 98/298 (32%), Gaps = 38/298 (12%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           + T EKG + S  +      +   +   L  M   G N   +T         PRFSP+ +
Sbjct: 50  AFTTEKGTWTSLDVSPDGQTIVFDLMGDLYTMPISGGNATAITHGL-AYEVHPRFSPDGK 108

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +AY + D      ++LMD       +     ++   +  +S +G   +   +    + +
Sbjct: 109 SLAYIS-DKSGSDNIWLMDLSSKEDTQISKEQKNNFFSVAWSPDGDYLV-GAKGRRNIKL 166

Query: 285 YSVDLQSNATERLTNTL----FINISASYSPDSSQIVFESDREG---------KEQLYVM 331
           +           L +       I+    +  D   + F S R G         + Q+   
Sbjct: 167 HLYHKDGGGGAPLISEPKGLKAID--PFFGADGKTLYF-SQRNGAWNYNAQLPQYQVGTY 223

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-- 389
                    I+  +  S F P  S  G  + +     ++  + +   +  +E  L     
Sbjct: 224 SMEDGATDVITS-RYGSAFTPTLSKDGKWLVYGTRFEDQTGLILRDLNTGEESWLAYPVQ 282

Query: 390 ----------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                       L A +++P   +LI S       G  ++ I L+ +  + I   A  
Sbjct: 283 RDEQESIAPLGVLPAMSFTPDSNALIVSY------GGDIHRITLSDKTASKIPYTASV 334



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 65/178 (36%), Gaps = 24/178 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +GKR   +        +Y +DL +   +R+T   F     ++SPD SQIVF +    +
Sbjct: 365 SPDGKRLAFTA----LNRLYVMDLPNGTPKRVTTHDFTEAQPAWSPDGSQIVFTTWNGSE 420

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV---------- 375
             LY  +                Y  P WS   D I F   S + +   +          
Sbjct: 421 GHLYKARMGRRTAVVKLTQTTGIYTQPRWSYAKDRIVFLAGSNQVYKDAIGPMASNATED 480

Query: 376 ---MKKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              +   G   +L+ +    + P ++    R  ++S  K       L SI  +G +E 
Sbjct: 481 LVWISGQGGSNQLIAKSKGREMPHFTKVDNRIYLYSGSKG------LVSIRWDGSDEK 532



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 58/160 (36%), Gaps = 24/160 (15%)

Query: 191 NSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           N L VMD  +G   R  T   D    +P +SP+  ++ + T+ +     +Y        A
Sbjct: 377 NRLYVMDLPNGTPKRVTTH--DFTEAQPAWSPDGSQIVFTTW-NGSEGHLYKARMGRRTA 433

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             ++     +   PR+S    R +     ++        + SNATE L            
Sbjct: 434 VVKLTQTTGIYTQPRWSYAKDRIVFLAGSNQVYKDAIGPMASNATEDL------------ 481

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                  V+ S + G  QL + +S G +    ++     Y
Sbjct: 482 -------VWISGQGGSNQL-IAKSKGREMPHFTKVDNRIY 513


>gi|220916821|ref|YP_002492125.1| amidohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954675|gb|ACL65059.1| amidohydrolase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 1040

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 95/262 (36%), Gaps = 35/262 (13%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            +     P R   +  P  SP+  +V +   +        L    +  AP+ +       
Sbjct: 310 FDFDRTAPRRALGIVAPALSPDGTRVVFQALNR-------LWLMDVGGAPRPLTEGPYYA 362

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
             P +S +G R   +  K    D+Y +D+ + A +R+T+     ++ ++SPD  ++ F+ 
Sbjct: 363 QDPAWSRDGTRIAYASDKGGTADLYVLDVVTGAEQRVTSLPGAEVAPAWSPDGGRLAFQ- 421

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFSGEKFAI 373
           D+ G     V+       +++     A    P WS  G  +A         +F      I
Sbjct: 422 DQAGATH--VLDLATGAVRQVVAPLFAP-GRPTWSADGRTLALAALKPYTRRFREGTSQI 478

Query: 374 GVMKKDGSQERL-------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             +  +    R         +       P WSP G +L F  +    +   +  +D +GR
Sbjct: 479 LTVDVESGATRYQEAAPFESLSTRGDDGPVWSPDGTALAFVMQ----STLWVMPVDASGR 534

Query: 427 NE----TLINTPAYASDPQWVG 444
                  + + P  A  P W G
Sbjct: 535 AAGPAVRITSEPTDA--PTWSG 554



 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 58/339 (17%), Positives = 104/339 (30%), Gaps = 68/339 (20%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +   + D++ R   V+    +G     +  M  DG ++R LT        EPRFSP+  +
Sbjct: 83  LEPARPDYSPRGDLVAFQAYAGGT-FHIWTMRPDGTDVRQLTSGHGD-DREPRFSPDGTR 140

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDI 284
           +A+++           +      A  R     +    P ++ +G      S        I
Sbjct: 141 IAFSSDRAFQGSYDVWVADVATGALTRWTEAPADEFEPAWTPDGGEIAFVSGAGSTGTAI 200

Query: 285 YSVDLQSNATERLTNTLFIN-ISASYSPDSSQIV---FESDR-----EGKE--------- 326
            +VD         T        S S SPD + +    F ++R     +G           
Sbjct: 201 EAVDAAGTRRTLATAPAGARLSSPSISPDGAHLAWIQFAANRSRLVVDGAPASPFEDVFP 260

Query: 327 -----------------QLYVMQSNGSDQKRISQDKEASYFDPVW--------------- 354
                             + V   +    ++++         P W               
Sbjct: 261 FPAHWLSPRTLLYTADGGIRVTDLDAGTSEQVAFQATFRLVRPAWERKRFDFDRTAPRRA 320

Query: 355 --------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                   SP G  + F   +     + +M   G+   L       Q P WS  G  + +
Sbjct: 321 LGIVAPALSPDGTRVVFQALN----RLWLMDVGGAPRPLTEGPYYAQDPAWSRDGTRIAY 376

Query: 407 SRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQWVG 444
           +  K G   + LY +D + G  + + + P     P W  
Sbjct: 377 ASDKGGT--ADLYVLDVVTGAEQRVTSLPGAEVAPAWSP 413



 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 56/237 (23%), Positives = 94/237 (39%), Gaps = 31/237 (13%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N L +MD  GA              +P +S +  ++AYA+ D      +Y++D  +  A 
Sbjct: 341 NRLWLMDVGGA--PRPLTEGPYYAQDPAWSRDGTRIAYAS-DKGGTADLYVLDV-VTGAE 396

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +R+ +     +AP +S +G R      +D+A   + +DL + A  ++   LF     ++S
Sbjct: 397 QRVTSLPGAEVAPAWSPDGGRLAF---QDQAGATHVLDLATGAVRQVVAPLFAPGRPTWS 453

Query: 311 PDSSQIVFES-------DREGKEQLYVMQSNGSDQK-----RISQDKEASYFDPVWSPQG 358
            D   +   +        REG  Q+  +       +                 PVWSP G
Sbjct: 454 ADGRTLALAALKPYTRRFREGTSQILTVDVESGATRYQEAAPFESLSTRGDDGPVWSPDG 513

Query: 359 DLIAFTKFSGEKFAIGVMKKD------GSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             +AF   S     + VM  D      G   R+  E ++  APTWS   R L++   
Sbjct: 514 TALAFVMQS----TLWVMPVDASGRAAGPAVRITSEPTD--APTWSGDSRRLLYLSS 564



 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 43/192 (22%), Positives = 74/192 (38%), Gaps = 12/192 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +        D+  V     R     +R+ +       P +S  G          
Sbjct: 51  SPDGRDLVL------DLQGVLWSLPRGGGEARRLTDGLLEPARPDYSPRGDLVAFQAYAG 104

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNGSD 337
               I+++        +LT+    +    +SPD ++I F SDR  +G   ++V       
Sbjct: 105 GTFHIWTMRPDGTDVRQLTSGHGDDREPRFSPDGTRIAFSSDRAFQGSYDVWVADVATGA 164

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV--EDSNLQA 394
             R   +  A  F+P W+P G  IAF   +G    AI  +   G++  L      + L +
Sbjct: 165 LTR-WTEAPADEFEPAWTPDGGEIAFVSGAGSTGTAIEAVDAAGTRRTLATAPAGARLSS 223

Query: 395 PTWSPSGRSLIF 406
           P+ SP G  L +
Sbjct: 224 PSISPDGAHLAW 235



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 69/154 (44%), Gaps = 7/154 (4%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           A   +T     N++ + SPD   +V   D +G   L+ +   G + +R++ D       P
Sbjct: 34  AVRDITVHEGTNVAVTASPDGRDLVL--DLQGV--LWSLPRGGGEARRLT-DGLLEPARP 88

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
            +SP+GDL+AF  ++G  F I  M+ DG+  R L     + + P +SP G  + FS  + 
Sbjct: 89  DYSPRGDLVAFQAYAGGTFHIWTMRPDGTDVRQLTSGHGDDREPRFSPDGTRIAFSSDRA 148

Query: 412 GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                 ++  D+  G        PA   +P W  
Sbjct: 149 FQGSYDVWVADVATGALTRWTEAPADEFEPAWTP 182


>gi|254517195|ref|ZP_05129252.1| X-Pro dipeptidyl-peptidase, S15 family [gamma proteobacterium
           NOR5-3]
 gi|219674033|gb|EED30402.1| X-Pro dipeptidyl-peptidase, S15 family [gamma proteobacterium
           NOR5-3]
          Length = 654

 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 54/306 (17%), Positives = 109/306 (35%), Gaps = 56/306 (18%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  + +   DG     +T S D     PR+SP+ + +++     ED         R+
Sbjct: 51  DKSRTQIWMAPTDGGEAIPMT-SVDSSASRPRWSPDNKYLSFTASRGEDAKTQVWSLNRL 109

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISV-----------QKDEAMDIYSVD------- 288
                ++ N +  +    +S +G R L+++           + D+    + +D       
Sbjct: 110 GGDAMQVTNVKQGVSDFAWSPDGSRLLLTIKDARPADLTEDEDDDKPRPHVIDRIQFKQD 169

Query: 289 ----------------LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------ 326
                              +A  ++T   + +    +SPD   + F SDR          
Sbjct: 170 YQGYIDRRRKHFYVYTPGDDAPVQITFGDYDDEDPVWSPDGKSVAFVSDRSENPDLYYGS 229

Query: 327 QLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---------AIGVM 376
            ++V+  +  + + +           P WSP G  IA+   +G             + + 
Sbjct: 230 NIWVVAVDDENHRLQKVTADSGKERSPTWSPDGQSIAYISSTGPDVGGSALTPTRRLALT 289

Query: 377 KKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL-INT 433
           + DG   ++L    D NL  P ++  GR + F  + +G     L SI ++G++    +  
Sbjct: 290 RVDGGARQILTPDLDRNLSDPQFTDDGRRISFRLEDEGQV--HLASIGVDGQSFRRDLEG 347

Query: 434 PAYASD 439
           P    D
Sbjct: 348 PVTVRD 353



 Score =  113 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 103/288 (35%), Gaps = 59/288 (20%)

Query: 212 QILFEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           Q + +P+FSP+ + VAY       +++       M          + +  S    PR+S 
Sbjct: 25  QRVGDPQFSPDGRWVAYTVTQKDLEEDKSRTQIWMAPTDGGEAIPMTSVDSSASRPRWSP 84

Query: 268 NGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-------- 317
           + K    +  +  D    ++S++       ++TN        ++SPD S+++        
Sbjct: 85  DNKYLSFTASRGEDAKTQVWSLNRLGGDAMQVTNVKQGVSDFAWSPDGSRLLLTIKDARP 144

Query: 318 ---------------------FESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFD 351
                                F+ D +G     ++  YV         +I+   +    D
Sbjct: 145 ADLTEDEDDDKPRPHVIDRIQFKQDYQGYIDRRRKHFYVYTPGDDAPVQITF-GDYDDED 203

Query: 352 PVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGR 402
           PVWSP G  +AF     E         I V+  D    RL     +    ++PTWSP G+
Sbjct: 204 PVWSPDGKSVAFVSDRSENPDLYYGSNIWVVAVDDENHRLQKVTADSGKERSPTWSPDGQ 263

Query: 403 SLIFSRKKDGDTGS-------KLYSIDLNGRNETLIN--TPAYASDPQ 441
           S+ +      D G        +L    ++G    ++        SDPQ
Sbjct: 264 SIAYISSTGPDVGGSALTPTRRLALTRVDGGARQILTPDLDRNLSDPQ 311



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 78/236 (33%), Gaps = 53/236 (22%)

Query: 260 ILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           +  P+FS +G+    +V + +         I+           +T+         +SPD+
Sbjct: 27  VGDPQFSPDGRWVAYTVTQKDLEEDKSRTQIWMAPTDGGEAIPMTSVDSSASRPRWSPDN 86

Query: 314 SQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--------- 362
             + F + R  + K Q++ +   G D  +++  K+    D  WSP G  +          
Sbjct: 87  KYLSFTASRGEDAKTQVWSLNRLGGDAMQVTNVKQG-VSDFAWSPDGSRLLLTIKDARPA 145

Query: 363 ---------------------------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                                      +     + F +     D +  ++   D + + P
Sbjct: 146 DLTEDEDDDKPRPHVIDRIQFKQDYQGYIDRRRKHFYVYT-PGDDAPVQITFGDYDDEDP 204

Query: 396 TWSPSGRSLIFSRKKDGDT----GSKLYSIDLNGRNETL---INTPAYASDPQWVG 444
            WSP G+S+ F   +  +     GS ++ + ++  N  L            P W  
Sbjct: 205 VWSPDGKSVAFVSDRSENPDLYYGSNIWVVAVDDENHRLQKVTADSGKERSPTWSP 260



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 54/321 (16%), Positives = 115/321 (35%), Gaps = 62/321 (19%)

Query: 170 KGDFNSRILFVSESVVSGI-IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           +  ++    ++S +   G   K  +  ++R G +   +T  +  +     +SP+  ++  
Sbjct: 79  RPRWSPDNKYLSFTASRGEDAKTQVWSLNRLGGDAMQVTNVKQGVSDF-AWSPDGSRLLL 137

Query: 229 ATYDDEDI--------------------------------LRVYLMDTRIDRAPKRIGNF 256
              D                                     + + + T  D AP +I   
Sbjct: 138 TIKDARPADLTEDEDDDKPRPHVIDRIQFKQDYQGYIDRRRKHFYVYTPGDDAPVQITFG 197

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIY--------SVDLQSNATERLTNTLFINISAS 308
                 P +S +GK       + E  D+Y        +VD +++  +++T       S +
Sbjct: 198 DYDDEDPVWSPDGKSVAFVSDRSENPDLYYGSNIWVVAVDDENHRLQKVTADSGKERSPT 257

Query: 309 YSPDSSQIVFES----DREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +SPD   I + S    D  G       +L + + +G  ++ ++ D + +  DP ++  G 
Sbjct: 258 WSPDGQSIAYISSTGPDVGGSALTPTRRLALTRVDGGARQILTPDLDRNLSDPQFTDDGR 317

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTG 415
            I+F      +  +  +  DG   R      +L+ P      + SG  ++   +   D  
Sbjct: 318 RISFRLEDEGQVHLASIGVDGQSFRR-----DLEGPVTVRDVARSGERIVVLAE-SADQP 371

Query: 416 SKLYSIDLNGRNETLINTPAY 436
           S LY++  +G    L +  A 
Sbjct: 372 SNLYTLS-DGYLSALTSVNAE 391



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 10/81 (12%)

Query: 374 GVMKKDGSQERLLVEDSNL-----QAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLN 424
            V  +  S++RLL  D  +       P +SP GR + ++  +    +  + ++++    +
Sbjct: 4   AVQAQPESEQRLLTIDDLMAIQRVGDPQFSPDGRWVAYTVTQKDLEEDKSRTQIWMAPTD 63

Query: 425 GRNETLINT-PAYASDPQWVG 444
           G     + +  + AS P+W  
Sbjct: 64  GGEAIPMTSVDSSASRPRWSP 84



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 77/216 (35%), Gaps = 29/216 (13%)

Query: 175 SRILFVSESVVSGIIK-----NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
             I ++S +              L +   DG   + LTP  D+ L +P+F+ + +++   
Sbjct: 263 QSIAYISSTGPDVGGSALTPTRRLALTRVDGGARQILTPDLDRNLSDPQFTDDGRRI--- 319

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVD 288
           ++  ED  +V+L    +D    R  +    +     + +G+R ++ +   D+  ++Y+  
Sbjct: 320 SFRLEDEGQVHLASIGVDGQSFR-RDLEGPVTVRDVARSGERIVVLAESADQPSNLYT-- 376

Query: 289 LQSNATERLTNTLFI----NISASY------SPDSSQI-VF----ESDREGKEQLYVMQS 333
           L       LT+                    S D +++  F        EGK    ++  
Sbjct: 377 LSDGYLSALTSVNAELLAGVARPEVEKREFASADGTKVEAFFVKPVGYEEGKRYPTILWL 436

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +G    + S          +++  G  +      G 
Sbjct: 437 HGGPASQFSY--SYRDTAQLFAANGYAVIMPNPRGS 470


>gi|319650056|ref|ZP_08004205.1| YuxL protein [Bacillus sp. 2_A_57_CT2]
 gi|317398237|gb|EFV78926.1| YuxL protein [Bacillus sp. 2_A_57_CT2]
          Length = 661

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 91/263 (34%), Gaps = 54/263 (20%)

Query: 214 LFEPRFSPNQQKVAYATYDDED-----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           + +P+ S N   +A+      D        ++ ++T     P +    +    +PR+S +
Sbjct: 18  VADPQLSLNGNDLAFVETRMLDEENTYSSNIFYLNTIKGNMPVQWTYGKHRNHSPRWSPD 77

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--------- 319
           G        +D    IY +        +LT+         +SPD  +IVF          
Sbjct: 78  GDSIAFVSDRDGKSQIYVMSKAGGEARQLTHCANGASKPVWSPDGKKIVFNLSVKPGEDA 137

Query: 320 ------------------------SDREG-----KEQLYVMQSNGSDQKRISQDKEASYF 350
                                   SD +G       Q+ ++       ++++   E  Y 
Sbjct: 138 ETKENQEKQTDRPLPLEIEKMKHKSDAQGFWSGRYSQVALIDIETGGMEQLTS-GEHDYQ 196

Query: 351 DPVWSPQGDLIAFTK--FSGEKF----AIGVMKKDGSQERLLVED-SNLQAPTWSPSGRS 403
              WSP G  IA T      + F     + ++  +    + +        + TWSP G+ 
Sbjct: 197 LQDWSPDGKWIAVTADLSEDKDFSFLSDVYIIHLETKDMKRITNGKGYFGSATWSPDGKY 256

Query: 404 L-IFS--RKKDGDTGSKLYSIDL 423
           + +F   R+ +  T +K++  +L
Sbjct: 257 IGLFGHEREYENATHTKVWVYNL 279



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 94/291 (32%), Gaps = 70/291 (24%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N+             PR+SP+   +A+ +  D    ++Y+M ++     +++ +  +  
Sbjct: 56  GNMPVQWTYGKHRNHSPRWSPDGDSIAFVSDRDGKS-QIYVM-SKAGGEARQLTHCANGA 113

Query: 261 LAPRFSSNGKRALISVQK--------------------------------------DEAM 282
             P +S +GK+ + ++                                            
Sbjct: 114 SKPVWSPDGKKIVFNLSVKPGEDAETKENQEKQTDRPLPLEIEKMKHKSDAQGFWSGRYS 173

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK------EQLYVMQSNGS 336
            +  +D+++   E+LT+         +SPD   I   +D            +Y++     
Sbjct: 174 QVALIDIETGGMEQLTSGEHDYQLQDWSPDGKWIAVTADLSEDKDFSFLSDVYIIHLETK 233

Query: 337 DQKRISQDKEASYFDPVWSPQGDLI-AFTKFS----GEKFAIGVMKKDGSQERLLVEDSN 391
           D KRI+ + +  +    WSP G  I  F             + V   +    + L  +S+
Sbjct: 234 DMKRIT-NGKGYFGSATWSPDGKYIGLFGHEREYENATHTKVWVYNLEFGNLQCLTAESD 292

Query: 392 LQAPT----------------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           + A                  W+   RS  F     G+T   +Y   L+G 
Sbjct: 293 ILAGDYAIGDFQQGTVTPGILWAEDSRSFYFLATDHGNT--VVYYGSLDGE 341


>gi|239993670|ref|ZP_04714194.1| Acylaminoacyl-peptidase [Alteromonas macleodii ATCC 27126]
          Length = 708

 Score =  128 bits (321), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 51/284 (17%), Positives = 107/284 (37%), Gaps = 36/284 (12%)

Query: 176 RILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            + +V  S    S   + ++ +   DG + R L  S+    +  R+SP+  ++AY + ++
Sbjct: 73  YVAYVRRSNDIMSDSSRANVWLASVDGKSHRPLLSSKKSY-YSIRWSPDGSRLAYLSNEE 131

Query: 234 EDI-LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
               L V  MDT        + +  S I    +S +GK    ++  D         L   
Sbjct: 132 GKPQLYVRWMDTGQTALVTNVTSNPSNI---TWSPDGKHIAFTMSVDAKEK----PLDIK 184

Query: 293 ATERLTNTLFINISASYSPDSSQIV---FESDREG-----KEQLYVMQSNGSDQKRISQD 344
             ++          A +SP    I    +++D  G        ++++ ++G   ++++  
Sbjct: 185 MPKK-------PDGAKWSPSFQYITKARYQADGRGILEPAYTHIFIVPADGGTARQLTSG 237

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFA-------IGVMKKDGSQERLLVEDSNLQAPTW 397
                    +SP  D I F+    + +        I  +   G+  +L  +     +P  
Sbjct: 238 NYHHNGRLSFSPDSDKIYFSANRSDNWEYEPVEGDIFSVDMMGNIAQLTNDKGLESSPVV 297

Query: 398 SPSGRSLIFSRKKDGD---TGSKLYSIDLNGRNETLINTPAYAS 438
           SP G+ + ++R+ D       S LY +  +G +   +      S
Sbjct: 298 SPDGKHIAYARRDDEKVMYKNSYLYVMKSDGTDAKNLTKDVDNS 341



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 77/210 (36%), Gaps = 17/210 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED----ILRVYLMDTRIDR 248
           + ++  DG   R LT           FSP+  K+ ++    ++     +   +    +  
Sbjct: 221 IFIVPADGGTARQLTSGNYHHNGRLSFSPDSDKIYFSANRSDNWEYEPVEGDIFSVDMMG 280

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----AMDIYSVDLQSNATERLTNTLFI 303
              ++ N + +  +P  S +GK    + + DE        +Y +       + LT  +  
Sbjct: 281 NIAQLTNDKGLESSPVVSPDGKHIAYARRDDEKVMYKNSYLYVMKSDGTDAKNLTKDVDN 340

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGD 359
           ++S  +  D+  + F+    G  Q+ V+  +GS +         +   P     +    D
Sbjct: 341 SVSNFHWKDNKHVYFQQSVRGLAQVDVVSLSGSVKAVAKGLGGTTLGRPYVFGTYHAVDD 400

Query: 360 LIAFTK-FSGEKFAIGVMKKDGSQERLLVE 388
           ++A+TK  +     + V       ER L  
Sbjct: 401 VVAYTKGRTDRPADLYV---TTRNERQLTA 427


>gi|298675386|ref|YP_003727136.1| WD40 domain-containing protein beta Propeller [Methanohalobium
           evestigatum Z-7303]
 gi|298288374|gb|ADI74340.1| WD40 domain protein beta Propeller [Methanohalobium evestigatum
           Z-7303]
          Length = 616

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 63/268 (23%), Positives = 114/268 (42%), Gaps = 25/268 (9%)

Query: 191 NSLCVMDRDGANIRYLTPS----------RDQILFEPRFSPNQQKVAYATYD---DEDIL 237
            +L +M+ DG +I+ +              D+++  P +SP+     Y + +   + +IL
Sbjct: 100 RALYIMNADGFDIKRIAWGEYTPYTRKVGNDKLIGLPSWSPDGDVFTYTSEELAKNGNIL 159

Query: 238 RVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNAT 294
             +L+    +      G+F S  +    ++S +G   L    +K E    Y +DL  N T
Sbjct: 160 GEFLIVDADNLNTIEKGSFISNKIDFIKKWSPDGSYLLYRGYKKGEGPKCYLLDLTRNIT 219

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            R   T +     ++SP  ++I F  + +G E  +V   +  + K I   K +S  +P+W
Sbjct: 220 RRFPITQYNPEDITWSPKGNKIAFLGEEKGNESAFVYNLDNGNLKNIFSTKNSSIHNPLW 279

Query: 355 SPQGDLIAFTKFSGEKF-AIGVMK---KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           SP G  +AF+K        + V+     +G   +L      +    W      L+++   
Sbjct: 280 SPDGRKLAFSKIEDNNVKDVYVIDINVVNGRPYKLTTLHGGILV-EWL-DSEKLLYTEYS 337

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYAS 438
             D    LYSI +N RN+TL+      S
Sbjct: 338 PED---NLYSISVNSRNKTLLYNSTNES 362



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 88/235 (37%), Gaps = 34/235 (14%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-------------SVQKDEAMDIYSVDL 289
           DT       R+       +   +S +G RAL+             +  + E   +Y ++ 
Sbjct: 48  DTLELVNKSRLKVDGGPAMYIHWSPDGTRALVLTKLTVHAKNKPEATTRSEIRALYIMNA 107

Query: 290 QSNATERL--------TNTLFIN---ISASYSPDSSQIVFESDREGKE-----QLYVMQS 333
                +R+        T  +  +      S+SPD     + S+   K      +  ++ +
Sbjct: 108 DGFDIKRIAWGEYTPYTRKVGNDKLIGLPSWSPDGDVFTYTSEELAKNGNILGEFLIVDA 167

Query: 334 NGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERL-LVEDS 390
           +  +  ++ S       F   WSP G  + +  +  GE     ++    +  R   +   
Sbjct: 168 DNLNTIEKGSFISNKIDFIKKWSPDGSYLLYRGYKKGEGPKCYLLDLTRNITRRFPITQY 227

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           N +  TWSP G  + F  ++ G+  + +Y++D NG  + + +T  +   +P W  
Sbjct: 228 NPEDITWSPKGNKIAFLGEEKGNESAFVYNLD-NGNLKNIFSTKNSSIHNPLWSP 281


>gi|73669137|ref|YP_305152.1| hypothetical protein Mbar_A1627 [Methanosarcina barkeri str.
           Fusaro]
 gi|72396299|gb|AAZ70572.1| hypothetical protein Mbar_A1627 [Methanosarcina barkeri str.
           Fusaro]
          Length = 615

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 56/264 (21%), Positives = 109/264 (41%), Gaps = 20/264 (7%)

Query: 175 SRILFVSESVVSGII-KNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYD 232
           S+I ++     +    ++ L +M+ +G   + L  +     +    + P   K+ YA   
Sbjct: 97  SKISYIENRYDTAAGPRSDLWIMNSNGEGKKQLLDTIWYRYYYIYTWFPTGSKILYAEIY 156

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS------ 286
           +E     + MD+        IGN   +      S +  +  I       +D Y       
Sbjct: 157 EEIGGSYWEMDSD-GSNKHNIGNM-GIANGIALSPDASKIAICAHGPADVDYYIDVGKVG 214

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVF------ESDREGKEQLYVMQSNGSDQKR 340
            DL S     +T+      S  ++PD S+IV+          +   ++Y+++++G+ + +
Sbjct: 215 KDLTSFRYGLITHQTQSRQSQIWAPDGSKIVYYAGKNESYYEDENSEIYIVKADGTGRIQ 274

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
           ++ D  A+   PV+SP G  I F         I +M  DG  +  L  D ++   P WSP
Sbjct: 275 LTSDS-ANDNSPVFSPDGSKIVFVSDKAGNEDIWIMDADGKNKVQLTSDPASDSFPVWSP 333

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL 423
            G+ + F   + G   + +Y++ L
Sbjct: 334 DGKKIAFWSNRGG--NNNIYTLTL 355



 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 109/279 (39%), Gaps = 27/279 (9%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDD----EDILRVYLM 242
             +N L  +  DG     LT ++      +  +SP+  K++Y              +++M
Sbjct: 60  SRENGLYKVFSDGTGEMKLTSTKGKNFTSDYAWSPDGSKISYIENRYDTAAGPRSDLWIM 119

Query: 243 DTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNT 300
           ++  +   + +   +        +   G + L +   +E     + +D   +    + N 
Sbjct: 120 NSNGEGKKQLLDTIWYRYYYIYTWFPTGSKILYAEIYEEIGGSYWEMDSDGSNKHNIGN- 178

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-------SYFDPV 353
           + I    + SPD+S+I   +        Y+    G   K ++  +         S    +
Sbjct: 179 MGIANGIALSPDASKIAICAHGPADVDYYI--DVGKVGKDLTSFRYGLITHQTQSRQSQI 236

Query: 354 WSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIF 406
           W+P G  I +      + +  E   I ++K DG+    L  DS N  +P +SP G  ++F
Sbjct: 237 WAPDGSKIVYYAGKNESYYEDENSEIYIVKADGTGRIQLTSDSANDNSPVFSPDGSKIVF 296

Query: 407 SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
              K G     ++ +D +G+N+  L + PA  S P W  
Sbjct: 297 VSDKAG--NEDIWIMDADGKNKVQLTSDPASDSFPVWSP 333



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 90/246 (36%), Gaps = 32/246 (13%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRFSPNQQKVAYA--- 229
            S+I   +           +  + +D  + RY L   + Q      ++P+  K+ Y    
Sbjct: 191 ASKIAICAHGPADVDYYIDVGKVGKDLTSFRYGLITHQTQSRQSQIWAPDGSKIVYYAGK 250

Query: 230 --TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             +Y +++   +Y++        + + +  +   +P FS +G + +    K    DI+ +
Sbjct: 251 NESYYEDENSEIYIVKADGTGRIQ-LTSDSANDNSPVFSPDGSKIVFVSDKAGNEDIWIM 309

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-------------- 333
           D       +LT+    +    +SPD  +I F S+R G   +Y +                
Sbjct: 310 DADGKNKVQLTSDPASDSFPVWSPDGKKIAFWSNRGGNNNIYTLTLENEKTPVAAFCASQ 369

Query: 334 -NGSDQKRISQDKEASYFDPVWSP---QGDLI-------AFTKFSGEKFAIGVMKKDGSQ 382
            +G+   ++S   +++     WS     G           ++K      ++ V    G+ 
Sbjct: 370 TSGNAPLKVSFTDKSTGTPTSWSWSFGDGKTSTLKNPLHIYSKAGKYTVSLTVKNAAGTN 429

Query: 383 ERLLVE 388
            + + +
Sbjct: 430 MKTITK 435



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 94/271 (34%), Gaps = 68/271 (25%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V + D        ++ +  ++   P +S +GK  L S +      +Y V        +L
Sbjct: 23  NVAVADDLEAEKLTKVASNVALDSNPVWSPDGKEILFSRENG----LYKVFSDGTGEMKL 78

Query: 298 TNTLFINISA--SYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKRISQDKEASYF 350
           T+T   N ++  ++SPD S+I +  +R       +  L++M SNG  +K++       Y+
Sbjct: 79  TSTKGKNFTSDYAWSPDGSKISYIENRYDTAAGPRSDLWIMNSNGEGKKQLLDTIWYRYY 138

Query: 351 D-PVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQER------------------------ 384
               W P G  I + +   E   +   M  DGS +                         
Sbjct: 139 YIYTWFPTGSKILYAEIYEEIGGSYWEMDSDGSNKHNIGNMGIANGIALSPDASKIAICA 198

Query: 385 --------------------------LLVEDSNLQAPTWSPSGRSLIFSRKKD----GDT 414
                                     +  +  + Q+  W+P G  +++   K+     D 
Sbjct: 199 HGPADVDYYIDVGKVGKDLTSFRYGLITHQTQSRQSQIWAPDGSKIVYYAGKNESYYEDE 258

Query: 415 GSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            S++Y +  +G     L +  A  + P +  
Sbjct: 259 NSEIYIVKADGTGRIQLTSDSANDNSPVFSP 289


>gi|56459628|ref|YP_154909.1| acylaminoacyl-peptidase [Idiomarina loihiensis L2TR]
 gi|56178638|gb|AAV81360.1| Acylaminoacyl-peptidase [Idiomarina loihiensis L2TR]
          Length = 671

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 65/327 (19%), Positives = 117/327 (35%), Gaps = 65/327 (19%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G++ +  +  S  + +      L     DG +IR LT        +P +SP+  ++A
Sbjct: 40  HPSGEW-TVFVRQSMDINNDRKVGRLWASLPDG-DIRPLT-GSQGSESQPVWSPSGDRLA 96

Query: 228 YATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV---------- 276
           Y + +     + +Y +D+    A  ++    S +    +S +G +   S+          
Sbjct: 97  YVSTETGSPQVHIYWVDSGDSAAVTQLTQAPSGL---SWSPDGSQIAFSMFTPKSQPAPV 153

Query: 277 ------------------------------QKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                                          KD    IY +     +  +LT+  F +  
Sbjct: 154 SLPGKPEGADWTAAPKYIDKGNYRYDGGGYAKDGHQQIYVIPATGGSPRQLTDEEFNHGG 213

Query: 307 -ASYSPDSSQIVFESDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             S+SPDS  I F ++R           ++Y +  +  +   I+ +++     P  SP G
Sbjct: 214 QLSWSPDSKHIFFSANRRDDAFRQPVNSEIYRLTLSTKEITAIT-ERDGPDGSPKVSPNG 272

Query: 359 DLIAFTKFSGEKF-----AIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKD 411
           + IAFT +   K       + VM  DGS   LL  D +       W      + F+   +
Sbjct: 273 EKIAFTGYDDTKMSFQASNLYVMDLDGSDVELLTGDLDHSVTGFEWDRDSEGVYFTYDNN 332

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYAS 438
           G    +L   DL+G +  L N     S
Sbjct: 333 G--VGQLARTDLDGDHTQLTNRVGGLS 357



 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 91/284 (32%), Gaps = 60/284 (21%)

Query: 212 QILFEPRFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           +    P   P+ +   +         D     L  +  D   + +   +     P +S +
Sbjct: 32  EYASSPTIHPSGEWTVFVRQSMDINNDRKVGRLWASLPDGDIRPLTGSQGSESQPVWSPS 91

Query: 269 GKRALISVQKDEAMDIYSVDLQSN---ATERLTNTLFINISASYSPDSSQIVFE------ 319
           G R      +  +  ++   + S    A  +LT         S+SPD SQI F       
Sbjct: 92  GDRLAYVSTETGSPQVHIYWVDSGDSAAVTQLTQAPS---GLSWSPDGSQIAFSMFTPKS 148

Query: 320 ----------------------------------SDREGKEQLYVMQSNGSDQKRISQDK 345
                                               ++G +Q+YV+ + G   ++++ ++
Sbjct: 149 QPAPVSLPGKPEGADWTAAPKYIDKGNYRYDGGGYAKDGHQQIYVIPATGGSPRQLTDEE 208

Query: 346 EASYFDPVWSPQGDLIAFT-KFSGEKF------AIGVMKKDGSQERLLVE-DSNLQAPTW 397
                   WSP    I F+     + F       I  +     +   + E D    +P  
Sbjct: 209 FNHGGQLSWSPDSKHIFFSANRRDDAFRQPVNSEIYRLTLSTKEITAITERDGPDGSPKV 268

Query: 398 SPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLINTPAYAS 438
           SP+G  + F+   D       S LY +DL+G +  L+      S
Sbjct: 269 SPNGEKIAFTGYDDTKMSFQASNLYVMDLDGSDVELLTGDLDHS 312



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 54/365 (14%), Positives = 111/365 (30%), Gaps = 71/365 (19%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           D+ + +++            R +  +   +  Q +    GD   R+ +VS    S  +  
Sbjct: 54  DINNDRKVGRLWASLPDGDIRPLTGSQGSES-QPVWSPSGD---RLAYVSTETGSPQVHI 109

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL-------------- 237
              V   D A +  LT +   +     +SP+  ++A++ +  +                 
Sbjct: 110 -YWVDSGDSAAVTQLTQAPSGL----SWSPDGSQIAFSMFTPKSQPAPVSLPGKPEGADW 164

Query: 238 -------------------------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
                                    ++Y++        +      +      +S + K  
Sbjct: 165 TAAPKYIDKGNYRYDGGGYAKDGHQQIYVIPATGGSPRQLTDEEFNHGGQLSWSPDSKHI 224

Query: 273 LISVQKDE-------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
             S  + +         +IY + L +     +T     + S   SP+  +I F    + K
Sbjct: 225 FFSANRRDDAFRQPVNSEIYRLTLSTKEITAITERDGPDGSPKVSPNGEKIAFTGYDDTK 284

Query: 326 E-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  LYVM  +GSD + ++ D + S     W    + + FT  +     +     DG
Sbjct: 285 MSFQASNLYVMDLDGSDVELLTGDLDHSVTGFEWDRDSEGVYFTYDNNGVGQLARTDLDG 344

Query: 381 SQERLLVEDSNLQAPT------WS-PSGRSLIFS-RKKDGDTGSKLYSIDLNGRNETLIN 432
              +L      L          +S   G  + F+           L+    +G  + L  
Sbjct: 345 DHTQLTNRVGGLSYARPYGGGDFSVAKGDRIAFTISNPMRPAELALWD---DGDVQQLTR 401

Query: 433 TPAYA 437
               A
Sbjct: 402 LNEDA 406



 Score = 36.5 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 4/55 (7%)

Query: 394 APTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +PT  PSG   +F R+     +     +L++   +G    L  +    S P W  
Sbjct: 36  SPTIHPSGEWTVFVRQSMDINNDRKVGRLWASLPDGDIRPLTGSQGSESQPVWSP 90


>gi|262197963|ref|YP_003269172.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262081310|gb|ACY17279.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1623

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 65/307 (21%), Positives = 124/307 (40%), Gaps = 31/307 (10%)

Query: 148  PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE-----SVVSGIIKNSLCVMDRDGAN 202
            PA WR++A      I Q +       +S + F +       V +     ++ V   DG  
Sbjct: 952  PAPWRELAQGA---IQQQVADVVLRHDSSVWFAAYSPDGARVATATFDGTVRVWRADGTG 1008

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
               +    +  +    FSP+  +VA A+YD      V + D      P  +      +  
Sbjct: 1009 EPLVLGKHENRVLSLTFSPDGARVASASYDG----TVRVWDADGASPPTILSGHEMALYT 1064

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              FS +G R + +  ++    I++ D  S  T  L        SA +SPD ++IV  S+ 
Sbjct: 1065 VDFSPDGARIV-TAAREGVARIWNAD-GSGETVVLRGHEGPVRSARFSPDGARIVTTSE- 1121

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               + + V  ++GS + R+ +   A+ +   +SP G  +A     G      V   D   
Sbjct: 1122 --DQTVRVWNADGSGEPRVLRGHTATVYSARFSPDGRRLASASLDGSA---RVWDLDHPD 1176

Query: 383  ERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTP 434
            E ++      ++ A  +SP GR ++ +     D  ++++ ++  G + TL      +N+ 
Sbjct: 1177 ESVIFNGHQGDVYAAVFSPDGRRVVTAS---ADGTARVWDLERPGHSTTLRGHRDGVNSA 1233

Query: 435  AYASDPQ 441
             ++ D  
Sbjct: 1234 DFSPDGA 1240



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 77/474 (16%), Positives = 161/474 (33%), Gaps = 97/474 (20%)

Query: 51   AFTKFVSIDELGGKVSEVVSKDLQR--SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGA 108
            A  + ++   +  +V++VV   L+   S  F   S D  +      D   R   W + G 
Sbjct: 953  APWRELAQGAIQQQVADVV---LRHDSSVWFAAYSPDGARVATATFDGTVRV--WRADGT 1007

Query: 109  -QVLVTG-------RVIKEGKD------RLRVEFRLWD--------VKDRKQIIGKKFFS 146
             + LV G        +                  R+WD        +    ++       
Sbjct: 1008 GEPLVLGKHENRVLSLTFSPDGARVASASYDGTVRVWDADGASPPTILSGHEMALYTVDF 1067

Query: 147  SPASWRKIAHTI--------SDDIYQSIT---GEKGDFNSRILFVSESVVSGIIKNSLCV 195
            SP   R +            +D   +++     E    ++R       +V+     ++ V
Sbjct: 1068 SPDGARIVTAAREGVARIWNADGSGETVVLRGHEGPVRSARFSPDGARIVTTSEDQTVRV 1127

Query: 196  MDRDGANIRYLTPSRDQILFEPRFSPNQQKVA---------------------------- 227
             + DG+    +       ++  RFSP+ +++A                            
Sbjct: 1128 WNADGSGEPRVLRGHTATVYSARFSPDGRRLASASLDGSARVWDLDHPDESVIFNGHQGD 1187

Query: 228  -YATYDDEDILRVY---------LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             YA     D  RV          + D         +   R  + +  FS +G R L +  
Sbjct: 1188 VYAAVFSPDGRRVVTASADGTARVWDLERPGHSTTLRGHRDGVNSADFSPDGARIL-TAS 1246

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            +D    I++V  +   T  L        +A +SPD +++   + R+   +++   ++G+ 
Sbjct: 1247 EDRTARIWNV-AELAYTVHLRGHEQEVHAAEFSPDGARVA-TASRDHTARIW--NADGTG 1302

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAP 395
            +  + +  E      V+SP G  +             V   DGS E +++      L A 
Sbjct: 1303 EPVVLRGHEDQLMGAVFSPDGARVVTVSLDKTA---RVWNADGSGEPVVLRGHEDTLYAA 1359

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWV 443
             +SP G  ++ +     D  +++++ D +G    L      + +  ++ + ++V
Sbjct: 1360 AFSPDGTRVVTASL---DKTARVWNADGSGEPLVLRGHEHYLTSATFSPEGEYV 1410



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 93/255 (36%), Gaps = 29/255 (11%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             V +    ++  + + DG     +    +  L    FSP+  +V   + D        + 
Sbjct: 1283 RVATASRDHTARIWNADGTGEPVVLRGHEDQLMGAVFSPDGARVVTVSLDK----TARVW 1338

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            +      P  +      + A  FS +G R +++   D+   +++ D  S     L     
Sbjct: 1339 NADGSGEPVVLRGHEDTLYAAAFSPDGTR-VVTASLDKTARVWNAD-GSGEPLVLRGHEH 1396

Query: 303  INISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               SA++SP+   ++  S DR     + V  ++GS Q R+    + + +    +P G+ +
Sbjct: 1397 YLTSATFSPEGEYVLTTSYDRT----VRVWNADGSGQPRLLGRHQDAVYSLEIAPDGERV 1452

Query: 362  AFTKFSGEKFAIG-----------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            A T  +     I            ++   GS   +           + P G  ++     
Sbjct: 1453 A-TSSADGVVRIWRSWRAADPGPPILLPHGSAASIGTGSGTG---AFHPDGTRIV---TV 1505

Query: 411  DGDTGSKLYSIDLNG 425
             GD   ++++ D +G
Sbjct: 1506 TGDDLLRVWNSDGSG 1520



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 84/243 (34%), Gaps = 18/243 (7%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             VV+  +  +  V + DG+    +    +  L+   FSP+  +V  A+ D        + 
Sbjct: 1325 RVVTVSLDKTARVWNADGSGEPVVLRGHEDTLYAAAFSPDGTRVVTASLDK----TARVW 1380

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            +      P  +      + +  FS  G+  L +   D  + +++ D  S     L     
Sbjct: 1381 NADGSGEPLVLRGHEHYLTSATFSPEGEYVL-TTSYDRTVRVWNAD-GSGQPRLLGRHQD 1438

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQ--SNGSDQKRISQDKEAS----YFDPVWSP 356
               S   +PD  ++   S  +G  +++     ++      +     AS         + P
Sbjct: 1439 AVYSLEIAPDGERVA-TSSADGVVRIWRSWRAADPGPPILLPHGSAASIGTGSGTGAFHP 1497

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDT 414
             G  I           + V   DGS + +L    +++L    +S  G  ++ +   +   
Sbjct: 1498 DGTRIVTVT---GDDLLRVWNSDGSGQPVLFRVPNAHLFTAVFSDDGERVVTASDSEFHA 1554

Query: 415  GSK 417
             + 
Sbjct: 1555 ATD 1557



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 78/215 (36%), Gaps = 25/215 (11%)

Query: 160  DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            D +Y +     G            VV+  +  +  V + DG+    +    +  L    F
Sbjct: 1354 DTLYAAAFSPDG----------TRVVTASLDKTARVWNADGSGEPLVLRGHEHYLTSATF 1403

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP  + V   +YD      V + +      P+ +G  +  + +   + +G+R   +   D
Sbjct: 1404 SPEGEYVLTTSYDR----TVRVWNADGSGQPRLLGRHQDAVYSLEIAPDGERVA-TSSAD 1458

Query: 280  EAMDIYSV--DLQSNATERLTNTLFINIS-----ASYSPDSSQIVFESDREGKEQLYVMQ 332
              + I+             L +    +I       ++ PD ++IV      G + L V  
Sbjct: 1459 GVVRIWRSWRAADPGPPILLPHGSAASIGTGSGTGAFHPDGTRIV---TVTGDDLLRVWN 1515

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            S+GS Q  + +   A  F  V+S  G+ +     S
Sbjct: 1516 SDGSGQPVLFRVPNAHLFTAVFSDDGERVVTASDS 1550


>gi|163845964|ref|YP_001634008.1| peptidase S41 [Chloroflexus aurantiacus J-10-fl]
 gi|222523689|ref|YP_002568159.1| peptidase S41 [Chloroflexus sp. Y-400-fl]
 gi|163667253|gb|ABY33619.1| peptidase S41 [Chloroflexus aurantiacus J-10-fl]
 gi|222447568|gb|ACM51834.1| peptidase S41 [Chloroflexus sp. Y-400-fl]
          Length = 1062

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 85/427 (19%), Positives = 150/427 (35%), Gaps = 64/427 (14%)

Query: 76  SDVFNLIS-QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF------ 128
           S    ++       ++IT  D     +DW + G  V  T  + + G    RV+       
Sbjct: 69  SGDLYVLDLAGGPPRQITFQDEQCTPEDWANDGDAVFFTTAIEQMGSAIYRVKTSGGTPA 128

Query: 129 --------RLWDVKDRKQIIGKKFFSSPASW-RKIAHTIS---------DDIYQSITGEK 170
                   +L  V          F +    W R+  H  S         D  Y+++    
Sbjct: 129 PIYLEPYEQLGQVAVSPDGTRLAFVNIRERWWRRGPHPFSSNEIWLGPTDPDYRALCQIA 188

Query: 171 GDFNSRILFVSESVV---SGIIKNSLCVMDRDG-----------ANIRYLTPSRDQILFE 216
           G F  R+++  +      +   +    V D DG              R +T  RD  L  
Sbjct: 189 GPFGQRLVYAGKLGWPLWAPDGQGLYIVCDSDGNENLWYLPLGEGEARQITHFRDGRLLF 248

Query: 217 PRFSPNQQKVAYATYDDEDILRV-----------YLMDTRIDRAPKRIGNFRSMILAPRF 265
           P  +  +  V      D  + R+             +     R P R+  + S     R 
Sbjct: 249 PAIA-RRNNVIVCERGDGQLWRIDPISGESVPVPIRVRIDSKRTPVRVERWTSGFSEVRL 307

Query: 266 SSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           S +GK+  I  + D   D        DL+     R+TNT     S +++PDS ++++ SD
Sbjct: 308 SPDGKKLAIVARGDVFADFADKETDRDLRQGPAFRVTNTPAREWSIAWAPDSQRLIYLSD 367

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R G+ +L+    +   ++++++D       P  +P G  IA+ +   ++  I V++    
Sbjct: 368 RYGEVELFAYDFSSGQEQQLTRDGR-PKMLPRIAPDGKSIAYIR---DQRIIEVIEVTDP 423

Query: 382 QERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--TPAYA 437
             R + +     A    WSP  R L F   +D    S +Y +   G     I   +    
Sbjct: 424 SPREVCQARFAVAADLCWSPDSRYLAFIA-QDDRLFSNVYIVPAAGGEPRQITFLSNLDG 482

Query: 438 SDPQWVG 444
            +  W  
Sbjct: 483 GNLCWSP 489



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 83/211 (39%), Gaps = 9/211 (4%)

Query: 218 RFSPNQQKVAYATYD--DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           R SP+ +K+A         D                R+ N  +   +  ++ + +R +  
Sbjct: 306 RLSPDGKKLAIVARGDVFADFADKETDRDLRQGPAFRVTNTPAREWSIAWAPDSQRLIYL 365

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +   +++++ D  S   ++LT      +    +PD   I +  D   +  + V++   
Sbjct: 366 SDRYGEVELFAYDFSSGQEQQLTRDGRPKMLPRIAPDGKSIAYIRD---QRIIEVIEVTD 422

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQA 394
              + + Q + A   D  WSP    +AF       F  + ++   G + R +   SNL  
Sbjct: 423 PSPREVCQARFAVAADLCWSPDSRYLAFIAQDDRLFSNVYIVPAAGGEPRQITFLSNLDG 482

Query: 395 P--TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               WSP G  +IF+ ++     +++  +DL
Sbjct: 483 GNLCWSPDGSFIIFTTEQY-RLEAQIARVDL 512



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 86/244 (35%), Gaps = 29/244 (11%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              +L +P   P+ + +A+    D     V+L+        +R+    +    PRFS +G
Sbjct: 4   SQALLRQPALDPDGRLLAFIAAGD-----VWLVSIE-GGVAERLTAHPASHYGPRFSPDG 57

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQL 328
           +R L S  +D + D+Y +DL      ++T          ++ D   + F +  E     +
Sbjct: 58  QRILFSAGRDGSGDLYVLDLAGGPPRQITFQDEQCTPEDWANDGDAVFFTTAIEQMGSAI 117

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----------AIGVMKK 378
           Y ++++G     I  +          SP G  +AF       +           I +   
Sbjct: 118 YRVKTSGGTPAPIYLEPYEQLGQVAVSPDGTRLAFVNIRERWWRRGPHPFSSNEIWLGPT 177

Query: 379 D----------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           D          G   + LV    L  P W+P G+ L      DG     L+ + L     
Sbjct: 178 DPDYRALCQIAGPFGQRLVYAGKLGWPLWAPDGQGLYIVCDSDG--NENLWYLPLGEGEA 235

Query: 429 TLIN 432
             I 
Sbjct: 236 RQIT 239



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 55/332 (16%), Positives = 101/332 (30%), Gaps = 53/332 (15%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R  AH  S   Y       G    RILF +    SG     L V+D  G   R +T  +D
Sbjct: 40  RLTAHPASH--YGPRFSPDG---QRILFSAGRDGSG----DLYVLDLAGGPPRQIT-FQD 89

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +      ++ +   V + T  ++    +Y + T               +     S +G R
Sbjct: 90  EQCTPEDWANDGDAVFFTTAIEQMGSAIYRVKTSGGTPAPIYLEPYEQLGQVAVSPDGTR 149

Query: 272 ALISVQKDEAM------------DIYSVDLQSNATERLTNTLFIN-------ISASYSPD 312
                 ++                +   D    A  ++                  ++PD
Sbjct: 150 LAFVNIRERWWRRGPHPFSSNEIWLGPTDPDYRALCQIAGPFGQRLVYAGKLGWPLWAPD 209

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +    D +G E L+ +     + ++I+  ++     P  + + ++I   +  G+ + 
Sbjct: 210 GQGLYIVCDSDGNENLWYLPLGEGEARQITHFRDGRLLFPAIARRNNVIVCERGDGQLWR 269

Query: 373 IG-------------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI-------FSRKKDG 412
           I               +    +  R+    S       SP G+ L        F+   D 
Sbjct: 270 IDPISGESVPVPIRVRIDSKRTPVRVERWTSGFSEVRLSPDGKKLAIVARGDVFADFADK 329

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +T   L      G    + NTPA      W  
Sbjct: 330 ETDRDL----RQGPAFRVTNTPAREWSIAWAP 357



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 90/255 (35%), Gaps = 34/255 (13%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++  +G     LT       + PRFSP+ Q++ ++   D     +Y++D      P+
Sbjct: 27  DVWLVSIEGGVAERLTA-HPASHYGPRFSPDGQRILFSAGRDGSG-DLYVLDL-AGGPPR 83

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISA-SY 309
           +I           ++++G     +   ++    IY V         +    +  +   + 
Sbjct: 84  QITFQDEQCTPEDWANDGDAVFFTTAIEQMGSAIYRVKTSGGTPAPIYLEPYEQLGQVAV 143

Query: 310 SPDSSQIVFESDRE----------GKEQLYVMQSN----------GSDQKRISQDKEASY 349
           SPD +++ F + RE             ++++  ++          G   +R+    +   
Sbjct: 144 SPDGTRLAFVNIRERWWRRGPHPFSSNEIWLGPTDPDYRALCQIAGPFGQRLVYAGK--L 201

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFS 407
             P+W+P G  +     S     +  +     + R +    D  L  P  +     ++  
Sbjct: 202 GWPLWAPDGQGLYIVCDSDGNENLWYLPLGEGEARQITHFRDGRLLFPAIARRNNVIVCE 261

Query: 408 RKKDGDTGSKLYSID 422
           R        +L+ ID
Sbjct: 262 RGDG-----QLWRID 271



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 74/227 (32%), Gaps = 31/227 (13%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFRSMI 260
            R +  +R  +  +  +SP+ + +A+   DD     VY++        +   + N     
Sbjct: 425 PREVCQARFAVAADLCWSPDSRYLAFIAQDDRLFSNVYIVPAAGGEPRQITFLSNLDGGN 484

Query: 261 LAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNAT-------ERLTNTLFI-NISASYSP 311
           L   +S +G   + + ++      I  VDL+ +         ERL               
Sbjct: 485 LC--WSPDGSFIIFTTEQYRLEAQIARVDLRPSQPVFRETAFERLFEKKEEKPTEP---- 538

Query: 312 DSSQIV---FESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFS 367
              Q       S    +  +Y     G +++ R+    + +      SP G  + F    
Sbjct: 539 -GDQSAKEPRVSQPLTEPIIY----EGIERRLRLLTPPQMNAMAGPISPDGKDLLFLASV 593

Query: 368 GEKFAIGVMKKD----GSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
             K  +  M  D        R L   D+      ++P GRS  +   
Sbjct: 594 AGKVDVWTMPLDEPRANQPPRQLTASDTRKGFLQFAPDGRSFYYLED 640



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/219 (11%), Positives = 66/219 (30%), Gaps = 54/219 (24%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +++       + +++ ++   G   R +T   +       +SP+   + + T       +
Sbjct: 447 YLAFIAQDDRLFSNVYIVPAAGGEPRQITFLSNLDGGNLCWSPDGSFIIFTTEQYRLEAQ 506

Query: 239 VYLMDTR-----------------------------------------------IDRAPK 251
           +  +D R                                               I+R  +
Sbjct: 507 IARVDLRPSQPVFRETAFERLFEKKEEKPTEPGDQSAKEPRVSQPLTEPIIYEGIERRLR 566

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ----SNATERLTNTLFINISA 307
            +   +   +A   S +GK  L        +D++++ L     +    +LT +       
Sbjct: 567 LLTPPQMNAMAGPISPDGKDLLFLASVAGKVDVWTMPLDEPRANQPPRQLTASDTRKGFL 626

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            ++PD     +  D    + +      G++  R+S   E
Sbjct: 627 QFAPDGRSFYYLED---GQVVVRRFPGGNEPNRLSLRAE 662


>gi|326446361|ref|ZP_08221095.1| hypothetical protein SclaA2_35082 [Streptomyces clavuligerus ATCC
           27064]
          Length = 1100

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 92/247 (37%), Gaps = 32/247 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + +++        ++  +     R       +         P  S +G+   ++  +   
Sbjct: 77  DGRRLV------AEVQNILWSLDRDGSPAVPLTPPDLEPTRPVISPDGREVAMAAYRGGF 130

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------QLYVMQSNG 335
             I+ +    +   RLT   F +   S+SPD ++I F S+R G        +++ +    
Sbjct: 131 FSIWVMRTDGSRLRRLTGGPFDDRGPSWSPDGTRIAFSSERGGDPVAGSPYRIWTVNVRD 190

Query: 336 SDQKRIS---------QDKEASYFDPVWSPQGDLIAFTKFSGE-----KFAIGVMKKDGS 381
               R++         QD     FDPVWS  G  + F +            I  +  DG 
Sbjct: 191 GGLTRLTGLPGQQGPAQDGPWEDFDPVWSADGSRVLFVRGRFTAPALVSRTIASVPADGG 250

Query: 382 QERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              ++ E    + NL  P  SP+GR+  + R   G    +  ++ ++G    L    A A
Sbjct: 251 GGPVVTEHTATEGNLLTPAVSPAGRT-AWLRSVPGPARPETITLFVDGEPVALDGDLAPA 309

Query: 438 SDPQWVG 444
             P+W+G
Sbjct: 310 P-PRWIG 315



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 86/239 (35%), Gaps = 26/239 (10%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +N L  +DRDG+    LTP  D     P  SP+ ++VA A Y       +++M T   R 
Sbjct: 86  QNILWSLDRDGSPAVPLTP-PDLEPTRPVISPDGREVAMAAYR-GGFFSIWVMRTDGSRL 143

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAM------DIYSVDLQSNATERLT----- 298
            +R+         P +S +G R   S ++           I++V+++     RLT     
Sbjct: 144 -RRLTGGPFDDRGPSWSPDGTRIAFSSERGGDPVAGSPYRIWTVNVRDGGLTRLTGLPGQ 202

Query: 299 -----NTLFINISASYSPDSSQIVFESDREGKEQLY-----VMQSNGSDQKRIS--QDKE 346
                +  + +    +S D S+++F   R     L       + ++G     ++     E
Sbjct: 203 QGPAQDGPWEDFDPVWSADGSRVLFVRGRFTAPALVSRTIASVPADGGGGPVVTEHTATE 262

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +   P  SP G         G      +      +   L  D     P W    + LI
Sbjct: 263 GNLLTPAVSPAGRTAWLRSVPGPARPETITLFVDGEPVALDGDLAPAPPRWIGDEQLLI 321



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 85/253 (33%), Gaps = 39/253 (15%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKR 271
           +  P+ SP+ + VA+A       L           AP+RI   +  + I  P ++ +G+ 
Sbjct: 372 VHLPQLSPDGRTVAFA------ALNSLWTVRASGGAPRRIVRSSPTAYIQGPVWTPDGRA 425

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            + +  +D    +   DL       L     +      SPD +++    D  G   +  +
Sbjct: 426 LIYTDDRDGLNAVRRRDLADGTETVLAAGGRVQGVP--SPDGTRLA-CLDMAGNLVVRDL 482

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-------TKFSGEKFAIGVMKKDGSQER 384
            +        +         P WSP G  IA         +F      I ++       R
Sbjct: 483 AAGTERTLVAALGAGGLPGRPSWSPDGRWIALCDRNRLNHRFREGHNLIRIVDAATGASR 542

Query: 385 L-------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL------NGRNETLI 431
           L        + D     P WSP GR L    +      S L+ + +      +G    L 
Sbjct: 543 LHGMGPYVSLSDRYASGPVWSPDGRWLACVSE------SALWLLPVGPDGVPSGEARRLN 596

Query: 432 NTPAYASDPQWVG 444
           + PA    P W G
Sbjct: 597 DEPAD--HPSWSG 607



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 58/302 (19%), Positives = 100/302 (33%), Gaps = 41/302 (13%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-PRFSPN 222
           +     +G    ++       V+    NSL  +   G   R +  S      + P ++P+
Sbjct: 364 ERPRPVRGVHLPQLS-PDGRTVAFAALNSLWTVRASGGAPRRIVRSSPTAYIQGPVWTPD 422

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + + Y   DD D L         D     +     +   P  S +G R       D A 
Sbjct: 423 GRALIYT--DDRDGLNAVRRRDLADGTETVLAAGGRVQGVP--SPDGTRLAC---LDMAG 475

Query: 283 DIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFE-------SDREGKEQLYVMQ 332
           ++   DL +     L   L    +    S+SPD   I            REG   + ++ 
Sbjct: 476 NLVVRDLAAGTERTLVAALGAGGLPGRPSWSPDGRWIALCDRNRLNHRFREGHNLIRIVD 535

Query: 333 SNGSDQK-----RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV--MKKDG---SQ 382
           +     +           +     PVWSP G  +A    S    A+ +  +  DG    +
Sbjct: 536 AATGASRLHGMGPYVSLSDRYASGPVWSPDGRWLACVSES----ALWLLPVGPDGVPSGE 591

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASD 439
            R L ++     P+WS + R+L++          +L  ID +GR       +        
Sbjct: 592 ARRLNDEPAD-HPSWSGNSRTLLYQSN----GRLRLLGIDASGRPAGAPRTVPVSLDVRR 646

Query: 440 PQ 441
           P 
Sbjct: 647 PA 648



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 57/361 (15%), Positives = 112/361 (31%), Gaps = 59/361 (16%)

Query: 130 LWDVKDRKQIIGKKFFSSPASW-RKIAHTISD----DIYQSITGEKGDFNSRILFVSESV 184
           +W     + +  +  F++PA   R IA   +D     +    T  +G+  +  +  +   
Sbjct: 217 VWSADGSRVLFVRGRFTAPALVSRTIASVPADGGGGPVVTEHTATEGNLLTPAVSPAGRT 276

Query: 185 -----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-----YATYDDE 234
                V G  +     +  DG     +    D     PR+  ++Q +      +      
Sbjct: 277 AWLRSVPGPARPETITLFVDGEP---VALDGDLAPAPPRWIGDEQLLITLGGQFQIIRPH 333

Query: 235 DILRVYLMDTRIDRAPKRIG-------------NFRSMILAPRFSSNGKRALISVQKDEA 281
                 L+        +R                    +  P+ S +G+    +      
Sbjct: 334 RERTGTLVPLDATLRVRRPAYTVKTYALEAERPRPVRGVHLPQLSPDGRTVAFAA----L 389

Query: 282 MDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             +++V     A  R+  +          ++PD   +++  DR+G   +         + 
Sbjct: 390 NSLWTVRASGGAPRRIVRSSPTAYIQGPVWTPDGRALIYTDDRDGLNAVRRRDLADGTET 449

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAP 395
            ++          V SP G  +A    +G    + V       ER LV           P
Sbjct: 450 VLAAGGR---VQGVPSPDGTRLACLDMAG---NLVVRDLAAGTERTLVAALGAGGLPGRP 503

Query: 396 TWSPSGRSLIFS-------RKKDGDTGSKLYSI-----DLNGRNETLINTPAYASDPQWV 443
           +WSP GR +          R ++G    ++         L+G    +  +  YAS P W 
Sbjct: 504 SWSPDGRWIALCDRNRLNHRFREGHNLIRIVDAATGASRLHGMGPYVSLSDRYASGPVWS 563

Query: 444 G 444
            
Sbjct: 564 P 564



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 100/303 (33%), Gaps = 63/303 (20%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-----ILRVYLMDTRI 246
           S+ VM  DG+ +R LT         P +SP+  ++A+++    D       R++ ++ R 
Sbjct: 132 SIWVMRTDGSRLRRLT-GGPFDDRGPSWSPDGTRIAFSSERGGDPVAGSPYRIWTVNVRD 190

Query: 247 DRAPKRIG---------NFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSN 292
               +  G         +       P +S++G R L    +  A       I SV     
Sbjct: 191 GGLTRLTGLPGQQGPAQDGPWEDFDPVWSADGSRVLFVRGRFTAPALVSRTIASVPADGG 250

Query: 293 ATERLTNTLFINIS---ASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEAS 348
               +T       +    + SP        S     + +   +  +G     ++ D + +
Sbjct: 251 GGPVVTEHTATEGNLLTPAVSPAGRTAWLRSVPGPARPETITLFVDGEP---VALDGDLA 307

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTW---------- 397
              P W     L+      G +F I    ++       L     ++ P +          
Sbjct: 308 PAPPRWIGDEQLLI---TLGGQFQIIRPHRERTGTLVPLDATLRVRRPAYTVKTYALEAE 364

Query: 398 -------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI--NTP-AYASDPQ 441
                        SP GR++ F+        + L+++  +G     I  ++P AY   P 
Sbjct: 365 RPRPVRGVHLPQLSPDGRTVAFAA------LNSLWTVRASGGAPRRIVRSSPTAYIQGPV 418

Query: 442 WVG 444
           W  
Sbjct: 419 WTP 421



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 55/309 (17%), Positives = 100/309 (32%), Gaps = 51/309 (16%)

Query: 175 SRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSR--DQILFEPRFSPNQQKVAYATY 231
           SR+LFV        ++  ++  +  DG     +T     +  L  P  SP  +       
Sbjct: 223 SRVLFVRGRFTAPALVSRTIASVPADGGGGPVVTEHTATEGNLLTPAVSPAGRTAW--LR 280

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-----------QKDE 280
                 R   +   +D  P  + +       PR+  + ++ LI++           ++  
Sbjct: 281 SVPGPARPETITLFVDGEPVAL-DGDLAPAPPRWIGD-EQLLITLGGQFQIIRPHRERTG 338

Query: 281 AMDIYSVDLQSNATERLTNTLFINIS----------ASYSPDSSQIVFESDREGKEQLYV 330
            +      L+         T  +                SPD   + F +       L+ 
Sbjct: 339 TLVPLDATLRVRRPAYTVKTYALEAERPRPVRGVHLPQLSPDGRTVAFAA----LNSLWT 394

Query: 331 MQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++++G   +RI +    +Y   PVW+P G  + +T       A+         E +L   
Sbjct: 395 VRASGGAPRRIVRSSPTAYIQGPVWTPDGRALIYTDDRDGLNAVRRRDLADGTETVLAAG 454

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET----------LINTPAYAS 438
             +Q  P  SP G  L        D    L   DL    E           L   P+++ 
Sbjct: 455 GRVQGVP--SPDGTRLACL-----DMAGNLVVRDLAAGTERTLVAALGAGGLPGRPSWSP 507

Query: 439 DPQWVGFMD 447
           D +W+   D
Sbjct: 508 DGRWIALCD 516


>gi|16124371|ref|NP_418935.1| hypothetical protein CC_0116 [Caulobacter crescentus CB15]
 gi|13421223|gb|AAK22103.1| hypothetical protein CC_0116 [Caulobacter crescentus CB15]
          Length = 1096

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 15/169 (8%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           RI       +    S +GK     +  D    IY++ +      R+   L  +    +SP
Sbjct: 47  RISVDNGTWMNVDVSRDGKLIAFDILGD----IYTMPITGGTPTRIAEGLAYDQQPRFSP 102

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKF 366
           D  +I F SDR G + ++VM  +G D++++++++      P WSP G  I       T  
Sbjct: 103 DGKRIAFTSDRGGGDNIWVMNLDGGDKRQVTKEEFRLLNQPSWSPDGRFIVAKKHFTTGR 162

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRK 409
           S     + V    G     LV+ ++ Q       P ++  G+S+ ++R 
Sbjct: 163 SLGTGEVWVYHVSGGGGVQLVKRASEQLQKELGEPIYAADGKSVFYTRN 211



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 32/236 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + +A+    D     +Y M       P RI    +    PRFS +GKR   +  + 
Sbjct: 61  SRDGKLIAFDILGD-----IYTMPI-TGGTPTRIAEGLAYDQQPRFSPDGKRIAFTSDRG 114

Query: 280 EAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV----FESDRE-GKEQLYVMQS 333
              +I+ ++L      ++T   F  ++  S+SPD   IV    F + R  G  +++V   
Sbjct: 115 GGDNIWVMNLDGGDKRQVTKEEFRLLNQPSWSPDGRFIVAKKHFTTGRSLGTGEVWVYHV 174

Query: 334 NGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKF-------------SGEKFAIGVM 376
           +G       KR S+  +    +P+++  G  + +T+              +   F I   
Sbjct: 175 SGGGGVQLVKRASEQLQKELGEPIYAADGKSVFYTRNVTPGPIFEYAQDSNTALFDIERY 234

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             +  +    V        PT SP G+ + F R++   T SKLY  DL    E  I
Sbjct: 235 DLETGEVTTAVSGLGGSVRPTPSPDGKKIAFVRRE--RTKSKLYVKDLTSGEERKI 288



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 110/325 (33%), Gaps = 70/325 (21%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATY 231
           RI F S+          + VM+ DG + R +T    ++L +P +SP+ + +     + T 
Sbjct: 106 RIAFTSDRGGGDN----IWVMNLDGGDKRQVTKEEFRLLNQPSWSPDGRFIVAKKHFTTG 161

Query: 232 DDEDILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRALISVQKDEAM----- 282
                  V++         + +       +  +  P ++++GK    +            
Sbjct: 162 RSLGTGEVWVYHVSGGGGVQLVKRASEQLQKELGEPIYAADGKSVFYTRNVTPGPIFEYA 221

Query: 283 --------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                   DI   DL++       + L  ++  + SPD  +I F      K +LYV    
Sbjct: 222 QDSNTALFDIERYDLETGEVTTAVSGLGGSVRPTPSPDGKKIAFVRRERTKSKLYVKDLT 281

Query: 335 GSDQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++++I          +      Y +  W+P G  +    ++G K    V   DG+   
Sbjct: 282 SGEERKIYDALDQDVQETWAVTGVYPNMAWTPDGAAVVV--WAGGKIR-RVNVADGASSV 338

Query: 385 LLV--------------------EDSNLQAPTW---SPSGRSLIFSRKKDGDTGSKLYSI 421
           +                      +    + P W   SP G+S++F      +T  KL+  
Sbjct: 339 IPFKIDDTRVVIDAIHPEVAVAPDRFTTKMPRWASVSPDGKSVVF------ETLGKLWIK 392

Query: 422 DLNGRNETLINTPAYASD---PQWV 443
              G     + +    +    P W 
Sbjct: 393 STAGGEARRLVSGDEDAFELYPSWS 417



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 90/243 (37%), Gaps = 28/243 (11%)

Query: 216 EPRF---SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKR 271
            PR+   SP+ + V + T       ++++  T    A + + G+  +  L P +S +G+ 
Sbjct: 368 MPRWASVSPDGKSVVFETLG-----KLWIKSTAGGEARRLVSGDEDAFELYPSWSRDGRT 422

Query: 272 ALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK----- 325
            +     D     + +V       + +        +  +SPD   IVFE  R G      
Sbjct: 423 IVFVSWTDAGLGRLRTVPAAGGVGKDVIAQPGHYGAPRFSPDGKTIVFERRRGGGLTSGR 482

Query: 326 ----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 +Y + + G    R+S+       +P +    D +     SG+K  +     +G 
Sbjct: 483 WSQDPGIYRVAAAGGTPVRVSRGG----SEPQFGAANDRVFMLMSSGDKRQLVSTDLNGQ 538

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNGRNETLINTPAY 436
             R+      +     SP GR++ F +  +        G++  ++D  G    +    A 
Sbjct: 539 ARRVHASGDMVNDFQVSPDGRNVAFRQNYEAFVMPLMPGTQEVAVDQKGGALPVTRVSAE 598

Query: 437 ASD 439
            ++
Sbjct: 599 GAE 601



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 89/271 (32%), Gaps = 29/271 (10%)

Query: 160 DDIYQSITGEKGDFNSRI---LFVSESVVSGIIKN--SLCV-MDRDGANIRYLTPSRDQI 213
           D I+  +      F +++     VS    S + +    L +     G   R ++   D  
Sbjct: 351 DAIHPEVAVAPDRFTTKMPRWASVSPDGKSVVFETLGKLWIKSTAGGEARRLVSGDEDAF 410

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
              P +S + + + + ++ D  + R+  +        K +        APRFS +GK  +
Sbjct: 411 ELYPSWSRDGRTIVFVSWTDAGLGRLRTVP-AAGGVGKDVIAQPGHYGAPRFSPDGKTIV 469

Query: 274 ISVQKDEA---------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
              ++              IY V        R++          +   + ++        
Sbjct: 470 FERRRGGGLTSGRWSQDPGIYRVAAAGGTPVRVSRGGS---EPQFGAANDRVFMLMSSGD 526

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVM 376
           K QL     NG   +R+    +    D   SP G  +AF +               + V 
Sbjct: 527 KRQLVSTDLNG-QARRVHASGDM-VNDFQVSPDGRNVAFRQNYEAFVMPLMPGTQEVAVD 584

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +K G+     V     +   WS  G+ + +S
Sbjct: 585 QKGGALPVTRVSAEGAEFIHWSRDGKQVHWS 615



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 84/276 (30%), Gaps = 38/276 (13%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            I+ + G + +  +     +++  I   +  M   G     +         +PRFSP+ +
Sbjct: 47  RISVDNGTWMNVDVSRDGKLIAFDILGDIYTMPITGGTPTRIAEGL-AYDQQPRFSPDGK 105

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD- 279
           ++A+ + D      +++M+       +       ++  P +S +G+  +     +  +  
Sbjct: 106 RIAFTS-DRGGGDNIWVMNLDGGDKRQVTKEEFRLLNQPSWSPDGRFIVAKKHFTTGRSL 164

Query: 280 EAMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFESDREGKE-------- 326
              +++   +      +L                Y+ D   + +  +             
Sbjct: 165 GTGEVWVYHVSGGGGVQLVKRASEQLQKELGEPIYAADGKSVFYTRNVTPGPIFEYAQDS 224

Query: 327 -----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 +        +          S   P  SP G  IAF +    K  + V      
Sbjct: 225 NTALFDIERYDLETGEVTTAVSGLGGSVR-PTPSPDGKKIAFVRRERTKSKLYVKDLTSG 283

Query: 382 QERLLVE------------DSNLQAPTWSPSGRSLI 405
           +ER + +                    W+P G +++
Sbjct: 284 EERKIYDALDQDVQETWAVTGVYPNMAWTPDGAAVV 319



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 102/269 (37%), Gaps = 48/269 (17%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----------RIGNFRSMILAPRF 265
            P  SP+ +K+A+   +     ++Y+ D       K                 +     +
Sbjct: 253 RPTPSPDGKKIAFVRRERTKS-KLYVKDLTSGEERKIYDALDQDVQETWAVTGVYPNMAW 311

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSN-------ATERLTNTLFINIS----------AS 308
           + +G  A++     +   +   D  S+        T  + + +   ++            
Sbjct: 312 TPDGA-AVVVWAGGKIRRVNVADGASSVIPFKIDDTRVVIDAIHPEVAVAPDRFTTKMPR 370

Query: 309 Y---SPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFT 364
           +   SPD   +VFE+      +L++  + G + +R+ S D++A    P WS  G  I F 
Sbjct: 371 WASVSPDGKSVVFET----LGKLWIKSTAGGEARRLVSGDEDAFELYPSWSRDGRTIVFV 426

Query: 365 KFSG-EKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS------ 416
            ++      +  +   G   + ++ +  +  AP +SP G++++F R++ G   S      
Sbjct: 427 SWTDAGLGRLRTVPAAGGVGKDVIAQPGHYGAPRFSPDGKTIVFERRRGGGLTSGRWSQD 486

Query: 417 -KLYSIDLNGRNETLINTPAYASDPQWVG 444
             +Y +   G     ++     S+PQ+  
Sbjct: 487 PGIYRVAAAGGTPVRVSRGG--SEPQFGA 513



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/337 (14%), Positives = 105/337 (31%), Gaps = 65/337 (19%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGI--IKNSLCVMDRDGANIRYLTPSRDQILFE---- 216
           ++ +       + R +   +   +G       + V    G     L     + L +    
Sbjct: 137 FRLLNQPSWSPDGRFIVAKKHFTTGRSLGTGEVWVYHVSGGGGVQLVKRASEQLQKELGE 196

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMD------------TRIDRAPKRIGNFRSMILAPR 264
           P ++ + + V Y        +  Y  D                     +      +  P 
Sbjct: 197 PIYAADGKSVFYTRNVTPGPIFEYAQDSNTALFDIERYDLETGEVTTAVSGLGGSVR-PT 255

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----------SASYSPDS 313
            S +GK+     ++     +Y  DL S    ++ + L  ++           + +++PD 
Sbjct: 256 PSPDGKKIAFVRRERTKSKLYVKDLTSGEERKIYDALDQDVQETWAVTGVYPNMAWTPDG 315

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-------------------PVW 354
           + +V  +      ++  +         I    + +                      P W
Sbjct: 316 AAVVVWA----GGKIRRVNVADGASSVIPFKIDDTRVVIDAIHPEVAVAPDRFTTKMPRW 371

Query: 355 ---SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSR 408
              SP G  + F         + +    G + R LV   ED+    P+WS  GR+++F  
Sbjct: 372 ASVSPDGKSVVFETLG----KLWIKSTAGGEARRLVSGDEDAFELYPSWSRDGRTIVFVS 427

Query: 409 KKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
             D   G +L ++   G   + +I  P +   P++  
Sbjct: 428 WTDAGLG-RLRTVPAAGGVGKDVIAQPGHYGAPRFSP 463


>gi|221233054|ref|YP_002515490.1| TolB protein [Caulobacter crescentus NA1000]
 gi|220962226|gb|ACL93582.1| TolB protein [Caulobacter crescentus NA1000]
          Length = 1115

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 15/169 (8%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           RI       +    S +GK     +  D    IY++ +      R+   L  +    +SP
Sbjct: 66  RISVDNGTWMNVDVSRDGKLIAFDILGD----IYTMPITGGTPTRIAEGLAYDQQPRFSP 121

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKF 366
           D  +I F SDR G + ++VM  +G D++++++++      P WSP G  I       T  
Sbjct: 122 DGKRIAFTSDRGGGDNIWVMNLDGGDKRQVTKEEFRLLNQPSWSPDGRFIVAKKHFTTGR 181

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRK 409
           S     + V    G     LV+ ++ Q       P ++  G+S+ ++R 
Sbjct: 182 SLGTGEVWVYHVSGGGGVQLVKRASEQLQKELGEPIYAADGKSVFYTRN 230



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 55/236 (23%), Positives = 94/236 (39%), Gaps = 32/236 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + +A+    D     +Y M       P RI    +    PRFS +GKR   +  + 
Sbjct: 80  SRDGKLIAFDILGD-----IYTMPI-TGGTPTRIAEGLAYDQQPRFSPDGKRIAFTSDRG 133

Query: 280 EAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV----FESDRE-GKEQLYVMQS 333
              +I+ ++L      ++T   F  ++  S+SPD   IV    F + R  G  +++V   
Sbjct: 134 GGDNIWVMNLDGGDKRQVTKEEFRLLNQPSWSPDGRFIVAKKHFTTGRSLGTGEVWVYHV 193

Query: 334 NGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKF-------------SGEKFAIGVM 376
           +G       KR S+  +    +P+++  G  + +T+              +   F I   
Sbjct: 194 SGGGGVQLVKRASEQLQKELGEPIYAADGKSVFYTRNVTPGPIFEYAQDSNTALFDIERY 253

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             +  +    V        PT SP G+ + F R++   T SKLY  DL    E  I
Sbjct: 254 DLETGEVTTAVSGLGGSVRPTPSPDGKKIAFVRRE--RTKSKLYVKDLTSGEERKI 307



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 110/325 (33%), Gaps = 70/325 (21%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATY 231
           RI F S+          + VM+ DG + R +T    ++L +P +SP+ + +     + T 
Sbjct: 125 RIAFTSDRGGGDN----IWVMNLDGGDKRQVTKEEFRLLNQPSWSPDGRFIVAKKHFTTG 180

Query: 232 DDEDILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRALISVQKDEAM----- 282
                  V++         + +       +  +  P ++++GK    +            
Sbjct: 181 RSLGTGEVWVYHVSGGGGVQLVKRASEQLQKELGEPIYAADGKSVFYTRNVTPGPIFEYA 240

Query: 283 --------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                   DI   DL++       + L  ++  + SPD  +I F      K +LYV    
Sbjct: 241 QDSNTALFDIERYDLETGEVTTAVSGLGGSVRPTPSPDGKKIAFVRRERTKSKLYVKDLT 300

Query: 335 GSDQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++++I          +      Y +  W+P G  +    ++G K    V   DG+   
Sbjct: 301 SGEERKIYDALDQDVQETWAVTGVYPNMAWTPDGAAVVV--WAGGKIR-RVNVADGASSV 357

Query: 385 LLV--------------------EDSNLQAPTW---SPSGRSLIFSRKKDGDTGSKLYSI 421
           +                      +    + P W   SP G+S++F      +T  KL+  
Sbjct: 358 IPFKIDDTRVVIDAIHPEVAVAPDRFTTKMPRWASVSPDGKSVVF------ETLGKLWIK 411

Query: 422 DLNGRNETLINTPAYASD---PQWV 443
              G     + +    +    P W 
Sbjct: 412 STAGGEARRLVSGDEDAFELYPSWS 436



 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 90/243 (37%), Gaps = 28/243 (11%)

Query: 216 EPRF---SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKR 271
            PR+   SP+ + V + T       ++++  T    A + + G+  +  L P +S +G+ 
Sbjct: 387 MPRWASVSPDGKSVVFETLG-----KLWIKSTAGGEARRLVSGDEDAFELYPSWSRDGRT 441

Query: 272 ALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK----- 325
            +     D     + +V       + +        +  +SPD   IVFE  R G      
Sbjct: 442 IVFVSWTDAGLGRLRTVPAAGGVGKDVIAQPGHYGAPRFSPDGKTIVFERRRGGGLTSGR 501

Query: 326 ----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 +Y + + G    R+S+       +P +    D +     SG+K  +     +G 
Sbjct: 502 WSQDPGIYRVAAAGGTPVRVSRGG----SEPQFGAANDRVFMLMSSGDKRQLVSTDLNGQ 557

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNGRNETLINTPAY 436
             R+      +     SP GR++ F +  +        G++  ++D  G    +    A 
Sbjct: 558 ARRVHASGDMVNDFQVSPDGRNVAFRQNYEAFVMPLMPGTQEVAVDQKGGALPVTRVSAE 617

Query: 437 ASD 439
            ++
Sbjct: 618 GAE 620



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 89/271 (32%), Gaps = 29/271 (10%)

Query: 160 DDIYQSITGEKGDFNSRI---LFVSESVVSGIIKN--SLCV-MDRDGANIRYLTPSRDQI 213
           D I+  +      F +++     VS    S + +    L +     G   R ++   D  
Sbjct: 370 DAIHPEVAVAPDRFTTKMPRWASVSPDGKSVVFETLGKLWIKSTAGGEARRLVSGDEDAF 429

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
              P +S + + + + ++ D  + R+  +        K +        APRFS +GK  +
Sbjct: 430 ELYPSWSRDGRTIVFVSWTDAGLGRLRTVP-AAGGVGKDVIAQPGHYGAPRFSPDGKTIV 488

Query: 274 ISVQKDEA---------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
              ++              IY V        R++          +   + ++        
Sbjct: 489 FERRRGGGLTSGRWSQDPGIYRVAAAGGTPVRVSRGGS---EPQFGAANDRVFMLMSSGD 545

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVM 376
           K QL     NG   +R+    +    D   SP G  +AF +               + V 
Sbjct: 546 KRQLVSTDLNG-QARRVHASGDM-VNDFQVSPDGRNVAFRQNYEAFVMPLMPGTQEVAVD 603

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +K G+     V     +   WS  G+ + +S
Sbjct: 604 QKGGALPVTRVSAEGAEFIHWSRDGKQVHWS 634



 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 84/276 (30%), Gaps = 38/276 (13%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            I+ + G + +  +     +++  I   +  M   G     +         +PRFSP+ +
Sbjct: 66  RISVDNGTWMNVDVSRDGKLIAFDILGDIYTMPITGGTPTRIAEGL-AYDQQPRFSPDGK 124

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD- 279
           ++A+ + D      +++M+       +       ++  P +S +G+  +     +  +  
Sbjct: 125 RIAFTS-DRGGGDNIWVMNLDGGDKRQVTKEEFRLLNQPSWSPDGRFIVAKKHFTTGRSL 183

Query: 280 EAMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFESDREGKE-------- 326
              +++   +      +L                Y+ D   + +  +             
Sbjct: 184 GTGEVWVYHVSGGGGVQLVKRASEQLQKELGEPIYAADGKSVFYTRNVTPGPIFEYAQDS 243

Query: 327 -----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 +        +          S   P  SP G  IAF +    K  + V      
Sbjct: 244 NTALFDIERYDLETGEVTTAVSGLGGSVR-PTPSPDGKKIAFVRRERTKSKLYVKDLTSG 302

Query: 382 QERLLVE------------DSNLQAPTWSPSGRSLI 405
           +ER + +                    W+P G +++
Sbjct: 303 EERKIYDALDQDVQETWAVTGVYPNMAWTPDGAAVV 338



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 104/269 (38%), Gaps = 48/269 (17%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRI----------DRAPKRIGNFRSMILAPRF 265
            P  SP+ +K+A+   +     ++Y+ D             D+  +       +     +
Sbjct: 272 RPTPSPDGKKIAFVRRERTKS-KLYVKDLTSGEERKIYDALDQDVQETWAVTGVYPNMAW 330

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSN-------ATERLTNTLFINIS----------AS 308
           + +G  A++     +   +   D  S+        T  + + +   ++            
Sbjct: 331 TPDGA-AVVVWAGGKIRRVNVADGASSVIPFKIDDTRVVIDAIHPEVAVAPDRFTTKMPR 389

Query: 309 Y---SPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFT 364
           +   SPD   +VFE+      +L++  + G + +R+ S D++A    P WS  G  I F 
Sbjct: 390 WASVSPDGKSVVFET----LGKLWIKSTAGGEARRLVSGDEDAFELYPSWSRDGRTIVFV 445

Query: 365 KFSG-EKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS------ 416
            ++      +  +   G   + ++ +  +  AP +SP G++++F R++ G   S      
Sbjct: 446 SWTDAGLGRLRTVPAAGGVGKDVIAQPGHYGAPRFSPDGKTIVFERRRGGGLTSGRWSQD 505

Query: 417 -KLYSIDLNGRNETLINTPAYASDPQWVG 444
             +Y +   G     ++     S+PQ+  
Sbjct: 506 PGIYRVAAAGGTPVRVSRGG--SEPQFGA 532



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 49/337 (14%), Positives = 105/337 (31%), Gaps = 65/337 (19%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGI--IKNSLCVMDRDGANIRYLTPSRDQILFE---- 216
           ++ +       + R +   +   +G       + V    G     L     + L +    
Sbjct: 156 FRLLNQPSWSPDGRFIVAKKHFTTGRSLGTGEVWVYHVSGGGGVQLVKRASEQLQKELGE 215

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMD------------TRIDRAPKRIGNFRSMILAPR 264
           P ++ + + V Y        +  Y  D                     +      +  P 
Sbjct: 216 PIYAADGKSVFYTRNVTPGPIFEYAQDSNTALFDIERYDLETGEVTTAVSGLGGSVR-PT 274

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----------SASYSPDS 313
            S +GK+     ++     +Y  DL S    ++ + L  ++           + +++PD 
Sbjct: 275 PSPDGKKIAFVRRERTKSKLYVKDLTSGEERKIYDALDQDVQETWAVTGVYPNMAWTPDG 334

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-------------------PVW 354
           + +V  +      ++  +         I    + +                      P W
Sbjct: 335 AAVVVWA----GGKIRRVNVADGASSVIPFKIDDTRVVIDAIHPEVAVAPDRFTTKMPRW 390

Query: 355 ---SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSR 408
              SP G  + F         + +    G + R LV   ED+    P+WS  GR+++F  
Sbjct: 391 ASVSPDGKSVVFETLG----KLWIKSTAGGEARRLVSGDEDAFELYPSWSRDGRTIVFVS 446

Query: 409 KKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
             D   G +L ++   G   + +I  P +   P++  
Sbjct: 447 WTDAGLG-RLRTVPAAGGVGKDVIAQPGHYGAPRFSP 482


>gi|332995298|gb|AEF05353.1| amidohydrolase [Alteromonas sp. SN2]
          Length = 1111

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/257 (20%), Positives = 97/257 (37%), Gaps = 43/257 (16%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS-----SNGKRALISVQKDEA 281
            +A  D +    +      +   P  +           +S      NGK  +     D  
Sbjct: 25  THAADDIKKDATINEEKWDVSNPPFALNEVTINTTETTWSSLDIAPNGKYMVF----DML 80

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIY V++       +T     NI  S SPD S+I F SDR+G   L++M SNG + +++
Sbjct: 81  GDIYKVNIDGGDATPITQDFAWNIHPSISPDGSKIAFISDRDGINNLWIMDSNGENLRQV 140

Query: 342 SQDKEASYFDPVWSPQGDLI-----AFTKFSGEKFAIGVMKKDGSQERLL-------VED 389
           +++K      P WSP G+ +       +  S     I +    G     +        + 
Sbjct: 141 TKEKNNLIHSPKWSPDGEYLLVSKGIMSSRSIPAGEIWMYHNTGGDGLQIKARNHGKKDQ 200

Query: 390 SNLQAPTWSPSGRSLIFSRK--------KDGDTGSKLYSID------------LNGRNET 429
            N+  P +S  G+ + F+           + D    +++I             ++G    
Sbjct: 201 QNIADPVFSHDGKHIYFTENTVPGSRFDYNRDPLGGIFAITRFDRENGDESRYISGTGGA 260

Query: 430 LINTPAYASDPQWVGFM 446
           ++ TP  + D ++V F+
Sbjct: 261 VVPTP--SPDGKYVAFV 275



 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 52/379 (13%), Positives = 124/379 (32%), Gaps = 101/379 (26%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            + +I+ SI+ +     S+I F+S+        N+L +MD +G N+R +T  ++ ++  P
Sbjct: 100 FAWNIHPSISPDG----SKIAFISDRDG----INNLWIMDSNGENLRQVTKEKNNLIHSP 151

Query: 218 RFSPNQQKVA----YATYDDEDILRVYLMDTRIDRAPKRIGNFRS-----MILAPRFSSN 268
           ++SP+ + +       +        +++         +             I  P FS +
Sbjct: 152 KWSPDGEYLLVSKGIMSSRSIPAGEIWMYHNTGGDGLQIKARNHGKKDQQNIADPVFSHD 211

Query: 269 GKRALIS----------VQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQ 315
           GK    +            +D    I+++   D ++    R  +     +  + SPD   
Sbjct: 212 GKHIYFTENTVPGSRFDYNRDPLGGIFAITRFDRENGDESRYISGTGGAVVPTPSPDGKY 271

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRIS----------QDKEASYFDPVWSPQGDLIAF-- 363
           + F    + K  L++      ++  ++             E  +    W P    I +  
Sbjct: 272 VAFVRRVKEKTALFLKDIKTGEETPLTTELERDMQEGFGSEGYFAYFDWMPDSSAIVYWT 331

Query: 364 ----------------------------------TKFSGEKFAIGV-----MKKDG---- 380
                                                + ++F + +     M  DG    
Sbjct: 332 GGTFHSINIDDKTISDININVEATLQYADALRFDVDVAPDEFDVNMIRWSQMSPDGKTLL 391

Query: 381 --------------SQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                          + + L + ++     P +S  G++++++   D + GS        
Sbjct: 392 FQALGKLYVKDVKSGKMKRLTKQNDHGEYYPRFSNDGKAIVYTTWNDDELGSVRIVSARG 451

Query: 425 GRNETLINTPAYASDPQWV 443
           G+ + +   P +  +P + 
Sbjct: 452 GKGKVITKQPGHYIEPSFS 470



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 94/275 (34%), Gaps = 44/275 (16%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRV-----------------YLMDTRIDRAPK 251
             +       + P+   + Y T      + +                 Y    R D    
Sbjct: 310 GSEGYFAYFDWMPDSSAIVYWTGGTFHSINIDDKTISDININVEATLQYADALRFDVDVA 369

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYS 310
                 +MI   + S +GK  L          +Y  D++S   +RLT           +S
Sbjct: 370 PDEFDVNMIRWSQMSPDGKTLLFQA----LGKLYVKDVKSGKMKRLTKQNDHGEYYPRFS 425

Query: 311 PDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            D   IV+ + + +    + ++ + G   K I++ +   Y +P +S   + + + KF+G 
Sbjct: 426 NDGKAIVYTTWNDDELGSVRIVSARGGKGKVITK-QPGHYIEPSFSSDREKVVYRKFTGG 484

Query: 370 ---------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD--TGSKL 418
                       I V   D   E+ + +      P ++     + F+    G     ++L
Sbjct: 485 YLLDPKYSVDPGIYVADLDRKTEKKVSDGG--INPHFADDNSRVYFTESVGGTPYRETQL 542

Query: 419 YSIDLNGRNETLINTPAY-------ASDPQWVGFM 446
            S++L G ++      A        + D +WV F+
Sbjct: 543 SSVNLQGNDKRTHLYGADDVSEYKLSHDKKWVAFV 577


>gi|294506198|ref|YP_003570256.1| hypothetical protein SRM_00383 [Salinibacter ruber M8]
 gi|294342526|emb|CBH23304.1| Conserved hypothetical protein [Salinibacter ruber M8]
          Length = 1072

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 53/299 (17%), Positives = 108/299 (36%), Gaps = 32/299 (10%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  Y  + G   D  +     +       +       D  G  +     +  +I   P  
Sbjct: 256 DSAYVELFGVSADSLTNEWAEATRETYEPLMKGRTPPDSAGQTVLAPETNGGRINIAPSL 315

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS---------MILAPRFSSNGK 270
           SP+ + VA+ +  +     +Y+ D         +    +         +  +  +S +G+
Sbjct: 316 SPDGRYVAFISERELFSFNLYVADAETGEVIAELDRAGTTGHFNALRFISSSGTWSPDGR 375

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----SASYSPDSSQIVFESDREGK 325
           R      +D    I   ++     ER   +  ++      + ++SPD +++ F     G 
Sbjct: 376 RLAFVSSEDGDNQITVWNVVDEEIER---SFSVDGVTSMKNPAWSPDGARLAFAGTDGGI 432

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----------KFAIGV 375
             LYV+       ++++ D+ A    P W+P G+ IAF     E             +G+
Sbjct: 433 SDLYVLNLETESVRQLTNDRYADL-QPTWAPDGETIAFATDRAETNLETLSPSSNMDLGL 491

Query: 376 MKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +     +   R    D+    P ++P G+SL F   +DG     +Y +DL+  +   + 
Sbjct: 492 VDVSSGEVTVRAPFGDALHHNPQFAPDGQSLYFISDQDG--FKDVYRMDLSSGDRFRVT 548



 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 29/222 (13%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNAT-----ERLTNT-----LF 302
            N   + +AP  S +G+      +++  + ++Y  D ++           T        F
Sbjct: 304 TNGGRINIAPSLSPDGRYVAFISERELFSFNLYVADAETGEVIAELDRAGTTGHFNALRF 363

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLI 361
           I+ S ++SPD  ++ F S  +G  Q+ V      + +R  S D   S  +P WSP G  +
Sbjct: 364 ISSSGTWSPDGRRLAFVSSEDGDNQITVWNVVDEEIERSFSVDGVTSMKNPAWSPDGARL 423

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKK--------DG 412
           AF    G    + V+  +    R L  D      PTW+P G ++ F+  +          
Sbjct: 424 AFAGTDGGISDLYVLNLETESVRQLTNDRYADLQPTWAPDGETIAFATDRAETNLETLSP 483

Query: 413 DTGSKLYSIDLNGRNETLI--------NTPAYASDPQWVGFM 446
            +   L  +D++    T+         + P +A D Q + F+
Sbjct: 484 SSNMDLGLVDVSSGEVTVRAPFGDALHHNPQFAPDGQSLYFI 525



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 25/209 (11%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANI------------RYLTPSRDQILFEPR 218
           G FN+     S    S   +    V   DG N             R  +      +  P 
Sbjct: 356 GHFNALRFISSSGTWSPDGRRLAFVSSEDGDNQITVWNVVDEEIERSFSVDGVTSMKNPA 415

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---- 274
           +SP+  ++A+A  D   I  +Y+++   +   +++ N R   L P ++ +G+        
Sbjct: 416 WSPDGARLAFAGTD-GGISDLYVLNLETES-VRQLTNDRYADLQPTWAPDGETIAFATDR 473

Query: 275 ------SVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                 ++     MD+  VD+ S     R      ++ +  ++PD   + F SD++G + 
Sbjct: 474 AETNLETLSPSSNMDLGLVDVSSGEVTVRAPFGDALHHNPQFAPDGQSLYFISDQDGFKD 533

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +Y M  +  D+ R+++ K         SP
Sbjct: 534 VYRMDLSSGDRFRVTRLKTGVSGITALSP 562


>gi|294817300|ref|ZP_06775942.1| Amidohydrolase [Streptomyces clavuligerus ATCC 27064]
 gi|294322115|gb|EFG04250.1| Amidohydrolase [Streptomyces clavuligerus ATCC 27064]
          Length = 1047

 Score =  127 bits (319), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 92/247 (37%), Gaps = 32/247 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + +++        ++  +     R       +         P  S +G+   ++  +   
Sbjct: 77  DGRRLV------AEVQNILWSLDRDGSPAVPLTPPDLEPTRPVISPDGREVAMAAYRGGF 130

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------QLYVMQSNG 335
             I+ +    +   RLT   F +   S+SPD ++I F S+R G        +++ +    
Sbjct: 131 FSIWVMRTDGSRLRRLTGGPFDDRGPSWSPDGTRIAFSSERGGDPVAGSPYRIWTVNVRD 190

Query: 336 SDQKRIS---------QDKEASYFDPVWSPQGDLIAFTKFSGE-----KFAIGVMKKDGS 381
               R++         QD     FDPVWS  G  + F +            I  +  DG 
Sbjct: 191 GGLTRLTGLPGQQGPAQDGPWEDFDPVWSADGSRVLFVRGRFTAPALVSRTIASVPADGG 250

Query: 382 QERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              ++ E    + NL  P  SP+GR+  + R   G    +  ++ ++G    L    A A
Sbjct: 251 GGPVVTEHTATEGNLLTPAVSPAGRT-AWLRSVPGPARPETITLFVDGEPVALDGDLAPA 309

Query: 438 SDPQWVG 444
             P+W+G
Sbjct: 310 P-PRWIG 315



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 86/239 (35%), Gaps = 26/239 (10%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +N L  +DRDG+    LTP  D     P  SP+ ++VA A Y       +++M T   R 
Sbjct: 86  QNILWSLDRDGSPAVPLTP-PDLEPTRPVISPDGREVAMAAYR-GGFFSIWVMRTDGSRL 143

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAM------DIYSVDLQSNATERLT----- 298
            +R+         P +S +G R   S ++           I++V+++     RLT     
Sbjct: 144 -RRLTGGPFDDRGPSWSPDGTRIAFSSERGGDPVAGSPYRIWTVNVRDGGLTRLTGLPGQ 202

Query: 299 -----NTLFINISASYSPDSSQIVFESDREGKEQLY-----VMQSNGSDQKRIS--QDKE 346
                +  + +    +S D S+++F   R     L       + ++G     ++     E
Sbjct: 203 QGPAQDGPWEDFDPVWSADGSRVLFVRGRFTAPALVSRTIASVPADGGGGPVVTEHTATE 262

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +   P  SP G         G      +      +   L  D     P W    + LI
Sbjct: 263 GNLLTPAVSPAGRTAWLRSVPGPARPETITLFVDGEPVALDGDLAPAPPRWIGDEQLLI 321



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 85/253 (33%), Gaps = 39/253 (15%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKR 271
           +  P+ SP+ + VA+A       L           AP+RI   +  + I  P ++ +G+ 
Sbjct: 372 VHLPQLSPDGRTVAFA------ALNSLWTVRASGGAPRRIVRSSPTAYIQGPVWTPDGRA 425

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            + +  +D    +   DL       L     +      SPD +++    D  G   +  +
Sbjct: 426 LIYTDDRDGLNAVRRRDLADGTETVLAAGGRVQGVP--SPDGTRLA-CLDMAGNLVVRDL 482

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-------TKFSGEKFAIGVMKKDGSQER 384
            +        +         P WSP G  IA         +F      I ++       R
Sbjct: 483 AAGTERTLVAALGAGGLPGRPSWSPDGRWIALCDRNRLNHRFREGHNLIRIVDAATGASR 542

Query: 385 L-------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL------NGRNETLI 431
           L        + D     P WSP GR L    +      S L+ + +      +G    L 
Sbjct: 543 LHGMGPYVSLSDRYASGPVWSPDGRWLACVSE------SALWLLPVGPDGVPSGEARRLN 596

Query: 432 NTPAYASDPQWVG 444
           + PA    P W G
Sbjct: 597 DEPAD--HPSWSG 607



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 58/302 (19%), Positives = 100/302 (33%), Gaps = 41/302 (13%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-PRFSPN 222
           +     +G    ++       V+    NSL  +   G   R +  S      + P ++P+
Sbjct: 364 ERPRPVRGVHLPQLS-PDGRTVAFAALNSLWTVRASGGAPRRIVRSSPTAYIQGPVWTPD 422

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + + Y   DD D L         D     +     +   P  S +G R       D A 
Sbjct: 423 GRALIYT--DDRDGLNAVRRRDLADGTETVLAAGGRVQGVP--SPDGTRLAC---LDMAG 475

Query: 283 DIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFE-------SDREGKEQLYVMQ 332
           ++   DL +     L   L    +    S+SPD   I            REG   + ++ 
Sbjct: 476 NLVVRDLAAGTERTLVAALGAGGLPGRPSWSPDGRWIALCDRNRLNHRFREGHNLIRIVD 535

Query: 333 SNGSDQK-----RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV--MKKDG---SQ 382
           +     +           +     PVWSP G  +A    S    A+ +  +  DG    +
Sbjct: 536 AATGASRLHGMGPYVSLSDRYASGPVWSPDGRWLACVSES----ALWLLPVGPDGVPSGE 591

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASD 439
            R L ++     P+WS + R+L++          +L  ID +GR       +        
Sbjct: 592 ARRLNDEPAD-HPSWSGNSRTLLYQSN----GRLRLLGIDASGRPAGAPRTVPVSLDVRR 646

Query: 440 PQ 441
           P 
Sbjct: 647 PA 648



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 57/361 (15%), Positives = 112/361 (31%), Gaps = 59/361 (16%)

Query: 130 LWDVKDRKQIIGKKFFSSPASW-RKIAHTISD----DIYQSITGEKGDFNSRILFVSESV 184
           +W     + +  +  F++PA   R IA   +D     +    T  +G+  +  +  +   
Sbjct: 217 VWSADGSRVLFVRGRFTAPALVSRTIASVPADGGGGPVVTEHTATEGNLLTPAVSPAGRT 276

Query: 185 -----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-----YATYDDE 234
                V G  +     +  DG     +    D     PR+  ++Q +      +      
Sbjct: 277 AWLRSVPGPARPETITLFVDGEP---VALDGDLAPAPPRWIGDEQLLITLGGQFQIIRPH 333

Query: 235 DILRVYLMDTRIDRAPKRIG-------------NFRSMILAPRFSSNGKRALISVQKDEA 281
                 L+        +R                    +  P+ S +G+    +      
Sbjct: 334 RERTGTLVPLDATLRVRRPAYTVKTYALEAERPRPVRGVHLPQLSPDGRTVAFAA----L 389

Query: 282 MDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             +++V     A  R+  +          ++PD   +++  DR+G   +         + 
Sbjct: 390 NSLWTVRASGGAPRRIVRSSPTAYIQGPVWTPDGRALIYTDDRDGLNAVRRRDLADGTET 449

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAP 395
            ++          V SP G  +A    +G    + V       ER LV           P
Sbjct: 450 VLAAGGR---VQGVPSPDGTRLACLDMAG---NLVVRDLAAGTERTLVAALGAGGLPGRP 503

Query: 396 TWSPSGRSLIFS-------RKKDGDTGSKLYSI-----DLNGRNETLINTPAYASDPQWV 443
           +WSP GR +          R ++G    ++         L+G    +  +  YAS P W 
Sbjct: 504 SWSPDGRWIALCDRNRLNHRFREGHNLIRIVDAATGASRLHGMGPYVSLSDRYASGPVWS 563

Query: 444 G 444
            
Sbjct: 564 P 564



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 100/303 (33%), Gaps = 63/303 (20%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-----ILRVYLMDTRI 246
           S+ VM  DG+ +R LT         P +SP+  ++A+++    D       R++ ++ R 
Sbjct: 132 SIWVMRTDGSRLRRLT-GGPFDDRGPSWSPDGTRIAFSSERGGDPVAGSPYRIWTVNVRD 190

Query: 247 DRAPKRIG---------NFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSN 292
               +  G         +       P +S++G R L    +  A       I SV     
Sbjct: 191 GGLTRLTGLPGQQGPAQDGPWEDFDPVWSADGSRVLFVRGRFTAPALVSRTIASVPADGG 250

Query: 293 ATERLTNTLFINIS---ASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEAS 348
               +T       +    + SP        S     + +   +  +G     ++ D + +
Sbjct: 251 GGPVVTEHTATEGNLLTPAVSPAGRTAWLRSVPGPARPETITLFVDGEP---VALDGDLA 307

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTW---------- 397
              P W     L+      G +F I    ++       L     ++ P +          
Sbjct: 308 PAPPRWIGDEQLLI---TLGGQFQIIRPHRERTGTLVPLDATLRVRRPAYTVKTYALEAE 364

Query: 398 -------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI--NTP-AYASDPQ 441
                        SP GR++ F+        + L+++  +G     I  ++P AY   P 
Sbjct: 365 RPRPVRGVHLPQLSPDGRTVAFAA------LNSLWTVRASGGAPRRIVRSSPTAYIQGPV 418

Query: 442 WVG 444
           W  
Sbjct: 419 WTP 421



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 55/309 (17%), Positives = 100/309 (32%), Gaps = 51/309 (16%)

Query: 175 SRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSR--DQILFEPRFSPNQQKVAYATY 231
           SR+LFV        ++  ++  +  DG     +T     +  L  P  SP  +       
Sbjct: 223 SRVLFVRGRFTAPALVSRTIASVPADGGGGPVVTEHTATEGNLLTPAVSPAGRTAW--LR 280

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-----------QKDE 280
                 R   +   +D  P  + +       PR+  + ++ LI++           ++  
Sbjct: 281 SVPGPARPETITLFVDGEPVAL-DGDLAPAPPRWIGD-EQLLITLGGQFQIIRPHRERTG 338

Query: 281 AMDIYSVDLQSNATERLTNTLFINIS----------ASYSPDSSQIVFESDREGKEQLYV 330
            +      L+         T  +                SPD   + F +       L+ 
Sbjct: 339 TLVPLDATLRVRRPAYTVKTYALEAERPRPVRGVHLPQLSPDGRTVAFAA----LNSLWT 394

Query: 331 MQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++++G   +RI +    +Y   PVW+P G  + +T       A+         E +L   
Sbjct: 395 VRASGGAPRRIVRSSPTAYIQGPVWTPDGRALIYTDDRDGLNAVRRRDLADGTETVLAAG 454

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET----------LINTPAYAS 438
             +Q  P  SP G  L        D    L   DL    E           L   P+++ 
Sbjct: 455 GRVQGVP--SPDGTRLACL-----DMAGNLVVRDLAAGTERTLVAALGAGGLPGRPSWSP 507

Query: 439 DPQWVGFMD 447
           D +W+   D
Sbjct: 508 DGRWIALCD 516


>gi|254388227|ref|ZP_05003463.1| amidohydrolase [Streptomyces clavuligerus ATCC 27064]
 gi|197701950|gb|EDY47762.1| amidohydrolase [Streptomyces clavuligerus ATCC 27064]
          Length = 1045

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 92/247 (37%), Gaps = 32/247 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + +++        ++  +     R       +         P  S +G+   ++  +   
Sbjct: 161 DGRRLV------AEVQNILWSLDRDGSPAVPLTPPDLEPTRPVISPDGREVAMAAYRGGF 214

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------QLYVMQSNG 335
             I+ +    +   RLT   F +   S+SPD ++I F S+R G        +++ +    
Sbjct: 215 FSIWVMRTDGSRLRRLTGGPFDDRGPSWSPDGTRIAFSSERGGDPVAGSPYRIWTVNVRD 274

Query: 336 SDQKRIS---------QDKEASYFDPVWSPQGDLIAFTKFSGE-----KFAIGVMKKDGS 381
               R++         QD     FDPVWS  G  + F +            I  +  DG 
Sbjct: 275 GGLTRLTGLPGQQGPAQDGPWEDFDPVWSADGSRVLFVRGRFTAPALVSRTIASVPADGG 334

Query: 382 QERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              ++ E    + NL  P  SP+GR+  + R   G    +  ++ ++G    L    A A
Sbjct: 335 GGPVVTEHTATEGNLLTPAVSPAGRT-AWLRSVPGPARPETITLFVDGEPVALDGDLAPA 393

Query: 438 SDPQWVG 444
             P+W+G
Sbjct: 394 P-PRWIG 399



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 86/239 (35%), Gaps = 26/239 (10%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +N L  +DRDG+    LTP  D     P  SP+ ++VA A Y       +++M T   R 
Sbjct: 170 QNILWSLDRDGSPAVPLTP-PDLEPTRPVISPDGREVAMAAYR-GGFFSIWVMRTDGSRL 227

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAM------DIYSVDLQSNATERLT----- 298
            +R+         P +S +G R   S ++           I++V+++     RLT     
Sbjct: 228 -RRLTGGPFDDRGPSWSPDGTRIAFSSERGGDPVAGSPYRIWTVNVRDGGLTRLTGLPGQ 286

Query: 299 -----NTLFINISASYSPDSSQIVFESDREGKEQLY-----VMQSNGSDQKRIS--QDKE 346
                +  + +    +S D S+++F   R     L       + ++G     ++     E
Sbjct: 287 QGPAQDGPWEDFDPVWSADGSRVLFVRGRFTAPALVSRTIASVPADGGGGPVVTEHTATE 346

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +   P  SP G         G      +      +   L  D     P W    + LI
Sbjct: 347 GNLLTPAVSPAGRTAWLRSVPGPARPETITLFVDGEPVALDGDLAPAPPRWIGDEQLLI 405



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/253 (20%), Positives = 85/253 (33%), Gaps = 39/253 (15%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKR 271
           +  P+ SP+ + VA+A       L           AP+RI   +  + I  P ++ +G+ 
Sbjct: 456 VHLPQLSPDGRTVAFA------ALNSLWTVRASGGAPRRIVRSSPTAYIQGPVWTPDGRA 509

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            + +  +D    +   DL       L     +      SPD +++    D  G   +  +
Sbjct: 510 LIYTDDRDGLNAVRRRDLADGTETVLAAGGRVQGVP--SPDGTRLA-CLDMAGNLVVRDL 566

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-------TKFSGEKFAIGVMKKDGSQER 384
            +        +         P WSP G  IA         +F      I ++       R
Sbjct: 567 AAGTERTLVAALGAGGLPGRPSWSPDGRWIALCDRNRLNHRFREGHNLIRIVDAATGASR 626

Query: 385 L-------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL------NGRNETLI 431
           L        + D     P WSP GR L    +      S L+ + +      +G    L 
Sbjct: 627 LHGMGPYVSLSDRYASGPVWSPDGRWLACVSE------SALWLLPVGPDGVPSGEARRLN 680

Query: 432 NTPAYASDPQWVG 444
           + PA    P W G
Sbjct: 681 DEPAD--HPSWSG 691



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 58/302 (19%), Positives = 100/302 (33%), Gaps = 41/302 (13%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-PRFSPN 222
           +     +G    ++       V+    NSL  +   G   R +  S      + P ++P+
Sbjct: 448 ERPRPVRGVHLPQLS-PDGRTVAFAALNSLWTVRASGGAPRRIVRSSPTAYIQGPVWTPD 506

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + + Y   DD D L         D     +     +   P  S +G R       D A 
Sbjct: 507 GRALIYT--DDRDGLNAVRRRDLADGTETVLAAGGRVQGVP--SPDGTRLAC---LDMAG 559

Query: 283 DIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFE-------SDREGKEQLYVMQ 332
           ++   DL +     L   L    +    S+SPD   I            REG   + ++ 
Sbjct: 560 NLVVRDLAAGTERTLVAALGAGGLPGRPSWSPDGRWIALCDRNRLNHRFREGHNLIRIVD 619

Query: 333 SNGSDQK-----RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV--MKKDG---SQ 382
           +     +           +     PVWSP G  +A    S    A+ +  +  DG    +
Sbjct: 620 AATGASRLHGMGPYVSLSDRYASGPVWSPDGRWLACVSES----ALWLLPVGPDGVPSGE 675

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASD 439
            R L ++     P+WS + R+L++          +L  ID +GR       +        
Sbjct: 676 ARRLNDEPAD-HPSWSGNSRTLLYQSN----GRLRLLGIDASGRPAGAPRTVPVSLDVRR 730

Query: 440 PQ 441
           P 
Sbjct: 731 PA 732



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 57/361 (15%), Positives = 112/361 (31%), Gaps = 59/361 (16%)

Query: 130 LWDVKDRKQIIGKKFFSSPASW-RKIAHTISD----DIYQSITGEKGDFNSRILFVSESV 184
           +W     + +  +  F++PA   R IA   +D     +    T  +G+  +  +  +   
Sbjct: 301 VWSADGSRVLFVRGRFTAPALVSRTIASVPADGGGGPVVTEHTATEGNLLTPAVSPAGRT 360

Query: 185 -----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-----YATYDDE 234
                V G  +     +  DG     +    D     PR+  ++Q +      +      
Sbjct: 361 AWLRSVPGPARPETITLFVDGEP---VALDGDLAPAPPRWIGDEQLLITLGGQFQIIRPH 417

Query: 235 DILRVYLMDTRIDRAPKRIG-------------NFRSMILAPRFSSNGKRALISVQKDEA 281
                 L+        +R                    +  P+ S +G+    +      
Sbjct: 418 RERTGTLVPLDATLRVRRPAYTVKTYALEAERPRPVRGVHLPQLSPDGRTVAFAA----L 473

Query: 282 MDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             +++V     A  R+  +          ++PD   +++  DR+G   +         + 
Sbjct: 474 NSLWTVRASGGAPRRIVRSSPTAYIQGPVWTPDGRALIYTDDRDGLNAVRRRDLADGTET 533

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAP 395
            ++          V SP G  +A    +G    + V       ER LV           P
Sbjct: 534 VLAAGGR---VQGVPSPDGTRLACLDMAG---NLVVRDLAAGTERTLVAALGAGGLPGRP 587

Query: 396 TWSPSGRSLIFS-------RKKDGDTGSKLYSI-----DLNGRNETLINTPAYASDPQWV 443
           +WSP GR +          R ++G    ++         L+G    +  +  YAS P W 
Sbjct: 588 SWSPDGRWIALCDRNRLNHRFREGHNLIRIVDAATGASRLHGMGPYVSLSDRYASGPVWS 647

Query: 444 G 444
            
Sbjct: 648 P 648



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 100/303 (33%), Gaps = 63/303 (20%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-----ILRVYLMDTRI 246
           S+ VM  DG+ +R LT         P +SP+  ++A+++    D       R++ ++ R 
Sbjct: 216 SIWVMRTDGSRLRRLT-GGPFDDRGPSWSPDGTRIAFSSERGGDPVAGSPYRIWTVNVRD 274

Query: 247 DRAPKRIG---------NFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSN 292
               +  G         +       P +S++G R L    +  A       I SV     
Sbjct: 275 GGLTRLTGLPGQQGPAQDGPWEDFDPVWSADGSRVLFVRGRFTAPALVSRTIASVPADGG 334

Query: 293 ATERLTNTLFINIS---ASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEAS 348
               +T       +    + SP        S     + +   +  +G     ++ D + +
Sbjct: 335 GGPVVTEHTATEGNLLTPAVSPAGRTAWLRSVPGPARPETITLFVDGEP---VALDGDLA 391

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTW---------- 397
              P W     L+      G +F I    ++       L     ++ P +          
Sbjct: 392 PAPPRWIGDEQLLI---TLGGQFQIIRPHRERTGTLVPLDATLRVRRPAYTVKTYALEAE 448

Query: 398 -------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI--NTP-AYASDPQ 441
                        SP GR++ F+        + L+++  +G     I  ++P AY   P 
Sbjct: 449 RPRPVRGVHLPQLSPDGRTVAFAA------LNSLWTVRASGGAPRRIVRSSPTAYIQGPV 502

Query: 442 WVG 444
           W  
Sbjct: 503 WTP 505



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 55/309 (17%), Positives = 100/309 (32%), Gaps = 51/309 (16%)

Query: 175 SRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSR--DQILFEPRFSPNQQKVAYATY 231
           SR+LFV        ++  ++  +  DG     +T     +  L  P  SP  +       
Sbjct: 307 SRVLFVRGRFTAPALVSRTIASVPADGGGGPVVTEHTATEGNLLTPAVSPAGRTAW--LR 364

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-----------QKDE 280
                 R   +   +D  P  + +       PR+  + ++ LI++           ++  
Sbjct: 365 SVPGPARPETITLFVDGEPVAL-DGDLAPAPPRWIGD-EQLLITLGGQFQIIRPHRERTG 422

Query: 281 AMDIYSVDLQSNATERLTNTLFINIS----------ASYSPDSSQIVFESDREGKEQLYV 330
            +      L+         T  +                SPD   + F +       L+ 
Sbjct: 423 TLVPLDATLRVRRPAYTVKTYALEAERPRPVRGVHLPQLSPDGRTVAFAA----LNSLWT 478

Query: 331 MQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++++G   +RI +    +Y   PVW+P G  + +T       A+         E +L   
Sbjct: 479 VRASGGAPRRIVRSSPTAYIQGPVWTPDGRALIYTDDRDGLNAVRRRDLADGTETVLAAG 538

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET----------LINTPAYAS 438
             +Q  P  SP G  L        D    L   DL    E           L   P+++ 
Sbjct: 539 GRVQGVP--SPDGTRLACL-----DMAGNLVVRDLAAGTERTLVAALGAGGLPGRPSWSP 591

Query: 439 DPQWVGFMD 447
           D +W+   D
Sbjct: 592 DGRWIALCD 600


>gi|88802620|ref|ZP_01118147.1| putative protease [Polaribacter irgensii 23-P]
 gi|88781478|gb|EAR12656.1| putative protease [Polaribacter irgensii 23-P]
          Length = 1081

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 15/189 (7%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFE 319
           + P  S  G+RA+   +     +I++V  ++     LTN+  + + S  +SP+  ++ + 
Sbjct: 305 INPNVSPKGERAIFEYRG----EIFTVPKKNGTWRNLTNSSGVADRSPIWSPNGDKVAWF 360

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD  G+ Q+ +   NG++Q+ I       YF P WSP G  IA+T      F I ++   
Sbjct: 361 SDASGEYQMVIADQNGANQETIKLPNPTFYFQPDWSPDGKHIAYT---DTNFVIWILNLK 417

Query: 380 GSQERLLVEDS-----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +   +  D          P WSP    + ++++   +  S +Y+  ++ +    I   
Sbjct: 418 TKKITKVAADGYAHPNRTMNPKWSPDSDWIAYAKQNKNNFKS-IYAYQISTKKTIQITDL 476

Query: 435 -AYASDPQW 442
            A A  P W
Sbjct: 477 IADAITPVW 485



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 91/239 (38%), Gaps = 31/239 (12%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             ++L +P  S  Q  VA+      D+ +V +          R+ +       P FS +G
Sbjct: 20  NTRLLRQPALS--QTTVAFVH--AGDLWKVGI----AGGNAIRLTSDAGSETDPHFSKDG 71

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--- 326
           K    + Q D   DI+ V       +RLT     +++  ++PD  +I+F SDR  K    
Sbjct: 72  KWIAFTAQYDGNTDIFLVSTSGGEPKRLTYHPSNDVAQGWTPDG-KILFRSDRASKPTQT 130

Query: 327 -QLYVMQSNGSDQK----------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              Y + + G   +          +IS+D     + P+ S   +   +    G+   I +
Sbjct: 131 NTFYTVSTAGGMPEAFGIPRAAYGKISEDNTYMAYTPITSWDAEWRNY--RGGQAMPIWI 188

Query: 376 MKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +  +  +       +      P W     ++ +  ++  D  + ++S ++  + E  + 
Sbjct: 189 INLETKELTKTPQKDGERHVNPIWYK--GNVYYISER--DYTANIWSYNIKTKKEEQMT 243



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/329 (17%), Positives = 117/329 (35%), Gaps = 50/329 (15%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            +S    +++ +  S+D+ Q  T      + +ILF S+        N+   +   G    
Sbjct: 90  STSGGEPKRLTYHPSNDVAQGWTP-----DGKILFRSDRASKPTQTNTFYTVSTAGGMPE 144

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYA----------TYDDEDILRVYLMDTRIDRAPKRIG 254
                R       + S +   +AY            Y     + +++++       K   
Sbjct: 145 AFGIPR---AAYGKISEDNTYMAYTPITSWDAEWRNYRGGQAMPIWIINLETKELTKTPQ 201

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                 + P +   G       ++D   +I+S ++++   E++T     ++  +   +S+
Sbjct: 202 KDGERHVNPIW-YKGN-VYYISERDYTANIWSYNIKTKKEEQMTFHKKFDVK-NIDANSN 258

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVW-------------SPQGD 359
           QI++    E    L+++     + K+I  S   + +Y    W             SP+G+
Sbjct: 259 QIIY----EQAGFLHLLNPETKETKQINISVKGDLNYSRTRWMDVPGKKLINPNVSPKGE 314

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSK 417
              F         I  + K     R L   S    ++P WSP+G  + +     G+   +
Sbjct: 315 RAIFEYRG----EIFTVPKKNGTWRNLTNSSGVADRSPIWSPNGDKVAWFSDASGE--YQ 368

Query: 418 LYSIDLNGRNETLI--NTPAYASDPQWVG 444
           +   D NG N+  I    P +   P W  
Sbjct: 369 MVIADQNGANQETIKLPNPTFYFQPDWSP 397



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 57/137 (41%), Gaps = 8/137 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                +  + + D++GAN   +        F+P +SP+ + +AY   +      +++++ 
Sbjct: 361 SDASGEYQMVIADQNGANQETIKLPNPTFYFQPDWSPDGKHIAYTDTN----FVIWILNL 416

Query: 245 RIDRAPKRIGN---FRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNT 300
           +  +  K   +     +  + P++S +      + Q K+    IY+  + +  T ++T+ 
Sbjct: 417 KTKKITKVAADGYAHPNRTMNPKWSPDSDWIAYAKQNKNNFKSIYAYQISTKKTIQITDL 476

Query: 301 LFINISASYSPDSSQIV 317
           +   I+  +      I 
Sbjct: 477 IADAITPVWDASGKYIY 493



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 83/240 (34%), Gaps = 19/240 (7%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +S++ V+ +    L  +   G N   LT S      +P FS + + +A+    D +   +
Sbjct: 29  LSQTTVAFVHAGDLWKVGIAGGNAIRLT-SDAGSETDPHFSKDGKWIAFTAQYDGNT-DI 86

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----DEAMDIYSVDLQSNATE 295
           +L+ T     PKR+    S  +A  ++ +GK  L    +     +    Y+V       E
Sbjct: 87  FLVST-SGGEPKRLTYHPSNDVAQGWTPDGK-ILFRSDRASKPTQTNTFYTVSTAGGMPE 144

Query: 296 RLTNTLF-------INISASYSPDSSQIV-FESDREGKEQ-LYVMQSNGSDQKRISQDKE 346
                          N   +Y+P +S    + + R G+   ++++     +  +  Q   
Sbjct: 145 AFGIPRAAYGKISEDNTYMAYTPITSWDAEWRNYRGGQAMPIWIINLETKELTKTPQKDG 204

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
             + +P+W      + +         I        +E  +             +   +I+
Sbjct: 205 ERHVNPIW--YKGNVYYISERDYTANIWSYNIKTKKEEQMTFHKKFDVKNIDANSNQIIY 262



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 37/101 (36%), Gaps = 8/101 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             +  +  DG        +       P++SP+   +AYA  +  +   +Y       +  
Sbjct: 419 KKITKVAADGY-------AHPNRTMNPKWSPDSDWIAYAKQNKNNFKSIYAYQISTKKTI 471

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           + I +  +  + P + ++GK        D  +    +D+ S
Sbjct: 472 Q-ITDLIADAITPVWDASGKYIYTLASTDYGLQSGWLDMSS 511


>gi|298675402|ref|YP_003727152.1| WD40 domain-containing protein beta Propeller [Methanohalobium
           evestigatum Z-7303]
 gi|298288390|gb|ADI74356.1| WD40 domain protein beta Propeller [Methanohalobium evestigatum
           Z-7303]
          Length = 628

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 63/287 (21%), Positives = 121/287 (42%), Gaps = 28/287 (9%)

Query: 175 SRILFVSESVVSGIIKNS---LCVMDRDGANIRYLTPS----------RDQILFEPRFSP 221
           +R+   +++      ++    L +M+ DG +I+ +              D+++  P +SP
Sbjct: 81  TRLTVHAKNKPEATTRSEIKALYLMEADGFDIKRIAWGECTPYTRKVGNDKLIGLPSWSP 140

Query: 222 NQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALIS- 275
           +     Y + +   + +IL  +L+    +      G+F S  +    ++S +G   L   
Sbjct: 141 DGDVFTYTSEELAKNGNILGEFLIVDADNLNTIEKGSFISNKIDFIKKWSPDGSYLLYRG 200

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +K E    Y +DL  N T R   T +     ++SP  ++I F  + +G E  +V   + 
Sbjct: 201 YKKGEGPKCYLLDLTRNITRRFPITQYNPEDITWSPKGNKIAFLGEDKGNESAFVYNLDN 260

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMK---KDGSQERLLVEDSN 391
            + + I   K +S  +P+WSP G  +AF+K        + V+     +G   +L      
Sbjct: 261 GNLRNIFSTKNSSIHNPLWSPDGRKLAFSKIEDNNVKDVYVIDINVVNGRPYKLTTLHGG 320

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +    W      L+++     D    LYSI +N RN+TL+      S
Sbjct: 321 ILV-EWL-DSEKLLYTEYSPED---NLYSISVNSRNKTLLYNSTNES 362



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 86/235 (36%), Gaps = 34/235 (14%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-------------SVQKDEAMDIYSVDL 289
           DT       R+       +   +S +G RAL+             +  + E   +Y ++ 
Sbjct: 48  DTLDLVNESRLEVDGDPDMYVHWSPDGTRALLLTRLTVHAKNKPEATTRSEIKALYLMEA 107

Query: 290 QSNATERL--------TNTLFIN---ISASYSPDSSQIVFESDREGKE-----QLYVMQS 333
                +R+        T  +  +      S+SPD     + S+   K      +  ++ +
Sbjct: 108 DGFDIKRIAWGECTPYTRKVGNDKLIGLPSWSPDGDVFTYTSEELAKNGNILGEFLIVDA 167

Query: 334 NGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERL-LVEDS 390
           +  +  ++ S       F   WSP G  + +  +  GE     ++    +  R   +   
Sbjct: 168 DNLNTIEKGSFISNKIDFIKKWSPDGSYLLYRGYKKGEGPKCYLLDLTRNITRRFPITQY 227

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           N +  TWSP G  + F  +  G+  + +Y++D NG    + +T  +   +P W  
Sbjct: 228 NPEDITWSPKGNKIAFLGEDKGNESAFVYNLD-NGNLRNIFSTKNSSIHNPLWSP 281


>gi|226226442|ref|YP_002760548.1| hypothetical protein GAU_1036 [Gemmatimonas aurantiaca T-27]
 gi|226089633|dbj|BAH38078.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 1168

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 86/217 (39%), Gaps = 28/217 (12%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +       L+   S +GK+ +     D   D+Y++        R+TN L  +    +SPD
Sbjct: 80  LDTREGTWLSVDISPDGKQIVF----DMLGDLYTMPFAGGEATRITNGLAFDAQPRFSPD 135

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEK 370
              +VF SDR+G + ++ +    ++ K I++ +   Y  P +SP G  I  +   F G  
Sbjct: 136 GKSVVFISDRQGADNVHTIDLATNEIKEITRGRTNVYLSPEYSPDGQYIVASKGSFRGAL 195

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAP---------TWSPSGRSLIFSRKKDG------DTG 415
             + +    G     L       AP         ++SP GR L ++++            
Sbjct: 196 PTLWMYHVRGGSGVSLYTAPANAAPGTAVQQAGASFSPDGRYLWYTQRTGAWHYNAQFPQ 255

Query: 416 SKLYSIDLNGRNETLINT-------PAYASDPQWVGF 445
            ++++ D       + +T       P  + D +W+ +
Sbjct: 256 YQVWTYDRETGEREIQSTRYGSAVRPTVSPDGKWMVY 292



 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 48/251 (19%), Positives = 94/251 (37%), Gaps = 27/251 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y   +R+        SP+ +++ +      D+L              RI N  +    PR
Sbjct: 78  YALDTREGTWLSVDISPDGKQIVF------DMLGDLYTMPFAGGEATRITNGLAFDAQPR 131

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFE--SD 321
           FS +GK  +    +  A +++++DL +N  + +T        S  YSPD   IV    S 
Sbjct: 132 FSPDGKSVVFISDRQGADNVHTIDLATNEIKEITRGRTNVYLSPEYSPDGQYIVASKGSF 191

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASY-------FDPVWSPQGDLIAFTKFSGE----- 369
           R     L++    G     +      +            +SP G  + +T+ +G      
Sbjct: 192 RGALPTLWMYHVRGGSGVSLYTAPANAAPGTAVQQAGASFSPDGRYLWYTQRTGAWHYNA 251

Query: 370 ---KFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              ++ +    ++  + E       +   PT SP G+ +++  + +  TG ++   DL  
Sbjct: 252 QFPQYQVWTYDRETGEREIQSTRYGSAVRPTVSPDGKWMVYGSRYENKTGLRIR--DLAS 309

Query: 426 RNETLINTPAY 436
            +E  +  P  
Sbjct: 310 GDERWLAYPTQ 320



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 96/345 (27%), Gaps = 68/345 (19%)

Query: 144 FFSSPASWRKIAH--TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR--- 198
           +     +W   A         Y   TGE+   ++R        VS   K  +        
Sbjct: 240 YTQRTGAWHYNAQFPQYQVWTYDRETGEREIQSTRYGSAVRPTVSPDGKWMVYGSRYENK 299

Query: 199 DGANIRYLTPSRDQILFEPR------------------FSPN--------QQKVAYATYD 232
            G  IR L    ++ L  P                   F+P+         +K+     D
Sbjct: 300 TGLRIRDLASGDERWLAYPTQRDEMETRAPLDALPGMSFTPDSKEIVASYGKKLWRVAVD 359

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----------SSNGKRALISVQKDEAM 282
               + +             +     +  + +F          S +GK+           
Sbjct: 360 GSGQVEIPFHVKADVAVGPEVSFTYPISDSAQFTVRQIRDGVMSPDGKQLAFIS----LD 415

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y +D  S    R++    I    ++SPD   + + +      +LY          R+ 
Sbjct: 416 KLYVMDWPSGTPRRVSTLNDIEAEPAWSPDGRSLAWVTWANNGGRLYKSAMVAGRATRVL 475

Query: 343 Q--DKEASYFDPVWSPQGDLIAFTKFSGEK---------------FAIGVMKKDGSQERL 385
                  ++  PVWSP G  I   +   +                FA      +G    L
Sbjct: 476 PVSASTGTFRQPVWSPNGARILVLQSGAQGRRDQTGVTGTTQLMWFAANSTSTNGDAGTL 535

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +   +    P +S     +  S          L SI  +G +E  
Sbjct: 536 IARAAGRSKPHFSRDTTRIYLSSNNG------LVSIRWDGTDEQR 574



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 51/331 (15%), Positives = 103/331 (31%), Gaps = 73/331 (22%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGAN-----------IRYLTPSRDQILFEPRFSPNQQK 225
           + F ++   S   K+ + + DR GA+           I+ +T  R  +   P +SP+ Q 
Sbjct: 124 LAFDAQPRFSPDGKSVVFISDRQGADNVHTIDLATNEIKEITRGRTNVYLSPEYSPDGQY 183

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--------ILAPRFSSNGKRALISVQ 277
           +  +       L    M      +   +    +              FS +G+    + +
Sbjct: 184 IVASKGSFRGALPTLWMYHVRGGSGVSLYTAPANAAPGTAVQQAGASFSPDGRYLWYTQR 243

Query: 278 KD--------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
                         +++ D ++   E  +      +  + SPD   +V+ S  E K  L 
Sbjct: 244 TGAWHYNAQFPQYQVWTYDRETGEREIQSTRYGSAVRPTVSPDGKWMVYGSRYENKTGLR 303

Query: 330 VMQSNGSDQKRI---SQDKEASYFDP-------VWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +      D++ +   +Q  E     P        ++P    I    +  + + + V   D
Sbjct: 304 IRDLASGDERWLAYPTQRDEMETRAPLDALPGMSFTPDSKEIV-ASYGKKLWRVAV---D 359

Query: 380 GSQERLL-------------------------VEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           GS +  +                              ++    SP G+ L F        
Sbjct: 360 GSGQVEIPFHVKADVAVGPEVSFTYPISDSAQFTVRQIRDGVMSPDGKQLAFIS------ 413

Query: 415 GSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
             KLY +D  +G    +       ++P W  
Sbjct: 414 LDKLYVMDWPSGTPRRVSTLNDIEAEPAWSP 444



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 114/356 (32%), Gaps = 87/356 (24%)

Query: 115 RVIKEGKDRLRVEFRL-WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           RV  +G  ++ + F +  DV    ++    F             ISD    ++   +   
Sbjct: 355 RVAVDGSGQVEIPFHVKADVAVGPEV---SFTYP----------ISDSAQFTVRQIR--- 398

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
              ++      ++ I  + L VMD      R ++   D I  EP +SP+ + +A+ T+ +
Sbjct: 399 -DGVMSPDGKQLAFISLDKLYVMDWPSGTPRRVSTLND-IEAEPAWSPDGRSLAWVTWAN 456

Query: 234 EDILRVYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRALI-----SVQKD-----EA 281
               R+Y       RA +   +         P +S NG R L+       ++D       
Sbjct: 457 NGG-RLYKSAMVAGRATRVLPVSASTGTFRQPVWSPNGARILVLQSGAQGRRDQTGVTGT 515

Query: 282 MDIYSVDLQS----NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             +      S         L           +S D+++I   S       L  ++ +G+D
Sbjct: 516 TQLMWFAANSTSTNGDAGTLIARAAGRSKPHFSRDTTRIYLSS----NNGLVSIRWDGTD 571

Query: 338 QKR------------------------------ISQDKEASYFDPV----WSPQGD---- 359
           ++R                               + ++  S   P      SP GD    
Sbjct: 572 EQRHLRVVGGGGDGAADDDHAHTDMTVAELELQRTPEEPNSPGPPAQLVMISPNGDVALA 631

Query: 360 ------LIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFS 407
                         G +  + +   + +    R L +    Q P WS  G+ L +S
Sbjct: 632 QINQDFYTVTIPPRGTQATVNIADPNTASFPARKLTDIGG-QFPAWSSDGKRLHWS 686


>gi|254387973|ref|ZP_05003210.1| amidohydrolase [Streptomyces clavuligerus ATCC 27064]
 gi|197701697|gb|EDY47509.1| amidohydrolase [Streptomyces clavuligerus ATCC 27064]
          Length = 1069

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 76/210 (36%), Gaps = 31/210 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G+    S  +D    +++V        R T   + +   ++SPD ++I F S+R
Sbjct: 98  PTHSPDGELVAFSAYRDGNHHLWTVRPDGTGLRRRTEGPWDDRGPAWSPDGTRIAFASER 157

Query: 323 EGKE------QLYVMQSNGSDQKRIS---------QDKEASYFDPVWSPQGDLIAFTKFS 367
            G        +++V+     +  R++         QD     +DP WSP G  I F +  
Sbjct: 158 GGDPATGAPYRIHVLDLRTGNLTRLTGLSGQQGPLQDGPWEDYDPTWSPDGTRILFVRGQ 217

Query: 368 G---------EKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           G         +   +  +   G+           D  + AP  +P GR L + R      
Sbjct: 218 GVTTATGPALDARTVAAVSATGTGAVTTVHTGTADGQIIAPALAPDGRRLAYLRTTPAPR 277

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              +    L+G    +    A    P+W  
Sbjct: 278 AGCVLV--LDGAPVPVTGDLAAVP-PRWTA 304



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 74/221 (33%), Gaps = 39/221 (17%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             A   +  G   +  VQ      ++S+         LT         ++SPD   + F 
Sbjct: 55  NGAASLAPGGGGLIAEVQ----STLWSLPADGGRATPLTPADLEPARPTHSPDGELVAFS 110

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------FAI 373
           + R+G   L+ ++ +G+  +R + +       P WSP G  IAF    G        + I
Sbjct: 111 AYRDGNHHLWTVRPDGTGLRRRT-EGPWDDRGPAWSPDGTRIAFASERGGDPATGAPYRI 169

Query: 374 GVMKKDGSQERLLV-----------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK----- 417
            V+         L                   PTWSP G  ++F R +   T +      
Sbjct: 170 HVLDLRTGNLTRLTGLSGQQGPLQDGPWEDYDPTWSPDGTRILFVRGQGVTTATGPALDA 229

Query: 418 --LYSIDLNGRNET----------LINTPAYASDPQWVGFM 446
             + ++   G               I  PA A D + + ++
Sbjct: 230 RTVAAVSATGTGAVTTVHTGTADGQIIAPALAPDGRRLAYL 270



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 92/244 (37%), Gaps = 33/244 (13%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +++L  +  DG     LTP  D     P  SP+ + VA++ Y D +    +L   R D  
Sbjct: 72  QSTLWSLPADGGRATPLTP-ADLEPARPTHSPDGELVAFSAYRDGN---HHLWTVRPDGT 127

Query: 250 P-KRIGNFRSMILAPRFSSNGKRALISVQKDEAM------DIYSVDLQSNATERLT---- 298
             +R          P +S +G R   + ++           I+ +DL++    RLT    
Sbjct: 128 GLRRRTEGPWDDRGPAWSPDGTRIAFASERGGDPATGAPYRIHVLDLRTGNLTRLTGLSG 187

Query: 299 ------NTLFINISASYSPDSSQIVFESDRE---------GKEQLYVMQSNGSDQKRI-- 341
                 +  + +   ++SPD ++I+F   +              +  + + G+       
Sbjct: 188 QQGPLQDGPWEDYDPTWSPDGTRILFVRGQGVTTATGPALDARTVAAVSATGTGAVTTVH 247

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           +   +     P  +P G  +A+ + +    A  V+  DG+   +   D     P W+  G
Sbjct: 248 TGTADGQIIAPALAPDGRRLAYLRTTPAPRAGCVLVLDGAPVPV-TGDLAAVPPRWTARG 306

Query: 402 RSLI 405
             L+
Sbjct: 307 ELLL 310



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 98/279 (35%), Gaps = 41/279 (14%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +    V + D    R         +  P  SP+  ++A+A  +      ++L  T  +
Sbjct: 338 ARRPRYRVKEYDLGEARVQPVRG---IHLPALSPDGGRIAFAALN-----SLWLAHTNGE 389

Query: 248 RAPKRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           R P+R+    +   +L P +   G+  L +  +D  + I  +DL + A +  T       
Sbjct: 390 RPPRRLRTAPATRYLLGPVWDPAGRSLLYADDRDGLLGIRRLDLATGAEQ--TLAAGGRA 447

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLIAF 363
             + SPD +++    D  G  +L V       ++ ++           P WSP G  IA 
Sbjct: 448 FPALSPDGTRLA-CLDTTG--RLLVRDLVTGAERVLATPLSGGGLPGRPSWSPDGRWIAL 504

Query: 364 T-------KFSGEKFAIGVMKKDGSQERLLV-------EDSNLQAPTWSPSGRSLIFSRK 409
                   +F      + ++      +RL          D +   P WSP G  L     
Sbjct: 505 CDRNRISLRFREGYNLLRIVDAGTGADRLHTVAPHTSISDRHASGPVWSPDGAWLAVVV- 563

Query: 410 KDGDTGSKLYSIDLNGRN----ETLINTPAYASDPQWVG 444
              ++   L  +  +G        L + PA    P W G
Sbjct: 564 ---ESALCLLPVAPDGTPTGPLRPLTDEPAD--HPSWSG 597



 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 94/272 (34%), Gaps = 38/272 (13%)

Query: 191 NSLCVMDRDGANI--RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           NSL +   +G     R  T    + L  P + P  + + YA  D + +L +  +D     
Sbjct: 379 NSLWLAHTNGERPPRRLRTAPATRYLLGPVWDPAGRSLLYAD-DRDGLLGIRRLDLATGA 437

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINI 305
                   R+    P  S +G R       D    +   DL + A   L        +  
Sbjct: 438 EQTLAAGGRAF---PALSPDGTRLAC---LDTTGRLLVRDLVTGAERVLATPLSGGGLPG 491

Query: 306 SASYSPDSSQIVFE-------SDREGKEQLYVMQSNGSDQKRI------SQDKEASYFDP 352
             S+SPD   I            REG   L ++ + G+   R+      +   +     P
Sbjct: 492 RPSWSPDGRWIALCDRNRISLRFREGYNLLRIVDA-GTGADRLHTVAPHTSISDRHASGP 550

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           VWSP G  +A          +  +  DG      R L ++     P+WS    +L++   
Sbjct: 551 VWSPDGAWLAVV--VESALCLLPVAPDGTPTGPLRPLTDEPAD-HPSWSGDSSTLLYLS- 606

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                G++L +I + G   T +  P     P 
Sbjct: 607 -----GARLRTIPVTGGAPTTVRVPLDLRPPT 633



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/313 (17%), Positives = 100/313 (31%), Gaps = 55/313 (17%)

Query: 175 SRILFVSESVVSGII-----KNSLCVMDRDGANIRYLTPSR--DQILFEPRFSPNQQKVA 227
           +RILFV    V+          ++  +   G        +   D  +  P  +P+ +++A
Sbjct: 209 TRILFVRGQGVTTATGPALDARTVAAVSATGTGAVTTVHTGTADGQIIAPALAPDGRRLA 268

Query: 228 YA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS------VQKDE 280
           Y  T        V ++D         +         PR+++ G+  L        ++ D 
Sbjct: 269 YLRTTPAPRAGCVLVLDGAPVPVTGDLAAVP-----PRWTARGELLLTVDGCFTLLRPDR 323

Query: 281 AMDIYSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFESDREGKE 326
                ++      T R                         + SPD  +I F +      
Sbjct: 324 PTAPRTLPFDGTLTARRPRYRVKEYDLGEARVQPVRGIHLPALSPDGGRIAFAA----LN 379

Query: 327 QLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            L++  +NG    R  +   A+ +   PVW P G  + +         I  +      E+
Sbjct: 380 SLWLAHTNGERPPRRLRTAPATRYLLGPVWDPAGRSLLYADDRDGLLGIRRLDLATGAEQ 439

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP---------- 434
            L        P  SP G  L        DT  +L   DL    E ++ TP          
Sbjct: 440 TLAAGGRA-FPALSPDGTRLACL-----DTTGRLLVRDLVTGAERVLATPLSGGGLPGRP 493

Query: 435 AYASDPQWVGFMD 447
           +++ D +W+   D
Sbjct: 494 SWSPDGRWIALCD 506


>gi|294817520|ref|ZP_06776162.1| Amidohydrolase [Streptomyces clavuligerus ATCC 27064]
 gi|326446154|ref|ZP_08220888.1| hypothetical protein SclaA2_34047 [Streptomyces clavuligerus ATCC
           27064]
 gi|294322335|gb|EFG04470.1| Amidohydrolase [Streptomyces clavuligerus ATCC 27064]
          Length = 1087

 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 76/210 (36%), Gaps = 31/210 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G+    S  +D    +++V        R T   + +   ++SPD ++I F S+R
Sbjct: 116 PTHSPDGELVAFSAYRDGNHHLWTVRPDGTGLRRRTEGPWDDRGPAWSPDGTRIAFASER 175

Query: 323 EGKE------QLYVMQSNGSDQKRIS---------QDKEASYFDPVWSPQGDLIAFTKFS 367
            G        +++V+     +  R++         QD     +DP WSP G  I F +  
Sbjct: 176 GGDPATGAPYRIHVLDLRTGNLTRLTGLSGQQGPLQDGPWEDYDPTWSPDGTRILFVRGQ 235

Query: 368 G---------EKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           G         +   +  +   G+           D  + AP  +P GR L + R      
Sbjct: 236 GVTTATGPALDARTVAAVSATGTGAVTTVHTGTADGQIIAPALAPDGRRLAYLRTTPAPR 295

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              +    L+G    +    A    P+W  
Sbjct: 296 AGCVLV--LDGAPVPVTGDLAAVP-PRWTA 322



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 74/221 (33%), Gaps = 39/221 (17%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             A   +  G   +  VQ      ++S+         LT         ++SPD   + F 
Sbjct: 73  NGAASLAPGGGGLIAEVQ----STLWSLPADGGRATPLTPADLEPARPTHSPDGELVAFS 128

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------FAI 373
           + R+G   L+ ++ +G+  +R + +       P WSP G  IAF    G        + I
Sbjct: 129 AYRDGNHHLWTVRPDGTGLRRRT-EGPWDDRGPAWSPDGTRIAFASERGGDPATGAPYRI 187

Query: 374 GVMKKDGSQERLLV-----------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK----- 417
            V+         L                   PTWSP G  ++F R +   T +      
Sbjct: 188 HVLDLRTGNLTRLTGLSGQQGPLQDGPWEDYDPTWSPDGTRILFVRGQGVTTATGPALDA 247

Query: 418 --LYSIDLNGRNET----------LINTPAYASDPQWVGFM 446
             + ++   G               I  PA A D + + ++
Sbjct: 248 RTVAAVSATGTGAVTTVHTGTADGQIIAPALAPDGRRLAYL 288



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 92/244 (37%), Gaps = 33/244 (13%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +++L  +  DG     LTP  D     P  SP+ + VA++ Y D +    +L   R D  
Sbjct: 90  QSTLWSLPADGGRATPLTP-ADLEPARPTHSPDGELVAFSAYRDGN---HHLWTVRPDGT 145

Query: 250 P-KRIGNFRSMILAPRFSSNGKRALISVQKDEAM------DIYSVDLQSNATERLT---- 298
             +R          P +S +G R   + ++           I+ +DL++    RLT    
Sbjct: 146 GLRRRTEGPWDDRGPAWSPDGTRIAFASERGGDPATGAPYRIHVLDLRTGNLTRLTGLSG 205

Query: 299 ------NTLFINISASYSPDSSQIVFESDRE---------GKEQLYVMQSNGSDQKRI-- 341
                 +  + +   ++SPD ++I+F   +              +  + + G+       
Sbjct: 206 QQGPLQDGPWEDYDPTWSPDGTRILFVRGQGVTTATGPALDARTVAAVSATGTGAVTTVH 265

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           +   +     P  +P G  +A+ + +    A  V+  DG+   +   D     P W+  G
Sbjct: 266 TGTADGQIIAPALAPDGRRLAYLRTTPAPRAGCVLVLDGAPVPV-TGDLAAVPPRWTARG 324

Query: 402 RSLI 405
             L+
Sbjct: 325 ELLL 328



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 98/279 (35%), Gaps = 41/279 (14%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +    V + D    R         +  P  SP+  ++A+A  +      ++L  T  +
Sbjct: 356 ARRPRYRVKEYDLGEARVQPVRG---IHLPALSPDGGRIAFAALN-----SLWLAHTNGE 407

Query: 248 RAPKRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           R P+R+    +   +L P +   G+  L +  +D  + I  +DL + A +  T       
Sbjct: 408 RPPRRLRTAPATRYLLGPVWDPAGRSLLYADDRDGLLGIRRLDLATGAEQ--TLAAGGRA 465

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLIAF 363
             + SPD +++    D  G  +L V       ++ ++           P WSP G  IA 
Sbjct: 466 FPALSPDGTRLA-CLDTTG--RLLVRDLVTGAERVLATPLSGGGLPGRPSWSPDGRWIAL 522

Query: 364 T-------KFSGEKFAIGVMKKDGSQERLLV-------EDSNLQAPTWSPSGRSLIFSRK 409
                   +F      + ++      +RL          D +   P WSP G  L     
Sbjct: 523 CDRNRISLRFREGYNLLRIVDAGTGADRLHTVAPHTSISDRHASGPVWSPDGAWLAVVV- 581

Query: 410 KDGDTGSKLYSIDLNGRN----ETLINTPAYASDPQWVG 444
              ++   L  +  +G        L + PA    P W G
Sbjct: 582 ---ESALCLLPVAPDGTPTGPLRPLTDEPAD--HPSWSG 615



 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 57/272 (20%), Positives = 94/272 (34%), Gaps = 38/272 (13%)

Query: 191 NSLCVMDRDGANI--RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           NSL +   +G     R  T    + L  P + P  + + YA  D + +L +  +D     
Sbjct: 397 NSLWLAHTNGERPPRRLRTAPATRYLLGPVWDPAGRSLLYAD-DRDGLLGIRRLDLATGA 455

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINI 305
                   R+    P  S +G R       D    +   DL + A   L        +  
Sbjct: 456 EQTLAAGGRAF---PALSPDGTRLAC---LDTTGRLLVRDLVTGAERVLATPLSGGGLPG 509

Query: 306 SASYSPDSSQIVFE-------SDREGKEQLYVMQSNGSDQKRI------SQDKEASYFDP 352
             S+SPD   I            REG   L ++ + G+   R+      +   +     P
Sbjct: 510 RPSWSPDGRWIALCDRNRISLRFREGYNLLRIVDA-GTGADRLHTVAPHTSISDRHASGP 568

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           VWSP G  +A          +  +  DG      R L ++     P+WS    +L++   
Sbjct: 569 VWSPDGAWLAVV--VESALCLLPVAPDGTPTGPLRPLTDEPAD-HPSWSGDSSTLLYLS- 624

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                G++L +I + G   T +  P     P 
Sbjct: 625 -----GARLRTIPVTGGAPTTVRVPLDLRPPT 651



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/313 (17%), Positives = 100/313 (31%), Gaps = 55/313 (17%)

Query: 175 SRILFVSESVVSGII-----KNSLCVMDRDGANIRYLTPSR--DQILFEPRFSPNQQKVA 227
           +RILFV    V+          ++  +   G        +   D  +  P  +P+ +++A
Sbjct: 227 TRILFVRGQGVTTATGPALDARTVAAVSATGTGAVTTVHTGTADGQIIAPALAPDGRRLA 286

Query: 228 YA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS------VQKDE 280
           Y  T        V ++D         +         PR+++ G+  L        ++ D 
Sbjct: 287 YLRTTPAPRAGCVLVLDGAPVPVTGDLAAVP-----PRWTARGELLLTVDGCFTLLRPDR 341

Query: 281 AMDIYSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFESDREGKE 326
                ++      T R                         + SPD  +I F +      
Sbjct: 342 PTAPRTLPFDGTLTARRPRYRVKEYDLGEARVQPVRGIHLPALSPDGGRIAFAA----LN 397

Query: 327 QLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            L++  +NG    R  +   A+ +   PVW P G  + +         I  +      E+
Sbjct: 398 SLWLAHTNGERPPRRLRTAPATRYLLGPVWDPAGRSLLYADDRDGLLGIRRLDLATGAEQ 457

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP---------- 434
            L        P  SP G  L        DT  +L   DL    E ++ TP          
Sbjct: 458 TLAAGGRA-FPALSPDGTRLACL-----DTTGRLLVRDLVTGAERVLATPLSGGGLPGRP 511

Query: 435 AYASDPQWVGFMD 447
           +++ D +W+   D
Sbjct: 512 SWSPDGRWIALCD 524


>gi|296282776|ref|ZP_06860774.1| peptidase S9, prolyl oligopeptidase active site region
           [Citromicrobium bathyomarinum JL354]
          Length = 710

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 90/285 (31%), Gaps = 59/285 (20%)

Query: 214 LFEPRFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             +P+ SP+  ++AY         D     ++L+D R     K +        +PR+S +
Sbjct: 65  ASDPQISPDGSQIAYVRQSNDVMSDSTRSAIWLVDARTGEE-KPVAGQDGNAFSPRWSPS 123

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--------- 319
           G R         +  ++   +      RLT       S ++SPD   I +          
Sbjct: 124 GDRLAFVSTNGGSAQLWVRWMDGGEAVRLTGLPTSPSSMAWSPDGRSIAYTMLVKDDAPK 183

Query: 320 --------------------------------SDREGKEQLYVMQSNGSDQKRISQDKEA 347
                                             + G E+++V+ ++G   ++++     
Sbjct: 184 LGAAPENKPEGAEWAEPLQIYDLLTYRADGAGYLKPGFEKIFVIPADGGAPRQLTFGPSH 243

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKF-------AIGVMKKDGSQERLLVE-DSNLQAPTWSP 399
                 WS  G  I F       +        I  +         L + D    +P  SP
Sbjct: 244 DGGPLSWSRDGSTIYFGANRKADWQSDPVESEIYAVDLASGGISQLTDRDGPDHSPRVSP 303

Query: 400 SGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDPQ 441
            G  + +    D     +   LY +D +G N  ++ T ++   P 
Sbjct: 304 DGSRIAYLGYDDALRAYENDDLYVMDTDGSNRRIL-TESWDFSPT 347



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 66/384 (17%), Positives = 125/384 (32%), Gaps = 69/384 (17%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQV--LV 112
           F+    +    + +V+   Q +      +Q    Q  +   ++    D    GA +  L 
Sbjct: 7   FIGASAVALAPATLVA---QNTPPPEPAAQAEAPQSASAEGTVTPGPDRRFTGADLFDLA 63

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP--ASWRKIAHT-ISDDIYQSITGE 169
           T    +   D  ++ +    V+    ++     S+      R      ++     + +  
Sbjct: 64  TASDPQISPDGSQIAY----VRQSNDVMSDSTRSAIWLVDARTGEEKPVAGQDGNAFSPR 119

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
                 R+ FVS +  S      L V   DG     LT           +SP+ + +AY 
Sbjct: 120 WSPSGDRLAFVSTNGGSA----QLWVRWMDGGEAVRLTGLPTSPSSM-AWSPDGRSIAYT 174

Query: 230 TYDDED-------------------ILRVYLMDT--------------------RIDRAP 250
               +D                    L++Y + T                        AP
Sbjct: 175 MLVKDDAPKLGAAPENKPEGAEWAEPLQIYDLLTYRADGAGYLKPGFEKIFVIPADGGAP 234

Query: 251 KRIGNFRSMILAP-RFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLF 302
           +++    S    P  +S +G        +            IY+VDL S    +LT+   
Sbjct: 235 RQLTFGPSHDGGPLSWSRDGSTIYFGANRKADWQSDPVESEIYAVDLASGGISQLTDRDG 294

Query: 303 INISASYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + S   SPD S+I +    +       + LYVM ++GS+++ +++  + S     W   
Sbjct: 295 PDHSPRVSPDGSRIAYLGYDDALRAYENDDLYVMDTDGSNRRILTESWDFSPTGIEWDAD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGS 381
           G  I        +  +  +  DGS
Sbjct: 355 GRAIYAQYDVSGETRVARIGLDGS 378



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 42/105 (40%), Gaps = 8/105 (7%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
           A+  DP  SP G  IA+ + S +        AI ++     +E+ +  +D N  +P WSP
Sbjct: 63  ATASDPQISPDGSQIAYVRQSNDVMSDSTRSAIWLVDARTGEEKPVAGQDGNAFSPRWSP 122

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           SG  L F     G     +  +D  G    L   P   S   W  
Sbjct: 123 SGDRLAFVSTNGGSAQLWVRWMDG-GEAVRLTGLPTSPSSMAWSP 166



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 5/64 (7%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDL-NGRNETLINTPAYASDP 440
           L + +    P  SP G  + + R+ +      T S ++ +D   G  + +      A  P
Sbjct: 59  LFDLATASDPQISPDGSQIAYVRQSNDVMSDSTRSAIWLVDARTGEEKPVAGQDGNAFSP 118

Query: 441 QWVG 444
           +W  
Sbjct: 119 RWSP 122


>gi|83816740|ref|YP_444453.1| hypothetical protein SRU_0307 [Salinibacter ruber DSM 13855]
 gi|83758134|gb|ABC46247.1| hypothetical protein SRU_0307 [Salinibacter ruber DSM 13855]
          Length = 995

 Score =  127 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 53/299 (17%), Positives = 108/299 (36%), Gaps = 32/299 (10%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  Y  + G   D  +     +       +       D  G  +     +  +I   P  
Sbjct: 179 DSAYVELFGVSADSLTNEWAEATRDAYEPLMKGRTPPDSAGQTVLAPETNGGRINIAPSL 238

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS---------MILAPRFSSNGK 270
           SP+ + VA+ +  +     +Y+ D         +    +         +  +  +S +G+
Sbjct: 239 SPDGRYVAFISERELFSFNLYVADAETGEVIAELDRAGTTGHFNALRFISSSGTWSPDGR 298

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----SASYSPDSSQIVFESDREGK 325
           R      +D    I   ++     ER   +  ++      + ++SPD +++ F     G 
Sbjct: 299 RLAFVSSEDGDNQITVWNVVDEEIER---SFSVDGVTSMKNPAWSPDGTRLAFAGTDGGI 355

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----------KFAIGV 375
             LYV+       ++++ D+ A    P W+P G+ IAF     E             +G+
Sbjct: 356 SDLYVLNLETESVRQLTNDRYADL-QPTWAPDGETIAFATDRAETNLETLSPSSNMDLGL 414

Query: 376 MKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +     +   R    D+    P ++P G+SL F   +DG     +Y +DL+  +   + 
Sbjct: 415 VDVSSGEVTVRAPFGDALHHNPQFAPDGQSLYFISDQDG--FKDVYRMDLSSGDRFRVT 471



 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 29/222 (13%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNAT-----ERLTNT-----LF 302
            N   + +AP  S +G+      +++  + ++Y  D ++           T        F
Sbjct: 227 TNGGRINIAPSLSPDGRYVAFISERELFSFNLYVADAETGEVIAELDRAGTTGHFNALRF 286

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLI 361
           I+ S ++SPD  ++ F S  +G  Q+ V      + +R  S D   S  +P WSP G  +
Sbjct: 287 ISSSGTWSPDGRRLAFVSSEDGDNQITVWNVVDEEIERSFSVDGVTSMKNPAWSPDGTRL 346

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKK--------DG 412
           AF    G    + V+  +    R L  D      PTW+P G ++ F+  +          
Sbjct: 347 AFAGTDGGISDLYVLNLETESVRQLTNDRYADLQPTWAPDGETIAFATDRAETNLETLSP 406

Query: 413 DTGSKLYSIDLNGRNETLI--------NTPAYASDPQWVGFM 446
            +   L  +D++    T+         + P +A D Q + F+
Sbjct: 407 SSNMDLGLVDVSSGEVTVRAPFGDALHHNPQFAPDGQSLYFI 448



 Score = 93.5 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 25/209 (11%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANI------------RYLTPSRDQILFEPR 218
           G FN+     S    S   +    V   DG N             R  +      +  P 
Sbjct: 279 GHFNALRFISSSGTWSPDGRRLAFVSSEDGDNQITVWNVVDEEIERSFSVDGVTSMKNPA 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---- 274
           +SP+  ++A+A  D   I  +Y+++   +   +++ N R   L P ++ +G+        
Sbjct: 339 WSPDGTRLAFAGTD-GGISDLYVLNLETES-VRQLTNDRYADLQPTWAPDGETIAFATDR 396

Query: 275 ------SVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                 ++     MD+  VD+ S     R      ++ +  ++PD   + F SD++G + 
Sbjct: 397 AETNLETLSPSSNMDLGLVDVSSGEVTVRAPFGDALHHNPQFAPDGQSLYFISDQDGFKD 456

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +Y M  +  D+ R+++ K         SP
Sbjct: 457 VYRMDLSSGDRFRVTRLKTGVSGITALSP 485


>gi|268315847|ref|YP_003289566.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Rhodothermus marinus DSM 4252]
 gi|262333381|gb|ACY47178.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Rhodothermus marinus DSM 4252]
          Length = 686

 Score =  126 bits (317), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 53/326 (16%), Positives = 113/326 (34%), Gaps = 79/326 (24%)

Query: 176 RILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           RI+F            +++L +M+ DG+  R+L   R      PR+SP+  ++A+   D 
Sbjct: 47  RIVFTRRWVDQQKDRWQSALWIMNADGSQQRFLVEGRS-----PRWSPDGTRIAFIANDA 101

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
           E   ++++    +   P ++ +      +  +S +G+    ++                 
Sbjct: 102 EGRPQIFVKWVDLPEPPTQLTHLTEAPGSITWSPDGRMIAFTMNVPVEVRWNVDLPKPPE 161

Query: 278 ------------------------KDEAMDIYSVDLQSNATERLTNTLFINISA------ 307
                                   ++    ++ +  +     +LT     ++        
Sbjct: 162 GATWTKPPRLVRRLHYRADRRGFMEEAYTHLFVIPAEGGTPRQLTEGT-WHVGPRFDGLP 220

Query: 308 -----SYSPDSSQIVF--------ESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPV 353
                S++PD   IVF          DR  +   LY +       ++++++    +  P 
Sbjct: 221 AGATLSWTPDGRTIVFDGFKASADSVDRNYRNAHLYAVDVATRQLRQLTRE-PGRWTQPA 279

Query: 354 WSPQGDLIAF-----TKFSGEKFAIGVMKKDGS-QERLLVE--DSNLQAPTWSPSGRSLI 405
            SP G  +AF     T+ +     + +M  DGS   R L    D ++    W+P G  + 
Sbjct: 280 VSPDGRWVAFTGYAETRQTYHAADLWLMPLDGSAAPRNLTRALDRDVSNLHWAPDGSGVY 339

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLI 431
           F+    G     +Y   + G    + 
Sbjct: 340 FTIDDRGTR--NVYFASVRGEVRQVT 363



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 55/306 (17%), Positives = 97/306 (31%), Gaps = 75/306 (24%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           + +P+ SP+ +++ +     +     +     I  A      F     +PR+S +G R  
Sbjct: 36  VNDPQISPDGRRIVFTRRWVDQQKDRWQSALWIMNADGSQQRFLVEGRSPRWSPDGTRIA 95

Query: 274 ISVQ-KDEAMDIYS--VDLQSNATERLTNTLFINISASYSPDSSQIVFE----------- 319
                 +    I+   VDL      +LT+      S ++SPD   I F            
Sbjct: 96  FIANDAEGRPQIFVKWVDLPE-PPTQLTHLTEAPGSITWSPDGRMIAFTMNVPVEVRWNV 154

Query: 320 ------------------------SDREG-----KEQLYVMQSNGSDQKRIS-------- 342
                                   +DR G        L+V+ + G   ++++        
Sbjct: 155 DLPKPPEGATWTKPPRLVRRLHYRADRRGFMEEAYTHLFVIPAEGGTPRQLTEGTWHVGP 214

Query: 343 -QDKEASYFDPVWSPQGDLIAF---------TKFSGEKFAIGVMKKDGSQERLLV-EDSN 391
             D   +     W+P G  I F            +     +  +     Q R L  E   
Sbjct: 215 RFDGLPAGATLSWTPDGRTIVFDGFKASADSVDRNYRNAHLYAVDVATRQLRQLTREPGR 274

Query: 392 LQAPTWSPSGRSLIFSRK---KDGDTGSKLYSIDLNG----RNETL-----INTPAYASD 439
              P  SP GR + F+     +     + L+ + L+G    RN T      ++   +A D
Sbjct: 275 WTQPAVSPDGRWVAFTGYAETRQTYHAADLWLMPLDGSAAPRNLTRALDRDVSNLHWAPD 334

Query: 440 PQWVGF 445
              V F
Sbjct: 335 GSGVYF 340



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/327 (12%), Positives = 96/327 (29%), Gaps = 68/327 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           +RI F++        +  + V   D            +      +SP+ + +A+      
Sbjct: 92  TRIAFIAN---DAEGRPQIFVKWVDLPEPPTQLTHLTEAPGSITWSPDGRMIAFTMNVPV 148

Query: 232 -----------------------------------DDEDILRVYLMDTRIDRAPKRIGNF 256
                                                E+      +       P+++   
Sbjct: 149 EVRWNVDLPKPPEGATWTKPPRLVRRLHYRADRRGFMEEAYTHLFVIPAEGGTPRQLTEG 208

Query: 257 RSMILAPR-----------FSSNGKRALI--------SVQKD-EAMDIYSVDLQSNATER 296
              +  PR           ++ +G+  +         SV ++     +Y+VD+ +    +
Sbjct: 209 TWHV-GPRFDGLPAGATLSWTPDGRTIVFDGFKASADSVDRNYRNAHLYAVDVATRQLRQ 267

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQSNGSDQKR-ISQDKEASYF 350
           LT         + SPD   + F    E ++      L++M  +GS   R +++  +    
Sbjct: 268 LTREPGRWTQPAVSPDGRWVAFTGYAETRQTYHAADLWLMPLDGSAAPRNLTRALDRDVS 327

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           +  W+P G  + FT        +      G   ++      L   + S +G ++      
Sbjct: 328 NLHWAPDGSGVYFTIDDRGTRNVYFASVRGEVRQVTRGVHMLTLSSISRNGVAVGVRTSY 387

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYA 437
                   ++++   + E L       
Sbjct: 388 HEPDDVVRFALNRPDQIERLTAVNDDV 414



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 15/126 (11%)

Query: 330 VMQSNGSDQKRISQDKEASY---FDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDG 380
           +  ++ +   R++ ++   +    DP  SP G  I FT+          + A+ +M  DG
Sbjct: 14  IAPASHAQSDRLTLERYLEWEDVNDPQISPDGRRIVFTRRWVDQQKDRWQSALWIMNADG 73

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS--IDLNGRNETLINTPAYAS 438
           SQ+R LVE     +P WSP G  + F    D +   +++   +DL      L +      
Sbjct: 74  SQQRFLVEGR---SPRWSPDGTRIAFIAN-DAEGRPQIFVKWVDLPEPPTQLTHLTEAPG 129

Query: 439 DPQWVG 444
              W  
Sbjct: 130 SITWSP 135


>gi|295702778|ref|YP_003595853.1| putative peptidase [Bacillus megaterium DSM 319]
 gi|294800437|gb|ADF37503.1| putative peptidase [Bacillus megaterium DSM 319]
          Length = 659

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 90/255 (35%), Gaps = 48/255 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNG 269
           ++ P+ SP+ + V Y   + + I   Y     +     +  KR+  ++    +P +S +G
Sbjct: 20  VYNPQISPDGKSVVYTVRETKKIENAYETQLFMLDIETKETKRLTYYKGNNHSPAWSPDG 79

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---------- 319
           K       + +A+ +Y + +     E LT+      +  +SP S +I+F           
Sbjct: 80  KWIAFLSDRSQAVQLYLLAVAGGEAEALTDLEKGVSNPVWSPYSDEIMFSTKVGEKAVRV 139

Query: 320 ------------------SDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                             SD  G       Q+ V++    +   ++ D    +    WSP
Sbjct: 140 EQNHEYPQPYEVERLLYKSDASGYLKGEYAQVAVVKLKNKEVTFLT-DGPYHHSVGCWSP 198

Query: 357 QGDLIAFTKFSGEK------FAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFS-- 407
             + I F    GE         + ++ +D  +   +  E       +WSP G  + +   
Sbjct: 199 DTNSIVFCSSRGENPDLSLTMDVFILHRDTKKVTSITGETGYFHQVSWSPDGSYIAYIGN 258

Query: 408 -RKKDGDTGSKLYSI 421
            R     + + +Y  
Sbjct: 259 ERTYGSASMNDIYIY 273



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 10/108 (9%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLV-EDSNLQAPTWSPS 400
           S ++P  SP G  + +T    +K        + ++  +  + + L     N  +P WSP 
Sbjct: 19  SVYNPQISPDGKSVVYTVRETKKIENAYETQLFMLDIETKETKRLTYYKGNNHSPAWSPD 78

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVGFMD 447
           G+ + F   +      +LY + + G   E L +     S+P W  + D
Sbjct: 79  GKWIAFLSDRS--QAVQLYLLAVAGGEAEALTDLEKGVSNPVWSPYSD 124



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 37/72 (51%), Gaps = 11/72 (15%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLIN-------TP 434
           L E  ++  P  SP G+S++++ ++    +    ++L+ +D+  +    +        +P
Sbjct: 14  LYELKSVYNPQISPDGKSVVYTVRETKKIENAYETQLFMLDIETKETKRLTYYKGNNHSP 73

Query: 435 AYASDPQWVGFM 446
           A++ D +W+ F+
Sbjct: 74  AWSPDGKWIAFL 85


>gi|284046037|ref|YP_003396377.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Conexibacter woesei DSM 14684]
 gi|283950258|gb|ADB53002.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Conexibacter woesei DSM 14684]
          Length = 305

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 25/221 (11%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALIS 275
           P +SP+  ++A+      D      +         R+   R +    P FS +G +    
Sbjct: 90  PAWSPDGTRIAF------DAGTRIGLLDGDGGGTVRLLPARGLNSGRPVFSPSGTQLAFD 143

Query: 276 VQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                    ++  DL      RLT       S ++S   + I FE D     QLY ++ +
Sbjct: 144 AGPSAGGQQLWISDLFGGGARRLTGRGG--RSPAWSTRGT-IAFERD----GQLYAIRPD 196

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           GS  +R++         P WSP G  +AF +   +   + VM  DGS  R +     +++
Sbjct: 197 GSGLRRLTGRGGR---APAWSPHGTKLAFVRRRADL--LYVMNADGSGLRQVRGPRGVES 251

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
             WSP GR L++     G     + +I  +GR E  +   A
Sbjct: 252 VRWSPDGRRLVYEAFDAG-----VLTIGTDGRGERQLVQDA 287



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/185 (25%), Positives = 75/185 (40%), Gaps = 19/185 (10%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFES 320
            P +S +G R       D    I  +D     T RL     +N     +SP  +Q+ F++
Sbjct: 89  TPAWSPDGTRIAF----DAGTRIGLLDGDGGGTVRLLPARGLNSGRPVFSPSGTQLAFDA 144

Query: 321 DRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               G +QL++    G   +R++     S   P WS +G  IAF +       +  ++ D
Sbjct: 145 GPSAGGQQLWISDLFGGGARRLTGRGGRS---PAWSTRGT-IAFERDG----QLYAIRPD 196

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           GS  R L      +AP WSP G  L F R++       LY ++ +G     +  P     
Sbjct: 197 GSGLRRLTGRGG-RAPAWSPHGTKLAFVRRR----ADLLYVMNADGSGLRQVRGPRGVES 251

Query: 440 PQWVG 444
            +W  
Sbjct: 252 VRWSP 256



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 93/222 (41%), Gaps = 17/222 (7%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E   F++       + ++      + ++D DG     L P+R      P FSP+  ++A+
Sbjct: 83  EAPQFDTPAWSPDGTRIAFDAGTRIGLLDGDGGGTVRLLPARGLNSGRPVFSPSGTQLAF 142

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                    ++++ D     A +  G       +P +S+ G    I+ ++D    +Y++ 
Sbjct: 143 DAGPSAGGQQLWISDLFGGGARRLTGRGG---RSPAWSTRGT---IAFERDG--QLYAIR 194

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
              +   RLT       + ++SP  +++ F   R   + LYVM ++GS  +++       
Sbjct: 195 PDGSGLRRLTGRGG--RAPAWSPHGTKLAFVRRRA--DLLYVMNADGSGLRQV--RGPRG 248

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                WSP G  + +  F      IG    DG  ER LV+D+
Sbjct: 249 VESVRWSPDGRRLVYEAFDAGVLTIGT---DGRGERQLVQDA 287


>gi|148907920|gb|ABR17080.1| unknown [Picea sitchensis]
          Length = 714

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 80/398 (20%), Positives = 139/398 (34%), Gaps = 68/398 (17%)

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
           S  +  ++IT P         +  G  + V     + G D   +E  ++D+  +K I   
Sbjct: 309 SSSALVERITPPGIDAFTPAASRTGPWIAV--ATRRPGHDYRHIE--IFDLLKKKFIQVT 364

Query: 143 KFFSSPASWRKIAHTISDDI-YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
           +   SP S        SD I Y      +G      + V E + S +   SL  +  DG+
Sbjct: 365 RL-VSPNSHHYNPFVSSDRIGYHRC---RGGHVGNRVPVLEQIRSPLPSLSLFRI--DGS 418

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
                          P FSP+   +AY    +   + V  +D    R       F     
Sbjct: 419 --------------FPSFSPDGSLIAYIPNIEYSGVYVMRLDGSGRRKI-----FSGAAF 459

Query: 262 APRFSSNGKRALISVQKDEAMD----------IYSVDLQSNATERLT----NTLFINISA 307
              +  + KR ++        +          IY+ D +  +   ++         N   
Sbjct: 460 GTAW--DWKRGVVYTSAGPGFETETTTVDIVAIYNADREGTSESEISYKTLTKEGNNAFP 517

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTK 365
           S SPD   +VF S R G + LY+M +   ++  + Q  E  + D    WSP G+ IAF  
Sbjct: 518 SPSPDGKFVVFRSGRTGHKNLYIMDAEEGEEGGLWQLTEGPWTDTMCNWSPDGEWIAFAS 577

Query: 366 FSG----EKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDG------ 412
                    FA+  +  +G+    ++       +  P +SP  +SL+F+    G      
Sbjct: 578 DRDSPGSGGFAMYFIHPNGTGLHRVLNSSTAGRVNHPWFSPDSKSLVFTSDYAGVSAEPI 637

Query: 413 ------DTGSKLYSIDLNGRNETLINTPAY-ASDPQWV 443
                     +++   ++G     +   AY    P W 
Sbjct: 638 SVPHQFQPYGEIFMARVDGSELQRLTHNAYEDGTPSWG 675



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 62/174 (35%), Gaps = 22/174 (12%)

Query: 269 GKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES- 320
           G   +    + +          +YS  +++  T RLT     ++S + SP    ++  S 
Sbjct: 185 GNSMVYVSTRGQTKASRKSWAAVYSTSIKTGRTRRLTPDGIADLSPAVSPSGEWVMAASA 244

Query: 321 -DREGKEQL-------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +R  + ++       YV +++    +R+          P W+    +    +     ++
Sbjct: 245 GERGWQGEIRDLETDLYVFRASDGSGRRLVVKHGG---WPSWADDNTVFFHRQAEDGWWS 301

Query: 373 IGVMKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +     + S    ER+     +   P  S +G  +  + ++ G     +   DL
Sbjct: 302 VYRASVNSSSALVERITPPGIDAFTPAASRTGPWIAVATRRPGHDYRHIEIFDL 355



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 71/223 (31%), Gaps = 31/223 (13%)

Query: 220 SPNQQKVAYATYD------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           S     + Y +         +    VY    +  R  +R+       L+P  S +G+  +
Sbjct: 182 SMAGNSMVYVSTRGQTKASRKSWAAVYSTSIKTGR-TRRLTPDGIADLSPAVSPSGEWVM 240

Query: 274 ISVQ---------KDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDRE 323
            +           +D   D+Y       +  RL           S++ D++        +
Sbjct: 241 AASAGERGWQGEIRDLETDLYVFRASDGSGRRLVVKHGGW---PSWADDNTVFFHRQAED 297

Query: 324 GKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKD 379
           G   +Y    N S    +RI+       F P  S  G  IA            I +    
Sbjct: 298 GWWSVYRASVNSSSALVERITPPG-IDAFTPAASRTGPWIAVATRRPGHDYRHIEIFDLL 356

Query: 380 GSQ----ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +     RL+  +S+   P  S     + + R + G  G+++
Sbjct: 357 KKKFIQVTRLVSPNSHHYNPFVSSD--RIGYHRCRGGHVGNRV 397


>gi|326798425|ref|YP_004316244.1| peptidase S41 [Sphingobacterium sp. 21]
 gi|326549189|gb|ADZ77574.1| peptidase S41 [Sphingobacterium sp. 21]
          Length = 1074

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 91/252 (36%), Gaps = 31/252 (12%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           ++ EP  SP+ Q++A+ +    DI  V    +      + +    +    P +S +G + 
Sbjct: 48  LISEPGISPDGQEIAFVS--GGDIWTV----SASGGEARLLIAHPAQDSRPLYSPDGSQL 101

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGKEQLY 329
                +    DIY + L      RLT        + +S D   ++F S   D      ++
Sbjct: 102 AFVSTRTGNGDIYVLSLSDGKLRRLTYDEGPEELSGWSADGKYLLFHSNTGDIASMYDIW 161

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKF-----------AIGVM 376
            +  +G     +S D+ A+ +  V SP    IAF     +G ++            I + 
Sbjct: 162 KIPIDGGTPMPVSADRYATEYYGVTSPNNQHIAFAARGMAGAQWWRRGSSHLDQSEIWIR 221

Query: 377 KKDG-----SQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                    +  + + E       P W   G+SL F   + G     L+  DL G+   L
Sbjct: 222 PFSTAALSDTDYQQITETGARSVWPMWDADGKSLFFVSDRSG--NQNLWKTDLQGKATML 279

Query: 431 IN-TPAYASDPQ 441
              T +    P 
Sbjct: 280 TQFTDSRVLWPS 291



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 74/208 (35%), Gaps = 31/208 (14%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +I  P  S +G+            DI++V         L      +    YSPD SQ+ F
Sbjct: 48  LISEPGISPDGQEIAFVS----GGDIWTVSASGGEARLLIAHPAQDSRPLYSPDGSQLAF 103

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAIGV 375
            S R G   +YV+  +    +R++ D E       WS  G  + F   +G+    + I  
Sbjct: 104 VSTRTGNGDIYVLSLSDGKLRRLTYD-EGPEELSGWSADGKYLLFHSNTGDIASMYDIWK 162

Query: 376 MKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYS-----ID------ 422
           +  DG     +  D          SP+ + + F+ +  G  G++ +      +D      
Sbjct: 163 IPIDGGTPMPVSADRYATEYYGVTSPNNQHIAFAAR--GMAGAQWWRRGSSHLDQSEIWI 220

Query: 423 --------LNGRNETLINTPAYASDPQW 442
                    +   + +  T A +  P W
Sbjct: 221 RPFSTAALSDTDYQQITETGARSVWPMW 248



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 94/278 (33%), Gaps = 37/278 (13%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  +   G   R L     Q    P +SP+  ++A+ +    +   +Y++    D   +
Sbjct: 68  DIWTVSASGGEARLLIAHPAQ-DSRPLYSPDGSQLAFVSTRTGNG-DIYVLSL-SDGKLR 124

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNTL-FINISA 307
           R+           +S++GK  L      +     DI+ + +       ++          
Sbjct: 125 RLTYDEGPEELSGWSADGKYLLFHSNTGDIASMYDIWKIPIDGGTPMPVSADRYATEYYG 184

Query: 308 SYSPDSSQIVFESD--------REGKEQ-----LYVMQ-----SNGSDQKRISQDKEASY 349
             SP++  I F +         R G        +++        + +D ++I++   A  
Sbjct: 185 VTSPNNQHIAFAARGMAGAQWWRRGSSHLDQSEIWIRPFSTAALSDTDYQQITETG-ARS 243

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSR 408
             P+W   G  + F         +      G    L    DS +  P+ +   R+++F R
Sbjct: 244 VWPMWDADGKSLFFVSDRSGNQNLWKTDLQGKATMLTQFTDSRVLWPSITKDARTIVFER 303

Query: 409 KKDGDTGSKLYSIDLN----GRNETLINTPAYASDPQW 442
                   K++  D+     G  E  +   A    PQ+
Sbjct: 304 D------WKIWKYDVASQKVGALEINLRGNANQQLPQY 335



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 72/199 (36%), Gaps = 16/199 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +K+ +  + D     ++   T       R+ N   +     ++S+ K    S    
Sbjct: 348 SPDGKKLVFLAHGD-----LFASSTTARGEAVRLTNTPEIEGNAIWASDSKSIFFSTHST 402

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           E   +Y  ++ +     L        S   SPD + + +  +    ++L V       ++
Sbjct: 403 EHPKLYRCEVPTQTITSLPLPEGDYNSLVLSPDGNLLAYIRN---TKELAVFDLETKKER 459

Query: 340 RISQD-----KEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQ 393
            + +        AS     WSP G  +AF  +       I +    G + + +   SN  
Sbjct: 460 ILYKGSLGRMSFASNISIAWSPDGQYVAFANYDSNAVRNIWLAPYKGGEAKPISFLSNTF 519

Query: 394 APT--WSPSGRSLIFSRKK 410
             +  WS  G+ + F+  +
Sbjct: 520 GSSVDWSADGKYIYFATSQ 538



 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 54/314 (17%), Positives = 109/314 (34%), Gaps = 43/314 (13%)

Query: 157 TISDDIYQSITGEKGD-------FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           ++SD   + +T ++G         + + L    +         +  +  DG     ++  
Sbjct: 117 SLSDGKLRRLTYDEGPEELSGWSADGKYLLFHSNTGDIASMYDIWKIPIDGGTPMPVSAD 176

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDI----------------LRVYLMDTRIDRAPKRI 253
           R    +    SPN Q +A+A                       +R +      D   ++I
Sbjct: 177 RYATEYYGVTSPNNQHIAFAARGMAGAQWWRRGSSHLDQSEIWIRPFSTAALSDTDYQQI 236

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSP 311
               +  + P + ++GK       +    +++  DLQ  A    + T++  +    S + 
Sbjct: 237 TETGARSVWPMWDADGKSLFFVSDRSGNQNLWKTDLQGKATMLTQFTDSRVL--WPSITK 294

Query: 312 DSSQIVFESDR--------EGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLI 361
           D+  IVFE D           K     +   G+  +++ Q K+ S  + + V SP G  +
Sbjct: 295 DARTIVFERDWKIWKYDVASQKVGALEINLRGNANQQLPQYKDVSDEFQELVVSPDGKKL 354

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYS 420
            F    G+ F          +   L     ++    W+   +S+ FS         KLY 
Sbjct: 355 VFLAH-GDLF--ASSTTARGEAVRLTNTPEIEGNAIWASDSKSIFFST--HSTEHPKLYR 409

Query: 421 IDLNGRNETLINTP 434
            ++  +  T +  P
Sbjct: 410 CEVPTQTITSLPLP 423



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 106/342 (30%), Gaps = 68/342 (19%)

Query: 131 WDVKDRKQ-IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           +DV  +K   +      +          +SD+  + +    G    +++F++        
Sbjct: 310 YDVASQKVGALEINLRGNANQQLPQYKDVSDEFQELVVSPDG---KKLVFLAH------- 359

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI--LRVYLMDTRID 247
              L               +  +I     ++ + + + ++T+  E     R  +    I 
Sbjct: 360 -GDLFASSTTARGEAVRLTNTPEIEGNAIWASDSKSIFFSTHSTEHPKLYRCEVPTQTIT 418

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------ 301
             P   G++ S++L    S +G             ++   DL++     L          
Sbjct: 419 SLPLPEGDYNSLVL----SPDGNLLAYIRN---TKELAVFDLETKKERILYKGSLGRMSF 471

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             NIS ++SPD   + F + D      +++    G + K IS           WS  G  
Sbjct: 472 ASNISIAWSPDGQYVAFANYDSNAVRNIWLAPYKGGEAKPISFLSNTFGSSVDWSADGKY 531

Query: 361 IAF-TKFSGEKFAIGVMKK-------------------------DGSQERL--------- 385
           I F T    E   I  ++                          D S             
Sbjct: 532 IYFATSQRTENVRIARVELFPHTKPFQEDNFYQLFKEKSPSAKKDSSITTKVDFKDIKSR 591

Query: 386 ---LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              L  D ++     S +G++L+F+    G     LYS  L+
Sbjct: 592 LSFLPFDESVNNYVISHNGKTLLFAITNLGQQ--NLYSYSLD 631



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 93/254 (36%), Gaps = 29/254 (11%)

Query: 169 EKGDFNSRILFVSESVVSGIIK-NSLCVMDRDGANIRYLTPSRDQILFEP-----RFSPN 222
            +GD+NS +L    ++++ I     L V D +    R L       +         +SP+
Sbjct: 423 PEGDYNSLVLSPDGNLLAYIRNTKELAVFDLETKKERILYKGSLGRMSFASNISIAWSPD 482

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEA 281
            Q VA+A YD   +  ++L   +   A        +   +  +S++GK     + Q+ E 
Sbjct: 483 GQYVAFANYDSNAVRNIWLAPYKGGEAKPISFLSNTFGSSVDWSADGKYIYFATSQRTEN 542

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--ESDREGKEQLYVMQSNGSDQK 339
           + I  V+L            F +    +  D+   +F  +S    K+     + +  D K
Sbjct: 543 VRIARVEL------------FPHTKP-FQEDNFYQLFKEKSPSAKKDSSITTKVDFKDIK 589

Query: 340 -RISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-----LLVEDSNL 392
            R+S    + S  + V S  G  + F   +  +  +     D    +     +      L
Sbjct: 590 SRLSFLPFDESVNNYVISHNGKTLLFAITNLGQQNLYSYSLDELSTQPHPKLIFSSRGRL 649

Query: 393 QAPTWSPSGRSLIF 406
            +  +S   + + F
Sbjct: 650 GSIQFSKDDKQVYF 663



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 24/228 (10%), Positives = 71/228 (31%), Gaps = 19/228 (8%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           +     ++    +V+ +        ++ +    G   + ++   +       +S + + +
Sbjct: 473 SNISIAWSPDGQYVAFANYDSNAVRNIWLAPYKGGEAKPISFLSNTFGSSVDWSADGKYI 532

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +AT    + +R+  ++      P +  NF  +      S + K+              +
Sbjct: 533 YFATSQRTENVRIARVELFPHTKPFQEDNFYQLFKEK--SPSAKK----------DSSIT 580

Query: 287 VDLQSNATE-RLTNTLFINISASY--SPDSSQIVFESDREGKEQLYVMQSN---GSDQKR 340
             +     + RL+   F     +Y  S +   ++F     G++ LY    +        +
Sbjct: 581 TKVDFKDIKSRLSFLPFDESVNNYVISHNGKTLLFAITNLGQQNLYSYSLDELSTQPHPK 640

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +            +S     + F    G+ F++ +         +   
Sbjct: 641 LIFSSRGRLGSIQFSKDDKQVYFL-QGGKVFSLALASPTPKPLAITAH 687


>gi|168703674|ref|ZP_02735951.1| MdsD protein, putative [Gemmata obscuriglobus UQM 2246]
          Length = 1087

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 67/364 (18%), Positives = 124/364 (34%), Gaps = 78/364 (21%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           RK+    + + Y + TG    F             G   + + +   DG+N + +T   D
Sbjct: 150 RKLNLFEAKEAYFAPTGGAVAFVRGPGTWYRRGYRGSSNDDIWISGPDGSNPKRVTTF-D 208

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMD-------TRIDRAPKRIGNFRSMILAPR 264
                P F+P+ +++ Y T          ++        T    A +   +    +   R
Sbjct: 209 GQDSYPMFAPDARQLFYVTESQSKPGCANVVRQPLAPDFTPAGPAKRITAHDDDTVRRAR 268

Query: 265 FSSNGKRALISVQKDEAMDIYSVDL----------------------------------- 289
            S+NG   +  +  D  +     DL                                   
Sbjct: 269 LSANGDWIVYELGADLWVASARSDLPPRKLAIEVNADDKSNTERTHTYTRDATEYALAPD 328

Query: 290 ------------------QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                                   RLT   F + + ++SPD  +I+F SDR G   LY +
Sbjct: 329 EQHAVLVIHGQLFLTKVPGGGKATRLTEHEFADSNPAWSPDGKKILFASDRGGTTDLYAL 388

Query: 332 QSNGSDQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           +S+  +   +               +   +P +SP GD +AF +       + +M+ +GS
Sbjct: 389 ESDDPEHSELVKAHKFKTTKLTATTSEELNPTFSPAGDRVAFVREG----KLWLMRPNGS 444

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS--IDLNGRNETLINTPAYASD 439
           ++R+LV    +    W+P G+ + + R  DG   +++Y    D  G    +     + SD
Sbjct: 445 EQRVLVSAQKVLDYDWAPDGKHIAYCRM-DGSFAAEVYIQATDGTGTPVNVSRHATWNSD 503

Query: 440 PQWV 443
             W 
Sbjct: 504 VSWS 507



 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 83/220 (37%), Gaps = 26/220 (11%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +    P  SP+ + VA++   D            I    + +    +  + P FS +G+ 
Sbjct: 25  RFARTPDISPDGKTVAFSYLGD------IWTVEAIGGVARPVTMHEAHDVNPVFSPDGRL 78

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE----GKEQ 327
              S  +    D++ V        RLT     ++   ++PD   +VF S R        +
Sbjct: 79  IAFSSNRFGQYDVFVVSAAGGKPRRLTFDSAPDMVTGWTPDGKGVVFSSPRSVAYPINTE 138

Query: 328 LYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----------IGVM 376
            +V+ + G  ++++   + + +YF    +P G  +AF +  G  +           I + 
Sbjct: 139 CFVVPAEGGAERKLNLFEAKEAYF----APTGGAVAFVRGPGTWYRRGYRGSSNDDIWIS 194

Query: 377 KKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             DGS   R+   D     P ++P  R L +  +     G
Sbjct: 195 GPDGSNPKRVTTFDGQDSYPMFAPDARQLFYVTESQSKPG 234



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 90/288 (31%), Gaps = 47/288 (16%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           I   L +    G          +     P +SP+ +K+ +A+ D      +Y +++    
Sbjct: 336 IHGQLFLTKVPGGGKATRLTEHEFADSNPAWSPDGKKILFAS-DRGGTTDLYALESDDPE 394

Query: 249 APK----------RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
             +          ++    S  L P FS  G R     +      ++ +    +    L 
Sbjct: 395 HSELVKAHKFKTTKLTATTSEELNPTFSPAGDRVAFVREG----KLWLMRPNGSEQRVLV 450

Query: 299 NT-LFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +    ++    ++PD   I +   D     ++Y+  ++G+              D  WS 
Sbjct: 451 SAQKVLDYD--WAPDGKHIAYCRMDGSFAAEVYIQATDGTGTPVNVSRHATWNSDVSWSR 508

Query: 357 QGDLIAFTKFSGEKFAIGVMKK-----DGSQ----------------ERLLVEDSNLQAP 395
               +AF       + + V+       DG                  ER     +     
Sbjct: 509 TNGKLAFVGQRRGAYGVHVVSLQKPVADGGTRPPADQIDWDDLHLRVERPTTMSAEYG-- 566

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           T SP G  + F     GD    L+ +  NG+  T +        P W+
Sbjct: 567 TVSPDGSQVAFRSASSGD---DLWVVSSNGQALTRMTN--GNQTPSWI 609



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 98/276 (35%), Gaps = 36/276 (13%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
              +  +      V+      +  ++  G   R +T   +     P FSP+ + +A+++ 
Sbjct: 26  FARTPDISPDGKTVAFSYLGDIWTVEAIGGVARPVT-MHEAHDVNPVFSPDGRLIAFSSN 84

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----AMDIYSV 287
                     + +     P+R+    +  +   ++ +GK  + S  +        + + V
Sbjct: 85  RFGQ--YDVFVVSAAGGKPRRLTFDSAPDMVTGWTPDGKGVVFSSPRSVAYPINTECFVV 142

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREG-----KEQLYVMQSNGSD 337
             +  A  +L   LF    A ++P    + F        R G      + +++   +GS+
Sbjct: 143 PAEGGAERKL--NLFEAKEAYFAPTGGAVAFVRGPGTWYRRGYRGSSNDDIWISGPDGSN 200

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---------KKDGSQERLLVE 388
            KR++   +     P+++P    + +   S  K     +            G  +R+   
Sbjct: 201 PKRVTT-FDGQDSYPMFAPDARQLFYVTESQSKPGCANVVRQPLAPDFTPAGPAKRITAH 259

Query: 389 DSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           D + ++    S +G  +++      + G+ L+    
Sbjct: 260 DDDTVRRARLSANGDWIVY------ELGADLWVASA 289



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/338 (15%), Positives = 109/338 (32%), Gaps = 55/338 (16%)

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
            Q+   K      + R   H  +D      +      + + +  +          +L   
Sbjct: 338 GQLFLTKVPGGGKATRLTEHEFAD------SNPAWSPDGKKILFASDRGGTTDLYALESD 391

Query: 197 DRDGANI-------RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           D + + +            +       P FSP   +VA+            L   R + +
Sbjct: 392 DPEHSELVKAHKFKTTKLTATTSEELNPTFSPAGDRVAFVREGK-------LWLMRPNGS 444

Query: 250 PKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQS-NATERLTNTLFINISA 307
            +R+      +L   ++ +GK      +    A ++Y            ++     N   
Sbjct: 445 EQRVLVSAQKVLDYDWAPDGKHIAYCRMDGSFAAEVYIQATDGTGTPVNVSRHATWNSDV 504

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQ-----SNGSDQK------------RISQDKEASYF 350
           S+S  + ++ F   R G   ++V+      ++G  +             R+ +    S  
Sbjct: 505 SWSRTNGKLAFVGQRRGAYGVHVVSLQKPVADGGTRPPADQIDWDDLHLRVERPTTMSAE 564

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               SP G  +AF   S     + V+  +G     +      Q P+W      + +S+K 
Sbjct: 565 YGTVSPDGSQVAFRSASSGD-DLWVVSSNGQALTRMTNG--NQTPSW------IRWSKKS 615

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYAS---DPQWVGF 445
            G     +Y ++ +G+   L    ++ S   DP  V F
Sbjct: 616 HGT----VYFLNGSGQLCYLRTGFSFGSPPLDPTRVPF 649



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 94/312 (30%), Gaps = 83/312 (26%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  + V+   G   R LT      +    ++P+ + V +++         Y ++T    
Sbjct: 87  GQYDVFVVSAAGGKPRRLTFDSAPDMVT-GWTPDGKGVVFSS----PRSVAYPINTECFV 141

Query: 249 APKRIGNFRSMILAPR----FSSNGKRALIS----------VQKDEAMDIYSVDLQSNAT 294
            P   G  R + L       F+  G                 +     DI+      +  
Sbjct: 142 VPAEGGAERKLNLFEAKEAYFAPTGGAVAFVRGPGTWYRRGYRGSSNDDIWISGPDGSNP 201

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ--------SNGSDQKRISQDKE 346
           +R+T     +    ++PD+ Q+ + ++ + K     +         +     KRI+   +
Sbjct: 202 KRVTTFDGQDSYPMFAPDARQLFYVTESQSKPGCANVVRQPLAPDFTPAGPAKRITAHDD 261

Query: 347 ASYFDPVWSPQGDLIAFT-------------------------------------KFSGE 369
            +      S  GD I +                                           
Sbjct: 262 DTVRRARLSANGDWIVYELGADLWVASARSDLPPRKLAIEVNADDKSNTERTHTYTRDAT 321

Query: 370 KFAIG---------------VMKKDGSQ-ERLLVE-DSNLQAPTWSPSGRSLIFSRKKDG 412
           ++A+                + K  G      L E +     P WSP G+ ++F+  + G
Sbjct: 322 EYALAPDEQHAVLVIHGQLFLTKVPGGGKATRLTEHEFADSNPAWSPDGKKILFASDRGG 381

Query: 413 DTGSKLYSIDLN 424
            T   LY+++ +
Sbjct: 382 TT--DLYALESD 391


>gi|221212545|ref|ZP_03585522.1| WD40 domain protein beta Propeller [Burkholderia multivorans CGD1]
 gi|221167644|gb|EEE00114.1| WD40 domain protein beta Propeller [Burkholderia multivorans CGD1]
          Length = 640

 Score =  126 bits (316), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 56/270 (20%), Positives = 97/270 (35%), Gaps = 44/270 (16%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-- 279
           +  K     Y          +         R+           FS +GK  + + ++D  
Sbjct: 32  DGSKGDLLLYRIGPTTSELYIANADGSDEHRLIASGGFDYHGSFSPDGKWVVFTSERDGL 91

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSP-DSSQIVFESDRE-----GKEQLYVMQS 333
               +Y V +     +RLT+   ++ +A Y P D   I F S R      G   ++ +  
Sbjct: 92  GHASLYRVRIDGTGLQRLTDWTGVSDAAVYDPADPDVIAFVSSRRDNDTWGTTNIWTLNL 151

Query: 334 NGSDQKRIS------QDKEASYFDPVWSPQGDLIAFTKFSGEKFA--------------- 372
                  ++       DK  S+F P WSP G  IAF+   G ++                
Sbjct: 152 KTGALHNVTGDIRFDPDKPHSFFRPSWSPDGKWIAFSSDLGTEWRGHNLPVGWERTQETA 211

Query: 373 IGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKK------------DGDTGSKL 418
           I  ++ DG+  R +         +P+WS  G+ ++F                 G   S++
Sbjct: 212 IYEIRPDGTGFRQIAARAGYADGSPSWSNDGKQIVFYETPVESTWGAHRPEAIGKVSSQI 271

Query: 419 YSIDL-NGRNETLINTPAYASDPQWVGFMD 447
             +D+  G  + L +TP +   PQ+VG  D
Sbjct: 272 VQVDVATGVRKQLTDTPGFKVFPQYVGATD 301



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 64/342 (18%), Positives = 121/342 (35%), Gaps = 50/342 (14%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHT------ISDDIYQ---------SITGEKGDFNSRIL 178
            D KQI+   F+ +P      AH       +S  I Q          +T   G F     
Sbjct: 240 NDGKQIV---FYETPVESTWGAHRPEAIGKVSSQIVQVDVATGVRKQLTDTPG-FKVFPQ 295

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +V  + V+  +KN         A     T      +  PR+S + +KV Y          
Sbjct: 296 YVGATDVAYHVKNGAAEGLYTTAGQSRATAGSG--IRSPRYSADGKKVVYEKVVYSKPFH 353

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----------VQKDEAMDIYSVD 288
              M            N+R + + P+ S +GK  + +             D +   +  D
Sbjct: 354 PNGMPLYRFDPQ---WNYRFVDVFPQLSRDGKSLVYTEKAVGSSIVVADTDFSHARHIYD 410

Query: 289 LQSNA--TERLTNTLFINISASYSPDSSQIVFES-----DREGKE-QLYVMQSNGS--DQ 338
             ++    + +   L      ++SPD   +VF        R     ++  ++++GS   +
Sbjct: 411 PATSGLDPKLVAMGLAGAFQPTWSPDKQWVVFGVGSWFFTRAHMPGRIARIRADGSMNGK 470

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             I  D + +   P +SP G  I +  +S     + ++  +  +  +L  + +   P WS
Sbjct: 471 PEILTDGKENAGFPSYSPDGTRIVYRVWSETDKGLRILDLNTRKTMVLTTEPD-NLPGWS 529

Query: 399 PSGRSLIFSR-----KKDGDTGSKLYSIDLNGRNETLINTPA 435
           P G  ++F+R              +Y+I  +G +   +  P 
Sbjct: 530 PDGTRIVFTRKEVNPNDANKFHFDVYTIKPDGTDVRRLTPPG 571



 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 78/215 (36%), Gaps = 33/215 (15%)

Query: 214 LFEPRFSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            F+P +SP++Q V +               +     D  ++  P+ + + +     P +S
Sbjct: 428 AFQPTWSPDKQWVVFGVGSWFFTRAHMPGRIARIRADGSMNGKPEILTDGKENAGFPSYS 487

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G R +  V  +    +  +DL +  T  LT     +    +SPD ++IVF        
Sbjct: 488 PDGTRIVYRVWSETDKGLRILDLNTRKTMVLTTEP--DNLPGWSPDGTRIVFTRKEVNPN 545

Query: 327 -------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---------- 369
                   +Y ++ +G+D +R++    A+     W+  G  IA++               
Sbjct: 546 DANKFHFDVYTIKPDGTDVRRLTPPG-ANQAHATWTWDGR-IAYSSGEYGFRDELSLYDD 603

Query: 370 ----KFAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
                    VM  DGS    + +       P + P
Sbjct: 604 TFQPDGQNWVMNADGSDRHAITDTLWEDSMPLYIP 638



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 106/345 (30%), Gaps = 93/345 (26%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY--- 240
                 + ++  +  DG   R +          P +S + +++ +     E     +   
Sbjct: 203 GWERTQETAIYEIRPDGTGFRQIAARAGYADGSPSWSNDGKQIVFYETPVESTWGAHRPE 262

Query: 241 ---------LMDTRIDRAPKRIGNFRSM-------------------------------- 259
                    +         K++ +                                    
Sbjct: 263 AIGKVSSQIVQVDVATGVRKQLTDTPGFKVFPQYVGATDVAYHVKNGAAEGLYTTAGQSR 322

Query: 260 ------ILAPRFSSNGKRALI---SVQKDEAMD---IYSVDLQSNATERLTNTLFINISA 307
                 I +PR+S++GK+ +       K    +   +Y  D Q        N  F+++  
Sbjct: 323 ATAGSGIRSPRYSADGKKVVYEKVVYSKPFHPNGMPLYRFDPQW-------NYRFVDVFP 375

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD------------KEASYFDPVWS 355
             S D   +V+     G   + V  ++ S  + I                 A  F P WS
Sbjct: 376 QLSRDGKSLVYTEKAVGSS-IVVADTDFSHARHIYDPATSGLDPKLVAMGLAGAFQPTWS 434

Query: 356 PQGDLIAFT------KFSGEKFAIGVMKKDG---SQERLLVEDS-NLQAPTWSPSGRSLI 405
           P    + F         +     I  ++ DG    +  +L +   N   P++SP G  ++
Sbjct: 435 PDKQWVVFGVGSWFFTRAHMPGRIARIRADGSMNGKPEILTDGKENAGFPSYSPDGTRIV 494

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINT-----PAYASDPQWVGF 445
           +    + D G ++  +DLN R   ++ T     P ++ D   + F
Sbjct: 495 YRVWSETDKGLRI--LDLNTRKTMVLTTEPDNLPGWSPDGTRIVF 537


>gi|320106816|ref|YP_004182406.1| hypothetical protein AciPR4_1592 [Terriglobus saanensis SP1PR4]
 gi|319925337|gb|ADV82412.1| hypothetical protein AciPR4_1592 [Terriglobus saanensis SP1PR4]
          Length = 650

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 51/295 (17%), Positives = 99/295 (33%), Gaps = 39/295 (13%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR-I 246
             +  + +   +G   + +T S++      ++S +  ++AY +  D   + V   D + +
Sbjct: 54  QERGQIALKPVEGGPAKLITHSQEPKSEL-QWSHDGGRIAYISKGDVWTVEVSGGDLKQL 112

Query: 247 DRAPKRIGNFRSMI-LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-- 303
              P   G+ R      P ++ NGK  L    +    ++Y V       + L  T     
Sbjct: 113 THDPAGPGDPRGATDHHPLWNPNGKWILYQSGRKGFNELYVVGDDGKEEKLLAATEIYEG 172

Query: 304 --------------------NISASYSPDSSQIVFE-SDR---EGKEQLYVMQSNGSDQK 339
                               + + S+SPD ++I +    R    GK ++ V         
Sbjct: 173 DDVIANTAQDKGDAVSSDRFDPNPSWSPDGTRISYTERSRQFFSGKLKVLVFDQATGTAG 232

Query: 340 RI--------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DS 390
                           +     WSP    +A          I ++   G + + L +   
Sbjct: 233 ASIDLYTAKNDPGGAWAVNTASWSPNSSKLAVILQESAWDKIWLISSKGGKPQQLTKGTG 292

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASDPQWVG 444
             + P +SP G+ ++F+  +D      L+ I    G    L +     S PQW  
Sbjct: 293 EDENPVYSPDGKWIVFTSNRDLAEERHLWLIPSSGGAPRRLTHLSGNESAPQWSP 347



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 14/172 (8%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIG-----NFRSMI 260
           S D+    P +SP+  +++Y           L+V + D     A   I      N     
Sbjct: 188 SSDRFDPNPSWSPDGTRISYTERSRQFFSGKLKVLVFDQATGTAGASIDLYTAKNDPGGA 247

Query: 261 LA---PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            A     +S N  +  + +Q+     I+ +  +    ++LT     + +  YSPD   IV
Sbjct: 248 WAVNTASWSPNSSKLAVILQESAWDKIWLISSKGGKPQQLTKGTGEDENPVYSPDGKWIV 307

Query: 318 FESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           F S+R+   +  L+++ S+G   +R++     +   P WSP G  I F++ +
Sbjct: 308 FTSNRDLAEERHLWLIPSSGGAPRRLTHLS-GNESAPQWSPDGTKIYFSRST 358



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 63/327 (19%), Positives = 117/327 (35%), Gaps = 68/327 (20%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +  ++R QI  K     PA    I H+         + + G    RI ++S        K
Sbjct: 51  FATQERGQIALKPVEGGPAKL--ITHSQEPKSELQWSHDGG----RIAYIS--------K 96

Query: 191 NSLCVMDRDGANIRYLTPS-------RDQILFEPRFSPNQQKVAYATYDDE--------- 234
             +  ++  G +++ LT         R      P ++PN + + Y +             
Sbjct: 97  GDVWTVEVSGGDLKQLTHDPAGPGDPRGATDHHPLWNPNGKWILYQSGRKGFNELYVVGD 156

Query: 235 --------DILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRALISVQK----D 279
                       +Y  D  I    +  G+  S       P +S +G R   + +      
Sbjct: 157 DGKEEKLLAATEIYEGDDVIANTAQDKGDAVSSDRFDPNPSWSPDGTRISYTERSRQFFS 216

Query: 280 EAMDIYSVDLQSNATERLTNTLFINI--------------SASYSPDSSQIVFESDREGK 325
             + +   D  +      T    I++              +AS+SP+SS++         
Sbjct: 217 GKLKVLVFDQATG-----TAGASIDLYTAKNDPGGAWAVNTASWSPNSSKLAVILQESAW 271

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQE 383
           ++++++ S G   +++++       +PV+SP G  I FT      E+  + ++   G   
Sbjct: 272 DKIWLISSKGGKPQQLTKGT-GEDENPVYSPDGKWIVFTSNRDLAEERHLWLIPSSGGAP 330

Query: 384 RLLVE-DSNLQAPTWSPSGRSLIFSRK 409
           R L     N  AP WSP G  + FSR 
Sbjct: 331 RRLTHLSGNESAPQWSPDGTKIYFSRS 357



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 1/76 (1%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
             V  S      +  L ++   G   R LT         P++SP+  K+ ++        
Sbjct: 305 WIVFTSNRDLAEERHLWLIPSSGGAPRRLTH-LSGNESAPQWSPDGTKIYFSRSTALHGP 363

Query: 238 RVYLMDTRIDRAPKRI 253
             Y+ +T        +
Sbjct: 364 SSYVAETAATGEAHPL 379


>gi|221196873|ref|ZP_03569920.1| WD40 domain protein beta Propeller [Burkholderia multivorans CGD2M]
 gi|221203543|ref|ZP_03576562.1| WD40 domain protein beta Propeller [Burkholderia multivorans CGD2]
 gi|221177477|gb|EEE09905.1| WD40 domain protein beta Propeller [Burkholderia multivorans CGD2]
 gi|221183427|gb|EEE15827.1| WD40 domain protein beta Propeller [Burkholderia multivorans CGD2M]
          Length = 640

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 56/270 (20%), Positives = 97/270 (35%), Gaps = 44/270 (16%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-- 279
           +  K     Y          +         R+           FS +GK  + + ++D  
Sbjct: 32  DGSKGDLLLYRIGPTTSELYIANADGSDEHRLIASGGFDYHGSFSPDGKWVVFTSERDGL 91

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSP-DSSQIVFESDRE-----GKEQLYVMQS 333
               +Y V +     +RLT+   ++ +A Y P D   I F S R      G   ++ +  
Sbjct: 92  GHASLYRVRIDGTGLQRLTDWTGVSDAAVYDPADPDVIAFVSSRRDNDTWGTTNIWTLNL 151

Query: 334 NGSDQKRIS------QDKEASYFDPVWSPQGDLIAFTKFSGEKFA--------------- 372
                  ++       DK  S+F P WSP G  IAF+   G ++                
Sbjct: 152 KTGALHNVTGDIRFDPDKPHSFFRPSWSPDGKWIAFSSDLGTEWRGHNLPVGWERTQETA 211

Query: 373 IGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKK------------DGDTGSKL 418
           I  ++ DG+  R +         +P+WS  G+ ++F                 G   S++
Sbjct: 212 IYEIRPDGTGFRQIAARAGYADGSPSWSNDGKQIVFYETPVESTWGAHRPEAIGKVSSQI 271

Query: 419 YSIDL-NGRNETLINTPAYASDPQWVGFMD 447
             +D+  G  + L +TP +   PQ+VG  D
Sbjct: 272 VQVDVATGVRKQLTDTPGFKVFPQYVGATD 301



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 63/342 (18%), Positives = 120/342 (35%), Gaps = 50/342 (14%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHT------ISDDIYQ---------SITGEKGDFNSRIL 178
            D KQI+   F+ +P      AH       +S  I Q          +T   G F     
Sbjct: 240 NDGKQIV---FYETPVESTWGAHRPEAIGKVSSQIVQVDVATGVRKQLTDTPG-FKVFPQ 295

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +V  + V+  +KN         A     T      +  PR+S + +KV Y          
Sbjct: 296 YVGATDVAYQVKNGAAEGLYTTAGQSRATAGSG--IRSPRYSADGKKVVYEKVVYSKPFH 353

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----------VQKDEAMDIYSVD 288
              M            N+R + + P+ S +GK  + +             D +   +  D
Sbjct: 354 PNGMPLYRFDPQ---WNYRFVDVFPQLSRDGKSLVYTEKAVGSSIVVADTDFSHARHIYD 410

Query: 289 LQSNA--TERLTNTLFINISASYSPDSSQIVFES-----DREGKE-QLYVMQSNGS--DQ 338
             ++    + +   L      ++SPD   + F        R     ++  ++++GS   +
Sbjct: 411 PATSGLDPKLVAMGLAGAFQPTWSPDKQWVAFGVGSWFFTRAHMPGRIARIRADGSMNGK 470

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             I  D + +   P +SP G  I +  +S     + ++  +  +  +L  + +   P WS
Sbjct: 471 PEILTDGKENAGFPSYSPDGTRIVYRVWSETDKGLRILDLNTRKTMVLTTEPD-NLPGWS 529

Query: 399 PSGRSLIFSR-----KKDGDTGSKLYSIDLNGRNETLINTPA 435
           P G  ++F+R              +Y+I  +G +   +  P 
Sbjct: 530 PDGTRIVFTRKEVNPNDANKFHFDVYTIKPDGTDVRRLTPPG 571



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 79/215 (36%), Gaps = 33/215 (15%)

Query: 214 LFEPRFSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            F+P +SP++Q VA+               +     D  ++  P+ + + +     P +S
Sbjct: 428 AFQPTWSPDKQWVAFGVGSWFFTRAHMPGRIARIRADGSMNGKPEILTDGKENAGFPSYS 487

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G R +  V  +    +  +DL +  T  LT     +    +SPD ++IVF        
Sbjct: 488 PDGTRIVYRVWSETDKGLRILDLNTRKTMVLTTEP--DNLPGWSPDGTRIVFTRKEVNPN 545

Query: 327 -------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---------- 369
                   +Y ++ +G+D +R++    A+     W+  G  IA++               
Sbjct: 546 DANKFHFDVYTIKPDGTDVRRLTPPG-ANQAHATWTWDGR-IAYSSGEYGFRDELSLYDD 603

Query: 370 ----KFAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
                    VM  DGS    + +       P + P
Sbjct: 604 TFQPDGQNWVMNADGSDRHAITDTLWEDSMPLYIP 638



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 53/345 (15%), Positives = 107/345 (31%), Gaps = 93/345 (26%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY--- 240
                 + ++  +  DG   R +          P +S + +++ +     E     +   
Sbjct: 203 GWERTQETAIYEIRPDGTGFRQIAARAGYADGSPSWSNDGKQIVFYETPVESTWGAHRPE 262

Query: 241 ---------LMDTRIDRAPKRIGNFRSM-------------------------------- 259
                    +         K++ +                                    
Sbjct: 263 AIGKVSSQIVQVDVATGVRKQLTDTPGFKVFPQYVGATDVAYQVKNGAAEGLYTTAGQSR 322

Query: 260 ------ILAPRFSSNGKRALI---SVQKDEAMD---IYSVDLQSNATERLTNTLFINISA 307
                 I +PR+S++GK+ +       K    +   +Y  D Q        N  F+++  
Sbjct: 323 ATAGSGIRSPRYSADGKKVVYEKVVYSKPFHPNGMPLYRFDPQW-------NYRFVDVFP 375

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD------------KEASYFDPVWS 355
             S D   +V+     G   + V  ++ S  + I                 A  F P WS
Sbjct: 376 QLSRDGKSLVYTEKAVGSS-IVVADTDFSHARHIYDPATSGLDPKLVAMGLAGAFQPTWS 434

Query: 356 PQGDLIAFT------KFSGEKFAIGVMKKDG---SQERLLVEDS-NLQAPTWSPSGRSLI 405
           P    +AF         +     I  ++ DG    +  +L +   N   P++SP G  ++
Sbjct: 435 PDKQWVAFGVGSWFFTRAHMPGRIARIRADGSMNGKPEILTDGKENAGFPSYSPDGTRIV 494

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINT-----PAYASDPQWVGF 445
           +    + D G ++  +DLN R   ++ T     P ++ D   + F
Sbjct: 495 YRVWSETDKGLRI--LDLNTRKTMVLTTEPDNLPGWSPDGTRIVF 537


>gi|256840125|ref|ZP_05545634.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739055|gb|EEU52380.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 1080

 Score =  126 bits (316), Expect = 9e-27,   Method: Composition-based stats.
 Identities = 61/337 (18%), Positives = 121/337 (35%), Gaps = 41/337 (12%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  ++D +  K              R    T        ++   G   +   F   +  S
Sbjct: 196 DIWMYDTQTGKH---TNLTDHAGEDRNAVFTPDGQTVYFLSERNGGSFNVYSFPLNTPQS 252

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                   V       +R+L+   DQ L    ++ + +   Y      +  +V +   R 
Sbjct: 253 IT-----AVTKFKTHPVRFLSTGSDQTLC---YTYDGE--IYTQRPGSNPQKVRIDLIRD 302

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D+      N      +   S +GK+   +++     +++      N T+++T+T      
Sbjct: 303 DQEQIADLNSSKGATSATVSPDGKQIAFTLRG----EVFVTSADYNTTKQITHTPAAETG 358

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPVWS 355
             +SPD+  + + S+R G  QLY+ +               +++ +   K      P +S
Sbjct: 359 ICFSPDNRTLAYASERGGNWQLYLAKIARKEEANFPNATIIEEEVLLPSKTVERNYPQFS 418

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFS 407
           P G  +AF +   ++  + V+  +  + R + + S   +       +WSP G+   L F 
Sbjct: 419 PDGKELAFIE---DRMRLMVVNLETKKVRQVTDGSTWYSTAGGFDYSWSPDGKWFTLRFI 475

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQWV 443
             K  D  S +  +   G   T +    Y S  PQWV
Sbjct: 476 GNKH-DPYSDIGLVSAQGGEITNLTNSGYTSTSPQWV 511



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 85/246 (34%), Gaps = 35/246 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S    P +S +GK+   +  +
Sbjct: 29  ISPDGTEIAFCY--KGDIYKV----PAKGGTATQLTTQASYECTPIWSPDGKQIAFASDR 82

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
           +   D++ +       + LT      I ++++PD   ++F +                 +
Sbjct: 83  NGNFDLFVMPSNGGTAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTE 142

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +   G   +++     A       S  G    +               S     I +
Sbjct: 143 LYKVPVGGGRTEQVL-GTPAEMVCFDKS--GKTFLYQDRKGFEDEWRKHHTSSVTRDIWM 199

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                 +   L +     +   ++P G+++ F  +++G +   +YS  LN   +++    
Sbjct: 200 YDTQTGKHTNLTDHAGEDRNAVFTPDGQTVYFLSERNGGS-FNVYSFPLN-TPQSITAVT 257

Query: 435 AYASDP 440
            + + P
Sbjct: 258 KFKTHP 263



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 74/215 (34%), Gaps = 34/215 (15%)

Query: 258 SMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           S  + P +      S +G       + D    IY V  +     +LT       +  +SP
Sbjct: 16  SYAVTPLWMRDVQISPDGTEIAFCYKGD----IYKVPAKGGTATQLTTQASYECTPIWSP 71

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
           D  QI F SDR G   L+VM SNG   + ++    AS     ++P G  + F+       
Sbjct: 72  DGKQIAFASDRNGNFDLFVMPSNGGTAQCLTT-HSASEIPSAFTPDGKYVLFSASIQDPA 130

Query: 367 ------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--------- 411
                 +     +  +   G +   ++     +   +  SG++ ++  +K          
Sbjct: 131 QSALFPTSAMTELYKVPVGGGRTEQVLGTP-AEMVCFDKSGKTFLYQDRKGFEDEWRKHH 189

Query: 412 -GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                  ++  D   G++  L +      +  +  
Sbjct: 190 TSSVTRDIWMYDTQTGKHTNLTDHAGEDRNAVFTP 224



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 73/217 (33%), Gaps = 32/217 (14%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +       
Sbjct: 40  YKGDIYKVPAKGGTATQLTTQAS-YECTPIWSPDGKQIAFASDRNGNFDLFVMPSN--GG 96

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-----------IYSVDLQSNATERL 297
             + +    +  +   F+ +GK  L S    +              +Y V +    TE++
Sbjct: 97  TAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTELYKVPVGGGRTEQV 156

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  +       ++ D
Sbjct: 157 LGTPAEMV--CFDKSGKTFLYQ-DRKGFEDEWRKHHTSSVTRDIWMYDTQTGKHTNLT-D 212

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDG 380
                 + V++P G  + F ++ +G  F +     + 
Sbjct: 213 HAGEDRNAVFTPDGQTVYFLSERNGGSFNVYSFPLNT 249



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 92/259 (35%), Gaps = 39/259 (15%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-- 263
           L PS+      P+FSP+ +++A+     ED +R+ +++    +  +++ +  +       
Sbjct: 404 LLPSKTVERNYPQFSPDGKELAFI----EDRMRLMVVNLET-KKVRQVTDGSTWYSTAGG 458

Query: 264 ---RFSSNGKR--ALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               +S +GK         K D   DI  V  Q      LTN+ + + S  +  D + I+
Sbjct: 459 FDYSWSPDGKWFTLRFIGNKHDPYSDIGLVSAQGGEITNLTNSGYTSTSPQWVLDGNAIL 518

Query: 318 FESDREG-----------KEQLYVMQSNGSDQKRISQDKE-------------ASYFDPV 353
           F ++R G              L  M  +  D+ R+S++                      
Sbjct: 519 FTTERYGMRAHASWGSLNDAMLVFMNQDAYDKFRLSKEDYELQKELEKEQKEVTGDKADD 578

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
              +           +   + +        RL    S + +   S +G +L +      +
Sbjct: 579 KKKEDKADEKKDEKPKDIVVELKGIQDRILRLTPNSSEMGSAVISKNGETLYYFS--AFE 636

Query: 414 TGSKLYSIDLNGRNETLIN 432
               L+ +DL  +   L++
Sbjct: 637 DKYDLWKMDLRKKETKLLH 655


>gi|134074975|emb|CAK39055.1| unnamed protein product [Aspergillus niger]
          Length = 649

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/312 (19%), Positives = 113/312 (36%), Gaps = 62/312 (19%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRI 246
           + L + + DG+N + L  S     F   +SP+ + V + +        DI RV +  T  
Sbjct: 18  SELYIAEPDGSNAKLLLGSNSVYDFRASWSPDAKHVYFTSERRGDGQADIYRVAINGTST 77

Query: 247 -DRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFIN 304
                + + +   +  +   S +GK    +  + ++   I  + L++ + + LT    I+
Sbjct: 78  VGAEVEPVASSPGVDDSASISPDGKMLAFATSRYNQTSQIMLMVLETGSLKNLTLIPGIS 137

Query: 305 -----------ISASYSPDSSQIVFESDR----------EGKEQ-----LYVMQSNGSDQ 338
                         ++SPD   IVF SDR           G E      +Y  + NG+D 
Sbjct: 138 EAANSALPNGYFKPTWSPDGEWIVFTSDRNTPWRGHSDGSGWEHTQELSIYAARPNGTDF 197

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKF-----------------SGEKFAIGVMKKDGS 381
           + +S     +   P +SP G  + F +                  S    +I  +     
Sbjct: 198 RLVSSRSNYTQGSPRFSPNGKRLVFYEMLTEDTYNGRLQPELLEGSYLNTSIVSIDFATG 257

Query: 382 QERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL-------IN 432
            +R++    D    +P++      + +  K+    G  +Y   L+G+N T          
Sbjct: 258 GDRIVHATGDGTKISPSFVTD-DVIGYVMKESASNG--IYYTSLSGKNYTQYQTIPMNTM 314

Query: 433 TPAYASDPQWVG 444
           TPA    P W  
Sbjct: 315 TPA-LRSPAWSP 325



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 46/225 (20%), Positives = 82/225 (36%), Gaps = 40/225 (17%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
            +   +Y+ +     A   +G+         +S + K    + ++  D   DIY V +  
Sbjct: 15  PNYSELYIAEPDGSNAKLLLGSNSVYDFRASWSPDAKHVYFTSERRGDGQADIYRVAING 74

Query: 292 N-----ATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRIS--- 342
                   E + ++  ++ SAS SPD   + F + R     Q+ +M       K ++   
Sbjct: 75  TSTVGAEVEPVASSPGVDDSASISPDGKMLAFATSRYNQTSQIMLMVLETGSLKNLTLIP 134

Query: 343 -------QDKEASYFDPVWSPQGDLIAFTKFSGEKFA---------------IGVMKKDG 380
                        YF P WSP G+ I FT      +                I   + +G
Sbjct: 135 GISEAANSALPNGYFKPTWSPDGEWIVFTSDRNTPWRGHSDGSGWEHTQELSIYAARPNG 194

Query: 381 SQERLLVEDSNL--QAPTWSPSGRSLIFSR-----KKDGDTGSKL 418
           +  RL+   SN    +P +SP+G+ L+F         +G    +L
Sbjct: 195 TDFRLVSSRSNYTQGSPRFSPNGKRLVFYEMLTEDTYNGRLQPEL 239



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 53/382 (13%), Positives = 120/382 (31%), Gaps = 69/382 (18%)

Query: 113 TGRVIKEGKDRLRVEFRLW--DVKDRK---QIIGKKFFSS-------PASWRKIAHTISD 160
            G        +  V + +   D  + +   +++   + ++            +I H   D
Sbjct: 208 QGSPRFSPNGKRLVFYEMLTEDTYNGRLQPELLEGSYLNTSIVSIDFATGGDRIVHATGD 267

Query: 161 DIYQSITGEKGDFNS--RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
                 T     F +   I +V +   S  I  +                +    L  P 
Sbjct: 268 -----GTKISPSFVTDDVIGYVMKESASNGIYYTSLSGKNYTQYQTIPMNTMTPALRSPA 322

Query: 219 FSPNQQKVAY---------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           +SP+ + V Y          +   +    ++  D   D     +         P      
Sbjct: 323 WSPDGKYVIYEKQGPTGGSTSTSKKQYSDLWNFDPDWDYRFTDVFPMAKRGGCP------ 376

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLT---------------NTLFINISASYSPD-- 312
               +S Q +   +   + LQ N T+++T                        S+ P+  
Sbjct: 377 -MMAMSQQMEGVAESNLMRLQMNGTDQVTLFETKKGMINPSIAEGFNARAYQGSWGPNDT 435

Query: 313 ----SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                    F   +     ++ +   G+    ++ +   +Y  P ++  G  + F  + G
Sbjct: 436 NITFGYGAYFVGRQSSPGFIFSVTPEGTGVTLLAGNNITNYGFPSYNYDGTQVVFRTWPG 495

Query: 369 EKFA--------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT---GSK 417
                       + ++     Q   L  + +   P +SP G+ ++F+R+ + D       
Sbjct: 496 TASNGTTVGTTGLAIVDLPSRQVTQLTTEWD-NLPAFSPDGKKILFTRRTNLDNIGDNYD 554

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           +++++ +G   T + TP+ ASD
Sbjct: 555 IFTMNPDGSELTKL-TPSIASD 575



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 54/145 (37%), Gaps = 25/145 (17%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQ- 382
            +LY+ + +GS+ K +        F   WSP    + FT  +    +  I  +  +G+  
Sbjct: 18  SELYIAEPDGSNAKLLLGSNSVYDFRASWSPDAKHVYFTSERRGDGQADIYRVAINGTST 77

Query: 383 -----ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG--RNETLINT-- 433
                E +        + + SP G+ L F+  +   T   +  +   G  +N TLI    
Sbjct: 78  VGAEVEPVASSPGVDDSASISPDGKMLAFATSRYNQTSQIMLMVLETGSLKNLTLIPGIS 137

Query: 434 -------------PAYASDPQWVGF 445
                        P ++ D +W+ F
Sbjct: 138 EAANSALPNGYFKPTWSPDGEWIVF 162



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 59/366 (16%), Positives = 110/366 (30%), Gaps = 105/366 (28%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL----- 237
           S      + S+     +G + R ++   +     PRFSPN +++ +     ED       
Sbjct: 177 SGWEHTQELSIYAARPNGTDFRLVSSRSNYTQGSPRFSPNGKRLVFYEMLTEDTYNGRLQ 236

Query: 238 -----------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                       +  +D                 ++P F ++       +++  +  IY 
Sbjct: 237 PELLEGSYLNTSIVSIDFATGGDRIVHATGDGTKISPSFVTD-DVIGYVMKESASNGIYY 295

Query: 287 VDLQSNATERL------TNTLFINISASYSPDSSQIVFE----------------SD--- 321
             L      +       T T  +  S ++SPD   +++E                SD   
Sbjct: 296 TSLSGKNYTQYQTIPMNTMTPAL-RSPAWSPDGKYVIYEKQGPTGGSTSTSKKQYSDLWN 354

Query: 322 -----------------REGKE--------------QLYVMQSNGSDQ------------ 338
                            R G                 L  +Q NG+DQ            
Sbjct: 355 FDPDWDYRFTDVFPMAKRGGCPMMAMSQQMEGVAESNLMRLQMNGTDQVTLFETKKGMIN 414

Query: 339 KRISQDKEASYFDPVWSPQGDLI------AFTKFSGEKFAIGVMKKDGSQERLLVED--S 390
             I++   A  +   W P    I       F         I  +  +G+   LL  +  +
Sbjct: 415 PSIAEGFNARAYQGSWGPNDTNITFGYGAYFVGRQSSPGFIFSVTPEGTGVTLLAGNNIT 474

Query: 391 NLQAPTWSPSGRSLIF------SRKKDGDTGSKLYSIDLNGRNETLINT-----PAYASD 439
           N   P+++  G  ++F      +        + L  +DL  R  T + T     PA++ D
Sbjct: 475 NYGFPSYNYDGTQVVFRTWPGTASNGTTVGTTGLAIVDLPSRQVTQLTTEWDNLPAFSPD 534

Query: 440 PQWVGF 445
            + + F
Sbjct: 535 GKKILF 540



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 79/206 (38%), Gaps = 27/206 (13%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F     FV      G     +  +  +G  +  L  +       P ++ +  +V + T+ 
Sbjct: 439 FGYGAYFVGRQSSPGF----IFSVTPEGTGVTLLAGNNITNYGFPSYNYDGTQVVFRTWP 494

Query: 233 DEDILRVYLMDTR---IDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKD-----EAMD 283
                   +  T    +D   +++    +     P FS +GK+ L + + +     +  D
Sbjct: 495 GTASNGTTVGTTGLAIVDLPSRQVTQLTTEWDNLPAFSPDGKKILFTRRTNLDNIGDNYD 554

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSS-------------QIVFESDREGKEQLYV 330
           I++++   +   +LT ++  +  A ++ D                 +++   +    + +
Sbjct: 555 IFTMNPDGSELTKLTPSIASDAHAVWTQDGRILYSTAMFGFQQEAPLYDDSMQPYAIIML 614

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSP 356
           M+++GS++  +S +       P+++P
Sbjct: 615 MEADGSNKTALS-NSLWEDAMPMFAP 639


>gi|269837019|ref|YP_003319247.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269786282|gb|ACZ38425.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 665

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 56/331 (16%), Positives = 107/331 (32%), Gaps = 76/331 (22%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
               ++S+ V+  DG   R  T S D     PR+SP+  ++A+ +           M + 
Sbjct: 45  KNDYRSSIFVVPVDGGTPRRFT-SADARDSFPRWSPDGSRIAFLSNRTGK--SQVWMISV 101

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------------------- 277
                 ++ +    +    +S +G    +  +                            
Sbjct: 102 DGGEATQVTDLPEGVTYFAWSPDGSTLALVSKTEAAQLEKREGDEEDEEKSDVVRITRIR 161

Query: 278 ----------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-- 325
                      D+   I+ +        ++T+  F +    +SP   +I F S+R     
Sbjct: 162 FRADGVSGFLDDKRSHIWCIPAAGGDPWQVTSGDFDDAWPVWSPGGHEIAFVSNRTEDRE 221

Query: 326 ----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEKFAIGVMK 377
                +++ + + G + + I+   +A +  PVWS  G  IAF        G      V  
Sbjct: 222 YNTVSEIWAVPARGGEARPIATGDDAYFGRPVWSVDGAAIAFAGHRQPEAGGAIDSHVWV 281

Query: 378 KDGSQERLLVED---------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            DG   R L E                S      W+P G  + F     G+T   +Y + 
Sbjct: 282 ADGGATRCLTEGLGRTVGDAGINDTFASANPGLAWTPDG-WIYFQVSDSGNT--HVYRVP 338

Query: 423 LNGRNETLINTP-------AYASDPQWVGFM 446
             G + +L+          + + D   + F+
Sbjct: 339 AGGGDPSLVVGGQRRVLDFSLSPDGSRIAFV 369



 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 80/237 (33%), Gaps = 52/237 (21%)

Query: 258 SMILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +++   + S +G+    +         D    I+ V +      R T+    +    +SP
Sbjct: 20  TLVSDAQISPDGRHVAYTQTILDKEKNDYRSSIFVVPVDGGTPRRFTSADARDSFPRWSP 79

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------ 365
           D S+I F S+R GK Q++++  +G +  +++   E       WSP G  +A         
Sbjct: 80  DGSRIAFLSNRTGKSQVWMISVDGGEATQVTDLPEG-VTYFAWSPDGSTLALVSKTEAAQ 138

Query: 366 --------------------------------FSGEKFAIGVMKKDGSQERLLVE-DSNL 392
                                              ++  I  +   G     +   D + 
Sbjct: 139 LEKREGDEEDEEKSDVVRITRIRFRADGVSGFLDDKRSHIWCIPAAGGDPWQVTSGDFDD 198

Query: 393 QAPTWSPSGRSLIFSRKKDGD----TGSKLYSIDLNGRNETLINTP--AYASDPQWV 443
             P WSP G  + F   +  D    T S+++++   G     I T   AY   P W 
Sbjct: 199 AWPVWSPGGHEIAFVSNRTEDREYNTVSEIWAVPARGGEARPIATGDDAYFGRPVWS 255



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 95/319 (29%), Gaps = 68/319 (21%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           SRI F+S        K+ + ++  DG     +T   + + +   +SP+   +A  +    
Sbjct: 82  SRIAFLSNRTG----KSQVWMISVDGGEATQVTDLPEGVTYF-AWSPDGSTLALVSKTEA 136

Query: 232 -----------DDEDILRVYLMDTR----------------------IDRAPKRIGNFRS 258
                      D+E    V +   R                          P ++ +   
Sbjct: 137 AQLEKREGDEEDEEKSDVVRITRIRFRADGVSGFLDDKRSHIWCIPAAGGDPWQVTSGDF 196

Query: 259 MILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERL-TNTLFINISASYSP 311
               P +S  G        + E  +      I++V  +      + T          +S 
Sbjct: 197 DDAWPVWSPGGHEIAFVSNRTEDREYNTVSEIWAVPARGGEARPIATGDDAYFGRPVWSV 256

Query: 312 DSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDP-------------VW 354
           D + I F   R     G    +V  ++G   + +++    +  D               W
Sbjct: 257 DGAAIAFAGHRQPEAGGAIDSHVWVADGGATRCLTEGLGRTVGDAGINDTFASANPGLAW 316

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGD 413
           +P G  I F         +  +   G    L+V     +   + SP G  + F      +
Sbjct: 317 TPDG-WIYFQVSDSGNTHVYRVPAGGGDPSLVVGGQRRVLDFSLSPDGSRIAFVAGDPLN 375

Query: 414 TGSKLYSIDLNGRNETLIN 432
               +Y    +G +E  + 
Sbjct: 376 P-CDVYVCRADGSDERRLT 393



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 76/224 (33%), Gaps = 21/224 (9%)

Query: 177 ILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           I FVS           + +  +   G   R +    D     P +S +   +A+A +   
Sbjct: 210 IAFVSNRTEDREYNTVSEIWAVPARGGEARPIATGDDAYFGRPVWSVDGAAIAFAGHRQP 269

Query: 235 DI-----LRVYLMDTRIDRA-----PKRIGN------FRSMILAPRFSSNGKRALISVQK 278
           +        V++ D    R       + +G+      F S      ++ +G      V  
Sbjct: 270 EAGGAIDSHVWVADGGATRCLTEGLGRTVGDAGINDTFASANPGLAWTPDG-WIYFQVSD 328

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSD 337
                +Y V         +       +  S SPD S+I F +        +YV +++GSD
Sbjct: 329 SGNTHVYRVPAGGGDPSLVVGGQRRVLDFSLSPDGSRIAFVAGDPLNPCDVYVCRADGSD 388

Query: 338 QKRISQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDG 380
           ++R++   E  +     S P+   +        +    VMK  G
Sbjct: 389 ERRLTAVNEEFFSSVALSQPEEFRVPSHADDRAEIHGWVMKPIG 432



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 10/79 (12%)

Query: 376 MKKDGSQERLLVED-----SNLQAPTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNGR 426
           M      +R L  +     + +     SP GR + +++     +  D  S ++ + ++G 
Sbjct: 1   MGASTGAKRRLTPEDIYNITLVSDAQISPDGRHVAYTQTILDKEKNDYRSSIFVVPVDGG 60

Query: 427 NETL-INTPAYASDPQWVG 444
                 +  A  S P+W  
Sbjct: 61  TPRRFTSADARDSFPRWSP 79


>gi|221133936|ref|ZP_03560241.1| amidohydrolase [Glaciecola sp. HTCC2999]
          Length = 1122

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/210 (23%), Positives = 91/210 (43%), Gaps = 34/210 (16%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK  +     D   DI+   ++    + LT     NI  + SP+  QI F SDR+G  
Sbjct: 81  PDGKHIVF----DTLGDIFISSIEGGDAQPLTQDFAWNIHPAVSPNGKQIAFISDRDGLS 136

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-----AFTKFSGEKFAIGVMKKDGS 381
            ++VM  +G++ ++++++K      P WSP G+ I       +  S     I +    G 
Sbjct: 137 NVWVMNRDGTELRQVTKEKNNIIHAPKWSPDGEYILVTKGIMSSRSIPAGEIWMYHHTGG 196

Query: 382 -----QERL--LVEDSNLQAPTWSPSGRSLIFSRKKDG--------DTGSKLYSIDL--- 423
                ++R+  L +  N+  P +S  G+ + F++   G        D  + +++I     
Sbjct: 197 TGLAIKKRVNGLKDQKNIADPAFSHDGQYIYFTQDITGGFRFNYNRDPLTSIFAITRINR 256

Query: 424 -NGRNETLINT------PAYASDPQWVGFM 446
            NG  E  I+       P  + D ++V F+
Sbjct: 257 ENGEEERFISGTGGAVVPTPSPDGRYVAFI 286



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 52/302 (17%), Positives = 101/302 (33%), Gaps = 45/302 (14%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-----PNQQKVAYATYDDED 235
           + S  S  +       D D  N  +     +    E  ++     P+ + + +      D
Sbjct: 36  TSSTDSETVTTEKRFADWDVLNPAFPLNEINVKSNELTWASLDVTPDGKHIVF------D 89

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            L    + +      + +    +  + P  S NGK+      +D   +++ ++       
Sbjct: 90  TLGDIFISSIEGGDAQPLTQDFAWNIHPAVSPNGKQIAFISDRDGLSNVWVMNRDGTELR 149

Query: 296 RLTNTL-FINISASYSPDSSQIVFE----SDRE-GKEQLYVMQSNGSDQKRISQDKEA-- 347
           ++T     I  +  +SPD   I+      S R     ++++    G     I +      
Sbjct: 150 QVTKEKNNIIHAPKWSPDGEYILVTKGIMSSRSIPAGEIWMYHHTGGTGLAIKKRVNGLK 209

Query: 348 ---SYFDPVWSPQGDLIAFTKFSGEKFAI--------------GVMKKDGSQERLLVEDS 390
              +  DP +S  G  I FT+     F                 + +++G +ER +    
Sbjct: 210 DQKNIADPAFSHDGQYIYFTQDITGGFRFNYNRDPLTSIFAITRINRENGEEERFISGTG 269

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-------AYASDPQWV 443
               PT SP GR + F R+    T   L+  DL   +E  I           + S+  + 
Sbjct: 270 GAVVPTPSPDGRYVAFIRRIQEKTA--LFLKDLETGSERAIYHDLERDMQEGFGSEGYFS 327

Query: 444 GF 445
            F
Sbjct: 328 YF 329



 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 58/313 (18%), Positives = 109/313 (34%), Gaps = 46/313 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F  RI   +   +  +   S   +  D           +       ++P+ Q++ +  +
Sbjct: 284 AFIRRIQEKTALFLKDLETGSERAIYHDLERDMQEGFGSEGYFSYFDWTPDSQELVF--W 341

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-------------------SSNGKRA 272
               I R+ + D  ++     + +      A RF                   S +GK+A
Sbjct: 342 TAGKIHRLNINDQSLNTLNINLNSNLKYADAVRFDVNVAPDNFDTKMLRWSQKSPDGKKA 401

Query: 273 LISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           L          +Y  DLQS  T+RLT           Y+ D   IV+ +  + K     +
Sbjct: 402 LFQA----LGKLYIRDLQSGKTKRLTKQNEHDEYYPRYANDGKSIVYTTWHDQKLGAVRI 457

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---------KFAIGVMKKDGSQ 382
            S    +  I   +   Y +P +SP G  + + KF+G          +  + V+  D   
Sbjct: 458 VSAKGGKGDIITSQPGHYVEPAFSPDGKKVTYRKFTGGYLLDPAYSIEPGLYVLDLDTKA 517

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS--KLYSIDLNGRNETLINTPAY---- 436
              + +      P +S +   + F+    G   S  +L S++L G ++      A     
Sbjct: 518 TTRISKQG--MQPHFSGANDRVYFTEYVSGTPYSETQLSSVNLAGEDKRTHLYGADKVSE 575

Query: 437 ---ASDPQWVGFM 446
              + D +WV F+
Sbjct: 576 YRLSHDNKWVAFV 588



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/304 (11%), Positives = 97/304 (31%), Gaps = 59/304 (19%)

Query: 192 SLCVMDRDGANIRYLTPSRDQI-----LFEPRFSPNQQKVAYATYDDEDILRVYLMD--- 243
            + +    G     +    + +     + +P FS + Q + +           Y  D   
Sbjct: 187 EIWMYHHTGGTGLAIKKRVNGLKDQKNIADPAFSHDGQYIYFTQDITGGFRFNYNRDPLT 246

Query: 244 --------TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                    R +   +R  +     + P  S +G+      +  E   ++  DL++ +  
Sbjct: 247 SIFAITRINRENGEEERFISGTGGAVVPTPSPDGRYVAFIRRIQEKTALFLKDLETGSER 306

Query: 296 RLTNTLFINIS-----------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
            + + L  ++              ++PDS ++VF +      +++ +  N      ++ +
Sbjct: 307 AIYHDLERDMQEGFGSEGYFSYFDWTPDSQELVFWT----AGKIHRLNINDQSLNTLNIN 362

Query: 345 KEASYFDP-------------------VW---SPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             ++                        W   SP G    F         + +      +
Sbjct: 363 LNSNLKYADAVRFDVNVAPDNFDTKMLRWSQKSPDGKKALFQALG----KLYIRDLQSGK 418

Query: 383 ERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            + L + +      P ++  G+S++++   D   G+        G+ + + + P +  +P
Sbjct: 419 TKRLTKQNEHDEYYPRYANDGKSIVYTTWHDQKLGAVRIVSAKGGKGDIITSQPGHYVEP 478

Query: 441 QWVG 444
            +  
Sbjct: 479 AFSP 482



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 66/217 (30%), Gaps = 61/217 (28%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +  S+     EP FSP+ +KV Y  +                            +L P +
Sbjct: 467 IITSQPGHYVEPAFSPDGKKVTYRKFT------------------------GGYLLDPAY 502

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S                 +Y +DL + AT R++      +   +S  + ++ F     G 
Sbjct: 503 SI-------------EPGLYVLDLDTKATTRISKQG---MQPHFSGANDRVYFTEYVSGT 546

Query: 326 E----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                QL  +   G D KR          +   S     +AF       +   V+    +
Sbjct: 547 PYSETQLSSVNLAGED-KRTHLYGADKVSEYRLSHDNKWVAFVYQ----YNTYVVPFVEN 601

Query: 382 QERLLVEDSNLQAPT------------WSPSGRSLIF 406
            +++ +  +    P             W+P   SL +
Sbjct: 602 GQKITISPTMTSLPVTQISARAGEYLNWAPDNDSLTW 638


>gi|213028843|ref|ZP_03343290.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 141

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 72/137 (52%), Gaps = 4/137 (2%)

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R   HT SD++++ +TG KG F +RI +V ++   G     L V D DG N +++    
Sbjct: 6   LRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTN-GGQFPYELRVSDYDGYN-QFVVHRS 63

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            Q L  P +SP+  K+AY T++        ++ T  + A +++ +F     AP FS +G 
Sbjct: 64  PQPLMSPAWSPDGSKLAYVTFESGR--SALVIQTLANGAVRQVASFPRHNGAPAFSPDGT 121

Query: 271 RALISVQKDEAMDIYSV 287
           +   ++ K  ++++Y +
Sbjct: 122 KLAFALSKTGSLNLYVM 138



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 48/147 (32%), Gaps = 12/147 (8%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DL 289
                  Y   T  D   +++   +             R    VQ +     Y +   D 
Sbjct: 1   MNKQWLRYAGHTASDEVFEKLTGIKGAFR--------TRIAYVVQTNGGQFPYELRVSDY 52

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                  +  +    +S ++SPD S++ + +   G+  L +        ++++     + 
Sbjct: 53  DGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHN- 111

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             P +SP G  +AF         + VM
Sbjct: 112 GAPAFSPDGTKLAFALSKTGSLNLYVM 138



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 7/112 (6%)

Query: 314 SQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           ++I +     G +   +L V   +G +Q  +          P WSP G  +A+  F   +
Sbjct: 30  TRIAYVVQTNGGQFPYELRVSDYDGYNQFVV-HRSPQPLMSPAWSPDGSKLAYVTFESGR 88

Query: 371 FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            A+ +        R +     +  AP +SP G  L F+  K G     LY +
Sbjct: 89  SALVIQTLANGAVRQVASFPRHNGAPAFSPDGTKLAFALSKTGS--LNLYVM 138


>gi|295687564|ref|YP_003591257.1| amidohydrolase [Caulobacter segnis ATCC 21756]
 gi|295429467|gb|ADG08639.1| amidohydrolase [Caulobacter segnis ATCC 21756]
          Length = 1111

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 80/200 (40%), Gaps = 15/200 (7%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+    A A   D+           +     RI       +    S +GK     +  D 
Sbjct: 30  PSATPAAGAVKSDKPEKWNVNAPPGVATREVRIAVDNGTWMNVDVSRDGKLIAFDLLGD- 88

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              IY++ +      R+   L  +    +SPD  +I F SDR G + ++VM  +GSD+++
Sbjct: 89  ---IYTLPIAGGTPTRIAEGLAYDQQPRFSPDGKRIAFTSDRAGGDNIWVMNVDGSDKRQ 145

Query: 341 ISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKKDGSQERLLVEDSN---- 391
           +++++      P WSP G  I       T  S     + V    G     LV+ ++    
Sbjct: 146 VTKEEFRLLNQPSWSPDGRFIVAKKHFTTGRSLGTGEVWVYHVSGGGGVQLVKRASEALQ 205

Query: 392 --LQAPTWSPSGRSLIFSRK 409
             L  P ++  G+S+ ++R 
Sbjct: 206 KELGEPIYAADGKSVFYTRN 225



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/236 (22%), Positives = 94/236 (39%), Gaps = 32/236 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + +A+    D     +Y +       P RI    +    PRFS +GKR   +  + 
Sbjct: 75  SRDGKLIAFDLLGD-----IYTLPI-AGGTPTRIAEGLAYDQQPRFSPDGKRIAFTSDRA 128

Query: 280 EAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV----FESDRE-GKEQLYVMQS 333
              +I+ +++  +   ++T   F  ++  S+SPD   IV    F + R  G  +++V   
Sbjct: 129 GGDNIWVMNVDGSDKRQVTKEEFRLLNQPSWSPDGRFIVAKKHFTTGRSLGTGEVWVYHV 188

Query: 334 NGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKF-------------SGEKFAIGVM 376
           +G       KR S+  +    +P+++  G  + +T+              +   F I   
Sbjct: 189 SGGGGVQLVKRASEALQKELGEPIYAADGKSVFYTRNVTPGPIFEYAQDSNTALFDIERY 248

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             +  +    V        PT SP G  + F R++   T SKLY  DL    E  I
Sbjct: 249 DLETGEVTTAVSGLGGSVRPTPSPDGGKIAFVRRE--RTKSKLYVKDLTSGEERKI 302



 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 59/325 (18%), Positives = 114/325 (35%), Gaps = 69/325 (21%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATY 231
           RI F S+          + VM+ DG++ R +T    ++L +P +SP+ + +     + T 
Sbjct: 120 RIAFTSDRAGGDN----IWVMNVDGSDKRQVTKEEFRLLNQPSWSPDGRFIVAKKHFTTG 175

Query: 232 DDEDILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRALISVQKDEAM----- 282
                  V++         + +       +  +  P ++++GK    +            
Sbjct: 176 RSLGTGEVWVYHVSGGGGVQLVKRASEALQKELGEPIYAADGKSVFYTRNVTPGPIFEYA 235

Query: 283 --------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                   DI   DL++       + L  ++  + SPD  +I F      K +LYV    
Sbjct: 236 QDSNTALFDIERYDLETGEVTTAVSGLGGSVRPTPSPDGGKIAFVRRERTKSKLYVKDLT 295

Query: 335 GSDQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEK-------------- 370
             ++++I          +      Y +  W+P G  + F  ++G K              
Sbjct: 296 SGEERKIYDALDQDVQETWAVTGVYPNMAWTPDGATVVF--WAGGKIRRVNVADGASSVI 353

Query: 371 -FAIG----VMKKDGSQERLLVEDSNLQAPTW---SPSGRSLIFSRKKDGDTGSKLYSID 422
            F I     V+     Q  +  +    + P W   SP G+S++F      +T  KL+   
Sbjct: 354 LFKIDDTRVVVDATHPQVEIAPDRFATKMPRWASVSPDGKSVVF------ETLGKLWIKP 407

Query: 423 LNGRNETLINTPAYASD----PQWV 443
            +G     + T    +     P W 
Sbjct: 408 ASGGEPRRLVTGGDEAAFELYPSWS 432



 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 108/334 (32%), Gaps = 58/334 (17%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGI--IKNSLCVMDRDGANIRYLTPSRDQILFE---- 216
           ++ +       + R +   +   +G       + V    G     L     + L +    
Sbjct: 151 FRLLNQPSWSPDGRFIVAKKHFTTGRSLGTGEVWVYHVSGGGGVQLVKRASEALQKELGE 210

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMD------------TRIDRAPKRIGNFRSMILAPR 264
           P ++ + + V Y        +  Y  D                     +      +  P 
Sbjct: 211 PIYAADGKSVFYTRNVTPGPIFEYAQDSNTALFDIERYDLETGEVTTAVSGLGGSVR-PT 269

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----------SASYSPDS 313
            S +G +     ++     +Y  DL S    ++ + L  ++           + +++PD 
Sbjct: 270 PSPDGGKIAFVRRERTKSKLYVKDLTSGEERKIYDALDQDVQETWAVTGVYPNMAWTPDG 329

Query: 314 SQIVFESD--------REGKEQLYVMQSNGS--------DQKRISQDKEASYFDPVW--- 354
           + +VF +          +G   + + + + +         Q  I+ D+ A+   P W   
Sbjct: 330 ATVVFWAGGKIRRVNVADGASSVILFKIDDTRVVVDATHPQVEIAPDRFATKM-PRWASV 388

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKK 410
           SP G  + F         + +    G + R LV   +  A    P+WS  GR+++F    
Sbjct: 389 SPDGKSVVFETLG----KLWIKPASGGEPRRLVTGGDEAAFELYPSWSRDGRTVVFVSWT 444

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           D   G         G  + +I  P +   P++  
Sbjct: 445 DAGLGRLRTVAASGGAAKDVIAQPGHYGAPRFSP 478



 Score = 93.5 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 86/264 (32%), Gaps = 29/264 (10%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRF---SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  D  + +            PR+   SP+ + V + T       ++++         + 
Sbjct: 362 VVVDATHPQVEIAPDRFATKMPRWASVSPDGKSVVFETLG-----KLWIKPASGGEPRRL 416

Query: 253 IGNFRSMILA--PRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASY 309
           +           P +S +G+  +     D     + +V     A + +        +  +
Sbjct: 417 VTGGDEAAFELYPSWSRDGRTVVFVSWTDAGLGRLRTVAASGGAAKDVIAQPGHYGAPRF 476

Query: 310 SPDSSQIVFESDREGK---------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           SPD   IVFE  R G            +Y +  +G    R+S+   +  F        D 
Sbjct: 477 SPDGKTIVFERRRGGGLTSSRWSQDPGVYRVAVSGGTPVRVSRGGSSPQFGAA----NDR 532

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TG 415
           +       +K  +      G  +R+      +     SP GR++ F +  +        G
Sbjct: 533 VFMLMSEKDKRQLVSTDLSGQAKRVHASGEMINDYQVSPDGRNVAFRQNYEAFVMPLMPG 592

Query: 416 SKLYSIDLNGRNETLINTPAYASD 439
           ++  ++D  G    +    A  +D
Sbjct: 593 TQEVAVDQKGGPLPVTRVSAEGAD 616



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 91/274 (33%), Gaps = 30/274 (10%)

Query: 158 ISDDIYQSITGEKGDFNSRI---LFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQ 212
           + D  +  +      F +++     VS    S + +    L +    G   R L    D+
Sbjct: 363 VVDATHPQVEIAPDRFATKMPRWASVSPDGKSVVFETLGKLWIKPASGGEPRRLVTGGDE 422

Query: 213 ILF--EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             F   P +S + + V + ++ D  + R+  +      A   I        APRFS +GK
Sbjct: 423 AAFELYPSWSRDGRTVVFVSWTDAGLGRLRTVAASGGAAKDVIAQ-PGHYGAPRFSPDGK 481

Query: 271 RALISVQKDEA---------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
             +   ++              +Y V +      R++       S  +   + ++     
Sbjct: 482 TIVFERRRGGGLTSSRWSQDPGVYRVAVSGGTPVRVSRGGS---SPQFGAANDRVFMLMS 538

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAI 373
            + K QL     +G   KR+    E    D   SP G  +AF +               +
Sbjct: 539 EKDKRQLVSTDLSG-QAKRVHASGEM-INDYQVSPDGRNVAFRQNYEAFVMPLMPGTQEV 596

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            V +K G      V         WS  G+ + +S
Sbjct: 597 AVDQKGGPLPVTRVSAEGADFINWSKDGKQVHWS 630



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 86/244 (35%), Gaps = 41/244 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--------------- 262
            ++P+   V +  +    I RV + D        +I + R ++ A               
Sbjct: 324 AWTPDGATVVF--WAGGKIRRVNVADGASSVILFKIDDTRVVVDATHPQVEIAPDRFATK 381

Query: 263 -PRF---SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQ 315
            PR+   S +GK  +          ++          RL          +  S+S D   
Sbjct: 382 MPRWASVSPDGKSVVFET----LGKLWIKPASGGEPRRLVTGGDEAAFELYPSWSRDGRT 437

Query: 316 IVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +VF S  + G  +L  + ++G   K +   +   Y  P +SP G  I F +  G      
Sbjct: 438 VVFVSWTDAGLGRLRTVAASGGAAKDVI-AQPGHYGAPRFSPDGKTIVFERRRGGGLTSS 496

Query: 375 VMKKDGSQERLLVEDSNL-------QAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              +D    R+ V             +P + + + R  +   +KD     +L S DL+G+
Sbjct: 497 RWSQDPGVYRVAVSGGTPVRVSRGGSSPQFGAANDRVFMLMSEKDKR---QLVSTDLSGQ 553

Query: 427 NETL 430
            + +
Sbjct: 554 AKRV 557



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/277 (11%), Positives = 84/277 (30%), Gaps = 38/277 (13%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            I  + G + +  +     +++  +   +  +   G     +         +PRFSP+ +
Sbjct: 61  RIAVDNGTWMNVDVSRDGKLIAFDLLGDIYTLPIAGGTPTRIAEGL-AYDQQPRFSPDGK 119

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD- 279
           ++A+ + D      +++M+       +       ++  P +S +G+  +     +  +  
Sbjct: 120 RIAFTS-DRAGGDNIWVMNVDGSDKRQVTKEEFRLLNQPSWSPDGRFIVAKKHFTTGRSL 178

Query: 280 EAMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFESDREGKE-------- 326
              +++   +      +L                Y+ D   + +  +             
Sbjct: 179 GTGEVWVYHVSGGGGVQLVKRASEALQKELGEPIYAADGKSVFYTRNVTPGPIFEYAQDS 238

Query: 327 -----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 +        +          S   P  SP G  IAF +    K  + V      
Sbjct: 239 NTALFDIERYDLETGEVTTAVSGLGGSVR-PTPSPDGGKIAFVRRERTKSKLYVKDLTSG 297

Query: 382 QERLLVE------------DSNLQAPTWSPSGRSLIF 406
           +ER + +                    W+P G +++F
Sbjct: 298 EERKIYDALDQDVQETWAVTGVYPNMAWTPDGATVVF 334


>gi|311069718|ref|YP_003974641.1| putative acylaminoacyl-peptidase [Bacillus atrophaeus 1942]
 gi|310870235|gb|ADP33710.1| putative acylaminoacyl-peptidase [Bacillus atrophaeus 1942]
          Length = 658

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 53/314 (16%), Positives = 104/314 (33%), Gaps = 68/314 (21%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLT-PSRDQILFEPRFSPNQQKVAYATYDDE 234
           R  FV   V       +  +M  D  +   +     ++   EPR+SP+ +++A+ +  + 
Sbjct: 27  RAAFVQTQVNKEKDSYTSHIMVYDTESGHSVPWTYGEKKNSEPRWSPDGRQLAFISDREG 86

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----------------- 277
           D  ++Y++ T      +++ +    +  P +S +G   L+SV                  
Sbjct: 87  DAPQLYILSTD-GGEARKLTDIPYGVSQPVWSPDGCSLLLSVNLAASEHVNDKEKAEHDN 145

Query: 278 -------------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                              K     I  V   +   ++LT     ++   +SPD   IVF
Sbjct: 146 NEPVEIHSLTYKKDGKGLIKGTYAQIILVSAVTGEIKQLTAHKADHLDPVFSPDGKSIVF 205

Query: 319 ES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----FS 367
            +      D      +Y+M  + SD  +I+      +    +SP G  IA         +
Sbjct: 206 TANLTDQDDASKPYDVYMMSLDSSDVTQITP-HRGFFGSCSFSPDGKYIALLGEEHEYQN 264

Query: 368 GEKFAIGVMKKDGSQERLLVE----------------DSNLQAPTWSPSGRSLIFSRKKD 411
                  +   +  +   L +                  + Q P W+   +       + 
Sbjct: 265 ATLTKAWLYHFESGRLTCLTDMLDVHLDDALIGDSLIGGSQQRPVWTKDSQGFYVIGTEQ 324

Query: 412 GDTGSKLYSIDLNG 425
           G TG  +Y I + G
Sbjct: 325 GSTG--IYYISIEG 336



 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 53/244 (21%), Positives = 92/244 (37%), Gaps = 58/244 (23%)

Query: 259 MILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +  P +S +GKRA     +           I   D +S  +   T     N    +SPD
Sbjct: 15  SVTDPHYSPDGKRAAFVQTQVNKEKDSYTSHIMVYDTESGHSVPWTYGEKKNSEPRWSPD 74

Query: 313 SSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------- 364
             Q+ F SDREG   QLY++ ++G + ++++ D       PVWSP G  +  +       
Sbjct: 75  GRQLAFISDREGDAPQLYILSTDGGEARKLT-DIPYGVSQPVWSPDGCSLLLSVNLAASE 133

Query: 365 ---------KFSGEKFAIG--VMKKDGSQE-------------------RLLVEDSNLQA 394
                      + E   I     KKDG                      +L    ++   
Sbjct: 134 HVNDKEKAEHDNNEPVEIHSLTYKKDGKGLIKGTYAQIILVSAVTGEIKQLTAHKADHLD 193

Query: 395 PTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLINTP--------AYASDPQW 442
           P +SP G+S++F+       D      +Y + L+  + T I TP        +++ D ++
Sbjct: 194 PVFSPDGKSIVFTANLTDQDDASKPYDVYMMSLDSSDVTQI-TPHRGFFGSCSFSPDGKY 252

Query: 443 VGFM 446
           +  +
Sbjct: 253 IALL 256



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 63/230 (27%), Gaps = 33/230 (14%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-----DDEDILRVY 240
            G     + V    G   +      D    +P FSP+ + + +        D      VY
Sbjct: 165 KGTYAQIILVSAVTGEIKQLTAHKADH--LDPVFSPDGKSIVFTANLTDQDDASKPYDVY 222

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEAMDIYSVDLQSNATE 295
           +M        + I   R    +  FS +GK   +       Q       +    +S    
Sbjct: 223 MMSLDSSDVTQ-ITPHRGFFGSCSFSPDGKYIALLGEEHEYQNATLTKAWLYHFESGRLT 281

Query: 296 RLTN---------------TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQK 339
            LT+                        ++ DS         +G   +Y +   G +   
Sbjct: 282 CLTDMLDVHLDDALIGDSLIGGSQQRPVWTKDSQGFYVIGTEQGSTGIYYISIEGLAYPI 341

Query: 340 RISQDKEASYFDPVWSPQGD-LIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           R+ ++   S+      P     IA          +  +     +E+ L  
Sbjct: 342 RLEKEHINSFTLH---PDEQSYIASIVKPTRPSELYSIPLGAGEEKRLTN 388


>gi|255013432|ref|ZP_05285558.1| putative peptidase/protease family protein [Bacteroides sp. 2_1_7]
          Length = 1071

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 61/337 (18%), Positives = 121/337 (35%), Gaps = 41/337 (12%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  ++D +  K              R    T        ++   G   +   F   +  S
Sbjct: 187 DIWMYDTQTGKH---TNLTDHAGEDRNAVFTPDGQTVYFLSERNGGSFNVYSFPLNTPQS 243

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                   V       +R+L+   DQ L    ++ + +   Y      +  +V +   R 
Sbjct: 244 IT-----AVTKFKTHPVRFLSTGSDQTLC---YTYDGE--IYTQRPGSNPQKVRIDLIRD 293

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D+      N      +   S +GK+   +++     +++      N T+++T+T      
Sbjct: 294 DQEQIADLNSSKGATSATVSPDGKQIAFTLRG----EVFVTSADYNTTKQITHTPAAETG 349

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPVWS 355
             +SPD+  + + S+R G  QLY+ +               +++ +   K      P +S
Sbjct: 350 ICFSPDNRTLAYASERGGNWQLYLAKIARKEEANFPNATIIEEEVLLPSKTVERNYPQFS 409

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFS 407
           P G  +AF +   ++  + V+  +  + R + + S   +       +WSP G+   L F 
Sbjct: 410 PDGKELAFIE---DRMRLMVVNLETKKVRQVTDGSTWYSTAGGFDYSWSPDGKWFTLRFI 466

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQWV 443
             K  D  S +  +   G   T +    Y S  PQWV
Sbjct: 467 GNKH-DPYSDIGLVSAQGGEITNLTNSGYTSTSPQWV 502



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 86/254 (33%), Gaps = 31/254 (12%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
             ++   S   K  + ++  D   I  L  S+         SP+ +++A+    +     
Sbjct: 274 IYTQRPGSNPQKVRIDLIRDDQEQIADLNSSKGATSA--TVSPDGKQIAFTLRGE----- 326

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
              + +      K+I +  +      FS + +    + ++     +Y   +         
Sbjct: 327 -VFVTSADYNTTKQITHTPAAETGICFSPDNRTLAYASERGGNWQLYLAKIARKEEANFP 385

Query: 299 NTLFINIS------------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           N   I                 +SPD  ++ F  DR    +L V+       ++++    
Sbjct: 386 NATIIEEEVLLPSKTVERNYPQFSPDGKELAFIEDR---MRLMVVNLETKKVRQVTDGST 442

Query: 347 ASY----FDPVWSPQGDL--IAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQ-APTWS 398
                  FD  WSP G    + F     + +  IG++   G +   L        +P W 
Sbjct: 443 WYSTAGGFDYSWSPDGKWFTLRFIGNKHDPYSDIGLVSAQGGEITNLTNSGYTSTSPQWV 502

Query: 399 PSGRSLIFSRKKDG 412
             G +++F+ ++ G
Sbjct: 503 LDGNAILFTTERYG 516



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 85/246 (34%), Gaps = 35/246 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S    P +S +GK+   +  +
Sbjct: 20  ISPDGTEIAFCY--KGDIYKV----PAKGGTATQLTTQASYECTPIWSPDGKQIAFASDR 73

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
           +   D++ +       + LT      I ++++PD   ++F +                 +
Sbjct: 74  NGNFDLFVMPSNGGTAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTE 133

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +   G   +++     A       S  G    +               S     I +
Sbjct: 134 LYKVPVGGGRTEQVL-GTPAEMVCFDKS--GKTFLYQDRKGFEDEWRKHHTSSVTRDIWM 190

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                 +   L +     +   ++P G+++ F  +++G +   +YS  LN   +++    
Sbjct: 191 YDTQTGKHTNLTDHAGEDRNAVFTPDGQTVYFLSERNGGS-FNVYSFPLN-TPQSITAVT 248

Query: 435 AYASDP 440
            + + P
Sbjct: 249 KFKTHP 254



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 70/201 (34%), Gaps = 28/201 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G       + D    IY V  +     +LT       +  +SPD  QI F SDR G 
Sbjct: 21  SPDGTEIAFCYKGD----IYKVPAKGGTATQLTTQASYECTPIWSPDGKQIAFASDRNGN 76

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFAIG 374
             L+VM SNG   + ++    AS     ++P G  + F+             +     + 
Sbjct: 77  FDLFVMPSNGGTAQCLTT-HSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTELY 135

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSIDL- 423
            +   G +   ++     +   +  SG++ ++  +K                 ++  D  
Sbjct: 136 KVPVGGGRTEQVLGTP-AEMVCFDKSGKTFLYQDRKGFEDEWRKHHTSSVTRDIWMYDTQ 194

Query: 424 NGRNETLINTPAYASDPQWVG 444
            G++  L +      +  +  
Sbjct: 195 TGKHTNLTDHAGEDRNAVFTP 215



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 102/260 (39%), Gaps = 41/260 (15%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-- 263
           L PS+      P+FSP+ +++A+     ED +R+ +++    +  +++ +  +       
Sbjct: 395 LLPSKTVERNYPQFSPDGKELAFI----EDRMRLMVVNLET-KKVRQVTDGSTWYSTAGG 449

Query: 264 ---RFSSNGKR--ALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               +S +GK         K D   DI  V  Q      LTN+ + + S  +  D + I+
Sbjct: 450 FDYSWSPDGKWFTLRFIGNKHDPYSDIGLVSAQGGEITNLTNSGYTSTSPQWVLDGNAIL 509

Query: 318 FESDREG-----------KEQLYVMQSNGSDQKRISQ---------DKEASYFDPVWSPQ 357
           F ++R G              L  M  +  D+ R+S+         +KE        +  
Sbjct: 510 FTTERYGMRAHASWGSLNDAMLVFMNQDAYDKFRLSKEDYELQKELEKEQKEVTGDKTGD 569

Query: 358 GDL--IAFTKFSGEKFAIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDG 412
                 A  K   +   I V++  G Q+R+L      S + +   S +G +L +      
Sbjct: 570 KKKEDKADGKKDEKPKDI-VVELKGIQDRILRLTPNSSEMGSAVISKNGETLYYFS--AF 626

Query: 413 DTGSKLYSIDLNGRNETLIN 432
           +    L+ +DL  +   L++
Sbjct: 627 EDKYDLWKMDLRKKETKLLH 646



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 73/217 (33%), Gaps = 32/217 (14%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +       
Sbjct: 31  YKGDIYKVPAKGGTATQLTTQAS-YECTPIWSPDGKQIAFASDRNGNFDLFVMPSN--GG 87

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-----------IYSVDLQSNATERL 297
             + +    +  +   F+ +GK  L S    +              +Y V +    TE++
Sbjct: 88  TAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTELYKVPVGGGRTEQV 147

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  +       ++ D
Sbjct: 148 LGTPAEMV--CFDKSGKTFLYQ-DRKGFEDEWRKHHTSSVTRDIWMYDTQTGKHTNLT-D 203

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDG 380
                 + V++P G  + F ++ +G  F +     + 
Sbjct: 204 HAGEDRNAVFTPDGQTVYFLSERNGGSFNVYSFPLNT 240



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
            SP G  IAF         I  +   G     L   ++ +  P WSP G+ + F+  ++G
Sbjct: 20  ISPDGTEIAFCYKGD----IYKVPAKGGTATQLTTQASYECTPIWSPDGKQIAFASDRNG 75

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +    L+ +  NG     + T + +  P 
Sbjct: 76  NF--DLFVMPSNGGTAQCLTTHSASEIPS 102


>gi|94971260|ref|YP_593308.1| transcriptional regulatory protein-like [Candidatus Koribacter
           versatilis Ellin345]
 gi|94553310|gb|ABF43234.1| transcriptional regulatory protein-like protein [Candidatus
           Koribacter versatilis Ellin345]
          Length = 469

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 70/169 (41%), Gaps = 5/169 (2%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                 P+FS +GKR      ++ A D++  +   +    LT TL    +  +SPD   I
Sbjct: 215 GGKNEGPQFSPDGKRLTFMSNRNGATDVWIANASGSDPHPLT-TLGDAGTPRWSPDGQTI 273

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            F+S       +  + ++G    R+    +++   P WS  G  I F      +F +  +
Sbjct: 274 AFDSHIHKYSAILTIPADGG-APRVLIAGDSNNSVPSWSKDGHFIYFASDRTGRFEVWRV 332

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              G   + + +D    AP  S  G+ L +++ +      +++ + L G
Sbjct: 333 PTTGGPAQQITQDGGF-APVESADGKLLFYAKNQ--FPNPEVWEVSLEG 378



 Score =  122 bits (307), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 87/230 (37%), Gaps = 11/230 (4%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P+FSP+ +++ + +  + +      +       P  +         PR+S +G+      
Sbjct: 221 PQFSPDGKRLTFMS--NRNGATDVWIANASGSDPHPLTTL-GDAGTPRWSPDGQTIAFDS 277

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              +   I ++     A   L      N   S+S D   I F SDR G+ +++ + + G 
Sbjct: 278 HIHKYSAILTIPADGGAPRVLIAGDSNNSVPSWSKDGHFIYFASDRTGRFEVWRVPTTGG 337

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
             ++I+QD     F PV S  G L+ + K       +  +  +G      +      +  
Sbjct: 338 PAQQITQDGG---FAPVESADGKLLFYAKNQFPNPEVWEVSLEGGGVEAPLRPIIRPVTW 394

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            TW+ +G S+ +  +  G+    L  ++   R    +        P W+ 
Sbjct: 395 ATWAVAGDSVFYVEEGPGNIAM-LSVVEPKARRMRQVTVLG--RFPFWLA 441



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 7/149 (4%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           ++      +T     N    +SPD  ++ F S+R G   +++  ++GSD   ++   +A 
Sbjct: 205 VKGVQVTLVTGGK--NEGPQFSPDGKRLTFMSNRNGATDVWIANASGSDPHPLTTLGDA- 261

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS 407
              P WSP G  IAF     +  AI  +  DG   R+L   DSN   P+WS  G  + F+
Sbjct: 262 -GTPRWSPDGQTIAFDSHIHKYSAILTIPADGGAPRVLIAGDSNNSVPSWSKDGHFIYFA 320

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             + G    +++ +   G     I     
Sbjct: 321 SDRTGRF--EVWRVPTTGGPAQQITQDGG 347



 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 75/240 (31%), Gaps = 55/240 (22%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+ F+S    +      + + +  G++   LT   D     PR+SP+ Q +A+ ++  + 
Sbjct: 229 RLTFMSNRNGA----TDVWIANASGSDPHPLTTLGD--AGTPRWSPDGQTIAFDSHIHK- 281

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                L       AP+ +    S    P +S +G     +  +    +++ V       +
Sbjct: 282 -YSAILTIPADGGAPRVLIAGDSNNSVPSWSKDGHFIYFASDRTGRFEVWRVPTTGGPAQ 340

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--------KRISQ---- 343
           ++T       +   S D   + +  ++    +++ +   G           + ++     
Sbjct: 341 QITQDGGF--APVESADGKLLFYAKNQFPNPEVWEVSLEGGGVEAPLRPIIRPVTWATWA 398

Query: 344 ----------DKEASY-----------------------FDPVWSPQGDLIAFTKFSGEK 370
                     +   +                        F    SP G  +AF +   E 
Sbjct: 399 VAGDSVFYVEEGPGNIAMLSVVEPKARRMRQVTVLGRFPFWLAISPDGRKLAFDRTDSES 458



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 3/105 (2%)

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           +++         P +SP G  + F         + +    GS    L    +   P WSP
Sbjct: 209 QVTLVTGGKNEGPQFSPDGKRLTFMSNRNGATDVWIANASGSDPHPLTTLGDAGTPRWSP 268

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWV 443
            G+++ F         S + +I  +G     LI   +  S P W 
Sbjct: 269 DGQTIAFDSHIH--KYSAILTIPADGGAPRVLIAGDSNNSVPSWS 311



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             +  LV     + P +SP G+ L F   ++G T   ++  + +G +   + T   A  P
Sbjct: 207 GVQVTLVTGGKNEGPQFSPDGKRLTFMSNRNGAT--DVWIANASGSDPHPLTTLGDAGTP 264

Query: 441 QWVG 444
           +W  
Sbjct: 265 RWSP 268


>gi|284030771|ref|YP_003380702.1| WD40 domain-containing protein beta Propeller [Kribbella flavida
           DSM 17836]
 gi|283810064|gb|ADB31903.1| WD40 domain protein beta Propeller [Kribbella flavida DSM 17836]
          Length = 1043

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 91/233 (39%), Gaps = 16/233 (6%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +   F    SP  +++A+      D++    +      + +R+ +       PR+S +G+
Sbjct: 60  EGTNFMVAVSPEGRRLAF------DLVTAIWVTPATGGSAQRLTDDLQDATRPRWSPDGR 113

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--EQL 328
           R +    +D    ++++     +  +LT     +    ++PD   IVF SDR G     +
Sbjct: 114 RLVFQSYRDGNFHLWTIQPDGRSLRQLTTGRHDHREPHFTPDGRSIVFSSDRGGNGSYGI 173

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
           + +  +      +++D  A   +PV SP G  IAFT  +     +          R +V 
Sbjct: 174 HRLDLSTGAIVALTED-PAEEAEPVVSPDGRRIAFTVDTAAIVEL---DLATGVRRTVVA 229

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                 +  P +SPSG+ L   R         +    +    +     P++AS
Sbjct: 230 AQTGITVFGPAYSPSGQ-LAHVRLSGPACDLVIGDAKVTSGQDVFAVPPSWAS 281



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/329 (18%), Positives = 116/329 (35%), Gaps = 41/329 (12%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           + D K   G+  F+ P SW            + +    G  +  + F +   V+      
Sbjct: 261 IGDAKVTSGQDVFAVPPSWASATELFYTADGRVMKHRVGGGSEPVPFTAVVPVTSRRPRP 320

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
             V D + +  R +       +  P  SP+ + +++   +      ++L  T     P++
Sbjct: 321 -KVPDVESSRSRPVKG-----IASPTVSPDGRWLSFRALNA-----LWLAPTDGRARPRK 369

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I         P FS +G+  L +  +D   D++  DL +    ++++      +  +SPD
Sbjct: 370 IVADGYFNSDPDFSPDGRSLLYASDRDGTADLWLHDLANGTDTKVSSLPGAQTAPRFSPD 429

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------- 365
             Q+ ++ D++G    +++       ++++           WSP G  I           
Sbjct: 430 GRQVAYQ-DQDG--IAWMLDLGSGQVRQLTPTLFQP-GRVSWSPDGRTIVLAAVKPFTKR 485

Query: 366 -FSGEKFAIGVMKKDGSQE-------RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              G    + V     S E       R L    +   P +SP GR L F         S 
Sbjct: 486 FREGTSQLLYVDVASTSFEYVEPMPFRSLATRGDD-GPVFSPDGRWLAFV------VESL 538

Query: 418 LYSIDLNGRNE---TLINTPAYASD-PQW 442
           LY + ++ R           +  +D P W
Sbjct: 539 LYVVPVDQRGRFTGRPRAVTSEVTDSPVW 567



 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 97/278 (34%), Gaps = 46/278 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDD----------EDILRVYLMDTRIDRAPKRIGN 255
           +T  +D     P ++ +  ++ Y               E +    ++     R   ++ +
Sbjct: 266 VTSGQDVFAVPPSWA-SATELFYTADGRVMKHRVGGGSEPVPFTAVVPVTSRRPRPKVPD 324

Query: 256 FRSM-------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISA 307
             S        I +P  S +G+             ++       A   ++    + N   
Sbjct: 325 VESSRSRPVKGIASPTVSPDGRWLSFRA----LNALWLAPTDGRARPRKIVADGYFNSDP 380

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD   +++ SDR+G   L++         ++S     +   P +SP G  +A+    
Sbjct: 381 DFSPDGRSLLYASDRDGTADLWLHDLANGTDTKVSSL-PGAQTAPRFSPDGRQVAYQDQD 439

Query: 368 GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFS-----RKKDGDTGSKLYSI 421
           G      ++     Q R L          +WSP GR+++ +      K+  +  S+L  +
Sbjct: 440 G---IAWMLDLGSGQVRQLTPTLFQPGRVSWSPDGRTIVLAAVKPFTKRFREGTSQLLYV 496

Query: 422 DLNGRN-------------ETLINTPAYASDPQWVGFM 446
           D+   +                 + P ++ D +W+ F+
Sbjct: 497 DVASTSFEYVEPMPFRSLATRGDDGPVFSPDGRWLAFV 534



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 60/349 (17%), Positives = 114/349 (32%), Gaps = 72/349 (20%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           A  ++DD+  +          R++F S    +      L  +  DG ++R LT  R    
Sbjct: 93  AQRLTDDLQDATRPRWSPDGRRLVFQSYRDGN----FHLWTIQPDGRSLRQLTTGRHD-H 147

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            EP F+P+ + + +++    +             A   +    +    P  S +G+R   
Sbjct: 148 REPHFTPDGRSIVFSSDRGGNGSYGIHRLDLSTGAIVALTEDPAEEAEPVVSPDGRRIAF 207

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNT-LFINI-SASYSPDSS------------------ 314
           +V   +   I  +DL +     +      I +   +YSP                     
Sbjct: 208 TV---DTAAIVELDLATGVRRTVVAAQTGITVFGPAYSPSGQLAHVRLSGPACDLVIGDA 264

Query: 315 -----QIVFE---SDREGKEQLYVMQ--------SNGSDQKRISQDKEASYF-------- 350
                Q VF    S     E  Y             GS+    +     +          
Sbjct: 265 KVTSGQDVFAVPPSWASATELFYTADGRVMKHRVGGGSEPVPFTAVVPVTSRRPRPKVPD 324

Query: 351 -------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAP 395
                         P  SP G  ++F   +    A+ +   DG     +++ +      P
Sbjct: 325 VESSRSRPVKGIASPTVSPDGRWLSFRALN----ALWLAPTDGRARPRKIVADGYFNSDP 380

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            +SP GRSL+++  +DG     L+ +  NG +  + + P   + P++  
Sbjct: 381 DFSPDGRSLLYASDRDGTADLWLHDL-ANGTDTKVSSLPGAQTAPRFSP 428


>gi|170574759|ref|XP_001892951.1| WD40-like Beta Propeller Repeat family protein [Brugia malayi]
 gi|158601263|gb|EDP38222.1| WD40-like Beta Propeller Repeat family protein [Brugia malayi]
          Length = 693

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 60/344 (17%), Positives = 109/344 (31%), Gaps = 89/344 (25%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F   ++F      +    +S+  +   G N                FS +   + +    
Sbjct: 11  FAETVIFAELHFSAERHLSSIRQLTFGGQNAEG------------YFSFDGNWLTFQAAG 58

Query: 233 DE-------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                     I ++ L      + P+RI +         F  + +  + +     A    
Sbjct: 59  ISEYGTSCDQIYKLDLTAPPEKQIPQRISSGIGACTCSYFYPDNRHMIYAGTFQHANFTP 118

Query: 286 SVDLQ------------------------------------------SNATERLTNTLFI 303
           SV+++                                               RLTNT   
Sbjct: 119 SVNIESCPTKTCQTQRAKTDPHLKHLCNTSYTWDLFPEYDIFKVNEFGTVITRLTNTAGY 178

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +   + SPD  +IVF S R G  ++++M S+G++ ++++ D+      P +SP G  I F
Sbjct: 179 DAEGAVSPDGRKIVFTSLRSGDPEIWIMNSDGTEPEQLT-DELGYDGGPFFSPDGSKIVF 237

Query: 364 TKFSGE--------------------KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGR 402
                                     +  +  +  DGS  + +     +  AP + P  R
Sbjct: 238 RASRPNTTERIQTYKDLLSYNLVSPLEMELYTINVDGSGLKKVTSLGGSNWAPFYMPDNR 297

Query: 403 SLIFSRK---KDGDTGS-KLYSIDLNGRNETLI--NTPAYASDP 440
            +IFS       G  G+  LY ID  G +   I  N   + + P
Sbjct: 298 HIIFSSNFNETGGHFGAFNLYMIDEAGGDVERITFNEGGFDAFP 341



 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 87/221 (39%), Gaps = 33/221 (14%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             +  + + DI +V    T I     R+ N          S +G++ + +  +    +I+
Sbjct: 149 YTWDLFPEYDIFKVNEFGTVI----TRLTNTAGYDAEGAVSPDGRKIVFTSLRSGDPEIW 204

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-------------------- 325
            ++      E+LT+ L  +    +SPD S+IVF + R                       
Sbjct: 205 IMNSDGTEPEQLTDELGYDGGPFFSPDGSKIVFRASRPNTTERIQTYKDLLSYNLVSPLE 264

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKD 379
            +LY +  +GS  K+++    +++  P + P    I F+            F + ++ + 
Sbjct: 265 MELYTINVDGSGLKKVTSLGGSNW-APFYMPDNRHIIFSSNFNETGGHFGAFNLYMIDEA 323

Query: 380 GSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           G     +   E      P +  +GR L++S  ++G + S+L
Sbjct: 324 GGDVERITFNEGGFDAFPMFDRTGRRLVWSSSRNGRSRSEL 364



 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 65/166 (39%), Gaps = 24/166 (14%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++  V+   N   RLTNT   +  AS S D   I+F S R G   L++M  +G + K+I
Sbjct: 524 FELIKVNKYGNFIRRLTNTSGYDGEASISSDGKHIIFTSRRNGDPNLWIMDIDGKNAKQI 583

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKF---------------------AIGVMKKDG 380
           ++           S  G  I F                              I +M  DG
Sbjct: 584 TK-TIGYEGGAKLSSDGRFIVFHASRPTSPSQLFKYGWLLRRYNAVELADTQIFLMHSDG 642

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNG 425
           S  R L ++     PT+  + + ++F+      +    +++++++G
Sbjct: 643 SGLRQLTKNGTNLWPTFL-NNKRILFASSGILENDAFNIFAVNIDG 687



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 81/200 (40%), Gaps = 29/200 (14%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  +  ++  G  I  LT +      E   SP+ +K+ + +    D   +++M++     
Sbjct: 156 EYDIFKVNEFGTVITRLTNT-AGYDAEGAVSPDGRKIVFTSLRSGDP-EIWIMNSD-GTE 212

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAM--------------------DIYSVDL 289
           P+++ +       P FS +G + +    +                        ++Y++++
Sbjct: 213 PEQLTDELGYDGGPFFSPDGSKIVFRASRPNTTERIQTYKDLLSYNLVSPLEMELYTINV 272

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQ 343
             +  +++T+    N +  Y PD+  I+F S+        G   LY++   G D +RI+ 
Sbjct: 273 DGSGLKKVTSLGGSNWAPFYMPDNRHIIFSSNFNETGGHFGAFNLYMIDEAGGDVERITF 332

Query: 344 DKEASYFDPVWSPQGDLIAF 363
           ++      P++   G  + +
Sbjct: 333 NEGGFDAFPMFDRTGRRLVW 352



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 62/165 (37%), Gaps = 27/165 (16%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +     +R+ N          SS+GK  + + +++   +++ +D+     +++T T+   
Sbjct: 531 KYGNFIRRLTNTSGYDGEASISSDGKHIIFTSRRNGDPNLWIMDIDGKNAKQITKTIGYE 590

Query: 305 ISASYSPDSSQIVFESDREGKE---------------------QLYVMQSNGSDQKRISQ 343
             A  S D   IVF + R                         Q+++M S+GS  +++++
Sbjct: 591 GGAKLSSDGRFIVFHASRPTSPSQLFKYGWLLRRYNAVELADTQIFLMHSDGSGLRQLTK 650

Query: 344 DKEASYFDPVWSPQGDLIAFTK---FSGEKFAIGVMKKDGSQERL 385
           +    +   +       I F        + F I  +  DGS+   
Sbjct: 651 NGTNLWPTFL---NNKRILFASSGILENDAFNIFAVNIDGSELEQ 692



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/360 (12%), Positives = 103/360 (28%), Gaps = 98/360 (27%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE------- 234
                     +L ++D  G ++  +T +       P F    +++ +++  +        
Sbjct: 306 NETGGHFGAFNLYMIDEAGGDVERITFNEGGFDAFPMFDRTGRRLVWSSSRNGRSRSELN 365

Query: 235 ----DILRVYLMDTRIDRAPKRIGNF--------------------RSMILAPRFSSNGK 270
               D L    M+   +   + + +                       + +A  FS + K
Sbjct: 366 LFIADWLDNGTMNIANEMKEENLTSSNLLSIMMKKNYPKKIEQLTNDDINMAGSFSFDDK 425

Query: 271 RALISVQKDEAMDI---YSVDLQSNATER----LTNTLFINISASYSPDSSQIVFESD-- 321
           R +         D       DL  +++ R    L+  + I  S SY  D + I++ S+  
Sbjct: 426 RVIYEGYGTHLYDAACEQIFDLDXSSSSRRIRRLSTGIGITRSPSYISDDNIIIYASNIL 485

Query: 322 ----------------------------REGKEQLY------VMQSNGSDQKRISQDKEA 347
                                       R    +LY       +   G+  +R++ +   
Sbjct: 486 TANRSILNSCPRRVCATARKSWIKEICKRSHVLELYPDFELIKVNKYGNFIRRLT-NTSG 544

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIF 406
              +   S  G  I FT        + +M  DG   + + +          S  GR ++F
Sbjct: 545 YDGEASISSDGKHIIFTSRRNGDPNLWIMDIDGKNAKQITKTIGYEGGAKLSSDGRFIVF 604

Query: 407 SRKKDGDTG-------------------SKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
              +                        ++++ +  +G     +        P    F++
Sbjct: 605 HASRPTSPSQLFKYGWLLRRYNAVELADTQIFLMHSDGSGLRQLTKNGTNLWPT---FLN 661



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 75/235 (31%), Gaps = 26/235 (11%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM--- 282
           + +  + +  I            +  R   F        FS +G                
Sbjct: 6   IFFFLFAETVIFAELHFSAERHLSSIRQLTFGGQNAEGYFSFDGNWLTFQAAGISEYGTS 65

Query: 283 --DIYSVDL----QSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVM 331
              IY +DL    +    +R+++ +     + + PD+  +++    +         +   
Sbjct: 66  CDQIYKLDLTAPPEKQIPQRISSGIGACTCSYFYPDNRHMIYAGTFQHANFTPSVNIESC 125

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            +     +R   D    +             +T     ++ I  + + G+    L   + 
Sbjct: 126 PTKTCQTQRAKTDPHLKHLCNTS--------YTWDLFPEYDIFKVNEFGTVITRLTNTAG 177

Query: 392 LQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
             A    SP GR ++F+  + GD   +++ ++ +G   E L +   Y   P +  
Sbjct: 178 YDAEGAVSPDGRKIVFTSLRSGD--PEIWIMNSDGTEPEQLTDELGYDGGPFFSP 230



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/168 (11%), Positives = 55/168 (32%), Gaps = 35/168 (20%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I+F S           L +MD DG N + +T +        + S + + + +       
Sbjct: 557 HIIFTSRRNGDPN----LWIMDIDGKNAKQITKT-IGYEGGAKLSSDGRFIVFHASRPTS 611

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             +++     +                       +   + +       I+ +    +   
Sbjct: 612 PSQLFKYGWLLR----------------------RYNAVELA---DTQIFLMHSDGSGLR 646

Query: 296 RLTNTLFINISASYSPDSSQIVFESD---REGKEQLYVMQSNGSDQKR 340
           +LT     N+  ++  ++ +I+F S          ++ +  +GS+ ++
Sbjct: 647 QLTKN-GTNLWPTFL-NNKRILFASSGILENDAFNIFAVNIDGSELEQ 692


>gi|262381631|ref|ZP_06074769.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262296808|gb|EEY84738.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 1080

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 62/337 (18%), Positives = 122/337 (36%), Gaps = 41/337 (12%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  ++D +  K              R    T        ++   G   +   F   +  S
Sbjct: 196 DIWMYDTQTGKH---TNLTDHAGEDRNAVFTPDGQTVYFLSERNGGSFNVYSFPLNTPQS 252

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                   V       +R+L+   DQ L    ++ + +   Y      +  +V +   R 
Sbjct: 253 IT-----AVTKFKTHPVRFLSTGSDQTLC---YTYDGE--IYTQRPGSNPQKVRIDLIRD 302

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D+      N      +   S +GK+  ++++     +++      N T+++TNT      
Sbjct: 303 DQEQISDLNSSKGATSATVSPDGKQIALTLRG----EVFVTSADYNTTKQITNTPAAETG 358

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPVWS 355
             +SPD+  + + S+R G  QLY+ +               +++ +   K      P +S
Sbjct: 359 VCFSPDNRTLAYASERGGNWQLYLAKIARKEEANFPNATIIEEEVLLPSKTVERNYPQFS 418

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFS 407
           P G  +AF +   ++  + V+  +  + R + + S   +       +WSP G+   L F 
Sbjct: 419 PDGKELAFIE---DRMRLMVVNLETKKVRQVTDGSTWYSTAGGFDYSWSPDGKWFTLRFI 475

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQWV 443
             K  D  S +  +   G   T +    Y S  PQWV
Sbjct: 476 GNKH-DPYSDIGLVSAQGGEITNLTNSGYTSISPQWV 511



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 74/215 (34%), Gaps = 34/215 (15%)

Query: 258 SMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           S  + P +      S +G       + D    IY V  +     +LT       +  +SP
Sbjct: 16  SYAVTPLWMRDVQISPDGTEIAFCYKGD----IYKVPAKGGTATQLTTQASYECTPIWSP 71

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
           D  QI F SDR G   L+VM SNG   + ++    AS     ++P G  + F+       
Sbjct: 72  DGKQIAFASDRNGNFDLFVMPSNGGTAQCLTT-HSASEIPSAFTPDGKYVLFSASIQDPA 130

Query: 367 ------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--------- 411
                 +     +  +   G +   ++     +   +  SG++ ++  +K          
Sbjct: 131 QSALFPTSAMTELYKVPIGGGRTEQVLGTP-AEMVCFDKSGKTFLYQDRKGFEDEWRKHH 189

Query: 412 -GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                  ++  D   G++  L +      +  +  
Sbjct: 190 TSSVTRDIWMYDTQTGKHTNLTDHAGEDRNAVFTP 224



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 85/246 (34%), Gaps = 35/246 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S    P +S +GK+   +  +
Sbjct: 29  ISPDGTEIAFCY--KGDIYKV----PAKGGTATQLTTQASYECTPIWSPDGKQIAFASDR 82

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
           +   D++ +       + LT      I ++++PD   ++F +                 +
Sbjct: 83  NGNFDLFVMPSNGGTAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTE 142

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +   G   +++     A       S  G    +               S     I +
Sbjct: 143 LYKVPIGGGRTEQVL-GTPAEMVCFDKS--GKTFLYQDRKGFEDEWRKHHTSSVTRDIWM 199

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                 +   L +     +   ++P G+++ F  +++G +   +YS  LN   +++    
Sbjct: 200 YDTQTGKHTNLTDHAGEDRNAVFTPDGQTVYFLSERNGGS-FNVYSFPLN-TPQSITAVT 257

Query: 435 AYASDP 440
            + + P
Sbjct: 258 KFKTHP 263



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 55/352 (15%), Positives = 123/352 (34%), Gaps = 48/352 (13%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK   L +   ++ V        K+  ++PA+   +  +  +      +   G+
Sbjct: 319 ATVSPDGKQIALTLRGEVF-VTSADYNTTKQITNTPAAETGVCFSPDNRTLAYASERGGN 377

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +   +  ++    +     ++            L PS+      P+FSP+ +++A+    
Sbjct: 378 WQLYLAKIARKEEANFPNATII-------EEEVLLPSKTVERNYPQFSPDGKELAFI--- 427

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----RFSSNGKR--ALISVQK-DEAMDI 284
            ED +R+ +++    +  +++ +  +           +S +GK         K D   DI
Sbjct: 428 -EDRMRLMVVNLET-KKVRQVTDGSTWYSTAGGFDYSWSPDGKWFTLRFIGNKHDPYSDI 485

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-----------KEQLYVMQS 333
             V  Q      LTN+ + +IS  +  D + I+F ++R G              L  M  
Sbjct: 486 GLVSAQGGEITNLTNSGYTSISPQWVLDGNAILFTTERYGMRAHASWGSLNDAMLVFMNQ 545

Query: 334 NGSDQKRISQDKE-------------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +  D+ R+S++               A         +           +   + +     
Sbjct: 546 DAYDKFRLSKEDYELQKELEKEQKEVAGDKTDDKKKEDKADEKKDEKPKDIVVELKGIQD 605

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              RL    S + +   S +G +L +      +    L+ +DL  +   L++
Sbjct: 606 RILRLTPNSSEMGSAVISKNGETLYYFS--AFEDKYDLWKMDLRKKETKLLH 655



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 73/217 (33%), Gaps = 32/217 (14%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +       
Sbjct: 40  YKGDIYKVPAKGGTATQLTTQAS-YECTPIWSPDGKQIAFASDRNGNFDLFVMPSN--GG 96

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-----------IYSVDLQSNATERL 297
             + +    +  +   F+ +GK  L S    +              +Y V +    TE++
Sbjct: 97  TAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTELYKVPIGGGRTEQV 156

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  +       ++ D
Sbjct: 157 LGTPAEMV--CFDKSGKTFLYQ-DRKGFEDEWRKHHTSSVTRDIWMYDTQTGKHTNLT-D 212

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDG 380
                 + V++P G  + F ++ +G  F +     + 
Sbjct: 213 HAGEDRNAVFTPDGQTVYFLSERNGGSFNVYSFPLNT 249


>gi|162452827|ref|YP_001615194.1| protein kinase [Sorangium cellulosum 'So ce 56']
 gi|161163409|emb|CAN94714.1| Protein kinase [Sorangium cellulosum 'So ce 56']
          Length = 1529

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 54/248 (21%), Positives = 96/248 (38%), Gaps = 16/248 (6%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            V+     ++ V   DG     +    +  +    FSP+ Q++A A++D      V +   
Sbjct: 942  VTASWDGTVRVWKADGTGEPLVLRDHEGRVNSAAFSPDGQRIASASHDR----TVRVWKA 997

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 P  +    + + A  FS +GKR   +   D    ++S D  S     L       
Sbjct: 998  DGTGEPLVLRGHDAPVYAVAFSPDGKRIA-TGSYDHTARVWSAD-GSGEPVVLRGHEHEV 1055

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               ++SPD  Q+V  S     +   V ++NG+ +  + +  EA  +   +SP G  I   
Sbjct: 1056 QGVAFSPDGQQLVTASS---DKTARVWKANGTGEPLVLRGHEAPVYSAAFSPDGRRIVTG 1112

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                      V K DG+ E L++          +SP G+ +  +     DT  +++S D 
Sbjct: 1113 SRDKTA---RVWKADGTGEPLVLRGHQDAVWAAFSPDGKRIATASY---DTTVRVWSADG 1166

Query: 424  NGRNETLI 431
             G    L+
Sbjct: 1167 TGEPLVLL 1174



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 98/280 (35%), Gaps = 17/280 (6%)

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            +T   G   +      + VV+  +  +  V   D      +    +  +    FSP+ + 
Sbjct: 881  LTHPGGVMGASYSPDGKYVVTASLDRNARVWKADMTGEPLVLRGHENGVSSAAFSPDGRW 940

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +  A++D      V +        P  + +    + +  FS +G+R   S   D  + ++
Sbjct: 941  IVTASWDG----TVRVWKADGTGEPLVLRDHEGRVNSAAFSPDGQRIA-SASHDRTVRVW 995

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
              D  +     L        + ++SPD  +I   S         V  ++GS +  + +  
Sbjct: 996  KAD-GTGEPLVLRGHDAPVYAVAFSPDGKRIATGSY---DHTARVWSADGSGEPVVLRGH 1051

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            E       +SP G  +  T  S +   +      G    L   ++ + +  +SP GR ++
Sbjct: 1052 EHEVQGVAFSPDGQQLV-TASSDKTARVWKANGTGEPLVLRGHEAPVYSAAFSPDGRRIV 1110

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
               +   D  ++++  D  G    L        D  W  F
Sbjct: 1111 TGSR---DKTARVWKADGTGEPLVL----RGHQDAVWAAF 1143



 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 95/249 (38%), Gaps = 14/249 (5%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + + S     ++ V   DG     +    D  ++   FSP+ +++A  +YD        +
Sbjct: 981  QRIASASHDRTVRVWKADGTGEPLVLRGHDAPVYAVAFSPDGKRIATGSYDH----TARV 1036

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                    P  +      +    FS +G++ + +   D+   ++  +  +     L    
Sbjct: 1037 WSADGSGEPVVLRGHEHEVQGVAFSPDGQQLV-TASSDKTARVWKAN-GTGEPLVLRGHE 1094

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                SA++SPD  +IV    R+   +++   ++G+ +  + +  + + +   +SP G  I
Sbjct: 1095 APVYSAAFSPDGRRIV-TGSRDKTARVWK--ADGTGEPLVLRGHQDAVWA-AFSPDGKRI 1150

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            A   +      +      G    LL +   + +  +S  G  ++       D  +++++ 
Sbjct: 1151 ATASYD-TTVRVWSADGTGEPLVLLRDHEPIASVAFSHDGGHIV---TAPEDRTARVWNA 1206

Query: 422  DLNGRNETL 430
            D  G    L
Sbjct: 1207 DGTGHPVVL 1215



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 92/230 (40%), Gaps = 14/230 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + +V+     +  V + DG     +    +  +    FSP+ + V  A++D        +
Sbjct: 1232 KRIVTASWDRTARVWNADGKGEPLILRGHEAQVCSAAFSPDGEHVVTASWDR----TARV 1287

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +      P  +    + + +  FS +GKR + +V  D+ + +++ D +      L    
Sbjct: 1288 WNADGTGDPVVLRGHEAQLYSAAFSPDGKRIV-TVSFDKTVRVWNADGEGEPLI-LRGHE 1345

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +    ++SPD  +I   S     +   + +++G+    + +  E       +SP G  +
Sbjct: 1346 DVVYWVAFSPDGERIATAS---WDKTARLWKADGAGDPVVLRGHEHWVLGVAFSPDGKRV 1402

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRK 409
                  G    + V   DG+ E L++  S   + +  +SP G+ ++ +  
Sbjct: 1403 VTGSQDGT---VRVWNADGTGEPLVLRGSESPVNSVAFSPDGKRILSASD 1449



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 91/259 (35%), Gaps = 19/259 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + + +     ++ V   DG     +     + +    FS +   +  A  D        +
Sbjct: 1148 KRIATASYDTTVRVWSADGTGEPLVLLRDHEPIASVAFSHDGGHIVTAPEDR----TARV 1203

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +      P  +   R ++ +  FS + KR + +   D    +++ D +      L    
Sbjct: 1204 WNADGTGHPVVLRGHRDVVHSVAFSPDDKRIV-TASWDRTARVWNADGKGEPLI-LRGHE 1261

Query: 302  FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                SA++SPD   +V  S DR  +    V  ++G+    + +  EA  +   +SP G  
Sbjct: 1262 AQVCSAAFSPDGEHVVTASWDRTAR----VWNADGTGDPVVLRGHEAQLYSAAFSPDGKR 1317

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKL 418
            I    F      + V   DG  E L++           +SP G  +  +     D  ++L
Sbjct: 1318 IVTVSFDKT---VRVWNADGEGEPLILRGHEDVVYWVAFSPDGERIATASW---DKTARL 1371

Query: 419  YSIDLNGRNETLINTPAYA 437
            +  D  G    L     + 
Sbjct: 1372 WKADGAGDPVVLRGHEHWV 1390



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 80/216 (37%), Gaps = 15/216 (6%)

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D      V           + +      ++   +S +GK  +++   D    ++  D+ +
Sbjct: 859  DVPRGWAVVARGALHSWVARAVLTHPGGVMGASYSPDGKY-VVTASLDRNARVWKADM-T 916

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                 L        SA++SPD   IV  +  +G  +++   ++G+ +  + +D E     
Sbjct: 917  GEPLVLRGHENGVSSAAFSPDGRWIV-TASWDGTVRVWK--ADGTGEPLVLRDHEGRVNS 973

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +SP G  IA          +      G    L   D+ + A  +SP G+ +       
Sbjct: 974  AAFSPDGQRIASASHD-RTVRVWKADGTGEPLVLRGHDAPVYAVAFSPDGKRIATGSY-- 1030

Query: 412  GDTGSKLYSIDLNGRNETL------INTPAYASDPQ 441
             D  ++++S D +G    L      +   A++ D Q
Sbjct: 1031 -DHTARVWSADGSGEPVVLRGHEHEVQGVAFSPDGQ 1065



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 11/65 (16%), Positives = 31/65 (47%), Gaps = 9/65 (13%)

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYAS 438
           +L     +   ++SP G+ ++ +     D  ++++  D+ G    L      +++ A++ 
Sbjct: 880 VLTHPGGVMGASYSPDGKYVVTASL---DRNARVWKADMTGEPLVLRGHENGVSSAAFSP 936

Query: 439 DPQWV 443
           D +W+
Sbjct: 937 DGRWI 941



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 29/71 (40%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + VV+G    ++ V + DG     +    +  +    FSP+ +++  A+ D    +   L
Sbjct: 1400 KRVVTGSQDGTVRVWNADGTGEPLVLRGSESPVNSVAFSPDGKRILSASDDRAVRVWTDL 1459

Query: 242  MDTRIDRAPKR 252
               R    PK 
Sbjct: 1460 EPLRGVDDPKL 1470


>gi|298241759|ref|ZP_06965566.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297554813|gb|EFH88677.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 808

 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/298 (19%), Positives = 107/298 (35%), Gaps = 67/298 (22%)

Query: 212 QILFEPRFSPNQQKVAYA-------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +++ EP+ SP+ +++A++       T      + +        ++P ++ +      APR
Sbjct: 171 RVVGEPQISPDGKRIAFSVLQCDTETNSTSSAIWIVESRGGKTQSPWQVSSGTQHDYAPR 230

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---- 320
           +S +G+       ++    IY + L+     +L+N        S+ PD + ++  S    
Sbjct: 231 WSPDGRYLSFLSDREGTPQIYLLPLRGGEARQLSNLPLGVSEYSWRPDGAILLAHSAWKA 290

Query: 321 -DREGK---------------------------EQLYVMQSNGSDQKRISQDKEASYFDP 352
            D +G                            EQL+++  +G+   R++ +        
Sbjct: 291 ADEQGSGQGEETSYVVMRLASHWDGAGYKHGRHEQLWLLGLDGT-TTRLTSE-PVDLTQV 348

Query: 353 VWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
            WSP G  I F+              + V+     Q R L  E+   Q P+WSP GRS+ 
Sbjct: 349 CWSPDGSEIVFSANRRADPDLSVSAALWVLTLATGQLRRLTPEEELAQMPSWSPDGRSIA 408

Query: 406 FSRKKDGDTGSKL--YSIDLNG-RNETLINTPAYASD----------------PQWVG 444
           + R  D    S +  + +  NG        T A   +                PQW  
Sbjct: 409 YLRSPDQTEASNISPWIVAANGQETPRPAATGAEDINSQMWIIDELRTDYLVAPQWSP 466



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 86/275 (31%), Gaps = 39/275 (14%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD---------DEDILRVYLMDT 244
                DGA    L         + + S   ++ +Y              +      L   
Sbjct: 273 YSWRPDGA---ILLAHSAWKAADEQGSGQGEETSYVVMRLASHWDGAGYKHGRHEQLWLL 329

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI------YSVDLQSNATERLT 298
            +D    R+ +    +    +S +G   + S  +    D+      + + L +    RLT
Sbjct: 330 GLDGTTTRLTSEPVDLTQVCWSPDGSEIVFSANRRADPDLSVSAALWVLTLATGQLRRLT 389

Query: 299 NTLFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKR-------------- 340
               +    S+SPD   I +    +         +++ +NG +  R              
Sbjct: 390 PEEELAQMPSWSPDGRSIAYLRSPDQTEASNISPWIVAANGQETPRPAATGAEDINSQMW 449

Query: 341 -ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWS 398
            I + +      P WSP G  +     +  +  +  +    +    L        +P  S
Sbjct: 450 IIDELRTDYLVAPQWSPDGQALLVPGQTHGQIHLYRINPTKNTIEQLTRGNGRYLSPQLS 509

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             G+++   R  D  T   ++ +D NG N   + +
Sbjct: 510 RDGQTIALVR-ADWFTPGDVWGMDGNGENLRKLTS 543



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 77/194 (39%), Gaps = 22/194 (11%)

Query: 175 SRILFVSESVVSGIIKNS--LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           S I+F +       +  S  L V+      +R LTP  +++   P +SP+ + +AY    
Sbjct: 355 SEIVFSANRRADPDLSVSAALWVLTLATGQLRRLTP-EEELAQMPSWSPDGRSIAYLRSP 413

Query: 233 DE---DILRVYLMDTRIDRAPKRIGNFRSMI---------------LAPRFSSNGKRALI 274
           D+     +  +++       P+        I               +AP++S +G+  L+
Sbjct: 414 DQTEASNISPWIVAANGQETPRPAATGAEDINSQMWIIDELRTDYLVAPQWSPDGQALLV 473

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQS 333
             Q    + +Y ++   N  E+LT      +S   S D   I    +D      ++ M  
Sbjct: 474 PGQTHGQIHLYRINPTKNTIEQLTRGNGRYLSPQLSRDGQTIALVRADWFTPGDVWGMDG 533

Query: 334 NGSDQKRISQDKEA 347
           NG + ++++   +A
Sbjct: 534 NGENLRKLTSVNDA 547


>gi|21228491|ref|NP_634413.1| hypothetical protein MM_2389 [Methanosarcina mazei Go1]
 gi|20906975|gb|AAM32085.1| conserved protein [Methanosarcina mazei Go1]
          Length = 771

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 31/225 (13%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDD 233
           SRI ++S         + L  ++ DG+N + +    +       ++P+   +A+ A Y +
Sbjct: 33  SRIAYIS---SDHNGSDRLVTLNPDGSNEQIVASFAEISAL--AWAPDSSGMAFNAAYSE 87

Query: 234 EDILRVYLMDTRI--------DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-- 283
           +    +YL D               ++I +++S +    +S +G R L S  ++   D  
Sbjct: 88  DGQTGIYLADLESSEPVFLVRGEIRQQIQSWQSEV----WSPDGSRILYSSNENGNSDTN 143

Query: 284 ------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 IYSV+   +   +LT+    + S  +SPD S+I+F SDR G   +++M SNG  
Sbjct: 144 ENGNSDIYSVNTDGSEKIQLTDDNSKDYSPCFSPDGSKIIFISDRTGHSSIWIMSSNGDK 203

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           ++ +++  E  + D  W+P G  IAF+  S       + + D S+
Sbjct: 204 EEELTEGFEGIH-DFSWNPNGQKIAFSSDSNS----YIQEIDYSE 243



 Score =  124 bits (311), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 98/237 (41%), Gaps = 25/237 (10%)

Query: 196 MDRDGANIRYLTPSRDQILFEP----RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           M+ DG++   L        F       +SP+  ++AY + D     R  L+    D + +
Sbjct: 1   MNSDGSDNFELVKKSYGRNFSGISGCAWSPDGSRIAYISSDHNGSDR--LVTLNPDGSNE 58

Query: 252 RIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTL------FI 303
           +I    + I A  ++ +        +  +D    IY  DL+S+    L            
Sbjct: 59  QIVASFAEISALAWAPDSSGMAFNAAYSEDGQTGIYLADLESSEPVFLVRGEIRQQIQSW 118

Query: 304 NISASYSPDSSQIVFESDREGKEQ--------LYVMQSNGSDQKRISQDKEASYFDPVWS 355
                +SPD S+I++ S+  G           +Y + ++GS++ +++ D    Y  P +S
Sbjct: 119 QSE-VWSPDGSRILYSSNENGNSDTNENGNSDIYSVNTDGSEKIQLTDDNSKDY-SPCFS 176

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKD 411
           P G  I F        +I +M  +G +E  L E    +   +W+P+G+ + FS   +
Sbjct: 177 PDGSKIIFISDRTGHSSIWIMSSNGDKEEELTEGFEGIHDFSWNPNGQKIAFSSDSN 233



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 85/207 (41%), Gaps = 21/207 (10%)

Query: 255 NFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           NF  +     +S +G R    S   + +  + +++   +  E++  +     + +++PDS
Sbjct: 19  NFSGISGC-AWSPDGSRIAYISSDHNGSDRLVTLNPDGSN-EQIVASFAEISALAWAPDS 76

Query: 314 SQIVFES--DREGKEQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDLIAFTKFS 367
           S + F +    +G+  +Y+     S+   + +     +  S+   VWSP G  I ++   
Sbjct: 77  SGMAFNAAYSEDGQTGIYLADLESSEPVFLVRGEIRQQIQSWQSEVWSPDGSRILYSSNE 136

Query: 368 GEKFA--------IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                        I  +  DGS++  L +D S   +P +SP G  +IF   + G   S +
Sbjct: 137 NGNSDTNENGNSDIYSVNTDGSEKIQLTDDNSKDYSPCFSPDGSKIIFISDRTGH--SSI 194

Query: 419 YSIDLNG-RNETLINTPAYASDPQWVG 444
           + +  NG + E L        D  W  
Sbjct: 195 WIMSSNGDKEEELTEGFEGIHDFSWNP 221



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 91/234 (38%), Gaps = 19/234 (8%)

Query: 219 FSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +SP+  ++ Y++ ++ +          +Y ++T      + + +  S   +P FS +G +
Sbjct: 123 WSPDGSRILYSSNENGNSDTNENGNSDIYSVNTDGSEKIQ-LTDDNSKDYSPCFSPDGSK 181

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +    +     I+ +    +  E LT         S++P+  +I F SD     Q    
Sbjct: 182 IIFISDRTGHSSIWIMSSNGDKEEELTEGFEGIHDFSWNPNGQKIAFSSDSNSYIQEIDY 241

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DS 390
             +G +  +     + S  D   +P+     +         +      G+ E + V   +
Sbjct: 242 SESGDEDSQDDSSSDDSDNDTEVNPE-----YLHMEILSPDLNFAASQGTPELITVRITN 296

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           N  +P  S SG   I +   +GD   +L+    +G +E +  +    S+ QW+ 
Sbjct: 297 NSGSPVQS-SGFKFIKANFSNGDPELQLFD---DGTHEDITASDGIFSN-QWIP 345


>gi|269837252|ref|YP_003319480.1| WD40 domain-containing protein beta Propeller [Sphaerobacter
           thermophilus DSM 20745]
 gi|269786515|gb|ACZ38658.1| WD40 domain protein beta Propeller [Sphaerobacter thermophilus DSM
           20745]
          Length = 332

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 95/257 (36%), Gaps = 32/257 (12%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG+  +            PR+S +  +  +      D      +        +++  ++
Sbjct: 59  WDGSTTQITHVGD---ASYPRWSGDGSRFVFV--RTGDAFSDLYIANADGSGMEQLTFYQ 113

Query: 258 S--------------MILAPRFSSNGKRALISVQKDEAMD-IYSVDLQSNATERL--TNT 300
                            L P +S  G        ++   + ++ +        ++  +  
Sbjct: 114 PPIQPGTEAYIREAMWALDPVWSRAGDAIAFVSDRNTLKNFLWLMPAPGENPYQIQASTY 173

Query: 301 LFINIS-ASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              N+    +SPD  +IVF       +D +   QL+V+  N      + +  E +Y DP 
Sbjct: 174 NGENVEHPDFSPDGQRIVFAQRTTGENDLQRWTQLWVVDLNTEQLFPLVETNEGAY-DPA 232

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           WSP G  IA+T  +G +  I V+  +G     L    N++APTWSP G  + F +   G 
Sbjct: 233 WSPDGRWIAYTGRTGAENDIWVVPAEGGTPIRLTNFGNVRAPTWSPDGSWIAFLQTDGGS 292

Query: 414 TGSKL--YSIDLNGRNE 428
             +    +S+  +G   
Sbjct: 293 FKAVAAPFSVGEDGTPR 309



 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/253 (19%), Positives = 86/253 (33%), Gaps = 32/253 (12%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            + A        IL     D  +                PR+S +G R +     D   D
Sbjct: 36  DRDALGAAPTGRILFAQNGDIHVWDGSTTQITHVGDASYPRWSGDGSRFVFVRTGDAFSD 95

Query: 284 IYSVDLQSNATERLTNT-----LFINI---------SASYSPDSSQIVFESDREG-KEQL 328
           +Y  +   +  E+LT                        +S     I F SDR   K  L
Sbjct: 96  LYIANADGSGMEQLTFYQPPIQPGTEAYIREAMWALDPVWSRAGDAIAFVSDRNTLKNFL 155

Query: 329 YVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDG 380
           ++M + G +  +I  S     +   P +SP G  I F + +  +        + V+  + 
Sbjct: 156 WLMPAPGENPYQIQASTYNGENVEHPDFSPDGQRIVFAQRTTGENDLQRWTQLWVVDLNT 215

Query: 381 SQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT------ 433
            Q   LVE +     P WSP GR + ++ +   +    ++ +   G     +        
Sbjct: 216 EQLFPLVETNEGAYDPAWSPDGRWIAYTGRTGAEN--DIWVVPAEGGTPIRLTNFGNVRA 273

Query: 434 PAYASDPQWVGFM 446
           P ++ D  W+ F+
Sbjct: 274 PTWSPDGSWIAFL 286



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 98/259 (37%), Gaps = 42/259 (16%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI-------------LFEPRFSP 221
           SR +FV     +G   + L + + DG+ +  LT  +  I               +P +S 
Sbjct: 82  SRFVFV----RTGDAFSDLYIANADGSGMEQLTFYQPPIQPGTEAYIREAMWALDPVWSR 137

Query: 222 NQQKVAYATYDD--EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
               +A+ +  +  ++ L +           +        +  P FS +G+R + + +  
Sbjct: 138 AGDAIAFVSDRNTLKNFLWLMPAPGENPYQIQASTYNGENVEHPDFSPDGQRIVFAQRTT 197

Query: 280 E------AMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                     ++ VDL +     L  TN    +   ++SPD   I +      +  ++V+
Sbjct: 198 GENDLQRWTQLWVVDLNTEQLFPLVETNEGAYD--PAWSPDGRWIAYTGRTGAENDIWVV 255

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI----GVMKKDG----SQE 383
            + G    R++     +   P WSP G  IAF +  G  F        + +DG     + 
Sbjct: 256 PAEGGTPIRLT--NFGNVRAPTWSPDGSWIAFLQTDGGSFKAVAAPFSVGEDGTPRLGEP 313

Query: 384 RLLVEDSNLQAP---TWSP 399
           + L + S + A    +W+P
Sbjct: 314 QELFKGSGIDATSGLSWAP 332


>gi|312083738|ref|XP_003143987.1| hypothetical protein LOAG_08407 [Loa loa]
 gi|307760846|gb|EFO20080.1| hypothetical protein LOAG_08407 [Loa loa]
          Length = 587

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 62/316 (19%), Positives = 102/316 (32%), Gaps = 79/316 (25%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-------DILRVYLMDTRIDRAPKRI 253
           +NIR LT           FS +   + +              I ++ L      + P+RI
Sbjct: 24  SNIRQLTFGGQNAEGY--FSFDGNWLTFQAAGIPEYGTSCDQIYKLDLTIPPDKQIPQRI 81

Query: 254 GNFRSMILAPRFSSNGKRALISVQKD---------------------------------- 279
                      F  +    + +                                      
Sbjct: 82  STGIGACTCSYFYPDNHHMIYAGTFQYANFTSSINIESCPTKTCQTQRAKIDPHLRHLCN 141

Query: 280 --------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                      DI+ V+       RLT+T+  +   + SPD  +IVF S R G  ++++M
Sbjct: 142 TSYTWDLFPEYDIFKVNEFGTVISRLTDTVGYDAEGAVSPDGRKIVFTSLRSGDPEIWIM 201

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------------------KF 371
            S+G++ K+++ D+      P +SP G  I F                          + 
Sbjct: 202 NSDGTEPKQLT-DELGYDGGPFFSPDGSKIVFRASRPNTSEEIQTYKDLLSYNLVSPLEM 260

Query: 372 AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK---KDGDTGS-KLYSIDLNGR 426
            +  M  DGS  R +     +  AP + P  R +IFS       G  G+  LY ID  G 
Sbjct: 261 ELYTMNIDGSGLRKVTSLGGSNWAPFYMPDNRHIIFSSNFNETGGHFGAFNLYMIDEAGG 320

Query: 427 NETLI--NTPAYASDP 440
           N   +  N   + + P
Sbjct: 321 NVERVTFNEGGFDAFP 336



 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 85/221 (38%), Gaps = 33/221 (14%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             +  + + DI +V    T I     R+ +          S +G++ + +  +    +I+
Sbjct: 144 YTWDLFPEYDIFKVNEFGTVIS----RLTDTVGYDAEGAVSPDGRKIVFTSLRSGDPEIW 199

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-------------------- 325
            ++      ++LT+ L  +    +SPD S+IVF + R                       
Sbjct: 200 IMNSDGTEPKQLTDELGYDGGPFFSPDGSKIVFRASRPNTSEEIQTYKDLLSYNLVSPLE 259

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKD 379
            +LY M  +GS  ++++    +++  P + P    I F+            F + ++ + 
Sbjct: 260 MELYTMNIDGSGLRKVTSLGGSNW-APFYMPDNRHIIFSSNFNETGGHFGAFNLYMIDEA 318

Query: 380 GSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           G     +   E      P +  +G+  ++   ++G + S+L
Sbjct: 319 GGNVERVTFNEGGFDAFPMFDRTGQRFVWGSSRNGRSRSEL 359



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 100/292 (34%), Gaps = 68/292 (23%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +K+ + +    D   +++M++     PK++ +       P FS +G + +    
Sbjct: 178 AVSPDGRKIVFTSLRSGDP-EIWIMNSD-GTEPKQLTDELGYDGGPFFSPDGSKIVFRAS 235

Query: 278 KDEAM--------------------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +                        ++Y++++  +   ++T+    N +  Y PD+  I+
Sbjct: 236 RPNTSEEIQTYKDLLSYNLVSPLEMELYTMNIDGSGLRKVTSLGGSNWAPFYMPDNRHII 295

Query: 318 FESDRE------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           F S+        G   LY++   G + +R++ ++      P++   G    +      + 
Sbjct: 296 FSSNFNETGGHFGAFNLYMIDEAGGNVERVTFNEGGFDAFPMFDRTGQRFVWGSSRNGRS 355

Query: 371 -----------FAIGVMKKDG----------------------SQERLLVEDSNLQAPTW 397
                           MK                         ++ + L  D    A ++
Sbjct: 356 RSELNLFIADWHDTYTMKIGNDIKKENLAIPNLQHTMMKKNYPTKMKRLTNDDINIAGSF 415

Query: 398 SPSGRSLIFSRKKD---GDTGSKLYSIDLN--GRNETLINTP-AYASDPQWV 443
           S   + +I+          T  +++ +DL    R    ++T    A  P ++
Sbjct: 416 SFDDKRVIYEGYGTHLYDATCEQVFDLDLTNASRRIRRVSTGIGTARSPVYI 467



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 46/372 (12%), Positives = 102/372 (27%), Gaps = 124/372 (33%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           +I+F S           + +M+ DG   + LT         P FSP+  K+ +       
Sbjct: 185 KIVFTSLRSGDP----EIWIMNSDGTEPKQLTDEL-GYDGGPFFSPDGSKIVFRASRPNT 239

Query: 236 ILRVYLMDTRI------------------DRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              +      +                      +++ +      AP +  + +  + S  
Sbjct: 240 SEEIQTYKDLLSYNLVSPLEMELYTMNIDGSGLRKVTSLGGSNWAPFYMPDNRHIIFSSN 299

Query: 278 KD------EAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQ--- 327
            +       A ++Y +D      ER+T N    +    +     + V+ S R G+ +   
Sbjct: 300 FNETGGHFGAFNLYMIDEAGGNVERVTFNEGGFDAFPMFDRTGQRFVWGSSRNGRSRSEL 359

Query: 328 ---------LYVMQSNG----------------------SDQKRISQDKEASYFDPVWSP 356
                     Y M+                         +  KR++ D         +S 
Sbjct: 360 NLFIADWHDTYTMKIGNDIKKENLAIPNLQHTMMKKNYPTKMKRLTNDD--INIAGSFSF 417

Query: 357 QGDLIAFTKFSG--------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS-------- 400
               + +  +          + F + +        R+       ++P +           
Sbjct: 418 DDKRVIYEGYGTHLYDATCEQVFDLDLTNASRRIRRVSTGIGTARSPVYISDDNIIIYAS 477

Query: 401 ----------------------------------------GRSLIFSRKKDGDTGSKLYS 420
                                                   G+ +IF+ +++GD    L+ 
Sbjct: 478 NILTANRSALNSCPRRACTDARQSWIKEICYDGEASISSDGKHIIFTSRRNGD--PDLWI 535

Query: 421 IDLNGRNETLIN 432
           +D++G+N   I 
Sbjct: 536 MDMDGKNAKQIT 547



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 83/272 (30%), Gaps = 44/272 (16%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR--- 238
                     +L ++D  G N+  +T +       P F    Q+  + +  +        
Sbjct: 301 NETGGHFGAFNLYMIDEAGGNVERVTFNEGGFDAFPMFDRTGQRFVWGSSRNGRSRSELN 360

Query: 239 ---VYLMDTRIDRAP--------------------------KRIGNFRSMILAPRFSSNG 269
                  DT   +                            KR+ N   + +A  FS + 
Sbjct: 361 LFIADWHDTYTMKIGNDIKKENLAIPNLQHTMMKKNYPTKMKRLTNDD-INIAGSFSFDD 419

Query: 270 KRALISVQKDEAMD-----IYSVDL--QSNATERLTNTLFINISASYSPDSSQIVFESD- 321
           KR +         D     ++ +DL   S    R++  +    S  Y  D + I++ S+ 
Sbjct: 420 KRVIYEGYGTHLYDATCEQVFDLDLTNASRRIRRVSTGIGTARSPVYISDDNIIIYASNI 479

Query: 322 -REGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               +  L           R S  KE  Y  +   S  G  I FT        + +M  D
Sbjct: 480 LTANRSALNSCPRRACTDARQSWIKEICYDGEASISSDGKHIIFTSRRNGDPDLWIMDMD 539

Query: 380 GSQERLLVED-SNLQAPTWSPSGRSLIFSRKK 410
           G   + + +          SP GR ++F   +
Sbjct: 540 GKNAKQITKAIGYEGGGKISPDGRFIVFHASR 571



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 61/170 (35%), Gaps = 10/170 (5%)

Query: 210 RDQILFEPRFSPNQQKVAY-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            D I     FS + ++V Y       YD        L  T   R  +R+        +P 
Sbjct: 406 NDDINIAGSFSFDDKRVIYEGYGTHLYDATCEQVFDLDLTNASRRIRRVSTGIGTARSPV 465

Query: 265 FSSNGKRALISVQ----KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           + S+    + +         A++       ++A +     +  +  AS S D   I+F S
Sbjct: 466 YISDDNIIIYASNILTANRSALNSCPRRACTDARQSWIKEICYDGEASISSDGKHIIFTS 525

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            R G   L++M  +G + K+I++           SP G  I F     + 
Sbjct: 526 RRNGDPDLWIMDMDGKNAKQITK-AIGYEGGGKISPDGRFIVFHASRPKS 574



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 48/159 (30%), Gaps = 5/159 (3%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD---QILFEPRFSPNQQKVAYA 229
           F+ + +                V D D  N                 P +  +   + YA
Sbjct: 417 FDDKRVIYEGYGTHLYDATCEQVFDLDLTNASRRIRRVSTGIGTARSPVYISDDNIIIYA 476

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +              R      R    + +        SS+GK  + + +++   D++ +
Sbjct: 477 SNILTANRSALNSCPRRACTDARQSWIKEICYDGEASISSDGKHIIFTSRRNGDPDLWIM 536

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           D+     +++T  +        SPD   IVF + R    
Sbjct: 537 DMDGKNAKQITKAIGYEGGGKISPDGRFIVFHASRPKSP 575



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 70/214 (32%), Gaps = 28/214 (13%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDL----QSNATERLTNTLF 302
           R   F        FS +G                   IY +DL         +R++  + 
Sbjct: 27  RQLTFGGQNAEGYFSFDGNWLTFQAAGIPEYGTSCDQIYKLDLTIPPDKQIPQRISTGIG 86

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               + + PD+  +++    +       +       K  +   + +  DP        + 
Sbjct: 87  ACTCSYFYPDNHHMIYAGTFQYANFTSSINIESCPTK--TCQTQRAKIDPHL----RHLC 140

Query: 363 FTKFSGEKF---AIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            T ++ + F    I  + + G+    L +          SP GR ++F+  + GD   ++
Sbjct: 141 NTSYTWDLFPEYDIFKVNEFGTVISRLTDTVGYDAEGAVSPDGRKIVFTSLRSGD--PEI 198

Query: 419 YSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           + ++ +G     +         P ++ D   + F
Sbjct: 199 WIMNSDGTEPKQLTDELGYDGGPFFSPDGSKIVF 232


>gi|189460182|ref|ZP_03008967.1| hypothetical protein BACCOP_00819 [Bacteroides coprocola DSM 17136]
 gi|189433043|gb|EDV02028.1| hypothetical protein BACCOP_00819 [Bacteroides coprocola DSM 17136]
          Length = 1116

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 101/288 (35%), Gaps = 35/288 (12%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           ++ +    +  +    L V    GA+           L +   SP+ +++ +      DI
Sbjct: 19  LILIFAKTIKYMFMKKLLVTLALGASSFSAFAITPLWLRDVNISPDGKEIVFCY--KGDI 76

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            +V            R+ +  S    P +S +GK+   +  +    D++ +       +R
Sbjct: 77  YKVK----AAGGEAVRLTSQDSYESNPVWSPDGKQIAFASDRFGNFDLFIMPADGGTAKR 132

Query: 297 LTNTLFINISASYSPDSSQIVFESD-----------REGKEQLYVMQSNGSDQKRISQDK 345
           LT      I ++++PD   +VF +            + G  +LY +   G   +++    
Sbjct: 133 LTMNSASEIPSTFTPDGKYVVFSASIQDPASSALFPKSGMTELYKVPVAGGRTQQML--- 189

Query: 346 EASYFDPVWSPQGDLIAF------------TKFSGEKFAIGVMKKDGSQERLLVE-DSNL 392
                   ++P GD   +               S     + +      +   L E     
Sbjct: 190 GTPAEMVCYAPSGDFFLYQDQKGVESEWRKHHTSSITRDVWMYDTKTGKHTNLTEVAGED 249

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + P  SP G+ + F  +++G +   +Y   L+   E    T ++ ++P
Sbjct: 250 RNPVLSPDGKQVYFLSERNGGS-FNVYRFPLDNPKEIQPVT-SFKTNP 295



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 108/286 (37%), Gaps = 34/286 (11%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           F          K    V       +R+L+   D  L    ++ + +   Y    D    +
Sbjct: 272 FNVYRFPLDNPKEIQPVTSFKTNPVRFLSMGNDGTLC---YTYDGE--IYTQPVDGKPKK 326

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V +   R D       +F         S +GK+    V+     +++   ++   T+++T
Sbjct: 327 VAVSLVRDDEELPVSYSFTRGASEAVVSPDGKQVAFIVRG----EVFVTSVEYGTTKQIT 382

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVM-----------QSNGSDQKRISQDKEA 347
           +T       S+  D+  +V+ S+R GK  LY+             +   +++ +  DK+ 
Sbjct: 383 HTPEAERGLSFGADNRSLVYSSERNGKRDLYIAKISRKEDLNFPNATLIEEEPLIHDKKL 442

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSG 401
               P +SP G  +AF +       + V+  D  + R + + S           +WSP G
Sbjct: 443 ERDYPQFSPDGKEVAFIEDRN---RLMVVNLDTKKVRQVTDGSTWYTRSGGFDYSWSPDG 499

Query: 402 RS--LIFSRKKDGDTGSKLYSIDLNGRNET--LINTPAYASDPQWV 443
           +   L F   K  D  S +  +  +G+ +   L N+   +  P+WV
Sbjct: 500 KWFTLEFIGNKH-DPYSDIGLVSADGKGQIINLTNSGYTSGSPRWV 544



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            SP G  I F         I  +K  G +  RL  +DS    P WSP G+ + F+  + G
Sbjct: 61  ISPDGKEIVFCYKGD----IYKVKAAGGEAVRLTSQDSYESNPVWSPDGKQIAFASDRFG 116

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +    L+ +  +G     +   + +  P 
Sbjct: 117 NF--DLFIMPADGGTAKRLTMNSASEIPS 143



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 25/180 (13%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           GA+ R L  S ++         N ++  Y           +   T I+  P  I + +  
Sbjct: 394 GADNRSLVYSSER---------NGKRDLYIAKISRKEDLNFPNATLIEEEP-LIHDKKLE 443

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----SYSPDSS 314
              P+FS +GK       ++    +  V+L +    ++T+       +     S+SPD  
Sbjct: 444 RDYPQFSPDGKEVAFIEDRN---RLMVVNLDTKKVRQVTDGSTWYTRSGGFDYSWSPDGK 500

Query: 315 QIVFESDREGKEQ-----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
              F  +  G +      + ++ ++G  Q     +   +   P W   G+ I F      
Sbjct: 501 W--FTLEFIGNKHDPYSDIGLVSADGKGQIINLTNSGYTSGSPRWVMGGNAILFITERYG 558



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 60/324 (18%), Positives = 110/324 (33%), Gaps = 44/324 (13%)

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
           K+   +P + R ++    +      +   G  +  I  +S          +L        
Sbjct: 379 KQITHTPEAERGLSFGADNRSLVYSSERNGKRDLYIAKISRKEDLNFPNATLI------- 431

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--RSM 259
               L   +      P+FSP+ ++VA+   +D + L V  +DT+  R       +  RS 
Sbjct: 432 EEEPLIHDKKLERDYPQFSPDGKEVAF--IEDRNRLMVVNLDTKKVRQVTDGSTWYTRSG 489

Query: 260 ILAPRFSSNGKR--ALISVQK-DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQ 315
                +S +GK         K D   DI  V          LTN+ + + S  +    + 
Sbjct: 490 GFDYSWSPDGKWFTLEFIGNKHDPYSDIGLVSADGKGQIINLTNSGYTSGSPRWVMGGNA 549

Query: 316 IVFESDREGKEQ-----------LYVMQSNGSDQKRIS-------------QDKEASYFD 351
           I+F ++R G              +  +  +  D+ R+S             Q+K A   D
Sbjct: 550 ILFITERYGMRNHASWGSLNDVMIAFLNQDAYDKFRLSKEDYELQKELEKEQEKAAQKDD 609

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                            +K    V++ +G      RL    S+L +   S  G  L +  
Sbjct: 610 KASKKDKKSDDKDAKEEKKVKDIVVETEGIEDRIIRLTPNSSDLASTIISKDGEKLYYLS 669

Query: 409 KKDGDTGSKLYSIDLNGRNETLIN 432
               + G  ++ +DL  R   L++
Sbjct: 670 --AFEDGFDMWKMDLRKRETKLLH 691



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 7/48 (14%)

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
           SP G+ ++F  K        +Y +   G     L +  +Y S+P W  
Sbjct: 62  SPDGKEIVFCYK------GDIYKVKAAGGEAVRLTSQDSYESNPVWSP 103


>gi|103486587|ref|YP_616148.1| amidohydrolase [Sphingopyxis alaskensis RB2256]
 gi|98976664|gb|ABF52815.1| amidohydrolase [Sphingopyxis alaskensis RB2256]
          Length = 1078

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 84/212 (39%), Gaps = 27/212 (12%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I       +    + +G+     +  D    IY+V ++     R+   L       ++PD
Sbjct: 50  IAVDEGSWMNVDVAPDGRTIAFDLLGD----IYTVPIEGGTPTRIAEGLAYEHQPRFAPD 105

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFS 367
             +I F SDR G + +++M  +GSD++++S++       P WSP G  +       T  S
Sbjct: 106 GKRIAFVSDRGGGDNVWIMNRDGSDKRQVSKEDFRLLNQPNWSPDGQFLVAKKHFTTSRS 165

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLIFSRK--------KDGD 413
                + +    G     LV+  + +       P ++P G+S+ ++R            D
Sbjct: 166 LGTGEVWIYHVSGGAGVPLVKKPDERHQKELGEPIFAPDGKSVYYTRNVTPGPIFEYAQD 225

Query: 414 TGSKLYSIDL----NGRNETLINTPAYASDPQ 441
           +   L+ I+     +G   T+ +    A  P 
Sbjct: 226 SNRDLFHIERYSLEDGSISTVASGNGGAVRPT 257



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 113/326 (34%), Gaps = 72/326 (22%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATY 231
           RI FVS+          + +M+RDG++ R ++    ++L +P +SP+ Q +     + T 
Sbjct: 108 RIAFVSDRGGGDN----VWIMNRDGSDKRQVSKEDFRLLNQPNWSPDGQFLVAKKHFTTS 163

Query: 232 DDEDILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRALIS----------VQ 277
                  V++           +       +  +  P F+ +GK    +            
Sbjct: 164 RSLGTGEVWIYHVSGGAGVPLVKKPDERHQKELGEPIFAPDGKSVYYTRNVTPGPIFEYA 223

Query: 278 KDEAMDIY---SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +D   D++      L+  +   + +     +  + SPD  ++ F      + +LYV    
Sbjct: 224 QDSNRDLFHIERYSLEDGSISTVASGNGGAVRPTPSPDGKRLAFVRREGARSKLYVKDLA 283

Query: 335 GSDQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + ++          +      Y +  W+P    I F  ++G K  +  +   G + R
Sbjct: 284 SGAETKLYDALDQDVQETWAVTGVYPNMAWTPDSRDILF--WAGGK--LRRVGAGGGEAR 339

Query: 385 LL---------------------VEDSNLQAPTW---SPSGRSLIFSRKKDGDTGSKLYS 420
           ++                      +    + P W   SP GRS++F      +T  KL+ 
Sbjct: 340 VIPFSIDDDRVIVDAAHPAVEVAPDSFTTKMPRWAEVSPDGRSIVF------ETLGKLWV 393

Query: 421 IDLNGRNETLINTPAYASD---PQWV 443
               G     + +   A+    P W 
Sbjct: 394 KPATGGTARRLTSAKDAAMEAWPSWS 419



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 81/231 (35%), Gaps = 25/231 (10%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRF---SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  D A+              PR+   SP+ + + + T           +        +R
Sbjct: 350 VIVDAAHPAVEVAPDSFTTKMPRWAEVSPDGRSIVFETLGK------LWVKPATGGTARR 403

Query: 253 IGNFRSMILA--PRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASY 309
           + + +   +   P +S +GK  +     D    +I+       ++ ++T T        +
Sbjct: 404 LTSAKDAAMEAWPSWSRDGKSIVFVRWTDAGLGEIHVTGASGGSSRKVTATPGHYAEPRF 463

Query: 310 SPDSSQIVFESDREGK---------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           SPD   IVFE  R G            +Y + + G   +RIS+D       P +    D 
Sbjct: 464 SPDDRTIVFEWRRGGGLVSERWGEDPGVYRIAATGGTAERISRDG----AKPQFGAANDR 519

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +     +  K  +     DG  +R+      +     SP GR+L F +  D
Sbjct: 520 VFMVASTDGKSQLVSTDLDGEDKRVHASGELVSDYEVSPDGRTLAFRQNYD 570



 Score =  106 bits (265), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 58/328 (17%), Positives = 111/328 (33%), Gaps = 59/328 (17%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN----IRYLTPSRDQILFEPRFSPNQ 223
               D    +     +    +    + +    G      ++       + L EP F+P+ 
Sbjct: 146 NWSPDGQFLVAKKHFTTSRSLGTGEVWIYHVSGGAGVPLVKKPDERHQKELGEPIFAPDG 205

Query: 224 QKVAYATYDDEDILRVYLMDTRID-----------RAPKRIGNFRSMILAPRFSSNGKRA 272
           + V Y        +  Y  D+  D            +   + +     + P  S +GKR 
Sbjct: 206 KSVYYTRNVTPGPIFEYAQDSNRDLFHIERYSLEDGSISTVASGNGGAVRPTPSPDGKRL 265

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----------SASYSPDSSQIVFESD 321
               ++     +Y  DL S A  +L + L  ++           + +++PDS  I+F + 
Sbjct: 266 AFVRREGARSKLYVKDLASGAETKLYDALDQDVQETWAVTGVYPNMAWTPDSRDILFWA- 324

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYF-------------------DPVW---SPQGD 359
                +L  + + G + + I    +                        P W   SP G 
Sbjct: 325 ---GGKLRRVGAGGGEARVIPFSIDDDRVIVDAAHPAVEVAPDSFTTKMPRWAEVSPDGR 381

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQA-PTWSPSGRSLIFSRKKDGDTGS 416
            I F         + V    G   R L    D+ ++A P+WS  G+S++F R  D   G 
Sbjct: 382 SIVFETLG----KLWVKPATGGTARRLTSAKDAAMEAWPSWSRDGKSIVFVRWTDAGLGE 437

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVG 444
              +    G +  +  TP + ++P++  
Sbjct: 438 IHVTGASGGSSRKVTATPGHYAEPRFSP 465



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 97/236 (41%), Gaps = 32/236 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P+ + +A+    D     +Y +       P RI    +    PRF+ +GKR      + 
Sbjct: 63  APDGRTIAFDLLGD-----IYTVPIE-GGTPTRIAEGLAYEHQPRFAPDGKRIAFVSDRG 116

Query: 280 EAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV----FESDRE-GKEQLYVMQS 333
              +++ ++   +   +++   F  ++  ++SPD   +V    F + R  G  ++++   
Sbjct: 117 GGDNVWIMNRDGSDKRQVSKEDFRLLNQPNWSPDGQFLVAKKHFTTSRSLGTGEVWIYHV 176

Query: 334 NGSDQKRISQDKEASY----FDPVWSPQGDLIAFTKF-------------SGEKFAIGVM 376
           +G     + +  +  +     +P+++P G  + +T+              + + F I   
Sbjct: 177 SGGAGVPLVKKPDERHQKELGEPIFAPDGKSVYYTRNVTPGPIFEYAQDSNRDLFHIERY 236

Query: 377 KK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              DGS   +   +     PT SP G+ L F R++     SKLY  DL    ET +
Sbjct: 237 SLEDGSISTVASGNGGAVRPTPSPDGKRLAFVRREGAR--SKLYVKDLASGAETKL 290



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 93/300 (31%), Gaps = 46/300 (15%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           ++G + +  +      ++  +   +  +  +G     +         +PRF+P+ +++A+
Sbjct: 53  DEGSWMNVDVAPDGRTIAFDLLGDIYTVPIEGGTPTRIAEGL-AYEHQPRFAPDGKRIAF 111

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAMD 283
            + D      V++M+       +       ++  P +S +G+  +     +  +     +
Sbjct: 112 VS-DRGGGDNVWIMNRDGSDKRQVSKEDFRLLNQPNWSPDGQFLVAKKHFTTSRSLGTGE 170

Query: 284 IYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFE--------------SDREG 324
           ++   +   A   L                ++PD   + +               S+R+ 
Sbjct: 171 VWIYHVSGGAGVPLVKKPDERHQKELGEPIFAPDGKSVYYTRNVTPGPIFEYAQDSNRD- 229

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              +            ++         P  SP G  +AF +  G +  + V       E 
Sbjct: 230 LFHIERYSLEDGSISTVAS-GNGGAVRPTPSPDGKRLAFVRREGARSKLYVKDLASGAET 288

Query: 385 LLVE------------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            L +                    W+P  R ++F        G KL  +   G    +I 
Sbjct: 289 KLYDALDQDVQETWAVTGVYPNMAWTPDSRDILFWA------GGKLRRVGAGGGEARVIP 342



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 86/251 (34%), Gaps = 38/251 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--------------- 262
            ++P+ + + +  +    + RV          P  I + R ++ A               
Sbjct: 312 AWTPDSRDILF--WAGGKLRRVGAGGGEARVIPFSIDDDRVIVDAAHPAVEVAPDSFTTK 369

Query: 263 -PRF---SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQI 316
            PR+   S +G+  +          ++          RLT+     +    S+S D   I
Sbjct: 370 MPRWAEVSPDGRSIVFET----LGKLWVKPATGGTARRLTSAKDAAMEAWPSWSRDGKSI 425

Query: 317 VFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           VF    + G  +++V  ++G   ++++      Y +P +SP    I F    G       
Sbjct: 426 VFVRWTDAGLGEIHVTGASGGSSRKVT-ATPGHYAEPRFSPDDRTIVFEWRRGGGLVSER 484

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-------DTGSKLYSIDLNGRNE 428
             +D    R+       +    S  G    F    D        D  S+L S DL+G ++
Sbjct: 485 WGEDPGVYRIAATGGTAE--RISRDGAKPQFGAANDRVFMVASTDGKSQLVSTDLDGEDK 542

Query: 429 TLINTPAYASD 439
            +  +    SD
Sbjct: 543 RVHASGELVSD 553


>gi|238507612|ref|XP_002385007.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
 gi|220688526|gb|EED44878.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
          Length = 647

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 68/362 (18%), Positives = 126/362 (34%), Gaps = 85/362 (23%)

Query: 146 SSPASWRKIAHTISD---DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           SS A+ RK  H   +   D+       +G        V      G   + L V + DG+N
Sbjct: 15  SSFATARKAMHFAMEQNLDMLPRTHSARGLPAPGKKGVMLMNRIGPSSSELYVANIDGSN 74

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R L  +  +  +   FSP+ Q + + +  + D               +++    S+  A
Sbjct: 75  ERKLLGNNSRFDYHASFSPDGQWITFTSERNGDGNSDLYRCRADGSGLEKLVATSSVEDA 134

Query: 263 PRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINIS---------ASYSPD 312
              S +  +       +    +++ +DL++     LTN   +             S+SPD
Sbjct: 135 GVLSPDASKVAWVSTANGYTTNVWVMDLKTGEQRNLTNLEGVKGDPTKPNGYFRPSWSPD 194

Query: 313 SSQIVFESDREGKEQ---------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              I F SDR  + +               +YV++ +G+D ++I+  +  S   P WSP 
Sbjct: 195 GEWIAFSSDRNTEWRGHGNGTGWEHTQELSVYVIRPDGTDFRKIASREGWSLGSPRWSPD 254

Query: 358 GDLIAFTKFSGEK--------------FAI----------GVMKKDGSQERL-------- 385
           G  I F + + E                 I           +   +G+  ++        
Sbjct: 255 GSRIIFYEITTENTWDAHRPESVASATSQIVSVDFATGLDRIQHTNGTGVKVSPQYVTAD 314

Query: 386 -----------------------LVEDSNLQAPTWSPSGRSLIF--SRKKDGDTGSKLYS 420
                                   V +  +++P+WSP G+S+++  S  +      KLYS
Sbjct: 315 NIGYLIKGGSSEGIHYTAESSTGTVINGTMRSPSWSPDGKSVVYEKSEFEARPMEKKLYS 374

Query: 421 ID 422
            D
Sbjct: 375 WD 376



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 85/233 (36%), Gaps = 25/233 (10%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------SVQ 277
             +     D  D   V+   T+ + +   +G   +    P +S +G+            +
Sbjct: 406 SSIVTMRPDGLDQTLVFDPLTQSNISSSEVGQGLAGAFQPSWSPDGEWIAFGIGAWFQSR 465

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 I       +  E LTN        SYS D   +V+      +  L +M      
Sbjct: 466 ATGKGYIARAKADGSYHEILTNGTINAGFPSYSLDGRYLVYRV-WGTEFGLRIMDLTDKS 524

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDS-NLQAP 395
            + ++  ++     P +SP G  I FT+ +    F +  ++ DGS  ++L     N    
Sbjct: 525 VRVLTTTRD---NLPFYSPDGQRIVFTRRTSYTNFDVCTIRPDGSDLKVLTSSGANDAHA 581

Query: 396 TWSPSGRSLIFSRKKDG------------DTGSKLYSIDLNGRNETLINTPAY 436
           TW+  GR ++++    G                +++ ++ +G N+T++    +
Sbjct: 582 TWTADGR-ILYASGMYGFRDEAAIYDNTFQPYGQIFVMNADGSNKTILTDSIW 633



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 52/375 (13%), Positives = 112/375 (29%), Gaps = 117/375 (31%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +      + S+ V+  DG + R +       L  PR+SP+  ++ +     E+    +  
Sbjct: 215 TGWEHTQELSVYVIRPDGTDFRKIASREGWSLGSPRWSPDGSRIIFYEITTENTWDAHRP 274

Query: 243 DTRIDRAPKRI------------------------------------------------- 253
           ++      + +                                                 
Sbjct: 275 ESVASATSQIVSVDFATGLDRIQHTNGTGVKVSPQYVTADNIGYLIKGGSSEGIHYTAES 334

Query: 254 ---GNFRSMILAPRFSSNGK---------------------------------------- 270
                    + +P +S +GK                                        
Sbjct: 335 STGTVINGTMRSPSWSPDGKSVVYEKSEFEARPMEKKLYSWDPEWEYRFTDVFPDLSQQG 394

Query: 271 RALISVQKDEAMDIYSVDLQSNATE----RLTN----------TLFINISASYSPDSSQI 316
           R  I+ ++     I ++             LT            L      S+SPD   I
Sbjct: 395 RLAITQKQLGNSSIVTMRPDGLDQTLVFDPLTQSNISSSEVGQGLAGAFQPSWSPDGEWI 454

Query: 317 VF------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            F      +S   GK  +   +++GS  + ++ +   +   P +S  G  + + +  G +
Sbjct: 455 AFGIGAWFQSRATGKGYIARAKADGSYHEILT-NGTINAGFPSYSLDGRYLVY-RVWGTE 512

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ET 429
           F + +M       R+L    +   P +SP G+ ++F+R +   T   + +I  +G + + 
Sbjct: 513 FGLRIMDLTDKSVRVLTTTRD-NLPFYSPDGQRIVFTR-RTSYTNFDVCTIRPDGSDLKV 570

Query: 430 LINTPAYASDPQWVG 444
           L ++ A  +   W  
Sbjct: 571 LTSSGANDAHATWTA 585



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 81/207 (39%), Gaps = 32/207 (15%)

Query: 269 GKRALISVQKDE--AMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDR--E 323
           GK+ ++ + +    + ++Y  ++  +   +L  N    +  AS+SPD   I F S+R  +
Sbjct: 48  GKKGVMLMNRIGPSSSELYVANIDGSNERKLLGNNSRFDYHASFSPDGQWITFTSERNGD 107

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQ 382
           G   LY  +++GS  +++           V SP    +A+   +      + VM     +
Sbjct: 108 GNSDLYRCRADGSGLEKLVATSSVED-AGVLSPDASKVAWVSTANGYTTNVWVMDLKTGE 166

Query: 383 ERLLVE----------DSNLQAPTWSPSGRSLIFSRKKDGDTGS-------------KLY 419
           +R L             +    P+WSP G  + FS  ++ +                 +Y
Sbjct: 167 QRNLTNLEGVKGDPTKPNGYFRPSWSPDGEWIAFSSDRNTEWRGHGNGTGWEHTQELSVY 226

Query: 420 SIDLNGRNETLINT-PAYA-SDPQWVG 444
            I  +G +   I +   ++   P+W  
Sbjct: 227 VIRPDGTDFRKIASREGWSLGSPRWSP 253



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 22/194 (11%)

Query: 214 LFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNG 269
            F+P +SP+ + +A+   A +      + Y+   + D    + + N       P +S +G
Sbjct: 442 AFQPSWSPDGEWIAFGIGAWFQSRATGKGYIARAKADGSYHEILTNGTINAGFPSYSLDG 501

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQL 328
           +  +  V   E   +  +DL   +   LT T   +    YSPD  +IVF          +
Sbjct: 502 RYLVYRVWGTEFG-LRIMDLTDKSVRVLTTTR--DNLPFYSPDGQRIVFTRRTSYTNFDV 558

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-------------IGV 375
             ++ +GSD K ++    A+     W+  G ++  +   G +               I V
Sbjct: 559 CTIRPDGSDLKVLTSSG-ANDAHATWTADGRILYASGMYGFRDEAAIYDNTFQPYGQIFV 617

Query: 376 MKKDGSQERLLVED 389
           M  DGS + +L + 
Sbjct: 618 MNADGSNKTILTDS 631



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 62/154 (40%), Gaps = 22/154 (14%)

Query: 313 SSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSG 368
             + V   +R G    +LYV   +GS+++++  +     +   +SP G  I FT  +   
Sbjct: 48  GKKGVMLMNRIGPSSSELYVANIDGSNERKLLGNNSRFDYHASFSPDGQWITFTSERNGD 107

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGR 426
               +   + DGS    LV  S+++     SP    + +    +G   + ++ +DL  G 
Sbjct: 108 GNSDLYRCRADGSGLEKLVATSSVEDAGVLSPDASKVAWVSTANG-YTTNVWVMDLKTGE 166

Query: 427 NETLINT---------------PAYASDPQWVGF 445
              L N                P+++ D +W+ F
Sbjct: 167 QRNLTNLEGVKGDPTKPNGYFRPSWSPDGEWIAF 200



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 53/134 (39%), Gaps = 19/134 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L +MD    ++R LT +RD +   P +SP+ Q++ +          V  +        K 
Sbjct: 515 LRIMDLTDKSVRVLTTTRDNL---PFYSPDGQRIVFTRRTSYTNFDVCTIRPD-GSDLKV 570

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMD--------------IYSVDLQSNATERLT 298
           + +  +      ++++G R L +       D              I+ ++   +    LT
Sbjct: 571 LTSSGANDAHATWTADG-RILYASGMYGFRDEAAIYDNTFQPYGQIFVMNADGSNKTILT 629

Query: 299 NTLFINISASYSPD 312
           ++++ +  A Y P+
Sbjct: 630 DSIWEDSMALYLPN 643


>gi|284116165|ref|ZP_06386711.1| WD40 domain protein beta Propeller [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283829531|gb|EFC33885.1| WD40 domain protein beta Propeller [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 279

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 55/254 (21%), Positives = 111/254 (43%), Gaps = 20/254 (7%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI--LRVYLMDTRIDRAPKRI 253
           M+ DG+    LT    +    P++SP+  ++ +++  D       +YLMD       +R+
Sbjct: 1   MNPDGSEEVRLTHHLAR-DGGPKWSPSGDRIIFSSDRDGAPGDWDLYLMDAD-GSNVQRV 58

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                   +P +S +GK+   S  +     IY   +     ER+     +    ++SPD 
Sbjct: 59  FKKEVARTSPTWSPDGKQIAYSRWEQGKSFIYIASIDGKKEERI----ALGSQPAWSPDG 114

Query: 314 SQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAF-----TKF 366
           ++I F         ++ ++       K     KE ++     WSP+GD +AF      + 
Sbjct: 115 TEIAFIEGAPRDPKRISMLDVRMRKHKFFFPPKEPAWVRHHAWSPEGDRLAFAWYNRIEL 174

Query: 367 SGEKFA---IGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             E F    I ++ +DG+  + ++E+      P WSP G +L++S+    D   +++ + 
Sbjct: 175 RQEDFKLETIYIVNRDGTGLQQIIEEGKRAVEPVWSPRGDALLYSQLDKNDM-QQIFKVT 233

Query: 423 LNGRNETLINTPAY 436
           L+G     ++ P++
Sbjct: 234 LDGGEPVQLSNPSF 247



 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 11/164 (6%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQ 343
           ++   +   RLT+ L  +    +SP   +I+F SDR+G      LY+M ++GS+ +R+  
Sbjct: 1   MNPDGSEEVRLTHHLARDGGPKWSPSGDRIIFSSDRDGAPGDWDLYLMDADGSNVQRV-F 59

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
            KE +   P WSP G  IA++++   K  I +   DG +E  +   S    P WSP G  
Sbjct: 60  KKEVARTSPTWSPDGKQIAYSRWEQGKSFIYIASIDGKKEERIALGSQ---PAWSPDGTE 116

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNET---LINTPAYASDPQWVG 444
           + F      D   ++  +D+  R          PA+     W  
Sbjct: 117 IAFIEGAPRDP-KRISMLDVRMRKHKFFFPPKEPAWVRHHAWSP 159



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 88/212 (41%), Gaps = 19/212 (8%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM---DIYSVDLQSNATERLTNTLFI 303
                R+ +  +    P++S +G R + S  +D A    D+Y +D   +  +R+      
Sbjct: 5   GSEEVRLTHHLARDGGPKWSPSGDRIIFSSDRDGAPGDWDLYLMDADGSNVQRVFKKEVA 64

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SPD  QI +    +GK  +Y+   +G  ++RI+   +     P WSP G  IAF
Sbjct: 65  RTSPTWSPDGKQIAYSRWEQGKSFIYIASIDGKKEERIALGSQ-----PAWSPDGTEIAF 119

Query: 364 TKFSGEKF-AIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRK-----KDGDT 414
            + +      I ++     + +      E + ++   WSP G  L F+       +  D 
Sbjct: 120 IEGAPRDPKRISMLDVRMRKHKFFFPPKEPAWVRHHAWSPEGDRLAFAWYNRIELRQEDF 179

Query: 415 GSK-LYSIDLNGRNETLINTPA-YASDPQWVG 444
             + +Y ++ +G     I      A +P W  
Sbjct: 180 KLETIYIVNRDGTGLQQIIEEGKRAVEPVWSP 211



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 102/260 (39%), Gaps = 28/260 (10%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           ++ H ++ D      G K   +   +  S           L +MD DG+N++ +   ++ 
Sbjct: 10  RLTHHLARD-----GGPKWSPSGDRIIFSSDRDGAPGDWDLYLMDADGSNVQRVFK-KEV 63

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
               P +SP+ +++AY+ ++      +Y+      +  +RI     +   P +S +G   
Sbjct: 64  ARTSPTWSPDGKQIAYSRWEQGKSF-IYIASID-GKKEERIA----LGSQPAWSPDGTEI 117

Query: 273 LISVQKDEAMDIYSV-DLQSNATERL--TNTLFINISASYSPDSSQIVFESDRE------ 323
                        S+ D++    +              ++SP+  ++ F           
Sbjct: 118 AFIEGAPRDPKRISMLDVRMRKHKFFFPPKEPAWVRHHAWSPEGDRLAFAWYNRIELRQE 177

Query: 324 --GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDG 380
               E +Y++  +G+  ++I ++ + +  +PVWSP+GD + +++        I  +  DG
Sbjct: 178 DFKLETIYIVNRDGTGLQQIIEEGKRAV-EPVWSPRGDALLYSQLDKNDMQQIFKVTLDG 236

Query: 381 SQERLLVEDSNLQAPTWSPS 400
            +   L   S    P ++  
Sbjct: 237 GEPVQLSNPS---FPNFARD 253



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 85/243 (34%), Gaps = 23/243 (9%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII- 189
           W     + I       +P  W            Q +  ++    S         ++    
Sbjct: 23  WSPSGDRIIFSSDRDGAPGDWDLYLMDADGSNVQRVFKKEVARTSPTWSPDGKQIAYSRW 82

Query: 190 ---KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              K+ + +   DG     +         +P +SP+  ++A+      D  R+ ++D R+
Sbjct: 83  EQGKSFIYIASIDGKKEERIALGS-----QPAWSPDGTEIAFIEGAPRDPKRISMLDVRM 137

Query: 247 DRAP-KRIGNFRSMILAPRFSSNGKRALISV-------QKDEAMD-IYSVDLQSNATERL 297
            +          + +    +S  G R   +        Q+D  ++ IY V+      +++
Sbjct: 138 RKHKFFFPPKEPAWVRHHAWSPEGDRLAFAWYNRIELRQEDFKLETIYIVNRDGTGLQQI 197

Query: 298 TNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEAS----YFDP 352
                  +   +SP    +++   D+   +Q++ +  +G +  ++S     +    +FDP
Sbjct: 198 IEEGKRAVEPVWSPRGDALLYSQLDKNDMQQIFKVTLDGGEPVQLSNPSFPNFARDWFDP 257

Query: 353 VWS 355
            ++
Sbjct: 258 AFA 260


>gi|149918086|ref|ZP_01906579.1| WD40-like Beta Propeller [Plesiocystis pacifica SIR-1]
 gi|149821091|gb|EDM80497.1| WD40-like Beta Propeller [Plesiocystis pacifica SIR-1]
          Length = 399

 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 104/288 (36%), Gaps = 53/288 (18%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--------- 230
           + +S    +  + +  MD +G     ++  + +      F P  +++ YA+         
Sbjct: 105 IFQSTRGDMGCDQIFTMDLEGRGTTMVSTGKGRTTCA-YFLPKDERIVYASTHAAADDCL 163

Query: 231 ----------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
                     +   D   +Y+ +      PK +            S  G   + +  +D 
Sbjct: 164 PPPDRSKGYVWKLYDEFDIYVANAD-GSDPKVLAASPGYDAEATVSPAGDTIVFTSTRDG 222

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-------------- 326
             ++Y +D+      RLTN    +  A +S D  +I++ ++R                  
Sbjct: 223 DPELYVMDIDGQNLRRLTNAPGYDGGAFFSFDGKKIIWRANRPTTADEQAKYTELREEGL 282

Query: 327 ------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVM 376
                 +L VM ++GS+Q+ I+ +  A+ F P W P G+ + F+          F + ++
Sbjct: 283 VRPTALELMVMNADGSEQRVITNNGAAN-FGPFWHPDGERVIFSSNLADPMKRNFDLFII 341

Query: 377 K----KDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                 +G     ER+         P ++  G  L+F+  +  D   +
Sbjct: 342 DTAPQPEGQWAEPERVTFTKEFDGFPMFTRDGEQLVFASNRHHDKDGE 389



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 28/171 (16%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASY 349
            +  +LT     N  A  S    +++F+S R   G +Q++ M   G     +S  K    
Sbjct: 81  TSLRQLTFG-GENAEAYLSFAEDRLIFQSTRGDMGCDQIFTMDLEGRGTTMVSTGK-GRT 138

Query: 350 FDPVWSPQGDLIAFTKFS--------------------GEKFAIGVMKKDGSQERLLV-E 388
               + P+ + I +                         ++F I V   DGS  ++L   
Sbjct: 139 TCAYFLPKDERIVYASTHAAADDCLPPPDRSKGYVWKLYDEFDIYVANADGSDPKVLAAS 198

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYAS 438
                  T SP+G +++F+  +DGD   +LY +D++G+N   L N P Y  
Sbjct: 199 PGYDAEATVSPAGDTIVFTSTRDGD--PELYVMDIDGQNLRRLTNAPGYDG 247


>gi|149919246|ref|ZP_01907729.1| WD40-like Beta Propeller protein [Plesiocystis pacifica SIR-1]
 gi|149819960|gb|EDM79382.1| WD40-like Beta Propeller protein [Plesiocystis pacifica SIR-1]
          Length = 1034

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 9/171 (5%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSM------ILAPRFSSNG 269
           P  SP+ + VA+   D       +L +DT   R  + +G  R           P +  +G
Sbjct: 437 PDVSPDGRTVAFVRNDSGQSRIAFLALDTLEVRELEPLGTGRGSGVELQQAYDPDWHPSG 496

Query: 270 KRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +   S  +D    DIY  DL++  TER+T     + S  +SPD   ++F SDR G   L
Sbjct: 497 TKVAYSAWRDGGWRDIYVHDLETQTTERITADRAQDNSPEWSPDGRWLLFSSDRSGVFNL 556

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           Y   +     +++S     + F+P  S  G+ IA+  +S   + +  M  D
Sbjct: 557 YAFDTESGQTRQVSNVLGGA-FEPAISHDGERIAYVGYSSTGYDLWAMDFD 606



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 96/304 (31%), Gaps = 26/304 (8%)

Query: 141 GKKFFSSPASWRKIAHT-----ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           G++   + ++    AHT       DD +     + G    R   +      G        
Sbjct: 309 GRRLTFTASAGSSGAHTRFPVWSPDDQHIYFFDDDGH---RQAGIRRISAEGTRIREGLA 365

Query: 196 MDRDGANIRYLTPSRDQILFEPRF-SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI- 253
           +   G +         +    P F  PN+ ++ +      D    +    R     +R  
Sbjct: 366 IGNQGKSPDIERVIDMEDNSRPSFVGPNEDQIIFDMVGVHDQRYRWSDLYRWKGPSRRGR 425

Query: 254 --GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS---NATERLTNTLFINIS-- 306
               F     AP  S +G+             I  + L +      E L       +   
Sbjct: 426 EQLTFGMRARAPDVSPDGRTVAFVRNDSGQSRIAFLALDTLEVRELEPLGTGRGSGVELQ 485

Query: 307 ----ASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 + P  +++ + + R+G  + +YV        +RI+ D+ A    P WSP G  +
Sbjct: 486 QAYDPDWHPSGTKVAYSAWRDGGWRDIYVHDLETQTTERITADR-AQDNSPEWSPDGRWL 544

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            F+      F +     +  Q R +         P  S  G  + +       TG  L++
Sbjct: 545 LFSSDRSGVFNLYAFDTESGQTRQVSNVLGGAFEPAISHDGERIAYVGYSS--TGYDLWA 602

Query: 421 IDLN 424
           +D +
Sbjct: 603 MDFD 606


>gi|312131782|ref|YP_003999122.1| peptidase s41 [Leadbetterella byssophila DSM 17132]
 gi|311908328|gb|ADQ18769.1| peptidase S41 [Leadbetterella byssophila DSM 17132]
          Length = 1064

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 73/200 (36%), Gaps = 28/200 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G   + + + D    +Y V        +LT     +    +SPD  QI F SDR
Sbjct: 29  PAISPDGSTIVFTYKGD----LYKVPSAGGQATQLTFHEAHDYQPVWSPDGKQIAFASDR 84

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-----------KF 371
            G   L++M + G +  R++           ++P G  + F     +           + 
Sbjct: 85  YGNFDLFIMNAQGGEATRLTYHSN-DEIPFSFTPDGKSVVFGGVRQDLPEHRQYPTASQP 143

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT----------GSKLYSI 421
            +  +   G +   ++     +   +S  G++LI+  KK G+              +++ 
Sbjct: 144 ELYSVPVKGGRVNQILSVP-AEYARFSKDGKTLIYHDKKGGENEWRKYHKSSITRDIWTY 202

Query: 422 DL-NGRNETLINTPAYASDP 440
           D   G++  + N       P
Sbjct: 203 DTQTGKHTKITNFYGEDRQP 222



 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 70/227 (30%), Gaps = 33/227 (14%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
               P  SP+   + +      D+ +V            ++    +    P +S +GK+ 
Sbjct: 25  WARYPAISPDGSTIVFTY--KGDLYKV----PSAGGQATQLTFHEAHDYQPVWSPDGKQI 78

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--------- 323
             +  +    D++ ++ Q     RLT      I  S++PD   +VF   R+         
Sbjct: 79  AFASDRYGNFDLFIMNAQGGEATRLTYHSNDEIPFSFTPDGKSVVFGGVRQDLPEHRQYP 138

Query: 324 --GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK----------- 370
              + +LY +   G    +I            +S  G  + +    G +           
Sbjct: 139 TASQPELYSVPVKGGRVNQILSVP---AEYARFSKDGKTLIYHDKKGGENEWRKYHKSSI 195

Query: 371 -FAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTG 415
              I        +   +       + P ++   + + +  ++ G   
Sbjct: 196 TRDIWTYDTQTGKHTKITNFYGEDRQPIFTNGDKDIYYLSEESGTFN 242



 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 64/328 (19%), Positives = 121/328 (36%), Gaps = 42/328 (12%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +D +  K      F+      R+   T  D     ++ E G FN  I   S +  S    
Sbjct: 202 YDTQTGKHTKITNFYGED---RQPIFTNGDKDIYYLSEESGTFN--IFKTSLADPSKKT- 255

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL-MDTRIDRA 249
               +       +R+L+ S   +L    FS + +   Y   + E   +V + + T+    
Sbjct: 256 ---AITKLKTHPVRFLSSSNSGLL---AFSYDGE--IYTVKEGESPKKVNITIYTQEISN 307

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              +      +     S NGK      +     +++   +    T+RLTN+        +
Sbjct: 308 KDGVSPVNGGVSDFSISPNGKEVAFIARG----EVFVGSVDGKITKRLTNSPEQERFVQF 363

Query: 310 SPDSSQIVFESDREGKEQLYV-----------MQSNGSDQKRISQDKEASYFDPVWSPQG 358
           SPD   I++ S+R+G+ Q++              S   ++K +  +K  +Y  P  SP G
Sbjct: 364 SPDGKSIIYASERDGRWQIFQTQKLRKEEPLFYASTLIEEKALVSNKNDNYI-PKISPDG 422

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKD 411
             +AF +       + VM    S+   L+    L           WSP  + L+ +  K 
Sbjct: 423 KKLAFIENRRT---LKVMDLASSKTVTLLTPEQLYHMRDGDQYFEWSPDSKWLL-ASYKP 478

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASD 439
             +  ++  +D  G+   +  T +  +D
Sbjct: 479 TMSNGEIVILDAEGKKPMVNITQSGYND 506



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 77/219 (35%), Gaps = 38/219 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN ++VA+    +        + +   +  KR+ N        +FS +GK  + + +
Sbjct: 322 SISPNGKEVAFIARGE------VFVGSVDGKITKRLTNSPEQERFVQFSPDGKSIIYASE 375

Query: 278 KDEAMDIYSVDLQSNATER---------------LTNTLFINISASYSPDSSQIVFESDR 322
           +D    I+    Q+    +               L +    N     SPD  ++ F  +R
Sbjct: 376 RDGRWQIF----QTQKLRKEEPLFYASTLIEEKALVSNKNDNYIPKISPDGKKLAFIENR 431

Query: 323 EGKEQLYVMQSNGSD------QKRISQDKEASYFDPVWSPQGDLI-AFTKFSGEKFAIGV 375
                L VM    S        +++   ++   +   WSP    + A  K +     I +
Sbjct: 432 ---RTLKVMDLASSKTVTLLTPEQLYHMRDGDQYFE-WSPDSKWLLASYKPTMSNGEIVI 487

Query: 376 MKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           +  +G +    +     N     W+  G+ +++   + G
Sbjct: 488 LDAEGKKPMVNITQSGYNDYNAKWANGGKQILWFSNRHG 526



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 84/258 (32%), Gaps = 32/258 (12%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED---- 235
                     +  L  +   G  +  +           RFS + + + Y      +    
Sbjct: 132 PEHRQYPTASQPELYSVPVKGGRVNQIL---SVPAEYARFSKDGKTLIYHDKKGGENEWR 188

Query: 236 -------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                     ++  DT+  +  K I NF      P F++  K      ++    +I+   
Sbjct: 189 KYHKSSITRDIWTYDTQTGKHTK-ITNFYGEDRQPIFTNGDKDIYYLSEESGTFNIFKTS 247

Query: 289 LQS-NATERLTNTLFINISASYSPDSSQIVFESD------REG----KEQLYVMQSNGSD 337
           L   +    +T      +    S +S  + F  D      +EG    K  + +     S+
Sbjct: 248 LADPSKKTAITKLKTHPVRFLSSSNSGLLAFSYDGEIYTVKEGESPKKVNITIYTQEISN 307

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APT 396
           +  +S        D   SP G  +AF         + V   DG   + L      +    
Sbjct: 308 KDGVSPV-NGGVSDFSISPNGKEVAFIARG----EVFVGSVDGKITKRLTNSPEQERFVQ 362

Query: 397 WSPSGRSLIFSRKKDGDT 414
           +SP G+S+I++ ++DG  
Sbjct: 363 FSPDGKSIIYASERDGRW 380



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 93/249 (37%), Gaps = 19/249 (7%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           S     + P+ SP+ +K+A+        ++ +    T     P+++ + R       +S 
Sbjct: 408 SNKNDNYIPKISPDGKKLAFIENRRTLKVMDLASSKTVTLLTPEQLYHMRDGDQYFEWSP 467

Query: 268 NGKRALISVQKDE-AMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGK 325
           + K  L S +      +I  +D +       +T + + + +A ++    QI++ S+R G 
Sbjct: 468 DSKWLLASYKPTMSNGEIVILDAEGKKPMVNITQSGYNDYNAKWANGGKQILWFSNRHGM 527

Query: 326 EQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQ-----GDLIAFTKFSGEKFAIG--VMK 377
           +      S GS     +    +  +     S        ++    K + +   +   V+ 
Sbjct: 528 KD--HANSGGSQADVYTLFLTKEGWEKFNLSKDEVALLKEMEPTKKDTAKTKEVAPIVID 585

Query: 378 KDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL-INT 433
            DG    + RL +  S+L     S  G  L +  +   +  + L+S DL  +   + I  
Sbjct: 586 WDGLTDRKARLTIHSSSLSDAILSKDGEKLYYLAR--FEKNANLWSTDLRTKETKMEIPL 643

Query: 434 PAYASDPQW 442
                  +W
Sbjct: 644 DGMGGSLEW 652


>gi|270158757|ref|ZP_06187414.1| dipeptidyl peptidase domain protein [Legionella longbeachae D-4968]
 gi|289166441|ref|YP_003456579.1| prolyl oligopeptidase [Legionella longbeachae NSW150]
 gi|269990782|gb|EEZ97036.1| dipeptidyl peptidase domain protein [Legionella longbeachae D-4968]
 gi|288859614|emb|CBJ13584.1| putative prolyl oligopeptidase [Legionella longbeachae NSW150]
          Length = 664

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 107/312 (34%), Gaps = 51/312 (16%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +  V E         ++ ++  DG   + LT S+    + P++SP+ Q +A+ +   +D 
Sbjct: 54  VYSVEEGKSKTQGIKNIWLVSYDGTIAKQLTYSKKNSNYLPKWSPDGQWIAFLSESGDDK 113

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------------------- 277
             +  + ++      R+ N    +    ++ + K  +                       
Sbjct: 114 TPILKLFSKQSGKVIRLTNPHYEVSDFVWAPDSKNIVFIASTAKDESQSENEPLVITRYV 173

Query: 278 ---------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES------DR 322
                      +   +Y + +Q    E LT+  +   + ++SP+   I F +      DR
Sbjct: 174 FKKDEEGYLGSDRSHLYRISIQKKKVELLTSGPYDEWAPAWSPNGKYIAFVTKRGKDPDR 233

Query: 323 EGKEQLY-VMQSNGSDQKRISQDKEAS-----YFDPVWSPQGDLIAFTKFSGEKF----- 371
                +Y +  ++GS   +++              P WS     IA+ + +  +      
Sbjct: 234 NFNSDIYLISPASGSKAIQLTHFPGTDLDQEWDSVPSWSSDNSQIAYIRSANSQAMYYDY 293

Query: 372 ---AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               + V+     QER++   D     P WS  G+ +    +        L ++D++   
Sbjct: 294 APTQLAVVDVATGQERVVGPVDQWFTDPQWSEDGKIIYVLMETS--RNIHLSAVDVHTGK 351

Query: 428 ETLINTPAYASD 439
              +   +   +
Sbjct: 352 VQRLTQGSRVDE 363



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/289 (19%), Positives = 102/289 (35%), Gaps = 56/289 (19%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           R + + EP  S N   V Y+  + +     I  ++L+      A +   + ++    P++
Sbjct: 37  RIKTISEPDLSKNGDWVVYSVEEGKSKTQGIKNIWLVSYDGTIAKQLTYSKKNSNYLPKW 96

Query: 266 SSNGKRALI-SVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFES--- 320
           S +G+     S   D+   I  +   QS    RLTN  +      ++PDS  IVF +   
Sbjct: 97  SPDGQWIAFLSESGDDKTPILKLFSKQSGKVIRLTNPHYEVSDFVWAPDSKNIVFIASTA 156

Query: 321 --------------------DREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                               D EG     +  LY +       + ++       + P WS
Sbjct: 157 KDESQSENEPLVITRYVFKKDEEGYLGSDRSHLYRISIQKKKVELLTS-GPYDEWAPAWS 215

Query: 356 PQGDLIAFTKFSGE------KFAIGVMKK-DGSQERLLV-------EDSNLQAPTWSPSG 401
           P G  IAF    G+         I ++    GS+   L        +      P+WS   
Sbjct: 216 PNGKYIAFVTKRGKDPDRNFNSDIYLISPASGSKAIQLTHFPGTDLDQEWDSVPSWSSDN 275

Query: 402 RSLIFSRKKDGDTG------SKLYSIDLNGRNETLI-NTPAYASDPQWV 443
             + + R  +          ++L  +D+    E ++     + +DPQW 
Sbjct: 276 SQIAYIRSANSQAMYYDYAPTQLAVVDVATGQERVVGPVDQWFTDPQWS 324



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 35/174 (20%)

Query: 306 SASYSPDSSQIVFE-----SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               S +   +V+      S  +G + ++++  +G+  K+++  K+ S + P WSP G  
Sbjct: 43  EPDLSKNGDWVVYSVEEGKSKTQGIKNIWLVSYDGTIAKQLTYSKKNSNYLPKWSPDGQW 102

Query: 361 IAFTKFSGEKFAIGV---MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD------ 411
           IAF   SG+     +    K+ G   RL      +    W+P  ++++F           
Sbjct: 103 IAFLSESGDDKTPILKLFSKQSGKVIRLTNPHYEVSDFVWAPDSKNIVFIASTAKDESQS 162

Query: 412 --------------------GDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
                               G   S LY I +  +  E L + P     P W  
Sbjct: 163 ENEPLVITRYVFKKDEEGYLGSDRSHLYRISIQKKKVELLTSGPYDEWAPAWSP 216



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 94/278 (33%), Gaps = 36/278 (12%)

Query: 176 RILFVSESVVSGIIKNS---LCVMDRDGANIRYLTPSRD-----QILFEPRFSPNQQKVA 227
            I FV++         +     +    G+    LT         +    P +S +  ++A
Sbjct: 220 YIAFVTKRGKDPDRNFNSDIYLISPASGSKAIQLTHFPGTDLDQEWDSVPSWSSDNSQIA 279

Query: 228 YATYDDEDILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           Y    +   +      T+           + +G        P++S +GK   + ++    
Sbjct: 280 YIRSANSQAMYYDYAPTQLAVVDVATGQERVVGPVDQWFTDPQWSEDGKIIYVLMETSRN 339

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + + +VD+ +   +RLT    ++   S +P    ++  SD +   +L+ ++ NG   +++
Sbjct: 340 IHLSAVDVHTGKVQRLTQGSRVDEYFSVAP-QKIVLVSSDDQHPSELFALEKNG--LRQL 396

Query: 342 SQDKEASYFDPVWSP---------QGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLV 387
           +   +    +  + P          G  I         +      +G++   G       
Sbjct: 397 THHNQKLLEEVHFVPVEDIEFDSFDGTRIEGLLVKPANYKPGNRYLGILNLHGGPVDQFT 456

Query: 388 EDSNLQAPTWSPSGRSLIF-----SRKKDGDTGSKLYS 420
            + N +    +  G  +I      S  +  +    +Y+
Sbjct: 457 HEFNFEWQWLAAQGYVVIAPNPRGSSGRGFNFAKAIYA 494



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 26/67 (38%), Gaps = 11/67 (16%)

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTG---SKLYSIDLNGRNETLIN--------TPAYASD 439
            +  P  S +G  +++S ++          ++ +  +G     +          P ++ D
Sbjct: 40  TISEPDLSKNGDWVVYSVEEGKSKTQGIKNIWLVSYDGTIAKQLTYSKKNSNYLPKWSPD 99

Query: 440 PQWVGFM 446
            QW+ F+
Sbjct: 100 GQWIAFL 106


>gi|322436470|ref|YP_004218682.1| peptidase S41 [Acidobacterium sp. MP5ACTX9]
 gi|321164197|gb|ADW69902.1| peptidase S41 [Acidobacterium sp. MP5ACTX9]
          Length = 1087

 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/248 (20%), Positives = 92/248 (37%), Gaps = 38/248 (15%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             L +P  SP+  ++A+ +    DI  V             +    +    P +S +GK+
Sbjct: 23  PSLSDPTISPDGHEIAFVS--GGDIWSV----PAAGGEAHLLVTHPATESRPLYSPDGKK 76

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGKEQL 328
                 +    +IY + L S   +RLT +   +   ++S D   I F S   D  G+  +
Sbjct: 77  LAFISTRTGNGNIYILTLASGQLQRLTYSDVPDRLDAWSKDGQWIYFTSAIDDVAGQGDI 136

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--------FSGEKFAI-----GV 375
           + +++ G     ++ ++  + F+   SP G  IAF          +      I      +
Sbjct: 137 FRVRTTGGTPLEVTHERYMNEFESSPSPDGSQIAFMAKGISASQWWRNGHAHIDETELWL 196

Query: 376 MKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                S    +LL  DS    P WS  G+SL +     G               E +  T
Sbjct: 197 KPVGDSAPYKKLLPADSKHAWPMWSADGKSLFYMSDASGA--------------ENIWET 242

Query: 434 PAYASDPQ 441
           PA ++ P+
Sbjct: 243 PAGSASPK 250



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 69/208 (33%), Gaps = 27/208 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           R  +  P  S +G             DI+SV         L           YSPD  ++
Sbjct: 22  RPSLSDPTISPDGHEIAFVS----GGDIWSVPAAGGEAHLLVTHPATESRPLYSPDGKKL 77

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---EKFAI 373
            F S R G   +Y++       +R++   +       WS  G  I FT        +  I
Sbjct: 78  AFISTRTGNGNIYILTLASGQLQRLTY-SDVPDRLDAWSKDGQWIYFTSAIDDVAGQGDI 136

Query: 374 GVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRK--------KDGDT---GSKL 418
             ++  G     +  +  +     +P  SP G  + F  K        ++G      ++L
Sbjct: 137 FRVRTTGGTPLEVTHERYMNEFESSP--SPDGSQIAFMAKGISASQWWRNGHAHIDETEL 194

Query: 419 YS--IDLNGRNETLINTPAYASDPQWVG 444
           +   +  +   + L+   +  + P W  
Sbjct: 195 WLKPVGDSAPYKKLLPADSKHAWPMWSA 222



 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 104/294 (35%), Gaps = 26/294 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + + ++ + ++     +  +  +   G     +T  R    FE   SP+  ++A+     
Sbjct: 117 DGQWIYFTSAIDDVAGQGDIFRVRTTGGTPLEVTHERYMNEFESSPSPDGSQIAFMAKGI 176

Query: 234 E------------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
                        D   ++L         K++    S    P +S++GK          A
Sbjct: 177 SASQWWRNGHAHIDETELWLKPVGDSAPYKKLLPADSKHAWPMWSADGKSLFYMSDASGA 236

Query: 282 MDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESD--------REGKEQLYVMQ 332
            +I+     S + + LT+      +  S       IVFE +          GK +   ++
Sbjct: 237 ENIWETPAGSASPKALTHFKEGRVLWPSIGDSGHTIVFERNFAIWRMDTASGKAEPVRIE 296

Query: 333 SNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             GS     I++  E S+     SP G  +     +  +      K  G  +R+  E  +
Sbjct: 297 LRGSAGTPGITRVTETSFRTLALSPDGKKVVV--LAHGQLFAASAKDGGDGQRVKSEAVS 354

Query: 392 LQAPTWSPSGRSLIFSRKK-DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +  P WSP   S+ +  ++ DG    +L+S D   +   L   P  +  P W  
Sbjct: 355 MSDPQWSPDSTSVAYIAERMDGSHQLELFSFDTL-KARPLTIIPGESQAPSWSP 407



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 13/191 (6%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG + + +  S    + +P++SP+   VAY     +   ++ L      +A + +     
Sbjct: 341 DGGDGQRV-KSEAVSMSDPQWSPDSTSVAYIAERMDGSHQLELFSFDTLKA-RPLTIIPG 398

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-------ERLTNTLFINISASYSP 311
              AP +S NGK         +   I   D ++ A        + +T+      S ++SP
Sbjct: 399 ESQAPSWSPNGKLLAYVHDNKDLHVITMPDPKAKAPSTVPLPDKIITSGALAQPSLAWSP 458

Query: 312 DSSQIVFES-DREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAF-TKFS 367
           D+  + F S D      L V+Q+ G +   I+   + E +Y    WSP G  I F T   
Sbjct: 459 DNQWVAFTSVDARSFRNLNVIQAAGGEPHPITFLGNGETAYSRIAWSPDGKYILFETAQR 518

Query: 368 GEKFAIGVMKK 378
            E   I  +  
Sbjct: 519 SENIQIARVDL 529



 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 80/221 (36%), Gaps = 24/221 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +KV    +      +++    +     +R+ +    +  P++S +        +
Sbjct: 318 ALSPDGKKVVVLAHG-----QLFAASAKDGGDGQRVKSEAVSMSDPQWSPDSTSVAYIAE 372

Query: 278 K-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           + D +  +      +     LT     + + S+SP+   + +  D    + L+V+     
Sbjct: 373 RMDGSHQLELFSFDTLKARPLTIIPGESQAPSWSPNGKLLAYVHD---NKDLHVITMPDP 429

Query: 337 DQKRISQD-------KEASYFDP--VWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLL 386
             K  S            +   P   WSP    +AFT      F  + V++  G +   +
Sbjct: 430 KAKAPSTVPLPDKIITSGALAQPSLAWSPDNQWVAFTSVDARSFRNLNVIQAAGGEPHPI 489

Query: 387 VEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               N +       WSP G+ ++F   +  +   ++  +DL
Sbjct: 490 TFLGNGETAYSRIAWSPDGKYILFETAQRSE-NIQIARVDL 529



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 93/270 (34%), Gaps = 30/270 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  +   G     L          P +SP+ +K+A+ +    +   +Y++     +  +
Sbjct: 44  DIWSVPAAGGEAHLLVT-HPATESRPLYSPDGKKLAFISTRTGNG-NIYILTLASGQL-Q 100

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTNTLF-INISA 307
           R+           +S +G+    +   D      DI+ V         +T+  +     +
Sbjct: 101 RLTYSDVPDRLDAWSKDGQWIYFTSAIDDVAGQGDIFRVRTTGGTPLEVTHERYMNEFES 160

Query: 308 SYSPDSSQIVF--------ESDREGKEQL-----YVMQSNGSDQKRISQDKEASYFDPVW 354
           S SPD SQI F        +  R G   +     ++     S   +     ++ +  P+W
Sbjct: 161 SPSPDGSQIAFMAKGISASQWWRNGHAHIDETELWLKPVGDSAPYKKLLPADSKHAWPMW 220

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDG 412
           S  G  + +   +     I       +  + L    +  +  P+   SG +++F R    
Sbjct: 221 SADGKSLFYMSDASGAENIWETPAGSASPKALTHFKEGRVLWPSIGDSGHTIVFERN--- 277

Query: 413 DTGSKLYSID-LNGRNET-LINTPAYASDP 440
                ++ +D  +G+ E   I     A  P
Sbjct: 278 ---FAIWRMDTASGKAEPVRIELRGSAGTP 304



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 57/355 (16%), Positives = 107/355 (30%), Gaps = 54/355 (15%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V    Q+            R  +  +S      ++  +   +S  +      + G  +  
Sbjct: 328 VLAHGQLFAASAKDGGDGQRVKSEAVS------MSDPQWSPDSTSVAYIAERMDGSHQLE 381

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-- 250
           L   D   A    + P   Q    P +SPN + +AY  +D++D+  + + D +       
Sbjct: 382 LFSFDTLKARPLTIIPGESQA---PSWSPNGKLLAYV-HDNKDLHVITMPDPKAKAPSTV 437

Query: 251 ----KRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLT---NTLF 302
               K I +      +  +S + +     SV      ++  +         +T   N   
Sbjct: 438 PLPDKIITSGALAQPSLAWSPDNQWVAFTSVDARSFRNLNVIQAAGGEPHPITFLGNGET 497

Query: 303 INISASYSPDSSQIVF-ESDREGKEQLYVMQS----------NGSDQKRISQDKEASYFD 351
                ++SPD   I+F  + R    Q+  +               D  R ++        
Sbjct: 498 AYSRIAWSPDGKYILFETAQRSENIQIARVDLLPHVPRFREDEFRDLFRTTRPPGTPATP 557

Query: 352 PVW-----------------SPQG-DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                               +P      A  K   E   I V +    +  +L    + +
Sbjct: 558 ATPTTPAETPASEPKADATDTPDKPKPAAPEKKQPEPVKI-VFEGIRRRLTILPLGLSAE 616

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN----ETLINTPAYASDPQWVG 444
            P  SP G+ L+FS +         YS+D   R       L +TP       +  
Sbjct: 617 RPVISPDGKVLLFSAETARQESLYTYSLDELAREPAVARQLTSTPGSKGAYAFSP 671



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 14/106 (13%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIF 406
           S  DP  SP G  IAF         I  +   G +  LL    +    P +SP G+ L F
Sbjct: 24  SLSDPTISPDGHEIAFVSGGD----IWSVPAAGGEAHLLVTHPATESRPLYSPDGKKLAF 79

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
              + G     +Y + L       +          A++ D QW+ F
Sbjct: 80  ISTRTG--NGNIYILTLASGQLQRLTYSDVPDRLDAWSKDGQWIYF 123



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 83/254 (32%), Gaps = 29/254 (11%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--FSPN 222
           ++      ++    +V+ + V      +L V+   G     +T   +      R  +SP+
Sbjct: 448 ALAQPSLAWSPDNQWVAFTSVDARSFRNLNVIQAAGGEPHPITFLGNGETAYSRIAWSPD 507

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + + + T    + +++  +D                   PRF  +  R L    +    
Sbjct: 508 GKYILFETAQRSENIQIARVDLLPHV--------------PRFREDEFRDLFRTTRPPGT 553

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   + A    +           +PD  +    +  + + +   +   G  ++R++
Sbjct: 554 PATPATPTTPAETPASEPKADATD---TPDKPKPA--APEKKQPEPVKIVFEG-IRRRLT 607

Query: 343 QDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-----SQERLLVED-SNLQAP 395
                 S   PV SP G ++ F+  +  + ++     D      +  R L     +  A 
Sbjct: 608 ILPLGLSAERPVISPDGKVLLFSAETARQESLYTYSLDELAREPAVARQLTSTPGSKGAY 667

Query: 396 TWSPSGRSLIFSRK 409
            +SP  + + F   
Sbjct: 668 AFSPDSKEVFFLEN 681


>gi|150007868|ref|YP_001302611.1| putative peptidase/protease family protein [Parabacteroides
           distasonis ATCC 8503]
 gi|149936292|gb|ABR42989.1| putative peptidase/protease family protein [Parabacteroides
           distasonis ATCC 8503]
          Length = 1080

 Score =  123 bits (310), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 61/337 (18%), Positives = 122/337 (36%), Gaps = 41/337 (12%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  ++D +  K              R    T        ++   G   +   F   +  S
Sbjct: 196 DIWMYDTQTGKH---TNLTDHAGEDRNAVFTPDGQTVYFLSERNGGSFNVYSFPLNTPQS 252

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                   V       +R+L+   DQ L    ++ + +   Y      +  +V +   R 
Sbjct: 253 IT-----AVTKFKTHPVRFLSTGSDQTLC---YTYDGE--IYTQRPGSNPQKVRIDLIRD 302

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D+      N      +   S +GK+  ++++     +++      N T+++T+T      
Sbjct: 303 DQEQICDLNSSKGATSATVSPDGKQIALTLRG----EVFVTSADYNTTKQITHTPAAETG 358

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPVWS 355
             +SPD+  + + S+R G  QLY+ +               +++ +   K      P +S
Sbjct: 359 VCFSPDNRTLAYASERGGNWQLYLAKIARKEEANFPNATIIEEEVLLPSKTVERNYPQFS 418

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFS 407
           P G  +AF +   ++  + V+  +  + R + + S   +       +WSP G+   L F 
Sbjct: 419 PDGKELAFIE---DRMRLMVVNLETKKVRQVTDGSTWYSTAGGFDYSWSPDGKWFTLRFI 475

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQWV 443
             K  D  S +  +   G   T +    Y S  PQWV
Sbjct: 476 GNKH-DPYSDIGLVSAQGGEITNLTNSGYTSTSPQWV 511



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 85/246 (34%), Gaps = 35/246 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S    P +S +GK+   +  +
Sbjct: 29  ISPDGTEIAFCY--KGDIYKV----PAKGGTATQLTTQASYECTPIWSPDGKQIAFASDR 82

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
           +   D++ +       + LT      I ++++PD   ++F +                 +
Sbjct: 83  NGNFDLFVMPSNGGTAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTE 142

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +   G   +++     A       S  G    +               S     I +
Sbjct: 143 LYKVPVGGGRTEQVL-GTPAEMVCFDKS--GKTFLYQDRKGFEDEWRKHHTSSVTRDIWM 199

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                 +   L +     +   ++P G+++ F  +++G +   +YS  LN   +++    
Sbjct: 200 YDTQTGKHTNLTDHAGEDRNAVFTPDGQTVYFLSERNGGS-FNVYSFPLN-TPQSITAVT 257

Query: 435 AYASDP 440
            + + P
Sbjct: 258 KFKTHP 263



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 74/215 (34%), Gaps = 34/215 (15%)

Query: 258 SMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           S  + P +      S +G       + D    IY V  +     +LT       +  +SP
Sbjct: 16  SYAVTPLWMRDVQISPDGTEIAFCYKGD----IYKVPAKGGTATQLTTQASYECTPIWSP 71

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
           D  QI F SDR G   L+VM SNG   + ++    AS     ++P G  + F+       
Sbjct: 72  DGKQIAFASDRNGNFDLFVMPSNGGTAQCLTT-HSASEIPSAFTPDGKYVLFSASIQDPA 130

Query: 367 ------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--------- 411
                 +     +  +   G +   ++     +   +  SG++ ++  +K          
Sbjct: 131 QSALFPTSAMTELYKVPVGGGRTEQVLGTP-AEMVCFDKSGKTFLYQDRKGFEDEWRKHH 189

Query: 412 -GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                  ++  D   G++  L +      +  +  
Sbjct: 190 TSSVTRDIWMYDTQTGKHTNLTDHAGEDRNAVFTP 224



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 73/217 (33%), Gaps = 32/217 (14%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +       
Sbjct: 40  YKGDIYKVPAKGGTATQLTTQAS-YECTPIWSPDGKQIAFASDRNGNFDLFVMPSN--GG 96

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-----------IYSVDLQSNATERL 297
             + +    +  +   F+ +GK  L S    +              +Y V +    TE++
Sbjct: 97  TAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTELYKVPVGGGRTEQV 156

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  +       ++ D
Sbjct: 157 LGTPAEMV--CFDKSGKTFLYQ-DRKGFEDEWRKHHTSSVTRDIWMYDTQTGKHTNLT-D 212

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDG 380
                 + V++P G  + F ++ +G  F +     + 
Sbjct: 213 HAGEDRNAVFTPDGQTVYFLSERNGGSFNVYSFPLNT 249



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 120/352 (34%), Gaps = 48/352 (13%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK   L +   ++ V        K+   +PA+   +  +  +      +   G+
Sbjct: 319 ATVSPDGKQIALTLRGEVF-VTSADYNTTKQITHTPAAETGVCFSPDNRTLAYASERGGN 377

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +   +  ++    +     ++            L PS+      P+FSP+ +++A+    
Sbjct: 378 WQLYLAKIARKEEANFPNATII-------EEEVLLPSKTVERNYPQFSPDGKELAFI--- 427

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----RFSSNGKR--ALISVQK-DEAMDI 284
            ED +R+ +++    +  +++ +  +           +S +GK         K D   DI
Sbjct: 428 -EDRMRLMVVNLET-KKVRQVTDGSTWYSTAGGFDYSWSPDGKWFTLRFIGNKHDPYSDI 485

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-----------KEQLYVMQS 333
             V  Q      LTN+ + + S  +  D + I+F ++R G              L  M  
Sbjct: 486 GLVSAQGGEITNLTNSGYTSTSPQWVLDGNAILFTTERYGMRAHASWGSLNDAMLVFMNQ 545

Query: 334 NGSDQKRISQDKE-------------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +  D+ R+S++                         +           +   + +     
Sbjct: 546 DAYDKFRLSKEDYELQKELEKEQKEVTGDKTDDKKKEDKADEKKDEMPKDIVVELKGIQD 605

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              RL    S + +   S +G +L +      +    L+ +DL  +   L++
Sbjct: 606 RILRLTPNSSEMGSAVISKNGETLYYFS--AFEDKYDLWKMDLRKKETKLLH 655


>gi|126650236|ref|ZP_01722464.1| YuxL [Bacillus sp. B14905]
 gi|126592886|gb|EAZ86868.1| YuxL [Bacillus sp. B14905]
          Length = 662

 Score =  123 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 93/255 (36%), Gaps = 54/255 (21%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATE 295
           M T+    P+ + + +S +  P+ S +G   +    +      D   +++ ++L+    +
Sbjct: 1   MTTKQGIQPEDLYHLKS-VADPQLSPDGTEVVYVETRIDEKKKDYVSNLFYLNLKDKRPQ 59

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           + T       S  +SPD SQI F S R GK Q++V+   G + K+++  K  +   PVWS
Sbjct: 60  QWTYGDDRTSSPVWSPDGSQIAFSSTRSGKPQIFVLSKTGGEAKQVTYCKNGA-STPVWS 118

Query: 356 PQGDLIAFTKFSG---------------------------------EKF-------AIGV 375
           P G+ IAF+   G                                   F        I +
Sbjct: 119 PCGEKIAFSVMLGKDETILDKAEDDKKEEKELKPLEIDKMKHKSDAGGFMDMDQHTHIAI 178

Query: 376 MKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETL 430
           +       + + E + +    TWSP+G  L +   +    D    + +Y  DL  +    
Sbjct: 179 VDLKSGDLKQVTEGNEDFHLSTWSPNGSYLTYLADQAEDLDFSFNADIYLFDLETKQSRK 238

Query: 431 INTP-AYASDPQWVG 444
           +           W  
Sbjct: 239 VTEGIGSYYQTSWSP 253



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 90/263 (34%), Gaps = 55/263 (20%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNG 269
           + +P+ SP+  +V Y     ++  + Y+ +       D+ P++         +P +S +G
Sbjct: 18  VADPQLSPDGTEVVYVETRIDEKKKDYVSNLFYLNLKDKRPQQWTYGDDRTSSPVWSPDG 77

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---------- 319
            +   S  +     I+ +       +++T       +  +SP   +I F           
Sbjct: 78  SQIAFSSTRSGKPQIFVLSKTGGEAKQVTYCKNGASTPVWSPCGEKIAFSVMLGKDETIL 137

Query: 320 ------------------------SDREG------KEQLYVMQSNGSDQKRISQDKEASY 349
                                   SD  G         + ++     D K++++  E  +
Sbjct: 138 DKAEDDKKEEKELKPLEIDKMKHKSDAGGFMDMDQHTHIAIVDLKSGDLKQVTEGNE-DF 196

Query: 350 FDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGR 402
               WSP G  + +     E         I +   +  Q R + E   +    +WSP+ R
Sbjct: 197 HLSTWSPNGSYLTYLADQAEDLDFSFNADIYLFDLETKQSRKVTEGIGSYYQTSWSPNSR 256

Query: 403 SLIFS---RKKDGDTGSKLYSID 422
            L F    R+ +  T +KL+  D
Sbjct: 257 FLSFVGGKREFENATQAKLWIYD 279



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 60/395 (15%), Positives = 117/395 (29%), Gaps = 90/395 (22%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           ++  +G + + VE R  D K +  +    + +      +      D     +    G   
Sbjct: 22  QLSPDGTEVVYVETR-IDEKKKDYVSNLFYLNLKDKRPQQWTYGDDRTSSPVWSPDG--- 77

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           S+I F S        K  + V+ + G   + +T  ++     P +SP  +K+A++     
Sbjct: 78  SQIAFSSTR----SGKPQIFVLSKTGGEAKQVTYCKNG-ASTPVWSPCGEKIAFSVMLGK 132

Query: 232 ------------------------------------DDEDILRVYLMDTRIDRAPKRIGN 255
                                               D +    + ++D +     K++  
Sbjct: 133 DETILDKAEDDKKEEKELKPLEIDKMKHKSDAGGFMDMDQHTHIAIVDLKSGDL-KQVTE 191

Query: 256 FRSMILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
                    +S NG            +      DIY  DL++  + ++T  +      S+
Sbjct: 192 GNEDFHLSTWSPNGSYLTYLADQAEDLDFSFNADIYLFDLETKQSRKVTEGIGSYYQTSW 251

Query: 310 SPDSSQIVFESDREGKEQ--------LYVMQSNGSDQKRISQDKEASYFDPV-------- 353
           SP+S    F S   GK +        L++     +     + + +A   D V        
Sbjct: 252 SPNSR---FLSFVGGKREFENATQAKLWIYDMEQNLLNCATSEFDAPVGDYVIGDFLQGV 308

Query: 354 ------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR----S 403
                 W        F        AI     DG     + +D  +    +S   +     
Sbjct: 309 AAPSVQWMNDNHSFYFQVTDHGNAAIYFGNVDGEIYPAIHDDQYVYG--FSLDAQNDQAV 366

Query: 404 LIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYA 437
           +  S   +      LY ++L  G  E L       
Sbjct: 367 VAISTTTN---PGDLYYVNLKTGEKERLTTVNEDV 398


>gi|320104802|ref|YP_004180393.1| peptidase S41 [Isosphaera pallida ATCC 43644]
 gi|319752084|gb|ADV63844.1| peptidase S41 [Isosphaera pallida ATCC 43644]
          Length = 1186

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 61/296 (20%), Positives = 128/296 (43%), Gaps = 27/296 (9%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            +DD     +   G FN   +  + + V  + +++         ++R+ + S D  +   
Sbjct: 269 FADDTLAFNSDRSGTFNLYKVDPATNEVVPLTRSTTW-------DVRWPSQSNDGRIV-- 319

Query: 218 RFSPNQQ-KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            +  +   ++   +  ++  L + + D  + R P+R+ +   +I     S  G+RAL + 
Sbjct: 320 -YEFDGTLRIVTVSSGEDRGLTIEVPDDGLTRRPERV-SAAGLIEDFGLSPKGERALFAA 377

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +     ++++V +++  T  L N+  ++  +  +SPD S I + SD  G+E+L+++  +G
Sbjct: 378 RG----EVFTVPIENGTTRALVNSSKVHAKAPIWSPDGSTIAYLSDASGEEELWLVAQDG 433

Query: 336 S-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           S   ++++    A  F P WSP G  IAF    G    + V            +    ++
Sbjct: 434 SKPPRQLTHGGRAMRFAPRWSPDGSAIAFVDKDG---KLLVADVATGNLVEAADSPEERS 490

Query: 395 P--TWSPSGRSLIFSRKK-DGDTGSKLYSIDLNGRN---ETLINTPAYASDPQWVG 444
               WSP  R L FS  + +G+    ++S D        + + +    A +P W  
Sbjct: 491 TDHVWSPDSRFLAFSLPRPNGNRALFIWSRDAENPEAALQQITDEFFDAFEPAWDP 546



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 61/266 (22%), Positives = 95/266 (35%), Gaps = 38/266 (14%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   R L PS    +  PR S  + +VA           V ++      A         M
Sbjct: 18  GTATRGLLPSATAPIPTPRVSDRRTRVA--------PTGVAILGALAALAATPALGQTRM 69

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +  P     G   + S   D    ++SV  Q     RLT    + +   +SPD S I F 
Sbjct: 70  LRYPDLH--GDTVVFSYAGD----LWSVSDQGGRATRLTAHPGLELFPKFSPDGSMIAFT 123

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDK---------EASYFDPVWSPQGDLIAFTKFSGE- 369
              +G EQ+YV+ + G   K+++               +    W+P G  I F       
Sbjct: 124 GQYDGDEQVYVIPATGGVPKQLTYYPARGPLPARWGYDHQVMGWTPDGKSILFRSLRDSW 183

Query: 370 ---KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS---------RKKDGDTGSK 417
              +  +  +   G   +LL   S+  A T+SP G  L +S         ++  G     
Sbjct: 184 TIAEGRLYTVPVGGGPAKLLPPPSS-GAATFSPDGSRLFYSPLARDFRTWKRYQGGWAQN 242

Query: 418 LYSIDLNG-RNETLINTPAYASDPQW 442
           L+ IDL     + + +T     DP W
Sbjct: 243 LFIIDLKTLERKPIAHTVRTERDPMW 268



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 85/237 (35%), Gaps = 16/237 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +V SG  +     +  DG   R    S   ++ +   SP  ++  +A   +     V+ +
Sbjct: 330 TVSSGEDRGLTIEVPDDGLTRRPERVSAAGLIEDFGLSPKGERALFAARGE-----VFTV 384

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNT- 300
                     + + +    AP +S +G             +++ V    +    +LT+  
Sbjct: 385 PIENGTTRALVNSSKVHAKAPIWSPDGSTIAYLSDASGEEELWLVAQDGSKPPRQLTHGG 444

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             +  +  +SPD S I F  D++GK  L V      +    +   E    D VWSP    
Sbjct: 445 RAMRFAPRWSPDGSAIAFV-DKDGK--LLVADVATGNLVEAADSPEERSTDHVWSPDSRF 501

Query: 361 IAFT-KFSGEKFAIGVMKKDGSQE-----RLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +AF+        A+ +  +D         ++  E  +   P W P G  L +    D
Sbjct: 502 LAFSLPRPNGNRALFIWSRDAENPEAALQQITDEFFDAFEPAWDPEGNYLYYLANHD 558



 Score = 99.7 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 80/248 (32%), Gaps = 37/248 (14%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+            D+  V    +       R+     + L P+FS +G     + Q D 
Sbjct: 73  PDLHGDTVVFSYAGDLWSV----SDQGGRATRLTAHPGLELFPKFSPDGSMIAFTGQYDG 128

Query: 281 AMDIYSVDLQSNATERLTNTLFINISAS----------YSPDSSQIVFESDREGK----E 326
              +Y +       ++LT         +          ++PD   I+F S R+       
Sbjct: 129 DEQVYVIPATGGVPKQLTYYPARGPLPARWGYDHQVMGWTPDGKSILFRSLRDSWTIAEG 188

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGV 375
           +LY +   G   K +      +     +SP G  + ++              G    + +
Sbjct: 189 RLYTVPVGGGPAKLLPPPSSGAAT---FSPDGSRLFYSPLARDFRTWKRYQGGWAQNLFI 245

Query: 376 MKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           +     + + +      +  P W     +L F+  + G     LY +D    NE +  T 
Sbjct: 246 IDLKTLERKPIAHTVRTERDPMWFAD-DTLAFNSDRSGTF--NLYKVDPA-TNEVVPLTR 301

Query: 435 AYASDPQW 442
           +   D +W
Sbjct: 302 STTWDVRW 309



 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 51/319 (15%), Positives = 108/319 (33%), Gaps = 33/319 (10%)

Query: 67  EVVSKDLQRSDVFNL--ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           + ++ +  RS  FNL  +   + +       +    + W S        GR++ E    L
Sbjct: 272 DTLAFNSDRSGTFNLYKVDPATNEVVPLTRSTTWDVR-WPSQSND----GRIVYEFDGTL 326

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           R+           +  G           +    +S           G      L      
Sbjct: 327 RIV-----TVSSGEDRGLTIEVPDDGLTRRPERVSAA---------GLIEDFGLSPKGER 372

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                +  +  +  +    R L  S       P +SP+   +AY + D      ++L+  
Sbjct: 373 ALFAARGEVFTVPIENGTTRALVNSSKVHAKAPIWSPDGSTIAYLS-DASGEEELWLVAQ 431

Query: 245 RIDRAPKRIGNF-RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-F 302
              + P+++ +  R+M  APR+S +G         D+   +   D+ +       ++   
Sbjct: 432 DGSKPPRQLTHGGRAMRFAPRWSPDGSAIAFV---DKDGKLLVADVATGNLVEAADSPEE 488

Query: 303 INISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQ----KRISQDKEASYFDPVWSPQ 357
            +    +SPDS  + F   R  G   L++   +  +     ++I+ +     F+P W P+
Sbjct: 489 RSTDHVWSPDSRFLAFSLPRPNGNRALFIWSRDAENPEAALQQITDEFF-DAFEPAWDPE 547

Query: 358 GDLIAFTKFSGEKFAIGVM 376
           G+ + +         I  +
Sbjct: 548 GNYLYYLANHDFAPQISAI 566



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 109/337 (32%), Gaps = 72/337 (21%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA------ 229
            ILF S      I +  L  +   G   + L P          FSP+  ++ Y+      
Sbjct: 173 SILFRSLRDSWTIAEGRLYTVPVGGGPAKLLPPPSSGAA---TFSPDGSRLFYSPLARDF 229

Query: 230 ----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                Y       ++++D +     K I +       P + ++      +  +    ++Y
Sbjct: 230 RTWKRYQGGWAQNLFIIDLKT-LERKPIAHTVRTERDPMWFAD-DTLAFNSDRSGTFNLY 287

Query: 286 SVDLQSNATERLTNTLFINIS-ASYSPDSS---------QIVFES---DRE--------- 323
            VD  +N    LT +   ++   S S D           +IV  S   DR          
Sbjct: 288 KVDPATNEVVPLTRSTTWDVRWPSQSNDGRIVYEFDGTLRIVTVSSGEDRGLTIEVPDDG 347

Query: 324 -----------------------------GKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                                         + +++ +       + +    +     P+W
Sbjct: 348 LTRRPERVSAAGLIEDFGLSPKGERALFAARGEVFTVPIENGTTRALVNSSKVHAKAPIW 407

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQ--APTWSPSGRSLIFSRKKD 411
           SP G  IA+   +  +  + ++ +DGS+  R L         AP WSP G ++ F  K  
Sbjct: 408 SPDGSTIAYLSDASGEEELWLVAQDGSKPPRQLTHGGRAMRFAPRWSPDGSAIAFVDKDG 467

Query: 412 GDTGSKLYS---IDLNGRNETLINTPAYASDPQWVGF 445
               + + +   ++     E       ++ D +++ F
Sbjct: 468 KLLVADVATGNLVEAADSPEERSTDHVWSPDSRFLAF 504



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 97/258 (37%), Gaps = 39/258 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G     LT     +   P+FSP+   +A+    D D  +VY++       PK
Sbjct: 87  DLWSVSDQGGRATRLTA-HPGLELFPKFSPDGSMIAFTGQYDGDE-QVYVI-PATGGVPK 143

Query: 252 RIGNFRSMILAPR----------FSSNGKRALISVQKDEAM----DIYSVDLQSNATERL 297
           ++  + +    P           ++ +GK  L    +D        +Y+V +     + L
Sbjct: 144 QLTYYPARGPLPARWGYDHQVMGWTPDGKSILFRSLRDSWTIAEGRLYTVPVGGGPAKLL 203

Query: 298 TNTLFINISASYSPDSSQIVFE-----------SDREGKEQLYVMQSNGSDQKRISQDKE 346
                   +A++SPD S++ +                  + L+++     ++K I+    
Sbjct: 204 PPPSS--GAATFSPDGSRLFYSPLARDFRTWKRYQGGWAQNLFIIDLKTLERKPIAH-TV 260

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
            +  DP+W    D +AF       F +  +    ++   L      +++ P+ S  GR +
Sbjct: 261 RTERDPMWFAD-DTLAFNSDRSGTFNLYKVDPATNEVVPLTRSTTWDVRWPSQSNDGR-I 318

Query: 405 IFSRKKDGDTGSKLYSID 422
           ++    + D   ++ ++ 
Sbjct: 319 VY----EFDGTLRIVTVS 332


>gi|169785140|ref|XP_001827031.1| hypothetical protein AOR_1_786034 [Aspergillus oryzae RIB40]
 gi|83775778|dbj|BAE65898.1| unnamed protein product [Aspergillus oryzae]
          Length = 647

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 67/362 (18%), Positives = 126/362 (34%), Gaps = 85/362 (23%)

Query: 146 SSPASWRKIAHTISD---DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           SS A+ RK  H   +   D+       +G        V      G   + L V + DG+N
Sbjct: 15  SSFATARKAMHFAMEQNLDMLPRTHSARGLPAPGKKGVMLMNRIGPSSSELYVANIDGSN 74

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R L  +  +  +   FSP+ Q + + +  + D               +++    S+  A
Sbjct: 75  ERKLLGNNSRFDYHASFSPDGQWITFTSERNGDGNSDLYRCRADGSGLEKLVATSSVEDA 134

Query: 263 PRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINIS---------ASYSPD 312
              S +  +       +    +++ +DL++     LT+   +             S+SPD
Sbjct: 135 GVLSPDASKVAWVSTANGYTTNVWVMDLKTGEQRNLTSLEGVKGDPTKPNGYFRPSWSPD 194

Query: 313 SSQIVFESDREGKEQ---------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              I F SDR  + +               +YV++ +G+D ++I+  +  S   P WSP 
Sbjct: 195 GEWIAFSSDRNTEWRGHGNGTGWEHTQELSVYVIRPDGTDFRKIASREGWSLGSPRWSPD 254

Query: 358 GDLIAFTKFSGEK--------------FAI----------GVMKKDGSQERL-------- 385
           G  I F + + E                 I           +   +G+  ++        
Sbjct: 255 GSRIIFYEITTENTWDAHRPESVASATSQIVSVDFATGLDRIQHTNGTGVKVSPQYVTAD 314

Query: 386 -----------------------LVEDSNLQAPTWSPSGRSLIF--SRKKDGDTGSKLYS 420
                                   V +  +++P+WSP G+S+++  S  +      KLYS
Sbjct: 315 NIGYLIKGGSSEGIHYTAESSTGTVINGTMRSPSWSPDGKSVVYEKSEFEARPMEKKLYS 374

Query: 421 ID 422
            D
Sbjct: 375 WD 376



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 85/233 (36%), Gaps = 25/233 (10%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------SVQ 277
             +     D  D   V+   T+ + +   +G   +    P +S +G+            +
Sbjct: 406 SSIVTMRPDGLDQKLVFDPLTQSNISSSEVGQGLAGAFQPSWSPDGEWIAFGIGAWFQSR 465

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 I       +  E LTN        SYS D   +V+      +  L +M      
Sbjct: 466 ATGKGYIARAKADGSYHEILTNGTINAGFPSYSLDGRYLVYRV-WGTEFGLRIMDLTDKS 524

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDS-NLQAP 395
            + ++  ++     P +SP G  I FT+ +    F +  ++ DGS  ++L     N    
Sbjct: 525 VRVLTTTRD---NLPFYSPDGQRIVFTRRTSYTNFDVCTIRPDGSDLKVLTSSGANDAHA 581

Query: 396 TWSPSGRSLIFSRKKDG------------DTGSKLYSIDLNGRNETLINTPAY 436
           TW+  GR ++++    G                +++ ++ +G N+T++    +
Sbjct: 582 TWTADGR-ILYASGMYGFRDEAAIYDNTFQPYGQIFVMNADGSNKTILTDSIW 633



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 52/375 (13%), Positives = 113/375 (30%), Gaps = 117/375 (31%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +      + S+ V+  DG + R +       L  PR+SP+  ++ +     E+    +  
Sbjct: 215 TGWEHTQELSVYVIRPDGTDFRKIASREGWSLGSPRWSPDGSRIIFYEITTENTWDAHRP 274

Query: 243 DTRIDRAPKRI------------------------------------------------- 253
           ++      + +                                                 
Sbjct: 275 ESVASATSQIVSVDFATGLDRIQHTNGTGVKVSPQYVTADNIGYLIKGGSSEGIHYTAES 334

Query: 254 ---GNFRSMILAPRFSSNGK---------------------------------------- 270
                    + +P +S +GK                                        
Sbjct: 335 STGTVINGTMRSPSWSPDGKSVVYEKSEFEARPMEKKLYSWDPEWEYRFTDVFPDLSQQG 394

Query: 271 RALISVQKDEAMDIYSVDLQSNATE----RLTN----------TLFINISASYSPDSSQI 316
           R  I+ ++     I ++       +     LT            L      S+SPD   I
Sbjct: 395 RLAITQKQLGNSSIVTMRPDGLDQKLVFDPLTQSNISSSEVGQGLAGAFQPSWSPDGEWI 454

Query: 317 VF------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            F      +S   GK  +   +++GS  + ++ +   +   P +S  G  + + +  G +
Sbjct: 455 AFGIGAWFQSRATGKGYIARAKADGSYHEILT-NGTINAGFPSYSLDGRYLVY-RVWGTE 512

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ET 429
           F + +M       R+L    +   P +SP G+ ++F+R +   T   + +I  +G + + 
Sbjct: 513 FGLRIMDLTDKSVRVLTTTRD-NLPFYSPDGQRIVFTR-RTSYTNFDVCTIRPDGSDLKV 570

Query: 430 LINTPAYASDPQWVG 444
           L ++ A  +   W  
Sbjct: 571 LTSSGANDAHATWTA 585



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 81/207 (39%), Gaps = 32/207 (15%)

Query: 269 GKRALISVQKDE--AMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDR--E 323
           GK+ ++ + +    + ++Y  ++  +   +L  N    +  AS+SPD   I F S+R  +
Sbjct: 48  GKKGVMLMNRIGPSSSELYVANIDGSNERKLLGNNSRFDYHASFSPDGQWITFTSERNGD 107

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQ 382
           G   LY  +++GS  +++           V SP    +A+   +      + VM     +
Sbjct: 108 GNSDLYRCRADGSGLEKLVATSSVED-AGVLSPDASKVAWVSTANGYTTNVWVMDLKTGE 166

Query: 383 ERLLVE----------DSNLQAPTWSPSGRSLIFSRKKDGDTGS-------------KLY 419
           +R L             +    P+WSP G  + FS  ++ +                 +Y
Sbjct: 167 QRNLTSLEGVKGDPTKPNGYFRPSWSPDGEWIAFSSDRNTEWRGHGNGTGWEHTQELSVY 226

Query: 420 SIDLNGRNETLINT-PAYA-SDPQWVG 444
            I  +G +   I +   ++   P+W  
Sbjct: 227 VIRPDGTDFRKIASREGWSLGSPRWSP 253



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 77/194 (39%), Gaps = 22/194 (11%)

Query: 214 LFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNG 269
            F+P +SP+ + +A+   A +      + Y+   + D    + + N       P +S +G
Sbjct: 442 AFQPSWSPDGEWIAFGIGAWFQSRATGKGYIARAKADGSYHEILTNGTINAGFPSYSLDG 501

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQL 328
           +  +  V   E   +  +DL   +   LT T   +    YSPD  +IVF          +
Sbjct: 502 RYLVYRVWGTEFG-LRIMDLTDKSVRVLTTTR--DNLPFYSPDGQRIVFTRRTSYTNFDV 558

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-------------IGV 375
             ++ +GSD K ++    A+     W+  G ++  +   G +               I V
Sbjct: 559 CTIRPDGSDLKVLTSSG-ANDAHATWTADGRILYASGMYGFRDEAAIYDNTFQPYGQIFV 617

Query: 376 MKKDGSQERLLVED 389
           M  DGS + +L + 
Sbjct: 618 MNADGSNKTILTDS 631



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 62/154 (40%), Gaps = 22/154 (14%)

Query: 313 SSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSG 368
             + V   +R G    +LYV   +GS+++++  +     +   +SP G  I FT  +   
Sbjct: 48  GKKGVMLMNRIGPSSSELYVANIDGSNERKLLGNNSRFDYHASFSPDGQWITFTSERNGD 107

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               +   + DGS    LV  S+++     SP    + +    +G   + ++ +DL    
Sbjct: 108 GNSDLYRCRADGSGLEKLVATSSVEDAGVLSPDASKVAWVSTANG-YTTNVWVMDLKTGE 166

Query: 428 ETLINT----------------PAYASDPQWVGF 445
           +  + +                P+++ D +W+ F
Sbjct: 167 QRNLTSLEGVKGDPTKPNGYFRPSWSPDGEWIAF 200



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 53/134 (39%), Gaps = 19/134 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L +MD    ++R LT +RD +   P +SP+ Q++ +          V  +        K 
Sbjct: 515 LRIMDLTDKSVRVLTTTRDNL---PFYSPDGQRIVFTRRTSYTNFDVCTIRPD-GSDLKV 570

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMD--------------IYSVDLQSNATERLT 298
           + +  +      ++++G R L +       D              I+ ++   +    LT
Sbjct: 571 LTSSGANDAHATWTADG-RILYASGMYGFRDEAAIYDNTFQPYGQIFVMNADGSNKTILT 629

Query: 299 NTLFINISASYSPD 312
           ++++ +  A Y P+
Sbjct: 630 DSIWEDSMALYLPN 643


>gi|116622694|ref|YP_824850.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225856|gb|ABJ84565.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 853

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 49/228 (21%), Positives = 96/228 (42%), Gaps = 20/228 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A+    +    ++++ +      P +I +     + P +S    + + S Q
Sbjct: 344 TFSPDGSMIAFLNTANG-PAQIWVKNLAQGD-PIQITSGNLPAVQPHWSPKNDQIVFSRQ 401

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 I+SV        +L        + ++S D  ++VF    E   Q++V +++GS+
Sbjct: 402 GQG---IWSVPPLGGTPRQLIRPG---RNPNFSGDGERLVF----ERGHQIWVARTDGSE 451

Query: 338 QKRISQDKEASYF---DPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            +R+    E  Y     P  S  G+ IAF++   G    + V+   G + R L  D+ + 
Sbjct: 452 ARRVEGVPEWYYGMDSLPALSAHGEWIAFSRPQIGPHGDLWVIPSAGGKARRLTFDTRIS 511

Query: 394 -APTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASD 439
             P W+P  + +I+S  + G     L+ +    G+ E L       +D
Sbjct: 512 TGPVWTPDDQWIIYSSMRGGSFT--LWRVAAAGGKPEALTTGAGEDTD 557



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 102/274 (37%), Gaps = 30/274 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +      + V +    +   +T S +    +P +SP   ++ ++         ++ +   
Sbjct: 357 TANGPAQIWVKNLAQGDPIQIT-SGNLPAVQPHWSPKNDQIVFSRQGQG----IWSVPPL 411

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN----TL 301
                + I   R+    P FS +G+R +     +    I+      +   R+        
Sbjct: 412 GGTPRQLIRPGRN----PNFSGDGERLVF----ERGHQIWVARTDGSEARRVEGVPEWYY 463

Query: 302 FINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            ++   + S     I F   + G    L+V+ S G   +R++ D   S   PVW+P    
Sbjct: 464 GMDSLPALSAHGEWIAFSRPQIGPHGDLWVIPSAGGKARRLTFDTRIS-TGPVWTPDDQW 522

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           I ++   G  F +  +   G +   L            S  GR LI++  ++     KL 
Sbjct: 523 IIYSSMRGGSFTLWRVAAAGGKPEALTTGAGEDTDAAISSDGRHLIYTNARN---TWKLA 579

Query: 420 SIDL-NGRNETL------INTPAYASDPQWVGFM 446
            +DL  G+ + L      +  P+++ D + + FM
Sbjct: 580 LLDLATGKQKELMERRNGLAFPSFSPDGERIAFM 613



 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 97/268 (36%), Gaps = 11/268 (4%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           ++ S         L V+   G   R LT    +I   P ++P+ Q + Y++         
Sbjct: 478 IAFSRPQIGPHGDLWVIPSAGGKARRLTFDT-RISTGPVWTPDDQWIIYSSMRGGSF--T 534

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                     P+ +            SS+G+  + +  ++    +  +DL +   + L  
Sbjct: 535 LWRVAAAGGKPEALTTGAGEDTDAAISSDGRHLIYTNARN-TWKLALLDLATGKQKELME 593

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                   S+SPD  +I F     G  Q++ ++ +G++ ++++  K      P WS  G 
Sbjct: 594 RRNGLAFPSFSPDGERIAFMQVAAGDPQIFTIRRDGTEMRQMTLGKGEINGLPRWSADGA 653

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGS 416
            + + +      +   +   G  +  ++   + +   A    P G  L ++  +  +  +
Sbjct: 654 FVYYYRAYPTP-SFRKVPAAGGADTEVIAGWSWETHNAAQEDPGGGRLAYTLNQKNNQVA 712

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVG 444
            L     +G+   L        +P+W  
Sbjct: 713 TLVREIASGKETRLSEI---LDNPRWSP 737



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 95/305 (31%), Gaps = 56/305 (18%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I++ S    S     +L  +   G     LT    +   +   S + + + Y   +  + 
Sbjct: 523 IIYSSMRGGS----FTLWRVAAAGGKPEALTTGAGE-DTDAAISSDGRHLIYT--NARNT 575

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            ++ L+D    +  + +     +   P FS +G+R            I+++        +
Sbjct: 576 WKLALLDLATGKQKELMERRNGLAF-PSFSPDGERIAFMQVAAGDPQIFTIRRDGTEMRQ 634

Query: 297 LTNTLF-INISASYSPDSSQIVF----------------------------------ESD 321
           +T     IN    +S D + + +                                  + D
Sbjct: 635 MTLGKGEINGLPRWSADGAFVYYYRAYPTPSFRKVPAAGGADTEVIAGWSWETHNAAQED 694

Query: 322 REGKEQLYVMQSNGSDQ----KRISQDKEASYF----DPVWSPQGDLIAFTKFSGEKFAI 373
             G    Y +    +      + I+  KE        +P WSP G  +  T        I
Sbjct: 695 PGGGRLAYTLNQKNNQVATLVREIASGKETRLSEILDNPRWSPDGTALVGTMADQG--VI 752

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            +    G     + + S    P W  +G  + F R +    G  L+SIDL  R E  +  
Sbjct: 753 RICPVAGGACTGVAKGSL---PVWESTGAKIYFWRHRPETAGQYLWSIDLKTREEKELAA 809

Query: 434 PAYAS 438
               S
Sbjct: 810 LGSFS 814


>gi|299137156|ref|ZP_07030338.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
 gi|298600561|gb|EFI56717.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
          Length = 747

 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 86/474 (18%), Positives = 153/474 (32%), Gaps = 92/474 (19%)

Query: 27  FFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDS 86
           F         +V+      +P+ +A  +  S D                          +
Sbjct: 248 FTQLETSGIEEVSVAGGAEAPIHVAIEEPWSGDVSP--------------------DGST 287

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS 146
                      P    W+      LV G + + G     V    W     K +       
Sbjct: 288 LLIISQAGGQGPASSLWSFR----LVGGSLHRLGS---AVSSAAWSPDGEKIVYASASGD 340

Query: 147 SPASWRKI--AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
                R    AH I+           G   S     +   +       L  +  DGAN+R
Sbjct: 341 ISVMRRDGSEAHRIASS--------GGYVRSIAWSPNGDTIRFSKDGLLWEVSADGANLR 392

Query: 205 YLTP--SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            L P  S+    +  +++P+ + V  A      +       +    +P ++    ++   
Sbjct: 393 QLLPGWSKSSTQWSGKWTPDGRFVFVADGQIWLLEDQPGFGSNRPSSPVQLTFGPTVWDR 452

Query: 263 PRFSSNGKRA-------------------------------LISVQKDE---------AM 282
           P  S +GK+                                 +S   D          A 
Sbjct: 453 PISSPDGKKIFASGLTKRGELVRFDIKSSQFKPFLSGISAEFVSFSSDGKSVAYVSYPAG 512

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSD-QKR 340
            ++  +L  +   +LT       S  +SPD SQI F +   +G + ++V+ S+GS   +R
Sbjct: 513 ILWRANLDGSNPIQLTEPPVYPKSVRWSPDGSQIAFVNRTADGVDVIFVVPSDGSGKPQR 572

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSG----EKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           IS D   +  DP WSP G  I F+         K  + ++        ++     L  P 
Sbjct: 573 ISPDDRQAETDPSWSPDGRRIVFSTSPNVGASAKSDLRILDIASHTAAIIPASDGLLVPH 632

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL----INTPAYASDPQWVGFM 446
           WSP GRS+            KL+++  +G+  TL    +  P ++ D +W+ ++
Sbjct: 633 WSPDGRSIA--AMTLDTMSMKLFNLS-SGKWTTLYTGAVAFPEWSHDGRWIYYV 683



 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 79/196 (40%), Gaps = 12/196 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L   + DG+N   LT          R+SP+  ++A+     + +  ++++ +     P+R
Sbjct: 514 LWRANLDGSNPIQLTEPPVYPKSV-RWSPDGSQIAFVNRTADGVDVIFVVPSDGSGKPQR 572

Query: 253 IG-NFRSMILAPRFSSNGKRALISVQKDEAM----DIYSVDLQSNATERLTNTLFINISA 307
           I  + R     P +S +G+R + S   +       D+  +D+ S+    +  +  + +  
Sbjct: 573 ISPDDRQAETDPSWSPDGRRIVFSTSPNVGASAKSDLRILDIASHTAAIIPASDGLLV-P 631

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD   I   +       + +   +      +      +   P WS  G  I + +++
Sbjct: 632 HWSPDGRSIA--AMTLDTMSMKLFNLSSGKWTTLYT---GAVAFPEWSHDGRWIYYVRWT 686

Query: 368 GEKFAIGVMKKDGSQE 383
            +   + +  +DG QE
Sbjct: 687 TDPAVLRIRAEDGKQE 702



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 22/190 (11%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE- 280
           +  ++ +   +   I  V +           I    S       S +G   LI  Q    
Sbjct: 242 DGSRIYFTQLETSGIEEVSVAGGAEAPIHVAIEEPWSGD----VSPDGSTLLIISQAGGQ 297

Query: 281 --AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             A  ++S  L   +  RL + +    SA++SPD  +IV+ S       + VM+ +GS+ 
Sbjct: 298 GPASSLWSFRLVGGSLHRLGSAVS---SAAWSPDGEKIVYASASG---DISVMRRDGSEA 351

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            RI+           WSP GD I F+K       +  +  DG+  R L+   +  +  WS
Sbjct: 352 HRIASSG-GYVRSIAWSPNGDTIRFSKDG----LLWEVSADGANLRQLLPGWSKSSTQWS 406

Query: 399 ----PSGRSL 404
               P GR +
Sbjct: 407 GKWTPDGRFV 416


>gi|301310105|ref|ZP_07216044.1| MdsD protein [Bacteroides sp. 20_3]
 gi|300831679|gb|EFK62310.1| MdsD protein [Bacteroides sp. 20_3]
          Length = 1080

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 62/337 (18%), Positives = 122/337 (36%), Gaps = 41/337 (12%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  ++D +  K              R    T        ++   G   +   F   +  S
Sbjct: 196 DIWMYDTQTGKH---TNLTDHAGEDRNAVFTPDGQTVYFLSERNGGSFNVYSFPLNTPQS 252

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                   V       +R+L+ S D  L    ++ + +   Y      +  +V +   R 
Sbjct: 253 IT-----AVTKFKTHPVRFLSTSSDNTLC---YTYDGE--IYTQRPGVNPQKVRIDLIRD 302

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D+      N      +   S +GK+  ++++     +++      N T+++TNT      
Sbjct: 303 DQEQISDLNSSKGATSATVSPDGKQIALTLRG----EVFVTSADYNTTKQITNTPAAETG 358

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPVWS 355
             +SPD+  + + S+R G  QLY+ +               +++ +   K      P +S
Sbjct: 359 VCFSPDNRTLAYASERGGNWQLYLAKIARKEEANFPNATIIEEEVLLPSKTVERNYPQFS 418

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFS 407
           P G  +AF +   ++  + V+  +  + R + + S   +       +WSP G+   L F 
Sbjct: 419 PDGKELAFIE---DRMRLMVVNLETKKVRQVTDGSTWYSTAGGFDYSWSPDGKWFTLRFI 475

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQWV 443
             K  D  S +  +   G   T +    Y S  PQWV
Sbjct: 476 GNKH-DPYSDIGLVSAQGGEITNLTNSGYTSTSPQWV 511



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 74/215 (34%), Gaps = 34/215 (15%)

Query: 258 SMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           S  + P +      S +G       + D    IY V  +     +LT       +  +SP
Sbjct: 16  SYAVTPLWMRDVQISPDGTEIAFCYKGD----IYKVPAKGGTATQLTTQASYECTPIWSP 71

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
           D  QI F SDR G   L+VM SNG   + ++    AS     ++P G  + F+       
Sbjct: 72  DGKQIAFASDRNGNFDLFVMPSNGGTAQCLTT-HSASEIPSAFTPDGKYVLFSASIQDPA 130

Query: 367 ------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--------- 411
                 +     +  +   G +   ++     +   +  SG++ ++  +K          
Sbjct: 131 QSALFPTSAMTELYKVPIGGGRTEQVLGTP-AEMVCFDKSGKTFLYQDRKGFEDEWRKHH 189

Query: 412 -GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                  ++  D   G++  L +      +  +  
Sbjct: 190 TSSVTRDIWMYDTQTGKHTNLTDHAGEDRNAVFTP 224



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 85/246 (34%), Gaps = 35/246 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S    P +S +GK+   +  +
Sbjct: 29  ISPDGTEIAFCY--KGDIYKV----PAKGGTATQLTTQASYECTPIWSPDGKQIAFASDR 82

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
           +   D++ +       + LT      I ++++PD   ++F +                 +
Sbjct: 83  NGNFDLFVMPSNGGTAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTE 142

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +   G   +++     A       S  G    +               S     I +
Sbjct: 143 LYKVPIGGGRTEQVL-GTPAEMVCFDKS--GKTFLYQDRKGFEDEWRKHHTSSVTRDIWM 199

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                 +   L +     +   ++P G+++ F  +++G +   +YS  LN   +++    
Sbjct: 200 YDTQTGKHTNLTDHAGEDRNAVFTPDGQTVYFLSERNGGS-FNVYSFPLN-TPQSITAVT 257

Query: 435 AYASDP 440
            + + P
Sbjct: 258 KFKTHP 263



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 121/352 (34%), Gaps = 48/352 (13%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK   L +   ++ V        K+  ++PA+   +  +  +      +   G+
Sbjct: 319 ATVSPDGKQIALTLRGEVF-VTSADYNTTKQITNTPAAETGVCFSPDNRTLAYASERGGN 377

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +   +  ++    +     ++            L PS+      P+FSP+ +++A+    
Sbjct: 378 WQLYLAKIARKEEANFPNATII-------EEEVLLPSKTVERNYPQFSPDGKELAFI--- 427

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----RFSSNGKR--ALISVQK-DEAMDI 284
            ED +R+ +++    +  +++ +  +           +S +GK         K D   DI
Sbjct: 428 -EDRMRLMVVNLET-KKVRQVTDGSTWYSTAGGFDYSWSPDGKWFTLRFIGNKHDPYSDI 485

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-----------KEQLYVMQS 333
             V  Q      LTN+ + + S  +  D + I+F ++R G              L  M  
Sbjct: 486 GLVSAQGGEITNLTNSGYTSTSPQWVLDGNAILFTTERYGMRAHASWGSLNDAMLVFMNQ 545

Query: 334 NGSDQKRISQDKE-------------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +  D+ R+S++                         +           +   + +     
Sbjct: 546 DAYDKFRLSKEDYELQKELEKEQKEVTGDKTDDKKKEDKADEKKDEKPKDIVVELKGIQD 605

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              RL    S + +   S +G +L +      +    L+ +DL  +   L++
Sbjct: 606 RILRLTPNSSEMGSAVISKNGETLYYFS--AFEDKYDLWKMDLRKKETKLLH 655



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 73/217 (33%), Gaps = 32/217 (14%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +       
Sbjct: 40  YKGDIYKVPAKGGTATQLTTQAS-YECTPIWSPDGKQIAFASDRNGNFDLFVMPSN--GG 96

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-----------IYSVDLQSNATERL 297
             + +    +  +   F+ +GK  L S    +              +Y V +    TE++
Sbjct: 97  TAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTELYKVPIGGGRTEQV 156

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  +       ++ D
Sbjct: 157 LGTPAEMV--CFDKSGKTFLYQ-DRKGFEDEWRKHHTSSVTRDIWMYDTQTGKHTNLT-D 212

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDG 380
                 + V++P G  + F ++ +G  F +     + 
Sbjct: 213 HAGEDRNAVFTPDGQTVYFLSERNGGSFNVYSFPLNT 249


>gi|320162104|ref|YP_004175329.1| putative S9 family peptidase [Anaerolinea thermophila UNI-1]
 gi|319995958|dbj|BAJ64729.1| putative S9 family peptidase [Anaerolinea thermophila UNI-1]
          Length = 668

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 63/331 (19%), Positives = 114/331 (34%), Gaps = 75/331 (22%)

Query: 176 RILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD- 232
            ++F  + V     K   +L V+   G +    T   D     P +SP+  K+A+ +   
Sbjct: 28  HVVFSVQRVERKNEKKFSNLWVVPTRGGSAFQFTVG-DHTDVHPVWSPDGNKIAFLSNRL 86

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE------------ 280
           D++      +        + +G     I    +S +G++ L++V+K +            
Sbjct: 87  DKEKPPALFIIPFGGGEARPLGQIEGEIGEILWSPDGRKLLLTVRKTDEEVLQRRKDPER 146

Query: 281 --------------------------AMDIYSVDLQSNATERLTNTLFIN-ISASYSPDS 313
                                        ++ +D  +    +LT+    +  S  +SPD 
Sbjct: 147 KSLGTPQRHVERLFYKLDGYGYLPKERWHLWVMDAGTGRAMQLTDHPVWDERSPEWSPDG 206

Query: 314 SQIVFESDREGKEQ-------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             I F S+R            ++++ + G + +++      S     +SP G  +A+   
Sbjct: 207 QWIAFISNRSEDPDSTPEYEDIFIIPARGGEARKL-PTPVGSKSSLRFSPDGKYLAYYAQ 265

Query: 367 SG-----EKFAIGVMKKDGSQERL-LVEDSNLQA---------------PTWSPSGRSLI 405
            G         + V+  DGSQ  + L E  +L                 P WS  G SLI
Sbjct: 266 EGADEGFRNEGLWVVPVDGSQPPVNLTEKYDLHVSSWTINDIGAAATNRPVWSADGESLI 325

Query: 406 FSRKKDGDTGSKLYSIDLNGRN-ETLINTPA 435
           F     G   S +  I  +G   ETLI    
Sbjct: 326 FPVVLHGS--SLMMRIRRDGSGLETLIGEGG 354



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 93/273 (34%), Gaps = 58/273 (21%)

Query: 210 RDQILFEPRFSPNQQKVAYATYD-----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           R Q+L +P+ SP+ + V ++        ++    ++++ TR   A +         + P 
Sbjct: 13  RFQVLADPQISPDGEHVVFSVQRVERKNEKKFSNLWVVPTRGGSAFQ-FTVGDHTDVHPV 71

Query: 265 FSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +S +G +       + K++   ++ +         L           +SPD  +++    
Sbjct: 72  WSPDGNKIAFLSNRLDKEKPPALFIIPFGGGEARPLGQIEGEIGEILWSPDGRKLLLTVR 131

Query: 322 RE----------------GKEQ----------------------LYVMQSNGSDQKRISQ 343
           +                 G  Q                      L+VM +      +++ 
Sbjct: 132 KTDEEVLQRRKDPERKSLGTPQRHVERLFYKLDGYGYLPKERWHLWVMDAGTGRAMQLTD 191

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKF-------AIGVMKKDGSQERLLVED-SNLQAP 395
                   P WSP G  IAF     E          I ++   G + R L     +  + 
Sbjct: 192 HPVWDERSPEWSPDGQWIAFISNRSEDPDSTPEYEDIFIIPARGGEARKLPTPVGSKSSL 251

Query: 396 TWSPSGRSLIFSRKKDGDTGSK---LYSIDLNG 425
            +SP G+ L +  ++  D G +   L+ + ++G
Sbjct: 252 RFSPDGKYLAYYAQEGADEGFRNEGLWVVPVDG 284



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 69/225 (30%), Gaps = 25/225 (11%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-----LRVYLM 242
             +  L VMD        LT         P +SP+ Q +A+ +   ED           +
Sbjct: 171 KERWHLWVMDAGTGRAMQLTDHPVWDERSPEWSPDGQWIAFISNRSEDPDSTPEYEDIFI 230

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-----EAMDIYSVDLQSNA-TER 296
                   +++        + RFS +GK      Q+          ++ V +  +     
Sbjct: 231 IPARGGEARKLPTPVGSKSSLRFSPDGKYLAYYAQEGADEGFRNEGLWVVPVDGSQPPVN 290

Query: 297 LTNTLFINIS--------------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           LT    +++S                +S D   ++F     G   +  ++ +GS  + + 
Sbjct: 291 LTEKYDLHVSSWTINDIGAAATNRPVWSADGESLIFPVVLHGSSLMMRIRRDGSGLETLI 350

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            +    +   V S Q  +        +   I V        R L 
Sbjct: 351 GEGGVFHSHTVDSRQDRMAGIYGNFSDPGQIAVYDFRTGNLRTLT 395



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 68/192 (35%), Gaps = 26/192 (13%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM------ 282
             Y  ++   +++MD    RA +   +      +P +S +G+       + E        
Sbjct: 166 YGYLPKERWHLWVMDAGTGRAMQLTDHPVWDERSPEWSPDGQWIAFISNRSEDPDSTPEY 225

Query: 283 -DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKEQLYVMQSNGS 336
            DI+ +  +     +L   +    S  +SPD   + + +          E L+V+  +GS
Sbjct: 226 EDIFIIPARGGEARKLPTPVGSKSSLRFSPDGKYLAYYAQEGADEGFRNEGLWVVPVDGS 285

Query: 337 DQKR--------------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                             I+    A+   PVWS  G+ + F         +  +++DGS 
Sbjct: 286 QPPVNLTEKYDLHVSSWTINDIGAAATNRPVWSADGESLIFPVVLHGSSLMMRIRRDGSG 345

Query: 383 ERLLVEDSNLQA 394
              L+ +  +  
Sbjct: 346 LETLIGEGGVFH 357



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 70/196 (35%), Gaps = 55/196 (28%)

Query: 305 ISASYSPDSSQIVFESDREGK------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                SPD   +VF   R  +        L+V+ + G    + +   + +   PVWSP G
Sbjct: 18  ADPQISPDGEHVVFSVQRVERKNEKKFSNLWVVPTRGGSAFQFT-VGDHTDVHPVWSPDG 76

Query: 359 DLIAFTKFS---GEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDT 414
           + IAF        +  A+ ++   G + R L + +  +    WSP GR L+ + +K  + 
Sbjct: 77  NKIAFLSNRLDKEKPPALFIIPFGGGEARPLGQIEGEIGEILWSPDGRKLLLTVRKTDEE 136

Query: 415 GSK------------------------------------LYSIDL-NGRNETLIN----- 432
             +                                    L+ +D   GR   L +     
Sbjct: 137 VLQRRKDPERKSLGTPQRHVERLFYKLDGYGYLPKERWHLWVMDAGTGRAMQLTDHPVWD 196

Query: 433 --TPAYASDPQWVGFM 446
             +P ++ D QW+ F+
Sbjct: 197 ERSPEWSPDGQWIAFI 212


>gi|332142931|ref|YP_004428669.1| amidohydrolase [Alteromonas macleodii str. 'Deep ecotype']
 gi|332143024|ref|YP_004428762.1| amidohydrolase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327552953|gb|AEA99671.1| amidohydrolase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327553046|gb|AEA99764.1| amidohydrolase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 1111

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 98/256 (38%), Gaps = 43/256 (16%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS-----SNGKRALISVQKDEAM 282
           YA  D E+     L +  +   P  +           +S      NG+  +     D   
Sbjct: 26  YAQNDSEEKTEYELDNWDVSNPPYALNEVTIKTNETTWSSLDVAPNGEFMVF----DMLG 81

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y V++       LT     NI  S SPD   I F SD++G   ++VM  +GS+ ++++
Sbjct: 82  DLYKVNMNGGDATPLTQDFAWNIHPSISPDGKHIAFISDKDGLSNVWVMDIDGSNLRQVT 141

Query: 343 QDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKKDGSQERLL-------VEDS 390
           ++K      P WSP G+ +       +  S     I +  K G     +        +  
Sbjct: 142 KEKSNLIHSPKWSPDGEYLVVTKGIMSSRSIPAGEIWMYHKSGGDGLQIKARNSGKRDQQ 201

Query: 391 NLQAPTWSPSGRSLIFSRK--------KDGDTGSKLYSID------------LNGRNETL 430
           N+  P +S  G+ + F+           + D    +++I             ++G    +
Sbjct: 202 NIADPVFSHDGKYIYFTENTVPGARFEYNRDPLEGIFAITRYDRETGEESRYISGTGGAV 261

Query: 431 INTPAYASDPQWVGFM 446
           + TP  + D +++ F+
Sbjct: 262 VPTP--SPDGKYIAFV 275



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 66/414 (15%), Positives = 141/414 (34%), Gaps = 86/414 (20%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVL---VTGRVIKEGKDRLRV----EFRLWDVK 134
           ++  S+ Q  +   +     +W+          VT +  +     L V    EF ++D  
Sbjct: 21  MAPASYAQNDSEEKTEYELDNWDVSNPPYALNEVTIKTNETTWSSLDVAPNGEFMVFD-- 78

Query: 135 DRKQIIGKKFFSSPA--SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
               ++G  +  +        +    + +I+ SI+ +       I F+S         ++
Sbjct: 79  ----MLGDLYKVNMNGGDATPLTQDFAWNIHPSISPDG----KHIAFIS----DKDGLSN 126

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATYDDEDILRVYLMDTRIDR 248
           + VMD DG+N+R +T  +  ++  P++SP+ + +       +        +++       
Sbjct: 127 VWVMDIDGSNLRQVTKEKSNLIHSPKWSPDGEYLVVTKGIMSSRSIPAGEIWMYHKSGGD 186

Query: 249 APKRIGNFRS-----MILAPRFSSNGKRALIS----------VQKD---EAMDIYSVDLQ 290
             +             I  P FS +GK    +            +D       I   D +
Sbjct: 187 GLQIKARNSGKRDQQNIADPVFSHDGKYIYFTENTVPGARFEYNRDPLEGIFAITRYDRE 246

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-------- 342
           +    R  +     +  + SPD   I F    + +  L++ +     +  ++        
Sbjct: 247 TGEESRYISGTGGAVVPTPSPDGKYIAFVRRVKDRTGLFLKEIKTGVETPLTLELERDMQ 306

Query: 343 --QDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVED---------- 389
                E  +    W P    I +  ++G KF  I +  K      + VE           
Sbjct: 307 EGFGSEGYFAYFDWMPDSSEIVY--WTGGKFHTIDIEDKITRTMDITVEGTVKYADALRF 364

Query: 390 --------SNLQAPTW---SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431
                    +++   W   SP+G++++F          KLY  D+ +G+ + L 
Sbjct: 365 DVDVAPDEFDVRMIRWSQMSPNGKTVLF------QALGKLYVRDVKSGKIKRLT 412



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 63/314 (20%), Positives = 115/314 (36%), Gaps = 45/314 (14%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGII-----KNSLCVMDRDGANIRYLTPSRD 211
             +D +   +     +F+ R++  S+   +G          L V D     I+ LT   D
Sbjct: 357 KYADALRFDVDVAPDEFDVRMIRWSQMSPNGKTVLFQALGKLYVRDVKSGKIKRLTKQND 416

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              + PRFS + +K+ Y T+DD+D+  V ++  R     K I       + P FS++G++
Sbjct: 417 HDEYYPRFSNDGKKIVYTTWDDQDLGTVRVVSAR-GGKGKVITQQPGHYIEPSFSADGEK 475

Query: 272 ALISVQKDE---------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            +                   IY  DL+ ++  ++T+  +    A ++    ++ F    
Sbjct: 476 VVFRKFTGGFLLDPTYSVEPGIYVADLEEDSVSKVTDNGYN---AHFAGGDDRVYFTESA 532

Query: 323 EG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            G    + QL  +   G+D KR          +   S     +AF       F   V   
Sbjct: 533 GGEAYYETQLSSVNLQGND-KRTHLYGANKVSEYKLSHDKKWVAFVYQ----FKTYVAPF 587

Query: 379 DGSQERLLVEDSNLQAP------------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             + +R+ +  +    P            TWSP  ++L +        G  L+S  L+  
Sbjct: 588 VENGKRITIGPNMTSLPVTQLSSRAGEYLTWSPDNKTLSWF------NGPTLFSRSLDEA 641

Query: 427 NETLINTPAYASDP 440
              L   P    +P
Sbjct: 642 FAFLDGAPETLPEP 655



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 45/349 (12%), Positives = 110/349 (31%), Gaps = 65/349 (18%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFN--SRILFVSESVVSGIIKNSLCVMDRDGAN---- 202
           ++ R++    S+ I+       G++   ++ +  S S+ +G     + +  + G +    
Sbjct: 135 SNLRQVTKEKSNLIHSPKWSPDGEYLVVTKGIMSSRSIPAG----EIWMYHKSGGDGLQI 190

Query: 203 -IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-----------TRIDRAP 250
             R       Q + +P FS + + + +           Y  D            R     
Sbjct: 191 KARNSGKRDQQNIADPVFSHDGKYIYFTENTVPGARFEYNRDPLEGIFAITRYDRETGEE 250

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-----------N 299
            R  +     + P  S +GK      +  +   ++  ++++     LT            
Sbjct: 251 SRYISGTGGAVVPTPSPDGKYIAFVRRVKDRTGLFLKEIKTGVETPLTLELERDMQEGFG 310

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY---------- 349
           +        + PDSS+IV+ +      + + +       + +    E +           
Sbjct: 311 SEGYFAYFDWMPDSSEIVYWT----GGKFHTIDIEDKITRTMDITVEGTVKYADALRFDV 366

Query: 350 ------------FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--P 395
                            SP G  + F         + V      + + L + ++     P
Sbjct: 367 DVAPDEFDVRMIRWSQMSPNGKTVLFQALG----KLYVRDVKSGKIKRLTKQNDHDEYYP 422

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            +S  G+ ++++   D D G+        G+ + +   P +  +P +  
Sbjct: 423 RFSNDGKKIVYTTWDDQDLGTVRVVSARGGKGKVITQQPGHYIEPSFSA 471


>gi|262194670|ref|YP_003265879.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262078017|gb|ACY13986.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1609

 Score =  123 bits (308), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 106/265 (40%), Gaps = 17/265 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V S     ++ +   DGA    +      ++    FSP+ ++VA A+ D      V +
Sbjct: 989  QRVASASSDATVRIWRVDGAGETTVLRGHSDMVTSVDFSPDGRRVASASRDK----SVRV 1044

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                     + +     ++ + RFS +G+  + S  +D ++ +++ D  +       +  
Sbjct: 1045 WRADGTGDERILIGHEGVVSSVRFSPDGRFLV-SASEDASVRVWNAD-GTGTPRIFRDHD 1102

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                SA +SPD ++I   S     + + +  ++GS    + +  EA  +   +SP G  +
Sbjct: 1103 EAVHSAEFSPDGARIAATS---ADKTIRIWNADGSGTPLVLRGHEADVWTARFSPDGKRL 1159

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLY 419
              T +      + +   DGS   L++    +      +SP G+ ++ +     D   +++
Sbjct: 1160 VSTSYDNT---MRIWNTDGSATPLVLRGHEVAVVAADFSPDGQRVVSASY---DNSVRIW 1213

Query: 420  SIDLNGRNETLINTPAYASDPQWVG 444
            + D  G   +L     +  D  +  
Sbjct: 1214 NADGTGTPLSLRGHDDWVMDVAFSP 1238



 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 52/245 (21%), Positives = 100/245 (40%), Gaps = 16/245 (6%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             E    ++R     + VVSG +  S+ + + DG+    +       +    FSP+ Q+V 
Sbjct: 1311 HENEVLSTRFSPDGKRVVSGSMDKSVRIWNSDGSGRPTVLRGHQSWVTATSFSPDGQRVL 1370

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D      V + +    R P  +    +++++  FS +G+R   S  +D  + +++ 
Sbjct: 1371 STSADQ----TVRIWELDGSRDPVVLRGHNNIVVSASFSPDGQRVA-SASRDGTVRVWNA 1425

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D  S A+  + +      S S+SPD  ++    SDR     + V  ++G+    I +  E
Sbjct: 1426 D-GSGASRIIPDHGEAVWSVSFSPDGRRLASASSDRT----IRVWNAHGNGSPVILRGHE 1480

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVE-DSNLQAPTWSPSGRSL 404
                   +SP G  I           I +   DG    ++L      +    +SP G+S+
Sbjct: 1481 DGITSVDFSPDGQRILSGSKDKT---IRIWNADGHGPPQILSRYKGAVHTAQFSPDGQSM 1537

Query: 405  IFSRK 409
            + S  
Sbjct: 1538 VSSSD 1542



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 93/228 (40%), Gaps = 13/228 (5%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             R +       L   RFSP+ Q+VA A+ D      V +           +     M+ +
Sbjct: 968  ARTVFSEHTGALSAVRFSPDGQRVASASSD----ATVRIWRVDGAGETTVLRGHSDMVTS 1023

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              FS +G+R   S  +D+++ ++  D  +     L     +  S  +SPD   +V  S+ 
Sbjct: 1024 VDFSPDGRRVA-SASRDKSVRVWRAD-GTGDERILIGHEGVVSSVRFSPDGRFLVSASE- 1080

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                 + V  ++G+   RI +D + +     +SP G  IA T  + +   I      G+ 
Sbjct: 1081 --DASVRVWNADGTGTPRIFRDHDEAVHSAEFSPDGARIAATS-ADKTIRIWNADGSGTP 1137

Query: 383  ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
              L   ++++    +SP G+ L+ +     D   ++++ D +     L
Sbjct: 1138 LVLRGHEADVWTARFSPDGKRLVSTSY---DNTMRIWNTDGSATPLVL 1182



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 109/264 (41%), Gaps = 21/264 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + VVS    NS+ + + DG          D  + +  FSP+   V  A+ D        +
Sbjct: 1199 QRVVSASYDNSVRIWNADGTGTPLSLRGHDDWVMDVAFSPDGAHVVSASMDK----SARI 1254

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
              +        +      + +  FS +G+R ++S   D ++ I++ D  +     L    
Sbjct: 1255 WPSHSSDELVVLRGHLDQVWSADFSPDGQR-VVSASLDGSVRIWNAD-GTGTPVVLRGHE 1312

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +S  +SPD  ++V  S     + + +  S+GS +  + +  ++      +SP G  +
Sbjct: 1313 NEVLSTRFSPDGKRVVSGSM---DKSVRIWNSDGSGRPTVLRGHQSWVTATSFSPDGQRV 1369

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLY 419
              T        + + + DGS++ +++   N    + ++SP G+ +  S  +DG    +++
Sbjct: 1370 LSTSADQT---VRIWELDGSRDPVVLRGHNNIVVSASFSPDGQRVA-SASRDGTV--RVW 1423

Query: 420  SIDLNGRNETLINTPAYASDPQWV 443
            + D +G +  +I     A    W 
Sbjct: 1424 NADGSGAS-RIIPDHGEA---VWS 1443



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/380 (14%), Positives = 139/380 (36%), Gaps = 56/380 (14%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNS---------LGAQVLVTGRVIKEGKDRLRVE----- 127
            +      +++ +       + W +         +G + +V+  V      R  V      
Sbjct: 1024 VDFSPDGRRVASASRDKSVRVWRADGTGDERILIGHEGVVS-SVRFSPDGRFLVSASEDA 1082

Query: 128  -FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              R+W+              +P  +R   H  +  ++ +     G            + +
Sbjct: 1083 SVRVWNADG---------TGTPRIFRD--HDEA--VHSAEFSPDGA----------RIAA 1119

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 ++ + + DG+    +    +  ++  RFSP+ +++   +YD+     + + +T  
Sbjct: 1120 TSADKTIRIWNADGSGTPLVLRGHEADVWTARFSPDGKRLVSTSYDN----TMRIWNTDG 1175

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               P  +      ++A  FS +G+R ++S   D ++ I++ D        L       + 
Sbjct: 1176 SATPLVLRGHEVAVVAADFSPDGQR-VVSASYDNSVRIWNADGTGTPLS-LRGHDDWVMD 1233

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             ++SPD + +V  S     +   +  S+ SD+  + +      +   +SP G  +     
Sbjct: 1234 VAFSPDGAHVVSASM---DKSARIWPSHSSDELVVLRGHLDQVWSADFSPDGQRVVSASL 1290

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             G    + +   DG+   +++     +  +  +SP G+ ++       D   ++++ D +
Sbjct: 1291 DGS---VRIWNADGTGTPVVLRGHENEVLSTRFSPDGKRVVSGSM---DKSVRIWNSDGS 1344

Query: 425  GRNETLINTPAYASDPQWVG 444
            GR   L    ++ +   +  
Sbjct: 1345 GRPTVLRGHQSWVTATSFSP 1364



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 74/197 (37%), Gaps = 13/197 (6%)

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
                      + A RFS +G+R   S   D  + I+ VD     T  L     +  S  +
Sbjct: 969  RTVFSEHTGALSAVRFSPDGQRVA-SASSDATVRIWRVDGA-GETTVLRGHSDMVTSVDF 1026

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            SPD  ++   S     + + V +++G+  +RI    E       +SP G  +       E
Sbjct: 1027 SPDGRRVASASR---DKSVRVWRADGTGDERILIGHEGVVSSVRFSPDGRFLVSAS---E 1080

Query: 370  KFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              ++ V   DG+    +  D +  + +  +SP G  +  +     D   ++++ D +G  
Sbjct: 1081 DASVRVWNADGTGTPRIFRDHDEAVHSAEFSPDGARIAATS---ADKTIRIWNADGSGTP 1137

Query: 428  ETLINTPAYASDPQWVG 444
              L    A     ++  
Sbjct: 1138 LVLRGHEADVWTARFSP 1154


>gi|319953311|ref|YP_004164578.1| peptidase s41 [Cellulophaga algicola DSM 14237]
 gi|319421971|gb|ADV49080.1| peptidase S41 [Cellulophaga algicola DSM 14237]
          Length = 1085

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 55/258 (21%), Positives = 100/258 (38%), Gaps = 28/258 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MILA-P 263
           +T    QI F  +F        + +   E    ++L++       +     +  M  A P
Sbjct: 235 ITKEEKQITFHKKFDVKSLDANHNSIVYEQGGYLHLVNPETGATNQLAITVKGDMNFARP 294

Query: 264 RF-------------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASY 309
           R+             S  GKRA+   + D    I++V  ++   + +T T  I + +  +
Sbjct: 295 RWENVTAKQLTNPNISPTGKRAVFEHRGD----IFTVPKENGTWKNITKTSGIADRAPVW 350

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SP   +I + SD  G+ QL +   +G  +K         YF P WSP G  IA++     
Sbjct: 351 SPQGDKIAWFSDATGEYQLVIANQDGEQKKSYKLPNNTFYFKPDWSPDGKNIAYS---DT 407

Query: 370 KFAIGVMKK-DGSQERLLVED----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            + I ++    G  E++  +     +    PTWSP  + + F ++   +  +     +  
Sbjct: 408 DYNIWIINLMTGKAEKVATDSYAHPTRTMNPTWSPDSQWIAFPKQLVNNYKAIFAYNNTT 467

Query: 425 GRNETLINTPAYASDPQW 442
                L +  A A  P W
Sbjct: 468 KETIQLTDGLADAISPIW 485



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 67/372 (18%), Positives = 126/372 (33%), Gaps = 98/372 (26%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R   H  +D +      E    +  +LF S       + N L  +   G+   + T    
Sbjct: 98  RLTYHPSADFV------EGWTPDGEVLFRSGRESKPTVTNKLYKVSAAGS---FPTAIDI 148

Query: 212 QILFEPRFSPNQQKVAYA----------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
                  FS N + +AY            Y     + +++++             +   L
Sbjct: 149 PRAAYGEFSKNGKYIAYTPITSWDPEWRNYRGGQAMPIWIVNMDTKELITTPQPTQERHL 208

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL------------------------ 297
            P +     +     ++D A +I+S D  +   +++                        
Sbjct: 209 YPVW--QDSKVFYLSERDYASNIWSFDPITKEEKQITFHKKFDVKSLDANHNSIVYEQGG 266

Query: 298 -----------TNTLFIN--------------------ISASYSPDSSQIVFESDREGKE 326
                      TN L I                      + + SP   + VF    E + 
Sbjct: 267 YLHLVNPETGATNQLAITVKGDMNFARPRWENVTAKQLTNPNISPTGKRAVF----EHRG 322

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-- 384
            ++ +       K I++    +   PVWSPQGD IA+   +  ++ + +  +DG Q++  
Sbjct: 323 DIFTVPKENGTWKNITKTSGIADRAPVWSPQGDKIAWFSDATGEYQLVIANQDGEQKKSY 382

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNE----------TLINT 433
            L  ++    P WSP G+++ +S     DT   ++ I+L  G+ E          T    
Sbjct: 383 KLPNNTFYFKPDWSPDGKNIAYS-----DTDYNIWIINLMTGKAEKVATDSYAHPTRTMN 437

Query: 434 PAYASDPQWVGF 445
           P ++ D QW+ F
Sbjct: 438 PTWSPDSQWIAF 449



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 90/245 (36%), Gaps = 33/245 (13%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           ++     Q+L +P  S    ++ +   +D                  R+ +       P 
Sbjct: 15  FVNAQGTQLLRQPTIS--DTEIVFVYAND------LWKTPLSGGEAIRLTSNEGYESNPH 66

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK    + + D  +D+Y +       +RLT     +    ++PD  +++F S RE 
Sbjct: 67  FSKDGKTIAFTGEYDGNVDVYIIPATGGEPKRLTYHPSADFVEGWTPDG-EVLFRSGRES 125

Query: 325 KE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----------KFSGE 369
           K     +LY + + GS    I   + A      +S  G  IA+T              G+
Sbjct: 126 KPTVTNKLYKVSAAGSFPTAIDIPRAAY---GEFSKNGKYIAYTPITSWDPEWRNYRGGQ 182

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              I ++  D  +     + +  +   P W    + + +  ++  D  S ++S D   + 
Sbjct: 183 AMPIWIVNMDTKELITTPQPTQERHLYPVW-QDSK-VFYLSER--DYASNIWSFDPITKE 238

Query: 428 ETLIN 432
           E  I 
Sbjct: 239 EKQIT 243



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 67/162 (41%), Gaps = 10/162 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                +  L + ++DG   +      +   F+P +SP+ + +AY+  D      +++++ 
Sbjct: 361 SDATGEYQLVIANQDGEQKKSYKLPNNTFYFKPDWSPDGKNIAYSDTD----YNIWIINL 416

Query: 245 RIDRAPKRIGN---FRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNT 300
              +A K   +     +  + P +S + +      Q  +    I++ +  +  T +LT+ 
Sbjct: 417 MTGKAEKVATDSYAHPTRTMNPTWSPDSQWIAFPKQLVNNYKAIFAYNNTTKETIQLTDG 476

Query: 301 LFINISASYSPDSSQIVF-ESDREGKEQLYV-MQSNGSDQKR 340
           L   IS  +    S + F  S   G +  ++ M S  ++  R
Sbjct: 477 LADAISPIWDESGSYLYFLASTNYGLQSGWLDMSSYDTNVTR 518


>gi|134100530|ref|YP_001106191.1| amidohydrolase [Saccharopolyspora erythraea NRRL 2338]
 gi|291004991|ref|ZP_06562964.1| amidohydrolase [Saccharopolyspora erythraea NRRL 2338]
 gi|133913153|emb|CAM03266.1| amidohydrolase [Saccharopolyspora erythraea NRRL 2338]
          Length = 1054

 Score =  123 bits (308), Expect = 8e-26,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 73/182 (40%), Gaps = 3/182 (1%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D+L V         A  R+ +       P FS +G R +    +D    +   D      
Sbjct: 47  DLLNVLWSIPIGGGAAVRLTDVLQEAAEPDFSPDGSRIVFQSYQDGNFHLCLADRDGRGL 106

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            RLT+         +SPD +++ F ++ +G+  ++V+     +         A    PVW
Sbjct: 107 TRLTSGPTDQREPRFSPDGTRVAFAAETDGRYGIHVLTLATGEIAA-WTSGSAQEAQPVW 165

Query: 355 SPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG 412
           +P G  IAFT    +    I ++   G++  L+   + ++  PT+SP GR     R   G
Sbjct: 166 TPDGSAIAFTSSDDDTPQAIDLVDAHGNRRTLVTVSEGDIAGPTFSPDGRLGYVHRTPSG 225

Query: 413 DT 414
             
Sbjct: 226 TA 227



 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 8/196 (4%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + +   ++   +   +      ++    D    ++S+ +   A  RLT+ L       +S
Sbjct: 23  REVVVTQATNASAAVAPGAGSVVV----DLLNVLWSIPIGGGAAVRLTDVLQEAAEPDFS 78

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD S+IVF+S ++G   L +   +G    R++        +P +SP G  +AF   +  +
Sbjct: 79  PDGSRIVFQSYQDGNFHLCLADRDGRGLTRLTS-GPTDQREPRFSPDGTRVAFAAETDGR 137

Query: 371 FAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           + I V+     +       S  +A P W+P G ++ F+   D DT   +  +D +G   T
Sbjct: 138 YGIHVLTLATGEIAAWTSGSAQEAQPVWTPDGSAIAFTSSDD-DTPQAIDLVDAHGNRRT 196

Query: 430 LIN-TPAYASDPQWVG 444
           L+  +    + P +  
Sbjct: 197 LVTVSEGDIAGPTFSP 212



 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 87/248 (35%), Gaps = 36/248 (14%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  P  SP+  +VA+    D       +   R    P+ + +       P +S +G+  +
Sbjct: 306 IVGPVLSPDGTRVAFQALGD-------IWVVRDGEEPEAVVSDGGYNTGPAWSPDGRTLV 358

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +  +   +D++  DL++    RLT+       A +SPD S + F S R     ++ +  
Sbjct: 359 YAGDRAGTLDLWLHDLETGQDRRLTDLEGDETGAVFSPDGSAVAFLSGRS----VHTVDV 414

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAF-------TKFSGEKFAIGVMKKDGSQERLL 386
                +++     A    P +S  G  +          +F   +  +  ++    +    
Sbjct: 415 ASGAVRKVVGPLNAP-GRPSFSADGTRVCLAGFVPTTARFREGENLVLTVELATGEMHYT 473

Query: 387 V-------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS--IDLNGRN--ETLINTPA 435
                    +     P +SP G S+ F        G  L+   +D  GR   E       
Sbjct: 474 HAVPGRSLSNRIDSGPVYSPDGTSMAFV------VGGVLWVSGVDDRGRPSGEARRLGDE 527

Query: 436 YASDPQWV 443
            A+ P W 
Sbjct: 528 TAASPSWS 535



 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 50/313 (15%), Positives = 93/313 (29%), Gaps = 69/313 (22%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N L  +   G     LT    +   EP FSP+  ++ + +Y D +      +  R  R  
Sbjct: 50  NVLWSIPIGGGAAVRLTDVLQEAA-EPDFSPDGSRIVFQSYQDGNFH--LCLADRDGRGL 106

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            R+ +  +    PRFS +G R   + + D    I+ + L +      T+         ++
Sbjct: 107 TRLTSGPTDQREPRFSPDGTRVAFAAETDGRYGIHVLTLATGEIAAWTSGSAQEAQPVWT 166

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD S I F S  +   Q   +     +++ +    E     P +SP G  + +   +   
Sbjct: 167 PDGSAIAFTSSDDDTPQAIDLVDAHGNRRTLVTVSEGDIAGPTFSPDGR-LGYVHRTPSG 225

Query: 371 FAI--------------------------GVMKKDGSQERLLVEDSNLQ----------- 393
            A+                           +   DG   R  +  +              
Sbjct: 226 TALVLDGKVVSDEGEDVFPFSARWLSADELLYTADGRIRRRALGGARSDIPFTAEVSVRE 285

Query: 394 ----------------------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
                                  P  SP G  + F           ++ +      E ++
Sbjct: 286 VSPPPTRRDFDSTADRAVKGIVGPVLSPDGTRVAF------QALGDIWVVRDGEEPEAVV 339

Query: 432 NTPAYASDPQWVG 444
           +   Y + P W  
Sbjct: 340 SDGGYNTGPAWSP 352



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 94/249 (37%), Gaps = 24/249 (9%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
             +L    + V+      + V+ RDG     +  S       P +SP+ + + YA  D  
Sbjct: 308 GPVLSPDGTRVAFQALGDIWVV-RDGEEPEAVV-SDGGYNTGPAWSPDGRTLVYAG-DRA 364

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             L ++L D    +  +R+ +         FS +G              +++VD+ S A 
Sbjct: 365 GTLDLWLHDLETGQD-RRLTDLEGDETGAVFSPDGSAVAFLS----GRSVHTVDVASGAV 419

Query: 295 ERLTNTLFINISASYSPDSSQIV---FE----SDREGKEQLYVMQSNGSDQKRISQDKEA 347
            ++   L      S+S D +++    F       REG+  +  ++    +          
Sbjct: 420 RKVVGPLNAPGRPSFSADGTRVCLAGFVPTTARFREGENLVLTVELATGEMHYTHAVPGR 479

Query: 348 SYFD-----PVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQAPTWSPS 400
           S  +     PV+SP G  +AF    G  +  GV  +     + R L  D    +P+WS  
Sbjct: 480 SLSNRIDSGPVYSPDGTSMAFV-VGGVLWVSGVDDRGRPSGEARRL-GDETAASPSWSED 537

Query: 401 GRSLIFSRK 409
            R+L++   
Sbjct: 538 SRTLLYLSN 546


>gi|256841886|ref|ZP_05547392.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256736780|gb|EEU50108.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 1079

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 62/342 (18%), Positives = 138/342 (40%), Gaps = 26/342 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA-SWRKIAHTISDDIYQSITGEKGDFNS 175
            +   +R+  EFR W             ++    S   I +  + DI+    G++  F S
Sbjct: 178 KQLAYNRVMREFRTWKYYKGGMADDIWVYNPEKKSVENITNNEAQDIFPMWIGDEIYFLS 237

Query: 176 -RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   ++  V +   K +  V +    ++++ +   + I+FE     N   +       +
Sbjct: 238 DRDYTMNLFVYNTKTKQTSKVTNFTEYDVKFPSSFGNTIVFE-----NGGYIYKMDAASK 292

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +V +     +   +  I +    I +   S  G+R +++ +     +++++ +    
Sbjct: 293 KPEKVNVTLASDNVYARSEIKDGSKYITSASLSPKGERMVVTARG----EVFNIPVDKGV 348

Query: 294 TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ +T T       A +SPD   I + SD  G+ +LY+  S G +  +++++ +      
Sbjct: 349 TKNITRTPGAHERDAQWSPDGKHIAYISDATGETELYLQDSEGGEPTQLTKNNDTYIRTF 408

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            WSP    I +T        I ++     Q   + +      +  ++SP    L +SR  
Sbjct: 409 QWSPDSKKIVYTDRKN---RINLLDVSNKQLTTISQSLLGEARNVSFSPDNNWLTYSRVS 465

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           D +  S +Y  D+ G+ E  +        +P +++D +++ F
Sbjct: 466 DNNF-SIVYVYDIAGKKEYPVTDKWYESYSPVFSTDGKYLVF 506



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 111/339 (32%), Gaps = 33/339 (9%)

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
            +    + ITN ++   F  W        +   +         +   +++ K ++     
Sbjct: 208 PEKKSVENITNNEAQDIFPMW--------IGDEIYFLSDRDYTMNLFVYNTKTKQTSKVT 259

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            F               D  + S  G    F +          S   +     +  D   
Sbjct: 260 NFTE------------YDVKFPSSFGNTIVFENGGYIYKMDAASKKPEKVNVTLASDNVY 307

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R       + +     SP  +++      +     V+ +               +    
Sbjct: 308 ARSEIKDGSKYITSASLSPKGERMVVTARGE-----VFNIPVDKGVTKNITRTPGAHERD 362

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFES 320
            ++S +GK            ++Y  D +     +LT  N  +I     +SPDS +IV+  
Sbjct: 363 AQWSPDGKHIAYISDATGETELYLQDSEGGEPTQLTKNNDTYIRTF-QWSPDSKKIVYT- 420

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKD 379
           DR  K ++ ++  +      ISQ       +  +SP  + + +++ S   F+I  V    
Sbjct: 421 DR--KNRINLLDVSNKQLTTISQSLLGEARNVSFSPDNNWLTYSRVSDNNFSIVYVYDIA 478

Query: 380 GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSK 417
           G +E  + +      +P +S  G+ L+F+  +D +    
Sbjct: 479 GKKEYPVTDKWYESYSPVFSTDGKYLVFTSARDFNPTYS 517



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 77/202 (38%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y V       +RLT+ +   +   +SPD   I F    +G  +
Sbjct: 36  NGSEIVFSYAGD----LYKVPATGGEAQRLTSYVGYEMFPRFSPDGKTIAFTGQYDGNTE 91

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKF--AIG 374
           +Y M S+G +  RI+       D       P      W+P G+ I +     + F   + 
Sbjct: 92  VYTMPSSGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGNGIVYRNRISDGFSGKLY 151

Query: 375 VMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSIDL 423
            + K+G   +   L E       ++SP G+ L ++R            G     ++  + 
Sbjct: 152 TVNKEGGLSEVVPLPEGGFC---SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNP 208

Query: 424 NGRN-ETLINTPAYASDPQWVG 444
             ++ E + N  A    P W+G
Sbjct: 209 EKKSVENITNNEAQDIFPMWIG 230



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 56/282 (19%), Positives = 99/282 (35%), Gaps = 52/282 (18%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   + LT S       PRFSP+ + +A+    D +   VY M +     P 
Sbjct: 47  DLYKVPATGGEAQRLT-SYVGYEMFPRFSPDGKTIAFTGQYDGNT-EVYTMPS-SGGEPL 103

Query: 252 RIG-------NFRSMILAP-----RFSSNGKRALI--SVQKDEAMDIYSVDLQSN--ATE 295
           RI        +     + P      ++ +G   +    +    +  +Y+V+ +       
Sbjct: 104 RITYTATNSRDDLGDRMGPNNIVMTWTPDGNGIVYRNRISDGFSGKLYTVNKEGGLSEVV 163

Query: 296 RLTNTLFINISASYSPDSSQIVFES----DREGK-------EQLYVMQSNGSDQKRISQD 344
            L    F     SYSPD  Q+ +       R  K       + ++V        + I+ +
Sbjct: 164 PLPEGGFC----SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNPEKKSVENIT-N 218

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGR 402
            EA    P+W   GD I F         + V      Q   +    + +++ P  S  G 
Sbjct: 219 NEAQDIFPMW--IGDEIYFLSDRDYTMNLFVYNTKTKQTSKVTNFTEYDVKFP--SSFGN 274

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR-----NETLINTPAYASD 439
           +++F      + G  +Y +D   +     N TL +   YA  
Sbjct: 275 TIVF------ENGGYIYKMDAASKKPEKVNVTLASDNVYARS 310


>gi|154687335|ref|YP_001422496.1| YuxL [Bacillus amyloliquefaciens FZB42]
 gi|154353186|gb|ABS75265.1| YuxL [Bacillus amyloliquefaciens FZB42]
          Length = 658

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/314 (17%), Positives = 106/314 (33%), Gaps = 68/314 (21%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           R  +V  +V       S  +M  D    I       D     PR+SP+ +++A+ +  + 
Sbjct: 27  RAAYVRTTVNHKRDSYSSAIMIYDTESGISNPWTFGDNRNTSPRWSPDGRRLAFVSDREN 86

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----------------- 277
            + ++Y++D       K+  +    +  P ++ +G+  L+SV                  
Sbjct: 87  GVPQLYIID-AAGGEAKQAADIPWGVSDPIWAPDGRSVLVSVSLTSAERADEKEKKKHDE 145

Query: 278 ------------KDE-------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                       +D           +  + L++   ++LT+    +  A++SPD  Q+ F
Sbjct: 146 YEPVDIQSLTYKRDGKGLLNGSWAQLVLIHLETGEIQQLTDHEADHYDAAFSPDGRQLAF 205

Query: 319 ES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +      D      +Y+M       K+I+     S+   V+SP G  IA      E   
Sbjct: 206 TANLCELGDAGKPSDVYLMNLADGSLKQITP-HRGSFGSCVFSPDGSYIAMLGHENEFRN 264

Query: 373 -----IGVMKKDGSQERLLVE----------------DSNLQAPTWSPSGRSLIFSRKKD 411
                  +      +   L +                      P W+  G+       + 
Sbjct: 265 ATLEKAWLYDVKTERLSCLTDMLDVHLSDALIADSIIGGVTPRPVWTNDGQGFYVLGSEQ 324

Query: 412 GDTGSKLYSIDLNG 425
           G TG  +Y I ++G
Sbjct: 325 GSTG--IYYISIDG 336



 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 88/240 (36%), Gaps = 49/240 (20%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM----ILAPRFSSNG 269
           + +P+++P+ ++ AY           Y     I      I N  +       +PR+S +G
Sbjct: 16  VTDPQYAPDGRRAAYVRTTVNHKRDSYSSAIMIYDTESGISNPWTFGDNRNTSPRWSPDG 75

Query: 270 KRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----------- 317
           +R      + +    +Y +D      ++  +  +      ++PD   ++           
Sbjct: 76  RRLAFVSDRENGVPQLYIIDAAGGEAKQAADIPWGVSDPIWAPDGRSVLVSVSLTSAERA 135

Query: 318 ------------------FESDREGKE-------QLYVMQSNGSDQKRISQDKEASYFDP 352
                                 R+GK        QL ++     + ++++ D EA ++D 
Sbjct: 136 DEKEKKKHDEYEPVDIQSLTYKRDGKGLLNGSWAQLVLIHLETGEIQQLT-DHEADHYDA 194

Query: 353 VWSPQGDLIAFTKF------SGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +SP G  +AFT        +G+   + +M   DGS +++     +  +  +SP G  + 
Sbjct: 195 AFSPDGRQLAFTANLCELGDAGKPSDVYLMNLADGSLKQITPHRGSFGSCVFSPDGSYIA 254



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 94/243 (38%), Gaps = 56/243 (23%)

Query: 259 MILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +  P+++ +G+RA          +   +  I   D +S  +   T     N S  +SPD
Sbjct: 15  SVTDPQYAPDGRRAAYVRTTVNHKRDSYSSAIMIYDTESGISNPWTFGDNRNTSPRWSPD 74

Query: 313 SSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------ 365
             ++ F SDRE G  QLY++ + G + K+ + D      DP+W+P G  +  +       
Sbjct: 75  GRRLAFVSDRENGVPQLYIIDAAGGEAKQ-AADIPWGVSDPIWAPDGRSVLVSVSLTSAE 133

Query: 366 ------------------------------FSGEKFAIGVMKKDGSQERLLVE-DSNLQA 394
                                          +G    + ++  +  + + L + +++   
Sbjct: 134 RADEKEKKKHDEYEPVDIQSLTYKRDGKGLLNGSWAQLVLIHLETGEIQQLTDHEADHYD 193

Query: 395 PTWSPSGRSLIFSRK--KDGDTG--SKLYSIDL-NGRNETLINTPA------YASDPQWV 443
             +SP GR L F+    + GD G  S +Y ++L +G  + +           ++ D  ++
Sbjct: 194 AAFSPDGRQLAFTANLCELGDAGKPSDVYLMNLADGSLKQITPHRGSFGSCVFSPDGSYI 253

Query: 444 GFM 446
             +
Sbjct: 254 AML 256


>gi|298376894|ref|ZP_06986848.1| exported tricorn protease [Bacteroides sp. 3_1_19]
 gi|298265878|gb|EFI07537.1| exported tricorn protease [Bacteroides sp. 3_1_19]
          Length = 1077

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 62/342 (18%), Positives = 138/342 (40%), Gaps = 26/342 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA-SWRKIAHTISDDIYQSITGEKGDFNS 175
            +   +R+  EFR W             ++    S   I +  + DI+    G++  F S
Sbjct: 176 KQLAYNRVMREFRTWKYYKGGMADDIWVYNPEKKSVENITNNEAQDIFPMWIGDEIYFLS 235

Query: 176 -RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   ++  V +   K +  V +    ++++ +   + I+FE     N   +       +
Sbjct: 236 DRDYTMNLFVYNTKTKQTSKVTNFTEYDVKFPSSFGNTIVFE-----NGGYIYKMDAASK 290

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +V +     +   +  I +    I +   S  G+R +++ +     +++++ +    
Sbjct: 291 KPEKVNVTLASDNVYARSEIKDGSKYITSASLSPKGERMVVTARG----EVFNIPVDKGV 346

Query: 294 TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ +T T       A +SPD   I + SD  G+ +LY+  S G +  +++++ +      
Sbjct: 347 TKNITRTPGAHERDAQWSPDGKHIAYISDATGETELYLQDSEGGEPTQLTKNNDTYIRTF 406

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            WSP    I +T        I ++     Q   + +      +  ++SP    L +SR  
Sbjct: 407 QWSPDSKKIVYTDRKN---RINLLDVSNKQLTTISQSLLGEARNVSFSPDNNWLTYSRVS 463

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           D +  S +Y  D+ G+ E  +        +P +++D +++ F
Sbjct: 464 DNNF-SIVYVYDIAGKKEYPVTDKWYESYSPVFSTDGKYLVF 504



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 111/339 (32%), Gaps = 33/339 (9%)

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
            +    + ITN ++   F  W        +   +         +   +++ K ++     
Sbjct: 206 PEKKSVENITNNEAQDIFPMW--------IGDEIYFLSDRDYTMNLFVYNTKTKQTSKVT 257

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            F               D  + S  G    F +          S   +     +  D   
Sbjct: 258 NFTE------------YDVKFPSSFGNTIVFENGGYIYKMDAASKKPEKVNVTLASDNVY 305

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R       + +     SP  +++      +     V+ +               +    
Sbjct: 306 ARSEIKDGSKYITSASLSPKGERMVVTARGE-----VFNIPVDKGVTKNITRTPGAHERD 360

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFES 320
            ++S +GK            ++Y  D +     +LT  N  +I     +SPDS +IV+  
Sbjct: 361 AQWSPDGKHIAYISDATGETELYLQDSEGGEPTQLTKNNDTYIRTF-QWSPDSKKIVYT- 418

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKD 379
           DR  K ++ ++  +      ISQ       +  +SP  + + +++ S   F+I  V    
Sbjct: 419 DR--KNRINLLDVSNKQLTTISQSLLGEARNVSFSPDNNWLTYSRVSDNNFSIVYVYDIA 476

Query: 380 GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSK 417
           G +E  + +      +P +S  G+ L+F+  +D +    
Sbjct: 477 GKKEYPVTDKWYESYSPVFSTDGKYLVFTSARDFNPTYS 515



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 77/202 (38%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y V       +RLT+ +   +   +SPD   I F    +G  +
Sbjct: 34  NGSEIVFSYAGD----LYKVPATGGEAQRLTSYVGYEMFPRFSPDGKTIAFTGQYDGNTE 89

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKF--AIG 374
           +Y M S+G +  RI+       D       P      W+P G+ I +     + F   + 
Sbjct: 90  VYTMPSSGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGNGIVYRNRISDGFSGKLY 149

Query: 375 VMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSIDL 423
            + K+G   +   L E       ++SP G+ L ++R            G     ++  + 
Sbjct: 150 TVNKEGGLSEVVPLPEGGFC---SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNP 206

Query: 424 NGRN-ETLINTPAYASDPQWVG 444
             ++ E + N  A    P W+G
Sbjct: 207 EKKSVENITNNEAQDIFPMWIG 228



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 56/282 (19%), Positives = 99/282 (35%), Gaps = 52/282 (18%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   + LT S       PRFSP+ + +A+    D +   VY M +     P 
Sbjct: 45  DLYKVPATGGEAQRLT-SYVGYEMFPRFSPDGKTIAFTGQYDGNT-EVYTMPS-SGGEPL 101

Query: 252 RIG-------NFRSMILAP-----RFSSNGKRALI--SVQKDEAMDIYSVDLQSN--ATE 295
           RI        +     + P      ++ +G   +    +    +  +Y+V+ +       
Sbjct: 102 RITYTATNSRDDLGDRMGPNNIVMTWTPDGNGIVYRNRISDGFSGKLYTVNKEGGLSEVV 161

Query: 296 RLTNTLFINISASYSPDSSQIVFES----DREGK-------EQLYVMQSNGSDQKRISQD 344
            L    F     SYSPD  Q+ +       R  K       + ++V        + I+ +
Sbjct: 162 PLPEGGFC----SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNPEKKSVENIT-N 216

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGR 402
            EA    P+W   GD I F         + V      Q   +    + +++ P  S  G 
Sbjct: 217 NEAQDIFPMW--IGDEIYFLSDRDYTMNLFVYNTKTKQTSKVTNFTEYDVKFP--SSFGN 272

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR-----NETLINTPAYASD 439
           +++F      + G  +Y +D   +     N TL +   YA  
Sbjct: 273 TIVF------ENGGYIYKMDAASKKPEKVNVTLASDNVYARS 308


>gi|255015923|ref|ZP_05288049.1| putative exported tricorn protease [Bacteroides sp. 2_1_7]
          Length = 1077

 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 62/342 (18%), Positives = 138/342 (40%), Gaps = 26/342 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA-SWRKIAHTISDDIYQSITGEKGDFNS 175
            +   +R+  EFR W             ++    S   I +  + DI+    G++  F S
Sbjct: 176 KQLAYNRVMREFRTWKYYKGGMADDIWVYNPEKKSVENITNNEAQDIFPMWIGDEIYFLS 235

Query: 176 -RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   ++  V +   K +  V +    ++++ +   + I+FE     N   +       +
Sbjct: 236 DRDYTMNLFVYNTKTKQTSKVTNFTEYDVKFPSSFGNTIVFE-----NGGYIYKMDAASK 290

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +V +     +   +  I +    I +   S  G+R +++ +     +++++ +    
Sbjct: 291 KPEKVNVTLASDNVYARSEIKDGSKYITSASLSPKGERMVVTARG----EVFNIPVDKGV 346

Query: 294 TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ +T T       A +SPD   I + SD  G+ +LY+  S G +  +++++ +      
Sbjct: 347 TKNITRTPGAHERDAQWSPDGKHIAYISDATGETELYLQDSEGGEPTQLTKNNDTYIRTF 406

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            WSP    I +T        I ++     Q   + +      +  ++SP    L +SR  
Sbjct: 407 QWSPDSKKIVYTDRKN---RINLLDVSNKQLTNISQSLLGEARNVSFSPDNNWLTYSRVS 463

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           D +  S +Y  D+ G+ E  +        +P +++D +++ F
Sbjct: 464 DNNF-SIVYVYDIAGKKEYPVTDKWYESYSPVFSTDGKYLVF 504



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 111/339 (32%), Gaps = 33/339 (9%)

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
            +    + ITN ++   F  W        +   +         +   +++ K ++     
Sbjct: 206 PEKKSVENITNNEAQDIFPMW--------IGDEIYFLSDRDYTMNLFVYNTKTKQTSKVT 257

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            F               D  + S  G    F +          S   +     +  D   
Sbjct: 258 NFTE------------YDVKFPSSFGNTIVFENGGYIYKMDAASKKPEKVNVTLASDNVY 305

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R       + +     SP  +++      +     V+ +               +    
Sbjct: 306 ARSEIKDGSKYITSASLSPKGERMVVTARGE-----VFNIPVDKGVTKNITRTPGAHERD 360

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFES 320
            ++S +GK            ++Y  D +     +LT  N  +I     +SPDS +IV+  
Sbjct: 361 AQWSPDGKHIAYISDATGETELYLQDSEGGEPTQLTKNNDTYIRTF-QWSPDSKKIVYT- 418

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKD 379
           DR  K ++ ++  +      ISQ       +  +SP  + + +++ S   F+I  V    
Sbjct: 419 DR--KNRINLLDVSNKQLTNISQSLLGEARNVSFSPDNNWLTYSRVSDNNFSIVYVYDIA 476

Query: 380 GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSK 417
           G +E  + +      +P +S  G+ L+F+  +D +    
Sbjct: 477 GKKEYPVTDKWYESYSPVFSTDGKYLVFTSARDFNPTYS 515



 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 77/202 (38%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y V       +RLT+ +   +   +SPD   I F    +G  +
Sbjct: 34  NGSEIVFSYAGD----LYKVQATGGEAQRLTSYVGYEMFPRFSPDGKTIAFTGQYDGNTE 89

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKF--AIG 374
           +Y M S+G +  RI+       D       P      W+P G+ I +     + F   + 
Sbjct: 90  VYTMPSSGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGNGIVYRNRISDGFSGKLY 149

Query: 375 VMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSIDL 423
            + K+G   +   L E       ++SP G+ L ++R            G     ++  + 
Sbjct: 150 TVNKEGGLSEVVPLPEGGFC---SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNP 206

Query: 424 NGRN-ETLINTPAYASDPQWVG 444
             ++ E + N  A    P W+G
Sbjct: 207 EKKSVENITNNEAQDIFPMWIG 228



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 56/282 (19%), Positives = 99/282 (35%), Gaps = 52/282 (18%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   + LT S       PRFSP+ + +A+    D +   VY M +     P 
Sbjct: 45  DLYKVQATGGEAQRLT-SYVGYEMFPRFSPDGKTIAFTGQYDGNT-EVYTMPS-SGGEPL 101

Query: 252 RIG-------NFRSMILAP-----RFSSNGKRALI--SVQKDEAMDIYSVDLQSN--ATE 295
           RI        +     + P      ++ +G   +    +    +  +Y+V+ +       
Sbjct: 102 RITYTATNSRDDLGDRMGPNNIVMTWTPDGNGIVYRNRISDGFSGKLYTVNKEGGLSEVV 161

Query: 296 RLTNTLFINISASYSPDSSQIVFES----DREGK-------EQLYVMQSNGSDQKRISQD 344
            L    F     SYSPD  Q+ +       R  K       + ++V        + I+ +
Sbjct: 162 PLPEGGFC----SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNPEKKSVENIT-N 216

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGR 402
            EA    P+W   GD I F         + V      Q   +    + +++ P  S  G 
Sbjct: 217 NEAQDIFPMW--IGDEIYFLSDRDYTMNLFVYNTKTKQTSKVTNFTEYDVKFP--SSFGN 272

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR-----NETLINTPAYASD 439
           +++F      + G  +Y +D   +     N TL +   YA  
Sbjct: 273 TIVF------ENGGYIYKMDAASKKPEKVNVTLASDNVYARS 308


>gi|150009318|ref|YP_001304061.1| putative exported tricorn protease [Parabacteroides distasonis ATCC
           8503]
 gi|301311118|ref|ZP_07217047.1| putative exported tricorn protease [Bacteroides sp. 20_3]
 gi|149937742|gb|ABR44439.1| putative exported tricorn protease [Parabacteroides distasonis ATCC
           8503]
 gi|300831181|gb|EFK61822.1| putative exported tricorn protease [Bacteroides sp. 20_3]
          Length = 1077

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 63/342 (18%), Positives = 139/342 (40%), Gaps = 26/342 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKK-FFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            +   +R+  EFR W             + S   S   I +  + DI+    G++  F S
Sbjct: 176 KQLAYNRVMREFRTWKYYKGGMADDIWVYNSEKKSVENITNNEAQDIFPMWIGDEIYFLS 235

Query: 176 -RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   ++  V +   K +  V +    ++++ +   + I+FE     N   +       +
Sbjct: 236 DRDYTMNLFVYNTKTKQTSKVTNFTEYDVKFPSSFGNTIVFE-----NGGYIYKMDAASK 290

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +  +V +     +   +  I +    I +   S  G+R +++ +     +++++ +    
Sbjct: 291 EPEKVNVTLASDNVYARSEIKDGSKYITSASLSPKGERMVVTARG----EVFNIPVDKGV 346

Query: 294 TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ +T T       A +SPD   I + SD  G+ +LY+  S G +  +++++ +      
Sbjct: 347 TKNITRTPGAHERDAQWSPDGKHIAYISDATGETELYLQDSEGGEPTQLTKNNDTYIRTF 406

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            WSP    I +T        I ++     Q   + +      +  ++SP    L +SR  
Sbjct: 407 QWSPDSKKIVYTDRKN---RINLLDVSNKQLTTISQSLLGEARNVSFSPDNNWLTYSRVS 463

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           D +  S +Y  D+ G+ E  +        +P +++D +++ F
Sbjct: 464 DNNF-SIVYVYDIAGKKEYPVTDKWYESYSPVFSTDGKYLVF 504



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 52/333 (15%), Positives = 110/333 (33%), Gaps = 33/333 (9%)

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
           + ITN ++   F  W        +   +         +   +++ K ++      F    
Sbjct: 212 ENITNNEAQDIFPMW--------IGDEIYFLSDRDYTMNLFVYNTKTKQTSKVTNFTE-- 261

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
                      D  + S  G    F +          S   +     +  D    R    
Sbjct: 262 ----------YDVKFPSSFGNTIVFENGGYIYKMDAASKEPEKVNVTLASDNVYARSEIK 311

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + +     SP  +++      +     V+ +               +     ++S +
Sbjct: 312 DGSKYITSASLSPKGERMVVTARGE-----VFNIPVDKGVTKNITRTPGAHERDAQWSPD 366

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKE 326
           GK            ++Y  D +     +LT  N  +I     +SPDS +IV+  DR  K 
Sbjct: 367 GKHIAYISDATGETELYLQDSEGGEPTQLTKNNDTYIRTF-QWSPDSKKIVYT-DR--KN 422

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERL 385
           ++ ++  +      ISQ       +  +SP  + + +++ S   F+I  V    G +E  
Sbjct: 423 RINLLDVSNKQLTTISQSLLGEARNVSFSPDNNWLTYSRVSDNNFSIVYVYDIAGKKEYP 482

Query: 386 LVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSK 417
           + +      +P +S  G+ L+F+  +D +    
Sbjct: 483 VTDKWYESYSPVFSTDGKYLVFTSARDFNPTYS 515



 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 77/202 (38%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y V       +RLT+ +   +   +SPD   I F    +G  +
Sbjct: 34  NGSEIVFSYAGD----LYKVPATGGEAQRLTSYVGYEMFPRFSPDGKTIAFTGQYDGNTE 89

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKF--AIG 374
           +Y M S+G +  RI+       D       P      W+P G+ I +     + F   + 
Sbjct: 90  VYTMPSSGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGNGIVYRNRISDGFSGKLY 149

Query: 375 VMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSIDL 423
            + K+G   +   L E       ++SP G+ L ++R            G     ++  + 
Sbjct: 150 TVNKEGGLSEVVPLPEGGFC---SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNS 206

Query: 424 NGRN-ETLINTPAYASDPQWVG 444
             ++ E + N  A    P W+G
Sbjct: 207 EKKSVENITNNEAQDIFPMWIG 228



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 57/282 (20%), Positives = 100/282 (35%), Gaps = 52/282 (18%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   + LT S       PRFSP+ + +A+    D +   VY M +     P 
Sbjct: 45  DLYKVPATGGEAQRLT-SYVGYEMFPRFSPDGKTIAFTGQYDGNT-EVYTMPS-SGGEPL 101

Query: 252 RIG-------NFRSMILAP-----RFSSNGKRALI--SVQKDEAMDIYSVDLQSN--ATE 295
           RI        +     + P      ++ +G   +    +    +  +Y+V+ +       
Sbjct: 102 RITYTATNSRDDLGDRMGPNNIVMTWTPDGNGIVYRNRISDGFSGKLYTVNKEGGLSEVV 161

Query: 296 RLTNTLFINISASYSPDSSQIVFES----DREGK-------EQLYVMQSNGSDQKRISQD 344
            L    F     SYSPD  Q+ +       R  K       + ++V  S     + I+ +
Sbjct: 162 PLPEGGFC----SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNSEKKSVENIT-N 216

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGR 402
            EA    P+W   GD I F         + V      Q   +    + +++ P  S  G 
Sbjct: 217 NEAQDIFPMW--IGDEIYFLSDRDYTMNLFVYNTKTKQTSKVTNFTEYDVKFP--SSFGN 272

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR-----NETLINTPAYASD 439
           +++F      + G  +Y +D   +     N TL +   YA  
Sbjct: 273 TIVF------ENGGYIYKMDAASKEPEKVNVTLASDNVYARS 308


>gi|316967493|gb|EFV51909.1| conserved hypothetical protein [Trichinella spiralis]
          Length = 382

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 99/269 (36%), Gaps = 35/269 (13%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF----SPNQQKVAYATYDDEDILRVY 240
             G  + +      D ++  Y T S+             SP +Q      ++  +   + 
Sbjct: 89  SDGRGQTTCSFFFPDNSSFIYSTTSKAGAECPKSVCEGSSPPKQCNNSYIWNIFNGFNIL 148

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERL 297
           L  T        + +          S +GK  + +  +   +D++ + L         +L
Sbjct: 149 L--TDSTGKTHYLTDDSFYNAEGAVSPDGKSIVFTSTRGGDLDLWLMRLNGTEVVNITQL 206

Query: 298 TNTLFINISASYSPDSSQIVFESDREGK--------------------EQLYVMQSNGSD 337
           T+    +  A +SP   +IV+ +                          +++ M ++GSD
Sbjct: 207 TDITGYDGGAFFSPLGDKIVYRAYHPKTAEEITNYFQLLNLSITKPLHMEIFTMNADGSD 266

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQ-ERLLVEDSNLQ 393
           QK+++    AS+  P + P G  I F+         F + ++ +DG+  E++        
Sbjct: 267 QKQLTNFGYASW-APYFYPDGSKIIFSSNHHGNHSVFNLFLIDQDGNNLEQITTNPGLDM 325

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            P +S   + LIF   ++G+ G  ++  D
Sbjct: 326 FPMFSYDKKKLIFVSNRNGN-GFNVFMAD 353



 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/262 (20%), Positives = 85/262 (32%), Gaps = 52/262 (19%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI---------- 284
             +R       +   P+ I + R       F  +    + S       +           
Sbjct: 70  PRIRSAWQSPNLTAGPQLISDGRGQTTCSFFFPDNSSFIYSTTSKAGAECPKSVCEGSSP 129

Query: 285 -----------------YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                              +   +  T  LT+  F N   + SPD   IVF S R G   
Sbjct: 130 PKQCNNSYIWNIFNGFNILLTDSTGKTHYLTDDSFYNAEGAVSPDGKSIVFTSTRGGDLD 189

Query: 328 LYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSGE---------------- 369
           L++M+ NG++   I+Q  +         +SP GD I +  +  +                
Sbjct: 190 LWLMRLNGTEVVNITQLTDITGYDGGAFFSPLGDKIVYRAYHPKTAEEITNYFQLLNLSI 249

Query: 370 ----KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD-TGSKLYSIDL 423
                  I  M  DGS ++ L        AP + P G  +IFS    G+ +   L+ ID 
Sbjct: 250 TKPLHMEIFTMNADGSDQKQLTNFGYASWAPYFYPDGSKIIFSSNHHGNHSVFNLFLIDQ 309

Query: 424 NGRN-ETLINTPAYASDPQWVG 444
           +G N E +   P     P +  
Sbjct: 310 DGNNLEQITTNPGLDMFPMFSY 331



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 73/193 (37%), Gaps = 27/193 (13%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H ++DD + +  G        I+F S           L +M  +G  +  +T   D   +
Sbjct: 157 HYLTDDSFYNAEGAVSPDGKSIVFTSTRGGD----LDLWLMRLNGTEVVNITQLTDITGY 212

Query: 216 EPR--FSPNQQKVAYATYDDEDILRV----YLMDTRI--------------DRAPKRIGN 255
           +    FSP   K+ Y  Y  +    +     L++  I                  K++ N
Sbjct: 213 DGGAFFSPLGDKIVYRAYHPKTAEEITNYFQLLNLSITKPLHMEIFTMNADGSDQKQLTN 272

Query: 256 FRSMILAPRFSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPD 312
           F     AP F  +G + + S          +++ +D   N  E++T    +++   +S D
Sbjct: 273 FGYASWAPYFYPDGSKIIFSSNHHGNHSVFNLFLIDQDGNNLEQITTNPGLDMFPMFSYD 332

Query: 313 SSQIVFESDREGK 325
             +++F S+R G 
Sbjct: 333 KKKLIFVSNRNGN 345


>gi|158334384|ref|YP_001515556.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158304625|gb|ABW26242.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1187

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 63/378 (16%), Positives = 132/378 (34%), Gaps = 57/378 (15%)

Query: 74   QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGA----------QVLVTGRVIKEG--- 120
            + S     ++     Q+I +       + W++ G             +++     +G   
Sbjct: 820  EHSGAIRSVAFSPDGQRIVSGSYDNTLRLWDAQGNPIGQPWTGHTNYVLSVAFSPDGQRI 879

Query: 121  -KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     RLWD +            +P       HT  + ++       G        
Sbjct: 880  VSGSYDNTLRLWDAQ-----------GNPIGQPWTGHT--NYVWSVAFSPDG-------- 918

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              + +VSG   N+L + D  G  I          +    FSP+ Q++   +YD+     +
Sbjct: 919  --QRIVSGSYDNTLRLWDAQGNPIGQPWTGHTNYVLSVAFSPDGQRIVSGSYDN----TL 972

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
             L D + +   +      + + +  FS +G+R + S   D  + ++  D Q N   +  T
Sbjct: 973  RLWDAQGNLIGQPWTGHTNYVRSVAFSPDGQRIV-SGSYDNTLRLW--DAQGNPIGQPWT 1029

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   S ++SPD  +IV  SD    + L +  + G+   +         +   +SP G
Sbjct: 1030 GHTNYVWSVAFSPDGQRIVSGSD---DKTLRLWDAQGNPIGQPWTGHTNYVWSVAFSPDG 1086

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
              I           + +    G+          +++++  +SP G+ ++       D   
Sbjct: 1087 QRIVSGSSDNT---LRLWDAQGNPIGQPWTGHTNSVRSVAFSPDGQRIVSGSD---DKTL 1140

Query: 417  KLYSIDLNGRNETLINTP 434
            +L+ +D  G+   ++ T 
Sbjct: 1141 RLWEVD-TGKCLAVVQTG 1157



 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 52/298 (17%), Positives = 103/298 (34%), Gaps = 43/298 (14%)

Query: 115  RVIKEGK----DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
             V  +G+           ++WD    + +           W +  H  S  I        
Sbjct: 787  AVSPDGQRWAIGEDNGRLQMWDASTGRVL-----------WIRQEH--SGAIRSVAFSPD 833

Query: 171  GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            G          + +VSG   N+L + D  G  I          +    FSP+ Q++   +
Sbjct: 834  G----------QRIVSGSYDNTLRLWDAQGNPIGQPWTGHTNYVLSVAFSPDGQRIVSGS 883

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            YD+     + L D + +   +      + + +  FS +G+R + S   D  + ++  D Q
Sbjct: 884  YDN----TLRLWDAQGNPIGQPWTGHTNYVWSVAFSPDGQRIV-SGSYDNTLRLW--DAQ 936

Query: 291  SNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
             N   +  T      +S ++SPD  +IV  S       L +  + G+   +         
Sbjct: 937  GNPIGQPWTGHTNYVLSVAFSPDGQRIVSGSY---DNTLRLWDAQGNLIGQPWTGHTNYV 993

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLI 405
                +SP G  I    +      + +    G+          + + +  +SP G+ ++
Sbjct: 994  RSVAFSPDGQRIVSGSYDNT---LRLWDAQGNPIGQPWTGHTNYVWSVAFSPDGQRIV 1048



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 88/237 (37%), Gaps = 19/237 (8%)

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G     L + D     + ++       +    FSP+ Q++   +YD+     + L D + 
Sbjct: 798  GEDNGRLQMWDASTGRVLWIRQEHSGAIRSVAFSPDGQRIVSGSYDN----TLRLWDAQG 853

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINI 305
            +   +      + +L+  FS +G+R + S   D  + ++  D Q N   +  T       
Sbjct: 854  NPIGQPWTGHTNYVLSVAFSPDGQRIV-SGSYDNTLRLW--DAQGNPIGQPWTGHTNYVW 910

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S ++SPD  +IV  S       L +  + G+   +             +SP G  I    
Sbjct: 911  SVAFSPDGQRIVSGSY---DNTLRLWDAQGNPIGQPWTGHTNYVLSVAFSPDGQRIVSGS 967

Query: 366  FSGEKFAIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +      + +    G+   +      + +++  +SP G+ ++       D   +L+ 
Sbjct: 968  YDNT---LRLWDAQGNLIGQPWTGHTNYVRSVAFSPDGQRIVSGSY---DNTLRLWD 1018



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 74/224 (33%), Gaps = 18/224 (8%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N+  L   ++    E   + +         +  ++  + +   R   A  R     ++
Sbjct: 726 GGNLTQLLVDKNPWALE---THDLSDTHLQGVNFANVSLLQVNLARASLAEARFNKVLAV 782

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVF 318
           I     S +G+R  I  + +  + ++  D  +     +         S ++SPD  +IV 
Sbjct: 783 IYTIAVSPDGQRWAI-GEDNGRLQMW--DASTGRVLWIRQEHSGAIRSVAFSPDGQRIVS 839

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S       L +  + G+   +             +SP G  I    +      + +   
Sbjct: 840 GSY---DNTLRLWDAQGNPIGQPWTGHTNYVLSVAFSPDGQRIVSGSYDNT---LRLWDA 893

Query: 379 DGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            G+          + + +  +SP G+ ++       D   +L+ 
Sbjct: 894 QGNPIGQPWTGHTNYVWSVAFSPDGQRIVSGSY---DNTLRLWD 934



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 70/212 (33%), Gaps = 43/212 (20%)

Query: 88   KQKITNPDSIPRFQDWNSLGA----------QVLVTGRVIKEG----KDRLRVEFRLWDV 133
             Q+I +       + W++ G             + +     +G            RLWD 
Sbjct: 960  GQRIVSGSYDNTLRLWDAQGNLIGQPWTGHTNYVRSVAFSPDGQRIVSGSYDNTLRLWD- 1018

Query: 134  KDRKQIIGKKFFS----------SPASWRKIAHTISDDIYQSITGEKG-----DFNSRIL 178
              +   IG+ +            SP   R ++   SDD    +   +G      +     
Sbjct: 1019 -AQGNPIGQPWTGHTNYVWSVAFSPDGQRIVSG--SDDKTLRLWDAQGNPIGQPWTGHTN 1075

Query: 179  FV--------SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            +V         + +VSG   N+L + D  G  I          +    FSP+ Q++   +
Sbjct: 1076 YVWSVAFSPDGQRIVSGSSDNTLRLWDAQGNPIGQPWTGHTNSVRSVAFSPDGQRIVSGS 1135

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             D    LR++ +DT    A  + G    +  +
Sbjct: 1136 DD--KTLRLWEVDTGKCLAVVQTGLCGGLDFS 1165


>gi|262194671|ref|YP_003265880.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262078018|gb|ACY13987.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1583

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 74/346 (21%), Positives = 134/346 (38%), Gaps = 29/346 (8%)

Query: 88   KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
             Q+I +       + WN+ GA V V   +     D L   F      D + I+      +
Sbjct: 1180 GQRIVSASFDNSVRIWNADGAGVPVV--LRGHRDDVLSARFS----PDGRDIVSASKDGT 1233

Query: 148  PASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYL 206
               W   AH   DD    + G +G   S         VVS     S  + + DG     +
Sbjct: 1234 VRVW--GAH---DDNTAVLRGHRGRLYSATFSPDGARVVSASHDTSARIWNADGTGHAIV 1288

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                D+ +    FSP+ Q+V  A++D      V + +      P  +      + +  FS
Sbjct: 1289 LNGHDEGVTHASFSPDGQRVVTASFDK----SVRIWNADGTGDPMILRGHDDWVTSAVFS 1344

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             +G+R   S   D+++ I+  D   +    L +T  I +S S+SPD  ++   S     +
Sbjct: 1345 PDGQRVA-SASFDKSIRIWHADGSGDPVVLLGHTAQI-LSVSFSPDGRRVASAS---WDK 1399

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             + +  ++GS +  I  + E +     +SP G  +A   +      + +   DGS E +L
Sbjct: 1400 TVRIWNADGSGETTILGEHEDTVRWVSFSPDGQRVASASWDQS---VRIWNADGSGEPVL 1456

Query: 387  VED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +      + +  +SP G+ +  +     D   +++  D  G    L
Sbjct: 1457 LRGHEGLVLSAEFSPDGQLVASASM---DKTIRIWRADGTGSPVIL 1499



 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 99/246 (40%), Gaps = 17/246 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              V S     S+ V + DG+ +  +       +    FSP+ +++  A++D      V +
Sbjct: 971  RRVASASWDKSVRVWNADGSGVPLVLRGHTDKVMAASFSPDGRRIVSASWDQ----TVRV 1026

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +      P  +      +++ RFS +G+R + S   D ++ I++ D  S     L    
Sbjct: 1027 WNADGSGRPIVLRGHEKAVMSARFSPDGRRIV-SASWDRSVRIWNAD-GSGQPIVLRGHE 1084

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                +A +SPD +++V  S     + + V +++GS +  +            +SP    I
Sbjct: 1085 DAVTAAVFSPDGTRVVSASH---DDSVRVWRADGSGKPSVLLGHTDDVMAASFSPDNRRI 1141

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLY 419
                       + V   DG+ E LL+     +  +  +SP G+ ++       D   +++
Sbjct: 1142 VSASKDQS---LRVWPADGTGEPLLLRGHQDEVFSACFSPDGQRIV---SASFDNSVRIW 1195

Query: 420  SIDLNG 425
            + D  G
Sbjct: 1196 NADGAG 1201



 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/234 (21%), Positives = 101/234 (43%), Gaps = 15/234 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              +VS     ++ V + DG+    +    ++ +   RFSP+ +++  A++D      V +
Sbjct: 1013 RRIVSASWDQTVRVWNADGSGRPIVLRGHEKAVMSARFSPDGRRIVSASWDR----SVRI 1068

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +      P  +      + A  FS +G R ++S   D+++ ++  D  S     L    
Sbjct: 1069 WNADGSGQPIVLRGHEDAVTAAVFSPDGTR-VVSASHDDSVRVWRAD-GSGKPSVLLGHT 1126

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               ++AS+SPD+ +IV  S     + L V  ++G+ +  + +  +   F   +SP G  I
Sbjct: 1127 DDVMAASFSPDNRRIVSASK---DQSLRVWPADGTGEPLLLRGHQDEVFSACFSPDGQRI 1183

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGD 413
                F      + +   DG+   +++        +  +SP GR ++ S  KDG 
Sbjct: 1184 VSASFDNS---VRIWNADGAGVPVVLRGHRDDVLSARFSPDGRDIV-SASKDGT 1233



 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 50/229 (21%), Positives = 95/229 (41%), Gaps = 15/229 (6%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             R +      +++   FSP+ ++VA A++D      V + +      P  +      ++A
Sbjct: 950  ARTVFTDHGNMVWYADFSPDGRRVASASWDK----SVRVWNADGSGVPLVLRGHTDKVMA 1005

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-D 321
              FS +G+R + S   D+ + +++ D  S     L       +SA +SPD  +IV  S D
Sbjct: 1006 ASFSPDGRRIV-SASWDQTVRVWNAD-GSGRPIVLRGHEKAVMSARFSPDGRRIVSASWD 1063

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            R     + +  ++GS Q  + +  E +    V+SP G  +           +      G 
Sbjct: 1064 RS----VRIWNADGSGQPIVLRGHEDAVTAAVFSPDGTRVVSASHDDSV-RVWRADGSGK 1118

Query: 382  QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
               LL    ++ A ++SP  R ++ + K   D   +++  D  G    L
Sbjct: 1119 PSVLLGHTDDVMAASFSPDNRRIVSASK---DQSLRVWPADGTGEPLLL 1164



 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 13/238 (5%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + VV+     S+ + + DG     +    D  +    FSP+ Q+VA A++D      + +
Sbjct: 1306 QRVVTASFDKSVRIWNADGTGDPMILRGHDDWVTSAVFSPDGQRVASASFDK----SIRI 1361

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                    P  +    + IL+  FS +G+R   S   D+ + I++ D  S  T  L    
Sbjct: 1362 WHADGSGDPVVLLGHTAQILSVSFSPDGRRVA-SASWDKTVRIWNAD-GSGETTILGEHE 1419

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  S+SPD  ++   S     + + +  ++GS +  + +  E       +SP G L+
Sbjct: 1420 DTVRWVSFSPDGQRVASAS---WDQSVRIWNADGSGEPVLLRGHEGLVLSAEFSPDGQLV 1476

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            A      +   I      GS   L   D  +   ++ P G+ L+ +     D   +++
Sbjct: 1477 ASASMD-KTIRIWRADGTGSPVILRGHDEGVTHASFRPDGQGLVSASD---DWTIRIW 1530



 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 103/277 (37%), Gaps = 14/277 (5%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             EK   ++R       +VS     S+ + + DG+    +    +  +    FSP+  +V 
Sbjct: 1041 HEKAVMSARFSPDGRRIVSASWDRSVRIWNADGSGQPIVLRGHEDAVTAAVFSPDGTRVV 1100

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A++DD     V +        P  +      ++A  FS + +R + S  KD+++ ++  
Sbjct: 1101 SASHDD----SVRVWRADGSGKPSVLLGHTDDVMAASFSPDNRRIV-SASKDQSLRVWPA 1155

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            D  +     L        SA +SPD  +IV  S       + +  ++G+    + +    
Sbjct: 1156 D-GTGEPLLLRGHQDEVFSACFSPDGQRIVSASF---DNSVRIWNADGAGVPVVLRGHRD 1211

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                  +SP G  I      G     G    + +  R       L + T+SP G  ++ +
Sbjct: 1212 DVLSARFSPDGRDIVSASKDGTVRVWGAHDDNTAVLR--GHRGRLYSATFSPDGARVVSA 1269

Query: 408  RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                 DT +++++ D  G    L       +   +  
Sbjct: 1270 SH---DTSARIWNADGTGHAIVLNGHDEGVTHASFSP 1303


>gi|254494925|ref|ZP_01052559.2| peptidase family S41 [Polaribacter sp. MED152]
 gi|213690507|gb|EAQ41987.2| peptidase family S41 [Polaribacter sp. MED152]
          Length = 1080

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 16/212 (7%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +  +   ++ +  R  N     L  P  S  GKRA+   +     +I++V  ++     L
Sbjct: 282 IINVKGDLNYSRTRWMNVSGRNLTNPNISPKGKRAIFEYRG----EIFTVPKENGTWRNL 337

Query: 298 TNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           TN+  I + S  +SP   Q+ + SD+ G+ +L +   NG++Q+ I       YF P WSP
Sbjct: 338 TNSSGIADRSPIWSPKGDQVAWFSDKNGEYELVLADQNGNNQEFIKLPNPTFYFQPDWSP 397

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-----NLQAPTWSPSGRSLIFSRKKD 411
            G  IA+T      F I ++  +  +      D          P +SP    ++++++ D
Sbjct: 398 NGKYIAYT---DTNFVIWIINLETKKIVKADADGFAHPNRAMNPKFSPDSDWIVYAKQND 454

Query: 412 GDTGSKLYSIDLNGRNETLINTP-AYASDPQW 442
               S +Y+  L+ +    I    A A  P W
Sbjct: 455 NSFKS-VYAYQLSTQKIVQITDKIADAITPVW 485



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 81/203 (39%), Gaps = 25/203 (12%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                R+ +      +P+FS +G+    + Q D  +D+Y V +     +RLT     +I 
Sbjct: 49  GGNAVRLTSDDGYESSPKFSKDGQWIAFTAQYDGNIDVYLVSINGGEPKRLTYHSASDIV 108

Query: 307 ASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             ++PD  +I+F S+REG+     + Y + + G   +  + D   + F    S     IA
Sbjct: 109 QGWTPDG-KILFRSNREGRPTQTNKFYTIGAEGGMPE--AFDIPRAAFGE-ISEDNKYIA 164

Query: 363 FT-----------KFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRK 409
           +T              G+   I ++     +      ++      P W     ++ +  +
Sbjct: 165 YTPITSWDAEWRNYRGGQAMPIWIVNLKTKELIKTPQLDGERHVNPVWFK--GNVYYISE 222

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           +  D  + ++S +L  + ET I 
Sbjct: 223 R--DYTANIWSYNLKTKKETQIT 243



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 66/182 (36%), Gaps = 28/182 (15%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A D++   +      RLT+      S  +S D   I F +  +G   +Y++  NG + KR
Sbjct: 39  AADLWKAPINGGNAVRLTSDDGYESSPKFSKDGQWIAFTAQYDGNIDVYLVSINGGEPKR 98

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----AIGVMKKDGSQERLLVEDSNLQAPT 396
           ++    AS     W+P G  I F      +         +  +G       E  ++    
Sbjct: 99  LTY-HSASDIVQGWTPDGK-ILFRSNREGRPTQTNKFYTIGAEGGMP----EAFDIPRAA 152

Query: 397 W---SPSGRSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASD----P 440
           +   S   + + ++         R   G     ++ ++L  + + LI TP    +    P
Sbjct: 153 FGEISEDNKYIAYTPITSWDAEWRNYRGGQAMPIWIVNL--KTKELIKTPQLDGERHVNP 210

Query: 441 QW 442
            W
Sbjct: 211 VW 212



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 57/322 (17%), Positives = 108/322 (33%), Gaps = 51/322 (15%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R   H+ SD I Q  T      + +ILF S         N    +  +G         R 
Sbjct: 98  RLTYHSASD-IVQGWTP-----DGKILFRSNREGRPTQTNKFYTIGAEGGMPEAFDIPRA 151

Query: 212 QILFEPRFSPNQQKVAYA----------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
                   S + + +AY            Y     + +++++ +     K         +
Sbjct: 152 AFGE---ISEDNKYIAYTPITSWDAEWRNYRGGQAMPIWIVNLKTKELIKTPQLDGERHV 208

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            P +   G       ++D   +I+S +L++    ++T     ++  +   + + IV+   
Sbjct: 209 NPVW-FKGN-VYYISERDYTANIWSYNLKTKKETQITFHKKFDVK-NIDANENGIVY--- 262

Query: 322 REGKEQLYVMQSNGSDQKRI---------------SQDKEASYFDPVWSPQGDLIAFTKF 366
            E    L+++     +  +I                     +  +P  SP+G    F   
Sbjct: 263 -EQAGFLHMLNPETKETNQIIINVKGDLNYSRTRWMNVSGRNLTNPNISPKGKRAIFEYR 321

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 I  + K+    R L   S    ++P WSP G  + +   K+G+   +L   D N
Sbjct: 322 G----EIFTVPKENGTWRNLTNSSGIADRSPIWSPKGDQVAWFSDKNGE--YELVLADQN 375

Query: 425 GRNETLI--NTPAYASDPQWVG 444
           G N+  I    P +   P W  
Sbjct: 376 GNNQEFIKLPNPTFYFQPDWSP 397



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 72/185 (38%), Gaps = 13/185 (7%)

Query: 163 YQSITGEKGDFN-SRILFVSESVV----SGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           ++++T   G  + S I       V        +  L + D++G N  ++        F+P
Sbjct: 334 WRNLTNSSGIADRSPIWSPKGDQVAWFSDKNGEYELVLADQNGNNQEFIKLPNPTFYFQP 393

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---FRSMILAPRFSSNGKRALI 274
            +SPN + +AY   +      +++++    +  K   +     +  + P+FS +    + 
Sbjct: 394 DWSPNGKYIAYTDTN----FVIWIINLETKKIVKADADGFAHPNRAMNPKFSPDSDWIVY 449

Query: 275 SVQKDEAMD-IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           + Q D +   +Y+  L +    ++T+ +   I+  +      I   +  +   Q   +  
Sbjct: 450 AKQNDNSFKSVYAYQLSTQKIVQITDKIADAITPVWDASGKYIYTLASTDYGLQTGWLDM 509

Query: 334 NGSDQ 338
           +  D 
Sbjct: 510 SSYDP 514



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 70/211 (33%), Gaps = 23/211 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L     +G N   LT S D     P+FS + Q +A+    D +I  VYL+       PK
Sbjct: 41  DLWKAPINGGNAVRLT-SDDGYESSPKFSKDGQWIAFTAQYDGNI-DVYLVSIN-GGEPK 97

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAM----DIYSVDLQSNATERLTNTLFINISA 307
           R+    +  +   ++ +GK  L    ++         Y++  +    E            
Sbjct: 98  RLTYHSASDIVQGWTPDGK-ILFRSNREGRPTQTNKFYTIGAEGGMPEAFDIPRA--AFG 154

Query: 308 SYSPDSSQIVFE----------SDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             S D+  I +           + R G+   ++++     +  +  Q     + +PVW  
Sbjct: 155 EISEDNKYIAYTPITSWDAEWRNYRGGQAMPIWIVNLKTKELIKTPQLDGERHVNPVW-- 212

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
               + +         I        +E  + 
Sbjct: 213 FKGNVYYISERDYTANIWSYNLKTKKETQIT 243


>gi|20090399|ref|NP_616474.1| hypothetical protein MA1540 [Methanosarcina acetivorans C2A]
 gi|19915408|gb|AAM04954.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 618

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 106/283 (37%), Gaps = 23/283 (8%)

Query: 160 DDIYQSITGEKG----DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           D+I ++I   +      +N         +    +   L ++DRDG  ++ LT + D++  
Sbjct: 187 DEIKENILDIEWQTNLMWNPEGTKALIIMDKDPLNYQLYLIDRDGYVLQKLTDTSDRVET 246

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              +S + +K+AY+           L     +R          +++A  +S +  R    
Sbjct: 247 AI-WSNDGKKIAYSITGPNKDEETGLWIINENRTEDNRLVDNGIVIA--WSPDDSRIFYV 303

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSN 334
              D    +YS+        +L+     I+   S+SPD   ++F +  +    +++    
Sbjct: 304 ---DANSGLYSIKADGTDEVQLSTGFSRIDDVLSFSPDGKNLIFSTVNDEGVTMFLADQT 360

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G + K + +      F P WSP+GD IA  +       +  +  DGS++ L+        
Sbjct: 361 GKNAKVLEEFPGYIIFKPSWSPKGDKIAHAQDD----NLYTINPDGSEKSLIASAITDYE 416

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             W PSG  + F           ++    +G  +  +      
Sbjct: 417 --WHPSGDFISFISSDS------VFVASPDGSTKIQLTEDGDD 451



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 80/198 (40%), Gaps = 26/198 (13%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +SRI +V  +         L  +  DG +   L+    +I     FSP+ + + ++T +D
Sbjct: 297 DSRIFYVDANSG-------LYSIKADGTDEVQLSTGFSRIDDVLSFSPDGKNLIFSTVND 349

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           E +     +  +  +  K +  F   +I  P +S  G +        +  ++Y+++    
Sbjct: 350 EGV--TMFLADQTGKNAKVLEEFPGYIIFKPSWSPKGDKIA----HAQDDNLYTINPD-G 402

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-----A 347
           + + L  +   +    + P    I F S     + ++V   +GS + ++++D +     A
Sbjct: 403 SEKSLIASAITDYE--WHPSGDFISFIS----SDSVFVASPDGSTKIQLTEDGDDYRFLA 456

Query: 348 SYFDPVWSPQGDLIAFTK 365
             +   WSP G  +    
Sbjct: 457 DRYLNGWSPDGSRLLVRN 474



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 46/320 (14%), Positives = 96/320 (30%), Gaps = 94/320 (29%)

Query: 210 RDQILFEPRFSPNQQKV---AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI------ 260
           ++Q +    + P+  ++   A         L    +        + + +  S        
Sbjct: 72  KEQPIISASWGPDSSRLLVEASINSQSGASLHAIYLLNADGSGIRELTSTPSNTKEKSLG 131

Query: 261 ---------LAPRFSSNGKRA------------LISVQKD-------------------- 279
                        +S +G R              ++   D                    
Sbjct: 132 LHILENPDTQETSWSPDGNRIGIFANINAVRDFYVTANPDKTLIKTAGKCNYTTVDEIKE 191

Query: 280 ----------------EAMDIYSVDLQ------------SNATERLTNTLFINISASYSP 311
                               +  +D                  ++LT+T     +A +S 
Sbjct: 192 NILDIEWQTNLMWNPEGTKALIIMDKDPLNYQLYLIDRDGYVLQKLTDTSDRVETAIWSN 251

Query: 312 DSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           D  +I +     +++ +  L+++  N ++  R+  +         WSP    I +   + 
Sbjct: 252 DGKKIAYSITGPNKDEETGLWIINENRTEDNRLVDNG----IVIAWSPDDSRIFYVDANS 307

Query: 369 EKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             ++I   K DG+ E  L    +      ++SP G++LIFS     D G  ++  D  G+
Sbjct: 308 GLYSI---KADGTDEVQLSTGFSRIDDVLSFSPDGKNLIFSTV--NDEGVTMFLADQTGK 362

Query: 427 NETLINT-PAYASD-PQWVG 444
           N  ++   P Y    P W  
Sbjct: 363 NAKVLEEFPGYIIFKPSWSP 382



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 28/88 (31%), Gaps = 22/88 (25%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLVEDSNL---- 392
           +  KE       W P    +        +      AI ++  DGS  R L    +     
Sbjct: 69  TGIKEQPIISASWGPDSSRLLVEASINSQSGASLHAIYLLNADGSGIRELTSTPSNTKEK 128

Query: 393 -------QAP-----TWSPSGRSL-IFS 407
                  + P     +WSP G  + IF+
Sbjct: 129 SLGLHILENPDTQETSWSPDGNRIGIFA 156


>gi|116626580|ref|YP_828736.1| periplasmic component of the Tol biopolymer transporter-like
           protein [Candidatus Solibacter usitatus Ellin6076]
 gi|116229742|gb|ABJ88451.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 507

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 76/211 (36%), Gaps = 26/211 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS + + +A+ +       +  +     D +  R+    +      +S +GK      Q+
Sbjct: 293 FSRDGKLLAF-SASTPASRQSQVWLANSDGSGARLMTPPAPSYFHGWSPDGKWLAFVGQR 351

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD- 337
           D    ++ V +   A +RLT+    +    YSPD   I F SDR G   ++ M  +G+  
Sbjct: 352 DGKFTLFRVPVTGGAEQRLTSH-GYDDGPEYSPDGKWIYFNSDRSGGWDIWRMPVDGAGT 410

Query: 338 ----QKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---------KFAIGVMKKDGSQER 384
                +R++ D+   +F P +SP G  +    F               + + K  G   +
Sbjct: 411 DDAKAQRVTSDELEDWF-PHFSPNGKWMLVFSFPKGTKTHNDKMEGVKLRLFKAPGKDLK 469

Query: 385 LLV---------EDSNLQAPTWSPSGRSLIF 406
                           +   +WSP      +
Sbjct: 470 ASTPEVLQTFFGGQGTINVNSWSPDSGKFAY 500



 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 81/242 (33%), Gaps = 18/242 (7%)

Query: 188 IIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
             +    V   D       +    DQ++  P ++ + +   +   +    L    ++   
Sbjct: 215 QQRYRSKVTIYDMATKATRVVYQADQVVEAPNWTRDGK---FLMINTGGSLYRIPVNPAG 271

Query: 247 DRAPKRIGNFRSM---ILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTL 301
           +   ++I              FS +GK    S          ++  +   +   RL    
Sbjct: 272 ETKAEKIELGDGGYRCNNDHDFSRDGKLLAFSASTPASRQSQVWLANSDGSGA-RLMTPP 330

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +    +SPD   + F   R+GK  L+ +   G  ++R++         P +SP G  I
Sbjct: 331 APSYFHGWSPDGKWLAFVGQRDGKFTLFRVPVTGGAEQRLTSHGYDD--GPEYSPDGKWI 388

Query: 362 AFTKFSGEKFAIGVMKKDGSQE------RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            F       + I  M  DG+        R+  ++     P +SP+G+ ++      G   
Sbjct: 389 YFNSDRSGGWDIWRMPVDGAGTDDAKAQRVTSDELEDWFPHFSPNGKWMLVFSFPKGTKT 448

Query: 416 SK 417
             
Sbjct: 449 HN 450



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 91/236 (38%), Gaps = 25/236 (10%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           Q+  A         + +Y M T+     + +     ++ AP ++ +GK  +I    +   
Sbjct: 208 QRGPAAPQQRYRSKVTIYDMATKA---TRVVYQADQVVEAPNWTRDGKFLMI----NTGG 260

Query: 283 DIYSVDLQSNATER-----LTNTLFI-NISASYSPDSSQIVFESD--REGKEQLYVMQSN 334
            +Y + +      +     L +  +  N    +S D   + F +      + Q+++  S+
Sbjct: 261 SLYRIPVNPAGETKAEKIELGDGGYRCNNDHDFSRDGKLLAFSASTPASRQSQVWLANSD 320

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           GS  + ++    A  +   WSP G  +AF      KF +  +   G  E+ L        
Sbjct: 321 GSGARLMTP--PAPSYFHGWSPDGKWLAFVGQRDGKFTLFRVPVTGGAEQRLTSHGYDDG 378

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG------RNETLINTPAYASDPQWVG 444
           P +SP G+ + F+  + G  G  ++ + ++G      + + + +       P +  
Sbjct: 379 PEYSPDGKWIYFNSDRSG--GWDIWRMPVDGAGTDDAKAQRVTSDELEDWFPHFSP 432



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 77/228 (33%), Gaps = 26/228 (11%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                +        L    +      ++ + + + DG+  R +TP          +SP+ 
Sbjct: 285 YRCNNDHDFSRDGKLLAFSASTPASRQSQVWLANSDGSGARLMTPPAPSYFHG--WSPDG 342

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +A+    D       +  T    A +R+ +       P +S +GK    +  +    D
Sbjct: 343 KWLAFVGQRDGKFTLFRVPVT--GGAEQRLTSH-GYDDGPEYSPDGKWIYFNSDRSGGWD 399

Query: 284 IYSVDLQSN-----ATERLTNTLFINISASYSPDSSQIVFESDREGKE---------QLY 329
           I+ + +          +R+T+    +    +SP+   ++  S  +G +         +L 
Sbjct: 400 IWRMPVDGAGTDDAKAQRVTSDELEDWFPHFSPNGKWMLVFSFPKGTKTHNDKMEGVKLR 459

Query: 330 VMQSNGSDQK-------RISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           + ++ G D K       +     + +     WSP     A+  F    
Sbjct: 460 LFKAPGKDLKASTPEVLQTFFGGQGTINVNSWSPDSGKFAYVVFEPMN 507



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 67/172 (38%), Gaps = 17/172 (9%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV-MQSNGS---DQKRI 341
             D+ + AT  +     +  + +++ D     F     G     + +   G    ++  +
Sbjct: 224 IYDMATKATRVVYQADQVVEAPNWTRDGK---FLMINTGGSLYRIPVNPAGETKAEKIEL 280

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                    D  +S  G L+AF+  +    +  + +   DGS  RL+   +      WSP
Sbjct: 281 GDGGYRCNNDHDFSRDGKLLAFSASTPASRQSQVWLANSDGSGARLMTPPAPSYFHGWSP 340

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGF 445
            G+ L F  ++DG     L+ + + G  E  + +      P Y+ D +W+ F
Sbjct: 341 DGKWLAFVGQRDGKFT--LFRVPVTGGAEQRLTSHGYDDGPEYSPDGKWIYF 390



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 11/121 (9%)

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQA 394
           +   R+    +     P W+  G  +      G  + I V    +   E++ + D   + 
Sbjct: 229 TKATRVVYQADQVVEAPNWTRDGKFL-MINTGGSLYRIPVNPAGETKAEKIELGDGGYRC 287

Query: 395 P---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP------AYASDPQWVGF 445
                +S  G+ L FS        S+++  + +G    L+  P       ++ D +W+ F
Sbjct: 288 NNDHDFSRDGKLLAFSASTPASRQSQVWLANSDGSGARLMTPPAPSYFHGWSPDGKWLAF 347

Query: 446 M 446
           +
Sbjct: 348 V 348


>gi|301511542|ref|ZP_07236779.1| translocation protein TolB [Acinetobacter baumannii AB058]
          Length = 167

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 8/156 (5%)

Query: 25  GGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ 84
               PT+  A + +    A      IA   F + + L      +V  DL RS  F   S+
Sbjct: 18  SPLAPTAAFAQLHLEIAKAPDQAPKIAIVPFNNDNGL----YPIVETDLNRSGRFTSSSK 73

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
           +          +  +  DW + G   +VTG++ +       V ++L+DV+ ++ ++ +  
Sbjct: 74  NL---PANAAINQIQASDWQAAGIPYVVTGQIKQTADG-FEVHYQLYDVQKQQYLLNELL 129

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
               +  R+  H +SD IYQ++TG  GDF+ RI +V
Sbjct: 130 NVPASRIRQAGHMVSDAIYQALTGIPGDFSGRIAYV 165


>gi|294497404|ref|YP_003561104.1| putative peptidase [Bacillus megaterium QM B1551]
 gi|294347341|gb|ADE67670.1| putative peptidase [Bacillus megaterium QM B1551]
          Length = 659

 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 88/255 (34%), Gaps = 48/255 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDT----RIDRAPKRIGNFRSMILAPRFSSNG 269
           ++ P+ SP+++ V Y   + + I   Y           +  K++  ++    +P +S +G
Sbjct: 20  VYNPQISPDRKSVVYTVRETKKIENAYETQLFMLDLETKETKQLTYYKGNNHSPVWSPDG 79

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---------- 319
           K       + +A+ +Y +       E LT+      +  +SP S +I+F           
Sbjct: 80  KWIAFLSDRSQAVQLYLLAATGGEAEALTDLEKGVSNPVWSPYSDEIMFSTKVGEKAVRV 139

Query: 320 ------------------SDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                             SD  G        + V++    +   ++ D    +    WSP
Sbjct: 140 EQNHEHPQPYEVERLLYKSDVSGYLKGEYTHVAVVKLKNKEVTFLT-DGPYHHSVGCWSP 198

Query: 357 QGDLIAFTKFSGEK------FAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFS-- 407
             + I F    GE         + ++ +D  +   +  E       +WSP G  + +   
Sbjct: 199 DANSIVFCSSRGENPDLSLTMDVFILHRDTKKVTSITAETGYFHQVSWSPDGSYIAYIGN 258

Query: 408 -RKKDGDTGSKLYSI 421
            R     + + +Y  
Sbjct: 259 ERTYGSASMNDIYIY 273



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 10/108 (9%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVE-DSNLQAPTWSPS 400
           S ++P  SP    + +T    +K        + ++  +  + + L     N  +P WSP 
Sbjct: 19  SVYNPQISPDRKSVVYTVRETKKIENAYETQLFMLDLETKETKQLTYYKGNNHSPVWSPD 78

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVGFMD 447
           G+ + F   +      +LY +   G   E L +     S+P W  + D
Sbjct: 79  GKWIAFLSDRS--QAVQLYLLAATGGEAEALTDLEKGVSNPVWSPYSD 124



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 35/72 (48%), Gaps = 11/72 (15%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLIN-------TP 434
           L E  ++  P  SP  +S++++ ++    +    ++L+ +DL  +    +        +P
Sbjct: 14  LYELKSVYNPQISPDRKSVVYTVRETKKIENAYETQLFMLDLETKETKQLTYYKGNNHSP 73

Query: 435 AYASDPQWVGFM 446
            ++ D +W+ F+
Sbjct: 74  VWSPDGKWIAFL 85


>gi|162454268|ref|YP_001616635.1| protein kinase [Sorangium cellulosum 'So ce 56']
 gi|161164850|emb|CAN96155.1| Protein kinase [Sorangium cellulosum 'So ce 56']
          Length = 1515

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 97/263 (36%), Gaps = 13/263 (4%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              +V+     ++ V + DG     +    +  +F   +SP+ + +   + D      V +
Sbjct: 1195 RRIVTASEDRTVRVRNADGTGTPLILRGHEGRIFSATWSPDGKHIVTTSED----YTVRV 1250

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                    P  +      +    +S +G+R + S   D    I++ D  +     L    
Sbjct: 1251 WSADGTGTPLILRGHHERVNFAAWSPDGRRIV-SASDDLTARIWNAD-GTGEPLVLRGHE 1308

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +   AS+SPDS ++V  S         V  ++G+ +  +    EA      WSP G  +
Sbjct: 1309 LLVKYASWSPDSRRVVTASY---DNTARVWNADGTGEPVVIARHEAFLSAAEWSPDGKRV 1365

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              T  + +   +  +   G    L   D+++    WS  G+ ++ + +   D  ++++S 
Sbjct: 1366 V-TASTDKTARVWNVDGSGEPVILAGHDNDVLRAVWSADGKRILTASR---DGTARIWSA 1421

Query: 422  DLNGRNETLINTPAYASDPQWVG 444
            D  G    L          +W  
Sbjct: 1422 DGKGEPLILRGHAEPVYSAEWSP 1444



 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 103/271 (38%), Gaps = 20/271 (7%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S  +++     +  V + DG     +       +    +SP+ + +  A++D  +  RV+
Sbjct: 977  SRRILTASRDETARVWNADGTGEPIVLRGHRGWVAAGAWSPDGRHIVTASWD--NTARVW 1034

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-------NA 293
              D   +     I      +    +S +GKR + +  +D    +++ D          + 
Sbjct: 1035 NADGTGEPLVFNI-EQGGDVYWAAWSPDGKRIV-TASEDGRARVWNADGTGEPIVLSPHG 1092

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              RL+ T  ++   ++SPD  +I+     +  +++++  ++G+    +    +   F   
Sbjct: 1093 LLRLSTTYLLST--TFSPDGRRILAT---DWDKKVWLWNADGTGDPVVLHGHQNVVFVAA 1147

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            WSP G  IA   + G    +       S   +   ++ + A  WSP GR ++ + +   D
Sbjct: 1148 WSPDGRHIASGSWDGTA-RVWSADLQSSPPVIGDHEAAVAAAAWSPDGRRIVTASE---D 1203

Query: 414  TGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               ++ + D  G    L           W  
Sbjct: 1204 RTVRVRNADGTGTPLILRGHEGRIFSATWSP 1234



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/313 (19%), Positives = 112/313 (35%), Gaps = 32/313 (10%)

Query: 146  SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-----CVMDRDG 200
              P  W  +   +   ++ SI+      +SRI  V+ S     I  +       V   DG
Sbjct: 856  GVPRGWSDL---VFSALHGSISSVVLRHSSRISSVAWSPDGARIATACDDRAARVWRADG 912

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                 +    D+ ++   +SP+ + +A A+ D        + +      P  +   R +I
Sbjct: 913  TGEPLVLRGHDETVYSVAWSPDGKHIATASSDK----TARVWNADGTGEPIVLRGHRDVI 968

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                +S + +R L +  +DE   +++ D  +     L        + ++SPD   IV  S
Sbjct: 969  QLVAYSPDSRRIL-TASRDETARVWNAD-GTGEPIVLRGHRGWVAAGAWSPDGRHIVTAS 1026

Query: 321  DREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                     V  ++G+ +  +   ++    +   WSP G  I      G      V   D
Sbjct: 1027 ---WDNTARVWNADGTGEPLVFNIEQGGDVYWAAWSPDGKRIVTASEDGRA---RVWNAD 1080

Query: 380  GSQERLL--------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            G+ E ++        +  + L + T+SP GR ++     D D    L++ D  G    L 
Sbjct: 1081 GTGEPIVLSPHGLLRLSTTYLLSTTFSPDGRRIL---ATDWDKKVWLWNADGTGDPVVLH 1137

Query: 432  NTPAYASDPQWVG 444
                      W  
Sbjct: 1138 GHQNVVFVAAWSP 1150



 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 92/263 (34%), Gaps = 27/263 (10%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            V+     ++ V   DG     +     + +    +SP+ +++  A+ D    L   + + 
Sbjct: 1240 VTTSEDYTVRVWSADGTGTPLILRGHHERVNFAAWSPDGRRIVSASDD----LTARIWNA 1295

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 P  +     ++    +S + +R +++   D    +++ D  +     +       
Sbjct: 1296 DGTGEPLVLRGHELLVKYASWSPDSRR-VVTASYDNTARVWNAD-GTGEPVVIARHEAFL 1353

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             +A +SPD  ++V  S     +   V   +GS +  I    +      VWS  G  I   
Sbjct: 1354 SAAEWSPDGKRVVTAST---DKTARVWNVDGSGEPVILAGHDNDVLRAVWSADGKRILTA 1410

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSID 422
               G      +   DG  E L++        +  WSP GR +I +              D
Sbjct: 1411 SRDGTA---RIWSADGKGEPLILRGHAEPVYSAEWSPDGRRVITAS------------AD 1455

Query: 423  LNGRNETLINTPAYASDPQ-WVG 444
               R  T +  P    DP+ W+ 
Sbjct: 1456 GTARVWTDLEVPRGPDDPKLWLA 1478



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 77/188 (40%), Gaps = 9/188 (4%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              +VS     +  + + DG     +    + ++    +SP+ ++V  A+YD+       +
Sbjct: 1279 RRIVSASDDLTARIWNADGTGEPLVLRGHELLVKYASWSPDSRRVVTASYDN----TARV 1334

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +      P  I    + + A  +S +GKR +++   D+   +++VD  S     L    
Sbjct: 1335 WNADGTGEPVVIARHEAFLSAAEWSPDGKR-VVTASTDKTARVWNVD-GSGEPVILAGHD 1392

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               + A +S D  +I+  + R+G  +++   ++G  +  I +      +   WSP G  +
Sbjct: 1393 NDVLRAVWSADGKRIL-TASRDGTARIW--SADGKGEPLILRGHAEPVYSAEWSPDGRRV 1449

Query: 362  AFTKFSGE 369
                  G 
Sbjct: 1450 ITASADGT 1457



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 62/150 (41%), Gaps = 7/150 (4%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S  VV+    N+  V + DG     +    +  L    +SP+ ++V  A+ D        
Sbjct: 1320 SRRVVTASYDNTARVWNADGTGEPVVIARHEAFLSAAEWSPDGKRVVTASTDK----TAR 1375

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + +      P  +    + +L   +S++GKR L +  +D    I+S D +      L   
Sbjct: 1376 VWNVDGSGEPVILAGHDNDVLRAVWSADGKRIL-TASRDGTARIWSADGKGEPLI-LRGH 1433

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYV 330
                 SA +SPD  +++  +  +G  +++ 
Sbjct: 1434 AEPVYSAEWSPDGRRVI-TASADGTARVWT 1462


>gi|284037589|ref|YP_003387519.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
 gi|283816882|gb|ADB38720.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
          Length = 660

 Score =  122 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 90/260 (34%), Gaps = 41/260 (15%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNG 269
           +  P+ SP+ Q VAY           Y  D  +         ++ N +    +P +S +G
Sbjct: 34  VSNPKISPDGQWVAYTLTRTNWDENSYDTDIWLVNIQTGNRFQLTNSKKSNNSPAWSPDG 93

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---------- 319
           K       +D+   +Y +         ++       +  +SP+  QIVF           
Sbjct: 94  KWLAFLSTRDDKPQLYLISPSGGEARAISKFETGVTAFRWSPNGKQIVFTATVPDAKPDK 153

Query: 320 ------SDREGKEQLYVM----------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                 SD E     Y M              +  K +++ K+ S  + V SP G  IA+
Sbjct: 154 ERKEKYSDYEVVRDDYKMVHLYLIDSLFNEKPASAKPLTRGKDFSVGNFVVSPDGKKIAY 213

Query: 364 TK------FSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD--- 413
                    +G    + V+   D    +++      Q P WSP G+ + F    + +   
Sbjct: 214 DAARNPDLINGHTSDLYVLTLGDTISRKIVSLKGPDQDPVWSPDGKQIAFVTANENEFYF 273

Query: 414 -TGSKLYSIDLNGRNETLIN 432
            T   + ++   G   T++ 
Sbjct: 274 YTNRLIATVPATGGTPTMLT 293



 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 45/225 (20%), Positives = 89/225 (39%), Gaps = 40/225 (17%)

Query: 259 MILAPRFSSNGKRALISVQKDEA------MDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +  P+ S +G+    ++ +          DI+ V++Q+    +LTN+   N S ++SPD
Sbjct: 33  SVSNPKISPDGQWVAYTLTRTNWDENSYDTDIWLVNIQTGNRFQLTNSKKSNNSPAWSPD 92

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------- 364
              + F S R+ K QLY++  +G + + IS+  E       WSP G  I FT        
Sbjct: 93  GKWLAFLSTRDDKPQLYLISPSGGEARAISK-FETGVTAFRWSPNGKQIVFTATVPDAKP 151

Query: 365 --------------KFSGEKFAIGVMK------KDGSQERLLVEDSNLQAPTWSPSGRSL 404
                         +   +   + ++          ++     +D ++     SP G+ +
Sbjct: 152 DKERKEKYSDYEVVRDDYKMVHLYLIDSLFNEKPASAKPLTRGKDFSVGNFVVSPDGKKI 211

Query: 405 IFSRKKDGDT----GSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
            +   ++ D      S LY + L +  +  +++      DP W  
Sbjct: 212 AYDAARNPDLINGHTSDLYVLTLGDTISRKIVSLKGPDQDPVWSP 256



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 58/309 (18%), Positives = 115/309 (37%), Gaps = 57/309 (18%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 + +++    N   LT S+      P +SP+ + +A+ +  D+      +  +  
Sbjct: 58  NSYDTDIWLVNIQTGNRFQLTNSKKS-NNSPAWSPDGKWLAFLSTRDDKPQLYLI--SPS 114

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------------KDEAMDIYS 286
               + I  F + + A R+S NGK+ + +                      +D+   ++ 
Sbjct: 115 GGEARAISKFETGVTAFRWSPNGKQIVFTATVPDAKPDKERKEKYSDYEVVRDDYKMVHL 174

Query: 287 VDLQS------NATERLTNTLFINISAS-YSPDSSQIVFESDR------EGKEQLYVMQS 333
             + S       + + LT     ++     SPD  +I +++ R           LYV+  
Sbjct: 175 YLIDSLFNEKPASAKPLTRGKDFSVGNFVVSPDGKKIAYDAARNPDLINGHTSDLYVLTL 234

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLV 387
             +  ++I   K     DPVWSP G  IAF   +  +F       I  +   G    +L 
Sbjct: 235 GDTISRKIVSLK-GPDQDPVWSPDGKQIAFVTANENEFYFYTNRLIATVPATGGTPTMLT 293

Query: 388 EDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--------AYA 437
              +  A    W+P G  ++FS  +   T S L+ +D   +    +  P        +++
Sbjct: 294 NTFDENANLLDWTPDG--ILFSGYQ--KTSSHLFRLDPATQKTERLTKPDNLIATQFSFS 349

Query: 438 SDPQWVGFM 446
            D + + F+
Sbjct: 350 KDGRQMAFV 358



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 80/226 (35%), Gaps = 24/226 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD----TRIDRAPKRIGNF 256
           A+ + LT  +D  +     SP+ +K+AY    + D++  +  D    T  D   ++I + 
Sbjct: 186 ASAKPLTRGKDFSVGNFVVSPDGKKIAYDAARNPDLINGHTSDLYVLTLGDTISRKIVSL 245

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYS------VDLQSNATERLTNTLFINISA-SY 309
           +     P +S +GK+       +     Y+      V         LTNT   N +   +
Sbjct: 246 KGPDQDPVWSPDGKQIAFVTANENEFYFYTNRLIATVPATGGTPTMLTNTFDENANLLDW 305

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +PD   I+F   ++    L+ +       +R+++          +S  G  +AF      
Sbjct: 306 TPDG--ILFSGYQKTSSHLFRLDPATQKTERLTKPDNLIATQFSFSKDGRQMAFVGAMPN 363

Query: 370 KF-AIGVMKKDGSQERLLVEDSNLQAP---------TW-SPSGRSL 404
            +  I          R L +      P         +W S  G  +
Sbjct: 364 TYAEIQTSSVQAFSPRTLTDMGAQVTPFKMSTREVISWKSADGNMI 409


>gi|255531799|ref|YP_003092171.1| amidohydrolase [Pedobacter heparinus DSM 2366]
 gi|255344783|gb|ACU04109.1| amidohydrolase [Pedobacter heparinus DSM 2366]
          Length = 1084

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 84/198 (42%), Gaps = 25/198 (12%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +GK  +  +  D    +Y + +   +   L++    +I   +SP+   I + SD+ G
Sbjct: 57  VSPDGKDIVFDLLGD----LYIMPISGGSAVLLSSGPAWDIQPRFSPNGRYISYTSDKSG 112

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL-IAFTKFSGEKF----AIGVMKKD 379
            + +++M  +GS +++IS++      +  W P  +  IA   F+G +      + +    
Sbjct: 113 ADNIWIMNRDGSGKRQISKETFRLLNNATWMPNSEYLIARKHFTGTRSLGAGEMWMYSIY 172

Query: 380 GSQERLLV----EDSNLQAPTWSPSGRSLIFSRK--------KDGDTGSKLYSI---DLN 424
           G +   L     +  +   P  SP G+ L FS             D    +Y+I   DL 
Sbjct: 173 GGEGVQLTKRKNDQQDAGEPNVSPDGKYLYFSEDMSPGPNFEYSKDPNGMIYAIRQLDLT 232

Query: 425 -GRNETLINTPAYASDPQ 441
            G+  +LI  P  A+ PQ
Sbjct: 233 SGKITSLIAQPGGAARPQ 250



 Score = 96.6 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 91/234 (38%), Gaps = 28/234 (11%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             G    +   + +        SP+ + + +    D  I+ +         +   + +  
Sbjct: 36  YKGNTKTFTFNTDEGTWMNLDVSPDGKDIVFDLLGDLYIMPI------SGGSAVLLSSGP 89

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQI 316
           +  + PRFS NG+    +  K  A +I+ ++   +   +++   F +  +A++ P+S  +
Sbjct: 90  AWDIQPRFSPNGRYISYTSDKSGADNIWIMNRDGSGKRQISKETFRLLNNATWMPNSEYL 149

Query: 317 V----FESDRE-GKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKF--- 366
           +    F   R  G  ++++    G +  ++++ K       +P  SP G  + F++    
Sbjct: 150 IARKHFTGTRSLGAGEMWMYSIYGGEGVQLTKRKNDQQDAGEPNVSPDGKYLYFSEDMSP 209

Query: 367 ----------SGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRK 409
                     +G  +AI  +     +   L+ +      P  SP G+ + + ++
Sbjct: 210 GPNFEYSKDPNGMIYAIRQLDLTSGKITSLIAQPGGAARPQVSPDGKMMAYVKR 263



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 72/198 (36%), Gaps = 20/198 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + V +      +           +  P+R+         P  S++GK  + +   D
Sbjct: 370 SADGKFVVF------NAAGFLYKKDLPNGLPERVSKGIDFEFEPEISADGKSVIYTTWSD 423

Query: 280 EA-MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----SDREG-----KEQLY 329
           E    I   DL+S  T  LT       S S+S    +IVF     +D  G        ++
Sbjct: 424 EFKGAIKKTDLKSGKTVTLTTEKGFYYSPSFSNKGDKIVFRKGVGNDVLGYAFGRGTGIF 483

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            M ++G  +  I+++       P ++     I F      K A   +  +G+ ER     
Sbjct: 484 TMPASGGPKTLITENG----IRPKFNADDSRIYFQSSEDGKKAFKSIDLNGANERTHYTS 539

Query: 390 SNLQAPTWSPSGRSLIFS 407
           +       SP G+ + F+
Sbjct: 540 TYATQFAPSPDGKWMAFT 557



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 72/225 (32%), Gaps = 30/225 (13%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +  F+    ++S +       N + +M+RDG+  R ++    ++L    + PN + + 
Sbjct: 92  DIQPRFSPNGRYISYTSDKSGADN-IWIMNRDGSGKRQISKETFRLLNNATWMPNSEYLI 150

Query: 228 YATYDDE------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS------ 275
              +           + +Y +         +  N +     P  S +GK    S      
Sbjct: 151 ARKHFTGTRSLGAGEMWMYSIYGGEGVQLTKRKNDQQDAGEPNVSPDGKYLYFSEDMSPG 210

Query: 276 ----VQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                 KD    IY++   DL S     L            SPD   + +      K  L
Sbjct: 211 PNFEYSKDPNGMIYAIRQLDLTSGKITSLIAQPGGAARPQVSPDGKMMAYVKRMRLKSVL 270

Query: 329 YVMQSNGSDQ----------KRISQDKEASYFDPVWSPQGDLIAF 363
            +      ++          ++ +      Y +  W+P G  I F
Sbjct: 271 VLQNLQTGEEWPIYEDLSHDQQETWAIFGVYPNYAWTPDGKSIIF 315



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 97/276 (35%), Gaps = 56/276 (20%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRV--YLMDTRIDRAPKRIGNFRSMILA-----P--RFS 266
            P+ SP+ + +AY        + V   L         + + + +    A     P   ++
Sbjct: 248 RPQVSPDGKMMAYVKRMRLKSVLVLQNLQTGEEWPIYEDLSHDQQETWAIFGVYPNYAWT 307

Query: 267 SNGKRALISVQKDEAMDIYSVDLQS----NATERLTNTLFINISASY------------- 309
            +GK  +   +      I  +DL S    N    +T +  I  +  Y             
Sbjct: 308 PDGKSIIFYARG----KIKKIDLNSLFTNNLPFHVTGSQTIQQALHYQQQVFSNDFTVKM 363

Query: 310 ------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                 S D   +VF +       LY         +R+S+  +   F+P  S  G  + +
Sbjct: 364 IRQLNTSADGKFVVFNA----AGFLYKKDLPNGLPERVSKGID-FEFEPEISADGKSVIY 418

Query: 364 TKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD------- 413
           T +S E F   + K D   G    L  E     +P++S  G  ++F +    D       
Sbjct: 419 TTWSDE-FKGAIKKTDLKSGKTVTLTTEKGFYYSPSFSNKGDKIVFRKGVGNDVLGYAFG 477

Query: 414 TGSKLYSIDLNGRNETLINTPA----YASDPQWVGF 445
            G+ ++++  +G  +TLI        + +D   + F
Sbjct: 478 RGTGIFTMPASGGPKTLITENGIRPKFNADDSRIYF 513



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 94/314 (29%), Gaps = 55/314 (17%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD--QILFEPRFSPNQQKVAY------ 228
           I     +    +    + +    G     LT  ++  Q   EP  SP+ + + +      
Sbjct: 150 IARKHFTGTRSLGAGEMWMYSIYGGEGVQLTKRKNDQQDAGEPNVSPDGKYLYFSEDMSP 209

Query: 229 -----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
                 + D   ++               +         P+ S +GK      +      
Sbjct: 210 GPNFEYSKDPNGMIYAIRQLDLTSGKITSLIAQPGGAARPQVSPDGKMMAYVKRMRLKSV 269

Query: 284 IYSVDLQSNATERLTNTLFIN---------ISAS--YSPDSSQIVFESDREGKEQLYVMQ 332
           +   +LQ+     +   L  +         +  +  ++PD   I+F +    + ++  + 
Sbjct: 270 LVLQNLQTGEEWPIYEDLSHDQQETWAIFGVYPNYAWTPDGKSIIFYA----RGKIKKID 325

Query: 333 SN------------GSDQKRISQDKEASYFDPVW----------SPQGDLIAFTKFSGEK 370
            N            GS   + +   +   F   +          S  G  + F   +   
Sbjct: 326 LNSLFTNNLPFHVTGSQTIQQALHYQQQVFSNDFTVKMIRQLNTSADGKFVVF---NAAG 382

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNET 429
           F       +G  ER+         P  S  G+S+I++   D +    +   DL +G+  T
Sbjct: 383 FLYKKDLPNGLPERVSKGIDFEFEPEISADGKSVIYTTWSD-EFKGAIKKTDLKSGKTVT 441

Query: 430 LINTPAYASDPQWV 443
           L     +   P + 
Sbjct: 442 LTTEKGFYYSPSFS 455



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 70/235 (29%), Gaps = 35/235 (14%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V  +  S   K ++   D        LT  +    + P FS    K+ +      + +  
Sbjct: 416 VIYTTWSDEFKGAIKKTDLKSGKTVTLTTEK-GFYYSPSFSNKGDKIVF-RKGVGNDVLG 473

Query: 240 YLMDTRIDRAPKRIGNFRSMILA-----PRFSSNGKRALISVQKDEAMDIYSVDLQS-NA 293
           Y                   ++      P+F+++  R      +D      S+DL   N 
Sbjct: 474 YAFGRGTGIFTMPASGGPKTLITENGIRPKFNADDSRIYFQSSEDGKKAFKSIDLNGANE 533

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS----------NGSDQKRISQ 343
               T+T     +   SPD   + F         +YV              G+    +++
Sbjct: 534 RTHYTSTYATQFAP--SPDGKWMAFT----ELFNIYVTPMVTTGRPLDLSAGNKTIPLTR 587

Query: 344 DKEASYFDPVWSPQGDLI-------AFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             + +     WS   + +        F++     F       DGS  ++   DS 
Sbjct: 588 ITKDAGTYIHWSHDSNKLFWTLGEQYFSRDVKTAFNF----TDGSTAQIKAPDST 638



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 7/78 (8%)

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            +++ I   K +        ++        SP G+ ++F      D    LY + ++G +
Sbjct: 28  DKQWDIEKYKGNTKTFTFNTDEGTWMNLDVSPDGKDIVF------DLLGDLYIMPISGGS 81

Query: 428 ETLINT-PAYASDPQWVG 444
             L+++ PA+   P++  
Sbjct: 82  AVLLSSGPAWDIQPRFSP 99


>gi|256379057|ref|YP_003102717.1| amidohydrolase [Actinosynnema mirum DSM 43827]
 gi|255923360|gb|ACU38871.1| amidohydrolase [Actinosynnema mirum DSM 43827]
          Length = 1031

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 78/195 (40%), Gaps = 12/195 (6%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D+ +  A +R        +    S +G+   I    D    I+ +         LT+  
Sbjct: 35  QDSELSGALRRFTATEGTNITAALSPDGRTIAI----DLYTRIWLLPASGGRARPLTDPE 90

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  +SPD   +VF+S R+G   L+ +  +G   +R +      + +P +SP G  I
Sbjct: 91  QDATRPHFSPDGRSLVFQSYRDGNYHLWTIGVDGRGLRRRTS-GPTDHREPRFSPDGRAI 149

Query: 362 AFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLY 419
           A++  +G + + + ++     +   L    N    P +S  GR L+ +       G+ + 
Sbjct: 150 AYSGDAGADGYHLWLLDLATGRTTRLTTGPNDDGEPVFSADGRHLVCTAD-----GAAID 204

Query: 420 SIDLNGRNETLINTP 434
            I L+G   T +  P
Sbjct: 205 RITLDGGARTRLVQP 219



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 51/251 (20%), Positives = 88/251 (35%), Gaps = 41/251 (16%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  P  SPN ++VA+            L    +D  P+ + +  S    P +  +G   +
Sbjct: 324 IASPVLSPNGREVAFRALGA-------LWLLPLDGEPRALVDDGSFASDPDWRPDGSALV 376

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +  +     ++  DL + A  RLT+     ++   +PD  +I F+ D +G         
Sbjct: 377 YTSDRTGTPALWRHDLATGADTRLTDLPGAQLTPRIAPDGERIAFQ-DADGA----TWVL 431

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFSGEKFAIGVMKKDGSQERLL 386
           +     ++          P WSP G  +A         ++      I  +  D  + R  
Sbjct: 432 SDGVATQVLPALFQP-GRPTWSPDGRTLALAAVKPLSRRYREGTNQILTVALDTGEVRYA 490

Query: 387 -------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR------NETLINT 433
                  +       P WSP GR L F         S L+ + ++GR         +   
Sbjct: 491 EPLPGKSLSTRGDDGPVWSPDGRWLAFV------VESALWVVPVDGRGALTGDPRRIAAG 544

Query: 434 PAYASDPQWVG 444
           PA A  P W G
Sbjct: 545 PADA--PSWSG 553



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 83/214 (38%), Gaps = 29/214 (13%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++ G  + +  +P  S NG+      +   A+ +  +D        L +         + 
Sbjct: 316 RKSGPVKGIA-SPVLSPNGREVAF--RALGALWLLPLD---GEPRALVDDGSFASDPDWR 369

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD S +V+ SDR G   L+          R++ D   +   P  +P G+ IAF    G  
Sbjct: 370 PDGSALVYTSDRTGTPALWRHDLATGADTRLT-DLPGAQLTPRIAPDGERIAFQDADGAT 428

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS-----RKKDGDTGSKLYSIDLNG 425
           + +     DG   ++L        PTWSP GR+L  +      ++  +  +++ ++ L+ 
Sbjct: 429 WVL----SDGVATQVLPALFQPGRPTWSPDGRTLALAAVKPLSRRYREGTNQILTVALDT 484

Query: 426 RNETLI-------------NTPAYASDPQWVGFM 446
                              + P ++ D +W+ F+
Sbjct: 485 GEVRYAEPLPGKSLSTRGDDGPVWSPDGRWLAFV 518



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 69/400 (17%), Positives = 125/400 (31%), Gaps = 54/400 (13%)

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
           G  +  +      R+ +    +          PD       +      ++V GRV+   +
Sbjct: 200 GAAIDRITLDGGARTRLVQPTTGTRVLAPGLTPDGRLVHTAFAGPTTSLVVDGRVVSADE 259

Query: 122 DRL---------------RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           D                     R+ D+          F ++      +    +  + +  
Sbjct: 260 DLFGSSPQWLGAALLHTADGGLRVRDLTTGAT-RAIPFEATVEHTPHVDRPAARPVDRKS 318

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
              KG   S +L  +   V+     +L ++  DG     +         +P + P+   +
Sbjct: 319 GPVKGI-ASPVLSPNGREVAFRALGALWLLPLDGEPRALVDDGS--FASDPDWRPDGSAL 375

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y + D      ++  D        R+ +     L PR + +G+R       D A  +  
Sbjct: 376 VYTS-DRTGTPALWRHDLATGADT-RLTDLPGAQLTPRIAPDGERIAFQ-DADGATWV-- 430

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFES-------DREGKEQLYVMQSNGSDQK 339
             L      ++   LF     ++SPD   +   +        REG  Q+  +  +  + +
Sbjct: 431 --LSDGVATQVLPALFQPGRPTWSPDGRTLALAAVKPLSRRYREGTNQILTVALDTGEVR 488

Query: 340 RISQDKEASYF-----DPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-----SQERLLVED 389
                   S        PVWSP G  +AF   S    A+ V+  DG        R +   
Sbjct: 489 YAEPLPGKSLSTRGDDGPVWSPDGRWLAFVVES----ALWVVPVDGRGALTGDPRRIAAG 544

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
               AP+WS   +SL+            L    LNGR   
Sbjct: 545 PAD-APSWSGDSKSLLHLEN------GVLVRTGLNGRARR 577



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 56/341 (16%), Positives = 113/341 (33%), Gaps = 74/341 (21%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +  T  +G   +  L      ++  +   + ++   G   R LT   +Q    P FSP+ 
Sbjct: 44  RRFTATEGTNITAALSPDGRTIAIDLYTRIWLLPASGGRARPLTD-PEQDATRPHFSPDG 102

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAM 282
           + + + +Y D +   ++ +        +R  +  +    PRFS +G+    S     +  
Sbjct: 103 RSLVFQSYRDGN-YHLWTIGVDGRGLRRR-TSGPTDHREPRFSPDGRAIAYSGDAGADGY 160

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++ +DL +  T RLT     +    +S D   +V  +D      +  +  +G  + R+ 
Sbjct: 161 HLWLLDLATGRTTRLTTGPNDDGEPVFSADGRHLVCTAD---GAAIDRITLDGGARTRLV 217

Query: 343 QDKEAS-YFDPVWSPQGDLI----------------------------------AFTKFS 367
           Q    +    P  +P G L+                                  A    +
Sbjct: 218 QPTTGTRVLAPGLTPDGRLVHTAFAGPTTSLVVDGRVVSADEDLFGSSPQWLGAALLHTA 277

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQA------------------------PTWSPSGRS 403
                + V        R +  ++ ++                         P  SP+GR 
Sbjct: 278 DGG--LRVRDLTTGATRAIPFEATVEHTPHVDRPAARPVDRKSGPVKGIASPVLSPNGRE 335

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           + F           L+ + L+G    L++  ++ASDP W  
Sbjct: 336 VAF------RALGALWLLPLDGEPRALVDDGSFASDPDWRP 370



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 8/156 (5%)

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           S A  R T T   NI+A+ SPD   I      +   +++++ ++G   + ++ D E    
Sbjct: 40  SGALRRFTATEGTNITAALSPDGRTIA----IDLYTRIWLLPASGGRARPLT-DPEQDAT 94

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRK 409
            P +SP G  + F  +    + +  +  DG   R      ++ + P +SP GR++ +S  
Sbjct: 95  RPHFSPDGRSLVFQSYRDGNYHLWTIGVDGRGLRRRTSGPTDHREPRFSPDGRAIAYSGD 154

Query: 410 KDGDTGSKLYSIDLN-GRNETLINTPAYASDPQWVG 444
              D G  L+ +DL  GR   L   P    +P +  
Sbjct: 155 AGAD-GYHLWLLDLATGRTTRLTTGPNDDGEPVFSA 189


>gi|120434675|ref|YP_860364.1| WD-40-like repeat-containing amidohydrolase [Gramella forsetii
           KT0803]
 gi|117576825|emb|CAL65294.1| WD40-like repeat containing amidohydrolase family protein [Gramella
           forsetii KT0803]
          Length = 1102

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 45/198 (22%), Positives = 83/198 (41%), Gaps = 25/198 (12%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +GK  +  +  D    IY + +       L   +   +   +SPD S+I F SD  G
Sbjct: 63  VSPDGKTIVFDLLGD----IYKMPISGGKASILRTGIPYEVQPRFSPDGSKISFTSDAGG 118

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFS----GEKFAIGVM 376
            + +++M  NG + K+I+++K     + VW+P G+ +     FT       GE +   + 
Sbjct: 119 GDNIWIMDVNGKNAKQITEEKFRLLNNAVWTPDGNSVIARKHFTSGRSLGAGEMWQYHIA 178

Query: 377 KKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRK--------KDGDTGSKLYSIDL---- 423
            K+G Q      +  ++  P+ +  G+ L +S           + D   ++Y I      
Sbjct: 179 AKEGLQLTERKNDQQDVNEPSITSDGKYLFYSEDMYPGGNFQYNKDPNKQIYVIKRYNFE 238

Query: 424 NGRNETLINTPAYASDPQ 441
            G   T+   P  A+ P+
Sbjct: 239 TGETITVTGGPGGAARPE 256



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 101/269 (37%), Gaps = 32/269 (11%)

Query: 201 ANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            N + +T +  +  +     SP+ + + +    D     +Y M     +A          
Sbjct: 44  WNFKTMTLNASEGTWMNLDVSPDGKTIVFDLLGD-----IYKMPISGGKASILRTGIP-Y 97

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV- 317
            + PRFS +G +   +       +I+ +D+     +++T   F +  +A ++PD + ++ 
Sbjct: 98  EVQPRFSPDGSKISFTSDAGGGDNIWIMDVNGKNAKQITEEKFRLLNNAVWTPDGNSVIA 157

Query: 318 ---FESDRE-GKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTK--FSGE 369
              F S R  G  +++       +  ++++ K       +P  +  G  + +++  + G 
Sbjct: 158 RKHFTSGRSLGAGEMWQYHIAAKEGLQLTERKNDQQDVNEPSITSDGKYLFYSEDMYPGG 217

Query: 370 KF--------AIGVMKK----DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            F         I V+K+     G    +         P  SP G+ L F ++    T S 
Sbjct: 218 NFQYNKDPNKQIYVIKRYNFETGETITVTGGPGGAARPEVSPDGKKLAFVKRI--RTKSV 275

Query: 418 LYSIDL-NGRNETLINTPAYASDPQWVGF 445
           L+  DL  G    + +  +      W  F
Sbjct: 276 LFIHDLETGEEWPVFDNLSKDQQEAWAIF 304



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 56/267 (20%), Positives = 105/267 (39%), Gaps = 46/267 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-------------FRSMILAPR 264
            + PN +++ +  + +  I +V + +  +   P ++ N               S    P+
Sbjct: 311 SWIPNSEELVF--WANGKINKVNIDNYEVSEIPFQVNNKIKIAETLQTDHEVFSEKFNPK 368

Query: 265 F------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                  S NGK  +     +    ++   L +   +R+TN+       S+SPD + I++
Sbjct: 369 VIRHAVTSPNGKTLVF----NAVGFLWKKSLPNGKPQRITNSEDFEFEPSFSPDGNHIIY 424

Query: 319 -ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------ 371
              D +    +  +  +GS  K I+ +K   Y +P +S  G +I F+K SG         
Sbjct: 425 VTWDDQNLGTIKRVSLSGSASKTITSEK-GIYRNPSYSNDGKMIVFSKESGNSDLGQTFT 483

Query: 372 ---AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR--KKDGDTGSKLYSIDLNGR 426
               I  M   G   + LV++     P ++     + F       G+    L S+DLNG+
Sbjct: 484 KEPGIYTMNASGDNVKKLVKEG--IFPIFNVDDSRIFFQTGGYFFGNITKSLKSVDLNGK 541

Query: 427 NETLINTPAYA------SDPQWVGFMD 447
           +E       YA       D +W+ F +
Sbjct: 542 DERTHINSKYANRILPSPDNKWILFSN 568



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 99/285 (34%), Gaps = 38/285 (13%)

Query: 160 DDIYQSIT--GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           D  ++++T    +G + +  +      +   +   +  M   G     +  +      +P
Sbjct: 43  DWNFKTMTLNASEGTWMNLDVSPDGKTIVFDLLGDIYKMPISGGKA-SILRTGIPYEVQP 101

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---- 273
           RFSP+  K+++ + D      +++MD     A +       ++    ++ +G   +    
Sbjct: 102 RFSPDGSKISFTS-DAGGGDNIWIMDVNGKNAKQITEEKFRLLNNAVWTPDGNSVIARKH 160

Query: 274 ISVQKD-EAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIV----------FE 319
            +  +   A +++   + +    +LT   N        S + D   +           F+
Sbjct: 161 FTSGRSLGAGEMWQYHIAAKEGLQLTERKNDQQDVNEPSITSDGKYLFYSEDMYPGGNFQ 220

Query: 320 SDREGKEQLYVM---QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            +++  +Q+YV+        +   ++         P  SP G  +AF K    K  + + 
Sbjct: 221 YNKDPNKQIYVIKRYNFETGETITVT-GGPGGAARPEVSPDGKKLAFVKRIRTKSVLFIH 279

Query: 377 KKDGSQERLLVED------------SNLQAPTWSPSGRSLIFSRK 409
             +  +E  + ++                  +W P+   L+F   
Sbjct: 280 DLETGEEWPVFDNLSKDQQEAWAIFGVYPNFSWIPNSEELVFWAN 324



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 90/229 (39%), Gaps = 34/229 (14%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + +T S D   FEP FSP+   + Y T+DD+++  +  +      A K I + + +   
Sbjct: 400 PQRITNSED-FEFEPSFSPDGNHIIYVTWDDQNLGTIKRVSL-SGSASKTITSEKGIYRN 457

Query: 263 PRFSSNGKRALISVQKDEA---------MDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           P +S++GK  + S +   +           IY+++   +  ++L       I   ++ D 
Sbjct: 458 PSYSNDGKMIVFSKESGNSDLGQTFTKEPGIYTMNASGDNVKKLVKEG---IFPIFNVDD 514

Query: 314 SQIVFESDREG------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+I F++   G       + L  +  NG D++     K A+   P  SP    I F+   
Sbjct: 515 SRIFFQT--GGYFFGNITKSLKSVDLNGKDERTHINSKYANRILP--SPDNKWILFSNLH 570

Query: 368 GEKFAIGVM---------KKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
               A   M                  + +D+ +    WS +   + ++
Sbjct: 571 KAYVAPFAMTGQAIDLTPDSKTLPVTPITKDAGVNL-HWSTNSEKIHWT 618


>gi|116622793|ref|YP_824949.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225955|gb|ABJ84664.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 885

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 95/252 (37%), Gaps = 10/252 (3%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           GA  R  + +    +    + P+  + A  ++                   +++    + 
Sbjct: 513 GAPRRVFSATNFNFVPRGAWMPD-SRHAVLSFSTGGAQPALWFADLEREKLRKLTASTAA 571

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              P  + +G+R + +   D+  D+  + L   A   L        S ++SPD  Q+++ 
Sbjct: 572 EEFPSLAPDGRRLVFTSVTDD-FDLIELPLDGTAPRTLLANSRNMYSPAWSPDGDQLLYA 630

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKE------ASYFDPVWSPQGDLIAFTKFSGEKFA- 372
           +DR G  +++      S  + +   ++       +   PV+SP G   AF +++ ++ A 
Sbjct: 631 TDRSGASEIWSRNVKASIDRPMVTARDFPPGTTTALTHPVFSPDGSRFAFVRYATDQPAT 690

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           I V    G    + +    + +PTWSP G S+     +D      +  +  N     + +
Sbjct: 691 IWVEPTVGGAP-IRMASEYMVSPTWSPDGNSIAGLMHRDRPWQPAIVEVGANMSPHVIAS 749

Query: 433 TPAYASDPQWVG 444
            P      +W  
Sbjct: 750 APTCLMPMEWSP 761



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 56/297 (18%), Positives = 109/297 (36%), Gaps = 30/297 (10%)

Query: 159 SDDIYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           +  + +S T     F   +S +++  +    G     L  +   G +   +       L 
Sbjct: 376 AIQLTRSTTRVSSAFWSPDSAVVYCIDRAGKG----ELWGISPSGGHAVKILED----LH 427

Query: 216 EPRFSPNQQKVAY--ATYDDEDILRVYLMDTRIDRAPKRIGNFR------SMILAPRFSS 267
               SP+ + +A   AT     +     + +    AP+            S   +  FS 
Sbjct: 428 TADISPDGKSLAIWRATESGGAVKSSLWISSPPGAAPRPYLPAPFEVPLESNGGSLHFSP 487

Query: 268 NGKRALISVQKDEAMDIYSVD--LQSNATERLTNTLFINISAS--YSPDSSQIVFE-SDR 322
           +GK  L+      A  ++ +     S A  R+ +    N      + PDS   V   S  
Sbjct: 488 DGKSILLVASGI-APQVWVLPFPASSGAPRRVFSATNFNFVPRGAWMPDSRHAVLSFSTG 546

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             +  L+         ++++    A  F P  +P G  + FT  + + F +  +  DG+ 
Sbjct: 547 GAQPALWFADLEREKLRKLTASTAAEEF-PSLAPDGRRLVFTSVTDD-FDLIELPLDGTA 604

Query: 383 ER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            R LL    N+ +P WSP G  L+++  + G   S+++S ++    +  + T     
Sbjct: 605 PRTLLANSRNMYSPAWSPDGDQLLYATDRSG--ASEIWSRNVKASIDRPMVTARDFP 659



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/239 (21%), Positives = 91/239 (38%), Gaps = 18/239 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +  DG   R L     + ++ P +SP+  ++ YAT D      ++  + +      
Sbjct: 594 DLIELPLDGTAPRTLLA-NSRNMYSPAWSPDGDQLLYAT-DRSGASEIWSRNVKASIDRP 651

Query: 252 RIGN---FRSMILA---PRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +           A   P FS +G R        D+   I+       A  R+ +     
Sbjct: 652 MVTARDFPPGTTTALTHPVFSPDGSRFAFVRYATDQPATIWVEPTVGGAPIRMASE--YM 709

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S ++SPD + I     R+   Q  +++   +    +            WSP G+ +A  
Sbjct: 710 VSPTWSPDGNSIAGLMHRDRPWQPAIVEVGANMSPHVIASAPTCLMPMEWSPTGEWLACE 769

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +G    I +  +DG++ R L    N  A  +S  G +L  + +  G T  K  +IDL
Sbjct: 770 ARTG----IELFSRDGARRRTLPRL-NSSAIAFSRDGGTLYAAGRDAGRTFLK--AIDL 821



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 75/208 (36%), Gaps = 26/208 (12%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            N       P +S +GK             +    L+S    +LT +     SA +SPD 
Sbjct: 336 ANDHEAESGPAWSPDGKSIAYLKTVAGIPQLMVRGLESPTAIQLTRSTTRVSSAFWSPD- 394

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---- 369
           S +V+  DR GK +L+ +  +G    +I +D          SP G  +A  + +      
Sbjct: 395 SAVVYCIDRAGKGELWGISPSGGHAVKILED----LHTADISPDGKSLAIWRATESGGAV 450

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFSRKKDGDTGSKLYSI 421
           K ++ +    G+  R     +  + P         +SP G+S++           +++ +
Sbjct: 451 KSSLWISSPPGAAPR-PYLPAPFEVPLESNGGSLHFSPDGKSILLVAS---GIAPQVWVL 506

Query: 422 D---LNGRNETLINTP--AYASDPQWVG 444
                +G    + +     +     W+ 
Sbjct: 507 PFPASSGAPRRVFSATNFNFVPRGAWMP 534



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 94/304 (30%), Gaps = 65/304 (21%)

Query: 199 DGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           D A  R++  + D +    P +SP+ + +AY        +   ++         ++    
Sbjct: 326 DLAAYRFIPFANDHEAESGPAWSPDGKSIAYLKTVAG--IPQLMVRGLESPTAIQLTRST 383

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFIN-------- 304
           + + +  +S +    +  + +    +++ +        ++     T  +  +        
Sbjct: 384 TRVSSAFWSPD-SAVVYCIDRAGKGELWGISPSGGHAVKILEDLHTADISPDGKSLAIWR 442

Query: 305 --------------------------------------ISASYSPDSSQIVFESDREGKE 326
                                                  S  +SPD   I+  +      
Sbjct: 443 ATESGGAVKSSLWISSPPGAAPRPYLPAPFEVPLESNGGSLHFSPDGKSILLVAS-GIAP 501

Query: 327 QLYVM--QSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQ 382
           Q++V+   ++    +R+      ++     W P       +    G + A+     +  +
Sbjct: 502 QVWVLPFPASSGAPRRVFSATNFNFVPRGAWMPDSRHAVLSFSTGGAQPALWFADLEREK 561

Query: 383 ERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDP 440
            R L    +  + P+ +P GR L+F+   D      L  + L+G    TL+        P
Sbjct: 562 LRKLTASTAAEEFPSLAPDGRRLVFTSVTD---DFDLIELPLDGTAPRTLLANSRNMYSP 618

Query: 441 QWVG 444
            W  
Sbjct: 619 AWSP 622



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 63/204 (30%), Gaps = 55/204 (26%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           SR  FV  +        ++ V    G     +     + +  P +SP+   +A      +
Sbjct: 676 SRFAFVRYATDQPA---TIWVEPTVGGAPIRM---ASEYMVSPTWSPDGNSIA-GLMHRD 728

Query: 235 DILRVYLMDTRIDRAPKRIGNFRS----MILAP--------------------------- 263
              +  +++   + +P  I +  +    M  +P                           
Sbjct: 729 RPWQPAIVEVGANMSPHVIASAPTCLMPMEWSPTGEWLACEARTGIELFSRDGARRRTLP 788

Query: 264 -------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF---INISASY---- 309
                   FS +G     + +      + ++DL + A   +        I+  A+Y    
Sbjct: 789 RLNSSAIAFSRDGGTLYAAGRDAGRTFLKAIDLATGAIRDIAQHSGTMVISGGATYQARL 848

Query: 310 --SPDSSQIVFESDREGKEQLYVM 331
             S D   +V  S  E +  L+++
Sbjct: 849 SLSHDGRSLV-TSAVESQSDLWIL 871


>gi|255035493|ref|YP_003086114.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Dyadobacter fermentans DSM 18053]
 gi|254948249|gb|ACT92949.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Dyadobacter fermentans DSM 18053]
          Length = 652

 Score =  122 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 58/283 (20%), Positives = 95/283 (33%), Gaps = 62/283 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V   D      +            +SP+ +++ Y T      L +Y + T   R   R
Sbjct: 54  IMVTPADQTAPVTIARGIAH-----GWSPDGRELLYET--ANGELHIYTVSTAASRLLTR 106

Query: 253 IGNFRSMILAPR-----FSSNGKRALISV--------------------QKDEA------ 281
                  I         +S +G+                           K         
Sbjct: 107 RSESAYFINHLALNNCIWSPDGQSIAFVGADVPEAPEPAVRVIDDLLYKSKGGRGRPIYA 166

Query: 282 ----MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------QLYVM 331
                 IY +     A E LT+  F   S ++SPD   I F S+R  +       +++ +
Sbjct: 167 DRAQTHIYRIPAAGGAPEPLTSGPFNEHSTTWSPDGRYIAFVSNRTDRPDDIQQSEIWKV 226

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---------EKFAIGVMKKDGSQ 382
             +      +S D     + P WSP+G  IAF    G         E   I ++  DG Q
Sbjct: 227 DIHSKAITPLS-DHRGLAYQPAWSPKGGHIAFLATPGQTGTNDSPAEDTHIALIPADGGQ 285

Query: 383 ERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            R L +  D  ++   W PSG+ + F+    GDT   +Y + +
Sbjct: 286 MRYLTKSLDRRIEHLRWHPSGKYIYFTAGDRGDT--SVYRVSI 326



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 65/204 (31%), Gaps = 43/204 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTR----------------------------IDRAP 250
           +SP+ Q +A+   D  +     +                                   AP
Sbjct: 124 WSPDGQSIAFVGADVPEAPEPAVRVIDDLLYKSKGGRGRPIYADRAQTHIYRIPAAGGAP 183

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFIN 304
           + + +      +  +S +G+       + +  D      I+ VD+ S A   L++   + 
Sbjct: 184 EPLTSGPFNEHSTTWSPDGRYIAFVSNRTDRPDDIQQSEIWKVDIHSKAITPLSDHRGLA 243

Query: 305 ISASYSPDSSQIVFESDRE--GKE-------QLYVMQSNGSDQKRISQDKEASYFDPVWS 355
              ++SP    I F +     G          + ++ ++G   + +++  +       W 
Sbjct: 244 YQPAWSPKGGHIAFLATPGQTGTNDSPAEDTHIALIPADGGQMRYLTKSLDRRIEHLRWH 303

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD 379
           P G  I FT       ++  +  +
Sbjct: 304 PSGKYIYFTAGDRGDTSVYRVSIE 327



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 77/233 (33%), Gaps = 54/233 (23%)

Query: 260 ILAPRFSSNGKRALI-----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              P  S + +             DE  D+  V         +T    I     +SPD  
Sbjct: 24  AGTPLLSPDDRFLAYHVAVADYDADERYDLIMVTPADQTA-PVTIARGIAHG--WSPDGR 80

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-------DPVWSPQGDLIAFT--- 364
           ++++E       +L++   + +  + +++  E++YF       + +WSP G  IAF    
Sbjct: 81  ELLYE---TANGELHIYTVSTAASRLLTRRSESAYFINHLALNNCIWSPDGQSIAFVGAD 137

Query: 365 -----------------KFSGEKF----------AIGVMKKDGSQERLLVEDSNLQAP-T 396
                            K  G +            I  +   G     L      +   T
Sbjct: 138 VPEAPEPAVRVIDDLLYKSKGGRGRPIYADRAQTHIYRIPAAGGAPEPLTSGPFNEHSTT 197

Query: 397 WSPSGRSLIFSRKKDGDTG----SKLYSIDLNGRNETLINTP-AYASDPQWVG 444
           WSP GR + F   +         S+++ +D++ +  T ++     A  P W  
Sbjct: 198 WSPDGRYIAFVSNRTDRPDDIQQSEIWKVDIHSKAITPLSDHRGLAYQPAWSP 250



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 61/196 (31%), Gaps = 16/196 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   +  +  +   G     LT S         +SP+ + +A+ +   +    +   +  
Sbjct: 166 ADRAQTHIYRIPAAGGAPEPLT-SGPFNEHSTTWSPDGRYIAFVSNRTDRPDDIQQSEIW 224

Query: 246 ----IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA---------MDIYSVDLQSN 292
                 +A   + + R +   P +S  G          +            I  +     
Sbjct: 225 KVDIHSKAITPLSDHRGLAYQPAWSPKGGHIAFLATPGQTGTNDSPAEDTHIALIPADGG 284

Query: 293 ATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               LT +L   I    + P    I F +   G   +Y +    +  + + Q  +    +
Sbjct: 285 QMRYLTKSLDRRIEHLRWHPSGKYIYFTAGDRGDTSVYRVSIENNHIETV-QGGKGCISE 343

Query: 352 PVWSPQGDLIAFTKFS 367
              + QG+ + F K +
Sbjct: 344 FCLTAQGEDMVFIKSN 359



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 76/227 (33%), Gaps = 26/227 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNS--LCVMDRDGANIRYLTPSRDQILFEPRFS 220
           YQ     KG   + +    ++  +        + ++  DG  +RYLT S D+ +   R+ 
Sbjct: 244 YQPAWSPKGGHIAFLATPGQTGTNDSPAEDTHIALIPADGGQMRYLTKSLDRRIEHLRWH 303

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + + +   D  D   VY +    +   + +   +  I     ++ G+  +       
Sbjct: 304 PSGKYIYFTAGDRGDT-SVYRVSIE-NNHIETVQGGKGCISEFCLTAQGEDMVFIKSNTH 361

Query: 281 A-MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----FESDREGKEQLYVMQSNG 335
              +++    +    E +T        A  S  + Q      FES    + Q ++M+   
Sbjct: 362 FPPELFRTKNKGAVVEPVTQENA----AWLSTKALQPADPFWFESFDGMQVQGWLMKPVA 417

Query: 336 SDQKR------ISQDKEASYFDPVW-------SPQGDLIAFTKFSGE 369
            D  R      +      + F   +       S  G  + +    G 
Sbjct: 418 FDPSRKHPLILVIHGGPHNMFGHDFDERFHLLSQAGYAVVYINPRGS 464


>gi|159896545|ref|YP_001542792.1| WD40 domain-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159889584|gb|ABX02664.1| WD40 domain protein beta Propeller [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 620

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 99/323 (30%), Gaps = 46/323 (14%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP----- 217
           Y  +          +     S   G  +     M+ DG++ + L  S D     P     
Sbjct: 301 YGHLGTPWNSSEPSLPIAFGSKRDGGAEWDTYAMNGDGSS-QLLYASNDSKETVPYSWVR 359

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-----------------NFRSMI 260
            + P++ K+ +      +     +     D    R+                     S  
Sbjct: 360 SWDPSKVKL-FVDSRRGNGSNRQIWTVGADGTMTRVTYTDGTPTPPGVPYQGYVGTPSND 418

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                S +G +      +     I+       +  ++T     + + S+S D   + + S
Sbjct: 419 FNASVSPDGSKMAFVSDRSGKPQIFVSYTNGASQTQVTLDDCDHQTPSWSADGRYLYWAS 478

Query: 321 DREGKEQLYVMQSNGS------------------DQKRISQDKEASYFDPVWSPQGDLIA 362
           +     +  + ++  +                  ++  ++    +    P  SP G  I 
Sbjct: 479 NCGTNAKYNIYRAELNWLADQPSNDYPYLSLELRNKVNLTNSTTSDNGFPRVSPDGTKIV 538

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           FT        + +M  DG+ +  L   S    AP+W   G  + F   +DG+    +Y +
Sbjct: 539 FTSNRDGNSEVYLMNADGTNQTRLTNSSAEDGAPSWKLDGTKIAFDSNRDGNW--NVYVM 596

Query: 422 DLNGRNE-TLINTPAYASDPQWV 443
           + +G  +  L N  A      W 
Sbjct: 597 NTDGTGQAQLTNNSADDRWNVWG 619



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 106/260 (40%), Gaps = 35/260 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-----WRKIAHTISDDIYQSITGEKG 171
            + G    R   ++W V     +    +     +     ++    T S+D   S++ +  
Sbjct: 372 SRRGNGSNR---QIWTVGADGTMTRVTYTDGTPTPPGVPYQGYVGTPSNDFNASVSPDG- 427

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT- 230
              S++ FVS+       K  + V   +GA+   +T   D     P +S + + + +A+ 
Sbjct: 428 ---SKMAFVSDR----SGKPQIFVSYTNGASQTQVTLD-DCDHQTPSWSADGRYLYWASN 479

Query: 231 ------YDDEDILRVYLMDTRIDRAPKRIGNFR----------SMILAPRFSSNGKRALI 274
                 Y+       +L D   +  P      R          S    PR S +G + + 
Sbjct: 480 CGTNAKYNIYRAELNWLADQPSNDYPYLSLELRNKVNLTNSTTSDNGFPRVSPDGTKIVF 539

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +  +D   ++Y ++       RLTN+   + + S+  D ++I F+S+R+G   +YVM ++
Sbjct: 540 TSNRDGNSEVYLMNADGTNQTRLTNSSAEDGAPSWKLDGTKIAFDSNRDGNWNVYVMNTD 599

Query: 335 GSDQKRISQDKEASYFDPVW 354
           G+ Q +++ +  A     VW
Sbjct: 600 GTGQAQLT-NNSADDRWNVW 618


>gi|224023468|ref|ZP_03641834.1| hypothetical protein BACCOPRO_00170 [Bacteroides coprophilus DSM
           18228]
 gi|224016690|gb|EEF74702.1| hypothetical protein BACCOPRO_00170 [Bacteroides coprophilus DSM
           18228]
          Length = 1106

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 82/242 (33%), Gaps = 38/242 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R SP+  ++ +      DI +V            ++    S    P +S +GK+   S  
Sbjct: 54  RISPDGTEILFCY--KGDIYKV----AASGGEAVQLTTQESYEATPVWSPDGKQIAFSSD 107

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKE 326
           +   MD++ +  +  A  RLT        ++++PD   +VF +                 
Sbjct: 108 RYGNMDVFVMPAEGGAARRLTVNSAAETPSAFTPDGKYVVFSASIQDPAASAMFPTSAMT 167

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-------------- 372
           +LY +  +G   +++     A       S      AF     + F               
Sbjct: 168 ELYKVPVSGGKTEQVL-GTPAELVSFNASGD----AFLYQDRKGFEDEWRKHHTSSITRD 222

Query: 373 IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           I +      +   L       + P W+P G+++ F  ++D      +Y+  L+   +   
Sbjct: 223 IWMYDAKTGKHTNLTARAGEDRNPVWAPDGKAVYFLSERD-KGSFNVYTFPLDNPKQVRA 281

Query: 432 NT 433
            T
Sbjct: 282 LT 283



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 76/215 (35%), Gaps = 34/215 (15%)

Query: 258 SMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            M + P +      S +G   L   + D    IY V        +LT       +  +SP
Sbjct: 42  GMAVTPLWMRDVRISPDGTEILFCYKGD----IYKVAASGGEAVQLTTQESYEATPVWSP 97

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
           D  QI F SDR G   ++VM + G   +R++ +  A+     ++P G  + F+       
Sbjct: 98  DGKQIAFSSDRYGNMDVFVMPAEGGAARRLTVNS-AAETPSAFTPDGKYVVFSASIQDPA 156

Query: 367 ------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--------- 411
                 +     +  +   G +   ++     +  +++ SG + ++  +K          
Sbjct: 157 ASAMFPTSAMTELYKVPVSGGKTEQVLGTP-AELVSFNASGDAFLYQDRKGFEDEWRKHH 215

Query: 412 -GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                  ++  D   G++  L        +P W  
Sbjct: 216 TSSITRDIWMYDAKTGKHTNLTARAGEDRNPVWAP 250



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/332 (16%), Positives = 118/332 (35%), Gaps = 83/332 (25%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +  I   + + D        LT  R      P ++P+ + V + +  D+    VY     
Sbjct: 216 TSSITRDIWMYDAKTGKHTNLTA-RAGEDRNPVWAPDGKAVYFLSERDKGSFNVYTFPLD 274

Query: 246 IDRAPKRIGNFRSM--------------------------ILAP---------------- 263
             +  + + +FR+                             +P                
Sbjct: 275 NPKQVRALTSFRTHPVRFLSMSGNGMLCYTYDGEIYTQNPDGSPKKVAVSLTRDDEQLPA 334

Query: 264 RFS-----------SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           RFS            +GK+   +V+     +++   ++   T+++T+T       S+  D
Sbjct: 335 RFSFTRGAREAVPSPDGKQVAFTVRG----EVFVTSVEYGTTKQITHTPETEEGLSFGAD 390

Query: 313 SSQIVFESDREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +  +V+ S+R G   LY+             +   +++ +   K      P +SP G  +
Sbjct: 391 NRTLVYASERGGNWGLYLAKIGRKEDANFPNATLIEEEALLPSKTVERTYPQFSPDGKEV 450

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFSRKKDGD 413
           AF +       + V+  +  + R + + S   +       +WSP G+   L F   +  D
Sbjct: 451 AFIEDRN---RLMVVNLETKKVRQITDGSTWYSTGGGFNYSWSPDGKWFTLEFIGNRH-D 506

Query: 414 TGSKLYSIDLNGRNE--TLINTPAYASDPQWV 443
             S +  +  +G+ E   L N+  +++ P+WV
Sbjct: 507 PYSDVALVSADGKGELVNLTNSGYFSASPRWV 538



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 102/270 (37%), Gaps = 42/270 (15%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT  ++     P +SP+ +++A+++    + + V++M      
Sbjct: 66  YKGDIYKVAASGGEAVQLTT-QESYEATPVWSPDGKQIAFSSDRYGN-MDVFVMPAE-GG 122

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATERL 297
           A +R+    +      F+ +GK  + S    +             ++Y V +    TE++
Sbjct: 123 AARRLTVNSAAETPSAFTPDGKYVVFSASIQDPAASAMFPTSAMTELYKVPVSGGKTEQV 182

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +S  ++      +++ DR+G                +++  +       ++  
Sbjct: 183 LGTPAELVS--FNASGDAFLYQ-DRKGFEDEWRKHHTSSITRDIWMYDAKTGKHTNLT-A 238

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDG-SQERLLVE--DSNLQAPTWSPS 400
           +     +PVW+P G  + F ++     F +     D   Q R L       ++  + S +
Sbjct: 239 RAGEDRNPVWAPDGKAVYFLSERDKGSFNVYTFPLDNPKQVRALTSFRTHPVRFLSMSGN 298

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           G  L ++         ++Y+ + +G  + +
Sbjct: 299 G-MLCYTYD------GEIYTQNPDGSPKKV 321



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 56/259 (21%), Positives = 98/259 (37%), Gaps = 36/259 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-- 263
           L PS+      P+FSP+ ++VA+   +D + L V  ++T+  R       + S       
Sbjct: 430 LLPSKTVERTYPQFSPDGKEVAF--IEDRNRLMVVNLETKKVRQITDGSTWYSTGGGFNY 487

Query: 264 RFSSNGKRA---LISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFE 319
            +S +GK      I  + D   D+  V          LTN+ + + S  +  D + I+F 
Sbjct: 488 SWSPDGKWFTLEFIGNRHDPYSDVALVSADGKGELVNLTNSGYFSASPRWVMDGNAILFA 547

Query: 320 SDREGKE-----------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +DR G              L  M  +  D+ R+S++      +     + +         
Sbjct: 548 TDRYGMRSHASWGSQEDVMLVFMNQDAYDKFRLSKEDYELQKELEKEQKKESEKDADSKD 607

Query: 369 EKFAIG------------VMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +K                V++ DG      RL    S+L +   S  G  L +    +G 
Sbjct: 608 KKKKEDGDKKESDKVKEVVVELDGIQDRIVRLTPNSSDLGSAILSKDGEKLYYLAAFEG- 666

Query: 414 TGSKLYSIDLNGRNETLIN 432
            G  L+ IDL  R+  L++
Sbjct: 667 -GYDLWKIDLRKRDVKLLH 684


>gi|262384205|ref|ZP_06077341.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295103|gb|EEY83035.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 1077

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 62/342 (18%), Positives = 138/342 (40%), Gaps = 26/342 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA-SWRKIAHTISDDIYQSITGEKGDFNS 175
            +   +R+  EFR W             ++    S   I +  + DI+    G++  F S
Sbjct: 176 KQLAYNRVMREFRTWKYYKGGMADDIWVYNPEKKSVENITNNEAQDIFPMWIGDEIYFLS 235

Query: 176 -RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   ++  V +   K +  V +    ++++ +   + I+FE     N   +       +
Sbjct: 236 DRDYTMNLFVYNTKTKQTSKVTNFTEYDVKFPSSFGNTIVFE-----NGGYIYKMDAASK 290

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +V +     +   +  I +    I +   S  G+R +++ +     +++++ +    
Sbjct: 291 KPEKVNVTLASDNVYARSEIKDGSKYITSASLSPKGERMVVTARG----EVFNIPVDKGV 346

Query: 294 TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ +T T       A +SPD   I + SD  G+ +LY+  S G +  +++++ +      
Sbjct: 347 TKNITRTPGAHERDAQWSPDGKHIAYISDATGETELYLQDSEGGEPIQLTKNNDTYIRTF 406

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            WSP    I +T        I ++     Q   + +      +  ++SP    L +SR  
Sbjct: 407 QWSPDSKKIVYTDRKN---RINLLDVSNKQLTTISQSLLGEARNVSFSPDNNWLTYSRVS 463

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           D +  S +Y  D+ G+ E  +        +P +++D +++ F
Sbjct: 464 DNNF-SIVYVYDIAGKKEYPVTDKWYESYSPVFSTDGKYLVF 504



 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 111/339 (32%), Gaps = 33/339 (9%)

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
            +    + ITN ++   F  W        +   +         +   +++ K ++     
Sbjct: 206 PEKKSVENITNNEAQDIFPMW--------IGDEIYFLSDRDYTMNLFVYNTKTKQTSKVT 257

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            F               D  + S  G    F +          S   +     +  D   
Sbjct: 258 NFTE------------YDVKFPSSFGNTIVFENGGYIYKMDAASKKPEKVNVTLASDNVY 305

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R       + +     SP  +++      +     V+ +               +    
Sbjct: 306 ARSEIKDGSKYITSASLSPKGERMVVTARGE-----VFNIPVDKGVTKNITRTPGAHERD 360

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFES 320
            ++S +GK            ++Y  D +     +LT  N  +I     +SPDS +IV+  
Sbjct: 361 AQWSPDGKHIAYISDATGETELYLQDSEGGEPIQLTKNNDTYIRTF-QWSPDSKKIVYT- 418

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKD 379
           DR  K ++ ++  +      ISQ       +  +SP  + + +++ S   F+I  V    
Sbjct: 419 DR--KNRINLLDVSNKQLTTISQSLLGEARNVSFSPDNNWLTYSRVSDNNFSIVYVYDIA 476

Query: 380 GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSK 417
           G +E  + +      +P +S  G+ L+F+  +D +    
Sbjct: 477 GKKEYPVTDKWYESYSPVFSTDGKYLVFTSARDFNPTYS 515



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 77/202 (38%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y V       +RLT+ +   +   +SPD   I F    +G  +
Sbjct: 34  NGSEIVFSYAGD----LYKVPATGGEAQRLTSYVGYEMFPRFSPDGKTIAFTGQYDGNTE 89

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKF--AIG 374
           +Y M S+G +  RI+       D       P      W+P G+ I +     + F   + 
Sbjct: 90  VYTMPSSGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGNGIVYRNRISDGFSGKLY 149

Query: 375 VMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSIDL 423
            + K+G   +   L E       ++SP G+ L ++R            G     ++  + 
Sbjct: 150 TVNKEGGLSEVIPLPEGGFC---SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNP 206

Query: 424 NGRN-ETLINTPAYASDPQWVG 444
             ++ E + N  A    P W+G
Sbjct: 207 EKKSVENITNNEAQDIFPMWIG 228



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 55/280 (19%), Positives = 100/280 (35%), Gaps = 48/280 (17%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   + LT S       PRFSP+ + +A+    D +   VY M +     P 
Sbjct: 45  DLYKVPATGGEAQRLT-SYVGYEMFPRFSPDGKTIAFTGQYDGNT-EVYTMPS-SGGEPL 101

Query: 252 RIG-------NFRSMILAP-----RFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERL 297
           RI        +     + P      ++ +G   +    +    +  +Y+V+ +   +E +
Sbjct: 102 RITYTATNSRDDLGDRMGPNNIVMTWTPDGNGIVYRNRISDGFSGKLYTVNKEGGLSEVI 161

Query: 298 TNTLFINISASYSPDSSQIVFES----DREGK-------EQLYVMQSNGSDQKRISQDKE 346
                     SYSPD  Q+ +       R  K       + ++V        + I+ + E
Sbjct: 162 PLPEG--GFCSYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNPEKKSVENIT-NNE 218

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
           A    P+W   GD I F         + V      Q   +    + +++ P  S  G ++
Sbjct: 219 AQDIFPMW--IGDEIYFLSDRDYTMNLFVYNTKTKQTSKVTNFTEYDVKFP--SSFGNTI 274

Query: 405 IFSRKKDGDTGSKLYSIDLNGR-----NETLINTPAYASD 439
           +F      + G  +Y +D   +     N TL +   YA  
Sbjct: 275 VF------ENGGYIYKMDAASKKPEKVNVTLASDNVYARS 308


>gi|219753666|emb|CAB60199.2| P100GA2 protein [Haemonchus contortus]
          Length = 825

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 86/221 (38%), Gaps = 31/221 (14%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
              T+D      +++++ +     K++ +          S +GK    +  +   +++++
Sbjct: 548 TVYTWDIYPEFDIFMVN-KYGNIVKQLTDEPGYNAEAVLSPDGKTIAFTSIRTGDLELWT 606

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-------------------- 326
           ++       ++T     +    +SPD  ++VF + R   +                    
Sbjct: 607 MNTDGTNLHQVTKEYGYDGGCFFSPDGKRLVFRASRPKTQKEKEKYQKLLDYGLVEPTLT 666

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDG 380
           ++YV+  +G + K+++    AS+  P + P    I F+            FA+ V+ +DG
Sbjct: 667 EIYVVDVDGKNLKQVTNFGVASW-APYYLPDNKRIIFSSNYNMSAKQFGSFALYVINEDG 725

Query: 381 SQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKL 418
           +    +      Q    P ++ +G  L++   ++   G+ L
Sbjct: 726 TGLERVTFGEGYQFNAFPMFNRAGNKLVWGSSRNRTKGASL 766



 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 26/185 (14%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           + +       DI+ V+   N  ++LT+    N  A  SPD   I F S R G  +L+ M 
Sbjct: 549 VYTWDIYPEFDIFMVNKYGNIVKQLTDEPGYNAEAVLSPDGKTIAFTSIRTGDLELWTMN 608

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------------------A 372
           ++G++  +++++         +SP G  + F     +                       
Sbjct: 609 TDGTNLHQVTKE-YGYDGGCFFSPDGKRLVFRASRPKTQKEKEKYQKLLDYGLVEPTLTE 667

Query: 373 IGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKD---GDTGS-KLYSIDLNGRN 427
           I V+  DG   + +        AP + P  + +IFS   +      GS  LY I+ +G  
Sbjct: 668 IYVVDVDGKNLKQVTNFGVASWAPYYLPDNKRIIFSSNYNMSAKQFGSFALYVINEDGTG 727

Query: 428 ETLIN 432
              + 
Sbjct: 728 LERVT 732



 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 90/228 (39%), Gaps = 36/228 (15%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           Q    +  +   DI +V      +D    +I            S +GK+ + + ++   +
Sbjct: 144 QSGHVWDVFPTYDIFKVNEYGNVLD----QITKNDVYDSEAFISPDGKKIVYTSKQSGDL 199

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-------------------- 322
           D++  D+      +LT     +  AS+SPD  +IVF + R                    
Sbjct: 200 DLWITDINGALKIQLTKKKGYDGGASFSPDGKKIVFHASRPKTNEEIAIYDRLLKNDLVA 259

Query: 323 EGKEQLYVMQSN-----GSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKF----SGEKFA 372
             K +LYVM++N     G+D+K +  Q +    + P +      I F+         ++ 
Sbjct: 260 TSKMELYVMEANTVCGKGTDEKPLFKQPRGGLDWTPYYHTDNKRIIFSSNMNSTKPNEYH 319

Query: 373 IGVMKKDGSQ-ERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKL 418
           + ++ +DG+  ER+   +    A P +S  G+ +++S  +       L
Sbjct: 320 LYIVNEDGTGLERVTFGNGYFNAFPVFSHDGKKVVWSSNRGSTKKGDL 367



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 81/209 (38%), Gaps = 30/209 (14%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  + ++++ G NI            E   SP+ + +A+ +    D L ++ M+T   
Sbjct: 555 YPEFDIFMVNKYG-NIVKQLTDEPGYNAEAVLSPDGKTIAFTSIRTGD-LELWTMNTD-G 611

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--------------------MDIYSV 287
               ++           FS +GKR +    + +                      +IY V
Sbjct: 612 TNLHQVTKEYGYDGGCFFSPDGKRLVFRASRPKTQKEKEKYQKLLDYGLVEPTLTEIYVV 671

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRI 341
           D+     +++TN    + +  Y PD+ +I+F S+        G   LYV+  +G+  +R+
Sbjct: 672 DVDGKNLKQVTNFGVASWAPYYLPDNKRIIFSSNYNMSAKQFGSFALYVINEDGTGLERV 731

Query: 342 SQDKEASYFD-PVWSPQGDLIAFTKFSGE 369
           +  +   +   P+++  G+ + +      
Sbjct: 732 TFGEGYQFNAFPMFNRAGNKLVWGSSRNR 760



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 77/211 (36%), Gaps = 36/211 (17%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             +  ++  G N+       D    E   SP+ +K+ Y +    D   + L  T I+ A 
Sbjct: 155 YDIFKVNEYG-NVLDQITKNDVYDSEAFISPDGKKIVYTSKQSGD---LDLWITDINGAL 210

Query: 251 K-RIGNFRSMILAPRFSSNGKRALISVQKDEA--------------------MDIYSVDL 289
           K ++   +       FS +GK+ +    + +                     M++Y ++ 
Sbjct: 211 KIQLTKKKGYDGGASFSPDGKKIVFHASRPKTNEEIAIYDRLLKNDLVATSKMELYVMEA 270

Query: 290 -----QSNATERLTNTL--FINISASYSPDSSQIVFESDREGK----EQLYVMQSNGSDQ 338
                +    + L       ++ +  Y  D+ +I+F S+          LY++  +G+  
Sbjct: 271 NTVCGKGTDEKPLFKQPRGGLDWTPYYHTDNKRIIFSSNMNSTKPNEYHLYIVNEDGTGL 330

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +R++         PV+S  G  + ++   G 
Sbjct: 331 ERVTFGNGYFNAFPVFSHDGKKVVWSSNRGS 361



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 59/148 (39%), Gaps = 23/148 (15%)

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           V+  D   +  ++++   G+  K+++ +   +  + V SP G  IAFT        +  M
Sbjct: 549 VYTWDIYPEFDIFMVNKYGNIVKQLTDEPGYNA-EAVLSPDGKTIAFTSIRTGDLELWTM 607

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG------------------DTGSK 417
             DG+    + ++        +SP G+ L+F   +                     T ++
Sbjct: 608 NTDGTNLHQVTKEYGYDGGCFFSPDGKRLVFRASRPKTQKEKEKYQKLLDYGLVEPTLTE 667

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVGF 445
           +Y +D++G+N   +     AS   W  +
Sbjct: 668 IYVVDVDGKNLKQVTNFGVAS---WAPY 692



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 96/306 (31%), Gaps = 47/306 (15%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           +D+Y S      D   +I++ S+          L + D +GA ++     +        F
Sbjct: 173 NDVYDSEAFISPDGK-KIVYTSKQSGD----LDLWITDINGA-LKIQLTKKKGYDGGASF 226

Query: 220 SPNQQKVAYATYDDEDILRVYLMDT-------------------------RIDRAPKRIG 254
           SP+ +K+ +     +    + + D                            D  P    
Sbjct: 227 SPDGKKIVFHASRPKTNEEIAIYDRLLKNDLVATSKMELYVMEANTVCGKGTDEKPLFKQ 286

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEA----MDIYSVDLQSNATERLTNTLFI-NISASY 309
               +   P + ++ KR + S   +        +Y V+      ER+T      N    +
Sbjct: 287 PRGGLDWTPYYHTDNKRIIFSSNMNSTKPNEYHLYIVNEDGTGLERVTFGNGYFNAFPVF 346

Query: 310 SPDSSQIVFESDRE----GKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           S D  ++V+ S+R     G   L++      G D    S +KE    + +        A 
Sbjct: 347 SHDGKKVVWSSNRGSTKKGDLNLFIADWVDPGRDTDDESDEKEELRTNRIPKKATQKNAM 406

Query: 364 TKFSGEKFAI-GVMKKDG----SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                E      V+   G       + L          +S     +I      G T  ++
Sbjct: 407 RWQDTETAPYDNVVHYTGERRLKNVKQLTFRGQNAEGYFSYDDSKIILQATGYGTTCDQI 466

Query: 419 YSIDLN 424
           Y +DLN
Sbjct: 467 YELDLN 472



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 38/83 (45%), Gaps = 10/83 (12%)

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           + I  + + G+    + ++    +  + SP G+ ++++ K+ GD    L+  D+NG  + 
Sbjct: 155 YDIFKVNEYGNVLDQITKNDVYDSEAFISPDGKKIVYTSKQSGD--LDLWITDINGALKI 212

Query: 430 LIN-------TPAYASDPQWVGF 445
            +          +++ D + + F
Sbjct: 213 QLTKKKGYDGGASFSPDGKKIVF 235


>gi|85713331|ref|ZP_01044349.1| Acylaminoacyl-peptidase [Idiomarina baltica OS145]
 gi|85692851|gb|EAQ30831.1| Acylaminoacyl-peptidase [Idiomarina baltica OS145]
          Length = 664

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 58/314 (18%), Positives = 104/314 (33%), Gaps = 64/314 (20%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRV 239
           S  +        L  +  +G +IR LT       + P +SP+ +++A+ +       + +
Sbjct: 44  SMDIKHDQKTGRLWTVKPNG-DIRPLTGDSAH-EWSPVWSPDGKRLAFISDASGSPQIAI 101

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS------------------------ 275
           Y  DT        +    S +    +S NG     S                        
Sbjct: 102 YWTDTGKHAVVGELTQTPSSL---SWSPNGDYIAFSQFTPIKSAAPVSLPGKPEGADWTA 158

Query: 276 ----------------VQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVF 318
                              D    IY +  +     ++T+  + +     +S D  QI F
Sbjct: 159 PPQFVDKDNYRYDGGGYVSDGYQQIYVISAEGGTARQITDDEYNSGGDLEWSADGKQIYF 218

Query: 319 ESDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            ++R           ++Y +Q +    + ++ D+      P  SP GD +AF        
Sbjct: 219 SANRRSDAFRQPMNSEIYAVQVDTGQVRTLT-DRNGPDGAPKRSPNGDWLAFIGNDDNGM 277

Query: 372 -----AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + VM  DG+Q R+L    D ++    W   G  + F+    G    +L   DL+
Sbjct: 278 SSQISRLYVMSVDGTQSRVLTSELDRSVTGFAWDTDGEGIYFTYDDKG--VGQLARTDLD 335

Query: 425 GRNETLINTPAYAS 438
           G  E L +     S
Sbjct: 336 GDYEPLTDRVGGLS 349



 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 53/299 (17%), Positives = 94/299 (31%), Gaps = 68/299 (22%)

Query: 212 QILFEPRFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           +    P   P+     +         D     L   + +   + +    +   +P +S +
Sbjct: 24  EYAASPALHPSGDYGVFVRQSMDIKHDQKTGRLWTVKPNGDIRPLTGDSAHEWSPVWSPD 83

Query: 269 GKRALISVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYSPDSSQIVFE------ 319
           GKR         +  I      +        LT T     S S+SP+   I F       
Sbjct: 84  GKRLAFISDASGSPQIAIYWTDTGKHAVVGELTQTPS---SLSWSPNGDYIAFSQFTPIK 140

Query: 320 ----------------------------------SDREGKEQLYVMQSNGSDQKRISQDK 345
                                                +G +Q+YV+ + G   ++I+ D+
Sbjct: 141 SAAPVSLPGKPEGADWTAPPQFVDKDNYRYDGGGYVSDGYQQIYVISAEGGTARQITDDE 200

Query: 346 EASYFDPVWSPQGDLIAFTK-------FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTW 397
             S  D  WS  G  I F+               I  ++ D  Q R L + +    AP  
Sbjct: 201 YNSGGDLEWSADGKQIYFSANRRSDAFRQPMNSEIYAVQVDTGQVRTLTDRNGPDGAPKR 260

Query: 398 SPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTP--------AYASDPQWVGF 445
           SP+G  L F    D    S+   LY + ++G    ++ +         A+ +D + + F
Sbjct: 261 SPNGDWLAFIGNDDNGMSSQISRLYVMSVDGTQSRVLTSELDRSVTGFAWDTDGEGIYF 319


>gi|116624085|ref|YP_826241.1| peptidase S9B dipeptidylpeptidase IV subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116227247|gb|ABJ85956.1| peptidase S9B, dipeptidylpeptidase IV domain protein [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 577

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 89/244 (36%), Gaps = 15/244 (6%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILA 262
           +    + D     P  SP+ +++AY+  +   +   ++    +    P ++       +A
Sbjct: 41  KVQISTGDASESYPSISPDGKRLAYSARESSKVSAFHVFVRELPSGKPLQLTKGEGNDIA 100

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISA----SYSPDSSQI 316
           P +S +G        +D   +   +        ++        +       S+ PDS  +
Sbjct: 101 PVWSPDGGTLAFVRVEDGKRECIVMPADGGDERKIAELGAAADSTQPAPEVSWKPDSKSL 160

Query: 317 VFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFT-KFSGEKFA 372
           V   + E +   L  +  +G   +RI+   E +  D  P  +  G  IAF      +   
Sbjct: 161 VVVQNGEKQLPGLATLTLDG-KLQRITNPGEGTEGDSTPAVAASGSSIAFVRHTQNDGAD 219

Query: 373 IGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           I +    G   R L  +D  ++   WS  G+ LI+S  + G  G +++ +   G +    
Sbjct: 220 IFLCDATGGGVRRLTFDDRGIRGIAWSHDGQDLIYSANRAG--GWRIWRVPAYGGSPREY 277

Query: 432 NTPA 435
               
Sbjct: 278 TLGG 281



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 101/307 (32%), Gaps = 64/307 (20%)

Query: 193 LCVMDRDGANIRYLTPS-RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L  +  DG   R   P    +    P  + +   +A+  +   D   ++L D       +
Sbjct: 173 LATLTLDGKLQRITNPGEGTEGDSTPAVAASGSSIAFVRHTQNDGADIFLCD-ATGGGVR 231

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT------------- 298
           R+      I    +S +G+  + S  +     I+ V     +    T             
Sbjct: 232 RLTFDDRGIRGIAWSHDGQDLIYSANRAGGWRIWRVPAYGGSPREYTLGGKQAYYPTVGR 291

Query: 299 --------------------------------NTLFINISASYSPDSSQIVFESDREGKE 326
                                            +        +SPD +++   SD+ G E
Sbjct: 292 NRLAYTDSPTVSAIWRATLGGGPDAVEERALLRSTGRESMPVWSPDGTRVADVSDQTGSE 351

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ER 384
           +++V  +NG D+ +I+Q K        WSP    + F   +   + +  +     Q   R
Sbjct: 352 EIFVSDANGQDRVQITQFKGPRVKSVRWSPDSKGLIFDLSTDHGWEVFAVPATAGQKPVR 411

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI------NTPAYAS 438
           +L+   N    ++S  G+++ F  +       +++     G N   +        P  ++
Sbjct: 412 VLL---NANNASYSHDGKTIYFQSR------GEIWKATAAGGNPQTLAKDRGGAQPVESA 462

Query: 439 DPQWVGF 445
           D ++V +
Sbjct: 463 DGKYVYY 469



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 14/205 (6%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE---AMDIYSVDLQSNATERLTNTLFINISAS 308
           +I    +    P  S +GKR   S ++     A  ++  +L S    +LT     +I+  
Sbjct: 43  QISTGDASESYPSISPDGKRLAYSARESSKVSAFHVFVRELPSGKPLQLTKGEGNDIAPV 102

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-----VWSPQGDLIAF 363
           +SPD   + F    +GK +  VM ++G D+++I++   A+          W P    +  
Sbjct: 103 WSPDGGTLAFVRVEDGKRECIVMPADGGDERKIAELGAAADSTQPAPEVSWKPDSKSLVV 162

Query: 364 TKFSGEKF-AIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLY 419
            +   ++   +  +  DG  +R+       +    P  + SG S+ F R    D G+ ++
Sbjct: 163 VQNGEKQLPGLATLTLDGKLQRITNPGEGTEGDSTPAVAASGSSIAFVRHTQND-GADIF 221

Query: 420 SIDLNGRNETLINTPAYASDP-QWV 443
             D  G     +           W 
Sbjct: 222 LCDATGGGVRRLTFDDRGIRGIAWS 246



 Score = 96.6 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 93/304 (30%), Gaps = 63/304 (20%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T       S I FV  +   G     + + D  G  +R LT   D+ +    +S + Q +
Sbjct: 197 TPAVAASGSSIAFVRHTQNDGA---DIFLCDATGGGVRRLTFD-DRGIRGIAWSHDGQDL 252

Query: 227 AYATYD-----------DEDILRVYLMDTRIDRAP------------------------- 250
            Y+                   R Y +  +    P                         
Sbjct: 253 IYSANRAGGWRIWRVPAYGGSPREYTLGGKQAYYPTVGRNRLAYTDSPTVSAIWRATLGG 312

Query: 251 -------KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  + +         P +S +G R      +  + +I+  D       ++T     
Sbjct: 313 GPDAVEERALLRSTGRESMPVWSPDGTRVADVSDQTGSEEIFVSDANGQDRVQITQFKGP 372

Query: 304 NI-SASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLI 361
            + S  +SPDS  ++F+   +   +++ + +  G    R+      +  +  +S  G  I
Sbjct: 373 RVKSVRWSPDSKGLIFDLSTDHGWEVFAVPATAGQKPVRVLL----NANNASYSHDGKTI 428

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            F         I      G   + L +D     P  S  G+ + +  ++       ++ +
Sbjct: 429 YFQSRG----EIWKATAAGGNPQTLAKDRGGAQPVESADGKYVYYRARRS------IFRV 478

Query: 422 DLNG 425
            + G
Sbjct: 479 PVAG 482



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 51/300 (17%), Positives = 103/300 (34%), Gaps = 67/300 (22%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
              +R+ +     VS I + +L     D    R L  S  +    P +SP+  +VA  + 
Sbjct: 289 VGRNRLAYTDSPTVSAIWRATLGG-GPDAVEERALLRSTGR-ESMPVWSPDGTRVADVS- 345

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           D      +++ D    +   +I  F+   + + R+S + K  +  +  D   ++++V   
Sbjct: 346 DQTGSEEIFVSDAN-GQDRVQITQFKGPRVKSVRWSPDSKGLIFDLSTDHGWEVFAVPAT 404

Query: 291 SNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +       L N      +ASYS D   I F+S    + +++   + G + + +++D+  +
Sbjct: 405 AGQKPVRVLLNAN----NASYSHDGKTIYFQS----RGEIWKATAAGGNPQTLAKDRGGA 456

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL---------------------- 386
              PV S  G  + +       F + V   +G +  +                       
Sbjct: 457 --QPVESADGKYVYYRARR-SIFRVPVAGGEGEEAIVPEHDLSFSTTIQPVKKGVYYAEF 513

Query: 387 ---------------------------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                                       +  N  A + SP G+ L++ R     T   L 
Sbjct: 514 ERSARGTAVSFYDFTTKKSTVAFRMKNTDFWNGAAFSVSPDGKYLLYPRVDQSQTNLILV 573



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNETLINTPAYAS 438
            + ++   D++   P+ SP G+ L +S ++     +    +    +G+   L        
Sbjct: 40  KKVQISTGDASESYPSISPDGKRLAYSARESSKVSAFHVFVRELPSGKPLQLTKGEGNDI 99

Query: 439 DPQWVG 444
            P W  
Sbjct: 100 APVWSP 105


>gi|291084523|ref|ZP_06537913.2| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 120

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 44/121 (36%), Gaps = 3/121 (2%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
           M      +       +   +HA V++       +  P+ +   K+         +  +V+
Sbjct: 1   MMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVA 60

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL+ S  FN + +    Q+      + +   W++LG   ++ G V         V ++L
Sbjct: 61  ADLRNSGKFNPLDRSRLPQQPATAQEV-QPTAWSALGIDAVIVGLVTPNPDGSYNVAYQL 119

Query: 131 W 131
            
Sbjct: 120 V 120


>gi|168057343|ref|XP_001780675.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667943|gb|EDQ54561.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 710

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 101/268 (37%), Gaps = 45/268 (16%)

Query: 216 EPRFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-- 272
            P  SP+   V++  + +D   L V  +D   +R   R     S +   R+   GK    
Sbjct: 389 FPSISPDGSLVSFVDSGNDSSTLAVMKLDGSENRVIHR-----SNVFGERWDPKGKTIYA 443

Query: 273 ----LISVQKDEAMDIYSVDLQSNAT---------ERLTN-TLFINISASYSPDSSQIVF 318
               + +  K     +   D  +            + LT      N     SPD   +VF
Sbjct: 444 SQGRVFASVKTVVRIVAIQDSDTADLGADETSHNYKYLTKEGTGNNAFPCPSPDGKYVVF 503

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSG-----EKF 371
            S R G++ LY+M + G ++K + +  E  + D  P WSP  + IAF+           F
Sbjct: 504 RSGRTGRKNLYIMDAAGGEEKYLRRLTEGRWRDTMPAWSPDNEWIAFSSNRAHPTGERSF 563

Query: 372 AIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDG------------DTGS 416
           ++ +++ +G+   +L++           +SP  + + F+    G                
Sbjct: 564 SLYLIRPNGTDLHMLLDTGVGGLAMHAVFSPDSKRIAFTSNWAGVSAEPISFPHAYQPYG 623

Query: 417 KLYSIDLNGRNETLINTPAY-ASDPQWV 443
            ++ I+++G   T +   AY    P W 
Sbjct: 624 TIFVINIDGTGLTRLTHNAYEDGTPTWG 651



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/327 (16%), Positives = 97/327 (29%), Gaps = 90/327 (27%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR--APKRIGNF 256
           DG+  R +  +       P +  +   V +    D+    ++ ++         +R+   
Sbjct: 234 DGSQRRMIVRNGG----WPTWM-DDNTVYFHRIADDGWWSIFKVNVSDTSADQAERVTPS 288

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---------- 306
                 P  S +GK   ++ ++     I   +L+S     LT  +  N            
Sbjct: 289 GVHAFTPAASRSGKWIAVATRRASFRHIEIFELESKKFFPLTALINPNTHHYNPFVSPSS 348

Query: 307 -----------------------------------------ASYSPDSSQIVFESDREGK 325
                                                     S SPD S + F       
Sbjct: 349 NKIGYHRCRGLDQDAQTVDPQIEYQKSPLPGVSLARIKGSFPSISPDGSLVSFVDSGNDS 408

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI------AFTKFSGEKFAIGVMKKD 379
             L VM+ +GS+ + I     ++ F   W P+G  I       F         + +   D
Sbjct: 409 STLAVMKLDGSENRVI---HRSNVFGERWDPKGKTIYASQGRVFASVKTVVRIVAIQDSD 465

Query: 380 GSQE---------RLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +           + L +    N   P  SP G+ ++F   + G     LY +D  G  E
Sbjct: 466 TADLGADETSHNYKYLTKEGTGNNAFPCPSPDGKYVVFRSGRTGRK--NLYIMDAAGGEE 523

Query: 429 T----------LINTPAYASDPQWVGF 445
                          PA++ D +W+ F
Sbjct: 524 KYLRRLTEGRWRDTMPAWSPDNEWIAF 550



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 30/215 (13%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD----- 279
           + A          R+ L+  R++   K   N R  ++   F        +S ++D     
Sbjct: 115 RFAIDRLPTRSSRRIELLADRLNAPSKAFLNDRPSMIGDVF------IFVSTEEDVGKPV 168

Query: 280 -EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ---------LY 329
                +YS++  ++  +RLT     + S + SP    +   S+     Q         LY
Sbjct: 169 QGWNAVYSLNFITSVVKRLTPPGITDYSPAVSPSGEWVAVGSNEGRGWQREIEALNLDLY 228

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQ----ER 384
           + ++    Q+R+          P W      + F +      ++I  +    +     ER
Sbjct: 229 IFKAEDGSQRRMIVRNGG---WPTWMDDNT-VYFHRIADDGWWSIFKVNVSDTSADQAER 284

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +     +   P  S SG+ +  + ++      +++
Sbjct: 285 VTPSGVHAFTPAASRSGKWIAVATRRASFRHIEIF 319



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 59/202 (29%), Gaps = 55/202 (27%)

Query: 118 KEGKDRLRV---------EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
                +  V            + D    ++   ++       WR      S D       
Sbjct: 494 PSPDGKYVVFRSGRTGRKNLYIMDAAGGEEKYLRRLT--EGRWRDTMPAWSPD------N 545

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR-DQILFEPRFSPNQQKVA 227
           E   F+S     + +  +G    SL ++  +G ++  L  +    +     FSP+ +++A
Sbjct: 546 EWIAFSS-----NRAHPTGERSFSLYLIRPNGTDLHMLLDTGVGGLAMHAVFSPDSKRIA 600

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           + +                        N+  +   P                    I+ +
Sbjct: 601 FTS------------------------NWAGVSAEP--------ISFPHAYQPYGTIFVI 628

Query: 288 DLQSNATERLTNTLFINISASY 309
           ++      RLT+  + + + ++
Sbjct: 629 NIDGTGLTRLTHNAYEDGTPTW 650


>gi|325915282|ref|ZP_08177602.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325538475|gb|EGD10151.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 781

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 11/231 (4%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               +  +       P  SP+   VAYA+  ++      L+ T  +  P+ +      I 
Sbjct: 218 RPYQVITAGGGFDLTPSLSPDGSMVAYASLTNDRPGTSILVKTTDNAYPRVLETPAPGIS 277

Query: 262 A--PRFSSNGKRALISVQK-DEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQI 316
              P +S +G+    S Q  D +  I        +  R  +       +S S+SPD   +
Sbjct: 278 DRLPAWSPDGREIAFSRQAPDGSCRIMIAAAAGESAAREVVRCDGADMLSFSWSPDGRAL 337

Query: 317 VFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFA 372
           +F S     G  ++  +         +S + + + FD  P +SP G  I F +       
Sbjct: 338 LFGSMTGARGAPRIRRLDLETGQWHALSYNAQPADFDYAPRYSPDGQWIVFLRNPQLGDL 397

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +  + GS ERL  ++++++  +W P G SL+F R+ D +  ++LY +DL
Sbjct: 398 WRIPAQGGSAERLTHDNADIRGWSWLPDGSSLVFGRRVDSE--ARLYRLDL 446



 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 76/462 (16%), Positives = 136/462 (29%), Gaps = 89/462 (19%)

Query: 41  NSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF 100
           +S     + +A             V                +SQ +         + PR 
Sbjct: 127 SSGRQEAMQVAPLPTDEASTAAEAVH-------------RPMSQAAMSPSPLLAAATPRR 173

Query: 101 QDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD 160
             W +L    +    V+      L +     DV     ++G     SP            
Sbjct: 174 GRWMALAVAGITLALVLGLAARTLWLRAPATDVATSTAVLG-----SPKRP--------- 219

Query: 161 DIYQSITGEKGDFNSRILFVSESVV------SGIIKNSLCVMDRDGANIRYLTPSRDQI- 213
             YQ IT   G   +  L    S+V      +     S+ V   D A  R L      I 
Sbjct: 220 --YQVITAGGGFDLTPSLSPDGSMVAYASLTNDRPGTSILVKTTDNAYPRVLETPAPGIS 277

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRA 272
              P +SP+ +++A++    +   R+ +     + A + +       + +  +S +G+  
Sbjct: 278 DRLPAWSPDGREIAFSRQAPDGSCRIMIAAAAGESAAREVVRCDGADMLSFSWSPDGRAL 337

Query: 273 LISVQKD--EAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKEQ 327
           L         A  I  +DL++     L+        + +  YSPD   IVF  + +    
Sbjct: 338 LFGSMTGARGAPRIRRLDLETGQWHALSYNAQPADFDYAPRYSPDGQWIVFLRNPQ-LGD 396

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK--------- 378
           L+ + + G   +R++ D  A      W P G  + F +    +  +  +           
Sbjct: 397 LWRIPAQGGSAERLTHD-NADIRGWSWLPDGSSLVFGRRVDSEARLYRLDLVDRSLHDLG 455

Query: 379 ---------------------------------DGS--QERLLVEDSNLQAPTWSPSGRS 403
                                            +G   + RL         P  +P GR 
Sbjct: 456 VDDAQAPDVAHGHLVFVQRKPQFGVYQVIHDPMNGGYIRRRLFASSGRDDQPMIAPDGRQ 515

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-WVG 444
           LIF+  + G  G     +   G    +      A     W  
Sbjct: 516 LIFASNRSGAYGLWWGDVGKPGSVRLIEGIRPDARQAADWSA 557



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/176 (22%), Positives = 73/176 (41%), Gaps = 21/176 (11%)

Query: 292 NATER----LTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQD 344
            + +R    +T     +++ S SPD S + + S   DR G   L     N   +   +  
Sbjct: 214 GSPKRPYQVITAGGGFDLTPSLSPDGSMVAYASLTNDRPGTSILVKTTDNAYPRVLETPA 273

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
              S   P WSP G  IAF++ + +            +  ++E +  + +++ + +WSP 
Sbjct: 274 PGISDRLPAWSPDGREIAFSRQAPDGSCRIMIAAAAGESAAREVVRCDGADMLSFSWSPD 333

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT---------PAYASDPQWVGFM 446
           GR+L+F          ++  +DL  G+   L            P Y+ D QW+ F+
Sbjct: 334 GRALLFGSMTGARGAPRIRRLDLETGQWHALSYNAQPADFDYAPRYSPDGQWIVFL 389



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 90/310 (29%), Gaps = 54/310 (17%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-ED 235
           +LF S +   G  +     ++    +            + PR+SP+ Q + +       D
Sbjct: 337 LLFGSMTGARGAPRIRRLDLETGQWHALSYNAQPADFDYAPRYSPDGQWIVFLRNPQLGD 396

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT- 294
           + R+       +R      + R       +  +G   +   + D    +Y +DL   +  
Sbjct: 397 LWRIPAQGGSAERLTHDNADIRGW----SWLPDGSSLVFGRRVDSEARLYRLDLVDRSLH 452

Query: 295 ------------------------------------------ERLTNTLFINISASYSPD 312
                                                      RL  +   +     +PD
Sbjct: 453 DLGVDDAQAPDVAHGHLVFVQRKPQFGVYQVIHDPMNGGYIRRRLFASSGRDDQPMIAPD 512

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKF 371
             Q++F S+R G   L+          R+ +  +  +     WS     +  +    +  
Sbjct: 513 GRQLIFASNRSGAYGLWWGDVGKPGSVRLIEGIRPDARQAADWSADSRQVLVSGSDADGH 572

Query: 372 A--IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS-RKKDGDTGSKLYSIDLNGRNE 428
           A    V    G   RL V  +        P  + L+      DG T + LY  D +    
Sbjct: 573 AALFEVTPSTGKTVRLPVPQARPLQAIHLPDPKRLLVVGAADDGHTFATLY--DRSSNPW 630

Query: 429 TLINTPAYAS 438
            ++ T    S
Sbjct: 631 RVLATLQDVS 640


>gi|1335976|gb|AAB01192.1| apical gut membrane polyprotein [Haemonchus contortus]
          Length = 822

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 86/222 (38%), Gaps = 31/222 (13%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
              A+  +   DI +V      +D    +I            S +GK+ + + ++   +D
Sbjct: 145 SGHAWDVFPTYDIFKVNEYGNVLD----QITKNDVYDSEAFISPDGKKIVYTSKQSGDLD 200

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK------------------ 325
           ++  D+      +LT     +  AS+SPD  +IVF + R                     
Sbjct: 201 LWITDINGALKIQLTKAKGYDGGASFSPDGEKIVFHASRPTTKDKIDIYDHLLENDLVAM 260

Query: 326 --EQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSG----EKFAIGVMKK 378
              +LYVM ++G D++ + +         P + P    I F+  +      +F + ++ +
Sbjct: 261 SEMELYVMNADGIDKRSVFKQPRGGLNWTPYYHPDNKRIIFSSNTNSTKPSEFHLYIVNE 320

Query: 379 DGSQ-ERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKL 418
           DG+  ER+        A P +S  G+ +++S  +       L
Sbjct: 321 DGTGLERVTFGSGYFNAFPVFSHDGKKVVWSSNRGSTKKGDL 362



 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 86/221 (38%), Gaps = 31/221 (14%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
              T+D      +++++ +     K++ +          S +GK    +  +   +++++
Sbjct: 543 TVYTWDIYPEFDIFMVN-KYGNIVKQLTDEPGYNAEAVLSPDGKTIAFTSIRTGDLELWT 601

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-------------------- 326
           ++       ++T     +    +SPD  ++VF + R   +                    
Sbjct: 602 MNTDGTNLHQVTKEYGYDGGCFFSPDGKRLVFRASRPKTQKEKEKYQKLLDYGLVEPTLT 661

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDG 380
           ++YV+  +G + K+++    AS+  P + P    I F+            FA+ V+ +DG
Sbjct: 662 EIYVVDVDGKNLKQVTNFGVASW-APYYLPDNKRIIFSSNYNMSAKQFGSFALYVINEDG 720

Query: 381 SQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKL 418
           +    +      Q    P ++ +G  L++   ++   G+ L
Sbjct: 721 TGLERVTFGEGYQFNAFPMFNRAGNKLVWGSSRNRTKGASL 761



 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 70/185 (37%), Gaps = 26/185 (14%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           + +       DI+ V+   N  ++LT+    N  A  SPD   I F S R G  +L+ M 
Sbjct: 544 VYTWDIYPEFDIFMVNKYGNIVKQLTDEPGYNAEAVLSPDGKTIAFTSIRTGDLELWTMN 603

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------------------A 372
           ++G++  +++++         +SP G  + F     +                       
Sbjct: 604 TDGTNLHQVTKE-YGYDGGCFFSPDGKRLVFRASRPKTQKEKEKYQKLLDYGLVEPTLTE 662

Query: 373 IGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKD---GDTGS-KLYSIDLNGRN 427
           I V+  DG   + +        AP + P  + +IFS   +      GS  LY I+ +G  
Sbjct: 663 IYVVDVDGKNLKQVTNFGVASWAPYYLPDNKRIIFSSNYNMSAKQFGSFALYVINEDGTG 722

Query: 428 ETLIN 432
              + 
Sbjct: 723 LERVT 727



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 31/206 (15%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             +  ++  G N+       D    E   SP+ +K+ Y +    D   + L  T I+ A 
Sbjct: 155 YDIFKVNEYG-NVLDQITKNDVYDSEAFISPDGKKIVYTSKQSGD---LDLWITDINGAL 210

Query: 251 K-RIGNFRSMILAPRFSSNGKRALISVQKDEAMD--------------------IYSVDL 289
           K ++   +       FS +G++ +    +    D                    +Y ++ 
Sbjct: 211 KIQLTKAKGYDGGASFSPDGEKIVFHASRPTTKDKIDIYDHLLENDLVAMSEMELYVMNA 270

Query: 290 QSNATERLTNTL--FINISASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQKRISQ 343
                  +       +N +  Y PD+ +I+F S+    +     LY++  +G+  +R++ 
Sbjct: 271 DGIDKRSVFKQPRGGLNWTPYYHPDNKRIIFSSNTNSTKPSEFHLYIVNEDGTGLERVTF 330

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGE 369
                   PV+S  G  + ++   G 
Sbjct: 331 GSGYFNAFPVFSHDGKKVVWSSNRGS 356



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 81/209 (38%), Gaps = 30/209 (14%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  + ++++ G NI            E   SP+ + +A+ +    D L ++ M+T   
Sbjct: 550 YPEFDIFMVNKYG-NIVKQLTDEPGYNAEAVLSPDGKTIAFTSIRTGD-LELWTMNTD-G 606

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--------------------MDIYSV 287
               ++           FS +GKR +    + +                      +IY V
Sbjct: 607 TNLHQVTKEYGYDGGCFFSPDGKRLVFRASRPKTQKEKEKYQKLLDYGLVEPTLTEIYVV 666

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRI 341
           D+     +++TN    + +  Y PD+ +I+F S+        G   LYV+  +G+  +R+
Sbjct: 667 DVDGKNLKQVTNFGVASWAPYYLPDNKRIIFSSNYNMSAKQFGSFALYVINEDGTGLERV 726

Query: 342 SQDKEASYFD-PVWSPQGDLIAFTKFSGE 369
           +  +   +   P+++  G+ + +      
Sbjct: 727 TFGEGYQFNAFPMFNRAGNKLVWGSSRNR 755



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 59/148 (39%), Gaps = 23/148 (15%)

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           V+  D   +  ++++   G+  K+++ +   +  + V SP G  IAFT        +  M
Sbjct: 544 VYTWDIYPEFDIFMVNKYGNIVKQLTDEPGYNA-EAVLSPDGKTIAFTSIRTGDLELWTM 602

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG------------------DTGSK 417
             DG+    + ++        +SP G+ L+F   +                     T ++
Sbjct: 603 NTDGTNLHQVTKEYGYDGGCFFSPDGKRLVFRASRPKTQKEKEKYQKLLDYGLVEPTLTE 662

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVGF 445
           +Y +D++G+N   +     AS   W  +
Sbjct: 663 IYVVDVDGKNLKQVTNFGVAS---WAPY 687



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/312 (17%), Positives = 97/312 (31%), Gaps = 59/312 (18%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D I ++   +   F S                 L + D +GA ++              F
Sbjct: 168 DQITKNDVYDSEAFISPDGKKIVYTSKQSGDLDLWITDINGA-LKIQLTKAKGYDGGASF 226

Query: 220 SPNQQKVAYATYDD--EDILRVYLMDTR------------------IDRAPKRIGNFRSM 259
           SP+ +K+ +       +D + +Y                       ID+          +
Sbjct: 227 SPDGEKIVFHASRPTTKDKIDIYDHLLENDLVAMSEMELYVMNADGIDKRSVFKQPRGGL 286

Query: 260 ILAPRFSSNGKRALISVQ----KDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSS 314
              P +  + KR + S      K     +Y V+      ER+T      N    +S D  
Sbjct: 287 NWTPYYHPDNKRIIFSSNTNSTKPSEFHLYIVNEDGTGLERVTFGSGYFNAFPVFSHDGK 346

Query: 315 QIVFESDRE----GKEQLYVMQ--------SNGSDQK------RI----SQDKEASYFDP 352
           ++V+ S+R     G   L++           + SD K      RI    +Q     + D 
Sbjct: 347 KVVWSSNRGSTKKGDLNLFIADWVDPGRDTDDESDAKEELRTNRIPKKATQKNAMRWQDT 406

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           V +P  +      ++GE+             + L          +S     +I      G
Sbjct: 407 VTTPYDN---VVHYTGERRL--------KNVKQLTFRGQNAEGYFSYDDSKIILQATGYG 455

Query: 413 DTGSKLYSIDLN 424
            T  ++Y +DLN
Sbjct: 456 TTCDQIYELDLN 467



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 4/76 (5%)

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NE 428
           + I  + + G+    + ++    +  + SP G+ ++++ K+ GD    L+  D+NG    
Sbjct: 155 YDIFKVNEYGNVLDQITKNDVYDSEAFISPDGKKIVYTSKQSGD--LDLWITDINGALKI 212

Query: 429 TLINTPAYASDPQWVG 444
            L     Y     +  
Sbjct: 213 QLTKAKGYDGGASFSP 228


>gi|239997142|ref|ZP_04717666.1| amidohydrolase [Alteromonas macleodii ATCC 27126]
          Length = 714

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 53/256 (20%), Positives = 97/256 (37%), Gaps = 43/256 (16%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS-----SNGKRALISVQKDEAM 282
           YA  D E+     L    +   P  +           +S      NG+  +     D   
Sbjct: 26  YAQNDSEEKTESELETWEVSNPPYALNEVTIKTNETTWSSLDVAPNGEFMVF----DMLG 81

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Y V +       LT     NI  S SPD  QI F SD++G   ++VM  +GS+ ++++
Sbjct: 82  DLYKVSMSGGDATPLTQDFAWNIHPSISPDGKQIAFISDKDGLSNVWVMDIDGSNLRQVT 141

Query: 343 QDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKKDGSQERLL-------VEDS 390
           ++K      P WSP G+ +       +  S     I +  K G     +        +  
Sbjct: 142 KEKSNLIHSPKWSPDGEYLVVTKGIMSSRSIPAGEIWMYHKSGGDGLQIKARNSGKRDQQ 201

Query: 391 NLQAPTWSPSGRSLIFSRK--------KDGDTGSKLYSID------------LNGRNETL 430
           N+  P +S  G+ + F+           + D    +++I             ++G    +
Sbjct: 202 NIADPVFSHDGKYIYFTENTVPGARFEYNRDPLEGIFAITRYDRETGEESRYISGTGGAV 261

Query: 431 INTPAYASDPQWVGFM 446
           + TP  + D +++ F+
Sbjct: 262 VPTP--SPDGKYIAFV 275



 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 69/414 (16%), Positives = 141/414 (34%), Gaps = 86/414 (20%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVL---VTGRVIKEGKDRLRV----EFRLWDVK 134
           ++   + Q  +   +    + W           VT +  +     L V    EF ++D  
Sbjct: 21  VAPTLYAQNDSEEKTESELETWEVSNPPYALNEVTIKTNETTWSSLDVAPNGEFMVFD-- 78

Query: 135 DRKQIIGKKFFSSPA--SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
               ++G  +  S +      +    + +I+ SI+ +      +I F+S         ++
Sbjct: 79  ----MLGDLYKVSMSGGDATPLTQDFAWNIHPSISPDG----KQIAFIS----DKDGLSN 126

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----YATYDDEDILRVYLMDTRIDR 248
           + VMD DG+N+R +T  +  ++  P++SP+ + +       +        +++       
Sbjct: 127 VWVMDIDGSNLRQVTKEKSNLIHSPKWSPDGEYLVVTKGIMSSRSIPAGEIWMYHKSGGD 186

Query: 249 APKRIGNFRS-----MILAPRFSSNGKRALIS----------VQKD---EAMDIYSVDLQ 290
             +             I  P FS +GK    +            +D       I   D +
Sbjct: 187 GLQIKARNSGKRDQQNIADPVFSHDGKYIYFTENTVPGARFEYNRDPLEGIFAITRYDRE 246

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-------- 342
           +    R  +     +  + SPD   I F    + +  L++       +  ++        
Sbjct: 247 TGEESRYISGTGGAVVPTPSPDGKYIAFVRRVKDRTALFIKDIKTGVETPLTLELERDMQ 306

Query: 343 --QDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVED---------- 389
                E  +    W P    I +  ++G KF  I V  K  S   + VE           
Sbjct: 307 EGFGSEGYFAYFDWMPDSSEIVY--WTGGKFHTINVKDKTTSTMDVTVEGTVKFADALRF 364

Query: 390 --------SNLQAPTW---SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431
                    +++   W   SP+G+S++F          KLY  D+ +G+ + L 
Sbjct: 365 DVDVAPDEFDVRMIRWSQMSPNGKSVLF------QALGKLYVRDVKSGKIKRLT 412



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 63/320 (19%), Positives = 118/320 (36%), Gaps = 52/320 (16%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGII-----KNSLCVMDRDGANIRYLTPSRD 211
             +D +   +     +F+ R++  S+   +G          L V D     I+ LT   D
Sbjct: 357 KFADALRFDVDVAPDEFDVRMIRWSQMSPNGKSVLFQALGKLYVRDVKSGKIKRLTKQND 416

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              + PRFS + + + Y T++D+D+  V ++  R     K +       + P FS++G++
Sbjct: 417 HDEYYPRFSNDGKSIVYTTWNDQDLGTVRVVSAR-GGKGKVVTQQPGHYIEPSFSADGEK 475

Query: 272 ALISVQKDE---------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            +                   IY  DL+ +  E++++  +    A ++ ++ ++ F    
Sbjct: 476 VVFRKFTGGYLLDPKYSVEPGIYVADLEKDTVEKVSDGGYN---AHFAGNNDRVYFTESA 532

Query: 323 EG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            G    + QL  +   G+D KR          +   S     +AF       F   V   
Sbjct: 533 GGEAYYETQLSSVNLKGND-KRTHLYGADKVSEYKLSHDKKWVAFVYQ----FKTYVAPF 587

Query: 379 DGSQERLLVEDSNLQAP------------TWSPSGRSL-------IFSRKKDGDTGSKLY 419
             + +R+ +  +    P            TWSP  ++L       +FSR  D        
Sbjct: 588 VENGKRITIGPNMTSLPVTQLSSRAGEYLTWSPDNKTLSWFNGPTLFSRSLDEAFAF--- 644

Query: 420 SIDLNGRNETLINTPAYASD 439
              ++G  ETL    A   D
Sbjct: 645 ---VDGAAETLPEPVAEGMD 661



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 96/275 (34%), Gaps = 44/275 (16%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS------MILA 262
             +       + P+  ++ Y T      + V    T             +      + +A
Sbjct: 310 GSEGYFAYFDWMPDSSEIVYWTGGKFHTINVKDKTTSTMDVTVEGTVKFADALRFDVDVA 369

Query: 263 P--------RFS---SNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYS 310
           P        R+S    NGK  L          +Y  D++S   +RLT           +S
Sbjct: 370 PDEFDVRMIRWSQMSPNGKSVLFQA----LGKLYVRDVKSGKIKRLTKQNDHDEYYPRFS 425

Query: 311 PDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            D   IV+ +  +     + V+ + G   K ++Q +   Y +P +S  G+ + F KF+G 
Sbjct: 426 NDGKSIVYTTWNDQDLGTVRVVSARGGKGKVVTQ-QPGHYIEPSFSADGEKVVFRKFTGG 484

Query: 370 ---------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT--GSKL 418
                    +  I V   +      + +        ++ +   + F+    G+    ++L
Sbjct: 485 YLLDPKYSVEPGIYVADLEKDTVEKVSDGGYNAH--FAGNNDRVYFTESAGGEAYYETQL 542

Query: 419 YSIDLNGRNETLINTPAY-------ASDPQWVGFM 446
            S++L G ++      A        + D +WV F+
Sbjct: 543 SSVNLKGNDKRTHLYGADKVSEYKLSHDKKWVAFV 577


>gi|116625010|ref|YP_827166.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228172|gb|ABJ86881.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 896

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 82/229 (35%), Gaps = 9/229 (3%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ- 277
           FS     +A+ T       ++   D   +R      +       P  S +G+   + V+ 
Sbjct: 591 FSVGGGNLAFRTGQPSPGGQLVWYDRAGNRLGTVGPSADYTN--PALSPDGRLLAVCVRD 648

Query: 278 -KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                 DI+  DL    + RLT     + + ++SPD   I+F SDR+G   LY   ++G+
Sbjct: 649 PATRKRDIWVYDLARGTSSRLTFDPADDFNPTWSPDGQSIIFASDRKGARDLYRKLASGT 708

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQA 394
                            W+P G  + F      K  + ++      +   +L    +   
Sbjct: 709 GPDEPLFQSGEDKSPEHWTPDGKFLLF-NTGSLKHDVWMLPLSDTRTPVAVLNGQFSSHE 767

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              SP+G+ + +   + G +   + +    G    +        +PQW 
Sbjct: 768 SQVSPNGKWIAYVSNESGKSEVFVQNFPPAGGKWPISTAGG--MEPQWS 814



 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 103/304 (33%), Gaps = 13/304 (4%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           + L+D  D   +  + F ++       A  I++ + + I      F+     ++      
Sbjct: 548 YLLFDRNDA--MFAQAFDATRLRLSGEAFPIAEQVSRLIVIAGAHFSVGGGNLAFRTGQP 605

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L   DR G  +  + PS D     P  SP+ + +A    D     R   +     
Sbjct: 606 SPGGQLVWYDRAGNRLGTVGPSADYTN--PALSPDGRLLAVCVRDPATRKRDIWVYDLAR 663

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
               R+    +    P +S +G+  + +  +  A D+Y         +        + S 
Sbjct: 664 GTSSRLTFDPADDFNPTWSPDGQSIIFASDRKGARDLYRKLASGTGPDEPLFQSGEDKSP 723

Query: 308 -SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             ++PD   ++F +    K  ++++  + +       + + S  +   SP G  IA+   
Sbjct: 724 EHWTPDGKFLLFNTG-SLKHDVWMLPLSDTRTPVAVLNGQFSSHESQVSPNGKWIAYVSN 782

Query: 367 SGEKFAIGVMK--KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              K  + V      G +  +         P WS  G  L + +         ++  D  
Sbjct: 783 ESGKSEVFVQNFPPAGGKWPISTAGG--MEPQWSRDGSELFYIQDSQ---LMAVFVKDTG 837

Query: 425 GRNE 428
           GR E
Sbjct: 838 GRFE 841



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 53/274 (19%), Positives = 90/274 (32%), Gaps = 22/274 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILF----EPRFSPNQQKVAYATYDDEDILRVYL 241
           +G     L  +   G     +  +    L      P F P+     Y+        R   
Sbjct: 462 AGESGTRLWRVSAAGGTPAPMPFANSANLSTTRTWPSFLPDGNHFLYSATSARTEDRGVW 521

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY---SVDLQSNA---TE 295
           + +     P RI          ++S+ G   L           +    + L   A    E
Sbjct: 522 VGSLDSAPPVRI--LPDFETNAQYSAPG-YLLFDRNDAMFAQAFDATRLRLSGEAFPIAE 578

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           +++  + I   A +S     + F   R G       ++  + +  +  +    A Y +P 
Sbjct: 579 QVSRLIVI-AGAHFSVGGGNLAF---RTGQPSPGGQLVWYDRAGNRLGTVGPSADYTNPA 634

Query: 354 WSPQGDLIAFTKFSG--EKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            SP G L+A         K  I V     G+  RL  + ++   PTWSP G+S+IF+  +
Sbjct: 635 LSPDGRLLAVCVRDPATRKRDIWVYDLARGTSSRLTFDPADDFNPTWSPDGQSIIFASDR 694

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            G            G +E L  +    S   W  
Sbjct: 695 KGARDLYRKLASGTGPDEPLFQSGEDKSPEHWTP 728



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 79/267 (29%), Gaps = 36/267 (13%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQK--------VAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +R+++ S  QI   P  +  +++         +        +  ++  +   +    R  
Sbjct: 297 LRWISQSSSQIALAPAVAATRKRRIGAAAIAASVLAIALAALAAIHFREKAPESRVARFL 356

Query: 255 NFRSMIL----APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                       P  S +G +   +    +   I    L S   + L  T        +S
Sbjct: 357 VDPPGTFRWFDTPAVSPDGTQVAFTSATPKGSSILLRTLDSPVLKPLPGTE-EGSFPFWS 415

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   + F +      +L  +         I   +  +     WSP  D I F   SG +
Sbjct: 416 PDGKNLGFIAQ----GKLKKLNLASGIVASI--CEARTSCCGTWSPN-DTILFAGESGTR 468

Query: 371 FAIGVMKKDGSQE--------RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +  +   G             L        P++ P G   ++S          ++   
Sbjct: 469 --LWRVSAAGGTPAPMPFANSANLSTTRTW--PSFLPDGNHFLYSATSARTEDRGVWVGS 524

Query: 423 LNGRNETLI----NTPAYASDPQWVGF 445
           L+      I     T A  S P ++ F
Sbjct: 525 LDSAPPVRILPDFETNAQYSAPGYLLF 551


>gi|262199346|ref|YP_003270555.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haliangium ochraceum DSM 14365]
 gi|262082693|gb|ACY18662.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haliangium ochraceum DSM 14365]
          Length = 656

 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 84/190 (44%), Gaps = 10/190 (5%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G R   +        ++ VD       +LT    +  S ++SPD + + + +DR
Sbjct: 74  PALSPDGSRVAFATDTTGKPQLWVVDAAGGWPTQLTFGESV-TSHAWSPDGAWLFYGADR 132

Query: 323 EGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKK 378
            G E+   Y++  +G  ++ +    +A      +SP G  IA+  T+ +G  F + V+  
Sbjct: 133 GGNEREGFYLISPDGLRERELLAPSDAFRVFGGFSPDGTRIAYSTTERNGLDFDVHVLDL 192

Query: 379 DGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--- 434
              ++R +   S      +W P G++L+ S  + G+ G+ L+ ++L     T +  P   
Sbjct: 193 RSGEDREVYRGSMGFFVSSWRPDGQALLLSEVR-GEDGNDLHLLELASGELTPLYQPEVA 251

Query: 435 AYASDPQWVG 444
           A  S   W  
Sbjct: 252 AGFSSFAWAP 261



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 82/235 (34%), Gaps = 14/235 (5%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             +P  SP+  +VA+AT           +       P ++  F   + +  +S +G    
Sbjct: 71  AQQPALSPDGSRVAFATDTTGKPQ--LWVVDAAGGWPTQLT-FGESVTSHAWSPDGAWLF 127

Query: 274 ISVQKDEAMD--IYSVDLQS-NATERLTNTLFINISASYSPDSSQIVF-ESDREGKE-QL 328
               +        Y +        E L  +    +   +SPD ++I +  ++R G +  +
Sbjct: 128 YGADRGGNEREGFYLISPDGLRERELLAPSDAFRVFGGFSPDGTRIAYSTTERNGLDFDV 187

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLV 387
           +V+     + + +       +F   W P G  +  ++  GE    + +++    +   L 
Sbjct: 188 HVLDLRSGEDREV-YRGSMGFFVSSWRPDGQALLLSEVRGEDGNDLHLLELASGELTPLY 246

Query: 388 ED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +    +   +  W+P       +   + D    L   D       L+ TP +  +
Sbjct: 247 QPEVAAGFSSFAWAPDSGGFYMASDLERDF-HALAWHDAATGELALLETPEHDVE 300



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 96/268 (35%), Gaps = 17/268 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           SR+ F +++      K  L V+D  G     LT           +SP+   + Y      
Sbjct: 81  SRVAFATDTTG----KPQLWVVDAAGGWPTQLTFGESVTSH--AWSPDGAWLFYGADRGG 134

Query: 235 DILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--QKDEAMDIYSVDLQS 291
           +     YL+     R  + +    +  +   FS +G R   S   +     D++ +DL+S
Sbjct: 135 NEREGFYLISPDGLRERELLAPSDAFRVFGGFSPDGTRIAYSTTERNGLDFDVHVLDLRS 194

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDK-EASY 349
                +         +S+ PD   ++    R      L++++    +   + Q +  A +
Sbjct: 195 GEDREVYRGSMGFFVSSWRPDGQALLLSEVRGEDGNDLHLLELASGELTPLYQPEVAAGF 254

Query: 350 FDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS 407
               W+P              F  +        +  LL   + +++    +  GR L ++
Sbjct: 255 SSFAWAPDSGGFYMASDLERDFHALAWHDAATGELALLETPEHDVEDVVLTRDGRYLAWT 314

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPA 435
             + G   S L++ DL  + +  +  PA
Sbjct: 315 TNEGG--YSVLHARDL--KEQRALAVPA 338



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 41/106 (38%), Gaps = 1/106 (0%)

Query: 333 SNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             G+ +  I+      S   P  SP G  +AF   +  K  + V+   G     L    +
Sbjct: 54  LAGAPRPDITRFLHVRSAQQPALSPDGSRVAFATDTTGKPQLWVVDAAGGWPTQLTFGES 113

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           + +  WSP G  L +   + G+     Y I  +G  E  +  P+ A
Sbjct: 114 VTSHAWSPDGAWLFYGADRGGNEREGFYLISPDGLRERELLAPSDA 159



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 8/80 (10%)

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL- 430
            IG+           +   + Q P  SP G  + F+    G    +L+ +D  G   T  
Sbjct: 51  DIGLAGAPRPDITRFLHVRSAQQPALSPDGSRVAFATDTTGK--PQLWVVDAAGGWPTQL 108

Query: 431 -----INTPAYASDPQWVGF 445
                + + A++ D  W+ +
Sbjct: 109 TFGESVTSHAWSPDGAWLFY 128


>gi|218921784|emb|CAW30773.1| P100-GA [Haemonchus contortus]
          Length = 746

 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 86/221 (38%), Gaps = 31/221 (14%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
              T+D      ++++ ++     K++ +          S +GK    +  +   +++++
Sbjct: 525 TVYTWDIYPEFDIFMV-SKYGNIVKQLTDEPGYNAEAVLSPDGKTIAFTSIRTGDLELWT 583

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-------------------- 326
           ++       ++T     +    +SPD  ++VF + R   +                    
Sbjct: 584 MNTDGTNLHQVTKEYGYDGGCFFSPDGKRLVFRASRPKTQKEKEKYQKLLDYGLVEPTLT 643

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDG 380
           ++YV+  +G + K+++    AS+  P + P    I F+            FA+ V+ +DG
Sbjct: 644 EIYVVDVDGKNLKQVTNFGVASW-APYYLPDNKRIIFSSNYNMSAKQFGSFALYVINEDG 702

Query: 381 SQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKL 418
           +    +      Q    P ++ +G  L++   ++   G+ L
Sbjct: 703 TGLERVTFGEGYQFNAFPMFNRAGNKLVWGSSRNRTKGASL 743



 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 69/185 (37%), Gaps = 26/185 (14%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           + +       DI+ V    N  ++LT+    N  A  SPD   I F S R G  +L+ M 
Sbjct: 526 VYTWDIYPEFDIFMVSKYGNIVKQLTDEPGYNAEAVLSPDGKTIAFTSIRTGDLELWTMN 585

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------------------A 372
           ++G++  +++++         +SP G  + F     +                       
Sbjct: 586 TDGTNLHQVTKE-YGYDGGCFFSPDGKRLVFRASRPKTQKEKEKYQKLLDYGLVEPTLTE 644

Query: 373 IGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKD---GDTGS-KLYSIDLNGRN 427
           I V+  DG   + +        AP + P  + +IFS   +      GS  LY I+ +G  
Sbjct: 645 IYVVDVDGKNLKQVTNFGVASWAPYYLPDNKRIIFSSNYNMSAKQFGSFALYVINEDGTG 704

Query: 428 ETLIN 432
              + 
Sbjct: 705 LERVT 709



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 90/227 (39%), Gaps = 36/227 (15%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
              A+  +   DI +V      +D    +I            S +GK+ + + ++   +D
Sbjct: 122 SGHAWDVFPTYDIFKVNEYGNVLD----QITKNDVYDSEAFISPDGKKIVHTSKQSGDLD 177

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQL-------------- 328
           ++  D+      +LT     +  AS+SPD  +IVF + R  GK+++              
Sbjct: 178 LWITDINGALKIQLTKAKGYDGGASFSPDGEKIVFHASRPTGKDKIDIYDHLLKNNLVAT 237

Query: 329 -----YVMQSNG--SDQ--KRISQDKEAS--YFDPVWSPQGDLIAFTKFSG----EKFAI 373
                 VM++N    +   +RI  ++E     + P + P    I F+         ++ +
Sbjct: 238 KKMELSVMKANTVCGNVTGERILFNRERGVLDWTPYYHPDNKRIIFSSNMNSTKSNEYHL 297

Query: 374 GVMKKDGSQ-ERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKL 418
            ++ +DG+  ER+        A P +S  G+ +++S  +       L
Sbjct: 298 YIVNEDGTGLERVTFGSGYFNAFPVFSHDGKKVVWSSNRGSTKEGDL 344



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 74/196 (37%), Gaps = 29/196 (14%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            NI            E   SP+ + +A+ +    D L ++ M+T       ++       
Sbjct: 544 GNIVKQLTDEPGYNAEAVLSPDGKTIAFTSIRTGD-LELWTMNTD-GTNLHQVTKEYGYD 601

Query: 261 LAPRFSSNGKRALISVQKDEA--------------------MDIYSVDLQSNATERLTNT 300
               FS +GKR +    + +                      +IY VD+     +++TN 
Sbjct: 602 GGCFFSPDGKRLVFRASRPKTQKEKEKYQKLLDYGLVEPTLTEIYVVDVDGKNLKQVTNF 661

Query: 301 LFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQDKEASYFD-PV 353
              + +  Y PD+ +I+F S+        G   LYV+  +G+  +R++  +   +   P+
Sbjct: 662 GVASWAPYYLPDNKRIIFSSNYNMSAKQFGSFALYVINEDGTGLERVTFGEGYQFNAFPM 721

Query: 354 WSPQGDLIAFTKFSGE 369
           ++  G+ + +      
Sbjct: 722 FNRAGNKLVWGSSRNR 737



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 74/211 (35%), Gaps = 36/211 (17%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             +  ++  G N+       D    E   SP+ +K+ + +    D   + L  T I+ A 
Sbjct: 132 YDIFKVNEYG-NVLDQITKNDVYDSEAFISPDGKKIVHTSKQSGD---LDLWITDINGAL 187

Query: 251 K-RIGNFRSMILAPRFSSNGKRALISVQKDEAMD--------------------IYSVDL 289
           K ++   +       FS +G++ +    +    D                    +  +  
Sbjct: 188 KIQLTKAKGYDGGASFSPDGEKIVFHASRPTGKDKIDIYDHLLKNNLVATKKMELSVMKA 247

Query: 290 QS-----NATERLTNTL--FINISASYSPDSSQIVFESDREGK----EQLYVMQSNGSDQ 338
            +          L N     ++ +  Y PD+ +I+F S+          LY++  +G+  
Sbjct: 248 NTVCGNVTGERILFNRERGVLDWTPYYHPDNKRIIFSSNMNSTKSNEYHLYIVNEDGTGL 307

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +R++         PV+S  G  + ++   G 
Sbjct: 308 ERVTFGSGYFNAFPVFSHDGKKVVWSSNRGS 338



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 59/148 (39%), Gaps = 23/148 (15%)

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           V+  D   +  ++++   G+  K+++ +   +  + V SP G  IAFT        +  M
Sbjct: 526 VYTWDIYPEFDIFMVSKYGNIVKQLTDEPGYNA-EAVLSPDGKTIAFTSIRTGDLELWTM 584

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG------------------DTGSK 417
             DG+    + ++        +SP G+ L+F   +                     T ++
Sbjct: 585 NTDGTNLHQVTKEYGYDGGCFFSPDGKRLVFRASRPKTQKEKEKYQKLLDYGLVEPTLTE 644

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVGF 445
           +Y +D++G+N   +     AS   W  +
Sbjct: 645 IYVVDVDGKNLKQVTNFGVAS---WAPY 669



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 54/317 (17%), Positives = 98/317 (30%), Gaps = 64/317 (20%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D I ++   +   F S                 L + D +GA ++              F
Sbjct: 145 DQITKNDVYDSEAFISPDGKKIVHTSKQSGDLDLWITDINGA-LKIQLTKAKGYDGGASF 203

Query: 220 SPNQQKVAYATYDDEDILRVYLMD--------------TRIDRAPKRIGNFRS------- 258
           SP+ +K+ +         ++ + D                + +A    GN          
Sbjct: 204 SPDGEKIVFHASRPTGKDKIDIYDHLLKNNLVATKKMELSVMKANTVCGNVTGERILFNR 263

Query: 259 ----MILAPRFSSNGKRALISVQ----KDEAMDIYSVDLQSNATERLTNTLFI-NISASY 309
               +   P +  + KR + S      K     +Y V+      ER+T      N    +
Sbjct: 264 ERGVLDWTPYYHPDNKRIIFSSNMNSTKSNEYHLYIVNEDGTGLERVTFGSGYFNAFPVF 323

Query: 310 SPDSSQIVFESDRE----GKEQLYVMQ--------SNGSDQK------RI----SQDKEA 347
           S D  ++V+ S+R     G   L++           + SD K      RI    +Q    
Sbjct: 324 SHDGKKVVWSSNRGSTKEGDLNLFIADWVDPGRDTDDESDAKEELRTNRIPKKATQKNAM 383

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            + D V +P  +      ++GE+             + L          +S     +I  
Sbjct: 384 RWQDTVTTPYDN---VVHYTGERRL--------KNVKQLTFRGQNAEGYFSYDDSKIILQ 432

Query: 408 RKKDGDTGSKLYSIDLN 424
               G T  ++Y +DLN
Sbjct: 433 ATGYGTTCDQIYELDLN 449



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 70/195 (35%), Gaps = 37/195 (18%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKN----SLCVMDRDGANIRYLTP--SRDQILF 215
           I + +T E G     +L      ++          L  M+ DG N+  +T     D   F
Sbjct: 546 IVKQLTDEPGYNAEAVLSPDGKTIAFTSIRTGDLELWTMNTDGTNLHQVTKEYGYDGGCF 605

Query: 216 EPRFSPNQQKVAYATYDDE-------------------DILRVYLMDTRIDRAPKRIGNF 256
              FSP+ +++ +     +                    +  +Y++D    +  K++ NF
Sbjct: 606 ---FSPDGKRLVFRASRPKTQKEKEKYQKLLDYGLVEPTLTEIYVVDVD-GKNLKQVTNF 661

Query: 257 RSMILAPRFSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFI--NISAS 308
                AP +  + KR + S   +       +  +Y ++      ER+T       N    
Sbjct: 662 GVASWAPYYLPDNKRIIFSSNYNMSAKQFGSFALYVINEDGTGLERVTFGEGYQFNAFPM 721

Query: 309 YSPDSSQIVFESDRE 323
           ++   +++V+ S R 
Sbjct: 722 FNRAGNKLVWGSSRN 736



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 69/207 (33%), Gaps = 25/207 (12%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAM--DIYSVDLQSNATE--RLTNTLFINISA 307
           R   F +      F+S+    +            IY ++L        +++  +  + ++
Sbjct: 10  RQLTFENRNTEAYFNSDDTYLVFQATGYGVDCEQIYRLELSRPVETLAKISTGIGTSAAS 69

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + P+S  I++     G      + +     K+++ D          S     +   K  
Sbjct: 70  FFYPNSVDILY----SGNFHKTRVNA-----KKLTNDNRCPQKVCDSSKAKTDLIIKKMC 120

Query: 368 GEK--------FAIGVMKKDGSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKL 418
                      + I  + + G+    + ++    +  + SP G+ ++ + K+ GD    L
Sbjct: 121 ESGHAWDVFPTYDIFKVNEYGNVLDQITKNDVYDSEAFISPDGKKIVHTSKQSGD--LDL 178

Query: 419 YSIDLNGR-NETLINTPAYASDPQWVG 444
           +  D+NG     L     Y     +  
Sbjct: 179 WITDINGALKIQLTKAKGYDGGASFSP 205


>gi|311745523|ref|ZP_07719308.1| tol biopolymer transport system, periplasmic protein [Algoriphagus
           sp. PR1]
 gi|126578081|gb|EAZ82301.1| tol biopolymer transport system, periplasmic protein [Algoriphagus
           sp. PR1]
          Length = 305

 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 87/234 (37%), Gaps = 19/234 (8%)

Query: 193 LCVMDRDGANIRYLTPSR-DQILFEPRFSPNQQKVAYATY--DDEDILRVYLMDTRIDRA 249
           L  +   G N+ +L      +   +  +S + + +  ++   D E               
Sbjct: 69  LEKISPTGENLGFLNTGPIQRANNDHGYSFDGKTLFISSGKPDVERGGSYIYKVAAEGGN 128

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           P  I            S +GK  +    ++   DIY + +      RLT+   ++    Y
Sbjct: 129 PTLITPLSPSYWH-GVSPDGKDIVYCAPRNGNYDIYKMSVNGGEEIRLTSEESLDDGPEY 187

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL---IAF--- 363
           SPD   I   S R G  Q++ ++ +GSD ++++ D  +++F    SP   +   I +   
Sbjct: 188 SPDGKYIYINSYRTGMMQIWRIKPDGSDPEQMTFDNHSNWFA-HISPNNKVATIITYLED 246

Query: 364 ---TKFSGEKFAIGVMKKDGSQERLLVE-----DSNLQAPTWSPSGRSLIFSRK 409
                  G +  + ++  +  +   L E        +  P+W+P G    + R 
Sbjct: 247 QKEGHPFGRQVKLRLLDLETKEVTDLTEEFYGGQGTINVPSWNPEGTKFAYVRY 300



 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 20/206 (9%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           I  +Y+ D    +  + I        AP +S +G   LI    +    +  +        
Sbjct: 26  ISSLYIYDMATGK-SEMILKEDRHFEAPNWSPDGTFLLI----NSEGKLEKISPTGENLG 80

Query: 296 RLTNTL---FINISASYSPDSSQIVFESD-----REGKEQLYVMQSNGSDQKRISQDKEA 347
            L         N    YS D   + F S        G   +Y + + G +   I+    +
Sbjct: 81  FLNTGPIQRANNDHG-YSFDGKTL-FISSGKPDVERGGSYIYKVAAEGGNPTLITPLSPS 138

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIF 406
            +     SP G  I +       + I  M  +G +E RL  E+S    P +SP G+ +  
Sbjct: 139 YWHG--VSPDGKDIVYCAPRNGNYDIYKMSVNGGEEIRLTSEESLDDGPEYSPDGKYIYI 196

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLIN 432
           +  + G    +++ I  +G +   + 
Sbjct: 197 NSYRTGMM--QIWRIKPDGSDPEQMT 220



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 80/207 (38%), Gaps = 17/207 (8%)

Query: 173 FNSRILFVSESVVS-GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           F+ + LF+S          + +  +  +G N   +TP      +    SP+ + + Y   
Sbjct: 98  FDGKTLFISSGKPDVERGGSYIYKVAAEGGNPTLITPLSPS--YWHGVSPDGKDIVYCAP 155

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            + +   +Y M         R+ +  S+   P +S +GK   I+  +   M I+ +    
Sbjct: 156 RNGN-YDIYKMSVNGGEEI-RLTSEESLDDGPEYSPDGKYIYINSYRTGMMQIWRIKPDG 213

Query: 292 NATERLTNTLFINISASYSPDSSQI----VFESDREGKE-----QLYVMQSNGSDQKRIS 342
           +  E++T     N  A  SP++         E  +EG       +L ++     +   ++
Sbjct: 214 SDPEQMTFDNHSNWFAHISPNNKVATIITYLEDQKEGHPFGRQVKLRLLDLETKEVTDLT 273

Query: 343 ---QDKEASYFDPVWSPQGDLIAFTKF 366
                 + +   P W+P+G   A+ ++
Sbjct: 274 EEFYGGQGTINVPSWNPEGTKFAYVRY 300


>gi|193216325|ref|YP_001997524.1| WD40 domain-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193089802|gb|ACF15077.1| WD40 domain protein beta Propeller [Chloroherpeton thalassium ATCC
           35110]
          Length = 1114

 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 59/281 (20%), Positives = 108/281 (38%), Gaps = 29/281 (10%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSP 221
           +  IT   G F+   +++  ++     +  +   D  D   ++ LTP+         +SP
Sbjct: 318 FAFITDRNGYFD---IYIGSTIKKDEFEKIVSGQDALDFEELKILTPAI-------TWSP 367

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + +K+A AT        + L+D       K   N   +  +  +S +GK       K   
Sbjct: 368 DGKKIAIAT-KAGSSDAIMLIDVESHDTKKITFNLDGI-FSVDWSPDGKMLCFIGNKTYK 425

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            D+Y  DL+S   + LTN +F +   S+SPD  +I F SDR     +  +       + +
Sbjct: 426 SDVYIYDLESKTLQNLTNDVFSDSDPSWSPDGQKIFFVSDRTNHLNVKPIAVETDTSRAV 485

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSP 399
              +E ++              T +   +  +  +    S  R L   S  +  +P  SP
Sbjct: 486 RFTREETFD------------MTNYDYFQKDVYELSLGKSSLRRLTATSAIDESSPIVSP 533

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            G++L+F    +G     +Y +DL          P    +P
Sbjct: 534 DGKTLLFVSDLNG--IYNVYKLDLTDPGLKNTPLPEPKLEP 572



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 76/232 (32%), Gaps = 29/232 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           ++  + + + +      + L    +     +      +      +P  S  G +      
Sbjct: 269 KWVHDLKVMYWPEIAQREELESDFVKLTDHKE-----DGSGYNTSPSISPQGDKFAFITD 323

Query: 278 KDEAMDIYSVD----------------LQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           ++   DIY                   L     + LT    I    ++SPD  +I   + 
Sbjct: 324 RNGYFDIYIGSTIKKDEFEKIVSGQDALDFEELKILT--PAI----TWSPDGKKIAIATK 377

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               + + ++     D K+I+ + +   F   WSP G ++ F      K  + +   +  
Sbjct: 378 AGSSDAIMLIDVESHDTKKITFNLDG-IFSVDWSPDGKMLCFIGNKTYKSDVYIYDLESK 436

Query: 382 QERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             + L  D  +   P+WSP G+ + F   +      K  +++ +        
Sbjct: 437 TLQNLTNDVFSDSDPSWSPDGQKIFFVSDRTNHLNVKPIAVETDTSRAVRFT 488



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 17/164 (10%)

Query: 296 RLTNT----LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYF 350
           +LT+        N S S SP   +  F +DR G   +Y+  +   D+ ++I   ++A  F
Sbjct: 294 KLTDHKEDGSGYNTSPSISPQGDKFAFITDRNGYFDIYIGSTIKKDEFEKIVSGQDALDF 353

Query: 351 --------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSG 401
                      WSP G  IA    +G   AI ++  +    + +      + +  WSP G
Sbjct: 354 EELKILTPAITWSPDGKKIAIATKAGSSDAIMLIDVESHDTKKITFNLDGIFSVDWSPDG 413

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQWVG 444
           + L F   K     S +Y  DL  +    +    ++ SDP W  
Sbjct: 414 KMLCFIGNK--TYKSDVYIYDLESKTLQNLTNDVFSDSDPSWSP 455


>gi|124008206|ref|ZP_01692903.1| peptidase, S41 family [Microscilla marina ATCC 23134]
 gi|123986305|gb|EAY26127.1| peptidase, S41 family [Microscilla marina ATCC 23134]
          Length = 1066

 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 76/196 (38%), Gaps = 22/196 (11%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G +   S Q D    I+ +        RLT     + +  +S D   I F S+R
Sbjct: 30  PAISPDGNQVAFSFQGD----IWVMAANGGVARRLTIHQGYDANPIWSSDGKHIAFSSNR 85

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI------AFTKFSGEKFAIGVM 376
                ++ + +NG   KR++           W+ Q +++      A+ + + E+  I  +
Sbjct: 86  ASNYDVFTIPANGGATKRLTYHSSGDQATC-WTAQNEVLFTSRVRAYRQIAYER-EIHKV 143

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK--------KDGDTGSKLYSIDLNGRN- 427
             +G   + ++ D+    PT SP+G+ + F R           G     ++  +   +  
Sbjct: 144 SAEGGTPQRML-DAQGYMPTQSPNGKLIAFVRGTCGVVREAYQGPANRNIWIYNNETKQY 202

Query: 428 ETLINTPAYASDPQWV 443
             L N P+    P W 
Sbjct: 203 TQLTNDPSNEFQPIWS 218



 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 92/240 (38%), Gaps = 31/240 (12%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
              +P  SP+  +VA++   D     +++M        +R+   +     P +SS+GK  
Sbjct: 26  FATQPAISPDGNQVAFSFQGD-----IWVMAAN-GGVARRLTIHQGYDANPIWSSDGKHI 79

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----- 327
             S  +    D++++     AT+RLT     + +  ++   ++++F S      Q     
Sbjct: 80  AFSSNRASNYDVFTIPANGGATKRLTYHSSGDQATCWTA-QNEVLFTSRVRAYRQIAYER 138

Query: 328 -LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----------FSGEKFAIGVM 376
            ++ + + G   +R+    +A  + P  SP G LIAF +                 I + 
Sbjct: 139 EIHKVSAEGGTPQRML---DAQGYMPTQSPNGKLIAFVRGTCGVVREAYQGPANRNIWIY 195

Query: 377 KKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR---NETLIN 432
             +  Q   L  D + +  P WS    +L +   K G        ++ +G    N   I 
Sbjct: 196 NNETKQYTQLTNDPSNEFQPIWS-DDNALYYISAKSGKYNIYQQKLNTDGTANGNARQIT 254



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 94/292 (32%), Gaps = 41/292 (14%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
               +        +    + V+   +  + VM  +G   R LT         P +S + +
Sbjct: 19  QAQTQPIFATQPAISPDGNQVAFSFQGDIWVMAANGGVARRLTI-HQGYDANPIWSSDGK 77

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD- 283
            +A+++    +             A KR+    S   A  +++     L + +       
Sbjct: 78  HIAFSSNRASN--YDVFTIPANGGATKRLTYHSSGDQATCWTAQ-NEVLFTSRVRAYRQI 134

Query: 284 -----IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG----------KEQL 328
                I+ V  +    +R+ +        + SP+   I F     G             +
Sbjct: 135 AYEREIHKVSAEGGTPQRMLDAQGY--MPTQSPNGKLIAFVRGTCGVVREAYQGPANRNI 192

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-----SQE 383
           ++  +      +++ D  ++ F P+WS   + + +      K+ I   K +         
Sbjct: 193 WIYNNETKQYTQLTND-PSNEFQPIWSDD-NALYYISAKSGKYNIYQQKLNTDGTANGNA 250

Query: 384 RLLVEDSNLQAPTWSPSG-RSLIFSRKKD--GDTGSKLYSIDLN-GRNETLI 431
           R +          ++  G R    SR      +    LY+++ N G+ + L 
Sbjct: 251 RQIT--------RYTDDGIRYFGVSRNNQLVFERQISLYTMNANEGKAKKLT 294



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 103/299 (34%), Gaps = 31/299 (10%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKG--DFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           ++  + R+I     D I            F  +I   + +   G  K        D    
Sbjct: 245 TANGNARQITRYTDDGIRYFGVSRNNQLVFERQISLYTMNANEGKAKKLTIQATNDYRFD 304

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +    +    + + + +PN +   Y   +    + +  +  +  R    + +      +P
Sbjct: 305 QVTHQTYRNGVADYKVAPNGK---YVAVEIRGEIFIKPIA-KDKRKAMNLSDHAFRDESP 360

Query: 264 RFSSNGKRALISVQKDEAMDIYSV------------DLQSNATERLTNTLFINISASYSP 311
            + ++    +    ++   D+Y V             L++    +LT T     + + SP
Sbjct: 361 EWLND-STLVFISDRNGQRDLYLVRSIDKKQSNLYKTLKTKVI-QLTQTKAEEFAPTLSP 418

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQ---KRISQDKEASYFDPVWSPQGDLIAFTKFS- 367
           +  +I +   R G+ +L V   + + +   +++     A+     WSP    ++++  + 
Sbjct: 419 NGKKIAY---RRGRGELVVASISATGKLSNEKVLVKGWATPGGVAWSPDSRWLSYSLTNL 475

Query: 368 GEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                + +   + SQ    + +         WSP G  L F   +  D    ++ + LN
Sbjct: 476 NFNREVYIQAANNSQPGVNVSMHPRGDYGAVWSPDGSKLAFMSNRIND--YDVWFVWLN 532



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 54/380 (14%), Positives = 107/380 (28%), Gaps = 106/380 (27%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R   H+  D         +  F SR+    +       +  +  +  +G   + +    D
Sbjct: 103 RLTYHSSGDQATCWTAQNEVLFTSRVRAYRQI----AYEREIHKVSAEGGTPQRML---D 155

Query: 212 QILFEPRFSPNQQKVAYAT---------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
              + P  SPN + +A+           Y       +++ +    +  + + N  S    
Sbjct: 156 AQGYMPTQSPNGKLIAFVRGTCGVVREAYQGPANRNIWIYNNETKQYTQ-LTNDPSNEFQ 214

Query: 263 PRFSSNGKRALISVQKDEAMDIYS--VDLQS---NATERLTNTLFINISASYSPDSSQIV 317
           P +S +         K    +IY   ++          ++T      I       ++Q+V
Sbjct: 215 PIWSDD-NALYYISAKSGKYNIYQQKLNTDGTANGNARQITRYTDDGIRYFGVSRNNQLV 273

Query: 318 FESDREGKEQLYVMQSNGSDQKRIS--------------QDKEASYFDPVWSPQGDLIA- 362
           FE        LY M +N    K+++              Q       D   +P G  +A 
Sbjct: 274 FERQIS----LYTMNANEGKAKKLTIQATNDYRFDQVTHQTYRNGVADYKVAPNGKYVAV 329

Query: 363 ----------------------------------------FTKFSGEKFAIGVMK----- 377
                                                   F      +  + +++     
Sbjct: 330 EIRGEIFIKPIAKDKRKAMNLSDHAFRDESPEWLNDSTLVFISDRNGQRDLYLVRSIDKK 389

Query: 378 -------KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR--NE 428
                        +L    +   APT SP+G+ + +   + G     + SI   G+  NE
Sbjct: 390 QSNLYKTLKTKVIQLTQTKAEEFAPTLSPNGKKIAY---RRGRGELVVASISATGKLSNE 446

Query: 429 TLI----NTPAYASDPQWVG 444
            ++     TP       W  
Sbjct: 447 KVLVKGWATPGGV---AWSP 463



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 56/190 (29%), Gaps = 45/190 (23%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + ++Y+  +      VY+      +    +           +S +G +      
Sbjct: 460 AWSPDSRWLSYSLTNLNFNREVYIQAANNSQPGVNVSMHPRGDYGAVWSPDGSKLAFMSN 519

Query: 278 KDEAMDIYSVDL-------------QSN---------------------------ATERL 297
           +    D++ V L             +                                R+
Sbjct: 520 RINDYDVWFVWLNRADWEKSKSDHEEGGYYDDPDKKKSKPKKNALVNIDFENIHHRVARV 579

Query: 298 TNTLFINISASYSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           T+        +         F +     R  +  LY ++ +GS  K +++  + +    +
Sbjct: 580 TSLPGNEGGLAIGNKGQTFYFTATNPTARHHRYDLYQVKWDGSQTKMLTKRGK-NPRRLL 638

Query: 354 WSPQGDLIAF 363
            SP+G  + F
Sbjct: 639 LSPKGKKLHF 648



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 7/58 (12%)

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWV 443
            +      P  SP G  + FS          ++ +  NG     +     Y ++P W 
Sbjct: 22  TQPIFATQPAISPDGNQVAFS------FQGDIWVMAANGGVARRLTIHQGYDANPIWS 73


>gi|309356046|emb|CAP37634.2| CBR-TAG-10 protein [Caenorhabditis briggsae AF16]
          Length = 451

 Score =  120 bits (302), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 93/223 (41%), Gaps = 31/223 (13%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            T+D  D   ++ +D R     +R+ N          S +G +   +  +   +++Y ++
Sbjct: 181 YTWDIFDDYDIFKVD-RYGNFVQRLTNSPGYDAEGVVSPDGTKIAFTSIRSGDLELYVMN 239

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--------------------QL 328
              +   R+TNTL  +  + ++PD  +++F + R   +                    +L
Sbjct: 240 TDGSNLTRVTNTLGYDGGSFFTPDGKRLIFRASRPKTDEEIAKYKKLLSYNLVEPIAMEL 299

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQ 382
           +++  +G + K+I++  EA++   + +     I F+            F++ ++  DG+ 
Sbjct: 300 FIVDIDGKNMKQITKLGEANWAPYMLN-DNKRIVFSSNYDAAANGFGAFSLYMVNVDGTG 358

Query: 383 -ERLLVEDSNLQAPTW-SPSGRSLIFSRKKDG-DTGSKLYSID 422
            ER+   ++   +    S  G+ L++   ++G      L+  D
Sbjct: 359 LERITYGENQFNSFAMQSYDGKKLVWGSSRNGTQYELNLFIAD 401



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 26/184 (14%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +    +  DI+ VD   N  +RLTN+   +     SPD ++I F S R G  +LYVM +
Sbjct: 181 YTWDIFDDYDIFKVDRYGNFVQRLTNSPGYDAEGVVSPDGTKIAFTSIRSGDLELYVMNT 240

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--------------------FAI 373
           +GS+  R++ +         ++P G  + F     +                       +
Sbjct: 241 DGSNLTRVT-NTLGYDGGSFFTPDGKRLIFRASRPKTDEEIAKYKKLLSYNLVEPIAMEL 299

Query: 374 GVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNE 428
            ++  DG   + + +      AP      + ++FS   D    G     LY ++++G   
Sbjct: 300 FIVDIDGKNMKQITKLGEANWAPYMLNDNKRIVFSSNYDAAANGFGAFSLYMVNVDGTGL 359

Query: 429 TLIN 432
             I 
Sbjct: 360 ERIT 363



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 83/217 (38%), Gaps = 30/217 (13%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              +  +DR G N      +      E   SP+  K+A+ +    D L +Y+M+T     
Sbjct: 188 DYDIFKVDRYG-NFVQRLTNSPGYDAEGVVSPDGTKIAFTSIRSGD-LELYVMNTD-GSN 244

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAM--------------------DIYSVDL 289
             R+ N         F+ +GKR +    + +                      +++ VD+
Sbjct: 245 LTRVTNTLGYDGGSFFTPDGKRLIFRASRPKTDEEIAKYKKLLSYNLVEPIAMELFIVDI 304

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQ 343
                +++T     N +     D+ +IVF S+ +      G   LY++  +G+  +RI+ 
Sbjct: 305 DGKNMKQITKLGEANWAPYMLNDNKRIVFSSNYDAAANGFGAFSLYMVNVDGTGLERITY 364

Query: 344 DKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKD 379
            +       + S  G  + + +  +G ++ + +   D
Sbjct: 365 GENQFNSFAMQSYDGKKLVWGSSRNGTQYELNLFIAD 401



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/293 (17%), Positives = 94/293 (32%), Gaps = 63/293 (21%)

Query: 195 VMDRDG----ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRID-- 247
           V+  DG    AN++ LT           FS +  K+         D  ++Y +D   D  
Sbjct: 54  VVHFDGETHLANVKQLTFGGMNAEGY--FSFDNSKLTLQATGYGTDCDQIYELDLNTDPK 111

Query: 248 -RAPKRIGNFRSMILAPRF--SSNGKRALISVQKDEAMDIYSVDLQ------------SN 292
            +  KRI           F   ++    L +          + D+             ++
Sbjct: 112 LQTLKRISTGLGGTTCSYFYKEADNNHRLYAGNWWNVKIDNTTDVSKTCPEKKCANPKTD 171

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             ++L NT                 +  D      ++ +   G+  +R++ +      + 
Sbjct: 172 ELKQLCNTS----------------YTWDIFDDYDIFKVDRYGNFVQRLT-NSPGYDAEG 214

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
           V SP G  IAFT        + VM  DGS    +           ++P G+ LIF   + 
Sbjct: 215 VVSPDGTKIAFTSIRSGDLELYVMNTDGSNLTRVTNTLGYDGGSFFTPDGKRLIFRASRP 274

Query: 412 G------------------DTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                                  +L+ +D++G+N   I     A+   W  +M
Sbjct: 275 KTDEEIAKYKKLLSYNLVEPIAMELFIVDIDGKNMKQITKLGEAN---WAPYM 324


>gi|197105967|ref|YP_002131344.1| peptidase S9, prolyl oligopeptidase active site region
           [Phenylobacterium zucineum HLK1]
 gi|196479387|gb|ACG78915.1| peptidase S9, prolyl oligopeptidase active site region
           [Phenylobacterium zucineum HLK1]
          Length = 682

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 58/301 (19%), Positives = 105/301 (34%), Gaps = 62/301 (20%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           +   + S+ + D   GA    +    D   F PR+SP+  ++AY +    +  ++Y+   
Sbjct: 68  TDRSQRSIWLADLSTGAQAPLVVD--DGNNFAPRWSPDGTRLAYVSAQPGERPQLYVRWV 125

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISV---------------------------- 276
              R+ K     ++      +S +G+    ++                            
Sbjct: 126 ASGRSAKVATLEQAPNDI-AWSPDGRTLAFTMIELDEGKPLGAPLKKPDGAKWAEPLKVI 184

Query: 277 ------------QKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
                        K     ++ V        ++T   F +    +++ D   ++F S+R 
Sbjct: 185 DRVTYRFDGQGYMKPGFRQVFVVSADGGQPRQVTFGKFDSEGPIAFTADGRGVLFASNRN 244

Query: 324 GK-------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----KFSGEKF 371
                     ++Y +        R++  +      PV SP G  IAF        S E  
Sbjct: 245 PTWEREPQESEVYRVDIVDGRLTRLTS-RVGPDAAPVPSPDGRRIAFVGNDDKGRSHEDS 303

Query: 372 AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + VM  DG   R L    D ++  P WS   RSL F     G   +K+  + L+GR ET
Sbjct: 304 KLYVMDADGGNVRQLAANLDRSVGVPQWSEDSRSLYFDYVDKG--VTKVARVSLDGRLET 361

Query: 430 L 430
           +
Sbjct: 362 V 362



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 56/289 (19%), Positives = 92/289 (31%), Gaps = 60/289 (20%)

Query: 214 LFEPRFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             +P+  P+   VAY         D     ++L D         + +      APR+S +
Sbjct: 45  ASDPQVRPDGGAVAYVRARNDIMTDRSQRSIWLADLSTGAQAPLVVD-DGNNFAPRWSPD 103

Query: 269 GKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES------- 320
           G R    S Q  E   +Y   + S  + ++          ++SPD   + F         
Sbjct: 104 GTRLAYVSAQPGERPQLYVRWVASGRSAKVATLEQAPNDIAWSPDGRTLAFTMIELDEGK 163

Query: 321 ---------------------DR------------EGKEQLYVMQSNGSDQKRISQDKEA 347
                                DR             G  Q++V+ ++G   ++++  K  
Sbjct: 164 PLGAPLKKPDGAKWAEPLKVIDRVTYRFDGQGYMKPGFRQVFVVSADGGQPRQVTFGKFD 223

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKF-------AIGVMK-KDGSQERLLVEDSNLQAPTWSP 399
           S     ++  G  + F       +        +  +   DG   RL        AP  SP
Sbjct: 224 SEGPIAFTADGRGVLFASNRNPTWEREPQESEVYRVDIVDGRLTRLTSRVGPDAAPVPSP 283

Query: 400 SGRSLIFSRKKDGDTG---SKLYSIDLNGRNETLI--NTPAYASDPQWV 443
            GR + F    D       SKLY +D +G N   +  N       PQW 
Sbjct: 284 DGRRIAFVGNDDKGRSHEDSKLYVMDADGGNVRQLAANLDRSVGVPQWS 332



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 93/272 (34%), Gaps = 58/272 (21%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD-- 232
           +R+ +VS             V     A +  L  + + I     +SP+ + +A+   +  
Sbjct: 105 TRLAYVSAQPGERPQLYVRWVASGRSAKVATLEQAPNDI----AWSPDGRTLAFTMIELD 160

Query: 233 ------------------------------------DEDILRVYLMDTRIDRAPKRIGNF 256
                                                +   R   + +     P+++   
Sbjct: 161 EGKPLGAPLKKPDGAKWAEPLKVIDRVTYRFDGQGYMKPGFRQVFVVSADGGQPRQVTFG 220

Query: 257 RSMILAP-RFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISAS 308
           +     P  F+++G+  L +  ++   +       +Y VD+      RLT+ +  + +  
Sbjct: 221 KFDSEGPIAFTADGRGVLFASNRNPTWEREPQESEVYRVDIVDGRLTRLTSRVGPDAAPV 280

Query: 309 YSPDSSQIVFE-SDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            SPD  +I F  +D +G+      LYVM ++G + ++++ + + S   P WS     + F
Sbjct: 281 PSPDGRRIAFVGNDDKGRSHEDSKLYVMDADGGNVRQLAANLDRSVGVPQWSEDSRSLYF 340

Query: 364 TKFSGEKFAIGVMKKDGSQERL---LVEDSNL 392
                    +  +  DG  E +   L      
Sbjct: 341 DYVDKGVTKVARVSLDGRLETVAEGLTGGGLD 372



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 9/103 (8%)

Query: 350 FDPVWSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGR 402
            DP   P G  +A+ +   +      + +I +     G+Q  L+V+D N  AP WSP G 
Sbjct: 46  SDPQVRPDGGAVAYVRARNDIMTDRSQRSIWLADLSTGAQAPLVVDDGNNFAPRWSPDGT 105

Query: 403 SLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
            L +   + G+   +LY   + +GR+  +       +D  W  
Sbjct: 106 RLAYVSAQPGER-PQLYVRWVASGRSAKVATLEQAPNDIAWSP 147



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 48/129 (37%), Gaps = 7/129 (5%)

Query: 176 RILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           RI FV ++        + L VMD DG N+R L  + D+ +  P++S + + + Y  Y D+
Sbjct: 287 RIAFVGNDDKGRSHEDSKLYVMDADGGNVRQLAANLDRSVGVPQWSEDSRSL-YFDYVDK 345

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDEAMDIYSVDLQ 290
            + +V  +           G     +  P     FS        +     A     V  +
Sbjct: 346 GVTKVARVSLDGRLETVAEGLTGGGLDRPYAGGEFSVARGVIAYTAGSTVAPADLVV-RR 404

Query: 291 SNATERLTN 299
                RLT 
Sbjct: 405 GGKASRLTR 413


>gi|83815698|ref|YP_446500.1| acylaminoacyl-peptidase [Salinibacter ruber DSM 13855]
 gi|83757092|gb|ABC45205.1| acylaminoacyl-peptidase [Salinibacter ruber DSM 13855]
          Length = 703

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 103/278 (37%), Gaps = 58/278 (20%)

Query: 212 QILFEPRFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           + +  P+ SP+  ++ Y        +D     ++ +D       K + +  +   +PR+S
Sbjct: 61  EWVTNPQVSPDGSQIVYQRRGMDVMEDRRTSALWRLDADGTDHTK-LTSRTADESSPRWS 119

Query: 267 SNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------ 319
            +G +   +   +E   +IY   ++ N T R+T         S+SPD + + F       
Sbjct: 120 PDGSKIAFTSSDEEHGTEIYVHWVEQNKTARITQLENAPSGLSWSPDGTHLAFSMHVSAP 179

Query: 320 -----------------------------SDREG-----KEQLYVMQSNGSDQKRISQDK 345
                                        SD  G      + L+V++++G   ++++   
Sbjct: 180 EPTLASRPEPPEGADWAEPPRVETRLNHESDGTGVLDYGHDHLFVVRADGGRARQVTAGD 239

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF-------AIGVMKKDGSQERLLVEDSNLQA-PTW 397
                 PVW+P G+ + ++    + +        +  +  DG +   L +       P  
Sbjct: 240 YNHSSRPVWTPDGEALLYSANRHDNWERERRNSELYRVPVDGGESTPLTDRFGPDHTPRV 299

Query: 398 SPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLIN 432
           SP G ++ +    D     +   LY +D +G N  +++
Sbjct: 300 SPDGETIAYLGYDDEVQTYQVTRLYVMDRDGSNRRVVD 337



 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 88/249 (35%), Gaps = 62/249 (24%)

Query: 259 MILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +  P+ S +G + +        ++      ++ +D       +LT+      S  +SPD
Sbjct: 62  WVTNPQVSPDGSQIVYQRRGMDVMEDRRTSALWRLDADGTDHTKLTSRTADESSPRWSPD 121

Query: 313 SSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            S+I F  SD E   ++YV     +   RI+Q + A      WSP G  +AF+       
Sbjct: 122 GSKIAFTSSDEEHGTEIYVHWVEQNKTARITQLENAP-SGLSWSPDGTHLAFSMHVSAPE 180

Query: 367 -----------------------------------SGEKFAIGVMKKDGSQERLLVEDSN 391
                                                    + V++ DG + R +     
Sbjct: 181 PTLASRPEPPEGADWAEPPRVETRLNHESDGTGVLDYGHDHLFVVRADGGRARQVTAGDY 240

Query: 392 LQA--PTWSPSGRSLIFSRKKDG-----DTGSKLYSIDLNGRNETLIN-------TPAYA 437
             +  P W+P G +L++S  +          S+LY + ++G   T +        TP  +
Sbjct: 241 NHSSRPVWTPDGEALLYSANRHDNWERERRNSELYRVPVDGGESTPLTDRFGPDHTPRVS 300

Query: 438 SDPQWVGFM 446
            D + + ++
Sbjct: 301 PDGETIAYL 309



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 81/268 (30%), Gaps = 55/268 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S+I F S     G       V     A I  L  +   +     +SP+   +A++ +   
Sbjct: 123 SKIAFTSSDEEHGTEIYVHWVEQNKTARITQLENAPSGL----SWSPDGTHLAFSMHVSA 178

Query: 235 DIL---------------------------------------RVYLMDTRIDRAPKRIGN 255
                                                      ++++     RA +    
Sbjct: 179 PEPTLASRPEPPEGADWAEPPRVETRLNHESDGTGVLDYGHDHLFVVRADGGRARQVTAG 238

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISAS 308
             +    P ++ +G+  L S  + +  +       +Y V +    +  LT+    + +  
Sbjct: 239 DYNHSSRPVWTPDGEALLYSANRHDNWERERRNSELYRVPVDGGESTPLTDRFGPDHTPR 298

Query: 309 YSPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            SPD   I +    +  +     +LYVM  +GS+++ +      S  D  W   G+ +  
Sbjct: 299 VSPDGETIAYLGYDDEVQTYQVTRLYVMDRDGSNRRVVDLGLNRSIDDIAWDEDGEGLYV 358

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                    +G    DGS   +      
Sbjct: 359 QYEDEGTTKLGHTTLDGSTSVVATNLGG 386



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 58/182 (31%), Gaps = 13/182 (7%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-----YDDEDIL 237
           + V     + L V+  DG   R +T         P ++P+ + + Y+      ++ E   
Sbjct: 212 TGVLDYGHDHLFVVRADGGRARQVTAGDYNHSSRPVWTPDGEALLYSANRHDNWERERRN 271

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEAMDIYSVDLQSN 292
                          + +       PR S +G+          VQ  +   +Y +D   +
Sbjct: 272 SELYRVPVDGGESTPLTDRFGPDHTPRVSPDGETIAYLGYDDEVQTYQVTRLYVMDRDGS 331

Query: 293 ATER--LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 L     I+  A +  D   +  + + EG  +L     +GS     +     S  
Sbjct: 332 NRRVVDLGLNRSIDDIA-WDEDGEGLYVQYEDEGTTKLGHTTLDGSTSVVATNLGGTSIG 390

Query: 351 DP 352
            P
Sbjct: 391 RP 392


>gi|254294964|ref|YP_003060987.1| hypothetical protein Hbal_2615 [Hirschia baltica ATCC 49814]
 gi|254043495|gb|ACT60290.1| WD40 domain protein beta Propeller [Hirschia baltica ATCC 49814]
          Length = 648

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/327 (16%), Positives = 110/327 (33%), Gaps = 52/327 (15%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY-------LTPSRDQILFEPRF--- 219
           KG  N  I +   S           +  +DG+ + Y            D   ++P +   
Sbjct: 322 KGPENEGIYYTDGSTPILKKNVREPIWTQDGSQVIYEQVDHTRRPDGVDLYSWDPEWEYK 381

Query: 220 ---------SPNQ---------QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
                    S ++           +     D ++   +Y +     + P  +G       
Sbjct: 382 HIDVFPLLSSQDEIVISDKKNIGNLVVLDRDGKNPRTIYEVTKESTKTPYLLGTGLVGAY 441

Query: 262 APRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            P +S +G+     V      + D    +  V         +T+        S+S D  +
Sbjct: 442 QPSWSRDGEWVTFCVGTFFYKRYDAPARVMMVRRDGTGLREVTHGEENAGFPSFSADGKE 501

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIG 374
           IV+    +    L +      + + +++  +     P +SP G  I FT+  G   + + 
Sbjct: 502 IVYRVWDKENIGLRIYNIEKDEHRVLTETGD---NLPAYSPDGTRILFTRRHGHADYDLY 558

Query: 375 VMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG------------DTGSKLYSI 421
            +K DG+   RL    S      WS  G  +++S    G                +++ +
Sbjct: 559 TIKPDGTDLVRLTTHPSGDGHAVWSNDGSKIMWSGSVYGFRDEAALYDDTFQQYGQIWVM 618

Query: 422 DLNGRNETLINTPAY-ASDPQWVGFMD 447
           + +G N+ ++    +  S P +V ++D
Sbjct: 619 NADGSNKHMVTDSKWEDSMPLYVPYLD 645



 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 95/263 (36%), Gaps = 35/263 (13%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +     S T E       ++F++         + L + + DG N R L        +   
Sbjct: 35  APQAIASSTTEDVVEKKGVMFMNRIGPG---SSELYISNADGTNERKLLGENTVFEYSAE 91

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            + +   V + +  + D               + + +  S+  A   S +GK+      +
Sbjct: 92  LASDGTSVYFTSERNGDGNSELFKANIDGSNIEEVVSSSSVEDAVSISPDGKKIAFVSTR 151

Query: 279 DEAM-DIYSVDLQSNATERLTNTLFINIS---------ASYSPDSSQIVFESDREGKEQ- 327
           +    +++  DL++     LT    I             S+SPD   I F SDR    + 
Sbjct: 152 EGYFSNVWIKDLETGELTNLTGAEHIQGDPMLPNSFLRPSWSPDGKWIAFSSDRNTNWRG 211

Query: 328 --------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                         +YV+ ++G + +R+    E SY  P WSP G  I+F       +AI
Sbjct: 212 HDYPIGWEHTQELSIYVIGADGQNFRRLVSKPEMSYGSPSWSPDGKRISF-------YAI 264

Query: 374 GVMKKDGSQERLLVEDSNLQAPT 396
                 G++   LV+D+  Q  +
Sbjct: 265 TTEDTWGARRYNLVQDTTSQIAS 287



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 95/244 (38%), Gaps = 41/244 (16%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEA 281
           + V +          +Y+ +       K +G       +   +S+G     + ++  D  
Sbjct: 51  KGVMFMNRIGPGSSELYISNADGTNERKLLGENTVFEYSAELASDGTSVYFTSERNGDGN 110

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKR 340
            +++  ++  +  E + ++  +  + S SPD  +I F S REG    +++      +   
Sbjct: 111 SELFKANIDGSNIEEVVSSSSVEDAVSISPDGKKIAFVSTREGYFSNVWIKDLETGELTN 170

Query: 341 ISQDK--------EASYFDPVWSPQGDLIAFTKFSGEKFA---------------IGVMK 377
           ++  +          S+  P WSP G  IAF+      +                I V+ 
Sbjct: 171 LTGAEHIQGDPMLPNSFLRPSWSPDGKWIAFSSDRNTNWRGHDYPIGWEHTQELSIYVIG 230

Query: 378 KDGSQERLLVEDSNLQ--APTWSPSGRSLIF----------SRKKD--GDTGSKLYSIDL 423
            DG   R LV    +   +P+WSP G+ + F          +R+ +   DT S++ S+D+
Sbjct: 231 ADGQNFRRLVSKPEMSYGSPSWSPDGKRISFYAITTEDTWGARRYNLVQDTTSQIASVDV 290

Query: 424 -NGR 426
             GR
Sbjct: 291 ETGR 294



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 76/206 (36%), Gaps = 32/206 (15%)

Query: 270 KRALISVQK--DEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDR--EG 324
           K+ ++ + +    + ++Y  +       +L         SA  + D + + F S+R  +G
Sbjct: 50  KKGVMFMNRIGPGSSELYISNADGTNERKLLGENTVFEYSAELASDGTSVYFTSERNGDG 109

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQE 383
             +L+    +GS+ + +             SP G  IAF       F  + +   +  + 
Sbjct: 110 NSELFKANIDGSNIEEVVSSSSVED-AVSISPDGKKIAFVSTREGYFSNVWIKDLETGEL 168

Query: 384 RLLVEDSNLQA----------PTWSPSGRSLIFSRKKDGDTGS-------------KLYS 420
             L    ++Q           P+WSP G+ + FS  ++ +                 +Y 
Sbjct: 169 TNLTGAEHIQGDPMLPNSFLRPSWSPDGKWIAFSSDRNTNWRGHDYPIGWEHTQELSIYV 228

Query: 421 IDLNGRN-ETLINTPAYA-SDPQWVG 444
           I  +G+N   L++ P  +   P W  
Sbjct: 229 IGADGQNFRRLVSKPEMSYGSPSWSP 254



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 58/141 (41%), Gaps = 20/141 (14%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGS 381
           G  +LY+  ++G++++++  +     +    +  G  + FT  +       +     DGS
Sbjct: 62  GSSELYISNADGTNERKLLGENTVFEYSAELASDGTSVYFTSERNGDGNSELFKANIDGS 121

Query: 382 QERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT------- 433
               +V  S++  A + SP G+ + F   ++G   S ++  DL     T +         
Sbjct: 122 NIEEVVSSSSVEDAVSISPDGKKIAFVSTREGYF-SNVWIKDLETGELTNLTGAEHIQGD 180

Query: 434 ---------PAYASDPQWVGF 445
                    P+++ D +W+ F
Sbjct: 181 PMLPNSFLRPSWSPDGKWIAF 201


>gi|78049130|ref|YP_365305.1| putative regulatory protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78037560|emb|CAJ25305.1| putative regulatory protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 821

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 13/232 (5%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               +  +       P  SP+  +VAYA+   +      L+ T  +  P+ +      + 
Sbjct: 258 RPYQVITAGGGFDLTPSLSPDGARVAYASLTSDRTGTSILVKTTDNAYPRVLETPAPGVS 317

Query: 262 A--PRFSSNGKRALISVQK-DEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQI 316
              P +S +G++   S Q  D +  +        A  R  +       +S S+SPD   +
Sbjct: 318 DRLPAWSPDGRQIAFSRQAPDGSCRVMIAAATGPAASREVMRCDGADMLSFSWSPDGRAL 377

Query: 317 VFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFA 372
           VF S     G  ++  +       + +    +A  FD  P +SP G+ I F + + +   
Sbjct: 378 VFGSMTGKHGAARMRRLDLATGQWQTLDYPAQAGDFDYAPRYSPDGNWIVFLR-NPQLGD 436

Query: 373 IGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +  +  +G   ERL  ++++++  +W P G  LIF R+ D +  ++LY +DL
Sbjct: 437 LWRIPAEGGVAERLTHDNADIRGWSWLPDGSGLIFGRRVDSE--ARLYRLDL 486



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 58/323 (17%), Positives = 107/323 (33%), Gaps = 60/323 (18%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDE 234
           R+ + S +  S     S+ V   D A  R L TP+       P +SP+ +++A++    +
Sbjct: 281 RVAYASLT--SDRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGRQIAFSRQAPD 338

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQ--KDEAMDIYSVDLQS 291
              RV +       A + +       + +  +S +G+  +      K  A  +  +DL +
Sbjct: 339 GSCRVMIAAATGPAASREVMRCDGADMLSFSWSPDGRALVFGSMTGKHGAARMRRLDLAT 398

Query: 292 NATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
              + L         + +  YSPD + IVF  + +    L+ + + G   +R++ D  A 
Sbjct: 399 GQWQTLDYPAQAGDFDYAPRYSPDGNWIVFLRNPQ-LGDLWRIPAEGGVAERLTHD-NAD 456

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKK------------------------------ 378
                W P G  + F +    +  +  +                                
Sbjct: 457 IRGWSWLPDGSGLIFGRRVDSEARLYRLDLRDHSLHDVGVDDAQAPDVAHGHLVFVQRKP 516

Query: 379 ------------DGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                       +G   + RL         P  +P GR LIF+  + G        +   
Sbjct: 517 QFGVYQVIGDTMNGGYIRRRLFPSSGRDDQPMIAPDGRQLIFASNRSGAYALWWGDVRKP 576

Query: 425 GR---NETLINTPAYASDPQWVG 444
           G     E L      A+D  W  
Sbjct: 577 GSVRLIEGLRPDSRQAAD--WSA 597



 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 78/234 (33%), Gaps = 19/234 (8%)

Query: 227 AYATYDDEDIL---RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAM 282
            + ++         + + +     R  + I       L P  S +G R    S+  D   
Sbjct: 234 VWTSWRPAPAPETAQAHAVLGSPKRPYQVITAGGGFDLTPSLSPDGARVAYASLTSDRTG 293

Query: 283 DIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQ 338
               V    NA  R+  T    +S    ++SPD  QI F     +G  ++ +  + G   
Sbjct: 294 TSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGRQIAFSRQAPDGSCRVMIAAATGPAA 353

Query: 339 KR-ISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLL----VEDSN 391
            R + +   A      WSP G  + F   +G      +  +     Q + L         
Sbjct: 354 SREVMRCDGADMLSFSWSPDGRALVFGSMTGKHGAARMRRLDLATGQWQTLDYPAQAGDF 413

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
             AP +SP G  ++F R         L+ I   G   E L +  A      W+ 
Sbjct: 414 DYAPRYSPDGNWIVFLRN---PQLGDLWRIPAEGGVAERLTHDNADIRGWSWLP 464



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 21/176 (11%)

Query: 292 NATER----LTNTLFINISASYSPDSSQIVF---ESDREGKEQLYVMQSNGSDQKRISQD 344
            + +R    +T     +++ S SPD +++ +    SDR G   L     N   +   +  
Sbjct: 254 GSPKRPYQVITAGGGFDLTPSLSPDGARVAYASLTSDRTGTSILVKTTDNAYPRVLETPA 313

Query: 345 KEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPS 400
              S   P WSP G  IAF++ +      + +    G   S+E +  + +++ + +WSP 
Sbjct: 314 PGVSDRLPAWSPDGRQIAFSRQAPDGSCRVMIAAATGPAASREVMRCDGADMLSFSWSPD 373

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL-NGRNETL---------INTPAYASDPQWVGFM 446
           GR+L+F         +++  +DL  G+ +TL            P Y+ D  W+ F+
Sbjct: 374 GRALVFGSMTGKHGAARMRRLDLATGQWQTLDYPAQAGDFDYAPRYSPDGNWIVFL 429



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 82/292 (28%), Gaps = 52/292 (17%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-ED 235
           ++F S +   G  +     +                  + PR+SP+   + +       D
Sbjct: 377 LVFGSMTGKHGAARMRRLDLATGQWQTLDYPAQAGDFDYAPRYSPDGNWIVFLRNPQLGD 436

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ----- 290
           + R+           +R+ +  + I    +  +G   +   + D    +Y +DL+     
Sbjct: 437 LWRI----PAEGGVAERLTHDNADIRGWSWLPDGSGLIFGRRVDSEARLYRLDLRDHSLH 492

Query: 291 --------------------------------------SNATERLTNTLFINISASYSPD 312
                                                      RL  +   +     +PD
Sbjct: 493 DVGVDDAQAPDVAHGHLVFVQRKPQFGVYQVIGDTMNGGYIRRRLFPSSGRDDQPMIAPD 552

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKF 371
             Q++F S+R G   L+          R+ +  +  S     WS     +  +       
Sbjct: 553 GRQLIFASNRSGAYALWWGDVRKPGSVRLIEGLRPDSRQAADWSADSQRVLVSGSDAAGH 612

Query: 372 A--IGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
           A    V    G   RL V           P   R L+ +   DG T + LY 
Sbjct: 613 AALFEVTPSSGQVVRLPVPQPRPLQAIHLPDPDRLLVLAAADDGHTFATLYD 664


>gi|268532750|ref|XP_002631503.1| C. briggsae CBR-TAG-10 protein [Caenorhabditis briggsae]
          Length = 424

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 93/223 (41%), Gaps = 31/223 (13%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            T+D  D   ++ +D R     +R+ N          S +G +   +  +   +++Y ++
Sbjct: 182 YTWDIFDDYDIFKVD-RYGNFVQRLTNSPGYDAEGVVSPDGTKIAFTSIRSGDLELYVMN 240

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--------------------QL 328
              +   R+TNTL  +  + ++PD  +++F + R   +                    +L
Sbjct: 241 TDGSNLTRVTNTLGYDGGSFFTPDGKRLIFRASRPKTDEEIAKYKKLLSYNLVEPIAMEL 300

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQ 382
           +++  +G + K+I++  EA++   + +     I F+            F++ ++  DG+ 
Sbjct: 301 FIVDIDGKNMKQITKLGEANWAPYMLN-DNKRIVFSSNYDAAANGFGAFSLYMVNVDGTG 359

Query: 383 -ERLLVEDSNLQAPTW-SPSGRSLIFSRKKDG-DTGSKLYSID 422
            ER+   ++   +    S  G+ L++   ++G      L+  D
Sbjct: 360 LERITYGENQFNSFAMQSYDGKKLVWGSSRNGTQYELNLFIAD 402



 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 26/184 (14%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +    +  DI+ VD   N  +RLTN+   +     SPD ++I F S R G  +LYVM +
Sbjct: 182 YTWDIFDDYDIFKVDRYGNFVQRLTNSPGYDAEGVVSPDGTKIAFTSIRSGDLELYVMNT 241

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--------------------FAI 373
           +GS+  R++ +         ++P G  + F     +                       +
Sbjct: 242 DGSNLTRVT-NTLGYDGGSFFTPDGKRLIFRASRPKTDEEIAKYKKLLSYNLVEPIAMEL 300

Query: 374 GVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNE 428
            ++  DG   + + +      AP      + ++FS   D    G     LY ++++G   
Sbjct: 301 FIVDIDGKNMKQITKLGEANWAPYMLNDNKRIVFSSNYDAAANGFGAFSLYMVNVDGTGL 360

Query: 429 TLIN 432
             I 
Sbjct: 361 ERIT 364



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 83/217 (38%), Gaps = 30/217 (13%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              +  +DR G N      +      E   SP+  K+A+ +    D L +Y+M+T     
Sbjct: 189 DYDIFKVDRYG-NFVQRLTNSPGYDAEGVVSPDGTKIAFTSIRSGD-LELYVMNTD-GSN 245

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAM--------------------DIYSVDL 289
             R+ N         F+ +GKR +    + +                      +++ VD+
Sbjct: 246 LTRVTNTLGYDGGSFFTPDGKRLIFRASRPKTDEEIAKYKKLLSYNLVEPIAMELFIVDI 305

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQ 343
                +++T     N +     D+ +IVF S+ +      G   LY++  +G+  +RI+ 
Sbjct: 306 DGKNMKQITKLGEANWAPYMLNDNKRIVFSSNYDAAANGFGAFSLYMVNVDGTGLERITY 365

Query: 344 DKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKD 379
            +       + S  G  + + +  +G ++ + +   D
Sbjct: 366 GENQFNSFAMQSYDGKKLVWGSSRNGTQYELNLFIAD 402



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/293 (17%), Positives = 94/293 (32%), Gaps = 63/293 (21%)

Query: 195 VMDRDG----ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRID-- 247
           V+  DG    AN++ LT           FS +  K+         D  ++Y +D   D  
Sbjct: 55  VVHFDGETHLANVKQLTFGGMNAEGY--FSFDNSKLTLQATGYGTDCDQIYELDLNTDPK 112

Query: 248 -RAPKRIGNFRSMILAPRF--SSNGKRALISVQKDEAMDIYSVDLQ------------SN 292
            +  KRI           F   ++    L +          + D+             ++
Sbjct: 113 LQTLKRISTGLGGTTCSYFYKEADNNHRLYAGNWWNVKIDNTTDVSKTCPEKKCANPKTD 172

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             ++L NT                 +  D      ++ +   G+  +R++ +      + 
Sbjct: 173 ELKQLCNTS----------------YTWDIFDDYDIFKVDRYGNFVQRLT-NSPGYDAEG 215

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
           V SP G  IAFT        + VM  DGS    +           ++P G+ LIF   + 
Sbjct: 216 VVSPDGTKIAFTSIRSGDLELYVMNTDGSNLTRVTNTLGYDGGSFFTPDGKRLIFRASRP 275

Query: 412 G------------------DTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                                  +L+ +D++G+N   I     A+   W  +M
Sbjct: 276 KTDEEIAKYKKLLSYNLVEPIAMELFIVDIDGKNMKQITKLGEAN---WAPYM 325


>gi|325926634|ref|ZP_08187948.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas perforans 91-118]
 gi|325542986|gb|EGD14435.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas perforans 91-118]
          Length = 779

 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 13/232 (5%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               +  +       P  SP+  +VAYA+   +      L+ T  +  P+ +      + 
Sbjct: 216 RPYQVITAGGGFDLTPSLSPDGARVAYASLTRDRTGTSILVKTTDNAYPRVLETPAPGVS 275

Query: 262 A--PRFSSNGKRALISVQK-DEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQI 316
              P +S +G++   S Q  D +  +        A  R  +       +S S+SPD   +
Sbjct: 276 DRLPAWSPDGRQIAFSRQAPDGSCRVMIAAATGPAASREVMRCDGADMLSFSWSPDGRAL 335

Query: 317 VFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFA 372
           VF S     G  ++  +       + +    +A  FD  P +SP G+ I F + + +   
Sbjct: 336 VFGSMTGTHGAARMRRLDLATGQWQTLDYPAQAGDFDYAPRYSPDGNWIVFLR-NPQLGD 394

Query: 373 IGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +  +  +G   ERL  ++++++  +W P G  LIF R+ D +  ++LY +DL
Sbjct: 395 LWRIPAEGGVAERLTHDNADIRGWSWLPDGSGLIFGRRVDSE--ARLYRLDL 444



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 79/234 (33%), Gaps = 19/234 (8%)

Query: 227 AYATYDDEDIL---RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAM 282
            + ++         + + +     R  + I       L P  S +G R    S+ +D   
Sbjct: 192 VWTSWRPAPAPETAQAHAVLGSPKRPYQVITAGGGFDLTPSLSPDGARVAYASLTRDRTG 251

Query: 283 DIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQ 338
               V    NA  R+  T    +S    ++SPD  QI F     +G  ++ +  + G   
Sbjct: 252 TSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGRQIAFSRQAPDGSCRVMIAAATGPAA 311

Query: 339 KR-ISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLL----VEDSN 391
            R + +   A      WSP G  + F   +G      +  +     Q + L         
Sbjct: 312 SREVMRCDGADMLSFSWSPDGRALVFGSMTGTHGAARMRRLDLATGQWQTLDYPAQAGDF 371

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
             AP +SP G  ++F R         L+ I   G   E L +  A      W+ 
Sbjct: 372 DYAPRYSPDGNWIVFLRN---PQLGDLWRIPAEGGVAERLTHDNADIRGWSWLP 422



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 56/323 (17%), Positives = 105/323 (32%), Gaps = 60/323 (18%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDE 234
           R+ + S +        S+ V   D A  R L TP+       P +SP+ +++A++    +
Sbjct: 239 RVAYASLTR--DRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGRQIAFSRQAPD 296

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKD--EAMDIYSVDLQS 291
              RV +       A + +       + +  +S +G+  +         A  +  +DL +
Sbjct: 297 GSCRVMIAAATGPAASREVMRCDGADMLSFSWSPDGRALVFGSMTGTHGAARMRRLDLAT 356

Query: 292 NATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
              + L         + +  YSPD + IVF  + +    L+ + + G   +R++ D  A 
Sbjct: 357 GQWQTLDYPAQAGDFDYAPRYSPDGNWIVFLRNPQ-LGDLWRIPAEGGVAERLTHD-NAD 414

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKK------------------------------ 378
                W P G  + F +    +  +  +                                
Sbjct: 415 IRGWSWLPDGSGLIFGRRVDSEARLYRLDLRDHSLHDVGVDDAQAPDVAHGHLVFVQRKP 474

Query: 379 ------------DGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                       +G   + RL         P  +P GR LIF+  + G        +   
Sbjct: 475 QFGVYQVIGDTMNGGYIRRRLFPSSGRDDQPMIAPDGRQLIFASNRSGAYALWWGDVRKP 534

Query: 425 GR---NETLINTPAYASDPQWVG 444
           G     E L      A+D  W  
Sbjct: 535 GSVRLIEGLRPDSRQAAD--WSA 555



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 21/176 (11%)

Query: 292 NATER----LTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQD 344
            + +R    +T     +++ S SPD +++ + S   DR G   L     N   +   +  
Sbjct: 212 GSPKRPYQVITAGGGFDLTPSLSPDGARVAYASLTRDRTGTSILVKTTDNAYPRVLETPA 271

Query: 345 KEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPS 400
              S   P WSP G  IAF++ +      + +    G   S+E +  + +++ + +WSP 
Sbjct: 272 PGVSDRLPAWSPDGRQIAFSRQAPDGSCRVMIAAATGPAASREVMRCDGADMLSFSWSPD 331

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL-NGRNETL---------INTPAYASDPQWVGFM 446
           GR+L+F         +++  +DL  G+ +TL            P Y+ D  W+ F+
Sbjct: 332 GRALVFGSMTGTHGAARMRRLDLATGQWQTLDYPAQAGDFDYAPRYSPDGNWIVFL 387



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 82/292 (28%), Gaps = 52/292 (17%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-ED 235
           ++F S +   G  +     +                  + PR+SP+   + +       D
Sbjct: 335 LVFGSMTGTHGAARMRRLDLATGQWQTLDYPAQAGDFDYAPRYSPDGNWIVFLRNPQLGD 394

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ----- 290
           + R+           +R+ +  + I    +  +G   +   + D    +Y +DL+     
Sbjct: 395 LWRI----PAEGGVAERLTHDNADIRGWSWLPDGSGLIFGRRVDSEARLYRLDLRDHSLH 450

Query: 291 --------------------------------------SNATERLTNTLFINISASYSPD 312
                                                      RL  +   +     +PD
Sbjct: 451 DVGVDDAQAPDVAHGHLVFVQRKPQFGVYQVIGDTMNGGYIRRRLFPSSGRDDQPMIAPD 510

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKF 371
             Q++F S+R G   L+          R+ +  +  S     WS     +  +       
Sbjct: 511 GRQLIFASNRSGAYALWWGDVRKPGSVRLIEGLRPDSRQAADWSADSQRVLVSGSDAAGH 570

Query: 372 A--IGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
           A    V    G   RL V           P   R L+ +   DG T + LY 
Sbjct: 571 AALFEVTPSSGQVVRLPVPQPRPLQAIHLPDPHRLLVLAAADDGHTFATLYD 622


>gi|162452828|ref|YP_001615195.1| protein kinase [Sorangium cellulosum 'So ce 56']
 gi|161163410|emb|CAN94715.1| Protein kinase [Sorangium cellulosum 'So ce 56']
          Length = 1532

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 51/288 (17%), Positives = 112/288 (38%), Gaps = 29/288 (10%)

Query: 160  DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            D +Y +     G          + VV+     +  V + DG+    +    + +++   F
Sbjct: 1055 DAVYSAAFSPDG----------KRVVTASWDKTARVWNADGSGEPRILRGHEDVVYSAAF 1104

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+ +++  A++D        + +      P+ +   +  + +  FS++G+R + +   D
Sbjct: 1105 SPDGERIVTASWDK----TARVWNADGSGEPRILRGHQDRVYSAVFSADGRRIV-TASYD 1159

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQ 338
            +   +++ +  +     L        SA++SPD  +IV  S DR  +    V  +  +  
Sbjct: 1160 KTARVWNAE-STGEPLSLRGHDDSVSSAAFSPDGKRIVTASWDRTAR----VWNAEVAGA 1214

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPT 396
              I +  E   F   +SP G  I             V   DG+ E L++      +++  
Sbjct: 1215 PVILRGHEGEVFSAAFSPDGKRIVTASDDKTA---RVWNADGTGEPLVIRGHADRVRSAA 1271

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            +SP G  ++ +     D  +++++ D +G   TL           +  
Sbjct: 1272 FSPDGERIVTAS---FDKTARVWNADGSGEPVTLRGHADRVRSAAFSP 1316



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 56/366 (15%), Positives = 127/366 (34%), Gaps = 24/366 (6%)

Query: 80   NLISQDSFKQKITNPDSIPRFQDWNSLGA-QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
            N ++     ++I         + W + GA + LV   +    +      F      D  +
Sbjct: 932  NSVAFSPDGERIVTASDDRTARVWRTAGAGEPLV---LRGHEEGVYSAAFS----PDGGR 984

Query: 139  IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
            I+   F  +   W+  A    + +      E   F +        +V+     +  V   
Sbjct: 985  IVTASFDRTARVWK--ADGTGELVVLRGHAEPVYFAA-FSLDGGRIVTSSFDRTARVWKA 1041

Query: 199  DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            DG     + P  +  ++   FSP+ ++V  A++D        + +      P+ +     
Sbjct: 1042 DGTGEPVVLPGHEDAVYSAAFSPDGKRVVTASWDK----TARVWNADGSGEPRILRGHED 1097

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            ++ +  FS +G+R + +   D+   +++ D  S     L        SA +S D  +IV 
Sbjct: 1098 VVYSAAFSPDGERIV-TASWDKTARVWNAD-GSGEPRILRGHQDRVYSAVFSADGRRIVT 1155

Query: 319  ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             S     +   V  +  + +    +  + S     +SP G  I    +      +   + 
Sbjct: 1156 ASY---DKTARVWNAESTGEPLSLRGHDDSVSSAAFSPDGKRIVTASWD-RTARVWNAEV 1211

Query: 379  DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             G+   L   +  + +  +SP G+ ++ +     D  +++++ D  G    +        
Sbjct: 1212 AGAPVILRGHEGEVFSAAFSPDGKRIVTASD---DKTARVWNADGTGEPLVIRGHADRVR 1268

Query: 439  DPQWVG 444
               +  
Sbjct: 1269 SAAFSP 1274



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 99/263 (37%), Gaps = 13/263 (4%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + +V+     +  V + + A    +    +  +F   FSP+ +++  A+ D        +
Sbjct: 1193 KRIVTASWDRTARVWNAEVAGAPVILRGHEGEVFSAAFSPDGKRIVTASDDK----TARV 1248

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +      P  I      + +  FS +G+R + +   D+   +++ D  S     L    
Sbjct: 1249 WNADGTGEPLVIRGHADRVRSAAFSPDGERIV-TASFDKTARVWNAD-GSGEPVTLRGHA 1306

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                SA++SPD  +IV  S         V  ++G+ +  + +  +       +SP G  +
Sbjct: 1307 DRVRSAAFSPDGERIVTASY---DNTARVWNADGTGEPVVLRGHDRWVVSAAFSPDGKRV 1363

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                +  +   +      G    L   +  + A  +SP G+ ++ +     D  +++++ 
Sbjct: 1364 VTASWD-KTVRVWNADGTGKPVVLRGHEHLVNAAVFSPDGKYVVTASD---DKTTRIWNA 1419

Query: 422  DLNGRNETLINTPAYASDPQWVG 444
            D  G    L  + A  +   +  
Sbjct: 1420 DGTGEPLVLRGSDASVNAVAYSP 1442



 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 93/238 (39%), Gaps = 10/238 (4%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             E   F++      + +V+     +  V + DG     +       +    FSP+ +++ 
Sbjct: 1221 HEGEVFSAAFSPDGKRIVTASDDKTARVWNADGTGEPLVIRGHADRVRSAAFSPDGERIV 1280

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A++D        + +      P  +      + +  FS +G+R + +   D    +++ 
Sbjct: 1281 TASFDK----TARVWNADGSGEPVTLRGHADRVRSAAFSPDGERIV-TASYDNTARVWNA 1335

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            D  +     L       +SA++SPD  ++V  S     + + V  ++G+ +  + +  E 
Sbjct: 1336 D-GTGEPVVLRGHDRWVVSAAFSPDGKRVVTAS---WDKTVRVWNADGTGKPVVLRGHEH 1391

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 V+SP G  +  T    +   I      G    L   D+++ A  +SP G+ ++
Sbjct: 1392 LVNAAVFSPDGKYVV-TASDDKTTRIWNADGTGEPLVLRGSDASVNAVAYSPDGKRIV 1448



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 92/244 (37%), Gaps = 19/244 (7%)

Query: 190  KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              ++ V + DG     +    D  +    FSP+ +++  A+ D        +  T     
Sbjct: 907  DRAVRVWNADGTGEPLVLRGHDAPINSVAFSPDGERIVTASDDR----TARVWRTAGAGE 962

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            P  +      + +  FS +G R + +   D    ++  D  +     L         A++
Sbjct: 963  PLVLRGHEEGVYSAAFSPDGGRIV-TASFDRTARVWKAD-GTGELVVLRGHAEPVYFAAF 1020

Query: 310  SPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S D  +IV  S DR  +    V +++G+ +  +    E + +   +SP G  +    +  
Sbjct: 1021 SLDGGRIVTSSFDRTAR----VWKADGTGEPVVLPGHEDAVYSAAFSPDGKRVVTASWDK 1076

Query: 369  EKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                  V   DGS E  ++        +  +SP G  ++ +     D  +++++ D +G 
Sbjct: 1077 TA---RVWNADGSGEPRILRGHEDVVYSAAFSPDGERIVTASW---DKTARVWNADGSGE 1130

Query: 427  NETL 430
               L
Sbjct: 1131 PRIL 1134



 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 93/244 (38%), Gaps = 21/244 (8%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             +  +    +    FSP+ + +A    D      V + +      P  +    + I +  
Sbjct: 880  RVVLTHPDFVIRAAFSPDGKHIATICADR----AVRVWNADGTGEPLVLRGHDAPINSVA 935

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DRE 323
            FS +G+R + +   D    ++     +     L        SA++SPD  +IV  S DR 
Sbjct: 936  FSPDGERIV-TASDDRTARVWRT-AGAGEPLVLRGHEEGVYSAAFSPDGGRIVTASFDRT 993

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             +    V +++G+ +  + +      +   +S  G  I  + F      +      G   
Sbjct: 994  AR----VWKADGTGELVVLRGHAEPVYFAAFSLDGGRIVTSSFD-RTARVWKADGTGEPV 1048

Query: 384  RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYA 437
             L   +  + +  +SP G+ ++ +     D  +++++ D +G    L      + + A++
Sbjct: 1049 VLPGHEDAVYSAAFSPDGKRVVTASW---DKTARVWNADGSGEPRILRGHEDVVYSAAFS 1105

Query: 438  SDPQ 441
             D +
Sbjct: 1106 PDGE 1109



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 72/196 (36%), Gaps = 13/196 (6%)

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            + +      ++   FS +GK    ++  D A+ +++ D  +     L        S ++S
Sbjct: 880  RVVLTHPDFVIRAAFSPDGKHIA-TICADRAVRVWNAD-GTGEPLVLRGHDAPINSVAFS 937

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            PD  +IV  SD        V ++ G+ +  + +  E   +   +SP G  I    F    
Sbjct: 938  PDGERIVTASD---DRTARVWRTAGAGEPLVLRGHEEGVYSAAFSPDGGRIVTASFDRTA 994

Query: 371  FAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                V K DG+ E +++      +    +S  G  ++ S     D  ++++  D  G   
Sbjct: 995  ---RVWKADGTGELVVLRGHAEPVYFAAFSLDGGRIVTSS---FDRTARVWKADGTGEPV 1048

Query: 429  TLINTPAYASDPQWVG 444
             L           +  
Sbjct: 1049 VLPGHEDAVYSAAFSP 1064



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 6/140 (4%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            E +V+    N+  V + DG     +    D+ +    FSP+ ++V  A++D      V +
Sbjct: 1319 ERIVTASYDNTARVWNADGTGEPVVLRGHDRWVVSAAFSPDGKRVVTASWDK----TVRV 1374

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +      P  +     ++ A  FS +GK  +++   D+   I++ D          +  
Sbjct: 1375 WNADGTGKPVVLRGHEHLVNAAVFSPDGKY-VVTASDDKTTRIWNADGTGEPLVLRGSDA 1433

Query: 302  FINISASYSPDSSQIVFESD 321
             +N  A YSPD  +IV  SD
Sbjct: 1434 SVNAVA-YSPDGKRIVTGSD 1452


>gi|298376771|ref|ZP_06986726.1| MdsD protein [Bacteroides sp. 3_1_19]
 gi|298266649|gb|EFI08307.1| MdsD protein [Bacteroides sp. 3_1_19]
          Length = 1080

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 61/337 (18%), Positives = 121/337 (35%), Gaps = 41/337 (12%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  ++D +  K              R    T        ++   G   +   F   +  S
Sbjct: 196 DIWMYDTQTGKH---TNLTDHAGEDRNAVFTPDGQTVYFLSERNGGSFNVYSFPLNTPQS 252

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                   V       +R+L+ S D  L    ++ + +   Y      +  +V +   R 
Sbjct: 253 IT-----AVTKFKTHPVRFLSTSSDNTLC---YTYDGE--IYTQRPGVNPQKVRIDLIRD 302

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D+      N      +   S +GK+  ++++     +++      N T+++TNT      
Sbjct: 303 DQEQISDLNSSKGATSATVSPDGKQIALTLRG----EVFVTSADYNTTKQITNTPAAETG 358

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPVWS 355
             +SPD+  + + S+R G  QLY+ +               +++ +   K      P +S
Sbjct: 359 VCFSPDNRTLAYASERGGNWQLYLAKIARKEEANFPNATIIEEEVLLPSKTVERNYPQFS 418

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFS 407
           P    +AF +   ++  + V+  +  + R + + S   +       +WSP G+   L F 
Sbjct: 419 PDAKELAFIE---DRMRLMVVNLETKKVRQVTDGSTWYSTAGGFDYSWSPDGKWFTLRFI 475

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQWV 443
             K  D  S +  +   G   T +    Y S  PQWV
Sbjct: 476 GNKH-DPYSDIGLVSAQGGEITNLTNSGYTSTSPQWV 511



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 74/215 (34%), Gaps = 34/215 (15%)

Query: 258 SMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           S  + P +      S +G       + D    IY V  +     +LT       +  +SP
Sbjct: 16  SYAVTPLWMRDVQISPDGTEIAFCYKGD----IYKVPAKGGTATQLTTQASYECTPIWSP 71

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
           D  QI F SDR G   L+VM SNG   + ++    AS     ++P G  + F+       
Sbjct: 72  DGKQIAFASDRNGNFDLFVMPSNGGTAQCLTT-HSASEIPSAFTPDGKYVLFSASIQDPA 130

Query: 367 ------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--------- 411
                 +     +  +   G +   ++     +   +  SG++ ++  +K          
Sbjct: 131 QSALFPTSAMTELYKVPIGGGRTEQVLGTP-AEMVCFDKSGKTFLYQDRKGFEDEWRKHH 189

Query: 412 -GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                  ++  D   G++  L +      +  +  
Sbjct: 190 TSSVTRDIWMYDTQTGKHTNLTDHAGEDRNAVFTP 224



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 85/246 (34%), Gaps = 35/246 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S    P +S +GK+   +  +
Sbjct: 29  ISPDGTEIAFCY--KGDIYKV----PAKGGTATQLTTQASYECTPIWSPDGKQIAFASDR 82

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
           +   D++ +       + LT      I ++++PD   ++F +                 +
Sbjct: 83  NGNFDLFVMPSNGGTAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTE 142

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +   G   +++     A       S  G    +               S     I +
Sbjct: 143 LYKVPIGGGRTEQVL-GTPAEMVCFDKS--GKTFLYQDRKGFEDEWRKHHTSSVTRDIWM 199

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                 +   L +     +   ++P G+++ F  +++G +   +YS  LN   +++    
Sbjct: 200 YDTQTGKHTNLTDHAGEDRNAVFTPDGQTVYFLSERNGGS-FNVYSFPLN-TPQSITAVT 257

Query: 435 AYASDP 440
            + + P
Sbjct: 258 KFKTHP 263



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 73/217 (33%), Gaps = 32/217 (14%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +       
Sbjct: 40  YKGDIYKVPAKGGTATQLTTQAS-YECTPIWSPDGKQIAFASDRNGNFDLFVMPSN--GG 96

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-----------IYSVDLQSNATERL 297
             + +    +  +   F+ +GK  L S    +              +Y V +    TE++
Sbjct: 97  TAQCLTTHSASEIPSAFTPDGKYVLFSASIQDPAQSALFPTSAMTELYKVPIGGGRTEQV 156

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  +       ++ D
Sbjct: 157 LGTPAEMV--CFDKSGKTFLYQ-DRKGFEDEWRKHHTSSVTRDIWMYDTQTGKHTNLT-D 212

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDG 380
                 + V++P G  + F ++ +G  F +     + 
Sbjct: 213 HAGEDRNAVFTPDGQTVYFLSERNGGSFNVYSFPLNT 249



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 121/352 (34%), Gaps = 48/352 (13%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK   L +   ++ V        K+  ++PA+   +  +  +      +   G+
Sbjct: 319 ATVSPDGKQIALTLRGEVF-VTSADYNTTKQITNTPAAETGVCFSPDNRTLAYASERGGN 377

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +   +  ++    +     ++            L PS+      P+FSP+ +++A+    
Sbjct: 378 WQLYLAKIARKEEANFPNATII-------EEEVLLPSKTVERNYPQFSPDAKELAFI--- 427

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----RFSSNGKR--ALISVQK-DEAMDI 284
            ED +R+ +++    +  +++ +  +           +S +GK         K D   DI
Sbjct: 428 -EDRMRLMVVNLET-KKVRQVTDGSTWYSTAGGFDYSWSPDGKWFTLRFIGNKHDPYSDI 485

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-----------KEQLYVMQS 333
             V  Q      LTN+ + + S  +  D + I+F ++R G              L  M  
Sbjct: 486 GLVSAQGGEITNLTNSGYTSTSPQWVLDGNAILFTTERYGMRAHASWGSLNDAMLVFMNQ 545

Query: 334 NGSDQKRISQDKE-------------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +  D+ R+S++                         +           +   + +     
Sbjct: 546 DAYDKFRLSKEDYELQKELEKEQKEVTGDKTDDKKKEDKADEKKDEKPKDIVVELKGIQD 605

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              RL    S + +   S +G +L +      +    L+ +DL  +   L++
Sbjct: 606 RILRLTPNSSEMGSAVISKNGETLYYFS--AFEDKYDLWKMDLRKKETKLLH 655


>gi|320095137|ref|ZP_08026845.1| WD domain protein [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319977919|gb|EFW09554.1| WD domain protein [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 1167

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 60/401 (14%), Positives = 129/401 (32%), Gaps = 59/401 (14%)

Query: 58   IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
                  ++S+V+   L R  +  ++ +    Q +           W+  GAQ+L    V 
Sbjct: 749  TSGTPQQLSDVLIAPLTRHGLLRILPE---IQILGGQSDDVTAVAWSPDGAQLL---TVS 802

Query: 118  KEGKDRLRVEFRLWDVKDRKQIIGKKFF--SSPASW-RKIAHTISDDIYQSITGEKGDFN 174
            ++G        R+WD    +  +        +  +W     H ++  I + I        
Sbjct: 803  RDG------TVRVWDATTGENTLTLTHTESVTAVAWSPDSTHILTAGIDRHIRIWNLSRK 856

Query: 175  SRILFVSESVVSGIIKNS----------------LCVMDRDGANIRYLTPSRDQILFEPR 218
            + I  +        I+ S                +   D D   I++     D  L    
Sbjct: 857  TNIALIHPFGWFRYIEWSPDSTQVLAGTEEGTVGIWSTDNDHYTIKF---EHDCYLQAAL 913

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            +SP+ + +            V++ +T        + N  S + +  +S + K   + +++
Sbjct: 914  WSPDSKHIL-----TGSGKSVHIWNTATGTIVLTL-NHSSWVRSVAWSPDSKHIAVGLEQ 967

Query: 279  DEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            +           +     LT N      S ++SPD S+IV +++ +    + V       
Sbjct: 968  NAT---CVFTAATG-ATVLTLNHSSWVRSVAWSPDGSKIVTQTNSD----ICVWDMRTGK 1019

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +   +     +     WSP    +           I      G+    L     + + TW
Sbjct: 1020 KTH-TFAHNGNLIMAEWSPDSTHLLMKLKHNT--HIW-SSITGNTTLTLTHTGRINSATW 1075

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET--LINTPAY 436
            SP G  ++ +     D  +++++    G      +   P  
Sbjct: 1076 SPDGNHILTASD---DGTARIWNA-ATGEPVRFFITALPGG 1112



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 102/294 (34%), Gaps = 47/294 (15%)

Query: 113  TGRVIKEGKDRLRVEFR--------LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
            T  +     D   ++F         LW    +  + G            I +T +  I  
Sbjct: 888  TVGIWSTDNDHYTIKFEHDCYLQAALWSPDSKHILTGSGKSV------HIWNTATGTIVL 941

Query: 165  SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            ++       +      S+ +  G+ +N+ CV          LT +    +    +SP+  
Sbjct: 942  TLNHSSWVRSVAWSPDSKHIAVGLEQNATCVFTA-ATGATVLTLNHSSWVRSVAWSPDGS 1000

Query: 225  KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            K+   T  D     + + D R  +           ++   +S +    L+ ++ +  +  
Sbjct: 1001 KIVTQTNSD-----ICVWDMRTGKKTHTFA-HNGNLIMAEWSPDSTHLLMKLKHNTHIWS 1054

Query: 285  YSVDLQSNATERLTNTLFINISASYSPDSSQ----------IVFESDREGKEQLYVMQSN 334
                +  N T  LT+T  IN SA++SPD +            ++ +      + ++    
Sbjct: 1055 ---SITGNTTLTLTHTGRIN-SATWSPDGNHILTASDDGTARIWNAATGEPVRFFITALP 1110

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            G +   ++ D+         SP      +      ++AI     DG++ER+ VE
Sbjct: 1111 GGECAVLTPDQTRVIGA---SP------YAWRWLGRYAI---HPDGTRERIPVE 1152


>gi|294141048|ref|YP_003557026.1| hypothetical protein SVI_2277 [Shewanella violacea DSS12]
 gi|293327517|dbj|BAJ02248.1| hypothetical protein [Shewanella violacea DSS12]
          Length = 703

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 86/229 (37%), Gaps = 5/229 (2%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +  +   DE       +        +++ N    I    +  +G R + S   
Sbjct: 318 FSPDGKHLVISRTLDEGFSEDLFLFDISKGELEQLTNSEGDIKGLAWHPDGDRIIFSANV 377

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
               D Y   L+   T +L N    +    + P+S  ++F + +E      +        
Sbjct: 378 SGNRDGYIFSLKDKETTKL-NIPGFSY-PRFIPNSQDVIFHNWKELLSLSSLSLGGSLAT 435

Query: 339 KRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPT 396
                   E SY  P +SP  + +AF       + I +   DG++   L    S+L  P+
Sbjct: 436 SPFPLIQSEYSYHSPHYSPAINKLAFISNESGSYEIWMSNLDGTERTRLTSLSSHLTFPS 495

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD-PQWVG 444
           WS  G+ + F   K     + LY +++N +    +++       P W+ 
Sbjct: 496 WSHDGKYIAFLGPKTKSKINSLYVLNVNTQTVRQVSSEFKQHFRPSWLA 544



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 102/260 (39%), Gaps = 21/260 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--- 259
            + +     ++ F    SP+ + +AY   D+     V L+D   +     +   +     
Sbjct: 252 PKVIGQCTGEVDFSLAISPDSKTLAYVGSDNARQTSVKLLDLNGNEKTHILYKCQDDCLY 311

Query: 260 -ILAPRFSSNGKRALISVQKDEAM--DIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             +   FS +GK  +IS   DE    D++  D+     E+LTN+       ++ PD  +I
Sbjct: 312 EEVDVEFSPDGKHLVISRTLDEGFSEDLFLFDISKGELEQLTNSEGDIKGLAWHPDGDRI 371

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---SGEKFAI 373
           +F ++  G    Y+      +  +++      +  P + P    + F  +          
Sbjct: 372 IFSANVSGNRDGYIFSLKDKETTKLNIPG---FSYPRFIPNSQDVIFHNWKELLSLSSLS 428

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                  S   L+  + +  +P +SP+   L F   + G    +++  +L+G   T + +
Sbjct: 429 LGGSLATSPFPLIQSEYSYHSPHYSPAINKLAFISNESGS--YEIWMSNLDGTERTRLTS 486

Query: 434 -------PAYASDPQWVGFM 446
                  P+++ D +++ F+
Sbjct: 487 LSSHLTFPSWSHDGKYIAFL 506



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 95/250 (38%), Gaps = 19/250 (7%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSS 267
           S       P  SP+ Q + Y+         +Y+   + +D +P+++           + S
Sbjct: 164 SDPGREVYPSISPDNQYLVYSWRRIGQRPNLYIKSMSDLDTSPRQLTFSEFYEGRVVWHS 223

Query: 268 NGKRALI-----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SD 321
           N +            + E + +  + L+     + T    ++ S + SPDS  + +  SD
Sbjct: 224 NSEDIYYQRKHWIYDQCEIVQLNIITLEPKVIGQCTGE--VDFSLAISPDSKTLAYVGSD 281

Query: 322 REGKEQLYVMQSNGSDQKRISQ----DKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGV 375
              +  + ++  NG+++  I      D      D  +SP G  +  ++   E F   + +
Sbjct: 282 NARQTSVKLLDLNGNEKTHILYKCQDDCLYEEVDVEFSPDGKHLVISRTLDEGFSEDLFL 341

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                 +   L     +++   W P G  +IFS    G+     Y   L  +  T +N P
Sbjct: 342 FDISKGELEQLTNSEGDIKGLAWHPDGDRIIFSANVSGNRDG--YIFSLKDKETTKLNIP 399

Query: 435 AYASDPQWVG 444
            + S P+++ 
Sbjct: 400 GF-SYPRFIP 408



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 92/276 (33%), Gaps = 29/276 (10%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA-HTISDDIYQSITGEKGDFN 174
           + +   +    +  L+D+   +    ++  +S    + +A H   D I  S     G+ +
Sbjct: 327 ISRTLDEGFSEDLFLFDISKGEL---EQLTNSEGDIKGLAWHPDGDRIIFS-ANVSGNRD 382

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
             I  + +                     +  T         PRF PN Q V +  + + 
Sbjct: 383 GYIFSLKD---------------------KETTKLNIPGFSYPRFIPNSQDVIFHNWKEL 421

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             L    +   +  +P  +        +P +S    +      +  + +I+  +L     
Sbjct: 422 LSLSSLSLGGSLATSPFPLIQSEYSYHSPHYSPAINKLAFISNESGSYEIWMSNLDGTER 481

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDP 352
            RLT+        S+S D   I F   +       LYV+  N    +++S + +  +F P
Sbjct: 482 TRLTSLSSHLTFPSWSHDGKYIAFLGPKTKSKINSLYVLNVNTQTVRQVSSEFKQ-HFRP 540

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            W      I     S   F++     +G     L++
Sbjct: 541 SWLADDSGIIAAAKSDNVFSLYAFPINGDLPYKLLD 576


>gi|308493667|ref|XP_003109023.1| CRE-TAG-10 protein [Caenorhabditis remanei]
 gi|308247580|gb|EFO91532.1| CRE-TAG-10 protein [Caenorhabditis remanei]
          Length = 496

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 84/227 (37%), Gaps = 38/227 (16%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             Y  +D            R     +R+ +          S +G +   +  +   +++Y
Sbjct: 201 FIYIHFDSR------FQVDRYGNFVQRLTDTPGYDAEGVVSPDGTKIAFTSIRSGDLELY 254

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------------------- 326
            ++   +   ++TN L  +  + ++PD  +++F + R                       
Sbjct: 255 VMNTDGSNLTQVTNELGYDGGSFFTPDGKRLIFRASRPKTPEDIAKYKKLLSYNLVEPIA 314

Query: 327 -QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKD 379
            +L+++  +G + ++I+   EA++   + +     I F+            F+I ++  D
Sbjct: 315 MELFIVDIDGKNMRQITHLGEANWAPYMLN-DNKRIVFSSNYNAAANGFGAFSIFMINDD 373

Query: 380 GSQERLLVEDSNLQAPTW---SPSGRSLIFSRKKDG-DTGSKLYSID 422
           G+    +      Q  ++   S  G+ L++   ++G +    L+  D
Sbjct: 374 GTGLEQIT-FGKDQFNSFAMQSYDGKKLVWGSSRNGTNYALNLFIAD 419



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 65/173 (37%), Gaps = 26/173 (15%)

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + VD   N  +RLT+T   +     SPD ++I F S R G  +LYVM ++GS+  +++ +
Sbjct: 210 FQVDRYGNFVQRLTDTPGYDAEGVVSPDGTKIAFTSIRSGDLELYVMNTDGSNLTQVTNE 269

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEK--------------------FAIGVMKKDGSQER 384
                    ++P G  + F     +                       + ++  DG   R
Sbjct: 270 L-GYDGGSFFTPDGKRLIFRASRPKTPEDIAKYKKLLSYNLVEPIAMELFIVDIDGKNMR 328

Query: 385 LLVEDS-NLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLIN 432
            +        AP      + ++FS       +G     ++ I+ +G     I 
Sbjct: 329 QITHLGEANWAPYMLNDNKRIVFSSNYNAAANGFGAFSIFMINDDGTGLEQIT 381



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 81/211 (38%), Gaps = 30/211 (14%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +DR G N             E   SP+  K+A+ +    D L +Y+M+T       ++ N
Sbjct: 212 VDRYG-NFVQRLTDTPGYDAEGVVSPDGTKIAFTSIRSGD-LELYVMNTD-GSNLTQVTN 268

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAM--------------------DIYSVDLQSNATE 295
                    F+ +GKR +    + +                      +++ VD+      
Sbjct: 269 ELGYDGGSFFTPDGKRLIFRASRPKTPEDIAKYKKLLSYNLVEPIAMELFIVDIDGKNMR 328

Query: 296 RLTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQDKEASY 349
           ++T+    N +     D+ +IVF S+        G   ++++  +G+  ++I+  K+   
Sbjct: 329 QITHLGEANWAPYMLNDNKRIVFSSNYNAAANGFGAFSIFMINDDGTGLEQITFGKDQFN 388

Query: 350 FDPVWSPQGDLIAF-TKFSGEKFAIGVMKKD 379
              + S  G  + + +  +G  +A+ +   D
Sbjct: 389 SFAMQSYDGKKLVWGSSRNGTNYALNLFIAD 419



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 23/137 (16%)

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           + +   G+  +R++ D      + V SP G  IAFT        + VM  DGS    +  
Sbjct: 210 FQVDRYGNFVQRLT-DTPGYDAEGVVSPDGTKIAFTSIRSGDLELYVMNTDGSNLTQVTN 268

Query: 389 D-SNLQAPTWSPSGRSLIFSRKKDGDT------------------GSKLYSIDLNGRNET 429
           +        ++P G+ LIF   +                        +L+ +D++G+N  
Sbjct: 269 ELGYDGGSFFTPDGKRLIFRASRPKTPEDIAKYKKLLSYNLVEPIAMELFIVDIDGKNMR 328

Query: 430 LINTPAYASDPQWVGFM 446
            I     A+   W  +M
Sbjct: 329 QITHLGEAN---WAPYM 342



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 13/103 (12%), Positives = 41/103 (39%), Gaps = 8/103 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRI 246
            L ++D DG N+R +T   +   + P    + +++ +++  +          +++++   
Sbjct: 316 ELFIVDIDGKNMRQITHLGE-ANWAPYMLNDNKRIVFSSNYNAAANGFGAFSIFMINDDG 374

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
               +              S +GK+ +    ++     Y+++L
Sbjct: 375 TGLEQITFGKDQFNSFAMQSYDGKKLVWGSSRNGT--NYALNL 415


>gi|29346818|ref|NP_810321.1| putative Tricorn-like protease [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29338715|gb|AAO76515.1| putative Tricorn-like protease [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 1102

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 81/221 (36%), Gaps = 34/221 (15%)

Query: 252 RIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +    S  + P +      S +GK  +   + D    IY V +Q     +LT       
Sbjct: 11  VLTALSSYAITPLWMRDARISPDGKEIVFCYKGD----IYKVPVQGGTATQLTTQASYEA 66

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  +SPD  QI F SDR G   L++M ++G   +R++    AS     ++P G  + F+ 
Sbjct: 67  NPVWSPDGKQIAFASDRNGNFDLFIMSADGGTARRLTY-HSASEIPSAFTPDGKFVLFSA 125

Query: 366 F-----------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--- 411
                       +G    +  +   G +   ++     +   +  SG++ ++  +K    
Sbjct: 126 SIQDPAQSALFPTGAMTELYKVPVTGGRTEQVLATP-AEWVCFDKSGKNFLYQDRKGFED 184

Query: 412 -------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                        ++  D   G++  L N      +P +  
Sbjct: 185 EWRKHHTSSITRDVWLYDASTGKHTNLTNREGEDRNPVYAP 225



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 79/226 (34%), Gaps = 33/226 (14%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            + + R SP+ +++ +      DI +V +          ++    S    P +S +GK+ 
Sbjct: 24  WMRDARISPDGKEIVFCY--KGDIYKVPVQ----GGTATQLTTQASYEANPVWSPDGKQI 77

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
             +  ++   D++ +        RLT      I ++++PD   ++F +            
Sbjct: 78  AFASDRNGNFDLFIMSADGGTARRLTYHSASEIPSAFTPDGKFVLFSASIQDPAQSALFP 137

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGE 369
                +LY +   G   +++     A +     S  G    +               S  
Sbjct: 138 TGAMTELYKVPVTGGRTEQVL-ATPAEWVCFDKS--GKNFLYQDRKGFEDEWRKHHTSSI 194

Query: 370 KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDT 414
              + +      +   L   +   + P ++P G S+ F  +++G +
Sbjct: 195 TRDVWLYDASTGKHTNLTNREGEDRNPVYAPDGNSVYFLSERNGGS 240



 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 56/323 (17%), Positives = 105/323 (32%), Gaps = 82/323 (25%)

Query: 195 VMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           V   D +  ++    +R+     P ++P+   V + +  +     VY       +  K I
Sbjct: 198 VWLYDASTGKHTNLTNREGEDRNPVYAPDGNSVYFLSERNGGSFNVYNFALNTPQEVKAI 257

Query: 254 GNFRSM-----------------------------------------------------I 260
             FR+                                                       
Sbjct: 258 TTFRTHPVRFLSISDKGTLCYTYDGELYTQEPNARPKKVNVDLVRDDEKEIATLRFSQGA 317

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +   S +GK+    V+ D    ++        T+++TNT       S++PD+  +V+ S
Sbjct: 318 TSASVSPDGKQVAFIVRGD----VFVTSTDYATTKQITNTPAKESGVSFAPDNRTLVYAS 373

Query: 321 DREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +R G  QLY              +   +++ +   K      P +SP G  +AF +   +
Sbjct: 374 ERTGNWQLYTAKIARKEEANFPNATLIEEEVLLPSKTVERAYPQYSPDGKELAFIE---D 430

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRS--LIFSRKKDGDTGSKLYSI 421
           +  + V+     + R + + S            WSP G+   L F   +  D  S +  +
Sbjct: 431 RSRLMVLNLKTKKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRH-DPYSDIGIV 489

Query: 422 DLNGRNETLINTPAYAS-DPQWV 443
              G   T +    Y S  P+WV
Sbjct: 490 SAQGGTITNLTNSGYISGSPRWV 512



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 75/215 (34%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++VA+    D        + +      K+I N  +      F+ + +  + + +
Sbjct: 321 SVSPDGKQVAFIVRGD------VFVTSTDYATTKQITNTPAKESGVSFAPDNRTLVYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS------------ASYSPDSSQIVFESDREGK 325
           +     +Y+  +         N   I                 YSPD  ++ F  DR   
Sbjct: 375 RTGNWQLYTAKIARKEEANFPNATLIEEEVLLPSKTVERAYPQYSPDGKELAFIEDRS-- 432

Query: 326 EQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  IG++  
Sbjct: 433 -RLMVLNLKTKKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDIGIVSA 491

Query: 379 DGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G     L     +  +P W   G +++F  ++ G
Sbjct: 492 QGGTITNLTNSGYISGSPRWVLDGNAILFQTERYG 526



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 84/234 (35%), Gaps = 32/234 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +  +    
Sbjct: 41  YKGDIYKVPVQGGTATQLTTQAS-YEANPVWSPDGKQIAFASDRNGNFDLFIM--SADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERL 297
             +R+    +  +   F+ +GK  L S                  ++Y V +    TE++
Sbjct: 98  TARRLTYHSASEIPSAFTPDGKFVLFSASIQDPAQSALFPTGAMTELYKVPVTGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  ++      ++ +
Sbjct: 158 LATPAEWV--CFDKSGKNFLYQ-DRKGFEDEWRKHHTSSITRDVWLYDASTGKHTNLT-N 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +E    +PV++P G+ + F ++ +G  F +     +  QE   +         +
Sbjct: 214 REGEDRNPVYAPDGNSVYFLSERNGGSFNVYNFALNTPQEVKAITTFRTHPVRF 267



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 85/220 (38%), Gaps = 22/220 (10%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK     V   ++ V        K+  ++PA    ++    +      +   G+
Sbjct: 320 ASVSPDGKQVAFIVRGDVF-VTSTDYATTKQITNTPAKESGVSFAPDNRTLVYASERTGN 378

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +      ++    +     +L            L PS+      P++SP+ +++A+    
Sbjct: 379 WQLYTAKIARKEEANFPNATLI-------EEEVLLPSKTVERAYPQYSPDGKELAFI--- 428

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRA---LISVQKDEAMDI 284
            ED  R+ +++ +  +  +++ +              +S +GK      I  + D   DI
Sbjct: 429 -EDRSRLMVLNLKT-KKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDI 486

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
             V  Q      LTN+ +I+ S  +  D + I+F+++R G
Sbjct: 487 GIVSAQGGTITNLTNSGYISGSPRWVLDGNAILFQTERYG 526


>gi|194367095|ref|YP_002029705.1| transcriptional regulator domain-containing protein
           [Stenotrophomonas maltophilia R551-3]
 gi|194349899|gb|ACF53022.1| transcriptional regulator domain protein [Stenotrophomonas
           maltophilia R551-3]
          Length = 774

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 60/321 (18%), Positives = 114/321 (35%), Gaps = 23/321 (7%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           D      I  +   ++PA    +    + D + S + +       I F   S   G    
Sbjct: 242 DGAGGGAIKVQTSGNAPARQLALPPKGASDRFPSWSPDG----REIAFARFSADGG---C 294

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +    G  +R  T      L    ++P+ + + + +       R   +        +
Sbjct: 295 QVLIASATGGVVRQATRCDGTELLSFDWTPDGRGLVFGSMVGRYAHRGIRVLDLASGQWR 354

Query: 252 RIG---NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            +    +      APR+S +GK  +  V+  +  D++ +     A E+LTN        +
Sbjct: 355 ALAYEVDQDDFDYAPRYSPDGKWLVF-VRNPQMGDLWRMPAGGGALEQLTNESAEQRGWA 413

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +  D   IVF    + + +LY +     +++ +          P  S  GD++AF     
Sbjct: 414 WLGDGRSIVFGRRVDSEVRLYYLDV---ERRTLRDAGLDDAQWPTVSRHGDVLAFVHRR- 469

Query: 369 EKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            +F +  M   G   ERL         P  +P GR L+F+  + G     L+  D+  R 
Sbjct: 470 AQFGVFRMPMAGGGAERLFASSGRDGQPMAAPDGRQLVFTSDRSGSFA--LWWADMQ-RP 526

Query: 428 ETLINTPAYASD----PQWVG 444
           ++L        +    P W  
Sbjct: 527 DSLRPIEGLRPEGRQAPDWSA 547



 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 90/252 (35%), Gaps = 17/252 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFR-- 257
                L  +       P  SP+  +VAY    +D        + T  +   +++      
Sbjct: 209 QRPYRLITATSGFETYPTLSPDGSQVAYEGANEDGAGGGAIKVQTSGNAPARQLALPPKG 268

Query: 258 SMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQ 315
           +    P +S +G+    +    D    +           + T       +S  ++PD   
Sbjct: 269 ASDRFPSWSPDGREIAFARFSADGGCQVLIASATGGVVRQATRCDGTELLSFDWTPDGRG 328

Query: 316 IVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKF 371
           +VF S   R     + V+       + ++ + +   FD  P +SP G  + F + + +  
Sbjct: 329 LVFGSMVGRYAHRGIRVLDLASGQWRALAYEVDQDDFDYAPRYSPDGKWLVFVR-NPQMG 387

Query: 372 AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +  M   G     L  +S  Q    W   GRS++F R+ D +   +LY +D+    E  
Sbjct: 388 DLWRMPAGGGALEQLTNESAEQRGWAWLGDGRSIVFGRRVDSEV--RLYYLDV----ERR 441

Query: 431 INTPAYASDPQW 442
               A   D QW
Sbjct: 442 TLRDAGLDDAQW 453



 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 75/211 (35%), Gaps = 16/211 (7%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---TERLTNTL-- 301
            R  + I         P  S +G +       ++     ++ +Q++      +L      
Sbjct: 209 QRPYRLITATSGFETYPTLSPDGSQVAYEGANEDGAGGGAIKVQTSGNAPARQLALPPKG 268

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             +   S+SPD  +I F     +G  Q+ +  + G   ++ ++          W+P G  
Sbjct: 269 ASDRFPSWSPDGREIAFARFSADGGCQVLIASATGGVVRQATRCDGTELLSFDWTPDGRG 328

Query: 361 IAFTKFSGEKFA--IGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           + F    G      I V+     Q R L     +D    AP +SP G+ L+F R      
Sbjct: 329 LVFGSMVGRYAHRGIRVLDLASGQWRALAYEVDQDDFDYAPRYSPDGKWLVFVRN---PQ 385

Query: 415 GSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
              L+ +   G   E L N  A      W+G
Sbjct: 386 MGDLWRMPAGGGALEQLTNESAEQRGWAWLG 416



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 66/169 (39%), Gaps = 17/169 (10%)

Query: 295 ERLTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRIS-QDKEASYF 350
             +T T       + SPD SQ+ +E    D  G   + V  S  +  ++++   K AS  
Sbjct: 213 RLITATSGFETYPTLSPDGSQVAYEGANEDGAGGGAIKVQTSGNAPARQLALPPKGASDR 272

Query: 351 DPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFS 407
            P WSP G  IAF +FS      + +    G   R     + + L +  W+P GR L+F 
Sbjct: 273 FPSWSPDGREIAFARFSADGGCQVLIASATGGVVRQATRCDGTELLSFDWTPDGRGLVFG 332

Query: 408 RKKDGDTGSKLYSIDLNGRNETLIN----------TPAYASDPQWVGFM 446
                     +  +DL       +            P Y+ D +W+ F+
Sbjct: 333 SMVGRYAHRGIRVLDLASGQWRALAYEVDQDDFDYAPRYSPDGKWLVFV 381



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 59/373 (15%), Positives = 114/373 (30%), Gaps = 86/373 (23%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVE-FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD 160
           DW   G + LV G ++     R      R+ D+   +             WR +A+ +  
Sbjct: 321 DWTPDG-RGLVFGSMV----GRYAHRGIRVLDLASGQ-------------WRALAYEVDQ 362

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           D +        D    ++FV    +       L  M   G  +  LT    +      + 
Sbjct: 363 DDFDYAPRYSPDGK-WLVFVRNPQMGD-----LWRMPAGGGALEQLTNESAEQRGW-AWL 415

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQK 278
            + + + +    D ++   YL         +R      +  A  P  S +G       ++
Sbjct: 416 GDGRSIVFGRRVDSEVRLYYL------DVERRTLRDAGLDDAQWPTVSRHGDVLAFVHRR 469

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            +   ++ + +     ERL  +   +     +PD  Q+VF SDR G   L+       D 
Sbjct: 470 AQFG-VFRMPMAGGGAERLFASSGRDGQPMAAPDGRQLVFTSDRSGSFALWWADMQRPDS 528

Query: 339 KR-ISQDKEASYFDPVWSPQ---------------------------------------- 357
            R I   +      P WS                                          
Sbjct: 529 LRPIEGLRPEGRQAPDWSADSRQLLVVGRDEHGRTVVYEIAPRDERLQPLPVPVEQPLQA 588

Query: 358 ------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                 G L+   + + ++  + +  +  +  R L     +    +   G  ++F+R   
Sbjct: 589 LYGATPGQLLVVERDAEQRTRLSLFDRSVTPWRRLASIDGVSQARFDRGGGRVLFTRLAS 648

Query: 412 GDTGSKLYSIDLN 424
           G     L+S+D +
Sbjct: 649 GG----LWSVDAS 657



 Score = 37.3 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 60/155 (38%), Gaps = 5/155 (3%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R +   R +    P +S + +++     D+     VY +  R +R           + A
Sbjct: 529 LRPIEGLRPEGRQAPDWSADSRQLLVVGRDEHGRTVVYEIAPRDERLQPLPVPVEQPLQA 588

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              ++ G+  ++    ++   +   D       RL +   +   A +     +++F    
Sbjct: 589 LYGATPGQLLVVERDAEQRTRLSLFDRSVTPWRRLASIDGV-SQARFDRGGGRVLFTRLA 647

Query: 323 EGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWS 355
            G   L+ + ++ S    +++S+D+ + +    W+
Sbjct: 648 SGG--LWSVDASLSPASVQQVSEDRPSRWRYRTWT 680


>gi|253572275|ref|ZP_04849678.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251838050|gb|EES66138.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 877

 Score =  120 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 81/221 (36%), Gaps = 34/221 (15%)

Query: 252 RIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +    S  + P +      S +GK  +   + D    IY V +Q     +LT       
Sbjct: 11  VLTALSSYAITPLWMRDARISPDGKEIVFCYKGD----IYKVPVQGGTATQLTTQASYEA 66

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  +SPD  QI F SDR G   L++M ++G   +R++    AS     ++P G  + F+ 
Sbjct: 67  NPVWSPDGKQIAFASDRNGNFDLFIMPADGGTARRLTY-HSASEIPSAFTPDGKFVLFSA 125

Query: 366 F-----------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--- 411
                       +G    +  +   G +   ++     +   +  SG++ ++  +K    
Sbjct: 126 SIQDPAQSALFPTGAMTELYKVPVTGGRTEQVLATP-AEWVCFDKSGKNFLYQDRKGFED 184

Query: 412 -------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                        ++  D   G++  L N      +P +  
Sbjct: 185 EWRKHHTSSITRDVWLYDASTGKHTNLTNREGEDRNPVYAP 225



 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 79/226 (34%), Gaps = 33/226 (14%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            + + R SP+ +++ +      DI +V +          ++    S    P +S +GK+ 
Sbjct: 24  WMRDARISPDGKEIVFCY--KGDIYKVPVQ----GGTATQLTTQASYEANPVWSPDGKQI 77

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
             +  ++   D++ +        RLT      I ++++PD   ++F +            
Sbjct: 78  AFASDRNGNFDLFIMPADGGTARRLTYHSASEIPSAFTPDGKFVLFSASIQDPAQSALFP 137

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGE 369
                +LY +   G   +++     A +     S  G    +               S  
Sbjct: 138 TGAMTELYKVPVTGGRTEQVL-ATPAEWVCFDKS--GKNFLYQDRKGFEDEWRKHHTSSI 194

Query: 370 KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDT 414
              + +      +   L   +   + P ++P G S+ F  +++G +
Sbjct: 195 TRDVWLYDASTGKHTNLTNREGEDRNPVYAPDGNSVYFLSERNGGS 240



 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 56/323 (17%), Positives = 103/323 (31%), Gaps = 82/323 (25%)

Query: 195 VMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           V   D +  ++    +R+     P ++P+   V + +  +     VY       +  K I
Sbjct: 198 VWLYDASTGKHTNLTNREGEDRNPVYAPDGNSVYFLSERNGGSFNVYNFALNTPQEVKAI 257

Query: 254 GNFRSM-----------------------------------------------------I 260
             FR+                                                       
Sbjct: 258 TTFRTHPVRFLSISDKGTLCYTYDGELYTQEPNARPKKVNVDLVRDDEKEIATLRFSQGA 317

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +   S +GK+    V+ D    ++        T+++TNT       S++PD+  +V+ S
Sbjct: 318 TSASVSPDGKQVAFIVRGD----VFVTSTDYATTKQITNTPAKEAGVSFAPDNRTLVYAS 373

Query: 321 DREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +R G  QLY              +   +++ +   K      P +SP G  +AF +    
Sbjct: 374 ERTGNWQLYTAKIARKEEANFPNATLIEEEVLLPSKTIERAYPQYSPDGKELAFIEDRN- 432

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRS--LIFSRKKDGDTGSKLYSI 421
              + V+     + R + + S            WSP G+   L F   +  D  S +  +
Sbjct: 433 --RLMVLNLKTKKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRH-DPYSDIGIV 489

Query: 422 DLNGRNETLINTPAYAS-DPQWV 443
              G   T +    Y S  P+WV
Sbjct: 490 SAQGGTITNLTNSGYISGSPRWV 512



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 75/215 (34%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++VA+    D        + +      K+I N  +      F+ + +  + + +
Sbjct: 321 SVSPDGKQVAFIVRGD------VFVTSTDYATTKQITNTPAKEAGVSFAPDNRTLVYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS------------ASYSPDSSQIVFESDREGK 325
           +     +Y+  +         N   I                 YSPD  ++ F  DR   
Sbjct: 375 RTGNWQLYTAKIARKEEANFPNATLIEEEVLLPSKTIERAYPQYSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  IG++  
Sbjct: 432 NRLMVLNLKTKKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDIGIVSA 491

Query: 379 DGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G     L     +  +P W   G +++F  ++ G
Sbjct: 492 QGGTITNLTNSGYISGSPRWVLDGNAILFQTERYG 526



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 83/234 (35%), Gaps = 32/234 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +       
Sbjct: 41  YKGDIYKVPVQGGTATQLTTQAS-YEANPVWSPDGKQIAFASDRNGNFDLFIM--PADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERL 297
             +R+    +  +   F+ +GK  L S                  ++Y V +    TE++
Sbjct: 98  TARRLTYHSASEIPSAFTPDGKFVLFSASIQDPAQSALFPTGAMTELYKVPVTGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  ++      ++ +
Sbjct: 158 LATPAEWV--CFDKSGKNFLYQ-DRKGFEDEWRKHHTSSITRDVWLYDASTGKHTNLT-N 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +E    +PV++P G+ + F ++ +G  F +     +  QE   +         +
Sbjct: 214 REGEDRNPVYAPDGNSVYFLSERNGGSFNVYNFALNTPQEVKAITTFRTHPVRF 267



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 59/127 (46%), Gaps = 13/127 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-----SMI 260
           L PS+      P++SP+ +++A+     ED  R+ +++ +  +  +++ +          
Sbjct: 405 LLPSKTIERAYPQYSPDGKELAFI----EDRNRLMVLNLKT-KKVRQVTDGSTWYNTGGG 459

Query: 261 LAPRFSSNGKRA---LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               +S +GK      I  + D   DI  V  Q      LTN+ +I+ S  +  D + I+
Sbjct: 460 FDYEWSPDGKWFTLEFIGNRHDPYSDIGIVSAQGGTITNLTNSGYISGSPRWVLDGNAIL 519

Query: 318 FESDREG 324
           F+++R G
Sbjct: 520 FQTERYG 526


>gi|218921788|emb|CAW30775.1| P46GA2.1B [Haemonchus contortus]
          Length = 354

 Score =  120 bits (300), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 51/246 (20%), Positives = 100/246 (40%), Gaps = 36/246 (14%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +  P+   IL+   F   +   A+  + D DI +V      +D    ++   +       
Sbjct: 76  FFYPNSVDILYSGNFHKVRSGHAWDVFPDYDIFKVNEYGNVLD----QLTKNKVYDSEAF 131

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-- 322
            S +GK+ + + ++   +D++  D+      +LTNT   +  AS+SPD  +IVF + R  
Sbjct: 132 ISPDGKKIVYTRKQSGDLDLWITDINGALKIQLTNTKGYDGGASFSPDGEKIVFHASRPT 191

Query: 323 ------------------EGKEQLYVMQSNG----SDQKRISQD--KEASYFDPVWSPQG 358
                               K +LYVM++N        +RI  +  + A  + P + P  
Sbjct: 192 TKDKIDIYDHLLKNDLVATNKMELYVMKANTVCGDGTGERILFNRARGALDWTPYYHPDN 251

Query: 359 DLIAFTKFSG----EKFAIGVMKKDGSQ-ERLLVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
             I F+         ++ + ++ +DG+  ER+        A P +S  G+ +++S  +  
Sbjct: 252 KRIIFSSNMNSTKSNEYHLYIVNEDGTGLERVTFGSGYFNAFPVFSHDGKKVVWSSNRGS 311

Query: 413 DTGSKL 418
                L
Sbjct: 312 TKEGDL 317



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 61/175 (34%), Gaps = 35/175 (20%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD--EDILRVYLMDTR---- 245
            L + D +GA ++    +         FSP+ +K+ +       +D + +Y    +    
Sbjct: 150 DLWITDINGA-LKIQLTNTKGYDGGASFSPDGEKIVFHASRPTTKDKIDIYDHLLKNDLV 208

Query: 246 ----------------IDRAPKRIGNFR---SMILAPRFSSNGKRALISVQ----KDEAM 282
                            D   +RI   R   ++   P +  + KR + S      K    
Sbjct: 209 ATNKMELYVMKANTVCGDGTGERILFNRARGALDWTPYYHPDNKRIIFSSNMNSTKSNEY 268

Query: 283 DIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDRE----GKEQLYVMQ 332
            +Y V+      ER+T      N    +S D  ++V+ S+R     G   L++  
Sbjct: 269 HLYIVNEDGTGLERVTFGSGYFNAFPVFSHDGKKVVWSSNRGSTKEGDLNLFIAD 323



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 65/169 (38%), Gaps = 19/169 (11%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRIS-QDKEAS 348
               +LT     N  A ++ D + +VF++   G +  Q+Y ++ +   +          +
Sbjct: 13  KNVRQLTF-EHRNTEAYFNSDDTYLVFQATGYGVDCEQIYRLELSRPVETLAKISTGIGT 71

Query: 349 YFDPVWSPQGDLIAFTKFSGE-----------KFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                + P    I ++    +            + I  + + G+    L ++    +  +
Sbjct: 72  SAATFFYPNSVDILYSGNFHKVRSGHAWDVFPDYDIFKVNEYGNVLDQLTKNKVYDSEAF 131

Query: 398 -SPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
            SP G+ ++++RK+ GD    L+  D+NG     L NT  Y     +  
Sbjct: 132 ISPDGKKIVYTRKQSGD--LDLWITDINGALKIQLTNTKGYDGGASFSP 178



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 27/59 (45%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           N RI+F S    +   +  L +++ DG  +  +T         P FS + +KV +++  
Sbjct: 251 NKRIIFSSNMNSTKSNEYHLYIVNEDGTGLERVTFGSGYFNAFPVFSHDGKKVVWSSNR 309


>gi|220931667|ref|YP_002508575.1| WD40 domain protein beta Propeller [Halothermothrix orenii H 168]
 gi|219992977|gb|ACL69580.1| WD40 domain protein beta Propeller [Halothermothrix orenii H 168]
          Length = 918

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 56/311 (18%), Positives = 121/311 (38%), Gaps = 33/311 (10%)

Query: 140 IGKKFFSSPASWRKIAHTIS-------DDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           I K++        +I+H          + + + + G + D   +     +   +  +   
Sbjct: 232 IAKEY--GEDKLVEISHKFCEEPQEGINKVIEKVLGIEVDELYKSWKFEQKRKAIELNER 289

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPK 251
           +   + +G                P  SP+ +KVAY  Y ++   +R+   D R  +   
Sbjct: 290 I---ETEGRTEITRLTEHGYFTLNPSVSPDGKKVAYYHYYNKFSAIRILTEDGRDYQLVP 346

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINIS 306
            I +    I    +S +GK+ + + Q          D+Y  D  ++   RLT        
Sbjct: 347 AISSSDGNI---TWSPDGKKLVYAKQDVYKKVYNYYDLYMYDFTTDREIRLTRG-----E 398

Query: 307 ASYSP---DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIA 362
            +Y+P   D++ I++ +  +G   +  +         I +   +  F     SP G+   
Sbjct: 399 RAYAPVFKDNNTIIYLTQDKGITSIKKIDLKTRQTSTILKGNSSFSFSSLDISPDGNKAV 458

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +     K  + +   +    + L++D++++  P WSP G+ ++FS  ++G     LY++
Sbjct: 459 LSVMYNSKKDLYLYSFEDKVLKPLIDDNHIEVFPVWSPDGKYVVFSSDRNGRF--NLYAL 516

Query: 422 DLNGRNETLIN 432
           D+  +N   I 
Sbjct: 517 DMVTKNLYRIT 527



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 89/217 (41%), Gaps = 11/217 (5%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + + L  ++  V   + N   +   D    R +  +R +  + P F  +   + Y T D 
Sbjct: 360 DGKKLVYAKQDVYKKVYNYYDLYMYDFTTDREIRLTRGERAYAPVF-KDNNTIIYLTQD- 417

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           + I  +  +D +  +    +    S   +    S +G +A++SV  +   D+Y    +  
Sbjct: 418 KGITSIKKIDLKTRQTSTILKGNSSFSFSSLDISPDGNKAVLSVMYNSKKDLYLYSFEDK 477

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             + L +   I +   +SPD   +VF SDR G+  LY +     +  RI+     + F  
Sbjct: 478 VLKPLIDDNHIEVFPVWSPDGKYVVFSSDRNGRFNLYALDMVTKNLYRIT-----NLFTG 532

Query: 353 VWSP---QGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + P     D I F  +S + + +  ++ D  + + +
Sbjct: 533 AFKPSFRNKDEIVFVGYSLDGYDLYSVRLDRVEWKRV 569


>gi|294627159|ref|ZP_06705747.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598592|gb|EFF42741.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 779

 Score =  119 bits (299), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 13/232 (5%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               +  +       P  SP+   VAYA+   +      L+ T  +  P+ +      + 
Sbjct: 216 RPYQVITAGGGFDLTPSLSPDGAMVAYASLTRDRAGTSILVKTTDNAYPRVLETPGPGVS 275

Query: 262 A--PRFSSNGKRALISVQK-DEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQI 316
              P +S +G++   S Q  D +  +        A  R  +       +S S+SPD   +
Sbjct: 276 DRLPAWSPDGRQIAFSRQAPDGSCWVMIAAATGPAASREVVRCDGADMLSFSWSPDGRAL 335

Query: 317 VFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFA 372
           VF S     G  ++  +       + +    +A  FD  P +SP G+ I F + + +   
Sbjct: 336 VFGSMTGTHGAARMRRLDLATRQWQALDYPAQAGDFDYAPRYSPDGNWIVFLR-NPQLGD 394

Query: 373 IGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +  +  +G   ERL  ++++++  +W P G  LIF R+ D +  ++LY +DL
Sbjct: 395 LWRIPAEGGVAERLTHDNADIRGWSWLPDGSGLIFGRRVDSE--ARLYRLDL 444



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 54/315 (17%), Positives = 99/315 (31%), Gaps = 56/315 (17%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           S+       S+ V   D A  R L TP        P +SP+ +++A++    +    V +
Sbjct: 244 SLTRDRAGTSILVKTTDNAYPRVLETPGPGVSDRLPAWSPDGRQIAFSRQAPDGSCWVMI 303

Query: 242 MDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERL- 297
                  A + +       + +  +S +G+  +         A  +  +DL +   + L 
Sbjct: 304 AAATGPAASREVVRCDGADMLSFSWSPDGRALVFGSMTGTHGAARMRRLDLATRQWQALD 363

Query: 298 --TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                   + +  YSPD + IVF  + +    L+ + + G   +R++ D  A      W 
Sbjct: 364 YPAQAGDFDYAPRYSPDGNWIVFLRNPQ-LGDLWRIPAEGGVAERLTHD-NADIRGWSWL 421

Query: 356 PQGDLIAFTKFSGEKFAIGVMKK------------------------------------- 378
           P G  + F +    +  +  +                                       
Sbjct: 422 PDGSGLIFGRRVDSEARLYRLDLRDHSLHDVGVDDAQAPDVAHGHLVFVQRKPQFGVYQV 481

Query: 379 -----DGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
                +G   + RL         P  +P GR LIF+  + G  G     +   G    LI
Sbjct: 482 IGDTMNGGYIRRRLFPSSGRDDQPMIAPDGRQLIFASNRSGAYGLWWGDVSKPGS-VRLI 540

Query: 432 NT--PAYASDPQWVG 444
               P       W  
Sbjct: 541 EGLRPDSRQAGDWSA 555



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 74/176 (42%), Gaps = 21/176 (11%)

Query: 292 NATER----LTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQD 344
            + +R    +T     +++ S SPD + + + S   DR G   L     N   +   +  
Sbjct: 212 GSPKRPYQVITAGGGFDLTPSLSPDGAMVAYASLTRDRAGTSILVKTTDNAYPRVLETPG 271

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS----QERLLVEDSNLQAPTWSPS 400
              S   P WSP G  IAF++ + +     ++         +E +  + +++ + +WSP 
Sbjct: 272 PGVSDRLPAWSPDGRQIAFSRQAPDGSCWVMIAAATGPAASREVVRCDGADMLSFSWSPD 331

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA----------YASDPQWVGFM 446
           GR+L+F         +++  +DL  R    ++ PA          Y+ D  W+ F+
Sbjct: 332 GRALVFGSMTGTHGAARMRRLDLATRQWQALDYPAQAGDFDYAPRYSPDGNWIVFL 387



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 76/256 (29%), Gaps = 52/256 (20%)

Query: 213 ILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             + PR+SP+   + +       D+ R+           +R+ +  + I    +  +G  
Sbjct: 371 FDYAPRYSPDGNWIVFLRNPQLGDLWRI----PAEGGVAERLTHDNADIRGWSWLPDGSG 426

Query: 272 ALISVQKDEAMDIYSVDLQ----------------------------------------- 290
            +   + D    +Y +DL+                                         
Sbjct: 427 LIFGRRVDSEARLYRLDLRDHSLHDVGVDDAQAPDVAHGHLVFVQRKPQFGVYQVIGDTM 486

Query: 291 --SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEA 347
                  RL  +   +     +PD  Q++F S+R G   L+    +     R+ +  +  
Sbjct: 487 NGGYIRRRLFPSSGRDDQPMIAPDGRQLIFASNRSGAYGLWWGDVSKPGSVRLIEGLRPD 546

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSL 404
           S     WS     +  +      +A    V    G   RL V           P   R L
Sbjct: 547 SRQAGDWSADSQRVLVSGSDAAGYAALFEVTPGSGQVVRLPVPQPRPLQAIHLPDPDRLL 606

Query: 405 IFSRKKDGDTGSKLYS 420
           + +   DG T + LY 
Sbjct: 607 VLAAADDGHTFATLYD 622


>gi|294673806|ref|YP_003574422.1| mucin-desulfating sulfatase [Prevotella ruminicola 23]
 gi|294473896|gb|ADE83285.1| mucin-desulfating sulfatase [Prevotella ruminicola 23]
          Length = 1071

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 72/199 (36%), Gaps = 30/199 (15%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK    + + D    +Y+V        +LT     +    +SPD +++ F S RE
Sbjct: 32  AISPDGKTIAFAYKGD----VYTVAASGGKARQLTTNAAYDACPVWSPDGTKLAFASSRE 87

Query: 324 GKEQLYVMQSNGSDQKRIS-----------QDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           G   +YVM + GS+  R++           +  E   F   W P    I F      +  
Sbjct: 88  GSMDVYVMDAQGSEPVRLTTNSTDEMPMVWRGNEHVLFSASWMPSAQSILF----PGENQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLYSIDL 423
           +  +   G + R+      ++  +++  GR L          F +         ++ +  
Sbjct: 144 VYEVSIKGGRPRMFSTLP-MEDISFAKDGRILYHDYKGYEDPFRKHHQSPICRDIWMM-Q 201

Query: 424 NGRNETLINTPAYASDPQW 442
           +G    L +       P+W
Sbjct: 202 DGHYTRLTDFKGEDRTPRW 220



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 64/302 (21%), Positives = 120/302 (39%), Gaps = 40/302 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y   + E G FN   ++      +G  + S   M+     +RYL+ S +  L    +S N
Sbjct: 226 YYYTSEEDGTFN---VYRRNIDGTGKKQLSHHTMNP----VRYLSVSNEGTLC---YSQN 275

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +        +   ++V +   R D+   R       +     S  GK     ++ D   
Sbjct: 276 GEIYTLKEGSEPQKVKVTITGDRQDKDLIRQLRSSG-VTEISLSPEGKEVAFILRGD--- 331

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--- 339
            I+   ++   T+++TNT     S ++SPD   +V+ ++R G  Q+Y  +    ++K   
Sbjct: 332 -IFVTSVEYKTTKQITNTPQQERSVNFSPDGRSLVYCAERGGVWQIYQTKLKNKNEKLFT 390

Query: 340 --------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                   R++Q  E S   P +SP G  +A+ K       + V+      ER +++   
Sbjct: 391 YATSLQEERLTQSNETSL-QPQYSPDGKEVAYFKNRA---ELCVINLKTGLERTVLDGKY 446

Query: 392 LQAPT-------WSPSGRSLIFSRKKDGDTGSK-LYSIDLNGRNETLINTPAYASDPQ-- 441
             + +       WSP  + L+ S    G   S  +  I+ +G +E    T +  ++    
Sbjct: 447 NYSYSDGDIWFEWSPDSKWLLASYIGTGGWNSNDIALINASGNSEVHNLTESGYNEGAAR 506

Query: 442 WV 443
           WV
Sbjct: 507 WV 508



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 90/235 (38%), Gaps = 40/235 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + +A+A     D+  V           +++    +    P +S +G +   +  
Sbjct: 32  AISPDGKTIAFAY--KGDVYTV----AASGGKARQLTTNAAYDACPVWSPDGTKLAFASS 85

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI------------SASYSPDSSQIVFESDREGK 325
           ++ +MD+Y +D Q +   RLT      +            SAS+ P +  I+F     G+
Sbjct: 86  REGSMDVYVMDAQGSEPVRLTTNSTDEMPMVWRGNEHVLFSASWMPSAQSILF----PGE 141

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFA----------I 373
            Q+Y +   G   +  S        D  ++  G  I +  + G  + F           I
Sbjct: 142 NQVYEVSIKGGRPRMFSTLP---MEDISFAKDGR-ILYHDYKGYEDPFRKHHQSPICRDI 197

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +M+ DG   RL       + P W+    S  ++ ++DG       +ID  G+ +
Sbjct: 198 WMMQ-DGHYTRLTDFKGEDRTPRWA-DANSYYYTSEEDGTFNVYRRNIDGTGKKQ 250



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 55/393 (13%), Positives = 115/393 (29%), Gaps = 131/393 (33%)

Query: 165 SITGEKGDFNSRILFVSESVVS--GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           S+  E+G    R   +S    +     K  +  +   G   R LT +       P +SP+
Sbjct: 18  SVHAEEGPLWMRYTAISPDGKTIAFAYKGDVYTVAASGGKARQLTTNAAYDAC-PVWSPD 76

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--------FRSMI---LAPRFSSNGKR 271
             K+A+A+  +   + VY+MD +     +   N        +R       +  +  + + 
Sbjct: 77  GTKLAFASSREGS-MDVYVMDAQGSEPVRLTTNSTDEMPMVWRGNEHVLFSASWMPSAQS 135

Query: 272 ALISVQKDEAMDIYSVDLQSNATE------------------------------------ 295
            L          +Y V ++                                         
Sbjct: 136 ILF----PGENQVYEVSIKGGRPRMFSTLPMEDISFAKDGRILYHDYKGYEDPFRKHHQS 191

Query: 296 ---------------RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
                          RLT+    + +  ++ D++   + S+ +G   +Y    +G+ +K+
Sbjct: 192 PICRDIWMMQDGHYTRLTDFKGEDRTPRWA-DANSYYYTSEEDGTFNVYRRNIDGTGKKQ 250

Query: 341 IS-----------------------------------------------------QDKEA 347
           +S                                                     Q + +
Sbjct: 251 LSHHTMNPVRYLSVSNEGTLCYSQNGEIYTLKEGSEPQKVKVTITGDRQDKDLIRQLRSS 310

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIF 406
              +   SP+G  +AF         I V   +    + +      + +  +SP GRSL++
Sbjct: 311 GVTEISLSPEGKEVAFILRGD----IFVTSVEYKTTKQITNTPQQERSVNFSPDGRSLVY 366

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
             ++ G    ++Y   L  +NE L        +
Sbjct: 367 CAERGG--VWQIYQTKLKNKNEKLFTYATSLQE 397



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 52/127 (40%), Gaps = 13/127 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-----NFRSMIL 261
               ++   +P++SP+ ++VAY     ++   + +++ +       +      ++    +
Sbjct: 400 LTQSNETSLQPQYSPDGKEVAY----FKNRAELCVINLKTGLERTVLDGKYNYSYSDGDI 455

Query: 262 APRFSSNGKRALISVQKDEAM---DIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIV 317
              +S + K  L S          DI  ++   N+    LT + +   +A +      ++
Sbjct: 456 WFEWSPDSKWLLASYIGTGGWNSNDIALINASGNSEVHNLTESGYNEGAARWVLGGKAML 515

Query: 318 FESDREG 324
           FESDR G
Sbjct: 516 FESDRAG 522


>gi|75908403|ref|YP_322699.1| peptidase C14 [Anabaena variabilis ATCC 29413]
 gi|75702128|gb|ABA21804.1| Peptidase C14, caspase catalytic subunit p20 [Anabaena variabilis
            ATCC 29413]
          Length = 1240

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 70/367 (19%), Positives = 138/367 (37%), Gaps = 47/367 (12%)

Query: 60   ELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
            +L   +  VV  +L ++    +++  +  Q   +  +   F             G+ I  
Sbjct: 795  QLPANILTVVQNNLLQA--MAIVNLPNIIQGHESGVNSVAFSP----------DGQRIVS 842

Query: 120  GKDRLRVEFRLWDVKD---RKQIIG-----KKFFSSPASWR----------KIAHTISDD 161
            G     +  RLWDV      + +IG     K    SP   R          ++ +     
Sbjct: 843  GSGDKTL--RLWDVNGQPIGQPLIGHEGAVKSVAFSPDGQRIVSGSGDKTLRLWNVNGQP 900

Query: 162  IYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            I Q + G +G+  S       + +VSG   N+L + + +G  I       +  +    FS
Sbjct: 901  IGQPLIGHEGEVKSVAFSPDGQRIVSGSWDNTLRLWNVNGQPIGQPLIGHEGAVNSVAFS 960

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+ Q +   ++D+     + L D       + +    S + +  FS +G+R + S   D 
Sbjct: 961  PDGQCIVSGSWDN----TLRLWDVNGQPIGQPLIGHESGVYSVAFSPDGQRIV-SGSGDN 1015

Query: 281  AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             + ++ V+ QS   + L        S ++SPD  +IV  S       L +   NG    +
Sbjct: 1016 TLRLWDVNGQSIG-QPLIGHESGVYSVAFSPDGQRIVSGS---WDNTLRLWDVNGQSIGQ 1071

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSNLQAPTWS 398
                 E+  +   +SP G  I    +      + +   +G    + L+   + + +  +S
Sbjct: 1072 PLIGHESGVYSVAFSPDGQRIVSGSWDNT---LRLWDVNGQPIGQPLMGHKAAVISVAFS 1128

Query: 399  PSGRSLI 405
            P G+ ++
Sbjct: 1129 PDGQRIV 1135



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 75/190 (39%), Gaps = 24/190 (12%)

Query: 121  KDRLRVEFRLWDVKD---RKQIIGK-----KFFSSPASWRKIA------HTISDDIYQSI 166
                    RLWDV      + +IG          SP   R ++        + D   QSI
Sbjct: 968  SGSWDNTLRLWDVNGQPIGQPLIGHESGVYSVAFSPDGQRIVSGSGDNTLRLWDVNGQSI 1027

Query: 167  TGEKGDFNSRILFVS-----ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
                    S +  V+     + +VSG   N+L + D +G +I       +  ++   FSP
Sbjct: 1028 GQPLIGHESGVYSVAFSPDGQRIVSGSWDNTLRLWDVNGQSIGQPLIGHESGVYSVAFSP 1087

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + Q++   ++D+     + L D       + +   ++ +++  FS +G+R + S   D  
Sbjct: 1088 DGQRIVSGSWDN----TLRLWDVNGQPIGQPLMGHKAAVISVAFSPDGQRIV-SGSADNK 1142

Query: 282  MDIYSVDLQS 291
            + ++    QS
Sbjct: 1143 LKLWRGSWQS 1152



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 23/138 (16%)

Query: 116  VIKEGKDRLRVEFRLWDVKD---RKQIIGK-----KFFSSPASWRKIAHTISDDIY---- 163
            V   G + L    RLWDV      + +IG          SP   R ++ +  + +     
Sbjct: 1009 VSGSGDNTL----RLWDVNGQSIGQPLIGHESGVYSVAFSPDGQRIVSGSWDNTLRLWDV 1064

Query: 164  -------QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
                     I  E G ++       + +VSG   N+L + D +G  I          +  
Sbjct: 1065 NGQSIGQPLIGHESGVYSVAFSPDGQRIVSGSWDNTLRLWDVNGQPIGQPLMGHKAAVIS 1124

Query: 217  PRFSPNQQKVAYATYDDE 234
              FSP+ Q++   + D++
Sbjct: 1125 VAFSPDGQRIVSGSADNK 1142


>gi|116619729|ref|YP_821885.1| WD40 domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222891|gb|ABJ81600.1| WD40 domain protein beta Propeller [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 335

 Score =  119 bits (299), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 47/282 (16%), Positives = 100/282 (35%), Gaps = 53/282 (18%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD--- 232
           R++F +         + + +M+ DG++    +  + +      F  + + + Y +     
Sbjct: 45  RLIFQTTRPP--YDCDQIFLMNADGSDQHLASTGKGRTTCG-YFLADGKHIVYGSTHLAG 101

Query: 233 -----DEDILRVYLMDT----------RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
                  D  + Y+              I    KR+ N          +      + +  
Sbjct: 102 DACPVSPDRSKGYVWGVFAGYDIFEANDIGEIEKRLTNTPGYDAEATVNWKTNNIVYTSV 161

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----------- 326
               +D++++    +A +++T     +  A +S D  Q+V+   R G             
Sbjct: 162 ASGDLDLWTMKPDGSAKKQITKNPGYDGGAVFSRDGKQLVW---RAGYPKNDADMKRYKE 218

Query: 327 ------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEK 370
                       +L V  ++G+  ++I+    AS F P ++P G  I F          K
Sbjct: 219 LLAENLTAPMKMELMVSNADGTSARQITNFGCAS-FAPTFAPDGKKILFASNKAECDSRK 277

Query: 371 FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD 411
           F + ++  DG+    +         P +SP G++L+F   KD
Sbjct: 278 FELYLINVDGTGLEQVTNFGGFTSFPEFSPDGKTLVFCTDKD 319



 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 97/270 (35%), Gaps = 45/270 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-- 276
           +SP+ +++ + T           +              +       F ++GK  +     
Sbjct: 39  WSPDGKRLIFQTTRPPYDCDQIFLMNADGSDQHLASTGKGRTTCGYFLADGKHIVYGSTH 98

Query: 277 --------QKDE----------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                     D             DI+  +      +RLTNT   +  A+ +  ++ IV+
Sbjct: 99  LAGDACPVSPDRSKGYVWGVFAGYDIFEANDIGEIEKRLTNTPGYDAEATVNWKTNNIVY 158

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------------- 365
            S   G   L+ M+ +GS +K+I+++        V+S  G  + +               
Sbjct: 159 TSVASGDLDLWTMKPDGSAKKQITKN-PGYDGGAVFSRDGKQLVWRAGYPKNDADMKRYK 217

Query: 366 -------FSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKD--GDTG 415
                   +  K  + V   DG+  R +        APT++P G+ ++F+  K       
Sbjct: 218 ELLAENLTAPMKMELMVSNADGTSARQITNFGCASFAPTFAPDGKKILFASNKAECDSRK 277

Query: 416 SKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
            +LY I+++G   E + N   + S P++  
Sbjct: 278 FELYLINVDGTGLEQVTNFGGFTSFPEFSP 307



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 75/196 (38%), Gaps = 31/196 (15%)

Query: 161 DIYQSITGEKGDFNSRIL------FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           +I + +T   G      +       V  SV SG +   L  M  DG+  + +T       
Sbjct: 132 EIEKRLTNTPGYDAEATVNWKTNNIVYTSVASGDL--DLWTMKPDGSAKKQITK-NPGYD 188

Query: 215 FEPRFSPNQQKVAYATYDDEDILRV------------------YLMDTRIDRAPKRIGNF 256
               FS + +++ +     ++   +                   ++      + ++I NF
Sbjct: 189 GGAVFSRDGKQLVWRAGYPKNDADMKRYKELLAENLTAPMKMELMVSNADGTSARQITNF 248

Query: 257 RSMILAPRFSSNGKRALISVQK----DEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                AP F+ +GK+ L +  K        ++Y +++     E++TN         +SPD
Sbjct: 249 GCASFAPTFAPDGKKILFASNKAECDSRKFELYLINVDGTGLEQVTNFGGFTSFPEFSPD 308

Query: 313 SSQIVFESDREGKEQL 328
              +VF +D++ KE+ 
Sbjct: 309 GKTLVFCTDKDAKERY 324



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/239 (12%), Positives = 70/239 (29%), Gaps = 49/239 (20%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPD 312
                     +S +GKR +    +       I+ ++   +     +          +  D
Sbjct: 29  THGGQNAEAYWSPDGKRLIFQTTRPPYDCDQIFLMNADGSDQHLASTGKGRTTCGYFLAD 88

Query: 313 SSQIVFES------------DRE--------GKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              IV+ S            DR             ++     G  +KR++ +      + 
Sbjct: 89  GKHIVYGSTHLAGDACPVSPDRSKGYVWGVFAGYDIFEANDIGEIEKRLT-NTPGYDAEA 147

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
             + + + I +T  +     +  MK DGS ++ +           +S  G+ L++     
Sbjct: 148 TVNWKTNNIVYTSVASGDLDLWTMKPDGSAKKQITKNPGYDGGAVFSRDGKQLVWRAGYP 207

Query: 412 GDTGS------------------KLYSIDLNGRNETLINT-------PAYASDPQWVGF 445
            +                     +L   + +G +   I         P +A D + + F
Sbjct: 208 KNDADMKRYKELLAENLTAPMKMELMVSNADGTSARQITNFGCASFAPTFAPDGKKILF 266



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 66/170 (38%), Gaps = 32/170 (18%)

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDP 352
           ++LT+    N  A +SPD  +++F++ R     +Q+++M ++GSD + ++   +      
Sbjct: 26  KQLTHG-GQNAEAYWSPDGKRLIFQTTRPPYDCDQIFLMNADGSD-QHLASTGKGRTTCG 83

Query: 353 VWSPQGDLIAF--TKFSGE------------------KFAIGVMKKDGSQERLLVEDSNL 392
            +   G  I +  T  +G+                   + I      G  E+ L      
Sbjct: 84  YFLADGKHIVYGSTHLAGDACPVSPDRSKGYVWGVFAGYDIFEANDIGEIEKRLTNTPGY 143

Query: 393 QAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYAS 438
            A     W  +   ++++    GD    L+++  +G   + +   P Y  
Sbjct: 144 DAEATVNWKTNN--IVYTSVASGD--LDLWTMKPDGSAKKQITKNPGYDG 189



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 24/54 (44%)

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           S  + L          WSP G+ LIF   +      +++ ++ +G ++ L +T 
Sbjct: 23  SDYKQLTHGGQNAEAYWSPDGKRLIFQTTRPPYDCDQIFLMNADGSDQHLASTG 76


>gi|170693891|ref|ZP_02885048.1| hypothetical protein BgramDRAFT_3858 [Burkholderia graminis C4D1M]
 gi|170141309|gb|EDT09480.1| hypothetical protein BgramDRAFT_3858 [Burkholderia graminis C4D1M]
          Length = 642

 Score =  119 bits (299), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 99/256 (38%), Gaps = 44/256 (17%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD--IYSVDL 289
               +     +        +++           FS +G+  + + ++D A    +Y V +
Sbjct: 45  RVGPVSSELYISNADGTGERKLIPSTGFDYHASFSKDGQWLVFTSERDGAGQSNLYRVKV 104

Query: 290 QSNATERLTNTLFINISASYSP-DSSQIVFESDREGKE-----QLYVMQSNGSDQKRIS- 342
                ERLT+ + ++ +A +SP D + I F S R G +      ++ +  +      ++ 
Sbjct: 105 DGTGLERLTDHIAVDDAAVFSPTDPNVIAFVSSRRGNDGFGTTNVWTLNLSTGALNNVTG 164

Query: 343 -----QDKEASYFDPVWSPQGDLIAFTKFSGEKFA---------------IGVMKKDGSQ 382
                  +   YF P WSP G  +A +  +G  +                I +++ DGS 
Sbjct: 165 SLGFDPTRPHGYFRPSWSPDGKWLALSSDTGSDWRGHNLPTGWERTQESSIYIVRPDGSG 224

Query: 383 ERLL--VEDSNLQAPTWSPSGRSLIFSRK------------KDGDTGSKLYSIDLNG-RN 427
            + +  V   +  +P+WSP G+ ++F                     S+L S+D+     
Sbjct: 225 WKKIAGVSGYDEGSPSWSPDGKRVVFYETPVESTWGAHRPESINSVSSQLVSVDITSLSR 284

Query: 428 ETLINTPAYASDPQWV 443
            TL +T  +   PQ++
Sbjct: 285 TTLTSTAGFKVFPQYL 300



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 44/275 (16%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDT----------RIDRAPKRIGNFRSMIL 261
            +   P+ S ++ K+ Y        + V   +                P  I    +   
Sbjct: 372 YLDVFPQLSRDRAKLVYTEKAINSSIAVANPNLSGYTRIYDPATSGLDPAAIAQGLAGAF 431

Query: 262 APRFSSNGKRALISV------QKDEAMDIYSVDLQS---NATERLTNTLFINISASYSPD 312
            P +S + +     V      +      I  +          E LT+    +   SYSPD
Sbjct: 432 QPAWSPDRQWVAFGVGNWFFTRSTGPAQIMRIRADGSMNGQAEALTDGSINSGFPSYSPD 491

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--- 369
             ++V+    +  + L ++         ++     +   P WSP G  I FT+   +   
Sbjct: 492 GKKLVYRVWSDAVQGLRILDLATRSTTVLT---SGADNLPGWSPDGSRIVFTRKQIDATN 548

Query: 370 ----KFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDG------------ 412
                + +  ++ DG+   RL  + SN     W+  GR + +S    G            
Sbjct: 549 PNRFNYDVFTIRPDGTGLTRLTTDGSNQGHAVWTWDGR-IAYSSGTYGFRDELALYDNSF 607

Query: 413 DTGSKLYSIDLNGRNETLINTPAY-ASDPQWVGFM 446
               + + ++ +G N+  I    +  + P ++  +
Sbjct: 608 QPDGQNWVMNADGSNQRPITDTLWEEAMPLYIPTL 642



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 75/205 (36%), Gaps = 29/205 (14%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G + + L + + DG   R L PS     +   FS + Q + + +  D             
Sbjct: 47  GPVSSELYISNADGTGERKLIPST-GFDYHASFSKDGQWLVFTSERDGAGQSNLYRVKVD 105

Query: 247 DRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA-----MDIYSVDLQSNATERLTNT 300
               +R+ +  ++  A  FS  +         +         ++++++L + A   +T +
Sbjct: 106 GTGLERLTDHIAVDDAAVFSPTDPNVIAFVSSRRGNDGFGTTNVWTLNLSTGALNNVTGS 165

Query: 301 LFIN-------ISASYSPDSSQIVFESD---------------REGKEQLYVMQSNGSDQ 338
           L  +          S+SPD   +   SD               R  +  +Y+++ +GS  
Sbjct: 166 LGFDPTRPHGYFRPSWSPDGKWLALSSDTGSDWRGHNLPTGWERTQESSIYIVRPDGSGW 225

Query: 339 KRISQDKEASYFDPVWSPQGDLIAF 363
           K+I+         P WSP G  + F
Sbjct: 226 KKIAGVSGYDEGSPSWSPDGKRVVF 250



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 68/195 (34%), Gaps = 32/195 (16%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQ 338
           + ++Y  +       +L  +   +  AS+S D   +VF S+R+G  Q  LY ++ +G+  
Sbjct: 50  SSELYISNADGTGERKLIPSTGFDYHASFSKDGQWLVFTSERDGAGQSNLYRVKVDGTGL 109

Query: 339 KRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF-----AIGVMKKDGSQERLLVEDSNL 392
           +R++ D  A     V+SP   ++IAF              +  +         +      
Sbjct: 110 ERLT-DHIAVDDAAVFSPTDPNVIAFVSSRRGNDGFGTTNVWTLNLSTGALNNVTGSLGF 168

Query: 393 Q--------APTWSPSGRSLIFSRKKDGDT-------------GSKLYSIDLNGRNETLI 431
                     P+WSP G+ L  S     D               S +Y +  +G     I
Sbjct: 169 DPTRPHGYFRPSWSPDGKWLALSSDTGSDWRGHNLPTGWERTQESSIYIVRPDGSGWKKI 228

Query: 432 N--TPAYASDPQWVG 444
              +      P W  
Sbjct: 229 AGVSGYDEGSPSWSP 243



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 84/244 (34%), Gaps = 30/244 (12%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PR+SP+  K+ Y                  D A K I     + + P+ S +  + + + 
Sbjct: 335 PRYSPDGTKLVYEKVAFSPARANGTPLFSFDPAWKYI----YLDVFPQLSRDRAKLVYTE 390

Query: 277 QK------------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----- 319
           +                  IY           +   L      ++SPD   + F      
Sbjct: 391 KAINSSIAVANPNLSGYTRIYDPATSGLDPAAIAQGLAGAFQPAWSPDRQWVAFGVGNWF 450

Query: 320 -SDREGKEQLYVMQSNGS--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            +   G  Q+  ++++GS   Q     D   +   P +SP G  + +  +S     + ++
Sbjct: 451 FTRSTGPAQIMRIRADGSMNGQAEALTDGSINSGFPSYSPDGKKLVYRVWSDAVQGLRIL 510

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK-----DGDTGSKLYSIDLNGRNETLI 431
                   +L   ++   P WSP G  ++F+RK+            +++I  +G   T +
Sbjct: 511 DLATRSTTVLTSGAD-NLPGWSPDGSRIVFTRKQIDATNPNRFNYDVFTIRPDGTGLTRL 569

Query: 432 NTPA 435
            T  
Sbjct: 570 TTDG 573



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/346 (15%), Positives = 113/346 (32%), Gaps = 92/346 (26%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +      ++S+ ++  DG+  + +          P +SP+ ++V +     E     + 
Sbjct: 204 PTGWERTQESSIYIVRPDGSGWKKIAGVSGYDEGSPSWSPDGKRVVFYETPVESTWGAHR 263

Query: 242 MDTRIDRAPKRI------------------------------------------------ 253
            ++    + + +                                                
Sbjct: 264 PESINSVSSQLVSVDITSLSRTTLTSTAGFKVFPQYLNAATVAYHVKGGSTEGLYTTAGT 323

Query: 254 --GNFRSMILAPRFSSNGKRA-----LISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                 + I +PR+S +G +        S  +     ++S D            +++++ 
Sbjct: 324 FHSTANTGIRSPRYSPDGTKLVYEKVAFSPARANGTPLFSFDPAWK-------YIYLDVF 376

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD------------KEASYFDPVW 354
              S D +++V+  ++     + V   N S   RI                 A  F P W
Sbjct: 377 PQLSRDRAKLVYT-EKAINSSIAVANPNLSGYTRIYDPATSGLDPAAIAQGLAGAFQPAW 435

Query: 355 SPQGDLIAFT------KFSGEKFAIGVMKKDG---SQERLLVEDS-NLQAPTWSPSGRSL 404
           SP    +AF         S     I  ++ DG    Q   L + S N   P++SP G+ L
Sbjct: 436 SPDRQWVAFGVGNWFFTRSTGPAQIMRIRADGSMNGQAEALTDGSINSGFPSYSPDGKKL 495

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINT-----PAYASDPQWVGF 445
           ++    D   G ++  +DL  R+ T++ +     P ++ D   + F
Sbjct: 496 VYRVWSDAVQGLRI--LDLATRSTTVLTSGADNLPGWSPDGSRIVF 539



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +P+G L    +       + +   DG+ ER L+         ++S  G+ L+F+ ++DG 
Sbjct: 36  APKGTLFL-NRVGPVSSELYISNADGTGERKLIPSTGFDYHASFSKDGQWLVFTSERDGA 94

Query: 414 TGSKLYSIDLNGRNETLIN 432
             S LY + ++G     + 
Sbjct: 95  GQSNLYRVKVDGTGLERLT 113


>gi|21229189|ref|NP_635111.1| hypothetical protein MM_3087 [Methanosarcina mazei Go1]
 gi|20907756|gb|AAM32783.1| hypothetical protein MM_3087 [Methanosarcina mazei Go1]
          Length = 413

 Score =  119 bits (298), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 95/245 (38%), Gaps = 6/245 (2%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                  +    P +S + + + Y    +  +  + Y M        +      ++    
Sbjct: 43  TFLTDSPEKELSPVWSADGEYIFYTVEGNGSNDFKSYRMKANGSEIKRTGIGEGNLTGFS 102

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDR 322
             S +G+  +I       +D+Y  +L++     + +   I     S+     +I +  + 
Sbjct: 103 DLSLDGRDLVIIKSMGSQLDLYLANLENGTVTPVASDSQISEGWGSWCRFGKKITYTQES 162

Query: 323 EG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDG 380
            G   QL+++  +G+++ R+   +        W P G  + ++      K+ + V+   G
Sbjct: 163 AGMPPQLWIIDRDGNNRARLGTSENVG-TGKDWCPLGLRVIYSSKDSQGKYDLWVIDYHG 221

Query: 381 SQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           + +  L   S N   P++SP+G+ + +   + G     L  I+ N R+    NT  Y S 
Sbjct: 222 TNQTQLTNTSYNEWNPSFSPNGKWIAYVSDEGGSPDIWLRDIEGNYRSRLTNNTGRYDSI 281

Query: 440 PQWVG 444
           P+W  
Sbjct: 282 PRWSP 286



 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 96/270 (35%), Gaps = 17/270 (6%)

Query: 159 SDDIYQSIT----------GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           +DD  + +T                +   +F +    +G        M  +G+ I+    
Sbjct: 35  ADDFVEDVTFLTDSPEKELSPVWSADGEYIFYTVEG-NGSNDFKSYRMKANGSEIKRTGI 93

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
               +      S + + +          L +YL +           + +       +   
Sbjct: 94  GEGNLTGFSDLSLDGRDLVIIK-SMGSQLDLYLANLENGTVTPVASDSQISEGWGSWCRF 152

Query: 269 GKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKE 326
           GK+   +         ++ +D   N   RL  +  +     + P   ++++ S D +GK 
Sbjct: 153 GKKITYTQESAGMPPQLWIIDRDGNNRARLGTSENVGTGKDWCPLGLRVIYSSKDSQGKY 212

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            L+V+  +G++Q +++ +   + ++P +SP G  IA+    G    I +   +G+    L
Sbjct: 213 DLWVIDYHGTNQTQLT-NTSYNEWNPSFSPNGKWIAYVSDEGGSPDIWLRDIEGNYRSRL 271

Query: 387 V--EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                     P WSP G  ++F     G+ 
Sbjct: 272 TNNTGRYDSIPRWSPEGSKIMFEGYNPGNN 301



 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 73/183 (39%), Gaps = 2/183 (1%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L + + +   +  +            +    +K+ Y         +++++D R      
Sbjct: 122 DLYLANLENGTVTPVASDSQISEGWGSWCRFGKKITYTQESAGMPPQLWIID-RDGNNRA 180

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYS 310
           R+G   ++     +   G R + S +      D++ +D       +LTNT +   + S+S
Sbjct: 181 RLGTSENVGTGKDWCPLGLRVIYSSKDSQGKYDLWVIDYHGTNQTQLTNTSYNEWNPSFS 240

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P+   I + SD  G   +++    G+ + R++ +       P WSP+G  I F  ++   
Sbjct: 241 PNGKWIAYVSDEGGSPDIWLRDIEGNYRSRLTNNTGRYDSIPRWSPEGSKIMFEGYNPGN 300

Query: 371 FAI 373
            +I
Sbjct: 301 NSI 303



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 36/95 (37%), Gaps = 6/95 (6%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I +VS+   S      + + D +G     LT +  +    PR+SP   K+ +  Y+  + 
Sbjct: 246 IAYVSDEGGSP----DIWLRDIEGNYRSRLTNNTGRYDSIPRWSPEGSKIMFEGYNPGNN 301

Query: 237 LRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGK 270
               ++       P   + N     L     ++GK
Sbjct: 302 SISDIITAETINYPDSSVSNITGSNLDGSV-TDGK 335


>gi|85710926|ref|ZP_01041987.1| putative exported peptidase [Idiomarina baltica OS145]
 gi|85695330|gb|EAQ33267.1| putative exported peptidase [Idiomarina baltica OS145]
          Length = 1068

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 69/201 (34%), Gaps = 20/201 (9%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           R +I+ P  S +G +   S Q D    I+++        RLT       S  +S D   I
Sbjct: 25  RPLIMQPEISPDGTQIAFSYQGD----IWTMSTSGTHPNRLTIHEGYESSPKWSKDGKTI 80

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----GEKF 371
            F SDR G + ++VM S G    R++    A      +    + + F           ++
Sbjct: 81  AFSSDRFGNDDVFVMPSQGGRPDRLTY-HSAPDRVLGFGHD-NQVLFNTRRLYAEVEREW 138

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR--------KKDGDTGSKLYSIDL 423
            +  +   G        D+       SP G+ + F R           G     ++  D 
Sbjct: 139 EVYGVAPSGDATEARFMDALGFDAVVSPDGKKIAFVRGTCRISREDYRGPANRNIWIYDT 198

Query: 424 -NGRNETLINTPAYASDPQWV 443
             G  E L +       PQW 
Sbjct: 199 ETGEYEQLTDFDGNDFMPQWS 219



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 78/219 (35%), Gaps = 26/219 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN + ++Y    D  + R    + + D+   R+ +  +      +  +    L    
Sbjct: 314 SVSPNGKLISYVVRGDVFVKR----NDKEDKRSVRLTSGAARDRDVAW-LDDNTVLFISD 368

Query: 278 KDEAMDIYSVDLQSNATERL-----------TNTLFINISASYSPDSSQIVFESDREGKE 326
           +D   DI++V    +    L           T T         SPD  ++ +   REG+ 
Sbjct: 369 RDGQNDIFAVTSADSEEPNLFRSLKHSVKPVTRTDAEEHEPLVSPDGKKVAY---REGRG 425

Query: 327 QLYVMQSNGSDQ---KRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQ 382
           +L V             +  D  A+     WSP    +A+ K        I +   D SQ
Sbjct: 426 KLIVTDVADDQSLTNPVVLLDGWATPSGVSWSPDSQWLAYAKSDLSFNSEIFIHAADNSQ 485

Query: 383 ERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           E + V        +P WSP G  L FS  ++ +    ++
Sbjct: 486 EPVNVSMHPKGDYSPAWSPDGSKLGFSSMRN-NGDYDIW 523



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 48/355 (13%), Positives = 113/355 (31%), Gaps = 98/355 (27%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E+       +    + ++   +  +  M   G +   LT   +     P++S + + +A
Sbjct: 23  PERPLIMQPEISPDGTQIAFSYQGDIWTMSTSGTHPNRLTI-HEGYESSPKWSKDGKTIA 81

Query: 228 YATYDDEDILRVYLMDTRIDRA--------PKRIGNFR---------------------- 257
           +++    +   V++M ++  R         P R+  F                       
Sbjct: 82  FSSDRFGN-DDVFVMPSQGGRPDRLTYHSAPDRVLGFGHDNQVLFNTRRLYAEVEREWEV 140

Query: 258 ------SMILAPRF----------SSNGKRALIS----------VQKDEAMDIYSVDLQS 291
                       RF          S +GK+               +     +I+  D ++
Sbjct: 141 YGVAPSGDATEARFMDALGFDAVVSPDGKKIAFVRGTCRISREDYRGPANRNIWIYDTET 200

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              E+LT+    +    +S + +++ F S R GK  ++  +   +  ++I+ ++E     
Sbjct: 201 GEYEQLTDFDGNDFMPQWSSN-NELYFISSRAGKYNVFRQKLGSNRAEQITDEREFGVEH 259

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----------------VEDSNLQAP 395
                Q + + +           V    GS+ + L                   + L   
Sbjct: 260 FSIDKQANHLVYQAADK------VQLIAGSKRQSLDLSIPTDFRFDPVTNKSTTNALDEY 313

Query: 396 TWSPSGRSL-------IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           + SP+G+ +       +F ++ D +          + R+  L +  A   D  W+
Sbjct: 314 SVSPNGKLISYVVRGDVFVKRNDKE----------DKRSVRLTSGAARDRDVAWL 358



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 94/271 (34%), Gaps = 34/271 (12%)

Query: 193 LCVMDRDGANIRYLTPSRDQIL---------------------FEPRFSPNQQKVAYATY 231
           L + DRDG N  +   S D                         EP  SP+ +KVAY   
Sbjct: 364 LFISDRDGQNDIFAVTSADSEEPNLFRSLKHSVKPVTRTDAEEHEPLVSPDGKKVAY-RE 422

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---VQKDEAMDIYSVD 288
               ++   + D +    P  + +  +      +S + +    +   +  +  + I++ D
Sbjct: 423 GRGKLIVTDVADDQSLTNPVVLLDGWATPSGVSWSPDSQWLAYAKSDLSFNSEIFIHAAD 482

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEA 347
             S     ++     + S ++SPD S++ F S R  G   ++      SD +R  ++ + 
Sbjct: 483 -NSQEPVNVSMHPKGDYSPAWSPDGSKLGFSSMRNNGDYDIWFAWLKESDWQRSQEEWKR 541

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSL 404
             F    +   +    +  + +      +  DG      ++     N     +   G  +
Sbjct: 542 DEFVEETADAKESEDDSDAAEDAVEPMQIDLDGIYKRLVQVTRFAGNESGLAFDKEGEHV 601

Query: 405 IFSRKKDGDTGSK----LYSIDLNGRNETLI 431
            ++    G    +    L+ I  NG ++  I
Sbjct: 602 YYTIGGAGRQNFEMDQDLFKIKWNGEDKEHI 632



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 20/187 (10%), Positives = 63/187 (33%), Gaps = 19/187 (10%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              + + +   D +          +  + P +SP+  K+ +++  +     ++    +  
Sbjct: 471 SFNSEIFIHAADNSQEPVNVSMHPKGDYSPAWSPDGSKLGFSSMRNNGDYDIWFAWLKES 530

Query: 248 RAPKRIGNFRSMIL-----APRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNT 300
              +    ++           + S +   A      ++A++   +DL        ++T  
Sbjct: 531 DWQRSQEEWKRDEFVEETADAKESEDDSDAA-----EDAVEPMQIDLDGIYKRLVQVTRF 585

Query: 301 LFINISASYSPDSSQIVFESDREGKEQ------LYVMQSNGSDQKRISQDKEASYFDPVW 354
                  ++  +   + +     G++       L+ ++ NG D++ I +  + S      
Sbjct: 586 AGNESGLAFDKEGEHVYYTIGGAGRQNFEMDQDLFKIKWNGEDKEHIIK-GDQSPRSLSL 644

Query: 355 SPQGDLI 361
           S  G  +
Sbjct: 645 STDGKSL 651


>gi|302530195|ref|ZP_07282537.1| predicted protein [Streptomyces sp. AA4]
 gi|302439090|gb|EFL10906.1| predicted protein [Streptomyces sp. AA4]
          Length = 1102

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 85/215 (39%), Gaps = 46/215 (21%)

Query: 263 PRFSSNGKRALISVQ-----KDEAMD-IYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P  S +G R    V+     +D  +D +++V   S    +LT     + +  +SPD S++
Sbjct: 19  PALSPDGSRIAYVVRTADREEDRNVDALWTVGASSGEARQLTRGNA-DAAPKWSPDGSRL 77

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----------- 365
            F   ++G  Q++V+ ++G + +++++    +   PVWSP G  IAF+            
Sbjct: 78  AFLRAQDGPPQVWVLPADGGEAEQLTKLPLGA-GAPVWSPDGSKIAFSSAIDLAAVVEAP 136

Query: 366 --------------------FSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSL 404
                                   +  + V+     + +     D +   P WSP G  +
Sbjct: 137 PENTPIVAERLDYKSDGPGLLKTLRSHVHVLDVATGEVQQHTFGDWHAGQPAWSPDGTHV 196

Query: 405 IFSRKKDGDTG----SKLYSIDLNGRNE--TLINT 433
            F+   D D      S  Y +D+  RN    L+ T
Sbjct: 197 AFTAALDDDADLTFRSAAYVLDVTERNAEPRLVGT 231



 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 89/254 (35%), Gaps = 45/254 (17%)

Query: 216 EPRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +P  SP+  ++AY       +ED     L          R     +   AP++S +G R 
Sbjct: 18  QPALSPDGSRIAYVVRTADREEDRNVDALWTVGASSGEARQLTRGNADAAPKWSPDGSRL 77

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------------- 319
                +D    ++ +       E+LT       +  +SPD S+I F              
Sbjct: 78  AFLRAQDGPPQVWVLPADGGEAEQLTKLPLGAGAPVWSPDGSKIAFSSAIDLAAVVEAPP 137

Query: 320 -------------SDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                        SD  G     +  ++V+     + ++ +   +     P WSP G  +
Sbjct: 138 ENTPIVAERLDYKSDGPGLLKTLRSHVHVLDVATGEVQQHTF-GDWHAGQPAWSPDGTHV 196

Query: 362 AFTKFSGEKFAI------GVMKKD--GSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDG 412
           AFT    +   +       V+      ++ RL+  +        W+  G++L+   + D 
Sbjct: 197 AFTAALDDDADLTFRSAAYVLDVTERNAEPRLVGTDQGMAGTVGWTKDGKALLVVGRTDT 256

Query: 413 DTG-SKLYSIDLNG 425
            TG   L  + L+G
Sbjct: 257 ATGHLGLLRVPLDG 270



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 99/314 (31%), Gaps = 60/314 (19%)

Query: 175 SRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           SRI +V  +      +N  +L  +       R LT         P++SP+  ++A+    
Sbjct: 26  SRIAYVVRTADREEDRNVDALWTVGASSGEARQLTRGNADAA--PKWSPDGSRLAF--LR 81

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM---------- 282
            +D      +        +++        AP +S +G +   S   D A           
Sbjct: 82  AQDGPPQVWVLPADGGEAEQLTKLPLGAGAPVWSPDGSKIAFSSAIDLAAVVEAPPENTP 141

Query: 283 ---------------------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-- 319
                                 ++ +D+ +   ++ T   +     ++SPD + + F   
Sbjct: 142 IVAERLDYKSDGPGLLKTLRSHVHVLDVATGEVQQHTFGDWHAGQPAWSPDGTHVAFTAA 201

Query: 320 ----SDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSG---EKF 371
               +D   +   YV+     + + R+    +       W+  G  +     +       
Sbjct: 202 LDDDADLTFRSAAYVLDVTERNAEPRLVGTDQGMAGTVGWTKDGKALLVVGRTDTATGHL 261

Query: 372 AIGVMKKDGSQERLLVED-------SNLQAPTWSP----SGRSLIFSRKKDGDTGSKLYS 420
            +  +  DG +   L               P   P    +G  ++F+ +  G   + LY 
Sbjct: 262 GLLRVPLDGGETVDLAASLDRNVMPGGPGYPGALPQLTEAGDVVLFAIRDRG--CTHLYE 319

Query: 421 IDLNGRNETLINTP 434
           +DL G     + T 
Sbjct: 320 VDLAGGEPRAVLTG 333


>gi|265764805|ref|ZP_06093080.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263254189|gb|EEZ25623.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 1090

 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 75/220 (34%), Gaps = 34/220 (15%)

Query: 253 IGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +        +P +      S +G       + D    IY V        +LT       +
Sbjct: 12  LTTLTGNAASPLWMRDVQISPDGTEIAFCYKGD----IYKVSAGGGTAIQLTTQPSYECT 67

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPDS QI F SDR G   ++VM + G   +R++    +S     ++P G  I F+  
Sbjct: 68  PIWSPDSKQIAFASDRNGNFDIFVMPATGGTAQRLTT-HSSSELPSAFTPDGKYILFSAS 126

Query: 367 SGEKF-----------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF--------- 406
             +              +  +  +G +   ++     +A  ++PSG   ++         
Sbjct: 127 IQDPSQSALFPTTAMTELYKVPVNGGRTEQVLGTP-AEAVCYAPSGEFFLYQDRKGFEDE 185

Query: 407 -SRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
             +         ++  D   G++  L N      +P    
Sbjct: 186 WRKNHTSSITRDIWLYDTKTGKHTNLTNHAGEDRNPVLSP 225



 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 121/349 (34%), Gaps = 41/349 (11%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
              K     +  +  L+D K  K        +     R    +        ++  KG FN
Sbjct: 185 EWRKNHTSSITRDIWLYDTKTGKH---TNLTNHAGEDRNPVLSPDGKSVYLLSERKGSFN 241

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                   S      ++   V       +R+L+ S    L    ++ + +   Y   D+ 
Sbjct: 242 ------VYSFPLDNAQDLKAVTSFKTHPVRFLSMSHGGTLC---YAYDGE--IYTQKDNA 290

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              ++ +   R D+       F +   +   S +GK+    V+     +++        T
Sbjct: 291 TPQKINIDIVRDDQDKIADLTFTNGATSGTVSPDGKQIAFIVRG----EVFVTSTDYATT 346

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM-----------QSNGSDQKRISQ 343
           +++T+T       +++PD+  + + S+R G  QL++             +   +++ +  
Sbjct: 347 KQITHTPAREAGLTFAPDNRTLAYASERNGNWQLFLAKIARKEEANFPNATIIEEEVLLP 406

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTW 397
                   P +SP G  +AF +       + V+  D  + R + + S   +        W
Sbjct: 407 SATVERAYPQFSPDGKELAFIEERN---RLMVINLDTKKVRQITDGSTWFSTDGNFDYQW 463

Query: 398 SPSGRS--LIFSRKKDGD-TGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           SP G+   L F   +    +   L S   +     L N+   +  P+WV
Sbjct: 464 SPDGKWFTLEFIGNRHDPYSDIGLVSAKGDSPITNLTNSGYMSGSPRWV 512



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 80/230 (34%), Gaps = 35/230 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V    +       ++    S    P +S + K+   +  +
Sbjct: 30  ISPDGTEIAFCY--KGDIYKV----SAGGGTAIQLTTQPSYECTPIWSPDSKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----------- 327
           +   DI+ +       +RLT      + ++++PD   I+F +  +   Q           
Sbjct: 84  NGNFDIFVMPATGGTAQRLTTHSSSELPSAFTPDGKYILFSASIQDPSQSALFPTTAMTE 143

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +  NG   +++            ++P G+   +               S     I +
Sbjct: 144 LYKVPVNGGRTEQVL---GTPAEAVCYAPSGEFFLYQDRKGFEDEWRKNHTSSITRDIWL 200

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +   L       + P  SP G+S+    ++ G     +YS  L+
Sbjct: 201 YDTKTGKHTNLTNHAGEDRNPVLSPDGKSVYLLSERKGSF--NVYSFPLD 248



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 77/216 (35%), Gaps = 30/216 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A+    +        + +      K+I +  +      F+ + +    + +
Sbjct: 320 TVSPDGKQIAFIVRGE------VFVTSTDYATTKQITHTPAREAGLTFAPDNRTLAYASE 373

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS------------ASYSPDSSQIVFESDREGK 325
           ++    ++   +         N   I                 +SPD  ++ F  +R   
Sbjct: 374 RNGNWQLFLAKIARKEEANFPNATIIEEEVLLPSATVERAYPQFSPDGKELAFIEER--- 430

Query: 326 EQLYVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+  +    ++I+           FD  WSP G    + F     + +  IG++  
Sbjct: 431 NRLMVINLDTKKVRQITDGSTWFSTDGNFDYQWSPDGKWFTLEFIGNRHDPYSDIGLVSA 490

Query: 379 DG-SQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G S    L     +  +P W   G +++F+ ++ G
Sbjct: 491 KGDSPITNLTNSGYMSGSPRWVLDGNAILFTTERYG 526



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 80/233 (34%), Gaps = 31/233 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +   +++M      
Sbjct: 41  YKGDIYKVSAGGGTAIQLTTQPS-YECTPIWSPDSKQIAFASDRNGN-FDIFVM-PATGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATERL 297
             +R+    S  L   F+ +GK  L S    +             ++Y V +    TE++
Sbjct: 98  TAQRLTTHSSSELPSAFTPDGKYILFSASIQDPSQSALFPTTAMTELYKVPVNGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   Y+P     +++ DR+G                +++  +       ++ +
Sbjct: 158 LGTPAEAV--CYAPSGEFFLYQ-DRKGFEDEWRKNHTSSITRDIWLYDTKTGKHTNLT-N 213

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 +PV SP G  +         F +     D +Q+   V         +
Sbjct: 214 HAGEDRNPVLSPDGKSVYLLSERKGSFNVYSFPLDNAQDLKAVTSFKTHPVRF 266



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 130/365 (35%), Gaps = 53/365 (14%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEK 170
           G V  +GK     V   ++ V        K+   +PA  R+   T + D       +   
Sbjct: 319 GTVSPDGKQIAFIVRGEVF-VTSTDYATTKQITHTPA--REAGLTFAPDNRTLAYASERN 375

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G++   +  ++    +     ++            L PS       P+FSP+ +++A+  
Sbjct: 376 GNWQLFLAKIARKEEANFPNATII-------EEEVLLPSATVERAYPQFSPDGKELAF-- 426

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRA---LISVQKDEAMDIY 285
            ++ + L V  +DT+  R       + S       ++S +GK      I  + D   DI 
Sbjct: 427 IEERNRLMVINLDTKKVRQITDGSTWFSTDGNFDYQWSPDGKWFTLEFIGNRHDPYSDIG 486

Query: 286 SVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG-----------KEQLYVMQS 333
            V  +  +    LTN+ +++ S  +  D + I+F ++R G              L  +  
Sbjct: 487 LVSAKGDSPITNLTNSGYMSGSPRWVLDGNAILFTTERYGMRAHASWGSQNDAMLVFLNQ 546

Query: 334 NGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSG---------------EKFAIGVM 376
           +  D+ R+S++        +       +  +                     +   + + 
Sbjct: 547 DAFDKFRLSKEDYELQKELEKEQQKDKEKASIDPKKDKKKDPQTDTEKKDEIKNILVELN 606

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--TP 434
             +    RL    SNL +   S  G +L +    +G  G  L+ +DL  +   L++    
Sbjct: 607 GLEDRIIRLTPNSSNLGSTIISKDGETLYYLSAFEG--GFDLWKMDLRKKETKLLHKMNA 664

Query: 435 AYASD 439
            +AS 
Sbjct: 665 GWASM 669


>gi|294666207|ref|ZP_06731461.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604025|gb|EFF47422.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 779

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 52/232 (22%), Positives = 98/232 (42%), Gaps = 13/232 (5%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               +  +       P  SP+   VAYA+   +      L+ T  +  P+ +      + 
Sbjct: 216 RPYQVITAGGGFDLTPSLSPDGAMVAYASLTRDRAGTSILVKTTDNAYPRVLETPGPGVS 275

Query: 262 A--PRFSSNGKRALISVQK-DEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQI 316
              P +S +G++   S Q  D +  +        A  R  +       +S S+SPD   +
Sbjct: 276 DRLPAWSPDGRQIAFSRQAPDGSCRVMIAAATGPAASREVVRCDGADMLSFSWSPDGRAL 335

Query: 317 VFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFA 372
           VF S     G  ++  +       + +    +A  FD  P +SP G+ I F + + +   
Sbjct: 336 VFGSMTGTHGASRMRRLDLATRQWQALDYPAQAGDFDYAPRYSPDGNWIVFLR-NPQLGD 394

Query: 373 IGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +  +  +G   ERL  ++++++  +W P G  LIF R+ D +  ++LY +DL
Sbjct: 395 LWRIPAEGGVAERLTHDNADIRGWSWLPDGSGLIFGRRVDSE--ARLYRLDL 444



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 56/316 (17%), Positives = 101/316 (31%), Gaps = 58/316 (18%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           S+       S+ V   D A  R L TP        P +SP+ +++A++    +   RV +
Sbjct: 244 SLTRDRAGTSILVKTTDNAYPRVLETPGPGVSDRLPAWSPDGRQIAFSRQAPDGSCRVMI 303

Query: 242 MDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERL- 297
                  A + +       + +  +S +G+  +         A  +  +DL +   + L 
Sbjct: 304 AAATGPAASREVVRCDGADMLSFSWSPDGRALVFGSMTGTHGASRMRRLDLATRQWQALD 363

Query: 298 --TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                   + +  YSPD + IVF  + +    L+ + + G   +R++ D  A      W 
Sbjct: 364 YPAQAGDFDYAPRYSPDGNWIVFLRNPQ-LGDLWRIPAEGGVAERLTHD-NADIRGWSWL 421

Query: 356 PQGDLIAFTKFSGEKFAIGVMKK------------------------------------- 378
           P G  + F +    +  +  +                                       
Sbjct: 422 PDGSGLIFGRRVDSEARLYRLDLRDHSLHDVGVDDAQAPDVAHGHLVFVQRKPQFGVYQV 481

Query: 379 -----DGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR---NE 428
                +G   + RL         P  +P GR LIF+  + G  G     +   G     E
Sbjct: 482 IGDTMNGGYIRRRLFPSSGRDDQPMIAPDGRQLIFASNRSGAYGLWWGDVSKPGSVRLIE 541

Query: 429 TLINTPAYASDPQWVG 444
            L      A D  W  
Sbjct: 542 GLRPDSRQAGD--WSA 555



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 21/176 (11%)

Query: 292 NATER----LTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQD 344
            + +R    +T     +++ S SPD + + + S   DR G   L     N   +   +  
Sbjct: 212 GSPKRPYQVITAGGGFDLTPSLSPDGAMVAYASLTRDRAGTSILVKTTDNAYPRVLETPG 271

Query: 345 KEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPS 400
              S   P WSP G  IAF++ +      + +    G   S+E +  + +++ + +WSP 
Sbjct: 272 PGVSDRLPAWSPDGRQIAFSRQAPDGSCRVMIAAATGPAASREVVRCDGADMLSFSWSPD 331

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA----------YASDPQWVGFM 446
           GR+L+F         S++  +DL  R    ++ PA          Y+ D  W+ F+
Sbjct: 332 GRALVFGSMTGTHGASRMRRLDLATRQWQALDYPAQAGDFDYAPRYSPDGNWIVFL 387



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 75/256 (29%), Gaps = 52/256 (20%)

Query: 213 ILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             + PR+SP+   + +       D+ R+           +R+ +  + I    +  +G  
Sbjct: 371 FDYAPRYSPDGNWIVFLRNPQLGDLWRI----PAEGGVAERLTHDNADIRGWSWLPDGSG 426

Query: 272 ALISVQKDEAMDIYSVDLQ----------------------------------------- 290
            +   + D    +Y +DL+                                         
Sbjct: 427 LIFGRRVDSEARLYRLDLRDHSLHDVGVDDAQAPDVAHGHLVFVQRKPQFGVYQVIGDTM 486

Query: 291 --SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEA 347
                  RL  +   +     +PD  Q++F S+R G   L+    +     R+ +  +  
Sbjct: 487 NGGYIRRRLFPSSGRDDQPMIAPDGRQLIFASNRSGAYGLWWGDVSKPGSVRLIEGLRPD 546

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSL 404
           S     WS     +  +       A    V    G   RL V           P   R L
Sbjct: 547 SRQAGDWSADSQRVLVSGSDAAGHAALFEVTPGSGQVVRLPVPQPRPLQAIHLPDPDRLL 606

Query: 405 IFSRKKDGDTGSKLYS 420
           + +   DG T + LY 
Sbjct: 607 VLAAADDGHTFATLYD 622


>gi|294508436|ref|YP_003572494.1| acylaminoacyl-peptidase [Salinibacter ruber M8]
 gi|294344764|emb|CBH25542.1| acylaminoacyl-peptidase [Salinibacter ruber M8]
          Length = 703

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 103/278 (37%), Gaps = 58/278 (20%)

Query: 212 QILFEPRFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           + +  P+ SP+  ++ Y        +D     ++ +D       K +    ++  +PR+S
Sbjct: 61  EWVANPQVSPDGSQIVYQRRGMDVMEDRRTSALWRLDADGTDHTK-LTPRTAVESSPRWS 119

Query: 267 SNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------ 319
            +G +   +   +E   +IY   ++ N T R+T         S+SPD + + F       
Sbjct: 120 PDGSKIAFTSSDEEHGTEIYVHWVEQNKTARITQLENAPSGLSWSPDGAHLAFSMHVSAP 179

Query: 320 -----------------------------SDREG-----KEQLYVMQSNGSDQKRISQDK 345
                                        SD  G      + L+V++++G   ++++   
Sbjct: 180 EPTLASRPEPPEGADWAEPPRVETRLNHESDGTGVLDYGHDHLFVVRADGGRARQVTAGD 239

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF-------AIGVMKKDGSQERLLVEDSNLQA-PTW 397
                 PVW+P G+ + ++    + +        +  +  DG +   L +       P  
Sbjct: 240 YNHSSRPVWTPDGEALLYSASRHDNWERERRNSELYRVPVDGGESTPLTDRFGPDHTPRV 299

Query: 398 SPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLIN 432
           SP G ++ +    D     +   LY +D +G N  +++
Sbjct: 300 SPDGETIAYLGYDDEVQTYQVTRLYVMDRDGSNRRVVD 337



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 88/249 (35%), Gaps = 62/249 (24%)

Query: 259 MILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +  P+ S +G + +        ++      ++ +D       +LT    +  S  +SPD
Sbjct: 62  WVANPQVSPDGSQIVYQRRGMDVMEDRRTSALWRLDADGTDHTKLTPRTAVESSPRWSPD 121

Query: 313 SSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            S+I F  SD E   ++YV     +   RI+Q + A      WSP G  +AF+       
Sbjct: 122 GSKIAFTSSDEEHGTEIYVHWVEQNKTARITQLENAP-SGLSWSPDGAHLAFSMHVSAPE 180

Query: 367 -----------------------------------SGEKFAIGVMKKDGSQERLLVEDSN 391
                                                    + V++ DG + R +     
Sbjct: 181 PTLASRPEPPEGADWAEPPRVETRLNHESDGTGVLDYGHDHLFVVRADGGRARQVTAGDY 240

Query: 392 LQA--PTWSPSGRSLIFSRKKDG-----DTGSKLYSIDLNGRNETLIN-------TPAYA 437
             +  P W+P G +L++S  +          S+LY + ++G   T +        TP  +
Sbjct: 241 NHSSRPVWTPDGEALLYSASRHDNWERERRNSELYRVPVDGGESTPLTDRFGPDHTPRVS 300

Query: 438 SDPQWVGFM 446
            D + + ++
Sbjct: 301 PDGETIAYL 309



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 81/268 (30%), Gaps = 55/268 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S+I F S     G       V     A I  L  +   +     +SP+   +A++ +   
Sbjct: 123 SKIAFTSSDEEHGTEIYVHWVEQNKTARITQLENAPSGL----SWSPDGAHLAFSMHVSA 178

Query: 235 DIL---------------------------------------RVYLMDTRIDRAPKRIGN 255
                                                      ++++     RA +    
Sbjct: 179 PEPTLASRPEPPEGADWAEPPRVETRLNHESDGTGVLDYGHDHLFVVRADGGRARQVTAG 238

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISAS 308
             +    P ++ +G+  L S  + +  +       +Y V +    +  LT+    + +  
Sbjct: 239 DYNHSSRPVWTPDGEALLYSASRHDNWERERRNSELYRVPVDGGESTPLTDRFGPDHTPR 298

Query: 309 YSPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            SPD   I +    +  +     +LYVM  +GS+++ +      S  D  W   G+ +  
Sbjct: 299 VSPDGETIAYLGYDDEVQTYQVTRLYVMDRDGSNRRVVDLGLNRSIDDIAWDENGEGLYV 358

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                    +G    DGS   +      
Sbjct: 359 QYEDEGTTKLGHTTLDGSTSVVATNLGG 386



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 73/224 (32%), Gaps = 19/224 (8%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-----YDDEDIL 237
           + V     + L V+  DG   R +T         P ++P+ + + Y+      ++ E   
Sbjct: 212 TGVLDYGHDHLFVVRADGGRARQVTAGDYNHSSRPVWTPDGEALLYSASRHDNWERERRN 271

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEAMDIYSVDLQSN 292
                          + +       PR S +G+          VQ  +   +Y +D   +
Sbjct: 272 SELYRVPVDGGESTPLTDRFGPDHTPRVSPDGETIAYLGYDDEVQTYQVTRLYVMDRDGS 331

Query: 293 ATER--LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-- 348
                 L     I+  A +  +   +  + + EG  +L     +GS     +     S  
Sbjct: 332 NRRVVDLGLNRSIDDIA-WDENGEGLYVQYEDEGTTKLGHTTLDGSTSVVATNLGGTSIG 390

Query: 349 --YFDPVWS-PQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVE 388
             Y    +S  +   +AF + S      + V ++     R L +
Sbjct: 391 RPYGGGDFSVSEAGRLAFNQTSPAHPAELAVTRRGRDTTRQLTD 434


>gi|255009425|ref|ZP_05281551.1| putative exported tricorn protease [Bacteroides fragilis 3_1_12]
 gi|313147185|ref|ZP_07809378.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313135952|gb|EFR53312.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 1077

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 76/202 (37%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NGK  + S   D    +Y V       +RLT+ +   +   +SPD   I F    +G  +
Sbjct: 34  NGKEIVFSYAGD----LYKVPAAGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGNTE 89

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKF--AIG 374
           +Y M + G +  R++       D       P      W+P G  I +     + F   + 
Sbjct: 90  VYTMPATGGEPLRVTYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGKLF 149

Query: 375 VMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSIDL 423
            + K+G   +   L E       ++SP G+ L ++R            G     ++  + 
Sbjct: 150 TVDKEGGLSEAIPLPEGGFC---SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNP 206

Query: 424 NGRN-ETLINTPAYASDPQWVG 444
           N +  E + N  A    P W+G
Sbjct: 207 NSKTVENITNNVAQDIFPMWIG 228



 Score =  116 bits (291), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 58/342 (16%), Positives = 142/342 (41%), Gaps = 26/342 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKK-FFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            +   +R+  EFR W             +  +  +   I + ++ DI+    G++  F S
Sbjct: 176 KQLAYNRVMREFRTWKYYKGGMADDIWVYNPNSKTVENITNNVAQDIFPMWIGDEIFFLS 235

Query: 176 -RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   ++  V +   K +  V D    ++++ + S + I+FE     N   +        
Sbjct: 236 DRDRIMNIFVYNTKTKQTAKVTDFTEYDVKFPSASGNTIVFE-----NGGYIYKMDAATR 290

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +V +     +   +  + +  + + A   S +G R +++ +     +++++ ++   
Sbjct: 291 KAEKVNIALASDNIYARTDLKDGANYVTAASLSPDGARMVVTSRG----EVFNLPVEKGV 346

Query: 294 TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ +T +    +  A +SPD +QI + SD  G+ +LY+  + G +  +++   +    D 
Sbjct: 347 TKNITRSPGAHDRDAQWSPDGTQIAYISDATGETELYLQNAAGGEPMQLTHKNDTYIRDF 406

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            WSP    I +         + ++     +  LL++D        T+SP    L ++R  
Sbjct: 407 KWSPDSKKIVYMDRKN---RVNLLDVASGKVSLLLQDPVGVPGGVTFSPDSEWLTYTRM- 462

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
             +  + +Y  ++  + E  +        +P +++D +++ F
Sbjct: 463 GKNEINVVYVYNIAEKKEYPVTDKWYNSSSPVFSTDGKYLIF 504



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 94/280 (33%), Gaps = 39/280 (13%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  L +    GA +        ++L  P    N +++ ++     D+ +V        
Sbjct: 2   NKKLILSIFVLAGAPVLLSAAGEARLLRFPA--TNGKEIVFSY--AGDLYKV----PAAG 53

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-------NT 300
              +R+ +     + PRFS +GK    + Q D   ++Y++        R+T       + 
Sbjct: 54  GEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGNTEVYTMPATGGEPLRVTYTATNSRDD 113

Query: 301 LFINISA-----SYSPDSSQIVFESD-REG-KEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           L   +       +++PD  +IV+ +   +G   +L+ +   G   + I   +        
Sbjct: 114 LGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGKLFTVDKEGGLSEAIPLPEGGF---CS 170

Query: 354 WSPQGDLIAFTKF-----------SGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSG 401
           +SP G  +A+ +             G    I V   +      +  + +    P W   G
Sbjct: 171 YSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNPNSKTVENITNNVAQDIFPMWI--G 228

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             + F   +D      +Y+       +    T      P 
Sbjct: 229 DEIFFLSDRDRIMNIFVYNTKTKQTAKVTDFTEYDVKFPS 268



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 52/268 (19%), Positives = 97/268 (36%), Gaps = 43/268 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   + LT S       PRFSP+ + +A+    D +   VY M       P 
Sbjct: 45  DLYKVPAAGGEAQRLT-SHVGYEMFPRFSPDGKTIAFTGQYDGNT-EVYTM-PATGGEPL 101

Query: 252 RIG------------NFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERL 297
           R+                   +   ++ +G+R +    +    +  +++VD +   +E +
Sbjct: 102 RVTYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGKLFTVDKEGGLSEAI 161

Query: 298 TNTLFINISASYSPDSSQIVFES----DREGK-------EQLYVMQSNGSDQKRISQDKE 346
                     SYSPD  Q+ +       R  K       + ++V   N    + I+ +  
Sbjct: 162 PLPEG--GFCSYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNPNSKTVENITNNVA 219

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSL 404
              F P+W   GD I F         I V      Q   + +  + +++ P+ S  G ++
Sbjct: 220 QDIF-PMW--IGDEIFFLSDRDRIMNIFVYNTKTKQTAKVTDFTEYDVKFPSAS--GNTI 274

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +F      + G  +Y +D   R    +N
Sbjct: 275 VF------ENGGYIYKMDAATRKAEKVN 296



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 84/223 (37%), Gaps = 26/223 (11%)

Query: 107 GAQVLVTGRVIKEGKDRLRV--EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           GA  +    +  +G  R+ V     ++++   K +      S  A  R            
Sbjct: 313 GANYVTAASLSPDGA-RMVVTSRGEVFNLPVEKGVTKNITRSPGAHDRDA---------- 361

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                  D  ++I ++S++      +  L + +  G     LT   D  + + ++SP+ +
Sbjct: 362 ---QWSPDG-TQIAYISDATG----ETELYLQNAAGGEPMQLTHKNDTYIRDFKWSPDSK 413

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMD 283
           K+ Y    +    RV L+D    +    + +   +     FS + +    + + K+E   
Sbjct: 414 KIVYMDRKN----RVNLLDVASGKVSLLLQDPVGVPGGVTFSPDSEWLTYTRMGKNEINV 469

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +Y  ++       +T+  + + S  +S D   ++F S R+   
Sbjct: 470 VYVYNIAEKKEYPVTDKWYNSSSPVFSTDGKYLIFSSARDFNP 512


>gi|60679676|ref|YP_209820.1| putative peptidase/protease family protein [Bacteroides fragilis
           NCTC 9343]
 gi|253564534|ref|ZP_04841991.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|60491110|emb|CAH05858.1| putative peptidase/protease family protein [Bacteroides fragilis
           NCTC 9343]
 gi|251948310|gb|EES88592.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301161141|emb|CBW20679.1| putative peptidase/protease family protein [Bacteroides fragilis
           638R]
          Length = 1090

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 76/220 (34%), Gaps = 34/220 (15%)

Query: 253 IGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +        +P +      S +G       + D    IY V        +LT       +
Sbjct: 12  LTTLTGNAASPLWMRDVQISPDGTEIAFCYKGD----IYKVSAGGGTAIQLTTQPSYECT 67

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPDS QI F SDR G   ++VM + G   +R++    +S     ++P G  I F+  
Sbjct: 68  PIWSPDSKQIAFASDRNGNFDIFVMPATGGTAQRLTT-HSSSELPSAFTPDGKYILFSAS 126

Query: 367 SGEKF-----------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD---- 411
             +              +  +  +G +   ++     +A  ++PSG   ++  +K     
Sbjct: 127 IQDPSQSALFPTTAMTELYKVPVNGGRTEQVLGTP-AEAVCYAPSGEFFLYQDRKGFEDE 185

Query: 412 ------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                       ++  D   G++  L N      +P    
Sbjct: 186 WRKHHTSSITRDIWLYDTKTGKHTNLTNHAGEDRNPVLSP 225



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 80/230 (34%), Gaps = 35/230 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V    +       ++    S    P +S + K+   +  +
Sbjct: 30  ISPDGTEIAFCY--KGDIYKV----SAGGGTAIQLTTQPSYECTPIWSPDSKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----------- 327
           +   DI+ +       +RLT      + ++++PD   I+F +  +   Q           
Sbjct: 84  NGNFDIFVMPATGGTAQRLTTHSSSELPSAFTPDGKYILFSASIQDPSQSALFPTTAMTE 143

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +  NG   +++            ++P G+   +               S     I +
Sbjct: 144 LYKVPVNGGRTEQVL---GTPAEAVCYAPSGEFFLYQDRKGFEDEWRKHHTSSITRDIWL 200

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +   L       + P  SP G+S+    ++ G     +YS  L+
Sbjct: 201 YDTKTGKHTNLTNHAGEDRNPVLSPDGKSVYLLSERKGSF--NVYSFPLD 248



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 57/337 (16%), Positives = 119/337 (35%), Gaps = 41/337 (12%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  L+D K  K        +     R    +        ++  KG FN        S   
Sbjct: 197 DIWLYDTKTGKH---TNLTNHAGEDRNPVLSPDGKSVYLLSERKGSFN------VYSFPL 247

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              ++   V       +R+L+ S    L    ++ + +   Y   D+    ++ +   R 
Sbjct: 248 DNAQDLKAVTSFKTHPVRFLSMSHGGTLC---YAYDGE--IYTQKDNATPQKINIDIVRD 302

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D+       F +   +   S +GK+    V+     +++        T+++T+T      
Sbjct: 303 DQDKIADLTFTNGATSGTVSPDGKQIAFIVRG----EVFVTSTDYATTKQITHTPAREAG 358

Query: 307 ASYSPDSSQIVFESDREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWS 355
            +++PD+  + + S+R G  QL++             +   +++ +          P +S
Sbjct: 359 LTFAPDNRTLAYASERNGNWQLFLAKIARKEEANFPNATIIEEEVLLPSATVERAYPQFS 418

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFS 407
           P G  +AF +       + V+  D  + R + + S   +        WSP G+   L F 
Sbjct: 419 PDGKELAFIEERN---RLMVINLDTKKVRQITDGSTWFSTDGNFDYQWSPDGKWFTLEFI 475

Query: 408 RKKDGD-TGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             +    +   L S   +     L N+   +  P+WV
Sbjct: 476 GNRHDPYSDIGLVSAKGDSPITNLTNSGYMSGSPRWV 512



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 77/216 (35%), Gaps = 30/216 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A+    +        + +      K+I +  +      F+ + +    + +
Sbjct: 320 TVSPDGKQIAFIVRGE------VFVTSTDYATTKQITHTPAREAGLTFAPDNRTLAYASE 373

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS------------ASYSPDSSQIVFESDREGK 325
           ++    ++   +         N   I                 +SPD  ++ F  +R   
Sbjct: 374 RNGNWQLFLAKIARKEEANFPNATIIEEEVLLPSATVERAYPQFSPDGKELAFIEER--- 430

Query: 326 EQLYVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+  +    ++I+           FD  WSP G    + F     + +  IG++  
Sbjct: 431 NRLMVINLDTKKVRQITDGSTWFSTDGNFDYQWSPDGKWFTLEFIGNRHDPYSDIGLVSA 490

Query: 379 DG-SQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G S    L     +  +P W   G +++F+ ++ G
Sbjct: 491 KGDSPITNLTNSGYMSGSPRWVLDGNAILFTTERYG 526



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 80/233 (34%), Gaps = 31/233 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +   +++M      
Sbjct: 41  YKGDIYKVSAGGGTAIQLTTQPS-YECTPIWSPDSKQIAFASDRNGN-FDIFVM-PATGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATERL 297
             +R+    S  L   F+ +GK  L S    +             ++Y V +    TE++
Sbjct: 98  TAQRLTTHSSSELPSAFTPDGKYILFSASIQDPSQSALFPTTAMTELYKVPVNGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   Y+P     +++ DR+G                +++  +       ++ +
Sbjct: 158 LGTPAEAV--CYAPSGEFFLYQ-DRKGFEDEWRKHHTSSITRDIWLYDTKTGKHTNLT-N 213

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 +PV SP G  +         F +     D +Q+   V         +
Sbjct: 214 HAGEDRNPVLSPDGKSVYLLSERKGSFNVYSFPLDNAQDLKAVTSFKTHPVRF 266



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 130/365 (35%), Gaps = 53/365 (14%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEK 170
           G V  +GK     V   ++ V        K+   +PA  R+   T + D       +   
Sbjct: 319 GTVSPDGKQIAFIVRGEVF-VTSTDYATTKQITHTPA--REAGLTFAPDNRTLAYASERN 375

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G++   +  ++    +     ++            L PS       P+FSP+ +++A+  
Sbjct: 376 GNWQLFLAKIARKEEANFPNATII-------EEEVLLPSATVERAYPQFSPDGKELAF-- 426

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRA---LISVQKDEAMDIY 285
            ++ + L V  +DT+  R       + S       ++S +GK      I  + D   DI 
Sbjct: 427 IEERNRLMVINLDTKKVRQITDGSTWFSTDGNFDYQWSPDGKWFTLEFIGNRHDPYSDIG 486

Query: 286 SVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG-----------KEQLYVMQS 333
            V  +  +    LTN+ +++ S  +  D + I+F ++R G              L  +  
Sbjct: 487 LVSAKGDSPITNLTNSGYMSGSPRWVLDGNAILFTTERYGMRAHASWGSQNDAMLVFLNQ 546

Query: 334 NGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSG---------------EKFAIGVM 376
           +  D+ R+S++        +       +  +                     +   + + 
Sbjct: 547 DAFDKFRLSKEDYELQKELEKEQQKDKEKASIDPKKDKKKDPQTDTEKKDEIKNILVELN 606

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--TP 434
             +    RL    SNL +   S  G +L +    +G  G  L+ +DL  +   L++    
Sbjct: 607 GLEDRIIRLTPNSSNLGSTIISKDGETLYYLSAFEG--GFDLWKMDLRKKETKLLHKMNA 664

Query: 435 AYASD 439
            +AS 
Sbjct: 665 GWASM 669


>gi|158317342|ref|YP_001509850.1| serine/threonine protein kinase [Frankia sp. EAN1pec]
 gi|158112747|gb|ABW14944.1| serine/threonine protein kinase [Frankia sp. EAN1pec]
          Length = 721

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 56/253 (22%), Positives = 96/253 (37%), Gaps = 21/253 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A+I+ +T + D     P  S +++ V +      + L     D       K   +  +  
Sbjct: 466 ADIKPITTAADD-DMLPSISKDRRTVVFFRKGSPNALYAVAAD-GSGSPVKLFTSGPAAK 523

Query: 261 LA------PRFSSNGKRALISVQKDE----AMDIYSVDLQSNATERLTNTLFINISASYS 310
           L       P  S +GK  ++    DE       +Y V L  +   RL          ++S
Sbjct: 524 LTIADDARPSLSPDGKFLVVRSTTDESGFPNPGLYVVSLDGSGLFRLGAKPQA-TDPAWS 582

Query: 311 PDSSQIVFESDREGKEQLYVMQSN---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           P    I + S     ++ +++       S    I+  +     DP +SP G  IAF++  
Sbjct: 583 PSGELIAYWSSETESDRGFIVTIPARPDSQPTPITNGQGNRDADPTFSPDGKRIAFSREV 642

Query: 368 GEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI---DL 423
                I  M  DGS  ER+  E    Q P +SP G+ L F+ ++ G    ++Y     D 
Sbjct: 643 DGDLEIYQMNTDGSAVERVTAEPGRDQDPAYSPDGKLLSFTGER-GTPLRRIYLTDPADT 701

Query: 424 NGRNETLINTPAY 436
              +  L +T  +
Sbjct: 702 TAADRLLTSTAGF 714



 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 10/197 (5%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           TI+DD   S++ + G F   ++  S +  SG     L V+  DG+ +  L         +
Sbjct: 525 TIADDARPSLSPD-GKF---LVVRSTTDESGFPNPGLYVVSLDGSGLFRL--GAKPQATD 578

Query: 217 PRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALI 274
           P +SP+ + +AY + + E D   +  +  R D  P  I N +    A P FS +GKR   
Sbjct: 579 PAWSPSGELIAYWSSETESDRGFIVTIPARPDSQPTPITNGQGNRDADPTFSPDGKRIAF 638

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQ- 332
           S + D  ++IY ++   +A ER+T     +   +YSPD   + F  +R     ++Y+   
Sbjct: 639 SREVDGDLEIYQMNTDGSAVERVTAEPGRDQDPAYSPDGKLLSFTGERGTPLRRIYLTDP 698

Query: 333 SNGSDQKRISQDKEASY 349
           ++ +   R+       +
Sbjct: 699 ADTTAADRLLTSTAGFH 715



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 21/211 (9%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLF------I 303
           K I       + P  S + +  +   +         + D   +  +  T+          
Sbjct: 469 KPITTAADDDMLPSISKDRRTVVFFRKGSPNALYAVAADGSGSPVKLFTSGPAAKLTIAD 528

Query: 304 NISASYSPDSSQIVFES--DREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +   S SPD   +V  S  D  G     LYV+  +GS   R+    +A+  DP WSP G+
Sbjct: 529 DARPSLSPDGKFLVVRSTTDESGFPNPGLYVVSLDGSGLFRLGAKPQAT--DPAWSPSGE 586

Query: 360 LIAFTKF---SGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDT 414
           LIA+      S   F + +  +  SQ   +      +   PT+SP G+ + FSR+ DGD 
Sbjct: 587 LIAYWSSETESDRGFIVTIPARPDSQPTPITNGQGNRDADPTFSPDGKRIAFSREVDGD- 645

Query: 415 GSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
             ++Y ++ +G   E +   P    DP +  
Sbjct: 646 -LEIYQMNTDGSAVERVTAEPGRDQDPAYSP 675



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 65/194 (33%), Gaps = 21/194 (10%)

Query: 270 KRALISVQKDEAMDIYS--VDLQS--NATERLTNTLFINISASYSPDSSQIVFESDREGK 325
              + +  ++   D+++  V  Q      + +T     ++  S S D   +VF   R+G 
Sbjct: 440 DTMVFASDQNGNYDLFTGRVPAQGELADIKPITTAADDDMLPSISKDRRTVVF--FRKGS 497

Query: 326 EQ-LYVMQSNGSDQKRISQDKE-------ASYFDPVWSPQGDLIAFTKFSGE----KFAI 373
              LY + ++GS                 A    P  SP G  +     + E       +
Sbjct: 498 PNALYAVAADGSGSPVKLFTSGPAAKLTIADDARPSLSPDGKFLVVRSTTDESGFPNPGL 557

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            V+  DGS    L        P WSPSG  + +   +       + +I     ++    T
Sbjct: 558 YVVSLDGSGLFRLGAKPQATDPAWSPSGELIAYWSSETESDRGFIVTIPARPDSQPTPIT 617

Query: 434 PAYA---SDPQWVG 444
                  +DP +  
Sbjct: 618 NGQGNRDADPTFSP 631



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 17/148 (11%)

Query: 312 DSSQIVFESDREGKEQLYV--MQSNGS--DQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           D   +VF SD+ G   L+   + + G   D K I+   +     P  S     + F +  
Sbjct: 438 DLDTMVFASDQNGNYDLFTGRVPAQGELADIKPITTAAD-DDMLPSISKDRRTVVFFR-K 495

Query: 368 GEKFAIGVMKKDGSQ--ERLLVED-------SNLQAPTWSPSGRSLIF--SRKKDGDTGS 416
           G   A+  +  DGS    +L           ++   P+ SP G+ L+   +  + G    
Sbjct: 496 GSPNALYAVAADGSGSPVKLFTSGPAAKLTIADDARPSLSPDGKFLVVRSTTDESGFPNP 555

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVG 444
            LY + L+G     +     A+DP W  
Sbjct: 556 GLYVVSLDGSGLFRLGAKPQATDPAWSP 583


>gi|219847845|ref|YP_002462278.1| WD40 domain-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219542104|gb|ACL23842.1| WD40 domain protein beta Propeller [Chloroflexus aggregans DSM
           9485]
          Length = 618

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 75/190 (39%), Gaps = 12/190 (6%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           ++FVSE   +  +      +   G   +  +      +  P +SP+ + + + T + E  
Sbjct: 429 MVFVSERTGAPQLYLRRLNIPLRGFAQQITSYDPACNVETPTWSPDGRSLFWVT-NCEGN 487

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILA-----------PRFSSNGKRALISVQKDEAMDIY 285
             +Y  D R             + L             R S +GK+   +  +D   +IY
Sbjct: 488 FEIYRADVRYYYIDTLYAGVELVNLLNLTNNAANDRFARVSPDGKQIAFASDRDGNWEIY 547

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            ++   +   RLTN    + + ++SPD  Q+ F SDR+G  ++Y++  N           
Sbjct: 548 VMNSDGSNVRRLTNNPATDDAPTWSPDGRQLAFASDRDGDFEIYILNVNDGTVTTQVTQN 607

Query: 346 EASYFDPVWS 355
            A    P+W+
Sbjct: 608 TAQDRWPLWA 617



 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 57/325 (17%), Positives = 105/325 (32%), Gaps = 46/325 (14%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--FS 220
           Y  +       +     +  S +       L   + +G   R    + + + F  R  + 
Sbjct: 293 YPHLGMPWAAPDPVTPLIYASNIDTGSYWELYRANFNGGGQRLTFNNGETVAFSWRRSWE 352

Query: 221 PNQQKVAYATYDDEDILR-VYLMDTRIDRAPKR------------------------IGN 255
           P QQ +   +  +    R +Y ++     + +R                           
Sbjct: 353 PAQQYLIVDSRRNSPNYRQIYALNAIAADSGERAPGAGALRISYSNNDGTFPPPDNDFST 412

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYS----VDLQSNATERLTN-TLFINIS-ASY 309
                     S +G   +   ++  A  +Y     + L+    +++T+     N+   ++
Sbjct: 413 IPGSEYNAMVSPDGNLMVFVSERTGAPQLYLRRLNIPLRG-FAQQITSYDPACNVETPTW 471

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-----------VWSPQG 358
           SPD   + + ++ EG  ++Y           +    E                   SP G
Sbjct: 472 SPDGRSLFWVTNCEGNFEIYRADVRYYYIDTLYAGVELVNLLNLTNNAANDRFARVSPDG 531

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             IAF       + I VM  DGS  R L    +   APTWSP GR L F+  +DGD    
Sbjct: 532 KQIAFASDRDGNWEIYVMNSDGSNVRRLTNNPATDDAPTWSPDGRQLAFASDRDGDFEIY 591

Query: 418 LYSIDLNGRNETLINTPAYASDPQW 442
           + +++       +    A    P W
Sbjct: 592 ILNVNDGTVTTQVTQNTAQDRWPLW 616


>gi|312130125|ref|YP_003997465.1| peptidase s41 [Leadbetterella byssophila DSM 17132]
 gi|311906671|gb|ADQ17112.1| peptidase S41 [Leadbetterella byssophila DSM 17132]
          Length = 1081

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/242 (21%), Positives = 93/242 (38%), Gaps = 28/242 (11%)

Query: 214 LFEPRFSP-NQQKVAYATYDDEDILRVYLMDT----RIDRAPKRIGNFRSMILAPRFSSN 268
           L  P FS  +   + Y       I+  Y  D     +     +++ +   +   P+FS +
Sbjct: 13  LAVPAFSQVDASLMKYPDVSSTHIVFSYANDLWLVPKTGGQAQKLSSPPGVETYPKFSPD 72

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGK-- 325
           GK    S   D   D+Y V +      RLT+  + +    ++ D  +++F S R  GK  
Sbjct: 73  GKEIAFSGNYDGNTDVYVVPVTGGTPRRLTSHGYQDRVVDWTVDGKEVIFASARFSGKQR 132

Query: 326 -EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----------GEKFAI 373
             Q Y ++  G  + ++  +         +SP G  +A    S           G K  I
Sbjct: 133 YNQFYKVKKEGGPESKLPLE---YAEFGSFSPDGSKMAVVYMSQVGRYWKRYKGGTKGTI 189

Query: 374 GVMK-KDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
            +   KD + +R+   +    + P WS  G  L F   +  +    L+S D   G+ E L
Sbjct: 190 QIYDFKDNTSKRISPQDGGGDEFPMWS--GDVLYFLSDRGKEERMNLWSYDTKTGKTEQL 247

Query: 431 IN 432
            +
Sbjct: 248 TH 249



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 106/296 (35%), Gaps = 18/296 (6%)

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI-YQSITGEKGDFNSRILFVSES 183
            V + L D    +++    + +      ++ H    DI Y S+   +  F         S
Sbjct: 218 DVLYFLSDRGKEERMNLWSYDTKTGKTEQLTHYKDLDIHYPSLGNGEIIFEQGGKLHLYS 277

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           +    +K     +  D ++      S D+ +     S + ++  ++   D     V+ + 
Sbjct: 278 IKDKTVKTVQVQILSDMSDYMPRQESVDRYIQSVSLSYDGKRALFSARGD-----VFSLP 332

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTN-TL 301
           T+   A             P +S NGK       +    ++Y   ++  +  ++LT+   
Sbjct: 333 TKEGVARNLTNTSGIAERTPEYSPNGKNIAFWSDESGEYELYLQSIEQPSTKKKLTSYGP 392

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-----RISQDKEASYFDPVWSP 356
               +  +SPDS +I F  D+ G  ++ V   +    K      I      + F   WS 
Sbjct: 393 GFKYTPYWSPDSKKICFI-DQAG--EIKVFDLSTQTTKKVDKLLIFSHGNTAGFSCEWSS 449

Query: 357 QGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKK 410
               IA+++        + +   +  +   + +     + P++ PSGR L    ++
Sbjct: 450 DSRWIAYSRDLPNSHRAVFLYNVESGKSTKITDGFYSCSNPSFDPSGRYLFVVTQQ 505



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 104/276 (37%), Gaps = 40/276 (14%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           S+       ++ I+F           N L ++ + G   + L+ S   +   P+FSP+ +
Sbjct: 24  SLMKYPDVSSTHIVF--------SYANDLWLVPKTGGQAQKLS-SPPGVETYPKFSPDGK 74

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----DE 280
           ++A++   D +   VY++       P+R+ +         ++ +GK  + +  +      
Sbjct: 75  EIAFSGNYDGNT-DVYVVPV-TGGTPRRLTSHGYQDRVVDWTVDGKEVIFASARFSGKQR 132

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FESDREG---------KEQLY 329
               Y V  +     +L          S+SPD S++   + S             K  + 
Sbjct: 133 YNQFYKVKKEGGPESKLPLEYAE--FGSFSPDGSKMAVVYMSQVGRYWKRYKGGTKGTIQ 190

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLV 387
           +     +  KRIS         P+WS  GD++ F    G  E+  +        +   L 
Sbjct: 191 IYDFKDNTSKRISPQDGGGDEFPMWS--GDVLYFLSDRGKEERMNLWSYDTKTGKTEQLT 248

Query: 388 E--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              D ++  P+   +G  +IF  ++ G     LYSI
Sbjct: 249 HYKDLDIHYPS-LGNGE-IIF--EQGGK--LHLYSI 278



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 55/371 (14%), Positives = 110/371 (29%), Gaps = 91/371 (24%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R  +H   D +       K      ++F S         N    + ++G     L     
Sbjct: 100 RLTSHGYQDRVVDWTVDGK-----EVIFASARFSGKQRYNQFYKVKKEGGPESKLPL--- 151

Query: 212 QILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRI--------DRAPKRIG-NFRSMIL 261
           +      FSP+  K+A           + Y   T+         D   KRI         
Sbjct: 152 EYAEFGSFSPDGSKMAVVYMSQVGRYWKRYKGGTKGTIQIYDFKDNTSKRISPQDGGGDE 211

Query: 262 APRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFI---------------- 303
            P +S  G        +   E M+++S D ++  TE+LT+   +                
Sbjct: 212 FPMWS--GDVLYFLSDRGKEERMNLWSYDTKTGKTEQLTHYKDLDIHYPSLGNGEIIFEQ 269

Query: 304 --------------------------NISA------------SYSPDSSQIVFESDREGK 325
                                     +               S S D  + +F +    +
Sbjct: 270 GGKLHLYSIKDKTVKTVQVQILSDMSDYMPRQESVDRYIQSVSLSYDGKRALFSA----R 325

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQER 384
             ++ + +     + ++     +   P +SP G  IAF      ++ + +   +  S ++
Sbjct: 326 GDVFSLPTKEGVARNLTNTSGIAERTPEYSPNGKNIAFWSDESGEYELYLQSIEQPSTKK 385

Query: 385 LLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA------- 435
            L          P WSP  + + F  +        L +      ++ LI +         
Sbjct: 386 KLTSYGPGFKYTPYWSPDSKKICFIDQAGEIKVFDLSTQTTKKVDKLLIFSHGNTAGFSC 445

Query: 436 -YASDPQWVGF 445
            ++SD +W+ +
Sbjct: 446 EWSSDSRWIAY 456



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 9/84 (10%)

Query: 356 PQ--GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
           P      I F+  +     + ++ K G Q + L     ++  P +SP G+ + FS   DG
Sbjct: 29  PDVSSTHIVFSYAND----LWLVPKTGGQAQKLSSPPGVETYPKFSPDGKEIAFSGNYDG 84

Query: 413 DTGSKLYSIDLNGRNETLINTPAY 436
           +T   +Y + + G     + +  Y
Sbjct: 85  NT--DVYVVPVTGGTPRRLTSHGY 106


>gi|32564215|ref|NP_496867.2| Temporarily Assigned Gene name family member (tag-10)
           [Caenorhabditis elegans]
 gi|25809200|emb|CAB05698.2| C. elegans protein C31C9.1a, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|25809223|emb|CAB02296.2| C. elegans protein C31C9.1a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 473

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 81/208 (38%), Gaps = 32/208 (15%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           R     +R+ +          S +G +   +  +   +++Y +D+      ++TN L  +
Sbjct: 203 RYGNFVQRLTDSPGYDAEGVVSPDGTKIAFTSIRSGDLELYIMDIDGKNLIQITNELGYD 262

Query: 305 ISASYSPDSSQIVFESDREGK--------------------EQLYVMQSNGSDQKRISQD 344
             + ++PD  +++F + R                        +L+++  +G + ++I+  
Sbjct: 263 GGSFFTPDGKRLIFRASRPKNETEIAKYKKLLSYNLVEPIAMELFIVDIDGQNLRKITNL 322

Query: 345 KEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTW- 397
            EA++   + +     I F+            F++ ++  DG+  + +      Q  ++ 
Sbjct: 323 GEANWAPYMLN-DNKRIIFSSNYDTAANGFGAFSLYMVNDDGTGLQQIT-FGQNQFNSFA 380

Query: 398 --SPSGRSLIFSRKKDGDT-GSKLYSID 422
             S  G+ L++   ++G      L+  D
Sbjct: 381 MQSYDGKKLVWGSSRNGTMYELNLFIAD 408



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 26/176 (14%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DI+ VD   N  +RLT++   +     SPD ++I F S R G  +LY+M  +G +  +I
Sbjct: 196 YDIFKVDRYGNFVQRLTDSPGYDAEGVVSPDGTKIAFTSIRSGDLELYIMDIDGKNLIQI 255

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEK--------------------FAIGVMKKDGS 381
           + +         ++P G  + F     +                       + ++  DG 
Sbjct: 256 TNEL-GYDGGSFFTPDGKRLIFRASRPKNETEIAKYKKLLSYNLVEPIAMELFIVDIDGQ 314

Query: 382 QERLLVEDS-NLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLIN 432
             R +        AP      + +IFS   D    G     LY ++ +G     I 
Sbjct: 315 NLRKITNLGEANWAPYMLNDNKRIIFSSNYDTAANGFGAFSLYMVNDDGTGLQQIT 370



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 82/217 (37%), Gaps = 30/217 (13%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              +  +DR G N             E   SP+  K+A+ +    D L +Y+MD    + 
Sbjct: 195 DYDIFKVDRYG-NFVQRLTDSPGYDAEGVVSPDGTKIAFTSIRSGD-LELYIMDID-GKN 251

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEA--------------------MDIYSVDL 289
             +I N         F+ +GKR +    + +                     M+++ VD+
Sbjct: 252 LIQITNELGYDGGSFFTPDGKRLIFRASRPKNETEIAKYKKLLSYNLVEPIAMELFIVDI 311

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQ 343
                 ++TN    N +     D+ +I+F S+ +      G   LY++  +G+  ++I+ 
Sbjct: 312 DGQNLRKITNLGEANWAPYMLNDNKRIIFSSNYDTAANGFGAFSLYMVNDDGTGLQQITF 371

Query: 344 DKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKD 379
            +       + S  G  + + +  +G  + + +   D
Sbjct: 372 GQNQFNSFAMQSYDGKKLVWGSSRNGTMYELNLFIAD 408



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/282 (17%), Positives = 94/282 (33%), Gaps = 41/282 (14%)

Query: 195 VMDRDG----ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRID-- 247
           V+  DG    AN++ LT           FS +  K+         D  ++Y +D  ID  
Sbjct: 61  VVHFDGETHLANVKQLTFGGMNAEGY--FSFDNSKLTLQATGYGTDCDQIYELDLNIDPR 118

Query: 248 -RAPKRIGNFRSMILAPRF--SSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFI 303
            +  +RI           F   ++    L +          + D+      ++  N    
Sbjct: 119 LQTLRRISTGLGATTCSYFYKEADNNHRLYAGNWWNVKVDNTTDVSKTCPPKQCANPQTD 178

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +    +       +  D      ++ +   G+  +R++ D      + V SP G  IAF
Sbjct: 179 ELKHLCNTS-----YTWDIFADYDIFKVDRYGNFVQRLT-DSPGYDAEGVVSPDGTKIAF 232

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGS------ 416
           T        + +M  DG     +  +        ++P G+ LIF   +  +         
Sbjct: 233 TSIRSGDLELYIMDIDGKNLIQITNELGYDGGSFFTPDGKRLIFRASRPKNETEIAKYKK 292

Query: 417 ------------KLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                       +L+ +D++G+N   I     A+   W  +M
Sbjct: 293 LLSYNLVEPIAMELFIVDIDGQNLRKITNLGEAN---WAPYM 331


>gi|108803163|ref|YP_643100.1| peptidase S9, prolyl oligopeptidase active site region [Rubrobacter
           xylanophilus DSM 9941]
 gi|108764406|gb|ABG03288.1| peptidase S9, prolyl oligopeptidase active site region [Rubrobacter
           xylanophilus DSM 9941]
          Length = 588

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 5/172 (2%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G+R             + V  +    E+LT        A YSP + ++V+  D  G
Sbjct: 19  WSPDGRRVTFITSITGVPQAWEVAAEGGWPEQLTFHEERVAQAEYSPAAERLVYSMDAGG 78

Query: 325 K--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDG 380
               QL+V+      ++ ++   +A +    +SP G  IA+  T+ +G  F + V   DG
Sbjct: 79  NERMQLFVLDRRTGVERDLTGRPDAIHHFGAFSPDGGRIAYTATRRNGTDFDVYVQSLDG 138

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             E +           WSP G SL+ SR +  +    L+ +DL     TL+ 
Sbjct: 139 EPEPVWEVSGYHAVACWSPDGSSLVVSRHRS-NMDGDLFLLDLESGEATLLT 189



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 103/281 (36%), Gaps = 12/281 (4%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
             E      R+++  ++   G  +  L V+DR     R LT   D I     FSP+  ++
Sbjct: 60  QAEYSPAAERLVYSMDAG--GNERMQLFVLDRRTGVERDLTGRPDAIHHFGAFSPDGGRI 117

Query: 227 AYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDI 284
           AY  T  +     VY+     D  P+ +           +S +G   ++S  + +   D+
Sbjct: 118 AYTATRRNGTDFDVYVQSL--DGEPEPVWEVSGYHAVACWSPDGSSLVVSRHRSNMDGDL 175

Query: 285 YSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRI 341
           + +DL+S     LT         SA  +PD   +   +DR+G   +L  +  +  + + +
Sbjct: 176 FLLDLESGEATLLTPHEGEARFHSARITPDGRSLYLATDRDGDFLRLARLDLSTLEVEYL 235

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPS 400
           + D +        S  G  +A T+       + +   +G +               +SP 
Sbjct: 236 TPD-DHDVEGVELSRDGRYLAATRNVEGYSDLMLFTGEGRRMPDPQPPQGVFGGLAFSPD 294

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            R L  +     D    ++ ++L       +     A  P+
Sbjct: 295 SRRLALTLT-GPDRNPDIWVLELPDGEARRLTRSTTAGIPR 334



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 85/215 (39%), Gaps = 14/215 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ ++V + T      +            P+++      +    +S   +R + S+  
Sbjct: 19  WSPDGRRVTFITSITG--VPQAWEVAAEGGWPEQLTFHEERVAQAEYSPAAERLVYSMDA 76

Query: 279 DEA--MDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDR--EGKEQLYVMQS 333
                M ++ +D ++     LT     I+   ++SPD  +I + + R       +YV   
Sbjct: 77  GGNERMQLFVLDRRTGVERDLTGRPDAIHHFGAFSPDGGRIAYTATRRNGTDFDVYVQSL 136

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLV---ED 389
           +G  +     +    +    WSP G  +  +   S     + ++  +  +  LL     +
Sbjct: 137 DGEPEPV--WEVSGYHAVACWSPDGSSLVVSRHRSNMDGDLFLLDLESGEATLLTPHEGE 194

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +   +   +P GRSL  +  +DGD   +L  +DL+
Sbjct: 195 ARFHSARITPDGRSLYLATDRDGDF-LRLARLDLS 228



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 57/144 (39%), Gaps = 5/144 (3%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             A +SPD  ++ F +   G  Q + + + G   ++++  +E       +SP  + + ++
Sbjct: 15  YGAGWSPDGRRVTFITSITGVPQAWEVAAEGGWPEQLTFHEER-VAQAEYSPAAERLVYS 73

Query: 365 KFSGEK--FAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +G      + V+ +    ER L    +       +SP G  + ++  +   T   +Y 
Sbjct: 74  MDAGGNERMQLFVLDRRTGVERDLTGRPDAIHHFGAFSPDGGRIAYTATRRNGTDFDVYV 133

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
             L+G  E +     Y +   W  
Sbjct: 134 QSLDGEPEPVWEVSGYHAVACWSP 157



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 93/246 (37%), Gaps = 18/246 (7%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSP 221
           Y ++     D +S ++    S + G     L ++D +      LTP   +  F   R +P
Sbjct: 149 YHAVACWSPDGSSLVVSRHRSNMDG----DLFLLDLESGEATLLTPHEGEARFHSARITP 204

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +  AT  D D LR+  +D       + +      +     S +G+    +   +  
Sbjct: 205 DGRSLYLATDRDGDFLRLARLDLST-LEVEYLTPDDHDVEGVELSRDGRYLAATRNVEGY 263

Query: 282 MDIYSVDLQSNATERLTNTL---FINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSD 337
            D+      +    R+ +      +    ++SPDS ++    +  +    ++V++    +
Sbjct: 264 SDLMLF---TGEGRRMPDPQPPQGVFGGLAFSPDSRRLALTLTGPDRNPDIWVLELPDGE 320

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQ 393
            +R+++   A      +  +  L+ +  F G K    + + +     ++V+        +
Sbjct: 321 ARRLTRSTTAGIPRSTF-RRPRLVRYPTFDGRKIPALLYEPEAGNAPVVVDVHGGPEAQE 379

Query: 394 APTWSP 399
            P + P
Sbjct: 380 RPDFDP 385


>gi|53711360|ref|YP_097352.1| putative Tricorn-like protease [Bacteroides fragilis YCH46]
 gi|52214225|dbj|BAD46818.1| putative Tricorn-like protease [Bacteroides fragilis YCH46]
          Length = 1090

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 76/220 (34%), Gaps = 34/220 (15%)

Query: 253 IGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +        +P +      S +G       + D    IY V        RLT       +
Sbjct: 12  LTTLTGNAASPLWMRDVQISPDGTEIAFCYKGD----IYKVSAGGGTAIRLTTQPSYECT 67

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPDS QI F SDR G   ++VM + G   +R++    +S     ++P G  I F+  
Sbjct: 68  PIWSPDSKQIAFASDRNGNFDIFVMPATGGTAQRLTT-HSSSELPSAFTPDGKYILFSAS 126

Query: 367 SGEKF-----------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD---- 411
             +              +  +  +G +   ++     +A  ++PSG   ++  +K     
Sbjct: 127 IQDPSQSALFPTTAMTELYKVPVNGGRTEQVLGTP-AEAVCYAPSGEFFLYQDRKGFEDE 185

Query: 412 ------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                       ++  D   G++  L +      +P    
Sbjct: 186 WRKHHTSSITRDIWLYDTKTGKHTNLTHHAGEDRNPVLSP 225



 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 80/230 (34%), Gaps = 35/230 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V    +       R+    S    P +S + K+   +  +
Sbjct: 30  ISPDGTEIAFCY--KGDIYKV----SAGGGTAIRLTTQPSYECTPIWSPDSKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----------- 327
           +   DI+ +       +RLT      + ++++PD   I+F +  +   Q           
Sbjct: 84  NGNFDIFVMPATGGTAQRLTTHSSSELPSAFTPDGKYILFSASIQDPSQSALFPTTAMTE 143

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +  NG   +++            ++P G+   +               S     I +
Sbjct: 144 LYKVPVNGGRTEQVL---GTPAEAVCYAPSGEFFLYQDRKGFEDEWRKHHTSSITRDIWL 200

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +   L       + P  SP G+S+    ++ G     +YS  L+
Sbjct: 201 YDTKTGKHTNLTHHAGEDRNPVLSPDGKSVYLLSERKGSF--NVYSFPLD 248



 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 57/337 (16%), Positives = 118/337 (35%), Gaps = 41/337 (12%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  L+D K  K              R    +        ++  KG FN        S   
Sbjct: 197 DIWLYDTKTGKH---TNLTHHAGEDRNPVLSPDGKSVYLLSERKGSFN------VYSFPL 247

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              ++   V       +R+L+ S    L    ++ + +   Y   D+    ++ +   R 
Sbjct: 248 DNAQDLKAVTSFKTHPVRFLSMSHGGTLC---YAYDGE--IYTQKDNATPQKINIDIVRD 302

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D+       F +   +   S +GK+    V+     +++        T+++T+T      
Sbjct: 303 DQDKIADLTFTNGATSGTVSPDGKQIAFIVRG----EVFVTSTDYATTKQITHTPAREAG 358

Query: 307 ASYSPDSSQIVFESDREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWS 355
            +++PD+  + + S+R G  QL++             +   +++ +          P +S
Sbjct: 359 LTFAPDNRTLAYASERNGNWQLFLAKIARKEEANFPNATIIEEEVLLPSATVERAYPQFS 418

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFS 407
           P G  +AF +       + V+  D  + R + + S   +        WSP G+   L F 
Sbjct: 419 PDGKELAFIEERN---RLMVINLDTKKVRQITDGSTWFSTDGNFDYQWSPDGKWFTLEFI 475

Query: 408 RKKDGD-TGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             +    +   L S   +     L N+   +  P+WV
Sbjct: 476 GNRHDPYSDIGLVSAKGDSPITNLTNSGYMSGSPRWV 512



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 77/216 (35%), Gaps = 30/216 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A+    +        + +      K+I +  +      F+ + +    + +
Sbjct: 320 TVSPDGKQIAFIVRGE------VFVTSTDYATTKQITHTPAREAGLTFAPDNRTLAYASE 373

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS------------ASYSPDSSQIVFESDREGK 325
           ++    ++   +         N   I                 +SPD  ++ F  +R   
Sbjct: 374 RNGNWQLFLAKIARKEEANFPNATIIEEEVLLPSATVERAYPQFSPDGKELAFIEER--- 430

Query: 326 EQLYVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+  +    ++I+           FD  WSP G    + F     + +  IG++  
Sbjct: 431 NRLMVINLDTKKVRQITDGSTWFSTDGNFDYQWSPDGKWFTLEFIGNRHDPYSDIGLVSA 490

Query: 379 DG-SQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G S    L     +  +P W   G +++F+ ++ G
Sbjct: 491 KGDSPITNLTNSGYMSGSPRWVLDGNAILFTTERYG 526



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 79/233 (33%), Gaps = 31/233 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +   +++M      
Sbjct: 41  YKGDIYKVSAGGGTAIRLTTQPS-YECTPIWSPDSKQIAFASDRNGN-FDIFVM-PATGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATERL 297
             +R+    S  L   F+ +GK  L S    +             ++Y V +    TE++
Sbjct: 98  TAQRLTTHSSSELPSAFTPDGKYILFSASIQDPSQSALFPTTAMTELYKVPVNGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   Y+P     +++ DR+G                +++  +       ++  
Sbjct: 158 LGTPAEAV--CYAPSGEFFLYQ-DRKGFEDEWRKHHTSSITRDIWLYDTKTGKHTNLTH- 213

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 +PV SP G  +         F +     D +Q+   V         +
Sbjct: 214 HAGEDRNPVLSPDGKSVYLLSERKGSFNVYSFPLDNAQDLKAVTSFKTHPVRF 266



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 64/365 (17%), Positives = 130/365 (35%), Gaps = 53/365 (14%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEK 170
           G V  +GK     V   ++ V        K+   +PA  R+   T + D       +   
Sbjct: 319 GTVSPDGKQIAFIVRGEVF-VTSTDYATTKQITHTPA--REAGLTFAPDNRTLAYASERN 375

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G++   +  ++    +     ++            L PS       P+FSP+ +++A+  
Sbjct: 376 GNWQLFLAKIARKEEANFPNATII-------EEEVLLPSATVERAYPQFSPDGKELAF-- 426

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRA---LISVQKDEAMDIY 285
            ++ + L V  +DT+  R       + S       ++S +GK      I  + D   DI 
Sbjct: 427 IEERNRLMVINLDTKKVRQITDGSTWFSTDGNFDYQWSPDGKWFTLEFIGNRHDPYSDIG 486

Query: 286 SVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG-----------KEQLYVMQS 333
            V  +  +    LTN+ +++ S  +  D + I+F ++R G              L  +  
Sbjct: 487 LVSAKGDSPITNLTNSGYMSGSPRWVLDGNAILFTTERYGMRAHASWGSQNDAMLVFLNQ 546

Query: 334 NGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSG---------------EKFAIGVM 376
           +  D+ R+S++        +       +  +                     +   + + 
Sbjct: 547 DAFDKFRLSKEDYELQKELEKEQQKDKEKASIDPKKDKKKDPQTDTEKKDEIKNILVELN 606

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--TP 434
             +    RL    SNL +   S  G +L +    +G  G  L+ +DL  +   L++    
Sbjct: 607 GLEDRIIRLTPNSSNLGSTIISKDGETLYYLSAFEG--GFDLWKMDLRKKETKLLHKMNA 664

Query: 435 AYASD 439
            +AS 
Sbjct: 665 GWASM 669


>gi|313886322|ref|ZP_07820047.1| WD40-like protein [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924191|gb|EFR34975.1| WD40-like protein [Porphyromonas asaccharolytica PR426713P-I]
          Length = 1097

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 75/211 (35%), Gaps = 33/211 (15%)

Query: 262 APRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            PR+      S +G +     Q D    IY VD        LT +       ++SPD  +
Sbjct: 30  TPRWLRYAQISPDGNQIAFCYQGD----IYIVDAIGGEARLLTGSDGYESHPTWSPDGKR 85

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           I F S+R+G   +Y M + G D KRI+     S+    ++P G  I  +           
Sbjct: 86  IAFMSNRDGHRSIYTMSALGGDVKRITHHSGNSHTVECYTPDGRFIIMSESLQQPATSAL 145

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG-RSLI---------FSRKKDGDT 414
             SG    + ++  DG    +L     L+A T+S  G R +          + +      
Sbjct: 146 NPSGILSQLYMIPVDGGTP-MLYNARPLEAVTFSHRGDRYVAQDIKGFENKWRKHHTSSV 204

Query: 415 GSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
              +Y +D   G        P     P +  
Sbjct: 205 TRDIYIVDPKTGATTACTLEPGEDLSPVFGP 235



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 55/303 (18%), Positives = 109/303 (35%), Gaps = 38/303 (12%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           + ++   G  +  + F+SE   S  +   +          + +T  R+  +     S + 
Sbjct: 227 EDLSPVFGPDDQTVFFISERGKSNSLN--VWKQRIGEQTAQQVTSFRNHPVRFLSISRSG 284

Query: 224 Q-KVAY----ATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +   AY     T  +    +   +  R     D+  +R  +       P  SS+GK+   
Sbjct: 285 RLCFAYDGDLYTMTEGRSPQKVQITLRTEGPKDKVYRRTASSGGSSFTP--SSDGKQLAF 342

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            ++ D    +Y   ++   T+R+T +     S ++SPDS  +V++S R+GK  LY     
Sbjct: 343 IMRGD----VYVTSVEHGTTKRITQSAGAEESVTWSPDSKTLVYDSRRDGKHILYKATIA 398

Query: 335 GS-----------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                         ++ +  + +     P +SP G LIAF    G++  I     +  + 
Sbjct: 399 SDKELDFASATIIKEEPLMPECKMEQALPQYSPDGKLIAFV---GDRKRIYTYNVESKKL 455

Query: 384 RLLVEDSN------LQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAY 436
             +    +        +  WSP  R + F    +       +  +   G     +    Y
Sbjct: 456 TQVTSGKDQPEMHGYISYEWSPDSRWIAFGYTPNVHAPFGDVGLVRATGGEVINLTNTGY 515

Query: 437 ASD 439
            SD
Sbjct: 516 FSD 518



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 79/236 (33%), Gaps = 44/236 (18%)

Query: 217 PRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           PR+      SP+  ++A+    D     +Y++D  I    + +         P +S +GK
Sbjct: 31  PRWLRYAQISPDGNQIAFCYQGD-----IYIVD-AIGGEARLLTGSDGYESHPTWSPDGK 84

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVF--------ES- 320
           R      +D    IY++       +R+T+     +    Y+PD   I+          S 
Sbjct: 85  RIAFMSNRDGHRSIYTMSALGGDVKRITHHSGNSHTVECYTPDGRFIIMSESLQQPATSA 144

Query: 321 -DREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------ 372
            +  G   QLY++  +G                  +S +GD   +     + F       
Sbjct: 145 LNPSGILSQLYMIPVDGGTP---MLYNARPLEAVTFSHRGDR--YVAQDIKGFENKWRKH 199

Query: 373 --------IGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                   I ++           +E     +P + P  +++ F  ++       ++
Sbjct: 200 HTSSVTRDIYIVDPKTGATTACTLEPGEDLSPVFGPDDQTVFFISERGKSNSLNVW 255



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 77/233 (33%), Gaps = 31/233 (13%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T S     F P  S + +++A+    D     VY+         KRI        +  +S
Sbjct: 323 TASSGGSSFTP--SSDGKQLAFIMRGD-----VYVTSVE-HGTTKRITQSAGAEESVTWS 374

Query: 267 SNGKRALISVQKDEAMDIYSVDLQS------------NATERLTNTLFINISASYSPDSS 314
            + K  +   ++D    +Y   + S                 +           YSPD  
Sbjct: 375 PDSKTLVYDSRRDGKHILYKATIASDKELDFASATIIKEEPLMPECKMEQALPQYSPDGK 434

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDLIAF--TKFSG 368
            I F  DR   +++Y          +++  K+      Y    WSP    IAF  T    
Sbjct: 435 LIAFVGDR---KRIYTYNVESKKLTQVTSGKDQPEMHGYISYEWSPDSRWIAFGYTPNVH 491

Query: 369 EKF-AIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLY 419
             F  +G+++  G +   L         T W   G +++F+  + G      +
Sbjct: 492 APFGDVGLVRATGGEVINLTNTGYFSDLTGWVMDGNAILFTSDRYGMRNHASW 544



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 105/335 (31%), Gaps = 88/335 (26%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  + ++D  G   R L    D     P +SP+ +++A+ +  D     +Y M + +  
Sbjct: 50  YQGDIYIVDAIGGEAR-LLTGSDGYESHPTWSPDGKRIAFMSNRDGH-RSIYTM-SALGG 106

Query: 249 APKRIGNFRSMILAP-RFSSNGKRALIS----------VQKDEAM-DIYSVDLQSNAT-- 294
             KRI +          ++ +G+  ++S          +     +  +Y + +       
Sbjct: 107 DVKRITHHSGNSHTVECYTPDGRFIIMSESLQQPATSALNPSGILSQLYMIPVDGGTPML 166

Query: 295 -----------------------------------ERLTNTLFI---------------- 303
                                                +T  ++I                
Sbjct: 167 YNARPLEAVTFSHRGDRYVAQDIKGFENKWRKHHTSSVTRDIYIVDPKTGATTACTLEPG 226

Query: 304 -NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSP---- 356
            ++S  + PD   + F S+R     L V +    +Q  ++++  +         S     
Sbjct: 227 EDLSPVFGPDDQTVFFISERGKSNSLNVWKQRIGEQTAQQVTSFRNHPVRFLSISRSGRL 286

Query: 357 ----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGRSLIFSRKK 410
                GDL   T+    +     ++ +G ++++    ++    +++P   G+ L F  + 
Sbjct: 287 CFAYDGDLYTMTEGRSPQKVQITLRTEGPKDKVYRRTASSGGSSFTPSSDGKQLAFIMR- 345

Query: 411 DGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                  +Y   + +G  + +  +        W  
Sbjct: 346 -----GDVYVTSVEHGTTKRITQSAGAEESVTWSP 375



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
           ++Q+          SP G+ IAF         I ++   G + RLL   D     PTWSP
Sbjct: 26  VAQETPRWLRYAQISPDGNQIAFCYQGD----IYIVDAIGGEARLLTGSDGYESHPTWSP 81

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            G+ + F   +DG     +Y++   G +   I   +  S 
Sbjct: 82  DGKRIAFMSNRDGHR--SIYTMSALGGDVKRITHHSGNSH 119



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 69/230 (30%), Gaps = 16/230 (6%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP S R IA   + +++           +    ++ +        +  VMD    N
Sbjct: 472 SYEWSPDS-RWIAFGYTPNVHAPFGDVGLVRATGGEVINLTNTGYFSDLTGWVMD---GN 527

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
               T  R  +     +       A+  + +      + M         R G       A
Sbjct: 528 AILFTSDRYGMRNHASW--GSMSDAFLVFLNRKAYEKFSMTPEERDLYDRAGLDTLQYGA 585

Query: 263 -PRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFE 319
            P  + +      S +K +      V++Q       RLT        A    D   + + 
Sbjct: 586 EPVPAED------SAKKKDETKPIVVEIQGIEDRIVRLTPNSSDLADAYVDADGKNLYYL 639

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S  EG   L+       +   + Q   +       +P+GD I F   SG 
Sbjct: 640 SAFEGGYNLWQTDLREGNTSMLRQLDLSGSAYMRPTPKGDKI-FVMSSGR 688


>gi|21244171|ref|NP_643753.1| hypothetical protein XAC3446 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21109805|gb|AAM38289.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 784

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 53/232 (22%), Positives = 98/232 (42%), Gaps = 13/232 (5%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               +  +       P  SP+   VAYA+   +      L+ T  +  P+ +      + 
Sbjct: 221 RPYQVITAGGGFDLTPSLSPDGAMVAYASLTGDRAGTSILVKTTDNAYPRVLETPGPGVS 280

Query: 262 A--PRFSSNGKRALISVQK-DEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQI 316
              P +S +G++   S Q  D +  I        A  R  +       +S S+SPD   +
Sbjct: 281 DRLPAWSPDGRQIAFSRQAPDGSCRIMIAAATGPAASRELVRCDGADMLSFSWSPDGRAL 340

Query: 317 VFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFA 372
           VF S     G  ++  +       + +    +A  FD  P +SP G+ I F + + +   
Sbjct: 341 VFGSMTGTRGAVRMRRLDLATRQWQALDYPAQAGDFDYAPRYSPDGNWIVFLR-NPQLGD 399

Query: 373 IGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +  +  +G   ERL  ++++++  +W P G  LIF R+ D +  ++LY +DL
Sbjct: 400 LWRIPAEGGVAERLTHDNADIRGWSWLPDGSGLIFGRRVDSE--ARLYRLDL 449



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 55/316 (17%), Positives = 103/316 (32%), Gaps = 58/316 (18%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           S+       S+ V   D A  R L TP        P +SP+ +++A++    +   R+ +
Sbjct: 249 SLTGDRAGTSILVKTTDNAYPRVLETPGPGVSDRLPAWSPDGRQIAFSRQAPDGSCRIMI 308

Query: 242 MDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERL- 297
                  A + +       + +  +S +G+  +         A+ +  +DL +   + L 
Sbjct: 309 AAATGPAASRELVRCDGADMLSFSWSPDGRALVFGSMTGTRGAVRMRRLDLATRQWQALD 368

Query: 298 --TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                   + +  YSPD + IVF  + +    L+ + + G   +R++ D  A      W 
Sbjct: 369 YPAQAGDFDYAPRYSPDGNWIVFLRNPQ-LGDLWRIPAEGGVAERLTHD-NADIRGWSWL 426

Query: 356 PQGDLIAFTKFSGEKFAIGVMKK------------------------------------- 378
           P G  + F +    +  +  +                                       
Sbjct: 427 PDGSGLIFGRRVDSEARLYRLDLRDHSLHDVGVDDAQAPDVAHGHLVFVQRKPQFGVYQV 486

Query: 379 -----DGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR---NE 428
                +G   + RL         P  +P GR LIF+  + G  G     +   G     E
Sbjct: 487 IGDTMNGGYIRRRLFPSSGRDDQPMIAPDGRQLIFASNRSGAYGLWWGDVSKPGSVRLIE 546

Query: 429 TLINTPAYASDPQWVG 444
            L      A+D  W  
Sbjct: 547 GLRPDSRQAAD--WSA 560



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 21/176 (11%)

Query: 292 NATER----LTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQD 344
            + +R    +T     +++ S SPD + + + S   DR G   L     N   +   +  
Sbjct: 217 GSPKRPYQVITAGGGFDLTPSLSPDGAMVAYASLTGDRAGTSILVKTTDNAYPRVLETPG 276

Query: 345 KEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPS 400
              S   P WSP G  IAF++ +      I +    G   S+E +  + +++ + +WSP 
Sbjct: 277 PGVSDRLPAWSPDGRQIAFSRQAPDGSCRIMIAAATGPAASRELVRCDGADMLSFSWSPD 336

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA----------YASDPQWVGFM 446
           GR+L+F          ++  +DL  R    ++ PA          Y+ D  W+ F+
Sbjct: 337 GRALVFGSMTGTRGAVRMRRLDLATRQWQALDYPAQAGDFDYAPRYSPDGNWIVFL 392



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 84/292 (28%), Gaps = 52/292 (17%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-ED 235
           ++F S +   G ++     +                  + PR+SP+   + +       D
Sbjct: 340 LVFGSMTGTRGAVRMRRLDLATRQWQALDYPAQAGDFDYAPRYSPDGNWIVFLRNPQLGD 399

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ----- 290
           + R+           +R+ +  + I    +  +G   +   + D    +Y +DL+     
Sbjct: 400 LWRI----PAEGGVAERLTHDNADIRGWSWLPDGSGLIFGRRVDSEARLYRLDLRDHSLH 455

Query: 291 --------------------------------------SNATERLTNTLFINISASYSPD 312
                                                      RL  +   +     +PD
Sbjct: 456 DVGVDDAQAPDVAHGHLVFVQRKPQFGVYQVIGDTMNGGYIRRRLFPSSGRDDQPMIAPD 515

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKF 371
             Q++F S+R G   L+    +     R+ +  +  S     WS     +  +       
Sbjct: 516 GRQLIFASNRSGAYGLWWGDVSKPGSVRLIEGLRPDSRQAADWSADSQRVLVSGSDAAGH 575

Query: 372 A--IGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
           A    V    G   RL V           P   R L+ +   DG T + LY 
Sbjct: 576 AALFEVTPGSGQVVRLPVPQPRPLQAIHLPDPHRLLVLAAADDGHTFATLYD 627


>gi|190575753|ref|YP_001973598.1| putative transcriptional regulator [Stenotrophomonas maltophilia
           K279a]
 gi|190013675|emb|CAQ47310.1| putative transcriptional regulator [Stenotrophomonas maltophilia
           K279a]
          Length = 776

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 58/320 (18%), Positives = 111/320 (34%), Gaps = 21/320 (6%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           D      I  +   ++PA    +    + D + S + +       I F       G    
Sbjct: 244 DGAGGGVIKVQTSGNAPARQLALPPKGASDRFPSWSPDG----REIAFARFGADGG---C 296

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +    G  +R  T      L    ++P+ + + + +       R   +        +
Sbjct: 297 QVLIASATGGGVRQATRCDGTELLSFDWTPDGRGLVFGSMVGRYAHRGIRVLDLASGQWR 356

Query: 252 RIG---NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            +    +      APR+S +GK  +  V+  +  D++ +       E+LTN        +
Sbjct: 357 ALDYAVDQDDFDYAPRYSPDGKWLVF-VRNPQMGDLWRMPAGGGELEQLTNESAEQRGWA 415

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +  D   IVF    + + +LY +     +++ +          P  S  GD++AF     
Sbjct: 416 WLGDGRSIVFGRRVDSEVRLYYLDV---ERRTLRDAGLDDAQWPAVSRHGDVLAFVHRRA 472

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +     V    GS ERL         P  +P GR L+F+  + G     L+  D+  R +
Sbjct: 473 QFGVFKVPMAGGSAERLFASSGRDGQPMAAPDGRQLVFTSDRSGSFA--LWWADMQ-RPD 529

Query: 429 TLINTPAYASD----PQWVG 444
           +L        +    P W  
Sbjct: 530 SLRPIEGLRPEGRQAPDWSA 549



 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 91/252 (36%), Gaps = 17/252 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFR-- 257
                L  +       P  SP+  +VAY    +D     V  + T  +   +++      
Sbjct: 211 QRPYRLITATSGFETYPTLSPDGSQVAYEGANEDGAGGGVIKVQTSGNAPARQLALPPKG 270

Query: 258 SMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQ 315
           +    P +S +G+    +    D    +           + T       +S  ++PD   
Sbjct: 271 ASDRFPSWSPDGREIAFARFGADGGCQVLIASATGGGVRQATRCDGTELLSFDWTPDGRG 330

Query: 316 IVFES--DREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +VF S   R     + V+       + +    D++   + P +SP G  + F + + +  
Sbjct: 331 LVFGSMVGRYAHRGIRVLDLASGQWRALDYAVDQDDFDYAPRYSPDGKWLVFVR-NPQMG 389

Query: 372 AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +  M   G +   L  +S  Q    W   GRS++F R+ D +   +LY +D+    E  
Sbjct: 390 DLWRMPAGGGELEQLTNESAEQRGWAWLGDGRSIVFGRRVDSEV--RLYYLDV----ERR 443

Query: 431 INTPAYASDPQW 442
               A   D QW
Sbjct: 444 TLRDAGLDDAQW 455



 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 74/211 (35%), Gaps = 16/211 (7%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---TERLTNTL-- 301
            R  + I         P  S +G +       ++      + +Q++      +L      
Sbjct: 211 QRPYRLITATSGFETYPTLSPDGSQVAYEGANEDGAGGGVIKVQTSGNAPARQLALPPKG 270

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             +   S+SPD  +I F     +G  Q+ +  + G   ++ ++          W+P G  
Sbjct: 271 ASDRFPSWSPDGREIAFARFGADGGCQVLIASATGGGVRQATRCDGTELLSFDWTPDGRG 330

Query: 361 IAFTKFSGEKFA--IGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           + F    G      I V+     Q R L     +D    AP +SP G+ L+F R      
Sbjct: 331 LVFGSMVGRYAHRGIRVLDLASGQWRALDYAVDQDDFDYAPRYSPDGKWLVFVRN---PQ 387

Query: 415 GSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
              L+ +   G   E L N  A      W+G
Sbjct: 388 MGDLWRMPAGGGELEQLTNESAEQRGWAWLG 418



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 17/169 (10%)

Query: 295 ERLTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRIS-QDKEASYF 350
             +T T       + SPD SQ+ +E    D  G   + V  S  +  ++++   K AS  
Sbjct: 215 RLITATSGFETYPTLSPDGSQVAYEGANEDGAGGGVIKVQTSGNAPARQLALPPKGASDR 274

Query: 351 DPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFS 407
            P WSP G  IAF +F +     + +    G   R     + + L +  W+P GR L+F 
Sbjct: 275 FPSWSPDGREIAFARFGADGGCQVLIASATGGGVRQATRCDGTELLSFDWTPDGRGLVFG 334

Query: 408 RKKDGDTGSKLYSIDLNGRNETLIN----------TPAYASDPQWVGFM 446
                     +  +DL       ++           P Y+ D +W+ F+
Sbjct: 335 SMVGRYAHRGIRVLDLASGQWRALDYAVDQDDFDYAPRYSPDGKWLVFV 383


>gi|162456252|ref|YP_001618619.1| hypothetical protein sce7969 [Sorangium cellulosum 'So ce 56']
 gi|161166834|emb|CAN98139.1| hypothetical protein sce7969 [Sorangium cellulosum 'So ce 56']
          Length = 1017

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 67/187 (35%), Gaps = 6/187 (3%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG        +       P  SP    VA++              +R     +R     
Sbjct: 418 PDGDEPWRRRLTHGLRSAAPDVSPTGDLVAFSLNSKGTRYLEIARLSRDGALSERRDLVP 477

Query: 258 S----MILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           S       +P FS +GKR   SV       DI  VD+ +    ++T     +++  +SPD
Sbjct: 478 SARFEQAYSPSFSPDGKRLAYSVWTAGGYRDIRVVDVATGGFRQVTRDRATDMNPVWSPD 537

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              + F SDR G   +Y    +    ++++  +  +   P  SP G  + +  ++     
Sbjct: 538 GETLYFTSDRTGIHNVYAYDVSSGALRQVTNVRLGAL-HPAISPDGKTLVYVGYTSRGHD 596

Query: 373 IGVMKKD 379
           +  M  D
Sbjct: 597 LFAMPLD 603



 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 107/335 (31%), Gaps = 32/335 (9%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE--KGDFNSRILFVSESVVS 186
           RL+    R+Q+   +        R   H   + +Y        +      I++  +    
Sbjct: 297 RLY----REQMAAVEARGLREGARLTYHGR-NVLYPRFVPPAARRTAADEIVYFRDDGRE 351

Query: 187 GIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM--- 242
                 + +     G+       +R      P F+P    V  A     +      +   
Sbjct: 352 RPGIYRVSLAAPAPGSERHEALVARTNAPSRPAFTPAGDLVFTALLPWRNHYYRNDLVML 411

Query: 243 -----DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATE 295
                    D   +R         AP  S  G     S+       ++I  +      +E
Sbjct: 412 PRGEAAPDGDEPWRRRLTHGLRSAAPDVSPTGDLVAFSLNSKGTRYLEIARLSRDGALSE 471

Query: 296 R---LTNTLFIN-ISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           R   + +  F    S S+SPD  ++ +      G   + V+       +++++D+ A+  
Sbjct: 472 RRDLVPSARFEQAYSPSFSPDGKRLAYSVWTAGGYRDIRVVDVATGGFRQVTRDR-ATDM 530

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRK 409
           +PVWSP G+ + FT        +          R +         P  SP G++L++   
Sbjct: 531 NPVWSPDGETLYFTSDRTGIHNVYAYDVSSGALRQVTNVRLGALHPAISPDGKTLVYVGY 590

Query: 410 KDGDTGSKLYSIDLNGRNETLINTP---AYASDPQ 441
                G  L+++ L+      +  P       DP 
Sbjct: 591 TS--RGHDLFAMPLD--PARFLPAPPPSGDRPDPA 621


>gi|237715132|ref|ZP_04545613.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262408917|ref|ZP_06085462.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294648224|ref|ZP_06725761.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294810023|ref|ZP_06768697.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|229444965|gb|EEO50756.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262353128|gb|EEZ02223.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292636412|gb|EFF54893.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294442869|gb|EFG11662.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 1119

 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 80/236 (33%), Gaps = 34/236 (14%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            + + R SP+  ++ +      DI +V            ++    S    P +S +GK+ 
Sbjct: 24  WMRDARISPDGSEIVFCY--KGDIYKVPAQ----GGTAVQLTTQTSYEANPVWSPDGKQI 77

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
             +  ++   D++ +     A  RLT      I ++++PD   + F +            
Sbjct: 78  AFASDRNGNFDLFIMPADGGAARRLTYHSASEIPSTFTPDGKYVFFSASIQDPASSALFP 137

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGE 369
                +LY +   G   +++     A       +  G    +               S  
Sbjct: 138 TGAMTELYKVPVAGGRTEQVL-GTPAELVCFDKT--GKNFLYQDRKGFEDEWRKHHTSSI 194

Query: 370 KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              I +      +   L       + P ++P G ++ F  ++DG +   +Y+  LN
Sbjct: 195 TRDIWLYNTQTGKHTNLTNRGGEDRNPVYAPDGNAIYFLSERDGGS-FNVYTFSLN 249



 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 34/221 (15%)

Query: 252 RIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +    S  + P +      S +G   +   + D    IY V  Q     +LT       
Sbjct: 11  VLSALSSYAITPLWMRDARISPDGSEIVFCYKGD----IYKVPAQGGTAVQLTTQTSYEA 66

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  +SPD  QI F SDR G   L++M ++G   +R++    AS     ++P G  + F+ 
Sbjct: 67  NPVWSPDGKQIAFASDRNGNFDLFIMPADGGAARRLTY-HSASEIPSTFTPDGKYVFFSA 125

Query: 366 F-----------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--- 411
                       +G    +  +   G +   ++     +   +  +G++ ++  +K    
Sbjct: 126 SIQDPASSALFPTGAMTELYKVPVAGGRTEQVLGTP-AELVCFDKTGKNFLYQDRKGFED 184

Query: 412 -------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                        ++  +   G++  L N      +P +  
Sbjct: 185 EWRKHHTSSITRDIWLYNTQTGKHTNLTNRGGEDRNPVYAP 225



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 52/310 (16%), Positives = 98/310 (31%), Gaps = 81/310 (26%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM------- 259
             +R      P ++P+   + + +  D     VY       +  K +  F++        
Sbjct: 211 LTNRGGEDRNPVYAPDGNAIYFLSERDGGSFNVYTFSLNTPQEVKAMTTFKTHPVRFLSV 270

Query: 260 ----------------------------------------------ILAPRFSSNGKRAL 273
                                                           +   S +GK+  
Sbjct: 271 SDKGTLCYTYDGELYTQKSGARPEKVKVELVRDDEQQLATLKFSQGATSASVSPDGKQIA 330

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM-- 331
             V+ D    ++        T+++TNT     + S++PD+  +V+ S+R G  QLY    
Sbjct: 331 FIVRGD----VFVTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASERTGNWQLYTAKI 386

Query: 332 ---------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                     +   +++ +   K      P +SP G  +AF +       + V+     +
Sbjct: 387 SRKEDPNFPNATLIEEEVLLPSKTVERTYPQYSPDGKELAFIEDRN---RLMVLNLKTKK 443

Query: 383 ERLLVEDSNLQ------APTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            R + + S            WSP G+   L F   +  D  S +  +   G   T +   
Sbjct: 444 VRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRH-DPYSDVGIVSAQGGAITNLTNS 502

Query: 435 AYAS-DPQWV 443
            Y S  P+WV
Sbjct: 503 GYISGAPRWV 512



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 76/215 (35%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A+    D        + +      K+I N  +   A  F+ + +  + + +
Sbjct: 321 SVSPDGKQIAFIVRGD------VFVTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN------------ISASYSPDSSQIVFESDREGK 325
           +     +Y+  +         N   I                 YSPD  ++ F  DR   
Sbjct: 375 RTGNWQLYTAKISRKEDPNFPNATLIEEEVLLPSKTVERTYPQYSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  +G++  
Sbjct: 432 NRLMVLNLKTKKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDVGIVSA 491

Query: 379 DGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G     L     +  AP W   G +++F  ++ G
Sbjct: 492 QGGAITNLTNSGYISGAPRWVLDGNAILFQTERYG 526



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 78/234 (33%), Gaps = 32/234 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +       
Sbjct: 41  YKGDIYKVPAQGGTAVQLTTQTS-YEANPVWSPDGKQIAFASDRNGNFDLFIM--PADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERL 297
           A +R+    +  +   F+ +GK    S                  ++Y V +    TE++
Sbjct: 98  AARRLTYHSASEIPSTFTPDGKYVFFSASIQDPASSALFPTGAMTELYKVPVAGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  +       ++  
Sbjct: 158 LGTPAELV--CFDKTGKNFLYQ-DRKGFEDEWRKHHTSSITRDIWLYNTQTGKHTNLTNR 214

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 +PV++P G+ I F ++  G  F +     +  QE   +         +
Sbjct: 215 G-GEDRNPVYAPDGNAIYFLSERDGGSFNVYTFSLNTPQEVKAMTTFKTHPVRF 267



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 85/220 (38%), Gaps = 22/220 (10%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK     V   ++ V        K+  ++PA    ++    +      +   G+
Sbjct: 320 ASVSPDGKQIAFIVRGDVF-VTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASERTGN 378

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +      +S          +L            L PS+      P++SP+ +++A+    
Sbjct: 379 WQLYTAKISRKEDPNFPNATLI-------EEEVLLPSKTVERTYPQYSPDGKELAFI--- 428

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRA---LISVQKDEAMDI 284
            ED  R+ +++ +  +  +++ +              +S +GK      I  + D   D+
Sbjct: 429 -EDRNRLMVLNLKT-KKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDV 486

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
             V  Q  A   LTN+ +I+ +  +  D + I+F+++R G
Sbjct: 487 GIVSAQGGAITNLTNSGYISGAPRWVLDGNAILFQTERYG 526


>gi|268317858|ref|YP_003291577.1| peptidase S41 [Rhodothermus marinus DSM 4252]
 gi|262335392|gb|ACY49189.1| peptidase S41 [Rhodothermus marinus DSM 4252]
          Length = 1067

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/196 (25%), Positives = 75/196 (38%), Gaps = 21/196 (10%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P    +G++ + S Q D    ++ V +     +RLT          +SPD  +I F SDR
Sbjct: 23  PAIDPSGQQIVFSYQGD----LWLVPVTGGMAQRLTVHPAYEAYPRWSPDGRRIAFTSDR 78

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-----AFTKFSGEKFAIGVMK 377
            G + L+VM+  GS  +R++    A      W+  G L+      F +   E     +  
Sbjct: 79  YGHDDLFVMELFGSPPRRLTY-HSADDILTDWTRDGRLLFQTRRLFVQVEREAEIHAIPD 137

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--------GDTGSKLYSIDL-NGRNE 428
             G+  R+L         T SP GR L F R  +        G     L+  DL N    
Sbjct: 138 TGGTPVRILDATGFQA--TLSPDGRFLAFERGSNATWRQGYRGSADRDLWLFDLQNHTFR 195

Query: 429 TLINTPAYASDPQWVG 444
            L +       P W G
Sbjct: 196 RLTDFDGNDYLPAWAG 211



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 97/245 (39%), Gaps = 37/245 (15%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P   P+ Q++ ++   D        +        +R+    +    PR+S +G+R   +
Sbjct: 22  YPAIDPSGQQIVFSYQGD------LWLVPVTGGMAQRLTVHPAYEAYPRWSPDGRRIAFT 75

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-----EGKEQLYV 330
             +    D++ ++L  +   RLT     +I   ++ D  +++F++ R     E + +++ 
Sbjct: 76  SDRYGHDDLFVMELFGSPPRRLTYHSADDILTDWTRDG-RLLFQTRRLFVQVEREAEIHA 134

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----------IGVMKKDG 380
           +   G    RI    +A+ F    SP G  +AF + S   +           + +     
Sbjct: 135 IPDTGGTPVRIL---DATGFQATLSPDGRFLAFERGSNATWRQGYRGSADRDLWLFDLQN 191

Query: 381 SQERLLVE-DSNLQAPTWS-PSGRSLIFSRKKDGDTGSKLYSIDLN------GRNETLIN 432
              R L + D N   P W+ P  R+L+F  ++DG     LY + LN      G  E L +
Sbjct: 192 HTFRRLTDFDGNDYLPAWAGP--RTLLFISERDGT--YNLYRLPLNEDGTPQGAPEQLTH 247

Query: 433 TPAYA 437
                
Sbjct: 248 FEGDG 252



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 60/345 (17%), Positives = 118/345 (34%), Gaps = 54/345 (15%)

Query: 145 FSSPASWRKIAHTISDD----------IYQSITGEKG-----DFNSRILFVSESVVSGII 189
             S A+WR+     +D            ++ +T   G      +      +  S   G  
Sbjct: 166 RGSNATWRQGYRGSADRDLWLFDLQNHTFRRLTDFDGNDYLPAWAGPRTLLFISERDGTY 225

Query: 190 KNSLCVMDRDGAN---IRYLTPSRDQILFEPRFSPNQQKVAYATY----------DDEDI 236
                 ++ DG        LT      +     S + + +A+                  
Sbjct: 226 NLYRLPLNEDGTPQGAPEQLTHFEGDGVRYFTVSADGRTIAFERQTDLYVLTLPEGTPRR 285

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           L + +         +R   F S       S +G+     V+    + +   D   N T R
Sbjct: 286 LEIQIPYDERFDPVERRT-FTSEATEYALSPDGRYVAFVVR--GELFLRRNDPDDNRTVR 342

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-----------RISQDK 345
           LT   + +   ++  D S +VF SDR G+  LY++++  +              R++ D 
Sbjct: 343 LTRHPWRDREPAWLND-STLVFVSDRAGQYDLYLLRAADAGTSDLFESLTHTVVRLT-DT 400

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                +PV +P G  + F +  G    + + + +G + R+        +  +   WSP  
Sbjct: 401 PEDEREPVVAPDGRHLVFRRGRGT---LLLARIEGDRLRITRTLLDGWATPEDVAWSPDS 457

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETL--INTPAYASDPQWVG 444
           R + +S   D D  +++Y   ++G +  +     P   + P W  
Sbjct: 458 RWIAYS-LPDLDFNTEVYIQPIDGSHPPINVSQHPRPDTHPVWSP 501



 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 55/354 (15%), Positives = 104/354 (29%), Gaps = 88/354 (24%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
              +       +  S   +    +  L ++   G   + LT         PR+SP+ +++
Sbjct: 14  FNPRPFPRYPAIDPSGQQIVFSYQGDLWLVPVTGGMAQRLTV-HPAYEAYPRWSPDGRRI 72

Query: 227 AYATYDDE-----------------------DILRVYLMDTR------------------ 245
           A+ +                           DIL  +  D R                  
Sbjct: 73  AFTSDRYGHDDLFVMELFGSPPRRLTYHSADDILTDWTRDGRLLFQTRRLFVQVEREAEI 132

Query: 246 -----IDRAPKRIGNFRSMILAPRFSSNGKRALIS----------VQKDEAMDIYSVDLQ 290
                    P RI +          S +G+                +     D++  DLQ
Sbjct: 133 HAIPDTGGTPVRILDATG--FQATLSPDGRFLAFERGSNATWRQGYRGSADRDLWLFDLQ 190

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-----SDQKRISQDK 345
           ++   RLT+    +   +++     ++F S+R+G   LY +  N         ++++  +
Sbjct: 191 NHTFRRLTDFDGNDYLPAWA-GPRTLLFISERDGTYNLYRLPLNEDGTPQGAPEQLTHFE 249

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----------------VED 389
                    S  G  IAF + +     + V+       R L                   
Sbjct: 250 GDGVRYFTVSADGRTIAFERQTD----LYVLTLPEGTPRRLEIQIPYDERFDPVERRTFT 305

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           S       SP GR + F  +  G+   +    D + R   L   P    +P W+
Sbjct: 306 SEATEYALSPDGRYVAFVVR--GELFLRRNDPD-DNRTVRLTRHPWRDREPAWL 356



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 78/220 (35%), Gaps = 26/220 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + VA+    +  + R    D R      R+         P + ++    +    
Sbjct: 312 ALSPDGRYVAFVVRGELFLRRNDPDDNRT----VRLTRHPWRDREPAWLND-STLVFVSD 366

Query: 278 KDEAMDIYSVDLQ-----------SNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +    D+Y +              ++   RLT+T         +PD   +VF   R G+ 
Sbjct: 367 RAGQYDLYLLRAADAGTSDLFESLTHTVVRLTDTPEDEREPVVAPDGRHLVF---RRGRG 423

Query: 327 QLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQ 382
            L + +  G D+ RI++   D  A+  D  WSP    IA++         + +   DGS 
Sbjct: 424 TLLLARIEG-DRLRITRTLLDGWATPEDVAWSPDSRWIAYSLPDLDFNTEVYIQPIDGSH 482

Query: 383 ERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             + V         P WSP G  L F   +        ++
Sbjct: 483 PPINVSQHPRPDTHPVWSPDGSKLAFLSPRSSGDVDVWFA 522



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 82/248 (33%), Gaps = 50/248 (20%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTR 245
             + +L +   +G  +R      D         +SP+ + +AY+  D +    VY+    
Sbjct: 420 RGRGTLLLARIEGDRLRITRTLLDGWATPEDVAWSPDSRWIAYSLPDLDFNTEVYIQPID 479

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISV----------------------------- 276
               P  +         P +S +G +                                  
Sbjct: 480 GSHPPINVSQHPRPDTHPVWSPDGSKLAFLSPRSSGDVDVWFAWLRRADWERTEEEWEAL 539

Query: 277 -------QKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                  ++D       +DL+       R+T         + S D     F ++R G+ Q
Sbjct: 540 EKQSDRKRRDTLTGPIQIDLERIHERLRRVTALPGNEAELAVSKDGETFYFVANRGGRTQ 599

Query: 328 -------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  LY ++ +GS+ KR++ + +        S  G  + F + SG+   + +  ++G
Sbjct: 600 DYEAEVDLYRIRWDGSELKRLT-ENDTDPRQVRLSRDGKYLFFLRPSGQL--VRLNPENG 656

Query: 381 SQERLLVE 388
            QE L  E
Sbjct: 657 RQETLRFE 664



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 7/92 (7%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPS 400
           + +       P   P G  I F+        + ++   G   + L    +    P WSP 
Sbjct: 13  TFNPRPFPRYPAIDPSGQQIVFSYQGD----LWLVPVTGGMAQRLTVHPAYEAYPRWSPD 68

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           GR + F+  + G     L+ ++L G     + 
Sbjct: 69  GRRIAFTSDRYGH--DDLFVMELFGSPPRRLT 98


>gi|32564217|ref|NP_871957.1| Temporarily Assigned Gene name family member (tag-10)
           [Caenorhabditis elegans]
 gi|25809201|emb|CAD57688.1| C. elegans protein C31C9.1b, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|25809224|emb|CAD57698.1| C. elegans protein C31C9.1b, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 455

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 81/208 (38%), Gaps = 32/208 (15%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           R     +R+ +          S +G +   +  +   +++Y +D+      ++TN L  +
Sbjct: 203 RYGNFVQRLTDSPGYDAEGVVSPDGTKIAFTSIRSGDLELYIMDIDGKNLIQITNELGYD 262

Query: 305 ISASYSPDSSQIVFESDREGK--------------------EQLYVMQSNGSDQKRISQD 344
             + ++PD  +++F + R                        +L+++  +G + ++I+  
Sbjct: 263 GGSFFTPDGKRLIFRASRPKNETEIAKYKKLLSYNLVEPIAMELFIVDIDGQNLRKITNL 322

Query: 345 KEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTW- 397
            EA++   + +     I F+            F++ ++  DG+  + +      Q  ++ 
Sbjct: 323 GEANWAPYMLN-DNKRIIFSSNYDTAANGFGAFSLYMVNDDGTGLQQIT-FGQNQFNSFA 380

Query: 398 --SPSGRSLIFSRKKDGDT-GSKLYSID 422
             S  G+ L++   ++G      L+  D
Sbjct: 381 MQSYDGKKLVWGSSRNGTMYELNLFIAD 408



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 26/176 (14%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DI+ VD   N  +RLT++   +     SPD ++I F S R G  +LY+M  +G +  +I
Sbjct: 196 YDIFKVDRYGNFVQRLTDSPGYDAEGVVSPDGTKIAFTSIRSGDLELYIMDIDGKNLIQI 255

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEK--------------------FAIGVMKKDGS 381
           + +         ++P G  + F     +                       + ++  DG 
Sbjct: 256 TNEL-GYDGGSFFTPDGKRLIFRASRPKNETEIAKYKKLLSYNLVEPIAMELFIVDIDGQ 314

Query: 382 QERLLVEDS-NLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLIN 432
             R +        AP      + +IFS   D    G     LY ++ +G     I 
Sbjct: 315 NLRKITNLGEANWAPYMLNDNKRIIFSSNYDTAANGFGAFSLYMVNDDGTGLQQIT 370



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 82/217 (37%), Gaps = 30/217 (13%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              +  +DR G N             E   SP+  K+A+ +    D L +Y+MD    + 
Sbjct: 195 DYDIFKVDRYG-NFVQRLTDSPGYDAEGVVSPDGTKIAFTSIRSGD-LELYIMDID-GKN 251

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEA--------------------MDIYSVDL 289
             +I N         F+ +GKR +    + +                     M+++ VD+
Sbjct: 252 LIQITNELGYDGGSFFTPDGKRLIFRASRPKNETEIAKYKKLLSYNLVEPIAMELFIVDI 311

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQ 343
                 ++TN    N +     D+ +I+F S+ +      G   LY++  +G+  ++I+ 
Sbjct: 312 DGQNLRKITNLGEANWAPYMLNDNKRIIFSSNYDTAANGFGAFSLYMVNDDGTGLQQITF 371

Query: 344 DKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKD 379
            +       + S  G  + + +  +G  + + +   D
Sbjct: 372 GQNQFNSFAMQSYDGKKLVWGSSRNGTMYELNLFIAD 408



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/282 (17%), Positives = 94/282 (33%), Gaps = 41/282 (14%)

Query: 195 VMDRDG----ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRID-- 247
           V+  DG    AN++ LT           FS +  K+         D  ++Y +D  ID  
Sbjct: 61  VVHFDGETHLANVKQLTFGGMNAEGY--FSFDNSKLTLQATGYGTDCDQIYELDLNIDPR 118

Query: 248 -RAPKRIGNFRSMILAPRF--SSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFI 303
            +  +RI           F   ++    L +          + D+      ++  N    
Sbjct: 119 LQTLRRISTGLGATTCSYFYKEADNNHRLYAGNWWNVKVDNTTDVSKTCPPKQCANPQTD 178

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +    +       +  D      ++ +   G+  +R++ D      + V SP G  IAF
Sbjct: 179 ELKHLCNTS-----YTWDIFADYDIFKVDRYGNFVQRLT-DSPGYDAEGVVSPDGTKIAF 232

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGS------ 416
           T        + +M  DG     +  +        ++P G+ LIF   +  +         
Sbjct: 233 TSIRSGDLELYIMDIDGKNLIQITNELGYDGGSFFTPDGKRLIFRASRPKNETEIAKYKK 292

Query: 417 ------------KLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                       +L+ +D++G+N   I     A+   W  +M
Sbjct: 293 LLSYNLVEPIAMELFIVDIDGQNLRKITNLGEAN---WAPYM 331


>gi|332300275|ref|YP_004442196.1| peptidase S41 [Porphyromonas asaccharolytica DSM 20707]
 gi|332177338|gb|AEE13028.1| peptidase S41 [Porphyromonas asaccharolytica DSM 20707]
          Length = 1095

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 75/211 (35%), Gaps = 33/211 (15%)

Query: 262 APRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            PR+      S +G +     Q D    IY VD        LT +       ++SPD  +
Sbjct: 30  TPRWLRYAQISPDGNQIAFCYQGD----IYIVDAIGGEARLLTGSDGYESHPTWSPDGKR 85

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           I F S+R+G   +Y M + G D KRI+     S+    ++P G  I  +           
Sbjct: 86  IAFMSNRDGHRSIYTMSALGGDVKRITHHSGNSHTVECYTPDGRFIIMSESLQQPATSAL 145

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG-RSLI---------FSRKKDGDT 414
             SG    + ++  DG    +L     L+A T+S  G R +          + +      
Sbjct: 146 NPSGILSQLYMIPVDGGTP-MLYNARPLEAVTFSHRGDRYVAQDIKGFENKWRKHHTSSV 204

Query: 415 GSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
              +Y +D   G        P     P +  
Sbjct: 205 TRDIYIVDPKTGATTACTLEPGEDLSPVFGP 235



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 55/303 (18%), Positives = 109/303 (35%), Gaps = 38/303 (12%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           + ++   G  +  + F+SE   S  +   +          + +T  R+  +     S + 
Sbjct: 227 EDLSPVFGPDDQTVFFISERGKSNSLN--VWKQRIGEQTAQQVTSFRNHPVRFLSISRSG 284

Query: 224 Q-KVAY----ATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +   AY     T  +    +   +  R     D+  +R  +       P  SS+GK+   
Sbjct: 285 RLCFAYDGDLYTMTEGRSPQKVQITLRTEGPKDKVYRRTASSGGSSFTP--SSDGKQLAF 342

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            ++ D    +Y   ++   T+R+T +     S ++SPDS  +V++S R+GK  LY     
Sbjct: 343 IMRGD----VYVTSVEHGTTKRITQSAGAEESVTWSPDSKTLVYDSRRDGKHILYKATIA 398

Query: 335 GS-----------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                         ++ +  + +     P +SP G LIAF    G++  I     +  + 
Sbjct: 399 SDKELDFASATIIKEEPLMPECKMEQALPQYSPDGKLIAFV---GDRKRIYTYNVESKKL 455

Query: 384 RLLVEDSN------LQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAY 436
             +    +        +  WSP  R + F    +       +  +   G     +    Y
Sbjct: 456 TQVTSGKDQPEMHGYISYEWSPDSRWIAFGYTPNVHAPFGDVGLVRATGGEVINLTNTGY 515

Query: 437 ASD 439
            SD
Sbjct: 516 FSD 518



 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 79/236 (33%), Gaps = 44/236 (18%)

Query: 217 PRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           PR+      SP+  ++A+    D     +Y++D  I    + +         P +S +GK
Sbjct: 31  PRWLRYAQISPDGNQIAFCYQGD-----IYIVD-AIGGEARLLTGSDGYESHPTWSPDGK 84

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVF--------ES- 320
           R      +D    IY++       +R+T+     +    Y+PD   I+          S 
Sbjct: 85  RIAFMSNRDGHRSIYTMSALGGDVKRITHHSGNSHTVECYTPDGRFIIMSESLQQPATSA 144

Query: 321 -DREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------ 372
            +  G   QLY++  +G                  +S +GD   +     + F       
Sbjct: 145 LNPSGILSQLYMIPVDGGTP---MLYNARPLEAVTFSHRGDR--YVAQDIKGFENKWRKH 199

Query: 373 --------IGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                   I ++           +E     +P + P  +++ F  ++       ++
Sbjct: 200 HTSSVTRDIYIVDPKTGATTACTLEPGEDLSPVFGPDDQTVFFISERGKSNSLNVW 255



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/335 (12%), Positives = 105/335 (31%), Gaps = 88/335 (26%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  + ++D  G   R L    D     P +SP+ +++A+ +  D     +Y M + +  
Sbjct: 50  YQGDIYIVDAIGGEAR-LLTGSDGYESHPTWSPDGKRIAFMSNRDGH-RSIYTM-SALGG 106

Query: 249 APKRIGNFRSMILAP-RFSSNGKRALIS----------VQKDEAM-DIYSVDLQSNAT-- 294
             KRI +          ++ +G+  ++S          +     +  +Y + +       
Sbjct: 107 DVKRITHHSGNSHTVECYTPDGRFIIMSESLQQPATSALNPSGILSQLYMIPVDGGTPML 166

Query: 295 -----------------------------------ERLTNTLFI---------------- 303
                                                +T  ++I                
Sbjct: 167 YNARPLEAVTFSHRGDRYVAQDIKGFENKWRKHHTSSVTRDIYIVDPKTGATTACTLEPG 226

Query: 304 -NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSP---- 356
            ++S  + PD   + F S+R     L V +    +Q  ++++  +         S     
Sbjct: 227 EDLSPVFGPDDQTVFFISERGKSNSLNVWKQRIGEQTAQQVTSFRNHPVRFLSISRSGRL 286

Query: 357 ----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGRSLIFSRKK 410
                GDL   T+    +     ++ +G ++++    ++    +++P   G+ L F  + 
Sbjct: 287 CFAYDGDLYTMTEGRSPQKVQITLRTEGPKDKVYRRTASSGGSSFTPSSDGKQLAFIMR- 345

Query: 411 DGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                  +Y   + +G  + +  +        W  
Sbjct: 346 -----GDVYVTSVEHGTTKRITQSAGAEESVTWSP 375



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
           ++Q+          SP G+ IAF         I ++   G + RLL   D     PTWSP
Sbjct: 26  VAQETPRWLRYAQISPDGNQIAFCYQGD----IYIVDAIGGEARLLTGSDGYESHPTWSP 81

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            G+ + F   +DG     +Y++   G +   I   +  S 
Sbjct: 82  DGKRIAFMSNRDGHR--SIYTMSALGGDVKRITHHSGNSH 119



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 63/225 (28%), Gaps = 15/225 (6%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP S R IA   + +++           +    ++ +        +  VM+    N
Sbjct: 472 SYEWSPDS-RWIAFGYTPNVHAPFGDVGLVRATGGEVINLTNTGYFSDLTGWVME---GN 527

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
               T  R  +     +       A+  + +      + M         R G       +
Sbjct: 528 AILFTSDRYGMRNHASW--GSMSDAFLVFLNRKAYEKFSMTPEERDLYDRAGLDTLQYGS 585

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFES 320
               ++         K +      V+++       RLT        A    D   + + S
Sbjct: 586 DPVPTD-------SAKKDETKPIIVEVKGIEDRIVRLTPNSSDLADAYVDADGKNLYYLS 638

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             EG   L+       +   + Q   +       +P+GD I    
Sbjct: 639 AFEGGYNLWQTDLREGNTSMLRQLDLSGSAYMRPTPKGDKIFVIS 683


>gi|328554924|gb|AEB25416.1| YuxL [Bacillus amyloliquefaciens TA208]
          Length = 694

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 61/316 (19%), Positives = 116/316 (36%), Gaps = 72/316 (22%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           R  +V   V       S  +M  D   G +  +     D     PR+SP+ +++A+ +  
Sbjct: 61  RAAYVRTKVNDKRDSYSSAIMVYDTESGTSNPWTF--GDNKNSSPRWSPDGRRLAFVSDR 118

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------- 277
           ++ + ++Y++D     A +        +  P ++ +G+  L+SV                
Sbjct: 119 EDGVPQLYIIDAAGGEAERAADIPWG-VADPIWAPDGRSVLVSVSLTSAERADEKEKKKQ 177

Query: 278 --------------KDE-------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                         +D           +  + L++   ++LT+    +  A++SPD  Q+
Sbjct: 178 DEYEPVNIQSLTYKRDGKGLLNGSWTQLVLIHLETGEIQQLTDHEADHFDAAFSPDGKQL 237

Query: 317 VFESD-----REGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            F ++       GK + +Y+M     D K+I+     S+   V+SP G  IA      E 
Sbjct: 238 AFTANLCEPGDAGKPRDVYLMNLADGDLKQITP-HSGSFGSCVFSPDGSYIALLGHENEF 296

Query: 371 FAIGVMKK---DGSQERL--LVE----------------DSNLQAPTWSPSGRSLIFSRK 409
               ++K    D   ERL  L +                      P W+  G+       
Sbjct: 297 RNATLVKAWLYDVKNERLSCLTDMLDVHLSDALIADSLIGGVTPRPVWTNDGQGFYVLGS 356

Query: 410 KDGDTGSKLYSIDLNG 425
           + G TG  +Y I ++G
Sbjct: 357 EQGSTG--IYYISIDG 370



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 98/268 (36%), Gaps = 54/268 (20%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM----ILAPRFSSNG 269
           + +P+++P+ ++ AY      D    Y     +        N  +       +PR+S +G
Sbjct: 50  VTDPQYAPDGRRAAYVRTKVNDKRDSYSSAIMVYDTESGTSNPWTFGDNKNSSPRWSPDG 109

Query: 270 KRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----------- 317
           +R      + D    +Y +D      ER  +  +      ++PD   ++           
Sbjct: 110 RRLAFVSDREDGVPQLYIIDAAGGEAERAADIPWGVADPIWAPDGRSVLVSVSLTSAERA 169

Query: 318 ------------------FESDREGKE-------QLYVMQSNGSDQKRISQDKEASYFDP 352
                                 R+GK        QL ++     + ++++ D EA +FD 
Sbjct: 170 DEKEKKKQDEYEPVNIQSLTYKRDGKGLLNGSWTQLVLIHLETGEIQQLT-DHEADHFDA 228

Query: 353 VWSPQGDLIAFTKF------SGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +SP G  +AFT        +G+   + +M   DG  +++     +  +  +SP G  + 
Sbjct: 229 AFSPDGKQLAFTANLCEPGDAGKPRDVYLMNLADGDLKQITPHSGSFGSCVFSPDGSYIA 288

Query: 406 FSRKKDGDTGSKL---YSIDLNGRNETL 430
               ++    + L   +  D+  +NE L
Sbjct: 289 LLGHENEFRNATLVKAWLYDV--KNERL 314



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 9/105 (8%)

Query: 348 SYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPS 400
           S  DP ++P G   A+ +            AI V   +          D+   +P WSP 
Sbjct: 49  SVTDPQYAPDGRRAAYVRTKVNDKRDSYSSAIMVYDTESGTSNPWTFGDNKNSSPRWSPD 108

Query: 401 GRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQWVG 444
           GR L F   ++ D   +LY ID   G  E   + P   +DP W  
Sbjct: 109 GRRLAFVSDRE-DGVPQLYIIDAAGGEAERAADIPWGVADPIWAP 152



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 27/167 (16%)

Query: 158 ISDDIYQSITGEKGDFNSRIL-----FVSESVVSGIIKNSLCV--MDRDGANIRYLTPSR 210
           ++D   + IT   G F S +      +++        +N+  V     D  N R    + 
Sbjct: 260 LADGDLKQITPHSGSFGSCVFSPDGSYIALLGHENEFRNATLVKAWLYDVKNERLSCLTD 319

Query: 211 ----------------DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
                             +   P ++ + Q   Y    ++    +Y +       P R+ 
Sbjct: 320 MLDVHLSDALIADSLIGGVTPRPVWTNDGQG-FYVLGSEQGSTGIYYISIDGLVYPIRLE 378

Query: 255 NFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNT 300
                  A  F  + K    + V+ +   ++YS+ L+    ++LTN 
Sbjct: 379 EEYVNGFA--FHPDQKSCIAVIVKPERPSELYSISLEDGEEKQLTNN 423


>gi|254881010|ref|ZP_05253720.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319640017|ref|ZP_07994744.1| peptidase/protease [Bacteroides sp. 3_1_40A]
 gi|254833803|gb|EET14112.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317388295|gb|EFV69147.1| peptidase/protease [Bacteroides sp. 3_1_40A]
          Length = 1084

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 119/334 (35%), Gaps = 41/334 (12%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D ++ K        +     R             ++   G   +   F   S  S   
Sbjct: 200 LYDSENGKH---TNLTAHAGEDRNPVFAPDGQTVYFLSERDGGTFNVYSFPISSPQSLKT 256

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
                V       +R+L+   +  L    ++ + +   Y     +   +V +   R D+ 
Sbjct: 257 -----VTHFKTHPVRFLSMGSNGTLC---YTYDGE--IYTQKQGDKPQKVKIDIIRDDQN 306

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
                NF +   +   S +GK+    V+     +++      N T+++T+T       ++
Sbjct: 307 TIADLNFSNGATSATVSPDGKQVAFIVRG----EVFVTSADYNTTKQITHTPAREAGLTF 362

Query: 310 SPDSSQIVFESDREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWSPQG 358
           SPD+  + + S+R G  +LY+             +   +++ +    +     P +SP G
Sbjct: 363 SPDNRTLAYASERNGNWELYMAKIARKEEANFPNATAIEEEVLLPSDKTERTYPQFSPDG 422

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFSRKK 410
             +AF +       + V+  +  + R + + S   +       +WSP G+   L F   +
Sbjct: 423 KELAFIEDRN---RLMVINLETKKVRQVTDGSTWFSTGGGFDYSWSPDGKWFTLEFIGNR 479

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWV 443
             D  S +  +   G     +    Y +  P+WV
Sbjct: 480 H-DPYSDIGMVSAQGGKIINLTNSGYTSGSPRWV 512



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 72/201 (35%), Gaps = 28/201 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G       + D    IY V        +LT       S  +SPDS QI F SDR G 
Sbjct: 31  SPDGTEIAFCYKGD----IYKVPANGGTATQLTTQASYECSPIWSPDSKQIAFASDRNGN 86

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----------IG 374
             L+VM ++G   +R++    AS     ++  G+ I F+    +              + 
Sbjct: 87  FDLFVMSADGGAARRLTT-HSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTELY 145

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSIDL- 423
            +   G +   ++     +   +  SG++ ++  +K                 ++  D  
Sbjct: 146 KVPVTGGRTEQVLGTP-AEMVCFDKSGKTFLYQDRKGFEDEWRKHHTSSITRDVWLYDSE 204

Query: 424 NGRNETLINTPAYASDPQWVG 444
           NG++  L        +P +  
Sbjct: 205 NGKHTNLTAHAGEDRNPVFAP 225



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 81/230 (35%), Gaps = 34/230 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S   +P +S + K+   +  +
Sbjct: 30  ISPDGTEIAFCY--KGDIYKV----PANGGTATQLTTQASYECSPIWSPDSKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
           +   D++ +     A  RLT      I ++++ D + I+F +                 +
Sbjct: 84  NGNFDLFVMSADGGAARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTE 143

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +   G   +++     A       S  G    +               S     + +
Sbjct: 144 LYKVPVTGGRTEQVL-GTPAEMVCFDKS--GKTFLYQDRKGFEDEWRKHHTSSITRDVWL 200

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +  +   L       + P ++P G+++ F  ++DG T   +YS  ++
Sbjct: 201 YDSENGKHTNLTAHAGEDRNPVFAPDGQTVYFLSERDGGT-FNVYSFPIS 249



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++VA+    +        + +      K+I +  +      FS + +    + +
Sbjct: 321 TVSPDGKQVAFIVRGE------VFVTSADYNTTKQITHTPAREAGLTFSPDNRTLAYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN------------ISASYSPDSSQIVFESDREGK 325
           ++   ++Y   +         N   I                 +SPD  ++ F  DR   
Sbjct: 375 RNGNWELYMAKIARKEEANFPNATAIEEEVLLPSDKTERTYPQFSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  IG++  
Sbjct: 432 NRLMVINLETKKVRQVTDGSTWFSTGGGFDYSWSPDGKWFTLEFIGNRHDPYSDIGMVSA 491

Query: 379 DGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG 412
            G +   L        +P W   G +++F  ++ G
Sbjct: 492 QGGKIINLTNSGYTSGSPRWVLDGNAILFITERYG 526



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 86/254 (33%), Gaps = 32/254 (12%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +  +G     LT         P +SP+ +++A+A+  + +     +  +    
Sbjct: 41  YKGDIYKVPANGGTATQLTTQAS-YECSPIWSPDSKQIAFASDRNGNFDLFVM--SADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATERL 297
           A +R+    +  +   F+++G   L S    +             ++Y V +    TE++
Sbjct: 98  AARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTELYKVPVTGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  S       ++  
Sbjct: 158 LGTPAEMV--CFDKSGKTFLYQ-DRKGFEDEWRKHHTSSITRDVWLYDSENGKHTNLT-A 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                 +PV++P G  + F ++  G  F +        Q    V         +   G +
Sbjct: 214 HAGEDRNPVFAPDGQTVYFLSERDGGTFNVYSFPISSPQSLKTVTHFKTHPVRFLSMGSN 273

Query: 404 LIFSRKKDGDTGSK 417
                  DG+  ++
Sbjct: 274 GTLCYTYDGEIYTQ 287



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            SP G  IAF         I  +  +G     L   ++ + +P WSP  + + F+  ++G
Sbjct: 30  ISPDGTEIAFCYKGD----IYKVPANGGTATQLTTQASYECSPIWSPDSKQIAFASDRNG 85

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +    L+ +  +G     + T + +  P 
Sbjct: 86  NF--DLFVMSADGGAARRLTTHSASEIPS 112



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 58/353 (16%), Positives = 119/353 (33%), Gaps = 47/353 (13%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEK 170
             V  +GK     V   ++ V        K+   +PA  R+   T S D       +   
Sbjct: 320 ATVSPDGKQVAFIVRGEVF-VTSADYNTTKQITHTPA--REAGLTFSPDNRTLAYASERN 376

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G++   +  ++    +     +             L PS       P+FSP+ +++A+  
Sbjct: 377 GNWELYMAKIARKEEANFPNATAI-------EEEVLLPSDKTERTYPQFSPDGKELAFIE 429

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRA---LISVQKDEAMDIYS 286
            D   ++ + L   ++ +       F         +S +GK      I  + D   DI  
Sbjct: 430 -DRNRLMVINLETKKVRQVTDGSTWFSTGGGFDYSWSPDGKWFTLEFIGNRHDPYSDIGM 488

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----------QLYVMQSNG 335
           V  Q      LTN+ + + S  +  D + I+F ++R G              L  M  + 
Sbjct: 489 VSAQGGKIINLTNSGYTSGSPRWVLDGNAILFITERYGMRAHASWGSLNDVMLVFMNQDA 548

Query: 336 SDQKRISQDKE----------------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            D+ R+S++                            +       +   +   + +   +
Sbjct: 549 YDKFRLSKEDYELQKELEKEQKNTTETKKNDKKKGDNKEKSEEKKEEKVKDIVVELNNIE 608

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
               RL    S+L +   +  G +L +    +G  G  L+ ++L  ++  L++
Sbjct: 609 DRIVRLTPNSSDLGSAIITKDGETLYYLSAFEG--GYDLWKMNLRKKDTKLLH 659


>gi|237724368|ref|ZP_04554849.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229437237|gb|EEO47314.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 1084

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 107/270 (39%), Gaps = 33/270 (12%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V +     +R+L+   +  L    ++ + +   Y     +   +V +  TR D+     
Sbjct: 256 TVTNFKTHPVRFLSMGSNGTLC---YTYDGE--IYTQKQGDKPQKVKIDITRDDQNTIAD 310

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            NF +   +   S +GK+    V+     +++      N T+++T+T       ++SPD+
Sbjct: 311 LNFSNGATSATVSPDGKQIAFIVRG----EVFVTSADYNTTKQITHTPAREAGLTFSPDN 366

Query: 314 SQIVFESDREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             + + S+R G  +LY+             +   +++ +    +     P +SP G  +A
Sbjct: 367 RTLAYASERNGNWELYMAKIARKEEANFPNATTIEEEVLLPSDKTERTYPQFSPDGKELA 426

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFSRKKDGDT 414
           F +       + V+  +  + R + + S   +       +WSP G+   L F   +  D 
Sbjct: 427 FIEDRN---RLMVLNLETKKVRQVTDGSTWFSTGGGFDYSWSPDGKWFTLEFIGNRH-DP 482

Query: 415 GSKLYSIDLNGRNETLINTPAY-ASDPQWV 443
            S +  ++  G     +    Y +  P+WV
Sbjct: 483 YSDIGMVNAQGGKIINLTNSGYTSGSPRWV 512



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A+    +        + +      K+I +  +      FS + +    + +
Sbjct: 321 TVSPDGKQIAFIVRGE------VFVTSADYNTTKQITHTPAREAGLTFSPDNRTLAYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN------------ISASYSPDSSQIVFESDREGK 325
           ++   ++Y   +         N   I                 +SPD  ++ F  DR   
Sbjct: 375 RNGNWELYMAKIARKEEANFPNATTIEEEVLLPSDKTERTYPQFSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  IG++  
Sbjct: 432 NRLMVLNLETKKVRQVTDGSTWFSTGGGFDYSWSPDGKWFTLEFIGNRHDPYSDIGMVNA 491

Query: 379 DGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG 412
            G +   L        +P W   G +++F  ++ G
Sbjct: 492 QGGKIINLTNSGYTSGSPRWVLDGNAILFITERYG 526



 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 72/201 (35%), Gaps = 28/201 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G       + D    IY V        +LT       +  +SPDS QI F SDR G 
Sbjct: 31  SPDGTEIAFCYKGD----IYKVPSNGGTATQLTTQASYECNPIWSPDSKQIAFASDRNGN 86

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----------IG 374
             L+VM ++G   +R++    AS     ++  G+ I F+    +              + 
Sbjct: 87  FDLFVMSADGGAARRLTT-HSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTELY 145

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSIDL- 423
            +   G +   ++     +   +  SG++ ++  +K                 ++  +  
Sbjct: 146 KVPVTGGRTEQVLGTP-AEMVCFDKSGKTFLYQDRKGFEDEWRKHHTSSITRDVWLYNSE 204

Query: 424 NGRNETLINTPAYASDPQWVG 444
           NG++  L        +P +  
Sbjct: 205 NGKHTNLTAHAGEDRNPVFAP 225



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 80/230 (34%), Gaps = 34/230 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S    P +S + K+   +  +
Sbjct: 30  ISPDGTEIAFCY--KGDIYKV----PSNGGTATQLTTQASYECNPIWSPDSKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
           +   D++ +     A  RLT      I ++++ D + I+F +                 +
Sbjct: 84  NGNFDLFVMSADGGAARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTE 143

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +   G   +++     A       S  G    +               S     + +
Sbjct: 144 LYKVPVTGGRTEQVL-GTPAEMVCFDKS--GKTFLYQDRKGFEDEWRKHHTSSITRDVWL 200

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +  +   L       + P ++P G+++ F  +++G T   +YS  ++
Sbjct: 201 YNSENGKHTNLTAHAGEDRNPVFAPDGQTVYFLSERNGGT-FNVYSFPIS 249



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 88/254 (34%), Gaps = 32/254 (12%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +  +G     LT         P +SP+ +++A+A+  + +     +  +    
Sbjct: 41  YKGDIYKVPSNGGTATQLTTQAS-YECNPIWSPDSKQIAFASDRNGNFDLFVM--SADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATERL 297
           A +R+    +  +   F+++G   L S    +             ++Y V +    TE++
Sbjct: 98  AARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTELYKVPVTGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  S       ++  
Sbjct: 158 LGTPAEMV--CFDKSGKTFLYQ-DRKGFEDEWRKHHTSSITRDVWLYNSENGKHTNLT-A 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                 +PV++P G  + F ++ +G  F +        Q    V +       +   G +
Sbjct: 214 HAGEDRNPVFAPDGQTVYFLSERNGGTFNVYSFPISSPQSLETVTNFKTHPVRFLSMGSN 273

Query: 404 LIFSRKKDGDTGSK 417
                  DG+  ++
Sbjct: 274 GTLCYTYDGEIYTQ 287



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
            SP G  IAF         I  +  +G     L   ++ +  P WSP  + + F+  ++G
Sbjct: 30  ISPDGTEIAFCYKGD----IYKVPSNGGTATQLTTQASYECNPIWSPDSKQIAFASDRNG 85

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +    L+ +  +G     + T + +  P 
Sbjct: 86  NF--DLFVMSADGGAARRLTTHSASEIPS 112



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 123/357 (34%), Gaps = 55/357 (15%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEK 170
             V  +GK     V   ++ V        K+   +PA  R+   T S D       +   
Sbjct: 320 ATVSPDGKQIAFIVRGEVF-VTSADYNTTKQITHTPA--REAGLTFSPDNRTLAYASERN 376

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G++   +  ++    +     +             L PS       P+FSP+ +++A+  
Sbjct: 377 GNWELYMAKIARKEEANFPNATTI-------EEEVLLPSDKTERTYPQFSPDGKELAFI- 428

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRA---LISVQKDEAM 282
              ED  R+ +++    +  +++ +              +S +GK      I  + D   
Sbjct: 429 ---EDRNRLMVLNLET-KKVRQVTDGSTWFSTGGGFDYSWSPDGKWFTLEFIGNRHDPYS 484

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----------QLYVM 331
           DI  V+ Q      LTN+ + + S  +  D + I+F ++R G              L  M
Sbjct: 485 DIGMVNAQGGKIINLTNSGYTSGSPRWVLDGNAILFITERYGMRAHASWGSLNDVMLVFM 544

Query: 332 QSNGSDQKRISQDKE----------------ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             +  D+ R+S++                            +       +   +   + +
Sbjct: 545 NQDAYDKFRLSKEDYELQKELEKEQKNTTETKKNGKKKGDNKEKSEEKKEEKVKDIVVEL 604

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              +    RL    S+L +   +  G +L +    +G  G  L+ ++L  ++  L++
Sbjct: 605 NNIEDRIVRLTPNSSDLGSAIITKDGETLYYLSAFEG--GYDLWKMNLRKKDTKLLH 659


>gi|328913235|gb|AEB64831.1| hypothetical protein LL3_03301 [Bacillus amyloliquefaciens LL3]
          Length = 694

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 61/316 (19%), Positives = 116/316 (36%), Gaps = 72/316 (22%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           R  +V   V       S  +M  D   G +  +     D     PR+SP+ +++A+ +  
Sbjct: 61  RAAYVRTKVNDKRDSYSSAIMVYDTESGTSNPWTF--GDNKNSSPRWSPDGRRLAFVSDR 118

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------- 277
           ++ + ++Y++D     A +        +  P ++ +G+  L+SV                
Sbjct: 119 EDGVPQLYIIDAAGGEAERAADIPWG-VADPIWAPDGRSVLVSVSLTSAERADEKEKKKQ 177

Query: 278 --------------KDE-------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                         +D           +  + L++   ++LT+    +  A++SPD  Q+
Sbjct: 178 DEYEPVNIQSLTYKRDGKGLLNGSWTQLVLIHLETGEIQQLTDHEADHFDAAFSPDGKQL 237

Query: 317 VFESD-----REGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            F ++       GK + +Y+M     D K+I+     S+   V+SP G  IA      E 
Sbjct: 238 AFTANLCEPGDAGKPRDVYLMNLADGDLKQITP-HSGSFGSCVFSPDGSYIALLGHENEF 296

Query: 371 FAIGVMKK---DGSQERL--LVE----------------DSNLQAPTWSPSGRSLIFSRK 409
               ++K    D   ERL  L +                      P W+  G+       
Sbjct: 297 RNATLVKAWLYDVKNERLSCLTDMLDVHLSDALIADSLIGGVTPRPVWTNDGQGFYVLGS 356

Query: 410 KDGDTGSKLYSIDLNG 425
           + G TG  +Y I ++G
Sbjct: 357 EQGSTG--IYYISIDG 370



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 98/268 (36%), Gaps = 54/268 (20%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM----ILAPRFSSNG 269
           + +P+++P+ ++ AY      D    Y     +        N  +       +PR+S +G
Sbjct: 50  VTDPQYAPDGRRAAYVRTKVNDKRDSYSSAIMVYDTESGTSNPWTFGDNKNSSPRWSPDG 109

Query: 270 KRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----------- 317
           +R      + D    +Y +D      ER  +  +      ++PD   ++           
Sbjct: 110 RRLAFVSDREDGVPQLYIIDAAGGEAERAADIPWGVADPIWAPDGRSVLVSVSLTSAERA 169

Query: 318 ------------------FESDREGKE-------QLYVMQSNGSDQKRISQDKEASYFDP 352
                                 R+GK        QL ++     + ++++ D EA +FD 
Sbjct: 170 DEKEKKKQDEYEPVNIQSLTYKRDGKGLLNGSWTQLVLIHLETGEIQQLT-DHEADHFDA 228

Query: 353 VWSPQGDLIAFTKF------SGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +SP G  +AFT        +G+   + +M   DG  +++     +  +  +SP G  + 
Sbjct: 229 AFSPDGKQLAFTANLCEPGDAGKPRDVYLMNLADGDLKQITPHSGSFGSCVFSPDGSYIA 288

Query: 406 FSRKKDGDTGSKL---YSIDLNGRNETL 430
               ++    + L   +  D+  +NE L
Sbjct: 289 LLGHENEFRNATLVKAWLYDV--KNERL 314



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 9/105 (8%)

Query: 348 SYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPS 400
           S  DP ++P G   A+ +            AI V   +          D+   +P WSP 
Sbjct: 49  SVTDPQYAPDGRRAAYVRTKVNDKRDSYSSAIMVYDTESGTSNPWTFGDNKNSSPRWSPD 108

Query: 401 GRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQWVG 444
           GR L F   ++ D   +LY ID   G  E   + P   +DP W  
Sbjct: 109 GRRLAFVSDRE-DGVPQLYIIDAAGGEAERAADIPWGVADPIWAP 152



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 27/167 (16%)

Query: 158 ISDDIYQSITGEKGDFNSRIL-----FVSESVVSGIIKNSLCV--MDRDGANIRYLTPSR 210
           ++D   + IT   G F S +      +++        +N+  V     D  N R    + 
Sbjct: 260 LADGDLKQITPHSGSFGSCVFSPDGSYIALLGHENEFRNATLVKAWLYDVKNERLSCLTD 319

Query: 211 ----------------DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
                             +   P ++ + Q   Y    ++    +Y +       P R+ 
Sbjct: 320 MLDVHLSDALIADSLIGGVTPRPVWTNDGQG-FYVLGSEQGSTGIYYISIDGLVYPIRLE 378

Query: 255 NFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNT 300
                  A  F  + K    + V+ +   ++YS+ L+    ++LTN 
Sbjct: 379 EEYVNGFA--FHPDQKSCIAVIVKPERPSELYSISLEDGEEKQLTNN 423


>gi|298251615|ref|ZP_06975418.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
            44963]
 gi|297546207|gb|EFH80075.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
            44963]
          Length = 1223

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 99/268 (36%), Gaps = 22/268 (8%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             + S    +++ + D    ++          +    +SP+ Q +A A +D      ++L 
Sbjct: 776  RLASASWDHTIKLWDVASGDVIQTLMGHTDRVQTVAWSPDGQTLASAAFDH----TIWLW 831

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            D         +     ++ +  F  N +R L S   D  M ++  D ++  +E++  +  
Sbjct: 832  DMEQRTCRMVLQGHTDLVFSLAFMPNSRRLL-SGSVDGTMQVW--DTENGQSEQILQSYA 888

Query: 303  IN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I+    ++SPD ++I   S       + + + +G    R+ Q      F   WSP G  +
Sbjct: 889  ISLYDIAWSPDGTRIASGSS---DGLVMIWEVDGLTPPRLLQGHRHLVFGVEWSPDGRRL 945

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-----WSPSGRSLIFSRKKDGDTGS 416
            A     G   AI V      + + ++ D +    +     WSP G+ L     +      
Sbjct: 946  A---SGGWDNAIRVWDTTTGESQQIMRDPDDAYTSFYGIAWSPDGQHLACGTYR---PEV 999

Query: 417  KLYSIDLNGRNETLINTPAYASDPQWVG 444
            +++ +    R       PA A    W  
Sbjct: 1000 QMWEVSTGTRQWMTRQQPASARRVAWSP 1027



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 112/303 (36%), Gaps = 38/303 (12%)

Query: 128  FRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISDDIY----------QSITGEKGDFN 174
             +LWDV      + ++G        +W     T++   +          Q         +
Sbjct: 786  IKLWDVASGDVIQTLMGHTDRVQTVAWSPDGQTLASAAFDHTIWLWDMEQRTCRMVLQGH 845

Query: 175  SRILFV------SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            + ++F       S  ++SG +  ++ V D +      +  S    L++  +SP+  ++A 
Sbjct: 846  TDLVFSLAFMPNSRRLLSGSVDGTMQVWDTENGQSEQILQSYAISLYDIAWSPDGTRIAS 905

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + D      V + +      P+ +   R ++    +S +G+R            I   D
Sbjct: 906  GSSDG----LVMIWEVDGLTPPRLLQGHRHLVFGVEWSPDGRRLA---SGGWDNAIRVWD 958

Query: 289  LQSNATERLTNTLFINISAS----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
              +  ++++        ++     +SPD   +   + R    ++ + + +   ++ +++ 
Sbjct: 959  TTTGESQQIMRDPDDAYTSFYGIAWSPDGQHLACGTYR---PEVQMWEVSTGTRQWMTRQ 1015

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLV-EDSNLQAPTWSPSGR 402
            + AS     WSP G  +A    +G+   I +    DG   R L    S +    WS  G+
Sbjct: 1016 QPASARRVAWSPDGTRLA---SAGDDGLISLWNPSDGRWLRQLRGHLSKVNDIAWSRDGK 1072

Query: 403  SLI 405
             L 
Sbjct: 1073 WLA 1075



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 91/234 (38%), Gaps = 24/234 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  ++A A++D      + L D       + +      +    +S +G+    S  
Sbjct: 769 AFSPDGSRLASASWDH----TIKLWDVASGDVIQTLMGHTDRVQTVAWSPDGQTLA-SAA 823

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++ ++ ++     L     +  S ++ P+S +++  S  +G  Q++   +    
Sbjct: 824 FDHTIWLWDMEQRTCRMV-LQGHTDLVFSLAFMPNSRRLLSGS-VDGTMQVW--DTENGQ 879

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLV-EDSNLQAP 395
            ++I Q    S +D  WSP G  IA     G    + + + DG +  RLL      +   
Sbjct: 880 SEQILQSYAISLYDIAWSPDGTRIASGSSDG---LVMIWEVDGLTPPRLLQGHRHLVFGV 936

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDP----QWVG 444
            WSP GR L       G   + +   D   G ++ ++  P  A        W  
Sbjct: 937 EWSPDGRRLA-----SGGWDNAIRVWDTTTGESQQIMRDPDDAYTSFYGIAWSP 985



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/325 (16%), Positives = 105/325 (32%), Gaps = 36/325 (11%)

Query: 121  KDRLRVEFRLWDVKDRK--QIIGKKFFSS-------PASWRKIAHTISDDIY-----QSI 166
               +    ++WD ++ +  QI+ + +  S       P   R IA   SD +        +
Sbjct: 863  SGSVDGTMQVWDTENGQSEQIL-QSYAISLYDIAWSPDGTR-IASGSSDGLVMIWEVDGL 920

Query: 167  TGEKGDFNSRILFVS-------ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL---FE 216
            T  +     R L            + SG   N++ V D      + +    D      + 
Sbjct: 921  TPPRLLQGHRHLVFGVEWSPDGRRLASGGWDNAIRVWDTTTGESQQIMRDPDDAYTSFYG 980

Query: 217  PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              +SP+ Q +A  TY  E  +      TR     ++  + R +     +S +G R   S 
Sbjct: 981  IAWSPDGQHLACGTYRPEVQMWEVSTGTRQWMTRQQPASARRV----AWSPDGTRLA-SA 1035

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              D  + +++         +L   L      ++S D   +          +++V + +  
Sbjct: 1036 GDDGLISLWN-PSDGRWLRQLRGHLSKVNDIAWSRDGKWLASGGGSRESGEVFVWEIHSG 1094

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            ++ R+        +   W   G ++      G          +  + R       +Q   
Sbjct: 1095 ERVRVLPRHAGIIYALAWGQTGAILVSGSSDGMLRWWDRHSGECVRVRQ-AHQGTVQRLQ 1153

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSI 421
             SP G+ L        D    L+ +
Sbjct: 1154 VSPDGKWLA---SCGDDGAIHLWDL 1175



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 90/279 (32%), Gaps = 32/279 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
             +          R+WD    +    ++    P           DD Y S  G     + +
Sbjct: 943  RRLASGGWDNAIRVWDTTTGE---SQQIMRDP-----------DDAYTSFYGIAWSPDGQ 988

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
             L        G  +  + + +      +++T  +        +SP+  ++A       D 
Sbjct: 989  HLAC------GTYRPEVQMWEVSTGTRQWMTRQQPASARRVAWSPDGTRLA----SAGDD 1038

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              + L +    R  +++    S +    +S +GK         E+ +++  ++ S    R
Sbjct: 1039 GLISLWNPSDGRWLRQLRGHLSKVNDIAWSRDGKWLASGGGSRESGEVFVWEIHSGERVR 1098

Query: 297  -LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             L     I  + ++    + +V  S       L     +  +  R+ Q  + +      S
Sbjct: 1099 VLPRHAGIIYALAWGQTGAILVSGSS---DGMLRWWDRHSGECVRVRQAHQGTVQRLQVS 1155

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQ 393
            P G  +A     G+  AI +   +     R L  D   +
Sbjct: 1156 PDGKWLASC---GDDGAIHLWDLESGNLLRTLQRDRPYE 1191



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 78/226 (34%), Gaps = 23/226 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G  +  +CV   D   +  +  +   I+    FSP+   +A  +YD      V +    
Sbjct: 612 AGSRRGEICVW--DQQTLHRVWRAHSDIVRSLSFSPDGHFLASGSYDG----MVNVWGVE 665

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +G+  + I    FS +G     S   D  + ++  D ++ A            
Sbjct: 666 HGALL-WLGSHTANISGLAFSPDGSLLA-SGGIDATVRLW--DRKTGALLETLPHPHAVF 721

Query: 306 SASYSPDSSQIV---FESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLI 361
           + ++SPD   +    F    +G+ +L+  + + +           +      +SP G  +
Sbjct: 722 TLAWSPDGHLLASFGF----DGQIRLWKRRQSETTTCVACLSGHTNCGMGLAFSPDGSRL 777

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
           A   +      I +           +      +Q   WSP G++L 
Sbjct: 778 ASASWD---HTIKLWDVASGDVIQTLMGHTDRVQTVAWSPDGQTLA 820



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 45/149 (30%), Gaps = 13/149 (8%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            T+T     S + S D       S R    ++ V         R+ +          +SP
Sbjct: 591 WTSTFGAAWSVAISHDGRYHAAGSRRG---EICVWDQQT--LHRVWRAHSDIVRSLSFSP 645

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTG 415
            G  +A   + G     GV    G+   L    +N+    +SP G  L       G D  
Sbjct: 646 DGHFLASGSYDGMVNVWGVEH--GALLWLGSHTANISGLAFSPDGSLLA----SGGIDAT 699

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVG 444
            +L+     G     +  P       W  
Sbjct: 700 VRLWD-RKTGALLETLPHPHAVFTLAWSP 727


>gi|237709151|ref|ZP_04539632.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229456847|gb|EEO62568.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 1084

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 107/270 (39%), Gaps = 33/270 (12%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V +     +R+L+   +  L    ++ + +   Y     +   +V +  TR D+     
Sbjct: 256 TVTNFKTHPVRFLSMGSNGTLC---YTYDGE--IYTQKQGDKPQKVKIDITRDDQNTIAD 310

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            NF +   +   S +GK+    V+     +++      N T+++T+T       ++SPD+
Sbjct: 311 LNFSNGATSATVSPDGKQIAFIVRG----EVFVTSADYNTTKQITHTPAREAGLTFSPDN 366

Query: 314 SQIVFESDREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             + + S+R G  +LY+             +   +++ +    +     P +SP G  +A
Sbjct: 367 RTLAYASERNGNWELYMAKIARKEEANFPNATTIEEEVLLPSDKTERTYPQFSPDGKELA 426

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFSRKKDGDT 414
           F +       + V+  +  + R + + S   +       +WSP G+   L F   +  D 
Sbjct: 427 FIEDRN---RLMVLNLETKKVRQVTDGSTWFSTGGGFDYSWSPDGKWFTLEFIGNRH-DP 482

Query: 415 GSKLYSIDLNGRNETLINTPAY-ASDPQWV 443
            S +  ++  G     +    Y +  P+WV
Sbjct: 483 YSDIGMVNAQGGKIINLTNSGYTSGSPRWV 512



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A+    +        + +      K+I +  +      FS + +    + +
Sbjct: 321 TVSPDGKQIAFIVRGE------VFVTSADYNTTKQITHTPAREAGLTFSPDNRTLAYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN------------ISASYSPDSSQIVFESDREGK 325
           ++   ++Y   +         N   I                 +SPD  ++ F  DR   
Sbjct: 375 RNGNWELYMAKIARKEEANFPNATTIEEEVLLPSDKTERTYPQFSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  IG++  
Sbjct: 432 NRLMVLNLETKKVRQVTDGSTWFSTGGGFDYSWSPDGKWFTLEFIGNRHDPYSDIGMVNA 491

Query: 379 DGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG 412
            G +   L        +P W   G +++F  ++ G
Sbjct: 492 QGGKIINLTNSGYTSGSPRWVLDGNAILFITERYG 526



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 72/201 (35%), Gaps = 28/201 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G       + D    IY V        +LT       +  +SPDS QI F SDR G 
Sbjct: 31  SPDGTEIAFCYKGD----IYKVPSNGGTATQLTTQASYECNPIWSPDSKQIAFASDRNGN 86

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----------IG 374
             L+VM ++G   +R++    AS     ++  G+ I F+    +              + 
Sbjct: 87  FDLFVMSADGGAARRLTT-HSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTELY 145

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSIDL- 423
            +   G +   ++     +   +  SG++ ++  +K                 ++  +  
Sbjct: 146 KVPVTGGRTEQVLGTP-AEMVCFDKSGKTFLYQDRKGFEDEWRKHHTSSITRDVWLYNSE 204

Query: 424 NGRNETLINTPAYASDPQWVG 444
           NG++  L        +P +  
Sbjct: 205 NGKHTNLTAHAGEDRNPVFAP 225



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 80/230 (34%), Gaps = 34/230 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S    P +S + K+   +  +
Sbjct: 30  ISPDGTEIAFCY--KGDIYKV----PSNGGTATQLTTQASYECNPIWSPDSKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
           +   D++ +     A  RLT      I ++++ D + I+F +                 +
Sbjct: 84  NGNFDLFVMSADGGAARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTE 143

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +   G   +++     A       S  G    +               S     + +
Sbjct: 144 LYKVPVTGGRTEQVL-GTPAEMVCFDKS--GKTFLYQDRKGFEDEWRKHHTSSITRDVWL 200

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +  +   L       + P ++P G+++ F  +++G T   +YS  ++
Sbjct: 201 YNSENGKHTNLTAHAGEDRNPVFAPDGQTVYFLSERNGGT-FNVYSFPIS 249



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 88/254 (34%), Gaps = 32/254 (12%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +  +G     LT         P +SP+ +++A+A+  + +     +  +    
Sbjct: 41  YKGDIYKVPSNGGTATQLTTQAS-YECNPIWSPDSKQIAFASDRNGNFDLFVM--SADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATERL 297
           A +R+    +  +   F+++G   L S    +             ++Y V +    TE++
Sbjct: 98  AARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTELYKVPVTGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  S       ++  
Sbjct: 158 LGTPAEMV--CFDKSGKTFLYQ-DRKGFEDEWRKHHTSSITRDVWLYNSENGKHTNLT-A 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                 +PV++P G  + F ++ +G  F +        Q    V +       +   G +
Sbjct: 214 HAGEDRNPVFAPDGQTVYFLSERNGGTFNVYSFPISSPQSLETVTNFKTHPVRFLSMGSN 273

Query: 404 LIFSRKKDGDTGSK 417
                  DG+  ++
Sbjct: 274 GTLCYTYDGEIYTQ 287



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
            SP G  IAF         I  +  +G     L   ++ +  P WSP  + + F+  ++G
Sbjct: 30  ISPDGTEIAFCYKGD----IYKVPSNGGTATQLTTQASYECNPIWSPDSKQIAFASDRNG 85

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +    L+ +  +G     + T + +  P 
Sbjct: 86  NF--DLFVMSADGGAARRLTTHSASEIPS 112



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 59/367 (16%), Positives = 126/367 (34%), Gaps = 57/367 (15%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEK 170
             V  +GK     V   ++ V        K+   +PA  R+   T S D       +   
Sbjct: 320 ATVSPDGKQIAFIVRGEVF-VTSADYNTTKQITHTPA--REAGLTFSPDNRTLAYASERN 376

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G++   +  ++    +     +             L PS       P+FSP+ +++A+  
Sbjct: 377 GNWELYMAKIARKEEANFPNATTI-------EEEVLLPSDKTERTYPQFSPDGKELAFI- 428

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRA---LISVQKDEAM 282
              ED  R+ +++    +  +++ +              +S +GK      I  + D   
Sbjct: 429 ---EDRNRLMVLNLET-KKVRQVTDGSTWFSTGGGFDYSWSPDGKWFTLEFIGNRHDPYS 484

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----------QLYVM 331
           DI  V+ Q      LTN+ + + S  +  D + I+F ++R G              L  M
Sbjct: 485 DIGMVNAQGGKIINLTNSGYTSGSPRWVLDGNAILFITERYGMRAHASWGSLNDVMLVFM 544

Query: 332 QSNGSDQKRISQDKE----------------ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             +  D+ R+S++                            +       +   +   + +
Sbjct: 545 NQDAYDKFRLSKEDYELQKELEKEQKNTTETKKNGKKKGDNKEKSEEKKEEKVKDIVVEL 604

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--T 433
              +    RL    S+L +   +  G +L +    +G  G  L+ ++L  ++  L++   
Sbjct: 605 NNIEDRIVRLTPNSSDLGSAIITKDGETLYYLSAFEG--GYDLWKMNLRKKDTKLLHKMD 662

Query: 434 PAYASDP 440
             +A+  
Sbjct: 663 AGWANMG 669


>gi|218921792|emb|CAW30777.1| P52CeGA [Caenorhabditis elegans]
          Length = 460

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 81/208 (38%), Gaps = 32/208 (15%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           R     +R+ +          S +G +   +  +   +++Y +D+      ++TN L  +
Sbjct: 190 RYGNFVQRLTDSPGYDAEGVVSPDGTKIAFTSIRSGDLELYIMDIDGKNLIQITNELGYD 249

Query: 305 ISASYSPDSSQIVFESDREGK--------------------EQLYVMQSNGSDQKRISQD 344
             + ++PD  +++F + R                        +L+++  +G + ++I+  
Sbjct: 250 GGSFFTPDGKRLIFRASRPKNETEIAKYKKLLSYNLVEPIAMELFIVDIDGQNLRKITNL 309

Query: 345 KEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTW- 397
            EA++   + +     I F+            F++ ++  DG+  + +      Q  ++ 
Sbjct: 310 GEANWAPYMLN-DNKRIIFSSNYDTAANGFGAFSLYMVNDDGTGLQQIT-FGQNQFNSFA 367

Query: 398 --SPSGRSLIFSRKKDGDT-GSKLYSID 422
             S  G+ L++   ++G      L+  D
Sbjct: 368 MQSYDGKKLVWGSSRNGTMYELNLFIAD 395



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 26/176 (14%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DI+ VD   N  +RLT++   +     SPD ++I F S R G  +LY+M  +G +  +I
Sbjct: 183 YDIFKVDRYGNFVQRLTDSPGYDAEGVVSPDGTKIAFTSIRSGDLELYIMDIDGKNLIQI 242

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEK--------------------FAIGVMKKDGS 381
           + +         ++P G  + F     +                       + ++  DG 
Sbjct: 243 TNEL-GYDGGSFFTPDGKRLIFRASRPKNETEIAKYKKLLSYNLVEPIAMELFIVDIDGQ 301

Query: 382 QERLLVEDS-NLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLIN 432
             R +        AP      + +IFS   D    G     LY ++ +G     I 
Sbjct: 302 NLRKITNLGEANWAPYMLNDNKRIIFSSNYDTAANGFGAFSLYMVNDDGTGLQQIT 357



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 82/217 (37%), Gaps = 30/217 (13%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              +  +DR G N             E   SP+  K+A+ +    D L +Y+MD    + 
Sbjct: 182 DYDIFKVDRYG-NFVQRLTDSPGYDAEGVVSPDGTKIAFTSIRSGD-LELYIMDID-GKN 238

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEA--------------------MDIYSVDL 289
             +I N         F+ +GKR +    + +                     M+++ VD+
Sbjct: 239 LIQITNELGYDGGSFFTPDGKRLIFRASRPKNETEIAKYKKLLSYNLVEPIAMELFIVDI 298

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQ 343
                 ++TN    N +     D+ +I+F S+ +      G   LY++  +G+  ++I+ 
Sbjct: 299 DGQNLRKITNLGEANWAPYMLNDNKRIIFSSNYDTAANGFGAFSLYMVNDDGTGLQQITF 358

Query: 344 DKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKD 379
            +       + S  G  + + +  +G  + + +   D
Sbjct: 359 GQNQFNSFAMQSYDGKKLVWGSSRNGTMYELNLFIAD 395



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 93/281 (33%), Gaps = 41/281 (14%)

Query: 196 MDRDG----ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRID--- 247
           +  DG    AN++ LT           FS +  K+         D  ++Y +D  ID   
Sbjct: 49  VHFDGETHLANVKQLTFGGMNAEGY--FSFDNSKLTLQATGYGTDCDQIYELDLNIDPRL 106

Query: 248 RAPKRIGNFRSMILAPRF--SSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFIN 304
           +  +RI           F   ++    L +          + D+      ++  N     
Sbjct: 107 QTLRRISTGLGATTCSYFYKEADNNHRLYAGNWWNVKVDNTTDVSKTCPPKQCANPQTDE 166

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +    +       +  D      ++ +   G+  +R++ D      + V SP G  IAFT
Sbjct: 167 LKHLCNTS-----YTWDIFADYDIFKVDRYGNFVQRLT-DSPGYDAEGVVSPDGTKIAFT 220

Query: 365 KFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGS------- 416
                   + +M  DG     +  +        ++P G+ LIF   +  +          
Sbjct: 221 SIRSGDLELYIMDIDGKNLIQITNELGYDGGSFFTPDGKRLIFRASRPKNETEIAKYKKL 280

Query: 417 -----------KLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                      +L+ +D++G+N   I     A+   W  +M
Sbjct: 281 LSYNLVEPIAMELFIVDIDGQNLRKITNLGEAN---WAPYM 318


>gi|224537071|ref|ZP_03677610.1| hypothetical protein BACCELL_01948 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521298|gb|EEF90403.1| hypothetical protein BACCELL_01948 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 1082

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 64/342 (18%), Positives = 140/342 (40%), Gaps = 26/342 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKK-FFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            +   +R   EFR W             +  +  S   I + ++ DI+    G+   F S
Sbjct: 176 KRLAYNRTMREFRTWKYYKGGMADDVWIYDPAKKSVENITNNVAQDIFPMWIGDDIFFLS 235

Query: 176 -RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   ++  V +   K +  V +    ++++ + S + I+FE     N   +        
Sbjct: 236 DRDRTMNIFVYNTKTKQTSKVTNFTEYDVKFPSASGNTIVFE-----NGGYIYKMDAATR 290

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +V +     +   +  I N    + A   S +G+R +++ +     +++++      
Sbjct: 291 QPEKVNISLASDNIYARSAIKNGAKYLTAASASPDGERVVVTARG----EVFNLPSTKGV 346

Query: 294 TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ +T T       A +SPD   I + SD  G+ +LY+  +   +  +++++ +      
Sbjct: 347 TKNITRTPGAHERDAQWSPDGKCIAYISDATGETELYLQDAVEGNPVQLTKNNDTYIRSF 406

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            WSP    I +T        I ++     Q  +L++D     Q  T+SP  + L ++R  
Sbjct: 407 EWSPDSKKIVYTDRQN---RINLLDVASRQVTMLLQDPMGEPQDVTFSPDSKWLTYTRDA 463

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           D +  + +Y  D+ G+ E  +        +P +++D +++ F
Sbjct: 464 DNEI-TVVYVYDIAGKKEYPVTDKWYNSSSPVFSTDGKYLIF 504



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 77/202 (38%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y V +     +RLT+ +   +   +SPD   I F    +G  +
Sbjct: 34  NGNEIVFSYAGD----LYRVPVTGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGNTE 89

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKF--AIG 374
           +Y + + G + +R++       D       P      W+P G  I +     + F   + 
Sbjct: 90  VYTIPAAGGEPQRLTYTATNSRDDLGDRMGPNNIVMTWTPDGKQIIYRNRISDGFAGKLY 149

Query: 375 VMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSIDL 423
            + ++G    +  L E       ++SP G+ L ++R            G     ++  D 
Sbjct: 150 SVNQEGGMPEIIPLPEGGFC---SYSPDGKRLAYNRTMREFRTWKYYKGGMADDVWIYDP 206

Query: 424 NGRN-ETLINTPAYASDPQWVG 444
             ++ E + N  A    P W+G
Sbjct: 207 AKKSVENITNNVAQDIFPMWIG 228



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 78/220 (35%), Gaps = 13/220 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MIL 261
            R    +  + L     SP+ ++V      +                 K I         
Sbjct: 306 ARSAIKNGAKYLTAASASPDGERVVVTARGE------VFNLPSTKGVTKNITRTPGAHER 359

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFES 320
             ++S +GK            ++Y  D       +LT N      S  +SPDS +IV+  
Sbjct: 360 DAQWSPDGKCIAYISDATGETELYLQDAVEGNPVQLTKNNDTYIRSFEWSPDSKKIVYT- 418

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKD 379
           DR+   ++ ++         + QD      D  +SP    + +T+ +  +   + V    
Sbjct: 419 DRQ--NRINLLDVASRQVTMLLQDPMGEPQDVTFSPDSKWLTYTRDADNEITVVYVYDIA 476

Query: 380 GSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           G +E  + +   N  +P +S  G+ LIFS  +D +     
Sbjct: 477 GKKEYPVTDKWYNSSSPVFSTDGKYLIFSSARDFNPTYGW 516



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 85/246 (34%), Gaps = 37/246 (15%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N  ++ ++     D+ RV +         +R+ +     + PRFS +GK    + Q D  
Sbjct: 34  NGNEIVFSY--AGDLYRVPV----TGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGN 87

Query: 282 MDIYSVDLQSNATERLT-------NTLFINISA-----SYSPDSSQIVFESD-REG-KEQ 327
            ++Y++       +RLT       + L   +       +++PD  QI++ +   +G   +
Sbjct: 88  TEVYTIPAAGGEPQRLTYTATNSRDDLGDRMGPNNIVMTWTPDGKQIIYRNRISDGFAGK 147

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFAIGVM 376
           LY +   G   + I   +        +SP G  +A+ +             G    + + 
Sbjct: 148 LYSVNQEGGMPEIIPLPEGGF---CSYSPDGKRLAYNRTMREFRTWKYYKGGMADDVWIY 204

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                    +  + +    P W   G  + F   +D      +Y+      ++    T  
Sbjct: 205 DPAKKSVENITNNVAQDIFPMWI--GDDIFFLSDRDRTMNIFVYNTKTKQTSKVTNFTEY 262

Query: 436 YASDPQ 441
               P 
Sbjct: 263 DVKFPS 268



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 95/268 (35%), Gaps = 43/268 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   + LT S       PRFSP+ + +A+    D +   VY +       P+
Sbjct: 45  DLYRVPVTGGEAQRLT-SHVGYEMFPRFSPDGKTIAFTGQYDGNT-EVYTI-PAAGGEPQ 101

Query: 252 RIG------------NFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERL 297
           R+                   +   ++ +GK+ +    +    A  +YSV+ +    E +
Sbjct: 102 RLTYTATNSRDDLGDRMGPNNIVMTWTPDGKQIIYRNRISDGFAGKLYSVNQEGGMPEII 161

Query: 298 TNTLFINISASYSPDSSQIVFESD----REGK-------EQLYVMQSNGSDQKRISQDKE 346
                     SYSPD  ++ +       R  K       + +++        + I+ +  
Sbjct: 162 PLPEG--GFCSYSPDGKRLAYNRTMREFRTWKYYKGGMADDVWIYDPAKKSVENITNNVA 219

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
              F P+W   GD I F         I V      Q   +    + +++ P+ S  G ++
Sbjct: 220 QDIF-PMW--IGDDIFFLSDRDRTMNIFVYNTKTKQTSKVTNFTEYDVKFPSAS--GNTI 274

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +F      + G  +Y +D   R    +N
Sbjct: 275 VF------ENGGYIYKMDAATRQPEKVN 296



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 81/215 (37%), Gaps = 9/215 (4%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGII--KNSLCVMDRDGANIRYLTPSRDQILF 215
            SD+IY     + G         S      ++  +  +  +       + +T +      
Sbjct: 300 ASDNIYARSAIKNGAKYLTAASASPDGERVVVTARGEVFNLPSTKGVTKNITRTPGAHER 359

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           + ++SP+ + +AY + D      +YL D       +   N  + I +  +S + K+ + +
Sbjct: 360 DAQWSPDGKCIAYIS-DATGETELYLQDAVEGNPVQLTKNNDTYIRSFEWSPDSKKIVYT 418

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGK-EQLYVMQS 333
              D    I  +D+ S     L           ++SPDS  + +  D + +   +YV   
Sbjct: 419 ---DRQNRINLLDVASRQVTMLLQDPMGEPQDVTFSPDSKWLTYTRDADNEITVVYVYDI 475

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            G  +  ++ DK  +   PV+S  G  + F+    
Sbjct: 476 AGKKEYPVT-DKWYNSSSPVFSTDGKYLIFSSARD 509



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 83/223 (37%), Gaps = 26/223 (11%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFR--LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           GA+ L       +G+ R+ V  R  ++++   K +  K    +P +            ++
Sbjct: 313 GAKYLTAASASPDGE-RVVVTARGEVFNLPSTKGVT-KNITRTPGA------------HE 358

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                  D    I ++S++      +  L + D    N   LT + D  +    +SP+ +
Sbjct: 359 RDAQWSPDGKC-IAYISDATG----ETELYLQDAVEGNPVQLTKNNDTYIRSFEWSPDSK 413

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           K+ Y    +    R+ L+D    +    + +         FS + K    +   D  + +
Sbjct: 414 KIVYTDRQN----RINLLDVASRQVTMLLQDPMGEPQDVTFSPDSKWLTYTRDADNEITV 469

Query: 285 -YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            Y  D+       +T+  + + S  +S D   ++F S R+   
Sbjct: 470 VYVYDIAGKKEYPVTDKWYNSSSPVFSTDGKYLIFSSARDFNP 512


>gi|150003761|ref|YP_001298505.1| putative peptidase/protease family protein [Bacteroides vulgatus
           ATCC 8482]
 gi|149932185|gb|ABR38883.1| putative peptidase/protease family protein [Bacteroides vulgatus
           ATCC 8482]
          Length = 1084

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 119/334 (35%), Gaps = 41/334 (12%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D ++ K        +     R             ++   G   +   F   S  S   
Sbjct: 200 LYDSENGKH---TNLTAHAGEDRNPVFAPDGQTVYFLSERDGSTFNVYSFPISSPQSLKT 256

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
                V       +R+L+   +  L    ++ + +   Y     +   +V +   R D+ 
Sbjct: 257 -----VTHFKTHPVRFLSMGSNGTLC---YTYDGE--IYTQKQGDKPQKVKIDIIRDDQN 306

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
                NF +   +   S +GK+    V+     +++      N T+++T+T       ++
Sbjct: 307 TIADLNFSNGATSATVSPDGKQVAFIVRG----EVFVTSADYNTTKQITHTPAREAGLTF 362

Query: 310 SPDSSQIVFESDREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWSPQG 358
           SPD+  + + S+R G  +LY+             +   +++ +    +     P +SP G
Sbjct: 363 SPDNRTLAYASERNGNWELYMAKIARKEEANFPNATAIEEEVLLPSDKTERTYPQFSPDG 422

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFSRKK 410
             +AF +       + V+  +  + R + + S   +       +WSP G+   L F   +
Sbjct: 423 KELAFIEDRN---RLMVINLETKKVRQVTDGSTWFSTGGGFDYSWSPDGKWFTLEFIGNR 479

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWV 443
             D  S +  +   G     +    Y +  P+WV
Sbjct: 480 H-DPYSDIGMVSAQGGKIINLTNSGYTSGSPRWV 512



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 72/201 (35%), Gaps = 28/201 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G       + D    IY V        +LT       S  +SPDS QI F SDR G 
Sbjct: 31  SPDGTEIAFCYKGD----IYKVPANGGTATQLTTQASYECSPIWSPDSKQIAFASDRNGN 86

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----------IG 374
             L+VM ++G   +R++    AS     ++  G+ I F+    +              + 
Sbjct: 87  FDLFVMSADGGAARRLTT-HSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTELY 145

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSIDL- 423
            +   G +   ++     +   +  SG++ ++  +K                 ++  D  
Sbjct: 146 KVPVTGGRTEQVLGTP-AEMVCFDKSGKTFLYQDRKGFEDEWRKHHTSSITRDVWLYDSE 204

Query: 424 NGRNETLINTPAYASDPQWVG 444
           NG++  L        +P +  
Sbjct: 205 NGKHTNLTAHAGEDRNPVFAP 225



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 81/230 (35%), Gaps = 34/230 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S   +P +S + K+   +  +
Sbjct: 30  ISPDGTEIAFCY--KGDIYKV----PANGGTATQLTTQASYECSPIWSPDSKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
           +   D++ +     A  RLT      I ++++ D + I+F +                 +
Sbjct: 84  NGNFDLFVMSADGGAARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTE 143

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +   G   +++     A       S  G    +               S     + +
Sbjct: 144 LYKVPVTGGRTEQVL-GTPAEMVCFDKS--GKTFLYQDRKGFEDEWRKHHTSSITRDVWL 200

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +  +   L       + P ++P G+++ F  ++DG T   +YS  ++
Sbjct: 201 YDSENGKHTNLTAHAGEDRNPVFAPDGQTVYFLSERDGST-FNVYSFPIS 249



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++VA+    +        + +      K+I +  +      FS + +    + +
Sbjct: 321 TVSPDGKQVAFIVRGE------VFVTSADYNTTKQITHTPAREAGLTFSPDNRTLAYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN------------ISASYSPDSSQIVFESDREGK 325
           ++   ++Y   +         N   I                 +SPD  ++ F  DR   
Sbjct: 375 RNGNWELYMAKIARKEEANFPNATAIEEEVLLPSDKTERTYPQFSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  IG++  
Sbjct: 432 NRLMVINLETKKVRQVTDGSTWFSTGGGFDYSWSPDGKWFTLEFIGNRHDPYSDIGMVSA 491

Query: 379 DGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG 412
            G +   L        +P W   G +++F  ++ G
Sbjct: 492 QGGKIINLTNSGYTSGSPRWVLDGNAILFITERYG 526



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 86/254 (33%), Gaps = 32/254 (12%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +  +G     LT         P +SP+ +++A+A+  + +     +  +    
Sbjct: 41  YKGDIYKVPANGGTATQLTTQAS-YECSPIWSPDSKQIAFASDRNGNFDLFVM--SADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATERL 297
           A +R+    +  +   F+++G   L S    +             ++Y V +    TE++
Sbjct: 98  AARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTELYKVPVTGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  S       ++  
Sbjct: 158 LGTPAEMV--CFDKSGKTFLYQ-DRKGFEDEWRKHHTSSITRDVWLYDSENGKHTNLT-A 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                 +PV++P G  + F ++  G  F +        Q    V         +   G +
Sbjct: 214 HAGEDRNPVFAPDGQTVYFLSERDGSTFNVYSFPISSPQSLKTVTHFKTHPVRFLSMGSN 273

Query: 404 LIFSRKKDGDTGSK 417
                  DG+  ++
Sbjct: 274 GTLCYTYDGEIYTQ 287



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            SP G  IAF         I  +  +G     L   ++ + +P WSP  + + F+  ++G
Sbjct: 30  ISPDGTEIAFCYKGD----IYKVPANGGTATQLTTQASYECSPIWSPDSKQIAFASDRNG 85

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +    L+ +  +G     + T + +  P 
Sbjct: 86  NF--DLFVMSADGGAARRLTTHSASEIPS 112



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 120/353 (33%), Gaps = 47/353 (13%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEK 170
             V  +GK     V   ++ V        K+   +PA  R+   T S D       +   
Sbjct: 320 ATVSPDGKQVAFIVRGEVF-VTSADYNTTKQITHTPA--REAGLTFSPDNRTLAYASERN 376

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G++   +  ++    +     +             L PS       P+FSP+ +++A+  
Sbjct: 377 GNWELYMAKIARKEEANFPNATAI-------EEEVLLPSDKTERTYPQFSPDGKELAFIE 429

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRA---LISVQKDEAMDIYS 286
            D   ++ + L   ++ +       F         +S +GK      I  + D   DI  
Sbjct: 430 -DRNRLMVINLETKKVRQVTDGSTWFSTGGGFDYSWSPDGKWFTLEFIGNRHDPYSDIGM 488

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----------QLYVMQSNG 335
           V  Q      LTN+ + + S  +  D + I+F ++R G              L  M  + 
Sbjct: 489 VSAQGGKIINLTNSGYTSGSPRWVLDGNAILFITERYGMRAHASWGSLNDVMLVFMNQDA 548

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG----------------EKFAIGVMKKD 379
            D+ R+S++      +     +    A                      +   + +   +
Sbjct: 549 YDKFRLSKEDYELQKELEKEQKNTTEAKKNDKKKGDNKEKSEEKKEEKVKDIVVELNNIE 608

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
               RL    S+L +   +  G +L +    +G  G  L+ ++L  ++  L++
Sbjct: 609 DRIVRLTPNSSDLGSAIITKDGETLYYLSAFEG--GYDLWKMNLRKKDTKLLH 659


>gi|83814217|ref|YP_446141.1| acyl-peptide hydrolase, putative [Salinibacter ruber DSM 13855]
 gi|294508064|ref|YP_003572122.1| peptidase [Salinibacter ruber M8]
 gi|83755611|gb|ABC43724.1| acyl-peptide hydrolase, putative [Salinibacter ruber DSM 13855]
 gi|294344392|emb|CBH25170.1| putative peptidase [Salinibacter ruber M8]
          Length = 690

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 55/321 (17%), Positives = 111/321 (34%), Gaps = 62/321 (19%)

Query: 175 SRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            R+++       +     + L  ++ DG+  R +T   +    +PR+SP+  +VAY    
Sbjct: 56  DRVVYARTVMDKMDDRRASRLWAVNADGSGHRPITA-PETNASQPRWSPSGDRVAYVAST 114

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV---------------- 276
           + D   V++      +   RI           +   G R   S+                
Sbjct: 115 EGDGAEVFVRWMDTGQ-TARITQLEESPSGLSWGPEGDRLAFSMFVPAEPEPFARMPSPP 173

Query: 277 ------------------------QKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSP 311
                                    +     ++ V        ++T   + +    +++P
Sbjct: 174 EGADWAERPDVIDQTYYRSDGGGYTERGHTQLFVVSASGGTPRQITTGPYDHGGAPTWTP 233

Query: 312 DSSQIVFESDREGKEQL-------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           D   ++  ++R    +L       Y +         ++  ++    D   SP G  IA+T
Sbjct: 234 DGETLLISANRHADRRLDPLNTEVYAVDVASGAVTALTT-RQGPDGDVALSPDGSTIAYT 292

Query: 365 KFSGEKF-----AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            F   +       + VM +DG+  RLL E  D ++Q PT++  G  ++F    +G T  K
Sbjct: 293 GFDDREQGYQVTKLYVMDRDGTNARLLTEGFDRDVQNPTFTADGEHIVFRYVDEGST--K 350

Query: 418 LYSIDLNGRNETLINTPAYAS 438
           +  + L+G    +       S
Sbjct: 351 IGRVALDGGRRVVAEHVGGTS 371



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 82/225 (36%), Gaps = 55/225 (24%)

Query: 263 PRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P+ S +G R + +    + MD      +++V+   +    +T          +SP   ++
Sbjct: 49  PQISPSGDRVVYARTVMDKMDDRRASRLWAVNADGSGHRPITAPETNASQPRWSPSGDRV 108

Query: 317 VFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
            + +  EG   +++V   +     RI+Q +E S     W P+GD +AF+           
Sbjct: 109 AYVASTEGDGAEVFVRWMDTGQTARITQLEE-SPSGLSWGPEGDRLAFSMFVPAEPEPFA 167

Query: 365 -----------------------KFSGEKF------AIGVMKKDGSQERLLVEDSNLQ-- 393
                                  +  G  +       + V+   G   R +         
Sbjct: 168 RMPSPPEGADWAERPDVIDQTYYRSDGGGYTERGHTQLFVVSASGGTPRQITTGPYDHGG 227

Query: 394 APTWSPSGRSLIFSRKKDGDT-----GSKLYSIDLNGRNETLINT 433
           APTW+P G +L+ S  +  D       +++Y++D+     T + T
Sbjct: 228 APTWTPDGETLLISANRHADRRLDPLNTEVYAVDVASGAVTALTT 272



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 63/166 (37%), Gaps = 13/166 (7%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--DILRVYL 241
              G     L VMDRDG N R LT   D+ +  P F+ + + + +   D+    I RV L
Sbjct: 297 REQGYQVTKLYVMDRDGTNARLLTEGFDRDVQNPTFTADGEHIVFRYVDEGSTKIGRVAL 356

Query: 242 MDTRIDRAPKRIGNFRS---MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
              R   A    G          +   +SNG R   +    +     +V       + LT
Sbjct: 357 DGGRRVVAEHVGGTSIGRPYTSGSFSLASNG-RVAFTHATPQRPADVAVAQAGREAQVLT 415

Query: 299 NTLFINISASYSPD-SS--QIVFESDREGKE-QLYVMQSNGSDQKR 340
               +N       D  S  QI +ES  +G+  + +++   G D  +
Sbjct: 416 ---ALNDDLFGQVDLGSVEQITYESSHDGRTIEGWIVTPPGFDASQ 458


>gi|255690149|ref|ZP_05413824.1| MdsD protein [Bacteroides finegoldii DSM 17565]
 gi|260624433|gb|EEX47304.1| MdsD protein [Bacteroides finegoldii DSM 17565]
          Length = 1101

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 86/237 (36%), Gaps = 36/237 (15%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            + + R SP+  ++ +      DI +V    +       ++    S    P +S +G++ 
Sbjct: 26  WMRDARISPDGSEIVFCY--KGDIYKV----SAQGGTAVQLTTQASYEANPVWSPDGEQI 79

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
             +  ++   D++ +     A  RLT      I ++++PD   ++F +            
Sbjct: 80  AFASDRNGNFDLFIMSADGGAARRLTYHSASEIPSTFTPDGKYVLFSASIQDPATSALFP 139

Query: 322 REGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAF------------TKFSG 368
                +LY +   G + +++     E   FD      G    +               S 
Sbjct: 140 TSAMTELYRVPVEGGNTEQVLGTPAEWVCFDKA----GSNFLYQDRKGFEDEWRKHHTSS 195

Query: 369 EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               I +      +   L   D   + P ++P G+S+ F  +++G +   +YS  LN
Sbjct: 196 IARDIWLYDTQTGEHTNLTNRDGEDRNPVYAPDGKSVYFLSERNGGS-FNVYSFPLN 251



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 104/326 (31%), Gaps = 82/326 (25%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             + + D           +RD     P ++P+ + V + +  +     VY       +  
Sbjct: 198 RDIWLYD-TQTGEHTNLTNRDGEDRNPVYAPDGKSVYFLSERNGGSFNVYSFPLNAPQQV 256

Query: 251 KRIGNFRSM--------------------------------------------------- 259
           K +  FR+                                                    
Sbjct: 257 KPVTTFRTHPVRFLSVSDKGTLCYAYDGELYTQLPNSRPQKVKVELVRDDDKDIASFRFS 316

Query: 260 --ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               +   S +GK+    V+ D    ++        T+++TNT       S++PD+  +V
Sbjct: 317 QGATSACVSPDGKQVAFIVRGD----VFVTSTDYPTTKQITNTPAGESGLSFAPDNRTLV 372

Query: 318 FESDREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           + S+R G  QLY+             +   +++ +   K      P +SP G  IAF + 
Sbjct: 373 YASERTGNWQLYMAKITRKEDPNFPNATLIEEEVLLPSKTVERRYPQYSPDGKEIAFIED 432

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRS--LIFSRKKDGDTGSKL 418
                 + V+  +  + R + + S            WSP G+   L F   +  D  S +
Sbjct: 433 RN---RLMVLNLETKKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRH-DPYSDI 488

Query: 419 YSIDLNGRNETLINTPAY-ASDPQWV 443
             +   G   T +    Y +  P+WV
Sbjct: 489 GIVSAQGGAITNLTNSGYMSGSPRWV 514



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 72/203 (35%), Gaps = 28/203 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R S +G   +   + D    IY V  Q     +LT       +  +SPD  QI F SDR 
Sbjct: 31  RISPDGSEIVFCYKGD----IYKVSAQGGTAVQLTTQASYEANPVWSPDGEQIAFASDRN 86

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFA 372
           G   L++M ++G   +R++    AS     ++P G  + F+             +     
Sbjct: 87  GNFDLFIMSADGGAARRLTY-HSASEIPSTFTPDGKYVLFSASIQDPATSALFPTSAMTE 145

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSID 422
           +  +  +G     ++     +   +  +G + ++  +K                 ++  D
Sbjct: 146 LYRVPVEGGNTEQVLGTP-AEWVCFDKAGSNFLYQDRKGFEDEWRKHHTSSIARDIWLYD 204

Query: 423 L-NGRNETLINTPAYASDPQWVG 444
              G +  L N      +P +  
Sbjct: 205 TQTGEHTNLTNRDGEDRNPVYAP 227



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/157 (28%), Positives = 68/157 (43%), Gaps = 21/157 (13%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T      A  SPD S+IVF      K  +Y + + G    +++        +PVWSP G+
Sbjct: 23  TPLWMRDARISPDGSEIVFCY----KGDIYKVSAQGGTAVQLTTQASYEA-NPVWSPDGE 77

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS-- 416
            IAF       F + +M  DG   R L   S  + P+ ++P G+ ++FS        S  
Sbjct: 78  QIAFASDRNGNFDLFIMSADGGAARRLTYHSASEIPSTFTPDGKYVLFSASIQDPATSAL 137

Query: 417 -------KLYSIDLNGRN-ETLINTPAYASDPQWVGF 445
                  +LY + + G N E ++ TPA      WV F
Sbjct: 138 FPTSAMTELYRVPVEGGNTEQVLGTPAE-----WVCF 169



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 74/213 (34%), Gaps = 29/213 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ ++VA+    D        + +      K+I N  +      F+ + +  + + ++ 
Sbjct: 325 SPDGKQVAFIVRGD------VFVTSTDYPTTKQITNTPAGESGLSFAPDNRTLVYASERT 378

Query: 280 EAMDIYSVDLQSNATERLTNTLFINIS------------ASYSPDSSQIVFESDREGKEQ 327
               +Y   +         N   I                 YSPD  +I F  DR    +
Sbjct: 379 GNWQLYMAKITRKEDPNFPNATLIEEEVLLPSKTVERRYPQYSPDGKEIAFIEDR---NR 435

Query: 328 LYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKKDG 380
           L V+       ++++           FD  WSP G    + F     + +  IG++   G
Sbjct: 436 LMVLNLETKKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDIGIVSAQG 495

Query: 381 SQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
                L     +  +P W   G +++F  ++ G
Sbjct: 496 GAITNLTNSGYMSGSPRWVLDGNAVLFQTERYG 528



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 87/234 (37%), Gaps = 32/234 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +  +    
Sbjct: 43  YKGDIYKVSAQGGTAVQLTTQAS-YEANPVWSPDGEQIAFASDRNGNFDLFIM--SADGG 99

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATERL 297
           A +R+    +  +   F+ +GK  L S    +             ++Y V ++   TE++
Sbjct: 100 AARRLTYHSASEIPSTFTPDGKYVLFSASIQDPATSALFPTSAMTELYRVPVEGGNTEQV 159

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +    S  +++ DR+G                +++  +   +   ++ +
Sbjct: 160 LGTPAEWV--CFDKAGSNFLYQ-DRKGFEDEWRKHHTSSIARDIWLYDTQTGEHTNLT-N 215

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           ++    +PV++P G  + F ++ +G  F +     +  Q+   V         +
Sbjct: 216 RDGEDRNPVYAPDGKSVYFLSERNGGSFNVYSFPLNAPQQVKPVTTFRTHPVRF 269



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 77/197 (39%), Gaps = 14/197 (7%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V        K+  ++PA    ++    +      +   G++   +  ++          +
Sbjct: 341 VTSTDYPTTKQITNTPAGESGLSFAPDNRTLVYASERTGNWQLYMAKITRKEDPNFPNAT 400

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L            L PS+      P++SP+ +++A+   +D + L V  ++T+  R    
Sbjct: 401 LI-------EEEVLLPSKTVERRYPQYSPDGKEIAF--IEDRNRLMVLNLETKKVRQVTD 451

Query: 253 IGNF--RSMILAPRFSSNGKRA---LISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              +          +S +GK      I  + D   DI  V  Q  A   LTN+ +++ S 
Sbjct: 452 GSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDIGIVSAQGGAITNLTNSGYMSGSP 511

Query: 308 SYSPDSSQIVFESDREG 324
            +  D + ++F+++R G
Sbjct: 512 RWVLDGNAVLFQTERYG 528


>gi|320102987|ref|YP_004178578.1| WD40-like beta Propeller containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319750269|gb|ADV62029.1| WD40-like beta Propeller containing protein [Isosphaera pallida
           ATCC 43644]
          Length = 494

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 88/271 (32%), Gaps = 22/271 (8%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIK----NSLCVMDRDGANIRYLTPSRDQIL- 214
           D  +      +   + R L        G         L     D   IR     + +++ 
Sbjct: 223 DQGFARAADPRWAPDGRKLAFVGFNSQGSDPLIYLIRLIEQTDDQGTIRLQPDGKPRVVA 282

Query: 215 --FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---------P 263
               P +S + + +AY       +   +    R       +    S   A         P
Sbjct: 283 AGVTPTWSSDGRCLAYVASGTPPLQTDWSAPGRNQERIVILTLEGSDAGASRVLVEGIEP 342

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            ++    R      +    D+           +LTN    +    ++ D S+++F S+R 
Sbjct: 343 SWNPRDDRLAFVKVRGGNTDLALTRAAGGGITQLTNHPARDGWPIWTHDGSELIFLSNRT 402

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSG-EKFAIGVMKKDG 380
            +  L+ +  N    +RI    +    +     SP G  + FT+  G     I ++    
Sbjct: 403 NRWDLFKIDPN--QPERIMPFTQHRLREDRADLSPDGLRLLFTERWGLPDSRIVLLDLSR 460

Query: 381 SQERLLVEDSN-LQAPTWSPSGRSLIFSRKK 410
            Q  +L E  N  +   WSP GR + F  ++
Sbjct: 461 DQTVILTEAPNGDREAVWSPDGRWIAFVSRR 491



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 46/298 (15%), Positives = 116/298 (38%), Gaps = 34/298 (11%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI-LFEPRFSPNQQKVAYATY-DDEDIL 237
                      + L ++   G+++  +   +      +PR++P+ +K+A+  +       
Sbjct: 194 PLFQGQPATDDSRLFLVTPQGSDLTMIAEDQGFARAADPRWAPDGRKLAFVGFNSQGSDP 253

Query: 238 RVYLM----DTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQKDEAMDI-YSVD 288
            +YL+     T      +   + +  ++A    P +SS+G+           +   +S  
Sbjct: 254 LIYLIRLIEQTDDQGTIRLQPDGKPRVVAAGVTPTWSSDGRCLAYVASGTPPLQTDWSAP 313

Query: 289 LQSNATERLTNTLFINI----------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            ++     +      +             S++P   ++ F   R G   L + ++ G   
Sbjct: 314 GRNQERIVILTLEGSDAGASRVLVEGIEPSWNPRDDRLAFVKVRGGNTDLALTRAAGGGI 373

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-- 396
            +++ +  A    P+W+  G  + F      ++ +  +  +  +  +      L+     
Sbjct: 374 TQLT-NHPARDGWPIWTHDGSELIFLSNRTNRWDLFKIDPNQPERIMPFTQHRLREDRAD 432

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA--------YASDPQWVGFM 446
            SP G  L+F+ ++ G   S++  +DL+ R++T+I T A        ++ D +W+ F+
Sbjct: 433 LSPDGLRLLFT-ERWGLPDSRIVLLDLS-RDQTVILTEAPNGDREAVWSPDGRWIAFV 488



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 94/276 (34%), Gaps = 36/276 (13%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIR---YLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + +  +  S  ++  L      G   R   +           PR   + +   +      
Sbjct: 145 MVMLRAERSDRLRAVLRERPGRGQPERVSEWELERSQPAPERPR--NSGRPPLFQGQPAT 202

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDEAMD--IYSVDL- 289
           D  R++L+ T        I   +    A  PR++ +G++        +  D  IY + L 
Sbjct: 203 DDSRLFLV-TPQGSDLTMIAEDQGFARAADPRWAPDGRKLAFVGFNSQGSDPLIYLIRLI 261

Query: 290 ---QSNATERL-----TNTLFINISASYSPDSSQIVFESDREGKEQLYV-MQSNGSDQKR 340
                  T RL        +   ++ ++S D   + + +   G   L     + G +Q+R
Sbjct: 262 EQTDDQGTIRLQPDGKPRVVAAGVTPTWSSDGRCLAYVA--SGTPPLQTDWSAPGRNQER 319

Query: 341 I---SQDKEASYFD--------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-E 388
           I   + +   +           P W+P+ D +AF K  G    + + +  G     L   
Sbjct: 320 IVILTLEGSDAGASRVLVEGIEPSWNPRDDRLAFVKVRGGNTDLALTRAAGGGITQLTNH 379

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +    P W+  G  LIF   +       L+ ID N
Sbjct: 380 PARDGWPIWTHDGSELIFLSNRTNRW--DLFKIDPN 413



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 24/156 (15%)

Query: 313 SSQIVFESDREGKE-QLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFS--G 368
               +F+      + +L+++   GSD   I++D   A   DP W+P G  +AF  F+  G
Sbjct: 191 GRPPLFQGQPATDDSRLFLVTPQGSDLTMIAEDQGFARAADPRWAPDGRKLAFVGFNSQG 250

Query: 369 EKFAIGVMKK----DGSQERLLVEDSNLQA------PTWSPSGRSLIFSRK--------- 409
               I +++     D      L  D   +       PTWS  GR L +            
Sbjct: 251 SDPLIYLIRLIEQTDDQGTIRLQPDGKPRVVAAGVTPTWSSDGRCLAYVASGTPPLQTDW 310

Query: 410 -KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              G    ++  + L G +           +P W  
Sbjct: 311 SAPGRNQERIVILTLEGSDAGASRVLVEGIEPSWNP 346


>gi|299537211|ref|ZP_07050514.1| putative peptidase [Lysinibacillus fusiformis ZC1]
 gi|298727452|gb|EFI68024.1| putative peptidase [Lysinibacillus fusiformis ZC1]
          Length = 662

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 91/263 (34%), Gaps = 55/263 (20%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNG 269
           + +P+ SP+  +V Y     ++    Y+ +       D+ P++         +P +S +G
Sbjct: 18  VADPQLSPDGTEVVYIETRMDEKKNDYISNLFYINLKDKTPQQWTFGEDRTSSPVWSPDG 77

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---------- 319
            +      +     IY +       +++T+      S  +SP   +I F           
Sbjct: 78  SQIAFLSTRTGKSQIYVLSKAGGEAKQVTHCKNGATSPVWSPCGKKIAFSVVLGKDETIL 137

Query: 320 ------------------------SDREG------KEQLYVMQSNGSDQKRISQDKEASY 349
                                   SD  G         + ++     + +++++ KE  +
Sbjct: 138 DKAEDEKKKDKELKPLEIEKMKHKSDAGGFIDMEQFTHIAMVNVESGELEQVTEGKEYFH 197

Query: 350 FDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGR 402
               WSP G  + +     E         I +++ +  Q   L E S     T WSP+ R
Sbjct: 198 LG-TWSPDGKYLTYLADKAEDLDFSFNVDIYLLELETKQSHKLTEGSGAYYQTAWSPNSR 256

Query: 403 SLIFS---RKKDGDTGSKLYSID 422
            L F    R+ +  T +KL+  D
Sbjct: 257 YLSFVGGEREFENATQAKLWIYD 279



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/390 (13%), Positives = 126/390 (32%), Gaps = 86/390 (22%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS----SPASWRKIAHTISDDIYQSITGEK 170
           ++  +G + + +E R+ D K    I    + +    +P  W       S  ++       
Sbjct: 22  QLSPDGTEVVYIETRM-DEKKNDYISNLFYINLKDKTPQQWTFGEDRTSSPVW----SPD 76

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   S+I F+S        K+ + V+ + G   + +T  ++     P +SP  +K+A++ 
Sbjct: 77  G---SQIAFLSTRTG----KSQIYVLSKAGGEAKQVTHCKNGATS-PVWSPCGKKIAFSV 128

Query: 231 ---------------------------------------YDDEDILRVYLMDTRIDRAPK 251
                                                   D E    + +++       +
Sbjct: 129 VLGKDETILDKAEDEKKKDKELKPLEIEKMKHKSDAGGFIDMEQFTHIAMVNVESGEL-E 187

Query: 252 RIGNFRSMILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           ++   +       +S +GK           +     +DIY ++L++  + +LT       
Sbjct: 188 QVTEGKEYFHLGTWSPDGKYLTYLADKAEDLDFSFNVDIYLLELETKQSHKLTEGSGAYY 247

Query: 306 SASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPV------- 353
             ++SP+S  + F       +   + +L++          ++ + +A   D V       
Sbjct: 248 QTAWSPNSRYLSFVGGEREFENATQAKLWIYDMEQKLLNCVTSEFDAPVGDFVIGDFLQG 307

Query: 354 -------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPSGRSLI 405
                  W        F        AI     DG     + +D  +   +  + + ++++
Sbjct: 308 VASPRVQWMNDNHSFYFQVTDHGNAAIYYGNVDGEIYPAIHDDQYVYGFSLDAQNDQAIV 367

Query: 406 FSRKKDGDTGSKLYSIDL-NGRNETLINTP 434
                       L+ ++L  G  E L +  
Sbjct: 368 AISTTTNPG--DLFYVNLKTGAKEQLTSIN 395


>gi|116624690|ref|YP_826846.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227852|gb|ABJ86561.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 595

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 50/249 (20%), Positives = 96/249 (38%), Gaps = 28/249 (11%)

Query: 214 LFEPRFSPNQQKVAYATYDDE---DILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNG 269
           +  PR +P+     Y    ++   D +   L    I+   P+RI        +PR+S + 
Sbjct: 33  IASPRINPDGTDAVYVETWNDRATDRVCANLWQVAIEKGTPQRITEGPWRDSSPRWSPD- 91

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R      +  +  I+   +     E+LT+      S ++SPD   + F      +++L+
Sbjct: 92  SRLAWISDRTGSPQIWVRRM--GGAEKLTDLTAPPQSLAWSPDGKSLAFTM----RDRLF 145

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----------FSGEKFAIGVMKKD 379
           V+ + G   +     +   + +P W P G  I  +             GE +AI +   D
Sbjct: 146 VVPAAGGKPREFPLGELEIHGEPAWMPDGQSILVSAAPPPNAANVLQGGEIYAIRL--AD 203

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG---SKLYSIDLNGRNETLI--NTP 434
           G++ +L       + P  SP G  + +  ++        SKLY  + +G    ++  +  
Sbjct: 204 GTRRQLTQHPGPDEDPVPSPDGSRIAWIAREPKPQSYVVSKLYVANPDGSRAKVLAGSLD 263

Query: 435 AYASDPQWV 443
                PQW 
Sbjct: 264 RDVRHPQWS 272



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 98/273 (35%), Gaps = 28/273 (10%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
               +  +  +L  +  +    + +T         PR+SP+  ++A+ +       ++++
Sbjct: 52  NDRATDRVCANLWQVAIEKGTPQRITEG-PWRDSSPRWSPD-SRLAWISDRTGSP-QIWV 108

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                      +      +    +S +GK    +++      ++ V              
Sbjct: 109 RRMGGAEKLTDLTAPPQSL---AWSPDGKSLAFTMR----DRLFVVPAAGGKPREFPLGE 161

Query: 302 -FINISASYSPDSSQIVFESDREGK-------EQLYVMQSNGSDQKRISQDKEASYFDPV 353
             I+   ++ PD   I+  +             ++Y ++     +++++Q       DPV
Sbjct: 162 LEIHGEPAWMPDGQSILVSAAPPPNAANVLQGGEIYAIRLADGTRRQLTQ-HPGPDEDPV 220

Query: 354 WSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIF 406
            SP G  IA+     +        + V   DGS+ ++L    D +++ P WS   R++ F
Sbjct: 221 PSPDGSRIAWIAREPKPQSYVVSKLYVANPDGSRAKVLAGSLDRDVRHPQWSSDSRTIYF 280

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                G T   +Y+   +G    +   P   S+
Sbjct: 281 LADDHGAT--YVYAARNDGSVRQVTKAPDRLSE 311



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 113/332 (34%), Gaps = 52/332 (15%)

Query: 94  PDSIPRFQDWNSL--------GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF 145
           P +   +  W  +        G   +          DR+     LW V   K   G    
Sbjct: 21  PLTPDDWWAWREIASPRINPDGTDAVYVETWNDRATDRVCAN--LWQVAIEK---GTPQR 75

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
            +   WR              +  +   +SR+ ++S+   S      + V    GA    
Sbjct: 76  ITEGPWRD-------------SSPRWSPDSRLAWISDRTGSP----QIWVRRMGGAEKLT 118

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
              +  Q L    +SP+ + +A+   D     R++++     +  +       +   P +
Sbjct: 119 DLTAPPQSL---AWSPDGKSLAFTMRD-----RLFVVPAAGGKPREFPLGELEIHGEPAW 170

Query: 266 SSNGKRALISVQKDEAM-------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +G+  L+S              +IY++ L      +LT     +     SPD S+I +
Sbjct: 171 MPDGQSILVSAAPPPNAANVLQGGEIYAIRLADGTRRQLTQHPGPDEDPVPSPDGSRIAW 230

Query: 319 ESDREGKEQ------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            + RE K Q      LYV   +GS  K ++   +     P WS     I F         
Sbjct: 231 IA-REPKPQSYVVSKLYVANPDGSRAKVLAGSLDRDVRHPQWSSDSRTIYFLADDHGATY 289

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           +   + DGS  ++      L   + + +GR++
Sbjct: 290 VYAARNDGSVRQVTKAPDRLSEFSVADTGRAI 321


>gi|302141778|emb|CBI18981.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 95/308 (30%), Gaps = 47/308 (15%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY--ATYDDE 234
           I   +  + S      L  +  +         S     F P  SP+  ++ Y     D  
Sbjct: 200 IAVATRRLNSDYRHIELFDLLSNEFRELTRRISPQTHHFNPFISPDSTRIGYHRCRGDSN 259

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                +L+   +      I  FR     P FS  G R        E   +Y V+   +  
Sbjct: 260 GGKSPHLLLENLKSPLPEISLFRFDGSFPSFSPGGDRIAYV----EFPGVYVVNRDGSGR 315

Query: 295 ERLTNTLFINISASYSPDSSQIVFES------DREGKEQLYVMQSN------------GS 336
             + + +  +   ++      +V+ S          K  +  +  +            G 
Sbjct: 316 REVFSGIAFST--AWDHKRKGVVYTSAGPTFATESTKVDIVSINVDDVDQPSYKKLTTGG 373

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEKFAIGVMKKDGSQERLLVEDS-- 390
              R++ +   +     WSP GD I F        G  F + V+  +G+  R +V     
Sbjct: 374 GIHRLT-EGPWTDTMCNWSPDGDWIVFASDRENPGGGGFELYVIHPNGTGLRKVVHSGSA 432

Query: 391 -NLQAPTWSPSGRSLIFSRKKDG------------DTGSKLYSIDLNGRN-ETLINTPAY 436
                P +SP G+S++F+                      ++ ++L+G     L +    
Sbjct: 433 GRTNHPWFSPDGKSIVFTSDYAAVSAEPISNAHHYQPYGDIFVVNLDGSGLHRLTHNSYE 492

Query: 437 ASDPQWVG 444
              P W  
Sbjct: 493 DGTPAWAP 500



 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 69/359 (19%), Positives = 124/359 (34%), Gaps = 70/359 (19%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
           + +    +++T P  +  F    S G +  +     +   D   +E  L+D+        
Sbjct: 171 VPRKMVIERVT-PPGLHAFTPATSPGNKNFIAVATRRLNSDYRHIE--LFDLLS------ 221

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
                    +R++   IS   +        D ++RI +      S   K+   ++     
Sbjct: 222 -------NEFRELTRRISPQTHHFNPFISPD-STRIGYHRCRGDSNGGKSPHLLL----E 269

Query: 202 NIRYLTPSRDQILF---EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           N++   P      F    P FSP   ++AY  +       VY+++       +    F  
Sbjct: 270 NLKSPLPEISLFRFDGSFPSFSPGGDRIAYVEF-----PGVYVVNRDGSGRREV---FSG 321

Query: 259 MILAPRFSSNGKRALISV------QKDEAMDIYSVDLQ------------SNATERLTNT 300
           +  +  +    K  + +        +   +DI S+++                  RLT  
Sbjct: 322 IAFSTAWDHKRKGVVYTSAGPTFATESTKVDIVSINVDDVDQPSYKKLTTGGGIHRLTEG 381

Query: 301 LFINISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-S 355
            + +   ++SPD   IVF SDR     G  +LYV+  NG+  +++     A   +  W S
Sbjct: 382 PWTDTMCNWSPDGDWIVFASDRENPGGGGFELYVIHPNGTGLRKVVHSGSAGRTNHPWFS 441

Query: 356 PQGDLIAFT--------------KFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSP 399
           P G  I FT                      I V+  DGS    L  +S     P W+P
Sbjct: 442 PDGKSIVFTSDYAAVSAEPISNAHHYQPYGDIFVVNLDGSGLHRLTHNSYEDGTPAWAP 500



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 86/255 (33%), Gaps = 38/255 (14%)

Query: 214 LFEPRFSP-NQQKVAYATYDDEDILR-VYLMDTRIDRAPK--RIGNFRSMILAPRFSSNG 269
            F P  SP N+  +A AT       R + L D   +   +  R  + ++    P  S + 
Sbjct: 187 AFTPATSPGNKNFIAVATRRLNSDYRHIELFDLLSNEFRELTRRISPQTHHFNPFISPDS 246

Query: 270 KRALISVQKDEA-----MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            R      + ++       +   +L+S     ++   F     S+SP   +I +      
Sbjct: 247 TRIGYHRCRGDSNGGKSPHLLLENLKS-PLPEISLFRFDGSFPSFSPGGDRIAYVEF--- 302

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---------EKFAIGV 375
              +YV+  +GS ++ +        F   W  +   + +T             +  +I V
Sbjct: 303 -PGVYVVNRDGSGRREV---FSGIAFSTAWDHKRKGVVYTSAGPTFATESTKVDIVSINV 358

Query: 376 MKKD----------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--GDTGSKLYSIDL 423
              D          G   RL           WSP G  ++F+  ++  G  G +LY I  
Sbjct: 359 DDVDQPSYKKLTTGGGIHRLTEGPWTDTMCNWSPDGDWIVFASDRENPGGGGFELYVIHP 418

Query: 424 NGRNETLINTPAYAS 438
           NG     +     A 
Sbjct: 419 NGTGLRKVVHSGSAG 433



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 61/177 (34%), Gaps = 26/177 (14%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD--QILFEPR------ 218
              KG   +       +  + +   S+ V D D  + + LT      ++   P       
Sbjct: 330 HKRKGVVYTSAGPTFATESTKVDIVSINVDDVDQPSYKKLTTGGGIHRLTEGPWTDTMCN 389

Query: 219 FSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALI 274
           +SP+   + +A+  +        +Y++        K +          P FS +GK  + 
Sbjct: 390 WSPDGDWIVFASDRENPGGGGFELYVIHPNGTGLRKVVHSGSAGRTNHPWFSPDGKSIVF 449

Query: 275 SVQK--------------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +                     DI+ V+L  +   RLT+  + + + +++P   + V
Sbjct: 450 TSDYAAVSAEPISNAHHYQPYGDIFVVNLDGSGLHRLTHNSYEDGTPAWAPKVIRPV 506


>gi|212692527|ref|ZP_03300655.1| hypothetical protein BACDOR_02023 [Bacteroides dorei DSM 17855]
 gi|212664938|gb|EEB25510.1| hypothetical protein BACDOR_02023 [Bacteroides dorei DSM 17855]
          Length = 1084

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 107/270 (39%), Gaps = 33/270 (12%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V +     +R+L+   +  L    ++ + +   Y     +   +V +  TR D+     
Sbjct: 256 TVTNFKTHPVRFLSMGSNGTLC---YTYDGE--IYTQKQGDKPQKVKIDITRDDQNTIAD 310

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            NF +   +   S +GK+    V+     +++      N T+++T+T       ++SPD+
Sbjct: 311 LNFSNGATSATVSPDGKQIAFIVRG----EVFVTSADYNTTKQITHTPAREAGLTFSPDN 366

Query: 314 SQIVFESDREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             + + S+R G  +LY+             +   +++ +    +     P +SP G  +A
Sbjct: 367 RTLAYASERNGNWELYMAKIARKEEANFPNATTIEEEVLLPSDKTERTYPQFSPDGKELA 426

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFSRKKDGDT 414
           F +       + V+  +  + R + + +   +       +WSP G+   L F   +  D 
Sbjct: 427 FIEDRN---RLMVLNLETKKVRQVTDGATWFSTGGGFDYSWSPDGKWFTLEFIGNRH-DP 482

Query: 415 GSKLYSIDLNGRNETLINTPAY-ASDPQWV 443
            S +  ++  G     +    Y +  P+WV
Sbjct: 483 YSDIGMVNAQGGKIINLTNSGYTSGSPRWV 512



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A+    +        + +      K+I +  +      FS + +    + +
Sbjct: 321 TVSPDGKQIAFIVRGE------VFVTSADYNTTKQITHTPAREAGLTFSPDNRTLAYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN------------ISASYSPDSSQIVFESDREGK 325
           ++   ++Y   +         N   I                 +SPD  ++ F  DR   
Sbjct: 375 RNGNWELYMAKIARKEEANFPNATTIEEEVLLPSDKTERTYPQFSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  IG++  
Sbjct: 432 NRLMVLNLETKKVRQVTDGATWFSTGGGFDYSWSPDGKWFTLEFIGNRHDPYSDIGMVNA 491

Query: 379 DGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG 412
            G +   L        +P W   G +++F  ++ G
Sbjct: 492 QGGKIINLTNSGYTSGSPRWVLDGNAILFITERYG 526



 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 72/201 (35%), Gaps = 28/201 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G       + D    IY V        +LT       +  +SPDS QI F SDR G 
Sbjct: 31  SPDGTEIAFCYKGD----IYKVPSNGGTATQLTTQASYECNPIWSPDSKQIAFASDRNGN 86

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----------IG 374
             L+VM ++G   +R++    AS     ++  G+ I F+    +              + 
Sbjct: 87  FDLFVMSADGGAARRLTT-HSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTELY 145

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSIDL- 423
            +   G +   ++     +   +  SG++ ++  +K                 ++  +  
Sbjct: 146 KVPVTGGRTEQVLGTP-AEMVCFDKSGKTFLYQDRKGFEDEWRKHHTSSITRDVWLYNSE 204

Query: 424 NGRNETLINTPAYASDPQWVG 444
           NG++  L        +P +  
Sbjct: 205 NGKHTNLTAHAGEDRNPVFAP 225



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 80/230 (34%), Gaps = 34/230 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S    P +S + K+   +  +
Sbjct: 30  ISPDGTEIAFCY--KGDIYKV----PSNGGTATQLTTQASYECNPIWSPDSKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
           +   D++ +     A  RLT      I ++++ D + I+F +                 +
Sbjct: 84  NGNFDLFVMSADGGAARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTE 143

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +   G   +++     A       S  G    +               S     + +
Sbjct: 144 LYKVPVTGGRTEQVL-GTPAEMVCFDKS--GKTFLYQDRKGFEDEWRKHHTSSITRDVWL 200

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +  +   L       + P ++P G+++ F  +++G T   +YS  ++
Sbjct: 201 YNSENGKHTNLTAHAGEDRNPVFAPDGQTVYFLSERNGGT-FNVYSFPIS 249



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 88/254 (34%), Gaps = 32/254 (12%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +  +G     LT         P +SP+ +++A+A+  + +     +  +    
Sbjct: 41  YKGDIYKVPSNGGTATQLTTQAS-YECNPIWSPDSKQIAFASDRNGNFDLFVM--SADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATERL 297
           A +R+    +  +   F+++G   L S    +             ++Y V +    TE++
Sbjct: 98  AARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTELYKVPVTGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  S       ++  
Sbjct: 158 LGTPAEMV--CFDKSGKTFLYQ-DRKGFEDEWRKHHTSSITRDVWLYNSENGKHTNLT-A 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                 +PV++P G  + F ++ +G  F +        Q    V +       +   G +
Sbjct: 214 HAGEDRNPVFAPDGQTVYFLSERNGGTFNVYSFPISSPQSLETVTNFKTHPVRFLSMGSN 273

Query: 404 LIFSRKKDGDTGSK 417
                  DG+  ++
Sbjct: 274 GTLCYTYDGEIYTQ 287



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
            SP G  IAF         I  +  +G     L   ++ +  P WSP  + + F+  ++G
Sbjct: 30  ISPDGTEIAFCYKGD----IYKVPSNGGTATQLTTQASYECNPIWSPDSKQIAFASDRNG 85

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +    L+ +  +G     + T + +  P 
Sbjct: 86  NF--DLFVMSADGGAARRLTTHSASEIPS 112



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 58/357 (16%), Positives = 123/357 (34%), Gaps = 55/357 (15%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEK 170
             V  +GK     V   ++ V        K+   +PA  R+   T S D       +   
Sbjct: 320 ATVSPDGKQIAFIVRGEVF-VTSADYNTTKQITHTPA--REAGLTFSPDNRTLAYASERN 376

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G++   +  ++    +     +             L PS       P+FSP+ +++A+  
Sbjct: 377 GNWELYMAKIARKEEANFPNATTI-------EEEVLLPSDKTERTYPQFSPDGKELAFI- 428

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNF-----RSMILAPRFSSNGKRA---LISVQKDEAM 282
              ED  R+ +++    +  +++ +              +S +GK      I  + D   
Sbjct: 429 ---EDRNRLMVLNLET-KKVRQVTDGATWFSTGGGFDYSWSPDGKWFTLEFIGNRHDPYS 484

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----------QLYVM 331
           DI  V+ Q      LTN+ + + S  +  D + I+F ++R G              L  M
Sbjct: 485 DIGMVNAQGGKIINLTNSGYTSGSPRWVLDGNAILFITERYGMRAHASWGSLNDVMLVFM 544

Query: 332 QSNGSDQKRISQDKE----------------ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             +  D+ R+S++                            +       +   +   + +
Sbjct: 545 NQDAYDKFRLSKEDYELQKELEKEQKNTTETKKNGKKKGDNKEKSEEKKEEKVKDIVVEL 604

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              +    RL    S+L +   +  G +L +    +G  G  L+ ++L  ++  L++
Sbjct: 605 SNIEDRIVRLTPNSSDLGSAIITKDGETLYYLSAFEG--GYDLWKMNLRKKDTKLLH 659


>gi|20090389|ref|NP_616464.1| TolB protein [Methanosarcina acetivorans C2A]
 gi|19915397|gb|AAM04944.1| TolB protein-like protein [Methanosarcina acetivorans C2A]
          Length = 577

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 60/268 (22%), Positives = 114/268 (42%), Gaps = 29/268 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
              + + L ++DRDG  ++ LT + D++     +S + +K+AY+T   ED      +   
Sbjct: 173 KDPLNDQLYLIDRDGYVLQKLTDTSDRVETAI-WSNDGKKIAYSTGQTEDEETGLWIINE 231

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--I 303
                KR+ N   +++   +S +  R       DE   +YS+ +      +L+   F   
Sbjct: 232 NGTENKRLDN--GIVIG--WSPDDSRIYYV---DENFSLYSIKVDGTDRFQLSTKSFSRN 284

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               S+SPD   ++F +  +    +++  S G + + + +      F P WSP+GD IAF
Sbjct: 285 EDVFSFSPDRKSLIFSTVNDEGVTMFLTDSTGKNVQVLEEFSGRCVFKPSWSPKGDKIAF 344

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL-------IFSRKKDGDTGS 416
           T+ +     +  +  DG+ ++L+          W PSG  +       +F    DG T  
Sbjct: 345 TQGTD----LHTINPDGTGKKLISSAITDYE--WHPSGDFISFIASDSVFVASPDGSTKI 398

Query: 417 KLYSIDLNGRNETLINT---PAYASDPQ 441
           +L     +G N   +N      ++ D  
Sbjct: 399 QL---TEDGDNYRFLNDKYLSGWSPDGS 423



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 59/312 (18%), Positives = 119/312 (38%), Gaps = 46/312 (14%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-------------IL 214
               D +  ++    + ++G    ++ V++ DG+ IR L  + +                
Sbjct: 37  SWSPDGSRLVIDAFFNPMTGTRLYAVYVLNADGSGIRELASTPNNTKERSLSIRGVYYPF 96

Query: 215 FEPRFSPNQQKVA----------YATYDDEDILRVYLMD----TRIDRAPKRIGNFRSMI 260
              ++SP+  ++           +    D D   +        T +D   + I +     
Sbjct: 97  SWSQWSPDGSRIGIFANIFTVRDFYVIADPDNTLIKTAGKCNYTTVDNIRENILDLE-WQ 155

Query: 261 LAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
               ++    +ALI + KD     +Y +D      ++LT+T     +A +S D  +I + 
Sbjct: 156 TNFIWNPEDTKALIIMDKDPLNDQLYLIDRDGYVLQKLTDTSDRVETAIWSNDGKKIAYS 215

Query: 320 SDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           + +  + +  L+++  NG++ KR+            WSP    I +     E F++  +K
Sbjct: 216 TGQTEDEETGLWIINENGTENKRLDNG-----IVIGWSPDDSRIYYV---DENFSLYSIK 267

Query: 378 KDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-- 432
            DG+    L       N    ++SP  +SLIFS     D G  ++  D  G+N  ++   
Sbjct: 268 VDGTDRFQLSTKSFSRNEDVFSFSPDRKSLIFSTV--NDEGVTMFLTDSTGKNVQVLEEF 325

Query: 433 TPAYASDPQWVG 444
           +      P W  
Sbjct: 326 SGRCVFKPSWSP 337



 Score = 76.6 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 89/214 (41%), Gaps = 30/214 (14%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
           +SRI +V E+        SL  +  DG +   L T S  +      FSP+++ + ++T +
Sbjct: 251 DSRIYYVDEN-------FSLYSIKVDGTDRFQLSTKSFSRNEDVFSFSPDRKSLIFSTVN 303

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           DE +     +     +  + +  F    +  P +S  G +   +    +  D+++++   
Sbjct: 304 DEGV--TMFLTDSTGKNVQVLEEFSGRCVFKPSWSPKGDKIAFT----QGTDLHTINPDG 357

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              ++L ++   +    + P    I F +     + ++V   +GS + ++++D +   F 
Sbjct: 358 TG-KKLISSAITDYE--WHPSGDFISFIA----SDSVFVASPDGSTKIQLTEDGDNYRFL 410

Query: 352 PV-----WSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  WSP G  +  +        + ++K +G
Sbjct: 411 NDKYLSGWSPDGSRLLIS---NGSTDLSMIKLEG 441


>gi|154493795|ref|ZP_02033115.1| hypothetical protein PARMER_03138 [Parabacteroides merdae ATCC
           43184]
 gi|154086408|gb|EDN85453.1| hypothetical protein PARMER_03138 [Parabacteroides merdae ATCC
           43184]
          Length = 1079

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 74/202 (36%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y V        RLT+ +   +   +SPD   I F    +G  +
Sbjct: 34  NGNEIVFSYAGD----LYKVPATGGEARRLTSHVGYEMFPRFSPDGKTIAFTGQYDGNTE 89

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKF--AIG 374
           +Y M   G +  R++       D       P      W+P G  I +     + F   + 
Sbjct: 90  VYTMPVTGGEPLRVTYTATNSRDDLGDRMGPNNIVMTWTPDGSRIVYRNRISDGFSGKLF 149

Query: 375 VMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSIDL 423
            ++K+G   +   L E       ++SP G+ L ++R            G     ++    
Sbjct: 150 TVEKEGGLSEAIPLPEGGFC---SYSPDGKQLAYNRVMREFRTWKYYKGGMADDVWIYSS 206

Query: 424 NGRN-ETLINTPAYASDPQWVG 444
           + +  E + + PA    P W+G
Sbjct: 207 DKKTVENITDNPAQDIIPMWIG 228



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 60/342 (17%), Positives = 142/342 (41%), Gaps = 26/342 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKK-FFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            +   +R+  EFR W             + S   +   I    + DI     G++  F S
Sbjct: 176 KQLAYNRVMREFRTWKYYKGGMADDVWIYSSDKKTVENITDNPAQDIIPMWIGDEIFFLS 235

Query: 176 -RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   ++  V +   K +  V D    ++++ + + + I+FE     N   +       +
Sbjct: 236 DRDRTMNIFVYNTKTKQTDKVTDFTEYDVKFPSANGNTIVFE-----NGGYIYKMDAGSK 290

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +V +  T  +   +  I +    I     S +G+R +++ +     +++++ ++   
Sbjct: 291 KPEKVNITLTSDNIYARSEIKDGADYITEACLSPDGERLVVTARG----EVFNLPVEKGV 346

Query: 294 TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ +T +    + +A +SPD   IV+ SD  G+ +LY+  + G +  ++++D +      
Sbjct: 347 TKNITRSPGAHDRNAQWSPDGKFIVYISDATGETELYMQDAIGGEHVQLTKDNDTYIRGF 406

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
             SP    + +T        + ++     +   L++D     +  T+SP  + L ++R  
Sbjct: 407 ELSPDSKAVVYTDRKN---RMNLLDVATKKVTTLLQDPMGEPRGVTFSPDSKWLTYTRT- 462

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
             +  S +Y  +L  + E  +        +P +++D +++ F
Sbjct: 463 GNNEYSIVYVYNLAEKKEYPVTDKWYDSSSPVFSTDGKYLVF 504



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 85/255 (33%), Gaps = 11/255 (4%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  + S  G    F +          S   +     +  D    R         + E   
Sbjct: 263 DVKFPSANGNTIVFENGGYIYKMDAGSKKPEKVNITLTSDNIYARSEIKDGADYITEACL 322

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +++      +     V+ +            +  +     ++S +GK  +      
Sbjct: 323 SPDGERLVVTARGE-----VFNLPVEKGVTKNITRSPGAHDRNAQWSPDGKFIVYISDAT 377

Query: 280 EAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              ++Y  D       +LT +          SPDS  +V+  DR  K ++ ++       
Sbjct: 378 GETELYMQDAIGGEHVQLTKDNDTYIRGFELSPDSKAVVYT-DR--KNRMNLLDVATKKV 434

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLLVEDSNLQA-PT 396
             + QD         +SP    + +T+    +++I  V      +E  + +     + P 
Sbjct: 435 TTLLQDPMGEPRGVTFSPDSKWLTYTRTGNNEYSIVYVYNLAEKKEYPVTDKWYDSSSPV 494

Query: 397 WSPSGRSLIFSRKKD 411
           +S  G+ L+F+  +D
Sbjct: 495 FSTDGKYLVFASARD 509



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 55/280 (19%), Positives = 101/280 (36%), Gaps = 48/280 (17%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   R LT S       PRFSP+ + +A+    D +   VY M       P 
Sbjct: 45  DLYKVPATGGEARRLT-SHVGYEMFPRFSPDGKTIAFTGQYDGNT-EVYTMPV-TGGEPL 101

Query: 252 RIG------------NFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERL 297
           R+                   +   ++ +G R +    +    +  +++V+ +   +E +
Sbjct: 102 RVTYTATNSRDDLGDRMGPNNIVMTWTPDGSRIVYRNRISDGFSGKLFTVEKEGGLSEAI 161

Query: 298 TNTLFINISASYSPDSSQIVFES----DREGK-------EQLYVMQSNGSDQKRISQDKE 346
                     SYSPD  Q+ +       R  K       + +++  S+    + I+ D  
Sbjct: 162 PLPEG--GFCSYSPDGKQLAYNRVMREFRTWKYYKGGMADDVWIYSSDKKTVENIT-DNP 218

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSL 404
           A    P+W   GD I F         I V      Q   + +  + +++ P  S +G ++
Sbjct: 219 AQDIIPMW--IGDEIFFLSDRDRTMNIFVYNTKTKQTDKVTDFTEYDVKFP--SANGNTI 274

Query: 405 IFSRKKDGDTGSKLYSIDLNGR-----NETLINTPAYASD 439
           +F      + G  +Y +D   +     N TL +   YA  
Sbjct: 275 VF------ENGGYIYKMDAGSKKPEKVNITLTSDNIYARS 308



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 73/216 (33%), Gaps = 13/216 (6%)

Query: 159 SDDIYQSITGEKG--DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           SD+IY     + G        L      +    +  +  +  +    + +T S       
Sbjct: 301 SDNIYARSEIKDGADYITEACLSPDGERLVVTARGEVFNLPVEKGVTKNITRSPGAHDRN 360

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            ++SP+ + + Y + D      +Y+ D       +   +  + I     S + K  + + 
Sbjct: 361 AQWSPDGKFIVYIS-DATGETELYMQDAIGGEHVQLTKDNDTYIRGFELSPDSKAVVYT- 418

Query: 277 QKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQ---LYVMQ 332
             D    +  +D+ +     L           ++SPDS  + +   R G  +   +YV  
Sbjct: 419 --DRKNRMNLLDVATKKVTTLLQDPMGEPRGVTFSPDSKWLTYT--RTGNNEYSIVYVYN 474

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                +  ++ DK      PV+S  G  + F     
Sbjct: 475 LAEKKEYPVT-DKWYDSSSPVFSTDGKYLVFASARD 509



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 49/143 (34%), Gaps = 5/143 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                +  L + D  G     LT   D  +     SP+ + V Y    +    R+ L+D 
Sbjct: 374 SDATGETELYMQDAIGGEHVQLTKDNDTYIRGFELSPDSKAVVYTDRKN----RMNLLDV 429

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQSNATERLTNTLFI 303
              +    + +         FS + K    +   +    I Y  +L       +T+  + 
Sbjct: 430 ATKKVTTLLQDPMGEPRGVTFSPDSKWLTYTRTGNNEYSIVYVYNLAEKKEYPVTDKWYD 489

Query: 304 NISASYSPDSSQIVFESDREGKE 326
           + S  +S D   +VF S R+   
Sbjct: 490 SSSPVFSTDGKYLVFASARDFNP 512


>gi|262196288|ref|YP_003267497.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262079635|gb|ACY15604.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1599

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 108/265 (40%), Gaps = 20/265 (7%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             +V+     ++ V + DG+    +  S +  ++   FSP+ +++A A+ D    + V L 
Sbjct: 1153 RIVTSSADKTVRVWNGDGSGAPLVVGSHESEVWAAAFSPDGKQIATASQD----VFVRLW 1208

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            +     AP  +      +    F+ +G+  L +   D  + I+   L+ +    L     
Sbjct: 1209 NADGSGAPHVLSGHSGGVRCLDFNPDGRSLL-TASLDGELRIW--PLEGSEFTVLREHEA 1265

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S S+ PD    VF S       L +  ++G    R+    E+   D ++SP G  + 
Sbjct: 1266 GVNSISFHPDGQ--VFVS-ASADGTLRLWPADGRGSGRVLGRHESMATDAMFSPDGRYVV 1322

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK------DGDTGS 416
             + F G    +  +  DG+   L   D  + A  +SP G+ ++ + +       D   G 
Sbjct: 1323 SSAFDGSV-RVWEVDGDGTTLALRDHDGMVFAAAFSPDGQRIVTTSQDKTARVWDARDGR 1381

Query: 417  KLYSIDLNGRNETLINTPAYASDPQ 441
            +L  +D +G    ++   A++ D  
Sbjct: 1382 ELLVLDGHGG---VVVAAAFSPDGS 1403



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 97/264 (36%), Gaps = 24/264 (9%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              VVS     S+ V + DG          D ++F   FSP+ Q++   + D        +
Sbjct: 1319 RYVVSSAFDGSVRVWEVDGDGTTLALRDHDGMVFAAAFSPDGQRIVTTSQDK----TARV 1374

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D R  R    +     +++A  FS +G     +   D  + ++           L    
Sbjct: 1375 WDARDGRELLVLDGHGGVVVAAAFSPDGSLLA-TAAGDGVVRVWDAS-DGGIAAVLRGHT 1432

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  ++ PD  QI   S  +G  +++   ++GS + R+ +  E +     +SP G  +
Sbjct: 1433 AAVYGVAFRPDGRQIASAS-ADGTVRVW--NTDGSGESRVFRGHEDTVTWVDYSPDGTRL 1489

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +  + +   I     +G    L   +  +    +SP G S++ +     D   +++  
Sbjct: 1490 V-SSSNDKTVRIWPTLGEGEPVVLRGHEQWVNKARFSPDGASIVSASD---DRTIRIWR- 1544

Query: 422  DLNGRNETLINTPAYASDPQ-WVG 444
            DL+         P    DP+ W  
Sbjct: 1545 DLS---------PPSLRDPRLWSA 1559



 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 95/262 (36%), Gaps = 17/262 (6%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VS     +L +   DG     +    + +  +  FSP+ + V  + +D      V + + 
Sbjct: 1280 VSASADGTLRLWPADGRGSGRVLGRHESMATDAMFSPDGRYVVSSAFDG----SVRVWEV 1335

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              D     + +   M+ A  FS +G+R + +  +D+   ++           L     + 
Sbjct: 1336 DGDGTTLALRDHDGMVFAAAFSPDGQRIV-TTSQDKTARVWDA-RDGRELLVLDGHGGVV 1393

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            ++A++SPD S +       G   + V  ++      + +   A+ +   + P G  IA  
Sbjct: 1394 VAAAFSPDGSLLA---TAAGDGVVRVWDASDGGIAAVLRGHTAAVYGVAFRPDGRQIASA 1450

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               G    + V   DGS E  +       +    +SP G  L+ S     D   +++   
Sbjct: 1451 SADGT---VRVWNTDGSGESRVFRGHEDTVTWVDYSPDGTRLVSSSN---DKTVRIWPTL 1504

Query: 423  LNGRNETLINTPAYASDPQWVG 444
              G    L     + +  ++  
Sbjct: 1505 GEGEPVVLRGHEQWVNKARFSP 1526



 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 95/257 (36%), Gaps = 17/257 (6%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG    ++ +   DG     +    ++ +F   FSP+ +++A  + D      V L  
Sbjct: 986  VASGSGDGTVRLWSADGLGAPRVLHPHEETIFAVEFSPDGKRIATGSRDG----TVRLTS 1041

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  P  +      +++  F  +G R   S   D  + ++S D +      L     +
Sbjct: 1042 LEDGMPPVVLDGRGRGVMSVAFDRSGTRIA-SADVDGVIRVWSADGRE-PPVMLRGHDGV 1099

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +S ++SPD S++V            V  ++G     I +  E       +   G  I  
Sbjct: 1100 ILSIAFSPDGSRLV---SAGADATARVWGADGRSASVILRGHEDVVTSASFRGDGARIVT 1156

Query: 364  TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +        + V   DGS   L+V   +S + A  +SP G+ +  + +   D   +L++ 
Sbjct: 1157 SSADKT---VRVWNGDGSGAPLVVGSHESEVWAAAFSPDGKQIATASQ---DVFVRLWNA 1210

Query: 422  DLNGRNETLINTPAYAS 438
            D +G    L        
Sbjct: 1211 DGSGAPHVLSGHSGGVR 1227



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 68/214 (31%), Gaps = 12/214 (5%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + +V+     +  V D        +      ++    FSP+   +A A  D      V +
Sbjct: 1361 QRIVTTSQDKTARVWDARDGRELLVLDGHGGVVVAAAFSPDGSLLATAAGDG----VVRV 1416

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D         +    + +    F  +G++   S   D  + +++ D  S  +       
Sbjct: 1417 WDASDGGIAAVLRGHTAAVYGVAFRPDGRQIA-SASADGTVRVWNTD-GSGESRVFRGHE 1474

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                   YSPD +++V  S+    + + +  + G  +  + +  E       +SP G  I
Sbjct: 1475 DTVTWVDYSPDGTRLVSSSN---DKTVRIWPTLGEGEPVVLRGHEQWVNKARFSPDGASI 1531

Query: 362  AFTKFSGEKFAIG--VMKKDGSQERLLVEDSNLQ 393
              +        I   +        RL    +   
Sbjct: 1532 V-SASDDRTIRIWRDLSPPSLRDPRLWSATTYCM 1564



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 55/160 (34%), Gaps = 28/160 (17%)

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              AS+SPD   +   S   G   + +  ++G    R+    E + F   +SP G  IA  
Sbjct: 975  WDASFSPDGRWVASGS---GDGTVRLWSADGLGAPRVLHPHEETIFAVEFSPDGKRIATG 1031

Query: 365  KF------------------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--L 404
                                 G    +  +  D S  R+   D +     WS  GR   +
Sbjct: 1032 SRDGTVRLTSLEDGMPPVVLDGRGRGVMSVAFDRSGTRIASADVDGVIRVWSADGREPPV 1091

Query: 405  IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            +  R  DG   S  +S D +     L++  A A+   W  
Sbjct: 1092 M-LRGHDGVILSIAFSPDGS----RLVSAGADATARVWGA 1126



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 30/173 (17%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++        V  R+WD  D             A  R   HT +  +Y       G  
Sbjct: 1402 GSLLATAAGDGVV--RVWDASDG---------GIAAVLR--GHTAA--VYGVAFRPDG-- 1444

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                      + S     ++ V + DG+    +    +  +    +SP+  ++  ++ D 
Sbjct: 1445 --------RQIASASADGTVRVWNTDGSGESRVFRGHEDTVTWVDYSPDGTRLVSSSNDK 1496

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                 V +  T  +  P  +      +   RFS +G   + S   D  + I+ 
Sbjct: 1497 ----TVRIWPTLGEGEPVVLRGHEQWVNKARFSPDGASIV-SASDDRTIRIWR 1544


>gi|254525121|ref|ZP_05137176.1| putative regulatory protein [Stenotrophomonas sp. SKA14]
 gi|219722712|gb|EED41237.1| putative regulatory protein [Stenotrophomonas sp. SKA14]
          Length = 775

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 100/276 (36%), Gaps = 19/276 (6%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-- 234
           I F   S   G     + +    G  +R  T      L    ++P+ + + + +      
Sbjct: 284 IAFARFSAEGG---CQVLIASATGGALRQATRCDGTELLSFDWTPDGRGLVFGSMVGRYA 340

Query: 235 -DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +RV  + +    A     +      APR+S +GK  +  V+  +  D++ +      
Sbjct: 341 HRGIRVLDLASGQWNAVDYSVDADDFDYAPRYSPDGKWLVF-VRNPQMGDLWRMPASGGV 399

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            E+LTN        ++  D   IVF    + + +LY +     +++ +          P 
Sbjct: 400 PEQLTNEAAEQRGWAWVDDGRTIVFGRRVDSEVRLYYLDV---ERRTLRDAGLDDAQWPA 456

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG 412
            S  G ++AF      +F +  +  DG   + L         P  +P GR L+F+  + G
Sbjct: 457 VSRHGGVLAFVHRR-AQFGVFKVPTDGGSAQRLFASSGRDGQPMAAPDGRQLVFTSDRSG 515

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASD----PQWVG 444
                L+  D+  R ++L        +    P W  
Sbjct: 516 SFA--LWWADMQ-RPDSLRPIEGLRPEGRQAPDWSA 548



 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 45/324 (13%), Positives = 101/324 (31%), Gaps = 20/324 (6%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
             D   + F  +  +   Q++           R+   T  D           D    ++F
Sbjct: 278 SPDGREIAFARFSAEGGCQVLIASATGGA--LRQA--TRCDGTELLSFDWTPDGRG-LVF 332

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            S           +  +     N    +   D   + PR+SP+ + + +        +  
Sbjct: 333 GSMVGRYAHRGIRVLDLASGQWNAVDYSVDADDFDYAPRYSPDGKWLVFV---RNPQMGD 389

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                     P+++ N  +      +  +G+  +   + D  + +Y +D++         
Sbjct: 390 LWRMPASGGVPEQLTNEAAEQRGWAWVDDGRTIVFGRRVDSEVRLYYLDVERRTLR---- 445

Query: 300 TLFINIS--ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              ++ +   + S     + F   R  +  ++ + ++G   +R+          P+ +P 
Sbjct: 446 DAGLDDAQWPAVSRHGGVLAFV-HRRAQFGVFKVPTDGGSAQRL-FASSGRDGQPMAAPD 503

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDT 414
           G  + FT      FA+             +E    +   AP WS   R L+    +D   
Sbjct: 504 GRQLVFTSDRSGSFALWWADMQRPDSLRPIEGLRPEGRQAPDWSADSRHLL-VVGRDEHG 562

Query: 415 GSKLYSIDLNGRNETLINTPAYAS 438
            + +Y I         +  PA   
Sbjct: 563 RTVIYEISPRDERLQALPVPAEQP 586



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 67/169 (39%), Gaps = 17/169 (10%)

Query: 295 ERLTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKR-ISQDKEASYF 350
             +T T       + SPD SQ+ +E    D +G   + V  S  +  ++ ++    AS  
Sbjct: 214 RLITATSGFETYPTLSPDGSQVAYEGANEDGKGGGAIKVQTSGNAPARQLLAPPVGASDR 273

Query: 351 DPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFS 407
            P WSP G  IAF +FS      + +    G   R     + + L +  W+P GR L+F 
Sbjct: 274 FPSWSPDGREIAFARFSAEGGCQVLIASATGGALRQATRCDGTELLSFDWTPDGRGLVFG 333

Query: 408 RKKDGDTGSKLYSIDLNGRNETLIN----------TPAYASDPQWVGFM 446
                     +  +DL       ++           P Y+ D +W+ F+
Sbjct: 334 SMVGRYAHRGIRVLDLASGQWNAVDYSVDADDFDYAPRYSPDGKWLVFV 382



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 77/280 (27%), Gaps = 61/280 (21%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  M   G     LT    +      +  + + + +    D ++   YL         +
Sbjct: 389 DLWRMPASGGVPEQLTNEAAEQRGW-AWVDDGRTIVFGRRVDSEVRLYYL------DVER 441

Query: 252 RIGNFRSMILA--PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           R      +  A  P  S +G       ++ +   ++ V     + +RL  +   +     
Sbjct: 442 RTLRDAGLDDAQWPAVSRHGGVLAFVHRRAQFG-VFKVPTDGGSAQRLFASSGRDGQPMA 500

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFS- 367
           +PD  Q+VF SDR G   L+       D  R I   +      P WS     +       
Sbjct: 501 APDGRQLVFTSDRSGSFALWWADMQRPDSLRPIEGLRPEGRQAPDWSADSRHLLVVGRDE 560

Query: 368 ---------------------------------------------GEKFAIGVMKKDGSQ 382
                                                         ++  + +  +    
Sbjct: 561 HGRTVIYEISPRDERLQALPVPAEQPLQALYGATEDQLLVVERDADQRTRLSLFDRSTQP 620

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            R L     +    +      ++F+R   G     L+S+D
Sbjct: 621 WRRLASIDGVSQARFDRGSGRVLFTRLAAGG----LWSVD 656



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 9/110 (8%)

Query: 331 MQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAF---TKFSGEKFAIGVMKKDGSQERL 385
           ++  GS Q+  R+          P  SP G  +A+    +      AI V     +  R 
Sbjct: 203 VRVIGSPQRPYRLITATSGFETYPTLSPDGSQVAYEGANEDGKGGGAIKVQTSGNAPARQ 262

Query: 386 LVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           L+     ++ + P+WSP GR + F+R    + G ++      G       
Sbjct: 263 LLAPPVGASDRFPSWSPDGREIAFARF-SAEGGCQVLIASATGGALRQAT 311


>gi|265752680|ref|ZP_06088249.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263235866|gb|EEZ21361.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 1084

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 107/270 (39%), Gaps = 33/270 (12%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V +     +R+L+   +  L    ++ + +   Y     +   +V +  TR D+     
Sbjct: 256 TVTNFKTHPVRFLSMGSNGTLC---YTYDGE--IYTQKQGDKPQKVKIDITRDDQNTIAD 310

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            NF +   +   S +GK+    V+     +++      N T+++T+T       ++SPD+
Sbjct: 311 LNFSNGATSATVSPDGKQIAFIVRG----EVFVTSADYNTTKQITHTPAREAGLTFSPDN 366

Query: 314 SQIVFESDREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             + + S+R G  +LY+             +   +++ +    +     P +SP G  +A
Sbjct: 367 RTLAYASERNGNWELYMAKIARKEEANFPNATTIEEEVLLPSDKTERTYPQFSPDGKELA 426

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFSRKKDGDT 414
           F +       + V+  +  + R + + +   +       +WSP G+   L F   +  D 
Sbjct: 427 FIEDRN---RLMVLNLETKKVRQVTDGATWFSTGGGFDYSWSPDGKWFTLEFIGNRH-DP 482

Query: 415 GSKLYSIDLNGRNETLINTPAY-ASDPQWV 443
            S +  ++  G     +    Y +  P+WV
Sbjct: 483 YSDIGMVNAQGGKIINLTNSGYTSGSPRWV 512



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A+    +        + +      K+I +  +      FS + +    + +
Sbjct: 321 TVSPDGKQIAFIVRGE------VFVTSADYNTTKQITHTPAREAGLTFSPDNRTLAYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN------------ISASYSPDSSQIVFESDREGK 325
           ++   ++Y   +         N   I                 +SPD  ++ F  DR   
Sbjct: 375 RNGNWELYMAKIARKEEANFPNATTIEEEVLLPSDKTERTYPQFSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  IG++  
Sbjct: 432 NRLMVLNLETKKVRQVTDGATWFSTGGGFDYSWSPDGKWFTLEFIGNRHDPYSDIGMVNA 491

Query: 379 DGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG 412
            G +   L        +P W   G +++F  ++ G
Sbjct: 492 QGGKIINLTNSGYTSGSPRWVLDGNAILFITERYG 526



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 72/201 (35%), Gaps = 28/201 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G       + D    IY V        +LT       +  +SPDS QI F SDR G 
Sbjct: 31  SPDGTEIAFCYKGD----IYKVPSNGGTATQLTTQASYECNPIWSPDSKQIAFASDRNGN 86

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----------IG 374
             L+VM ++G   +R++    AS     ++  G+ I F+    +              + 
Sbjct: 87  FDLFVMSADGGAARRLTT-HSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTELY 145

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSIDL- 423
            +   G +   ++     +   +  SG++ ++  +K                 ++  +  
Sbjct: 146 KVPVTGGRTEQVLGTP-AEMVCFDKSGKTFLYQDRKGFEDEWRKHHTSSITRDVWLYNSE 204

Query: 424 NGRNETLINTPAYASDPQWVG 444
           NG++  L        +P +  
Sbjct: 205 NGKHTNLTAHAGEDRNPVFAP 225



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 80/230 (34%), Gaps = 34/230 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S    P +S + K+   +  +
Sbjct: 30  ISPDGTEIAFCY--KGDIYKV----PSNGGTATQLTTQASYECNPIWSPDSKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
           +   D++ +     A  RLT      I ++++ D + I+F +                 +
Sbjct: 84  NGNFDLFVMSADGGAARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTE 143

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +   G   +++     A       S  G    +               S     + +
Sbjct: 144 LYKVPVTGGRTEQVL-GTPAEMVCFDKS--GKTFLYQDRKGFEDEWRKHHTSSITRDVWL 200

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +  +   L       + P ++P G+++ F  +++G T   +YS  ++
Sbjct: 201 YNSENGKHTNLTAHAGEDRNPVFAPDGQTVYFLSERNGGT-FNVYSFPIS 249



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 88/254 (34%), Gaps = 32/254 (12%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +  +G     LT         P +SP+ +++A+A+  + +     +  +    
Sbjct: 41  YKGDIYKVPSNGGTATQLTTQAS-YECNPIWSPDSKQIAFASDRNGNFDLFVM--SADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATERL 297
           A +R+    +  +   F+++G   L S    +             ++Y V +    TE++
Sbjct: 98  AARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTELYKVPVTGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  S       ++  
Sbjct: 158 LGTPAEMV--CFDKSGKTFLYQ-DRKGFEDEWRKHHTSSITRDVWLYNSENGKHTNLT-A 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                 +PV++P G  + F ++ +G  F +        Q    V +       +   G +
Sbjct: 214 HAGEDRNPVFAPDGQTVYFLSERNGGTFNVYSFPISSPQSLETVTNFKTHPVRFLSMGSN 273

Query: 404 LIFSRKKDGDTGSK 417
                  DG+  ++
Sbjct: 274 GTLCYTYDGEIYTQ 287



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
            SP G  IAF         I  +  +G     L   ++ +  P WSP  + + F+  ++G
Sbjct: 30  ISPDGTEIAFCYKGD----IYKVPSNGGTATQLTTQASYECNPIWSPDSKQIAFASDRNG 85

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +    L+ +  +G     + T + +  P 
Sbjct: 86  NF--DLFVMSADGGAARRLTTHSASEIPS 112



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 59/367 (16%), Positives = 126/367 (34%), Gaps = 57/367 (15%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEK 170
             V  +GK     V   ++ V        K+   +PA  R+   T S D       +   
Sbjct: 320 ATVSPDGKQIAFIVRGEVF-VTSADYNTTKQITHTPA--REAGLTFSPDNRTLAYASERN 376

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G++   +  ++    +     +             L PS       P+FSP+ +++A+  
Sbjct: 377 GNWELYMAKIARKEEANFPNATTI-------EEEVLLPSDKTERTYPQFSPDGKELAFI- 428

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNF-----RSMILAPRFSSNGKRA---LISVQKDEAM 282
              ED  R+ +++    +  +++ +              +S +GK      I  + D   
Sbjct: 429 ---EDRNRLMVLNLET-KKVRQVTDGATWFSTGGGFDYSWSPDGKWFTLEFIGNRHDPYS 484

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----------QLYVM 331
           DI  V+ Q      LTN+ + + S  +  D + I+F ++R G              L  M
Sbjct: 485 DIGMVNAQGGKIINLTNSGYTSGSPRWVLDGNAILFITERYGMRAHASWGSLNDVMLVFM 544

Query: 332 QSNGSDQKRISQDKE----------------ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             +  D+ R+S++                            +       +   +   + +
Sbjct: 545 NQDAYDKFRLSKEDYELQKELEKEQKNTTETKKNGKKKGDNKEKSEEKKEEKVKDIVVEL 604

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--T 433
              +    RL    S+L +   +  G +L +    +G  G  L+ ++L  ++  L++   
Sbjct: 605 NNIEDRIVRLTPNSSDLGSAIITKDGETLYYLSAFEG--GYDLWKMNLRKKDTKLLHKMD 662

Query: 434 PAYASDP 440
             +A+  
Sbjct: 663 AGWANMG 669


>gi|89071212|ref|ZP_01158398.1| hypothetical protein OG2516_13911 [Oceanicola granulosus HTCC2516]
 gi|89043254|gb|EAR49482.1| hypothetical protein OG2516_13911 [Oceanicola granulosus HTCC2516]
          Length = 272

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 76/205 (37%), Gaps = 16/205 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  ++A + +       VY +        +      S      +S +G   + +  +D
Sbjct: 71  SPDGTRLAISDHSQHGKSSVYTLPVSGGTPVEVTPRQPSWWHG--WSPDGGAIVYAAARD 128

Query: 280 EAMDI-YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                 Y   L+      L           +S D + + F  +R+G   L+ ++ +G D 
Sbjct: 129 GGPVAPYIAPLEGGEELCLATGFDHCDGPDFSADGAWVWFNGERDGSVDLWRVRPDGRDL 188

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFT--------KFSGEKFAIGVMKKDGSQERLLVE-- 388
           +R++      +F P  SP G  + +            G   A+ +M +DG   R LV   
Sbjct: 189 QRMTDGDSVDWF-PHPSPDGAHVVWLAYPPGTQGHPGGLDVALWLMPQDGGAGRELVRLH 247

Query: 389 --DSNLQAPTWSPSGRSLIFSRKKD 411
                +  P+W+P GR   F R  D
Sbjct: 248 GGQGTINVPSWAPDGRRFAFVRYAD 272



 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 81/199 (40%), Gaps = 13/199 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           ++ S  S   K+S+  +   G     +TP   Q  +   +SP+   + YA   D   +  
Sbjct: 77  LAISDHSQHGKSSVYTLPVSGGTPVEVTPR--QPSWWHGWSPDGGAIVYAAARDGGPVAP 134

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y+              F      P FS++G     + ++D ++D++ V       +R+T+
Sbjct: 135 YIAPLEGGEELCLATGFD-HCDGPDFSADGAWVWFNGERDGSVDLWRVRPDGRDLQRMTD 193

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQ--------LYVMQSNGSDQKRISQ--DKEASY 349
              ++     SPD + +V+ +   G +         L++M  +G   + + +    + + 
Sbjct: 194 GDSVDWFPHPSPDGAHVVWLAYPPGTQGHPGGLDVALWLMPQDGGAGRELVRLHGGQGTI 253

Query: 350 FDPVWSPQGDLIAFTKFSG 368
             P W+P G   AF +++ 
Sbjct: 254 NVPSWAPDGRRFAFVRYAD 272



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 99/276 (35%), Gaps = 28/276 (10%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K+ +C+   D  +   +  + D  +  P + P+   +      D  + RV L    ++  
Sbjct: 2   KSEICIAGLD--SSVTVVLAHDGHVEAPNWHPDGYLIV---NGDGRLFRVDLDAPSLEAI 56

Query: 250 PKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                   +       S +G R  IS   +     +Y++ +       +T     +    
Sbjct: 57  DTGFATRCNNDHG--LSPDGTRLAISDHSQHGKSSVYTLPVSGGTPVEVT-PRQPSWWHG 113

Query: 309 YSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +SPD   IV+ + R+G     Y+    G ++  ++   +     P +S  G  + F    
Sbjct: 114 WSPDGGAIVYAAARDGGPVAPYIAPLEGGEELCLATGFDHCD-GPDFSADGAWVWFNGER 172

Query: 368 GEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGS------KLYS 420
                +  ++ DG   + + + DS    P  SP G  +++     G  G        L+ 
Sbjct: 173 DGSVDLWRVRPDGRDLQRMTDGDSVDWFPHPSPDGAHVVWLAYPPGTQGHPGGLDVALWL 232

Query: 421 IDLNG----------RNETLINTPAYASDPQWVGFM 446
           +  +G            +  IN P++A D +   F+
Sbjct: 233 MPQDGGAGRELVRLHGGQGTINVPSWAPDGRRFAFV 268


>gi|297183395|gb|ADI19529.1| dipeptidyl aminopeptidases/acylaminoacyl-peptidases [uncultured
           Chloroflexi bacterium HF0770_09E03]
          Length = 462

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 57/303 (18%), Positives = 110/303 (36%), Gaps = 64/303 (21%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+   ++SL +M+ DG   R+L          P++SP+  ++A+         ++++   
Sbjct: 64  VNDNWESSLWIMNVDGKKNRFLVDGSS-----PKWSPDGTRIAFLASGKPGGTQLFVRWM 118

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISV---------------------------- 276
             + A  +I           +S +G      +                            
Sbjct: 119 DAEGAVSQISRVTDSPSNITWSPDGTSIAFQMVVPPDDGELWDINMPPKPNEADWTGNPT 178

Query: 277 -------QKD-------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
                  ++D           I+ +        RLT+  + + S  + PD   I+FES R
Sbjct: 179 IIERLNYRRDRVGYHPKGYRHIFIIPADGGTPHRLTHGDWHHDSYEWMPDGKAIIFESLR 238

Query: 323 -------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKF-- 371
                    + ++Y +  N  + +++S+ K      PV SP G  IA+T   +S + +  
Sbjct: 239 VEDAEYQWRESEIYSVDVNSGEIRQLSKRK-GPDRGPVPSPDGRYIAYTGHDWSDDTYIE 297

Query: 372 -AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             +  MK DGS+   +           TWS  G  + ++   +G   S LY   L+G+  
Sbjct: 298 EGLYFMKADGSKPERIAGEMGRRPGNLTWSEDGSGVYYNAAMEGT--SNLYFAPLSGKPR 355

Query: 429 TLI 431
            + 
Sbjct: 356 PVT 358



 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 86/272 (31%), Gaps = 62/272 (22%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQK 278
           SP+ Q++ Y     + +   +     I     +   F     +P++S +G R    +  K
Sbjct: 48  SPDGQQIIYTRRWVDAVNDNWESSLWIMNVDGKKNRFLVDGSSPKWSPDGTRIAFLASGK 107

Query: 279 DEAMDIYS--VDLQS--NATERLTNTLFINISASYSPDSSQIVFE--------------- 319
                ++   +D +   +   R+T++        +SPD + I F+               
Sbjct: 108 PGGTQLFVRWMDAEGAVSQISRVTDSPSNIT---WSPDGTSIAFQMVVPPDDGELWDINM 164

Query: 320 ------SDREGKE---------------------QLYVMQSNGSDQKRISQDKEASYFDP 352
                 +D  G                        ++++ ++G    R++   +  +   
Sbjct: 165 PPKPNEADWTGNPTIIERLNYRRDRVGYHPKGYRHIFIIPADGGTPHRLTH-GDWHHDSY 223

Query: 353 VWSPQGDLIAFTKFSGEK-------FAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSL 404
            W P G  I F     E          I  +  +  + R L +     + P  SP GR +
Sbjct: 224 EWMPDGKAIIFESLRVEDAEYQWRESEIYSVDVNSGEIRQLSKRKGPDRGPVPSPDGRYI 283

Query: 405 IFSRKKDGDTGS---KLYSIDLNGRNETLINT 433
            ++     D       LY +  +G     I  
Sbjct: 284 AYTGHDWSDDTYIEEGLYFMKADGSKPERIAG 315



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 90/272 (33%), Gaps = 60/272 (22%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIR--YLTPSRDQILFEPRFSPNQQKVAYATY- 231
           +RI F++     G        MD +GA  +   +T S   I     +SP+   +A+    
Sbjct: 98  TRIAFLASGKPGGTQLFVRW-MDAEGAVSQISRVTDSPSNI----TWSPDGTSIAFQMVV 152

Query: 232 ---------------------------------------DDEDILRVYLMDTRIDRAPKR 252
                                                        R   +       P R
Sbjct: 153 PPDDGELWDINMPPKPNEADWTGNPTIIERLNYRRDRVGYHPKGYRHIFIIPADGGTPHR 212

Query: 253 IGNFRSMILAPRFSSNGKRALI-SVQKDEA------MDIYSVDLQSNATERLTNTLFINI 305
           + +      +  +  +GK  +  S++ ++A       +IYSVD+ S    +L+     + 
Sbjct: 213 LTHGDWHHDSYEWMPDGKAIIFESLRVEDAEYQWRESEIYSVDVNSGEIRQLSKRKGPDR 272

Query: 306 SASYSPDSSQIVFE----SDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               SPD   I +     SD    +E LY M+++GS  +RI+ +      +  WS  G  
Sbjct: 273 GPVPSPDGRYIAYTGHDWSDDTYIEEGLYFMKADGSKPERIAGEMGRRPGNLTWSEDGSG 332

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           + +         +      G + R + +  ++
Sbjct: 333 VYYNAAMEGTSNLYFAPLSG-KPRPVTKGKHM 363


>gi|307331447|ref|ZP_07610564.1| amidohydrolase [Streptomyces violaceusniger Tu 4113]
 gi|306882890|gb|EFN13959.1| amidohydrolase [Streptomyces violaceusniger Tu 4113]
          Length = 1099

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 63/300 (21%), Positives = 104/300 (34%), Gaps = 44/300 (14%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           +  KG     I F S ++     +  +   D D   +R +     + L  P  SP+ +KV
Sbjct: 338 SDRKGVAYEEIPF-SATLPIDRPRYRVKRYDFDSGGVRPV-----RGLHLPALSPDGRKV 391

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           A+A  +      +++ D    RAP+R+        +LAP ++ +G+  + +  +D  +  
Sbjct: 392 AFAALN-----SLWVADVSGGRAPRRVVRAAPTRYLLAPTWTPDGRALVYADDRDGLLAA 446

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
              DL S     L       +  + SPD  +I    D  G   L  + +           
Sbjct: 447 RRRDLASGEETVL--ASGGRVHPALSPDGKRIA-CVDMSGNLVLRDLDAGTERVLAAPMG 503

Query: 345 KEASYFDPVWSPQGDLIAFT-------KFSGEKFAIGVMKKDGSQERL-------LVEDS 390
                  P WSP G  +A         +F      I V+  D    R         + D 
Sbjct: 504 AGGLPGRPSWSPDGRYVALCDRNRLNQRFREGYNLIRVIDTDTGTARQHAVAPHTSLSDR 563

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL------NGRNETLINTPAYASDPQWVG 444
               P WSP GR +           S L+ + +      +G    L +  A    P W G
Sbjct: 564 YDSGPVWSPDGRHMALI------VESALWLLPVRADGTPDGAPRRLTDEAAD--HPSWSG 615



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 89/249 (35%), Gaps = 35/249 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  ++        ++  V     R       +         P +S +GK   +   + 
Sbjct: 67  SPSGDRMI------AEVQNVLWSVARKGGEAVPLTPADLEPTRPVYSPDGKLLAVCAYRG 120

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------QLYVMQS 333
               I+++    +   + T+  + +   ++SPD ++I F S+R G        +++V++ 
Sbjct: 121 GGFHIWTLRPDGSGLRQRTDGPWDDRGPAWSPDGTRIAFASERGGDPVAGSPYRIWVLEV 180

Query: 334 NGSDQKRIS---------QDKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKD 379
              +  R++         QD     FDP WS  G+ + F +      +     +  ++ D
Sbjct: 181 ATGELTRLTGADGQDGPLQDGAWEDFDPTWSADGERVLFVRGALAGTTLNARTVASVRAD 240

Query: 380 GSQERL-----LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           G+             + +  P+ S  G  L + R       S   ++ + G    +    
Sbjct: 241 GTGPVTAEHTDPTAGAQVMTPSVSADG-HLAYLRTTAAPAAS--CTLVVAGEPVAITGDV 297

Query: 435 AYASDPQWV 443
                P+WV
Sbjct: 298 QPVP-PRWV 305



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 56/286 (19%), Positives = 102/286 (35%), Gaps = 40/286 (13%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANI--RYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           L      V+    NSL V D  G     R +  +  + L  P ++P+ + + YA  DD D
Sbjct: 384 LSPDGRKVAFAALNSLWVADVSGGRAPRRVVRAAPTRYLLAPTWTPDGRALVYA--DDRD 441

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            L               + +     + P  S +GKR       D + ++   DL +    
Sbjct: 442 GLLAARRRDLASGEETVLAS--GGRVHPALSPDGKRIACV---DMSGNLVLRDLDAGTER 496

Query: 296 RLTNTLF---INISASYSPDSSQIVFE-------SDREGKEQLYVMQSNGSDQKRI---- 341
            L   +    +    S+SPD   +            REG   + V+ ++    ++     
Sbjct: 497 VLAAPMGAGGLPGRPSWSPDGRYVALCDRNRLNQRFREGYNLIRVIDTDTGTARQHAVAP 556

Query: 342 -SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV--MKKDG---SQERLLVEDSNLQAP 395
            +   +     PVWSP G  +A    S    A+ +  ++ DG      R L +++    P
Sbjct: 557 HTSLSDRYDSGPVWSPDGRHMALIVES----ALWLLPVRADGTPDGAPRRLTDEAAD-HP 611

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +WS   R +++          +L  +D+       +  P     P+
Sbjct: 612 SWSGDSRHVLYLS------AGRLRLLDVERGTARTVRVPLDHRRPR 651



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 97/318 (30%), Gaps = 79/318 (24%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-----ILRVYLMDTRID 247
           +  +  DG+ +R  T         P +SP+  ++A+A+    D       R+++++    
Sbjct: 125 IWTLRPDGSGLRQRTDG-PWDDRGPAWSPDGTRIAFASERGGDPVAGSPYRIWVLEVATG 183

Query: 248 RAPKRIGNFRSM---------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-- 296
              +  G                 P +S++G+R L       A+   +++ ++ A+ R  
Sbjct: 184 ELTRLTGADGQDGPLQDGAWEDFDPTWSADGERVLFVR---GALAGTTLNARTVASVRAD 240

Query: 297 ----LT------NTLFINISASYSPDSSQIVFESDR----------EGKEQLYVMQSNGS 336
               +T            ++ S S D       +             G+           
Sbjct: 241 GTGPVTAEHTDPTAGAQVMTPSVSADGHLAYLRTTAAPAASCTLVVAGEPVAITGDVQPV 300

Query: 337 DQKRISQDK-----EASYFDPVWSP-------------QGDLIAFTK--------FSGEK 370
             + +S+D+        +     SP                 +A+ +            +
Sbjct: 301 PPRWVSRDELLLTVNGRFRVFRMSPAVRSGAAGSDEKSDRKGVAYEEIPFSATLPIDRPR 360

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNET 429
           + +     D    R +     L  P  SP GR + F+        + L+  D++ GR   
Sbjct: 361 YRVKRYDFDSGGVRPV---RGLHLPALSPDGRKVAFAA------LNSLWVADVSGGRAPR 411

Query: 430 LINTPAYAS---DPQWVG 444
            +   A       P W  
Sbjct: 412 RVVRAAPTRYLLAPTWTP 429


>gi|119505342|ref|ZP_01627416.1| acylaminoacyl-peptidase [marine gamma proteobacterium HTCC2080]
 gi|119458797|gb|EAW39898.1| acylaminoacyl-peptidase [marine gamma proteobacterium HTCC2080]
          Length = 698

 Score =  117 bits (294), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 97/291 (33%), Gaps = 57/291 (19%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
               +  L +++ DG N R LT S +     P++SP+ Q++AY     ++   +Y+    
Sbjct: 73  KDKRRGDLWLVNTDGENHRKLT-SFEGNETSPQWSPDGQRIAYVRRAGKEGAEIYV-HWL 130

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--------------------------- 278
           +     RI          R+S +G     ++                             
Sbjct: 131 VSGHSARITRVEGSPSHLRWSPSGAHIAFAMTAKSPPPVLAKRPSAPEGAKWADKPRVTD 190

Query: 279 -------------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-- 323
                             +Y +        +L++  F + S  +  D   +V   +R   
Sbjct: 191 RLYHERDGSGYVEPGFSHVYVIPADGGTPRQLSDGNFHHRSPEWRSDGQALVVTGNRSED 250

Query: 324 -----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-----FAI 373
                   ++Y +     + + ++         P+ SP G  +A+  F+ ++       +
Sbjct: 251 WQYDFRNSEVYTIDLGSGNIQSLTSIS-GPDDSPLPSPDGQWVAWLGFTDKRQAYQVSRL 309

Query: 374 GVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            V + DGS  R  L+  D ++ A  W+     + +     G T     +ID
Sbjct: 310 RVAEPDGSNVRELLVSLDRSVDAIQWAADAAGIYYQYDDRGRTKIGYVTID 360



 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 103/263 (39%), Gaps = 38/263 (14%)

Query: 212 QILFEPRFSPNQQKVAYATYD---DEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSS 267
           +   +P+ SP+ ++V Y        +D  R  L     D    +++ +F     +P++S 
Sbjct: 48  EWASDPQISPDGRQVVYRRMGFDMMKDKRRGDLWLVNTDGENHRKLTSFEGNETSPQWSP 107

Query: 268 NGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +G+R     +   E  +IY   L S  + R+T          +SP  + I F    +   
Sbjct: 108 DGQRIAYVRRAGKEGAEIYVHWLVSGHSARITRVEGSPSHLRWSPSGAHIAFAMTAKSPP 167

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDG 380
            +          KR S  + A + D    P+     + +  G  +       + V+  DG
Sbjct: 168 PVL--------AKRPSAPEGAKWADK---PRVTDRLYHERDGSGYVEPGFSHVYVIPADG 216

Query: 381 SQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDT-----GSKLYSIDL-NGRNETLINT 433
              R L +   + ++P W   G++L+ +  +  D       S++Y+IDL +G  ++L + 
Sbjct: 217 GTPRQLSDGNFHHRSPEWRSDGQALVVTGNRSEDWQYDFRNSEVYTIDLGSGNIQSLTSI 276

Query: 434 PAYASDP---------QWVGFMD 447
                 P          W+GF D
Sbjct: 277 SGPDDSPLPSPDGQWVAWLGFTD 299


>gi|228470863|ref|ZP_04055710.1| MdsD protein [Porphyromonas uenonis 60-3]
 gi|228307430|gb|EEK16440.1| MdsD protein [Porphyromonas uenonis 60-3]
          Length = 1097

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 76/211 (36%), Gaps = 33/211 (15%)

Query: 262 APRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            PR+      S +G +     Q D    IY VD        LT +       ++SPD  +
Sbjct: 30  TPRWLRYAQISPDGNQIAFCYQGD----IYIVDAIGGEARLLTGSDGYESHPTWSPDGKR 85

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           I F S+R+G   +Y M + G D KRI+     S+    ++P G  I  +           
Sbjct: 86  IAFMSNRDGHRSIYTMSALGGDVKRITHHSGNSHTVECYTPDGRFIIMSEALQQPATSAL 145

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG-RSLI---------FSRKKDGDT 414
             SG    + ++  DG    +L     L+A T+S  G R +          + +      
Sbjct: 146 NPSGILSQLYMIPVDGGTP-MLYNARPLEAVTFSHRGDRYVAQDIKGFENKWRKHHTSSV 204

Query: 415 GSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
              +Y +D  +G        P     P +  
Sbjct: 205 TRDIYIVDPKSGVTTACTLEPGEDLSPVFGP 235



 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 107/303 (35%), Gaps = 38/303 (12%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           + ++   G  +  + F+SE   S  +   +          + +T  R+  +     S + 
Sbjct: 227 EDLSPVFGPDDQTVYFLSERGKSNSLN--VWKQRIGEQTAQQVTSFRNHPVRFLSISRSG 284

Query: 224 Q-KVAY----ATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +   AY     T  +    +   +  R     D+  +R  +       P  SS+GK+   
Sbjct: 285 RLCFAYDGDLYTMTEGRSPQKVQITLRSEGPKDKVYRRTASSGGSSFTP--SSDGKQLAF 342

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            ++ D    +Y   ++   T+R+T +     S ++SPDS  +V++S R+GK  LY     
Sbjct: 343 IMRGD----VYVTSVEHGTTKRITQSSGAEESVTWSPDSKTLVYDSRRDGKHILYKATIA 398

Query: 335 GS-----------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                         ++ +  + +     P +SP G  IAF    G++  I        + 
Sbjct: 399 SDKELDFASATIIKEEPLMPECKMEQALPQYSPDGKQIAFV---GDRKCIYTYDIASKKL 455

Query: 384 RLLVEDSN------LQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAY 436
             +    +        +  WSP  R + F    +       +  +   G     +    Y
Sbjct: 456 TQVTSGKDQPEMHGYISFEWSPDSRWIAFEYTPNRHAPFGDVGLVRATGGEVINLTNTGY 515

Query: 437 ASD 439
            S+
Sbjct: 516 FSN 518



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 79/236 (33%), Gaps = 44/236 (18%)

Query: 217 PRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           PR+      SP+  ++A+    D     +Y++D  I    + +         P +S +GK
Sbjct: 31  PRWLRYAQISPDGNQIAFCYQGD-----IYIVD-AIGGEARLLTGSDGYESHPTWSPDGK 84

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVF--------ES- 320
           R      +D    IY++       +R+T+     +    Y+PD   I+          S 
Sbjct: 85  RIAFMSNRDGHRSIYTMSALGGDVKRITHHSGNSHTVECYTPDGRFIIMSEALQQPATSA 144

Query: 321 -DREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------ 372
            +  G   QLY++  +G                  +S +GD   +     + F       
Sbjct: 145 LNPSGILSQLYMIPVDGGTP---MLYNARPLEAVTFSHRGDR--YVAQDIKGFENKWRKH 199

Query: 373 --------IGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                   I ++           +E     +P + P  +++ F  ++       ++
Sbjct: 200 HTSSVTRDIYIVDPKSGVTTACTLEPGEDLSPVFGPDDQTVYFLSERGKSNSLNVW 255



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 47/343 (13%), Positives = 102/343 (29%), Gaps = 121/343 (35%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  + ++D  G   R L    D     P +SP+ +++A+ +  D     +Y M + +  
Sbjct: 50  YQGDIYIVDAIGGEAR-LLTGSDGYESHPTWSPDGKRIAFMSNRDGH-RSIYTM-SALGG 106

Query: 249 APKRIGNFRSMILAP-RFSSNGKRALIS----------VQKDEAM-DIYSVDLQSNAT-- 294
             KRI +          ++ +G+  ++S          +     +  +Y + +       
Sbjct: 107 DVKRITHHSGNSHTVECYTPDGRFIIMSEALQQPATSALNPSGILSQLYMIPVDGGTPML 166

Query: 295 -----------------------------------ERLTNTLFI---------------- 303
                                                +T  ++I                
Sbjct: 167 YNARPLEAVTFSHRGDRYVAQDIKGFENKWRKHHTSSVTRDIYIVDPKSGVTTACTLEPG 226

Query: 304 -NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDL 360
            ++S  + PD   + F S+R     L V +    +Q  ++++  +         S  G L
Sbjct: 227 EDLSPVFGPDDQTVYFLSERGKSNSLNVWKQRIGEQTAQQVTSFRNHPVRFLSISRSGRL 286

Query: 361 ------------------------------------------IAFTKFSGEKFAIGVMKK 378
                                                      +FT  S  K    +M+ 
Sbjct: 287 CFAYDGDLYTMTEGRSPQKVQITLRSEGPKDKVYRRTASSGGSSFTPSSDGKQLAFIMRG 346

Query: 379 D--------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           D        G+ +R+       ++ TWSP  ++L++  ++DG 
Sbjct: 347 DVYVTSVEHGTTKRITQSSGAEESVTWSPDSKTLVYDSRRDGK 389



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
           ++Q+          SP G+ IAF         I ++   G + RLL   D     PTWSP
Sbjct: 26  VAQETPRWLRYAQISPDGNQIAFCYQGD----IYIVDAIGGEARLLTGSDGYESHPTWSP 81

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            G+ + F   +DG     +Y++   G +   I   +  S 
Sbjct: 82  DGKRIAFMSNRDGHR--SIYTMSALGGDVKRITHHSGNSH 119



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 67/237 (28%), Gaps = 18/237 (7%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
           KD+ ++ G   F      R IA   + + +           +    ++ +        + 
Sbjct: 462 KDQPEMHGYISFEWSPDSRWIAFEYTPNRHAPFGDVGLVRATGGEVINLTNTGYFSNLTG 521

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            VM   G N    T  R  +     +       A+  + +      + M         R 
Sbjct: 522 WVM---GGNAILFTSDRYGMRNHASW--GSMSDAFLVFLNRKAYEKFNMTPEERDLYDRA 576

Query: 254 GNFR---SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISAS 308
           G           P  ++  K+        +      V+++       RLT        A 
Sbjct: 577 GLDTLQYGSDPVPAENAKKKK--------DETKPIIVEVKGLEDRIVRLTPNSSDLADAY 628

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              D   + + S  EG   L+       +   + Q + +       +P+GD I    
Sbjct: 629 VDADGKNLYYLSAFEGGYNLWHTDLRKGNTSMLRQLELSGSAYMRPTPKGDKIFVVS 685


>gi|149193986|ref|ZP_01871084.1| translocation protein TolB precursor [Caminibacter mediatlanticus
           TB-2]
 gi|149135939|gb|EDM24417.1| translocation protein TolB precursor [Caminibacter mediatlanticus
           TB-2]
          Length = 383

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 120/304 (39%), Gaps = 22/304 (7%)

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           L VE++    KD   I+ K++ S+  A +  + H    DI +        F  R +  S 
Sbjct: 77  LTVEYQ----KDSNTILIKRYHSNTYAFFPFLVHRAVYDINEFFKLPSAKFLIRKVIYSL 132

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V     + ++ + D   +  R L      +   P+++ N+Q   Y T  +   + +Y  
Sbjct: 133 LVAP--KEANIYLADYTLSYKRRLLAG--GLNVFPKWADNKQTTIYFTRYERKPV-LYKF 187

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +    +  K + + + M++      N  + L+++  +   D+Y  DL +    ++TN   
Sbjct: 188 NIYTGKKEKILSS-QGMLIVSDVKDN--KLLLTLAPNGQPDVYLFDLNTKKLTKITNYQG 244

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I+++  +     +I+F SDR G   ++          R+    +       +     L+ 
Sbjct: 245 IDVNGKFW--GDKIIFVSDRYGNPYVFQKDLTTGAVSRVLYHGKNQVGVDTYMDN--LVI 300

Query: 363 FTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            T+     F    F + ++  +    + L  +     P +S  G S++F ++ +  +   
Sbjct: 301 STRETANAFKPNTFNLFLVNANDDSLKRLTMNGQNMFPNFSVDGNSIMFIKRVNFSSKIG 360

Query: 418 LYSI 421
           +  +
Sbjct: 361 IIRL 364


>gi|218441689|ref|YP_002380018.1| hypothetical protein PCC7424_4792 [Cyanothece sp. PCC 7424]
 gi|218174417|gb|ACK73150.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 1363

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 92/260 (35%), Gaps = 15/260 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + +             DQ +    FSPN + +A A+ D      + L + +
Sbjct: 762  SGSDDKTIKLWNVQTGQQIRTLRGHDQSVLSLSFSPNGKMIASASRDK----IIKLWNVQ 817

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
              +  + +      + +  FS +GK    S  +D+ + ++  ++Q+    R L       
Sbjct: 818  TGQPIRTLRGHDGYVYSVSFSPDGKMIA-SSSRDKTIKLW--NVQTGQQIRALRGHDGYV 874

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S S+SPD   +   S     + + +         R  +      +   +S  G  +A +
Sbjct: 875  YSVSFSPDGKTLASGSS---DKTIKLWNVQTGQPIRTLRGHNGYVYSLSFSLDGKRLA-S 930

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              + +   I  + K+            + + ++SP G++L        D   KL+ +   
Sbjct: 931  GSADKTIKIWNVSKETEILTFNGHRGYVYSVSYSPDGKTLASGSD---DKTIKLWDVITG 987

Query: 425  GRNETLINTPAYASDPQWVG 444
                TL   P Y     +  
Sbjct: 988  TEMLTLYGHPNYVRSVSYSP 1007



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 113/334 (33%), Gaps = 44/334 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD- 172
            G+ +  G D   +  +LWDV    +++    +  P   R ++++       S + +K   
Sbjct: 967  GKTLASGSDDKTI--KLWDVITGTEML--TLYGHPNYVRSVSYSPDGKTLASSSEDKTIK 1022

Query: 173  ------------FNSRILFV--------SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
                        F     +V         +++ SG    ++ + D             D 
Sbjct: 1023 LWDVSTQTEIRIFRGHSGYVYSISLSNDGKTLASGSGDKTIKLWDVSTGIEIRTLKGHDD 1082

Query: 213  ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             +    FSP+ + +A ++ D    L + L D    +  + +      + +  FS +GK  
Sbjct: 1083 YVRSVTFSPDGKTLASSSND----LTIKLWDVSTGKEIRTLKEHHGWVRSVSFSPDGKMI 1138

Query: 273  LISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S   D  + ++  D+++    R L        S S+SPD   I   SD      + + 
Sbjct: 1139 A-SGSDDLTIKLW--DVKTGKEIRTLNGHHDYVRSVSFSPDGKMIASSSD---DLTIKLW 1192

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--ED 389
                  + R          +  +SP G  +A          I +      +E   +   D
Sbjct: 1193 DVKTGKEIRTLNGHHDYVRNVRFSPDGKTLA---SGSNDLTIKLWDVKTGKEIYTLNGHD 1249

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              ++  +WS  G+ L        D   K++ +  
Sbjct: 1250 GYVRRVSWSKDGKRLA---SGSADKTIKIWDLST 1280



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/369 (14%), Positives = 118/369 (31%), Gaps = 45/369 (12%)

Query: 104  NSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKK------FFSSPA-S 150
               G    V   V      ++          +LW+V+  +QI   +      +  S +  
Sbjct: 824  TLRGHDGYVY-SVSFSPDGKMIASSSRDKTIKLWNVQTGQQIRALRGHDGYVYSVSFSPD 882

Query: 151  WRKIAHTISDDIY-----------QSITGEKGDFNS-RILFVSESVVSGIIKNSLCVMDR 198
             + +A   SD              +++ G  G   S       + + SG    ++ + + 
Sbjct: 883  GKTLASGSSDKTIKLWNVQTGQPIRTLRGHNGYVYSLSFSLDGKRLASGSADKTIKIWNV 942

Query: 199  DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
                           ++   +SP+ + +A  + D      + L D         +    +
Sbjct: 943  SKETEILTFNGHRGYVYSVSYSPDGKTLASGSDDK----TIKLWDVITGTEMLTLYGHPN 998

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIV 317
             + +  +S +GK    S  +D+ + ++  D+ +    R+         S S S D   + 
Sbjct: 999  YVRSVSYSPDGKTLA-SSSEDKTIKLW--DVSTQTEIRIFRGHSGYVYSISLSNDGKTLA 1055

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              S   G + + +   +   + R  +  +       +SP G  +A +        I +  
Sbjct: 1056 SGS---GDKTIKLWDVSTGIEIRTLKGHDDYVRSVTFSPDGKTLASSSND---LTIKLWD 1109

Query: 378  KDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                +E   +      +++ ++SP G+ +        D   KL+ +       TL     
Sbjct: 1110 VSTGKEIRTLKEHHGWVRSVSFSPDGKMIASGSD---DLTIKLWDVKTGKEIRTLNGHHD 1166

Query: 436  YASDPQWVG 444
            Y     +  
Sbjct: 1167 YVRSVSFSP 1175



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 86/246 (34%), Gaps = 19/246 (7%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             R      +  + +  FS + + +A  + D      + L + +  +  + +      +L
Sbjct: 736 RERNRLEGHNNYVTKVSFSSDGKMIASGSDDK----TIKLWNVQTGQQIRTLRGHDQSVL 791

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFES 320
           +  FS NGK    S  +D+ + ++  ++Q+    R L        S S+SPD   I   S
Sbjct: 792 SLSFSPNGKMIA-SASRDKIIKLW--NVQTGQPIRTLRGHDGYVYSVSFSPDGKMIA-SS 847

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            R+  + + +       Q R  +  +   +   +SP G  +A          I +     
Sbjct: 848 SRD--KTIKLWNVQTGQQIRALRGHDGYVYSVSFSPDGKTLASGSSDKT---IKLWNVQT 902

Query: 381 SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            Q    +   +  + + ++S  G+ L        D   K++++       T      Y  
Sbjct: 903 GQPIRTLRGHNGYVYSLSFSLDGKRLA---SGSADKTIKIWNVSKETEILTFNGHRGYVY 959

Query: 439 DPQWVG 444
              +  
Sbjct: 960 SVSYSP 965



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/310 (16%), Positives = 106/310 (34%), Gaps = 40/310 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ +  G     +  +LWDV    +I  +         R +  T S D            
Sbjct: 1051 GKTLASGSGDKTI--KLWDVSTGIEI--RTLKGHDDYVRSV--TFSPD------------ 1092

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    +++ S     ++ + D                +    FSP+ + +A  + D 
Sbjct: 1093 -------GKTLASSSNDLTIKLWDVSTGKEIRTLKEHHGWVRSVSFSPDGKMIASGSDD- 1144

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               L + L D +  +  + +      + +  FS +GK    S   D  + ++  D+++  
Sbjct: 1145 ---LTIKLWDVKTGKEIRTLNGHHDYVRSVSFSPDGKMIA-SSSDDLTIKLW--DVKTGK 1198

Query: 294  TER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              R L        +  +SPD   +   S+      + +       +       +      
Sbjct: 1199 EIRTLNGHHDYVRNVRFSPDGKTLASGSN---DLTIKLWDVKTGKEIYTLNGHDGYVRRV 1255

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             WS  G  +A +  + +   I  +        L   D ++++ T+SP G++LI       
Sbjct: 1256 SWSKDGKRLA-SGSADKTIKIWDLSTKTELFTLKGYDESVRSVTFSPDGKTLISGSD--- 1311

Query: 413  DTGSKLYSID 422
            D+  KL+ +D
Sbjct: 1312 DSTIKLWYLD 1321



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 76/204 (37%), Gaps = 13/204 (6%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           ++    ++    R   R+    + +    FSS+GK    S   D+ + ++  ++Q+    
Sbjct: 724 VINALQLNLAQRRERNRLEGHNNYVTKVSFSSDGKMIA-SGSDDKTIKLW--NVQTGQQI 780

Query: 296 R-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           R L       +S S+SP+   I   S     + + +         R  +  +   +   +
Sbjct: 781 RTLRGHDQSVLSLSFSPNGKMIASASR---DKIIKLWNVQTGQPIRTLRGHDGYVYSVSF 837

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGD 413
           SP G +IA +          V    G Q R L   D  + + ++SP G++L        D
Sbjct: 838 SPDGKMIASSSRDKTIKLWNVQ--TGQQIRALRGHDGYVYSVSFSPDGKTLA---SGSSD 892

Query: 414 TGSKLYSIDLNGRNETLINTPAYA 437
              KL+++       TL     Y 
Sbjct: 893 KTIKLWNVQTGQPIRTLRGHNGYV 916


>gi|149279157|ref|ZP_01885290.1| putative exported peptidase [Pedobacter sp. BAL39]
 gi|149230159|gb|EDM35545.1| putative exported peptidase [Pedobacter sp. BAL39]
          Length = 1080

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 87/248 (35%), Gaps = 34/248 (13%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +  P  SP+ + +A+    D     +YL+ +        +    +  + P +S +G
Sbjct: 22  NPLWMRYPAISPDGKNIAFGYKGD-----IYLV-SAAGGQATPLTINEAQDMMPVWSPDG 75

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-- 327
           K    +  +    D++S+ +      RLT     +    +SPD  +++F S R    Q  
Sbjct: 76  KTLAFASNRYGNFDVFSIPVAGGNPVRLTFNSANDYPYDFSPDGKEVIFGSARNSTAQNV 135

Query: 328 ----------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TK 365
                     LY ++ NGS    IS    A      ++  G  I F              
Sbjct: 136 RFASPRVFQNLYSVKLNGSRPHLISA---AGMEKAKFNQDGSQIVFEDRKGFEDAWRKHH 192

Query: 366 FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            S     I +M    +  R L   +   + P +S   +S+ +  +K G+      + D +
Sbjct: 193 TSSVTRDIWIMDVKKNTYRKLTSFEGEDREPLYSSDQQSIYYLSEKAGNQNLFKMAADGS 252

Query: 425 GRNETLIN 432
           G    L  
Sbjct: 253 GTALQLST 260



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 62/356 (17%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISD------------DIYQSITGEKGDFNSRILFVSE 182
           D  QI+ +       +WRK  H  S             + Y+ +T  +G+    +    +
Sbjct: 172 DGSQIVFEDRKGFEDAWRK--HHTSSVTRDIWIMDVKKNTYRKLTSFEGEDREPLYSSDQ 229

Query: 183 SV----VSGIIKNSLCVMDRDGAN------------IRYLTPSRDQILFEPRFSPNQQKV 226
                        +L  M  DG+             +R+L+ + D  L    FS N +  
Sbjct: 230 QSIYYLSEKAGNQNLFKMAADGSGTALQLSTFKDNPVRHLSRANDNTLC---FSQNGEIY 286

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +        L+V +++   D   K        +     S NGK            +I+ 
Sbjct: 287 TFMENGTPTKLKVSILNDGRDNIVKT-EPVNGNVTEFVLSPNGKEIAFV----NRGEIFV 341

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--- 343
             ++S  T+++T T     S  +SPDS  +++ ++R     +Y       D+        
Sbjct: 342 TGVESGQTKQITRTAAQERSVQWSPDSKSLIYATERNNSWDIYRSTIQQKDEPYFFAATV 401

Query: 344 -------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                     A  F P++SP G  IA+ +       + V      Q R L+ + +  + +
Sbjct: 402 INTEPVIQTAAEEFQPLYSPDGKEIAYVENRN---ILKVYNIKSKQTRTLLPEGHNHSYS 458

Query: 397 -------WSPSGRSLIFSRKKDG---DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                  WSP  + L+ +  ++G   ++ + L   D +G+    +N+    S  +W
Sbjct: 459 DGDWSFAWSPDSKWLV-TDDQNGHMFNSHAALIKADGSGKITYPVNSGFGESGNKW 513



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 84/240 (35%), Gaps = 29/240 (12%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG +    T   +  + E   SPN +++A+    +     +++      +  K+I    +
Sbjct: 304 DGRDNIVKTEPVNGNVTEFVLSPNGKEIAFVNRGE-----IFVTGVESGQ-TKQITRTAA 357

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---------- 308
              + ++S + K  + + +++ + DIY   +Q            IN              
Sbjct: 358 QERSVQWSPDSKSLIYATERNNSWDIYRSTIQQKDEPYFFAATVINTEPVIQTAAEEFQP 417

Query: 309 -YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-----SYFDPVWSPQGDLIA 362
            YSPD  +I +  +R     L V        + +  +          +   WSP    + 
Sbjct: 418 LYSPDGKEIAYVENR---NILKVYNIKSKQTRTLLPEGHNHSYSDGDWSFAWSPDSKWLV 474

Query: 363 FTKFSGEKF--AIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
               +G  F     ++K DGS +    +          W+ +G+ + +   K+G     +
Sbjct: 475 TDDQNGHMFNSHAALIKADGSGKITYPVNSGFGESGNKWALNGKMMTWLSSKNGRKSLAI 534



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 53/286 (18%), Positives = 101/286 (35%), Gaps = 47/286 (16%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  + ++   G     LT   +     P +SP+ + +A+A+    +   V+ +      
Sbjct: 42  YKGDIYLVSAAGGQATPLTI-NEAQDMMPVWSPDGKTLAFASNRYGN-FDVFSIPVAGGN 99

Query: 249 APKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMD------------IYSVDLQSNATE 295
             +    F S    P  FS +GK  +    ++                +YSV L  +   
Sbjct: 100 PVRL--TFNSANDYPYDFSPDGKEVIFGSARNSTAQNVRFASPRVFQNLYSVKLNGSRPH 157

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRIS 342
            L +   +   A ++ D SQIVFE DR+G                +++M    +  ++++
Sbjct: 158 -LISAAGME-KAKFNQDGSQIVFE-DRKGFEDAWRKHHTSSVTRDIWIMDVKKNTYRKLT 214

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-----------N 391
              E    +P++S     I +         +  M  DGS   L +              N
Sbjct: 215 S-FEGEDREPLYSSDQQSIYYLSEKAGNQNLFKMAADGSGTALQLSTFKDNPVRHLSRAN 273

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                +S +G   I++  ++G       SI  +GR+  +   P   
Sbjct: 274 DNTLCFSQNGE--IYTFMENGTPTKLKVSILNDGRDNIVKTEPVNG 317


>gi|312198255|ref|YP_004018316.1| serine/threonine protein kinase [Frankia sp. EuI1c]
 gi|311229591|gb|ADP82446.1| serine/threonine protein kinase [Frankia sp. EuI1c]
          Length = 698

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 50/222 (22%), Positives = 91/222 (40%), Gaps = 23/222 (10%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G  ++  +     V    +   +  +  DG + R L  S D     P +SP+  ++AY  
Sbjct: 476 GTGDAPSVAADGRVAYAGVGGQIVTVRPDGTDARQLATSGDSSAEYPAWSPDGTQIAY-- 533

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               +   +YLM      A +R+ +   +  A  +S +G+  +   +  ++  +  V + 
Sbjct: 534 --FRNTGGLYLMQADGTGA-RRVASVHGLETA--WSPDGREIVF--RDPDSQTLKIVSMA 586

Query: 291 SNATERLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             +   LT   +   I +  S+SPD   IVF SD  G   +Y +  +G+   +++     
Sbjct: 587 DGSVRALTGAPHDGAIPVEPSWSPDGKTIVFGSDDGG---IYAIAPDGTGLHQLAAAGS- 642

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKF-----AIGVMKKDGSQER 384
             + P WSP G ++     S   F      +  MK DGS  R
Sbjct: 643 --WHPTWSPDGRVVFVRDTSARTFFSTTGRVESMKLDGSDVR 682



 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 56/272 (20%), Positives = 103/272 (37%), Gaps = 29/272 (10%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           ++F   +  S I  + + V+  DG   +  T         P  + +  +VAYA       
Sbjct: 447 LVFKRFAADSSINDSPIVVVSPDGTERQLGTGD------APSVAADG-RVAYAGVGG--- 496

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            ++  +      A +   +  S    P +S +G +            +Y +        R
Sbjct: 497 -QIVTVRPDGTDARQLATSGDSSAEYPAWSPDGTQIAYFRNTGG---LYLMQADGTGARR 552

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVW 354
           + +   +    ++SPD  +IVF  D +  + L ++       + ++      A   +P W
Sbjct: 553 VASVHGLET--AWSPDGREIVFR-DPD-SQTLKIVSMADGSVRALTGAPHDGAIPVEPSW 608

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD- 413
           SP G  I F    G  +AI     DG+    L    +   PTWSP GR ++F R      
Sbjct: 609 SPDGKTIVFGSDDGGIYAIA---PDGTGLHQLAAAGS-WHPTWSPDGR-VVFVRDTSART 663

Query: 414 ---TGSKLYSIDLNGRNETLINTPAYASDPQW 442
              T  ++ S+ L+G +   + +   +   QW
Sbjct: 664 FFSTTGRVESMKLDGSDVRSVGSVTASGPVQW 695



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 83/209 (39%), Gaps = 27/209 (12%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TN 299
           ++    D   +++G       AP  +++G R   +        I +V        +L T+
Sbjct: 463 IVVVSPDGTERQLGTGD----APSVAADG-RVAYA---GVGGQIVTVRPDGTDARQLATS 514

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                   ++SPD +QI +  +  G   LY+MQ++G+  +R++        +  WSP G 
Sbjct: 515 GDSSAEYPAWSPDGTQIAYFRNTGG---LYLMQADGTGARRVASVHG---LETAWSPDGR 568

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTG 415
            I F     +   + ++       R L    +  A    P+WSP G++++F     G   
Sbjct: 569 EIVF--RDPDSQTLKIVSMADGSVRALTGAPHDGAIPVEPSWSPDGKTIVFGSDDGG--- 623

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVG 444
             +Y+I  +G     +     +  P W  
Sbjct: 624 --IYAIAPDGTGLHQLAAAG-SWHPTWSP 649



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 70/178 (39%), Gaps = 20/178 (11%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           KR       +++  +           +L          S + D       +      Q+ 
Sbjct: 450 KRFAADSSINDSPIVVVSP--DGTERQLGTGDA----PSVAADGR----VAYAGVGGQIV 499

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            ++ +G+D ++++   ++S   P WSP G  IA+ + +G    + +M+ DG+  R +   
Sbjct: 500 TVRPDGTDARQLATSGDSSAEYPAWSPDGTQIAYFRNTGG---LYLMQADGTGARRVASV 556

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS---DPQWVG 444
             L+   WSP GR ++F  +       K+ S+  +G    L   P   +   +P W  
Sbjct: 557 HGLET-AWSPDGREIVF--RDPDSQTLKIVSM-ADGSVRALTGAPHDGAIPVEPSWSP 610


>gi|302824273|ref|XP_002993781.1| hypothetical protein SELMODRAFT_187603 [Selaginella moellendorffii]
 gi|300138377|gb|EFJ05147.1| hypothetical protein SELMODRAFT_187603 [Selaginella moellendorffii]
          Length = 722

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 96/267 (35%), Gaps = 43/267 (16%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P FSP+ + +A+    DE    +Y+         K    F        +    K  L +
Sbjct: 426 FPVFSPDGESIAFIPDLDEGG--IYVTRLNGSGMTKV---FDKPAFGLSWDKQRKGVLYT 480

Query: 276 VQKDEAMD-------IYSVDLQ-----SNATER---LT-NTLFINISASYSPDSSQIVFE 319
                 +        +  ++            +   LT +    N   S SPD   IVF 
Sbjct: 481 SYGPGFVPEDTIVHIVSILNADELIAGGGGAVKWKILTKSGTKNNAFPSPSPDGKWIVFR 540

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFS----GEKFAI 373
           S R G + LY+M +   ++  + +  E ++ D    WS  G+ IAF+       G  F +
Sbjct: 541 SGRSGHKNLYIMDAIHGEEASLRRLTEGAWTDTMASWSHDGEWIAFSSDRHNPGGGSFQL 600

Query: 374 GVMKKDGSQE-RLL--VEDSNLQAPTWSPSGRSLIFSRKKDG------------DTGSKL 418
             ++ DGSQ  R+L       +  P +SP  RSL+F+    G                ++
Sbjct: 601 YFVRPDGSQLHRVLNSSTGGRVNHPFFSPDSRSLVFTTDYAGVSADPIAVPAQFQPYGEI 660

Query: 419 YSIDLNGRNETLINTPAY-ASDPQWVG 444
           +   ++G     +   AY    P W  
Sbjct: 661 FMARIDGSELVRLTHNAYEDGTPSWGP 687



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 65/411 (15%), Positives = 128/411 (31%), Gaps = 102/411 (24%)

Query: 130 LWD---VKDRKQIIGKKFFSSPASWRKIAHTISDDIY---------QSITGEKGDFNSRI 177
           L+D   V D + I          S +  A   S DI          + +T      +   
Sbjct: 183 LYDRPSVADGRVIFVSTRKPREQSRQSWAAVYSMDIVTKKITRLTPEGVTDYSPSVSPSG 242

Query: 178 LFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRDQILF----EPRFSPNQQKVAYATYD 232
            FV  +   G      +  +D D  + +    S  +++      P +S +   V +    
Sbjct: 243 KFVMVASDDGRGWGGEIEELDTDLYSFQAWDGSGRKLVVKNGGWPSWS-DDSTVFFHRRA 301

Query: 233 DEDILRVY---LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--V 287
           ++    VY      +      +RI         P  S  GK   ++ ++  ++  +    
Sbjct: 302 EDGWWSVYKATFSKSFTAIREERITPPGVHAFTPAASRTGKWIAVATRRAGSLYRHVEVF 361

Query: 288 DLQSNATERLTNTLFINIS----------------------------------------- 306
           DL S    +L+  +                                              
Sbjct: 362 DLGSRKFHKLSELVAPEAHHYNPFVSPESDKIGYHRCRGKGVTPRLEHIKSPVPGISLVR 421

Query: 307 -----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  +SPD   I F  D + +  +YV + NGS    +++  +   F   W  Q   +
Sbjct: 422 VDGDFPVFSPDGESIAFIPDLD-EGGIYVTRLNGSG---MTKVFDKPAFGLSWDKQRKGV 477

Query: 362 AFTKFSGE-------KFAIGVMKKD-----GSQE---RLLVEDS--NLQAPTWSPSGRSL 404
            +T +             + ++  D     G      ++L +    N   P+ SP G+ +
Sbjct: 478 LYTSYGPGFVPEDTIVHIVSILNADELIAGGGGAVKWKILTKSGTKNNAFPSPSPDGKWI 537

Query: 405 IFSRKKDGDTGSKLYSID-LNGRNETLI---------NTPAYASDPQWVGF 445
           +F   + G     LY +D ++G   +L             +++ D +W+ F
Sbjct: 538 VFRSGRSGHKN--LYIMDAIHGEEASLRRLTEGAWTDTMASWSHDGEWIAF 586



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 63/174 (36%), Gaps = 22/174 (12%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILA 262
           + LT S  +    P  SP+ + + + +       L +       + + +R+         
Sbjct: 515 KILTKSGTKNNAFPSPSPDGKWIVFRSGRSGHKNLYIMDAIHGEEASLRRLTEGAWTDTM 574

Query: 263 PRFSSNGKRALISVQK----DEAMDIYSVDLQSNATERLTNTL--FINISASYSPDSSQI 316
             +S +G+    S  +      +  +Y V    +   R+ N+          +SPDS  +
Sbjct: 575 ASWSHDGEWIAFSSDRHNPGGGSFQLYFVRPDGSQLHRVLNSSTGGRVNHPFFSPDSRSL 634

Query: 317 VFESDREG--------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           VF +D  G                ++++ + +GS+  R++ +       P W P
Sbjct: 635 VFTTDYAGVSADPIAVPAQFQPYGEIFMARIDGSELVRLTHNA-YEDGTPSWGP 687



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 100/283 (35%), Gaps = 20/283 (7%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNS---LCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           ++       + R++FVS        + S   +  MD     I  LTP      + P  SP
Sbjct: 182 ALYDRPSVADGRVIFVSTRKPREQSRQSWAAVYSMDIVTKKITRLTPEG-VTDYSPSVSP 240

Query: 222 NQQKVAYATYDDED-ILRVYLMDTRIDRAPKRIGNFRSMIL----APRFSSNGKRALISV 276
           + + V  A+ D       +  +DT +       G+ R +++     P +S +        
Sbjct: 241 SGKFVMVASDDGRGWGGEIEELDTDLYSFQAWDGSGRKLVVKNGGWPSWSDDSTVFFHRR 300

Query: 277 QKDEAMDIYSVDLQSN----ATERLTNTLFINISASYSPDSSQIVFESDREGK--EQLYV 330
            +D    +Y      +      ER+T       + + S     I   + R G     + V
Sbjct: 301 AEDGWWSVYKATFSKSFTAIREERITPPGVHAFTPAASRTGKWIAVATRRAGSLYRHVEV 360

Query: 331 MQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                    ++S+    EA +++P  SP+ D I + +  G+     +         + + 
Sbjct: 361 FDLGSRKFHKLSELVAPEAHHYNPFVSPESDKIGYHRCRGKGVTPRLEHIKSPVPGISLV 420

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             +   P +SP G S+ F    D      +Y   LNG   T +
Sbjct: 421 RVDGDFPVFSPDGESIAFIPDLDEGG---IYVTRLNGSGMTKV 460


>gi|116623521|ref|YP_825677.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226683|gb|ABJ85392.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 877

 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 64/402 (15%), Positives = 136/402 (33%), Gaps = 60/402 (14%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDS--IPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
           +++   QR  +  +       ++IT      + R+  W + G + ++       G +   
Sbjct: 414 IIAALDQRGGLLRVADAGGTPEQITKAPEGVLQRWPQWLA-GGEYVLFTS-STNGTNFDE 471

Query: 126 VEFRLWDVKDR--KQIIGKKFFSS--PASWRKIAHT---ISDDIYQSITGEKGDFNSRIL 178
            E ++  VK R  + ++   F+    P+      H     +     +    +G     + 
Sbjct: 472 AELQVVSVKTREIRTVLRGGFYGRYLPSGHLVYGHNGIIFAAPFDPARAQLRGTPVPVVE 531

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
            V+  V SG  +                            FS +   +  +        R
Sbjct: 532 DVAFHVSSGGGQFD--------------------------FSQSGLFLYLSGKPQNSNSR 565

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +  +D+      + +G       APR S +G+   +S+    + D++  DLQ  +  RLT
Sbjct: 566 IAWVDSA--GKVENLGAAPGAYSAPRLSPDGRMLAVSI--GASPDLWIYDLQRESFSRLT 621

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                N    +S D   I++ S   G   ++  +++G+ Q +              +P G
Sbjct: 622 LNGHSNRIPVWSSDGRHIIYSSAYGGTYDVWWARADGAGQPQSLLHANTMTLAYSLAPDG 681

Query: 359 DLIAFTKFS-GEKFAIGVMKKD---------GSQERLLVEDSNLQ-APTWSPSGRSLIFS 407
             +A+ + + G    I ++  D         G     L   + ++  P +SP GR + + 
Sbjct: 682 RWLAYQQQTVGADGDIWILPLDPADPEHPKPGKPVAYLQTPTTMEGVPAFSPDGRWIAYG 741

Query: 408 RKKDGDTGSKLYSIDLN------GRNETLINTPAYASDPQWV 443
             + G    ++Y    +      G       +     +P W 
Sbjct: 742 SGESG--VMEIYVRSFDPATGQAGVAGKFPVSSGGGWNPVWS 781



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 100/289 (34%), Gaps = 24/289 (8%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            +LF S +  +   +  L V+      IR +        + P                 D
Sbjct: 457 YVLFTSSTNGTNFDEAELQVVSVKTREIRTVLRGGFYGRYLPSGHLVYGHNGIIFAAPFD 516

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNAT 294
             R  L  T +        +  S      FS +G    +S + ++    I  VD      
Sbjct: 517 PARAQLRGTPVPVVEDVAFHVSSGGGQFDFSQSGLFLYLSGKPQNSNSRIAWVDSAGK-V 575

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           E L        +   SPD   +           L++         R++ +  ++   PVW
Sbjct: 576 ENLGAAPGAYSAPRLSPDGRMLAVS--IGASPDLWIYDLQRESFSRLTLNGHSNRI-PVW 632

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDG-SQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           S  G  I ++   G  + +   + DG  Q + LL  ++   A + +P GR L + ++  G
Sbjct: 633 SSDGRHIIYSSAYGGTYDVWWARADGAGQPQSLLHANTMTLAYSLAPDGRWLAYQQQTVG 692

Query: 413 DTGSKLYSIDLN---------GRNETLINTP-------AYASDPQWVGF 445
             G  ++ + L+         G+    + TP       A++ D +W+ +
Sbjct: 693 ADG-DIWILPLDPADPEHPKPGKPVAYLQTPTTMEGVPAFSPDGRWIAY 740



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 72/210 (34%), Gaps = 16/210 (7%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +     +   L++  +D  P  +   R  +     S++G R    V+   +  +    L 
Sbjct: 295 WRATRAVERPLLNMSVDLGPDAVVGLRGTV---AVSADGSRIAYPVRSGTSESLAVRVLN 351

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 L  T  +     +SPD   + F ++R    +L  +   G     ++     +  
Sbjct: 352 QPKPTVLVGTEGM-TLPFFSPDGQWVGFFAER----KLKKISVQGGAA--VTLCDAPNGR 404

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSR 408
              W   G +IA     G    + V    G+ E++    E    + P W   G  ++F+ 
Sbjct: 405 GGSWGEDGTIIAALDQRGGL--LRVADAGGTPEQITKAPEGVLQRWPQWLAGGEYVLFTS 462

Query: 409 KKDGDT--GSKLYSIDLNGRNETLINTPAY 436
             +G     ++L  + +  R    +    +
Sbjct: 463 STNGTNFDEAELQVVSVKTREIRTVLRGGF 492



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 50/323 (15%), Positives = 88/323 (27%), Gaps = 74/323 (22%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           SRI +   S  S     SL V   +      L  +    L  P FSP+ Q V +  + + 
Sbjct: 331 SRIAYPVRSGTS----ESLAVRVLNQPKPTVLVGTEGMTL--PFFSPDGQWVGF--FAER 382

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            + ++ +                       +  +G       Q+     +  V       
Sbjct: 383 KLKKISVQGGAAVTLCDAPNGRGG-----SWGEDGTIIAALDQRGG---LLRVADAGGTP 434

Query: 295 ERLTNTLF--INISASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQKRISQDKEAS 348
           E++T      +     +      ++F S   G      +L V+     + + + +     
Sbjct: 435 EQITKAPEGVLQRWPQWLAGGEYVLFTSSTNGTNFDEAELQVVSVKTREIRTVLRGGFYG 494

Query: 349 YFDP----VWSPQG----------------------DLIAFTKFSGE------------- 369
            + P    V+   G                      + +AF   SG              
Sbjct: 495 RYLPSGHLVYGHNGIIFAAPFDPARAQLRGTPVPVVEDVAFHVSSGGGQFDFSQSGLFLY 554

Query: 370 --------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                      I  +   G  E L        AP  SP GR L  S          L+  
Sbjct: 555 LSGKPQNSNSRIAWVDSAGKVENLGAAPGAYSAPRLSPDGRMLAVSI----GASPDLWIY 610

Query: 422 DLNGRNETLINTPAYA-SDPQWV 443
           DL   + + +    ++   P W 
Sbjct: 611 DLQRESFSRLTLNGHSNRIPVWS 633



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/143 (11%), Positives = 46/143 (32%), Gaps = 13/143 (9%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT------ 244
             +     DGA         + +      +P+ + +AY          ++++        
Sbjct: 649 YDVWWARADGAGQPQSLLHANTMTLAYSLAPDGRWLAYQQQTVGADGDIWILPLDPADPE 708

Query: 245 --RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNA---TERL 297
             +  +    +    +M   P FS +G+       +   M+IY    D  +       + 
Sbjct: 709 HPKPGKPVAYLQTPTTMEGVPAFSPDGRWIAYGSGESGVMEIYVRSFDPATGQAGVAGKF 768

Query: 298 TNTLFINISASYSPDSSQIVFES 320
             +     +  +S ++ ++ + +
Sbjct: 769 PVSSGGGWNPVWSRNAQELFYTA 791



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 33/97 (34%), Gaps = 6/97 (6%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                   S  G  IA+   SG   ++ V   +  +  +LV    +  P +SP G+ + F
Sbjct: 319 GLRGTVAVSADGSRIAYPVRSGTSESLAVRVLNQPKPTVLVGTEGMTLPFFSPDGQWVGF 378

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             ++      KL  I + G     +          W 
Sbjct: 379 FAER------KLKKISVQGGAAVTLCDAPNGRGGSWG 409


>gi|253565676|ref|ZP_04843131.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251945955|gb|EES86362.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 1077

 Score =  117 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 74/202 (36%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y V       +RLT+ +   +   +SPD   I F    +G  +
Sbjct: 34  NGNEIVFSYAGD----LYKVPASGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGNTE 89

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKF--AIG 374
           +Y M + G +  RI+       D       P      W+P G  I +     + F   + 
Sbjct: 90  VYTMPATGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGKLF 149

Query: 375 VMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSID- 422
            + K+G   +   L E       ++SP G+ L ++R            G     ++  + 
Sbjct: 150 TVDKEGGLSEVIPLPEGGFC---SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNP 206

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            N   E + N  A    P W+G
Sbjct: 207 GNKTVENVTNNVAQDIFPMWIG 228



 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 139/342 (40%), Gaps = 26/342 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKK-FFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            +   +R+  EFR W             +     +   + + ++ DI+    G++  F S
Sbjct: 176 KQLAYNRVMREFRTWKYYKGGMADDIWVYNPGNKTVENVTNNVAQDIFPMWIGDEIFFLS 235

Query: 176 -RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   ++    +   K ++ V +    ++++ +   + I+FE     N   +        
Sbjct: 236 DRDRIMNIFAYNTKTKQTVKVTNFTEYDVKFPSVHGNTIVFE-----NGGYIYKMDAAAR 290

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +V +     +   +  +    + + A   S +G R +++ +     +++++ ++   
Sbjct: 291 KAEKVNITLASDNIYARTDLKEGANYVTAASLSPDGARMVVTSRG----EVFNLPVEKGV 346

Query: 294 TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ +T +    +  A +SPD +QI + SD  G+ +LY+  + G +  +++   +    D 
Sbjct: 347 TKNITRSPGAHDRDAQWSPDGTQIAYISDATGETELYLQNAAGGEPMQLTHKNDTYIRDF 406

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            WSP    I +         + ++     +  LL++D        T+SP    L ++R  
Sbjct: 407 KWSPDSKKIVYMDRKN---RVNLLDVASGKVSLLLQDPVGVPGGVTFSPDSEWLTYTRM- 462

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
             +  + +Y  ++  + E  +        +P +++D +++ F
Sbjct: 463 GKNEINVVYVYNIAEKKEYPVTDKWYNSSSPVFSADGKYLIF 504



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 76/216 (35%), Gaps = 37/216 (17%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N  ++ ++     D+ +V           +R+ +     + PRFS +GK    + Q D  
Sbjct: 34  NGNEIVFSY--AGDLYKV----PASGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGN 87

Query: 282 MDIYSVDLQSNATERLT-------NTLFINISA-----SYSPDSSQIVFESD-REG-KEQ 327
            ++Y++        R+T       + L   +       +++PD  +IV+ +   +G   +
Sbjct: 88  TEVYTMPATGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGK 147

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFAIGVM 376
           L+ +   G   + I   +        +SP G  +A+ +             G    I V 
Sbjct: 148 LFTVDKEGGLSEVIPLPEGGF---CSYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVY 204

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
                    +  + +    P W   G  + F   +D
Sbjct: 205 NPGNKTVENVTNNVAQDIFPMWI--GDEIFFLSDRD 238



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 93/268 (34%), Gaps = 43/268 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   + LT S       PRFSP+ + +A+    D +   VY M       P 
Sbjct: 45  DLYKVPASGGEAQRLT-SHVGYEMFPRFSPDGKTIAFTGQYDGNT-EVYTM-PATGGEPL 101

Query: 252 RIG------------NFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERL 297
           RI                   +   ++ +G+R +    +    +  +++VD +   +E +
Sbjct: 102 RITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGKLFTVDKEGGLSEVI 161

Query: 298 TNTLFINISASYSPDSSQIVFES----DREGK-------EQLYVMQSNGSDQKRISQDKE 346
                     SYSPD  Q+ +       R  K       + ++V        + ++ +  
Sbjct: 162 PLPEG--GFCSYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNPGNKTVENVTNNVA 219

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
              F P+W   GD I F         I        Q   +    + +++ P+    G ++
Sbjct: 220 QDIF-PMW--IGDEIFFLSDRDRIMNIFAYNTKTKQTVKVTNFTEYDVKFPSVH--GNTI 274

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +F      + G  +Y +D   R    +N
Sbjct: 275 VF------ENGGYIYKMDAAARKAEKVN 296



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 84/223 (37%), Gaps = 26/223 (11%)

Query: 107 GAQVLVTGRVIKEGKDRLRV--EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           GA  +    +  +G  R+ V     ++++   K +      S  A  R            
Sbjct: 313 GANYVTAASLSPDGA-RMVVTSRGEVFNLPVEKGVTKNITRSPGAHDRDA---------- 361

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                  D  ++I ++S++      +  L + +  G     LT   D  + + ++SP+ +
Sbjct: 362 ---QWSPDG-TQIAYISDATG----ETELYLQNAAGGEPMQLTHKNDTYIRDFKWSPDSK 413

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMD 283
           K+ Y    +    RV L+D    +    + +   +     FS + +    + + K+E   
Sbjct: 414 KIVYMDRKN----RVNLLDVASGKVSLLLQDPVGVPGGVTFSPDSEWLTYTRMGKNEINV 469

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +Y  ++       +T+  + + S  +S D   ++F S R+   
Sbjct: 470 VYVYNIAEKKEYPVTDKWYNSSSPVFSADGKYLIFSSARDFNP 512


>gi|226349776|ref|YP_002776890.1| hypothetical protein ROP_pROB01-05390 [Rhodococcus opacus B4]
 gi|226245691|dbj|BAH56038.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 309

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 106/264 (40%), Gaps = 36/264 (13%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF------SPNQQKVAYATYDDEDILRVY 240
                 + V + DG+ +R +TP+    + + R+      SP+  ++AY          + 
Sbjct: 49  DDGWGQVFVANVDGSGLRQVTPTVADDMSDGRWGNNAALSPDGAQLAYT----RGGRFIE 104

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           ++D         +         P FS +G     S        I  ++   +    +   
Sbjct: 105 VVDLESGD----VRTVHEDGYQPVFSPDGSSIAFSKSDG---SISIMNTDGSDLRVIAPA 157

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              ++ A++SPD S++VF +D      +  + + G + K + +D+  +  DP +SP G  
Sbjct: 158 ESGSV-ATFSPDGSRVVFTAD----GYIVEVPTTGGESKVLLRDQFWN-SDPAYSPDGST 211

Query: 361 IAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR--KKDGD--- 413
           + F+   G      I  M   G +   L +   +  P ++P G  ++++R   + G+   
Sbjct: 212 LVFSSNRGGNHGSEIYSMPAGGGEITRLTDTYAV-HPQFTPDGSRILYTRATTQSGELVV 270

Query: 414 -----TGSKLYSIDLNGRNETLIN 432
                  ++L S++ +G ++  + 
Sbjct: 271 DISTSNSAELASMNPDGSDQKRLT 294



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 22/231 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------SSNGKRAL 273
           SP        ++DD    +V++ +       +        +   R+      S +G +  
Sbjct: 37  SPPAPTPVIVSFDDGWG-QVFVANVDGSGLRQVTPTVADDMSDGRWGNNAALSPDGAQLA 95

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +        I  VDL+S      T          +SPD S I F S  +G   + +M +
Sbjct: 96  YTR---GGRFIEVVDLESGDVR--TVHE-DGYQPVFSPDGSSIAF-SKSDGS--ISIMNT 146

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +GSD + I+  +  S     +SP G  + FT    + + + V    G  + LL +     
Sbjct: 147 DGSDLRVIAPAESGSVA--TFSPDGSRVVFTA---DGYIVEVPTTGGESKVLLRDQFWNS 201

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            P +SP G +L+FS  + G+ GS++YS+   G   T + T  YA  PQ+  
Sbjct: 202 DPAYSPDGSTLVFSSNRGGNHGSEIYSMPAGGGEITRL-TDTYAVHPQFTP 251



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 52/257 (20%), Positives = 101/257 (39%), Gaps = 37/257 (14%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
              +  R++  T++DD    ++  +   N+ +      +        + V+D +  ++R 
Sbjct: 60  VDGSGLRQVTPTVADD----MSDGRWGNNAALSPDGAQLAYTRGGRFIEVVDLESGDVRT 115

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +        ++P FSP+   +A++  D      + +M+T      + I    S  +A  F
Sbjct: 116 VHEDG----YQPVFSPDGSSIAFSKSDG----SISIMNTD-GSDLRVIAPAESGSVA-TF 165

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G R + +        I  V      ++ L    F N   +YSPD S +VF S+R G 
Sbjct: 166 SPDGSRVVFTADG----YIVEVPTTGGESKVLLRDQFWNSDPAYSPDGSTLVFSSNRGGN 221

Query: 326 --EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-------------TKFSGEK 370
              ++Y M + G +  R++   +     P ++P G  I +                S   
Sbjct: 222 HGSEIYSMPAGGGEITRLT---DTYAVHPQFTPDGSRILYTRATTQSGELVVDISTSNSA 278

Query: 371 FAIGVMKKDGSQERLLV 387
             +  M  DGS ++ L 
Sbjct: 279 -ELASMNPDGSDQKRLT 294



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 67/172 (38%), Gaps = 24/172 (13%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               S+ +M+ DG+++R + P+    +    FSP+  +V +            +      
Sbjct: 136 KSDGSISIMNTDGSDLRVIAPAESGSVA--TFSPDGSRVVFTADGY------IVEVPTTG 187

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINI 305
              K +   +     P +S +G   + S  +      +IYS+        RLT+T    +
Sbjct: 188 GESKVLLRDQFWNSDPAYSPDGSTLVFSSNRGGNHGSEIYSMPAGGGEITRLTDTYA--V 245

Query: 306 SASYSPDSSQIVFESDREGKEQLYV------------MQSNGSDQKRISQDK 345
              ++PD S+I++        +L V            M  +GSDQKR++   
Sbjct: 246 HPQFTPDGSRILYTRATTQSGELVVDISTSNSAELASMNPDGSDQKRLTPRS 297


>gi|312886298|ref|ZP_07745911.1| WD40 domain protein beta Propeller [Mucilaginibacter paludis DSM
           18603]
 gi|311301243|gb|EFQ78299.1| WD40 domain protein beta Propeller [Mucilaginibacter paludis DSM
           18603]
          Length = 1067

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 93/248 (37%), Gaps = 24/248 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---------FR 257
             +  ++   P  SP+ + + + +  +   + +YL D    +  K++ +         F 
Sbjct: 298 FHNSGEMNVAPAISPDGKYLTFLSEKNLFTIDLYLADAHTGKVIKKLTSKISNTHIDEFN 357

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINIS-ASYSPDSSQ 315
            +  A  ++ + KR   SV       +  VD+ +    + +        S  S+SP+   
Sbjct: 358 FIESAGAWAPDSKRFAFSVFSRGRNKLVIVDIATGKTLDEIAMGKAEQFSYVSWSPNGQD 417

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------ 369
           IVF    EG+  LY+         +++ DK  S + P +S  G  I F            
Sbjct: 418 IVFSGMSEGESDLYMYNLGTKKLTQLTNDK-YSDYQPSFSHDGKKIVFASDRTTYDKSLS 476

Query: 370 ---KFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               F + VM       + +     +N   P +S   + + F   +DG      Y++  +
Sbjct: 477 QTITFNLAVMDVATGLVKDIDVFNGANNLNPQFSSDDQQIYFLSNRDGFRNLYRYTL-AD 535

Query: 425 GRNETLIN 432
           G+ E L +
Sbjct: 536 GKVEQLTD 543



 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 78/217 (35%), Gaps = 18/217 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNG 269
           + I     ++P+ ++ A++ +       V ++D    +    I   ++   +   +S NG
Sbjct: 357 NFIESAGAWAPDSKRFAFSVFSRGRNKLV-IVDIATGKTLDEIAMGKAEQFSYVSWSPNG 415

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--- 326
           +  + S   +   D+Y  +L +    +LTN  + +   S+S D  +IVF SDR   +   
Sbjct: 416 QDIVFSGMSEGESDLYMYNLGTKKLTQLTNDKYSDYQPSFSHDGKKIVFASDRTTYDKSL 475

Query: 327 ------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  L VM       K I     A+  +P +S     I F         +       
Sbjct: 476 SQTITFNLAVMDVATGLVKDIDVFNGANNLNPQFSSDDQQIYFLSNRDGFRNLYRYTLAD 535

Query: 381 SQERLLVE------DSNLQAPTWS-PSGRSLIFSRKK 410
            +   L +           AP  S  +   + +S  +
Sbjct: 536 GKVEQLTDLFTGISGITEYAPALSISNNNDIAYSYYR 572



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 102/270 (37%), Gaps = 31/270 (11%)

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS-RILFV 180
           +   ++  L D    K I             KI++T  D+     +      +S R  F 
Sbjct: 324 NLFTIDLYLADAHTGKVIKKLT--------SKISNTHIDEFNFIESAGAWAPDSKRFAFS 375

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
             S      +N L ++D   G  +  +   + +      +SPN Q + ++   + +   +
Sbjct: 376 VFSRG----RNKLVIVDIATGKTLDEIAMGKAEQFSYVSWSPNGQDIVFSGMSEGES-DL 430

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE---------AMDIYSVDLQ 290
           Y+ +    +  + + N +     P FS +GK+ + +  +             ++  +D+ 
Sbjct: 431 YMYNLGTKKLTQ-LTNDKYSDYQPSFSHDGKKIVFASDRTTYDKSLSQTITFNLAVMDVA 489

Query: 291 SNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +   + +       N++  +S D  QI F S+R+G   LY         ++++       
Sbjct: 490 TGLVKDIDVFNGANNLNPQFSSDDQQIYFLSNRDGFRNLYRYTLADGKVEQLTDLFTGIS 549

Query: 350 FDPVWSP-----QGDLIAFTKFSGEKFAIG 374
               ++P       + IA++ +  +K+A+ 
Sbjct: 550 GITEYAPALSISNNNDIAYSYYRAQKYALY 579


>gi|189464174|ref|ZP_03012959.1| hypothetical protein BACINT_00511 [Bacteroides intestinalis DSM
           17393]
 gi|189437964|gb|EDV06949.1| hypothetical protein BACINT_00511 [Bacteroides intestinalis DSM
           17393]
          Length = 1082

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 63/342 (18%), Positives = 140/342 (40%), Gaps = 26/342 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKK-FFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            +   +R   EFR W             +  +  S   I + ++ DI+    G+   F S
Sbjct: 176 KRLAYNRTMREFRTWKYYKGGMADDVWIYDPAKKSVENITNNVAQDIFPMWIGDDIFFLS 235

Query: 176 -RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   ++  V +   K +  V +    ++++ + S + I+FE     N   +        
Sbjct: 236 DRDRTMNIFVYNTKTKQTSKVTNFTEYDVKFPSASGNTIVFE-----NGGYIYKMDAATR 290

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +V +     +   +  I N    + A   S +G+R +++ +     +++++      
Sbjct: 291 QPEKVNISLASDNIYARSAIKNGAKYLTAASASPDGERVVVTARG----EVFNLPSTKGV 346

Query: 294 TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ +T T      +A +S D   I + SD  G+ +LY+  +   +  +++++ +      
Sbjct: 347 TKNITRTPGAHERNAQWSSDGKYIAYISDATGETELYLQDAVEGNPVQLTKNNDTYIRSF 406

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            WSP    I +T        I ++     Q  +L++D     Q  T+SP  + L ++R  
Sbjct: 407 EWSPDSKKIVYTDRQN---RINLLDVASRQVTMLLQDPMGEPQDVTFSPDSKWLTYTRDA 463

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           D +  + +Y  D+ G+ E  +        +P +++D +++ F
Sbjct: 464 DNEI-TVVYVYDIAGKKEYPVTDKWYNSSSPVFSTDGKYLIF 504



 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 77/202 (38%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y V +     +RLT+ +   +   +SPD   I F    +G  +
Sbjct: 34  NGNEIVFSYAGD----LYRVPVTGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGNTE 89

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKF--AIG 374
           +Y + + G + +R++       D       P      W+P G  I +     + F   + 
Sbjct: 90  VYTIPATGGEPQRLTYTATNSRDDLGDRMGPNNIVMTWTPDGKQIIYRNRISDGFAGKLY 149

Query: 375 VMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSIDL 423
            + ++G    +  L E       ++SP G+ L ++R            G     ++  D 
Sbjct: 150 SVNQEGGMPEIIPLPEGGFC---SYSPDGKRLAYNRTMREFRTWKYYKGGMADDVWIYDP 206

Query: 424 NGRN-ETLINTPAYASDPQWVG 444
             ++ E + N  A    P W+G
Sbjct: 207 AKKSVENITNNVAQDIFPMWIG 228



 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 79/220 (35%), Gaps = 13/220 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MIL 261
            R    +  + L     SP+ ++V      +                 K I         
Sbjct: 306 ARSAIKNGAKYLTAASASPDGERVVVTARGE------VFNLPSTKGVTKNITRTPGAHER 359

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFES 320
             ++SS+GK            ++Y  D       +LT N      S  +SPDS +IV+  
Sbjct: 360 NAQWSSDGKYIAYISDATGETELYLQDAVEGNPVQLTKNNDTYIRSFEWSPDSKKIVYT- 418

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKD 379
           DR+   ++ ++         + QD      D  +SP    + +T+ +  +   + V    
Sbjct: 419 DRQ--NRINLLDVASRQVTMLLQDPMGEPQDVTFSPDSKWLTYTRDADNEITVVYVYDIA 476

Query: 380 GSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           G +E  + +   N  +P +S  G+ LIFS  +D +     
Sbjct: 477 GKKEYPVTDKWYNSSSPVFSTDGKYLIFSSARDFNPTYGW 516



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 86/246 (34%), Gaps = 37/246 (15%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N  ++ ++     D+ RV +         +R+ +     + PRFS +GK    + Q D  
Sbjct: 34  NGNEIVFSY--AGDLYRVPV----TGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGN 87

Query: 282 MDIYSVDLQSNATERLT-------NTLFINISA-----SYSPDSSQIVFESD-REG-KEQ 327
            ++Y++       +RLT       + L   +       +++PD  QI++ +   +G   +
Sbjct: 88  TEVYTIPATGGEPQRLTYTATNSRDDLGDRMGPNNIVMTWTPDGKQIIYRNRISDGFAGK 147

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFAIGVM 376
           LY +   G   + I    E  +    +SP G  +A+ +             G    + + 
Sbjct: 148 LYSVNQEGGMPE-IIPLPEGGF--CSYSPDGKRLAYNRTMREFRTWKYYKGGMADDVWIY 204

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                    +  + +    P W   G  + F   +D      +Y+      ++    T  
Sbjct: 205 DPAKKSVENITNNVAQDIFPMWI--GDDIFFLSDRDRTMNIFVYNTKTKQTSKVTNFTEY 262

Query: 436 YASDPQ 441
               P 
Sbjct: 263 DVKFPS 268



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 95/268 (35%), Gaps = 43/268 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   + LT S       PRFSP+ + +A+    D +   VY +       P+
Sbjct: 45  DLYRVPVTGGEAQRLT-SHVGYEMFPRFSPDGKTIAFTGQYDGNT-EVYTI-PATGGEPQ 101

Query: 252 RIG------------NFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERL 297
           R+                   +   ++ +GK+ +    +    A  +YSV+ +    E +
Sbjct: 102 RLTYTATNSRDDLGDRMGPNNIVMTWTPDGKQIIYRNRISDGFAGKLYSVNQEGGMPEII 161

Query: 298 TNTLFINISASYSPDSSQIVFESD----REGK-------EQLYVMQSNGSDQKRISQDKE 346
                     SYSPD  ++ +       R  K       + +++        + I+ +  
Sbjct: 162 PLPEG--GFCSYSPDGKRLAYNRTMREFRTWKYYKGGMADDVWIYDPAKKSVENITNNVA 219

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
              F P+W   GD I F         I V      Q   +    + +++ P+ S  G ++
Sbjct: 220 QDIF-PMW--IGDDIFFLSDRDRTMNIFVYNTKTKQTSKVTNFTEYDVKFPSAS--GNTI 274

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +F      + G  +Y +D   R    +N
Sbjct: 275 VF------ENGGYIYKMDAATRQPEKVN 296



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 79/215 (36%), Gaps = 9/215 (4%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGII--KNSLCVMDRDGANIRYLTPSRDQILF 215
            SD+IY     + G         S      ++  +  +  +       + +T +      
Sbjct: 300 ASDNIYARSAIKNGAKYLTAASASPDGERVVVTARGEVFNLPSTKGVTKNITRTPGAHER 359

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             ++S + + +AY + D      +YL D       +   N  + I +  +S + K+ + +
Sbjct: 360 NAQWSSDGKYIAYIS-DATGETELYLQDAVEGNPVQLTKNNDTYIRSFEWSPDSKKIVYT 418

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGK-EQLYVMQS 333
              D    I  +D+ S     L           ++SPDS  + +  D + +   +YV   
Sbjct: 419 ---DRQNRINLLDVASRQVTMLLQDPMGEPQDVTFSPDSKWLTYTRDADNEITVVYVYDI 475

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            G  +  ++ DK  +   PV+S  G  + F+    
Sbjct: 476 AGKKEYPVT-DKWYNSSSPVFSTDGKYLIFSSARD 509



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 85/223 (38%), Gaps = 26/223 (11%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFR--LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           GA+ L       +G+ R+ V  R  ++++   K +  K    +P +  + A   SD  Y 
Sbjct: 313 GAKYLTAASASPDGE-RVVVTARGEVFNLPSTKGVT-KNITRTPGAHERNAQWSSDGKY- 369

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                       I ++S++      +  L + D    N   LT + D  +    +SP+ +
Sbjct: 370 ------------IAYISDATG----ETELYLQDAVEGNPVQLTKNNDTYIRSFEWSPDSK 413

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           K+ Y    +    R+ L+D    +    + +         FS + K    +   D  + +
Sbjct: 414 KIVYTDRQN----RINLLDVASRQVTMLLQDPMGEPQDVTFSPDSKWLTYTRDADNEITV 469

Query: 285 -YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            Y  D+       +T+  + + S  +S D   ++F S R+   
Sbjct: 470 VYVYDIAGKKEYPVTDKWYNSSSPVFSTDGKYLIFSSARDFNP 512


>gi|60681997|ref|YP_212141.1| putative exported tricorn protease [Bacteroides fragilis NCTC 9343]
 gi|60493431|emb|CAH08217.1| putative exported tricorn protease [Bacteroides fragilis NCTC 9343]
          Length = 1077

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 74/202 (36%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y V       +RLT+ +   +   +SPD   I F    +G  +
Sbjct: 34  NGNEIVFSYAGD----LYKVPASGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGNTE 89

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKF--AIG 374
           +Y M + G +  RI+       D       P      W+P G  I +     + F   + 
Sbjct: 90  VYTMPATGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGKLF 149

Query: 375 VMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSID- 422
            + K+G   +   L E       ++SP G+ L ++R            G     ++  + 
Sbjct: 150 TVDKEGGLSEVIPLPEGGFC---SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNP 206

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            N   E + N  A    P W+G
Sbjct: 207 GNKTVENVTNNVAQDIFPMWIG 228



 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 139/342 (40%), Gaps = 26/342 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKK-FFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            +   +R+  EFR W             +     +   + + ++ DI+    G++  F S
Sbjct: 176 KQLAYNRVMREFRTWKYYKGGMADDIWVYNPGNKTVENVTNNVAQDIFPMWIGDEIFFLS 235

Query: 176 -RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   ++    +   K ++ V +    ++++ +   + I+FE     N   +        
Sbjct: 236 DRDRIMNIFAYNTKTKQTVKVTNFTEYDVKFPSVHGNTIVFE-----NGGYIYKMDAAAR 290

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +V +     +   +  +    + + A   S +G R +++ +     +++++ ++   
Sbjct: 291 KAEKVNITLASDNIYARTDLKEGANYVTAASLSPDGARMVVTSRG----EVFNLPVEKGV 346

Query: 294 TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ +T +    +  A +SPD +QI + SD  G+ +LY+  + G +  +++   +    D 
Sbjct: 347 TKNITRSPGAHDRDAQWSPDGTQIAYISDATGETELYLQNAAGGEPMQLTHKNDTYIRDF 406

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            WSP    I +         + ++     +  LL++D        T+SP    L ++R  
Sbjct: 407 KWSPDSKKIVYMDRKN---RVNLLDVASGKVSLLLQDPVGVPGGVTFSPDSEWLTYTRM- 462

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
             +  + +Y  ++  + E  +        +P +++D +++ F
Sbjct: 463 GKNEINVVYVYNIAEKKEYPVTDKWYNSSSPVFSADGKYLIF 504



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 76/216 (35%), Gaps = 37/216 (17%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N  ++ ++     D+ +V           +R+ +     + PRFS +GK    + Q D  
Sbjct: 34  NGNEIVFSY--AGDLYKV----PASGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGN 87

Query: 282 MDIYSVDLQSNATERLT-------NTLFINISA-----SYSPDSSQIVFESD-REG-KEQ 327
            ++Y++        R+T       + L   +       +++PD  +IV+ +   +G   +
Sbjct: 88  TEVYTMPATGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGK 147

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFAIGVM 376
           L+ +   G   + I   +        +SP G  +A+ +             G    I V 
Sbjct: 148 LFTVDKEGGLSEVIPLPEGGF---CSYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVY 204

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
                    +  + +    P W   G  + F   +D
Sbjct: 205 NPGNKTVENVTNNVAQDIFPMWI--GDEIFFLSDRD 238



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 93/268 (34%), Gaps = 43/268 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   + LT S       PRFSP+ + +A+    D +   VY M       P 
Sbjct: 45  DLYKVPASGGEAQRLT-SHVGYEMFPRFSPDGKTIAFTGQYDGNT-EVYTM-PATGGEPL 101

Query: 252 RIG------------NFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERL 297
           RI                   +   ++ +G+R +    +    +  +++VD +   +E +
Sbjct: 102 RITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGKLFTVDKEGGLSEVI 161

Query: 298 TNTLFINISASYSPDSSQIVFES----DREGK-------EQLYVMQSNGSDQKRISQDKE 346
                     SYSPD  Q+ +       R  K       + ++V        + ++ +  
Sbjct: 162 PLPEG--GFCSYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNPGNKTVENVTNNVA 219

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
              F P+W   GD I F         I        Q   +    + +++ P+    G ++
Sbjct: 220 QDIF-PMW--IGDEIFFLSDRDRIMNIFAYNTKTKQTVKVTNFTEYDVKFPSVH--GNTI 274

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +F      + G  +Y +D   R    +N
Sbjct: 275 VF------ENGGYIYKMDAAARKAEKVN 296



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 84/223 (37%), Gaps = 26/223 (11%)

Query: 107 GAQVLVTGRVIKEGKDRLRV--EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           GA  +    +  +G  R+ V     ++++   K +      S  A  R            
Sbjct: 313 GANYVTAASLSPDGA-RMVVTSRGEVFNLPVEKGVTKNITRSPGAHDRDA---------- 361

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                  D  ++I ++S++      +  L + +  G     LT   D  + + ++SP+ +
Sbjct: 362 ---QWSPDG-TQIAYISDATG----ETELYLQNAAGGEPMQLTHKNDTYIRDFKWSPDSK 413

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMD 283
           K+ Y    +    RV L+D    +    + +   +     FS + +    + + K+E   
Sbjct: 414 KIVYMDRKN----RVNLLDVASGKVSLLLQDPVGVPGGVTFSPDSEWLTYTRMGKNEINV 469

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +Y  ++       +T+  + + S  +S D   ++F S R+   
Sbjct: 470 VYVYNIAEKKEYPVTDKWYNSSSPVFSADGKYLIFSSARDFNP 512


>gi|312199549|ref|YP_004019610.1| serine/threonine protein kinase [Frankia sp. EuI1c]
 gi|311230885|gb|ADP83740.1| serine/threonine protein kinase [Frankia sp. EuI1c]
          Length = 744

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 97/274 (35%), Gaps = 34/274 (12%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +   + Q L  P  SP+++ + Y            +      +  + +   +   L+P
Sbjct: 473 KTIFSDKTQNLQFPVISPDRKTIVYVDNSTGSTTLWAIASDGSGKPVQLLTTGQGANLSP 532

Query: 264 R------FSSNGKRALISVQKDE----AMDIYSVDLQSNATERL-TNTLFINISASYSPD 312
                   S +GK  ++    D+       +Y   +      RL T     +   S+SPD
Sbjct: 533 AADGRPSLSPDGKFLVLRSTTDQTGQPNPGLYISSIDGKTVRRLDTQPEASD--PSWSPD 590

Query: 313 SSQIVFESDR----EGKEQLYVMQSNGSDQKRISQ-------DKEASYFDPVWSPQGDLI 361
             +I + S+      G   + +    G      ++       DK     +P WSP G  +
Sbjct: 591 GERIAYWSNTVAGGGGGFLVLISTIPGQAAVPFNKDEFISEGDKPNLDSEPTWSPDGKYL 650

Query: 362 AFTKF---SGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGR-SLIFSRKKDGDT-- 414
           AF +    +     I ++  +      +  E S    P+WS SG   L+F+  +D     
Sbjct: 651 AFVRQIASNPNDQQIAIVNVNTKHVTAVTGEKSTQDGPSWSASGSDLLLFTANRDPSHPD 710

Query: 415 GSKLYSID---LNGRNETLINTPAYASDPQWVGF 445
             +L+  D   L+  +  L +     + P+W   
Sbjct: 711 DRQLFMTDQRNLDAADRQLTDGRGDFAFPRWSAL 744



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 58/168 (34%), Gaps = 28/168 (16%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSD--QKRISQDKEAS-----YFDPVWSPQGD 359
              SPD   IV+  +  G   L+ + S+GS    + ++  + A+        P  SP G 
Sbjct: 486 PVISPDRKTIVYVDNSTGSTTLWAIASDGSGKPVQLLTTGQGANLSPAADGRPSLSPDGK 545

Query: 360 LIAFTKFSGE----KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK-DGDT 414
            +     + +       + +   DG   R L        P+WSP G  + +      G  
Sbjct: 546 FLVLRSTTDQTGQPNPGLYISSIDGKTVRRLDTQPEASDPSWSPDGERIAYWSNTVAGGG 605

Query: 415 GSKLYSIDL----------------NGRNETLINTPAYASDPQWVGFM 446
           G  L  I                   G    L + P ++ D +++ F+
Sbjct: 606 GGFLVLISTIPGQAAVPFNKDEFISEGDKPNLDSEPTWSPDGKYLAFV 653


>gi|265764053|ref|ZP_06092621.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263256661|gb|EEZ28007.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 1077

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 74/202 (36%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y V       +RLT+ +   +   +SPD   I F    +G  +
Sbjct: 34  NGNEIVFSYAGD----LYKVPASGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGNTE 89

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKF--AIG 374
           +Y M + G +  RI+       D       P      W+P G  I +     + F   + 
Sbjct: 90  VYTMPATGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGKLF 149

Query: 375 VMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSID- 422
            + K+G   +   L E       ++SP G+ L ++R            G     ++  + 
Sbjct: 150 TVDKEGGLSEVIPLPEGGFC---SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNP 206

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            N   E + N  A    P W+G
Sbjct: 207 GNKTVENVTNNVAQDIFPMWIG 228



 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 138/342 (40%), Gaps = 26/342 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKK-FFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            +   +R+  EFR W             +     +   + + ++ DI+    G++  F S
Sbjct: 176 KQLAYNRVMREFRTWKYYKGGMADDIWVYNPGNKTVENVTNNVAQDIFPMWIGDEIFFLS 235

Query: 176 -RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   ++    +   K ++ V +    ++++ +   + I+FE     N   +        
Sbjct: 236 DRDRIMNIFAYNTKTKQTVKVTNFTEYDVKFPSVHGNTIVFE-----NGGYIYKMDAVAR 290

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +V +     +   +  +    + + A   S +G R +++ +     +++++ ++   
Sbjct: 291 KAEKVNITLASDNIYARTDLKEGANYVTAASLSPDGVRMVVTSRG----EVFNLPVEKGV 346

Query: 294 TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ +T +    +  A +SPD +QI + SD  G+ +LY+  + G +  + +   +    D 
Sbjct: 347 TKNITRSPGAHDRDAQWSPDGTQIAYISDATGETELYLQNAAGGEPMQFTHKNDTYIRDF 406

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            WSP    I +         + ++     +  LL++D        T+SP    L ++R  
Sbjct: 407 KWSPDSKKIVYMDRKN---RVNLLDVASGKVSLLLQDPVGVPGGVTFSPDSEWLTYTRM- 462

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
             +  + +Y  ++  + E  +        +P +++D +++ F
Sbjct: 463 GKNEINVVYVYNIAEKKEYPVTDKWYNSSSPVFSADGKYLIF 504



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 76/216 (35%), Gaps = 37/216 (17%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N  ++ ++     D+ +V           +R+ +     + PRFS +GK    + Q D  
Sbjct: 34  NGNEIVFSY--AGDLYKV----PASGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGN 87

Query: 282 MDIYSVDLQSNATERLT-------NTLFINISA-----SYSPDSSQIVFESD-REG-KEQ 327
            ++Y++        R+T       + L   +       +++PD  +IV+ +   +G   +
Sbjct: 88  TEVYTMPATGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGK 147

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFAIGVM 376
           L+ +   G   + I   +        +SP G  +A+ +             G    I V 
Sbjct: 148 LFTVDKEGGLSEVIPLPEGGF---CSYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVY 204

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
                    +  + +    P W   G  + F   +D
Sbjct: 205 NPGNKTVENVTNNVAQDIFPMWI--GDEIFFLSDRD 238



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 93/268 (34%), Gaps = 43/268 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   + LT S       PRFSP+ + +A+    D +   VY M       P 
Sbjct: 45  DLYKVPASGGEAQRLT-SHVGYEMFPRFSPDGKTIAFTGQYDGNT-EVYTM-PATGGEPL 101

Query: 252 RIG------------NFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERL 297
           RI                   +   ++ +G+R +    +    +  +++VD +   +E +
Sbjct: 102 RITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGKLFTVDKEGGLSEVI 161

Query: 298 TNTLFINISASYSPDSSQIVFES----DREGK-------EQLYVMQSNGSDQKRISQDKE 346
                     SYSPD  Q+ +       R  K       + ++V        + ++ +  
Sbjct: 162 PLPEG--GFCSYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNPGNKTVENVTNNVA 219

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
              F P+W   GD I F         I        Q   +    + +++ P+    G ++
Sbjct: 220 QDIF-PMW--IGDEIFFLSDRDRIMNIFAYNTKTKQTVKVTNFTEYDVKFPSVH--GNTI 274

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +F      + G  +Y +D   R    +N
Sbjct: 275 VF------ENGGYIYKMDAVARKAEKVN 296



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 83/223 (37%), Gaps = 26/223 (11%)

Query: 107 GAQVLVTGRVIKEGKDRLRV--EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           GA  +    +  +G  R+ V     ++++   K +      S  A  R            
Sbjct: 313 GANYVTAASLSPDGV-RMVVTSRGEVFNLPVEKGVTKNITRSPGAHDRDA---------- 361

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                  D  ++I ++S++      +  L + +  G      T   D  + + ++SP+ +
Sbjct: 362 ---QWSPDG-TQIAYISDATG----ETELYLQNAAGGEPMQFTHKNDTYIRDFKWSPDSK 413

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMD 283
           K+ Y    +    RV L+D    +    + +   +     FS + +    + + K+E   
Sbjct: 414 KIVYMDRKN----RVNLLDVASGKVSLLLQDPVGVPGGVTFSPDSEWLTYTRMGKNEINV 469

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +Y  ++       +T+  + + S  +S D   ++F S R+   
Sbjct: 470 VYVYNIAEKKEYPVTDKWYNSSSPVFSADGKYLIFSSARDFNP 512


>gi|226228072|ref|YP_002762178.1| hypothetical protein GAU_2666 [Gemmatimonas aurantiaca T-27]
 gi|226091263|dbj|BAH39708.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 1174

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 25/206 (12%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           ++   S +G++ +  +  D    +Y++ +      RLT+ +  +    +SPD  ++VF S
Sbjct: 61  MSVDVSPDGQQLIFDLLGD----LYTLPIGGGKATRLTSGMAYDAQPRFSPDGKKVVFVS 116

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKK 378
           DR G E +++M  +  D  ++++     Y  P + P G  +  ++  G      + +   
Sbjct: 117 DRSGGENVWLMSLDQKDTTQLTRGNNNMYVSPEFDPDGKYVIVSRGGGLGGAAKLWMYHV 176

Query: 379 DGSQERLLV------EDSNLQAPTWSPSGRSLIFSRKKDG------DTGSKLYSIDLNGR 426
           DG     L                +   GR L ++ +             +L   D    
Sbjct: 177 DGGNGVPLSILPAPAATQKQLGAAFGAGGRYLWYATRTGDWQYNAIGPQYQLAVWDRETG 236

Query: 427 NETLINT-------PAYASDPQWVGF 445
             + + T       PA + D  W+ +
Sbjct: 237 RASQMTTRFGSGARPALSPDGTWLVY 262



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 80/215 (37%), Gaps = 22/215 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ Q++ +      D+L              R+ +  +    PRFS +GK+ +    + 
Sbjct: 66  SPDGQQLIF------DLLGDLYTLPIGGGKATRLTSGMAYDAQPRFSPDGKKVVFVSDRS 119

Query: 280 EAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKE--QLYVMQSNGS 336
              +++ + L    T +LT       +S  + PD   ++           +L++   +G 
Sbjct: 120 GGENVWLMSLDQKDTTQLTRGNNNMYVSPEFDPDGKYVIVSRGGGLGGAAKLWMYHVDGG 179

Query: 337 DQKRISQDKEASYF----DPVWSPQGDLIAFTKFSGE--------KFAIGVMKKDGSQER 384
           +   +S     +         +   G  + +   +G+        ++ + V  ++  +  
Sbjct: 180 NGVPLSILPAPAATQKQLGAAFGAGGRYLWYATRTGDWQYNAIGPQYQLAVWDRETGRAS 239

Query: 385 LLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKL 418
            +       A P  SP G  L+++ + +  TG ++
Sbjct: 240 QMTTRFGSGARPALSPDGTWLVYATRFETKTGLRI 274



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 92/266 (34%), Gaps = 37/266 (13%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G        S      +PRFSP+ +KV + + D      V+LM        +      +M
Sbjct: 86  GGGKATRLTSGMAYDAQPRFSPDGKKVVFVS-DRSGGENVWLMSLDQKDTTQLTRGNNNM 144

Query: 260 ILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFI-----NISASYSPD 312
            ++P F  +GK  ++S       A  ++   +       L+           + A++   
Sbjct: 145 YVSPEFDPDGKYVIVSRGGGLGGAAKLWMYHVDGGNGVPLSILPAPAATQKQLGAAFGAG 204

Query: 313 SSQIVFESDREG---------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              + +   R G         + QL V         +++  +  S   P  SP G  + +
Sbjct: 205 GRYLWYA-TRTGDWQYNAIGPQYQLAVWDRETGRASQMTT-RFGSGARPALSPDGTWLVY 262

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-----EDSNLQAP-------TWSPSGRSLIFSRKKD 411
                 K  + +      QE  L      +D   +AP       +++P  ++++ S    
Sbjct: 263 ATRFETKTGLRIRNLQTQQEEWLAFPVQRDDMESRAPMDAYPGYSFTPDSKAIVVSY--- 319

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYA 437
              G +L+ + ++  N T I   A  
Sbjct: 320 ---GGELWRVPVDRTNPTKIPFEAEV 342



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 50/358 (13%), Positives = 101/358 (28%), Gaps = 95/358 (26%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           +++FVS+         ++ +M  D  +   LT   + +   P F P+ + V  +      
Sbjct: 111 KVVFVSDRSGG----ENVWLMSLDQKDTTQLTRGNNNMYVSPEFDPDGKYVIVSRGGGLG 166

Query: 236 ILRVYLMDTRIDRAPKRIGNFRS-----MILAPRFSSNGKRALISVQKDEA--------M 282
                 M          +    +       L   F + G+    + +  +          
Sbjct: 167 GAAKLWMYHVDGGNGVPLSILPAPAATQKQLGAAFGAGGRYLWYATRTGDWQYNAIGPQY 226

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +   D ++    ++T         + SPD + +V+ +  E K  L +       ++ ++
Sbjct: 227 QLAVWDRETGRASQMTTRFGSGARPALSPDGTWLVYATRFETKTGLRIRNLQTQQEEWLA 286

Query: 343 QDKEAS----------YFDPVWSPQGDLIAFTKFSGEKFAIGV----------------- 375
              +            Y    ++P    I    + GE + + V                 
Sbjct: 287 FPVQRDDMESRAPMDAYPGYSFTPDSKAIV-VSYGGELWRVPVDRTNPTKIPFEAEVKLE 345

Query: 376 --------------------------MKKDGSQE------RLLVEDSNLQAPT------- 396
                                        DG Q       R+   +     P        
Sbjct: 346 MGPEVKFAYKIDTATTFTSRQIRDVQPSPDGKQLAFVALDRVWTMNVADNKPARVSNATV 405

Query: 397 ------WSPSGRSLIFSRKKDGDTGSKLYSIDLNG----RNETLINTPAYASDPQWVG 444
                 WSP G+SL +   +D   G ++   D++G    R  TL       +D  W  
Sbjct: 406 GEFSPVWSPDGKSLAYVTWEDSRGG-QIMRADVDGTRGWRTRTLSTIGGLYTDLAWAP 462



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 69/193 (35%), Gaps = 28/193 (14%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y +DT      ++I + +        S +GK+            ++++++  N   R++N
Sbjct: 354 YKIDTATTFTSRQIRDVQP-------SPDGKQLAFVA----LDRVWTMNVADNKPARVSN 402

Query: 300 TLFINISASYSPDSSQIVFESDREGK-EQLYVMQSNGSD--QKRISQDKEASYFDPVWSP 356
                 S  +SPD   + + +  + +  Q+     +G+   + R        Y D  W+P
Sbjct: 403 ATVGEFSPVWSPDGKSLAYVTWEDSRGGQIMRADVDGTRGWRTRTLSTIGGLYTDLAWAP 462

Query: 357 QGDLIAFTKFSGEKFA-------------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
            G+ I  T+ +  +               +  +   G    L++    +  P ++     
Sbjct: 463 TGNRIVATRAAAREVQEAGAAFFGPAAADLVWIPATGGASTLIMPAGGINTPHFTKDSTR 522

Query: 404 LIFSRKKDGDTGS 416
           + F+    G   S
Sbjct: 523 I-FAYSGGGGLQS 534



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 67/197 (34%), Gaps = 30/197 (15%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
               SR     +P  SP+ +++A+   D     RV+ M+   D  P R+ N      +P 
Sbjct: 360 TTFTSRQIRDVQP--SPDGKQLAFVALD-----RVWTMNV-ADNKPARVSNATVGEFSPV 411

Query: 265 FSSNGKRALISVQKD-EAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFES 320
           +S +GK       +D     I   D+      R   L+    +    +++P  ++IV   
Sbjct: 412 WSPDGKSLAYVTWEDSRGGQIMRADVDGTRGWRTRTLSTIGGLYTDLAWAPTGNRIVATR 471

Query: 321 DREGKEQ-------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
               + Q             L  + + G     I      +   P ++     I F    
Sbjct: 472 AAAREVQEAGAAFFGPAAADLVWIPATGGASTLIMPAGGIN--TPHFTKDSTRI-FAYSG 528

Query: 368 GEKFAIGVMKKDGSQER 384
           G    +   + DG+  +
Sbjct: 529 GGG--LQSFRWDGTDLK 543


>gi|301163435|emb|CBW22986.1| putative exported tricorn protease [Bacteroides fragilis 638R]
          Length = 1077

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 74/202 (36%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y V       +RLT+ +   +   +SPD   I F    +G  +
Sbjct: 34  NGNEIVFSYAGD----LYKVPASGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGNTE 89

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKF--AIG 374
           +Y M + G +  RI+       D       P      W+P G  I +     + F   + 
Sbjct: 90  VYTMPATGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGKLF 149

Query: 375 VMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSID- 422
            + K+G   +   L E       ++SP G+ L ++R            G     ++  + 
Sbjct: 150 TVDKEGGLSEVIPLPEGGFC---SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNP 206

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            N   E + N  A    P W+G
Sbjct: 207 GNKTVENVTNNVAQDIFPMWIG 228



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 139/342 (40%), Gaps = 26/342 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKK-FFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            +   +R+  EFR W             +     +   + + ++ DI+    G++  F S
Sbjct: 176 KQLAYNRVMREFRTWKYYKGGMADDIWVYNPGNKTVENVTNNVAQDIFPMWIGDEIFFLS 235

Query: 176 -RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   ++    +   K ++ V +    ++++ +   + I+FE     N   +        
Sbjct: 236 DRDRIMNIFAYNTKTKQTVKVTNFTEYDVKFPSVHGNTIVFE-----NGGYIYKMDAVAR 290

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +V +     +   +  +    + + A   S +G R +++ +     +++++ ++   
Sbjct: 291 KAEKVNITLASDNIYARTDLKEGANYVTAASLSPDGVRMVVTSRG----EVFNLPVEKGV 346

Query: 294 TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ +T +    +  A +SPD +QI + SD  G+ +LY+  + G +  +++   +    D 
Sbjct: 347 TKNITRSPGAHDRDAQWSPDGTQIAYISDATGETELYLQNAAGGEPMQLTHKNDTYIRDF 406

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            WSP    I +         + ++     +  LL++D        T+SP    L ++R  
Sbjct: 407 KWSPDSKKIVYMDRKN---RVNLLDVASGKVSLLLQDPVGVPGGVTFSPDSEWLTYTRM- 462

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
             +  + +Y  ++  + E  +        +P +++D +++ F
Sbjct: 463 GKNEINVVYVYNIAEKKEYPVTDKWYNSSSPVFSADGKYLIF 504



 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 88/256 (34%), Gaps = 13/256 (5%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  + S+ G    F +         V+   +     +  D    R         +     
Sbjct: 263 DVKFPSVHGNTIVFENGGYIYKMDAVARKAEKVNITLASDNIYARTDLKEGANYVTAASL 322

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  ++   +  +     V+ +            +  +     ++S +G +        
Sbjct: 323 SPDGVRMVVTSRGE-----VFNLPVEKGVTKNITRSPGAHDRDAQWSPDGTQIAYISDAT 377

Query: 280 EAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              ++Y  +       +LT  N  +I     +SPDS +IV+    + K ++ ++      
Sbjct: 378 GETELYLQNAAGGEPMQLTHKNDTYIRDF-KWSPDSKKIVY---MDRKNRVNLLDVASGK 433

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLLVEDS-NLQAP 395
              + QD         +SP  + + +T+    +  +  V      +E  + +   N  +P
Sbjct: 434 VSLLLQDPVGVPGGVTFSPDSEWLTYTRMGKNEINVVYVYNIAEKKEYPVTDKWYNSSSP 493

Query: 396 TWSPSGRSLIFSRKKD 411
            +S  G+ LIFS  +D
Sbjct: 494 VFSADGKYLIFSSARD 509



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 76/216 (35%), Gaps = 37/216 (17%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N  ++ ++     D+ +V           +R+ +     + PRFS +GK    + Q D  
Sbjct: 34  NGNEIVFSY--AGDLYKV----PASGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGN 87

Query: 282 MDIYSVDLQSNATERLT-------NTLFINISA-----SYSPDSSQIVFESD-REG-KEQ 327
            ++Y++        R+T       + L   +       +++PD  +IV+ +   +G   +
Sbjct: 88  TEVYTMPATGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGK 147

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFAIGVM 376
           L+ +   G   + I   +        +SP G  +A+ +             G    I V 
Sbjct: 148 LFTVDKEGGLSEVIPLPEGGF---CSYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVY 204

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
                    +  + +    P W   G  + F   +D
Sbjct: 205 NPGNKTVENVTNNVAQDIFPMWI--GDEIFFLSDRD 238



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 93/268 (34%), Gaps = 43/268 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   + LT S       PRFSP+ + +A+    D +   VY M       P 
Sbjct: 45  DLYKVPASGGEAQRLT-SHVGYEMFPRFSPDGKTIAFTGQYDGNT-EVYTM-PATGGEPL 101

Query: 252 RIG------------NFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERL 297
           RI                   +   ++ +G+R +    +    +  +++VD +   +E +
Sbjct: 102 RITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGKLFTVDKEGGLSEVI 161

Query: 298 TNTLFINISASYSPDSSQIVFES----DREGK-------EQLYVMQSNGSDQKRISQDKE 346
                     SYSPD  Q+ +       R  K       + ++V        + ++ +  
Sbjct: 162 PLPEG--GFCSYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNPGNKTVENVTNNVA 219

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
              F P+W   GD I F         I        Q   +    + +++ P+    G ++
Sbjct: 220 QDIF-PMW--IGDEIFFLSDRDRIMNIFAYNTKTKQTVKVTNFTEYDVKFPSVH--GNTI 274

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +F      + G  +Y +D   R    +N
Sbjct: 275 VF------ENGGYIYKMDAVARKAEKVN 296



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 84/223 (37%), Gaps = 26/223 (11%)

Query: 107 GAQVLVTGRVIKEGKDRLRV--EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           GA  +    +  +G  R+ V     ++++   K +      S  A  R            
Sbjct: 313 GANYVTAASLSPDGV-RMVVTSRGEVFNLPVEKGVTKNITRSPGAHDRDA---------- 361

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                  D  ++I ++S++      +  L + +  G     LT   D  + + ++SP+ +
Sbjct: 362 ---QWSPDG-TQIAYISDATG----ETELYLQNAAGGEPMQLTHKNDTYIRDFKWSPDSK 413

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMD 283
           K+ Y    +    RV L+D    +    + +   +     FS + +    + + K+E   
Sbjct: 414 KIVYMDRKN----RVNLLDVASGKVSLLLQDPVGVPGGVTFSPDSEWLTYTRMGKNEINV 469

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +Y  ++       +T+  + + S  +S D   ++F S R+   
Sbjct: 470 VYVYNIAEKKEYPVTDKWYNSSSPVFSADGKYLIFSSARDFNP 512


>gi|53713728|ref|YP_099720.1| putative protease [Bacteroides fragilis YCH46]
 gi|52216593|dbj|BAD49186.1| putative protease [Bacteroides fragilis YCH46]
          Length = 1077

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 74/202 (36%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y V       +RLT+ +   +   +SPD   I F    +G  +
Sbjct: 34  NGNEIVFSYAGD----LYKVPASGGEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGNTE 89

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKF--AIG 374
           +Y M + G +  RI+       D       P      W+P G  I +     + F   + 
Sbjct: 90  VYTMPATGGEPLRITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGKLF 149

Query: 375 VMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSID- 422
            + K+G   +   L E       ++SP G+ L ++R            G     ++  + 
Sbjct: 150 TVDKEGGLSEVIPLPEGGFC---SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNP 206

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            N   E + N  A    P W+G
Sbjct: 207 GNKTVENVTNNVAQDIFPMWIG 228



 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 138/342 (40%), Gaps = 26/342 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKK-FFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            +   +R+  EFR W             +     +   + + ++ DI+    G++  F S
Sbjct: 176 KQLAYNRVMREFRTWKYYKGGMADDIWVYNPGNKTVENVTNNVAQDIFPMWIGDEIFFLS 235

Query: 176 -RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   ++    +   K ++ V +    ++++ +   + I+FE     N   +        
Sbjct: 236 DRDRIMNIFAYNTKTKQTVKVTNFTEYDVKFPSVHGNTIVFE-----NGGYIYKMDAAAR 290

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +V +     +   +  +    + + A   S +G R +++ +     +++++ ++   
Sbjct: 291 KAEKVNITLASDNIYARTDLKEGANYVTAASLSPDGARMVVTSRG----EVFNLPVEKGV 346

Query: 294 TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ +T +    +  A +SPD +QI + SD  G+ +LY+  + G +  + +   +    D 
Sbjct: 347 TKNITRSPGAHDRDAQWSPDGTQIAYISDATGETELYLQNAAGGEPMQFTHKNDTYIRDF 406

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            WSP    I +         + ++     +  LL++D        T+SP    L ++R  
Sbjct: 407 KWSPDSKKIVYMDRKN---RVNLLDVASGKVSLLLQDPVGVPGGVTFSPDSEWLTYTRM- 462

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
             +  + +Y  ++  + E  +        +P +++D +++ F
Sbjct: 463 GKNEINVVYVYNIAEKKEYPVTDKWYNSSSPVFSADGKYLIF 504



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 86/250 (34%), Gaps = 39/250 (15%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  L +    GA +        ++L  P    N  ++ ++     D+ +V        
Sbjct: 2   NKKLILSIFVLAGAPVLLSAAGEARLLRFPA--TNGNEIVFSY--AGDLYKV----PASG 53

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-------NT 300
              +R+ +     + PRFS +GK    + Q D   ++Y++        R+T       + 
Sbjct: 54  GEAQRLTSHVGYEMFPRFSPDGKTIAFTGQYDGNTEVYTMPATGGEPLRITYTATNSRDD 113

Query: 301 LFINISA-----SYSPDSSQIVFESD-REG-KEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           L   +       +++PD  +IV+ +   +G   +L+ +   G   + I   +        
Sbjct: 114 LGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGKLFTVDKEGGLSEVIPLPEGGF---CS 170

Query: 354 WSPQGDLIAFTKF-----------SGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSG 401
           +SP G  +A+ +             G    I V          +  + +    P W   G
Sbjct: 171 YSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNPGNKTVENVTNNVAQDIFPMWI--G 228

Query: 402 RSLIFSRKKD 411
             + F   +D
Sbjct: 229 DEIFFLSDRD 238



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 93/268 (34%), Gaps = 43/268 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   + LT S       PRFSP+ + +A+    D +   VY M       P 
Sbjct: 45  DLYKVPASGGEAQRLT-SHVGYEMFPRFSPDGKTIAFTGQYDGNT-EVYTM-PATGGEPL 101

Query: 252 RIG------------NFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERL 297
           RI                   +   ++ +G+R +    +    +  +++VD +   +E +
Sbjct: 102 RITYTATNSRDDLGDRMGPNNIVMTWTPDGQRIVYRNRISDGFSGKLFTVDKEGGLSEVI 161

Query: 298 TNTLFINISASYSPDSSQIVFES----DREGK-------EQLYVMQSNGSDQKRISQDKE 346
                     SYSPD  Q+ +       R  K       + ++V        + ++ +  
Sbjct: 162 PLPEG--GFCSYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWVYNPGNKTVENVTNNVA 219

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
              F P+W   GD I F         I        Q   +    + +++ P+    G ++
Sbjct: 220 QDIF-PMW--IGDEIFFLSDRDRIMNIFAYNTKTKQTVKVTNFTEYDVKFPSVH--GNTI 274

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +F      + G  +Y +D   R    +N
Sbjct: 275 VF------ENGGYIYKMDAAARKAEKVN 296



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 83/223 (37%), Gaps = 26/223 (11%)

Query: 107 GAQVLVTGRVIKEGKDRLRV--EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           GA  +    +  +G  R+ V     ++++   K +      S  A  R            
Sbjct: 313 GANYVTAASLSPDGA-RMVVTSRGEVFNLPVEKGVTKNITRSPGAHDRDA---------- 361

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                  D  ++I ++S++      +  L + +  G      T   D  + + ++SP+ +
Sbjct: 362 ---QWSPDG-TQIAYISDATG----ETELYLQNAAGGEPMQFTHKNDTYIRDFKWSPDSK 413

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMD 283
           K+ Y    +    RV L+D    +    + +   +     FS + +    + + K+E   
Sbjct: 414 KIVYMDRKN----RVNLLDVASGKVSLLLQDPVGVPGGVTFSPDSEWLTYTRMGKNEINV 469

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +Y  ++       +T+  + + S  +S D   ++F S R+   
Sbjct: 470 VYVYNIAEKKEYPVTDKWYNSSSPVFSADGKYLIFSSARDFNP 512


>gi|289662098|ref|ZP_06483679.1| hypothetical protein XcampvN_03108 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 784

 Score =  117 bits (292), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 11/231 (4%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--RSM 259
               +  +       P  SP+   VAYA+   +      L+ T  +  P+ +      S 
Sbjct: 221 RPYQVITAGGGFDLTPSLSPDGAMVAYASLTGDRAGTSILVKTTDNAYPRVLETPAPGSS 280

Query: 260 ILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQI 316
              P +S +G+    S Q +D    +        A  R          +S S+SPD   +
Sbjct: 281 DRLPAWSPDGREIAFSRQARDGVCRVMIAAATGPAAAREVARCDAADMLSFSWSPDGRAL 340

Query: 317 VFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFA 372
           VF S     G  +L  +       + +    +AS FD  P +SP G  I F +       
Sbjct: 341 VFGSMTGTHGAARLRRLDLETGQWQTLDYSAQASDFDYAPRYSPDGHWIVFVRNPQLGDL 400

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +  + G+ ERL  ++++++  +W P G  LIF R+ D +  ++LY +DL
Sbjct: 401 WRIPAQGGAAERLTHDNADIRGWSWLPDGSGLIFGRRVDSE--ARLYRLDL 449



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 84/265 (31%), Gaps = 50/265 (18%)

Query: 218 RFSPNQQKVAYATYDDEDI---LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            +SP+ + + + +         LR   ++T   +             APR+S +G   + 
Sbjct: 332 SWSPDGRALVFGSMTGTHGAARLRRLDLETGQWQTLDYSAQASDFDYAPRYSPDGHWIVF 391

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS- 333
            V+  +  D++ +  Q  A ERLT+        S+ PD S ++F    + + +LY +   
Sbjct: 392 -VRNPQLGDLWRIPAQGGAAERLTHDNADIRGWSWLPDGSGLIFGRRVDSEARLYRLDLI 450

Query: 334 -----------------------------------------NGSDQKRISQDKEASYFDP 352
                                                    NG   +R           P
Sbjct: 451 DSSLHDLGVDDAQAPDVAHGHLVFVQRKPQFGMYQVIHDSMNGGYIRRRLFPSSGRDDQP 510

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRK 409
           + +P G  + F       + +       S    L+E     + QA  WS   + ++    
Sbjct: 511 MIAPDGHQLIFASNRSGTYGLWWGDVSKSSSVRLIEGLRPDSRQAADWSADSQRVL-VSG 569

Query: 410 KDGDTGSKLYSIDLNGRNETLINTP 434
            D +  + L+ +  +      +  P
Sbjct: 570 SDANGHAALFEVTPSTGKVVRLAVP 594



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 21/176 (11%)

Query: 292 NATER----LTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQD 344
            + +R    +T     +++ S SPD + + + S   DR G   L     N   +   +  
Sbjct: 217 GSPKRPYQVITAGGGFDLTPSLSPDGAMVAYASLTGDRAGTSILVKTTDNAYPRVLETPA 276

Query: 345 KEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPS 400
             +S   P WSP G  IAF++        + +    G      V   + +++ + +WSP 
Sbjct: 277 PGSSDRLPAWSPDGREIAFSRQARDGVCRVMIAAATGPAAAREVARCDAADMLSFSWSPD 336

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT---------PAYASDPQWVGFM 446
           GR+L+F         ++L  +DL  G+ +TL  +         P Y+ D  W+ F+
Sbjct: 337 GRALVFGSMTGTHGAARLRRLDLETGQWQTLDYSAQASDFDYAPRYSPDGHWIVFV 392



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 72/256 (28%), Gaps = 50/256 (19%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-ED 235
           ++F S +   G  +     ++         +       + PR+SP+   + +       D
Sbjct: 340 LVFGSMTGTHGAARLRRLDLETGQWQTLDYSAQASDFDYAPRYSPDGHWIVFVRNPQLGD 399

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL------ 289
           + R+       +R      + R       +  +G   +   + D    +Y +DL      
Sbjct: 400 LWRIPAQGGAAERLTHDNADIRGW----SWLPDGSGLIFGRRVDSEARLYRLDLIDSSLH 455

Query: 290 -------------------------------------QSNATERLTNTLFINISASYSPD 312
                                                      RL  +   +     +PD
Sbjct: 456 DLGVDDAQAPDVAHGHLVFVQRKPQFGMYQVIHDSMNGGYIRRRLFPSSGRDDQPMIAPD 515

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFT-KFSGEK 370
             Q++F S+R G   L+    + S   R+ +  +  S     WS     +  +   +   
Sbjct: 516 GHQLIFASNRSGTYGLWWGDVSKSSSVRLIEGLRPDSRQAADWSADSQRVLVSGSDANGH 575

Query: 371 FAIGVMKKDGSQERLL 386
            A+  +     +   L
Sbjct: 576 AALFEVTPSTGKVVRL 591


>gi|170725571|ref|YP_001759597.1| winged helix family two component response transcriptional
           regulator [Shewanella woodyi ATCC 51908]
 gi|169810918|gb|ACA85502.1| putative two component transcriptional regulator, winged helix
           family [Shewanella woodyi ATCC 51908]
          Length = 714

 Score =  117 bits (292), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 69/384 (17%), Positives = 132/384 (34%), Gaps = 75/384 (19%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           LV G   K      R    L D+    +   +   +  + +R + H  +  +Y       
Sbjct: 200 LVYGSRSKNK----RTSLYLKDLLKPTETPKRLTSTKTSEYRAVWHPDAGALY------- 248

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
                   + SE       K SL V++ D +N      +          SP+   +AY  
Sbjct: 249 --------YPSEQ----KGKCSLTVLNLD-SNEATKLGACYSDTAAIDISPDGSSLAYIW 295

Query: 231 YD-DEDILRVYLMDTRI-DRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDE-AMDI 284
            + +     +Y ++ +  D  P R+    N  S      FS +G+   I+ +    + DI
Sbjct: 296 NEGNGHHSGIYQLNLKDKDAEPVRLSCAENCGSRDRDMTFSPDGRWLAIARRFGNISEDI 355

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D+++    RLT  L      S+  D+ +++F ++  G    Y++  +  +   +  +
Sbjct: 356 FIRDIETGKETRLTFGLEDIRGLSWHQDNERVIFSTENSGVRNGYIVGIDDKEIHSLEVE 415

Query: 345 K-------------------------------------------EASYFDPVWSPQGDLI 361
                                                       E SY +P +S     I
Sbjct: 416 GMSYPRSIPNSNELVYSNYMRDYQIASFALEQSIPTATFPLLQVEYSYRNPDYSAAAKRI 475

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +         I   + DG   R   +    +  P+WS  G  + F    D + G+K++ 
Sbjct: 476 VYVSNETGFNEIWSSELDGGARRQHTDLKRRVAYPSWSHDGTKVAFLAPDDKNEGNKIHV 535

Query: 421 IDLNGRNETLINTPA-YASDPQWV 443
           +D+N  N +++ TP    + P W 
Sbjct: 536 LDINTSNISILATPYLDHNRPSWG 559



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 86/233 (36%), Gaps = 17/233 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMIL 261
            R    S       P  SP+ + + Y +        +YL D  +    PKR+ + ++   
Sbjct: 177 ERQQLTSAAGAELYPAVSPDGRWLVYGSRSKNKRTSLYLKDLLKPTETPKRLTSTKTSEY 236

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISASYSPDSSQIV 317
              +  +        ++     +  ++L SN   +L    ++T  I+I    SPD S + 
Sbjct: 237 RAVWHPDAGALYYPSEQKGKCSLTVLNLDSNEATKLGACYSDTAAIDI----SPDGSSLA 292

Query: 318 FESDREGKEQ--LYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +  +        +Y +     D + +    +++  +   D  +SP G  +A  +  G   
Sbjct: 293 YIWNEGNGHHSGIYQLNLKDKDAEPVRLSCAENCGSRDRDMTFSPDGRWLAIARRFGNIS 352

Query: 372 A-IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             I +   +  +E  L     +++  +W      +IFS +  G     +  ID
Sbjct: 353 EDIFIRDIETGKETRLTFGLEDIRGLSWHQDNERVIFSTENSGVRNGYIVGID 405



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 68/189 (35%), Gaps = 17/189 (8%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYV 330
            +  +         S+       ++LT+     +  + SPD   +V+ S  +  +  LY+
Sbjct: 156 IVFCLFSVFHFYQDSIRYSPTERQQLTSAAGAELYPAVSPDGRWLVYGSRSKNKRTSLYL 215

Query: 331 MQS--NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                     KR++  K + Y   VW P    + +      K ++ V+  D ++   L  
Sbjct: 216 KDLLKPTETPKRLTSTKTSEYRA-VWHPDAGALYYPSEQKGKCSLTVLNLDSNEATKLGA 274

Query: 389 DSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP------------A 435
             +  A    SP G SL +   +     S +Y ++L  ++   +                
Sbjct: 275 CYSDTAAIDISPDGSSLAYIWNEGNGHHSGIYQLNLKDKDAEPVRLSCAENCGSRDRDMT 334

Query: 436 YASDPQWVG 444
           ++ D +W+ 
Sbjct: 335 FSPDGRWLA 343



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 85/216 (39%), Gaps = 25/216 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y     +      RI++VS         N +   + DG   R       + +  P +S +
Sbjct: 461 YSYRNPDYSAAAKRIVYVSNETG----FNEIWSSELDGG-ARRQHTDLKRRVAYPSWSHD 515

Query: 223 QQKVAYATYDDED-ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG--KRALISVQKD 279
             KVA+   DD++   +++++D            +      P +   G     +++   D
Sbjct: 516 GTKVAFLAPDDKNEGNKIHVLDINTSNISILATPYLDHNR-PSW---GWKDEMVLAKTDD 571

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQ 338
              + Y   L +   + +     IN+      D+ ++VF    R+G   L+++    S+ 
Sbjct: 572 GITEFY---LDNRLPKVI---SSINMRLGKMIDADKLVFTQYSRKG---LWMLSL--SEP 620

Query: 339 KRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKFAI 373
           + +SQ  E+ YFD  ++    D   + + SG ++ +
Sbjct: 621 EAVSQIIESKYFDEGYNWVATDKGVYFRESGSRYQL 656


>gi|262196214|ref|YP_003267423.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262079561|gb|ACY15530.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1267

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 58/268 (21%), Positives = 114/268 (42%), Gaps = 27/268 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ +   DG+    +    D  + + RFSP+ + +  A+ D      V L    
Sbjct: 949  SSSEDRTVRIWHADGSGQPRILSGHDAAVMDVRFSPDGRYIVSASGDA----SVRLWKAV 1004

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
             D  P  +     ++ +  FS +G+R ++S  +D+ + ++  D+ S +    L       
Sbjct: 1005 RDAEPLVLRGHEHVVTSADFSPDGRR-VVSTSEDQTVRVW--DVASRSEPLVLRGHEESV 1061

Query: 305  ISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +SA++SPD ++IV  S DR     + V  ++GS +  +     +  +  V+SP G  IA 
Sbjct: 1062 MSAAFSPDGTRIVSASCDRT----VRVWNADGSGEPLVLYGHGSRVWSAVFSPDGRRIAS 1117

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +      + V   DGS   L++           +SP G  ++ + K   D   +++  
Sbjct: 1118 GSWDRT---VRVWNADGSGTALILSGHEDWVSEAEFSPDGAYIVSASK---DRTVRVWRA 1171

Query: 422  DLNGRNETL------INTPAYASDPQWV 443
            D +G    L      +N   ++ + +WV
Sbjct: 1172 DGSGGAVVLGGHSLWVNGAHFSPNGEWV 1199



 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 53/272 (19%), Positives = 111/272 (40%), Gaps = 21/272 (7%)

Query: 153  KIAHTISDDIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            +  H +  D+  ++     +  S + F  +   +VSG    ++ ++  DG          
Sbjct: 746  EAKHLLHADVASAVWTPHDNVVSTVAFSPDGTRLVSGSWDGTVRMLRTDGDGTSVTVGDH 805

Query: 211  DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             + +     SP+  +VA A+ D      V +     D  P  +     ++ +  FS +G 
Sbjct: 806  GERVKSVALSPDGMRVASASTD----WSVRIWRVNGDAPPVVLRGHDGVVRSAVFSPDGS 861

Query: 271  RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLY 329
            + + S   D  + ++  +   +    + +     ++A  +SPD  +IV  SD +   +++
Sbjct: 862  KIV-SASDDRTVRVW--NADGSGEPLVFHGHSDVVTAVDFSPDGRRIV-SSDWDRTVRVW 917

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLV- 387
               ++GS    + +   A+     +SP G  IA +    E   + +   DG  Q R+L  
Sbjct: 918  --NADGSGTPMVLRGHTAAVTSVHFSPDGRFIASSS---EDRTVRIWHADGSGQPRILSG 972

Query: 388  EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             D+ +    +SP GR ++      GD   +L+
Sbjct: 973  HDAAVMDVRFSPDGRYIV---SASGDASVRLW 1001



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 97/250 (38%), Gaps = 15/250 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              V S     S+ +   +G     +    D ++    FSP+  K+  A+ D      V +
Sbjct: 819  MRVASASTDWSVRIWRVNGDAPPVVLRGHDGVVRSAVFSPDGSKIVSASDDR----TVRV 874

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +      P        ++ A  FS +G+R + S   D  + +++ D  S     L    
Sbjct: 875  WNADGSGEPLVFHGHSDVVTAVDFSPDGRRIV-SSDWDRTVRVWNAD-GSGTPMVLRGHT 932

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S  +SPD   I   S+      + +  ++GS Q RI    +A+  D  +SP G  I
Sbjct: 933  AAVTSVHFSPDGRFIASSSE---DRTVRIWHADGSGQPRILSGHDAAVMDVRFSPDGRYI 989

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +        +    +D     L   +  + +  +SP GR ++ + +   D   +++  
Sbjct: 990  V-SASGDASVRLWKAVRDAEPLVLRGHEHVVTSADFSPDGRRVVSTSE---DQTVRVW-- 1043

Query: 422  DLNGRNETLI 431
            D+  R+E L+
Sbjct: 1044 DVASRSEPLV 1053



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 77/220 (35%), Gaps = 12/220 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG     L    RD   +  +    + ++    FSP+ ++V   + D      V + D  
Sbjct: 993  SGDASVRLWKAVRDAEPL--VLRGHEHVVTSADFSPDGRRVVSTSEDQ----TVRVWDVA 1046

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                P  +      +++  FS +G R + S   D  + +++ D  S     L        
Sbjct: 1047 SRSEPLVLRGHEESVMSAAFSPDGTRIV-SASCDRTVRVWNAD-GSGEPLVLYGHGSRVW 1104

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            SA +SPD  +I   S       + V  ++GS    I    E    +  +SP G  I  + 
Sbjct: 1105 SAVFSPDGRRIASGS---WDRTVRVWNADGSGTALILSGHEDWVSEAEFSPDGAYIV-SA 1160

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                   +      G    L      +    +SP+G  ++
Sbjct: 1161 SKDRTVRVWRADGSGGAVVLGGHSLWVNGAHFSPNGEWVV 1200



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 79/218 (36%), Gaps = 18/218 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              VVS     ++ V D    +   +    ++ +    FSP+  ++  A+ D      V +
Sbjct: 1029 RRVVSTSEDQTVRVWDVASRSEPLVLRGHEESVMSAAFSPDGTRIVSASCDR----TVRV 1084

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +      P  +    S + +  FS +G+R   S   D  + +++ D    A   L+   
Sbjct: 1085 WNADGSGEPLVLYGHGSRVWSAVFSPDGRRIA-SGSWDRTVRVWNADGSGTALI-LSGHE 1142

Query: 302  FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 A +SPD + IV  S DR     + V +++GS    +            +SP G+ 
Sbjct: 1143 DWVSEAEFSPDGAYIVSASKDRT----VRVWRADGSGGAVVLGGHSLWVNGAHFSPNGEW 1198

Query: 361  IAFTKFSGEKFAIG----VMKKDGSQERLLVEDSNLQA 394
            +  +        +     V + D    RL    S   +
Sbjct: 1199 VV-SPSDDRTVRVWRDLSVPRLD--DPRLWTATSYCMS 1233



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 79/246 (32%), Gaps = 45/246 (18%)

Query: 91   ITNPDSIPRFQDWNSL---------GAQVLVTGRVIKEGKDRLRVE------FRLWDVKD 135
            I +       + W ++         G + +VT         R  V        R+WDV  
Sbjct: 989  IVSASGDASVRLWKAVRDAEPLVLRGHEHVVT-SADFSPDGRRVVSTSEDQTVRVWDVAS 1047

Query: 136  RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            R + +  +            H  S  +  +     G            +VS     ++ V
Sbjct: 1048 RSEPLVLR-----------GHEES--VMSAAFSPDG----------TRIVSASCDRTVRV 1084

Query: 196  MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
             + DG+    +       ++   FSP+ +++A  ++D      V + +         +  
Sbjct: 1085 WNADGSGEPLVLYGHGSRVWSAVFSPDGRRIASGSWDR----TVRVWNADGSGTALILSG 1140

Query: 256  FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                +    FS +G   + S  KD  + ++  D    A   L         A +SP+   
Sbjct: 1141 HEDWVSEAEFSPDGAYIV-SASKDRTVRVWRADGSGGAVV-LGGHSLWVNGAHFSPNGEW 1198

Query: 316  IVFESD 321
            +V  SD
Sbjct: 1199 VVSPSD 1204


>gi|294777420|ref|ZP_06742871.1| WD40-like protein [Bacteroides vulgatus PC510]
 gi|294448488|gb|EFG17037.1| WD40-like protein [Bacteroides vulgatus PC510]
          Length = 1084

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 119/334 (35%), Gaps = 41/334 (12%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D ++ K        +     R             ++   G   +   F   S  S   
Sbjct: 200 LYDSENGKH---TNLTAHAGEDRNPVFAPDGQTVYFLSERDGGTFNVYSFPISSPQSLKT 256

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
                V       +R+L+   +  L    ++ + +   Y     +   +V +   R D+ 
Sbjct: 257 -----VTHFKTHPVRFLSMGSNGTLC---YTYDGE--IYTQKQGDKPQKVKIDIIRDDQN 306

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
                NF +   +   S +GK+    V+     +++      N T+++T+T       ++
Sbjct: 307 TIADLNFSNGATSATVSPDGKQVAFIVRG----EVFVTSADYNTTKQITHTPAREAGLTF 362

Query: 310 SPDSSQIVFESDREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWSPQG 358
           SPD+  + + S+R G  +LY+             +   +++ +    +     P +SP G
Sbjct: 363 SPDNRILAYASERNGNWELYMAKIARKEEANFPNATAIEEEVLLPSDKTERTYPQFSPDG 422

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFSRKK 410
             +AF +       + V+  +  + R + + S   +       +WSP G+   L F   +
Sbjct: 423 KELAFIEDRN---RLMVLNLETKKVRQVTDGSTWFSTGGGFDYSWSPDGKWFTLEFIGNR 479

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWV 443
             D  S +  +   G     +    Y +  P+WV
Sbjct: 480 H-DPYSDIGMVSAQGGKIINLTNSGYTSGSPRWV 512



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 72/201 (35%), Gaps = 28/201 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G       + D    IY V        +LT       S  +SPDS QI F SDR G 
Sbjct: 31  SPDGTEIAFCYKGD----IYKVPSNGGTATQLTTQASYECSPIWSPDSKQIAFASDRNGN 86

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----------IG 374
             L+VM ++G   +R++    AS     ++  G+ I F+    +              + 
Sbjct: 87  FDLFVMSADGGAARRLTT-HSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTELY 145

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSIDL- 423
            +   G +   ++     +   +  SG++ ++  +K                 ++  D  
Sbjct: 146 KVPVTGGRTEQVLGTP-AEMVCFDKSGKTFLYQDRKGFEDEWRKHHTSSITRDVWLYDSE 204

Query: 424 NGRNETLINTPAYASDPQWVG 444
           NG++  L        +P +  
Sbjct: 205 NGKHTNLTAHAGEDRNPVFAP 225



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 81/230 (35%), Gaps = 34/230 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S   +P +S + K+   +  +
Sbjct: 30  ISPDGTEIAFCY--KGDIYKV----PSNGGTATQLTTQASYECSPIWSPDSKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
           +   D++ +     A  RLT      I ++++ D + I+F +                 +
Sbjct: 84  NGNFDLFVMSADGGAARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTE 143

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY +   G   +++     A       S  G    +               S     + +
Sbjct: 144 LYKVPVTGGRTEQVL-GTPAEMVCFDKS--GKTFLYQDRKGFEDEWRKHHTSSITRDVWL 200

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +  +   L       + P ++P G+++ F  ++DG T   +YS  ++
Sbjct: 201 YDSENGKHTNLTAHAGEDRNPVFAPDGQTVYFLSERDGGT-FNVYSFPIS 249



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++VA+    +        + +      K+I +  +      FS + +    + +
Sbjct: 321 TVSPDGKQVAFIVRGE------VFVTSADYNTTKQITHTPAREAGLTFSPDNRILAYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN------------ISASYSPDSSQIVFESDREGK 325
           ++   ++Y   +         N   I                 +SPD  ++ F  DR   
Sbjct: 375 RNGNWELYMAKIARKEEANFPNATAIEEEVLLPSDKTERTYPQFSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  IG++  
Sbjct: 432 NRLMVLNLETKKVRQVTDGSTWFSTGGGFDYSWSPDGKWFTLEFIGNRHDPYSDIGMVSA 491

Query: 379 DGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG 412
            G +   L        +P W   G +++F  ++ G
Sbjct: 492 QGGKIINLTNSGYTSGSPRWVLDGNAILFITERYG 526



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 86/254 (33%), Gaps = 32/254 (12%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +  +G     LT         P +SP+ +++A+A+  + +     +  +    
Sbjct: 41  YKGDIYKVPSNGGTATQLTTQAS-YECSPIWSPDSKQIAFASDRNGNFDLFVM--SADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATERL 297
           A +R+    +  +   F+++G   L S    +             ++Y V +    TE++
Sbjct: 98  AARRLTTHSASEIPSTFTTDGNYILFSASIQDPANSALFPTSAMTELYKVPVTGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  S       ++  
Sbjct: 158 LGTPAEMV--CFDKSGKTFLYQ-DRKGFEDEWRKHHTSSITRDVWLYDSENGKHTNLT-A 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                 +PV++P G  + F ++  G  F +        Q    V         +   G +
Sbjct: 214 HAGEDRNPVFAPDGQTVYFLSERDGGTFNVYSFPISSPQSLKTVTHFKTHPVRFLSMGSN 273

Query: 404 LIFSRKKDGDTGSK 417
                  DG+  ++
Sbjct: 274 GTLCYTYDGEIYTQ 287



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            SP G  IAF         I  +  +G     L   ++ + +P WSP  + + F+  ++G
Sbjct: 30  ISPDGTEIAFCYKGD----IYKVPSNGGTATQLTTQASYECSPIWSPDSKQIAFASDRNG 85

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +    L+ +  +G     + T + +  P 
Sbjct: 86  NF--DLFVMSADGGAARRLTTHSASEIPS 112



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 60/357 (16%), Positives = 124/357 (34%), Gaps = 55/357 (15%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEK 170
             V  +GK     V   ++ V        K+   +PA  R+   T S D  I    +   
Sbjct: 320 ATVSPDGKQVAFIVRGEVF-VTSADYNTTKQITHTPA--REAGLTFSPDNRILAYASERN 376

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G++   +  ++    +     +             L PS       P+FSP+ +++A+  
Sbjct: 377 GNWELYMAKIARKEEANFPNATAI-------EEEVLLPSDKTERTYPQFSPDGKELAFI- 428

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRA---LISVQKDEAM 282
              ED  R+ +++    +  +++ +              +S +GK      I  + D   
Sbjct: 429 ---EDRNRLMVLNLET-KKVRQVTDGSTWFSTGGGFDYSWSPDGKWFTLEFIGNRHDPYS 484

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----------QLYVM 331
           DI  V  Q      LTN+ + + S  +  D + I+F ++R G              L  M
Sbjct: 485 DIGMVSAQGGKIINLTNSGYTSGSPRWVLDGNAILFITERYGMRAHASWGSLNDVMLVFM 544

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG----------------EKFAIGV 375
             +  D+ R+S++      +     +    A                      +   + +
Sbjct: 545 NQDAYDKFRLSKEDYELQKELEKEQKNTTEAKKNDKKKGDNKEKSEEKKEEKVKDIVVEL 604

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              +    RL    S+L +   +  G +L +    +G  G  L+ ++L  ++  L++
Sbjct: 605 NNIEDRIVRLTPNSSDLGSAIITKDGETLYYLSAFEG--GYDLWKMNLRKKDTKLLH 659


>gi|289668062|ref|ZP_06489137.1| hypothetical protein XcampmN_06068 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 784

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 55/231 (23%), Positives = 94/231 (40%), Gaps = 11/231 (4%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--RSM 259
               +  +       P  SP+   VAYA+   +      L+ T  +  P+ +      S 
Sbjct: 221 RPYQVITAGGGFDLTPSLSPDGAMVAYASLTGDRAGTSILVKTTDNAYPRVLETPAPGSS 280

Query: 260 ILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQI 316
              P +S +G+    S Q +D    +        A  R          +S S+SPD   +
Sbjct: 281 DRLPAWSPDGREIAFSRQARDGVCRVMIAAATGPAAAREVARCDGADMLSFSWSPDGRAL 340

Query: 317 VFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFA 372
           VF S     G  +L  +       + +    +AS FD  P +SP G  I F +       
Sbjct: 341 VFGSMTGTHGAARLRRLDLETGQWQTLDYSAQASDFDYAPRYSPDGHWIVFVRNPQLGDL 400

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +  + G+ ERL  ++++++  +W P G  LIF R+ D +  ++LY +DL
Sbjct: 401 WRIPAQGGAAERLTHDNADIRGWSWLPDGSGLIFGRRVDSE--ARLYRLDL 449



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 84/265 (31%), Gaps = 50/265 (18%)

Query: 218 RFSPNQQKVAYATYDDEDI---LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            +SP+ + + + +         LR   ++T   +             APR+S +G   + 
Sbjct: 332 SWSPDGRALVFGSMTGTHGAARLRRLDLETGQWQTLDYSAQASDFDYAPRYSPDGHWIVF 391

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS- 333
            V+  +  D++ +  Q  A ERLT+        S+ PD S ++F    + + +LY +   
Sbjct: 392 -VRNPQLGDLWRIPAQGGAAERLTHDNADIRGWSWLPDGSGLIFGRRVDSEARLYRLDLI 450

Query: 334 -----------------------------------------NGSDQKRISQDKEASYFDP 352
                                                    NG   +R           P
Sbjct: 451 DSSLHDLGVDDAQAPDVAHGHLVFVQRKPQFGMYQVIHDSMNGGYIRRRLFPSSGRDDQP 510

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRK 409
           + +P G  + F       + +       S    L+E     + QA  WS   + ++    
Sbjct: 511 MIAPDGHQLIFASNRSGTYGLWWGDVSKSSSVRLIEGLRPDSRQAADWSADSQRVL-VSG 569

Query: 410 KDGDTGSKLYSIDLNGRNETLINTP 434
            D +  + L+ +  +      +  P
Sbjct: 570 SDANGHAALFEVTPSTGKVVRLAVP 594



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 21/176 (11%)

Query: 292 NATER----LTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQD 344
            + +R    +T     +++ S SPD + + + S   DR G   L     N   +   +  
Sbjct: 217 GSPKRPYQVITAGGGFDLTPSLSPDGAMVAYASLTGDRAGTSILVKTTDNAYPRVLETPA 276

Query: 345 KEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPS 400
             +S   P WSP G  IAF++        + +    G      V   + +++ + +WSP 
Sbjct: 277 PGSSDRLPAWSPDGREIAFSRQARDGVCRVMIAAATGPAAAREVARCDGADMLSFSWSPD 336

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT---------PAYASDPQWVGFM 446
           GR+L+F         ++L  +DL  G+ +TL  +         P Y+ D  W+ F+
Sbjct: 337 GRALVFGSMTGTHGAARLRRLDLETGQWQTLDYSAQASDFDYAPRYSPDGHWIVFV 392



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 72/256 (28%), Gaps = 50/256 (19%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-ED 235
           ++F S +   G  +     ++         +       + PR+SP+   + +       D
Sbjct: 340 LVFGSMTGTHGAARLRRLDLETGQWQTLDYSAQASDFDYAPRYSPDGHWIVFVRNPQLGD 399

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL------ 289
           + R+       +R      + R       +  +G   +   + D    +Y +DL      
Sbjct: 400 LWRIPAQGGAAERLTHDNADIRGW----SWLPDGSGLIFGRRVDSEARLYRLDLIDSSLH 455

Query: 290 -------------------------------------QSNATERLTNTLFINISASYSPD 312
                                                      RL  +   +     +PD
Sbjct: 456 DLGVDDAQAPDVAHGHLVFVQRKPQFGMYQVIHDSMNGGYIRRRLFPSSGRDDQPMIAPD 515

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFT-KFSGEK 370
             Q++F S+R G   L+    + S   R+ +  +  S     WS     +  +   +   
Sbjct: 516 GHQLIFASNRSGTYGLWWGDVSKSSSVRLIEGLRPDSRQAADWSADSQRVLVSGSDANGH 575

Query: 371 FAIGVMKKDGSQERLL 386
            A+  +     +   L
Sbjct: 576 AALFEVTPSTGKVVRL 591


>gi|218265119|ref|ZP_03478701.1| hypothetical protein PRABACTJOHN_04411 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221574|gb|EEC94224.1| hypothetical protein PRABACTJOHN_04411 [Parabacteroides johnsonii
           DSM 18315]
          Length = 1079

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 60/342 (17%), Positives = 140/342 (40%), Gaps = 26/342 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKK-FFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            +   +R+  EFR W             +     +   I    + DI     G++  F S
Sbjct: 176 KQLAYNRVMREFRTWKYYKGGMADDIWIYNPDRKTVENITDNPAQDIIPMWIGDEIFFLS 235

Query: 176 -RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   ++  V +   K +  V D    ++++ + + + I+FE     N   +       +
Sbjct: 236 DRDRTMNIFVYNTKTKQTDKVTDFTEYDVKFPSANGNMIVFE-----NGGYIYKMDAGSK 290

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +V +  T  +   +  I +    +     S +G+R +++ +     +++++ ++   
Sbjct: 291 KPEKVNITLTSDNIYARSEIKDGAGYLTEASLSPDGERLVVTARG----EVFNLPVEKGV 346

Query: 294 TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ +T +    +  A +SPD   IV+ SD  G+ +LY+  + G +  ++++D +      
Sbjct: 347 TKNITRSPGAHDRDAQWSPDGKFIVYISDATGETELYMQDATGGEPVQLTKDNDTYIRSF 406

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
             SP    + +T        + ++     Q   L++D     +  T+SP  + L ++R  
Sbjct: 407 ELSPDSKTLVYTDRKN---RVNLLDIATKQVTTLLQDPMGEPRGVTFSPDSKWLTYTRT- 462

Query: 411 DGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
             +  S +Y  +L  R E  +        +P +++D +++ F
Sbjct: 463 GNNEYSIVYVYNLVDRKEYPVTDKWYDSSSPVFSTDGKYLVF 504



 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 75/202 (37%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y V        RLT+ +   +   +SPD   I F    +G  +
Sbjct: 34  NGNEIVFSYAGD----LYKVPATGGEAGRLTSHVGYEMFPRFSPDGKTIAFTGQYDGNTE 89

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKF--AIG 374
           +Y M   G +  R++       D       P      W+P G  I +     + F   + 
Sbjct: 90  VYTMPVTGGEPLRVTYTATNSRDDLGDRMGPNNIVMTWTPDGSRIVYRNRISDGFSGKLF 149

Query: 375 VMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSIDL 423
            ++K+G   +   L E       ++SP G+ L ++R            G     ++  + 
Sbjct: 150 TVEKEGGLSEVIPLPEGGFC---SYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWIYNP 206

Query: 424 NGRN-ETLINTPAYASDPQWVG 444
           + +  E + + PA    P W+G
Sbjct: 207 DRKTVENITDNPAQDIIPMWIG 228



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 83/244 (34%), Gaps = 11/244 (4%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             F +          S   +     +  D    R         L E   SP+ +++    
Sbjct: 274 IVFENGGYIYKMDAGSKKPEKVNITLTSDNIYARSEIKDGAGYLTEASLSPDGERLVVTA 333

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             +     V+ +            +  +     ++S +GK  +         ++Y  D  
Sbjct: 334 RGE-----VFNLPVEKGVTKNITRSPGAHDRDAQWSPDGKFIVYISDATGETELYMQDAT 388

Query: 291 SNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                +LT +      S   SPDS  +V+  DR  K ++ ++         + QD     
Sbjct: 389 GGEPVQLTKDNDTYIRSFELSPDSKTLVYT-DR--KNRVNLLDIATKQVTTLLQDPMGEP 445

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAI-GVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
               +SP    + +T+    +++I  V    D  +  +  +  +  +P +S  G+ L+F+
Sbjct: 446 RGVTFSPDSKWLTYTRTGNNEYSIVYVYNLVDRKEYPVTDKWYDSSSPVFSTDGKYLVFA 505

Query: 408 RKKD 411
             +D
Sbjct: 506 SARD 509



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 53/280 (18%), Positives = 98/280 (35%), Gaps = 48/280 (17%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G     LT S       PRFSP+ + +A+    D +   VY M       P 
Sbjct: 45  DLYKVPATGGEAGRLT-SHVGYEMFPRFSPDGKTIAFTGQYDGNT-EVYTMPV-TGGEPL 101

Query: 252 RIG------------NFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERL 297
           R+                   +   ++ +G R +    +    +  +++V+ +   +E +
Sbjct: 102 RVTYTATNSRDDLGDRMGPNNIVMTWTPDGSRIVYRNRISDGFSGKLFTVEKEGGLSEVI 161

Query: 298 TNTLFINISASYSPDSSQIVFES----DREGK-------EQLYVMQSNGSDQKRISQDKE 346
                     SYSPD  Q+ +       R  K       + +++   +    + I+ D  
Sbjct: 162 PLPEG--GFCSYSPDGKQLAYNRVMREFRTWKYYKGGMADDIWIYNPDRKTVENIT-DNP 218

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSL 404
           A    P+W   GD I F         I V      Q   + +  + +++ P  S +G  +
Sbjct: 219 AQDIIPMW--IGDEIFFLSDRDRTMNIFVYNTKTKQTDKVTDFTEYDVKFP--SANGNMI 274

Query: 405 IFSRKKDGDTGSKLYSIDLNGR-----NETLINTPAYASD 439
           +F      + G  +Y +D   +     N TL +   YA  
Sbjct: 275 VF------ENGGYIYKMDAGSKKPEKVNITLTSDNIYARS 308



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 78/223 (34%), Gaps = 26/223 (11%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFR--LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           GA  L    +  +G+ RL V  R  ++++   K +      S  A  R            
Sbjct: 313 GAGYLTEASLSPDGE-RLVVTARGEVFNLPVEKGVTKNITRSPGAHDRDA---------- 361

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                 G F   I+++S++      +  L + D  G     LT   D  +     SP+ +
Sbjct: 362 -QWSPDGKF---IVYISDATG----ETELYMQDATGGEPVQLTKDNDTYIRSFELSPDSK 413

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            + Y    +    RV L+D    +    + +         FS + K    +   +    I
Sbjct: 414 TLVYTDRKN----RVNLLDIATKQVTTLLQDPMGEPRGVTFSPDSKWLTYTRTGNNEYSI 469

Query: 285 -YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            Y  +L       +T+  + + S  +S D   +VF S R+   
Sbjct: 470 VYVYNLVDRKEYPVTDKWYDSSSPVFSTDGKYLVFASARDFNP 512


>gi|302823172|ref|XP_002993240.1| hypothetical protein SELMODRAFT_136782 [Selaginella moellendorffii]
 gi|300138910|gb|EFJ05661.1| hypothetical protein SELMODRAFT_136782 [Selaginella moellendorffii]
          Length = 717

 Score =  116 bits (291), Expect = 6e-24,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 96/267 (35%), Gaps = 43/267 (16%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P FSP+ + +A+    DE    +Y+         K    F        +    K  L +
Sbjct: 426 FPVFSPDGESIAFIPDLDEGG--IYVTRLNGSGLTKV---FDKPAFGLSWDKQRKGVLYT 480

Query: 276 VQKDEAMD-------IYSVDLQ-----SNATER---LT-NTLFINISASYSPDSSQIVFE 319
                 +        +  ++            +   LT +    N   S SPD   IVF 
Sbjct: 481 SYGPGFVPEDTIVHIVSILNADELIAGGGGEVKWKILTKSGTKNNAFPSPSPDGKWIVFR 540

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFS----GEKFAI 373
           S R G + LY+M +   ++  + +  E ++ D    WS  G+ IAF+       G  F +
Sbjct: 541 SGRSGHKNLYIMDAIHGEEASLRRLTEGAWTDTMASWSHDGEWIAFSSDRHNPGGGSFQL 600

Query: 374 GVMKKDGSQE-RLL--VEDSNLQAPTWSPSGRSLIFSRKKDG------------DTGSKL 418
             ++ DGSQ  R+L       +  P +SP  RSL+F+    G                ++
Sbjct: 601 YFVRPDGSQLHRVLNSSTGGRVNHPFFSPDSRSLVFTTDYAGVSADPIAVPAQFQPYGEI 660

Query: 419 YSIDLNGRNETLINTPAY-ASDPQWVG 444
           +   ++G     +   AY    P W  
Sbjct: 661 FMARIDGSELVRLTHNAYEDGTPSWGP 687



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 65/411 (15%), Positives = 129/411 (31%), Gaps = 102/411 (24%)

Query: 130 LWD---VKDRKQIIGKKFFSSPASWRKIAHTISDDIY---------QSITGEKGDFNSRI 177
           L+D   V D + I          S +  A   S DI          + +T      +   
Sbjct: 183 LYDRPSVADGRVIFVSTRKRREQSRQSWAAVYSMDIVTKKITRLTPEGVTDYSPSVSPSG 242

Query: 178 LFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRDQILF----EPRFSPNQQKVAYATYD 232
            FV  +   G      +  +D D  + +    S  +++      P +S +   V +    
Sbjct: 243 KFVMVASDDGRGWGGEIEELDTDLYSFQAWDGSGRKLVVKNGGWPSWS-DDSTVFFHRRA 301

Query: 233 DEDILRVY---LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--V 287
           ++    VY      +      +RI         P  S  GK   ++ ++  ++  +    
Sbjct: 302 EDGWWSVYKATFSKSFTAIREERITPPGVHAFTPAASRTGKWIAVATRRAGSLYRHVEVF 361

Query: 288 DLQSNATERLTNTLFINIS----------------------------------------- 306
           DL S    +++  +                                              
Sbjct: 362 DLGSRKFHKVSELVAPEAHHYNPFVSPESDKIGYHRCRGKGVTPRLEHIKSPVPGISLVR 421

Query: 307 -----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  +SPD   I F  D + +  +YV + NGS    +++  +   F   W  Q   +
Sbjct: 422 VDGDFPVFSPDGESIAFIPDLD-EGGIYVTRLNGSG---LTKVFDKPAFGLSWDKQRKGV 477

Query: 362 AFTKFSGE-------KFAIGVMKKD-----GSQE---RLLVEDS--NLQAPTWSPSGRSL 404
            +T +             + ++  D     G  E   ++L +    N   P+ SP G+ +
Sbjct: 478 LYTSYGPGFVPEDTIVHIVSILNADELIAGGGGEVKWKILTKSGTKNNAFPSPSPDGKWI 537

Query: 405 IFSRKKDGDTGSKLYSID-LNGRNETLI---------NTPAYASDPQWVGF 445
           +F   + G     LY +D ++G   +L             +++ D +W+ F
Sbjct: 538 VFRSGRSGHKN--LYIMDAIHGEEASLRRLTEGAWTDTMASWSHDGEWIAF 586



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 63/174 (36%), Gaps = 22/174 (12%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILA 262
           + LT S  +    P  SP+ + + + +       L +       + + +R+         
Sbjct: 515 KILTKSGTKNNAFPSPSPDGKWIVFRSGRSGHKNLYIMDAIHGEEASLRRLTEGAWTDTM 574

Query: 263 PRFSSNGKRALISVQK----DEAMDIYSVDLQSNATERLTNTL--FINISASYSPDSSQI 316
             +S +G+    S  +      +  +Y V    +   R+ N+          +SPDS  +
Sbjct: 575 ASWSHDGEWIAFSSDRHNPGGGSFQLYFVRPDGSQLHRVLNSSTGGRVNHPFFSPDSRSL 634

Query: 317 VFESDREG--------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           VF +D  G                ++++ + +GS+  R++ +       P W P
Sbjct: 635 VFTTDYAGVSADPIAVPAQFQPYGEIFMARIDGSELVRLTHNA-YEDGTPSWGP 687



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 100/283 (35%), Gaps = 20/283 (7%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNS---LCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           ++       + R++FVS        + S   +  MD     I  LTP      + P  SP
Sbjct: 182 ALYDRPSVADGRVIFVSTRKRREQSRQSWAAVYSMDIVTKKITRLTPEG-VTDYSPSVSP 240

Query: 222 NQQKVAYATYDDED-ILRVYLMDTRIDRAPKRIGNFRSMIL----APRFSSNGKRALISV 276
           + + V  A+ D       +  +DT +       G+ R +++     P +S +        
Sbjct: 241 SGKFVMVASDDGRGWGGEIEELDTDLYSFQAWDGSGRKLVVKNGGWPSWSDDSTVFFHRR 300

Query: 277 QKDEAMDIYSVDLQSN----ATERLTNTLFINISASYSPDSSQIVFESDREGK--EQLYV 330
            +D    +Y      +      ER+T       + + S     I   + R G     + V
Sbjct: 301 AEDGWWSVYKATFSKSFTAIREERITPPGVHAFTPAASRTGKWIAVATRRAGSLYRHVEV 360

Query: 331 MQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                    ++S+    EA +++P  SP+ D I + +  G+     +         + + 
Sbjct: 361 FDLGSRKFHKVSELVAPEAHHYNPFVSPESDKIGYHRCRGKGVTPRLEHIKSPVPGISLV 420

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             +   P +SP G S+ F    D      +Y   LNG   T +
Sbjct: 421 RVDGDFPVFSPDGESIAFIPDLDEGG---IYVTRLNGSGLTKV 460


>gi|86142431|ref|ZP_01060941.1| putative exported tricorn protease [Leeuwenhoekiella blandensis
           MED217]
 gi|85831183|gb|EAQ49640.1| putative exported tricorn protease [Leeuwenhoekiella blandensis
           MED217]
          Length = 1080

 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 90/234 (38%), Gaps = 33/234 (14%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P  S     +A+   +D        +  R    P+R+     +   P FS +GK    S 
Sbjct: 34  PAISN--THIAFIYAED------LWVANRDGSQPRRLTIDEGVESNPIFSPDGKTIAFSA 85

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE----GKEQLYVMQ 332
           + D  MDI+SV +      RLT   + +I+  ++PD   +VF S R         L+ + 
Sbjct: 86  EYDGNMDIFSVPVTGGVPTRLTFHPYPDIARDFTPDGKSVVFASQRTLFTNRYTSLFTVP 145

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVMKKDGS 381
            +G     +S+ +  + +   +S  G  IA+T              G +  I +      
Sbjct: 146 LSGGP---VSELEIPNAYWASYSEDGKYIAYTPIPDRFNQWKHYRGGTQTRIYIYDTATQ 202

Query: 382 QERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +   +      SN   P +   G S+ F   +DG+    LY+ DL  +  + + 
Sbjct: 203 EVVEIPKPAAGSNDAQPEFI--GNSVYFRSDRDGEF--NLYAYDLASKQVSKLT 252



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 93/260 (35%), Gaps = 35/260 (13%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +       N+ I F+            L V +RDG+  R LT   + +   P FSP+ +
Sbjct: 29  RLMDAPAISNTHIAFI--------YAEDLWVANRDGSQPRRLTID-EGVESNPIFSPDGK 79

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----DE 280
            +A++   D + + ++ +       P R+       +A  F+ +GK  + + Q+    + 
Sbjct: 80  TIAFSAEYDGN-MDIFSVPV-TGGVPTRLTFHPYPDIARDFTPDGKSVVFASQRTLFTNR 137

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----------SDREGKE-QLY 329
              +++V L       L         ASYS D   I +             R G + ++Y
Sbjct: 138 YTSLFTVPLSGGPVSELEIPNAY--WASYSEDGKYIAYTPIPDRFNQWKHYRGGTQTRIY 195

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +  +   +   I +    S       P+  G+ + F      +F +        Q   L 
Sbjct: 196 IYDTATQEVVEIPKPAAGSNDAQ---PEFIGNSVYFRSDRDGEFNLYAYDLASKQVSKLT 252

Query: 388 E--DSNLQAPTWSPSGRSLI 405
           +  D  L+    S  G  ++
Sbjct: 253 DFKDFGLEDLEASSDGMLIL 272



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 101/341 (29%), Gaps = 82/341 (24%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA------ 229
            ++F S+  +      SL  +   G  +  L        +   +S + + +AY       
Sbjct: 124 SVVFASQRTLFTNRYTSLFTVPLSGGPVSELEIPN---AYWASYSEDGKYIAYTPIPDRF 180

Query: 230 ----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQKDEAMDI 284
                Y      R+Y+ DT      +          A P F   G        +D   ++
Sbjct: 181 NQWKHYRGGTQTRIYIYDTATQEVVEIPKPAAGSNDAQPEF--IGNSVYFRSDRDGEFNL 238

Query: 285 YSVDLQSNATERLTNTLFINIS------------------ASYSPDSSQIV--------- 317
           Y+ DL S    +LT+     +                    +++P + Q+          
Sbjct: 239 YAYDLASKQVSKLTDFKDFGLEDLEASSDGMLILEQAGYLHTFNPSTKQLTNLKIGIATD 298

Query: 318 -------FESD----REG-------------KEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                  F S     R G             + ++  + S   D   ++Q        P 
Sbjct: 299 LLELRPRFVSGSYYVRSGGISPSGARVVADFRGEIVTLPSEKGDMVNLTQTPGVHETFPA 358

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMK---KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           WSP    IA+   +  ++A+ +      D ++   L          WSP    + +    
Sbjct: 359 WSPDSKHIAYFSDASGEYALHIKDQNSTDAAKAIALDGTGFYAHLHWSPDSEKIAYV--- 415

Query: 411 DGDTGSKLYSIDL-NGRNET----LINTPAYASD--PQWVG 444
             D G  LY   +  G+ +     ++  P    D    W  
Sbjct: 416 --DNGRNLYITTVATGKTQKVAQDVLYQPGEYRDLFGSWSA 454



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 73/231 (31%), Gaps = 17/231 (7%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D   +R    S    +     SP+  +V       +    +  + +              
Sbjct: 298 DLLELRPRFVSGSYYVRSGGISPSGARVV-----ADFRGEIVTLPSEKGDMVNLTQTPGV 352

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQI 316
               P +S + K             ++  D  S    +    +         +SPDS +I
Sbjct: 353 HETFPAWSPDSKHIAYFSDASGEYALHIKDQNSTDAAKAIALDGTGFYAHLHWSPDSEKI 412

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQD-----KEASYFDPVWSPQGDLIAFTKFSGEKF 371
            +    +    LY+        ++++QD      E       WS  G+ +A+T  +   F
Sbjct: 413 AYV---DNGRNLYITTVATGKTQKVAQDVLYQPGEYRDLFGSWSADGNWLAYTLITNTNF 469

Query: 372 A-IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               V     ++   + +  SN+  PT+ PSG+ L  +   D       + 
Sbjct: 470 EQAYVYSLSENKSYPISDGLSNVTEPTFDPSGKYLYLTASTDAGPVVNWFD 520



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 74/217 (34%), Gaps = 11/217 (5%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S  +  S + V    +  +  +  +  ++  LT +       P +SP+ + +AY +    
Sbjct: 315 SGGISPSGARVVADFRGEIVTLPSEKGDMVNLTQTPGVHETFPAWSPDSKHIAYFSDASG 374

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +           D A     +         +S + ++       D   ++Y   + +  T
Sbjct: 375 EYALHIKDQNSTDAAKAIALDGTGFYAHLHWSPDSEKIAYV---DNGRNLYITTVATGKT 431

Query: 295 ERLTN------TLFINISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEA 347
           +++          + ++  S+S D + + +        EQ YV   + +    IS D  +
Sbjct: 432 QKVAQDVLYQPGEYRDLFGSWSADGNWLAYTLITNTNFEQAYVYSLSENKSYPIS-DGLS 490

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +  +P + P G  +  T  +     +    +      
Sbjct: 491 NVTEPTFDPSGKYLYLTASTDAGPVVNWFDQSNQDMT 527


>gi|288555459|ref|YP_003427394.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Bacillus pseudofirmus OF4]
 gi|288546619|gb|ADC50502.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Bacillus pseudofirmus OF4]
          Length = 663

 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 78/241 (32%), Gaps = 53/241 (21%)

Query: 216 EPRFSPNQQKVAYATY----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            P+ SP+ + V +       D  D      +     +  ++          P +S +G+ 
Sbjct: 18  NPQLSPDGKNVVFVQTVINEDKHDYESHLFISDIDGKQVRQWTFGDGSDNTPAWSPDGRF 77

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------------ 319
              +  +     IY +  +     ++T+ L    +  +SPDSS+I+FE            
Sbjct: 78  IAFTSTRSGKSQIYLISAEGGEARQITSCLNGAKNPIWSPDSSKILFEGSLAPNEKLTDK 137

Query: 320 ------------------------SDREG-----KEQLYVMQSNGSDQKRISQDKEASYF 350
                                   SD  G      + L ++     +  +++ D +  + 
Sbjct: 138 KRDKKEKNGDKLPEPMVVERIRYKSDATGFLDDKNQHLGIVTVETGEVLQLT-DGDRDHA 196

Query: 351 DPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRS 403
              WS  G  I F+   GE         + +M     Q   +        +P +SP G+ 
Sbjct: 197 AGAWSADGQSIVFSADLGEDPDFSHISDVYIMSLADKQLTKITPSTGFFGSPNYSPDGKY 256

Query: 404 L 404
           +
Sbjct: 257 I 257



 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 91/309 (29%), Gaps = 74/309 (23%)

Query: 177 ILFVSESVVSGIIKNS--LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++FV   +          L + D DG  +R  T   D     P +SP+ + +A+ +    
Sbjct: 28  VVFVQTVINEDKHDYESHLFISDIDGKQVRQWTFG-DGSDNTPAWSPDGRFIAFTSTRSG 86

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----------------- 277
              ++YL+        ++I +  +    P +S +  + L                     
Sbjct: 87  KS-QIYLISAE-GGEARQITSCLNGAKNPIWSPDSSKILFEGSLAPNEKLTDKKRDKKEK 144

Query: 278 ------------------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                                    D+   +  V +++    +LT+    + + ++S D 
Sbjct: 145 NGDKLPEPMVVERIRYKSDATGFLDDKNQHLGIVTVETGEVLQLTDGDRDHAAGAWSADG 204

Query: 314 SQIVFESDREGKE------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
             IVF +D            +Y+M        +I+      +  P +SP G  I      
Sbjct: 205 QSIVFSADLGEDPDFSHISDVYIMSLADKQLTKITPST-GFFGSPNYSPDGKYITLIGHE 263

Query: 367 ----SGEKFAIGVMKKDGSQERLLVEDSN----------------LQAPTWSPSGRSLIF 406
               S     + + + +      L  D +                 Q   W+   +   F
Sbjct: 264 KEYKSATLSRVWLYELESQSLHCLTADLDIHVGDIAIGDFHSAIVDQGAVWTNDSKGFYF 323

Query: 407 SRKKDGDTG 415
                G T 
Sbjct: 324 LVTDQGRTA 332



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 8/108 (7%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +   SPD   +VF          + +  L++   +G   ++ +   + S   P WSP G 
Sbjct: 18  NPQLSPDGKNVVFVQTVINEDKHDYESHLFISDIDGKQVRQWTF-GDGSDNTPAWSPDGR 76

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
            IAFT     K  I ++  +G + R +    +  + P WSP    ++F
Sbjct: 77  FIAFTSTRSGKSQIYLISAEGGEARQITSCLNGAKNPIWSPDSSKILF 124



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 68/213 (31%), Gaps = 29/213 (13%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGN 255
           G  ++     RD       +S + Q + ++    ED    ++ D  I    D+   +I  
Sbjct: 183 GEVLQLTDGDRDHAAG--AWSADGQSIVFSADLGEDPDFSHISDVYIMSLADKQLTKITP 240

Query: 256 FRSMILAPRFSSNGKRALISVQKDEA-----MDIYSVDLQSNATERLTNTLFI------- 303
                 +P +S +GK   +   + E        ++  +L+S +   LT  L I       
Sbjct: 241 STGFFGSPNYSPDGKYITLIGHEKEYKSATLSRVWLYELESQSLHCLTADLDIHVGDIAI 300

Query: 304 --------NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                   +  A ++ DS    F    +G+  +Y     G     +  +     +    +
Sbjct: 301 GDFHSAIVDQGAVWTNDSKGFYFLVTDQGRTAVYYGTIEGEMYPAM--NDNEHVYGMTIN 358

Query: 356 PQ-GDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           P   + +A          +  +     +   L 
Sbjct: 359 PDTHEAVAAISNPTHPGDLFKVNLSTGERTQLT 391



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 35/71 (49%), Gaps = 11/71 (15%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLI-------NTP 434
           L +  +++ P  SP G++++F +        D  S L+  D++G+            NTP
Sbjct: 10  LYKLKSVKNPQLSPDGKNVVFVQTVINEDKHDYESHLFISDIDGKQVRQWTFGDGSDNTP 69

Query: 435 AYASDPQWVGF 445
           A++ D +++ F
Sbjct: 70  AWSPDGRFIAF 80


>gi|260173764|ref|ZP_05760176.1| putative peptidase/protease family protein [Bacteroides sp. D2]
 gi|315922028|ref|ZP_07918268.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313695903|gb|EFS32738.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 1083

 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 80/221 (36%), Gaps = 34/221 (15%)

Query: 252 RIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +    S  + P +      S +G   +   + D    IY V  Q     +LT       
Sbjct: 11  VLSALSSYAITPLWMRDARISPDGTEIVFCYKGD----IYKVPAQGGTAVQLTTQASYEA 66

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  +SPD  QI F SDR G   L++M ++G   +R++    AS     ++P G  + F+ 
Sbjct: 67  NPVWSPDGKQIAFASDRNGNFDLFIMPADGGVARRLTY-HSASEIPSAFTPDGKYVLFSA 125

Query: 366 F-----------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--- 411
                       +G    +  +  DG +   ++     +   +  +G++ ++  +K    
Sbjct: 126 SIQDPANSALFPTGAMTELYKVSVDGGRTEQVLATP-AELVCFDKAGKNFLYQDRKGFED 184

Query: 412 -------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                        ++  +   G++  L N      +P +  
Sbjct: 185 EWRKHHTSSITRDIWLYNTQTGKHTNLTNRGGEDRNPVYAP 225



 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 83/237 (35%), Gaps = 36/237 (15%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            + + R SP+  ++ +      DI +V            ++    S    P +S +GK+ 
Sbjct: 24  WMRDARISPDGTEIVFCY--KGDIYKVPAQ----GGTAVQLTTQASYEANPVWSPDGKQI 77

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
             +  ++   D++ +        RLT      I ++++PD   ++F +            
Sbjct: 78  AFASDRNGNFDLFIMPADGGVARRLTYHSASEIPSAFTPDGKYVLFSASIQDPANSALFP 137

Query: 322 REGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAF------------TKFSG 368
                +LY +  +G   ++ ++   E   FD      G    +               S 
Sbjct: 138 TGAMTELYKVSVDGGRTEQVLATPAELVCFDKA----GKNFLYQDRKGFEDEWRKHHTSS 193

Query: 369 EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               I +      +   L       + P ++P G ++ F  +++G +   +Y+  LN
Sbjct: 194 ITRDIWLYNTQTGKHTNLTNRGGEDRNPVYAPDGNTVYFLSERNGGS-FNVYTFPLN 249



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 98/310 (31%), Gaps = 81/310 (26%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM------- 259
             +R      P ++P+   V + +  +     VY       +  K +  F++        
Sbjct: 211 LTNRGGEDRNPVYAPDGNTVYFLSERNGGSFNVYTFPLNTPQEVKAVTTFKTHPVRFLSV 270

Query: 260 ----------------------------------------------ILAPRFSSNGKRAL 273
                                                           +   S +GK+  
Sbjct: 271 SDKGTLCYTYDGELYTQKPGARPEKVKVELVRDDDEQVAALKFSQGATSASVSPDGKQVA 330

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM-- 331
             V+ D    ++        T+++TNT     S S++PD+  +V+ S+R G  QLY    
Sbjct: 331 FIVRGD----VFVTSTDYATTKQITNTPAKEASVSFAPDNRTLVYASERTGNWQLYTAKI 386

Query: 332 ---------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                     +   +++ +   K      P +SP G  +AF +       + V+     +
Sbjct: 387 SRKEDPNFPNATLIEEEVLLPSKTVERAYPQYSPDGKELAFIEDRN---RLMVLDLKTKK 443

Query: 383 ERLLVEDSNLQ------APTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            R + + S            WSP G+   L F   +  D  S +  +   G   T +   
Sbjct: 444 VRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRH-DPYSDIGIVSAQGGAITNLTNS 502

Query: 435 AYAS-DPQWV 443
            Y S  P+WV
Sbjct: 503 GYISGSPRWV 512



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 76/215 (35%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++VA+    D        + +      K+I N  +   +  F+ + +  + + +
Sbjct: 321 SVSPDGKQVAFIVRGD------VFVTSTDYATTKQITNTPAKEASVSFAPDNRTLVYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS------------ASYSPDSSQIVFESDREGK 325
           +     +Y+  +         N   I                 YSPD  ++ F  DR   
Sbjct: 375 RTGNWQLYTAKISRKEDPNFPNATLIEEEVLLPSKTVERAYPQYSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  IG++  
Sbjct: 432 NRLMVLDLKTKKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDIGIVSA 491

Query: 379 DGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G     L     +  +P W   G +++F  ++ G
Sbjct: 492 QGGAITNLTNSGYISGSPRWVLDGNAILFQTERYG 526



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 79/234 (33%), Gaps = 32/234 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +       
Sbjct: 41  YKGDIYKVPAQGGTAVQLTTQAS-YEANPVWSPDGKQIAFASDRNGNFDLFIM--PADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERL 297
             +R+    +  +   F+ +GK  L S                  ++Y V +    TE++
Sbjct: 98  VARRLTYHSASEIPSAFTPDGKYVLFSASIQDPANSALFPTGAMTELYKVSVDGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  +       ++  
Sbjct: 158 LATPAELV--CFDKAGKNFLYQ-DRKGFEDEWRKHHTSSITRDIWLYNTQTGKHTNLTNR 214

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 +PV++P G+ + F ++ +G  F +     +  QE   V         +
Sbjct: 215 G-GEDRNPVYAPDGNTVYFLSERNGGSFNVYTFPLNTPQEVKAVTTFKTHPVRF 267



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 85/220 (38%), Gaps = 22/220 (10%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK     V   ++ V        K+  ++PA    ++    +      +   G+
Sbjct: 320 ASVSPDGKQVAFIVRGDVF-VTSTDYATTKQITNTPAKEASVSFAPDNRTLVYASERTGN 378

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +      +S          +L            L PS+      P++SP+ +++A+    
Sbjct: 379 WQLYTAKISRKEDPNFPNATLI-------EEEVLLPSKTVERAYPQYSPDGKELAFI--- 428

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRA---LISVQKDEAMDI 284
            ED  R+ ++D +  +  +++ +              +S +GK      I  + D   DI
Sbjct: 429 -EDRNRLMVLDLKT-KKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDI 486

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
             V  Q  A   LTN+ +I+ S  +  D + I+F+++R G
Sbjct: 487 GIVSAQGGAITNLTNSGYISGSPRWVLDGNAILFQTERYG 526


>gi|325280803|ref|YP_004253345.1| peptidase S41 [Odoribacter splanchnicus DSM 20712]
 gi|324312612|gb|ADY33165.1| peptidase S41 [Odoribacter splanchnicus DSM 20712]
          Length = 1110

 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 90/229 (39%), Gaps = 33/229 (14%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +  P  SP+ + +A+    D     ++L+ +   RA + +    +    P +S +G
Sbjct: 24  NPLWMRYPAISPDGKTIAFCYKGD-----IFLVSSEGGRATQ-LTTHPAYDSRPVWSPDG 77

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------- 322
           K    +  +DE +++Y+V +      RLT      I   ++PD  +I++ S+        
Sbjct: 78  KTIAFTSARDEGLNLYTVPVSGGTPTRLTYYSGSEIPVCFTPDGKEILYRSNVMPDAEYG 137

Query: 323 --EGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------- 372
                 Q+Y +  +G   ++ ++ D     FD  ++ +GD I +  + G +         
Sbjct: 138 QFPSGGQVYKISVDGGRPEQFLTFD----AFDINFNKKGDKIIYHDYKGYEDNWRKHHKS 193

Query: 373 -----IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                I +      +   L       + P ++ +  ++ F  ++ GD  
Sbjct: 194 SVCRDIWIHDLKSGEFTNLTNKQVEDRNPVFADNDENIYFLSERFGDFN 242



 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 63/304 (20%), Positives = 113/304 (37%), Gaps = 39/304 (12%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+    ++   GDFN  +  +S    S I +    +       +R+L+ S D +L    +
Sbjct: 228 DENIYFLSERFGDFN--VCKMSLKNPSDIKQ----ITKHSKHPVRFLSSSEDGLLC---Y 278

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
             N +            L V ++    +    ++   R        S +GK     V+ D
Sbjct: 279 FFNGEIYTLQPGKQPKKLAVDIIADNTESPIAKMNWNRGASEM-ALSPDGKEFAFIVRGD 337

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS--- 336
               +Y  + +   T+R+TNT     S  +SPD   +V+  +R G   +YV +       
Sbjct: 338 ----VYVANAEYGTTKRITNTATQERSVEFSPDGRSLVYAGERNGHWNIYVARIKDKDDK 393

Query: 337 --------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-- 386
                   ++++I++   A  F P +SP G  IA+ +       I V+     + R +  
Sbjct: 394 SFAYAKEIEEEQITKGTNA-CFQPSFSPDGKEIAYLENRT---EIKVINLKSKKSRTVLP 449

Query: 387 -----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYAS 438
                      Q   WSP GR ++    + G        L   D +G    L N+     
Sbjct: 450 AKYNYSYQDGDQWYQWSPDGRWILAKYFEHGGWQHNDIALVKADGSGEIHNLTNSGYSDQ 509

Query: 439 DPQW 442
           +P+W
Sbjct: 510 NPKW 513



 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 91/235 (38%), Gaps = 37/235 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++ A+    D     VY+ +       KRI N  +   +  FS +G+  + + +
Sbjct: 322 ALSPDGKEFAFIVRGD-----VYVANAEYGT-TKRITNTATQERSVEFSPDGRSLVYAGE 375

Query: 278 KDEAMDIYSVDLQSN-----------ATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           ++   +IY   ++               E++T         S+SPD  +I +  +R    
Sbjct: 376 RNGHWNIYVARIKDKDDKSFAYAKEIEEEQITKGTNACFQPSFSPDGKEIAYLENRT--- 432

Query: 327 QLYVMQSNGSDQKRISQDKEASYF-----DPVWSPQGDLIAFTKFSGEKFA---IGVMKK 378
           ++ V+       + +   K    +        WSP G  I    F    +    I ++K 
Sbjct: 433 EIKVINLKSKKSRTVLPAKYNYSYQDGDQWYQWSPDGRWILAKYFEHGGWQHNDIALVKA 492

Query: 379 DGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDG-------DTGSKLYSIDLN 424
           DGS E   L     + Q P W  +G+++I+S  + G            +Y++ L+
Sbjct: 493 DGSGEIHNLTNSGYSDQNPKWMMNGKAIIWSTDRQGMRSHGSWGAQYDIYALFLD 547



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 79/226 (34%), Gaps = 28/226 (12%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  + ++  +G     LT         P +SP+ + +A+ +  DE  L +Y +      
Sbjct: 44  YKGDIFLVSSEGGRATQLTT-HPAYDSRPVWSPDGKTIAFTSARDEG-LNLYTVPV-SGG 100

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISV---------QKDEAMDIYSVDLQSNATERLTN 299
            P R+  +    +   F+ +GK  L            Q      +Y + +     E+   
Sbjct: 101 TPTRLTYYSGSEIPVCFTPDGKEILYRSNVMPDAEYGQFPSGGQVYKISVDGGRPEQFLT 160

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQ------------LYVMQSNGSDQKRISQDKEA 347
               +I  +++    +I++   +  ++             +++      +   ++ +K+ 
Sbjct: 161 FDAFDI--NFNKKGDKIIYHDYKGYEDNWRKHHKSSVCRDIWIHDLKSGEFTNLT-NKQV 217

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNL 392
              +PV++   + I F       F +  M     S  + + + S  
Sbjct: 218 EDRNPVFADNDENIYFLSERFGDFNVCKMSLKNPSDIKQITKHSKH 263



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 53/327 (16%), Positives = 102/327 (31%), Gaps = 84/327 (25%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +  ++     ++ +       N   V    G   R    S  +I     F+P+ +++ Y 
Sbjct: 70  RPVWSPDGKTIAFTSARDEGLNLYTVPVSGGTPTRLTYYSGSEIPV--CFTPDGKEILYR 127

Query: 230 TYDDED--------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +    D          +VY +     R P++   F +  +   F+  G + +    K   
Sbjct: 128 SNVMPDAEYGQFPSGGQVYKISVDGGR-PEQFLTFDAFDI--NFNKKGDKIIYHDYKGYE 184

Query: 282 M------------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
                        DI+  DL+S     LTN    + +  ++ +   I F S+R G   + 
Sbjct: 185 DNWRKHHKSSVCRDIWIHDLKSGEFTNLTNKQVEDRNPVFADNDENIYFLSERFGDFNVC 244

Query: 330 VMQS-NGSDQKRIS---------------------QDKEASYFDP--------------- 352
            M   N SD K+I+                      + E     P               
Sbjct: 245 KMSLKNPSDIKQITKHSKHPVRFLSSSEDGLLCYFFNGEIYTLQPGKQPKKLAVDIIADN 304

Query: 353 -----------------VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-A 394
                              SP G   AF         + V   +    + +   +  + +
Sbjct: 305 TESPIAKMNWNRGASEMALSPDGKEFAFIVRGD----VYVANAEYGTTKRITNTATQERS 360

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +SP GRSL+++ +++G     +  I
Sbjct: 361 VEFSPDGRSLVYAGERNGHWNIYVARI 387



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 7/82 (8%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           P  SP G  IAF         I ++  +G +  +L    +    P WSP G+++ F+  +
Sbjct: 31  PAISPDGKTIAFCYKGD----IFLVSSEGGRATQLTTHPAYDSRPVWSPDGKTIAFTSAR 86

Query: 411 DGDTGSKLYSIDLNGRNETLIN 432
             D G  LY++ ++G   T + 
Sbjct: 87  --DEGLNLYTVPVSGGTPTRLT 106



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 50/118 (42%), Gaps = 5/118 (4%)

Query: 212 QILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
              F+P FSP+ +++AY     E  ++ +    +R     K   +++      ++S +G+
Sbjct: 411 NACFQPSFSPDGKEIAYLENRTEIKVINLKSKKSRTVLPAKYNYSYQDGDQWYQWSPDGR 470

Query: 271 RALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG 324
             L    +       DI  V          LTN+ + + +  +  +   I++ +DR+G
Sbjct: 471 WILAKYFEHGGWQHNDIALVKADGSGEIHNLTNSGYSDQNPKWMMNGKAIIWSTDRQG 528



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 7/54 (12%)

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           ++ P  SP G+++ F  K        ++ +   G   T + T PAY S P W  
Sbjct: 28  MRYPAISPDGKTIAFCYK------GDIFLVSSEGGRATQLTTHPAYDSRPVWSP 75


>gi|329889327|ref|ZP_08267670.1| prolyl oligopeptidase family protein [Brevundimonas diminuta ATCC
           11568]
 gi|328844628|gb|EGF94192.1| prolyl oligopeptidase family protein [Brevundimonas diminuta ATCC
           11568]
          Length = 698

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 59/314 (18%), Positives = 117/314 (37%), Gaps = 62/314 (19%)

Query: 175 SRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            +I +V ++    +  ++ ++ ++D        L  S      +PR+SP+  +++Y +  
Sbjct: 62  GQIAYVRQTADIMTDRMRPTIWLIDVKTGRHSPLVAS-AGSHRQPRWSPDGTRLSYISSA 120

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV---------------- 276
           +    ++++          R+ N  +   +  +S NG++   SV                
Sbjct: 121 EGGAPQLFV-RWMASGESVRVTNLPNTPSSVSWSPNGEQLAYSVLVPGEKPKIGSPLAKP 179

Query: 277 ------------------------QKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSP 311
                                    K     ++ V  Q     +LT+  F +    S+S 
Sbjct: 180 EGAQWAPPLEIIDSVSYRSDGQGYLKPGFRHVFVVGSQGGGARQLTHGDFHHGGGLSWSA 239

Query: 312 DSSQIVFESDREGKEQ-------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           DS  +   ++R    Q       ++ +         ++  +      PV SP G  IA+ 
Sbjct: 240 DSRTLYLSANRRPDWQREAADSEVFALDVQTGGLTALTS-RAGPDNAPVASPDGRRIAYL 298

Query: 365 KFSGEKF-----AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            +  ++       + VM  DGS  R L E  D ++Q+P WS  GRS+  +    G T  K
Sbjct: 299 GYDDKRMGYHNTRLYVMDADGSNSRALTESLDRSVQSPVWSRDGRSVYVAYDDQGRT--K 356

Query: 418 LYSIDLNGRNETLI 431
           +  + ++G   TLI
Sbjct: 357 VARVSMDGAVTTLI 370



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/323 (17%), Positives = 105/323 (32%), Gaps = 62/323 (19%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-----YDDE 234
           ++++ V      SL   DR     + L     ++  + + SP+  ++AY         D 
Sbjct: 20  MAQTAVQPAAAPSLPTADRGLFTAQDLF--GMEVASDAQISPDGGQIAYVRQTADIMTDR 77

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-LISVQKDEAMDIYSVDLQSNA 293
               ++L+D +  R    + +  S    PR+S +G R   IS  +  A  ++   + S  
Sbjct: 78  MRPTIWLIDVKTGRHSPLVASAGSH-RQPRWSPDGTRLSYISSAEGGAPQLFVRWMASGE 136

Query: 294 TERLTNTLFINISASYSPDSSQIVF--------------------------------ESD 321
           + R+TN      S S+SP+  Q+ +                                 S 
Sbjct: 137 SVRVTNLPNTPSSVSWSPNGEQLAYSVLVPGEKPKIGSPLAKPEGAQWAPPLEIIDSVSY 196

Query: 322 RE--------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-- 371
           R         G   ++V+ S G   ++++           WS     +  +      +  
Sbjct: 197 RSDGQGYLKPGFRHVFVVGSQGGGARQLTHGDFHHGGGLSWSADSRTLYLSANRRPDWQR 256

Query: 372 -----AIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD---GDTGSKLYSID 422
                 +  +         L        AP  SP GR + +    D   G   ++LY +D
Sbjct: 257 EAADSEVFALDVQTGGLTALTSRAGPDNAPVASPDGRRIAYLGYDDKRMGYHNTRLYVMD 316

Query: 423 LNGRNETLIN--TPAYASDPQWV 443
            +G N   +          P W 
Sbjct: 317 ADGSNSRALTESLDRSVQSPVWS 339



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 83/226 (36%), Gaps = 23/226 (10%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------- 283
           Y       V+++ ++   A +             +S++ +   +S  +            
Sbjct: 203 YLKPGFRHVFVVGSQGGGARQLTHGDFHHGGGLSWSADSRTLYLSANRRPDWQREAADSE 262

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD---REG--KEQLYVMQSNGSDQ 338
           ++++D+Q+     LT+    + +   SPD  +I +      R G    +LYVM ++GS+ 
Sbjct: 263 VFALDVQTGGLTALTSRAGPDNAPVASPDGRRIAYLGYDDKRMGYHNTRLYVMDADGSNS 322

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ----- 393
           + +++  + S   PVWS  G  +        +  +  +  DG+   L+ + +        
Sbjct: 323 RALTESLDRSVQSPVWSRDGRSVYVAYDDQGRTKVARVSMDGAVTTLIEDLTGDDIGRPY 382

Query: 394 ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                T +  G ++ ++R                GR+  L    A 
Sbjct: 383 TGGGFTVADDG-AIAYTRGTPTRPADVHVL--KGGRSTQLTRLNAD 425



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 7/102 (6%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVED-SNLQAPTWSPSGR 402
            D   SP G  IA+ + + +         I ++     +   LV    + + P WSP G 
Sbjct: 53  SDAQISPDGGQIAYVRQTADIMTDRMRPTIWLIDVKTGRHSPLVASAGSHRQPRWSPDGT 112

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            L +    +G           +G +  + N P   S   W  
Sbjct: 113 RLSYISSAEGGAPQLFVRWMASGESVRVTNLPNTPSSVSWSP 154



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 10/131 (7%)

Query: 176 RILFVSESVVS-GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           RI ++       G     L VMD DG+N R LT S D+ +  P +S + + V Y  YDD+
Sbjct: 294 RIAYLGYDDKRMGYHNTRLYVMDADGSNSRALTESLDRSVQSPVWSRDGRSV-YVAYDDQ 352

Query: 235 DILRV--YLMDTRIDRAPKRIGNF----RSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
              +V    MD  +    + +                + +G  A          D++   
Sbjct: 353 GRTKVARVSMDGAVTTLIEDLTGDDIGRPYTGGGFTVADDGAIAYTRGTPTRPADVHV-- 410

Query: 289 LQSNATERLTN 299
           L+   + +LT 
Sbjct: 411 LKGGRSTQLTR 421


>gi|218462472|ref|ZP_03502563.1| putative periplasmic component of the Tol biopolymer transport
           system [Rhizobium etli Kim 5]
          Length = 153

 Score =  116 bits (290), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 61/150 (40%), Gaps = 13/150 (8%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                 +D+  DIY++ +   A  RLT+    N    YS D   I F S R G  Q++ +
Sbjct: 1   LAYCGIRDDLFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYFNSSRTGLMQIWRI 60

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQE 383
             +G+  ++++ D   ++F    SP+ D +    +    F         + +M  DG   
Sbjct: 61  HPDGTGLEQVTSDNYGNWFA-HPSPKNDKVLILSYDPSVFDHPRDLDVRLRLMDMDGGNL 119

Query: 384 RLLVE----DSNLQAPTWSPSGRSLIFSRK 409
           + L E       +  P WSP G    + R 
Sbjct: 120 KTLFELFGGQGTINVPCWSPDGEEFAYVRY 149



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 65/151 (43%), Gaps = 12/151 (7%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +AY    D D+  +Y +      A  R+ +       P +S++G+    +  +   M I+
Sbjct: 1   LAYCGIRD-DLFDIYTISVD-GGAETRLTHGEGRNDGPDYSADGQWIYFNSSRTGLMQIW 58

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQI--------VFESDREGKEQLYVMQSNGSD 337
            +       E++T+  + N  A  SP + ++        VF+  R+   +L +M  +G +
Sbjct: 59  RIHPDGTGLEQVTSDNYGNWFAHPSPKNDKVLILSYDPSVFDHPRDLDVRLRLMDMDGGN 118

Query: 338 QKRI--SQDKEASYFDPVWSPQGDLIAFTKF 366
            K +      + +   P WSP G+  A+ ++
Sbjct: 119 LKTLFELFGGQGTINVPCWSPDGEEFAYVRY 149



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 3/78 (3%)

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +A+     + F I  +  DG  E  L         P +S  G+ + F+  + G    +++
Sbjct: 1   LAYCGIRDDLFDIYTISVDGGAETRLTHGEGRNDGPDYSADGQWIYFNSSRTGLM--QIW 58

Query: 420 SIDLNGRNETLINTPAYA 437
            I  +G     + +  Y 
Sbjct: 59  RIHPDGTGLEQVTSDNYG 76



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/140 (12%), Positives = 45/140 (32%), Gaps = 16/140 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  +  DG     LT   +     P +S + Q + + +     +++++ +        +
Sbjct: 12  DIYTISVDGGAETRLTHG-EGRNDGPDYSADGQWIYFNSSRTG-LMQIWRIHPDGTGLEQ 69

Query: 252 RIGNFRSMILAPRFSSNGKRA--------LISVQKDEAMDIYSVDLQSNATERLTNTLF- 302
              +      A   S    +         +    +D  + +  +D+     + L      
Sbjct: 70  VTSDNYGNWFA-HPSPKNDKVLILSYDPSVFDHPRDLDVRLRLMDMDGGNLKTLFELFGG 128

Query: 303 ---INISASYSPDSSQIVFE 319
              IN+   +SPD  +  + 
Sbjct: 129 QGTINV-PCWSPDGEEFAYV 147



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 192 SLCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATY 231
            L +MD DG N++ L         +  P +SP+ ++ AY  Y
Sbjct: 108 RLRLMDMDGGNLKTLFELFGGQGTINVPCWSPDGEEFAYVRY 149


>gi|255531812|ref|YP_003092184.1| hypothetical protein [Pedobacter heparinus DSM 2366]
 gi|255344796|gb|ACU04122.1| WD40 domain protein beta Propeller [Pedobacter heparinus DSM 2366]
          Length = 1060

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 19/201 (9%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATER----------LTNTLFI 303
           N  +M +AP  S +GK      +KD   +D++  D ++    R          + +  F+
Sbjct: 296 NAGNMNVAPSISPDGKYLAFLSEKDLFGIDLFLADAKTGKIIRKLSSQVANSHIDDFNFL 355

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIA 362
             + ++SPD  Q  F    +GK QL ++  + GS   R      A + +  WSP GD IA
Sbjct: 356 ESAGTWSPDGKQFAFSIFSKGKNQLMIINIDNGSVALRADMGDVAQFGNLSWSPNGDDIA 415

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG---DTGSKL 418
           F+     +  I        +   +  D+ +  AP +S  G+ + FS  +     +  + +
Sbjct: 416 FSGMIQGQSDIFSYNLKTKKVTQITNDAYSDYAPAYSQDGKKIAFSSDRASITKNNNTAV 475

Query: 419 YSIDL---NGRNETLINTPAY 436
           +SI+L   +  ++TL + P +
Sbjct: 476 HSINLSIYDIESKTLTDIPVF 496



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 89/248 (35%), Gaps = 28/248 (11%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---------FRSM 259
           +   +   P  SP+ + +A+ +  D   + ++L D +  +  +++ +         F  +
Sbjct: 296 NAGNMNVAPSISPDGKYLAFLSEKDLFGIDLFLADAKTGKIIRKLSSQVANSHIDDFNFL 355

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQI 316
             A  +S +GK+   S+       +  +++ + +   L   +       + S+SP+   I
Sbjct: 356 ESAGTWSPDGKQFAFSIFSKGKNQLMIINIDNGSVA-LRADMGDVAQFGNLSWSPNGDDI 414

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------- 369
            F    +G+  ++          +I+ D   S + P +S  G  IAF+            
Sbjct: 415 AFSGMIQGQSDIFSYNLKTKKVTQITNDA-YSDYAPAYSQDGKKIAFSSDRASITKNNNT 473

Query: 370 ---KFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + +   +        +   +N     +S   + L F   +DG     LY+ +L 
Sbjct: 474 AVHSINLSIYDIESKTLTDIPVFPGANNLNAQFSGDSKRLFFLSNRDGFR--NLYAYNLA 531

Query: 425 GRNETLIN 432
                 + 
Sbjct: 532 DNTVKQLT 539



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 77/235 (32%), Gaps = 19/235 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ ++ A++ +       + +       A +      +      +S NG     S  
Sbjct: 360 TWSPDGKQFAFSIFSKGKNQLMIINIDNGSVALRADMGDVAQFGNLSWSPNGDDIAFSGM 419

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE----------GKEQ 327
                DI+S +L++    ++TN  + + + +YS D  +I F SDR               
Sbjct: 420 IQGQSDIFSYNLKTKKVTQITNDAYSDYAPAYSQDGKKIAFSSDRASITKNNNTAVHSIN 479

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           L +          I     A+  +  +S     + F         +       +  + L 
Sbjct: 480 LSIYDIESKTLTDIPVFPGANNLNAQFSGDSKRLFFLSNRDGFRNLYAYNLADNTVKQLT 539

Query: 388 E------DSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +           +P  S S    +++S  +       LY+  ++      ++  A
Sbjct: 540 DYFTGISGITEFSPAISVSRNDDIVYSYYRSQRYT--LYNSPISSFRSKPVDANA 592


>gi|295087746|emb|CBK69269.1| Periplasmic protease [Bacteroides xylanisolvens XB1A]
          Length = 1072

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 78/231 (33%), Gaps = 34/231 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R SP+  ++ +      DI +V            ++    S    P +S +GK+   +  
Sbjct: 5   RISPDGSEIVFCY--KGDIYKVPAQ----GGTAVQLTTQTSYEANPVWSPDGKQIAFASD 58

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKE 326
           ++   DI+ +     A  RLT      I ++++PD   + F +                 
Sbjct: 59  RNGNFDIFIMPADGGAARRLTYHSASEIPSAFTPDGKYVFFSASIQDPASSALFPTGAMT 118

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIG 374
           +LY +   G   +++     A       +  G    +               S     I 
Sbjct: 119 ELYKVPVAGGRTEQVL-GTPAELVCFDKT--GKNFLYQDRKGFEDEWRKHHTSSITRDIW 175

Query: 375 VMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +      +   L       + P ++P G ++ F  ++DG +   +Y+  LN
Sbjct: 176 LYNTQTGKHTNLTNRGGEDRNPVYAPDGNAVYFLSERDGGS-FNVYTFPLN 225



 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 75/203 (36%), Gaps = 28/203 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R S +G   +   + D    IY V  Q     +LT       +  +SPD  QI F SDR 
Sbjct: 5   RISPDGSEIVFCYKGD----IYKVPAQGGTAVQLTTQTSYEANPVWSPDGKQIAFASDRN 60

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFA 372
           G   +++M ++G   +R++    AS     ++P G  + F+             +G    
Sbjct: 61  GNFDIFIMPADGGAARRLTY-HSASEIPSAFTPDGKYVFFSASIQDPASSALFPTGAMTE 119

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSID 422
           +  +   G +   ++     +   +  +G++ ++  +K                 ++  +
Sbjct: 120 LYKVPVAGGRTEQVLGTP-AELVCFDKTGKNFLYQDRKGFEDEWRKHHTSSITRDIWLYN 178

Query: 423 L-NGRNETLINTPAYASDPQWVG 444
              G++  L N      +P +  
Sbjct: 179 TQTGKHTNLTNRGGEDRNPVYAP 201



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 98/310 (31%), Gaps = 81/310 (26%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM------- 259
             +R      P ++P+   V + +  D     VY       +  K +  F++        
Sbjct: 187 LTNRGGEDRNPVYAPDGNAVYFLSERDGGSFNVYTFPLNTPQEVKAVTTFKTHPVRFLSV 246

Query: 260 ----------------------------------------------ILAPRFSSNGKRAL 273
                                                           +   S +GK+  
Sbjct: 247 SDKGTLCYTYDGELYTQKSGARPEKVKVELVRDDEQQLATLKFSQGATSASVSPDGKQVA 306

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM-- 331
             V+ D    ++        T+++TNT     + S++PD+  +V+ S+R G  QLY    
Sbjct: 307 FIVRGD----VFVTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASERTGNWQLYTAKI 362

Query: 332 ---------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                     +   +++ +   K      P +SP G  +AF +       + V+     +
Sbjct: 363 SRKEDPNFPNATLIEEEVLLPSKTVERAYPQYSPDGKELAFIEDRN---RLMVLNLKTKK 419

Query: 383 ERLLVEDSNLQ------APTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            R + + S            WSP G+   L F   +  D  S +  +   G   T +   
Sbjct: 420 VRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRH-DPYSDVGIVSAQGGATTNLTNS 478

Query: 435 AYAS-DPQWV 443
            Y S  P+WV
Sbjct: 479 GYISGAPRWV 488



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 76/215 (35%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++VA+    D        + +      K+I N  +   A  F+ + +  + + +
Sbjct: 297 SVSPDGKQVAFIVRGD------VFVTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASE 350

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS------------ASYSPDSSQIVFESDREGK 325
           +     +Y+  +         N   I                 YSPD  ++ F  DR   
Sbjct: 351 RTGNWQLYTAKISRKEDPNFPNATLIEEEVLLPSKTVERAYPQYSPDGKELAFIEDR--- 407

Query: 326 EQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  +G++  
Sbjct: 408 NRLMVLNLKTKKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDVGIVSA 467

Query: 379 DGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G     L     +  AP W   G +++F  ++ G
Sbjct: 468 QGGATTNLTNSGYISGAPRWVLDGNAILFQTERYG 502



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 81/234 (34%), Gaps = 32/234 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +   +++M      
Sbjct: 17  YKGDIYKVPAQGGTAVQLTTQTS-YEANPVWSPDGKQIAFASDRNGN-FDIFIMPAD-GG 73

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERL 297
           A +R+    +  +   F+ +GK    S                  ++Y V +    TE++
Sbjct: 74  AARRLTYHSASEIPSAFTPDGKYVFFSASIQDPASSALFPTGAMTELYKVPVAGGRTEQV 133

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  +       ++  
Sbjct: 134 LGTPAELV--CFDKTGKNFLYQ-DRKGFEDEWRKHHTSSITRDIWLYNTQTGKHTNLTNR 190

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 +PV++P G+ + F ++  G  F +     +  QE   V         +
Sbjct: 191 G-GEDRNPVYAPDGNAVYFLSERDGGSFNVYTFPLNTPQEVKAVTTFKTHPVRF 243



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 86/220 (39%), Gaps = 22/220 (10%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK     V   ++ V        K+  ++PA    ++    +      +   G+
Sbjct: 296 ASVSPDGKQVAFIVRGDVF-VTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASERTGN 354

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +      +S          +L            L PS+      P++SP+ +++A+    
Sbjct: 355 WQLYTAKISRKEDPNFPNATLI-------EEEVLLPSKTVERAYPQYSPDGKELAFI--- 404

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRA---LISVQKDEAMDI 284
            ED  R+ +++ +  +  +++ +              +S +GK      I  + D   D+
Sbjct: 405 -EDRNRLMVLNLKT-KKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDV 462

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
             V  Q  AT  LTN+ +I+ +  +  D + I+F+++R G
Sbjct: 463 GIVSAQGGATTNLTNSGYISGAPRWVLDGNAILFQTERYG 502


>gi|224538045|ref|ZP_03678584.1| hypothetical protein BACCELL_02934 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520335|gb|EEF89440.1| hypothetical protein BACCELL_02934 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 1066

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 84/231 (36%), Gaps = 36/231 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++ +      DI +V         A  ++    S    P +S +GK+   +  +
Sbjct: 30  ISPDGTEIVFCY--KGDIYKV----PTEGGAATQLTTQDSYECTPVWSPDGKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGK--------EQ 327
           +   DI+ +        RLT      + A+++PD   I+F +   D  G          +
Sbjct: 84  NGNFDIFVMPANGGTARRLTTHSTNEVPATFTPDGKYILFSASIQDPAGSALFPSAAMTE 143

Query: 328 LYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEK------------FAIG 374
           LY + S G   +++     EA  FD      G+   +    G +              + 
Sbjct: 144 LYKVPSVGGRTEQVLGTPAEAVCFDKS----GNRFFYQDRKGGENEWRKHHTSSITRDVW 199

Query: 375 VMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +          L       + P  SP G+++ F  +++G +   +YS  ++
Sbjct: 200 MYDTKTGSHTNLTQHAGEDRNPIVSPDGQTVYFLSERNGGS-FNVYSFPIS 249



 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 22/157 (14%)

Query: 298 TNTLFINISASY------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           T       +  +      SPD ++IVF      K  +Y + + G    +++         
Sbjct: 13  TAITSYATTPLWMRDVQISPDGTEIVFCY----KGDIYKVPTEGGAATQLTTQDSYECT- 67

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKK 410
           PVWSP G  IAF       F I VM  +G   R L   S  + P T++P G+ ++FS   
Sbjct: 68  PVWSPDGKQIAFASDRNGNFDIFVMPANGGTARRLTTHSTNEVPATFTPDGKYILFSASI 127

Query: 411 DGDTGS---------KLYSI-DLNGRNETLINTPAYA 437
               GS         +LY +  + GR E ++ TPA A
Sbjct: 128 QDPAGSALFPSAAMTELYKVPSVGGRTEQVLGTPAEA 164



 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 105/293 (35%), Gaps = 35/293 (11%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ------QKVAYAT 230
           + F+SE         S  +      +I+ +T  +   +     S +           Y  
Sbjct: 230 VYFLSERNGGSFNVYSFPISQP--QSIKTITSFKTHPVRFLSMSNDGTLCYGYDSEIYTQ 287

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            +  +  ++ +   R D+       +     +   S +GK+   +V+     +++     
Sbjct: 288 QEGSNPRKINVEIIRDDQPQIAYLKYPDKATSATVSPDGKQIAFTVRG----EVFVTSAD 343

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM------QSNGSDQKRISQD 344
              T+++T+T       S++PD+  + + S+R G  Q+Y+         N  +   I ++
Sbjct: 344 YATTKQITHTAAEEDGLSFAPDNRTLAYASERNGNWQIYLAKIVREEDPNFPNATLIKEE 403

Query: 345 -----KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA----- 394
                       P +SP G  +AF +       + V+  +  + R + + S   +     
Sbjct: 404 VLLPSTTVERSHPQFSPDGKELAFIEDRN---RLMVLNLETKKVRRITDGSTWYSTGGGF 460

Query: 395 -PTWSPSGRS--LIFSRKKDGD-TGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              WSP G+   L F   K    +   L S   NG    L N+   +  P +V
Sbjct: 461 DYAWSPDGKWFTLEFIGNKHDPYSDIGLVSAQGNGEIVNLTNSGYTSGSPSFV 513



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 81/211 (38%), Gaps = 32/211 (15%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +  +G     LT  +D     P +SP+ +++A+A+  + +   +++M      
Sbjct: 41  YKGDIYKVPTEGGAATQLTT-QDSYECTPVWSPDGKQIAFASDRNGN-FDIFVMPAN-GG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATERL 297
             +R+    +  +   F+ +GK  L S    +             ++Y V      TE++
Sbjct: 98  TARRLTTHSTNEVPATFTPDGKYILFSASIQDPAGSALFPSAAMTELYKVPSVGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQ-------------LYVMQSNGSDQKRISQD 344
             T    +   +    ++  ++ DR+G E              +++  +       ++Q 
Sbjct: 158 LGTPAEAV--CFDKSGNRFFYQ-DRKGGENEWRKHHTSSITRDVWMYDTKTGSHTNLTQ- 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIG 374
                 +P+ SP G  + F ++ +G  F + 
Sbjct: 214 HAGEDRNPIVSPDGQTVYFLSERNGGSFNVY 244



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 61/341 (17%), Positives = 121/341 (35%), Gaps = 39/341 (11%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK     V   ++ V        K+   + A    ++    +      +   G+
Sbjct: 320 ATVSPDGKQIAFTVRGEVF-VTSADYATTKQITHTAAEEDGLSFAPDNRTLAYASERNGN 378

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +   +  +           +L            L PS       P+FSP+ +++A+    
Sbjct: 379 WQIYLAKIVREEDPNFPNATLI-------KEEVLLPSTTVERSHPQFSPDGKELAFI--- 428

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKR--ALISVQK-DEAMDI 284
            ED  R+ +++    +  +RI +              +S +GK         K D   DI
Sbjct: 429 -EDRNRLMVLNLET-KKVRRITDGSTWYSTGGGFDYAWSPDGKWFTLEFIGNKHDPYSDI 486

Query: 285 YSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG-----------KEQLYVMQ 332
             V  Q       LTN+ + + S S+  D + I+F ++R G              L  + 
Sbjct: 487 GLVSAQGNGEIVNLTNSGYTSGSPSFVLDGNAILFITERYGMRAHASWGSLDDAMLVFLN 546

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSN 391
            +  D+  +S++    Y +   +     IA    S  +   + +   +    RL    SN
Sbjct: 547 QDAYDKFSLSKEDYELYKEA--NSDRKKIADKDSSKVKDVVVELKNIEDRIVRLTPNSSN 604

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + +   S  G++L +    +G  G  L+ +DL  +   L++
Sbjct: 605 MGSTLISKDGKTLYYLASAEG--GRNLWKMDLRKKETKLLH 643


>gi|285808309|gb|ADC35840.1| peptidase S9 prolyl oligopeptidase [uncultured bacterium 89]
          Length = 689

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 104/300 (34%), Gaps = 35/300 (11%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             GDF       +       ++ ++ ++  DG   R L   R      P  SP  ++VA+
Sbjct: 94  RGGDFERTAEAPNPRSNPEGVEQAVFLIRADGGEPRRLGEGR-----APAVSPKGERVAF 148

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                 +  +++ +       P +  + R    +  +S +G R      +     I   D
Sbjct: 149 L-----NKGQIWWVAIEGSDKPAQAVHARGNAHSLHWSPDGSRLAFVSDRGNHSFIGVFD 203

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESD------------REGKE-QLYVMQSNG 335
             + +   L  ++ ++    +SPDS Q+ F               R G+   + V  +  
Sbjct: 204 PAAKSLRYLDPSVDLDSQPVWSPDSKQVAFIRSAASQDATVFGPKRSGQPWSVRVADAAS 263

Query: 336 SDQKRISQ--DKEASYFDPVWSPQ------GDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
              +++    +   S F  V + Q      GD++ F         +  +   G     L 
Sbjct: 264 GAGRQVWHAEEGRGSLFHAVVASQQLIWMAGDILVFPWERDGWVHLYSVPLAGGMVTQLT 323

Query: 388 ED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                ++  + SP G+ +++S  +       ++ + ++G   + + +       +W   M
Sbjct: 324 PGEFEVEHVSPSPGGKEVLYSSNQGDIDRRHIWKVAVSGGRPSPVTSGGGI---EWSPVM 380



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 67/211 (31%), Gaps = 31/211 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRALIS 275
           +P    VA+         R     +    + +++ ++            ++ +G+  +  
Sbjct: 36  APAGGGVAWIVSA--KGARNIWTASPPAYSGRQVTSYTQDDGQEINEITWTPDGRTIVYV 93

Query: 276 VQKDEAMD----------------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              D                    ++ +        RL          + SP   ++ F 
Sbjct: 94  RGGDFERTAEAPNPRSNPEGVEQAVFLIRADGGEPRRLGEGRA----PAVSPKGERVAFL 149

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +    K Q++ +   GSD+   +     +     WSP G  +AF    G    IGV    
Sbjct: 150 N----KGQIWWVAIEGSDKPAQAVHARGNAHSLHWSPDGSRLAFVSDRGNHSFIGVFDPA 205

Query: 380 GSQERLLVEDSNLQA-PTWSPSGRSLIFSRK 409
               R L    +L + P WSP  + + F R 
Sbjct: 206 AKSLRYLDPSVDLDSQPVWSPDSKQVAFIRS 236



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 53/158 (33%), Gaps = 34/158 (21%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---QDKEASYFDPVWSPQGDLIAFTKF 366
           +P    + +    +G   ++         ++++   QD      +  W+P G  I + + 
Sbjct: 36  APAGGGVAWIVSAKGARNIWTASPPAYSGRQVTSYTQDDGQEINEITWTPDGRTIVYVR- 94

Query: 367 SGEKFA------------------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            G  F                   + +++ DG + R L E     AP  SP G  + F  
Sbjct: 95  -GGDFERTAEAPNPRSNPEGVEQAVFLIRADGGEPRRLGEGR---APAVSPKGERVAFLN 150

Query: 409 KKDGDTGSKLYSIDLNG--RNETLINTPAYASDPQWVG 444
           K       +++ + + G  +    ++    A    W  
Sbjct: 151 K------GQIWWVAIEGSDKPAQAVHARGNAHSLHWSP 182



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 16/133 (12%), Positives = 35/133 (26%), Gaps = 4/133 (3%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-- 280
              + +    + D                ++      +     S  GK  L S  + +  
Sbjct: 294 GDILVFPW--ERDGWVHLYSVPLAGGMVTQLTPGEFEVEHVSPSPGGKEVLYSSNQGDID 351

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              I+ V +       +T+   I  S   + D   + F      +     ++      K 
Sbjct: 352 RRHIWKVAVSGGRPSPVTSGGGIEWSPVMTSDREAVAFLQSGARRPSHAAIRVGSGPVKE 411

Query: 341 ISQDKEASYFDPV 353
           ++     S F   
Sbjct: 412 LAPQTIPSEFPEA 424


>gi|120611748|ref|YP_971426.1| peptidase S9 prolyl oligopeptidase [Acidovorax citrulli AAC00-1]
 gi|120590212|gb|ABM33652.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Acidovorax citrulli AAC00-1]
          Length = 661

 Score =  116 bits (290), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 86/236 (36%), Gaps = 48/236 (20%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             AP  +    S    PR+S +GK+      +  +  ++ +        ++       +S
Sbjct: 54  GGAPWPLTGGTSTDNNPRWSPDGKQVAFISMRTGSSQVFVIARHGGEARQVGALDGTALS 113

Query: 307 ASYSPDSSQIV-----------------------------------FESDREGK-----E 326
           A +SPD   +                                    ++SD  G       
Sbjct: 114 AEWSPDGCSLAVLCTVAVDPELRGRRPGPDAPPPRTGGPRIVWRLPYKSDGLGYVLGQET 173

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGS 381
            L+V++ +    +R++ D   +     WSP G  IA  +       G +  +  ++ DG 
Sbjct: 174 HLFVLRVSDGQCRRLT-DGAFNVRAAAWSPDGRTIAMVRTRDSDTEGHRTDLWTLRADGG 232

Query: 382 QERLLVED-SNLQAPTWSPSGRSLIFSRKKD-GDTGSKLYSIDLNGRNETLINTPA 435
             R L +  + + +P WSP GR+++ S  +D GD   +L+  D  G     +  P+
Sbjct: 233 DARQLTDGLAQVLSPVWSPDGRTIVVSGSRDEGDALVRLWQCDAEGGRVEPLGDPS 288



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 98/279 (35%), Gaps = 55/279 (19%)

Query: 163 YQSITGEKGDFNSRILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           + SI G +G     +L  +   V+      ++SL  +  +G    +           PR+
Sbjct: 14  HHSIAGVQGSPTEELLVCTVERVNRAADRSESSLWCVPLEGGAP-WPLTGGTSTDNNPRW 72

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQ 277
           SP+ ++VA+ +           +  R     +++G      L+  +S +G    +  +V 
Sbjct: 73  SPDGKQVAFISMRTGS--SQVFVIARHGGEARQVGALDGTALSAEWSPDGCSLAVLCTVA 130

Query: 278 KD--------------------------------------EAMDIYSVDLQSNATERLTN 299
            D                                      +   ++ + +      RLT+
Sbjct: 131 VDPELRGRRPGPDAPPPRTGGPRIVWRLPYKSDGLGYVLGQETHLFVLRVSDGQCRRLTD 190

Query: 300 TLFINISASYSPDSSQIVFESDRE-----GKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             F   +A++SPD   I     R+      +  L+ ++++G D ++++ D  A    PVW
Sbjct: 191 GAFNVRAAAWSPDGRTIAMVRTRDSDTEGHRTDLWTLRADGGDARQLT-DGLAQVLSPVW 249

Query: 355 SPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDS 390
           SP G  I  +    E      +     +G +   L + S
Sbjct: 250 SPDGRTIVVSGSRDEGDALVRLWQCDAEGGRVEPLGDPS 288



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 77/207 (37%), Gaps = 46/207 (22%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++ V L+  A   LT     + +  +SPD  Q+ F S R G  Q++V+  +G + +++ 
Sbjct: 46  SLWCVPLEGGAPWPLTGGTSTDNNPRWSPDGKQVAFISMRTGSSQVFVIARHGGEARQV- 104

Query: 343 QDKEASYFDPVWSPQGDLIAFT----------------------------------KFSG 368
              + +     WSP G  +A                                    K  G
Sbjct: 105 GALDGTALSAEWSPDGCSLAVLCTVAVDPELRGRRPGPDAPPPRTGGPRIVWRLPYKSDG 164

Query: 369 EKF------AIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGS---KL 418
             +       + V++    Q R L +   N++A  WSP GR++   R +D DT      L
Sbjct: 165 LGYVLGQETHLFVLRVSDGQCRRLTDGAFNVRAAAWSPDGRTIAMVRTRDSDTEGHRTDL 224

Query: 419 YSIDLNGRNETLINTP-AYASDPQWVG 444
           +++  +G +   +    A    P W  
Sbjct: 225 WTLRADGGDARQLTDGLAQVLSPVWSP 251



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 62/157 (39%), Gaps = 14/157 (8%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-----EAMDIYSVDLQSNATERLTNT 300
            D   +R+ +    + A  +S +G+   +   +D        D++++        +LT+ 
Sbjct: 181 SDGQCRRLTDGAFNVRAAAWSPDGRTIAMVRTRDSDTEGHRTDLWTLRADGGDARQLTDG 240

Query: 301 LFINISASYSPDSSQIVFESDREGKE---QLYVMQSNGSDQKRISQ-----DKEASYFDP 352
           L   +S  +SPD   IV    R+  +   +L+   + G   + +         E S    
Sbjct: 241 LAQVLSPVWSPDGRTIVVSGSRDEGDALVRLWQCDAEGGRVEPLGDPSIEIGTETSSVRF 300

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V    G ++A     G   A+  +   G + R++VED
Sbjct: 301 VDGDPGRVLALLMRRG-VHAVASIAVPGGEVRVIVED 336



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 45/139 (32%), Gaps = 7/139 (5%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                  D  +  +  +    +   +  L  +  DG + R LT    Q+   P +SP+ +
Sbjct: 196 RAAAWSPDGRTIAMVRTRDSDTEGHRTDLWTLRADGGDARQLTDGLAQV-LSPVWSPDGR 254

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS----NGK--RALISVQK 278
            +  +   DE    V L     +          S+ +    SS    +G   R L  + +
Sbjct: 255 TIVVSGSRDEGDALVRLWQCDAEGGRVEPLGDPSIEIGTETSSVRFVDGDPGRVLALLMR 314

Query: 279 DEAMDIYSVDLQSNATERL 297
                + S+ +       +
Sbjct: 315 RGVHAVASIAVPGGEVRVI 333


>gi|85708709|ref|ZP_01039775.1| Acylaminoacyl-peptidase [Erythrobacter sp. NAP1]
 gi|85690243|gb|EAQ30246.1| Acylaminoacyl-peptidase [Erythrobacter sp. NAP1]
          Length = 706

 Score =  116 bits (290), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 99/322 (30%), Gaps = 59/322 (18%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF--EPRFSPNQQKVAYAT---- 230
           IL    S  S  +  +    +R G N R        I +  +P+ SP+   + Y      
Sbjct: 20  ILNAQTSEPSSEMSVTGKGSERTGPNSRLTGEDLFDIAYASDPQISPDGSTIIYTRRQSD 79

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              + ++             +            R+S +G R      ++    ++   + 
Sbjct: 80  IMTDRVVSSLWSIDVASGEERPFAGNDGAAFGARWSPDGSRVAYVSTENGGAQLWVKWMD 139

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFE--------------SDRE------------- 323
           S    +LT      +S ++SPD  QI +               S+R              
Sbjct: 140 SGEAVKLTGLPNSPMSITWSPDGRQISYVMMVDDNAPSLGSAPSNRPEGATWADALQITD 199

Query: 324 --------------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                         G E+++V+ + G   ++++           WS  G  + FT     
Sbjct: 200 LVNFRADGAGEITPGFEKIFVISATGGAPRQLTFGPNHDGGALSWSADGTKVFFTSNRNP 259

Query: 370 KFA-------IGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTG---SKL 418
            +        I  +         L   D     P  SP G  + +    D       +++
Sbjct: 260 DWQTDPVEADIWSVDTRTLALAQLTMRDGPDGGPLVSPDGSMIAYVGFDDEGRAYEQTEI 319

Query: 419 YSIDLNGRNETLINTPAYASDP 440
           Y +D +G N  L+ T ++   P
Sbjct: 320 YVMDADGSNSRLL-TGSWDFSP 340



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 98/292 (33%), Gaps = 64/292 (21%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           SR+ +VS           L V   D +                 +SP+ ++++Y    D+
Sbjct: 119 SRVAYVSTENGGA----QLWVKWMD-SGEAVKLTGLPNSPMSITWSPDGRQISYVMMVDD 173

Query: 235 DILRV---------------------------------------YLMDTRIDRAPKRIGN 255
           +   +                                         + +    AP+++  
Sbjct: 174 NAPSLGSAPSNRPEGATWADALQITDLVNFRADGAGEITPGFEKIFVISATGGAPRQLTF 233

Query: 256 FRSMILAP-RFSSNGKRALISVQKDEAM-------DIYSVDLQSNATERLTNTLFINISA 307
             +       +S++G +   +  ++          DI+SVD ++ A  +LT     +   
Sbjct: 234 GPNHDGGALSWSADGTKVFFTSNRNPDWQTDPVEADIWSVDTRTLALAQLTMRDGPDGGP 293

Query: 308 SYSPDSSQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             SPD S I +   D EG+     ++YVM ++GS+ + ++   + S     W      + 
Sbjct: 294 LVSPDGSMIAYVGFDDEGRAYEQTEIYVMDADGSNSRLLTGSWDFSPDAVEWDANSRALY 353

Query: 363 FTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAP----TWS-PSGRSLIFS 407
                  +  +  M  DGS   ++  V    L  P    ++S     ++ F+
Sbjct: 354 VQYDKRGETFVARMSLDGSVRDVVEGVSGGGLDRPYTGGSFSVADNGTIAFT 405


>gi|255015929|ref|ZP_05288055.1| putative Tricorn-like protease [Bacteroides sp. 2_1_7]
          Length = 1076

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 71/204 (34%), Gaps = 30/204 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G+    S Q D    IY+V        +LT     +    +SPD  +I F S+R 
Sbjct: 30  AISPDGQTIAFSYQGD----IYTVPSSGGKARQLTTHPAHDTRPVWSPDGQRIAFASNRS 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF-A 372
           G   +++M   G + KR++     + +   +   G  I +           +F G +F  
Sbjct: 86  GNFDIFLMNKEGGEPKRLTT-HSTNEYPTTFKDNG-HILYLANVLQDAKDIQFPGTRFMQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSID 422
           +  +  DG +   L     ++    S  G  L+++  K                 ++   
Sbjct: 144 VYEISTDGGRPD-LYSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSITRDIWLCT 202

Query: 423 L--NGRNETLINTPAYASDPQWVG 444
           L  +   + +        +P W  
Sbjct: 203 LGKDRSFQKVTTFGGEDRNPVWAA 226



 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 80/242 (33%), Gaps = 39/242 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ Q +A++     DI  V           +++    +    P +S +G+R   +  
Sbjct: 30  AISPDGQTIAFSY--QGDIYTV----PSSGGKARQLTTHPAHDTRPVWSPDGQRIAFASN 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------------FESDREGK 325
           +    DI+ ++ +    +RLT         ++  +   +             F   R   
Sbjct: 84  RSGNFDIFLMNKEGGEPKRLTTHSTNEYPTTFKDNGHILYLANVLQDAKDIQFPGTR--F 141

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAI 373
            Q+Y + ++G    R          +   S  G  + +               S     I
Sbjct: 142 MQVYEISTDGG---RPDLYSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSITRDI 198

Query: 374 GVMKK--DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +     D S +++       + P W+  G S  +  ++ G     ++  DL G +E  I
Sbjct: 199 WLCTLGKDRSFQKVTTFGGEDRNPVWAADGASFYYLSEEKGSF--NIFKKDLAGNSEKQI 256

Query: 432 NT 433
            T
Sbjct: 257 TT 258



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 57/305 (18%), Positives = 116/305 (38%), Gaps = 46/305 (15%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ EKG FN     + +  ++G  +  +         +R+LT      L    +S +
Sbjct: 231 FYYLSEEKGSFN-----IFKKDLAGNSEKQITT--HTTHPVRFLTSDNTGTLC---YSYD 280

Query: 223 QQKVAYATYDDEDILRVYLM----DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            +   Y   + +   +V +         D   + + +  + I     S NGK      + 
Sbjct: 281 GE--IYTVKEGQKPAKVNIQIVADKIENDVIHRLLTDGATDI---AVSPNGKEVAFITRG 335

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D    +Y   ++   T ++TNT     +  +SPD   +V+ ++REG   +Y  +    + 
Sbjct: 336 D----VYVTSIEYETTRQITNTPQQERNIDFSPDGRSLVYSAEREGTWGIYESKLTRDED 391

Query: 339 KRISQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           K+ +   E           + F P++SP G+ +AF +       + V+ +   Q R +++
Sbjct: 392 KQFTYAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLENRTT---LRVINRKTKQVRTVLD 448

Query: 389 DSNLQAPT-------WSPSGRSLIFSRKKDGDTGS---KLYSIDLNGRNETLINTPAYAS 438
              L + +       WSP  +  +      G   +    L   D +G    L  +     
Sbjct: 449 GKYLYSYSDGDQHFQWSPDSKWFLVDYISVGGWNNTDIALVKADGSGEVTNLTESGYSDG 508

Query: 439 DPQWV 443
           D +WV
Sbjct: 509 DAKWV 513



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 85/237 (35%), Gaps = 37/237 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN ++VA+ T  D     VY+         ++I N         FS +G+  + S +
Sbjct: 321 AVSPNGKEVAFITRGD-----VYVTSIEY-ETTRQITNTPQQERNIDFSPDGRSLVYSAE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTL---------FINIS--ASYSPDSSQIVFESDREGKE 326
           ++    IY   L  +  ++ T                S    YSPD +++ F  +R    
Sbjct: 375 REGTWGIYESKLTRDEDKQFTYAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLENRT--- 431

Query: 327 QLYVMQSNGSDQKRISQDKE-ASYFDPV----WSPQGDL--IAFTKFSG-EKFAIGVMKK 378
            L V+       + +   K   SY D      WSP      + +    G     I ++K 
Sbjct: 432 TLRVINRKTKQVRTVLDGKYLYSYSDGDQHFQWSPDSKWFLVDYISVGGWNNTDIALVKA 491

Query: 379 DGSQE-RLLVEDSNLQAPT-WSPSGRSLIFSRKKDG-------DTGSKLYSIDLNGR 426
           DGS E   L E         W   G+++I+S  + G            +Y +  +G 
Sbjct: 492 DGSGEVTNLTESGYSDGDAKWVLDGKAMIWSSDRAGFRSHGSWGAERDVYIMFFDGE 548



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 89/257 (34%), Gaps = 42/257 (16%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILR------- 238
           G     +  +  DG             +     S +  K+ Y  Y   ED  R       
Sbjct: 138 GTRFMQVYEISTDGGRPDL---YSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSI 194

Query: 239 ---VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              ++L     DR+ +++  F      P ++++G       ++  + +I+  DL  N+ +
Sbjct: 195 TRDIWLCTLGKDRSFQKVTTFGGEDRNPVWAADGASFYYLSEEKGSFNIFKKDLAGNSEK 254

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK---------------- 339
           ++T      +    S ++  + +  D     ++Y ++      K                
Sbjct: 255 QITTHTTHPVRFLTSDNTGTLCYSYD----GEIYTVKEGQKPAKVNIQIVADKIENDVIH 310

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWS 398
           R+  D      D   SP G  +AF         + V   +    R +      +    +S
Sbjct: 311 RLLTDG---ATDIAVSPNGKEVAFITRGD----VYVTSIEYETTRQITNTPQQERNIDFS 363

Query: 399 PSGRSLIFSRKKDGDTG 415
           P GRSL++S +++G  G
Sbjct: 364 PDGRSLVYSAEREGTWG 380



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 7/83 (8%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKK 410
              SP G  IAF+        I  +   G + R L    ++   P WSP G+ + F+  +
Sbjct: 29  CAISPDGQTIAFSYQGD----IYTVPSSGGKARQLTTHPAHDTRPVWSPDGQRIAFASNR 84

Query: 411 DGDTGSKLYSIDLNGRNETLINT 433
            G+    ++ ++  G     + T
Sbjct: 85  SGNF--DIFLMNKEGGEPKRLTT 105



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 82/230 (35%), Gaps = 33/230 (14%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  +  +   G   R LT         P +SP+ Q++A+A+    +   ++LM+ +  
Sbjct: 41  SYQGDIYTVPSSGGKARQLTTHPAH-DTRPVWSPDGQRIAFASNRSGN-FDIFLMN-KEG 97

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI----------YSVDLQSNATERL 297
             PKR+    +      F  NG    ++    +A DI          Y +       +  
Sbjct: 98  GEPKRLTTHSTNEYPTTFKDNGHILYLANVLQDAKDIQFPGTRFMQVYEISTDGGRPDLY 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLY---------------VMQSNGSDQKRIS 342
           ++    NI  + S D S++++  D +G E  +                +  + S QK  +
Sbjct: 158 SSLYMENI--ALSKDGSKLLYN-DYKGYEDPWRKHHQSSITRDIWLCTLGKDRSFQKVTT 214

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
              E    +PVW+  G    +       F I      G+ E+ +   +  
Sbjct: 215 FGGE--DRNPVWAADGASFYYLSEEKGSFNIFKKDLAGNSEKQITTHTTH 262



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 14/141 (9%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             Q  F+P +SP+  +VA+        ++       R     K + ++       ++S +
Sbjct: 408 SGQTSFQPLYSPDGNEVAFLENRTTLRVINRKTKQVRTVLDGKYLYSYSDGDQHFQWSPD 467

Query: 269 GKRALI---SVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG 324
            K  L+   SV      DI  V          LT + + +  A +  D   +++ SDR G
Sbjct: 468 SKWFLVDYISVGGWNNTDIALVKADGSGEVTNLTESGYSDGDAKWVLDGKAMIWSSDRAG 527

Query: 325 ---------KEQLYVMQSNGS 336
                    +  +Y+M  +G 
Sbjct: 528 FRSHGSWGAERDVYIMFFDGE 548


>gi|325920630|ref|ZP_08182542.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas gardneri ATCC 19865]
 gi|325548886|gb|EGD19828.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas gardneri ATCC 19865]
          Length = 778

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 51/234 (21%), Positives = 94/234 (40%), Gaps = 11/234 (4%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               +  +       P  SP+   VAYA+   +      L+ T  +  P+ +    + I 
Sbjct: 215 RPYQIITAGGGFDLTPSLSPDGAMVAYASLTSDRAGTSILVKTTNNAYPRVLDTPAAGIS 274

Query: 262 A--PRFSSNGKRALISVQK-DEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQI 316
              P +S +G+    S Q  D +  I        A  R  +       +S S+SPD   +
Sbjct: 275 DRLPAWSPDGREIAFSRQAPDGSCRIMIAAANGPAAAREVVRCDGADMLSFSWSPDGRGL 334

Query: 317 VFESDRE--GKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +F S     G  ++  +       + +  S   +   + P +SP G  I F +       
Sbjct: 335 LFGSMTGAHGAPRIRRLDLETGQWQPLVYSAQPQDFDYAPRYSPDGHWIVFLRNPQLGDL 394

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             +    G+ ERL  ++++++  +W P G  +IF R+ D +  ++LY +DL  R
Sbjct: 395 WRIPATGGTAERLTHDNADIRGWSWLPDGSGVIFGRRVDSE--ARLYRLDLRDR 446



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 92/281 (32%), Gaps = 57/281 (20%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALIS 275
           P +SP+ +++A++    +   R+ +       A + +       + +  +S +G+  L  
Sbjct: 278 PAWSPDGREIAFSRQAPDGSCRIMIAAANGPAAAREVVRCDGADMLSFSWSPDGRGLLFG 337

Query: 276 VQKD--EAMDIYSVDLQSNATERLTNTL---FINISASYSPDSSQIVFESDREGKEQLYV 330
                  A  I  +DL++   + L  +      + +  YSPD   IVF  + +    L+ 
Sbjct: 338 SMTGAHGAPRIRRLDLETGQWQPLVYSAQPQDFDYAPRYSPDGHWIVFLRNPQ-LGDLWR 396

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK------------ 378
           + + G   +R++ D  A      W P G  + F +    +  +  +              
Sbjct: 397 IPATGGTAERLTHD-NADIRGWSWLPDGSGVIFGRRVDSEARLYRLDLRDRSLHDLGVDD 455

Query: 379 ------------------------------DGS--QERLLVEDSNLQAPTWSPSGRSLIF 406
                                         +G   + RL         P  +P GR LIF
Sbjct: 456 AQAPDVAHDHLVFVQRKPQFGVYQVIRDPMNGGYIRRRLFPSSGRDDQPMIAPDGRQLIF 515

Query: 407 SRKKDGDTGSKLYSIDLNGR---NETLINTPAYASDPQWVG 444
           +  + G  G     +   G     E L      A+D  W  
Sbjct: 516 ASNRSGAYGLWWGDVGKPGSVRLIEGLRPDSRQAAD--WSA 554



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 87/292 (29%), Gaps = 52/292 (17%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-ED 235
           +LF S +   G  +     ++         +       + PR+SP+   + +       D
Sbjct: 334 LLFGSMTGAHGAPRIRRLDLETGQWQPLVYSAQPQDFDYAPRYSPDGHWIVFLRNPQLGD 393

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT- 294
           + R+           +R+ +  + I    +  +G   +   + D    +Y +DL+  +  
Sbjct: 394 LWRI----PATGGTAERLTHDNADIRGWSWLPDGSGVIFGRRVDSEARLYRLDLRDRSLH 449

Query: 295 ------------------------------------------ERLTNTLFINISASYSPD 312
                                                      RL  +   +     +PD
Sbjct: 450 DLGVDDAQAPDVAHDHLVFVQRKPQFGVYQVIRDPMNGGYIRRRLFPSSGRDDQPMIAPD 509

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKF 371
             Q++F S+R G   L+          R+ +  +  S     WS     +  +    +  
Sbjct: 510 GRQLIFASNRSGAYGLWWGDVGKPGSVRLIEGLRPDSRQAADWSADSQHVLVSGSDADGH 569

Query: 372 A--IGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
           A    V    G   RL V           P   + L+ +  +DG T + LY 
Sbjct: 570 AALFEVTPSSGKVVRLPVPQPRPLQAIHLPDPNQLLVLAAAEDGHTFATLYD 621



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 21/63 (33%), Gaps = 3/63 (4%)

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA---YASDPQ 441
           +         P+ SP G  + ++       G+ +     N     +++TPA       P 
Sbjct: 220 ITAGGGFDLTPSLSPDGAMVAYASLTSDRAGTSILVKTTNNAYPRVLDTPAAGISDRLPA 279

Query: 442 WVG 444
           W  
Sbjct: 280 WSP 282


>gi|332662796|ref|YP_004445584.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
 gi|332331610|gb|AEE48711.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
          Length = 1069

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 70/197 (35%), Gaps = 22/197 (11%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            P  +++G +   S Q D    I++V        RLT       +  YSPD  +I F   
Sbjct: 27  HPAINNDGSQIAFSFQGD----IWTVASSGGKATRLTIHEAYEGNPMYSPDGKKIAFSGA 82

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----KFSGEKFAIGVM 376
           R G   ++VM + G   KR++           W+     I F+     +  G    I  +
Sbjct: 83  RYGNNDVFVMPAEGGSPKRLTYHSAGDNVAG-WASNSQ-IVFSTNREFRQIGGHPEIYGI 140

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLYSIDL-NGR 426
              G  E  L+ D     P++SP GR +          F     G    +++  D  N +
Sbjct: 141 NASGGTESRLL-DIEAYDPSYSPDGRFIALVRGSINPVFREDYKGSANREIWIYDTRNKK 199

Query: 427 NETLINTPAYASDPQWV 443
              L         P+W 
Sbjct: 200 YNKLPLFNTNDILPRWG 216



 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/246 (21%), Positives = 99/246 (40%), Gaps = 36/246 (14%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            + +L  P  + +  ++A++     DI  V            R+    +    P +S +G
Sbjct: 21  SNLLLRHPAINNDGSQIAFSF--QGDIWTV----ASSGGKATRLTIHEAYEGNPMYSPDG 74

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-----EG 324
           K+   S  +    D++ +  +  + +RLT     +  A ++ + SQIVF ++R      G
Sbjct: 75  KKIAFSGARYGNNDVFVMPAEGGSPKRLTYHSAGDNVAGWASN-SQIVFSTNREFRQIGG 133

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----------GEKFAI 373
             ++Y + ++G  + R+    +   +DP +SP G  IA  + S                I
Sbjct: 134 HPEIYGINASGGTESRLL---DIEAYDPSYSPDGRFIALVRGSINPVFREDYKGSANREI 190

Query: 374 GVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN------GR 426
            +      +  +L + ++N   P W  + R+L F   + G     LY I+LN      G 
Sbjct: 191 WIYDTRNKKYNKLPLFNTNDILPRWG-NNRTLYFLSSEAGT--YNLYRINLNENGQAQGG 247

Query: 427 NETLIN 432
            E L  
Sbjct: 248 PEKLTT 253



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 55/304 (18%), Positives = 116/304 (38%), Gaps = 30/304 (9%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           I    G+  +     SE+    + + +L    +       LT  +D+ +     S +   
Sbjct: 211 ILPRWGNNRTLYFLSSEAGTYNLYRINLNENGQAQGGPEKLTTFKDEAIRHFSISSDGST 270

Query: 226 VAY--------ATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISV 276
           + +                 ++ +  +  DR  P+ +    +       S NGK    S+
Sbjct: 271 IVFEKDMNLYLLKAGKGAGTKINVQISADDRFDPEELKTLSTGGSELAISPNGKLMAYSI 330

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNG 335
           +    + I   D + N +  +++    +++ ++  D + +VF SDR +G  + Y+++S  
Sbjct: 331 R--GEVFIKEADKEKNRSVNVSDHPNRDMNPTWLSD-TSLVFCSDRADGNFEFYMLRSAD 387

Query: 336 SDQK-----------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQ 382
             +            R++Q KE     PV S  G  IA+++  G+   +  +  DG  S 
Sbjct: 388 RSEPNPFKSLKHELIRLTQTKE-DESSPVVSSDGKKIAYSRGRGDLI-VADIASDGKLSN 445

Query: 383 ERLLVEDS-NLQAPTWSPSGRSLIFS-RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           E++LV+        +WSP  + L +S      +    +++ D +     +   P     P
Sbjct: 446 EKVLVDGWAGANGVSWSPDNKWLAYSMTDLYFNNEVFIHAADNSKPAVNVTMHPRTDGQP 505

Query: 441 QWVG 444
            W  
Sbjct: 506 FWSA 509



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 79/240 (32%), Gaps = 22/240 (9%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D   ++ L+    ++      SPN + +AY+       + +   D   +R+   + +  
Sbjct: 302 FDPEELKTLSTGGSEL----AISPNGKLMAYS---IRGEVFIKEADKEKNRSVN-VSDHP 353

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-----------RLTNTLFINIS 306
           +  + P + S+      S + D   + Y +     +             RLT T     S
Sbjct: 354 NRDMNPTWLSDTSLVFCSDRADGNFEFYMLRSADRSEPNPFKSLKHELIRLTQTKEDESS 413

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              S D  +I +   R       +        +++  D  A      WSP    +A++  
Sbjct: 414 PVVSSDGKKIAYSRGRGDLIVADIASDGKLSNEKVLVDGWAGANGVSWSPDNKWLAYSMT 473

Query: 367 S---GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 +  I           + +       P WS  G  L F  +++ +  + ++ + L
Sbjct: 474 DLYFNNEVFIHAADNSKPAVNVTMHPRTDGQPFWSADGSKLGFISERNNNRNADVWFVWL 533



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 92/287 (32%), Gaps = 15/287 (5%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR-------YLTPSRDQILFEPRF 219
                  ++ ++F S+          L   DR   N                +    P  
Sbjct: 357 MNPTWLSDTSLVFCSDRADGNFEFYMLRSADRSEPNPFKSLKHELIRLTQTKEDESSPVV 416

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK- 278
           S + +K+AY +    D++   +         K + +  +      +S + K    S+   
Sbjct: 417 SSDGKKIAY-SRGRGDLIVADIASDGKLSNEKVLVDGWAGANGVSWSPDNKWLAYSMTDL 475

Query: 279 --DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSN 334
             +  + I++ D  S     +T     +    +S D S++ F S+R       ++ +   
Sbjct: 476 YFNNEVFIHAAD-NSKPAVNVTMHPRTDGQPFWSADGSKLGFISERNNNRNADVWFVWLK 534

Query: 335 GSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             D +++SQD  E        +  G   A  K   +   I          ++     +  
Sbjct: 535 KEDWEKVSQDWLEKDGPAEGAAAPGGARANAKAEPKPVQIDFADIHERVVQVTSFAGDEG 594

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             T S  G++  ++       G  LYSI  +G++   I         
Sbjct: 595 NVTISKDGQTFFYTGNSSTARGRDLYSIKWDGKDLKEITRGGSNPFG 641



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 95/292 (32%), Gaps = 49/292 (16%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDT 244
              N + VM  +G + + LT           ++ N Q V     +   I     +Y ++ 
Sbjct: 84  YGNNDVFVMPAEGGSPKRLTYHSAGDNVA-GWASNSQIVFSTNREFRQIGGHPEIYGINA 142

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALIS-----------VQKDEAMDIYSVDLQSNA 293
                 + +         P +S +G+   +             +     +I+  D ++  
Sbjct: 143 SGGTESRLL---DIEAYDPSYSPDGRFIALVRGSINPVFREDYKGSANREIWIYDTRNKK 199

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-----SDQKRISQDKEAS 348
             +L      +I   +  ++  + F S   G   LY +  N         ++++  K+ +
Sbjct: 200 YNKLPLFNTNDILPRWG-NNRTLYFLSSEAGTYNLYRINLNENGQAQGGPEKLTTFKDEA 258

Query: 349 YFDPVWSPQGDLIAFTKF---------SGEKFAIGVM-----KKDGSQERLLVEDSNLQA 394
                 S  G  I F K           G    I V      + D  + + L    +  A
Sbjct: 259 IRHFSISSDGSTIVFEKDMNLYLLKAGKGAGTKINVQISADDRFDPEELKTLSTGGSELA 318

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT---PAYASDPQWV 443
              SP+G+ + +S +       +++  + +      +N    P    +P W+
Sbjct: 319 --ISPNGKLMAYSIR------GEVFIKEADKEKNRSVNVSDHPNRDMNPTWL 362



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 77/258 (29%), Gaps = 56/258 (21%)

Query: 165 SITGEKGDFNSRILFVSESVVS-GIIKNSLCVMD--RDG--ANIRYLTPSRDQILFEPRF 219
            +T  K D +S ++      ++    +  L V D   DG  +N + L            +
Sbjct: 403 RLTQTKEDESSPVVSSDGKKIAYSRGRGDLIVADIASDGKLSNEKVLVDGWAGANGV-SW 461

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +AY+  D      V++      +    +         P +S++G +     +++
Sbjct: 462 SPDNKWLAYSMTDLYFNNEVFIHAADNSKPAVNVTMHPRTDGQPFWSADGSKLGFISERN 521

Query: 280 EA---------------------------------------------MDIYSVDLQSNAT 294
                                                               +D      
Sbjct: 522 NNRNADVWFVWLKKEDWEKVSQDWLEKDGPAEGAAAPGGARANAKAEPKPVQIDFADIHE 581

Query: 295 E--RLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              ++T+      + + S D     +   S       LY ++ +G D K I++    + F
Sbjct: 582 RVVQVTSFAGDEGNVTISKDGQTFFYTGNSSTARGRDLYSIKWDGKDLKEITRGGS-NPF 640

Query: 351 DPVWSPQGDLIAFTKFSG 368
                 +G  I +T+  G
Sbjct: 641 GLQMDREGKYIYYTRQGG 658


>gi|17225204|gb|AAL37298.1|AF323582_1 beta transducin-like protein HET-E2C [Podospora anserina]
          Length = 1356

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 90/266 (33%), Gaps = 19/266 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 980  QRVASGSGDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQRVASGSDDK----TIKI 1035

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             DT      + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 1036 WDTASGTCTQTLEGHGGWVWSVAFSPDGQRVA-SGSIDGTIKIW--DAASGTCTQTLEGH 1092

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   SD      + +  +      +  +    S +   +SP G  
Sbjct: 1093 GDWVQSVAFSPDGQRVASGSD---DHTIKIWDAASGTCTQTLEGHGDSVWSVAFSPDGQR 1149

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A     G    I +           +E     + +  +SP G+ +  S   DG    K+
Sbjct: 1150 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGT--IKI 1203

Query: 419  YSIDLNGRNETLINTPAYASDPQWVG 444
            +        +TL     +     +  
Sbjct: 1204 WDAASGTCTQTLEGHGGWVHSVAFSP 1229



 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 89/265 (33%), Gaps = 23/265 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 896  QRVASGSDDKTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDK----TIKI 951

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             DT      + +      + +  FS +G+R   S   D+ + I+  D  S    +     
Sbjct: 952  WDTASGTGTQTLEGHGGSVWSVAFSPDGQRVA-SGSGDKTIKIW--DTASGTCTQTLEGH 1008

Query: 302  FINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              ++ S ++SPD  ++   SD    + + +  +      +  +      +   +SP G  
Sbjct: 1009 GNSVWSVAFSPDGQRVASGSD---DKTIKIWDTASGTCTQTLEGHGGWVWSVAFSPDGQR 1065

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKL 418
            +A     G    I +           +E       +  +SP G+ +        D   K+
Sbjct: 1066 VASGSIDGT---IKIWDAASGTCTQTLEGHGDWVQSVAFSPDGQRVASGSD---DHTIKI 1119

Query: 419  YSIDLNGRNETLINTPAYASDPQWV 443
            +    +  + T   T     D  W 
Sbjct: 1120 W----DAASGTCTQTLEGHGDSVWS 1140



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 93/264 (35%), Gaps = 15/264 (5%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 854  QRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVASGSDDK----TIKI 909

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +    S +L+  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 910  WDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA-SGSGDKTIKIW--DTASGTGTQTLEGH 966

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  
Sbjct: 967  GGSVWSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQR 1023

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +A +    +   I         + L      + +  +SP G+ +  S   DG    K++ 
Sbjct: 1024 VA-SGSDDKTIKIWDTASGTCTQTLEGHGGWVWSVAFSPDGQRVA-SGSIDGT--IKIWD 1079

Query: 421  IDLNGRNETLINTPAYASDPQWVG 444
                   +TL     +     +  
Sbjct: 1080 AASGTCTQTLEGHGDWVQSVAFSP 1103



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 82/252 (32%), Gaps = 19/252 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 1022 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVWSVAFSPDGQRVASGSIDG----TIKI 1077

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 1078 WDAASGTCTQTLEGHGDWVQSVAFSPDGQRVA-SGSDDHTIKIW--DAASGTCTQTLEGH 1134

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   S       + +  +      +  +          +SP G  
Sbjct: 1135 GDSVWSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQR 1191

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A     G    I +           +E     + +  +SP G+ +        D   K+
Sbjct: 1192 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA---SGSSDNTIKI 1245

Query: 419  YSIDLNGRNETL 430
            +        +TL
Sbjct: 1246 WDTASGTCTQTL 1257



 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 80/243 (32%), Gaps = 19/243 (7%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                     +    FSP+ Q+VA  + D      + + DT      + +      + +  
Sbjct: 835  QTLEGHGSSVLSVAFSPDGQRVASGSDDK----TIKIWDTASGTGTQTLEGHGGSVWSVA 890

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G+R   S   D+ + I+  D  S    + L       +S ++SPD  ++   S   
Sbjct: 891  FSPDGQRVA-SGSDDKTIKIW--DAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGS--- 944

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            G + + +  +      +  +    S +   +SP G  +A          I +        
Sbjct: 945  GDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVA---SGSGDKTIKIWDTASGTC 1001

Query: 384  RLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
               +E       +  +SP G+ +        D   K++        +TL     +     
Sbjct: 1002 TQTLEGHGNSVWSVAFSPDGQRVASGSD---DKTIKIWDTASGTCTQTLEGHGGWVWSVA 1058

Query: 442  WVG 444
            +  
Sbjct: 1059 FSP 1061



 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 92/256 (35%), Gaps = 23/256 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQQKV--AYATYDDED 235
               I+  L  + RDG   R+    R  I   P         F+P    +   +   +   
Sbjct: 762  GHTIRGRLIAIVRDGY--RFALSYRMIIEKAPLQAYTSALVFAPTDSMIKKIFKKEEPGW 819

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            I  + +++   +   + +    S +L+  FS +G+R   S   D+ + I+  D  S    
Sbjct: 820  ISTISVVEAEWNACTQTLEGHGSSVLSVAFSPDGQRVA-SGSDDKTIKIW--DTASGTGT 876

Query: 296  R-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            + L        S ++SPD  ++   SD    + + +  +      +  +   +S     +
Sbjct: 877  QTLEGHGGSVWSVAFSPDGQRVASGSD---DKTIKIWDAASGTCTQTLEGHGSSVLSVAF 933

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            SP G  +A +    +   I         + L     ++ +  +SP G+ +       GD 
Sbjct: 934  SPDGQRVA-SGSGDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVA---SGSGDK 989

Query: 415  GSKLYSIDLNGRNETL 430
              K++        +TL
Sbjct: 990  TIKIWDTASGTCTQTL 1005



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 68/220 (30%), Gaps = 16/220 (7%)

Query: 170  KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             G +   + F    + V SG I  ++ + D                +    FSP+ Q+VA
Sbjct: 1050 HGGWVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGDWVQSVAFSPDGQRVA 1109

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D      + + D       + +      + +  FS +G+R   S   D  + I+  
Sbjct: 1110 SGSDDH----TIKIWDAASGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSIDGTIKIW-- 1162

Query: 288  DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D  S    + L        S ++SPD  ++   S       + +  +      +  +   
Sbjct: 1163 DAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHG 1219

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                   +SP G  +A          I +           
Sbjct: 1220 GWVHSVAFSPDGQRVASGSSDNT---IKIWDTASGTCTQT 1256



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 63/199 (31%), Gaps = 26/199 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDR---KQIIG-----KKFFSSPASWRKIA----HTI-----S 159
             +     +    ++WD       + + G     +    SP   R  +    HTI     +
Sbjct: 1064 QRVASGSIDGTIKIWDAASGTCTQTLEGHGDWVQSVAFSPDGQRVASGSDDHTIKIWDAA 1123

Query: 160  DDIYQSITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                       GD    + F    + V SG I  ++ + D                +   
Sbjct: 1124 SGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSV 1183

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ Q+VA  + D      + + D       + +      + +  FS +G+R   S  
Sbjct: 1184 AFSPDGQRVASGSIDG----TIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGS 1238

Query: 278  KDEAMDIYSVDLQSNATER 296
             D  + I+  D  S    +
Sbjct: 1239 SDNTIKIW--DTASGTCTQ 1255


>gi|116624109|ref|YP_826265.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227271|gb|ABJ85980.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 880

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 79/230 (34%), Gaps = 6/230 (2%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+ ++   +                +  A + +         P  S +G+R   +   
Sbjct: 541 WAPDGRRSILSMEPAPGSWAHLYAIDTVTAALQPLTGGTGEEREPAVSPDGRRIAFTSGA 600

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           ++  D+  + L    T+ L  T     S ++SP   Q V+ +       +++        
Sbjct: 601 ED-TDLIEIALDGTKTKTLLATSRPEYSGAWSPSGLQYVYVTSAPDGPAIWMRSLAEGWA 659

Query: 339 KRI---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQA 394
           +     S +       P +SP G  IA+ + +G + A+ V    G     L  E ++   
Sbjct: 660 RPFEEGSAEGYLDLSQPRYSPDGQRIAYVR-TGARHAVYVSSTAGGPAVPLERESADQHT 718

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           P WSP G  + ++R    +           G+   L      +   +W  
Sbjct: 719 PAWSPDGNWIAYTRFVGQNWEITKAPSGGGGQPVRLGIGGDSSGWMEWSP 768



 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 95/261 (36%), Gaps = 24/261 (9%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYA---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           R   P   +      FS + + +      T D +  +  +++        K    +    
Sbjct: 475 RRPFPGSFRFFDGVSFSADGENLLVTVIETIDVKRGVEAWILPLPDGAPRKLAAPWPPAA 534

Query: 261 LAPR--FSSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                 ++ +G+R+++S++        +Y++D  + A + LT         + SPD  +I
Sbjct: 535 RPRTMVWAPDGRRSILSMEPAPGSWAHLYAIDTVTAALQPLTGGTGEEREPAVSPDGRRI 594

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            F S  E  + + +   +G+  K +       Y    WSP G    +   + +  AI + 
Sbjct: 595 AFTSGAEDTDLIEIA-LDGTKTKTLLATSRPEYSG-AWSPSGLQYVYVTSAPDGPAIWMR 652

Query: 377 KKDGSQERLLVEDS-----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
                  R   E S     +L  P +SP G+ + + R         +Y     G     +
Sbjct: 653 SLAEGWARPFEEGSAEGYLDLSQPRYSPDGQRIAYVRT---GARHAVYVSSTAGGPAVPL 709

Query: 432 -------NTPAYASDPQWVGF 445
                  +TPA++ D  W+ +
Sbjct: 710 ERESADQHTPAWSPDGNWIAY 730



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 57/296 (19%), Positives = 97/296 (32%), Gaps = 21/296 (7%)

Query: 147 SPASWRKIAHTISDDIY----QSITGEKGDFNSRILFVSESV---VSGIIKNSLCVMDRD 199
           +P SW   AH  + D      Q +TG  G+     +          SG     L  +  D
Sbjct: 555 APGSW---AHLYAIDTVTAALQPLTGGTGEEREPAVSPDGRRIAFTSGAEDTDLIEIALD 611

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   + L  +  +  +   +SP+  +  Y T   +               P   G+    
Sbjct: 612 GTKTKTLLAT-SRPEYSGAWSPSGLQYVYVTSAPDGPAIWMRSLAEGWARPFEEGSAEGY 670

Query: 260 I--LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +    PR+S +G+R    V+      +Y           L        + ++SPD + I 
Sbjct: 671 LDLSQPRYSPDGQRIAY-VRTGARHAVYVSSTAGGPAVPLERESADQHTPAWSPDGNWIA 729

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +        ++    S G  Q         S     WSP G  I     SG    + ++ 
Sbjct: 730 YTRFVGQNWEITKAPSGGGGQPVRLGIGGDSSGWMEWSPTGAWIGVRDASG----LQLVS 785

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            +G   R +       A  +S  G +L+  R +  D   +L S+ +    E    T
Sbjct: 786 PEGGAARHVH--GPCAAFAFSKDGNTLLVVR-RSKDQHWELASLGVADGVERKSVT 838



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 84/242 (34%), Gaps = 24/242 (9%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +P +SP+ Q +AY     +D  +V+    +      ++ + +   ++P +S +G R    
Sbjct: 353 QPAWSPDAQALAYVA-TVDDTPQVFTRSLK-SPLAVQLTHSQRASISPFWSPDGSRVYYW 410

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIVFESDREGKEQLYVMQS 333
            Q      ++SV     A + +   +        + SPD     F   R    Q  V   
Sbjct: 411 SQGS----LWSVGAAGGAPQLVIQDVATPRGPAAAISPDGKTFAF--FRHDGPQFAVFLQ 464

Query: 334 NGSD-----QKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEKFAIGVMKKDGSQER 384
           +G++     ++R        +    +S  G+ +  T              ++       R
Sbjct: 465 SGTEKAVAYKRRPFPGSFRFFDGVSFSADGENLLVTVIETIDVKRGVEAWILPLPDGAPR 524

Query: 385 LLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASD 439
            L       A      W+P GR  I S +    + + LY+ID +    + L        +
Sbjct: 525 KLAAPWPPAARPRTMVWAPDGRRSILSMEPAPGSWAHLYAIDTVTAALQPLTGGTGEERE 584

Query: 440 PQ 441
           P 
Sbjct: 585 PA 586



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 87/256 (33%), Gaps = 29/256 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                +    P +SP+  +V Y  +    +  V           + +   R    A   S
Sbjct: 388 LTHSQRASISPFWSPDGSRVYY--WSQGSLWSVGAAGGAPQLVIQDVATPRGP--AAAIS 443

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLT--------NTLFINISASYSPDSSQIVF 318
            +GK      + D     ++V LQS   + +         +  F +   S+S D   ++ 
Sbjct: 444 PDGKTFAF-FRHDG--PQFAVFLQSGTEKAVAYKRRPFPGSFRFFD-GVSFSADGENLLV 499

Query: 319 ES----DREGKEQLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDL--IAFTKFSGEK 370
                 D +   + +++       ++++     +      VW+P G    ++     G  
Sbjct: 500 TVIETIDVKRGVEAWILPLPDGAPRKLAAPWPPAARPRTMVWAPDGRRSILSMEPAPGSW 559

Query: 371 FAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNE 428
             +  +    +  + L   +  +  P  SP GR + F+    G   + L  I L+G + +
Sbjct: 560 AHLYAIDTVTAALQPLTGGTGEEREPAVSPDGRRIAFTS---GAEDTDLIEIALDGTKTK 616

Query: 429 TLINTPAYASDPQWVG 444
           TL+ T        W  
Sbjct: 617 TLLATSRPEYSGAWSP 632



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 48/148 (32%), Gaps = 15/148 (10%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           IS+ K      Y                      ++SPD+  + + +  +   Q++    
Sbjct: 328 ISISKGARPQPYIY-------TPFATDAVDESQPAWSPDAQALAYVATVDDTPQVFTRSL 380

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL---VEDS 390
                 +++  + AS   P WSP G  + +        ++  +   G   +L+   V   
Sbjct: 381 KSPLAVQLTHSQRAS-ISPFWSPDGSRVYYWSQG----SLWSVGAAGGAPQLVIQDVATP 435

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              A   SP G++  F R         L
Sbjct: 436 RGPAAAISPDGKTFAFFRHDGPQFAVFL 463


>gi|325299351|ref|YP_004259268.1| peptidase S41 [Bacteroides salanitronis DSM 18170]
 gi|324318904|gb|ADY36795.1| peptidase S41 [Bacteroides salanitronis DSM 18170]
          Length = 1080

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 79/230 (34%), Gaps = 34/230 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            R+    S    P +S +GK+   +  +
Sbjct: 30  ISPDGNEIAFCY--KGDIYKVK----ASGGEAVRLTTQPSYESTPVWSPDGKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGK--------EQ 327
              MD++ +  Q     RLT      I ++++PD  Q+VF +   D  G          +
Sbjct: 84  FGNMDVFIMPSQGGEARRLTFNSASEIPSAFTPDGKQVVFSASIQDPAGSALFPKSAMTE 143

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY + + G    +I            + P G    +               S     + +
Sbjct: 144 LYQVPAEGGRTAQII---GTPAEMVCYEPSGKFFLYQDQKGVESEWRKHHTSSITRDVWM 200

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +   L       + P  SP G  + F  ++DG +   +Y   L+
Sbjct: 201 YDVAAGKHTNLTNRAGEDRNPVLSPDGTQVYFLSERDGGS-FNVYRFPLD 249



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 113/303 (37%), Gaps = 39/303 (12%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            +Y     + G FN               ++   V    G  +R+L+ SR+  L    ++
Sbjct: 229 QVYFLSERDGGSFN------VYRFPLDRPQDVQAVTSFKGNPVRFLSVSRNGTLC---YT 279

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            +  ++   +       +V +  T  +        F         S +GK+    V+   
Sbjct: 280 YDG-ELYTQSLQAGQAKKVPVSLTSDEENIPVSYTFTRGASEATVSPDGKQVAFVVRG-- 336

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK- 339
             +++   ++   T+++T+T       S+  D+  +V+ S+R+G   LY  + +  ++K 
Sbjct: 337 --EVFVTSVEYGTTKQITHTPEAEEGVSFGADNRTLVYASERDGISGLYTAKISREEEKN 394

Query: 340 ----------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                      +   K      P +SP G  IAF +    +  + V+     + R + + 
Sbjct: 395 FPNATLIEEEALLPSKTVERSYPKFSPDGKEIAFIE---GRTRLMVLNLKSKKVRQVTDG 451

Query: 390 SNLQAPT------WSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNET--LINTPAYASD 439
           S   + +      WSP G+     F   K  +  S +  +  +G++    L N+   +  
Sbjct: 452 STWYSLSGGFDYQWSPDGKWFALEFIAHKH-EPYSDIGLVCADGKSPIINLTNSGYTSGM 510

Query: 440 PQW 442
           P+W
Sbjct: 511 PRW 513



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 85/250 (34%), Gaps = 42/250 (16%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           DG+    L+   D      ++SP+ +  A  +  +  E    + L+          + N 
Sbjct: 450 DGSTWYSLSGGFDY-----QWSPDGKWFALEFIAHKHEPYSDIGLVCADGKSPIINLTNS 504

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQ 315
                 PR++ +G   L + ++    +                       AS+ S D   
Sbjct: 505 GYTSGMPRWTMDGNALLFTTERYGMRN----------------------HASWGSLDDVM 542

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +VF  +++  ++  + + +   QK +  +KE        S             +   +  
Sbjct: 543 MVFL-NQDAYDKFRLSKEDYELQKEL--EKEQEKAGETASKDKKKDKKADAKTDSVKLIT 599

Query: 376 MKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           ++ DG      RL    S L +   S  G +L +    +G  G  ++ +DL      L+ 
Sbjct: 600 VEPDGIEDRIVRLTPNSSRLSSAAISKDGETLYYLSAFEG--GFDMWKMDLRKHETKLL- 656

Query: 433 TPAYASDPQW 442
              +  D +W
Sbjct: 657 ---HKMDARW 663



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 7/54 (12%)

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
           ++    SP G  + F  K        +Y +  +G     L   P+Y S P W  
Sbjct: 25  MRDAVISPDGNEIAFCYK------GDIYKVKASGGEAVRLTTQPSYESTPVWSP 72


>gi|17225208|gb|AAL37300.1|AF323584_1 beta transducin-like protein HET-E2C*40 [Podospora anserina]
          Length = 1356

 Score =  115 bits (289), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 90/266 (33%), Gaps = 19/266 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 980  QRVASGSGDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQRVASGSDDK----TIKI 1035

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             DT      + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 1036 WDTASGTCTQTLEGHGGWVWSVAFSPDGQRVA-SGSIDGTIKIW--DAASGTCTQTLEGH 1092

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   SD      + +  +      +  +    S +   +SP G  
Sbjct: 1093 GDWVQSVAFSPDGQRVASGSD---DHTIKIWDAASGTCTQTLEGHGDSVWSVAFSPDGQR 1149

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A     G    I +           +E     + +  +SP G+ +  S   DG    K+
Sbjct: 1150 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGT--IKI 1203

Query: 419  YSIDLNGRNETLINTPAYASDPQWVG 444
            +        +TL     +     +  
Sbjct: 1204 WDAASGTCTQTLEGHGGWVHSVAFSP 1229



 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 93/264 (35%), Gaps = 15/264 (5%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 854  QRVASGSDDKTIKIWDAASGTGTQTLEGHGGSVWSVAFSPDGQRVASGSDDK----TIKI 909

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +    S +L+  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 910  WDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA-SGSGDKTIKIW--DTASGTGTQTLEGH 966

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  
Sbjct: 967  GGSVWSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQR 1023

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +A +    +   I         + L      + +  +SP G+ +  S   DG    K++ 
Sbjct: 1024 VA-SGSDDKTIKIWDTASGTCTQTLEGHGGWVWSVAFSPDGQRVA-SGSIDGT--IKIWD 1079

Query: 421  IDLNGRNETLINTPAYASDPQWVG 444
                   +TL     +     +  
Sbjct: 1080 AASGTCTQTLEGHGDWVQSVAFSP 1103



 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 89/265 (33%), Gaps = 23/265 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 896  QRVASGSDDKTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDK----TIKI 951

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             DT      + +      + +  FS +G+R   S   D+ + I+  D  S    +     
Sbjct: 952  WDTASGTGTQTLEGHGGSVWSVAFSPDGQRVA-SGSGDKTIKIW--DTASGTCTQTLEGH 1008

Query: 302  FINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              ++ S ++SPD  ++   SD    + + +  +      +  +      +   +SP G  
Sbjct: 1009 GNSVWSVAFSPDGQRVASGSD---DKTIKIWDTASGTCTQTLEGHGGWVWSVAFSPDGQR 1065

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKL 418
            +A     G    I +           +E       +  +SP G+ +        D   K+
Sbjct: 1066 VASGSIDGT---IKIWDAASGTCTQTLEGHGDWVQSVAFSPDGQRVASGSD---DHTIKI 1119

Query: 419  YSIDLNGRNETLINTPAYASDPQWV 443
            +    +  + T   T     D  W 
Sbjct: 1120 W----DAASGTCTQTLEGHGDSVWS 1140



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 82/252 (32%), Gaps = 19/252 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 1022 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVWSVAFSPDGQRVASGSIDG----TIKI 1077

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 1078 WDAASGTCTQTLEGHGDWVQSVAFSPDGQRVA-SGSDDHTIKIW--DAASGTCTQTLEGH 1134

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   S       + +  +      +  +          +SP G  
Sbjct: 1135 GDSVWSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQR 1191

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A     G    I +           +E     + +  +SP G+ +        D   K+
Sbjct: 1192 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA---SGSSDNTIKI 1245

Query: 419  YSIDLNGRNETL 430
            +        +TL
Sbjct: 1246 WDTASGTCTQTL 1257



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 92/256 (35%), Gaps = 23/256 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQQKV--AYATYDDED 235
               I+  L  + RDG   R+    R  I   P         F+P    +   +   +   
Sbjct: 762  GHTIRGRLIAIVRDGY--RFALSYRMIIEKAPLQAYTSALVFAPTDSMIKKIFKKEEPGW 819

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            I  + +++   +   + +    S +L+  FS +G+R   S   D+ + I+  D  S    
Sbjct: 820  ISTISVVEAEWNACTQTLEGHGSSVLSVAFSPDGQRVA-SGSDDKTIKIW--DAASGTGT 876

Query: 296  R-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            + L        S ++SPD  ++   SD    + + +  +      +  +   +S     +
Sbjct: 877  QTLEGHGGSVWSVAFSPDGQRVASGSD---DKTIKIWDAASGTCTQTLEGHGSSVLSVAF 933

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            SP G  +A +    +   I         + L     ++ +  +SP G+ +       GD 
Sbjct: 934  SPDGQRVA-SGSGDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVA---SGSGDK 989

Query: 415  GSKLYSIDLNGRNETL 430
              K++        +TL
Sbjct: 990  TIKIWDTASGTCTQTL 1005



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 96/303 (31%), Gaps = 51/303 (16%)

Query: 117  IKEGKDRLRVEFRLWDVKDR---KQIIG-----KKFFSSPASWRKIA----HTI-----S 159
             +     +    ++WD       + + G     +    SP   R  +    HTI     +
Sbjct: 1064 QRVASGSIDGTIKIWDAASGTCTQTLEGHGDWVQSVAFSPDGQRVASGSDDHTIKIWDAA 1123

Query: 160  DDIYQSITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                       GD    + F    + V SG I  ++ + D                +   
Sbjct: 1124 SGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSV 1183

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ Q+VA  + D      + + D       + +      + +  FS +G+R   S  
Sbjct: 1184 AFSPDGQRVASGSIDG----TIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGS 1238

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--- 334
             D  + I+  D  S    +  N        S+   +    + +   G+ Q+         
Sbjct: 1239 SDNTIKIW--DTASGTCTQTLNVGSTATCLSFDYTN---AYINTNIGRIQIATATMESLN 1293

Query: 335  ------------GSDQKRISQDKEASYFDP------VWSPQGDLIAFTKFSGEKFAIGVM 376
                        G D + I+ + +   + P       ++ QG  I F  +SG +  I + 
Sbjct: 1294 QLSSPVCYSYGLGQDYRWITCNNQNVLWLPPEYHTSAFTMQGRKIVFGCYSG-RIIIFLF 1352

Query: 377  KKD 379
             +D
Sbjct: 1353 SRD 1355


>gi|311745279|ref|ZP_07719064.1| peptidase, S9A/B/C family [Algoriphagus sp. PR1]
 gi|126577811|gb|EAZ82031.1| peptidase, S9A/B/C family [Algoriphagus sp. PR1]
          Length = 676

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 52/330 (15%), Positives = 114/330 (34%), Gaps = 62/330 (18%)

Query: 164 QSITGEKGDFN-SRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           + +T      + S++++V     +++    ++L + + DG   R LT         P +S
Sbjct: 35  EYVTNPSISPDGSKVVYVRNFKDIMTDRDYSNLWISNIDGTQNRPLTQGNHN-DVSPVWS 93

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----- 275
            +  K+AY +   ++ ++++++     +    + N  +   +  +S + +    +     
Sbjct: 94  HDGTKIAYRSNQQDEKMKLFVLYLDT-KESVALTNSANPPGSVSWSFDDQELAFTQFVPK 152

Query: 276 -----------------------------------VQKDEAMDIYSVDLQSNATERLTNT 300
                                                K     I+++ L      + T  
Sbjct: 153 QKKSLLNIPAKPEGATWNDAPIYIDEMNYRGDGAGYYKSGNQQIFTIGLAGGTARQWTFD 212

Query: 301 LFINISASYSPDSSQIVFESD-------REGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                   ++ D   ++F ++         G   +Y +       K ++  +      PV
Sbjct: 213 DNDYGIPIWTKDGKSLIFSANLHENHDLEPGNSDIYQLDLASGSIKALTS-RFGPDGGPV 271

Query: 354 WSPQGDLIAFTKFSGEKF-----AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIF 406
            SP G  IA+T F           + VM  DGS  + L    D +   P W  +G+ + F
Sbjct: 272 LSPDGTQIAYTGFDDSYQGYQVTNLYVMNLDGSGIKNLTADLDRDAANPQWESNGKGIYF 331

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
              + GDT  K+  + L G+  T++     
Sbjct: 332 QYDEFGDT--KIGHVALTGKIRTVVEGLGG 359



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 101/301 (33%), Gaps = 61/301 (20%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGN 255
            N+        + +  P  SP+  KV Y         D D   +++ +    +  + +  
Sbjct: 24  TNLELTDIFNLEYVTNPSISPDGSKVVYVRNFKDIMTDRDYSNLWISNIDGTQN-RPLTQ 82

Query: 256 FRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                ++P +S +G +    S Q+DE M ++ + L +  +  LTN+     S S+S D  
Sbjct: 83  GNHNDVSPVWSHDGTKIAYRSNQQDEKMKLFVLYLDTKESVALTNSANPPGSVSWSFDDQ 142

Query: 315 QIVFE----------------------------------------SDREGKEQLYVMQSN 334
           ++ F                                           + G +Q++ +   
Sbjct: 143 ELAFTQFVPKQKKSLLNIPAKPEGATWNDAPIYIDEMNYRGDGAGYYKSGNQQIFTIGLA 202

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-------SGEKFAIGVMKKDGSQERLLV 387
           G   ++ + D +  Y  P+W+  G  + F+               I  +       + L 
Sbjct: 203 GGTARQWTFD-DNDYGIPIWTKDGKSLIFSANLHENHDLEPGNSDIYQLDLASGSIKALT 261

Query: 388 EDSN-LQAPTWSPSGRSLIFSR---KKDGDTGSKLYSIDLNGRNETLIN--TPAYASDPQ 441
                   P  SP G  + ++       G   + LY ++L+G     +       A++PQ
Sbjct: 262 SRFGPDGGPVLSPDGTQIAYTGFDDSYQGYQVTNLYVMNLDGSGIKNLTADLDRDAANPQ 321

Query: 442 W 442
           W
Sbjct: 322 W 322



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/253 (13%), Positives = 82/253 (32%), Gaps = 34/253 (13%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIG 254
           G   ++     D  +  P ++ + + + ++      +D E              + K + 
Sbjct: 204 GTARQWTFDDNDYGI--PIWTKDGKSLIFSANLHENHDLEPGNSDIYQLDLASGSIKALT 261

Query: 255 NFRSMILAPRFSSNGKRALI-----SVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISAS 308
           +       P  S +G +        S Q  +  ++Y ++L  +  + LT  L  +  +  
Sbjct: 262 SRFGPDGGPVLSPDGTQIAYTGFDDSYQGYQVTNLYVMNLDGSGIKNLTADLDRDAANPQ 321

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNG------SDQKRISQDKEASYFDPVWSPQGDLIA 362
           +  +   I F+ D  G  ++  +   G           +   +  +  D   S   +  A
Sbjct: 322 WESNGKGIYFQYDEFGDTKIGHVALTGKIRTVVEGLGGLDLGRPYNAGDFSVS-NTNKFA 380

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +T   G      +      + + +   ++             IFS +  G+     +   
Sbjct: 381 YT-LGGADHPADLAVLSDGEVKRITALNDD------------IFSFRNLGEVEEIWWKSS 427

Query: 423 LNG-RNETLINTP 434
            +G + +  I TP
Sbjct: 428 YDGLKIQGWIVTP 440



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 9/118 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    +L VM+ DG+ I+ LT   D+    P++  N + + +   +  D    ++     
Sbjct: 290 GYQVTNLYVMNLDGSGIKNLTADLDRDAANPQWESNGKGIYFQYDEFGDTKIGHV--ALT 347

Query: 247 DRAPKRIGNFRSMIL-----APRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            +    +     + L     A  FS SN  +   ++   +     +V L     +R+T
Sbjct: 348 GKIRTVVEGLGGLDLGRPYNAGDFSVSNTNKFAYTLGGADHPADLAV-LSDGEVKRIT 404


>gi|237722924|ref|ZP_04553405.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229447446|gb|EEO53237.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 1119

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 83/236 (35%), Gaps = 34/236 (14%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            + + R SP+  ++ +      DI +V            ++    S    P +S +GK+ 
Sbjct: 24  WMRDARISPDGSEIVFCY--KGDIYKVPAQ----GGTAVQLTTQTSYEANPVWSPDGKQI 77

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGK---- 325
             +  ++   D++ +     A  RLT      I ++++PD   I F +   D  G     
Sbjct: 78  AFASDRNGNFDLFIMPADGGAARRLTYHSASEIPSAFTPDGKYIFFSASIQDPVGSALFP 137

Query: 326 ----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGE 369
                +LY +   G   +++     A       +  G    +               S  
Sbjct: 138 TGAMTELYKVPVAGGRTEQVL-GTPAELVCFDKT--GKNFLYQDRKGFEDEWRKHHTSSI 194

Query: 370 KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              I +      +   L   +   + P ++P G ++ F  ++DG +   +Y+  LN
Sbjct: 195 TRDIWLYNTQTGKHTNLTNREGEDRNPVYAPDGNAVYFLSERDGGS-FNVYTFPLN 249



 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 79/221 (35%), Gaps = 34/221 (15%)

Query: 252 RIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +    S  + P +      S +G   +   + D    IY V  Q     +LT       
Sbjct: 11  VLSALSSYAITPLWMRDARISPDGSEIVFCYKGD----IYKVPAQGGTAVQLTTQTSYEA 66

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  +SPD  QI F SDR G   L++M ++G   +R++    AS     ++P G  I F+ 
Sbjct: 67  NPVWSPDGKQIAFASDRNGNFDLFIMPADGGAARRLTY-HSASEIPSAFTPDGKYIFFSA 125

Query: 366 F-----------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--- 411
                       +G    +  +   G +   ++     +   +  +G++ ++  +K    
Sbjct: 126 SIQDPVGSALFPTGAMTELYKVPVAGGRTEQVLGTP-AELVCFDKTGKNFLYQDRKGFED 184

Query: 412 -------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                        ++  +   G++  L N      +P +  
Sbjct: 185 EWRKHHTSSITRDIWLYNTQTGKHTNLTNREGEDRNPVYAP 225



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 99/310 (31%), Gaps = 81/310 (26%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM------- 259
             +R+     P ++P+   V + +  D     VY       +  K +  F++        
Sbjct: 211 LTNREGEDRNPVYAPDGNAVYFLSERDGGSFNVYTFPLNTPQEVKAVTTFKTHPVRFLSV 270

Query: 260 ----------------------------------------------ILAPRFSSNGKRAL 273
                                                           +   S +GK+  
Sbjct: 271 SDKGTLCYTYDGELYTQKSGARPEKVKVELVRDDEQQLATLKFSQGATSASVSPDGKQIA 330

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM-- 331
             V+ D    ++        T+++TNT     + S++PD+  +V+ S+R G  QLY    
Sbjct: 331 FIVRGD----VFVTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASERTGNWQLYTAKI 386

Query: 332 ---------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                     +   +++ +   K      P +SP G  +AF +       + V+     +
Sbjct: 387 SRKEDPNFPNATLIEEEVLLPSKTVERTYPQYSPDGKELAFIEDRN---RLMVLNLKTKK 443

Query: 383 ERLLVEDSNLQ------APTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            R + + S            WSP G+   L F   +  D  S +  +   G   T +   
Sbjct: 444 VRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRH-DPYSDVGIVSAQGGAITNLTNS 502

Query: 435 AYAS-DPQWV 443
            Y S  P+WV
Sbjct: 503 GYISGAPRWV 512



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 76/215 (35%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A+    D        + +      K+I N  +   A  F+ + +  + + +
Sbjct: 321 SVSPDGKQIAFIVRGD------VFVTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN------------ISASYSPDSSQIVFESDREGK 325
           +     +Y+  +         N   I                 YSPD  ++ F  DR   
Sbjct: 375 RTGNWQLYTAKISRKEDPNFPNATLIEEEVLLPSKTVERTYPQYSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  +G++  
Sbjct: 432 NRLMVLNLKTKKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDVGIVSA 491

Query: 379 DGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G     L     +  AP W   G +++F  ++ G
Sbjct: 492 QGGAITNLTNSGYISGAPRWVLDGNAILFQTERYG 526



 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 81/234 (34%), Gaps = 32/234 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +       
Sbjct: 41  YKGDIYKVPAQGGTAVQLTTQTS-YEANPVWSPDGKQIAFASDRNGNFDLFIM--PADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERL 297
           A +R+    +  +   F+ +GK    S                  ++Y V +    TE++
Sbjct: 98  AARRLTYHSASEIPSAFTPDGKYIFFSASIQDPVGSALFPTGAMTELYKVPVAGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  +       ++ +
Sbjct: 158 LGTPAELV--CFDKTGKNFLYQ-DRKGFEDEWRKHHTSSITRDIWLYNTQTGKHTNLT-N 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +E    +PV++P G+ + F ++  G  F +     +  QE   V         +
Sbjct: 214 REGEDRNPVYAPDGNAVYFLSERDGGSFNVYTFPLNTPQEVKAVTTFKTHPVRF 267



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 85/220 (38%), Gaps = 22/220 (10%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK     V   ++ V        K+  ++PA    ++    +      +   G+
Sbjct: 320 ASVSPDGKQIAFIVRGDVF-VTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASERTGN 378

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +      +S          +L            L PS+      P++SP+ +++A+    
Sbjct: 379 WQLYTAKISRKEDPNFPNATLI-------EEEVLLPSKTVERTYPQYSPDGKELAFI--- 428

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRA---LISVQKDEAMDI 284
            ED  R+ +++ +  +  +++ +              +S +GK      I  + D   D+
Sbjct: 429 -EDRNRLMVLNLKT-KKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDV 486

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
             V  Q  A   LTN+ +I+ +  +  D + I+F+++R G
Sbjct: 487 GIVSAQGGAITNLTNSGYISGAPRWVLDGNAILFQTERYG 526


>gi|103487490|ref|YP_617051.1| peptidase S9, prolyl oligopeptidase active site region
           [Sphingopyxis alaskensis RB2256]
 gi|98977567|gb|ABF53718.1| peptidase S9, prolyl oligopeptidase active site region
           [Sphingopyxis alaskensis RB2256]
          Length = 720

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 87/279 (31%), Gaps = 58/279 (20%)

Query: 213 ILFEPRFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           I  +P+ SP+ + +AY         D  +  ++L+DT   R    +        +PR+S 
Sbjct: 70  IAADPQISPDGRHIAYVRRANDIMTDRAVSSIWLIDTATGRET-PLAGQDGPAFSPRWSP 128

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------- 319
           +G R         +  ++   +      RLT       S +++PD   I +         
Sbjct: 129 DGSRLAYVSAAGGSAQLWVRWMDGGEAVRLTGLPTSPSSLTWAPDGRSIAYTMLVKDEGA 188

Query: 320 ---------------------------------SDREGKEQLYVMQSNGSDQKRISQDKE 346
                                                G E+++++ + G   ++++    
Sbjct: 189 RLGSAPANKPEGAKWAEPLDVRTLLTYRADGQGYVEPGFEKIFLIPATGGAPRQLTFGPY 248

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKF-------AIGVMKKDGSQERLLVE-DSNLQAPTWS 398
                  WS  G  + F+     ++        I  +         L + +     P  S
Sbjct: 249 HDGGPLSWSRDGRTLYFSANRQAEWETDPLESEIHALDVASGAIATLTDRNGPDANPLVS 308

Query: 399 PSGRSLIFSRKKDGDTG---SKLYSIDLNGRNETLINTP 434
           P GR + +    D       ++LY ++ +G     I   
Sbjct: 309 PDGRLIAYLGFDDALRAYEQTELYVMNRDGSGRRRIAAN 347



 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 103/307 (33%), Gaps = 62/307 (20%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            I +V  +      +    +   D A  R      +D   F PR+SP+  ++AY +    
Sbjct: 82  HIAYVRRANDIMTDRAVSSIWLIDTATGRETPLAGQDGPAFSPRWSPDGSRLAYVSAAGG 141

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV------------------ 276
                  +         R+    +   +  ++ +G+    ++                  
Sbjct: 142 SAQ--LWVRWMDGGEAVRLTGLPTSPSSLTWAPDGRSIAYTMLVKDEGARLGSAPANKPE 199

Query: 277 -----------------------QKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPD 312
                                   +     I+ +     A  +LT   + +    S+S D
Sbjct: 200 GAKWAEPLDVRTLLTYRADGQGYVEPGFEKIFLIPATGGAPRQLTFGPYHDGGPLSWSRD 259

Query: 313 SSQIVFESDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              + F ++R+        + +++ +         ++ D+     +P+ SP G LIA+  
Sbjct: 260 GRTLYFSANRQAEWETDPLESEIHALDVASGAIATLT-DRNGPDANPLVSPDGRLIAYLG 318

Query: 366 FSG-----EKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           F       E+  + VM +DGS  R +    D ++ A  W    RSL       G+T  K+
Sbjct: 319 FDDALRAYEQTELYVMNRDGSGRRRIAANWDYSVDAVQWGADSRSLYVQYDDHGET--KV 376

Query: 419 YSIDLNG 425
             + L+G
Sbjct: 377 ARVTLDG 383



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 82/259 (31%), Gaps = 57/259 (22%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           SR+ +VS +  S      L V   DG     LT           ++P+ + +AY      
Sbjct: 131 SRLAYVSAAGGSA----QLWVRWMDGGEAVRLTGLPTSPSSL-TWAPDGRSIAYTMLVKD 185

Query: 232 ------------------------------------DDEDILRVYLMDTRIDRAPKRIGN 255
                                                 E       +      AP+++  
Sbjct: 186 EGARLGSAPANKPEGAKWAEPLDVRTLLTYRADGQGYVEPGFEKIFLIPATGGAPRQLTF 245

Query: 256 FRSMILAP-RFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISA 307
                  P  +S +G+    S  +    +       I+++D+ S A   LT+    + + 
Sbjct: 246 GPYHDGGPLSWSRDGRTLYFSANRQAEWETDPLESEIHALDVASGAIATLTDRNGPDANP 305

Query: 308 SYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             SPD   I +    +      + +LYVM  +GS ++RI+ + + S     W      + 
Sbjct: 306 LVSPDGRLIAYLGFDDALRAYEQTELYVMNRDGSGRRRIAANWDYSVDAVQWGADSRSLY 365

Query: 363 FTKFSGEKFAIGVMKKDGS 381
                  +  +  +  DGS
Sbjct: 366 VQYDDHGETKVARVTLDGS 384



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 18/134 (13%)

Query: 288 DLQSNATERLT----NTLFINISASYSPDSSQIVFES-------DREGKEQLYVMQSNGS 336
             ++    R T      L I      SPD   I +         DR     ++++ +   
Sbjct: 51  SARTGPERRFTGADLFDLAIAADPQISPDGRHIAYVRRANDIMTDRA-VSSIWLIDTATG 109

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +  ++  ++   F P WSP G  +A+   +G    + V   DG +   L       +P+
Sbjct: 110 RETPLA-GQDGPAFSPRWSPDGSRLAYVSAAGGSAQLWVRWMDGGEAVRLT--GLPTSPS 166

Query: 397 ---WSPSGRSLIFS 407
              W+P GRS+ ++
Sbjct: 167 SLTWAPDGRSIAYT 180



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 25/81 (30%), Gaps = 10/81 (12%)

Query: 374 GVMKKDGSQERLLVEDSNLQ-----APTWSPSGRSLIFSRKKDG----DTGSKLYSID-L 423
            V       ER               P  SP GR + + R+ +        S ++ ID  
Sbjct: 48  AVGSARTGPERRFTGADLFDLAIAADPQISPDGRHIAYVRRANDIMTDRAVSSIWLIDTA 107

Query: 424 NGRNETLINTPAYASDPQWVG 444
            GR   L      A  P+W  
Sbjct: 108 TGRETPLAGQDGPAFSPRWSP 128


>gi|297181482|gb|ADI17669.1| dipeptidyl aminopeptidases/acylaminoacyl-peptidases [uncultured
           gamma proteobacterium HF0130_23I23]
          Length = 677

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/288 (18%), Positives = 104/288 (36%), Gaps = 57/288 (19%)

Query: 212 QILFEPRFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSS 267
           +   +P+ SP+ + + Y        +D +R  +   +ID    R + +      +PR+S 
Sbjct: 37  EWASDPQVSPDSKTIVYVRKSHDIMKDEVRSNIWQIKIDGEDHRPLYSELGDSYSPRWSP 96

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------- 319
           N  R        E+  I+    +S  T  +T       S S+SPD   I F         
Sbjct: 97  NQDRLAFLSNNSESTQIHMYWFKSGETRAITQLPESPSSLSWSPDGKWIAFTMNVKTKSN 156

Query: 320 -------------------------SDREGKE-------QLYVMQSNGSDQKRISQDKEA 347
                                       +G+         ++V+ + G   ++++     
Sbjct: 157 AIVESREKPDGANWAKKPITVTTTRYQYDGRGIVEPSYRHIFVVPAEGGSARQLTTGNFN 216

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIG--------VMKKDGSQERLLVEDSNLQAPTWSP 399
            Y    WSP  + I F+    + + +         V   D S +++  +     +P  SP
Sbjct: 217 HYGSLSWSPDSESIFFSAHRSDDWELASSEADIHSVKITDESIDQITDQSGEESSPIVSP 276

Query: 400 SGRSLIFS---RKKDGDTGSKLYSIDLNGRNETLINT--PAYASDPQW 442
           +G+ + F+   R+    T +++  +DL G+N  +I+      A +  W
Sbjct: 277 NGKLVAFNLRERRPLAYTPNRIAVMDLEGKNIRVISGDLDGDAENIVW 324



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 60/310 (19%), Positives = 114/310 (36%), Gaps = 63/310 (20%)

Query: 174 NSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           +  I++V  S  ++   +++++  +  DG + R L  S     + PR+SPNQ ++A+ + 
Sbjct: 48  SKTIVYVRKSHDIMKDEVRSNIWQIKIDGEDHRPLY-SELGDSYSPRWSPNQDRLAFLSN 106

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------------- 277
           + E       M        + I        +  +S +GK    ++               
Sbjct: 107 NSESTQ--IHMYWFKSGETRAITQLPESPSSLSWSPDGKWIAFTMNVKTKSNAIVESREK 164

Query: 278 KDEAMD--------------------------IYSVDLQSNATERLTNTLFINI-SASYS 310
            D A                            I+ V  +  +  +LT   F +  S S+S
Sbjct: 165 PDGANWAKKPITVTTTRYQYDGRGIVEPSYRHIFVVPAEGGSARQLTTGNFNHYGSLSWS 224

Query: 311 PDSSQIVFESDREGKEQ-------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           PDS  I F + R    +       ++ ++       +I+ D+      P+ SP G L+AF
Sbjct: 225 PDSESIFFSAHRSDDWELASSEADIHSVKITDESIDQIT-DQSGEESSPIVSPNGKLVAF 283

Query: 364 TKFSGEKF-----AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
                         I VM  +G   R++    D + +   W+   +S+ F+  + G    
Sbjct: 284 NLRERRPLAYTPNRIAVMDLEGKNIRVISGDLDGDAENIVWAEDNQSIYFTYDERG--VR 341

Query: 417 KLYSIDLNGR 426
           K+  I L G+
Sbjct: 342 KIGEITLTGK 351



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 89/258 (34%), Gaps = 35/258 (13%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DGAN       +   +   R+  + + +   +Y       ++++      A +      
Sbjct: 165 PDGANW----AKKPITVTTTRYQYDGRGIVEPSYRH-----IFVVPAEGGSARQLTTGNF 215

Query: 258 SMILAPRFSSNGKRALISVQKDEAM-------DIYSVDLQSNATERLTNTLFINISASYS 310
           +   +  +S + +    S  + +         DI+SV +   + +++T+      S   S
Sbjct: 216 NHYGSLSWSPDSESIFFSAHRSDDWELASSEADIHSVKITDESIDQITDQSGEESSPIVS 275

Query: 311 PDSSQIVFESDREGKE------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           P+   + F   RE +       ++ VM   G + + IS D +    + VW+     I FT
Sbjct: 276 PNGKLVAFN-LRERRPLAYTPNRIAVMDLEGKNIRVISGDLDGDAENIVWAEDNQSIYFT 334

Query: 365 KFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRS------LIFSRKKDGDTGS 416
                   IG +   G           + +  P  S  G        + F+  +  D  +
Sbjct: 335 YDERGVRKIGEITLTGKLSEAATSIGGTTIGRPYIS--GGFHVAKNTIAFTYGQS-DRPA 391

Query: 417 KLYSIDLNGRNETLINTP 434
            L  +  NG+ + L    
Sbjct: 392 DLAIM-QNGKFKLLTGLN 408



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 14/109 (12%)

Query: 350 FDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGR 402
            DP  SP    I + + S +      +  I  +K DG   R L  E  +  +P WSP+  
Sbjct: 40  SDPQVSPDSKTIVYVRKSHDIMKDEVRSNIWQIKIDGEDHRPLYSELGDSYSPRWSPNQD 99

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP------AYASDPQWVGF 445
            L F       T   +Y    +G    +   P      +++ D +W+ F
Sbjct: 100 RLAFLSNNSESTQIHMYWFK-SGETRAITQLPESPSSLSWSPDGKWIAF 147


>gi|311029453|ref|ZP_07707543.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Bacillus sp. m3-13]
          Length = 663

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 84/241 (34%), Gaps = 49/241 (20%)

Query: 214 LFEPRFSPNQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           + +P++  + +K A+     +++E+  R  +    ++       + +    +PR+S +G 
Sbjct: 17  ITDPQWDKHSRKYAFVQTTVHEEENEYRSTIYVGDLEGNAVPFTSGKGRATSPRWSPDGS 76

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----------- 319
           +      ++E   +Y + +     E++T          +SP  ++++F            
Sbjct: 77  KLAFVSNRNEKSQLYVMPVNGGEAEQVTFCKNGARGPVWSPCGTKLLFSTSVESAEDLHS 136

Query: 320 ----------------------SDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDP 352
                                 SD +G      + L ++     +   ++ + +  Y   
Sbjct: 137 TSSTSEEKKKPEPLVVEKMRYKSDAKGFLDNKNDHLALLDLKTKEVSLLT-EGDRDYGSA 195

Query: 353 VWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLI 405
            WSP G  IAF     E         + VM     ++  +          ++SP G+ L 
Sbjct: 196 AWSPDGTKIAFVANLEENPDVSLVSDVYVMDVQSKEKNKITHSNGFFSTISFSPDGQYLG 255

Query: 406 F 406
           F
Sbjct: 256 F 256



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 100/280 (35%), Gaps = 53/280 (18%)

Query: 165 SITGEKGDFNSRI-LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           SIT  + D +SR   FV  +V     +    +   D         S       PR+SP+ 
Sbjct: 16  SITDPQWDKHSRKYAFVQTTVHEEENEYRSTIYVGDLEGNAVPFTSGKGRATSPRWSPDG 75

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            K+A+ +  +E   ++Y+M        +++   ++    P +S  G + L S   + A D
Sbjct: 76  SKLAFVSNRNEKS-QLYVMPVN-GGEAEQVTFCKNGARGPVWSPCGTKLLFSTSVESAED 133

Query: 284 IYS--------------------------------------VDLQSNATERLTNTLFINI 305
           ++S                                      +DL++     LT       
Sbjct: 134 LHSTSSTSEEKKKPEPLVVEKMRYKSDAKGFLDNKNDHLALLDLKTKEVSLLTEGDRDYG 193

Query: 306 SASYSPDSSQIVFESDREGKE------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           SA++SPD ++I F ++ E          +YVM     ++ +I+      +    +SP G 
Sbjct: 194 SAAWSPDGTKIAFVANLEENPDVSLVSDVYVMDVQSKEKNKITH-SNGFFSTISFSPDGQ 252

Query: 360 LIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            + F        S     + V +    +   L E+ +++ 
Sbjct: 253 YLGFLGHEKEFQSATLTRVWVTQLATGETHCLTENLDVEV 292


>gi|302806842|ref|XP_002985152.1| hypothetical protein SELMODRAFT_121622 [Selaginella moellendorffii]
 gi|300146980|gb|EFJ13646.1| hypothetical protein SELMODRAFT_121622 [Selaginella moellendorffii]
          Length = 669

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 70/415 (16%), Positives = 122/415 (29%), Gaps = 78/415 (18%)

Query: 82  ISQDSFKQKI--TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
           +      Q +    P  +  F    S  +  +V          R      L+D+      
Sbjct: 245 LDAAKIDQAVERVTPPGVHAFTPAASRTSNWIVVATHRSNTTSR---HIELFDLSKG--- 298

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR---ILFVSESVVSGIIKNSLCVM 196
               F           H  +  +  +     G    R    +  +   V+    N + ++
Sbjct: 299 ---SFLPVTLELHPELHHFNPFVSATSDTLIGYHRCRNDGSIVPTLEHVACPANNDITLV 355

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
             DGA               P  S +   +AY T  +     V +         + +   
Sbjct: 356 RIDGA--------------FPSISSDGALIAYNTDFEASDSGVMVAKLDGSNRKRILT-- 399

Query: 257 RSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLF---------- 302
             +     ++      + +       +E   ++ V L +     L +             
Sbjct: 400 -GLAFTTCWNPCKPGTIYTSVGHIFAEERAMVHIVSL-TFDVTALEDHSSSSSSTLESSV 457

Query: 303 ---------INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-- 351
                     N   S SPD   +VF S R G + LY+M +   +   I    E  + D  
Sbjct: 458 KVLSKPGTNNNAFPSCSPDGKNLVFRSGRSGHKNLYIMDAELGEDGGIRALTEGPWVDTM 517

Query: 352 PVWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRS 403
           P WSP G+ IAF+          FAI ++  DGS+   +              +SP  ++
Sbjct: 518 PCWSPDGNWIAFSSSRDGPSNEFFAIYLVHPDGSELHRVFPESSTRGRCNHVCFSPDSQT 577

Query: 404 LIFSRKKDG------------DTGSKLYSIDLNGRNETLINTPAY-ASDPQWVGF 445
           L+F+    G                +L+S  L+G         AY    P W   
Sbjct: 578 LLFTADCGGISAEPVSLANQFQPYGELFSCKLDGSELRRWTHNAYEDGTPCWGPL 632



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 69/211 (32%), Gaps = 38/211 (18%)

Query: 269 GKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFESDRE 323
           G   + +   +   A D +++D+ +   E LT+ + +N +A +    P  S ++F S+R 
Sbjct: 6   GGTVVFASVGRSHYAFDAFALDIATLKEEVLTDGVSVNFNAQFVEDDPKPSAVIFVSERT 65

Query: 324 GKEQLYVMQS---------NGSDQKRISQDKEASYFDPVWSP---QGDLIAFTK------ 365
           G   +++ +          + S   ++        F     P    G  I F        
Sbjct: 66  GASNIFLRRQSLTSKSDRDDHSSTLKLGSLDAGDGFLYCDRPCVAGGGRIIFASTKSSPE 125

Query: 366 -----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                            + G   RL  E     +P  SPS + +  +         +++ 
Sbjct: 126 ISQNLRQPSTAIFSACLRIGLTRRLTPEGVADYSPALSPSKKWIAVASNAGKPWSGEIHE 185

Query: 421 IDL--------NGRNETLINTPAYASDPQWV 443
           ++         +G +  ++        P W 
Sbjct: 186 LETSLWIFKAEDGSSRKMVVERG--GWPTWS 214



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 92/248 (37%), Gaps = 31/248 (12%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDIL-RVYLMDTRIDRAPKRIGNFRSMILA----PRFSSN 268
            + P  SP+++ +A A+   +     ++ ++T +       G+ R M++     P +S +
Sbjct: 157 DYSPALSPSKKWIAVASNAGKPWSGEIHELETSLWIFKAEDGSSRKMVVERGGWPTWS-D 215

Query: 269 GKRALISVQ--KDEAMDIYSV-------DLQ----SNATERLTNTLFINISASYSPDSSQ 315
            +      +  +D+   IY         DL       A ER+T       + + S  S+ 
Sbjct: 216 ERTIFFHKRSPEDDWWSIYKAVLPESLEDLDAAKIDQAVERVTPPGVHAFTPAASRTSNW 275

Query: 316 IVFESDREGK--EQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGD-LIAFTKFSGEK 370
           IV  + R       + +   +      ++ +   E  +F+P  S   D LI + +   + 
Sbjct: 276 IVVATHRSNTTSRHIELFDLSKGSFLPVTLELHPELHHFNPFVSATSDTLIGYHRCRNDG 335

Query: 371 FAI----GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             +     V     +   L+  D     P+ S  G  + ++   +  + S +    L+G 
Sbjct: 336 SIVPTLEHVACPANNDITLVRIDGAF--PSISSDGALIAYNTDFEA-SDSGVMVAKLDGS 392

Query: 427 NETLINTP 434
           N   I T 
Sbjct: 393 NRKRILTG 400


>gi|51892044|ref|YP_074735.1| acylaminoacyl-peptidase [Symbiobacterium thermophilum IAM 14863]
 gi|51855733|dbj|BAD39891.1| acylaminoacyl-peptidase [Symbiobacterium thermophilum IAM 14863]
          Length = 717

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 94/303 (31%), Gaps = 90/303 (29%)

Query: 219 FSPNQQKVAYATYDDEDILRVY---LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            SP+  +VAY   + +     Y   +   R    P R          PR+S +G+  +  
Sbjct: 23  ISPDGTRVAYVLQEIDKKKNEYTSSIWLAREGSPPVRFTAGPR-DTQPRWSPDGRHLVFV 81

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------------- 321
             +  +  ++ + ++     ++T       +  +SPD   I F ++              
Sbjct: 82  SNRSGSNQLWLLSMEGGEARQITRIKGGVQNPVWSPDGRTIAFTANLTEAGIQPEGGDED 141

Query: 322 ---------------------REG-------KEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                                 +G       ++ + V+  +G + ++++   + ++ D  
Sbjct: 142 DQDLYRKYTKDVRVITRLHYKMDGVGFYTDERKHICVVDVDGGEPRQLTF-GDFNHLDVS 200

Query: 354 WSPQGDLIAFT--KFSGEKFAIGVMKK-------DGSQ---------------------- 382
           W+P G  + F   +     +  G +         DG                        
Sbjct: 201 WTPDGRGLVFAANRREDRDWYPGHVDLWYLSLSDDGQGQRSSAYTPPEGPGPDRCEAAEE 260

Query: 383 -------ERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTG---SKLYSIDLNGRNETL 430
                   RL   D      +P+ SP GR + F      ++G   + LY +D +      
Sbjct: 261 TQGNCMPVRLTPGDGTLACSSPSASPDGRMIAFLASDPAESGYGLTGLYVLDRSSGEIRQ 320

Query: 431 INT 433
           + T
Sbjct: 321 LAT 323



 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 108/351 (30%), Gaps = 109/351 (31%)

Query: 175 SRILFVSESVVSGIIKNS--LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +R+ +V + +     + +  + +       +R+    RD    +PR+SP+ + + + +  
Sbjct: 28  TRVAYVLQEIDKKKNEYTSSIWLAREGSPPVRFTAGPRD---TQPRWSPDGRHLVFVSNR 84

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------- 277
                    + +      ++I   +  +  P +S +G+    +                 
Sbjct: 85  SGS--NQLWLLSMEGGEARQITRIKGGVQNPVWSPDGRTIAFTANLTEAGIQPEGGDEDD 142

Query: 278 ---------------------------KDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                                       DE   I  VD+      +LT   F ++  S++
Sbjct: 143 QDLYRKYTKDVRVITRLHYKMDGVGFYTDERKHICVVDVDGGEPRQLTFGDFNHLDVSWT 202

Query: 311 PDSSQIVFESDR-------EGKEQLYVMQS--NGSDQK---------------------- 339
           PD   +VF ++R        G   L+ +    +G  Q+                      
Sbjct: 203 PDGRGLVFAANRREDRDWYPGHVDLWYLSLSDDGQGQRSSAYTPPEGPGPDRCEAAEETQ 262

Query: 340 ------RISQ-DKEASYFDPVWSPQGDLIAFTKFSG-----EKFAIGVMKKDGSQERLLV 387
                 R++  D   +   P  SP G +IAF              + V+ +   + R L 
Sbjct: 263 GNCMPVRLTPGDGTLACSSPSASPDGRMIAFLASDPAESGYGLTGLYVLDRSSGEIRQLA 322

Query: 388 ED----------SNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            D           +L  P+     WSP  R +  +    G    +L  +D 
Sbjct: 323 TDLDRPFGNETTGDLVPPSGGRLHWSPDARWIYATVSDGGQV--QLVRVDA 371



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 60/383 (15%), Positives = 119/383 (31%), Gaps = 110/383 (28%)

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR- 176
           +   D  RV + L ++  +K     ++ SS    R+ +  +        T  +   + R 
Sbjct: 22  QISPDGTRVAYVLQEIDKKK----NEYTSSIWLAREGSPPVRFTAGPRDTQPRWSPDGRH 77

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY----- 231
           ++FVS    S    N L ++  +G   R +T  +  +   P +SP+ + +A+        
Sbjct: 78  LVFVSNRSGS----NQLWLLSMEGGEARQITRIKGGV-QNPVWSPDGRTIAFTANLTEAG 132

Query: 232 --------DDEDILRVYLMDTRI---------------------------DRAPKRIGNF 256
                   DD+D+ R Y  D R+                              P+++   
Sbjct: 133 IQPEGGDEDDQDLYRKYTKDVRVITRLHYKMDGVGFYTDERKHICVVDVDGGEPRQLTFG 192

Query: 257 RSMILAPRFSSNGKRALISVQK-------DEAMDIYSVDL--QSNATE------------ 295
               L   ++ +G+  + +  +          +D++ + L                    
Sbjct: 193 DFNHLDVSWTPDGRGLVFAANRREDRDWYPGHVDLWYLSLSDDGQGQRSSAYTPPEGPGP 252

Query: 296 ----------------RLTNTLFI--NISASYSPDSSQIVF-ESDRE----GKEQLYVMQ 332
                           RLT         S S SPD   I F  SD      G   LYV+ 
Sbjct: 253 DRCEAAEETQGNCMPVRLTPGDGTLACSSPSASPDGRMIAFLASDPAESGYGLTGLYVLD 312

Query: 333 SNGSDQKRISQDKEASYFDP-------------VWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            +  + ++++ D +  + +               WSP    I  T   G +  +  +   
Sbjct: 313 RSSGEIRQLATDLDRPFGNETTGDLVPPSGGRLHWSPDARWIYATVSDGGQVQLVRVDAV 372

Query: 380 GSQERLLVEDSNLQAPTWS--PS 400
             +   +    +     +S  P 
Sbjct: 373 TGEVWPVT-GGDRVVYAFSLTPD 394



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 37/102 (36%), Gaps = 10/102 (9%)

Query: 350 FDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
            D   SP G  +A+       K +    +I + + +GS             P WSP GR 
Sbjct: 19  GDCQISPDGTRVAYVLQEIDKKKNEYTSSIWLAR-EGSPPVRFTAGPRDTQPRWSPDGRH 77

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVG 444
           L+F   + G    +L+ + + G     I        +P W  
Sbjct: 78  LVFVSNRSGSN--QLWLLSMEGGEARQITRIKGGVQNPVWSP 117



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 42/132 (31%), Gaps = 17/132 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFR- 257
           +R            P  SP+ + +A+   D       +  +Y++D       +   +   
Sbjct: 268 VRLTPGDGTLACSSPSASPDGRMIAFLASDPAESGYGLTGLYVLDRSSGEIRQLATDLDR 327

Query: 258 -------SMILAPR-----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                    ++ P      +S + +    +V     + +  VD  +     +T    +  
Sbjct: 328 PFGNETTGDLVPPSGGRLHWSPDARWIYATVSDGGQVQLVRVDAVTGEVWPVTGGDRVVY 387

Query: 306 SASYSPDSSQIV 317
           + S +PD  +  
Sbjct: 388 AFSLTPDCCRAA 399


>gi|226227728|ref|YP_002761834.1| tricorn protease [Gemmatimonas aurantiaca T-27]
 gi|226090919|dbj|BAH39364.1| tricorn protease [Gemmatimonas aurantiaca T-27]
          Length = 1113

 Score =  115 bits (288), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 49/243 (20%), Positives = 89/243 (36%), Gaps = 32/243 (13%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            S  ++L  P  S   Q +A+A  ++        +  R   A +R+ +F+ +   P+ S 
Sbjct: 30  QSGTRMLRSPSVSA--QSIAFAYANN------IWVVERAGGAARRLTSFQGVTQNPKLSP 81

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----- 322
           +G++   S +     D+Y V ++     RLT     ++   ++PD   +VF S R     
Sbjct: 82  DGRQVAFSAEYAGNTDVYVVPVEGGQPTRLTWHPSADVVQGWTPDGKSVVFASPRATWAP 141

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----------FSGEKF 371
            G  + + +   G  +   +       F    S  G  +A+               G+  
Sbjct: 142 SGAPRFWTVPVGGGVE---TAMPMPRAFQGKISTDGKRVAYRMPSSWDEERRNYRGGQNK 198

Query: 372 AIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            I ++              S    P W   G ++ F   +DG   S ++S D  GR    
Sbjct: 199 PIWILDLASFALDTTPFSGSKEMDPVWV--GDAVYFLSDRDG--VSNVWSYDTKGRALKQ 254

Query: 431 INT 433
           I T
Sbjct: 255 ITT 257



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 16/187 (8%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDR 322
             S+ GKRA +  +     +++++  +      LTN+     I+  +SPD   I + SDR
Sbjct: 320 TLSATGKRAAVEARG----EVFTIPAEKGDVRNLTNSSASAEIAPIWSPDGKSIAWFSDR 375

Query: 323 EGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            G+ QL +    G    R I   + +  + P WSP G  IAF       F I ++     
Sbjct: 376 SGEYQLVIAPQEGVGATREIVLPEPSRPYSPSWSPDGKTIAF---QDTHFRIWLVDVASG 432

Query: 382 QERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPA 435
           + ++   D          P WSP  R L +  K+       ++  ++  G  + L +  A
Sbjct: 433 KAKVADTDPYFMMDRSIVPVWSPDSRCLAYP-KRLKSLLRAIFVYEVETGAVKQLTDGMA 491

Query: 436 YASDPQW 442
            AS+P W
Sbjct: 492 DASNPAW 498



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 67/200 (33%), Gaps = 10/200 (5%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER- 296
            V+ +            +  S  +AP +S +GK       +     +     +     R 
Sbjct: 335 EVFTIPAEKGDVRNLTNSSASAEIAPIWSPDGKSIAWFSDRSGEYQLVIAPQEGVGATRE 394

Query: 297 -LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE---ASYFDP 352
            +        S S+SPD   I F+   +   +++++       K    D          P
Sbjct: 395 IVLPEPSRPYSPSWSPDGKTIAFQ---DTHFRIWLVDVASGKAKVADTDPYFMMDRSIVP 451

Query: 353 VWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKK 410
           VWSP    +A+ K        I V + +    + L +  ++   P W  SG+ L F    
Sbjct: 452 VWSPDSRCLAYPKRLKSLLRAIFVYEVETGAVKQLTDGMADASNPAWDASGKYLWFLAST 511

Query: 411 DGDTGSKLYSIDLNGRNETL 430
           +    S L  +    R ET 
Sbjct: 512 NFGLNSSLLDMSKFDRPETR 531



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 83/261 (31%), Gaps = 17/261 (6%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISD--------DIYQSITGEKGDFNSRILFVSES 183
           D      +  +  +      R   H I +         +               L  +  
Sbjct: 267 DASGNSVVFEQAGYVHELDARAGTHKIVNISAAGDFPWMMPQWKDVTARATGLTLSATGK 326

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             +   +  +  +  +  ++R LT S       P +SP+ + +A+ +    +   V    
Sbjct: 327 RAAVEARGEVFTIPAEKGDVRNLTNSSASAEIAPIWSPDGKSIAWFSDRSGEYQLVIAPQ 386

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
             +    + +    S   +P +S +GK       +D    I+ VD+ S   +      + 
Sbjct: 387 EGVGATREIVLPEPSRPYSPSWSPDGKTIAF---QDTHFRIWLVDVASGKAKVADTDPYF 443

Query: 304 NIS----ASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +       +SPDS  + +    +     ++V +      K+++ D  A   +P W   G
Sbjct: 444 MMDRSIVPVWSPDSRCLAYPKRLKSLLRAIFVYEVETGAVKQLT-DGMADASNPAWDASG 502

Query: 359 DLIAFTKFSGEKFAIGVMKKD 379
             + F   +       ++   
Sbjct: 503 KYLWFLASTNFGLNSSLLDMS 523



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 119/365 (32%), Gaps = 91/365 (24%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R   H  +D +     G   D  S +     +  +         +   G      T    
Sbjct: 110 RLTWHPSADVV----QGWTPDGKSVVFASPRATWAPSGAPRFWTVPVGGG---VETAMPM 162

Query: 212 QILFEPRFSPNQQKVAYAT----------YDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
              F+ + S + ++VAY            Y       ++++D           +  S  +
Sbjct: 163 PRAFQGKISTDGKRVAYRMPSSWDEERRNYRGGQNKPIWILDLASFALDTTPFSG-SKEM 221

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---------------- 305
            P +   G        +D   +++S D +  A +++T     ++                
Sbjct: 222 DPVW--VGDAVYFLSDRDGVSNVWSYDTKGRALKQITTFKDFDVKTLDASGNSVVFEQAG 279

Query: 306 --------------------------SASY------------SPDSSQIVFESDREGKEQ 327
                                        +            S    +   E+    + +
Sbjct: 280 YVHELDARAGTHKIVNISAAGDFPWMMPQWKDVTARATGLTLSATGKRAAVEA----RGE 335

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQER 384
           ++ + +   D + ++    ++   P+WSP G  IA+      ++ + +  ++G   ++E 
Sbjct: 336 VFTIPAEKGDVRNLTNSSASAEIAPIWSPDGKSIAWFSDRSGEYQLVIAPQEGVGATREI 395

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASD---- 439
           +L E S   +P+WSP G+++ F      DT  +++ +D+ +G+ +     P +  D    
Sbjct: 396 VLPEPSRPYSPSWSPDGKTIAFQ-----DTHFRIWLVDVASGKAKVADTDPYFMMDRSIV 450

Query: 440 PQWVG 444
           P W  
Sbjct: 451 PVWSP 455



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 50/296 (16%), Positives = 105/296 (35%), Gaps = 34/296 (11%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           + + G    R   VS   ++    N++ V++R G   R LT S   +   P+ SP+ ++V
Sbjct: 28  SAQSGTRMLRSPSVSAQSIAFAYANNIWVVERAGGAARRLT-SFQGVTQNPKLSPDGRQV 86

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-----DEA 281
           A++     +   VY++       P R+    S  +   ++ +GK  + +  +       A
Sbjct: 87  AFSAEYAGNT-DVYVVPVE-GGQPTRLTWHPSADVVQGWTPDGKSVVFASPRATWAPSGA 144

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF----------ESDREGKEQ-LYV 330
              ++V +       +            S D  ++ +           + R G+ + +++
Sbjct: 145 PRFWTVPVGGGVETAMPMPRAFQ--GKISTDGKRVAYRMPSSWDEERRNYRGGQNKPIWI 202

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +    S     +    +   DPVW   GD + F         +      G   + +    
Sbjct: 203 LDLA-SFALDTTPFSGSKEMDPVWV--GDAVYFLSDRDGVSNVWSYDTKGRALKQITTFK 259

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA----SDPQW 442
           +    T   SG S++F      +    ++ +D       ++N  A        PQW
Sbjct: 260 DFDVKTLDASGNSVVF------EQAGYVHELDARAGTHKIVNISAAGDFPWMMPQW 309


>gi|156742232|ref|YP_001432361.1| WD40 domain-containing protein [Roseiflexus castenholzii DSM 13941]
 gi|156233560|gb|ABU58343.1| WD40 domain protein beta Propeller [Roseiflexus castenholzii DSM
           13941]
          Length = 348

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 88/258 (34%), Gaps = 36/258 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI----------- 260
                P +SP+  ++ +   D        +       AP R+ +  S             
Sbjct: 81  GAASHPAWSPDGARIVFVQRD--QSFSDLMALPLDGGAPLRLTDNGSNQPRNSFERIRES 138

Query: 261 ---LAPRFSSNGKRALISVQ---------KDEAMDIYSVDLQSNATERLT--NTLFINIS 306
                P F+ +G+    + Q          +  + ++S+  Q+    RL   +       
Sbjct: 139 IWAFYPSFAPDGQTIAFASQYAPPSGAPAAEYHLALFSMPAQAGGARRLIYADDAGHVGR 198

Query: 307 ASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +++PD S IVF    +   G  Q+                   SY DP +SP G  +AF
Sbjct: 199 VTHAPDGSAIVFVLEPATTGGVSQILRYDRATGAVTPQPGIPPQSY-DPAFSPDGRWLAF 257

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G++  I  +   G     L      +AP +SP GR + F      + G  L+  DL
Sbjct: 258 AGRDGDRTDIFAIPTAGGTIVRLTSIGTARAPAFSPDGRMIAFLAVAPAEIGFDLWVADL 317

Query: 424 NGRNETLINTPAYASDPQ 441
                 +I     AS P+
Sbjct: 318 -----RMIGDSLQASTPR 330



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 76/230 (33%), Gaps = 33/230 (14%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-------------ILFEPRFSPN 222
           RI+FV          + L  +  DG     LT +                  F P F+P+
Sbjct: 94  RIVFVQ----RDQSFSDLMALPLDGGAPLRLTDNGSNQPRNSFERIRESIWAFYPSFAPD 149

Query: 223 QQKVAYATYDDEDI--------LRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRAL 273
            Q +A+A+              L ++ M  +   A + I  +    +     + +G   +
Sbjct: 150 GQTIAFASQYAPPSGAPAAEYHLALFSMPAQAGGARRLIYADDAGHVGRVTHAPDGSAIV 209

Query: 274 ISVQK---DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             ++         I   D  + A          +   ++SPD   + F      +  ++ 
Sbjct: 210 FVLEPATTGGVSQILRYDRATGAVTPQPGIPPQSYDPAFSPDGRWLAFAGRDGDRTDIFA 269

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKK 378
           + + G    R++    A    P +SP G +IAF   +     F + V   
Sbjct: 270 IPTAGGTIVRLTSIGTA--RAPAFSPDGRMIAFLAVAPAEIGFDLWVADL 317



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 74/208 (35%), Gaps = 40/208 (19%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R L +  +D  + ++      +   RL          ++SPD ++IVF    +    L  
Sbjct: 57  RLLFA--RDGNVWLWQ-----DQAGRLLTGAGAASHPAWSPDGARIVFVQRDQSFSDLMA 109

Query: 331 MQSNGSDQKRISQDKEA-------------SYFDPVWSPQGDLIAFTKF-------SGEK 370
           +  +G    R++ +                  F P ++P G  IAF             +
Sbjct: 110 LPLDGGAPLRLTDNGSNQPRNSFERIRESIWAFYPSFAPDGQTIAFASQYAPPSGAPAAE 169

Query: 371 FAIGVMKK---DGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSID-L 423
           + + +       G   RL+  D   ++   T +P G +++F  +     G S++   D  
Sbjct: 170 YHLALFSMPAQAGGARRLIYADDAGHVGRVTHAPDGSAIVFVLEPATTGGVSQILRYDRA 229

Query: 424 NGRNETLIN------TPAYASDPQWVGF 445
            G              PA++ D +W+ F
Sbjct: 230 TGAVTPQPGIPPQSYDPAFSPDGRWLAF 257


>gi|148655768|ref|YP_001275973.1| WD40 domain-containing protein [Roseiflexus sp. RS-1]
 gi|148567878|gb|ABQ90023.1| WD40 domain protein beta Propeller [Roseiflexus sp. RS-1]
          Length = 347

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 54/263 (20%), Positives = 91/263 (34%), Gaps = 42/263 (15%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS----------- 258
            D    +P ++P+   +AY   D        ++       P R+ N  S           
Sbjct: 78  GDDQAVQPVWAPDGSAIAYIQRDQSS--SDLMIAPLDGGGPLRLTNNGSRHPPGSFERIS 135

Query: 259 ---MILAPRFSSNGKRALISVQ---------KDEAMDIYSVDLQSNATERL-----TNTL 301
                  P F+ +G+    + Q          +  + ++++  Q     RL     T  +
Sbjct: 136 DSVWAFYPSFAPDGQTIAYASQYAPPSGSPAAEYHLALFTIPAQPGGVRRLIYADDTGHV 195

Query: 302 FINISASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   +PD S IVF    +   G  Q+               D  +  +DP +SP G
Sbjct: 196 GRVTH---TPDGSAIVFTLEPAYAGGSSQIMRYDRTTGTVAP-QPDVPSGSYDPAFSPDG 251

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +AF    G++  I  +   G     L      +AP +SP GR + F     G+TG  L
Sbjct: 252 RWLAFAGRDGDRTDIFAVPAAGGTIVRLTGLGTARAPAFSPDGRRIAFLAVAPGETGFDL 311

Query: 419 YSIDLNGRNETLINTPAYASDPQ 441
           +  D+      +I     AS P+
Sbjct: 312 WVADI-----RIIGDSIQASSPR 329



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 76/238 (31%), Gaps = 34/238 (14%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQ-------------ILFEPRFSPNQQKVAYAT-Y 231
                + L +   DG     LT +  +               F P F+P+ Q +AYA+ Y
Sbjct: 99  RDQSSSDLMIAPLDGGGPLRLTNNGSRHPPGSFERISDSVWAFYPSFAPDGQTIAYASQY 158

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFR--------SMILAPRFSSNGKRALISVQ---KDE 280
                         +   P + G  R          +     + +G   + +++      
Sbjct: 159 APPSGSPAAEYHLALFTIPAQPGGVRRLIYADDTGHVGRVTHTPDGSAIVFTLEPAYAGG 218

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           +  I   D  +       +    +   ++SPD   + F      +  ++ + + G    R
Sbjct: 219 SSQIMRYDRTTGTVAPQPDVPSGSYDPAFSPDGRWLAFAGRDGDRTDIFAVPAAGGTIVR 278

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPT 396
           ++     +   P +SP G  IAF   +     F + V        R++ +     +P 
Sbjct: 279 LT--GLGTARAPAFSPDGRRIAFLAVAPGETGFDLWVAD-----IRIIGDSIQASSPR 329



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 40/208 (19%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R L    +D  + ++  D                +   ++PD S I +    +    L +
Sbjct: 56  RLLFV--RDGTIWMWQ-DQTGRPLI----GDDQAVQPVWAPDGSAIAYIQRDQSSSDLMI 108

Query: 331 MQSNGSDQKRISQDKEA-------------SYFDPVWSPQGDLIAFTKF---------SG 368
              +G    R++ +                  F P ++P G  IA+            + 
Sbjct: 109 APLDGGGPLRLTNNGSRHPPGSFERISDSVWAFYPSFAPDGQTIAYASQYAPPSGSPAAE 168

Query: 369 EKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKD-GDTGSKLYSID-L 423
              A+  +       R L+   +  ++   T +P G +++F+ +       S++   D  
Sbjct: 169 YHLALFTIPAQPGGVRRLIYADDTGHVGRVTHTPDGSAIVFTLEPAYAGGSSQIMRYDRT 228

Query: 424 NGRNETLIN------TPAYASDPQWVGF 445
            G      +       PA++ D +W+ F
Sbjct: 229 TGTVAPQPDVPSGSYDPAFSPDGRWLAF 256


>gi|153808186|ref|ZP_01960854.1| hypothetical protein BACCAC_02472 [Bacteroides caccae ATCC 43185]
 gi|149129089|gb|EDM20305.1| hypothetical protein BACCAC_02472 [Bacteroides caccae ATCC 43185]
          Length = 1095

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 86/236 (36%), Gaps = 34/236 (14%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            + + R SPN  ++ +      DI +V            ++    S    P +S +GK+ 
Sbjct: 24  WMRDARISPNGTEIVFCY--KGDIYKVPAQ----GGTAVQLTTQASYEANPVWSPDGKQI 77

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGK---- 325
             +  ++   D++ +       +RLT      I ++++PD   ++F +   D  G     
Sbjct: 78  AFASDRNGNFDLFIMPADGGTAQRLTYHSASEIPSAFTPDGKFVLFSASIQDPAGSALFP 137

Query: 326 ----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGE 369
                +LY + + G   +++     A +     S  G    +               S  
Sbjct: 138 TGAMTELYKVPAGGGRTEQVL-ATPAEWVCFDKS--GKNFLYQDRKGFEDEWRKHHTSSI 194

Query: 370 KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              I +      +   L   +   + P ++P G S+ F  +++G +   +Y+  LN
Sbjct: 195 TRDIWLYNTQSGKHTNLTNREGEDRNPVYAPDGNSVYFLSERNGGS-FNVYNFSLN 249



 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 80/220 (36%), Gaps = 34/220 (15%)

Query: 253 IGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +    S  + P +      S NG   +   + D    IY V  Q     +LT       +
Sbjct: 12  LTALSSYAITPLWMRDARISPNGTEIVFCYKGD----IYKVPAQGGTAVQLTTQASYEAN 67

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPD  QI F SDR G   L++M ++G   +R++    AS     ++P G  + F+  
Sbjct: 68  PVWSPDGKQIAFASDRNGNFDLFIMPADGGTAQRLTY-HSASEIPSAFTPDGKFVLFSAS 126

Query: 367 -----------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD---- 411
                      +G    +  +   G +   ++     +   +  SG++ ++  +K     
Sbjct: 127 IQDPAGSALFPTGAMTELYKVPAGGGRTEQVLATP-AEWVCFDKSGKNFLYQDRKGFEDE 185

Query: 412 ------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                       ++  +  +G++  L N      +P +  
Sbjct: 186 WRKHHTSSITRDIWLYNTQSGKHTNLTNREGEDRNPVYAP 225



 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 59/304 (19%), Positives = 111/304 (36%), Gaps = 33/304 (10%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           + +Y       G FN     ++ S  S + +    +       +R+L+ S    L    +
Sbjct: 228 NSVYFLSERNGGSFNVYNFSLNTSQTSNVPQEVKTITTFRTHPVRFLSISDKGTLC---Y 284

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + + +   Y    +    +V +   R D        F     +   S +GK+    V+ D
Sbjct: 285 TYDGE--LYTQEANARPKKVNVELVRDDEKEIASLKFSQGATSASVSPDGKQVAFIVRGD 342

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM-------- 331
               ++        T+++TNT     + S++PD+  +V+ S+R G  QLY          
Sbjct: 343 ----VFVTSTDYTTTKQITNTPGKEAAVSFAPDNRTLVYASERTGNWQLYTAKIARKEEA 398

Query: 332 ---QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   +++ +   K      P +SP G  +AF +       + V+     + R + +
Sbjct: 399 NFPNATLIEEEVLLPSKTVERAYPQYSPDGKELAFIEDRN---RLMVLDLKTKKVRQVTD 455

Query: 389 DSNLQ------APTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS-D 439
            S            WSP G+   L F   +  D  S +  +   G   T +    Y S  
Sbjct: 456 GSTWYNTGGGFDYEWSPDGKWFTLEFIGNRH-DPYSDIGIVSAQGGTITNLTNSGYISGS 514

Query: 440 PQWV 443
           P+WV
Sbjct: 515 PRWV 518



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 75/215 (34%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++VA+    D        + +      K+I N      A  F+ + +  + + +
Sbjct: 327 SVSPDGKQVAFIVRGD------VFVTSTDYTTTKQITNTPGKEAAVSFAPDNRTLVYASE 380

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS------------ASYSPDSSQIVFESDREGK 325
           +     +Y+  +         N   I                 YSPD  ++ F  DR   
Sbjct: 381 RTGNWQLYTAKIARKEEANFPNATLIEEEVLLPSKTVERAYPQYSPDGKELAFIEDR--- 437

Query: 326 EQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  IG++  
Sbjct: 438 NRLMVLDLKTKKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDIGIVSA 497

Query: 379 DGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G     L     +  +P W   G +++F  ++ G
Sbjct: 498 QGGTITNLTNSGYISGSPRWVLDGNAILFQTERYG 532



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 79/219 (36%), Gaps = 32/219 (14%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +       
Sbjct: 41  YKGDIYKVPAQGGTAVQLTTQAS-YEANPVWSPDGKQIAFASDRNGNFDLFIM--PADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERL 297
             +R+    +  +   F+ +GK  L S                  ++Y V      TE++
Sbjct: 98  TAQRLTYHSASEIPSAFTPDGKFVLFSASIQDPAGSALFPTGAMTELYKVPAGGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  +       ++ +
Sbjct: 158 LATPAEWV--CFDKSGKNFLYQ-DRKGFEDEWRKHHTSSITRDIWLYNTQSGKHTNLT-N 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQ 382
           +E    +PV++P G+ + F ++ +G  F +     + SQ
Sbjct: 214 REGEDRNPVYAPDGNSVYFLSERNGGSFNVYNFSLNTSQ 252



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 60/368 (16%), Positives = 128/368 (34%), Gaps = 59/368 (16%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK     V   ++ V        K+  ++P     ++    +      +   G+
Sbjct: 326 ASVSPDGKQVAFIVRGDVF-VTSTDYTTTKQITNTPGKEAAVSFAPDNRTLVYASERTGN 384

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +      ++    +     +L            L PS+      P++SP+ +++A+    
Sbjct: 385 WQLYTAKIARKEEANFPNATLI-------EEEVLLPSKTVERAYPQYSPDGKELAFI--- 434

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRA---LISVQKDEAMDI 284
            ED  R+ ++D +  +  +++ +              +S +GK      I  + D   DI
Sbjct: 435 -EDRNRLMVLDLKT-KKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDI 492

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----------QLYVMQS 333
             V  Q      LTN+ +I+ S  +  D + I+F+++R G              L  +  
Sbjct: 493 GIVSAQGGTITNLTNSGYISGSPRWVLDGNAILFQTERYGMRAHASWGSQQDVMLVFLNQ 552

Query: 334 NGSDQKRISQDKE--------------------ASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +  D+ R+S++                                  D  +  K   +   +
Sbjct: 553 DAYDRYRLSKEDFELLKELEKEQKKAKDGDKKKDVNKSKKDEADEDKSSEDKADKKDIVV 612

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETL 430
            +   +    RL    S+L +   S  G +L +    +G  G  L+ ++L   + +    
Sbjct: 613 ELNGIEDRIVRLTPNSSDLGSAILSKDGENLYYFSAFEG--GYDLWKMNLREKDTKRLHK 670

Query: 431 INTPAYAS 438
           +NT  +AS
Sbjct: 671 LNT-GWAS 677


>gi|160882853|ref|ZP_02063856.1| hypothetical protein BACOVA_00815 [Bacteroides ovatus ATCC 8483]
 gi|156111717|gb|EDO13462.1| hypothetical protein BACOVA_00815 [Bacteroides ovatus ATCC 8483]
          Length = 1119

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 80/236 (33%), Gaps = 34/236 (14%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            + + R SP+  ++ +      DI +V            ++    S    P +S +GK+ 
Sbjct: 24  WMRDARISPDGSEIVFCY--KGDIYKVPAQ----GGTAVQLTTQTSYEANPVWSPDGKQI 77

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
             +  ++   D++ +     A  RLT      I ++++PD   + F +            
Sbjct: 78  AFASDRNGNFDLFIMPADGGAARRLTYHSASEIPSAFTPDGKYVFFSASIQDPASSALFP 137

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGE 369
                +LY +   G   +++     A       +  G    +               S  
Sbjct: 138 TGAMTELYKVPVAGGRTEQVL-GTPAELVCFDKT--GKNFLYQDRKGFEDEWRKHHTSSI 194

Query: 370 KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              I +      +   L       + P ++P G ++ F  ++DG +   +Y+  LN
Sbjct: 195 TRDIWLYNTQTGKHTNLTNRGGEDRNPVYAPDGNAVYFLSERDGGS-FNVYTFFLN 249



 Score =  113 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 34/221 (15%)

Query: 252 RIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +    S  + P +      S +G   +   + D    IY V  Q     +LT       
Sbjct: 11  VLSALSSYAITPLWMRDARISPDGSEIVFCYKGD----IYKVPAQGGTAVQLTTQTSYEA 66

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  +SPD  QI F SDR G   L++M ++G   +R++    AS     ++P G  + F+ 
Sbjct: 67  NPVWSPDGKQIAFASDRNGNFDLFIMPADGGAARRLTY-HSASEIPSAFTPDGKYVFFSA 125

Query: 366 F-----------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--- 411
                       +G    +  +   G +   ++     +   +  +G++ ++  +K    
Sbjct: 126 SIQDPASSALFPTGAMTELYKVPVAGGRTEQVLGTP-AELVCFDKTGKNFLYQDRKGFED 184

Query: 412 -------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                        ++  +   G++  L N      +P +  
Sbjct: 185 EWRKHHTSSITRDIWLYNTQTGKHTNLTNRGGEDRNPVYAP 225



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 59/304 (19%), Positives = 108/304 (35%), Gaps = 39/304 (12%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           + +Y     + G FN    F+         +    V       +R+L+ S    L    +
Sbjct: 228 NAVYFLSERDGGSFNVYTFFL------NTPQEVKAVTTFKTHPVRFLSVSDKGTLC---Y 278

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + + +   Y         +V +   R D        F     +   S +GK+    V+ D
Sbjct: 279 TYDGE--LYTQKSGARPEKVKVELVRDDEQQLATLKFSQGATSASVSPDGKQIAFIVRGD 336

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM-------- 331
               ++        T+++TNT     + S++PD+  +V+ S+R G  QLY          
Sbjct: 337 ----VFVTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASERTGNWQLYTAKISRKEDP 392

Query: 332 ---QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +   +++ +   K      P +SP G  +AF +       + V+     + R + +
Sbjct: 393 NFPNATLIEEEVLLPSKTVERTYPQYSPDGKELAFIEDRN---RLMVLNLKTKKVRQVTD 449

Query: 389 DSNLQ------APTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS-D 439
            S            WSP G+   L F   +  D  S +  +   G   T +    Y S  
Sbjct: 450 GSTWYNTGGGFDYEWSPDGKWFTLEFIGNRH-DPYSDVGIVSAQGGAITNLTNSGYISGA 508

Query: 440 PQWV 443
           P+WV
Sbjct: 509 PRWV 512



 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 76/215 (35%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A+    D        + +      K+I N  +   A  F+ + +  + + +
Sbjct: 321 SVSPDGKQIAFIVRGD------VFVTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN------------ISASYSPDSSQIVFESDREGK 325
           +     +Y+  +         N   I                 YSPD  ++ F  DR   
Sbjct: 375 RTGNWQLYTAKISRKEDPNFPNATLIEEEVLLPSKTVERTYPQYSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  +G++  
Sbjct: 432 NRLMVLNLKTKKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDVGIVSA 491

Query: 379 DGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G     L     +  AP W   G +++F  ++ G
Sbjct: 492 QGGAITNLTNSGYISGAPRWVLDGNAILFQTERYG 526



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 78/234 (33%), Gaps = 32/234 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +       
Sbjct: 41  YKGDIYKVPAQGGTAVQLTTQTS-YEANPVWSPDGKQIAFASDRNGNFDLFIM--PADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERL 297
           A +R+    +  +   F+ +GK    S                  ++Y V +    TE++
Sbjct: 98  AARRLTYHSASEIPSAFTPDGKYVFFSASIQDPASSALFPTGAMTELYKVPVAGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  +       ++  
Sbjct: 158 LGTPAELV--CFDKTGKNFLYQ-DRKGFEDEWRKHHTSSITRDIWLYNTQTGKHTNLTNR 214

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 +PV++P G+ + F ++  G  F +     +  QE   V         +
Sbjct: 215 G-GEDRNPVYAPDGNAVYFLSERDGGSFNVYTFFLNTPQEVKAVTTFKTHPVRF 267



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 85/220 (38%), Gaps = 22/220 (10%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK     V   ++ V        K+  ++PA    ++    +      +   G+
Sbjct: 320 ASVSPDGKQIAFIVRGDVF-VTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASERTGN 378

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +      +S          +L            L PS+      P++SP+ +++A+    
Sbjct: 379 WQLYTAKISRKEDPNFPNATLI-------EEEVLLPSKTVERTYPQYSPDGKELAFI--- 428

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRA---LISVQKDEAMDI 284
            ED  R+ +++ +  +  +++ +              +S +GK      I  + D   D+
Sbjct: 429 -EDRNRLMVLNLKT-KKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDV 486

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
             V  Q  A   LTN+ +I+ +  +  D + I+F+++R G
Sbjct: 487 GIVSAQGGAITNLTNSGYISGAPRWVLDGNAILFQTERYG 526


>gi|269926814|ref|YP_003323437.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermobaculum terrenum ATCC BAA-798]
 gi|269790474|gb|ACZ42615.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermobaculum terrenum ATCC BAA-798]
          Length = 594

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 6/179 (3%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
              A   S +GK+            ++   +     +++T          +SPD S++VF
Sbjct: 14  NAYAGSISPSGKQVAFLYDVTGVPQVWITSIDGQWPDQVTYFEERVSGVKFSPDGSRLVF 73

Query: 319 ESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIG 374
             D  G E+  ++ +  +G   + I  +    +    WSP G  IA+T        F + 
Sbjct: 74  IMDAGGNERHGIHGVLLDGYVHEPIQPEPNVIHLWGDWSPDGRRIAYTSNKRDPRFFDVY 133

Query: 375 VMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +   DG     +L +D     P WSP  R LI SR +  +  + +Y +DL   +  L++
Sbjct: 134 IKSLDGGDPIMVLQDDGTNSVPAWSPDARHLIVSRSET-NLDNNIYLLDLESGDRKLLS 191



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/331 (15%), Positives = 111/331 (33%), Gaps = 18/331 (5%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G +   GK   +V F L+DV    Q+      S    W        + +        G  
Sbjct: 18  GSISPSGK---QVAF-LYDVTGVPQV---WITSIDGQWPDQVTYFEERVSGVKFSPDG-- 68

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            SR++F+ ++   G  ++ +  +  DG     + P  + I     +SP+ +++AY +   
Sbjct: 69  -SRLVFIMDAG--GNERHGIHGVLLDGYVHEPIQPEPNVIHLWGDWSPDGRRIAYTSNKR 125

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSN 292
           +       + +     P  +         P +S + +  ++S  + +   +IY +DL+S 
Sbjct: 126 DPRFFDVYIKSLDGGDPIMVLQDDGTNSVPAWSPDARHLIVSRSETNLDNNIYLLDLESG 185

Query: 293 ATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             + L+        +S  +      IV  +       +  +  N  D + +  + +    
Sbjct: 186 DRKLLSQHEGEALFVSPHFIGSDRLIVASNKDREFVGVAEIDLNDGDFRYLI-ETDWDVD 244

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGV-MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               S  G  I +         + +           +      Q    S  G +LI S  
Sbjct: 245 SLTVSKDGSKIVYALNEDGYSRLYIWQDGHIRALEYIPSGVLAQQLELSDDGSTLILSMY 304

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                   ++++D++      +     A  P
Sbjct: 305 SP-SLNLNVWAVDVSSDRCWQVTYAGRAGIP 334


>gi|150009324|ref|YP_001304067.1| putative Tricorn-like protease [Parabacteroides distasonis ATCC
           8503]
 gi|149937748|gb|ABR44445.1| putative Tricorn-like protease [Parabacteroides distasonis ATCC
           8503]
          Length = 1076

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 71/204 (34%), Gaps = 30/204 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G+    S Q D    IY+V        +LT     +    +SPD  +I F S+R 
Sbjct: 30  AISPDGQTIAFSYQGD----IYTVPSSGGKARQLTTHPAHDTRPVWSPDGQKIAFASNRS 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF-A 372
           G   +++M   G + KR++     + +   +   G  I +           +F G +F  
Sbjct: 86  GNFDVFLMNKEGGEPKRLTT-HSTNEYPTTFKDNG-HILYLANILQDAKDIQFPGTRFMQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSID 422
           +  +  DG +   L     ++    S  G  L+++  K                 ++   
Sbjct: 144 VYEISTDGGRPD-LYSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSITRDIWLCT 202

Query: 423 L--NGRNETLINTPAYASDPQWVG 444
           L  +   + +        +P W  
Sbjct: 203 LGKDRSFQKVTTFGGEDRNPVWAA 226



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 80/242 (33%), Gaps = 39/242 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ Q +A++     DI  V           +++    +    P +S +G++   +  
Sbjct: 30  AISPDGQTIAFSY--QGDIYTV----PSSGGKARQLTTHPAHDTRPVWSPDGQKIAFASN 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------------FESDREGK 325
           +    D++ ++ +    +RLT         ++  +   +             F   R   
Sbjct: 84  RSGNFDVFLMNKEGGEPKRLTTHSTNEYPTTFKDNGHILYLANILQDAKDIQFPGTR--F 141

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAI 373
            Q+Y + ++G    R          +   S  G  + +               S     I
Sbjct: 142 MQVYEISTDGG---RPDLYSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSITRDI 198

Query: 374 GVMKK--DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +     D S +++       + P W+  G S  +  ++ G     ++  DL G +E  I
Sbjct: 199 WLCTLGKDRSFQKVTTFGGEDRNPVWAADGASFYYLSEEKGSF--NIFKKDLAGNSEKQI 256

Query: 432 NT 433
            T
Sbjct: 257 TT 258



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 57/305 (18%), Positives = 116/305 (38%), Gaps = 46/305 (15%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ EKG FN     + +  ++G  +  +         +R+LT      L    +S +
Sbjct: 231 FYYLSEEKGSFN-----IFKKDLAGNSEKQITT--HTTHPVRFLTSDNSGTLC---YSYD 280

Query: 223 QQKVAYATYDDEDILRVYLM----DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            +   Y   + +   +V +         D   + + +  + I     S NGK      + 
Sbjct: 281 GE--IYTVKEGQKPAKVNIQIVADKIENDVIHRLLTDGATDI---AVSPNGKEVAFITRG 335

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D    +Y   ++   T ++TNT     +  +SPD   +V+ ++REG   +Y  +    + 
Sbjct: 336 D----VYVTSIEYETTRQITNTPQQERNIDFSPDGRSLVYSAEREGTWGIYESKLTRDED 391

Query: 339 KRISQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           K+ +   E           + F P++SP G+ +AF +       + V+ +   Q R +++
Sbjct: 392 KQFTYAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLENRTT---LRVINRKTKQVRTVLD 448

Query: 389 DSNLQAPT-------WSPSGRSLIFSRKKDGDTGS---KLYSIDLNGRNETLINTPAYAS 438
              L + +       WSP  +  +      G   +    L   D +G    L  +     
Sbjct: 449 GKYLYSYSDGDQHFQWSPDSKWFLVDYISVGGWNNTDIALVKADGSGEVTNLTESGYSDG 508

Query: 439 DPQWV 443
           D +WV
Sbjct: 509 DAKWV 513



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 85/237 (35%), Gaps = 37/237 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN ++VA+ T  D     VY+         ++I N         FS +G+  + S +
Sbjct: 321 AVSPNGKEVAFITRGD-----VYVTSIEY-ETTRQITNTPQQERNIDFSPDGRSLVYSAE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTL---------FINIS--ASYSPDSSQIVFESDREGKE 326
           ++    IY   L  +  ++ T                S    YSPD +++ F  +R    
Sbjct: 375 REGTWGIYESKLTRDEDKQFTYAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLENRT--- 431

Query: 327 QLYVMQSNGSDQKRISQDKE-ASYFDPV----WSPQGDL--IAFTKFSG-EKFAIGVMKK 378
            L V+       + +   K   SY D      WSP      + +    G     I ++K 
Sbjct: 432 TLRVINRKTKQVRTVLDGKYLYSYSDGDQHFQWSPDSKWFLVDYISVGGWNNTDIALVKA 491

Query: 379 DGSQE-RLLVEDSNLQAPT-WSPSGRSLIFSRKKDG-------DTGSKLYSIDLNGR 426
           DGS E   L E         W   G+++I+S  + G            +Y +  +G 
Sbjct: 492 DGSGEVTNLTESGYSDGDAKWVLDGKAMIWSSDRAGFRSHGSWGAERDVYIMFFDGE 548



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 89/257 (34%), Gaps = 42/257 (16%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILR------- 238
           G     +  +  DG             +     S +  K+ Y  Y   ED  R       
Sbjct: 138 GTRFMQVYEISTDGGRPDL---YSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSI 194

Query: 239 ---VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              ++L     DR+ +++  F      P ++++G       ++  + +I+  DL  N+ +
Sbjct: 195 TRDIWLCTLGKDRSFQKVTTFGGEDRNPVWAADGASFYYLSEEKGSFNIFKKDLAGNSEK 254

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK---------------- 339
           ++T      +    S +S  + +  D     ++Y ++      K                
Sbjct: 255 QITTHTTHPVRFLTSDNSGTLCYSYD----GEIYTVKEGQKPAKVNIQIVADKIENDVIH 310

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWS 398
           R+  D      D   SP G  +AF         + V   +    R +      +    +S
Sbjct: 311 RLLTDG---ATDIAVSPNGKEVAFITRGD----VYVTSIEYETTRQITNTPQQERNIDFS 363

Query: 399 PSGRSLIFSRKKDGDTG 415
           P GRSL++S +++G  G
Sbjct: 364 PDGRSLVYSAEREGTWG 380



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 7/83 (8%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKK 410
              SP G  IAF+        I  +   G + R L    ++   P WSP G+ + F+  +
Sbjct: 29  CAISPDGQTIAFSYQGD----IYTVPSSGGKARQLTTHPAHDTRPVWSPDGQKIAFASNR 84

Query: 411 DGDTGSKLYSIDLNGRNETLINT 433
            G+    ++ ++  G     + T
Sbjct: 85  SGNF--DVFLMNKEGGEPKRLTT 105



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 94/261 (36%), Gaps = 42/261 (16%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  +  +   G   R LT         P +SP+ QK+A+A+    +   V+LM+ +  
Sbjct: 41  SYQGDIYTVPSSGGKARQLTTHPAH-DTRPVWSPDGQKIAFASNRSGN-FDVFLMN-KEG 97

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI----------YSVDLQSNATERL 297
             PKR+    +      F  NG    ++    +A DI          Y +       +  
Sbjct: 98  GEPKRLTTHSTNEYPTTFKDNGHILYLANILQDAKDIQFPGTRFMQVYEISTDGGRPDLY 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLY---------------VMQSNGSDQKRIS 342
           ++    NI  + S D S++++  D +G E  +                +  + S QK  +
Sbjct: 158 SSLYMENI--ALSKDGSKLLYN-DYKGYEDPWRKHHQSSITRDIWLCTLGKDRSFQKVTT 214

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPS 400
              E    +PVW+  G    +       F I      G+ E+ +   +      +  S +
Sbjct: 215 FGGE--DRNPVWAADGASFYYLSEEKGSFNIFKKDLAGNSEKQITTHTTHPV-RFLTSDN 271

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
             +L +S         ++Y++
Sbjct: 272 SGTLCYSYD------GEIYTV 286



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 14/141 (9%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             Q  F+P +SP+  +VA+        ++       R     K + ++       ++S +
Sbjct: 408 SGQTSFQPLYSPDGNEVAFLENRTTLRVINRKTKQVRTVLDGKYLYSYSDGDQHFQWSPD 467

Query: 269 GKRALI---SVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG 324
            K  L+   SV      DI  V          LT + + +  A +  D   +++ SDR G
Sbjct: 468 SKWFLVDYISVGGWNNTDIALVKADGSGEVTNLTESGYSDGDAKWVLDGKAMIWSSDRAG 527

Query: 325 ---------KEQLYVMQSNGS 336
                    +  +Y+M  +G 
Sbjct: 528 FRSHGSWGAERDVYIMFFDGE 548


>gi|299139377|ref|ZP_07032552.1| WD40 domain protein beta Propeller [Acidobacterium sp. MP5ACTX8]
 gi|298598646|gb|EFI54809.1| WD40 domain protein beta Propeller [Acidobacterium sp. MP5ACTX8]
          Length = 751

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 52/238 (21%), Positives = 99/238 (41%), Gaps = 8/238 (3%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF- 256
             G       PS D+    P +SP+   VA+ +        V+L  T  D AP ++ +F 
Sbjct: 470 ATGGGAHTPLPS-DKTDSSPVYSPDGHSVAFVSTRSGWG-EVWLYRTGSD-APVQLTHFH 526

Query: 257 -RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
              ++  P +S +G+    S +K  A ++   DL S++   LT T   + +  YS D + 
Sbjct: 527 GEGLVFPPSWSPDGRSIAFSFRKYGATNLMVCDLASHSIRTLTTTRKRDFNPVYSADGAY 586

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + F S+ +G   ++ M+ +G+ +      +  + F P  S  G  + F +   +      
Sbjct: 587 LFFSSNEDGTSSIWRMRVDGTGRPEPLFVEAVASFLP--SADGRWLYFIEQGAQLSLSRR 644

Query: 376 MKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              DGS E++  V        T + +G  +  +  +     S ++ ID   R   ++ 
Sbjct: 645 SLVDGSTEQIFQVAGRATFTDTIAIAGNHVYVAVSESDLAVSDIFEIDPTTRRAHVVA 702



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 56/344 (16%), Positives = 107/344 (31%), Gaps = 63/344 (18%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           D++   T +              +  G  ++ + + D  G                P +S
Sbjct: 198 DLFTGNTTDSAWSPDGRWLAVAMIPHGEDQSHIYIQDVHGDASPVRLTEGSLAETRPVWS 257

Query: 221 PNQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALIS 275
           P+ +++A+         +++R  L    ++   K +  +      P   +SS+G+  L +
Sbjct: 258 PDGREIAFTRRVDMSHFEVVRFNLAAKTLNTVGKFVSYWPIGDDHPALDWSSDGRFLLTT 317

Query: 276 VQ--KDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYV 330
            Q      M I  + + +     +T+       +I A +SPD S I F   R G   LY+
Sbjct: 318 EQPVAGNPMRIVLISVATGERTSVTSPPIGSSGDIDAKFSPDGSWIAFR--RGGLGDLYM 375

Query: 331 MQSNGSDQK---RISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERL 385
           +   G   K   R++ D +       W   G  I +     E   + +  + +DG   + 
Sbjct: 376 VSVKGEQVKPATRLTFDTDG-VRGLAWIDHGRSILYGTQRNETTPYGLWRITRDGGTPQP 434

Query: 386 LV--------------------------------------------EDSNLQAPTWSPSG 401
           +                                              D    +P +SP G
Sbjct: 435 VTPADFDAINPSISPTGTLVFEHRQLITELIEQPLATGGGAHTPLPSDKTDSSPVYSPDG 494

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            S+ F   + G     LY    +   + T  +       P W  
Sbjct: 495 HSVAFVSTRSGWGEVWLYRTGSDAPVQLTHFHGEGLVFPPSWSP 538



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 94/252 (37%), Gaps = 19/252 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSM 259
            N             +  +SP+ + +A A      D   +Y+ D   D +P R+      
Sbjct: 191 FNALSPVDLFTGNTTDSAWSPDGRWLAVAMIPHGEDQSHIYIQDVHGDASPVRLTEGSLA 250

Query: 260 ILAPRFSSNGKRALISVQKDEA-MDIYSVDLQSNAT----ERLTNTLFINISAS--YSPD 312
              P +S +G+    + + D +  ++   +L +       + ++     +   +  +S D
Sbjct: 251 ETRPVWSPDGREIAFTRRVDMSHFEVVRFNLAAKTLNTVGKFVSYWPIGDDHPALDWSSD 310

Query: 313 SSQIVFESDR-EGKE-QLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSG 368
              ++       G   ++ ++     ++  ++     S  D    +SP G  IAF    G
Sbjct: 311 GRFLLTTEQPVAGNPMRIVLISVATGERTSVTSPPIGSSGDIDAKFSPDGSWIAF--RRG 368

Query: 369 EKFAIGVMKKDGSQE----RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               + ++   G Q     RL  +   ++   W   GRS+++  +++  T   L+ I  +
Sbjct: 369 GLGDLYMVSVKGEQVKPATRLTFDTDGVRGLAWIDHGRSILYGTQRNETTPYGLWRITRD 428

Query: 425 GRNETLINTPAY 436
           G     + TPA 
Sbjct: 429 GGTPQPV-TPAD 439


>gi|293370700|ref|ZP_06617250.1| WD40-like protein [Bacteroides ovatus SD CMC 3f]
 gi|292634224|gb|EFF52763.1| WD40-like protein [Bacteroides ovatus SD CMC 3f]
          Length = 1096

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 83/236 (35%), Gaps = 34/236 (14%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            + + R SP+  ++ +      DI +V            ++    S    P +S +GK+ 
Sbjct: 24  WMRDARISPDGSEIVFCY--KGDIYKVPAQ----GGTAVQLTTQTSYEANPVWSPDGKQI 77

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGK---- 325
             +  ++   D++ +     A  RLT      I ++++PD   I F +   D  G     
Sbjct: 78  AFASDRNGNFDLFIMPADGGAARRLTYHSASEIPSAFTPDGKYIFFSASIQDPVGSALFP 137

Query: 326 ----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGE 369
                +LY +   G   +++     A       +  G    +               S  
Sbjct: 138 TGAMTELYKVPVAGGRTEQVL-GTPAELVCFDKT--GKNFLYQDRKGFEDEWRKHHTSSI 194

Query: 370 KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              I +      +   L   +   + P ++P G ++ F  ++DG +   +Y+  LN
Sbjct: 195 TRDIWLYNTQTGKHTNLTNREGEDRNPVYAPDGNAVYFLSERDGGS-FNVYTFPLN 249



 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 79/221 (35%), Gaps = 34/221 (15%)

Query: 252 RIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +    S  + P +      S +G   +   + D    IY V  Q     +LT       
Sbjct: 11  VLSALSSYAITPLWMRDARISPDGSEIVFCYKGD----IYKVPAQGGTAVQLTTQTSYEA 66

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  +SPD  QI F SDR G   L++M ++G   +R++    AS     ++P G  I F+ 
Sbjct: 67  NPVWSPDGKQIAFASDRNGNFDLFIMPADGGAARRLTY-HSASEIPSAFTPDGKYIFFSA 125

Query: 366 F-----------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--- 411
                       +G    +  +   G +   ++     +   +  +G++ ++  +K    
Sbjct: 126 SIQDPVGSALFPTGAMTELYKVPVAGGRTEQVLGTP-AELVCFDKTGKNFLYQDRKGFED 184

Query: 412 -------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                        ++  +   G++  L N      +P +  
Sbjct: 185 EWRKHHTSSITRDIWLYNTQTGKHTNLTNREGEDRNPVYAP 225



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 99/310 (31%), Gaps = 81/310 (26%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM------- 259
             +R+     P ++P+   V + +  D     VY       +  K +  F++        
Sbjct: 211 LTNREGEDRNPVYAPDGNAVYFLSERDGGSFNVYTFPLNTPQEVKAVTTFKTHPVRFLSV 270

Query: 260 ----------------------------------------------ILAPRFSSNGKRAL 273
                                                           +   S +GK+  
Sbjct: 271 SDKGTLCYTYDGELYTQKSGARPEKVKVELVRDDEQQLATLKFSQGATSASVSPDGKQVA 330

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM-- 331
             V+ D    ++        T+++TNT     + S++PD+  +V+ S+R G  QLY    
Sbjct: 331 FIVRGD----VFVTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASERTGNWQLYTAKI 386

Query: 332 ---------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                     +   +++ +   K      P +SP G  +AF +       + V+     +
Sbjct: 387 SRKEDPNFPNATLIEEEVLLPSKTVERAYPQYSPDGKELAFIEDRN---RLMVLNLKTKK 443

Query: 383 ERLLVEDSNLQ------APTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            R + + S            WSP G+   L F   +  D  S +  +   G   T +   
Sbjct: 444 VRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRH-DPYSDVGIVSAQGGAITNLTNS 502

Query: 435 AYAS-DPQWV 443
            Y S  P+WV
Sbjct: 503 GYISGAPRWV 512



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 76/215 (35%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++VA+    D        + +      K+I N  +   A  F+ + +  + + +
Sbjct: 321 SVSPDGKQVAFIVRGD------VFVTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS------------ASYSPDSSQIVFESDREGK 325
           +     +Y+  +         N   I                 YSPD  ++ F  DR   
Sbjct: 375 RTGNWQLYTAKISRKEDPNFPNATLIEEEVLLPSKTVERAYPQYSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  +G++  
Sbjct: 432 NRLMVLNLKTKKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDVGIVSA 491

Query: 379 DGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G     L     +  AP W   G +++F  ++ G
Sbjct: 492 QGGAITNLTNSGYISGAPRWVLDGNAILFQTERYG 526



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 81/234 (34%), Gaps = 32/234 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +       
Sbjct: 41  YKGDIYKVPAQGGTAVQLTTQTS-YEANPVWSPDGKQIAFASDRNGNFDLFIM--PADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERL 297
           A +R+    +  +   F+ +GK    S                  ++Y V +    TE++
Sbjct: 98  AARRLTYHSASEIPSAFTPDGKYIFFSASIQDPVGSALFPTGAMTELYKVPVAGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  +       ++ +
Sbjct: 158 LGTPAELV--CFDKTGKNFLYQ-DRKGFEDEWRKHHTSSITRDIWLYNTQTGKHTNLT-N 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +E    +PV++P G+ + F ++  G  F +     +  QE   V         +
Sbjct: 214 REGEDRNPVYAPDGNAVYFLSERDGGSFNVYTFPLNTPQEVKAVTTFKTHPVRF 267



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 85/220 (38%), Gaps = 22/220 (10%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK     V   ++ V        K+  ++PA    ++    +      +   G+
Sbjct: 320 ASVSPDGKQVAFIVRGDVF-VTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASERTGN 378

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +      +S          +L            L PS+      P++SP+ +++A+    
Sbjct: 379 WQLYTAKISRKEDPNFPNATLI-------EEEVLLPSKTVERAYPQYSPDGKELAFI--- 428

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRA---LISVQKDEAMDI 284
            ED  R+ +++ +  +  +++ +              +S +GK      I  + D   D+
Sbjct: 429 -EDRNRLMVLNLKT-KKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDV 486

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
             V  Q  A   LTN+ +I+ +  +  D + I+F+++R G
Sbjct: 487 GIVSAQGGAITNLTNSGYISGAPRWVLDGNAILFQTERYG 526


>gi|256841892|ref|ZP_05547398.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256736786|gb|EEU50114.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 1076

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 71/204 (34%), Gaps = 30/204 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G+    S Q D    IY+V        +LT     +    +SPD  +I F S+R 
Sbjct: 30  AISPDGQTIAFSYQGD----IYTVPSSGGKARQLTTHPAHDTRPVWSPDGQKIAFASNRS 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF-A 372
           G   +++M   G + KR++     + +   +   G  I +           +F G +F  
Sbjct: 86  GNFDVFLMNKEGGEPKRLTT-HSTNEYPTTFKDNG-HILYLANILQDAKDIQFPGTRFMQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSID 422
           +  +  DG +   L     ++    S  G  L+++  K                 ++   
Sbjct: 144 VYEISTDGGRPD-LYSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSITRDIWLCT 202

Query: 423 L--NGRNETLINTPAYASDPQWVG 444
           L  +   + +        +P W  
Sbjct: 203 LGKDRSFQKVTTFGGEDRNPVWAA 226



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 80/242 (33%), Gaps = 39/242 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ Q +A++     DI  V           +++    +    P +S +G++   +  
Sbjct: 30  AISPDGQTIAFSY--QGDIYTV----PSSGGKARQLTTHPAHDTRPVWSPDGQKIAFASN 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------------FESDREGK 325
           +    D++ ++ +    +RLT         ++  +   +             F   R   
Sbjct: 84  RSGNFDVFLMNKEGGEPKRLTTHSTNEYPTTFKDNGHILYLANILQDAKDIQFPGTR--F 141

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAI 373
            Q+Y + ++G    R          +   S  G  + +               S     I
Sbjct: 142 MQVYEISTDGG---RPDLYSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSITRDI 198

Query: 374 GVMKK--DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +     D S +++       + P W+  G S  +  ++ G     ++  DL G +E  I
Sbjct: 199 WLCTLGKDRSFQKVTTFGGEDRNPVWAADGASFYYLSEEKGSF--NIFKKDLAGNSEKQI 256

Query: 432 NT 433
            T
Sbjct: 257 TT 258



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 56/305 (18%), Positives = 115/305 (37%), Gaps = 46/305 (15%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ EKG FN     + +  ++G  +  +         +R+LT      L    +S +
Sbjct: 231 FYYLSEEKGSFN-----IFKKDLAGNSEKQITT--HTTHPVRFLTSDNSGTLC---YSYD 280

Query: 223 QQKVAYATYDDEDILRVYLM----DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            +   Y   + +   +V +         D   + + +  + I     S NGK      + 
Sbjct: 281 GE--IYTVKEGQKPAKVNIQIVADKIENDVIHRLLTDGATDI---AVSPNGKEVAFITRG 335

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D    +Y   ++   T ++TNT     +  +SPD   +V+ ++R G   +Y  +    + 
Sbjct: 336 D----VYVTSIEYETTRQITNTPQQERNIDFSPDGRSLVYSAERGGTWGIYESKLTRDED 391

Query: 339 KRISQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           K+ +   E           + F P++SP G+ +AF +       + V+ +   Q R +++
Sbjct: 392 KQFTYAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLENRTT---LRVINRKTKQVRTVLD 448

Query: 389 DSNLQAPT-------WSPSGRSLIFSRKKDGDTGS---KLYSIDLNGRNETLINTPAYAS 438
              L + +       WSP  +  +      G   +    L   D +G    L  +     
Sbjct: 449 GKYLYSYSDGDQHFQWSPDSKWFLVDYISVGGWNNTDIALVKADGSGEVTNLTESGYSDG 508

Query: 439 DPQWV 443
           D +WV
Sbjct: 509 DAKWV 513



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 84/237 (35%), Gaps = 37/237 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN ++VA+ T  D     VY+         ++I N         FS +G+  + S +
Sbjct: 321 AVSPNGKEVAFITRGD-----VYVTSIEY-ETTRQITNTPQQERNIDFSPDGRSLVYSAE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTL---------FINIS--ASYSPDSSQIVFESDREGKE 326
           +     IY   L  +  ++ T                S    YSPD +++ F  +R    
Sbjct: 375 RGGTWGIYESKLTRDEDKQFTYAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLENRT--- 431

Query: 327 QLYVMQSNGSDQKRISQDKE-ASYFDPV----WSPQGDL--IAFTKFSG-EKFAIGVMKK 378
            L V+       + +   K   SY D      WSP      + +    G     I ++K 
Sbjct: 432 TLRVINRKTKQVRTVLDGKYLYSYSDGDQHFQWSPDSKWFLVDYISVGGWNNTDIALVKA 491

Query: 379 DGSQE-RLLVEDSNLQAPT-WSPSGRSLIFSRKKDG-------DTGSKLYSIDLNGR 426
           DGS E   L E         W   G+++I+S  + G            +Y +  +G 
Sbjct: 492 DGSGEVTNLTESGYSDGDAKWVLDGKAIIWSSDRAGFRSHGSWGAERDVYIMFFDGE 548



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 88/257 (34%), Gaps = 42/257 (16%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILR------- 238
           G     +  +  DG             +     S +  K+ Y  Y   ED  R       
Sbjct: 138 GTRFMQVYEISTDGGRPDL---YSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSI 194

Query: 239 ---VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              ++L     DR+ +++  F      P ++++G       ++  + +I+  DL  N+ +
Sbjct: 195 TRDIWLCTLGKDRSFQKVTTFGGEDRNPVWAADGASFYYLSEEKGSFNIFKKDLAGNSEK 254

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK---------------- 339
           ++T      +    S +S  + +  D     ++Y ++      K                
Sbjct: 255 QITTHTTHPVRFLTSDNSGTLCYSYD----GEIYTVKEGQKPAKVNIQIVADKIENDVIH 310

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWS 398
           R+  D      D   SP G  +AF         + V   +    R +      +    +S
Sbjct: 311 RLLTDG---ATDIAVSPNGKEVAFITRGD----VYVTSIEYETTRQITNTPQQERNIDFS 363

Query: 399 PSGRSLIFSRKKDGDTG 415
           P GRSL++S ++ G  G
Sbjct: 364 PDGRSLVYSAERGGTWG 380



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 7/83 (8%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKK 410
              SP G  IAF+        I  +   G + R L    ++   P WSP G+ + F+  +
Sbjct: 29  CAISPDGQTIAFSYQGD----IYTVPSSGGKARQLTTHPAHDTRPVWSPDGQKIAFASNR 84

Query: 411 DGDTGSKLYSIDLNGRNETLINT 433
            G+    ++ ++  G     + T
Sbjct: 85  SGNF--DVFLMNKEGGEPKRLTT 105



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 94/261 (36%), Gaps = 42/261 (16%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  +  +   G   R LT         P +SP+ QK+A+A+    +   V+LM+ +  
Sbjct: 41  SYQGDIYTVPSSGGKARQLTTHPAH-DTRPVWSPDGQKIAFASNRSGN-FDVFLMN-KEG 97

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI----------YSVDLQSNATERL 297
             PKR+    +      F  NG    ++    +A DI          Y +       +  
Sbjct: 98  GEPKRLTTHSTNEYPTTFKDNGHILYLANILQDAKDIQFPGTRFMQVYEISTDGGRPDLY 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLY---------------VMQSNGSDQKRIS 342
           ++    NI  + S D S++++  D +G E  +                +  + S QK  +
Sbjct: 158 SSLYMENI--ALSKDGSKLLYN-DYKGYEDPWRKHHQSSITRDIWLCTLGKDRSFQKVTT 214

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPS 400
              E    +PVW+  G    +       F I      G+ E+ +   +      +  S +
Sbjct: 215 FGGE--DRNPVWAADGASFYYLSEEKGSFNIFKKDLAGNSEKQITTHTTHPV-RFLTSDN 271

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
             +L +S         ++Y++
Sbjct: 272 SGTLCYSYD------GEIYTV 286



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 16/154 (10%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             Q  F+P +SP+  +VA+        ++       R     K + ++       ++S +
Sbjct: 408 SGQTSFQPLYSPDGNEVAFLENRTTLRVINRKTKQVRTVLDGKYLYSYSDGDQHFQWSPD 467

Query: 269 GKRALI---SVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG 324
            K  L+   SV      DI  V          LT + + +  A +  D   I++ SDR G
Sbjct: 468 SKWFLVDYISVGGWNNTDIALVKADGSGEVTNLTESGYSDGDAKWVLDGKAIIWSSDRAG 527

Query: 325 ---------KEQLYVMQSNGS--DQKRISQDKEA 347
                    +  +Y+M  +G   D+ R+S++++A
Sbjct: 528 FRSHGSWGAERDVYIMFFDGEAYDKFRLSKEEQA 561


>gi|37523925|ref|NP_927302.1| WD repeat-containing protein [Gloeobacter violaceus PCC 7421]
 gi|35214931|dbj|BAC92297.1| WD-repeat protein [Gloeobacter violaceus PCC 7421]
          Length = 1188

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 119/362 (32%), Gaps = 54/362 (14%)

Query: 75   RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVT-----GRV---------IKEG 120
             +     IS     + + +       + W++   + L T     G+V             
Sbjct: 778  HTGRIRAISFSPDGEWLASSSLDCTVKLWDAATGECLRTFTGHSGQVWSVSFAPDGQTLA 837

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
               L    R+WD    + +   +     A W          I+       G         
Sbjct: 838  SGSLDQTVRIWDAATGQCL---RTLQGNAGW----------IWSVAFAPDG--------- 875

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             +++ SG +  ++ + D                ++   FSP+ + +A  ++D      + 
Sbjct: 876  -QTLASGSLDRTVRIWDVPSGRCVRTLTGHGSWVWSVAFSPDGRTLASGSFDQ----TIK 930

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            L D    +  + +    + + +  FS +G+    S   D+ + ++ V         LT  
Sbjct: 931  LWDAATGQCLRTLSGHNNWVRSVAFSPDGRTLA-SGSHDQTVKLWEVS-SGQCLRTLTGH 988

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD   +   S     + + V  +   +     +   +  +   +SP G +
Sbjct: 989  SSWVWSVAFSPDGRTVASGSF---DQTVRVWNAATGECLHTLKVDSSQVWSVAFSPDGRI 1045

Query: 361  IAFTKFSGEKFAIGVMKKDGSQ-ERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A        +A+ +      +  R L    S + +  +SP  R+++ S     D   +L
Sbjct: 1046 LA---GGSGNYAVWLWDTATGECLRTLTGHTSQVWSVAFSPDSRTVVSSSH---DQTVRL 1099

Query: 419  YS 420
            + 
Sbjct: 1100 WD 1101



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 99/284 (34%), Gaps = 24/284 (8%)

Query: 164  QSITGEKG-DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            ++ TG  G  ++       +++ SG +  ++ + D                ++   F+P+
Sbjct: 815  RTFTGHSGQVWSVSFAPDGQTLASGSLDQTVRIWDAATGQCLRTLQGNAGWIWSVAFAPD 874

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             Q +A  + D      V + D    R  + +    S + +  FS +G+    S   D+ +
Sbjct: 875  GQTLASGSLDR----TVRIWDVPSGRCVRTLTGHGSWVWSVAFSPDGRTLA-SGSFDQTI 929

Query: 283  DIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             ++  D  +      L+       S ++SPD   +   S     + + + + +     R 
Sbjct: 930  KLW--DAATGQCLRTLSGHNNWVRSVAFSPDGRTLASGSH---DQTVKLWEVSSGQCLRT 984

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSP 399
                 +  +   +SP G  +A   F      + V      +    L V+ S + +  +SP
Sbjct: 985  LTGHSSWVWSVAFSPDGRTVASGSFDQT---VRVWNAATGECLHTLKVDSSQVWSVAFSP 1041

Query: 400  SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             GR L       G     ++  D     E L     + S   W 
Sbjct: 1042 DGRILA-----GGSGNYAVWLWD-TATGECLRTLTGHTSQ-VWS 1078



 Score = 93.5 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 51/319 (15%), Positives = 95/319 (29%), Gaps = 44/319 (13%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           LWDV+  +++                HT  D +        G              SG  
Sbjct: 721 LWDVRTGERLGTLT-----------GHT--DQVLSVAFSPDGGVL----------ASGSH 757

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             +L + +                +    FSP+ + +A ++ D      V L D      
Sbjct: 758 DQTLKLWEVTTGTCLTTLTGHTGRIRAISFSPDGEWLASSSLD----CTVKLWDAATGEC 813

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISAS 308
            +        + +  F+ +G+    S   D+ + I+  D  +      L        S +
Sbjct: 814 LRTFTGHSGQVWSVSFAPDGQTLA-SGSLDQTVRIW--DAATGQCLRTLQGNAGWIWSVA 870

Query: 309 YSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++PD   +   S DR     + +         R      +  +   +SP G  +A   F 
Sbjct: 871 FAPDGQTLASGSLDRT----VRIWDVPSGRCVRTLTGHGSWVWSVAFSPDGRTLASGSFD 926

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                I +      Q    +   N    +  +SP GR+L        D   KL+ +    
Sbjct: 927 QT---IKLWDAATGQCLRTLSGHNNWVRSVAFSPDGRTLASGSH---DQTVKLWEVSSGQ 980

Query: 426 RNETLINTPAYASDPQWVG 444
              TL    ++     +  
Sbjct: 981 CLRTLTGHSSWVWSVAFSP 999



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 74/226 (32%), Gaps = 15/226 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                +  L  + RDG   +         +    FSP+   +A  + D      + L DT
Sbjct: 586 GDDSGEVRLWRV-RDGQ-QQLSFRGHTDWISALAFSPDGSVLASGSEDQ----TIKLWDT 639

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FI 303
              +  + +      + +  FS +G     S   +E + ++  D       R   +    
Sbjct: 640 ATGQCLRTLTGHGGWVYSVAFSPDGTLIASSSPSNETVRLW--DAAGGQCTRTFKSRTGR 697

Query: 304 NISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             S ++SPD   +   S DR     + +      ++               +SP G ++A
Sbjct: 698 MWSVAFSPDGHTLAAASLDRT----VKLWDVRTGERLGTLTGHTDQVLSVAFSPDGGVLA 753

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            +    +   +  +        L      ++A ++SP G  L  S 
Sbjct: 754 -SGSHDQTLKLWEVTTGTCLTTLTGHTGRIRAISFSPDGEWLASSS 798



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/295 (15%), Positives = 94/295 (31%), Gaps = 40/295 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G ++  G D   V  RLW V+D +Q                 HT  D I        G  
Sbjct: 580 GELLAIGDDSGEV--RLWRVRDGQQ-----------QLSFRGHT--DWISALAFSPDG-- 622

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     + SG    ++ + D                ++   FSP+   +A ++   
Sbjct: 623 --------SVLASGSEDQTIKLWDTATGQCLRTLTGHGGWVYSVAFSPDGTLIASSS--- 671

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                V L D    +  +   +    + +  FS +G     +   D  + ++  D+++  
Sbjct: 672 PSNETVRLWDAAGGQCTRTFKSRTGRMWSVAFSPDGHTLA-AASLDRTVKLW--DVRTGE 728

Query: 294 -TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               LT      +S ++SPD   +   S     + L + +                    
Sbjct: 729 RLGTLTGHTDQVLSVAFSPDGGVLASGSH---DQTLKLWEVTTGTCLTTLTGHTGRIRAI 785

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLV-EDSNLQAPTWSPSGRSLI 405
            +SP G+ +A +        + +      +  R        + + +++P G++L 
Sbjct: 786 SFSPDGEWLASSSLDCT---VKLWDAATGECLRTFTGHSGQVWSVSFAPDGQTLA 837



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 76/249 (30%), Gaps = 34/249 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA-----HTISDDIYQSIT---- 167
                        +LWD    + +  +         R +A      T++   +        
Sbjct: 918  RTLASGSFDQTIKLWDAATGQCL--RTLSGHNNWVRSVAFSPDGRTLASGSHDQTVKLWE 975

Query: 168  ------------GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
                             ++        +V SG    ++ V +       +        ++
Sbjct: 976  VSSGQCLRTLTGHSSWVWSVAFSPDGRTVASGSFDQTVRVWNAATGECLHTLKVDSSQVW 1035

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               FSP+ + +A           V+L DT      + +    S + +  FS +  R ++S
Sbjct: 1036 SVAFSPDGRILA----GGSGNYAVWLWDTATGECLRTLTGHTSQVWSVAFSPD-SRTVVS 1090

Query: 276  VQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               D+ + ++  D  +      LT       S ++SPD   ++  S     E + +  S+
Sbjct: 1091 SSHDQTVRLW--DAATGECLRTLTGHTSQVWSVAFSPDGRTVISGSQ---DETIRLWDSH 1145

Query: 335  GSDQKRISQ 343
                  + +
Sbjct: 1146 TGKPLELLR 1154


>gi|326800508|ref|YP_004318327.1| hypothetical protein Sph21_3114 [Sphingobacterium sp. 21]
 gi|326551272|gb|ADZ79657.1| WD40-like beta Propeller containing protein [Sphingobacterium sp.
           21]
          Length = 1043

 Score =  115 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 91/241 (37%), Gaps = 29/241 (12%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNA 293
             L +        +      N  +M ++P  S +GK      +KD  ++D++  D  +  
Sbjct: 277 KPLLIDTAQVPRGQMIINNKNGGNMNVSPTISPDGKYVAFLSEKDLFSIDLFLADAGTGK 336

Query: 294 TER----------LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRIS 342
             R          +    +I  + S+S DS +  F    +G+ +L ++   NG      S
Sbjct: 337 IIRKLSSRQNNSHIDEFSYIESAGSFSHDSKKFAFSVFSQGRTKLLIVDVENGKTLATES 396

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSG 401
                 + +  WSP G+L+AF+        I +          L  D  +   P++S  G
Sbjct: 397 MGDIGEFANITWSPDGNLVAFSGLKNGYSDIYLYDLSSKSLTQLTNDWYSDYHPSFSRDG 456

Query: 402 RSLIFSRKK--------DGDTGSKLYSIDLNGRNETLIN--------TPAYASDPQWVGF 445
           + ++FS  +          D    L  ID++ +    I+         P +++D + + F
Sbjct: 457 KKIVFSTDRLSLESGYEGVDIPLGLAIIDISTKEIRKIDIFPGANNLNPQFSADDKQLYF 516

Query: 446 M 446
           +
Sbjct: 517 L 517



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 93/248 (37%), Gaps = 27/248 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---------FRSM 259
           +   +   P  SP+ + VA+ +  D   + ++L D    +  +++ +         F  +
Sbjct: 297 NGGNMNVSPTISPDGKYVAFLSEKDLFSIDLFLADAGTGKIIRKLSSRQNNSHIDEFSYI 356

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQI 316
             A  FS + K+   SV       +  VD+++      T ++         ++SPD + +
Sbjct: 357 ESAGSFSHDSKKFAFSVFSQGRTKLLIVDVENGK-TLATESMGDIGEFANITWSPDGNLV 415

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--------- 367
            F   + G   +Y+   +     +++ D   S + P +S  G  I F+            
Sbjct: 416 AFSGLKNGYSDIYLYDLSSKSLTQLTND-WYSDYHPSFSRDGKKIVFSTDRLSLESGYEG 474

Query: 368 -GEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + ++     + R   +   +N   P +S   + L F   +DG      Y+   +
Sbjct: 475 VDIPLGLAIIDISTKEIRKIDIFPGANNLNPQFSADDKQLYFLSNRDGFRNLYRYTFS-S 533

Query: 425 GRNETLIN 432
           G+ E L +
Sbjct: 534 GKTEQLTD 541



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 83/233 (35%), Gaps = 27/233 (11%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSR---------DQILFEPRFSPNQQKVAYA 229
           +V+      +    L + D     I     SR           I     FS + +K A++
Sbjct: 313 YVAFLSEKDLFSIDLFLADAGTGKIIRKLSSRQNNSHIDEFSYIESAGSFSHDSKKFAFS 372

Query: 230 TYDDED----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +        I+ V    T    +   IG F ++     +S +G     S  K+   DIY
Sbjct: 373 VFSQGRTKLLIVDVENGKTLATESMGDIGEFANIT----WSPDGNLVAFSGLKNGYSDIY 428

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----EGKE------QLYVMQSNG 335
             DL S +  +LTN  + +   S+S D  +IVF +DR     G E       L ++  + 
Sbjct: 429 LYDLSSKSLTQLTNDWYSDYHPSFSRDGKKIVFSTDRLSLESGYEGVDIPLGLAIIDIST 488

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            + ++I     A+  +P +S     + F         +        +   L +
Sbjct: 489 KEIRKIDIFPGANNLNPQFSADDKQLYFLSNRDGFRNLYRYTFSSGKTEQLTD 541



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 83/220 (37%), Gaps = 18/220 (8%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F+      + SV S      L V   +G  +   +           +SP+   VA++ 
Sbjct: 360 GSFSHDSKKFAFSVFSQGRTKLLIVDVENGKTLATESMGDIGEFANITWSPDGNLVAFSG 419

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------DE 280
             +     +YL D    ++  ++ N       P FS +GK+ + S  +          D 
Sbjct: 420 LKNG-YSDIYLYDL-SSKSLTQLTNDWYSDYHPSFSRDGKKIVFSTDRLSLESGYEGVDI 477

Query: 281 AMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + +  +D+ +    ++       N++  +S D  Q+ F S+R+G   LY    +    +
Sbjct: 478 PLGLAIIDISTKEIRKIDIFPGANNLNPQFSADDKQLYFLSNRDGFRNLYRYTFSSGKTE 537

Query: 340 RISQDKEASYFDPVWSP-----QGDLIAFTKFSGEKFAIG 374
           +++           +SP       D I ++ +  +K+ I 
Sbjct: 538 QLTDYFTGISGITEYSPALSVSANDDILYSYYRSQKYTIY 577


>gi|116620509|ref|YP_822665.1| peptidase S41 [Candidatus Solibacter usitatus Ellin6076]
 gi|116223671|gb|ABJ82380.1| peptidase S41 [Candidatus Solibacter usitatus Ellin6076]
          Length = 1121

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 90/245 (36%), Gaps = 39/245 (15%)

Query: 228 YATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +Y +  +   YL D  I        +R+ + ++  + PRFS +G     S  ++   D
Sbjct: 27  HPSYANGKVAFSYLGDLWIANENGSGAQRLTDNQARDVYPRFSPDGNWIAFSSNREGNYD 86

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-----EQLYVMQSNGSDQ 338
           +Y V        +LT     +   ++SPD  +I+F S R          L+ + + G  +
Sbjct: 87  VYVVAATGGKPRQLTFHSADDNVVNWSPDGKKILFTSARGNGVFPSVMTLWEIPAEGGIE 146

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTK----------FSGEKFAIGVMKKDGSQERLLVE 388
           + +  D  A      +SP G  +AFT+                 + VM+    +   L  
Sbjct: 147 RPVPTDWGA---WASYSPDGSKLAFTRHPATWSRKHYRGSYAADLWVMELASKKFTRLGN 203

Query: 389 D---SNLQAPTWSPSGRSLIFSRKKDGD-------------TGSKLYSIDLNGRNETLIN 432
           +    N   P ++ +G  + F   +  +             + + ++ I   G  ET + 
Sbjct: 204 EDYKGNRLWPMYAKNGE-IYFVSNQTENEKNIQFGGPAVMKSVNNIWKISEKGGKETQVT 262

Query: 433 TPAYA 437
             A  
Sbjct: 263 HHADG 267



 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 111/283 (39%), Gaps = 47/283 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L + + +G+  + LT ++ + ++ PRFSP+   +A+++  + +   VY++       P+
Sbjct: 42  DLWIANENGSGAQRLTDNQARDVY-PRFSPDGNWIAFSSNREGN-YDVYVVA-ATGGKPR 98

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEA-----MDIYSVDLQSNATERLTNTLFINIS 306
           ++    +      +S +GK+ L +  +        M ++ +  +      +         
Sbjct: 99  QLTFHSADDNVVNWSPDGKKILFTSARGNGVFPSVMTLWEIPAEGGIERPVPTDWG--AW 156

Query: 307 ASYSPDSSQIVFESDREGKEQ----------LYVMQSNGSDQKRISQDKE-ASYFDPVWS 355
           ASYSPD S++ F        +          L+VM+       R+  +    +   P+++
Sbjct: 157 ASYSPDGSKLAFTRHPATWSRKHYRGSYAADLWVMELASKKFTRLGNEDYKGNRLWPMYA 216

Query: 356 PQGDLIAFTKFSGEK---------------FAIGVMKKDGSQERLLVE--DSNLQAPTWS 398
             G+ I F     E                  I  + + G +E  +    D NL  P+ S
Sbjct: 217 KNGE-IYFVSNQTENEKNIQFGGPAVMKSVNNIWKISEKGGKETQVTHHADGNLFFPSIS 275

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRN--ETLINTPAYASD 439
             G+++++      +    ++ +D       E +I+  A + +
Sbjct: 276 ADGKTIVY------EDNFGIWKLDTASGKSSEIVIDIKADSKE 312



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 109/271 (40%), Gaps = 31/271 (11%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N++  +   G     +T   D  LF P  S + + + Y     ED   ++ +DT   ++ 
Sbjct: 246 NNIWKISEKGGKETQVTHHADGNLFFPSISADGKTIVY-----EDNFGIWKLDTASGKSS 300

Query: 251 KRIGNFR-------------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           + + + +             +   A   S + KRA I        +I+++       +R+
Sbjct: 301 EIVIDIKADSKENDRELVTLTDAQAFSLSPSNKRAAIVA----HGEIFTIATDRGEPQRV 356

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           + + +      +SP+   I F SDR G+E++Y+    G + K++S D +      VW   
Sbjct: 357 SESAWKEQEPRWSPNGKWIAFVSDRTGREEIYLSDELGKNAKKLS-DVDCDKNSLVWGAD 415

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTG 415
              + ++   G    + ++  +  +  +L +    N+    +SP G+ L ++R +D    
Sbjct: 416 SKALLWS---GSDHKLRLVDVESGKTDILAQGEAGNITGAQFSPDGKYLSYAR-QDKLLR 471

Query: 416 SKLYSIDLNGRNETLINTPAYASD--PQWVG 444
             ++  +L    E +I    +      +W  
Sbjct: 472 PHVWVKELATGQERMIGGEDFLQSNGAKWTP 502



 Score = 97.4 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/350 (13%), Positives = 116/350 (33%), Gaps = 74/350 (21%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           +  +++    + D+Y   + +       I F S    +      + V+   G   R LT 
Sbjct: 51  SGAQRLTDNQARDVYPRFSPDGNW----IAFSSNREGN----YDVYVVAATGGKPRQLTF 102

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI---DRAPKRIGNFRSMILAPRF 265
                     +SP+ +K+ + +     +    +    I       + +        +  +
Sbjct: 103 HSADDNVV-NWSPDGKKILFTSARGNGVFPSVMTLWEIPAEGGIERPVPTDWGAWAS--Y 159

Query: 266 SSNGKRALIS----------VQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDS 313
           S +G +   +           +   A D++ ++L S    RL N       +   Y+ + 
Sbjct: 160 SPDGSKLAFTRHPATWSRKHYRGSYAADLWVMELASKKFTRLGNEDYKGNRLWPMYAKNG 219

Query: 314 SQIVFESDREGK---------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +I F S++                    ++ +   G  + +++   + + F P  S  G
Sbjct: 220 -EIYFVSNQTENEKNIQFGGPAVMKSVNNIWKISEKGGKETQVTHHADGNLFFPSISADG 278

Query: 359 DLIAFTKFSGEKFAIGVMKKDGS---------------QERLLVEDSNLQAPTWSPSGRS 403
             I +     + F I  +                     +R LV  ++ QA + SPS + 
Sbjct: 279 KTIVY----EDNFGIWKLDTASGKSSEIVIDIKADSKENDRELVTLTDAQAFSLSPSNKR 334

Query: 404 LIFSRKKDGDTGSKLYSIDLN-GRNETLINT------PAYASDPQWVGFM 446
                        ++++I  + G  + +  +      P ++ + +W+ F+
Sbjct: 335 AAIVAH------GEIFTIATDRGEPQRVSESAWKEQEPRWSPNGKWIAFV 378



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 90/280 (32%), Gaps = 63/280 (22%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L ++D +      L       +   +FSP+ + ++YA  D      V++ +    +    
Sbjct: 428 LRLVDVESGKTDILAQGEAGNITGAQFSPDGKYLSYARQDKLLRPHVWVKELATGQERMI 487

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSP 311
            G         +++ +GK+ L+       +   ++   +    +L     + +  +  SP
Sbjct: 488 GGEDFLQSNGAKWTPDGKKLLLI----GGVGAPAMAALNRTVTQL---YAVALLPADKSP 540

Query: 312 DSSQIVFESDREGK--------------------EQLYVMQSNGSDQKRISQDK--EASY 349
           DS +I   S+ +                        + ++       +RI+Q      S 
Sbjct: 541 DSGEI--NSEEQAMAAANDPAAGRSGRGGGTAPAPAVKIVW--DGIDRRITQLTHMPGSV 596

Query: 350 FDPVWSPQGDLIAFTKF-------SGEKFAIGVMKKDGSQERLLVEDS------------ 390
              V +P      F+         +     +  + +DG++   L   +            
Sbjct: 597 MFVVPAPDSRTYLFSAQGAAADDPAAGGPGMYTIAEDGTRVTKLNTTAADAGAAGRGRGG 656

Query: 391 ----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                   P WS   RS+ + +      G  LYS+ + G 
Sbjct: 657 RGGGGFNEPQWSRDNRSIYYLQ------GGGLYSLAVGGT 690


>gi|301311124|ref|ZP_07217053.1| MdsD protein [Bacteroides sp. 20_3]
 gi|300831187|gb|EFK61828.1| MdsD protein [Bacteroides sp. 20_3]
          Length = 1076

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 71/204 (34%), Gaps = 30/204 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G+    S Q D    IY+V        +LT     +    +SPD  +I F S+R 
Sbjct: 30  AISPDGQTIAFSYQGD----IYTVPSSGGKARQLTTHPAHDTRPVWSPDGQRIAFASNRS 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF-A 372
           G   +++M   G + KR++     + +   +   G  I +           +F G +F  
Sbjct: 86  GNFDVFLMNKEGGEPKRLTT-HSTNEYPTTFKDNG-HILYLANVLQDAKDIQFPGTRFMQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSID 422
           +  +  DG +   L     ++    S  G  L+++  K                 ++   
Sbjct: 144 VYEISTDGGRPD-LYSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSITRDIWLCT 202

Query: 423 L--NGRNETLINTPAYASDPQWVG 444
           L  +   + +        +P W  
Sbjct: 203 LGKDRSFQKVTTFGGEDRNPVWAA 226



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 80/242 (33%), Gaps = 39/242 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ Q +A++     DI  V           +++    +    P +S +G+R   +  
Sbjct: 30  AISPDGQTIAFSY--QGDIYTV----PSSGGKARQLTTHPAHDTRPVWSPDGQRIAFASN 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------------FESDREGK 325
           +    D++ ++ +    +RLT         ++  +   +             F   R   
Sbjct: 84  RSGNFDVFLMNKEGGEPKRLTTHSTNEYPTTFKDNGHILYLANVLQDAKDIQFPGTR--F 141

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAI 373
            Q+Y + ++G    R          +   S  G  + +               S     I
Sbjct: 142 MQVYEISTDGG---RPDLYSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSITRDI 198

Query: 374 GVMKK--DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +     D S +++       + P W+  G S  +  ++ G     ++  DL G +E  I
Sbjct: 199 WLCTLGKDRSFQKVTTFGGEDRNPVWAADGASFYYLSEEKGSF--NIFKKDLAGNSEKQI 256

Query: 432 NT 433
            T
Sbjct: 257 TT 258



 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 57/305 (18%), Positives = 116/305 (38%), Gaps = 46/305 (15%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ EKG FN     + +  ++G  +  +         +R+LT      L    +S +
Sbjct: 231 FYYLSEEKGSFN-----IFKKDLAGNSEKQITT--HTTHPVRFLTSDNSGTLC---YSYD 280

Query: 223 QQKVAYATYDDEDILRVYLM----DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            +   Y   + +   +V +         D   + + +  + I     S NGK      + 
Sbjct: 281 GE--IYTVKEGQKPAKVNIQIVADKIENDVIHRLLTDGATDI---AVSPNGKEVAFITRG 335

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D    +Y   ++   T ++TNT     +  +SPD   +V+ ++REG   +Y  +    + 
Sbjct: 336 D----VYVTSIEYETTRQITNTPQQERNIDFSPDGRSLVYSAEREGTWGIYESKLTRDED 391

Query: 339 KRISQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           K+ +   E           + F P++SP G+ +AF +       + V+ +   Q R +++
Sbjct: 392 KQFTYAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLENRTT---LRVINRKTKQVRTVLD 448

Query: 389 DSNLQAPT-------WSPSGRSLIFSRKKDGDTGS---KLYSIDLNGRNETLINTPAYAS 438
              L + +       WSP  +  +      G   +    L   D +G    L  +     
Sbjct: 449 GKYLYSYSDGDQHFQWSPDSKWFLVDYISVGGWNNTDIALVKADGSGEVTNLTESGYSDG 508

Query: 439 DPQWV 443
           D +WV
Sbjct: 509 DAKWV 513



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 85/237 (35%), Gaps = 37/237 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN ++VA+ T  D     VY+         ++I N         FS +G+  + S +
Sbjct: 321 AVSPNGKEVAFITRGD-----VYVTSIEY-ETTRQITNTPQQERNIDFSPDGRSLVYSAE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTL---------FINIS--ASYSPDSSQIVFESDREGKE 326
           ++    IY   L  +  ++ T                S    YSPD +++ F  +R    
Sbjct: 375 REGTWGIYESKLTRDEDKQFTYAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLENRT--- 431

Query: 327 QLYVMQSNGSDQKRISQDKE-ASYFDPV----WSPQGDL--IAFTKFSG-EKFAIGVMKK 378
            L V+       + +   K   SY D      WSP      + +    G     I ++K 
Sbjct: 432 TLRVINRKTKQVRTVLDGKYLYSYSDGDQHFQWSPDSKWFLVDYISVGGWNNTDIALVKA 491

Query: 379 DGSQE-RLLVEDSNLQAPT-WSPSGRSLIFSRKKDG-------DTGSKLYSIDLNGR 426
           DGS E   L E         W   G+++I+S  + G            +Y +  +G 
Sbjct: 492 DGSGEVTNLTESGYSDGDAKWVLDGKAMIWSSDRAGFRSHGSWGAERDVYIMFFDGE 548



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 89/257 (34%), Gaps = 42/257 (16%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILR------- 238
           G     +  +  DG             +     S +  K+ Y  Y   ED  R       
Sbjct: 138 GTRFMQVYEISTDGGRPDL---YSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSI 194

Query: 239 ---VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              ++L     DR+ +++  F      P ++++G       ++  + +I+  DL  N+ +
Sbjct: 195 TRDIWLCTLGKDRSFQKVTTFGGEDRNPVWAADGASFYYLSEEKGSFNIFKKDLAGNSEK 254

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK---------------- 339
           ++T      +    S +S  + +  D     ++Y ++      K                
Sbjct: 255 QITTHTTHPVRFLTSDNSGTLCYSYD----GEIYTVKEGQKPAKVNIQIVADKIENDVIH 310

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWS 398
           R+  D      D   SP G  +AF         + V   +    R +      +    +S
Sbjct: 311 RLLTDG---ATDIAVSPNGKEVAFITRGD----VYVTSIEYETTRQITNTPQQERNIDFS 363

Query: 399 PSGRSLIFSRKKDGDTG 415
           P GRSL++S +++G  G
Sbjct: 364 PDGRSLVYSAEREGTWG 380



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 7/83 (8%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKK 410
              SP G  IAF+        I  +   G + R L    ++   P WSP G+ + F+  +
Sbjct: 29  CAISPDGQTIAFSYQGD----IYTVPSSGGKARQLTTHPAHDTRPVWSPDGQRIAFASNR 84

Query: 411 DGDTGSKLYSIDLNGRNETLINT 433
            G+    ++ ++  G     + T
Sbjct: 85  SGNF--DVFLMNKEGGEPKRLTT 105



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 94/261 (36%), Gaps = 42/261 (16%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  +  +   G   R LT         P +SP+ Q++A+A+    +   V+LM+ +  
Sbjct: 41  SYQGDIYTVPSSGGKARQLTTHPAH-DTRPVWSPDGQRIAFASNRSGN-FDVFLMN-KEG 97

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI----------YSVDLQSNATERL 297
             PKR+    +      F  NG    ++    +A DI          Y +       +  
Sbjct: 98  GEPKRLTTHSTNEYPTTFKDNGHILYLANVLQDAKDIQFPGTRFMQVYEISTDGGRPDLY 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLY---------------VMQSNGSDQKRIS 342
           ++    NI  + S D S++++  D +G E  +                +  + S QK  +
Sbjct: 158 SSLYMENI--ALSKDGSKLLYN-DYKGYEDPWRKHHQSSITRDIWLCTLGKDRSFQKVTT 214

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPS 400
              E    +PVW+  G    +       F I      G+ E+ +   +      +  S +
Sbjct: 215 FGGE--DRNPVWAADGASFYYLSEEKGSFNIFKKDLAGNSEKQITTHTTHPV-RFLTSDN 271

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
             +L +S         ++Y++
Sbjct: 272 SGTLCYSYD------GEIYTV 286



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 14/141 (9%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             Q  F+P +SP+  +VA+        ++       R     K + ++       ++S +
Sbjct: 408 SGQTSFQPLYSPDGNEVAFLENRTTLRVINRKTKQVRTVLDGKYLYSYSDGDQHFQWSPD 467

Query: 269 GKRALI---SVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG 324
            K  L+   SV      DI  V          LT + + +  A +  D   +++ SDR G
Sbjct: 468 SKWFLVDYISVGGWNNTDIALVKADGSGEVTNLTESGYSDGDAKWVLDGKAMIWSSDRAG 527

Query: 325 ---------KEQLYVMQSNGS 336
                    +  +Y+M  +G 
Sbjct: 528 FRSHGSWGAERDVYIMFFDGE 548


>gi|302381963|ref|YP_003817786.1| peptidase S41 [Brevundimonas subvibrioides ATCC 15264]
 gi|302192591|gb|ADL00163.1| peptidase S41 [Brevundimonas subvibrioides ATCC 15264]
          Length = 1113

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 58/254 (22%), Positives = 92/254 (36%), Gaps = 42/254 (16%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            QIL +P  S +Q  VA+    D           R      R+     +  AP FS +G+
Sbjct: 31  SQILQQPAISADQ--VAFVYGGD------LWTVARSGGRAARLTIGVGIESAPIFSPDGR 82

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE---Q 327
               + + D  +D+Y+V        R+T     + +  +SPD S+++F S+R       Q
Sbjct: 83  SIAFTGEYDGNIDVYTVPATGGQPRRITWHPGNDAAVGWSPDGSRVLFRSNRSAASRYTQ 142

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------------------KFSGE 369
           L+ + + G     +             SP G  +A++                     G 
Sbjct: 143 LFSVSAEGGAPDVM---PLPYAHSGQMSPDGRAVAYSPFAPAFGFEFGNYTAWGNYRGGR 199

Query: 370 KFAIGVMKKDG--SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              I V   DG  + E    E SN  +P W   G  + F   +DG     +YS D     
Sbjct: 200 ASTIKVTTLDGLATVEVPQAEGSNDLSPVW--MGGKIYFLSDRDGP--ISIYSYD----P 251

Query: 428 ETLINTPAYASDPQ 441
            T    P +A+D  
Sbjct: 252 ATRAVAPVWANDGS 265



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 57/275 (20%), Positives = 96/275 (34%), Gaps = 32/275 (11%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV----------------AYATYDDEDI 236
             + DRDG    Y      + +  P ++ +   +                A +T      
Sbjct: 235 YFLSDRDGPISIYSYDPATRAV-APVWANDGSPIRSLSTDGRTLIFDRLGALSTLVPGGQ 293

Query: 237 LRVYLMDTRIDRA--PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            +   +D   D      RI N    +     S +  R  +  +     +I +  +   + 
Sbjct: 294 PQALSVDVAGDMPEARARIVNVADQVQTVSLSPSAARVAVEARG----EILTAPVTRGSV 349

Query: 295 ERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--ISQDKEASYFD 351
             LTNT  +   S ++SPD   + + SD  G   L+V   NG    R      +   Y +
Sbjct: 350 RNLTNTPGVMERSPAWSPDGQSVAYFSDESGLYALHVAPQNGEGAVRKFPLAAEPTYYAN 409

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLLVEDSNLQA--PTWSPSGRSLIFS 407
           PVWSP    IAF+      + +     +              +Q+    WSP  + L++S
Sbjct: 410 PVWSPDSKKIAFSDNHLRNWVLDTTTGRLSEVGTAQTHGGFTVQSTDMAWSPDSKFLVYS 469

Query: 408 RKKDGD-TGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R      T   LYS+  +G +  L +    A DP 
Sbjct: 470 RNGANRLTVLNLYSV-ADGSSTALTSNLGDARDPA 503



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 63/191 (32%), Gaps = 18/191 (9%)

Query: 246 IDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTL 301
              + + + N    M  +P +S +G+       +     ++          R   L    
Sbjct: 345 TRGSVRNLTNTPGVMERSPAWSPDGQSVAYFSDESGLYALHVAPQNGEGAVRKFPLAAEP 404

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-----VWSP 356
               +  +SPDS +I F    +   + +V+ +       +   +    F        WSP
Sbjct: 405 TYYANPVWSPDSKKIAFS---DNHLRNWVLDTTTGRLSEVGTAQTHGGFTVQSTDMAWSP 461

Query: 357 QGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
               + +++    +     +  +  DGS   L     + + P +   G  L +      +
Sbjct: 462 DSKFLVYSRNGANRLTVLNLYSV-ADGSSTALTSNLGDARDPAFDAGGDYLYYVAS--NN 518

Query: 414 TGSKLYSIDLN 424
            G + Y +D+ 
Sbjct: 519 AGGQTYGLDMT 529



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 83/232 (35%), Gaps = 18/232 (7%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           +    I        +  L  S + V+   +  +        ++R LT +   +   P +S
Sbjct: 307 EARARIVNVADQVQTVSLSPSAARVAVEARGEILTAPVTRGSVRNLTNTPGVMERSPAWS 366

Query: 221 PNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           P+ Q VAY + +     L V   +         +    +    P +S + K+   S   D
Sbjct: 367 PDGQSVAYFSDESGLYALHVAPQNGEGAVRKFPLAAEPTYYANPVWSPDSKKIAFS---D 423

Query: 280 EAMDIYSVDLQSNATERL----TNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQ- 332
             +  + +D  +     +    T+  F   +   ++SPDS  +V+   R G  +L V+  
Sbjct: 424 NHLRNWVLDTTTGRLSEVGTAQTHGGFTVQSTDMAWSPDSKFLVYS--RNGANRLTVLNL 481

Query: 333 ---SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              ++GS     S   +A   DP +   GD + +   +        +    +
Sbjct: 482 YSVADGSSTALTSNLGDA--RDPAFDAGGDYLYYVASNNAGGQTYGLDMTSN 531



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 56/340 (16%), Positives = 90/340 (26%), Gaps = 110/340 (32%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  + R G     LT     I   P FSP+ + +A+    D +I    +  T     P+
Sbjct: 51  DLWTVARSGGRAARLTIG-VGIESAPIFSPDGRSIAFTGEYDGNIDVYTVPAT--GGQPR 107

Query: 252 RIGNFRSMILAPRFSSNG---------------KRALISVQKDEAMDIY--------SVD 288
           RI        A  +S +G                +      +  A D+          + 
Sbjct: 108 RITWHPGNDAAVGWSPDGSRVLFRSNRSAASRYTQLFSVSAEGGAPDVMPLPYAHSGQMS 167

Query: 289 LQSNAT-----------------------------ERLTN------------TLFINISA 307
               A                               ++T                 ++S 
Sbjct: 168 PDGRAVAYSPFAPAFGFEFGNYTAWGNYRGGRASTIKVTTLDGLATVEVPQAEGSNDLSP 227

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +     +I F SDR+G   +Y            S D       PVW+  G  I      
Sbjct: 228 VWM--GGKIYFLSDRDGPISIY------------SYDPATRAVAPVWANDGSPIRSLSTD 273

Query: 368 GEKF---AIGVMKK--DGSQERLLVEDSNLQAP----------------TWSPSGRSLIF 406
           G       +G +     G Q + L  D     P                + SPS      
Sbjct: 274 GRTLIFDRLGALSTLVPGGQPQALSVDVAGDMPEARARIVNVADQVQTVSLSPS------ 327

Query: 407 SRKKDGDTGSKLYSIDLN-GRNETLINTPA-YASDPQWVG 444
           + +   +   ++ +  +  G    L NTP      P W  
Sbjct: 328 AARVAVEARGEILTAPVTRGSVRNLTNTPGVMERSPAWSP 367


>gi|262196481|ref|YP_003267690.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262079828|gb|ACY15797.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1398

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 96/260 (36%), Gaps = 13/260 (5%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VS     ++ V   DG     +    D+ ++   FSP+   +  A+ D      V +   
Sbjct: 1035 VSASADKTVRVWRADGQGQPLILRGHDEAVYSASFSPDGAHIVSASEDK----TVRVWRA 1090

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 P  +      + +  FS +G   + S  +D+ + ++  D  +     L       
Sbjct: 1091 DGQSEPLILSGHDEPVFSTSFSPDGAHIV-SASEDKTVRVWRAD-GTGEPLILRGHDDEV 1148

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             SAS+SPD + IV  S     + + V +++G  Q  I +  +       +SP G  I   
Sbjct: 1149 RSASFSPDGAHIVSAS---WDKTVRVWRADGQGQPLILRGHDDGVTSTSFSPDGAHIVSA 1205

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +  +   +      G    L   D  + + ++SP G  ++       D   ++++ D +
Sbjct: 1206 SWD-KTVRVWRADGQGQPLILRGHDKAVISASFSPDGAHIV---SAALDNTVRVWNADGS 1261

Query: 425  GRNETLINTPAYASDPQWVG 444
            G    L     + S  ++  
Sbjct: 1262 GEPLILRGHDDWVSWAEFSP 1281



 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/300 (17%), Positives = 106/300 (35%), Gaps = 15/300 (5%)

Query: 147  SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIR 204
             P +  +    +  D+   +  E  +      F  +    VS     ++ V   DG    
Sbjct: 953  PPGALHEAKRLLGSDVAPVVFTEHDEAVYSASFSPDGAHLVSTSADKTVRVWRADGTGEP 1012

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             +    D+ +    FSP+   +  A+ D      V +        P  +      + +  
Sbjct: 1013 LILRGHDEAVISASFSPDGAHIVSASADK----TVRVWRADGQGQPLILRGHDEAVYSAS 1068

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS +G   + S  +D+ + ++  D QS     L+       S S+SPD + IV  S+   
Sbjct: 1069 FSPDGAHIV-SASEDKTVRVWRADGQSEPLI-LSGHDEPVFSTSFSPDGAHIVSASE--- 1123

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             + + V +++G+ +  I +  +       +SP G  I    +  +   +      G    
Sbjct: 1124 DKTVRVWRADGTGEPLILRGHDDEVRSASFSPDGAHIVSASWD-KTVRVWRADGQGQPLI 1182

Query: 385  LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            L   D  + + ++SP G  ++ +     D   +++  D  G+   L           +  
Sbjct: 1183 LRGHDDGVTSTSFSPDGAHIVSASW---DKTVRVWRADGQGQPLILRGHDKAVISASFSP 1239



 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 92/245 (37%), Gaps = 16/245 (6%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             ++  F++        +VS     ++ V   DG     +    D  +    FSP+   + 
Sbjct: 1102 HDEPVFSTSFSPDGAHIVSASEDKTVRVWRADGTGEPLILRGHDDEVRSASFSPDGAHIV 1161

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A++D      V +        P  +      + +  FS +G   + S   D+ + ++  
Sbjct: 1162 SASWDK----TVRVWRADGQGQPLILRGHDDGVTSTSFSPDGAHIV-SASWDKTVRVWRA 1216

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            D Q        +   + ISAS+SPD + IV          + V  ++GS +  I +  + 
Sbjct: 1217 DGQGQPLILRGHDKAV-ISASFSPDGAHIV---SAALDNTVRVWNADGSGEPLILRGHDD 1272

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSL 404
                  +SP G  I           I + + DG  E +++   + Q P    +SP G+ +
Sbjct: 1273 WVSWAEFSPDGRFIVSASKDKT---IRIWRADGMGEPVILR-GHEQWPNTARFSPDGQRV 1328

Query: 405  IFSRK 409
            + +  
Sbjct: 1329 VSASD 1333



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 5/102 (4%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VS  + N++ V + DG+    +    D  +    FSP+ + +  A+ D      + +   
Sbjct: 1245 VSAALDNTVRVWNADGSGEPLILRGHDDWVSWAEFSPDGRFIVSASKDK----TIRIWRA 1300

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                 P  +          RFS +G+R ++S   D  + ++S
Sbjct: 1301 DGMGEPVILRGHEQWPNTARFSPDGQR-VVSASDDMTVRVWS 1341


>gi|325103152|ref|YP_004272806.1| amidohydrolase [Pedobacter saltans DSM 12145]
 gi|324972000|gb|ADY50984.1| amidohydrolase [Pedobacter saltans DSM 12145]
          Length = 1075

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 78/200 (39%), Gaps = 24/200 (12%)

Query: 242 MDTRIDRAPKRIGNF---RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            +      P +  NF       +    S +GK  +  +  D    IY + +     E L 
Sbjct: 23  WNIEKPSGPTKTTNFSTNEGTWMNLDVSPDGKFIVFDLLGD----IYKMPVTGGDAELLA 78

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             L   +   +SPD   I + SD++G + +++M ++GS ++ I+++      + VW+P G
Sbjct: 79  GGLAWEVQPRFSPDGKLISYTSDKDGADNIWIMNADGSGKRAITKENINLLNNAVWTPDG 138

Query: 359 DLIA-----FTKFSGEKFAIGVMKKDGS-QERLLVE----DSNLQAPTWSPSGRSLIFSR 408
             +        + +     + +    G  +   L +      NL  P  S SG+ L +S 
Sbjct: 139 QYLVARKNFLGRRTNAAGELWMYHVSGGFEGTQLTQRKRGQRNLGEPFVSKSGKELYYSE 198

Query: 409 K-------KDGDTGSKLYSI 421
                    + D   ++Y I
Sbjct: 199 DISPAYLQYNKDPNGEIYQI 218



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 44/201 (21%), Positives = 75/201 (37%), Gaps = 26/201 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +KVA++         +Y+ +   D  P+R+         P FS +G   + +   D
Sbjct: 362 SPDLKKVAFSA-----GGYIYVKNL-PDGKPERLTTETDWEFDPCFSPDGNFIIYTSWND 415

Query: 280 E-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG------------KE 326
           E    I  +DL S   ++LT       +  +S     IV+   R+G              
Sbjct: 416 ELKGSIMKIDLSSKKIDKLTPRGGFYYTPKFSNKGDLIVY---RKGVGNDLLGFTFSKNP 472

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +Y + +NG + K I ++       P ++   + I +T     K A+      G+  R  
Sbjct: 473 GIYTISANGGEPKLILKEG----LKPQFNKSDNRIFYTAKEDGKNALKSCDLSGNNIRTH 528

Query: 387 VEDSNLQAPTWSPSGRSLIFS 407
                      SP  R L FS
Sbjct: 529 YTTKLGTEFILSPDNRWLAFS 549



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 105/279 (37%), Gaps = 48/279 (17%)

Query: 204 RYLTPSRDQILFEPR--FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           R L  S+      P   + P+ + V +  Y    I ++ ++   +   P ++   +++  
Sbjct: 281 RDLQESKASYGLYPNFNWLPDNKTVIF--YAKGKINKIDILYQMVQEIPFKVNVKQTISE 338

Query: 262 APRF-------------------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           A  +                   S + K+   S        IY  +L     ERLT    
Sbjct: 339 ALHYDQKVFNEEFDAKMIRQLVTSPDLKKVAFSA----GGYIYVKNLPDGKPERLTTETD 394

Query: 303 INISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 +SPD + I++ S  +  K  +  +  +     +++      Y+ P +S +GDLI
Sbjct: 395 WEFDPCFSPDGNFIIYTSWNDELKGSIMKIDLSSKKIDKLTPRG-GFYYTPKFSNKGDLI 453

Query: 362 AFTKFSGE---------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            + K  G             I  +  +G + +L++++     P ++ S   + ++ K+DG
Sbjct: 454 VYRKGVGNDLLGFTFSKNPGIYTISANGGEPKLILKEGLK--PQFNKSDNRIFYTAKEDG 511

Query: 413 DTGSKLYSIDLNGRNET------LINTPAYASDPQWVGF 445
               K  S DL+G N        L      + D +W+ F
Sbjct: 512 KNALK--SCDLSGNNIRTHYTTKLGTEFILSPDNRWLAF 548



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 86/262 (32%), Gaps = 34/262 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  M   G +   L         +PRFSP+ + ++Y + D +    +++M+        
Sbjct: 63  DIYKMPVTGGDAE-LLAGGLAWEVQPRFSPDGKLISYTS-DKDGADNIWIMNADGSGKRA 120

Query: 252 RIGNFRSMILAPRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSN-ATERLT---NTLF 302
                 +++    ++ +G+  +     +  + + A +++   +       +LT       
Sbjct: 121 ITKENINLLNNAVWTPDGQYLVARKNFLGRRTNAAGELWMYHVSGGFEGTQLTQRKRGQR 180

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGS--DQKRI---------SQDKEASYFD 351
                  S    ++ +  D       Y    NG     KR+                   
Sbjct: 181 NLGEPFVSKSGKELYYSEDISPAYLQYNKDPNGEIYQIKRLILEDETVENVAGGTGGAVR 240

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED------------SNLQAPTWSP 399
           P  SP G  +A+ K +  K  + +   +  +E +L +D                   W P
Sbjct: 241 PQVSPNGKYLAYVKRNKLKTNLMIQDLETGEEFILYDDLSRDLQESKASYGLYPNFNWLP 300

Query: 400 SGRSLIFSRKKDGDTGSKLYSI 421
             +++IF  K   +    LY +
Sbjct: 301 DNKTVIFYAKGKINKIDILYQM 322



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 51/138 (36%), Gaps = 16/138 (11%)

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           I+F     G    + ++      K  +    E ++ +   SP G  I F         I 
Sbjct: 10  ILFVLISSGLHAQWNIEKPSGPTKTTNFSTNEGTWMNLDVSPDGKFIVFDLLGD----IY 65

Query: 375 VMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET---- 429
            M   G    LL      +  P +SP G+ + ++  KDG     ++ ++ +G  +     
Sbjct: 66  KMPVTGGDAELLAGGLAWEVQPRFSPDGKLISYTSDKDG--ADNIWIMNADGSGKRAITK 123

Query: 430 ----LINTPAYASDPQWV 443
               L+N   +  D Q++
Sbjct: 124 ENINLLNNAVWTPDGQYL 141


>gi|262384211|ref|ZP_06077347.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295109|gb|EEY83041.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 1076

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 71/204 (34%), Gaps = 30/204 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G+    S Q D    IY+V        +LT     +    +SPD  +I F S+R 
Sbjct: 30  AISPDGQTIAFSYQGD----IYTVPSSGGKARQLTTHPAHDTRPVWSPDGQRIAFASNRS 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF-A 372
           G   +++M   G + KR++     + +   +   G  I +           +F G +F  
Sbjct: 86  GNFDVFLMNKEGGEPKRLTT-HSTNEYPTTFKDNG-HILYLANVLQDAKDIQFPGTRFMQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSID 422
           +  +  DG +   L     ++    S  G  L+++  K                 ++   
Sbjct: 144 VYEISTDGGRPD-LYSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSITRDIWLCT 202

Query: 423 L--NGRNETLINTPAYASDPQWVG 444
           L  +   + +        +P W  
Sbjct: 203 LGKDRSFQKVTTFGGEDRNPVWAA 226



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 80/242 (33%), Gaps = 39/242 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ Q +A++     DI  V           +++    +    P +S +G+R   +  
Sbjct: 30  AISPDGQTIAFSY--QGDIYTV----PSSGGKARQLTTHPAHDTRPVWSPDGQRIAFASN 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------------FESDREGK 325
           +    D++ ++ +    +RLT         ++  +   +             F   R   
Sbjct: 84  RSGNFDVFLMNKEGGEPKRLTTHSTNEYPTTFKDNGHILYLANVLQDAKDIQFPGTR--F 141

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAI 373
            Q+Y + ++G    R          +   S  G  + +               S     I
Sbjct: 142 MQVYEISTDGG---RPDLYSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSITRDI 198

Query: 374 GVMKK--DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +     D S +++       + P W+  G S  +  ++ G     ++  DL G +E  I
Sbjct: 199 WLCTLGKDRSFQKVTTFGGEDRNPVWAADGASFYYLSEEKGSF--NIFKKDLAGNSEKQI 256

Query: 432 NT 433
            T
Sbjct: 257 TT 258



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 57/305 (18%), Positives = 116/305 (38%), Gaps = 46/305 (15%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ EKG FN     + +  ++G  +  +         +R+LT      L    +S +
Sbjct: 231 FYYLSEEKGSFN-----IFKKDLAGNSEKQITT--HTTHPVRFLTSDNSGTLC---YSYD 280

Query: 223 QQKVAYATYDDEDILRVYLM----DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            +   Y   + +   +V +         D   + + +  + I     S NGK      + 
Sbjct: 281 GE--IYTVKEGQKPAKVNIQIVADKIENDVIHRLLTDGATDI---AVSPNGKEVAFITRG 335

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D    +Y   ++   T ++TNT     +  +SPD   +V+ ++REG   +Y  +    + 
Sbjct: 336 D----VYVTSIEYETTRQITNTPQQERNIDFSPDGRSLVYSAEREGTWGIYESKLTRDED 391

Query: 339 KRISQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           K+ +   E           + F P++SP G+ +AF +       + V+ +   Q R +++
Sbjct: 392 KQFTYAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLENRTT---LRVINRKTKQVRTVLD 448

Query: 389 DSNLQAPT-------WSPSGRSLIFSRKKDGDTGS---KLYSIDLNGRNETLINTPAYAS 438
              L + +       WSP  +  +      G   +    L   D +G    L  +     
Sbjct: 449 GKYLYSYSDGDQHFQWSPDSKWFLVDYISIGGWNNTDIALVKADGSGEVTNLTESGYSDG 508

Query: 439 DPQWV 443
           D +WV
Sbjct: 509 DAKWV 513



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 89/257 (34%), Gaps = 42/257 (16%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILR------- 238
           G     +  +  DG             +     S +  K+ Y  Y   ED  R       
Sbjct: 138 GTRFMQVYEISTDGGRPDL---YSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSI 194

Query: 239 ---VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              ++L     DR+ +++  F      P ++++G       ++  + +I+  DL  N+ +
Sbjct: 195 TRDIWLCTLGKDRSFQKVTTFGGEDRNPVWAADGASFYYLSEEKGSFNIFKKDLAGNSEK 254

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK---------------- 339
           ++T      +    S +S  + +  D     ++Y ++      K                
Sbjct: 255 QITTHTTHPVRFLTSDNSGTLCYSYD----GEIYTVKEGQKPAKVNIQIVADKIENDVIH 310

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWS 398
           R+  D      D   SP G  +AF         + V   +    R +      +    +S
Sbjct: 311 RLLTDG---ATDIAVSPNGKEVAFITRGD----VYVTSIEYETTRQITNTPQQERNIDFS 363

Query: 399 PSGRSLIFSRKKDGDTG 415
           P GRSL++S +++G  G
Sbjct: 364 PDGRSLVYSAEREGTWG 380



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 7/83 (8%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKK 410
              SP G  IAF+        I  +   G + R L    ++   P WSP G+ + F+  +
Sbjct: 29  CAISPDGQTIAFSYQGD----IYTVPSSGGKARQLTTHPAHDTRPVWSPDGQRIAFASNR 84

Query: 411 DGDTGSKLYSIDLNGRNETLINT 433
            G+    ++ ++  G     + T
Sbjct: 85  SGNF--DVFLMNKEGGEPKRLTT 105



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 94/261 (36%), Gaps = 42/261 (16%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  +  +   G   R LT         P +SP+ Q++A+A+    +   V+LM+ +  
Sbjct: 41  SYQGDIYTVPSSGGKARQLTTHPAH-DTRPVWSPDGQRIAFASNRSGN-FDVFLMN-KEG 97

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI----------YSVDLQSNATERL 297
             PKR+    +      F  NG    ++    +A DI          Y +       +  
Sbjct: 98  GEPKRLTTHSTNEYPTTFKDNGHILYLANVLQDAKDIQFPGTRFMQVYEISTDGGRPDLY 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLY---------------VMQSNGSDQKRIS 342
           ++    NI  + S D S++++  D +G E  +                +  + S QK  +
Sbjct: 158 SSLYMENI--ALSKDGSKLLYN-DYKGYEDPWRKHHQSSITRDIWLCTLGKDRSFQKVTT 214

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPS 400
              E    +PVW+  G    +       F I      G+ E+ +   +      +  S +
Sbjct: 215 FGGE--DRNPVWAADGASFYYLSEEKGSFNIFKKDLAGNSEKQITTHTTHPV-RFLTSDN 271

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
             +L +S         ++Y++
Sbjct: 272 SGTLCYSYD------GEIYTV 286



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 63/154 (40%), Gaps = 16/154 (10%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             Q  F+P +SP+  +VA+        ++       R     K + ++       ++S +
Sbjct: 408 SGQTSFQPLYSPDGNEVAFLENRTTLRVINRKTKQVRTVLDGKYLYSYSDGDQHFQWSPD 467

Query: 269 GKRALI---SVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG 324
            K  L+   S+      DI  V          LT + + +  A +  D   +++ SDR G
Sbjct: 468 SKWFLVDYISIGGWNNTDIALVKADGSGEVTNLTESGYSDGDAKWVLDGKAMIWSSDRAG 527

Query: 325 ---------KEQLYVMQSNGS--DQKRISQDKEA 347
                    +  +Y+M  +G   D+ R+S++++A
Sbjct: 528 FRSHGSWGAERDVYIMFFDGEAYDKFRLSKEEQA 561


>gi|154493786|ref|ZP_02033106.1| hypothetical protein PARMER_03129 [Parabacteroides merdae ATCC
           43184]
 gi|154086399|gb|EDN85444.1| hypothetical protein PARMER_03129 [Parabacteroides merdae ATCC
           43184]
          Length = 1083

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 90/257 (35%), Gaps = 37/257 (14%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                L  +    +  P  SPN + +A+      DI  V            ++    +  
Sbjct: 13  FTANVLAENDPLWMRYPAISPNGETIAFTY--KGDIYTV----PANGGKATQLTTHPAHD 66

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
             P +S +G +   +  ++   DI+ +D++  + ++LT         ++S D+  I++ +
Sbjct: 67  TRPIWSPDGSKIAFASDRNGNFDIFIMDMEGGSPKQLTTHSANEYPETFS-DAKHILYSA 125

Query: 321 ----------DREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------ 363
                        G+  Q+Y +  NG   +  S     S      + +GD + +      
Sbjct: 126 AIQQDAKDSQFPSGQFPQIYRIGINGGRPELYSSLAMESL---ALNKKGDKLLYQDKKGY 182

Query: 364 ------TKFSGEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                    S     I +   D   S +++       + P W+  G S  +  ++ G   
Sbjct: 183 EDPWRKHHQSSITRDIWLCTLDREHSFQKITSFKGEDRNPVWATDGSSFYYLSEEKGSF- 241

Query: 416 SKLYSIDLNGRNETLIN 432
             ++  DL GRN   I 
Sbjct: 242 -NIFKNDLTGRNSRQIT 257



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 75/203 (36%), Gaps = 30/203 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S NG+    + + D    IY+V        +LT     +    +SPD S+I F SDR
Sbjct: 29  PAISPNGETIAFTYKGD----IYTVPANGGKATQLTTHPAHDTRPIWSPDGSKIAFASDR 84

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF- 371
            G   +++M   G   K+++    A+ +   +S     I +          ++F   +F 
Sbjct: 85  NGNFDIFIMDMEGGSPKQLTT-HSANEYPETFS-DAKHILYSAAIQQDAKDSQFPSGQFP 142

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF----------SRKKDGDTGSKLYSI 421
            I  +  +G +   L     +++   +  G  L++           +         ++  
Sbjct: 143 QIYRIGINGGRPE-LYSSLAMESLALNKKGDKLLYQDKKGYEDPWRKHHQSSITRDIWLC 201

Query: 422 DLNGRN--ETLINTPAYASDPQW 442
            L+  +  + + +      +P W
Sbjct: 202 TLDREHSFQKITSFKGEDRNPVW 224



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 55/304 (18%), Positives = 108/304 (35%), Gaps = 44/304 (14%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ EKG FN   +F ++       + +   M      +R+LT   +  L    +  +
Sbjct: 231 FYYLSEEKGSFN---IFKNDLTGRNSRQITNHTMHP----VRFLTSDNNGNLC---YGYD 280

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQKDEA 281
            +   Y   +     +V +           I   + S       S NGK     V+ D  
Sbjct: 281 GE--IYTVKEGTQPKKVDVQIISDKVENDLIHQLKASGATDIAVSPNGKEVAFIVRGD-- 336

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +Y   +    T+++TNT        +SPD   +V+ ++R     +Y       + K  
Sbjct: 337 --VYVTSVDYETTKQITNTPQQERDLDFSPDGRSLVYSAERGETWGVYQSSLVRKNDKYF 394

Query: 342 SQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           +  +E           + F P++SP G  +AF +       + V+     Q R +++   
Sbjct: 395 TYAQELKEEPLVVNSQTSFQPMYSPDGKEVAFLENRTT---LRVINLKNKQVRTVLDGKY 451

Query: 392 LQAPT-------WSPSGRSLIFSRKK---DGDTGSKLYSIDLNGRNE--TLINTPAYASD 439
             +         WSP  +   F  K     G   + +  +  +G  E   L  +    ++
Sbjct: 452 NYSYADGDQYYQWSPDSKW--FLAKYIAIGGWNNTDIVLVKADGSGEMTNLTESGYSDNN 509

Query: 440 PQWV 443
            +WV
Sbjct: 510 AKWV 513



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 79/237 (33%), Gaps = 37/237 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN ++VA+    D     VY+         K+I N         FS +G+  + S +
Sbjct: 321 AVSPNGKEVAFIVRGD-----VYVTSVDY-ETTKQITNTPQQERDLDFSPDGRSLVYSAE 374

Query: 278 KDEAMDIYSVDLQSNATERLTN-----------TLFINISASYSPDSSQIVFESDREGKE 326
           + E   +Y   L     +  T                +    YSPD  ++ F  +R    
Sbjct: 375 RGETWGVYQSSLVRKNDKYFTYAQELKEEPLVVNSQTSFQPMYSPDGKEVAFLENRT--- 431

Query: 327 QLYVMQSNGSDQKRISQDKEASYFD-----PVWSPQGDLIA--FTKFSG-EKFAIGVMKK 378
            L V+       + +   K    +        WSP        +    G     I ++K 
Sbjct: 432 TLRVINLKNKQVRTVLDGKYNYSYADGDQYYQWSPDSKWFLAKYIAIGGWNNTDIVLVKA 491

Query: 379 DGSQE-RLLVEDS-NLQAPTWSPSGRSLIFSRKKDG-------DTGSKLYSIDLNGR 426
           DGS E   L E   +     W   G+++I+S  + G            +Y +  +G 
Sbjct: 492 DGSGEMTNLTESGYSDNNAKWVLDGKAMIWSSDRAGYRSHGSWGAEDDIYIMFFDGE 548



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 99/319 (31%), Gaps = 92/319 (28%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---- 230
           S+I F S+   +      + +MD +G + + LT       +   FS + + + Y+     
Sbjct: 76  SKIAFASDRNGN----FDIFIMDMEGGSPKQLTT-HSANEYPETFS-DAKHILYSAAIQQ 129

Query: 231 ------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--------- 275
                 +      ++Y +     R P+   +     LA   +  G + L           
Sbjct: 130 DAKDSQFPSGQFPQIYRIGINGGR-PELYSSLAMESLA--LNKKGDKLLYQDKKGYEDPW 186

Query: 276 -----VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                      + + ++D +  + +++T+    + +  ++ D S   + S+ +G   ++ 
Sbjct: 187 RKHHQSSITRDIWLCTLDREH-SFQKITSFKGEDRNPVWATDGSSFYYLSEEKGSFNIFK 245

Query: 331 MQSNGSDQKRISQ-----------DKEASY------------------------------ 349
               G + ++I+            D   +                               
Sbjct: 246 NDLTGRNSRQITNHTMHPVRFLTSDNNGNLCYGYDGEIYTVKEGTQPKKVDVQIISDKVE 305

Query: 350 ------------FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-T 396
                        D   SP G  +AF         + V   D    + +      +    
Sbjct: 306 NDLIHQLKASGATDIAVSPNGKEVAFIVRGD----VYVTSVDYETTKQITNTPQQERDLD 361

Query: 397 WSPSGRSLIFSRKKDGDTG 415
           +SP GRSL++S ++    G
Sbjct: 362 FSPDGRSLVYSAERGETWG 380



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 65/154 (42%), Gaps = 16/154 (10%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             Q  F+P +SP+ ++VA+        ++ +     R     K   ++       ++S +
Sbjct: 408 NSQTSFQPMYSPDGKEVAFLENRTTLRVINLKNKQVRTVLDGKYNYSYADGDQYYQWSPD 467

Query: 269 GKRAL---ISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG 324
            K  L   I++      DI  V          LT + + + +A +  D   +++ SDR G
Sbjct: 468 SKWFLAKYIAIGGWNNTDIVLVKADGSGEMTNLTESGYSDNNAKWVLDGKAMIWSSDRAG 527

Query: 325 K---------EQLYVMQSNGS--DQKRISQDKEA 347
                     + +Y+M  +G   D+ R++++++A
Sbjct: 528 YRSHGSWGAEDDIYIMFFDGEAYDKFRLTKEEQA 561



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           ++ P  SP+G ++ F+ K        +Y++  NG   T + T PA+ + P W  
Sbjct: 26  MRYPAISPNGETIAFTYK------GDIYTVPANGGKATQLTTHPAHDTRPIWSP 73


>gi|262198210|ref|YP_003269419.1| peptidase M28 [Haliangium ochraceum DSM 14365]
 gi|262081557|gb|ACY17526.1| peptidase M28 [Haliangium ochraceum DSM 14365]
          Length = 944

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 92/267 (34%), Gaps = 42/267 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-------------YDDEDILR 238
            +  M  DG+    +  +         F P    + Y++                  +  
Sbjct: 98  QIMRMPADGSAEPRVVSTGKGRTTCAYFLPGDDDIVYSSTHELGPECPPEADMSQGYVWS 157

Query: 239 VYLMDT----RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +Y  D             +             +     L +  +D  +++Y +D      
Sbjct: 158 LYDYDIYRAKADGSELVNLTQRDGYDAEATVCAKDGTILFTSDRDGDLELYRMDPNGENV 217

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKE-------------------QLYVMQSNG 335
            RLTNT   +  A +S D SQIV+ + R   E                   ++YV  ++G
Sbjct: 218 VRLTNTPGYDGGAFFSQDCSQIVWRASRPQGEALADFQRLLGEGLVRPSLLEIYVADADG 277

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKKDGSQ-ERLLVEDS 390
            + ++I+    A+ F P + P G  + F+       G +F I  +  DG+  E++   + 
Sbjct: 278 QNARQITYLG-AAAFAPYFHPSGKRVLFSTNYPNPRGREFDIWSVNTDGTGLEQITFSEG 336

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSK 417
               P +SP G  L F+  ++     +
Sbjct: 337 FDGFPMFSPDGTKLAFASNRNNSKPGE 363



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 81/234 (34%), Gaps = 27/234 (11%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           DDI  S T E G        +S+  V  +    +     DG+ +  LT            
Sbjct: 130 DDIVYSSTHELGPECPPEADMSQGYVWSLYDYDIYRAKADGSELVNLTQRDGYDAEATVC 189

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +   + + +  D D L +Y MD        R+ N         FS +  + +    + 
Sbjct: 190 AKDG-TILFTSDRDGD-LELYRMDPN-GENVVRLTNTPGYDGGAFFSQDCSQIVWRASRP 246

Query: 280 EA-------------------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +                    ++IY  D       ++T       +  + P   +++F +
Sbjct: 247 QGEALADFQRLLGEGLVRPSLLEIYVADADGQNARQITYLGAAAFAPYFHPSGKRVLFST 306

Query: 321 D----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +    R  +  ++ + ++G+  ++I+   E     P++SP G  +AF       
Sbjct: 307 NYPNPRGREFDIWSVNTDGTGLEQITF-SEGFDGFPMFSPDGTKLAFASNRNNS 359



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 69/167 (41%), Gaps = 28/167 (16%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPV 353
           +LT+    N  A +S D  +++F+S R     +Q+  M ++GS + R+    +       
Sbjct: 66  QLTDG-GENAEAYWSFDGDELIFQSKRPPYECDQIMRMPADGSAEPRVVSTGKGRTTCAY 124

Query: 354 WSPQGDLIAFTKFSGEK-------------------FAIGVMKKDGSQERLLV--EDSNL 392
           + P  D I ++                         + I   K DGS+   L   +  + 
Sbjct: 125 FLPGDDDIVYSSTHELGPECPPEADMSQGYVWSLYDYDIYRAKADGSELVNLTQRDGYDA 184

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYAS 438
           +A   +  G  ++F+  +DGD   +LY +D NG N   L NTP Y  
Sbjct: 185 EATVCAKDGT-ILFTSDRDGD--LELYRMDPNGENVVRLTNTPGYDG 228



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 65/223 (29%), Gaps = 41/223 (18%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERL-TNTLFINISASYSP 311
                     +S +G   +   ++       I  +    +A  R+ +        A + P
Sbjct: 68  TDGGENAEAYWSFDGDELIFQSKRPPYECDQIMRMPADGSAEPRVVSTGKGRTTCAYFLP 127

Query: 312 DSSQIVFESDREGKEQ-------------------LYVMQSNGSDQKRISQDKEASYFDP 352
               IV+ S  E   +                   +Y  +++GS+   ++Q         
Sbjct: 128 GDDDIVYSSTHELGPECPPEADMSQGYVWSLYDYDIYRAKADGSELVNLTQRDGYDAEAT 187

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIF-SRKK 410
           V +  G  I FT        +  M  +G     L           +S     +++ + + 
Sbjct: 188 VCAKDGT-ILFTSDRDGDLELYRMDPNGENVVRLTNTPGYDGGAFFSQDCSQIVWRASRP 246

Query: 411 DGD----------------TGSKLYSIDLNGRNETLINTPAYA 437
            G+                +  ++Y  D +G+N   I     A
Sbjct: 247 QGEALADFQRLLGEGLVRPSLLEIYVADADGQNARQITYLGAA 289



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 3/123 (2%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
              I    +  +G+  +    +    +       + V D DG N R +T       F P 
Sbjct: 236 CSQIVWRASRPQGEALADFQRLLGEGLVRPSLLEIYVADADGQNARQIT-YLGAAAFAPY 294

Query: 219 FSPNQQKVAYAT-YDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISV 276
           F P+ ++V ++T Y +       +     D    ++I         P FS +G +   + 
Sbjct: 295 FHPSGKRVLFSTNYPNPRGREFDIWSVNTDGTGLEQITFSEGFDGFPMFSPDGTKLAFAS 354

Query: 277 QKD 279
            ++
Sbjct: 355 NRN 357


>gi|299146617|ref|ZP_07039685.1| MdsD protein [Bacteroides sp. 3_1_23]
 gi|298517108|gb|EFI40989.1| MdsD protein [Bacteroides sp. 3_1_23]
          Length = 1119

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 80/236 (33%), Gaps = 34/236 (14%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            + + R SP+  ++ +      DI +V            ++    S    P +S +GK+ 
Sbjct: 24  WMRDARISPDGSEIVFCY--KGDIYKVPAQ----GGTAVQLTTQTSYEANPVWSPDGKQI 77

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
             +  ++   D++ +     A  RLT      I ++++PD   + F +            
Sbjct: 78  AFASDRNGNFDLFIMPADGGAARRLTYHSASEIPSAFTPDGKYVFFSASIQDPASSALFP 137

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGE 369
                +LY +   G   +++     A       +  G    +               S  
Sbjct: 138 TGAMTELYKVPVAGGRTEQVL-GTPAELVCFDKT--GKNFLYQDRKGFEDEWRKHHTSSI 194

Query: 370 KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              I +      +   L       + P ++P G ++ F  ++DG +   +Y+  LN
Sbjct: 195 TRDIWLYNTQTGKHTNLTNRGGEDRNPVYTPDGNAVYFLSERDGGS-FNVYTFPLN 249



 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 34/221 (15%)

Query: 252 RIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +    S  + P +      S +G   +   + D    IY V  Q     +LT       
Sbjct: 11  VLSALSSYAITPLWMRDARISPDGSEIVFCYKGD----IYKVPAQGGTAVQLTTQTSYEA 66

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  +SPD  QI F SDR G   L++M ++G   +R++    AS     ++P G  + F+ 
Sbjct: 67  NPVWSPDGKQIAFASDRNGNFDLFIMPADGGAARRLTY-HSASEIPSAFTPDGKYVFFSA 125

Query: 366 F-----------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--- 411
                       +G    +  +   G +   ++     +   +  +G++ ++  +K    
Sbjct: 126 SIQDPASSALFPTGAMTELYKVPVAGGRTEQVLGTP-AELVCFDKTGKNFLYQDRKGFED 184

Query: 412 -------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                        ++  +   G++  L N      +P +  
Sbjct: 185 EWRKHHTSSITRDIWLYNTQTGKHTNLTNRGGEDRNPVYTP 225



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/236 (20%), Positives = 86/236 (36%), Gaps = 28/236 (11%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y         +V +   R D        F     +   S +GK+    V+ D    ++  
Sbjct: 285 YTQKSGARPEKVKVELVRDDEQQLATLKFSQGATSASVSPDGKQIAFIVRGD----VFVT 340

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM-----------QSNGS 336
                 T+++TNT     + S++PD+  +V+ S+R G  QLY              +   
Sbjct: 341 STDYATTKQITNTPAKEAAVSFAPDNRTLVYASERTGNWQLYTAKISRKEDPNFPNATLI 400

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--- 393
           +++ +   K      P +SP G  +AF +       + V+     + R + + S      
Sbjct: 401 EEEVLLPSKTVERTYPQYSPDGKELAFIEDRN---RLMVLNLKTKKVRQVTDGSTWYNTG 457

Query: 394 ---APTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQWV 443
                 WSP G+   L F   +  D  S +  +   G   T +    Y S  P+WV
Sbjct: 458 GGFDYEWSPDGKWFTLEFIGNRH-DPYSDVGIVSAQGGAITNLTNSGYISGAPRWV 512



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 76/215 (35%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A+    D        + +      K+I N  +   A  F+ + +  + + +
Sbjct: 321 SVSPDGKQIAFIVRGD------VFVTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN------------ISASYSPDSSQIVFESDREGK 325
           +     +Y+  +         N   I                 YSPD  ++ F  DR   
Sbjct: 375 RTGNWQLYTAKISRKEDPNFPNATLIEEEVLLPSKTVERTYPQYSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+       ++++           FD  WSP G    + F     + +  +G++  
Sbjct: 432 NRLMVLNLKTKKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDVGIVSA 491

Query: 379 DGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G     L     +  AP W   G +++F  ++ G
Sbjct: 492 QGGAITNLTNSGYISGAPRWVLDGNAILFQTERYG 526



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 78/234 (33%), Gaps = 32/234 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +SP+ +++A+A+  + +     +       
Sbjct: 41  YKGDIYKVPAQGGTAVQLTTQTS-YEANPVWSPDGKQIAFASDRNGNFDLFIM--PADGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERL 297
           A +R+    +  +   F+ +GK    S                  ++Y V +    TE++
Sbjct: 98  AARRLTYHSASEIPSAFTPDGKYVFFSASIQDPASSALFPTGAMTELYKVPVAGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   +       +++ DR+G                +++  +       ++  
Sbjct: 158 LGTPAELV--CFDKTGKNFLYQ-DRKGFEDEWRKHHTSSITRDIWLYNTQTGKHTNLTNR 214

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 +PV++P G+ + F ++  G  F +     +  QE   V         +
Sbjct: 215 G-GEDRNPVYTPDGNAVYFLSERDGGSFNVYTFPLNTPQEVKAVTTFKTHPVRF 267



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 85/220 (38%), Gaps = 22/220 (10%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK     V   ++ V        K+  ++PA    ++    +      +   G+
Sbjct: 320 ASVSPDGKQIAFIVRGDVF-VTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASERTGN 378

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +      +S          +L            L PS+      P++SP+ +++A+    
Sbjct: 379 WQLYTAKISRKEDPNFPNATLI-------EEEVLLPSKTVERTYPQYSPDGKELAFI--- 428

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRA---LISVQKDEAMDI 284
            ED  R+ +++ +  +  +++ +              +S +GK      I  + D   D+
Sbjct: 429 -EDRNRLMVLNLKT-KKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDV 486

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
             V  Q  A   LTN+ +I+ +  +  D + I+F+++R G
Sbjct: 487 GIVSAQGGAITNLTNSGYISGAPRWVLDGNAILFQTERYG 526


>gi|290955378|ref|YP_003486560.1| hypothetical protein SCAB_8041 [Streptomyces scabiei 87.22]
 gi|260644904|emb|CBG67990.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 1070

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 61/302 (20%), Positives = 109/302 (36%), Gaps = 41/302 (13%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
             T  + +  +R   +    V  + +      + D    R         +  P  SP+ +
Sbjct: 318 RFTLVRPEAPARTETIPFRAVLPVDRPRRRTKEYDLGEARVRPARG---IHLPALSPDGR 374

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQKDEAM 282
            VA+A  +      ++L  T   R P+R+        +LAP ++ +G+  + +  +D  +
Sbjct: 375 SVAFAALNA-----LWLARTAGGRPPRRLRQSPPTRWLLAPAWAPDGRSLVYADDRDGLL 429

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI- 341
            +Y  DL +     L       +  + SPD  ++    D  G  +L V      +++ + 
Sbjct: 430 GVYRHDLATGEETALATGG--RVMPALSPDGRRLA-CLDMAG--RLVVRDLASGEERVLV 484

Query: 342 -SQDKEASYFDPVWSPQGDLIAFTKFS--GEKFA-----IGVMKKDGSQERL-------L 386
                      P WSP G  +A    +  G +F      I V+      +RL        
Sbjct: 485 EPLGGGGLPGRPSWSPDGRYLALCDRNRLGARFREGYNLIRVVDATTGADRLHAVAPHAS 544

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN----GRNETLINTPAYASDPQW 442
           + D     P WSP GR +        ++  +L  +  +    GR  TL   PA    P W
Sbjct: 545 IADRYDSGPVWSPDGRWMAVIV----ESALRLLPVTPDGTPRGRLRTLTTDPAD--HPTW 598

Query: 443 VG 444
            G
Sbjct: 599 SG 600



 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 79/379 (20%), Positives = 126/379 (33%), Gaps = 63/379 (16%)

Query: 91  ITNPDSIPRFQDWNSLGAQVLVT--GR---VIKEGKDRLR-VEFRLWDVKDRKQIIGKKF 144
             + D  P    W + G ++L+T  GR   V  E   R   + FR     DR +   K++
Sbjct: 293 PVDGDLAPVPPRWTARG-ELLLTLDGRFTLVRPEAPARTETIPFRAVLPVDRPRRRTKEY 351

Query: 145 FSSPASWR--KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
               A  R  +  H  +                  L      V+    N+L +    G  
Sbjct: 352 DLGEARVRPARGIHLPA------------------LSPDGRSVAFAALNALWLARTAGGR 393

Query: 203 IRYLTPSRDQ--ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                        L  P ++P+ + + YA  D + +L VY  D             R   
Sbjct: 394 PPRRLRQSPPTRWLLAPAWAPDGRSLVYAD-DRDGLLGVYRHDLATGEETALATGGR--- 449

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIV 317
           + P  S +G+R       D A  +   DL S     L        +    S+SPD   + 
Sbjct: 450 VMPALSPDGRRLAC---LDMAGRLVVRDLASGEERVLVEPLGGGGLPGRPSWSPDGRYLA 506

Query: 318 FE-------SDREGKEQLYVMQSNGSDQKRISQDKEAS-----YFDPVWSPQGDLIAFTK 365
                      REG   + V+ +     +  +    AS        PVWSP G  +A   
Sbjct: 507 LCDRNRLGARFREGYNLIRVVDATTGADRLHAVAPHASIADRYDSGPVWSPDGRWMAVI- 565

Query: 366 FSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  +  +  DG    + R L  D     PTWS   R+L+        +G++L  +D
Sbjct: 566 -VESALRLLPVTPDGTPRGRLRTLTTDPAD-HPTWSGDSRTLLH------QSGTRLRLVD 617

Query: 423 LNGRNETLINTPAYASDPQ 441
           ++G     +  P   + P 
Sbjct: 618 VSGGRPRTVRVPLDRTRPT 636



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 81/213 (38%), Gaps = 35/213 (16%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G        +     ++++    +  +R T+  + + + ++SPD +++ F S+R
Sbjct: 99  PTHSPDGDLVAFCAYQGGGFHLWTMRPDGSELKRRTDGPWDDRAPAWSPDGTRLAFCSER 158

Query: 323 EGK---------EQLYVMQSNGSDQKRIS---------QDKEASYFDPVWSPQGDLIAFT 364
            G           +++V+     +  R++         QD     FDP WSP G  + F 
Sbjct: 159 GGDPDRPGGGCPYRVHVLDLATGEITRVTGLPGQDGPLQDGGWEDFDPTWSPDGSRLLFV 218

Query: 365 KF---------SGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKD 411
           +          S E   +  +  DG+    +     E + +  P  +P GR L + R   
Sbjct: 219 RGKVVTTGSTPSVEARTVAAVAADGTGPVTVAHTETEAAQVMTPALAPDGR-LAYLRTTP 277

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              G+   ++ + G    +    A    P+W  
Sbjct: 278 APHGT--CTLVVAGEPVPVDGDLAPVP-PRWTA 307



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 70/184 (38%), Gaps = 25/184 (13%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +   R+   A   ++ G   +  VQ      ++S+         LT         ++SPD
Sbjct: 49  LTFTRATNGAATLATGGDTLIAEVQSG----LWSLPRGGGRAVPLTPAGLEPNRPTHSPD 104

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-- 370
              + F + + G   L+ M+ +GS+ KR + D       P WSP G  +AF    G    
Sbjct: 105 GDLVAFCAYQGGGFHLWTMRPDGSELKRRT-DGPWDDRAPAWSPDGTRLAFCSERGGDPD 163

Query: 371 -------FAIGVMKKDGSQERLLV---------EDSNLQ--APTWSPSGRSLIFSRKKDG 412
                  + + V+     +   +          +D   +   PTWSP G  L+F R K  
Sbjct: 164 RPGGGCPYRVHVLDLATGEITRVTGLPGQDGPLQDGGWEDFDPTWSPDGSRLLFVRGKVV 223

Query: 413 DTGS 416
            TGS
Sbjct: 224 TTGS 227



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 76/206 (36%), Gaps = 34/206 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L  + R G     LTP+  +    P  SP+   VA+  Y       ++ M        +R
Sbjct: 76  LWSLPRGGGRAVPLTPAGLEPN-RPTHSPDGDLVAFCAY-QGGGFHLWTMRPDGSELKRR 133

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEA---------MDIYSVDLQSNATERLT----- 298
             +      AP +S +G R     ++              ++ +DL +    R+T     
Sbjct: 134 -TDGPWDDRAPAWSPDGTRLAFCSERGGDPDRPGGGCPYRVHVLDLATGEITRVTGLPGQ 192

Query: 299 -----NTLFINISASYSPDSSQIVFESDR---EGK------EQLYVMQSNGSDQKRI--S 342
                +  + +   ++SPD S+++F   +    G         +  + ++G+    +  +
Sbjct: 193 DGPLQDGGWEDFDPTWSPDGSRLLFVRGKVVTTGSTPSVEARTVAAVAADGTGPVTVAHT 252

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSG 368
           + + A    P  +P G  +A+ + + 
Sbjct: 253 ETEAAQVMTPALAPDGR-LAYLRTTP 277



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 373 IGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETL 430
           +  + + G +   L         PT SP G  + F   + G  G  L+++  +G   +  
Sbjct: 76  LWSLPRGGGRAVPLTPAGLEPNRPTHSPDGDLVAFCAYQGG--GFHLWTMRPDGSELKRR 133

Query: 431 INTPAYASDPQWVG 444
            + P     P W  
Sbjct: 134 TDGPWDDRAPAWSP 147


>gi|224023742|ref|ZP_03642108.1| hypothetical protein BACCOPRO_00458 [Bacteroides coprophilus DSM
           18228]
 gi|224016964|gb|EEF74976.1| hypothetical protein BACCOPRO_00458 [Bacteroides coprophilus DSM
           18228]
          Length = 1088

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 75/205 (36%), Gaps = 31/205 (15%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G+      + D    IY+V        +LT     +    +SPDS +I F S+R+
Sbjct: 30  AISPDGQTIAFCYKGD----IYTVPANGGKATQLTTNAAHDTHPIWSPDSKKIAFASNRQ 85

Query: 324 GKEQLYVMQSNGSDQKRISQ-----------DKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           G   +Y++   G   +R++            D E   +     P    + F   SG+   
Sbjct: 86  GSMDIYIIDKEGGTPQRLTTHSANEFPVTFKDAEHILYLSSLMPDAADMTF--PSGQFPQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSID 422
           +  +  +G +   L     ++  ++S  G+SL++  +K                 ++   
Sbjct: 144 VYEISTEGGRPT-LFSSLPMEDISFSKDGKSLLYHDRKGYEDAWRKHHTSSITRDIWMCQ 202

Query: 423 LNGRNET---LINTPAYASDPQWVG 444
           LNG  +T   L +       P W  
Sbjct: 203 LNGNEKTYRKLTSFRGEDRTPIWSA 227



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 86/242 (35%), Gaps = 40/242 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ Q +A+      DI  V            ++    +    P +S + K+   +  
Sbjct: 30  AISPDGQTIAFCY--KGDIYTV----PANGGKATQLTTNAAHDTHPIWSPDSKKIAFASN 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASY------------SPDSSQIVFESDREGK 325
           +  +MDIY +D +    +RLT         ++             PD++ + F S +   
Sbjct: 84  RQGSMDIYIIDKEGGTPQRLTTHSANEFPVTFKDAEHILYLSSLMPDAADMTFPSGQ--F 141

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------------FAI 373
            Q+Y + + G    R +        D  +S  G  + +    G +              I
Sbjct: 142 PQVYEISTEGG---RPTLFSSLPMEDISFSKDGKSLLYHDRKGYEDAWRKHHTSSITRDI 198

Query: 374 GVMKKDGSQ--ERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            + + +G++   R L       + P WS   +S  +  +  G     ++  +L+G NE  
Sbjct: 199 WMCQLNGNEKTYRKLTSFRGEDRTPIWSADSQSFYYLSESKGSF--NVFKRNLDGSNEKQ 256

Query: 431 IN 432
           + 
Sbjct: 257 LT 258



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 69/354 (19%), Positives = 117/354 (33%), Gaps = 52/354 (14%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISD--------------DIYQSITGEKGDFNSRILF 179
           KD K ++         +WRK  H  S                 Y+ +T  +G+  + I  
Sbjct: 169 KDGKSLLYHDRKGYEDAWRK--HHTSSITRDIWMCQLNGNEKTYRKLTSFRGEDRTPIWS 226

Query: 180 VSESV----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ------QKVAYA 229
                           ++   + DG+N + LT      +     + N           Y 
Sbjct: 227 ADSQSFYYLSESKGSFNVFKRNLDGSNEKQLTQHTKHPVRFLSAASNGMLCYGYDGEIYT 286

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + E   +V +           I   R S       S +GK     +  D    ++   
Sbjct: 287 VKEGEKPHKVEISIVADKNDKDLIRQVRTSGATEIAVSPSGKEVAFILHGD----VFVTS 342

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-- 346
           ++ N T+++TNT     + S++PD   + + S+REG  Q+Y       D K  +   E  
Sbjct: 343 VEYNTTKQITNTPEQERNLSFAPDGRSLAYSSEREGLWQVYQSSLTNKDDKLFTYANEIK 402

Query: 347 --------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK------KDGSQERLLVEDSNL 392
                   A+ F P +SP G  IAF +       + +         DG  E    +    
Sbjct: 403 EERLTNSTAASFQPQYSPDGKEIAFLENRTTLRILNLKDKSVRTAMDGKYEYSYTDGDQW 462

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGS---KLYSIDLNGRNETLINTPAYASDPQWV 443
               WSP  R L+     +G   +    L +   NG    L  +     + +WV
Sbjct: 463 FE--WSPDSRWLLSGYIGNGGWNNSDVALVNASGNGEIHNLTQSGYSDGNAKWV 514



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 54/356 (15%), Positives = 119/356 (33%), Gaps = 95/356 (26%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR-----------DQILFEPRFSPN 222
           + +I F S    S      + ++D++G   + LT              + IL+     P+
Sbjct: 75  SKKIAFASNRQGS----MDIYIIDKEGGTPQRLTTHSANEFPVTFKDAEHILYLSSLMPD 130

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-------- 274
              + + +       +VY + T   R P    +     ++  FS +GK  L         
Sbjct: 131 AADMTFPS---GQFPQVYEISTEGGR-PTLFSSLPMEDIS--FSKDGKSLLYHDRKGYED 184

Query: 275 ------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                 +      + +  ++       +LT+    + +  +S DS    + S+ +G   +
Sbjct: 185 AWRKHHTSSITRDIWMCQLNGNEKTYRKLTSFRGEDRTPIWSADSQSFYYLSESKGSFNV 244

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDL---------------------IAFTKFS 367
           +    +GS++K+++Q  +        +  G L                     I+     
Sbjct: 245 FKRNLDGSNEKQLTQHTKHPVRFLSAASNGMLCYGYDGEIYTVKEGEKPHKVEISIVADK 304

Query: 368 GEKFAIGVMKKDGSQE-----------------------------RLLVEDSNLQAPTWS 398
            +K  I  ++  G+ E                             ++       +  +++
Sbjct: 305 NDKDLIRQVRTSGATEIAVSPSGKEVAFILHGDVFVTSVEYNTTKQITNTPEQERNLSFA 364

Query: 399 PSGRSLIFSRKKDG----------DTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           P GRSL +S +++G          +   KL++     + E L N+ A +  PQ+  
Sbjct: 365 PDGRSLAYSSEREGLWQVYQSSLTNKDDKLFTYANEIKEERLTNSTAASFQPQYSP 420



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 81/225 (36%), Gaps = 32/225 (14%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +  +G     LT +       P +SP+ +K+A+A+      + +Y++D +   
Sbjct: 42  YKGDIYTVPANGGKATQLTTNAAH-DTHPIWSPDSKKIAFASNRQGS-MDIYIID-KEGG 98

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERL 297
            P+R+    +      F  + +  L                 +   +Y +  +       
Sbjct: 99  TPQRLTTHSANEFPVTF-KDAEHILYLSSLMPDAADMTFPSGQFPQVYEISTEGGRPTLF 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQK-RISQ 343
           ++    +IS  +S D   +++  DR+G                +++ Q NG+++  R   
Sbjct: 158 SSLPMEDIS--FSKDGKSLLYH-DRKGYEDAWRKHHTSSITRDIWMCQLNGNEKTYRKLT 214

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                   P+WS       +   S   F +     DGS E+ L +
Sbjct: 215 SFRGEDRTPIWSADSQSFYYLSESKGSFNVFKRNLDGSNEKQLTQ 259



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 36/99 (36%), Gaps = 7/99 (7%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSG 401
           QD          SP G  IAF         I  +  +G +   L  + ++   P WSP  
Sbjct: 20  QDNPLWMRYCAISPDGQTIAFCYKGD----IYTVPANGGKATQLTTNAAHDTHPIWSPDS 75

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + + F+  + G     +Y ID  G     + T +    P
Sbjct: 76  KKIAFASNRQGSM--DIYIIDKEGGTPQRLTTHSANEFP 112



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 47/123 (38%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             +     F+P++SP+ +++A+        IL +     R     K   ++        +
Sbjct: 406 LTNSTAASFQPQYSPDGKEIAFLENRTTLRILNLKDKSVRTAMDGKYEYSYTDGDQWFEW 465

Query: 266 SSNGKRALISVQKDE---AMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + +  L     +      D+  V+         LT + + + +A +      +++ESD
Sbjct: 466 SPDSRWLLSGYIGNGGWNNSDVALVNASGNGEIHNLTQSGYSDGNAKWVLGGKAMIWESD 525

Query: 322 REG 324
           R G
Sbjct: 526 RAG 528


>gi|148655245|ref|YP_001275450.1| peptidase S41 [Roseiflexus sp. RS-1]
 gi|148567355|gb|ABQ89500.1| peptidase S41 [Roseiflexus sp. RS-1]
          Length = 1104

 Score =  114 bits (286), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/177 (24%), Positives = 72/177 (40%), Gaps = 15/177 (8%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D++ V        RLT       S + SPD + + F    EG  +++VM + G + +R
Sbjct: 22  EDDLWLVAASGGVARRLTANPGSVQSPALSPDGTLLAFVGRDEGPGEVFVMLAVGGEARR 81

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDGSQERLLVEDSNLQAPT 396
           ++   E +     WS  G  I F   +   F+    +  +  DG + RLL     +   +
Sbjct: 82  LTFLGE-TMRVCGWSRNGRDILFASSAHSPFSRSPLLYAVAADGGEPRLLPTGPAVHV-S 139

Query: 397 WSPSGRSLI---------FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           + P G  +I         + R + G TG      D +G    LI+ P   + P WVG
Sbjct: 140 YGPDGGMVIGRNESDPARWKRYRGGRTGDVWIDPDGSGEWRRLISLPGNIAIPLWVG 196



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 67/205 (32%), Gaps = 22/205 (10%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +        +R+      + +P  S +G       + +   +++ +        RLT  
Sbjct: 26  WLVAASGGVARRLTANPGSVQSPALSPDGTLLAFVGRDEGPGEVFVMLAVGGEARRLTFL 85

Query: 301 LFINISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                   +S +   I+F S           LY + ++G + + +            + P
Sbjct: 86  GETMRVCGWSRNGRDILFASSAHSPFSRSPLLYAVAADGGEPRLL---PTGPAVHVSYGP 142

Query: 357 QGDLIA---------FTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
            G ++          + ++ G +     +  DGS E  RL+    N+  P W   G  + 
Sbjct: 143 DGGMVIGRNESDPARWKRYRGGRTGDVWIDPDGSGEWRRLISLPGNIAIPLWV--GDRIY 200

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETL 430
           F    +G     LYS    G +   
Sbjct: 201 FVSDHEG--VGNLYSCLPTGEDLQR 223



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 69/239 (28%), Gaps = 23/239 (9%)

Query: 162 IYQSITGEKGDFNSRILFVSES----VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           + + +T   G   S  L    +    V        + VM   G   R LT   + +    
Sbjct: 34  VARRLTANPGSVQSPALSPDGTLLAFVGRDEGPGEVFVMLAVGGEARRLTFLGETMRVC- 92

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---- 273
            +S N + + +A+       R  L+        +         +   +  +G   +    
Sbjct: 93  GWSRNGRDILFASSAHSPFSRSPLLYAVAADGGEPRLLPTGPAVHVSYGPDGGMVIGRNE 152

Query: 274 -----ISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                    +        +D        RL +         +     +I F SD EG   
Sbjct: 153 SDPARWKRYRGGRTGDVWIDPDGSGEWRRLISLPGNIAIPLWV--GDRIYFVSDHEGVGN 210

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           LY     G D +R +  +E     P  S  G  I +   +     + +     +  R +
Sbjct: 211 LYSCLPTGEDLQRHTWHREYYARFP--STDGRRIVYHAGAD----LYLFDPATNGSRKI 263



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/347 (14%), Positives = 100/347 (28%), Gaps = 90/347 (25%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---- 230
            RI FVS+    G     L      G +++  T  R+     P  S + +++ Y      
Sbjct: 197 DRIYFVSDHEGVGN----LYSCLPTGEDLQRHTWHREYYARFP--STDGRRIVYHAGADL 250

Query: 231 ------YDDEDILRVYLMDTRIDRAPKRI-----------------------------GN 255
                  +    + + L   R  R  + +                             GN
Sbjct: 251 YLFDPATNGSRKIEIELHSPRTQRKRRFVDPARFLQSVALHPEGHSLVAVVRGKPFTFGN 310

Query: 256 FRSMILA-----------PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +   +L              +  +G+R ++         +    +     +    T   +
Sbjct: 311 WEGAVLQYGDPGAVRYRLADWLPDGRRIVVVSDAAGEEMLEVHPVTLGNGQVAPRTDVAD 370

Query: 305 ISA--------------------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +                            + SP +  +   ++R    +L ++  N    
Sbjct: 371 VQPGTGSSTLLFEEPVRLDGLDIGRPLTLAVSPKAPLVALANNR---NELLLVDLNDRSV 427

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVEDSN-LQAPT 396
           + + + + AS     WSP G  +A+  +  E+   I + +        +       ++P 
Sbjct: 428 RLLDRSRYASMPGIAWSPDGRWLAYGFWETEQTSVIKLCEIATGTITPVTRPVLVDRSPA 487

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
           + P G+ L F   +D D        DL    G    L+   A    P
Sbjct: 488 FDPEGKYLYFISYRDLDPVRDDIHFDLGFPRGARPFLVTLRADLRSP 534


>gi|262196570|ref|YP_003267779.1| hypothetical protein Hoch_3384 [Haliangium ochraceum DSM 14365]
 gi|262079917|gb|ACY15886.1| WD40 domain protein beta Propeller [Haliangium ochraceum DSM 14365]
          Length = 398

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 26/215 (12%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEA----MDIYSVDLQ-SNATERLTNTLFINI 305
            RI        +P +S +G+  + +  +         ++ V  +      RLT+  F + 
Sbjct: 94  TRIAQVPVRDNSPSWSPDGRWIVFASSRGREDMMQTSLWLVAARLDAQPRRLTSGDFEDR 153

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQ----------SNGSDQKRISQDKEASYFDPVWS 355
             ++S D S +VF S+R G   ++  +          + G+  + I+ ++ A  F P  +
Sbjct: 154 DPAWSADGSAVVFSSNRGGSFAIWRQELSMSDYGWPIAAGAPSQLIASERAA--FHPAPA 211

Query: 356 PQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS---RKK 410
           P G  IA+T+         I +      + + L E  +   P WSP GR L F+    ++
Sbjct: 212 PDGSAIAYTEADLESGASEIWLWSA--GERQRLSEGPSDSTPAWSPDGRRLAFAGLVERE 269

Query: 411 DGDTGSKLYSIDLNGRNET-LINTP-AYASDPQWV 443
                  L++++ +G     LI  P A  + P W 
Sbjct: 270 GQPPDVDLFTMNADGSGRAPLIAEPLALQTHPVWS 304



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 98/238 (41%), Gaps = 32/238 (13%)

Query: 217 PRFSPNQQKVAYATYDDEDIL---RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           P +SP+ + + +A+    + +    ++L+  R+D  P+R+ +       P +S++G   +
Sbjct: 106 PSWSPDGRWIVFASSRGREDMMQTSLWLVAARLDAQPRRLTSGDFEDRDPAWSADGSAVV 165

Query: 274 ISVQKDEAMDIYSV---------DLQSNATERLTNTLFINISASYSPDSSQIVFE-SD-R 322
            S  +  +  I+            + + A  +L  +       + +PD S I +  +D  
Sbjct: 166 FSSNRGGSFAIWRQELSMSDYGWPIAAGAPSQLIASERAAFHPAPAPDGSAIAYTEADLE 225

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----SGEKFAIGVMK 377
            G  ++++  +   +++R+S+    S   P WSP G  +AF              +  M 
Sbjct: 226 SGASEIWLWSA--GERQRLSEGP--SDSTPAWSPDGRRLAFAGLVEREGQPPDVDLFTMN 281

Query: 378 KDGSQERLLVEDSNL--QAPTWSPSGRSL-IFSRKKDGDTGSKL------YSIDLNGR 426
            DGS    L+ +       P WS  GR L   S  +  D+G  +       +ID  GR
Sbjct: 282 ADGSGRAPLIAEPLALQTHPVWSRDGRHLFATSLYRSVDSGKPILSSITFVAIDAEGR 339



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 16/167 (9%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----LYVMQSNGSDQKRISQDKEA 347
               R+      + S S+SPD   IVF S R  ++     L+++ +    Q R     + 
Sbjct: 91  GDLTRIAQVPVRDNSPSWSPDGRWIVFASSRGREDMMQTSLWLVAARLDAQPRRLTSGDF 150

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD----------GSQERLLVEDSNLQAPTW 397
              DP WS  G  + F+   G  FAI   +            G+  +L+  +     P  
Sbjct: 151 EDRDPAWSADGSAVVFSSNRGGSFAIWRQELSMSDYGWPIAAGAPSQLIASERAAFHPAP 210

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +P G ++ ++        S+++     G  + L   P+ ++ P W  
Sbjct: 211 APDGSAIAYTEADLESGASEIWLWSA-GERQRLSEGPSDST-PAWSP 255



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 88/243 (36%), Gaps = 20/243 (8%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR-ILFVSESVVSGIIKNSL 193
            R ++ G+  F   +  R+   T    +           + R I+F S      +++ SL
Sbjct: 72  QRARLGGRLVFIDESGVRRGDLTRIAQVPVRDNSPSWSPDGRWIVFASSRGREDMMQTSL 131

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI--------LRVYLMDTR 245
            ++            S D    +P +S +   V +++              +  Y     
Sbjct: 132 WLVAARLDAQPRRLTSGDFEDRDPAWSADGSAVVFSSNRGGSFAIWRQELSMSDYGWPIA 191

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFI 303
                + I + R     P  + +G     +    +  A +I+     +   +RL+     
Sbjct: 192 AGAPSQLIASER-AAFHPAPAPDGSAIAYTEADLESGASEIWL--WSAGERQRLSEGPS- 247

Query: 304 NISASYSPDSSQIVFES--DREGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           + + ++SPD  ++ F    +REG+     L+ M ++GS +  +  +  A    PVWS  G
Sbjct: 248 DSTPAWSPDGRRLAFAGLVEREGQPPDVDLFTMNADGSGRAPLIAEPLALQTHPVWSRDG 307

Query: 359 DLI 361
             +
Sbjct: 308 RHL 310


>gi|157273491|gb|ABV27390.1| prolyl oligopeptidase family protein [Candidatus
           Chloracidobacterium thermophilum]
          Length = 691

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 85/244 (34%), Gaps = 62/244 (25%)

Query: 261 LAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            A   S +GK    +    +        +++ +        +L +  +      +SPDS 
Sbjct: 49  TAVAVSPDGKYLAYTQGVPDKAANRIQYELWVMPTGGGPAHQLVSGPYSATDPCWSPDSQ 108

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--------- 365
            I F S+R+GK Q++ +  NG + ++++ D   +    +W+  G  + F           
Sbjct: 109 TIAFVSNRDGKAQIWTVHRNGGEPRKVT-DFFTNVSGILWTADGRHLIFVAEVYPECPDE 167

Query: 366 -------------------------------FSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                                            G +  I V+  +G   + L    +  A
Sbjct: 168 DCNRRKYAAVEASKVKAYIADRLLYRHWDSFKGGRRTHIFVVPVEGGVAKDLT-PGDYDA 226

Query: 395 PTW---------SPSGRSLIFSRKKDGD----TGSKLYSIDLNGRNETLINT-PAYASDP 440
           P +         SP G+ L F+R  D D    T + ++ + L G     I+T P   + P
Sbjct: 227 PPFSLSGRDYDVSPDGKELAFARNTDRDEAISTNNDIFIVPLGGGEPKRISTSPGSDTHP 286

Query: 441 QWVG 444
           ++  
Sbjct: 287 RYSP 290



 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 110/315 (34%), Gaps = 68/315 (21%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +  I+  L VM   G     L  S      +P +SP+ Q +A+ +  D    +++ +  R
Sbjct: 71  ANRIQYELWVMPTGGGPAHQLV-SGPYSATDPCWSPDSQTIAFVSNRDGKA-QIWTVH-R 127

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALI------------------------------- 274
               P+++ +F + +    ++++G+  +                                
Sbjct: 128 NGGEPRKVTDFFTNVSGILWTADGRHLIFVAEVYPECPDEDCNRRKYAAVEASKVKAYIA 187

Query: 275 ---------SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--------YSPDSSQIV 317
                    S +      I+ V ++    + LT     +             SPD  ++ 
Sbjct: 188 DRLLYRHWDSFKGGRRTHIFVVPVEGGVAKDLTPG-DYDAPPFSLSGRDYDVSPDGKELA 246

Query: 318 F--ESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           F   +DR+        ++++   G + KRIS     S   P +SP G  IA+       F
Sbjct: 247 FARNTDRDEAISTNNDIFIVPLGGGEPKRIST-SPGSDTHPRYSPDGKYIAWLSQERAMF 305

Query: 372 A-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + + ++   + R L +  D +     WSP  ++L  +    G     ++++ L 
Sbjct: 306 ESDKKQVILYERATGKLRRLSDKVDISFDELAWSPDSQTLFLTGDHRGQVP--VFTLTLA 363

Query: 425 GRNETLINTPAYASD 439
           G +  ++       +
Sbjct: 364 GNDVRMLVEQGQNGN 378



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 12/179 (6%)

Query: 265 FSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            S +GK    +   D         DI+ V L     +R++ +   +    YSPD   I +
Sbjct: 238 VSPDGKELAFARNTDRDEAISTNNDIFIVPLGGGEPKRISTSPGSDTHPRYSPDGKYIAW 297

Query: 319 ESDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            S         K+Q+ + +      +R+S   + S+ +  WSP    +  T     +  +
Sbjct: 298 LSQERAMFESDKKQVILYERATGKLRRLSDKVDISFDELAWSPDSQTLFLTGDHRGQVPV 357

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +   G+  R+LVE       + +P G++L F++        +++S+   G     I 
Sbjct: 358 FTLTLAGNDVRMLVEQGQNGNLSVAPDGKTLYFTQSTLTRPN-EIFSVATTGGTPKQIT 415



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 34/289 (11%), Positives = 82/289 (28%), Gaps = 62/289 (21%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+ + +AY     +        +  +         ++ +       P +S + +   
Sbjct: 52  AVSPDGKYLAYTQGVPDKAANRIQYELWVMPTGGGPAHQLVSGPYSATDPCWSPDSQTIA 111

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------------- 319
               +D    I++V        ++T+         ++ D   ++F               
Sbjct: 112 FVSNRDGKAQIWTVHRNGGEPRKVTDFFTNVSGILWTADGRHLIFVAEVYPECPDEDCNR 171

Query: 320 ---------------SDR-----------EGKEQLYVMQSNGSDQKRISQDKEA------ 347
                          +DR             +  ++V+   G   K ++           
Sbjct: 172 RKYAAVEASKVKAYIADRLLYRHWDSFKGGRRTHIFVVPVEGGVAKDLTPGDYDAPPFSL 231

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPS 400
           S  D   SP G  +AF + +           I ++   G +  R+     +   P +SP 
Sbjct: 232 SGRDYDVSPDGKELAFARNTDRDEAISTNNDIFIVPLGGGEPKRISTSPGSDTHPRYSPD 291

Query: 401 GRSLIFSRKKDGDTGS---KLYSIDLNGRNETLINTPAYASDP--QWVG 444
           G+ + +  ++     S   ++   +        ++     S     W  
Sbjct: 292 GKYIAWLSQERAMFESDKKQVILYERATGKLRRLSDKVDISFDELAWSP 340



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 69/172 (40%), Gaps = 7/172 (4%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD---DEDILRVYLMDT 244
              N + ++   G   + ++ S       PR+SP+ + +A+ + +    E   +  ++  
Sbjct: 258 STNNDIFIVPLGGGEPKRISTS-PGSDTHPRYSPDGKYIAWLSQERAMFESDKKQVILYE 316

Query: 245 RIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           R     +R+ +   +      +S + +   ++      + ++++ L  N    L      
Sbjct: 317 RATGKLRRLSDKVDISFDELAWSPDSQTLFLTGDHRGQVPVFTLTLAGNDVRMLV-EQGQ 375

Query: 304 NISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           N + S +PD   + F  S      +++ + + G   K+I++  EA   +  +
Sbjct: 376 NGNLSVAPDGKTLYFTQSTLTRPNEIFSVATTGGTPKQITRVNEAFLAEIAF 427



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 36/102 (35%), Gaps = 22/102 (21%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           + ++  WS      A+       F       D  + R L       A   SP G+ L ++
Sbjct: 21  AAWNVTWSA-----AYAASRPMSFD------DLVKLRRLT------AVAVSPDGKYLAYT 63

Query: 408 R----KKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
           +    K       +L+ +   G     L++ P  A+DP W  
Sbjct: 64  QGVPDKAANRIQYELWVMPTGGGPAHQLVSGPYSATDPCWSP 105


>gi|149182429|ref|ZP_01860905.1| YuxL [Bacillus sp. SG-1]
 gi|148849892|gb|EDL64066.1| YuxL [Bacillus sp. SG-1]
          Length = 651

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 83/239 (34%), Gaps = 49/239 (20%)

Query: 214 LFEPRFSPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           + +P+ SPN ++ AY   +      + I  +Y +D +  ++ +     ++   +PR+S +
Sbjct: 12  VSDPKISPNGEEAAYVITEMDEETNKYISNLYHLDIKTGKSTQW-TFGKNRNTSPRWSPD 70

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--------- 319
           G + +    + +   ++ +        +LT          +SP   ++ F          
Sbjct: 71  GGKVVFVSDRSDKSQLFLLLRSGGEARQLTFCPNGASQPVWSPCGKKVAFSTALMEGETL 130

Query: 320 ---------------------SDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                                SD  G     +  + V+     D K I+ + E  Y    
Sbjct: 131 TEGKEEDKHPQPLEVTTMKYKSDDSGFFNGKRNHIAVIDVETLDMKLIT-EGEIDYSLQS 189

Query: 354 WSPQGDLIAF----TKFSGEKF--AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
           WSP G  IA+    +      F   + +   + S ER +        +  WSP   S+ 
Sbjct: 190 WSPNGRYIAYGADKSADLDNSFLSDLFLYDVEESTERKVTSGTGYFGSAAWSPDSSSIA 248



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 52/309 (16%), Positives = 102/309 (33%), Gaps = 77/309 (24%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---- 230
            +++FVS+       K+ L ++ R G   R LT   +    +P +SP  +KVA++T    
Sbjct: 72  GKVVFVSDR----SDKSQLFLLLRSGGEARQLTFCPNG-ASQPVWSPCGKKVAFSTALME 126

Query: 231 ------------------------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                                         + +     + ++D       K I       
Sbjct: 127 GETLTEGKEEDKHPQPLEVTTMKYKSDDSGFFNGKRNHIAVIDVETLDM-KLITEGEIDY 185

Query: 261 LAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               +S NG+           +      D++  D++ +   ++T+      SA++SPDSS
Sbjct: 186 SLQSWSPNGRYIAYGADKSADLDNSFLSDLFLYDVEESTERKVTSGTGYFGSAAWSPDSS 245

Query: 315 QIVFESDREGKEQ-----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            I         +      +++ +        ++ + +        SP GD +    F   
Sbjct: 246 SIAILGHESEYQNATLTKVWLYEMETGSLSCMTSELD--------SPAGDFMV-IDFQQG 296

Query: 370 KFAIGVM-KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL------YSID 422
               GV    D      L  D          +G ++++   +DG     L      Y  D
Sbjct: 297 VSNPGVQWASDNDSFYFLTSD----------NGNTVLYYGNRDGSLYPALLDNQHVYGFD 346

Query: 423 LNGRNETLI 431
           L+ + +  I
Sbjct: 347 LDRKQQKAI 355


>gi|257455247|ref|ZP_05620482.1| putative TolB periplasmic receptor [Enhydrobacter aerosaccus SK60]
 gi|257447209|gb|EEV22217.1| putative TolB periplasmic receptor [Enhydrobacter aerosaccus SK60]
          Length = 335

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 93/240 (38%), Gaps = 9/240 (3%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +++F+  +      +  L     DG++ + L      I+     S    ++ +     
Sbjct: 56  SGKLIFIYLTGFGENRQAQLIETQIDGSDPKTLYKVNGTIMSLSA-SRLGDRLIFTVQAG 114

Query: 234 EDILRVYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
               +V ++D    +  +   +   R+   +   S +G++ L++  +    +I+  D   
Sbjct: 115 NSYPQVVILDRATLQVTEISAVSGRRTHNFSGAISPDGRQLLLANSQMGNPEIFLTDSSG 174

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASY 349
           N  ++LT+   I+++  + PD    +F SD+    + QLY           ++   + + 
Sbjct: 175 NVKQQLTHQPAIDLAPVWLPDGQSFIFTSDKAKFLQPQLYQYYFAKQQFLPLNLPGKTNA 234

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                SP G LI +   + +     +      +   +  +   +   +SP G  L++S K
Sbjct: 235 IA-RISPTGRLITYVSDNSQG---RLADMATKKSIAINNEGLAEPANFSPDGNYLLYSAK 290



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 55/174 (31%), Gaps = 7/174 (4%)

Query: 269 GKRALISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           GK   I +          +    +  +  + L       +S S S    +++F       
Sbjct: 57  GKLIFIYLTGFGENRQAQLIETQIDGSDPKTLYKVNGTIMSLSASRLGDRLIFTVQAGNS 116

Query: 326 -EQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             Q+ ++         IS    +    F    SP G  +           I +    G+ 
Sbjct: 117 YPQVVILDRATLQVTEISAVSGRRTHNFSGAISPDGRQLLLANSQMGNPEIFLTDSSGNV 176

Query: 383 ERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           ++ L     +  AP W P G+S IF+  K      +LY      +    +N P 
Sbjct: 177 KQQLTHQPAIDLAPVWLPDGQSFIFTSDKAKFLQPQLYQYYFAKQQFLPLNLPG 230


>gi|299138250|ref|ZP_07031429.1| WD40 domain protein beta Propeller [Acidobacterium sp. MP5ACTX8]
 gi|298599496|gb|EFI55655.1| WD40 domain protein beta Propeller [Acidobacterium sp. MP5ACTX8]
          Length = 321

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 88/241 (36%), Gaps = 22/241 (9%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                +++ + V D    + + +    D I   P +SP+ + +   +      L      
Sbjct: 24  GAEAPMRSRIYVYDLRTHSSKLIFT-ADTIWEAPNWSPDGKYLISNSGGMIHKLNFKNDG 82

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTL 301
           T  +    +I            S +GK    S  + E    ++Y      +  +++TN  
Sbjct: 83  TVEESEKLKIPEDYHCNNDKALSPDGKWLAFSASQGEEHGSEVYLAHADGSEVKQMTN-- 140

Query: 302 FINISAS----YSPDSSQIVFESDR--EGKE-QLYVMQSNGSDQKRISQDKEASYFDPVW 354
              +S S    +SPDS  I + + R   GK+  +Y   + G ++ R++         P +
Sbjct: 141 ---VSPSYFHGWSPDSKTIAYVAQRPVGGKQYDIYGQPATGGEETRLTS-SPGQDDGPDY 196

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQ------ERLLVEDSNLQAPTWSPSGRSLIFSR 408
           SP G  I       +K  +      G+       ER++ +      P  SP G+ L++  
Sbjct: 197 SPDGKWIYINSNRSDKEEVWRFPATGAGENDAKAERIVSDSMQDWFPHISPDGKRLVYIA 256

Query: 409 K 409
            
Sbjct: 257 Y 257



 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 76/218 (34%), Gaps = 27/218 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + +A++    E+      +        K++ N         +S + K      Q
Sbjct: 103 ALSPDGKWLAFSASQGEEHGSEVYLAHADGSEVKQMTNVSPSYFH-GWSPDSKTIAYVAQ 161

Query: 278 K---DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +    +  DIY          RLT++   +    YSPD   I   S+R  KE+++   + 
Sbjct: 162 RPVGGKQYDIYGQPATGGEETRLTSSPGQDDGPDYSPDGKWIYINSNRSDKEEVWRFPAT 221

Query: 335 GSD-----QKRISQDKEASYFDPVWSPQGDLIAF-------TKFSGEKFAIGVMKKD--- 379
           G+       +RI  D    +F P  SP G  + +       T        I     D   
Sbjct: 222 GAGENDAKAERIVSDSMQDWF-PHISPDGKRLVYIAYPADVTTHDPRNVHIVFKLVDIHN 280

Query: 380 ---GSQERLLVE----DSNLQAPTWSPSGRSLIFSRKK 410
                 +++LVE      ++   +W+P      +   +
Sbjct: 281 NKVSKSQKVLVEASGGQGSMNVNSWAPDSMRFAYVTYE 318



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 82/217 (37%), Gaps = 21/217 (9%)

Query: 226 VAYATYDDED----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +A+A+           R+Y+ D R     K I    ++  AP +S +GK   IS      
Sbjct: 16  LAFASMAHGAEAPMRSRIYVYDLRTHS-SKLIFTADTIWEAPNWSPDGKYL-ISNSGGMI 73

Query: 282 MDIYSVDLQSNATE----RLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNG 335
             +   +      E    ++      N   + SPD   + F + +      ++Y+  ++G
Sbjct: 74  HKLNFKN-DGTVEESEKLKIPEDYHCNNDKALSPDGKWLAFSASQGEEHGSEVYLAHADG 132

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMKKDGSQERLLVED-SN 391
           S+ K+++    + +    WSP    IA+       G+++ I      G +E  L      
Sbjct: 133 SEVKQMTNVSPSYFHG--WSPDSKTIAYVAQRPVGGKQYDIYGQPATGGEETRLTSSPGQ 190

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              P +SP G+ +  +  +      +++     G  E
Sbjct: 191 DDGPDYSPDGKWIYINSNRSDK--EEVWRFPATGAGE 225



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 50/140 (35%), Gaps = 13/140 (9%)

Query: 315 QIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            + F S   G     + ++YV        K I    +  +  P WSP G  +     SG 
Sbjct: 15  SLAFASMAHGAEAPMRSRIYVYDLRTHSSKLI-FTADTIWEAPNWSPDGKYL--ISNSGG 71

Query: 370 KFAIGVMKKDGSQER----LLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  K DG+ E      + ED +       SP G+ L FS  +  + GS++Y    +
Sbjct: 72  MIHKLNFKNDGTVEESEKLKIPEDYHCNNDKALSPDGKWLAFSASQGEEHGSEVYLAHAD 131

Query: 425 GRNETLINTPAYASDPQWVG 444
           G     +   + +    W  
Sbjct: 132 GSEVKQMTNVSPSYFHGWSP 151


>gi|298376888|ref|ZP_06986842.1| MdsD protein [Bacteroides sp. 3_1_19]
 gi|298265872|gb|EFI07531.1| MdsD protein [Bacteroides sp. 3_1_19]
          Length = 1076

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 70/204 (34%), Gaps = 30/204 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G+    S Q D    IY+V        +LT     +    +SPD  +I F S+R 
Sbjct: 30  AISPDGQTIAFSYQGD----IYTVPSSGGKARQLTTHPAHDTRPVWSPDGQKIAFASNRS 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF-A 372
           G   +++M   G + KR++     + +   +   G  I +           +F G +F  
Sbjct: 86  GNFDVFLMNKEGGEPKRLTT-HSTNEYPTTFKDNG-HILYLANILQDAKDIQFPGTRFMQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSID 422
           +  +  DG +   L     ++    S  G  L+++  K                 ++   
Sbjct: 144 VYEISTDGGRPD-LYSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSITRDIWLCT 202

Query: 423 L--NGRNETLINTPAYASDPQWVG 444
           L  +     +        +P W  
Sbjct: 203 LGKDRSFRKVTTFGGEDRNPVWAA 226



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 79/242 (32%), Gaps = 39/242 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ Q +A++     DI  V           +++    +    P +S +G++   +  
Sbjct: 30  AISPDGQTIAFSY--QGDIYTV----PSSGGKARQLTTHPAHDTRPVWSPDGQKIAFASN 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------------FESDREGK 325
           +    D++ ++ +    +RLT         ++  +   +             F   R   
Sbjct: 84  RSGNFDVFLMNKEGGEPKRLTTHSTNEYPTTFKDNGHILYLANILQDAKDIQFPGTR--F 141

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAI 373
            Q+Y + ++G    R          +   S  G  + +               S     I
Sbjct: 142 MQVYEISTDGG---RPDLYSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSITRDI 198

Query: 374 GVMKK--DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +     D S  ++       + P W+  G S  +  ++ G     ++  DL G +E  I
Sbjct: 199 WLCTLGKDRSFRKVTTFGGEDRNPVWAADGASFYYLSEEKGSF--NIFKKDLAGNSEKQI 256

Query: 432 NT 433
            T
Sbjct: 257 TT 258



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 57/305 (18%), Positives = 116/305 (38%), Gaps = 46/305 (15%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ EKG FN     + +  ++G  +  +         +R+LT      L    +S +
Sbjct: 231 FYYLSEEKGSFN-----IFKKDLAGNSEKQITT--HTTHPVRFLTSDNSGTLC---YSYD 280

Query: 223 QQKVAYATYDDEDILRVYLM----DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            +   Y   + +   +V +         D   + + +  + I     S NGK      + 
Sbjct: 281 GE--IYTVKEGQKPAKVNIQIVADKIENDVIHRLLTDGATDI---AVSPNGKEVAFITRG 335

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D    +Y   ++   T ++TNT     +  +SPD   +V+ ++REG   +Y  +    + 
Sbjct: 336 D----VYVTSIEYETTRQITNTPQQERNIDFSPDGRSLVYSAEREGTWGIYESKLTRDED 391

Query: 339 KRISQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           K+ +   E           + F P++SP G+ +AF +       + V+ +   Q R +++
Sbjct: 392 KQFTYAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLENRTT---LRVINRKTKQVRTVLD 448

Query: 389 DSNLQAPT-------WSPSGRSLIFSRKKDGDTGS---KLYSIDLNGRNETLINTPAYAS 438
              L + +       WSP  +  +      G   +    L   D +G    L  +     
Sbjct: 449 GKYLYSYSDGDQHFQWSPDSKWFLVDYISVGGWNNTDIALVKADGSGEVTNLTESGYSDG 508

Query: 439 DPQWV 443
           D +WV
Sbjct: 509 DAKWV 513



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 85/237 (35%), Gaps = 37/237 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN ++VA+ T  D     VY+         ++I N         FS +G+  + S +
Sbjct: 321 AVSPNGKEVAFITRGD-----VYVTSIEY-ETTRQITNTPQQERNIDFSPDGRSLVYSAE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTL---------FINIS--ASYSPDSSQIVFESDREGKE 326
           ++    IY   L  +  ++ T                S    YSPD +++ F  +R    
Sbjct: 375 REGTWGIYESKLTRDEDKQFTYAPELKEEPLVVSGQTSFQPLYSPDGNEVAFLENRT--- 431

Query: 327 QLYVMQSNGSDQKRISQDKE-ASYFDPV----WSPQGDL--IAFTKFSG-EKFAIGVMKK 378
            L V+       + +   K   SY D      WSP      + +    G     I ++K 
Sbjct: 432 TLRVINRKTKQVRTVLDGKYLYSYSDGDQHFQWSPDSKWFLVDYISVGGWNNTDIALVKA 491

Query: 379 DGSQE-RLLVEDSNLQAPT-WSPSGRSLIFSRKKDG-------DTGSKLYSIDLNGR 426
           DGS E   L E         W   G+++I+S  + G            +Y +  +G 
Sbjct: 492 DGSGEVTNLTESGYSDGDAKWVLDGKAMIWSSDRAGFRSHGSWGAERDVYIMFFDGE 548



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 89/257 (34%), Gaps = 42/257 (16%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILR------- 238
           G     +  +  DG             +     S +  K+ Y  Y   ED  R       
Sbjct: 138 GTRFMQVYEISTDGGRPDL---YSSLYMENIALSKDGSKLLYNDYKGYEDPWRKHHQSSI 194

Query: 239 ---VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              ++L     DR+ +++  F      P ++++G       ++  + +I+  DL  N+ +
Sbjct: 195 TRDIWLCTLGKDRSFRKVTTFGGEDRNPVWAADGASFYYLSEEKGSFNIFKKDLAGNSEK 254

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK---------------- 339
           ++T      +    S +S  + +  D     ++Y ++      K                
Sbjct: 255 QITTHTTHPVRFLTSDNSGTLCYSYD----GEIYTVKEGQKPAKVNIQIVADKIENDVIH 310

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWS 398
           R+  D      D   SP G  +AF         + V   +    R +      +    +S
Sbjct: 311 RLLTDG---ATDIAVSPNGKEVAFITRGD----VYVTSIEYETTRQITNTPQQERNIDFS 363

Query: 399 PSGRSLIFSRKKDGDTG 415
           P GRSL++S +++G  G
Sbjct: 364 PDGRSLVYSAEREGTWG 380



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 7/83 (8%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKK 410
              SP G  IAF+        I  +   G + R L    ++   P WSP G+ + F+  +
Sbjct: 29  CAISPDGQTIAFSYQGD----IYTVPSSGGKARQLTTHPAHDTRPVWSPDGQKIAFASNR 84

Query: 411 DGDTGSKLYSIDLNGRNETLINT 433
            G+    ++ ++  G     + T
Sbjct: 85  SGNF--DVFLMNKEGGEPKRLTT 105



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 90/259 (34%), Gaps = 38/259 (14%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  +  +   G   R LT         P +SP+ QK+A+A+    +   V+LM+ +  
Sbjct: 41  SYQGDIYTVPSSGGKARQLTTHPAH-DTRPVWSPDGQKIAFASNRSGN-FDVFLMN-KEG 97

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI----------YSVDLQSNATERL 297
             PKR+    +      F  NG    ++    +A DI          Y +       +  
Sbjct: 98  GEPKRLTTHSTNEYPTTFKDNGHILYLANILQDAKDIQFPGTRFMQVYEISTDGGRPDLY 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-------------QD 344
           ++    NI  + S D S++++  D +G E  +      S  + I                
Sbjct: 158 SSLYMENI--ALSKDGSKLLYN-DYKGYEDPWRKHHQSSITRDIWLCTLGKDRSFRKVTT 214

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPSGR 402
                 +PVW+  G    +       F I      G+ E+ +   +      +  S +  
Sbjct: 215 FGGEDRNPVWAADGASFYYLSEEKGSFNIFKKDLAGNSEKQITTHTTHPV-RFLTSDNSG 273

Query: 403 SLIFSRKKDGDTGSKLYSI 421
           +L +S         ++Y++
Sbjct: 274 TLCYSYD------GEIYTV 286



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 53/141 (37%), Gaps = 14/141 (9%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             Q  F+P +SP+  +VA+        ++       R     K + ++       ++S +
Sbjct: 408 SGQTSFQPLYSPDGNEVAFLENRTTLRVINRKTKQVRTVLDGKYLYSYSDGDQHFQWSPD 467

Query: 269 GKRALI---SVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG 324
            K  L+   SV      DI  V          LT + + +  A +  D   +++ SDR G
Sbjct: 468 SKWFLVDYISVGGWNNTDIALVKADGSGEVTNLTESGYSDGDAKWVLDGKAMIWSSDRAG 527

Query: 325 ---------KEQLYVMQSNGS 336
                    +  +Y+M  +G 
Sbjct: 528 FRSHGSWGAERDVYIMFFDGE 548


>gi|282861616|ref|ZP_06270680.1| WD40 domain protein beta Propeller protein [Streptomyces sp. ACTE]
 gi|282563432|gb|EFB68970.1| WD40 domain protein beta Propeller protein [Streptomyces sp. ACTE]
          Length = 1069

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 55/251 (21%), Positives = 96/251 (38%), Gaps = 29/251 (11%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S     + + +  D    +VYL     D + +R+         P  S +G   +      
Sbjct: 94  SARGDLLVFTSLRDGARPQVYLRV--ADGSVRRLTRGLDAQ-HPELSPDGTTVVFDAVDA 150

Query: 280 EAMD-----IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQ 332
           +A +     +++V    +  +RLT++    +S ++SPD + I + SD +     Q+Y   
Sbjct: 151 DAAEDAPRDLWTVRTDGSGLQRLTDSAADEVSPTFSPDGTLIAYSSDSDPARGRQIYERA 210

Query: 333 SNGSDQKRISQDKEASYFDPVWSP-----QGDLIAFTKFSGEK------FAIGVMKKDGS 381
            +G  ++RIS     +  +P W+P       DL+AFT  +G          + V    G 
Sbjct: 211 LSGGPERRISDAPAGNATEPSWNPVDDDAHRDLVAFTLQTGGGPGEELEPRLWVTDGKGG 270

Query: 382 QERLLVEDSNLQ---APTWSPSGRSLIFSR---KKDGDTGSKLYSIDLN--GRNETLINT 433
              +L          +P W P G  L+F         D    +Y +     G  E L+N 
Sbjct: 271 DRAVLTGGPAEWSTKSPAWLPDGGGLLFLSPDQTCSCDPFDNVYRVGTETYGAPELLLNE 330

Query: 434 PAYASDPQWVG 444
                 P W+G
Sbjct: 331 NRAVDSPTWLG 341



 Score = 93.5 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 114/354 (32%), Gaps = 67/354 (18%)

Query: 157 TISDDIYQSITGE--------KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
            ++D   + +T            D  + +    ++  +      L  +  DG+ ++ LT 
Sbjct: 116 RVADGSVRRLTRGLDAQHPELSPDGTTVVFDAVDADAAEDAPRDLWTVRTDGSGLQRLTD 175

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSS 267
           S       P FSP+   +AY++  D    R            +RI +        P ++ 
Sbjct: 176 SAAD-EVSPTFSPDGTLIAYSSDSDPARGRQIYERALSGGPERRISDAPAGNATEPSWNP 234

Query: 268 ---NGKR--ALISVQKDEA------MDIYSVDLQSNATERLTNTLF-INI-SASYSPDSS 314
              +  R     ++Q            ++  D +      LT      +  S ++ PD  
Sbjct: 235 VDDDAHRDLVAFTLQTGGGPGEELEPRLWVTDGKGGDRAVLTGGPAEWSTKSPAWLPDGG 294

Query: 315 QIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW--SPQGDLIAFTKFS 367
            ++F S       +  + +Y + +       +  ++  +   P W        +   + S
Sbjct: 295 GLLFLSPDQTCSCDPFDNVYRVGTETYGAPELLLNENRAVDSPTWLGPAATGSVVVARTS 354

Query: 368 GEKFAIGV---MKKDGSQERLLVEDSNLQAP---------------------------TW 397
           G      +   M++DGS  R L      + P                           ++
Sbjct: 355 GASPHKALLLDMRQDGSDPRNLGMTLLQEDPASETNTDPALDPLFDPAEGFDPWTERQSY 414

Query: 398 SPSGRSLIFSRKKDGDTG--SKLYSIDLNGRNETLINTPAYAS-----DPQWVG 444
           +P GR ++ +R +D + G   +++ +D +G     +            DP +  
Sbjct: 415 TPDGRRIVVTRFEDTEAGRIQRIWLVDADGAKPEAMPLAGRGPLDRDTDPAFSP 468



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 111/356 (31%), Gaps = 84/356 (23%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL------------------------ 206
           G   +  + V+ +  +   K  L  M +DG++ R L                        
Sbjct: 341 GPAATGSVVVARTSGASPHKALLLDMRQDGSDPRNLGMTLLQEDPASETNTDPALDPLFD 400

Query: 207 -TPSRDQILFEPRFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRIGNFRS---M 259
                D       ++P+ +++    ++D     I R++L+D    +        R     
Sbjct: 401 PAEGFDPWTERQSYTPDGRRIVVTRFEDTEAGRIQRIWLVDADGAKPEAMPLAGRGPLDR 460

Query: 260 ILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATE-----RLTNTLFINISA 307
              P FS +G R   +               +   D  + A           +   +   
Sbjct: 461 DTDPAFSPDGTRIAFTRVTPGTDGDAPATARVLVADAVTGAITDEVVPPAGQSRGGDAQP 520

Query: 308 SYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKR-ISQDK-----EASYFDPVWSP 356
           ++SPD   + F  D+      G + ++   ++  D+++ ++        +     P +SP
Sbjct: 521 TWSPDGGTLAFTRDQVIGGLGGNKHVWTAPADDLDRQQDLTAAHCPGPCDVIDDSPAFSP 580

Query: 357 QGDLIAFTKFSGEKFA-----IGVMKKDGSQERLL---------------------VEDS 390
            G  +AF +  G         + V    G   +++                         
Sbjct: 581 DGLTLAFNRKDGGGRVNERTGVVVTSVTGGGCQVVLPAALRGDPGACGRTLPDTSATGPF 640

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGS--KLYSIDLNGRNETLINT--PAYASDPQW 442
             +   WSP G  L+ S ++     S   L ++DL     T + +  P    +P +
Sbjct: 641 QPRDVAWSPDGSRLLLSARRALAPNSPEALSALDLASGELTPLTSGLPGRQKEPAY 696



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 9/138 (6%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEK 370
           D+ +IVF   R  +    V  ++ S         + ++FD   S +GDL+ FT    G +
Sbjct: 54  DTGRIVFAGTRH-RSLGRVTATDNSAP--FFGTGQPTHFDQQPSARGDLLVFTSLRDGAR 110

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF---SRKKDGDTGSKLYSIDLNGRN 427
             + +   DGS  R L    + Q P  SP G +++F         D    L+++  +G  
Sbjct: 111 PQVYLRVADGS-VRRLTRGLDAQHPELSPDGTTVVFDAVDADAAEDAPRDLWTVRTDGSG 169

Query: 428 -ETLINTPAYASDPQWVG 444
            + L ++ A    P +  
Sbjct: 170 LQRLTDSAADEVSPTFSP 187


>gi|75907778|ref|YP_322074.1| ribosome assembly protein 4 [Anabaena variabilis ATCC 29413]
 gi|75701503|gb|ABA21179.1| ribosome assembly protein 4 (RSA4) [Anabaena variabilis ATCC 29413]
          Length = 1652

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 129/388 (33%), Gaps = 55/388 (14%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
            IS     + +++ D       ++  G Q+     V   G   +++    WDV   + +  
Sbjct: 1241 ISNGQLLKTLSSHDQPVYSIAYSPNGQQL-----VSVSGDKTIKI----WDVSSSQLL-- 1289

Query: 142  KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV---------------- 185
            K       S   IA        + +    GD   +I  VS S                  
Sbjct: 1290 KTLSGHSNSVYSIA---YSPDGKQLASASGDKTIKIWDVSISKPLKILSGHSDSVISIAY 1346

Query: 186  --------SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
                    SG   N + + D                +    +SPN +++A  + D     
Sbjct: 1347 SPSEKQLASGSGDNIIKIWDVSTGQTLKTLSGHSDWVRSITYSPNGKQLASGSGDK---- 1402

Query: 238  RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             + + D    +  K +   +  +++  +S +G++   S   D  + I+ V+      + L
Sbjct: 1403 TIKIWDVSTGQPVKTLLGHKDRVISVAYSPDGQQLA-SASGDTTIKIWDVN-SGQLLKTL 1460

Query: 298  TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            T       S +YSPD  Q+   SD    + + +   +     +     + S     +SP 
Sbjct: 1461 TGHSSWVRSVTYSPDGKQLASASD---DKTIKIWDISSGKLLKTLSGHQDSVKSVAYSPD 1517

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +A      +   I  +   G   + L   SN  ++  +SP G+ L  + +   D   
Sbjct: 1518 GKQLAAAS---DNIKIWDVS-SGKPLKTLTGHSNWVRSVAYSPDGQQLASASR---DNTI 1570

Query: 417  KLYSIDLNGRNETLINTPAYASDPQWVG 444
            K++ +      +TL     +     +  
Sbjct: 1571 KIWDVSSGQVLKTLTGHSDWVRSIIYSP 1598



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 103/300 (34%), Gaps = 44/300 (14%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             ++WDV   + +                H  SD +        G          + + SG
Sbjct: 1362 IKIWDVSTGQTLKTLS-----------GH--SDWVRSITYSPNG----------KQLASG 1398

Query: 188  IIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                ++ + D   G  ++ L   +D+++    +SP+ Q++A A+ D      + + D   
Sbjct: 1399 SGDKTIKIWDVSTGQPVKTLLGHKDRVISV-AYSPDGQQLASASGDT----TIKIWDVNS 1453

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             +  K +    S + +  +S +GK+   S   D+ + I+ +       + L+       S
Sbjct: 1454 GQLLKTLTGHSSWVRSVTYSPDGKQLA-SASDDKTIKIWDIS-SGKLLKTLSGHQDSVKS 1511

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +YSPD  Q+   SD      + +   +     +             +SP G  +A    
Sbjct: 1512 VAYSPDGKQLAAASD-----NIKIWDVSSGKPLKTLTGHSNWVRSVAYSPDGQQLASASR 1566

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  I +      Q    +   +    +  +SP G+ L       GD     + +D +
Sbjct: 1567 DNT---IKIWDVSSGQVLKTLTGHSDWVRSIIYSPDGKQLA---SASGDKTIIFWDLDFD 1620



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 99/278 (35%), Gaps = 23/278 (8%)

Query: 173  FNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            + S + F  +     SG    ++ + D +              +    +SP+ Q++A  +
Sbjct: 1046 WVSSVAFAPQKRQLASGSGDKTVKIWDINSGKTLKTLSGHSDSVISIAYSPDGQQLASGS 1105

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             D      + + D    +  K +      ++   +S N ++   S   D+ + I+ ++  
Sbjct: 1106 GDK----TIKIWDINSGKTLKTLSGHSDSVINIAYSPNKQQLA-SASDDKTVKIWDIN-S 1159

Query: 291  SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              + + L+       S +YSPD  ++   S     + + +   N     +          
Sbjct: 1160 GKSLKTLSGHSHAVRSVTYSPDGKRLASASR---DKTIKIWDINSGQLLKTLSGHSDGVI 1216

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIF 406
               +SP G  +A +  S +   I     D S  +LL   S+   P     +SP+G+ L+ 
Sbjct: 1217 SIAYSPDGKHLA-SASSDKTIKIW----DISNGQLLKTLSSHDQPVYSIAYSPNGQQLV- 1270

Query: 407  SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                 GD   K++ +  +   +TL           +  
Sbjct: 1271 --SVSGDKTIKIWDVSSSQLLKTLSGHSNSVYSIAYSP 1306



 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/342 (14%), Positives = 115/342 (33%), Gaps = 42/342 (12%)

Query: 108  AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            +  +++     +G            ++WD+   K +                H  SD + 
Sbjct: 1086 SDSVISIAYSPDGQQLASGSGDKTIKIWDINSGKTLKTLS-----------GH--SDSVI 1132

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                              + + S     ++ + D +              +    +SP+ 
Sbjct: 1133 NIAYSPN----------KQQLASASDDKTVKIWDINSGKSLKTLSGHSHAVRSVTYSPDG 1182

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            +++A A+ D      + + D    +  K +      +++  +S +GK    S   D+ + 
Sbjct: 1183 KRLASASRDK----TIKIWDINSGQLLKTLSGHSDGVISIAYSPDGKHLA-SASSDKTIK 1237

Query: 284  IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            I+ +       + L++      S +YSP+  Q+V  S   G + + +   + S   +   
Sbjct: 1238 IWDIS-NGQLLKTLSSHDQPVYSIAYSPNGQQLVSVS---GDKTIKIWDVSSSQLLKTLS 1293

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGR 402
                S +   +SP G  +A +    +   I  +       ++L   S+ + +  +SPS +
Sbjct: 1294 GHSNSVYSIAYSPDGKQLA-SASGDKTIKIWDVSIS-KPLKILSGHSDSVISIAYSPSEK 1351

Query: 403  SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             L       GD   K++ +      +TL     +     +  
Sbjct: 1352 QLA---SGSGDNIIKIWDVSTGQTLKTLSGHSDWVRSITYSP 1390



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 87/240 (36%), Gaps = 21/240 (8%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 +  +    F+P ++++A  + D      V + D    +  K +      +++  +
Sbjct: 1039 TLAGHENWVSSVAFAPQKRQLASGSGDK----TVKIWDINSGKTLKTLSGHSDSVISIAY 1094

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S +G++   S   D+ + I+ ++      + L+      I+ +YSP+  Q+   SD    
Sbjct: 1095 SPDGQQLA-SGSGDKTIKIWDIN-SGKTLKTLSGHSDSVINIAYSPNKQQLASASD---D 1149

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            + + +   N     +       +     +SP G  +A          I +   +  Q   
Sbjct: 1150 KTVKIWDINSGKSLKTLSGHSHAVRSVTYSPDGKRLASASRDKT---IKIWDINSGQLLK 1206

Query: 386  LVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             +   +    +  +SP G+ L  +     D   K++ I     N  L+ T +    P + 
Sbjct: 1207 TLSGHSDGVISIAYSPDGKHLASASS---DKTIKIWDIS----NGQLLKTLSSHDQPVYS 1259



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 83/258 (32%), Gaps = 36/258 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
             +          ++WDV   + +              + H   D +        G     
Sbjct: 1393 KQLASGSGDKTIKIWDVSTGQPVKTL-----------LGHK--DRVISVAYSPDG----- 1434

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 + + S     ++ + D +   +          +    +SP+ +++A A+ D    
Sbjct: 1435 -----QQLASASGDTTIKIWDVNSGQLLKTLTGHSSWVRSVTYSPDGKQLASASDDK--- 1486

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              + + D    +  K +   +  + +  +S +GK+   +    + + I+ V       + 
Sbjct: 1487 -TIKIWDISSGKLLKTLSGHQDSVKSVAYSPDGKQLAAAS---DNIKIWDVS-SGKPLKT 1541

Query: 297  LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            LT       S +YSPD  Q+   S       + +   +     +            ++SP
Sbjct: 1542 LTGHSNWVRSVAYSPDGQQLASASR---DNTIKIWDVSSGQVLKTLTGHSDWVRSIIYSP 1598

Query: 357  QGDLIAFTKFSGEKFAIG 374
             G  +A    SG+K  I 
Sbjct: 1599 DGKQLA--SASGDKTIIF 1614



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 77/222 (34%), Gaps = 38/222 (17%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ +        +  ++WDV   + +  K      +  R +  T S D            
Sbjct: 1434 GQQLASASGDTTI--KIWDVNSGQLL--KTLTGHSSWVRSV--TYSPD------------ 1475

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    + + S     ++ + D     +          +    +SP+ +++A A+ + 
Sbjct: 1476 -------GKQLASASDDKTIKIWDISSGKLLKTLSGHQDSVKSVAYSPDGKQLAAASDNI 1528

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            +      + D    +  K +    + + +  +S +G++   S  +D  + I+  D+ S  
Sbjct: 1529 K------IWDVSSGKPLKTLTGHSNWVRSVAYSPDGQQLA-SASRDNTIKIW--DVSSGQ 1579

Query: 294  -TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
              + LT       S  YSPD  Q+   S   G + +     +
Sbjct: 1580 VLKTLTGHSDWVRSIIYSPDGKQLASAS---GDKTIIFWDLD 1618


>gi|212692488|ref|ZP_03300616.1| hypothetical protein BACDOR_01984 [Bacteroides dorei DSM 17855]
 gi|212664963|gb|EEB25535.1| hypothetical protein BACDOR_01984 [Bacteroides dorei DSM 17855]
          Length = 1074

 Score =  114 bits (285), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 78/202 (38%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y   L     ++LT+ +   + A +SPD   I F    +G  +
Sbjct: 32  NGSDIVFSYAGD----LYKAPLNGGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGNTE 87

Query: 328 LYVMQSNGSDQKRISQDKEASYFDP-----------VWSPQGDLIAFTKFSGEKFA--IG 374
           +Y++ ++G + +R++     +  D             W+P G  I +     + F   + 
Sbjct: 88  VYLIPTDGGEPQRLTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGKLW 147

Query: 375 VMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSID- 422
            + K+G    +  L E       ++SP G+ L ++R            G     ++  D 
Sbjct: 148 SISKNGGMPEVIPLPEGGFC---SYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIYDP 204

Query: 423 LNGRNETLINTPAYASDPQWVG 444
              + E + N  A    P W+G
Sbjct: 205 AAKKVENITNNIAQDIIPMWIG 226



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 120/326 (36%), Gaps = 49/326 (15%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           +  +      I + I+ DI     GE+  F S                ++ V +      
Sbjct: 202 YDPAAKKVENITNNIAQDIIPMWIGEEIYFIS----------DRDRTMNIFVYNIRTKQT 251

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-- 261
             +T   D  +  P  S N Q + Y     E    +Y +D +  ++ K      S  +  
Sbjct: 252 EKVTNYTDYDVKFP--SSNGQIIVY-----EHGGYLYKLDPKTRKSEKISITLTSDNIYA 304

Query: 262 ------------APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISAS 308
                       A   S +G R +++ +     +++ +  +   T  +T T         
Sbjct: 305 RKEMKRVADNLTAASLSPDGHRLVVTARG----EVFDIPAEKGVTRDITRTPGANEREGE 360

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SP+  QI + SDR G+ ++++    G D  +++Q+ +      +WSP    I +T    
Sbjct: 361 WSPNGKQIAYISDRTGETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKKILYTDRKN 420

Query: 369 EKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               I  +      +R ++++         +SP  + + +++    +  S +Y   L   
Sbjct: 421 ---RIVEVDIASKAKRTVMQNPEGEFYEVNYSPDSQWITYTKS-GANNMSVIYVYHLTSG 476

Query: 427 NETLIN-------TPAYASDPQWVGF 445
            E  +        +P +++D +++ F
Sbjct: 477 KEYPVTEKWYSSSSPVFSTDGKYLIF 502



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 82/246 (33%), Gaps = 37/246 (15%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N   + ++     D+ +  L         +++ +     +  RFS +GK    + Q D  
Sbjct: 32  NGSDIVFSY--AGDLYKAPLN----GGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGN 85

Query: 282 MDIYSVDLQSNATERLT-------NTLFINISA-----SYSPDSSQIVFESD-REG-KEQ 327
            ++Y +       +RLT       + L   +       +++PD   IV+ +   +G   +
Sbjct: 86  TEVYLIPTDGGEPQRLTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGK 145

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----------FSGEKFAIGVM 376
           L+ +  NG   + I   +        +SP G  +A+ +             G    I + 
Sbjct: 146 LWSISKNGGMPEVIPLPEGGF---CSYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIY 202

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                +   +  + +    P W   G  + F   +D      +Y+I      +    T  
Sbjct: 203 DPAAKKVENITNNIAQDIIPMWI--GEEIYFISDRDRTMNIFVYNIRTKQTEKVTNYTDY 260

Query: 436 YASDPQ 441
               P 
Sbjct: 261 DVKFPS 266



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 98/283 (34%), Gaps = 45/283 (15%)

Query: 179 FVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           F + +    +      L     +G   + LT S        RFSP+ + +A+    D + 
Sbjct: 28  FPATNGSDIVFSYAGDLYKAPLNGGEAQKLT-SHIGYEMFARFSPDGKSIAFTGQYDGNT 86

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMI-------LAP-----RFSSNGKRALI--SVQKDEAM 282
             VYL+ T     P+R+    +         + P      ++ +GK  +    +      
Sbjct: 87  -EVYLIPTD-GGEPQRLTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDG 144

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----------DREG-KEQLYVM 331
            ++S+       E +          SYSPD  ++ +             R G  + +++ 
Sbjct: 145 KLWSISKNGGMPEVIPLPEG--GFCSYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIY 202

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--ED 389
                  + I+ +  A    P+W   G+ I F         I V      Q   +    D
Sbjct: 203 DPAAKKVENIT-NNIAQDIIPMW--IGEEIYFISDRDRTMNIFVYNIRTKQTEKVTNYTD 259

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +++ P  S +G+ +++      + G  LY +D   R    I+
Sbjct: 260 YDVKFP--SSNGQIIVY------EHGGYLYKLDPKTRKSEKIS 294



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 118/345 (34%), Gaps = 47/345 (13%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFR--LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           A  L    +  +G  RL V  R  ++D+   K +      +  A+ R+            
Sbjct: 312 ADNLTAASLSPDGH-RLVVTARGEVFDIPAEKGVTRDITRTPGANERE------------ 358

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
             GE      +I ++S+       +  + +   +G +   LT + D  + +  +SP+ +K
Sbjct: 359 --GEWSPNGKQIAYISDRTG----ETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKK 412

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDI 284
           + Y    +    R+  +D         + N         +S + +    +    +    I
Sbjct: 413 ILYTDRKN----RIVEVDIASKAKRTVMQNPEGEFYEVNYSPDSQWITYTKSGANNMSVI 468

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRIS 342
           Y   L S     +T   + + S  +S D   ++F S+R+              +    + 
Sbjct: 469 YVYHLTSGKEYPVTEKWYSSSSPVFSTDGKYLIFSSERDFNPIYSQTEWNHAYNRMGGVY 528

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFAIGVMKKDGSQERLLVEDSN 391
               A+       P  ++++  +            +     I      G   +L ++  N
Sbjct: 529 MAMLANDTPSPLLPSDEMVSIEQQTTDAANKKPEATNNTVKIDPEGLPGRLIKLPLQAGN 588

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                +   G+ + ++  ++    +K+Y  DL  + E ++   AY
Sbjct: 589 YDN--FYSDGKKVWYASGRN----TKVY--DLAKQKEEIVAEGAY 625


>gi|237709192|ref|ZP_04539673.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229456888|gb|EEO62609.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 1074

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 78/202 (38%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y   L     ++LT+ +   + A +SPD   I F    +G  +
Sbjct: 32  NGSDIVFSYAGD----LYKAPLNGGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGNTE 87

Query: 328 LYVMQSNGSDQKRISQDKEASYFDP-----------VWSPQGDLIAFTKFSGEKFA--IG 374
           +Y++ ++G + +R++     +  D             W+P G  I +     + F   + 
Sbjct: 88  VYLIPTDGGEPQRLTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGKLW 147

Query: 375 VMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSID- 422
            + K+G    +  L E       ++SP G+ L ++R            G     ++  D 
Sbjct: 148 SISKNGGMPEVIPLPEGGFC---SYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIYDP 204

Query: 423 LNGRNETLINTPAYASDPQWVG 444
              + E + N  A    P W+G
Sbjct: 205 AAKKVENITNNIAQDIIPMWIG 226



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 120/326 (36%), Gaps = 49/326 (15%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           +  +      I + I+ DI     GE+  F S                ++ V +      
Sbjct: 202 YDPAAKKVENITNNIAQDIIPMWIGEEIYFIS----------DRDRTMNIFVYNIRTKQT 251

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-- 261
             +T   D  +  P  S N Q + Y     E    +Y +D +  ++ K      S  +  
Sbjct: 252 EKVTNYTDYDVKFP--SSNGQIIVY-----EHGGYLYKLDPKTRKSEKISITLTSDNIYA 304

Query: 262 ------------APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISAS 308
                       A   S +G R +++ +     +++ +  +   T  +T T         
Sbjct: 305 RKEMKRVADNLTAASLSPDGHRLVVTARG----EVFDIPAEKGVTRDITRTPGANEREGE 360

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SP+  QI + SDR G+ ++++    G D  +++Q+ +      +WSP    I +T    
Sbjct: 361 WSPNGKQIAYISDRTGETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKKILYTDRKN 420

Query: 369 EKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               I  +      +R ++++         +SP  + + +++    +  S +Y   L   
Sbjct: 421 ---RIVEVDIASKAKRTVMQNPEGEFYEVNYSPDSQWITYTKS-GANNMSVIYVYHLTSG 476

Query: 427 NETLIN-------TPAYASDPQWVGF 445
            E  +        +P +++D +++ F
Sbjct: 477 KEYPVTEKWYSSSSPVFSTDGKYLIF 502



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 82/246 (33%), Gaps = 37/246 (15%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N   + ++     D+ +  L         +++ +     +  RFS +GK    + Q D  
Sbjct: 32  NGSDIVFSY--AGDLYKAPLN----GGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGN 85

Query: 282 MDIYSVDLQSNATERLT-------NTLFINISA-----SYSPDSSQIVFESD-REG-KEQ 327
            ++Y +       +RLT       + L   +       +++PD   IV+ +   +G   +
Sbjct: 86  TEVYLIPTDGGEPQRLTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGK 145

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----------FSGEKFAIGVM 376
           L+ +  NG   + I   +        +SP G  +A+ +             G    I + 
Sbjct: 146 LWSISKNGGMPEVIPLPEGGF---CSYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIY 202

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                +   +  + +    P W   G  + F   +D      +Y+I      +    T  
Sbjct: 203 DPAAKKVENITNNIAQDIIPMWI--GEEIYFISDRDRTMNIFVYNIRTKQTEKVTNYTDY 260

Query: 436 YASDPQ 441
               P 
Sbjct: 261 DVKFPS 266



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 98/283 (34%), Gaps = 45/283 (15%)

Query: 179 FVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           F + +    +      L     +G   + LT S        RFSP+ + +A+    D + 
Sbjct: 28  FPATNGSDIVFSYAGDLYKAPLNGGEAQKLT-SHIGYEMFARFSPDGKSIAFTGQYDGNT 86

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMI-------LAP-----RFSSNGKRALI--SVQKDEAM 282
             VYL+ T     P+R+    +         + P      ++ +GK  +    +      
Sbjct: 87  -EVYLIPTD-GGEPQRLTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDG 144

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----------DREG-KEQLYVM 331
            ++S+       E +          SYSPD  ++ +             R G  + +++ 
Sbjct: 145 KLWSISKNGGMPEVIPLPEG--GFCSYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIY 202

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--ED 389
                  + I+ +  A    P+W   G+ I F         I V      Q   +    D
Sbjct: 203 DPAAKKVENIT-NNIAQDIIPMW--IGEEIYFISDRDRTMNIFVYNIRTKQTEKVTNYTD 259

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +++ P  S +G+ +++      + G  LY +D   R    I+
Sbjct: 260 YDVKFP--SSNGQIIVY------EHGGYLYKLDPKTRKSEKIS 294



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 117/345 (33%), Gaps = 47/345 (13%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFR--LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           A  L    +  +G  RL V  R  ++D+   K +      +  A+ R+            
Sbjct: 312 ADNLTAASLSPDGH-RLVVTARGEVFDIPAEKGVTRDITRTPGANERE------------ 358

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
             GE      +I ++S+       +  + +   +G +   LT + D  + +  +SP+ +K
Sbjct: 359 --GEWSPNGKQIAYISDRTG----ETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKK 412

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDI 284
           + Y    +    R+  +D         + N         +S + +    +    +    I
Sbjct: 413 ILYTDRKN----RIVEVDIASKAKRTVMQNPEGEFYEVNYSPDSQWITYTKSGANNMSVI 468

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRIS 342
           Y   L S     +T   + + S  +S D   ++F S+R+              +    + 
Sbjct: 469 YVYHLTSGKEYPVTEKWYSSSSPVFSTDGKYLIFSSERDFNPIYSQTEWNHAYNRMGGVY 528

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFAIGVMKKDGSQERLLVEDSN 391
               A+       P  ++++  +            +     I      G   +L ++  N
Sbjct: 529 MAMLANDTPSPLLPSDEMVSIEQQTTDAANKKPEATNNTVKIDPEGLPGRLIKLPLQAGN 588

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                +   G+ + ++  +     +K+Y  DL  + E ++   AY
Sbjct: 589 YDN--FYSDGKKVWYASGRS----TKVY--DLAKQKEEIVAEGAY 625


>gi|265752719|ref|ZP_06088288.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263235905|gb|EEZ21400.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 1074

 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 78/202 (38%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y   L     ++LT+ +   + A +SPD   I F    +G  +
Sbjct: 32  NGSDIVFSYAGD----LYKAPLNGGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGNTE 87

Query: 328 LYVMQSNGSDQKRISQDKEASYFDP-----------VWSPQGDLIAFTKFSGEKFA--IG 374
           +Y++ ++G + +R++     +  D             W+P G  I +     + F   + 
Sbjct: 88  VYLIPTDGGEPQRLTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGKLW 147

Query: 375 VMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSID- 422
            + K+G    +  L E       ++SP G+ L ++R            G     ++  D 
Sbjct: 148 SISKNGGMPEVIPLPEGGFC---SYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIYDP 204

Query: 423 LNGRNETLINTPAYASDPQWVG 444
              + E + N  A    P W+G
Sbjct: 205 AAKKVENITNNIAQDIIPMWIG 226



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 120/326 (36%), Gaps = 49/326 (15%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           +  +      I + I+ DI     GE+  F S                ++ V +      
Sbjct: 202 YDPAAKKVENITNNIAQDIIPMWIGEEIYFIS----------DRDRTMNIFVYNIRTKQT 251

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-- 261
             +T   D  +  P  S N Q + Y     E    +Y +D +  ++ K      S  +  
Sbjct: 252 EKVTNYTDYDVKFP--SSNGQIIVY-----EHGGYLYKLDPKTRKSEKISITLTSDNIYA 304

Query: 262 ------------APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISAS 308
                       A   S +G R +++ +     +++ +  +   T  +T T         
Sbjct: 305 RKEMKRVADNLTAASLSPDGHRLVVTARG----EVFDIPAEKGVTRDITRTPGANEREGE 360

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SP+  QI + SDR G+ ++++    G D  +++Q+ +      +WSP    I +T    
Sbjct: 361 WSPNGKQIAYISDRTGETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKKILYTDRKN 420

Query: 369 EKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               I  +      +R ++++         +SP  + + +++    +  S +Y   L   
Sbjct: 421 ---RIVEVDIASKAKRTVMQNPEGEFYEVNYSPDSQWITYTKS-GANNMSVIYVYHLTSG 476

Query: 427 NETLIN-------TPAYASDPQWVGF 445
            E  +        +P +++D +++ F
Sbjct: 477 KEYPVTEKWYSSSSPVFSTDGKYLIF 502



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 82/246 (33%), Gaps = 37/246 (15%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N   + ++     D+ +  L         +++ +     +  RFS +GK    + Q D  
Sbjct: 32  NGSDIVFSY--AGDLYKAPLN----GGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGN 85

Query: 282 MDIYSVDLQSNATERLT-------NTLFINISA-----SYSPDSSQIVFESD-REG-KEQ 327
            ++Y +       +RLT       + L   +       +++PD   IV+ +   +G   +
Sbjct: 86  TEVYLIPTDGGEPQRLTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGK 145

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----------FSGEKFAIGVM 376
           L+ +  NG   + I   +        +SP G  +A+ +             G    I + 
Sbjct: 146 LWSISKNGGMPEVIPLPEGGF---CSYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIY 202

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                +   +  + +    P W   G  + F   +D      +Y+I      +    T  
Sbjct: 203 DPAAKKVENITNNIAQDIIPMWI--GEEIYFISDRDRTMNIFVYNIRTKQTEKVTNYTDY 260

Query: 436 YASDPQ 441
               P 
Sbjct: 261 DVKFPS 266



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 98/283 (34%), Gaps = 45/283 (15%)

Query: 179 FVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           F + +    +      L     +G   + LT S        RFSP+ + +A+    D + 
Sbjct: 28  FPATNGSDIVFSYAGDLYKAPLNGGEAQKLT-SHIGYEMFARFSPDGKSIAFTGQYDGNT 86

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMI-------LAP-----RFSSNGKRALI--SVQKDEAM 282
             VYL+ T     P+R+    +         + P      ++ +GK  +    +      
Sbjct: 87  -EVYLIPTD-GGEPQRLTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDG 144

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----------DREG-KEQLYVM 331
            ++S+       E +          SYSPD  ++ +             R G  + +++ 
Sbjct: 145 KLWSISKNGGMPEVIPLPEG--GFCSYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIY 202

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--ED 389
                  + I+ +  A    P+W   G+ I F         I V      Q   +    D
Sbjct: 203 DPAAKKVENIT-NNIAQDIIPMW--IGEEIYFISDRDRTMNIFVYNIRTKQTEKVTNYTD 259

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +++ P  S +G+ +++      + G  LY +D   R    I+
Sbjct: 260 YDVKFP--SSNGQIIVY------EHGGYLYKLDPKTRKSEKIS 294



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 117/345 (33%), Gaps = 47/345 (13%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFR--LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           A  L    +  +G  RL V  R  ++D+   K +      +  A+ R+            
Sbjct: 312 ADNLTAASLSPDGH-RLVVTARGEVFDIPAEKGVTRDITRTPGANERE------------ 358

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
             GE      +I ++S+       +  + +   +G +   LT + D  + +  +SP+ +K
Sbjct: 359 --GEWSPNGKQIAYISDRTG----ETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKK 412

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDI 284
           + Y    +    R+  +D         + N         +S + +    +    +    I
Sbjct: 413 ILYTDRKN----RIVEVDIASKAKRTVMQNPEGEFYEVNYSPDSQWITYTKSGANNMSVI 468

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRIS 342
           Y   L S     +T   + + S  +S D   ++F S+R+              +    + 
Sbjct: 469 YVYHLTSGKEYPVTEKWYSSSSPVFSTDGKYLIFSSERDFNPIYSQTEWNHAYNRMGGVY 528

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFAIGVMKKDGSQERLLVEDSN 391
               A+       P  ++++  +            +     I      G   +L ++  N
Sbjct: 529 MAMLANDTPSPLLPSDEMVSIEQQTTDAANKKPEATNNTVKIDPEGLPGRLIKLPLQAGN 588

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                +   G+ + ++  +     +K+Y  DL  + E ++   AY
Sbjct: 589 YDN--FYSDGKKVWYASGRS----TKVY--DLAKQKEEIVAEGAY 625


>gi|255010297|ref|ZP_05282423.1| putative peptidase/protease family protein [Bacteroides fragilis
           3_1_12]
          Length = 1090

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 76/220 (34%), Gaps = 34/220 (15%)

Query: 253 IGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +        +P +      S +G       + D    IY V        +LT       +
Sbjct: 12  LTTLTGNAASPLWMRDVQISPDGTEIAFCYKGD----IYKVPAGGGVATQLTTQPSYECT 67

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPDS QI F SDR G   +++M + G   +R++ +  AS     ++P G  I F+  
Sbjct: 68  PIWSPDSKQIAFASDRNGNFDIFIMPATGGTAQRLTTNS-ASELPSTFTPDGKYILFSAS 126

Query: 367 SGEKF-----------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD---- 411
             +              +  +  +G +   ++     +A  ++ SG   ++  +K     
Sbjct: 127 IQDPAQSAMFPTTAMTELYKVPSNGGRTEQVLGTP-AEAVCYATSGEFFLYQDRKGFEDE 185

Query: 412 ------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                       ++  +   G++  L N      +P    
Sbjct: 186 WRKHHTSSITRDIWMYNTKTGKHTNLTNHAGEDRNPILSP 225



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 82/238 (34%), Gaps = 33/238 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S    P +S + K+   +  +
Sbjct: 30  ISPDGTEIAFCY--KGDIYKV----PAGGGVATQLTTQPSYECTPIWSPDSKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----------- 327
           +   DI+ +       +RLT      + ++++PD   I+F +  +   Q           
Sbjct: 84  NGNFDIFIMPATGGTAQRLTTNSASELPSTFTPDGKYILFSASIQDPAQSAMFPTTAMTE 143

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY + SNG   +++     A       S  G+   +               S     I +
Sbjct: 144 LYKVPSNGGRTEQVL-GTPAEAVCYATS--GEFFLYQDRKGFEDEWRKHHTSSITRDIWM 200

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                 +   L       + P  SP G+S+    +++G      + +D     +T+ +
Sbjct: 201 YNTKTGKHTNLTNHAGEDRNPILSPDGKSVYILSEREGSFNVYNFPLDNTQSLKTVTS 258



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 104/285 (36%), Gaps = 34/285 (11%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           F   +      ++   V       +R+L+ S D  L    ++ + +   Y    +    +
Sbjct: 240 FNVYNFPLDNTQSLKTVTSFKTHPVRFLSMSHDGTLC---YAYDGE--IYTQKGNATPQK 294

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
             +   R D+       F +   +   S +GK+    V+     +++        T+++T
Sbjct: 295 TDIDIVRDDQDKIADLTFTNGATSGTVSPDGKQIAFIVRG----EVFVTSTDYATTKQIT 350

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVM-----------QSNGSDQKRISQDKEA 347
            T       +++PD+  + + S+R G  QL++             +   ++K +      
Sbjct: 351 QTPAREAGLTFAPDNRTLAYASERNGNWQLFLAKIARKEEANFPNATIIEEKVLLPSTTV 410

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSG 401
               P +SP G  +AF +       + V+  D  + R + + S   +        WSP G
Sbjct: 411 ERAYPQFSPDGKELAFIEDRN---RLMVVNLDTKKVRQITDGSTWFSTDGNFDYQWSPDG 467

Query: 402 RS--LIFSRKKDGDTGSKLYSIDLNGRNET--LINTPAYASDPQW 442
           +   L F   +  D  S +  +   G +    L N+   +  P+W
Sbjct: 468 KWFTLEFIGNRH-DPYSDIGLVSAQGGSPIINLTNSGYMSGSPRW 511



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 77/216 (35%), Gaps = 30/216 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A+    +        + +      K+I    +      F+ + +    + +
Sbjct: 320 TVSPDGKQIAFIVRGE------VFVTSTDYATTKQITQTPAREAGLTFAPDNRTLAYASE 373

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN------------ISASYSPDSSQIVFESDREGK 325
           ++    ++   +         N   I                 +SPD  ++ F  DR   
Sbjct: 374 RNGNWQLFLAKIARKEEANFPNATIIEEKVLLPSTTVERAYPQFSPDGKELAFIEDR--- 430

Query: 326 EQLYVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+  +    ++I+           FD  WSP G    + F     + +  IG++  
Sbjct: 431 NRLMVVNLDTKKVRQITDGSTWFSTDGNFDYQWSPDGKWFTLEFIGNRHDPYSDIGLVSA 490

Query: 379 DGSQERL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G    + L     +  +P W+  G +++F+ ++ G
Sbjct: 491 QGGSPIINLTNSGYMSGSPRWALDGNAILFTTERYG 526



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 103/300 (34%), Gaps = 41/300 (13%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            T      + +I F S+   +      + +M   G   + LT +         F+P+ + 
Sbjct: 66  CTPIWSPDSKQIAFASDRNGN----FDIFIMPATGGTAQRLTTNSAS-ELPSTFTPDGKY 120

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPR----FSSNGKRALISVQK 278
           + ++    +         T +    K   N      ++  P     ++++G+  L   +K
Sbjct: 121 ILFSASIQDPAQSAMFPTTAMTELYKVPSNGGRTEQVLGTPAEAVCYATSGEFFLYQDRK 180

Query: 279 DE------------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                           DI+  + ++     LTN    + +   SPD   +   S+REG  
Sbjct: 181 GFEDEWRKHHTSSITRDIWMYNTKTGKHTNLTNHAGEDRNPILSPDGKSVYILSEREGSF 240

Query: 327 QLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDL------IAFT---KFSGEKFAIGVM 376
            +Y    + +   K ++  K         S  G L        +T     + +K  I ++
Sbjct: 241 NVYNFPLDNTQSLKTVTSFKTHPVRFLSMSHDGTLCYAYDGEIYTQKGNATPQKTDIDIV 300

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPA 435
           + D  +   L   +   + T SP G+ + F  +       +++    +    + +  TPA
Sbjct: 301 RDDQDKIADLTFTNGATSGTVSPDGKQIAFIVR------GEVFVTSTDYATTKQITQTPA 354



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 76/230 (33%), Gaps = 33/230 (14%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +     ++      P +SP+ +++A+A+  + +   +++M        +R+    + 
Sbjct: 51  GGGVATQLTTQPSYECTPIWSPDSKQIAFASDRNGN-FDIFIM-PATGGTAQRLTTNSAS 108

Query: 260 ILAPRFSSNGKRALISVQKDEAMD-----------IYSVDLQSNATERLTNTLFINISAS 308
            L   F+ +GK  L S    +              +Y V      TE++  T    +   
Sbjct: 109 ELPSTFTPDGKYILFSASIQDPAQSAMFPTTAMTELYKVPSNGGRTEQVLGTPAEAV--C 166

Query: 309 YSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           Y+      +++ DR+G                +++  +       ++ +      +P+ S
Sbjct: 167 YATSGEFFLYQ-DRKGFEDEWRKHHTSSITRDIWMYNTKTGKHTNLT-NHAGEDRNPILS 224

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW---SPSGR 402
           P G  +         F +     D +Q    V         +   S  G 
Sbjct: 225 PDGKSVYILSEREGSFNVYNFPLDNTQSLKTVTSFKTHPVRFLSMSHDGT 274



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 77/366 (21%), Positives = 141/366 (38%), Gaps = 55/366 (15%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEK 170
           G V  +GK     V   ++ V        K+   +PA  R+   T + D       +   
Sbjct: 319 GTVSPDGKQIAFIVRGEVF-VTSTDYATTKQITQTPA--REAGLTFAPDNRTLAYASERN 375

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G++   +  ++    +     ++          + L PS       P+FSP+ +++A+  
Sbjct: 376 GNWQLFLAKIARKEEANFPNATII-------EEKVLLPSTTVERAYPQFSPDGKELAF-- 426

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRA---LISVQKDEAMDIY 285
            +D + L V  +DT+  R       + S       ++S +GK      I  + D   DI 
Sbjct: 427 IEDRNRLMVVNLDTKKVRQITDGSTWFSTDGNFDYQWSPDGKWFTLEFIGNRHDPYSDIG 486

Query: 286 SVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREG-----------KEQLYVMQS 333
            V  Q  +    LTN+ +++ S  ++ D + I+F ++R G              L  +  
Sbjct: 487 LVSAQGGSPIINLTNSGYMSGSPRWALDGNAILFTTERYGMRAHASWGSQNDAMLVFLNQ 546

Query: 334 NGSDQKRIS---------------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           +  D+ R+S               +DKE +  D     + D  A T+   E   I V++ 
Sbjct: 547 DAFDKFRLSKEDYELQKELEKEQQKDKEKASTDLKKDKKKDPKAETEKKDEVKTI-VVEL 605

Query: 379 DG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--T 433
           +G      RL    SNL +   S  G +L +    +G  G  L+ +DL  +   L++   
Sbjct: 606 NGLEDRIIRLTPNSSNLGSTIISKDGETLYYLSAFEG--GFDLWKMDLRKKETKLLHKMN 663

Query: 434 PAYASD 439
             +AS 
Sbjct: 664 AGWASM 669


>gi|150003723|ref|YP_001298467.1| putative exported protease [Bacteroides vulgatus ATCC 8482]
 gi|149932147|gb|ABR38845.1| putative exported protease [Bacteroides vulgatus ATCC 8482]
          Length = 1074

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 78/202 (38%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y   L     ++LT+ +   + A +SPD   I F    +G  +
Sbjct: 32  NGSDIVFSYAGD----LYKAPLNGGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGNTE 87

Query: 328 LYVMQSNGSDQKRISQDKEASYFDP-----------VWSPQGDLIAFTKFSGEKFA--IG 374
           +Y++ ++G + +R++     +  D             W+P G  I +     + F   + 
Sbjct: 88  VYLIPTDGGEPQRLTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGKLW 147

Query: 375 VMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSID- 422
            + K+G    +  L E       ++SP G+ L ++R            G     ++  D 
Sbjct: 148 SISKNGGMPEVIPLPEGGFC---SYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIYDP 204

Query: 423 LNGRNETLINTPAYASDPQWVG 444
              + E + N  A    P W+G
Sbjct: 205 AAKKVENITNNIAQDIIPMWIG 226



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 120/326 (36%), Gaps = 49/326 (15%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           +  +      I + I+ DI     GE+  F S                ++ V +      
Sbjct: 202 YDPAAKKVENITNNIAQDIIPMWIGEEIYFIS----------DRDRTMNIFVYNIRTKQT 251

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-- 261
             +T   D  +  P  S N Q + Y     E    +Y +D +  ++ K      S  +  
Sbjct: 252 EKVTNYTDYDVKFP--SSNGQIIVY-----EHGGYLYKLDPKTRKSEKISITLTSDNIYA 304

Query: 262 ------------APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISAS 308
                       A   S +G R +++ +     +++ +  +   T  +T T         
Sbjct: 305 RKEMKRVADNLTAASLSPDGHRLVVTARG----EVFDIPAEKGVTRDITRTPGANEREGE 360

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SP+  QI + SDR G+ ++++    G D  +++Q+ +      +WSP    I +T    
Sbjct: 361 WSPNGKQIAYISDRTGETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKKILYTDRKN 420

Query: 369 EKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               I  +      +R ++++         +SP  + + +++    +  S +Y   L   
Sbjct: 421 ---RIVEVDIASKAKRTVMQNPEGEFYEVNYSPDSQWITYTKS-GANNMSVIYVYHLTSG 476

Query: 427 NETLIN-------TPAYASDPQWVGF 445
            E  +        +P +++D +++ F
Sbjct: 477 KEYPVTEKWYSSSSPVFSTDGKYLIF 502



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 82/246 (33%), Gaps = 37/246 (15%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N   + ++     D+ +  L         +++ +     +  RFS +GK    + Q D  
Sbjct: 32  NGSDIVFSY--AGDLYKAPLN----GGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGN 85

Query: 282 MDIYSVDLQSNATERLT-------NTLFINISA-----SYSPDSSQIVFESD-REG-KEQ 327
            ++Y +       +RLT       + L   +       +++PD   IV+ +   +G   +
Sbjct: 86  TEVYLIPTDGGEPQRLTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGK 145

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----------FSGEKFAIGVM 376
           L+ +  NG   + I   +        +SP G  +A+ +             G    I + 
Sbjct: 146 LWSISKNGGMPEVIPLPEGGF---CSYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIY 202

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                +   +  + +    P W   G  + F   +D      +Y+I      +    T  
Sbjct: 203 DPAAKKVENITNNIAQDIIPMWI--GEEIYFISDRDRTMNIFVYNIRTKQTEKVTNYTDY 260

Query: 436 YASDPQ 441
               P 
Sbjct: 261 DVKFPS 266



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 98/283 (34%), Gaps = 45/283 (15%)

Query: 179 FVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           F + +    +      L     +G   + LT S        RFSP+ + +A+    D + 
Sbjct: 28  FPATNGSDIVFSYAGDLYKAPLNGGEAQKLT-SHIGYEMFARFSPDGKSIAFTGQYDGNT 86

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMI-------LAP-----RFSSNGKRALI--SVQKDEAM 282
             VYL+ T     P+R+    +         + P      ++ +GK  +    +      
Sbjct: 87  -EVYLIPTD-GGEPQRLTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDG 144

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----------DREG-KEQLYVM 331
            ++S+       E +          SYSPD  ++ +             R G  + +++ 
Sbjct: 145 KLWSISKNGGMPEVIPLPEG--GFCSYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIY 202

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--ED 389
                  + I+ +  A    P+W   G+ I F         I V      Q   +    D
Sbjct: 203 DPAAKKVENIT-NNIAQDIIPMW--IGEEIYFISDRDRTMNIFVYNIRTKQTEKVTNYTD 259

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +++ P  S +G+ +++      + G  LY +D   R    I+
Sbjct: 260 YDVKFP--SSNGQIIVY------EHGGYLYKLDPKTRKSEKIS 294



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 51/258 (19%), Positives = 93/258 (36%), Gaps = 22/258 (8%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           G++I          ++L D K RK + I     S     RK    ++D+    +T     
Sbjct: 269 GQIIVYEHGGYL--YKL-DPKTRKSEKISITLTSDNIYARKEMKRVADN----LTAASLS 321

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            +   L V+           +  +  +    R +T +      E  +SPN +++AY +  
Sbjct: 322 PDGHRLVVTARG-------EVFDIPAEKGVTRDITRTPGANEREGEWSPNGKQIAYISDR 374

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             +   ++L         +   N  + I    +S + K+ L +   D    I  VD+ S 
Sbjct: 375 TGET-EIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKKILYT---DRKNRIVEVDIASK 430

Query: 293 ATERLTNTL-FINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           A   +           +YSPDS  I +  S       +YV       +  ++ +K  S  
Sbjct: 431 AKRTVMQNPEGEFYEVNYSPDSQWITYTKSGANNMSVIYVYHLTSGKEYPVT-EKWYSSS 489

Query: 351 DPVWSPQGDLIAFTKFSG 368
            PV+S  G  + F+    
Sbjct: 490 SPVFSTDGKYLIFSSERD 507



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 80/222 (36%), Gaps = 26/222 (11%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFR--LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           A  L    +  +G  RL V  R  ++D+   K +      +  A+ R+            
Sbjct: 312 ADNLTAASLSPDGH-RLVVTARGEVFDIPAEKGVTRDITRTPGANERE------------ 358

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
             GE      +I ++S+       +  + +   +G +   LT + D  + +  +SP+ +K
Sbjct: 359 --GEWSPNGKQIAYISDRTG----ETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKK 412

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDI 284
           + Y    +    R+  +D         + N         +S + +    +    +    I
Sbjct: 413 ILYTDRKN----RIVEVDIASKAKRTVMQNPEGEFYEVNYSPDSQWITYTKSGANNMSVI 468

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           Y   L S     +T   + + S  +S D   ++F S+R+   
Sbjct: 469 YVYHLTSGKEYPVTEKWYSSSSPVFSTDGKYLIFSSERDFNP 510


>gi|145640335|ref|ZP_01795919.1| translocation protein TolB precursor [Haemophilus influenzae R3021]
 gi|145274921|gb|EDK14783.1| translocation protein TolB precursor [Haemophilus influenzae
           22.4-21]
          Length = 143

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 57/150 (38%), Gaps = 11/150 (7%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T+    N   ++SPD + I+F SDR G  Q+Y M +NG     +             S  
Sbjct: 2   TSGAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDANGGSVTAV-----GGRGSAQISAD 56

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  +           +           +L      ++P+ SP+G  +I+S  +    G  
Sbjct: 57  GKTLVMI---NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKV 111

Query: 418 LYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           L  +  +GR + +L  +      P W  ++
Sbjct: 112 LQLVSADGRFKASLPGSDGQVKFPAWSPYL 141



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 50/147 (34%), Gaps = 10/147 (6%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +       P +S +G   L +  +  +  +Y +D    +   +        SA  S D 
Sbjct: 2   TSGAGNNTEPAWSPDGNSILFTSDRSGSPQVYRMDANGGSVTAV----GGRGSAQISADG 57

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +V      G   +          + +S         P  SP G +I ++   G    +
Sbjct: 58  KTLVMI---NGNNNVVKQDLTTGVSEVLSTSFLGE--SPSLSPNGIMIIYSSTQGLGKVL 112

Query: 374 GVMKKDGS-QERLLVEDSNLQAPTWSP 399
            ++  DG  +  L   D  ++ P WSP
Sbjct: 113 QLVSADGRFKASLPGSDGQVKFPAWSP 139



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 63/150 (42%), Gaps = 11/150 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S      EP +SP+   + + + D     +VY MD          G       + + S
Sbjct: 1   MTSGAGNNTEPAWSPDGNSILFTS-DRSGSPQVYRMDANGGSVTAVGGRG-----SAQIS 54

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           ++GK  ++    +   ++   DL +  +E L +T F+  S S SP+   I++ S +   +
Sbjct: 55  ADGKTLVMI---NGNNNVVKQDLTTGVSEVL-STSFLGESPSLSPNGIMIIYSSTQGLGK 110

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            L ++ ++G  +  +    +     P WSP
Sbjct: 111 VLQLVSADGRFKASL-PGSDGQVKFPAWSP 139


>gi|116624547|ref|YP_826703.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227709|gb|ABJ86418.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 903

 Score =  113 bits (284), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 15/183 (8%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISAS 308
           +R+ N   +   P  S +G     +  +     +DI+   +      RLT     +   S
Sbjct: 333 RRVTNTSGLTAFPTLSRDGTLLAFASDRSDAGNLDIWIQQIGGRDPFRLTTDDADDTDPS 392

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----- 363
            SPD +++ F S+R G   +YV+ S G +   +     A    P +SP G  IA+     
Sbjct: 393 ISPDGTRVAFRSERNGG-GIYVVPSMGGEAALLVPGGRA----PRFSPDGRWIAYWAGRE 447

Query: 364 -TKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSG-RSLIFSRKKDGDTGSKLYS 420
                     + V++  G Q R L  +     +P WSP G R L  +R+   D     ++
Sbjct: 448 SESLLPGTARVFVIESGGGQPRQLGTDLGTATSPIWSPDGDRVLALARRDLSDPAPDWWT 507

Query: 421 IDL 423
           + L
Sbjct: 508 LPL 510



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/158 (25%), Positives = 68/158 (43%), Gaps = 11/158 (6%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFD 351
             R+TNT  +    + S D + + F SDR   G   +++ Q  G D  R+    +A   D
Sbjct: 332 LRRVTNTSGLTAFPTLSRDGTLLAFASDRSDAGNLDIWIQQIGGRDPFRL-TTDDADDTD 390

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           P  SP G  +AF         I V+   G +  LLV      AP +SP GR + +   ++
Sbjct: 391 PSISPDGTRVAFRSERNGG-GIYVVPSMGGEAALLVPGGR--APRFSPDGRWIAYWAGRE 447

Query: 412 GDT----GSKLYSIDLNGRNETLINTP-AYASDPQWVG 444
            ++     ++++ I+  G     + T    A+ P W  
Sbjct: 448 SESLLPGTARVFVIESGGGQPRQLGTDLGTATSPIWSP 485



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 85/250 (34%), Gaps = 31/250 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             +   +   P  S +   +A+A+   +       +     R P R+    +    P  S
Sbjct: 335 VTNTSGLTAFPTLSRDGTLLAFASDRSDAGNLDIWIQQIGGRDPFRLTTDDADDTDPSIS 394

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--- 323
            +G R     +++    IY V         L        +  +SPD   I + + RE   
Sbjct: 395 PDGTRVAFRSERNGGG-IYVVPSMGGEAALLVPGG---RAPRFSPDGRWIAYWAGRESES 450

Query: 324 ---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI---AFTKFSGEKFAIGVMK 377
              G  +++V++S G   +++  D   +   P+WSP GD +   A    S        + 
Sbjct: 451 LLPGTARVFVIESGGGQPRQLGTDL-GTATSPIWSPDGDRVLALARRDLSDPAPDWWTLP 509

Query: 378 KDGS-------------QERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                            Q R     +    P  W  SGR ++F+       G  L+ I +
Sbjct: 510 LQSGASQKTGALSALAAQRRRYTAWNTQIFPIEWRASGR-VLFAS--GPADGGNLWEIAI 566

Query: 424 NGRNETLINT 433
            G   + + T
Sbjct: 567 TGGKASGLAT 576



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 57/364 (15%), Positives = 113/364 (31%), Gaps = 93/364 (25%)

Query: 161 DIYQSITGEKGD------FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            I + +T   G            L    S  S      + +    G +   LT       
Sbjct: 330 QILRRVTNTSGLTAFPTLSRDGTLLAFASDRSDAGNLDIWIQQIGGRDPFRLTTDD-ADD 388

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            +P  SP+  +VA+ +  +     +Y++ +    A   +   R    APRFS +G+    
Sbjct: 389 TDPSISPDGTRVAFRSERNGGG--IYVVPSMGGEAALLVPGGR----APRFSPDGRWIAY 442

Query: 275 SVQKD------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE----- 323
              ++          ++ ++       +L   L    S  +SPD  +++  + R+     
Sbjct: 443 WAGRESESLLPGTARVFVIESGGGQPRQLGTDLGTATSPIWSPDGDRVLALARRDLSDPA 502

Query: 324 -------------------------------GKEQLYVM-------------QSNGSD-- 337
                                             Q++ +              ++G +  
Sbjct: 503 PDWWTLPLQSGASQKTGALSALAAQRRRYTAWNTQIFPIEWRASGRVLFASGPADGGNLW 562

Query: 338 ------------QKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD----- 379
                         +I+Q            +P    +AF+     K  I     D     
Sbjct: 563 EIAITGGKASGLATQITQGPGLQLQASTAATPDHR-MAFSNLE-WKPEIWSQAVDADRGV 620

Query: 380 --GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             G   R+ V++ +  +P+ S  GR L F R++ G T  +   +  NG+  TL+      
Sbjct: 621 ARGDVVRVTVDEPSSMSPSLSGDGRYLAFLRRQLGLTSLRSREL-ANGKEITLVTGNGAF 679

Query: 438 SDPQ 441
            +P+
Sbjct: 680 FNPR 683



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 93/301 (30%), Gaps = 57/301 (18%)

Query: 165 SITGEKGDFNSRILFVSESVVSGI-IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            I   +   + R+LF S     G   + ++      G   +       Q+      +P+ 
Sbjct: 537 QIFPIEWRASGRVLFASGPADGGNLWEIAITGGKASGLATQITQGPGLQLQASTAATPD- 595

Query: 224 QKVAYATYDDEDILRVYLMDTRID---RAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            ++A++  + +  +    +D           R+       ++P  S +G+      ++  
Sbjct: 596 HRMAFSNLEWKPEIWSQAVDADRGVARGDVVRVTVDEPSSMSPSLSGDGRYLAFLRRQLG 655

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-- 338
              + S +L +     L        +   S D S + + SD EG   L+ M   G     
Sbjct: 656 LTSLRSRELANGKEITLVTGNGAFFNPRLSGDGSTVAY-SDAEGS--LFAMPRTGGPAEK 712

Query: 339 ---------------KRISQDK------------------------EASYFDPVWSPQGD 359
                          KRIS +                         E       +SP G 
Sbjct: 713 LCSACGTVMGISADGKRISYEPIQAENLTWYDLDRKASVTAAPRPAEGVLSAGRFSPDGK 772

Query: 360 LIAFTKFSGEKFA-------IGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKD 411
            IAF   + +  +       I  +         + +  + +  P WSP+G  L +   +D
Sbjct: 773 WIAFHMRTRQSTSQIFLLPTIATLPLPRESWVPVTDGKSDELEPAWSPNGELLYYLSDRD 832

Query: 412 G 412
           G
Sbjct: 833 G 833



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 52/325 (16%), Positives = 107/325 (32%), Gaps = 76/325 (23%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV-AYATYDDEDILRVYLMDTRIDR-- 248
            + V++  G   R L          P +SP+  +V A A  D  D    +          
Sbjct: 457 RVFVIESGGGQPRQLGTDL-GTATSPIWSPDGDRVLALARRDLSDPAPDWWTLPLQSGAS 515

Query: 249 -----------APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--- 294
                        +R   + + I    + ++G+    S   D   +++ + +        
Sbjct: 516 QKTGALSALAAQRRRYTAWNTQIFPIEWRASGRVLFASGPADGG-NLWEIAITGGKASGL 574

Query: 295 -ERLTNTLFINISASYS--PDSSQIVFESDREGKEQLYVMQSNG------SDQKRISQDK 345
             ++T    + + AS +  PD  ++ F S+ E K +++    +        D  R++ D 
Sbjct: 575 ATQITQGPGLQLQASTAATPD-HRMAF-SNLEWKPEIWSQAVDADRGVARGDVVRVTVD- 631

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSL 404
           E S   P  S  G  +AF +      ++   +  +G +  L+  +     P  S  G ++
Sbjct: 632 EPSSMSPSLSGDGRYLAFLRRQLGLTSLRSRELANGKEITLVTGNGAFFNPRLSGDGSTV 691

Query: 405 IFSRK--------KDGDTGSKLYS-------IDLNGRN---------------------- 427
            +S          + G    KL S       I  +G+                       
Sbjct: 692 AYSDAEGSLFAMPRTGGPAEKLCSACGTVMGISADGKRISYEPIQAENLTWYDLDRKASV 751

Query: 428 -------ETLINTPAYASDPQWVGF 445
                  E +++   ++ D +W+ F
Sbjct: 752 TAAPRPAEGVLSAGRFSPDGKWIAF 776



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 94/263 (35%), Gaps = 43/263 (16%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +TG    FN R+     +V     + SL  M R G     L  +   ++     S + ++
Sbjct: 673 VTGNGAFFNPRLSGDGSTVAYSDAEGSLFAMPRTGGPAEKLCSACGTVMG---ISADGKR 729

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA---- 281
           ++Y     E++    L       A  R      ++ A RFS +GK     ++  ++    
Sbjct: 730 ISYEPIQAENLTWYDLDRKASVTAAPRPA--EGVLSAGRFSPDGKWIAFHMRTRQSTSQI 787

Query: 282 ---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                I ++ L   +   +T+     +  ++SP+   + + SDR+G   ++  + + +  
Sbjct: 788 FLLPTIATLPLPRESWVPVTDGKSDELEPAWSPNGELLYYLSDRDGFRCIWARRLDHTTH 847

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           +                P GD  A   F           +     + +   + L   + +
Sbjct: 848 Q----------------PSGDAFAVVHF----------HRSRRSLKRITNTTGLTGLSVA 881

Query: 399 PSGRSLIFSRKKDGDTGSKLYSI 421
             GR + FS    G+    ++ +
Sbjct: 882 -DGRMV-FS---FGELTGNIWLL 899


>gi|17225206|gb|AAL37299.1|AF323583_1 beta transducin-like protein HET-E2C*4 [Podospora anserina]
          Length = 1356

 Score =  113 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 90/266 (33%), Gaps = 19/266 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 980  QRVASGSGDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQRVASGSDDK----TIKI 1035

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             DT      + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 1036 WDTASGTCTQTLEGHGGWVQSVAFSPDGQRVA-SGSNDHTIKIW--DAASGTCTQTLEGH 1092

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   SD      + +  +      +  +    S +   +SP G  
Sbjct: 1093 GDSVWSVAFSPDGQRVASGSD---DHTIKIWDAASGTCTQTLEGHGDSVWSVAFSPDGQR 1149

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A     G    I +           +E     + +  +SP G+ +  S   DG    K+
Sbjct: 1150 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGT--IKI 1203

Query: 419  YSIDLNGRNETLINTPAYASDPQWVG 444
            +        +TL     +     +  
Sbjct: 1204 WDAASGTCTQTLEGHGGWVHSVAFSP 1229



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 93/263 (35%), Gaps = 19/263 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 854  QRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVASGSDDK----TIKI 909

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +    S +L+  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 910  WDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA-SGSGDKTIKIW--DTASGTGTQTLEGH 966

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  
Sbjct: 967  GGSVWSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQR 1023

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +A +    +   I         + L      +Q+  +SP G+ +        D   K++ 
Sbjct: 1024 VA-SGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVA---SGSNDHTIKIW- 1078

Query: 421  IDLNGRNETLINTPAYASDPQWV 443
               +  + T   T     D  W 
Sbjct: 1079 ---DAASGTCTQTLEGHGDSVWS 1098



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 87/265 (32%), Gaps = 23/265 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 896  QRVASGSDDKTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDK----TIKI 951

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             DT      + +      + +  FS +G+R   S   D+ + I+  D  S    +     
Sbjct: 952  WDTASGTGTQTLEGHGGSVWSVAFSPDGQRVA-SGSGDKTIKIW--DTASGTCTQTLEGH 1008

Query: 302  FINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              ++ S ++SPD  ++   SD    + + +  +      +  +          +SP G  
Sbjct: 1009 GNSVWSVAFSPDGQRVASGSD---DKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQR 1065

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A          I +           +E       +  +SP G+ +        D   K+
Sbjct: 1066 VA---SGSNDHTIKIWDAASGTCTQTLEGHGDSVWSVAFSPDGQRVASGSD---DHTIKI 1119

Query: 419  YSIDLNGRNETLINTPAYASDPQWV 443
            +    +  + T   T     D  W 
Sbjct: 1120 W----DAASGTCTQTLEGHGDSVWS 1140



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 81/252 (32%), Gaps = 19/252 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 1022 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSNDH----TIKI 1077

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 1078 WDAASGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSDDHTIKIW--DAASGTCTQTLEGH 1134

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   S       + +  +      +  +          +SP G  
Sbjct: 1135 GDSVWSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQR 1191

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A     G    I +           +E     + +  +SP G+ +        D   K+
Sbjct: 1192 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA---SGSSDNTIKI 1245

Query: 419  YSIDLNGRNETL 430
            +        +TL
Sbjct: 1246 WDTASGTCTQTL 1257



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 80/243 (32%), Gaps = 19/243 (7%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                     +    FSP+ Q+VA  + D      + + DT      + +      + +  
Sbjct: 835  QTLEGHGSSVLSVAFSPDGQRVASGSDDK----TIKIWDTASGTGTQTLEGHGGSVWSVA 890

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G+R   S   D+ + I+  D  S    + L       +S ++SPD  ++   S   
Sbjct: 891  FSPDGQRVA-SGSDDKTIKIW--DAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGS--- 944

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            G + + +  +      +  +    S +   +SP G  +A          I +        
Sbjct: 945  GDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVA---SGSGDKTIKIWDTASGTC 1001

Query: 384  RLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
               +E       +  +SP G+ +        D   K++        +TL     +     
Sbjct: 1002 TQTLEGHGNSVWSVAFSPDGQRVASGSD---DKTIKIWDTASGTCTQTLEGHGGWVQSVA 1058

Query: 442  WVG 444
            +  
Sbjct: 1059 FSP 1061



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 92/256 (35%), Gaps = 23/256 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQQKV--AYATYDDED 235
               I+  L  + RDG   R+    R  I   P         F+P    +   +   +   
Sbjct: 762  GHTIRGRLIAIVRDGY--RFALSYRMIIEKAPLQAYTSALVFAPTDSMIKKIFKKEEPGW 819

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            I  + +++   +   + +    S +L+  FS +G+R   S   D+ + I+  D  S    
Sbjct: 820  ISTISVVEAEWNACTQTLEGHGSSVLSVAFSPDGQRVA-SGSDDKTIKIW--DTASGTGT 876

Query: 296  R-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            + L        S ++SPD  ++   SD    + + +  +      +  +   +S     +
Sbjct: 877  QTLEGHGGSVWSVAFSPDGQRVASGSD---DKTIKIWDAASGTCTQTLEGHGSSVLSVAF 933

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            SP G  +A +    +   I         + L     ++ +  +SP G+ +       GD 
Sbjct: 934  SPDGQRVA-SGSGDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVA---SGSGDK 989

Query: 415  GSKLYSIDLNGRNETL 430
              K++        +TL
Sbjct: 990  TIKIWDTASGTCTQTL 1005



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 69/220 (31%), Gaps = 16/220 (7%)

Query: 170  KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             G +   + F    + V SG   +++ + D                ++   FSP+ Q+VA
Sbjct: 1050 HGGWVQSVAFSPDGQRVASGSNDHTIKIWDAASGTCTQTLEGHGDSVWSVAFSPDGQRVA 1109

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D      + + D       + +      + +  FS +G+R   S   D  + I+  
Sbjct: 1110 SGSDDH----TIKIWDAASGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSIDGTIKIW-- 1162

Query: 288  DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D  S    + L        S ++SPD  ++   S       + +  +      +  +   
Sbjct: 1163 DAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHG 1219

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                   +SP G  +A          I +           
Sbjct: 1220 GWVHSVAFSPDGQRVASGSSDNT---IKIWDTASGTCTQT 1256


>gi|313148096|ref|ZP_07810289.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136863|gb|EFR54223.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 1081

 Score =  113 bits (284), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 76/220 (34%), Gaps = 34/220 (15%)

Query: 253 IGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +        +P +      S +G       + D    IY V        +LT       +
Sbjct: 3   LTTLTGNAASPLWMRDVQISPDGTEIAFCYKGD----IYKVPAGGGVATQLTTQPSYECT 58

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPDS QI F SDR G   +++M + G   +R++ +  AS     ++P G  I F+  
Sbjct: 59  PIWSPDSKQIAFASDRNGNFDIFIMPATGGTAQRLTTNS-ASELPSTFTPDGKYILFSAS 117

Query: 367 SGEKF-----------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD---- 411
             +              +  +  +G +   ++     +A  ++ SG   ++  +K     
Sbjct: 118 IQDPAQSAMFPTTAMTELYKVPSNGGRTEQVLGTP-AEAVCYATSGEFFLYQDRKGFEDE 176

Query: 412 ------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                       ++  +   G++  L N      +P    
Sbjct: 177 WRKHHTSSITRDIWMYNTKTGKHTNLTNHAGEDRNPILSP 216



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 82/238 (34%), Gaps = 33/238 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S    P +S + K+   +  +
Sbjct: 21  ISPDGTEIAFCY--KGDIYKV----PAGGGVATQLTTQPSYECTPIWSPDSKQIAFASDR 74

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----------- 327
           +   DI+ +       +RLT      + ++++PD   I+F +  +   Q           
Sbjct: 75  NGNFDIFIMPATGGTAQRLTTNSASELPSTFTPDGKYILFSASIQDPAQSAMFPTTAMTE 134

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGV 375
           LY + SNG   +++     A       S  G+   +               S     I +
Sbjct: 135 LYKVPSNGGRTEQVL-GTPAEAVCYATS--GEFFLYQDRKGFEDEWRKHHTSSITRDIWM 191

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                 +   L       + P  SP G+S+    +++G      + +D     +T+ +
Sbjct: 192 YNTKTGKHTNLTNHAGEDRNPILSPDGKSVYILSEREGSFNVYNFPLDNTQSLKTVTS 249



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 104/285 (36%), Gaps = 34/285 (11%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           F   +      ++   V       +R+L+ S D  L    ++ + +   Y    +    +
Sbjct: 231 FNVYNFPLDNTQSLKTVTSFKTHPVRFLSMSHDGTLC---YAYDGE--IYTQKGNATPQK 285

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
             +   R D+       F +   +   S +GK+    V+     +++        T+++T
Sbjct: 286 TDIDIVRDDQDKIADLTFTNGATSGTVSPDGKQIAFIVRG----EVFVTSTDYATTKQIT 341

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEA 347
            T       +++PD+  + + S+R G  QL++ +               ++K +      
Sbjct: 342 QTPAREAGLTFAPDNRTLAYASERNGNWQLFLAKIARKEEANFPNATIIEEKVLLPSTTV 401

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSG 401
               P +SP G  +AF +       + V+  D  + R + + S   +        WSP G
Sbjct: 402 ERAYPQFSPDGKELAFIEDRN---RLMVVNLDTKKVRQITDGSTWFSTDGNFDYQWSPDG 458

Query: 402 RS--LIFSRKKDGDTGSKLYSIDLNGRNET--LINTPAYASDPQW 442
           +   L F   +  D  S +  +   G +    L N+   +  P+W
Sbjct: 459 KWFTLEFIGNRH-DPYSDIGLVSAQGGSPIINLTNSGYMSGSPRW 502



 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 77/216 (35%), Gaps = 30/216 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A+    +        + +      K+I    +      F+ + +    + +
Sbjct: 311 TVSPDGKQIAFIVRGE------VFVTSTDYATTKQITQTPAREAGLTFAPDNRTLAYASE 364

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN------------ISASYSPDSSQIVFESDREGK 325
           ++    ++   +         N   I                 +SPD  ++ F  DR   
Sbjct: 365 RNGNWQLFLAKIARKEEANFPNATIIEEKVLLPSTTVERAYPQFSPDGKELAFIEDR--- 421

Query: 326 EQLYVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+  +    ++I+           FD  WSP G    + F     + +  IG++  
Sbjct: 422 NRLMVVNLDTKKVRQITDGSTWFSTDGNFDYQWSPDGKWFTLEFIGNRHDPYSDIGLVSA 481

Query: 379 DGSQERL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G    + L     +  +P W+  G +++F+ ++ G
Sbjct: 482 QGGSPIINLTNSGYMSGSPRWALDGNAILFTTERYG 517



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 103/300 (34%), Gaps = 41/300 (13%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            T      + +I F S+   +      + +M   G   + LT +         F+P+ + 
Sbjct: 57  CTPIWSPDSKQIAFASDRNGN----FDIFIMPATGGTAQRLTTNSAS-ELPSTFTPDGKY 111

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPR----FSSNGKRALISVQK 278
           + ++    +         T +    K   N      ++  P     ++++G+  L   +K
Sbjct: 112 ILFSASIQDPAQSAMFPTTAMTELYKVPSNGGRTEQVLGTPAEAVCYATSGEFFLYQDRK 171

Query: 279 DE------------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                           DI+  + ++     LTN    + +   SPD   +   S+REG  
Sbjct: 172 GFEDEWRKHHTSSITRDIWMYNTKTGKHTNLTNHAGEDRNPILSPDGKSVYILSEREGSF 231

Query: 327 QLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDL------IAFT---KFSGEKFAIGVM 376
            +Y    + +   K ++  K         S  G L        +T     + +K  I ++
Sbjct: 232 NVYNFPLDNTQSLKTVTSFKTHPVRFLSMSHDGTLCYAYDGEIYTQKGNATPQKTDIDIV 291

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPA 435
           + D  +   L   +   + T SP G+ + F  +       +++    +    + +  TPA
Sbjct: 292 RDDQDKIADLTFTNGATSGTVSPDGKQIAFIVR------GEVFVTSTDYATTKQITQTPA 345



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 76/230 (33%), Gaps = 33/230 (14%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +     ++      P +SP+ +++A+A+  + +   +++M        +R+    + 
Sbjct: 42  GGGVATQLTTQPSYECTPIWSPDSKQIAFASDRNGN-FDIFIM-PATGGTAQRLTTNSAS 99

Query: 260 ILAPRFSSNGKRALISVQKDEAMD-----------IYSVDLQSNATERLTNTLFINISAS 308
            L   F+ +GK  L S    +              +Y V      TE++  T    +   
Sbjct: 100 ELPSTFTPDGKYILFSASIQDPAQSAMFPTTAMTELYKVPSNGGRTEQVLGTPAEAV--C 157

Query: 309 YSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           Y+      +++ DR+G                +++  +       ++ +      +P+ S
Sbjct: 158 YATSGEFFLYQ-DRKGFEDEWRKHHTSSITRDIWMYNTKTGKHTNLT-NHAGEDRNPILS 215

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW---SPSGR 402
           P G  +         F +     D +Q    V         +   S  G 
Sbjct: 216 PDGKSVYILSEREGSFNVYNFPLDNTQSLKTVTSFKTHPVRFLSMSHDGT 265



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 77/366 (21%), Positives = 141/366 (38%), Gaps = 55/366 (15%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEK 170
           G V  +GK     V   ++ V        K+   +PA  R+   T + D       +   
Sbjct: 310 GTVSPDGKQIAFIVRGEVF-VTSTDYATTKQITQTPA--REAGLTFAPDNRTLAYASERN 366

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G++   +  ++    +     ++          + L PS       P+FSP+ +++A+  
Sbjct: 367 GNWQLFLAKIARKEEANFPNATII-------EEKVLLPSTTVERAYPQFSPDGKELAF-- 417

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRA---LISVQKDEAMDIY 285
            +D + L V  +DT+  R       + S       ++S +GK      I  + D   DI 
Sbjct: 418 IEDRNRLMVVNLDTKKVRQITDGSTWFSTDGNFDYQWSPDGKWFTLEFIGNRHDPYSDIG 477

Query: 286 SVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREG-----------KEQLYVMQS 333
            V  Q  +    LTN+ +++ S  ++ D + I+F ++R G              L  +  
Sbjct: 478 LVSAQGGSPIINLTNSGYMSGSPRWALDGNAILFTTERYGMRAHASWGSQNDAMLVFLNQ 537

Query: 334 NGSDQKRIS---------------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           +  D+ R+S               +DKE +  D     + D  A T+   E   I V++ 
Sbjct: 538 DAFDKFRLSKEDYELQKELEKEQQKDKEKASTDLKKDKKKDPKAETEKKDEVKTI-VVEL 596

Query: 379 DG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--T 433
           +G      RL    SNL +   S  G +L +    +G  G  L+ +DL  +   L++   
Sbjct: 597 NGLEDRIIRLTPNSSNLGSTIISKDGETLYYLSAFEG--GFDLWKMDLRKKETKLLHKMN 654

Query: 434 PAYASD 439
             +AS 
Sbjct: 655 AGWASM 660


>gi|237724330|ref|ZP_04554811.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229437199|gb|EEO47276.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 1074

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 78/202 (38%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y   L     ++LT+ +   + A +SPD   I F    +G  +
Sbjct: 32  NGSDIVFSYAGD----LYKAPLNGGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGNTE 87

Query: 328 LYVMQSNGSDQKRISQDKEASYFDP-----------VWSPQGDLIAFTKFSGEKFA--IG 374
           +Y++ ++G + +R++     +  D             W+P G  I +     + F   + 
Sbjct: 88  VYLIPTDGGEPQRLTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGKLW 147

Query: 375 VMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSID- 422
            + K+G    +  L E       ++SP G+ L ++R            G     ++  D 
Sbjct: 148 SISKNGGMPEVIPLPEGGFC---SYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIYDP 204

Query: 423 LNGRNETLINTPAYASDPQWVG 444
              + E + N  A    P W+G
Sbjct: 205 AAKKVENITNNIAQNIIPMWIG 226



 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 106/274 (38%), Gaps = 44/274 (16%)

Query: 201 ANIRY-----LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            NIR      +T   D  +  P  S N Q + Y     E    +Y +D +  ++ K    
Sbjct: 244 YNIRTKQTEKVTNYTDYDVKFP--SSNGQIIVY-----EHGGYLYKLDPKTRKSEKISIT 296

Query: 256 FRSMIL--------------APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             S  +              A   S +G R +++ +     +++ +  +   T  +T T 
Sbjct: 297 LTSDNIYARKEMKRVADNLTAASLSPDGHRLVVTARG----EVFDIPAEKGVTRDITRTP 352

Query: 302 F-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   +SP+  QI + SDR G+ ++++    G D  +++Q+ +      +WSP    
Sbjct: 353 GANEREGEWSPNGKQIAYISDRTGETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKK 412

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           I +T        I  +      +R ++++         +SP  + + +++    +  S +
Sbjct: 413 ILYTDRKN---RIVEVDIASKAKRTVMQNPEGEFYEVNYSPDSQWITYTKS-GANNMSVI 468

Query: 419 YSIDLNGRNETLIN-------TPAYASDPQWVGF 445
           Y   L    E  +        +P +++D +++ F
Sbjct: 469 YVYHLTSGKEYPVTEKWYSSSSPVFSTDGKYLIF 502



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 82/246 (33%), Gaps = 37/246 (15%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N   + ++     D+ +  L         +++ +     +  RFS +GK    + Q D  
Sbjct: 32  NGSDIVFSY--AGDLYKAPLN----GGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGN 85

Query: 282 MDIYSVDLQSNATERLT-------NTLFINISA-----SYSPDSSQIVFESD-REG-KEQ 327
            ++Y +       +RLT       + L   +       +++PD   IV+ +   +G   +
Sbjct: 86  TEVYLIPTDGGEPQRLTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGK 145

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----------FSGEKFAIGVM 376
           L+ +  NG   + I   +        +SP G  +A+ +             G    I + 
Sbjct: 146 LWSISKNGGMPEVIPLPEGGF---CSYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIY 202

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                +   +  + +    P W   G  + F   +D      +Y+I      +    T  
Sbjct: 203 DPAAKKVENITNNIAQNIIPMWI--GEEIYFISDRDRTMNIFVYNIRTKQTEKVTNYTDY 260

Query: 436 YASDPQ 441
               P 
Sbjct: 261 DVKFPS 266



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 98/283 (34%), Gaps = 45/283 (15%)

Query: 179 FVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           F + +    +      L     +G   + LT S        RFSP+ + +A+    D + 
Sbjct: 28  FPATNGSDIVFSYAGDLYKAPLNGGEAQKLT-SHIGYEMFARFSPDGKSIAFTGQYDGNT 86

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMI-------LAP-----RFSSNGKRALI--SVQKDEAM 282
             VYL+ T     P+R+    +         + P      ++ +GK  +    +      
Sbjct: 87  -EVYLIPTD-GGEPQRLTYTATNNRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDG 144

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----------DREG-KEQLYVM 331
            ++S+       E +          SYSPD  ++ +             R G  + +++ 
Sbjct: 145 KLWSISKNGGMPEVIPLPEG--GFCSYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIY 202

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--ED 389
                  + I+ +   +   P+W   G+ I F         I V      Q   +    D
Sbjct: 203 DPAAKKVENITNNIAQNII-PMW--IGEEIYFISDRDRTMNIFVYNIRTKQTEKVTNYTD 259

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +++ P  S +G+ +++      + G  LY +D   R    I+
Sbjct: 260 YDVKFP--SSNGQIIVY------EHGGYLYKLDPKTRKSEKIS 294



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 117/345 (33%), Gaps = 47/345 (13%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFR--LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           A  L    +  +G  RL V  R  ++D+   K +      +  A+ R+            
Sbjct: 312 ADNLTAASLSPDGH-RLVVTARGEVFDIPAEKGVTRDITRTPGANERE------------ 358

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
             GE      +I ++S+       +  + +   +G +   LT + D  + +  +SP+ +K
Sbjct: 359 --GEWSPNGKQIAYISDRTG----ETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKK 412

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDI 284
           + Y    +    R+  +D         + N         +S + +    +    +    I
Sbjct: 413 ILYTDRKN----RIVEVDIASKAKRTVMQNPEGEFYEVNYSPDSQWITYTKSGANNMSVI 468

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRIS 342
           Y   L S     +T   + + S  +S D   ++F S+R+              +    + 
Sbjct: 469 YVYHLTSGKEYPVTEKWYSSSSPVFSTDGKYLIFSSERDFNPIYSQTEWNHAYNRMGGVY 528

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFAIGVMKKDGSQERLLVEDSN 391
               A+       P  ++++  +            +     I      G   +L ++  N
Sbjct: 529 MAMLANDTPSPLLPSDEMVSIEQQTTDAANKKPEATNNTVKIDPEGLPGRLIKLPLQAGN 588

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                +   G+ + ++  +     +K+Y  DL  + E ++   AY
Sbjct: 589 YDN--FYSDGKKVWYASGRS----TKVY--DLAKQKEEIVAEGAY 625


>gi|297161910|gb|ADI11622.1| hypothetical protein SBI_08504 [Streptomyces bingchenggensis BCW-1]
          Length = 1078

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 92/250 (36%), Gaps = 35/250 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  ++        ++  V     R   A   +         P FS +GK   I   + 
Sbjct: 77  SPSGDRLV------AEVQNVLWSLPRKGGAATALTPPDLEPTRPVFSPDGKLLAICAYRG 130

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK------EQLYVMQS 333
               ++++    +   + T+  + +   ++SPD ++I F S+R G        +++V++ 
Sbjct: 131 GGFHLWTLRPDGSDVRQRTDGPWDDRGPAWSPDGTRIAFASERGGDTVAGSPYRVWVLEV 190

Query: 334 NGSDQKRIS---------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-----GVMKKD 379
              +  R++         QD     FDP WSP G+ + F +      A+       ++ D
Sbjct: 191 ATGELTRLTGVPGQDGPLQDGVWEDFDPAWSPDGERVLFVRGRLTGAALDARTVASVRAD 250

Query: 380 GSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           GS    +          + AP+ SP G +L + R       S    +D        +   
Sbjct: 251 GSGPVAVEHTEAAAGVQVLAPSVSP-GGTLAYLRTTPAPDASCTLVVDGA---AVPVEGD 306

Query: 435 AYASDPQWVG 444
                P+W G
Sbjct: 307 VQPVPPRWTG 316



 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 54/302 (17%), Positives = 97/302 (32%), Gaps = 42/302 (13%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +   +       +    ++     +  +   D D              +  P  SP+ +
Sbjct: 329 RLVRPEAPGGGEEIPFKAALPVDRPRYRVKQYDFDSGGGARPVRG----VHLPALSPDGR 384

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKRALISVQKDEAM 282
           KVA+A  +      +++  T   R P+RI   +    +L P ++ +G+  + +  +D  +
Sbjct: 385 KVAFAALN-----SLWVAGTTGGRGPRRIVRASPTRYLLGPTWTPDGRALIYADDRDGLL 439

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++  DL S      T      +  + SP   ++    D  G   L  + +         
Sbjct: 440 AVHRRDLASGEET--TLASGGRVHPALSPAGDRLA-CIDMSGNLVLRDLAAGTERTLAAP 496

Query: 343 QDKEASYFDPVWSPQGDLIAFT-------KFSGEKFAIGVMKKDGSQERLLV-------E 388
                    P WSP G  IA+        +F      I ++       RL          
Sbjct: 497 LGGGGLPGRPSWSPDGRFIAYCDRNRLNQRFREGYNLIRIVDAGSGAARLYALAPHTSLS 556

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL------NGRNETLINTPAYASDPQW 442
           D     P WSP GR L    +      S L+ + +      +G    L    A    P W
Sbjct: 557 DRYDSGPVWSPDGRHLAVIAE------SALWLLPVRPDGTPDGEPRRLTEDSAD--HPSW 608

Query: 443 VG 444
            G
Sbjct: 609 SG 610



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 94/252 (37%), Gaps = 29/252 (11%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           L  S   +   ++N L  + R G     LTP  D     P FSP+ + +A   Y      
Sbjct: 76  LSPSGDRLVAEVQNVLWSLPRKGGAATALTP-PDLEPTRPVFSPDGKLLAICAYR-GGGF 133

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM------DIYSVDLQS 291
            ++ +        +R  +       P +S +G R   + ++           ++ +++ +
Sbjct: 134 HLWTLRPDGSDVRQR-TDGPWDDRGPAWSPDGTRIAFASERGGDTVAGSPYRVWVLEVAT 192

Query: 292 NATERLT----------NTLFINISASYSPDSSQIVFESDREGKEQL-----YVMQSNGS 336
               RLT          + ++ +   ++SPD  +++F   R     L       ++++GS
Sbjct: 193 GELTRLTGVPGQDGPLQDGVWEDFDPAWSPDGERVLFVRGRLTGAALDARTVASVRADGS 252

Query: 337 DQKRISQDKEAS---YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
               +   + A+      P  SP G  +A+ + +    A   +  DG+   +   D    
Sbjct: 253 GPVAVEHTEAAAGVQVLAPSVSPGGT-LAYLRTTPAPDASCTLVVDGAAVPV-EGDVQPV 310

Query: 394 APTWSPSGRSLI 405
            P W+  G  L+
Sbjct: 311 PPRWTGGGELLL 322



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 59/341 (17%), Positives = 105/341 (30%), Gaps = 98/341 (28%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-----ILRVYLMDTRID 247
           L  +  DG+++R  T         P +SP+  ++A+A+    D       RV++++    
Sbjct: 135 LWTLRPDGSDVRQRTDG-PWDDRGPAWSPDGTRIAFASERGGDTVAGSPYRVWVLEVATG 193

Query: 248 RAPKRIGNFRSM----------ILAPRFSSNGKRALI----------------SVQKDEA 281
               R+                   P +S +G+R L                 SV+ D +
Sbjct: 194 ELT-RLTGVPGQDGPLQDGVWEDFDPAWSPDGERVLFVRGRLTGAALDARTVASVRADGS 252

Query: 282 MDIYSVDLQ--------------SNATERLTNTLFINISASYSPDSSQIVFESD------ 321
             +     +                    L  T   + S +   D + +  E D      
Sbjct: 253 GPVAVEHTEAAAGVQVLAPSVSPGGTLAYLRTTPAPDASCTLVVDGAAVPVEGDVQPVPP 312

Query: 322 -----------REGKEQLYVMQSNGSDQ-----------------KRISQDKEASYFD-- 351
                        G+ +L   ++ G  +                 K+   D         
Sbjct: 313 RWTGGGELLLTVGGRFRLVRPEAPGGGEEIPFKAALPVDRPRYRVKQYDFDSGGGARPVR 372

Query: 352 ----PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVE---DSNLQAPTWSPSGRS 403
               P  SP G  +AF   +    ++ V    G    R +V       L  PTW+P GR+
Sbjct: 373 GVHLPALSPDGRKVAFAALN----SLWVAGTTGGRGPRRIVRASPTRYLLGPTWTPDGRA 428

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           LI++  +DG     ++  DL    ET + +      P    
Sbjct: 429 LIYADDRDG--LLAVHRRDLASGEETTLASGGRV-HPALSP 466


>gi|3023956|sp|Q00808|HETE1_PODAN RecName: Full=Vegetative incompatibility protein HET-E-1
 gi|607003|gb|AAA85775.1| beta transducin-like protein [Podospora anserina]
          Length = 1356

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 90/266 (33%), Gaps = 19/266 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG   +++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 938  QRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDK----TIKI 993

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             DT      + +      + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 994  WDTASGTCTQTLEGHGGSVWSVAFSPDGQRVA-SGSDDKTIKIW--DTASGTCTQTLEGH 1050

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S  +SPD  ++   SD      + +  +      +  +    S +   +SP G  
Sbjct: 1051 GGWVQSVVFSPDGQRVASGSD---DHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQR 1107

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A     G    I +           +E     + +  +SP G+ +  S   DG    K+
Sbjct: 1108 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGT--IKI 1161

Query: 419  YSIDLNGRNETLINTPAYASDPQWVG 444
            +        +TL     +     +  
Sbjct: 1162 WDAASGTCTQTLEGHGGWVQSVAFSP 1187



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 86/266 (32%), Gaps = 19/266 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 980  QRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDK----TIKI 1035

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             DT      + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 1036 WDTASGTCTQTLEGHGGWVQSVVFSPDGQRVA-SGSDDHTIKIW--DAVSGTCTQTLEGH 1092

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   S       + +  +      +  +          +SP G  
Sbjct: 1093 GDSVWSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQR 1149

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A     G    I +           +E     +Q+  +SP G+ +        D   K+
Sbjct: 1150 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVA---SGSSDKTIKI 1203

Query: 419  YSIDLNGRNETLINTPAYASDPQWVG 444
            +        +TL     +     +  
Sbjct: 1204 WDTASGTCTQTLEGHGGWVQSVAFSP 1229



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 92/263 (34%), Gaps = 19/263 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG    ++ + D                ++   FSP++++VA  + D      + +
Sbjct: 854  QRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDRERVASGSDDK----TIKI 909

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 910  WDAASGTCTQTLEGHGGRVQSVAFSPDGQRVA-SGSDDHTIKIW--DAASGTCTQTLEGH 966

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                +S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  
Sbjct: 967  GSSVLSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQR 1023

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +A +    +   I         + L      +Q+  +SP G+ +        D   K++ 
Sbjct: 1024 VA-SGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSD---DHTIKIWD 1079

Query: 421  IDLNGRNETLINTPAYASDPQWV 443
              ++G     +     +    W 
Sbjct: 1080 A-VSGTCTQTLEGHGDS---VWS 1098



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 83/250 (33%), Gaps = 15/250 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 1022 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDH----TIKI 1077

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 1078 WDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSIDGTIKIW--DAASGTCTQTLEGH 1134

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   S       + +  +      +  +          +SP G  
Sbjct: 1135 GGWVHSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQR 1191

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +A +  S +   I         + L      +Q+  +SP G+ +        D   K++ 
Sbjct: 1192 VA-SGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVA---SGSSDNTIKIWD 1247

Query: 421  IDLNGRNETL 430
                   +TL
Sbjct: 1248 TASGTCTQTL 1257



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 93/272 (34%), Gaps = 27/272 (9%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQQKV--AYATYDDED 235
               I+  L  + RDG   R+    R  I   P         F+P    +   +   +   
Sbjct: 762  GHTIRGRLIAIVRDGY--RFALSYRMIIEKAPLQAYTSALVFAPTDSMIKKIFKKEEPGW 819

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            I  + +++   +   + +    S +L+  FS++G+R   S   D+ + I+  D  S    
Sbjct: 820  ISTISVVEAEWNACTQTLEGHGSSVLSVAFSADGQRVA-SGSDDKTIKIW--DTASGTGT 876

Query: 296  R-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            + L        S ++SPD  ++   SD    + + +  +      +  +          +
Sbjct: 877  QTLEGHGGSVWSVAFSPDRERVASGSD---DKTIKIWDAASGTCTQTLEGHGGRVQSVAF 933

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDG 412
            SP G  +A      +   I +           +E   S++ +  +SP G+ +       G
Sbjct: 934  SPDGQRVA---SGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA---SGSG 987

Query: 413  DTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            D   K++        +TL           +  
Sbjct: 988  DKTIKIWDTASGTCTQTLEGHGGSVWSVAFSP 1019



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 78/233 (33%), Gaps = 34/233 (14%)

Query: 170  KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             G +   + F    + V SG I  ++ + D                +    FSP+ Q+VA
Sbjct: 1134 HGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVA 1193

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D      + + DT      + +      + +  FS +G+R   S   D  + I+  
Sbjct: 1194 SGSSDK----TIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVA-SGSSDNTIKIW-- 1246

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN------------- 334
            D  S    +  N        S+   +    + +   G+ Q+                   
Sbjct: 1247 DTASGTCTQTLNVGSTATCLSFDYTN---AYINTNIGRIQIATATMESLNQLSSPVCYSY 1303

Query: 335  --GSDQKRISQDKEASYFDP------VWSPQGDLIAFTKFSGEKFAIGVMKKD 379
              G D + I+ + +   + P       ++ QG  I    +SG +  I +  +D
Sbjct: 1304 GLGQDHRWITCNNQNVLWLPPEYHTSAFTMQGRKIVLGSYSG-RIIIFLFSRD 1355


>gi|154290642|ref|XP_001545913.1| hypothetical protein BC1G_15641 [Botryotinia fuckeliana B05.10]
 gi|150847472|gb|EDN22665.1| hypothetical protein BC1G_15641 [Botryotinia fuckeliana B05.10]
          Length = 674

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 103/326 (31%), Gaps = 54/326 (16%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y             ++F++    S    ++L + + DG+N R L  +     +   FSP+
Sbjct: 48  YPRAGTGAAPGKKGVMFMNRIAPS---VSTLYIANADGSNERELLGNSSSYDYHGNFSPD 104

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEA 281
            + V + T  + D               + +    S   A   S +G      S Q +  
Sbjct: 105 GKYVIFTTERNGDGQSDIYRVKVDGTGLESLVETPSFEDAGVLSPDGTTLAYVSTQGNFT 164

Query: 282 MDIYSVDLQSNATERLTNTL---FINI------SASYSPDSSQIVFESDR---------- 322
            +I+  DL +     LTNT      N         S+SPD   I F SDR          
Sbjct: 165 ANIWVKDLTTGVAFNLTNTPTTAGDNALPDGHFRPSFSPDGEWIAFSSDRNTAWTGHSNG 224

Query: 323 EGKEQ-----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVM 376
            G E      +Y ++ NGSD  ++      S   P WSP G  I F + + E  +   + 
Sbjct: 225 TGWEHTQELSVYKIRPNGSDFSQVVTKAGYSLGSPKWSPDGSRIIFYEMTRENTYNAHMT 284

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET------- 429
             D ++ ++   D              +  +         +  + D+ G N         
Sbjct: 285 SVDSAETQIASVDVATGL-------DYVYHTSGVGCKVNGQFVTADVVGFNTKGSTDDNI 337

Query: 430 -----------LINTPAYASDPQWVG 444
                               +P W  
Sbjct: 338 GINYNGTGAANYTTILGDMRNPAWSP 363



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 88/247 (35%), Gaps = 46/247 (18%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISV------QKDE 280
            T + +      + D          G    +  A  P ++++G+     +      +  E
Sbjct: 422 VTMNPDGTDLDLVFDVFSTNQTSSAGTSSGLAGAFQPSWTADGEWITFGLGYWFFERSIE 481

Query: 281 AMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGKE------QLYVM 331
              IY V    +  E+LT            SYSPD ++IV+   RE          L ++
Sbjct: 482 PGWIYRVAANGSYYEQLTFGEAGVSNAGFPSYSPDGTKIVY---RECGPAPLYCIGLRIL 538

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---------EKFAIGVMKKDGSQ 382
                    ++   +     P WSP G+ I FT+ +          + + +  +  +G+ 
Sbjct: 539 NLADGTVTNLT---DTWDNTPGWSPDGERIVFTRRNHLNFDDLSSTDSYDVYTIFPNGTG 595

Query: 383 E-RLLVEDSNLQAPTWSPSGRSLIFSRKKDG------------DTGSKLYSIDLNGRNET 429
             ++    +N     WS  GR +++S    G                ++ S++ +G N+T
Sbjct: 596 LTQVTTSGANDAHAVWSADGR-ILYSSGMYGFREESPLYDNAFQPYGQIISMNFDGSNKT 654

Query: 430 LINTPAY 436
           ++    +
Sbjct: 655 MLTDSMW 661



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 64/176 (36%), Gaps = 29/176 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQI--LFEPRFSPNQQKVAYATYDDEDILRVYLMDTR-IDRA 249
           +  +  +G+    LT     +     P +SP+  K+ Y       +  + L      D  
Sbjct: 485 IYRVAANGSYYEQLTFGEAGVSNAGFPSYSPDGTKIVYRECGPAPLYCIGLRILNLADGT 544

Query: 250 PKRIGNFRSMILAPRFSSNGKRALIS---------VQKDEAMDIYSVDLQSNATERLTNT 300
              + +       P +S +G+R + +         +   ++ D+Y++        ++T +
Sbjct: 545 VTNLTDTWDNT--PGWSPDGERIVFTRRNHLNFDDLSSTDSYDVYTIFPNGTGLTQVTTS 602

Query: 301 LFINISASYSPDSSQIVFESDREG--------------KEQLYVMQSNGSDQKRIS 342
              +  A +S D  +I++ S   G                Q+  M  +GS++  ++
Sbjct: 603 GANDAHAVWSADG-RILYSSGMYGFREESPLYDNAFQPYGQIISMNFDGSNKTMLT 657



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 95/285 (33%), Gaps = 64/285 (22%)

Query: 214 LFEPRFSPNQQKVAYAT--------------YDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            F P FSP+ + +A+++              ++    L VY +        + +      
Sbjct: 196 HFRPSFSPDGEWIAFSSDRNTAWTGHSNGTGWEHTQELSVYKIRPNGSDFSQVVTKAGYS 255

Query: 260 ILAPRFSSNGKRALI-------------SVQKDEAMDIYSVDLQSN-ATERLTNTLFINI 305
           + +P++S +G R +              +        I SVD+ +       T+ +   +
Sbjct: 256 LGSPKWSPDGSRIIFYEMTRENTYNAHMTSVDSAETQIASVDVATGLDYVYHTSGVGCKV 315

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  +   +  + F +     + + +   NG+     +        +P WSP G L+ + K
Sbjct: 316 NGQFV-TADVVGFNTKGSTDDNIGI-NYNGTGAANYTTIL-GDMRNPAWSPDGTLVIYEK 372

Query: 366 FSGEKFAIG---VMKKDGSQERLLVE-----------------DSNLQAPTWSPSGRSL- 404
              +        +   DG  E    +                   N    T +P G  L 
Sbjct: 373 TDFDPVRPMEKPLYSWDGDYEYRFTDVFPMLSKQNKLAITQKQLGNSSIVTMNPDGTDLD 432

Query: 405 ----IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
               +FS  +    G+   S  L G  +     P++ +D +W+ F
Sbjct: 433 LVFDVFSTNQTSSAGT---SSGLAGAFQ-----PSWTADGEWITF 469



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 41/127 (32%), Gaps = 24/127 (18%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDD--------EDILRVYLMDTRIDRAPKRIGNF 256
            +T   D     P +SP+ +++ +   +          D   VY +        + +   
Sbjct: 544 TVTNLTDTWDNTPGWSPDGERIVFTRRNHLNFDDLSSTDSYDVYTIFPNGTGLTQ-VTTS 602

Query: 257 RSMILAPRFSSNGKRALISVQKDEAM--------------DIYSVDLQSNATERLTNTLF 302
            +      +S++G R L S                      I S++   +    LT++++
Sbjct: 603 GANDAHAVWSADG-RILYSSGMYGFREESPLYDNAFQPYGQIISMNFDGSNKTMLTDSMW 661

Query: 303 INISASY 309
            +    Y
Sbjct: 662 EDSMPLY 668


>gi|148554692|ref|YP_001262274.1| amidohydrolase [Sphingomonas wittichii RW1]
 gi|148499882|gb|ABQ68136.1| amidohydrolase [Sphingomonas wittichii RW1]
          Length = 1014

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 82/231 (35%), Gaps = 13/231 (5%)

Query: 223 QQKVAYATYDDEDILRVYLMD-----TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
               A A   D   L + L                I         P +S +G+       
Sbjct: 37  GTNFAVAAARDGRSLAIDLQGRLWVLPATGGKATPITPVMDEARYPVWSPDGRWIAFQYY 96

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            DE   I  V    +  + +T   + +   S+ PD   I+F SDR     L+ +  +   
Sbjct: 97  TDENWHIAVVRPDGSELKVVTRGPYDDREPSWRPDGKAILFSSDRTRSLDLWQVTLDDGV 156

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           Q  ++   +A  + P  SP G   A+ + +G   ++ ++++ G    L+    ++    W
Sbjct: 157 QTSVTS-GDADDYHPAVSPDGGRTAYVQGTGRTTSL-IVEEAGKARTLVSGKLSISRLHW 214

Query: 398 SPSGRSL--IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP---QWV 443
           SP G  +  I    + GD    L+    +G+     + P     P    W+
Sbjct: 215 SPDGSRISAILFDYERGDARVALFDA-ASGKEVASHSRPGEDIFPTGASWL 264



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 53/270 (19%), Positives = 101/270 (37%), Gaps = 40/270 (14%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V   DG  IR  TP  D +   P         A+   D     +  +  T     P    
Sbjct: 270 VYGADGG-IRVWTPQGDTVAKRP------FTAAFTVQDAPVYRKREIDLTSTGDRPVL-- 320

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                IL P  S +G+    +   +    ++ + +      +LT+  F+++  ++S D  
Sbjct: 321 ----GILRPTTSPDGRHVAFTAMGN----LWMLTVGDPKPVQLTHDHFLDVDPTWSRDGQ 372

Query: 315 QIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            + + SDR   G   LY+       ++R++Q +E     P +SP G  +A    +   + 
Sbjct: 373 WLAYVSDRRGTGTMDLYLRNVATGAERRLTQTEE-DLMQPSFSPDGKSVAVFMRNSADWH 431

Query: 373 ---IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSL------IFS-RKKDGDTGSKLYSI 421
              + ++       +   +       P+WS  GR +      ++S R + GD     ++I
Sbjct: 432 GATLYLVDVATGAMKKAHDALFLPSVPSWSADGRKISVLALRVYSNRFRKGDNAF--FTI 489

Query: 422 DLN---GRNETLINTPAYASD----PQWVG 444
           DL+   G   + +   + +S     P W  
Sbjct: 490 DLDSGKGHFTSPVADRSISSRSQFGPVWSP 519



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 90/256 (35%), Gaps = 17/256 (6%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V+   G     +TP  D+    P +SP+ + +A+  Y DE+     +        
Sbjct: 56  QGRLWVLPATGGKATPITPVMDE-ARYPVWSPDGRWIAFQYYTDENWHIAVVRPD--GSE 112

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K +         P +  +GK  L S  +  ++D++ V L       +T+    +   + 
Sbjct: 113 LKVVTRGPYDDREPSWRPDGKAILFSSDRTRSLDLWQVTLDDGVQTSVTSGDADDYHPAV 172

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG- 368
           SPD  +  +     G+    +++  G  +  +S   + S     WSP G  I+   F   
Sbjct: 173 SPDGGRTAYV-QGTGRTTSLIVEEAGKARTLVS--GKLSISRLHWSPDGSRISAILFDYE 229

Query: 369 -EKFAIGVMKKDGSQER----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                + +      +E        ED      +W    R L++      D G ++++   
Sbjct: 230 RGDARVALFDAASGKEVASHSRPGEDIFPTGASWL-DARHLVY----GADGGIRVWTPQG 284

Query: 424 NGRNETLINTPAYASD 439
           +   +          D
Sbjct: 285 DTVAKRPFTAAFTVQD 300



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 88/228 (38%), Gaps = 19/228 (8%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G            +  +P +S + Q +AY +           +      A +R+      
Sbjct: 348 GDPKPVQLTHDHFLDVDPTWSRDGQWLAYVSDRRGTGTMDLYLRNVATGAERRLTQTEED 407

Query: 260 ILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           ++ P FS +GK   + ++         +Y VD+ + A ++  + LF+    S+S D  +I
Sbjct: 408 LMQPSFSPDGKSVAVFMRNSADWHGATLYLVDVATGAMKKAHDALFLPSVPSWSADGRKI 467

Query: 317 ------VFESD-REGKEQLYVMQSNGSDQKRISQDKE-----ASYFDPVWSPQGDLIAFT 364
                 V+ +  R+G    + +  +       S   +      S F PVWSP G  +A+ 
Sbjct: 468 SVLALRVYSNRFRKGDNAFFTIDLDSGKGHFTSPVADRSISSRSQFGPVWSPDGTRMAYI 527

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKK 410
              G  ++  V   D +     V+ S   A  P+WS   RSL +   +
Sbjct: 528 H-EGLLWSAAV-DADANIIEPPVQLSRDYASYPSWSGDSRSLTYLAGR 573



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 83/279 (29%), Gaps = 35/279 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +  D   ++    S D   + P  SP+  + AY          +           +
Sbjct: 146 DLWQVTLD-DGVQTSVTSGDADDYHPAVSPDGGRTAYVQGTGRTTSLI----VEEAGKAR 200

Query: 252 RIGNFRSMILAPRFSSNGKR---ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            + + +  I    +S +G R    L   ++     +   D  S       +    +I  +
Sbjct: 201 TLVSGKLSISRLHWSPDGSRISAILFDYER-GDARVALFDAASGKEVASHSRPGEDIFPT 259

Query: 309 -----------YSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRI--SQDKEASY 349
                      Y  D    V+       + R       V  +    ++ I  +   +   
Sbjct: 260 GASWLDARHLVYGADGGIRVWTPQGDTVAKRPFTAAFTVQDAPVYRKREIDLTSTGDRPV 319

Query: 350 FD---PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                P  SP G  +AFT   G  + + V        +L  +      PTWS  G+ L +
Sbjct: 320 LGILRPTTSPDGRHVAFTAM-GNLWMLTVGDP--KPVQLTHDHFLDVDPTWSRDGQWLAY 376

Query: 407 SRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
              + G     LY  ++  G    L  T      P +  
Sbjct: 377 VSDRRGTGTMDLYLRNVATGAERRLTQTEEDLMQPSFSP 415


>gi|75908402|ref|YP_322698.1| peptidase C14 [Anabaena variabilis ATCC 29413]
 gi|75702127|gb|ABA21803.1| Peptidase C14, caspase catalytic subunit p20 [Anabaena variabilis
            ATCC 29413]
          Length = 1557

 Score =  113 bits (283), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 68/336 (20%), Positives = 122/336 (36%), Gaps = 47/336 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS----------SPASWRKIAHTISDD-- 161
            GR++    D      RLWDV  +   IG+ F            SP   R ++ +  +   
Sbjct: 1079 GRIVSGSNDN---TIRLWDVNGQP--IGQPFRGHEGGVNSVAFSPDGGRIVSGSYDNTVR 1133

Query: 162  --------IYQSITGEKGDFNSRILFVSE-SVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
                    I Q   G +G  NS         +VSG   N++ + D +G  I       + 
Sbjct: 1134 LWDVNGQPIGQPFRGHEGGVNSVAFSPDGGRIVSGSNDNTIRLWDMNGQPIGQPFRGHED 1193

Query: 213  ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +++   FSP+  ++   +YD      + L D       +       M+L+  FS +G R 
Sbjct: 1194 MVYSVAFSPDGGRIVSGSYDK----TIRLWDMNGQPIGQPFRGHEDMVLSVAFSPDGGRI 1249

Query: 273  LISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            + S   D  + ++  + QS     R      +  S ++SPD  +IV  S+      + + 
Sbjct: 1250 V-SGSYDNTVRLWEANGQSIGQPFR--GHENLVNSVAFSPDGGRIVSGSN---DNTIRLW 1303

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-- 389
              NG    +  +  E   +   +SP G  I           I +   +G           
Sbjct: 1304 DVNGQPIGQPFRGHEGRVYSVAFSPDGGRIVSGSNDNT---IRLWDVNGQPIGQPFRGHE 1360

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            + + +  +SP G  ++      G   + +   D+NG
Sbjct: 1361 NLVYSVAFSPDGGRIV-----SGSWDNTIRLWDVNG 1391



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 106/321 (33%), Gaps = 46/321 (14%)

Query: 109  QVLVTGRVIKEGK----DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
             ++ +     +G            RLWD+  +   IG+ F               D +  
Sbjct: 1193 DMVYSVAFSPDGGRIVSGSYDKTIRLWDMNGQP--IGQPFRGHE-----------DMVLS 1239

Query: 165  SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                  G            +VSG   N++ + + +G +I       + ++    FSP+  
Sbjct: 1240 VAFSPDGG----------RIVSGSYDNTVRLWEANGQSIGQPFRGHENLVNSVAFSPDGG 1289

Query: 225  KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            ++   + D+     + L D       +        + +  FS +G R + S   D  + +
Sbjct: 1290 RIVSGSNDN----TIRLWDVNGQPIGQPFRGHEGRVYSVAFSPDGGRIV-SGSNDNTIRL 1344

Query: 285  YSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            + V+ Q      R      +  S ++SPD  +IV  S       + +   NG    R  +
Sbjct: 1345 WDVNGQPIGQPFR--GHENLVYSVAFSPDGGRIVSGS---WDNTIRLWDVNGQPIGRPFR 1399

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSG 401
              E   +   +SP G  I    +      I +   +G               +  +SP G
Sbjct: 1400 GHENVVYSVAFSPDGGRIVSGSWDNT---IRLWDVNGQSIGQPFRGHEDWVRSVAFSPDG 1456

Query: 402  RSLIFSRKKDGDTGSKLYSID 422
              ++       D   +L+ ++
Sbjct: 1457 GRIVSGSD---DKTLRLWDVN 1474



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 49/320 (15%), Positives = 98/320 (30%), Gaps = 48/320 (15%)

Query: 112  VTGRVIKEGKDRLRV------EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
            V   V      +  V        ++W+    + ++  +                      
Sbjct: 942  VVYSVAFSPDGKKLVIGDSKGTIQVWETFSGRVLLFLQ---------------------- 979

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
               E G  +         +VSG   N++ + D +G  I       +  +    FSP+  +
Sbjct: 980  -GHENGVKSVAFSPDGGRIVSGSNDNTIRLWDVNGQPIGQPFRGHEGGVNSVAFSPDGGR 1038

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +   + D+     + L D       +        + +  FS +G R + S   D  + ++
Sbjct: 1039 IVSGSNDN----TIRLWDVNGQPIGQPFRGHEGGVNSVAFSPDGGRIV-SGSNDNTIRLW 1093

Query: 286  SVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             V+ Q      R         S ++SPD  +IV  S       + +   NG    +  + 
Sbjct: 1094 DVNGQPIGQPFR--GHEGGVNSVAFSPDGGRIVSGSY---DNTVRLWDVNGQPIGQPFRG 1148

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGR 402
             E       +SP G  I           I +   +G               +  +SP G 
Sbjct: 1149 HEGGVNSVAFSPDGGRIVSGSNDNT---IRLWDMNGQPIGQPFRGHEDMVYSVAFSPDGG 1205

Query: 403  SLIFSRKKDGDTGSKLYSID 422
             ++       D   +L+ ++
Sbjct: 1206 RIVSGSY---DKTIRLWDMN 1222



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 53/270 (19%), Positives = 96/270 (35%), Gaps = 40/270 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            GR++    D      RLWDV  +   IG+ F                 +Y       G  
Sbjct: 1289 GRIVSGSNDN---TIRLWDVNGQP--IGQPFRGHEG-----------RVYSVAFSPDGG- 1331

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                      +VSG   N++ + D +G  I       + +++   FSP+  ++   ++D+
Sbjct: 1332 ---------RIVSGSNDNTIRLWDVNGQPIGQPFRGHENLVYSVAFSPDGGRIVSGSWDN 1382

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-N 292
                 + L D       +      +++ +  FS +G R + S   D  + ++ V+ QS  
Sbjct: 1383 ----TIRLWDVNGQPIGRPFRGHENVVYSVAFSPDGGRIV-SGSWDNTIRLWDVNGQSIG 1437

Query: 293  ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               R         S ++SPD  +IV  SD    + L +   NG    +  +  E      
Sbjct: 1438 QPFR--GHEDWVRSVAFSPDGGRIVSGSD---DKTLRLWDVNGQPIGQPFRGHEDLVRSV 1492

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             +SP G+ I    +      I +       
Sbjct: 1493 AFSPDGERIVSGSYDET---IRIWDAATGD 1519



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 85/229 (37%), Gaps = 37/229 (16%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            GR++    D      RLWDV  +   IG+ F               + +Y       G  
Sbjct: 1331 GRIVSGSNDN---TIRLWDVNGQP--IGQPFRGHE-----------NLVYSVAFSPDGG- 1373

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                      +VSG   N++ + D +G  I       + +++   FSP+  ++   ++D+
Sbjct: 1374 ---------RIVSGSWDNTIRLWDVNGQPIGRPFRGHENVVYSVAFSPDGGRIVSGSWDN 1424

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-N 292
                 + L D       +        + +  FS +G R + S   D+ + ++ V+ Q   
Sbjct: 1425 ----TIRLWDVNGQSIGQPFRGHEDWVRSVAFSPDGGRIV-SGSDDKTLRLWDVNGQPIG 1479

Query: 293  ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
               R      +  S ++SPD  +IV  S     E + +  +   D  R+
Sbjct: 1480 QPFR--GHEDLVRSVAFSPDGERIVSGSY---DETIRIWDAATGDCLRV 1523



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 75/256 (29%), Gaps = 16/256 (6%)

Query: 191  NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             +   +   G N+  L   R+    E     +         +  +    ++     +   
Sbjct: 877  KTQAQVGYIGGNLVKLLIERNPYSLENC---DLSNTVIPDVNFANASFRWVNLMGTNLTN 933

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                    ++ +  FS +GK+ +I   K   + ++           L        S ++S
Sbjct: 934  SVFAPVLGVVYSVAFSPDGKKLVIGDSK-GTIQVWET-FSGRVLLFLQGHENGVKSVAFS 991

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            PD  +IV  S+      + +   NG    +  +  E       +SP G  I         
Sbjct: 992  PDGGRIVSGSN---DNTIRLWDVNGQPIGQPFRGHEGGVNSVAFSPDGGRIVSGSNDNT- 1047

Query: 371  FAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              I +   +G             + +  +SP G  ++       D   +L+ ++     +
Sbjct: 1048 --IRLWDVNGQPIGQPFRGHEGGVNSVAFSPDGGRIV---SGSNDNTIRLWDVNGQPIGQ 1102

Query: 429  TLINTPAYASDPQWVG 444
                     +   +  
Sbjct: 1103 PFRGHEGGVNSVAFSP 1118


>gi|298249795|ref|ZP_06973599.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297547799|gb|EFH81666.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 703

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 54/259 (20%), Positives = 99/259 (38%), Gaps = 38/259 (14%)

Query: 217 PRFSPNQQKVAYATYD-----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  SP+ ++VAY  +       +   R++L+DT+        GN +S   A  +S +GK 
Sbjct: 92  PAISPDGRQVAYTLWSFEGEQQKRSGRIWLVDTQGGEPVPFGGNNKSEWGA-SWSPDGKE 150

Query: 272 ALISVQKDEA---MDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREG--- 324
               +  D       ++   L   +  R   ++   +    +SPD S I F + R G   
Sbjct: 151 LAF-MALDGEPELPQLFVRALDGKSKARRICSMSRGLEEPIWSPDGSHIGFLA-RTGQEP 208

Query: 325 -----------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---- 369
                       ++L+ +  +G   + ++Q+   + ++  WSP G  +A    +G     
Sbjct: 209 DKDPLVLAPASHQRLWAVHRHGDTPRPLTQE-NITVWEYAWSPDGKHVAIYYSTGPDDTD 267

Query: 370 --KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR---KKDGDTGSKLYSIDL 423
             +  IG++   G   R L +         WSP G  L +           G  ++ I++
Sbjct: 268 WYRGQIGIVSIQGGAVRQLTKLARQASGLAWSPDGTRLAYISGEWSDPCRGGGDIFVINV 327

Query: 424 NGRNETLINTPAYASDPQW 442
            G     + TP     P W
Sbjct: 328 AGGEARNL-TPGIDCSPGW 345



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 91/266 (34%), Gaps = 29/266 (10%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRV 239
           S           + ++D  G          ++  +   +SP+ +++A+   D E  + ++
Sbjct: 107 SFEGEQQKRSGRIWLVDTQGGEP-VPFGGNNKSEWGASWSPDGKELAFMALDGEPELPQL 165

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-------------IYS 286
           ++         +RI +    +  P +S +G       +  +  D             +++
Sbjct: 166 FVRALDGKSKARRICSMSRGLEEPIWSPDGSHIGFLARTGQEPDKDPLVLAPASHQRLWA 225

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIV-FES----DREG-KEQLYVMQSNGSDQKR 340
           V    +    LT         ++SPD   +  + S    D +  + Q+ ++   G   ++
Sbjct: 226 VHRHGDTPRPLTQENITVWEYAWSPDGKHVAIYYSTGPDDTDWYRGQIGIVSIQGGAVRQ 285

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVEDSNLQ-- 393
           +++    +     WSP G  +A+              I V+   G + R L    +    
Sbjct: 286 LTKLARQA-SGLAWSPDGTRLAYISGEWSDPCRGGGDIFVINVAGGEARNLTPGIDCSPG 344

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLY 419
              W P G  L+++     +    L 
Sbjct: 345 WCRWLPEGEQLLYAGWYGANAQLGLI 370



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 93/268 (34%), Gaps = 30/268 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-----------LRVY 240
            L V   DG +      S  + L EP +SP+   + +     ++             +  
Sbjct: 164 QLFVRALDGKSKARRICSMSRGLEEPIWSPDGSHIGFLARTGQEPDKDPLVLAPASHQRL 223

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--ISVQKDEAMD----IYSVDLQSNAT 294
               R    P+ +      +    +S +GK      S   D+       I  V +Q  A 
Sbjct: 224 WAVHRHGDTPRPLTQENITVWEYAWSPDGKHVAIYYSTGPDDTDWYRGQIGIVSIQGGAV 283

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKRISQDKEASY 349
            +LT         ++SPD +++ + S        G   ++V+   G + + ++   + S 
Sbjct: 284 RQLTKLARQASGLAWSPDGTRLAYISGEWSDPCRGGGDIFVINVAGGEARNLTPGIDCSP 343

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-------APTWSPSGR 402
               W P+G+ + +  + G    +G++ +      LL  ++           P  S   +
Sbjct: 344 GWCRWLPEGEQLLYAGWYGANAQLGLINEQDGAITLLERENRECILDLSIGFPGVSADLK 403

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            L+ S +       +++  D+      L
Sbjct: 404 HLV-SVRSSSTQPYEVWLADIAQETAQL 430



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 72/210 (34%), Gaps = 27/210 (12%)

Query: 262 APRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            P  S +G++   ++      Q+  +  I+ VD Q                AS+SPD  +
Sbjct: 91  TPAISPDGRQVAYTLWSFEGEQQKRSGRIWLVDTQGGEPVPFGGNNKSEWGASWSPDGKE 150

Query: 316 IVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG----- 368
           + F +        QL+V   +G  + R          +P+WSP G  I F   +G     
Sbjct: 151 LAFMALDGEPELPQLFVRALDGKSKARRICSMSRGLEEPIWSPDGSHIGFLARTGQEPDK 210

Query: 369 --------EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRS--LIFSRKKDGD--TG 415
                       +  + + G   R L  E+  +    WSP G+   + +S   D      
Sbjct: 211 DPLVLAPASHQRLWAVHRHGDTPRPLTQENITVWEYAWSPDGKHVAIYYSTGPDDTDWYR 270

Query: 416 SKLYSIDLNGRNETLINTPAYASDP-QWVG 444
            ++  + + G     +   A  +    W  
Sbjct: 271 GQIGIVSIQGGAVRQLTKLARQASGLAWSP 300



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 99/295 (33%), Gaps = 50/295 (16%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI--- 246
              L  + R G   R LT   +  ++E  +SP+ + VA       D    Y     I   
Sbjct: 220 HQRLWAVHRHGDTPRPLTQ-ENITVWEYAWSPDGKHVAIYYSTGPDDTDWYRGQIGIVSI 278

Query: 247 -DRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-----EAMDIYSVDLQSNATERLTNT 300
              A +++           +S +G R      +         DI+ +++       LT  
Sbjct: 279 QGGAVRQLTKLARQASGLAWSPDGTRLAYISGEWSDPCRGGGDIFVINVAGGEARNLT-- 336

Query: 301 LFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-----EASYFDP 352
             I+ S     + P+  Q+++        QL ++         + ++      + S   P
Sbjct: 337 PGIDCSPGWCRWLPEGEQLLYAGWYGANAQLGLINEQDGAITLLERENRECILDLSIGFP 396

Query: 353 VWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERL----------LVEDSNLQAPT----W 397
             S     +   + S  + + + +        +L          L E++   +P+    +
Sbjct: 397 GVSADLKHLVSVRSSSTQPYEVWLADIAQETAQLAWRRLTHVNKLQEETLALSPSQEIRY 456

Query: 398 -SPSGRSLIFSRKK-----DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            S  G  LI +         GD+   LY ++++G        P++A    W  F+
Sbjct: 457 PSVDG-WLIDAIYTPPPHWSGDSLPPLY-VEVHG-------GPSWARQHSWSPFV 502


>gi|239826379|ref|YP_002949003.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. WCH70]
 gi|239806672|gb|ACS23737.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. WCH70]
          Length = 670

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 85/234 (36%), Gaps = 53/234 (22%)

Query: 263 PRFSSNGKRALISV-----QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           P+FS +G++ +        +++    ++ + L      + T     +    +SPD   I 
Sbjct: 27  PQFSPDGEKVIFVQKTIDDEREYRSHLFLLTLADGKVNQWTFGKVKDAFPRWSPDGKTIA 86

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTK----------- 365
           F S+R GK Q++++ ++G + ++++  K        WSP G  L+A T            
Sbjct: 87  FLSNRSGKTQIWLLPTDGGEARQLTALKNG-VRHLRWSPDGRFLVALTSLGKKETLEERE 145

Query: 366 -----------------------------FSGEKFAIGVMKKDGSQERLLVE-DSNLQAP 395
                                           ++  +  +  +  + + L + D  + + 
Sbjct: 146 EQNKKEKEKRELTPLVVERLQYKSDAAGFRDDKQDVLIRINVETGEIQSLTDRDDEIGSF 205

Query: 396 TWSPSGRSLIFSRKKDGD----TGSKLYSIDLN-GRNETLINTPAYASDPQWVG 444
             SP G+++ F   +  +        ++ +D++ G+   + +     +   W  
Sbjct: 206 AISPDGKTVAFVANRSNEPDFTFTRDIFLLDIDSGKTTKVTDGNGLFTSLSWSP 259



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/356 (13%), Positives = 113/356 (31%), Gaps = 79/356 (22%)

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           + +  K    +     +I     +D   S  GEK  F  + +       S +   +L   
Sbjct: 4   QDVKKKLRVITAEDLFRI--RFVNDPQFSPDGEKVIFVQKTIDDEREYRSHLFLLTL--- 58

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
             DG   ++           PR+SP+ + +A+ +       +++L+ T      +++   
Sbjct: 59  -ADGKVNQWTF--GKVKDAFPRWSPDGKTIAFLSNRSGKT-QIWLLPTD-GGEARQLTAL 113

Query: 257 RSMILAPRFSSNGKRA-----------------------------------------LIS 275
           ++ +   R+S +G+                                              
Sbjct: 114 KNGVRHLRWSPDGRFLVALTSLGKKETLEEREEQNKKEKEKRELTPLVVERLQYKSDAAG 173

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------QLY 329
            + D+   +  +++++   + LT+      S + SPD   + F ++R  +        ++
Sbjct: 174 FRDDKQDVLIRINVETGEIQSLTDRDDEIGSFAISPDGKTVAFVANRSNEPDFTFTRDIF 233

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQER 384
           ++  +     +++ D    +    WSP G  +A               + +      ++R
Sbjct: 234 LLDIDSGKTTKVT-DGNGLFTSLSWSPDGKTLAAIGHDLKYLGATLNRVWIFDLVSGEKR 292

Query: 385 LLVEDSNLQ------------APT----WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            L  D ++             AP+    W   G  + F   + G       ++D  
Sbjct: 293 ALTADWDVHVGDAMVGDMHSDAPSPGLIWDKEGNGVYFLASERGRVNLHHVALDGT 348



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 99/312 (31%), Gaps = 67/312 (21%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE------------- 234
             K  + ++  DG   R LT  ++ +    R+SP+ + +   T   +             
Sbjct: 92  SGKTQIWLLPTDGGEARQLTALKNGVRHL-RWSPDGRFLVALTSLGKKETLEEREEQNKK 150

Query: 235 --------------------------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                                     D   V +         + + +    I +   S +
Sbjct: 151 EKEKRELTPLVVERLQYKSDAAGFRDDKQDVLIRINVETGEIQSLTDRDDEIGSFAISPD 210

Query: 269 GKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD- 321
           GK       +    D      I+ +D+ S  T ++T+   +  S S+SPD   +      
Sbjct: 211 GKTVAFVANRSNEPDFTFTRDIFLLDIDSGKTTKVTDGNGLFTSLSWSPDGKTLAAIGHD 270

Query: 322 ----REGKEQLYVMQSNGSDQKRISQDKE--------ASYFDPVWSP------QGDLIAF 363
                    ++++      +++ ++ D +                SP      +G+ + F
Sbjct: 271 LKYLGATLNRVWIFDLVSGEKRALTADWDVHVGDAMVGDMHSDAPSPGLIWDKEGNGVYF 330

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 +  +  +  DG+    +V D +L   T  P  + +  +   +      LY++ L
Sbjct: 331 LASERGRVNLHHVALDGTITPSVVGDFHLYGLTIHP-HQHIAIAAISEPTHIGDLYTVSL 389

Query: 424 -NGRNETLINTP 434
            +G+   L N  
Sbjct: 390 HDGKRNKLTNAN 401



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 35/102 (34%), Gaps = 9/102 (8%)

Query: 350 FDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
            DP +SP G+ + F +               +   DG   +          P WSP G++
Sbjct: 25  NDPQFSPDGEKVIFVQKTIDDEREYRSHLFLLTLADGKVNQWTFGKVKDAFPRWSPDGKT 84

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
           + F   + G T  +++ +  +G     L          +W  
Sbjct: 85  IAFLSNRSGKT--QIWLLPTDGGEARQLTALKNGVRHLRWSP 124


>gi|116625893|ref|YP_828049.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229055|gb|ABJ87764.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 898

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 57/312 (18%), Positives = 116/312 (37%), Gaps = 21/312 (6%)

Query: 140 IGKKFFSSPASWRKIAHT-ISDDIYQSITGEKGDF------NSRILFVSESVVS-GIIKN 191
           +G   F+ P   R++  T  +  I + +    G        +  + FV   V + G ++N
Sbjct: 536 VGGVLFAVPFDPRRLEKTGSAVGIVEGVLRGNGVGQYAFSNSGTLAFVPGPVFTLGAVEN 595

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++DR G                PR S + +++ Y   DD     +++++     AP+
Sbjct: 596 VLALVDRRGEVEPLKVVPAGFA--FPRASSDGKRIVY-QIDDGKEAGIWILELGGGTAPR 652

Query: 252 RIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTN-TLFINISA- 307
           R+          P +SS+G++      ++  + I+      ++  ERLT     +     
Sbjct: 653 RLTLPGNGGNRFPIWSSDGQQVAFQSDREADLGIWWQRADGSSAAERLTKPGPGVTHVPD 712

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SPD     F   ++   +++            +          V+SP G  +A+   +
Sbjct: 713 SWSPDGQTFSFTEQKDKSAEIWTYSMRERKAAVFAAVPGGILGRSVFSPDGKWVAYQVDA 772

Query: 368 GEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                + V      +   +   D +   P WSP G+ LI+         S++ S+ ++  
Sbjct: 773 QPNSRVYVRPFPPTATAYVAPADGDTHHPVWSPDGKELIYVA-----GPSQVGSMSISTH 827

Query: 427 NETLINTPAYAS 438
                 +P  A 
Sbjct: 828 PSVSFGSPVRAP 839



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 56/321 (17%), Positives = 108/321 (33%), Gaps = 71/321 (22%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA------------------TYDDE 234
           L V    G   + + P  ++++ EP+  P  + + Y+                    + +
Sbjct: 451 LRVSANGGKPEQLIVPKNNEMMLEPQTLPGGETILYSLVESTRRGTPSWDKGLVIAQNLK 510

Query: 235 DILRVYLMDTRIDRA---------------------PKRIGNFRSMILAP---------- 263
              R  L+   +D                       P+R+    S +             
Sbjct: 511 SGARKTLVQDGLDARYVPTGHLAYTVGGVLFAVPFDPRRLEKTGSAVGIVEGVLRGNGVG 570

Query: 264 --RFSSNGKRA-----LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              FS++G  A     + ++   E + +  VD +    E L            S D  +I
Sbjct: 571 QYAFSNSGTLAFVPGPVFTLGAVENV-LALVDRRG-EVEPLKVVPAGFAFPRASSDGKRI 628

Query: 317 VFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           V++ D   +  +++++  G    +R++         P+WS  G  +AF         I  
Sbjct: 629 VYQIDDGKEAGIWILELGGGTAPRRLTLPGNGGNRFPIWSSDGQQVAFQSDREADLGIWW 688

Query: 376 MKKDGSQ--ERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            + DGS   ERL      +     +WSP G++  F+ +KD       YS+    +     
Sbjct: 689 QRADGSSAAERLTKPGPGVTHVPDSWSPDGQTFSFTEQKDKSAEIWTYSMR-ERKAAVFA 747

Query: 432 NTPA-------YASDPQWVGF 445
             P        ++ D +WV +
Sbjct: 748 AVPGGILGRSVFSPDGKWVAY 768



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 82/231 (35%), Gaps = 31/231 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  ++ Y    +  + R  + D      P   G   + I +P FS +GK      Q  
Sbjct: 353 SPDGTQMVYVA--NGRLYRRSMADLEARPIPGAYG-GGTAIRSPVFSPDGKSVAYHDQMS 409

Query: 280 EAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            ++   ++D    A   LT   L   +  S+      IVF +  EG   +  + +NG   
Sbjct: 410 NSLKRIALD--GGAP--LTICPLQTQLGMSWGEQG--IVFATLAEG---ILRVSANGGKP 460

Query: 339 KRISQDKEASYF-DPVWSPQGDLIAF-----TKFSGEKFAIGV---MKKDGSQERLLVED 389
           +++   K      +P   P G+ I +     T+     +  G+           + LV+D
Sbjct: 461 EQLIVPKNNEMMLEPQTLPGGETILYSLVESTRRGTPSWDKGLVIAQNLKSGARKTLVQD 520

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                    P+G  L ++       G  L+++  + R      +     + 
Sbjct: 521 GLDARYV--PTG-HLAYT------VGGVLFAVPFDPRRLEKTGSAVGIVEG 562



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 58/188 (30%), Gaps = 26/188 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFES 320
             S +G + +          +Y   +       +           S  +SPD   + +  
Sbjct: 351 TLSPDGTQMVYVA----NGRLYRRSMADLEARPIPGAYGGGTAIRSPVFSPDGKSVAYHD 406

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  L  +  +G     ++     +     W  QG  I F   +     I  +  +G
Sbjct: 407 QMS--NSLKRIALDGGAP--LTICPLQTQLGMSWGEQG--IVFATLAEG---ILRVSANG 457

Query: 381 SQERLLVEDSNLQ---APTWSPSGRSLIFS---RKKDG----DTGSKLYSIDLNGRNETL 430
            +   L+   N +    P   P G ++++S     + G    D G  +     +G  +TL
Sbjct: 458 GKPEQLIVPKNNEMMLEPQTLPGGETILYSLVESTRRGTPSWDKGLVIAQNLKSGARKTL 517

Query: 431 INTPAYAS 438
           +     A 
Sbjct: 518 VQDGLDAR 525



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 81/299 (27%), Gaps = 79/299 (26%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSMILAPRF 265
                +  P FSP+ + VAY       + R+ L       I     ++G           
Sbjct: 385 GGGTAIRSPVFSPDGKSVAYHDQMSNSLKRIALDGGAPLTICPLQTQLGMSWGEQG---- 440

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFE---S 320
                  + +   +    I  V       E+L       +       P    I++    S
Sbjct: 441 ------IVFATLAEG---ILRVSANGGKPEQLIVPKNNEMMLEPQTLPGGETILYSLVES 491

Query: 321 DREGKEQ-----LYVMQSNGSDQKRISQDKEASYFDPV---------------WSP---- 356
            R G        +         +K + QD   + + P                + P    
Sbjct: 492 TRRGTPSWDKGLVIAQNLKSGARKTLVQDGLDARYVPTGHLAYTVGGVLFAVPFDPRRLE 551

Query: 357 -------------QGDLI---AFTKFSGEKF-------------AIGVMKKDGSQERLLV 387
                        +G+ +   AF+      F              + ++ + G  E L V
Sbjct: 552 KTGSAVGIVEGVLRGNGVGQYAFSNSGTLAFVPGPVFTLGAVENVLALVDRRGEVEPLKV 611

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYA--SDPQWV 443
             +    P  S  G+ +++      + G  ++ ++L G      +  P       P W 
Sbjct: 612 VPAGFAFPRASSDGKRIVYQIDDGKEAG--IWILELGGGTAPRRLTLPGNGGNRFPIWS 668


>gi|114799589|ref|YP_759593.1| S9A/B/C family peptidase [Hyphomonas neptunium ATCC 15444]
 gi|114739763|gb|ABI77888.1| peptidase, S9A/B/C family [Hyphomonas neptunium ATCC 15444]
          Length = 696

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 64/348 (18%), Positives = 114/348 (32%), Gaps = 74/348 (21%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPS 209
           R  A  + D  Y S      D  + I +V  S   ++      L  +D    N R L   
Sbjct: 33  RFTAERVFDMEYASDPQVSPDGKT-IAYVRRSMDRMTDRDVGQLWSIDTGTGNHRPLVAG 91

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            +     PR+SP+  ++ Y +       LRV+  DT    A  +     S    P +S +
Sbjct: 92  AEGAA-NPRWSPDGSRLIYMSAAGGKPELRVFYPDTGRSHALAQFLQAPSQ---PVWSPD 147

Query: 269 GKRALISVQ----------------------------------------KDEAMDIYSVD 288
           GK    S+                                         KD    I+ + 
Sbjct: 148 GKYIAFSMFVPSDAPSFAKAPATPEGGKWSDPVKVFDRLTFRFDGAGYLKDGTSQIFVLP 207

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-----------EQLYVMQSNGSD 337
           +      ++T         ++  +++ +V      G             +++ +      
Sbjct: 208 VDGGTPRQVTFGEADLSGPAWLGNATLLV-----SGNLAEDADMDPLESEIHAVSLADLS 262

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVED--S 390
            + ++  ++   +  V SP G  IA+  F  +     +  + +M  DGS  R +  D   
Sbjct: 263 IRPLTS-RDGPDYGAVVSPDGKTIAYRGFDDKVLSYQQDNLYLMNADGSGAREIAADFPG 321

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           N+    W+P GRSL+   +  G     LY I   G    ++     AS
Sbjct: 322 NVGQTLWAPDGRSLLVLSEDHG--VLSLYRITTGGAATKVLTGIGGAS 367



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/316 (16%), Positives = 114/316 (36%), Gaps = 64/316 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           SR++++S +      K  L V   D      L     Q   +P +SP+ + +A++ +   
Sbjct: 105 SRLIYMSAAGG----KPELRVFYPDTGRSHALAQFL-QAPSQPVWSPDGKYIAFSMFVPS 159

Query: 235 DILRV------------------------------YLMDTRI--------DRAPKRIGNF 256
           D                                  YL D              P+++   
Sbjct: 160 DAPSFAKAPATPEGGKWSDPVKVFDRLTFRFDGAGYLKDGTSQIFVLPVDGGTPRQVTFG 219

Query: 257 RSMILAPRFSSNGKRAL---ISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYS 310
            + +  P +  N    +   ++   D      +I++V L   +   LT+    +  A  S
Sbjct: 220 EADLSGPAWLGNATLLVSGNLAEDADMDPLESEIHAVSLADLSIRPLTSRDGPDYGAVVS 279

Query: 311 PDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           PD   I +    +      ++ LY+M ++GS  + I+ D   +    +W+P G  +    
Sbjct: 280 PDGKTIAYRGFDDKVLSYQQDNLYLMNADGSGAREIAADFPGNVGQTLWAPDGRSLLVLS 339

Query: 366 FSGEKFAIGVMKKDGSQERLLV--EDSNLQAP----TWSPSGRS---LIFSRKKDGDTGS 416
                 ++  +   G+  ++L     +++  P    ++S SG     + ++   D D  S
Sbjct: 340 EDHGVLSLYRITTGGAATKVLTGIGGASIGRPYAEGSFSVSGGRNPLVAYTAGFD-DRPS 398

Query: 417 KLYSIDLNGRNETLIN 432
           ++ S  ++G+   ++ 
Sbjct: 399 EVASAAIDGKGMKVLT 414



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 68/206 (33%), Gaps = 53/206 (25%)

Query: 290 QSNATERLTNTLFINIS----ASYSPDSSQIVFES-------DREGKEQLYVMQSNGSDQ 338
            +  ++R T     ++        SPD   I +         DR+   QL+ + +   + 
Sbjct: 27  DTTPSKRFTAERVFDMEYASDPQVSPDGKTIAYVRRSMDRMTDRD-VGQLWSIDTGTGNH 85

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTW 397
           + +    E +  +P WSP G  + +   +G K  + V   D  +   L +     + P W
Sbjct: 86  RPLVAGAEGAA-NPRWSPDGSRLIYMSAAGGKPELRVFYPDTGRSHALAQFLQAPSQPVW 144

Query: 398 SPSGRSLIFS--------------------------------------RKKDGDTGSKLY 419
           SP G+ + FS                                           D  S+++
Sbjct: 145 SPDGKYIAFSMFVPSDAPSFAKAPATPEGGKWSDPVKVFDRLTFRFDGAGYLKDGTSQIF 204

Query: 420 SIDLNGRNETLIN-TPAYASDPQWVG 444
            + ++G     +    A  S P W+G
Sbjct: 205 VLPVDGGTPRQVTFGEADLSGPAWLG 230



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 59/160 (36%), Gaps = 20/160 (12%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVS---------GIIKNSLCVMDRDGANIRYLT 207
           +++D   + +T   G     ++      ++            +++L +M+ DG+  R + 
Sbjct: 257 SLADLSIRPLTSRDGPDYGAVVSPDGKTIAYRGFDDKVLSYQQDNLYLMNADGSGAREIA 316

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA----- 262
                 + +  ++P+ + +   + D   +L +Y + T    A K +       +      
Sbjct: 317 ADFPGNVGQTLWAPDGRSLLVLSEDHG-VLSLYRITTG-GAATKVLTGIGGASIGRPYAE 374

Query: 263 PRFSSNGKR---ALISVQKDEAM-DIYSVDLQSNATERLT 298
             FS +G R      +   D+   ++ S  +     + LT
Sbjct: 375 GSFSVSGGRNPLVAYTAGFDDRPSEVASAAIDGKGMKVLT 414


>gi|58580571|ref|YP_199587.1| hypothetical protein XOO0948 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58425165|gb|AAW74202.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 800

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 11/231 (4%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               +  +       P  SP+   VAYA+   +      L+ T  +  P+ +      + 
Sbjct: 237 RPYQVITAGGGFDLTPSLSPDGAMVAYASLTGDRTGTSILVKTTDNAYPRVLETPAPGVS 296

Query: 262 A--PRFSSNGKRALISVQK-DEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQI 316
              P +S +G+    S Q  D +  +        A  R  +       +S S+SPD+  +
Sbjct: 297 DRLPAWSPDGREIAFSRQAPDGSCRVMIAAATGPAAAREVVRCDRADMLSFSWSPDARAL 356

Query: 317 VFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFA 372
           +F S     G  ++  +       + ++   +A  FD  P +SP G  I F +       
Sbjct: 357 LFGSMTGSYGAARIRRLNLETGQWQTLNYPAQAGDFDYAPRYSPDGHWIVFLRNPQLGDL 416

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +  + G+ ERL  + +++   +W P G  +IF R+   D  ++LY +DL
Sbjct: 417 WRIPAEGGAAERLTHDTADIWGWSWLPDGSGVIFGRRV--DIEARLYRLDL 465



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 57/317 (17%), Positives = 106/317 (33%), Gaps = 60/317 (18%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           S+       S+ V   D A  R L TP+       P +SP+ +++A++    +   RV +
Sbjct: 265 SLTGDRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGREIAFSRQAPDGSCRVMI 324

Query: 242 MDTRIDRAPKRIGN-FRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLT 298
                  A + +    R+ +L+  +S + +  L         A  I  ++L++   + L 
Sbjct: 325 AAATGPAAAREVVRCDRADMLSFSWSPDARALLFGSMTGSYGAARIRRLNLETGQWQTL- 383

Query: 299 NTLF----INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           N        + +  YSPD   IVF  + +    L+ + + G   +R++ D    +    W
Sbjct: 384 NYPAQAGDFDYAPRYSPDGHWIVFLRNPQ-LGDLWRIPAEGGAAERLTHDTADIWGW-SW 441

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKK------------------------------------ 378
            P G  + F +    +  +  +                                      
Sbjct: 442 LPDGSGVIFGRRVDIEARLYRLDLLDSSLHDLGVDDAQAPDVAHGHLVFAQRKPQFGVYQ 501

Query: 379 ------DGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR---N 427
                 +G   + RL         P  +P GR L+F+  + G  G     +   G     
Sbjct: 502 VIRDTMNGGYIRRRLFSSSGRDDQPMIAPDGRQLVFASNRSGTYGLWWGDVSKPGSVRLI 561

Query: 428 ETLINTPAYASDPQWVG 444
           E L      A+D  W  
Sbjct: 562 EGLRPDSRQAAD--WSA 576



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 73/233 (31%), Gaps = 16/233 (6%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMD 283
           ++ +         +   +     R  + I       L P  S +G      S+  D    
Sbjct: 214 QIMWRRVPASGAAQASAVLGSPKRPYQVITAGGGFDLTPSLSPDGAMVAYASLTGDRTGT 273

Query: 284 IYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQK 339
              V    NA  R+  T    +S    ++SPD  +I F     +G  ++ +  + G    
Sbjct: 274 SILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGREIAFSRQAPDGSCRVMIAAATGPAAA 333

Query: 340 R-ISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLV----EDSNL 392
           R + +   A      WSP    + F   +G      I  +  +  Q + L          
Sbjct: 334 REVVRCDRADMLSFSWSPDARALLFGSMTGSYGAARIRRLNLETGQWQTLNYPAQAGDFD 393

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
            AP +SP G  ++F R         L+ I   G     +           W+ 
Sbjct: 394 YAPRYSPDGHWIVFLRN---PQLGDLWRIPAEGGAAERLTHDTADIWGWSWLP 443



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 77/257 (29%), Gaps = 54/257 (21%)

Query: 213 ILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             + PR+SP+   + +       D+ R+         A +R+ +  + I    +  +G  
Sbjct: 392 FDYAPRYSPDGHWIVFLRNPQLGDLWRI----PAEGGAAERLTHDTADIWGWSWLPDGSG 447

Query: 272 ALISVQKDEAMDIYSVDL------------------------------------------ 289
            +   + D    +Y +DL                                          
Sbjct: 448 VIFGRRVDIEARLYRLDLLDSSLHDLGVDDAQAPDVAHGHLVFAQRKPQFGVYQVIRDTM 507

Query: 290 -QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEA 347
                  RL ++   +     +PD  Q+VF S+R G   L+    +     R+ +  +  
Sbjct: 508 NGGYIRRRLFSSSGRDDQPMIAPDGRQLVFASNRSGTYGLWWGDVSKPGSVRLIEGLRPD 567

Query: 348 SYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS---PSGRS 403
           S     WS     +  +   +    A+  +     +   L E             P  + 
Sbjct: 568 SRQAADWSADSQRLLVSGSDAAGHAALFEVTPSSGKVVRLPEPQPRPLQAIHLPDPD-QV 626

Query: 404 LIFSRKKDGDTGSKLYS 420
           L+ +   DG T + LY 
Sbjct: 627 LVLAAADDGHTFATLYD 643


>gi|300774153|ref|ZP_07084021.1| Tricorn family protease [Sphingobacterium spiritivorum ATCC 33861]
 gi|300758964|gb|EFK55792.1| Tricorn family protease [Sphingobacterium spiritivorum ATCC 33861]
          Length = 1056

 Score =  113 bits (283), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 89/247 (36%), Gaps = 22/247 (8%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            S+      P  SP+ Q + ++   D D+ +V            R+       +APR S 
Sbjct: 22  QSQASFFSYPTLSPDGQTIVFSY--DGDLWKV----AADGGLALRLTAMSGTEIAPRISP 75

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +GK    S  ++  MD+Y + L+     +LT     +   S+S DS  I F S R  +  
Sbjct: 76  DGKWLAFSSNQNGNMDVYIMPLEGGDIRQLTYHDAGDEVDSWSWDSKSIYFTSSRYNRFS 135

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGE-----KFAIGV 375
            Y +  NG   +R+      +  + V +P G+L+        F              I  
Sbjct: 136 SYKVAVNGGTAERMFPHYFNTIHNVVETPSGELLFNDSWESNFASNRKRYKGAFNPDILS 195

Query: 376 MKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                 Q +   +       P+    G ++ F+   + +    LYS  ++G+   L   P
Sbjct: 196 YSPKQKQFKQYTDYAGKDFWPSVDQKG-AIYFASD-EANGEYNLYSF-VDGKKTGLTKFP 252

Query: 435 AYASDPQ 441
                P 
Sbjct: 253 TSIKRPA 259



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 91/212 (42%), Gaps = 19/212 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +K+A+ +  +     +++ D    +  +++      I+  ++  + K  L +    
Sbjct: 316 SPDGKKMAFVSRGE-----LFVSDIE-GKFVRQMPGQGERIVEVKWLKDNKTLLFNQTYQ 369

Query: 280 EAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             ++ +++        ++LT  L  N    ++ D +  V+ S   G++++ ++  N    
Sbjct: 370 GYLNWFTIAADGKEQAKQLTKDLRNNRIIEFNKDRTLGVYLS---GRDEVRILDLNTLKS 426

Query: 339 KRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-AP 395
             + +D+  ++ +  P +SP G+ I FT +   +  I +     +    L      +  P
Sbjct: 427 NTVVKDEIWAFQNSSPSFSPDGNYILFTAYRNFEQDIMLHNLKTNSTINLTNTGVSELTP 486

Query: 396 TWSPSGRSLIFSRKK------DGDTGSKLYSI 421
           TWSP G+ + F+  +       G   + +Y +
Sbjct: 487 TWSPDGKYIYFASNRTKPSYPTGVQNASIYRM 518



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/341 (14%), Positives = 119/341 (34%), Gaps = 36/341 (10%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWR-KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           + +    + +    + S+ AS R +     + DI      +K  F     +  +     +
Sbjct: 160 VVETPSGELLFNDSWESNFASNRKRYKGAFNPDILSYSPKQK-QFKQYTDYAGKDFWPSV 218

Query: 189 IKNSLCVMDRDGANIRYLTPSR-----------DQILFEPRFSPNQQKVAY---ATYDDE 234
            +        D AN  Y   S               +  P  S N  KV +         
Sbjct: 219 DQKGAIYFASDEANGEYNLYSFVDGKKTGLTKFPTSIKRPAVSANGSKVVFEKDYQLFLY 278

Query: 235 DILRVYLMDTRIDRAPKRIGN------FRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           D+     +  +I  +   + N       + +I     S +GK+     +     +++  D
Sbjct: 279 DVATKKTIQPKIAISRNLVLNKQQEFDVKDIISNVDVSPDGKKMAFVSRG----ELFVSD 334

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEA 347
           ++     ++       +   +  D+  ++F    +G    + + ++G +Q K++++D   
Sbjct: 335 IEGKFVRQMPGQGERIVEVKWLKDNKTLLFNQTYQGYLNWFTIAADGKEQAKQLTKDLRN 394

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAPTWSPSGRS 403
           +     ++    L  +      +  + ++  +  +   +V+D        +P++SP G  
Sbjct: 395 NRI-IEFNKDRTLGVYLS---GRDEVRILDLNTLKSNTVVKDEIWAFQNSSPSFSPDGNY 450

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           ++F+  ++ +    L+++  N     L NT      P W  
Sbjct: 451 ILFTAYRNFEQDIMLHNLKTN-STINLTNTGVSELTPTWSP 490


>gi|296331793|ref|ZP_06874260.1| putative acylaminoacyl-peptidase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675817|ref|YP_003867489.1| putative acylaminoacyl-peptidase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296151118|gb|EFG92000.1| putative acylaminoacyl-peptidase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305414061|gb|ADM39180.1| putative acylaminoacyl-peptidase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 657

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 81/240 (33%), Gaps = 49/240 (20%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNG 269
           + +P+++P+  + AY           Y  +  +            +       PR+S +G
Sbjct: 16  VTDPQYAPDGSRAAYVQSQVNQEKDSYTSNIWVYETKSGGSVPWTHGEKRCTDPRWSPDG 75

Query: 270 KRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI------------ 316
           +       +D  A  +Y +  +     +LT+  +      +SPD   +            
Sbjct: 76  RTLAFISDRDGDAAQLYIMSAEGGEARKLTDIPYGVSKPIWSPDGESVLVIVSLGEGESI 135

Query: 317 -------------------VFESD-----REGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                               ++ D     R    QL ++     + K+++ + +A + DP
Sbjct: 136 NDREKTEPDSFEPVEVQGLAYKRDGKGLTRGAYAQLVLVSVKSGEVKQLT-NHKADHGDP 194

Query: 353 VWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLI 405
            +SP G  + F      T  + + + + +M  +    + +        P ++S  GR L 
Sbjct: 195 AFSPDGKWLVFSANLTETNDASKPYDVCMMSLESGDLKQITSHRGSFGPSSFSTDGRYLA 254



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 81/231 (35%), Gaps = 49/231 (21%)

Query: 259 MILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +  P+++ +G RA     +          +I+  + +S  +   T+         +SPD
Sbjct: 15  SVTDPQYAPDGSRAAYVQSQVNQEKDSYTSNIWVYETKSGGSVPWTHGEKRCTDPRWSPD 74

Query: 313 SSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              + F SDR+G   QLY+M + G + ++++ D       P+WSP G+ +      GE  
Sbjct: 75  GRTLAFISDRDGDAAQLYIMSAEGGEARKLT-DIPYGVSKPIWSPDGESVLVIVSLGEGE 133

Query: 372 AIG------------------------------------VMKKDGSQERLLV-EDSNLQA 394
           +I                                     ++     + + L    ++   
Sbjct: 134 SINDREKTEPDSFEPVEVQGLAYKRDGKGLTRGAYAQLVLVSVKSGEVKQLTNHKADHGD 193

Query: 395 PTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           P +SP G+ L+FS       D      +  + L   +   I +   +  P 
Sbjct: 194 PAFSPDGKWLVFSANLTETNDASKPYDVCMMSLESGDLKQITSHRGSFGPS 244



 Score =  106 bits (265), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 50/317 (15%), Positives = 104/317 (32%), Gaps = 72/317 (22%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           SR  +V   V       +  +   +   G ++ +     ++   +PR+SP+ + +A+ + 
Sbjct: 26  SRAAYVQSQVNQEKDSYTSNIWVYETKSGGSVPWT--HGEKRCTDPRWSPDGRTLAFISD 83

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------------- 277
            D D  ++Y+M        +++ +    +  P +S +G+  L+ V               
Sbjct: 84  RDGDAAQLYIMSAE-GGEARKLTDIPYGVSKPIWSPDGESVLVIVSLGEGESINDREKTE 142

Query: 278 ----------------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                                 +     +  V ++S   ++LTN    +   ++SPD   
Sbjct: 143 PDSFEPVEVQGLAYKRDGKGLTRGAYAQLVLVSVKSGEVKQLTNHKADHGDPAFSPDGKW 202

Query: 316 IVF------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----K 365
           +VF       +D      + +M     D K+I+     S+    +S  G  +A      +
Sbjct: 203 LVFSANLTETNDASKPYDVCMMSLESGDLKQITS-HRGSFGPSSFSTDGRYLALLGHEKE 261

Query: 366 FSGEKFA-IGVMKKDGSQERLLVE----------------DSNLQAPTWSPSGRSLIFSR 408
           +    F    +   +      L E                    Q P W+   +      
Sbjct: 262 YKNATFEKAWLYDIEQDYLTCLTEMLDVHLADALIGDSLIGGAEQRPVWTKDSQGFYVIG 321

Query: 409 KKDGDTGSKLYSIDLNG 425
              G TG  +Y I + G
Sbjct: 322 TDQGSTG--IYYISIEG 336



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 9/105 (8%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVED-SNLQAPTWSPS 400
           S  DP ++P G   A+ +    +        I V +                  P WSP 
Sbjct: 15  SVTDPQYAPDGSRAAYVQSQVNQEKDSYTSNIWVYETKSGGSVPWTHGEKRCTDPRWSPD 74

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
           GR+L F   +DGD  ++LY +   G     L + P   S P W  
Sbjct: 75  GRTLAFISDRDGD-AAQLYIMSAEGGEARKLTDIPYGVSKPIWSP 118


>gi|262194656|ref|YP_003265865.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262078003|gb|ACY13972.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1607

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 109/269 (40%), Gaps = 27/269 (10%)

Query: 162  IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            IY +     G   +RI  VS          ++ V + DG     +    D  ++  RFSP
Sbjct: 1147 IYAASFSPDG---TRIASVSA-------DKTVRVWNTDGTGTPLVLRGHDDEIYAVRFSP 1196

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            +  ++A A++D      + + +       + +    + +    FS +G    IS  +D  
Sbjct: 1197 DGTRIASASWDK----TIRIWNADGTGEARVLRGHAAALYGVDFSPDGSFL-ISASEDTT 1251

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            + ++ ++ +S A   L       +    S D S++   S  +G  +++   ++G+D   +
Sbjct: 1252 LRLWPLN-RSGAPLILRGHDANILKVRLSADGSRVASASS-DGTVRIW--NTDGTDSPVV 1307

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSP 399
             +  +    D  +SP G  I    F      I +   DG+   +++   + +  A ++SP
Sbjct: 1308 LRGHQGPVTDAAFSPDGTRIVSASFDKT---IRIWSADGTGPPVILHGHDDRVLAASFSP 1364

Query: 400  SGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             G  ++ +     D   +L++ D  G  +
Sbjct: 1365 DGTRIVSASW---DATVRLWNADGTGSPQ 1390



 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 103/264 (39%), Gaps = 13/264 (4%)

Query: 176  RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            R+      V S     ++ + + DG +   +       + +  FSP+  ++  A++D   
Sbjct: 1277 RLSADGSRVASASSDGTVRIWNTDGTDSPVVLRGHQGPVTDAAFSPDGTRIVSASFDK-- 1334

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
               + +        P  +      +LA  FS +G R + S   D  + +++ D   +   
Sbjct: 1335 --TIRIWSADGTGPPVILHGHDDRVLAASFSPDGTRIV-SASWDATVRLWNADGTGSPQI 1391

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
               +   I  +A +SPD ++IV  S       + +  ++G+   R+    + S +   +S
Sbjct: 1392 FRGHENAI-WAARFSPDGTRIVSAS---WDATVRLWNADGTGSARVLGSHDDSCWSASFS 1447

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            P G  +  T +        V + D +   L   +  +    +SP GR ++ S  KDG   
Sbjct: 1448 PDGQRVVSTSYDRTVRVWHVGEVD-APLVLRGHEDWVSGAAFSPDGRRIV-SSSKDGT-- 1503

Query: 416  SKLYSIDLNGRNETLINTPAYASD 439
             +++  D +     L     + +D
Sbjct: 1504 IRIWQADGSSPPVILRGHEQWVTD 1527



 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 89/230 (38%), Gaps = 16/230 (6%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             +VS     ++ +   DG     +    D  +    FSP+  ++  A++D      V L 
Sbjct: 1326 RIVSASFDKTIRIWSADGTGPPVILHGHDDRVLAASFSPDGTRIVSASWD----ATVRLW 1381

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            +     +P+      + I A RFS +G R + S   D  + +++ D  + +   L +   
Sbjct: 1382 NADGTGSPQIFRGHENAIWAARFSPDGTRIV-SASWDATVRLWNAD-GTGSARVLGSHDD 1439

Query: 303  INISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               SAS+SPD  ++V  S DR     + V      D   + +  E       +SP G  I
Sbjct: 1440 SCWSASFSPDGQRVVSTSYDRT----VRVWHVGEVDAPLVLRGHEDWVSGAAFSPDGRRI 1495

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRK 409
              +   G    I + + DGS   +++           + P G  L+ +  
Sbjct: 1496 VSSSKDGT---IRIWQADGSSPPVILRGHEQWVTDVHFHPRGHQLVSASY 1542



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 99/272 (36%), Gaps = 17/272 (6%)

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            +  E    + R     E + S     ++ V + DG     +       +    FSP+  +
Sbjct: 973  LGHEAPVISVRFSPDGERIASSSADKTIRVWNTDGTGEPIVLRGHSDAVVSVAFSPDGTR 1032

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +  ++ D      + + +     +P  +     ++    F+SNG   + S   D+ + ++
Sbjct: 1033 IVSSSRDR----TIRVWNADGTGSPVLLRGHSDLVHEVSFTSNGTYIV-SASWDKTIRVW 1087

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
              D  +     L     +   AS + DS++IV  S   G + + V   +      + +  
Sbjct: 1088 HSD-GTGQPLVLRGHEEMVYGASANGDSTRIVSSS---GDKTVRVWNMDSPSDPLVLRGH 1143

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRS 403
            E   +   +SP G  IA          + V   DG+   L++   + +  A  +SP G  
Sbjct: 1144 EGIIYAASFSPDGTRIASVSADKT---VRVWNTDGTGTPLVLRGHDDEIYAVRFSPDGTR 1200

Query: 404  LIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +  +     D   ++++ D  G    L    A
Sbjct: 1201 IASASW---DKTIRIWNADGTGEARVLRGHAA 1229



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 93/243 (38%), Gaps = 24/243 (9%)

Query: 154  IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            I H   D +  +     G            +VS     ++ + + DG     +    +  
Sbjct: 1349 ILHGHDDRVLAASFSPDG----------TRIVSASWDATVRLWNADGTGSPQIFRGHENA 1398

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            ++  RFSP+  ++  A++D      V L +     + + +G+      +  FS +G+R +
Sbjct: 1399 IWAARFSPDGTRIVSASWDA----TVRLWNADGTGSARVLGSHDDSCWSASFSPDGQR-V 1453

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +S   D  + ++ V  + +A   L         A++SPD  +IV  S ++G   + + Q+
Sbjct: 1454 VSTSYDRTVRVWHV-GEVDAPLVLRGHEDWVSGAAFSPDGRRIV-SSSKDGT--IRIWQA 1509

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDS 390
            +GS    I +  E    D  + P+G  +    +         +  +  D    RL    S
Sbjct: 1510 DGSSPPVILRGHEQWVTDVHFHPRGHQLVSASYDATVRVWSDLAPVALD--DPRLWTRTS 1567

Query: 391  NLQ 393
               
Sbjct: 1568 YCM 1570



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 74/179 (41%), Gaps = 9/179 (5%)

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
             + + A +      + +++ RFS +G+R   S   D+ + +++ D  +     L      
Sbjct: 963  LQTEIAREVFLGHEAPVISVRFSPDGERIA-SSSADKTIRVWNTD-GTGEPIVLRGHSDA 1020

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +S ++SPD ++IV  S R+    + V  ++G+    + +       +  ++  G  I  
Sbjct: 1021 VVSVAFSPDGTRIV-SSSRD--RTIRVWNADGTGSPVLLRGHSDLVHEVSFTSNGTYIVS 1077

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              +      I V   DG+ + L++          S +G S        GD   +++++D
Sbjct: 1078 ASWDKT---IRVWHSDGTGQPLVLRGHEEMVYGASANGDSTRIVSS-SGDKTVRVWNMD 1132


>gi|77359984|ref|YP_339559.1| protease [Pseudoalteromonas haloplanktis TAC125]
 gi|76874895|emb|CAI86116.1| putative protease [Pseudoalteromonas haloplanktis TAC125]
          Length = 1080

 Score =  113 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 44/220 (20%), Positives = 88/220 (40%), Gaps = 14/220 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + ++V +    +   + V    TR           +   ++  +S NG+       + 
Sbjct: 327 SHDGKRVLFTARGELFSVPVKNGPTRNLSH-----TPKGREISATWSPNGRYIAYMSDET 381

Query: 280 EAMDIYSVD-LQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              +IY  D   +N  ++LT+   I      +SPD+ +++F    +    L+ +      
Sbjct: 382 GEYEIYLKDRANNNQVKQLTSNGSIWRFEPVWSPDNKKLLFS---DQNHTLWWLDIKTGK 438

Query: 338 QKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVED-SNLQ 393
           Q++I   K         +WSP  + I F K +  ++A +        +   L +D S+  
Sbjct: 439 QRKIDTAKYNEDGLTSYIWSPNSEDIVFVKNNENRYASLWHYNLKDKRVTRLTDDMSSET 498

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            P +SP G+ L F+ ++D +     Y  D    N T + +
Sbjct: 499 NPAFSPDGQQLYFTSERDFNLTFSSYEFDYMFNNATRLYS 538



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 76/189 (40%), Gaps = 30/189 (15%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A DIY  + ++  + RLT+ +       +SPD SQI F +   G  Q+YVM  +GSD K+
Sbjct: 48  AGDIYIANTKTGKSTRLTDHIGFETFPKFSPDGSQIAFSAQYNGSRQVYVMNRDGSDLKQ 107

Query: 341 ISQDKEASYFDPV---------WSPQGDLIAF----TKFSGEKFAIGVMKKDGSQERLLV 387
           ++   +     P          W+P G  I F    T +        ++   G  E+ L 
Sbjct: 108 LTYYNDVGVMPPRGGFDYRVLDWTPDGKHIVFRANRTPYGQRVGRPYIVPAAGGLEQPLA 167

Query: 388 ---EDSNLQAPTWSPSGRSLIFS---------RKKDGDTGSKLYSIDL-NGRNETLINTP 434
                  +     SP G+  +++         ++  G     ++  DL N +++ L    
Sbjct: 168 IPETGGGML----SPDGKQYVYTPIDREFRTWKRTRGGRAQDVWVYDLENNKSKQLTTNR 223

Query: 435 AYASDPQWV 443
           A    P WV
Sbjct: 224 ATDQQPTWV 232



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 89/245 (36%), Gaps = 38/245 (15%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           + + + +     E +  VY  D  I         R+ +       P+FS +G +   S Q
Sbjct: 29  DTRLLRFPDIHKESVTFVYAGDIYIANTKTGKSTRLTDHIGFETFPKFSPDGSQIAFSAQ 88

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA----------SYSPDSSQIVFESDREGKEQ 327
            + +  +Y ++   +  ++LT    + +             ++PD   IVF ++R    Q
Sbjct: 89  YNGSRQVYVMNRDGSDLKQLTYYNDVGVMPPRGGFDYRVLDWTPDGKHIVFRANRTPYGQ 148

Query: 328 ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFA 372
                Y++ + G  ++ ++  +       + SP G    +T              G    
Sbjct: 149 RVGRPYIVPAAGGLEQPLAIPETG---GGMLSPDGKQYVYTPIDREFRTWKRTRGGRAQD 205

Query: 373 IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           + V   + ++ + L  + +  Q PTW  +   + +   +  +    LY    +G+N   +
Sbjct: 206 VWVYDLENNKSKQLTTNRATDQQPTWVNNN--IYYVSDR--EYTLNLYK-HQDGKNPIKV 260

Query: 432 NTPAY 436
              + 
Sbjct: 261 TNHSD 265



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 55/289 (19%), Positives = 105/289 (36%), Gaps = 33/289 (11%)

Query: 89  QKITNPDSIPRFQD----WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
           Q   NP  +    D    W S G   +V               F   D   + + +    
Sbjct: 252 QDGKNPIKVTNHSDFDVLWPSAGPNAIVY------ENGGYLYRFD--DATQQSEKLSINV 303

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
             +       +  +SD I        G    R+LF +        +  L  +       R
Sbjct: 304 QGNREHTMAYSKNVSDFIDSMDVSHDG---KRVLFTA--------RGELFSVPVKNGPTR 352

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAP 263
            L+ +         +SPN + +AY + D+     +YL D   +   K++ +  S+    P
Sbjct: 353 NLSHTPKGREISATWSPNGRYIAYMS-DETGEYEIYLKDRANNNQVKQLTSNGSIWRFEP 411

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFES 320
            +S + K+ L S   D+   ++ +D+++    ++    +     +   +SP+S  IVF  
Sbjct: 412 VWSPDNKKLLFS---DQNHTLWWLDIKTGKQRKIDTAKYNEDGLTSYIWSPNSEDIVFVK 468

Query: 321 DREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + E +   L+          R++ D  +S  +P +SP G  + FT    
Sbjct: 469 NNENRYASLWHYNLKDKRVTRLT-DDMSSETNPAFSPDGQQLYFTSERD 516



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 55/371 (14%), Positives = 118/371 (31%), Gaps = 101/371 (27%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            ++D I      +     S+I F ++   S      + VM+RDG++++ LT   D  +  
Sbjct: 63  RLTDHIGFETFPKFSPDGSQIAFSAQYNGS----RQVYVMNRDGSDLKQLTYYNDVGVMP 118

Query: 217 PR---------FSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILA 262
           PR         ++P+ + + +               +      +++          M   
Sbjct: 119 PRGGFDYRVLDWTPDGKHIVFRANRTPYGQRVGRPYIVPAAGGLEQPLAIPETGGGM--- 175

Query: 263 PRFSSNGKRALIS-----------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
              S +GK+ + +            +   A D++  DL++N +++LT     +   ++  
Sbjct: 176 --LSPDGKQYVYTPIDREFRTWKRTRGGRAQDVWVYDLENNKSKQLTTNRATDQQPTWV- 232

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP--------------- 356
            ++ I + SDRE    LY    +G +  +++   +     P   P               
Sbjct: 233 -NNNIYYVSDREYTLNLYK-HQDGKNPIKVTNHSDFDVLWPSAGPNAIVYENGGYLYRFD 290

Query: 357 --------------------------------------QGDLIAFTKFSGEKFAIGVMKK 378
                                                  G  + FT        +  +  
Sbjct: 291 DATQQSEKLSINVQGNREHTMAYSKNVSDFIDSMDVSHDGKRVLFTARG----ELFSVPV 346

Query: 379 DGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPA 435
                R L         + TWSP+GR + +   + G+   ++Y  D    N+   + +  
Sbjct: 347 KNGPTRNLSHTPKGREISATWSPNGRYIAYMSDETGE--YEIYLKDRANNNQVKQLTSNG 404

Query: 436 --YASDPQWVG 444
             +  +P W  
Sbjct: 405 SIWRFEPVWSP 415



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 91/255 (35%), Gaps = 53/255 (20%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
            +DG N   +T   D  +  P   PN   + Y     E+   +Y  D    ++ K   N 
Sbjct: 251 HQDGKNPIKVTNHSDFDVLWPSAGPNA--IVY-----ENGGYLYRFDDATQQSEKLSINV 303

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +            +   ++  K+ +  I S+D+                    S D  ++
Sbjct: 304 QGN----------REHTMAYSKNVSDFIDSMDV--------------------SHDGKRV 333

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +F +    + +L+ +       + +S   +       WSP G  IA+      ++ I + 
Sbjct: 334 LFTA----RGELFSVPVKNGPTRNLSHTPKGREISATWSPNGRYIAYMSDETGEYEIYLK 389

Query: 377 K-KDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              + +Q + L  + ++    P WSP  + L+FS     D    L+ +D+    +  I+T
Sbjct: 390 DRANNNQVKQLTSNGSIWRFEPVWSPDNKKLLFS-----DQNHTLWWLDIKTGKQRKIDT 444

Query: 434 PAYASDP----QWVG 444
             Y  D      W  
Sbjct: 445 AKYNEDGLTSYIWSP 459


>gi|268315717|ref|YP_003289436.1| WD40 domain-containing protein beta Propeller [Rhodothermus marinus
           DSM 4252]
 gi|262333251|gb|ACY47048.1| WD40 domain protein beta Propeller [Rhodothermus marinus DSM 4252]
          Length = 970

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 95/245 (38%), Gaps = 24/245 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVY--LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            +SP+ + +A+A  +      V   L     D    +     +   AP F+ +G+R    
Sbjct: 347 AWSPDGRWLAFARRERGPKGGVVYDLWLASADGRTHQQLTRGARAFAPTFAPDGRRLAFV 406

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDREGKEQLYVMQ 332
              D A  +  +DL++ A  R T     ++   +  + PD   +VF+   EG+ +  V+ 
Sbjct: 407 SVADGAAHLQVLDLEAGAV-RWTKAFPASVRIGTVRWRPDGRALVFDRFVEGRRRDLVLW 465

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---- 388
              +D   +  D       PVWSP+G  +AFT        + V+     +   +      
Sbjct: 466 YPETDSLVVLTDGRHDDRGPVWSPEGRHLAFTSLRDGVPNVFVLDTASGKVARVTRLVTG 525

Query: 389 ----DSNLQAPTWSPSGR-SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP--Q 441
               D    +P + P GR +++ +  K G+      ++ L       +  P    +P   
Sbjct: 526 ARVLDWLPPSPGF-PEGRLAVVVTLSKYGE------AVRLVDARRRAVERPVEVPEPYRA 578

Query: 442 WVGFM 446
           W+ ++
Sbjct: 579 WMAYV 583



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 89/270 (32%), Gaps = 15/270 (5%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           +   P  WR +   +  DI   +     D         E    G +   L +   DG   
Sbjct: 327 YVGRPGHWRAV---VEGDIRPPV-AWSPDGRWLAFARRERGPKGGVVYDLWLASADGRTH 382

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + LT       F P F+P+ +++A+ +  D       L          +       I   
Sbjct: 383 QQLTRG--ARAFAPTFAPDGRRLAFVSVADGAAHLQVLDLEAGAVRWTKAFPASVRIGTV 440

Query: 264 RFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           R+  +G+  +     +       +   ++++   LT+    +    +SP+   + F S R
Sbjct: 441 RWRPDGRALVFDRFVEGRRRDLVLWYPETDSLVVLTDGRHDDRGPVWSPEGRHLAFTSLR 500

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEA----SYFDPVWS-PQGDLIAFTKFSGEKFAIGVMK 377
           +G   ++V+ +      R+++         +  P    P+G L      S    A+ ++ 
Sbjct: 501 DGVPNVFVLDTASGKVARVTRLVTGARVLDWLPPSPGFPEGRLAVVVTLSKYGEAVRLVD 560

Query: 378 KDGSQERLLV---EDSNLQAPTWSPSGRSL 404
                    V   E         +PS R L
Sbjct: 561 ARRRAVERPVEVPEPYRAWMAYVAPSRRML 590


>gi|262198463|ref|YP_003269672.1| peptidase S41 [Haliangium ochraceum DSM 14365]
 gi|262081810|gb|ACY17779.1| peptidase S41 [Haliangium ochraceum DSM 14365]
          Length = 1167

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 85/238 (35%), Gaps = 13/238 (5%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           L++ ++      K S+ V D DG + +    S  Q +     SP+ ++  +    D    
Sbjct: 339 LYLFDAGTREERKLSIYVPD-DGLSRQSEWVSAGQHIESFSLSPDGKRALFVGRGD---- 393

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ER 296
            ++ +               +      +  +G   +         +++ VD +  +   +
Sbjct: 394 -LFTVPVEHGLVRNLSHTPNAHEREASWMPDGSHVVYVSDWSGEEELWVVDQRGQSPARQ 452

Query: 297 LTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           LT           +SPD   + +   R    +++V+ + G     ++ +      D  WS
Sbjct: 453 LTKGNGGRLYEPRFSPDGRHVAYSDHRG---RIFVIPAAGGQPLEVADEPFGRADDYRWS 509

Query: 356 PQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKD 411
           P G  +AF+        +I +      + R +      + +P W P G  + F  +++
Sbjct: 510 PDGQFLAFSLSDDTGLSSIYIWGMRDRRLRRITGPEFDEGSPVWHPGGEHIFFLSRRE 567



 Score =  106 bits (265), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 77/222 (34%), Gaps = 31/222 (13%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+     + L P+FS +G+    + Q      +Y + +      +LT       
Sbjct: 108 SGGTAARLTAHPGLELFPKFSPDGQWIAFTGQYGGDEQVYVISVGGGTPRQLTYYPARGP 167

Query: 306 SAS----------YSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFD 351
             +          ++PD +Q++F S R+    G  +LY    +G     +   +      
Sbjct: 168 LPARWGYDNQVYGWTPDGTQVLFRSLRDSYDVGSSRLYTAAVSGGMPSPLPMPEAG---A 224

Query: 352 PVWSPQGDLIAFT----------KFSGE-KFAIGVMKKDGSQERLLVEDSN-LQAPTWSP 399
              SP G  + ++          +++G     + V   D +  + + +D    + P W  
Sbjct: 225 GALSPDGKRVVYSPLFRDFRTWKRYAGGWAQDLYVFDIDNTSVQRITDDPRVDRDPMWI- 283

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            G S+ F+ ++ G +    Y  +     +   +T      P 
Sbjct: 284 -GDSVYFASERTGVSNLFRYDFETGSAEQLTTHTDWDVRWPS 324



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 64/196 (32%), Gaps = 28/196 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            + +   D    ++          RLT    + +   +SPD   I F     G EQ+YV+
Sbjct: 94  VVFTYAGD----LWLARTSGGTAARLTAHPGLELFPKFSPDGQWIAFTGQYGGDEQVYVI 149

Query: 332 QSNGSDQKRISQDK---------EASYFDPVWSPQGDLIAFTKFSG----EKFAIGVMKK 378
              G   ++++                    W+P G  + F             +     
Sbjct: 150 SVGGGTPRQLTYYPARGPLPARWGYDNQVYGWTPDGTQVLFRSLRDSYDVGSSRLYTAAV 209

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFS---------RKKDGDTGSKLYSIDLNGRN-E 428
            G     L       A   SP G+ +++S         ++  G     LY  D++  + +
Sbjct: 210 SGGMPSPLPMP-EAGAGALSPDGKRVVYSPLFRDFRTWKRYAGGWAQDLYVFDIDNTSVQ 268

Query: 429 TLINTPAYASDPQWVG 444
            + + P    DP W+G
Sbjct: 269 RITDDPRVDRDPMWIG 284



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/340 (15%), Positives = 103/340 (30%), Gaps = 85/340 (25%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA----- 229
           +++LF S      +  + L      G      +P           SP+ ++V Y+     
Sbjct: 186 TQVLFRSLRDSYDVGSSRLYTAAVSGG---MPSPLPMPEAGAGALSPDGKRVVYSPLFRD 242

Query: 230 -----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
                 Y       +Y+ D   + + +RI +   +   P +   G     + ++    ++
Sbjct: 243 FRTWKRYAGGWAQDLYVFDID-NTSVQRITDDPRVDRDPMW--IGDSVYFASERTGVSNL 299

Query: 285 YSVDLQSNATERLTNT-------LFINISASY---------------------------- 309
           +  D ++ + E+LT            + S S                             
Sbjct: 300 FRYDFETGSAEQLTTHTDWDVRWPSADASGSIVYELEGDLYLFDAGTREERKLSIYVPDD 359

Query: 310 --------------------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                               SPD  + +F     G+  L+ +       + +S    A  
Sbjct: 360 GLSRQSEWVSAGQHIESFSLSPDGKRALFV----GRGDLFTVPVEHGLVRNLSHTPNAHE 415

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLV--EDSNLQAPTWSPSGRSLIF 406
            +  W P G  + +      +  + V+ + G S  R L       L  P +SP GR + +
Sbjct: 416 REASWMPDGSHVVYVSDWSGEEELWVVDQRGQSPARQLTKGNGGRLYEPRFSPDGRHVAY 475

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTP--AYASDPQWVG 444
           S  +      +++ I   G     +       A D +W  
Sbjct: 476 SDHRG-----RIFVIPAAGGQPLEVADEPFGRADDYRWSP 510



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 101/287 (35%), Gaps = 26/287 (9%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
           + + +    DW+        +G ++ E    L  +  L+D   R++      +       
Sbjct: 308 SAEQLTTHTDWDVRWPSADASGSIVYE----LEGDLYLFDAGTREE-RKLSIYVPDDGLS 362

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           + +  +S   +        D   R LFV         +  L  +  +   +R L+ + + 
Sbjct: 363 RQSEWVSAGQHIESFSLSPDGK-RALFV--------GRGDLFTVPVEHGLVRNLSHTPNA 413

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKR 271
              E  + P+   V Y +    +   ++++D R     +++       +  PRFS +G+ 
Sbjct: 414 HEREASWMPDGSHVVYVSDWSGEE-ELWVVDQRGQSPARQLTKGNGGRLYEPRFSPDGRH 472

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFE-SDREGKEQ 327
              S   D    I+ +         + +       +    +SPD   + F  SD  G   
Sbjct: 473 VAYS---DHRGRIFVIPAAGGQPLEVADEPFGRADDY--RWSPDGQFLAFSLSDDTGLSS 527

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +Y+        +RI+   E     PVW P G+ I F      +  IG
Sbjct: 528 IYIWGMRDRRLRRIT-GPEFDEGSPVWHPGGEHIFFLSRREFQPQIG 573



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 98/283 (34%), Gaps = 46/283 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +    G     LT     +   P+FSP+ Q +A+      D  +VY++       P+
Sbjct: 101 DLWLARTSGGTAARLTA-HPGLELFPKFSPDGQWIAFTGQYGGDE-QVYVISVG-GGTPR 157

Query: 252 RIGNFRSMILAPR----------FSSNGKRALISVQKD----EAMDIYSVDLQSNATERL 297
           ++  + +    P           ++ +G + L    +D     +  +Y+  +       L
Sbjct: 158 QLTYYPARGPLPARWGYDNQVYGWTPDGTQVLFRSLRDSYDVGSSRLYTAAVSGGMPSPL 217

Query: 298 TNTLFINISASYSPDSSQIVF--------ESDR---EGKEQLYVMQSNGSDQKRISQDKE 346
                   + + SPD  ++V+           R      + LYV   + +  +RI+ D  
Sbjct: 218 PMPEA--GAGALSPDGKRVVYSPLFRDFRTWKRYAGGWAQDLYVFDIDNTSVQRITDDPR 275

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
               DP+W   GD + F         +     +      L    D +++ P+   SG S+
Sbjct: 276 V-DRDPMW--IGDSVYFASERTGVSNLFRYDFETGSAEQLTTHTDWDVRWPSADASG-SI 331

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETL----INTPAYASDPQWV 443
           ++      +    LY  D   R E      +     +   +WV
Sbjct: 332 VY------ELEGDLYLFDAGTREERKLSIYVPDDGLSRQSEWV 368


>gi|84622525|ref|YP_449897.1| hypothetical protein XOO_0868 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84366465|dbj|BAE67623.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 783

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 11/231 (4%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               +  +       P  SP+   VAYA+   +      L+ T  +  P+ +      + 
Sbjct: 220 RPYQVITAGGGFDLTPSLSPDGAMVAYASLTGDRTGTSILVKTTDNAYPRVLETPAPGVS 279

Query: 262 A--PRFSSNGKRALISVQK-DEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQI 316
              P +S +G+    S Q  D +  +        A  R  +       +S S+SPD+  +
Sbjct: 280 DRLPAWSPDGREIAFSRQAPDGSCRVMIAAATGPAAAREVVRCDRADMLSFSWSPDARAL 339

Query: 317 VFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFA 372
           +F S     G  ++  +       + ++   +A  FD  P +SP G  I F +       
Sbjct: 340 LFGSMTGSYGAARIRRLNLETGQWQTLNYPAQAGDFDYAPRYSPDGHWIVFLRNPQLGDL 399

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +  + G+ ERL  + +++   +W P G  +IF R+   D  ++LY +DL
Sbjct: 400 WRIPAEGGAAERLTHDTADIWGWSWLPDGSGVIFGRRV--DIEARLYRLDL 448



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 57/317 (17%), Positives = 106/317 (33%), Gaps = 60/317 (18%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           S+       S+ V   D A  R L TP+       P +SP+ +++A++    +   RV +
Sbjct: 248 SLTGDRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGREIAFSRQAPDGSCRVMI 307

Query: 242 MDTRIDRAPKRIGN-FRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLT 298
                  A + +    R+ +L+  +S + +  L         A  I  ++L++   + L 
Sbjct: 308 AAATGPAAAREVVRCDRADMLSFSWSPDARALLFGSMTGSYGAARIRRLNLETGQWQTL- 366

Query: 299 NTLF----INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           N        + +  YSPD   IVF  + +    L+ + + G   +R++ D    +    W
Sbjct: 367 NYPAQAGDFDYAPRYSPDGHWIVFLRNPQ-LGDLWRIPAEGGAAERLTHDTADIWGW-SW 424

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKK------------------------------------ 378
            P G  + F +    +  +  +                                      
Sbjct: 425 LPDGSGVIFGRRVDIEARLYRLDLLDSSLHDLGVDDAQAPDVAHGHLVFAQRKPQFGVYQ 484

Query: 379 ------DGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR---N 427
                 +G   + RL         P  +P GR L+F+  + G  G     +   G     
Sbjct: 485 VIRDTMNGGYIRRRLFSSSGRDDQPMIAPDGRQLVFASNRSGTYGLWWGDVSKPGSVRLI 544

Query: 428 ETLINTPAYASDPQWVG 444
           E L      A+D  W  
Sbjct: 545 EGLRPDSRQAAD--WSA 559



 Score = 90.1 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 73/233 (31%), Gaps = 16/233 (6%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMD 283
           ++ +         +   +     R  + I       L P  S +G      S+  D    
Sbjct: 197 QIMWRRVPASGAAQASAVLGSPKRPYQVITAGGGFDLTPSLSPDGAMVAYASLTGDRTGT 256

Query: 284 IYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQK 339
              V    NA  R+  T    +S    ++SPD  +I F     +G  ++ +  + G    
Sbjct: 257 SILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGREIAFSRQAPDGSCRVMIAAATGPAAA 316

Query: 340 R-ISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLV----EDSNL 392
           R + +   A      WSP    + F   +G      I  +  +  Q + L          
Sbjct: 317 REVVRCDRADMLSFSWSPDARALLFGSMTGSYGAARIRRLNLETGQWQTLNYPAQAGDFD 376

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
            AP +SP G  ++F R         L+ I   G     +           W+ 
Sbjct: 377 YAPRYSPDGHWIVFLRN---PQLGDLWRIPAEGGAAERLTHDTADIWGWSWLP 426



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 76/256 (29%), Gaps = 52/256 (20%)

Query: 213 ILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             + PR+SP+   + +       D+ R+         A +R+ +  + I    +  +G  
Sbjct: 375 FDYAPRYSPDGHWIVFLRNPQLGDLWRI----PAEGGAAERLTHDTADIWGWSWLPDGSG 430

Query: 272 ALISVQKDEAMDIYSVDL------------------------------------------ 289
            +   + D    +Y +DL                                          
Sbjct: 431 VIFGRRVDIEARLYRLDLLDSSLHDLGVDDAQAPDVAHGHLVFAQRKPQFGVYQVIRDTM 490

Query: 290 -QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEA 347
                  RL ++   +     +PD  Q+VF S+R G   L+    +     R+ +  +  
Sbjct: 491 NGGYIRRRLFSSSGRDDQPMIAPDGRQLVFASNRSGTYGLWWGDVSKPGSVRLIEGLRPD 550

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSL 404
           S     WS     +  +       A    V    G   RL V           P   + L
Sbjct: 551 SRQAADWSADSQRLLVSGSDAAGHAALFEVTPSSGKVVRLPVPQPRPLQAIHLPDPDQVL 610

Query: 405 IFSRKKDGDTGSKLYS 420
           + +   DG T + LY 
Sbjct: 611 VLAAADDGHTFATLYD 626


>gi|254881047|ref|ZP_05253757.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319640054|ref|ZP_07994781.1| exported protease [Bacteroides sp. 3_1_40A]
 gi|254833840|gb|EET14149.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317388332|gb|EFV69184.1| exported protease [Bacteroides sp. 3_1_40A]
          Length = 1074

 Score =  113 bits (282), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y   L     ++LT+ +   + A +SPD   I F    +G  +
Sbjct: 32  NGSDIVFSYAGD----LYKAPLNGGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGNTE 87

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKFA--IG 374
           +Y++ ++G + +R++       D       P      W+P G  I +     + F   + 
Sbjct: 88  VYLIPTDGGEPQRLTYTATNSRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGKLW 147

Query: 375 VMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSID- 422
            + K+G    +  L E       ++SP G+ L ++R            G     ++  D 
Sbjct: 148 SISKNGGMSEVIPLPEGGFC---SYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIYDP 204

Query: 423 LNGRNETLINTPAYASDPQWVG 444
              + E + N  A    P W+G
Sbjct: 205 AAKKVENITNNIAQDIIPMWIG 226



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/326 (17%), Positives = 119/326 (36%), Gaps = 49/326 (15%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           +  +      I + I+ DI     GE+  F S                ++ V +      
Sbjct: 202 YDPAAKKVENITNNIAQDIIPMWIGEEIYFIS----------DRDRTMNIFVYNIRTKQT 251

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-- 261
             +T   D  +  P  S N Q + Y     E    +Y +D +  ++ K      S  +  
Sbjct: 252 EKVTHYTDYDVKFP--SSNGQIIVY-----EHGGYLYKLDPKTRKSEKISITLTSDNIYA 304

Query: 262 ------------APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISAS 308
                       A   S +G R  ++ +     +++ V  +   T  +T T         
Sbjct: 305 RKEMKRVADNLTAASLSPDGHRLAVTARG----EVFDVPAEKGVTRDITRTPGANEREGE 360

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SP+  QI + SDR G+ ++++    G D  +++Q+ +      +WSP    I +T    
Sbjct: 361 WSPNGKQIAYISDRTGETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKKILYTDRKN 420

Query: 369 EKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               I  +      +R ++++         +SP  + + +++    +  S +Y   L   
Sbjct: 421 ---RIVEVDIASKAKRTVMQNPEGEFYEVNYSPDSQWITYTKS-GANNMSVIYVYHLTSG 476

Query: 427 NETLIN-------TPAYASDPQWVGF 445
            E  +        +P +++D +++ F
Sbjct: 477 KEYPVTEKWYNSSSPVFSTDGKYLIF 502



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 82/246 (33%), Gaps = 37/246 (15%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N   + ++     D+ +  L         +++ +     +  RFS +GK    + Q D  
Sbjct: 32  NGSDIVFSY--AGDLYKAPLN----GGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGN 85

Query: 282 MDIYSVDLQSNATERLT-------NTLFINISA-----SYSPDSSQIVFESD-REG-KEQ 327
            ++Y +       +RLT       + L   +       +++PD   IV+ +   +G   +
Sbjct: 86  TEVYLIPTDGGEPQRLTYTATNSRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGK 145

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----------FSGEKFAIGVM 376
           L+ +  NG   + I   +        +SP G  +A+ +             G    I + 
Sbjct: 146 LWSISKNGGMSEVIPLPEGGF---CSYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIY 202

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                +   +  + +    P W   G  + F   +D      +Y+I      +    T  
Sbjct: 203 DPAAKKVENITNNIAQDIIPMWI--GEEIYFISDRDRTMNIFVYNIRTKQTEKVTHYTDY 260

Query: 436 YASDPQ 441
               P 
Sbjct: 261 DVKFPS 266



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 99/283 (34%), Gaps = 45/283 (15%)

Query: 179 FVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           F + +    +      L     +G   + LT S        RFSP+ + +A+    D + 
Sbjct: 28  FPATNGSDIVFSYAGDLYKAPLNGGEAQKLT-SHIGYEMFARFSPDGKSIAFTGQYDGNT 86

Query: 237 LRVYLMDTRIDRAPKRIG-------NFRSMILAP-----RFSSNGKRALI--SVQKDEAM 282
             VYL+ T     P+R+        +     + P      ++ +GK  +    +      
Sbjct: 87  -EVYLIPTD-GGEPQRLTYTATNSRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDG 144

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----------DREG-KEQLYVM 331
            ++S+      +E +          SYSPD  ++ +             R G  + +++ 
Sbjct: 145 KLWSISKNGGMSEVIPLPEG--GFCSYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIY 202

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--D 389
                  + I+ +  A    P+W   G+ I F         I V      Q   +    D
Sbjct: 203 DPAAKKVENIT-NNIAQDIIPMW--IGEEIYFISDRDRTMNIFVYNIRTKQTEKVTHYTD 259

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +++ P  S +G+ +++      + G  LY +D   R    I+
Sbjct: 260 YDVKFP--SSNGQIIVY------EHGGYLYKLDPKTRKSEKIS 294



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 106/319 (33%), Gaps = 39/319 (12%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFR--LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           A  L    +  +G  RL V  R  ++DV   K +      +  A+ R+            
Sbjct: 312 ADNLTAASLSPDGH-RLAVTARGEVFDVPAEKGVTRDITRTPGANERE------------ 358

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
             GE      +I ++S+       +  + +   +G +   LT + D  + +  +SP+ +K
Sbjct: 359 --GEWSPNGKQIAYISDRTG----ETEIWLQSVEGGDPIQLTQNNDTYIRQLMWSPDSKK 412

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDI 284
           + Y    +    R+  +D         + N         +S + +    +    +    I
Sbjct: 413 ILYTDRKN----RIVEVDIASKAKRTVMQNPEGEFYEVNYSPDSQWITYTKSGANNMSVI 468

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRIS 342
           Y   L S     +T   + + S  +S D   ++F S+R+              +    + 
Sbjct: 469 YVYHLTSGKEYPVTEKWYNSSSPVFSTDGKYLIFNSERDFNPIYSQTEWNHAYNRMGGVY 528

Query: 343 QDKEASYFDPVWSPQGDLI--------AFTKFSGEKFAIGVMKKDGSQERL--LVEDSNL 392
               A+       P  +++        A  K +        +  +G   RL  L   +  
Sbjct: 529 MAMLANDTPSPLLPSDEMVSIEQQATDAVNKKTEATNNAVKIDPEGLPGRLIKLPLQAGN 588

Query: 393 QAPTWSPSGRSLIFSRKKD 411
               +S  G+ + ++  + 
Sbjct: 589 YDNFYS-DGKKVWYASGRS 606


>gi|119503812|ref|ZP_01625894.1| hypothetical protein MGP2080_01776 [marine gamma proteobacterium
           HTCC2080]
 gi|119460320|gb|EAW41413.1| hypothetical protein MGP2080_01776 [marine gamma proteobacterium
           HTCC2080]
          Length = 665

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 55/320 (17%), Positives = 123/320 (38%), Gaps = 55/320 (17%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           D  +      G F +  L+    +   ++  S+ ++   G     +T         P++S
Sbjct: 34  DASEISVSPDGQFVAYTLY-ERDLEQDLVTTSVWMIPTAGGPAVPMTAGNGN-SHTPKWS 91

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + ++  +   +  ++V+L+D R     + +   +  + +  +S  G + L+ V+   
Sbjct: 92  PDNRFLSILSDRGDQQIQVWLLD-RRGGDAQPLTALKQGVSSYEWSPTGNQILLEVKDPT 150

Query: 281 AMD---------------------------------IYSVDLQSNATERLTNTLFINISA 307
             D                                 +Y +D+ +  T +LT   F +   
Sbjct: 151 PADLDEEPRPNPRPYVIDRLQFKEDYVGYLDRYRYHLYVIDVATQKTRQLTFGDFDDSQP 210

Query: 308 SYSPDSSQIVFES------DREGKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGD 359
           S+SPD   I F S      DR    +L+++   +  S+ ++++ +       P WSP   
Sbjct: 211 SWSPDGKHIAFVSNRTEHPDRNRNTELWLLDTTAGPSEPRQLTFNSFQDA-SPTWSPDSK 269

Query: 360 LIAFTKFSGEKFAIG------VMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKD 411
            +A+T  + E   I       ++  +  + +L+   S +Q   P +S +G  L+   +  
Sbjct: 270 HLAYTTAASEDLPIYAIPQLAILNIESGESQLVASLSEVQVFNPVFSANGNDLLTITEFQ 329

Query: 412 GDTGSKLYSIDLNGRNETLI 431
           G    +L  +DL+     ++
Sbjct: 330 GQQ--QLVRVDLDTHEIEVV 347



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 91/272 (33%), Gaps = 52/272 (19%)

Query: 218 RFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRA- 272
             SP+ Q VAY  Y+    +D++   +        P             P++S + +   
Sbjct: 39  SVSPDGQFVAYTLYERDLEQDLVTTSVWMIPTAGGPAVPMTAGNGNSHTPKWSPDNRFLS 98

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------------- 317
           ++S + D+ + ++ +D +    + LT       S  +SP  +QI+               
Sbjct: 99  ILSDRGDQQIQVWLLDRRGGDAQPLTALKQGVSSYEWSPTGNQILLEVKDPTPADLDEEP 158

Query: 318 ------FESDR------------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 +  DR              +  LYV+       ++++   +     P WSP G 
Sbjct: 159 RPNPRPYVIDRLQFKEDYVGYLDRYRYHLYVIDVATQKTRQLTF-GDFDDSQPSWSPDGK 217

Query: 360 LIAFTKF------SGEKFAIGVMKKDGS--QERLLV-EDSNLQAPTWSPSGRSLIFSRKK 410
            IAF               + ++       + R L        +PTWSP  + L ++   
Sbjct: 218 HIAFVSNRTEHPDRNRNTELWLLDTTAGPSEPRQLTFNSFQDASPTWSPDSKHLAYTTAA 277

Query: 411 DGD----TGSKLYSIDLNGRNETLINTPAYAS 438
             D       +L  +++      L+ + +   
Sbjct: 278 SEDLPIYAIPQLAILNIESGESQLVASLSEVQ 309



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 105/299 (35%), Gaps = 51/299 (17%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----------- 227
           F+S     G  +  + ++DR G + + LT  +  +     +SP   ++            
Sbjct: 96  FLSILSDRGDQQIQVWLLDRRGGDAQPLTALKQGVSSY-EWSPTGNQILLEVKDPTPADL 154

Query: 228 ---------------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                                Y  Y D     +Y++D    +  +++         P +S
Sbjct: 155 DEEPRPNPRPYVIDRLQFKEDYVGYLDRYRYHLYVIDVAT-QKTRQLTFGDFDDSQPSWS 213

Query: 267 SNGKRALISVQKDEAMD------IYSVDLQSN--ATERLTNTLFINISASYSPDSSQIVF 318
            +GK       + E  D      ++ +D  +      +LT   F + S ++SPDS  + +
Sbjct: 214 PDGKHIAFVSNRTEHPDRNRNTELWLLDTTAGPSEPRQLTFNSFQDASPTWSPDSKHLAY 273

Query: 319 ESDREGK------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +            QL ++     + + ++   E   F+PV+S  G+ +        +  
Sbjct: 274 TTAASEDLPIYAIPQLAILNIESGESQLVASLSEVQVFNPVFSANGNDLLTITEFQGQQQ 333

Query: 373 IGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +  +  D  + E +L +   +     +P G+  +++         ++++++       L
Sbjct: 334 LVRVDLDTHEIEVVLGQQDVVSDFDEAPDGQ--LYALINRPQYPGEIFTVNKESSWVQL 390



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 111/286 (38%), Gaps = 27/286 (9%)

Query: 125 RVEFRLWDVKDR--KQIIGKKFFSSPASWRKIAHTI---------SDDIYQSITGEKGDF 173
           +++  L D +    + +   K   S   W    + I         +D   +     +   
Sbjct: 107 QIQVWLLDRRGGDAQPLTALKQGVSSYEWSPTGNQILLEVKDPTPADLDEEPRPNPRPYV 166

Query: 174 NSRILFVSESVVS-GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
             R+ F  + V      +  L V+D      R LT   D    +P +SP+ + +A+ +  
Sbjct: 167 IDRLQFKEDYVGYLDRYRYHLYVIDVATQKTRQLTFG-DFDDSQPSWSPDGKHIAFVSNR 225

Query: 233 DEDILR-----VYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY- 285
            E   R     ++L+DT      P+++        +P +S + K    +    E + IY 
Sbjct: 226 TEHPDRNRNTELWLLDTTAGPSEPRQLTFNSFQDASPTWSPDSKHLAYTTAASEDLPIYA 285

Query: 286 -----SVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                 ++++S  ++ + +   + + +  +S + + ++  ++ +G++QL  +  +  + +
Sbjct: 286 IPQLAILNIESGESQLVASLSEVQVFNPVFSANGNDLLTITEFQGQQQLVRVDLDTHEIE 345

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            +   ++    D   +P G L A          I  + K+ S  +L
Sbjct: 346 VVLGQQDV-VSDFDEAPDGQLYALINRPQYPGEIFTVNKESSWVQL 390



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 72/225 (32%), Gaps = 29/225 (12%)

Query: 122 DRLRVEFRLWDVKDRK--QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           DR R    + DV  +K  Q+    F  S  SW                   G     I F
Sbjct: 181 DRYRYHLYVIDVATQKTRQLTFGDFDDSQPSW----------------SPDG---KHIAF 221

Query: 180 VSESV--VSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED- 235
           VS             L ++D   G +              P +SP+ + +AY T   ED 
Sbjct: 222 VSNRTEHPDRNRNTELWLLDTTAGPSEPRQLTFNSFQDASPTWSPDSKHLAYTTAASEDL 281

Query: 236 ----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
               I ++ +++     +          +  P FS+NG   L   +      +  VDL +
Sbjct: 282 PIYAIPQLAILNIESGESQLVASLSEVQVFNPVFSANGNDLLTITEFQGQQQLVRVDLDT 341

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +  E +     +      +PD       +  +   +++ +    S
Sbjct: 342 HEIEVVLGQQDVVSDFDEAPDGQLYALINRPQYPGEIFTVNKESS 386



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 9/111 (8%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVED-SNLQA 394
           +        +   SP G  +A+T +  +        ++ ++   G     +     N   
Sbjct: 28  TYLHMQDASEISVSPDGQFVAYTLYERDLEQDLVTTSVWMIPTAGGPAVPMTAGNGNSHT 87

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
           P WSP  R L     + GD   +++ +D  G + + L       S  +W  
Sbjct: 88  PKWSPDNRFLSILSDR-GDQQIQVWLLDRRGGDAQPLTALKQGVSSYEWSP 137


>gi|294777459|ref|ZP_06742910.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           vulgatus PC510]
 gi|294448527|gb|EFG17076.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           vulgatus PC510]
          Length = 1074

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 32/202 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   + S   D    +Y   L     ++LT+ +   + A +SPD   I F    +G  +
Sbjct: 32  NGSDIVFSYAGD----LYKAPLNGGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGNTE 87

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDP-----VWSPQGDLIAFTKFSGEKFA--IG 374
           +Y++ ++G + +R++       D       P      W+P G  I +     + F   + 
Sbjct: 88  VYLIPTDGGEPQRLTYTATNSRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGKLW 147

Query: 375 VMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSID- 422
            + K+G    +  L E       ++SP G+ L ++R            G     ++  D 
Sbjct: 148 SISKNGGMSEVIPLPEGGFC---SYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIYDP 204

Query: 423 LNGRNETLINTPAYASDPQWVG 444
              + E + N  A    P W+G
Sbjct: 205 AAKKVENITNNIAQDIIPMWIG 226



 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/326 (17%), Positives = 119/326 (36%), Gaps = 49/326 (15%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           +  +      I + I+ DI     GE+  F S                ++ V +      
Sbjct: 202 YDPAAKKVENITNNIAQDIIPMWIGEEIYFIS----------DRDRTMNIFVYNIRTKQT 251

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-- 261
             +T   D  +  P  S N Q + Y     E    +Y +D +  ++ K      S  +  
Sbjct: 252 EKVTHYTDYDVKFP--SSNGQIIVY-----EHGGYLYKLDPKTRKSEKISITLTSDNIYA 304

Query: 262 ------------APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISAS 308
                       A   S +G R  ++ +     +++ V  +   T  +T T         
Sbjct: 305 RKEMKRVADNLTAASLSPDGHRLAVTARG----EVFDVPAEKGVTRDITRTPGANEREGE 360

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SP+  QI + SDR G+ ++++    G D  +++Q+ +      +WSP    I +T    
Sbjct: 361 WSPNGKQIAYISDRTGETEIWLQSIEGGDPIQLTQNNDTYIRQLMWSPDSKKILYTDRKN 420

Query: 369 EKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               I  +      +R ++++         +SP  + + +++    +  S +Y   L   
Sbjct: 421 ---RIVEVDIASKAKRTVMQNPEGEFYEVNYSPDSQWITYTKS-GANNMSVIYVYHLTSG 476

Query: 427 NETLIN-------TPAYASDPQWVGF 445
            E  +        +P +++D +++ F
Sbjct: 477 KEYPVTEKWYNSSSPVFSTDGKYLIF 502



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 82/246 (33%), Gaps = 37/246 (15%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N   + ++     D+ +  L         +++ +     +  RFS +GK    + Q D  
Sbjct: 32  NGSDIVFSY--AGDLYKAPLN----GGEAQKLTSHIGYEMFARFSPDGKSIAFTGQYDGN 85

Query: 282 MDIYSVDLQSNATERLT-------NTLFINISA-----SYSPDSSQIVFESD-REG-KEQ 327
            ++Y +       +RLT       + L   +       +++PD   IV+ +   +G   +
Sbjct: 86  TEVYLIPTDGGEPQRLTYTATNSRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDGK 145

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----------FSGEKFAIGVM 376
           L+ +  NG   + I   +        +SP G  +A+ +             G    I + 
Sbjct: 146 LWSISKNGGMSEVIPLPEGGF---CSYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIY 202

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                +   +  + +    P W   G  + F   +D      +Y+I      +    T  
Sbjct: 203 DPAAKKVENITNNIAQDIIPMWI--GEEIYFISDRDRTMNIFVYNIRTKQTEKVTHYTDY 260

Query: 436 YASDPQ 441
               P 
Sbjct: 261 DVKFPS 266



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 99/283 (34%), Gaps = 45/283 (15%)

Query: 179 FVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           F + +    +      L     +G   + LT S        RFSP+ + +A+    D + 
Sbjct: 28  FPATNGSDIVFSYAGDLYKAPLNGGEAQKLT-SHIGYEMFARFSPDGKSIAFTGQYDGNT 86

Query: 237 LRVYLMDTRIDRAPKRIG-------NFRSMILAP-----RFSSNGKRALI--SVQKDEAM 282
             VYL+ T     P+R+        +     + P      ++ +GK  +    +      
Sbjct: 87  -EVYLIPTD-GGEPQRLTYTATNSRDDLGDRMGPNNIVMTWTPDGKNIVYRNRISDGFDG 144

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----------DREG-KEQLYVM 331
            ++S+      +E +          SYSPD  ++ +             R G  + +++ 
Sbjct: 145 KLWSISKNGGMSEVIPLPEG--GFCSYSPDGKKLAYNRVMREFRNWKYYRGGMADDIWIY 202

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--D 389
                  + I+ +  A    P+W   G+ I F         I V      Q   +    D
Sbjct: 203 DPAAKKVENIT-NNIAQDIIPMW--IGEEIYFISDRDRTMNIFVYNIRTKQTEKVTHYTD 259

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +++ P  S +G+ +++      + G  LY +D   R    I+
Sbjct: 260 YDVKFP--SSNGQIIVY------EHGGYLYKLDPKTRKSEKIS 294



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 106/319 (33%), Gaps = 39/319 (12%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFR--LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           A  L    +  +G  RL V  R  ++DV   K +      +  A+ R+            
Sbjct: 312 ADNLTAASLSPDGH-RLAVTARGEVFDVPAEKGVTRDITRTPGANERE------------ 358

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
             GE      +I ++S+       +  + +   +G +   LT + D  + +  +SP+ +K
Sbjct: 359 --GEWSPNGKQIAYISDRTG----ETEIWLQSIEGGDPIQLTQNNDTYIRQLMWSPDSKK 412

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDI 284
           + Y    +    R+  +D         + N         +S + +    +    +    I
Sbjct: 413 ILYTDRKN----RIVEVDIASKAKRTVMQNPEGEFYEVNYSPDSQWITYTKSGANNMSVI 468

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRIS 342
           Y   L S     +T   + + S  +S D   ++F S+R+              +    + 
Sbjct: 469 YVYHLTSGKEYPVTEKWYNSSSPVFSTDGKYLIFSSERDFNPIYSQTEWNHAYNRMGGVY 528

Query: 343 QDKEASYFDPVWSPQGDLI--------AFTKFSGEKFAIGVMKKDGSQERL--LVEDSNL 392
               A+       P  +++        A  K +        +  +G   RL  L   +  
Sbjct: 529 MAMLANDTPSPLLPSDEMVSIEQQATDAVNKKTEATNNAVKIDPEGLPGRLIKLPLQAGN 588

Query: 393 QAPTWSPSGRSLIFSRKKD 411
               +S  G+ + ++  + 
Sbjct: 589 YDNFYS-DGKKVWYASGRS 606


>gi|188578487|ref|YP_001915416.1| transcriptional regulatory protein, C terminal [Xanthomonas oryzae
           pv. oryzae PXO99A]
 gi|188522939|gb|ACD60884.1| transcriptional regulatory protein, C terminal [Xanthomonas oryzae
           pv. oryzae PXO99A]
          Length = 772

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 11/231 (4%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               +  +       P  SP+   VAYA+   +      L+ T  +  P+ +      + 
Sbjct: 209 RPYQVITAGGGFDLTPSLSPDGAMVAYASLTGDRTGTSILVKTTDNAYPRVLETPAPGVS 268

Query: 262 A--PRFSSNGKRALISVQK-DEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQI 316
              P +S +G+    S Q  D +  +        A  R  +       +S S+SPD+  +
Sbjct: 269 DRLPAWSPDGREIAFSRQAPDGSCRVMIAAATGPAAAREVVRCDRADMLSFSWSPDARAL 328

Query: 317 VFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFA 372
           +F S     G  ++  +       + ++   +A  FD  P +SP G  I F +       
Sbjct: 329 LFGSMTGSYGAARIRRLNLETGQWQTLNYPAQAGDFDYAPRYSPDGHWIVFLRNPQLGDL 388

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +  + G+ ERL  + +++   +W P G  +IF R+   D  ++LY +DL
Sbjct: 389 WRIPAEGGAAERLTHDTADIWGWSWLPDGSGVIFGRRV--DIEARLYRLDL 437



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 57/317 (17%), Positives = 106/317 (33%), Gaps = 60/317 (18%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           S+       S+ V   D A  R L TP+       P +SP+ +++A++    +   RV +
Sbjct: 237 SLTGDRTGTSILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGREIAFSRQAPDGSCRVMI 296

Query: 242 MDTRIDRAPKRIGN-FRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLT 298
                  A + +    R+ +L+  +S + +  L         A  I  ++L++   + L 
Sbjct: 297 AAATGPAAAREVVRCDRADMLSFSWSPDARALLFGSMTGSYGAARIRRLNLETGQWQTL- 355

Query: 299 NTLF----INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           N        + +  YSPD   IVF  + +    L+ + + G   +R++ D    +    W
Sbjct: 356 NYPAQAGDFDYAPRYSPDGHWIVFLRNPQ-LGDLWRIPAEGGAAERLTHDTADIWGW-SW 413

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKK------------------------------------ 378
            P G  + F +    +  +  +                                      
Sbjct: 414 LPDGSGVIFGRRVDIEARLYRLDLLDRSLHDLGVDDAQAPDVAHGHLVFAQRKPQFGVYQ 473

Query: 379 ------DGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR---N 427
                 +G   + RL         P  +P GR L+F+  + G  G     +   G     
Sbjct: 474 VIRDTMNGGYIRRRLFSSSGRDDQPMIAPDGRQLVFASNRSGTYGLWWGDVSKPGSVRLI 533

Query: 428 ETLINTPAYASDPQWVG 444
           E L      A+D  W  
Sbjct: 534 EGLRPDSRQAAD--WSA 548



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 73/233 (31%), Gaps = 16/233 (6%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMD 283
           ++ +         +   +     R  + I       L P  S +G      S+  D    
Sbjct: 186 QIMWRRVPASGAAQASAVLGSPKRPYQVITAGGGFDLTPSLSPDGAMVAYASLTGDRTGT 245

Query: 284 IYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQK 339
              V    NA  R+  T    +S    ++SPD  +I F     +G  ++ +  + G    
Sbjct: 246 SILVKTTDNAYPRVLETPAPGVSDRLPAWSPDGREIAFSRQAPDGSCRVMIAAATGPAAA 305

Query: 340 R-ISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLV----EDSNL 392
           R + +   A      WSP    + F   +G      I  +  +  Q + L          
Sbjct: 306 REVVRCDRADMLSFSWSPDARALLFGSMTGSYGAARIRRLNLETGQWQTLNYPAQAGDFD 365

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
            AP +SP G  ++F R         L+ I   G     +           W+ 
Sbjct: 366 YAPRYSPDGHWIVFLRN---PQLGDLWRIPAEGGAAERLTHDTADIWGWSWLP 415



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 77/256 (30%), Gaps = 52/256 (20%)

Query: 213 ILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             + PR+SP+   + +       D+ R+         A +R+ +  + I    +  +G  
Sbjct: 364 FDYAPRYSPDGHWIVFLRNPQLGDLWRI----PAEGGAAERLTHDTADIWGWSWLPDGSG 419

Query: 272 ALISVQKDEAMDIYSVDLQSNAT------------------------------------- 294
            +   + D    +Y +DL   +                                      
Sbjct: 420 VIFGRRVDIEARLYRLDLLDRSLHDLGVDDAQAPDVAHGHLVFAQRKPQFGVYQVIRDTM 479

Query: 295 ------ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEA 347
                  RL ++   +     +PD  Q+VF S+R G   L+    +     R+ +  +  
Sbjct: 480 NGGYIRRRLFSSSGRDDQPMIAPDGRQLVFASNRSGTYGLWWGDVSKPGSVRLIEGLRPD 539

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSL 404
           S     WS     +  +       A    V    G   RL V           P   + L
Sbjct: 540 SRQAADWSADSQRLLVSGSDAAGHAALFEVTPSSGKVVRLPVPQPRPLQAIHLPDPDQVL 599

Query: 405 IFSRKKDGDTGSKLYS 420
           + +   DG T + LY 
Sbjct: 600 VLAAADDGHTFATLYD 615


>gi|317038874|ref|XP_003188680.1| hypothetical protein ANI_1_2282184 [Aspergillus niger CBS 513.88]
          Length = 319

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 95/258 (36%), Gaps = 51/258 (19%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRI 246
           + L + + DG+N + L  S     F   +SP+ + V + +        DI RV +  T  
Sbjct: 53  SELYIAEPDGSNAKLLLGSNSVYDFRASWSPDAKHVYFTSERRGDGQADIYRVAINGTST 112

Query: 247 -DRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFIN 304
                + + +   +  +   S +GK    +  + ++   I  + L++ + + LT    I+
Sbjct: 113 VGAEVEPVASSPGVDDSASISPDGKMLAFATSRYNQTSQIMLMVLETGSLKNLTLIPGIS 172

Query: 305 -----------ISASYSPDSSQIVFESDR----------EGKEQ-----LYVMQSNGSDQ 338
                         ++SPD   IVF SDR           G E      +Y  + NG+D 
Sbjct: 173 EAANSALPNGYFKPTWSPDGEWIVFTSDRNTPWRGHSDGSGWEHTQELSIYAARPNGTDF 232

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKF-----------------SGEKFAIGVMKKDGS 381
           + +S     +   P +SP G  + F +                  S    +I  +     
Sbjct: 233 RLVSSRSNYTQGSPRFSPNGKRLVFYEMLTEDTYNGRLQPELLEGSYLNTSIVSIDFATG 292

Query: 382 QERLL--VEDSNLQAPTW 397
            +R++    D    +P++
Sbjct: 293 GDRIVHATGDGTKISPSF 310



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 55/282 (19%), Positives = 98/282 (34%), Gaps = 57/282 (20%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +   + ++VSG          +  A  R  + +        R SPN  ++          
Sbjct: 10  LALATATLVSGASHYE----GQGHAARRAASDTYKGTFLHNRISPNYSEL---------- 55

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSN-- 292
              Y+ +     A   +G+         +S + K    + ++  D   DIY V +     
Sbjct: 56  ---YIAEPDGSNAKLLLGSNSVYDFRASWSPDAKHVYFTSERRGDGQADIYRVAINGTST 112

Query: 293 ---ATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRIS------ 342
                E + ++  ++ SAS SPD   + F + R     Q+ +M       K ++      
Sbjct: 113 VGAEVEPVASSPGVDDSASISPDGKMLAFATSRYNQTSQIMLMVLETGSLKNLTLIPGIS 172

Query: 343 ----QDKEASYFDPVWSPQGDLIAFTKFSGEKFA---------------IGVMKKDGSQE 383
                     YF P WSP G+ I FT      +                I   + +G+  
Sbjct: 173 EAANSALPNGYFKPTWSPDGEWIVFTSDRNTPWRGHSDGSGWEHTQELSIYAARPNGTDF 232

Query: 384 RLLVEDSNL--QAPTWSPSGRSLIFSR-----KKDGDTGSKL 418
           RL+   SN    +P +SP+G+ L+F         +G    +L
Sbjct: 233 RLVSSRSNYTQGSPRFSPNGKRLVFYEMLTEDTYNGRLQPEL 274



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 71/197 (36%), Gaps = 35/197 (17%)

Query: 283 DIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNG---- 335
           ++Y  +   +  + L  +    +  AS+SPD+  + F S+R G  Q  +Y +  NG    
Sbjct: 54  ELYIAEPDGSNAKLLLGSNSVYDFRASWSPDAKHVYFTSERRGDGQADIYRVAINGTSTV 113

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVE------ 388
             +                SP G ++AF T    +   I +M  +    + L        
Sbjct: 114 GAEVEPVASSPGVDDSASISPDGKMLAFATSRYNQTSQIMLMVLETGSLKNLTLIPGISE 173

Query: 389 ------DSNLQAPTWSPSGRSLIFSRKKDGDTGS-------------KLYSIDLNGRNET 429
                  +    PTWSP G  ++F+  ++                   +Y+   NG +  
Sbjct: 174 AANSALPNGYFKPTWSPDGEWIVFTSDRNTPWRGHSDGSGWEHTQELSIYAARPNGTDFR 233

Query: 430 LINTPAY--ASDPQWVG 444
           L+++ +      P++  
Sbjct: 234 LVSSRSNYTQGSPRFSP 250



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 54/145 (37%), Gaps = 25/145 (17%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQ- 382
            +LY+ + +GS+ K +        F   WSP    + FT  +    +  I  +  +G+  
Sbjct: 53  SELYIAEPDGSNAKLLLGSNSVYDFRASWSPDAKHVYFTSERRGDGQADIYRVAINGTST 112

Query: 383 -----ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG--RNETLINT-- 433
                E +        + + SP G+ L F+  +   T   +  +   G  +N TLI    
Sbjct: 113 VGAEVEPVASSPGVDDSASISPDGKMLAFATSRYNQTSQIMLMVLETGSLKNLTLIPGIS 172

Query: 434 -------------PAYASDPQWVGF 445
                        P ++ D +W+ F
Sbjct: 173 EAANSALPNGYFKPTWSPDGEWIVF 197



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 2/64 (3%)

Query: 365 KFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           + S     + + + DGS  +LL           +WSP  + + F+ ++ GD  + +Y + 
Sbjct: 47  RISPNYSELYIAEPDGSNAKLLLGSNSVYDFRASWSPDAKHVYFTSERRGDGQADIYRVA 106

Query: 423 LNGR 426
           +NG 
Sbjct: 107 INGT 110


>gi|329957533|ref|ZP_08298008.1| WD40-like protein [Bacteroides clarus YIT 12056]
 gi|328522410|gb|EGF49519.1| WD40-like protein [Bacteroides clarus YIT 12056]
          Length = 1089

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 90/247 (36%), Gaps = 37/247 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S    P +S +GK+   +  +
Sbjct: 30  ISPDGTEIAFCY--KGDIYKV----PAKGGTAIQLTTQESYESTPVWSPDGKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
               D++ +       +RLT      I ++++PD   I+F +            R    +
Sbjct: 84  YGNFDVFVMPANGGTAQRLTTHSAGEIPSAFTPDGKYILFSAAIQDPAESALFPRSAMTE 143

Query: 328 LYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIG 374
           LY +   G   +++     EA  FD      G+L  +               S     I 
Sbjct: 144 LYKVPVTGGRTEQVLGTPAEAVCFDKS----GELFFYQDQKGFEDQWRKHHTSSVTRDIW 199

Query: 375 VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +      +   L +     + P  SP G+ L F  ++DG +   +Y+  LN R E +   
Sbjct: 200 MYDARTGKHANLTQRAGEDRNPVLSPDGQELYFLSERDGGS-FNVYAFPLN-RPEAVKAV 257

Query: 434 PAYASDP 440
            ++ + P
Sbjct: 258 TSFKTHP 264



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 65/356 (18%), Positives = 130/356 (36%), Gaps = 56/356 (15%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISD-----DIYQSITGEKGDFNSRILFVSESVV 185
           +D K  +    +        WRK  H  S       +Y + TG+  +   R       V+
Sbjct: 167 FD-KSGELFFYQDQKGFEDQWRK--HHTSSVTRDIWMYDARTGKHANLTQRAGEDRNPVL 223

Query: 186 SGIIKNSLCVMDRDGAN-------------IRYLTPSRDQILFEPRFSPNQ------QKV 226
           S   +    + +RDG +             ++ +T  +   +     S N          
Sbjct: 224 SPDGQELYFLSERDGGSFNVYAFPLNRPEAVKAVTSFKTHPVRFLSISNNGTLCYGYDGE 283

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y   ++ +  +V +  TR DR      N+ S   +   S +GK+     +     +++ 
Sbjct: 284 IYTQQNNSEPQKVRIEITRDDRPQIARLNYTSGATSATVSPDGKQIAFIARG----EVFV 339

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------- 337
                  T+++T+T     S S++PD+  + + S+R G  QLY+ +    +         
Sbjct: 340 TSADYATTKQITHTPANESSLSFAPDNRTLAYASERNGNWQLYLAKIARKEEPNFPNATL 399

Query: 338 --QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-- 393
             ++ +          P +SP G  +AF +   ++  + V+  D  + R + + S     
Sbjct: 400 IKEEALLPSATVERTCPQFSPDGKELAFIE---DRIRLMVLNLDTKKVRRITDGSTWYST 456

Query: 394 ----APTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNET--LINTPAYASDPQ 441
               +  WSP G+   L F   +  D  S +  +   G +    L N+   +  P+
Sbjct: 457 DGEFSYAWSPDGKWFTLEFIGNRH-DPYSDIGLVSAQGNSPIVNLTNSGYMSGSPR 511



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 87/255 (34%), Gaps = 32/255 (12%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
             ++   S   K  + +   D    +    +          SP+ +++A+    +     
Sbjct: 284 IYTQQNNSEPQKVRIEITRDD--RPQIARLNYTSGATSATVSPDGKQIAFIARGE----- 336

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
              + +      K+I +  +   +  F+ + +    + +++    +Y   +         
Sbjct: 337 -VFVTSADYATTKQITHTPANESSLSFAPDNRTLAYASERNGNWQLYLAKIARKEEPNFP 395

Query: 299 NTLFINIS------------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           N   I                 +SPD  ++ F  DR    +L V+  +    +RI+    
Sbjct: 396 NATLIKEEALLPSATVERTCPQFSPDGKELAFIEDRI---RLMVLNLDTKKVRRITDGST 452

Query: 347 ASY----FDPVWSPQGDL--IAFTKFSGEKF-AIGVMKKDGSQERL-LVEDSNLQ-APTW 397
                  F   WSP G    + F     + +  IG++   G+   + L     +  +P +
Sbjct: 453 WYSTDGEFSYAWSPDGKWFTLEFIGNRHDPYSDIGLVSAQGNSPIVNLTNSGYMSGSPRF 512

Query: 398 SPSGRSLIFSRKKDG 412
           +  G +++F  ++ G
Sbjct: 513 ALDGNAILFKTERYG 527



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 104/299 (34%), Gaps = 48/299 (16%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT  ++     P +SP+ +++A+A+    +   V++M      
Sbjct: 41  YKGDIYKVPAKGGTAIQLTT-QESYESTPVWSPDGKQIAFASDRYGN-FDVFVMPAN-GG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERL 297
             +R+    +  +   F+ +GK  L S             +    ++Y V +    TE++
Sbjct: 98  TAQRLTTHSAGEIPSAFTPDGKYILFSAAIQDPAESALFPRSAMTELYKVPVTGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T      A     S ++ F  D++G                +++  +       ++Q 
Sbjct: 158 LGTPA---EAVCFDKSGELFFYQDQKGFEDQWRKHHTSSVTRDIWMYDARTGKHANLTQ- 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW---SPS 400
           +     +PV SP G  + F ++  G  F +     +  +    V         +   S +
Sbjct: 214 RAGEDRNPVLSPDGQELYFLSERDGGSFNVYAFPLNRPEAVKAVTSFKTHPVRFLSISNN 273

Query: 401 GRSL------IFSRKKDGDTGSKLYSIDLNGRNE--TLINTPAY-----ASDPQWVGFM 446
           G         I++++ + +       I  + R +   L  T        + D + + F+
Sbjct: 274 GTLCYGYDGEIYTQQNNSEPQKVRIEITRDDRPQIARLNYTSGATSATVSPDGKQIAFI 332



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 39/100 (39%), Gaps = 14/100 (14%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
            SP G  IAF         I  +   G     L    + ++ P WSP G+ + F+  + G
Sbjct: 30  ISPDGTEIAFCYKGD----IYKVPAKGGTAIQLTTQESYESTPVWSPDGKQIAFASDRYG 85

Query: 413 DTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGF 445
           +    ++ +  NG     + T        A+  D +++ F
Sbjct: 86  NF--DVFVMPANGGTAQRLTTHSAGEIPSAFTPDGKYILF 123



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 123/348 (35%), Gaps = 55/348 (15%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V        K+   +PA+   ++    +      +   G++   +  ++          +
Sbjct: 339 VTSADYATTKQITHTPANESSLSFAPDNRTLAYASERNGNWQLYLAKIARKEEPNFPNAT 398

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L            L PS       P+FSP+ +++A+     ED +R+ +++    +  +R
Sbjct: 399 LI-------KEEALLPSATVERTCPQFSPDGKELAFI----EDRIRLMVLNLDT-KKVRR 446

Query: 253 IGNFRSM-----ILAPRFSSNGKRA---LISVQKDEAMDIYSVDLQSNAT-ERLTNTLFI 303
           I +  +        +  +S +GK      I  + D   DI  V  Q N+    LTN+ ++
Sbjct: 447 ITDGSTWYSTDGEFSYAWSPDGKWFTLEFIGNRHDPYSDIGLVSAQGNSPIVNLTNSGYM 506

Query: 304 NISASYSPDSSQIVFESDREG-----------KEQLYVMQSNGSDQKRISQDKEASY--- 349
           + S  ++ D + I+F+++R G              L  +  +  D+  +S++        
Sbjct: 507 SGSPRFALDGNAILFKTERYGMRAHASWGSQDDAMLIFLNQDAYDKYCLSKEDYELRKEL 566

Query: 350 -------FDPVWSPQGDLIAFTKFSG---------EKFAIGVMKKDGSQERLLVEDSNLQ 393
                   D   +                      +   + +   +    RL    S++ 
Sbjct: 567 EAEQKKTQDKDTAKDKKRSKKETEQEKTGNDKSQVKDIVVELKNIEDRIVRLTPNSSDMG 626

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--TPAYASD 439
           +   S  G SL +      + G  L+ +DL  ++  L++     +AS 
Sbjct: 627 SVIISKDGESLYYFA--AFEDGYDLWKMDLRKKDTRLLHKMDAGWASM 672


>gi|145593173|ref|YP_001157470.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Salinispora tropica CNB-440]
 gi|145302510|gb|ABP53092.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Salinispora tropica CNB-440]
          Length = 590

 Score =  112 bits (281), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 96/305 (31%), Gaps = 21/305 (6%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGAN 202
           +  +   W +      DDI    + +     + + F S       +    L         
Sbjct: 58  YEIATEQWHQGTRGAGDDIEAQWSPDS----ACLAFTSSRCGHKAVWLYRLHEARI---- 109

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                         P +SP+  K+ +         R   + +     P  + +      A
Sbjct: 110 --SRLTFGPYDEEYPNWSPDGSKITFV--GGGWAQRQVYLVSATGGPPMPVTDEPGRTGA 165

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             +  +G   +       A  +  + L  +   ++T+    +   + S     + F    
Sbjct: 166 CTYLPDGSGLICHSYDTGASAVSILPLDGSMPRQVTDGSTWDYKPTVSSAHPVVAFSRSL 225

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           EG+  ++V Q     + R    +      P W+  G  + F +       I V+ +    
Sbjct: 226 EGRSVIWVQQLAEPYRGRALVVEAGDDRWPNWTADGQHLFFHRLVDRGVGIWVLDRRTDT 285

Query: 383 ERLLVEDSNLQAPTW---SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
              +V     + P +   SP G  LI++ ++ G +  K+  I   G    ++     A+ 
Sbjct: 286 VTQVV--GPDEQPRYGNISPDGTRLIYAAEESGRSVVKVREIS--GGLTKVLPL-GDAAF 340

Query: 440 PQWVG 444
           PQW  
Sbjct: 341 PQWSP 345



 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 78/202 (38%), Gaps = 8/202 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILR---VYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKR 271
            P++SPN + VAY T D          Y + T           +   +  P  +S +  R
Sbjct: 340 FPQWSPNGRTVAYLTRDVSRPRWEIATYDLATATSTVWTCGVTWPKSLHGPLDWSPDSTR 399

Query: 272 ALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQL 328
            + S   +    D+  +DL+  +  +LT   + + + S++PD + +VF S R G      
Sbjct: 400 LVFSTDTEPFEADLCVLDLRDGSVTKLTEDPWWDEAPSWTPDGTGVVFLSTRGGDWTWGF 459

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y M  +  +   +++       +P   P G LI ++        +     DG    L   
Sbjct: 460 YRMDLSTGEIHALARPDYIEKNNPRMLPDGTLI-YSLAVSGIEDLFEQLPDGRGRVLSSV 518

Query: 389 DSNLQAPTWSPSGRSLIFSRKK 410
              ++ P  S  G  L F+R  
Sbjct: 519 GPAVRYPVPSRDGSMLAFTRTH 540



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 81/229 (35%), Gaps = 6/229 (2%)

Query: 218 RFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             SP+  +   ++     + L  Y + T       R        +  ++S +      + 
Sbjct: 35  AISPDGTRFVASSRRTGSLNLWFYEIATEQWHQGTRGA---GDDIEAQWSPDSACLAFTS 91

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +     ++   L      RLT   +     ++SPD S+I F      + Q+Y++ + G 
Sbjct: 92  SRCGHKAVWLYRLHEARISRLTFGPYDEEYPNWSPDGSKITFVGGGWAQRQVYLVSATGG 151

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-P 395
               ++ D+        + P G  +    +     A+ ++  DGS  R + + S     P
Sbjct: 152 PPMPVT-DEPGRTGACTYLPDGSGLICHSYDTGASAVSILPLDGSMPRQVTDGSTWDYKP 210

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           T S +   + FSR  +G +   +  +    R   L+        P W  
Sbjct: 211 TVSSAHPVVAFSRSLEGRSVIWVQQLAEPYRGRALVVEAGDDRWPNWTA 259



 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 75/185 (40%), Gaps = 4/185 (2%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+    +       S +G R + S ++  +++++  ++ +    + T     +I A +SP
Sbjct: 23  RLAEDPAGAGDGAISPDGTRFVASSRRTGSLNLWFYEIATEQWHQGTRGAGDDIEAQWSP 82

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           DS+ + F S R G + +++ + + +   R++         P WSP G  I F      + 
Sbjct: 83  DSACLAFTSSRCGHKAVWLYRLHEARISRLTF-GPYDEEYPNWSPDGSKITFVGGGWAQR 141

Query: 372 AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            + ++   G     + +      A T+ P G  LI      G +   +  + L+G     
Sbjct: 142 QVYLVSATGGPPMPVTDEPGRTGACTYLPDGSGLICHSYDTGASAVSI--LPLDGSMPRQ 199

Query: 431 INTPA 435
           +   +
Sbjct: 200 VTDGS 204



 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 97/261 (37%), Gaps = 20/261 (7%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           ++  DG+  R +T       ++P  S     VA+ +   E    +++         + + 
Sbjct: 189 ILPLDGSMPRQVTDG-STWDYKPTVSSAHPVVAF-SRSLEGRSVIWVQQLAEPYRGRALV 246

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY---SP 311
                   P ++++G+        D  + I+ +D +++   ++   +  +    Y   SP
Sbjct: 247 VEAGDDRWPNWTADGQHLFFHRLVDRGVGIWVLDRRTDTVTQV---VGPDEQPRYGNISP 303

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGE 369
           D +++++ ++  G+  + V + +G   K +          P WSP G  +A+     S  
Sbjct: 304 DGTRLIYAAEESGRSVVKVREISGGLTKVL---PLGDAAFPQWSPNGRTVAYLTRDVSRP 360

Query: 370 KFAIGVMKKDGSQERLLVEDSNL----QAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL- 423
           ++ I       +   +             P  WSP    L+FS   +    + L  +DL 
Sbjct: 361 RWEIATYDLATATSTVWTCGVTWPKSLHGPLDWSPDSTRLVFSTDTE-PFEADLCVLDLR 419

Query: 424 NGRNETLINTPAYASDPQWVG 444
           +G    L   P +   P W  
Sbjct: 420 DGSVTKLTEDPWWDEAPSWTP 440



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 90/232 (38%), Gaps = 19/232 (8%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF---SSNGKRA 272
            P ++ + Q + +    D   + ++++D R D   + +G        PR+   S +G R 
Sbjct: 254 WPNWTADGQHLFFHRLVDRG-VGIWVLDRRTDTVTQVVGPDEQ----PRYGNISPDGTRL 308

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--LYV 330
           + + ++     +   ++    T+ L   L       +SP+   + + +    + +  +  
Sbjct: 309 IYAAEESGRSVVKVREISGGLTKVL--PLGDAAFPQWSPNGRTVAYLTRDVSRPRWEIAT 366

Query: 331 MQSNGSDQK----RISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKK-DGSQER 384
                +        ++  K   +    WSP    + F+      +  + V+   DGS  +
Sbjct: 367 YDLATATSTVWTCGVTWPKS-LHGPLDWSPDSTRLVFSTDTEPFEADLCVLDLRDGSVTK 425

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           L  +    +AP+W+P G  ++F   + GD     Y +DL+      +  P Y
Sbjct: 426 LTEDPWWDEAPSWTPDGTGVVFLSTRGGDWTWGFYRMDLSTGEIHALARPDY 477



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 4/141 (2%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RL          + SPD ++ V  S R G   L+  +       + ++       + 
Sbjct: 20  QLHRLAEDPAGAGDGAISPDGTRFVASSRRTGSLNLWFYEIATEQWHQGTR-GAGDDIEA 78

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            WSP    +AFT       A+ + +  +    RL     + + P WSP G  + F     
Sbjct: 79  QWSPDSACLAFTSSRCGHKAVWLYRLHEARISRLTFGPYDEEYPNWSPDGSKITFVG--G 136

Query: 412 GDTGSKLYSIDLNGRNETLIN 432
           G    ++Y +   G     + 
Sbjct: 137 GWAQRQVYLVSATGGPPMPVT 157



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 62/197 (31%), Gaps = 23/197 (11%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           ++R++F +++      +  LCV+D RDG+  +            P ++P+   V + +  
Sbjct: 397 STRLVFSTDTEP---FEADLCVLDLRDGSVTKLTED--PWWDEAPSWTPDGTGVVFLSTR 451

Query: 233 DED-ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
             D     Y MD                   PR   +G   + S+      D++      
Sbjct: 452 GGDWTWGFYRMDLSTGEIHALARPDYIEKNNPRMLPDGT-LIYSLAVSGIEDLFEQLPDG 510

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY------------VMQSNGSDQK 339
                L++          S D S + F   R  +   Y            +      D +
Sbjct: 511 RG-RVLSSVGPAVRYPVPSRDGSMLAFT--RTHRTVEYWLAKNVWGAGSPIADLADGDAR 567

Query: 340 RISQDKEASYFDPVWSP 356
           R       +   PV SP
Sbjct: 568 RRGTHGPQTRTGPVRSP 584


>gi|168701004|ref|ZP_02733281.1| peptidase S41 [Gemmata obscuriglobus UQM 2246]
          Length = 657

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 84/229 (36%), Gaps = 31/229 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           ++L  P  S   + +A+   DD        +     + P+R+     +   P FS +G+ 
Sbjct: 27  RLLTMPAVSA--KNIAFVYADD------LWVADAGGKNPRRLTTDLGLEAYPVFSPDGQT 78

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----EGKEQ 327
              S Q D  +D+Y++ +   A  RLT+    +    ++PD   ++F S R        Q
Sbjct: 79  IAFSAQYDGNVDVYTIPVTGGAPTRLTSHPSPDTVRGFTPDGKSVLFSSPRHVYSNRYTQ 138

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVM 376
           L+ +   G    ++        F+  +SP GD IA+T              G    + + 
Sbjct: 139 LFTVPLTGGMPSQLPIPWG---FEAAYSPDGDYIAYTPVRDATPQWKNYRGGTHSRVWIY 195

Query: 377 KKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                +        +  N   P W   G+ L F   + GD     Y  D
Sbjct: 196 DVKTHEVVEIPQPKDRCNDLDPNWV--GKKLYFRSDRAGDYNVFCYDTD 242



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 94/243 (38%), Gaps = 23/243 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           VS   ++ +  + L V D  G N R LT     +   P FSP+ Q +A++   D + + V
Sbjct: 34  VSAKNIAFVYADDLWVADAGGKNPRRLTTDL-GLEAYPVFSPDGQTIAFSAQYDGN-VDV 91

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----DEAMDIYSVDLQSNATE 295
           Y +      AP R+ +  S      F+ +GK  L S  +    +    +++V L      
Sbjct: 92  YTIPV-TGGAPTRLTSHPSPDTVRGFTPDGKSVLFSSPRHVYSNRYTQLFTVPLTGGMPS 150

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQ-----------LYVMQSNGSDQKRISQD 344
           +L         A+YSPD   I +   R+   Q           +++      +   I Q 
Sbjct: 151 QLPIPWGF--EAAYSPDGDYIAYTPVRDATPQWKNYRGGTHSRVWIYDVKTHEVVEIPQP 208

Query: 345 KEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
           K+  +  DP W   G  + F       + +     D    + + + ++      +  G++
Sbjct: 209 KDRCNDLDPNWV--GKKLYFRSDRAGDYNVFCYDTDNKDVKAVTKFTDFPVLDINTDGKT 266

Query: 404 LIF 406
           LIF
Sbjct: 267 LIF 269



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 88/219 (40%), Gaps = 22/219 (10%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +      +  R       +     S +G R  +  +     +I +V  +      LTNT 
Sbjct: 292 IAIDNSESRPRFAKGSKYVRDVSVSPSGSRVAVEFRG----EIVTVPAEKGDARVLTNTP 347

Query: 302 FI-NISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGD 359
            +   + ++SPD   I + SD  G+ QL +   NG  + K++       YFDPVWS    
Sbjct: 348 DVHERNPAWSPDGKTIAYFSDAGGEYQLVLAPQNGKGEPKKVKLSGNGFYFDPVWSRDSK 407

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-----DSNLQAPTWSPSGRSLIFSRKKDGDT 414
            + F   +   F + V   +  +   +VE        L+  +WSP  + +++S       
Sbjct: 408 KLLFRDNAQTVFYLEV---ESGKITKVVEPKHGLGRGLKPSSWSPDSKWVVYSINTPAQI 464

Query: 415 GSKLYSIDLN-GRNETLINTPAYASDPQ------WVGFM 446
            S++Y+  L  G +  + +    A+DP       +V F+
Sbjct: 465 -SRVYAYSLEKGTSTPITDGLTEATDPAFDAGGKYVYFL 502



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 82/226 (36%), Gaps = 18/226 (7%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +  S S V+   +  +  +  +  + R LT + D     P +SP+ + +AY +    +  
Sbjct: 315 VSPSGSRVAVEFRGEIVTVPAEKGDARVLTNTPDVHERNPAWSPDGKTIAYFSDAGGEYQ 374

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V           K   +       P +S + K+ L    +D A  ++ ++++S    ++
Sbjct: 375 LVLAPQNGKGEPKKVKLSGNGFYFDPVWSRDSKKLLF---RDNAQTVFYLEVESGKITKV 431

Query: 298 T---NTLFINISA-SYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDP 352
               + L   +   S+SPDS  +V+  +   +  ++Y           I+ D      DP
Sbjct: 432 VEPKHGLGRGLKPSSWSPDSKWVVYSINTPAQISRVYAYSLEKGTSTPIT-DGLTEATDP 490

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            +   G  + F   S    +     +  +  R          P WS
Sbjct: 491 AFDAGGKYVYFLGSSDTGMSKHGFSQSAADSRQ---------PRWS 527


>gi|218265125|ref|ZP_03478707.1| hypothetical protein PRABACTJOHN_04417 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221580|gb|EEC94230.1| hypothetical protein PRABACTJOHN_04417 [Parabacteroides johnsonii
           DSM 18315]
          Length = 1088

 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 74/205 (36%), Gaps = 30/205 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S NG+    + + D    IY+V        +LT     +    +SPD S+IVF SDR
Sbjct: 29  PAISPNGETIAFTYKGD----IYTVPANGGKATQLTTHPAHDTRPVWSPDGSKIVFASDR 84

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF- 371
            G   ++VM   G   K+++    A+ +   +S     I +          ++F   +F 
Sbjct: 85  NGNFDIFVMDKEGGSPKQLTT-HSANEYPETFS-DAKHILYSAAIQQDTKDSQFPSGQFP 142

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF----------SRKKDGDTGSKLYSI 421
            I  +  DG +   L     +++   +  G  L++           +         ++  
Sbjct: 143 QIYRISLDGGRPE-LYSSLAMESLALNKKGDKLLYQDKKGYEDPWRKHHQSSITRDIWLC 201

Query: 422 DLNGRN--ETLINTPAYASDPQWVG 444
            L      + + +      +P W  
Sbjct: 202 TLGPERSFQKITSFKGEDRNPVWAA 226



 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 90/252 (35%), Gaps = 37/252 (14%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           L  +    +  P  SPN + +A+      DI  V            ++    +    P +
Sbjct: 18  LAENDPLWMRYPAISPNGETIAFTY--KGDIYTV----PANGGKATQLTTHPAHDTRPVW 71

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----- 320
           S +G + + +  ++   DI+ +D +  + ++LT         ++S D+  I++ +     
Sbjct: 72  SPDGSKIVFASDRNGNFDIFVMDKEGGSPKQLTTHSANEYPETFS-DAKHILYSAAIQQD 130

Query: 321 -----DREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------- 363
                   G+  Q+Y +  +G   +  S     S      + +GD + +           
Sbjct: 131 TKDSQFPSGQFPQIYRISLDGGRPELYSSLAMESL---ALNKKGDKLLYQDKKGYEDPWR 187

Query: 364 -TKFSGEKFAIGVMK--KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               S     I +     + S +++       + P W+  G S  +  ++ G     ++ 
Sbjct: 188 KHHQSSITRDIWLCTLGPERSFQKITSFKGEDRNPVWAADGSSFYYLSEEKGSF--NIFK 245

Query: 421 IDLNGRNETLIN 432
            DL G++   I 
Sbjct: 246 NDLTGKSSRQIT 257



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 56/304 (18%), Positives = 109/304 (35%), Gaps = 44/304 (14%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ EKG FN     + ++ ++G     +   +     +R+LT   +  L    +  +
Sbjct: 231 FYYLSEEKGSFN-----IFKNDLTGKSSRQI--TNHTTHPVRFLTSDSNGNLC---YGYD 280

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQKDEA 281
            +   Y   +     +V +           I   + S       S NGK     V+ D  
Sbjct: 281 GE--IYTVKEGAQPKKVDVRIISDKVENDLIHQLKTSGATDIAISPNGKEVAFIVRGD-- 336

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +Y   +    T+++TNT        +SPD   +V+ ++R     +Y       D K  
Sbjct: 337 --VYVTSVDYETTKQITNTPQQERDLDFSPDGRSLVYSAERGETWGVYQSSLVRKDDKYF 394

Query: 342 SQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS- 390
           +  +E           + F P++SP G  +AF +       + V+     Q R +++   
Sbjct: 395 TYAQELKEEPLVVTSQTSFQPMYSPDGKEVAFLENRTT---LRVINLKSKQVRTVLDGKY 451

Query: 391 ------NLQAPTWSPSGRSLIFSRKK---DGDTGSKLYSIDLNGRNE--TLINTPAYASD 439
                   Q   WSP  +   F  K     G   + +  +  +G  E   L  +    ++
Sbjct: 452 NYSYADGDQHYQWSPDSKW--FLAKYIAVGGWNNTDIVLVKADGSGEMTNLTESGYSDNN 509

Query: 440 PQWV 443
            +WV
Sbjct: 510 AKWV 513



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/237 (21%), Positives = 81/237 (34%), Gaps = 37/237 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN ++VA+    D     VY+         K+I N         FS +G+  + S +
Sbjct: 321 AISPNGKEVAFIVRGD-----VYVTSVDY-ETTKQITNTPQQERDLDFSPDGRSLVYSAE 374

Query: 278 KDEAMDIYSVDL-----------QSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           + E   +Y   L           Q    E L  T   +    YSPD  ++ F  +R    
Sbjct: 375 RGETWGVYQSSLVRKDDKYFTYAQELKEEPLVVTSQTSFQPMYSPDGKEVAFLENRT--- 431

Query: 327 QLYVMQSNGSDQKRISQDKEASYFD-----PVWSPQGDLIA--FTKFSG-EKFAIGVMKK 378
            L V+       + +   K    +        WSP        +    G     I ++K 
Sbjct: 432 TLRVINLKSKQVRTVLDGKYNYSYADGDQHYQWSPDSKWFLAKYIAVGGWNNTDIVLVKA 491

Query: 379 DGSQE-RLLVEDS-NLQAPTWSPSGRSLIFSRKKDG-------DTGSKLYSIDLNGR 426
           DGS E   L E   +     W   G+++I+S  + G            +Y +  +G 
Sbjct: 492 DGSGEMTNLTESGYSDNNAKWVLDGKAMIWSSDRAGYRSHGSWGAQGDVYIMFFDGE 548



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 82/229 (35%), Gaps = 31/229 (13%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  +  +  +G     LT         P +SP+  K+ +A+  + +   +++MD +  
Sbjct: 41  TYKGDIYTVPANGGKATQLTTHPAH-DTRPVWSPDGSKIVFASDRNGN-FDIFVMD-KEG 97

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATER 296
            +PK++    +      FS + K  L S               +   IY + L     E 
Sbjct: 98  GSPKQLTTHSANEYPETFS-DAKHILYSAAIQQDTKDSQFPSGQFPQIYRISLDGGRPE- 155

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---SQDKEASY---- 349
           L ++L +  S + +    +++++ D++G E  +      S  + I   +   E S+    
Sbjct: 156 LYSSLAME-SLALNKKGDKLLYQ-DKKGYEDPWRKHHQSSITRDIWLCTLGPERSFQKIT 213

Query: 350 ------FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                  +PVW+  G    +       F I      G   R +   +  
Sbjct: 214 SFKGEDRNPVWAADGSSFYYLSEEKGSFNIFKNDLTGKSSRQITNHTTH 262



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 99/319 (31%), Gaps = 92/319 (28%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---- 230
           S+I+F S+   +      + VMD++G + + LT       +   FS + + + Y+     
Sbjct: 76  SKIVFASDRNGN----FDIFVMDKEGGSPKQLTT-HSANEYPETFS-DAKHILYSAAIQQ 129

Query: 231 ------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
                 +      ++Y +     R P+   +     LA   +  G + L    K    D 
Sbjct: 130 DTKDSQFPSGQFPQIYRISLDGGR-PELYSSLAMESLA--LNKKGDKLLYQ-DKKGYEDP 185

Query: 285 YSVDLQSNATE--------------RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +    QS+ T               ++T+    + +  ++ D S   + S+ +G   ++ 
Sbjct: 186 WRKHHQSSITRDIWLCTLGPERSFQKITSFKGEDRNPVWAADGSSFYYLSEEKGSFNIFK 245

Query: 331 MQSNGSDQKRISQ-----------DKEASY------------------------------ 349
               G   ++I+            D   +                               
Sbjct: 246 NDLTGKSSRQITNHTTHPVRFLTSDSNGNLCYGYDGEIYTVKEGAQPKKVDVRIISDKVE 305

Query: 350 ------------FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-T 396
                        D   SP G  +AF         + V   D    + +      +    
Sbjct: 306 NDLIHQLKTSGATDIAISPNGKEVAFIVRGD----VYVTSVDYETTKQITNTPQQERDLD 361

Query: 397 WSPSGRSLIFSRKKDGDTG 415
           +SP GRSL++S ++    G
Sbjct: 362 FSPDGRSLVYSAERGETWG 380



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 65/153 (42%), Gaps = 16/153 (10%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            Q  F+P +SP+ ++VA+        ++ +     R     K   ++       ++S + 
Sbjct: 409 SQTSFQPMYSPDGKEVAFLENRTTLRVINLKSKQVRTVLDGKYNYSYADGDQHYQWSPDS 468

Query: 270 KRAL---ISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG- 324
           K  L   I+V      DI  V          LT + + + +A +  D   +++ SDR G 
Sbjct: 469 KWFLAKYIAVGGWNNTDIVLVKADGSGEMTNLTESGYSDNNAKWVLDGKAMIWSSDRAGY 528

Query: 325 --------KEQLYVMQSNGS--DQKRISQDKEA 347
                   +  +Y+M  +G   D+ R+S++++A
Sbjct: 529 RSHGSWGAQGDVYIMFFDGEAYDKFRLSKEEQA 561


>gi|305665561|ref|YP_003861848.1| acylaminoacyl-peptidase [Maribacter sp. HTCC2170]
 gi|88710317|gb|EAR02549.1| acylaminoacyl-peptidase [Maribacter sp. HTCC2170]
          Length = 681

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 94/276 (34%), Gaps = 55/276 (19%)

Query: 212 QILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           Q   +P+ SPN   + Y     +      +    M        +++ +  S   +P++S 
Sbjct: 36  QYASDPQISPNGDWIVYRRMRMDVMKDRAVGNLWMLKGDGSQHQKLTSRESGESSPKWSP 95

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------- 319
           +G R       DE  +IY   + S    +++   F   S  +SP  +Q+ F         
Sbjct: 96  SGDRLAFVSDTDEESEIYIYWVNSGKIAKISQLPFSPSSLVWSPKGNQLAFTMNKEKKPP 155

Query: 320 --------------------SDR------------EGKEQLYVMQSNGSDQKRISQDKEA 347
                               +DR             G   ++V+ + G   ++I+     
Sbjct: 156 VIAKMPKKPKGAKWADSPRVTDRLYHEADGRGYIKPGFTHIFVVPALGGAPRQITSGDHH 215

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKF-------AIGVMKKDGSQERLLVED-SNLQAPTWSP 399
                 WSP GD I F+    E +        +  +     + + L +       P  SP
Sbjct: 216 HRGSLSWSPGGDKIYFSANRNEDWEYNFRNSEVYEVGVQSEEIKALTDRKGPDSNPKVSP 275

Query: 400 SGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLIN 432
           +G+ + +    D     +   L+ ++ +G ++  I+
Sbjct: 276 NGKYIAYIGYDDKVQTYQVRKLHLMNADGSDKKAIS 311



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 48/329 (14%), Positives = 109/329 (33%), Gaps = 74/329 (22%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           ++   G   +    R+ DV   + +          S            +Q +T  +   +
Sbjct: 42  QISPNGDWIVYRRMRM-DVMKDRAVGNLWMLKGDGSQ-----------HQKLTSRESGES 89

Query: 175 SRILFVSES----VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR---FSPNQQKVA 227
           S     S      V     ++ + +   +   I  +     Q+ F P    +SP   ++A
Sbjct: 90  SPKWSPSGDRLAFVSDTDEESEIYIYWVNSGKIAKI----SQLPFSPSSLVWSPKGNQLA 145

Query: 228 YATYDDEDILRV--------------------------------------YLMDTRIDRA 249
           +    ++    +                                        +   +  A
Sbjct: 146 FTMNKEKKPPVIAKMPKKPKGAKWADSPRVTDRLYHEADGRGYIKPGFTHIFVVPALGGA 205

Query: 250 PKRIGNFRSMILAP-RFSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLTNTL 301
           P++I +          +S  G +   S  ++E         ++Y V +QS   + LT+  
Sbjct: 206 PRQITSGDHHHRGSLSWSPGGDKIYFSANRNEDWEYNFRNSEVYEVGVQSEEIKALTDRK 265

Query: 302 FINISASYSPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             + +   SP+   I +    +  +     +L++M ++GSD+K IS++ + S  + VW  
Sbjct: 266 GPDSNPKVSPNGKYIAYIGYDDKVQTYQVRKLHLMNADGSDKKAISENLDRSISNIVWDD 325

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + + F+        IG +   G   ++
Sbjct: 326 KSEGLYFSYDDKGNGKIGYITIKGKVSKI 354



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 5/64 (7%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGR-NETLINTPAYASDP 440
           L +      P  SP+G  +++ R +           L+ +  +G  ++ L +  +  S P
Sbjct: 32  LYDLQYASDPQISPNGDWIVYRRMRMDVMKDRAVGNLWMLKGDGSQHQKLTSRESGESSP 91

Query: 441 QWVG 444
           +W  
Sbjct: 92  KWSP 95


>gi|313205538|ref|YP_004044715.1| peptidase s41 [Riemerella anatipestifer DSM 15868]
 gi|312444854|gb|ADQ81209.1| peptidase S41 [Riemerella anatipestifer DSM 15868]
 gi|315023408|gb|EFT36418.1| putative Tricorn-like protease [Riemerella anatipestifer RA-YM]
          Length = 1079

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 80/199 (40%), Gaps = 28/199 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK+   +   D    IY+V  +  +  RLT     +    +SPD   I F SDRE
Sbjct: 30  AISPDGKKIAFTYMGD----IYAVSTEGGSAVRLTTHPAYDSDPVWSPDGKFIAFSSDRE 85

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----------FSGEKFA 372
            G +++++M S G + K+++   +A+     +S  G  I ++           F      
Sbjct: 86  NGFQRIFIMPSQGGEAKQVTFHSQAAL-PLAFSKDGKNIIYSANLQNSPQNVIFPSASIQ 144

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT----------GSKLYSID 422
           +  +  DG Q + +   S  ++ + + +G ++ +   K  +              ++  D
Sbjct: 145 LYQISIDGGQPKRIFNSST-KSISLTSNGEAMYYENIKGNENQWRKHHTSSVTRDIWRYD 203

Query: 423 LNGRNET-LINTPAYASDP 440
              +  T +IN      +P
Sbjct: 204 FKSKKHTQIINWKGEDRNP 222



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 81/232 (34%), Gaps = 33/232 (14%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +    L     SP+ +K+A+    D     +Y + T    A  R+    +    P +S 
Sbjct: 20  NNSPLWLRNIAISPDGKKIAFTYMGD-----IYAVSTEGGSAV-RLTTHPAYDSDPVWSP 73

Query: 268 NGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +GK    S  + +    I+ +  Q    +++T      +  ++S D   I++ ++ +   
Sbjct: 74  DGKFIAFSSDRENGFQRIFIMPSQGGEAKQVTFHSQAALPLAFSKDGKNIIYSANLQNSP 133

Query: 327 Q----------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------ 370
           Q          LY +  +G   KRI     +S      +  G+ + +    G +      
Sbjct: 134 QNVIFPSASIQLYQISIDGGQPKRI---FNSSTKSISLTSNGEAMYYENIKGNENQWRKH 190

Query: 371 ------FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                   I        +   ++      + P  S  G++L F  ++ G+  
Sbjct: 191 HTSSVTRDIWRYDFKSKKHTQIINWKGEDRNPVLSSDGKTLYFLSERAGNFN 242



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 111/283 (39%), Gaps = 32/283 (11%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ V+   K       +D   +RYL+ + +  +    +S + +            + V
Sbjct: 243 VFKTSVAQPSKIEQVTFHKD-FPVRYLSVANNGYI---AYSYDGEIYLSKPMGKPQKVNV 298

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            ++    ++  K +  F S   +   S +GK+  + ++     +++      N T+++T 
Sbjct: 299 NIISDVSNQQSKFMA-FSSGATSSSVSPDGKQIAMVIRG----EVFVNSTDYNTTKQITK 353

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVM------QSNGSDQKRISQDK-----EAS 348
           T       S+S D   +V+ S R+G   LY          N S+   I+++K      + 
Sbjct: 354 TAAAEQGVSFSADGRSLVYASYRDGYWDLYKASIQRKEDPNFSNATLITEEKLIPSDNSE 413

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED------SNLQAPTWSPSGR 402
              P +SP G  +AF +       I +   +  + R + +       +      WSP G+
Sbjct: 414 KMYPQYSPDGKEVAFVQNRT---HIAIYNFETKKIRKITDPKYQTERNGYINYEWSPDGK 470

Query: 403 SLIFSR-KKDGDTGSKLYSIDLNGRNET--LINTPAYASDPQW 442
            L+     +D    S +  I   G  E   + ++  + ++P+W
Sbjct: 471 WLVVQYIARDRVPYSDIGIISTEGGKEIVNITDSGYFDTNPRW 513



 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 80/220 (36%), Gaps = 30/220 (13%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ +++A     +        +++      K+I    +      FS++G+  + +  +D 
Sbjct: 325 PDGKQIAMVIRGE------VFVNSTDYNTTKQITKTAAAEQGVSFSADGRSLVYASYRDG 378

Query: 281 AMDIYSV------DLQSNATERLTNT---LFINIS---ASYSPDSSQIVFESDREGKEQL 328
             D+Y        D   +    +T        N       YSPD  ++ F  +R     +
Sbjct: 379 YWDLYKASIQRKEDPNFSNATLITEEKLIPSDNSEKMYPQYSPDGKEVAFVQNRT---HI 435

Query: 329 YVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDLIA--FTKFSGEKF-AIGVMKKDGS 381
            +        ++I+  K       Y +  WSP G  +   +       +  IG++  +G 
Sbjct: 436 AIYNFETKKIRKITDPKYQTERNGYINYEWSPDGKWLVVQYIARDRVPYSDIGIISTEGG 495

Query: 382 QERL-LVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLY 419
           +E + + +       P W+  G ++I+  ++ G      +
Sbjct: 496 KEIVNITDSGYFDTNPRWALDGNAIIWKSERYGMRNHASW 535



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/388 (15%), Positives = 116/388 (29%), Gaps = 105/388 (27%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
               ++ R   H   D            ++    F++ S         + +M   G   +
Sbjct: 51  TEGGSAVRLTTHPAYDS--------DPVWSPDGKFIAFSSDRENGFQRIFIMPSQGGEAK 102

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI--------DRAPKRIGNF 256
            +T    Q      FS + + + Y+         V      I           PKRI N 
Sbjct: 103 QVT-FHSQAALPLAFSKDGKNIIYSANLQNSPQNVIFPSASIQLYQISIDGGQPKRIFNS 161

Query: 257 RSMILAPRFSSNGKRALISVQKDE------------AMDIYSVDLQSNATERLTNTLFIN 304
            +  ++   +SNG+       K                DI+  D +S    ++ N    +
Sbjct: 162 STKSIS--LTSNGEAMYYENIKGNENQWRKHHTSSVTRDIWRYDFKSKKHTQIINWKGED 219

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKE--------ASYFDPVWS 355
            +   S D   + F S+R G   ++    +  S  ++++  K+        A+     +S
Sbjct: 220 RNPVLSSDGKTLYFLSERAGNFNVFKTSVAQPSKIEQVTFHKDFPVRYLSVANNGYIAYS 279

Query: 356 ---------------------------------------------PQGDLIAFTKFSGEK 370
                                                        P G  IA        
Sbjct: 280 YDGEIYLSKPMGKPQKVNVNIISDVSNQQSKFMAFSSGATSSSVSPDGKQIAMVIRG--- 336

Query: 371 FAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR--- 426
             + V   D +  + + + +  +   ++S  GRSL+++  +DG     LY   +  +   
Sbjct: 337 -EVFVNSTDYNTTKQITKTAAAEQGVSFSADGRSLVYASYRDGYW--DLYKASIQRKEDP 393

Query: 427 ---NETLIN----TPAYASD---PQWVG 444
              N TLI      P+  S+   PQ+  
Sbjct: 394 NFSNATLITEEKLIPSDNSEKMYPQYSP 421



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 60/172 (34%), Gaps = 25/172 (14%)

Query: 218 RFSPNQQKVAYATYDDE----------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            FS + + + YA+Y D                   +  +    K I +  S  + P++S 
Sbjct: 362 SFSADGRSLVYASYRDGYWDLYKASIQRKEDPNFSNATLITEEKLIPSDNSEKMYPQYSP 421

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTN-------TLFINISASYSPDSSQIVFE- 319
           +GK       +     I   + ++    ++T+         +IN    +SPD   +V + 
Sbjct: 422 DGKEVAFVQNR---THIAIYNFETKKIRKITDPKYQTERNGYINYE--WSPDGKWLVVQY 476

Query: 320 --SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
              DR     + ++ + G  +     D      +P W+  G+ I +      
Sbjct: 477 IARDRVPYSDIGIISTEGGKEIVNITDSGYFDTNPRWALDGNAIIWKSERYG 528



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 87/255 (34%), Gaps = 30/255 (11%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           L PS +     P++SP+ ++VA+        +  +           +    R+  +   +
Sbjct: 406 LIPSDNSEKMYPQYSPDGKEVAFVQNRTHIAIYNFETKKIRKITDPKYQTERNGYINYEW 465

Query: 266 SSNGKRALI---SVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESD 321
           S +GK  ++   +  +    DI  +  +       +T++ + + +  ++ D + I+++S+
Sbjct: 466 SPDGKWLVVQYIARDRVPYSDIGIISTEGGKEIVNITDSGYFDTNPRWALDGNAIIWKSE 525

Query: 322 REG-----------KEQLYVMQSNGSDQKRISQD-------------KEASYFDPVWSPQ 357
           R G            + +  +     D+ R++++             K  +         
Sbjct: 526 RYGMRNHASWGSMSDQMIVFLNREAYDKYRMNKEEYELLTEAEKNEKKSETEDAKDGKDD 585

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                      +   I          RL    S L     S  G+ L +      + G  
Sbjct: 586 KKETPKKDKKSKDINIEWENLSERVVRLTPNSSELGDAIISKDGKKLYYLAS--FEKGFD 643

Query: 418 LYSIDLNGRNETLIN 432
           L+  DL  R+  L++
Sbjct: 644 LWVHDLRERSTKLLS 658



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 13/67 (19%)

Query: 385 LLVEDSNLQAPTW------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYA 437
           +        +P W      SP G+ + F+          +Y++   G +   L   PAY 
Sbjct: 13  VWTSAFGNNSPLWLRNIAISPDGKKIAFTYM------GDIYAVSTEGGSAVRLTTHPAYD 66

Query: 438 SDPQWVG 444
           SDP W  
Sbjct: 67  SDPVWSP 73


>gi|162449890|ref|YP_001612257.1| hypothetical protein sce1619 [Sorangium cellulosum 'So ce 56']
 gi|161160472|emb|CAN91777.1| hypothetical protein sce1619 [Sorangium cellulosum 'So ce 56']
          Length = 408

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 89/285 (31%), Gaps = 60/285 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-------APRFSSNGKR 271
           +SP+ +K+ + +  D +      +        +R+ N +           AP  S+  + 
Sbjct: 97  WSPDGRKLVFQSTRDGNTCDQQYILDLESGEVRRVSNGQGKTTCGYFLFPAPATSAQARV 156

Query: 272 ALISVQKDEAM------------------DIYSVDLQSNATERLTNTLFINISASYSPDS 313
              S                         DIY+ +   +    L      +  A+ + D 
Sbjct: 157 LFASTHAAGEACPPKPDHSQGYVWPLDEFDIYTANADGSELRPLIQGKGYDAEATVAFDG 216

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--- 370
           S++VF S R+G  +LY  + +GSD KRI+           +SP    + +          
Sbjct: 217 SRLVFTSTRDGDIELYTAKLDGSDVKRITS-TPGYDGGAFFSPDATKLVWRASRPTGPAL 275

Query: 371 ----------------FAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRK---- 409
                             I V   DG   R +  +     AP + P  R ++F+      
Sbjct: 276 DDYRALLAKGLVRPSALEIFVAGADGQNPRPVTRNGRANFAPYFLPDSRRILFASDFSTP 335

Query: 410 --KDGDTGSKLYSIDLNGRN--------ETLINTPAYASDPQWVG 444
               G     LY +D +           E +     + S P +  
Sbjct: 336 QGARGMPNFDLYLVDSDAPPAADGVPPVERVTFYEGFDSFPMFSP 380



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 85/213 (39%), Gaps = 37/213 (17%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D   +Y  +       + +   +        + +G R + +  +D  +++Y+  L  +  
Sbjct: 183 DEFDIYTANAD-GSELRPLIQGKGYDAEATVAFDGSRLVFTSTRDGDIELYTAKLDGSDV 241

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKE-------------------QLYVMQSNG 335
           +R+T+T   +  A +SPD++++V+ + R                       +++V  ++G
Sbjct: 242 KRITSTPGYDGGAFFSPDATKLVWRASRPTGPALDDYRALLAKGLVRPSALEIFVAGADG 301

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------KFAIGVMK------KDGS 381
            + + ++++  A+ F P + P    I F               F + ++        DG 
Sbjct: 302 QNPRPVTRNGRAN-FAPYFLPDSRRILFASDFSTPQGARGMPNFDLYLVDSDAPPAADGV 360

Query: 382 Q--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
              ER+   +     P +SP+G  ++F+  + G
Sbjct: 361 PPVERVTFYEGFDSFPMFSPTGEHVVFASNRHG 393



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 14/103 (13%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-----YDDEDILRVYLMDTRI 246
            + V   DG N R +T +  +  F P F P+ +++ +A+          +    L     
Sbjct: 293 EIFVAGADGQNPRPVTRNG-RANFAPYFLPDSRRILFASDFSTPQGARGMPNFDLYLVDS 351

Query: 247 DRAP--------KRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           D  P        +R+  +      P FS  G+  + +  +  A
Sbjct: 352 DAPPAADGVPPVERVTFYEGFDSFPMFSPTGEHVVFASNRHGA 394



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           + R L          WSP GR L+F   +DG+T  + Y +DL       ++  
Sbjct: 82  ELRQLTFGGENAEAYWSPDGRKLVFQSTRDGNTCDQQYILDLESGEVRRVSNG 134


>gi|300775443|ref|ZP_07085305.1| dipeptidyl peptidase IV N [Chryseobacterium gleum ATCC 35910]
 gi|300506183|gb|EFK37319.1| dipeptidyl peptidase IV N [Chryseobacterium gleum ATCC 35910]
          Length = 1063

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 95/280 (33%), Gaps = 67/280 (23%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           +   L  P  SP+ +  AY +YD  DI RV            RI       + PR S +G
Sbjct: 22  KSYFLSSPSLSPDGKT-AYFSYD-GDIWRV----DSNGGNASRITALDGEEINPRVSPDG 75

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           K    S  +    D+Y +  +    ++LT     +   ++S DS  I F S+R      +
Sbjct: 76  KWLAFSSNQYGNYDLYVMPSEGGTIKQLTFHTGKDEIENWSWDSKTIYFTSNRNNNFGSF 135

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLI---------------------------- 361
                G   +++  +   +      +P G+ +                            
Sbjct: 136 KTTIEGKTPQKLFNNYFNNTNGLAETPAGEYLFTSSSESAHQVQRKRYKGENNPDILGYN 195

Query: 362 -------AFTKFSGEKFA-------------------IGVMKKDGSQERLLVE-DSNLQA 394
                   +T + G+ F                      + K +G ++  L + D++++ 
Sbjct: 196 PKNNTFKQYTNYEGKDFNPSVDKNGIIYFISDENNGEYNLYKIEGGKKTALTQFDTSIKK 255

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           P  S  G  +IF +        +LY+ D+  +   L+N  
Sbjct: 256 PFVSADGTKIIFEKDY------QLYTYDVASKKTRLLNVN 289



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 92/215 (42%), Gaps = 19/215 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +K+A+ +        +  +     +  +++ + +   +  ++  + +  L +   +
Sbjct: 314 SPDGKKMAFISRG------ILFVSDVEGKFAQQVTDGKERAMEVKWLKDNRTLLYNQTYN 367

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++V        ++LT  L  N S + + D S+ V+ S   G++++ ++     + 
Sbjct: 368 GYQNWFTVSADGKGQPKQLTQDLRNNRSITLNNDLSKAVYLS---GRDEVRLLDLKDFNS 424

Query: 339 KRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAP 395
             I +D+  ++ +  P +SP  + + F+     +  I +      Q   L     + + P
Sbjct: 425 TTIVKDEIWAFQNSRPSFSPNNEYVLFSAKRNFELDIFIYNIKKGQTLNLTNTGVSEEDP 484

Query: 396 TWSPSGRSLIFSRKKD------GDTGSKLYSIDLN 424
            WSP+G+ + F+  +       G   S +Y + L+
Sbjct: 485 VWSPNGKYIYFASDRTNPSYPLGMQKSNIYRMALD 519



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 50/310 (16%), Positives = 101/310 (32%), Gaps = 79/310 (25%)

Query: 200 GANIRY----LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           G N +        + +   F P    N   + + + ++     +Y ++         +  
Sbjct: 193 GYNPKNNTFKQYTNYEGKDFNPSVDKNG-IIYFISDENNGEYNLYKIE---GGKKTALTQ 248

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-----TN-----TLFINI 305
           F + I  P  S++G + +     ++   +Y+ D+ S  T  L     TN         N+
Sbjct: 249 FDTSIKKPFVSADGTKIIF----EKDYQLYTYDVASKKTRLLNVNLNTNKTLEKEQNFNV 304

Query: 306 SASYS-----PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             + S     PD  ++ F S    +  L+V    G   ++++  KE +  +  W      
Sbjct: 305 ENNISYYDVSPDGKKMAFIS----RGILFVSDVEGKFAQQVTDGKERAM-EVKWLKDNRT 359

Query: 361 IAFTKFSGEKFAIGVMKKDG-SQERLLVED------------------------------ 389
           + + +          +  DG  Q + L +D                              
Sbjct: 360 LLYNQTYNGYQNWFTVSADGKGQPKQLTQDLRNNRSITLNNDLSKAVYLSGRDEVRLLDL 419

Query: 390 ---------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                               P++SP+   ++FS K++ +    +Y+I   G+   L NT 
Sbjct: 420 KDFNSTTIVKDEIWAFQNSRPSFSPNNEYVLFSAKRNFELDIFIYNIK-KGQTLNLTNTG 478

Query: 435 AYASDPQWVG 444
               DP W  
Sbjct: 479 VSEEDPVWSP 488



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 96/302 (31%), Gaps = 44/302 (14%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           HT  D+I      E   ++S+ ++ + +  +        +   +G   + L  +      
Sbjct: 106 HTGKDEI------ENWSWDSKTIYFTSNRNNNFGSFKTTI---EGKTPQKLFNNYFNNTN 156

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP----------KRIGNFRSMILAPRF 265
               +P  + +  ++ +    ++        +             K+  N+      P  
Sbjct: 157 GLAETPAGEYLFTSSSESAHQVQRKRYKGENNPDILGYNPKNNTFKQYTNYEGKDFNPSV 216

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
             NG    IS + +   ++Y +  +      LT           S D ++I+FE D    
Sbjct: 217 DKNGIIYFISDENNGEYNLYKI--EGGKKTALTQFDTSIKKPFVSADGTKIIFEKD---- 270

Query: 326 EQLYVMQSNGSDQKRI--------------SQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            QLY         + +              + + E +      SP G  +AF        
Sbjct: 271 YQLYTYDVASKKTRLLNVNLNTNKTLEKEQNFNVENNISYYDVSPDGKKMAFISRG---- 326

Query: 372 AIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            + V   +G   + + +         W    R+L++++  +G       S D  G+ + L
Sbjct: 327 ILFVSDVEGKFAQQVTDGKERAMEVKWLKDNRTLLYNQTYNGYQNWFTVSADGKGQPKQL 386

Query: 431 IN 432
             
Sbjct: 387 TQ 388



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 10/149 (6%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             +  DG           +       + +  K  Y +    D +R+  +         + 
Sbjct: 373 FTVSADGKGQPKQLTQDLRNNRSITLNNDLSKAVYLS--GRDEVRLLDLKDFNSTTIVKD 430

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             +      P FS N +  L S +++  +DI+  +++   T  LTNT        +SP+ 
Sbjct: 431 EIWAFQNSRPSFSPNNEYVLFSAKRNFELDIFIYNIKKGQTLNLTNTGVSEEDPVWSPNG 490

Query: 314 SQIVFESDREG--------KEQLYVMQSN 334
             I F SDR          K  +Y M  +
Sbjct: 491 KYIYFASDRTNPSYPLGMQKSNIYRMALD 519



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSG 401
           Q+K      P  SP G   A+  + G+   I  +  +G    R+   D     P  SP G
Sbjct: 20  QEKSYFLSSPSLSPDGKT-AYFSYDGD---IWRVDSNGGNASRITALDGEEINPRVSPDG 75

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + L FS  + G     LY +   G     + 
Sbjct: 76  KWLAFSSNQYG--NYDLYVMPSEGGTIKQLT 104


>gi|298481788|ref|ZP_06999978.1| MdsD protein [Bacteroides sp. D22]
 gi|298272010|gb|EFI13581.1| MdsD protein [Bacteroides sp. D22]
          Length = 1096

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 81/236 (34%), Gaps = 34/236 (14%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            + + R SP+  ++ +      DI +V            ++    S    P +SS+GK+ 
Sbjct: 24  WMRDARISPDGSEIVFCY--KGDIYKVPAQ----GGTAVQLTTQTSYEANPVWSSDGKQI 77

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
             +  ++   DI+ +     A  RLT      I ++++PD   + F +            
Sbjct: 78  AFASDRNGNFDIFIMPADGGAARRLTYHSASEIPSTFTPDGKYVFFSASIQDPASSALFP 137

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGE 369
                +LY +   G   +++     A       +  G    +               S  
Sbjct: 138 TGAMTELYKVPVAGGRTEQVL-GTPAELVCFDKT--GKNFLYQDRKGFEDEWRKHHTSSI 194

Query: 370 KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              I +      +   L       + P ++P G ++ F  ++DG +   +Y+  L+
Sbjct: 195 TRDIWLYNTQTGKHTNLTNRGGEDRNPVYAPDGNAVYFLSERDGGS-FNVYTFPLS 249



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 78/221 (35%), Gaps = 34/221 (15%)

Query: 252 RIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +    S  + P +      S +G   +   + D    IY V  Q     +LT       
Sbjct: 11  VLSALSSYAITPLWMRDARISPDGSEIVFCYKGD----IYKVPAQGGTAVQLTTQTSYEA 66

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  +S D  QI F SDR G   +++M ++G   +R++    AS     ++P G  + F+ 
Sbjct: 67  NPVWSSDGKQIAFASDRNGNFDIFIMPADGGAARRLTY-HSASEIPSTFTPDGKYVFFSA 125

Query: 366 F-----------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--- 411
                       +G    +  +   G +   ++     +   +  +G++ ++  +K    
Sbjct: 126 SIQDPASSALFPTGAMTELYKVPVAGGRTEQVLGTP-AELVCFDKTGKNFLYQDRKGFED 184

Query: 412 -------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                        ++  +   G++  L N      +P +  
Sbjct: 185 EWRKHHTSSITRDIWLYNTQTGKHTNLTNRGGEDRNPVYAP 225



 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 98/310 (31%), Gaps = 81/310 (26%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM------- 259
             +R      P ++P+   V + +  D     VY       +  K +  F++        
Sbjct: 211 LTNRGGEDRNPVYAPDGNAVYFLSERDGGSFNVYTFPLSTPQEVKAVTTFKTHPVRFLSV 270

Query: 260 ----------------------------------------------ILAPRFSSNGKRAL 273
                                                           +   S +GK+  
Sbjct: 271 SDKGTLCYTYDGELYTQKSGARPEKVKVELVRDDGQQLATLKFSQGATSASVSPDGKQIA 330

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM-- 331
             V+ D    ++        T+++TNT     + S++PD+  +V+ S+R G  QLY    
Sbjct: 331 FIVRGD----VFVTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASERTGNWQLYTAKI 386

Query: 332 ---------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                     +   +++ +   K      P +SP G  +AF +       + V+     +
Sbjct: 387 SRKEDPNFPNATLIEEEVLLPSKTVERAYPQYSPDGKELAFIEDRN---RLMVLNLKTKK 443

Query: 383 ERLLVEDSNLQ------APTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            R + + S            WSP G+   L F   +  D  S +  +   G   T +   
Sbjct: 444 VRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRH-DPYSDVGIVSAQGGATTNLTNS 502

Query: 435 AYAS-DPQWV 443
            Y S  P+WV
Sbjct: 503 GYISGAPRWV 512



 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 87/255 (34%), Gaps = 32/255 (12%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           L+  +S           V D DG   +  T    Q       SP+ +++A+    D    
Sbjct: 284 LYTQKSGARPEKVKVELVRD-DGQ--QLATLKFSQGATSASVSPDGKQIAFIVRGD---- 336

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
               + +      K+I N  +   A  F+ + +  + + ++     +Y+  +        
Sbjct: 337 --VFVTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASERTGNWQLYTAKISRKEDPNF 394

Query: 298 TNTLFINIS------------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD- 344
            N   I                 YSPD  ++ F  DR    +L V+       ++++   
Sbjct: 395 PNATLIEEEVLLPSKTVERAYPQYSPDGKELAFIEDR---NRLMVLNLKTKKVRQVTDGS 451

Query: 345 ---KEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQ-APTW 397
                   FD  WSP G    + F     + +  +G++   G     L     +  AP W
Sbjct: 452 TWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDVGIVSAQGGATTNLTNSGYISGAPRW 511

Query: 398 SPSGRSLIFSRKKDG 412
              G +++F  ++ G
Sbjct: 512 VLDGNAILFQTERYG 526



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 104/324 (32%), Gaps = 86/324 (26%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT         P +S + +++A+A+  + +   +++M      
Sbjct: 41  YKGDIYKVPAQGGTAVQLTTQTS-YEANPVWSSDGKQIAFASDRNGN-FDIFIMPAD-GG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATER- 296
           A +R+    +  +   F+ +GK    S                  ++Y V +    TE+ 
Sbjct: 98  AARRLTYHSASEIPSTFTPDGKYVFFSASIQDPASSALFPTGAMTELYKVPVAGGRTEQV 157

Query: 297 ------------------------------------LTNT-----------------LFI 303
                                               +T                      
Sbjct: 158 LGTPAELVCFDKTGKNFLYQDRKGFEDEWRKHHTSSITRDIWLYNTQTGKHTNLTNRGGE 217

Query: 304 NISASYSPDSSQIVFESDREGKE-QLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDL- 360
           + +  Y+PD + + F S+R+G    +Y    +   + K ++  K         S +G L 
Sbjct: 218 DRNPVYAPDGNAVYFLSERDGGSFNVYTFPLSTPQEVKAVTTFKTHPVRFLSVSDKGTLC 277

Query: 361 -----IAFTKFSG---EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
                  +T+ SG   EK  + +++ DG Q   L       + + SP G+ + F  +   
Sbjct: 278 YTYDGELYTQKSGARPEKVKVELVRDDGQQLATLKFSQGATSASVSPDGKQIAFIVR--- 334

Query: 413 DTGSKLYSIDLN-GRNETLINTPA 435
                ++    +    + + NTPA
Sbjct: 335 ---GDVFVTSTDYATTKQITNTPA 355



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 86/220 (39%), Gaps = 22/220 (10%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK     V   ++ V        K+  ++PA    ++    +      +   G+
Sbjct: 320 ASVSPDGKQIAFIVRGDVF-VTSTDYATTKQITNTPAKEAAVSFAPDNRTLVYASERTGN 378

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +      +S          +L            L PS+      P++SP+ +++A+    
Sbjct: 379 WQLYTAKISRKEDPNFPNATLI-------EEEVLLPSKTVERAYPQYSPDGKELAFI--- 428

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRA---LISVQKDEAMDI 284
            ED  R+ +++ +  +  +++ +              +S +GK      I  + D   D+
Sbjct: 429 -EDRNRLMVLNLKT-KKVRQVTDGSTWYNTGGGFDYEWSPDGKWFTLEFIGNRHDPYSDV 486

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
             V  Q  AT  LTN+ +I+ +  +  D + I+F+++R G
Sbjct: 487 GIVSAQGGATTNLTNSGYISGAPRWVLDGNAILFQTERYG 526


>gi|209523154|ref|ZP_03271710.1| WD-40 repeat protein [Arthrospira maxima CS-328]
 gi|209496305|gb|EDZ96604.1| WD-40 repeat protein [Arthrospira maxima CS-328]
          Length = 829

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 106/325 (32%), Gaps = 41/325 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G     V  RLWDV   +++  ++      S                      +
Sbjct: 390 GQTLASGSGDNTV--RLWDVATGREL--RQLTGHTES---------------------VW 424

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + R+    +++ SG    ++ + D                ++   FSP+ Q +A  + D+
Sbjct: 425 SVRLSPDGQTLASGSWDKTVRLWDVATGRELRQLTGHTSTVWSVSFSPDGQTLASGSSDN 484

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                V L D    R  +++      + +  FS +G+    S   D  + ++ V      
Sbjct: 485 ----TVRLWDVATGRELRQLTGHTDWVWSVSFSPDGQTLA-SGSGDNTVRLWDV-ATGRE 538

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             +LT       S S+SPD   +   S       + +       + R             
Sbjct: 539 LRQLTGHTSWVESVSFSPDGQTLASGSH---DNTVRLWDVATGRELRQLTGHTDWVLSVR 595

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
           +SP G  +A   +        V    G   R L   ++   +  +SP G++L        
Sbjct: 596 FSPDGQTLASGSYDNTVRLWDV--ATGRPLRQLTGHTDWVLSVRFSPDGQTLASGSD--- 650

Query: 413 DTGSKLYSIDLNGRNETLINTPAYA 437
           D   +L+ +   GR    +     +
Sbjct: 651 DNTVRLWDVP-TGRELRQLTGHTNS 674



 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 104/308 (33%), Gaps = 39/308 (12%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  LWD+   + +  ++        R +  + S D                    +++ S
Sbjct: 317 DIYLWDLSTGQLL--RQLTGHTRDVRSV--SFSPD-------------------GQTLAS 353

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G   N++ + D                ++   FSP+ Q +A  + D+     V L D   
Sbjct: 354 GSGDNTVRLWDVATGRELRQLTGHTDWVWSVSFSPDGQTLASGSGDN----TVRLWDVAT 409

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R  +++      + + R S +G+    S   D+ + ++ V        +LT       S
Sbjct: 410 GRELRQLTGHTESVWSVRLSPDGQTLA-SGSWDKTVRLWDV-ATGRELRQLTGHTSTVWS 467

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SPD   +   S       + +       + R         +   +SP G  +A    
Sbjct: 468 VSFSPDGQTLASGSS---DNTVRLWDVATGRELRQLTGHTDWVWSVSFSPDGQTLASGSG 524

Query: 367 SGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                   V    G + R L    S +++ ++SP G++L        D   +L+ +   G
Sbjct: 525 DNTVRLWDV--ATGRELRQLTGHTSWVESVSFSPDGQTLASGSH---DNTVRLWDV-ATG 578

Query: 426 RNETLINT 433
           R    +  
Sbjct: 579 RELRQLTG 586



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 84/247 (34%), Gaps = 16/247 (6%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + + D     +        + +    FSP+ Q +A  + D+     V L D    
Sbjct: 313 RSNKDIYLWDLSTGQLLRQLTGHTRDVRSVSFSPDGQTLASGSGDN----TVRLWDVATG 368

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R  +++      + +  FS +G+    S   D  + ++ V        +LT       S 
Sbjct: 369 RELRQLTGHTDWVWSVSFSPDGQTLA-SGSGDNTVRLWDV-ATGRELRQLTGHTESVWSV 426

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             SPD   +   S     + + +       + R      ++ +   +SP G  +A     
Sbjct: 427 RLSPDGQTLASGS---WDKTVRLWDVATGRELRQLTGHTSTVWSVSFSPDGQTLASGSSD 483

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                  V    G + R L   ++   + ++SP G++L       GD   +L+ +   GR
Sbjct: 484 NTVRLWDV--ATGRELRQLTGHTDWVWSVSFSPDGQTLA---SGSGDNTVRLWDV-ATGR 537

Query: 427 NETLINT 433
               +  
Sbjct: 538 ELRQLTG 544



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 55/306 (17%), Positives = 102/306 (33%), Gaps = 38/306 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDV   +++            +   HT  D +        G     
Sbjct: 559 QTLASGSHDNTVRLWDVATGREL-----------RQLTGHT--DWVLSVRFSPDG----- 600

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                +++ SG   N++ + D                +   RFSP+ Q +A  + D+   
Sbjct: 601 -----QTLASGSYDNTVRLWDVATGRPLRQLTGHTDWVLSVRFSPDGQTLASGSDDN--- 652

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             V L D    R  +++    + + + RFS +G+    S   D  + ++ V        +
Sbjct: 653 -TVRLWDVPTGRELRQLTGHTNSVNSVRFSPDGQTLA-SGSWDNTVRLWDV-ATGRELRQ 709

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT       S S+SPD   +   S       + +       + R      +S     +S 
Sbjct: 710 LTGDTNWVRSVSFSPDGQTLASGSY---DNIVRLWDVATGRELRQLTGHTSSVNSVSFSS 766

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            G  +A   +        V    G + R L    S + + ++SP G++L        D  
Sbjct: 767 DGQTLASGSWDNTVRLWDV--ATGRELRQLTGHTSTVYSVSFSPDGQTLASGSD---DGV 821

Query: 416 SKLYSI 421
            +L+ +
Sbjct: 822 VRLWRV 827



 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 74/217 (34%), Gaps = 17/217 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S + Q +A           +YL D    +  +++      + +  FS +G+    S  
Sbjct: 302 AVSADGQLLA-----LRSNKDIYLWDLSTGQLLRQLTGHTRDVRSVSFSPDGQTLA-SGS 355

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++ V        +LT       S S+SPD   +   S   G   + +       
Sbjct: 356 GDNTVRLWDV-ATGRELRQLTGHTDWVWSVSFSPDGQTLASGS---GDNTVRLWDVATGR 411

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPT 396
           + R       S +    SP G  +A   +        V    G + R L    S + + +
Sbjct: 412 ELRQLTGHTESVWSVRLSPDGQTLASGSWDKTVRLWDV--ATGRELRQLTGHTSTVWSVS 469

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +SP G++L        D   +L+ +   GR    +  
Sbjct: 470 FSPDGQTLA---SGSSDNTVRLWDV-ATGRELRQLTG 502



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/218 (21%), Positives = 82/218 (37%), Gaps = 32/218 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G D   V  RLWDV   +++  ++      S   +    S D            
Sbjct: 642 GQTLASGSDDNTV--RLWDVPTGREL--RQLTGHTNSVNSV--RFSPD------------ 683

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                   +++ SG   N++ + D                +    FSP+ Q +A  +YD+
Sbjct: 684 -------GQTLASGSWDNTVRLWDVATGRELRQLTGDTNWVRSVSFSPDGQTLASGSYDN 736

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                V L D    R  +++    S + +  FSS+G+    S   D  + ++ V      
Sbjct: 737 ----IVRLWDVATGRELRQLTGHTSSVNSVSFSSDGQTLA-SGSWDNTVRLWDV-ATGRE 790

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +LT       S S+SPD   +   SD +G  +L+ +
Sbjct: 791 LRQLTGHTSTVYSVSFSPDGQTLASGSD-DGVVRLWRV 827


>gi|148262153|ref|YP_001228859.1| APHP domain-containing protein [Geobacter uraniireducens Rf4]
 gi|146395653|gb|ABQ24286.1| APHP domain protein [Geobacter uraniireducens Rf4]
          Length = 1951

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 89/228 (39%), Gaps = 10/228 (4%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P ++    K+A   YD     R+ + D    +              P +S++G + + +
Sbjct: 123 NPVWNAAGDKIAMQFYDSRGNDRIAVFDVHTVKMTPLTAGLYVYEQTPAWSADGTKVIFT 182

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             K+   +I+S DL S A  ++T+ +F   +   S D S+I F    +G   L V+    
Sbjct: 183 SNKNGYQEIWSKDLISGAETQVTHGVFA-YNPKPSQDGSRIAFF---DGST-LKVIDLQT 237

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-A 394
           +    +     A+     WS  G  I+F    G  ++I        Q   +    +    
Sbjct: 238 AVTTLV---GTANQNTHNWSADGKRISFRANKGTGYSIFSYDLMTGQTSEVAASVHYSII 294

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           P+WSP G  ++F++ + G  G  L +  L G +  +       +   W
Sbjct: 295 PSWSPDGSEILFAKAEPG-GGYALLASTLTGESRLVKKVTGNITYANW 341



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 105/285 (36%), Gaps = 16/285 (5%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y S+TG        +  V+     G        + ++G  +         ++    FS +
Sbjct: 28  YPSVTGIPAVVYDGLADVAGFTEPGAN----VFIFKEGEKVGEAVALASHLVESKSFSFS 83

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEA 281
              +A++         ++      + +             P +++ G +  +        
Sbjct: 84  GSDIAFSLDGTSAAYTLFNNVYEKNLSTGVETLLAESARNPVWNAAGDKIAMQFYDSRGN 143

Query: 282 MDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             I   D+ +     LT  L+    + ++S D ++++F S++ G ++++        + +
Sbjct: 144 DRIAVFDVHTVKMTPLTAGLYVYEQTPAWSADGTKVIFTSNKNGYQEIWSKDLISGAETQ 203

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           ++    A  ++P  S  G  IAF  F G    + V+    +    LV  +N     WS  
Sbjct: 204 VTHGVFA--YNPKPSQDGSRIAF--FDGST--LKVIDLQTA-VTTLVGTANQNTHNWSAD 256

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
           G+ + F   K   TG  ++S DL  G+   +  +  Y+  P W  
Sbjct: 257 GKRISFRANKG--TGYSIFSYDLMTGQTSEVAASVHYSIIPSWSP 299



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 74/222 (33%), Gaps = 14/222 (6%)

Query: 151 WRKIAHTISDDIYQSITGEKGD-FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           W      I+   Y S   ++   F+   + ++       +         DG  + + +  
Sbjct: 126 WNAAGDKIAMQFYDSRGNDRIAVFDVHTVKMTPLTAGLYVYEQTPAWSADGTKVIFTSNK 185

Query: 210 RDQILFEPR--FSPNQQKV-----AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                   +   S  + +V     AY     +D  R+   D    +         +++  
Sbjct: 186 NGYQEIWSKDLISGAETQVTHGVFAYNPKPSQDGSRIAFFDGSTLKVIDLQTAVTTLVGT 245

Query: 263 PR-----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                  +S++GKR      K     I+S DL +  T  +  ++  +I  S+SPD S+I+
Sbjct: 246 ANQNTHNWSADGKRISFRANKGTGYSIFSYDLMTGQTSEVAASVHYSIIPSWSPDGSEIL 305

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           F     G     +  +   +  R+ +    +     W   G 
Sbjct: 306 FAKAEPGGGYALLASTLTGES-RLVKKVTGNITYANWEKDGR 346


>gi|163849346|ref|YP_001637390.1| WD40 domain-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222527342|ref|YP_002571813.1| WD40 domain-containing protein [Chloroflexus sp. Y-400-fl]
 gi|163670635|gb|ABY37001.1| WD40 domain protein beta Propeller [Chloroflexus aurantiacus
           J-10-fl]
 gi|222451221|gb|ACM55487.1| WD40 domain protein beta Propeller [Chloroflexus sp. Y-400-fl]
          Length = 620

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 105/325 (32%), Gaps = 45/325 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--FS 220
           Y  +       +     +  S +       L     DG   R    + + + F  R  + 
Sbjct: 294 YPHLGAPWVAPDPATPLIYASNIDTGSHWELYRATFDGGGRRLTFNNGETVAFSWRRSWD 353

Query: 221 PNQQKVAYATYDDEDILR-VYLMDTRIDRAPKR------------------------IGN 255
           PNQ  +   +  +    R +YL++     A ++                          +
Sbjct: 354 PNQHFLVVDSRRNSPQYRQIYLLNAVAADAGEQAAGASVVRISYSNADGNFPPSDNDSSS 413

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE----RLT--NTLFINISASY 309
                     S +G       ++     +Y   L  +        +T  +      S ++
Sbjct: 414 IPGSEYNASVSPDGTLLAFVSERQGIPQLYLRRLNVSPLRGYASPITAYDRPCNVESPTW 473

Query: 310 SPDSSQIVFESDREGKEQLY-----------VMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           SPD   + + ++ EG  ++Y           +  S   +  R   +  A+      SP G
Sbjct: 474 SPDGRYLFWVTNCEGNFEIYRATIVFYYIDDLFASISLNNIRNLSNNAANDRFARISPDG 533

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             IAF       + I VM  DGS  R L  + +   +PTWS + + L F+  +DGD    
Sbjct: 534 RTIAFASDRDGNWEIYVMNSDGSNVRRLTNNAATDDSPTWSLTNQQLAFASDRDGDFEIY 593

Query: 418 LYSIDLNGRNETLINTPAYASDPQW 442
           + ++      + +    A    P W
Sbjct: 594 ILNVSDGAIVQQVTQNTAQDRWPLW 618



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 80/203 (39%), Gaps = 12/203 (5%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +       D            +  +    L V    G         R   +  P +SP+ 
Sbjct: 418 EYNASVSPDGTLLAFVSERQGIPQLYLRRLNVSPLRGYASPITAYDRPCNVESPTWSPDG 477

Query: 224 QKVAYATYDDED-------ILRVYLMDTRID---RAPKRIGNFRSMILAPRFSSNGKRAL 273
           + + + T  + +       I+  Y+ D          + + N  +     R S +G+   
Sbjct: 478 RYLFWVTNCEGNFEIYRATIVFYYIDDLFASISLNNIRNLSNNAANDRFARISPDGRTIA 537

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +  +D   +IY ++   +   RLTN    + S ++S  + Q+ F SDR+G  ++Y++  
Sbjct: 538 FASDRDGNWEIYVMNSDGSNVRRLTNNAATDDSPTWSLTNQQLAFASDRDGDFEIYILNV 597

Query: 334 -NGSDQKRISQDKEASYFDPVWS 355
            +G+  ++++Q+  A    P+W+
Sbjct: 598 SDGAIVQQVTQNT-AQDRWPLWA 619



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 102/294 (34%), Gaps = 52/294 (17%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   ++    R   L  P  +P+         + +      L     D   +R+      
Sbjct: 283 GNVGQHYFQWRYPHLGAPWVAPDPATPLIYASNIDTGSHWELYRATFDGGGRRLTFNNGE 342

Query: 260 ILAPRFS----SNGKRALISVQKD--EAMDIYSVD---------LQSNATERLTNT---- 300
            +A  +      N    ++  +++  +   IY ++             +  R++ +    
Sbjct: 343 TVAFSWRRSWDPNQHFLVVDSRRNSPQYRQIYLLNAVAADAGEQAAGASVVRISYSNADG 402

Query: 301 ------------LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-----ISQ 343
                            +AS SPD + + F S+R+G  QLY+ + N S  +       + 
Sbjct: 403 NFPPSDNDSSSIPGSEYNASVSPDGTLLAFVSERQGIPQLYLRRLNVSPLRGYASPITAY 462

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV------------MKKDGSQERLLVED-S 390
           D+  +   P WSP G  + +       F I                   +  R L  + +
Sbjct: 463 DRPCNVESPTWSPDGRYLFWVTNCEGNFEIYRATIVFYYIDDLFASISLNNIRNLSNNAA 522

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD-PQWV 443
           N +    SP GR++ F+  +DG+   ++Y ++ +G N   +   A   D P W 
Sbjct: 523 NDRFARISPDGRTIAFASDRDGNW--EIYVMNSDGSNVRRLTNNAATDDSPTWS 574


>gi|317128020|ref|YP_004094302.1| WD40-like beta Propeller containing protein [Bacillus
           cellulosilyticus DSM 2522]
 gi|315472968|gb|ADU29571.1| WD40-like beta Propeller containing protein [Bacillus
           cellulosilyticus DSM 2522]
          Length = 666

 Score =  112 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 96/246 (39%), Gaps = 62/246 (25%)

Query: 260 ILAPRFSSNGKRALISV-----QKDEAM-DIYSVDLQSNATERLTNTLF------INISA 307
           +  P+ S N  +A   +     +KD    +IY  DL+     + T+         ++ + 
Sbjct: 17  VGDPQVSPNKDKAAYVLTHVDKEKDGYYSNIYVTDLKGPG-RQFTSHYAKEDKLVVDAAP 75

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
            +SPD S + F S+R GK Q+Y++ ++G +  +++  K+    D  WSP G  +  T   
Sbjct: 76  KWSPDGSSLAFRSNRTGKNQVYLLHTDGGEAIQLTDVKQG-VGDYDWSPDGSKLVLTIRG 134

Query: 367 -----------------------------------SGEKFAIGVMKKDGSQERLLVE-DS 390
                                              + ++  + +   +  +   + E D 
Sbjct: 135 EFKLSTDKDEEKKEEKSDVKVITRLRYKGDGAGIYNDDRTHVYLFDVNTKEYTKVTEGDH 194

Query: 391 NLQAPTWSPSGRSLIF----SRKKDGDTGSKLYSIDLNGRNETL-------INTPAYASD 439
           +   P +SP G SLI+    +  K+      ++  D+  + E L       I  P+++ D
Sbjct: 195 DFGQPRFSPDGASLIYIGTKAEDKEWGYLPAIWKYDIEKKEEALFYQGNGYIYAPSFSPD 254

Query: 440 PQWVGF 445
            +W+ F
Sbjct: 255 GKWLAF 260



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 102/308 (33%), Gaps = 72/308 (23%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQ----ILFEPRFSPNQQKVAYATYDDEDILRVYL 241
                +++ V D  G   ++ +    +    +   P++SP+   +A+ +       +VYL
Sbjct: 40  KDGYYSNIYVTDLKGPGRQFTSHYAKEDKLVVDAAPKWSPDGSSLAFRSNRTGKN-QVYL 98

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------------------------ 277
           + T    A + + + +  +    +S +G + +++++                        
Sbjct: 99  LHTDGGEAIQ-LTDVKQGVGDYDWSPDGSKLVLTIRGEFKLSTDKDEEKKEEKSDVKVIT 157

Query: 278 ------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----- 320
                        D+   +Y  D+ +    ++T          +SPD + +++       
Sbjct: 158 RLRYKGDGAGIYNDDRTHVYLFDVNTKEYTKVTEGDHDFGQPRFSPDGASLIYIGTKAED 217

Query: 321 -DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----KFSGEKFAIG 374
            +      ++       ++  +        + P +SP G  +AF      + S     + 
Sbjct: 218 KEWGYLPAIWKYDIEKKEEA-LFYQGNGYIYAPSFSPDGKWLAFAGHNRGERSQGNANVL 276

Query: 375 VMKKDGSQERLLVEDSNLQAP----------------TWSPSGRSLIFSRKKDGDTGSKL 418
           ++  +  + + L E+ +                    TW  +   + F     GD   +L
Sbjct: 277 LLSYETGELKNLTENFDYTVGNLVGVDAKYDTGGGNLTWDATSSHIYFIATVGGD--CQL 334

Query: 419 YSIDLNGR 426
           + ++L G 
Sbjct: 335 FRVNLKGE 342



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 58/208 (27%), Gaps = 24/208 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR----IGNFRSMI 260
                 D    +PRFSP+   + Y     ED    YL         K+           I
Sbjct: 187 TKVTEGDHDFGQPRFSPDGASLIYIGTKAEDKEWGYLPAIWKYDIEKKEEALFYQGNGYI 246

Query: 261 LAPRFSSNGKRALISV-----QKDEAMDIYSVDLQSNATERLTNTLFI------------ 303
            AP FS +GK    +      +     ++  +  ++   + LT                 
Sbjct: 247 YAPSFSPDGKWLAFAGHNRGERSQGNANVLLLSYETGELKNLTENFDYTVGNLVGVDAKY 306

Query: 304 NISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +      ++   SS I F +   G  QL+ +   G     +S    +     + +    +
Sbjct: 307 DTGGGNLTWDATSSHIYFIATVGGDCQLFRVNLKGEVSDSLSPSVASVTSYDIVNDDKAV 366

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +           +     D      L  
Sbjct: 367 LVLATPHSTGDVVTQDLTDVKSVVKLTN 394


>gi|323343852|ref|ZP_08084079.1| tricorn family protease MdsD [Prevotella oralis ATCC 33269]
 gi|323095671|gb|EFZ38245.1| tricorn family protease MdsD [Prevotella oralis ATCC 33269]
          Length = 1102

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 75/201 (37%), Gaps = 28/201 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     S + D    I+++ +Q     +LT+         +SPD  +I F S RE
Sbjct: 63  SISPDGTTIAFSYKGD----IFTIPVQGGNARQLTSNAAYESYPIWSPDGERIAFVSTRE 118

Query: 324 GKEQLYVMQSNGSDQKRIS-----------QDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           G   +YVM  +G + KR++           +D E   F+    P    I F      +  
Sbjct: 119 GSYDIYVMSKDGGEPKRLTTDSGNEIPMTWRDNEHILFETTGMPTAKSIYFASSQFPQ-- 176

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLYSIDL 423
           +      GS+ R LV    +++ + + +G  L          F +         ++ ++ 
Sbjct: 177 VYETDVKGSRPR-LVSAVTMESMSINKNGDILYHDKKGYEDEFRKHHRSPITRDIW-LNK 234

Query: 424 NGRNETLINTPAYASDPQWVG 444
           NG+   L        +P W  
Sbjct: 235 NGKFTKLTAFNGEDRNPVWAA 255



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 61/304 (20%), Positives = 110/304 (36%), Gaps = 40/304 (13%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
             +  ++ E G FN     V    V    K  L     +   +RYLT + +  L    F 
Sbjct: 258 QSFYYLSEEDGTFN-----VYRRNVESADKTQLTRFKDN--PVRYLTAAENGTLC---FC 307

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKD 279
            + +   Y   +  +  +V +  T        I   ++      + S +GK     +  D
Sbjct: 308 YDGE--IYTLREGGEPTKVNINITADKNDADLIRQIKTNGATEIKVSPSGKEIAFVLHGD 365

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               +Y   +    T+++T+T     S  ++PD   I + S+R G  Q+Y        +K
Sbjct: 366 ----VYVTSIDYRTTKQITDTPEQERSIDFAPDGRSIAYASERNGLWQIYQTTIKNKGEK 421

Query: 340 RISQDK----------EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           + +             +++ F P++SP G  IAF +       +  +       R L++ 
Sbjct: 422 QFTYATDLEETQLVKSDSTSFQPLYSPDGKSIAFLENRNT---LRAVDLKSKTVRTLMDG 478

Query: 390 SNLQAPT-------WSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASD 439
               + +       WSP  R L+ S    G   +K   L S   NG    L  +     +
Sbjct: 479 KYNYSYSDGDVWCTWSPDSRWLLASYIGYGGWNNKDIALVSASGNGEIYNLTESGYNDGN 538

Query: 440 PQWV 443
            +WV
Sbjct: 539 GKWV 542



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 87/246 (35%), Gaps = 37/246 (15%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +     SP+   +A++     DI  + +         +++ +  +    P +S +G
Sbjct: 55  HPLWMRYSSISPDGTTIAFSY--KGDIFTIPVQ----GGNARQLTSNAAYESYPIWSPDG 108

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY------------SPDSSQIV 317
           +R      ++ + DIY +       +RLT      I  ++             P +  I 
Sbjct: 109 ERIAFVSTREGSYDIYVMSKDGGEPKRLTTDSGNEIPMTWRDNEHILFETTGMPTAKSIY 168

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-----------TKF 366
           F S +    Q+Y     GS  + +S     S      +  GD++                
Sbjct: 169 FASSQ--FPQVYETDVKGSRPRLVSAVTMESM---SINKNGDILYHDKKGYEDEFRKHHR 223

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           S     I +  K+G   +L   +   + P W+  G+S  +  ++DG     +Y  ++   
Sbjct: 224 SPITRDIWL-NKNGKFTKLTAFNGEDRNPVWAADGQSFYYLSEEDGTF--NVYRRNVESA 280

Query: 427 NETLIN 432
           ++T + 
Sbjct: 281 DKTQLT 286



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/376 (10%), Positives = 102/376 (27%), Gaps = 128/376 (34%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    + ++   K  +  +   G N R LT S       P +SP+ +++A+ +  +    
Sbjct: 64  ISPDGTTIAFSYKGDIFTIPVQGGNARQLT-SNAAYESYPIWSPDGERIAFVSTREGS-Y 121

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFS------------SNGKRALISVQKDEAMDIY 285
            +Y+M ++    PKR+       +   +                K    +  +     +Y
Sbjct: 122 DIYVM-SKDGGEPKRLTTDSGNEIPMTWRDNEHILFETTGMPTAKSIYFASSQ--FPQVY 178

Query: 286 SVDLQS---------------------------------------------------NAT 294
             D++                                                       
Sbjct: 179 ETDVKGSRPRLVSAVTMESMSINKNGDILYHDKKGYEDEFRKHHRSPITRDIWLNKNGKF 238

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ----------- 343
            +LT     + +  ++ D     + S+ +G   +Y      +D+ ++++           
Sbjct: 239 TKLTAFNGEDRNPVWAADGQSFYYLSEEDGTFNVYRRNVESADKTQLTRFKDNPVRYLTA 298

Query: 344 -------------------DKEASYFDPVWSPQ-----------------------GDLI 361
                                E +  +   +                         G  I
Sbjct: 299 AENGTLCFCYDGEIYTLREGGEPTKVNINITADKNDADLIRQIKTNGATEIKVSPSGKEI 358

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYS 420
           AF         + V   D    + + +    + +  ++P GRS+ ++ +++G    ++Y 
Sbjct: 359 AFVLHGD----VYVTSIDYRTTKQITDTPEQERSIDFAPDGRSIAYASERNGLW--QIYQ 412

Query: 421 IDLNGRNETLINTPAY 436
             +  + E        
Sbjct: 413 TTIKNKGEKQFTYATD 428



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 101/306 (33%), Gaps = 34/306 (11%)

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
           K+   +P   R I            +   G +    ++ +     G  + +      D  
Sbjct: 377 KQITDTPEQERSIDFAPDGRSIAYASERNGLWQ---IYQTTIKNKGEKQFTYAT---DLE 430

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMI 260
             + +    D   F+P +SP+ + +A+    +    + +     R     K   ++    
Sbjct: 431 ETQLVK--SDSTSFQPLYSPDGKSIAFLENRNTLRAVDLKSKTVRTLMDGKYNYSYSDGD 488

Query: 261 LAPRFSSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQI 316
           +   +S + +  L S          DI  V          LT + + + +  +      +
Sbjct: 489 VWCTWSPDSRWLLASYIGYGGWNNKDIALVSASGNGEIYNLTESGYNDGNGKWVLGGKAM 548

Query: 317 VFESDREGK---------EQLYVM--QSNGSDQKRISQDKEASYFDPVWSPQGDLI---- 361
           +FESDR G            +Y+M    +  ++ ++S++++  Y +              
Sbjct: 549 IFESDRAGYRSHGSWGSESDMYIMFFDLDAYERFKMSKEEKTLYDEAKKEEAAAKEQKTV 608

Query: 362 -AFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
               K   +K  I     D       RL V  S L     SP G +L +    +G  G  
Sbjct: 609 DVTVKKKPKKEEILKFDLDNCRDRVLRLTVNSSRLGDALLSPGGDTLYYQAAFEG--GYD 666

Query: 418 LYSIDL 423
           L+  DL
Sbjct: 667 LWKHDL 672


>gi|116201935|ref|XP_001226779.1| hypothetical protein CHGG_08852 [Chaetomium globosum CBS 148.51]
 gi|88177370|gb|EAQ84838.1| hypothetical protein CHGG_08852 [Chaetomium globosum CBS 148.51]
          Length = 1011

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 88/252 (34%), Gaps = 19/252 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +V SG    ++ + D      +         ++   FSP+ + VA  + D      + L
Sbjct: 442 RTVASGSADETIRLWDAATGAHQQTLKGHSSAVYAVAFSPDGRTVATGSDDS----TIRL 497

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +    S + A  FS +G+    +   D+ + ++  D  + A ++ L   
Sbjct: 498 WDAATGAHQQTLEGHSSGVSAVAFSPDGRTVA-TGSDDDTIRLW--DAATGAHQQTLKGH 554

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                + ++SPD   +   S   G   + +  +     ++  +    + +   +SP G  
Sbjct: 555 SNWVFAVAFSPDGRTVASGS---GDSTIRLWDAATGAHQQTLKGHSGAVYAVAFSPDGRT 611

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A          I +        +  +      + A  +SP GR++      D     +L
Sbjct: 612 VA---TGSGDSTIRLWDAATGAHQQTLKGHSGAVYAVAFSPDGRTVATGSYDD---TIRL 665

Query: 419 YSIDLNGRNETL 430
           +        +TL
Sbjct: 666 WDAATGAHQQTL 677



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 85/238 (35%), Gaps = 20/238 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +         +    FSP+ + VA  + D+     + L D       + +    S + A
Sbjct: 421 HQQTLEGHSSSVRAVAFSPDGRTVASGSADE----TIRLWDAATGAHQQTLKGHSSAVYA 476

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESD 321
             FS +G+    +   D  + ++  D  + A ++        +SA ++SPD   +   SD
Sbjct: 477 VAFSPDGRTVA-TGSDDSTIRLW--DAATGAHQQTLEGHSSGVSAVAFSPDGRTVATGSD 533

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               + + +  +     ++  +      F   +SP G  +A          I +      
Sbjct: 534 ---DDTIRLWDAATGAHQQTLKGHSNWVFAVAFSPDGRTVA---SGSGDSTIRLWDAATG 587

Query: 382 QERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             +  +      + A  +SP GR++       GD+  +L+     G ++  +   + A
Sbjct: 588 AHQQTLKGHSGAVYAVAFSPDGRTVA---TGSGDSTIRLWDA-ATGAHQQTLKGHSGA 641



 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 87/285 (30%), Gaps = 39/285 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWD                       H  S  +Y       G     
Sbjct: 442 RTVASGSADETIRLWDAATG-----------AHQQTLKGH--SSAVYAVAFSPDG----- 483

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 +V +G   +++ + D      +         +    FSP+ + VA  + DD   
Sbjct: 484 -----RTVATGSDDSTIRLWDAATGAHQQTLEGHSSGVSAVAFSPDGRTVATGSDDD--- 535

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L D       + +    + + A  FS +G+    S   D  + ++  D  + A ++
Sbjct: 536 -TIRLWDAATGAHQQTLKGHSNWVFAVAFSPDGRTVA-SGSGDSTIRLW--DAATGAHQQ 591

Query: 297 -LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L        + ++SPD   +   S   G   + +  +     ++  +    + +   +S
Sbjct: 592 TLKGHSGAVYAVAFSPDGRTVATGS---GDSTIRLWDAATGAHQQTLKGHSGAVYAVAFS 648

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWS 398
           P G  +A   +      I +        +  +    S + A  +S
Sbjct: 649 PDGRTVATGSYDDT---IRLWDAATGAHQQTLKGHSSAVYAVAFS 690



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 75/209 (35%), Gaps = 16/209 (7%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           + +  +  + +        + +    S + A  FS +G+    S   DE + ++  D  +
Sbjct: 404 EAKKFVLGHGIRAGWGAHQQTLEGHSSSVRAVAFSPDGRTVA-SGSADETIRLW--DAAT 460

Query: 292 NATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            A ++ L        + ++SPD   +   SD      + +  +     ++  +   +   
Sbjct: 461 GAHQQTLKGHSSAVYAVAFSPDGRTVATGSD---DSTIRLWDAATGAHQQTLEGHSSGVS 517

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSR 408
              +SP G  +A          I +        +  ++  +    A  +SP GR++    
Sbjct: 518 AVAFSPDGRTVATGSDDDT---IRLWDAATGAHQQTLKGHSNWVFAVAFSPDGRTVA--- 571

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              GD+  +L+     G ++  +   + A
Sbjct: 572 SGSGDSTIRLWDA-ATGAHQQTLKGHSGA 599


>gi|332993975|gb|AEF04030.1| acylaminoacyl-peptidase [Alteromonas sp. SN2]
          Length = 692

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 105/258 (40%), Gaps = 20/258 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  +++  ++ +L  +  DG+       S  +  F P FSP+  K+AY +  +   ++VY
Sbjct: 63  SMDIMTDSMRRNLWTIALDGS-AHLPILSDSKNHFNPVFSPDGAKMAYLSSKEGK-VQVY 120

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTN 299
           L D   +    R+ +         FS +GK    ++    +A  ++++D +    +    
Sbjct: 121 LKDLASNS-TTRVTDVAMRPSGMSFSPDGKYLAFAMFTPTKAKPLFNLDFKPKGAKWAET 179

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             +I+   ++  D   +     R G  Q+YV+ + G   ++I+  +        WS  G 
Sbjct: 180 PQYID-QTNFQRDGMGM----KRPGNMQIYVVPTIGGTPRQITSGEHDHAGTIAWSDNGQ 234

Query: 360 LIAFTKFSGE-------KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD 411
            I  +  + +          +  +    S+   L +     ++P  SP+G  + F   +D
Sbjct: 235 QIIISANTSDEADFDMLNSDLFSIDVKTSKVTRLTDMSGPERSPHLSPNGNKIAFVGNED 294

Query: 412 GDTGSK---LYSIDLNGR 426
               ++   LY ++ +G 
Sbjct: 295 NGKSNQLSHLYVMNSDGT 312



 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 84/231 (36%), Gaps = 22/231 (9%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-------A 281
                   +++Y++ T      +             +S NG++ +IS    +        
Sbjct: 193 MGMKRPGNMQIYVVPTIGGTPRQITSGEHDHAGTIAWSDNGQQIIISANTSDEADFDMLN 252

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-----EQLYVMQSNGS 336
            D++S+D++++   RLT+      S   SP+ ++I F  + +         LYVM S+G+
Sbjct: 253 SDLFSIDVKTSKVTRLTDMSGPERSPHLSPNGNKIAFVGNEDNGKSNQLSHLYVMNSDGT 312

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--- 393
             + ++ + + S     W+  G  + F+     K ++  +   G       +        
Sbjct: 313 GIENLTSELDRSVGAIKWADNGKGVYFSYDDMGKKSVAYVSLSGKISTKTSDLGGTSLGR 372

Query: 394 -----APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                    +P G  +  +    GD  + L  +   G+ + L +      D
Sbjct: 373 PYTSGDYDVTPKGSVVYTASM--GDRPADLAIVTSKGKVKQLTDLNGDVFD 421



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 8/110 (7%)

Query: 305 ISASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +   +PD   +V+E           +  L+ +  +GS    I  D + ++F+PV+SP G
Sbjct: 46  TNPVVTPDGKHVVYERRSMDIMTDSMRRNLWTIALDGSAHLPILSDSK-NHFNPVFSPDG 104

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFS 407
             +A+      K  + +     +    + + +      ++SP G+ L F+
Sbjct: 105 AKMAYLSSKEGKVQVYLKDLASNSTTRVTDVAMRPSGMSFSPDGKYLAFA 154



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 46/110 (41%), Gaps = 16/110 (14%)

Query: 350 FDPVWSPQGDLIAFTKFS------GEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGR 402
            +PV +P G  + + + S        +  +  +  DGS    +L +  N   P +SP G 
Sbjct: 46  TNPVVTPDGKHVVYERRSMDIMTDSMRRNLWTIALDGSAHLPILSDSKNHFNPVFSPDGA 105

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-------YASDPQWVGF 445
            + +   K+G    ++Y  DL   + T +   A       ++ D +++ F
Sbjct: 106 KMAYLSSKEGKV--QVYLKDLASNSTTRVTDVAMRPSGMSFSPDGKYLAF 153



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 69/210 (32%), Gaps = 29/210 (13%)

Query: 102 DWNSLGAQVLVTGRVIKEGK-DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD 160
            W+  G Q++++     E   D L  +    DVK  K        +  +   +  H   +
Sbjct: 228 AWSDNGQQIIISANTSDEADFDMLNSDLFSIDVKTSKV----TRLTDMSGPERSPHLSPN 283

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQILFEPRF 219
                         ++I FV         + S L VM+ DG  I  LT   D+ +   ++
Sbjct: 284 -------------GNKIAFVGNEDNGKSNQLSHLYVMNSDGTGIENLTSELDRSVGAIKW 330

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-P------RFSSNGKRA 272
           + N + V ++  D       Y+  +   +   +  +     L  P        +  G   
Sbjct: 331 ADNGKGVYFSYDDMGKKSVAYV--SLSGKISTKTSDLGGTSLGRPYTSGDYDVTPKG-SV 387

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +    +     ++       ++LT+   
Sbjct: 388 VYTASMGDRPADLAIVTSKGKVKQLTDLNG 417


>gi|91216538|ref|ZP_01253504.1| Acylaminoacyl-peptidase [Psychroflexus torquis ATCC 700755]
 gi|91185332|gb|EAS71709.1| Acylaminoacyl-peptidase [Psychroflexus torquis ATCC 700755]
          Length = 705

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 96/284 (33%), Gaps = 58/284 (20%)

Query: 212 QILFEPRFSPNQQKVAYATYDDE---DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSS 267
           Q++  P  SP+ + + Y  +  +   D   V L     D      I +         +S 
Sbjct: 63  QMVGNPEISPDGETIIYERHQFDVMTDSRLVNLWQISFDGETHYPITSGTKYHGNVNWSP 122

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------ 321
            G +   +  +D +  +Y   ++S  T  LTN      + S+SPD +Q++F         
Sbjct: 123 QGDKFAFTSNQDGSNQLYVYWVESKTTAALTNFTESPSNISWSPDGTQLLFSKFVPESSK 182

Query: 322 -----------------------------------REGKEQLYVMQSNGSDQKRISQDKE 346
                                              ++G   ++V+ + G   ++++    
Sbjct: 183 AIQPKIPSPPNGAEWEKEADVIDKAVYRRDGGGYVQDGYSHIFVISAEGGTARQLTS-GS 241

Query: 347 ASYFDPVWSPQGDLIAFT-------KFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWS 398
             +    W+P G  I +T       +       I     +    + L        +P  S
Sbjct: 242 HQFGSSSWTPDGKHILYTVNKSEDAEVDPNNEQIFEQHIETGVSKQLTSTRGPFYSPKVS 301

Query: 399 PSGRSLIFSRKKD---GDTGSKLYSIDLNGRNETLINTPAYASD 439
           P G+ + ++   D   G   +KLY +  +G    +++   +A D
Sbjct: 302 PDGKHIAYTGFDDKFVGYQLTKLYLMSRDGAELEILS-KGFAQD 344



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/305 (18%), Positives = 112/305 (36%), Gaps = 63/305 (20%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVY 240
             V++     +L  +  DG    Y   S  +      +SP   K A+ +  D  + L VY
Sbjct: 84  FDVMTDSRLVNLWQISFDGE-THYPITSGTKYHGNVNWSPQGDKFAFTSNQDGSNQLYVY 142

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS------------------------- 275
            ++++   A        S I    +S +G + L S                         
Sbjct: 143 WVESKTTAALTNFTESPSNI---SWSPDGTQLLFSKFVPESSKAIQPKIPSPPNGAEWEK 199

Query: 276 ----------------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                             +D    I+ +  +     +LT+      S+S++PD   I++ 
Sbjct: 200 EADVIDKAVYRRDGGGYVQDGYSHIFVISAEGGTARQLTSGSHQFGSSSWTPDGKHILYT 259

Query: 320 SDRE-------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF- 371
            ++          EQ++         K+++      ++ P  SP G  IA+T F  +   
Sbjct: 260 VNKSEDAEVDPNNEQIFEQHIETGVSKQLTS-TRGPFYSPKVSPDGKHIAYTGFDDKFVG 318

Query: 372 ----AIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                + +M +DG++  +L +    ++ + TW+   +S+ F   ++G   SK+  I+L G
Sbjct: 319 YQLTKLYLMSRDGAELEILSKGFAQDISSITWAKDAKSIYFRFDEEG--NSKVGQINLKG 376

Query: 426 RNETL 430
              T+
Sbjct: 377 EVSTV 381



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 76/215 (35%), Gaps = 21/215 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL------RVYLMDTRI 246
           + V+  +G   R LT    Q      ++P+ + + Y     ED        +++      
Sbjct: 224 IFVISAEGGTARQLTSGSHQF-GSSSWTPDGKHILYTVNKSEDAEVDPNNEQIFEQHIET 282

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-----EAMDIYSVDLQSNATERLTNTL 301
               K++ + R    +P+ S +GK    +   D     +   +Y +       E L+   
Sbjct: 283 G-VSKQLTSTRGPFYSPKVSPDGKHIAYTGFDDKFVGYQLTKLYLMSRDGAELEILSKGF 341

Query: 302 FINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS----YFDPVWS- 355
             +IS+ +++ D+  I F  D EG  ++  +   G            S    Y    +S 
Sbjct: 342 AQDISSITWAKDAKSIYFRFDEEGNSKVGQINLKGEVSTVAENLGSPSIGRPYGGGTYSV 401

Query: 356 PQGDLIAFTKF-SGEKFAIGVMK-KDGSQERLLVE 388
                +AF+   +     + V+  K   + + L  
Sbjct: 402 SDKGKLAFSYVTTSTPAELAVVSQKSTRETKRLTN 436



 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 58/158 (36%), Gaps = 17/158 (10%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVS---------GIIKNSLCVMDRDGANIRYLTPSRDQ 212
           + + +T  +G F S  +      ++         G     L +M RDGA +  L+    Q
Sbjct: 284 VSKQLTSTRGPFYSPKVSPDGKHIAYTGFDDKFVGYQLTKLYLMSRDGAELEILSKGFAQ 343

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP------RFS 266
            +    ++ + + + Y  +D+E   +V  ++ + + +          I  P        S
Sbjct: 344 DISSITWAKDAKSI-YFRFDEEGNSKVGQINLKGEVSTVAENLGSPSIGRPYGGGTYSVS 402

Query: 267 SNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFI 303
             GK A   V      ++  V    +  T+RLTN    
Sbjct: 403 DKGKLAFSYVTTSTPAELAVVSQKSTRETKRLTNLNAN 440


>gi|262194673|ref|YP_003265882.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262078020|gb|ACY13989.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1626

 Score =  112 bits (279), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 101/264 (38%), Gaps = 17/264 (6%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             +VS     ++ V   DG +   +    D  +   RFSP+  ++  A++D      + L 
Sbjct: 1093 RIVSASQDKTVRVWRADGTDEPLVLYGHDDAVSSVRFSPDGARIVSASWDT----TLRLW 1148

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            ++     P         + + RFS +G   + S   D  M ++  D  +           
Sbjct: 1149 NSDGSGHPHVFPGHEDQVTSARFSPDGAHIV-SASHDGTMRLWRSD-GTGEPVVFRGHDS 1206

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               SA +SPD   ++  S     + + V +++GS   ++ +  +        SP G    
Sbjct: 1207 GLTSARFSPDGVHLISAST---DQSVRVWRADGSRPPQVLRGHDDVVESVALSPDGGYFV 1263

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYS 420
               + G    I +    GS + LL++    +  + ++SP G  L+ S     D   +++S
Sbjct: 1264 SASWDGS---IRMWPLAGSGQPLLLDGHTREALSASFSPDGTRLVSSSW---DKDLRVHS 1317

Query: 421  IDLNGRNETLINTPAYASDPQWVG 444
             + +G+   L    A     ++  
Sbjct: 1318 ANGSGQPLVLRGHEAAVWHAEFSP 1341



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 93/238 (39%), Gaps = 10/238 (4%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             E   +++      E +VS  I  S+ + + DG+    +    +  +    FSP+  +V 
Sbjct: 1330 HEAAVWHAEFSPSGERIVSASIDKSMRIWNADGSGQPLILRGHEDRVSSAGFSPDGDRVV 1389

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A+YD      V + +         +      + + + S +G R L S   D+++ I+++
Sbjct: 1390 SASYDK----TVRVWNADGSGEAMVLRGHYDRVTSAQVSPDGARVL-SASWDKSIRIWNI 1444

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            D          +   +  SA +SPD  +IV  S     + + V +++GS+   + +  E 
Sbjct: 1445 DGSGRPAILRGHHDAV-WSARFSPDGERIVSASF---DKSVRVWRTDGSEPPIVLRGHED 1500

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  +SP G  I  +    +   I      G    L   D+ +    +SP G  + 
Sbjct: 1501 WVMWAEFSPDGRYIV-SASKDKTIRIWRSDGSGEPVVLRGHDAWVNKARFSPDGGRIA 1557



 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 103/279 (36%), Gaps = 21/279 (7%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             + G  ++R       ++S     S+ V   DG+    +    D ++     SP+     
Sbjct: 1204 HDSGLTSARFSPDGVHLISASTDQSVRVWRADGSRPPQVLRGHDDVVESVALSPDGGYFV 1263

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A++D      + +        P  +       L+  FS +G R + S   D+ + ++S 
Sbjct: 1264 SASWDG----SIRMWPLAGSGQPLLLDGHTREALSASFSPDGTRLV-SSSWDKDLRVHSA 1318

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +  S     L         A +SP   +IV  S     + + +  ++GS Q  I +  E 
Sbjct: 1319 N-GSGQPLVLRGHEAAVWHAEFSPSGERIVSASI---DKSMRIWNADGSGQPLILRGHED 1374

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
                  +SP GD +    +      + V   DGS E +++     +  +   SP G  ++
Sbjct: 1375 RVSSAGFSPDGDRVVSASYDKT---VRVWNADGSGEAMVLRGHYDRVTSAQVSPDGARVL 1431

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             +     D   ++++ID +GR   L        D  W  
Sbjct: 1432 SASW---DKSIRIWNIDGSGRPAIL----RGHHDAVWSA 1463



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 102/266 (38%), Gaps = 19/266 (7%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            + S   G ++ +  ++  D      +    +  +F   +SP+  ++  A++D      V 
Sbjct: 967  TASPPPGAVQEAKRLLHSD--IALRVFLGHEDAVFSVSYSPDGSRIVSASHDK----TVR 1020

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + +         +   R  + +  FS +G   + S  +D  + ++  D  +   E L   
Sbjct: 1021 VWNADGSGEAIVLRGHRGAVSSANFSPDGAYIV-SASEDSTIRVWRAD-GTGQAEILRGH 1078

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 SA++SPD S+IV  S     + + V +++G+D+  +    + +     +SP G  
Sbjct: 1079 EGAVYSANFSPDGSRIVSASQ---DKTVRVWRADGTDEPLVLYGHDDAVSSVRFSPDGAR 1135

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKL 418
            I    +      + +   DGS    +      Q  +  +SP G  ++ S   DG    +L
Sbjct: 1136 IVSASWDTT---LRLWNSDGSGHPHVFPGHEDQVTSARFSPDGAHIV-SASHDGTM--RL 1189

Query: 419  YSIDLNGRNETLINTPAYASDPQWVG 444
            +  D  G         +  +  ++  
Sbjct: 1190 WRSDGTGEPVVFRGHDSGLTSARFSP 1215



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 92/265 (34%), Gaps = 13/265 (4%)

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            +  E   F+         +VS     ++ V + DG+    +       +    FSP+   
Sbjct: 992  LGHEDAVFSVSYSPDGSRIVSASHDKTVRVWNADGSGEAIVLRGHRGAVSSANFSPDGAY 1051

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +  A+ D      + +         + +      + +  FS +G R + S  +D+ + ++
Sbjct: 1052 IVSASEDS----TIRVWRADGTGQAEILRGHEGAVYSANFSPDGSRIV-SASQDKTVRVW 1106

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
              D  ++    L        S  +SPD ++IV  S       L +  S+GS    +    
Sbjct: 1107 RAD-GTDEPLVLYGHDDAVSSVRFSPDGARIVSAS---WDTTLRLWNSDGSGHPHVFPGH 1162

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            E       +SP G  I      G    +      G        DS L +  +SP G  LI
Sbjct: 1163 EDQVTSARFSPDGAHIVSASHDGT-MRLWRSDGTGEPVVFRGHDSGLTSARFSPDGVHLI 1221

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETL 430
             +     D   +++  D +   + L
Sbjct: 1222 SAST---DQSVRVWRADGSRPPQVL 1243



 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 100/262 (38%), Gaps = 17/262 (6%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VS    +++ V   DG     +    +  ++   FSP+  ++  A+ D      V +   
Sbjct: 1053 VSASEDSTIRVWRADGTGQAEILRGHEGAVYSANFSPDGSRIVSASQDK----TVRVWRA 1108

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 P  +      + + RFS +G R + S   D  + +++ D  S             
Sbjct: 1109 DGTDEPLVLYGHDDAVSSVRFSPDGARIV-SASWDTTLRLWNSD-GSGHPHVFPGHEDQV 1166

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             SA +SPD + IV  S  +G  +L+  +S+G+ +  + +  ++      +SP G  +   
Sbjct: 1167 TSARFSPDGAHIVSASH-DGTMRLW--RSDGTGEPVVFRGHDSGLTSARFSPDGVHLISA 1223

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    + V + DGS+   ++   +   ++   SP G   + +     D   +++ + 
Sbjct: 1224 STDQS---VRVWRADGSRPPQVLRGHDDVVESVALSPDGGYFVSASW---DGSIRMWPLA 1277

Query: 423  LNGRNETLINTPAYASDPQWVG 444
             +G+   L      A    +  
Sbjct: 1278 GSGQPLLLDGHTREALSASFSP 1299



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 101/264 (38%), Gaps = 19/264 (7%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             +VS     +L + + DG+   ++ P  +  +   RFSP+   +  A++D      + L 
Sbjct: 1135 RIVSASWDTTLRLWNSDGSGHPHVFPGHEDQVTSARFSPDGAHIVSASHDG----TMRLW 1190

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             +     P       S + + RFS +G    IS   D+++ ++  D  S   + L     
Sbjct: 1191 RSDGTGEPVVFRGHDSGLTSARFSPDGVHL-ISASTDQSVRVWRAD-GSRPPQVLRGHDD 1248

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +  S + SPD    V  S       + +    GS Q  +            +SP G  + 
Sbjct: 1249 VVESVALSPDGGYFVSAS---WDGSIRMWPLAGSGQPLLLDGHTREALSASFSPDGTRLV 1305

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             + +  +   +      G    L   ++ +    +SPSG  ++ +     D   ++++ D
Sbjct: 1306 SSSWD-KDLRVHSANGSGQPLVLRGHEAAVWHAEFSPSGERIVSASI---DKSMRIWNAD 1361

Query: 423  LNGRNETL------INTPAYASDP 440
             +G+   L      +++  ++ D 
Sbjct: 1362 GSGQPLILRGHEDRVSSAGFSPDG 1385



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 6/139 (4%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             V+S     S+ + + DG+    +       ++  RFSP+ +++  A++D      V + 
Sbjct: 1429 RVLSASWDKSIRIWNIDGSGRPAILRGHHDAVWSARFSPDGERIVSASFDK----SVRVW 1484

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             T     P  +      ++   FS +G+  + S  KD+ + I+  D  S     L     
Sbjct: 1485 RTDGSEPPIVLRGHEDWVMWAEFSPDGRYIV-SASKDKTIRIWRSD-GSGEPVVLRGHDA 1542

Query: 303  INISASYSPDSSQIVFESD 321
                A +SPD  +I   +D
Sbjct: 1543 WVNKARFSPDGGRIASAAD 1561



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 5/118 (4%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                 +++R     E +VS     S+ V   DG+    +    +  +    FSP+ + + 
Sbjct: 1456 HHDAVWSARFSPDGERIVSASFDKSVRVWRTDGSEPPIVLRGHEDWVMWAEFSPDGRYIV 1515

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             A+ D      + +  +     P  +    + +   RFS +G R   S   D  + ++
Sbjct: 1516 SASKDK----TIRIWRSDGSGEPVVLRGHDAWVNKARFSPDGGRIA-SAADDRTVRVW 1568


>gi|218961137|ref|YP_001740912.1| putative tricorn protease (tri); putative signal peptide
           [Candidatus Cloacamonas acidaminovorans]
 gi|167729794|emb|CAO80706.1| putative tricorn protease (tri); putative signal peptide
           [Candidatus Cloacamonas acidaminovorans]
          Length = 1053

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 76/181 (41%), Gaps = 16/181 (8%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              P  S +G+        D    ++ V        R+TNT     +  +SPD   + F 
Sbjct: 30  TSEPAISPDGEIVCYVYSND----LWLVPFAGGIPRRITNTTSYEWNPQFSPDGKMLAFS 85

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKK 378
           SDR G+  +Y+M + G + K ++ +   S+    W      +  TK+S     +   +  
Sbjct: 86  SDRSGQNLIYIMPATGGEAKAVNYE---SFRISEWFSDSQNLLCTKYSPRWGLSFYKVPI 142

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIF-----SRK--KDGDTGSKLYSIDLNGRNETLI 431
           +GS+  LL E  +  A T SP  + ++F     SR+    G    +L+ IDL  +  T +
Sbjct: 143 NGSRPVLLAEIGSSFA-TLSPDNKQIVFQKGGYSRREAYRGSGNGELWLIDLPTKKYTKL 201

Query: 432 N 432
            
Sbjct: 202 T 202



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 72/218 (33%), Gaps = 25/218 (11%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           L         EP  SP+ + V Y   +D        +       P+RI N  S    P+F
Sbjct: 22  LVAQEAYFTSEPAISPDGEIVCYVYSND------LWLVPFAGGIPRRITNTTSYEWNPQF 75

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDRE 323
           S +GK    S  +     IY +       + + N     IS  +  DS  ++    S R 
Sbjct: 76  SPDGKMLAFSSDRSGQNLIYIMPATGGEAKAV-NYESFRIS-EWFSDSQNLLCTKYSPRW 133

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---------FSGEKFAIG 374
           G    Y +  NGS    +++   +       SP    I F K                + 
Sbjct: 134 GLS-FYKVPINGSRPVLLAEIGSSFAT---LSPDNKQIVFQKGGYSRREAYRGSGNGELW 189

Query: 375 VMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKD 411
           ++     +   L      +  P++S +G +L +     
Sbjct: 190 LIDLPTKKYTKLTNTELSELYPSFSQTG-ALYYCASDG 226



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 89/265 (33%), Gaps = 58/265 (21%)

Query: 166 ITGEKGDFNS-RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           +  ++  F S   +     +V  +  N L ++   G   R +T +     + P+FSP+ +
Sbjct: 22  LVAQEAYFTSEPAISPDGEIVCYVYSNDLWLVPFAGGIPRRITNTTS-YEWNPQFSPDGK 80

Query: 225 KVAYATYDDEDILRVYLMDTR-----IDRAPKRIGNFRSMI-------LAPRF------- 265
            +A+++      L   +  T      ++    RI  + S          +PR+       
Sbjct: 81  MLAFSSDRSGQNLIYIMPATGGEAKAVNYESFRISEWFSDSQNLLCTKYSPRWGLSFYKV 140

Query: 266 --------------------SSNGKRALI---------SVQKDEAMDIYSVDLQSNATER 296
                               S + K+ +          + +     +++ +DL +    +
Sbjct: 141 PINGSRPVLLAEIGSSFATLSPDNKQIVFQKGGYSRREAYRGSGNGELWLIDLPTKKYTK 200

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQ-SNGSDQKRISQDKEASYFDPVW 354
           LTNT    +  S+S   +     SD  GK  Q+  +   +    ++I+  K  S      
Sbjct: 201 LTNTELSELYPSFSQTGALYYCASD--GKCFQINKVNKLSFRKPEKITNLKPFSARRISL 258

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKD 379
           S   D + F  F+     I      
Sbjct: 259 SRNNDRLVFEYFN----TIYKYDPT 279



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 74/197 (37%), Gaps = 13/197 (6%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-- 304
               K+I      I   +F  + ++ +IS   +  + +++    S  T    +    +  
Sbjct: 338 GGEAKQISFDHGSIFGLQF-LDKRQMVISKLDNGIVKLFTATADSVITLSPVDWFGADSL 396

Query: 305 -ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            ++  Y   + +  F+ D   + Q   +  +G    R      A   +  ++  G    +
Sbjct: 397 CVTELYKDKNGRWYFKYDDYYRHQKIAIADSGFVNIRPVNTPWAVTTNFAFTEDGRYAVY 456

Query: 364 TKFSGEKF--AIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                + +   + +      S +RLL ++   Q   W+   +S++ +R  D      +Y 
Sbjct: 457 GTLREDNYVKELYLYDVQADSSKRLLADNGWWQNLFWTSDNKSILLTRNSD------IYR 510

Query: 421 IDLNGRNETLINTPAYA 437
           +DL  R+E  ++T  + 
Sbjct: 511 LDLVPRDEFELDTDPWD 527


>gi|255936369|ref|XP_002559211.1| Pc13g07820 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583831|emb|CAP91851.1| Pc13g07820 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 680

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 52/316 (16%), Positives = 106/316 (33%), Gaps = 83/316 (26%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           + L + + DG N R L        +   FSP+ + +++ +  D D               
Sbjct: 77  SELYIANADGTNERPLLKD-PGYEYHAEFSPDSEWISFTSERDGDGNSDIWRVHPDGSDL 135

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFI------ 303
           + I    +   +   S NG  A      +    +I+  +L++ A   +T+T         
Sbjct: 136 QPIVTSPAAEDSVVISPNGTLAAYVSTANTYNANIWVKNLETGAEWNITDTPNNRPREDM 195

Query: 304 ---NISASYSPDSSQIVFESDREGKEQ--------------------LYVMQSNGSDQKR 340
              +   ++SPD + + F SDR  + +                    +Y+++ NGSD +R
Sbjct: 196 MRGHFRPAWSPDGNWLAFSSDRNTRWEGHGNLTYLGLAGWEHTQELDIYIIRPNGSDLRR 255

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFS--------------GEKFAIGVMKKDGSQERL- 385
           ++         P WSP G  + F + +                   I  +  +G+  R+ 
Sbjct: 256 VAHRDSHCLGSPKWSPDGQRLIFYEMTRNETWDAHRPETVADANSTIVSVGINGNDRRIE 315

Query: 386 -----------------------------------LVEDSNLQAPTWSPSGRSLIF--SR 408
                                                 ++ +++P+WSP G+ +++    
Sbjct: 316 VGGPGVKTFPQYVTNSTIGYHLKGGNKEGLYLTNGTYSNTTIRSPSWSPDGKYVVYEKVS 375

Query: 409 KKDGDTGSKLYSIDLN 424
                   +LYS D +
Sbjct: 376 WSIRPLFKELYSWDTD 391



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 72/211 (34%), Gaps = 36/211 (17%)

Query: 269 GKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EG 324
           GK+ ++ + +      ++Y  +        L         A +SPDS  I F S+R  +G
Sbjct: 62  GKKGVLLMNRIAPGTSELYIANADGTNERPLLKDPGYEYHAEFSPDSEWISFTSERDGDG 121

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQE 383
              ++ +  +GSD + I     A+    V SP G L A+   +      I V   +   E
Sbjct: 122 NSDIWRVHPDGSDLQPIVT-SPAAEDSVVISPNGTLAAYVSTANTYNANIWVKNLETGAE 180

Query: 384 RLLVEDSNLQ----------APTWSPSGRSLIFSRKKDGDTGS----------------- 416
             + +  N +           P WSP G  L FS  ++                      
Sbjct: 181 WNITDTPNNRPREDMMRGHFRPAWSPDGNWLAFSSDRNTRWEGHGNLTYLGLAGWEHTQE 240

Query: 417 -KLYSIDLNGRNETLINTPAYA--SDPQWVG 444
             +Y I  NG +   +          P+W  
Sbjct: 241 LDIYIIRPNGSDLRRVAHRDSHCLGSPKWSP 271



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/388 (11%), Positives = 118/388 (30%), Gaps = 124/388 (31%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           + + +  + ++  +      +  + ++  +G+++R +       L  P++SP+ Q++ + 
Sbjct: 220 RWEGHGNLTYLGLAGWEHTQELDIYIIRPNGSDLRRVAHRDSHCLGSPKWSPDGQRLIFY 279

Query: 230 TYD-------------------------DEDILRVYLMDTRIDRAPKRIGNF-------- 256
                                       + +  R+ +    +   P+ + N         
Sbjct: 280 EMTRNETWDAHRPETVADANSTIVSVGINGNDRRIEVGGPGVKTFPQYVTNSTIGYHLKG 339

Query: 257 --------------RSMILAPRFSSNGK-------------------------------- 270
                          + I +P +S +GK                                
Sbjct: 340 GNKEGLYLTNGTYSNTTIRSPSWSPDGKYVVYEKVSWSIRPLFKELYSWDTDWEYRFTDV 399

Query: 271 --------RALISVQKDEAMDIYSVDLQSNAT--------------ERLTNTLFINISAS 308
                   R  ++ ++     I + DL+                    + + L    + S
Sbjct: 400 FPQLSSDDRVAVTEKQIGNSSIATFDLEDRQVSLIYKPDNTSLLDTTLIQDGLAGAYNPS 459

Query: 309 YSPDSSQIVF-------ESDREGKEQLY------VMQSNGSDQKRISQDKEASYFDPVWS 355
           +SPD   +VF         D  G   +        +    +    ++  K+ +   P +S
Sbjct: 460 WSPDGEWVVFGVGAWFEARDWRGGWIVRSTANASYIDVLTNSNLNLTGTKDLNTGFPSFS 519

Query: 356 PQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
             G  + +  +         G +  + ++  +  +   L    +   P++SP G  ++F+
Sbjct: 520 HDGKKVVYRVWGADTAKYGDGTEIGLRIIDIETRETTQLTSGWD-NLPSFSPDGEFIVFT 578

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPA 435
           RK    T  ++  I  +G +  ++ +  
Sbjct: 579 RKVA-PTNYEICIIRPDGSDFRILTSSG 605



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 83/221 (37%), Gaps = 38/221 (17%)

Query: 214 LFEPRFSPNQQKVAY---ATYDDEDILRVYL---------MDTRIDRAPKRIGNFRSMIL 261
            + P +SP+ + V +   A ++  D    ++         +D   +      G       
Sbjct: 455 AYNPSWSPDGEWVVFGVGAWFEARDWRGGWIVRSTANASYIDVLTNSNLNLTGTKDLNTG 514

Query: 262 APRFSSNGKRALISVQKDEAMD--------IYSVDLQSNATERLTNTLFINISASYSPDS 313
            P FS +GK+ +  V   +           +  +D+++  T +LT+    +   S+SPD 
Sbjct: 515 FPSFSHDGKKVVYRVWGADTAKYGDGTEIGLRIIDIETRETTQLTS--GWDNLPSFSPDG 572

Query: 314 SQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             IVF         ++ +++ +GSD + ++    A+    VW   G ++  +   G ++ 
Sbjct: 573 EFIVFTRKVAPTNYEICIIRPDGSDFRILTSSG-ANDAHAVWRQDGKIMWSSGMYGFQYE 631

Query: 373 -------------IGVMKKDGSQERLLVED-SNLQAPTWSP 399
                        I +M  DGS +  L         P + P
Sbjct: 632 CALYDETFQPYGQIIIMDSDGSNKCPLTNSIWEDSMPLFLP 672



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 57/141 (40%), Gaps = 21/141 (14%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGS 381
           G  +LY+  ++G++++ + +D    Y    +SP  + I+FT          I  +  DGS
Sbjct: 75  GTSELYIANADGTNERPLLKDPGYEYHAE-FSPDSEWISFTSERDGDGNSDIWRVHPDGS 133

Query: 382 QER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTP----- 434
             + ++   +   +   SP+G    +    +    + ++  +L  G    + +TP     
Sbjct: 134 DLQPIVTSPAAEDSVVISPNGTLAAYVSTAN-TYNANIWVKNLETGAEWNITDTPNNRPR 192

Query: 435 ----------AYASDPQWVGF 445
                     A++ D  W+ F
Sbjct: 193 EDMMRGHFRPAWSPDGNWLAF 213



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 26/160 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           LT ++D     P FS + +KV Y       A Y D   + + ++D       +    + +
Sbjct: 505 LTGTKDLNTGFPSFSHDGKKVVYRVWGADTAKYGDGTEIGLRIIDIETRETTQLTSGWDN 564

Query: 259 MILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +   P FS +G+  + + +      +I  +    +    LT++   +  A +  D  +I+
Sbjct: 565 L---PSFSPDGEFIVFTRKVAPTNYEICIIRPDGSDFRILTSSGANDAHAVWRQDG-KIM 620

Query: 318 FESDREG--------------KEQLYVMQSNGSDQKRISQ 343
           + S   G                Q+ +M S+GS++  ++ 
Sbjct: 621 WSSGMYGFQYECALYDETFQPYGQIIIMDSDGSNKCPLTN 660



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 47/167 (28%), Gaps = 27/167 (16%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDR----DGANI---------RYLTPSRDQILFEP 217
           G  +    F S S     +   +   D     DG  I         R  T         P
Sbjct: 507 GTKDLNTGFPSFSHDGKKVVYRVWGADTAKYGDGTEIGLRIIDIETRETTQLTSGWDNLP 566

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR------ 271
            FSP+ + + +          + ++        + + +  +      +  +GK       
Sbjct: 567 SFSPDGEFIVFTRKVAPTNYEICIIRPDGSDF-RILTSSGANDAHAVWRQDGKIMWSSGM 625

Query: 272 -------ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                  AL          I  +D   +    LTN+++ +    + P
Sbjct: 626 YGFQYECALYDETFQPYGQIIIMDSDGSNKCPLTNSIWEDSMPLFLP 672


>gi|166368999|ref|YP_001661272.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
 gi|166091372|dbj|BAG06080.1| serine/threonine protein kinase [Microcystis aeruginosa NIES-843]
          Length = 709

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 112/356 (31%), Gaps = 44/356 (12%)

Query: 77  DVFNLISQDSFKQKITNPD---------SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
             F     +     I +P          S   F D    G    V   V+     R    
Sbjct: 385 GYFKSQEVNPQIAPINSPTNKLTTRKKISEHSFLDKTLTGHSDSVQ-SVVYSPDGRYLAS 443

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKI-AHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
                     + I     ++    R +  H  SD +   +    G            + S
Sbjct: 444 ------GSGDKTIKISGVATGKQLRTLTGH--SDTVSSLVYSPDG----------RYLAS 485

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    ++ + +                ++   +SP+ + +A  ++D      + + +   
Sbjct: 486 GSNDKTIKIWEVATGKQLRTLTGHYGEVYSVVYSPDGRYLASGSWDK----TIKIWEVAT 541

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +  + +    S +L+  +S +G+    S   D+ + I+ V         LT       S
Sbjct: 542 GKQLRTLTGHSSPVLSVVYSPDGRYLA-SGNGDKTIKIWEV-ATGKQLRTLTGHSGSVWS 599

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             YSPD S +       G +   + +     Q R         +  V+SP G  +A   +
Sbjct: 600 VVYSPDGSYLA---SGNGDKTTKIWEVATGKQLRTLTGHSKVVWSVVYSPDGRYLASGSW 656

Query: 367 SGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +   I  +   G Q R L    S + +  +SP GR L       GD   K++ +
Sbjct: 657 D-KTIKIWEV-ATGKQLRTLTGHSSPVYSVVYSPDGRYLA---SGSGDETIKIWRV 707



 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 99/290 (34%), Gaps = 23/290 (7%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           H+  D   +++TG      S +       + SG    ++ +                  +
Sbjct: 415 HSFLD---KTLTGHSDSVQSVVYSPDGRYLASGSGDKTIKISGVATGKQLRTLTGHSDTV 471

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               +SP+ + +A  + D      + + +    +  + +      + +  +S +G+    
Sbjct: 472 SSLVYSPDGRYLASGSNDK----TIKIWEVATGKQLRTLTGHYGEVYSVVYSPDGRYLA- 526

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S   D+ + I+ V         LT      +S  YSPD   +       G + + + +  
Sbjct: 527 SGSWDKTIKIWEV-ATGKQLRTLTGHSSPVLSVVYSPDGRYLA---SGNGDKTIKIWEVA 582

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQ 393
              Q R       S +  V+SP G  +A +    +   I  +   G Q R L   S  + 
Sbjct: 583 TGKQLRTLTGHSGSVWSVVYSPDGSYLA-SGNGDKTTKIWEV-ATGKQLRTLTGHSKVVW 640

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           +  +SP GR L        D   K++ +   G+    +      S P + 
Sbjct: 641 SVVYSPDGRYLASGSW---DKTIKIWEV-ATGKQLRTLT---GHSSPVYS 683


>gi|294672803|ref|YP_003573419.1| mucin-desulfating sulfatase [Prevotella ruminicola 23]
 gi|294472399|gb|ADE81788.1| mucin-desulfating sulfatase [Prevotella ruminicola 23]
          Length = 1080

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 53/313 (16%), Positives = 109/313 (34%), Gaps = 40/313 (12%)

Query: 163 YQSITGEKGDFNSRILFVSESV----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           Y  +T   G+  + +                  ++     DG   + +T  +   +    
Sbjct: 206 YTKLTDFAGEDRTPVWTADGKGYYYLSEQDGTFNVWYRSLDGKQNQQITRHKTNPVRFLT 265

Query: 219 --------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
                   +  + +            + + ++  + DR   R    +        S +GK
Sbjct: 266 AADNGTLCYGYDGEIYTVRQGSQPQRVNINIVSDKTDRELIREVLTKGATEVVA-SPSGK 324

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                +      ++Y        T R+T+T  +  + S+SPD   + + S+R G   +Y 
Sbjct: 325 EVAFVI----HGEVYVTATDYKTTRRITDTPELERNLSFSPDGRSLAYASERNGCWNIYQ 380

Query: 331 MQSNGSDQKRISQDK----------EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                 D+K+ +               + F P +SP    +AF +  G    I ++    
Sbjct: 381 TTIKNKDEKQFTYATDLTEEQLTKQNHTSFYPRYSPDSKELAFFEDRGT---IRIINLAT 437

Query: 381 SQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNE--TL 430
            + R +++  +L + +       WSP  R L+ +   DG      +  ID +G+ +   L
Sbjct: 438 KKIRTVMDGKDLFSYSDGDIDFEWSPDSRWLLATYYGDGGYHHDDIALIDASGKQKPYNL 497

Query: 431 INTPAYASDPQWV 443
            N+  Y  +P WV
Sbjct: 498 TNSSYYDMNPHWV 510



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 79/234 (33%), Gaps = 74/234 (31%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G+    S + D    +++V +     ++LT     + +  +SPD S+I F SDRE
Sbjct: 30  AISPDGQTIAFSYKGD----LFTVPVTGGTAKQLTTNPAYDYNPVWSPDGSKIAFASDRE 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFS-----------GEKF 371
           G   ++VM S G   ++I+    +S+F  V +    D + F+              G+  
Sbjct: 86  GGINVWVMPSKGGQPQQITT---SSHFKNVLTFADNDHVLFSMADMPTRQSIIPSLGKFP 142

Query: 372 AIGVMKKDGSQERL---------------------------------------------- 385
            +  +   G + RL                                              
Sbjct: 143 QVYEVSVKGGRPRLFSGLMMADININRKTGDVLYHDIKGSEDMYRKHHQSAICRDIWMLS 202

Query: 386 ------LVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                 L +     + P W+  G+   +  ++DG     ++   L+G+    I 
Sbjct: 203 KGKYTKLTDFAGEDRTPVWTADGKGYYYLSEQDGTF--NVWYRSLDGKQNQQIT 254



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/365 (12%), Positives = 106/365 (29%), Gaps = 119/365 (32%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  L  +   G   + LT       + P +SP+  K+A+A+ D E  + V++M ++  
Sbjct: 41  SYKGDLFTVPVTGGTAKQLTT-NPAYDYNPVWSPDGSKIAFAS-DREGGINVWVMPSKGG 98

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISV-----------QKDEAMDIYSVDLQSNATE- 295
           +  +   +     +   F+ +    L S+              +   +Y V ++      
Sbjct: 99  QPQQITTSSHFKNVL-TFA-DNDHVLFSMADMPTRQSIIPSLGKFPQVYEVSVKGGRPRL 156

Query: 296 ---------------------------------------------------RLTNTLFIN 304
                                                              +LT+    +
Sbjct: 157 FSGLMMADININRKTGDVLYHDIKGSEDMYRKHHQSAICRDIWMLSKGKYTKLTDFAGED 216

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL---- 360
            +  ++ D     + S+++G   ++    +G   ++I++ K         +  G L    
Sbjct: 217 RTPVWTADGKGYYYLSEQDGTFNVWYRSLDGKQNQQITRHKTNPVRFLTAADNGTLCYGY 276

Query: 361 --IAFTKFSGEK-------------------------------------------FAIGV 375
               +T   G +                                             + V
Sbjct: 277 DGEIYTVRQGSQPQRVNINIVSDKTDRELIREVLTKGATEVVASPSGKEVAFVIHGEVYV 336

Query: 376 MKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              D    R + +   L+   ++SP GRSL ++ +++G     +Y   +  ++E      
Sbjct: 337 TATDYKTTRRITDTPELERNLSFSPDGRSLAYASERNGCW--NIYQTTIKNKDEKQFTYA 394

Query: 435 AYASD 439
              ++
Sbjct: 395 TDLTE 399



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 105/326 (32%), Gaps = 55/326 (16%)

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII--------- 140
           K+T+     R   W + G         + E      V +R  D K  +QI          
Sbjct: 208 KLTDFAGEDRTPVWTADGKGYY----YLSEQDGTFNVWYRSLDGKQNQQITRHKTNPVRF 263

Query: 141 --------------GKKFFSSPASW--RKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
                         G+ +     S   R   + +SD   + +  E     +  +  S S 
Sbjct: 264 LTAADNGTLCYGYDGEIYTVRQGSQPQRVNINIVSDKTDRELIREVLTKGATEVVASPSG 323

Query: 185 --VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             V+ +I   + V   D    R +T + +       FSP+ + +AYA+  +     +Y  
Sbjct: 324 KEVAFVIHGEVYVTATDYKTTRRITDTPELERNL-SFSPDGRSLAYASERNG-CWNIYQT 381

Query: 243 DTR----------IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             +           D   +++         PR+S + K       +     I  ++L + 
Sbjct: 382 TIKNKDEKQFTYATDLTEEQLTKQNHTSFYPRYSPDSKELAFFEDRG---TIRIINLATK 438

Query: 293 ATERLTNTLFI------NISASYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQ 343
               + +   +      +I   +SPDS  ++     +G      + ++ ++G  +     
Sbjct: 439 KIRTVMDGKDLFSYSDGDIDFEWSPDSRWLLATYYGDGGYHHDDIALIDASGKQKPYNLT 498

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGE 369
           +      +P W   G  + FT     
Sbjct: 499 NSSYYDMNPHWVLGGKAMLFTSNRRG 524



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 7/54 (12%)

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
           ++    SP G+++ FS K        L+++ + G   + L   PAY  +P W  
Sbjct: 26  MRFCAISPDGQTIAFSYK------GDLFTVPVTGGTAKQLTTNPAYDYNPVWSP 73


>gi|303235446|ref|ZP_07322060.1| dipeptidyl peptidase IV N-terminal domain protein [Prevotella
           disiens FB035-09AN]
 gi|302484361|gb|EFL47342.1| dipeptidyl peptidase IV N-terminal domain protein [Prevotella
           disiens FB035-09AN]
          Length = 1087

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 66/199 (33%), Gaps = 28/199 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK    S + D    I+SV +      +LT     +    +SPD   I F S RE
Sbjct: 30  AISPDGKTIAFSYKGD----IFSVPVNGGIARQLTTNPAYDAYPVWSPDGQNIAFSSSRE 85

Query: 324 GKEQLYVMQSNGSDQKRISQ-----------DKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           G   +Y+M  +G   KR++            D     F     P    I F    G    
Sbjct: 86  GSLDIYLMSKDGGTPKRLTTNSGSETPMAFKDNNHILFTTEVMPTAKSIYFAS--GIFPQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLYSIDL 423
              +  DGS+ R LV  + +   + +  G  L          F +         ++    
Sbjct: 144 TYEVTTDGSRPR-LVSPTTMCDVSINSKGEMLYHDSKGYEDNFRKHHRSPVTRDIWLYS- 201

Query: 424 NGRNETLINTPAYASDPQW 442
            G+   L +       P W
Sbjct: 202 EGKYTKLTDFNGEDRTPVW 220



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 96/266 (36%), Gaps = 37/266 (13%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K S+      G ++     +    L     SP+ + +A++     DI  V +        
Sbjct: 2   KKSILTAAILGLSVSAFADNTPLWLRYSAISPDGKTIAFSY--KGDIFSVPVN----GGI 55

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +++    +    P +S +G+    S  ++ ++DIY +       +RLT         ++
Sbjct: 56  ARQLTTNPAYDAYPVWSPDGQNIAFSSSREGSLDIYLMSKDGGTPKRLTTNSGSETPMAF 115

Query: 310 ------------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                        P +  I F S      Q Y + ++GS  + +S     +  D   + +
Sbjct: 116 KDNNHILFTTEVMPTAKSIYFAS--GIFPQTYEVTTDGSRPRLVS---PTTMCDVSINSK 170

Query: 358 GDLIAF-----------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           G+++                S     I +   +G   +L   +   + P W+ +G S  +
Sbjct: 171 GEMLYHDSKGYEDNFRKHHRSPVTRDIWLYS-EGKYTKLTDFNGEDRTPVWASNGTSYYY 229

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLIN 432
             ++DG     +Y  +L+G  +  + 
Sbjct: 230 LSEEDGTF--NVYKRNLDGSGKKQLT 253



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 55/296 (18%), Positives = 114/296 (38%), Gaps = 38/296 (12%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y  ++ E G FN     V +  + G  K  L    ++   +R+LT + +  L    +  +
Sbjct: 227 YYYLSEEDGTFN-----VYKRNLDGSGKKQLTFHKKN--PVRFLTAANNGTLC---YGYD 276

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +        +   + + ++  +ID+  +R           + S  GK     +  D   
Sbjct: 277 GEIYTLNEGKEPQKVNISIVTDQIDKKLERQVRSSGATEI-KLSPKGKEIAFVLHGD--- 332

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   L    T+++TNT     +  ++PD   IV+ S+R G  Q+Y  +     +K  +
Sbjct: 333 -VYVTSLDYKTTKQVTNTAEQERNIDFAPDGRGIVYSSERNGIWQIYETKIKNKAEKNFT 391

Query: 343 Q----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                      + + +   P +SP G  +AF +      A+ V+           + +++
Sbjct: 392 YSTDLVEERLTNTDQTSQMPQYSPDGKKVAFFENRA---ALKVIDLKSKAVTAATDGNDV 448

Query: 393 QAP-------TWSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            +        +WSP  R L+  +     G     +  ID+ G+ + +  T +  +D
Sbjct: 449 YSYSDGDIWFSWSPDSRWLLAPYMGN-AGWNNPDISLIDITGKKKPVNLTQSGYND 503



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 48/382 (12%), Positives = 105/382 (27%), Gaps = 132/382 (34%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  +  +  +G   R LT         P +SP+ Q +A+++  +   L +YLM ++  
Sbjct: 41  SYKGDIFSVPVNGGIARQLTT-NPAYDAYPVWSPDGQNIAFSSSREGS-LDIYLM-SKDG 97

Query: 248 RAPKRIGNFRSMILAPRF------------SSNGKRALISV---------QKDEAMDIYS 286
             PKR+           F                K    +            D +     
Sbjct: 98  GTPKRLTTNSGSETPMAFKDNNHILFTTEVMPTAKSIYFASGIFPQTYEVTTDGSRPRLV 157

Query: 287 ---------VDLQS-------------------------------NATERLTNTLFINIS 306
                    ++ +                                    +LT+    + +
Sbjct: 158 SPTTMCDVSINSKGEMLYHDSKGYEDNFRKHHRSPVTRDIWLYSEGKYTKLTDFNGEDRT 217

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL------ 360
             ++ + +   + S+ +G   +Y    +GS +K+++  K+        +  G L      
Sbjct: 218 PVWASNGTSYYYLSEEDGTFNVYKRNLDGSGKKQLTFHKKNPVRFLTAANNGTLCYGYDG 277

Query: 361 -----------------------------------------------IAFTKFSGEKFAI 373
                                                          IAF         +
Sbjct: 278 EIYTLNEGKEPQKVNISIVTDQIDKKLERQVRSSGATEIKLSPKGKEIAFVLHGD----V 333

Query: 374 GVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG----------DTGSKLYSID 422
            V   D    + +   +  +    ++P GR +++S +++G          +   K ++  
Sbjct: 334 YVTSLDYKTTKQVTNTAEQERNIDFAPDGRGIVYSSERNGIWQIYETKIKNKAEKNFTYS 393

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            +   E L NT   +  PQ+  
Sbjct: 394 TDLVEERLTNTDQTSQMPQYSP 415



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 47/123 (38%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + DQ    P++SP+ +KVA+        ++ +             + ++    +   +
Sbjct: 401 LTNTDQTSQMPQYSPDGKKVAFFENRAALKVIDLKSKAVTAATDGNDVYSYSDGDIWFSW 460

Query: 266 SSNGKRALISVQKD---EAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESD 321
           S + +  L     +      DI  +D+        LT + + +  A ++     ++F SD
Sbjct: 461 SPDSRWLLAPYMGNAGWNNPDISLIDITGKKKPVNLTQSGYNDTGAKWALGGKAMLFFSD 520

Query: 322 REG 324
           R G
Sbjct: 521 RAG 523



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 7/50 (14%)

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
             SP G+++ FS K        ++S+ +NG     + T PAY + P W  
Sbjct: 30  AISPDGKTIAFSYK------GDIFSVPVNGGIARQLTTNPAYDAYPVWSP 73


>gi|284032800|ref|YP_003382731.1| beta-lactamase [Kribbella flavida DSM 17836]
 gi|283812093|gb|ADB33932.1| beta-lactamase [Kribbella flavida DSM 17836]
          Length = 1117

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 80/215 (37%), Gaps = 50/215 (23%)

Query: 264 RFSSNGKRALISVQKDEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             S +G + +  ++  +A        ++ V        RLT     + + ++SPD +++ 
Sbjct: 20  ALSPDGNQVVYVLRTIDAAADRTEHALWRVPSAGGEARRLTRGTS-DRAPAWSPDGTKLA 78

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------------ 365
           F   ++G  QL+++ ++G + ++++     +   P WSP G+ IAF+             
Sbjct: 79  FLRAQDGPPQLWLLPADGGEPEQLTTLPLGA-GTPSWSPDGERIAFSSAVDIAAAADEDD 137

Query: 366 ----FSGE---------------------KFAIGVMKKDGSQERLLVE-DSNLQAPTWSP 399
                 G                      +  + V+     + R + E D +   P+WSP
Sbjct: 138 ETRERRGHAPIVTERLDYQADGAGLLRTIRQHLHVVDVASKKCRQVTEGDWHAGDPSWSP 197

Query: 400 SGRSLIFSRKKDGDTGSK----LYSIDLNGRNETL 430
             R L F      D   +     Y +D++    T 
Sbjct: 198 DSRKLAFGAGTAPDADLRPTAPAYLLDVSDEKATP 232



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 85/268 (31%), Gaps = 53/268 (19%)

Query: 218 RFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+  +V Y     +                    +R+    S   AP +S +G +  
Sbjct: 20  ALSPDGNQVVYVLRTIDAAADRTEHALWRVPSAGGEARRLTRGTS-DRAPAWSPDGTKLA 78

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES------------- 320
               +D    ++ +       E+LT       + S+SPD  +I F S             
Sbjct: 79  FLRAQDGPPQLWLLPADGGEPEQLTTLPLGAGTPSWSPDGERIAFSSAVDIAAAADEDDE 138

Query: 321 --DREG----------------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             +R G                      ++ L+V+       ++++ + +    DP WSP
Sbjct: 139 TRERRGHAPIVTERLDYQADGAGLLRTIRQHLHVVDVASKKCRQVT-EGDWHAGDPSWSP 197

Query: 357 QGDLIAFTKFSGEKFAIG----VMKKDGSQERLLVE----DSNLQAPT-WSPSGRSLIFS 407
               +AF   +     +         D S E+   +       L  P  W+    +LI  
Sbjct: 198 DSRKLAFGAGTAPDADLRPTAPAYLLDVSDEKATPQLAGLTEGLAGPILWTADSAALIVV 257

Query: 408 RKKDGDTGSK-LYSIDLNGRNETLINTP 434
              DG  G   L  + L+G   + +  P
Sbjct: 258 GTSDGPVGHAGLLRLPLDGGEVSNLAAP 285



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 72/229 (31%), Gaps = 21/229 (9%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-----ATYDDEDILRVYLM 242
            I+  L V+D      R +T   D    +P +SP+ +K+A+        D       YL+
Sbjct: 165 TIRQHLHVVDVASKKCRQVTEG-DWHAGDPSWSPDSRKLAFGAGTAPDADLRPTAPAYLL 223

Query: 243 DTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDE---AMDIYSVDLQSNATERLT 298
           D   ++A  ++      +  P  ++++    ++    D       +  + L       L 
Sbjct: 224 DVSDEKATPQLAGLTEGLAGPILWTADSAALIVVGTSDGPVGHAGLLRLPLDGGEVSNLA 283

Query: 299 NTLFINISA----------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             L  N+                D   ++F     G   LY +  +G   + +       
Sbjct: 284 APLDRNVMPGGPGYPGALPVLVDDGGTVLFCVRDRGCTHLYAVPVDGGAPRHVL-GGPGD 342

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
               +    G  +     +     +  +     + + L E S   A  +
Sbjct: 343 IVSGLSVANGQAVVVLTTATSYGEVVKVDLSSGEAQTLTEHSADVAEVF 391



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 10/63 (15%), Positives = 19/63 (30%), Gaps = 4/63 (6%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           L E +  +    SP G  +++  +        T   L+ +   G     +        P 
Sbjct: 10  LTEFAVPEQVALSPDGNQVVYVLRTIDAAADRTEHALWRVPSAGGEARRLTRGTSDRAPA 69

Query: 442 WVG 444
           W  
Sbjct: 70  WSP 72


>gi|149276287|ref|ZP_01882431.1| WD40-like repeat/amidohydrolase domain protein [Pedobacter sp.
           BAL39]
 gi|149232807|gb|EDM38182.1| WD40-like repeat/amidohydrolase domain protein [Pedobacter sp.
           BAL39]
          Length = 1080

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 79/210 (37%), Gaps = 25/210 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I       +    S +GK     +  D    IY + +       L+  +   +   +SP+
Sbjct: 39  IDTEEGTWMNLDVSPDGKDITFDLLGD----IYVMPIIGGTATLLSGGIAWEVQPRFSPN 94

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL-IAFTKFSGEKF 371
              I + SD+ G + +++M  +GS +++++++      +  W P  +  IA   ++G + 
Sbjct: 95  GKYISYTSDKTGGDNIWIMNRDGSAKRQVTKETFRLLNNATWMPNSEYLIARKHYTGTRS 154

Query: 372 ----AIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRK--------KDGDTG 415
                + +    G +   L     +  +   P  SPSGR L FS             D  
Sbjct: 155 LGAGEMWMYSIYGGEGVQLTKRKNDQQDAGEPNVSPSGRYLYFSEDMAPGPNFEYSKDPN 214

Query: 416 SKLYSID----LNGRNETLINTPAYASDPQ 441
             +Y+I       G+   LI     A  PQ
Sbjct: 215 GLIYAIRRLDMTTGKLTDLIAQAGGAVRPQ 244



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 93/231 (40%), Gaps = 30/231 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + + +    D     +Y+M   I      +    +  + PRFS NGK    +  K 
Sbjct: 52  SPDGKDITFDLLGD-----IYVMPI-IGGTATLLSGGIAWEVQPRFSPNGKYISYTSDKT 105

Query: 280 EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV----FESDRE-GKEQLYVMQS 333
              +I+ ++   +A  ++T   F +  +A++ P+S  ++    +   R  G  ++++   
Sbjct: 106 GGDNIWIMNRDGSAKRQVTKETFRLLNNATWMPNSEYLIARKHYTGTRSLGAGEMWMYSI 165

Query: 334 NGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKF-------------SGEKFAIGVMKK 378
            G +  ++++ K       +P  SP G  + F++              +G  +AI  +  
Sbjct: 166 YGGEGVQLTKRKNDQQDAGEPNVSPSGRYLYFSEDMAPGPNFEYSKDPNGLIYAIRRLDM 225

Query: 379 DGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              +   L+ +      P  SP G+ + + ++      S LY  +L    E
Sbjct: 226 TTGKLTDLIAQAGGAVRPQVSPDGKFMAYVKRV--RLKSVLYIQNLQTAEE 274



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 73/198 (36%), Gaps = 20/198 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + V +      +           +  P+R+ N       P+ SS+GK  + +   D
Sbjct: 364 SADGKMVVF------NAAGYLYKKELPNGIPERVTNSNEFEFEPKISSDGKYVIYATWND 417

Query: 280 E-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---------SDREGKEQLY 329
           +    I   DL+S  T  LT+      S SYS    +IVF                  +Y
Sbjct: 418 DLKGAIKRADLKSGKTTTLTDEKGFYYSPSYSSKGDKIVFRKGVGNEVLGYSYGRGTGIY 477

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +M +NG  +  +S +       P ++     I F  +   K A   +  +G+ ER     
Sbjct: 478 LMSANGGAKTLVSDNG----IRPQFNADDTRIYFQGYDNGKKAFKSIDLNGANERTHYTS 533

Query: 390 SNLQAPTWSPSGRSLIFS 407
           +       SP G+ + F+
Sbjct: 534 TYANQFAPSPDGKWMAFT 551



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 89/274 (32%), Gaps = 34/274 (12%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E+G + +  +      ++  +   + VM   G     L         +PRFSPN + ++
Sbjct: 41  TEEGTWMNLDVSPDGKDITFDLLGDIYVMPIIGGTA-TLLSGGIAWEVQPRFSPNGKYIS 99

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKD-EAM 282
           Y + D      +++M+       +       ++    +  N +  +     +  +   A 
Sbjct: 100 YTS-DKTGGDNIWIMNRDGSAKRQVTKETFRLLNNATWMPNSEYLIARKHYTGTRSLGAG 158

Query: 283 DIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKEQL-YVMQSNG--S 336
           +++   +      +LT   N        + SP    + F  D        Y    NG   
Sbjct: 159 EMWMYSIYGGEGVQLTKRKNDQQDAGEPNVSPSGRYLYFSEDMAPGPNFEYSKDPNGLIY 218

Query: 337 DQKRISQDKE---------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
             +R+                   P  SP G  +A+ K    K  + +     ++E  + 
Sbjct: 219 AIRRLDMTTGKLTDLIAQAGGAVRPQVSPDGKFMAYVKRVRLKSVLYIQNLQTAEEWPVY 278

Query: 388 ED------------SNLQAPTWSPSGRSLIFSRK 409
           E+                   W+P G++L+F  +
Sbjct: 279 EELSHDQQETWAIFGVYPNYAWTPDGKALVFYAR 312



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 92/270 (34%), Gaps = 64/270 (23%)

Query: 214 LFEPRFSPNQQKVAYA-TYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILA-----P--R 264
              P+ SP+ + +AY      + +L +  + T       + + + +    A     P   
Sbjct: 240 AVRPQVSPDGKFMAYVKRVRLKSVLYIQNLQTAEEWPVYEELSHDQQETWAIFGVYPNYA 299

Query: 265 FSSNGKRALI------------SVQKDEAMDIYSVDLQS------------------NAT 294
           ++ +GK  +             S+Q  +    + +  Q+                     
Sbjct: 300 WTPDGKALVFYARGKIKRVELNSLQVTDIP-FHVISTQTVQEALHFTHQVFSNEFNAKMI 358

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +LT           S D   +VF +       LY  +      +R++   E   F+P  
Sbjct: 359 RQLTT----------SADGKMVVFNA----AGYLYKKELPNGIPERVTNSNE-FEFEPKI 403

Query: 355 SPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG 412
           S  G  + +  ++ + K AI        +   L ++     +P++S  G  ++F +    
Sbjct: 404 SSDGKYVIYATWNDDLKGAIKRADLKSGKTTTLTDEKGFYYSPSYSSKGDKIVFRKGVGN 463

Query: 413 D-------TGSKLYSIDLNGRNETLINTPA 435
           +        G+ +Y +  NG  +TL++   
Sbjct: 464 EVLGYSYGRGTGIYLMSANGGAKTLVSDNG 493



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 96/311 (30%), Gaps = 49/311 (15%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD--QILFEPRFSPNQQKVAYATYDDE 234
           I     +    +    + +    G     LT  ++  Q   EP  SP+ + + ++     
Sbjct: 144 IARKHYTGTRSLGAGEMWMYSIYGGEGVQLTKRKNDQQDAGEPNVSPSGRYLYFSEDMAP 203

Query: 235 DI------------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                           +  +D    +    I      +  P+ S +GK      +     
Sbjct: 204 GPNFEYSKDPNGLIYAIRRLDMTTGKLTDLIAQAGGAVR-PQVSPDGKFMAYVKRVRLKS 262

Query: 283 DIYSVDLQSNATERLTNTLFIN---------ISAS--YSPDSSQIVFESD----REGKEQ 327
            +Y  +LQ+     +   L  +         +  +  ++PD   +VF +     R     
Sbjct: 263 VLYIQNLQTAEEWPVYEELSHDQQETWAIFGVYPNYAWTPDGKALVFYARGKIKRVELNS 322

Query: 328 LYVMQSNG--------SDQKRISQDKEASYFDPVW------SPQGDLIAFTKFSGEKFAI 373
           L V              +    +    ++ F+         S  G ++ F   +   +  
Sbjct: 323 LQVTDIPFHVISTQTVQEALHFTHQVFSNEFNAKMIRQLTTSADGKMVVF---NAAGYLY 379

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
                +G  ER+   +     P  S  G+ +I++   D D    +   DL +G+  TL +
Sbjct: 380 KKELPNGIPERVTNSNEFEFEPKISSDGKYVIYATWND-DLKGAIKRADLKSGKTTTLTD 438

Query: 433 TPAYASDPQWV 443
              +   P + 
Sbjct: 439 EKGFYYSPSYS 449



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 62/204 (30%), Gaps = 28/204 (13%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY--------AT 230
           +V  +  +  +K ++   D        LT  +    + P +S    K+ +          
Sbjct: 409 YVIYATWNDDLKGAIKRADLKSGKTTTLTDEK-GFYYSPSYSSKGDKIVFRKGVGNEVLG 467

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           Y       +YLM            N     + P+F+++  R       +      S+DL 
Sbjct: 468 YSYGRGTGIYLMSANGGAKTLVSDNG----IRPQFNADDTRIYFQGYDNGKKAFKSIDLN 523

Query: 291 S-NATERLTNTLFINISASYSPDSSQIVFE---------SDREGKEQLYVMQSNGSDQKR 340
             N     T+T     +   SPD   + F            R G  Q     +      R
Sbjct: 524 GANERTHYTSTYANQFAP--SPDGKWMAFTELFNVYLTPMVRTGAAQELSSGNKSIPLTR 581

Query: 341 ISQDKEASYFDPVWSPQGDLIAFT 364
           +++D         WS     + +T
Sbjct: 582 LTKDAGTYM---HWSSDSQRLFWT 602


>gi|37521272|ref|NP_924649.1| peptidase [Gloeobacter violaceus PCC 7421]
 gi|35212269|dbj|BAC89644.1| gll1703 [Gloeobacter violaceus PCC 7421]
          Length = 730

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 110/334 (32%), Gaps = 86/334 (25%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+++V  SV       +  +     A       S       PR+SP+ + +A+    ++D
Sbjct: 60  RVVYVRVSVDEKKDTYTTSLWQVATATGEARPLSTGARDSSPRWSPDGKTLAFLRSAEKD 119

Query: 236 ----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------------- 277
                 +++L+        + + +         +S + +R   +                
Sbjct: 120 GKSEPPQIHLLSLD-GGEARALTDLPKGAGGISWSPDSRRIAFTSSTKNEDIAEKQKKNE 178

Query: 278 --------------------------KDEAMDIYSVDLQS------NATERLTNTLFINI 305
                                     +D    I+ VDL +       A +++T   F   
Sbjct: 179 DDKPKKSDVRVIKRAIYRFNGAGYLEEDRPGHIWIVDLPTDPAAPPPAAKQITKGEFEED 238

Query: 306 SASYSPDSSQIVFESDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           + ++SPD +++ F SDR            +Y + + G +  R+  + +        SP G
Sbjct: 239 APAWSPDGTRLYFTSDRTREAYYEPVDTDIYTVSAGGGEISRVV-NIDGPIGTFALSPDG 297

Query: 359 DLIAFT-------KFSGEKFAIGVMKKD-GSQERLLVEDSNLQA---------------- 394
             IAF        ++S  +  + V     G+  + L  D +  A                
Sbjct: 298 RRIAFVGFVNAKPEYSYTQPDLFVADLSPGAAPKNLTADYDFDAGDGIGGDQRAPRAAAD 357

Query: 395 --PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             P WS  GRS++ +  + G    K +    +GR
Sbjct: 358 YRPVWSGDGRSIVIATAERGRANLKRFDA-ADGR 390



 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 55/282 (19%), Positives = 89/282 (31%), Gaps = 72/282 (25%)

Query: 212 QILFEPRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             + +PR SP+  +V Y      + +D     L          R  +  +   +PR+S +
Sbjct: 47  NWVADPRLSPDGARVVYVRVSVDEKKDTYTTSLWQVATATGEARPLSTGARDSSPRWSPD 106

Query: 269 GKRALI--SVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--- 320
           GK      S +KD       I+ + L       LT+        S+SPDS +I F S   
Sbjct: 107 GKTLAFLRSAEKDGKSEPPQIHLLSLDGGEARALTDLPKGAGGISWSPDSRRIAFTSSTK 166

Query: 321 ---------------------------------------DREGKEQLYVMQSNG------ 335
                                                  DR G   ++++          
Sbjct: 167 NEDIAEKQKKNEDDKPKKSDVRVIKRAIYRFNGAGYLEEDRPG--HIWIVDLPTDPAAPP 224

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-------AIGVMKKDGSQERLLVE 388
              K+I++  E     P WSP G  + FT     +         I  +   G +   +V 
Sbjct: 225 PAAKQITK-GEFEEDAPAWSPDGTRLYFTSDRTREAYYEPVDTDIYTVSAGGGEISRVVN 283

Query: 389 -DSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLN 424
            D  +     SP GR + F    +       T   L+  DL+
Sbjct: 284 IDGPIGTFALSPDGRRIAFVGFVNAKPEYSYTQPDLFVADLS 325



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 68/233 (29%), Gaps = 50/233 (21%)

Query: 217 PRFSPNQQKVAYATYDDEDILR------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           P +SP+  ++ + +    +         +Y +        + + N    I     S +G+
Sbjct: 240 PAWSPDGTRLYFTSDRTREAYYEPVDTDIYTVSAGGGEISRVV-NIDGPIGTFALSPDGR 298

Query: 271 RALISVQKD-------EAMDIYSVDLQ-SNATERLTNTL-----------------FINI 305
           R       +          D++  DL    A + LT                      + 
Sbjct: 299 RIAFVGFVNAKPEYSYTQPDLFVADLSPGAAPKNLTADYDFDAGDGIGGDQRAPRAAADY 358

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-FT 364
              +S D   IV  +   G+  L    +       ++   +    +   +P G   A   
Sbjct: 359 RPVWSGDGRSIVIATAERGRANLKRFDAADGRASDVTT-GDHEIAEYTATPDGSRFAGVI 417

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN-------------LQAPTWSPSGRSL 404
               E   I ++   G+  R L   +              +  P++   G+++
Sbjct: 418 SRPTEVGDIYLLSL-GASPRRLTRGNAPLFDTLQTSAPEEINYPSF--DGQTI 467



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 10/110 (9%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQAPTWS 398
           K     DP  SP G  + + + S ++        +  +     + R L   +   +P WS
Sbjct: 45  KFNWVADPRLSPDGARVVYVRVSVDEKKDTYTTSLWQVATATGEARPLSTGARDSSPRWS 104

Query: 399 PSGRSLIFSRKKDGDTGS---KLYSIDLNGRNET-LINTPAYASDPQWVG 444
           P G++L F R  + D  S   +++ + L+G     L + P  A    W  
Sbjct: 105 PDGKTLAFLRSAEKDGKSEPPQIHLLSLDGGEARALTDLPKGAGGISWSP 154



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 79/233 (33%), Gaps = 30/233 (12%)

Query: 175 SRILFVSESVVSGIIK---NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           +R+ F S+       +     +  +   G  I  +    D  +     SP+ +++A+  +
Sbjct: 247 TRLYFTSDRTREAYYEPVDTDIYTVSAGGGEISRVVN-IDGPIGTFALSPDGRRIAFVGF 305

Query: 232 DDEDILRVYLM------DTRIDRAPKRIG---------NFRSMILAPR--------FSSN 268
            +      Y        D     APK +                 APR        +S +
Sbjct: 306 VNAKPEYSYTQPDLFVADLSPGAAPKNLTADYDFDAGDGIGGDQRAPRAAADYRPVWSGD 365

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-FESDREGKEQ 327
           G+  +I+  +    ++   D        +T         + +PD S+     S       
Sbjct: 366 GRSIVIATAERGRANLKRFDAADGRASDVTTGDHEIAEYTATPDGSRFAGVISRPTEVGD 425

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +Y++   G+  +R+++   A  FD + +   + I +  F G+     + K  G
Sbjct: 426 IYLLSL-GASPRRLTR-GNAPLFDTLQTSAPEEINYPSFDGQTIQGWLFKPPG 476


>gi|227537270|ref|ZP_03967319.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227242874|gb|EEI92889.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 1025

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 89/222 (40%), Gaps = 29/222 (13%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNAT-----ERLTN-----TLF 302
           GN   M ++P  S +GK      +KD  ++D++  D  +         RLTN       F
Sbjct: 276 GNSGRMNVSPAISPDGKYVAFLSEKDMFSIDLFLADAHTGKVIRKLGSRLTNKDIDEFSF 335

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLI 361
           +  + ++SPDS +  F     GK +L  +         +    + + F +  W+  GD +
Sbjct: 336 LESAGTFSPDSRKFAFSVFSAGKNKLMTVDVATGKTLSVEAMGDITEFTNITWAADGDHV 395

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSR--------KKDG 412
           AF+        I +      +   L  D  +   P++S  G+S++FS          +  
Sbjct: 396 AFSGLKNGHSDIYIYNLKTKKLDQLTNDVYSDFQPSFSRDGKSIVFSTDRVALASDNRSV 455

Query: 413 DTGSKLYSIDLNGRNETLIN--------TPAYASDPQWVGFM 446
           D    L  +D+  +N   ++         P ++S+ + + F+
Sbjct: 456 DIPMNLAIVDIRTKNIQNLDIFPGANNLNPHFSSNGEQIYFL 497



 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 89/238 (37%), Gaps = 24/238 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---------FR 257
           T +  ++   P  SP+ + VA+ +  D   + ++L D    +  +++G+         F 
Sbjct: 275 TGNSGRMNVSPAISPDGKYVAFLSEKDMFSIDLFLADAHTGKVIRKLGSRLTNKDIDEFS 334

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQ 315
            +  A  FS + ++   SV       + +VD+ +  T  +     I    + +++ D   
Sbjct: 335 FLESAGTFSPDSRKFAFSVFSAGKNKLMTVDVATGKTLSVEAMGDITEFTNITWAADGDH 394

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------K 365
           + F   + G   +Y+         +++ D   S F P +S  G  I F+          +
Sbjct: 395 VAFSGLKNGHSDIYIYNLKTKKLDQLTND-VYSDFQPSFSRDGKSIVFSTDRVALASDNR 453

Query: 366 FSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                  + ++       + L     +N   P +S +G  + F    DG      Y++
Sbjct: 454 SVDIPMNLAIVDIRTKNIQNLDIFPGANNLNPHFSSNGEQIYFLSNGDGYRNMYRYTV 511



 Score = 93.5 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 73/185 (39%), Gaps = 18/185 (9%)

Query: 218 RFSPNQQKVAYATYDDED----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            FSP+ +K A++ +         + V    T    A   I  F ++     ++++G    
Sbjct: 341 TFSPDSRKFAFSVFSAGKNKLMTVDVATGKTLSVEAMGDITEFTNIT----WAADGDHVA 396

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----------E 323
            S  K+   DIY  +L++   ++LTN ++ +   S+S D   IVF +DR          +
Sbjct: 397 FSGLKNGHSDIYIYNLKTKKLDQLTNDVYSDFQPSFSRDGKSIVFSTDRVALASDNRSVD 456

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L ++     + + +     A+  +P +S  G+ I F         +       +Q 
Sbjct: 457 IPMNLAIVDIRTKNIQNLDIFPGANNLNPHFSSNGEQIYFLSNGDGYRNMYRYTVASAQL 516

Query: 384 RLLVE 388
             L +
Sbjct: 517 EKLTD 521



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 92/271 (33%), Gaps = 32/271 (11%)

Query: 122 DRLRVEFRLWDVKDRKQI--IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           D   ++  L D    K I  +G +  +             D    S     G F+     
Sbjct: 301 DMFSIDLFLADAHTGKVIRKLGSRLTNK------------DIDEFSFLESAGTFSPDSRK 348

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            + SV S      + V    G  +               ++ +   VA++   +     +
Sbjct: 349 FAFSVFSAGKNKLMTVDVATGKTLSVEAMGDITEFTNITWAADGDHVAFSGLKNGHS-DI 407

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------DEAMDIYSVDL 289
           Y+ + +  +   ++ N       P FS +GK  + S  +          D  M++  VD+
Sbjct: 408 YIYNLKT-KKLDQLTNDVYSDFQPSFSRDGKSIVFSTDRVALASDNRSVDIPMNLAIVDI 466

Query: 290 QSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           ++   + L       N++  +S +  QI F S+ +G   +Y      +  ++++      
Sbjct: 467 RTKNIQNLDIFPGANNLNPHFSSNGEQIYFLSNGDGYRNMYRYTVASAQLEKLTDYFTGI 526

Query: 349 YFDPVWSPQG-----DLIAFTKFSGEKFAIG 374
                +SP       D I ++ F    +++ 
Sbjct: 527 SGITEYSPAMSISATDEIVYSYFKNNAYSVY 557


>gi|326532988|dbj|BAJ89339.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 654

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 65/370 (17%), Positives = 118/370 (31%), Gaps = 71/370 (19%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              L+D++  +      F +  +      H      Y       G       F    V  
Sbjct: 277 HIELFDLETEQ------FTAVTSLLNPELHH-----YNPFFSPSGGRLGYHRFRGAGVQG 325

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
             +   L  +    ++IR L          P FSP+ +  A      +      +   R 
Sbjct: 326 DSMIPYLQPVRSPVSSIRMLRVHGS----FPSFSPDAKHFALNGDFFKSPG---VTILRA 378

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQK--------------------DEAMDIYS 286
           D + + +   +  +    +S      + +                       +   D   
Sbjct: 379 DGSKRWVLAKQPNLFYTSWSPTESGVVFTSIGPIFETPKATVRVARIEFDPSELTDDRGD 438

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--KRISQD 344
           VD+      R       +   + SP    +VF S R G + LY++ +   ++  +R++ D
Sbjct: 439 VDVAVKELTR--PEAGNDAFPAVSPCGRWVVFRSGRSGHKNLYIVDAARGEETIRRVT-D 495

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLL----------VED 389
            E     P WSP G+LIAF+    E      F+I +++ DG+  R +           + 
Sbjct: 496 GEWIDTMPSWSPDGELIAFSSNRHEPANAAVFSIYLVRPDGTGLRRVHVAGPAGSAEADK 555

Query: 390 SNLQAPTWSPSGRSLIFSRKKDG------------DTGSKLYSIDLNGRNETLINTPAY- 436
             +    +SP G+ L+F+    G                 LY   L+G     +   AY 
Sbjct: 556 ERINHVCFSPDGQWLLFTANLGGVMAEPISGPNQFQPYGDLYVCRLDGSGVLRLTCNAYE 615

Query: 437 ASDPQWVGFM 446
              P W   +
Sbjct: 616 NGTPTWGPAL 625



 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 104/312 (33%), Gaps = 46/312 (14%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD---- 232
           I   +           L  ++ +         + +   + P FSP+  ++ Y  +     
Sbjct: 264 IAVATRRKGLAKRHIELFDLETEQFTAVTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGV 323

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             D +  YL   R   +  R+         P FS + K   ++    ++  +  +    +
Sbjct: 324 QGDSMIPYLQPVRSPVSSIRMLRVHG--SFPSFSPDAKHFALNGDFFKSPGVTILRADGS 381

Query: 293 ATERLTNTLFINISASYSPDSSQIVFES------DREGKEQLYVMQSNGSD--------- 337
               L     +  + S+SP  S +VF S        +   ++  ++ + S+         
Sbjct: 382 KRWVLAKQPNLFYT-SWSPTESGVVFTSIGPIFETPKATVRVARIEFDPSELTDDRGDVD 440

Query: 338 --QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQ 393
              K +++ +  +   P  SP G  + F         + ++     +E  R + +   + 
Sbjct: 441 VAVKELTRPEAGNDAFPAVSPCGRWVVFRSGRSGHKNLYIVDAARGEETIRRVTDGEWID 500

Query: 394 -APTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPA-------------- 435
             P+WSP G  + FS  +     +    +Y +  +G     ++                 
Sbjct: 501 TMPSWSPDGELIAFSSNRHEPANAAVFSIYLVRPDGTGLRRVHVAGPAGSAEADKERINH 560

Query: 436 --YASDPQWVGF 445
             ++ D QW+ F
Sbjct: 561 VCFSPDGQWLLF 572



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 61/185 (32%), Gaps = 18/185 (9%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD-SSQIVFESDREGKEQLYVM 331
           + SV   +  +  SV     A  R T+ + +N +A ++ D   ++ F S+R G   L++ 
Sbjct: 25  VFSVAVPQTPE--SVSAAGLAERRHTDGVSVNFNAQFADDVGEEVAFVSERTGSAGLFLC 82

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-----GVMKKDGSQE--- 383
           +        +    E S F    + +G  + F     +  A       V   +   E   
Sbjct: 83  RPESERAVPL-PVVEGSLFHDRPAVRGGRLYFVSSHEKPAAWFRSWAAVYATELGSEETV 141

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL------YSIDLNGRNETLINTPAYA 437
           R+  +     +P  S SG  L  +   +              ++         +   A  
Sbjct: 142 RVTPQGVADMSPAVSTSGELLAVASYGERPWAFDFHELETEVAVFRAADPARRVVVAARG 201

Query: 438 SDPQW 442
             P W
Sbjct: 202 GWPTW 206


>gi|271967011|ref|YP_003341207.1| peptidase S9 prolyl oligopeptidase [Streptosporangium roseum DSM
           43021]
 gi|270510186|gb|ACZ88464.1| peptidase S9 prolyl oligopeptidase [Streptosporangium roseum DSM
           43021]
          Length = 642

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 75/215 (34%), Gaps = 37/215 (17%)

Query: 263 PRFSSNGKRALISV-----QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           PR    G      V     + DE      +        RLT     + +  +SPD   + 
Sbjct: 18  PRLRPGGSDVAYVVATTDRESDENRSEIWLAAPGAEPRRLTGGP-RDSAPRWSPDGHSLA 76

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------ 371
           F    +G+ Q++++  +G + + ++     +    VWSP G  IA+    G+        
Sbjct: 77  FLRPVDGRAQIHLLPMDGGEPRVLTAAPLGA-GAAVWSPDGTGIAYGAPHGDPDPHAPVV 135

Query: 372 -------------------AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR--- 408
                               + V+     Q R +   D +   P+WSP GR L F+    
Sbjct: 136 ADRLEYKADGVGLLRGLTTHLSVVDVATGQTRQITSGDFHAGEPSWSPDGRKLAFAASME 195

Query: 409 -KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             +D      +YS+D++G    L+          W
Sbjct: 196 PDRDLAVTGAVYSVDVSGGEPELLTGAGVICTDAW 230



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 83/252 (32%), Gaps = 40/252 (15%)

Query: 210 RDQILFEPRFSPNQQKVAYA---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           R  +  +PR  P    VAY    T  + D  R  +        P+R+        APR+S
Sbjct: 11  RIAVPEDPRLRPGGSDVAYVVATTDRESDENRSEIWLAAPGAEPRRLTGGPR-DSAPRWS 69

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----- 321
            +G         D    I+ + +       LT       +A +SPD + I + +      
Sbjct: 70  PDGHSLAFLRPVDGRAQIHLLPMDGGEPRVLTAAPLGAGAAVWSPDGTGIAYGAPHGDPD 129

Query: 322 --------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                               R     L V+       ++I+     +  +P WSP G  +
Sbjct: 130 PHAPVVADRLEYKADGVGLLRGLTTHLSVVDVATGQTRQITSGDFHA-GEPSWSPDGRKL 188

Query: 362 AFTKFSGEKFAIGV------MKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSRKKDGD 413
           AF         + V      +   G +  LL     +    W   GR L+  F+    G 
Sbjct: 189 AFAASMEPDRDLAVTGAVYSVDVSGGEPELLTGAGVICTDAWWLGGRLLVAGFAGDPVGH 248

Query: 414 TGSKLYSIDLNG 425
              +L+S+  +G
Sbjct: 249 --IRLFSLGSDG 258



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 61/170 (35%), Gaps = 34/170 (20%)

Query: 306 SASYSPDSSQIVF---ESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                P  S + +    +DRE    + +++ + + G++ +R++         P WSP G 
Sbjct: 17  DPRLRPGGSDVAYVVATTDRESDENRSEIW-LAAPGAEPRRLTGGPR--DSAPRWSPDGH 73

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGD----- 413
            +AF +    +  I ++  DG + R+L        A  WSP G  + +            
Sbjct: 74  SLAFLRPVDGRAQIHLLPMDGGEPRVLTAAPLGAGAAVWSPDGTGIAYGAPHGDPDPHAP 133

Query: 414 ------------------TGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                               + L  +D+  G+   + +   +A +P W  
Sbjct: 134 VVADRLEYKADGVGLLRGLTTHLSVVDVATGQTRQITSGDFHAGEPSWSP 183



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 63/189 (33%), Gaps = 49/189 (25%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V+D      R +T S D    EP +SP+ +K+A+A   + D                 
Sbjct: 156 LSVVDVATGQTRQIT-SGDFHAGEPSWSPDGRKLAFAASMEPD----------------- 197

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                            +   ++        +YSVD+     E LT    I   A +   
Sbjct: 198 -----------------RDLAVTGA------VYSVDVSGGEPELLTGAGVICTDAWWL-G 233

Query: 313 SSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKE---ASYFDPVWSPQ--GDLIAFTK 365
              +V  F  D  G  +L+ + S+G  +     D+     +   P  +PQ  GD + F  
Sbjct: 234 GRLLVAGFAGDPVGHIRLFSLGSDGLVEVETGLDRNVMVGASGYPGAAPQLAGDDLIFCA 293

Query: 366 FSGEKFAIG 374
                  + 
Sbjct: 294 RDRGLTHLY 302


>gi|109898138|ref|YP_661393.1| peptidase S9, prolyl oligopeptidase active site region
           [Pseudoalteromonas atlantica T6c]
 gi|109700419|gb|ABG40339.1| peptidase S9, prolyl oligopeptidase active site region
           [Pseudoalteromonas atlantica T6c]
          Length = 692

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 88/270 (32%), Gaps = 21/270 (7%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           + FV   +     K    +   D  N+     +     F P  SP++ K+AY +      
Sbjct: 56  VYFVRNYMDIQNDKKRGNIWKVDKNNVMTPVTNGLHADFSPTLSPDESKLAYISTASGSA 115

Query: 237 -LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT- 294
            + +  ++T        +    S +    +S +GK    S           V+L      
Sbjct: 116 QIHIKWLNTGQTGQMTHLTGSPSNL---SWSPDGKMLAFSQFVKGTPKSP-VNLSGKPEG 171

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +  ++        Y  D +  +      G  Q++V+ ++G   ++++Q +        W
Sbjct: 172 AKWADSAIFIDDLFYRADGAGYI----PAGNNQIFVLSADGGTPRQLTQGEFNHGGSISW 227

Query: 355 SPQGDLIAFTKFSG-------EKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIF 406
           S     I F+               +  +     +   L +      +P  SP G+ + +
Sbjct: 228 SSDSKAIVFSANRHPDSDLELTDDNVYKVDVASGEMLQLTDRIGPDNSPLVSPDGKLIAY 287

Query: 407 SRK---KDGDTGSKLYSIDLNGRNETLINT 433
                       ++LY +D NG     + +
Sbjct: 288 LGYDEKYTNYENTQLYIMDANGGVSRSLTS 317



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 79/257 (30%), Gaps = 56/257 (21%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S++ ++S +  S  I          G   +    +         +SP+ + +A++ +   
Sbjct: 103 SKLAYISTASGSAQIHIK---WLNTGQTGQMTHLTGSPSNL--SWSPDGKMLAFSQFVKG 157

Query: 235 DIL---------------------------------------RVYLMDTRIDRAPKRIGN 255
                                                     +++++        +    
Sbjct: 158 TPKSPVNLSGKPEGAKWADSAIFIDDLFYRADGAGYIPAGNNQIFVLSADGGTPRQLTQG 217

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDI-------YSVDLQSNATERLTNTLFINISAS 308
             +   +  +SS+ K  + S  +    D+       Y VD+ S    +LT+ +  + S  
Sbjct: 218 EFNHGGSISWSSDSKAIVFSANRHPDSDLELTDDNVYKVDVASGEMLQLTDRIGPDNSPL 277

Query: 309 YSPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            SPD   I +    E        QLY+M +NG   + ++ + + S     W+     +  
Sbjct: 278 VSPDGKLIAYLGYDEKYTNYENTQLYIMDANGGVSRSLTSEFDRSVGSIQWASDSKGVYL 337

Query: 364 TKFSGEKFAIGVMKKDG 380
           +     +  +      G
Sbjct: 338 SYDDSGETYVAYQPLQG 354



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 74/220 (33%), Gaps = 23/220 (10%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL------RVYL 241
              N + V+  DG   R LT           +S + + + ++     D         VY 
Sbjct: 196 AGNNQIFVLSADGGTPRQLTQGEFNHGGSISWSSDSKAIVFSANRHPDSDLELTDDNVYK 255

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEAMDIYSVDLQSNATER 296
           +D       + + +      +P  S +GK              E   +Y +D     +  
Sbjct: 256 VDVASGEMLQ-LTDRIGPDNSPLVSPDGKLIAYLGYDEKYTNYENTQLYIMDANGGVSRS 314

Query: 297 LTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNG------SDQKRISQDKEASY 349
           LT+    ++ S  ++ DS  +    D  G+  +      G           ++  +  S 
Sbjct: 315 LTSEFDRSVGSIQWASDSKGVYLSYDDSGETYVAYQPLQGDRKIVADKVGGLAFGRPYSG 374

Query: 350 FDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVE 388
            +   +  G  +AFT  + ++   I +  K G +  LL +
Sbjct: 375 GEFDVANNGT-VAFTYSNPQRPADIAI--KKGDKATLLTQ 411


>gi|227539297|ref|ZP_03969346.1| tricorn family protease [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240979|gb|EEI90994.1| tricorn family protease [Sphingobacterium spiritivorum ATCC 33300]
          Length = 1056

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 87/247 (35%), Gaps = 22/247 (8%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            S+      P  SP+ Q + ++   D D+ +V            R+       +APR S 
Sbjct: 22  QSQASFFSYPTLSPDGQTIVFSY--DGDLWKV----AADGGLALRLTAMSGTEIAPRISP 75

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +GK    S  ++  MD+Y + L+     +LT     +   S+S DS  I F S R  +  
Sbjct: 76  DGKWLAFSSNQNGNMDVYIMPLEGGDIRQLTYHDAGDEVDSWSWDSKSIYFTSSRYNRFS 135

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGE-----KFAIGV 375
            Y +  NG   +R+      +  + V +P G+L+        F              I  
Sbjct: 136 SYKVAVNGGTAERMFPHYFNTIHNVVETPSGELLFNDSWESNFASNRKRYKGAFNPDILS 195

Query: 376 MKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                 Q +   +       P+     +  IF    + +    LYS  +NG+   L   P
Sbjct: 196 YSPKQKQFKQYTDYAGKDFWPSV--DQKGAIFFASDEVNGEYNLYSF-VNGKKTGLTKFP 252

Query: 435 AYASDPQ 441
                P 
Sbjct: 253 TSIKRPA 259



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 95/230 (41%), Gaps = 20/230 (8%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +     +D I      SP+ +K+A+ +  +     +++ D    +  +++      I+
Sbjct: 299 NKQQEFDVKDNISNV-DVSPDGKKMAFVSRGE-----LFVSDIE-GKFVRQMPGQGERIV 351

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFES 320
             ++  + K  L +      ++ +++        ++LT  L  N    ++ D +  V+ S
Sbjct: 352 EVKWLKDNKTLLFNQTYQGYLNWFTIAADGKEQAKQLTKDLRNNRIIEFNKDRTLGVYLS 411

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKK 378
              G++++  +  N      + +D+  ++ +  P +SP G+ I FT +   +  I +   
Sbjct: 412 ---GRDEVRTLDLNTLKSSTVVKDEIWAFQNSSPSFSPDGNYILFTAYRNFEQDIMLHNL 468

Query: 379 DGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKK------DGDTGSKLYSI 421
             +    L      +  PTWSP G+ + F+  +       G   + +Y +
Sbjct: 469 KTNSTVNLTNTGVSELTPTWSPDGKYIYFASNRTKPSYPTGVQNASIYRM 518



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 90/243 (37%), Gaps = 23/243 (9%)

Query: 216 EPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGN------FRSMILAPRFS 266
            P  S N  KV +         D+     +  +I  +   + N       +  I     S
Sbjct: 257 RPAVSANGTKVVFEKDYQLFLYDVATKKTIQPKIAISRNLVLNKQQEFDVKDNISNVDVS 316

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK+     +     +++  D++     ++       +   +  D+  ++F    +G  
Sbjct: 317 PDGKKMAFVSRG----ELFVSDIEGKFVRQMPGQGERIVEVKWLKDNKTLLFNQTYQGYL 372

Query: 327 QLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + + ++G +Q K++++D   +     ++    L  +      +  +  +  +  +   
Sbjct: 373 NWFTIAADGKEQAKQLTKDLRNNRI-IEFNKDRTLGVYLS---GRDEVRTLDLNTLKSST 428

Query: 386 LVED----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +V+D        +P++SP G  ++F+  ++ +    L+++  N     L NT      P 
Sbjct: 429 VVKDEIWAFQNSSPSFSPDGNYILFTAYRNFEQDIMLHNLKTN-STVNLTNTGVSELTPT 487

Query: 442 WVG 444
           W  
Sbjct: 488 WSP 490


>gi|309790683|ref|ZP_07685234.1| peptidase S41 [Oscillochloris trichoides DG6]
 gi|308227277|gb|EFO80954.1| peptidase S41 [Oscillochloris trichoides DG6]
          Length = 1083

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 72/177 (40%), Gaps = 14/177 (7%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D++SV ++     RLT      +  + SPD S + F    EG  ++YVM + G   +R
Sbjct: 21  EDDLWSVGVEGGVARRLTANPGEALRPALSPDGSWLAFTGRDEGVPEVYVMPAIGGPARR 80

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----AIGVMKKDGSQERLLVEDSNLQAPT 396
           ++           W P G  I F+  + + F     +  +   G + RLL     +   +
Sbjct: 81  LTFLGAQRTQVVGWMPDGQTIIFSSEASQPFAGMSQLYAVPHQGGEPRLLPTGPAVSM-S 139

Query: 397 WSPSGRSLI---------FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           + P G ++I         + R + G TG      +  G  + LI+     + P W+G
Sbjct: 140 YGPHGAAVIARNVTDLARWKRYRGGRTGDLWVDPNGQGAWQRLIHLDGNLAAPIWIG 196



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 92/265 (34%), Gaps = 29/265 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +  +G   R LT +  +    P  SP+   +A+   D E +  VY+M      A +
Sbjct: 23  DLWSVGVEGGVARRLTANPGE-ALRPALSPDGSWLAFTGRD-EGVPEVYVMPAIGGPARR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISA 307
                        +  +G+  + S +          +Y+V  Q      L       +S 
Sbjct: 81  LTFLGAQRTQVVGWMPDGQTIIFSSEASQPFAGMSQLYAVPHQGGEPRLLPTGPA--VSM 138

Query: 308 SYSPDSSQIV---------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           SY P  + ++         ++  R G+     +  NG    +     + +   P+W   G
Sbjct: 139 SYGPHGAAVIARNVTDLARWKRYRGGRTGDLWVDPNGQGAWQRLIHLDGNLAAPIW--IG 196

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           + I F         I   + DGS      +  D  ++ P  S  GR +++        G+
Sbjct: 197 ERIFFVSDHEGVANIYSCRADGSDLHRHTDHTDFYVRHP--SSDGRRIVY------HAGA 248

Query: 417 KLYSIDLNGRNETLINTPAYASDPQ 441
            L+ +D       +I    ++  PQ
Sbjct: 249 DLWVLDPTNDQRRIIAVELHSPQPQ 273



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 58/316 (18%), Positives = 108/316 (34%), Gaps = 41/316 (12%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
           +   +W+++ H                   RI FVS          ++     DG+++  
Sbjct: 174 NGQGAWQRLIHL------DGNLAAPIWIGERIFFVS----DHEGVANIYSCRADGSDLHR 223

Query: 206 LTPSRDQILFEPRFSPNQQKVAYAT------YDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            T   D  +  P  S + +++ Y         D  +  R  +        P+R   F   
Sbjct: 224 HTDHTDFYVRHP--SSDGRRIVYHAGADLWVLDPTNDQRRIIAVELHSPQPQRKRRF--- 278

Query: 260 ILAPRF-------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +AP F         N     ++V+       +++     A  +  N         +  D
Sbjct: 279 -VAPEFFLDDYAIHPNATSLALTVRG----RAFTMGNWEGAVVQHGNEQGRTRLTCFLND 333

Query: 313 SSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             +++  SD EG+E L +   +G +  +R++            +P+G+L A T       
Sbjct: 334 GKRLLLLSDAEGEEALEIHSLDGATPPRRLAGLDIGRPLSLQPAPKGELAALTNQR---H 390

Query: 372 AIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSR-KKDGDTGSKLYSIDLNGRNE 428
            + ++  D    R L       + A  WSP GR L +S          +L  +  +G   
Sbjct: 391 ELLLVDLDAGTLRSLDHSPNGRIYAAEWSPDGRWLAYSYPDTRRTRVIRLCEVS-SGAVH 449

Query: 429 TLINTPAYASDPQWVG 444
           T+  T  Y + P W  
Sbjct: 450 TITRTLLYDTSPTWDP 465



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 49/143 (34%), Gaps = 10/143 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRD---QILFEPRFSPNQQKVAYATYDDEDILRVYL 241
                + +L +   DGA         D    +  +P   P  +  A      E    + L
Sbjct: 341 SDAEGEEALEIHSLDGATPPRRLAGLDIGRPLSLQPA--PKGELAALTNQRHE----LLL 394

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNT 300
           +D           +    I A  +S +G+    S        +  + ++ S A   +T T
Sbjct: 395 VDLDAGTLRSLDHSPNGRIYAAEWSPDGRWLAYSYPDTRRTRVIRLCEVSSGAVHTITRT 454

Query: 301 LFINISASYSPDSSQIVFESDRE 323
           L  + S ++ P+ + + F   R+
Sbjct: 455 LLYDTSPTWDPEGNYLYFIGYRD 477



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 59/155 (38%), Gaps = 12/155 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---FRSMILAPRFSSNGKRALIS 275
           F  + +++   + D E    + +        P+R+      R + L P     G+ A ++
Sbjct: 330 FLNDGKRLLLLS-DAEGEEALEIHSLDGATPPRRLAGLDIGRPLSLQPA--PKGELAALT 386

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFES-DREGKEQLYVMQS 333
            Q+    ++  VDL +     L ++      +A +SPD   + +   D      + + + 
Sbjct: 387 NQR---HELLLVDLDAGTLRSLDHSPNGRIYAAEWSPDGRWLAYSYPDTRRTRVIRLCEV 443

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +      I++        P W P+G+ + F  +  
Sbjct: 444 SSGAVHTITRTLLY-DTSPTWDPEGNYLYFIGYRD 477



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 35/95 (36%), Gaps = 1/95 (1%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             ++ L ++D D   +R L  S +  ++   +SP+ + +AY+  D      + L +    
Sbjct: 387 NQRHELLLVDLDAGTLRSLDHSPNGRIYAAEWSPDGRWLAYSYPDTRRTRVIRLCEVSSG 446

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            A   I        +P +   G        +D   
Sbjct: 447 -AVHTITRTLLYDTSPTWDPEGNYLYFIGYRDFDP 480


>gi|186681693|ref|YP_001864889.1| hypothetical protein Npun_F1222 [Nostoc punctiforme PCC 73102]
 gi|186464145|gb|ACC79946.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1212

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 74/454 (16%), Positives = 147/454 (32%), Gaps = 48/454 (10%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPV-SIAFT--KFVS 57
           ++LR    ++      L    +  G      +     +   +A  S + + A +   F+S
Sbjct: 488 VALRDREQKQRERTKRLTFSGLAGGLVLALGLSGLAGIGWGNAEISQINAFAQSSDGFLS 547

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +D     V   V   ++    F + +    + K+T  +++      N+LG        + 
Sbjct: 548 LDGR-KAVESSVKAAVKMRGKFWVDANTRTQVKLTLLNTVHNVAAPNTLGGHAKEVQGIS 606

Query: 118 KEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
                ++          +LWD    K+I  K       S   +  + S D          
Sbjct: 607 FSPDGKMLASASDDNTVKLWDTTTGKEI--KTLTGHTNSV--LGISFSPD---------- 652

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
                     + + S    N++ + D                +    FSP+ + +A A+ 
Sbjct: 653 ---------GKMLASASSDNTVKLWDTTTGKEIKTLTGHTNSVLGISFSPDGKMLASASA 703

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D+     V L DT   +  K +   R+ +    FS +GK    S   D  + ++      
Sbjct: 704 DN----TVKLWDTTTGKEIKTLTGHRNSVFGISFSPDGKMLA-SASADNTVKLWDT-TTG 757

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              + LT         S+SPD   +   S       + +  +    + +       S  D
Sbjct: 758 KEIKTLTGHRNSVFGISFSPDGKMLASASF---DNTVKLWDTTTGKEIKTLTGHRNSVND 814

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKK 410
             +SP G ++A +        +      G + + L    N +   ++SP+G+ L      
Sbjct: 815 ISFSPDGKMLA-SASDDNTVKLW-DTTTGKEIKTLTGHRNSVNDISFSPNGKMLA---SA 869

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             D   KL+        +TL       +D  +  
Sbjct: 870 SFDNTVKLWDTTTGKEIKTLTGHTNSVNDISFSP 903



 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 106/308 (34%), Gaps = 40/308 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+++    D   V  +LWD    K+I                H   + +        G  
Sbjct: 821  GKMLASASDDNTV--KLWDTTTGKEIKTLT-----------GHR--NSVNDISFSPNG-- 863

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    + + S    N++ + D                + +  FSP+ + +A A+ D+
Sbjct: 864  --------KMLASASFDNTVKLWDTTTGKEIKTLTGHTNSVNDISFSPDGKMLASASGDN 915

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L DT   +  K +   R+ +    FS +GK    S   D  + ++        
Sbjct: 916  ----TVKLWDTTTGKEIKTLTGHRNSVNDISFSPDGKMLA-SASGDNTVKLWDT-TTGKE 969

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             + LT         S+SPD   +   S   G + + +  +    + +       S     
Sbjct: 970  IKTLTGHTNSVNGISFSPDGKMLASAS---GDKTVKLWDTTTGKEIKTLTGHTNSVNGIS 1026

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP G ++A    SG+K         G + + L    +++   ++SP G+ L  +     
Sbjct: 1027 FSPDGKMLA--SASGDKTVKLWDTTTGKEIKTLTGHTNSVNGISFSPDGKMLASASS--- 1081

Query: 413  DTGSKLYS 420
            D   KL+ 
Sbjct: 1082 DNTVKLWD 1089



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 57/308 (18%), Positives = 105/308 (34%), Gaps = 35/308 (11%)

Query: 130  LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            LWD    K+I  K       S   I  + S D  + +    GD   ++   +        
Sbjct: 877  LWDTTTGKEI--KTLTGHTNSVNDI--SFSPD-GKMLASASGDNTVKLWDTTT------- 924

Query: 190  KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
                      G  I+ LT  R+ +  +  FSP+ + +A A+ D+     V L DT   + 
Sbjct: 925  ----------GKEIKTLTGHRNSVN-DISFSPDGKMLASASGDN----TVKLWDTTTGKE 969

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             K +    + +    FS +GK    S   D+ + ++         + LT         S+
Sbjct: 970  IKTLTGHTNSVNGISFSPDGKMLA-SASGDKTVKLWDT-TTGKEIKTLTGHTNSVNGISF 1027

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            SPD   +   S   G + + +  +    + +       S     +SP G ++A       
Sbjct: 1028 SPDGKMLASAS---GDKTVKLWDTTTGKEIKTLTGHTNSVNGISFSPDGKMLASASSDNT 1084

Query: 370  KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                         + L    +++   ++SP G+ L  +     D   KL+        +T
Sbjct: 1085 VKLWDTTTTGKKIKTLTGHTNSVNGISFSPDGKMLASASS---DNTVKLWDTTTGKEIKT 1141

Query: 430  LINTPAYA 437
            L     + 
Sbjct: 1142 LTGHTNWV 1149



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 53/314 (16%), Positives = 103/314 (32%), Gaps = 43/314 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+++        V  +LWD    K+I  K       S   I  + S D            
Sbjct: 905  GKMLASASGDNTV--KLWDTTTGKEI--KTLTGHRNSVNDI--SFSPD------------ 946

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    + + S    N++ + D                +    FSP+ + +A A+ D 
Sbjct: 947  -------GKMLASASGDNTVKLWDTTTGKEIKTLTGHTNSVNGISFSPDGKMLASASGDK 999

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L DT   +  K +    + +    FS +GK    S   D+ + ++        
Sbjct: 1000 ----TVKLWDTTTGKEIKTLTGHTNSVNGISFSPDGKMLA-SASGDKTVKLWDT-TTGKE 1053

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP- 352
             + LT         S+SPD   +   S       + +  +  + +K  +     +  +  
Sbjct: 1054 IKTLTGHTNSVNGISFSPDGKMLASASS---DNTVKLWDTTTTGKKIKTLTGHTNSVNGI 1110

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKK 410
             +SP G ++A          + +      +E   +          ++SP G+ L  +   
Sbjct: 1111 SFSPDGKMLASASSDNT---VKLWDTTTGKEIKTLTGHTNWVYGISFSPDGKMLASAST- 1166

Query: 411  DGDTGSKLYSIDLN 424
              D   KL+ +D +
Sbjct: 1167 --DNTVKLWRLDFD 1178


>gi|300772906|ref|ZP_07082775.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300759077|gb|EFK55904.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 1025

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 89/222 (40%), Gaps = 29/222 (13%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNAT-----ERLTN-----TLF 302
           GN   M ++P  S +GK      +KD  ++D++  D  +         RLTN       F
Sbjct: 276 GNSGRMNVSPAISPDGKYVAFLSEKDMFSIDLFLADAHTGKVIRKLGSRLTNKDIDEFSF 335

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLI 361
           +  + ++SPDS +  F     GK +L  +         +    + + F +  W+  GD +
Sbjct: 336 LESAGTFSPDSRKFAFSVFSAGKNKLMTVDIATGKTLSVEAMGDITEFTNITWAADGDHV 395

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSR--------KKDG 412
           AF+        I +      +   L  D  +   P++S  G+S++FS          +  
Sbjct: 396 AFSGLKNGHSDIYIYNLKTKKLDQLTNDVYSDFQPSFSRDGKSIVFSTDRVALASDNRSV 455

Query: 413 DTGSKLYSIDLNGRNETLIN--------TPAYASDPQWVGFM 446
           D    L  +D+  +N   ++         P ++S+ + + F+
Sbjct: 456 DIPMNLAIVDVRTKNIQNLDIFPGANNLNPHFSSNGEQIYFL 497



 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 89/238 (37%), Gaps = 24/238 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---------FR 257
           T +  ++   P  SP+ + VA+ +  D   + ++L D    +  +++G+         F 
Sbjct: 275 TGNSGRMNVSPAISPDGKYVAFLSEKDMFSIDLFLADAHTGKVIRKLGSRLTNKDIDEFS 334

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQ 315
            +  A  FS + ++   SV       + +VD+ +  T  +     I    + +++ D   
Sbjct: 335 FLESAGTFSPDSRKFAFSVFSAGKNKLMTVDIATGKTLSVEAMGDITEFTNITWAADGDH 394

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------K 365
           + F   + G   +Y+         +++ D   S F P +S  G  I F+          +
Sbjct: 395 VAFSGLKNGHSDIYIYNLKTKKLDQLTND-VYSDFQPSFSRDGKSIVFSTDRVALASDNR 453

Query: 366 FSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                  + ++       + L     +N   P +S +G  + F    DG      Y++
Sbjct: 454 SVDIPMNLAIVDVRTKNIQNLDIFPGANNLNPHFSSNGEQIYFLSNGDGYRNMYRYTV 511



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 73/185 (39%), Gaps = 18/185 (9%)

Query: 218 RFSPNQQKVAYATYDDED----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            FSP+ +K A++ +         + +    T    A   I  F ++     ++++G    
Sbjct: 341 TFSPDSRKFAFSVFSAGKNKLMTVDIATGKTLSVEAMGDITEFTNIT----WAADGDHVA 396

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----------E 323
            S  K+   DIY  +L++   ++LTN ++ +   S+S D   IVF +DR          +
Sbjct: 397 FSGLKNGHSDIYIYNLKTKKLDQLTNDVYSDFQPSFSRDGKSIVFSTDRVALASDNRSVD 456

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L ++     + + +     A+  +P +S  G+ I F         +       +Q 
Sbjct: 457 IPMNLAIVDVRTKNIQNLDIFPGANNLNPHFSSNGEQIYFLSNGDGYRNMYRYTVASAQV 516

Query: 384 RLLVE 388
             L +
Sbjct: 517 EKLTD 521



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 92/271 (33%), Gaps = 32/271 (11%)

Query: 122 DRLRVEFRLWDVKDRKQI--IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           D   ++  L D    K I  +G +  +             D    S     G F+     
Sbjct: 301 DMFSIDLFLADAHTGKVIRKLGSRLTNK------------DIDEFSFLESAGTFSPDSRK 348

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            + SV S      + V    G  +               ++ +   VA++   +     +
Sbjct: 349 FAFSVFSAGKNKLMTVDIATGKTLSVEAMGDITEFTNITWAADGDHVAFSGLKNGHS-DI 407

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------DEAMDIYSVDL 289
           Y+ + +  +   ++ N       P FS +GK  + S  +          D  M++  VD+
Sbjct: 408 YIYNLKT-KKLDQLTNDVYSDFQPSFSRDGKSIVFSTDRVALASDNRSVDIPMNLAIVDV 466

Query: 290 QSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           ++   + L       N++  +S +  QI F S+ +G   +Y      +  ++++      
Sbjct: 467 RTKNIQNLDIFPGANNLNPHFSSNGEQIYFLSNGDGYRNMYRYTVASAQVEKLTDYFTGI 526

Query: 349 YFDPVWSPQG-----DLIAFTKFSGEKFAIG 374
                +SP       D I ++ F    +++ 
Sbjct: 527 SGITEYSPAMSISATDEIVYSYFKNNAYSVY 557


>gi|116624613|ref|YP_826769.1| periplasmic component of the Tol biopolymer transporter-like
           protein [Candidatus Solibacter usitatus Ellin6076]
 gi|116227775|gb|ABJ86484.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 538

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 19/195 (9%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           + +  ++  +P  S++G+ A  +  +D   +++Y   + S    RLT T       ++SP
Sbjct: 38  LTSGAALTASPAISADGQLAAYASDRDARNLELYVQPIPSGMPVRLTRTPEDESEPAFSP 97

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           DS  + F S++ G   +YVM + G D K ++Q       DP +SP G  IA+        
Sbjct: 98  DSGSLAFRSEKGGG-GIYVMPARGGDAKLLAQGGR----DPRYSPDGKWIAYWDQD---- 148

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           A  V+  +G   R +      + P WSP G  ++     +       + +   G      
Sbjct: 149 AAWVIPSNGGTARKIFATPGARHPIWSPDGALVLAQANNE-------FVVGAVGVAPAPA 201

Query: 432 NTPA--YASDPQWVG 444
             P    A  PQW  
Sbjct: 202 GIPGRLQADSPQWTA 216



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 86/247 (34%), Gaps = 32/247 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                 S   +   P  S + Q  AYA+  D   L +Y+        P R+         
Sbjct: 34  AFVPLTSGAALTASPAISADGQLAAYASDRDARNLELYVQPIPSG-MPVRLTRTPEDESE 92

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS +        +K     IY +  +    + L           YSPD   I +    
Sbjct: 93  PAFSPDSGSLAFRSEKGGGG-IYVMPARGGDAKLLAQGG---RDPRYSPDGKWIAYW--- 145

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK----K 378
             ++  +V+ SNG   ++I     A +  P+WSP G L+     +  +F +G +      
Sbjct: 146 -DQDAAWVIPSNGGTARKIFATPGARH--PIWSPDGALVL--AQANNEFVVGAVGVAPAP 200

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE------TLIN 432
            G   RL        +P W+  G   +F  ++ G     ++ I L+ R         + +
Sbjct: 201 AGIPGRL-----QADSPQWTAGG---LFFVERTG-WVRNIWRIPLDARGRATAAAMRVTS 251

Query: 433 TPAYASD 439
            P    D
Sbjct: 252 GPESIGD 258



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 93/271 (34%), Gaps = 48/271 (17%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLM-DTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P+++         T    +I R+ L    R   A  R+ +    I     S +G+    +
Sbjct: 212 PQWTAGGLFFVERTGWVRNIWRIPLDARGRATAAAMRVTSGPESIGDVAVSRDGRILFTA 271

Query: 276 VQKDEAMDIYSVDLQSNAT----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             ++  +    +D  +       +RLT+        + S D   +++++ R G +QL++ 
Sbjct: 272 GSQNFQVWGLPLDANTGKPAGVPQRLTDGAATLEHPAISADGRLLLYDAQRYGLQQLFLR 331

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLI------AFTKFSGEKF-------------A 372
                + +R++  K A      +   G +I       +      K               
Sbjct: 332 DLASGE-ERVAAAKPAGVSGGQFLRGGRIIYGSGGDVYVTGESRKLAAGGRPLAVDRKEE 390

Query: 373 IGVMKKDG--------SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           I +++           S ER+ +  + +    +SP  R + FS      TG ++Y     
Sbjct: 391 IALVRSPSSLDALNLKSLERVPLLRAAISQAAFSPDDRWIAFS------TGGRIYRAPNR 444

Query: 425 GRNETLINT---------PAYASDPQWVGFM 446
           G  E   +          P ++ D   + F+
Sbjct: 445 GLQEIPRSEWLPVAAGDKPRFSPDGSLLYFV 475



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 66/223 (29%), Gaps = 36/223 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRA---PKRIGNFRSMILAPRFSSNGKRALI 274
             S +  ++ +        +    +D    +    P+R+ +  + +  P  S++G+  L 
Sbjct: 260 AVSRDG-RILFTAGSQNFQVWGLPLDANTGKPAGVPQRLTDGAATLEHPAISADGRLLLY 318

Query: 275 SVQKDEAMDIYSVDLQSNATE------------------RLTNTLFINI-----SASYSP 311
             Q+     ++  DL S                      R+      ++     S   + 
Sbjct: 319 DAQRYGLQQLFLRDLASGEERVAAAKPAGVSGGQFLRGGRIIYGSGGDVYVTGESRKLAA 378

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGE 369
               +  +   E          +  + K + +     A+     +SP    IAF+     
Sbjct: 379 GGRPLAVDRKEEIALVRSPSSLDALNLKSLERVPLLRAAISQAAFSPDDRWIAFS----T 434

Query: 370 KFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRK 409
              I      G QE    E    +    P +SP G  L F   
Sbjct: 435 GGRIYRAPNRGLQEIPRSEWLPVAAGDKPRFSPDGSLLYFVAD 477


>gi|114798295|ref|YP_761023.1| amidohydrolase family protein [Hyphomonas neptunium ATCC 15444]
 gi|114738469|gb|ABI76594.1| amidohydrolase family protein [Hyphomonas neptunium ATCC 15444]
          Length = 1077

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 24/201 (11%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                +L+   S  G   +     D   DIY++ +      RLT+ + ++    +SPD  
Sbjct: 60  TDEGSLLSLDVSPAGDVLVF----DMLGDIYTLPVSGGKAARLTSGMAMDSQPVWSPDGK 115

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKF--SGEKF 371
            ++F SDR G E L++M ++G + ++IS  D    +  P W+P G  I  T++      +
Sbjct: 116 AVLFVSDRSGAENLWLMDADGGNPRQISLYDDNPVFVSPEWAPDGKSILVTRYWADRNAY 175

Query: 372 AIGVMKK---DGSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGDTGSK---- 417
            +   +    D  +     +  +  A +       +S  G ++  +  K+GD        
Sbjct: 176 ELWRFRPVAGDMGEVLRATQGGDGSAVSTSSLGARYSADGGAIYLASLKEGDPAFNALAA 235

Query: 418 --LYSID-LNGRNETLINTPA 435
             +  ID + G    ++   A
Sbjct: 236 WGIVRIDPVTGEEAAVLPAGA 256



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 33/227 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP    + +    D     +Y +         R+ +  +M   P +S +GK  L    + 
Sbjct: 71  SPAGDVLVFDMLGD-----IYTLPV-SGGKAARLTSGMAMDSQPVWSPDGKAVLFVSDRS 124

Query: 280 EAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIV---FESDREGKE--QLYVMQ 332
            A +++ +D       +++  +   + +S  ++PD   I+   + +DR   E  +   + 
Sbjct: 125 GAENLWLMDADGGNPRQISLYDDNPVFVSPEWAPDGKSILVTRYWADRNAYELWRFRPVA 184

Query: 333 SNGSDQKRISQDKEASYFDPV-----WSPQGDLIAFTKFSGEK--------FAIGVMKK- 378
            +  +  R +Q  + S          +S  G  I                 + I  +   
Sbjct: 185 GDMGEVLRATQGGDGSAVSTSSLGARYSADGGAIYLASLKEGDPAFNALAAWGIVRIDPV 244

Query: 379 DGSQERLLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGSKLY 419
            G +  +L   +  ++      P  SP G+SL+F  +++G T  K+ 
Sbjct: 245 TGEEAAVLPAGAAGESVVPRFRPAVSPDGQSLVFGERREGVTLLKVM 291



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 55/281 (19%), Positives = 102/281 (36%), Gaps = 38/281 (13%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  +   G     LT S   +  +P +SP+ + V + + D      ++LMD      P+
Sbjct: 84  DIYTLPVSGGKAARLT-SGMAMDSQPVWSPDGKAVLFVS-DRSGAENLWLMDAD-GGNPR 140

Query: 252 RIG--NFRSMILAPRFSSNGKRALIS--VQKDEAMDIYSV-DLQSNATERLTNTLFINIS 306
           +I   +   + ++P ++ +GK  L++       A +++    +  +  E L  T   + S
Sbjct: 141 QISLYDDNPVFVSPEWAPDGKSILVTRYWADRNAYELWRFRPVAGDMGEVLRATQGGDGS 200

Query: 307 --------ASYSPDSSQIVFESDREGKE--------QLYVMQSNGSDQKRISQDKEAS-- 348
                   A YS D   I   S +EG           +  +     ++  +     A   
Sbjct: 201 AVSTSSLGARYSADGGAIYLASLKEGDPAFNALAAWGIVRIDPVTGEEAAVLPAGAAGES 260

Query: 349 ---YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSL 404
               F P  SP G  + F +       + VM  +    R L E D +    + +      
Sbjct: 261 VVPRFRPAVSPDGQSLVFGERREGVTLLKVMHLESGAVRTLGEVDPDAVLASLTHD---- 316

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
             +R      G  LY ++  GR +  I     A++P  V F
Sbjct: 317 AIARYDFSADGKALY-VNRQGRIDR-IALDGGAAEP--VPF 353



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 64/190 (33%), Gaps = 24/190 (12%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES- 320
           +P  S +G   + +        +Y   L+  A   +          S+S D + + F S 
Sbjct: 383 SPELSPDGAALVFTA----LGRLYVQALEGGAPRLVRGEGETGYHPSWSADGAALAFVSW 438

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----------FSGEK 370
            +     +++        ++IS +  A Y  PV++P G  I   +              +
Sbjct: 439 TKAAGGDVWIAPQADGPARKISAET-AFYTHPVFTPDGSAIVVVRSPAETRRRTYMEYGQ 497

Query: 371 F---AIGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +    + VM  DG+  R+L        P ++   G  LI      G     +   D   R
Sbjct: 498 WREAELVVMPLDGAPSRVLAAGRMGGTPHFAADPGEVLI----NTGKGVEAVSLADGARR 553

Query: 427 NETLINTPAY 436
             T    P +
Sbjct: 554 VVTQAVGPGW 563



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 85/272 (31%), Gaps = 53/272 (19%)

Query: 218 RFSPNQQKVAYATYDDEDIL--------RVYLMDTRIDRAPKRIGNFRSMILAPRF---- 265
           R+S +   +  A+  + D           V +     + A           + PRF    
Sbjct: 210 RYSADGGAIYLASLKEGDPAFNALAAWGIVRIDPVTGEEAAVLPAGAAGESVVPRFRPAV 269

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----------YSPDSSQ 315
           S +G+  +   +++    +  + L+S A   L       + AS          +S D   
Sbjct: 270 SPDGQSLVFGERREGVTLLKVMHLESGAVRTLGEVDPDAVLASLTHDAIARYDFSADGKA 329

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASY----------------------FDPV 353
           +    +R+G  ++  +  +G   + +    + S                         P 
Sbjct: 330 LY--VNRQG--RIDRIALDGGAAEPVPFTADVSQDLGPLGRHPARIEGGAVRARLIQSPE 385

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG 412
            SP G  + FT        + V   +G   RL+  E      P+WS  G +L F      
Sbjct: 386 LSPDGAALVFTALG----RLYVQALEGGAPRLVRGEGETGYHPSWSADGAALAFVSWTKA 441

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             G    +   +G    +    A+ + P +  
Sbjct: 442 AGGDVWIAPQADGPARKISAETAFYTHPVFTP 473



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 75/245 (30%), Gaps = 37/245 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V   +G   R L     +  + P +S +   +A+ ++       V++   + D   +
Sbjct: 400 RLYVQALEGGAPR-LVRGEGETGYHPSWSADGAALAFVSWTKAAGGDVWI-APQADGPAR 457

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQ-------------KDEAMDIYSVDLQSNATERLT 298
           +I    +    P F+ +G   ++                +    ++  + L    +  L 
Sbjct: 458 KISAETAFYTHPVFTPDGSAIVVVRSPAETRRRTYMEYGQWREAELVVMPLDGAPSRVLA 517

Query: 299 NTLFINISASYSPD--------SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                     ++ D           +   S  +G  ++               +  A+  
Sbjct: 518 AGRMGGT-PHFAADPGEVLINTGKGVEAVSLADGARRVVTQAV---GPGWYFSEGPAAAD 573

Query: 351 DPVWSPQGDL-IAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           D   SP G   +A        + +G       +    G+  +L    ++     WS  G+
Sbjct: 574 DLRVSPDGQWALAQIAHQLHLYRLGSAGETFDLSNPSGAHVQLTDIGADYFG--WSEDGQ 631

Query: 403 SLIFS 407
            + ++
Sbjct: 632 EIYWA 636


>gi|332829130|gb|EGK01794.1| hypothetical protein HMPREF9455_01942 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 1082

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 70/204 (34%), Gaps = 30/204 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G +     + D    IY V        ++T     +    +SPDS  I F SDRE
Sbjct: 30  TISPDGNQIAFCYKGD----IYKVSASGGRAMQITTHPGYDTRPVWSPDSKSIAFSSDRE 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----FSGEKF------A 372
           G   +Y++ + G   +R++      Y  PV     + + ++          +F       
Sbjct: 86  GSLDVYLVSAEGGAPQRLTTHSAGEY--PVAFRDNERLLYSASIIQDVKDGEFPSGLFAQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF----------SRKKDGDTGSKLYSID 422
           I  +   G +   L     ++  +  PSG  +++           +         L+  D
Sbjct: 144 IYEINTSGGRPS-LFSSLTMEDLSIDPSGTKILYHDRKGYEDPWRKHHQSSITRDLWLCD 202

Query: 423 LNGRN--ETLINTPAYASDPQWVG 444
           L+G    + L        +P W  
Sbjct: 203 LSGERTYKKLTTFRGEDRNPVWAA 226



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 81/223 (36%), Gaps = 35/223 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  ++A+      DI +V    +       +I         P +S + K    S  
Sbjct: 30  TISPDGNQIAFCY--KGDIYKV----SASGGRAMQITTHPGYDTRPVWSPDSKSIAFSSD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----REGKE------ 326
           ++ ++D+Y V  +  A +RLT         ++  D+ ++++ +      ++G+       
Sbjct: 84  REGSLDVYLVSAEGGAPQRLTTHSAGEYPVAF-RDNERLLYSASIIQDVKDGEFPSGLFA 142

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIG 374
           Q+Y + ++G    R S     +  D    P G  I +               S     + 
Sbjct: 143 QIYEINTSGG---RPSLFSSLTMEDLSIDPSGTKILYHDRKGYEDPWRKHHQSSITRDLW 199

Query: 375 VMKKDG--SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +    G  + ++L       + P W+  G++  +  ++ G   
Sbjct: 200 LCDLSGERTYKKLTTFRGEDRNPVWAADGQNFYYLSEQSGSFN 242



 Score = 96.2 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 53/291 (18%), Positives = 105/291 (36%), Gaps = 57/291 (19%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSM 259
             +R+L+ S+   L    FS + +   Y   + +   +V +     ++  K +  NF + 
Sbjct: 262 HPVRFLSSSKQGKLC---FSYDGE--IYTMNEGQQPQKVNIQIATDNQENKLKYINFSTG 316

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                 S +GK     ++ D    ++   ++   T R+TNT     + S+SPD   +++ 
Sbjct: 317 AREMAVSPSGKEVAFVIRGD----VFVASVEYGTTRRITNTPEQERNVSFSPDGRSVLYA 372

Query: 320 SDREGKEQLYVMQSNGSD-----------QKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++R G   +Y       +           +++++    AS F P++SP G  IA+ +   
Sbjct: 373 AERNGLWNVYQSTLTHKEDESFVYAKDFKEEQLTNSTLAS-FQPLYSPDGKEIAYLENRT 431

Query: 369 EKFAIGVMKKDGSQERLLVEDS-------NLQAPTWSPSGRSLIFSRKKDGDTGS---KL 418
               + V+     + R +++           Q   W+P  + L+      G   S    L
Sbjct: 432 T---LRVLNLASKEIRTILDGKFNYSYADGDQWFRWAPDSKWLLTQYIGIGGWNSTDAAL 488

Query: 419 YSIDLNGRNETLINTP----------------------AYASDPQWVGFMD 447
              D +G    L  +                        Y S   W  +MD
Sbjct: 489 VKADGSGELTNLTESGYSDANPRFVQDGKAMIWFSDRAGYRSHGSWGAYMD 539



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 50/332 (15%), Positives = 97/332 (29%), Gaps = 85/332 (25%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     +T         P +SP+ + +A+++ D E  L VYL+      
Sbjct: 42  YKGDIYKVSASGGRAMQITT-HPGYDTRPVWSPDSKSIAFSS-DREGSLDVYLVSAE-GG 98

Query: 249 APKRIGNFRSMILAPRFS------------------------------------------ 266
           AP+R+    +      F                                           
Sbjct: 99  APQRLTTHSAGEYPVAFRDNERLLYSASIIQDVKDGEFPSGLFAQIYEINTSGGRPSLFS 158

Query: 267 ----------SNGKRALISVQKDE------------AMDIYSVDLQS-NATERLTNTLFI 303
                      +G + L   +K                D++  DL      ++LT     
Sbjct: 159 SLTMEDLSIDPSGTKILYHDRKGYEDPWRKHHQSSITRDLWLCDLSGERTYKKLTTFRGE 218

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL--- 360
           + +  ++ D     + S++ G   +Y    N S   +++  ++        S QG L   
Sbjct: 219 DRNPVWAADGQNFYYLSEQSGSFNIYKSGLNVSTPVKLTNLEKHPVRFLSSSKQGKLCFS 278

Query: 361 ---IAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
                +T   G+        I    ++   + +       +    SPSG+ + F  + D 
Sbjct: 279 YDGEIYTMNEGQQPQKVNIQIATDNQENKLKYINFSTGAREM-AVSPSGKEVAFVIRGDV 337

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              S  Y     G    + NTP    +  +  
Sbjct: 338 FVASVEY-----GTTRRITNTPEQERNVSFSP 364



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 36/97 (37%), Gaps = 9/97 (9%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              SP G+ IAF         I  +   G +  ++         P WSP  +S+ FS  +
Sbjct: 29  CTISPDGNQIAFCYKGD----IYKVSASGGRAMQITTHPGYDTRPVWSPDSKSIAFSSDR 84

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           +G     +Y +   G     + T +    P  V F D
Sbjct: 85  EGS--LDVYLVSAEGGAPQRLTTHSAGEYP--VAFRD 117


>gi|326491569|dbj|BAJ94262.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 654

 Score =  111 bits (277), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 65/370 (17%), Positives = 117/370 (31%), Gaps = 71/370 (19%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              L+D++  +      F +  +      H      Y       G       F    V  
Sbjct: 277 HIELFDLETEQ------FTAVTSLLNPELHH-----YNPFFSPSGGRLGYHRFRGAGVQG 325

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
             +   L  +    ++IR L          P FSP+ +  A      +      +   R 
Sbjct: 326 DSMIPYLQPVRSPVSSIRMLRVHGS----FPSFSPDAKHFALNGDFFKSPG---VTILRA 378

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQK--------------------DEAMDIYS 286
           D + + +   +  +    +S      + +                           D   
Sbjct: 379 DGSKRWVLAKQPNLFYTSWSPTESGVVFTSIGPIFETPKATVRVARIEFDPSGLTDDRGD 438

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--KRISQD 344
           VD+      R       +   + SP    +VF S R G + LY++ +   ++  +R++ D
Sbjct: 439 VDVAVKELTR--PEAGNDAFPAVSPCGRWVVFRSGRSGHKNLYIVDAARGEETIRRVT-D 495

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLL----------VED 389
            E     P WSP G+LIAF+    E      F+I +++ DG+  R +           + 
Sbjct: 496 GEWIDTMPSWSPDGELIAFSSNRHEPANAAVFSIYLVRPDGTGLRRVHVAGPAGSAEADK 555

Query: 390 SNLQAPTWSPSGRSLIFSRKKDG------------DTGSKLYSIDLNGRNETLINTPAY- 436
             +    +SP G+ L+F+    G                 LY   L+G     +   AY 
Sbjct: 556 ERINHVCFSPDGQWLLFTATLGGVMAEPISGPNQFQPYGDLYVCRLDGSGVLRLTCNAYE 615

Query: 437 ASDPQWVGFM 446
              P W   +
Sbjct: 616 NGTPTWGPAL 625



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 103/312 (33%), Gaps = 46/312 (14%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD---- 232
           I   +           L  ++ +         + +   + P FSP+  ++ Y  +     
Sbjct: 264 IAVATRRKGLAKRHIELFDLETEQFTAVTSLLNPELHHYNPFFSPSGGRLGYHRFRGAGV 323

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             D +  YL   R   +  R+         P FS + K   ++    ++  +  +    +
Sbjct: 324 QGDSMIPYLQPVRSPVSSIRMLRVHG--SFPSFSPDAKHFALNGDFFKSPGVTILRADGS 381

Query: 293 ATERLTNTLFINISASYSPDSSQIVFES------DREGKEQLYVMQSNGSD--------- 337
               L     +  + S+SP  S +VF S        +   ++  ++ + S          
Sbjct: 382 KRWVLAKQPNLFYT-SWSPTESGVVFTSIGPIFETPKATVRVARIEFDPSGLTDDRGDVD 440

Query: 338 --QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQ 393
              K +++ +  +   P  SP G  + F         + ++     +E  R + +   + 
Sbjct: 441 VAVKELTRPEAGNDAFPAVSPCGRWVVFRSGRSGHKNLYIVDAARGEETIRRVTDGEWID 500

Query: 394 -APTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPA-------------- 435
             P+WSP G  + FS  +     +    +Y +  +G     ++                 
Sbjct: 501 TMPSWSPDGELIAFSSNRHEPANAAVFSIYLVRPDGTGLRRVHVAGPAGSAEADKERINH 560

Query: 436 --YASDPQWVGF 445
             ++ D QW+ F
Sbjct: 561 VCFSPDGQWLLF 572



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 61/185 (32%), Gaps = 18/185 (9%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD-SSQIVFESDREGKEQLYVM 331
           + SV   +  +  SV     A  R T+ + +N +A ++ D   ++ F S+R G   L++ 
Sbjct: 25  VFSVAVPQTPE--SVSAAGLAERRHTDGVSVNFNAQFADDVGEEVAFVSERTGSAGLFLC 82

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-----GVMKKDGSQE--- 383
           +        +    E S F    + +G  + F     +  A       V   +   E   
Sbjct: 83  RPESERAVPL-PVVEGSLFHDRPAVRGGRLYFVSSHEKPAAWFRSWAAVYATELGSEETV 141

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL------YSIDLNGRNETLINTPAYA 437
           R+  +     +P  S SG  L  +   +              ++         +   A  
Sbjct: 142 RVTPQGVADMSPAVSTSGELLAVASYGERPWAFDFHELETEVAVFRAADPARRVVVAARG 201

Query: 438 SDPQW 442
             P W
Sbjct: 202 GWPTW 206


>gi|167765001|ref|ZP_02437122.1| hypothetical protein BACSTE_03395 [Bacteroides stercoris ATCC
           43183]
 gi|167697670|gb|EDS14249.1| hypothetical protein BACSTE_03395 [Bacteroides stercoris ATCC
           43183]
          Length = 1088

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 65/173 (37%), Gaps = 40/173 (23%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G   +   + D    IY V  +     +LT       S  +SPD  QI F SDR+G 
Sbjct: 31  SPDGTEIVFCYKGD----IYKVSAKGGTATQLTTQESYESSPVWSPDGKQIAFASDRQGN 86

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             ++VM S+G   +R++ +  A      ++P G  I F+          +    GS    
Sbjct: 87  FDVFVMPSDGGAAQRLTTNS-AGEIPSAFTPDGKYILFSA--------AIQDPAGSAL-- 135

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYA 437
                    P+                   ++LY +    GR E ++ TPA A
Sbjct: 136 --------FPS----------------PAMTELYKVPATGGRTEQVLGTPAEA 164



 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 86/228 (37%), Gaps = 36/228 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++ +      DI +V    +       ++    S   +P +S +GK+   +  +
Sbjct: 30  ISPDGTEIVFCY--KGDIYKV----SAKGGTATQLTTQESYESSPVWSPDGKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGK--------EQ 327
               D++ +     A +RLT      I ++++PD   I+F +   D  G          +
Sbjct: 84  QGNFDVFVMPSDGGAAQRLTTNSAGEIPSAFTPDGKYILFSAAIQDPAGSALFPSPAMTE 143

Query: 328 LYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIG 374
           LY + + G   +++     EA  FD      GD+  +               S     I 
Sbjct: 144 LYKVPATGGRTEQVLGTPAEALCFDKT----GDMFFYQDQKGFEDQWRKHHTSSITRDIW 199

Query: 375 VMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +      +   L       + P  SP G++L F  +++G +   +YS+
Sbjct: 200 MYDCRTEKHTNLTRHAGEDRNPVLSPDGQTLYFLSERNGGS-FNVYSL 246



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 97/260 (37%), Gaps = 32/260 (12%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +R+L+ S +  L    +  + +   Y   D     +V +   R DR       F +  
Sbjct: 263 HPVRFLSISGNGTLC---YGYDGE--IYTQQDGAAPQKVQIEIIRDDRPDTARLTFTNGA 317

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +   S +GK+     +     +++        T+++T+T       S++PD+  + + S
Sbjct: 318 TSATVSPDGKQVAFIARG----EVFVTSADYATTKQITHTPAGESGLSFAPDNRTLAYAS 373

Query: 321 DREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +R G  QLY+             +   +++ +          P +SP G  +AF +   +
Sbjct: 374 ERNGNWQLYLAKIVRKEDPNFPNATIVEEEALLPSATVERAFPQFSPDGKELAFIE---D 430

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFSRKKDGDTGSKLYSI 421
           +  + V+  D  + R + + S   +        WSP G+   L F   +  D  S +  +
Sbjct: 431 RTRLMVVNLDTKKVRQITDGSTWYSTDGGFDYAWSPDGKWFTLEFIGNRH-DPYSDIGLV 489

Query: 422 DLNGRNETLINTPAYASDPQ 441
              G +  +  T +      
Sbjct: 490 SAQGNSPIINLTNSGYMSGS 509



 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 78/216 (36%), Gaps = 30/216 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++VA+    +        + +      K+I +  +      F+ + +    + +
Sbjct: 321 TVSPDGKQVAFIARGE------VFVTSADYATTKQITHTPAGESGLSFAPDNRTLAYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS------------ASYSPDSSQIVFESDREGK 325
           ++    +Y   +         N   +                 +SPD  ++ F  DR   
Sbjct: 375 RNGNWQLYLAKIVRKEDPNFPNATIVEEEALLPSATVERAFPQFSPDGKELAFIEDRT-- 432

Query: 326 EQLYVMQSNGSDQKRISQDKEASY----FDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+  +    ++I+           FD  WSP G    + F     + +  IG++  
Sbjct: 433 -RLMVVNLDTKKVRQITDGSTWYSTDGGFDYAWSPDGKWFTLEFIGNRHDPYSDIGLVSA 491

Query: 379 DGSQERL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            G+   + L     +  +P ++  G +++F  ++ G
Sbjct: 492 QGNSPIINLTNSGYMSGSPRFALDGNAILFKTERYG 527



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 7/89 (7%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
            SP G  I F         I  +   G     L    + ++ P WSP G+ + F+  + G
Sbjct: 30  ISPDGTEIVFCYKGD----IYKVSAKGGTATQLTTQESYESSPVWSPDGKQIAFASDRQG 85

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +    ++ +  +G     + T +    P 
Sbjct: 86  NF--DVFVMPSDGGAAQRLTTNSAGEIPS 112



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 55/273 (20%), Positives = 101/273 (36%), Gaps = 43/273 (15%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-- 263
           L PS       P+FSP+ +++A+        L V  +DT+  R       + S       
Sbjct: 405 LLPSATVERAFPQFSPDGKELAFIEDRTR--LMVVNLDTKKVRQITDGSTWYSTDGGFDY 462

Query: 264 RFSSNGKRA---LISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFE 319
            +S +GK      I  + D   DI  V  Q N+    LTN+ +++ S  ++ D + I+F+
Sbjct: 463 AWSPDGKWFTLEFIGNRHDPYSDIGLVSAQGNSPIINLTNSGYMSGSPRFALDGNAILFK 522

Query: 320 SDREG-----------KEQLYVMQSNGSDQKRISQDKE------ASYFDPVWSPQ----- 357
           ++R G              L  +  +  D+  +S++         +      S       
Sbjct: 523 TERYGMRAHASWGSQDDAMLVFLNQDAYDKYCLSKEDYELRKELEAEQKKAQSKDTAKGK 582

Query: 358 -------GDLIAFTKFSGEKFAIGV--MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                  G   A      +   I V     +    RL    S++ +   S  G +L +  
Sbjct: 583 KGSKKDAGQEKAADDDKAQVKDITVELKNMEDRMVRLTPNSSDMGSVIISKDGETLYYFA 642

Query: 409 KKDGDTGSKLYSIDLNGRNETLIN--TPAYASD 439
             +G  G  L+ +DL  ++  L++     +AS 
Sbjct: 643 AFEG--GYDLWKMDLRKKDTRLLHKMDAGWASM 673



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 7/48 (14%)

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVG 444
           SP G  ++F  K        +Y +   G   T + T  +Y S P W  
Sbjct: 31  SPDGTEIVFCYK------GDIYKVSAKGGTATQLTTQESYESSPVWSP 72


>gi|145237008|ref|XP_001391151.1| hypothetical protein ANI_1_1414064 [Aspergillus niger CBS 513.88]
 gi|134075616|emb|CAK39282.1| unnamed protein product [Aspergillus niger]
          Length = 681

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 66/320 (20%), Positives = 114/320 (35%), Gaps = 63/320 (19%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            + +F+   +  G   + L + + DG+N R L  S     +   FSP+ + + + +  + 
Sbjct: 65  QKGVFMMNRIAPGT--SELYIANTDGSNERPLL-SNPVYEYHASFSPDVEWITFTSERNG 121

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNA 293
           D               + +    ++  +   S NG+ A   S   +   +I+ +DLQ+ A
Sbjct: 122 DGNSDIYRVRTNGSDLQELVATPAVEDSVVISPNGRLAAYVSTANNMKANIWILDLQTGA 181

Query: 294 TERLTNTL--FINIS-------ASYSPDSSQIVFESDRE------GKEQ----------- 327
              LTNT     N S        ++SPD   I F SDR       G              
Sbjct: 182 QWNLTNTPTTAANSSLMESYLRPAWSPDGEWIAFSSDRNTQWDGHGVPTFLGRTGWETTQ 241

Query: 328 ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIG--------- 374
              LY ++ NGSD ++I      S   P WS  G  I + +    + +            
Sbjct: 242 ELSLYAIRPNGSDFRQIISKPYYSLGSPKWSADGKRIVYYEMTREDTYNAHRPETITTAN 301

Query: 375 --VMKKD---GSQERLLVEDSNL-QAPTWSPSGRSLIFS----RKKDGDTGSKLYSIDLN 424
             +M  D   G+  R+ V  S + Q P +     ++ ++      +   T + LY     
Sbjct: 302 STIMSVDFETGTDVRVEVAGSGVKQFPQYLDKNGTIAYTLKGGTSEGFYTTAGLY----- 356

Query: 425 GRNETLINTPAYASDPQWVG 444
                +  T A    P W  
Sbjct: 357 -----VNTTSATLRSPAWSP 371



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 49/211 (23%), Positives = 83/211 (39%), Gaps = 36/211 (17%)

Query: 269 GKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EG 324
           G++ +  + +      ++Y  +   +    L +       AS+SPD   I F S+R  +G
Sbjct: 64  GQKGVFMMNRIAPGTSELYIANTDGSNERPLLSNPVYEYHASFSPDVEWITFTSERNGDG 123

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQE 383
              +Y +++NGSD + +     A     V SP G L A+   +   K  I ++      +
Sbjct: 124 NSDIYRVRTNGSDLQELV-ATPAVEDSVVISPNGRLAAYVSTANNMKANIWILDLQTGAQ 182

Query: 384 RLLVEDSNLQA----------PTWSPSGRSLIFSRKKD------------GDTGSK---- 417
             L       A          P WSP G  + FS  ++            G TG +    
Sbjct: 183 WNLTNTPTTAANSSLMESYLRPAWSPDGEWIAFSSDRNTQWDGHGVPTFLGRTGWETTQE 242

Query: 418 --LYSIDLNGRN-ETLINTPAYA-SDPQWVG 444
             LY+I  NG +   +I+ P Y+   P+W  
Sbjct: 243 LSLYAIRPNGSDFRQIISKPYYSLGSPKWSA 273



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 103/312 (33%), Gaps = 52/312 (16%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGA--NIRYLTPSRDQILFEPRFSPNQQKVAY- 228
             +    F      +G I  +L     +G          +    L  P +SP+ ++V Y 
Sbjct: 320 AGSGVKQFPQYLDKNGTIAYTLKGGTSEGFYTTAGLYVNTTSATLRSPAWSPDGKQVVYE 379

Query: 229 --ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                      ++Y  D+  D     +    S           +R  I+ ++     I +
Sbjct: 380 KSTWSIRSGYKQLYSWDSDWDYRFTDVFPQVSHQ---------ERVAITQKQLGNSSIVT 430

Query: 287 VDLQSNATERL----TNTLFINIS--------ASYSPDSSQIVF-------ESDREGKEQ 327
           ++      + +    T     +           S+SP    +VF         +  G   
Sbjct: 431 LNTTGGDLQLVYDPSTADFVSDDETTGLSAYQPSWSPCGEWLVFGVGFWFETREASGGW- 489

Query: 328 LYVMQSNGSDQKR-------ISQDKEASYFDPVWSPQGDLIAF--------TKFSGEKFA 372
           +    +NGS  +        I++D   +   P +SP G  + +        T  +  +  
Sbjct: 490 IVRATANGSYSEVLVNSSYSITEDGALNSGFPSFSPDGKKVVYRVWGADTATYGNASEIG 549

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + V+  +  +  +L  + +   P +SP G  ++F+RK        + +I  +G +  ++ 
Sbjct: 550 LRVLDLETRKTTVLTTEWD-NLPQFSPDGELILFTRKTS-TYNYDVCTIRPDGTDLRVLT 607

Query: 433 TPA-YASDPQWV 443
           +     +   W 
Sbjct: 608 SSGANDAHAVWS 619



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 66/365 (18%), Positives = 123/365 (33%), Gaps = 101/365 (27%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           + D +    F+  +      + SL  +  +G++ R +       L  P++S + +++ Y 
Sbjct: 222 QWDGHGVPTFLGRTGWETTQELSLYAIRPNGSDFRQIISKPYYSLGSPKWSADGKRIVYY 281

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS-VD 288
               ED    +         P+ I    S I++  F + G    + V           +D
Sbjct: 282 EMTREDTYNAH--------RPETITTANSTIMSVDFET-GTDVRVEVAGSGVKQFPQYLD 332

Query: 289 LQSNATERL----------TNTLFINI------SASYSPDSSQIVFE----SDREGKEQL 328
                   L          T  L++N       S ++SPD  Q+V+E    S R G +QL
Sbjct: 333 KNGTIAYTLKGGTSEGFYTTAGLYVNTTSATLRSPAWSPDGKQVVYEKSTWSIRSGYKQL 392

Query: 329 YVMQSN------------------------------------GSDQKRISQDKEASY--- 349
           Y   S+                                    G D + +     A +   
Sbjct: 393 YSWDSDWDYRFTDVFPQVSHQERVAITQKQLGNSSIVTLNTTGGDLQLVYDPSTADFVSD 452

Query: 350 --------FDPVWSPQGDLIAF-------TKFSGEKFAIGVMKKDGSQERLLVEDS---- 390
                   + P WSP G+ + F       T+ +   + +     +GS   +LV  S    
Sbjct: 453 DETTGLSAYQPSWSPCGEWLVFGVGFWFETREASGGWIVRA-TANGSYSEVLVNSSYSIT 511

Query: 391 -----NLQAPTWSPSGRSLIF------SRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                N   P++SP G+ +++      +      +   L  +DL  R  T++ T  + + 
Sbjct: 512 EDGALNSGFPSFSPDGKKVVYRVWGADTATYGNASEIGLRVLDLETRKTTVLTTE-WDNL 570

Query: 440 PQWVG 444
           PQ+  
Sbjct: 571 PQFSP 575



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 98/280 (35%), Gaps = 41/280 (14%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR--DQIL 214
             +D   Q    E+     + L  S  V        L ++  D +   +++         
Sbjct: 402 RFTDVFPQVSHQERVAITQKQLGNSSIVTLNTTGGDLQLV-YDPSTADFVSDDETTGLSA 460

Query: 215 FEPRFSPNQQKVAYA---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--------- 262
           ++P +SP  + + +     ++  +    +++    + +   +    S  +          
Sbjct: 461 YQPSWSPCGEWLVFGVGFWFETREASGGWIVRATANGSYSEVLVNSSYSITEDGALNSGF 520

Query: 263 PRFSSNGKRALISVQKDEAMD--------IYSVDLQSNATERLTNTLFINISASYSPDSS 314
           P FS +GK+ +  V   +           +  +DL++  T  LT     +    +SPD  
Sbjct: 521 PSFSPDGKKVVYRVWGADTATYGNASEIGLRVLDLETRKTTVLTTE--WDNLPQFSPDGE 578

Query: 315 QIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA- 372
            I+F          +  ++ +G+D + ++    A+    VWS  G ++  T   G +F  
Sbjct: 579 LILFTRKTSTYNYDVCTIRPDGTDLRVLTSSG-ANDAHAVWSQDGRIMWSTGMYGFRFEC 637

Query: 373 ------------IGVMKKDGSQERLLVED-SNLQAPTWSP 399
                       + +M  DG  ++L+         P + P
Sbjct: 638 ALYGDTFQPYGQVMIMDADGGNKKLMTNSMWEDSMPLFLP 677



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 67/154 (43%), Gaps = 23/154 (14%)

Query: 313 SSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSG 368
             + VF  +R   G  +LY+  ++GS+++ +  +    Y    +SP  + I FT  +   
Sbjct: 64  GQKGVFMMNRIAPGTSELYIANTDGSNERPLLSNPVYEYHA-SFSPDVEWITFTSERNGD 122

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGR 426
               I  ++ +GS  + LV    ++ +   SP+GR   +    + +  + ++ +DL  G 
Sbjct: 123 GNSDIYRVRTNGSDLQELVATPAVEDSVVISPNGRLAAYVSTAN-NMKANIWILDLQTGA 181

Query: 427 NETLINTP---------------AYASDPQWVGF 445
              L NTP               A++ D +W+ F
Sbjct: 182 QWNLTNTPTTAANSSLMESYLRPAWSPDGEWIAF 215


>gi|171685532|ref|XP_001907707.1| hypothetical protein [Podospora anserina S mat+]
 gi|170942727|emb|CAP68380.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1354

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 78/227 (34%), Gaps = 16/227 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG +  ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 978  QRVASGSVDKTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDK----TIKI 1033

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +   R  + +  FS +G+R   S   DE + I+  D  S    + L   
Sbjct: 1034 WDAASGTCTQTLEGHRGTVRSVAFSPDGQRVA-SGSVDETIKIW--DAASGTCTQTLEGH 1090

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   S       + +  +      +  +      +   +SP G  
Sbjct: 1091 RGSVRSVAFSPDGQRVASGSV---DNTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQR 1147

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
            +A          I +           +E     + +  +SP G+ + 
Sbjct: 1148 VASGSVDET---IKIWDAASGTCTQTLEGHRGTVWSVAFSPDGQRVA 1191



 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 79/227 (34%), Gaps = 16/227 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG +  ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 936  QRVASGSVDKTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDK----TIKI 991

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +   R  + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 992  WDAASGTCTQTLEGHRGPVWSVAFSPDGQRVA-SGSVDKTIKIW--DAASGTCTQTLEGH 1048

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   S     E + +  +      +  +    S     +SP G  
Sbjct: 1049 RGTVRSVAFSPDGQRVASGSV---DETIKIWDAASGTCTQTLEGHRGSVRSVAFSPDGQR 1105

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
            +A          I +           +E     + +  +SP G+ + 
Sbjct: 1106 VASGSVDNT---IKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVA 1149



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 90/266 (33%), Gaps = 19/266 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG   N++ + D                ++   FSP+ Q+VA  + D+     + +
Sbjct: 852  QRVASGSDDNTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSDDN----TIKI 907

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +   R  +L+  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 908  WDAASGTCTQTLEGHRGPVLSVAFSPDGQRVA-SGSVDKTIKIW--DAASGTCTQTLEGH 964

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   S     + + +  +      +  +      +   +SP G  
Sbjct: 965  RGPVWSVAFSPDGQRVASGSV---DKTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQR 1021

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A          I +           +E     +++  +SP G+ +        D   K+
Sbjct: 1022 VASGSVDKT---IKIWDAASGTCTQTLEGHRGTVRSVAFSPDGQRVA---SGSVDETIKI 1075

Query: 419  YSIDLNGRNETLINTPAYASDPQWVG 444
            +        +TL           +  
Sbjct: 1076 WDAASGTCTQTLEGHRGSVRSVAFSP 1101



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 104/311 (33%), Gaps = 35/311 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDR---KQIIGKK-----FFSSPASWRKIAHTISDDI------ 162
             +     +    ++WD       + + G +        SP   R  + ++   I      
Sbjct: 936  QRVASGSVDKTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDKTIKIWDAA 995

Query: 163  ----YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                 Q++ G +G   S       + V SG +  ++ + D                +   
Sbjct: 996  SGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDKTIKIWDAASGTCTQTLEGHRGTVRSV 1055

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ Q+VA  + D+     + + D       + +   R  + +  FS +G+R   S  
Sbjct: 1056 AFSPDGQRVASGSVDE----TIKIWDAASGTCTQTLEGHRGSVRSVAFSPDGQRVA-SGS 1110

Query: 278  KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  + I+  D  S    + L        S ++SPD  ++   S     E + +  +   
Sbjct: 1111 VDNTIKIW--DAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSV---DETIKIWDAASG 1165

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
               +  +    + +   +SP G  +A          I +           +E    ++ +
Sbjct: 1166 TCTQTLEGHRGTVWSVAFSPDGQRVASGSVDKT---IKIWDAASGTCTQTLEGHRGSVLS 1222

Query: 395  PTWSPSGRSLI 405
              +SP G+ + 
Sbjct: 1223 VAFSPDGQRVA 1233



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 90/278 (32%), Gaps = 24/278 (8%)

Query: 137  KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
             Q+ G +         + A +    I ++        ++ +     S++  I K      
Sbjct: 761  GQLQGLRLKVIIQDAHRFAQSYGQIIQRAPLQV--YLSALVFAPIGSLIKNIFKEEKPGW 818

Query: 197  DRDGANIRYL------TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
               G+                  +    FSP+ Q+VA  + D+     + + D       
Sbjct: 819  LSTGSVEMQWNACTQTLEGHRGPVRSVAFSPDGQRVASGSDDN----TIKIWDAASGTCT 874

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASY 309
            + +   R  + +  FS +G+R   S   D  + I+  D  S    + L       +S ++
Sbjct: 875  QTLEGHRGPVWSVAFSPDGQRVA-SGSDDNTIKIW--DAASGTCTQTLEGHRGPVLSVAF 931

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            SPD  ++   S     + + +  +      +  +      +   +SP G  +A       
Sbjct: 932  SPDGQRVASGSV---DKTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDKT 988

Query: 370  KFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
               I +           +E     + +  +SP G+ + 
Sbjct: 989  ---IKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVA 1023



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 94/292 (32%), Gaps = 33/292 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDR---KQIIGKK-----FFSSPASWRKIAHTISDDI------ 162
             +     +    ++WD       + + G +        SP   R  + ++   I      
Sbjct: 978  QRVASGSVDKTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDKTIKIWDAA 1037

Query: 163  ----YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                 Q++ G +G   S       + V SG +  ++ + D                +   
Sbjct: 1038 SGTCTQTLEGHRGTVRSVAFSPDGQRVASGSVDETIKIWDAASGTCTQTLEGHRGSVRSV 1097

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ Q+VA  + D+     + + D       + +   R  + +  FS +G+R   S  
Sbjct: 1098 AFSPDGQRVASGSVDN----TIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVA-SGS 1152

Query: 278  KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             DE + I+  D  S    + L        S ++SPD  ++   S     + + +  +   
Sbjct: 1153 VDETIKIW--DAASGTCTQTLEGHRGTVWSVAFSPDGQRVASGSV---DKTIKIWDAASG 1207

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +  +    S     +SP G  +A          I +           + 
Sbjct: 1208 TCTQTLEGHRGSVLSVAFSPDGQRVASGSVDKT---IKIWDAASGTYTQTIN 1256



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 73/229 (31%), Gaps = 20/229 (8%)

Query: 219  FSPNQQKV-AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P    +      +    L    ++ + +   + +   R  + +  FS +G+R   S  
Sbjct: 800  FAPIGSLIKNIFKEEKPGWLSTGSVEMQWNACTQTLEGHRGPVRSVAFSPDGQRVA-SGS 858

Query: 278  KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  + I+  D  S    + L        S ++SPD  ++   SD      + +  +   
Sbjct: 859  DDNTIKIW--DAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSD---DNTIKIWDAASG 913

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
               +  +          +SP G  +A          I +           +E     + +
Sbjct: 914  TCTQTLEGHRGPVLSVAFSPDGQRVASGSVDKT---IKIWDAASGTCTQTLEGHRGPVWS 970

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              +SP G+ +        D   K++    +  + T   T      P W 
Sbjct: 971  VAFSPDGQRVA---SGSVDKTIKIW----DAASGTCTQTLEGHRGPVWS 1012



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 76/219 (34%), Gaps = 26/219 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDR---KQIIG-----KKFFSSPASWRKIAHTISDDI------ 162
             +     +    ++WD       + + G     +    SP   R  + ++ + I      
Sbjct: 1062 QRVASGSVDETIKIWDAASGTCTQTLEGHRGSVRSVAFSPDGQRVASGSVDNTIKIWDAA 1121

Query: 163  ----YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                 Q++ G +G   S       + V SG +  ++ + D                ++  
Sbjct: 1122 SGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDETIKIWDAASGTCTQTLEGHRGTVWSV 1181

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ Q+VA  + D      + + D       + +   R  +L+  FS +G+R   S  
Sbjct: 1182 AFSPDGQRVASGSVDK----TIKIWDAASGTCTQTLEGHRGSVLSVAFSPDGQRVA-SGS 1236

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             D+ + I+  D  S    +  N        S+   ++ I
Sbjct: 1237 VDKTIKIW--DAASGTYTQTINIGSTTTHLSFDHTNTYI 1273


>gi|154936832|emb|CAL30201.1| HNWD3 [Podospora anserina]
          Length = 1346

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 78/227 (34%), Gaps = 16/227 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG +  ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 970  QRVASGSVDKTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDK----TIKI 1025

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +   R  + +  FS +G+R   S   DE + I+  D  S    + L   
Sbjct: 1026 WDAASGTCTQTLEGHRGTVRSVAFSPDGQRVA-SGSVDETIKIW--DAASGTCTQTLEGH 1082

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   S       + +  +      +  +      +   +SP G  
Sbjct: 1083 RGSVRSVAFSPDGQRVASGSV---DNTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQR 1139

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
            +A          I +           +E     + +  +SP G+ + 
Sbjct: 1140 VASGSVDET---IKIWDAASGTCTQTLEGHRGTVWSVAFSPDGQRVA 1183



 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 79/227 (34%), Gaps = 16/227 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG +  ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 928  QRVASGSVDKTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDK----TIKI 983

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +   R  + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 984  WDAASGTCTQTLEGHRGPVWSVAFSPDGQRVA-SGSVDKTIKIW--DAASGTCTQTLEGH 1040

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   S     E + +  +      +  +    S     +SP G  
Sbjct: 1041 RGTVRSVAFSPDGQRVASGSV---DETIKIWDAASGTCTQTLEGHRGSVRSVAFSPDGQR 1097

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
            +A          I +           +E     + +  +SP G+ + 
Sbjct: 1098 VASGSVDNT---IKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVA 1141



 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 90/266 (33%), Gaps = 19/266 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V SG   N++ + D                ++   FSP+ Q+VA  + D+     + +
Sbjct: 844  QRVASGSDDNTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSDDN----TIKI 899

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +   R  +L+  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 900  WDAASGTCTQTLEGHRGPVLSVAFSPDGQRVA-SGSVDKTIKIW--DAASGTCTQTLEGH 956

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD  ++   S     + + +  +      +  +      +   +SP G  
Sbjct: 957  RGPVWSVAFSPDGQRVASGSV---DKTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQR 1013

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A          I +           +E     +++  +SP G+ +        D   K+
Sbjct: 1014 VASGSVDKT---IKIWDAASGTCTQTLEGHRGTVRSVAFSPDGQRVA---SGSVDETIKI 1067

Query: 419  YSIDLNGRNETLINTPAYASDPQWVG 444
            +        +TL           +  
Sbjct: 1068 WDAASGTCTQTLEGHRGSVRSVAFSP 1093



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 104/311 (33%), Gaps = 35/311 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDR---KQIIGKK-----FFSSPASWRKIAHTISDDI------ 162
             +     +    ++WD       + + G +        SP   R  + ++   I      
Sbjct: 928  QRVASGSVDKTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDKTIKIWDAA 987

Query: 163  ----YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                 Q++ G +G   S       + V SG +  ++ + D                +   
Sbjct: 988  SGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDKTIKIWDAASGTCTQTLEGHRGTVRSV 1047

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ Q+VA  + D+     + + D       + +   R  + +  FS +G+R   S  
Sbjct: 1048 AFSPDGQRVASGSVDE----TIKIWDAASGTCTQTLEGHRGSVRSVAFSPDGQRVA-SGS 1102

Query: 278  KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  + I+  D  S    + L        S ++SPD  ++   S     E + +  +   
Sbjct: 1103 VDNTIKIW--DAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSV---DETIKIWDAASG 1157

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
               +  +    + +   +SP G  +A          I +           +E    ++ +
Sbjct: 1158 TCTQTLEGHRGTVWSVAFSPDGQRVASGSVDKT---IKIWDAASGTCTQTLEGHRGSVLS 1214

Query: 395  PTWSPSGRSLI 405
              +SP G+ + 
Sbjct: 1215 VAFSPDGQRVA 1225



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 70/204 (34%), Gaps = 16/204 (7%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                     +    FSP+ Q+VA  + D+     + + D       + +   R  + +  
Sbjct: 825  QTLEGHRGPVRSVAFSPDGQRVASGSDDN----TIKIWDAASGTCTQTLEGHRGPVWSVA 880

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G+R   S   D  + I+  D  S    + L       +S ++SPD  ++   S   
Sbjct: 881  FSPDGQRVA-SGSDDNTIKIW--DAASGTCTQTLEGHRGPVLSVAFSPDGQRVASGSV-- 935

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              + + +  +      +  +      +   +SP G  +A          I +        
Sbjct: 936  -DKTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDKT---IKIWDAASGTC 991

Query: 384  RLLVED--SNLQAPTWSPSGRSLI 405
               +E     + +  +SP G+ + 
Sbjct: 992  TQTLEGHRGPVWSVAFSPDGQRVA 1015



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 94/292 (32%), Gaps = 33/292 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDR---KQIIGKK-----FFSSPASWRKIAHTISDDI------ 162
             +     +    ++WD       + + G +        SP   R  + ++   I      
Sbjct: 970  QRVASGSVDKTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDKTIKIWDAA 1029

Query: 163  ----YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                 Q++ G +G   S       + V SG +  ++ + D                +   
Sbjct: 1030 SGTCTQTLEGHRGTVRSVAFSPDGQRVASGSVDETIKIWDAASGTCTQTLEGHRGSVRSV 1089

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ Q+VA  + D+     + + D       + +   R  + +  FS +G+R   S  
Sbjct: 1090 AFSPDGQRVASGSVDN----TIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVA-SGS 1144

Query: 278  KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             DE + I+  D  S    + L        S ++SPD  ++   S     + + +  +   
Sbjct: 1145 VDETIKIW--DAASGTCTQTLEGHRGTVWSVAFSPDGQRVASGSV---DKTIKIWDAASG 1199

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +  +    S     +SP G  +A          I +           + 
Sbjct: 1200 TCTQTLEGHRGSVLSVAFSPDGQRVASGSVDKT---IKIWDAASGTYTQTIN 1248



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 73/229 (31%), Gaps = 20/229 (8%)

Query: 219  FSPNQQKV-AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P    +      +    L    ++ + +   + +   R  + +  FS +G+R   S  
Sbjct: 792  FAPIGSLIKNIFKEEKPGWLSTGSVEMQWNACTQTLEGHRGPVRSVAFSPDGQRVA-SGS 850

Query: 278  KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  + I+  D  S    + L        S ++SPD  ++   SD      + +  +   
Sbjct: 851  DDNTIKIW--DAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSD---DNTIKIWDAASG 905

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
               +  +          +SP G  +A          I +           +E     + +
Sbjct: 906  TCTQTLEGHRGPVLSVAFSPDGQRVASGSVDKT---IKIWDAASGTCTQTLEGHRGPVWS 962

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              +SP G+ +        D   K++    +  + T   T      P W 
Sbjct: 963  VAFSPDGQRVA---SGSVDKTIKIW----DAASGTCTQTLEGHRGPVWS 1004



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 76/219 (34%), Gaps = 26/219 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDR---KQIIG-----KKFFSSPASWRKIAHTISDDI------ 162
             +     +    ++WD       + + G     +    SP   R  + ++ + I      
Sbjct: 1054 QRVASGSVDETIKIWDAASGTCTQTLEGHRGSVRSVAFSPDGQRVASGSVDNTIKIWDAA 1113

Query: 163  ----YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                 Q++ G +G   S       + V SG +  ++ + D                ++  
Sbjct: 1114 SGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDETIKIWDAASGTCTQTLEGHRGTVWSV 1173

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ Q+VA  + D      + + D       + +   R  +L+  FS +G+R   S  
Sbjct: 1174 AFSPDGQRVASGSVDK----TIKIWDAASGTCTQTLEGHRGSVLSVAFSPDGQRVA-SGS 1228

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             D+ + I+  D  S    +  N        S+   ++ I
Sbjct: 1229 VDKTIKIW--DAASGTYTQTINIGSTTTHLSFDHTNTYI 1265


>gi|89097995|ref|ZP_01170881.1| YuxL [Bacillus sp. NRRL B-14911]
 gi|89087158|gb|EAR66273.1| YuxL [Bacillus sp. NRRL B-14911]
          Length = 663

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 83/239 (34%), Gaps = 51/239 (21%)

Query: 216 EPRFSPNQQKVAYAT---YDDEDILR--VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +P+ +PN +   Y      +++D     +Y ++T    AP +         +PR+S +G+
Sbjct: 22  DPQLAPNGKDCVYTETVILEEKDAYSSNLYYINTEDQSAPVQWTFGTWRNHSPRWSHDGR 81

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---------SD 321
           +      +     I+ +        +LT       +  +SPD S+I F          +D
Sbjct: 82  QVAFVSNRSGKNQIHILSAAGGEARQLTYCKNGAGNPVWSPDGSRIAFTVSLGEGESVND 141

Query: 322 REGKE-----------------------------QLYVMQSNGSDQKRISQDKEASYFDP 352
           REG E                              + +  ++  + ++++ + E  Y   
Sbjct: 142 REGGEEKDEKPAPLEVNKMRYKSDAQGFWNGKFTHIAIADTDTGNIEQVT-EGENDYSLQ 200

Query: 353 VWSPQGDLIAFTKFSGE------KFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSL 404
            WSP G  +A T                ++  +   QE++          TWSP  R L
Sbjct: 201 SWSPDGKHLAVTADLSGDKDFSYGSDAYLINLETKEQEKITQGTGYFGNITWSPDSRYL 259



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 87/301 (28%), Gaps = 69/301 (22%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V          N   +   D +     T    +    PR+S + ++VA+ +         
Sbjct: 38  VILEEKDAYSSNLYYINTEDQSAPVQWTFGTWR-NHSPRWSHDGRQVAFVSNRSGKNQIH 96

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA------------------ 281
            L  +      +++   ++    P +S +G R   +V   E                   
Sbjct: 97  IL--SAAGGEARQLTYCKNGAGNPVWSPDGSRIAFTVSLGEGESVNDREGGEEKDEKPAP 154

Query: 282 --------------------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
                                 I   D  +   E++T         S+SPD   +   +D
Sbjct: 155 LEVNKMRYKSDAQGFWNGKFTHIAIADTDTGNIEQVTEGENDYSLQSWSPDGKHLAVTAD 214

Query: 322 REGKEQL------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----SGEK 370
             G +        Y++     +Q++I+Q     + +  WSP    +          +   
Sbjct: 215 LSGDKDFSYGSDAYLINLETKEQEKITQGT-GYFGNITWSPDSRYLGLIGHEREFENATL 273

Query: 371 FAIGVMKKDGSQERLLVEDSN--------------LQAPT--WSPSGRSLIFSRKKDGDT 414
               V  ++  + R L  D++                +P   WS   RS  F    +G T
Sbjct: 274 SKAWVYDREQRELRCLTADTDLLIGDYAIGDFQQGAVSPGLLWSNDNRSFYFIATDNGST 333

Query: 415 G 415
            
Sbjct: 334 A 334



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 82/281 (29%), Gaps = 73/281 (25%)

Query: 165 SITGEKGDFNSR-ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                +   + R + FVS        KN + ++   G   R LT  ++     P +SP+ 
Sbjct: 70  RNHSPRWSHDGRQVAFVSNR----SGKNQIHILSAAGGEARQLTYCKNG-AGNPVWSPDG 124

Query: 224 QKVAYAT-------------------------------------YDDEDILRVYLMDTRI 246
            ++A+                                       + +     + + DT  
Sbjct: 125 SRIAFTVSLGEGESVNDREGGEEKDEKPAPLEVNKMRYKSDAQGFWNGKFTHIAIADTDT 184

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNT 300
               +++    +      +S +GK   ++             D Y ++L++   E++T  
Sbjct: 185 G-NIEQVTEGENDYSLQSWSPDGKHLAVTADLSGDKDFSYGSDAYLINLETKEQEKITQG 243

Query: 301 LFINISASYSPD-------SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                + ++SPD         +  FE+      + +V      + + ++ D +    D  
Sbjct: 244 TGYFGNITWSPDSRYLGLIGHEREFEN--ATLSKAWVYDREQRELRCLTADTDLLIGDYA 301

Query: 354 --------------WSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                         WS       F        A+     +G
Sbjct: 302 IGDFQQGAVSPGLLWSNDNRSFYFIATDNGSTAVYYGTVEG 342



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 65/221 (29%), Gaps = 28/221 (12%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-----ILRVYLMDTRID 247
           + + D D  NI  +T   +    +  +SP+ + +A       D         YL++    
Sbjct: 177 IAIADTDTGNIEQVTEGENDYSLQ-SWSPDGKHLAVTADLSGDKDFSYGSDAYLINLET- 234

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRA-LISVQKDEA----MDIYSVDLQSNATERLTNTLF 302
           +  ++I           +S + +   LI  +++         +  D +      LT    
Sbjct: 235 KEQEKITQGTGYFGNITWSPDSRYLGLIGHEREFENATLSKAWVYDREQRELRCLTADTD 294

Query: 303 I-------------NISA--SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +              +S    +S D+    F +   G   +Y     G     +  D++ 
Sbjct: 295 LLIGDYAIGDFQQGAVSPGLLWSNDNRSFYFIATDNGSTAVYYGTVEGELFPALL-DRQH 353

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            Y           +           + +++    +   L  
Sbjct: 354 VYGLSTGGNNDRAVVAISKPDHPGDLFLLEITTGKLEQLTA 394


>gi|295133107|ref|YP_003583783.1| peptidase [Zunongwangia profunda SM-A87]
 gi|294981122|gb|ADF51587.1| putative exported peptidase [Zunongwangia profunda SM-A87]
          Length = 1078

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 85/249 (34%), Gaps = 37/249 (14%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             + L  P  SPN + + +      ++ RV    +        I    +  + P +S +G
Sbjct: 22  NAKWLRYPSISPNGETIVFGYM--GNLYRV----SSDGGVAIAITTGDAYDMRPVWSHDG 75

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---- 325
           K    +  +    D+Y++        RLT     +    +SP   ++++ S R       
Sbjct: 76  KSIAFASDRYGNFDVYTMPATGGTPTRLTYNSANDFPYDFSPQDDKVLYGSGRNAPASSV 135

Query: 326 --------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TK 365
                   + LY +   G   + ++    A   +  +S  G  + F              
Sbjct: 136 RFPSPGLFQNLYTIPIKGGRPELLTA---AGAEEAHFSKDGTHLVFQDRKGYEDAWRKHH 192

Query: 366 FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL- 423
            S     I +   +    + +   +   + P +S  G  + +  +KDG     LY  +L 
Sbjct: 193 TSAVTRDIWLYDLENDSYKQISNFEGEDREPVFSADGTKVFYLNEKDGTQ--NLYVKNLS 250

Query: 424 NGRNETLIN 432
           +G  E L N
Sbjct: 251 SGSEEKLTN 259



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 70/205 (34%), Gaps = 29/205 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S NG+  +         ++Y V         +T     ++   +S D   I F SDR
Sbjct: 29  PSISPNGETIVF----GYMGNLYRVSSDGGVAIAITTGDAYDMRPVWSHDGKSIAFASDR 84

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-----------EKF 371
            G   +Y M + G    R++ +  A+ F   +SPQ D + +                  F
Sbjct: 85  YGNFDVYTMPATGGTPTRLTYNS-ANDFPYDFSPQDDKVLYGSGRNAPASSVRFPSPGLF 143

Query: 372 -AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYS 420
             +  +   G +  LL      +A  +S  G  L+F  +K                 ++ 
Sbjct: 144 QNLYTIPIKGGRPELLTAAGAEEA-HFSKDGTHLVFQDRKGYEDAWRKHHTSAVTRDIWL 202

Query: 421 IDL-NGRNETLINTPAYASDPQWVG 444
            DL N   + + N      +P +  
Sbjct: 203 YDLENDSYKQISNFEGEDREPVFSA 227



 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 67/267 (25%), Positives = 102/267 (38%), Gaps = 36/267 (13%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILR- 238
           S    S  +  +L  +   G     LT +  +      FS +   + +      ED  R 
Sbjct: 134 SVRFPSPGLFQNLYTIPIKGGRPELLTAAGAEEAH---FSKDGTHLVFQDRKGYEDAWRK 190

Query: 239 ---------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                    ++L D   D   K+I NF      P FS++G +     +KD   ++Y  +L
Sbjct: 191 HHTSAVTRDIWLYDLENDSY-KQISNFEGEDREPVFSADGTKVFYLNEKDGTQNLYVKNL 249

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--------- 340
            S + E+LTN     +      DS ++ F      K ++Y M      +K          
Sbjct: 250 SSGSEEKLTNFKDFPVRHLSISDSDKLAFT----WKGEVYTMTPGTQPKKLEIKVLDDAA 305

Query: 341 ---ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              I      S  +   SP    IAF    GE F  GV   D   +R+    +  +  +W
Sbjct: 306 FEAIKNMDINSVTEFAVSPNNKEIAFVNR-GEVFVTGV--DDSRTKRITNTSTQERMVSW 362

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           SPSG+ LIFS +KDG     +Y   LN
Sbjct: 363 SPSGKELIFSGEKDGSW--NVYKATLN 387



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 89/265 (33%), Gaps = 41/265 (15%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L  +  DG     +T   D     P +S + + +A+A+    +   VY M       P R
Sbjct: 46  LYRVSSDGGVAIAITTG-DAYDMRPVWSHDGKSIAFASDRYGN-FDVYTM-PATGGTPTR 102

Query: 253 IGNFRSMILAPRFSSNGKRALISV------------QKDEAMDIYSVDLQSNATERLTNT 300
           +    +      FS    + L                     ++Y++ ++    E LT  
Sbjct: 103 LTYNSANDFPYDFSPQDDKVLYGSGRNAPASSVRFPSPGLFQNLYTIPIKGGRPELLTAA 162

Query: 301 LFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQDKEA 347
                 A +S D + +VF+ DR+G                +++        K+IS + E 
Sbjct: 163 GAE--EAHFSKDGTHLVFQ-DRKGYEDAWRKHHTSAVTRDIWLYDLENDSYKQIS-NFEG 218

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
              +PV+S  G  + +         + V       E  L    D  ++  + S     L 
Sbjct: 219 EDREPVFSADGTKVFYLNEKDGTQNLYVKNLSSGSEEKLTNFKDFPVRHLSIS-DSDKLA 277

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETL 430
           F+         ++Y++    + + L
Sbjct: 278 FT------WKGEVYTMTPGTQPKKL 296



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/253 (19%), Positives = 88/253 (34%), Gaps = 29/253 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             ++  G     L +   D A    +       + E   SPN +++A+    +       
Sbjct: 284 VYTMTPGTQPKKLEIKVLDDAAFEAIKNMDINSVTEFAVSPNNKEIAFVNRGE------V 337

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT------ 294
            +    D   KRI N  +      +S +GK  + S +KD + ++Y   L           
Sbjct: 338 FVTGVDDSRTKRITNTSTQERMVSWSPSGKELIFSGEKDGSWNVYKATLNRPQEEYFYAS 397

Query: 295 -----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-- 347
                E L NT      A  SPDSS+I F  +R     L VM      +  I  +     
Sbjct: 398 TIVDIEPLINTTAEEFQAKISPDSSKIAFIEER---NILKVMDLKSGKKTVILPEGRNHS 454

Query: 348 ---SYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQE--RLLVEDSNLQAPTWSPS 400
                +   WSP    +      G  F   + ++K +G+ E    +          W+  
Sbjct: 455 YSDGDWSFQWSPDSRWLMVDDQKGYFFNNNVALIKANGNGEIFHPVNSGFGESNAKWAMD 514

Query: 401 GRSLIFSRKKDGD 413
           G+ + ++  ++G 
Sbjct: 515 GKMMTYTSSREGR 527



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 65/350 (18%), Positives = 121/350 (34%), Gaps = 50/350 (14%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTIS-----------DDIYQSITGEKGDFNSRILFVSE 182
           KD   ++ +       +WRK  HT +           +D Y+ I+  +G+    +     
Sbjct: 171 KDGTHLVFQDRKGYEDAWRKH-HTSAVTRDIWLYDLENDSYKQISNFEGEDREPVFSADG 229

Query: 183 SVV----SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT------YD 232
           + V          +L V +    +   LT  +D  +     S +  K+A+          
Sbjct: 230 TKVFYLNEKDGTQNLYVKNLSSGSEEKLTNFKDFPVRHLSIS-DSDKLAFTWKGEVYTMT 288

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                +   +    D A + I N   + +     S N K            +++   +  
Sbjct: 289 PGTQPKKLEIKVLDDAAFEAIKNMDINSVTEFAVSPNNKEIAFV----NRGEVFVTGVDD 344

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-------- 343
           + T+R+TNT       S+SP   +++F  +++G   +Y    N   ++            
Sbjct: 345 SRTKRITNTSTQERMVSWSPSGKELIFSGEKDGSWNVYKATLNRPQEEYFYASTIVDIEP 404

Query: 344 --DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSN------LQA 394
             +  A  F    SP    IAF +       + VM    G +  +L E  N        +
Sbjct: 405 LINTTAEEFQAKISPDSSKIAFIEERN---ILKVMDLKSGKKTVILPEGRNHSYSDGDWS 461

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET--LINTPAYASDPQW 442
             WSP  R L+   +K     + +  I  NG  E    +N+    S+ +W
Sbjct: 462 FQWSPDSRWLMVDDQKGYFFNNNVALIKANGNGEIFHPVNSGFGESNAKW 511



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 54/122 (44%), Gaps = 12/122 (9%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-----ILAPRFSSNG 269
           F+ + SP+  K+A+   ++ +IL+V  MD +  +    +   R+        + ++S + 
Sbjct: 413 FQAKISPDSSKIAF--IEERNILKV--MDLKSGKKTVILPEGRNHSYSDGDWSFQWSPDS 468

Query: 270 KRALISVQKD--EAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +  ++  QK      ++  +            N+ F   +A ++ D   + + S REG++
Sbjct: 469 RWLMVDDQKGYFFNNNVALIKANGNGEIFHPVNSGFGESNAKWAMDGKMMTYTSSREGRK 528

Query: 327 QL 328
            L
Sbjct: 529 SL 530


>gi|116626609|ref|YP_828765.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229771|gb|ABJ88480.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 879

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 63/369 (17%), Positives = 131/369 (35%), Gaps = 48/369 (13%)

Query: 69  VSKDLQ-RSDVFNLISQDSFKQKITNPDSIPRFQ-DWNSL--GAQVLV-TGRVIKEGKDR 123
           +  +L     +F +       Q +T+P +       W  +  G + ++ TG       D 
Sbjct: 420 IVANLTLGGGLFRVPDGGGSPQALTDPAATSEATHRWPQVLPGGRAVLFTGHATTANYDE 479

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
             +E    +    K +    +       R +                      +L+V++S
Sbjct: 480 ANIEVLSLETGKLKVVHRGGYHG-----RYVP------------------TGHLLYVNQS 516

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTP-SRDQILFEPRF-SPNQQKVAYATYDDEDILRVYL 241
            +   +  +L  ++  GA +  +   + ++     +F S N   V Y+         V  
Sbjct: 517 TL-YAVPFNLNRLEEQGAPVPMVGDIAGNRNNGAGQFDSRNGMLVYYSNRYAPKSWPVVW 575

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +D    +  + I         PR S +G R  ++V ++   DI   D Q     RLT   
Sbjct: 576 IDREGRQ--QVIPLDPGRYSQPRISPDGTRLAMTVGREGGSDIGIYDFQRQTMTRLTFAQ 633

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             N    ++PD   +VF ++      +  M+++G+ + R   + +       +SP G  +
Sbjct: 634 -NNSHPVWAPDGKHLVFLTETSRLLAIRWMRADGAGETRTLFEDKNELIPWSFSPDGQ-L 691

Query: 362 AFTKFS-GEKFAIGVMKKD---------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           AFT  +    + +  +  D         G    ++     +  P +SP GR + +   + 
Sbjct: 692 AFTWLAKDASYHLWTLPLDLRDLDNPKTGPPAAVVHTRFTVSHPAFSPDGRWIAY---RS 748

Query: 412 GDTGSKLYS 420
           G+    +Y 
Sbjct: 749 GEKPEGIYV 757



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 54/279 (19%), Positives = 100/279 (35%), Gaps = 32/279 (11%)

Query: 194 CVMDRDGANIRYLTPSRDQI------LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              + D ANI  L+    ++       +  R+ P    +         +           
Sbjct: 473 TTANYDEANIEVLSLETGKLKVVHRGGYHGRYVPTGHLLYVNQSTLYAVPFNLNRLEEQG 532

Query: 248 RAPKRIGNFRSM--ILAPRF-SSNGKRALISVQKDEAMDIYS-VDLQSNATERLTNTLFI 303
                +G+        A +F S NG     S +          +D +    + +      
Sbjct: 533 APVPMVGDIAGNRNNGAGQFDSRNGMLVYYSNRYAPKSWPVVWIDREGRQ-QVIPLDPGR 591

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                 SPD +++     REG   + +         R++  +  S+  PVW+P G  + F
Sbjct: 592 YSQPRISPDGTRLAMTVGREGGSDIGIYDFQRQTMTRLTFAQNNSH--PVWAPDGKHLVF 649

Query: 364 TKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +    AI  M+ DG  + R L ED N   P ++SP G+ L F+     D    L+++
Sbjct: 650 LTETSRLLAIRWMRADGAGETRTLFEDKNELIPWSFSPDGQ-LAFT-WLAKDASYHLWTL 707

Query: 422 DLN---------GRNETLINT------PAYASDPQWVGF 445
            L+         G    +++T      PA++ D +W+ +
Sbjct: 708 PLDLRDLDNPKTGPPAAVVHTRFTVSHPAFSPDGRWIAY 746



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 77/254 (30%), Gaps = 26/254 (10%)

Query: 193 LCVMDRDGANIRYLTP---SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           L  +   G + + LT    + +     P+  P  + V +  +          ++      
Sbjct: 430 LFRVPDGGGSPQALTDPAATSEATHRWPQVLPGGRAVLFTGHATTANYDEANIEVLSLET 489

Query: 250 PKRIGNFRSMILAPRFSSNGKRALI-------------SVQKDEAMDIYSVDLQSNATER 296
            K     R      R+   G    +              +++  A      D+  N    
Sbjct: 490 GKLKVVHRGGYHG-RYVPTGHLLYVNQSTLYAVPFNLNRLEEQGAPVPMVGDIAGNR--- 545

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                  N +  +   +  +V+ S+R   +   V+  +   ++++       Y  P  SP
Sbjct: 546 ------NNGAGQFDSRNGMLVYYSNRYAPKSWPVVWIDREGRQQVIPLDPGRYSQPRISP 599

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +A T        IG+          L    N   P W+P G+ L+F  +       
Sbjct: 600 DGTRLAMTVGREGGSDIGIYDFQRQTMTRLTFAQNNSHPVWAPDGKHLVFLTETSRLLAI 659

Query: 417 KLYSIDLNGRNETL 430
           +    D  G   TL
Sbjct: 660 RWMRADGAGETRTL 673



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 53/367 (14%), Positives = 103/367 (28%), Gaps = 77/367 (20%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RL D+ D   ++ +   + P S R++   +   +        G        +      G 
Sbjct: 253 RLRDIGDVGLLLEEGPPTIPVSRRRLGRAVVGTLALVSMALAG--------MLWRANRGE 304

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  +      G +   + PS  +I+     SP+    AY          +         
Sbjct: 305 PRPMIRFDADLGLDAVDMAPSGSEIV----ISPDGSLFAYTVRTQGGPNAIATRSLDQAE 360

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A    G        P FS +G+     +    A  +  + +       L +    +  AS
Sbjct: 361 AAVLRGTEGGNR--PFFSPDGQWLGFFI----AGQMKKISIHGGPVAMLCDAPG-SRGAS 413

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTK 365
           + PD   IV      G   L+ +   G   + ++     S     W    P G  + FT 
Sbjct: 414 WGPDG-YIVANLTLGGG--LFRVPDGGGSPQALTDPAATSEATHRWPQVLPGGRAVLFTG 470

Query: 366 F----SGEKFAIGVMKKDGSQERLLVEDSNLQ---------------------------- 393
                + ++  I V+  +  + +++                                   
Sbjct: 471 HATTANYDEANIEVLSLETGKLKVVHRGGYHGRYVPTGHLLYVNQSTLYAVPFNLNRLEE 530

Query: 394 ----APTW---------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                P                 S +G  L++   +       +  ID  GR + +   P
Sbjct: 531 QGAPVPMVGDIAGNRNNGAGQFDSRNG-MLVYYSNRYAPKSWPVVWIDREGRQQVIPLDP 589

Query: 435 AYASDPQ 441
              S P+
Sbjct: 590 GRYSQPR 596



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 7/93 (7%)

Query: 353 VWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           V SP G L A+T +  G   AI     D ++  +L        P +SP G+ L F     
Sbjct: 330 VISPDGSLFAYTVRTQGGPNAIATRSLDQAEAAVLRGTEGGNRPFFSPDGQWLGFF---- 385

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                ++  I ++G    ++     +    W  
Sbjct: 386 --IAGQMKKISIHGGPVAMLCDAPGSRGASWGP 416



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 13/117 (11%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  P FSP+ + +AY + +  + + V       +    +        + P +S  GK+  
Sbjct: 732 VSHPAFSPDGRWIAYRSGEKPEGIYVRRFPPGAEDDTSKWQVSVGGAV-PGWSRTGKQLF 790

Query: 274 I-------SVQKDEAMDIYSVDLQ---SNATERLTNTLFINISAS-YSPDSSQI-VF 318
                    V  D   D +SVD +   SN    +   L  +   S  +PD  +  VF
Sbjct: 791 YEKDGRFMVVNYDAGPDSFSVDKEREWSNEPLPMMMRLGGDAWPSDVAPDGKRFLVF 847


>gi|226226567|ref|YP_002760673.1| putative S9C family peptidase [Gemmatimonas aurantiaca T-27]
 gi|226089758|dbj|BAH38203.1| putative S9C family peptidase [Gemmatimonas aurantiaca T-27]
          Length = 685

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 69/239 (28%), Gaps = 49/239 (20%)

Query: 218 RFSPNQQKVAYATY--------------DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             SP+  +V Y                 D  D      M      A +++         P
Sbjct: 37  AISPDGARVLYTVTGWEHPAAKGDTALGDRHDRRSHVFMVPAAGGATRQLTYGERGESQP 96

Query: 264 RFSSNGKRALISVQKD-------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            +S +GK       +            I+ +        +L++         +SPD S+I
Sbjct: 97  TWSPDGKTVAFVASRGAGTGDDAPRAQIWLLPADGGEARQLSSLRDGVSGYVWSPDGSKI 156

Query: 317 VFESD----------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
              S                             ++V+        RI+         P W
Sbjct: 157 AVTSQDSISREDDAKRRRRDDAQVYEGPSRLSHIWVVDVATGAATRITTGNFTVNGVPSW 216

Query: 355 SPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFS 407
           SP G  +AF     T    E+    V+     Q   +  +  ++  P +SP G+ L F+
Sbjct: 217 SPDGARLAFQAGPTTLIRDERHDAYVVDVATKQLDRITSNGEVETTPQFSPDGKLLAFT 275



 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 58/296 (19%), Positives = 108/296 (36%), Gaps = 54/296 (18%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD----DEDILRV 239
                 ++ + ++   G   R LT   ++   +P +SP+ + VA+         +D  R 
Sbjct: 64  GDRHDRRSHVFMVPAAGGATRQLTYG-ERGESQPTWSPDGKTVAFVASRGAGTGDDAPRA 122

Query: 240 YLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------------- 277
            +     D    +++ + R  +    +S +G +  ++ Q                     
Sbjct: 123 QIWLLPADGGEARQLSSLRDGVSGYVWSPDGSKIAVTSQDSISREDDAKRRRRDDAQVYE 182

Query: 278 -KDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESD-----REGKEQLYV 330
                  I+ VD+ + A  R+T   F +N   S+SPD +++ F++      R+ +   YV
Sbjct: 183 GPSRLSHIWVVDVATGAATRITTGNFTVNGVPSWSPDGARLAFQAGPTTLIRDERHDAYV 242

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLV- 387
           +        RI+ + E     P +SP G L+AFT    E      G+  +     R+   
Sbjct: 243 VDVATKQLDRITSNGEVE-TTPQFSPDGKLLAFTVVPHEFAAHKDGIPPRTLRNGRVTTF 301

Query: 388 -----EDSNLQAP---------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                  +N   P          WSP G+ L F+          +YS D   +  T
Sbjct: 302 DLATRTSTNHARPDFDVSAGALRWSPDGKELWFTASD--RVYQSVYSYDFASKQYT 355



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/236 (18%), Positives = 80/236 (33%), Gaps = 52/236 (22%)

Query: 260 ILAPRFSSNGKRALISV----------------QKDEAMDIYSVDLQSNATERLTNTLFI 303
           +     S +G R L +V                + D    ++ V     AT +LT     
Sbjct: 33  VGGAAISPDGARVLYTVTGWEHPAAKGDTALGDRHDRRSHVFMVPAAGGATRQLTYGERG 92

Query: 304 NISASYSPDSSQIVFESDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
               ++SPD   + F + R         + Q++++ ++G + +++S  ++      VWSP
Sbjct: 93  ESQPTWSPDGKTVAFVASRGAGTGDDAPRAQIWLLPADGGEARQLSSLRDG-VSGYVWSP 151

Query: 357 QGDLIAFTKFS----------------------GEKFAIGVMK-KDGSQERLLVEDSNLQ 393
            G  IA T                              I V+    G+  R+   +  + 
Sbjct: 152 DGSKIAVTSQDSISREDDAKRRRRDDAQVYEGPSRLSHIWVVDVATGAATRITTGNFTVN 211

Query: 394 -APTWSPSGRSLIFSRKKD---GDTGSKLYSIDLNGRNETLINTPAYA-SDPQWVG 444
             P+WSP G  L F         D     Y +D+  +    I +     + PQ+  
Sbjct: 212 GVPSWSPDGARLAFQAGPTTLIRDERHDAYVVDVATKQLDRITSNGEVETTPQFSP 267



 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 105/308 (34%), Gaps = 47/308 (15%)

Query: 177 ILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD- 232
           + FV+           +  + ++  DG   R L+  RD +     +SP+  K+A  + D 
Sbjct: 105 VAFVASRGAGTGDDAPRAQIWLLPADGGEARQLSSLRDGVSGY-VWSPDGSKIAVTSQDS 163

Query: 233 --------------------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
                                  +  ++++D     A +      ++   P +S +G R 
Sbjct: 164 ISREDDAKRRRRDDAQVYEGPSRLSHIWVVDVATGAATRITTGNFTVNGVPSWSPDGARL 223

Query: 273 LI-----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------S 320
                  ++ +DE  D Y VD+ +   +R+T+   +  +  +SPD   + F        +
Sbjct: 224 AFQAGPTTLIRDERHDAYVVDVATKQLDRITSNGEVETTPQFSPDGKLLAFTVVPHEFAA 283

Query: 321 DREG-------KEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            ++G         ++        +       D + S     WSP G  + FT       +
Sbjct: 284 HKDGIPPRTLRNGRVTTFDLATRTSTNHARPDFDVSAGALRWSPDGKELWFTASDRVYQS 343

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431
           +        Q     +D  +   + +       F         S++Y  D  +G  + + 
Sbjct: 344 VYSYDFASKQYTKRTKDQLVAGLSHNRDASRFAFVLNTAA-WPSEVYVQDGFSGTPKRIT 402

Query: 432 NTPAYASD 439
           NT  + ++
Sbjct: 403 NTNPWIAE 410


>gi|124006957|ref|ZP_01691786.1| MdsD protein [Microscilla marina ATCC 23134]
 gi|123987410|gb|EAY27130.1| MdsD protein [Microscilla marina ATCC 23134]
          Length = 1083

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 80/249 (32%), Gaps = 39/249 (15%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             Q    P  SP+   + ++     D+ +V             +   +   + P +S +G
Sbjct: 15  SPQWTNTPAISPDGSTIVFSY--KGDLYKVPTQ----GGTATLLTLHKGHDMKPVWSKDG 68

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-- 327
           +       +    DIY +  +    +RLT     ++ +S++PD   ++F S R    Q  
Sbjct: 69  QSIAFMSDRYGNFDIYLISAKGGQAKRLTYHSSNDVPSSFTPDGKAVLFRSSRLDNAQNA 128

Query: 328 ---------LYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAF------------T 364
                    LY +   G    +I  +    A+Y        G ++ F             
Sbjct: 129 MFPSGAMSELYQVSLKGGKPTQILTTPALFANYDKT-----GKIMVFQDQKGYEDDRRKH 183

Query: 365 KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S     +       +    L         P  S  G+ +++   + G     ++ + L
Sbjct: 184 HTSSVTRDLWSYVPATNTFTQLTSFKGEDLNPVISEDGKMMVYLSAEKGS--INVFEMTL 241

Query: 424 NGRNETLIN 432
           + + +  + 
Sbjct: 242 SNQQKKPLT 250



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 82/222 (36%), Gaps = 25/222 (11%)

Query: 227 AYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            Y    +    +V +     DR  P+ I +          S NGK     V+     +I+
Sbjct: 276 IYTQTSNGSPQKVNIKIFSEDRHNPEEIVSVNRGATDLAISPNGKEVAFVVRG----EIF 331

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-- 343
           +  ++   T+R+TNT     + S+SPD   I++  +R G   LY       ++K      
Sbjct: 332 AASIEGGTTKRITNTPEQERNISFSPDGRSILYAGERNGSWNLYQTSLTRKEEKYFFSAT 391

Query: 344 --------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                   + +   FDP +SP G  +AF +       + V+     + R++V  +   + 
Sbjct: 392 ILKETPVLESKKETFDPKYSPDGKEVAFLEERTT---LRVINLASKKVRVIVPGNRNYSY 448

Query: 396 T-------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                   WSP G+  +           ++  +   G  + +
Sbjct: 449 VDGDQYYDWSPDGKWFLVDFLPRKQWIGEVGLVSSQGTKKPI 490



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 100/285 (35%), Gaps = 44/285 (15%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           N+  +    S +    K  L  +   G     LT  +     +P +S + Q +A+ +   
Sbjct: 20  NTPAISPDGSTIVFSYKGDLYKVPTQGGTATLLTLHKGH-DMKPVWSKDGQSIAFMSDRY 78

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---------- 283
            +   +YL+  +  +A KR+    S  +   F+ +GK  L    + +             
Sbjct: 79  GN-FDIYLISAKGGQA-KRLTYHSSNDVPSSFTPDGKAVLFRSSRLDNAQNAMFPSGAMS 136

Query: 284 -IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-------------KEQLY 329
            +Y V L+     ++  T  +   A+Y      +VF+ D++G                L+
Sbjct: 137 ELYQVSLKGGKPTQILTTPAL--FANYDKTGKIMVFQ-DQKGYEDDRRKHHTSSVTRDLW 193

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                 +   +++  K     +PV S  G ++ +         +  M     Q++ L + 
Sbjct: 194 SYVPATNTFTQLTSFK-GEDLNPVISEDGKMMVYLSAEKGSINVFEMTLSNQQKKPLTQ- 251

Query: 390 SNLQAPTWSPSGRSLIFSRKKDG----DTGSKLYSIDLNGRNETL 430
                P      R L  SR  +G        ++Y+   NG  + +
Sbjct: 252 -FKDHPV-----RDL--SRANNGTLCYRYAGEIYTQTSNGSPQKV 288



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 101/331 (30%), Gaps = 90/331 (27%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY------ 228
             I F+S+          + ++   G   + LT           F+P+ + V +      
Sbjct: 69  QSIAFMSDR----YGNFDIYLISAKGGQAKRLTYHSSN-DVPSSFTPDGKAVLFRSSRLD 123

Query: 229 ----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE---- 280
               A +    +  +Y +  +  +  + +       L   +   GK  +   QK      
Sbjct: 124 NAQNAMFPSGAMSELYQVSLKGGKPTQILTTP---ALFANYDKTGKIMVFQDQKGYEDDR 180

Query: 281 --------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                     D++S    +N   +LT+    +++   S D   +V+ S  +G   ++ M 
Sbjct: 181 RKHHTSSVTRDLWSYVPATNTFTQLTSFKGEDLNPVISEDGKMMVYLSAEKGSINVFEMT 240

Query: 333 SNGSDQKRISQDKEASYFDPVW---------------------SP--------------- 356
            +   +K ++Q K+    D                        SP               
Sbjct: 241 LSNQQKKPLTQFKDHPVRDLSRANNGTLCYRYAGEIYTQTSNGSPQKVNIKIFSEDRHNP 300

Query: 357 -----------------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWS 398
                             G  +AF         I     +G   + +      +   ++S
Sbjct: 301 EEIVSVNRGATDLAISPNGKEVAFVVRG----EIFAASIEGGTTKRITNTPEQERNISFS 356

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           P GRS++++ +++G     LY   L  + E 
Sbjct: 357 PDGRSILYAGERNGSW--NLYQTSLTRKEEK 385



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 69/199 (34%), Gaps = 24/199 (12%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR---- 245
           +  +     +G   + +T + +Q      FSP+ + + YA   +          TR    
Sbjct: 327 RGEIFAASIEGGTTKRITNTPEQ-ERNISFSPDGRSILYAGERNGSWNLYQTSLTRKEEK 385

Query: 246 -----IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--- 297
                       +   +     P++S +GK        +E   +  ++L S     +   
Sbjct: 386 YFFSATILKETPVLESKKETFDPKYSPDGKEVAF---LEERTTLRVINLASKKVRVIVPG 442

Query: 298 -TNTLFINISA--SYSPDSSQIV--FESDREGKEQLYVMQSNGS--DQKRISQDKEASYF 350
             N  +++      +SPD    +  F   ++   ++ ++ S G+    + +++    S  
Sbjct: 443 NRNYSYVDGDQYYDWSPDGKWFLVDFLPRKQWIGEVGLVSSQGTKKPIENLTKSG-YSDG 501

Query: 351 DPVWSPQGDLIAFTKFSGE 369
              W+  GD++ +      
Sbjct: 502 GGTWAMGGDMMFYYSDRHG 520



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 36/95 (37%), Gaps = 4/95 (4%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+    S + +   S +GK+     + ++  +++  +L++ +T+ L           +  
Sbjct: 604 RLTIHSSRLSSALVSKDGKKLYYMARFEKGYNLWETNLRTRSTKILAKLNSRGGGMRWDK 663

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D   I F     G   +  +      +KRI    E
Sbjct: 664 DQKNI-FLLASGG---ISKINPKSGKRKRIRFSGE 694


>gi|257067641|ref|YP_003153896.1| periplasmic component of the Tol biopolymer transport system
           [Brachybacterium faecium DSM 4810]
 gi|256558459|gb|ACU84306.1| periplasmic component of the Tol biopolymer transport system
           [Brachybacterium faecium DSM 4810]
          Length = 408

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 52/237 (21%), Positives = 89/237 (37%), Gaps = 28/237 (11%)

Query: 193 LCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L  +   G   + +       +  +   +P+ Q V Y + DD  I R  L         +
Sbjct: 170 LFRVPVGGGEPQQIDLGDLPDLNNDHVLAPDGQDV-YVSADDGRIHRAPLAGGETIPVTE 228

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQK---DEA---MDIYSVDLQSNATERLTNTLFINI 305
             G+          S +G        +   D       +++V     A   LT   F + 
Sbjct: 229 DDGHLH---FLHGVSPDGTTLAYIGVQRLEDGTWLPPKVFTVPSSGGAPTPLTEDEFPDD 285

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            A YSPD + I F S+R     G  QL+ M+ +GS  ++++ D+  ++F P  SP G  +
Sbjct: 286 GAEYSPDGAWIYFNSERARTVPGHAQLFRMRPDGSGVEQLTDDERVNWF-PHLSPDGRRV 344

Query: 362 AFTKFSGE--------KFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIF 406
           A+  F              + +   DG+  R LV        +   +W+P  R L +
Sbjct: 345 AYVSFPPGTLGHPADRDVILRLCAPDGTGIRDLVRLHGGQGTMNVNSWAPDSRRLAY 401



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 104/296 (35%), Gaps = 36/296 (12%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                ++   ++ + ++D +      +  S + +   P +S +   +      D  + RV
Sbjct: 116 PMPRSLAPGQRSRIHILDVETGQDVIVHDSAEVLYEAPNWSYDGDWLI--VNGDGHLFRV 173

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            +      +    +G+   +      + +G+   +S        I+   L    T  +T 
Sbjct: 174 PVGGGEPQQI--DLGDLPDLNNDHVLAPDGQDVYVSADDG---RIHRAPLAGGETIPVTE 228

Query: 300 TLF-INISASYSPDSSQIVF---ESDREGK---EQLYVMQSNGSDQKRISQDKEASYFDP 352
               ++     SPD + + +   +   +G     +++ + S+G     +++D+       
Sbjct: 229 DDGHLHFLHGVSPDGTTLAYIGVQRLEDGTWLPPKVFTVPSSGGAPTPLTEDEFPDDGAE 288

Query: 353 VWSPQGDLIAFTKFS----GEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFS 407
            +SP G  I F             +  M+ DGS    L +D      P  SP GR + + 
Sbjct: 289 -YSPDGAWIYFNSERARTVPGHAQLFRMRPDGSGVEQLTDDERVNWFPHLSPDGRRVAYV 347

Query: 408 RKKDGDTG--------SKLYSIDLNG--------RNETLINTPAYASDPQWVGFMD 447
               G  G         +L + D  G          +  +N  ++A D + + ++D
Sbjct: 348 SFPPGTLGHPADRDVILRLCAPDGTGIRDLVRLHGGQGTMNVNSWAPDSRRLAYVD 403


>gi|116200089|ref|XP_001225856.1| hypothetical protein CHGG_08200 [Chaetomium globosum CBS 148.51]
 gi|88179479|gb|EAQ86947.1| hypothetical protein CHGG_08200 [Chaetomium globosum CBS 148.51]
          Length = 1552

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 55/339 (16%), Positives = 112/339 (33%), Gaps = 38/339 (11%)

Query: 128  FRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISDD--------------IYQSITGEK 170
             RLWD       + + G   + S  ++    +T++                 ++      
Sbjct: 1061 IRLWDTATGAHRQTLEGHGHWVSAVAFSPDGNTLASASDDTTIRLWDTATGAHRQTLEGH 1120

Query: 171  GDFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            GD    + F   S ++ S     ++ + D      R         +    FSP+   +A 
Sbjct: 1121 GDSVRAVAFSPDSNTLASASDDKTIRLWDTATGAHRQTLEGHGHWVSAVAFSPDGNTLAS 1180

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            A+ D      + L DT      + +      + A  FS +G     S   D+ + ++  D
Sbjct: 1181 ASDDT----TIRLWDTATGAHRQTLEGHGDSVRAVAFSPDGNTLA-SASDDKTIRLW--D 1233

Query: 289  LQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
              + A  + L        + ++SPD + +   SD      + +  +     ++  +    
Sbjct: 1234 TATGAHRQTLEGHGHWVRAVAFSPDGNTLASASD---DTTIRLWDTATGAHRQTLEGHGD 1290

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
                  +SP G+ +A          I +     S  R  +E       A  +SP G +L 
Sbjct: 1291 WVNAVAFSPDGNTLASASRDKT---IRLWDTATSAHRQTLEGHGHWVRAVAFSPDGNTLA 1347

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             + +   D   +L+    +   +TL     + S   +  
Sbjct: 1348 SASR---DKTIRLWDTATSAHRQTLEGHGDWVSAVAFSP 1383



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 112/339 (33%), Gaps = 38/339 (11%)

Query: 128  FRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISDD--------------IYQSITGEK 170
             RLWD       + + G   + S  ++    +T++                 ++      
Sbjct: 1145 IRLWDTATGAHRQTLEGHGHWVSAVAFSPDGNTLASASDDTTIRLWDTATGAHRQTLEGH 1204

Query: 171  GDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            GD    + F     ++ S     ++ + D      R         +    FSP+   +A 
Sbjct: 1205 GDSVRAVAFSPDGNTLASASDDKTIRLWDTATGAHRQTLEGHGHWVRAVAFSPDGNTLAS 1264

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            A+ D      + L DT      + +      + A  FS +G     S  +D+ + ++  D
Sbjct: 1265 ASDDT----TIRLWDTATGAHRQTLEGHGDWVNAVAFSPDGNTLA-SASRDKTIRLW--D 1317

Query: 289  LQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
              ++A  + L        + ++SPD + +   S     + + +  +  S  ++  +    
Sbjct: 1318 TATSAHRQTLEGHGHWVRAVAFSPDGNTLASASR---DKTIRLWDTATSAHRQTLEGHGD 1374

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
                  +SP G+ +A          I +        R  +E       A  +SP G +L 
Sbjct: 1375 WVSAVAFSPDGNTLASASDDTT---IRLWDTATGAHRQTLEGHGDWVRAVAFSPDGNTLA 1431

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             +     DT  +L+        +TL     + S   +  
Sbjct: 1432 SASD---DTTIRLWDTATGAHRQTLEGHGDWVSAVAFSP 1467



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 94/280 (33%), Gaps = 22/280 (7%)

Query: 163  YQSITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            ++      GD+ S + F     ++ S     ++ + D      R         +    FS
Sbjct: 945  HRQTLEGHGDWVSAVAFSPDGNTLASTSDDKTIRLWDTATGAHRQTLEGHGHWVRAVAFS 1004

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+   +A A+ D      + L DT      + +      + A  FS +      S  +D+
Sbjct: 1005 PDGNTLASASDDK----TIRLWDTATGAHRQTLEGHGDSVRAVAFSPDSNTLA-SASRDK 1059

Query: 281  AMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             + ++  D  + A  + L        + ++SPD + +   SD      + +  +     +
Sbjct: 1060 TIRLW--DTATGAHRQTLEGHGHWVSAVAFSPDGNTLASASD---DTTIRLWDTATGAHR 1114

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTW 397
            +  +    S     +SP  + +A          I +        R  +E       A  +
Sbjct: 1115 QTLEGHGDSVRAVAFSPDSNTLASASDDKT---IRLWDTATGAHRQTLEGHGHWVSAVAF 1171

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            SP G +L  +     DT  +L+     G +   +     +
Sbjct: 1172 SPDGNTLASASD---DTTIRLWDT-ATGAHRQTLEGHGDS 1207



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 51/322 (15%), Positives = 99/322 (30%), Gaps = 46/322 (14%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS--ESVV 185
             RLWD                      AH              G +   + F     ++ 
Sbjct: 977  IRLWDTATG------------------AHR-------QTLEGHGHWVRAVAFSPDGNTLA 1011

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ + D      R         +    FSP+   +A A+ D      + L DT 
Sbjct: 1012 SASDDKTIRLWDTATGAHRQTLEGHGDSVRAVAFSPDSNTLASASRDK----TIRLWDTA 1067

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 + +      + A  FS +G     S   D  + ++  D  + A  +       ++
Sbjct: 1068 TGAHRQTLEGHGHWVSAVAFSPDGNTLA-SASDDTTIRLW--DTATGAHRQTLEGHGDSV 1124

Query: 306  SA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             A ++SPDS+ +   SD    + + +  +     ++  +          +SP G+ +A  
Sbjct: 1125 RAVAFSPDSNTLASASD---DKTIRLWDTATGAHRQTLEGHGHWVSAVAFSPDGNTLASA 1181

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    I +        R  +E      +A  +SP G +L  +     D   +L+   
Sbjct: 1182 SDDTT---IRLWDTATGAHRQTLEGHGDSVRAVAFSPDGNTLASASD---DKTIRLWDTA 1235

Query: 423  LNGRNETLINTPAYASDPQWVG 444
                 +TL     +     +  
Sbjct: 1236 TGAHRQTLEGHGHWVRAVAFSP 1257



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 98/302 (32%), Gaps = 36/302 (11%)

Query: 128  FRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISDD--------------IYQSITGEK 170
             RLWD       + + G   +    ++    +T++                 ++      
Sbjct: 1229 IRLWDTATGAHRQTLEGHGHWVRAVAFSPDGNTLASASDDTTIRLWDTATGAHRQTLEGH 1288

Query: 171  GDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            GD+ + + F     ++ S     ++ + D   +  R         +    FSP+   +A 
Sbjct: 1289 GDWVNAVAFSPDGNTLASASRDKTIRLWDTATSAHRQTLEGHGHWVRAVAFSPDGNTLAS 1348

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            A+ D      + L DT      + +      + A  FS +G     S   D  + ++  D
Sbjct: 1349 ASRDK----TIRLWDTATSAHRQTLEGHGDWVSAVAFSPDGNTLA-SASDDTTIRLW--D 1401

Query: 289  LQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
              + A  + L        + ++SPD + +   SD      + +  +     ++  +    
Sbjct: 1402 TATGAHRQTLEGHGDWVRAVAFSPDGNTLASASD---DTTIRLWDTATGAHRQTLEGHGD 1458

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMK--KDGSQERLLVEDSNLQAPTW-SPSGRSL 404
                  +SP G  +   + +    +I V       S  +            W +  G+ +
Sbjct: 1459 WVSAVAFSPDGKCL---ETNRGLLSITVNSEALSSSGGQKPASGFLFVDDDWVTIDGKHV 1515

Query: 405  IF 406
            ++
Sbjct: 1516 LW 1517



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 75/233 (32%), Gaps = 18/233 (7%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                 ++F P  S  + +  Y       I     +        + +      + A  FS 
Sbjct: 906  TYGSALVFSPTLSEIRNR--YWKERLSVIEMAAGIRDHWGAHRQTLEGHGDWVSAVAFSP 963

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G     S   D+ + ++  D  + A  + L        + ++SPD + +   SD    +
Sbjct: 964  DGNTLA-STSDDKTIRLW--DTATGAHRQTLEGHGHWVRAVAFSPDGNTLASASD---DK 1017

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             + +  +     ++  +    S     +SP  + +A          I +        R  
Sbjct: 1018 TIRLWDTATGAHRQTLEGHGDSVRAVAFSPDSNTLASASRDKT---IRLWDTATGAHRQT 1074

Query: 387  VEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            +E       A  +SP G +L  +     DT  +L+     G +   +     +
Sbjct: 1075 LEGHGHWVSAVAFSPDGNTLASASD---DTTIRLWDT-ATGAHRQTLEGHGDS 1123


>gi|332668331|ref|YP_004451119.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
 gi|332337145|gb|AEE54246.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
          Length = 1075

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 59/263 (22%), Positives = 111/263 (42%), Gaps = 32/263 (12%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +R+L+ ++D  L    FS        +       L V +  T   R  ++I    +  
Sbjct: 268 HPVRFLSQAKDGTLC---FSYAGNLYTMSPKAKPKQLNVNI-ATDARRNNEQILPVSAGA 323

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                SSNGK      +     +++   ++   T+R+TNT     S S+SPD   +++ S
Sbjct: 324 RDLAVSSNGKEVAFVFRG----EVFVTSVEGGVTKRITNTPEQERSVSFSPDGKALLYSS 379

Query: 321 DREGKEQLYVMQSNGSD-----------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +R    ++Y  + + S+           +  I ++ + +Y  P +SP G  IAF +   +
Sbjct: 380 ERGNSWKIYETKISRSEEPYFYASTLLKETPIIENTKENY-QPEYSPDGKEIAFIE---D 435

Query: 370 KFAIGVMKKDGSQERLLVEDS-------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +  + V      Q R L+ D        N Q  +WSP G+ ++F     G    ++  I 
Sbjct: 436 RMTLKVYNIASKQTRTLLTDQELFSMGDNDQYFSWSPDGKWILFDYSVPGVPTGEIGIIA 495

Query: 423 LNGRNETLINTPAYASD--PQWV 443
            NG+++ +  T +   D  P+W+
Sbjct: 496 SNGKSKVINLTESGFQDSRPKWI 518



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 82/251 (32%), Gaps = 33/251 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            T +    L  P  SP+ + V +      D+ +V    +        +    +    P +
Sbjct: 23  FTQNSPSWLRYPSISPDGKTVVFTY--KGDLWKV----SPEGGNAMPLTLHEAHDFMPVW 76

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--- 322
           S +GK    +  +    D++S+  +    +RLT          +S D   IVF S R   
Sbjct: 77  SRDGKTICFASDRFGNFDLFSIPAEGGEAKRLTFHSANEYPYDFSTDDKNIVFGSARMDL 136

Query: 323 --------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---- 370
                     + +LY +  NG     +                G  + +    G +    
Sbjct: 137 ASNRQYPTGSQPELYQVSLNGGKVSMLLPTPAEDVKHNK---DGSKLLYHDKKGGENTWR 193

Query: 371 --------FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                     + V      +   L   +   + P ++ + RS+++  + +G      +++
Sbjct: 194 KHHTSSITRDLWVYDSKTQKHTKLTTFNGEDRNPIFADNDRSVVYLSEANGSFNVHKFAL 253

Query: 422 DLNGRNETLIN 432
           D   + E L +
Sbjct: 254 DNPTKVEALTS 264



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 76/215 (35%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S N ++VA+    +        + +      KRI N      +  FS +GK  L S +
Sbjct: 327 AVSSNGKEVAFVFRGE------VFVTSVEGGVTKRITNTPEQERSVSFSPDGKALLYSSE 380

Query: 278 KDEAMDIYSVDLQSN-----------ATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +  +  IY   +  +               +      N    YSPD  +I F  DR    
Sbjct: 381 RGNSWKIYETKISRSEEPYFYASTLLKETPIIENTKENYQPEYSPDGKEIAFIEDR---M 437

Query: 327 QLYVMQSNGSDQKRISQDKE-----ASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKD 379
            L V        + +  D+E      +     WSP G  I F           IG++  +
Sbjct: 438 TLKVYNIASKQTRTLLTDQELFSMGDNDQYFSWSPDGKWILFDYSVPGVPTGEIGIIASN 497

Query: 380 GSQERL-LVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
           G  + + L E     + P W   G+++++   +DG
Sbjct: 498 GKSKVINLTESGFQDSRPKWILGGKAMVWFSNRDG 532



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 84/249 (33%), Gaps = 22/249 (8%)

Query: 214 LFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            ++P +SP+ +++A+        +  +    TR     + + +         +S +GK  
Sbjct: 418 NYQPEYSPDGKEIAFIEDRMTLKVYNIASKQTRTLLTDQELFSMGDNDQYFSWSPDGKWI 477

Query: 273 LISVQKDEAM--DIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           L           +I  +          LT + F +    +      +V+ S+R+G + + 
Sbjct: 478 LFDYSVPGVPTGEIGIIASNGKSKVINLTESGFQDSRPKWILGGKAMVWFSNRDGLKSVA 537

Query: 330 VMQSNGSDQKRISQDKEA------SYFDPVWSPQGDLIA--------FTKFSGEKFAIGV 375
              S+  D   +   +EA      +  D   +   +  A              +   +  
Sbjct: 538 QGGSSQVDAFALFFTQEAFDKYRLNKEDAALAKDLEEKATKADTTKKKDSPKKDSIVLDF 597

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTP 434
                 + +L +  SN+     S  G +L +  +   + G  L+S +L     + LI   
Sbjct: 598 EDLTLRKVKLTIHSSNMSDVLLSKDGETLYYLAR--FERGFNLWSTNLRTKETKMLIPLN 655

Query: 435 A-YASDPQW 442
           A      QW
Sbjct: 656 ATGGGSMQW 664



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 38/97 (39%), Gaps = 7/97 (7%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAP 395
            Q   +Q+  +    P  SP G  + FT        +  +  +G     L   +++   P
Sbjct: 19  SQSGFTQNSPSWLRYPSISPDGKTVVFTYKGD----LWKVSPEGGNAMPLTLHEAHDFMP 74

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            WS  G+++ F+  + G+    L+SI   G     + 
Sbjct: 75  VWSRDGKTICFASDRFGNF--DLFSIPAEGGEAKRLT 109


>gi|310641988|ref|YP_003946746.1| peptidase s9 prolyl oligopeptidase active site domain protein
           [Paenibacillus polymyxa SC2]
 gi|309246938|gb|ADO56505.1| Peptidase S9 prolyl oligopeptidase active site domain protein
           [Paenibacillus polymyxa SC2]
          Length = 675

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 88/277 (31%), Gaps = 60/277 (21%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVY---LMDTRIDRAPKRIGNFRSMILAPRFS 266
           R   + +P   P   ++AY           Y   +     +        +      P +S
Sbjct: 20  RFHWVSDPAVHPTSGEIAYVEQCINKEQTDYNSAIWLLPFEGEAPIPFTYGPKDETPVWS 79

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------- 319
            +G +       D    ++ +  +     +LT+      S S+SPD + I F        
Sbjct: 80  PDGSQLAFLRSTDGKRQVWIIPARGGEARQLTHVENNVRSLSWSPDGAYISFVAKTAENQ 139

Query: 320 -------------------------SDREG-----KEQLYVMQSNGSDQKRISQDKEASY 349
                                    SD  G     ++ LYV         +++       
Sbjct: 140 SSSTCDVGEQETHLEGRVVNRTKAKSDGYGLWDDTRDHLYVTDVTSGHTVQLTS-GAYDV 198

Query: 350 FDPVWSPQGDLIAFT-------------KFSGEKFAIGVMKKDGSQE---RLLVEDSNLQ 393
            +PVWSP G LI F              +   + F I     +G+     +L   +  ++
Sbjct: 199 AEPVWSPNGQLILFIARIAEHSKEDTDLRKQNDLFTIAPASSNGNAAAPFKLTHSELQIE 258

Query: 394 APTWSPSGRSLIFS---RKKDGDTGSKLYSIDLNGRN 427
           +  +SP G  + F    R   G T ++LY++  +G  
Sbjct: 259 SAAFSPDGTMIAFYGHDRHAKGATQTRLYTVPSSGGK 295



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/366 (13%), Positives = 108/366 (29%), Gaps = 89/366 (24%)

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS--LCVMDRD 199
           K+   +   +R   H +SD      +GE       I +V + +       +  + ++  +
Sbjct: 10  KRRIIAEDLYRF--HWVSDPAVHPTSGE-------IAYVEQCINKEQTDYNSAIWLLPFE 60

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G      T         P +SP+  ++A+    D    R   +        +++ +  + 
Sbjct: 61  GEAPIPFTYG--PKDETPVWSPDGSQLAFLRSTDGK--RQVWIIPARGGEARQLTHVENN 116

Query: 260 ILAPRFSSNGKRALIS-------------------------------------VQKDEAM 282
           + +  +S +G                                           +  D   
Sbjct: 117 VRSLSWSPDGAYISFVAKTAENQSSSTCDVGEQETHLEGRVVNRTKAKSDGYGLWDDTRD 176

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQLYVM 331
            +Y  D+ S  T +LT+  +      +SP+   I+F +            R+  +   + 
Sbjct: 177 HLYVTDVTSGHTVQLTSGAYDVAEPVWSPNGQLILFIARIAEHSKEDTDLRKQNDLFTIA 236

Query: 332 QSNGSDQKRISQDKEASYF---DPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE 383
            ++ +           S        +SP G +IAF           +  +  +   G + 
Sbjct: 237 PASSNGNAAAPFKLTHSELQIESAAFSPDGTMIAFYGHDRHAKGATQTRLYTVPSSGGKA 296

Query: 384 RLLVEDSNLQ----------------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             + E  +                   P +S  G+SL      +G     +Y   L+G  
Sbjct: 297 VCVSETLDAHLGNAGMSDMRSHLHVGPPRFSADGQSLYTLVTIEG--NVHVYQFALDGTF 354

Query: 428 ETLINT 433
           + L   
Sbjct: 355 KILTQG 360



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 45/182 (24%)

Query: 306 SASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             +  P S +I +          +    ++++   G      +   +     PVWSP G 
Sbjct: 26  DPAVHPTSGEIAYVEQCINKEQTDYNSAIWLLPFEGEAPIPFTYGPK--DETPVWSPDGS 83

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD------- 411
            +AF + +  K  + ++   G + R L   ++N+++ +WSP G  + F  K         
Sbjct: 84  QLAFLRSTDGKRQVWIIPARGGEARQLTHVENNVRSLSWSPDGAYISFVAKTAENQSSST 143

Query: 412 ----------------------------GDTGSKLYSIDLN-GRNETLINTPAYASDPQW 442
                                        DT   LY  D+  G    L +     ++P W
Sbjct: 144 CDVGEQETHLEGRVVNRTKAKSDGYGLWDDTRDHLYVTDVTSGHTVQLTSGAYDVAEPVW 203

Query: 443 VG 444
             
Sbjct: 204 SP 205



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 67/237 (28%), Gaps = 42/237 (17%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              ++ L V D    +   LT S    + EP +SPN Q + +     E       +  + 
Sbjct: 172 DDTRDHLYVTDVTSGHTVQLT-SGAYDVAEPVWSPNGQLILFIARIAEHSKEDTDLRKQN 230

Query: 247 DRAPKRIGNFRSMILAP-------------RFSSNGKRALISVQKDEA-----MDIYSVD 288
           D       +      AP              FS +G           A       +Y+V 
Sbjct: 231 DLFTIAPASSNGNAAAPFKLTHSELQIESAAFSPDGTMIAFYGHDRHAKGATQTRLYTVP 290

Query: 289 LQSNATE--------RLTNTLFINIS-------ASYSPDSSQIVFESDREGKEQLYVMQS 333
                           L N    ++          +S D   +      EG   +Y    
Sbjct: 291 SSGGKAVCVSETLDAHLGNAGMSDMRSHLHVGPPRFSADGQSLYTLVTIEGNVHVYQFAL 350

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEKFAIGVMKKDGSQERLL 386
           +G+ +  I    E   +    +     I          G+ F I +    G++ERL 
Sbjct: 351 DGTFK--ILTQGEREIYQFELTSDEQHIIAASTDVALPGDLFRIAIHS--GNEERLT 403



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 18/131 (13%)

Query: 332 QSNGSDQKRISQD---KEASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQ 382
              G+ ++RI  +   +     DP   P    IA+ +       +    AI ++  +G  
Sbjct: 4   SQAGTTKRRIIAEDLYRFHWVSDPAVHPTSGEIAYVEQCINKEQTDYNSAIWLLPFEGEA 63

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPA 435
                     + P WSP G  L F R  DG    +++ I   G     +        + +
Sbjct: 64  PIPFTYGPKDETPVWSPDGSQLAFLRSTDGKR--QVWIIPARGGEARQLTHVENNVRSLS 121

Query: 436 YASDPQWVGFM 446
           ++ D  ++ F+
Sbjct: 122 WSPDGAYISFV 132


>gi|317033773|ref|XP_001395414.2| hypothetical protein ANI_1_1672104 [Aspergillus niger CBS 513.88]
          Length = 688

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 58/340 (17%), Positives = 101/340 (29%), Gaps = 89/340 (26%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAY 228
             +    I +++    SG     L + + DG N  + L    +   + P +S + + + +
Sbjct: 61  PIEGKKGIFYMNRIGPSGG---QLWISNSDGTNATQLLGNQSNAFDYHPTWSSDGEWIVF 117

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSV 287
            +                    + +    S+      S NGK     S Q +   +I+  
Sbjct: 118 TSERRGPGQSDLYRVRVDGSGLETLAATDSVEDIGVLSPNGKTLAYVSTQGNYTTNIWVK 177

Query: 288 DLQSNATERLTNTLFINIS---------ASYSPDSSQIVFESDR--------EGKE---- 326
           DL S   + LT+T                S+SPD   IVF SDR        +G      
Sbjct: 178 DLASGQAQNLTDTASNRADNTWPTGHFRPSWSPDGEWIVFSSDRNTDWTGHSDGTGWEHT 237

Query: 327 ---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------------- 370
               +Y ++ +GSD + + + +  S   P +SP G  I +   + E              
Sbjct: 238 QTLGVYAVRPDGSDFRTVIRQEGYSLGTPQFSPDGKRIIYNNMTTEDTYGCHGVSAQQEA 297

Query: 371 --FAIGVMKKDGSQERLLVEDS-------------------------------------- 390
               I  +        +                                           
Sbjct: 298 VTAQIYSVDFATGSNVIAHTSGSYPKVGQHYIGNSTNIGYLIKAGDYEGIHYTKPDFTHR 357

Query: 391 -----NLQAPTWSPSGRSLIFS--RKKDGDTGSKLYSIDL 423
                N++ P WSP G  L++            KL+S D 
Sbjct: 358 SFNLTNMRDPWWSPDGSKLVYWVPNWTQQAAELKLWSYDT 397



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 82/225 (36%), Gaps = 37/225 (16%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL------ISVQKDEAMDIYSVDLQSNAT 294
           + +       + +    S    P ++ +G   +         +      IY         
Sbjct: 450 IYNISNSTEVEWLEEGNSGAFQPSWNPDGTELVSGFGAWFVSRTTNTAKIYHAFANGTWH 509

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEASYFD 351
             LT+    +   S+SPD S IV+       E    L+++        +++   +     
Sbjct: 510 TNLTDGSDNSGFPSWSPDGSAIVYRKWSLATEAPLGLHILNFTTGKTHQLT---DGWDNT 566

Query: 352 PVWSPQGDLIAFTKFSG-----------EKFAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
           P WSP G+ I FT+ +            ++F I  ++ DGS+   + +  SN     WS 
Sbjct: 567 PGWSPDGERIVFTRNNNWTESYGARWYADRFDIYTIRPDGSELTRVTDSLSNDAHAVWSQ 626

Query: 400 SGRSLIFSRKKDG------------DTGSKLYSIDLNGRNETLIN 432
            GR +++S  + G                ++  ++ +G N+TL+ 
Sbjct: 627 DGR-IMWSSGQYGFKDESALFDDTFQPYGQIMVMNYDGTNKTLVT 670



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 81/208 (38%), Gaps = 33/208 (15%)

Query: 269 GKRALISVQKDE--AMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREG 324
           GK+ +  + +       ++  +       +L    +   +   ++S D   IVF S+R G
Sbjct: 64  GKKGIFYMNRIGPSGGQLWISNSDGTNATQLLGNQSNAFDYHPTWSSDGEWIVFTSERRG 123

Query: 325 KEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGS 381
             Q  LY ++ +GS  + ++          V SP G  +A+    G     I V      
Sbjct: 124 PGQSDLYRVRVDGSGLETLAATDSVEDIG-VLSPNGKTLAYVSTQGNYTTNIWVKDLASG 182

Query: 382 QERLLVEDSNLQA----------PTWSPSGRSLIFSRKKDGDTGSK-------------L 418
           Q + L + ++ +A          P+WSP G  ++FS  ++ D                 +
Sbjct: 183 QAQNLTDTASNRADNTWPTGHFRPSWSPDGEWIVFSSDRNTDWTGHSDGTGWEHTQTLGV 242

Query: 419 YSIDLNGRN-ETLINTPAYA-SDPQWVG 444
           Y++  +G +  T+I    Y+   PQ+  
Sbjct: 243 YAVRPDGSDFRTVIRQEGYSLGTPQFSP 270



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 85/229 (37%), Gaps = 39/229 (17%)

Query: 206 LTPSRDQILFEPRFSPNQQKV-----AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                +   F+P ++P+  ++     A+      +  ++Y            + +     
Sbjct: 461 WLEEGNSGAFQPSWNPDGTELVSGFGAWFVSRTTNTAKIY-HAFANGTWHTNLTDGSDNS 519

Query: 261 LAPRFSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             P +S +G   +    S+  +  + ++ ++  +  T +LT+    + +  +SPD  +IV
Sbjct: 520 GFPSWSPDGSAIVYRKWSLATEAPLGLHILNFTTGKTHQLTD--GWDNTPGWSPDGERIV 577

Query: 318 FESDREG-----------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           F  +              +  +Y ++ +GS+  R++ D  ++    VWS  G  I ++  
Sbjct: 578 FTRNNNWTESYGARWYADRFDIYTIRPDGSELTRVT-DSLSNDAHAVWSQDGR-IMWSSG 635

Query: 367 SGE--------------KFAIGVMKKDGSQERLLVED-SNLQAPTWSPS 400
                               I VM  DG+ + L+ +       P + P+
Sbjct: 636 QYGFKDESALFDDTFQPYGQIMVMNYDGTNKTLVTDTIWEDSMPLYMPN 684



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 72/155 (46%), Gaps = 23/155 (14%)

Query: 313 SSQIVFESDREG--KEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFT--KFS 367
             + +F  +R G    QL++  S+G++  ++  +   A  + P WS  G+ I FT  +  
Sbjct: 64  GKKGIFYMNRIGPSGGQLWISNSDGTNATQLLGNQSNAFDYHPTWSSDGEWIVFTSERRG 123

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NG 425
             +  +  ++ DGS    L    +++     SP+G++L +   + G+  + ++  DL +G
Sbjct: 124 PGQSDLYRVRVDGSGLETLAATDSVEDIGVLSPNGKTLAYVSTQ-GNYTTNIWVKDLASG 182

Query: 426 RNETLINT---------------PAYASDPQWVGF 445
           + + L +T               P+++ D +W+ F
Sbjct: 183 QAQNLTDTASNRADNTWPTGHFRPSWSPDGEWIVF 217



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 108/361 (29%), Gaps = 105/361 (29%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQIL--------FEPRFSPNQQKVAYAT-------- 230
           G    ++ V D      + LT +             F P +SP+ + + +++        
Sbjct: 168 GNYTTNIWVKDLASGQAQNLTDTASNRADNTWPTGHFRPSWSPDGEWIVFSSDRNTDWTG 227

Query: 231 ------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---------- 274
                 ++    L VY +          I      +  P+FS +GKR +           
Sbjct: 228 HSDGTGWEHTQTLGVYAVRPDGSDFRTVIRQEGYSLGTPQFSPDGKRIIYNNMTTEDTYG 287

Query: 275 -----SVQKDEAMDIYSVDLQSN--------------ATERLTNTLFINI---------- 305
                + Q+     IYSVD  +                   + N+  I            
Sbjct: 288 CHGVSAQQEAVTAQIYSVDFATGSNVIAHTSGSYPKVGQHYIGNSTNIGYLIKAGDYEGI 347

Query: 306 ------------------SASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQ-- 343
                                +SPD S++V+   +  +   +L +   +   + R     
Sbjct: 348 HYTKPDFTHRSFNLTNMRDPWWSPDGSKLVYWVPNWTQQAAELKLWSYDTEWEYRYMDVF 407

Query: 344 -------DKEASYFDPVWSPQGDLI----AFTKFSG--EKFAIGVMKKDGSQERLLVEDS 390
                  ++ AS    + S  G L+     +T      + + I  +      E L   +S
Sbjct: 408 PMHNTVINRIASTQKVLGSANGSLVHSSPVYTDVVDALDSYDIYNISNSTEVEWLEEGNS 467

Query: 391 NLQAPTWSPSGRSLI------FSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWV 443
               P+W+P G  L+      F  +      +K+Y    NG   T L +    +  P W 
Sbjct: 468 GAFQPSWNPDGTELVSGFGAWFVSRT--TNTAKIYHAFANGTWHTNLTDGSDNSGFPSWS 525

Query: 444 G 444
            
Sbjct: 526 P 526



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 80/237 (33%), Gaps = 56/237 (23%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            G  F S   +  KI H  ++  + +   +  D +    +  +       K SL      
Sbjct: 485 FGAWFVSRTTNTAKIYHAFANGTWHTNLTDGSDNSGFPSWSPDGSAIVYRKWSLATEAPL 544

Query: 200 GANIRYLTPSR-----DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           G +I   T  +     D     P +SP+ +++ +                          
Sbjct: 545 GLHILNFTTGKTHQLTDGWDNTPGWSPDGERIVFTRN----------------------- 581

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           N  +     R+ ++              DIY++    +   R+T++L  +  A +S D  
Sbjct: 582 NNWTESYGARWYAD------------RFDIYTIRPDGSELTRVTDSLSNDAHAVWSQDG- 628

Query: 315 QIVFESDREG--------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +I++ S + G                Q+ VM  +G+++  ++ D       P++ P 
Sbjct: 629 RIMWSSGQYGFKDESALFDDTFQPYGQIMVMNYDGTNKTLVT-DTIWEDSMPLYMPN 684


>gi|45656912|ref|YP_000998.1| hypothetical protein LIC11028 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600149|gb|AAS69635.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 2588

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 97/264 (36%), Gaps = 45/264 (17%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DE 280
           +   + Y T   +    ++  D +       +    +    P  S +GK+ +   ++ D 
Sbjct: 66  DGSYLFYTT-GQKGNYDIWFRDLK-SSITVPVTTHPAPEYKPAISPDGKKLVFVSEQYDS 123

Query: 281 AMDIYSVDLQSN-------ATER--------LTNT---------LFINISASYSPDSSQI 316
           + D+  + +            +R        LTN+          +++    ++PD   +
Sbjct: 124 SGDLILLKMNPGLWADKILQGKRFINSDFIILTNSNFSDTGKKDSYVDTDPFFAPDGRHL 183

Query: 317 VFESDR--EGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-A 372
           VF +DR   G + L V+ + G +  K ++Q   AS   P WS  G  I +  +    F  
Sbjct: 184 VFSTDRLTPGIQNLVVLDTEGKEPMKLLTQKGGAS---PFWSKDGKSIVYISYQDGVFGD 240

Query: 373 IGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSR-----KKDGDT----GSKLYSID 422
           + ++    G  ERL  +     +P+ S   R L ++       ++G       S +   D
Sbjct: 241 VYLLDLSSGKNERLTKDSYLNFSPSLSEDKRYLYYTSIQNDTNRNGRLDERDNSLIVRKD 300

Query: 423 L-NGRNETLINTPAYASDPQWVGF 445
           L  G    L +      D ++  F
Sbjct: 301 LKTGVVRRLTSGNDSLFDSRFSAF 324



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/225 (21%), Positives = 86/225 (38%), Gaps = 28/225 (12%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T  +  P  +   R   L    +++G     +  +    DI+  DL+S+ T  +T     
Sbjct: 42  TPENEKPFPLTVQRGNNLYNSTTADGSYLFYTTGQKGNYDIWFRDLKSSITVPVTTHPAP 101

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSN-------------GSDQKRISQDKEA 347
               + SPD  ++VF S   D  G   L  M                 SD   ++    +
Sbjct: 102 EYKPAISPDGKKLVFVSEQYDSSGDLILLKMNPGLWADKILQGKRFINSDFIILTNSNFS 161

Query: 348 S--------YFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                      DP ++P G  + F+  + +     + V+  +G +   L+      +P W
Sbjct: 162 DTGKKDSYVDTDPFFAPDGRHLVFSTDRLTPGIQNLVVLDTEGKEPMKLLTQKGGASPFW 221

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQ 441
           S  G+S+++   +DG  G  +Y +DL +G+NE L         P 
Sbjct: 222 SKDGKSIVYISYQDGVFG-DVYLLDLSSGKNERLTKDSYLNFSPS 265



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 91/283 (32%), Gaps = 44/283 (15%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
                      +   D   ++I     +     ++P  SP+ +K+ + +   +    + L
Sbjct: 71  FYTTGQKGNYDIWFRDLK-SSITVPVTTHPAPEYKPAISPDGKKLVFVSEQYDSSGDLIL 129

Query: 242 MDTRIDRAPKRIGNFRS-----------------------MILAPRFSSNGKRALISVQK 278
           +         +I   +                        +   P F+ +G+  + S  +
Sbjct: 130 LKMNPGLWADKILQGKRFINSDFIILTNSNFSDTGKKDSYVDTDPFFAPDGRHLVFSTDR 189

Query: 279 --DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQSNG 335
                 ++  +D +     +L        S  +S D   IV+ S ++G    +Y++  + 
Sbjct: 190 LTPGIQNLVVLDTEGKEPMKLLTQKG-GASPFWSKDGKSIVYISYQDGVFGDVYLLDLSS 248

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-----------EKFAIGVMKKDGSQER 384
              +R+++D   + F P  S     + +T               +   I          R
Sbjct: 249 GKNERLTKDSYLN-FSPSLSEDKRYLYYTSIQNDTNRNGRLDERDNSLIVRKDLKTGVVR 307

Query: 385 LLVEDSNLQAPT-WSP-SGRSLIFSRKKDGDTGSKLYSIDLNG 425
            L   ++    + +S  +G S++F+          +Y I  +G
Sbjct: 308 RLTSGNDSLFDSRFSAFNGGSILFTAAYYDT--LNIYFIPASG 348



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 77/194 (39%), Gaps = 15/194 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +N          +  +P F+P+ + + ++T      ++  ++     + P ++   +   
Sbjct: 158 SNFSDTGKKDSYVDTDPFFAPDGRHLVFSTDRLTPGIQNLVVLDTEGKEPMKLLTQKGGA 217

Query: 261 LAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            +P +S +GK  +    +D    D+Y +DL S   ERLT   ++N S S S D   + + 
Sbjct: 218 -SPFWSKDGKSIVYISYQDGVFGDVYLLDLSSGKNERLTKDSYLNFSPSLSEDKRYLYYT 276

Query: 320 S-----DREG------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFS 367
           S     +R G         +          +R++   + S FD  +S   G  I FT   
Sbjct: 277 SIQNDTNRNGRLDERDNSLIVRKDLKTGVVRRLTSGND-SLFDSRFSAFNGGSILFTAAY 335

Query: 368 GEKFAIGVMKKDGS 381
            +   I  +   GS
Sbjct: 336 YDTLNIYFIPASGS 349



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 55/177 (31%), Gaps = 27/177 (15%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               LT     N+  S + D S + + + ++G   ++      S    ++    A  + P
Sbjct: 47  KPFPLTVQRGNNLYNSTTADGSYLFYTTGQKGNYDIWFRDLKSSITVPVTT-HPAPEYKP 105

Query: 353 VWSPQGDLIAFTK---FSGEKFAIGVMKKD-------------GSQERLLV--------- 387
             SP G  + F      S     +  M                 S   +L          
Sbjct: 106 AISPDGKKLVFVSEQYDSSGDLILLKMNPGLWADKILQGKRFINSDFIILTNSNFSDTGK 165

Query: 388 -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +      P ++P GR L+FS  +       L  +D  G+    + T    + P W 
Sbjct: 166 KDSYVDTDPFFAPDGRHLVFSTDRLTPGIQNLVVLDTEGKEPMKLLTQKGGASPFWS 222


>gi|24215766|ref|NP_713247.1| TolB-like protein [Leptospira interrogans serovar Lai str. 56601]
 gi|24196947|gb|AAN50265.1| TolB-related protein [Leptospira interrogans serovar Lai str.
           56601]
          Length = 2588

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 97/264 (36%), Gaps = 45/264 (17%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DE 280
           +   + Y T   +    ++  D +       +    +    P  S +GK+ +   ++ D 
Sbjct: 66  DGSYLFYTT-GQKGNYDIWFRDLK-SSITVPVTTHPAPEYKPAISPDGKKLVFVSEQYDS 123

Query: 281 AMDIYSVDLQSN-------ATER--------LTNT---------LFINISASYSPDSSQI 316
           + D+  + +            +R        LTN+          +++    ++PD   +
Sbjct: 124 SGDLILLKMNPGLWADKILQGKRFINSDFIILTNSNFSDTGKKDSYVDTDPFFAPDGRHL 183

Query: 317 VFESDR--EGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-A 372
           VF +DR   G + L V+ + G +  K ++Q   AS   P WS  G  I +  +    F  
Sbjct: 184 VFSTDRLTPGIQNLVVLDTEGKEPMKLLTQKGGAS---PFWSKDGKSIVYISYQDGVFGD 240

Query: 373 IGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSR-----KKDGDT----GSKLYSID 422
           + ++    G  ERL  +     +P+ S   R L ++       ++G       S +   D
Sbjct: 241 VYLLDLSSGKNERLTKDSYLNFSPSLSEDKRYLYYTSIQNDTNRNGRLDERDNSLIVRKD 300

Query: 423 L-NGRNETLINTPAYASDPQWVGF 445
           L  G    L +      D ++  F
Sbjct: 301 LKTGVVRRLTSGNDSLFDSRFSAF 324



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/225 (21%), Positives = 86/225 (38%), Gaps = 28/225 (12%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T  +  P  +   R   L    +++G     +  +    DI+  DL+S+ T  +T     
Sbjct: 42  TPENEKPFPLTVQRGNNLYNSTTADGSYLFYTTGQKGNYDIWFRDLKSSITVPVTTHPAP 101

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSN-------------GSDQKRISQDKEA 347
               + SPD  ++VF S   D  G   L  M                 SD   ++    +
Sbjct: 102 EYKPAISPDGKKLVFVSEQYDSSGDLILLKMNPGLWADKILQGKRFINSDFIILTNSNFS 161

Query: 348 S--------YFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                      DP ++P G  + F+  + +     + V+  +G +   L+      +P W
Sbjct: 162 DTGKKDSYVDTDPFFAPDGRHLVFSTDRLTPGIQNLVVLDTEGKEPMKLLTQKGGASPFW 221

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQ 441
           S  G+S+++   +DG  G  +Y +DL +G+NE L         P 
Sbjct: 222 SKDGKSIVYISYQDGVFG-DVYLLDLSSGKNERLTKDSYLNFSPS 265



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 91/283 (32%), Gaps = 44/283 (15%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
                      +   D   ++I     +     ++P  SP+ +K+ + +   +    + L
Sbjct: 71  FYTTGQKGNYDIWFRDLK-SSITVPVTTHPAPEYKPAISPDGKKLVFVSEQYDSSGDLIL 129

Query: 242 MDTRIDRAPKRIGNFRS-----------------------MILAPRFSSNGKRALISVQK 278
           +         +I   +                        +   P F+ +G+  + S  +
Sbjct: 130 LKMNPGLWADKILQGKRFINSDFIILTNSNFSDTGKKDSYVDTDPFFAPDGRHLVFSTDR 189

Query: 279 --DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQSNG 335
                 ++  +D +     +L        S  +S D   IV+ S ++G    +Y++  + 
Sbjct: 190 LTPGIQNLVVLDTEGKEPMKLLTQKG-GASPFWSKDGKSIVYISYQDGVFGDVYLLDLSS 248

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-----------EKFAIGVMKKDGSQER 384
              +R+++D   + F P  S     + +T               +   I          R
Sbjct: 249 GKNERLTKDSYLN-FSPSLSEDKRYLYYTSIQNDTNRNGRLDERDNSLIVRKDLKTGVVR 307

Query: 385 LLVEDSNLQAPT-WSP-SGRSLIFSRKKDGDTGSKLYSIDLNG 425
            L   ++    + +S  +G S++F+          +Y I  +G
Sbjct: 308 RLTSGNDSLFDSRFSAFNGGSILFTAAYYDT--LNIYFIPASG 348



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 77/194 (39%), Gaps = 15/194 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +N          +  +P F+P+ + + ++T      ++  ++     + P ++   +   
Sbjct: 158 SNFSDTGKKDSYVDTDPFFAPDGRHLVFSTDRLTPGIQNLVVLDTEGKEPMKLLTQKGGA 217

Query: 261 LAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            +P +S +GK  +    +D    D+Y +DL S   ERLT   ++N S S S D   + + 
Sbjct: 218 -SPFWSKDGKSIVYISYQDGVFGDVYLLDLSSGKNERLTKDSYLNFSPSLSEDKRYLYYT 276

Query: 320 S-----DREG------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFS 367
           S     +R G         +          +R++   + S FD  +S   G  I FT   
Sbjct: 277 SIQNDTNRNGRLDERDNSLIVRKDLKTGVVRRLTSGND-SLFDSRFSAFNGGSILFTAAY 335

Query: 368 GEKFAIGVMKKDGS 381
            +   I  +   GS
Sbjct: 336 YDTLNIYFIPASGS 349



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 55/177 (31%), Gaps = 27/177 (15%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               LT     N+  S + D S + + + ++G   ++      S    ++    A  + P
Sbjct: 47  KPFPLTVQRGNNLYNSTTADGSYLFYTTGQKGNYDIWFRDLKSSITVPVTT-HPAPEYKP 105

Query: 353 VWSPQGDLIAFTK---FSGEKFAIGVMKKD-------------GSQERLLV--------- 387
             SP G  + F      S     +  M                 S   +L          
Sbjct: 106 AISPDGKKLVFVSEQYDSSGDLILLKMNPGLWADKILQGKRFINSDFIILTNSNFSDTGK 165

Query: 388 -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +      P ++P GR L+FS  +       L  +D  G+    + T    + P W 
Sbjct: 166 KDSYVDTDPFFAPDGRHLVFSTDRLTPGIQNLVVLDTEGKEPMKLLTQKGGASPFWS 222


>gi|153212767|ref|ZP_01948403.1| tricorn protease [Vibrio cholerae 1587]
 gi|124116280|gb|EAY35100.1| tricorn protease [Vibrio cholerae 1587]
          Length = 1084

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 43/254 (16%)

Query: 211 DQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           D     P +      SP+ QK+A+             +          +         P 
Sbjct: 32  DSTQARPTWLRDIALSPDGQKIAFTYAGQ------IWLVPAQGGDAVALTESGVYSETPI 85

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S + +    +  +    D++ + +Q   + RLT     +I  ++S D  Q+ F S R G
Sbjct: 86  WSPDSQSIAFTADRYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLG 145

Query: 325 KE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            +             QLY + + G  ++R+      +  D   SP    I +T       
Sbjct: 146 DDKANANVKQGSFMAQLYSVPAAGGREQRVL---PIAISDLAISPSHSDILYTNQPSDEQ 202

Query: 367 -------SGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  S     I       G   ++       + P WS  G S+ +  ++ G     +
Sbjct: 203 PWRKGAVSDATRDIWQWSPRTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSF--NI 260

Query: 419 YSIDLNGRNETLIN 432
           +    +G     I 
Sbjct: 261 WQQRFDGSEPVQIT 274



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 71/205 (34%), Gaps = 30/205 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G++   +     A  I+ V  Q      LT +   + +  +SPDS  I F +DR 
Sbjct: 45  ALSPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRY 100

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------ 371
           G   ++++   G + +R++    A      +S  G  + F+                   
Sbjct: 101 GLGDVFILSIQGGESRRLTYHG-AKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFM 159

Query: 372 -AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYS 420
             +  +   G +E+ ++    +     SPS   ++++ +             D    ++ 
Sbjct: 160 AQLYSVPAAGGREQRVL-PIAISDLAISPSHSDILYTNQPSDEQPWRKGAVSDATRDIWQ 218

Query: 421 ID-LNGRNETLINTPAYASDPQWVG 444
                G++  +        +P W  
Sbjct: 219 WSPRTGKHTQITTFRGEDRNPVWSA 243



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 99/331 (29%), Gaps = 89/331 (26%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRID 247
           G + R        I +   FS + Q++ +++    D            + ++Y +     
Sbjct: 113 GESRRLTYHGAKDIPY--AFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAGG 170

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIYSVDLQSNATE 295
           R  + +      I     S +    L + Q             D   DI+    ++    
Sbjct: 171 REQRVL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGAVSDATRDIWQWSPRTGKHT 227

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------------ 343
           ++T     + +  +S D S + + S++ G   ++  + +GS+  +I+             
Sbjct: 228 QITTFRGEDRNPVWSADGSSMYYLSEQAGSFNIWQQRFDGSEPVQITDHQKLPVRFLSAS 287

Query: 344 ---DKEASYFDPVW--------------------SPQGDLIAFTKFSGEKF--------- 371
              D    +   +W                     P G           +          
Sbjct: 288 LQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEATEMVVAPNAAEV 347

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT---------G 415
                  + V+       + + +    +   ++S  G  LI++ +++G           G
Sbjct: 348 AIVARGDVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSYVNDG 407

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            K +S  L+   E ++ T      P +   +
Sbjct: 408 GKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 341 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDVSFSSDGYRLIYASERE 394

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   +                  LT    + I   YSP+  +IV+   RE +  L
Sbjct: 395 GSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDV-IQPLYSPNLKRIVY---RENRNTL 450

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + I     +     I ++K DGS+ 
Sbjct: 451 KVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEA 510

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNG 425
            + L +    + AP +S  G+ + +     G  D    +   D+ G
Sbjct: 511 PINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDMVVQYDVYG 556



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 99/286 (34%), Gaps = 41/286 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------KVAYATYDDEDILRVYLMDTR 245
           +     DG+    +T  +   +     S           ++       +   +V +   R
Sbjct: 260 IWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRR 319

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +   NF         + N     I  + D    +Y V L S  T+R+T+T    
Sbjct: 320 SAMPDGRHNVNFNLEATEMVVAPNAAEVAIVARGD----VYVVSLLSGLTQRITDTPEAE 375

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPV 353
              S+S D  ++++ S+REG   LY    N             ++  ++ +++     P+
Sbjct: 376 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQD--VIQPL 433

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIF 406
           +SP    I + +       + V   +  +   L++   L +         WSP    ++ 
Sbjct: 434 YSPNLKRIVYRENRNT---LKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVT 490

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGFM 446
             +   +   +L   D +     L  +      P +++D QWV ++
Sbjct: 491 RDRAMSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWL 536



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 19/174 (10%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+  +   ++ + Y+ D        +D   + +      ++ P +S N 
Sbjct: 379 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR +    ++    +   D++ + T  L +   +      ++S  +SPDS  IV   DR 
Sbjct: 439 KRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV-TRDRA 494

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                + +++ +GS+          S F P +S  G  + +   +     I  M
Sbjct: 495 MSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDM 548


>gi|242761183|ref|XP_002340131.1| G-protein beta WD-40 repeats containing protein, putative
            [Talaromyces stipitatus ATCC 10500]
 gi|218723327|gb|EED22744.1| G-protein beta WD-40 repeats containing protein, putative
            [Talaromyces stipitatus ATCC 10500]
          Length = 1611

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 74/419 (17%), Positives = 152/419 (36%), Gaps = 75/419 (17%)

Query: 71   KDLQRSDVFNLISQDSF------------KQKITNPDSIPRFQDWNSLGAQVLVT---GR 115
             DL  S  F+   Q                +  +   ++    DW       +     G+
Sbjct: 1099 SDLVHSVAFSPDGQTLASGSRDETVKLWDIKTGSELQTLQGHSDW----VDSVAFSPDGQ 1154

Query: 116  VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS-------------DDI 162
             +  G D   V  +LWDVK   ++   +  SS      + H+++             D+ 
Sbjct: 1155 TLASGSDDETV--KLWDVKTGSELQTLQGHSS------LVHSVAFSPDGQTLASGSRDET 1206

Query: 163  Y-----------QSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
                        Q++ G  G   S       +++ SG    ++ + D    +        
Sbjct: 1207 VKFWDVKTGSELQTLQGHSGSVYSVAFSPDGQTLASGSRDETVKLWDVKTGSELQTLQGH 1266

Query: 211  DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
              +++   FSP+ Q +A  + D+     V L D +     + +      + +  FS +G+
Sbjct: 1267 SSLVYSVAFSPDGQTLASGSRDE----TVKLWDVKTGSELQTLQGHSGSVYSVAFSPDGQ 1322

Query: 271  RALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
                S  +DE + ++  D+++ +  + L        S ++SPD   +   SD    E + 
Sbjct: 1323 TLA-SGSRDETVKLW--DVKTGSELQTLQGHSGSVYSVAFSPDGQTLASGSD---DETVK 1376

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +       + +  Q    S     +SP G  +A +    +   +  +K  GS+ + L   
Sbjct: 1377 LWDVKTGSELQTLQGHSDSVHSVAFSPNGQTLA-SGSHDKTVKLWDVKT-GSELQTLQGH 1434

Query: 390  SNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET------LINTPAYASDPQ 441
            S+   +  +SP G++L    +   D   KL+ +      +T      L+++ A++ D Q
Sbjct: 1435 SHWVHSVAFSPDGQTLASGSR---DETVKLWDVKTGSELQTLQGHSSLVDSVAFSPDGQ 1490



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 62/336 (18%), Positives = 125/336 (37%), Gaps = 48/336 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ +  G D + V  +L DVK   ++   +            H  S  +Y       G  
Sbjct: 985  GQTLASGSDDMTV--KLCDVKTGSELQTLQ-----------GH--SGSVYSVAFSPDG-- 1027

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    +++ SG    ++ + D    +          ++    FSPN Q +A  ++D 
Sbjct: 1028 --------QTLASGSHDKTVKLWDVKTGSELQTLQGHSSLVHSVAFSPNGQTLASGSHDK 1079

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L D +     + +     ++ +  FS +G+    S  +DE + ++  D+++ +
Sbjct: 1080 ----TVKLWDVKTGSELQTLQGHSDLVHSVAFSPDGQTLA-SGSRDETVKLW--DIKTGS 1132

Query: 294  TER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              + L        S ++SPD   +   SD    E + +       + +  Q   +     
Sbjct: 1133 ELQTLQGHSDWVDSVAFSPDGQTLASGSD---DETVKLWDVKTGSELQTLQGHSSLVHSV 1189

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
             +SP G  +A            V  K GS+ + L     ++ +  +SP G++L    +  
Sbjct: 1190 AFSPDGQTLASGSRDETVKFWDV--KTGSELQTLQGHSGSVYSVAFSPDGQTLASGSR-- 1245

Query: 412  GDTGSKLYSIDLNGRNET------LINTPAYASDPQ 441
             D   KL+ +      +T      L+ + A++ D Q
Sbjct: 1246 -DETVKLWDVKTGSELQTLQGHSSLVYSVAFSPDGQ 1280



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 52/316 (16%), Positives = 112/316 (35%), Gaps = 40/316 (12%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        +LWDVK   ++   +            H  S  +Y       G     
Sbjct: 1238 QTLASGSRDETVKLWDVKTGSELQTLQ-----------GH--SSLVYSVAFSPDG----- 1279

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 +++ SG    ++ + D    +           ++   FSP+ Q +A  + D+   
Sbjct: 1280 -----QTLASGSRDETVKLWDVKTGSELQTLQGHSGSVYSVAFSPDGQTLASGSRDE--- 1331

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              V L D +     + +      + +  FS +G+    S   DE + ++  D+++ +  +
Sbjct: 1332 -TVKLWDVKTGSELQTLQGHSGSVYSVAFSPDGQTLA-SGSDDETVKLW--DVKTGSELQ 1387

Query: 297  LTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                   ++ S ++SP+   +   S     + + +       + +  Q          +S
Sbjct: 1388 TLQGHSDSVHSVAFSPNGQTLASGSH---DKTVKLWDVKTGSELQTLQGHSHWVHSVAFS 1444

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            P G  +A +    E   +  +K  GS+ + L    S + +  +SP G++L+       D 
Sbjct: 1445 PDGQTLA-SGSRDETVKLWDVKT-GSELQTLQGHSSLVDSVAFSPDGQTLVSGSW---DK 1499

Query: 415  GSKLYSIDLNGRNETL 430
              KL+ +      +TL
Sbjct: 1500 TVKLWDVKTGSELQTL 1515



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 53/348 (15%), Positives = 124/348 (35%), Gaps = 45/348 (12%)

Query: 108  AQVLVTGRVIKEGKD---RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
            ++ +     ++        + +   L+D   ++ I+   + +  A  +  +         
Sbjct: 880  SEAVAMIDAVQSSDGVSTDVEISGFLYD--AKRFILKNAYIAGIAPLQLYS--------- 928

Query: 165  SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR--DGANIR-YLTPSRDQILFEPRFSP 221
                  G   S +  +   +  G I   L +  +  D  +            +    FSP
Sbjct: 929  -----SGLVFSPMQSIVRRIFPGSILKHLHIQPQVEDLWSPGLQTLEGHSGWVDSVAFSP 983

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + Q +A  + D      V L D +     + +      + +  FS +G+    S   D+ 
Sbjct: 984  DGQTLASGSDDM----TVKLCDVKTGSELQTLQGHSGSVYSVAFSPDGQTLA-SGSHDKT 1038

Query: 282  MDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + ++  D+++ +  + L     +  S ++SP+   +   S     + + +       + +
Sbjct: 1039 VKLW--DVKTGSELQTLQGHSSLVHSVAFSPNGQTLASGSH---DKTVKLWDVKTGSELQ 1093

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSP 399
              Q          +SP G  +A +    E   +  +K  GS+ + L   S+   +  +SP
Sbjct: 1094 TLQGHSDLVHSVAFSPDGQTLA-SGSRDETVKLWDIKT-GSELQTLQGHSDWVDSVAFSP 1151

Query: 400  SGRSLIFSRKKDGDTGSKLYSIDLNGRNET------LINTPAYASDPQ 441
             G++L        D   KL+ +      +T      L+++ A++ D Q
Sbjct: 1152 DGQTLASGSD---DETVKLWDVKTGSELQTLQGHSSLVHSVAFSPDGQ 1196



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 70/183 (38%), Gaps = 32/183 (17%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ +  G D   V  +LWDVK   ++   +            H  SD ++       G  
Sbjct: 1363 GQTLASGSDDETV--KLWDVKTGSELQTLQ-----------GH--SDSVHSVAFSPNG-- 1405

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    +++ SG    ++ + D    +           +    FSP+ Q +A  + D+
Sbjct: 1406 --------QTLASGSHDKTVKLWDVKTGSELQTLQGHSHWVHSVAFSPDGQTLASGSRDE 1457

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L D +     + +    S++ +  FS +G+  + S   D+ + ++  D+++ +
Sbjct: 1458 ----TVKLWDVKTGSELQTLQGHSSLVDSVAFSPDGQTLV-SGSWDKTVKLW--DVKTGS 1510

Query: 294  TER 296
              +
Sbjct: 1511 ELQ 1513


>gi|157363040|ref|YP_001469807.1| hypothetical protein Tlet_0173 [Thermotoga lettingae TMO]
 gi|157313644|gb|ABV32743.1| conserved hypothetical protein [Thermotoga lettingae TMO]
          Length = 425

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 71/455 (15%), Positives = 146/455 (32%), Gaps = 100/455 (21%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
                +  +L   F        +K+   S+  + +            L   VS+V+S   
Sbjct: 1   MRRFIIAFLLFCFFVCGLSGVQLKIEFKSSADTKI------------LVEDVSKVISS-- 46

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF-RLWD 132
                  L+ + ++ +   +             G+ +L TG   +       + F   +D
Sbjct: 47  -------LLPEKTYLEITLD-------------GSNLLATGDSTQI-DTVYELTFIATYD 85

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
               K      + +S     ++A++ S     S   ++   +    FV E     + K S
Sbjct: 86  ATQNK------YNASWYDQTQLAYSCS----YSPKDQRPYSD----FVRECAHYPLEKVS 131

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L ++  D             +     FSP+ +  A+ T        + L+D +  +    
Sbjct: 132 LWLLKNDQFEKYLRITYHPSVDEYGSFSPDGKYFAFITDRLSGNRNIALLDLQAGKIT-V 190

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASYS 310
           +    S    PRFS +GKR L         +IY + L+  S     ++       +  + 
Sbjct: 191 LPVAGSSEYFPRFSPDGKRLLFQGSLHGFWNIYVMPLENYSKNIVLISAGNNPAYNPCWY 250

Query: 311 PDS------------------------------------------SQIVFESDREGKEQL 328
            D                                             I F   +E    +
Sbjct: 251 DDGTVLYVQDSEYGNRLLLSTIAKKRKQIEIPYPFEMVFSPTVYKDTIYFVGLKESDFGI 310

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y + S+G+    + ++   +  DP  SP G  +A++      + I V      ++  + +
Sbjct: 311 YALTSDGTVT--VVENTVFNEHDPAISPDGRYLAYSCNITGYYTIWVKDLFTQEKWCITQ 368

Query: 389 D--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           D   +   P +SP G+ + FS   +G+    ++ +
Sbjct: 369 DIPHDAFYPVFSPDGKVVAFSVY-EGNFEPDIWFV 402



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 52/256 (20%), Positives = 81/256 (31%), Gaps = 53/256 (20%)

Query: 218 RFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPK--RIGNFRSMILAPRFSSNGKR 271
            +SP  Q+  Y+ +  E     + +V L   + D+  K  RI    S+     FS +GK 
Sbjct: 106 SYSPKDQR-PYSDFVRECAHYPLEKVSLWLLKNDQFEKYLRITYHPSVDEYGSFSPDGKY 164

Query: 272 ALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                 +     +I  +DLQ+     L           +SPD  +++F+    G   +YV
Sbjct: 165 FAFITDRLSGNRNIALLDLQAGKITVLPVAGSSEYFPRFSPDGKRLLFQGSLHGFWNIYV 224

Query: 331 MQS-NGSDQKRISQDKEASYFDPVWSPQG------------------------------- 358
           M   N S    +        ++P W   G                               
Sbjct: 225 MPLENYSKNIVLISAGNNPAYNPCWYDDGTVLYVQDSEYGNRLLLSTIAKKRKQIEIPYP 284

Query: 359 -----------DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                      D I F       F I  +  DG+   +     N   P  SP GR L +S
Sbjct: 285 FEMVFSPTVYKDTIYFVGLKESDFGIYALTSDGTVTVVENTVFNEHDPAISPDGRYLAYS 344

Query: 408 RKKDGDTGSKLYSIDL 423
               G     ++  DL
Sbjct: 345 CNITGYYT--IWVKDL 358



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 53/139 (38%), Gaps = 8/139 (5%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           R+T    ++   S+SPD     F +DR  G   + ++         +     + YF P +
Sbjct: 145 RITYHPSVDEYGSFSPDGKYFAFITDRLSGNRNIALLDLQAGKITVLPVAGSSEYF-PRF 203

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
           SP G  + F       + I VM  +       L+   +N    P W   G  L     +D
Sbjct: 204 SPDGKRLLFQGSLHGFWNIYVMPLENYSKNIVLISAGNNPAYNPCWYDDGTVLYV---QD 260

Query: 412 GDTGSKLYSIDLNGRNETL 430
            + G++L    +  + + +
Sbjct: 261 SEYGNRLLLSTIAKKRKQI 279


>gi|153803128|ref|ZP_01957714.1| tricorn protease [Vibrio cholerae MZO-3]
 gi|124121347|gb|EAY40090.1| tricorn protease [Vibrio cholerae MZO-3]
          Length = 1084

 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 43/254 (16%)

Query: 211 DQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           D     P +      SP+ QK+A+             +          +         P 
Sbjct: 32  DSTQARPTWLRDIALSPDGQKIAFTYAGQ------IWLVPAQGGDAVALTESGVYSETPI 85

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S + +    +  +    D++ + +Q   + RLT     +I  ++S D  Q+ F S R G
Sbjct: 86  WSPDSQSIAFTADRYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLG 145

Query: 325 KE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            +             QLY + + G  ++R+      +  D   SP    I +T       
Sbjct: 146 DDKANANVKQGSFMAQLYSVPAAGGREQRVL---PIAISDLAISPSHSDILYTNQPSDEQ 202

Query: 367 -------SGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  S     I       G   ++       + P WS  G S+ +  ++ G     +
Sbjct: 203 PWRKGAVSDATRDIWQWSPRTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSF--NI 260

Query: 419 YSIDLNGRNETLIN 432
           +    +G     I 
Sbjct: 261 WQQRFDGSEPVQIT 274



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 71/205 (34%), Gaps = 30/205 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G++   +     A  I+ V  Q      LT +   + +  +SPDS  I F +DR 
Sbjct: 45  ALSPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRY 100

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------ 371
           G   ++++   G + +R++    A      +S  G  + F+                   
Sbjct: 101 GLGDVFILSIQGGESRRLTYHG-AKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFM 159

Query: 372 -AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYS 420
             +  +   G +E+ ++    +     SPS   ++++ +             D    ++ 
Sbjct: 160 AQLYSVPAAGGREQRVL-PIAISDLAISPSHSDILYTNQPSDEQPWRKGAVSDATRDIWQ 218

Query: 421 ID-LNGRNETLINTPAYASDPQWVG 444
                G++  +        +P W  
Sbjct: 219 WSPRTGKHTQITTFRGEDRNPVWSA 243



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 99/331 (29%), Gaps = 89/331 (26%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRID 247
           G + R        I +   FS + Q++ +++    D            + ++Y +     
Sbjct: 113 GESRRLTYHGAKDIPY--AFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAGG 170

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIYSVDLQSNATE 295
           R  + +      I     S +    L + Q             D   DI+    ++    
Sbjct: 171 REQRVL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGAVSDATRDIWQWSPRTGKHT 227

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------------ 343
           ++T     + +  +S D S + + S++ G   ++  + +GS+  +I+             
Sbjct: 228 QITTFRGEDRNPVWSADGSSMYYLSEQAGSFNIWQQRFDGSEPVQITDHQKLPVRFLSAS 287

Query: 344 ---DKEASYFDPVW--------------------SPQGDLIAFTKFSGEKF--------- 371
              D    +   +W                     P G           +          
Sbjct: 288 LQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEATEMVVAPNAAEV 347

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT---------G 415
                  + V+       + + +    +   ++S  G  LI++ +++G           G
Sbjct: 348 AIVARGDVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSYVNDG 407

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            K +S  L+   E ++ T      P +   +
Sbjct: 408 GKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 341 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDVSFSSDGYRLIYASERE 394

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   +                  LT    + I   YSP+  +IV+   RE +  L
Sbjct: 395 GSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDV-IQPLYSPNLKRIVY---RENRNTL 450

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + I     +     I ++K DGS+ 
Sbjct: 451 KVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEA 510

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNG 425
            + L +    + AP +S  G+ + +     G  D    +   D+ G
Sbjct: 511 PINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDMVVQYDVYG 556



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 99/286 (34%), Gaps = 41/286 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------KVAYATYDDEDILRVYLMDTR 245
           +     DG+    +T  +   +     S           ++       +   +V +   R
Sbjct: 260 IWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRR 319

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +   NF         + N     I  + D    +Y V L S  T+R+T+T    
Sbjct: 320 SAMPDGRHNVNFNLEATEMVVAPNAAEVAIVARGD----VYVVSLLSGLTQRITDTPEAE 375

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPV 353
              S+S D  ++++ S+REG   LY    N             ++  ++ +++     P+
Sbjct: 376 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQD--VIQPL 433

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIF 406
           +SP    I + +       + V   +  +   L++   L +         WSP    ++ 
Sbjct: 434 YSPNLKRIVYRENRNT---LKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVT 490

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGFM 446
             +   +   +L   D +     L  +      P +++D QWV ++
Sbjct: 491 RDRAMSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWL 536



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 19/174 (10%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+  +   ++ + Y+ D        +D   + +      ++ P +S N 
Sbjct: 379 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR +    ++    +   D++ + T  L +   +      ++S  +SPDS  IV   DR 
Sbjct: 439 KRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV-TRDRA 494

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                + +++ +GS+          S F P +S  G  + +   +     I  M
Sbjct: 495 MSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDM 548


>gi|325281418|ref|YP_004253960.1| peptidase S41 [Odoribacter splanchnicus DSM 20712]
 gi|324313227|gb|ADY33780.1| peptidase S41 [Odoribacter splanchnicus DSM 20712]
          Length = 1072

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 81/237 (34%), Gaps = 37/237 (15%)

Query: 228 YATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +   + + I+  Y  D           +++ +     + PR S +GK    + Q D   +
Sbjct: 27  FPHINGKQIVFSYAGDLYTVSDQGGTARKLTSDIGYEMFPRISPDGKYIAFTGQYDGNTE 86

Query: 284 IYSVDLQSNATERLT-------NTLFINISAS-----YSPDSSQIVFESDR----EGKEQ 327
           ++ +        RLT       + L   +  +     ++PDS  I+F + +    +   Q
Sbjct: 87  VFVIPSAGGIPRRLTYTATLNRDDLGDRMGPNNIVIGWTPDSKHILFRTRQFTFNDFTGQ 146

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-----------TKFSGEKFAIGVM 376
           L  + + G +   I            +SP G  +A+               G    I + 
Sbjct: 147 LMTVPAEGGEAVEIPLKNGGFA---SYSPDGKKLAYNYVFREFRTWKRYQGGMADDIRIY 203

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             D  Q + + ++      P WS  G  + F   +D      LY  +L+ +    + 
Sbjct: 204 DFDTHQSQKITDEIRQDIIPMWSADGNKIYFISDRDDIM--NLYVYNLSDKTTRQLT 258



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 58/331 (17%), Positives = 131/331 (39%), Gaps = 41/331 (12%)

Query: 142 KKFFSSPASWRKI-------AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           K++    A   +I       +  I+D+I Q I        ++I F+S+         +L 
Sbjct: 190 KRYQGGMADDIRIYDFDTHQSQKITDEIRQDIIPMWSADGNKIYFISDR----DDIMNLY 245

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY----------ATYDDEDILRVYLMDT 244
           V +      R LT ++D  +  P       ++ Y             +    + V + + 
Sbjct: 246 VYNLSDKTTRQLTFNKDYDIKFPAL--GGDQIVYEQGGILYKFDTRTEKASPIPVEIDND 303

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FI 303
           +    P+   +    I     + NG+R +++ + D    I+++  +S  T  LTN+    
Sbjct: 304 QNWARPEWK-DVSGQISRMDVAPNGERVVVAARGD----IFTLPAKSGITYNLTNSSNAN 358

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           + +  +SPD   I + SD+ G+  +++  +   ++K +++D +   FD  W+P    I +
Sbjct: 359 DRNPQWSPDGKWIAYISDKNGEFNIWLRDAFTGEEKMLTKDLKTYIFDLKWAPDSRSILW 418

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           ++         V   DG  E +       + +  WS   R + +   +       +   D
Sbjct: 419 SEKKNTLNLTQV--SDGKTEVIASSGVGPINSFNWSQDSRYITYI--QPEKEMDNIIIYD 474

Query: 423 LNGRNETL-------INTPAYASDPQWVGFM 446
            N + +         +++P ++ D +++ F+
Sbjct: 475 RNSKEKHQMTDGWYNVSSPNFSKDGKYLVFV 505



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 75/210 (35%), Gaps = 36/210 (17%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NGK+ + S   D    +Y+V  Q     +LT+ +   +    SPD   I F    +G  +
Sbjct: 31  NGKQIVFSYAGD----LYTVSDQGGTARKLTSDIGYEMFPRISPDGKYIAFTGQYDGNTE 86

Query: 328 LYVMQSNGSDQKRISQ------DKEASYFDPV-----WSPQGDLIAFT----KFSGEKFA 372
           ++V+ S G   +R++       D       P      W+P    I F      F+     
Sbjct: 87  VFVIPSAGGIPRRLTYTATLNRDDLGDRMGPNNIVIGWTPDSKHILFRTRQFTFNDFTGQ 146

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF---------SRKKDGDTGSKLYSIDL 423
           +  +  +G +   +    N    ++SP G+ L +          ++  G     +   D 
Sbjct: 147 LMTVPAEGGEAVEIP-LKNGGFASYSPDGKKLAYNYVFREFRTWKRYQGGMADDIRIYDF 205

Query: 424 NGRNETLINT-------PAYASDPQWVGFM 446
           +      I         P +++D   + F+
Sbjct: 206 DTHQSQKITDEIRQDIIPMWSADGNKIYFI 235



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 101/303 (33%), Gaps = 53/303 (17%)

Query: 177 ILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           I F   +    +      L  +   G   R LT S       PR SP+ + +A+    D 
Sbjct: 25  IRFPHINGKQIVFSYAGDLYTVSDQGGTARKLT-SDIGYEMFPRISPDGKYIAFTGQYDG 83

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMI-------LAPR-----FSSNGKRALISVQK---- 278
           +     +        P+R+    ++        + P      ++ + K  L   ++    
Sbjct: 84  NTEVFVI--PSAGGIPRRLTYTATLNRDDLGDRMGPNNIVIGWTPDSKHILFRTRQFTFN 141

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI----VFESDREGK-------EQ 327
           D    + +V  +      +   L     ASYSPD  ++    VF   R  K       + 
Sbjct: 142 DFTGQLMTVPAEGGEAVEI--PLKNGGFASYSPDGKKLAYNYVFREFRTWKRYQGGMADD 199

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +   +    ++I+ +       P+WS  G+ I F     +   + V        R L 
Sbjct: 200 IRIYDFDTHQSQKITDEIRQDII-PMWSADGNKIYFISDRDDIMNLYVYNLSDKTTRQLT 258

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD------ 439
             +D +++ P     G  +++      + G  LY  D   R E     P    +      
Sbjct: 259 FNKDYDIKFPALG--GDQIVY------EQGGILYKFDT--RTEKASPIPVEIDNDQNWAR 308

Query: 440 PQW 442
           P+W
Sbjct: 309 PEW 311



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 62/201 (30%), Gaps = 43/201 (21%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G  +   +  +   V    +  +  +         LT S +     P++SP+ + +A
Sbjct: 313 DVSGQISRMDVAPNGERVVVAARGDIFTLPAKSGITYNLTNSSNANDRNPQWSPDGKWIA 372

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-------- 279
           Y + D      ++L D           + ++ I   +++ + +  L S +K+        
Sbjct: 373 YIS-DKNGEFNIWLRDAFTGEEKMLTKDLKTYIFDLKWAPDSRSILWSEKKNTLNLTQVS 431

Query: 280 ----------------------------------EAMDIYSVDLQSNATERLTNTLFINI 305
                                             E  +I   D  S    ++T+  +   
Sbjct: 432 DGKTEVIASSGVGPINSFNWSQDSRYITYIQPEKEMDNIIIYDRNSKEKHQMTDGWYNVS 491

Query: 306 SASYSPDSSQIVFESDREGKE 326
           S ++S D   +VF S R    
Sbjct: 492 SPNFSKDGKYLVFVSARTFNP 512


>gi|289642645|ref|ZP_06474786.1| serine/threonine protein kinase [Frankia symbiont of Datisca
           glomerata]
 gi|289507554|gb|EFD28512.1| serine/threonine protein kinase [Frankia symbiont of Datisca
           glomerata]
          Length = 740

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 52/267 (19%), Positives = 91/267 (34%), Gaps = 25/267 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS- 258
           G   R                P ++ V Y   D    L     D      P       + 
Sbjct: 472 GQPQRLTVDDTKPAALPVIVGPQRKTVLYTVIDSSPSLVAIAADGSGAPMPLFTSGPAAE 531

Query: 259 MILAP----RFSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +++AP         G+  +I   +   D    +Y   +  ++  RL N        S+SP
Sbjct: 532 LVIAPDARASVDPTGRFVVIRAVRGPNDGLTGLYVAAVDGSSVRRL-NVPAGATDPSWSP 590

Query: 312 DSSQIVFESDREG--KEQLYVMQSN----GSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              +IVF     G     L+ + ++    G+   +++   E    DP WSP G  +AF +
Sbjct: 591 TGDRIVFFVGSGGVDGGALFTIDADPAAAGAKPVQLTPGTEGFDADPTWSPDGKKVAFRR 650

Query: 366 FSGEKF---AIGVMKKDGSQ--ERLLVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKLY 419
                     + VM         RL       Q PT+ +  G+ + F+ ++DG T  ++Y
Sbjct: 651 AFDPNLAETDVFVMDASPGATPLRLTEAPGRDQDPTFVAGDGKLIAFTSQRDGPTNREIY 710

Query: 420 SIDL----NGRNETLINTPAYASDPQW 442
                   +     L +     + P+W
Sbjct: 711 VTSATAPDDANARKLTSFRGDDATPRW 737



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 70/203 (34%), Gaps = 31/203 (15%)

Query: 268 NGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINISAS-----YSPDSSQIVF 318
           +    + S +++    IYS+    D +    +RLT     +   +       P    +++
Sbjct: 444 DDDTLVYSSEQEGRRAIYSLRVGPDGRPGQPQRLTVD---DTKPAALPVIVGPQRKTVLY 500

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--------GDLIAFTKFSG-- 368
               +    L  + ++GS              + V +P         G  +      G  
Sbjct: 501 TVI-DSSPSLVAIAADGSGAPMPLF-TSGPAAELVIAPDARASVDPTGRFVVIRAVRGPN 558

Query: 369 -EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN--- 424
                + V   DGS  R L   +    P+WSP+G  ++F     G  G  L++ID +   
Sbjct: 559 DGLTGLYVAAVDGSSVRRLNVPAGATDPSWSPTGDRIVFFVGSGGVDGGALFTIDADPAA 618

Query: 425 -GRNETLIN--TPAYASDPQWVG 444
            G     +   T  + +DP W  
Sbjct: 619 AGAKPVQLTPGTEGFDADPTWSP 641


>gi|298242082|ref|ZP_06965889.1| peptidase S41 [Ktedonobacter racemifer DSM 44963]
 gi|297555136|gb|EFH89000.1| peptidase S41 [Ktedonobacter racemifer DSM 44963]
          Length = 1119

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 71/188 (37%), Gaps = 19/188 (10%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              +   + D    ++ V  +    ERLT          +SPD + + F    EG  ++Y
Sbjct: 35  DYIVFVTEDD----LWLVSSEGGRAERLTAGQGRMSHPHFSPDGNWLAFVGREEGPGEVY 90

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG----EKFAIGVMKKDGSQERL 385
           VM + G   +R++ D   +     W+P G  I +   SG    +   I  +   G   + 
Sbjct: 91  VMPALGGPARRLTFDG-GTCTVLGWTPDGGAILYASSSGQFTAKYTVIYAISPAGGPPQQ 149

Query: 386 LVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           L       A ++ P G  +I         + R + G  G        +G  + L+N    
Sbjct: 150 LPV-GMANAISYGPEGGVVIGRNIEEPAYWKRYRGGTVGHLWCDTTGSGTFQRLLNIHGN 208

Query: 437 ASDPQWVG 444
            +DP WVG
Sbjct: 209 VADPCWVG 216



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 73/252 (28%), Gaps = 67/252 (26%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++  +G     LT  + ++   P FSP+   +A+    +E    VY+M   +    +
Sbjct: 44  DLWLVSSEGGRAERLTAGQGRM-SHPHFSPDGNWLAFVG-REEGPGEVYVM-PALGGPAR 100

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE----AMDIYSVDLQSNATERLTNTLFINIS- 306
           R+           ++ +G   L +    +       IY++       ++L   +   IS 
Sbjct: 101 RLTFDGGTCTVLGWTPDGGAILYASSSGQFTAKYTVIYAISPAGGPPQQLPVGMANAISY 160

Query: 307 ---------------------------------------------------ASYSPDSSQ 315
                                                                +     +
Sbjct: 161 GPEGGVVIGRNIEEPAYWKRYRGGTVGHLWCDTTGSGTFQRLLNIHGNVADPCWV--GKR 218

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           I F SD EG   +Y     G +  R +     +++    S  G+ +     +     + V
Sbjct: 219 IYFISDHEGVGNIYSCTPLGEELTRHTF--FDTFYARHLSTDGERLVLQSAAD----LYV 272

Query: 376 MKKDGSQERLLV 387
                +Q R L 
Sbjct: 273 FDPATNQVRQLT 284



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 56/150 (37%), Gaps = 7/150 (4%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDR 322
           + ++G R +          +  +D  S+   +L   +     I  +  P  + +   + R
Sbjct: 351 WLNDGWRLVAICDSPGRETLVIIDPASDNEYKLLPDIEFGRVIELTVCPVENIVAITNHR 410

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGS 381
              ++L V+         +   +    +D  WSP G  +A++   S +K AI +   +  
Sbjct: 411 ---QELIVVDLASGQHGVLDHSEHGRIYDLAWSPDGRWLAYSFACSAQKRAIKLGNLETG 467

Query: 382 QERLLVEDSNLQ-APTWSPSGRSLIFSRKK 410
           +     E      +P + P GR L F   +
Sbjct: 468 ETHFATEPILADVSPAFDPEGRYLYFLGYR 497



 Score = 43.5 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 78/262 (29%), Gaps = 44/262 (16%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  L V+D        L  S    +++  +SP+ + +AY+         + L +    
Sbjct: 408 NHRQELIVVDLASGQHGVLDHSEHGRIYDLAWSPDGRWLAYSFACSAQKRAIKLGNLETG 467

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRAL---------------ISVQKDEAMDIYSVDLQSN 292
                        ++P F   G+                          +  Y+V L+ +
Sbjct: 468 -ETHFATEPILADVSPAFDPEGRYLYFLGYRVFNPLSDNLQFEWSFPRGVQPYAVPLRKD 526

Query: 293 ------ATERLTNTLFINISASYSPDSSQIVFESDREGK--------------EQLYVMQ 332
                    RLT  L       + P+ +      D  G                ++Y+  
Sbjct: 527 VRSPFVTETRLTQDL--RRRPGFVPEVAPAATADDSNGTEPQPAPTTQPPNTSNRVYI-D 583

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLV 387
            +G  ++ ++     + +  + + +G ++          S  +    +   D   +RL  
Sbjct: 584 LDGITRRAVAFPTGEARYSGILAMRGRVLFLVHPLTGALSDGQSRGWIESFDIETQRLER 643

Query: 388 EDSNLQAPTWSPSGRSLIFSRK 409
              N+     S    +L++  +
Sbjct: 644 IFDNVNEAMLSRDHNTLLYRSR 665


>gi|189468186|ref|ZP_03016971.1| hypothetical protein BACINT_04582 [Bacteroides intestinalis DSM
           17393]
 gi|189436450|gb|EDV05435.1| hypothetical protein BACINT_04582 [Bacteroides intestinalis DSM
           17393]
          Length = 1066

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 74/212 (34%), Gaps = 36/212 (16%)

Query: 258 SMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           S    P +      S +G   +   + D    +Y V  +     +LT       +  +SP
Sbjct: 17  SYATTPLWMRDVQISPDGTEIVFCYKGD----LYKVPAKGGTATQLTTQDSYECTPIWSP 72

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGE 369
           D  QI F SDR G   +++M +NG   +R++    A+     ++P G  I F+       
Sbjct: 73  DGKQIAFASDRNGNFDIFIMSANGGTAQRLTT-HSATELPSAFTPDGKYILFSASIQDPA 131

Query: 370 KFAIG----------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT----- 414
             A+           V    G  E++L   +  +A  +  SG    +  +K G+      
Sbjct: 132 SSALFPSAAMTELYKVPSVGGRTEQVLATPA--EAVCFDKSGNRFFYQDRKGGENEWRKH 189

Query: 415 -----GSKLYSIDL-NGRNETLINTPAYASDP 440
                   ++  D   G +           +P
Sbjct: 190 HTSSITRDVWMYDAKTGSHTNFTQHAGEDRNP 221



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 61/355 (17%), Positives = 121/355 (34%), Gaps = 54/355 (15%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISD-----DIYQSITGEKGDFNSRILFVSESVV 185
           +D K   +   +        WRK  H  S       +Y + TG   +F          +V
Sbjct: 167 FD-KSGNRFFYQDRKGGENEWRK--HHTSSITRDVWMYDAKTGSHTNFTQHAGEDRNPIV 223

Query: 186 SGIIKNSLCVMDRDG-------------ANIRYLTPSRDQILFEPRFSPNQ------QKV 226
           S   +    + +R+G              +I+ +T  +   +     S N          
Sbjct: 224 SPDGQTVYFLSERNGGSFNVYSFPVSQPQSIKTITSFKTHPVRFLSMSNNGTLCYGYDGE 283

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y   +  +  ++ +   R D+             +   S +GK+   +V+     +++ 
Sbjct: 284 IYTQQESSNPRKINVEIIRDDQPQIAYLKHPDRATSATVSPDGKQIAFTVRG----EVFV 339

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM------QSNGSDQKR 340
                  T+++T+T       S++PD+  + + S+R G  Q+Y+         N  +   
Sbjct: 340 TSTDYTTTKQITHTAAEEDGLSFAPDNRTLAYASERSGNWQIYLAKIVREEDPNFPNATL 399

Query: 341 ISQD-----KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           I ++            P +SP G  +AF +       + V+  +  + R + + S   + 
Sbjct: 400 IKEEVLLPSTTVERSHPQFSPDGKELAFIEDRN---RLMVLNLETKKVRRITDGSTWYST 456

Query: 396 T------WSPSGRS--LIFSRKKDGD-TGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +      WSP  +   L F   K    +   L S   NG    L N+   +  P 
Sbjct: 457 SGGFDYAWSPDSKWFTLEFIGNKHDPYSDIGLVSAQGNGEIINLTNSGYSSGSPS 511



 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 82/231 (35%), Gaps = 36/231 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++ +      D+ +V            ++    S    P +S +GK+   +  +
Sbjct: 30  ISPDGTEIVFCY--KGDLYKV----PAKGGTATQLTTQDSYECTPIWSPDGKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
           +   DI+ +       +RLT      + ++++PD   I+F +                 +
Sbjct: 84  NGNFDIFIMSANGGTAQRLTTHSATELPSAFTPDGKYILFSASIQDPASSALFPSAAMTE 143

Query: 328 LYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEK------------FAIG 374
           LY + S G   ++ ++   EA  FD      G+   +    G +              + 
Sbjct: 144 LYKVPSVGGRTEQVLATPAEAVCFDKS----GNRFFYQDRKGGENEWRKHHTSSITRDVW 199

Query: 375 VMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +                  + P  SP G+++ F  +++G +   +YS  ++
Sbjct: 200 MYDAKTGSHTNFTQHAGEDRNPIVSPDGQTVYFLSERNGGS-FNVYSFPVS 249



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 58/340 (17%), Positives = 123/340 (36%), Gaps = 37/340 (10%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK     V   ++ V        K+   + A    ++    +      +   G+
Sbjct: 320 ATVSPDGKQIAFTVRGEVF-VTSTDYTTTKQITHTAAEEDGLSFAPDNRTLAYASERSGN 378

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +   +  +           +L            L PS       P+FSP+ +++A+    
Sbjct: 379 WQIYLAKIVREEDPNFPNATLI-------KEEVLLPSTTVERSHPQFSPDGKELAFI--- 428

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----RFSSNGKR--ALISVQK-DEAMDI 284
            ED  R+ +++    +  +RI +  +           +S + K         K D   DI
Sbjct: 429 -EDRNRLMVLNLET-KKVRRITDGSTWYSTSGGFDYAWSPDSKWFTLEFIGNKHDPYSDI 486

Query: 285 YSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG-----------KEQLYVMQ 332
             V  Q       LTN+ + + S S++ D + I+F ++R G              L  + 
Sbjct: 487 GLVSAQGNGEIINLTNSGYSSGSPSFALDGNAILFTTERYGMRAHASWGSLDDAMLVFLN 546

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            +  D+  +S++ +   +    S +  + A      +   + +   +    RL    SN+
Sbjct: 547 QDAYDKFSLSKE-DYELYKEANSDRKKVAAKDSSKVKDVVVELKNIEDRIVRLTPNSSNM 605

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +   S  G++L +      ++G  L+ +DLN +   L++
Sbjct: 606 GSTLISKDGKALYYLAST--ESGRNLWKMDLNKKETKLLH 643



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 80/211 (37%), Gaps = 32/211 (15%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  L  +   G     LT  +D     P +SP+ +++A+A+  + +   +++M +    
Sbjct: 41  YKGDLYKVPAKGGTATQLTT-QDSYECTPIWSPDGKQIAFASDRNGN-FDIFIM-SANGG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATERL 297
             +R+    +  L   F+ +GK  L S    +             ++Y V      TE++
Sbjct: 98  TAQRLTTHSATELPSAFTPDGKYILFSASIQDPASSALFPSAAMTELYKVPSVGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQ-------------LYVMQSNGSDQKRISQD 344
             T    +   +    ++  ++ DR+G E              +++  +        +Q 
Sbjct: 158 LATPAEAV--CFDKSGNRFFYQ-DRKGGENEWRKHHTSSITRDVWMYDAKTGSHTNFTQ- 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIG 374
                 +P+ SP G  + F ++ +G  F + 
Sbjct: 214 HAGEDRNPIVSPDGQTVYFLSERNGGSFNVY 244


>gi|254284774|ref|ZP_04959741.1| tricorn protease [Vibrio cholerae AM-19226]
 gi|150425559|gb|EDN17335.1| tricorn protease [Vibrio cholerae AM-19226]
          Length = 1084

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 43/254 (16%)

Query: 211 DQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           D     P +      SP+ QK+A+             +          +         P 
Sbjct: 32  DSTQARPTWLRDIALSPDGQKIAFTYAGQ------IWLVPAQGGDAVALTESGVYSETPI 85

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S + +    +  +    D++ + +Q   + RLT     +I  ++S D  Q+ F S R G
Sbjct: 86  WSPDSQSIAFTADRYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLG 145

Query: 325 KE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            +             QLY + + G  ++R+      +  D   SP    I +T       
Sbjct: 146 DDKANANVKQGSFMAQLYSVPAAGGREQRVL---PIAISDLAISPSHSDILYTNQPSDEQ 202

Query: 367 -------SGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  S     I       G   ++       + P WS  G S+ +  ++ G     +
Sbjct: 203 PWRKGAVSDATRDIWQWSPRTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSF--NI 260

Query: 419 YSIDLNGRNETLIN 432
           +    +G     I 
Sbjct: 261 WQQRFDGSEPVQIT 274



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 71/205 (34%), Gaps = 30/205 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G++   +     A  I+ V  Q      LT +   + +  +SPDS  I F +DR 
Sbjct: 45  ALSPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRY 100

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------ 371
           G   ++++   G + +R++    A      +S  G  + F+                   
Sbjct: 101 GLGDVFILSIQGGESRRLTYHG-AKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFM 159

Query: 372 -AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYS 420
             +  +   G +E+ ++    +     SPS   ++++ +             D    ++ 
Sbjct: 160 AQLYSVPAAGGREQRVL-PIAISDLAISPSHSDILYTNQPSDEQPWRKGAVSDATRDIWQ 218

Query: 421 ID-LNGRNETLINTPAYASDPQWVG 444
                G++  +        +P W  
Sbjct: 219 WSPRTGKHTQITTFRGEDRNPVWSA 243



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 99/331 (29%), Gaps = 89/331 (26%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRID 247
           G + R        I +   FS + Q++ +++    D            + ++Y +     
Sbjct: 113 GESRRLTYHGAKDIPY--AFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAGG 170

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIYSVDLQSNATE 295
           R  + +      I     S +    L + Q             D   DI+    ++    
Sbjct: 171 REQRVL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGAVSDATRDIWQWSPRTGKHT 227

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------------ 343
           ++T     + +  +S D S + + S++ G   ++  + +GS+  +I+             
Sbjct: 228 QITTFRGEDRNPVWSADGSSMYYLSEQAGSFNIWQQRFDGSEPVQITDHQKLPVRFLSAS 287

Query: 344 ---DKEASYFDPVW--------------------SPQGDLIAFTKFSGEKF--------- 371
              D    +   +W                     P G           +          
Sbjct: 288 LQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEATEMVVAPNAAEV 347

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT---------G 415
                  + V+       + + +    +   ++S  G  LI++ +++G           G
Sbjct: 348 AIVARGDVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSYVNDG 407

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            K +S  L+   E ++ T      P +   +
Sbjct: 408 GKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 341 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDVSFSSDGYRLIYASERE 394

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   +                  LT    + I   YSP+  +IV+   RE +  L
Sbjct: 395 GSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDV-IQPLYSPNLKRIVY---RENRNTL 450

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + I     +     I ++K DGS+ 
Sbjct: 451 KVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEA 510

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNG 425
            + L +    + AP +S  G+ + +     G  D    +   D+ G
Sbjct: 511 PINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDMVVQYDVYG 556



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 99/286 (34%), Gaps = 41/286 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------KVAYATYDDEDILRVYLMDTR 245
           +     DG+    +T  +   +     S           ++       +   +V +   R
Sbjct: 260 IWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRR 319

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +   NF         + N     I  + D    +Y V L S  T+R+T+T    
Sbjct: 320 SAMPDGRHNVNFNLEATEMVVAPNAAEVAIVARGD----VYVVSLLSGLTQRITDTPEAE 375

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPV 353
              S+S D  ++++ S+REG   LY    N             ++  ++ +++     P+
Sbjct: 376 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQD--VIQPL 433

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIF 406
           +SP    I + +       + V   +  +   L++   L +         WSP    ++ 
Sbjct: 434 YSPNLKRIVYRENRNT---LKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVT 490

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGFM 446
             +   +   +L   D +     L  +      P +++D QWV ++
Sbjct: 491 RDRAMSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWL 536



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 19/174 (10%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+  +   ++ + Y+ D        +D   + +      ++ P +S N 
Sbjct: 379 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR +    ++    +   D++ + T  L +   +      ++S  +SPDS  IV   DR 
Sbjct: 439 KRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV-TRDRA 494

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                + +++ +GS+          S F P +S  G  + +   +     I  M
Sbjct: 495 MSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDM 548


>gi|297579812|ref|ZP_06941739.1| tricorn protease [Vibrio cholerae RC385]
 gi|297535458|gb|EFH74292.1| tricorn protease [Vibrio cholerae RC385]
          Length = 1084

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 43/254 (16%)

Query: 211 DQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           D     P +      SP+ QK+A+             +          +         P 
Sbjct: 32  DSTQARPTWLRDIALSPDGQKIAFTYAGQ------IWLVPAQGGDAVALTESGVYSETPI 85

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S + +    +  +    D++ + +Q   + RLT     +I  ++S D  Q+ F S R G
Sbjct: 86  WSPDSQSIAFTADRYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLG 145

Query: 325 KE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            +             QLY + + G  ++R+      +  D   SP    I +T       
Sbjct: 146 DDKANANVKQGSFMAQLYSVPAAGGREQRVL---PIAISDLAISPSHSDILYTNQPSDEQ 202

Query: 367 -------SGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  S     I       G   ++       + P WS  G S+ +  ++ G     +
Sbjct: 203 PWRKGALSDATRDIWQWSPRTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSF--NI 260

Query: 419 YSIDLNGRNETLIN 432
           +    +G     I 
Sbjct: 261 WQQRFDGSEPVQIT 274



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 71/205 (34%), Gaps = 30/205 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G++   +     A  I+ V  Q      LT +   + +  +SPDS  I F +DR 
Sbjct: 45  ALSPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRY 100

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------ 371
           G   ++++   G + +R++    A      +S  G  + F+                   
Sbjct: 101 GLGDVFILSIQGGESRRLTYHG-AKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFM 159

Query: 372 -AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYS 420
             +  +   G +E+ ++    +     SPS   ++++ +             D    ++ 
Sbjct: 160 AQLYSVPAAGGREQRVL-PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQ 218

Query: 421 ID-LNGRNETLINTPAYASDPQWVG 444
                G++  +        +P W  
Sbjct: 219 WSPRTGKHTQITTFRGEDRNPVWSA 243



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/335 (12%), Positives = 100/335 (29%), Gaps = 97/335 (28%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRID 247
           G + R        I +   FS + Q++ +++    D            + ++Y +     
Sbjct: 113 GESRRLTYHGAKDIPY--AFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAGG 170

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIYSVDLQSNATE 295
           R  + +      I     S +    L + Q             D   DI+    ++    
Sbjct: 171 REQRVL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQWSPRTGKHT 227

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------------ 343
           ++T     + +  +S D S + + S++ G   ++  + +GS+  +I+             
Sbjct: 228 QITTFRGEDRNPVWSADGSSMYYLSEQAGSFNIWQQRFDGSEPVQITDHQKLPVRFLSAS 287

Query: 344 ---DKEASYFDPVW--------------------SPQGDL-------------------I 361
              D    +   +W                     P G                     +
Sbjct: 288 LQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHHVNFNLEATEMVVAPNAAEV 347

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT------ 414
           A          + V+       + + +    +   ++S  G  LI++ +++G        
Sbjct: 348 AIVARGD----VYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSY 403

Query: 415 ---GSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
              G K +S  L+   E ++ T      P +   +
Sbjct: 404 VNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 341 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDVSFSSDGYRLIYASERE 394

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   +                  LT    + I   YSP+  +IV+   RE +  L
Sbjct: 395 GSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDV-IQPLYSPNLKRIVY---RENRNTL 450

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + I     +     I ++K DGS+ 
Sbjct: 451 KVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEA 510

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNG 425
            + L +    + AP +S  G+ + +     G  D    +   D+ G
Sbjct: 511 PINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDMVVQYDVYG 556



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 99/286 (34%), Gaps = 41/286 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------KVAYATYDDEDILRVYLMDTR 245
           +     DG+    +T  +   +     S           ++       +   +V +   R
Sbjct: 260 IWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRR 319

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +   NF         + N     I  + D    +Y V L S  T+R+T+T    
Sbjct: 320 SAMPDGRHHVNFNLEATEMVVAPNAAEVAIVARGD----VYVVSLLSGLTQRITDTPEAE 375

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPV 353
              S+S D  ++++ S+REG   LY    N             ++  ++ +++     P+
Sbjct: 376 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQD--VIQPL 433

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIF 406
           +SP    I + +       + V   +  +   L++   L +         WSP    ++ 
Sbjct: 434 YSPNLKRIVYRENRNT---LKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVT 490

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGFM 446
             +   +   +L   D +     L  +      P +++D QWV ++
Sbjct: 491 RDRAMSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWL 536



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 19/174 (10%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+  +   ++ + Y+ D        +D   + +      ++ P +S N 
Sbjct: 379 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR +    ++    +   D++ + T  L +   +      ++S  +SPDS  IV   DR 
Sbjct: 439 KRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV-TRDRA 494

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                + +++ +GS+          S F P +S  G  + +   +     I  M
Sbjct: 495 MSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDM 548


>gi|229527963|ref|ZP_04417354.1| protease-related protein [Vibrio cholerae 12129(1)]
 gi|229334325|gb|EEN99810.1| protease-related protein [Vibrio cholerae 12129(1)]
          Length = 1084

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 43/254 (16%)

Query: 211 DQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           D     P +      SP+ QK+A+             +          +         P 
Sbjct: 32  DSTQARPTWLRDIALSPDGQKIAFTYAGQ------IWLVPAQGGDAVALTESGVYSETPI 85

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S + +    +  +    D++ + +Q   + RLT     +I  ++S D  Q+ F S R G
Sbjct: 86  WSPDSQSIAFTADRYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLG 145

Query: 325 KE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            +             QLY + + G  ++R+      +  D   SP    I +T       
Sbjct: 146 DDKANANVKQGSFMAQLYSVPAAGGREQRVL---PIAISDLAISPSHSDILYTNQPSDEQ 202

Query: 367 -------SGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  S     I       G   ++       + P WS  G S+ +  ++ G     +
Sbjct: 203 PWRKGAVSDATRDIWQWSPRTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSF--NI 260

Query: 419 YSIDLNGRNETLIN 432
           +    +G     I 
Sbjct: 261 WQQRFDGSEPVQIT 274



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 71/205 (34%), Gaps = 30/205 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G++   +     A  I+ V  Q      LT +   + +  +SPDS  I F +DR 
Sbjct: 45  ALSPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRY 100

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------ 371
           G   ++++   G + +R++    A      +S  G  + F+                   
Sbjct: 101 GLGDVFILSIQGGESRRLTYHG-AKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFM 159

Query: 372 -AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYS 420
             +  +   G +E+ ++    +     SPS   ++++ +             D    ++ 
Sbjct: 160 AQLYSVPAAGGREQRVL-PIAISDLAISPSHSDILYTNQPSDEQPWRKGAVSDATRDIWQ 218

Query: 421 ID-LNGRNETLINTPAYASDPQWVG 444
                G++  +        +P W  
Sbjct: 219 WSPRTGKHTQITTFRGEDRNPVWSA 243



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 99/331 (29%), Gaps = 89/331 (26%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRID 247
           G + R        I +   FS + Q++ +++    D            + ++Y +     
Sbjct: 113 GESRRLTYHGAKDIPY--AFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAGG 170

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIYSVDLQSNATE 295
           R  + +      I     S +    L + Q             D   DI+    ++    
Sbjct: 171 REQRVL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGAVSDATRDIWQWSPRTGKHT 227

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------------ 343
           ++T     + +  +S D S + + S++ G   ++  + +GS+  +I+             
Sbjct: 228 QITTFRGEDRNPVWSADGSSMYYLSEQAGSFNIWQQRFDGSEPVQITDHQKLPVRFLSAS 287

Query: 344 ---DKEASYFDPVW--------------------SPQGDLIAFTKFSGEKF--------- 371
              D    +   +W                     P G           +          
Sbjct: 288 LQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEATEMVVAPNAAEV 347

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT---------G 415
                  + V+       + + +    +   ++S  G  LI++ +++G           G
Sbjct: 348 AIVARGDVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSYVNDG 407

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            K +S  L+   E ++ T      P +   +
Sbjct: 408 GKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 341 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDVSFSSDGYRLIYASERE 394

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   +                  LT    + I   YSP+  +IV+   RE +  L
Sbjct: 395 GSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDV-IQPLYSPNLKRIVY---RENRNTL 450

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + I     +     I ++K DGS+ 
Sbjct: 451 KVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEA 510

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNG 425
            + L +    + AP +S  G+ + +     G  D    +   D+ G
Sbjct: 511 PINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDMVVQYDVYG 556



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 99/286 (34%), Gaps = 41/286 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------KVAYATYDDEDILRVYLMDTR 245
           +     DG+    +T  +   +     S           ++       +   +V +   R
Sbjct: 260 IWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRR 319

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +   NF         + N     I  + D    +Y V L S  T+R+T+T    
Sbjct: 320 SAMPDGRHNVNFNLEATEMVVAPNAAEVAIVARGD----VYVVSLLSGLTQRITDTPEAE 375

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPV 353
              S+S D  ++++ S+REG   LY    N             ++  ++ +++     P+
Sbjct: 376 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQD--VIQPL 433

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIF 406
           +SP    I + +       + V   +  +   L++   L +         WSP    ++ 
Sbjct: 434 YSPNLKRIVYRENRNT---LKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVT 490

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGFM 446
             +   +   +L   D +     L  +      P +++D QWV ++
Sbjct: 491 RDRAMSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWL 536



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 19/174 (10%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+  +   ++ + Y+ D        +D   + +      ++ P +S N 
Sbjct: 379 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR +    ++    +   D++ + T  L +   +      ++S  +SPDS  IV   DR 
Sbjct: 439 KRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV-TRDRA 494

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                + +++ +GS+          S F P +S  G  + +   +     I  M
Sbjct: 495 MSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDM 548


>gi|297181014|gb|ADI17215.1| periplasmic component of the tol biopolymer transport system
           [uncultured delta proteobacterium HF0070_10I02]
          Length = 1070

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 58/255 (22%), Positives = 96/255 (37%), Gaps = 13/255 (5%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +  +G     L          P +SP+  K+ ++  D  +   + L D   D   +    
Sbjct: 271 VKSNGETPAKLMSDGISTCMGPTWSPDGTKLLFSCVDPVEGSAILLRDADSDAEAEPEAL 330

Query: 256 FRSMILAPRFS--SNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISAS 308
            +    A  FS  S+GK    S        +   D+Y   L   ++  LT         +
Sbjct: 331 IKG-AFAKNFSWRSDGKAFFFSATHTVDRFNLYDDVYFYQLGRKSSTLLTRGK-RARHPA 388

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            SPD   ++  +++  + QL  M  +   +     D       P +SP G  +A +K+  
Sbjct: 389 LSPDGKDLLVVTNKVQQNQLARMTIDQQIETLTELDGHEQIATPQFSPDGRYVAVSKWQD 448

Query: 369 EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            +  I +   +G   R +V   S+ Q PTWS  GR L FS  + G     LY+I+L    
Sbjct: 449 GERDIWIYTAEGEPYRQIVSVGSHDQDPTWSADGRWLYFSSDRTG--IFNLYAIELESEK 506

Query: 428 E-TLINTPAYASDPQ 441
              + N    A  P 
Sbjct: 507 LFQITNVLGGAFHPA 521



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 71/206 (34%), Gaps = 6/206 (2%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
               + +  F S +           V             +R +    P  SP+ + +   
Sbjct: 340 SWRSDGKAFFFSATHTVDRFNLYDDVYFYQLGRKSSTLLTRGKRARHPALSPDGKDLLVV 399

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSV 287
           T     + +  L    ID+  + +        I  P+FS +G+   +S  +D   DI+  
Sbjct: 400 T---NKVQQNQLARMTIDQQIETLTELDGHEQIATPQFSPDGRYVAVSKWQDGERDIWIY 456

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             +     ++ +    +   ++S D   + F SDR G   LY ++       +I+     
Sbjct: 457 TAEGEPYRQIVSVGSHDQDPTWSADGRWLYFSSDRTGIFNLYAIELESEKLFQITNVLGG 516

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAI 373
           + F P   P    IAF  FS     I
Sbjct: 517 A-FHPAPHPDAKRIAFESFSHNGMDI 541



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 94/290 (32%), Gaps = 9/290 (3%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           GK+  S  ++    A  +SD I   +        +++LF     V G     L   D D 
Sbjct: 265 GKQAESVKSNGETPAKLMSDGISTCMGPTWSPDGTKLLFSCVDPVEGSA-ILLRDADSD- 322

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY--LMDTRIDRAPKRIGNFRS 258
           A        +        +  + +   ++     D   +Y  +   ++ R    +     
Sbjct: 323 AEAEPEALIKGAFAKNFSWRSDGKAFFFSATHTVDRFNLYDDVYFYQLGRKSSTLLTRGK 382

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQI 316
               P  S +GK  L+   K +   +  + +     E LT         +  +SPD   +
Sbjct: 383 RARHPALSPDGKDLLVVTNKVQQNQLARMTID-QQIETLTELDGHEQIATPQFSPDGRYV 441

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                ++G+  +++  + G   ++I         DP WS  G  + F+      F +  +
Sbjct: 442 AVSKWQDGERDIWIYTAEGEPYRQIVSVGSHDQ-DPTWSADGRWLYFSSDRTGIFNLYAI 500

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           + +  +   +         P   P  + + F             S+  +G
Sbjct: 501 ELESEKLFQITNVLGGAFHPAPHPDAKRIAFESFSHNGMDIVEASLGRDG 550



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 95/259 (36%), Gaps = 33/259 (12%)

Query: 215 FEPRFSPN----QQKVA------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           + P + P      Q++        A+ D+    +   + +  +   K + +  S  + P 
Sbjct: 234 WIPYWLPTKRVFGQRLVPLYRGWKASLDERYGKQAESVKSNGETPAKLMSDGISTCMGPT 293

Query: 265 FSSNGKRALIS-VQKDEAMDIYSVDLQS---NATERLTNTLFINISASYSPDSSQIVFES 320
           +S +G + L S V   E   I   D  S      E L    F   + S+  D     F +
Sbjct: 294 WSPDGTKLLFSCVDPVEGSAILLRDADSDAEAEPEALIKGAFAK-NFSWRSDGKAFFFSA 352

Query: 321 ----DR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
               DR    + +Y  Q        +++ K A +  P  SP G  +       ++  +  
Sbjct: 353 THTVDRFNLYDDVYFYQLGRKSSTLLTRGKRARH--PALSPDGKDLLVVTNKVQQNQLAR 410

Query: 376 MKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-- 431
           M  D   E L   D + Q   P +SP GR +  S+ +DG+    ++     G     I  
Sbjct: 411 MTIDQQIETLTELDGHEQIATPQFSPDGRYVAVSKWQDGER--DIWIYTAEGEPYRQIVS 468

Query: 432 -----NTPAYASDPQWVGF 445
                  P +++D +W+ F
Sbjct: 469 VGSHDQDPTWSADGRWLYF 487



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 67/170 (39%), Gaps = 2/170 (1%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V + + +N L  M  D            + +  P+FSP+ + VA + +  +D  R   + 
Sbjct: 399 VTNKVQQNQLARMTIDQQIETLTELDGHEQIATPQFSPDGRYVAVSKW--QDGERDIWIY 456

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T      ++I +  S    P +S++G+    S  +    ++Y+++L+S    ++TN L  
Sbjct: 457 TAEGEPYRQIVSVGSHDQDPTWSADGRWLYFSSDRTGIFNLYAIELESEKLFQITNVLGG 516

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
               +  PD+ +I FES       +            +     A  F   
Sbjct: 517 AFHPAPHPDAKRIAFESFSHNGMDIVEASLGRDGWSEVGLVPSADTFAGS 566


>gi|309791760|ref|ZP_07686249.1| WD40 domain-containing protein [Oscillochloris trichoides DG6]
 gi|308226203|gb|EFO79942.1| WD40 domain-containing protein [Oscillochloris trichoides DG6]
          Length = 322

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 98/255 (38%), Gaps = 29/255 (11%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----------DILRVYLMDT 244
           +    G+  + L    D   ++P  +P+ +++AY   D+                 L   
Sbjct: 40  IWQWRGSAAQALL--GDGNAWQPALAPDGRRIAYVRRDNSFSDVLLADASGAPLGQLTTN 97

Query: 245 RIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQK---------DEAMDIYSVDLQSNA 293
              + P  +        A  P ++  G R +++ Q          D  + ++ + +    
Sbjct: 98  GSRQPPNSLARVYESTWAFYPTWAPTGDRLVVTGQAVPPSGDPPVDANLGLFELSVAGGY 157

Query: 294 TERLTNTLFINISAS-YSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKEASY 349
              L     + +  S Y PD  +++F       +G++QLY++  +    +  +     SY
Sbjct: 158 QPMLYAAPNVQVGRSLYLPDGQRLLFVRSPNSADGQQQLYLLDLDTGAAEPFAAAPSPSY 217

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSR 408
            DP  SP G  +AF    G+   +  +   G    L L +  + +AP +SP GR + F  
Sbjct: 218 -DPAISPDGRWLAFAAQDGDGTDLFALPLAGGGTPLRLSDIGSARAPAFSPDGRQIAFLA 276

Query: 409 KKDGDTGSKLYSIDL 423
              G+ G  L+  DL
Sbjct: 277 IAPGEGGFDLWVADL 291



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 75/225 (33%), Gaps = 36/225 (16%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF------------- 302
                  P  + +G+R     + +   D+   D       +LT                 
Sbjct: 53  GDGNAWQPALAPDGRRIAYVRRDNSFSDVLLADASGAPLGQLTTNGSRQPPNSLARVYES 112

Query: 303 -INISASYSPDSSQIVFESD---REGKE------QLYVMQSNGSDQKRISQDKEASYFDP 352
                 +++P   ++V         G         L+ +   G  Q  +           
Sbjct: 113 TWAFYPTWAPTGDRLVVTGQAVPPSGDPPVDANLGLFELSVAGGYQPMLYAAPNVQVGRS 172

Query: 353 VWSPQGDLIAFTKF---SGEKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           ++ P G  + F +    +  +  + ++  D G+ E      S    P  SP GR L F+ 
Sbjct: 173 LYLPDGQRLLFVRSPNSADGQQQLYLLDLDTGAAEPFAAAPSPSYDPAISPDGRWLAFAA 232

Query: 409 KKDGDTGSKLYSIDLNGRNETL-------INTPAYASDPQWVGFM 446
            +DGD G+ L+++ L G    L          PA++ D + + F+
Sbjct: 233 -QDGD-GTDLFALPLAGGGTPLRLSDIGSARAPAFSPDGRQIAFL 275



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 53/137 (38%), Gaps = 7/137 (5%)

Query: 221 PNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           P+ Q++ +    +      ++YL+D     A +      S    P  S +G+    + Q 
Sbjct: 176 PDGQRLLFVRSPNSADGQQQLYLLDLDTGAA-EPFAAAPSPSYDPAISPDGRWLAFAAQD 234

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--ESDREGKEQLYVMQS--N 334
            +  D++++ L    T    + +    + ++SPD  QI F   +  EG   L+V      
Sbjct: 235 GDGTDLFALPLAGGGTPLRLSDIGSARAPAFSPDGRQIAFLAIAPGEGGFDLWVADLIEE 294

Query: 335 GSDQKRISQDKEASYFD 351
               +  +  +  + + 
Sbjct: 295 AGGLRATTPRRLTNAWH 311



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 75/216 (34%), Gaps = 26/216 (12%)

Query: 100 FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS 159
           +  W   G +++VTG+ +    D         D      +               A  + 
Sbjct: 117 YPTWAPTGDRLVVTGQAVPPSGDPP------VDANLG--LFELSVAGGYQPMLYAAPNV- 167

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
             + +S+    G    R+LFV  S  S   +  L ++D D         +     ++P  
Sbjct: 168 -QVGRSLYLPDG---QRLLFV-RSPNSADGQQQLYLLDLD-TGAAEPFAAAPSPSYDPAI 221

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQ 277
           SP+ + +A+A  D  D   ++ +       P R+ +      AP FS +G++        
Sbjct: 222 SPDGRWLAFAAQD-GDGTDLFALPLAGGGTPLRLSDI-GSARAPAFSPDGRQIAFLAIAP 279

Query: 278 KDEAMDIYSVDL---QSN----ATERLTNTLFINIS 306
            +   D++  DL             RLTN   ++  
Sbjct: 280 GEGGFDLWVADLIEEAGGLRATTPRRLTNAWHLDAD 315


>gi|198274139|ref|ZP_03206671.1| hypothetical protein BACPLE_00276 [Bacteroides plebeius DSM 17135]
 gi|198273217|gb|EDY97486.1| hypothetical protein BACPLE_00276 [Bacteroides plebeius DSM 17135]
          Length = 1084

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 87/247 (35%), Gaps = 35/247 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R SP+ +++ +      DI +V    +       ++    S   +P +S +GK+   +  
Sbjct: 30  RISPDGKEILFCY--KGDIYKV----SAKGGEAVQLTTQESYESSPVWSPDGKQIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKE 326
           +    D++ +     +  RLT      I ++++PD   IVF +                 
Sbjct: 84  RFGNTDVFVMPANGGSARRLTTNSASEIPSAFTPDGKFIVFSASIQDPASSALFPTSAMT 143

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIG 374
           +LY + + G   ++I     A       +  GD   +               S     + 
Sbjct: 144 ELYKVSAEGGKTEQIL-GTPAEMVCFNVA--GDKFLYQDRKGFEDEWRKHHTSSITRDVW 200

Query: 375 VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +      +   L +     + P  S  G+ + F  +++      +YS  L+   E +   
Sbjct: 201 MYDMASGKHTNLTKRAGEDRNPVLSSDGKEVFFLSERN-KGSFNVYSFPLD-NPEQVKPL 258

Query: 434 PAYASDP 440
            ++++ P
Sbjct: 259 TSFSTHP 265



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 107/263 (40%), Gaps = 34/263 (12%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +R+L+   D  L    ++ N +   Y         +V +  TR D+      ++    
Sbjct: 264 HPVRFLSLGGDGTLC---YTYNGE--IYTQKQGGKPSKVNVSLTRDDQEISVTLSYTRGA 318

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                S +GK+    V+     +++   ++   T+++T+T       S+  D+  +V+ S
Sbjct: 319 SEAVASPDGKQVAFIVRG----EVFVTSVEYGTTKQITHTPEAEEGLSFGADNRTLVYAS 374

Query: 321 DREGKEQLYVMQSNGSD-----------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +R+G  QLY  +    +           ++ +   K      P +SP G  +AF +   +
Sbjct: 375 ERDGNWQLYKAEIERKEDLNFPNATLIKEEVLLPSKTVERMYPKFSPDGKEVAFIE---D 431

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFSRKKDGDTGSKLYSI 421
           +  + V+  + ++ R + + S   +        WSP G+   L F   K  D  + +  +
Sbjct: 432 RIRLKVLNLETNKVRQITDGSTWYSLSGGFNYAWSPDGKWFTLEFIGNKH-DPYTDIALV 490

Query: 422 DLNGRNE--TLINTPAYASDPQW 442
             +G+ E   L N+   +S P+W
Sbjct: 491 SADGKGELVNLTNSGYTSSSPKW 513



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 81/221 (36%), Gaps = 30/221 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ ++VA+    +     V++         K+I +         F ++ +  + + ++D
Sbjct: 324 SPDGKQVAFIVRGE-----VFVTSVEYGT-TKQITHTPEAEEGLSFGADNRTLVYASERD 377

Query: 280 EAMDIYSVDLQSNATERLTNTLFINIS------------ASYSPDSSQIVFESDREGKEQ 327
               +Y  +++        N   I                 +SPD  ++ F  DR    +
Sbjct: 378 GNWQLYKAEIERKEDLNFPNATLIKEEVLLPSKTVERMYPKFSPDGKEVAFIEDRI---R 434

Query: 328 LYVMQSNGSDQKRISQDKEASY----FDPVWSPQGDL--IAFTKFSGEKF-AIGVMKKDG 380
           L V+    +  ++I+           F+  WSP G    + F     + +  I ++  DG
Sbjct: 435 LKVLNLETNKVRQITDGSTWYSLSGGFNYAWSPDGKWFTLEFIGNKHDPYTDIALVSADG 494

Query: 381 SQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             E   L        +P W+  G +++F+ ++ G      +
Sbjct: 495 KGELVNLTNSGYTSSSPKWTMDGNAILFTTERYGMRNHASW 535



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/304 (14%), Positives = 112/304 (36%), Gaps = 58/304 (19%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT  ++     P +SP+ +++A+A+    +   V++M      
Sbjct: 42  YKGDIYKVSAKGGEAVQLTT-QESYESSPVWSPDGKQIAFASDRFGNT-DVFVMPAN-GG 98

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-----------AMDIYSVDLQSNATERL 297
           + +R+    +  +   F+ +GK  + S    +             ++Y V  +   TE++
Sbjct: 99  SARRLTTNSASEIPSAFTPDGKFIVFSASIQDPASSALFPTSAMTELYKVSAEGGKTEQI 158

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T    +   ++    + +++ DR+G                +++          +++ 
Sbjct: 159 LGTPAEMV--CFNVAGDKFLYQ-DRKGFEDEWRKHHTSSITRDVWMYDMASGKHTNLTK- 214

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT------- 396
           +     +PV S  G  + F ++ +   F +     D + E++    S    P        
Sbjct: 215 RAGEDRNPVLSSDGKEVFFLSERNKGSFNVYSFPLD-NPEQVKPLTSFSTHPVRFLSLGG 273

Query: 397 -----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY---------ASDPQW 442
                ++ +G   I+++K+ G       ++ L   ++ +  T +Y         + D + 
Sbjct: 274 DGTLCYTYNGE--IYTQKQGGKPSK--VNVSLTRDDQEISVTLSYTRGASEAVASPDGKQ 329

Query: 443 VGFM 446
           V F+
Sbjct: 330 VAFI 333



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 14/128 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-- 263
           L PS+      P+FSP+ ++VA+     ED +R+ +++   ++  ++I +  +       
Sbjct: 406 LLPSKTVERMYPKFSPDGKEVAFI----EDRIRLKVLNLETNK-VRQITDGSTWYSLSGG 460

Query: 264 ---RFSSNGKR--ALISVQK-DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQI 316
               +S +GK         K D   DI  V          LTN+ + + S  ++ D + I
Sbjct: 461 FNYAWSPDGKWFTLEFIGNKHDPYTDIALVSADGKGELVNLTNSGYTSSSPKWTMDGNAI 520

Query: 317 VFESDREG 324
           +F ++R G
Sbjct: 521 LFTTERYG 528



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 7/48 (14%)

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
           SP G+ ++F  K        +Y +   G     L    +Y S P W  
Sbjct: 32  SPDGKEILFCYK------GDIYKVSAKGGEAVQLTTQESYESSPVWSP 73


>gi|51892094|ref|YP_074785.1| acylaminoacyl-peptidase [Symbiobacterium thermophilum IAM 14863]
 gi|51855783|dbj|BAD39941.1| acylaminoacyl-peptidase [Symbiobacterium thermophilum IAM 14863]
          Length = 739

 Score =  110 bits (274), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 78/240 (32%), Gaps = 26/240 (10%)

Query: 214 LFEPRFSPNQQKVAYATYD----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           + +P+ SP+ + VA+         ++      M       P           +PR+S +G
Sbjct: 34  VSDPQISPDGEVVAFVRTHIDPESKEPRSRIWMAPAAGGEPVPFTQGPKNDTSPRWSPDG 93

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-----DREG 324
           +       +     I+ +D       +LT          +SPD   I F S     DR  
Sbjct: 94  RTLAFVSDRGGDRQIWLIDRHGGEARQLTQMRHGAGDPVWSPDGRYIAFTSAVGPEDRRE 153

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE- 383
                   ++   +++ ++D+  ++    W      I           I V+      E 
Sbjct: 154 LLTRAKTDADKKAEEKKAKDEARTFTIMRWRSDAAGI----RPERWQQIWVVPVPRHGEP 209

Query: 384 -----RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                ++   + +    TWSP GR + F   +  D   +L       R+  +   P   S
Sbjct: 210 MPKPVQVTWGNYDHGGATWSPDGRYIAFGANRTEDESLRL-------RDIFITPVPGEDS 262



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/363 (13%), Positives = 98/363 (26%), Gaps = 122/363 (33%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S   ++ + +    G      T         PR+SP+ + +A+ + D     +++L+D R
Sbjct: 57  SKEPRSRIWMAPAAGGEPVPFTQGPKN-DTSPRWSPDGRTLAFVS-DRGGDRQIWLID-R 113

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------------------- 277
                +++   R     P +S +G+    +                              
Sbjct: 114 HGGEARQLTQMRHGAGDPVWSPDGRYIAFTSAVGPEDRRELLTRAKTDADKKAEEKKAKD 173

Query: 278 --KDEAMDIYSVDLQSNATER---------------------LTNTLFINISASYSPDSS 314
             +   +  +  D      ER                     +T   + +  A++SPD  
Sbjct: 174 EARTFTIMRWRSDAAGIRPERWQQIWVVPVPRHGEPMPKPVQVTWGNYDHGGATWSPDGR 233

Query: 315 QIVFESDREGKE-----QLYVMQSNGSDQ------------------------------- 338
            I F ++R   E      +++    G D                                
Sbjct: 234 YIAFGANRTEDESLRLRDIFITPVPGEDSPAARASVAPPEPGAAEPGEEEAKALAEQLRK 293

Query: 339 ----------KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQE 383
                      R       ++    +SP G  +A      E        I +   +G + 
Sbjct: 294 AAEEAEAAFRPRNVTGGIGAFRAARFSPDGKTLAAIGHQNEYQNATLPRIYLYPVEGGEP 353

Query: 384 RLLVED--------SNLQAP-------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           R+L                P       TWSP G  +       G     +Y+  ++G   
Sbjct: 354 RILDHRDLEIGNSVGADVRPAGPGVEVTWSPDGGRICVPVVHRG--ACAVYTFPVSGDPP 411

Query: 429 TLI 431
            L+
Sbjct: 412 QLL 414



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 10/108 (9%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVMKKDGSQERLLVEDS-NLQAPTW 397
           +  +  DP  SP G+++AF +          +  I +    G +     +   N  +P W
Sbjct: 30  RFVTVSDPQISPDGEVVAFVRTHIDPESKEPRSRIWMAPAAGGEPVPFTQGPKNDTSPRW 89

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
           SP GR+L F   + GD   +++ ID +G     +    + A DP W  
Sbjct: 90  SPDGRTLAFVSDRGGDR--QIWLIDRHGGEARQLTQMRHGAGDPVWSP 135



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 52/382 (13%), Positives = 101/382 (26%), Gaps = 122/382 (31%)

Query: 167 TGEKGDFNSR-ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           T  +   + R + FVS+          + ++DR G   R LT  R     +P +SP+ + 
Sbjct: 85  TSPRWSPDGRTLAFVSDRGGD----RQIWLIDRHGGEARQLTQMRHG-AGDPVWSPDGRY 139

Query: 226 VAYAT---------------------------------------------YDDEDILRVY 240
           +A+ +                                                E   +++
Sbjct: 140 IAFTSAVGPEDRRELLTRAKTDADKKAEEKKAKDEARTFTIMRWRSDAAGIRPERWQQIW 199

Query: 241 LM----DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-----MDIYSVDLQS 291
           ++           P ++           +S +G+       + E       DI+   +  
Sbjct: 200 VVPVPRHGEPMPKPVQVTWGNYDHGGATWSPDGRYIAFGANRTEDESLRLRDIFITPVPG 259

Query: 292 N------------------------------------------ATERLTNTLFINISASY 309
                                                          +T  +    +A +
Sbjct: 260 EDSPAARASVAPPEPGAAEPGEEEAKALAEQLRKAAEEAEAAFRPRNVTGGIGAFRAARF 319

Query: 310 SPDSSQIVFESDREGK-----EQLYVMQSNGSDQKRISQ------DKEASYFDPV----- 353
           SPD   +     +         ++Y+    G + + +        +   +   P      
Sbjct: 320 SPDGKTLAAIGHQNEYQNATLPRIYLYPVEGGEPRILDHRDLEIGNSVGADVRPAGPGVE 379

Query: 354 --WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKK 410
             WSP G  I          A+      G   +LLV     +   T+  SGR L F+   
Sbjct: 380 VTWSPDGGRICVPVVHRGACAVYTFPVSGDPPQLLVGGEREIYGGTFDRSGRRLAFAAGS 439

Query: 411 DGDTGSKLYSIDLNGRNETLIN 432
             + G  +Y  DL    E  + 
Sbjct: 440 ISEIG-DIYVHDLTTGEERRLT 460



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 53/160 (33%), Gaps = 21/160 (13%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEA-----MDIYSVDLQSNATERL------ 297
            P+ +        A RFS +GK       ++E        IY   ++      L      
Sbjct: 303 RPRNVTGGIGAFRAARFSPDGKTLAAIGHQNEYQNATLPRIYLYPVEGGEPRILDHRDLE 362

Query: 298 -TNTLFINISA-------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
             N++  ++         ++SPD  +I       G   +Y    +G D  ++    E   
Sbjct: 363 IGNSVGADVRPAGPGVEVTWSPDGGRICVPVVHRGACAVYTFPVSG-DPPQLLVGGEREI 421

Query: 350 FDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVE 388
           +   +   G  +AF   S  E   I V      +ER L  
Sbjct: 422 YGGTFDRSGRRLAFAAGSISEIGDIYVHDLTTGEERRLTA 461



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 65/181 (35%), Gaps = 19/181 (10%)

Query: 218 RFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKR------IGNFRSMILAPR--- 264
           RFSP+ + +A   + +E     + R+YL                 IGN     + P    
Sbjct: 318 RFSPDGKTLAAIGHQNEYQNATLPRIYLYPVEGGEPRILDHRDLEIGNSVGADVRPAGPG 377

Query: 265 ----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S +G R  + V    A  +Y+  +  +  + L          ++     ++ F +
Sbjct: 378 VEVTWSPDGGRICVPVVHRGACAVYTFPVSGDPPQLLVGGEREIYGGTFDRSGRRLAFAA 437

Query: 321 DR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                   +YV      +++R++    A + +  W P+ + + F    G      VMK  
Sbjct: 438 GSISEIGDIYVHDLTTGEERRLTAVNAALFAEIEW-PEVEELNFKARDGWDLHGWVMKPV 496

Query: 380 G 380
           G
Sbjct: 497 G 497



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 9/77 (11%)

Query: 377 KKDGSQERLLVED----SNLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSID-LNGRN 427
               S+ RL+ ED      +  P  SP G  + F R        +  S+++      G  
Sbjct: 15  PLSASKRRLIPEDLYRFVTVSDPQISPDGEVVAFVRTHIDPESKEPRSRIWMAPAAGGEP 74

Query: 428 ETLINTPAYASDPQWVG 444
                 P   + P+W  
Sbjct: 75  VPFTQGPKNDTSPRWSP 91


>gi|148263039|ref|YP_001229745.1| peptidase S9B dipeptidylpeptidase IV subunit [Geobacter
           uraniireducens Rf4]
 gi|146396539|gb|ABQ25172.1| WD-40 repeat-containing protein [Geobacter uraniireducens Rf4]
          Length = 976

 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 102/255 (40%), Gaps = 24/255 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM--- 242
               ++ +  +++       +  +  + L  PRFSP+  ++A+   D     +  +    
Sbjct: 291 KKEEQSRIATLEKAPFTPLKVLSTVGENLTNPRFSPDGGRLAFNVNDPHGHSKTVITSRD 350

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERL 297
              I    +R  + + +     +S +G R   +  +     D   D+Y+ DL+ +  +RL
Sbjct: 351 GATIQAEFRRQFSDQGL----SWSPDGNRLYFAQAEVVRGFDIYQDLYAYDLRRDRVQRL 406

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS----NGSD---QKRISQDKEASYF 350
           T+ L I      SPD        +  G + L ++ +    +G +    + ++  ++    
Sbjct: 407 TSGLRIKD-PEISPDGKYFALAVNDRGSQNLALLDARETLDGRNNLKPRLVTAYRQERVA 465

Query: 351 DPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSR 408
            P W+P    IA+       K ++ +      Q+R LL    N   P+WS  GR + +  
Sbjct: 466 TPRWAPDSRTIAYAVTDNRGKTSLRLYDVKSGQDRPLLTVSYNAAYPSWSRDGRIIYYVS 525

Query: 409 KKDGDTGSKLYSIDL 423
            + G     L++ DL
Sbjct: 526 DETG--VYNLFAYDL 538



 Score = 93.5 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 80/229 (34%), Gaps = 11/229 (4%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+ F    VV G       +   D    R    +    + +P  SP+ +  A A  D   
Sbjct: 375 RLYFAQAEVVRGFDIYQ-DLYAYDLRRDRVQRLTSGLRIKDPEISPDGKYFALAVNDRGS 433

Query: 236 ILRVYL-----MDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKD-EAMDIYSVD 288
                L     +D R +  P+ +  +R   +  PR++ + +    +V  +     +   D
Sbjct: 434 QNLALLDARETLDGRNNLKPRLVTAYRQERVATPRWAPDSRTIAYAVTDNRGKTSLRLYD 493

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           ++S     L    +     S+S D   I + SD  G   L+          ++S     +
Sbjct: 494 VKSGQDRPLLTVSYNAAYPSWSRDGRIIYYVSDETGVYNLFAYDLKEEKSYQVSHLLGGA 553

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              P  +P  D + F+ ++   F I  +  D +   L  +      P W
Sbjct: 554 -MQPDAAPDDDTLVFSSYTARGFNIASLTLDRNSWTL--QRGPSITPYW 599



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 54/154 (35%), Gaps = 20/154 (12%)

Query: 305 ISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +  +SPD  ++ F  +D  G  +  +   +G+   +    ++ S     WSP G+ + F
Sbjct: 320 TNPRFSPDGGRLAFNVNDPHGHSKTVITSRDGATI-QAEFRRQFSDQGLSWSPDGNRLYF 378

Query: 364 -----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                 +       +        + + L     ++ P  SP G+    +    G     L
Sbjct: 379 AQAEVVRGFDIYQDLYAYDLRRDRVQRLTSGLRIKDPEISPDGKYFALAVNDRGSQNLAL 438

Query: 419 YSI--DLNGRN-----------ETLINTPAYASD 439
                 L+GRN           +  + TP +A D
Sbjct: 439 LDARETLDGRNNLKPRLVTAYRQERVATPRWAPD 472


>gi|255548307|ref|XP_002515210.1| conserved hypothetical protein [Ricinus communis]
 gi|223545690|gb|EEF47194.1| conserved hypothetical protein [Ricinus communis]
          Length = 618

 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 66/315 (20%), Positives = 104/315 (33%), Gaps = 65/315 (20%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +    G F S          +  +   L ++  +G+  R+   SRD+  F   +SP ++
Sbjct: 280 RLLRLNGSFASYSPDSDYIAFNAGLSQGLHIVRSNGS-KRWTLFSRDRTAFYTSWSPTEK 338

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            V Y T        V+    R  +  +             F  +          D   D 
Sbjct: 339 NVIYTTLGP-----VFAHVNRTVQIARV-----------TFDPS----------DLKPDR 372

Query: 285 YSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK---R 340
             +       + LT      N   + SPD   +VF S R G + LY+M +   + K   R
Sbjct: 373 NEIPCD---VKMLTGEDSGNNAFPACSPDGKYLVFRSGRSGHKNLYIMDAVEGEFKGDIR 429

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSG-----EKFAIGVMKKDGSQERLLVEDS----- 390
              +       P WSP+GDLIAF+           F+I V+K DGS  R +  +      
Sbjct: 430 PLTEGACIDTMPCWSPKGDLIAFSSNRHKPEHANPFSIYVIKPDGSGLRRIHLEGSERLS 489

Query: 391 --------NLQAPTWSPSGRSLIFSRKKDG------------DTGSKLYSIDLNGRNETL 430
                    +   T+S  G  L+F+    G                 +Y   L+G     
Sbjct: 490 EEEREWMERINHVTFSSDGEWLLFTANLGGLSAEPVAVPRQIQPYGDIYVARLDGSGLRR 549

Query: 431 INTPAY-ASDPQWVG 444
           +    Y    P W  
Sbjct: 550 LTWNGYENGTPVWYP 564



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 54/311 (17%), Positives = 97/311 (31%), Gaps = 88/311 (28%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-----PKRIGNFRSMILAPRFSSNGK 270
            P +S +   + +    D+    ++ ++   D +     P R+       L P    +GK
Sbjct: 141 WPTWSGD-STIYFHRKADDGFWSIFQVNFSDDLSELPCAPVRVTPPGVHCLTPAAMHDGK 199

Query: 271 RALISVQKDE--AMDIYSVDLQSNA---TERLTNTLFINISA------------------ 307
           R +++ ++       I   D+ S       +L N  F + +                   
Sbjct: 200 RIVVATRRRGKVHRHIEIFDIVSKTFYPVTQLINPSFQHYNPFVSQDSLFIGYHRFRGES 259

Query: 308 ------------------------------SYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                                         SYSPDS  I F +     + L++++SNGS 
Sbjct: 260 APGETTIPNLEPVKSPIEGIRLLRLNGSFASYSPDSDYIAFNA--GLSQGLHIVRSNGS- 316

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVMKKDGS---------- 381
           ++     ++ + F   WSP    + +T              I  +  D S          
Sbjct: 317 KRWTLFSRDRTAFYTSWSPTEKNVIYTTLGPVFAHVNRTVQIARVTFDPSDLKPDRNEIP 376

Query: 382 -QERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-----NGRNETLINT 433
              ++L   +  N   P  SP G+ L+F   + G     LY +D       G    L   
Sbjct: 377 CDVKMLTGEDSGNNAFPACSPDGKYLVFRSGRSGHK--NLYIMDAVEGEFKGDIRPLTEG 434

Query: 434 PAYASDPQWVG 444
               + P W  
Sbjct: 435 ACIDTMPCWSP 445



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 56/159 (35%), Gaps = 23/159 (14%)

Query: 284 IYSVDL--QSNATERLTNTLFINISASYSPDSSQIVFESDREG---------KEQLYVMQ 332
           +Y++DL  + N+  RLT    I+ S + S     I   S                + V +
Sbjct: 66  LYAIDLNQEGNSVTRLTPYGVIDYSPAVSLSGKYIAVGSYGSRIWDVEFQMLTTDIVVFK 125

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDG-------SQER 384
            +  + + +  ++      P WS     I F + + + F +I  +           +  R
Sbjct: 126 QSDPENRVVVCERGG---WPTWSGDST-IYFHRKADDGFWSIFQVNFSDDLSELPCAPVR 181

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +     +   P     G+ ++ + ++ G     +   D+
Sbjct: 182 VTPPGVHCLTPAAMHDGKRIVVATRRRGKVHRHIEIFDI 220


>gi|116620945|ref|YP_823101.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224107|gb|ABJ82816.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 667

 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 53/348 (15%), Positives = 113/348 (32%), Gaps = 45/348 (12%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG----- 187
           V + K +        PA   +   T + D  Q I+  +   +S  +       +      
Sbjct: 43  VSNAKGLRNIMVAEPPAYVGRKITTYAADDGQEISDLRWTPDSSAIVYVRGGSANPALDP 102

Query: 188 -IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
             +  ++     DG   R +          P  SP   KV +         +++      
Sbjct: 103 AGVTQAIWRAALDGTAARKIGEGN-----APAVSPKGDKVVFI-----RAGQLWWAPLDG 152

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                ++   R     PR+S +G R   +  + +   I   D+ + A   L  +   +  
Sbjct: 153 KAEASQVFQARGACDRPRWSPDGARISFTSARGDHGFIGVFDVAAGALRYLDPSTDNDSE 212

Query: 307 ASYSPDSSQIVFES------------DREGKE-QLYVMQSNGSDQKRISQDKEA------ 347
             +SPD   + F               R G+   + +  ++    + +   +E       
Sbjct: 213 PEWSPDGRSVAFLRVPSSGVRMPREPHRTGEPWSIRIADAHTGAGREVFHAREGAGSVFR 272

Query: 348 --SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +  + +    G+ + F         +  +  +G +  LL      +    + SG+ ++
Sbjct: 273 GVNARNQILWADGNRLVFPWEPEGWTHLYAVSTEGGKATLLT-PGKFEVEDVAVSGKQVL 331

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGFM 446
           +S  +D      L+ +  +G   T I +       PA  SDP  + F+
Sbjct: 332 YSSNQDDIDRRHLWKVAADGGVPTAITSGQGIECQPAPTSDPNVITFL 379



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 65/194 (33%), Gaps = 25/194 (12%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESD 321
           +  G +           +I   +  +    ++T     +        ++PDSS IV+   
Sbjct: 34  APAGGKVAWVSNAKGLRNIMVAEPPAYVGRKITTYAADDGQEISDLRWTPDSSAIVYVRG 93

Query: 322 REGKE---------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                          ++    +G+  ++I    E +   P  SP+GD + F +       
Sbjct: 94  GSANPALDPAGVTQAIWRAALDGTAARKI---GEGN--APAVSPKGDKVVFIRAG----Q 144

Query: 373 IGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +     DG  E  ++         P WSP G  + F+  +       ++ +   G    L
Sbjct: 145 LWWAPLDGKAEASQVFQARGACDRPRWSPDGARISFTSARGDHGFIGVFDV-AAGALRYL 203

Query: 431 INTPAYASDPQWVG 444
             +    S+P+W  
Sbjct: 204 DPSTDNDSEPEWSP 217


>gi|254224604|ref|ZP_04918220.1| tricorn protease [Vibrio cholerae V51]
 gi|125622667|gb|EAZ50985.1| tricorn protease [Vibrio cholerae V51]
          Length = 1084

 Score =  110 bits (274), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 43/254 (16%)

Query: 211 DQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           D     P +      SP+ QK+A+             +          +         P 
Sbjct: 32  DSTQARPTWLRDIALSPDGQKIAFTYAGQ------IWLVPAQGGDAVALTESGVYSETPI 85

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S + +    +  +    D++ + +Q   + RLT     +I  ++S D  Q+ F S R G
Sbjct: 86  WSPDSQSIAFTADRYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLG 145

Query: 325 KE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            +             QLY + + G  ++R+      +  D   SP    I +T       
Sbjct: 146 DDKANANVKQGSFMAQLYSVPAAGGREQRVL---PIAISDLAISPSHSDILYTNQPSDEQ 202

Query: 367 -------SGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  S     I       G   ++       + P WS  G S+ +  ++ G     +
Sbjct: 203 PWRKGAVSDATRDIWQWSPRTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSF--NI 260

Query: 419 YSIDLNGRNETLIN 432
           +    +G     I 
Sbjct: 261 WQQRFDGSEPVQIT 274



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 71/205 (34%), Gaps = 30/205 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G++   +     A  I+ V  Q      LT +   + +  +SPDS  I F +DR 
Sbjct: 45  ALSPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRY 100

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------ 371
           G   ++++   G + +R++    A      +S  G  + F+                   
Sbjct: 101 GLGDVFILSIQGGESRRLTYHG-AKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFM 159

Query: 372 -AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYS 420
             +  +   G +E+ ++    +     SPS   ++++ +             D    ++ 
Sbjct: 160 AQLYSVPAAGGREQRVL-PIAISDLAISPSHSDILYTNQPSDEQPWRKGAVSDATRDIWQ 218

Query: 421 ID-LNGRNETLINTPAYASDPQWVG 444
                G++  +        +P W  
Sbjct: 219 WSPRTGKHTQITTFRGEDRNPVWSA 243



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 99/331 (29%), Gaps = 89/331 (26%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRID 247
           G + R        I +   FS + Q++ +++    D            + ++Y +     
Sbjct: 113 GESRRLTYHGAKDIPY--AFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAGG 170

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIYSVDLQSNATE 295
           R  + +      I     S +    L + Q             D   DI+    ++    
Sbjct: 171 REQRVL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGAVSDATRDIWQWSPRTGKHT 227

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------------ 343
           ++T     + +  +S D S + + S++ G   ++  + +GS+  +I+             
Sbjct: 228 QITTFRGEDRNPVWSADGSSMYYLSEQAGSFNIWQQRFDGSEPVQITDHQKLPVRFLSAS 287

Query: 344 ---DKEASYFDPVW--------------------SPQGDLIAFTKFSGEKF--------- 371
              D    +   +W                     P G           +          
Sbjct: 288 LQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEATEMVVAPNAAEV 347

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT---------G 415
                  + V+       + + +    +   ++S  G  LI++ +++G           G
Sbjct: 348 AIVARGDVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSYVNDG 407

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            K +S  L+   E ++ T      P +   +
Sbjct: 408 GKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 80/211 (37%), Gaps = 28/211 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 341 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDVSFSSDGYRLIYASERE 394

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   +                  LT    + I   YSP+  +IV+   RE +  L
Sbjct: 395 GSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDV-IQPLYSPNLKRIVY---RENRNTL 450

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + I     +     I ++K DGS+ 
Sbjct: 451 KVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEV 510

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            + L +    + AP +S  G+ + +     G
Sbjct: 511 PINLSQSGFSEFAPQFSADGQWVYWLTDAKG 541



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 99/288 (34%), Gaps = 45/288 (15%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------KVAYATYDDEDILRVYLMDTR 245
           +     DG+    +T  +   +     S           ++       +   +V +   R
Sbjct: 260 IWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRR 319

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +   NF         + N     I  + D    +Y V L S  T+R+T+T    
Sbjct: 320 SAMPDGRHNVNFNLEATEMVVAPNAAEVAIVARGD----VYVVSLLSGLTQRITDTPEAE 375

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPV 353
              S+S D  ++++ S+REG   LY    N             ++  ++ +++     P+
Sbjct: 376 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQD--VIQPL 433

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIF 406
           +SP    I + +       + V   +  +   L++   L +         WSP    ++ 
Sbjct: 434 YSPNLKRIVYRENRNT---LKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV- 489

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT--------PAYASDPQWVGFM 446
             +    +   +  +  +G    +  +        P +++D QWV ++
Sbjct: 490 -TRDRAMSNGDIQLLKFDGSEVPINLSQSGFSEFAPQFSADGQWVYWL 536



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 69/171 (40%), Gaps = 19/171 (11%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+  +   ++ + Y+ D        +D   + +      ++ P +S N 
Sbjct: 379 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR +    ++    +   D++ + T  L +   +      ++S  +SPDS  IV   DR 
Sbjct: 439 KRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV-TRDRA 494

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                + +++ +GS+          S F P +S  G  + +   +     I
Sbjct: 495 MSNGDIQLLKFDGSEVPINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDI 545


>gi|156742759|ref|YP_001432888.1| peptidase S41 [Roseiflexus castenholzii DSM 13941]
 gi|156234087|gb|ABU58870.1| peptidase S41 [Roseiflexus castenholzii DSM 13941]
          Length = 1117

 Score =  109 bits (273), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 15/177 (8%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D+++V        RLT       S + SPD + + F    EG  +++VM + G + +R
Sbjct: 22  EDDLWTVPASGGVARRLTANPGSVQSPALSPDGALLAFVGRDEGPGEVFVMPAEGGEARR 81

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDGSQERLLVEDSNLQAPT 396
           ++    A+     W   G  I F   +   F+    +  ++ DG + RLL     +   +
Sbjct: 82  LTFLG-ATMRVCGWGRNGREILFASSASLPFSRMALLYAIRADGGEPRLLPTGPAVTI-S 139

Query: 397 WSPSGRSLI---------FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           + P+G ++I         + R + G TG      D  G    LI  P   + P WVG
Sbjct: 140 YGPTGGAVIGRNESDPARWKRYRGGRTGDVWIDPDGTGEWRRLIALPGNIAIPLWVG 196



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 65/190 (34%), Gaps = 22/190 (11%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +R+      + +P  S +G       + +   +++ +  +     RLT       
Sbjct: 31  SGGVARRLTANPGSVQSPALSPDGALLAFVGRDEGPGEVFVMPAEGGEARRLTFLGATMR 90

Query: 306 SASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              +  +  +I+F S           LY ++++G + + +            + P G  +
Sbjct: 91  VCGWGRNGREILFASSASLPFSRMALLYAIRADGGEPRLL---PTGPAVTISYGPTGGAV 147

Query: 362 A---------FTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKK 410
                     + ++ G +     +  DG+ E  RL+    N+  P W   G  + F    
Sbjct: 148 IGRNESDPARWKRYRGGRTGDVWIDPDGTGEWRRLIALPGNIAIPLWV--GERIYFVSDH 205

Query: 411 DGDTGSKLYS 420
           +G     LYS
Sbjct: 206 EG--VGNLYS 213



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 80/255 (31%), Gaps = 30/255 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   R LT      +  P  SP+   +A+   D E    V++M        +
Sbjct: 24  DLWTVPASGGVARRLTA-NPGSVQSPALSPDGALLAFVGRD-EGPGEVFVMPAE-GGEAR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMD----IYSVDLQSNATERLTNTLFINISA 307
           R+    + +    +  NG+  L +            +Y++         L     + IS 
Sbjct: 81  RLTFLGATMRVCGWGRNGREILFASSASLPFSRMALLYAIRADGGEPRLLPTGPAVTIS- 139

Query: 308 SYSPDSSQIV---------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            Y P    ++         ++  R G+     +  +G+ + R       +   P+W   G
Sbjct: 140 -YGPTGGAVIGRNESDPARWKRYRGGRTGDVWIDPDGTGEWRRLIALPGNIAIPLWV--G 196

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           + I F         +      G   +      +   + P  S  GR +++        G+
Sbjct: 197 ERIYFVSDHEGVGNLYSCLPTGDDLQRHTWHREYYARFP--STDGRRIVY------HAGA 248

Query: 417 KLYSIDLNGRNETLI 431
            LY  D        I
Sbjct: 249 DLYLFDPATNTSRRI 263



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 71/204 (34%), Gaps = 31/204 (15%)

Query: 265 FSSNGKRALISVQKDE--AMDIYSVDLQSNATE--------------------RLTN-TL 301
           +  +G+R ++         ++I+SV   +                        RL    +
Sbjct: 331 WLPDGRRIVVVSDAVGEETLEIHSVAFSNGGQRAAASDAAAVDAALSPFDAPVRLEGLDI 390

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              ++ + SP +  +   ++R    +L ++       + + + + AS     WSP G  +
Sbjct: 391 GRPMALAVSPKAPLVAVANNR---NELLLVDLTERTVRLLDRSRYASMLGIAWSPDGRWL 447

Query: 362 AFTKF-SGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           A+  + +G+   I V +        +       ++P + P G+ L F   +D D      
Sbjct: 448 AYGFWETGQTSIIKVCEVATGTITPVTRPVLVDRSPAFDPEGKYLYFISSRDFDPVYDDM 507

Query: 420 SIDLN---GRNETLINTPAYASDP 440
             DL    G    L+   A    P
Sbjct: 508 HFDLGFPRGTRPFLVTLRANLRSP 531



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 5/107 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP    VA A   +E +L      T       R  +   +     +S +G+       
Sbjct: 397 AVSPKAPLVAVANNRNELLLVDLTERTVRLLDRSRYASMLGI----AWSPDGRWLAYGFW 452

Query: 278 KDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           +     I  V ++ +     +T  + ++ S ++ P+   + F S R+
Sbjct: 453 ETGQTSIIKVCEVATGTITPVTRPVLVDRSPAFDPEGKYLYFISSRD 499



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 34/95 (35%), Gaps = 1/95 (1%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +N L ++D     +R L  SR   +    +SP+ + +AY  ++      + + +    
Sbjct: 409 NNRNELLLVDLTERTVRLLDRSRYASMLGIAWSPDGRWLAYGFWETGQTSIIKVCEVATG 468

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                +     +  +P F   GK       +D   
Sbjct: 469 TIT-PVTRPVLVDRSPAFDPEGKYLYFISSRDFDP 502


>gi|322371404|ref|ZP_08045953.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
 gi|320548936|gb|EFW90601.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
          Length = 676

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 97/242 (40%), Gaps = 25/242 (10%)

Query: 214 LFEPRFSPNQQKVAYATYDDED----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           + +P+ SP+ ++VA+     +D       VY++       PK+      +  +PR+S +G
Sbjct: 15  VTDPQVSPDGERVAFVRSVPKDDEKYEATVYVVPLG-GDEPKQFTISEGVDSSPRWSPSG 73

Query: 270 KRALISVQK---DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREG 324
            R      +   D+   ++ +        ++T+        ++SPD ++I F   S  + 
Sbjct: 74  DRLAFVSTRGADDDRPQLWVMPTAGGEARQVTDVAGGVSQLAWSPDGTKIAFVQSSTEDD 133

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +++   +  +G + +  + D          +  G     + F G++  + +   D     
Sbjct: 134 RDEERDVSLDGEEYEPETPDPRVIDRKIYRA--GT----SYFDGKRSHVYLADLDDDSVE 187

Query: 385 LLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL------YSIDLNGRNETLINTPAYA 437
            L + D +  AP W     +L F  +++ D    +      Y ID +   ETL  T A+ 
Sbjct: 188 RLTDGDFDFAAPDWG-DETTLYFGAEREDDPDDNIIVDVVAYDIDAD-EEETLFQTSAWG 245

Query: 438 SD 439
           + 
Sbjct: 246 AS 247



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 97/321 (30%), Gaps = 62/321 (19%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+ FV           +   +   G +        + +   PR+SP+  ++A+ +    D
Sbjct: 26  RVAFVRSVPKDDEKYEATVYVVPLGGDEPKQFTISEGVDSSPRWSPSGDRLAFVSTRGAD 85

Query: 236 ILRVYLMDTRI-DRAPKRIGNFRSMILAPRFSSNGKRALI-------------------- 274
             R  L          +++ +    +    +S +G +                       
Sbjct: 86  DDRPQLWVMPTAGGEARQVTDVAGGVSQLAWSPDGTKIAFVQSSTEDDRDEERDVSLDGE 145

Query: 275 ---------------------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                                S    +   +Y  DL  ++ ERLT+  F   +  +  D 
Sbjct: 146 EYEPETPDPRVIDRKIYRAGTSYFDGKRSHVYLADLDDDSVERLTDGDFDFAAPDWG-DE 204

Query: 314 SQIVFESDREGKEQLYVM------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + + F ++RE      ++        +  +++ + Q           +  G  IA+    
Sbjct: 205 TTLYFGAEREDDPDDNIIVDVVAYDIDADEEETLFQTSAWGASLAA-TEDGR-IAYIYSP 262

Query: 368 GEKFAIG-----VMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            E   +      V  +   +   L E  +     AP W P    + F    +GD    ++
Sbjct: 263 EENATLRQADLKVFDRGTGETVTLTETLDRTVAIAPEWDPEEERVYFGTPDEGDQ--VIW 320

Query: 420 SIDLNGRNE-TLINTPAYASD 439
               +G  E   +    + +D
Sbjct: 321 RARGDGSEELQRVVGDGHITD 341



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 8/105 (7%)

Query: 348 SYFDPVWSPQGDLIAFTKF---SGEKFA--IGVMKKDGSQERLLV-EDSNLQAPTWSPSG 401
           S  DP  SP G+ +AF +      EK+   + V+   G + +     +    +P WSPSG
Sbjct: 14  SVTDPQVSPDGERVAFVRSVPKDDEKYEATVYVVPLGGDEPKQFTISEGVDSSPRWSPSG 73

Query: 402 RSLIFSRKKDGDTG-SKLYSIDLNGRNETLINT-PAYASDPQWVG 444
             L F   +  D    +L+ +   G     +       S   W  
Sbjct: 74  DRLAFVSTRGADDDRPQLWVMPTAGGEARQVTDVAGGVSQLAWSP 118



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 85/228 (37%), Gaps = 24/228 (10%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R ++ + +      ++ + + D D  ++  LT   D     P +  ++  + +    ++
Sbjct: 158 DRKIYRAGTSYFDGKRSHVYLADLDDDSVERLTDG-DFDFAAPDW-GDETTLYFGAERED 215

Query: 235 DI-----LRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           D      + V   D   D        +     LA     +G R       +E   +   D
Sbjct: 216 DPDDNIIVDVVAYDIDADEEETLFQTSAWGASLAATE--DG-RIAYIYSPEENATLRQAD 272

Query: 289 LQ-----SNATERLTNTLFINIS--ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KR 340
           L+     +  T  LT TL   ++    + P+  ++ F +  EG + ++  + +GS++ +R
Sbjct: 273 LKVFDRGTGETVTLTETLDRTVAIAPEWDPEEERVYFGTPDEGDQVIWRARGDGSEELQR 332

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLV 387
           +  D   + F    S   D +A+ K        + V    G++   L 
Sbjct: 333 VVGDGHITDF----SVGADAVAYVKSEWDHPGDLFVSTPGGAETHRLT 376


>gi|134080129|emb|CAK46110.1| unnamed protein product [Aspergillus niger]
          Length = 719

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 57/340 (16%), Positives = 99/340 (29%), Gaps = 86/340 (25%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAY 228
             +    I +  +    G     L + + DG N  + L    +   + P +S + + + +
Sbjct: 83  PIEGKKGIFYRLQVNRIGPSGGQLWISNSDGTNATQLLGNQSNAFDYHPTWSSDGEWIVF 142

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSV 287
            +                    + +    S+      S NGK     S Q +   +I+  
Sbjct: 143 TSERRGPGQSDLYRVRVDGSGLETLAATDSVEDIGVLSPNGKTLAYVSTQGNYTTNIWVK 202

Query: 288 DLQSNATERLTNTLFINIS---------ASYSPDSSQIVFESDR--------EGKE---- 326
           DL S   + LT+T                S+SPD   IVF SDR        +G      
Sbjct: 203 DLASGQAQNLTDTASNRADNTWPTGHFRPSWSPDGEWIVFSSDRNTDWTGHSDGTGWEHT 262

Query: 327 ---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------------- 370
               +Y ++ +GSD + + + +  S   P +SP G  I +   + E              
Sbjct: 263 QTLGVYAVRPDGSDFRTVIRQEGYSLGTPQFSPDGKRIIYNNMTTEDTYGCHGVSAQQEA 322

Query: 371 --FAIGVMKKDGSQERLLVEDS-------------------------------------- 390
               I  +        +                                           
Sbjct: 323 VTAQIYSVDFATGSNVIAHTSGSYPKVGQHYIGNSTNIGYLIKAGDYEGIHYTKPDFTHR 382

Query: 391 -----NLQAPTWSPSGRSLIFS--RKKDGDTGSKLYSIDL 423
                N++ P WSP G  L++            KL+S D 
Sbjct: 383 SFNLTNMRDPWWSPDGSKLVYWVPNWTQQAAELKLWSYDT 422



 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 81/231 (35%), Gaps = 43/231 (18%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL------ISVQKDEAMDIYSVDLQSNAT 294
           + +       + +    S    P ++ +G   +         +      IY         
Sbjct: 475 IYNISNSTEVEWLEEGNSGAFQPSWNPDGTELVSGFGAWFVSRTTNTAKIYHAFANGTWH 534

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEASYFD 351
             LT+    +   S+SPD S IV+       E    L+++        +++   +     
Sbjct: 535 TNLTDGSDNSGFPSWSPDGSAIVYRKWSLATEAPLGLHILNFTTGKTHQLT---DGWDNT 591

Query: 352 PVWSPQGDLIAFTKFSG-----------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSP- 399
           P WSP G+ I FT+ +            ++F I  ++ DGS+   + +  +  A    P 
Sbjct: 592 PGWSPDGERIVFTRNNNWTESYGARWYADRFDIYTIRPDGSELTRVTDSLSNDAQYVYPS 651

Query: 400 ------SGRSLIFSRKKDG------------DTGSKLYSIDLNGRNETLIN 432
                  GR +++S  + G                ++  ++ +G N+TL+ 
Sbjct: 652 LFLDFTDGR-IMWSSGQYGFKDESALFDDTFQPYGQIMVMNYDGTNKTLVT 701



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 79/209 (37%), Gaps = 35/209 (16%)

Query: 270 KRALISVQKDE----AMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDRE 323
           K     +Q +        ++  +       +L    +   +   ++S D   IVF S+R 
Sbjct: 88  KGIFYRLQVNRIGPSGGQLWISNSDGTNATQLLGNQSNAFDYHPTWSSDGEWIVFTSERR 147

Query: 324 GKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDG 380
           G  Q  LY ++ +GS  + ++          V SP G  +A+    G     I V     
Sbjct: 148 GPGQSDLYRVRVDGSGLETLAATDSVEDIG-VLSPNGKTLAYVSTQGNYTTNIWVKDLAS 206

Query: 381 SQERLLVEDSNLQA----------PTWSPSGRSLIFSRKKDGDTGSK------------- 417
            Q + L + ++ +A          P+WSP G  ++FS  ++ D                 
Sbjct: 207 GQAQNLTDTASNRADNTWPTGHFRPSWSPDGEWIVFSSDRNTDWTGHSDGTGWEHTQTLG 266

Query: 418 LYSIDLNGRN-ETLINTPAYA-SDPQWVG 444
           +Y++  +G +  T+I    Y+   PQ+  
Sbjct: 267 VYAVRPDGSDFRTVIRQEGYSLGTPQFSP 295



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 67/141 (47%), Gaps = 21/141 (14%)

Query: 325 KEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGS 381
             QL++  S+G++  ++  ++  A  + P WS  G+ I FT  +    +  +  ++ DGS
Sbjct: 103 GGQLWISNSDGTNATQLLGNQSNAFDYHPTWSSDGEWIVFTSERRGPGQSDLYRVRVDGS 162

Query: 382 QERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT------ 433
               L    +++     SP+G++L +   + G+  + ++  DL +G+ + L +T      
Sbjct: 163 GLETLAATDSVEDIGVLSPNGKTLAYVSTQ-GNYTTNIWVKDLASGQAQNLTDTASNRAD 221

Query: 434 ---------PAYASDPQWVGF 445
                    P+++ D +W+ F
Sbjct: 222 NTWPTGHFRPSWSPDGEWIVF 242



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 58/361 (16%), Positives = 108/361 (29%), Gaps = 105/361 (29%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQIL--------FEPRFSPNQQKVAYAT-------- 230
           G    ++ V D      + LT +             F P +SP+ + + +++        
Sbjct: 193 GNYTTNIWVKDLASGQAQNLTDTASNRADNTWPTGHFRPSWSPDGEWIVFSSDRNTDWTG 252

Query: 231 ------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---------- 274
                 ++    L VY +          I      +  P+FS +GKR +           
Sbjct: 253 HSDGTGWEHTQTLGVYAVRPDGSDFRTVIRQEGYSLGTPQFSPDGKRIIYNNMTTEDTYG 312

Query: 275 -----SVQKDEAMDIYSVDLQSN--------------ATERLTNTLFINI---------- 305
                + Q+     IYSVD  +                   + N+  I            
Sbjct: 313 CHGVSAQQEAVTAQIYSVDFATGSNVIAHTSGSYPKVGQHYIGNSTNIGYLIKAGDYEGI 372

Query: 306 ------------------SASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQ-- 343
                                +SPD S++V+   +  +   +L +   +   + R     
Sbjct: 373 HYTKPDFTHRSFNLTNMRDPWWSPDGSKLVYWVPNWTQQAAELKLWSYDTEWEYRYMDVF 432

Query: 344 -------DKEASYFDPVWSPQGDLI----AFTKFSG--EKFAIGVMKKDGSQERLLVEDS 390
                  ++ AS    + S  G L+     +T      + + I  +      E L   +S
Sbjct: 433 PMHNTVINRIASTQKVLGSANGSLVHSSPVYTDVVDALDSYDIYNISNSTEVEWLEEGNS 492

Query: 391 NLQAPTWSPSGRSLI------FSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWV 443
               P+W+P G  L+      F  +      +K+Y    NG   T L +    +  P W 
Sbjct: 493 GAFQPSWNPDGTELVSGFGAWFVSRT--TNTAKIYHAFANGTWHTNLTDGSDNSGFPSWS 550

Query: 444 G 444
            
Sbjct: 551 P 551



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 85/267 (31%), Gaps = 67/267 (25%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            G  F S   +  KI H  ++  + +   +  D +    +  +       K SL      
Sbjct: 510 FGAWFVSRTTNTAKIYHAFANGTWHTNLTDGSDNSGFPSWSPDGSAIVYRKWSLATEAPL 569

Query: 200 GANIRYLTPSR-----DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           G +I   T  +     D     P +SP+ +++ +                          
Sbjct: 570 GLHILNFTTGKTHQLTDGWDNTPGWSPDGERIVFTRN----------------------- 606

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           N  +     R+ ++              DIY++    +   R+T++L  +          
Sbjct: 607 NNWTESYGARWYAD------------RFDIYTIRPDGSELTRVTDSLSNDA--------- 645

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           Q V+ S         +M S+G    +     E++ FD  + P G              I 
Sbjct: 646 QYVYPSLFLDFTDGRIMWSSG----QYGFKDESALFDDTFQPYG-------------QIM 688

Query: 375 VMKKDGSQERLLVED-SNLQAPTWSPS 400
           VM  DG+ + L+ +       P + P+
Sbjct: 689 VMNYDGTNKTLVTDTIWEDSMPLYMPN 715


>gi|67524721|ref|XP_660422.1| hypothetical protein AN2818.2 [Aspergillus nidulans FGSC A4]
 gi|40743737|gb|EAA62924.1| hypothetical protein AN2818.2 [Aspergillus nidulans FGSC A4]
 gi|259486257|tpe|CBF83952.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 679

 Score =  109 bits (273), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 57/334 (17%), Positives = 111/334 (33%), Gaps = 88/334 (26%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           + +F    +  G   + L +   +G++ R L P      +   FSP+   + +      D
Sbjct: 63  KGVFYMNRIAPGT--SELYISTANGSSERPLLP-NPIYEYHASFSPSGDWITFTGERSGD 119

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNAT 294
                          + + +  SM  +   S +G  A     ++    +I+ +D+++   
Sbjct: 120 GNSDIYRVRPDGSDLQLLLSTPSMEDSVVLSPDGTLAAYVSTENGYRANIWILDIETGKR 179

Query: 295 ERLTNTLFINIS-----------ASYSPDSSQIVFESDR---------------EGKEQ- 327
             +T+T     S            S+SPD   I F SDR                G E  
Sbjct: 180 WNVTDTPLSRRSVNETLMNGYFRPSWSPDGRWIAFSSDRNTEWRGHGDDTYLGISGWEHT 239

Query: 328 ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-------------- 369
               +Y ++++GS  ++++     S   P WSP G  I + + + E              
Sbjct: 240 QELSIYAVRADGSGFRQLATKPGYSLGSPSWSPDGKRIVYYEMTREATWGAHRPESIDST 299

Query: 370 --------------------------------KFAIGVMKKDGSQERLLVEDS-----NL 392
                                              IG   K  S+E +   D       +
Sbjct: 300 SSIIVSVDFKTGKDRRVEVDVDGVKAFPQYLSNNTIGYHLKGTSKEGIYTTDGVYLNKTI 359

Query: 393 QAPTWSPSGRSLIF--SRKKDGDTGSKLYSIDLN 424
           ++P WSP+G+ +++  +         +LYS + +
Sbjct: 360 RSPAWSPNGQYIVYEKTSWDIRPMAKELYSWNED 393



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 62/327 (18%), Positives = 106/327 (32%), Gaps = 94/327 (28%)

Query: 211 DQILFEPRFSPNQQKVAY--------------------ATYDDEDILRVYLMDTRIDRAP 250
           ++ +  P +SPN Q + Y                      Y   D+        RI    
Sbjct: 356 NKTIRSPAWSPNGQYIVYEKTSWDIRPMAKELYSWNEDWDYRFTDVFPQISNQNRIAMTE 415

Query: 251 KRIGNFR--------------------------------SMILAPRFSSNGKRALI---- 274
           K++GN                                  +    P +S +G+  +     
Sbjct: 416 KQLGNSSIITVKPDASDERMAYDNAKSDLVSSSLVSQGLAGAFQPSWSPDGEWLVFGEGA 475

Query: 275 --SVQKDEAMDIYSVDLQSNATERLT--NTLFINIS------ASYSPDSSQIVF------ 318
               +      +       +  E LT  NT   N S       SYS D S+IVF      
Sbjct: 476 WFQSRASTGGWLVRATANGSEYEVLTASNTSIANTSIMNSGFPSYSHDGSKIVFRVWGAN 535

Query: 319 -ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG--DLIAFTKFSG-EKFAIG 374
             +   G+  L VM  N  +   ++ +       P +SP G  + I FT+ +G   + + 
Sbjct: 536 STNGDTGQLGLRVMDLNTRNITALTNE---WDNLPFFSPAGFEERIVFTRKTGVYNYDVC 592

Query: 375 VMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDG------------DTGSKLYSI 421
            +K DG+   +L     N     WS  GR +++S    G                ++  +
Sbjct: 593 TIKPDGTDLEVLTSSGGNDAHAVWSYDGR-IMYSTGMFGFQYECALYDDTFQPYGQVMIM 651

Query: 422 DLNGRNETLINTPAY-ASDPQWVGFMD 447
           D +G N+ ++    +  S P  V + D
Sbjct: 652 DADGGNKQVLTDSIWEDSMPLLVPYSD 678



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 58/353 (16%), Positives = 114/353 (32%), Gaps = 95/353 (26%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
             T  +G  +    ++  S      + S+  +  DG+  R L       L  P +SP+ +
Sbjct: 218 RNTEWRGHGDD--TYLGISGWEHTQELSIYAVRADGSGFRQLATKPGYSLGSPSWSPDGK 275

Query: 225 KVAY--------------------------ATYDDEDILRVYLMDTRIDRAPKRIGN--- 255
           ++ Y                            +      RV +    +   P+ + N   
Sbjct: 276 RIVYYEMTREATWGAHRPESIDSTSSIIVSVDFKTGKDRRVEVDVDGVKAFPQYLSNNTI 335

Query: 256 -------------------FRSMILAPRFSSNGKRALISVQ----KDEAMDIYSVDLQSN 292
                                  I +P +S NG+  +        +  A ++YS +    
Sbjct: 336 GYHLKGTSKEGIYTTDGVYLNKTIRSPAWSPNGQYIVYEKTSWDIRPMAKELYSWNEDW- 394

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-------- 344
                 +  F ++    S + ++I     + G   +  ++ + SD++    +        
Sbjct: 395 ------DYRFTDVFPQIS-NQNRIAMTEKQLGNSSIITVKPDASDERMAYDNAKSDLVSS 447

Query: 345 -----KEASYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDS--- 390
                  A  F P WSP G+ + F         +     +     +GS+  +L   +   
Sbjct: 448 SLVSQGLAGAFQPSWSPDGEWLVFGEGAWFQSRASTGGWLVRATANGSEYEVLTASNTSI 507

Query: 391 ------NLQAPTWSPSGRSLIF----SRKKDGDTG-SKLYSIDLNGRNETLIN 432
                 N   P++S  G  ++F    +   +GDTG   L  +DLN RN T + 
Sbjct: 508 ANTSIMNSGFPSYSHDGSKIVFRVWGANSTNGDTGQLGLRVMDLNTRNITALT 560



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 25/155 (16%)

Query: 314 SQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGE 369
            + VF  +R   G  +LY+  +NGS ++ +  +    Y    +SP GD I FT  +    
Sbjct: 62  KKGVFYMNRIAPGTSELYISTANGSSERPLLPNPIYEYHA-SFSPSGDWITFTGERSGDG 120

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRN 427
              I  ++ DGS  +LL+   +++ +   SP G    +   ++G   + ++ +D+  G+ 
Sbjct: 121 NSDIYRVRPDGSDLQLLLSTPSMEDSVVLSPDGTLAAYVSTENG-YRANIWILDIETGKR 179

Query: 428 ETLINTP-----------------AYASDPQWVGF 445
             + +TP                 +++ D +W+ F
Sbjct: 180 WNVTDTPLSRRSVNETLMNGYFRPSWSPDGRWIAF 214



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 49/155 (31%), Gaps = 22/155 (14%)

Query: 175 SRILFVS---ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ--QKVAYA 229
           S+I+F      S      +  L VMD    N R +T   ++    P FSP    +++ + 
Sbjct: 525 SKIVFRVWGANSTNGDTGQLGLRVMDL---NTRNITALTNEWDNLPFFSPAGFEERIVFT 581

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR-------------ALISV 276
                    V  +        + + +         +S +G+              AL   
Sbjct: 582 RKTGVYNYDVCTIKPD-GTDLEVLTSSGGNDAHAVWSYDGRIMYSTGMFGFQYECALYDD 640

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                  +  +D      + LT++++ +      P
Sbjct: 641 TFQPYGQVMIMDADGGNKQVLTDSIWEDSMPLLVP 675


>gi|157960820|ref|YP_001500854.1| winged helix family two component response transcriptional
           regulator [Shewanella pealeana ATCC 700345]
 gi|157845820|gb|ABV86319.1| putative two component transcriptional regulator, winged helix
           family [Shewanella pealeana ATCC 700345]
          Length = 715

 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 90/227 (39%), Gaps = 21/227 (9%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPRFSSNGK 270
                P  SP+ + + Y +        +YL D +     PKR+ + +S  +   +S +G 
Sbjct: 185 GSELYPAISPDGRWLVYGSRGSNRYASLYLKDLQNPAETPKRLTSTKSAEIRAVWSPDGS 244

Query: 271 RALISVQKDEAMDIYS--VDLQSNATERL----TNTLFINISASYSPDSSQIVFESDRE- 323
                 +       Y   ++L SN   +L    T +  I+     +PD S++V+  D + 
Sbjct: 245 ALYYGSEYRSEDKCYLTKLNLDSNEALKLGECYTYSSAID----IAPDGSRLVYIWDADE 300

Query: 324 ----GKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVM 376
               G  +L  +  +    KR+  ++D      D  +SP G  +A  +  G     I ++
Sbjct: 301 GFGSGLYEL-TLNRDEQPPKRLSCTEDCSYRDRDAAFSPDGSWLAVARRFGNISEDIFLL 359

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +  +E+ L     +++  +W      LIFS +  G     +  ID
Sbjct: 360 HTETGEEQRLTFGLEDIRGLSWHQDSERLIFSTENSGVRNGYIVGID 406



 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 97/276 (35%), Gaps = 51/276 (18%)

Query: 219 FSPNQQKVAYATYDDEDILR--VYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRAL 273
            +P+  ++ Y    DE        L   R ++ PKR+    +         FS +G    
Sbjct: 285 IAPDGSRLVYIWDADEGFGSGLYELTLNRDEQPPKRLSCTEDCSYRDRDAAFSPDGSWLA 344

Query: 274 ISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           ++ +    + DI+ +  ++   +RLT  L      S+  DS +++F ++  G    Y++ 
Sbjct: 345 VARRFGNISEDIFLLHTETGEEQRLTFGLEDIRGLSWHQDSERLIFSTENSGVRNGYIVG 404

Query: 333 SNGSDQKRISQDK-------------------------------------------EASY 349
            +    + +  +                                            E SY
Sbjct: 405 IDDKQIQSLDVEGMSYPRSIPDSDDVVYSNYMRDYQVASFALEQSIPTATFPLLQVEYSY 464

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR 408
            +P +S     I +         I     DG+Q R   +    +  P+WS  G  + F  
Sbjct: 465 RNPDYSSVTQRIVYVSNETGFNEIWSSDADGNQRRQHTDLKRRVAYPSWSHDGTKVAFLA 524

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWV 443
             D + G+K++ +D+   N +++ TP    + P W 
Sbjct: 525 PDDKNEGNKIHVLDMQTSNISILATPYLDHNRPSWG 560



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 94/230 (40%), Gaps = 20/230 (8%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDI 284
           VA+A +  +D +R Y+   +++     +       L P  S +G+  +   +  +    +
Sbjct: 159 VAWAYHLYQDSIR-YVPTVKLN-----LTTAAGSELYPAISPDGRWLVYGSRGSNRYASL 212

Query: 285 YSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           Y  DLQ+ A   +RLT+T    I A +SPD S + + S+   +++ Y+ + N    + + 
Sbjct: 213 YLKDLQNPAETPKRLTSTKSAEIRAVWSPDGSALYYGSEYRSEDKCYLTKLNLDSNEALK 272

Query: 343 QDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVM----KKDGSQERLL--VED--SNLQ 393
             +  +Y      +P G  + +   + E F  G+      +D    + L   ED     +
Sbjct: 273 LGECYTYSSAIDIAPDGSRLVYIWDADEGFGSGLYELTLNRDEQPPKRLSCTEDCSYRDR 332

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASDPQW 442
              +SP G  L  +R + G+    ++ +    G  + L           W
Sbjct: 333 DAAFSPDGSWLAVAR-RFGNISEDIFLLHTETGEEQRLTFGLEDIRGLSW 381



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 95/288 (32%), Gaps = 63/288 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+   + Y +    +                ++G   +   A   + +G R +     
Sbjct: 239 WSPDGSALYYGSEYRSEDKCYLTKLNLDSNEALKLGECYTYSSAIDIAPDGSRLVYIWDA 298

Query: 279 DEAM----DIYSVDLQSNATERLTNT---LFINISASYSPDSSQIVFESDREGK--EQLY 329
           DE         +++      +RL+ T    + +  A++SPD S +   + R G   E ++
Sbjct: 299 DEGFGSGLYELTLNRDEQPPKRLSCTEDCSYRDRDAAFSPDGSWLA-VARRFGNISEDIF 357

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++ +   +++R++   E       W    + + F+  +       ++  D  Q + L + 
Sbjct: 358 LLHTETGEEQRLTFGLE-DIRGLSWHQDSERLIFSTENSGVRNGYIVGIDDKQIQSL-DV 415

Query: 390 SNLQAPTWSPSGRSLIFS-----------------------------RKKDGDTGS---- 416
             +  P   P    +++S                               ++ D  S    
Sbjct: 416 EGMSYPRSIPDSDDVVYSNYMRDYQVASFALEQSIPTATFPLLQVEYSYRNPDYSSVTQR 475

Query: 417 -----------KLYSIDLNGRN-------ETLINTPAYASDPQWVGFM 446
                      +++S D +G         +  +  P+++ D   V F+
Sbjct: 476 IVYVSNETGFNEIWSSDADGNQRRQHTDLKRRVAYPSWSHDGTKVAFL 523



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 75/203 (36%), Gaps = 16/203 (7%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E+  F++    V    + GI    +  +D +G             +  PR  P+   V 
Sbjct: 385 SERLIFSTENSGVRNGYIVGIDDKQIQSLDVEG-------------MSYPRSIPDSDDVV 431

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y+ Y  +  +  + ++  I  A   +         P +SS  +R +    +    +I+S 
Sbjct: 432 YSNYMRDYQVASFALEQSIPTATFPLLQVEYSYRNPDYSSVTQRIVYVSNETGFNEIWSS 491

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDK 345
           D   N   + T+        S+S D +++ F +  D+    +++V+    S+   I    
Sbjct: 492 DADGNQRRQHTDLKRRVAYPSWSHDGTKVAFLAPDDKNEGNKIHVLDMQTSNIS-ILATP 550

Query: 346 EASYFDPVWSPQGDLIAFTKFSG 368
              +  P W    +++  +   G
Sbjct: 551 YLDHNRPSWGWNDEMVLASSKDG 573


>gi|78212200|ref|YP_380979.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like
           [Synechococcus sp. CC9605]
 gi|78196659|gb|ABB34424.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like
           [Synechococcus sp. CC9605]
          Length = 648

 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 51/290 (17%), Positives = 105/290 (36%), Gaps = 38/290 (13%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-----NSLCVMDRDGANIRYLT 207
           +++H IS    +  T    D  + +  + E       +       L  +  DG       
Sbjct: 14  QLSHWISSPPARPPTQISPDGGTVVFVLEEPGPQPKGEPWRGDQDLWRVPADGNAAPQRW 73

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            S  +  + PR+SP+  ++A+ +        E   ++YL++   D+   ++      I  
Sbjct: 74  ISSPERDWSPRWSPDGTRLAFLSQRKTIGSTEPRTQIYLVNADGDQL-HQLTQLSGNISQ 132

Query: 263 PRFSSNGKRALISVQKDEA---------------MDIYSVDLQSNATERLTNTLFINISA 307
            R+S +G+       +D                   +  + +       ++ +    I  
Sbjct: 133 FRWSPDGRSVAFLSTQDPTVEDGDPQLSNQPRPLTKLNRISISGEELRVISPSGLNVIDF 192

Query: 308 SYSPDSSQIVF-------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +SPD ++I           D     QL V+ S+  + +R   ++       +WSP    
Sbjct: 193 DWSPDGTRIAALISPTATNEDVVNTRQLVVLDSDTGEVERRFSNRIGWNSPLLWSPDSKF 252

Query: 361 I---AFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
           I    ++   G+ ++  ++  D  Q RLL+E   +    P WS   R L+
Sbjct: 253 IHVDIWSPSPGDAWSPALISTDNGQSRLLLEGARATFSDPRWSADSRFLM 302



 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 59/296 (19%), Positives = 103/296 (34%), Gaps = 47/296 (15%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILR---------VYLM 242
            ++ R   +   L+         P  + SP+   V +   +     +         ++ +
Sbjct: 3   WLVHRQHQSDVQLSHWISSPPARPPTQISPDGGTVVFVLEEPGPQPKGEPWRGDQDLWRV 62

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATER 296
               + AP+R  +      +PR+S +G R     Q+      +    IY V+   +   +
Sbjct: 63  PADGNAAPQRWISSPERDWSPRWSPDGTRLAFLSQRKTIGSTEPRTQIYLVNADGDQLHQ 122

Query: 297 LTNTLFINISASYSPDSSQIVFESDR-----EGKEQ----------LYVMQSNGSDQKRI 341
           LT          +SPD   + F S +     +G  Q          L  +  +G + + I
Sbjct: 123 LTQLSGNISQFRWSPDGRSVAFLSTQDPTVEDGDPQLSNQPRPLTKLNRISISGEELRVI 182

Query: 342 SQDKEASYFDPVWSPQGDLI-AFTKFSGEK------FAIGVMKKDGSQ-ERLLVEDSNLQ 393
           S     +  D  WSP G  I A    +           + V+  D  + ER         
Sbjct: 183 SPSGL-NVIDFDWSPDGTRIAALISPTATNEDVVNTRQLVVLDSDTGEVERRFSNRIGWN 241

Query: 394 AP-TWSPSGRSL---IFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVG 444
           +P  WSP  + +   I+S          L S D NG++  L+    A  SDP+W  
Sbjct: 242 SPLLWSPDSKFIHVDIWSPSPGDAWSPALISTD-NGQSRLLLEGARATFSDPRWSA 296



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 82/242 (33%), Gaps = 27/242 (11%)

Query: 175 SRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-- 230
           +R+ F+S+   + S   +  + +++ DG  +  LT     I    R+SP+ + VA+ +  
Sbjct: 90  TRLAFLSQRKTIGSTEPRTQIYLVNADGDQLHQLTQLSGNISQF-RWSPDGRSVAFLSTQ 148

Query: 231 -----------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                       +    L      +      + I      ++   +S +G R    +   
Sbjct: 149 DPTVEDGDPQLSNQPRPLTKLNRISISGEELRVISPSGLNVIDFDWSPDGTRIAALISPT 208

Query: 280 -------EAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQI---VFESDREGKEQL 328
                      +  +D  +     R +N +  N    +SPDS  I   ++          
Sbjct: 209 ATNEDVVNTRQLVVLDSDTGEVERRFSNRIGWNSPLLWSPDSKFIHVDIWSPSPGDAWSP 268

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            ++ ++    + + +   A++ DP WS     +        +  +  + ++    + L  
Sbjct: 269 ALISTDNGQSRLLLEGARATFSDPRWSADSRFLMGQLLKENQTTLVKIDRETGLRQNLSP 328

Query: 389 DS 390
             
Sbjct: 329 SG 330


>gi|20091363|ref|NP_617438.1| hypothetical protein MA2535 [Methanosarcina acetivorans C2A]
 gi|19916497|gb|AAM05918.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
           C2A]
          Length = 560

 Score =  109 bits (273), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 74/179 (41%), Gaps = 2/179 (1%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L + + +   +  +        +   +    +K+ Y     E   +++++D R      R
Sbjct: 162 LYLANLENGTVFPVADDPQISEYWGAWCRLGKKITYTQKAAEIPSQLWIVD-RDGSNKFR 220

Query: 253 IGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +G   ++     +   G R + S    ++  D++ +D       RLTNT     + S+SP
Sbjct: 221 LGTSENVGTGKDWCPLGLRVIYSAKDSEDNSDLWVIDFYGTNQVRLTNTSCNEWNPSFSP 280

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +   I + SD  G   +++    G+ + R++ +  +    P WSP G  I F  ++ E 
Sbjct: 281 NGKWIAYVSDEGGSPDIWLRDIEGNYRSRVTNNTGSPDSVPKWSPDGSKIVFAGYNPEN 339



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 113/297 (38%), Gaps = 19/297 (6%)

Query: 159 SDDIYQSIT--------GEKGDFNSRILFVSESVVSGIIKN-SLCVMDRDGANIRYLTPS 209
           +D++ + IT             + +   ++  +V     +N     M  DG++I      
Sbjct: 74  ADELVEEITFLTDSPESESSPVWTADGQYIMYTVERNDSENLESYRMKADGSSIERTGIG 133

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              +      + N  ++ +    +     +YL +           + +       +   G
Sbjct: 134 EGNLAGFSDINLNGTELIFTKSINSQP-GLYLANLENGTVFPVADDPQISEYWGAWCRLG 192

Query: 270 KRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQ 327
           K+   + +  E    ++ VD   +   RL  +  +     + P   ++++ + D E    
Sbjct: 193 KKITYTQKAAEIPSQLWIVDRDGSNKFRLGTSENVGTGKDWCPLGLRVIYSAKDSEDNSD 252

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           L+V+   G++Q R++ +   + ++P +SP G  IA+    G    I +   +G+    + 
Sbjct: 253 LWVIDFYGTNQVRLT-NTSCNEWNPSFSPNGKWIAYVSDEGGSPDIWLRDIEGNYRSRVT 311

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASD 439
               S    P WSP G  ++F+   + +  S++ S + +   G N    +  A  SD
Sbjct: 312 NNTGSPDSVPKWSPDGSKIVFAGY-NPENNSEINSTNTDMINGSNINGSDIDANGSD 367



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 92/247 (37%), Gaps = 10/247 (4%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                  +    P ++ + Q + Y    +  + L  Y M        +      ++    
Sbjct: 82  TFLTDSPESESSPVWTADGQYIMYTVERNDSENLESYRMKADGSSIERTGIGEGNLAGFS 141

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFE-SD 321
             + NG   + +   +    +Y  +L++     + +   I     ++     +I +    
Sbjct: 142 DINLNGTELIFTKSINSQPGLYLANLENGTVFPVADDPQISEYWGAWCRLGKKITYTQKA 201

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDG 380
            E   QL+++  +GS++ R+   +        W P G  + ++ K S +   + V+   G
Sbjct: 202 AEIPSQLWIVDRDGSNKFRLGTSENVG-TGKDWCPLGLRVIYSAKDSEDNSDLWVIDFYG 260

Query: 381 SQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           + +  L   S N   P++SP+G+ + +   + G     ++  D+ G   + +     + D
Sbjct: 261 TNQVRLTNTSCNEWNPSFSPNGKWIAYVSDEGGS--PDIWLRDIEGNYRSRVTNNTGSPD 318

Query: 440 --PQWVG 444
             P+W  
Sbjct: 319 SVPKWSP 325



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 68/171 (39%), Gaps = 6/171 (3%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL--YVMQSNGSD 337
           ++ +I S D        LT++     S  ++ D   I++  +R   E L  Y M+++GS 
Sbjct: 67  DSGEIISADELVEEITFLTDSPESESSPVWTADGQYIMYTVERNDSENLESYRMKADGSS 126

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-- 395
            +R    +         +  G  + FTK    +  + +   +      + +D  +     
Sbjct: 127 IERTGIGEGNLAGFSDINLNGTELIFTKSINSQPGLYLANLENGTVFPVADDPQISEYWG 186

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-WVGF 445
            W   G+ + ++ +K  +  S+L+ +D +G N+  + T       + W   
Sbjct: 187 AWCRLGKKITYT-QKAAEIPSQLWIVDRDGSNKFRLGTSENVGTGKDWCPL 236


>gi|262198787|ref|YP_003269996.1| hypothetical protein Hoch_5623 [Haliangium ochraceum DSM 14365]
 gi|262082134|gb|ACY18103.1| WD40 domain protein beta Propeller [Haliangium ochraceum DSM 14365]
          Length = 956

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 82/214 (38%), Gaps = 9/214 (4%)

Query: 174 NSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +  ++F   +   G      +   D      + +T        +P  SP+++ VA+    
Sbjct: 350 DGSLVFEQTTSYQGNYSFQDIYRWDVRETAPQPITHG--LRARQPAVSPDERTVAFV-LS 406

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRALISVQKDEAM-DIYSVD 288
            E   R+ LM        + + +       +  P +S +G+R   S  +     DI+  D
Sbjct: 407 GESRSRLALMPLEPYAEHRVVWSGEHRFDQVATPAWSPDGQRIAFSAWESGGYRDIWIFD 466

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           + S    RLT    +++S  +SPD + + + SDR G   +Y  +       +++     +
Sbjct: 467 VASERATRLTRDRALDVSPVFSPDGAYLFYASDRSGIFNIYAHEWATGALYQVTNVIGGA 526

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                 SP G  + +  F    + +  +  + S+
Sbjct: 527 MAAE-ISPDGTRLVYQGFGVGGYDLYELPLERSR 559



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 73/207 (35%), Gaps = 12/207 (5%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI- 274
            PRFS + + + +   D      +  +                 +       +G   +  
Sbjct: 298 NPRFSHDGRYLYWHQSDGLRPGHIRRVAVGEHVGEAEDVTDADRLGDFVVLDDG-SLVFE 356

Query: 275 -SVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            +          DIY  D++  A + +T+ L      + SPD   + F    E + +L +
Sbjct: 357 QTTSYQGNYSFQDIYRWDVRETAPQPITHGL-RARQPAVSPDERTVAFVLSGESRSRLAL 415

Query: 331 MQSNGSDQKRISQDKEASY---FDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLL 386
           M      + R+    E  +     P WSP G  IAF+ +    +  I +      +   L
Sbjct: 416 MPLEPYAEHRVVWSGEHRFDQVATPAWSPDGQRIAFSAWESGGYRDIWIFDVASERATRL 475

Query: 387 VED-SNLQAPTWSPSGRSLIFSRKKDG 412
             D +   +P +SP G  L ++  + G
Sbjct: 476 TRDRALDVSPVFSPDGAYLFYASDRSG 502



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 74/201 (36%), Gaps = 11/201 (5%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           +   +     +Y  D R + AP+ I         P  S + +     +  +    +  + 
Sbjct: 360 SYQGNYSFQDIYRWDVR-ETAPQPIT-HGLRARQPAVSPDERTVAFVLSGESRSRLALMP 417

Query: 289 LQSNATERL---TNTLFINI-SASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQ 343
           L+  A  R+       F  + + ++SPD  +I F +   G  + +++         R+++
Sbjct: 418 LEPYAEHRVVWSGEHRFDQVATPAWSPDGQRIAFSAWESGGYRDIWIFDVASERATRLTR 477

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGR 402
           D+ A    PV+SP G  + +       F I   +        +        A   SP G 
Sbjct: 478 DR-ALDVSPVFSPDGAYLFYASDRSGIFNIYAHEWATGALYQVTNVIGGAMAAEISPDGT 536

Query: 403 SLIFSRKKDGDTGSKLYSIDL 423
            L++  +  G  G  LY + L
Sbjct: 537 RLVY--QGFGVGGYDLYELPL 555


>gi|84497170|ref|ZP_00995992.1| WD40-like Beta Propeller protein [Janibacter sp. HTCC2649]
 gi|84382058|gb|EAP97940.1| WD40-like Beta Propeller protein [Janibacter sp. HTCC2649]
          Length = 352

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 84/203 (41%), Gaps = 27/203 (13%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----- 322
           NG+ + + +        ++ +    A  ++T+  F N  A++SPD +++ F+S R     
Sbjct: 40  NGRISFMRMDDTGHWQTWTANPDLTAQHKITDGDFDNSWAAWSPDGTRLAFDSSRLAPEA 99

Query: 323 -EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAIGVMKK 378
               ++++ M  +G+D  +++         P WSP G  IAFT   G+      I  +  
Sbjct: 100 NGDLKEIFTMAPDGTDVHQVTNLGF-FAGQPTWSPDGRWIAFTTDGGDYPTSQGIYAIHP 158

Query: 379 DGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKDGDT----------GSKLYSID 422
           DG+    +V          L AP +SP G  L ++  + G             S L+++ 
Sbjct: 159 DGTGLHRIVALPAGPRSVWLDAPRFSPDGSRLAYTFFQGGKPTRSPWSWKGETSALWTVG 218

Query: 423 LNGRNETLINTPAY-ASDPQWVG 444
           ++G N   +  P     D  W  
Sbjct: 219 VDGANARQVVAPGQKVGDADWSP 241



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 99/301 (32%), Gaps = 47/301 (15%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           N RI F+                + D      +T   D       +SP+  ++A+ +   
Sbjct: 40  NGRISFMRM---DDTGHWQTWTANPDLTAQHKITDG-DFDNSWAAWSPDGTRLAFDSSRL 95

Query: 234 EDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---IYS 286
                  L +            ++ N       P +S +G+    +    +      IY+
Sbjct: 96  APEANGDLKEIFTMAPDGTDVHQVTNLGFFAGQPTWSPDGRWIAFTTDGGDYPTSQGIYA 155

Query: 287 VDLQSNATERLTNTLFINIS-----ASYSPDSSQIVFESDREGKEQ------------LY 329
           +        R+        S       +SPD S++ +   + GK              L+
Sbjct: 156 IHPDGTGLHRIVALPAGPRSVWLDAPRFSPDGSRLAYTFFQGGKPTRSPWSWKGETSALW 215

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMKKDGSQERLL 386
            +  +G++ +++    +    D  WSP G  + F +     G    +  +   G     L
Sbjct: 216 TVGVDGANARQVVAPGQ-KVGDADWSPDGRHLVFEQMGNDPGSLSRVLRVPATGGGITAL 274

Query: 387 VEDSNLQA-------------PTWSPSGRSLIFSRKKDGDTGS--KLYSIDLNGRNETLI 431
            +D+ L+              P +SP G +++F   +   T     L +++ +G N   +
Sbjct: 275 SQDTGLRGGRSDNWSFQASFDPVYSPDGTTILFPHDEYSPTFGCTSLQAMNADGTNPHWV 334

Query: 432 N 432
           N
Sbjct: 335 N 335



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 13/99 (13%)

Query: 360 LIAFTKFSG-EKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKK----DGD 413
            I+F +      +       D  +Q ++   D +     WSP G  L F   +       
Sbjct: 42  RISFMRMDDTGHWQTWTANPDLTAQHKITDGDFDNSWAAWSPDGTRLAFDSSRLAPEANG 101

Query: 414 TGSKLYSIDLNGRNETLINT-------PAYASDPQWVGF 445
              +++++  +G +   +         P ++ D +W+ F
Sbjct: 102 DLKEIFTMAPDGTDVHQVTNLGFFAGQPTWSPDGRWIAF 140


>gi|218129210|ref|ZP_03458014.1| hypothetical protein BACEGG_00785 [Bacteroides eggerthii DSM 20697]
 gi|317475185|ref|ZP_07934452.1| hypothetical protein HMPREF1016_01431 [Bacteroides eggerthii
           1_2_48FAA]
 gi|217988588|gb|EEC54908.1| hypothetical protein BACEGG_00785 [Bacteroides eggerthii DSM 20697]
 gi|316908638|gb|EFV30325.1| hypothetical protein HMPREF1016_01431 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 1089

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 74/216 (34%), Gaps = 36/216 (16%)

Query: 254 GNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
               S    P +      S +G       + D    IY V  +  A  +LT       + 
Sbjct: 13  TTLTSYAATPLWMRDIQISPDGTEIAFCYKGD----IYKVPAKGGAATQLTTQDSYESNP 68

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD  QI F SDR G   ++VM +NG   +R++ +         ++P G  I F+   
Sbjct: 69  IWSPDGRQIAFASDRYGNFDVFVMPANGGAAQRLTTNSTGE-TPSAFTPDGKYILFSAAI 127

Query: 368 GEKF-----------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG---- 412
            +              +  +   G +   ++     +A  +  SG  L F + + G    
Sbjct: 128 QDPVESALFPRSAMTELYKVPVTGGRTEQVLGTP-AEAICFDKSGN-LFFYQDQKGFEDQ 185

Query: 413 -------DTGSKLYSIDL-NGRNETLINTPAYASDP 440
                       +++ D   G++  L        +P
Sbjct: 186 WRKHHTSSITRDIWTYDTRTGKHSNLTRHAGEDRNP 221



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 85/249 (34%), Gaps = 35/249 (14%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             + V    G        +    + + + SP+  ++A+      DI +V         A 
Sbjct: 2   KKIFVYLTLGFTTLTSYAATPLWMRDIQISPDGTEIAFCY--KGDIYKV----PAKGGAA 55

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            ++    S    P +S +G++   +  +    D++ +     A +RLT        ++++
Sbjct: 56  TQLTTQDSYESNPIWSPDGRQIAFASDRYGNFDVFVMPANGGAAQRLTTNSTGETPSAFT 115

Query: 311 PDSSQIVFESD-----------REGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQG 358
           PD   I+F +            R    +LY +   G   +++     EA  FD      G
Sbjct: 116 PDGKYILFSAAIQDPVESALFPRSAMTELYKVPVTGGRTEQVLGTPAEAICFDKS----G 171

Query: 359 DLIAF------------TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
           +L  +               S     I        +   L       + P  +P G++L 
Sbjct: 172 NLFFYQDQKGFEDQWRKHHTSSITRDIWTYDTRTGKHSNLTRHAGEDRNPILAPDGQTLY 231

Query: 406 FSRKKDGDT 414
           F  +++G +
Sbjct: 232 FLSERNGGS 240



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 52/330 (15%), Positives = 110/330 (33%), Gaps = 40/330 (12%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +D +  K              R             ++   G   +   F      S    
Sbjct: 201 YDTRTGKH---SNLTRHAGEDRNPILAPDGQTLYFLSERNGGSFNVYAFPLAQPESVK-- 255

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
               V D     +R+L+ S +  L    +  + +   Y         +V +  TR D + 
Sbjct: 256 ---AVTDFKTHPVRFLSMSNNGTLC---YGYDGE--IYTQQGGSAPQKVQIEITRDDPSQ 307

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
               N+ +   +   S +GK+    ++     +++        T+++T T       S++
Sbjct: 308 VEYLNYTNGATSATVSPDGKQIGFIIRG----EVFVTSADYATTKQITRTPANESGLSFA 363

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSD-----------QKRISQDKEASYFDPVWSPQGD 359
           PD+  + + S+R G  QLY+ +    +           ++ +          P +SP G 
Sbjct: 364 PDNRTLAYASERNGNWQLYLAKIARKEDPNFPNATIIKEEVLLPSTTVERACPQFSPDGK 423

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRS--LIFSRKKD 411
            +AF +   ++  + V+  +  + R + + S         +  WSP  +   L F   K 
Sbjct: 424 ELAFIE---DRIRLMVLNLETKKVRQITDGSTWYSTNGEFSYAWSPDSKWFTLEFIGNKH 480

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            D  S +  +   G +  +  T +      
Sbjct: 481 -DPYSDIGLVSAQGNSPIINLTNSGYMSGS 509



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 85/255 (33%), Gaps = 32/255 (12%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
             ++   S   K  + +   D + + YL  +          SP+ +++ +    +     
Sbjct: 284 IYTQQGGSAPQKVQIEITRDDPSQVEYLNYTNGATSA--TVSPDGKQIGFIIRGE----- 336

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
              + +      K+I    +      F+ + +    + +++    +Y   +         
Sbjct: 337 -VFVTSADYATTKQITRTPANESGLSFAPDNRTLAYASERNGNWQLYLAKIARKEDPNFP 395

Query: 299 NTLFINIS------------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           N   I                 +SPD  ++ F  DR    +L V+       ++I+    
Sbjct: 396 NATIIKEEVLLPSTTVERACPQFSPDGKELAFIEDRI---RLMVLNLETKKVRQITDGST 452

Query: 347 ASY----FDPVWSPQGDL--IAFTKFSGEKF-AIGVMKKDGSQERL-LVEDSNLQ-APTW 397
                  F   WSP      + F     + +  IG++   G+   + L     +  +P +
Sbjct: 453 WYSTNGEFSYAWSPDSKWFTLEFIGNKHDPYSDIGLVSAQGNSPIINLTNSGYMSGSPRF 512

Query: 398 SPSGRSLIFSRKKDG 412
           +  G +++F  ++ G
Sbjct: 513 ALDGNAILFKTERYG 527



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 57/368 (15%), Positives = 129/368 (35%), Gaps = 57/368 (15%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             V  +GK     +   ++ V        K+   +PA+   ++    +      +   G+
Sbjct: 320 ATVSPDGKQIGFIIRGEVF-VTSADYATTKQITRTPANESGLSFAPDNRTLAYASERNGN 378

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +   +  ++          ++            L PS       P+FSP+ +++A+    
Sbjct: 379 WQLYLAKIARKEDPNFPNATII-------KEEVLLPSTTVERACPQFSPDGKELAFI--- 428

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSM-----ILAPRFSSNGKR--ALISVQK-DEAMDI 284
            ED +R+ +++    +  ++I +  +        +  +S + K         K D   DI
Sbjct: 429 -EDRIRLMVLNLET-KKVRQITDGSTWYSTNGEFSYAWSPDSKWFTLEFIGNKHDPYSDI 486

Query: 285 YSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREG-----------KEQLYVMQ 332
             V  Q N+    LTN+ +++ S  ++ D + I+F+++R G              L  + 
Sbjct: 487 GLVSAQGNSPIINLTNSGYMSGSPRFALDGNAILFKTERYGMRAHASWGSQDDAMLIFLN 546

Query: 333 SNGSDQKRISQDKE----------------ASYFDPVWSP---QGDLIAFTKFSGEKFAI 373
            +  D+  +S++                   +  D   S      D         +   +
Sbjct: 547 QDAYDKYCLSKEDYELRKELEAEQKKAQGKDAGKDKKKSQKDTGKDKADDDSPQVKDIIV 606

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN- 432
            +   +    RL    S++ +   S  G +L +      + G  L+ +DL  +   L++ 
Sbjct: 607 ELKNLEDRIVRLTPNSSDMGSVIISKDGETLYYLA--AFEDGYDLWKMDLRKKETRLLHK 664

Query: 433 -TPAYASD 439
               +AS 
Sbjct: 665 MDAGWASM 672


>gi|270294523|ref|ZP_06200725.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270275990|gb|EFA21850.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 1090

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 71/220 (32%), Gaps = 34/220 (15%)

Query: 253 IGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +         P +      S +G       + D    IY V  +     +LT       +
Sbjct: 12  LTAIAGHAATPLWMRDVQISPDGTEIAFCYKGD----IYKVPAKGGTATQLTTQESYECT 67

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPD  QI F SDR G   ++VM ++G   +R++           ++P G  I F+  
Sbjct: 68  PIWSPDGKQIAFASDRYGNFDVFVMPADGGTAQRLTTHSTGE-IPSTFTPDGKYILFSAS 126

Query: 367 -----------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD---- 411
                      +     +  +   G +   ++     +A  +  +G+  ++  +K     
Sbjct: 127 IQDPASSALFPTSAMTELYKVPATGGRTEQVLGTP-AEAVCFDKAGQQFLYQDRKGFEDE 185

Query: 412 ------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                       ++  D   G +  L +      +P    
Sbjct: 186 WRKHHTSSITRDIWLYDAKTGIHTNLTDRAGEDRNPVLSP 225



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 76/221 (34%), Gaps = 35/221 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S    P +S +GK+   +  +
Sbjct: 30  ISPDGTEIAFCY--KGDIYKV----PAKGGTATQLTTQESYECTPIWSPDGKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
               D++ +       +RLT      I ++++PD   I+F +                 +
Sbjct: 84  YGNFDVFVMPADGGTAQRLTTHSTGEIPSTFTPDGKYILFSASIQDPASSALFPTSAMTE 143

Query: 328 LYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIG 374
           LY + + G   +++     EA  FD      G    +               S     I 
Sbjct: 144 LYKVPATGGRTEQVLGTPAEAVCFDKA----GQQFLYQDRKGFEDEWRKHHTSSITRDIW 199

Query: 375 VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDT 414
           +          L +     + P  SP GR++ F  +++G +
Sbjct: 200 LYDAKTGIHTNLTDRAGEDRNPVLSPDGRTVYFLSERNGGS 240



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 104/323 (32%), Gaps = 81/323 (25%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +  I   + + D     I      R      P  SP+ + V + +  +     VY     
Sbjct: 191 TSSITRDIWLYDAK-TGIHTNLTDRAGEDRNPVLSPDGRTVYFLSERNGGSFNVYAFPLA 249

Query: 246 IDRAPKRIGNFRSM---------------------------------------------- 259
             R  K I +F++                                               
Sbjct: 250 QPREVKPITSFKTHPVRFLSMSDGGTLCYGYDGEIYTQQPDATPKKVAIEIVRDDQPQFA 309

Query: 260 -------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                    +   S +GK+   +++     +++        T+++T+T       S++PD
Sbjct: 310 NLQSSDGATSAVVSPDGKQIAFTLRG----EVFVTSADYATTKQVTHTPAREAGLSFAPD 365

Query: 313 SSQIVFESDREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +  + + S+R G  QLY+             +   +++ +          P +SP G  +
Sbjct: 366 NRTLAYASERGGNWQLYLAKITRKEDPNFPNATLIEEEVLLPSTTVERAYPQFSPDGKEL 425

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFSRKKDGD 413
           AF +   ++  + V+  +  + R + + S   +        WSP G+   L F+  K  D
Sbjct: 426 AFIE---DRIRLMVLNLETKKVRQITDGSTWYSTGGGFDYAWSPDGKWFTLEFTGNKH-D 481

Query: 414 TGSKLYSIDLNGRNETLINTPAY 436
             S +  +   G  + +  T + 
Sbjct: 482 PYSDIGLVSAEGGKDIINLTNSG 504



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 81/231 (35%), Gaps = 30/231 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            ++              SP+ +++A+    +        + +      K++ +  +    
Sbjct: 306 PQFANLQSSDGATSAVVSPDGKQIAFTLRGE------VFVTSADYATTKQVTHTPAREAG 359

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS------------ASYS 310
             F+ + +    + ++     +Y   +         N   I                 +S
Sbjct: 360 LSFAPDNRTLAYASERGGNWQLYLAKITRKEDPNFPNATLIEEEVLLPSTTVERAYPQFS 419

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDL--IAFT 364
           PD  ++ F  DR    +L V+       ++I+           FD  WSP G    + FT
Sbjct: 420 PDGKELAFIEDRI---RLMVLNLETKKVRQITDGSTWYSTGGGFDYAWSPDGKWFTLEFT 476

Query: 365 KFSGEKF-AIGVMKKDGSQERL-LVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
               + +  IG++  +G ++ + L     +   P ++  G +++F+ ++ G
Sbjct: 477 GNKHDPYSDIGLVSAEGGKDIINLTNSGYMSGYPRFALDGNAILFTTERYG 527



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 113/357 (31%), Gaps = 100/357 (28%)

Query: 166 ITGEKGDFNSRILFVSESVVSGI------IKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           +T   G   + +      +           K  +  +   G     LT  ++     P +
Sbjct: 12  LTAIAGHAATPLWMRDVQISPDGTEIAFCYKGDIYKVPAKGGTATQLTT-QESYECTPIW 70

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +++A+A+    +   V++M        +R+    +  +   F+ +GK  L S    
Sbjct: 71  SPDGKQIAFASDRYGN-FDVFVMPAD-GGTAQRLTTHSTGEIPSTFTPDGKYILFSASIQ 128

Query: 280 E-----------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---- 324
           +             ++Y V      TE++  T    +   +     Q +++ DR+G    
Sbjct: 129 DPASSALFPTSAMTELYKVPATGGRTEQVLGTPAEAV--CFDKAGQQFLYQ-DRKGFEDE 185

Query: 325 ---------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFA-- 372
                       +++  +       ++ D+     +PV SP G  + F ++ +G  F   
Sbjct: 186 WRKHHTSSITRDIWLYDAKTGIHTNLT-DRAGEDRNPVLSPDGRTVYFLSERNGGSFNVY 244

Query: 373 ---------------------------------------IGVMKKDGSQERLLVEDSNLQ 393
                                                  I   + D + +++ +E     
Sbjct: 245 AFPLAQPREVKPITSFKTHPVRFLSMSDGGTLCYGYDGEIYTQQPDATPKKVAIEIVRDD 304

Query: 394 APTW--------------SPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPA 435
            P +              SP G+ + F+ +       +++    +    + + +TPA
Sbjct: 305 QPQFANLQSSDGATSAVVSPDGKQIAFTLR------GEVFVTSADYATTKQVTHTPA 355



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 93/243 (38%), Gaps = 31/243 (12%)

Query: 95  DSIPRFQDWNSL-GAQVLVTGRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
           D  P+F +  S  GA   V   V  +GK     +   ++ V        K+   +PA  R
Sbjct: 303 DDQPQFANLQSSDGATSAV---VSPDGKQIAFTLRGEVF-VTSADYATTKQVTHTPA--R 356

Query: 153 KIAHTISDD--IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           +   + + D       +   G++   +  ++          +L            L PS 
Sbjct: 357 EAGLSFAPDNRTLAYASERGGNWQLYLAKITRKEDPNFPNATLI-------EEEVLLPST 409

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRF 265
                 P+FSP+ +++A+     ED +R+ +++    +  ++I +              +
Sbjct: 410 TVERAYPQFSPDGKELAFI----EDRIRLMVLNLET-KKVRQITDGSTWYSTGGGFDYAW 464

Query: 266 SSNGKR--ALISVQK-DEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESD 321
           S +GK      +  K D   DI  V  +       LTN+ +++    ++ D + I+F ++
Sbjct: 465 SPDGKWFTLEFTGNKHDPYSDIGLVSAEGGKDIINLTNSGYMSGYPRFALDGNAILFTTE 524

Query: 322 REG 324
           R G
Sbjct: 525 RYG 527


>gi|88802849|ref|ZP_01118376.1| acylaminoacyl-peptidase [Polaribacter irgensii 23-P]
 gi|88781707|gb|EAR12885.1| acylaminoacyl-peptidase [Polaribacter irgensii 23-P]
          Length = 679

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 109/269 (40%), Gaps = 36/269 (13%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
               + +L +++ DG++ R LT SR+    + ++SP+  ++A+ +   ++   VY+   +
Sbjct: 60  KDTSRGNLWIINSDGSSNRKLT-SREVNESQAKWSPSGDRIAFVS-GTKEGSEVYMYWVQ 117

Query: 246 IDRAPKRIGNFRSMILAP---RFSSNGKRALISVQ-KDEAMDIYSVDLQSNATE-----R 296
                 +I     + +AP    +S +G +   ++    ++  I  +  +          R
Sbjct: 118 TG----QIAKLSQLEMAPGNLSWSPDGTQIAFTMFVAKKSPVIVKMPAKPKGASWAKAAR 173

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T+ L          D S  +    + G   L+++ + G   ++I+ D         +SP
Sbjct: 174 ITDRLKHEA------DGSGYM----QPGFTHLFILPAEGGTPRQITSDDYNHSGSLSFSP 223

Query: 357 QGDLIAFTKFSGEKFA-------IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSR 408
            G  I F+    E +        +  +  +     +L        AP  SP+G+ + F  
Sbjct: 224 NGKEIYFSANRVEDWEYDFRNSEVYKVDINSRIITVLTSQNGPDYAPKVSPNGKLIAFLG 283

Query: 409 KKD---GDTGSKLYSIDLNGRNETLINTP 434
            +D       + LY ++L+G N  +++  
Sbjct: 284 FEDKVQAHQNTLLYIMNLDGSNRKVVSGN 312



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 98/297 (32%), Gaps = 69/297 (23%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP---RFSPNQQKVAYATY 231
            RI FVS +   G       V  + G   +       Q+   P    +SP+  ++A+  +
Sbjct: 97  DRIAFVSGT-KEGSEVYMYWV--QTGQIAKL-----SQLEMAPGNLSWSPDGTQIAFTMF 148

Query: 232 DDEDILRVYLMDTRI--------------------------------------DRAPKRI 253
             +    +  M  +                                          P++I
Sbjct: 149 VAKKSPVIVKMPAKPKGASWAKAARITDRLKHEADGSGYMQPGFTHLFILPAEGGTPRQI 208

Query: 254 GNFR-SMILAPRFSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLTNTLFINI 305
            +   +   +  FS NGK    S  + E         ++Y VD+ S     LT+    + 
Sbjct: 209 TSDDYNHSGSLSFSPNGKEIYFSANRVEDWEYDFRNSEVYKVDINSRIITVLTSQNGPDY 268

Query: 306 SASYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +   SP+   I F    +         LY+M  +GS++K +S + + S  +  W   G  
Sbjct: 269 APKVSPNGKLIAFLGFEDKVQAHQNTLLYIMNLDGSNRKVVSGNFDNSISNISWDSSGKG 328

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWS-----PSGRSLIFSRKK 410
           +  T        +  +  +G   +L   +  + +  P  S         ++++++ +
Sbjct: 329 LYCTYDEKGNSKVAHISTNGKLMKLADNLGGTTIGRPYASGSYTVADNGTIVYTQSR 385



 Score = 75.4 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 69/416 (16%), Positives = 141/416 (33%), Gaps = 60/416 (14%)

Query: 17  LCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVV------- 69
           L +  + I GF   S             + P+ +   ++ S  ++    S+++       
Sbjct: 4   LLIFSLFILGFQNISAQEQ------KIAFQPLDVFSLEWASDPQISPDASQIIYRRNGFD 57

Query: 70  -SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD-WNSLGAQVLVTGRVIKEGKDRLRVE 127
             KD  R     +I+ D    +      +   Q  W+  G   +      KEG      E
Sbjct: 58  IMKDTSR-GNLWIINSDGSSNRKLTSREVNESQAKWSPSG-DRIAFVSGTKEGS-----E 110

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWR------KIAHTI-----SDDIYQSITGEKGDFNSR 176
             ++ V+  +     +   +P +        +IA T+     S  I +     KG   ++
Sbjct: 111 VYMYWVQTGQIAKLSQLEMAPGNLSWSPDGTQIAFTMFVAKKSPVIVKMPAKPKGASWAK 170

Query: 177 ILFVSES-----VVSGIIK---NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              +++        SG ++     L ++  +G   R +T           FSPN +++ +
Sbjct: 171 AARITDRLKHEADGSGYMQPGFTHLFILPAEGGTPRQITSDDYNHSGSLSFSPNGKEIYF 230

Query: 229 ATYDDEDILR------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQ 277
           +    ED         VY +D    R    + +      AP+ S NGK          VQ
Sbjct: 231 SANRVEDWEYDFRNSEVYKVDIN-SRIITVLTSQNGPDYAPKVSPNGKLIAFLGFEDKVQ 289

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +   +Y ++L  +  + ++     +IS  S+      +    D +G  ++  + +NG 
Sbjct: 290 AHQNTLLYIMNLDGSNRKVVSGNFDNSISNISWDSSGKGLYCTYDEKGNSKVAHISTNGK 349

Query: 337 DQKRISQDKEASYFDPVWS-----PQGDLIAFTKFSGE-KFAIGVMKKDGSQERLL 386
             K        +   P  S          I +T+   E    + V++      ++ 
Sbjct: 350 LMKLADNLGGTTIGRPYASGSYTVADNGTIVYTQSRPEYPAELAVIQNKKGPHQIT 405



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 58/154 (37%), Gaps = 12/154 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNF 256
           + I  +  S++   + P+ SPN + +A+  ++D+        +Y+M+          GNF
Sbjct: 254 SRIITVLTSQNGPDYAPKVSPNGKLIAFLGFEDKVQAHQNTLLYIMNLDGSNRKVVSGNF 313

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI------SASYS 310
            + I    + S+GK    +  +     +  +        +L + L          S SY+
Sbjct: 314 DNSISNISWDSSGKGLYCTYDEKGNSKVAHISTNGK-LMKLADNLGGTTIGRPYASGSYT 372

Query: 311 -PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
             D+  IV+   R        +  N     +I+ 
Sbjct: 373 VADNGTIVYTQSRPEYPAELAVIQNKKGPHQITH 406


>gi|159030449|emb|CAO91350.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 703

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 102/315 (32%), Gaps = 46/315 (14%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            V+     R           ++W+V   +++                        +++TG
Sbjct: 425 SVVYSPDGRYLASGSSDNTIKIWEVATGREL------------------------RTLTG 460

Query: 169 EKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                 S +       + SG   N++ + +               I++   +SP+ + +A
Sbjct: 461 HYSFVRSVVYSPDGRYLASGSSDNTIKIWEVATEKEFRKLTGHSNIVWSVVYSPDGRYLA 520

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             +YD      + + +    R  + +     ++ +  +S +G+    S   D  + I+ V
Sbjct: 521 SGSYDK----TIKIWEVATGRELRTLAVHTDLVSSVVYSPDGRYLA-SGSWDNTIKIWEV 575

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                    LT       S  YSPD   +   S       + + +     + R       
Sbjct: 576 -ATGRELRTLTGHSDRVESVVYSPDGRYLASGS---WDNTIKIWEVATGRELRTLTGHSL 631

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIF 406
             +   +SP G  +A +    +   I  ++  G + R L      + +  +SP GR L  
Sbjct: 632 GVYSVTYSPDGRYLA-SGSDDKTIKIWEVET-GKELRTLTGHSRGVYSVAYSPDGRYLA- 688

Query: 407 SRKKDGDTGSKLYSI 421
                 D   K++ +
Sbjct: 689 --SGSLDKTIKIWRV 701



 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 98/283 (34%), Gaps = 16/283 (5%)

Query: 164 QSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +++TG  G   S +       + SG   N++ + +                +    +SP+
Sbjct: 414 KTLTGHSGKVESVVYSPDGRYLASGSSDNTIKIWEVATGRELRTLTGHYSFVRSVVYSPD 473

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A  + D+     + + +   ++  +++    +++ +  +S +G+    S   D+ +
Sbjct: 474 GRYLASGSSDN----TIKIWEVATEKEFRKLTGHSNIVWSVVYSPDGRYLA-SGSYDKTI 528

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L     +  S  YSPD   +   S       + + +     + R  
Sbjct: 529 KIWEV-ATGRELRTLAVHTDLVSSVVYSPDGRYLASGS---WDNTIKIWEVATGRELRTL 584

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSG 401
                     V+SP G  +A   +      I  +   G + R L   S  + + T+SP G
Sbjct: 585 TGHSDRVESVVYSPDGRYLASGSWDNT-IKIWEV-ATGRELRTLTGHSLGVYSVTYSPDG 642

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           R L        D   K++ ++      TL           +  
Sbjct: 643 RYLASGSD---DKTIKIWEVETGKELRTLTGHSRGVYSVAYSP 682



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/198 (11%), Positives = 62/198 (31%), Gaps = 34/198 (17%)

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPA 149
            +   ++  +L     +   V+     R           ++W+V   +++          
Sbjct: 532 EVATGRELRTLAVHTDLVSSVVYSPDGRYLASGSWDNTIKIWEVATGRELRTLT------ 585

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
                 H  SD +   +    G            + SG   N++ + +            
Sbjct: 586 -----GH--SDRVESVVYSPDG----------RYLASGSWDNTIKIWEVATGRELRTLTG 628

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               ++   +SP+ + +A  + D      + + +    +  + +      + +  +S +G
Sbjct: 629 HSLGVYSVTYSPDGRYLASGSDDK----TIKIWEVETGKELRTLTGHSRGVYSVAYSPDG 684

Query: 270 KRALISVQKDEAMDIYSV 287
           +    S   D+ + I+ V
Sbjct: 685 RYLA-SGSLDKTIKIWRV 701


>gi|134084093|emb|CAK43122.1| unnamed protein product [Aspergillus niger]
          Length = 675

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 75/198 (37%), Gaps = 25/198 (12%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           + L V + DG+N R L  +     +  ++SP+ + + + +    D               
Sbjct: 60  SELYVANADGSNPRLLLGNESTFDYHAQWSPDGEWIVFTSERAGDGQSDLYRVRPNGTDL 119

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNT--------- 300
           + I    ++  A   S NG     +    +   +I+  +L + A   +TN+         
Sbjct: 120 QPIATSPAVEDAGAISPNGSLVAFAGTLGNYKSNIWIQNLDTGALWNVTNSTEVAGDYTL 179

Query: 301 LFINISASYSPDSSQIVFESDREGKEQ---------------LYVMQSNGSDQKRISQDK 345
              +   ++SPD   +VF SDR    +               +Y ++ +G+  +R++   
Sbjct: 180 PDGHFRPAWSPDGEWLVFTSDRNTPWRGHNNISGWEHTQELSIYAIRPDGTGFRRVANRT 239

Query: 346 EASYFDPVWSPQGDLIAF 363
                 P +SP G+ I F
Sbjct: 240 GYCQGSPKFSPDGNRIVF 257



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 74/201 (36%), Gaps = 28/201 (13%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
             I  +Y+ +         +GN  +     ++S +G+  + + ++  D   D+Y V    
Sbjct: 57  PGISELYVANADGSNPRLLLGNESTFDYHAQWSPDGEWIVFTSERAGDGQSDLYRVRPNG 116

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKE---- 346
              + +  +  +  + + SP+ S + F       K  +++   +      ++   E    
Sbjct: 117 TDLQPIATSPAVEDAGAISPNGSLVAFAGTLGNYKSNIWIQNLDTGALWNVTNSTEVAGD 176

Query: 347 ----ASYFDPVWSPQGDLIAFTKFSGEKFA---------------IGVMKKDGSQERLLV 387
                 +F P WSP G+ + FT      +                I  ++ DG+  R + 
Sbjct: 177 YTLPDGHFRPAWSPDGEWLVFTSDRNTPWRGHNNISGWEHTQELSIYAIRPDGTGFRRVA 236

Query: 388 EDSNLQ--APTWSPSGRSLIF 406
             +     +P +SP G  ++F
Sbjct: 237 NRTGYCQGSPKFSPDGNRIVF 257



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 62/141 (43%), Gaps = 20/141 (14%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGS 381
           G  +LYV  ++GS+ + +  ++    +   WSP G+ I FT       +  +  ++ +G+
Sbjct: 58  GISELYVANADGSNPRLLLGNESTFDYHAQWSPDGEWIVFTSERAGDGQSDLYRVRPNGT 117

Query: 382 QERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINT------ 433
             + +     ++     SP+G  + F+    G+  S ++  +L+ G    + N+      
Sbjct: 118 DLQPIATSPAVEDAGAISPNGSLVAFAGTL-GNYKSNIWIQNLDTGALWNVTNSTEVAGD 176

Query: 434 ---------PAYASDPQWVGF 445
                    PA++ D +W+ F
Sbjct: 177 YTLPDGHFRPAWSPDGEWLVF 197



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 87/273 (31%), Gaps = 49/273 (17%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR---------APKRIGNFRSMILAPRFS 266
            P+ S    KV Y +    +   V +                  +   +  +      + 
Sbjct: 401 FPQMSAQG-KVVYTSQQTVNSSLVTMNADGTGSNDIFDGSRFPVRVNSSNTNGTFQGSWR 459

Query: 267 SNGKRAL------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-- 318
            +G+            +      +Y V    +    +TN        + SPD   +V+  
Sbjct: 460 GDGEVLAVGLGDWFEYRYANPGWVYLVAANGSWARSMTNGSTNAGFPTISPDGRWLVWRE 519

Query: 319 ----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKFS------ 367
                S+      L  M     D   +S   + +   P+++P G + I FT+ +      
Sbjct: 520 FAYSASEDPIPLGLRRMDLTTGDVVALSSSWDNT---PMFAPDGSNRIVFTRRTSWPISG 576

Query: 368 --GEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSR------------KKDG 412
              + + +  M  DGS  R L + + N     W+  G+ + ++               + 
Sbjct: 577 PLDDNYDVMTMAVDGSDVRQLTKLACNDAHAVWTHEGK-IAWATGMFGFQDEATIYDNNQ 635

Query: 413 DTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
                +  ++ +G N T++    +  + P ++ 
Sbjct: 636 QPYPFIMQMEADGSNWTVLTQSRWEDTMPLYIP 668



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 104/350 (29%), Gaps = 91/350 (26%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA------------- 229
           S      + S+  +  DG   R +          P+FSP+  ++ +              
Sbjct: 212 SGWEHTQELSIYAIRPDGTGFRRVANRTGYCQGSPKFSPDGNRIVFYELPMELTYYARVA 271

Query: 230 ---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG------KRALISVQKDE 280
               YD    +      T  DR     G    + L P++  N       K  L +     
Sbjct: 272 EPAFYDVNTAIVSVDFATGTDRQVHASGESGGIKLFPQYVDNQTIGYLVKSLLTNATYPG 331

Query: 281 AMDIYSVDLQSNATERLTNTL--FINISASYSPDS------------------------- 313
           +++  +   Q + +    N      + S ++SPD                          
Sbjct: 332 SINYTAAQPQGSVSAAYRNASLVGYHRSPAWSPDGGHMVYEHVEWDPVRPINKPLYSWSK 391

Query: 314 ----------------SQIVFESDREGKEQLYVMQSNGSD----------QKRISQDKEA 347
                            ++V+ S +     L  M ++G+             R++     
Sbjct: 392 DWEYRFSDVFPQMSAQGKVVYTSQQTVNSSLVTMNADGTGSNDIFDGSRFPVRVNSSNTN 451

Query: 348 SYFDPVWSPQGDLIA------FTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPS 400
             F   W   G+++A      F         + ++  +GS  R +   S N   PT SP 
Sbjct: 452 GTFQGSWRGDGEVLAVGLGDWFEYRYANPGWVYLVAANGSWARSMTNGSTNAGFPTISPD 511

Query: 401 GRSLIF----SRKKDGDTGSKLYSIDLNGRNETLI-----NTPAYASDPQ 441
           GR L++        +      L  +DL   +   +     NTP +A D  
Sbjct: 512 GRWLVWREFAYSASEDPIPLGLRRMDLTTGDVVALSSSWDNTPMFAPDGS 561



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +   + +     + V   DGS  RLL+  E +      WSP G  ++F+ ++ GD  S L
Sbjct: 50  MLMNRIAPGISELYVANADGSNPRLLLGNESTFDYHAQWSPDGEWIVFTSERAGDGQSDL 109

Query: 419 YSIDLNGRNETLINT 433
           Y +  NG +   I T
Sbjct: 110 YRVRPNGTDLQPIAT 124



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 66/177 (37%), Gaps = 25/177 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK- 251
           + ++  +G+  R +T       F P  SP+ + + +  +          +  R       
Sbjct: 483 VYLVAANGSWARSMTNGSTNAGF-PTISPDGRWLVWREFAYSASEDPIPLGLRRMDLTTG 541

Query: 252 -RIGNFRSMILAPRFSSNG-KRALISVQK--------DEAMDIYSVDLQSNATERLTNTL 301
             +    S    P F+ +G  R + + +         D+  D+ ++ +  +   +LT   
Sbjct: 542 DVVALSSSWDNTPMFAPDGSNRIVFTRRTSWPISGPLDDNYDVMTMAVDGSDVRQLTKLA 601

Query: 302 FINISASYSPDSS-------------QIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             +  A ++ +                 +++++++    +  M+++GS+   ++Q +
Sbjct: 602 CNDAHAVWTHEGKIAWATGMFGFQDEATIYDNNQQPYPFIMQMEADGSNWTVLTQSR 658


>gi|121585935|ref|ZP_01675728.1| MdsD protein [Vibrio cholerae 2740-80]
 gi|121549871|gb|EAX59891.1| MdsD protein [Vibrio cholerae 2740-80]
          Length = 1001

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 43/254 (16%)

Query: 211 DQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           D     P +      SP+ QK+A+             +          +         P 
Sbjct: 32  DSTQARPTWLRDIALSPDGQKIAFTYAGQ------IWLVPAQGGDAVALTESGVYSETPI 85

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S + +    +  +    D++ + +Q   + RLT     +I  ++S D  Q+ F S R G
Sbjct: 86  WSPDSQSIAFTADRYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLG 145

Query: 325 KE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            +             QLY + + G  ++R+      +  D   SP    I +T       
Sbjct: 146 DDKANANVKQGSFMAQLYSVPAAGGREQRVL---PIAISDLAISPSHSDILYTNQPSDEQ 202

Query: 367 -------SGEKFAIG-VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  S     I       G   ++       + P WS  G S+ +  ++ G     +
Sbjct: 203 PWRKGALSDATRDIWQWSPLTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSF--NV 260

Query: 419 YSIDLNGRNETLIN 432
           +    +G     I 
Sbjct: 261 WQQRFDGSEPVQIT 274



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 30/205 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G++   +     A  I+ V  Q      LT +   + +  +SPDS  I F +DR 
Sbjct: 45  ALSPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRY 100

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------ 371
           G   ++++   G + +R++    A      +S  G  + F+                   
Sbjct: 101 GLGDVFILSIQGGESRRLTYHG-AKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFM 159

Query: 372 -AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYS 420
             +  +   G +E+ ++    +     SPS   ++++ +             D    ++ 
Sbjct: 160 AQLYSVPAAGGREQRVL-PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQ 218

Query: 421 ID-LNGRNETLINTPAYASDPQWVG 444
              L G++  +        +P W  
Sbjct: 219 WSPLTGKHTQITTFRGEDRNPVWSA 243



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 98/331 (29%), Gaps = 89/331 (26%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRID 247
           G + R        I +   FS + Q++ +++    D            + ++Y +     
Sbjct: 113 GESRRLTYHGAKDIPY--AFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAGG 170

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIYSVDLQSNATE 295
           R  + +      I     S +    L + Q             D   DI+     +    
Sbjct: 171 REQRVL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQWSPLTGKHT 227

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------------ 343
           ++T     + +  +S D S + + S++ G   ++  + +GS+  +I+             
Sbjct: 228 QITTFRGEDRNPVWSADGSSMYYLSEQAGSFNVWQQRFDGSEPVQITDHQKLPVRFLSAS 287

Query: 344 ---DKEASYFDPVW--------------------SPQGDLIAFTKFSGEKF--------- 371
              D    +   +W                     P G           +          
Sbjct: 288 LQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEATEMVVAPNAAEV 347

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT---------G 415
                  + V+       + + +    +   ++S  G  LI++ +++G           G
Sbjct: 348 AIVARGDVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSYVNDG 407

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            K +S  L+   E ++ T      P +   +
Sbjct: 408 GKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 341 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDVSFSSDGYRLIYASERE 394

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   +                  LT    + I   YSP+  +IV+   RE +  L
Sbjct: 395 GSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDV-IQPLYSPNLKRIVY---RENRNTL 450

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + I     +     I ++K DGS+ 
Sbjct: 451 KVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEA 510

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNG 425
            + L +    + AP +S  G+ + +     G  D    +   D+ G
Sbjct: 511 PINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDMVVQYDVYG 556



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 99/286 (34%), Gaps = 41/286 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------KVAYATYDDEDILRVYLMDTR 245
           +     DG+    +T  +   +     S           ++       +   +V +   R
Sbjct: 260 VWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRR 319

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +   NF         + N     I  + D    +Y V L S  T+R+T+T    
Sbjct: 320 SAMPDGRHNVNFNLEATEMVVAPNAAEVAIVARGD----VYVVSLLSGLTQRITDTPEAE 375

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPV 353
              S+S D  ++++ S+REG   LY    N             ++  ++ +++     P+
Sbjct: 376 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQD--VIQPL 433

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIF 406
           +SP    I + +       + V   +  +   L++   L +         WSP    ++ 
Sbjct: 434 YSPNLKRIVYRENRNT---LKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVT 490

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGFM 446
             +   +   +L   D +     L  +      P +++D QWV ++
Sbjct: 491 RDRAMSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWL 536



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 19/174 (10%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+  +   ++ + Y+ D        +D   + +      ++ P +S N 
Sbjct: 379 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR +    ++    +   D++ + T  L +   +      ++S  +SPDS  IV   DR 
Sbjct: 439 KRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV-TRDRA 494

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                + +++ +GS+          S F P +S  G  + +   +     I  M
Sbjct: 495 MSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDM 548


>gi|70986621|ref|XP_748801.1| Pfs, NACHT and WD domain protein [Aspergillus fumigatus Af293]
 gi|66846431|gb|EAL86763.1| Pfs, NACHT and WD domain protein [Aspergillus fumigatus Af293]
          Length = 1454

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 56/314 (17%), Positives = 118/314 (37%), Gaps = 46/314 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGD 172
            G+ +    D + V   LWD     +   K+      +W R +A   S D           
Sbjct: 1080 GQTVASASDDMTV--WLWDAASGAE---KQVLEGHQNWVRAVA--FSPD----------- 1121

Query: 173  FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                     ++V S     ++ + D      + +  +  + +    FSP+ Q VA A+ D
Sbjct: 1122 --------GQTVASASDDKTIRLWDAASGAEKQVLKAHKKWVRAVAFSPDGQTVASASDD 1173

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                  + L D       + +      + A  FS +G+    S   D  + ++  D  S 
Sbjct: 1174 K----TIRLWDAASGAEKQVLKGHEKSVRAVAFSPDGQTVA-SASFDTTIRLW--DAASG 1226

Query: 293  ATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            A +++      +++A ++SPD   +   SD    + + +  +    +K++ +  E     
Sbjct: 1227 AEKQVLKGHENSVNAVAFSPDGQTVASASD---DKTIRLWDAASGAEKQVLKGHENWVSA 1283

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRK 409
              +SP G  +A   F      I +       E+ +++   +++ A  +SP G+++  +  
Sbjct: 1284 VAFSPDGQTVASASFDTT---IQLWDAASGAEKQVLKGHENSVNAVAFSPDGQTVASASN 1340

Query: 410  K---DGDTGSKLYS 420
                  DT  +L+ 
Sbjct: 1341 DTTISNDTTIRLWD 1354



 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 96/266 (36%), Gaps = 19/266 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++V S     ++ + D      + +    +  +    FSP+ Q VA A+ D      + L
Sbjct: 913  QTVASASDDKTIRLWDAASGAEKQVLKGHENWVNAVAFSPDGQTVASASNDM----TIRL 968

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D       + +      + A  FS +G+    S   D  + ++  D  S A +++    
Sbjct: 969  WDAASGAEKQVLKGHEKSVNAVAFSPDGQTVA-SASNDMTIRLW--DAASGAEKQVLKGH 1025

Query: 302  FINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              +++A ++SPD   +   S       + +  +    +K++ +  E       +SP G  
Sbjct: 1026 EKSVNAVAFSPDGQTVASASF---DTTIRLWDAASGAEKQVLEGHENCVRAVAFSPDGQT 1082

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKL 418
            +A      +   + +       E+ ++E       A  +SP G+++  +     D   +L
Sbjct: 1083 VASAS---DDMTVWLWDAASGAEKQVLEGHQNWVRAVAFSPDGQTVASASD---DKTIRL 1136

Query: 419  YSIDLNGRNETLINTPAYASDPQWVG 444
            +        + L     +     +  
Sbjct: 1137 WDAASGAEKQVLKAHKKWVRAVAFSP 1162



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 89/243 (36%), Gaps = 19/243 (7%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             +    +  +    FSP+ Q VA A+ D      + L D       + +    + + A  
Sbjct: 894  QVLEGHENSVNAVAFSPDGQTVASASDDK----TIRLWDAASGAEKQVLKGHENWVNAVA 949

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
            FS +G+    S   D  + ++  D  S A +++      +++A ++SPD   +   S+  
Sbjct: 950  FSPDGQTVA-SASNDMTIRLW--DAASGAEKQVLKGHEKSVNAVAFSPDGQTVASASN-- 1004

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                + +  +    +K++ +  E S     +SP G  +A   F      I +       E
Sbjct: 1005 -DMTIRLWDAASGAEKQVLKGHEKSVNAVAFSPDGQTVASASFDTT---IRLWDAASGAE 1060

Query: 384  RLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            + ++E       A  +SP G+++  +     D    L+        + L     +     
Sbjct: 1061 KQVLEGHENCVRAVAFSPDGQTVASASD---DMTVWLWDAASGAEKQVLEGHQNWVRAVA 1117

Query: 442  WVG 444
            +  
Sbjct: 1118 FSP 1120



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 83/207 (40%), Gaps = 16/207 (7%)

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            Y       I + Y+M    D   + +    + + A  FS +G+    S   D+ + ++  
Sbjct: 871  YWNQRFNFIEQAYVMHESWDPCIQVLEGHENSVNAVAFSPDGQTVA-SASDDKTIRLW-- 927

Query: 288  DLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D  S A +++       ++A ++SPD   +   S+      + +  +    +K++ +  E
Sbjct: 928  DAASGAEKQVLKGHENWVNAVAFSPDGQTVASASN---DMTIRLWDAASGAEKQVLKGHE 984

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSL 404
             S     +SP G  +A          I +       E+ +++    ++ A  +SP G+++
Sbjct: 985  KSVNAVAFSPDGQTVASASND---MTIRLWDAASGAEKQVLKGHEKSVNAVAFSPDGQTV 1041

Query: 405  IFSRKKDGDTGSKLYSIDLNGRNETLI 431
                    DT  +L+    +G  + ++
Sbjct: 1042 A---SASFDTTIRLWDA-ASGAEKQVL 1064



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 98/302 (32%), Gaps = 52/302 (17%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA-----HTISDDIYQSITG 168
            G+ +    D   +  RLWD     +   +       S R +A      T++   + +   
Sbjct: 1164 GQTVASASDDKTI--RLWDAASGAE--KQVLKGHEKSVRAVAFSPDGQTVASASFDTTIR 1219

Query: 169  E------------KGDFNSRILFVS----ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
                         KG  NS          ++V S     ++ + D      + +    + 
Sbjct: 1220 LWDAASGAEKQVLKGHENSVNAVAFSPDGQTVASASDDKTIRLWDAASGAEKQVLKGHEN 1279

Query: 213  ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             +    FSP+ Q VA A++D      + L D       + +    + + A  FS +G+  
Sbjct: 1280 WVSAVAFSPDGQTVASASFDT----TIQLWDAASGAEKQVLKGHENSVNAVAFSPDGQTV 1335

Query: 273  L-----ISVQKDEAMDIYSVDLQSNATER-------LTNTLFINIS------ASYSPDSS 314
                   ++  D  + ++  D  S A +        +T   F + S       S S +  
Sbjct: 1336 ASASNDTTISNDTTIRLW--DAASGAEKHKHHLDVVVTTLSFPDNSCLNTDRGSLSLNHQ 1393

Query: 315  QIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
               F  +R   E  ++      S Q+ I    +      V S  G+ +     SG    +
Sbjct: 1394 ACNFSIERPENEIFIHKKWVTRSGQRLIWLPPDFRATCTVTS--GNNVVLGHASGGLTFL 1451

Query: 374  GV 375
             +
Sbjct: 1452 WL 1453


>gi|148555860|ref|YP_001263442.1| peptidase S9 prolyl oligopeptidase [Sphingomonas wittichii RW1]
 gi|148501050|gb|ABQ69304.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Sphingomonas wittichii RW1]
          Length = 695

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 91/267 (34%), Gaps = 21/267 (7%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V+S  +K ++ ++D      R L     Q    PR+SP+ +++AY   D +   ++++  
Sbjct: 77  VMSDKVKGAIWLVDVASGAQRPLVADASQ----PRWSPDGKRLAYVAADPKGKPQLFV-R 131

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
              D A  R+           +S +G+    +++                       L +
Sbjct: 132 WLADDATVRVTQLPDGPQGIAWSPDGRSIAYAMRVPGDPVTLGKAPDKPEGADWAKPLEV 191

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                Y  D    V      G + ++V+ ++G   +++S           W+P G  I F
Sbjct: 192 IDKVDYRADGGGYV----EPGYDHIFVVAADGGPPRQLSFGDYQDGGPLSWTPDGRSILF 247

Query: 364 TKFSGEKF-------AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +      +        I  +       R L   +    AP  SP G  + +    D    
Sbjct: 248 SAVRKPDWQHNVFDPEIYALDVATGAIRALTSREGPDVAPVVSPDGSKVAYLGYDDKRLS 307

Query: 416 SK---LYSIDLNGRNETLINTPAYASD 439
            +   LY ++ +G     I T  +   
Sbjct: 308 WQTTLLYVMNRDGSGARAI-TAGFDRS 333



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 47/328 (14%), Positives = 95/328 (28%), Gaps = 78/328 (23%)

Query: 113 TGRVIKEGK---DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
              V ++     D+++    L DV    Q   +   +  +  R                 
Sbjct: 68  VAYVRRQADVMSDKVKGAIWLVDVASGAQ---RPLVADASQPRWSPD------------- 111

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
                 R+ +V+             + D     +  L      I     +SP+ + +AYA
Sbjct: 112 ----GKRLAYVAADPKGKPQLFVRWLADDATVRVTQLPDGPQGI----AWSPDGRSIAYA 163

Query: 230 TYDDEDI--------------------------------------LRVYLMDTRIDRAPK 251
                D                                            +       P+
Sbjct: 164 MRVPGDPVTLGKAPDKPEGADWAKPLEVIDKVDYRADGGGYVEPGYDHIFVVAADGGPPR 223

Query: 252 RIGNFRSMILAP-RFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLFI 303
           ++         P  ++ +G+  L S  +           +IY++D+ + A   LT+    
Sbjct: 224 QLSFGDYQDGGPLSWTPDGRSILFSAVRKPDWQHNVFDPEIYALDVATGAIRALTSREGP 283

Query: 304 NISASYSPDSSQIVFESDREGK-----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +++   SPD S++ +    + +       LYVM  +GS  + I+   + S     W+  G
Sbjct: 284 DVAPVVSPDGSKVAYLGYDDKRLSWQTTLLYVMNRDGSGARAITAGFDRSIDKAEWAADG 343

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             +           I  +  DG    L+
Sbjct: 344 RSLYAQYDDRGINRIARVTLDGKVTELV 371



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 66/189 (34%), Gaps = 21/189 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR----VYLMDTRID 247
            +  +D     IR LT SR+     P  SP+  KVAY  YDD+ +      +Y+M+    
Sbjct: 263 EIYALDVATGAIRALT-SREGPDVAPVVSPDGSKVAYLGYDDKRLSWQTTLLYVMNRDGS 321

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A      F   I    ++++G+             I  V L    TE +      ++  
Sbjct: 322 GARAITAGFDRSIDKAEWAADGRSLYAQYDDRGINRIARVTLDGKVTELVGGMTGTDLDR 381

Query: 308 SYS------PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW------- 354
            YS        +  I F S    +     + ++G   +++++  E               
Sbjct: 382 PYSGGDFSVARTGAIAFTSGSALRPADLSV-ASGGRVRQLTRLNEDFLGAKSLGQVRELA 440

Query: 355 --SPQGDLI 361
             +P G  +
Sbjct: 441 VKAPDGRAV 449



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 6/54 (11%)

Query: 395 PTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           P  SP G+++ + R++           ++ +D+    +  +   A AS P+W  
Sbjct: 59  PQISPDGKTVAYVRRQADVMSDKVKGAIWLVDVASGAQRPLV--ADASQPRWSP 110


>gi|295676345|ref|YP_003604869.1| WD40 repeat, subgroup [Burkholderia sp. CCGE1002]
 gi|295436188|gb|ADG15358.1| WD40 repeat, subgroup [Burkholderia sp. CCGE1002]
          Length = 1445

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 74/426 (17%), Positives = 153/426 (35%), Gaps = 72/426 (16%)

Query: 62   GGKVSEVVS-KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVL--VTGRVIK 118
            G  +++++  ++L  S  F+   +     ++ +       + W++   QV+  +TG    
Sbjct: 940  GQAIAQLIGHRELVSSAAFSPDGR-----RVVSASDDKTARVWDAANGQVITQLTGHQGP 994

Query: 119  ------EGKDRLRVEF------RLWDVKDR---KQIIGKKFFSS-----PASWRKIAHTI 158
                      R  V        R+WD        Q+ G +   S     P   R +  T 
Sbjct: 995  VFSAAFSPDGRRVVTASDDKTARVWDAATGHVITQLTGHQGPVSSAAFTPDGLRVV--TA 1052

Query: 159  SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD--------RDGANIRY----- 205
            SDD     T    D  +  +        G +  ++  +D        RDG    +     
Sbjct: 1053 SDD----KTARVWDAATGQMIAQLIGHEGPVNVAVFSLDGQRVLTASRDGTARAWDAGQG 1108

Query: 206  --LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
              L     + +    F P+ Q+V  A+ D        + D    R    +   R  +   
Sbjct: 1109 ILLLSGHQEPVVSAAFGPDGQRVVTASRDR----TARVWDVATGRQIALLSGHRGWVYFA 1164

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             FS +G+R + +   D+   +++         +L+      +SA++SPDS ++V  +  +
Sbjct: 1165 AFSPDGRRIV-TTSADQTARVWNA-AAGKQIAQLSGHQGTVLSAAFSPDSQRVV-TASAD 1221

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            G  +L+   +       I    +      V+SP G  +    + G      V      ++
Sbjct: 1222 GTARLW--DATTGKLILILGGHQEPVDSVVYSPDGQRVVTASWDGTA---RVWDAATGKQ 1276

Query: 384  RLLVED--SNLQAPTWSPSGRSLIFSRKK------DGDTGSKLYSIDLNGRNETLINTPA 435
             L++      + +  +SP GR ++ +         D  TG ++      G ++  +++ A
Sbjct: 1277 ILVLSGHHGTVFSAAFSPDGRRVVTAAADGTARVWDAATGKQIARF---GGHQRAVSSAA 1333

Query: 436  YASDPQ 441
            ++ D Q
Sbjct: 1334 FSPDGQ 1339



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 123/353 (34%), Gaps = 49/353 (13%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIGKK-------FFSSPASWRKIAHTISD------- 160
            RV+    DR     R+WD    KQI+          F +     R++A   +D       
Sbjct: 838  RVVTASADR---TARVWDASTGKQIVQLGGHQDLVYFAAFNPDGRRVATASADRTARVWD 894

Query: 161  -----DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
                  I Q    +   F++        VVS     +  V D              +++ 
Sbjct: 895  AATGKQIVQLNGHQGPVFSAAFSPDGRRVVSASADRTARVWDAATGQAIAQLIGHRELVS 954

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               FSP+ ++V  A+ D        + D    +   ++   +  + +  FS +G+R +++
Sbjct: 955  SAAFSPDGRRVVSASDDK----TARVWDAANGQVITQLTGHQGPVFSAAFSPDGRR-VVT 1009

Query: 276  VQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               D+   ++  D  +     +LT       SA+++PD  ++V  SD    +   V  + 
Sbjct: 1010 ASDDKTARVW--DAATGHVITQLTGHQGPVSSAAFTPDGLRVVTASD---DKTARVWDAA 1064

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                       E      V+S  G  +      G   A      D  Q  LL+       
Sbjct: 1065 TGQMIAQLIGHEGPVNVAVFSLDGQRVLTASRDGTARAW-----DAGQGILLLSGHQEPV 1119

Query: 395  PT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
             +  + P G+ ++ + +   D  ++++ +   GR   L++         WV F
Sbjct: 1120 VSAAFGPDGQRVVTASR---DRTARVWDV-ATGRQIALLSGHRG-----WVYF 1163



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 89/266 (33%), Gaps = 19/266 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + VV+     +  V D        L       ++   FSP+ +++   + D        +
Sbjct: 1129 QRVVTASRDRTARVWDVATGRQIALLSGHRGWVYFAAFSPDGRRIVTTSADQ----TARV 1184

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             +    +   ++   +  +L+  FS + +R +++   D    ++  D  +      L   
Sbjct: 1185 WNAAAGKQIAQLSGHQGTVLSAAFSPDSQR-VVTASADGTARLW--DATTGKLILILGGH 1241

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S  YSPD  ++V  +  +G  +++   +    Q  +      + F   +SP G  
Sbjct: 1242 QEPVDSVVYSPDGQRVV-TASWDGTARVW--DAATGKQILVLSGHHGTVFSAAFSPDGRR 1298

Query: 361  IAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +      G      V      ++  R       + +  +SP G+ ++ +     D  +++
Sbjct: 1299 VVTAAADGTA---RVWDAATGKQIARFGGHQRAVSSAAFSPDGQRVVTAS---ADQTARV 1352

Query: 419  YSIDLNGRNETLINTPAYASDPQWVG 444
            +          L       S   +  
Sbjct: 1353 WDAATGRVIAQLAGHRGPVSSAAFSP 1378



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 83/266 (31%), Gaps = 19/266 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + VV+     +  V D               +++   F P+ ++V  A+ D        +
Sbjct: 795  KRVVTASWDGTARVWDAATGKQIVQLSGHQGLVYSAAFDPDGRRVVTASADR----TARV 850

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D    +   ++G  + ++    F+ +G+R   +   D    ++          +L    
Sbjct: 851  WDASTGKQIVQLGGHQDLVYFAAFNPDGRRVA-TASADRTARVWDA-ATGKQIVQLNGHQ 908

Query: 302  FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                SA++SPD  ++V  S DR  +    V  +                    +SP G  
Sbjct: 909  GPVFSAAFSPDGRRVVSASADRTAR----VWDAATGQAIAQLIGHRELVSSAAFSPDGRR 964

Query: 361  IAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +             V      Q   +L      + +  +SP GR ++ +     D  +++
Sbjct: 965  VVSASDDKTA---RVWDAANGQVITQLTGHQGPVFSAAFSPDGRRVVTASD---DKTARV 1018

Query: 419  YSIDLNGRNETLINTPAYASDPQWVG 444
            +          L       S   +  
Sbjct: 1019 WDAATGHVITQLTGHQGPVSSAAFTP 1044



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 93/251 (37%), Gaps = 21/251 (8%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILRVYLMDTR 245
           G +   L +M    A+++    S  +   +   FSP+ ++V  A++D        + D  
Sbjct: 757 GSVDAELELMRGAQASMQIALLSGHRDAVDSAVFSPDGKRVVTASWDG----TARVWDAA 812

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +   ++   + ++ +  F  +G+R +++   D    ++          +L     +  
Sbjct: 813 TGKQIVQLSGHQGLVYSAAFDPDGRR-VVTASADRTARVWDAS-TGKQIVQLGGHQDLVY 870

Query: 306 SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            A+++PD  ++   S DR  +    V  +    Q       +   F   +SP G  +   
Sbjct: 871 FAAFNPDGRRVATASADRTAR----VWDAATGKQIVQLNGHQGPVFSAAFSPDGRRVVSA 926

Query: 365 KFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                     V      Q   +L+     + +  +SP GR ++ +     D  ++++   
Sbjct: 927 SADRTA---RVWDAATGQAIAQLIGHRELVSSAAFSPDGRRVVSASD---DKTARVWDA- 979

Query: 423 LNGRNETLINT 433
            NG+  T +  
Sbjct: 980 ANGQVITQLTG 990



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 97/295 (32%), Gaps = 40/295 (13%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            R+WDV   +QI                H     +Y +     G            +V+  
Sbjct: 1141 RVWDVATGRQIALLS-----------GHR--GWVYFAAFSPDG----------RRIVTTS 1177

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               +  V +                +    FSP+ Q+V  A+ D        L D    +
Sbjct: 1178 ADQTARVWNAAAGKQIAQLSGHQGTVLSAAFSPDSQRVVTASADG----TARLWDATTGK 1233

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                +G  +  + +  +S +G+R +++   D    ++           L+       SA+
Sbjct: 1234 LILILGGHQEPVDSVVYSPDGQR-VVTASWDGTARVWDA-ATGKQILVLSGHHGTVFSAA 1291

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPD  ++V  +  +G  +++   +    Q       + +     +SP G  +       
Sbjct: 1292 FSPDGRRVV-TAAADGTARVW--DAATGKQIARFGGHQRAVSSAAFSPDGQRVVTASADQ 1348

Query: 369  EKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                  V      +   +L      + +  +SP G+ ++ +     D  ++++ I
Sbjct: 1349 TA---RVWDAATGRVIAQLAGHRGPVSSAAFSPDGQRVVTAS---ADQTARVWPI 1397



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 74/226 (32%), Gaps = 47/226 (20%)

Query: 76   SDVFNLISQDSFKQKITNPDSIPRFQDWNSL-GAQVLVTG-------RVIKEGKDRLRVE 127
            S  F+  S     Q++    +    + W++  G  +L+ G        V+     +  V 
Sbjct: 1205 SAAFSPDS-----QRVVTASADGTARLWDATTGKLILILGGHQEPVDSVVYSPDGQRVVT 1259

Query: 128  F------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                   R+WD    KQI+               H     ++ +     G          
Sbjct: 1260 ASWDGTARVWDAATGKQILVLS-----------GHH--GTVFSAAFSPDG---------- 1296

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              VV+     +  V D              + +    FSP+ Q+V  A+ D        +
Sbjct: 1297 RRVVTAAADGTARVWDAATGKQIARFGGHQRAVSSAAFSPDGQRVVTASADQ----TARV 1352

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             D    R   ++   R  + +  FS +G+R +++   D+   ++ +
Sbjct: 1353 WDAATGRVIAQLAGHRGPVSSAAFSPDGQR-VVTASADQTARVWPI 1397


>gi|262196482|ref|YP_003267691.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262079829|gb|ACY15798.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1547

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 104/279 (37%), Gaps = 27/279 (9%)

Query: 156  HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
            H   D +  +     G            +VS     ++ V   DG+N   +    D ++ 
Sbjct: 1207 HGHDDAVMSASFSPDG----------TRLVSASADKTVRVWGTDGSNEPLILRGHDSVVI 1256

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               FSP+   +  A+ D      V +        P  +      +   RFS +G   + +
Sbjct: 1257 SASFSPDGAHLVTASADK----TVRVWRADGAGEPLTLRGHDEAVWTARFSPDGTHLV-T 1311

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               D+ + ++  D  +     L     +  SA YS D +Q+V  S     + + V Q++G
Sbjct: 1312 ASADQTVRVWKAD-GTGEPLVLRGHDNVVWSADYSRDGTQLVSAS---WDKTVRVWQADG 1367

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQ 393
            + +  + +  + +     +SP G  I    +      + V K DG+   L++      + 
Sbjct: 1368 TGEPLVLRGHDEAVMSASFSPDGTNIVSASWDKT---VRVWKADGAGVPLILRGHGEAVL 1424

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            + ++S  GR ++ + +   D   +++  D  G    L  
Sbjct: 1425 SASFSQDGRYIVSTSR---DKTIRIWRADGTGEPVLLRP 1460



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 55/314 (17%), Positives = 106/314 (33%), Gaps = 36/314 (11%)

Query: 108  AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
             + ++T R   EG         L      K +   +   +        H   D +  +  
Sbjct: 916  IEAVMTARFSPEGT-------HLVSASADKTVRVWRADGTGQPVVLRGHE--DAVMSASF 966

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
               G            +VS  +  ++ V   DG     +    +  +    FSP+  ++ 
Sbjct: 967  SPDGAH----------IVSASVDKTVRVWRADGTGQPIVLRGHEASVMSASFSPDGARIV 1016

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A+ D      V +  T        +      + +  FS +G     S   DE + ++  
Sbjct: 1017 SASTDK----TVRVWRTDGTGQALVLHGHDGAVTSASFSPDGAHIA-SASSDETIRVWRA 1071

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            D        L+       S S+ PD SQIV  S     + + V +++G+   R+ +  + 
Sbjct: 1072 DGA-GQPVILSGHGETVWSVSFRPDGSQIVSASH---DKTVRVWRADGTGNSRVLRGHDD 1127

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
                  +SP G  I  T        + V   DG+ E L++   +    + ++SP G  + 
Sbjct: 1128 FVMSASFSPDGTQIVSTSSDKT---VRVWPADGAGEPLILRGHDDVVWSASFSPEGTHI- 1183

Query: 406  FSRKKDGDTGSKLY 419
                   D   +++
Sbjct: 1184 --TSASSDKTVRIW 1195



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 98/251 (39%), Gaps = 19/251 (7%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             +VS     ++ V   DG     +    D  +    FSP+   +A A+ D+     + + 
Sbjct: 1014 RIVSASTDKTVRVWRTDGTGQALVLHGHDGAVTSASFSPDGAHIASASSDE----TIRVW 1069

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                   P  +      + +  F  +G + + S   D+ + ++  D  +  +  L     
Sbjct: 1070 RADGAGQPVILSGHGETVWSVSFRPDGSQIV-SASHDKTVRVWRAD-GTGNSRVLRGHDD 1127

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              +SAS+SPD +QIV  S     + + V  ++G+ +  I +  +   +   +SP+G  I 
Sbjct: 1128 FVMSASFSPDGTQIVSTSS---DKTVRVWPADGAGEPLILRGHDDVVWSASFSPEGTHIT 1184

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                      + +     S E L +   +    + ++SP G  L+       D   +++ 
Sbjct: 1185 SASSDKT---VRIWGPGDSDEPLALHGHDDAVMSASFSPDGTRLV---SASADKTVRVW- 1237

Query: 421  IDLNGRNETLI 431
               +G NE LI
Sbjct: 1238 -GTDGSNEPLI 1247



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 91/229 (39%), Gaps = 14/229 (6%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            V+     ++ V   DGA         D+ ++  RFSP+   +  A+ D      V +   
Sbjct: 1268 VTASADKTVRVWRADGAGEPLTLRGHDEAVWTARFSPDGTHLVTASADQ----TVRVWKA 1323

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 P  +    +++ +  +S +G + + S   D+ + ++  D  +     L       
Sbjct: 1324 DGTGEPLVLRGHDNVVWSADYSRDGTQLV-SASWDKTVRVWQAD-GTGEPLVLRGHDEAV 1381

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +SAS+SPD + IV  S     + + V +++G+    I +    +     +S  G  I  T
Sbjct: 1382 MSASFSPDGTNIVSAS---WDKTVRVWKADGAGVPLILRGHGEAVLSASFSQDGRYIVST 1438

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKD 411
                    I + + DG+ E +L+        T  +SP G+ ++ +    
Sbjct: 1439 SRDKT---IRIWRADGTGEPVLLRPPEQWDNTVNFSPDGQRIVSASNDG 1484



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 85/239 (35%), Gaps = 13/239 (5%)

Query: 159  SDDIYQSIT---GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
            +D   + +T    ++  + +R       +V+     ++ V   DG     +    D +++
Sbjct: 1281 ADGAGEPLTLRGHDEAVWTARFSPDGTHLVTASADQTVRVWKADGTGEPLVLRGHDNVVW 1340

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               +S +  ++  A++D      V +        P  +      +++  FS +G   + S
Sbjct: 1341 SADYSRDGTQLVSASWDK----TVRVWQADGTGEPLVLRGHDEAVMSASFSPDGTNIV-S 1395

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               D+ + ++  D          +   + +SAS+S D   IV  S     + + + +++G
Sbjct: 1396 ASWDKTVRVWKADGAGVPLILRGHGEAV-LSASFSQDGRYIVSTSR---DKTIRIWRADG 1451

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-VMKKDGSQERLLVEDSNLQ 393
            + +  + +  E       +SP G  I      G       +        RL    S   
Sbjct: 1452 TGEPVLLRPPEQWDNTVNFSPDGQRIVSASNDGTVHVWRDLAPVTLDDPRLWTRTSYCM 1510



 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 76/187 (40%), Gaps = 9/187 (4%)

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
             + D AP    +    ++  RFS  G   + S   D+ + ++  D  +     L      
Sbjct: 903  LQSDIAPVVFTDHIEAVMTARFSPEGTHLV-SASADKTVRVWRAD-GTGQPVVLRGHEDA 960

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +SAS+SPD + IV  S     + + V +++G+ Q  + +  EAS     +SP G  I  
Sbjct: 961  VMSASFSPDGAHIVSASV---DKTVRVWRADGTGQPIVLRGHEASVMSASFSPDGARIV- 1016

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +  + +   +      G    L   D  + + ++SP G  +  +     D   +++  D 
Sbjct: 1017 SASTDKTVRVWRTDGTGQALVLHGHDGAVTSASFSPDGAHIASASS---DETIRVWRADG 1073

Query: 424  NGRNETL 430
             G+   L
Sbjct: 1074 AGQPVIL 1080


>gi|331695060|ref|YP_004331299.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Pseudonocardia dioxanivorans CB1190]
 gi|326949749|gb|AEA23446.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Pseudonocardia dioxanivorans CB1190]
          Length = 660

 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 99/286 (34%), Gaps = 32/286 (11%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
            +     +     ++ + +   DG++      + +    +PR+SP+ +++A+ +    D 
Sbjct: 26  FVVTHVDMAENTYRSGVWLAAADGSSPPQPFSAGEHGDGQPRWSPDGRRLAFTSRRGTDE 85

Query: 237 -LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +++         + I      I  P +S +G R   +  ++        + ++    
Sbjct: 86  HPTLHVAPVDGPGEVRTICERPEAIEDPAWSPDGTRIAFT-SRERTARFDEPEEKARPPR 144

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           R+   +       +  D  + VF           V+  +GS    +      ++  P WS
Sbjct: 145 RIDRLVTRLDGEGWIVDRPRSVF-----------VVAVDGSGPPTLVAGGPYNHGAPSWS 193

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD--------GSQERLLV-EDSNLQAPTWSPSGRSLIF 406
           P    IA T      + +  +  D        GS+ R L       + P+WSP G  +  
Sbjct: 194 PDSATIAVTADRTPDWDLTPILADVLLVDPTGGSEPRALTRRTFAHRLPSWSPDGTRIAV 253

Query: 407 SRKKDG--DTGSKLYSIDLNGRNETLINTPAY--------ASDPQW 442
             +      + +++  +D+    ET++             A  P W
Sbjct: 254 LAEDSRIIHSHTQVAVVDVASGEETVLTAALDRQCAPMPGARQPVW 299



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 50/236 (21%)

Query: 259 MILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSP 311
            I  PR S +G++    V      +      ++      ++  +  +     +    +SP
Sbjct: 11  QISDPRVSPDGRQVAFVVTHVDMAENTYRSGVWLAAADGSSPPQPFSAGEHGDGQPRWSP 70

Query: 312 DSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--- 366
           D  ++ F S R       L+V   +G  + R   ++  +  DP WSP G  IAFT     
Sbjct: 71  DGRRLAFTSRRGTDEHPTLHVAPVDGPGEVRTICERPEAIEDPAWSPDGTRIAFTSRERT 130

Query: 367 -----------------------SGEKF------AIGVMKKDGSQERLLVEDS--NLQAP 395
                                   GE +      ++ V+  DGS    LV     N  AP
Sbjct: 131 ARFDEPEEKARPPRRIDRLVTRLDGEGWIVDRPRSVFVVAVDGSGPPTLVAGGPYNHGAP 190

Query: 396 TWSPSGRSLIFSRKKDGDTG-----SKLYSIDLNGRNETLINTPAYASD--PQWVG 444
           +WSP   ++  +  +  D       + +  +D  G +E    T    +   P W  
Sbjct: 191 SWSPDSATIAVTADRTPDWDLTPILADVLLVDPTGGSEPRALTRRTFAHRLPSWSP 246



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 67/223 (30%), Gaps = 21/223 (9%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------ILRVYLM 242
              S+ V+  DG+    L          P +SP+   +A       D      +  V L+
Sbjct: 162 RPRSVFVVAVDGSGPPTLVAGGPYNHGAPSWSPDSATIAVTADRTPDWDLTPILADVLLV 221

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----AMDIYSVDLQSNATERLT 298
           D      P+ +         P +S +G R  +  +          +  VD+ S     LT
Sbjct: 222 DPTGGSEPRALTRRTFAHRLPSWSPDGTRIAVLAEDSRIIHSHTQVAVVDVASGEETVLT 281

Query: 299 NTLFIN-------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
             L              +  D   +V   +  G   +  + + G D    +      +  
Sbjct: 282 AALDRQCAPMPGARQPVW--DGDDLVLSWEDAGNVHVGRVPATGGDVA--TVVGGELWVT 337

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                 G L      +     + V+ +DG++ RL        A
Sbjct: 338 GHDLAGGTLAFTAATATALPELFVLDRDGTRRRLTTAGDAFHA 380


>gi|229526314|ref|ZP_04415718.1| protease-related protein [Vibrio cholerae bv. albensis VL426]
 gi|229336472|gb|EEO01490.1| protease-related protein [Vibrio cholerae bv. albensis VL426]
          Length = 1084

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 43/254 (16%)

Query: 211 DQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           D     P +      SP+ QK+A+             +          +         P 
Sbjct: 32  DSTQARPTWLRDIALSPDGQKIAFTYAGQ------IWLVPAQGGDAVALTESGVYSETPI 85

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S + +    +  +    D++ + +Q   + RLT     +I  ++S D  Q+ F S R G
Sbjct: 86  WSPDSQSIAFTADRYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLG 145

Query: 325 KE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            +             QLY + + G  ++R+      +  D   SP    I +T       
Sbjct: 146 DDKANANVKQGSFMAQLYSVPAAGGREQRVL---PIAISDLAISPSHSDILYTNQPSDEQ 202

Query: 367 -------SGEKFAIG-VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  S     I       G   ++       + P WS  G S+ +  ++ G     +
Sbjct: 203 PWRKGAVSDATRDIWQWSPLTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSF--NV 260

Query: 419 YSIDLNGRNETLIN 432
           +    +G     I 
Sbjct: 261 WQQRFDGSEPVQIT 274



 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 30/205 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G++   +     A  I+ V  Q      LT +   + +  +SPDS  I F +DR 
Sbjct: 45  ALSPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRY 100

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------ 371
           G   ++++   G + +R++    A      +S  G  + F+                   
Sbjct: 101 GLGDVFILSIQGGESRRLTYHG-AKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFM 159

Query: 372 -AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYS 420
             +  +   G +E+ ++    +     SPS   ++++ +             D    ++ 
Sbjct: 160 AQLYSVPAAGGREQRVL-PIAISDLAISPSHSDILYTNQPSDEQPWRKGAVSDATRDIWQ 218

Query: 421 ID-LNGRNETLINTPAYASDPQWVG 444
              L G++  +        +P W  
Sbjct: 219 WSPLTGKHTQITTFRGEDRNPVWSA 243



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 98/331 (29%), Gaps = 89/331 (26%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRID 247
           G + R        I +   FS + Q++ +++    D            + ++Y +     
Sbjct: 113 GESRRLTYHGAKDIPY--AFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAGG 170

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIYSVDLQSNATE 295
           R  + +      I     S +    L + Q             D   DI+     +    
Sbjct: 171 REQRVL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGAVSDATRDIWQWSPLTGKHT 227

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------------ 343
           ++T     + +  +S D S + + S++ G   ++  + +GS+  +I+             
Sbjct: 228 QITTFRGEDRNPVWSADGSSMYYLSEQAGSFNVWQQRFDGSEPVQITDHQKLPVRFLSAS 287

Query: 344 ---DKEASYFDPVW--------------------SPQGDLIAFTKFSGEKF--------- 371
              D    +   +W                     P G           +          
Sbjct: 288 LQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEATEMVVAPNAAEV 347

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT---------G 415
                  + V+       + + +    +   ++S  G  LI++ +++G           G
Sbjct: 348 AIVARGDVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSYVNDG 407

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            K +S  L+   E ++ T      P +   +
Sbjct: 408 GKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 341 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDVSFSSDGYRLIYASERE 394

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   +                  LT    + I   YSP+  +IV+   RE +  L
Sbjct: 395 GSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDV-IQPLYSPNLKRIVY---RENRNTL 450

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + I     +     I ++K DGS+ 
Sbjct: 451 KVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEA 510

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNG 425
            + L +    + AP +S  G+ + +     G  D    +   D+ G
Sbjct: 511 PINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDMVVQYDVYG 556



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 99/286 (34%), Gaps = 41/286 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------KVAYATYDDEDILRVYLMDTR 245
           +     DG+    +T  +   +     S           ++       +   +V +   R
Sbjct: 260 VWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRR 319

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +   NF         + N     I  + D    +Y V L S  T+R+T+T    
Sbjct: 320 SAMPDGRHNVNFNLEATEMVVAPNAAEVAIVARGD----VYVVSLLSGLTQRITDTPEAE 375

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPV 353
              S+S D  ++++ S+REG   LY    N             ++  ++ +++     P+
Sbjct: 376 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQD--VIQPL 433

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIF 406
           +SP    I + +       + V   +  +   L++   L +         WSP    ++ 
Sbjct: 434 YSPNLKRIVYRENRNT---LKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVT 490

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGFM 446
             +   +   +L   D +     L  +      P +++D QWV ++
Sbjct: 491 RDRAMSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWL 536



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 19/174 (10%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+  +   ++ + Y+ D        +D   + +      ++ P +S N 
Sbjct: 379 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR +    ++    +   D++ + T  L +   +      ++S  +SPDS  IV   DR 
Sbjct: 439 KRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV-TRDRA 494

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                + +++ +GS+          S F P +S  G  + +   +     I  M
Sbjct: 495 MSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDM 548


>gi|116624825|ref|YP_826981.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227987|gb|ABJ86696.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 886

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 7/196 (3%)

Query: 253 IGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +G   +    P  S +G RA +  +    + DI+ +D+      R T+    +   ++SP
Sbjct: 605 VGPPGNYGSGPTLSPDGTRAAVDKIDAAGSRDIWVLDIARGVATRSTSDAAQDHGPAWSP 664

Query: 312 DSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSG 368
           D +++VF S R   G + +Y  +S+G+ ++       +  F   WSP    + +      
Sbjct: 665 DGTRLVFSSARGAAGTDGIYQRESSGTGKEEPLLQGHSLIFPNGWSPDVRYLLYSVTGQK 724

Query: 369 EKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               + ++   G+     L    N +   +SP GR + ++  + G     + S    G  
Sbjct: 725 TGSDLLLLPAAGTPPVPYLEGPYNEKQGQFSPDGRWIAYASDETGSFEVYVQSFPA-GAG 783

Query: 428 ETLINTPAYASDPQWV 443
           + L++T    S P+W 
Sbjct: 784 KFLVSTAG-GSQPRWS 798



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 64/193 (33%), Gaps = 4/193 (2%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P  SP+  + A    D      ++++D     A  R  +  +    P +S +G R + S 
Sbjct: 615 PTLSPDGTRAAVDKIDAAGSRDIWVLDIARGVAT-RSTSDAAQDHGPAWSPDGTRLVFSS 673

Query: 277 QKD--EAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +       IY  +       E L     +     +SPD   +++    +      ++  
Sbjct: 674 ARGAAGTDGIYQRESSGTGKEEPLLQGHSLIFPNGWSPDVRYLLYSVTGQKTGSDLLLLP 733

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                     +   +     +SP G  IA+       F + V        + LV  +   
Sbjct: 734 AAGTPPVPYLEGPYNEKQGQFSPDGRWIAYASDETGSFEVYVQSFPAGAGKFLVSTAGGS 793

Query: 394 APTWSPSGRSLIF 406
            P WS  G+ + +
Sbjct: 794 QPRWSRDGKEIFY 806



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 73/237 (30%), Gaps = 17/237 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMDT 244
                  + V+D     +   + S       P +SP+  ++ +++         +Y  ++
Sbjct: 630 DAAGSRDIWVLDI-ARGVATRSTSDAAQDHGPAWSPDGTRLVFSSARGAAGTDGIYQRES 688

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFI 303
                 + +    S+I    +S + +  L SV  +    D+  +              + 
Sbjct: 689 SGTGKEEPLLQGHSLIFPNGWSPDVRYLLYSVTGQKTGSDLLLLPAAGTPPVPYLEGPYN 748

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                +SPD   I + SD  G  ++YV        K +      S   P WS  G  I +
Sbjct: 749 EKQGQFSPDGRWIAYASDETGSFEVYVQSFPAGAGKFLVSTAGGS--QPRWSRDGKEIFY 806

Query: 364 TKFSGEKFAIGVMKK----DGSQERLLVEDS--------NLQAPTWSPSGRSLIFSR 408
              +    A+ V            + L +          +      S  G+  + S 
Sbjct: 807 INANARLTAVAVKTAPRFETTGTPQPLFDPQIPPGALADSFFHYDVSADGKRFLVSS 863



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 16/174 (9%)

Query: 264 RFSSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             S +G++        D    ++   L S A   L  T    +   +SPDS  I F    
Sbjct: 343 ALSPDGRQLAFIASGADGRPMLWVRPLDSIAARALPGTEGAALLPFWSPDSRVIGFMVQ- 401

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               ++  +++ G   + +  +         WS  G ++ F    G  F +    + G  
Sbjct: 402 ---GKVKSIEAAGGTPQTL-CEVPGQVIGGSWSRDG-VVLFGTPDGGLFRV---SQAGGA 453

Query: 383 ERLLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
              L    +         P + P GR  ++  +        +Y   L+   +  
Sbjct: 454 PTRLTASDDSHGEFGHLRPWFLPDGRHFLYFSRSIKREVVGIYLATLDDNGKQR 507



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 86/307 (28%), Gaps = 36/307 (11%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ----ILFEPRF 219
           Q++    G            V+ G     L  + + G     LT S D         P F
Sbjct: 415 QTLCEVPGQVIGGSWSRDGVVLFGTPDGGLFRVSQAGGAPTRLTASDDSHGEFGHLRPWF 474

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN-----GKRALI 274
            P+ +   Y +   +  +    + T  D   +R     +   A           G    +
Sbjct: 475 LPDGRHFLYFSRSIKREVVGIYLATLDDNGKQRKRLVATDQGAAYAPPAAGMQYGHLLFL 534

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FESDREGKEQLYVMQ 332
              ++  +    +D +S            +         S++   F S        Y   
Sbjct: 535 ---REGTLMALPLDARS-------FEPAGDPFPVAEHVGSRLAMGFFSVSANGVLAYRNG 584

Query: 333 SNGSDQKRISQDKEASY-----------FDPVWSPQGDLIAFTKFSG-EKFAIGVMKKD- 379
           +  S  + +  D++                P  SP G   A  K        I V+    
Sbjct: 585 AAASGSQLMWFDRQGIALGAVGPPGNYGSGPTLSPDGTRAAVDKIDAAGSRDIWVLDIAR 644

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS--IDLNGRNETLINTPAYA 437
           G   R   + +    P WSP G  L+FS  +       +Y       G+ E L+   +  
Sbjct: 645 GVATRSTSDAAQDHGPAWSPDGTRLVFSSARGAAGTDGIYQRESSGTGKEEPLLQGHSLI 704

Query: 438 SDPQWVG 444
               W  
Sbjct: 705 FPNGWSP 711



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 13/136 (9%)

Query: 304 NISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +   + SPD  Q+ F  S  +G+  L+V   +    + +    E +   P WSP   +I 
Sbjct: 339 DTGLALSPDGRQLAFIASGADGRPMLWVRPLDSIAARAL-PGTEGAALLPFWSPDSRVIG 397

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           F         +  ++  G   + L E    +   +WS  G  ++F     G     L+ +
Sbjct: 398 FMVQG----KVKSIEAAGGTPQTLCEVPGQVIGGSWSRDG-VVLF-----GTPDGGLFRV 447

Query: 422 DLNGRNETLINTPAYA 437
              G   T +     +
Sbjct: 448 SQAGGAPTRLTASDDS 463



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 62/180 (34%), Gaps = 17/180 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A+     +    +++       A    G      L P +S + +     VQ
Sbjct: 343 ALSPDGRQLAFIASGADGRPMLWVRPLDSIAARALPGT-EGAALLPFWSPDSRVIGFMVQ 401

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 + S++      + L       I  S+S D   +V     +G   L+ +   G  
Sbjct: 402 G----KVKSIEAAGGTPQTLCEVPGQVIGGSWSRDG--VVLFGTPDGG--LFRVSQAGGA 453

Query: 338 QKRIS----QDKEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQERLLVED 389
             R++       E  +  P + P G    +   S ++      +  +  +G Q + LV  
Sbjct: 454 PTRLTASDDSHGEFGHLRPWFLPDGRHFLYFSRSIKREVVGIYLATLDDNGKQRKRLVAT 513



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 55/158 (34%), Gaps = 20/158 (12%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V   D    R L P  +     P +SP+ + + +        +            P+ 
Sbjct: 364 LWVRPLDSIAARAL-PGTEGAALLPFWSPDSRVIGFMVQGKVKSIEA------AGGTPQT 416

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-----NTLFINISA 307
           +      ++   +S +G   ++    D    ++ V     A  RLT     +  F ++  
Sbjct: 417 LCEVPGQVIGGSWSRDG--VVLFGTPDGG--LFRVSQAGGAPTRLTASDDSHGEFGHLRP 472

Query: 308 SYSPDSSQIVFESDREGKE----QLYVMQSNGSDQKRI 341
            + PD    ++ S    +E     L  +  NG  +KR+
Sbjct: 473 WFLPDGRHFLYFSRSIKREVVGIYLATLDDNGKQRKRL 510


>gi|121729769|ref|ZP_01682207.1| tricorn protease [Vibrio cholerae V52]
 gi|147671883|ref|YP_001214930.1| tricorn protease [Vibrio cholerae O395]
 gi|153816717|ref|ZP_01969384.1| tricorn protease [Vibrio cholerae NCTC 8457]
 gi|227811674|ref|YP_002811684.1| putative tricorn protease [Vibrio cholerae M66-2]
 gi|229506776|ref|ZP_04396285.1| protease-related protein [Vibrio cholerae BX 330286]
 gi|229510429|ref|ZP_04399909.1| protease-related protein [Vibrio cholerae B33]
 gi|229517440|ref|ZP_04406885.1| protease-related protein [Vibrio cholerae RC9]
 gi|229605250|ref|YP_002875954.1| protease-related protein [Vibrio cholerae MJ-1236]
 gi|254850313|ref|ZP_05239663.1| tricorn protease [Vibrio cholerae MO10]
 gi|298499912|ref|ZP_07009718.1| tricorn protease [Vibrio cholerae MAK 757]
 gi|121628491|gb|EAX60978.1| tricorn protease [Vibrio cholerae V52]
 gi|126512736|gb|EAZ75330.1| tricorn protease [Vibrio cholerae NCTC 8457]
 gi|146314266|gb|ABQ18806.1| tricorn protease [Vibrio cholerae O395]
 gi|227010816|gb|ACP07027.1| putative tricorn protease [Vibrio cholerae M66-2]
 gi|227014678|gb|ACP10887.1| putative tricorn protease [Vibrio cholerae O395]
 gi|229345476|gb|EEO10449.1| protease-related protein [Vibrio cholerae RC9]
 gi|229352874|gb|EEO17814.1| protease-related protein [Vibrio cholerae B33]
 gi|229357127|gb|EEO22045.1| protease-related protein [Vibrio cholerae BX 330286]
 gi|229371736|gb|ACQ62158.1| protease-related protein [Vibrio cholerae MJ-1236]
 gi|254846018|gb|EET24432.1| tricorn protease [Vibrio cholerae MO10]
 gi|297541893|gb|EFH77944.1| tricorn protease [Vibrio cholerae MAK 757]
          Length = 1084

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 43/254 (16%)

Query: 211 DQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           D     P +      SP+ QK+A+             +          +         P 
Sbjct: 32  DSTQARPTWLRDIALSPDGQKIAFTYAGQ------IWLVPAQGGDAVALTESGVYSETPI 85

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S + +    +  +    D++ + +Q   + RLT     +I  ++S D  Q+ F S R G
Sbjct: 86  WSPDSQSIAFTADRYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLG 145

Query: 325 KE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            +             QLY + + G  ++R+      +  D   SP    I +T       
Sbjct: 146 DDKANANVKQGSFMAQLYSVPAAGGREQRVL---PIAISDLAISPSHSDILYTNQPSDEQ 202

Query: 367 -------SGEKFAIG-VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  S     I       G   ++       + P WS  G S+ +  ++ G     +
Sbjct: 203 PWRKGALSDATRDIWQWSPLTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSF--NV 260

Query: 419 YSIDLNGRNETLIN 432
           +    +G     I 
Sbjct: 261 WQQRFDGSEPVQIT 274



 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 30/205 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G++   +     A  I+ V  Q      LT +   + +  +SPDS  I F +DR 
Sbjct: 45  ALSPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRY 100

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------ 371
           G   ++++   G + +R++    A      +S  G  + F+                   
Sbjct: 101 GLGDVFILSIQGGESRRLTYHG-AKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFM 159

Query: 372 -AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYS 420
             +  +   G +E+ ++    +     SPS   ++++ +             D    ++ 
Sbjct: 160 AQLYSVPAAGGREQRVL-PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQ 218

Query: 421 ID-LNGRNETLINTPAYASDPQWVG 444
              L G++  +        +P W  
Sbjct: 219 WSPLTGKHTQITTFRGEDRNPVWSA 243



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 98/331 (29%), Gaps = 89/331 (26%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRID 247
           G + R        I +   FS + Q++ +++    D            + ++Y +     
Sbjct: 113 GESRRLTYHGAKDIPY--AFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAGG 170

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIYSVDLQSNATE 295
           R  + +      I     S +    L + Q             D   DI+     +    
Sbjct: 171 REQRVL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQWSPLTGKHT 227

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------------ 343
           ++T     + +  +S D S + + S++ G   ++  + +GS+  +I+             
Sbjct: 228 QITTFRGEDRNPVWSADGSSMYYLSEQAGSFNVWQQRFDGSEPVQITDHQKLPVRFLSAS 287

Query: 344 ---DKEASYFDPVW--------------------SPQGDLIAFTKFSGEKF--------- 371
              D    +   +W                     P G           +          
Sbjct: 288 LQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEATEMVVAPNAAEV 347

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT---------G 415
                  + V+       + + +    +   ++S  G  LI++ +++G           G
Sbjct: 348 AIVARGDVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSYVNDG 407

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            K +S  L+   E ++ T      P +   +
Sbjct: 408 GKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 341 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDVSFSSDGYRLIYASERE 394

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   +                  LT    + I   YSP+  +IV+   RE +  L
Sbjct: 395 GSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDV-IQPLYSPNLKRIVY---RENRNTL 450

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + I     +     I ++K DGS+ 
Sbjct: 451 KVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEA 510

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNG 425
            + L +    + AP +S  G+ + +     G  D    +   D+ G
Sbjct: 511 PINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDMVVQYDVYG 556



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 99/286 (34%), Gaps = 41/286 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------KVAYATYDDEDILRVYLMDTR 245
           +     DG+    +T  +   +     S           ++       +   +V +   R
Sbjct: 260 VWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRR 319

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +   NF         + N     I  + D    +Y V L S  T+R+T+T    
Sbjct: 320 SAMPDGRHNVNFNLEATEMVVAPNAAEVAIVARGD----VYVVSLLSGLTQRITDTPEAE 375

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPV 353
              S+S D  ++++ S+REG   LY    N             ++  ++ +++     P+
Sbjct: 376 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQD--VIQPL 433

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIF 406
           +SP    I + +       + V   +  +   L++   L +         WSP    ++ 
Sbjct: 434 YSPNLKRIVYRENRNT---LKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVT 490

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGFM 446
             +   +   +L   D +     L  +      P +++D QWV ++
Sbjct: 491 RDRAMSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWL 536



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 19/174 (10%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+  +   ++ + Y+ D        +D   + +      ++ P +S N 
Sbjct: 379 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR +    ++    +   D++ + T  L +   +      ++S  +SPDS  IV   DR 
Sbjct: 439 KRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV-TRDRA 494

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                + +++ +GS+          S F P +S  G  + +   +     I  M
Sbjct: 495 MSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDM 548


>gi|229522722|ref|ZP_04412138.1| protease-related protein [Vibrio cholerae TM 11079-80]
 gi|229340707|gb|EEO05713.1| protease-related protein [Vibrio cholerae TM 11079-80]
          Length = 1084

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 81/254 (31%), Gaps = 43/254 (16%)

Query: 211 DQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           D     P +      SP+ QK+A+             +          +         P 
Sbjct: 32  DSTQARPTWLRDIALSPDGQKIAFTYAGQ------IWLVPAQGGDAVALTESCVYSETPI 85

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S + +    +  +    D++ + +Q   + RLT     +I  ++S D  Q+ F S R G
Sbjct: 86  WSPDSQSIAFTADRYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLG 145

Query: 325 KE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            +             QLY + + G  ++RI      +  D   SP    I +T       
Sbjct: 146 DDKANANVKQGSFMAQLYSVPAAGGREQRIL---PIAISDLAISPSHSDILYTNQPSDEQ 202

Query: 367 -------SGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  S     I       G   ++       + P WS  G S+ +  ++ G     +
Sbjct: 203 PWRKGALSDATRDIWQWSPRTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSF--NI 260

Query: 419 YSIDLNGRNETLIN 432
           +    +G     I 
Sbjct: 261 WQQRFDGSEPVQIT 274



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 71/205 (34%), Gaps = 30/205 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G++   +     A  I+ V  Q      LT +   + +  +SPDS  I F +DR 
Sbjct: 45  ALSPDGQKIAFTY----AGQIWLVPAQGGDAVALTESCVYSETPIWSPDSQSIAFTADRY 100

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------ 371
           G   ++++   G + +R++    A      +S  G  + F+                   
Sbjct: 101 GLGDVFILSIQGGESRRLTYHG-AKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFM 159

Query: 372 -AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYS 420
             +  +   G +E+ ++    +     SPS   ++++ +             D    ++ 
Sbjct: 160 AQLYSVPAAGGREQRIL-PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQ 218

Query: 421 ID-LNGRNETLINTPAYASDPQWVG 444
                G++  +        +P W  
Sbjct: 219 WSPRTGKHTQITTFRGEDRNPVWSA 243



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 99/331 (29%), Gaps = 89/331 (26%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRID 247
           G + R        I +   FS + Q++ +++    D            + ++Y +     
Sbjct: 113 GESRRLTYHGAKDIPY--AFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAGG 170

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIYSVDLQSNATE 295
           R  + +      I     S +    L + Q             D   DI+    ++    
Sbjct: 171 REQRIL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQWSPRTGKHT 227

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------------ 343
           ++T     + +  +S D S + + S++ G   ++  + +GS+  +I+             
Sbjct: 228 QITTFRGEDRNPVWSADGSSMYYLSEQAGSFNIWQQRFDGSEPVQITDHQKLPVRFLSAS 287

Query: 344 ---DKEASYFDPVW--------------------SPQGDLIAFTKFSGEKF--------- 371
              D    +   +W                     P G           +          
Sbjct: 288 LQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEATEMVVAPNAAEV 347

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT---------G 415
                  + V+       + + +    +   ++S  G  LI++ +++G           G
Sbjct: 348 AIVARGDVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSYVNDG 407

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            K +S  L+   E ++ T      P +   +
Sbjct: 408 GKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 341 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDVSFSSDGYRLIYASERE 394

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   +                  LT    + I   YSP+  +IV+   RE +  L
Sbjct: 395 GSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDV-IQPLYSPNLKRIVY---RENRNTL 450

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + I     +     I ++K DGS+ 
Sbjct: 451 KVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEA 510

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNG 425
            + L +    + AP +S  G+ + +     G  D    +   D+ G
Sbjct: 511 PINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDMVVQYDVYG 556



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 99/286 (34%), Gaps = 41/286 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------KVAYATYDDEDILRVYLMDTR 245
           +     DG+    +T  +   +     S           ++       +   +V +   R
Sbjct: 260 IWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRR 319

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +   NF         + N     I  + D    +Y V L S  T+R+T+T    
Sbjct: 320 SAMPDGRHNVNFNLEATEMVVAPNAAEVAIVARGD----VYVVSLLSGLTQRITDTPEAE 375

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPV 353
              S+S D  ++++ S+REG   LY    N             ++  ++ +++     P+
Sbjct: 376 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQD--VIQPL 433

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIF 406
           +SP    I + +       + V   +  +   L++   L +         WSP    ++ 
Sbjct: 434 YSPNLKRIVYRENRNT---LKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVT 490

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGFM 446
             +   +   +L   D +     L  +      P +++D QWV ++
Sbjct: 491 RDRAMSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWL 536



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 19/174 (10%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+  +   ++ + Y+ D        +D   + +      ++ P +S N 
Sbjct: 379 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR +    ++    +   D++ + T  L +   +      ++S  +SPDS  IV   DR 
Sbjct: 439 KRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV-TRDRA 494

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                + +++ +GS+          S F P +S  G  + +   +     I  M
Sbjct: 495 MSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDM 548


>gi|317037459|ref|XP_001398515.2| hypothetical protein ANI_1_970164 [Aspergillus niger CBS 513.88]
          Length = 650

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 75/198 (37%), Gaps = 25/198 (12%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           + L V + DG+N R L  +     +  ++SP+ + + + +    D               
Sbjct: 35  SELYVANADGSNPRLLLGNESTFDYHAQWSPDGEWIVFTSERAGDGQSDLYRVRPNGTDL 94

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNT--------- 300
           + I    ++  A   S NG     +    +   +I+  +L + A   +TN+         
Sbjct: 95  QPIATSPAVEDAGAISPNGSLVAFAGTLGNYKSNIWIQNLDTGALWNVTNSTEVAGDYTL 154

Query: 301 LFINISASYSPDSSQIVFESDREGKEQ---------------LYVMQSNGSDQKRISQDK 345
              +   ++SPD   +VF SDR    +               +Y ++ +G+  +R++   
Sbjct: 155 PDGHFRPAWSPDGEWLVFTSDRNTPWRGHNNISGWEHTQELSIYAIRPDGTGFRRVANRT 214

Query: 346 EASYFDPVWSPQGDLIAF 363
                 P +SP G+ I F
Sbjct: 215 GYCQGSPKFSPDGNRIVF 232



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 74/201 (36%), Gaps = 28/201 (13%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS 291
             I  +Y+ +         +GN  +     ++S +G+  + + ++  D   D+Y V    
Sbjct: 32  PGISELYVANADGSNPRLLLGNESTFDYHAQWSPDGEWIVFTSERAGDGQSDLYRVRPNG 91

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKE---- 346
              + +  +  +  + + SP+ S + F       K  +++   +      ++   E    
Sbjct: 92  TDLQPIATSPAVEDAGAISPNGSLVAFAGTLGNYKSNIWIQNLDTGALWNVTNSTEVAGD 151

Query: 347 ----ASYFDPVWSPQGDLIAFTKFSGEKFA---------------IGVMKKDGSQERLLV 387
                 +F P WSP G+ + FT      +                I  ++ DG+  R + 
Sbjct: 152 YTLPDGHFRPAWSPDGEWLVFTSDRNTPWRGHNNISGWEHTQELSIYAIRPDGTGFRRVA 211

Query: 388 EDSNLQ--APTWSPSGRSLIF 406
             +     +P +SP G  ++F
Sbjct: 212 NRTGYCQGSPKFSPDGNRIVF 232



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 62/141 (43%), Gaps = 20/141 (14%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGS 381
           G  +LYV  ++GS+ + +  ++    +   WSP G+ I FT       +  +  ++ +G+
Sbjct: 33  GISELYVANADGSNPRLLLGNESTFDYHAQWSPDGEWIVFTSERAGDGQSDLYRVRPNGT 92

Query: 382 QERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINT------ 433
             + +     ++     SP+G  + F+    G+  S ++  +L+ G    + N+      
Sbjct: 93  DLQPIATSPAVEDAGAISPNGSLVAFAGTL-GNYKSNIWIQNLDTGALWNVTNSTEVAGD 151

Query: 434 ---------PAYASDPQWVGF 445
                    PA++ D +W+ F
Sbjct: 152 YTLPDGHFRPAWSPDGEWLVF 172



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 87/273 (31%), Gaps = 49/273 (17%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR---------APKRIGNFRSMILAPRFS 266
            P+ S    KV Y +    +   V +                  +   +  +      + 
Sbjct: 376 FPQMSAQG-KVVYTSQQTVNSSLVTMNADGTGSNDIFDGSRFPVRVNSSNTNGTFQGSWR 434

Query: 267 SNGKRAL------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-- 318
            +G+            +      +Y V    +    +TN        + SPD   +V+  
Sbjct: 435 GDGEVLAVGLGDWFEYRYANPGWVYLVAANGSWARSMTNGSTNAGFPTISPDGRWLVWRE 494

Query: 319 ----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKFS------ 367
                S+      L  M     D   +S   + +   P+++P G + I FT+ +      
Sbjct: 495 FAYSASEDPIPLGLRRMDLTTGDVVALSSSWDNT---PMFAPDGSNRIVFTRRTSWPISG 551

Query: 368 --GEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSR------------KKDG 412
              + + +  M  DGS  R L + + N     W+  G+ + ++               + 
Sbjct: 552 PLDDNYDVMTMAVDGSDVRQLTKLACNDAHAVWTHEGK-IAWATGMFGFQDEATIYDNNQ 610

Query: 413 DTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
                +  ++ +G N T++    +  + P ++ 
Sbjct: 611 QPYPFIMQMEADGSNWTVLTQSRWEDTMPLYIP 643



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 57/350 (16%), Positives = 104/350 (29%), Gaps = 91/350 (26%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA------------- 229
           S      + S+  +  DG   R +          P+FSP+  ++ +              
Sbjct: 187 SGWEHTQELSIYAIRPDGTGFRRVANRTGYCQGSPKFSPDGNRIVFYELPMELTYYARVA 246

Query: 230 ---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG------KRALISVQKDE 280
               YD    +      T  DR     G    + L P++  N       K  L +     
Sbjct: 247 EPAFYDVNTAIVSVDFATGTDRQVHASGESGGIKLFPQYVDNQTIGYLVKSLLTNATYPG 306

Query: 281 AMDIYSVDLQSNATERLTNTL--FINISASYSPDS------------------------- 313
           +++  +   Q + +    N      + S ++SPD                          
Sbjct: 307 SINYTAAQPQGSVSAAYRNASLVGYHRSPAWSPDGGHMVYEHVEWDPVRPINKPLYSWSK 366

Query: 314 ----------------SQIVFESDREGKEQLYVMQSNGSD----------QKRISQDKEA 347
                            ++V+ S +     L  M ++G+             R++     
Sbjct: 367 DWEYRFSDVFPQMSAQGKVVYTSQQTVNSSLVTMNADGTGSNDIFDGSRFPVRVNSSNTN 426

Query: 348 SYFDPVWSPQGDLIA------FTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPS 400
             F   W   G+++A      F         + ++  +GS  R +   S N   PT SP 
Sbjct: 427 GTFQGSWRGDGEVLAVGLGDWFEYRYANPGWVYLVAANGSWARSMTNGSTNAGFPTISPD 486

Query: 401 GRSLIF----SRKKDGDTGSKLYSIDLNGRNETLI-----NTPAYASDPQ 441
           GR L++        +      L  +DL   +   +     NTP +A D  
Sbjct: 487 GRWLVWREFAYSASEDPIPLGLRRMDLTTGDVVALSSSWDNTPMFAPDGS 536



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +   + +     + V   DGS  RLL+  E +      WSP G  ++F+ ++ GD  S L
Sbjct: 25  MLMNRIAPGISELYVANADGSNPRLLLGNESTFDYHAQWSPDGEWIVFTSERAGDGQSDL 84

Query: 419 YSIDLNGRNETLINT 433
           Y +  NG +   I T
Sbjct: 85  YRVRPNGTDLQPIAT 99



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/177 (12%), Positives = 66/177 (37%), Gaps = 25/177 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK- 251
           + ++  +G+  R +T       F P  SP+ + + +  +          +  R       
Sbjct: 458 VYLVAANGSWARSMTNGSTNAGF-PTISPDGRWLVWREFAYSASEDPIPLGLRRMDLTTG 516

Query: 252 -RIGNFRSMILAPRFSSNG-KRALISVQK--------DEAMDIYSVDLQSNATERLTNTL 301
             +    S    P F+ +G  R + + +         D+  D+ ++ +  +   +LT   
Sbjct: 517 DVVALSSSWDNTPMFAPDGSNRIVFTRRTSWPISGPLDDNYDVMTMAVDGSDVRQLTKLA 576

Query: 302 FINISASYSPDSS-------------QIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             +  A ++ +                 +++++++    +  M+++GS+   ++Q +
Sbjct: 577 CNDAHAVWTHEGKIAWATGMFGFQDEATIYDNNQQPYPFIMQMEADGSNWTVLTQSR 633


>gi|124010592|ref|ZP_01695210.1| putative protease [Microscilla marina ATCC 23134]
 gi|123982223|gb|EAY23818.1| putative protease [Microscilla marina ATCC 23134]
          Length = 716

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 51/296 (17%), Positives = 109/296 (36%), Gaps = 23/296 (7%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
             D    E+ L+      Q      F        I H       Q +  EK       ++
Sbjct: 263 ASDENTGEYNLY-TFRNGQKTALTKFDDA-----IKHPFVSANGQRVVFEKNY--QLYIY 314

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              S  S  +   +   +    NI + T    +       +P+ +K+A+    +     +
Sbjct: 315 KVASKQSQKLDIQIYKNNTLKKNITFRTQGFIRAY---DIAPDHKKIAFVARGE-----L 366

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLT 298
           ++ D +     +        ++   +  N +R L S      ++ + +D       ++LT
Sbjct: 367 FVSDIKGKYIRQITTKPDDRVVEVHWLKNSQRLLFSQTVGGYLNWFIIDANGQGKEKQLT 426

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSP 356
                N   S++ D S+ V+ S   G+ ++ ++       + +++D+   + +  PV+SP
Sbjct: 427 ADKQNNRLLSFNSDRSKAVYLS---GRNEVRIINLRSFKNETVAKDELWGFQNDLPVFSP 483

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKD 411
            G  IA+T +   +  I +      Q   L +    + +P WSP G+ + F   + 
Sbjct: 484 DGQYIAYTAYRNFERDIFLYHIKKKQLIQLTKTGISEVSPRWSPDGKYIYFVSNRS 539



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 53/140 (37%), Gaps = 9/140 (6%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G   + S + D  +    +D Q  A  R+T    +   A  SPD   + F + +
Sbjct: 64  PTLSPDGNTVIFSYEGD--LWKLPLDQQQRAATRITAMQGLETRAKVSPDGQWLAFSASQ 121

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G   +++M   G +  +++   ++      WS     I F+     +++   +   G  
Sbjct: 122 YGNTDVFLMPMKGGEVVQLTFY-DSFDHVESWSWDSQWIYFSSNRYNQYSTYKVAAKGGT 180

Query: 383 ERLLVEDS------NLQAPT 396
            + + +          + PT
Sbjct: 181 PQRVFDHYFHTVHNLFEHPT 200



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/268 (13%), Positives = 100/268 (37%), Gaps = 36/268 (13%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAY--------ATYDDEDILRVYLMDTRIDRAPKRIG 254
            +      D  +  P  S N Q+V +             +   ++ +   + +   K I 
Sbjct: 280 QKTALTKFDDAIKHPFVSANGQRVVFEKNYQLYIYKVASKQSQKLDIQIYKNNTLKKNIT 339

Query: 255 -NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPD 312
              +  I A   + + K+     +     +++  D++     ++T      +    +  +
Sbjct: 340 FRTQGFIRAYDIAPDHKKIAFVARG----ELFVSDIKGKYIRQITTKPDDRVVEVHWLKN 395

Query: 313 SSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           S +++F     G    +++ +NG   +K+++ DK+ +      S +   +  +  +    
Sbjct: 396 SQRLLFSQTVGGYLNWFIIDANGQGKEKQLTADKQNNRLLSFNSDRSKAVYLSGRN---- 451

Query: 372 AIGVMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            + ++     +   + +D         P +SP G+ + ++  ++ +    LY I    + 
Sbjct: 452 EVRIINLRSFKNETVAKDELWGFQNDLPVFSPDGQYIAYTAYRNFERDIFLYHI----KK 507

Query: 428 ETLIN---------TPAYASDPQWVGFM 446
           + LI          +P ++ D +++ F+
Sbjct: 508 KQLIQLTKTGISEVSPRWSPDGKYIYFV 535



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 4/130 (3%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
                P  SP+   V ++   + D+ ++ L      RA  RI   + +    + S +G+ 
Sbjct: 59  YFTSYPTLSPDGNTVIFSY--EGDLWKLPLDQ--QQRAATRITAMQGLETRAKVSPDGQW 114

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S  +    D++ + ++     +LT     +   S+S DS  I F S+R  +   Y +
Sbjct: 115 LAFSASQYGNTDVFLMPMKGGEVVQLTFYDSFDHVESWSWDSQWIYFSSNRYNQYSTYKV 174

Query: 332 QSNGSDQKRI 341
            + G   +R+
Sbjct: 175 AAKGGTPQRV 184



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 65/157 (41%), Gaps = 3/157 (1%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            ++D +G        +  Q      F+ ++ K  Y +    + +R+  + +  +    + 
Sbjct: 412 FIIDANGQGKEKQLTADKQNNRLLSFNSDRSKAVYLS--GRNEVRIINLRSFKNETVAKD 469

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             +      P FS +G+    +  ++   DI+   ++     +LT T    +S  +SPD 
Sbjct: 470 ELWGFQNDLPVFSPDGQYIAYTAYRNFERDIFLYHIKKKQLIQLTKTGISEVSPRWSPDG 529

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             I F S+R      Y + +NG+   R++ DK  + F
Sbjct: 530 KYIYFVSNRSRPFYPYGI-TNGTHVYRLALDKFDAEF 565



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 85/231 (36%), Gaps = 8/231 (3%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
              +G   +  +      ++ + +  L V D  G  IR +T   D  + E  +  N Q++
Sbjct: 340 FRTQGFIRAYDIAPDHKKIAFVARGELFVSDIKGKYIRQITTKPDDRVVEVHWLKNSQRL 399

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            + +      L  +++D       K++   +       F+S+  +A+         ++  
Sbjct: 400 LF-SQTVGGYLNWFIIDANGQGKEKQLTADKQNNRLLSFNSDRSKAVY---LSGRNEVRI 455

Query: 287 VDLQSNATERLTNTL---FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           ++L+S   E +       F N    +SPD   I + + R  +  +++         ++++
Sbjct: 456 INLRSFKNETVAKDELWGFQNDLPVFSPDGQYIAYTAYRNFERDIFLYHIKKKQLIQLTK 515

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
               S   P WSP G  I F       F    +       RL ++  + + 
Sbjct: 516 TG-ISEVSPRWSPDGKYIYFVSNRSRPFYPYGITNGTHVYRLALDKFDAEF 565



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 92/293 (31%), Gaps = 31/293 (10%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQI 213
           AH  +       T      +   L    + V    +  L  +  D          +   +
Sbjct: 49  AHLCAQTTETYFT------SYPTLSPDGNTVIFSYEGDLWKLPLDQQQRAATRITAMQGL 102

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
               + SP+ Q +A++     +   V+LM  +     + +  + S      +S + +   
Sbjct: 103 ETRAKVSPDGQWLAFSASQYGNT-DVFLMPMKGGEVVQ-LTFYDSFDHVESWSWDSQWIY 160

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLF----------INISASYSPDSSQIVFESDRE 323
            S  +      Y V  +    +R+ +  F           N    ++       F   R+
Sbjct: 161 FSSNRYNQYSTYKVAAKGGTPQRVFDHYFHTVHNLFEHPTNGELFFNEGWESKAFI-QRK 219

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPV-WS--PQGDLIAFTKFSG-EKFAIGVMKKD 379
             +  +       + +  +  K   Y     W+   Q   I F       ++ +   + +
Sbjct: 220 RYKGAFNPDIQSYNPQTNTYKKYTQYKGKDLWATLDQKGNIYFASDENTGEYNLYTFR-N 278

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           G +  L   D  ++ P  S +G+ ++F      +   +LY   +  +    ++
Sbjct: 279 GQKTALTKFDDAIKHPFVSANGQRVVF------EKNYQLYIYKVASKQSQKLD 325



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 42/105 (40%), Gaps = 8/105 (7%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                P  SP G+ + F  + G+ + + + ++  +  R+            SP G+ L F
Sbjct: 59  YFTSYPTLSPDGNTVIF-SYEGDLWKLPLDQQQRAATRITAMQGLETRAKVSPDGQWLAF 117

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLI------NTPAYASDPQWVGF 445
           S  + G+T   L  +   G    L       +  +++ D QW+ F
Sbjct: 118 SASQYGNTDVFLMPMKG-GEVVQLTFYDSFDHVESWSWDSQWIYF 161


>gi|226355054|ref|YP_002784794.1| Dipeptidyl aminopeptidase [Deinococcus deserti VCD115]
 gi|226317044|gb|ACO45040.1| putative Dipeptidyl aminopeptidase [Deinococcus deserti VCD115]
          Length = 609

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 54/262 (20%), Positives = 104/262 (39%), Gaps = 16/262 (6%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPR--FSPNQQKVAYATYDDEDILR-VYLMDT 244
             +  L V D      R LT             +S +   + ++  ++ D  + ++ ++ 
Sbjct: 35  TGRFELYVQDLRSGERRQLTNGEAPKAVRAAFIWSHDDAHLYFSRDENGDERQALFELEV 94

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTNTL 301
              +      + +SM  A     +G R L++  +   M+++  D      +A   LT   
Sbjct: 95  ASGKVRALQHDPQSMDYAADVHPDG-RLLVNSTRGGMMNVHIYDPAAPKDSAWTVLTRQP 153

Query: 302 FINISASYSPDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQ 357
              ++A++SPD +++   ++          YV+ ++GS  +RI + +E S      W P 
Sbjct: 154 NTTMAAAFSPDGTRLTVTTNESPDLRNTDGYVLNADGSGLRRIFRVREGSRDSVGHWHPD 213

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAP-TWSPSGRSLIFSRKKDGDT 414
           G  +A +  +     +G++  D  + R L    D   + P  +SP GR L   R  D   
Sbjct: 214 GQRVAVSSDASGSGRVGLLTVDTGEVRWLTSENDQTEEMPGRFSPDGRWLSALRNVDSTL 273

Query: 415 GSKLYSIDLNGRNETLINTPAY 436
              LY  D    +E  +  PA 
Sbjct: 274 TPVLY--DTGTGHERTLKLPAG 293



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 75/210 (35%), Gaps = 6/210 (2%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
              +G  + +L  ++     +R L      + +     P+ + +  +T      + +Y  
Sbjct: 79  RDENGDERQALFELEVASGKVRALQHDPQSMDYAADVHPDGRLLVNSTRGGMMNVHIYDP 138

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERLT- 298
               D A   +    +  +A  FS +G R  ++  +       D Y ++   +   R+  
Sbjct: 139 AAPKDSAWTVLTRQPNTTMAAAFSPDGTRLTVTTNESPDLRNTDGYVLNADGSGLRRIFR 198

Query: 299 -NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSP 356
                 +    + PD  ++   SD  G  ++ ++  +  + + ++ + + +   P  +SP
Sbjct: 199 VREGSRDSVGHWHPDGQRVAVSSDASGSGRVGLLTVDTGEVRWLTSENDQTEEMPGRFSP 258

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            G  ++  +         +       ER L
Sbjct: 259 DGRWLSALRNVDSTLTPVLYDTGTGHERTL 288



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 87/246 (35%), Gaps = 26/246 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF---RSMILAPRFSSNGKRALISV 276
           S +   +A+          +Y+ D R     +++ N    +++  A  +S +      S 
Sbjct: 22  SNSGNHIAFYADWTGR-FELYVQDLRSGE-RRQLTNGEAPKAVRAAFIWSHDDAHLYFSR 79

Query: 277 QKDE--AMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            ++      ++ +++ S     L +    ++ +A   PD   +V  S R G   +++   
Sbjct: 80  DENGDERQALFELEVASGKVRALQHDPQSMDYAADVHPDGRLLV-NSTRGGMMNVHIYDP 138

Query: 334 N---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLV 387
                S    +++    +     +SP G  +  T             V+  DGS  R + 
Sbjct: 139 AAPKDSAWTVLTRQPNTTMAA-AFSPDGTRLTVTTNESPDLRNTDGYVLNADGSGLRRIF 197

Query: 388 ---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID------LNGRNETLINTPA-YA 437
              E S      W P G+ +  S    G     L ++D      L   N+     P  ++
Sbjct: 198 RVREGSRDSVGHWHPDGQRVAVSSDASGSGRVGLLTVDTGEVRWLTSENDQTEEMPGRFS 257

Query: 438 SDPQWV 443
            D +W+
Sbjct: 258 PDGRWL 263



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 65/177 (36%), Gaps = 11/177 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQIVFESD 321
            S++G             ++Y  DL+S    +LTN      +  +  +S D + + F  D
Sbjct: 21  VSNSGNHIAFYADWTGRFELYVQDLRSGERRQLTNGEAPKAVRAAFIWSHDDAHLYFSRD 80

Query: 322 REG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK- 378
             G  ++ L+ ++      + +  D ++  +     P G L+      G    + +    
Sbjct: 81  ENGDERQALFELEVASGKVRALQHDPQSMDYAADVHPDGRLLV-NSTRGGMMNVHIYDPA 139

Query: 379 ---DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-TGSKLYSIDLNGRNETLI 431
              D +   L  + +   A  +SP G  L  +  +  D   +  Y ++ +G     I
Sbjct: 140 APKDSAWTVLTRQPNTTMAAAFSPDGTRLTVTTNESPDLRNTDGYVLNADGSGLRRI 196



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 46/139 (33%), Gaps = 3/139 (2%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI-LFEPRFSPNQQKVAYATYDDEDILR 238
           V+ +    +      V++ DG+ +R +   R+        + P+ Q+VA  + D     R
Sbjct: 170 VTTNESPDLRNTDGYVLNADGSGLRRIFRVREGSRDSVGHWHPDGQRVA-VSSDASGSGR 228

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           V L+                    P RFS +G+        D  +     D  +     L
Sbjct: 229 VGLLTVDTGEVRWLTSENDQTEEMPGRFSPDGRWLSALRNVDSTLTPVLYDTGTGHERTL 288

Query: 298 TNTLFINISASYSPDSSQI 316
                I     ++   +++
Sbjct: 289 KLPAGIAAGTDFALGGTKL 307


>gi|15600815|ref|NP_232445.1| hypothetical protein VCA0044 [Vibrio cholerae O1 biovar eltor str.
           N16961]
 gi|9657426|gb|AAF95958.1| hypothetical protein VC_A0044 [Vibrio cholerae O1 biovar El Tor
           str. N16961]
          Length = 714

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 81/254 (31%), Gaps = 43/254 (16%)

Query: 211 DQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           D     P +      SP+ QK+A+             +          +         P 
Sbjct: 32  DSTQARPTWLRDIALSPDGQKIAFTYAGQ------IWLVPAQGGDAVALTESGVYSETPI 85

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S + +    +  +    D++ + +Q   + RLT     +I  ++S D  Q+ F S R G
Sbjct: 86  WSPDSQSIAFTADRYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLG 145

Query: 325 KE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            +             QLY + + G  ++R+      +  D   SP    I +T       
Sbjct: 146 DDKANANVKQGSFMAQLYSVPAAGGREQRVL---PIAISDLAISPSHSDILYTNQPSDEQ 202

Query: 367 -------SGEKFAIG-VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  S     I       G   ++       + P WS  G S+ +  ++ G     +
Sbjct: 203 PWRKGALSDATRDIWQWSPLTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSF--NV 260

Query: 419 YSIDLNGRNETLIN 432
           +    +G     I 
Sbjct: 261 WQQRFDGSEPVQIT 274



 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 30/205 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G++   +     A  I+ V  Q      LT +   + +  +SPDS  I F +DR 
Sbjct: 45  ALSPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRY 100

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------ 371
           G   ++++   G + +R++    A      +S  G  + F+                   
Sbjct: 101 GLGDVFILSIQGGESRRLTYHG-AKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFM 159

Query: 372 -AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYS 420
             +  +   G +E+ ++    +     SPS   ++++ +             D    ++ 
Sbjct: 160 AQLYSVPAAGGREQRVL-PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQ 218

Query: 421 ID-LNGRNETLINTPAYASDPQWVG 444
              L G++  +        +P W  
Sbjct: 219 WSPLTGKHTQITTFRGEDRNPVWSA 243



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 98/331 (29%), Gaps = 89/331 (26%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRID 247
           G + R        I +   FS + Q++ +++    D            + ++Y +     
Sbjct: 113 GESRRLTYHGAKDIPY--AFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAGG 170

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIYSVDLQSNATE 295
           R  + +      I     S +    L + Q             D   DI+     +    
Sbjct: 171 REQRVL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQWSPLTGKHT 227

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------------ 343
           ++T     + +  +S D S + + S++ G   ++  + +GS+  +I+             
Sbjct: 228 QITTFRGEDRNPVWSADGSSMYYLSEQAGSFNVWQQRFDGSEPVQITDHQKLPVRFLSAS 287

Query: 344 ---DKEASYFDPVW--------------------SPQGDLIAFTKFSGEKF--------- 371
              D    +   +W                     P G           +          
Sbjct: 288 LQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEATEMVVAPNAAEV 347

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT---------G 415
                  + V+       + + +    +   ++S  G  LI++ +++G           G
Sbjct: 348 AIVARGDVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSYVNDG 407

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            K +S  L+   E ++ T      P +   +
Sbjct: 408 GKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 341 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDVSFSSDGYRLIYASERE 394

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   +                  LT    + I   YSP+  +IV+   RE +  L
Sbjct: 395 GSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDV-IQPLYSPNLKRIVY---RENRNTL 450

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + I     +     I ++K DGS+ 
Sbjct: 451 KVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEA 510

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNG 425
            + L +    + AP +S  G+ + +     G  D    +   D+ G
Sbjct: 511 PINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDMVVQYDVYG 556



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 99/286 (34%), Gaps = 41/286 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------KVAYATYDDEDILRVYLMDTR 245
           +     DG+    +T  +   +     S           ++       +   +V +   R
Sbjct: 260 VWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRR 319

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +   NF         + N     I  + D    +Y V L S  T+R+T+T    
Sbjct: 320 SAMPDGRHNVNFNLEATEMVVAPNAAEVAIVARGD----VYVVSLLSGLTQRITDTPEAE 375

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPV 353
              S+S D  ++++ S+REG   LY    N             ++  ++ +++     P+
Sbjct: 376 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQD--VIQPL 433

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIF 406
           +SP    I + +       + V   +  +   L++   L +         WSP    ++ 
Sbjct: 434 YSPNLKRIVYRENRNT---LKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVT 490

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGFM 446
             +   +   +L   D +     L  +      P +++D QWV ++
Sbjct: 491 RDRAMSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWL 536



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 19/174 (10%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+  +   ++ + Y+ D        +D   + +      ++ P +S N 
Sbjct: 379 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR +    ++    +   D++ + T  L +   +      ++S  +SPDS  IV   DR 
Sbjct: 439 KRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV-TRDRA 494

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                + +++ +GS+          S F P +S  G  + +   +     I  M
Sbjct: 495 MSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDM 548


>gi|321312767|ref|YP_004205054.1| putative acylaminoacyl-peptidase [Bacillus subtilis BSn5]
 gi|320019041|gb|ADV94027.1| putative acylaminoacyl-peptidase [Bacillus subtilis BSn5]
          Length = 657

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 81/222 (36%), Gaps = 49/222 (22%)

Query: 259 MILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +  P+++ +G RA     +          +I+  + ++  +   T+    +    +SPD
Sbjct: 15  SVTDPQYAPDGTRAAYVKSQVNQEKDSYTSNIWIYETKTGGSVPWTHGEKRSTDPRWSPD 74

Query: 313 SSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              + F SDREG   QLY+M + G + ++++ D       P+WSP G+ I  T   GE  
Sbjct: 75  GRTLAFISDREGDAAQLYIMSTEGGEARKLT-DIPYGVSKPLWSPDGESILVTVSLGEGE 133

Query: 372 AIG------------------VMKKDGSQER-------------------LLVEDSNLQA 394
           +I                     K+DG                       L    ++   
Sbjct: 134 SIDDREKTEQDSYEPVEVQSLSYKRDGKGLTRGAYAQLVLVSVKSGEMKELTSHKADHGD 193

Query: 395 PTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLIN 432
           P +SP G+ L+FS       D      +Y + L   +   + 
Sbjct: 194 PAFSPDGKWLVFSANLTETDDASKPHDVYIMSLESGDLKQVT 235



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 103/317 (32%), Gaps = 72/317 (22%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDR---DGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           +R  +V   V       +  +       G ++ +     ++   +PR+SP+ + +A+ + 
Sbjct: 26  TRAAYVKSQVNQEKDSYTSNIWIYETKTGGSVPWT--HGEKRSTDPRWSPDGRTLAFISD 83

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------------- 277
            + D  ++Y+M T      +++ +    +  P +S +G+  L++V               
Sbjct: 84  REGDAAQLYIMSTE-GGEARKLTDIPYGVSKPLWSPDGESILVTVSLGEGESIDDREKTE 142

Query: 278 ----------------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                                 +     +  V ++S   + LT+    +   ++SPD   
Sbjct: 143 QDSYEPVEVQSLSYKRDGKGLTRGAYAQLVLVSVKSGEMKELTSHKADHGDPAFSPDGKW 202

Query: 316 IVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--- 366
           +VF +      D      +Y+M     D K+++  + +        P G  +A       
Sbjct: 203 LVFSANLTETDDASKPHDVYIMSLESGDLKQVTPHRGSFGSSSFS-PDGRYLALLGNEKE 261

Query: 367 --SGEKFAIGVMKKDGSQERLLVE----------------DSNLQAPTWSPSGRSLIFSR 408
             +       +   +  +   L E                    Q P W+   +      
Sbjct: 262 YKNATLSKAWLYDIEQGRLTCLTEMLDVHLADALIGDSLIGGAEQRPIWTKDSQGFYVIG 321

Query: 409 KKDGDTGSKLYSIDLNG 425
              G TG  +Y I + G
Sbjct: 322 TDQGSTG--IYYISIEG 336



 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 81/240 (33%), Gaps = 49/240 (20%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNG 269
           + +P+++P+  + AY           Y  +  I            +       PR+S +G
Sbjct: 16  VTDPQYAPDGTRAAYVKSQVNQEKDSYTSNIWIYETKTGGSVPWTHGEKRSTDPRWSPDG 75

Query: 270 KRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------- 321
           +       ++  A  +Y +  +     +LT+  +      +SPD   I+           
Sbjct: 76  RTLAFISDREGDAAQLYIMSTEGGEARKLTDIPYGVSKPLWSPDGESILVTVSLGEGESI 135

Query: 322 ----------------------REGKE-------QLYVMQSNGSDQKRISQDKEASYFDP 352
                                 R+GK        QL ++     + K ++  K A + DP
Sbjct: 136 DDREKTEQDSYEPVEVQSLSYKRDGKGLTRGAYAQLVLVSVKSGEMKELTSHK-ADHGDP 194

Query: 353 VWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
            +SP G  + F+        + +   + +M  +    + +     +  + ++SP GR L 
Sbjct: 195 AFSPDGKWLVFSANLTETDDASKPHDVYIMSLESGDLKQVTPHRGSFGSSSFSPDGRYLA 254



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 9/105 (8%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVED-SNLQAPTWSPS 400
           S  DP ++P G   A+ K    +        I + +                  P WSP 
Sbjct: 15  SVTDPQYAPDGTRAAYVKSQVNQEKDSYTSNIWIYETKTGGSVPWTHGEKRSTDPRWSPD 74

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
           GR+L F   ++GD  ++LY +   G     L + P   S P W  
Sbjct: 75  GRTLAFISDREGD-AAQLYIMSTEGGEARKLTDIPYGVSKPLWSP 118


>gi|73670480|ref|YP_306495.1| hypothetical protein Mbar_A3021 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397642|gb|AAZ71915.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 499

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 80/183 (43%), Gaps = 2/183 (1%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S  S   +  L +++ +   +  +    D+      +    +K+ Y     +   +++++
Sbjct: 151 STKSNGSQTGLYLVNLENGTVTPVADDLDKSESWGSWCRLGKKIVYTQKSGDAPSQLWIV 210

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTL 301
           +       KR+G   ++ +   +   G + + S     E  D+++++       +LT+T 
Sbjct: 211 NWD-GSNKKRLGTSENVGMGKDWCPLGLKIIYSANDSKEKPDLWTIEWYGTNQTQLTDTP 269

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +     SYSPD  +IV+ SD  GK ++++    GS +  ++ +       P WSP G  I
Sbjct: 270 YGEWDPSYSPDGKRIVYVSDEGGKPEIWLRNIKGSYKVMLTNNIGVIDSTPRWSPDGSKI 329

Query: 362 AFT 364
            FT
Sbjct: 330 VFT 332



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 96/236 (40%), Gaps = 8/236 (3%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            IL+  +   S  +++    M  +G+ I         +      +PN  ++  +T  +  
Sbjct: 101 HILYTVKRNGSDNLES--YKMKANGSEIERTGIGEGNLSSFSDVNPNGTELL-STKSNGS 157

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNAT 294
              +YL++           +         +   GK+ + +    D    ++ V+   +  
Sbjct: 158 QTGLYLVNLENGTVTPVADDLDKSESWGSWCRLGKKIVYTQKSGDAPSQLWIVNWDGSNK 217

Query: 295 ERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           +RL  +  + +   + P   +I++ + D + K  L+ ++  G++Q +++ D     +DP 
Sbjct: 218 KRLGTSENVGMGKDWCPLGLKIIYSANDSKEKPDLWTIEWYGTNQTQLT-DTPYGEWDPS 276

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFS 407
           +SP G  I +    G K  I +    GS + +L  +       P WSP G  ++F+
Sbjct: 277 YSPDGKRIVYVSDEGGKPEIWLRNIKGSYKVMLTNNIGVIDSTPRWSPDGSKIVFT 332



 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 100/251 (39%), Gaps = 11/251 (4%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSM 259
            NI +LT S +  LF P ++ +   + Y    +  D L  Y M        +      ++
Sbjct: 78  ENITFLTNSPESELF-PVWTADGNHILYTVKRNGSDNLESYKMKANGSEIERTGIGEGNL 136

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVF 318
                 + NG   L +        +Y V+L++     + + L       S+     +IV+
Sbjct: 137 SSFSDVNPNGTELLSTKSNGSQTGLYLVNLENGTVTPVADDLDKSESWGSWCRLGKKIVY 196

Query: 319 ESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVM 376
                    QL+++  +GS++KR+   +        W P G  I ++     EK  +  +
Sbjct: 197 TQKSGDAPSQLWIVNWDGSNKKRLGTSENVG-MGKDWCPLGLKIIYSANDSKEKPDLWTI 255

Query: 377 KKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +  G+ +  L +    +  P++SP G+ +++   + G    +++  ++ G  + ++    
Sbjct: 256 EWYGTNQTQLTDTPYGEWDPSYSPDGKRIVYVSDEGGK--PEIWLRNIKGSYKVMLTNNI 313

Query: 436 YASD--PQWVG 444
              D  P+W  
Sbjct: 314 GVIDSTPRWSP 324



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 2/111 (1%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           D+    L +  S      K  L  ++  G N   LT +     ++P +SP+ +++ Y + 
Sbjct: 231 DWCPLGLKIIYSANDSKEKPDLWTIEWYGTNQTQLTDTPYG-EWDPSYSPDGKRIVYVS- 288

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           D+     ++L + +         N   +   PR+S +G + + +V K + +
Sbjct: 289 DEGGKPEIWLRNIKGSYKVMLTNNIGVIDSTPRWSPDGSKIVFTVHKMQNI 339



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI++VS+       K  + + +  G+    LT +   I   PR+SP+  K+ +  +  ++
Sbjct: 283 RIVYVSDEGG----KPEIWLRNIKGSYKVMLTNNIGVIDSTPRWSPDGSKIVFTVHKMQN 338

Query: 236 ILR 238
           IL 
Sbjct: 339 ILE 341


>gi|116620656|ref|YP_822812.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223818|gb|ABJ82527.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 672

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 96/295 (32%), Gaps = 65/295 (22%)

Query: 214 LFEPRFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           + +P+ SP+ + VA+         ++   +++++       P++I +       PR+S +
Sbjct: 32  IADPQISPDGKWVAFQVQTVDVPGNKKPAQIWIVPLN-GGTPQQITHDGEANQRPRWSPD 90

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------- 321
            KR      +  +  I+ +D      +++T+ +        S D   +VF S+       
Sbjct: 91  SKRIAYVSDRGGSSQIWMMDPDGGNAKQVTDVVTEADGHVLSGDGKNVVFTSEVFPECGA 150

Query: 322 ----------------------------------REGKEQLYVMQSNGSDQKRISQDKEA 347
                                              + +  + V    G   + ++     
Sbjct: 151 DNACNQKLIDAEKASKTKPRIYTELLYRHWTRWQSKRRMHILVAPIAGGPVRDLTPGPRD 210

Query: 348 ------SYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQ-ERLLVEDSNLQA 394
                    D   SP G  + ++  +           + V+   G Q +R+ +   +   
Sbjct: 211 VPPFSLGGDDFDVSPDGQEVCYSMNADAVPAISTNSDLYVVSIAGGQSKRITITPGSDTG 270

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSI----DLNGRNETLI-NTPAYASDPQWVG 444
           P +SP G+ + +  +  G   S  + +      +G+   L  +   + +   W  
Sbjct: 271 PRYSPDGKYIAWRSQLRGGYESDRFRLMTLERSSGKVNNLTESLDRWVNSFTWAP 325



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 100/304 (32%), Gaps = 67/304 (22%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +  V        + ++  +G   + +T   +     PR+SP+ +++AY + D     +++
Sbjct: 50  TVDVPGNKKPAQIWIVPLNGGTPQQITHDGE-ANQRPRWSPDSKRIAYVS-DRGGSSQIW 107

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV------------------------ 276
           +MD       K++ +  +       S +GK  + +                         
Sbjct: 108 MMDPD-GGNAKQVTDVVTEADGHVLSGDGKNVVFTSEVFPECGADNACNQKLIDAEKASK 166

Query: 277 -----------------QKDEAMDIYSVDLQSNATERLTNTLFINISAS--------YSP 311
                            Q    M I    +       LT     ++            SP
Sbjct: 167 TKPRIYTELLYRHWTRWQSKRRMHILVAPIAGGPVRDLTPGP-RDVPPFSLGGDDFDVSP 225

Query: 312 DSSQIVFESDREGKEQL------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           D  ++ +  + +    +      YV+   G   KRI+     S   P +SP G  IA+  
Sbjct: 226 DGQEVCYSMNADAVPAISTNSDLYVVSIAGGQSKRIT-ITPGSDTGPRYSPDGKYIAWRS 284

Query: 366 F-----SGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                   ++F +  +++   +   L E  D  + + TW+P   SL F+    G    ++
Sbjct: 285 QLRGGYESDRFRLMTLERSSGKVNNLTESLDRWVNSFTWAPDSASLFFTTTDRGRQAIQV 344

Query: 419 YSID 422
             + 
Sbjct: 345 IPLS 348



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 56/310 (18%), Positives = 108/310 (34%), Gaps = 64/310 (20%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--- 230
           + RI +VS+   S    + + +MD DG N + +T    +       S + + V + +   
Sbjct: 91  SKRIAYVSDRGGS----SQIWMMDPDGGNAKQVTDVVTEADGH-VLSGDGKNVVFTSEVF 145

Query: 231 -----------------YDDEDILRVYLMDT-------------RIDRAPKRIGNFRSMI 260
                               +   R+Y                  I  AP   G  R + 
Sbjct: 146 PECGADNACNQKLIDAEKASKTKPRIYTELLYRHWTRWQSKRRMHILVAPIAGGPVRDLT 205

Query: 261 LAPR-------------FSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTL 301
             PR              S +G+    S+  D         D+Y V +    ++R+T T 
Sbjct: 206 PGPRDVPPFSLGGDDFDVSPDGQEVCYSMNADAVPAISTNSDLYVVSIAGGQSKRITITP 265

Query: 302 FINISASYSPDSSQIVFESD-REG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             +    YSPD   I + S  R G    + +L  ++ +      +++  +       W+P
Sbjct: 266 GSDTGPRYSPDGKYIAWRSQLRGGYESDRFRLMTLERSSGKVNNLTESLDRWVNSFTWAP 325

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTG 415
               + FT     + AI V+   G   ++     N L     + +GR+++++ ++ G   
Sbjct: 326 DSASLFFTTTDRGRQAIQVIPLSGGAIKIAASGDNELDDMQLTRNGRTMVYT-QQSGVAP 384

Query: 416 SKLYSIDLNG 425
            ++Y     G
Sbjct: 385 VEIYRAASTG 394


>gi|218128507|ref|ZP_03457311.1| hypothetical protein BACEGG_00077 [Bacteroides eggerthii DSM 20697]
 gi|217989398|gb|EEC55711.1| hypothetical protein BACEGG_00077 [Bacteroides eggerthii DSM 20697]
          Length = 1086

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 75/222 (33%), Gaps = 38/222 (17%)

Query: 253 IGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +  F S   AP +      S +G     + + D    IY+V +      +LT     +  
Sbjct: 13  LAAFTSAQDAPLWLRHCAISPDGTTIAFTYKGD----IYTVPVDGGRAMQLTTNPAHDTE 68

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPD  +I F SDR G   +Y++   G + +R++     S     +S  G  I F+  
Sbjct: 69  PVWSPDGKRIAFASDRMGSMDVYIVSKEGGEPRRLTT-HSGSETPVAFSDAG-HILFSAD 126

Query: 367 -----------SGEKFA-IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---------I 405
                      S  +F  +  +  +G +  +L     ++  + +  G  L          
Sbjct: 127 IMPSAETVLFPSNGQFRQVYKVSVEGGRP-VLYSPMPMECISINKEGTVLYQDKKGYEDY 185

Query: 406 FSRKKDGDTGSKLYSIDLNGRN---ETLINTPAYASDPQWVG 444
           + + +       ++     G       L        +P W  
Sbjct: 186 WRKHQVSPIARDIWMY-APGEKPAYRQLTTFGGEDREPVWAP 226



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 80/221 (36%), Gaps = 31/221 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V +   R      ++    +    P +S +GKR   +  
Sbjct: 30  AISPDGTTIAFTY--KGDIYTVPVDGGRAM----QLTTNPAHDTEPVWSPDGKRIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +  +MD+Y V  +     RLT         ++S D+  I+F +D     +  +  SNG  
Sbjct: 84  RMGSMDVYIVSKEGGEPRRLTTHSGSETPVAFS-DAGHILFSADIMPSAETVLFPSNG-Q 141

Query: 338 QKRISQDKEASYFDPVWSP----------QGDLIAFTKFSGEKF-----------AIGVM 376
            +++ +         ++SP          +G ++   K   E +            I + 
Sbjct: 142 FRQVYKVSVEGGRPVLYSPMPMECISINKEGTVLYQDKKGYEDYWRKHQVSPIARDIWMY 201

Query: 377 KKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                    +L       + P W+P G+S  +  +++G   
Sbjct: 202 APGEKPAYRQLTTFGGEDREPVWAPDGKSFYYLSEENGTFN 242



 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 58/302 (19%), Positives = 111/302 (36%), Gaps = 40/302 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ E G FN            G    +  V       +R+L+ + D  L    +  +
Sbjct: 231 FYYLSEENGTFN------VYRRTPGAASAT-QVTHHTKQPVRFLSIAADGRLC---YGFD 280

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +        +   + + ++  + D+   R             S NGK     ++ D   
Sbjct: 281 GEIYTLVPGGEPRKVNISIVSDKSDKDLIRQIKSSGATEM-ALSPNGKEVAFVLRGD--- 336

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   +    T+++TNT        ++PD   +V+ S+R G  QLY       D+K  +
Sbjct: 337 -VYVTSVDYKTTKQVTNTPCQERGVDFAPDGRSLVYASERGGLWQLYTSAIVRKDEKLFT 395

Query: 343 Q----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---- 388
                      + EA+ F P +SP G  +AF +      AI V+       R +++    
Sbjct: 396 YATELKEERLTNSEAASFQPQYSPDGKEVAFLENRA---AIRVINLKTKAVRTVMDAKYQ 452

Query: 389 ---DSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP--Q 441
                  Q   WSP  + ++  F     G     +  ++ +G+ E +  T +  +D   +
Sbjct: 453 YSYSDGDQWFRWSPDSKWILSDFI-GIGGWNNKDVVLLNADGKGEMVNLTESGYTDGNAK 511

Query: 442 WV 443
           WV
Sbjct: 512 WV 513



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 88/250 (35%), Gaps = 30/250 (12%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V  G  +     +  D ++   +   +     E   SPN ++VA+    D     VY+  
Sbjct: 287 VPGGEPRKVNISIVSDKSDKDLIRQIKSSGATEMALSPNGKEVAFVLRGD-----VYVTS 341

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN----------- 292
               +  K++ N         F+ +G+  + + ++     +Y+  +              
Sbjct: 342 VDY-KTTKQVTNTPCQERGVDFAPDGRSLVYASERGGLWQLYTSAIVRKDEKLFTYATEL 400

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-- 350
             ERLTN+   +    YSPD  ++ F  +R     + V+       + +   K    +  
Sbjct: 401 KEERLTNSEAASFQPQYSPDGKEVAFLENRA---AIRVINLKTKAVRTVMDAKYQYSYSD 457

Query: 351 ---DPVWSPQGDLIA--FTKFSG-EKFAIGVMKKDGSQERL-LVEDSNLQAPT-WSPSGR 402
                 WSP    I   F    G     + ++  DG  E + L E         W   G+
Sbjct: 458 GDQWFRWSPDSKWILSDFIGIGGWNNKDVVLLNADGKGEMVNLTESGYTDGNAKWVLGGK 517

Query: 403 SLIFSRKKDG 412
           ++I++  + G
Sbjct: 518 AMIWTSDRAG 527



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 90/247 (36%), Gaps = 31/247 (12%)

Query: 222 NQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              +  +  +    I R +++       A +++  F      P ++ +GK      +++ 
Sbjct: 180 KGYEDYWRKHQVSPIARDIWMYAPGEKPAYRQLTTFGGEDREPVWAPDGKSFYYLSEENG 239

Query: 281 AMDIYSVDLQSNATERLTNTL---------FINISASYSPDSSQIVFESDREGKEQ---L 328
             ++Y     + +  ++T+             +    Y  D    ++     G+ +   +
Sbjct: 240 TFNVYRRTPGAASATQVTHHTKQPVRFLSIAADGRLCYGFDGE--IYTLVPGGEPRKVNI 297

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            ++  + SD+  I Q K +   +   SP G  +AF         + V   D    + +  
Sbjct: 298 SIVS-DKSDKDLIRQIKSSGATEMALSPNGKEVAFVLRGD----VYVTSVDYKTTKQVTN 352

Query: 389 DS-NLQAPTWSPSGRSLIFSRKKDG----------DTGSKLYSIDLNGRNETLINTPAYA 437
                +   ++P GRSL+++ ++ G              KL++     + E L N+ A +
Sbjct: 353 TPCQERGVDFAPDGRSLVYASERGGLWQLYTSAIVRKDEKLFTYATELKEERLTNSEAAS 412

Query: 438 SDPQWVG 444
             PQ+  
Sbjct: 413 FQPQYSP 419


>gi|115452667|ref|NP_001049934.1| Os03g0314500 [Oryza sativa Japonica Group]
 gi|108707813|gb|ABF95608.1| WD40-like Beta Propeller Repeat family protein, expressed [Oryza
           sativa Japonica Group]
 gi|113548405|dbj|BAF11848.1| Os03g0314500 [Oryza sativa Japonica Group]
 gi|125586045|gb|EAZ26709.1| hypothetical protein OsJ_10615 [Oryza sativa Japonica Group]
          Length = 730

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 108/294 (36%), Gaps = 69/294 (23%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI- 274
            P FS +  ++A+   + + +        R+        +    + +P ++S      + 
Sbjct: 396 FPTFSKDGSQLAFVDNEFKSVWLADSQGMRVVFK----TDGPDSVFSPLWNSKKDILYVC 451

Query: 275 ---SVQKDEAMDIYSV-DLQSN--ATERLTNTLFINISASYSPDSSQIVFESDREGK--- 325
              S +  E ++I+S+ ++ +    + +LT   F N   S +PD ++ VF S R+G    
Sbjct: 452 MGPSFKASETLEIHSIHNVSTGDRKSRQLTFGGFNNAFPSTNPDGTKFVFRSTRDGGAKY 511

Query: 326 -EQLYVM-QSNGSD--------QKRISQDKEASYFDPVWSPQGDLIAFTKFSG------- 368
            + LY+M  ++  +          R++   E +     WSP G  I F+           
Sbjct: 512 SKNLYIMEDADAGEGEDGSQSTVTRMT-AGEWTDTHCQWSPNGKWIVFSSNRDRPADAPE 570

Query: 369 -------EKFAIGVMK-KDGSQERLLVED----SNLQAPTWSPSGRSLIFSRK------- 409
                    FA+ +M     S  R++        ++  P +SP GRS+  +         
Sbjct: 571 RDHGLDPGYFAVYLMDVASRSVVRVIRSGYDVAGHVNHPVFSPDGRSIAVTSDLAAVTAD 630

Query: 410 --------KDGDTGSKLYSIDLN----GRNE------TLINTPAYASDPQWVGF 445
                           ++++D++     RNE       + ++    S P W  F
Sbjct: 631 PMSLPLFLHSVRPYGDIFTVDIDPDDMARNEDVEGFVRVTHSRYENSTPAWTVF 684



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 16/124 (12%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---------KEQ 327
           ++      Y  +L++  TERLT     +IS S SP   ++   S +              
Sbjct: 161 RRSPWNVAYKTNLRTGETERLTPPGTFDISPSVSPSGKKVAVASYQGKKWDGEIKNLNTN 220

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQE 383
           +YVM      Q R    +   +  P W  + D+I F +  G+     + +        + 
Sbjct: 221 IYVMSLENPSQDRERVIENGGW--PSWGSE-DVIFFHRKDGDGENSCWGVFRHTLSTGET 277

Query: 384 RLLV 387
             + 
Sbjct: 278 VRVT 281



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 13/89 (14%)

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-------GSK 417
           + S    A     + G  ERL    +   +P+ SPSG+ +  +  +            + 
Sbjct: 161 RRSPWNVAYKTNLRTGETERLTPPGTFDISPSVSPSGKKVAVASYQGKKWDGEIKNLNTN 220

Query: 418 LYSIDLNG---RNETLINTPAYASDPQWV 443
           +Y + L       E +I    +   P W 
Sbjct: 221 IYVMSLENPSQDRERVIENGGW---PSWG 246



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 44/150 (29%), Gaps = 19/150 (12%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------KDEAM 282
           +      V           +R+    +  ++P  S +GK+  ++           K+   
Sbjct: 160 ERRSPWNVAYKTNLRTGETERLTPPGTFDISPSVSPSGKKVAVASYQGKKWDGEIKNLNT 219

Query: 283 DIYSVDLQ--SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY---VMQSNGSD 337
           +IY + L+  S   ER+          S+  +        D +G+   +       +  +
Sbjct: 220 NIYVMSLENPSQDRERVIENGGW---PSWGSEDVIFFHRKDGDGENSCWGVFRHTLSTGE 276

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             R++     S            +A     
Sbjct: 277 TVRVTPAAFDSVTPAAI--DETRVAVAAIR 304


>gi|221311165|ref|ZP_03593012.1| hypothetical protein Bsubs1_17491 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315492|ref|ZP_03597297.1| hypothetical protein BsubsN3_17407 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320407|ref|ZP_03601701.1| hypothetical protein BsubsJ_17370 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324691|ref|ZP_03605985.1| hypothetical protein BsubsS_17521 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|255767740|ref|NP_391103.2| acylaminoacyl-peptidase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|251757426|sp|P39839|YUXL_BACSU RecName: Full=Uncharacterized peptidase yuxL
 gi|225185368|emb|CAB15213.2| putative acylaminoacyl-peptidase [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 657

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 81/222 (36%), Gaps = 49/222 (22%)

Query: 259 MILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +  P+++ +G RA     +          +I+  + ++  +   T+    +    +SPD
Sbjct: 15  SVTDPQYAPDGTRAAYVKSQVNQEKDSYTSNIWIYETKTGGSVPWTHGEKRSTDPRWSPD 74

Query: 313 SSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              + F SDREG   QLY+M + G + ++++ D       P+WSP G+ I  T   GE  
Sbjct: 75  GRTLAFISDREGDAAQLYIMSTEGGEARKLT-DIPYGVSKPLWSPDGESILVTVSLGEGE 133

Query: 372 AIG------------------VMKKDGSQER-------------------LLVEDSNLQA 394
           +I                     K+DG                       L    ++   
Sbjct: 134 SIDDREKTEQDSYEPVEVQGLSYKRDGKGLTRGAYAQLVLVSVKSGEMKELTSHKADHGD 193

Query: 395 PTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLIN 432
           P +SP G+ L+FS       D      +Y + L   +   + 
Sbjct: 194 PAFSPDGKWLVFSANLTETDDASKPHDVYIMSLESGDLKQVT 235



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 103/317 (32%), Gaps = 72/317 (22%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDR---DGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           +R  +V   V       +  +       G ++ +     ++   +PR+SP+ + +A+ + 
Sbjct: 26  TRAAYVKSQVNQEKDSYTSNIWIYETKTGGSVPWT--HGEKRSTDPRWSPDGRTLAFISD 83

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------------- 277
            + D  ++Y+M T      +++ +    +  P +S +G+  L++V               
Sbjct: 84  REGDAAQLYIMSTE-GGEARKLTDIPYGVSKPLWSPDGESILVTVSLGEGESIDDREKTE 142

Query: 278 ----------------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                                 +     +  V ++S   + LT+    +   ++SPD   
Sbjct: 143 QDSYEPVEVQGLSYKRDGKGLTRGAYAQLVLVSVKSGEMKELTSHKADHGDPAFSPDGKW 202

Query: 316 IVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--- 366
           +VF +      D      +Y+M     D K+++  + +        P G  +A       
Sbjct: 203 LVFSANLTETDDASKPHDVYIMSLESGDLKQVTPHRGSFGSSSFS-PDGRYLALLGNEKE 261

Query: 367 --SGEKFAIGVMKKDGSQERLLVE----------------DSNLQAPTWSPSGRSLIFSR 408
             +       +   +  +   L E                    Q P W+   +      
Sbjct: 262 YKNATLSKAWLYDIEQGRLTCLTEMLDVHLADALIGDSLIGGAEQRPIWTKDSQGFYVIG 321

Query: 409 KKDGDTGSKLYSIDLNG 425
              G TG  +Y I + G
Sbjct: 322 TDQGSTG--IYYISIEG 336



 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 81/240 (33%), Gaps = 49/240 (20%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNG 269
           + +P+++P+  + AY           Y  +  I            +       PR+S +G
Sbjct: 16  VTDPQYAPDGTRAAYVKSQVNQEKDSYTSNIWIYETKTGGSVPWTHGEKRSTDPRWSPDG 75

Query: 270 KRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------- 321
           +       ++  A  +Y +  +     +LT+  +      +SPD   I+           
Sbjct: 76  RTLAFISDREGDAAQLYIMSTEGGEARKLTDIPYGVSKPLWSPDGESILVTVSLGEGESI 135

Query: 322 ----------------------REGKE-------QLYVMQSNGSDQKRISQDKEASYFDP 352
                                 R+GK        QL ++     + K ++  K A + DP
Sbjct: 136 DDREKTEQDSYEPVEVQGLSYKRDGKGLTRGAYAQLVLVSVKSGEMKELTSHK-ADHGDP 194

Query: 353 VWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
            +SP G  + F+        + +   + +M  +    + +     +  + ++SP GR L 
Sbjct: 195 AFSPDGKWLVFSANLTETDDASKPHDVYIMSLESGDLKQVTPHRGSFGSSSFSPDGRYLA 254



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 39/105 (37%), Gaps = 9/105 (8%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVED-SNLQAPTWSPS 400
           S  DP ++P G   A+ K    +        I + +                  P WSP 
Sbjct: 15  SVTDPQYAPDGTRAAYVKSQVNQEKDSYTSNIWIYETKTGGSVPWTHGEKRSTDPRWSPD 74

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
           GR+L F   ++GD  ++LY +   G     L + P   S P W  
Sbjct: 75  GRTLAFISDREGD-AAQLYIMSTEGGEARKLTDIPYGVSKPLWSP 118


>gi|312889308|ref|ZP_07748862.1| amidohydrolase [Mucilaginibacter paludis DSM 18603]
 gi|311298185|gb|EFQ75300.1| amidohydrolase [Mucilaginibacter paludis DSM 18603]
          Length = 1075

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 34/210 (16%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                  +    S NGK  L ++  D    IY + +   +  ++T  + +N S  +SPD 
Sbjct: 55  TTSEGSNMDVDISPNGKLILFTLLGD----IYKLPITGGSATQITRGMAMNCSPVWSPDG 110

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDK---EASYFDPVWSPQGDLIAFTKFSGEK 370
            +I + SD  G   L++M + G  ++ +++ K    A +  P W+P G  ++  +     
Sbjct: 111 KKIAYISDESGGYGLHIMDTTGKSKRLLTKAKLPLYARFNAPKWTPDGLAVSVDQM---- 166

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               V    G +ERL   DSN+   +   +S  G   +F    D D       I  N  N
Sbjct: 167 ----VYPLIGGEERLP--DSNMPVDSFIGFSSDG---LFMYYSDFDLNGNTIIIKYNRIN 217

Query: 428 --ETLINTPAY---------ASDPQWVGFM 446
             +T+I T  +         + D +W+ ++
Sbjct: 218 SAKTIIYTARHKQDFSNVRVSPDGRWLTYI 247



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 83/244 (34%), Gaps = 25/244 (10%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  I + T     +  +   SPN + + +    D     +Y +      +  +I    +M
Sbjct: 49  GKTISFTTSEGSNMDVD--ISPNGKLILFTLLGD-----IYKLPI-TGGSATQITRGMAM 100

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL----FINISASYSPDSSQ 315
             +P +S +GK+      +     ++ +D    +   LT           +  ++PD   
Sbjct: 101 NCSPVWSPDGKKIAYISDESGGYGLHIMDTTGKSKRLLTKAKLPLYARFNAPKWTPDG-- 158

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAI 373
           +    D+     +         ++R+            +S  G  + ++ F  +G    I
Sbjct: 159 LAVSVDQMVYPLI-------GGEERLPDSNMPVDSFIGFSSDGLFMYYSDFDLNGNTIII 211

Query: 374 GVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              + + ++  +       +      SP GR L +  +K       L   D++ + E L+
Sbjct: 212 KYNRINSAKTIIYTARHKQDFSNVRVSPDGRWLTYIAEKLQRPTDSLMIYDISNKKERLL 271

Query: 432 NTPA 435
            +  
Sbjct: 272 ASLG 275



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 67/181 (37%), Gaps = 27/181 (14%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D      S+ +    T   T +   N+    SP+   I+F         +Y +   G   
Sbjct: 36  DPIAKFKSLPMGVGKTISFTTSEGSNMDVDISPNGKLILFTL----LGDIYKLPITGGSA 91

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-----SNLQ 393
            +I++    +   PVWSP G  IA+       + + +M   G  +RLL +      +   
Sbjct: 92  TQITRGMAMNC-SPVWSPDGKKIAYISDESGGYGLHIMDTTGKSKRLLTKAKLPLYARFN 150

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-------AYASDPQWVGFM 446
           AP W+P G  L  S  +            L G  E L ++         ++SD  ++ + 
Sbjct: 151 APKWTPDG--LAVSVDQ--------MVYPLIGGEERLPDSNMPVDSFIGFSSDGLFMYYS 200

Query: 447 D 447
           D
Sbjct: 201 D 201



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 52/314 (16%), Positives = 89/314 (28%), Gaps = 46/314 (14%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +T  K    +R      +     +     V    G   R L  S   +     FS +   
Sbjct: 138 LTKAKLPLYARFNAPKWTPDGLAVSVDQMVYPLIGGEER-LPDSNMPVDSFIGFSSDGLF 196

Query: 226 VAYATYD-DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-- 282
           + Y+ +D + + + +        +        +      R S +G+      +K +    
Sbjct: 197 MYYSDFDLNGNTIIIKYNRINSAKTIIYTARHKQDFSNVRVSPDGRWLTYIAEKLQRPTD 256

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDS---SQIVFESDR-----EGKEQLYVMQSN 334
            +   D+ SN  ERL  +L I     +SP         F SD          ++  +   
Sbjct: 257 SLMIYDI-SNKKERLLASLGI-----FSPGGLRHQHYSFSSDSKKLLIGYGGKIREISIE 310

Query: 335 GSDQKRISQDKEASY-----------------------FDPVWSPQGDLIAFTKFSGEKF 371
             +QK I      ++                        D   SP G  + F+       
Sbjct: 311 SGEQKVIPFSANVNFDLVGEKIYNTHRLLHDSLKVNYIRDARRSPDGSTLIFSALE---- 366

Query: 372 AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            I  M       R LV     Q  PT+S  G+ + +    D   G         G    +
Sbjct: 367 HIYTMSYPHGIPRTLVNQDQAQFHPTFSEDGKWVAYVTWSDNKGGQVWIVSSKGGNPVQI 426

Query: 431 INTPAYASDPQWVG 444
                  S P +  
Sbjct: 427 TKISGQYSSPCFSP 440



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 66/172 (38%), Gaps = 20/172 (11%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDRE 323
           S +G   + S        IY++         L N        ++S D   + +   SD +
Sbjct: 354 SPDGSTLIFSA----LEHIYTMSYPHGIPRTLVNQDQAQFHPTFSEDGKWVAYVTWSDNK 409

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---------FSGEKFAIG 374
           G  Q++++ S G +  +I++     Y  P +SP G  + F K           GE   + 
Sbjct: 410 GG-QVWIVSSKGGNPVQITKIS-GQYSSPCFSPDGKYLIFVKGEPHLGGRETPGENGKLI 467

Query: 375 VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDL 423
            +         L +  S    P +S  G+S+I+  ++  +    SKL   DL
Sbjct: 468 RLSLKDKHCEQLADSISLYNNPVFSFDGKSVIYKPRQIDNSSVESKLVVKDL 519



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 50/287 (17%), Positives = 102/287 (35%), Gaps = 46/287 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  M       R L   +DQ  F P FS + + VAY T+ D    +V+++ ++    P +
Sbjct: 368 IYTMSYPHGIPRTLVN-QDQAQFHPTFSEDGKWVAYVTWSDNKGGQVWIVSSK-GGNPVQ 425

Query: 253 IGNFRSMILAPRFSSNGKRALIS---------VQKDEAMDIYSVDLQSNATERLTNTLFI 303
           I        +P FS +GK  +               E   +  + L+    E+L +++ +
Sbjct: 426 ITKISGQYSSPCFSPDGKYLIFVKGEPHLGGRETPGENGKLIRLSLKDKHCEQLADSISL 485

Query: 304 NISASYSPDSSQIVF----ESDREGKEQLYVMQS----NGSDQKRISQDKEASYFDPVWS 355
             +  +S D   +++      +   + +L V              I  ++       + S
Sbjct: 486 YNNPVFSFDGKSVIYKPRQIDNSSVESKLVVKDLLTHKTSDFAVGIYDNESIKPLKSIPS 545

Query: 356 PQGDLIAFTKFSGEKFAIGVM-KKDGSQERLLVEDSNL----------QAPTWSPSGRSL 404
           P    I + K      ++ ++        ++++                 P W   G+ L
Sbjct: 546 PDEHYIVYLKNE----SLYLVPNLKLGSPQVIINSEMNLPIIRFAKSGFDPAWEDHGKKL 601

Query: 405 IFSRKKDGDTGSKLYSID----LNGRNETLINTPAYASDPQWVGFMD 447
            +S       G+K ++ID    ++     L   P+   D Q   F+D
Sbjct: 602 SWSY------GNKYFNIDPQKIIDAATSLLNANPSAKPDGQQ--FLD 640


>gi|240172096|ref|ZP_04750755.1| WD-40-like beta propeller repeat-containing protein [Mycobacterium
           kansasii ATCC 12478]
          Length = 339

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 56/312 (17%), Positives = 106/312 (33%), Gaps = 40/312 (12%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E G  +  I++ S+        NSL +M+ DG+  R L P  D       FSP+  K+A
Sbjct: 28  AESGPGDLVIVYTSQV----AQVNSLHIMNADGSGERVLRP-PDPPAESAVFSPDGHKIA 82

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           Y       +              K +   +  +  +A  FS +GK             IY
Sbjct: 83  YIAGKPAQVFVTDSDLKSARPLTKAVAAESHINESVALAFSPDGKTVAYVESATGGSSIY 142

Query: 286 SVDLQSNATERLTNTLFINISA--------SYSPD--------------SSQIVFESDRE 323
            VD       +L      + +          ++PD                ++VF +  +
Sbjct: 143 VVDATGGEPRQLMAPFGASEAPVSVPPLRVVFTPDSRAVVYDRLAKADFGQRLVFATIAD 202

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPV---WSPQGDLIAF-TKFSGEKFAIGVMKKD 379
             +     +      + +   +E     P    +S  G  I +    S  + A+ V   +
Sbjct: 203 VVQGDKTDELTLPVPEGVIATREDFRGVPAQLGYSRDGKKIVYQLSVSRGRNALFVADAN 262

Query: 380 GSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP- 434
            +  R L +  + +A    PT+SP G  + ++          ++ ++ +G     ++ P 
Sbjct: 263 FTNPRKLADLKDPRAEWTLPTFSPDGTQIAYTDTLFDVGAQAIFVVNADGSGVRQVSKPQ 322

Query: 435 --AYASDPQWVG 444
              Y + P W  
Sbjct: 323 RGDYHTSPSWGY 334


>gi|257061597|ref|YP_003139485.1| pentapeptide repeat protein [Cyanothece sp. PCC 8802]
 gi|256591763|gb|ACV02650.1| pentapeptide repeat protein [Cyanothece sp. PCC 8802]
          Length = 1443

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 89/267 (33%), Gaps = 21/267 (7%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S+++ SG    ++ + D    N R      D  +    +S + Q +A  +YD      + 
Sbjct: 1090 SQTLASGSEDKTIKLWDVSTGNCRLTLTGHDASVSSLAWSGDSQTLASGSYDH----TIK 1145

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTN 299
            L D         +      + +  +S + +    S  +D+ + ++  D+ +      LT 
Sbjct: 1146 LWDVSTGLCRLTLTGHHGSVYSVAWSGDSQTLA-SGSEDKTIKLW--DVSTGNCRLTLTG 1202

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                  S ++S DS  +       G + + +   +  + +          +   WS    
Sbjct: 1203 HHGWVSSVAWSGDSQTLA----SGGDDTIKLWDVSTGNCRLTLTGHHGWVYSVAWSGDSQ 1258

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSK 417
             +A    SG    I +        RL +   +    +  WS   ++L        D   K
Sbjct: 1259 TLA----SGGDDTIKLWDVSTGNCRLTLTGHDDLVCSVAWSRDSQTLA---SGSSDKTIK 1311

Query: 418  LYSIDLNGRNETLINTPAYASDPQWVG 444
            L+ +       TL    A  S   W G
Sbjct: 1312 LWDVSTGECRLTLTGHDASVSSVAWSG 1338



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/327 (14%), Positives = 99/327 (30%), Gaps = 44/327 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G              +LWDV     +          S   +A               GD 
Sbjct: 1130 GDSQTLASGSYDHTIKLWDVSTG--LCRLTLTGHHGSVYSVA-------------WSGD- 1173

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                   S+++ SG    ++ + D    N R         +    +S + Q +A      
Sbjct: 1174 -------SQTLASGSEDKTIKLWDVSTGNCRLTLTGHHGWVSSVAWSGDSQTLA-----S 1221

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + L D         +      + +  +S + +        D+ + ++  D+ +  
Sbjct: 1222 GGDDTIKLWDVSTGNCRLTLTGHHGWVYSVAWSGDSQTLA--SGGDDTIKLW--DVSTGN 1277

Query: 294  TE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                LT    +  S ++S DS  +   S     + + +   +  + +      +AS    
Sbjct: 1278 CRLTLTGHDDLVCSVAWSRDSQTLASGSS---DKTIKLWDVSTGECRLTLTGHDASVSSV 1334

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKK 410
             WS     +A          I +      + RL +   +    +  WS   ++L  S  +
Sbjct: 1335 AWSGDSQTLASGSSDKT---IKLWDVSTGECRLTLTGHDDLVWSVAWSRDSQTLA-SCSR 1390

Query: 411  DGDTGSKLYSIDLNGRNETLINTPAYA 437
            DG    KL+ +      +T  N P + 
Sbjct: 1391 DGT--IKLWDVQTGKCLQTFDNHPYWG 1415



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 102/334 (30%), Gaps = 44/334 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ +  G  +  V  R+WD    K+++  +            H  S           GD 
Sbjct: 838  GQWLATGDRQGVV--RVWDAVTGKEVLTCR-----------GHHYSVWSV----AWSGD- 879

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                   S+++ S     ++ + D    N R         +    +S + Q +A  +YD 
Sbjct: 880  -------SQTLASSSDDKTIKLWDVSTGNCRLTLTGHHYSVSSVAWSGDSQALASCSYDK 932

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + L D         +    + + +  ++ N +    S   D  + ++  DL +  
Sbjct: 933  ----TIKLWDVSTGNCRLTLTGHDAWVSSVAWNGNSQTLA-SGSGDNTIKLW--DLSTGE 985

Query: 294  TE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                LT       S ++S DS  +   S     + + +   +    +             
Sbjct: 986  CHLTLTGHDDSVSSVAWSGDSQTLASCSY---DKTIKLWDVSTGLCRLTLTGHHGWVSSV 1042

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKK 410
             WS     +A          I +      Q RL +   +    +  WS   ++L      
Sbjct: 1043 AWSGDSQTLASGSSDKT---IKLWDVQTRQCRLTLTGHDDWVSSVAWSGDSQTLA---SG 1096

Query: 411  DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              D   KL+ +       TL    A  S   W G
Sbjct: 1097 SEDKTIKLWDVSTGNCRLTLTGHDASVSSLAWSG 1130



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 89/256 (34%), Gaps = 20/256 (7%)

Query: 193  LCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +D  GAN+      +    +    FSP+ Q +A  T D + ++RV+   T  +    
Sbjct: 807  LHQVDFTGANLTETRFANLLGGVLTLAFSPDGQWLA--TGDRQGVVRVWDAVTGKEVLTC 864

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYS 310
            R       + +  +S + +    S   D+ + ++  D+ +      LT   +   S ++S
Sbjct: 865  R--GHHYSVWSVAWSGDSQTLA-SSSDDKTIKLW--DVSTGNCRLTLTGHHYSVSSVAWS 919

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             DS  +   S     + + +   +  + +      +A      W+     +A        
Sbjct: 920  GDSQALASCSY---DKTIKLWDVSTGNCRLTLTGHDAWVSSVAWNGNSQTLASGSGDNT- 975

Query: 371  FAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              I +      +    L   D ++ +  WS   ++L        D   KL+ +       
Sbjct: 976  --IKLWDLSTGECHLTLTGHDDSVSSVAWSGDSQTLASCSY---DKTIKLWDVSTGLCRL 1030

Query: 429  TLINTPAYASDPQWVG 444
            TL     + S   W G
Sbjct: 1031 TLTGHHGWVSSVAWSG 1046


>gi|73670327|ref|YP_306342.1| WD-40 repeat-containing protein [Methanosarcina barkeri str. Fusaro]
 gi|72397489|gb|AAZ71762.1| WD-40 repeat-containing protein [Methanosarcina barkeri str. Fusaro]
          Length = 1229

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 53/323 (16%), Positives = 109/323 (33%), Gaps = 51/323 (15%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWD    KQI                      +Y  +    G          + V +  
Sbjct: 898  RLWDTDTGKQIFVLNHNGP--------------VYNVVFSPGG----------KYVATAS 933

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              N+  + + D     ++    +  ++   FSP+ + +A A+ DD       L DT   +
Sbjct: 934  KDNTARLWNADTGKQIFVLN-HNGRVYNAVFSPDGKYIATASGDD----TARLWDTDTGK 988

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                + N    +    FS +GK    +   D    ++  +  +     +       +SA 
Sbjct: 989  QIFVL-NHSGWVYDVVFSPDGKYIA-TASFDNTARLW--NAATGEQIFVLRHSDKVLSAV 1044

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPD   +   S+        +  ++   Q  +         + V+SP G  IA      
Sbjct: 1045 FSPDGKYVATASN---DNTARLWDADTGKQIFVLNHGSW-VNNVVFSPDGKYIATASNDN 1100

Query: 369  EKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                  +   D  ++  +L     +    +S  G+ +  +     D  ++L++ D  G+ 
Sbjct: 1101 TA---RLWDADTGKQIFVLNHSGWVNNVVFSRDGKYIATASY---DKTARLWNAD-TGKQ 1153

Query: 428  ETLINTPA------YASDPQWVG 444
              ++N         ++SD ++V 
Sbjct: 1154 VFVLNHNGPVYKVVFSSDGKYVA 1176



 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 60/341 (17%), Positives = 117/341 (34%), Gaps = 37/341 (10%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW---RK--IAHTISDD----IYQ 164
            G+ +           RLWD      I+      S  +    R      T SDD    ++ 
Sbjct: 806  GKYVATASGDNTA--RLWDTDTGNPILIMNHNGSVNNVVFSRDGKYIATASDDKTAGLWD 863

Query: 165  SITGEKGDFNSRILFVSES-----VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
                E  + N  +  V  S     V +    N+  + D D     ++    +  ++   F
Sbjct: 864  IAATEVLNHNGPVYGVVFSRDEKYVATASGDNTARLWDTDTGKQIFVLN-HNGPVYNVVF 922

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP  + VA A+ D  +  R++  DT        + N    +    FS +GK    +   D
Sbjct: 923  SPGGKYVATASKD--NTARLWNADTGKQIF---VLNHNGRVYNAVFSPDGKYIA-TASGD 976

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            +   ++  D  +     + N         +SPD   I   S         +  +   +Q 
Sbjct: 977  DTARLW--DTDTGKQIFVLNHSGWVYDVVFSPDGKYIATASF---DNTARLWNAATGEQI 1031

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWS 398
             + +  +      V+SP G  +A            +   D  ++  +L   S +    +S
Sbjct: 1032 FVLRHSD-KVLSAVFSPDGKYVATASNDNTA---RLWDADTGKQIFVLNHGSWVNNVVFS 1087

Query: 399  PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            P G+ +  +     D  ++L+  D  G+   ++N   + ++
Sbjct: 1088 PDGKYIATASN---DNTARLWDAD-TGKQIFVLNHSGWVNN 1124



 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 68/437 (15%), Positives = 137/437 (31%), Gaps = 81/437 (18%)

Query: 73   LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNS-LGAQVLV------TGRVIKEGKDRLR 125
            L  S   N +      +      +    + W++  G Q+ V         V+     +  
Sbjct: 586  LNHSGWVNNVVFSPDGKYAATASNDNTARLWDADTGKQIFVLNHGDWVNNVVFSPDGKYV 645

Query: 126  VEF------RLWDVKDRKQIIGKKFFSSPA------SWRKIAHTISDDIYQ--------- 164
                     RLWD    KQI       S          + IA   +D+  +         
Sbjct: 646  ATASNDNTARLWDADTGKQIFVLNHNGSVNNAVFSPDGKYIATASNDNTARLWNADTGKQ 705

Query: 165  -SITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
              +    G  N+ +     + + +    N+  + D D     ++      +     FSP+
Sbjct: 706  IFVLNHNGSVNNAVFSPDGKYIATASNDNTAGLWDADTGKQIFVLNHGSWVNNV-VFSPD 764

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             + +A A++D+       L D     +   + N  S +    FS +GK    +   D   
Sbjct: 765  GKYIATASFDN----TARLWDIATGNSIFAL-NHDSWVYDVMFSPDGKYVA-TASGDNTA 818

Query: 283  DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--REGKEQL------------ 328
             ++  D  +     + N      +  +S D   I   SD    G   +            
Sbjct: 819  RLW--DTDTGNPILIMNHNGSVNNVVFSRDGKYIATASDDKTAGLWDIAATEVLNHNGPV 876

Query: 329  ----------YVMQSNGSDQKRISQ----------DKEASYFDPVWSPQGDLIAFTKFSG 368
                      YV  ++G +  R+            +     ++ V+SP G  +A      
Sbjct: 877  YGVVFSRDEKYVATASGDNTARLWDTDTGKQIFVLNHNGPVYNVVFSPGGKYVATASKDN 936

Query: 369  EKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                  +   D  ++  +L  +  +    +SP G+ +  +    GD  ++L+  D  G+ 
Sbjct: 937  TA---RLWNADTGKQIFVLNHNGRVYNAVFSPDGKYIATAS---GDDTARLWDTD-TGKQ 989

Query: 428  ETLINTPAYASDPQWVG 444
              ++N   +  D  +  
Sbjct: 990  IFVLNHSGWVYDVVFSP 1006



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 94/260 (36%), Gaps = 21/260 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +    N+  + D D     ++      +     FSP+ +  A A+ D  +  R++  DT 
Sbjct: 565 TASNDNTARLWDADTGKQIFVLNHSGWVNNV-VFSPDGKYAATASND--NTARLWDADTG 621

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  + N    +    FS +GK    +   D    ++  D  +     + N      
Sbjct: 622 KQIF---VLNHGDWVNNVVFSPDGKYVA-TASNDNTARLW--DADTGKQIFVLNHNGSVN 675

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A +SPD   I   S+        +  ++   Q  +  +   S  + V+SP G  IA   
Sbjct: 676 NAVFSPDGKYIATASN---DNTARLWNADTGKQIFVL-NHNGSVNNAVFSPDGKYIATAS 731

Query: 366 FSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                   G+   D  ++  +L   S +    +SP G+ +  +     D  ++L+ I   
Sbjct: 732 NDNTA---GLWDADTGKQIFVLNHGSWVNNVVFSPDGKYIATAS---FDNTARLWDI-AT 784

Query: 425 GRNETLINTPAYASDPQWVG 444
           G +   +N  ++  D  +  
Sbjct: 785 GNSIFALNHDSWVYDVMFSP 804



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 91/243 (37%), Gaps = 20/243 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +  + +  +    FSP+ +  A A+ D  +  R++  DT        + N    +  
Sbjct: 540 HRVVVLNHNGWVNNVVFSPDGKYAATASND--NTARLWDADTGKQIF---VLNHSGWVNN 594

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             FS +GK A  +   D    ++  D  +     + N      +  +SPD   +   S+ 
Sbjct: 595 VVFSPDGKYAA-TASNDNTARLW--DADTGKQIFVLNHGDWVNNVVFSPDGKYVATASN- 650

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                  +  ++   Q  +  +   S  + V+SP G  IA            +   D  +
Sbjct: 651 --DNTARLWDADTGKQIFVL-NHNGSVNNAVFSPDGKYIATASNDNTA---RLWNADTGK 704

Query: 383 ER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +  +L  + ++    +SP G+ +  +     D  + L+  D  G+   ++N  ++ ++  
Sbjct: 705 QIFVLNHNGSVNNAVFSPDGKYIATASN---DNTAGLWDAD-TGKQIFVLNHGSWVNNVV 760

Query: 442 WVG 444
           +  
Sbjct: 761 FSP 763



 Score = 93.5 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 77/217 (35%), Gaps = 21/217 (9%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D  ++   +         + N    +    FS +GK A  +   D    ++  D  +   
Sbjct: 526 DADKLIRQELLSIPHRVVVLNHNGWVNNVVFSPDGKYAA-TASNDNTARLW--DADTGKQ 582

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             + N      +  +SPD       S+        +  ++   Q  +    +    + V+
Sbjct: 583 IFVLNHSGWVNNVVFSPDGKYAATASN---DNTARLWDADTGKQIFVLNHGDW-VNNVVF 638

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKK--- 410
           SP G  +A            +   D  ++  +L  + ++    +SP G+ +  +      
Sbjct: 639 SPDGKYVATASNDNTA---RLWDADTGKQIFVLNHNGSVNNAVFSPDGKYIATASNDNTA 695

Query: 411 ---DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              + DTG +++ ++ NG     +N   ++ D +++ 
Sbjct: 696 RLWNADTGKQIFVLNHNGS----VNNAVFSPDGKYIA 728



 Score = 91.6 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 104/309 (33%), Gaps = 47/309 (15%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLW+    KQI                      +Y ++    G +         +  SG 
Sbjct: 939  RLWNADTGKQIFVLNHNG--------------RVYNAVFSPDGKY--------IATASGD 976

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                L   D      +    +    +++  FSP+ + +A A++D  +  R++   T    
Sbjct: 977  DTARLWDTD---TGKQIFVLNHSGWVYDVVFSPDGKYIATASFD--NTARLWNAATGEQI 1031

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
               R       +L+  FS +GK    +   D    ++  D  +     + N      +  
Sbjct: 1032 FVLR---HSDKVLSAVFSPDGKYVA-TASNDNTARLW--DADTGKQIFVLNHGSWVNNVV 1085

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPD   I   S+        +  ++   Q  +  +      + V+S  G  IA   +  
Sbjct: 1086 FSPDGKYIATASN---DNTARLWDADTGKQIFVL-NHSGWVNNVVFSRDGKYIATASYDK 1141

Query: 369  EKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                  +   D  ++  +L  +  +    +S  G+ +  +     D  ++L+   ++ + 
Sbjct: 1142 TA---RLWNADTGKQVFVLNHNGPVYKVVFSSDGKYVATASD---DNKARLW---IHNKT 1192

Query: 428  ETLINTPAY 436
            E LI+    
Sbjct: 1193 EDLIHEAGN 1201



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 78/256 (30%), Gaps = 54/256 (21%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ I           RLWD    KQI                      +Y  +    G  
Sbjct: 967  GKYIATASGDDTA--RLWDTDTGKQIFVLNHSG--------------WVYDVVFSPDG-- 1008

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    + + +    N+  + +       ++    D++L    FSP+ + VA A+ D 
Sbjct: 1009 --------KYIATASFDNTARLWNAATGEQIFVLRHSDKVLSA-VFSPDGKYVATASND- 1058

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
             +  R++  DT        + N  S +    FS +GK    +   D    ++  D  +  
Sbjct: 1059 -NTARLWDADTGKQIF---VLNHGSWVNNVVFSPDGKYIA-TASNDNTARLW--DADTGK 1111

Query: 294  TERLTNTLFINISASYSPDSS-------------------QIVFESDREGKEQLYVMQSN 334
               + N      +  +S D                     + VF  +  G     V  S+
Sbjct: 1112 QIFVLNHSGWVNNVVFSRDGKYIATASYDKTARLWNADTGKQVFVLNHNGPVYKVVFSSD 1171

Query: 335  GSDQKRISQDKEASYF 350
            G      S D +A  +
Sbjct: 1172 GKYVATASDDNKARLW 1187


>gi|317475671|ref|ZP_07934931.1| hypothetical protein HMPREF1016_01913 [Bacteroides eggerthii
           1_2_48FAA]
 gi|316908127|gb|EFV29821.1| hypothetical protein HMPREF1016_01913 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 1086

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 75/222 (33%), Gaps = 38/222 (17%)

Query: 253 IGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +  F S   AP +      S +G     + + D    IY+V +      +LT     +  
Sbjct: 13  LAAFTSAQDAPLWLRHCAISPDGTTIAFTYKGD----IYTVPVDGGRAMQLTTNPAHDTE 68

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPD  +I F SDR G   +Y++   G + +R++     S     +S  G  I F+  
Sbjct: 69  PVWSPDGKRIAFASDRMGSMDVYIVSKEGGEPRRLTT-HSGSETPVAFSDAG-HILFSAD 126

Query: 367 -----------SGEKFA-IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---------I 405
                      S  +F  +  +  +G +  +L     ++  + +  G  L          
Sbjct: 127 IMPSAETVLFPSNGQFRQVYKVSVEGGRP-VLYSPMPMECISINKEGTVLYQDKKGYEDY 185

Query: 406 FSRKKDGDTGSKLYSIDLNGRN---ETLINTPAYASDPQWVG 444
           + + +       ++     G       L        +P W  
Sbjct: 186 WRKHQVSPIARDIWMY-APGEKPAYRQLTTFGGEDREPVWAP 226



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 80/221 (36%), Gaps = 31/221 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V +   R      ++    +    P +S +GKR   +  
Sbjct: 30  AISPDGTTIAFTY--KGDIYTVPVDGGRAM----QLTTNPAHDTEPVWSPDGKRIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +  +MD+Y V  +     RLT         ++S D+  I+F +D     +  +  SNG  
Sbjct: 84  RMGSMDVYIVSKEGGEPRRLTTHSGSETPVAFS-DAGHILFSADIMPSAETVLFPSNG-Q 141

Query: 338 QKRISQDKEASYFDPVWSP----------QGDLIAFTKFSGEKF-----------AIGVM 376
            +++ +         ++SP          +G ++   K   E +            I + 
Sbjct: 142 FRQVYKVSVEGGRPVLYSPMPMECISINKEGTVLYQDKKGYEDYWRKHQVSPIARDIWMY 201

Query: 377 KKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                    +L       + P W+P G+S  +  +++G   
Sbjct: 202 APGEKPAYRQLTTFGGEDREPVWAPDGKSFYYLSEENGTFN 242



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 111/302 (36%), Gaps = 40/302 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ E G FN            G    +  V       +R+L+ + D  L    +  +
Sbjct: 231 FYYLSEENGTFN------VYRRTPGAASAT-QVTHHTKQPVRFLSIAADGRLC---YGFD 280

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +        +   + + ++  + D+   R             S NGK     ++ D   
Sbjct: 281 GEIYTLVPGGEPRKVNISIVSDKSDKDLIRQIKSSGATEM-ALSPNGKEVAFVLRGD--- 336

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   +    T+++TNT        ++PD   +V+ S+R G  QLY       D+K  +
Sbjct: 337 -VYVTSVDYKTTKQVTNTPCQERGVDFAPDGRSLVYASERGGLWQLYTSAIVRKDEKLFT 395

Query: 343 Q----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---- 388
                      + +A+ F P +SP G  +AF +      AI V+       R +++    
Sbjct: 396 YATELKEERLTNSDAASFQPQYSPDGKEVAFLENRA---AIRVINLKTKAVRTVMDAKYQ 452

Query: 389 ---DSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP--Q 441
                  Q   WSP  + ++  F     G     +  ++ +G+ E +  T +  +D   +
Sbjct: 453 YSYSDGDQWFRWSPDSKWILSDFI-GIGGWNNKDVVLLNADGKGEMVNLTESGYTDGNAK 511

Query: 442 WV 443
           WV
Sbjct: 512 WV 513



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 88/250 (35%), Gaps = 30/250 (12%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V  G  +     +  D ++   +   +     E   SPN ++VA+    D     VY+  
Sbjct: 287 VPGGEPRKVNISIVSDKSDKDLIRQIKSSGATEMALSPNGKEVAFVLRGD-----VYVTS 341

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN----------- 292
               +  K++ N         F+ +G+  + + ++     +Y+  +              
Sbjct: 342 VDY-KTTKQVTNTPCQERGVDFAPDGRSLVYASERGGLWQLYTSAIVRKDEKLFTYATEL 400

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-- 350
             ERLTN+   +    YSPD  ++ F  +R     + V+       + +   K    +  
Sbjct: 401 KEERLTNSDAASFQPQYSPDGKEVAFLENRA---AIRVINLKTKAVRTVMDAKYQYSYSD 457

Query: 351 ---DPVWSPQGDLIA--FTKFSG-EKFAIGVMKKDGSQERL-LVEDSNLQAPT-WSPSGR 402
                 WSP    I   F    G     + ++  DG  E + L E         W   G+
Sbjct: 458 GDQWFRWSPDSKWILSDFIGIGGWNNKDVVLLNADGKGEMVNLTESGYTDGNAKWVLGGK 517

Query: 403 SLIFSRKKDG 412
           ++I++  + G
Sbjct: 518 AMIWTSDRAG 527



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 90/247 (36%), Gaps = 31/247 (12%)

Query: 222 NQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              +  +  +    I R +++       A +++  F      P ++ +GK      +++ 
Sbjct: 180 KGYEDYWRKHQVSPIARDIWMYAPGEKPAYRQLTTFGGEDREPVWAPDGKSFYYLSEENG 239

Query: 281 AMDIYSVDLQSNATERLTNTL---------FINISASYSPDSSQIVFESDREGKEQ---L 328
             ++Y     + +  ++T+             +    Y  D    ++     G+ +   +
Sbjct: 240 TFNVYRRTPGAASATQVTHHTKQPVRFLSIAADGRLCYGFDGE--IYTLVPGGEPRKVNI 297

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            ++  + SD+  I Q K +   +   SP G  +AF         + V   D    + +  
Sbjct: 298 SIVS-DKSDKDLIRQIKSSGATEMALSPNGKEVAFVLRGD----VYVTSVDYKTTKQVTN 352

Query: 389 DS-NLQAPTWSPSGRSLIFSRKKDG----------DTGSKLYSIDLNGRNETLINTPAYA 437
                +   ++P GRSL+++ ++ G              KL++     + E L N+ A +
Sbjct: 353 TPCQERGVDFAPDGRSLVYASERGGLWQLYTSAIVRKDEKLFTYATELKEERLTNSDAAS 412

Query: 438 SDPQWVG 444
             PQ+  
Sbjct: 413 FQPQYSP 419


>gi|281419894|ref|ZP_06250893.1| MdsD protein [Prevotella copri DSM 18205]
 gi|281406021|gb|EFB36701.1| MdsD protein [Prevotella copri DSM 18205]
          Length = 1077

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 67/200 (33%), Gaps = 28/200 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G     + + D    +YSV +      +LT     +    +SPDS +I F+S+R
Sbjct: 29  PAISPDGTTIAFAYKGD----LYSVSVNGGEARQLTTHAAFDSHPVWSPDSKKIAFQSNR 84

Query: 323 EGKEQLYVMQSNGSDQKRISQ-----------DKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           EG   ++V+ + G    R++            D +   +     P    I F        
Sbjct: 85  EGSLDIFVIDAKGGAPTRLTTNSGSETPIAFADNDHVLYSASLQPTAQSIIFG--DNTFP 142

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLYSID 422
            +  +   G +   L     ++  + + +G  L          + + +       ++   
Sbjct: 143 QVYKVSTKGGRPE-LFSTLTMENISIAKNGDILYHDKKGYEDPWRKHQKSPIARDIWLKS 201

Query: 423 LNGRNETLINTPAYASDPQW 442
            NG+             P W
Sbjct: 202 -NGKFAKQTTFAGEDRSPVW 220



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 110/269 (40%), Gaps = 32/269 (11%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +    G  +R+LT S   +L    +  + +   Y   +  +  +V +  T  + AP  + 
Sbjct: 252 ITHHKGNPVRFLTASSTDLLC---YGYDGE--IYTVKEGGEPQKVNISITTDNDAPSLVR 306

Query: 255 NFRSM-ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             +S        S + K     +  D    +Y   ++   T+R+T+T       S+SPD 
Sbjct: 307 QIKSWGATEISVSPDAKEVAFVMHGD----VYVTSVEYTTTKRITDTPQQERDLSFSPDG 362

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----------ASYFDPVWSPQGDLIAF 363
             +V+ ++R G  Q+Y  +     +K  +   +           +   P +SP G  +AF
Sbjct: 363 RALVYAAERNGVWQIYQSKIKNEKEKNFTYATDIEEEQLVKTGITSQYPQYSPDGKEVAF 422

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGDTGS 416
            +   ++ A+ ++     + R +++   + + +       WSP  + L+ +   +G   +
Sbjct: 423 FE---DRAALRIVNLKSKEIRTVLDGKYVYSYSDGDIGFEWSPDSKWLLSTYIGNGGWNN 479

Query: 417 K-LYSIDLNGRNETLINTPAYA-SDPQWV 443
           + +  +  +G+    +    Y+ S+ +WV
Sbjct: 480 QDIALVKADGKEVHNLTNSGYSDSNGKWV 508



 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 87/247 (35%), Gaps = 39/247 (15%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +  P  SP+   +A+A     D+  V +         +++    +    P +S + 
Sbjct: 22  HPLWMRYPAISPDGTTIAFAY--KGDLYSVSVN----GGEARQLTTHAAFDSHPVWSPDS 75

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI------------SASYSPDSSQIV 317
           K+      ++ ++DI+ +D +  A  RLT                   SAS  P +  I+
Sbjct: 76  KKIAFQSNREGSLDIFVIDAKGGAPTRLTTNSGSETPIAFADNDHVLYSASLQPTAQSII 135

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------- 370
           F        Q+Y + + G   +  S     +  +   +  GD I +    G +       
Sbjct: 136 F--GDNTFPQVYKVSTKGGRPELFSTL---TMENISIAKNGD-ILYHDKKGYEDPWRKHQ 189

Query: 371 -----FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                  I + K +G   +        ++P W+   +S  +  ++DG     +Y   LN 
Sbjct: 190 KSPIARDIWL-KSNGKFAKQTTFAGEDRSPVWTSDEKSFFYLSEQDGTF--NIYRRSLNS 246

Query: 426 RNETLIN 432
            ++  I 
Sbjct: 247 SSDKQIT 253



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 90/258 (34%), Gaps = 39/258 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMD-------TRIDRAPKRIGNFRSMILAPRFSSNGK 270
             + N   + +     ED  R +           + +    +   F     +P ++S+ K
Sbjct: 166 SIAKNGDILYHDKKGYEDPWRKHQKSPIARDIWLKSNGKFAKQTTFAGEDRSPVWTSDEK 225

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---------SYSPDSSQIVFESD 321
                 ++D   +IY   L S++ +++T+     +            Y  D    ++   
Sbjct: 226 SFFYLSEQDGTFNIYRRSLNSSSDKQITHHKGNPVRFLTASSTDLLCYGYDGE--IYTVK 283

Query: 322 REGKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             G+ Q   +   ++      + Q K     +   SP    +AF         + V   +
Sbjct: 284 EGGEPQKVNISITTDNDAPSLVRQIKSWGATEISVSPDAKEVAFVMHGD----VYVTSVE 339

Query: 380 GSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLY------------SIDLNGR 426
            +  + + +    +   ++SP GR+L+++ +++G    ++Y            +   +  
Sbjct: 340 YTTTKRITDTPQQERDLSFSPDGRALVYAAERNG--VWQIYQSKIKNEKEKNFTYATDIE 397

Query: 427 NETLINTPAYASDPQWVG 444
            E L+ T   +  PQ+  
Sbjct: 398 EEQLVKTGITSQYPQYSP 415



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 8/115 (6%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            P++SP+ ++VA+  ++D   LR+  +   + R     K + ++    +   +S + K  
Sbjct: 410 YPQYSPDGKEVAF--FEDRAALRIVNLKSKEIRTVLDGKYVYSYSDGDIGFEWSPDSKWL 467

Query: 273 LISVQKDE---AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           L +   +      DI  V         LTN+ + + +  +  D   ++F+SDR G
Sbjct: 468 LSTYIGNGGWNNQDIALVKADGKEVHNLTNSGYSDSNGKWVLDGKAMLFQSDRAG 522



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 7/54 (12%)

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           ++ P  SP G ++ F+ K        LYS+ +NG     + T  A+ S P W  
Sbjct: 26  MRYPAISPDGTTIAFAYK------GDLYSVSVNGGEARQLTTHAAFDSHPVWSP 73


>gi|160891274|ref|ZP_02072277.1| hypothetical protein BACUNI_03723 [Bacteroides uniformis ATCC 8492]
 gi|317481149|ref|ZP_07940224.1| hypothetical protein HMPREF1007_03343 [Bacteroides sp. 4_1_36]
 gi|156859495|gb|EDO52926.1| hypothetical protein BACUNI_03723 [Bacteroides uniformis ATCC 8492]
 gi|316902645|gb|EFV24524.1| hypothetical protein HMPREF1007_03343 [Bacteroides sp. 4_1_36]
          Length = 1090

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 70/220 (31%), Gaps = 34/220 (15%)

Query: 253 IGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +         P +      S +G       + D    IY V  +     +LT       +
Sbjct: 12  LTAIAGHAATPLWMRDVQISPDGTEIAFCYKGD----IYKVPAKGGTATQLTTQESYECT 67

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPD  QI F SDR G   ++VM ++G   +R++           ++P G  I F+  
Sbjct: 68  PIWSPDGKQIAFASDRYGNFDVFVMPADGGTAQRLTTHSTGE-IPSTFTPDGKYILFSAS 126

Query: 367 -----------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD---- 411
                      +     +  +   G +   ++     +A  +  +G   ++  +K     
Sbjct: 127 IQDPASSALFPTSAMTELYKVPATGGRTEQVLGTP-AEAVCFDKAGHQFLYQDRKGFEDE 185

Query: 412 ------GDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                       ++  D   G +  L +      +P    
Sbjct: 186 WRKHHTSSITRDIWLYDAKTGIHTNLTDRAGEDRNPVLSP 225



 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 76/221 (34%), Gaps = 35/221 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+  ++A+      DI +V            ++    S    P +S +GK+   +  +
Sbjct: 30  ISPDGTEIAFCY--KGDIYKV----PAKGGTATQLTTQESYECTPIWSPDGKQIAFASDR 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKEQ 327
               D++ +       +RLT      I ++++PD   I+F +                 +
Sbjct: 84  YGNFDVFVMPADGGTAQRLTTHSTGEIPSTFTPDGKYILFSASIQDPASSALFPTSAMTE 143

Query: 328 LYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIG 374
           LY + + G   +++     EA  FD      G    +               S     I 
Sbjct: 144 LYKVPATGGRTEQVLGTPAEAVCFDKA----GHQFLYQDRKGFEDEWRKHHTSSITRDIW 199

Query: 375 VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDT 414
           +          L +     + P  SP GR++ F  +++G +
Sbjct: 200 LYDAKTGIHTNLTDRAGEDRNPVLSPDGRTVYFLSERNGGS 240



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 103/323 (31%), Gaps = 81/323 (25%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +  I   + + D     I      R      P  SP+ + V + +  +     VY     
Sbjct: 191 TSSITRDIWLYDAK-TGIHTNLTDRAGEDRNPVLSPDGRTVYFLSERNGGSFNVYAFPLA 249

Query: 246 IDRAPKRIGNFRSM---------------------------------------------- 259
             R  K I +F++                                               
Sbjct: 250 QPREVKPITSFKTHPVRFLSMSDGETLCYSYDGEIYTQQPDATPKKVAIELVRDDRPQFA 309

Query: 260 -------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                    +   S +GK+   +++     +++        T+++T+T       S++ D
Sbjct: 310 NLQSSDGATSAVVSPDGKQIAFTLRG----EVFVTSADYATTKQVTHTPAREAGLSFATD 365

Query: 313 SSQIVFESDREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +  + + S+R G  QLY+             +   +++ +          P +SP G  +
Sbjct: 366 NRTLAYASERGGNWQLYLAKIARKEDPNFPNATLIEEEVLLPSTTVERAYPQFSPDGKEL 425

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFSRKKDGD 413
           AF +   ++  + V+  +  + R + + S   +        WSP G+   L F+  K  D
Sbjct: 426 AFIE---DRIRLMVLNLETKKVRQITDGSTWYSTGGGFDYAWSPDGKWFTLEFTGNKH-D 481

Query: 414 TGSKLYSIDLNGRNETLINTPAY 436
             S +  +   G  + +  T + 
Sbjct: 482 PYSDIGLVSAEGGKDIINLTNSG 504



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 82/232 (35%), Gaps = 30/232 (12%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             ++              SP+ +++A+    +        + +      K++ +  +   
Sbjct: 305 RPQFANLQSSDGATSAVVSPDGKQIAFTLRGE------VFVTSADYATTKQVTHTPAREA 358

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS------------ASY 309
              F+++ +    + ++     +Y   +         N   I                 +
Sbjct: 359 GLSFATDNRTLAYASERGGNWQLYLAKIARKEDPNFPNATLIEEEVLLPSTTVERAYPQF 418

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDL--IAF 363
           SPD  ++ F  DR    +L V+       ++I+           FD  WSP G    + F
Sbjct: 419 SPDGKELAFIEDRI---RLMVLNLETKKVRQITDGSTWYSTGGGFDYAWSPDGKWFTLEF 475

Query: 364 TKFSGEKF-AIGVMKKDGSQERL-LVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
           T    + +  IG++  +G ++ + L     +   P ++  G +++F+ ++ G
Sbjct: 476 TGNKHDPYSDIGLVSAEGGKDIINLTNSGYMSGYPHFALDGNAILFTTERYG 527



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/357 (13%), Positives = 113/357 (31%), Gaps = 100/357 (28%)

Query: 166 ITGEKGDFNSRILFVSESVVSGI------IKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           +T   G   + +      +           K  +  +   G     LT  ++     P +
Sbjct: 12  LTAIAGHAATPLWMRDVQISPDGTEIAFCYKGDIYKVPAKGGTATQLTT-QESYECTPIW 70

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +++A+A+    +   V++M        +R+    +  +   F+ +GK  L S    
Sbjct: 71  SPDGKQIAFASDRYGN-FDVFVMPAD-GGTAQRLTTHSTGEIPSTFTPDGKYILFSASIQ 128

Query: 280 E-----------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---- 324
           +             ++Y V      TE++  T    +   +     Q +++ DR+G    
Sbjct: 129 DPASSALFPTSAMTELYKVPATGGRTEQVLGTPAEAV--CFDKAGHQFLYQ-DRKGFEDE 185

Query: 325 ---------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFA-- 372
                       +++  +       ++ D+     +PV SP G  + F ++ +G  F   
Sbjct: 186 WRKHHTSSITRDIWLYDAKTGIHTNLT-DRAGEDRNPVLSPDGRTVYFLSERNGGSFNVY 244

Query: 373 ---------------------------------------IGVMKKDGSQERLLVEDSNLQ 393
                                                  I   + D + +++ +E     
Sbjct: 245 AFPLAQPREVKPITSFKTHPVRFLSMSDGETLCYSYDGEIYTQQPDATPKKVAIELVRDD 304

Query: 394 APTW--------------SPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPA 435
            P +              SP G+ + F+ +       +++    +    + + +TPA
Sbjct: 305 RPQFANLQSSDGATSAVVSPDGKQIAFTLR------GEVFVTSADYATTKQVTHTPA 355



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 93/243 (38%), Gaps = 31/243 (12%)

Query: 95  DSIPRFQDWNSL-GAQVLVTGRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
           D  P+F +  S  GA   V   V  +GK     +   ++ V        K+   +PA  R
Sbjct: 303 DDRPQFANLQSSDGATSAV---VSPDGKQIAFTLRGEVF-VTSADYATTKQVTHTPA--R 356

Query: 153 KIAHTIS--DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           +   + +  +      +   G++   +  ++          +L            L PS 
Sbjct: 357 EAGLSFATDNRTLAYASERGGNWQLYLAKIARKEDPNFPNATLI-------EEEVLLPST 409

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRF 265
                 P+FSP+ +++A+     ED +R+ +++    +  ++I +              +
Sbjct: 410 TVERAYPQFSPDGKELAFI----EDRIRLMVLNLET-KKVRQITDGSTWYSTGGGFDYAW 464

Query: 266 SSNGKR--ALISVQK-DEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESD 321
           S +GK      +  K D   DI  V  +       LTN+ +++    ++ D + I+F ++
Sbjct: 465 SPDGKWFTLEFTGNKHDPYSDIGLVSAEGGKDIINLTNSGYMSGYPHFALDGNAILFTTE 524

Query: 322 REG 324
           R G
Sbjct: 525 RYG 527


>gi|125543618|gb|EAY89757.1| hypothetical protein OsI_11300 [Oryza sativa Indica Group]
          Length = 737

 Score =  108 bits (271), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 53/294 (18%), Positives = 108/294 (36%), Gaps = 69/294 (23%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI- 274
            P FS +  ++A+   + + +        R+        +    + +P ++S      + 
Sbjct: 403 FPTFSKDGSQLAFVDNEFKSVWLADSQGMRVVFK----TDGPDSVFSPLWNSKKDILYVC 458

Query: 275 ---SVQKDEAMDIYSV-DLQSN--ATERLTNTLFINISASYSPDSSQIVFESDREGK--- 325
              S +  E ++I+S+ ++ +    + +LT   F N   S +PD ++ VF S R+G    
Sbjct: 459 MGPSFKASETLEIHSIHNVSTGDRKSRQLTFGGFNNAFPSTNPDGTKFVFRSTRDGGAKY 518

Query: 326 -EQLYVM-QSNGSD--------QKRISQDKEASYFDPVWSPQGDLIAFTKFSG------- 368
            + LY+M  ++  +          R++   E +     WSP G  I F+           
Sbjct: 519 SKNLYIMEDADAGEGEDGSQSTVTRMT-AGEWTDTHCQWSPNGKWIVFSSNRDRPADAPE 577

Query: 369 -------EKFAIGVMK-KDGSQERLLVED----SNLQAPTWSPSGRSLIFSRK------- 409
                    FA+ +M     S  R++        ++  P +SP GRS+  +         
Sbjct: 578 RDHGLDPGYFAVYLMDVASRSVVRVIRSGYDVAGHVNHPVFSPDGRSIAVTSDLAAVTAD 637

Query: 410 --------KDGDTGSKLYSIDLN----GRNE------TLINTPAYASDPQWVGF 445
                           ++++D++     RNE       + ++    S P W  F
Sbjct: 638 PMSLPLFLHSVRPYGDIFTVDIDPDDMARNEDVEGFVRVTHSRYENSTPAWTVF 691



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 16/124 (12%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---------KEQ 327
           ++      Y  +L++  TERLT     +IS S SP   ++   S +              
Sbjct: 168 RRSPWNVAYKTNLRTGETERLTPPGTFDISPSVSPSGKKVAVASYQGKKWDGEIKNLNTN 227

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQE 383
           +YVM      Q R    +   +  P W  + D+I F +  G      + +        + 
Sbjct: 228 IYVMSLENPSQDRERVIENGGW--PSWGSE-DVIFFHRKDGGGENSCWGVFRHTLSTGET 284

Query: 384 RLLV 387
             + 
Sbjct: 285 VRVT 288



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 31/89 (34%), Gaps = 13/89 (14%)

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-------GSK 417
           + S    A     + G  ERL    +   +P+ SPSG+ +  +  +            + 
Sbjct: 168 RRSPWNVAYKTNLRTGETERLTPPGTFDISPSVSPSGKKVAVASYQGKKWDGEIKNLNTN 227

Query: 418 LYSIDLNG---RNETLINTPAYASDPQWV 443
           +Y + L       E +I    +   P W 
Sbjct: 228 IYVMSLENPSQDRERVIENGGW---PSWG 253



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 46/153 (30%), Gaps = 25/153 (16%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------KDEAM 282
           +      V           +R+    +  ++P  S +GK+  ++           K+   
Sbjct: 167 ERRSPWNVAYKTNLRTGETERLTPPGTFDISPSVSPSGKKVAVASYQGKKWDGEIKNLNT 226

Query: 283 DIYSVDLQ--SNATERLTNTLFINISASYSPDSSQIV--FESDREGKEQ----LYVMQSN 334
           +IY + L+  S   ER+          S+    S+ V  F     G E     ++    +
Sbjct: 227 NIYVMSLENPSQDRERVIENGGW---PSW---GSEDVIFFHRKDGGGENSCWGVFRHTLS 280

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +  R++     +            +A     
Sbjct: 281 TGETVRVTPAAFDAVTPAAI--DETRVAVAAIR 311


>gi|268317952|ref|YP_003291671.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Rhodothermus marinus DSM 4252]
 gi|262335486|gb|ACY49283.1| peptidase S9B dipeptidylpeptidase IV domain protein [Rhodothermus
           marinus DSM 4252]
          Length = 1078

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 52/276 (18%), Positives = 98/276 (35%), Gaps = 35/276 (12%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQQKV 226
            RI F++    +G+    L   + DG  +R L   +    FE          +SP+ + +
Sbjct: 307 DRIAFITTR--NGLFDVYLASAN-DGKILRRLVAGQTSPDFESLRILTPGLTWSPDGRFL 363

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A A         + +++       +        IL+  +S +G+R   +  +    DIY 
Sbjct: 364 ALA-VKSGPTDAIAVINVETGAHVRYRIPDVEQILSLAWSPDGRRIAFAGTQRAQSDIYV 422

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKEQ-------------- 327
           +DL++  T   TN  F +   ++ PD   +VF SDR      G+ Q              
Sbjct: 423 LDLRTGETINYTNDAFSDHEPAWRPDGRALVFHSDRGPYVEPGRYQAGQFDLTARLSRGY 482

Query: 328 -LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            LY++  +    +R++  +        +    D + F         +         ER L
Sbjct: 483 DLYLLHLDPVRIERLTTTEPWDDRSGRFGSDPDRLLFISDRNGIPNLYEKDLRTGAERPL 542

Query: 387 VEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +    +Q  + S  G        ++G     +Y I
Sbjct: 543 TDVVMGIQQVSLSADGHRAAVVSLREG--VPSIYLI 576



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 75/269 (27%), Gaps = 49/269 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+    +++ Y      +          I R      N      +P  S  G R      
Sbjct: 261 RWHKALREIYYPELTARE------QLDDIGRPLLTARNAGYYNTSPALSPQGDRIAFITT 314

Query: 278 KDEAMDIYSVDL-QSNATERLTNTLFINISA------------SYSPDSSQIVFESDREG 324
           ++   D+Y           RL        S             ++SPD   +        
Sbjct: 315 RNGLFDVYLASANDGKILRRLVAG---QTSPDFESLRILTPGLTWSPDGRFLALAVKSGP 371

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + V+        R             WSP G  IAF      +  I V+     +  
Sbjct: 372 TDAIAVINVETGAHVRYRIPDVEQILSLAWSPDGRRIAFAGTQRAQSDIYVLDLRTGETI 431

Query: 385 LLVED-SNLQAPTWSPSGRSLIFSRKKDG------------------DTGSKLYSIDLNG 425
               D  +   P W P GR+L+F   +                      G  LY + L+ 
Sbjct: 432 NYTNDAFSDHEPAWRPDGRALVFHSDRGPYVEPGRYQAGQFDLTARLSRGYDLYLLHLDP 491

Query: 426 -RNETLINT-------PAYASDPQWVGFM 446
            R E L  T         + SDP  + F+
Sbjct: 492 VRIERLTTTEPWDDRSGRFGSDPDRLLFI 520



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 55/270 (20%), Positives = 95/270 (35%), Gaps = 32/270 (11%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ-SITGEKGDFNSRILFVSESVVSGI 188
           L+DV       GK         R +A   S D     I      ++    F++ +V SG 
Sbjct: 318 LFDVYLASANDGKILR------RLVAGQTSPDFESLRILTPGLTWSPDGRFLALAVKSGP 371

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                 +    GA++RY  P  +QIL    +SP+ +++A+A         +Y++D R   
Sbjct: 372 TDAIAVINVETGAHVRYRIPDVEQILSL-AWSPDGRRIAFAG-TQRAQSDIYVLDLRTGE 429

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKD--------------------EAMDIYSVD 288
                 N       P +  +G+  +    +                        D+Y + 
Sbjct: 430 TIN-YTNDAFSDHEPAWRPDGRALVFHSDRGPYVEPGRYQAGQFDLTARLSRGYDLYLLH 488

Query: 289 LQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           L     ERLT T  + + S  +  D  +++F SDR G   LY        ++ ++ D   
Sbjct: 489 LDPVRIERLTTTEPWDDRSGRFGSDPDRLLFISDRNGIPNLYEKDLRTGAERPLT-DVVM 547

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                  S  G   A         +I ++K
Sbjct: 548 GIQQVSLSADGHRAAVVSLREGVPSIYLIK 577


>gi|327402631|ref|YP_004343469.1| peptidase S41 [Fluviicola taffensis DSM 16823]
 gi|327318139|gb|AEA42631.1| peptidase S41 [Fluviicola taffensis DSM 16823]
          Length = 1088

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 85/237 (35%), Gaps = 35/237 (14%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +  P  SP+ + + +      DI +V             +    +    P FS +G
Sbjct: 29  NPLWMRYPVISPDGKTIVFTY--KGDIYQV----PAAGGVAAPVTLSGAHDFMPVFSPDG 82

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---- 325
           K    +  +    D++SV LQ  AT+RLT     +     S D  +I+F + R       
Sbjct: 83  KTIYFASDRHGNFDVFSVPLQGGATKRLTFHSSNDYPQCLSDDGKRIIFIAARGDNAAMS 142

Query: 326 -------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKF 366
                   ++Y +  +G  +K+   +   +  +  W+  G  + F               
Sbjct: 143 QFPYGALGEVYSVGIDGGREKQ---ELSITAENIKWNKAGTKMLFHDKKGYEDPWRKHHQ 199

Query: 367 SGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           S     + + +K+G +   L +     + P W+    ++ +  +K G     ++ ++
Sbjct: 200 SSVTRDVWMYEKEGDKFTKLTDFGGEDRNPVWNSDESNIFYLSEKSGS--YNVWKMN 254



 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 77/225 (34%), Gaps = 28/225 (12%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            +M  R+   P+        +  P  S +GK  + + + D    IY V         +T 
Sbjct: 13  MIMSLRMPTPPQEASTNPLWMRYPVISPDGKTIVFTYKGD----IYQVPAAGGVAAPVTL 68

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +   +    +SPD   I F SDR G   ++ +   G   KR++    ++ +    S  G 
Sbjct: 69  SGAHDFMPVFSPDGKTIYFASDRHGNFDVFSVPLQGGATKRLTF-HSSNDYPQCLSDDGK 127

Query: 360 LIAFTKFSGEKF-----------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF-- 406
            I F    G+              +  +  DG +E+  +     +   W+ +G  ++F  
Sbjct: 128 RIIFIAARGDNAAMSQFPYGALGEVYSVGIDGGREKQEL-SITAENIKWNKAGTKMLFHD 186

Query: 407 --------SRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQW 442
                    +         ++  +  G +   L +      +P W
Sbjct: 187 KKGYEDPWRKHHQSSVTRDVWMYEKEGDKFTKLTDFGGEDRNPVW 231



 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 56/300 (18%), Positives = 121/300 (40%), Gaps = 40/300 (13%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           SD+       EK   +  +  ++ S  +   +    V   D   +R+L+ S +  L    
Sbjct: 233 SDESNIFYLSEKS-GSYNVWKMNPSSPNAATQ----VSKFDKNPVRFLSVSNENTLC--- 284

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQ 277
           +  + +   Y   +  +  +V +     DR      +           + NGK  + +  
Sbjct: 285 YGYDGE--IYTQKEGSNPQKVNIQINAEDRNADNKNSVETGGASEIAVAPNGKEVVFT-- 340

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV------- 330
                D+++V L++  T+++TNT     + S+SPD   I++ S+R     +Y        
Sbjct: 341 --NHGDVFTVSLENGVTKQITNTPEEERNVSFSPDGKAILYASERNKIWGIYQTTMIRKE 398

Query: 331 -----MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                + +   ++  I  DKE+  F P +SP G  IAF +      A+ V      + R 
Sbjct: 399 DAYFYVSTLLKEEALIVTDKES--FQPQYSPDGKEIAFLENRT---AVSVYNLASKKIRN 453

Query: 386 LVEDSNLQAPT-------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL-INTPAYA 437
           ++ ++   + +       W+P  + ++ S  +DG+   ++  +D++G    L +    ++
Sbjct: 454 VLPETKNYSYSDGDQTFNWAPDSKYILVSFLQDGNWHEQIGLVDVSGGKPMLELTQNGFS 513



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 81/215 (37%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +PN ++V +   +  D+  V L +       K+I N         FS +GK  L + +
Sbjct: 329 AVAPNGKEVVFT--NHGDVFTVSLEN----GVTKQITNTPEEERNVSFSPDGKAILYASE 382

Query: 278 KDEAMDIYSVDLQSN-----------ATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +++   IY   +                E L  T   +    YSPD  +I F  +R    
Sbjct: 383 RNKIWGIYQTTMIRKEDAYFYVSTLLKEEALIVTDKESFQPQYSPDGKEIAFLENRT--- 439

Query: 327 QLYVMQSNGSDQKRISQD-KEASYFDPV----WSPQGDLIAFTKFSGEKFA--IGVMKKD 379
            + V        + +  + K  SY D      W+P    I  +      +   IG++   
Sbjct: 440 AVSVYNLASKKIRNVLPETKNYSYSDGDQTFNWAPDSKYILVSFLQDGNWHEQIGLVDVS 499

Query: 380 GSQERL-LVEDS-NLQAPTWSPSGRSLIFSRKKDG 412
           G +  L L ++  +   P +   G+++++   +DG
Sbjct: 500 GGKPMLELTQNGFSNGGPKFQLDGKAILWFSNRDG 534



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 98/285 (34%), Gaps = 57/285 (20%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAY----------ATYDDEDILRVYLMDTRIDRA 249
           GA  R    S +        S + +++ +          + +    +  VY +     R 
Sbjct: 105 GATKRLTFHSSNDYPQ--CLSDDGKRIIFIAARGDNAAMSQFPYGALGEVYSVGIDGGRE 162

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDE------------AMDIYSVDLQSNATERL 297
            + +      I   +++  G + L   +K                D++  + + +   +L
Sbjct: 163 KQELSITAENI---KWNKAGTKMLFHDKKGYEDPWRKHHQSSVTRDVWMYEKEGDKFTKL 219

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSP 356
           T+    + +  ++ D S I + S++ G   ++ M  +  +   ++S+  +        S 
Sbjct: 220 TDFGGEDRNPVWNSDESNIFYLSEKSGSYNVWKMNPSSPNAATQVSKFDKNPVRFLSVS- 278

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLL----------------VEDSNLQAPTWSPS 400
             + + +    G    I   K +GS  + +                VE         +P+
Sbjct: 279 NENTLCY----GYDGEIYTQK-EGSNPQKVNIQINAEDRNADNKNSVETGGASEIAVAPN 333

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
           G+ ++F+          ++++ L NG  + + NTP    +  +  
Sbjct: 334 GKEVVFTNH------GDVFTVSLENGVTKQITNTPEEERNVSFSP 372



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 55/124 (44%), Gaps = 8/124 (6%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSS 267
           D+  F+P++SP+ +++A+   ++   + VY + ++  R         ++        ++ 
Sbjct: 417 DKESFQPQYSPDGKEIAF--LENRTAVSVYNLASKKIRNVLPETKNYSYSDGDQTFNWAP 474

Query: 268 NGKRALISVQKDEAM--DIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREG 324
           + K  L+S  +D      I  VD+        LT   F N    +  D   I++ S+R+G
Sbjct: 475 DSKYILVSFLQDGNWHEQIGLVDVSGGKPMLELTQNGFSNGGPKFQLDGKAILWFSNRDG 534

Query: 325 KEQL 328
            + +
Sbjct: 535 MKNV 538


>gi|220918187|ref|YP_002493491.1| WD40 domain protein beta Propeller [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956041|gb|ACL66425.1| WD40 domain protein beta Propeller [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 704

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 51/254 (20%), Positives = 95/254 (37%), Gaps = 11/254 (4%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K +L  +     +      S   +     +SP +    Y  Y         L   +  
Sbjct: 423 SPKRTLWRVPLGPDHADLAAASPIPLTTGNGWSP-RLGPGYLVYLSAKGAGDGLWKLQDG 481

Query: 248 RAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            + +      + +  AP    +G+      ++     +  VD        +T+ L ++ +
Sbjct: 482 ASTELWSQPGARIAGAPAVRRDGRTIAFWTREGGRTRLRVVDADGTGGRVVTDALQLSGA 541

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++ PD   I   +  EG  +L+ +  +G +   +  +  A   DP WSP GDL+AFT  
Sbjct: 542 PAWMPDGRSIAVGAIVEGAPRLFRVPLDGGEPAALVAEPSA---DPAWSPAGDLLAFTGA 598

Query: 367 S-GEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             G  F +  +  DGS  R+  L      +   + P GRS+     +       L ++DL
Sbjct: 599 DVGTTFPLRAVNADGSAHRMPPLTLTRGARHVAFLPDGRSIAVL--RGEIRRKHLAAVDL 656

Query: 424 -NGRNETLINTPAY 436
            +G +  L+  P  
Sbjct: 657 ASGASRRLVVLPRD 670



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 72/212 (33%), Gaps = 8/212 (3%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGA+    +    +I   P    + + +A+ T +        +         + + +  
Sbjct: 479 QDGASTELWSQPGARIAGAPAVRRDGRTIAFWTREGGRTRLRVVDADGTGG--RVVTDAL 536

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            +  AP +  +G+   +    + A  ++ V L       L      +   ++SP    + 
Sbjct: 537 QLSGAPAWMPDGRSIAVGAIVEGAPRLFRVPLDGGEPAALVAEPSAD--PAWSPAGDLLA 594

Query: 318 FE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           F  +D      L  + ++GS  +              + P G  IA  +    +  +  +
Sbjct: 595 FTGADVGTTFPLRAVNADGSAHRMPPLTLTRGARHVAFLPDGRSIAVLRGEIRRKHLAAV 654

Query: 377 KKDGSQERLLV---EDSNLQAPTWSPSGRSLI 405
                  R LV    D ++     SP GR L+
Sbjct: 655 DLASGASRRLVVLPRDFDVGDFDVSPDGRELV 686



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 83/243 (34%), Gaps = 18/243 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-- 264
                 +      S + + VA+ +      + V+L      +           ++ P   
Sbjct: 166 LTDFGGVEQAAAISADGRFVAFLSDRAGR-VDVWLTQVGSGQFQDLTRGSAPELVNPSIR 224

Query: 265 ---FSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              FS +G       +           I++V L                  +++ D +++
Sbjct: 225 TLGFSPDGALVTFWARGRTGSSPPDIGIWAVPLLGGPPRPYLEGAA---EYAWTRDGTRL 281

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFS-GEKFAIG 374
           V  +   G            D +RI       +    VWSP    I F + +  ++  + 
Sbjct: 282 VHHTPGPGDPMYVSEAGRPQDARRIFSAPSGLHAHFQVWSPDQAFIYFVQGALPDRLDLW 341

Query: 375 VMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            ++ DGS  ERL   D  +  P ++   R+L++       +G  L+++D+ GR    + T
Sbjct: 342 RIRPDGSAPERLTHHDGVVSHPVFA-DERTLLYLATDPDGSGPWLHALDVEGRATRRVAT 400

Query: 434 PAY 436
            A 
Sbjct: 401 GAE 403



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/327 (13%), Positives = 103/327 (31%), Gaps = 61/327 (18%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
             D      +      S      +  +   G   R       +      ++ +  ++ + 
Sbjct: 229 SPDGALVTFWARGRTGSSPPDIGIWAVPLLGGPPRPYLEGAAEY----AWTRDGTRLVHH 284

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALIS-VQKDEAMDIYS 286
           T    D +  Y+ +    +  +RI +  S + A    +S +            + +D++ 
Sbjct: 285 TPGPGDPM--YVSEAGRPQDARRIFSAPSGLHAHFQVWSPDQAFIYFVQGALPDRLDLWR 342

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDK 345
           +    +A ERLT+   +     ++ + + +   +D +G    L+ +   G   +R++   
Sbjct: 343 IRPDGSAPERLTHHDGVVSHPVFADERTLLYLATDPDGSGPWLHALDVEGRATRRVATGA 402

Query: 346 EASYFDPVWSPQGDLIA-----------------------------------FTKFSGEK 370
           E  Y     S  G  +                                    ++   G  
Sbjct: 403 ER-YTSLAASADGRRLVLTQASPKRTLWRVPLGPDHADLAAASPIPLTTGNGWSPRLGPG 461

Query: 371 FAIGV-MKKDGSQERLLVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKL 418
           + + +  K  G     L + ++ +           AP     GR++ F  ++ G T  +L
Sbjct: 462 YLVYLSAKGAGDGLWKLQDGASTELWSQPGARIAGAPAVRRDGRTIAFWTREGGRT--RL 519

Query: 419 YSIDLNGRNETLINTPAY-ASDPQWVG 444
             +D +G    ++      +  P W+ 
Sbjct: 520 RVVDADGTGGRVVTDALQLSGAPAWMP 546



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 21/172 (12%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            L       LT+   +  +A+ S D   + F SDR G+  +++ Q      + +++    
Sbjct: 157 PLSGARFVPLTDFGGVEQAAAISADGRFVAFLSDRAGRVDVWLTQVGSGQFQDLTRGSAP 216

Query: 348 SYFDPV-----WSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              +P      +SP G L+ F     T  S     I  +   G   R  +E +   A  W
Sbjct: 217 ELVNPSIRTLGFSPDGALVTFWARGRTGSSPPDIGIWAVPLLGGPPRPYLEGAAEYA--W 274

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPA--YASDPQWVG 444
           +  G  L+      GD       +   GR +    + + P+  +A    W  
Sbjct: 275 TRDGTRLVHHTPGPGDPMY----VSEAGRPQDARRIFSAPSGLHAHFQVWSP 322


>gi|8101030|gb|AAF72523.1|AF248951_4 MdsD protein [Prevotella sp. RS2]
          Length = 1073

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 75/200 (37%), Gaps = 28/200 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G +   + + D    I++V +    T++LT     +    +SPDS  I F S RE
Sbjct: 30  AISPDGSQIAFAYKGD----IWTVPVAGGQTKQLTTHSAYDSYPVWSPDSKNIAFVSTRE 85

Query: 324 GKEQLYVMQSNGSDQKRISQ-----------DKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           G   +++M   G    R++            D +   F+    P    I F   +G    
Sbjct: 86  GSRDVWIMPREGGAPHRLTTSSGSETPVAFLDNDHVLFESQVMPTAQSIFFA--NGNFPQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF---------SRKKDGDTGSKLYSIDL 423
           I  +  +G + + L  +  L+AP+ +  G  L +          +         ++ +  
Sbjct: 144 IYSVSVNGGRPK-LYSELTLKAPSINSKGDVLYYDQKGSEDQWRKHHTSPITRDIWLLR- 201

Query: 424 NGRNETLINTPAYASDPQWV 443
           +G+   L +      DP W 
Sbjct: 202 DGKYRKLTSFAGEDRDPVWG 221



 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 66/303 (21%), Positives = 115/303 (37%), Gaps = 38/303 (12%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           D Y  ++ E G FN     V  + V G  K  L      G  +R+LT + D  L    F 
Sbjct: 224 DAYYYLSEEDGTFN-----VYRASVDGTAKQQL--THFKGNPVRFLTRANDGTL---SFG 273

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + +       ++   + V +   RID    R   +         S NGK     +  D 
Sbjct: 274 YDGELYTLREGEEPRKVSVSVTADRIDAELDRQLRYSG-ASEIAVSPNGKEIAFVMHGD- 331

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              +Y   +  N T+++T+T     S  +S D   IV+ ++R G  Q+Y        +  
Sbjct: 332 ---VYVTSVDYNTTKQITDTPEQERSIDFSSDGRSIVYAAERNGLWQIYQSTIKNKKEDL 388

Query: 341 ISQDKEA----------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +   E           + F P++SP G  +AF +   ++  +  +     + R L++  
Sbjct: 389 FTYATEIEEEQLVKSNKTSFQPMYSPDGKSVAFLE---DRTRLCAVDVKSHKVRQLMDGK 445

Query: 391 NL-------QAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDP 440
            +       Q  +WSP  R L+ S    G   ++   L   D  G    + N+    ++ 
Sbjct: 446 YMYSYSDGDQWFSWSPDSRWLLASYIGTGGWNNRDIALVPADGKGEIRNITNSGYNDTNG 505

Query: 441 QWV 443
           +WV
Sbjct: 506 KWV 508



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 90/242 (37%), Gaps = 36/242 (14%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +     SP+  ++A+A     DI  V +         K++    +    P +S + K  
Sbjct: 25  WMRHSAISPDGSQIAFAY--KGDIWTVPV----AGGQTKQLTTHSAYDSYPVWSPDSKNI 78

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------R 322
                ++ + D++ +  +  A  RLT +       ++  D+  ++FES            
Sbjct: 79  AFVSTREGSRDVWIMPREGGAPHRLTTSSGSETPVAFL-DNDHVLFESQVMPTAQSIFFA 137

Query: 323 EGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-----------TKFSGEK 370
            G   Q+Y +  NG   K  S   E +   P  + +GD++ +              S   
Sbjct: 138 NGNFPQIYSVSVNGGRPKLYS---ELTLKAPSINSKGDVLYYDQKGSEDQWRKHHTSPIT 194

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             I +++ DG   +L       + P W  +G +  +  ++DG     +Y   ++G  +  
Sbjct: 195 RDIWLLR-DGKYRKLTSFAGEDRDPVWG-NGDAYYYLSEEDGTF--NVYRASVDGTAKQQ 250

Query: 431 IN 432
           + 
Sbjct: 251 LT 252



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/384 (10%), Positives = 98/384 (25%), Gaps = 137/384 (35%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  +  +   G   + LT         P +SP+ + +A+ +  +    R   +  R  
Sbjct: 41  AYKGDIWTVPVAGGQTKQLTT-HSAYDSYPVWSPDSKNIAFVSTREGS--RDVWIMPREG 97

Query: 248 RAPKRIGNFRSMILAPRF------------SSNGKRALISVQKDEAMDIYSVDLQSNAT- 294
            AP R+           F                +    +        IYSV +      
Sbjct: 98  GAPHRLTTSSGSETPVAFLDNDHVLFESQVMPTAQSIFFA--NGNFPQIYSVSVNGGRPK 155

Query: 295 --------------------------------------------------ERLTNTLFIN 304
                                                              +LT+    +
Sbjct: 156 LYSELTLKAPSINSKGDVLYYDQKGSEDQWRKHHTSPITRDIWLLRDGKYRKLTSFAGED 215

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------------------- 342
               +  +     + S+ +G   +Y    +G+ +++++                      
Sbjct: 216 RDPVWG-NGDAYYYLSEEDGTFNVYRASVDGTAKQQLTHFKGNPVRFLTRANDGTLSFGY 274

Query: 343 -------------------------------QDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                                          Q + +   +   SP G  IAF        
Sbjct: 275 DGELYTLREGEEPRKVSVSVTADRIDAELDRQLRYSGASEIAVSPNGKEIAFVMHGD--- 331

Query: 372 AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG----------DTGSKLYS 420
            + V   D +  + + +    + +  +S  GRS++++ +++G          +    L++
Sbjct: 332 -VYVTSVDYNTTKQITDTPEQERSIDFSSDGRSIVYAAERNGLWQIYQSTIKNKKEDLFT 390

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
                  E L+ +   +  P +  
Sbjct: 391 YATEIEEEQLVKSNKTSFQPMYSP 414



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 57/156 (36%), Gaps = 16/156 (10%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDED-ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            ++  F+P +SP+ + VA+         + V     R     K + ++        +S +
Sbjct: 403 SNKTSFQPMYSPDGKSVAFLEDRTRLCAVDVKSHKVRQLMDGKYMYSYSDGDQWFSWSPD 462

Query: 269 GKRALISVQKDE---AMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  L S          DI  V          +TN+ + + +  +      ++F+SDR G
Sbjct: 463 SRWLLASYIGTGGWNNRDIALVPADGKGEIRNITNSGYNDTNGKWVLGGKAMLFQSDRAG 522

Query: 325 KE-----------QLYVMQSNGSDQKRISQDKEASY 349
                         +     +  DQ R+S+++ A +
Sbjct: 523 YRSHGSWGTEDDAYIMFFDVDAYDQFRMSKEEYARW 558


>gi|196230985|ref|ZP_03129845.1| peptidase S41 [Chthoniobacter flavus Ellin428]
 gi|196224815|gb|EDY19325.1| peptidase S41 [Chthoniobacter flavus Ellin428]
          Length = 1140

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 92/250 (36%), Gaps = 35/250 (14%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           ++L  P  S  + ++A+    +        +  +      R+   R +   PRFS +G +
Sbjct: 31  RMLQMPAVS--KSEIAFVYGGN------IWIAPKAGGTALRLSTPRGVQQFPRFSPDGAK 82

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES------DREGK 325
              +   D  +DIY + +     +R+T+         + PD   +++ES      DR G 
Sbjct: 83  LAFTGNYDGNVDIYVMPVGGGEPQRITHHGGSERLLGWYPDGQSLLYESHMMAFTDRVG- 141

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIG 374
            QL+ + + G   +++     A       SP G  +AFT              G    I 
Sbjct: 142 -QLFKVPAQGGLPEKL---PVAYGEFGAISPDGHTLAFTPISTDFATWKRYRGGMAPDIW 197

Query: 375 VMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN- 432
           +   +  + E +   ++N   P W   G +L F   +D      +++ +   +    +  
Sbjct: 198 LFDLEKKTAENVTHNEANDSQPMWH--GETLYFISDRDEHERDNIWAYNTRTKETREVTH 255

Query: 433 -TPAYASDPQ 441
            T +    P 
Sbjct: 256 FTESDVHFPS 265



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 91/324 (28%), Gaps = 80/324 (24%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV--YLMDTRIDRA 249
            + VM   G   + +T           + P+ Q + Y ++      RV            
Sbjct: 94  DIYVMPVGGGEPQRITHHGGSERLL-GWYPDGQSLLYESHMMAFTDRVGQLFKVPAQGGL 152

Query: 250 PKRIGNFRSMILAPRFSSNGKRALIS-----------VQKDEAMDIYSVDLQSNATERLT 298
           P+++        A   S +G     +            +   A DI+  DL+    E +T
Sbjct: 153 PEKLPVAYGEFGA--ISPDGHTLAFTPISTDFATWKRYRGGMAPDIWLFDLEKKTAENVT 210

Query: 299 NTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDP---- 352
           +    +    +      + F SDR+   ++ ++   +   + + ++   E+    P    
Sbjct: 211 HNEANDSQPMW--HGETLYFISDRDEHERDNIWAYNTRTKETREVTHFTESDVHFPSVGP 268

Query: 353 -------------------------------------------------VWSPQGDLIAF 363
                                                              SP G    F
Sbjct: 269 DDLVFENDGRLYVLDLGTEQMHEVKIKVATDRATLRPRVQNVAGYVRNAAISPTGKRALF 328

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    I  +  +    R +   S +  + P WSP GR + +   K G+    +   
Sbjct: 329 EARGD----IFSVPAEHGIVRDITSTSGVAERNPAWSPDGRWIAYFSDKTGEYELTIRPS 384

Query: 422 DLNGRNETLINTPAYAS-DPQWVG 444
           D  G  ETL +        PQW  
Sbjct: 385 DKAGGEETLTHLGRGFRYQPQWSP 408



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/316 (13%), Positives = 102/316 (32%), Gaps = 31/316 (9%)

Query: 143 KFFSSPASWRKIAHTISDDIY-QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
            + +     R++ H    D++  S+  +   F +        + +  +      +  D A
Sbjct: 242 AYNTRTKETREVTHFTESDVHFPSVGPDDLVFENDGRLYVLDLGTEQMHEVKIKVATDRA 301

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI- 260
            +R    +    +     SP  ++  +      DI  V           + I +   +  
Sbjct: 302 TLRPRVQNVAGYVRNAAISPTGKRALF--EARGDIFSV----PAEHGIVRDITSTSGVAE 355

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQ-SNATERLTN-TLFINISASYSPDSSQIVF 318
             P +S +G+       K    ++       +   E LT+          +SPD+ +IVF
Sbjct: 356 RNPAWSPDGRWIAYFSDKTGEYELTIRPSDKAGGEETLTHLGRGFRYQPQWSPDAKKIVF 415

Query: 319 ESDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
               +   ++++          +     + + + + F   WS       +      + + 
Sbjct: 416 V---DQAMRIHLYDMETKQVTEVGRQLWAYEGDLARFRVSWSSDSRWFTYAADRENRQS- 471

Query: 374 GVMKKDGSQERLLVEDS---NLQAPTWSPSGRSLIFSRKK------DGDTGSKLYSIDLN 424
            ++  D  ++R L   S   +   P + P GR L +  K+           + +Y+   N
Sbjct: 472 AIVVYDTHEKRELAATSGFYDDDMPVFDPDGRYLYYRSKRVFEPIYSESDNTWIYT---N 528

Query: 425 GRNETLINTPAYASDP 440
           G +   +        P
Sbjct: 529 GESLVALPLRKDVPSP 544



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 100/263 (38%), Gaps = 35/263 (13%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           VS+S ++ +   ++ +  + G     L+  R  +   PRFSP+  K+A+    D + + +
Sbjct: 38  VSKSEIAFVYGGNIWIAPKAGGTALRLSTPR-GVQQFPRFSPDGAKLAFTGNYDGN-VDI 95

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----DEAMDIYSVDLQSNATE 295
           Y+M       P+RI +         +  +G+  L         D    ++ V  Q    E
Sbjct: 96  YVMPVG-GGEPQRITHHGGSERLLGWYPDGQSLLYESHMMAFTDRVGQLFKVPAQGGLPE 154

Query: 296 RLTNTLFINISASYSPDSSQIVFE----------SDREG-KEQLYVMQSNGSDQKRISQD 344
           +L   +      + SPD   + F             R G    +++        + ++ +
Sbjct: 155 KL--PVAYGEFGAISPDGHTLAFTPISTDFATWKRYRGGMAPDIWLFDLEKKTAENVTHN 212

Query: 345 KEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPS 400
            EA+   P+W   G+ + F       E+  I        + R +    +S++  P+  P 
Sbjct: 213 -EANDSQPMW--HGETLYFISDRDEHERDNIWAYNTRTKETREVTHFTESDVHFPSVGPD 269

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL 423
              L+F      +   +LY +DL
Sbjct: 270 --DLVF------ENDGRLYVLDL 284


>gi|88857110|ref|ZP_01131753.1| hypothetical protein PTD2_01081 [Pseudoalteromonas tunicata D2]
 gi|88820307|gb|EAR30119.1| hypothetical protein PTD2_01081 [Pseudoalteromonas tunicata D2]
          Length = 673

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 99/277 (35%), Gaps = 23/277 (8%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  V+    + +L ++D     ++    S +     PR+SP+  KVA+ +       +++
Sbjct: 54  SNDVMKDSTRRNLWLVDTK-TGVQSPLFSDENQYMSPRWSPDGSKVAFLSNASGST-QIH 111

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTN 299
           +     +R    +    S +    +S +GK    S +  ++   I  +  +    +   +
Sbjct: 112 VHYLTENR-TALLSQLESGVSGLTWSPDGKWLAFSQLVAEKPAVIAKMPAKPKGAKW--S 168

Query: 300 TLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              I I  A Y  D   +V    + G   ++VM S G   ++++           W    
Sbjct: 169 EPAIVIDKAYYQADGQGLV----KPGYRHVFVMPSEGGTPRQLTYGNYHHSGKLAWRSDS 224

Query: 359 DLIAFTKFSGEKFA-------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             + F+    + +        +  +   G   +L     +  +P +S  G+ L +    +
Sbjct: 225 KALVFSANRFDDWEYKRLESDLFEIDFSGKLTQLTDAPGSEHSPEFSKDGKQLAYLSASN 284

Query: 412 G---DTGSKLYSIDLNGRNETLINT--PAYASDPQWV 443
                   KL  +  + +   LI        +DP W+
Sbjct: 285 ELNPYRNHKLAIMAWSSKESKLIAADFDRSIADPTWL 321



 Score = 96.6 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 80/232 (34%), Gaps = 54/232 (23%)

Query: 265 FSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            S +G++ +     ++        +++ VD ++     L +     +S  +SPD S++ F
Sbjct: 41  LSPSGQQVVYIRNSNDVMKDSTRRNLWLVDTKTGVQSPLFSDENQYMSPRWSPDGSKVAF 100

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF------------ 366
            S+  G  Q++V      ++  +    E+      WSP G  +AF++             
Sbjct: 101 LSNASGSTQIHVHYL-TENRTALLSQLESGVSGLTWSPDGKWLAFSQLVAEKPAVIAKMP 159

Query: 367 ----------------------------SGEKFAIGVMKKDGSQERLLVEDSNLQAP--T 396
                                             + VM  +G   R L   +   +    
Sbjct: 160 AKPKGAKWSEPAIVIDKAYYQADGQGLVKPGYRHVFVMPSEGGTPRQLTYGNYHHSGKLA 219

Query: 397 WSPSGRSLIFSRKKDGDT-----GSKLYSIDLNGRNETLINTPAYASDPQWV 443
           W    ++L+FS  +  D       S L+ ID +G+   L + P     P++ 
Sbjct: 220 WRSDSKALVFSANRFDDWEYKRLESDLFEIDFSGKLTQLTDAPGSEHSPEFS 271



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 52/344 (15%), Positives = 106/344 (30%), Gaps = 75/344 (21%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            SD+  Q ++       S++ F+S +  S  I      +     N   L    +  +   
Sbjct: 80  FSDE-NQYMSPRWSPDGSKVAFLSNASGSTQIH-----VHYLTENRTALLSQLESGVSGL 133

Query: 218 RFSPNQQKVAYATYDDEDI--------------------------------------LRV 239
            +SP+ + +A++    E                                         R 
Sbjct: 134 TWSPDGKWLAFSQLVAEKPAVIAKMPAKPKGAKWSEPAIVIDKAYYQADGQGLVKPGYRH 193

Query: 240 YLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAM-------DIYSVDLQS 291
             +       P+++            + S+ K  + S  + +         D++ +D  S
Sbjct: 194 VFVMPSEGGTPRQLTYGNYHHSGKLAWRSDSKALVFSANRFDDWEYKRLESDLFEIDF-S 252

Query: 292 NATERLTNTLFINISASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRISQDKE 346
               +LT+      S  +S D  Q+ + S     +     +L +M  +  + K I+ D +
Sbjct: 253 GKLTQLTDAPGSEHSPEFSKDGKQLAYLSASNELNPYRNHKLAIMAWSSKESKLIAADFD 312

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSPSGRSL 404
            S  DP W    + +A +     K  +  +   G  +     +  + L  P  S  G   
Sbjct: 313 RSIADPTWLS-SNTLAISYDDFGKRKLATITTKGKITDLTDTLSGTTLGRPYIS--GE-- 367

Query: 405 IFSRKKDGD---------TGSKLYSIDLNGRNETLINTPAYASD 439
            FS    G+           S +     +G+ + L +      D
Sbjct: 368 -FSANYSGNIAFTHGTALRPSDVAVATTSGKVKQLTHLNDDLLD 410



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 14/104 (13%)

Query: 355 SPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFS 407
           SP G  + + + S +         + ++      +  L  D N   +P WSP G  + F 
Sbjct: 42  SPSGQQVVYIRNSNDVMKDSTRRNLWLVDTKTGVQSPLFSDENQYMSPRWSPDGSKVAFL 101

Query: 408 RKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVGF 445
               G T   ++ +  N R   L      ++   ++ D +W+ F
Sbjct: 102 SNASGSTQIHVHYLTEN-RTALLSQLESGVSGLTWSPDGKWLAF 144


>gi|149276299|ref|ZP_01882443.1| hypothetical protein PBAL39_01227 [Pedobacter sp. BAL39]
 gi|149232819|gb|EDM38194.1| hypothetical protein PBAL39_01227 [Pedobacter sp. BAL39]
          Length = 1046

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/169 (26%), Positives = 77/169 (45%), Gaps = 13/169 (7%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNA-TERLT---------NTLFI 303
           N  +M +AP  S +GK      +KD   +D++  D ++     +L+         +  F+
Sbjct: 281 NAGNMNVAPAISPDGKFLAFLSEKDLFGIDLFLADAKTGKILRKLSSQISNSHIDDFNFL 340

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             + ++SPDS Q  F    +G+ QL V+  ++G    R +    A + +  WS  GD IA
Sbjct: 341 ESAGAWSPDSKQFAFSIFSKGRNQLMVIDVASGKVVLRAAMGDVAQFGNLSWSTNGDDIA 400

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKK 410
           F+     +  I        Q   + +D  +  AP++SP G  LIFS  +
Sbjct: 401 FSGMVEGQSDIFSYNLKTKQVTQITDDIYSDYAPSYSPDGSKLIFSSDR 449



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 87/248 (35%), Gaps = 28/248 (11%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-------- 260
           +   +   P  SP+ + +A+ +  D   + ++L D +  +  +++ +  S          
Sbjct: 281 NAGNMNVAPAISPDGKFLAFLSEKDLFGIDLFLADAKTGKILRKLSSQISNSHIDDFNFL 340

Query: 261 -LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQI 316
             A  +S + K+   S+       +  +D+ S     L   +       + S+S +   I
Sbjct: 341 ESAGAWSPDSKQFAFSIFSKGRNQLMVIDVASGKVV-LRAAMGDVAQFGNLSWSTNGDDI 399

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------- 369
            F    EG+  ++          +I+ D   S + P +SP G  + F+            
Sbjct: 400 AFSGMVEGQSDIFSYNLKTKQVTQIT-DDIYSDYAPSYSPDGSKLIFSSDRASINSGTKD 458

Query: 370 -----KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                   I  +      +  + + +N     +S   + + F   +DG     LY  +L 
Sbjct: 459 AVHPLNMTIYDISSKTLSDVPVFKGANNLNAMFSGDSKRIFFLSNRDGFR--NLYEYNLE 516

Query: 425 GRNETLIN 432
            ++   + 
Sbjct: 517 NQDLKQLT 524



 Score = 96.2 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 82/212 (38%), Gaps = 19/212 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISV 276
            +SP+ ++ A++ +      ++ ++D    +   R             +S+NG     S 
Sbjct: 345 AWSPDSKQFAFSIFSKGRN-QLMVIDVASGKVVLRAAMGDVAQFGNLSWSTNGDDIAFSG 403

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----EGKE------ 326
             +   DI+S +L++    ++T+ ++ + + SYSPD S+++F SDR     G +      
Sbjct: 404 MVEGQSDIFSYNLKTKQVTQITDDIYSDYAPSYSPDGSKLIFSSDRASINSGTKDAVHPL 463

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +   +      +   K A+  + ++S     I F         +     +    + L
Sbjct: 464 NMTIYDISSKTLSDVPVFKGANNLNAMFSGDSKRIFFLSNRDGFRNLYEYNLENQDLKQL 523

Query: 387 VE------DSNLQAPTWSPS-GRSLIFSRKKD 411
            +           +P  S S    +++S  + 
Sbjct: 524 TDYFTGISGITEFSPAISVSRNDDIVYSYYRS 555


>gi|83945669|ref|ZP_00958014.1| Acylaminoacyl-peptidase [Oceanicaulis alexandrii HTCC2633]
 gi|83850870|gb|EAP88730.1| Acylaminoacyl-peptidase [Oceanicaulis alexandrii HTCC2633]
          Length = 682

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 113/319 (35%), Gaps = 73/319 (22%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           I++    V  V+    + L  MD DG   R+LT          ++SP+ +++A+    D 
Sbjct: 50  IVYTRTRVDAVNDGFASELWAMDSDGERHRFLTRGSSA-----QWSPDGRRLAFIRGVDG 104

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----------------- 277
              ++++     + A  +I + +  I   R+S +G+      +                 
Sbjct: 105 HT-QLFVRWMDAEGAESQITHEQLTIKQFRWSPDGESIAFLAETPLEPAMQISLPARPEG 163

Query: 278 ----------------------KDEAMDIYSVDLQSNATERLTNTLFINI---------S 306
                                 K     ++ V  +     ++T   +            S
Sbjct: 164 AQWTADPLVTDRMNYRIDRQGLKSGYDHLFVVSAEGGTPRQITAGDWDATSKFSGVGAGS 223

Query: 307 ASYSPDSSQIVFES-------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             ++PDS+ +VF+            +  ++ +     D   ++ D + ++ +P  SP G 
Sbjct: 224 FDWTPDSASLVFDGILDPEDEAASRQSDIHRVVLASGDITTLT-DGDGNWANPRVSPNGR 282

Query: 360 LIAFTKFSGEKF-----AIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDG 412
            + ++  +  +       +  M  DGS +R+L  D    +  PTWS   R L ++    G
Sbjct: 283 YVVYSGHAASEVNYPASHLMRMDLDGSDKRVLRADLPDGVGNPTWSDDSRGLYYTMNYHG 342

Query: 413 DTGSKLYSIDLNGRNETLI 431
            T   L+ I   G +  + 
Sbjct: 343 ST--DLHYITTGGSDRQIT 359



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 95/289 (32%), Gaps = 63/289 (21%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P+ +P+ + + Y     + +   +  +     +      F +   + ++S +G+R     
Sbjct: 41  PQIAPDGEDIVYTRTRVDAVNDGFASELWAMDSDGERHRFLTRGSSAQWSPDGRRLAFIR 100

Query: 277 QKDEAMDIYS--VDLQSNATERLTNTLFINISASYSPDSSQIVF---------------- 318
             D    ++   +D +  A  ++T+         +SPD   I F                
Sbjct: 101 GVDGHTQLFVRWMDAE-GAESQITHEQLTIKQFRWSPDGESIAFLAETPLEPAMQISLPA 159

Query: 319 ------------ESDR-----------EGKEQLYVMQSNGSDQKRISQD--------KEA 347
                        +DR            G + L+V+ + G   ++I+             
Sbjct: 160 RPEGAQWTADPLVTDRMNYRIDRQGLKSGYDHLFVVSAEGGTPRQITAGDWDATSKFSGV 219

Query: 348 SYFDPVWSPQGDLIAFTKF-------SGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSP 399
                 W+P    + F          +  +  I  +         L + D N   P  SP
Sbjct: 220 GAGSFDWTPDSASLVFDGILDPEDEAASRQSDIHRVVLASGDITTLTDGDGNWANPRVSP 279

Query: 400 SGRSLIFSRKKDGDTG---SKLYSIDLNGRNETLI--NTPAYASDPQWV 443
           +GR +++S     +     S L  +DL+G ++ ++  + P    +P W 
Sbjct: 280 NGRYVVYSGHAASEVNYPASHLMRMDLDGSDKRVLRADLPDGVGNPTWS 328



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/323 (14%), Positives = 90/323 (27%), Gaps = 64/323 (19%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA------ 229
           R+ F+    V G  +  +  MD +GA  +          F  R+SP+ + +A+       
Sbjct: 95  RLAFI--RGVDGHTQLFVRWMDAEGAESQITHEQLTIKQF--RWSPDGESIAFLAETPLE 150

Query: 230 -------------------------------TYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
                                              +       + +     P++I     
Sbjct: 151 PAMQISLPARPEGAQWTADPLVTDRMNYRIDRQGLKSGYDHLFVVSAEGGTPRQITAGDW 210

Query: 259 MILAP---------RFSSNGKRALISVQKDEAM-------DIYSVDLQSNATERLTNTLF 302
              +           ++ +    +     D          DI+ V L S     LT+   
Sbjct: 211 DATSKFSGVGAGSFDWTPDSASLVFDGILDPEDEAASRQSDIHRVVLASGDITTLTDGDG 270

Query: 303 INISASYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              +   SP+   +V+              L  M  +GSD++ +  D      +P WS  
Sbjct: 271 NWANPRVSPNGRYVVYSGHAASEVNYPASHLMRMDLDGSDKRVLRADLPDGVGNPTWSDD 330

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              + +T        +  +   GS  ++      L   + S  G  +  +      +   
Sbjct: 331 SRGLYYTMNYHGSTDLHYITTGGSDRQITEGMHRLYVSSISEDG--VAAAVHSAPQSTPN 388

Query: 418 LYSIDLNGRNETLINTPAYASDP 440
           +  ID  G    L +      D 
Sbjct: 389 VALIDRRGDIRLLTDLNGDILDG 411



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 81/246 (32%), Gaps = 65/246 (26%)

Query: 257 RSMILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                +P+ + +G+  + +  +        A +++++D        LT       SA +S
Sbjct: 35  WEQAGSPQIAPDGEDIVYTRTRVDAVNDGFASELWAMDSDGERHRFLTRGS----SAQWS 90

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------- 363
           PD  ++ F    +G  QL+V   +    +     ++ +     WSP G+ IAF       
Sbjct: 91  PDGRRLAFIRGVDGHTQLFVRWMDAEGAESQITHEQLTIKQFRWSPDGESIAFLAETPLE 150

Query: 364 --------TKFSGEKF------------------------AIGVMKKDGSQERLLV---- 387
                    +  G ++                         + V+  +G   R +     
Sbjct: 151 PAMQISLPARPEGAQWTADPLVTDRMNYRIDRQGLKSGYDHLFVVSAEGGTPRQITAGDW 210

Query: 388 ------EDSNLQAPTWSPSGRSLIF-----SRKKDGDTGSKLYSIDL-NGRNETLINTPA 435
                       +  W+P   SL+F        +     S ++ + L +G   TL +   
Sbjct: 211 DATSKFSGVGAGSFDWTPDSASLVFDGILDPEDEAASRQSDIHRVVLASGDITTLTDGDG 270

Query: 436 YASDPQ 441
             ++P+
Sbjct: 271 NWANPR 276



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 39/101 (38%), Gaps = 9/101 (8%)

Query: 350 FDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             P  +P G+ I +T+        G    +  M  DG + R L   S+ Q   WSP GR 
Sbjct: 39  GSPQIAPDGEDIVYTRTRVDAVNDGFASELWAMDSDGERHRFLTRGSSAQ---WSPDGRR 95

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           L F R  DG T   +  +D  G    + +        +W  
Sbjct: 96  LAFIRGVDGHTQLFVRWMDAEGAESQITHEQLTIKQFRWSP 136



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 80/241 (33%), Gaps = 32/241 (13%)

Query: 155 AHTI--SDDIYQSITGEKGDFNSRIL-----FVSESVVSGIIKNS----LCVMDRDGANI 203
            H +  +     ++T   G++ +  +     +V  S  +    N     L  MD DG++ 
Sbjct: 252 IHRVVLASGDITTLTDGDGNWANPRVSPNGRYVVYSGHAASEVNYPASHLMRMDLDGSDK 311

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R L       +  P +S + + + Y           Y+     D   ++I      +   
Sbjct: 312 RVLRADLPDGVGNPTWSDDSRGLYYTMNYHGSTDLHYITTGGSD---RQITEGMHRLYVS 368

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI--------NISASYSP--DS 313
             S +G  A +        ++  +D +      LT+            +I   + P  D 
Sbjct: 369 SISEDGVAAAVHSAPQSTPNVALIDRR-GDIRLLTDLNGDILDGVELGDIEEIWYPSFDG 427

Query: 314 SQ----IVFESDREGKEQL-YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            Q    I++  D +  E    V+  +G          + +Y    W+  G ++ +T   G
Sbjct: 428 EQIQGWIIYPPDFDPNETYPMVLNIHGGPHA--MYGVDFNYRFQEWAANGYVVLYTNPRG 485

Query: 369 E 369
            
Sbjct: 486 S 486



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 7/72 (9%)

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLIN 432
           + D  Q     +     +P  +P G  ++++R +    +    S+L+++D +G     + 
Sbjct: 23  RPDTLQLEHYFDWEQAGSPQIAPDGEDIVYTRTRVDAVNDGFASELWAMDSDGERHRFLT 82

Query: 433 TPAYASDPQWVG 444
             + A   QW  
Sbjct: 83  RGSSA---QWSP 91


>gi|153829269|ref|ZP_01981936.1| tricorn protease [Vibrio cholerae 623-39]
 gi|148875234|gb|EDL73369.1| tricorn protease [Vibrio cholerae 623-39]
          Length = 890

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 80/254 (31%), Gaps = 43/254 (16%)

Query: 211 DQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           D     P +      SP+  K+A+             +          +         P 
Sbjct: 32  DSTQARPTWLRDIALSPDGLKIAFTYAGQ------IWLVPAQGGDAVALTESGVYSETPI 85

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S + +    +  +    D++ + +Q   + RLT     +I  ++S D  Q+ F S R G
Sbjct: 86  WSPDSQSIAFTADRYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLG 145

Query: 325 KE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            +             QLY + + G  ++R+      +  D   SP    I +T       
Sbjct: 146 DDKANANVKQGSFMAQLYSVPAAGGREQRVL---PIAISDLAISPSHSDILYTNQPSDEQ 202

Query: 367 -------SGEKFAIG-VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  S     I       G   ++       + P WS  G S+ +  ++ G     +
Sbjct: 203 PWRKGALSDATRDIWQWSPLTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSF--NI 260

Query: 419 YSIDLNGRNETLIN 432
           +    +G     I 
Sbjct: 261 WQQRFDGSEPVQIT 274



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 71/205 (34%), Gaps = 30/205 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G +   +     A  I+ V  Q      LT +   + +  +SPDS  I F +DR 
Sbjct: 45  ALSPDGLKIAFTY----AGQIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRY 100

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------ 371
           G   ++++   G + +R++    A      +S  G  + F+                   
Sbjct: 101 GLGDVFILSIQGGESRRLTYHG-AKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFM 159

Query: 372 -AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYS 420
             +  +   G +E+ ++    +     SPS   ++++ +             D    ++ 
Sbjct: 160 AQLYSVPAAGGREQRVL-PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQ 218

Query: 421 ID-LNGRNETLINTPAYASDPQWVG 444
              L G++  +        +P W  
Sbjct: 219 WSPLTGKHTQITTFRGEDRNPVWSA 243



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 98/331 (29%), Gaps = 89/331 (26%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRID 247
           G + R        I +   FS + Q++ +++    D            + ++Y +     
Sbjct: 113 GESRRLTYHGAKDIPY--AFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAGG 170

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIYSVDLQSNATE 295
           R  + +      I     S +    L + Q             D   DI+     +    
Sbjct: 171 REQRVL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQWSPLTGKHT 227

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------------ 343
           ++T     + +  +S D S + + S++ G   ++  + +GS+  +I+             
Sbjct: 228 QITTFRGEDRNPVWSADGSSMYYLSEQAGSFNIWQQRFDGSEPVQITDHQKLPVRFLSAS 287

Query: 344 ---DKEASYFDPVW--------------------SPQGDLIAFTKFSGEKF--------- 371
              D    +   +W                     P G           +          
Sbjct: 288 LQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEATEMVVAPNAAEV 347

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT---------G 415
                  + V+       + + +    +   ++S  G  LI++ +++G           G
Sbjct: 348 AIVARGDVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSYVNDG 407

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            K +S  L+   E ++ T      P +   +
Sbjct: 408 GKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 341 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDVSFSSDGYRLIYASERE 394

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   +                  LT    + I   YSP+  +IV+   RE +  L
Sbjct: 395 GSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDV-IQPLYSPNLKRIVY---RENRNTL 450

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + I     +     I ++K DGS+ 
Sbjct: 451 KVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEA 510

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNG 425
            + L +    + AP +S  G+ + +     G  D    +   D+ G
Sbjct: 511 PINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDMVVQYDVYG 556



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 99/286 (34%), Gaps = 41/286 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------KVAYATYDDEDILRVYLMDTR 245
           +     DG+    +T  +   +     S           ++       +   +V +   R
Sbjct: 260 IWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRR 319

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +   NF         + N     I  + D    +Y V L S  T+R+T+T    
Sbjct: 320 SAMPDGRHNVNFNLEATEMVVAPNAAEVAIVARGD----VYVVSLLSGLTQRITDTPEAE 375

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPV 353
              S+S D  ++++ S+REG   LY    N             ++  ++ +++     P+
Sbjct: 376 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQD--VIQPL 433

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIF 406
           +SP    I + +       + V   +  +   L++   L +         WSP    ++ 
Sbjct: 434 YSPNLKRIVYRENRNT---LKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVT 490

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGFM 446
             +   +   +L   D +     L  +      P +++D QWV ++
Sbjct: 491 RDRAMSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWL 536



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 19/174 (10%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+  +   ++ + Y+ D        +D   + +      ++ P +S N 
Sbjct: 379 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR +    ++    +   D++ + T  L +   +      ++S  +SPDS  IV   DR 
Sbjct: 439 KRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV-TRDRA 494

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                + +++ +GS+          S F P +S  G  + +   +     I  M
Sbjct: 495 MSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDM 548


>gi|158341565|ref|YP_001522729.1| WD-containing repeat protein [Acaryochloris marina MBIC11017]
 gi|158311806|gb|ABW33415.1| WD repeat protein [Acaryochloris marina MBIC11017]
          Length = 1293

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 86/256 (33%), Gaps = 21/256 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++VVSG + N+L V D      +         +     SP+ Q V  A+YD      + +
Sbjct: 845  QTVVSGSLDNTLKVWDLATGQEQRTLTGHTSPVEGVSISPDGQTVVSASYDH----TLKV 900

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D         +      +     S +G+  ++S   D  + ++  DL +   +R LT  
Sbjct: 901  WDLATGEEQHTLTGHTDSVTGVSISPDGQT-VVSASYDHTLKVW--DLATGEEQRTLTGH 957

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   S SPD   +V  S     + L V      +++R       S +    SP G  
Sbjct: 958  TSTVTGVSISPDGQTVVSAS---WGKTLKVWDLATGEEQRTLTGHTNSVYGVSISPDGQT 1014

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKL 418
            +           + V      +E+  +          + SP G++++      G     L
Sbjct: 1015 VVSGSSDKT---LKVWDLATGEEQRTLTGHTNSVYGVSISPDGQTVV-----SGSLDKTL 1066

Query: 419  YSIDLNGRNETLINTP 434
               DL    E    T 
Sbjct: 1067 KVWDLATGEEQRTLTG 1082



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 90/259 (34%), Gaps = 20/259 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++VVSG + N+L V D      +         +     SP+ Q V   ++D      + +
Sbjct: 761  QTVVSGSLDNTLKVWDLATGEEQRTLTGHTSPVEGVSISPDGQTVVSGSWDK----TLKV 816

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +    + +     S +G+  ++S   D  + ++  DL +   +R LT  
Sbjct: 817  WDLATGEEQRTLTGHTNSVYGVSISPDGQT-VVSGSLDNTLKVW--DLATGQEQRTLTGH 873

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   S SPD   +V  S       L V      +++        S      SP G  
Sbjct: 874  TSPVEGVSISPDGQTVVSASY---DHTLKVWDLATGEEQHTLTGHTDSVTGVSISPDGQT 930

Query: 361  IAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +    +      + V      +E+  L    S +   + SP G++++ +         K+
Sbjct: 931  VVSASYD---HTLKVWDLATGEEQRTLTGHTSTVTGVSISPDGQTVVSASW---GKTLKV 984

Query: 419  YSIDLNGRNETLINTPAYA 437
            + +   G  +  +     +
Sbjct: 985  WDL-ATGEEQRTLTGHTNS 1002



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 99/309 (32%), Gaps = 28/309 (9%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V+   ++        P   R         +Y  +  +     + +               
Sbjct: 634 VQSGLRLSSHVLNQHPEQLR-------SQLYGRLLSQDSPDVTALTQSLAQGPEECWIRC 686

Query: 193 LCV-MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L   +++ G  +          +     SP+ Q V  A+YD      + + D       +
Sbjct: 687 LFPHLNQAGGALVRTLSGHTSNVRGVSISPDGQTVVSASYDH----TLKVWDLATGEEQR 742

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYS 310
            +    S +     S +G+  ++S   D  + ++  DL +   +R LT         S S
Sbjct: 743 TLTGHTSPVEGVSISPDGQT-VVSGSLDNTLKVW--DLATGEEQRTLTGHTSPVEGVSIS 799

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +V  S     + L V      +++R       S +    SP G  +         
Sbjct: 800 PDGQTVVSGS---WDKTLKVWDLATGEEQRTLTGHTNSVYGVSISPDGQTVVSGSLDNT- 855

Query: 371 FAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             + V      QE+  +      ++  + SP G++++ +     D   K++ +   G  +
Sbjct: 856 --LKVWDLATGQEQRTLTGHTSPVEGVSISPDGQTVVSASY---DHTLKVWDL-ATGEEQ 909

Query: 429 TLINTPAYA 437
             +     +
Sbjct: 910 HTLTGHTDS 918



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 89/255 (34%), Gaps = 20/255 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++VVS    ++L V D      +         +     SP+ Q V   + D+     + +
Sbjct: 719 QTVVSASYDHTLKVWDLATGEEQRTLTGHTSPVEGVSISPDGQTVVSGSLDN----TLKV 774

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +    S +     S +G+  ++S   D+ + ++  DL +   +R LT  
Sbjct: 775 WDLATGEEQRTLTGHTSPVEGVSISPDGQT-VVSGSWDKTLKVW--DLATGEEQRTLTGH 831

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                  S SPD   +V  S       L V       ++R      +       SP G  
Sbjct: 832 TNSVYGVSISPDGQTVVSGSL---DNTLKVWDLATGQEQRTLTGHTSPVEGVSISPDGQT 888

Query: 361 IAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +    +      + V      +E+  L     ++   + SP G++++ +     D   K+
Sbjct: 889 VVSASYD---HTLKVWDLATGEEQHTLTGHTDSVTGVSISPDGQTVVSASY---DHTLKV 942

Query: 419 YSIDLNGRNETLINT 433
           + +   G  +  +  
Sbjct: 943 WDL-ATGEEQRTLTG 956



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 57/340 (16%), Positives = 109/340 (32%), Gaps = 51/340 (15%)

Query: 82   ISQDSFKQKITNPDSIPRFQDW---------NSLGAQVLVTGRVIKEGKDRLRVE----- 127
            +S     Q + +       + W            G    VTG V      +  V      
Sbjct: 922  VSISPDGQTVVSASYDHTLKVWDLATGEEQRTLTGHTSTVTG-VSISPDGQTVVSASWGK 980

Query: 128  -FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              ++WD+   ++                 HT  + +Y       G          ++VVS
Sbjct: 981  TLKVWDLATGEE-----------QRTLTGHT--NSVYGVSISPDG----------QTVVS 1017

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G    +L V D      +         ++    SP+ Q V   + D      + + D   
Sbjct: 1018 GSSDKTLKVWDLATGEEQRTLTGHTNSVYGVSISPDGQTVVSGSLDK----TLKVWDLAT 1073

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINI 305
                + +    S +     S +G+  ++S   D+ + ++  DL +   +R LT       
Sbjct: 1074 GEEQRTLTGHTSPVEGVSISPDGQT-VVSGSWDKTLKVW--DLATGEEQRTLTGHTNSVY 1130

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              S SPD   +V  S     + L V      +++R       S      SP G  +  + 
Sbjct: 1131 GVSISPDGQTVVSGSS---DKTLKVWDLATGEEQRTLTGHTVSVRSVSISPDGQTVV-SG 1186

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            F  +   +  +     Q  L     ++   + SP G++++
Sbjct: 1187 FWDKTLKVWDLATGEEQHTLTGHTDSVTGVSISPDGQTVV 1226



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 87/246 (35%), Gaps = 20/246 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++VVSG +  +L V D      +         +     SP+ Q V   ++D      + +
Sbjct: 1055 QTVVSGSLDKTLKVWDLATGEEQRTLTGHTSPVEGVSISPDGQTVVSGSWDK----TLKV 1110

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       + +    + +     S +G+  ++S   D+ + ++  DL +   +R LT  
Sbjct: 1111 WDLATGEEQRTLTGHTNSVYGVSISPDGQT-VVSGSSDKTLKVW--DLATGEEQRTLTGH 1167

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S S SPD   +V        + L V      +++        S      SP G  
Sbjct: 1168 TVSVRSVSISPDGQTVV---SGFWDKTLKVWDLATGEEQHTLTGHTDSVTGVSISPDGQT 1224

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +    +      + V       E +    +   Q    +  GR++I      GD G +LY
Sbjct: 1225 VVSGSWDKT---LKVWDLATGMEVMSFTGEGGFQCCEIALDGRTII-----AGDAGGQLY 1276

Query: 420  SIDLNG 425
             + L G
Sbjct: 1277 FLRLEG 1282


>gi|326801004|ref|YP_004318823.1| peptidase S41 [Sphingobacterium sp. 21]
 gi|326551768|gb|ADZ80153.1| peptidase S41 [Sphingobacterium sp. 21]
          Length = 1090

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 87/253 (34%), Gaps = 34/253 (13%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
            +K  L V      + +    S    L  P  SP+ + + +      ++ RV    +   
Sbjct: 7   NLKFLLAVFFFLSYSYQSQAQSEALWLRYPAISPDGKTIVFGY--QGNLYRV----SASG 60

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A   +    S  + P +S +G+    +  ++   D+Y +      + RLT     +   
Sbjct: 61  GAATALTVGSSHSMMPVWSRDGQFIAFANDRNGNFDVYVMPASGGKSTRLTYNSANDYPY 120

Query: 308 SYSPDSSQIVFESDREGK------------EQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            +S D+ +++F S R+              + LY +  NG     +S     +     ++
Sbjct: 121 DFSIDNKEVIFGSARQAPAESTRFPSLRLFQNLYRVTINGGRPLLVSAAGIENA---HFN 177

Query: 356 PQGDLIAF------------TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGR 402
             G L+ F               S     I +     +    L  E+   + P +S  G+
Sbjct: 178 QDGSLLVFQDRKGYEDPWRKHHTSSVTRDIWLYNLRTNTYEALTNEEIEHREPVFSHDGQ 237

Query: 403 SLIFSRKKDGDTG 415
            + +  +KDG   
Sbjct: 238 FVYYLNEKDGTLN 250



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 53/345 (15%), Positives = 115/345 (33%), Gaps = 65/345 (18%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISD------------DIYQSITGEKGDFNSRIL---- 178
           D   ++ +        WRK  H  S             + Y+++T E+ +    +     
Sbjct: 179 DGSLLVFQDRKGYEDPWRK--HHTSSVTRDIWLYNLRTNTYEALTNEEIEHREPVFSHDG 236

Query: 179 -FV----SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA---- 229
            FV     +     + K  + +   D    + LT      +     S +   +A+     
Sbjct: 237 QFVYYLNEKDGTLNLYKKGIRLRIAD----QQLTHFTKNPVRHLSISND-NTLAFTQDGS 291

Query: 230 --TYDDEDILRVYLMDTRIDRAPKRIGNFR--SMILAPRFSSNGKRALISVQKDEAMDIY 285
             T  +    +   +   +D       N      I     S +GK+     +     +++
Sbjct: 292 IYTLKEGGEPKKLTVVIAVDNGNALASNVPLNGQISQFELSPDGKQIAYVSRG----ELF 347

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNGS----- 336
              ++ + T+R+TNT        +SPD   +++ ++R     G  Q  ++    S     
Sbjct: 348 VTSVEGDFTKRITNTADQERMVKWSPDGKTLIYAAERGRNGWGIYQSSILNQEESYFFNA 407

Query: 337 ----DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
               ++  I+   +   F P +SP G  +A+ +       + V   +  +   L+   + 
Sbjct: 408 TVLKEEPLIT--GKTDNFAPKFSPDGKSVAYIEERN---VLKVYNINTKKTVELLPKGHN 462

Query: 393 QAPT-------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +         WSP  + L+   ++     S +  I  +G  E  
Sbjct: 463 HSYADGDWGFEWSPDSKWLLVDDQRGYFFNSNVALIKADGTAEIR 507



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 91/307 (29%), Gaps = 81/307 (26%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + VM   G     LT +     +   FS + ++V + +              R+ 
Sbjct: 92  NGNFDVYVMPASGGKSTRLTYNSAN-DYPYDFSIDNKEVIFGSARQAPAESTRFPSLRLF 150

Query: 248 RAPKRIGNFRS--------MILAPRFSSNGKRALISVQKDE------------AMDIYSV 287
           +   R+              I    F+ +G   +   +K                DI+  
Sbjct: 151 QNLYRVTINGGRPLLVSAAGIENAHFNQDGSLLVFQDRKGYEDPWRKHHTSSVTRDIWLY 210

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-------------- 333
           +L++N  E LTN    +    +S D   + + ++++G   LY                  
Sbjct: 211 NLRTNTYEALTNEEIEHREPVFSHDGQFVYYLNEKDGTLNLYKKGIRLRIADQQLTHFTK 270

Query: 334 --------------------------NGSDQKRIS--------------QDKEASYFDPV 353
                                      G + K+++                         
Sbjct: 271 NPVRHLSISNDNTLAFTQDGSIYTLKEGGEPKKLTVVIAVDNGNALASNVPLNGQISQFE 330

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDG 412
            SP G  IA+         + V   +G   + +   ++ +    WSP G++LI++ ++ G
Sbjct: 331 LSPDGKQIAYVSRG----ELFVTSVEGDFTKRITNTADQERMVKWSPDGKTLIYAAER-G 385

Query: 413 DTGSKLY 419
             G  +Y
Sbjct: 386 RNGWGIY 392


>gi|282880946|ref|ZP_06289637.1| WD40-like protein [Prevotella timonensis CRIS 5C-B1]
 gi|281305169|gb|EFA97238.1| WD40-like protein [Prevotella timonensis CRIS 5C-B1]
          Length = 1068

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 64/303 (21%), Positives = 115/303 (37%), Gaps = 42/303 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ E G FN     V +  V    K  +         +RYL+ +++  +    +S +
Sbjct: 226 FYYLSEEDGTFN-----VYKRGVKSADKTQI--THHTKHPVRYLSVAQNGRIC---YSYD 275

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +            + V +   R D   KR  N          S NGK     +  D   
Sbjct: 276 GEIYTQMGSAAPQKVNVSITADRNDIDLKRQINSWGATEI-ALSPNGKEIGFVLHGD--- 331

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y  +++   T+++T+T     S  +SPD   IV+ S+REG  Q+Y        +K+ +
Sbjct: 332 -VYVTNIEYKTTKQITDTPEQERSIEFSPDGLAIVYASEREGLWQIYQTTMKNKAEKQFA 390

Query: 343 QDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
              +           + F P +SP G  IAF +  G    + V+     + R +++   +
Sbjct: 391 YATDLQEERLIHSAYTSFQPQYSPDGKSIAFFENRGT---LKVLDVKSKKVRTVMDGKYV 447

Query: 393 QAPT-------WSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNET--LINTPAYASDP 440
            + +       WSP  + LI      G  G     +  ID  G+     L  +   A + 
Sbjct: 448 YSYSDGDIWFEWSPDSKWLI--SNYIGTGGWNNQDIALIDAEGKKPIYNLTQSGYNAGNG 505

Query: 441 QWV 443
           +WV
Sbjct: 506 KWV 508



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 70/201 (34%), Gaps = 28/201 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G+    S + D    +++V        +LT+    +    +SPD  +I F S RE
Sbjct: 29  SISPDGQTIAFSYKGD----VFTVPASGGQARQLTSNAAYDSYPIWSPDGKKIAFASSRE 84

Query: 324 GKEQLYVMQSNGSDQKRIS-----------QDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           G   +YVM   G + KR++           +D E   F     P    I F      +  
Sbjct: 85  GSLDIYVMDKFGGEPKRLTTRSTNETPIAWRDNEHILFSAAIMPTAKSIFFASSQFPQ-- 142

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLYSIDL 423
           +  +   G + + L    N++  + +  G  L          F +         ++ ++ 
Sbjct: 143 VYEVNLKGDRPK-LFSVVNMEDLSINQKGEILYHDKKGYEDPFRKHHRSPITRDIW-LNQ 200

Query: 424 NGRNETLINTPAYASDPQWVG 444
           NG    L         P+W  
Sbjct: 201 NGNFSKLTTFNGEDRTPRWAP 221



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 92/248 (37%), Gaps = 37/248 (14%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            S    +     SP+ Q +A++     D+  V           +++ +  +    P +S 
Sbjct: 19  QSNPLWMRHTSISPDGQTIAFSY--KGDVFTV----PASGGQARQLTSNAAYDSYPIWSP 72

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI------------SASYSPDSSQ 315
           +GK+   +  ++ ++DIY +D      +RLT                   SA+  P +  
Sbjct: 73  DGKKIAFASSREGSLDIYVMDKFGGEPKRLTTRSTNETPIAWRDNEHILFSAAIMPTAKS 132

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-----------T 364
           I F S +    Q+Y +   G   K  S     +  D   + +G+++              
Sbjct: 133 IFFASSQ--FPQVYEVNLKGDRPKLFSVV---NMEDLSINQKGEILYHDKKGYEDPFRKH 187

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             S     I +  ++G+  +L   +   + P W+P G S  +  ++DG     +Y   + 
Sbjct: 188 HRSPITRDIWL-NQNGNFSKLTTFNGEDRTPRWAPDGTSFYYLSEEDGTF--NVYKRGVK 244

Query: 425 GRNETLIN 432
             ++T I 
Sbjct: 245 SADKTQIT 252



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 48/384 (12%), Positives = 108/384 (28%), Gaps = 136/384 (35%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  +  +   G   R LT S       P +SP+ +K+A+A+  +   L +Y+MD +  
Sbjct: 40  SYKGDVFTVPASGGQARQLT-SNAAYDSYPIWSPDGKKIAFASSREGS-LDIYVMD-KFG 96

Query: 248 RAPKRIGNFRSMI------------LAPRFSSNGKRALISVQKDEAMDIYSVDLQS---- 291
             PKR+    +               +       K    +  +     +Y V+L+     
Sbjct: 97  GEPKRLTTRSTNETPIAWRDNEHILFSAAIMPTAKSIFFASSQ--FPQVYEVNLKGDRPK 154

Query: 292 -----------------------------------------------NATERLTNTLFIN 304
                                                              +LT     +
Sbjct: 155 LFSVVNMEDLSINQKGEILYHDKKGYEDPFRKHHRSPITRDIWLNQNGNFSKLTTFNGED 214

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK------------------- 345
            +  ++PD +   + S+ +G   +Y      +D+ +I+                      
Sbjct: 215 RTPRWAPDGTSFYYLSEEDGTFNVYKRGVKSADKTQITHHTKHPVRYLSVAQNGRICYSY 274

Query: 346 ----------------------------------EASYFDPVWSPQGDLIAFTKFSGEKF 371
                                                  +   SP G  I F        
Sbjct: 275 DGEIYTQMGSAAPQKVNVSITADRNDIDLKRQINSWGATEIALSPNGKEIGFVLHGD--- 331

Query: 372 AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG----------DTGSKLYS 420
            + V   +    + + +    + +  +SP G +++++ +++G          +   K ++
Sbjct: 332 -VYVTNIEYKTTKQITDTPEQERSIEFSPDGLAIVYASEREGLWQIYQTTMKNKAEKQFA 390

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
              + + E LI++   +  PQ+  
Sbjct: 391 YATDLQEERLIHSAYTSFQPQYSP 414



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 5/121 (4%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                 F+P++SP+ + +A+        +L V     R     K + ++    +   +S 
Sbjct: 402 HSAYTSFQPQYSPDGKSIAFFENRGTLKVLDVKSKKVRTVMDGKYVYSYSDGDIWFEWSP 461

Query: 268 NGKRALISVQKDE---AMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDRE 323
           + K  + +          DI  +D +       LT + +   +  +      I+F+SDR 
Sbjct: 462 DSKWLISNYIGTGGWNNQDIALIDAEGKKPIYNLTQSGYNAGNGKWVLGGKAIIFQSDRA 521

Query: 324 G 324
           G
Sbjct: 522 G 522


>gi|198276608|ref|ZP_03209139.1| hypothetical protein BACPLE_02804 [Bacteroides plebeius DSM 17135]
 gi|198270133|gb|EDY94403.1| hypothetical protein BACPLE_02804 [Bacteroides plebeius DSM 17135]
          Length = 1083

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 89/242 (36%), Gaps = 40/242 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V           +++    +    P +S +G++   +  
Sbjct: 29  SISPDGSTIAFCY--KGDIYTV----PSTGGNARQLTTNPAYDTHPIWSPDGQQIAFASA 82

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYS------------PDSSQIVFESDREGK 325
           +  +MDIY V       +RLT         ++S            PD++ + F S +   
Sbjct: 83  RQGSMDIYIVSKDGGVPKRLTTHSGNETPVTFSDATHILFKANLMPDATDLSFPSAQ--F 140

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------------FAI 373
            Q+Y + + G   K  S        D   +  G  + +    G +              I
Sbjct: 141 PQIYEVSTQGGRPKLYSSLP---MEDISVAQDGTTLLYHDQKGYEDPWRKHHTSSITRDI 197

Query: 374 GVMKKDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            + KK+ ++    ++   +   + P WS   +S  +  +K+G     ++  +LNG NET 
Sbjct: 198 WISKKENNERTYQKITSFNGEDRNPIWSNDNQSFYYLSEKNGSF--NIFKCNLNGSNETQ 255

Query: 431 IN 432
           + 
Sbjct: 256 LT 257



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 67/204 (32%), Gaps = 31/204 (15%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G       + D    IY+V        +LT     +    +SPD  QI F S R+
Sbjct: 29  SISPDGSTIAFCYKGD----IYTVPSTGGNARQLTTNPAYDTHPIWSPDGQQIAFASARQ 84

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF-A 372
           G   +Y++  +G   KR++     +     +S     I F            F   +F  
Sbjct: 85  GSMDIYIVSKDGGVPKRLTT-HSGNETPVTFS-DATHILFKANLMPDATDLSFPSAQFPQ 142

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF----------SRKKDGDTGSKLYSI- 421
           I  +   G + + L     ++  + +  G +L++           +         ++   
Sbjct: 143 IYEVSTQGGRPK-LYSSLPMEDISVAQDGTTLLYHDQKGYEDPWRKHHTSSITRDIWISK 201

Query: 422 --DLNGRNETLINTPAYASDPQWV 443
             +     + + +      +P W 
Sbjct: 202 KENNERTYQKITSFNGEDRNPIWS 225



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 57/312 (18%), Positives = 105/312 (33%), Gaps = 38/312 (12%)

Query: 163 YQSITGEKGDFNSRILF----VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           YQ IT   G+  + I          +       ++   + +G+N   LT      +    
Sbjct: 209 YQKITSFNGEDRNPIWSNDNQSFYYLSEKNGSFNIFKCNLNGSNETQLTHHTQHPVRFLS 268

Query: 219 FSPNQ------QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKR 271
            S N       +   Y   + +   +V +         +     +S        S NGK 
Sbjct: 269 SSKNGLLCYGYEGEIYTVKEGQQPQKVAISIVTDQTETELAHQIKSSGATEIAVSPNGKE 328

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
               +  D    ++    +   T+++T+T     S  ++PD   IV+ S+R G  Q+Y  
Sbjct: 329 VAFILHGD----VFVTSTEYKTTKQITDTPEQERSIDFAPDGRSIVYASERNGLWQIYQS 384

Query: 332 QSNGSDQKRISQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                ++K  +   +           + F P +SP G  IAF +       + V+     
Sbjct: 385 TLTKEEEKLFTYATDIKEEQLTHSQVTSFQPQYSPDGKQIAFLENRTT---LRVLDLKDK 441

Query: 382 QERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLI 431
             R  ++     + +       WSP  + L+      G   +    L S   NG    L 
Sbjct: 442 SVRTAMDGKYEYSYSDGDQWFQWSPDSKWLLCGYIGTGGWNNNDVALVSASGNGEIHNLT 501

Query: 432 NTPAYASDPQWV 443
            +    S+ +WV
Sbjct: 502 ESGYTDSNAKWV 513



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 48/395 (12%), Positives = 113/395 (28%), Gaps = 143/395 (36%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G N R LT         P +SP+ Q++A+A+      + +Y++ ++   
Sbjct: 41  YKGDIYTVPSTGGNARQLTT-NPAYDTHPIWSPDGQQIAFASARQGS-MDIYIV-SKDGG 97

Query: 249 APKRIGNFRSMILAPRFS------------SNGKRALI----------SVQKDEAMDIYS 286
            PKR+           FS             +                   +     +YS
Sbjct: 98  VPKRLTTHSGNETPVTFSDATHILFKANLMPDATDLSFPSAQFPQIYEVSTQGGRPKLYS 157

Query: 287 --------VDLQSNAT------------------------------------ERLTNTLF 302
                   V                                           +++T+   
Sbjct: 158 SLPMEDISVAQDGTTLLYHDQKGYEDPWRKHHTSSITRDIWISKKENNERTYQKITSFNG 217

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS------- 355
            + +  +S D+    + S++ G   ++    NGS++ +++   +        S       
Sbjct: 218 EDRNPIWSNDNQSFYYLSEKNGSFNIFKCNLNGSNETQLTHHTQHPVRFLSSSKNGLLCY 277

Query: 356 ----------------------------------------------PQGDLIAFTKFSGE 369
                                                         P G  +AF      
Sbjct: 278 GYEGEIYTVKEGQQPQKVAISIVTDQTETELAHQIKSSGATEIAVSPNGKEVAFILHGD- 336

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG----------DTGSKL 418
              + V   +    + + +    + +  ++P GRS++++ +++G              KL
Sbjct: 337 ---VFVTSTEYKTTKQITDTPEQERSIDFAPDGRSIVYASERNGLWQIYQSTLTKEEEKL 393

Query: 419 YSIDLNGRNETLINT------PAYASDPQWVGFMD 447
           ++   + + E L ++      P Y+ D + + F++
Sbjct: 394 FTYATDIKEEQLTHSQVTSFQPQYSPDGKQIAFLE 428



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 32/90 (35%), Gaps = 7/90 (7%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKK 410
              SP G  IAF         I  +   G   R L    +    P WSP G+ + F+  +
Sbjct: 28  CSISPDGSTIAFCYKGD----IYTVPSTGGNARQLTTNPAYDTHPIWSPDGQQIAFASAR 83

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            G     +Y +  +G     + T +    P
Sbjct: 84  QGSM--DIYIVSKDGGVPKRLTTHSGNETP 111



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 63/373 (16%), Positives = 112/373 (30%), Gaps = 50/373 (13%)

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW-DVK--DRKQI 139
            Q      +T+           S GA  +    V   GK    V F L  DV     +  
Sbjct: 292 PQKVAISIVTDQTETELAHQIKSSGATEIA---VSPNGK---EVAFILHGDVFVTSTEYK 345

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
             K+   +P   R I            +   G +                +  L     D
Sbjct: 346 TTKQITDTPEQERSIDFAPDGRSIVYASERNGLWQ------IYQSTLTKEEEKLFTYATD 399

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRS 258
               +          F+P++SP+ +++A+        +L +     R     K   ++  
Sbjct: 400 IKEEQ--LTHSQVTSFQPQYSPDGKQIAFLENRTTLRVLDLKDKSVRTAMDGKYEYSYSD 457

Query: 259 MILAPRFSSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSS 314
                ++S + K  L            D+  V          LT + + + +A +  D  
Sbjct: 458 GDQWFQWSPDSKWLLCGYIGTGGWNNNDVALVSASGNGEIHNLTESGYTDSNAKWVLDGK 517

Query: 315 QIVFESDREGK---------EQLYVMQSNGSDQKRISQDKE---------------ASYF 350
            +++ESDR G            +Y+M  +    +R   +KE                   
Sbjct: 518 AMIWESDRAGYRSHGSWGAESDVYIMFFDLEAYERFRLNKEELALVKEKEDKEKEKDKQD 577

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           D     +       K +   F +   +      RL V  S+L     SP G  L +  + 
Sbjct: 578 DKKKEKKEKSEKEKKVTPLTFDLENCRD--RIIRLTVNSSHLGDAVLSPDGDKLYY--QA 633

Query: 411 DGDTGSKLYSIDL 423
             + G+ L+  DL
Sbjct: 634 SFEDGADLWVHDL 646



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%), Gaps = 7/50 (14%)

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           + SP G ++ F  K        +Y++   G N   + T PAY + P W  
Sbjct: 29  SISPDGSTIAFCYK------GDIYTVPSTGGNARQLTTNPAYDTHPIWSP 72


>gi|94968180|ref|YP_590228.1| peptidase S9, prolyl oligopeptidase active site region [Candidatus
           Koribacter versatilis Ellin345]
 gi|94550230|gb|ABF40154.1| peptidase S9, prolyl oligopeptidase active site region [Candidatus
           Koribacter versatilis Ellin345]
          Length = 750

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 50/343 (14%), Positives = 111/343 (32%), Gaps = 45/343 (13%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDD----IYQSITGEKGDFNSRILFVSESVVSGII 189
              +Q+     +         A TIS+D    +Y   T   G  +S     +   ++   
Sbjct: 122 FKARQL---THYHGDDGQPIAALTISNDGKTILYARGTEVNGGGSS----ANPQSLTAGA 174

Query: 190 KNSLCVMDRDGANIRYLTPSR--DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
           K  +  +D      R L      ++   + + SP+ +  A+A     +   + L      
Sbjct: 175 KQQVFAIDVAKGEPRTLGDMGCGEEGCEDIQISPDGKWAAWA-----NKTGILLAPIDGK 229

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  K++   R  +  PR+S +GKR    V + +   I   ++       L  +   +   
Sbjct: 230 QQAKKLNELRGELSEPRWSPDGKRLAFVVNRTDHSFIGLQEIGGTEVRYLAPSTNRDDLP 289

Query: 308 SYSPDSSQIVFESD------------REGKEQLYVMQSNGSDQKRISQDKEAS------Y 349
            +S D  QI F               R     ++V  ++ +  K +    +        +
Sbjct: 290 RWSADGKQIAFVRQPGVQAKLPLIPVRPHPWSIWVADASTAQGKEVWHSGDQPRDSFPMF 349

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSR 408
               +   GD I F      +  +  +   G +   L +    ++  T S   + + +S 
Sbjct: 350 IGTSFYFAGDRIVFVSTRDNRNHLYSVPAAGGEATQLTQGNFEVEDVTLSKDQKWITYSS 409

Query: 409 KK-----DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            +       +    L+ +   G     +++       +W   +
Sbjct: 410 NEYTSDSKDEDRRHLWRVPATGGQRQQLSSGETI---EWSPTL 449


>gi|333030832|ref|ZP_08458893.1| peptidase S41 [Bacteroides coprosuis DSM 18011]
 gi|332741429|gb|EGJ71911.1| peptidase S41 [Bacteroides coprosuis DSM 18011]
          Length = 1079

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 70/202 (34%), Gaps = 28/202 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    IY V        +LT     +    +SPD ++I F S+RE
Sbjct: 30  AISPDGSEIAFTYKGD----IYKVPSSGGKAIQLTTHPAHDTQPVWSPDGNKIAFASNRE 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----SGEKF----AIG 374
           G   +++M S G    R++      Y  P+     + + +T           F     + 
Sbjct: 86  GGFDIHLMSSRGGAPTRLTTHSANEY--PIVFRDNEHVLYTANIMADVKDGHFPSFSQVY 143

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF----------SRKKDGDTGSKLYSIDLN 424
            +  +G +   L     L+  ++ P+   +++           +         ++  DLN
Sbjct: 144 EVDTEGKRP-ALFSSMPLEDISFHPTENKILYHDKKGYEDPWRKHHQSSIARDIWLCDLN 202

Query: 425 GRN--ETLINTPAYASDPQWVG 444
           G      L N      +P W  
Sbjct: 203 GERTYTKLTNFRGEDRNPTWTA 224



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 94/263 (35%), Gaps = 39/263 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           LC+    GA+ +         +     SP+  ++A+      DI +V            +
Sbjct: 9   LCLSFAVGASAQ----DTPLWMRYAAISPDGSEIAFTY--KGDIYKV----PSSGGKAIQ 58

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +    +    P +S +G +   +  ++   DI+ +  +  A  RLT             D
Sbjct: 59  LTTHPAHDTQPVWSPDGNKIAFASNREGGFDIHLMSSRGGAPTRLTTHSANEY-PIVFRD 117

Query: 313 SSQIVFESD-----REGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +  +++ ++     ++G      Q+Y + + G   KR +        D  + P  + I +
Sbjct: 118 NEHVLYTANIMADVKDGHFPSFSQVYEVDTEG---KRPALFSSMPLEDISFHPTENKILY 174

Query: 364 ------------TKFSGEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                          S     I +   +G  +  +L       + PTW+  G S  +  +
Sbjct: 175 HDKKGYEDPWRKHHQSSIARDIWLCDLNGERTYTKLTNFRGEDRNPTWTADGNSFFYLNE 234

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           +DG     +Y  +L+G ++  + 
Sbjct: 235 EDGSF--NVYKRNLDGSDKKQLT 255



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 80/216 (37%), Gaps = 30/216 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN +++A+    D     +++         ++I N         FS +G+  L + +
Sbjct: 319 SVSPNGKEIAFIIRGD-----IFVTSIEYGT-TRQITNTPEQERDVSFSPDGRSLLYAAE 372

Query: 278 KDEAMDIYSVDLQ-----------SNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           ++ A +IY   L            S   E+LT++   +    YSPD   + F  DR    
Sbjct: 373 RNGAWNIYQTTLDIKDEKEFIYAQSFTEEQLTDSDKASFQPLYSPDGKSVAFLEDRT--- 429

Query: 327 QLYVMQSNGSDQKRISQDKEASYF-----DPVWSPQGDLIA--FTKFSG-EKFAIGVMKK 378
            L V+  +    K +   K    +        W+P    +   +    G       ++K 
Sbjct: 430 TLKVLNLSNKKSKTVLDGKFNYSYSDGDQWFQWAPDSKWLLTQYIGIGGWNNVDAALVKA 489

Query: 379 DGSQE-RLLVEDS-NLQAPTWSPSGRSLIFSRKKDG 412
           DGS E   L E       P +   G+++++   + G
Sbjct: 490 DGSGELTNLTESGYTDGNPRFVQDGKAMLWFSDRAG 525



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 59/302 (19%), Positives = 121/302 (40%), Gaps = 40/302 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  +  E G FN     V +  + G  K  L  + +    +R+LT S+  +L    F  +
Sbjct: 229 FFYLNEEDGSFN-----VYKRNLDGSDKKQLTHLKK--HPVRFLTQSKAGVLC---FVYD 278

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +        +   +R+ ++  + + A K   NFR+       S NGK     ++ D   
Sbjct: 279 GEIYTLREGAEPQKVRIEIITDQQESAVKHF-NFRTGAKEMSVSPNGKEIAFIIRGD--- 334

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--- 339
            I+   ++   T ++TNT       S+SPD   +++ ++R G   +Y    +  D+K   
Sbjct: 335 -IFVTSIEYGTTRQITNTPEQERDVSFSPDGRSLLYAAERNGAWNIYQTTLDIKDEKEFI 393

Query: 340 --------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                   +++   +AS F P++SP G  +AF +       + V+     + + +++   
Sbjct: 394 YAQSFTEEQLTDSDKAS-FQPLYSPDGKSVAFLEDRTT---LKVLNLSNKKSKTVLDGKF 449

Query: 392 LQAPT-------WSPSGRSLIFSRKKDGDTG---SKLYSIDLNGRNETLINTPAYASDPQ 441
             + +       W+P  + L+      G      + L   D +G    L  +     +P+
Sbjct: 450 NYSYSDGDQWFQWAPDSKWLLTQYIGIGGWNNVDAALVKADGSGELTNLTESGYTDGNPR 509

Query: 442 WV 443
           +V
Sbjct: 510 FV 511



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 60/355 (16%), Positives = 112/355 (31%), Gaps = 118/355 (33%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  +  +   G     LT        +P +SP+  K+A+A+  +     ++LM +R  
Sbjct: 41  TYKGDIYKVPSSGGKAIQLTTHPAH-DTQPVWSPDGNKIAFASNREGG-FDIHLMSSR-G 97

Query: 248 RAPKRIGNFRSMIL------------------------APRFS------SNGKR-ALISV 276
            AP R+    +                            P FS      + GKR AL S 
Sbjct: 98  GAPTRLTTHSANEYPIVFRDNEHVLYTANIMADVKDGHFPSFSQVYEVDTEGKRPALFSS 157

Query: 277 -------------------------------QKDEAMDIYSVDLQS-NATERLTNTLFIN 304
                                          Q   A DI+  DL       +LTN    +
Sbjct: 158 MPLEDISFHPTENKILYHDKKGYEDPWRKHHQSSIARDIWLCDLNGERTYTKLTNFRGED 217

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS--------- 355
            + +++ D +   + ++ +G   +Y    +GSD+K+++  K+        S         
Sbjct: 218 RNPTWTADGNSFFYLNEEDGSFNVYKRNLDGSDKKQLTHLKKHPVRFLTQSKAGVLCFVY 277

Query: 356 ------------PQGDLI----------------------AFTKFSGEKF------AIGV 375
                       PQ   I                           +G++        I V
Sbjct: 278 DGEIYTLREGAEPQKVRIEIITDQQESAVKHFNFRTGAKEMSVSPNGKEIAFIIRGDIFV 337

Query: 376 MKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              +    R +      +   ++SP GRSL+++ +++G     +Y   L+ ++E 
Sbjct: 338 TSIEYGTTRQITNTPEQERDVSFSPDGRSLLYAAERNGAW--NIYQTTLDIKDEK 390



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 45/123 (36%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
               D+  F+P +SP+ + VA+        +L +    ++     K   ++       ++
Sbjct: 403 LTDSDKASFQPLYSPDGKSVAFLEDRTTLKVLNLSNKKSKTVLDGKFNYSYSDGDQWFQW 462

Query: 266 SSNGKRALISVQKDE---AMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           + + K  L           +D   V          LT + + + +  +  D   +++ SD
Sbjct: 463 APDSKWLLTQYIGIGGWNNVDAALVKADGSGELTNLTESGYTDGNPRFVQDGKAMLWFSD 522

Query: 322 REG 324
           R G
Sbjct: 523 RAG 525


>gi|163846645|ref|YP_001634689.1| peptidase S9 prolyl oligopeptidase [Chloroflexus aurantiacus
           J-10-fl]
 gi|222524445|ref|YP_002568916.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Chloroflexus sp. Y-400-fl]
 gi|163667934|gb|ABY34300.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Chloroflexus aurantiacus J-10-fl]
 gi|222448324|gb|ACM52590.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Chloroflexus sp. Y-400-fl]
          Length = 678

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 56/342 (16%), Positives = 118/342 (34%), Gaps = 85/342 (24%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +++V+   V    +  + ++  DG  IR  T  +     +PR+SP+ + +A+ +  D++ 
Sbjct: 34  VVWVTVDRVGNGYRRHIVLVATDGGQIRRFTRGKQ--DRQPRWSPDGRWIAFVSNRDDER 91

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---------------------- 274
            ++Y++        ++I +  +    P +S +G+                          
Sbjct: 92  GQIYIIPVD-GGEARQITSHPNGASDPAWSPDGRYIAFLAPVNAEEQAREDAGETPPPPA 150

Query: 275 -----SVQKDEAMDIYSVDLQSNATERL-------------------------------- 297
                   +++      + +      +L                                
Sbjct: 151 DAWEARRSREQRQHEEEMRVDPRVITKLPYRSGTSYFDDRRRHIYLVEVTDDDQPSTPRR 210

Query: 298 -TNTLFINISASYSPDSSQIVFESDRE-------GKEQLYVMQSNGSDQKRISQDKEASY 349
            T+      +  + P    ++  + R+           +  +  +GS    ++     SY
Sbjct: 211 LTSGDIHYSAPVWMPAGDALLSTATRDPEADSLFAYYDVMCVPLDGSSPHPLTSSGF-SY 269

Query: 350 FDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGR 402
           FDP  SP G  IAF + +     GE   + ++   G +   L    D N++   W P G+
Sbjct: 270 FDPRPSPDGTQIAFLRLNESRLLGEGKRVAIIPATGGEPHDLTAHTDLNVEQFHWQPDGQ 329

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRN-----ETLINTPAYASD 439
            ++FS    GD  + +Y I L G        TL+  P   S+
Sbjct: 330 GVLFSAGWRGD--AHVYQIGLPGTPTYRNGATLVGGPRIVSE 369



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 95/267 (35%), Gaps = 32/267 (11%)

Query: 212 QILFEPRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             L +PR SP+ + VA          +  R +++    D    R          PR+S +
Sbjct: 18  GWLEDPRLSPDGRYVAVVWVTVDRVGNGYRRHIVLVATDGGQIRRFTRGKQDRQPRWSPD 77

Query: 269 GKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF----ESDRE 323
           G+       +D+    IY + +      ++T+        ++SPD   I F     ++ +
Sbjct: 78  GRWIAFVSNRDDERGQIYIIPVDGGEARQITSHPNGASDPAWSPDGRYIAFLAPVNAEEQ 137

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAIGVM 376
            +E         +D     + +E    +        +I         + F   +  I ++
Sbjct: 138 AREDAGETPPPPADAWEARRSREQRQHEEEMRVDPRVITKLPYRSGTSYFDDRRRHIYLV 197

Query: 377 -----KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-----KLYSIDLNGR 426
                 +  +  RL   D +  AP W P+G +L+ +  +D +  S      +  + L+G 
Sbjct: 198 EVTDDDQPSTPRRLTSGDIHYSAPVWMPAGDALLSTATRDPEADSLFAYYDVMCVPLDGS 257

Query: 427 NETLINTPAY-------ASDPQWVGFM 446
           +   + +  +       + D   + F+
Sbjct: 258 SPHPLTSSGFSYFDPRPSPDGTQIAFL 284



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 74/224 (33%), Gaps = 19/224 (8%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA------ 281
           Y       I  V + D      P+R+ +      AP +   G   L +  +D        
Sbjct: 186 YFDDRRRHIYLVEVTDDDQPSTPRRLTSGDIHYSAPVWMPAGDALLSTATRDPEADSLFA 245

Query: 282 -MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF----ESDREG-KEQLYVMQSNG 335
             D+  V L  ++   LT++ F       SPD +QI F    ES   G  +++ ++ + G
Sbjct: 246 YYDVMCVPLDGSSPHPLTSSGFSYFDPRPSPDGTQIAFLRLNESRLLGEGKRVAIIPATG 305

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-----QERLLVEDS 390
            +   ++   + +     W P G  + F+        +  +   G+        L+    
Sbjct: 306 GEPHDLTAHTDLNVEQFHWQPDGQGVLFSAGWRGDAHVYQIGLPGTPTYRNGATLVGGPR 365

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            +        G  + F      D    L+    +G+   L    
Sbjct: 366 IVSEFDVGRDGT-IAFVAG-SADNPCDLFVRGADGQERRLTAIN 407



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 69/230 (30%), Gaps = 19/230 (8%)

Query: 175 SRILFVSESVVSGIIKNSLC---VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           +++ + S +      +  +    V D D  +      S D     P + P    +     
Sbjct: 176 TKLPYRSGTSYFDDRRRHIYLVEVTDDDQPSTPRRLTSGDIHYSAPVWMPAGDALLSTAT 235

Query: 232 DDEDILRVYLMD-----TRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEA 281
            D +   ++             +P  + +       PR S +G +        S    E 
Sbjct: 236 RDPEADSLFAYYDVMCVPLDGSSPHPLTSSGFSYFDPRPSPDGTQIAFLRLNESRLLGEG 295

Query: 282 MDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             +  +         LT    +N+    + PD   ++F +   G   +Y +   G+   R
Sbjct: 296 KRVAIIPATGGEPHDLTAHTDLNVEQFHWQPDGQGVLFSAGWRGDAHVYQIGLPGTPTYR 355

Query: 341 ---ISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLL 386
                        +      G  IAF   S +    + V   DG + RL 
Sbjct: 356 NGATLVGGPRIVSEFDVGRDGT-IAFVAGSADNPCDLFVRGADGQERRLT 404



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 50/147 (34%), Gaps = 4/147 (2%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLCVMDRDGANIRYLTPSRDQI 213
            H ++   +           ++I F+  +    + +   + ++   G     LT   D  
Sbjct: 259 PHPLTSSGFSYFDPRPSPDGTQIAFLRLNESRLLGEGKRVAIIPATGGEPHDLTAHTDLN 318

Query: 214 LFEPRFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           + +  + P+ Q V ++     D  + ++ L  T   R    +     ++       +G  
Sbjct: 319 VEQFHWQPDGQGVLFSAGWRGDAHVYQIGLPGTPTYRNGATLVGGPRIVSEFDVGRDGTI 378

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLT 298
           A ++   D   D++          RLT
Sbjct: 379 AFVAGSADNPCDLFVRGAD-GQERRLT 404



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 24/71 (33%), Gaps = 10/71 (14%)

Query: 386 LVEDSNLQAPTWSPSGRSLIF----SRKKDGDTGSKLYSIDLNGRNETLIN------TPA 435
           L E   L+ P  SP GR +        +        +  +  +G              P 
Sbjct: 14  LYELGWLEDPRLSPDGRYVAVVWVTVDRVGNGYRRHIVLVATDGGQIRRFTRGKQDRQPR 73

Query: 436 YASDPQWVGFM 446
           ++ D +W+ F+
Sbjct: 74  WSPDGRWIAFV 84


>gi|159897952|ref|YP_001544199.1| peptidase S9 prolyl oligopeptidase [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159890991|gb|ABX04071.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 682

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 104/287 (36%), Gaps = 58/287 (20%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATY-----------DDEDILRVYLMDTRIDRAP 250
           N +  +    + + + + SPN +++A+                 D     ++       P
Sbjct: 6   NWQATSLLELRFISDAQISPNGEQIAFVETWIEETTNKSGTRKPDYRSAIMLIQADGGIP 65

Query: 251 KRIG-NFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQ-SNATERLTNTLFINISA 307
           +R+  +      +PR+S +G +      +D     ++ +DL      ++LT+  +     
Sbjct: 66  QRMTFSVSGRDSSPRWSPDGSKLAFISTRDAGVAQLFVLDLARGGEAQQLTSLGYGVAEI 125

Query: 308 SYSPDSSQIVFESD-------------REGK-------------------EQLYVMQSNG 335
           ++ PDS  + F S              R+ K                    Q+++++  G
Sbjct: 126 NWRPDSQALAFISRGAKAKAQTHVESLRDEKIIERLPFKFDGVGYLQPEYAQIWLVEL-G 184

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVMKKDGSQERLLVED 389
            +  +I+ D+   + DP WSP G  +AF   S        +  + ++       R L   
Sbjct: 185 QEPNQIT-DQAFDHADPAWSPDGSELAFITVSRAELEHTRQADMYLLNVAAGTSRCLTNA 243

Query: 390 -SNLQAPTWSPSGRSLIFS---RKKDGDTGSKLYSIDLNGRNETLIN 432
              +  PTWSP G  + +    +     +   L+ +   G +  L++
Sbjct: 244 LGPVYHPTWSPDGSQIAYIGHDQHTGNASNEALWCVSRAGGDARLLS 290



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 104/308 (33%), Gaps = 66/308 (21%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                 ++++ ++  DG   + +T S       PR+SP+  K+A+ +  D  + +++++D
Sbjct: 46  TRKPDYRSAIMLIQADGGIPQRMTFSVSGRDSSPRWSPDGSKLAFISTRDAGVAQLFVLD 105

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------------------------- 277
                  +++ +    +    +  + +      +                          
Sbjct: 106 LARGGEAQQLTSLGYGVAEINWRPDSQALAFISRGAKAKAQTHVESLRDEKIIERLPFKF 165

Query: 278 ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES------DREGK 325
                 + E   I+ V+L      ++T+  F +   ++SPD S++ F +      +   +
Sbjct: 166 DGVGYLQPEYAQIWLVEL-GQEPNQITDQAFDHADPAWSPDGSELAFITVSRAELEHTRQ 224

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----SGEKFAIGVMKKDG 380
             +Y++       + ++ +     + P WSP G  IA+        +    A+  + + G
Sbjct: 225 ADMYLLNVAAGTSRCLT-NALGPVYHPTWSPDGSQIAYIGHDQHTGNASNEALWCVSRAG 283

Query: 381 SQERLLVEDSNL----------------QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              RLL                        P W  +G  +     +   T +  YS   +
Sbjct: 284 GDARLLSVGFEYGLENSVISDARIGRFPYRPYWRDNG--IYCLATRAARTRAYRYS---D 338

Query: 425 GRNETLIN 432
           G    L  
Sbjct: 339 GAMHELTP 346



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 54/320 (16%), Positives = 97/320 (30%), Gaps = 71/320 (22%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S++ F+S           L V+D           S    + E  + P+ Q +A+ +   +
Sbjct: 86  SKLAFISTR---DAGVAQLFVLDLARGGEAQQLTSLGYGVAEINWRPDSQALAFISRGAK 142

Query: 235 -----------------------------DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                                              +    + + P +I +       P +
Sbjct: 143 AKAQTHVESLRDEKIIERLPFKFDGVGYLQPEYAQIWLVELGQEPNQITDQAFDHADPAW 202

Query: 266 SSNGKRALIS------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +G            ++     D+Y +++ +  +  LTN L      ++SPD SQI + 
Sbjct: 203 SPDGSELAFITVSRAELEHTRQADMYLLNVAAGTSRCLTNALGPVYHPTWSPDGSQIAYI 262

Query: 320 SD-----REGKEQLYVMQSNGSDQKRISQDKEASY--------------FDPVWSPQGDL 360
                      E L+ +   G D + +S   E                 + P W   G  
Sbjct: 263 GHDQHTGNASNEALWCVSRAGGDARLLSVGFEYGLENSVISDARIGRFPYRPYWRDNGIY 322

Query: 361 -IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL----IFSRKKDGDTG 415
            +A        +       DG+   L  ED     P+ S   +SL     F+        
Sbjct: 323 CLATRAARTRAYRY----SDGAMHELTPED----NPSISGYSQSLNKRTAFTAGTATQLE 374

Query: 416 SKLYSIDLNGRNETLINTPA 435
           + LY  D +G    L +  A
Sbjct: 375 A-LYMGDADGSIHLLYDPNA 393



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/296 (12%), Positives = 86/296 (29%), Gaps = 48/296 (16%)

Query: 125 RVEFRLWDVKDR---KQIIGKKFFSSPASWR----------KIAHTISDDIYQSITGEKG 171
             +  + D+      +Q+    +  +  +WR          + A   +    +S+  EK 
Sbjct: 98  VAQLFVLDLARGGEAQQLTSLGYGVAEINWRPDSQALAFISRGAKAKAQTHVESLRDEKI 157

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
                  F             + +++  G     +T  +     +P +SP+  ++A+ T 
Sbjct: 158 IERLPFKF-DGVGYLQPEYAQIWLVEL-GQEPNQITD-QAFDHADPAWSPDGSELAFITV 214

Query: 232 -----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--QKDEAMD- 283
                +      +YL++       + + N    +  P +S +G +       Q       
Sbjct: 215 SRAELEHTRQADMYLLNVAAG-TSRCLTNALGPVYHPTWSPDGSQIAYIGHDQHTGNASN 273

Query: 284 --IYSVDLQSNATERLTNTLFINIS---------------ASYSPDSSQIVFESDREGKE 326
             ++ V         L+      +                  +  +   I   + R  + 
Sbjct: 274 EALWCVSRAGGDARLLSVGFEYGLENSVISDARIGRFPYRPYWRDNG--IYCLATRAART 331

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGS 381
           + Y           ++ +   S      S      AFT  +  +   + +   DGS
Sbjct: 332 RAYRYS--DGAMHELTPEDNPSISGYSQSLN-KRTAFTAGTATQLEALYMGDADGS 384


>gi|325919579|ref|ZP_08181591.1| amidohydrolase, imidazolonepropionase [Xanthomonas gardneri ATCC
           19865]
 gi|325549915|gb|EGD20757.1| amidohydrolase, imidazolonepropionase [Xanthomonas gardneri ATCC
           19865]
          Length = 1110

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 30/214 (14%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L  TR        G +  + ++PR   +G+        D   D+Y++D      + ++  
Sbjct: 64  LQATRRIAFETDEGTWMGLDVSPR---DGRLVF-----DLLGDLYTLDADGGRAKAISRG 115

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQGD 359
           L  +   ++SPD   I F SDR G E L+ M+ +G D ++++   + +    P W+P G 
Sbjct: 116 LGFDSQPTFSPDGRWIAFVSDRSGAENLWRMRPDGRDAQQLTFGDDDTVLVSPAWAPDGS 175

Query: 360 LIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNLQ---------APTWSPSGRSLIFSR 408
            +  ++F  S   + +     D S+   LV     +             SP GR L ++ 
Sbjct: 176 ALYASRFRWSVNDYELWRYGLDCSE--RLVAPVRAEGAGSEQSTLGAVVSPDGRQL-YAA 232

Query: 409 KKDGDTGS---KLYSI---DL-NGRNETLINTPA 435
           ++ GD  S   +L+SI   DL  G+ ET++  P 
Sbjct: 233 RRSGDKDSAELELWSIVRRDLATGKEETILPVPG 266



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 103/331 (31%), Gaps = 58/331 (17%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG-----ANIRYLTPSRDQILFEPRFS 220
           +       +   L+ S    S +    L     D      A +R      +Q       S
Sbjct: 165 LVSPAWAPDGSALYASRFRWS-VNDYELWRYGLDCSERLVAPVRAEGAGSEQSTLGAVVS 223

Query: 221 PNQQKVAYATYDDED-------ILRVYLMDTRIDRAPKRIG--------NFRSMILAPRF 265
           P+ +++ YA     D       +  +   D    +    +          F     +PR 
Sbjct: 224 PDGRQL-YAARRSGDKDSAELELWSIVRRDLATGKEETILPVPGVPGRRPFPGTYFSPRL 282

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIVFESD-- 321
           S +GK+   + ++     +    L +     +   +  + S   S+     +  F  D  
Sbjct: 283 SPDGKQLAYATRQQGQTGLRLRTLATGEDRWIAFPIAHDQSQAQSWQDLVPRYAFSRDGR 342

Query: 322 -----REGKEQLYVMQ-------------------SNGSDQKRISQDKEASYF-DPVWSP 356
                R G+ +   +                      G+D ++ +   +A    DP  SP
Sbjct: 343 ALLLSRNGRFERIALDREAPRAIPFIASVDLELGPLTGADIRQDTGPVQARLIQDPAVSP 402

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  +AF+       A+ +M  +      RL   D     P+W+P G++L +   + G+ 
Sbjct: 403 DGTRVAFSALG----ALYLMDMEDGALPKRLPTGDVPAFHPSWAPDGKALTYVTWEGGEG 458

Query: 415 GSKLYSIDLNGRNETLINTPA-YASDPQWVG 444
           G              L + P  Y + P +  
Sbjct: 459 GQVWALAPGAAAPRQLSHGPGAYYTHPVFTP 489



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 49/328 (14%), Positives = 106/328 (32%), Gaps = 56/328 (17%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            ++G +    +   +  +   +   L  +D DG   + ++        +P FSP+ + +A
Sbjct: 74  TDEGTWMGLDVSPRDGRLVFDLLGDLYTLDADGGRAKAISRGL-GFDSQPTFSPDGRWIA 132

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----DEAMD 283
           + +          +     D      G+  +++++P ++ +G     S  +    D  + 
Sbjct: 133 FVSDRSGAENLWRMRPDGRDAQQLTFGDDDTVLVSPAWAPDGSALYASRFRWSVNDYELW 192

Query: 284 IYSVDLQSNATERLTNTLFIN----ISASYSPDSSQIVFESDREGK--------EQLYVM 331
            Y +D        +      +    + A  SPD  Q+ + + R G           +   
Sbjct: 193 RYGLDCSERLVAPVRAEGAGSEQSTLGAVVSPDGRQL-YAARRSGDKDSAELELWSIVRR 251

Query: 332 QSNGSDQKRI--------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                 ++ I         +    +YF P  SP G  +A+      +  + +      ++
Sbjct: 252 DLATGKEETILPVPGVPGRRPFPGTYFSPRLSPDGKQLAYATRQQGQTGLRLRTLATGED 311

Query: 384 RLL----------VEDSNLQAP--TWSPSGRSLIFSRK----------KDGDTGSKLYSI 421
           R +           +      P   +S  GR+L+ SR           +       + S+
Sbjct: 312 RWIAFPIAHDQSQAQSWQDLVPRYAFSRDGRALLLSRNGRFERIALDREAPRAIPFIASV 371

Query: 422 D-----LNGRNETLINTPAYAS---DPQ 441
           D     L G +      P  A    DP 
Sbjct: 372 DLELGPLTGADIRQDTGPVQARLIQDPA 399



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 96/291 (32%), Gaps = 40/291 (13%)

Query: 178 LFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +    + V+     +L +MD  DGA  + L P+ D   F P ++P+ + + Y T++  + 
Sbjct: 400 VSPDGTRVAFSALGALYLMDMEDGALPKRL-PTGDVPAFHPSWAPDGKALTYVTWEGGEG 458

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-------------EAMD 283
            +V+ +        +      +    P F+ +G+  L+    +                 
Sbjct: 459 GQVWALAPGAAAPRQLSHGPGAYYTHPVFTPDGRDVLVVASDNVARMQASMVFGSVREAQ 518

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG------KEQLYVMQSNGSD 337
           +  +  Q     R+ +   +  +  +  D+ + V+     G      +  L         
Sbjct: 519 LQRLSAQGGQA-RILHRGTLGGTLHFGADADR-VYAMGSGGLLGIDLRSGLADAPIVVKG 576

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---------RLLVE 388
                QD      D   SP G  +       ++  +  + K G+           R + +
Sbjct: 577 PGWYFQDGSVPVDDLRISPDGQWLL--AQVAQQLHLLPVPKKGTTVDLLAPGMRHRRITD 634

Query: 389 DSNLQAPTWSPSGRSLIF----SRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                   WS  GR++ +    S  +       L+  D  G  +  + TP 
Sbjct: 635 VGADYF-AWSADGRTMTWSIGSSVYRRARADIALHVADAPG-WDADVPTPG 683


>gi|254294875|ref|YP_003060898.1| amidohydrolase [Hirschia baltica ATCC 49814]
 gi|254043406|gb|ACT60201.1| amidohydrolase [Hirschia baltica ATCC 49814]
          Length = 1103

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 66/166 (39%), Gaps = 13/166 (7%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               ++   S +GK     +  D    IY +  +    + + +      S  +S D   +
Sbjct: 33  EGSWMSLDISPDGKWIAFDLLND----IYIMSAEGGEAKAILSGPATQKSPQFSSDGKTL 88

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV- 375
            + SD  G + ++     G  +K+IS ++      P WSP  + I       E   +   
Sbjct: 89  AYISDASGHDNIWTASVKGKKRKQISFEERDIISSPAWSPSDEAIIAVVREPEASKVYSS 148

Query: 376 ----MKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGD 413
                  DGS+ + +V+      ++Q P +SP G  L ++++  GD
Sbjct: 149 TIREYYVDGSEPKHMVDAPGGRRDVQEPRYSPDGEYLYYTQRVGGD 194



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 95/268 (35%), Gaps = 61/268 (22%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+ + +A+   +D     +Y+M        K I +  +   +P+FSS+GK        
Sbjct: 41  ISPDGKWIAFDLLND-----IYIMSAE-GGEAKAILSGPATQKSPQFSSDGKTLAYISDA 94

Query: 279 DEAMDIYSVDLQSNATERLTN-TLFINISASYSP-DSSQIVFESDREG----KEQLYVMQ 332
               +I++  ++    ++++     I  S ++SP D + I    + E        +    
Sbjct: 95  SGHDNIWTASVKGKKRKQISFEERDIISSPAWSPSDEAIIAVVREPEASKVYSSTIREYY 154

Query: 333 SNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG---------VMKK--- 378
            +GS+ K +  +        +P +SP G+ + +T+  G    +          VM+    
Sbjct: 155 VDGSEPKHMVDAPGGRRDVQEPRYSPDGEYLYYTQRVGGDHYVYVNTGLKNFNVMRAPLK 214

Query: 379 ------------------DGSQ----ERLLVEDSNLQAPTW-----------SPSGRSLI 405
                             DG           +  +L  P             SP G+ + 
Sbjct: 215 IDMEKLKSKGHYDAGRENDGRGKKRKLHHKRKPGHLARPYISGFGSATTAEVSPDGQKIA 274

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINT 433
           F R+    T   L++ D   R +T + +
Sbjct: 275 FIRRHKAQT--VLFTFDTETRRQTPVYS 300



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 96/305 (31%), Gaps = 66/305 (21%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E+G + S  +      ++  + N + +M  +G   + +  S       P+FS + + +AY
Sbjct: 32  EEGSWMSLDISPDGKWIAFDLLNDIYIMSAEGGEAKAIL-SGPATQKSPQFSSDGKTLAY 90

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D      ++    +  +  +     R +I +P +S + +  +  V++ EA  +YS  
Sbjct: 91  IS-DASGHDNIWTASVKGKKRKQISFEERDIISSPAWSPSDEAIIAVVREPEASKVYSST 149

Query: 289 L-----QSNATERLTNTLF--INI-SASYSPDSSQIVFESDREGKEQLYV---------- 330
           +       +  + + +      ++    YSPD   + +     G   +YV          
Sbjct: 150 IREYYVDGSEPKHMVDAPGGRRDVQEPRYSPDGEYLYYTQRVGGDHYVYVNTGLKNFNVM 209

Query: 331 --------------------MQSNG-------------SDQKRISQDKEASYFDPVWSPQ 357
                                +++G                 R       S      SP 
Sbjct: 210 RAPLKIDMEKLKSKGHYDAGRENDGRGKKRKLHHKRKPGHLARPYISGFGSATTAEVSPD 269

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQER-------------LLVEDSNLQAPTWSPSGRSL 404
           G  IAF +    +  +     +  ++               L ++    +  W P  R +
Sbjct: 270 GQKIAFIRRHKAQTVLFTFDTETRRQTPVYSELSRDLQSDYLPQEHYYPSYAWFPDNRHI 329

Query: 405 IFSRK 409
               K
Sbjct: 330 AIWSK 334



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 42/102 (41%), Gaps = 9/102 (8%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSL 404
           E S+     SP G  IAF   +     I +M  +G + + +L   +  ++P +S  G++L
Sbjct: 33  EGSWMSLDISPDGKWIAFDLLND----IYIMSAEGGEAKAILSGPATQKSPQFSSDGKTL 88

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA--SDPQWVG 444
            +     G     +++  + G+    I+       S P W  
Sbjct: 89  AYISDASGH--DNIWTASVKGKKRKQISFEERDIISSPAWSP 128



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 87/236 (36%), Gaps = 28/236 (11%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L   D             D+  FEP  S ++ ++ Y ++DDE    +   D +  +    
Sbjct: 400 LWQKDLTNNTPITAFTGEDKSEFEPALSFDRDELVYVSWDDETGSELRYRDLKTGQETVL 459

Query: 253 IGNFRSMILAPRFSSNGKRALI-------SVQKDE-AMDIYSVDLQSNATERLTNTLFIN 304
           +      I  P FS +GK           S+        IY+   ++   E +      +
Sbjct: 460 VST-PGTIRDPVFSHSGKLLAYRIMPADPSMSAPGPEAGIYTYTFET---EEIDFVEEAD 515

Query: 305 ISASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +S D S++ +      R+ KE L+ +  NG +Q+  +     +  D   SP    +
Sbjct: 516 KLLQFSKDDSKLYYIGAGRGRDKKEGLFSVSLNGENQEEHAYTTSYNVRDLDISPDEKWL 575

Query: 362 AFT----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           AF           K S E + +  +  + ++    +   +L   +WS  G +L ++
Sbjct: 576 AFKDNNDLFIAPFKKSDEAWEVSEIDTENAKMIAPLGGYDL---SWSNDGLTLRWT 628



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 49/348 (14%), Positives = 99/348 (28%), Gaps = 90/348 (25%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDE 234
           I  V E   S +  +++     DG+  +++   P   + + EPR+SP+ + + Y      
Sbjct: 134 IAVVREPEASKVYSSTIREYYVDGSEPKHMVDAPGGRRDVQEPRYSPDGEYLYYTQRVGG 193

Query: 235 DILRVYLMDTRI------------------------------------------DRAPKR 252
           D         +                                               + 
Sbjct: 194 DHYVYVNTGLKNFNVMRAPLKIDMEKLKSKGHYDAGRENDGRGKKRKLHHKRKPGHLARP 253

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER----LTNTLFINISA- 307
             +          S +G++     +      +++ D ++         L+  L  +    
Sbjct: 254 YISGFGSATTAEVSPDGQKIAFIRRHKAQTVLFTFDTETRRQTPVYSELSRDLQSDYLPQ 313

Query: 308 -------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA------------- 347
                  ++ PD+  I   S    K ++  +     D   I     +             
Sbjct: 314 EHYYPSYAWFPDNRHIAIWS----KGKILRIDMENGDASTIPFKLTSKHEIQPPIRVQQD 369

Query: 348 ---------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPT 396
                    +  +PVW     ++ F   S     +       +        ED +   P 
Sbjct: 370 LAPETVDVKTIRNPVWIADDKIVVFRALS----KLWQKDLTNNTPITAFTGEDKSEFEPA 425

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWV 443
            S     L++    D +TGS+L   DL  G+   L++TP    DP + 
Sbjct: 426 LSFDRDELVYVSWDD-ETGSELRYRDLKTGQETVLVSTPGTIRDPVFS 472



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/250 (12%), Positives = 72/250 (28%), Gaps = 30/250 (12%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  P +  + + V +       + +++  D   +               P  S +    +
Sbjct: 380 IRNPVWIADDKIVVF-----RALSKLWQKDLTNNTPITAFTGEDKSEFEPALSFDRDELV 434

Query: 274 ISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFE--------SDREG 324
                DE        DL++     L +T        +S     + +         S    
Sbjct: 435 YVSWDDETGSELRYRDLKTGQETVLVSTPGTIRDPVFSHSGKLLAYRIMPADPSMSAPGP 494

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---KFSGEKFAIGVMKKDG- 380
           +  +Y       +   I   +EA      +S     + +    +   +K  +  +  +G 
Sbjct: 495 EAGIYTYTFETEE---IDFVEEADKLLQ-FSKDDSKLYYIGAGRGRDKKEGLFSVSLNGE 550

Query: 381 -SQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-----GDTGSKLYSID-LNGRNETLINT 433
             +E       N++    SP  + L F    D          + + +  ++  N  +I  
Sbjct: 551 NQEEHAYTTSYNVRDLDISPDEKWLAFKDNNDLFIAPFKKSDEAWEVSEIDTENAKMIA- 609

Query: 434 PAYASDPQWV 443
           P    D  W 
Sbjct: 610 PLGGYDLSWS 619



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 90/322 (27%), Gaps = 103/322 (31%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAP---KRIGNFRSMILAP--------RFSSN 268
           SP+ QK+A+     +    ++  DT   R       +         P         +  +
Sbjct: 267 SPDGQKIAFIR-RHKAQTVLFTFDTETRRQTPVYSELSRDLQSDYLPQEHYYPSYAWFPD 325

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE----RLTN------------TLFINI------- 305
            +   I  +      I  +D+++        +LT+             L           
Sbjct: 326 NRHIAIWSKG----KILRIDMENGDASTIPFKLTSKHEIQPPIRVQQDLAPETVDVKTIR 381

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  +  D   +VF +      +L+      +        ++ S F+P  S   D + +  
Sbjct: 382 NPVWIADDKIVVFRA----LSKLWQKDLTNNTPITAFTGEDKSEFEPALSFDRDELVYVS 437

Query: 366 FSGE-KFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIF----------------- 406
           +  E    +        QE +LV     ++ P +S SG+ L +                 
Sbjct: 438 WDDETGSELRYRDLKTGQETVLVSTPGTIRDPVFSHSGKLLAYRIMPADPSMSAPGPEAG 497

Query: 407 ---------------------------------SRKKDGDTGSKLYSIDLNGRNET--LI 431
                                               +  D    L+S+ LNG N+     
Sbjct: 498 IYTYTFETEEIDFVEEADKLLQFSKDDSKLYYIGAGRGRDKKEGLFSVSLNGENQEEHAY 557

Query: 432 NTPAYASD----P--QWVGFMD 447
            T     D    P  +W+ F D
Sbjct: 558 TTSYNVRDLDISPDEKWLAFKD 579


>gi|268317283|ref|YP_003291002.1| WD40 domain-containing protein beta Propeller [Rhodothermus marinus
           DSM 4252]
 gi|262334817|gb|ACY48614.1| WD40 domain protein beta Propeller [Rhodothermus marinus DSM 4252]
          Length = 982

 Score =  108 bits (269), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 17/134 (12%)

Query: 256 FRSMI--LAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           F  ++   +P +S +G R   S + +   +D+Y +++     ERLT  L+ +   ++SPD
Sbjct: 395 FPGLVALYSPTWSPDGARLAFSAIDEGGWIDLYVLEVSGGRLERLTRDLYDDRDPAWSPD 454

Query: 313 SSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
              +VF SDR          L++   N     +++ D      +P WSP G  + F    
Sbjct: 455 GRYLVFASDRTAWGDRYGMNLFLYDFNTGQIHQLT-DGWRRDREPRWSPDGRYVVFAS-- 511

Query: 368 GEKFAIGVMKKDGS 381
                  VM+ DG 
Sbjct: 512 ------AVMEADGR 519



 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 85/216 (39%), Gaps = 38/216 (17%)

Query: 198 RDGANIRYLTPSRDQ---ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            D      +T  R      L+ P +SP+  ++A++  D+   + +Y+++    R  +R+ 
Sbjct: 382 YDLEREELVTTYRFPGLVALYSPTWSPDGARLAFSAIDEGGWIDLYVLEVSGGRL-ERLT 440

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-----QSNATERLTNTLFINISASY 309
                   P +S +G+  + +  +    D Y ++L      +    +LT+    +    +
Sbjct: 441 RDLYDDRDPAWSPDGRYLVFASDRTAWGDRYGMNLFLYDFNTGQIHQLTDGWRRDREPRW 500

Query: 310 SPDSSQIVFES------DREGKEQLYVMQSN--------------------GSDQKRISQ 343
           SPD   +VF S       R G   ++ ++                      G   +R+ +
Sbjct: 501 SPDGRYVVFASAVMEADGRFGPRNIWAVEVAPALPTRPVATAFPETGSEPVGPPVRRLYR 560

Query: 344 DKE--ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                 + FDP+W+P G L+ F+ F   +F +  + 
Sbjct: 561 LTNLATAAFDPLWTPDGHLL-FSAFEHYRFTVRRIP 595



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 44/148 (29%), Gaps = 29/148 (19%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
               D    +     +        +L + D +   I  LT    +   EPR+SP+ + V 
Sbjct: 450 AWSPDGRYLVFASDRTAWGDRYGMNLFLYDFNTGQIHQLTDG-WRRDREPRWSPDGRYVV 508

Query: 228 YATYDDE-----DILRVYLMDTRIDRAPK----------------------RIGNFRSMI 260
           +A+   E         ++ ++       +                      R+ N  +  
Sbjct: 509 FASAVMEADGRFGPRNIWAVEVAPALPTRPVATAFPETGSEPVGPPVRRLYRLTNLATAA 568

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVD 288
             P ++ +G   L S  +     +  + 
Sbjct: 569 FDPLWTPDG-HLLFSAFEHYRFTVRRIP 595



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 77/250 (30%), Gaps = 29/250 (11%)

Query: 101 QDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK--QIIGKKFFSSPASW----RKI 154
             W+  G + LV         DR  +   L+D    +  Q+           W    R +
Sbjct: 449 PAWSPDG-RYLVFASDRTAWGDRYGMNLFLYDFNTGQIHQLTDGWRRDREPRWSPDGRYV 507

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR-------YLT 207
               +  + ++     G F  R ++  E   +   +         G+          Y  
Sbjct: 508 V--FASAVMEA----DGRFGPRNIWAVEVAPALPTRPVATAFPETGSEPVGPPVRRLYRL 561

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +     F+P ++P+   +  A       +R           P +      +   P +  
Sbjct: 562 TNLATAAFDPLWTPDGHLLFSAFEHYRFTVRRIPDVAERLVRPHQQATVALLGSRPPWKP 621

Query: 268 NGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            G+ +  S V++      YS+D+           + I+ SA +       +  SD  G +
Sbjct: 622 -GRLSADSGVRRKPYRRRYSLDVAYG-------GISISQSALWGTTGGAALAFSDLLGDD 673

Query: 327 QLYVMQSNGS 336
           + YV   +  
Sbjct: 674 RWYVTVFHTG 683


>gi|171679856|ref|XP_001904874.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939554|emb|CAP64781.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1108

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 89/242 (36%), Gaps = 21/242 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    FSP+  ++  A+ D      + + + +  +  +++      + +  
Sbjct: 749 QTFEGHSGSVRSVAFSPDGSRIVSASNDQ----TIRIWEAKSGKEVRKLEGHSGSVRSVA 804

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G R + S   D  + I+          +L        S ++SPDSS+IV  SD   
Sbjct: 805 FSPDGSRIV-SASDDGTIRIWEA-KSGKEVRKLEGHSNWVRSVAFSPDSSRIVSASD--- 859

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + + ++    + R  +    S     +SP G  I  +  + +   I   K  G + R
Sbjct: 860 DGTIRIWEAKSGKEVRKLEGHSGSVRSVAFSPDGSRIV-SASNDQTIRIWEAK-SGKEVR 917

Query: 385 LL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            L      + +  +SP G  ++ +     D   +++    +G+    +   +      WV
Sbjct: 918 KLEGHSGLVLSVAFSPDGSRIVSASN---DQTIRIWEAK-SGKEVRKLEGHSN-----WV 968

Query: 444 GF 445
            F
Sbjct: 969 WF 970



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 101/298 (33%), Gaps = 46/298 (15%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             +VS     ++ + +                +    FSP+  ++  A+ D      + + 
Sbjct: 769  RIVSASNDQTIRIWEAKSGKEVRKLEGHSGSVRSVAFSPDGSRIVSASDDG----TIRIW 824

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            + +  +  +++    + + +  FS +  R + S   D  + I+          +L     
Sbjct: 825  EAKSGKEVRKLEGHSNWVRSVAFSPDSSRIV-SASDDGTIRIWEA-KSGKEVRKLEGHSG 882

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S ++SPD S+IV  S+    + + + ++    + R  +          +SP G  I 
Sbjct: 883  SVRSVAFSPDGSRIVSASN---DQTIRIWEAKSGKEVRKLEGHSGLVLSVAFSPDGSRIV 939

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNL--------QAPTWSPSGRSLIFSRKKDG-- 412
             +  + +   I   K  G + R L   SN         ++  +SP    ++ +       
Sbjct: 940  -SASNDQTIRIWEAK-SGKEVRKLEGHSNWVWFYRNWVRSVAFSPDSSRIVSASDDGTIR 997

Query: 413  -------------DTGSKLYSIDLNGRNETLINTPAYAS------------DPQWVGF 445
                         + G+ +  I  NG +  LI    Y              DP+W G+
Sbjct: 998  IWEAASGTCLKAINVGTSVTYISFNGTSRRLITNAGYIKIATVTESPIQPDDPRWHGY 1055



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 75/205 (36%), Gaps = 15/205 (7%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           F+P    +   +A  +   +L   +++       +        + +  FS +G R + S 
Sbjct: 715 FTPANSTIRRLFAGEEPSWVLTKPVVEQNWSPCLQTFEGHSGSVRSVAFSPDGSRIV-SA 773

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D+ + I+          +L        S ++SPD S+IV  SD      + + ++   
Sbjct: 774 SNDQTIRIWEA-KSGKEVRKLEGHSGSVRSVAFSPDGSRIVSASD---DGTIRIWEAKSG 829

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLL-VEDSNLQA 394
            + R  +          +SP    I      G    I + +   G + R L     ++++
Sbjct: 830 KEVRKLEGHSNWVRSVAFSPDSSRIVSASDDGT---IRIWEAKSGKEVRKLEGHSGSVRS 886

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLY 419
             +SP G  ++ +     D   +++
Sbjct: 887 VAFSPDGSRIVSASN---DQTIRIW 908



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 55/325 (16%), Positives = 120/325 (36%), Gaps = 62/325 (19%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHT--------ISDD----I 162
            R++    D+     R+W+ K  K++  +K      S R +A +         SDD    I
Sbjct: 769  RIVSASNDQ---TIRIWEAKSGKEV--RKLEGHSGSVRSVAFSPDGSRIVSASDDGTIRI 823

Query: 163  YQSITGEK-------GDFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            +++ +G++        ++   + F   S  +VS     ++ + +                
Sbjct: 824  WEAKSGKEVRKLEGHSNWVRSVAFSPDSSRIVSASDDGTIRIWEAKSGKEVRKLEGHSGS 883

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +    FSP+  ++  A+ D      + + + +  +  +++     ++L+  FS +G R +
Sbjct: 884  VRSVAFSPDGSRIVSASNDQ----TIRIWEAKSGKEVRKLEGHSGLVLSVAFSPDGSRIV 939

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINI-------SASYSPDSSQIVFESDREGKE 326
             S   D+ + I+          +L               S ++SPDSS+IV  SD +G  
Sbjct: 940  -SASNDQTIRIWEA-KSGKEVRKLEGHSNWVWFYRNWVRSVAFSPDSSRIVSASD-DGTI 996

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +++   ++G+  K I+               G  + +  F+G    + +      +   +
Sbjct: 997  RIWEA-ASGTCLKAINV--------------GTSVTYISFNGTSRRL-ITNAGYIKIATV 1040

Query: 387  VEDS-NLQAPTWSP-----SGRSLI 405
             E       P W        G  +I
Sbjct: 1041 TESPIQPDDPRWHGYGLGQDGSWII 1065


>gi|166713322|ref|ZP_02244529.1| hypothetical protein Xoryp_18265 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 785

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 47/233 (20%), Positives = 91/233 (39%), Gaps = 13/233 (5%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               +  +       P  SP+   VAYA+   +      L+ +  +  P+ +      + 
Sbjct: 220 RPYQVITAGGGFDLTPSLSPDGAMVAYASLTSDRTGTSILVKSTDNAYPRVLETPAPGVS 279

Query: 262 A--PRFSSNGKRALISVQK-DEAMDIYSVDLQSNAT---ERLTNTLFINI-SASYSPDSS 314
              P +S +G+    S Q  D +  +      +        +      ++ S S+SPD+ 
Sbjct: 280 DRLPAWSPDGREIAFSRQAPDGSCRVMIAAAAATTPAAAREVARCDGADMLSFSWSPDAR 339

Query: 315 QIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEK 370
            ++F S     G  ++  +       + ++    A  FD  P +SP G  I F +     
Sbjct: 340 ALLFGSMTGSYGAARIRRLNLETGQWQTLNYPAHAGDFDYAPRYSPDGHWIVFLRNPQLG 399

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               +  + G+ ERL  +  ++   +W P G  +IF R+   D  ++LY +DL
Sbjct: 400 DLWRIPAEGGAAERLTHDTGDIWGWSWLPDGSGVIFGRRV--DIEARLYRLDL 450



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 54/318 (16%), Positives = 103/318 (32%), Gaps = 60/318 (18%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           S+ S     S+ V   D A  R L TP+       P +SP+ +++A++    +   RV +
Sbjct: 248 SLTSDRTGTSILVKSTDNAYPRVLETPAPGVSDRLPAWSPDGREIAFSRQAPDGSCRVMI 307

Query: 242 MDTRIDRAP--KRIGNFRSMIL-APRFSSNGKRALISVQKD--EAMDIYSVDLQSNATER 296
                      + +       + +  +S + +  L         A  I  ++L++   + 
Sbjct: 308 AAAAATTPAAAREVARCDGADMLSFSWSPDARALLFGSMTGSYGAARIRRLNLETGQWQT 367

Query: 297 L---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           L    +    + +  YSPD   IVF  + +    L+ + + G   +R++ D    +    
Sbjct: 368 LNYPAHAGDFDYAPRYSPDGHWIVFLRNPQ-LGDLWRIPAEGGAAERLTHDTGDIWGW-S 425

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKK----------------------------------- 378
           W P G  + F +    +  +  +                                     
Sbjct: 426 WLPDGSGVIFGRRVDIEARLYRLDLLDRSLHDLGVDDAQAPDVAHGHLVFAQRKPQFGVY 485

Query: 379 -------DGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR--- 426
                  +G   + RL         P  +P GR L+F+  + G  G     +   G    
Sbjct: 486 QVIRDTMNGGYIRRRLFSSSGRDDQPMIAPDGRQLVFASNRSGTYGLWWGDVSKPGSVRL 545

Query: 427 NETLINTPAYASDPQWVG 444
            E L      A+D  W  
Sbjct: 546 IEGLRPDSRQAAD--WSA 561



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 85/292 (29%), Gaps = 52/292 (17%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-ED 235
           +LF S +   G  +     ++                 + PR+SP+   + +       D
Sbjct: 341 LLFGSMTGSYGAARIRRLNLETGQWQTLNYPAHAGDFDYAPRYSPDGHWIVFLRNPQLGD 400

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT- 294
           + R+         A +R+ +    I    +  +G   +   + D    +Y +DL   +  
Sbjct: 401 LWRI----PAEGGAAERLTHDTGDIWGWSWLPDGSGVIFGRRVDIEARLYRLDLLDRSLH 456

Query: 295 ------------------------------------------ERLTNTLFINISASYSPD 312
                                                      RL ++   +     +PD
Sbjct: 457 DLGVDDAQAPDVAHGHLVFAQRKPQFGVYQVIRDTMNGGYIRRRLFSSSGRDDQPMIAPD 516

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKF 371
             Q+VF S+R G   L+    +     R+ +  +  S     WS     +  +       
Sbjct: 517 GRQLVFASNRSGTYGLWWGDVSKPGSVRLIEGLRPDSRQAADWSADSQRLLVSGSDAAGH 576

Query: 372 A--IGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
           A    V    G   RL V           P   + L+ +   DG T + LY 
Sbjct: 577 AALFEVTPSSGKVVRLPVPQPRPLQAIHLPDPDQVLVLAAADDGHTFATLYD 628



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 3/63 (4%)

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASD--PQ 441
           +         P+ SP G  + ++      TG+ +     +     ++ TPA   SD  P 
Sbjct: 225 ITAGGGFDLTPSLSPDGAMVAYASLTSDRTGTSILVKSTDNAYPRVLETPAPGVSDRLPA 284

Query: 442 WVG 444
           W  
Sbjct: 285 WSP 287


>gi|218782212|ref|YP_002433530.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Desulfatibacillum alkenivorans AK-01]
 gi|218763596|gb|ACL06062.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Desulfatibacillum alkenivorans AK-01]
          Length = 610

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 114/324 (35%), Gaps = 39/324 (12%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  Y          +   +       +    + +CV++ DG     LT +          
Sbjct: 57  DSAYPGWGNWNWSSDGAKIVYQVDDSNLSNSSEICVINADGTGFTRLTDNDRCDSHASFV 116

Query: 220 SPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKR 271
            PN  KV +    A+  + +I  V +  +      +          A    P  S +G +
Sbjct: 117 WPNNAKVVFQRNVASSGNGEIWIVNVDGSNPTSLTQAHNGPMGGASAGENNPMVSPDGTK 176

Query: 272 ALI---SVQKDEAMDIYSVDLQSNATERLT--NTLFINISAS-YSPDSSQIVF--ESDRE 323
                     D    ++ +D+     + +   N   I+IS   +SPDS  + F    +  
Sbjct: 177 VAFRGCVPASDGYAHLFVMDIDGANVKDVAAYNDRIIDISHHCWSPDSKWVCFKACDESV 236

Query: 324 GKEQLYVMQSNGSDQKR-ISQDKEA---------SYFDPVWSPQGDLIAFTKFSGEKFA- 372
           G  +++ ++++G+     +S   +A             P WSP G  I+ + ++GE +  
Sbjct: 237 GDARIFKVKADGTAAPVKLSPADDAMPAAWNDWFCQNWPRWSPDGKWISTSLYTGENYND 296

Query: 373 --IGVMKKDGSQERLLVE----------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             I +M  DG   + ++           D   Q+ TWSP  + L++S     +  + L  
Sbjct: 297 KKIVIMDSDGQNMKTIMAQDGDDDGDNYDWIHQSGTWSPDSKWLVYSMNTVAEGDTALCI 356

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
            +++      +        P+W  
Sbjct: 357 SNVDNGAFYQLTKDYEDCQPRWSP 380



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 83/209 (39%), Gaps = 33/209 (15%)

Query: 193 LCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRA 249
           L VMD DGAN++ +    D+I+      +SP+ + V +   D+     R++ +      A
Sbjct: 192 LFVMDIDGANVKDVAAYNDRIIDISHHCWSPDSKWVCFKACDESVGDARIFKVKADGTAA 251

Query: 250 PKRIGNFRSMILA----------PRFSSNGKRA---LISVQKDEAMDIYSVDLQSNATER 296
           P ++      + A          PR+S +GK     L + +      I  +D      + 
Sbjct: 252 PVKLSPADDAMPAAWNDWFCQNWPRWSPDGKWISTSLYTGENYNDKKIVIMDSDGQNMKT 311

Query: 297 LT---------NTLFINISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRISQDK 345
           +          N  +I+ S ++SPDS  +V+  +   EG   L +   +     ++++D 
Sbjct: 312 IMAQDGDDDGDNYDWIHQSGTWSPDSKWLVYSMNTVAEGDTALCISNVDNGAFYQLTKDY 371

Query: 346 EASYFDPVWSPQGD----LIAFTKFSGEK 370
           E     P WSP        I F   SG  
Sbjct: 372 E--DCQPRWSPSPKNKPGSILFKGHSGGD 398


>gi|113971218|ref|YP_735011.1| transcriptional regulator domain-containing protein [Shewanella sp.
           MR-4]
 gi|113885902|gb|ABI39954.1| transcriptional regulator domain protein [Shewanella sp. MR-4]
          Length = 716

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 53/277 (19%), Positives = 101/277 (36%), Gaps = 55/277 (19%)

Query: 219 FSPNQQKVAYAT-YDDEDILRVYLMDT-RIDRAPKRIG-----NFRSMILAPRFSSNGKR 271
            S + Q +AY + ++   +  +Y +   + D   +R+      N+    LA  FS +G+ 
Sbjct: 286 ISADGQYLAYVSSHEAGKVGGIYRLSLVQPDAKAERLSCEAHCNYEDRDLA--FSPDGRW 343

Query: 272 ALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             I+ +    + DI+  DL S    RLT+ L      S++PDS  +VF ++  G    + 
Sbjct: 344 LAIARRFSNISEDIFIRDLASANETRLTHGLEDIRGLSWTPDSQSLVFATEDSGSRNGFT 403

Query: 331 MQSNGSDQKRISQDK-------------------------------------------EA 347
           +    +  + +  +                                              
Sbjct: 404 IDIETAHIRPLDVEGMSYPSSVSDEGELVYHQYRRQFQMAYFSLGESVPGSLFPLLYSGI 463

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
           S+ +P +SP+   I F         I     +G +        S +  P WSP G  + F
Sbjct: 464 SHRNPDYSPEAKRIVFVSSDTGYNEIWTSDINGKKLEQHTHLKSRVAYPRWSPDGAKIAF 523

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQW 442
               D + G++++ +DL  +N T + +  +    P W
Sbjct: 524 IAPDDSNEGNRIFILDLASKNITALASSYHNHGRPSW 560



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 50/311 (16%), Positives = 104/311 (33%), Gaps = 32/311 (10%)

Query: 145 FSSPASWRKIAHTISD---DIY-------------QSITGEKGDFNSRILFVSESVVSGI 188
           FS    W  IA   S+   DI+               +   +G   +             
Sbjct: 337 FSPDGRWLAIARRFSNISEDIFIRDLASANETRLTHGLEDIRGLSWTPDSQSLVFATEDS 396

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              +   +D + A+IR L       +  P    ++ ++ Y  Y  +  +  + +   +  
Sbjct: 397 GSRNGFTIDIETAHIRPLDVEG---MSYPSSVSDEGELVYHQYRRQFQMAYFSLGESVPG 453

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           +   +         P +S   KR +         +I++ D+     E+ T+         
Sbjct: 454 SLFPLLYSGISHRNPDYSPEAKRIVFVSSDTGYNEIWTSDINGKKLEQHTHLKSRVAYPR 513

Query: 309 YSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +SPD ++I F +  D     +++++     +   ++     ++  P W+ QG  +  +  
Sbjct: 514 WSPDGAKIAFIAPDDSNEGNRIFILDLASKNITALAS-SYHNHGRPSWNWQGTAVLASTT 572

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            G    I     D S  R++       A  ++ S    +FSR       + L+ IDL   
Sbjct: 573 DG----ITEFYLDNSTPRVI--SPLTMAVGFAKSANEFVFSRY----GVNGLWQIDLTQP 622

Query: 427 NETLINTPAYA 437
            +     P   
Sbjct: 623 EQVQEIIPGKV 633


>gi|332306167|ref|YP_004434018.1| WD40-like beta Propeller containing protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332173496|gb|AEE22750.1| WD40-like beta Propeller containing protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 692

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 90/276 (32%), Gaps = 22/276 (7%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           + FV   +     K    +   D   +     +     + P  SP++ K+AY +      
Sbjct: 56  VYFVRNFMDIQNDKKRGNIWKVDKNKVMTPVTNGLHADYSPTLSPDESKLAYISTASGSA 115

Query: 237 -LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT- 294
            + +  +D+       R+    S +    +S +GK    S           V L      
Sbjct: 116 QIHIKWLDSGQTGQMTRLTGAPSNL---SWSPDGKMLAFSQFVKGTPKSP-VSLSGKPEG 171

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +  ++        Y  D +  +      G  Q++V+ + G   ++++Q +     +  W
Sbjct: 172 AKWADSAIFIDDLFYRADGAGYL----PAGNSQIFVLSAEGGTPRQLTQGEFDHGGNISW 227

Query: 355 SPQGDLIAFTKFSGEKF-------AIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIF 406
           S     I F+    +          +  +         L +       P+ SP G+ + +
Sbjct: 228 SSDSKSIVFSANRHKDSDLELTDDNLYKIDVATGNMLALTDRLGPDNGPSISPDGKLIAY 287

Query: 407 SRK---KDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                       ++LY +D+NG     + TP +   
Sbjct: 288 LGYDEKYSNYENTQLYVMDVNGGVSRSL-TPQFDRS 322



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 76/257 (29%), Gaps = 56/257 (21%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S++ ++S +  S  I        + G   R      +       +SP+ + +A++ +   
Sbjct: 103 SKLAYISTASGSAQIHIKWLDSGQTGQMTRLTGAPSNL-----SWSPDGKMLAFSQFVKG 157

Query: 235 DI---------------------------------------LRVYLMDTRIDRAPKRIGN 255
                                                     +++++        +    
Sbjct: 158 TPKSPVSLSGKPEGAKWADSAIFIDDLFYRADGAGYLPAGNSQIFVLSAEGGTPRQLTQG 217

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDI-------YSVDLQSNATERLTNTLFINISAS 308
                    +SS+ K  + S  + +  D+       Y +D+ +     LT+ L  +   S
Sbjct: 218 EFDHGGNISWSSDSKSIVFSANRHKDSDLELTDDNLYKIDVATGNMLALTDRLGPDNGPS 277

Query: 309 YSPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            SPD   I +    E        QLYVM  NG   + ++   + S     W+     +  
Sbjct: 278 ISPDGKLIAYLGYDEKYSNYENTQLYVMDVNGGVSRSLTPQFDRSVGSIKWASDSKGLYM 337

Query: 364 TKFSGEKFAIGVMKKDG 380
           +     +  +      G
Sbjct: 338 SYDDKGETYVAYQPISG 354



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 49/132 (37%), Gaps = 9/132 (6%)

Query: 168 GEKGDFNSRILFVSESVVSGI----IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                 +S+ +  S +           ++L  +D    N+  LT  R      P  SP+ 
Sbjct: 224 NISWSSDSKSIVFSANRHKDSDLELTDDNLYKIDVATGNMLALTD-RLGPDNGPSISPDG 282

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY  YD++    +  ++Y+MD     +      F   + + +++S+ K   +S    
Sbjct: 283 KLIAYLGYDEKYSNYENTQLYVMDVNGGVSRSLTPQFDRSVGSIKWASDSKGLYMSYDDK 342

Query: 280 EAMDIYSVDLQS 291
               +    +  
Sbjct: 343 GETYVAYQPISG 354


>gi|116622819|ref|YP_824975.1| peptidase S41 [Candidatus Solibacter usitatus Ellin6076]
 gi|116225981|gb|ABJ84690.1| peptidase S41 [Candidatus Solibacter usitatus Ellin6076]
          Length = 1137

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 63/301 (20%), Positives = 117/301 (38%), Gaps = 26/301 (8%)

Query: 159 SDDIYQSITGEKGDFNS-RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           S+DIY    G+K  F S R   ++        +    ++   G +I   +     I++E 
Sbjct: 215 SNDIYPMWIGDKIYFLSDRSGPMTLFRYDPQSRKVDELIHNTGKDIMSASAGPGGIVYE- 273

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +F    Q   +     ++      +   +        N    +     S  G RA+    
Sbjct: 274 QF---GQVHIFDIASGKEHAVNIDIAADLTEVRPHFQNVARELRNSAISPTGVRAVF--- 327

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNG- 335
            +   +I +V         LTNT  + + S ++SPD   I + SD  G+  L++   NG 
Sbjct: 328 -EGHGEILTVPADKGEVRNLTNTPGVMDRSPAWSPDGKTIAYFSDESGEYALHIKAQNGA 386

Query: 336 SDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
            + K+I+   K A YFDP WSP    IAF   +  +  +  ++    +   +  +     
Sbjct: 387 GETKKIALAGKSAFYFDPKWSPDSKAIAF---NDNQDNLWTVEVASGKLTKVDTNYLYDL 443

Query: 394 --APTWSPSGRSLIFSRKKDGD-TGSKLYSIDLNGRNETLINT------PAYASDPQWVG 444
                WS   + + F R          +YS++ +G++  + +       PA+  D Q++ 
Sbjct: 444 NRGFNWSGDSKWIAFERFLPNRLRAILIYSVE-SGKSVQITDGMSDARNPAFDRDGQYLY 502

Query: 445 F 445
           F
Sbjct: 503 F 503



 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 74/206 (35%), Gaps = 30/206 (14%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           R      R+ +        +FS +GK    + + D  +D+++V +     +R+T     +
Sbjct: 50  RDGGVASRLTSGPGFETEAKFSPDGKTLAFTGEYDGNVDVFTVPVAGGVPKRVTYHPDGD 109

Query: 305 ISASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +S D S+IVF S+R       QLY + + G     +            +SP G  +
Sbjct: 110 RVVGWSADGSRIVFRSNRLSQSRYTQLYTVAAEGGLPDVL---PLPLACMGAYSPDGKRM 166

Query: 362 AFTKFSGEKFA-------------------IGVMK-KDGSQERLLVEDSNLQAPTWSPSG 401
            +    G +FA                   + V+   D S  ++   DSN   P W   G
Sbjct: 167 VYAPLDGGQFAPGFTNFVAWKRYRGGEASYLWVVNFADLSTVKIPRTDSNDIYPMWI--G 224

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRN 427
             + F   + G     L+  D   R 
Sbjct: 225 DKIYFLSDRSGPMT--LFRYDPQSRK 248



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 113/296 (38%), Gaps = 49/296 (16%)

Query: 179 FVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           FV+     G   + L V++  D + ++      + I   P +     K+ + + D    +
Sbjct: 183 FVAWKRYRGGEASYLWVVNFADLSTVKIPRTDSNDI--YPMW--IGDKIYFLS-DRSGPM 237

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            ++  D +  +  + I N    I++      G   +     ++   ++  D+ S     +
Sbjct: 238 TLFRYDPQSRKVDELIHNTGKDIMSASAGPGG--IVY----EQFGQVHIFDIASGKEHAV 291

Query: 298 TNTLFIN---ISASY------------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
              +  +   +   +            SP   + VF    EG  ++  + ++  + + ++
Sbjct: 292 NIDIAADLTEVRPHFQNVARELRNSAISPTGVRAVF----EGHGEILTVPADKGEVRNLT 347

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER----LLVEDSNLQAPTWS 398
                    P WSP G  IA+      ++A+ +  ++G+ E     L  + +    P WS
Sbjct: 348 NTPGVMDRSPAWSPDGKTIAYFSDESGEYALHIKAQNGAGETKKIALAGKSAFYFDPKWS 407

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP---------AYASDPQWVGF 445
           P  +++ F+  +D      L+++++     T ++T           ++ D +W+ F
Sbjct: 408 PDSKAIAFNDNQD-----NLWTVEVASGKLTKVDTNYLYDLNRGFNWSGDSKWIAF 458



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 91/285 (31%), Gaps = 18/285 (6%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGA 201
           ++        ++ H    DI  +  G  G    +   V    + SG        +  D  
Sbjct: 241 RYDPQSRKVDELIHNTGKDIMSASAGPGGIVYEQFGQVHIFDIASGKEHAVNIDIAADLT 300

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MI 260
            +R    +  + L     SP   +  +  + +       L         + + N    M 
Sbjct: 301 EVRPHFQNVARELRNSAISPTGVRAVFEGHGE------ILTVPADKGEVRNLTNTPGVMD 354

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIV 317
            +P +S +GK       +     ++          +   L           +SPDS  I 
Sbjct: 355 RSPAWSPDGKTIAYFSDESGEYALHIKAQNGAGETKKIALAGKSAFYFDPKWSPDSKAIA 414

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFA-IGV 375
           F    + ++ L+ ++       ++  +          WS     IAF +F   +   I +
Sbjct: 415 FN---DNQDNLWTVEVASGKLTKVDTNYLYDLNRGFNWSGDSKWIAFERFLPNRLRAILI 471

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD-GDTGSKL 418
              +  +   + +  S+ + P +   G+ L F+   + G T S L
Sbjct: 472 YSVESGKSVQITDGMSDARNPAFDRDGQYLYFTASTNYGPTSSGL 516



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 99/349 (28%), Gaps = 87/349 (24%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL- 237
           F +E+  S   K      + DG    +  P    +     + P+  +V   + D   I+ 
Sbjct: 64  FETEAKFSPDGKTLAFTGEYDGNVDVFTVPVAGGVPKRVTYHPDGDRVVGWSADGSRIVF 123

Query: 238 -RVYLMDTRIDRAPKRIGNFRSMILAP-------RFSSNGKRALIS-------------- 275
               L  +R  +            + P        +S +GKR + +              
Sbjct: 124 RSNRLSQSRYTQLYTVAAEGGLPDVLPLPLACMGAYSPDGKRMVYAPLDGGQFAPGFTNF 183

Query: 276 -----VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                 +  EA  ++ V+    +T ++  T   +I   +     +I F SDR G   L+ 
Sbjct: 184 VAWKRYRGGEASYLWVVNFADLSTVKIPRTDSNDIYPMWI--GDKIYFLSDRSGPMTLFR 241

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----------------------- 367
                     +  +           P G  I + +F                        
Sbjct: 242 YDPQSRKVDELIHNTGKDIMSASAGPGG--IVYEQFGQVHIFDIASGKEHAVNIDIAADL 299

Query: 368 ----------------------------GEKFAIGVMKKDGSQERLLVEDSN--LQAPTW 397
                                            I  +  D  + R L        ++P W
Sbjct: 300 TEVRPHFQNVARELRNSAISPTGVRAVFEGHGEILTVPADKGEVRNLTNTPGVMDRSPAW 359

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET--LINTPAYASDPQWVG 444
           SP G+++ +   + G+    + + +  G  +   L    A+  DP+W  
Sbjct: 360 SPDGKTIAYFSDESGEYALHIKAQNGAGETKKIALAGKSAFYFDPKWSP 408



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/334 (12%), Positives = 101/334 (30%), Gaps = 85/334 (25%)

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLV--TGR---VIKEGKDRLRVE----FRLWDVKDRK 137
           F    + P ++ R+    S     L+  TG+       G   +  E      ++D+   K
Sbjct: 229 FLSDRSGPMTLFRYDP-QSRKVDELIHNTGKDIMSASAGPGGIVYEQFGQVHIFDIASGK 287

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS-----RILFVSESVVSGII--K 190
           +                 H ++ DI   +T  +  F +     R   +S + V  +    
Sbjct: 288 E-----------------HAVNIDIAADLTEVRPHFQNVARELRNSAISPTGVRAVFEGH 330

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVYLMDTRIDRA 249
             +  +  D   +R LT +   +   P +SP+ + +AY + +  +  L +   +   +  
Sbjct: 331 GEILTVPADKGEVRNLTNTPGVMDRSPAWSPDGKTIAYFSDESGEYALHIKAQNGAGETK 390

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-------------- 295
              +    +    P++S + K        D   ++++V++ S                  
Sbjct: 391 KIALAGKSAFYFDPKWSPDSKAIAF---NDNQDNLWTVEVASGKLTKVDTNYLYDLNRGF 447

Query: 296 ---------------------------------RLTNTLFINISASYSPDSSQIVFESDR 322
                                            ++T+ +    + ++  D   + F +  
Sbjct: 448 NWSGDSKWIAFERFLPNRLRAILIYSVESGKSVQITDGMSDARNPAFDRDGQYLYFTAST 507

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                   +     + +  S    A   + + SP
Sbjct: 508 NYGPTSSGLDMTSDEHEVTSNVYLAVLPNNISSP 541


>gi|238495090|ref|XP_002378781.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
 gi|220695431|gb|EED51774.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
          Length = 422

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 61/356 (17%), Positives = 119/356 (33%), Gaps = 80/356 (22%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           +      + R I H+ S   +Q  +G +G     ++ ++           L + D DG N
Sbjct: 27  QQMGLDLNVRDIPHSPSPSAHQ--SGRRGLGKDGVMLMNRIAPGTSK---LYISDIDGGN 81

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R L  S     +   FSP+ Q V + +  + D               + +    ++  +
Sbjct: 82  ERPLL-SDPVFEYHASFSPDGQWVLFTSERNGDGNSDIWRVRTKGSDLQPLVTTPAVEDS 140

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESD 321
              S++G  A  +  +    +I+ +DL +     LT+T  I   +   SPDS  I F SD
Sbjct: 141 VVLSTSGTHAAYASTEGMIANIWVLDLVTGNRWNLTDTPAIAATTNKTSPDSQWIAFSSD 200

Query: 322 REGKEQ--------------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           R  K                      ++ ++ +G+  +++   +  +   P WS  G  I
Sbjct: 201 RNTKWAGHGWETFMGLSGWEHTQELSIFAIRPDGTGFRKVIGKEGYALGSPSWSADGKRI 260

Query: 362 AF-------TKFSGEKFAI-----------------GVMKKDGSQERL------------ 385
            +       T  +   F +                  V++ + S  ++            
Sbjct: 261 VYYEMTRETTWDAHSSFDVNSANSSIVSVDFATGTDRVVEVNTSGVKIYPQYLGSTSSIG 320

Query: 386 ---------------LVEDSNLQAPTWSPSGRSLIF--SRKKDGDTGSKLYSIDLN 424
                             ++  ++P WSP G+ +++             LYS D N
Sbjct: 321 YLLKGTTKEGIYSGTTYYNTTARSPAWSPDGKRVVYEKVSWDIRPQNKLLYSWDAN 376


>gi|197105058|ref|YP_002130435.1| hypothetical protein PHZ_c1595 [Phenylobacterium zucineum HLK1]
 gi|196478478|gb|ACG78006.1| hypothetical protein PHZ_c1595 [Phenylobacterium zucineum HLK1]
          Length = 855

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 77/227 (33%), Gaps = 10/227 (4%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                S       P  SP+ ++VAYA        R   +          + +      AP
Sbjct: 329 FRPLTSEPGFKTFPALSPDGRQVAYAHAALPFAPRDIHLRAVAGGEAAAVTSGPDDDFAP 388

Query: 264 RFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            ++ +G R        D    +    +      RL          ++  D+  +V     
Sbjct: 389 AWAPDGDRIAFLRRSPDGGCAVMVAIVPRGGERRLAPCREAGAHPTWL-DARTLVVADTP 447

Query: 323 EGK--EQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTK-FSGEKFAIGVMK 377
            G    +L  + +   + + ++     +  D  P  SP G  +AF +        I V+ 
Sbjct: 448 AGGGLPRLSAIDATTGEVRALTAPPPDTLGDNEPQASPDGRQVAFRRTLRFGADEIVVLD 507

Query: 378 KDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               +ER L  D        WSP GR+L+F+  + G  G  L+ +D 
Sbjct: 508 VRTGRERTLTRDGWKAAGYVWSPDGRNLLFASNRGGGLG--LWRLDA 552



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 53/297 (17%), Positives = 103/297 (34%), Gaps = 53/297 (17%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYAT 230
           +      V     +G     L  +D     +R LT      L   EP+ SP+ ++VA+  
Sbjct: 435 WLDARTLVVADTPAGGGLPRLSAIDATTGEVRALTAPPPDTLGDNEPQASPDGRQVAFRR 494

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                   + ++D R  R  + +           +S +G+  L +  +   + ++ +D +
Sbjct: 495 TLRFGADEIVVLDVRTGRE-RTLTRDGWKAAGYVWSPDGRNLLFASNRGGGLGLWRLDAR 553

Query: 291 --------------------------------------------SNATERLTNTLFINIS 306
                                                       S A E    T   +  
Sbjct: 554 RPAEPEQVSLGLGVVSFLHMSADRTGQAVVEIARPRSGLVRLGPSGAPEARIVTASNDWD 613

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
               PD + +   SDR G   L++  + G    R+++   +    P WS  G  +AF   
Sbjct: 614 PVTGPDGA-VAHISDRAGAPDLWI-SAPGGGATRLTEGLGSYVSSPAWSGDGRSLAFIAV 671

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            G +  I  + +DGS+   L +D    ++P + P GR + +  ++      +L ++D
Sbjct: 672 IGRQADIFTVGRDGSRLLRLTDDGRDKRSPVFGPRGR-VYYVERRG--QAWRLMTVD 725



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 86/278 (30%), Gaps = 53/278 (19%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRA 272
            P +  + + +  A       L             + +       L    P+ S +G++ 
Sbjct: 432 HPTW-LDARTLVVADTPAGGGLPRLSAIDATTGEVRALTAPPPDTLGDNEPQASPDGRQV 490

Query: 273 LISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                 +  A +I  +D+++     LT   +      +SPD   ++F S+R G   L+ +
Sbjct: 491 AFRRTLRFGADEIVVLDVRTGRERTLTRDGWKAAGYVWSPDGRNLLFASNRGGGLGLWRL 550

Query: 332 QS-------------------------NGSDQKRISQDKEA------------------S 348
            +                          G     I++ +                    +
Sbjct: 551 DARRPAEPEQVSLGLGVVSFLHMSADRTGQAVVEIARPRSGLVRLGPSGAPEARIVTASN 610

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFS 407
            +DPV  P G  +A          + +    G   RL     S + +P WS  GRSL F 
Sbjct: 611 DWDPVTGPDG-AVAHISDRAGAPDLWISAPGGGATRLTEGLGSYVSSPAWSGDGRSLAFI 669

Query: 408 RKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQWVG 444
                   + ++++  +G R   L +       P +  
Sbjct: 670 AVIG--RQADIFTVGRDGSRLLRLTDDGRDKRSPVFGP 705



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 99/313 (31%), Gaps = 22/313 (7%)

Query: 107 GAQVLV-----TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
           GA  +V     TGR     +D  +    +W    R  +           WR  A   ++ 
Sbjct: 499 GADEIVVLDVRTGRERTLTRDGWKAAGYVWSPDGRNLLFASNRGGGLGLWRLDARRPAEP 558

Query: 162 IYQSITGEKGDFNSRILFVSESVVS----GIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
             + ++   G  +   +    +  +       ++ L  +   GA    +  + +   ++P
Sbjct: 559 --EQVSLGLGVVSFLHMSADRTGQAVVEIARPRSGLVRLGPSGAPEARIVTASN--DWDP 614

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              P+    A A   D        +      A +      S + +P +S +G+       
Sbjct: 615 VTGPDG---AVAHISDRAGAPDLWISAPGGGATRLTEGLGSYVSSPAWSGDGRSLAFIAV 671

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                DI++V    +   RLT+      S  + P   ++ +   R    +L  +      
Sbjct: 672 IGRQADIFTVGRDGSRLLRLTDDGRDKRSPVFGPRG-RVYYVERRGQAWRLMTVDPAAPG 730

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                      +     +P G L  + +  G +    + + DG   R   E    ++   
Sbjct: 731 AAPAPVPGGQGWRSVQAAPSGAL--YGQRQGAE---TIGRLDGGAWRPAAEVWPYESWAA 785

Query: 398 SPSGRSLIFSRKK 410
           S  G  ++ +  +
Sbjct: 786 SDDGVFILDTSAR 798



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 35/108 (32%), Gaps = 5/108 (4%)

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           R    +      P  SP G  +A+      F+     +  +        +     +  AP
Sbjct: 330 RPLTSEPGFKTFPALSPDGRQVAYAHAALPFAPRDIHLRAVAGG-EAAAVTSGPDDDFAP 388

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            W+P G  + F R+      + + +I   G    L       + P W+
Sbjct: 389 AWAPDGDRIAFLRRSPDGGCAVMVAIVPRGGERRLAPCREAGAHPTWL 436


>gi|262190170|ref|ZP_06048451.1| protease-related protein [Vibrio cholerae CT 5369-93]
 gi|262033945|gb|EEY52404.1| protease-related protein [Vibrio cholerae CT 5369-93]
          Length = 1039

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 78/239 (32%), Gaps = 37/239 (15%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ QK+A+             +          +         P +S + +    +  + 
Sbjct: 2   SPDGQKIAFTYAGQ------IWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRY 55

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------------- 326
              D++ + +Q   + RLT     +I  ++S D  Q+ F S R G +             
Sbjct: 56  GLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFMA 115

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF------------SGEKFAIG 374
           QLY + + G  ++R+      +  D   SP    I +T              S     I 
Sbjct: 116 QLYSVPAAGGREQRVL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGAVSDATRDIW 172

Query: 375 VMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                 G   ++       + P WS  G S+ +  ++ G     ++    +G     I 
Sbjct: 173 QWSPRTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSF--NIWQQRFDGSEPVQIT 229



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 71/203 (34%), Gaps = 30/203 (14%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G++   +     A  I+ V  Q      LT +   + +  +SPDS  I F +DR G 
Sbjct: 2   SPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRYGL 57

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-------------A 372
             ++++   G + +R++    A      +S  G  + F+                     
Sbjct: 58  GDVFILSIQGGESRRLTYHG-AKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFMAQ 116

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSID 422
           +  +   G +E+ ++    +     SPS   ++++ +             D    ++   
Sbjct: 117 LYSVPAAGGREQRVL-PIAISDLAISPSHSDILYTNQPSDEQPWRKGAVSDATRDIWQWS 175

Query: 423 -LNGRNETLINTPAYASDPQWVG 444
              G++  +        +P W  
Sbjct: 176 PRTGKHTQITTFRGEDRNPVWSA 198



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 99/331 (29%), Gaps = 89/331 (26%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRID 247
           G + R        I +   FS + Q++ +++    D            + ++Y +     
Sbjct: 68  GESRRLTYHGAKDIPY--AFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAGG 125

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIYSVDLQSNATE 295
           R  + +      I     S +    L + Q             D   DI+    ++    
Sbjct: 126 REQRVL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGAVSDATRDIWQWSPRTGKHT 182

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------------ 343
           ++T     + +  +S D S + + S++ G   ++  + +GS+  +I+             
Sbjct: 183 QITTFRGEDRNPVWSADGSSMYYLSEQAGSFNIWQQRFDGSEPVQITDHQKLPVRFLSAS 242

Query: 344 ---DKEASYFDPVW--------------------SPQGDLIAFTKFSGEKF--------- 371
              D    +   +W                     P G           +          
Sbjct: 243 LQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEATEMVVAPNAAEV 302

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT---------G 415
                  + V+       + + +    +   ++S  G  LI++ +++G           G
Sbjct: 303 AIVARGDVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSYVNDG 362

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            K +S  L+   E ++ T      P +   +
Sbjct: 363 GKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 393



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 296 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDVSFSSDGYRLIYASERE 349

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   +                  LT    + I   YSP+  +IV+   RE +  L
Sbjct: 350 GSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDV-IQPLYSPNLKRIVY---RENRNTL 405

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + I     +     I ++K DGS+ 
Sbjct: 406 KVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEA 465

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNG 425
            + L +    + AP +S  G+ + +     G  D    +   D+ G
Sbjct: 466 PINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDMVVQYDVYG 511



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 99/286 (34%), Gaps = 41/286 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------KVAYATYDDEDILRVYLMDTR 245
           +     DG+    +T  +   +     S           ++       +   +V +   R
Sbjct: 215 IWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRR 274

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +   NF         + N     I  + D    +Y V L S  T+R+T+T    
Sbjct: 275 SAMPDGRHNVNFNLEATEMVVAPNAAEVAIVARGD----VYVVSLLSGLTQRITDTPEAE 330

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPV 353
              S+S D  ++++ S+REG   LY    N             ++  ++ +++     P+
Sbjct: 331 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQD--VIQPL 388

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIF 406
           +SP    I + +       + V   +  +   L++   L +         WSP    ++ 
Sbjct: 389 YSPNLKRIVYRENRNT---LKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVT 445

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGFM 446
             +   +   +L   D +     L  +      P +++D QWV ++
Sbjct: 446 RDRAMSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWL 491



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 19/174 (10%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+  +   ++ + Y+ D        +D   + +      ++ P +S N 
Sbjct: 334 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 393

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR +    ++    +   D++ + T  L +   +      ++S  +SPDS  IV   DR 
Sbjct: 394 KRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV-TRDRA 449

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                + +++ +GS+          S F P +S  G  + +   +     I  M
Sbjct: 450 MSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDM 503


>gi|115374818|ref|ZP_01462092.1| prolyl oligopeptidase family protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|310817617|ref|YP_003949975.1| prolyl oligopeptidase family protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115368127|gb|EAU67088.1| prolyl oligopeptidase family protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309390689|gb|ADO68148.1| Prolyl oligopeptidase family protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 681

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 118/331 (35%), Gaps = 71/331 (21%)

Query: 175 SRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            RI +V  +    +   +  L ++  DG+N R LT   D    +P ++P+ + + + +  
Sbjct: 40  QRIAYVLRTTDLEANRGRTDLWLVHADGSNSRQLTSHPDG-DNQPVWAPDGKSLFFLSTR 98

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------- 277
                +V+ +       P ++      + +   S +G R  ++++               
Sbjct: 99  -GGSSQVWRLPID-GGEPTQVTQLPLDVGSFALSPDGSRLAVALEVFPDCATLECTPERV 156

Query: 278 -------------------------KDEAMDIYSVDLQSNATERLTNTLFINI------- 305
                                    +     +++V +   A   L   +  +        
Sbjct: 157 EARKKAKTRGRVYDTLFIRHWDAWNEGLRSHLFAVPVAGGAAVDLMKGMDADSPTKPYGG 216

Query: 306 --SASYSPDSSQIVFESDREGKEQLYVMQSN--------GSDQKRISQDKEASYFDPVWS 355
               +++PD   +VF +   G+++ +    +         +  ++++    A+   PV+S
Sbjct: 217 PEEFTFTPDGQGVVFTARDVGRQEAWSTDLDLFLAPVDGKTPPRKLTTANRATDTQPVFS 276

Query: 356 PQGDLIAFTKFSGEKFA---IGVMKKD--GSQERLLVEDSNLQAP--TWSPSGRSLIFSR 408
           P G  +A+       F    + V+ +      ER+L    +  A    WS  G++L  S 
Sbjct: 277 PDGKTLAYLAMERPGFEADRLRVILRAWPSGAERVLTAQWDRSADGLAWSADGKTLFTSA 336

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
             +G   +  ++ID+       +  P +A+D
Sbjct: 337 YNEGQHPA--FAIDVASGQVRALTAPGHAAD 365



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 86/249 (34%), Gaps = 65/249 (26%)

Query: 260 ILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           + +PR S +G+R    ++           D++ V    + + +LT+    +    ++PD 
Sbjct: 30  VSSPRVSPDGQRIAYVLRTTDLEANRGRTDLWLVHADGSNSRQLTSHPDGDNQPVWAPDG 89

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----------- 362
             + F S R G  Q++ +  +G +  +++Q           SP G  +A           
Sbjct: 90  KSLFFLSTRGGSSQVWRLPIDGGEPTQVTQL-PLDVGSFALSPDGSRLAVALEVFPDCAT 148

Query: 363 ------------------------FTKF-----SGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                                   F +       G +  +  +   G     L++  +  
Sbjct: 149 LECTPERVEARKKAKTRGRVYDTLFIRHWDAWNEGLRSHLFAVPVAGGAAVDLMKGMDAD 208

Query: 394 AP----------TWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNGRN-ETLINTPAYA 437
           +P          T++P G+ ++F+ +  G      T   L+   ++G+     + T   A
Sbjct: 209 SPTKPYGGPEEFTFTPDGQGVVFTARDVGRQEAWSTDLDLFLAPVDGKTPPRKLTTANRA 268

Query: 438 SD--PQWVG 444
           +D  P +  
Sbjct: 269 TDTQPVFSP 277



 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/298 (13%), Positives = 89/298 (29%), Gaps = 67/298 (22%)

Query: 214 LFEPRFSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           +  PR SP+ Q++AY       +         +        +++ +       P ++ +G
Sbjct: 30  VSSPRVSPDGQRIAYVLRTTDLEANRGRTDLWLVHADGSNSRQLTSHPDGDNQPVWAPDG 89

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------------ 317
           K       +  +  ++ + +      ++T       S + SPD S++             
Sbjct: 90  KSLFFLSTRGGSSQVWRLPIDGGEPTQVTQLPLDVGSFALSPDGSRLAVALEVFPDCATL 149

Query: 318 -----------------------FESDREG-----KEQLYVMQSNGSDQKRISQDKEAS- 348
                                  F    +      +  L+ +   G     + +  +A  
Sbjct: 150 ECTPERVEARKKAKTRGRVYDTLFIRHWDAWNEGLRSHLFAVPVAGGAAVDLMKGMDADS 209

Query: 349 ----YFDP---VWSPQGDLIAFTKFSGEKFAIGVMKKDG--------SQERLLVE--DSN 391
               Y  P    ++P G  + FT     +        D         +  R L     + 
Sbjct: 210 PTKPYGGPEEFTFTPDGQGVVFTARDVGRQEAWSTDLDLFLAPVDGKTPPRKLTTANRAT 269

Query: 392 LQAPTWSPSGRSLIF-SRKKDGDTGSKLYSI---DLNGRNETLINTPAYASDP-QWVG 444
              P +SP G++L + + ++ G    +L  I     +G    L      ++D   W  
Sbjct: 270 DTQPVFSPDGKTLAYLAMERPGFEADRLRVILRAWPSGAERVLTAQWDRSADGLAWSA 327



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 66/184 (35%), Gaps = 18/184 (9%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQ--------SNATERLTN-TLFINISASYSPDSS 314
            F+ +G+  + + +     + +S DL              +LT      +    +SPD  
Sbjct: 221 TFTPDGQGVVFTARDVGRQEAWSTDLDLFLAPVDGKTPPRKLTTANRATDTQPVFSPDGK 280

Query: 315 QIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            + + + +R G    + ++ +       ++ ++   + S     WS  G  +  + ++  
Sbjct: 281 TLAYLAMERPGFEADRLRVILRAWPSGAERVLTAQWDRSADGLAWSADGKTLFTSAYNEG 340

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +     +     Q R L    +       P +G  ++++        + L+S+  +G + 
Sbjct: 341 QHPAFAIDVASGQVRALTAPGHAADVQ--PLAGGRILYTFDTL-KAPADLFSLAGDGTDA 397

Query: 429 TLIN 432
             + 
Sbjct: 398 RPLT 401



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 11/186 (5%)

Query: 192 SLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRI 246
            L +   DG    R LT +      +P FSP+ + +AY   +      D LRV L     
Sbjct: 247 DLFLAPVDGKTPPRKLTTANRATDTQPVFSPDGKTLAYLAMERPGFEADRLRVILRAWPS 306

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINI 305
                    +        +S++GK    S   +     +++D+ S     LT      ++
Sbjct: 307 GAERVLTAQWDRSADGLAWSADGKTLFTSAYNEGQHPAFAIDVASGQVRALTAPGHAADV 366

Query: 306 SASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
                    +I++  D       L+ +  +G+D + +++    +     +    +   F 
Sbjct: 367 QPL---AGGRILYTFDTLKAPADLFSLAGDGTDARPLTRANPEALAAIRFG-DSEPFTFA 422

Query: 365 KFSGEK 370
            ++GEK
Sbjct: 423 GWNGEK 428


>gi|197118869|ref|YP_002139296.1| surface protein [Geobacter bemidjiensis Bem]
 gi|197088229|gb|ACH39500.1| surface protein, putative [Geobacter bemidjiensis Bem]
          Length = 970

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 91/256 (35%), Gaps = 21/256 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--S 258
                    + + L  PRFSP+  ++A+   D  +   V + D       K +  FR  S
Sbjct: 305 FTPLTSVNDQGENLTNPRFSPDGSRIAFTRRDPNEHTSVVVTDASGK---KVLAQFRRQS 361

Query: 259 MILAPRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
              +  +S +GK    +  +     +   D+Y  DL    T R+T    +   A  +PD 
Sbjct: 362 SDGSLSWSPDGKSVYFTQAEIDRGFNTYQDLYVRDLGRGETRRITKGERL-GDAQIAPDG 420

Query: 314 SQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             +       G + L ++  +  +    ++++         P +SP G  I +       
Sbjct: 421 KTVAAVISSRGSQNLALLDLSQGEKPQPRQVTSYSLERVASPNFSPDGRSICYVLTDNTG 480

Query: 371 F-AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             A+ +       +R L         P + P G ++ +   + G     L++ DL G   
Sbjct: 481 MSALRIYDTVDKTDRALFRASHTFAFPVFGPDGSTIFYISDETG--VFNLFAYDLKGGAS 538

Query: 429 TLIN---TPAYASDPQ 441
             ++   T A    P 
Sbjct: 539 YQVSHLLTGAIQPAPA 554



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 78/212 (36%), Gaps = 4/212 (1%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-YATYD 232
           + + ++ +++ +         +  RD         ++ + L + + +P+ + VA   +  
Sbjct: 371 DGKSVYFTQAEIDRGFNTYQDLYVRDLGRGETRRITKGERLGDAQIAPDGKTVAAVISSR 430

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQ 290
               L +  +       P+++ ++    + +P FS +G+     +  +     +   D  
Sbjct: 431 GSQNLALLDLSQGEKPQPRQVTSYSLERVASPNFSPDGRSICYVLTDNTGMSALRIYDTV 490

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 L           + PD S I + SD  G   L+     G    ++S     +  
Sbjct: 491 DKTDRALFRASHTFAFPVFGPDGSTIFYISDETGVFNLFAYDLKGGASYQVSHLLTGA-I 549

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            P  +P G  +  + +S + F I  M+ D S+
Sbjct: 550 QPAPAPDGSSMLLSSYSSKGFKIARMELDRSR 581



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 62/157 (39%), Gaps = 16/157 (10%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAF 363
            +  +SPD S+I F   R+  E   V+ ++ S +K ++   +++S     WSP G  + F
Sbjct: 319 TNPRFSPDGSRIAFTR-RDPNEHTSVVVTDASGKKVLAQFRRQSSDGSLSWSPDGKSVYF 377

Query: 364 TKFS-GEKFA----IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           T+      F     + V      + R + +   L     +P G+++       G     L
Sbjct: 378 TQAEIDRGFNTYQDLYVRDLGRGETRRITKGERLGDAQIAPDGKTVAAVISSRGSQNLAL 437

Query: 419 YSID---------LNGRNETLINTPAYASDPQWVGFM 446
             +          +   +   + +P ++ D + + ++
Sbjct: 438 LDLSQGEKPQPRQVTSYSLERVASPNFSPDGRSICYV 474


>gi|291485687|dbj|BAI86762.1| hypothetical protein BSNT_04770 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 657

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 80/222 (36%), Gaps = 49/222 (22%)

Query: 259 MILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +  P+++ +G RA     +          +I+  + ++  +   T+    +    +SPD
Sbjct: 15  SVTDPQYAPDGTRAAYVKSQVNQEKDSYTSNIWIYETKTGGSVPWTHGEKRSTDPRWSPD 74

Query: 313 SSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              + F SDREG   QLY+M + G + ++++ D       P+WSP G+ I  T   GE  
Sbjct: 75  GCTLAFISDREGDAAQLYMMSAEGGEARKLT-DIPYGVSKPIWSPDGESILVTVSLGEGG 133

Query: 372 AIG------------------VMKKDGSQER-------------------LLVEDSNLQA 394
            I                     K+DG                       L    ++   
Sbjct: 134 NIDDREKTEQDSYEPVEVQGLSYKRDGKGLTRGAYAQLVLVSVKSGEMKELTSHKADHGD 193

Query: 395 PTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLIN 432
           P +SP G+ L+FS       D      +Y + L   +   + 
Sbjct: 194 PAFSPDGKWLVFSANLTETDDASKPHDVYIMSLESGDLKQVT 235



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/317 (14%), Positives = 101/317 (31%), Gaps = 72/317 (22%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDR---DGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           +R  +V   V       +  +       G ++ +     ++   +PR+SP+   +A+ + 
Sbjct: 26  TRAAYVKSQVNQEKDSYTSNIWIYETKTGGSVPWT--HGEKRSTDPRWSPDGCTLAFISD 83

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------------- 277
            + D  ++Y+M        +++ +    +  P +S +G+  L++V               
Sbjct: 84  REGDAAQLYMMSAE-GGEARKLTDIPYGVSKPIWSPDGESILVTVSLGEGGNIDDREKTE 142

Query: 278 ----------------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                                 +     +  V ++S   + LT+    +   ++SPD   
Sbjct: 143 QDSYEPVEVQGLSYKRDGKGLTRGAYAQLVLVSVKSGEMKELTSHKADHGDPAFSPDGKW 202

Query: 316 IVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--- 366
           +VF +      D      +Y+M     D K+++  + +        P G  +A       
Sbjct: 203 LVFSANLTETDDASKPHDVYIMSLESGDLKQVTPHRGSFGSSSFS-PDGRYLALLGNEKE 261

Query: 367 --SGEKFAIGVMKKDGSQERLLVE----------------DSNLQAPTWSPSGRSLIFSR 408
             +       +   +  +   L E                    Q P W+   +      
Sbjct: 262 YKNATLSKAWLYDIEQGRLTCLTEMLDVHLADALIGDSLIGGAEQRPIWTKDSQGFYVIG 321

Query: 409 KKDGDTGSKLYSIDLNG 425
              G TG  +Y I + G
Sbjct: 322 TDQGSTG--IYYISIEG 336



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 80/240 (33%), Gaps = 49/240 (20%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNG 269
           + +P+++P+  + AY           Y  +  I            +       PR+S +G
Sbjct: 16  VTDPQYAPDGTRAAYVKSQVNQEKDSYTSNIWIYETKTGGSVPWTHGEKRSTDPRWSPDG 75

Query: 270 KRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------- 321
                   ++  A  +Y +  +     +LT+  +      +SPD   I+           
Sbjct: 76  CTLAFISDREGDAAQLYMMSAEGGEARKLTDIPYGVSKPIWSPDGESILVTVSLGEGGNI 135

Query: 322 ----------------------REGKE-------QLYVMQSNGSDQKRISQDKEASYFDP 352
                                 R+GK        QL ++     + K ++  K A + DP
Sbjct: 136 DDREKTEQDSYEPVEVQGLSYKRDGKGLTRGAYAQLVLVSVKSGEMKELTSHK-ADHGDP 194

Query: 353 VWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
            +SP G  + F+        + +   + +M  +    + +     +  + ++SP GR L 
Sbjct: 195 AFSPDGKWLVFSANLTETDDASKPHDVYIMSLESGDLKQVTPHRGSFGSSSFSPDGRYLA 254



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 38/105 (36%), Gaps = 9/105 (8%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVED-SNLQAPTWSPS 400
           S  DP ++P G   A+ K    +        I + +                  P WSP 
Sbjct: 15  SVTDPQYAPDGTRAAYVKSQVNQEKDSYTSNIWIYETKTGGSVPWTHGEKRSTDPRWSPD 74

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
           G +L F   ++GD  ++LY +   G     L + P   S P W  
Sbjct: 75  GCTLAFISDREGD-AAQLYMMSAEGGEARKLTDIPYGVSKPIWSP 118


>gi|94971219|ref|YP_593267.1| peptidase S9, prolyl oligopeptidase active site region [Candidatus
           Koribacter versatilis Ellin345]
 gi|94553269|gb|ABF43193.1| peptidase S9, prolyl oligopeptidase active site region [Candidatus
           Koribacter versatilis Ellin345]
          Length = 688

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 64/353 (18%), Positives = 125/353 (35%), Gaps = 86/353 (24%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           + +      G + +       S+ +    N + ++   G   R LT    +  F  RFSP
Sbjct: 35  VAEPYLSPDGKWAA-FTVTDVSLETNKKTNHIWIVPVAGGEARQLTNYSGEDNF--RFSP 91

Query: 222 NQQKVAYATYDDEDILRVYLMD-----TRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           + +  A A  D E   +VY+ D       +   P+++ +  + + A  +S +G+  L   
Sbjct: 92  DGKS-ALAITDAEGSSQVYVQDFDTTTGTLTGDPRKVTSISTEVSAATWSPDGRSILFVS 150

Query: 277 -------------QKDE---------------------------AMDIYSVDLQSNATER 296
                        Q+D+                              ++   L+      
Sbjct: 151 AVWPDCKDDACNKQRDDERSQSKVKAQIFTHLLYRHWNAYGNGKRSHLFIQSLEGGEPLD 210

Query: 297 LTNTLFINISA---------SYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRI 341
           LT     ++           S+SPD  +I + S+            ++V+   G   K+I
Sbjct: 211 LTPGDH-DVPPFSLGGQDQYSFSPDGKEIAYASNLDEVEATSTNTDIFVVPVTGGTPKKI 269

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVE--DSNLQA 394
           S     +   P++SP G  IAF   +      ++F + + ++   +   L +  D  +++
Sbjct: 270 ST-SPGADSTPLYSPDGKYIAFRSQARAGYESDRFRLMLYERATGKTTELTQGFDGWVES 328

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
             W P+ R L F+ +  G+    +Y ++L G    L           W GF D
Sbjct: 329 IVWHPNSRGLFFTSELKGEAP--VYWVELQGHPIEL-----------WAGFND 368



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 84/308 (27%), Gaps = 59/308 (19%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           A  +++   +       D  S +        S +                    S    +
Sbjct: 75  ARQLTNYSGEDNFRFSPDGKSALAITDAEGSSQVYVQDFDTTTGTLTGDPRKVTSISTEV 134

Query: 215 FEPRFSPNQQKVAYAT------------------------------YDDEDILRVYLMDT 244
               +SP+ + + + +                              +        Y    
Sbjct: 135 SAATWSPDGRSILFVSAVWPDCKDDACNKQRDDERSQSKVKAQIFTHLLYRHWNAYGNGK 194

Query: 245 RIDRAPKRIGNFRSMILAP----------------RFSSNGKRALISVQKDE------AM 282
           R     + +     + L P                 FS +GK    +   DE        
Sbjct: 195 RSHLFIQSLEGGEPLDLTPGDHDVPPFSLGGQDQYSFSPDGKEIAYASNLDEVEATSTNT 254

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-REG----KEQLYVMQSNGSD 337
           DI+ V +     ++++ +   + +  YSPD   I F S  R G    + +L + +     
Sbjct: 255 DIFVVPVTGGTPKKISTSPGADSTPLYSPDGKYIAFRSQARAGYESDRFRLMLYERATGK 314

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              ++Q  +      VW P    + FT     +  +  ++  G    L            
Sbjct: 315 TTELTQGFDGWVESIVWHPNSRGLFFTSELKGEAPVYWVELQGHPIELWA--GFNDGCQV 372

Query: 398 SPSGRSLI 405
           +P+G  L+
Sbjct: 373 TPAGTFLV 380


>gi|319901098|ref|YP_004160826.1| peptidase S41 [Bacteroides helcogenes P 36-108]
 gi|319416129|gb|ADV43240.1| peptidase S41 [Bacteroides helcogenes P 36-108]
          Length = 1084

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 74/204 (36%), Gaps = 30/204 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R S +GK      + D    IY V ++     +LT       +  +SPDS QI F SDR 
Sbjct: 29  RISPDGKEIAFCYKGD----IYKVPVKGGTAMQLTTQDSYECTPVWSPDSKQIAFASDRY 84

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------A 372
           G   ++VM +NG   +R++ +  A      ++P G  I F+    +              
Sbjct: 85  GNFDIFVMPANGGTARRLTTNS-AGELPSTFTPDGKYILFSASIQDAATSALFPTTAMTE 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-----------DTGSKLYSI 421
           +  +   G +   ++     +A  +  +G    F + + G                ++  
Sbjct: 144 LYKVPSTGGRTEQVLGTP-AEAVCFGKTGDKF-FYQDRKGFEDEWRKHHTSSITRDVWMY 201

Query: 422 DL-NGRNETLINTPAYASDPQWVG 444
           D+  G++  L        +P    
Sbjct: 202 DIRTGKHTNLTRREGEDRNPVLSP 225



 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 77/222 (34%), Gaps = 35/222 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R SP+ +++A+      DI +V +          ++    S    P +S + K+   +  
Sbjct: 29  RISPDGKEIAFCY--KGDIYKVPVK----GGTAMQLTTQDSYECTPVWSPDSKQIAFASD 82

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKE 326
           +    DI+ +        RLT      + ++++PD   I+F +                 
Sbjct: 83  RYGNFDIFVMPANGGTARRLTTNSAGELPSTFTPDGKYILFSASIQDAATSALFPTTAMT 142

Query: 327 QLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAI 373
           +LY + S G   +++     EA  F       GD   +               S     +
Sbjct: 143 ELYKVPSTGGRTEQVLGTPAEAVCFGKT----GDKFFYQDRKGFEDEWRKHHTSSITRDV 198

Query: 374 GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            +      +   L   +   + P  SP G +L F  +++G T
Sbjct: 199 WMYDIRTGKHTNLTRREGEDRNPVLSPDGETLFFLSERNGGT 240



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 94/263 (35%), Gaps = 32/263 (12%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +R+L+ S +  L    +  + +   Y   +     ++ +   R DR       F S  
Sbjct: 263 HPVRFLSISNEGTLC---YGYDGE--IYTQQNGASPQKLDVEIIRDDRPQIAGFTFSSGA 317

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +   S +GK+    V+     +++        T+++T T       S+ PD+  + + S
Sbjct: 318 TSGTVSPDGKQIAFIVRG----EVFVTSTDYTTTKQITATAAREAGLSFGPDNRTLAYAS 373

Query: 321 DREGKEQLYVM------QSNGSDQKRISQD-----KEASYFDPVWSPQGDLIAFTKFSGE 369
           +R G  QL++         N  +   I ++            P +SP G  +AF +    
Sbjct: 374 ERNGNWQLFLASIVRKEDPNFPNATLIKEEALLPSTTVKRAYPQFSPDGKELAFIEDRN- 432

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS--LIFSRKKDGDTGSK-LYS 420
              + V+       R + + S           +WSP G+   L F   K        L S
Sbjct: 433 --RLMVLNLKTRNVRQITDGSTWYGTSGGFDYSWSPDGKWFTLEFIGNKHDPYSDVGLVS 490

Query: 421 IDLNGRNETLINTPAYASDPQWV 443
               G    L N+   +  P++V
Sbjct: 491 AQGGGEITNLTNSGYTSGSPRFV 513



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 75/216 (34%), Gaps = 30/216 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A+    +        + +      K+I    +      F  + +    + +
Sbjct: 321 TVSPDGKQIAFIVRGE------VFVTSTDYTTTKQITATAAREAGLSFGPDNRTLAYASE 374

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS------------ASYSPDSSQIVFESDREGK 325
           ++    ++   +         N   I                 +SPD  ++ F  DR   
Sbjct: 375 RNGNWQLFLASIVRKEDPNFPNATLIKEEALLPSTTVKRAYPQFSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+     + ++I+        +  FD  WSP G    + F     + +  +G++  
Sbjct: 432 NRLMVLNLKTRNVRQITDGSTWYGTSGGFDYSWSPDGKWFTLEFIGNKHDPYSDVGLVSA 491

Query: 379 DGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            G  E   L        +P +   G +++F+ ++ G
Sbjct: 492 QGGGEITNLTNSGYTSGSPRFVLDGNAILFTTERYG 527



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 119/356 (33%), Gaps = 52/356 (14%)

Query: 114 GRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI--SDDIYQSITGEK 170
           G V  +GK     V   ++ V        K+  ++ A  R+   +    +      +   
Sbjct: 320 GTVSPDGKQIAFIVRGEVF-VTSTDYTTTKQITATAA--REAGLSFGPDNRTLAYASERN 376

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G++   +  +           +L            L PS       P+FSP+ +++A+  
Sbjct: 377 GNWQLFLASIVRKEDPNFPNATLI-------KEEALLPSTTVKRAYPQFSPDGKELAF-- 427

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--RFSSNGKR--ALISVQK-DEAMDIY 285
            +D + L V  + TR  R       +          +S +GK         K D   D+ 
Sbjct: 428 IEDRNRLMVLNLKTRNVRQITDGSTWYGTSGGFDYSWSPDGKWFTLEFIGNKHDPYSDVG 487

Query: 286 SVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREG-----------KEQLYVMQS 333
            V  Q       LTN+ + + S  +  D + I+F ++R G              L  +  
Sbjct: 488 LVSAQGGGEITNLTNSGYTSGSPRFVLDGNAILFTTERYGMRAHASWGSQDDAMLVFLNQ 547

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-----------------FAIGVM 376
           +  D+  +S++ +      + S Q          G+                    + + 
Sbjct: 548 DSYDKFCLSKE-DYELRKELESEQKKSKEKDNSKGKNEKKRTGKEDKDTTKVQEIVVDLK 606

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +    RL    SN+ +   S  G +L +    +G  G  ++ +DL  +   L++
Sbjct: 607 NIEDRIVRLTPNSSNMGSALISKDGETLYYLAAFEG--GFDMWKMDLRKKETKLLH 660


>gi|226226684|ref|YP_002760790.1| hypothetical protein GAU_1278 [Gemmatimonas aurantiaca T-27]
 gi|226089875|dbj|BAH38320.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 441

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 56/267 (20%), Positives = 108/267 (40%), Gaps = 38/267 (14%)

Query: 214 LFEPRFSPNQQKVAYA-TYDDEDILRVYLMDT--RIDRAPKRIGNFRSMILA--PRFSSN 268
           +F+   S + + + +  T      L    +D+  R       +    S +LA     S +
Sbjct: 165 VFDASVSSDGRLMVFTCTTGHGTTLCKATLDSVMRAQMPGAILSTAFSALLADQAAISPD 224

Query: 269 GKRALISVQKDEAM-------DIYSVDLQSNATERLT---NTLFINISASYSP---DSS- 314
           G +      +           DIY ++L  +   RLT          S ++SP   D + 
Sbjct: 225 GTQVAFRGWQPGGPVGLFNPGDIYVMNLDGSNLTRLTAAERGRMSYASPAWSPRRIDGAY 284

Query: 315 QIVFESD-REGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SG 368
           ++ +  + R+G      +L  M+++G+    ++ D   S  +P WSP G  +AF +  + 
Sbjct: 285 RLAYAREQRDGDGYAVSRLESMRADGTAMLALTIDTTGSDTEPAWSPDGARVAFVRRGAA 344

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQ--------APTWSPSGRSLIFSRKK---DGDTGSK 417
            +  +  ++ DG   R + E + L+        AP+WSP G+ L F             +
Sbjct: 345 ARGDLWAVQLDG-HARPVAEHALLENELDDVQRAPSWSPDGKRLAFISAHEILGDFYNWQ 403

Query: 418 LYSIDLNGRNETL-INTPAYASDPQWV 443
           +YS+D +G +     +     ++P WV
Sbjct: 404 VYSVDASGTDLRRHTSVAREHANPVWV 430



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 94/259 (36%), Gaps = 36/259 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S  +  +A+ T     +L   +         +R+ +F   +     SS+G+  + +    
Sbjct: 126 SFERPWLAHTTTPVGGLLSEDVPAETPADTVRRVMDFSG-VFDASVSSDGRLMVFTCTTG 184

Query: 280 EAMDIYSVDLQSNATERL------TNTLF-INISASYSPDSSQIVFESDREGKE------ 326
               +    L S    ++      T     +   A+ SPD +Q+ F   + G        
Sbjct: 185 HGTTLCKATLDSVMRAQMPGAILSTAFSALLADQAAISPDGTQVAFRGWQPGGPVGLFNP 244

Query: 327 -QLYVMQSNGSDQKRIS--QDKEASYFDPVWSP---QGDL-IAFTK--FSGEKFAIGV-- 375
             +YVM  +GS+  R++  +    SY  P WSP    G   +A+ +    G+ +A+    
Sbjct: 245 GDIYVMNLDGSNLTRLTAAERGRMSYASPAWSPRRIDGAYRLAYAREQRDGDGYAVSRLE 304

Query: 376 -MKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI- 431
            M+ DG+    L      +   P WSP G  + F R +       L+++ L+G    +  
Sbjct: 305 SMRADGTAMLALTIDTTGSDTEPAWSPDGARVAFVR-RGAAARGDLWAVQLDGHARPVAE 363

Query: 432 ------NTPAYASDPQWVG 444
                         P W  
Sbjct: 364 HALLENELDDVQRAPSWSP 382



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 54/156 (34%), Gaps = 15/156 (9%)

Query: 167 TGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +  + D   R+ +   +    G   + L  M  DG  +  LT        EP +SP+  +
Sbjct: 276 SPRRIDGAYRLAYAREQRDGDGYAVSRLESMRADGTAMLALTIDTTGSDTEPAWSPDGAR 335

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNF-------RSMILAPRFSSNGKRALISVQK 278
           VA+         R  L   ++D   + +            +  AP +S +GKR       
Sbjct: 336 VAFV--RRGAAARGDLWAVQLDGHARPVAEHALLENELDDVQRAPSWSPDGKRLAFISAH 393

Query: 279 D-----EAMDIYSVDLQSNATERLTNTLFINISASY 309
           +         +YSVD       R T+    + +  +
Sbjct: 394 EILGDFYNWQVYSVDASGTDLRRHTSVAREHANPVW 429


>gi|147767869|emb|CAN71280.1| hypothetical protein VITISV_027089 [Vitis vinifera]
          Length = 677

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 65/284 (22%), Positives = 98/284 (34%), Gaps = 61/284 (21%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K  L ++  DG+  +  T  +D+  F   +SP ++ V Y +              +    
Sbjct: 389 KGGLKIVKSDGS--KRWTVLKDRTAFYNSWSPTEKHVIYTSXGP------IFESVKATVQ 440

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             RI           F         S   D+  DI           R       N   S 
Sbjct: 441 IARI----------SFDP-------SYLDDDREDI---PADVKILTR--EETGNNAFPSC 478

Query: 310 SPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKF 366
           SPD   +VF S R G + LY++ + NG  +  I Q  E  + D  P WSP G LIAF+  
Sbjct: 479 SPDGKSVVFRSGRSGNKNLYIIDAVNGELEGGIRQLTEGXWIDTMPSWSPDGKLIAFSSN 538

Query: 367 SGEK-----FAIGVMKKDGSQERLL----------VEDSNLQAPTWSPSGRSLIFSRKKD 411
                    F+I V++ DGS  R +          V+   +    +S     L+F+    
Sbjct: 539 RHNPDNLNAFSIYVIRPDGSDLRRVYVAGSEGSVDVDRERINHVCFSADCEWLLFAANLG 598

Query: 412 GDTG------------SKLYSIDLNGRNETLINTPAY-ASDPQW 442
           G T               L+ + L+G     +    Y    P W
Sbjct: 599 GXTAEPISLPNQFQPYGDLFVVRLDGSGLKRLTWNGYENGTPAW 642



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 99/318 (31%), Gaps = 36/318 (11%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           +S  +    I+       T      + RI   +    S      +  +D         + 
Sbjct: 255 SSISEAPRRITPPRVHCFTPAAMQGSKRIAVATRRKGSNFRHIEIFDIDSKKFYPVTESL 314

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDIL--RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           + +   + P  SP    + Y  +  E             +      +   R     P FS
Sbjct: 315 NPNFHHYNPFVSPECGFLGYHRFRGESSPGESTIPHLDPVXSPINELRMLRLNGSFPXFS 374

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLT----NTLFINISASYSPDSSQIVFES-- 320
             G         D         ++S+ ++R T     T F N   S+SP    +++ S  
Sbjct: 375 PAGDLIAF--NHDFEAKGGLKIVKSDGSKRWTVLKDRTAFYN---SWSPTEKHVIYTSXG 429

Query: 321 ----DREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPVWSPQGDLIAFTK 365
                 +   Q+  +  + S           D K +++++  +   P  SP G  + F  
Sbjct: 430 PIFESVKATVQIARISFDPSYLDDDREDIPADVKILTREETGNNAFPSCSPDGKSVVFRS 489

Query: 366 FSGEKFAIGVMKK-DG---SQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSK--- 417
                  + ++   +G      R L E   +   P+WSP G+ + FS  +          
Sbjct: 490 GRSGNKNLYIIDAVNGELEGGIRQLTEGXWIDTMPSWSPDGKLIAFSSNRHNPDNLNAFS 549

Query: 418 LYSIDLNGRNETLINTPA 435
           +Y I  +G +   +    
Sbjct: 550 IYVIRPDGSDLRRVYVAG 567



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 59/313 (18%), Positives = 95/313 (30%), Gaps = 89/313 (28%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVY-------LMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            P +S +   + +    D+    ++          + I  AP+RI   R     P     
Sbjct: 221 WPTWSGD-SNLYFHRQADDGWWSIFSVTLPEXFQSSSISEAPRRITPPRVHCFTPAAMQG 279

Query: 269 GKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFIN---------------------- 304
            KR  ++ ++  +    I   D+ S     +T +L  N                      
Sbjct: 280 SKRIAVATRRKGSNFRHIEIFDIDSKKFYPVTESLNPNFHHYNPFVSPECGFLGYHRFRG 339

Query: 305 -----------------------------ISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                                            +SP    I F  D E K  L +++S+G
Sbjct: 340 ESSPGESTIPHLDPVXSPINELRMLRLNGSFPXFSPAGDLIAFNHDFEAKGGLKIVKSDG 399

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGS-------- 381
           S  KR +  K+ + F   WSP    + +T              I  +  D S        
Sbjct: 400 S--KRWTVLKDRTAFYNSWSPTEKHVIYTSXGPIFESVKATVQIARISFDPSYLDDDRED 457

Query: 382 ---QERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-----LNGRNETLI 431
                ++L   E  N   P+ SP G+S++F   + G     LY ID     L G    L 
Sbjct: 458 IPADVKILTREETGNNAFPSCSPDGKSVVFRSGRSG--NKNLYIIDAVNGELEGGIRQLT 515

Query: 432 NTPAYASDPQWVG 444
                 + P W  
Sbjct: 516 EGXWIDTMPSWSP 528



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 67/198 (33%), Gaps = 21/198 (10%)

Query: 267 SNGKRALISV--QKDEAMDIYSVDLQ-----SNATERLTNTLFINISASYSPDSSQIVFE 319
             G     +   +     D++S++L        +  RLT    IN +  +  ++  +V+ 
Sbjct: 30  PTGT-IAFTTVGRPHYGFDLFSLNLDPNLINHTSERRLTGGTSINFNGHFLDENQTLVYV 88

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL--IAFTKFSGEKF----AI 373
           S+  G  ++Y ++   +  +++     + Y D      G L  ++  +   + F    A+
Sbjct: 89  SEXSGSPRIYQIRPGVTKPEQLLSVPGSLYHDRPIVKNGRLYFVSAHERPEKPFISWSAV 148

Query: 374 GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN------GR 426
                D      L        +P  S SG+ +  +       G + + +  +        
Sbjct: 149 YSTGLDDKAVVXLTPHGVVDYSPAISRSGKFIAVASYGSRPWGGEFHELHTDIVVFREXE 208

Query: 427 NETLINTPAYASDPQWVG 444
            E  +        P W G
Sbjct: 209 PEKRVVVCERGGWPTWSG 226


>gi|218921786|emb|CAW30774.1| P46GA2.1A [Haemonchus contortus]
          Length = 387

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 88/227 (38%), Gaps = 36/227 (15%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
              A+  +   DI +V      +D    +I            S +GK+ + + ++   +D
Sbjct: 128 SGHAWDVFPTYDIFKVNEYGNVLD----QITKNDVYDSEAFISPDGKKIVHTSKQSGDLD 183

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--------------------E 323
           ++  D+      +LT     +  AS+SPD  +IVF + R                     
Sbjct: 184 LWITDINGALKIQLTKAKGYDGGASFSPDGEKIVFHASRPTGKDKIDIYDHLLKNNLVAT 243

Query: 324 GKEQLYVMQSNG--SDQ--KRISQDKEAS--YFDPVWSPQGDLIAFTKFSG----EKFAI 373
            K +L VM++N    +   +RI  ++E     + P + P    I F+         ++ +
Sbjct: 244 KKMELSVMKANTVCGNVTGERILFNRERGVLDWTPYYHPDNKRIIFSSNMNSTKSNEYHL 303

Query: 374 GVMKKDGSQ-ERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKL 418
            ++ +DG+  ER+        A P +S  G+ +++S  +       L
Sbjct: 304 YIVNEDGTGLERVTFGSGYFNAFPVFSHDGKKVVWSSNRGSTKEGDL 350



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 74/211 (35%), Gaps = 36/211 (17%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             +  ++  G N+       D    E   SP+ +K+ + +    D   + L  T I+ A 
Sbjct: 138 YDIFKVNEYG-NVLDQITKNDVYDSEAFISPDGKKIVHTSKQSGD---LDLWITDINGAL 193

Query: 251 K-RIGNFRSMILAPRFSSNGKRALISVQKDEAMD--------------------IYSVDL 289
           K ++   +       FS +G++ +    +    D                    +  +  
Sbjct: 194 KIQLTKAKGYDGGASFSPDGEKIVFHASRPTGKDKIDIYDHLLKNNLVATKKMELSVMKA 253

Query: 290 QS-----NATERLTNTL--FINISASYSPDSSQIVFESDREGK----EQLYVMQSNGSDQ 338
            +          L N     ++ +  Y PD+ +I+F S+          LY++  +G+  
Sbjct: 254 NTVCGNVTGERILFNRERGVLDWTPYYHPDNKRIIFSSNMNSTKSNEYHLYIVNEDGTGL 313

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +R++         PV+S  G  + ++   G 
Sbjct: 314 ERVTFGSGYFNAFPVFSHDGKKVVWSSNRGS 344



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 64/207 (30%), Gaps = 35/207 (16%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D I ++   +   F S                 L + D +GA ++              F
Sbjct: 151 DQITKNDVYDSEAFISPDGKKIVHTSKQSGDLDLWITDINGA-LKIQLTKAKGYDGGASF 209

Query: 220 SPNQQKVAYATYDDEDILRVYLMD--------------TRIDRAPKRIGNFRS------- 258
           SP+ +K+ +         ++ + D                + +A    GN          
Sbjct: 210 SPDGEKIVFHASRPTGKDKIDIYDHLLKNNLVATKKMELSVMKANTVCGNVTGERILFNR 269

Query: 259 ----MILAPRFSSNGKRALISVQ----KDEAMDIYSVDLQSNATERLTNTLFI-NISASY 309
               +   P +  + KR + S      K     +Y V+      ER+T      N    +
Sbjct: 270 ERGVLDWTPYYHPDNKRIIFSSNMNSTKSNEYHLYIVNEDGTGLERVTFGSGYFNAFPVF 329

Query: 310 SPDSSQIVFESDRE----GKEQLYVMQ 332
           S D  ++V+ S+R     G   L++  
Sbjct: 330 SHDGKKVVWSSNRGSTKEGDLNLFIAD 356



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 69/207 (33%), Gaps = 25/207 (12%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAM--DIYSVDLQSNATE--RLTNTLFINISA 307
           R   F +      F+S+    +            IY ++L        +++  +  + ++
Sbjct: 16  RQLTFENRNTEAYFNSDDTYLVFQATGYGVDCEQIYRLELSRPVETLAKISTGIGTSAAS 75

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + P+S  I++     G      + +     K+++ D          S     +   K  
Sbjct: 76  FFYPNSVDILY----SGNFHKTRVNA-----KKLTNDNRCPQKVCDSSKAKTDLIIKKMC 126

Query: 368 GEK--------FAIGVMKKDGSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKL 418
                      + I  + + G+    + ++    +  + SP G+ ++ + K+ GD    L
Sbjct: 127 ESGHAWDVFPTYDIFKVNEYGNVLDQITKNDVYDSEAFISPDGKKIVHTSKQSGD--LDL 184

Query: 419 YSIDLNGR-NETLINTPAYASDPQWVG 444
           +  D+NG     L     Y     +  
Sbjct: 185 WITDINGALKIQLTKAKGYDGGASFSP 211


>gi|303242868|ref|ZP_07329331.1| Peptidoglycan-binding lysin domain protein [Acetivibrio
           cellulolyticus CD2]
 gi|302589587|gb|EFL59372.1| Peptidoglycan-binding lysin domain protein [Acetivibrio
           cellulolyticus CD2]
          Length = 461

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 60/315 (19%), Positives = 125/315 (39%), Gaps = 28/315 (8%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF----NSRILFVSESVVSGIIKNSLCV 195
           I +++ +     R      S  ++     +   F    + +I+F S        K S+  
Sbjct: 115 IAQRYNTQVDVIRDANQISSPFLFTGEKLKIPYFLPLGSGKIVFTSL----DNEKYSIRS 170

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D      + L          P  SP+++K+A+    + + + +Y  +T    +  +   
Sbjct: 171 FDFQVKEEKVLVSQFVNAGSIPYVSPDEKKLAF--IGENNKVYIYNEETTELISLGQSTE 228

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSS 314
           + +M     +S++  + +        + IY++      T+++T     + S   + PD  
Sbjct: 229 YSTMN----WSADSIKLVYVT--PGNISIYNI-----QTKKITTIDQPDSSYPQWFPDGK 277

Query: 315 QIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +++F+S D  G +QLY ++ +GS++K+I  +    Y +   SP G  I +T  S     I
Sbjct: 278 ELLFQSPDSSGIKQLYRIREDGSNKKQIGNNIWNFYNNVELSPDGSFILYTTPSASVSII 337

Query: 374 GVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSR--KKDGDTGSKLYSIDLNGRNET 429
             ++ +  +   +          P WS     +I+S    + G   S++   +L GRN  
Sbjct: 338 YTLEINTGKIHQVPSGPQGKDYYPKWSTDSTRIIYSSTNYRPGSFYSQINIAELQGRNYQ 397

Query: 430 LINTPAYASDP-QWV 443
                   S P  W+
Sbjct: 398 TYAVSNCFSTPVSWL 412


>gi|291006476|ref|ZP_06564449.1| amidohydrolase [Saccharopolyspora erythraea NRRL 2338]
          Length = 1067

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 77/189 (40%), Gaps = 19/189 (10%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G   ++    D    +++V ++     RLT        AS++PD S +V +   EG 
Sbjct: 2   SPDGSTVVV----DALSTLWAVPIRGGEGRRLTPHAMEATQASWAPDGSSVVCQVYSEGN 57

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             LY++ + G   +R++ +    + +P +SP G  IAF+   G ++ I +      +   
Sbjct: 58  FHLYLVPT-GGTPRRLT-EGPHDHREPSFSPDGRRIAFSSDRGGRYGIHIFDLATGRIAP 115

Query: 386 LVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL-------INTPAYA 437
                  ++ P WSP G  +           + + +++  G    L       +  P + 
Sbjct: 116 WTAPIGEESQPRWSPDGSRMAVVVD-----NAVIDAVNEAGERTRLAEATGARLYAPGWN 170

Query: 438 SDPQWVGFM 446
            +   + ++
Sbjct: 171 PEGSTIAYV 179



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 59/315 (18%), Positives = 102/315 (32%), Gaps = 69/315 (21%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           ++L  +   G   R LTP   +      ++P+   V    Y + +    +L        P
Sbjct: 14  STLWAVPIRGGEGRRLTPHAMEATQA-SWAPDGSSVVCQVYSEGNF---HLYLVPTGGTP 69

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +R+         P FS +G+R   S  +     I+  DL +      T  +       +S
Sbjct: 70  RRLTEGPHDHREPSFSPDGRRIAFSSDRGGRYGIHIFDLATGRIAPWTAPIGEESQPRWS 129

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-- 368
           PD S++    D      +  +   G ++ R+++   A  + P W+P+G  IA+ +  G  
Sbjct: 130 PDGSRMAVVVD---NAVIDAVNEAG-ERTRLAEATGARLYAPGWNPEGSTIAYVRMDGLL 185

Query: 369 ---EKFAIGVMKKDGSQERLLVEDSNLQAPTW--------SPSG------------RSLI 405
              +      +   G+      ED    APTW        +  G            R + 
Sbjct: 186 PRNQGAGSAQVVVGGTVVSAPDEDVFPFAPTWLSATRLLYTADGRIRARELPAGGHRDIA 245

Query: 406 FS-------------------------------RKKDGDTGS-----KLYSIDLNGRNET 429
           FS                                   GD  +      L+  DL GR + 
Sbjct: 246 FSLSAPVRTPEPTAPAAFPEAGRHPVHGIAGPVLSPGGDRIAFCALGDLWVSDLAGRAQR 305

Query: 430 LINTPAYASDPQWVG 444
           L +   +  DP W  
Sbjct: 306 LTHDRFHVCDPAWSP 320



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 89/271 (32%), Gaps = 53/271 (19%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI F S+       +  + + D     I   T    +   +PR+SP+  ++A    +   
Sbjct: 90  RIAFSSDRGG----RYGIHIFDLATGRIAPWTAPIGE-ESQPRWSPDGSRMAVVVDNA-- 142

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-----VQKDEAMDIYSVDLQ 290
              V           +      + + AP ++  G           + +++      V + 
Sbjct: 143 ---VIDAVNEAGERTRLAEATGARLYAPGWNPEGSTIAYVRMDGLLPRNQGAGSAQVVVG 199

Query: 291 SNATERLTNTLFINISASYSP---DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                   +    ++   ++P    ++++++ +D     ++   +      + I+    A
Sbjct: 200 GTVV----SAPDEDVFP-FAPTWLSATRLLYTAD----GRIRARELPAGGHRDIAFSLSA 250

Query: 348 SYF----------------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                                     PV SP GD IAF         + V    G  +RL
Sbjct: 251 PVRTPEPTAPAAFPEAGRHPVHGIAGPVLSPGGDRIAFCALGD----LWVSDLAGRAQRL 306

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             +  ++  P WSP G  + +   + G TGS
Sbjct: 307 THDRFHVCDPAWSPDGDRIAYCTDRSGTTGS 337


>gi|329961886|ref|ZP_08299900.1| WD40-like protein [Bacteroides fluxus YIT 12057]
 gi|328531326|gb|EGF58170.1| WD40-like protein [Bacteroides fluxus YIT 12057]
          Length = 1085

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 83/231 (35%), Gaps = 34/231 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R SPN  ++A+      DI +V            ++    S    P +S +GK+   +  
Sbjct: 29  RISPNGTEIAFCY--KGDIYKV----PATGGTAIQLTTQDSYECTPIWSPDGKQIAFASD 82

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGKE 326
           +    DI+ +       +RLT      + ++++PD  Q++F +                 
Sbjct: 83  RYGNFDIFMMPSGGGNAQRLTTHSANELPSAFTPDGKQVLFSASIQDPASSALFPTGAMT 142

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIG 374
           +LY + S G   +++     A       S  GD   +               S     + 
Sbjct: 143 ELYKVPSTGGRTEQVL-GTPAESVCFDKS--GDKFYYQDRKGFEDEWRKHHTSSITRDVW 199

Query: 375 VMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +      +   L + +   + P  SP G+ L F  +++G T   +YS  ++
Sbjct: 200 MYDIQTGKHTNLTQREGEDRNPVLSPDGQVLFFLSERNGGT-FNVYSFPVS 249



 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 105/293 (35%), Gaps = 34/293 (11%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ------QKVA 227
           + ++LF       G        + +   +I+ +T  +   +     S +           
Sbjct: 226 DGQVLFFLSERNGGTFNVYSFPVSQ-PQSIKEVTSFKTHPVRFLSISDDGTLCYGYDGEI 284

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y         ++ +   R D+      +F +   +   S +GK+    V+     +++  
Sbjct: 285 YTQQPGSSPQKLNVEIVRDDQPQMANLDFSTGATSATVSPDGKQVAFIVRG----EVFVT 340

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD---------- 337
                 T+++T+T       +++PD+  + + S+R+G  QLY+ +    +          
Sbjct: 341 STDYTTTKQITHTASREAGLTFAPDNRTLAYASERDGNWQLYLAKIARKEDLNFPNATLI 400

Query: 338 -QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-- 394
            ++ +          P +SP G  +AF +       + V+  D  + R + + S   +  
Sbjct: 401 KEEVLLPSTTVERTYPQFSPDGKELAFIEDRN---RLMVLNLDTKKVRQVTDGSTWYSTG 457

Query: 395 ----PTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                +WSP G+   L F   +  D  S +  +   G +  +  T +  +   
Sbjct: 458 GGFDYSWSPDGKWFTLEFIGNRH-DPYSDIGLVSAQGDSPIVNLTNSGYTSGS 509



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 77/216 (35%), Gaps = 30/216 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++VA+    +        + +      K+I +  S      F+ + +    + +
Sbjct: 321 TVSPDGKQVAFIVRGE------VFVTSTDYTTTKQITHTASREAGLTFAPDNRTLAYASE 374

Query: 278 KDEAMDIYSV------DLQS------NATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           +D    +Y        DL             L +T        +SPD  ++ F  DR   
Sbjct: 375 RDGNWQLYLAKIARKEDLNFPNATLIKEEVLLPSTTVERTYPQFSPDGKELAFIEDR--- 431

Query: 326 EQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDL--IAFTKFSGEKF-AIGVMKK 378
            +L V+  +    ++++           FD  WSP G    + F     + +  IG++  
Sbjct: 432 NRLMVLNLDTKKVRQVTDGSTWYSTGGGFDYSWSPDGKWFTLEFIGNRHDPYSDIGLVSA 491

Query: 379 DGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            G      L        +P +   G +++F+ ++ G
Sbjct: 492 QGDSPIVNLTNSGYTSGSPRFVLDGNAILFTTERYG 527



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 81/211 (38%), Gaps = 32/211 (15%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  +  +   G     LT  +D     P +SP+ +++A+A+    +   +++M +    
Sbjct: 41  YKGDIYKVPATGGTAIQLTT-QDSYECTPIWSPDGKQIAFASDRYGN-FDIFMMPSG-GG 97

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERL 297
             +R+    +  L   F+ +GK+ L S                  ++Y V      TE++
Sbjct: 98  NAQRLTTHSANELPSAFTPDGKQVLFSASIQDPASSALFPTGAMTELYKVPSTGGRTEQV 157

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSNGSDQKRISQD 344
             T   ++   +     +  ++ DR+G                +++          ++Q 
Sbjct: 158 LGTPAESV--CFDKSGDKFYYQ-DRKGFEDEWRKHHTSSITRDVWMYDIQTGKHTNLTQ- 213

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIG 374
           +E    +PV SP G ++ F ++ +G  F + 
Sbjct: 214 REGEDRNPVLSPDGQVLFFLSERNGGTFNVY 244



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 69/181 (38%), Gaps = 17/181 (9%)

Query: 152 RKIAHTISDD--IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           R+   T + D       +   G++   +  ++          +L            L PS
Sbjct: 356 REAGLTFAPDNRTLAYASERDGNWQLYLAKIARKEDLNFPNATLI-------KEEVLLPS 408

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--RSMILAPRFSS 267
                  P+FSP+ +++A+   +D + L V  +DT+  R       +          +S 
Sbjct: 409 TTVERTYPQFSPDGKELAF--IEDRNRLMVLNLDTKKVRQVTDGSTWYSTGGGFDYSWSP 466

Query: 268 NGKRA---LISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           +GK      I  + D   DI  V  Q  +    LTN+ + + S  +  D + I+F ++R 
Sbjct: 467 DGKWFTLEFIGNRHDPYSDIGLVSAQGDSPIVNLTNSGYTSGSPRFVLDGNAILFTTERY 526

Query: 324 G 324
           G
Sbjct: 527 G 527


>gi|225437689|ref|XP_002279803.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 677

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 93/257 (36%), Gaps = 50/257 (19%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDR 248
           K  L ++  DG+  +  T  +D+  F   +SP ++ V Y +     + ++  +   RI  
Sbjct: 389 KGGLKIVKSDGS--KRWTVLKDRTAFYNSWSPTEKHVIYTSVGPIFESVKATVQIARISF 446

Query: 249 APKRIGNFR---------------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            P  + + R                    P  S +GK  +    +    ++Y +D  +  
Sbjct: 447 DPSYLDDDREDIPADVKILTREETGNNAFPSCSPDGKSVVFRSGRSGNKNLYIIDAVNGE 506

Query: 294 T----ERLTNTLFINISASYSPDSSQIVFESDREGKEQ-----LYVMQSNGSDQKRISQD 344
                 +LT   +I+   S+SPD   I F S+R   +      +YV++ +GSD +R+   
Sbjct: 507 LEGGIRQLTEGPWIDTMPSWSPDGKLIAFSSNRHNPDNLNAFSIYVIRPDGSDLRRVYVA 566

Query: 345 KEASYFDPV--------WSPQGDLIAFTKFSGE----------KFA----IGVMKKDGSQ 382
                 D          +S   + + F    G           +F     + V++ DGS 
Sbjct: 567 GSEGSVDVDRERINHVCFSADCEWLLFAANLGGMTAEPISLPNQFQPYGDLFVVRLDGSG 626

Query: 383 ERLLV-EDSNLQAPTWS 398
            + L         P W 
Sbjct: 627 LKRLTWNGYENGTPAWH 643



 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 99/318 (31%), Gaps = 36/318 (11%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           +S  +    I+       T      + RI   +    S      +  +D         + 
Sbjct: 255 SSISEAPRRITPPRVHCFTPAAMQGSKRIAVATRRKGSNFRHIEIFDIDSKKFYPVTESL 314

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDIL--RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           + +   + P  SP    + Y  +  E             +      +   R     P FS
Sbjct: 315 NPNFHHYNPFVSPECGFLGYHRFRGESSPGESTIPHLDPVVSPINELRMLRLNGSFPSFS 374

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLT----NTLFINISASYSPDSSQIVFES-- 320
             G         D         ++S+ ++R T     T F N   S+SP    +++ S  
Sbjct: 375 PAGDLIAF--NHDFEAKGGLKIVKSDGSKRWTVLKDRTAFYN---SWSPTEKHVIYTSVG 429

Query: 321 ----DREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPVWSPQGDLIAFTK 365
                 +   Q+  +  + S           D K +++++  +   P  SP G  + F  
Sbjct: 430 PIFESVKATVQIARISFDPSYLDDDREDIPADVKILTREETGNNAFPSCSPDGKSVVFRS 489

Query: 366 FSGEKFAIGVMKK-DG---SQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSK--- 417
                  + ++   +G      R L E   +   P+WSP G+ + FS  +          
Sbjct: 490 GRSGNKNLYIIDAVNGELEGGIRQLTEGPWIDTMPSWSPDGKLIAFSSNRHNPDNLNAFS 549

Query: 418 LYSIDLNGRNETLINTPA 435
           +Y I  +G +   +    
Sbjct: 550 IYVIRPDGSDLRRVYVAG 567



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 61/313 (19%), Positives = 98/313 (31%), Gaps = 89/313 (28%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDT-------RIDRAPKRIGNFRSMILAPRFSSN 268
            P +S +   + +    D+    ++ ++         I  AP+RI   R     P     
Sbjct: 221 WPTWSGD-SNLYFHRQADDGWWSIFSVNLPEGFQSSSISEAPRRITPPRVHCFTPAAMQG 279

Query: 269 GKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFIN---------------------- 304
            KR  ++ ++  +    I   D+ S     +T +L  N                      
Sbjct: 280 SKRIAVATRRKGSNFRHIEIFDIDSKKFYPVTESLNPNFHHYNPFVSPECGFLGYHRFRG 339

Query: 305 -----------------------------ISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                                           S+SP    I F  D E K  L +++S+G
Sbjct: 340 ESSPGESTIPHLDPVVSPINELRMLRLNGSFPSFSPAGDLIAFNHDFEAKGGLKIVKSDG 399

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGS-------- 381
           S  KR +  K+ + F   WSP    + +T              I  +  D S        
Sbjct: 400 S--KRWTVLKDRTAFYNSWSPTEKHVIYTSVGPIFESVKATVQIARISFDPSYLDDDRED 457

Query: 382 ---QERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-----LNGRNETLI 431
                ++L   E  N   P+ SP G+S++F   + G     LY ID     L G    L 
Sbjct: 458 IPADVKILTREETGNNAFPSCSPDGKSVVFRSGRSG--NKNLYIIDAVNGELEGGIRQLT 515

Query: 432 NTPAYASDPQWVG 444
             P   + P W  
Sbjct: 516 EGPWIDTMPSWSP 528



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 68/198 (34%), Gaps = 21/198 (10%)

Query: 267 SNGKRALISV--QKDEAMDIYSVDLQ-----SNATERLTNTLFINISASYSPDSSQIVFE 319
             G     +   +     D++S++L        +  RLT    IN +  +  ++  +V+ 
Sbjct: 30  PTGT-IAFTTVGRPHYGFDLFSLNLDPNLINHTSERRLTGGTSINFNGHFLDENQTLVYV 88

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL--IAFTKFSGEKF----AI 373
           S+R G  ++Y ++   +  +++     + Y D      G L  ++  +   + F    A+
Sbjct: 89  SERSGSPRIYQIRPGVTKPEQLLSVPGSLYHDRPIVKNGRLYFVSAHERPEKPFISWSAV 148

Query: 374 GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN------GR 426
                D      L        +P  S SG+ +  +       G + + +  +        
Sbjct: 149 YSTGLDDKAVVQLTPHGVVDYSPAISRSGKFIAVASYGSRPWGGEFHELHTDIVVFRESE 208

Query: 427 NETLINTPAYASDPQWVG 444
            E  +        P W G
Sbjct: 209 PEKRVVVCERGGWPTWSG 226


>gi|224372378|ref|YP_002606750.1| translocation protein TolB [Nautilia profundicola AmH]
 gi|223589129|gb|ACM92865.1| protein TolB [Nautilia profundicola AmH]
          Length = 386

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 112/282 (39%), Gaps = 18/282 (6%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           A +  + H    DI +     +  F  R +  S  V     + ++ + D   +  + +  
Sbjct: 101 AYFPFLVHKAVYDINEYFGLPQAKFLIRKVIYSMLVAP--KQANIYLSDYTLSYKKRIIS 158

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
               +   P+++  +Q V Y T     +  +Y ++ R  +  K + + + +++      +
Sbjct: 159 G--GLNIFPKWADEKQNVIYYT-KLGRLPTLYKLNLRTGKREKILTS-QGLLIVSDVKKD 214

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
             + L+++      D+Y  D+ +    ++T    I+++  +  D  +IVF SDR G   +
Sbjct: 215 --KLLLTLAPTGQPDVYEYDIANKKLTKITKYNGIDVNGKFWGD-DKIVFVSDRYGMPMI 271

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQ 382
           +   +     +R+    +       +    + +  +       FS   F + ++ K+   
Sbjct: 272 FSKDTENGRVQRVLYHGKNQIGVDAY---KNYLVISTRETSNAFSTNTFNLFLVNKNDDS 328

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            + L        P +S  G S++F ++++  +   +  ++ N
Sbjct: 329 LKRLTFKGQNSYPNFSVDGNSIMFIKRENFYSKIGIIRLNEN 370


>gi|229514560|ref|ZP_04404021.1| protease-related protein [Vibrio cholerae TMA 21]
 gi|229348540|gb|EEO13498.1| protease-related protein [Vibrio cholerae TMA 21]
          Length = 1084

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 82/254 (32%), Gaps = 43/254 (16%)

Query: 211 DQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           D     P +      SP+ QK+A+             +          +         P 
Sbjct: 32  DSTQARPTWLRDIALSPDGQKIAFTYAGQ------IWLVPAQGGDAVALTESGVYSETPI 85

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +SS+ +    +  +    D++ + +Q   + RLT     +I  ++S D  Q+ F S R G
Sbjct: 86  WSSDSQSIAFTADRYGLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLG 145

Query: 325 KE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            +             QLY + + G  ++R+      +  D   SP    I +T       
Sbjct: 146 DDKANANVKQGSFMAQLYSVPAAGGREQRVL---PIAISDLAISPSHSDILYTNQPSDEQ 202

Query: 367 -------SGEKFAIG-VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  S     I       G   ++       + P WS  G S+ +  ++ G     +
Sbjct: 203 PWRKGALSDATRDIWQWSPLTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSF--NI 260

Query: 419 YSIDLNGRNETLIN 432
           +    +G     I 
Sbjct: 261 WQQRFDGSEPVQIT 274



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 71/205 (34%), Gaps = 30/205 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G++   +     A  I+ V  Q      LT +   + +  +S DS  I F +DR 
Sbjct: 45  ALSPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSETPIWSSDSQSIAFTADRY 100

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------ 371
           G   ++++   G + +R++    A      +S  G  + F+                   
Sbjct: 101 GLGDVFILSIQGGESRRLTYHG-AKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFM 159

Query: 372 -AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYS 420
             +  +   G +E+ ++    +     SPS   ++++ +             D    ++ 
Sbjct: 160 AQLYSVPAAGGREQRVL-PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQ 218

Query: 421 ID-LNGRNETLINTPAYASDPQWVG 444
              L G++  +        +P W  
Sbjct: 219 WSPLTGKHTQITTFRGEDRNPVWSA 243



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/363 (12%), Positives = 109/363 (30%), Gaps = 89/363 (24%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E   ++S    ++ +     + +   +  + G + R        I +   FS + Q++ 
Sbjct: 81  SETPIWSSDSQSIAFTADRYGLGDVFILSIQGGESRRLTYHGAKDIPY--AFSADGQQLY 138

Query: 228 YATYDDED------------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +++    D            + ++Y +     R  + +      I     S +    L +
Sbjct: 139 FSSRRLGDDKANANVKQGSFMAQLYSVPAAGGREQRVL---PIAISDLAISPSHSDILYT 195

Query: 276 VQK------------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            Q             D   DI+     +    ++T     + +  +S D S + + S++ 
Sbjct: 196 NQPSDEQPWRKGALSDATRDIWQWSPLTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQA 255

Query: 324 GKEQLYVMQSNGSDQKRISQ---------------DKEASYFDPVW-------------- 354
           G   ++  + +GS+  +I+                D    +   +W              
Sbjct: 256 GSFNIWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPV 315

Query: 355 ------SPQGDLIAFTKFSGEKF---------------AIGVMKKDGSQERLLVEDSNLQ 393
                  P G           +                 + V+       + + +    +
Sbjct: 316 SIRRSAMPDGRHNVNFNLEATEMVVAPNAAEVAIVARGDVYVVSLLSGLTQRITDTPEAE 375

Query: 394 -APTWSPSGRSLIFSRKKDGDT---------GSKLYSIDLNGRNETLINTPAYASDPQWV 443
              ++S  G  LI++ +++G           G K +S  L+   E ++ T      P + 
Sbjct: 376 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYS 435

Query: 444 GFM 446
             +
Sbjct: 436 PNL 438



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 341 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDVSFSSDGYRLIYASERE 394

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   +                  LT    + I   YSP+  +IV+   RE +  L
Sbjct: 395 GSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDV-IQPLYSPNLKRIVY---RENRNTL 450

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + I     +     I ++K DGS+ 
Sbjct: 451 KVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEA 510

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNG 425
            + L +    + AP +S  G+ + +     G  D    +   D+ G
Sbjct: 511 PINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDMVVQYDVYG 556



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 99/286 (34%), Gaps = 41/286 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------KVAYATYDDEDILRVYLMDTR 245
           +     DG+    +T  +   +     S           ++       +   +V +   R
Sbjct: 260 IWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRR 319

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +   NF         + N     I  + D    +Y V L S  T+R+T+T    
Sbjct: 320 SAMPDGRHNVNFNLEATEMVVAPNAAEVAIVARGD----VYVVSLLSGLTQRITDTPEAE 375

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPV 353
              S+S D  ++++ S+REG   LY    N             ++  ++ +++     P+
Sbjct: 376 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQD--VIQPL 433

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIF 406
           +SP    I + +       + V   +  +   L++   L +         WSP    ++ 
Sbjct: 434 YSPNLKRIVYRENRNT---LKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVT 490

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGFM 446
             +   +   +L   D +     L  +      P +++D QWV ++
Sbjct: 491 RDRAMSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWL 536



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 19/174 (10%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+  +   ++ + Y+ D        +D   + +      ++ P +S N 
Sbjct: 379 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 438

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR +    ++    +   D++ + T  L +   +      ++S  +SPDS  IV   DR 
Sbjct: 439 KRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV-TRDRA 494

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                + +++ +GS+          S F P +S  G  + +   +     I  M
Sbjct: 495 MSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDM 548


>gi|159901323|ref|YP_001547570.1| hypothetical protein Haur_4812 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159894362|gb|ABX07442.1| hypothetical protein Haur_4812 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 362

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 60/314 (19%), Positives = 108/314 (34%), Gaps = 62/314 (19%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +   +  L   D +G   + L P           SP+ +KVAYAT  +    R+ + D 
Sbjct: 54  RNPAQQAELWRSDANGQGQQLLVPQVSDYSL----SPDGRKVAYATQAEAQPSRIEMFDL 109

Query: 245 RIDRAPKRIGNFRSMILAPRFSS-NG----KRALISVQKDEAMDIYSVDLQSNATERLTN 299
             ++     G+       P +S  +G    +R  IS     +  ++ +         +  
Sbjct: 110 TQNQVITSTGSADWTGYTPNWSPADGVIVYERRTISTGGVGSPKLWLMQPDGTQVSPVVK 169

Query: 300 TLFINISAS--------------------------------------YSPDSSQIVFESD 321
              +    +                                      +SPD  ++V    
Sbjct: 170 GGDVVTFGAHWSNTGRLLGFTDPLRNELVLFDFSDVLRRIPFSGDFDWSPDDQRLVISVL 229

Query: 322 REG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGV 375
           RE     + +L +       Q  ++   +   F PVWSP G  IAF + + E  +  I V
Sbjct: 230 RESQAGFRNELILFDLMTEQQTPLTSQTDTDDFTPVWSPDGTKIAFVRRTREVPRGEIWV 289

Query: 376 MKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTG--SKLYSIDL--NGRNET 429
           +  DGS+ R +          P W+P  + L+++R   G     S +++++L  N     
Sbjct: 290 VNADGSEPRAITAGGGYDNVDPQWTPDSQQLLWTRLTVGSANVPSAIWTVNLAENSEPRV 349

Query: 430 LINTPAYASDPQWV 443
           LI     A    W+
Sbjct: 350 LIENATQAR---WI 360



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 96/239 (40%), Gaps = 22/239 (9%)

Query: 166 ITGEKGDFNSRILFVSESVVSG-IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            T      +  I++   ++ +G +    L +M  DG  +  +    D + F   +S   +
Sbjct: 126 YTPNWSPADGVIVYERRTISTGGVGSPKLWLMQPDGTQVSPVVKGGDVVTFGAHWSNTGR 185

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----VQKDE 280
            + +      D LR  L+        +RI           +S + +R +IS     Q   
Sbjct: 186 LLGFT-----DPLRNELVLFDFSDVLRRIPFSGDFD----WSPDDQRLVISVLRESQAGF 236

Query: 281 AMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSD 337
             ++   DL +     LT+ T   + +  +SPD ++I F        +  ++V+ ++GS+
Sbjct: 237 RNELILFDLMTEQQTPLTSQTDTDDFTPVWSPDGTKIAFVRRTREVPRGEIWVVNADGSE 296

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKK-DGSQERLLVEDSN 391
            + I+        DP W+P    + +T+ +         I  +   + S+ R+L+E++ 
Sbjct: 297 PRAITAGGGYDNVDPQWTPDSQQLLWTRLTVGSANVPSAIWTVNLAENSEPRVLIENAT 355



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 38/87 (43%), Gaps = 7/87 (8%)

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           I F +   ++  +     +G  ++LLV    +   + SP GR + ++ + +    S++  
Sbjct: 50  ILFLRNPAQQAELWRSDANGQGQQLLV--PQVSDYSLSPDGRKVAYATQAEAQP-SRIEM 106

Query: 421 IDLNGRNETLINTPAY---ASDPQWVG 444
            DL  +N+ + +T +       P W  
Sbjct: 107 FDLT-QNQVITSTGSADWTGYTPNWSP 132


>gi|71282123|ref|YP_268181.1| hypothetical protein CPS_1438 [Colwellia psychrerythraea 34H]
 gi|71147863|gb|AAZ28336.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
          Length = 698

 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 50/284 (17%), Positives = 112/284 (39%), Gaps = 24/284 (8%)

Query: 176 RILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +I+++  S    +     +L ++D D +  +    S D+   +PR+S + +K+A+ +   
Sbjct: 62  KIVYIRNSNNIMTDDKNKNLWLVDVD-SKKQLPLFSDDKQYSQPRWSADGEKIAFVSNLT 120

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSN 292
               ++++   + +R    +   +  + +  +S +GK    + +  D+   I  +  +  
Sbjct: 121 GS-YQIHVHYLKQNR-TALVSQVQGGVSSLTWSPDGKWLAFTQLVADKRTVIAKMPKKPK 178

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             +  +  + +   A Y  D   ++    + G + ++V+ S G   ++I+Q         
Sbjct: 179 GAK-WSKPVVVIDQAYYQADGRGLL----KPGYKHIFVLPSEGGTPRQITQGDFHHKGKL 233

Query: 353 VWSPQGDLIAFTKFSGEKFAI--------GVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            W+ + D I F+      +           VM  DG   +L         P +S +G  L
Sbjct: 234 AWNKKSDAIVFSANRISDWEYKSLEGDLFKVMVNDGELTQLTSTPGKEFNPVFSENGEKL 293

Query: 405 IFSRKKDG---DTGSKLYSIDLNGRNETLINT--PAYASDPQWV 443
            F    +       +KL  +D   R  + I +       DPQW+
Sbjct: 294 AFLSTSNALNPYRNAKLNIMDWKSRKTSEIASDFDRSIQDPQWL 337



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 78/238 (32%), Gaps = 55/238 (23%)

Query: 260 ILAPRFSSNGKRALIS------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
              P+ S +G++ +        +  D+  +++ VD+ S     L +         +S D 
Sbjct: 51  ASDPQISPDGEKIVYIRNSNNIMTDDKNKNLWLVDVDSKKQLPLFSDDKQYSQPRWSADG 110

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------- 365
            +I F S+  G  Q++V     +    +SQ  +       WSP G  +AFT+        
Sbjct: 111 EKIAFVSNLTGSYQIHVHYLKQNRTALVSQV-QGGVSSLTWSPDGKWLAFTQLVADKRTV 169

Query: 366 --------------------------------FSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                                                  I V+  +G   R + +     
Sbjct: 170 IAKMPKKPKGAKWSKPVVVIDQAYYQADGRGLLKPGYKHIFVLPSEGGTPRQITQGDFHH 229

Query: 394 AP--TWSPSGRSLIFSRKKDGDTGSK-----LYSIDL-NGRNETLINTPAYASDPQWV 443
                W+    +++FS  +  D   K     L+ + + +G    L +TP    +P + 
Sbjct: 230 KGKLAWNKKSDAIVFSANRISDWEYKSLEGDLFKVMVNDGELTQLTSTPGKEFNPVFS 287



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 52/158 (32%), Gaps = 21/158 (13%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-------SYFDPVWSPQGDL 360
           S+S  S ++ F         + V  +  +     S   EA          DP  SP G+ 
Sbjct: 3   SFSRFSCRLAFAVSVLATPFITVANTTVASSTGASNLFEAKDIFSLEYASDPQISPDGEK 62

Query: 361 IAFTKFSGEKF------AIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           I + + S           + ++  D   Q  L  +D     P WS  G  + F     G 
Sbjct: 63  IVYIRNSNNIMTDDKNKNLWLVDVDSKKQLPLFSDDKQYSQPRWSADGEKIAFVSNLTGS 122

Query: 414 TGSKLYSIDLNGRNETLINTPA------YASDPQWVGF 445
               ++ +  N R   +           ++ D +W+ F
Sbjct: 123 YQIHVHYLKQN-RTALVSQVQGGVSSLTWSPDGKWLAF 159



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 91/315 (28%), Gaps = 77/315 (24%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS-RILFVSESVV 185
              L DV  +KQ+                   SDD  +  +  +   +  +I FVS    
Sbjct: 80  NLWLVDVDSKKQLP----------------LFSDD--KQYSQPRWSADGEKIAFVSNLTG 121

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------ 239
           S  I      +     N   L       +    +SP+ + +A+     +    +      
Sbjct: 122 SYQIH-----VHYLKQNRTALVSQVQGGVSSLTWSPDGKWLAFTQLVADKRTVIAKMPKK 176

Query: 240 -----------------YLMDTRIDRAP--KRIGNFRSMILAPR--------------FS 266
                            Y  D R    P  K I    S    PR              ++
Sbjct: 177 PKGAKWSKPVVVIDQAYYQADGRGLLKPGYKHIFVLPSEGGTPRQITQGDFHHKGKLAWN 236

Query: 267 SNGKRALISVQK-------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                 + S  +           D++ V +      +LT+T     +  +S +  ++ F 
Sbjct: 237 KKSDAIVFSANRISDWEYKSLEGDLFKVMVNDGELTQLTSTPGKEFNPVFSENGEKLAFL 296

Query: 320 SDRE-----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           S           +L +M         I+ D + S  DP W     L+A T     K  + 
Sbjct: 297 STSNALNPYRNAKLNIMDWKSRKTSEIASDFDRSIQDPQWLS-SSLLAMTYDDFGKRKLA 355

Query: 375 VMKKDGSQERLLVED 389
            +   G + + L + 
Sbjct: 356 TISTKG-KVKDLTDT 369


>gi|319899993|ref|YP_004159721.1| peptidase S41 [Bacteroides helcogenes P 36-108]
 gi|319415024|gb|ADV42135.1| peptidase S41 [Bacteroides helcogenes P 36-108]
          Length = 1083

 Score =  107 bits (267), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 78/220 (35%), Gaps = 34/220 (15%)

Query: 253 IGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +  F S   +P +      S +G     + + D    IY+V +      ++T     + +
Sbjct: 13  LAAFVSAQDSPLWLRNCAISPDGTVVAFTYKGD----IYTVSVTGGRATQITTNAAYDTT 68

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-----------DKEASYFDPVWS 355
             +SPDS  I F SDR G   +Y++   G + +R++            D     F     
Sbjct: 69  PVWSPDSKWIAFASDRLGSMDVYLVSKEGGEPRRLTTHSGSEMPLAFNDTGHILFSADVM 128

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--------FS 407
           P  + I F   +G+   +  +  +G +   L     ++  + +  G  L         + 
Sbjct: 129 PSAEAITFPS-NGQFRQVYQVSVEGGRPE-LFSSMPMECISINKDGEMLYQDKKGYEDYW 186

Query: 408 RKKDGDTGSKLYSIDLNGRN---ETLINTPAYASDPQWVG 444
           RK      ++   +  +G+N     L        +P W  
Sbjct: 187 RKHQVSPIARDVWMYTSGKNPAYRQLTTFGGEDREPVWAP 226



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 53/318 (16%), Positives = 108/318 (33%), Gaps = 44/318 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           +  Y+ +T   G+    +                  N    +  D + ++    ++  + 
Sbjct: 206 NPAYRQLTTFGGEDREPVWAPDGKSFYYLSEENGTSNIYQRVPGDPSGVQITHHTKHPVR 265

Query: 215 FEPRFSPNQQ------KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSS 267
           F    + + +         Y         ++ +           I + +         S 
Sbjct: 266 FL-SIAADGRLCYGFNGEIYTLLPGGKSSKMVVSIISDKSDKDLIRSIKGSGATEMVVSP 324

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +GK     ++ D    +Y   ++   T+++TNT F      ++PD   +V+ S+R G  Q
Sbjct: 325 DGKEIAFVLRGD----VYVTSVEYKTTKQVTNTPFQERDIDFAPDGRSLVYASERGGLWQ 380

Query: 328 LYVMQSNGSDQKRISQ----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           LY       D+K  +           + + + F P +SP G  +AF +      AI V+ 
Sbjct: 381 LYTSSIVRKDEKLFTYATELKEERLTNSDVASFRPRYSPDGKEVAFLENRT---AIRVIN 437

Query: 378 KDGSQERLLVEDS-------NLQAPTWSPSGRSLIFSRKK---DGDTGSKLYSIDLNGRN 427
                 R +++           Q   WSP  + L+         G     +  ++ +G+ 
Sbjct: 438 LKSKVVRTVMDGKYQYSYADGDQWFQWSPDSKWLL--SDYIGIGGWNNKDVVLLNADGKG 495

Query: 428 ETLINTPAYASDPQ--WV 443
           E +  T +  SD    WV
Sbjct: 496 EMVNLTESGYSDGSAKWV 513



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 83/246 (33%), Gaps = 45/246 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   VA+      DI  V +          +I    +    P +S + K    +  
Sbjct: 30  AISPDGTVVAFTY--KGDIYTVSV----TGGRATQITTNAAYDTTPVWSPDSKWIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGK- 325
           +  +MD+Y V  +     RLT      +  +++ D+  I+F +D             G+ 
Sbjct: 84  RLGSMDVYLVSKEGGEPRRLTTHSGSEMPLAFN-DTGHILFSADVMPSAEAITFPSNGQF 142

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-------AIG---V 375
            Q+Y +   G   +  S            +  G+++   K   E +        I     
Sbjct: 143 RQVYQVSVEGGRPELFSSMP---MECISINKDGEMLYQDKKGYEDYWRKHQVSPIARDVW 199

Query: 376 MKKDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           M   G      +L       + P W+P G+S  +  +++G   S +Y        + +  
Sbjct: 200 MYTSGKNPAYRQLTTFGGEDREPVWAPDGKSFYYLSEENGT--SNIY--------QRVPG 249

Query: 433 TPAYAS 438
            P+   
Sbjct: 250 DPSGVQ 255



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 48/338 (14%), Positives = 97/338 (28%), Gaps = 85/338 (25%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    +VV+   K  +  +   G     +T         P +SP+ + +A+A+      +
Sbjct: 31  ISPDGTVVAFTYKGDIYTVSVTGGRATQITT-NAAYDTTPVWSPDSKWIAFASDRLGS-M 88

Query: 238 RVYLMDTRIDRAPKRIGNFRSMIL---------------------APRFSSNGK-RALIS 275
            VYL+ ++    P+R+       +                     A  F SNG+ R +  
Sbjct: 89  DVYLV-SKEGGEPRRLTTHSGSEMPLAFNDTGHILFSADVMPSAEAITFPSNGQFRQVYQ 147

Query: 276 VQKDEAM---------DIYSVDLQSNAT-------------------------------- 294
           V  +            +  S++                                      
Sbjct: 148 VSVEGGRPELFSSMPMECISINKDGEMLYQDKKGYEDYWRKHQVSPIARDVWMYTSGKNP 207

Query: 295 --ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              +LT     +    ++PD     + S+  G   +Y          +I+   +      
Sbjct: 208 AYRQLTTFGGEDREPVWAPDGKSFYYLSEENGTSNIYQRVPGDPSGVQITHHTKHPVRFL 267

Query: 353 VWSPQGDL------IAFTKFSGEKFAIGVM----KKDGSQERLLVEDSNLQAPTWSPSGR 402
             +  G L        +T   G K +  V+     K        ++ S       SP G+
Sbjct: 268 SIAADGRLCYGFNGEIYTLLPGGKSSKMVVSIISDKSDKDLIRSIKGSGATEMVVSPDGK 327

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASD 439
            + F  +        +Y   +  +  + + NTP    D
Sbjct: 328 EIAFVLR------GDVYVTSVEYKTTKQVTNTPFQERD 359



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F PR+SP+ ++VA+        ++ +     R     K   ++       ++
Sbjct: 405 LTNSDVASFRPRYSPDGKEVAFLENRTAIRVINLKSKVVRTVMDGKYQYSYADGDQWFQW 464

Query: 266 SSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K  L            D+  ++         LT + + + SA +      +++ SD
Sbjct: 465 SPDSKWLLSDYIGIGGWNNKDVVLLNADGKGEMVNLTESGYSDGSAKWVLGGKAMIWSSD 524

Query: 322 REG 324
           R G
Sbjct: 525 RAG 527



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 19/69 (27%)

Query: 390 SNLQAPTW------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAY 436
           S   +P W      SP G  + F+ K        +Y++ + G   T I T       P +
Sbjct: 18  SAQDSPLWLRNCAISPDGTVVAFTYK------GDIYTVSVTGGRATQITTNAAYDTTPVW 71

Query: 437 ASDPQWVGF 445
           + D +W+ F
Sbjct: 72  SPDSKWIAF 80


>gi|327543092|gb|EGF29531.1| TolB protein [Rhodopirellula baltica WH47]
          Length = 1169

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 56/282 (19%), Positives = 107/282 (37%), Gaps = 37/282 (13%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILF--EPRFSPNQQKVAYATYDDEDILRVYLM 242
             S   K  L V+  DG ++R L    + +L    P +SP+  ++AY       +    + 
Sbjct: 882  PSSDPKPVLSVVRIDGTDLRDLAEPNETLLHVGSPDWSPDGTQIAYDQQAGSTLTARLMR 941

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTL 301
              +    P  +         P FS +GKR   S  +     +  +D   +    L ++  
Sbjct: 942  VDKTGGDPVDL----GFGSMPTFSPDGKRIAFSAARQG---VGIMDADGSNRTILDSSGW 994

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-----SYFDPVWSP 356
             I     +SP  + + + S       LYV   N S +K + Q  +A      Y++  WSP
Sbjct: 995  GIQ----WSPIPNLLAYSS----GGSLYVWDLNTSSRKAVLQGPDAIRYSYIYWNMCWSP 1046

Query: 357  QGDLIAF--TKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDG 412
             G  IA    +    +  I V+     S+ +++   + L     W+     ++F      
Sbjct: 1047 DGKRIALKGRRRDNSQDEIAVVTLSNPSRLQVIRTPAKLGGDLGWASDSLQILFPMLSAE 1106

Query: 413  DTGSKLYSIDLN--GRNETLINTPAY--------ASDPQWVG 444
               ++L+ +D+   G  +   N P+         ++D +W+ 
Sbjct: 1107 TRRTQLHCVDVTNPGTPKLWPNQPSDRQISGVSLSNDGKWLA 1148



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 50/120 (41%), Gaps = 10/120 (8%)

Query: 336 SDQKRISQDKEASYFDPVW---SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-- 390
              + +S  K        W   + +   +  +  S  K  + V++ DG+  R L E +  
Sbjct: 850 GGIQLVSIAKGRGTTSAKWLNLTLRARELMVSPSSDPKPVLSVVRIDGTDLRDLAEPNET 909

Query: 391 --NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI---NTPAYASDPQWVGF 445
             ++ +P WSP G  + + ++      ++L  +D  G +   +   + P ++ D + + F
Sbjct: 910 LLHVGSPDWSPDGTQIAYDQQAGSTLTARLMRVDKTGGDPVDLGFGSMPTFSPDGKRIAF 969


>gi|301058310|ref|ZP_07199343.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
 gi|300447546|gb|EFK11278.1| tetratricopeptide repeat protein [delta proteobacterium NaphS2]
          Length = 2881

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 89/219 (40%), Gaps = 14/219 (6%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           N           +     S + + +AY    + +  L +    +R    PK+       I
Sbjct: 69  NRPVQISFASDPVLYAAISGDGKTLAYVLEREGKSSLWLSPSGSRTGALPKKRLQDLGRI 128

Query: 261 LAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            AP  S + ++   +   D     + + ++D   +   RLT     + + + SPD  ++ 
Sbjct: 129 SAPSLSQHAEKMAFAATNDDAKGDIYLLTMDTPESTPWRLTGRDSADGAPALSPDGRRVY 188

Query: 318 FESDREGK--EQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDLIAFTKFSGE-K 370
           F+    G+   QL VM+ +    ++ + +    +E ++  P  SP GD +AF  F+ +  
Sbjct: 189 FQRLLPGEALPQLSVMEIDSQTDRQDTPEVKVLREGAF--PAVSPGGDRLAFVSFAEDPG 246

Query: 371 FAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSR 408
             I V+     + + +    +    P WS  G+S+ FSR
Sbjct: 247 GDIHVLDLKTGKAKAVTTGPAQDLYPAWSRDGKSVYFSR 285



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 80/209 (38%), Gaps = 15/209 (7%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---TERLTNTLFIN 304
             P +I      +L    S +GK     ++++    ++     S      ++    L   
Sbjct: 69  NRPVQISFASDPVLYAAISGDGKTLAYVLEREGKSSLWLSPSGSRTGALPKKRLQDLGRI 128

Query: 305 ISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            + S S  + ++ F +   D +G   L  M +  S   R++  ++++   P  SP G  +
Sbjct: 129 SAPSLSQHAEKMAFAATNDDAKGDIYLLTMDTPESTPWRLT-GRDSADGAPALSPDGRRV 187

Query: 362 AFTKFSGEKF--AIGVMKKDGSQERLLVEDSNL----QAPTWSPSGRSLIFSRKKDGDTG 415
            F +    +    + VM+ D   +R    +  +      P  SP G  L F    + D G
Sbjct: 188 YFQRLLPGEALPQLSVMEIDSQTDRQDTPEVKVLREGAFPAVSPGGDRLAFVSFAE-DPG 246

Query: 416 SKLYSIDL-NGRNETLINTPAYASDPQWV 443
             ++ +DL  G+ + +   PA    P W 
Sbjct: 247 GDIHVLDLKTGKAKAVTTGPAQDLYPAWS 275



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 76/231 (32%), Gaps = 21/231 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE---D 235
           ++ +  +   K  + ++  D   +  +    RD     P  SP+ ++V +          
Sbjct: 140 MAFAATNDDAKGDIYLLTMDTPESTPWRLTGRDSADGAPALSPDGRRVYFQRLLPGEALP 199

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNAT 294
            L V  +D++ DR              P  S  G R    S  +D   DI+ +DL++   
Sbjct: 200 QLSVMEIDSQTDRQDTPEVKVLREGAFPAVSPGGDRLAFVSFAEDPGGDIHVLDLKTGKA 259

Query: 295 ERLTNTLFINISASYSPDSSQIVFES-----------DREGKEQLYVMQSN--GSDQKRI 341
           + +T     ++  ++S D   + F             D   K  +  +     G     +
Sbjct: 260 KAVTTGPAQDLYPAWSRDGKSVYFSRIDADTNKDGAIDFGDKAVICRINPESPGGWAYPL 319

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           + +  ++Y  P+ +P    I F         I  +   G           +
Sbjct: 320 TSEAFSAY-QPMTTP--SQILFLSTLNGIGNIWALPLTGQIPTKENASGQM 367


>gi|300785363|ref|YP_003765654.1| beta-lactamase/prolyl oligopeptidase [Amycolatopsis mediterranei
           U32]
 gi|299794877|gb|ADJ45252.1| beta-lactamase/prolyl oligopeptidase [Amycolatopsis mediterranei
           U32]
          Length = 1107

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 55/338 (16%), Positives = 110/338 (32%), Gaps = 67/338 (19%)

Query: 160 DDIYQSITGEKGDFNS---RILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQIL 214
           DD+Y     E    +    RI +V  +      +   SL V+  DG   R LT       
Sbjct: 8   DDLYAIEFPEHPAVSPDGRRIAYVLRTADRDRDEDTRSLWVVPADGGEARRLTRG--PAD 65

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            EP +SP+  ++A+     +D      +       P+++         P +  +G     
Sbjct: 66  LEPAWSPDGTRLAF--LRAQDGPAQLWLLPTGGGEPEQVTTLPLGAGTPVWRPDGAEIAF 123

Query: 275 S-------------------------------------VQKDEAMDIYSVDLQSNATERL 297
           +                                     + +     ++ +D+ +    ++
Sbjct: 124 AAPVDLAADEGDDDAARTRRASAPVVADRLDFKADGAGLLRTLRKHVHVLDVATGEVRQV 183

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQL-------YVMQSNGSDQKRISQDKEASYF 350
           T+  +     ++SPD +++ F +  E    L        V   + + + R+         
Sbjct: 184 TSGDWHAGDPAWSPDGARLAFPAGPEADTDLTFRSGAYVVEPGDRASEPRLIGSGAGMCG 243

Query: 351 DPVWSPQG-DLIAFTKFSGEKFAIGV--MKKDGSQERLLVE-------DSNLQAPTWSP- 399
              W+  G  L+A  +       +G+  +  DG +   L               P   P 
Sbjct: 244 AVTWTTDGAALLAVGRRDTAPGHLGLLRIPLDGGETTDLAAPLDRNVMPGGAGYPGALPQ 303

Query: 400 -SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            SG +++F  +  G T  +LY++D  G    L+   A 
Sbjct: 304 LSGATVLFCARDRGYT--QLYAVDAEGGEPRLVAGGAG 339



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 66/181 (36%), Gaps = 45/181 (24%)

Query: 307 ASYSPDSSQIVF---ESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            + SPD  +I +    +DR+       L+V+ ++G + +R+++    +  +P WSP G  
Sbjct: 19  PAVSPDGRRIAYVLRTADRDRDEDTRSLWVVPADGGEARRLTRGP--ADLEPAWSPDGTR 76

Query: 361 IAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSR----------- 408
           +AF +       + ++   G + E++         P W P G  + F+            
Sbjct: 77  LAFLRAQDGPAQLWLLPTGGGEPEQVTTLPLGAGTPVWRPDGAEIAFAAPVDLAADEGDD 136

Query: 409 -------------------KKDG-----DTGSKLYSIDL-NGRNETLINTPAYASDPQWV 443
                              K DG          ++ +D+  G    + +   +A DP W 
Sbjct: 137 DAARTRRASAPVVADRLDFKADGAGLLRTLRKHVHVLDVATGEVRQVTSGDWHAGDPAWS 196

Query: 444 G 444
            
Sbjct: 197 P 197



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 97/277 (35%), Gaps = 30/277 (10%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY------L 241
            ++  + V+D     +R +T S D    +P +SP+  ++A+    + D    +      +
Sbjct: 165 TLRKHVHVLDVATGEVRQVT-SGDWHAGDPAWSPDGARLAFPAGPEADTDLTFRSGAYVV 223

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERLT 298
                   P+ IG+   M  A  ++++G   L   ++D     + +  + L    T  L 
Sbjct: 224 EPGDRASEPRLIGSGAGMCGAVTWTTDGAALLAVGRRDTAPGHLGLLRIPLDGGETTDLA 283

Query: 299 NTLFINISA--SYSP------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             L  N+    +  P        + ++F +   G  QLY + + G + + ++     +  
Sbjct: 284 APLDRNVMPGGAGYPGALPQLSGATVLFCARDRGYTQLYAVDAEGGEPRLVAGGAGTAVT 343

Query: 351 DPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQE-RLLVEDSNLQAPTWS-------PSG 401
               +  G+  A    +   +  I  +   G          S    P  S         G
Sbjct: 344 GMAVA--GETAAIVLATPTSYGQIATVPVGGGAVDVRTAHGSGELEPVVSEEREFTISDG 401

Query: 402 RSLI-FSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             +  +  +    TG +   +D++G      N  A A
Sbjct: 402 TVVAGWLLRDPARTGPRPLLLDIHGGPHNAWNGTADA 438



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 6/57 (10%)

Query: 393 QAPTWSPSGRSLIFS-----RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           + P  SP GR + +      R +D DT S L+ +  +G     +       +P W  
Sbjct: 17  EHPAVSPDGRRIAYVLRTADRDRDEDTRS-LWVVPADGGEARRLTRGPADLEPAWSP 72


>gi|119486195|ref|ZP_01620255.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
 gi|119456686|gb|EAW37815.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
          Length = 1368

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 83/235 (35%), Gaps = 19/235 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    FSP+ + +A A+ D+     V L D    +  K +    + +    F
Sbjct: 746 TLGGHVNWVRAVSFSPDGKLLATASGDN----TVKLWDASTGKEIKTLTGHTNSVNGVSF 801

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREG 324
           S +GK    +   D  + ++  D  +    + LT         S+SPD   +   S   G
Sbjct: 802 SPDGKLLA-TASGDNTVKLW--DASTGKEIKTLTGHTNWVNGVSFSPDGKLLATAS---G 855

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE- 383
              + +   +     ++  +   S     +SP G L+A T        + +      +E 
Sbjct: 856 DNTVKLWDLSTGKVIKMLTEHTNSVNGVSFSPDGKLLATTSGDNT---VKLWDASTGKEI 912

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             L    +++   ++SP G+ L  +    GD   KL+        +TL     + 
Sbjct: 913 KTLTGHTNSVNGVSFSPDGKLLATAS---GDNTVKLWDASTGKEIKTLTGHTNWV 964



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 54/320 (16%), Positives = 106/320 (33%), Gaps = 46/320 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+++        V  +LWD    K+I                        +++TG     
Sbjct: 931  GKLLATASGDNTV--KLWDASTGKEI------------------------KTLTGHTNWV 964

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            N         + +    N++ + D                +    FSP+ + +A A+ D+
Sbjct: 965  NGVSFSPDGKLATASADNTVKLWDASTGKEIKTLTGHTNSVIGVSFSPDGKLLATASGDN 1024

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L D    +  K +    + +    FS +GK    +   D  + ++  D  +  
Sbjct: 1025 ----TVKLWDASTGKEIKTLTGHTNWVNGVSFSPDGKLLA-TGSGDNTVKLW--DASTGK 1077

Query: 294  TER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              + LT         S+SPD       +D      + +  ++   + +       S    
Sbjct: 1078 EIKTLTGHTNSVNGVSFSPDGKLATASAD----NTVKLWDASTGKEIKTLTGHTNSVIGV 1133

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKK 410
             +SP G L+A T        + +      +E   L    +++   ++SP G+ L  +   
Sbjct: 1134 SFSPDGKLLATTSGDNT---VKLWDASTGKEIKTLTGHTNSVNGVSFSPDGKLLATAS-- 1188

Query: 411  DGDTGSKLYSIDLNGRNETL 430
             GD   KL+        +TL
Sbjct: 1189 -GDKTVKLWDASTGKEIKTL 1207



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 104/327 (31%), Gaps = 45/327 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+++        V  +LWD    K+I  K       S           +        G  
Sbjct: 763  GKLLATASGDNTV--KLWDASTGKEI--KTLTGHTNS-----------VNGVSFSPDG-- 805

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    + + +    N++ + D                +    FSP+ + +A A+ D+
Sbjct: 806  --------KLLATASGDNTVKLWDASTGKEIKTLTGHTNWVNGVSFSPDGKLLATASGDN 857

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L D    +  K +    + +    FS +GK    +   D  + ++  D  +  
Sbjct: 858  ----TVKLWDLSTGKVIKMLTEHTNSVNGVSFSPDGKLLA-TTSGDNTVKLW--DASTGK 910

Query: 294  TER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              + LT         S+SPD   +   S   G   + +  ++   + +            
Sbjct: 911  EIKTLTGHTNSVNGVSFSPDGKLLATAS---GDNTVKLWDASTGKEIKTLTGHTNWVNGV 967

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKK 410
             +SP G  +A          + +      +E   L    +++   ++SP G+ L  +   
Sbjct: 968  SFSPDGK-LATASADNT---VKLWDASTGKEIKTLTGHTNSVIGVSFSPDGKLLATAS-- 1021

Query: 411  DGDTGSKLYSIDLNGRNETLINTPAYA 437
             GD   KL+        +TL     + 
Sbjct: 1022 -GDNTVKLWDASTGKEIKTLTGHTNWV 1047



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 87/250 (34%), Gaps = 21/250 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +    N++ + D                +    FSP+  K+A A+ D+     V L D  
Sbjct: 936  TASGDNTVKLWDASTGKEIKTLTGHTNWVNGVSFSPDG-KLATASADN----TVKLWDAS 990

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
              +  K +    + ++   FS +GK    +   D  + ++  D  +    + LT      
Sbjct: 991  TGKEIKTLTGHTNSVIGVSFSPDGKLLA-TASGDNTVKLW--DASTGKEIKTLTGHTNWV 1047

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               S+SPD   +   S   G   + +  ++   + +       S     +SP G  +A  
Sbjct: 1048 NGVSFSPDGKLLATGS---GDNTVKLWDASTGKEIKTLTGHTNSVNGVSFSPDGK-LATA 1103

Query: 365  KFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    + +      +E   L    +++   ++SP G+ L  +    GD   KL+   
Sbjct: 1104 SADNT---VKLWDASTGKEIKTLTGHTNSVIGVSFSPDGKLLATTS---GDNTVKLWDAS 1157

Query: 423  LNGRNETLIN 432
                 +TL  
Sbjct: 1158 TGKEIKTLTG 1167



 Score = 96.6 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 55/352 (15%), Positives = 114/352 (32%), Gaps = 53/352 (15%)

Query: 104  NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            + +G      G+++        V  +LWD    K+I                HT  + + 
Sbjct: 1004 SVIGVSFSPDGKLLATASGDNTV--KLWDASTGKEIKTLT-----------GHT--NWVN 1048

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                   G          + + +G   N++ + D                +    FSP+ 
Sbjct: 1049 GVSFSPDG----------KLLATGSGDNTVKLWDASTGKEIKTLTGHTNSVNGVSFSPDG 1098

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             K+A A+ D+     V L D    +  K +    + ++   FS +GK    +   D  + 
Sbjct: 1099 -KLATASADN----TVKLWDASTGKEIKTLTGHTNSVIGVSFSPDGKLLA-TTSGDNTVK 1152

Query: 284  IYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++  D  +    + LT         S+SPD   +   S   G + + +  ++   + +  
Sbjct: 1153 LW--DASTGKEIKTLTGHTNSVNGVSFSPDGKLLATAS---GDKTVKLWDASTGKEIKTL 1207

Query: 343  QDKEASYFDPVWSPQ--------GDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNL 392
                       +SP         G  +A          + +      +E   L    +++
Sbjct: 1208 SGHTHWVNGVSFSPVGASLPSGIGKTLATASGDNT---VKLWDASTGKEIKTLTGHTNSV 1264

Query: 393  QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               ++SP G++L  +    GD   KL++       +TL     +     +  
Sbjct: 1265 NGVSFSPDGKTLATAS---GDNTVKLWNASTGKEIKTLTGHTHWVRAVSFSP 1313



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/322 (15%), Positives = 102/322 (31%), Gaps = 54/322 (16%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+++  G     V  +LWD    K+I                        +++TG     
Sbjct: 1056 GKLLATGSGDNTV--KLWDASTGKEI------------------------KTLTGHTNSV 1089

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            N         + +    N++ + D                +    FSP+ + +A  + D+
Sbjct: 1090 NGVSFSPDGKLATASADNTVKLWDASTGKEIKTLTGHTNSVIGVSFSPDGKLLATTSGDN 1149

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L D    +  K +    + +    FS +GK    +   D+ + ++  D  +  
Sbjct: 1150 ----TVKLWDASTGKEIKTLTGHTNSVNGVSFSPDGKLLA-TASGDKTVKLW--DASTGK 1202

Query: 294  TER-LTNTLFINISASYSP--------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
              + L+         S+SP            +   S   G   + +  ++   + +    
Sbjct: 1203 EIKTLSGHTHWVNGVSFSPVGASLPSGIGKTLATAS---GDNTVKLWDASTGKEIKTLTG 1259

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGR 402
               S     +SP G  +A          + +      +E   L      ++A ++SP G+
Sbjct: 1260 HTNSVNGVSFSPDGKTLATASGDNT---VKLWNASTGKEIKTLTGHTHWVRAVSFSPDGK 1316

Query: 403  SLIFSRKKDGDTGSKLYSIDLN 424
                      D   KL+ +D +
Sbjct: 1317 ----LATASEDNTVKLWQLDFD 1334



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 15/186 (8%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISAS 308
           P  +G   + + A  FS +GK    +   D  + ++  D  +    + LT         S
Sbjct: 744 PNTLGGHVNWVRAVSFSPDGKLLA-TASGDNTVKLW--DASTGKEIKTLTGHTNSVNGVS 800

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +   S   G   + +  ++   + +             +SP G L+A      
Sbjct: 801 FSPDGKLLATAS---GDNTVKLWDASTGKEIKTLTGHTNWVNGVSFSPDGKLLATASGDN 857

Query: 369 EKFAIGVMKKDGSQE-RLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               + +      +  ++L E +N +   ++SP G+ L  +    GD   KL+       
Sbjct: 858 T---VKLWDLSTGKVIKMLTEHTNSVNGVSFSPDGKLLATTS---GDNTVKLWDASTGKE 911

Query: 427 NETLIN 432
            +TL  
Sbjct: 912 IKTLTG 917


>gi|91216669|ref|ZP_01253634.1| putative exported tricorn protease [Psychroflexus torquis ATCC
           700755]
 gi|91185138|gb|EAS71516.1| putative exported tricorn protease [Psychroflexus torquis ATCC
           700755]
          Length = 1052

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 77/204 (37%), Gaps = 25/204 (12%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +  R    PKR+   + +   P FS +G +     + D  +D++ V       +RLT  
Sbjct: 20  WVANRDGSNPKRLTIDKGIEANPVFSPDGSKIAFEAEYDGNVDVFIVSANGGVPKRLTWH 79

Query: 301 LFINISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            + +    +S DS  ++F S R        Q++ + ++G     I+Q    + F   +S 
Sbjct: 80  PYNDYVRDFSADSKTVLFVSQRNSFTNRYMQVFSVSTDGGA---ITQLDIPNAFWASYSD 136

Query: 357 QGDLIAFT-----------KFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGR 402
               IA+T              G    I +        S+ +     SN   P W   G 
Sbjct: 137 NDQSIAYTPIADRFNQWKHYRGGTVARIWLYNTQSHKVSEIQKPEGGSNDSQPQW--MGE 194

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR 426
            + F   +DG+    LYS + N +
Sbjct: 195 FVYFKSDRDGEF--NLYSYETNSK 216



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 81/213 (38%), Gaps = 23/213 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +RDG+N + LT  +  I   P FSP+  K+A+    D ++     + +     PK
Sbjct: 18  DLWVANRDGSNPKRLTIDK-GIEANPVFSPDGSKIAFEAEYDGNVD--VFIVSANGGVPK 74

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY----SVDLQSNATERLTNTLFINISA 307
           R+           FS++ K  L   Q++   + Y    SV     A  +L   +     A
Sbjct: 75  RLTWHPYNDYVRDFSADSKTVLFVSQRNSFTNRYMQVFSVSTDGGAITQL--DIPNAFWA 132

Query: 308 SYSPDSSQIVFE--SDR---------EGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWS 355
           SYS +   I +   +DR             ++++  +       I   +  ++   P W 
Sbjct: 133 SYSDNDQSIAYTPIADRFNQWKHYRGGTVARIWLYNTQSHKVSEIQKPEGGSNDSQPQWM 192

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             G+ + F      +F +   + +    + L +
Sbjct: 193 --GEFVYFKSDRDGEFNLYSYETNSKAIKKLTD 223



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 81/228 (35%), Gaps = 19/228 (8%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                Y T  + D +    + T +    +R  +    + +   S +G RA++    D   
Sbjct: 245 GTLHIYNTKTNTDNVLNISITTDLLELRERFVSGEDYVRSVGVSPSGARAVV----DFRG 300

Query: 283 DIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           DI +V  Q    + +T T         +SPD   I + SD  G+  L++  +   D   I
Sbjct: 301 DIVTVPGQKGDPKNMTATTGTHEKYPEWSPDGKFIAYFSDATGEYALHIKNNVLGDVSAI 360

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-------SNLQA 394
                  Y D  WSP    +++         + V      +   + ED            
Sbjct: 361 PLTGSGFYADIHWSPDSKNVSYV---DNGRRLYVTDISTKKTTKIDEDILFVPGIFRELF 417

Query: 395 PTWSPSGRSLIFS--RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            +WS     + ++   + + +     YSI  + ++  L +  +  S+P
Sbjct: 418 GSWSHDSNWIAYTVITETNFERAYA-YSISED-KSYPLSDGLSNVSEP 463



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 55/316 (17%), Positives = 104/316 (32%), Gaps = 38/316 (12%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R   H  +D +       K      +LFVS+          +  +  DG  I  L     
Sbjct: 75  RLTWHPYNDYVRDFSADSK-----TVLFVSQRNSFTNRYMQVFSVSTDGGAITQLDIPN- 128

Query: 212 QILFEPRFSPNQQKVAYA----------TYDDEDILRVYLMDTRIDRAPK-RIGNFRSMI 260
              F   +S N Q +AY            Y    + R++L +T+  +  + +     S  
Sbjct: 129 --AFWASYSDNDQSIAYTPIADRFNQWKHYRGGTVARIWLYNTQSHKVSEIQKPEGGSND 186

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
             P++   G+       +D   ++YS +  S A ++LT+          +  +       
Sbjct: 187 SQPQWM--GEFVYFKSDRDGEFNLYSYETNSKAIKKLTDYK---DFPVINLKAHNGAVIY 241

Query: 321 DREGKEQLYVMQSNGSDQKRIS------------QDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++ G   +Y  ++N  +   IS               E        SP G   A   F G
Sbjct: 242 EQAGTLHIYNTKTNTDNVLNISITTDLLELRERFVSGEDYVRSVGVSPSGAR-AVVDFRG 300

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +   +   K D          ++ + P WSP G+ + +     G+    + +  L   + 
Sbjct: 301 DIVTVPGQKGDPKNMTATT-GTHEKYPEWSPDGKFIAYFSDATGEYALHIKNNVLGDVSA 359

Query: 429 TLINTPAYASDPQWVG 444
             +    + +D  W  
Sbjct: 360 IPLTGSGFYADIHWSP 375



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 75/217 (34%), Gaps = 12/217 (5%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           ++ +     +    S  +  S +      +  +  +     + + +T +       P +S
Sbjct: 270 ELRERFVSGEDYVRSVGVSPSGARAVVDFRGDIVTVPGQKGDPKNMTATTGTHEKYPEWS 329

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + +AY + D      +++ +  +                  +S + K        D 
Sbjct: 330 PDGKFIAYFS-DATGEYALHIKNNVLGDVSAIPLTGSGFYADIHWSPDSKNVSYV---DN 385

Query: 281 AMDIYSVDLQSNATERL------TNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQS 333
              +Y  D+ +  T ++         +F  +  S+S DS+ I +    E   E+ Y    
Sbjct: 386 GRRLYVTDISTKKTTKIDEDILFVPGIFRELFGSWSHDSNWIAYTVITETNFERAYAYSI 445

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +      +S D  ++  +PV+ P G  +  T  +   
Sbjct: 446 SEDKSYPLS-DGLSNVSEPVFDPSGKYLYMTASTDAG 481



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 2/88 (2%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S +   +AY    + +  R Y      D++   + +  S +  P F  +GK   ++  
Sbjct: 419 SWSHDSNWIAYTVITETNFERAYAYSISEDKSY-PLSDGLSNVSEPVFDPSGKYLYMTAS 477

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI 305
            D    +   D QSN  + LT ++++  
Sbjct: 478 TDAGPLVNWFD-QSNIDKELTQSIYLVT 504



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 16/141 (11%), Positives = 46/141 (32%), Gaps = 4/141 (2%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISV 276
           +SP+ + V+Y       +    +   +  +  + I     +   L   +S +      +V
Sbjct: 373 WSPDSKNVSYVDNG-RRLYVTDISTKKTTKIDEDILFVPGIFRELFGSWSHDSNWIAYTV 431

Query: 277 QKDEAMD-IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +   +  Y+  +  + +  L++ L       + P    +   +  +    +     + 
Sbjct: 432 ITETNFERAYAYSISEDKSYPLSDGLSNVSEPVFDPSGKYLYMTASTDAGPLVNWFDQSN 491

Query: 336 SDQKRISQDKEASYFDPVWSP 356
            D++        +    V SP
Sbjct: 492 IDKELTQSIYLVTLQKEVISP 512


>gi|332711762|ref|ZP_08431693.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332349740|gb|EGJ29349.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1142

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 65/363 (17%), Positives = 139/363 (38%), Gaps = 42/363 (11%)

Query: 88   KQKITNPDSIPRFQDWNSLGAQ-VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS 146
             Q++         + W++ G Q  L+TG   +       + F L    D +++      +
Sbjct: 711  GQRLATGSDDKTARIWDNQGNQIALLTGHQFRVNS----IAFSL----DGQRLATGSRDN 762

Query: 147  SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIR 204
            +   W    + I+      +      + + + F  +  ++ +     ++ + D  G  + 
Sbjct: 763  TARIWDNQGNQIA------VLKGHQFWVNSVAFSPDGKTLATASFNKTVIIWDLQGHELT 816

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             +T  +D++     FSP+ Q++A A+ D     R++            +   +S + +  
Sbjct: 817  VVTAHQDKVNSV-AFSPDGQRLATASSD--KTARIWDNQ---GNQIAVLTGHQSRVWSVA 870

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS +G+R   +  +D    I+  D Q N    LT       S ++SPD   +   SD   
Sbjct: 871  FSPDGQRLA-TASRDNTARIW--DNQGNQIAVLTGPQNSLNSVAFSPDGKTLATASD--- 924

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             +    +  N  +Q  +    +       +SP G  +A     G      +    G+Q  
Sbjct: 925  -DNTATIWDNQGNQLAVLTGHQNWLTSVAFSPDGQRLATASVDGTA---RIWDNQGNQIA 980

Query: 385  LLV-EDSNLQAPTWSPSGRSLIFSRKKD-----GDTGSKLYSIDLNGRNETLINTPAYAS 438
            +L    S + +  +SP G+ L  +   +      + G+++    L G  + L++  A++ 
Sbjct: 981  VLKGHQSRVNSVAFSPDGQRLATASVDNTARIWDNQGNQIAL--LTGHQKRLLS-AAFSP 1037

Query: 439  DPQ 441
            D Q
Sbjct: 1038 DGQ 1040



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 95/240 (39%), Gaps = 20/240 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + +     +  + D  G N   +       ++   FSP+ QK+A A+ D     R++ 
Sbjct: 548 QRLATASDDKTARIWDNQG-NQIAVITGHQDSVWSIAFSPDGQKLATASRD--KTARIWD 604

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                      +   + ++ +  FS +G+R   +   D+   I+  DLQ N    LT   
Sbjct: 605 NQ---GHEISVLRGHQDVVWSVAFSPDGQRLA-TASDDKTARIW--DLQGNQIALLTGHQ 658

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++SPD  ++   SD +   +++    N  +Q  +    + S +   +SP G  +
Sbjct: 659 SRVNSVAFSPDGQKLATVSD-DKTARIW---DNQGNQIAVLTGHQDSVWSVAFSPDGQRL 714

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           A T    +   I      G+Q  LL      + +  +S  G+ L    +   D  ++++ 
Sbjct: 715 A-TGSDDKTARIW--DNQGNQIALLTGHQFRVNSIAFSLDGQRLATGSR---DNTARIWD 768



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 86/229 (37%), Gaps = 21/229 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++   FSP+ Q++A A+ D     R++            I   +  + +  F
Sbjct: 530 VLTGHQDSVWSVAFSPDGQRLATASDD--KTARIWDNQ---GNQIAVITGHQDSVWSIAF 584

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G++   +  +D+   I+  D Q +    L     +  S ++SPD  ++   SD    
Sbjct: 585 SPDGQKLA-TASRDKTARIW--DNQGHEISVLRGHQDVVWSVAFSPDGQRLATASD---D 638

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +   +    G+    ++   ++      +SP G  +A            +    G+Q  +
Sbjct: 639 KTARIWDLQGNQIALLT-GHQSRVNSVAFSPDGQKLATVSDDKTA---RIWDNQGNQIAV 694

Query: 386 LV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           L     ++ +  +SP G+ L        D  ++++  D  G    L+  
Sbjct: 695 LTGHQDSVWSVAFSPDGQRLATGSD---DKTARIW--DNQGNQIALLTG 738



 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 104/297 (35%), Gaps = 24/297 (8%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            D +++       +   W    + I+             F+       + + +    N+  
Sbjct: 833  DGQRLATASSDKTARIWDNQGNQIAVLTGHQSRVWSVAFSPD----GQRLATASRDNTAR 888

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + D  G N   +       L    FSP+ + +A A+ D+       + D + ++    + 
Sbjct: 889  IWDNQG-NQIAVLTGPQNSLNSVAFSPDGKTLATASDDN----TATIWDNQGNQLA-VLT 942

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              ++ + +  FS +G+R   +   D    I+  D Q N    L        S ++SPD  
Sbjct: 943  GHQNWLTSVAFSPDGQRLA-TASVDGTARIW--DNQGNQIAVLKGHQSRVNSVAFSPDGQ 999

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            ++   +  +   +++    N  +Q  +    +       +SP G  +A   F        
Sbjct: 1000 RLA-TASVDNTARIW---DNQGNQIALLTGHQKRLLSAAFSPDGQKLATGSFDNTA---R 1052

Query: 375  VMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +    G+   +L    +   +  +SP G+ L  +     D  ++++ ++  G     
Sbjct: 1053 IWDNQGNPLAVLTGHQDWVSSVAFSPDGQRLATASD---DKTARIWKVESLGELLRR 1106



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 75/215 (34%), Gaps = 19/215 (8%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            Y     +          R    +   +  + +  FS +G+R   +   D+   I+  D 
Sbjct: 508 HYPATSPIYALQQSISKFRKGAVLTGHQDSVWSVAFSPDGQRLA-TASDDKTARIW--DN 564

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           Q N    +T       S ++SPD  ++   + R+   +++    N   +  + +  +   
Sbjct: 565 QGNQIAVITGHQDSVWSIAFSPDGQKLA-TASRDKTARIW---DNQGHEISVLRGHQDVV 620

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
           +   +SP G  +A            +    G+Q  LL    S + +  +SP G+ L    
Sbjct: 621 WSVAFSPDGQRLATASDDKTA---RIWDLQGNQIALLTGHQSRVNSVAFSPDGQKLATVS 677

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
               D  ++++  D  G    ++       D  W 
Sbjct: 678 D---DKTARIW--DNQGNQIAVLT---GHQDSVWS 704



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 107/294 (36%), Gaps = 46/294 (15%)

Query: 80   NLISQDSFKQKITNPDSIPRFQDWNSLGAQ-VLVTG------RVIKEGKDRLRVEF---- 128
            N ++     Q++    S    + W++ G Q  ++TG       V      +         
Sbjct: 826  NSVAFSPDGQRLATASSDKTARIWDNQGNQIAVLTGHQSRVWSVAFSPDGQRLATASRDN 885

Query: 129  --RLWDVKDRKQIIGKKFFSSPASWRKIAH--------TISDDIYQSITGEKGD------ 172
              R+WD     QI          S   +A         T SDD   +I   +G+      
Sbjct: 886  TARIWD-NQGNQIA--VLTGPQNSLNSVAFSPDGKTLATASDDNTATIWDNQGNQLAVLT 942

Query: 173  ----FNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                + + + F    + + +  +  +  + D  G N   +       +    FSP+ Q++
Sbjct: 943  GHQNWLTSVAFSPDGQRLATASVDGTARIWDNQG-NQIAVLKGHQSRVNSVAFSPDGQRL 1001

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            A A+ D  +  R++            +   +  +L+  FS +G++   +   D    I+ 
Sbjct: 1002 ATASVD--NTARIWDNQ---GNQIALLTGHQKRLLSAAFSPDGQKLA-TGSFDNTARIW- 1054

Query: 287  VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D Q N    LT       S ++SPD  ++   SD +   +++ ++S G   +R
Sbjct: 1055 -DNQGNPLAVLTGHQDWVSSVAFSPDGQRLATASD-DKTARIWKVESLGELLRR 1106


>gi|311746912|ref|ZP_07720697.1| MdsD protein [Algoriphagus sp. PR1]
 gi|126578602|gb|EAZ82766.1| MdsD protein [Algoriphagus sp. PR1]
          Length = 1077

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 62/336 (18%), Positives = 129/336 (38%), Gaps = 40/336 (11%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  L+D ++    +   ++    +          +IY  ++   G FN        ++  
Sbjct: 201 DIWLYDAEEGSHSMLTDYYGEDRNPVFSPDE--SEIY-YLSEANGSFN------VFAMPL 251

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              K SL +       +R+LT S+D ++    F  + +       +    L V +    +
Sbjct: 252 NNPKQSLALTSLTDFPVRFLTISQDGLM---SFGYDGELYTLRKGESPKKLEVRIKTQAV 308

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             +   I      +     S NGK   +  +     +++   +  + T+R+TNT      
Sbjct: 309 SNSDSYIA-INGGVREMVISPNGKEIALIARG----EVFVTSVDGSMTKRITNTPEQERF 363

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSD----------QKRISQDKEASYFDPVWSP 356
             +SPD   +V+ S+R+GK  +Y      S+          ++++   KE   ++P +SP
Sbjct: 364 LDFSPDGKSLVYSSERDGKWSIYSSSKIRSEEPYFFASTLIEEKVLVSKEVDVYEPDYSP 423

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-------SNLQAPTWSPSGRSLIFSRK 409
            G  +A+ +   ++  + VM  +  +   L+            Q  TWSP  + L+ +  
Sbjct: 424 DGKKLAYVE---DRRTLKVMDLESQESVTLMTPDELFHMRDGDQYFTWSPDSKWLL-ATY 479

Query: 410 KDGDTGSKLYSIDLNGR--NETLINTPAYASDPQWV 443
                 S++  +D  G+   + L  +    S P WV
Sbjct: 480 NPTMVNSEVVLLDATGKEPKKNLTKSGYGDSQPVWV 515



 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 35/250 (14%), Positives = 82/250 (32%), Gaps = 35/250 (14%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            S  + +  P  SP+   +A+    D        + +      K++    +    P +S 
Sbjct: 23  QSPPKWMRYPAISPDGSLIAFTFKGD------LFLVSSTGGDAKQLTFHEAHDYKPVWSK 76

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----- 322
           +G++   +  +    D++ +  Q     RLT          +S D+  ++F + R     
Sbjct: 77  DGEQLAFASDRYGNFDVFIMSAQGGPATRLTFHSNDEQPFDFSADNQNVIFGATRMDIAE 136

Query: 323 ------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------ 370
                   + +LY +        +I             S  G  + +    G +      
Sbjct: 137 HRQYPTGSQPELYQVPKKSGRVDQIWTIPAEYVQT---SQDGTKMIYHDKKGGENEWRKH 193

Query: 371 ------FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I +   +     +L +     + P +SP    + +  + +G     ++++ L
Sbjct: 194 HESGIARDIWLYDAEEGSHSMLTDYYGEDRNPVFSPDESEIYYLSEANGSF--NVFAMPL 251

Query: 424 NGRNETLINT 433
           N   ++L  T
Sbjct: 252 NNPKQSLALT 261



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 68/205 (33%), Gaps = 30/205 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G     + + D    ++ V       ++LT     +    +S D  Q+ F SDR
Sbjct: 32  PAISPDGSLIAFTFKGD----LFLVSSTGGDAKQLTFHEAHDYKPVWSKDGEQLAFASDR 87

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----------GEKF 371
            G   +++M + G    R++           +S     + F               G + 
Sbjct: 88  YGNFDVFIMSAQGGPATRLTFHSN-DEQPFDFSADNQNVIFGATRMDIAEHRQYPTGSQP 146

Query: 372 AIG-VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT----------GSKLYS 420
            +  V KK G  +++    +       S  G  +I+  KK G+              ++ 
Sbjct: 147 ELYQVPKKSGRVDQIWTIPAEYVQT--SQDGTKMIYHDKKGGENEWRKHHESGIARDIWL 204

Query: 421 IDL-NGRNETLINTPAYASDPQWVG 444
            D   G +  L +      +P +  
Sbjct: 205 YDAEEGSHSMLTDYYGEDRNPVFSP 229



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 72/213 (33%), Gaps = 28/213 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SPN +++A     +        + +      KRI N         FS +GK  + S ++
Sbjct: 326 ISPNGKEIALIARGE------VFVTSVDGSMTKRITNTPEQERFLDFSPDGKSLVYSSER 379

Query: 279 DEAMDIYSVD----------LQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQ 327
           D    IYS              +   E++  +  +++    YSPD  ++ +  DR     
Sbjct: 380 DGKWSIYSSSKIRSEEPYFFASTLIEEKVLVSKEVDVYEPDYSPDGKKLAYVEDR---RT 436

Query: 328 LYVMQSNGSDQKRISQDKE-----ASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGS 381
           L VM     +   +    E            WSP    +  T         + ++   G 
Sbjct: 437 LKVMDLESQESVTLMTPDELFHMRDGDQYFTWSPDSKWLLATYNPTMVNSEVVLLDATGK 496

Query: 382 QER--LLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           + +  L         P W   G+ +++   +DG
Sbjct: 497 EPKKNLTKSGYGDSQPVWVNEGKQMLWFSNRDG 529



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 91/242 (37%), Gaps = 36/242 (14%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  L ++   G + + LT   +   ++P +S + +++A+A+    +   V++M  +  
Sbjct: 44  TFKGDLFLVSSTGGDAKQLT-FHEAHDYKPVWSKDGEQLAFASDRYGN-FDVFIMSAQGG 101

Query: 248 RAPKRIGNFRSMILAP-RFSSNGKRALISVQK-----------DEAMDIYSVDLQSNATE 295
            A +    F S    P  FS++ +  +    +               ++Y V  +S   +
Sbjct: 102 PATRL--TFHSNDEQPFDFSADNQNVIFGATRMDIAEHRQYPTGSQPELYQVPKKSGRVD 159

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQ------------LYVMQSNGSDQKRISQ 343
           ++       +    S D +++++   + G+ +            +++  +       ++ 
Sbjct: 160 QIWTIPAEYVQT--SQDGTKMIYHDKKGGENEWRKHHESGIARDIWLYDAEEGSHSMLT- 216

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSP 399
           D      +PV+SP    I +   +   F +  M  + + ++ L   S    P    T S 
Sbjct: 217 DYYGEDRNPVFSPDESEIYYLSEANGSFNVFAMPLN-NPKQSLALTSLTDFPVRFLTISQ 275

Query: 400 SG 401
            G
Sbjct: 276 DG 277



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 61/144 (42%), Gaps = 3/144 (2%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +  S++  ++EP +SP+ +K+AY        ++ +   ++     P  + + R       
Sbjct: 408 VLVSKEVDVYEPDYSPDGKKLAYVEDRRTLKVMDLESQESVTLMTPDELFHMRDGDQYFT 467

Query: 265 FSSNGKRALISVQKDE-AMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDR 322
           +S + K  L +        ++  +D      ++ LT + + +    +  +  Q+++ S+R
Sbjct: 468 WSPDSKWLLATYNPTMVNSEVVLLDATGKEPKKNLTKSGYGDSQPVWVNEGKQMLWFSNR 527

Query: 323 EGKEQLYVMQSNGSDQKRISQDKE 346
           +G         + +D   +  DKE
Sbjct: 528 DGMRSYATSGRSQNDVYSLFFDKE 551


>gi|297809975|ref|XP_002872871.1| hypothetical protein ARALYDRAFT_490390 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297318708|gb|EFH49130.1| hypothetical protein ARALYDRAFT_490390 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 652

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 84/255 (32%), Gaps = 51/255 (20%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPK 251
           + V   DG+  +  T  +D+  F   +SP ++ V Y +         + +   RI   P 
Sbjct: 366 IKVAKSDGS--KRWTLIKDRTAFYNSWSPTERHVIYTSLGPIFRPAGIAVQIARIKFDPS 423

Query: 252 RIGNFR---------------SMILAPRFSSNGKRALISVQKDEAMDIYSVDL-----QS 291
            +   +                    P  S +GK  +    +    ++Y VD        
Sbjct: 424 DLTADKEELPCDVKILTLENTGNNAFPSCSPDGKSIVFRSGRSGHKNLYIVDAVNGESNG 483

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQL-----YVMQSNGSDQKRISQDKE 346
               RLT   +I+    +SP    I F S+R     +     YV++ +GS  +RI     
Sbjct: 484 GGIRRLTEGPWIDTMPCWSPKGDLIGFSSNRHNPANIDAFGAYVVRPDGSGLRRILISGP 543

Query: 347 AS--------YFDPVWSPQGDLIAFTKF----------SGEKFA----IGVMKKDGSQER 384
                          ++  GD + FT               +F     + V+K DG+  R
Sbjct: 544 EGSEEAARERVNHVSFNKDGDWLVFTANLCGITAEPVAMPNQFQPYGDLYVVKLDGTGLR 603

Query: 385 LLV-EDSNLQAPTWS 398
            L         PTW 
Sbjct: 604 RLTWNGYEDGTPTWH 618



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 57/324 (17%), Positives = 101/324 (31%), Gaps = 55/324 (16%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI--LFEPRFSPNQQKVAYA 229
            F+        +   G+    + + D D    + +T   +     + P  S N + + Y 
Sbjct: 250 AFHDGKRIAVATRRRGVNHRHIEIYDLDHKTFQPVTEPLNPSFHHYNPFVSSNSEFLGYH 309

Query: 230 TYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            +  E      +      I    K +   R     P  S NG    ++   D    I   
Sbjct: 310 RFRGESTQGESIVPNIESIVSPIKTLRLLRINGSFPSSSPNGDLIALNSDFDINGGIKVA 369

Query: 288 DLQSNATERLT----NTLFINISASYSPDSSQIVFES------DREGKEQLYVMQSNGSD 337
               +  +R T     T F N   S+SP    +++ S            Q+  ++ + SD
Sbjct: 370 KSDGS--KRWTLIKDRTAFYN---SWSPTERHVIYTSLGPIFRPAGIAVQIARIKFDPSD 424

Query: 338 QKR-----------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-----DGS 381
                         ++ +   +   P  SP G  I F         + ++       +G 
Sbjct: 425 LTADKEELPCDVKILTLENTGNNAFPSCSPDGKSIVFRSGRSGHKNLYIVDAVNGESNGG 484

Query: 382 QERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNGRNETLINTP- 434
             R L E   +   P WSP G  + FS  +         G+ +   D +G    LI+ P 
Sbjct: 485 GIRRLTEGPWIDTMPCWSPKGDLIGFSSNRHNPANIDAFGAYVVRPDGSGLRRILISGPE 544

Query: 435 -------------AYASDPQWVGF 445
                        ++  D  W+ F
Sbjct: 545 GSEEAARERVNHVSFNKDGDWLVF 568



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 56/263 (21%), Positives = 95/263 (36%), Gaps = 36/263 (13%)

Query: 214 LFEPRFSPNQQKVAYATYDDE---DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            F P    + +++A AT         + +Y +D +  +      N       P  SSN +
Sbjct: 245 CFTPAAFHDGKRIAVATRRRGVNHRHIEIYDLDHKTFQPVTEPLNPSFHHYNPFVSSNSE 304

Query: 271 RALISVQKDEAMDIYSV--DLQS--NATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                  + E+    S+  +++S  +  + L          S SP+   I   SD +   
Sbjct: 305 FLGYHRFRGESTQGESIVPNIESIVSPIKTLRLLRINGSFPSSSPNGDLIALNSDFDING 364

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDG 380
            + V +S+GS  KR +  K+ + F   WSP    + +T        +G    I  +K D 
Sbjct: 365 GIKVAKSDGS--KRWTLIKDRTAFYNSWSPTERHVIYTSLGPIFRPAGIAVQIARIKFDP 422

Query: 381 SQ-----------ERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---- 423
           S             ++L      N   P+ SP G+S++F   + G     LY +D     
Sbjct: 423 SDLTADKEELPCDVKILTLENTGNNAFPSCSPDGKSIVFRSGRSGHK--NLYIVDAVNGE 480

Query: 424 --NGRNETLINTPAYASDPQWVG 444
              G    L   P   + P W  
Sbjct: 481 SNGGGIRRLTEGPWIDTMPCWSP 503



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 78/209 (37%), Gaps = 17/209 (8%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRID--------RAPKRIGNFRSMILAPRFSS 267
            P +S +   V +    D+    ++ +D   +          P R+         P    
Sbjct: 194 WPTWSGD-STVFFHHQADDGWWSIFRVDIPENFKKYSDFPITPIRVTPSGLHCFTPAAFH 252

Query: 268 NGKRALISVQKDE--AMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDR 322
           +GKR  ++ ++       I   DL     + +T   N  F + +   S +S  + +   R
Sbjct: 253 DGKRIAVATRRRGVNHRHIEIYDLDHKTFQPVTEPLNPSFHHYNPFVSSNSEFLGYHRFR 312

Query: 323 EGKEQL-YVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               Q   ++ +  S    I   +    +   P  SP GDLIA          I V K D
Sbjct: 313 GESTQGESIVPNIESIVSPIKTLRLLRINGSFPSSSPNGDLIALNSDFDINGGIKVAKSD 372

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           GS+   L++D      +WSP+ R +I++ 
Sbjct: 373 GSKRWTLIKDRTAFYNSWSPTERHVIYTS 401



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 77/196 (39%), Gaps = 18/196 (9%)

Query: 267 SNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPD-SSQIVFESDREG 324
             G     +V +     D++S+ + +    RLT+ + +N +A +  D S  +VF S+R G
Sbjct: 4   PKGTIIFTTVGRTHYGFDVFSLHIATAVERRLTDGVSVNFNAQFVNDKSDDVVFVSERNG 63

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---FSGEKFA----IGVMK 377
             ++Y  +   S+ +++    E+ + D     Q + + F          F     +  ++
Sbjct: 64  SARIYKTRPGISEPEQLPGAPESYFHDRPIITQSNRLYFISAHEQPDRHFKNWSALYTVE 123

Query: 378 KDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN------GRNE 428
            +G +    R+   D+   +P  S SG  L  +       G + + I+ +         E
Sbjct: 124 LNGEEREVTRVTPLDTADFSPAVSQSGDFLAVASYGSRSWGGEFHEINTDITVFKASEPE 183

Query: 429 TLINTPAYASDPQWVG 444
           T +        P W G
Sbjct: 184 TRVVICERGGWPTWSG 199



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/300 (12%), Positives = 86/300 (28%), Gaps = 30/300 (10%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             +   +  +V        +  +    A  R LT     + F  +F  ++        + 
Sbjct: 3   TPKGTIIFTTVGRTHYGFDVFSLHIATAVERRLTDGVS-VNFNAQFVNDKSDDVVFVSER 61

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-------AMDIYS 286
               R+Y     I    +  G   S        +   R       ++          +Y+
Sbjct: 62  NGSARIYKTRPGISEPEQLPGAPESYFHDRPIITQSNRLYFISAHEQPDRHFKNWSALYT 121

Query: 287 VDLQS--NATERLTNTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSN------GS 336
           V+L        R+T     + S + S     +   S   R    + + + ++        
Sbjct: 122 VELNGEEREVTRVTPLDTADFSPAVSQSGDFLAVASYGSRSWGGEFHEINTDITVFKASE 181

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG----------SQERLL 386
            + R+   +   +  P WS    +    +     ++I  +              +  R+ 
Sbjct: 182 PETRVVICERGGW--PTWSGDSTVFFHHQADDGWWSIFRVDIPENFKKYSDFPITPIRVT 239

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
               +   P     G+ +  + ++ G     +   DL+ +    +  P   S   +  F+
Sbjct: 240 PSGLHCFTPAAFHDGKRIAVATRRRGVNHRHIEIYDLDHKTFQPVTEPLNPSFHHYNPFV 299


>gi|114048456|ref|YP_739006.1| transcriptional regulator domain-containing protein [Shewanella sp.
           MR-7]
 gi|113889898|gb|ABI43949.1| transcriptional regulator domain protein [Shewanella sp. MR-7]
          Length = 716

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 52/277 (18%), Positives = 104/277 (37%), Gaps = 55/277 (19%)

Query: 219 FSPNQQKVAYAT-YDDEDILRVYLMDT-RIDRAPKRIG-----NFRSMILAPRFSSNGKR 271
            S + Q +AY + ++   +  +Y +   + D   +R+      N+    LA  FS +G+ 
Sbjct: 286 ISADGQYLAYVSSHEAGKVGGIYRLSLVQPDAKAERLSCEAHCNYEDRDLA--FSPDGRW 343

Query: 272 ALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             I+ +    + DI+  DL S + +RLT+ L      S++PD+  +VF ++  G    ++
Sbjct: 344 LAIARRFSNISEDIFIRDLASASEKRLTHGLEDIRGLSWTPDAQSLVFATEDSGSRNGFI 403

Query: 331 MQSNGSDQKRISQDK-------------------------------------------EA 347
           +    +  + +  +                                              
Sbjct: 404 IDIETTHIRSLDVEGMSYPSSVSEEGELVYHQYRRQFQMAYFSLGESVPGSLFPLLYSSI 463

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
           S+ +P +SP+   I F         I     +G +        S +  P WSP G  + F
Sbjct: 464 SHRNPDYSPEAKRIVFVSSETGYNEIWTSDINGKKLEQHTHLKSRVAYPRWSPDGAKIAF 523

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQW 442
               D + G++++ +DL  +N T + +  +    P W
Sbjct: 524 IAPDDRNEGNRIFILDLASKNITALASSYHNHGRPSW 560



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 50/311 (16%), Positives = 106/311 (34%), Gaps = 32/311 (10%)

Query: 145 FSSPASWRKIAHTISD---DIY-------------QSITGEKGDFNSRILFVSESVVSGI 188
           FS    W  IA   S+   DI+               +   +G   +             
Sbjct: 337 FSPDGRWLAIARRFSNISEDIFIRDLASASEKRLTHGLEDIRGLSWTPDAQSLVFATEDS 396

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              +  ++D +  +IR L    + + +    S    ++ Y  Y  +  +  + +   +  
Sbjct: 397 GSRNGFIIDIETTHIRSL--DVEGMSYPSSVSEEG-ELVYHQYRRQFQMAYFSLGESVPG 453

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           +   +         P +S   KR +    +    +I++ D+     E+ T+         
Sbjct: 454 SLFPLLYSSISHRNPDYSPEAKRIVFVSSETGYNEIWTSDINGKKLEQHTHLKSRVAYPR 513

Query: 309 YSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +SPD ++I F +  DR    +++++     +   ++     ++  P W+ QG  +  +  
Sbjct: 514 WSPDGAKIAFIAPDDRNEGNRIFILDLASKNITALAS-SYHNHGRPSWNWQGTAVLASTT 572

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            G    I     D S  R++       A  ++ S    +FSR       + L+ IDL   
Sbjct: 573 DG----ITEFYLDNSTPRVI--SPLTMAVGFAKSANEFVFSRY----GVNGLWQIDLTQP 622

Query: 427 NETLINTPAYA 437
            +     P   
Sbjct: 623 EQVQEIIPGKV 633


>gi|242801985|ref|XP_002483884.1| WD-repeat protein, putative [Talaromyces stipitatus ATCC 10500]
 gi|218717229|gb|EED16650.1| WD-repeat protein, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1596

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 93/264 (35%), Gaps = 19/264 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG +  ++ + D     +R         +    FSP  + VA  + D      V L D
Sbjct: 974  VASGSVDYTIKLWDLATGTLRQTLEGHSSSVRAVAFSPKGKLVASGSDDK----TVKLWD 1029

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
                   + +      + A  FS +GK    S   D+ + ++  DL +    + L +   
Sbjct: 1030 LATGTLRQTLEGHSGSVFAVAFSPDGKLVA-SGSDDKTVKLW--DLATGTLRQTLEDHSG 1086

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               + ++SPD       S     + + +        +++ +D   S F   +SP G L+A
Sbjct: 1087 PVQTVAFSPDGKLTASGSY---DKTVKLWDLATGTLRQMLEDHSGSVFAVAFSPNGKLVA 1143

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                      I +        R  ++   S +QA  +SP+G+ +        D   KL+ 
Sbjct: 1144 SGSVDCT---IKLWDSATGTLRQTLKGYSSLVQAVAFSPNGKLVA---SGSVDYTIKLWD 1197

Query: 421  IDLNGRNETLINTPAYASDPQWVG 444
            +      +TL    +      +  
Sbjct: 1198 LATGTLRQTLEGHSSSVRAVAFSP 1221



 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 76/206 (36%), Gaps = 16/206 (7%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            ++         +F   FSP+ + VA  + D      + L D       + +    S + A
Sbjct: 951  VQQTLEGHSGSVFAVAFSPDGKLVASGSVD----YTIKLWDLATGTLRQTLEGHSSSVRA 1006

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
              FS  GK    S   D+ + ++  DL +    + L        + ++SPD   +   SD
Sbjct: 1007 VAFSPKGKLVA-SGSDDKTVKLW--DLATGTLRQTLEGHSGSVFAVAFSPDGKLVASGSD 1063

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                + + +        ++  +D         +SP G L A   +      + +      
Sbjct: 1064 ---DKTVKLWDLATGTLRQTLEDHSGPVQTVAFSPDGKLTASGSYDKT---VKLWDLATG 1117

Query: 382  QERLLVED--SNLQAPTWSPSGRSLI 405
              R ++ED   ++ A  +SP+G+ + 
Sbjct: 1118 TLRQMLEDHSGSVFAVAFSPNGKLVA 1143



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 95/314 (30%), Gaps = 42/314 (13%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                +    +LWD                 + R+     S  +        G        
Sbjct: 1143 ASGSVDCTIKLWDSATG-------------TLRQTLKGYSSLVQAVAFSPNG-------- 1181

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              + V SG +  ++ + D     +R         +    FSP+ + VA  + D      +
Sbjct: 1182 --KLVASGSVDYTIKLWDLATGTLRQTLEGHSSSVRAVAFSPDGKLVASGSVD----YTI 1235

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
             L D       + +      +LA  FS +GK    S   D+ + ++  D  +    + L 
Sbjct: 1236 KLWDPATGTLRQTLEGHSGPVLAVAFSPDGK-LTASGSYDKTVKLW--DPATGTLRQALE 1292

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +      + ++SPD       S     + + +        ++  +          +SP  
Sbjct: 1293 DHSGPVQTVAFSPDGKLTASGSY---DKTVKLWDPATGTLRQTLEGHSDLIQTVAFSPNS 1349

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGS 416
             L+A   +      + +        R   E  +   +   +SP G+          D   
Sbjct: 1350 KLVASGSYDKT---VKLWDLATGTLRQTFEGHSDLVRVVAFSPDGKLTASGSY---DKTV 1403

Query: 417  KLYSIDLNGRNETL 430
            KL+ +      +TL
Sbjct: 1404 KLWDLATGTLRQTL 1417



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 84/258 (32%), Gaps = 20/258 (7%)

Query: 164  QSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            Q++    G   +           SG    ++ + D     +R        ++    FSPN
Sbjct: 1289 QALEDHSGPVQTVAFSPDGKLTASGSYDKTVKLWDPATGTLRQTLEGHSDLIQTVAFSPN 1348

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             + VA  +YD      V L D       +       ++    FS +GK    S   D+ +
Sbjct: 1349 SKLVASGSYDK----TVKLWDLATGTLRQTFEGHSDLVRVVAFSPDGK-LTASGSYDKTV 1403

Query: 283  DIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             ++  DL +    + L        +  +SP    +   S     + + +        ++ 
Sbjct: 1404 KLW--DLATGTLRQTLEGHSSSVRAVVFSPKGKLVASGSY---DKTVKLWDPATGTLRQT 1458

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSP 399
             +         V+SP G L+    +      + +        R  +ED    ++   +SP
Sbjct: 1459 LEGHSGPVQTVVFSPNGKLLVSGSYDKT---VKLWDLSTGTLRQTLEDHSGLVRVVAFSP 1515

Query: 400  SGRSLIFSRKKDGDTGSK 417
             G+   F     G   ++
Sbjct: 1516 DGK---FLETNQGRLNTE 1530



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 104/314 (33%), Gaps = 42/314 (13%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                +    +LWD+      + +      +S R +A   S D                  
Sbjct: 1185 ASGSVDYTIKLWDLATGT--LRQTLEGHSSSVRAVA--FSPD------------------ 1222

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              + V SG +  ++ + D     +R         +    FSP+ +  A  +YD      V
Sbjct: 1223 -GKLVASGSVDYTIKLWDPATGTLRQTLEGHSGPVLAVAFSPDGKLTASGSYDK----TV 1277

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
             L D       + + +    +    FS +GK    S   D+ + ++  D  +    + L 
Sbjct: 1278 KLWDPATGTLRQALEDHSGPVQTVAFSPDGK-LTASGSYDKTVKLW--DPATGTLRQTLE 1334

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                +  + ++SP+S  +   S     + + +        ++  +          +SP G
Sbjct: 1335 GHSDLIQTVAFSPNSKLVASGSY---DKTVKLWDLATGTLRQTFEGHSDLVRVVAFSPDG 1391

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             L A   +      + +        R  +E   S+++A  +SP G+ +        D   
Sbjct: 1392 KLTASGSYDKT---VKLWDLATGTLRQTLEGHSSSVRAVVFSPKGKLVASGSY---DKTV 1445

Query: 417  KLYSIDLNGRNETL 430
            KL+        +TL
Sbjct: 1446 KLWDPATGTLRQTL 1459



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 14/189 (7%)

Query: 219  FSPNQQ--KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            F+P     +  Y       +  +  +++      + +      + A  FS +GK    S 
Sbjct: 919  FAPKGSVIRNKYIDKIPNWVRGLPEVESAWSAVQQTLEGHSGSVFAVAFSPDGKLVA-SG 977

Query: 277  QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D  + ++  DL +    + L        + ++SP    +   SD    + + +     
Sbjct: 978  SVDYTIKLW--DLATGTLRQTLEGHSSSVRAVAFSPKGKLVASGSD---DKTVKLWDLAT 1032

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQ 393
               ++  +    S F   +SP G L+A          + +        R  +ED    +Q
Sbjct: 1033 GTLRQTLEGHSGSVFAVAFSPDGKLVASGSDDKT---VKLWDLATGTLRQTLEDHSGPVQ 1089

Query: 394  APTWSPSGR 402
               +SP G+
Sbjct: 1090 TVAFSPDGK 1098



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 75/243 (30%), Gaps = 34/243 (13%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     +LWD                 + R+     SD I                 
Sbjct: 1311 ASGSYDKTVKLWDPATG-------------TLRQTLEGHSDLIQTVAFSPN--------- 1348

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
             S+ V SG    ++ + D     +R        ++    FSP+ +  A  +YD      V
Sbjct: 1349 -SKLVASGSYDKTVKLWDLATGTLRQTFEGHSDLVRVVAFSPDGKLTASGSYDK----TV 1403

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
             L D       + +    S + A  FS  GK    S   D+ + ++  D  +    + L 
Sbjct: 1404 KLWDLATGTLRQTLEGHSSSVRAVVFSPKGKLVA-SGSYDKTVKLW--DPATGTLRQTLE 1460

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   +  +SP+   +V  S     + + +   +    ++  +D         +SP G
Sbjct: 1461 GHSGPVQTVVFSPNGKLLVSGSY---DKTVKLWDLSTGTLRQTLEDHSGLVRVVAFSPDG 1517

Query: 359  DLI 361
              +
Sbjct: 1518 KFL 1520



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 61/199 (30%), Gaps = 39/199 (19%)

Query: 108  AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            + ++       +G            +LWD+      + +      +S R +         
Sbjct: 1379 SDLVRVVAFSPDGKLTASGSYDKTVKLWDLATGT--LRQTLEGHSSSVRAV--------- 1427

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              +   KG          + V SG    ++ + D     +R         +    FSPN 
Sbjct: 1428 --VFSPKG----------KLVASGSYDKTVKLWDPATGTLRQTLEGHSGPVQTVVFSPNG 1475

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            + +   +YD      V L D       + + +   ++    FS +GK            +
Sbjct: 1476 KLLVSGSYDK----TVKLWDLSTGTLRQTLEDHSGLVRVVAFSPDGKFL--------ETN 1523

Query: 284  IYSVDLQSNATERLTNTLF 302
               ++ +S+    L+ T  
Sbjct: 1524 QGRLNTESHHVRSLSQTPS 1542


>gi|94967294|ref|YP_589342.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549344|gb|ABF39268.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 894

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 82/230 (35%), Gaps = 13/230 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--S 275
            FS        A     + +       R  ++   + +      A   S NG+   +   
Sbjct: 586 TFSSTGTGAVLAQLRTGNAVSQLTWFDRSGKSLGDVAD-PDYFGALSLSPNGQSLAVDKV 644

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               +  D++ +DL   A  R+T    I+    +SP +S+I F ++RE    +Y    +G
Sbjct: 645 DSGSQNTDVWLLDLHGGAPRRITFDPSIDALPVWSPAASEIAFVTNRELHFSVYRKSVDG 704

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              + +  +     +   WS  G    +   +G  +          +E L    S L+  
Sbjct: 705 HATESVLINDLPDNYPNDWSRDGKYFLYVHGTGLWYL--TFSDMTKKEFLNAGTSALKTG 762

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSI---DLNGRNETLINTPAYASDPQW 442
            +SP G+ + ++  + G    ++Y     D  G+ E    +      P W
Sbjct: 763 HFSPDGKWIAYASNESGKW--EIYVTSFPDAKGKWEI---SSGGGEQPHW 807



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 95/294 (32%), Gaps = 11/294 (3%)

Query: 120 GKDRLRV-EFRLWDVKDRKQIIGKKFFSSPASWR-KIAHTISDDIYQSITGEKGDFNSRI 177
                    + L+       +  ++F ++      + A  +SD  Y          ++  
Sbjct: 535 SNGSYAAPGYLLY--YRDNTLFAQRFNATKLQLEGEPAALLSDLQYMPRIQRATFSSTGT 592

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
             V   + +G   + L   DR G ++  +             SPN Q +A    D     
Sbjct: 593 GAVLAQLRTGNAVSQLTWFDRSGKSLGDVADPDYFGAL--SLSPNGQSLAVDKVDSGSQN 650

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-R 296
               +      AP+RI    S+   P +S           ++    +Y   +  +ATE  
Sbjct: 651 TDVWLLDLHGGAPRRITFDPSIDALPVWSPAASEIAFVTNRELHFSVYRKSVDGHATESV 710

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L N L  N    +S D    ++         L+ +  +   +K       ++     +SP
Sbjct: 711 LINDLPDNYPNDWSRDGKYFLYV----HGTGLWYLTFSDMTKKEFLNAGTSALKTGHFSP 766

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            G  IA+      K+ I V     ++ +  +     + P W   G+ L +    
Sbjct: 767 DGKWIAYASNESGKWEIYVTSFPDAKGKWEISSGGGEQPHWRGDGKELYYLSSS 820



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/358 (13%), Positives = 101/358 (28%), Gaps = 75/358 (20%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            S     +  A   +           G   + + + SE+  +GI    L      G+   
Sbjct: 340 SSPATQAQYFAAPFTFTARDLTIAPNGHTVAVVGYRSEAHKNGIFLYEL------GSQNV 393

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L P  D   F P +S +   + +  + D  + RV +            G          
Sbjct: 394 RLVPDTDGASF-PFWSADGLSLGF--FADGKLRRVDIAGGPAQTLCDAPGGRGG-----T 445

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-----ASYSPDSSQIVFE 319
           ++ +G   + +        ++ +       E+LT               + PD    ++ 
Sbjct: 446 WNKDG-VIVFTPSGALRTGLWRISAAGGKPEQLTTPDASKGEDGHRWPVFLPDGQHYIYT 504

Query: 320 ---------------------------------SDREGKEQLYVMQSNGSDQK------R 340
                                            S       LY   +    Q+      +
Sbjct: 505 IFNNTVHTEFAGLAVGALGSKEQHFLLHAISNGSYAAPGYLLYYRDNTLFAQRFNATKLQ 564

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-------EDSNLQ 393
           +  +  A   D  + P+     F+       A+    + G+    L           ++ 
Sbjct: 565 LEGEPAALLSDLQYMPRIQRATFSSTGTG--AVLAQLRTGNAVSQLTWFDRSGKSLGDVA 622

Query: 394 APTW------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVG 444
            P +      SP+G+SL   +   G   + ++ +DL+G     I   P+  + P W  
Sbjct: 623 DPDYFGALSLSPNGQSLAVDKVDSGSQNTDVWLLDLHGGAPRRITFDPSIDALPVWSP 680


>gi|317479784|ref|ZP_07938904.1| hypothetical protein HMPREF1007_02020 [Bacteroides sp. 4_1_36]
 gi|316903990|gb|EFV25824.1| hypothetical protein HMPREF1007_02020 [Bacteroides sp. 4_1_36]
          Length = 1085

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 111/303 (36%), Gaps = 42/303 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ E G FN           +     ++ +       +RYL+ + D  L    +  +
Sbjct: 231 FYYLSEENGSFN-------IYRRTPGDAKAVQLTHYTKNPVRYLSAATDGRLC---YGFD 280

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +        +   + + ++  R D+   R             S +GK     ++ D   
Sbjct: 281 GEIYTLLPGGEAQKVNISIVSDRNDKDIIRQIKSSGATEM-AVSPDGKEVAFVLRGD--- 336

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   ++   T+++TNT     +  ++PD   +V+ S+R G  QLY       D+K  +
Sbjct: 337 -VYVTSVEYKTTKQITNTPCQERTVDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKLFT 395

Query: 343 Q----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                      + +A+ F P +SP G  IAF +       I V+       R +++    
Sbjct: 396 YATELKEERLTNSDAASFQPQYSPDGKEIAFLENRST---IRVINLKTKDVRTVMDGKYQ 452

Query: 393 QAPT-------WSPSGRSLIFSRKK---DGDTGSKLYSIDLNGRNE--TLINTPAYASDP 440
            + +       WSP  + ++         G     +  ++ +G+ E   L  +     + 
Sbjct: 453 YSYSDGDQWFQWSPDSKWIL--SDYIGVGGWNNKDVVLLNADGKGEMVNLTESGYNDGNA 510

Query: 441 QWV 443
           +WV
Sbjct: 511 KWV 513



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 76/220 (34%), Gaps = 34/220 (15%)

Query: 253 IGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +  F     AP +      S +G     + + D    IY+V +      ++T     + +
Sbjct: 13  LAGFTFAQDAPLWMRHSVISPDGTTIAFTYKGD----IYTVPVAGGRAMQITTNPAYDTA 68

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-----------QDKEASYFDPVWS 355
             +SPDS +I F SDR G   +Y++  +G + +R++            D     F     
Sbjct: 69  PVWSPDSKRIAFASDRMGSLDVYIVAKDGGEPRRLTTHSGSETPLAFTDAGHVLFSAGIM 128

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--------FS 407
           P  + + F   +G+   +  +  +G +  ++     ++  + +  G  L         + 
Sbjct: 129 PSAEAVVFPS-NGQFNQVYRVSVEGGRPTMISSMP-MECISINKEGAMLYQDKKGYEDYW 186

Query: 408 RKKD-GDTGSKLYSIDLNGRNE--TLINTPAYASDPQWVG 444
           RK         ++        +   L        +P W  
Sbjct: 187 RKHHVSPIARDIWMYTPGKEPQYRQLTTFGGEDREPVWAP 226



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 76/229 (33%), Gaps = 37/229 (16%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +     SP+   +A+      DI  V +   R      +I    +   AP +S + KR 
Sbjct: 25  WMRHSVISPDGTTIAFTY--KGDIYTVPVAGGRAM----QITTNPAYDTAPVWSPDSKRI 78

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINI------------SASYSPDSSQIVFES 320
             +  +  ++D+Y V        RLT                   SA   P +  +VF S
Sbjct: 79  AFASDRMGSLDVYIVAKDGGEPRRLTTHSGSETPLAFTDAGHVLFSAGIMPSAEAVVFPS 138

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------- 371
           +     Q+Y +   G     IS            + +G ++   K   E +         
Sbjct: 139 N-GQFNQVYRVSVEGGRPTMISSMP---MECISINKEGAMLYQDKKGYEDYWRKHHVSPI 194

Query: 372 --AIGVMKKDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
              I +    G +    +L       + P W+P G++  +  +++G   
Sbjct: 195 ARDIWMYTP-GKEPQYRQLTTFGGEDREPVWAPDGKTFYYLSEENGSFN 242



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 51/398 (12%), Positives = 108/398 (27%), Gaps = 136/398 (34%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            ++    + ++   K  +  +   G     +T         P +SP+ +++A+A+     
Sbjct: 29  SVISPDGTTIAFTYKGDIYTVPVAGGRAMQITT-NPAYDTAPVWSPDSKRIAFASDRMGS 87

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMIL---------------------APRFSSNGKR--- 271
            L VY++  +    P+R+                             A  F SNG+    
Sbjct: 88  -LDVYIVA-KDGGEPRRLTTHSGSETPLAFTDAGHVLFSAGIMPSAEAVVFPSNGQFNQV 145

Query: 272 ALISVQKDEAMDIYSVDLQ---------------------------------------SN 292
             +SV+      I S+ ++                                         
Sbjct: 146 YRVSVEGGRPTMISSMPMECISINKEGAMLYQDKKGYEDYWRKHHVSPIARDIWMYTPGK 205

Query: 293 AT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-------- 342
                +LT     +    ++PD     + S+  G   +Y      +   +++        
Sbjct: 206 EPQYRQLTTFGGEDREPVWAPDGKTFYYLSEENGSFNIYRRTPGDAKAVQLTHYTKNPVR 265

Query: 343 -------------QDKEASYFDP--------------------------------VWSPQ 357
                         D E     P                                  SP 
Sbjct: 266 YLSAATDGRLCYGFDGEIYTLLPGGEAQKVNISIVSDRNDKDIIRQIKSSGATEMAVSPD 325

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG---- 412
           G  +AF         + V   +    + +       +   ++P GR+L+++ ++ G    
Sbjct: 326 GKEVAFVLRGD----VYVTSVEYKTTKQITNTPCQERTVDFAPDGRTLVYASERGGLWQL 381

Query: 413 ------DTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                     KL++     + E L N+ A +  PQ+  
Sbjct: 382 YTSTIVRKDEKLFTYATELKEERLTNSDAASFQPQYSP 419



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 50/123 (40%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F+P++SP+ +++A+        ++ +   D R     K   ++       ++
Sbjct: 405 LTNSDAASFQPQYSPDGKEIAFLENRSTIRVINLKTKDVRTVMDGKYQYSYSDGDQWFQW 464

Query: 266 SSNGKRAL---ISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K  L   I V      D+  ++         LT + + + +A +      +++ SD
Sbjct: 465 SPDSKWILSDYIGVGGWNNKDVVLLNADGKGEMVNLTESGYNDGNAKWVLGGKAMIWTSD 524

Query: 322 REG 324
           R G
Sbjct: 525 RAG 527


>gi|242805545|ref|XP_002484554.1| G-protein beta WD- 40 repeats containing protein, putative
            [Talaromyces stipitatus ATCC 10500]
 gi|218715179|gb|EED14601.1| G-protein beta WD- 40 repeats containing protein, putative
            [Talaromyces stipitatus ATCC 10500]
          Length = 1211

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 53/327 (16%), Positives = 111/327 (33%), Gaps = 38/327 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDR---KQIIGKKFFSSP----ASWRKIAHTISDDIYQSITGE 169
             +     L    +LWD       K + G              ++IA +  D   +     
Sbjct: 742  KQIASGSLDDTIKLWDATTGDLQKTLAGHSSAVMKVAFSPDGKQIASSSDDKTIKLWDAA 801

Query: 170  KGD-------FNSRILFVSES-----VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
             GD        +S ++ V+ S     + SG    ++   D    +++         +   
Sbjct: 802  TGDLQKILAGHSSGVITVAFSPDGKQIASGSNDKTIKFWDAATGDLQKTLAGHSSAVVTV 861

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FS + +++A  +YD      +   D       K +     ++    FS +GK+   S  
Sbjct: 862  AFSSDGKQIASGSYD----CTIKRWDATTGNLQKTLVGHSGLVQTVAFSPDGKQIA-SGS 916

Query: 278  KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D+ + ++  D  +   ++ L       +  ++SPD  QI   S+    + + +  +   
Sbjct: 917  LDDTIKLW--DATTGDLQKTLAGHSSAVMKVAFSPDGKQIASGSE---DDTIKLWDAATG 971

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQA 394
            D ++      ++     +SP G  IA          I +        +  L+     +Q 
Sbjct: 972  DLQKTLAVHSSAVVTVAFSPDGKQIASGSDDNT---IKLWDATTGNLQKTLVGHSGLVQT 1028

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +SP G+ +        D   K++ I
Sbjct: 1029 VAFSPDGKQIASVSD---DKTIKVWDI 1052



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 99/274 (36%), Gaps = 29/274 (10%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG   +++ + D    +++       + +    FSP+ +++A  ++DD     + L
Sbjct: 658 KQIASGSDDDTIKLWDAATGDLQKTLAGDSRGVVTVAFSPDGKQIASGSHDD----TIKL 713

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       K + +  S +    FS +GK+   S   D+ + ++  D  +   ++ L   
Sbjct: 714 WDATTGDLQKTLADHLSSVCTIAFSPDGKQIA-SGSLDDTIKLW--DATTGDLQKTLAGH 770

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +  ++SPD  QI   SD    + + +  +   D ++I     +      +SP G  
Sbjct: 771 SSAVMKVAFSPDGKQIASSSD---DKTIKLWDAATGDLQKILAGHSSGVITVAFSPDGKQ 827

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           IA          I          +  +    S +    +S  G+ +       G     +
Sbjct: 828 IASGSNDKT---IKFWDAATGDLQKTLAGHSSAVVTVAFSSDGKQIA-----SGSYDCTI 879

Query: 419 YSIDLNGRNET--------LINTPAYASDPQWVG 444
              D    N          L+ T A++ D + + 
Sbjct: 880 KRWDATTGNLQKTLVGHSGLVQTVAFSPDGKQIA 913



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 87/227 (38%), Gaps = 16/227 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             + SG   N++ + D    +++         +    FSP+ +++A  + DD     + L
Sbjct: 616 NQIASGSDDNTIKLWDATTGDLQETLTGHLGRVLTVDFSPDGKQIASGSDDD----TIKL 671

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       K +      ++   FS +GK+   S   D+ + ++  D  +   ++ L + 
Sbjct: 672 WDAATGDLQKTLAGDSRGVVTVAFSPDGKQIA-SGSHDDTIKLW--DATTGDLQKTLADH 728

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           L    + ++SPD  QI   S     + + +  +   D ++      ++     +SP G  
Sbjct: 729 LSSVCTIAFSPDGKQIASGSL---DDTIKLWDATTGDLQKTLAGHSSAVMKVAFSPDGKQ 785

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
           IA +        I +        + ++    S +    +SP G+ + 
Sbjct: 786 IASSSDDKT---IKLWDAATGDLQKILAGHSSGVITVAFSPDGKQIA 829



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 92/254 (36%), Gaps = 27/254 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A++          +    FSP+  ++A  + D+     + L D       + +      +
Sbjct: 593 ASLIQTLAGHSCPVLTVAFSPDGNQIASGSDDN----TIKLWDATTGDLQETLTGHLGRV 648

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
           L   FS +GK+   S   D+ + ++  D  +   ++ L       ++ ++SPD  QI   
Sbjct: 649 LTVDFSPDGKQIA-SGSDDDTIKLW--DAATGDLQKTLAGDSRGVVTVAFSPDGKQIASG 705

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     + + +  +   D ++   D  +S     +SP G  IA          I +    
Sbjct: 706 SH---DDTIKLWDATTGDLQKTLADHLSSVCTIAFSPDGKQIASGSLDDT---IKLWDAT 759

Query: 380 GSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN----- 432
               +  +    S +    +SP G+ +  S     D   KL+     G  + ++      
Sbjct: 760 TGDLQKTLAGHSSAVMKVAFSPDGKQIASSSD---DKTIKLWDA-ATGDLQKILAGHSSG 815

Query: 433 --TPAYASDPQWVG 444
             T A++ D + + 
Sbjct: 816 VITVAFSPDGKQIA 829



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 84/219 (38%), Gaps = 14/219 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + + SG    ++   D    N++        ++    FSP+ +++A  + DD     + L
Sbjct: 868  KQIASGSYDCTIKRWDATTGNLQKTLVGHSGLVQTVAFSPDGKQIASGSLDD----TIKL 923

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D       K +    S ++   FS +GK+   S  +D+ + ++  D  +   ++ L   
Sbjct: 924  WDATTGDLQKTLAGHSSAVMKVAFSPDGKQIA-SGSEDDTIKLW--DAATGDLQKTLAVH 980

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                ++ ++SPD  QI   SD      + +  +   + ++             +SP G  
Sbjct: 981  SSAVVTVAFSPDGKQIASGSD---DNTIKLWDATTGNLQKTLVGHSGLVQTVAFSPDGKQ 1037

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTW 397
            IA      +   +  + K     + L     S+ ++ +W
Sbjct: 1038 IASVS-DDKTIKVWDIAKSLKASQYLGHTFSSHFKSRSW 1075



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 72/215 (33%), Gaps = 22/215 (10%)

Query: 204 RYLTPSRDQILFEP--------RFSPNQQKVAYATYDDEDIL--RVYLMDTRIDRAPKRI 253
           R+L      +   P         FSP    V     D   +   +V  M+       + +
Sbjct: 540 RFLLRHYHTLTHWPLQVYSSAIVFSPESSVVKRENLDKIPVWLRKVPPMEDSWASLIQTL 599

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPD 312
                 +L   FS +G +   S   D  + ++  D  +   +  LT  L   ++  +SPD
Sbjct: 600 AGHSCPVLTVAFSPDGNQIA-SGSDDNTIKLW--DATTGDLQETLTGHLGRVLTVDFSPD 656

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             QI   SD    + + +  +   D ++             +SP G  IA          
Sbjct: 657 GKQIASGSD---DDTIKLWDAATGDLQKTLAGDSRGVVTVAFSPDGKQIASGSHDDT--- 710

Query: 373 IGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
           I +        +  + D  S++    +SP G+ + 
Sbjct: 711 IKLWDATTGDLQKTLADHLSSVCTIAFSPDGKQIA 745



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 56/160 (35%), Gaps = 11/160 (6%)

Query: 75   RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
             S +   ++     ++I +       + W++       TG + K          ++    
Sbjct: 896  HSGLVQTVAFSPDGKQIASGSLDDTIKLWDAT------TGDLQKTLAGHSSAVMKVAFSP 949

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSL 193
            D KQI       S     K+    + D+ +++        +       + + SG   N++
Sbjct: 950  DGKQIAS----GSEDDTIKLWDAATGDLQKTLAVHSSAVVTVAFSPDGKQIASGSDDNTI 1005

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             + D    N++        ++    FSP+ +++A  + D 
Sbjct: 1006 KLWDATTGNLQKTLVGHSGLVQTVAFSPDGKQIASVSDDK 1045


>gi|83815972|ref|YP_444562.1| hypothetical protein SRU_0417 [Salinibacter ruber DSM 13855]
 gi|83757366|gb|ABC45479.1| hypothetical protein SRU_0417 [Salinibacter ruber DSM 13855]
          Length = 982

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 86/235 (36%), Gaps = 11/235 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+  ++A  T          L            G   ++     +  +G+R   S +
Sbjct: 303 AYSPDTSRIAALTQHSPARPVRRLHVIDPSTGAVTRGAEGAIEPPVAWHPSGERIAFSRR 362

Query: 278 -----KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                     D++ VD       RLT+    +   ++ PD  ++ F +   G   +++  
Sbjct: 363 TRAAHGSLVDDVFVVDADGTDERRLTHGRRTSA-PTFGPDGDRLAFVATEGGTANVHLRA 421

Query: 333 SNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-S 390
                  R++  + +       W P  D +AF + S  +  + +   D      L +  +
Sbjct: 422 LKTGGTTRVTDYEGDVQITALRWHPTQDTLAFARVSEAERELVLYDLDTGASTALTDPAT 481

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQWVG 444
           + + P WSP G  L ++  +DG   + +Y +  +  R  T +   A   D  WV 
Sbjct: 482 DDRRPVWSPDGSQLAYTSLRDGVPNALVYDLSTHTHRRATHLVRGATVHD--WVP 534



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 85/234 (36%), Gaps = 18/234 (7%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS---------RILFVSESVV 185
           D  +I      S     R++ H I         G +G             RI F   +  
Sbjct: 307 DTSRIAALTQHSPARPVRRL-HVIDPSTGAVTRGAEGAIEPPVAWHPSGERIAFSRRTRA 365

Query: 186 S-GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           + G + + + V+D DG + R LT  R      P F P+  ++A+    +     V+L   
Sbjct: 366 AHGSLVDDVFVVDADGTDERRLTHGR--RTSAPTFGPDGDRLAFVA-TEGGTANVHLRAL 422

Query: 245 RIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +      R+ ++   +   A R+         +   +   ++   DL + A+  LT+   
Sbjct: 423 KTGG-TTRVTDYEGDVQITALRWHPTQDTLAFARVSEAERELVLYDLDTGASTALTDPAT 481

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            +    +SPD SQ+ + S R+G     V   +    +R +     +     W P
Sbjct: 482 DDRRPVWSPDGSQLAYTSLRDGVPNALVYDLSTHTHRRATHLVRGA-TVHDWVP 534



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G    R+ FV+    +  +        + G   R      D  +   R+ P Q  +A+A 
Sbjct: 399 GPDGDRLAFVATEGGTANVHLR---ALKTGGTTRVTDYEGDVQITALRWHPTQDTLAFAR 455

Query: 231 YDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
             + E  L +Y +DT        + +  +    P +S +G +   +  +D   +    DL
Sbjct: 456 VSEAERELVLYDLDTGAS---TALTDPATDDRRPVWSPDGSQLAYTSLRDGVPNALVYDL 512

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            ++   R T+ +       + P  S    ES R   E   V  +  S  +  +    A  
Sbjct: 513 STHTHRRATHLVRGATVHDWVPADSAFGAESSRAAPEGALVTSTALSKARDGAFRLPAHR 572

Query: 350 FDPVWSP 356
                +P
Sbjct: 573 TARSIAP 579


>gi|319652377|ref|ZP_08006493.1| hypothetical protein HMPREF1013_03106 [Bacillus sp. 2_A_57_CT2]
 gi|317395839|gb|EFV76561.1| hypothetical protein HMPREF1013_03106 [Bacillus sp. 2_A_57_CT2]
          Length = 623

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 50/334 (14%), Positives = 120/334 (35%), Gaps = 26/334 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
           ++ G    R+  R ++V    +        +    R +    S  ++  +          
Sbjct: 123 VQPGDTLYRLAIR-FNVMTNGEP-------NTEHIRFVNQLSSSQLFPGMKLRIPYAPPG 174

Query: 177 ILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
              +         +  + + + R G N++ LT         P +SPN +++A+       
Sbjct: 175 GQGLIAYTADRGGQYDIWLYNPRTGENVQ-LTSGLGDSFSSPEWSPNSRRIAFI----GK 229

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +Y++D       +             +S +  +   + Q      I   ++ S+  E
Sbjct: 230 NRIIYVVDVASGAIAQIDQMEEGAEFKLDWSPDSSQIAYTKQG----HIILYNVLSHQAE 285

Query: 296 RLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +  +   ++   + P   +++F++ D  G  QL+ +Q++GS +++I+++      +   
Sbjct: 286 SIQQSDSTDVQ--WFPSGRELLFQAPDESGISQLFRIQTDGSGKQQITRNTGGRLNNAQL 343

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDG 412
           SP G  + +T        I  ++        +          PTWSP   ++ +S     
Sbjct: 344 SPNGSFVLYTTPGVSISIIHTIELSTGNVVEVKGGPLAKNYYPTWSPDSLNIAYSATAFE 403

Query: 413 DTG--SKLYSIDLNGRNETLINTPAYASDP-QWV 443
           D G  S++ ++   G  + +       + P  W 
Sbjct: 404 DRGYFSQVRTVGRRGEEDRIWAISNCFASPVTWS 437



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 70/189 (37%), Gaps = 9/189 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ +++ +   D+  I +++ + T      +   N    +   + S NG   L +   
Sbjct: 297 WFPSGRELLFQAPDESGISQLFRIQTDGSGKQQITRNTGGRLNNAQLSPNGSFVLYTTPG 356

Query: 279 DEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFES----DREGKEQLYVMQS 333
                I++++L +     +       N   ++SPDS  I + +    DR    Q+  +  
Sbjct: 357 VSISIIHTIELSTGNVVEVKGGPLAKNYYPTWSPDSLNIAYSATAFEDRGYFSQVRTVGR 416

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDS 390
            G +  RI            WS  G  IA+     E+     +  +         L+   
Sbjct: 417 RGEED-RIWAISNCFASPVTWSTDGTKIAYLSGCKEQEFASEMWAIDLRHPVPIRLIAGV 475

Query: 391 NLQAPTWSP 399
           N+Q+  WSP
Sbjct: 476 NIQSLQWSP 484


>gi|220915253|ref|YP_002490557.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219953107|gb|ACL63491.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 674

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 87/246 (35%), Gaps = 33/246 (13%)

Query: 218 RFSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+   VAY     +   E ++    +      A +R+      + +P FS +G+R  
Sbjct: 33  AVSPDGASVAYTVATSSAGGEKLVSALHLVPAAGGAARRLTFGEERVTSPAFSPDGRRIA 92

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
               +      + +DLQ     R+T+         ++PD + +V  SD +         +
Sbjct: 93  FLSNRKGGTQAWVLDLQGGEARRVTDLPGGVSELRFTPDGAALVVASDVD--------PA 144

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV----MKKDGSQERLLVED 389
            G+D     +   A+   P  +   D + F  ++  +  +      +  DG     L   
Sbjct: 145 CGADAACNRKADAAAEVRPHLT---DRLLFRHWNEWRERVRTHLVRVPLDGGPAVDLTPG 201

Query: 390 SNLQAP---------TWSPSGRSLIFSRKKDG----DTGSKLYSIDLNGRNETLINT-PA 435
                P          +SP G++L +    D      T   +Y++ L G     + T P 
Sbjct: 202 DRDAPPVQRGSGDDLAFSPDGKTLYYVAVSDPVEATSTNGDVYAVPLAGGTPRRVTTAPG 261

Query: 436 YASDPQ 441
           +   P+
Sbjct: 262 WDGSPR 267



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 113/316 (35%), Gaps = 67/316 (21%)

Query: 176 RILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            + +   +  +G  K  ++L ++   G   R LT   +++   P FSP+ +++A+ + + 
Sbjct: 40  SVAYTVATSSAGGEKLVSALHLVPAAGGAARRLTFGEERVT-SPAFSPDGRRIAFLS-NR 97

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA------------ 281
           +   + +++D +     +R+ +    +   RF+ +G   +++   D A            
Sbjct: 98  KGGTQAWVLDLQ-GGEARRVTDLPGGVSELRFTPDGAALVVASDVDPACGADAACNRKAD 156

Query: 282 --------------------------MDIYSVDLQSNATERLTNT--------LFINISA 307
                                       +  V L       LT                 
Sbjct: 157 AAAEVRPHLTDRLLFRHWNEWRERVRTHLVRVPLDGGPAVDLTPGDRDAPPVQRGSGDDL 216

Query: 308 SYSPDSSQIVF--ESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           ++SPD   + +   SD          +Y +   G   +R++         P  SP G  +
Sbjct: 217 AFSPDGKTLYYVAVSDPVEATSTNGDVYAVPLAGGTPRRVTT-APGWDGSPRPSPDGKRL 275

Query: 362 AF-----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDT 414
           A+       +  ++F + V   DGS  R L    +  A    W+  G++L F+ + +G  
Sbjct: 276 AWLAQPRAGYEADRFHVMVAAADGSGARDLTAGFDRSAADLEWARGGKALRFTAESEG-- 333

Query: 415 GSKLYSIDLNGRNETL 430
              +Y +DL G+   L
Sbjct: 334 VHAVYEVDLAGKVTEL 349



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 12/153 (7%)

Query: 264 RFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            FS +GK        D         D+Y+V L      R+T     + S   SPD  ++ 
Sbjct: 217 AFSPDGKTLYYVAVSDPVEATSTNGDVYAVPLAGGTPRRVTTAPGWDGSPRPSPDGKRLA 276

Query: 318 FESD-REG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           + +  R G    +  + V  ++GS  + ++   + S  D  W+  G  + FT  S    A
Sbjct: 277 WLAQPRAGYEADRFHVMVAAADGSGARDLTAGFDRSAADLEWARGGKALRFTAESEGVHA 336

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +  +   G +   L    NL   +WS  G  L 
Sbjct: 337 VYEVDLAG-KVTELYRGRNLARVSWSRDGARLA 368



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 8/113 (7%)

Query: 306 SASYSPDSSQIVF---ESDREGK---EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            A+ SPD + + +    S   G+     L+++ + G   +R++  +E     P +SP G 
Sbjct: 31  DAAVSPDGASVAYTVATSSAGGEKLVSALHLVPAAGGAARRLTFGEER-VTSPAFSPDGR 89

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD 411
            IAF           V+   G + R + +    +    ++P G +L+ +   D
Sbjct: 90  RIAFLSNRKGGTQAWVLDLQGGEARRVTDLPGGVSELRFTPDGAALVVASDVD 142



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 87/300 (29%), Gaps = 39/300 (13%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           RV         + F      D   ++               +  +D   +     +    
Sbjct: 115 RVTDLPGGVSELRF----TPDGAALVVASDVDPACGADAACNRKADAAAE----VRPHLT 166

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP---------RFSPNQQK 225
            R+LF   +     ++  L  +  DG     LTP        P          FSP+ + 
Sbjct: 167 DRLLFRHWNEWRERVRTHLVRVPLDGGPAVDLTPG--DRDAPPVQRGSGDDLAFSPDGKT 224

Query: 226 VAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-- 279
           + Y    D         D          P+R+        +PR S +GKR     Q    
Sbjct: 225 LYYVAVSDPVEATSTNGDVYAVPLAGGTPRRVTTAPGWDGSPRPSPDGKRLAWLAQPRAG 284

Query: 280 ---EAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQS 333
              +   +       +    LT     + SA+   ++     + F ++ EG   +Y +  
Sbjct: 285 YEADRFHVMVAAADGSGARDLT--AGFDRSAADLEWARGGKALRFTAESEGVHAVYEVDL 342

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKD--GSQERLLVEDS 390
            G   +     +  +     WS  G  + A          + V++    G Q RLL    
Sbjct: 343 AGKVTEL---YRGRNLARVSWSRDGARLAALVDGLAAPPEVAVLEPGARGPQPRLLTGFG 399


>gi|294506310|ref|YP_003570368.1| hypothetical protein SRM_00495 [Salinibacter ruber M8]
 gi|294342638|emb|CBH23416.1| conserved hypothetical protein [Salinibacter ruber M8]
          Length = 992

 Score =  107 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 86/235 (36%), Gaps = 11/235 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+  ++A  T          L            G   ++     +  +G+R   S +
Sbjct: 313 AYSPDTSRIAALTQHSPARPVRRLHVIDPSTGAVTRGAEGAIEPPVAWHPSGERIAFSRR 372

Query: 278 -----KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                     D++ VD       RLT+    +   ++ PD  ++ F +   G   +++  
Sbjct: 373 TRAAHGSLVDDVFVVDADGTDERRLTHGRRTSA-PTFGPDGDRLAFVATEGGTANVHLRA 431

Query: 333 SNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-S 390
                  R++  + +       W P  D +AF + S  +  + +   D      L +  +
Sbjct: 432 LKTGGTTRVTDYEGDVQITALRWHPTQDTLAFARVSEAERELVLYDLDTGASTALTDPAT 491

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQWVG 444
           + + P WSP G  L ++  +DG   + +Y +  +  R  T +   A   D  WV 
Sbjct: 492 DDRRPVWSPDGSQLAYTSLRDGVPNAFVYDLSTHTHRRATHLVRGATVHD--WVP 544



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 78/221 (35%), Gaps = 12/221 (5%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYD 232
            SRI  +++   +  ++    +    GA    +T   +  +  P  + P+ +++A++   
Sbjct: 318 TSRIAALTQHSPARPVRRLHVIDPSTGA----VTRGAEGAIEPPVAWHPSGERIAFSRRT 373

Query: 233 ---DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                 ++    +        +R+ + R    AP F  +G R      +    +++   L
Sbjct: 374 RAAHGSLVDDVFVVDADGTDERRLTHGRR-TSAPTFGPDGDRLAFVATEGGTANVHLRAL 432

Query: 290 QSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           ++  T R+T+        +  + P    + F    E + +L +   +      ++ D   
Sbjct: 433 KTGGTTRVTDYEGDVQITALRWHPTQDTLAFARVSEAERELVLYDLDTGASTALT-DPAT 491

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               PVWSP G  +A+T          V        R    
Sbjct: 492 DDRRPVWSPDGSQLAYTSLRDGVPNAFVYDLSTHTHRRATH 532



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 86/234 (36%), Gaps = 18/234 (7%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS---------RILFVSESVV 185
           D  +I      S     R++ H I         G +G             RI F   +  
Sbjct: 317 DTSRIAALTQHSPARPVRRL-HVIDPSTGAVTRGAEGAIEPPVAWHPSGERIAFSRRTRA 375

Query: 186 S-GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           + G + + + V+D DG + R LT  R      P F P+  ++A+    +     V+L   
Sbjct: 376 AHGSLVDDVFVVDADGTDERRLTHGR--RTSAPTFGPDGDRLAFVA-TEGGTANVHLRAL 432

Query: 245 RIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +      R+ ++   +   A R+         +   +   ++   DL + A+  LT+   
Sbjct: 433 KTGG-TTRVTDYEGDVQITALRWHPTQDTLAFARVSEAERELVLYDLDTGASTALTDPAT 491

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            +    +SPD SQ+ + S R+G    +V   +    +R +     +     W P
Sbjct: 492 DDRRPVWSPDGSQLAYTSLRDGVPNAFVYDLSTHTHRRATHLVRGA-TVHDWVP 544



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 7/170 (4%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G    R+ FV+    +  +        + G   R      D  +   R+ P Q  +A+A 
Sbjct: 409 GPDGDRLAFVATEGGTANVHLR---ALKTGGTTRVTDYEGDVQITALRWHPTQDTLAFAR 465

Query: 231 YDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
             + E  L +Y +DT        + +  +    P +S +G +   +  +D   + +  DL
Sbjct: 466 VSEAERELVLYDLDTGAS---TALTDPATDDRRPVWSPDGSQLAYTSLRDGVPNAFVYDL 522

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            ++   R T+ +       + P  S    ES R   E   V  +  S  +
Sbjct: 523 STHTHRRATHLVRGATVHDWVPADSAFGAESSRAAPEGALVTSTALSKAR 572


>gi|153004922|ref|YP_001379247.1| WD40 domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152028495|gb|ABS26263.1| WD40 domain protein beta Propeller [Anaeromyxobacter sp. Fw109-5]
          Length = 1206

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 80/199 (40%), Gaps = 11/199 (5%)

Query: 187 GIIKNSLCVMD----RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL---RV 239
           G +     V D     D    R    +R +   +P  +P    +AY        L   R 
Sbjct: 400 GEVHREYRVYDDLHRVDLRTGRRTRLTRGERATDPDLAPGGAFLAYVQRTGPGALALVRR 459

Query: 240 YLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            L       A + + + R   +  PR S +G+R    +Q++   D+     +     R+T
Sbjct: 460 PLDAAGRLGAREVLFSRRGAEVYQPRVSPDGRRIAFELQEEGRRDLAL--WEDGRVTRIT 517

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +   ++ S +++PD   ++F SDR G   LY  ++   D  +++ + E     P  SP G
Sbjct: 518 DDGALDTSPAWTPDGRHLLFASDRGGLYNLYAWEAATGDVAQVT-NVETGALQPDVSPDG 576

Query: 359 DLIAFTKFSGEKFAIGVMK 377
             IAF  +S   + +  + 
Sbjct: 577 RTIAFLLYSRAGYDVATIP 595



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 51/319 (15%), Positives = 90/319 (28%), Gaps = 67/319 (21%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSP----NQQKVA-----YATYDDED 235
            G     L     DGA   Y+     Q   + P +        +  A     YA  +   
Sbjct: 255 GGRFMAYLQARYGDGAIAGYVGRQGAQLWPYAPSWVGRRFFGGRTFAQLWAEYADAERRR 314

Query: 236 ILRVYL-MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSNA 293
              V   +  R    P+R+         PR+S +G       +  D    +Y V      
Sbjct: 315 AEEVVAAVRARPVTRPRRLTTRGGRAENPRWSPDGTFLAYWRRPLDGRPALYRVSPDGRD 374

Query: 294 TERLTNTLFINI----------------------------------------------SA 307
              +T                                                       
Sbjct: 375 LGAVTTVDANGTLTLRSPDQAIAAIGEVHREYRVYDDLHRVDLRTGRRTRLTRGERATDP 434

Query: 308 SYSPDSSQIVFESDREGKEQLYVM----QSNG--SDQKRISQDKEASYFDPVWSPQGDLI 361
             +P  + + +   R G   L ++     + G    ++ +   + A  + P  SP G  I
Sbjct: 435 DLAPGGAFLAYV-QRTGPGALALVRRPLDAAGRLGAREVLFSRRGAEVYQPRVSPDGRRI 493

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           AF      +  + + + DG   R+  + +   +P W+P GR L+F+  + G      +  
Sbjct: 494 AFELQEEGRRDLALWE-DGRVTRITDDGALDTSPAWTPDGRHLLFASDRGGLYNLYAWEA 552

Query: 422 DLNGRNETLINTPAYASDP 440
              G    + N    A  P
Sbjct: 553 -ATGDVAQVTNVETGALQP 570



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 77/246 (31%), Gaps = 11/246 (4%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E   ++    F++        + +L  +  DG ++  +T          R SP+Q   A
Sbjct: 340 AENPRWSPDGTFLAYWRRPLDGRPALYRVSPDGRDLGAVTTVDANGTLTLR-SPDQAIAA 398

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS- 286
                 E  +   L    +    +           P  +  G       +          
Sbjct: 399 IGEVHREYRVYDDLHRVDLRTGRRTRLTRGERATDPDLAPGGAFLAYVQRTGPGALALVR 458

Query: 287 --VDLQS--NATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +D      A E L +     +     SPD  +I FE   EG+  L +         RI
Sbjct: 459 RPLDAAGRLGAREVLFSRRGAEVYQPRVSPDGRRIAFELQEEGRRDLALW--EDGRVTRI 516

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPS 400
           + D  A    P W+P G  + F    G  + +   +        +   ++    P  SP 
Sbjct: 517 TDDG-ALDTSPAWTPDGRHLLFASDRGGLYNLYAWEAATGDVAQVTNVETGALQPDVSPD 575

Query: 401 GRSLIF 406
           GR++ F
Sbjct: 576 GRTIAF 581


>gi|160890688|ref|ZP_02071691.1| hypothetical protein BACUNI_03133 [Bacteroides uniformis ATCC 8492]
 gi|156859687|gb|EDO53118.1| hypothetical protein BACUNI_03133 [Bacteroides uniformis ATCC 8492]
          Length = 1111

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 111/303 (36%), Gaps = 42/303 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ E G FN           +     ++ +       +RYL+ + D  L    +  +
Sbjct: 257 FYYLSEENGSFN-------IYRRTPGDAKAVQLTHYTKNPVRYLSAATDGRLC---YGFD 306

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +        +   + + ++  R D+   R             S +GK     ++ D   
Sbjct: 307 GEIYTLLPGGEAQKVNISIVSDRNDKDIIRQIKSSGATEM-AVSPDGKEVAFVLRGD--- 362

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   ++   T+++TNT     +  ++PD   +V+ S+R G  QLY       D+K  +
Sbjct: 363 -VYVTSVEYKTTKQITNTPCQERTVDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKLFT 421

Query: 343 Q----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                      + +A+ F P +SP G  IAF +       I V+       R +++    
Sbjct: 422 YATELKEERLTNSDAASFQPQYSPDGKEIAFLENRST---IRVINLKTKDVRTVMDGKYQ 478

Query: 393 QAPT-------WSPSGRSLIFSRKK---DGDTGSKLYSIDLNGRNE--TLINTPAYASDP 440
            + +       WSP  + ++         G     +  ++ +G+ E   L  +     + 
Sbjct: 479 YSYSDGDQWFQWSPDSKWIL--SDYIGVGGWNNKDVVLLNADGKGEMVNLTESGYNDGNA 536

Query: 441 QWV 443
           +WV
Sbjct: 537 KWV 539



 Score =  106 bits (265), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 84/252 (33%), Gaps = 37/252 (14%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------SSNGKRALI 274
           P  +      +      R+ +    +  A   +  F     AP +      S +G     
Sbjct: 10  PKGK---VVRFFYSPKTRIIMKKLLLGIAAACLAGFTFAQDAPLWMRHSVISPDGTTIAF 66

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           + + D    IY+V +      ++T     + +  +SPDS +I F SDR G   +Y++  +
Sbjct: 67  TYKGD----IYTVPVAGGRAMQITTNPAYDTAPVWSPDSKRIAFASDRMGSLDVYIVAKD 122

Query: 335 GSDQKRIS-----------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G + +R++            D     F     P  + + F   +G+   +  +  +G + 
Sbjct: 123 GGEPRRLTTHSGSETPLAFTDAGHVLFSAGIMPSAEAVVFPS-NGQFNQVYRVSVEGGRP 181

Query: 384 RLLVEDSNLQAPTWSPSGRSLI--------FSRKKD-GDTGSKLYSIDLNGRNE--TLIN 432
            ++     ++  + +  G  L         + RK         ++        +   L  
Sbjct: 182 TMISSMP-MECISINKEGAMLYQDKKGYEDYWRKHHVSPIARDIWMYTPGKEPQYRQLTT 240

Query: 433 TPAYASDPQWVG 444
                 +P W  
Sbjct: 241 FGGEDREPVWAP 252



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 76/229 (33%), Gaps = 37/229 (16%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +     SP+   +A+      DI  V +   R      +I    +   AP +S + KR 
Sbjct: 51  WMRHSVISPDGTTIAFTY--KGDIYTVPVAGGRAM----QITTNPAYDTAPVWSPDSKRI 104

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINI------------SASYSPDSSQIVFES 320
             +  +  ++D+Y V        RLT                   SA   P +  +VF S
Sbjct: 105 AFASDRMGSLDVYIVAKDGGEPRRLTTHSGSETPLAFTDAGHVLFSAGIMPSAEAVVFPS 164

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------- 371
           +     Q+Y +   G     IS            + +G ++   K   E +         
Sbjct: 165 N-GQFNQVYRVSVEGGRPTMISSMP---MECISINKEGAMLYQDKKGYEDYWRKHHVSPI 220

Query: 372 --AIGVMKKDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
              I +    G +    +L       + P W+P G++  +  +++G   
Sbjct: 221 ARDIWMYTP-GKEPQYRQLTTFGGEDREPVWAPDGKTFYYLSEENGSFN 268



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 51/398 (12%), Positives = 108/398 (27%), Gaps = 136/398 (34%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            ++    + ++   K  +  +   G     +T         P +SP+ +++A+A+     
Sbjct: 55  SVISPDGTTIAFTYKGDIYTVPVAGGRAMQITT-NPAYDTAPVWSPDSKRIAFASDRMGS 113

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMIL---------------------APRFSSNGKR--- 271
            L VY++  +    P+R+                             A  F SNG+    
Sbjct: 114 -LDVYIVA-KDGGEPRRLTTHSGSETPLAFTDAGHVLFSAGIMPSAEAVVFPSNGQFNQV 171

Query: 272 ALISVQKDEAMDIYSVDLQ---------------------------------------SN 292
             +SV+      I S+ ++                                         
Sbjct: 172 YRVSVEGGRPTMISSMPMECISINKEGAMLYQDKKGYEDYWRKHHVSPIARDIWMYTPGK 231

Query: 293 AT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-------- 342
                +LT     +    ++PD     + S+  G   +Y      +   +++        
Sbjct: 232 EPQYRQLTTFGGEDREPVWAPDGKTFYYLSEENGSFNIYRRTPGDAKAVQLTHYTKNPVR 291

Query: 343 -------------QDKEASYFDP--------------------------------VWSPQ 357
                         D E     P                                  SP 
Sbjct: 292 YLSAATDGRLCYGFDGEIYTLLPGGEAQKVNISIVSDRNDKDIIRQIKSSGATEMAVSPD 351

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG---- 412
           G  +AF         + V   +    + +       +   ++P GR+L+++ ++ G    
Sbjct: 352 GKEVAFVLRGD----VYVTSVEYKTTKQITNTPCQERTVDFAPDGRTLVYASERGGLWQL 407

Query: 413 ------DTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                     KL++     + E L N+ A +  PQ+  
Sbjct: 408 YTSTIVRKDEKLFTYATELKEERLTNSDAASFQPQYSP 445



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 50/123 (40%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F+P++SP+ +++A+        ++ +   D R     K   ++       ++
Sbjct: 431 LTNSDAASFQPQYSPDGKEIAFLENRSTIRVINLKTKDVRTVMDGKYQYSYSDGDQWFQW 490

Query: 266 SSNGKRAL---ISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K  L   I V      D+  ++         LT + + + +A +      +++ SD
Sbjct: 491 SPDSKWILSDYIGVGGWNNKDVVLLNADGKGEMVNLTESGYNDGNAKWVLGGKAMIWTSD 550

Query: 322 REG 324
           R G
Sbjct: 551 RAG 553


>gi|270295783|ref|ZP_06201983.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270273187|gb|EFA19049.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 1097

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 53/303 (17%), Positives = 111/303 (36%), Gaps = 42/303 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ E G FN           +     ++ +       +RYL+ + D  L    +  +
Sbjct: 243 FYYLSEENGSFN-------IYRRTPGDAKAVQLTHYTKNPVRYLSAATDGRLC---YGFD 292

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +        +   + + ++  R D+   R             S +GK     ++ D   
Sbjct: 293 GEIYTLLPGGEAQKVNISIVSDRNDKDIIRQIKSSGATEM-AVSPDGKEVAFVLRGD--- 348

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   ++   T+++TNT     +  ++PD   +V+ S+R G  QLY       D+K  +
Sbjct: 349 -VYVTSVEYKTTKQITNTPCQERTVDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKLFT 407

Query: 343 Q----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                      + +A+ F P +SP G  IAF +       I V+       R +++    
Sbjct: 408 YATELKEERLTNSDAASFQPQYSPDGKEIAFLENRST---IRVINLKTKDVRTVMDGKYQ 464

Query: 393 QAPT-------WSPSGRSLIFSRKK---DGDTGSKLYSIDLNGRNE--TLINTPAYASDP 440
            + +       WSP  + ++         G     +  ++ +G+ E   L  +     + 
Sbjct: 465 YSYSDGDQWFQWSPDSKWIL--SDYIGVGGWNNKDVVLLNADGKGEMVNLTESGYNDGNA 522

Query: 441 QWV 443
           +WV
Sbjct: 523 KWV 525



 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 82/244 (33%), Gaps = 34/244 (13%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------SSNGKRALISVQKDEAM 282
             +      R+ +    +  A   +  F     AP +      S +G     + + D   
Sbjct: 1   MRFFYSPKTRIIMKKLLLGIAAACLAGFTFAQDAPLWMRHSVISPDGTTIAFTYKGD--- 57

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            IY+V +      ++T     + +  +SPDS +I F SDR G   +Y++  +G + +R++
Sbjct: 58  -IYTVPVAGGRAMQITTNPAYDTAPVWSPDSKRIAFASDRMGSLDVYIVAKDGGEPRRLT 116

Query: 343 -----------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                       D     F     P  + + F   +G+   +  +  +G +  ++     
Sbjct: 117 THSGSETPLAFTDAGHVLFSAGIMPSAEAVVFPS-NGQFNQVYRVSVEGGRPTMISSMP- 174

Query: 392 LQAPTWSPSGRSLI--------FSRKKD-GDTGSKLYSIDLNGRNE--TLINTPAYASDP 440
           ++  + +  G  L         + RK         ++        +   L        +P
Sbjct: 175 MECISINKEGAMLYQDKKGYEDYWRKHHVSPIARDIWMYTPGKEPQYRQLTTFGGEDREP 234

Query: 441 QWVG 444
            W  
Sbjct: 235 VWAP 238



 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 76/229 (33%), Gaps = 37/229 (16%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +     SP+   +A+      DI  V +   R      +I    +   AP +S + KR 
Sbjct: 37  WMRHSVISPDGTTIAFTY--KGDIYTVPVAGGRAM----QITTNPAYDTAPVWSPDSKRI 90

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINI------------SASYSPDSSQIVFES 320
             +  +  ++D+Y V        RLT                   SA   P +  +VF S
Sbjct: 91  AFASDRMGSLDVYIVAKDGGEPRRLTTHSGSETPLAFTDAGHVLFSAGIMPSAEAVVFPS 150

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------- 371
           +     Q+Y +   G     IS            + +G ++   K   E +         
Sbjct: 151 N-GQFNQVYRVSVEGGRPTMISSMP---MECISINKEGAMLYQDKKGYEDYWRKHHVSPI 206

Query: 372 --AIGVMKKDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
              I +    G +    +L       + P W+P G++  +  +++G   
Sbjct: 207 ARDIWMYTP-GKEPQYRQLTTFGGEDREPVWAPDGKTFYYLSEENGSFN 254



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 51/398 (12%), Positives = 108/398 (27%), Gaps = 136/398 (34%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            ++    + ++   K  +  +   G     +T         P +SP+ +++A+A+     
Sbjct: 41  SVISPDGTTIAFTYKGDIYTVPVAGGRAMQITT-NPAYDTAPVWSPDSKRIAFASDRMGS 99

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMIL---------------------APRFSSNGKR--- 271
            L VY++  +    P+R+                             A  F SNG+    
Sbjct: 100 -LDVYIVA-KDGGEPRRLTTHSGSETPLAFTDAGHVLFSAGIMPSAEAVVFPSNGQFNQV 157

Query: 272 ALISVQKDEAMDIYSVDLQ---------------------------------------SN 292
             +SV+      I S+ ++                                         
Sbjct: 158 YRVSVEGGRPTMISSMPMECISINKEGAMLYQDKKGYEDYWRKHHVSPIARDIWMYTPGK 217

Query: 293 AT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-------- 342
                +LT     +    ++PD     + S+  G   +Y      +   +++        
Sbjct: 218 EPQYRQLTTFGGEDREPVWAPDGKTFYYLSEENGSFNIYRRTPGDAKAVQLTHYTKNPVR 277

Query: 343 -------------QDKEASYFDP--------------------------------VWSPQ 357
                         D E     P                                  SP 
Sbjct: 278 YLSAATDGRLCYGFDGEIYTLLPGGEAQKVNISIVSDRNDKDIIRQIKSSGATEMAVSPD 337

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG---- 412
           G  +AF         + V   +    + +       +   ++P GR+L+++ ++ G    
Sbjct: 338 GKEVAFVLRGD----VYVTSVEYKTTKQITNTPCQERTVDFAPDGRTLVYASERGGLWQL 393

Query: 413 ------DTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                     KL++     + E L N+ A +  PQ+  
Sbjct: 394 YTSTIVRKDEKLFTYATELKEERLTNSDAASFQPQYSP 431



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 50/123 (40%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F+P++SP+ +++A+        ++ +   D R     K   ++       ++
Sbjct: 417 LTNSDAASFQPQYSPDGKEIAFLENRSTIRVINLKTKDVRTVMDGKYQYSYSDGDQWFQW 476

Query: 266 SSNGKRAL---ISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K  L   I V      D+  ++         LT + + + +A +      +++ SD
Sbjct: 477 SPDSKWILSDYIGVGGWNNKDVVLLNADGKGEMVNLTESGYNDGNAKWVLGGKAMIWTSD 536

Query: 322 REG 324
           R G
Sbjct: 537 RAG 539


>gi|262197007|ref|YP_003268216.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262080354|gb|ACY16323.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1617

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 56/298 (18%), Positives = 105/298 (35%), Gaps = 39/298 (13%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            RV     D+     R+WD+  ++  +  +            H   D ++      +G+  
Sbjct: 1282 RVASSAWDQ---SVRVWDLAGQRPPVVLR-----------GHE--DAVFSVQFSAEGE-- 1323

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDD 233
                       +G     +  +  DGA  R     R   L      SP+ ++V     D 
Sbjct: 1324 ------RLVTAAGDSSARIWRLTDDGAGGRIERVLRHPTLVSSADISPDGRRVVTGATDH 1377

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V + D      P  +   R  + + RFS +G+R ++S   D    ++S D     
Sbjct: 1378 ----LVRIWDLDSGGPPLVLAGHRDRVASVRFSPDGER-VVSSALDNTARVWSAD-GGGE 1431

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                T       SAS+SPD  ++V  S       + +  ++GS + R+    +       
Sbjct: 1432 PLVFTEHDAWVWSASFSPDGERVVTASS---DHSVRIWNADGSGETRVLSGHDEVVSWAE 1488

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRK 409
            +SP GD +           + +   DGS+  +++    L      +SP G  ++ +  
Sbjct: 1489 FSPDGDRVVSASKDKT---LRIWPLDGSEPPVVLTGHALWVNTARFSPDGGRVVTASD 1543



 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 96/266 (36%), Gaps = 18/266 (6%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             V+S    NS  +   + ++                FSP+ ++VA + +D      V + 
Sbjct: 1240 RVLSASWDNSARIWSSEASDEPRRLEGHSMAPTMASFSPDGRRVASSAWDQ----SVRVW 1295

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNT 300
            D    R P  +      + + +FS+ G+R + +   D +  I+ +  D      ER+   
Sbjct: 1296 DLAGQRPPVVLRGHEDAVFSVQFSAEGERLV-TAAGDSSARIWRLTDDGAGGRIERVLRH 1354

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              +  SA  SPD  ++V          + +   +      +            +SP G+ 
Sbjct: 1355 PTLVSSADISPDGRRVV---TGATDHLVRIWDLDSGGPPLVLAGHRDRVASVRFSPDGER 1411

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +  +          V   DG  E L+    D+ + + ++SP G  ++ +     D   ++
Sbjct: 1412 VVSSALDNTA---RVWSADGGGEPLVFTEHDAWVWSASFSPDGERVVTASS---DHSVRI 1465

Query: 419  YSIDLNGRNETLINTPAYASDPQWVG 444
            ++ D +G    L       S  ++  
Sbjct: 1466 WNADGSGETRVLSGHDEVVSWAEFSP 1491



 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 100/266 (37%), Gaps = 16/266 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              V S     S+ V D  G     +    +  +F  +FS   +++  A  D    +   L
Sbjct: 1281 RRVASSAWDQSVRVWDLAGQRPPVVLRGHEDAVFSVQFSAEGERLVTAAGDSSARIWR-L 1339

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D       +R+    +++ +   S +G+R +++   D  + I+ +D        L    
Sbjct: 1340 TDDGAGGRIERVLRHPTLVSSADISPDGRR-VVTGATDHLVRIWDLD-SGGPPLVLAGHR 1397

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S  +SPD  ++V            V  ++G  +  +  + +A  +   +SP G+ +
Sbjct: 1398 DRVASVRFSPDGERVV---SSALDNTARVWSADGGGEPLVFTEHDAWVWSASFSPDGERV 1454

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW---SPSGRSLIFSRKKDGDTGSKL 418
                      ++ +   DGS E  ++   + +  +W   SP G  ++ + K   D   ++
Sbjct: 1455 VTASSD---HSVRIWNADGSGETRVL-SGHDEVVSWAEFSPDGDRVVSASK---DKTLRI 1507

Query: 419  YSIDLNGRNETLINTPAYASDPQWVG 444
            + +D +     L     + +  ++  
Sbjct: 1508 WPLDGSEPPVVLTGHALWVNTARFSP 1533



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 52/316 (16%), Positives = 121/316 (38%), Gaps = 30/316 (9%)

Query: 147  SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIR 204
             P + ++    +   +   +  E GD      F  +   V S     ++ +   DG+   
Sbjct: 933  PPGAVQEARRLLYAKLAHVVFTEHGDGVQSAAFSPDGERVASASWDGTVRIWPADGSGAA 992

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---IL 261
             +    +  ++   F  + Q++  A+ D        + DTR     + +   R     + 
Sbjct: 993  LVLRGHEAEVYGAEFRADGQRLVSASGDH----TARIWDTRPGSQGQVLRVLRGHREAVW 1048

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            +  FS +GKR +++   D  + I+ +     A   L        SA++SPD  ++V  S 
Sbjct: 1049 SAAFSPDGKR-VVTASGDHTVRIWPL-AGDAAPAVLEGHRATVRSAAFSPDGGRVVSAS- 1105

Query: 322  REGKEQLYVMQSNGSD------------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             +G  +++ + ++ S               R+ +   A  +   +SP G  +       +
Sbjct: 1106 ADGTVRVWALGADASPDAAAGPGSAASRAVRVFETGPAPVWMARFSPDGTRVI-AALGDD 1164

Query: 370  KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               I  +   G++ ++L   +++  A  +SP G  ++ +    GD   +++++  +    
Sbjct: 1165 TARIWDL-ASGAEIQVLRGHTDMVHAAAFSPEGERVVTAS---GDNTVRIWTLASDAAPL 1220

Query: 429  TLINTPAYASDPQWVG 444
             L    A  +D ++  
Sbjct: 1221 VLSGHGARIADARFSP 1236



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 22/52 (42%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            + VVS     +L +   DG+    +       +   RFSP+  +V  A+ D 
Sbjct: 1494 DRVVSASKDKTLRIWPLDGSEPPVVLTGHALWVNTARFSPDGGRVVTASDDK 1545


>gi|85708707|ref|ZP_01039773.1| hypothetical protein NAP1_05690 [Erythrobacter sp. NAP1]
 gi|85690241|gb|EAQ30244.1| hypothetical protein NAP1_05690 [Erythrobacter sp. NAP1]
          Length = 678

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 96/286 (33%), Gaps = 59/286 (20%)

Query: 216 EPRFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +P+ SP+  +  Y         D     V+++D         + +      +PR+S +G 
Sbjct: 37  DPQVSPDGSQAIYVRRFNDIMTDRTRSHVWIVDLDGSAHEPLLADG-GSYRSPRWSPDGS 95

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----------- 319
           R      ++    +Y   L S  +  + +      S ++SPD + I F            
Sbjct: 96  RIAYMTSENGRTALYVHYLASGRSALIGSFERGPSSITWSPDGTMIAFAMSVEAKSDKLL 155

Query: 320 ---SDREGKE--------------------------QLYVMQSNGSDQKRISQDKEASYF 350
              S  EG                             ++V+ + G  Q++++        
Sbjct: 156 SPPSRPEGANWAKAPVVIDRARYRTNGAGFVELAYDHIFVIPAEGGTQRQLTSGDFNHGG 215

Query: 351 DPVWSPQGDLIAFTKFSGEKFAI-------GVMKKDGSQERLLVE-DSNLQAPTWSPSGR 402
              ++P G+ I F+    E + +         +     +   L E      +P  SP G 
Sbjct: 216 PLSFTPDGEQIIFSANRNEGWELQSREADVFSVSVSSGELTQLTEMPGTETSPQVSPDGG 275

Query: 403 SLIFSRK---KDGDTGSKLYSIDLNGRNETLIN--TPAYASDPQWV 443
           S+ F      ++    + ++ ++++G N   +       A D QW+
Sbjct: 276 SIAFLGTGNAREPFLPTNVFVMNVDGGNARNLTEGLDRRAGDVQWL 321



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 90/301 (29%), Gaps = 84/301 (27%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +            DG+ I Y+T            S N +   Y  Y              
Sbjct: 80  ADGGSYRSPRWSPDGSRIAYMT------------SENGRTALYVHY-------------L 114

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---------------------- 283
                  IG+F     +  +S +G     ++  +   D                      
Sbjct: 115 ASGRSALIGSFERGPSSITWSPDGTMIAFAMSVEAKSDKLLSPPSRPEGANWAKAPVVID 174

Query: 284 ------------------IYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREG 324
                             I+ +  +     +LT+  F +    S++PD  QI+F ++R  
Sbjct: 175 RARYRTNGAGFVELAYDHIFVIPAEGGTQRQLTSGDFNHGGPLSFTPDGEQIIFSANRNE 234

Query: 325 KEQL-------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-----FA 372
             +L       + +  +  +  +++ +   +   P  SP G  IAF      +       
Sbjct: 235 GWELQSREADVFSVSVSSGELTQLT-EMPGTETSPQVSPDGGSIAFLGTGNAREPFLPTN 293

Query: 373 IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           + VM  DG   R L E  D       W  S   + F+ +  G+    +  +D  G   T 
Sbjct: 294 VFVMNVDGGNARNLTEGLDRRAGDVQWL-SSSEIAFTFQNRGEN--NIGVVDTRGNRRTA 350

Query: 431 I 431
           +
Sbjct: 351 V 351



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 88/261 (33%), Gaps = 57/261 (21%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           SRI +++    S   + +L V     +    L  S ++      +SP+   +A+A   + 
Sbjct: 95  SRIAYMT----SENGRTALYV-HYLASGRSALIGSFERGPSSITWSPDGTMIAFAMSVEA 149

Query: 235 D--------------------------------------ILRVYLMDTRIDRAPKRIGNF 256
                                                        +        +++ + 
Sbjct: 150 KSDKLLSPPSRPEGANWAKAPVVIDRARYRTNGAGFVELAYDHIFVIPAEGGTQRQLTSG 209

Query: 257 RSMILAP-RFSSNGKRALISVQKDEAM-------DIYSVDLQSNATERLTNTLFINISAS 308
                 P  F+ +G++ + S  ++E         D++SV + S    +LT       S  
Sbjct: 210 DFNHGGPLSFTPDGEQIIFSANRNEGWELQSREADVFSVSVSSGELTQLTEMPGTETSPQ 269

Query: 309 YSPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            SPD   I F      +E      ++VM  +G + + +++  +    D  W    + IAF
Sbjct: 270 VSPDGGSIAFLGTGNAREPFLPTNVFVMNVDGGNARNLTEGLDRRAGDVQWLSSSE-IAF 328

Query: 364 TKFSGEKFAIGVMKKDGSQER 384
           T  +  +  IGV+   G++  
Sbjct: 329 TFQNRGENNIGVVDTRGNRRT 349



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 14/124 (11%)

Query: 305 ISASYSPDSSQIVFES-------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                SPD SQ ++         DR  +  ++++  +GS  + +  D   SY  P WSP 
Sbjct: 36  DDPQVSPDGSQAIYVRRFNDIMTDRT-RSHVWIVDLDGSAHEPLLADG-GSYRSPRWSPD 93

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDT 414
           G  IA+      + A+ V      +  L+   S  + P+   WSP G  + F+   +  +
Sbjct: 94  GSRIAYMTSENGRTALYVHYLASGRSALI--GSFERGPSSITWSPDGTMIAFAMSVEAKS 151

Query: 415 GSKL 418
              L
Sbjct: 152 DKLL 155



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 56/173 (32%), Gaps = 10/173 (5%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV-----YLMDTRID 247
           + V+  +G   R LT           F+P+ +++ ++   +E              +   
Sbjct: 193 IFVIPAEGGTQRQLTSGDFNHGGPLSFTPDGEQIIFSANRNEGWELQSREADVFSVSVSS 252

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-----MDIYSVDLQSNATERLTNTLF 302
               ++        +P+ S +G         +        +++ +++       LT  L 
Sbjct: 253 GELTQLTEMPGTETSPQVSPDGGSIAFLGTGNAREPFLPTNVFVMNVDGGNARNLTEGLD 312

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                     SS+I F     G+  + V+ + G+ +  +      +   P  S
Sbjct: 313 RRAGDVQWLSSSEIAFTFQNRGENNIGVVDTRGNRRTAVEGIGGTTIGRPYVS 365



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 5/57 (8%)

Query: 393 QAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
             P  SP G   I+ R+ +      T S ++ +DL+G  +E L+        P+W  
Sbjct: 36  DDPQVSPDGSQAIYVRRFNDIMTDRTRSHVWIVDLDGSAHEPLLADGGSYRSPRWSP 92


>gi|255746124|ref|ZP_05420071.1| protease-related protein [Vibrio cholera CIRS 101]
 gi|262158611|ref|ZP_06029725.1| protease-related protein [Vibrio cholerae INDRE 91/1]
 gi|262168976|ref|ZP_06036670.1| protease-related protein [Vibrio cholerae RC27]
 gi|255735878|gb|EET91276.1| protease-related protein [Vibrio cholera CIRS 101]
 gi|262022675|gb|EEY41382.1| protease-related protein [Vibrio cholerae RC27]
 gi|262029491|gb|EEY48141.1| protease-related protein [Vibrio cholerae INDRE 91/1]
          Length = 1039

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 78/239 (32%), Gaps = 37/239 (15%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ QK+A+             +          +         P +S + +    +  + 
Sbjct: 2   SPDGQKIAFTYAGQ------IWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRY 55

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------------- 326
              D++ + +Q   + RLT     +I  ++S D  Q+ F S R G +             
Sbjct: 56  GLGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFMA 115

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF------------SGEKFAIG 374
           QLY + + G  ++R+      +  D   SP    I +T              S     I 
Sbjct: 116 QLYSVPAAGGREQRVL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIW 172

Query: 375 -VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                 G   ++       + P WS  G S+ +  ++ G     ++    +G     I 
Sbjct: 173 QWSPLTGKHTQITTFRGEDRNPVWSADGSSMYYLSEQAGSF--NVWQQRFDGSEPVQIT 229



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 72/203 (35%), Gaps = 30/203 (14%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G++   +     A  I+ V  Q      LT +   + +  +SPDS  I F +DR G 
Sbjct: 2   SPDGQKIAFTY----AGQIWLVPAQGGDAVALTESGVYSETPIWSPDSQSIAFTADRYGL 57

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-------------A 372
             ++++   G + +R++    A      +S  G  + F+                     
Sbjct: 58  GDVFILSIQGGESRRLTYHG-AKDIPYAFSADGQQLYFSSRRLGDDKANANVKQGSFMAQ 116

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSID 422
           +  +   G +E+ ++    +     SPS   ++++ +             D    ++   
Sbjct: 117 LYSVPAAGGREQRVL-PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQWS 175

Query: 423 -LNGRNETLINTPAYASDPQWVG 444
            L G++  +        +P W  
Sbjct: 176 PLTGKHTQITTFRGEDRNPVWSA 198



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/331 (12%), Positives = 98/331 (29%), Gaps = 89/331 (26%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRID 247
           G + R        I +   FS + Q++ +++    D            + ++Y +     
Sbjct: 68  GESRRLTYHGAKDIPY--AFSADGQQLYFSSRRLGDDKANANVKQGSFMAQLYSVPAAGG 125

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIYSVDLQSNATE 295
           R  + +      I     S +    L + Q             D   DI+     +    
Sbjct: 126 REQRVL---PIAISDLAISPSHSDILYTNQPSDEQPWRKGALSDATRDIWQWSPLTGKHT 182

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------------ 343
           ++T     + +  +S D S + + S++ G   ++  + +GS+  +I+             
Sbjct: 183 QITTFRGEDRNPVWSADGSSMYYLSEQAGSFNVWQQRFDGSEPVQITDHQKLPVRFLSAS 242

Query: 344 ---DKEASYFDPVW--------------------SPQGDLIAFTKFSGEKF--------- 371
              D    +   +W                     P G           +          
Sbjct: 243 LQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRRSAMPDGRHNVNFNLEATEMVVAPNAAEV 302

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT---------G 415
                  + V+       + + +    +   ++S  G  LI++ +++G           G
Sbjct: 303 AIVARGDVYVVSLLSGLTQRITDTPEAERDVSFSSDGYRLIYASEREGSWNLYQSYVNDG 362

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            K +S  L+   E ++ T      P +   +
Sbjct: 363 GKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 393



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 30/226 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 296 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDVSFSSDGYRLIYASERE 349

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y   +                  LT    + I   YSP+  +IV+   RE +  L
Sbjct: 350 GSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDV-IQPLYSPNLKRIVY---RENRNTL 405

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + I     +     I ++K DGS+ 
Sbjct: 406 KVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVTRDRAMSNGDIQLLKFDGSEA 465

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNG 425
            + L +    + AP +S  G+ + +     G  D    +   D+ G
Sbjct: 466 PINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDMVVQYDVYG 511



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 99/286 (34%), Gaps = 41/286 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------KVAYATYDDEDILRVYLMDTR 245
           +     DG+    +T  +   +     S           ++       +   +V +   R
Sbjct: 215 VWQQRFDGSEPVQITDHQKLPVRFLSASLQGDLAYGFDGEIWRLKAGAKQAEKVPVSIRR 274

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +   NF         + N     I  + D    +Y V L S  T+R+T+T    
Sbjct: 275 SAMPDGRHNVNFNLEATEMVVAPNAAEVAIVARGD----VYVVSLLSGLTQRITDTPEAE 330

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----------DQKRISQDKEASYFDPV 353
              S+S D  ++++ S+REG   LY    N             ++  ++ +++     P+
Sbjct: 331 RDVSFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQD--VIQPL 388

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIF 406
           +SP    I + +       + V   +  +   L++   L +         WSP    ++ 
Sbjct: 389 YSPNLKRIVYRENRNT---LKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIVT 445

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGFM 446
             +   +   +L   D +     L  +      P +++D QWV ++
Sbjct: 446 RDRAMSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWL 491



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 70/174 (40%), Gaps = 19/174 (10%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+  +   ++ + Y+ D        +D   + +      ++ P +S N 
Sbjct: 334 SFSSDGYRLIYASEREGSWNLYQSYVNDGGKSFSSSLDIIEEPVLTTEQDVIQPLYSPNL 393

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR +    ++    +   D++ + T  L +   +      ++S  +SPDS  IV   DR 
Sbjct: 394 KRIVY---RENRNTLKVYDIEQDKTYTLLDAHALYSYFDKDLSYQWSPDSEYIV-TRDRA 449

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                + +++ +GS+          S F P +S  G  + +   +     I  M
Sbjct: 450 MSNGDIQLLKFDGSEAPINLSQSGFSEFAPQFSADGQWVYWLTDAKGLRDIDDM 503


>gi|288928608|ref|ZP_06422454.1| MdsD protein [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329592|gb|EFC68177.1| MdsD protein [Prevotella sp. oral taxon 317 str. F0108]
          Length = 1077

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 59/303 (19%), Positives = 114/303 (37%), Gaps = 38/303 (12%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           D +  ++ E G FN   ++V     +G  + +    +     +R+LT + +  L    + 
Sbjct: 225 DTFYYLSEEDGTFN---VYVRNIDGTGKQQLTRHTTNP----VRFLTAANNGTLC---YG 274

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + +       +    L+V ++  +ID    R   F         S +GK     +  D 
Sbjct: 275 YDGEIYTLKQGEQPQKLKVNIVTDKIDTDLDRQTLFTGATEI-ALSPDGKELAFVLHGD- 332

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              +Y        T+++T+T        ++PD   IV+ S+R G  Q+Y  +     +K 
Sbjct: 333 ---VYVTSNNYRTTKQITDTPEQEREIQFAPDGRSIVYASERGGLWQIYRTKLKLDKEKS 389

Query: 341 ISQDK----------EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +             + +   P +SP G  IAF +       + V+       R +++  
Sbjct: 390 FAYATQLEEEQLVKSDRTSQQPRFSPDGKSIAFFEDRST---LRVLDIKSKAVRTVMDGK 446

Query: 391 NLQAPT-------WSPSGRSLIFSR-KKDGDTGSKLYSIDLNGRNETLINTPAYASD--P 440
            + + +       WSP  R L+ S     G     +  +  +G+ E    T +  SD  P
Sbjct: 447 YVYSYSDGDISFAWSPDSRWLLSSYIGVGGWNSPDVALVKADGKGEIHNLTQSGYSDVGP 506

Query: 441 QWV 443
           +WV
Sbjct: 507 RWV 509



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 75/230 (32%), Gaps = 34/230 (14%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +M T +      +    S   +P +      S +G     + + D    IY+V       
Sbjct: 1   MMKTTLTIVALALATSVSAQESPLWMRYCAISPDGSAVAFTYKGD----IYTVPTTGGTA 56

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ----------- 343
            +LT     +    +SPDS Q+ F S+REG   +YVMQ  G   +R++            
Sbjct: 57  RQLTTNAAYDTHPVWSPDSKQLAFCSNREGSMDVYVMQREGGTPRRLTTNSNSETPIAFK 116

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
           D     +     P    I F         +  +  +GS+  L      +   +  P+G  
Sbjct: 117 DNNTVLYTSSIIPSAKSIIFANR--MLPQVYEVGTNGSRPHLFSALPMMDI-SIRPNGDL 173

Query: 404 LI---------FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           L          + +         ++ +   G+   L N       P W  
Sbjct: 174 LYHDQKGYEDPWRKHHRSPITRDIW-LRRGGKYTKLTNFNGEDRTPVWAA 222



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/394 (11%), Positives = 110/394 (27%), Gaps = 136/394 (34%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    S V+   K  +  +   G   R LT         P +SP+ +++A+ +  +   +
Sbjct: 31  ISPDGSAVAFTYKGDIYTVPTTGGTARQLTT-NAAYDTHPVWSPDSKQLAFCSNREGS-M 88

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFS------------SNGKRALIS---------- 275
            VY+M  R    P+R+    +      F              + K  + +          
Sbjct: 89  DVYVMQ-REGGTPRRLTTNSNSETPIAFKDNNTVLYTSSIIPSAKSIIFANRMLPQVYEV 147

Query: 276 ----VQKDEAMDIYSVDLQ-----------------------------------SNATER 296
                +      +  +D+                                         +
Sbjct: 148 GTNGSRPHLFSALPMMDISIRPNGDLLYHDQKGYEDPWRKHHRSPITRDIWLRRGGKYTK 207

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK----------- 345
           LTN    + +  ++       + S+ +G   +YV   +G+ ++++++             
Sbjct: 208 LTNFNGEDRTPVWAAQGDTFYYLSEEDGTFNVYVRNIDGTGKQQLTRHTTNPVRFLTAAN 267

Query: 346 ------------------------------------------EASYFDPVWSPQGDLIAF 363
                                                          +   SP G  +AF
Sbjct: 268 NGTLCYGYDGEIYTLKQGEQPQKLKVNIVTDKIDTDLDRQTLFTGATEIALSPDGKELAF 327

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYS-- 420
                    + V   +    + + +    +    ++P GRS++++ ++ G    ++Y   
Sbjct: 328 VLHGD----VYVTSNNYRTTKQITDTPEQEREIQFAPDGRSIVYASERGGLW--QIYRTK 381

Query: 421 IDLNGRN----------ETLINTPAYASDPQWVG 444
           + L+             E L+ +   +  P++  
Sbjct: 382 LKLDKEKSFAYATQLEEEQLVKSDRTSQQPRFSP 415



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 55/349 (15%), Positives = 127/349 (36%), Gaps = 66/349 (18%)

Query: 69  VSKD--LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           +++D  L+R   +          K+TN +   R   W + G         + E      V
Sbjct: 193 ITRDIWLRRGGKYT---------KLTNFNGEDRTPVWAAQGDTFY----YLSEEDGTFNV 239

Query: 127 EFRLWDVKDRKQIIGKK----FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
             R  D   ++Q+         F + A+   + +    +IY    GE+     ++  V++
Sbjct: 240 YVRNIDGTGKQQLTRHTTNPVRFLTAANNGTLCYGYDGEIYTLKQGEQPQ-KLKVNIVTD 298

Query: 183 SVVSGIIKNSLCV------MDRDGANIRYLTPS-----------RDQILFEP------RF 219
            + + + + +L        +  DG  + ++                QI   P      +F
Sbjct: 299 KIDTDLDRQTLFTGATEIALSPDGKELAFVLHGDVYVTSNNYRTTKQITDTPEQEREIQF 358

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRA----------PKRIGNFRSMILAPRFSSNG 269
           +P+ + + YA+ +   + ++Y    ++D+            +++         PRFS +G
Sbjct: 359 APDGRSIVYAS-ERGGLWQIYRTKLKLDKEKSFAYATQLEEEQLVKSDRTSQQPRFSPDG 417

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           K        ++   +  +D++S A   + +  ++      +IS ++SPDS  ++      
Sbjct: 418 KSIAFF---EDRSTLRVLDIKSKAVRTVMDGKYVYSYSDGDISFAWSPDSRWLLSSYIGV 474

Query: 324 GK---EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           G      + +++++G  +         S   P W   G  + F+     
Sbjct: 475 GGWNSPDVALVKADGKGEIHNLTQSGYSDVGPRWVLGGKAMLFSSDRAG 523


>gi|126652129|ref|ZP_01724311.1| hypothetical protein BB14905_10675 [Bacillus sp. B14905]
 gi|126591037|gb|EAZ85148.1| hypothetical protein BB14905_10675 [Bacillus sp. B14905]
          Length = 701

 Score =  106 bits (265), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 96/256 (37%), Gaps = 26/256 (10%)

Query: 212 QILFEPRFSPNQQKVAY--ATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSN 268
           +    P  SP+ Q+V Y       E+    +L  + ++   +R+  +  +  + P +S +
Sbjct: 14  EWPSNPVISPDGQQVVYERTIAVKENNYETHLYLSDVEGKTRRVLTSSGTRNVNPIWSPD 73

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------FESDR 322
           GK       +   M  + + L       LT       S  ++P+   I         S+ 
Sbjct: 74  GKTIAFISDRAYGMQAWLLSLDGGEARCLTKFRQGISSIVWAPNGKTIYGLVPVIVHSEL 133

Query: 323 EG---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           E       ++  +S    + ++ +D    Y    +   G           K  I  +  D
Sbjct: 134 ETFHENATIHEAKSEKEQEDKLWRDGAKRYHHLYYKNDGTGF----HKPYKRQIVAIHID 189

Query: 380 GSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGD---TGSKLYSIDLNGRNETLI---- 431
                L+ +  N +  P  SP G  ++FS   + +    G K+Y +  +G +  L+    
Sbjct: 190 TGTFVLITKGINEVHQPDVSPDGEYIVFSSNAENENFLFGGKVYRVSSSGGDAKLLYSDT 249

Query: 432 --NTPAYASDPQWVGF 445
             ++P+Y+ D +W+ F
Sbjct: 250 EASSPSYSPDGKWIAF 265



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 62/337 (18%), Positives = 111/337 (32%), Gaps = 76/337 (22%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              D    +   + +V     +  L + D +G   R +  S       P +SP+ + +A+
Sbjct: 21  ISPDGQQVVYERTIAVKENNYETHLYLSDVEGK-TRRVLTSSGTRNVNPIWSPDGKTIAF 79

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-----LIS-------- 275
            + D    ++ +L+        + +  FR  I +  ++ NGK       +I         
Sbjct: 80  IS-DRAYGMQAWLLSLD-GGEARCLTKFRQGISSIVWAPNGKTIYGLVPVIVHSELETFH 137

Query: 276 -----------------VQKDEA--------------------MDIYSVDLQSNATERLT 298
                            + +D A                      I ++ + +     +T
Sbjct: 138 ENATIHEAKSEKEQEDKLWRDGAKRYHHLYYKNDGTGFHKPYKRQIVAIHIDTGTFVLIT 197

Query: 299 NTLFINISASYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             +        SPD   IVF S+ E        ++Y + S+G D K +  D EAS   P 
Sbjct: 198 KGINEVHQPDVSPDGEYIVFSSNAENENFLFGGKVYRVSSSGGDAKLLYSDTEAS--SPS 255

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ----------------APTW 397
           +SP G  IAF     E+  + V+  +G   R L +                      P W
Sbjct: 256 YSPDGKWIAFFGNHAEQKELLVIPSEGGDVRSLSKKYQDTLLDMTFTDMRNLRYALRPQW 315

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           S + R +      +G      +S D N  +  +I   
Sbjct: 316 SNNSRYIYALSTHEGRNEIVRFSNDKNDDHPVIIAGG 352



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 81/235 (34%), Gaps = 29/235 (12%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED--ILRVY 240
           +      K  +  +  D      +T   +++  +P  SP+ + + +++  + +  +    
Sbjct: 173 TGFHKPYKRQIVAIHIDTGTFVLITKGINEV-HQPDVSPDGEYIVFSSNAENENFLFGGK 231

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-- 298
           +          ++    +   +P +S +GK         E  ++  +  +      L+  
Sbjct: 232 VYRVSSSGGDAKLLYSDTEASSPSYSPDGKWIAFFGNHAEQKELLVIPSEGGDVRSLSKK 291

Query: 299 -------------NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQD 344
                          L   +   +S +S  I   S  EG+ ++    ++ + D   I   
Sbjct: 292 YQDTLLDMTFTDMRNLRYALRPQWSNNSRYIYALSTHEGRNEIVRFSNDKNDDHPVIIAG 351

Query: 345 KEASYFDPVWSPQGD---LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            + + F   +S  G+    +A++  +     I  ++ D +       D N + PT
Sbjct: 352 GDRTIF--HFSFDGEETISMAYSTVNHPG-RISAIRIDETN----TADCNYRYPT 399


>gi|168704723|ref|ZP_02737000.1| putative exported protease [Gemmata obscuriglobus UQM 2246]
          Length = 1080

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 80/243 (32%), Gaps = 38/243 (15%)

Query: 221 PNQQKVA-YATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P++ ++  +     + I+  Y  D           +RI +     + PRFS +G     +
Sbjct: 23  PDEARLLRFPAVHGDQIVFTYAGDLYTVPAAGGTARRITSHPGFEMFPRFSPDGSLVAFT 82

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTL-------FINISAS-----YSPDSSQIVFESDRE 323
            Q D   +++ V       +RLT T           +  +     ++PD   ++F S   
Sbjct: 83  GQYDGNTEVFVVPAVGGEPKRLTYTATLGRDEVSDRMGPNNVVIGWTPDGKSVLFRSRMR 142

Query: 324 GKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----------FSG 368
                  QL+ +   G   + +   +        +S  G  +A+ +             G
Sbjct: 143 SFNDFVGQLFTVPVEGGVPEELPLPRGGFA---SYSADGTKLAYNRIFREFRTWKRYRGG 199

Query: 369 EKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               + +      +   L +D      P +   G  + F   +D +    LYS+D   + 
Sbjct: 200 MADDVWLYDFATKKTEQLTDDPGQDIFPMFI--GDKVYFISDRDKNMRYNLYSVDPATKK 257

Query: 428 ETL 430
              
Sbjct: 258 TER 260



 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 72/201 (35%), Gaps = 30/201 (14%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G + + +   D    +Y+V        R+T+     +   +SPD S + F    +G  ++
Sbjct: 36  GDQIVFTYAGD----LYTVPAAGGTARRITSHPGFEMFPRFSPDGSLVAFTGQYDGNTEV 91

Query: 329 YVMQSNGSDQKRISQDK-----------EASYFDPVWSPQGDLIAF----TKFSGEKFAI 373
           +V+ + G + KR++                +     W+P G  + F      F+     +
Sbjct: 92  FVVPAVGGEPKRLTYTATLGRDEVSDRMGPNNVVIGWTPDGKSVLFRSRMRSFNDFVGQL 151

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSID-L 423
             +  +G     L       A ++S  G  L ++R         +  G     ++  D  
Sbjct: 152 FTVPVEGGVPEELPLPRGGFA-SYSADGTKLAYNRIFREFRTWKRYRGGMADDVWLYDFA 210

Query: 424 NGRNETLINTPAYASDPQWVG 444
             + E L + P     P ++G
Sbjct: 211 TKKTEQLTDDPGQDIFPMFIG 231



 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 58/353 (16%), Positives = 120/353 (33%), Gaps = 88/353 (24%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIY---------QSITGEKG------DFNSRIL 178
            D  ++   + F    +W++    ++DD++         + +T + G          ++ 
Sbjct: 176 ADGTKLAYNRIFREFRTWKRYRGGMADDVWLYDFATKKTEQLTDDPGQDIFPMFIGDKVY 235

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           F+S+      ++ +L  +D         T   +  +  P  S +Q          E+   
Sbjct: 236 FISDR--DKNMRYNLYSVDPATKKTERHTEFTEFDIKFPSASKDQ-------LVFENGGY 286

Query: 239 VYLMDTRIDRAPKR--------------IGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           +Y  D +  +A K               + +    + A   S +GKRAL + + D    +
Sbjct: 287 IYKFDPKTAKAEKVTVRILEDRAGARGALTDVSKSVTAFEVSPDGKRALFAARGD----V 342

Query: 285 YSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ----- 338
           ++V      T  LT T    + +  +SPD   + F SD  G+++++V  ++GS       
Sbjct: 343 FTVPAGDGVTRNLTRTPGAHDRNPKWSPDGKSVAFVSDATGEDEIHVGPADGSAPAKPVT 402

Query: 339 --------------------------------------KRISQDKEASYFDPVWSPQGDL 360
                                                   + Q K     D  WSP    
Sbjct: 403 SAADTYKYEIQWSPDSKKILWGDKKLRLQFVDVETKKVTLVDQAKAWEVRDFTWSPDSKW 462

Query: 361 IAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKD 411
           +AF +   +    + +   + ++   + +       PT+S  G+ L F   +D
Sbjct: 463 VAFGRQEVDTMPKVYLYSLETTKTTAVTDGWYASNTPTFSADGKYLFFVSARD 515



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 107/294 (36%), Gaps = 45/294 (15%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           F +     G + + + + D        LT    Q +F P F     KV + +  D+++  
Sbjct: 190 FRTWKRYRGGMADDVWLYDFATKKTEQLTDDPGQDIF-PMF--IGDKVYFISDRDKNMRY 246

Query: 239 VYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKDEAMDIYSVDLQSNATER- 296
                    +  +R   F    +  P  S +  + +     +    IY  D ++   E+ 
Sbjct: 247 NLYSVDPATKKTERHTEFTEFDIKFPSASKD--QLVF----ENGGYIYKFDPKTAKAEKV 300

Query: 297 --------------LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                         LT+      +   SPD  + +F +    +  ++ + +     + ++
Sbjct: 301 TVRILEDRAGARGALTDVSKSVTAFEVSPDGKRALFAA----RGDVFTVPAGDGVTRNLT 356

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSP 399
           +   A   +P WSP G  +AF   +  +  I V   DGS     V    D+      WSP
Sbjct: 357 RTPGAHDRNPKWSPDGKSVAFVSDATGEDEIHVGPADGSAPAKPVTSAADTYKYEIQWSP 416

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--------AYASDPQWVGF 445
             + +++     GD   +L  +D+  +  TL++           ++ D +WV F
Sbjct: 417 DSKKILW-----GDKKLRLQFVDVETKKVTLVDQAKAWEVRDFTWSPDSKWVAF 465



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 58/335 (17%), Positives = 102/335 (30%), Gaps = 92/335 (27%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   R +T S       PRFSP+   VA+    D +     +    +   PK
Sbjct: 46  DLYTVPAAGGTARRIT-SHPGFEMFPRFSPDGSLVAFTGQYDGNTEVFVV--PAVGGEPK 102

Query: 252 RIG------------NFRSMILAPRFSSNGKRALI------------------------- 274
           R+                   +   ++ +GK  L                          
Sbjct: 103 RLTYTATLGRDEVSDRMGPNNVVIGWTPDGKSVLFRSRMRSFNDFVGQLFTVPVEGGVPE 162

Query: 275 ----------SVQKDE----------------------AMDIYSVDLQSNATERLTNTLF 302
                     S   D                       A D++  D  +  TE+LT+   
Sbjct: 163 ELPLPRGGFASYSADGTKLAYNRIFREFRTWKRYRGGMADDVWLYDFATKKTEQLTDDPG 222

Query: 303 INISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQ--- 357
            +I   +     ++ F SDR+   +  LY +       +R ++  E     P  S     
Sbjct: 223 QDIFPMFI--GDKVYFISDRDKNMRYNLYSVDPATKKTERHTEFTEFDIKFPSASKDQLV 280

Query: 358 ---GDLIA-FTKFSGEKFAIGV-MKKDGSQERLLVEDSNLQAPTW--SPSGRSLIFSRKK 410
              G  I  F   + +   + V + +D +  R  + D +     +  SP G+  +F+ + 
Sbjct: 281 FENGGYIYKFDPKTAKAEKVTVRILEDRAGARGALTDVSKSVTAFEVSPDGKRALFAARG 340

Query: 411 DGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVG 444
           D  T         +G    L  TP  +  +P+W  
Sbjct: 341 DVFTVPA-----GDGVTRNLTRTPGAHDRNPKWSP 370



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 94/260 (36%), Gaps = 16/260 (6%)

Query: 184 VVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           V     ++ + V   DG A  + +T + D   +E ++SP+ +K+ +     +  LR+  +
Sbjct: 378 VSDATGEDEIHVGPADGSAPAKPVTSAADTYKYEIQWSPDSKKILW----GDKKLRLQFV 433

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTL 301
           D    +           +    +S + K      Q+ D    +Y   L++  T  +T+  
Sbjct: 434 DVETKKVTLVDQAKAWEVRDFTWSPDSKWVAFGRQEVDTMPKVYLYSLETTKTTAVTDGW 493

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           + + + ++S D   + F S R+               D +R+     A        P+ D
Sbjct: 494 YASNTPTFSADGKYLFFVSARDFNPVYSSTEWNHAYRDMQRVYFVALAKATPNPLKPKLD 553

Query: 360 ------LIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG 412
                      K   +      +  DG   R++          +   +G +L + R   G
Sbjct: 554 DEPAEPKKDDKKDEKKDAPAVKVDLDGLSGRIVALPGPAANYGSLHAAGNALYYQRSASG 613

Query: 413 DTGSKLYSIDLNGRNETLIN 432
             G +LY  DL  R ET + 
Sbjct: 614 SPG-QLYVFDLGSRKETALG 632


>gi|242826188|ref|XP_002488590.1| WD repeat-containing protein, putative [Talaromyces stipitatus ATCC
            10500]
 gi|218712408|gb|EED11834.1| WD repeat-containing protein, putative [Talaromyces stipitatus ATCC
            10500]
          Length = 1515

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 53/343 (15%), Positives = 114/343 (33%), Gaps = 40/343 (11%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDR---KQIIGKK-------------FFSSPASWR--KIAH 156
            +V+  G  R     +LWD       + + G                 +S +S R  K+  
Sbjct: 789  KVVASGSGR---TVKLWDPATGTLRQTLQGHSGSVHAVAFSPDGKLVASGSSDRTIKLWD 845

Query: 157  TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            + +  + Q++ G  G   +        +V+     ++ + D     +R         ++ 
Sbjct: 846  SATGTLRQTLQGHSGSVYAVAFSPDGKLVASGSGRTVKLWDPATGTLRQTLEGHSGQVYA 905

Query: 217  PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              FSP+ + VA  + D      V L ++      + +      + A  FS +GK    S 
Sbjct: 906  VAFSPDGKLVASGSGDQ----MVKLWNSATGTLRQTLEGHSGWVNAVAFSPDGKLVA-SG 960

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              D+ + ++  D  +    +         + ++SPD   +   S     + + +  S   
Sbjct: 961  SGDDTIKLW--DSATGTLRQTLEDSGWVYAVAFSPDGKLVASGSS---DDTIKLWDSATG 1015

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQA 394
              ++  +      +   +SP G L+A          + +        R  +      + A
Sbjct: 1016 TLRQTLEGHSFWVYAVAFSPDGKLVA---SGSGDQTVKLWDSATGTLRQTLQGHSGWVNA 1072

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              +SP G+ +       GD   KL+     G     +   + +
Sbjct: 1073 VAFSPDGKLVA---SGSGDETIKLWD-SATGTLRQTLQGHSGS 1111



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 101/307 (32%), Gaps = 46/307 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+++  G  R     +LWD                 + R+     S  +Y       G  
Sbjct: 871  GKLVASGSGR---TVKLWDPATG-------------TLRQTLEGHSGQVYAVAFSPDG-- 912

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    + V SG     + + +     +R         +    FSP+ + VA  + DD
Sbjct: 913  --------KLVASGSGDQMVKLWNSATGTLRQTLEGHSGWVNAVAFSPDGKLVASGSGDD 964

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + L D+      + + +    + A  FS +GK    S   D+ + ++  D  +  
Sbjct: 965  ----TIKLWDSATGTLRQTLEDS-GWVYAVAFSPDGKLVA-SGSSDDTIKLW--DSATGT 1016

Query: 294  TER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              + L    F   + ++SPD   +   S   G + + +  S     ++  Q         
Sbjct: 1017 LRQTLEGHSFWVYAVAFSPDGKLVASGS---GDQTVKLWDSATGTLRQTLQGHSGWVNAV 1073

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
             +SP G L+A          I +        R  ++    ++ A  +SP G+   F    
Sbjct: 1074 AFSPDGKLVA---SGSGDETIKLWDSATGTLRQTLQGHSGSVYAVAFSPDGK---FLETN 1127

Query: 411  DGDTGSK 417
             G    +
Sbjct: 1128 QGRFNIE 1134



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 121/353 (34%), Gaps = 43/353 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDR---KQIIGKK---------------FFSSPASWRKIA 155
           G+++  G     V  +LWD       + + G                    S     K+ 
Sbjct: 621 GKLVASGSGDQTV--KLWDSATGTLRQTLQGHSGWVNAVAFSPDGKLVASGSGDDTIKLW 678

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
            + +  + +++ G     ++        +V+     ++ + D     +R         + 
Sbjct: 679 DSATGTLRRTLEGHSDSVDAVAFSPDSKLVASGSGRTVKLWDSATGTLRQTLQGHSGSVH 738

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              FSP+ + VA  + D      + L D+      +++    + + A  FS + K  +++
Sbjct: 739 AVAFSPDGKLVASGSSDR----TIKLWDSATGTLQQKLEGHSNSVDAVAFSPDSK--VVA 792

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVF-ESDREGKEQLYVMQS 333
                 + ++  D  +    +       ++ A ++SPD   +    SDR     + +  S
Sbjct: 793 SGSGRTVKLW--DPATGTLRQTLQGHSGSVHAVAFSPDGKLVASGSSDRT----IKLWDS 846

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SN 391
                ++  Q    S +   +SP G L+A    SG    + +        R  +E     
Sbjct: 847 ATGTLRQTLQGHSGSVYAVAFSPDGKLVA----SGSGRTVKLWDPATGTLRQTLEGHSGQ 902

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           + A  +SP G+ +       GD   KL++       +TL     + +   +  
Sbjct: 903 VYAVAFSPDGKLVA---SGSGDQMVKLWNSATGTLRQTLEGHSGWVNAVAFSP 952



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 82/241 (34%), Gaps = 17/241 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
               S    +    FSP+ + VA  + D      V L D+      + +      + A  
Sbjct: 603 QTLESHSHQVRAVAFSPDGKLVASGSGDQ----TVKLWDSATGTLRQTLQGHSGWVNAVA 658

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
           FS +GK    S   D+ + ++  D  +    R       ++ A ++SPDS  +   S R 
Sbjct: 659 FSPDGKLVA-SGSGDDTIKLW--DSATGTLRRTLEGHSDSVDAVAFSPDSKLVASGSGRT 715

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + +  S     ++  Q    S     +SP G L+A +  S     +        Q+
Sbjct: 716 ----VKLWDSATGTLRQTLQGHSGSVHAVAFSPDGKLVA-SGSSDRTIKLWDSATGTLQQ 770

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           +L    +++ A  +SP  + +            KL+        +TL           + 
Sbjct: 771 KLEGHSNSVDAVAFSPDSKVVA----SGSGRTVKLWDPATGTLRQTLQGHSGSVHAVAFS 826

Query: 444 G 444
            
Sbjct: 827 P 827



 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 17/215 (7%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y       I ++  +++      + + +    + A  FS +GK    S   D+ + ++  
Sbjct: 580 YINKIPSWIQKLPEVESAWSAMLQTLESHSHQVRAVAFSPDGKLVA-SGSGDQTVKLW-- 636

Query: 288 DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D  +    + L        + ++SPD   +   S   G + + +  S     +R  +   
Sbjct: 637 DSATGTLRQTLQGHSGWVNAVAFSPDGKLVASGS---GDDTIKLWDSATGTLRRTLEGHS 693

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
            S     +SP   L+A    SG    + +        R  +     ++ A  +SP G+ +
Sbjct: 694 DSVDAVAFSPDSKLVA----SGSGRTVKLWDSATGTLRQTLQGHSGSVHAVAFSPDGKLV 749

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                   D   KL+     G  +  +   + + D
Sbjct: 750 A---SGSSDRTIKLWD-SATGTLQQKLEGHSNSVD 780


>gi|32472592|ref|NP_865586.1| TolB protein [precursor] [Rhodopirellula baltica SH 1]
 gi|32443829|emb|CAD73270.1| probable TolB protein [Precursor] [Rhodopirellula baltica SH 1]
          Length = 1181

 Score =  106 bits (265), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 55/282 (19%), Positives = 105/282 (37%), Gaps = 37/282 (13%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILF--EPRFSPNQQKVAYATYDDEDILRVYLM 242
             S   K  L V+  DG ++R L    + +L    P +SP+  ++ Y       +    + 
Sbjct: 894  PSSDPKPVLSVVRIDGTDLRDLAEPNETLLHVGSPDWSPDGTQIVYDQQAGSTLTARLMR 953

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTL 301
              +    P  +         P FS +GKR   S  +     +  +D   +    L ++  
Sbjct: 954  VDKTGGDPVDL----GFGSMPTFSPDGKRIAFSAARQG---VGIMDADGSNRTILDSSGW 1006

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-----SYFDPVWSP 356
             I     +SP  + + + S       LYV   N S +K + Q  +A      Y++  WSP
Sbjct: 1007 GIQ----WSPIPNLLAYSS----GGSLYVWDLNTSSRKAVLQGPDAIRYSYIYWNMCWSP 1058

Query: 357  QGDLIAF--TKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDG 412
             G  IA    +    +  I V+     S+ +++   + L     W+     ++F      
Sbjct: 1059 DGKRIALKGRRRDNSQDEIAVVTLSNPSRLQVIPTPAKLGGDLGWASDSLQILFPMLSAE 1118

Query: 413  DTGSKLYSIDLN--GRNETLINTPAY--------ASDPQWVG 444
               ++L+ +D+   G  +   N P+         + D +W+ 
Sbjct: 1119 TRRTQLHCVDVTNPGTPKLWPNQPSDRQISGVSLSKDGKWLA 1160



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 51/120 (42%), Gaps = 10/120 (8%)

Query: 336 SDQKRISQDKEASYFDPVW---SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-- 390
              + +S  K        W   + +   +  +  S  K  + V++ DG+  R L E +  
Sbjct: 862 GGIQLVSIAKGRGTTSAKWLNLTLRAKNLMVSPSSDPKPVLSVVRIDGTDLRDLAEPNET 921

Query: 391 --NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI---NTPAYASDPQWVGF 445
             ++ +P WSP G  +++ ++      ++L  +D  G +   +   + P ++ D + + F
Sbjct: 922 LLHVGSPDWSPDGTQIVYDQQAGSTLTARLMRVDKTGGDPVDLGFGSMPTFSPDGKRIAF 981


>gi|255011806|ref|ZP_05283932.1| putative exported peptidase [Bacteroides fragilis 3_1_12]
 gi|313149645|ref|ZP_07811838.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313138412|gb|EFR55772.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 1093

 Score =  106 bits (265), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 55/302 (18%), Positives = 115/302 (38%), Gaps = 40/302 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ E G FN   ++      +   +    V       +R+L+ + +  L    +  +
Sbjct: 231 FYYLSEENGSFN---IYQRIPGSNASKQ----VTHHTQHPVRFLSMASNGNLC---YGFD 280

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +            + V ++  R D+   R             S +GK     ++ D   
Sbjct: 281 GEIYTLTPGGKSQKVSVKILSDRNDKDLIRQIKTSGATEM-AVSPDGKEVAFILRGD--- 336

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   ++   T+++TNT        ++PD   +V+ S+R G  QLY       D+K+ +
Sbjct: 337 -VYVTSVEYKTTKQITNTPCQERGIDFAPDGRSLVYASERGGLWQLYTSSIVRKDEKQFT 395

Query: 343 Q----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                      + + + F+P +SP G  +AF +      AI V+     + R +++    
Sbjct: 396 YATELKEERLTNSDIASFNPKYSPDGKEVAFLENRT---AIRVINLKTKKVRTVMDAQYQ 452

Query: 393 QAPT-------WSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP--Q 441
            + +       WSP  + ++  F     G     +  ++ +G+ E    T +  SD   +
Sbjct: 453 YSYSDGDQWFEWSPDSKWILSEFI-GIGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAK 511

Query: 442 WV 443
           WV
Sbjct: 512 WV 513



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 68/203 (33%), Gaps = 28/203 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    I++V +      ++T     + +  +SPDS QI F SDR 
Sbjct: 30  AISPDGTTIAFTYKGD----IFTVPVSGGKATQITTNPAFDTTPVWSPDSKQIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI----AFTKFSGEKF-------A 372
           G   ++++   G + +R++     S     +S  G L+             F        
Sbjct: 86  GSLDVFIVSKEGGEPRRLTT-FSGSETPVAFSDAGQLLFTADIMPSAEDAGFPSNGQFQQ 144

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---------IFSRKKDGDTGSKLYSI-- 421
           I  +   G +  ++     ++  + +  G  L          + + +       ++ +  
Sbjct: 145 IYQIPVTGGRP-VMFSSMPMECISINKEGAILYQDKKGYEDYWRKHQKSPIARDIWMLQP 203

Query: 422 DLNGRNETLINTPAYASDPQWVG 444
               R E          +P W  
Sbjct: 204 GQTPRYEKQTTFIGEDREPVWAP 226



 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 79/223 (35%), Gaps = 35/223 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V +          +I    +    P +S + K+   +  
Sbjct: 30  AISPDGTTIAFTY--KGDIFTVPV----SGGKATQITTNPAFDTTPVWSPDSKQIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGK- 325
           +  ++D++ V  +     RLT         ++S D+ Q++F +D             G+ 
Sbjct: 84  RMGSLDVFIVSKEGGEPRRLTTFSGSETPVAFS-DAGQLLFTADIMPSAEDAGFPSNGQF 142

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIG 374
           +Q+Y +   G      S            + +G ++   K   E +            I 
Sbjct: 143 QQIYQIPVTGGRPVMFSSMP---MECISINKEGAILYQDKKGYEDYWRKHQKSPIARDIW 199

Query: 375 VMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +++   +   E+        + P W+P G+S  +  +++G   
Sbjct: 200 MLQPGQTPRYEKQTTFIGEDREPVWAPDGKSFYYLSEENGSFN 242



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 88/226 (38%), Gaps = 22/226 (9%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPK--RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           Y     +  +   +   +  + P+  +   F      P ++ +GK      +++ + +IY
Sbjct: 185 YWRKHQKSPIARDIWMLQPGQTPRYEKQTTFIGEDREPVWAPDGKSFYYLSEENGSFNIY 244

Query: 286 SVDLQSNATERLTNT---------LFINISASYSPDSSQIVFESDREGKEQLYVMQ--SN 334
                SNA++++T+          +  N +  Y  D    ++     GK Q   ++  S+
Sbjct: 245 QRIPGSNASKQVTHHTQHPVRFLSMASNGNLCYGFDGE--IYTLTPGGKSQKVSVKILSD 302

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQ 393
            +D+  I Q K +   +   SP G  +AF         + V   +    + +       +
Sbjct: 303 RNDKDLIRQIKTSGATEMAVSPDGKEVAFILRGD----VYVTSVEYKTTKQITNTPCQER 358

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
              ++P GRSL+++ ++ G    +LY+  +  ++E          +
Sbjct: 359 GIDFAPDGRSLVYASERGGLW--QLYTSSIVRKDEKQFTYATELKE 402



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 38/106 (35%), Gaps = 9/106 (8%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSG 401
           Q+          SP G  IAFT        I  +   G +  ++    +    P WSP  
Sbjct: 20  QEGPLWMRHCAISPDGTTIAFTYKGD----IFTVPVSGGKATQITTNPAFDTTPVWSPDS 75

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           + + F+  + G     ++ +   G     + T + +  P  V F D
Sbjct: 76  KQIAFASDRMGS--LDVFIVSKEGGEPRRLTTFSGSETP--VAFSD 117



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 91/278 (32%), Gaps = 38/278 (13%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    + ++   K  +  +   G     +T         P +SP+ +++A+A+     + 
Sbjct: 31  ISPDGTTIAFTYKGDIFTVPVSGGKATQITT-NPAFDTTPVWSPDSKQIAFASDRMGSLD 89

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV------------QKDEAMDIY 285
               + ++    P+R+  F        FS +  + L +                +   IY
Sbjct: 90  --VFIVSKEGGEPRRLTTFSGSETPVAFS-DAGQLLFTADIMPSAEDAGFPSNGQFQQIY 146

Query: 286 SVDLQSNATERLTNTL----FINISASYSPDSSQIV--FESDREGKE---QLYVMQSNGS 336
            + +        ++       IN   +      +    +    +       ++++Q   +
Sbjct: 147 QIPVTGGRPVMFSSMPMECISINKEGAILYQDKKGYEDYWRKHQKSPIARDIWMLQPGQT 206

Query: 337 D--QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              +K+ +   E    +PVW+P G    +       F I       +  + +    + Q 
Sbjct: 207 PRYEKQTTFIGE--DREPVWAPDGKSFYYLSEENGSFNIYQRIPGSNASKQVTH--HTQH 262

Query: 395 PTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNGRNETL 430
           P      R L  +   +       ++Y++   G+++ +
Sbjct: 263 PV-----RFLSMASNGNLCYGFDGEIYTLTPGGKSQKV 295



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F P++SP+ ++VA+        ++ +     R     +   ++        +
Sbjct: 405 LTNSDIASFNPKYSPDGKEVAFLENRTAIRVINLKTKKVRTVMDAQYQYSYSDGDQWFEW 464

Query: 266 SSNGKRA---LISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K      I +      DI  ++         LT + + + +A +      +V+ SD
Sbjct: 465 SPDSKWILSEFIGIGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAKWVLGGKAMVWFSD 524

Query: 322 REG 324
           R G
Sbjct: 525 RAG 527


>gi|260911011|ref|ZP_05917647.1| tricorn family protease MdsD [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260634815|gb|EEX52869.1| tricorn family protease MdsD [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 1077

 Score =  106 bits (264), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 41/201 (20%), Positives = 66/201 (32%), Gaps = 28/201 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    IYSV        +LT     +    +SPDS Q+ F S+RE
Sbjct: 30  AISPDGSTVAFTYKGD----IYSVPATGGTARQLTTNAAHDTHPVWSPDSKQLAFCSNRE 85

Query: 324 GKEQLYVMQSNGSDQKRISQ-----------DKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           G   +YVMQ  G   +RI+            D     +     P    I F         
Sbjct: 86  GSMDIYVMQREGGTPRRITTNSGNETPIAFKDNNTVLYTTSIMPTAQSIIFANR--MLPQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLYSIDL 423
           +  +  +GS+  L      +   +  P+G  L          + +         ++ +  
Sbjct: 144 VYEVGTNGSRPHLFSALPMMDI-SIRPNGDLLYHDQKGYEDPWRKHHRSPITRDIW-LRR 201

Query: 424 NGRNETLINTPAYASDPQWVG 444
            G+   L N       P W  
Sbjct: 202 AGKYTKLTNFNGEDRTPVWAA 222



 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 58/303 (19%), Positives = 113/303 (37%), Gaps = 38/303 (12%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           D +  ++ E G FN   +++     +G  + +    +     +R+LT + D  L    + 
Sbjct: 225 DTFYYLSEEDGTFN---VYMRNIDGTGKQQLTRHTTNP----VRFLTAATDGTLC---YG 274

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + +            L+V ++  +ID+   R   F         S +GK     +  D 
Sbjct: 275 YDGEIYTLKQGSQPQKLKVSIVTDKIDKDLDRQTLFTGATEI-SLSPDGKELAFVLHGD- 332

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              +Y   +    T+++T+T        ++PD   IV+ S+R G  Q+Y  +     +K 
Sbjct: 333 ---VYVTSIDYRTTKQITDTPEQEREIQFAPDGRSIVYASERGGLWQIYRTKLKLDKEKS 389

Query: 341 ISQDK----------EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +             + +   P +SP G  IAF +       + V+       R +++  
Sbjct: 390 FAYATQLEEEQLVKSDRTSQQPRFSPDGKSIAFFEDRST---LRVLDIKSKAVRTVMDGK 446

Query: 391 NLQAP-------TWSPSGRSLIFSR-KKDGDTGSKLYSIDLNGRNETLINTPAYASD--P 440
            + +         WSP  R L+ S     G     +  +  +G+ E    T +  SD   
Sbjct: 447 YVYSYADGDIGFAWSPDSRWLLSSYIGVGGWNSPDIALVKADGKGEIHNLTQSGYSDAGG 506

Query: 441 QWV 443
           +WV
Sbjct: 507 RWV 509



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 81/234 (34%), Gaps = 35/234 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   VA+      DI  V           +++    +    P +S + K+      
Sbjct: 30  AISPDGSTVAFTY--KGDIYSV----PATGGTARQLTTNAAHDTHPVWSPDSKQLAFCSN 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASY------------SPDSSQIVFESDREGK 325
           ++ +MDIY +  +     R+T         ++             P +  I+F +     
Sbjct: 84  REGSMDIYVMQREGGTPRRITTNSGNETPIAFKDNNTVLYTTSIMPTAQSIIFANRM--L 141

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-----------TKFSGEKFAIG 374
            Q+Y + +NGS     S        D    P GDL+                S     I 
Sbjct: 142 PQVYEVGTNGSRPHLFSALP---MMDISIRPNGDLLYHDQKGYEDPWRKHHRSPITRDIW 198

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           + ++ G   +L   +   + P W+  G +  +  ++DG     + +ID  G+ +
Sbjct: 199 L-RRAGKYTKLTNFNGEDRTPVWAAQGDTFYYLSEEDGTFNVYMRNIDGTGKQQ 251



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/394 (10%), Positives = 110/394 (27%), Gaps = 136/394 (34%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    S V+   K  +  +   G   R LT +       P +SP+ +++A+ +  +   +
Sbjct: 31  ISPDGSTVAFTYKGDIYSVPATGGTARQLTTNAAH-DTHPVWSPDSKQLAFCSNREGS-M 88

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRF------------SSNGKRALIS---------- 275
            +Y+M  R    P+RI           F                +  + +          
Sbjct: 89  DIYVMQ-REGGTPRRITTNSGNETPIAFKDNNTVLYTTSIMPTAQSIIFANRMLPQVYEV 147

Query: 276 ----VQKDEAMDIYSVDLQ-----------------------------------SNATER 296
                +      +  +D+                                    +    +
Sbjct: 148 GTNGSRPHLFSALPMMDISIRPNGDLLYHDQKGYEDPWRKHHRSPITRDIWLRRAGKYTK 207

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK----------- 345
           LTN    + +  ++       + S+ +G   +Y+   +G+ ++++++             
Sbjct: 208 LTNFNGEDRTPVWAAQGDTFYYLSEEDGTFNVYMRNIDGTGKQQLTRHTTNPVRFLTAAT 267

Query: 346 ------------------------------------------EASYFDPVWSPQGDLIAF 363
                                                          +   SP G  +AF
Sbjct: 268 DGTLCYGYDGEIYTLKQGSQPQKLKVSIVTDKIDKDLDRQTLFTGATEISLSPDGKELAF 327

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYS-- 420
                    + V   D    + + +    +    ++P GRS++++ ++ G    ++Y   
Sbjct: 328 VLHGD----VYVTSIDYRTTKQITDTPEQEREIQFAPDGRSIVYASERGGLW--QIYRTK 381

Query: 421 IDLNGRN----------ETLINTPAYASDPQWVG 444
           + L+             E L+ +   +  P++  
Sbjct: 382 LKLDKEKSFAYATQLEEEQLVKSDRTSQQPRFSP 415



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 123/349 (35%), Gaps = 66/349 (18%)

Query: 69  VSKD--LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           +++D  L+R+  +          K+TN +   R   W + G         + E      V
Sbjct: 193 ITRDIWLRRAGKYT---------KLTNFNGEDRTPVWAAQGDTFY----YLSEEDGTFNV 239

Query: 127 EFRLWDVKDRKQIIGKK----FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
             R  D   ++Q+         F + A+   + +    +IY ++         ++  V++
Sbjct: 240 YMRNIDGTGKQQLTRHTTNPVRFLTAATDGTLCYGYDGEIY-TLKQGSQPQKLKVSIVTD 298

Query: 183 SVVSGIIKNSLCV------MDRDGANIRYLTPS-----------RDQILFEP------RF 219
            +   + + +L        +  DG  + ++                QI   P      +F
Sbjct: 299 KIDKDLDRQTLFTGATEISLSPDGKELAFVLHGDVYVTSIDYRTTKQITDTPEQEREIQF 358

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRA----------PKRIGNFRSMILAPRFSSNG 269
           +P+ + + YA+ +   + ++Y    ++D+            +++         PRFS +G
Sbjct: 359 APDGRSIVYAS-ERGGLWQIYRTKLKLDKEKSFAYATQLEEEQLVKSDRTSQQPRFSPDG 417

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           K        ++   +  +D++S A   + +  ++      +I  ++SPDS  ++      
Sbjct: 418 KSIAFF---EDRSTLRVLDIKSKAVRTVMDGKYVYSYADGDIGFAWSPDSRWLLSSYIGV 474

Query: 324 GK---EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           G      + +++++G  +         S     W   G  + F      
Sbjct: 475 GGWNSPDIALVKADGKGEIHNLTQSGYSDAGGRWVLGGKAMLFVSDRAG 523



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 36/99 (36%), Gaps = 9/99 (9%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSR 408
                SP G  +AFT        I  +   G   R L  + ++   P WSP  + L F  
Sbjct: 27  RHCAISPDGSTVAFTYKGD----IYSVPATGGTARQLTTNAAHDTHPVWSPDSKQLAFCS 82

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
            ++G     +Y +   G     I T +    P  + F D
Sbjct: 83  NREGSM--DIYVMQREGGTPRRITTNSGNETP--IAFKD 117



 Score = 43.9 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 13/67 (19%)

Query: 385 LLVEDSNLQAPTW------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYA 437
           L    S  + P W      SP G ++ F+ K        +YS+   G     + T  A+ 
Sbjct: 13  LATSVSAQENPLWMRHCAISPDGSTVAFTYK------GDIYSVPATGGTARQLTTNAAHD 66

Query: 438 SDPQWVG 444
           + P W  
Sbjct: 67  THPVWSP 73


>gi|265767748|ref|ZP_06095280.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263252420|gb|EEZ23948.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 1095

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 115/302 (38%), Gaps = 40/302 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ E G FN   ++          +    V       +R+L+ + +  L    +  +
Sbjct: 231 FYYLSEENGTFN---VYRRTPGSDTSKQ----VTHHKQHPVRFLSMASNGNLC---YGFD 280

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +    A       + V ++  R D+   R             S +GK     ++ D   
Sbjct: 281 GEIYTLAPGGKPQKVSVKILSDRNDKELIRQIKTSGATEM-AVSPDGKEVAFILRGD--- 336

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   ++   T+++TNT        ++PD   +V+ S+R G  QLY       D+K+ +
Sbjct: 337 -VYVTSVEYKTTKQVTNTPCQERGIDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKQFT 395

Query: 343 Q----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                      + + + F+P +SP G  IAF +      AI V+     + R +++    
Sbjct: 396 YATELKEERLTNSDIASFNPKYSPDGKEIAFLENRT---AIRVINLKTKKVRTVMDAQYQ 452

Query: 393 QAPT-------WSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP--Q 441
            + +       WSP  + ++  F     G     +  ++ +G+ E    T +  SD   +
Sbjct: 453 YSYSDGDQWFEWSPDSKWILSEFI-GIGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAK 511

Query: 442 WV 443
           WV
Sbjct: 512 WV 513



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 71/204 (34%), Gaps = 30/204 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    I++V +      ++T     + +  +SPDS QI F SDR 
Sbjct: 30  AISPDGTTIAFTYKGD----IFTVPVSGGKATQITTNPAFDTTPIWSPDSKQIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKF- 371
           G   ++++  +G + +R++           ++  G  I FT             S  +F 
Sbjct: 86  GSMDVFIVSKDGGEPRRLTT-FSGGETPVAFTDAG-HILFTADIMPSTEDAGFPSNGQFQ 143

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---------IFSRKKDGDTGSKLYSID 422
            I  +   G +  ++     ++  + +  G  L          + + +       ++ + 
Sbjct: 144 QIYQIPVSGGRP-VMFSSMPMECISINKEGTILYQDKKGYEDYWRKHQKSPIARDIWMLR 202

Query: 423 L--NGRNETLINTPAYASDPQWVG 444
                R E          +P W  
Sbjct: 203 PGQTPRYEKQTTFIGEDREPVWAP 226



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 78/223 (34%), Gaps = 35/223 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V +          +I    +    P +S + K+   +  
Sbjct: 30  AISPDGTTIAFTY--KGDIFTVPV----SGGKATQITTNPAFDTTPIWSPDSKQIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGK- 325
           +  +MD++ V        RLT         +++ D+  I+F +D             G+ 
Sbjct: 84  RMGSMDVFIVSKDGGEPRRLTTFSGGETPVAFT-DAGHILFTADIMPSTEDAGFPSNGQF 142

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIG 374
           +Q+Y +  +G      S            + +G ++   K   E +            I 
Sbjct: 143 QQIYQIPVSGGRPVMFSSMP---MECISINKEGTILYQDKKGYEDYWRKHQKSPIARDIW 199

Query: 375 VMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +++   +   E+        + P W+P G+S  +  +++G   
Sbjct: 200 MLRPGQTPRYEKQTTFIGEDREPVWAPDGKSFYYLSEENGTFN 242



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 90/241 (37%), Gaps = 30/241 (12%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPK--RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           Y     +  +   +   R  + P+  +   F      P ++ +GK      +++   ++Y
Sbjct: 185 YWRKHQKSPIARDIWMLRPGQTPRYEKQTTFIGEDREPVWAPDGKSFYYLSEENGTFNVY 244

Query: 286 SVDLQSNATERLTNTL---------FINISASYSPDSSQIVFESDREGKEQLYVMQ--SN 334
                S+ ++++T+             N +  Y  D    ++     GK Q   ++  S+
Sbjct: 245 RRTPGSDTSKQVTHHKQHPVRFLSMASNGNLCYGFDGE--IYTLAPGGKPQKVSVKILSD 302

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQ 393
            +D++ I Q K +   +   SP G  +AF         + V   +    + +       +
Sbjct: 303 RNDKELIRQIKTSGATEMAVSPDGKEVAFILRGD----VYVTSVEYKTTKQVTNTPCQER 358

Query: 394 APTWSPSGRSLIFSRKKDG----------DTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              ++P GR+L+++ ++ G              K ++     + E L N+   + +P++ 
Sbjct: 359 GIDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKQFTYATELKEERLTNSDIASFNPKYS 418

Query: 444 G 444
            
Sbjct: 419 P 419



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 9/99 (9%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSR 408
                SP G  IAFT        I  +   G +  ++    +    P WSP  + + F+ 
Sbjct: 27  RHCAISPDGTTIAFTYKGD----IFTVPVSGGKATQITTNPAFDTTPIWSPDSKQIAFAS 82

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
            + G     ++ +  +G     + T +    P  V F D
Sbjct: 83  DRMGSM--DVFIVSKDGGEPRRLTTFSGGETP--VAFTD 117



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 59/170 (34%), Gaps = 23/170 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDT----------RIDRAPKRIGNFRSMILAPRFSSN 268
           F+P+ + + YA+ +   + ++Y                +   +R+ N       P++S +
Sbjct: 362 FAPDGRTLVYAS-ERGGLWQLYTSTIVRKDEKQFTYATELKEERLTNSDIASFNPKYSPD 420

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN------TLFINISASYSPDSSQIV--FES 320
           GK       +     I  ++L++     + +          +    +SPDS  I+  F  
Sbjct: 421 GKEIAFLENR---TAIRVINLKTKKVRTVMDAQYQYSYSDGDQWFEWSPDSKWILSEFIG 477

Query: 321 DREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                 + + ++ ++G  +     +   S  +  W   G  + +      
Sbjct: 478 IGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAKWVLGGKAMVWFSDRAG 527



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 88/278 (31%), Gaps = 38/278 (13%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    + ++   K  +  +   G     +T         P +SP+ +++A+A+     + 
Sbjct: 31  ISPDGTTIAFTYKGDIFTVPVSGGKATQITT-NPAFDTTPIWSPDSKQIAFASDRMGSMD 89

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV------------QKDEAMDIY 285
               + ++    P+R+  F        F ++    L +                +   IY
Sbjct: 90  --VFIVSKDGGEPRRLTTFSGGETPVAF-TDAGHILFTADIMPSTEDAGFPSNGQFQQIY 146

Query: 286 SVDLQSNATERLTNTL----FINISASYSPDSSQIV--FESDREGKE---QLYVMQSNGS 336
            + +        ++       IN   +      +    +    +       +++++   +
Sbjct: 147 QIPVSGGRPVMFSSMPMECISINKEGTILYQDKKGYEDYWRKHQKSPIARDIWMLRPGQT 206

Query: 337 D--QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              +K+ +   E    +PVW+P G    +       F +          + +    + Q 
Sbjct: 207 PRYEKQTTFIGE--DREPVWAPDGKSFYYLSEENGTFNVYRRTPGSDTSKQVTH--HKQH 262

Query: 395 PTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNGRNETL 430
           P      R L  +   +       ++Y++   G+ + +
Sbjct: 263 PV-----RFLSMASNGNLCYGFDGEIYTLAPGGKPQKV 295



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 46/123 (37%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F P++SP+ +++A+        ++ +     R     +   ++        +
Sbjct: 405 LTNSDIASFNPKYSPDGKEIAFLENRTAIRVINLKTKKVRTVMDAQYQYSYSDGDQWFEW 464

Query: 266 SSNGKRA---LISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K      I +      DI  ++         LT + + + +A +      +V+ SD
Sbjct: 465 SPDSKWILSEFIGIGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAKWVLGGKAMVWFSD 524

Query: 322 REG 324
           R G
Sbjct: 525 RAG 527



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           ++    SP G ++ F+ K        ++++ ++G   T I T PA+ + P W  
Sbjct: 26  MRHCAISPDGTTIAFTYK------GDIFTVPVSGGKATQITTNPAFDTTPIWSP 73


>gi|156741360|ref|YP_001431489.1| peptidase S9 prolyl oligopeptidase [Roseiflexus castenholzii DSM
           13941]
 gi|156232688|gb|ABU57471.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Roseiflexus castenholzii DSM 13941]
          Length = 708

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 57/273 (20%), Positives = 109/273 (39%), Gaps = 39/273 (14%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           R   L EP+ SP+ +++A+     +       R   +       P+R+ +  +   APR+
Sbjct: 26  RLGWLEEPQVSPDGREIAFVRVTIDRSANANRRAIWIAPTDGGPPRRLTSG-TNDSAPRW 84

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           S +G+     SV+ D+   +Y +        RLT+        ++SPD  +I F S    
Sbjct: 85  SPDGRWLAFVSVRGDDRPQLYVLRRDGGEARRLTSLPQGVSDPAWSPDGRRIAFLSRLNA 144

Query: 325 KEQLY-------VMQSNGSDQKRISQDK---EASYFDPVWSPQGDLIA----FTKFSGEK 370
            E+            ++    K++ + +   E   FDP    +    A    F   S + 
Sbjct: 145 AERASEDASEPEPEPADEFMHKQLVERRKHEEQRRFDPRVVRRLPYRAGVEFFDDRSTQM 204

Query: 371 FAIGVMKKDGS---QERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL--- 423
           + I V   D +   Q R + + D +  AP W P G+S++ +  +D +  S+ +  D+   
Sbjct: 205 YIIEVPDDDDAPAPQPRRITDADLDFGAPVWMPDGQSVLTTATRDPEADSQFFFFDVLRV 264

Query: 424 ----NGR-NETLINTPAY-------ASDPQWVG 444
                GR +   +  P +       + D +W+ 
Sbjct: 265 PVLPEGRADPQRLTAPGFTHFAPLPSPDGRWIA 297



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 107/303 (35%), Gaps = 40/303 (13%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
            + V+    +   + ++ +   DG   R LT   +     PR+SP+ + +A+ +   +D 
Sbjct: 44  FVRVTIDRSANANRRAIWIAPTDGGPPRRLTSGTNDSA--PRWSPDGRWLAFVSVRGDDR 101

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-- 294
            ++Y++  R     +R+ +    +  P +S +G+R    + +  A +  S D        
Sbjct: 102 PQLYVLR-RDGGEARRLTSLPQGVSDPAWSPDGRRIAF-LSRLNAAERASEDASEPEPEP 159

Query: 295 ------ERLTNTLFINISASYSPDSSQIV-------FESDREGKEQLYVMQSNGS----D 337
                 ++L           + P   + +       F  DR  +  +  +  +       
Sbjct: 160 ADEFMHKQLVERRKHEEQRRFDPRVVRRLPYRAGVEFFDDRSTQMYIIEVPDDDDAPAPQ 219

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSG----------EKFAIGVMKKDGSQERLLV 387
            +RI+ D +  +  PVW P G  +  T              +   + V+ +  +  + L 
Sbjct: 220 PRRIT-DADLDFGAPVWMPDGQSVLTTATRDPEADSQFFFFDVLRVPVLPEGRADPQRLT 278

Query: 388 EDS-NLQAPTWSPSGRSLIFSR---KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-- 441
                  AP  SP GR +   R    +   + + L  +D  G     +   A  +     
Sbjct: 279 APGFTHFAPLPSPDGRWIACLRMAENQPFASATSLVVMDAAGGEPRNLTAAADLNIAAYD 338

Query: 442 WVG 444
           W+ 
Sbjct: 339 WLP 341



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 72/225 (32%), Gaps = 34/225 (15%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD----------IY 285
           I+ V   D      P+RI +      AP +  +G+  L +  +D   D          + 
Sbjct: 206 IIEVPDDDDAPAPQPRRITDADLDFGAPVWMPDGQSVLTTATRDPEADSQFFFFDVLRVP 265

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQSNGSDQKR 340
            +       +RLT   F + +   SPD   I      E +       L VM + G + + 
Sbjct: 266 VLPEGRADPQRLTAPGFTHFAPLPSPDGRWIACLRMAENQPFASATSLVVMDAAGGEPRN 325

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           ++   + +     W P  D +           +  +  DG     L +          P 
Sbjct: 326 LTAAADLNIAAYDWLPGSDGLLCLAGWRGAQPLWRVALDGGGCERLAQ---------MPD 376

Query: 401 GRSLI-FSRKKDGDTGS---------KLYSIDLNGRNETLINTPA 435
            R +  F   +DG             +LY+ + +G    L    A
Sbjct: 377 DRFIAEFDTGRDGTIAFVAGDAANPCELYARNKHGVERRLTAFNA 421



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 66/201 (32%), Gaps = 15/201 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM--------DTRIDRAPKR 252
           A         D     P + P+ Q V      D +    +                 P+R
Sbjct: 217 APQPRRITDADLDFGAPVWMPDGQSVLTTATRDPEADSQFFFFDVLRVPVLPEGRADPQR 276

Query: 253 IGNFRSMILAPRFSSNGKRAL---ISVQKDE--AMDIYSVDLQSNATERLTNTLFINISA 307
           +        AP  S +G+      ++  +    A  +  +D        LT    +NI+A
Sbjct: 277 LTAPGFTHFAPLPSPDGRWIACLRMAENQPFASATSLVVMDAAGGEPRNLTAAADLNIAA 336

Query: 308 -SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             + P S  ++  +   G + L+ +  +G   +R++Q  +  +     + +   IAF   
Sbjct: 337 YDWLPGSDGLLCLAGWRGAQPLWRVALDGGGCERLAQMPDDRFIAEFDTGRDGTIAFVAG 396

Query: 367 SGEKF-AIGVMKKDGSQERLL 386
                  +    K G + RL 
Sbjct: 397 DAANPCELYARNKHGVERRLT 417



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 22/63 (34%), Gaps = 4/63 (6%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           L     L+ P  SP GR + F R    +        ++    +G     + +    S P+
Sbjct: 24  LYRLGWLEEPQVSPDGREIAFVRVTIDRSANANRRAIWIAPTDGGPPRRLTSGTNDSAPR 83

Query: 442 WVG 444
           W  
Sbjct: 84  WSP 86


>gi|253567152|ref|ZP_04844602.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251943983|gb|EES84502.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 1095

 Score =  106 bits (264), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 115/302 (38%), Gaps = 40/302 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ E G FN   ++          +    V       +R+L+ + +  L    +  +
Sbjct: 231 FYYLSEENGTFN---VYQRTPGSDTSKQ----VTHHKQHPVRFLSMASNGNLC---YGFD 280

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +    A       + V ++  R D+   R             S +GK     ++ D   
Sbjct: 281 GEIYTLAPGGKPQKVSVKILSDRNDKELIRQIKTSGATEM-AVSPDGKEVAFILRGD--- 336

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   ++   T+++TNT        ++PD   +V+ S+R G  QLY       D+K+ +
Sbjct: 337 -VYVTSVEYKTTKQVTNTPCQERGIDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKQFT 395

Query: 343 Q----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                      + + + F+P +SP G  IAF +      AI V+     + R +++    
Sbjct: 396 YATELKEERLTNSDVASFNPKYSPDGKEIAFLENRT---AIRVINLKTKKVRTVMDAQYQ 452

Query: 393 QAPT-------WSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP--Q 441
            + +       WSP  + ++  F     G     +  ++ +G+ E    T +  SD   +
Sbjct: 453 YSYSDGDQWFEWSPDSKWILSEFI-GIGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAK 511

Query: 442 WV 443
           WV
Sbjct: 512 WV 513



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 71/204 (34%), Gaps = 30/204 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    I++V +      ++T     + +  +SPDS QI F SDR 
Sbjct: 30  AISPDGTTIAFTYKGD----IFTVPVSGGKATQITTNPAFDTTPIWSPDSKQIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKF- 371
           G   ++++  +G + +R++           ++  G  I FT             S  +F 
Sbjct: 86  GSMDVFIVSKDGGEPRRLTT-FSGGETPVAFTDAG-HILFTADIMPSTEDAGFPSNGQFQ 143

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---------IFSRKKDGDTGSKLYSID 422
            I  +   G +  ++     ++  + +  G  L          + + +       ++ + 
Sbjct: 144 QIYQIPVSGGRP-VMFSSMPMECISINKEGTILYQDKKGYEDYWRKHQKSPIARDIWMLR 202

Query: 423 L--NGRNETLINTPAYASDPQWVG 444
                R E          +P W  
Sbjct: 203 PGQTPRYEKQTTFIGEDREPVWAP 226



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 78/223 (34%), Gaps = 35/223 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V +          +I    +    P +S + K+   +  
Sbjct: 30  AISPDGTTIAFTY--KGDIFTVPV----SGGKATQITTNPAFDTTPIWSPDSKQIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGK- 325
           +  +MD++ V        RLT         +++ D+  I+F +D             G+ 
Sbjct: 84  RMGSMDVFIVSKDGGEPRRLTTFSGGETPVAFT-DAGHILFTADIMPSTEDAGFPSNGQF 142

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIG 374
           +Q+Y +  +G      S            + +G ++   K   E +            I 
Sbjct: 143 QQIYQIPVSGGRPVMFSSMP---MECISINKEGTILYQDKKGYEDYWRKHQKSPIARDIW 199

Query: 375 VMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +++   +   E+        + P W+P G+S  +  +++G   
Sbjct: 200 MLRPGQTPRYEKQTTFIGEDREPVWAPDGKSFYYLSEENGTFN 242



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 90/241 (37%), Gaps = 30/241 (12%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPK--RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           Y     +  +   +   R  + P+  +   F      P ++ +GK      +++   ++Y
Sbjct: 185 YWRKHQKSPIARDIWMLRPGQTPRYEKQTTFIGEDREPVWAPDGKSFYYLSEENGTFNVY 244

Query: 286 SVDLQSNATERLTNTL---------FINISASYSPDSSQIVFESDREGKEQLYVMQ--SN 334
                S+ ++++T+             N +  Y  D    ++     GK Q   ++  S+
Sbjct: 245 QRTPGSDTSKQVTHHKQHPVRFLSMASNGNLCYGFDGE--IYTLAPGGKPQKVSVKILSD 302

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQ 393
            +D++ I Q K +   +   SP G  +AF         + V   +    + +       +
Sbjct: 303 RNDKELIRQIKTSGATEMAVSPDGKEVAFILRGD----VYVTSVEYKTTKQVTNTPCQER 358

Query: 394 APTWSPSGRSLIFSRKKDG----------DTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              ++P GR+L+++ ++ G              K ++     + E L N+   + +P++ 
Sbjct: 359 GIDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKQFTYATELKEERLTNSDVASFNPKYS 418

Query: 444 G 444
            
Sbjct: 419 P 419



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 9/99 (9%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSR 408
                SP G  IAFT        I  +   G +  ++    +    P WSP  + + F+ 
Sbjct: 27  RHCAISPDGTTIAFTYKGD----IFTVPVSGGKATQITTNPAFDTTPIWSPDSKQIAFAS 82

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
            + G     ++ +  +G     + T +    P  V F D
Sbjct: 83  DRMGSM--DVFIVSKDGGEPRRLTTFSGGETP--VAFTD 117



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 59/170 (34%), Gaps = 23/170 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDT----------RIDRAPKRIGNFRSMILAPRFSSN 268
           F+P+ + + YA+ +   + ++Y                +   +R+ N       P++S +
Sbjct: 362 FAPDGRTLVYAS-ERGGLWQLYTSTIVRKDEKQFTYATELKEERLTNSDVASFNPKYSPD 420

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN------TLFINISASYSPDSSQIV--FES 320
           GK       +     I  ++L++     + +          +    +SPDS  I+  F  
Sbjct: 421 GKEIAFLENR---TAIRVINLKTKKVRTVMDAQYQYSYSDGDQWFEWSPDSKWILSEFIG 477

Query: 321 DREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                 + + ++ ++G  +     +   S  +  W   G  + +      
Sbjct: 478 IGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAKWVLGGKAMVWFSDRAG 527



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 88/278 (31%), Gaps = 38/278 (13%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    + ++   K  +  +   G     +T         P +SP+ +++A+A+     + 
Sbjct: 31  ISPDGTTIAFTYKGDIFTVPVSGGKATQITT-NPAFDTTPIWSPDSKQIAFASDRMGSMD 89

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV------------QKDEAMDIY 285
               + ++    P+R+  F        F ++    L +                +   IY
Sbjct: 90  --VFIVSKDGGEPRRLTTFSGGETPVAF-TDAGHILFTADIMPSTEDAGFPSNGQFQQIY 146

Query: 286 SVDLQSNATERLTNTL----FINISASYSPDSSQIV--FESDREGKE---QLYVMQSNGS 336
            + +        ++       IN   +      +    +    +       +++++   +
Sbjct: 147 QIPVSGGRPVMFSSMPMECISINKEGTILYQDKKGYEDYWRKHQKSPIARDIWMLRPGQT 206

Query: 337 D--QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              +K+ +   E    +PVW+P G    +       F +          + +    + Q 
Sbjct: 207 PRYEKQTTFIGE--DREPVWAPDGKSFYYLSEENGTFNVYQRTPGSDTSKQVTH--HKQH 262

Query: 395 PTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNGRNETL 430
           P      R L  +   +       ++Y++   G+ + +
Sbjct: 263 PV-----RFLSMASNGNLCYGFDGEIYTLAPGGKPQKV 295



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 46/123 (37%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F P++SP+ +++A+        ++ +     R     +   ++        +
Sbjct: 405 LTNSDVASFNPKYSPDGKEIAFLENRTAIRVINLKTKKVRTVMDAQYQYSYSDGDQWFEW 464

Query: 266 SSNGKRA---LISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K      I +      DI  ++         LT + + + +A +      +V+ SD
Sbjct: 465 SPDSKWILSEFIGIGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAKWVLGGKAMVWFSD 524

Query: 322 REG 324
           R G
Sbjct: 525 RAG 527



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           ++    SP G ++ F+ K        ++++ ++G   T I T PA+ + P W  
Sbjct: 26  MRHCAISPDGTTIAFTYK------GDIFTVPVSGGKATQITTNPAFDTTPIWSP 73


>gi|159028403|emb|CAO89845.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 1201

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 100/261 (38%), Gaps = 16/261 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ +G    ++ + D +           +  +    FSP+ + +A  + D      + L
Sbjct: 583 KTLATGSDDGTIKLWDVETGQEIRTLSGHNGKVNSVSFSPDGKTLATGSEDK----TIKL 638

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            +         +      + +  FS +GK    +   D  + ++  D+++    R L+  
Sbjct: 639 WNVETGEEIGTLSGHDGYVFSVSFSRDGKTLA-TGSDDGTIKLW--DVETGQEIRTLSGH 695

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGD 359
                S S+S D   + F+SD  G  +L+ +    G + + +S+      +   +S  G 
Sbjct: 696 NGKVNSVSFSSDGKTLAFDSD-GGTIKLWYIDIETGKEIRTLSEWNRGCVYSVSFSNDGK 754

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A T  + +   +  ++  G + R L   +  + + ++S  G++L        D   KL
Sbjct: 755 TLA-TGSADKTIKLWNVET-GEEIRTLSGHNGKVNSVSFSSDGKTLA---TGSADKTIKL 809

Query: 419 YSIDLNGRNETLINTPAYASD 439
           ++++      TL         
Sbjct: 810 WNVETGKEIRTLSGHNGEVHS 830



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 112/312 (35%), Gaps = 43/312 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G D   +  +LWDV+  ++I                        ++++G  G  
Sbjct: 582 GKTLATGSDDGTI--KLWDVETGQEI------------------------RTLSGHNGKV 615

Query: 174 NSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           NS       +++ +G    ++ + + +           D  +F   FS + + +A  + D
Sbjct: 616 NSVSFSPDGKTLATGSEDKTIKLWNVETGEEIGTLSGHDGYVFSVSFSRDGKTLATGSDD 675

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 + L D    +  + +      + +  FSS+GK           + ++ +D+++ 
Sbjct: 676 G----TIKLWDVETGQEIRTLSGHNGKVNSVSFSSDGKTLAFD-SDGGTIKLWYIDIETG 730

Query: 293 ATER-LTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              R L+        S S+S D   +   S     + + +      ++ R          
Sbjct: 731 KEIRTLSEWNRGCVYSVSFSNDGKTLATGS---ADKTIKLWNVETGEEIRTLSGHNGKVN 787

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
              +S  G  +A T  + +   +  ++  G + R L   +  + + ++   G++L     
Sbjct: 788 SVSFSSDGKTLA-TGSADKTIKLWNVET-GKEIRTLSGHNGEVHSVSFRSDGKTLA---S 842

Query: 410 KDGDTGSKLYSI 421
              D   KL+++
Sbjct: 843 GSSDNTIKLWNV 854



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 110/297 (37%), Gaps = 33/297 (11%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEKG 171
            G+ +  G D   +E  LW+V   K++      +S    +     I  +  +Y+      G
Sbjct: 879  GKTLATGSDDTTIE--LWNVGTGKEMRTLIGHNSTGLCQL---EICSELAVYRVSFSPDG 933

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
                      +++ +    N++ + + +           + I+    FSP+ + +A  ++
Sbjct: 934  ----------KTLATSSDDNTIKLWNVETGQEIGTLRGHNGIVLSVSFSPDGKSLATGSW 983

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D      + L +    +  + +    S + +  FS +GK  + S   D+ + ++  D+++
Sbjct: 984  DK----TIKLWNVETGQEIRTLKGHDSSVYSVNFSPDGKTLV-SGSVDKTIKLW--DVET 1036

Query: 292  NATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                R L+       S S+S D   +      +G   + +   +   + R     +   F
Sbjct: 1037 GKEIRTLSGHNSYVSSVSFSSDGKTLA-TGSYDGT--IKLWNGSTGQEIRTLSGHDGYVF 1093

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
               +S  G  +A          I +   +  +E   +   D  + + ++S  G++L 
Sbjct: 1094 SVSFSSDGKTLATGSEDKT---IKLWDVETGEEIRTLSGHDGYVFSVSFSSDGKTLA 1147



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 87/231 (37%), Gaps = 19/231 (8%)

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             +  ++   FSP+ + +A ++ D+     + L +    +    +     ++L+  FS +G
Sbjct: 920  SELAVYRVSFSPDGKTLATSSDDN----TIKLWNVETGQEIGTLRGHNGIVLSVSFSPDG 975

Query: 270  KRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            K    +   D+ + ++  ++++    R L        S ++SPD   +V  S     + +
Sbjct: 976  KSLA-TGSWDKTIKLW--NVETGQEIRTLKGHDSSVYSVNFSPDGKTLVSGSV---DKTI 1029

Query: 329  YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
             +       + R      +      +S  G  +A   + G    I +      QE   + 
Sbjct: 1030 KLWDVETGKEIRTLSGHNSYVSSVSFSSDGKTLATGSYDGT---IKLWNGSTGQEIRTLS 1086

Query: 388  -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              D  + + ++S  G++L    +   D   KL+ ++      TL     Y 
Sbjct: 1087 GHDGYVFSVSFSSDGKTLATGSE---DKTIKLWDVETGEEIRTLSGHDGYV 1134



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 67/183 (36%), Gaps = 15/183 (8%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYS 310
           R+    S + +  FS +GK    +   D  + ++  D+++    R L+       S S+S
Sbjct: 565 RLEGHNSRVNSVSFSRDGKTLA-TGSDDGTIKLW--DVETGQEIRTLSGHNGKVNSVSFS 621

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +   S+    + + +      ++       +   F   +S  G  +A     G  
Sbjct: 622 PDGKTLATGSE---DKTIKLWNVETGEEIGTLSGHDGYVFSVSFSRDGKTLATGSDDGT- 677

Query: 371 FAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             I +   +  QE   +      + + ++S  G++L F          KL+ ID+    E
Sbjct: 678 --IKLWDVETGQEIRTLSGHNGKVNSVSFSSDGKTLAFDSD---GGTIKLWYIDIETGKE 732

Query: 429 TLI 431
              
Sbjct: 733 IRT 735



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 89/263 (33%), Gaps = 29/263 (11%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ +G    ++ + + +           +  +    F  + + +A  + D+     + L
Sbjct: 796  KTLATGSADKTIKLWNVETGKEIRTLSGHNGEVHSVSFRSDGKTLASGSSDN----TIKL 851

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +       + +    S + +  FSS+GK    +   D  +++++V         L    
Sbjct: 852  WNVETSLEIRTLYGHNSTVFSVSFSSDGKTLA-TGSDDTTIELWNV-GTGKEMRTLIGHN 909

Query: 302  FIN------------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                              S+SPD   +   SD      + +       +    +      
Sbjct: 910  STGLCQLEICSELAVYRVSFSPDGKTLATSSD---DNTIKLWNVETGQEIGTLRGHNGIV 966

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFS 407
                +SP G  +A   +      I +   +  QE   +   DS++ +  +SP G++L+  
Sbjct: 967  LSVSFSPDGKSLATGSWDKT---IKLWNVETGQEIRTLKGHDSSVYSVNFSPDGKTLV-- 1021

Query: 408  RKKDGDTGSKLYSIDLNGRNETL 430
                 D   KL+ ++      TL
Sbjct: 1022 -SGSVDKTIKLWDVETGKEIRTL 1043



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 57/175 (32%), Gaps = 36/175 (20%)

Query: 111  LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
            LV+G V K          +LWDV+  K+I                H          +  K
Sbjct: 1020 LVSGSVDKT--------IKLWDVETGKEIRTLS-----------GHNSYVSSVSFSSDGK 1060

Query: 171  GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
                        ++ +G    ++ + +             D  +F   FS + + +A  +
Sbjct: 1061 ------------TLATGSYDGTIKLWNGSTGQEIRTLSGHDGYVFSVSFSSDGKTLATGS 1108

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             D      + L D       + +      + +  FSS+GK    +  +D+ + ++
Sbjct: 1109 EDK----TIKLWDVETGEEIRTLSGHDGYVFSVSFSSDGKTLA-TGSEDKTIKLW 1158


>gi|269928695|ref|YP_003321016.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269788052|gb|ACZ40194.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 647

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 65/174 (37%), Gaps = 32/174 (18%)

Query: 263 PRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P+ S +G+R   +++            I+ V        + T   + +    +SPD  ++
Sbjct: 28  PQISPDGERIAFTLRPVSKEKEHPESAIWVVSFAGGEPRQFTAGQWDDEEPRWSPDGRRL 87

Query: 317 VFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------- 363
            F SDR   GK+ +Y+M ++G + +R+  D++       WSP G  +A            
Sbjct: 88  AFLSDRAERGKKSVYIMPADGGEARRV-FDQQGDMEQLSWSPDGRFLAVLFTDPETEEEK 146

Query: 364 --------TKFSGEKF---AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
                    +     +    + V+  +    + +  E   +    WSP G  L 
Sbjct: 147 KRKEERDDARVWDTDYKYQRLWVIDVEAGTAKAVSPEGRQVWTYAWSPDGERLA 200



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/297 (17%), Positives = 105/297 (35%), Gaps = 40/297 (13%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           + + H    D   S  GE+  F  R +    S      ++++ V+   G   R  T  + 
Sbjct: 18  QLVTHRRPSDPQISPDGERIAFTLRPV----SKEKEHPESAIWVVSFAGGEPRQFTAGQW 73

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
               EPR+SP+ +++A+ +   E   +   +        +R+ + +  +    +S +G+ 
Sbjct: 74  D-DEEPRWSPDGRRLAFLSDRAERGKKSVYIMPADGGEARRVFDQQGDMEQLSWSPDGRF 132

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +     E  +                    + +  +  D             ++L+V+
Sbjct: 133 LAVLFTDPETEEEKK------------RKEERDDARVWDTDYKY----------QRLWVI 170

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----TKFSGEKF---AIGVMKKDGSQER 384
                  K +S +    +    WSP G+ +A     T    + F    + ++ + G    
Sbjct: 171 DVEAGTAKAVSPEGRQVWTY-AWSPDGERLALNLTPTPRIDDIFLENEVVIVPRAGGDPT 229

Query: 385 LLVED-SNLQAPTWSPSGRSLIFSRKKDGD--TGSKLYSIDLNGRNETLINTPAYAS 438
            +       +  TWS  G+ L + R + G    G  +Y I + G  E +  TP Y  
Sbjct: 230 PVFRQIGMAEHLTWSQDGKYLAY-RARAGRVVHGDYVYRIPVEG-GEPVCLTPGYDG 284



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 8/103 (7%)

Query: 350 FDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGR 402
            DP  SP G+ IAFT           + AI V+   G + R       + + P WSP GR
Sbjct: 26  SDPQISPDGERIAFTLRPVSKEKEHPESAIWVVSFAGGEPRQFTAGQWDDEEPRWSPDGR 85

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTPAYASDPQWVG 444
            L F   +       +Y +  +G     + +         W  
Sbjct: 86  RLAFLSDRAERGKKSVYIMPADGGEARRVFDQQGDMEQLSWSP 128



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 21/65 (32%), Gaps = 5/65 (7%)

Query: 385 LLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSIDLNGRNETLINTPAYAS-D 439
            LV       P  SP G  + F+     K+     S ++ +   G          +   +
Sbjct: 18  QLVTHRRPSDPQISPDGERIAFTLRPVSKEKEHPESAIWVVSFAGGEPRQFTAGQWDDEE 77

Query: 440 PQWVG 444
           P+W  
Sbjct: 78  PRWSP 82


>gi|301164717|emb|CBW24276.1| putative exported peptidase [Bacteroides fragilis 638R]
          Length = 1095

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 59/302 (19%), Positives = 115/302 (38%), Gaps = 40/302 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ E G FN        +  S   K    V       +R+L+ + +  L    +  +
Sbjct: 231 FYYLSEENGTFN----VYQHTPGSDTSK---QVTHHKQHPVRFLSMASNGNLC---YGFD 280

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +    A       + V ++  R D+   R             S +GK     ++ D   
Sbjct: 281 GEIYTLAPGGKPQKVSVKILSDRNDKDLIRQIKTSGATEM-AVSPDGKEVAFILRGD--- 336

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   ++   T+++TNT        ++PD   +V+ S+R G  QLY       D+K+ +
Sbjct: 337 -VYVTSVEYKTTKQVTNTPCQERGIDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKQFT 395

Query: 343 Q----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                      + + + F+P +SP G  IAF +      AI V+     + R +++    
Sbjct: 396 YATELKEERLTNSDIASFNPKYSPDGKEIAFLENRT---AIRVINLKTKKVRTVMDAQYQ 452

Query: 393 QAPT-------WSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP--Q 441
            + +       WSP  + ++  F     G     +  ++ +G+ E    T +  SD   +
Sbjct: 453 YSYSDGDQWFEWSPDSKWILSEFI-GIGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAK 511

Query: 442 WV 443
           WV
Sbjct: 512 WV 513



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 71/204 (34%), Gaps = 30/204 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    I++V +      ++T     + +  +SPDS QI F SDR 
Sbjct: 30  AISPDGTTIAFTYKGD----IFTVPVSGGKATQITTNPAFDTTPIWSPDSKQIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKF- 371
           G   ++++  +G + +R++           ++  G  I FT             S  +F 
Sbjct: 86  GSMDVFIVSKDGGEPRRLTT-FSGGETPVAFTDAG-HILFTADIMPSTEDAGFPSNGQFQ 143

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---------IFSRKKDGDTGSKLYSID 422
            I  +   G +  ++     ++  + +  G  L          + + +       ++ + 
Sbjct: 144 QIYQIPVSGGRP-VMFSSMPMECISINKEGTILYQDKKGYEDYWRKHQKSPIARDIWMLR 202

Query: 423 L--NGRNETLINTPAYASDPQWVG 444
                R E          +P W  
Sbjct: 203 PGQTPRYEKQTTFIGEDREPVWAP 226



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 82/236 (34%), Gaps = 35/236 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V +          +I    +    P +S + K+   +  
Sbjct: 30  AISPDGTTIAFTY--KGDIFTVPV----SGGKATQITTNPAFDTTPIWSPDSKQIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGK- 325
           +  +MD++ V        RLT         +++ D+  I+F +D             G+ 
Sbjct: 84  RMGSMDVFIVSKDGGEPRRLTTFSGGETPVAFT-DAGHILFTADIMPSTEDAGFPSNGQF 142

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIG 374
           +Q+Y +  +G      S            + +G ++   K   E +            I 
Sbjct: 143 QQIYQIPVSGGRPVMFSSMP---MECISINKEGTILYQDKKGYEDYWRKHQKSPIARDIW 199

Query: 375 VMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +++   +   E+        + P W+P G+S  +  +++G      ++   +   +
Sbjct: 200 MLRPGQTPRYEKQTTFIGEDREPVWAPDGKSFYYLSEENGTFNVYQHTPGSDTSKQ 255



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 89/241 (36%), Gaps = 30/241 (12%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPK--RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           Y     +  +   +   R  + P+  +   F      P ++ +GK      +++   ++Y
Sbjct: 185 YWRKHQKSPIARDIWMLRPGQTPRYEKQTTFIGEDREPVWAPDGKSFYYLSEENGTFNVY 244

Query: 286 SVDLQSNATERLTNTL---------FINISASYSPDSSQIVFESDREGKEQLYVMQ--SN 334
                S+ ++++T+             N +  Y  D    ++     GK Q   ++  S+
Sbjct: 245 QHTPGSDTSKQVTHHKQHPVRFLSMASNGNLCYGFDGE--IYTLAPGGKPQKVSVKILSD 302

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQ 393
            +D+  I Q K +   +   SP G  +AF         + V   +    + +       +
Sbjct: 303 RNDKDLIRQIKTSGATEMAVSPDGKEVAFILRGD----VYVTSVEYKTTKQVTNTPCQER 358

Query: 394 APTWSPSGRSLIFSRKKDG----------DTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              ++P GR+L+++ ++ G              K ++     + E L N+   + +P++ 
Sbjct: 359 GIDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKQFTYATELKEERLTNSDIASFNPKYS 418

Query: 444 G 444
            
Sbjct: 419 P 419



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 9/99 (9%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSR 408
                SP G  IAFT        I  +   G +  ++    +    P WSP  + + F+ 
Sbjct: 27  RHCAISPDGTTIAFTYKGD----IFTVPVSGGKATQITTNPAFDTTPIWSPDSKQIAFAS 82

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
            + G     ++ +  +G     + T +    P  V F D
Sbjct: 83  DRMGSM--DVFIVSKDGGEPRRLTTFSGGETP--VAFTD 117



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 88/278 (31%), Gaps = 38/278 (13%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    + ++   K  +  +   G     +T         P +SP+ +++A+A+     + 
Sbjct: 31  ISPDGTTIAFTYKGDIFTVPVSGGKATQITT-NPAFDTTPIWSPDSKQIAFASDRMGSMD 89

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV------------QKDEAMDIY 285
               + ++    P+R+  F        F ++    L +                +   IY
Sbjct: 90  --VFIVSKDGGEPRRLTTFSGGETPVAF-TDAGHILFTADIMPSTEDAGFPSNGQFQQIY 146

Query: 286 SVDLQSNATERLTNTL----FINISASYSPDSSQIV--FESDREGKE---QLYVMQSNGS 336
            + +        ++       IN   +      +    +    +       +++++   +
Sbjct: 147 QIPVSGGRPVMFSSMPMECISINKEGTILYQDKKGYEDYWRKHQKSPIARDIWMLRPGQT 206

Query: 337 D--QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              +K+ +   E    +PVW+P G    +       F +          + +    + Q 
Sbjct: 207 PRYEKQTTFIGE--DREPVWAPDGKSFYYLSEENGTFNVYQHTPGSDTSKQVTH--HKQH 262

Query: 395 PTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNGRNETL 430
           P      R L  +   +       ++Y++   G+ + +
Sbjct: 263 PV-----RFLSMASNGNLCYGFDGEIYTLAPGGKPQKV 295



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 59/170 (34%), Gaps = 23/170 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDT----------RIDRAPKRIGNFRSMILAPRFSSN 268
           F+P+ + + YA+ +   + ++Y                +   +R+ N       P++S +
Sbjct: 362 FAPDGRTLVYAS-ERGGLWQLYTSTIVRKDEKQFTYATELKEERLTNSDIASFNPKYSPD 420

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN------TLFINISASYSPDSSQIV--FES 320
           GK       +     I  ++L++     + +          +    +SPDS  I+  F  
Sbjct: 421 GKEIAFLENR---TAIRVINLKTKKVRTVMDAQYQYSYSDGDQWFEWSPDSKWILSEFIG 477

Query: 321 DREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                 + + ++ ++G  +     +   S  +  W   G  + +      
Sbjct: 478 IGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAKWVLGGKAMVWFSDRAG 527



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 46/123 (37%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F P++SP+ +++A+        ++ +     R     +   ++        +
Sbjct: 405 LTNSDIASFNPKYSPDGKEIAFLENRTAIRVINLKTKKVRTVMDAQYQYSYSDGDQWFEW 464

Query: 266 SSNGKRA---LISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K      I +      DI  ++         LT + + + +A +      +V+ SD
Sbjct: 465 SPDSKWILSEFIGIGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAKWVLGGKAMVWFSD 524

Query: 322 REG 324
           R G
Sbjct: 525 RAG 527



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           ++    SP G ++ F+ K        ++++ ++G   T I T PA+ + P W  
Sbjct: 26  MRHCAISPDGTTIAFTYK------GDIFTVPVSGGKATQITTNPAFDTTPIWSP 73


>gi|269837974|ref|YP_003320202.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269787237|gb|ACZ39380.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 652

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 94/277 (33%), Gaps = 51/277 (18%)

Query: 219 FSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            SP+ + VAY     + + E  +    +       P+R+    +   APR+S +G+R   
Sbjct: 23  ISPDGRHVAYVTAPASKEGEHPVSAIWLVAADGGTPRRLTTSEAADGAPRWSPDGRRLAF 82

Query: 275 SVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-------- 324
              +       +Y +DL      R+T        A++SPD S + + +            
Sbjct: 83  VSDRLERGKPQVYVLDLAGGEAVRVTAAEGGVGQAAWSPDGSLLAYTAMDAETEEEKRRR 142

Query: 325 --------------KEQLYVMQSNGS----------DQKRISQDKEA----SYFDPVWSP 356
                         +  L+V+    +          + +RIS +       +     W+P
Sbjct: 143 EERDDARLVDADVKRASLWVIAVPEATAAIDPNALPEPRRISPEGIHIGTEADAGFTWAP 202

Query: 357 QGD-LIAFTKFSGEKF-----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            G   +       +        + ++  DG    L   +  L AP +SP G++L F   +
Sbjct: 203 DGKSFVVLASPDPKAHYTFAPEMAILSLDGELRSLGRFEGLLTAPKFSPDGKTLAFVAAE 262

Query: 411 DG-DTGSKLYSIDLNGRNETLINTP--AYASDPQWVG 444
           +       L ++  +G    ++         D  W+ 
Sbjct: 263 EVMPAFFSLQTMPASGGQPHIVAPGFEGSFRDFHWLP 299



 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 87/245 (35%), Gaps = 57/245 (23%)

Query: 258 SMILAPRFSSNGKRALIS---VQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSP 311
           +++   + S +G+          K+       I+ V        RLT +   + +  +SP
Sbjct: 16  TLVTDVQISPDGRHVAYVTAPASKEGEHPVSAIWLVAADGGTPRRLTTSEAADGAPRWSP 75

Query: 312 DSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--- 366
           D  ++ F SDR   GK Q+YV+   G +  R++   E       WSP G L+A+T     
Sbjct: 76  DGRRLAFVSDRLERGKPQVYVLDLAGGEAVRVT-AAEGGVGQAAWSPDGSLLAYTAMDAE 134

Query: 367 ----------------------SGEKFAIGVMKKDGS-------QERLLVEDS------N 391
                                     + I V +   +       + R +  +        
Sbjct: 135 TEEEKRRREERDDARLVDADVKRASLWVIAVPEATAAIDPNALPEPRRISPEGIHIGTEA 194

Query: 392 LQAPTWSPSGRSLIFSRKKDGD----TGSKLYSIDLN------GRNETLINTPAYASDPQ 441
               TW+P G+S +     D         ++  + L+      GR E L+  P ++ D +
Sbjct: 195 DAGFTWAPDGKSFVVLASPDPKAHYTFAPEMAILSLDGELRSLGRFEGLLTAPKFSPDGK 254

Query: 442 WVGFM 446
            + F+
Sbjct: 255 TLAFV 259



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 86/261 (32%), Gaps = 51/261 (19%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + ++  DG   R LT S +     PR+SP+ +++A+ +   E       +         R
Sbjct: 48  IWLVAADGGTPRRLTTS-EAADGAPRWSPDGRRLAFVSDRLERGKPQVYVLDLAGGEAVR 106

Query: 253 IGNFRSMILAPRFSSNGKRALISV----------QKDEAMDIYSVDLQSN---------- 292
           +      +    +S +G     +           +++E  D   VD              
Sbjct: 107 VTAAEGGVGQAAWSPDGSLLAYTAMDAETEEEKRRREERDDARLVDADVKRASLWVIAVP 166

Query: 293 ------------ATERLT-NTLFINISA----SYSPDSSQIVFESDREGK------EQLY 329
                          R++   + I   A    +++PD    V  +  + K       ++ 
Sbjct: 167 EATAAIDPNALPEPRRISPEGIHIGTEADAGFTWAPDGKSFVVLASPDPKAHYTFAPEMA 226

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMKKDGSQERLL 386
           ++  +G  + R     E     P +SP G  +AF          F++  M   G Q  ++
Sbjct: 227 ILSLDG--ELRSLGRFEGLLTAPKFSPDGKTLAFVAAEEVMPAFFSLQTMPASGGQPHIV 284

Query: 387 VED--SNLQAPTWSPSGRSLI 405
                 + +   W P G  ++
Sbjct: 285 APGFEGSFRDFHWLPDGERIV 305



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 57/316 (18%), Positives = 102/316 (32%), Gaps = 53/316 (16%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+ FVS+ +  G  K  + V+D  G     +T   +  + +  +SP+   +AY   D E 
Sbjct: 79  RLAFVSDRLERG--KPQVYVLDLAGGEAVRVTA-AEGGVGQAAWSPDGSLLAYTAMDAET 135

Query: 236 ILRVYL------------------------------MDTRIDRAPKRIGNFRSMIL---- 261
                                               +D      P+RI      I     
Sbjct: 136 EEEKRRREERDDARLVDADVKRASLWVIAVPEATAAIDPNALPEPRRISPEGIHIGTEAD 195

Query: 262 -APRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               ++ +GK  ++    D       A ++  + L       L     +  +  +SPD  
Sbjct: 196 AGFTWAPDGKSFVVLASPDPKAHYTFAPEMAILSLD-GELRSLGRFEGLLTAPKFSPDGK 254

Query: 315 QIVFESDREGKEQLY---VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            + F +  E     +    M ++G     ++   E S+ D  W P G+ I  +   G++ 
Sbjct: 255 TLAFVAAEEVMPAFFSLQTMPASGGQPHIVAPGFEGSFRDFHWLPDGERIVTSVEMGQQV 314

Query: 372 AIGVMKKDGSQERLLVED----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            + V      +             + A   S SG    F    D   G  +Y+ DL G  
Sbjct: 315 TVKVFNLTSGEVSDAFAPFERVGVVTAFRLSASGDRAAFVYAHDESYG-DVYAADLGGEP 373

Query: 428 ETLINTPAYASDPQWV 443
             L +   +  D +W 
Sbjct: 374 RRLTDLNPWTRDYEWG 389


>gi|213028842|ref|ZP_03343289.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 117

 Score =  106 bits (264), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 38/97 (39%), Gaps = 3/97 (3%)

Query: 32  IHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ 89
           +HA V++       +  P+ +   K+         +  +V+ DL+ S  FN + +    Q
Sbjct: 1   MHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVAADLRNSGKFNPLDRSRLPQ 60

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV 126
           +      + +   W++LG   ++ G V         +
Sbjct: 61  QPATAQEV-QPTAWSALGIDAVIVGLVTPNPDGSYNL 96


>gi|242072218|ref|XP_002446045.1| hypothetical protein SORBIDRAFT_06g000930 [Sorghum bicolor]
 gi|241937228|gb|EES10373.1| hypothetical protein SORBIDRAFT_06g000930 [Sorghum bicolor]
          Length = 730

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 98/294 (33%), Gaps = 69/294 (23%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS--SNGKRAL 273
            P  S +  K+A+   + + +        R+    K        I AP ++   +     
Sbjct: 396 FPTISNDGSKLAFVDNEFKAVWVADSQGLRVVYETK----GPDNIFAPMWNQNPDKDILY 451

Query: 274 ISVQKDEAM-------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           + +              I +V   +    +LT   F N   S SPD S+ VF S R+G +
Sbjct: 452 VCMGPSFNAGKPLEICAIPNVSSGTRQRRQLTKGKFNNAFPSSSPDGSRFVFRSTRDGGD 511

Query: 327 ----QLYVM------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-------- 368
                LY+       + +G    R++ + E +     WSP+GD I F+            
Sbjct: 512 KKHKNLYIAEDAEVGEYSGGTVTRLT-NGEWTDTHCQWSPRGDWIVFSSTRDKPKDAPEL 570

Query: 369 ------EKFAIGVMKKD--GSQERLLVE----DSNLQAPTWSPSGRSLIFSRK------- 409
                   +A+ ++K        R++        ++  P +SP GRS+  +         
Sbjct: 571 DNGLDSGYYAVFMVKVSDPTVVIRVVQSGDDLGGHVNHPVFSPDGRSIAMTADLAAVSAD 630

Query: 410 --------KDGDTGSKLYSIDLN----------GRNETLINTPAYASDPQWVGF 445
                           ++ +D++           +   + ++    S P W  F
Sbjct: 631 PISLPLFIHSVRPYGDIFVVDIDPDDARKNKDVKKFHRVTHSRYEYSTPAWTMF 684



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 45/173 (26%), Gaps = 34/173 (19%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR--------IDRAPK 251
           G   R            P  SP+  +  + +  D    +   +                 
Sbjct: 475 GTRQRRQLTKGKFNNAFPSSSPDGSRFVFRSTRDGGDKKHKNLYIAEDAEVGEYSGGTVT 534

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+ N        ++S  G   + S  +D+  D   +D              ++       
Sbjct: 535 RLTNGEWTDTHCQWSPRGDWIVFSSTRDKPKDAPELD------------NGLDS------ 576

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
                VF         +  +  +G D              PV+SP G  IA T
Sbjct: 577 -GYYAVFMVKVSDPTVVIRVVQSGDDL-------GGHVNHPVFSPDGRSIAMT 621



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 71/175 (40%), Gaps = 18/175 (10%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---------EGKEQ 327
           ++     +Y  +L++  TERLT     ++S + SP   ++   + R         + +  
Sbjct: 164 RRSPWTVVYKTNLRTGKTERLTPKGQFDLSPAVSPSGKKVAMATFRPEGWEGEIEDLQTD 223

Query: 328 LYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERL 385
           ++VM       +KR+ ++       P W+   D+I F +  G+ + +       ++  R+
Sbjct: 224 IFVMNVERPPMRKRLIKNG----GWPSWASD-DVIFFHRKVGDTWGVFRHDTRTNETVRV 278

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             E  +   P  + S   +  +  +     + +  ++   R+  + +T A A  P
Sbjct: 279 TPEAFDAVTPA-AISETKVAVATIRQKSKFTDV-RVEAQYRHIEIFDTAAGAGQP 331



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 49/154 (31%), Gaps = 14/154 (9%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---------DEAM 282
           +      V           +R+       L+P  S +GK+  ++  +         D   
Sbjct: 163 ERRSPWTVVYKTNLRTGKTERLTPKGQFDLSPAVSPSGKKVAMATFRPEGWEGEIEDLQT 222

Query: 283 DIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           DI+ ++++      RL          S++ D   I F         ++   +  ++  R+
Sbjct: 223 DIFVMNVERPPMRKRLIKNGGW---PSWASD-DVIFFHRKVGDTWGVFRHDTRTNETVRV 278

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + +   +      S     +A  +   +   + V
Sbjct: 279 TPEAFDAVTPAAISETKVAVATIRQKSKFTDVRV 312


>gi|257093786|ref|YP_003167427.1| YD repeat-containing protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257046310|gb|ACV35498.1| YD repeat protein [Candidatus Accumulibacter phosphatis clade IIA
           str. UW-1]
          Length = 750

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 52/310 (16%), Positives = 109/310 (35%), Gaps = 15/310 (4%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D +QI+      +   WR         + +    EK  +++        VV+  +  ++ 
Sbjct: 387 DGQQIVTAARDGTARLWRVSGDEGQARVLRG--HEKPVWSAEFSPDGRHVVTTSLDGTVR 444

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +    G     +            FSP+ + VA ++ DD     V L        P+ + 
Sbjct: 445 LWPTAGDGEALVWRGHTWPAGHAVFSPDGRWVASSSLDD----TVRLWPVGDHAQPRVLQ 500

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                + A  FS + +R   S   D  + ++SVD  S     L        S ++SPD  
Sbjct: 501 GHTGWVRAAAFSPDSRRLA-SASADGTVRLWSVD-GSAEPLVLRGHGGQVSSVAFSPDGK 558

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              F         + +  ++G     + +    +  + V+SP G L+      G    + 
Sbjct: 559 ---FVVTAARDNTVRIWPADGQGGPLVLRGHGDAVSNVVFSPDGTLVGSASADGTA-RVW 614

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            +   G+   L    +++ +  +SP  R ++ + +   D  ++++  D  G+   L    
Sbjct: 615 RVDGRGTPVILRSHQASVTSIAFSPDSRRVLTASR---DGTARVWPADGKGQEIVLRGHR 671

Query: 435 AYASDPQWVG 444
              +   +  
Sbjct: 672 GAVTSAAFSP 681



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 102/273 (37%), Gaps = 28/273 (10%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             VV+     +  +   DG+    +       +    FS + +++  A+ D      V L
Sbjct: 223 RQVVTASADATARLWHSDGSGQPIIQRGHTDQVLSAAFSGDGKRLLTASLDG----TVRL 278

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                      +G  R  +    FS +G+   I    DE   ++   L       L    
Sbjct: 279 WPVDGQGEADVLGENRGPVRQASFSPDGRWVAIVA-ADETARLW--PLNGGQPVVLRGHA 335

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              +SA++S DS++++  ++ +G  +++ ++++   +  +    E   +   +SP G  I
Sbjct: 336 APVLSAAFSADSTRLITTAE-DGTARIWPLEAS---EPVVLHGHEGPIWRAAFSPDGQQI 391

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS----PSGRSLIFSRKKDGDTGSK 417
                 G    +  +  D  Q R+L      + P WS    P GR ++ +     D   +
Sbjct: 392 VTAARDGTA-RLWRVSGDEGQARVL---RGHEKPVWSAEFSPDGRHVVTTSL---DGTVR 444

Query: 418 LYSIDLNG-----RNETLINTPA-YASDPQWVG 444
           L+    +G     R  T     A ++ D +WV 
Sbjct: 445 LWPTAGDGEALVWRGHTWPAGHAVFSPDGRWVA 477



 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 95/285 (33%), Gaps = 20/285 (7%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E+G  ++        + +      + +   DG+         D  L    FSP+ + + 
Sbjct: 38  HEQGVTSASFSPDGRQIATTSRDGKVNLWPADGSGRARTLSIADGPLASAAFSPDGRHLL 97

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQKDEAMDIY 285
               +  +   V +  T     P    N        A  FS +G+R +++   D    I+
Sbjct: 98  VTPLEHGN---VQVWPTAAGGGPVNPVNLGDTARLRAAAFSPDGQRVVVAYD-DGLARIW 153

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             D    A   L    +  +SA++S D  Q+V  + R+G  +L+   +       +    
Sbjct: 154 PAD-GHGAPILLKGHTWQVLSAAFSADGRQVV-TASRDGTARLW--SAADGKLLAVLDGH 209

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                   +SP G  +           +      G           + +  +S  G+ L+
Sbjct: 210 AGPVLAASFSPDGRQVVTASADATA-RLWHSDGSGQPIIQRGHTDQVLSAAFSGDGKRLL 268

Query: 406 FSRKKDGDTGSKLYSIDLN------GRNETLINTPAYASDPQWVG 444
            +     D   +L+ +D        G N   +   +++ D +WV 
Sbjct: 269 TASL---DGTVRLWPVDGQGEADVLGENRGPVRQASFSPDGRWVA 310



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 83/228 (36%), Gaps = 10/228 (4%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V S  + +++ +          +       +    FSP+ +++A A+ D      V L  
Sbjct: 476 VASSSLDDTVRLWPVGDHAQPRVLQGHTGWVRAAAFSPDSRRLASASADG----TVRLWS 531

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                 P  +      + +  FS +GK  +++  +D  + I+  D Q      L      
Sbjct: 532 VDGSAEPLVLRGHGGQVSSVAFSPDGKF-VVTAARDNTVRIWPADGQGGPLV-LRGHGDA 589

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +  +SPD + +V  +  +G  +++ +  +G     I +  +AS     +SP    +  
Sbjct: 590 VSNVVFSPDGT-LVGSASADGTARVWRV--DGRGTPVILRSHQASVTSIAFSPDSRRVLT 646

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
               G    +      G +  L      + +  +SP G  ++ + +  
Sbjct: 647 ASRDGTA-RVWPADGKGQEIVLRGHRGAVTSAAFSPDGSHVVTASRDG 693



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 86/223 (38%), Gaps = 16/223 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    +Q +    FSP+ +++A  + D +    V L         + +      + +  F
Sbjct: 34  VLKGHEQGVTSASFSPDGRQIATTSRDGK----VNLWPADGSGRARTLSIADGPLASAAF 89

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISASYSPDSSQIVFESDRE 323
           S +G+  L++  +   + ++             L +T     +A++SPD  ++V   D +
Sbjct: 90  SPDGRHLLVTPLEHGNVQVWPTAAGGGPVNPVNLGDT-ARLRAAAFSPDGQRVVVAYD-D 147

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  +++   ++G     + +          +S  G  +      G    +     DG   
Sbjct: 148 GLARIW--PADGHGAPILLKGHTWQVLSAAFSADGRQVVTASRDGTA-RLW-SAADGKLL 203

Query: 384 RLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +L      + A ++SP GR ++ +     D  ++L+  D +G
Sbjct: 204 AVLDGHAGPVLAASFSPDGRQVVTAS---ADATARLWHSDGSG 243



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 76/207 (36%), Gaps = 7/207 (3%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            +D    +RV             +      + +  FS +G++   +  +D  ++++  D 
Sbjct: 12  RHDPLGGVRVARQVAEQLLPLNVLKGHEQGVTSASFSPDGRQIA-TTSRDGKVNLWPADG 70

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
              A   L+       SA++SPD   ++      G  Q++   + G     ++    A  
Sbjct: 71  SGRART-LSIADGPLASAAFSPDGRHLLVTPLEHGNVQVWPTAAGGGPVNPVNLGDTARL 129

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               +SP G  +    +      I      G+   L      + +  +S  GR ++ + +
Sbjct: 130 RAAAFSPDGQRVV-VAYDDGLARIWPADGHGAPILLKGHTWQVLSAAFSADGRQVVTASR 188

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAY 436
              D  ++L+S   +G+   +++  A 
Sbjct: 189 ---DGTARLWSA-ADGKLLAVLDGHAG 211



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 70/195 (35%), Gaps = 9/195 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + S     ++ +   DG+    +       +    FSP+ + V  A  D+     V 
Sbjct: 515 SRRLASASADGTVRLWSVDGSAEPLVLRGHGGQVSSVAFSPDGKFVVTAARDN----TVR 570

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +        P  +      +    FS +G   + S   D    ++ VD +      L + 
Sbjct: 571 IWPADGQGGPLVLRGHGDAVSNVVFSPDGT-LVGSASADGTARVWRVDGRGTPVI-LRSH 628

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD S+ V  + R+G  +++   ++G  Q+ + +    +     +SP G  
Sbjct: 629 QASVTSIAFSPD-SRRVLTASRDGTARVW--PADGKGQEIVLRGHRGAVTSAAFSPDGSH 685

Query: 361 IAFTKFSGEKFAIGV 375
           +      G      V
Sbjct: 686 VVTASRDGTARYWRV 700


>gi|209966436|ref|YP_002299351.1| acylaminoacyl peptidase, putative [Rhodospirillum centenum SW]
 gi|209959902|gb|ACJ00539.1| acylaminoacyl peptidase, putative [Rhodospirillum centenum SW]
          Length = 710

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 92/284 (32%), Gaps = 57/284 (20%)

Query: 216 EPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +P+ SP+ +++ YA    +      +    +     R+ + +   R      R+S +G R
Sbjct: 53  DPQISPDGKQIVYARVGMDIMKDRAVPTLWVVDHEGRSHRPLLPGRVPASLARWSPDGGR 112

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------------ 319
                 +     I+   + +  T  +T+      + ++SPD   + F             
Sbjct: 113 IAYVQAEGGQRQIHVRWMDTGQTATVTHLTEDPDNLAWSPDGRWLAFTMLVKAEGKPLGT 172

Query: 320 -----------------------SD-----REGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                                  +D      +G+  L+V+ + G   ++++         
Sbjct: 173 MPPKPDGAEWAPKVKVVDSMVYRADGAGFLEQGRHHLFVVPAEGGTPRQLTSGDFDHRGQ 232

Query: 352 PVWSPQGDLIAFTKFSGEKFA--------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
           P W P G  I         +           V  KDG+   L         P  SP GR 
Sbjct: 233 PAWLPDGSAIIIAANRNPDWETDPLNQDLHEVSVKDGTIRTLTTRKGPDSDPAVSPDGRY 292

Query: 404 LIFSR---KKDGDTGSKLYSID-LNGRNETLINTPAYASD-PQW 442
           + F+    ++ G   S+L  +D   G   TL      + D P W
Sbjct: 293 IAFTGFEDQRRGYHNSRLSVLDRRTGEIRTLTEGLDRSVDAPAW 336



 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 98/274 (35%), Gaps = 33/274 (12%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G +  SL     DG  I Y+     Q     R+    Q        ++     +  D R 
Sbjct: 97  GRVPASLARWSPDGGRIAYVQAEGGQRQIHVRWMDTGQTATVTHLTEDPDNLAWSPDGRW 156

Query: 247 -------DRAPKRIGNFRSMILAPRFSSNGKRA-LISVQKDEAM-------DIYSVDLQS 291
                      K +G          ++   K    +  + D A         ++ V  + 
Sbjct: 157 LAFTMLVKAEGKPLGTMPPKPDGAEWAPKVKVVDSMVYRADGAGFLEQGRHHLFVVPAEG 216

Query: 292 NATERLTNTLFINIS-ASYSPDSSQIVFESDREG-------KEQLYVMQSNGSDQKRISQ 343
               +LT+  F +    ++ PD S I+  ++R          + L+ +       + ++ 
Sbjct: 217 GTPRQLTSGDFDHRGQPAWLPDGSAIIIAANRNPDWETDPLNQDLHEVSVKDGTIRTLTT 276

Query: 344 DKEASYFDPVWSPQGDLIAFT-----KFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPT 396
            K     DP  SP G  IAFT     +       + V+ +   + R L E  D ++ AP 
Sbjct: 277 RK-GPDSDPAVSPDGRYIAFTGFEDQRRGYHNSRLSVLDRRTGEIRTLTEGLDRSVDAPA 335

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           W+  G++++ S +  G+    L  I L+GR E L
Sbjct: 336 WTDEGKAILVSYEDRGNM--VLARIGLDGRREVL 367



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 102/322 (31%), Gaps = 68/322 (21%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
            RI +V         +  + V   D      +T   +       +SP+ + +A+      
Sbjct: 111 GRIAYVQAEGG----QRQIHVRWMDTGQTATVTHLTEDPDNL-AWSPDGRWLAFTMLVKA 165

Query: 232 -------------DDEDILRVYLMDTRI----------------------DRAPKRIGNF 256
                          E   +V ++D+ +                         P+++ + 
Sbjct: 166 EGKPLGTMPPKPDGAEWAPKVKVVDSMVYRADGAGFLEQGRHHLFVVPAEGGTPRQLTSG 225

Query: 257 R-SMILAPRFSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLTNTLFINISAS 308
                  P +  +G   +I+  ++          D++ V ++      LT     +   +
Sbjct: 226 DFDHRGQPAWLPDGSAIIIAANRNPDWETDPLNQDLHEVSVKDGTIRTLTTRKGPDSDPA 285

Query: 309 YSPDSSQIVFES---DREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            SPD   I F      R G    +L V+     + + +++  + S   P W+ +G  I  
Sbjct: 286 VSPDGRYIAFTGFEDQRRGYHNSRLSVLDRRTGEIRTLTEGLDRSVDAPAWTDEGKAILV 345

Query: 364 TKFSGEKFAIGVMKKDGSQERL--------LVEDSNLQAPTWSPSGRSLIFSRKKDG-DT 414
           +        +  +  DG +E L        L       + + S +GR   F+    G D 
Sbjct: 346 SYEDRGNMVLARIGLDGRREVLAEDLGGTTLDRPYTSGSFSVSRNGR---FAYTAAGPDR 402

Query: 415 GSKLYSIDLNGRNETLINTPAY 436
            + + + +  G    L +  A 
Sbjct: 403 PADVAAGEKAGAARRLTDLNAD 424



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 87/273 (31%), Gaps = 34/273 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI- 246
             ++ L V+  +G   R LT        +P + P+   +  A   + D     L      
Sbjct: 204 QGRHHLFVVPAEGGTPRQLTSGDFDHRGQPAWLPDGSAIIIAANRNPDWETDPLNQDLHE 263

Query: 247 ----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-----AMDIYSVDLQSNATERL 297
               D   + +   +     P  S +G+    +  +D+        +  +D ++     L
Sbjct: 264 VSVKDGTIRTLTTRKGPDSDPAVSPDGRYIAFTGFEDQRRGYHNSRLSVLDRRTGEIRTL 323

Query: 298 TNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNG------SDQKRISQDKEASYF 350
           T  L  ++   +++ +   I+   +  G   L  +  +G       D    + D+  +  
Sbjct: 324 TEGLDRSVDAPAWTDEGKAILVSYEDRGNMVLARIGLDGRREVLAEDLGGTTLDRPYTSG 383

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               S  G              +   +K G+  RL   +++             +   + 
Sbjct: 384 SFSVSRNGRFAYTAAGPDRPADVAAGEKAGAARRLTDLNAD-------------LLGNRA 430

Query: 411 DGDTGSKLYSIDLNGRNET--LINTPAYASDPQ 441
            G T +  +    +GR     LI  P +  DP 
Sbjct: 431 LGRTEALTWKSSADGREIQGWLITPPGF--DPA 461



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 14/109 (12%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQA-PTWSPSGR 402
            DP  SP G  I + +   +         + V+  +G   R L+      +   WSP G 
Sbjct: 52  RDPQISPDGKQIVYARVGMDIMKDRAVPTLWVVDHEGRSHRPLLPGRVPASLARWSPDGG 111

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLI------NTPAYASDPQWVGF 445
            + + + + G     +  +D  G+  T+       +  A++ D +W+ F
Sbjct: 112 RIAYVQAEGGQRQIHVRWMD-TGQTATVTHLTEDPDNLAWSPDGRWLAF 159


>gi|242816040|ref|XP_002486690.1| NACHT and WD40 domain protein [Talaromyces stipitatus ATCC 10500]
 gi|218715029|gb|EED14452.1| NACHT and WD40 domain protein [Talaromyces stipitatus ATCC 10500]
          Length = 1813

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 58/341 (17%), Positives = 117/341 (34%), Gaps = 28/341 (8%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKD---RKQIIGKKFFSSP----ASWRKIAHTISDDIYQSI 166
            GR++  G  + ++   LWD      ++ + G              R +A   SD   +  
Sbjct: 1117 GRLLALGSSQRKIT--LWDTATNALQQILEGHSQRIEAMEFSPDGRLLASGSSDKTVKLW 1174

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                G     +   S    SG       + D     ++    S  ++++   FS + + +
Sbjct: 1175 DTTSGALQKSLKGHSRLQGSGSNDTKFKLWDTATGLLQQTLDSHSKMVWSVAFSLDGRLL 1234

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            A  + D      V + DT      + + +   ++ +  FS +G   L S   D  + ++ 
Sbjct: 1235 ASGSADR----TVKIWDTSTGALKQTLEDHSDLVSSVVFSPDG-WMLASGSNDMTVKLW- 1288

Query: 287  VDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             D  + A  R L        S  +SPD   +   SD      + +  +     ++  +  
Sbjct: 1289 -DTSTGALRRTLGGHSEWVRSVVFSPDGRLLASGSD---DMTVKLWNTATGAPQQTLKGH 1344

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRS 403
                +   +SP G L+A     G    + +        +  +E     +++  +SP GR 
Sbjct: 1345 LERVWSVAFSPDGRLLASGAEDGT---VKLWDTATGALQQTLESHLEGVRSVAFSPDGRM 1401

Query: 404  LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            L        DT  KL+        +TL +  ++     +  
Sbjct: 1402 LASGSI---DTTVKLWDTATGDLQQTLEDHLSWVQSVAFSP 1439



 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 111/336 (33%), Gaps = 38/336 (11%)

Query: 120  GKDRLRVEFRLWDVKDR--KQIIG------KKFFSSPASWRKIAHTISDDIYQSITGEKG 171
                +    +LWD      +Q +       +    SP   R +A    D          G
Sbjct: 1403 ASGSIDTTVKLWDTATGDLQQTLEDHLSWVQSVAFSPDG-RLLASGSMDRTLNLWNTSSG 1461

Query: 172  D----FNSR-----ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
                 F        + F+S+  +      +  V   D   +R        ++    FSP+
Sbjct: 1462 ALQQTFMGHSCVLTVAFLSDGRLLASGSENSIVRLWDTGALRQTLEGHSDLVESVAFSPD 1521

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             + +A  ++D      V   DT      + +G   + + +  FS +G+    S   D  +
Sbjct: 1522 GRMLASGSHDM----TVKFWDTATGALQQTLGGHSNWVRSVVFSPDGRLLA-SGSDDMTV 1576

Query: 283  DIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             ++  +  + A ++ L   L    S  +S DS  +   S+      + +  +     ++ 
Sbjct: 1577 KLW--NTATGAPQQTLKGHLKRVWSVVFSLDSRLLASGSE---DGTIKIWDTATGALQQN 1631

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSP 399
             + +    +   +SP G ++A     G    + +        +  ++      +A  +SP
Sbjct: 1632 FEGRLERVWSVAFSPDGRMLASGSEDGT---VKLWDTATGTLQQTLDGHLERARAVAFSP 1688

Query: 400  SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
             GR L        D   KL+     G  +  + T  
Sbjct: 1689 DGRVLA---SGSKDMTVKLWDT-ATGALQQSLTTSG 1720



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/314 (16%), Positives = 109/314 (34%), Gaps = 42/314 (13%)

Query: 112  VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
            + G    +G      +F+LWD      ++ +   S       +A ++             
Sbjct: 1185 LKGHSRLQGSGSNDTKFKLWDTATG--LLQQTLDSHSKMVWSVAFSL------------- 1229

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
              + R+L       SG    ++ + D     ++        ++    FSP+   +A  + 
Sbjct: 1230 --DGRLL------ASGSADRTVKIWDTSTGALKQTLEDHSDLVSSVVFSPDGWMLASGSN 1281

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D      V L DT      + +G     + +  FS +G+    S   D  + ++  +  +
Sbjct: 1282 DM----TVKLWDTSTGALRRTLGGHSEWVRSVVFSPDGRLLA-SGSDDMTVKLW--NTAT 1334

Query: 292  NATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             A ++ L   L    S ++SPD   +      +G  +L+   +     ++  +       
Sbjct: 1335 GAPQQTLKGHLERVWSVAFSPDGRLLA-SGAEDGTVKLW--DTATGALQQTLESHLEGVR 1391

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSR 408
               +SP G ++A          + +        +  +ED  S +Q+  +SP GR L    
Sbjct: 1392 SVAFSPDGRMLASGSIDTT---VKLWDTATGDLQQTLEDHLSWVQSVAFSPDGRLLASGS 1448

Query: 409  KKDGDTGSKLYSID 422
                D    L++  
Sbjct: 1449 M---DRTLNLWNTS 1459



 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 91/252 (36%), Gaps = 18/252 (7%)

Query: 164  QSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            Q        +   + F  +     SG    ++ + D     ++    S    +    FS 
Sbjct: 888  QQTFEGHSHWVQSVAFSPDGRLLASGSADRTVKIWDTSTGALQQTLESHSDWVQLVTFSL 947

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + + +A  + D      + L DT      K   +    +LA  F  +G+    S  +D  
Sbjct: 948  DGRLLASGSRDR----TIKLWDTASGALQKTFESPLEWVLAVAFLPDGRLLA-SGSEDRT 1002

Query: 282  MDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + ++  D  + A ++ L +      S + SPD   +V  S+ +G+ +L+   +  +  ++
Sbjct: 1003 VKLW--DTATGALQQTLDSHSERVRSVALSPDGRLLVSGSE-DGRVKLW--DTASAALQQ 1057

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WS 398
              +          +SP G L+A +        + +        +  +E  +    +  +S
Sbjct: 1058 TLESHSRGILAVAFSPDGRLLASSSQDDT---VKLWDTATGALQKTLESQSEWFWSVIFS 1114

Query: 399  PSGRSLIFSRKK 410
            P GR L     +
Sbjct: 1115 PDGRLLALGSSQ 1126



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 102/306 (33%), Gaps = 49/306 (16%)

Query: 159  SDDIYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            +    Q       ++   + F+ +     SG    ++ + D     ++    S  + +  
Sbjct: 967  ASGALQKTFESPLEWVLAVAFLPDGRLLASGSEDRTVKLWDTATGALQQTLDSHSERVRS 1026

Query: 217  PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
               SP+ + +   + D     RV L DT      + + +    ILA  FS +G+    S 
Sbjct: 1027 VALSPDGRLLVSGSEDG----RVKLWDTASAALQQTLESHSRGILAVAFSPDGRLLA-SS 1081

Query: 277  QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +D+ + ++  D  + A ++ L +      S  +SPD   +   S    + ++ +  +  
Sbjct: 1082 SQDDTVKLW--DTATGALQKTLESQSEWFWSVIFSPDGRLLALGSS---QRKITLWDTAT 1136

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTK-----------------------------F 366
            +  ++I +          +SP G L+A                                 
Sbjct: 1137 NALQQILEGHSQRIEAMEFSPDGRLLASGSSDKTVKLWDTTSGALQKSLKGHSRLQGSGS 1196

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +  KF +          +  ++  +  + +  +S  GR L        D   K++     
Sbjct: 1197 NDTKFKLW--DTATGLLQQTLDSHSKMVWSVAFSLDGRLLA---SGSADRTVKIWDTSTG 1251

Query: 425  GRNETL 430
               +TL
Sbjct: 1252 ALKQTL 1257



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 73/214 (34%), Gaps = 20/214 (9%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            ++         +    FSP+ + +A  + D      V + DT      + + +    +  
Sbjct: 887  LQQTFEGHSHWVQSVAFSPDGRLLASGSADR----TVKIWDTSTGALQQTLESHSDWVQL 942

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFES 320
              FS +G+    S  +D  + ++  D  S A ++ T    +    + ++ PD   +   S
Sbjct: 943  VTFSLDGRLLA-SGSRDRTIKLW--DTASGALQK-TFESPLEWVLAVAFLPDGRLLASGS 998

Query: 321  -DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             DR     + +  +     ++              SP G L+      G    + +    
Sbjct: 999  EDRT----VKLWDTATGALQQTLDSHSERVRSVALSPDGRLLVSGSEDG---RVKLWDTA 1051

Query: 380  GSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKD 411
             +  +         + A  +SP GR L  S + D
Sbjct: 1052 SAALQQTLESHSRGILAVAFSPDGRLLASSSQDD 1085


>gi|218438157|ref|YP_002376486.1| hypothetical protein PCC7424_1167 [Cyanothece sp. PCC 7424]
 gi|218170885|gb|ACK69618.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 1163

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 103/306 (33%), Gaps = 44/306 (14%)

Query: 115  RVIKEGKDRLRVEF------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      ++          +LWD+   K+I   +    P             +      
Sbjct: 850  SVSFSPDGKILASGSSDKTAKLWDMTTGKEITTFEVHQHP-------------VLSVSFS 896

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              G          +++ SG   N++ + D +        P     +    FSP+ + +A 
Sbjct: 897  PDG----------KTLASGSRDNTVKLWDVETGKEITSLPGHQDWVISVSFSPDGKTLAS 946

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + D+     V L D    +    +   +  +++  FS +GK    S  +D  + ++ VD
Sbjct: 947  GSRDN----TVKLWDVETGKEITSLPGHQDWVISVSFSPDGKTLA-SGSRDNTVKLWDVD 1001

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                          + +S S+SPD   +   SD      + +   +   +    +  +  
Sbjct: 1002 -TGKEITTFEGHQHLVLSVSFSPDGKILASGSD---DNTVKLWDVDTGKEISTFEGHQDV 1057

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIF 406
                 +SP G ++A   F      + +      +E    E       + ++SP G++L  
Sbjct: 1058 VMSVSFSPDGKILASGSFDKT---VKLWDLTTGKEITTFEGHQDWVGSVSFSPDGKTLA- 1113

Query: 407  SRKKDG 412
            S  +DG
Sbjct: 1114 SGSRDG 1119



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 62/341 (18%), Positives = 115/341 (33%), Gaps = 42/341 (12%)

Query: 128  FRLWDVKDRKQIIGKK--------FFSSPASWRKIAHTISDD---------IYQSITGEK 170
             +LW V + K+++              SP    K+  T SDD         I + IT  +
Sbjct: 785  IKLWSVLEGKELMTLTGHQNMVSNVSFSPDD--KMVATGSDDKTVKLWDIAINKEITTLR 842

Query: 171  GDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            G   + +L VS S       SG    +  + D                +    FSP+ + 
Sbjct: 843  G-HQNSVLSVSFSPDGKILASGSSDKTAKLWDMTTGKEITTFEVHQHPVLSVSFSPDGKT 901

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +A  + D+     V L D    +    +   +  +++  FS +GK    S  +D  + ++
Sbjct: 902  LASGSRDN----TVKLWDVETGKEITSLPGHQDWVISVSFSPDGKTLA-SGSRDNTVKLW 956

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             V+        L       IS S+SPD   +   S R+   +L+    +   +    +  
Sbjct: 957  DVE-TGKEITSLPGHQDWVISVSFSPDGKTLASGS-RDNTVKLW--DVDTGKEITTFEGH 1012

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRS 403
            +       +SP G ++A          + +   D  +E    E       + ++SP G+ 
Sbjct: 1013 QHLVLSVSFSPDGKILASGSDDNT---VKLWDVDTGKEISTFEGHQDVVMSVSFSPDGKI 1069

Query: 404  LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            L        D   KL+ +       T      +     +  
Sbjct: 1070 LA---SGSFDKTVKLWDLTTGKEITTFEGHQDWVGSVSFSP 1107



 Score = 86.2 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 57/317 (17%), Positives = 122/317 (38%), Gaps = 42/317 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+++  G     +  +LWDV   ++I  K F     S   I  + S D  + I     D 
Sbjct: 606 GKILASGSADQTI--KLWDVTTWQEI--KTFTGHRDSINSI--SFSPDS-KMIASGSNDK 658

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             +I ++++      ++                     Q +    FSP+ + +A ++Y  
Sbjct: 659 TIKIWYLTKRQRPKNLRY-------------------HQPILSVSFSPDGKTIASSSYSK 699

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L D   D+  + +   +  +    FS +GK  + S   DE + ++ V  +   
Sbjct: 700 ----TIKLWDVAKDKPFQTLKGHKDWVTDVSFSPDGKFLV-SGSGDETIKLWDV-TKGKE 753

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-YFDP 352
            +     L   +S ++S D   IV  S    K+Q+  + S    ++ ++     +   + 
Sbjct: 754 VKTFIGHLHWVVSVNFSFDGKTIVSSS----KDQMIKLWSVLEGKELMTLTGHQNMVSNV 809

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP   ++A T    +   +  +  +     L    +++ + ++SP G+ L        
Sbjct: 810 SFSPDDKMVA-TGSDDKTVKLWDIAINKEITTLRGHQNSVLSVSFSPDGKILA---SGSS 865

Query: 413 DTGSKLYSIDLNGRNET 429
           D  +KL+ +   G+  T
Sbjct: 866 DKTAKLWDM-TTGKEIT 881



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 84/246 (34%), Gaps = 16/246 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D                +    FSP+ + +A  + D      + +    
Sbjct: 611 SGSADQTIKLWDVTTWQEIKTFTGHRDSINSISFSPDSKMIASGSNDK----TIKIWYLT 666

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             + PK +   + + L+  FS +GK    S    + + ++ V  +    + L        
Sbjct: 667 KRQRPKNLRYHQPI-LSVSFSPDGKTIA-SSSYSKTIKLWDV-AKDKPFQTLKGHKDWVT 723

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             S+SPD   +V  S   G E + +       + +             +S  G  I  + 
Sbjct: 724 DVSFSPDGKFLVSGS---GDETIKLWDVTKGKEVKTFIGHLHWVVSVNFSFDGKTIV-SS 779

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +   +  +  +G +   L    N+ +  ++SP  + +        D   KL+ I +N
Sbjct: 780 SKDQMIKLWSV-LEGKELMTLTGHQNMVSNVSFSPDDKMVATGSD---DKTVKLWDIAIN 835

Query: 425 GRNETL 430
               TL
Sbjct: 836 KEITTL 841



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/253 (18%), Positives = 88/253 (34%), Gaps = 47/253 (18%)

Query: 89   QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKF 144
            +      S+P  QDW       +++     +G            +LWDV+  K+I     
Sbjct: 917  ETGKEITSLPGHQDW-------VISVSFSPDGKTLASGSRDNTVKLWDVETGKEITSLP- 968

Query: 145  FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
                       H   D +        G          +++ SG   N++ + D D     
Sbjct: 969  ----------GHQ--DWVISVSFSPDG----------KTLASGSRDNTVKLWDVDTGKEI 1006

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    ++    FSP+ + +A  + D+     V L D    +        + ++++  
Sbjct: 1007 TTFEGHQHLVLSVSFSPDGKILASGSDDN----TVKLWDVDTGKEISTFEGHQDVVMSVS 1062

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESD 321
            FS +GK  L S   D+ + ++  DL +     +T          S S+SPD   +   S 
Sbjct: 1063 FSPDGK-ILASGSFDKTVKLW--DLTTGKE--ITTFEGHQDWVGSVSFSPDGKTLASGS- 1116

Query: 322  REGKEQLYVMQSN 334
            R+G   L+    +
Sbjct: 1117 RDGIIILWRRSFD 1129



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/296 (17%), Positives = 99/296 (33%), Gaps = 32/296 (10%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R I H   + +        G          +++ S    N++ + D   A          
Sbjct: 547 RFIGHK--NSVNSISFSPDG----------KTLASSSDDNTIKIWDIATAKELITLTGHQ 594

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           + +    FSP+ + +A  + D      + L D    +  K     R  I +  FS + K 
Sbjct: 595 KSVNCISFSPDGKILASGSADQ----TIKLWDVTTWQEIKTFTGHRDSINSISFSPDSKM 650

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S   D+ + I+ +  +    + L     I +S S+SPD   I   S     + + + 
Sbjct: 651 IA-SGSNDKTIKIWYLTKRQR-PKNLRYHQPI-LSVSFSPDGKTIASSSY---SKTIKLW 704

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                   +  +  +    D  +SP G  +           I +      +E        
Sbjct: 705 DVAKDKPFQTLKGHKDWVTDVSFSPDGKFLV---SGSGDETIKLWDVTKGKEVKTFIGHL 761

Query: 392 LQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
               +  +S  G++++ S K   D   KL+S+ L G+   TL       S+  +  
Sbjct: 762 HWVVSVNFSFDGKTIVSSSK---DQMIKLWSV-LEGKELMTLTGHQNMVSNVSFSP 813


>gi|60683198|ref|YP_213342.1| putative exported peptidase [Bacteroides fragilis NCTC 9343]
 gi|60494632|emb|CAH09433.1| putative exported peptidase [Bacteroides fragilis NCTC 9343]
          Length = 1095

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 115/302 (38%), Gaps = 40/302 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ E G FN   ++          +    V       +R+L+ + +  L    +  +
Sbjct: 231 FYYLSEENGTFN---VYQRTPGSDTSKQ----VTHHKQHPVRFLSMASNGNLC---YGFD 280

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +    A       + V ++  R D+   R             S +GK     ++ D   
Sbjct: 281 GEIYTLAPGGKPQKVSVKILSDRNDKDLIRQIKTSGATEM-AVSPDGKEVAFILRGD--- 336

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   ++   T+++TNT        ++PD   +V+ S+R G  QLY       D+K+ +
Sbjct: 337 -VYVTSVEYKTTKQVTNTPCQERGIDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKQFT 395

Query: 343 Q----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                      + + + F+P +SP G  IAF +      AI V+     + R +++    
Sbjct: 396 YATELKEERLTNSDIASFNPKYSPDGKEIAFLENRT---AIRVINLKTKKVRTVMDAQYQ 452

Query: 393 QAPT-------WSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP--Q 441
            + +       WSP  + ++  F     G     +  ++ +G+ E    T +  SD   +
Sbjct: 453 YSYSDGDQWFEWSPDSKWILSEFI-GIGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAK 511

Query: 442 WV 443
           WV
Sbjct: 512 WV 513



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 71/204 (34%), Gaps = 30/204 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    I++V +      ++T     + +  +SPDS QI F SDR 
Sbjct: 30  AISPDGTTIAFTYKGD----IFTVPVSGGKATQITTNPAFDTTPIWSPDSKQIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKF- 371
           G   ++++  +G + +R++           ++  G  I FT             S  +F 
Sbjct: 86  GSMDVFIVSKDGGEPRRLTT-FSGGETPVAFTDAG-HILFTADIMPSTEDAGFPSNGQFQ 143

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---------IFSRKKDGDTGSKLYSID 422
            I  +   G +  ++     ++  + +  G  L          + + +       ++ + 
Sbjct: 144 QIYQIPVSGGRP-VMFSSMPMECISINKEGTILYQDKKGYEDYWRKHQKSPIARDIWMLR 202

Query: 423 L--NGRNETLINTPAYASDPQWVG 444
                R E          +P W  
Sbjct: 203 PGQTPRYEKQTTFIGEDREPVWAP 226



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 78/223 (34%), Gaps = 35/223 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V +          +I    +    P +S + K+   +  
Sbjct: 30  AISPDGTTIAFTY--KGDIFTVPV----SGGKATQITTNPAFDTTPIWSPDSKQIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGK- 325
           +  +MD++ V        RLT         +++ D+  I+F +D             G+ 
Sbjct: 84  RMGSMDVFIVSKDGGEPRRLTTFSGGETPVAFT-DAGHILFTADIMPSTEDAGFPSNGQF 142

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIG 374
           +Q+Y +  +G      S            + +G ++   K   E +            I 
Sbjct: 143 QQIYQIPVSGGRPVMFSSMP---MECISINKEGTILYQDKKGYEDYWRKHQKSPIARDIW 199

Query: 375 VMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +++   +   E+        + P W+P G+S  +  +++G   
Sbjct: 200 MLRPGQTPRYEKQTTFIGEDREPVWAPDGKSFYYLSEENGTFN 242



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 89/241 (36%), Gaps = 30/241 (12%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPK--RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           Y     +  +   +   R  + P+  +   F      P ++ +GK      +++   ++Y
Sbjct: 185 YWRKHQKSPIARDIWMLRPGQTPRYEKQTTFIGEDREPVWAPDGKSFYYLSEENGTFNVY 244

Query: 286 SVDLQSNATERLTNTL---------FINISASYSPDSSQIVFESDREGKEQLYVMQ--SN 334
                S+ ++++T+             N +  Y  D    ++     GK Q   ++  S+
Sbjct: 245 QRTPGSDTSKQVTHHKQHPVRFLSMASNGNLCYGFDGE--IYTLAPGGKPQKVSVKILSD 302

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQ 393
            +D+  I Q K +   +   SP G  +AF         + V   +    + +       +
Sbjct: 303 RNDKDLIRQIKTSGATEMAVSPDGKEVAFILRGD----VYVTSVEYKTTKQVTNTPCQER 358

Query: 394 APTWSPSGRSLIFSRKKDG----------DTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              ++P GR+L+++ ++ G              K ++     + E L N+   + +P++ 
Sbjct: 359 GIDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKQFTYATELKEERLTNSDIASFNPKYS 418

Query: 444 G 444
            
Sbjct: 419 P 419



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 9/99 (9%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSR 408
                SP G  IAFT        I  +   G +  ++    +    P WSP  + + F+ 
Sbjct: 27  RHCAISPDGTTIAFTYKGD----IFTVPVSGGKATQITTNPAFDTTPIWSPDSKQIAFAS 82

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
            + G     ++ +  +G     + T +    P  V F D
Sbjct: 83  DRMGSM--DVFIVSKDGGEPRRLTTFSGGETP--VAFTD 117



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 59/170 (34%), Gaps = 23/170 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDT----------RIDRAPKRIGNFRSMILAPRFSSN 268
           F+P+ + + YA+ +   + ++Y                +   +R+ N       P++S +
Sbjct: 362 FAPDGRTLVYAS-ERGGLWQLYTSTIVRKDEKQFTYATELKEERLTNSDIASFNPKYSPD 420

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN------TLFINISASYSPDSSQIV--FES 320
           GK       +     I  ++L++     + +          +    +SPDS  I+  F  
Sbjct: 421 GKEIAFLENR---TAIRVINLKTKKVRTVMDAQYQYSYSDGDQWFEWSPDSKWILSEFIG 477

Query: 321 DREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                 + + ++ ++G  +     +   S  +  W   G  + +      
Sbjct: 478 IGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAKWVLGGKAMVWFSDRAG 527



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 88/278 (31%), Gaps = 38/278 (13%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    + ++   K  +  +   G     +T         P +SP+ +++A+A+     + 
Sbjct: 31  ISPDGTTIAFTYKGDIFTVPVSGGKATQITT-NPAFDTTPIWSPDSKQIAFASDRMGSMD 89

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV------------QKDEAMDIY 285
               + ++    P+R+  F        F ++    L +                +   IY
Sbjct: 90  --VFIVSKDGGEPRRLTTFSGGETPVAF-TDAGHILFTADIMPSTEDAGFPSNGQFQQIY 146

Query: 286 SVDLQSNATERLTNTL----FINISASYSPDSSQIV--FESDREGKE---QLYVMQSNGS 336
            + +        ++       IN   +      +    +    +       +++++   +
Sbjct: 147 QIPVSGGRPVMFSSMPMECISINKEGTILYQDKKGYEDYWRKHQKSPIARDIWMLRPGQT 206

Query: 337 D--QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              +K+ +   E    +PVW+P G    +       F +          + +    + Q 
Sbjct: 207 PRYEKQTTFIGE--DREPVWAPDGKSFYYLSEENGTFNVYQRTPGSDTSKQVTH--HKQH 262

Query: 395 PTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNGRNETL 430
           P      R L  +   +       ++Y++   G+ + +
Sbjct: 263 PV-----RFLSMASNGNLCYGFDGEIYTLAPGGKPQKV 295



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 46/123 (37%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F P++SP+ +++A+        ++ +     R     +   ++        +
Sbjct: 405 LTNSDIASFNPKYSPDGKEIAFLENRTAIRVINLKTKKVRTVMDAQYQYSYSDGDQWFEW 464

Query: 266 SSNGKRA---LISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K      I +      DI  ++         LT + + + +A +      +V+ SD
Sbjct: 465 SPDSKWILSEFIGIGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAKWVLGGKAMVWFSD 524

Query: 322 REG 324
           R G
Sbjct: 525 RAG 527



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           ++    SP G ++ F+ K        ++++ ++G   T I T PA+ + P W  
Sbjct: 26  MRHCAISPDGTTIAFTYK------GDIFTVPVSGGKATQITTNPAFDTTPIWSP 73


>gi|53715261|ref|YP_101253.1| putative Tricorn-like protease [Bacteroides fragilis YCH46]
 gi|52218126|dbj|BAD50719.1| putative Tricorn-like protease [Bacteroides fragilis YCH46]
          Length = 1095

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 115/302 (38%), Gaps = 40/302 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ E G FN   ++          +    V       +R+L+ + +  L    +  +
Sbjct: 231 FYYLSEENGTFN---VYQRTPGSDTSKQ----VTHHKQHPVRFLSMASNGNLC---YGFD 280

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +    A       + V ++  R D+   R             S +GK     ++ D   
Sbjct: 281 GEIYTLAPGGKPQKVSVKILSDRNDKDLIRQIKTSGATEM-AVSPDGKEVAFILRGD--- 336

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   ++   T+++TNT        ++PD   +V+ S+R G  QLY       D+K+ +
Sbjct: 337 -VYVTSVEYKTTKQVTNTPCQERGIDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKQFT 395

Query: 343 Q----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                      + + + F+P +SP G  IAF +      AI V+     + R +++    
Sbjct: 396 YATELKEERLTNSDIASFNPKYSPDGKEIAFLENRT---AIRVINLKTKKVRTVMDAQYQ 452

Query: 393 QAPT-------WSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP--Q 441
            + +       WSP  + ++  F     G     +  ++ +G+ E    T +  SD   +
Sbjct: 453 YSYSDGDQWFEWSPDSKWILSEFI-GIGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAK 511

Query: 442 WV 443
           WV
Sbjct: 512 WV 513



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 71/204 (34%), Gaps = 30/204 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    I++V +      ++T     + +  +SPDS QI F SDR 
Sbjct: 30  AISPDGTTIAFTYKGD----IFTVPVSGGKATQITTNPAFDTTPIWSPDSKQIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKF- 371
           G   ++++  +G + +R++           ++  G  I FT             S  +F 
Sbjct: 86  GSMDVFIVSKDGGEPRRLTT-FSGGETPVAFTDAG-HILFTADIMPSTEDAGFPSNGQFQ 143

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---------IFSRKKDGDTGSKLYSID 422
            I  +   G +  ++     ++  + +  G  L          + + +       ++ + 
Sbjct: 144 QIYQIPVSGGRP-VMFSSMPMECISINKEGTILYQDKKGYEDYWRKHQKSPIARDIWMLR 202

Query: 423 L--NGRNETLINTPAYASDPQWVG 444
                R E          +P W  
Sbjct: 203 PGQTPRYEKQTTFIGEDREPVWAP 226



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 78/223 (34%), Gaps = 35/223 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V +          +I    +    P +S + K+   +  
Sbjct: 30  AISPDGTTIAFTY--KGDIFTVPV----SGGKATQITTNPAFDTTPIWSPDSKQIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----------REGK- 325
           +  +MD++ V        RLT         +++ D+  I+F +D             G+ 
Sbjct: 84  RMGSMDVFIVSKDGGEPRRLTTFSGGETPVAFT-DAGHILFTADIMPSTEDAGFPSNGQF 142

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIG 374
           +Q+Y +  +G      S            + +G ++   K   E +            I 
Sbjct: 143 QQIYQIPVSGGRPVMFSSMP---MECISINKEGTILYQDKKGYEDYWRKHQKSPIARDIW 199

Query: 375 VMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +++   +   E+        + P W+P G+S  +  +++G   
Sbjct: 200 MLRPGQTPRYEKQTTFIGEDREPVWAPDGKSFYYLSEENGTFN 242



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 89/241 (36%), Gaps = 30/241 (12%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPK--RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           Y     +  +   +   R  + P+  +   F      P ++ +GK      +++   ++Y
Sbjct: 185 YWRKHQKSPIARDIWMLRPGQTPRYEKQTTFIGEDREPVWAPDGKSFYYLSEENGTFNVY 244

Query: 286 SVDLQSNATERLTNTL---------FINISASYSPDSSQIVFESDREGKEQLYVMQ--SN 334
                S+ ++++T+             N +  Y  D    ++     GK Q   ++  S+
Sbjct: 245 QRTPGSDTSKQVTHHKQHPVRFLSMASNGNLCYGFDGE--IYTLAPGGKPQKVSVKILSD 302

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQ 393
            +D+  I Q K +   +   SP G  +AF         + V   +    + +       +
Sbjct: 303 RNDKDLIRQIKTSGATEMAVSPDGKEVAFILRGD----VYVTSVEYKTTKQVTNTPCQER 358

Query: 394 APTWSPSGRSLIFSRKKDG----------DTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              ++P GR+L+++ ++ G              K ++     + E L N+   + +P++ 
Sbjct: 359 GIDFAPDGRTLVYASERGGLWQLYTSTIVRKDEKQFTYATELKEERLTNSDIASFNPKYS 418

Query: 444 G 444
            
Sbjct: 419 P 419



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 9/99 (9%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSR 408
                SP G  IAFT        I  +   G +  ++    +    P WSP  + + F+ 
Sbjct: 27  RHCAISPDGTTIAFTYKGD----IFTVPVSGGKATQITTNPAFDTTPIWSPDSKQIAFAS 82

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
            + G     ++ +  +G     + T +    P  V F D
Sbjct: 83  DRMGSM--DVFIVSKDGGEPRRLTTFSGGETP--VAFTD 117



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 59/170 (34%), Gaps = 23/170 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDT----------RIDRAPKRIGNFRSMILAPRFSSN 268
           F+P+ + + YA+ +   + ++Y                +   +R+ N       P++S +
Sbjct: 362 FAPDGRTLVYAS-ERGGLWQLYTSTIVRKDEKQFTYATELKEERLTNSDIASFNPKYSPD 420

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN------TLFINISASYSPDSSQIV--FES 320
           GK       +     I  ++L++     + +          +    +SPDS  I+  F  
Sbjct: 421 GKEIAFLENR---TAIRVINLKTKKVRTVMDAQYQYSYSDGDQWFEWSPDSKWILSEFIG 477

Query: 321 DREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                 + + ++ ++G  +     +   S  +  W   G  + +      
Sbjct: 478 IGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAKWVLGGKAMVWFSDRAG 527



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 88/278 (31%), Gaps = 38/278 (13%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    + ++   K  +  +   G     +T         P +SP+ +++A+A+     + 
Sbjct: 31  ISPDGTTIAFTYKGDIFTVPVSGGKATQITT-NPAFDTTPIWSPDSKQIAFASDRMGSMD 89

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV------------QKDEAMDIY 285
               + ++    P+R+  F        F ++    L +                +   IY
Sbjct: 90  --VFIVSKDGGEPRRLTTFSGGETPVAF-TDAGHILFTADIMPSTEDAGFPSNGQFQQIY 146

Query: 286 SVDLQSNATERLTNTL----FINISASYSPDSSQIV--FESDREGKE---QLYVMQSNGS 336
            + +        ++       IN   +      +    +    +       +++++   +
Sbjct: 147 QIPVSGGRPVMFSSMPMECISINKEGTILYQDKKGYEDYWRKHQKSPIARDIWMLRPGQT 206

Query: 337 D--QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              +K+ +   E    +PVW+P G    +       F +          + +    + Q 
Sbjct: 207 PRYEKQTTFIGE--DREPVWAPDGKSFYYLSEENGTFNVYQRTPGSDTSKQVTH--HKQH 262

Query: 395 PTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNGRNETL 430
           P      R L  +   +       ++Y++   G+ + +
Sbjct: 263 PV-----RFLSMASNGNLCYGFDGEIYTLAPGGKPQKV 295



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 46/123 (37%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F P++SP+ +++A+        ++ +     R     +   ++        +
Sbjct: 405 LTNSDIASFNPKYSPDGKEIAFLENRTAIRVINLKTKKVRTVMDAQYQYSYSDGDQWFEW 464

Query: 266 SSNGKRA---LISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K      I +      DI  ++         LT + + + +A +      +V+ SD
Sbjct: 465 SPDSKWILSEFIGIGGWNNKDIVLLNADGKGEMHNLTESGYSDGNAKWVLGGKAMVWFSD 524

Query: 322 REG 324
           R G
Sbjct: 525 RAG 527



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 7/54 (12%)

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           ++    SP G ++ F+ K        ++++ ++G   T I T PA+ + P W  
Sbjct: 26  MRHCAISPDGTTIAFTYK------GDIFTVPVSGGKATQITTNPAFDTTPIWSP 73


>gi|116624506|ref|YP_826662.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227668|gb|ABJ86377.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 687

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 57/345 (16%), Positives = 118/345 (34%), Gaps = 71/345 (20%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H   D +  +     G + +  +   ++  +      + +   DG     +T S +    
Sbjct: 30  HRFHD-VRDAQLSPDGKWVAYTVNTVDT-AADKSDTDVWIASWDGKQQMRMTSSPESESS 87

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             ++SP+ + +++ +          +    R     ++  + +  + A  +S + K+ L+
Sbjct: 88  P-KWSPDGKYLSFLSSRPGKAKGNQVWLLDRNGGEAQQFTDVKGRVSAYDWSPDSKKLLL 146

Query: 275 SVQKDEAMD---------------------------------------------IYSVDL 289
            +   +  D                                             +Y  D+
Sbjct: 147 VIADRDPNDPADDERPAGAAPAAGAAGKAPKPIVIDRYKFKQDVVGYLTAPPSRLYLYDV 206

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGK-------EQLYVMQS-NGSDQKRI 341
            +   E LT+      SA +SPD   I F   R GK         ++VM++  G+  +++
Sbjct: 207 ATKKAEALTDPSLEAASAVWSPDGKWISFI-GRSGKDWERYNTNNVFVMEARAGAVPRQL 265

Query: 342 SQ----DKEASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLLVE--D 389
           +Q        S     WSP G  + + + +G K        I ++   G   ++L +  D
Sbjct: 266 TQYDGVRGSVSRGRAEWSPDGTKLVYLQSTGAKQSAYNMTRIAMVPVAGGTPQVLADKLD 325

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             + AP ++P G S+IF    D         +   G  + LI  P
Sbjct: 326 RGVSAPRFTPDGASVIFLAADDRSEYPATVPL-GGGDVKRLIKGP 369



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 97/296 (32%), Gaps = 72/296 (24%)

Query: 220 SPNQQKVAYATYD----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ + VAY         +       + +   +   R+ +      +P++S +GK     
Sbjct: 41  SPDGKWVAYTVNTVDTAADKSDTDVWIASWDGKQQMRMTSSPESESSPKWSPDGKYLSFL 100

Query: 276 VQKDE---AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKE----- 326
             +        ++ +D      ++ T+      +  +SPDS +++   +DR+  +     
Sbjct: 101 SSRPGKAKGNQVWLLDRNGGEAQQFTDVKGRVSAYDWSPDSKKLLLVIADRDPNDPADDE 160

Query: 327 ---------------------------------------QLYVMQSNGSDQKRISQDKEA 347
                                                  +LY+        + ++ D   
Sbjct: 161 RPAGAAPAAGAAGKAPKPIVIDRYKFKQDVVGYLTAPPSRLYLYDVATKKAEALT-DPSL 219

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKK-DGSQERLLVE-DSNLQAPT--- 396
                VWSP G  I+F   SG+ +       + VM+   G+  R L + D    + +   
Sbjct: 220 EAASAVWSPDGKWISFIGRSGKDWERYNTNNVFVMEARAGAVPRQLTQYDGVRGSVSRGR 279

Query: 397 --WSPSGRSLIFSRKKDGDTGS----KLYSIDLNGRNETLINT--PAYASDPQWVG 444
             WSP G  L++ +       +    ++  + + G    ++        S P++  
Sbjct: 280 AEWSPDGTKLVYLQSTGAKQSAYNMTRIAMVPVAGGTPQVLADKLDRGVSAPRFTP 335



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 9/109 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTW 397
           +     D   SP G  +A+T              + +   DG Q  R+     +  +P W
Sbjct: 31  RFHDVRDAQLSPDGKWVAYTVNTVDTAADKSDTDVWIASWDGKQQMRMTSSPESESSPKW 90

Query: 398 SPSGRSLIFSRKKDGDT-GSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
           SP G+ L F   + G   G++++ +D NG   +   +     S   W  
Sbjct: 91  SPDGKYLSFLSSRPGKAKGNQVWLLDRNGGEAQQFTDVKGRVSAYDWSP 139



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 64/202 (31%), Gaps = 34/202 (16%)

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           V G +             L+DV  +K                 A  ++D   ++ +    
Sbjct: 190 VVGYLTAPPS-----RLYLYDVATKK-----------------AEALTDPSLEAASAVWS 227

Query: 172 DFNSRILFVSESVVSGIIKNS--LCVMD-RDGANIRYLTPSRDQILFEPR----FSPNQQ 224
                I F+  S       N+  + VM+ R GA  R LT          R    +SP+  
Sbjct: 228 PDGKWISFIGRSGKDWERYNTNNVFVMEARAGAVPRQLTQYDGVRGSVSRGRAEWSPDGT 287

Query: 225 KVAY-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           K+ Y     A     ++ R+ ++                 + APRF+ +G   +     D
Sbjct: 288 KLVYLQSTGAKQSAYNMTRIAMVPVAGGTPQVLADKLDRGVSAPRFTPDGASVIFLAADD 347

Query: 280 EAMDIYSVDLQSNATERLTNTL 301
            +    +V L     +RL    
Sbjct: 348 RSEYPATVPLGGGDVKRLIKGP 369


>gi|149277633|ref|ZP_01883774.1| putative Tricorn-like protease [Pedobacter sp. BAL39]
 gi|149231866|gb|EDM37244.1| putative Tricorn-like protease [Pedobacter sp. BAL39]
          Length = 1073

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 88/238 (36%), Gaps = 22/238 (9%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P  +P+ Q V ++   + D+ +V         A  R+       + PR S +GK    S
Sbjct: 30  YPALTPDAQTVVFSF--EGDLWKV----PATGGAATRLTAMPGEEINPRVSPDGKWLAFS 83

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +    D+Y + +     ++LT     +   ++S DS  I F S R      Y + +NG
Sbjct: 84  SNQFGNYDVYVMPMAGGTVKQLTFNDTADEVDNWSWDSKTIYFSSGRYNMYTTYTVGANG 143

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------------AIGVMKKDGSQE 383
              KR+  +   +  +   +P G+L     +  + F             I          
Sbjct: 144 GTAKRLFPNFFNTIHNVAEAPSGELFFNDTWESKNFANRKRYKGAFNPDIQSYNPKTKAY 203

Query: 384 RLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           +   +        T + SG+ + ++   +G+    LY+ + + +   L + P+    P
Sbjct: 204 KQYTDYKGKDLWATVAKSGK-VYYASD-EGNDEYNLYTFEGD-KKLRLTDFPSAIKRP 258



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 7/171 (4%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +           +     +  N       P  + + +  + S + D    ++ V     
Sbjct: 1   MKRTFFAITTALLLSGTVTQAQNETYFTAYPALTPDAQTVVFSFEGD----LWKVPATGG 56

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           A  RLT      I+   SPD   + F S++ G   +YVM   G   K+++ +  A   D 
Sbjct: 57  AATRLTAMPGEEINPRVSPDGKWLAFSSNQFGNYDVYVMPMAGGTVKQLTFNDTADEVDN 116

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSG 401
            WS     I F+      +    +  +G   + L  +    +     +PSG
Sbjct: 117 -WSWDSKTIYFSSGRYNMYTTYTVGANGGTAKRLFPNFFNTIHNVAEAPSG 166



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 95/226 (42%), Gaps = 28/226 (12%)

Query: 220 SPNQQKVAYATYDD-------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           SP+ +K+A+ +  +          +R            +        ++  ++ S+ +  
Sbjct: 316 SPDGKKLAFVSRGELFVSDAEGKFIRKINRGLENGINER--------VMEVKWLSDNRTL 367

Query: 273 LISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           + +       + +S+       T++LT+    N + +++ D +Q V+ S   G++++ VM
Sbjct: 368 VFNQTFKGYPNWFSIAADGKGKTKQLTSENRSNRAIAFNKDRTQAVYLS---GRDEVRVM 424

Query: 332 QSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                + K I +D+  ++   +P +SP G  + FT +   +  I V     ++   L   
Sbjct: 425 DLKSLESKTIVKDEIWAFQNANPSFSPDGAYVLFTAYRNFEQDIFVHHLKQNKTINLTNT 484

Query: 390 SNLQ-APTWSPSGRSLIFSRKKD------GDTGSKLYSIDLNGRNE 428
              + +P+WSP G+ + F+  +       G     +Y + L+  +E
Sbjct: 485 GVTETSPSWSPDGKYIFFTSLRTKPSYPFGMQNGHVYRMALDDYDE 530



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 108/308 (35%), Gaps = 41/308 (13%)

Query: 163 YQSITGEKG-------DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           Y+  T  KG         + ++ + S+    G  + +L   + D    +         + 
Sbjct: 203 YKQYTDYKGKDLWATVAKSGKVYYASDE---GNDEYNLYTFEGD---KKLRLTDFPSAIK 256

Query: 216 EPRFSPNQQKVAY--------ATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFS 266
            P  + N   + +             +   ++ +  +R     K +  + R  I     S
Sbjct: 257 RPFVAANGASIVFERDYQLYLYNVSSKTSRKINIEVSRNTVLSKDQEFDVRGSITDFDAS 316

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFIN---ISASYSPDSSQIVFESD 321
            +GK+     +     +++  D +     ++       IN   +   +  D+  +VF   
Sbjct: 317 PDGKKLAFVSRG----ELFVSDAEGKFIRKINRGLENGINERVMEVKWLSDNRTLVFNQT 372

Query: 322 REGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +G    + + ++G    K+++ +  ++     ++       +      +  + VM    
Sbjct: 373 FKGYPNWFSIAADGKGKTKQLTSENRSN-RAIAFNKDRTQAVYLS---GRDEVRVMDLKS 428

Query: 381 SQERLLVED----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            + + +V+D         P++SP G  ++F+  ++ +    ++ +  N +   L NT   
Sbjct: 429 LESKTIVKDEIWAFQNANPSFSPDGAYVLFTAYRNFEQDIFVHHLKQN-KTINLTNTGVT 487

Query: 437 ASDPQWVG 444
            + P W  
Sbjct: 488 ETSPSWSP 495



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 75/196 (38%), Gaps = 13/196 (6%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           RKI   + + I + +   K   ++R L  +++        S+     DG        S +
Sbjct: 341 RKINRGLENGINERVMEVKWLSDNRTLVFNQTFKGYPNWFSIA---ADGKGKTKQLTSEN 397

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +      F+ ++ +  Y +    D +RV  + +   +   +   +      P FS +G  
Sbjct: 398 RSNRAIAFNKDRTQAVYLS--GRDEVRVMDLKSLESKTIVKDEIWAFQNANPSFSPDGAY 455

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG------- 324
            L +  ++   DI+   L+ N T  LTNT     S S+SPD   I F S R         
Sbjct: 456 VLFTAYRNFEQDIFVHHLKQNKTINLTNTGVTETSPSWSPDGKYIFFTSLRTKPSYPFGM 515

Query: 325 -KEQLYVMQSNGSDQK 339
               +Y M  +  D+ 
Sbjct: 516 QNGHVYRMALDDYDEP 531



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 81/225 (36%), Gaps = 14/225 (6%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT----PSRDQILFEPRFSPN 222
              +G             ++ + +  L V D +G  IR +        ++ + E ++  +
Sbjct: 304 FDVRGSITDFDASPDGKKLAFVSRGELFVSDAEGKFIRKINRGLENGINERVMEVKWLSD 363

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + + +     +     + +        K++ +      A  F+ +  +A+    +DE  
Sbjct: 364 NRTLVF-NQTFKGYPNWFSIAADGKGKTKQLTSENRSNRAIAFNKDRTQAVYLSGRDEVR 422

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +    L+S    +     F N + S+SPD + ++F + R  ++ ++V     +    ++
Sbjct: 423 VMDLKSLESKTIVKDEIWAFQNANPSFSPDGAYVLFTAYRNFEQDIFVHHLKQNKTINLT 482

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGE--------KFAIGVMKKD 379
                +   P WSP G  I FT    +           +  M  D
Sbjct: 483 NTG-VTETSPSWSPDGKYIFFTSLRTKPSYPFGMQNGHVYRMALD 526



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 96/300 (32%), Gaps = 43/300 (14%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           +   ++S+ ++ S    +     +   +  +G   + L P+    +     +P+ +    
Sbjct: 115 DNWSWDSKTIYFSSGRYN---MYTTYTVGANGGTAKRLFPNFFNTIHNVAEAPSGELFFN 171

Query: 229 ATYDDEDILRVYLMDTRIDRAP----------KRIGNFRSMILAPRFSSNGKRALISVQK 278
            T++ ++           +             K+  +++   L    + +GK  +     
Sbjct: 172 DTWESKNFANRKRYKGAFNPDIQSYNPKTKAYKQYTDYKGKDLWATVAKSGK--VYYASD 229

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   +      + +   RLT+          + + + IVFE D     QLY+   +    
Sbjct: 230 EGNDEYNLYTFEGDKKLRLTDFPSAIKRPFVAANGASIVFERD----YQLYLYNVSSKTS 285

Query: 339 KRIS--------------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           ++I+               D   S  D   SP G  +AF         + V   +G   R
Sbjct: 286 RKINIEVSRNTVLSKDQEFDVRGSITDFDASPDGKKLAFVSRG----ELFVSDAEGKFIR 341

Query: 385 LLVED------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            +           +    W    R+L+F++   G       + D  G+ + L +      
Sbjct: 342 KINRGLENGINERVMEVKWLSDNRTLVFNQTFKGYPNWFSIAADGKGKTKQLTSENRSNR 401


>gi|282878207|ref|ZP_06287003.1| WD40-like protein [Prevotella buccalis ATCC 35310]
 gi|281299625|gb|EFA91998.1| WD40-like protein [Prevotella buccalis ATCC 35310]
          Length = 1068

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 66/324 (20%), Positives = 123/324 (37%), Gaps = 47/324 (14%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            F     + R      S   +  ++ E G FN     V +  V    K  +         
Sbjct: 209 TFNGEDRTPRWAPDGAS---FYYLSEEDGTFN-----VYKRGVKSADKTQI--THHTKHP 258

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMIL 261
           +RYL+ +++  +    +S + +            + V +   R D    ++I  + +  +
Sbjct: 259 VRYLSVAQNGRIC---YSYDGEIYTQMGSAAPQKVNVSITADRNDIDLSRQIKTWGATEI 315

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           A   S NGK     +  D    +Y  +++   T+++T+T     S  +SPD   IV+ S+
Sbjct: 316 A--LSPNGKEIGFVLHGD----VYVTNIEYKTTKQITDTPEQERSIEFSPDGLAIVYASE 369

Query: 322 REGKEQLYVMQSNGSDQKRISQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKF 371
           REG  Q+Y        +K+ +   +           + F P +SP G  IAF +  G   
Sbjct: 370 REGLWQIYQTTMKNKAEKQFAYATDLQEERLIHSAYTSFQPQYSPDGKSIAFFENRGT-- 427

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGDTGSK---LYSI 421
            + V+     + R +++   + + +       WSP  + LI      G  G     +  I
Sbjct: 428 -LKVLDVKSKKVRTVMDGKYVYSYSDGDIWFEWSPDSKWLI--SNYIGTGGWNNQDIALI 484

Query: 422 DLNGRNET--LINTPAYASDPQWV 443
           D  G+     L  +   A + +WV
Sbjct: 485 DAEGKKPIYNLTQSGYNAGNGKWV 508



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 70/201 (34%), Gaps = 28/201 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G+    S + D    +++V        +LT+    +    +SPD  +I F S RE
Sbjct: 29  SISPDGQTIAFSYKGD----VFTVPASGGQARQLTSNAAYDSYPIWSPDGKKIAFASSRE 84

Query: 324 GKEQLYVMQSNGSDQKRIS-----------QDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           G   ++VM   G + KR++           +D E   F     P    I F   S  +  
Sbjct: 85  GSLDIFVMDKFGGEPKRLTTRSTNETPIAWRDNEHILFSAAIMPTAKSIFFASSSFPQ-- 142

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---------IFSRKKDGDTGSKLYSIDL 423
           +  +   G + + L     ++  + +  G  L          F +         ++ ++ 
Sbjct: 143 VYEVNLKGDRPK-LFSVVTMEDLSINQKGEILYHDKKGYEDAFRKHHHSPITRDIW-LNQ 200

Query: 424 NGRNETLINTPAYASDPQWVG 444
           NG    L         P+W  
Sbjct: 201 NGNFSKLTTFNGEDRTPRWAP 221



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 89/247 (36%), Gaps = 39/247 (15%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +     SP+ Q +A++     D+  V           +++ +  +    P +S +G
Sbjct: 21  NPLWMRHTSISPDGQTIAFSY--KGDVFTV----PASGGQARQLTSNAAYDSYPIWSPDG 74

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI------------SASYSPDSSQIV 317
           K+   +  ++ ++DI+ +D      +RLT                   SA+  P +  I 
Sbjct: 75  KKIAFASSREGSLDIFVMDKFGGEPKRLTTRSTNETPIAWRDNEHILFSAAIMPTAKSIF 134

Query: 318 FESDREGKEQLYVMQSNGSDQKR----------ISQDKEASYFDPVWSPQGDLIAF--TK 365
           F S      Q+Y +   G   K           I+Q  E  Y D          AF    
Sbjct: 135 FAS--SSFPQVYEVNLKGDRPKLFSVVTMEDLSINQKGEILYHDKKGYED----AFRKHH 188

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            S     I +  ++G+  +L   +   + P W+P G S  +  ++DG     +Y   +  
Sbjct: 189 HSPITRDIWL-NQNGNFSKLTTFNGEDRTPRWAPDGASFYYLSEEDGTF--NVYKRGVKS 245

Query: 426 RNETLIN 432
            ++T I 
Sbjct: 246 ADKTQIT 252



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 47/384 (12%), Positives = 108/384 (28%), Gaps = 136/384 (35%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  +  +   G   R LT S       P +SP+ +K+A+A+  +   L +++MD +  
Sbjct: 40  SYKGDVFTVPASGGQARQLT-SNAAYDSYPIWSPDGKKIAFASSREGS-LDIFVMD-KFG 96

Query: 248 RAPKRIGNFRSMI------------LAPRFSSNGKRALISVQKDEAMDIYSVDLQS---- 291
             PKR+    +               +       K    +        +Y V+L+     
Sbjct: 97  GEPKRLTTRSTNETPIAWRDNEHILFSAAIMPTAKSIFFASSS--FPQVYEVNLKGDRPK 154

Query: 292 -----------------------------------------------NATERLTNTLFIN 304
                                                              +LT     +
Sbjct: 155 LFSVVTMEDLSINQKGEILYHDKKGYEDAFRKHHHSPITRDIWLNQNGNFSKLTTFNGED 214

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE------------------ 346
            +  ++PD +   + S+ +G   +Y      +D+ +I+   +                  
Sbjct: 215 RTPRWAPDGASFYYLSEEDGTFNVYKRGVKSADKTQITHHTKHPVRYLSVAQNGRICYSY 274

Query: 347 -----------------------------------ASYFDPVWSPQGDLIAFTKFSGEKF 371
                                                  +   SP G  I F        
Sbjct: 275 DGEIYTQMGSAAPQKVNVSITADRNDIDLSRQIKTWGATEIALSPNGKEIGFVLHGD--- 331

Query: 372 AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDG----------DTGSKLYS 420
            + V   +    + + +    + +  +SP G +++++ +++G          +   K ++
Sbjct: 332 -VYVTNIEYKTTKQITDTPEQERSIEFSPDGLAIVYASEREGLWQIYQTTMKNKAEKQFA 390

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
              + + E LI++   +  PQ+  
Sbjct: 391 YATDLQEERLIHSAYTSFQPQYSP 414



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 5/121 (4%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                 F+P++SP+ + +A+        +L V     R     K + ++    +   +S 
Sbjct: 402 HSAYTSFQPQYSPDGKSIAFFENRGTLKVLDVKSKKVRTVMDGKYVYSYSDGDIWFEWSP 461

Query: 268 NGKRALISVQKDE---AMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDRE 323
           + K  + +          DI  +D +       LT + +   +  +      I+F+SDR 
Sbjct: 462 DSKWLISNYIGTGGWNNQDIALIDAEGKKPIYNLTQSGYNAGNGKWVLGGKAIIFQSDRA 521

Query: 324 G 324
           G
Sbjct: 522 G 522



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 7/59 (11%)

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVG 444
                ++  + SP G+++ FS K        ++++  +G     + +  AY S P W  
Sbjct: 20  TNPLWMRHTSISPDGQTIAFSYK------GDVFTVPASGGQARQLTSNAAYDSYPIWSP 72


>gi|125559315|gb|EAZ04851.1| hypothetical protein OsI_27029 [Oryza sativa Indica Group]
          Length = 659

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/283 (19%), Positives = 93/283 (32%), Gaps = 58/283 (20%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P FSP+   +A    D      V +   R D A + +      +    +S      + +
Sbjct: 346 FPSFSPDAAHLA-MNGDFFKTPGVTI--LRSDGAKRWVLTREPNLFYTSWSPAESGVIFT 402

Query: 276 VQKD------EAMDIYSVDLQSNATE-----------RLTN-TLFINISASYSPDSSQIV 317
                       + I  ++  +                LT      +   + SP    +V
Sbjct: 403 SMGPIFETTKATVRIARLEFDAGELTTGRDEVAATLKVLTRPEAGNDAFPAVSPCGKWVV 462

Query: 318 FESDREGKEQLYVMQSNGSD--------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           F S R G + LY++ +   +         +R++ D E     P WSP G LIAF+    +
Sbjct: 463 FRSGRSGHKNLYIVDAAHGEDVGAGEGTIRRLT-DGEWIDTMPSWSPDGSLIAFSSNRHD 521

Query: 370 K-----FAIGVMKKDGSQERLL----------VEDSNLQAPTWSPSGRSLIFSRKKDG-- 412
                 F+I +++ DGS  R +           +   +    +SP  R L+F+    G  
Sbjct: 522 PTNAAVFSIYLVRPDGSGLRRVHVAGPAGSAAADRERINHVCFSPDSRWLLFTANFGGVM 581

Query: 413 ----------DTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
                          LY   L+G     +   AY    P W  
Sbjct: 582 AEPISAPNQFQPYGDLYVCRLDGSGLVRLTCNAYENGTPAWGP 624



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 96/292 (32%), Gaps = 36/292 (12%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD----DEDI 236
           +           L  ++ +  +      + +   + P FSP+  +V Y  +       D 
Sbjct: 263 TRRKGRAQRHVELFDLETESFSPLTERLNPELHHYNPFFSPSGDRVGYHRFRGAGARGDS 322

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           +  YL   R   +  R+         P FS +     ++    +   +  +         
Sbjct: 323 VVPYLQPVRSPVSSLRMLRVYG--TFPSFSPDAAHLAMNGDFFKTPGVTILRSDGAKRWV 380

Query: 297 LTNTLFINISASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQ-----------K 339
           LT    +  + S+SP  S ++F S        +   ++  ++ +  +            K
Sbjct: 381 LTREPNLFYT-SWSPAESGVIFTSMGPIFETTKATVRIARLEFDAGELTTGRDEVAATLK 439

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK---------DGSQERLLVEDS 390
            +++ +  +   P  SP G  + F         + ++           +G+  RL   + 
Sbjct: 440 VLTRPEAGNDAFPAVSPCGKWVVFRSGRSGHKNLYIVDAAHGEDVGAGEGTIRRLTDGEW 499

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASD 439
               P+WSP G  + FS  +   T +    +Y +  +G     ++    A  
Sbjct: 500 IDTMPSWSPDGSLIAFSSNRHDPTNAAVFSIYLVRPDGSGLRRVHVAGPAGS 551



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 54/173 (31%), Gaps = 35/173 (20%)

Query: 178 LFVSESVVSGIIKNSLCVMDRD-------GANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             V  S  SG    +L ++D         G          + I   P +SP+   +A+++
Sbjct: 460 WVVFRSGRSG--HKNLYIVDAAHGEDVGAGEGTIRRLTDGEWIDTMPSWSPDGSLIAFSS 517

Query: 231 YDDED----ILRVYLMDTRIDRAPKR-IGNFRSMILAPR-------FSSNGKRALISVQK 278
              +     +  +YL+        +  +        A R       FS + +  L +   
Sbjct: 518 NRHDPTNAAVFSIYLVRPDGSGLRRVHVAGPAGSAAADRERINHVCFSPDSRWLLFTANF 577

Query: 279 DE--------------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                             D+Y   L  +   RLT   + N + ++ P SS   
Sbjct: 578 GGVMAEPISAPNQFQPYGDLYVCRLDGSGLVRLTCNAYENGTPAWGPASSPAA 630



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 9/128 (7%)

Query: 293 ATERLTNTLFINISASYSPDSSQ-IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           A  R T+ + +N +A +  D  + + F S+R G   L+  +     +       E S F 
Sbjct: 35  AERRHTDGVSVNFNAQFVDDGGEEVAFVSERGGAAGLFRCRPGPEQRAEPLPTVEGSLFH 94

Query: 352 PVWSPQGDLIAFTK---FSGEKFAIG--VMKKD-GSQERLLVEDSN--LQAPTWSPSGRS 403
              + +G  + F          F     V   + GS+E + V        +P  S SG  
Sbjct: 95  DRPTVRGGRLYFVSAHEQPPAPFRSWAAVYATEIGSKETVRVSPPGVVDMSPAVSDSGEL 154

Query: 404 LIFSRKKD 411
           +  +   D
Sbjct: 155 VAVASYGD 162


>gi|88703636|ref|ZP_01101352.1| peptidase S9B family protein [Congregibacter litoralis KT71]
 gi|88702350|gb|EAQ99453.1| peptidase S9B family protein [Congregibacter litoralis KT71]
          Length = 689

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 53/292 (18%), Positives = 91/292 (31%), Gaps = 60/292 (20%)

Query: 212 QILFEPRFSPNQQKVAYATYD---DEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSS 267
           +    P+ SP+ Q+V Y        ED  R  L    I    + ++ +F     +  +S 
Sbjct: 50  EWALNPQISPDSQQVVYRRMGFDIMEDRRRGNLWLVDIASQRQHKLSSFEGNESSAVWSP 109

Query: 268 NGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD---- 321
            G R         DE  +IY   L+   + R+T          +SPD   + F  D    
Sbjct: 110 RGDRIAYVRSAGDDEGAEIYMHWLEGGQSARVTRLPATPKDIRWSPDGRHLAFVMDVKAE 169

Query: 322 -----------------------------REGK-------EQLYVMQSNGSDQKRISQDK 345
                                        R+G          ++V+ + G   ++I++  
Sbjct: 170 APSLASRPEKPEGAQWSDMPRVTDRMYHERDGSGYLDAAFSHVFVVPAEGGTARQITRGD 229

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFA--------IGVMKKDGSQERLLVEDSNLQAPTW 397
              +  P WS  G+ +  +    E +           V  +DG    +   D     P  
Sbjct: 230 FH-HRQPSWSADGESLLVSGNRSEDWQYDYRNSEIYRVALRDGDTAAVTSTDGPDHHPLV 288

Query: 398 SPSGRSLIFSRKKDGD-----TGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           SP G+ L +    D       T  ++   D +G  E L +         W  
Sbjct: 289 SPDGKHLAWLGYADKKQAFQVTRLRIARHDGSGMRELLGDLDRSVKAITWSA 340



 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 101/306 (33%), Gaps = 58/306 (18%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              + +L ++D      ++   S +       +SP   ++AY     +D      M    
Sbjct: 76  DRRRGNLWLVDIASQR-QHKLSSFEGNESSAVWSPRGDRIAYVRSAGDDEGAEIYMHWLE 134

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISV------------------------------ 276
                R+    +     R+S +G+     +                              
Sbjct: 135 GGQSARVTRLPATPKDIRWSPDGRHLAFVMDVKAEAPSLASRPEKPEGAQWSDMPRVTDR 194

Query: 277 ---QKDEAMDI-------YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--- 323
              ++D +  +       + V  +     ++T   F +   S+S D   ++   +R    
Sbjct: 195 MYHERDGSGYLDAAFSHVFVVPAEGGTARQITRGDFHHRQPSWSADGESLLVSGNRSEDW 254

Query: 324 ----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIG 374
                  ++Y +     D   ++   +     P+ SP G  +A+  ++ +K       + 
Sbjct: 255 QYDYRNSEIYRVALRDGDTAAVTS-TDGPDHHPLVSPDGKHLAWLGYADKKQAFQVTRLR 313

Query: 375 VMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + + DGS  R L+   D +++A TWS     L F     G T  K+  + L    +TL +
Sbjct: 314 IARHDGSGMRELLGDLDRSVKAITWSADSDGLYFQYDDKGRT--KVAYVSLKDSMKTLAD 371

Query: 433 TPAYAS 438
                S
Sbjct: 372 NLGGTS 377


>gi|115473615|ref|NP_001060406.1| Os07g0638100 [Oryza sativa Japonica Group]
 gi|27261082|dbj|BAC45195.1| unknown protein [Oryza sativa Japonica Group]
 gi|113611942|dbj|BAF22320.1| Os07g0638100 [Oryza sativa Japonica Group]
          Length = 659

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 60/336 (17%), Positives = 101/336 (30%), Gaps = 62/336 (18%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y       GD      F         +   L  +     +              P FSP+
Sbjct: 297 YNPFFSPSGDRVGYHRFRGAGARGDSVVPYLQPV----QSPVSSLRMLRVYGTFPSFSPD 352

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--- 279
              +A    D      V +   R D A + +      +    +S      + +       
Sbjct: 353 AAHLA-MNGDFFKTPGVTI--LRSDGAKRWVLTREPNLFYTSWSPAESGVIFTSMGPIFE 409

Query: 280 ---EAMDIYSVDLQSNATE-----------RLTN-TLFINISASYSPDSSQIVFESDREG 324
                + I  ++  +                LT      +   + SP    +VF S R G
Sbjct: 410 TTKATVRIARLEFDAGELTTGRDEVAATLKVLTRPEAGNDAFPAVSPCGKWVVFRSGRSG 469

Query: 325 KEQLYVMQSNGSD--------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-----F 371
            + LY++ +   +         +R++ D E     P WSP G LIAF+    +      F
Sbjct: 470 HKNLYIVDAAHGEDVGAGEGTIRRLT-DGEWIDTMPSWSPDGSLIAFSSNRHDPTNAAVF 528

Query: 372 AIGVMKKDGSQERLL----------VEDSNLQAPTWSPSGRSLIFSRKKDG--------- 412
           +I +++ DGS  R +           +   +    +SP  R L+F+    G         
Sbjct: 529 SIYLVRPDGSGLRRVHVAGPAGSAAADRERINHVCFSPDSRWLLFTANFGGVMAEPISAP 588

Query: 413 ---DTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
                   LY   L+G     +   AY    P W  
Sbjct: 589 NQFQPYGDLYVCRLDGSGLVRLTCNAYENGTPAWGP 624



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 97/296 (32%), Gaps = 36/296 (12%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD---- 232
           I   +           L  ++ +  +      + +   + P FSP+  +V Y  +     
Sbjct: 259 IAVATRRKGRAQRHVELFDLETESFSPLTERLNPELHHYNPFFSPSGDRVGYHRFRGAGA 318

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             D +  YL   +   +  R+         P FS +     ++    +   +  +     
Sbjct: 319 RGDSVVPYLQPVQSPVSSLRMLRVYG--TFPSFSPDAAHLAMNGDFFKTPGVTILRSDGA 376

Query: 293 ATERLTNTLFINISASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQ-------- 338
               LT    +  + S+SP  S ++F S        +   ++  ++ +  +         
Sbjct: 377 KRWVLTREPNLFYT-SWSPAESGVIFTSMGPIFETTKATVRIARLEFDAGELTTGRDEVA 435

Query: 339 ---KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK---------DGSQERLL 386
              K +++ +  +   P  SP G  + F         + ++           +G+  RL 
Sbjct: 436 ATLKVLTRPEAGNDAFPAVSPCGKWVVFRSGRSGHKNLYIVDAAHGEDVGAGEGTIRRLT 495

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASD 439
             +     P+WSP G  + FS  +   T +    +Y +  +G     ++    A  
Sbjct: 496 DGEWIDTMPSWSPDGSLIAFSSNRHDPTNAAVFSIYLVRPDGSGLRRVHVAGPAGS 551



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 54/173 (31%), Gaps = 35/173 (20%)

Query: 178 LFVSESVVSGIIKNSLCVMDRD-------GANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             V  S  SG    +L ++D         G          + I   P +SP+   +A+++
Sbjct: 460 WVVFRSGRSG--HKNLYIVDAAHGEDVGAGEGTIRRLTDGEWIDTMPSWSPDGSLIAFSS 517

Query: 231 YDDED----ILRVYLMDTRIDRAPKR-IGNFRSMILAPR-------FSSNGKRALISVQK 278
              +     +  +YL+        +  +        A R       FS + +  L +   
Sbjct: 518 NRHDPTNAAVFSIYLVRPDGSGLRRVHVAGPAGSAAADRERINHVCFSPDSRWLLFTANF 577

Query: 279 DE--------------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                             D+Y   L  +   RLT   + N + ++ P SS   
Sbjct: 578 GGVMAEPISAPNQFQPYGDLYVCRLDGSGLVRLTCNAYENGTPAWGPASSPAA 630



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 9/128 (7%)

Query: 293 ATERLTNTLFINISASYSPDSSQ-IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           A  R T+ + +N +A +  D  + + F S+R G   L+  +     +       E S F 
Sbjct: 35  AERRHTDGVSVNFNAQFVDDGGEEVAFVSERGGAAGLFRCRPGPEQRAEPLPTVEGSLFH 94

Query: 352 PVWSPQGDLIAFTK---FSGEKFAIG--VMKKD-GSQERLLVEDSN--LQAPTWSPSGRS 403
              + +G  + F          F     V   + GS+E + V        +P  S SG  
Sbjct: 95  DRPTVRGGRLYFVSAHEQPPAPFRSWAAVYATEIGSKETVRVSPPGVVDMSPAVSDSGEL 154

Query: 404 LIFSRKKD 411
           +  +   D
Sbjct: 155 VAVASYGD 162


>gi|330831249|ref|YP_004394201.1| putative Tricorn protease [Aeromonas veronii B565]
 gi|328806385|gb|AEB51584.1| Putative Tricorn protease [Aeromonas veronii B565]
          Length = 1055

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 87/243 (35%), Gaps = 27/243 (11%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            L EP  SP+ +++A+             + +        +     +   P +S +GKR 
Sbjct: 29  WLHEPALSPDGKQLAFTWQGR------IFVASAEGGPATALTGSDYLSQRPIWSPDGKRL 82

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +       D++ V        RLT     ++  ++S D  +++  S R G        
Sbjct: 83  AFAANLYGNEDVFVVPASGGEMVRLTRDSRTDLPQAFSADGKRLLLSSQRLGAPDADHFV 142

Query: 333 SNGSD-----QKRISQDKEASYFDPVWS---PQGDLIAFTK------FSGEKFAIGVMKK 378
           + G          I+     +      +   P G+ + +        F   + +  V + 
Sbjct: 143 AEGYQWGELYWTPITGGTLQADLPLPATLARPHGERLVYQMPAADQPFRKHQHSFAVPRL 202

Query: 379 ---DGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT 433
              DG Q + L ED      P WS  G +L +  ++ GD    ++  DL +G+ + L + 
Sbjct: 203 WLFDGKQHKQLTEDRVAATDPVWSDKGDALFYLSERSGDF--NVWRRDLASGKEQQLTHY 260

Query: 434 PAY 436
             +
Sbjct: 261 QGH 263



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/275 (12%), Positives = 76/275 (27%), Gaps = 73/275 (26%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  + V   +G          D +   P +SP+ +++A+A     +      +     
Sbjct: 45  TWQGRIFVASAEGG-PATALTGSDYLSQRPIWSPDGKRLAFAANLYGN--EDVFVVPASG 101

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRAL-------------ISVQKDEAMDIYSVDLQSNAT 294
               R+       L   FS++GKR L                +  +  ++Y   +     
Sbjct: 102 GEMVRLTRDSRTDLPQAFSADGKRLLLSSQRLGAPDADHFVAEGYQWGELYWTPITGGTL 161

Query: 295 -------------------------------------------------ERLTNTLFINI 305
                                                            ++LT       
Sbjct: 162 QADLPLPATLARPHGERLVYQMPAADQPFRKHQHSFAVPRLWLFDGKQHKQLTEDRVAAT 221

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              +S     + + S+R G   ++        +++++  +         S  GDL+    
Sbjct: 222 DPVWSDKGDALFYLSERSGDFNVWRRDLASGKEQQLTHYQGHPVRGLSASRNGDLVW--S 279

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           + GE + +     D S+ R L     + +   +P 
Sbjct: 280 WLGELYRL---DADSSEPRKLTLTPQVAS---APD 308



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/346 (13%), Positives = 96/346 (27%), Gaps = 72/346 (20%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              L+D K  KQ+   +  ++   W         D    ++   GDFN            
Sbjct: 201 RLWLFDGKQHKQLTEDRVAATDPVWSDKG-----DALFYLSERSGDFN-------VWRRD 248

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF---------SPNQQKVAYATYDDEDIL 237
                   +    G  +R L+ SR+  L              S   +K+           
Sbjct: 249 LASGKEQQLTHYQGHPVRGLSASRNGDLVWSWLGELYRLDADSSEPRKLTLTPQVASAPD 308

Query: 238 RVYLMDTRID--------------------------RAPKRIGNFRSMILAPRFSSNGKR 271
                 T  D                             +++    S   +P F+  G+ 
Sbjct: 309 EASEALTLADEALVSEEADELILVSEGNLFAVDPERDRVRQLTRDPSEQSSPLFAEQGRA 368

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-------------ASYSPDSSQIVF 318
            +   ++     +Y   L+    + L +                       SPD  Q+ F
Sbjct: 369 LIYLSEQQGHAALYR--LRKGDPDLLFSDPGTLTESLLLAIPDKGISRPVLSPDGKQLAF 426

Query: 319 ESDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIG 374
             D    + ++++    + Q+ +   S +         ++P    +A T +    +  I 
Sbjct: 427 VVD---GQAIHLLDLASNKQRELVPASLNPSRHEVHLAFAPDSRHLALTFRPDAAEQEIA 483

Query: 375 VMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           V+     + + +   +       P WS  G  L +   + G  G  
Sbjct: 484 VIDTANPKAKPVNVSLNGYQDGQPGWSQDGAILYWQSTRFGALGPD 529


>gi|327311633|ref|YP_004338530.1| acylamino-acid-releasing enzyme [Thermoproteus uzoniensis 768-20]
 gi|326948112|gb|AEA13218.1| acylamino-acid-releasing enzyme, putative [Thermoproteus uzoniensis
           768-20]
          Length = 636

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 55/315 (17%), Positives = 107/315 (33%), Gaps = 55/315 (17%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                ++   ++      +S+  +D      R + P    I   P+   +  ++A+ +  
Sbjct: 20  GRGYFVYTKINIKKDRYDSSIWEVDLSSLEKRAILPGPADIAPLPK---DG-RIAFLSRR 75

Query: 233 D--EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE---------- 280
              +    + L        P+R+  F   +L   +S +G R  +   +            
Sbjct: 76  GLGKKSRGIGLWILERGGVPRRLAYFPLGVLDLSWSPDGSRLAVVAYRGRPEKDVKHVEG 135

Query: 281 --------------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                            +Y VD  S   +  T        A++SPD   I +   R+   
Sbjct: 136 LPLWMNDFGFSYNVESHLYLVDAASGVKKAATEGWARVRHAAWSPDGRYIAYTVARDQLR 195

Query: 327 ----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKF----AIGVMK 377
                L V        K +++  E S     WSP+ D +A         F     I V  
Sbjct: 196 PYLVDLVVYDVAAKTHKVLARGLE-SAHHVAWSPKSDAVAVAGHKMPRGFASHNRIYVYW 254

Query: 378 KDGSQERLL---------VEDSNLQAPTWSP----SGRSLIFSRKKDGDTGSKLYSIDLN 424
            DGS+  L            +S+++ P+++P    +G  + F     G   ++LY +D++
Sbjct: 255 LDGSERCLTCNFDRNVVNTLNSDVRGPSYAPVVQWAGDFVYFVATVGGS--AELYRVDMD 312

Query: 425 GRNETLINTPAYASD 439
           G+ E +I       +
Sbjct: 313 GKVERVIGGEGVVDE 327



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 56/314 (17%), Positives = 104/314 (33%), Gaps = 58/314 (18%)

Query: 174 NSRILFVSESVVSGIIK-NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + RI F+S   +    +   L +++R G   R        +     +SP+  ++A   Y 
Sbjct: 66  DGRIAFLSRRGLGKKSRGIGLWILERGGVPRRLAYFPLGVLDL--SWSPDGSRLAVVAYR 123

Query: 233 DEDILRV-----------------------YLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
                 V                       YL+D       K      + +    +S +G
Sbjct: 124 GRPEKDVKHVEGLPLWMNDFGFSYNVESHLYLVDAASGVK-KAATEGWARVRHAAWSPDG 182

Query: 270 KRALISVQKDEAM----DIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-------- 317
           +    +V +D+      D+   D+ +   + L   L      ++SP S  +         
Sbjct: 183 RYIAYTVARDQLRPYLVDLVVYDVAAKTHKVLARGLESAHHVAWSPKSDAVAVAGHKMPR 242

Query: 318 -FESDREGKEQLYVMQSNGSDQ-------KRISQDKEASYFDPVWSP----QGDLIAFTK 365
            F S      ++YV   +GS++       + +     +    P ++P     GD + F  
Sbjct: 243 GFAS----HNRIYVYWLDGSERCLTCNFDRNVVNTLNSDVRGPSYAPVVQWAGDFVYFVA 298

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             G    +  +  DG  ER++  +  +       SGR L      D      LY     G
Sbjct: 299 TVGGSAELYRVDMDGKVERVIGGEGVVDEFAVDGSGRILYTFMTADSPKELYLYE---GG 355

Query: 426 RNETLINTPAYASD 439
           R E L +   +A +
Sbjct: 356 RIERLTSFNDFAKE 369


>gi|20259480|gb|AAM13860.1| unknown protein [Arabidopsis thaliana]
          Length = 657

 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 83/255 (32%), Gaps = 51/255 (20%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPK 251
           + V   DG+  +  T  +D+  F   +SP ++ V Y +        R+ +   RI   P 
Sbjct: 371 IKVSKSDGS--KRWTLIKDRTAFYNSWSPTERHVIYTSLGPIFSPARIAVQIARIKFDPS 428

Query: 252 RIGNFR---------------SMILAPRFSSNGKRALISVQKDEAMDIYSVDL-----QS 291
            +   +                    P  S +GK  +    +    ++Y VD        
Sbjct: 429 DLTADKEDLPCDVKILTLENTGNNAFPSCSPDGKSIVFRSGRSGHKNLYIVDAVNGESNG 488

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQL-----YVMQSNGSDQKRISQDKE 346
               RLT+  +I+    +SP    I F S+R   E       YV++ +G+  +RI     
Sbjct: 489 GGIRRLTDGPWIDTMPCWSPKGDLIGFSSNRHNPENTAVFGAYVVRPDGTGLRRIQISGP 548

Query: 347 AS--------YFDPVWSPQGDLIAFTKFSGEK--------------FAIGVMKKDGSQER 384
                          ++  GD + F                       + V+K DG+  R
Sbjct: 549 EGSEEAARERVNHVSFNKDGDWLVFAANLSGVTAEPVTMPNQFQPYGDLYVVKLDGTGLR 608

Query: 385 LLV-EDSNLQAPTWS 398
            L         PTW 
Sbjct: 609 RLTWNGYEDGTPTWH 623



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 88/292 (30%), Gaps = 37/292 (12%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE- 234
           RI   +           +  ++         + +     + P  SP+ + + Y  +  E 
Sbjct: 261 RIALATRRRGVNHRHIEIYDLENTTFQPVTESLNPSFHHYNPFVSPDSEFLGYHRFRGES 320

Query: 235 -DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                +      I    K +   R     P  S NG    ++   D    I       + 
Sbjct: 321 TQGESIVPNIESIVSPIKTLRLLRINGSFPSSSPNGDLIALNSDFDINGGIKVSKSDGS- 379

Query: 294 TERLT----NTLFINISASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKR--- 340
            +R T     T F N   S+SP    +++ S            Q+  ++ + SD      
Sbjct: 380 -KRWTLIKDRTAFYN---SWSPTERHVIYTSLGPIFSPARIAVQIARIKFDPSDLTADKE 435

Query: 341 --------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-----DGSQERLLV 387
                   ++ +   +   P  SP G  I F         + ++       +G   R L 
Sbjct: 436 DLPCDVKILTLENTGNNAFPSCSPDGKSIVFRSGRSGHKNLYIVDAVNGESNGGGIRRLT 495

Query: 388 EDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKL---YSIDLNGRNETLINTPA 435
           +   +   P WSP G  + FS  +     + +   Y +  +G     I    
Sbjct: 496 DGPWIDTMPCWSPKGDLIGFSSNRHNPENTAVFGAYVVRPDGTGLRRIQISG 547



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 92/263 (34%), Gaps = 36/263 (13%)

Query: 214 LFEPRFSPNQQKVAYATYDDE---DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            F P    + +++A AT         + +Y ++    +      N       P  S + +
Sbjct: 250 CFTPAAFRDGKRIALATRRRGVNHRHIEIYDLENTTFQPVTESLNPSFHHYNPFVSPDSE 309

Query: 271 RALISVQKDEAMDIYSV--DLQS--NATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                  + E+    S+  +++S  +  + L          S SP+   I   SD +   
Sbjct: 310 FLGYHRFRGESTQGESIVPNIESIVSPIKTLRLLRINGSFPSSSPNGDLIALNSDFDING 369

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDG 380
            + V +S+GS  KR +  K+ + F   WSP    + +T              I  +K D 
Sbjct: 370 GIKVSKSDGS--KRWTLIKDRTAFYNSWSPTERHVIYTSLGPIFSPARIAVQIARIKFDP 427

Query: 381 SQ-----------ERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---- 423
           S             ++L      N   P+ SP G+S++F   + G     LY +D     
Sbjct: 428 SDLTADKEDLPCDVKILTLENTGNNAFPSCSPDGKSIVFRSGRSGHK--NLYIVDAVNGE 485

Query: 424 --NGRNETLINTPAYASDPQWVG 444
              G    L + P   + P W  
Sbjct: 486 SNGGGIRRLTDGPWIDTMPCWSP 508



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 17/209 (8%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRID--------RAPKRIGNFRSMILAPRFSS 267
            P +S +   V +    D+    ++ +D   +          P R+         P    
Sbjct: 199 WPTWSGD-STVFFHHQADDGWWSIFRVDIPENFTEYTDFPITPIRVTPSGLHCFTPAAFR 257

Query: 268 NGKRALISVQKDE--AMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDR 322
           +GKR  ++ ++       I   DL++   + +T   N  F + +   SPDS  + +   R
Sbjct: 258 DGKRIALATRRRGVNHRHIEIYDLENTTFQPVTESLNPSFHHYNPFVSPDSEFLGYHRFR 317

Query: 323 EGKEQL-YVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               Q   ++ +  S    I   +    +   P  SP GDLIA          I V K D
Sbjct: 318 GESTQGESIVPNIESIVSPIKTLRLLRINGSFPSSSPNGDLIALNSDFDINGGIKVSKSD 377

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           GS+   L++D      +WSP+ R +I++ 
Sbjct: 378 GSKRWTLIKDRTAFYNSWSPTERHVIYTS 406



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 83/196 (42%), Gaps = 18/196 (9%)

Query: 267 SNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPD-SSQIVFESDREG 324
             G     +V +     D++S+++ ++   RLT+ + +N +A +  D S  +VF S+R G
Sbjct: 9   PKGTIIFTTVGRTHYGFDVFSLNIATSVERRLTDGVSVNFNAQFVNDKSDDVVFVSERNG 68

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKF-----AIGVMK 377
             ++Y  +S  S  ++I    E+ + D     Q + + F       +++     A+  ++
Sbjct: 69  SARIYKTRSGISKPEQIPGAPESYFHDRPIITQNNRLYFISAHEQPDRYFKNWSALYTVE 128

Query: 378 KDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN------GRNE 428
            + ++    R+   D+   +P  S SG  L  +       G + + I+ +       + E
Sbjct: 129 LNSAKREVTRVTPPDTTDFSPAVSQSGDFLAVASYGTRSWGGEFHEINTDITVFKASKPE 188

Query: 429 TLINTPAYASDPQWVG 444
           T +        P W G
Sbjct: 189 TRVVICERGGWPTWSG 204


>gi|15234357|ref|NP_192096.1| tolB protein-related [Arabidopsis thaliana]
 gi|4558556|gb|AAD22649.1|AC007138_13 predicted protein of unknown function [Arabidopsis thaliana]
 gi|7268571|emb|CAB80680.1| predicted protein of unknown function [Arabidopsis thaliana]
 gi|29824389|gb|AAP04154.1| unknown protein [Arabidopsis thaliana]
 gi|110742479|dbj|BAE99158.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656688|gb|AEE82088.1| tolB-related protein [Arabidopsis thaliana]
          Length = 652

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 83/255 (32%), Gaps = 51/255 (20%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPK 251
           + V   DG+  +  T  +D+  F   +SP ++ V Y +        R+ +   RI   P 
Sbjct: 366 IKVSKSDGS--KRWTLIKDRTAFYNSWSPTERHVIYTSLGPIFSPARIAVQIARIKFDPS 423

Query: 252 RIGNFR---------------SMILAPRFSSNGKRALISVQKDEAMDIYSVDL-----QS 291
            +   +                    P  S +GK  +    +    ++Y VD        
Sbjct: 424 DLTADKEDLPCDVKILTLENTGNNAFPSCSPDGKSIVFRSGRSGHKNLYIVDAVNGESNG 483

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQL-----YVMQSNGSDQKRISQDKE 346
               RLT+  +I+    +SP    I F S+R   E       YV++ +G+  +RI     
Sbjct: 484 GGIRRLTDGPWIDTMPCWSPKGDLIGFSSNRHNPENTAVFGAYVVRPDGTGLRRIQISGP 543

Query: 347 AS--------YFDPVWSPQGDLIAFTKFSGEK--------------FAIGVMKKDGSQER 384
                          ++  GD + F                       + V+K DG+  R
Sbjct: 544 EGSEEAARERVNHVSFNKDGDWLVFAANLSGVTAEPVTMPNQFQPYGDLYVVKLDGTGLR 603

Query: 385 LLV-EDSNLQAPTWS 398
            L         PTW 
Sbjct: 604 RLTWNGYEDGTPTWH 618



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 88/292 (30%), Gaps = 37/292 (12%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE- 234
           RI   +           +  ++         + +     + P  SP+ + + Y  +  E 
Sbjct: 256 RIALATRRRGVNHRHIEIYDLENTTFQPVTESLNPSFHHYNPFVSPDSEFLGYHRFRGES 315

Query: 235 -DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                +      I    K +   R     P  S NG    ++   D    I       + 
Sbjct: 316 TQGESIVPNIESIVSPIKTLRLLRINGSFPSSSPNGDLIALNSDFDINGGIKVSKSDGS- 374

Query: 294 TERLT----NTLFINISASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKR--- 340
            +R T     T F N   S+SP    +++ S            Q+  ++ + SD      
Sbjct: 375 -KRWTLIKDRTAFYN---SWSPTERHVIYTSLGPIFSPARIAVQIARIKFDPSDLTADKE 430

Query: 341 --------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-----DGSQERLLV 387
                   ++ +   +   P  SP G  I F         + ++       +G   R L 
Sbjct: 431 DLPCDVKILTLENTGNNAFPSCSPDGKSIVFRSGRSGHKNLYIVDAVNGESNGGGIRRLT 490

Query: 388 EDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKL---YSIDLNGRNETLINTPA 435
           +   +   P WSP G  + FS  +     + +   Y +  +G     I    
Sbjct: 491 DGPWIDTMPCWSPKGDLIGFSSNRHNPENTAVFGAYVVRPDGTGLRRIQISG 542



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 92/263 (34%), Gaps = 36/263 (13%)

Query: 214 LFEPRFSPNQQKVAYATYDDE---DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            F P    + +++A AT         + +Y ++    +      N       P  S + +
Sbjct: 245 CFTPAAFRDGKRIALATRRRGVNHRHIEIYDLENTTFQPVTESLNPSFHHYNPFVSPDSE 304

Query: 271 RALISVQKDEAMDIYSV--DLQS--NATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                  + E+    S+  +++S  +  + L          S SP+   I   SD +   
Sbjct: 305 FLGYHRFRGESTQGESIVPNIESIVSPIKTLRLLRINGSFPSSSPNGDLIALNSDFDING 364

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDG 380
            + V +S+GS  KR +  K+ + F   WSP    + +T              I  +K D 
Sbjct: 365 GIKVSKSDGS--KRWTLIKDRTAFYNSWSPTERHVIYTSLGPIFSPARIAVQIARIKFDP 422

Query: 381 SQ-----------ERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---- 423
           S             ++L      N   P+ SP G+S++F   + G     LY +D     
Sbjct: 423 SDLTADKEDLPCDVKILTLENTGNNAFPSCSPDGKSIVFRSGRSGHK--NLYIVDAVNGE 480

Query: 424 --NGRNETLINTPAYASDPQWVG 444
              G    L + P   + P W  
Sbjct: 481 SNGGGIRRLTDGPWIDTMPCWSP 503



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/209 (22%), Positives = 81/209 (38%), Gaps = 17/209 (8%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRID--------RAPKRIGNFRSMILAPRFSS 267
            P +S +   V +    D+    ++ +D   +          P R+         P    
Sbjct: 194 WPTWSGD-STVFFHHQADDGWWSIFRVDIPENFTEYTDFPITPIRVTPSGLHCFTPAAFR 252

Query: 268 NGKRALISVQKDE--AMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDR 322
           +GKR  ++ ++       I   DL++   + +T   N  F + +   SPDS  + +   R
Sbjct: 253 DGKRIALATRRRGVNHRHIEIYDLENTTFQPVTESLNPSFHHYNPFVSPDSEFLGYHRFR 312

Query: 323 EGKEQL-YVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               Q   ++ +  S    I   +    +   P  SP GDLIA          I V K D
Sbjct: 313 GESTQGESIVPNIESIVSPIKTLRLLRINGSFPSSSPNGDLIALNSDFDINGGIKVSKSD 372

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           GS+   L++D      +WSP+ R +I++ 
Sbjct: 373 GSKRWTLIKDRTAFYNSWSPTERHVIYTS 401



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 83/196 (42%), Gaps = 18/196 (9%)

Query: 267 SNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPD-SSQIVFESDREG 324
             G     +V +     D++S+++ ++   RLT+ + +N +A +  D S  +VF S+R G
Sbjct: 4   PKGTIIFTTVGRTHYGFDVFSLNIATSVERRLTDGVSVNFNAQFVNDKSDDVVFVSERNG 63

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKF-----AIGVMK 377
             ++Y  +S  S  ++I    E+ + D     Q + + F       +++     A+  ++
Sbjct: 64  SARIYKTRSGISKPEQIPGAPESYFHDRPIITQNNRLYFISAHEQPDRYFKNWSALYTVE 123

Query: 378 KDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN------GRNE 428
            + ++    R+   D+   +P  S SG  L  +       G + + I+ +       + E
Sbjct: 124 LNSAKREVTRVTPPDTADFSPAVSQSGDFLAVASYGTRSWGGEFHEINTDITVFKASKPE 183

Query: 429 TLINTPAYASDPQWVG 444
           T +        P W G
Sbjct: 184 TRVVICERGGWPTWSG 199


>gi|294633938|ref|ZP_06712495.1| tat pathway signal sequence domain-containing protein [Streptomyces
           sp. e14]
 gi|292830190|gb|EFF88542.1| tat pathway signal sequence domain-containing protein [Streptomyces
           sp. e14]
          Length = 646

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 56/318 (17%), Positives = 97/318 (30%), Gaps = 81/318 (25%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G   +SL + + DG N R L+            S +   V + +    D           
Sbjct: 61  GPSASSLYISNVDGTNERRLSQ-NAAYDHHATVSADGAWVYFTSERTGDGNSCLYRAAVD 119

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFIN 304
               + +    +M      S +G +      +  D    I+ +DL++ A   LT T  + 
Sbjct: 120 GSNVQPLVVDSAMNDWAVPSPDGTKVAFVSTRSADRRTQIWLLDLRTKALTDLTGTAALA 179

Query: 305 IS---------ASYSPDSSQIVFESDREGKEQ---------------LYVMQSNGSDQKR 340
                       S+SPD   I F SDR    +               +YV++ +G+  ++
Sbjct: 180 GDPAGPDGHFRPSWSPDGQWIAFSSDRNTVWRGHGNGTGWEHTQELSIYVIRPDGTGFRQ 239

Query: 341 ISQDKEASYFDPVWSPQGDLIAF-----------------------------------TK 365
           ++         P WSP G  I F                                     
Sbjct: 240 VASRDGYCQGSPKWSPDGSRIVFYELTVEDTWGAHRPEDIGIAESQIVSVDVASGARTVH 299

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQ-----------------APTWSPSGRSLIFSR 408
            SG    +       ++   LV+    +                 +P W+P GRS+I+ +
Sbjct: 300 TSGPNLKVAPQYVSSTEIGYLVKGGPDEGLAYVSGTLPSVKRSLRSPVWTPDGRSVIYEK 359

Query: 409 --KKDGDTGSKLYSIDLN 424
                    + LYS D +
Sbjct: 360 PDYTTRALDAPLYSWDAD 377



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 96/266 (36%), Gaps = 43/266 (16%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK- 278
           SP ++ V            +Y+ +       +R+    +       S++G     + ++ 
Sbjct: 48  SPGKKGVMLMNRIGPSASSLYISNVD-GTNERRLSQNAAYDHHATVSADGAWVYFTSERT 106

Query: 279 -DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNG 335
            D    +Y   +  +  + L     +N  A  SPD +++ F S R  + + Q++++    
Sbjct: 107 GDGNSCLYRAAVDGSNVQPLVVDSAMNDWAVPSPDGTKVAFVSTRSADRRTQIWLLDLRT 166

Query: 336 SDQKRIS--------QDKEASYFDPVWSPQGDLIAFTKFSGEKFA--------------- 372
                ++              +F P WSP G  IAF+      +                
Sbjct: 167 KALTDLTGTAALAGDPAGPDGHFRPSWSPDGQWIAFSSDRNTVWRGHGNGTGWEHTQELS 226

Query: 373 IGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSR------------KKDGDTGSKL 418
           I V++ DG+  R +   +     +P WSP G  ++F              +  G   S++
Sbjct: 227 IYVIRPDGTGFRQVASRDGYCQGSPKWSPDGSRIVFYELTVEDTWGAHRPEDIGIAESQI 286

Query: 419 YSIDL-NGRNETLINTPAYASDPQWV 443
            S+D+ +G      + P     PQ+V
Sbjct: 287 VSVDVASGARTVHTSGPNLKVAPQYV 312



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 61/354 (17%), Positives = 112/354 (31%), Gaps = 59/354 (16%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
            DV        +   +S  + +     +S      +   KG  +  + +VS ++ S    
Sbjct: 289 VDVASG----ARTVHTSGPNLKVAPQYVSSTEIGYL--VKGGPDEGLAYVSGTLPSVKRS 342

Query: 191 NSLCVMDRDG-----ANIRYLTPSRDQILF-------------EPRFSPNQQKVAYATYD 232
               V   DG         Y T + D  L+              P  S +  ++A     
Sbjct: 343 LRSPVWTPDGRSVIYEKPDYTTRALDAPLYSWDADWDYRFCDVFPALSKDG-RLAITNKQ 401

Query: 233 DEDILRVYLMDTRIDR-----------APKRIGNFRSMILAPRFSSNGKRALI------S 275
             +   V +     D+            P  +    +    P +S + K           
Sbjct: 402 LGNSSIVTMKADGTDQKVVFDTAASGLDPALVAKGLAGAFRPTWSHDAKWIAFGVGGWFQ 461

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +      +  V    ++ E LT+        SYS D ++IV+      +  L V+    
Sbjct: 462 TRATNTAVLVRVPSDGSSYEVLTDGSTNAGFPSYSEDGNKIVYRV-WGQENGLRVLDLKT 520

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDS-NLQ 393
                 +     S   P WS  G LI FT+ +    F +  +K DG+  ++L     N  
Sbjct: 521 RTT---TVLTTESDNLPDWSWDGKLILFTRRTSATNFDVCTIKPDGTGLKVLTSSGANDA 577

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLY-----------SIDLNGRNETLINTPAY 436
              W+  GR L  S        + LY           S++ +G ++ ++    +
Sbjct: 578 HAVWNYDGRILYNSGMYGFREEAALYDDTFQPYGQIFSMNADGSDKRMLTDSQW 631



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 93/296 (31%), Gaps = 80/296 (27%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV--- 239
           +      + S+ V+  DG   R +          P++SP+  ++ +     ED       
Sbjct: 217 TGWEHTQELSIYVIRPDGTGFRQVASRDGYCQGSPKWSPDGSRIVFYELTVEDTWGAHRP 276

Query: 240 ----------------------------------YLMDTRIDRAPK------------RI 253
                                             Y+  T I    K             +
Sbjct: 277 EDIGIAESQIVSVDVASGARTVHTSGPNLKVAPQYVSSTEIGYLVKGGPDEGLAYVSGTL 336

Query: 254 GNFRSMILAPRFSSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            + +  + +P ++ +G+  +        +     +YS D          +  F ++  + 
Sbjct: 337 PSVKRSLRSPVWTPDGRSVIYEKPDYTTRALDAPLYSWDADW-------DYRFCDVFPAL 389

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD------------KEASYFDPVWSPQ 357
           S D  ++   + + G   +  M+++G+DQK +                 A  F P WS  
Sbjct: 390 SKDG-RLAITNKQLGNSSIVTMKADGTDQKVVFDTAASGLDPALVAKGLAGAFRPTWSHD 448

Query: 358 GDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIF 406
              IAF         +     +  +  DGS   +L + S N   P++S  G  +++
Sbjct: 449 AKWIAFGVGGWFQTRATNTAVLVRVPSDGSSYEVLTDGSTNAGFPSYSEDGNKIVY 504



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 62/154 (40%), Gaps = 22/154 (14%)

Query: 313 SSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--G 368
             + V   +R G     LY+   +G++++R+SQ+    +   V S  G  + FT      
Sbjct: 50  GKKGVMLMNRIGPSASSLYISNVDGTNERRLSQNAAYDHHATV-SADGAWVYFTSERTGD 108

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               +     DGS  + LV DS +      SP G  + F   +  D  ++++ +DL  + 
Sbjct: 109 GNSCLYRAAVDGSNVQPLVVDSAMNDWAVPSPDGTKVAFVSTRSADRRTQIWLLDLRTKA 168

Query: 428 ETLINT----------------PAYASDPQWVGF 445
            T +                  P+++ D QW+ F
Sbjct: 169 LTDLTGTAALAGDPAGPDGHFRPSWSPDGQWIAF 202



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 55/292 (18%), Positives = 98/292 (33%), Gaps = 58/292 (19%)

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
             LG   +VT  +  +G D+  V    +D                 ++R      +  I 
Sbjct: 400 KQLGNSSIVT--MKADGTDQKVV----FDTAASGLDPALVAKGLAGAFRPTWSHDAKWI- 452

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
               G  G F +R                L  +  DG++   LT       F P +S + 
Sbjct: 453 --AFGVGGWFQTR----------ATNTAVLVRVPSDGSSYEVLTDGSTNAGF-PSYSEDG 499

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAM 282
            K+ Y  +  E+ LRV  + TR         +       P +S +GK  L + +      
Sbjct: 500 NKIVYRVWGQENGLRVLDLKTRTTTVLTTESDN-----LPDWSWDGKLILFTRRTSATNF 554

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+ ++       + LT++   +  A ++ D  +I++ S   G                  
Sbjct: 555 DVCTIKPDGTGLKVLTSSGANDAHAVWNYDG-RILYNSGMYG------------------ 595

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
             +EA+ +D  + P G              I  M  DGS +R+L +     +
Sbjct: 596 FREEAALYDDTFQPYG-------------QIFSMNADGSDKRMLTDSQWEDS 634


>gi|302882872|ref|XP_003040341.1| hypothetical protein NECHADRAFT_34811 [Nectria haematococca mpVI
           77-13-4]
 gi|256721219|gb|EEU34628.1| hypothetical protein NECHADRAFT_34811 [Nectria haematococca mpVI
           77-13-4]
          Length = 629

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 85/225 (37%), Gaps = 29/225 (12%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYAT 230
           D    I +++    SG +   L V + DG++ + L  +      F   +SP  + + +++
Sbjct: 7   DGKRGIFYLNRIAPSGSL---LYVANADGSDAKPLMNNGSAAFDFHASWSPGGKWIVFSS 63

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDL 289
               D               + +    S   A   S +G      S Q +   +I+  DL
Sbjct: 64  ERRADGQSDIYRVKPNGSELETLVQTDSFEDAGVLSPDGTTLAYVSTQGNYTANIWVKDL 123

Query: 290 QSNATERLTNTLFINIS---------ASYSPDSSQIVFESDR----------EGKEQ--- 327
           ++   + LTNT                ++SPD   I F SDR           G E    
Sbjct: 124 RTGIAKNLTNTASTRGDRSSPQGHFRPAWSPDGEWIAFSSDRNTEWTGHSDGTGWEHTQT 183

Query: 328 --LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             +Y+++ NGSD + ++     +   P WSP G  I ++  S E 
Sbjct: 184 LSIYIIRPNGSDFRAVASKPGYALGSPQWSPDGSRILYSSISTED 228



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 83/209 (39%), Gaps = 33/209 (15%)

Query: 268 NGKRALISVQK--DEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVFESDR- 322
           +GKR +  + +       +Y  +   +  + L N  +   +  AS+SP    IVF S+R 
Sbjct: 7   DGKRGIFYLNRIAPSGSLLYVANADGSDAKPLMNNGSAAFDFHASWSPGGKWIVFSSERR 66

Query: 323 -EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDG 380
            +G+  +Y ++ NGS+ + + Q  ++     V SP G  +A+    G     I V     
Sbjct: 67  ADGQSDIYRVKPNGSELETLVQ-TDSFEDAGVLSPDGTTLAYVSTQGNYTANIWVKDLRT 125

Query: 381 SQERLLVEDSNLQA----------PTWSPSGRSLIFSRKKDGDTGS-------------K 417
              + L   ++ +           P WSP G  + FS  ++ +                 
Sbjct: 126 GIAKNLTNTASTRGDRSSPQGHFRPAWSPDGEWIAFSSDRNTEWTGHSDGTGWEHTQTLS 185

Query: 418 LYSIDLNGRNETLINT-PAYA-SDPQWVG 444
           +Y I  NG +   + + P YA   PQW  
Sbjct: 186 IYIIRPNGSDFRAVASKPGYALGSPQWSP 214



 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 83/223 (37%), Gaps = 30/223 (13%)

Query: 222 NQQK-VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQK- 278
           + ++ + Y          +Y+ +     A   + N  +       +S  GK  + S ++ 
Sbjct: 7   DGKRGIFYLNRIAPSGSLLYVANADGSDAKPLMNNGSAAFDFHASWSPGGKWIVFSSERR 66

Query: 279 -DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGS 336
            D   DIY V    +  E L  T     +   SPD + + + S +      ++V      
Sbjct: 67  ADGQSDIYRVKPNGSELETLVQTDSFEDAGVLSPDGTTLAYVSTQGNYTANIWVKDLRTG 126

Query: 337 DQKRIS--------QDKEASYFDPVWSPQGDLIAFTKFSGEKF---------------AI 373
             K ++        +     +F P WSP G+ IAF+     ++               +I
Sbjct: 127 IAKNLTNTASTRGDRSSPQGHFRPAWSPDGEWIAFSSDRNTEWTGHSDGTGWEHTQTLSI 186

Query: 374 GVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDT 414
            +++ +GS  R +       L +P WSP G  +++S     DT
Sbjct: 187 YIIRPNGSDFRAVASKPGYALGSPQWSPDGSRILYSSISTEDT 229



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 90/250 (36%), Gaps = 41/250 (16%)

Query: 232 DDEDILRVY-LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL------ISVQKDEAMDI 284
           D +++  VY +  T  +     + +       P +S +G +           +      I
Sbjct: 382 DLKEVFDVYDVWSTDNETEVGIVKSGLGGAFQPTWSPDGSQIAVGFGVWFFNRNSNPASI 441

Query: 285 YSVDLQSNATERLTN--TLFINISASYSPDSSQIVF---ESDREGKEQLYVMQSNGSDQK 339
           Y  +   +    +T+  T       S+SPD +++V+    S  +    L ++        
Sbjct: 442 YLANATGDGFYNMTDIETDLNAGFPSFSPDGTKLVYRLWNSKDKIPLGLRILDLTTGKTT 501

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSG-----------EKFAIGVMKKDGSQERLLVE 388
            ++         P WSP G+ I FT+              ++F I  ++ DGS    + +
Sbjct: 502 NLT---SGWDNTPGWSPDGERIVFTRQVNWTSEYGSRWYEDRFDIMTIRPDGSDLTQVTD 558

Query: 389 D-SNLQAPTWSPSGRSLIFSRKKDG------------DTGSKLYSIDLNGRNETLINTPA 435
             +N     WS  GR +++S    G                ++  +D +G N+ ++    
Sbjct: 559 SPANDAHAVWSYDGR-ILWSTGMYGFRDESSQYENTFQPYGQIMVMDADGSNKRMLTDSM 617

Query: 436 Y-ASDPQWVG 444
           +  S P +V 
Sbjct: 618 WEDSMPLYVP 627



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 106/348 (30%), Gaps = 94/348 (27%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL----- 237
           +        S+ ++  +G++ R +       L  P++SP+  ++ Y++   ED       
Sbjct: 176 TGWEHTQTLSIYIIRPNGSDFRAVASKPGYALGSPQWSPDGSRILYSSISTEDTYGAHGV 235

Query: 238 ----------------------------------RVYLMDTRIDRAPKRIGNFRSMILA- 262
                                             + Y+ +        + G    +    
Sbjct: 236 SNQMEALSGQIESVDIATGLDIVEHTSGPYLKVGQHYIGNGDNIGYVVKAGPSEGINYTK 295

Query: 263 ---------------PRFSSNGKRALISVQ----KDEAMDIYSVDLQSNATERLTNTLFI 303
                          P +S +G + +  V     +  A  ++S D +           F+
Sbjct: 296 SDASHTAFLRSGVRNPSWSPDGTKVVYEVSSWDVRSPAKKLFSWDEEW-------EYRFM 348

Query: 304 NISASYSPDSSQIVFESDREGKEQLY-----------------VMQSNGSDQKRISQDKE 346
           ++   Y+  + ++VF   + G   +                  V  ++   +  I +   
Sbjct: 349 DVFPQYNKATERLVFTQKQLGNSSVVTSTTEYTDLKEVFDVYDVWSTDNETEVGIVKSGL 408

Query: 347 ASYFDPVWSPQGDLIA------FTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTW 397
              F P WSP G  IA      F   +    +I +    G     + +   D N   P++
Sbjct: 409 GGAFQPTWSPDGSQIAVGFGVWFFNRNSNPASIYLANATGDGFYNMTDIETDLNAGFPSF 468

Query: 398 SPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTPAYASDPQWVG 444
           SP G  L++      D     L  +DL     T + T  + + P W  
Sbjct: 469 SPDGTKLVYRLWNSKDKIPLGLRILDLTTGKTTNL-TSGWDNTPGWSP 515



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 23/156 (14%)

Query: 312 DSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFT--KF 366
           D  + +F  +R       LYV  ++GSD K +  +  A++ F   WSP G  I F+  + 
Sbjct: 7   DGKRGIFYLNRIAPSGSLLYVANADGSDAKPLMNNGSAAFDFHASWSPGGKWIVFSSERR 66

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL-N 424
           +  +  I  +K +GS+   LV+  + +     SP G +L +   + G+  + ++  DL  
Sbjct: 67  ADGQSDIYRVKPNGSELETLVQTDSFEDAGVLSPDGTTLAYVSTQ-GNYTANIWVKDLRT 125

Query: 425 GRNETLINT---------------PAYASDPQWVGF 445
           G  + L NT               PA++ D +W+ F
Sbjct: 126 GIAKNLTNTASTRGDRSSPQGHFRPAWSPDGEWIAF 161



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 71/184 (38%), Gaps = 30/184 (16%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYATYDDED--ILRVYLM 242
                 S+ + +  G     +T    D     P FSP+  K+ Y  ++ +D   L + ++
Sbjct: 434 RNSNPASIYLANATGDGFYNMTDIETDLNAGFPSFSPDGTKLVYRLWNSKDKIPLGLRIL 493

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-----------EAMDIYSVDLQS 291
           D    +              P +S +G+R + + Q +           +  DI ++    
Sbjct: 494 DLTTGKTTNLTS---GWDNTPGWSPDGERIVFTRQVNWTSEYGSRWYEDRFDIMTIRPDG 550

Query: 292 NATERLTNTLFINISASYSPDSSQIV-------------FESDREGKEQLYVMQSNGSDQ 338
           +   ++T++   +  A +S D   +              +E+  +   Q+ VM ++GS++
Sbjct: 551 SDLTQVTDSPANDAHAVWSYDGRILWSTGMYGFRDESSQYENTFQPYGQIMVMDADGSNK 610

Query: 339 KRIS 342
           + ++
Sbjct: 611 RMLT 614


>gi|149200423|ref|ZP_01877439.1| MdsD protein, putative [Lentisphaera araneosa HTCC2155]
 gi|149136492|gb|EDM24929.1| MdsD protein, putative [Lentisphaera araneosa HTCC2155]
          Length = 1121

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 77/198 (38%), Gaps = 19/198 (9%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +P  S NG + + S   D    I+    +    +R+T +  ++    +S D  +I FES
Sbjct: 25  YSPSLSPNGSQVIFSWNDD----IWISSSEGGLAKRMTQSKGLDYRPMFSHDGKKIAFES 80

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-----EKFAIGV 375
           +R G   L+VM + G   K++S + E  Y    W      +A+          +      
Sbjct: 81  NRLGPTYLFVMPTVGGPAKQVSFNSEG-YRLLQWFRDNKSLAYNSNRKLFVPRQGSLPYK 139

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK--------KDGDTGSKLYSIDLNGRN 427
           +     +   L+ +S ++    SP  + ++F+R+          G   S+++  D   + 
Sbjct: 140 LDTVSQETEELIFNSRMREFNLSPDEKKILFTREGSQNYRKAYRGSQASQIWLYDSETQQ 199

Query: 428 ETLINTPAY-ASDPQWVG 444
            T I    +    P W  
Sbjct: 200 YTKIIHEEWNNRTPLWSA 217



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 86/255 (33%), Gaps = 33/255 (12%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           I + P  SPN  +V ++  DD        + +      KR+   + +   P FS +GK+ 
Sbjct: 23  IPYSPSLSPNGSQVIFSWNDD------IWISSSEGGLAKRMTQSKGLDYRPMFSHDGKKI 76

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKEQ 327
                +     ++ +       ++++          +  D+  + + S+R+         
Sbjct: 77  AFESNRLGPTYLFVMPTVGGPAKQVSFNSEGYRLLQWFRDNKSLAYNSNRKLFVPRQGSL 136

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----------IGVMK 377
            Y + +   + + +  +     F+   SP    I FT+   + +           I +  
Sbjct: 137 PYKLDTVSQETEELIFNSRMREFN--LSPDEKKILFTREGSQNYRKAYRGSQASQIWLYD 194

Query: 378 KDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRK---------KDGDTGSKLYSIDLNGRN 427
            +  Q  +++ E+ N + P WS  G+   +             D      L      G +
Sbjct: 195 SETQQYTKIIHEEWNNRTPLWSADGKGFFYLSDESACNDLMFYDFKKKKSLLRYSGEGEH 254

Query: 428 ETLINTPAYASDPQW 442
              I+  +  S   W
Sbjct: 255 ILNISLSSDGSTLSW 269



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 81/221 (36%), Gaps = 27/221 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +  ++ +A         +Y+ D++    P RI +  S  + P FS++ +R        
Sbjct: 316 SMDGLEMTFAEDGL-----IYVSDSKF-CEPIRISDKDSFCIEPIFSNDFERIFYLKDNG 369

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYS-----------PDSSQIVFESDREGKEQL 328
           + M I  V+          N      S  YS           PD S++ F S   G   L
Sbjct: 370 QDMTIMQVERADKEKYWWQNH-AFETSEVYSYKGSIKDLNIAPDDSRLSFVS---GDGSL 425

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQ--ERL 385
           +  +     +K+I+        D  WSP      ++  +      I V+  D SQ    +
Sbjct: 426 WTYEIEKGIRKKITNT--WMEPDYSWSPDSQWFIYSCPNENYNSEIFVIPSDASQKAINI 483

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               ++ ++PTWS  G  + +   +     S +  + L G 
Sbjct: 484 SRNPASDRSPTWSKDGSMIAYVSDRS-RNDSDIILVYLKGE 523



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 68/173 (39%), Gaps = 17/173 (9%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA--------PKRIGNFRSMI 260
            +D    EP FS + +++ Y   + +D+  + +     ++            + +++  I
Sbjct: 345 DKDSFCIEPIFSNDFERIFYLKDNGQDMTIMQVERADKEKYWWQNHAFETSEVYSYKGSI 404

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIVF 318
                + +  R            +++ +++    +++TNT    +    S+SPDS   ++
Sbjct: 405 KDLNIAPDDSRLSFVS---GDGSLWTYEIEKGIRKKITNTW---MEPDYSWSPDSQWFIY 458

Query: 319 -ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
              +     +++V+ S+ S +        AS   P WS  G +IA+       
Sbjct: 459 SCPNENYNSEIFVIPSDASQKAINISRNPASDRSPTWSKDGSMIAYVSDRSRN 511



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 50/343 (14%), Positives = 103/343 (30%), Gaps = 80/343 (23%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQ 224
           +   +G  N R  +       G   + + +   D    +Y     ++     P +S + +
Sbjct: 169 LFTREGSQNYRKAY------RGSQASQIWL--YDSETQQYTKIIHEEWNNRTPLWSADGK 220

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG-----KRAL------ 273
              Y + D+     +   D +  ++  R       IL    SS+G     +R        
Sbjct: 221 GFFYLS-DESACNDLMFYDFKKKKSLLRYSGEGEHILNISLSSDGSTLSWRRLFDLYTWK 279

Query: 274 ---------------------------------ISVQKDEAMD-------IYSVDLQSNA 293
                                              V  D           IY  D +   
Sbjct: 280 HQSQKEAKKLEIYTQEDLNRNKTENRQVKGIDTFDVSMDGLEMTFAEDGLIYVSDSKFCE 339

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             R+++     I   +S D  +I +  D    + + +MQ   +D+++      A     V
Sbjct: 340 PIRISDKDSFCIEPIFSNDFERIFYLKDNG--QDMTIMQVERADKEKYWWQNHAFETSEV 397

Query: 354 WS-----------PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           +S           P    ++F    G    +   + +    + +         +WSP  +
Sbjct: 398 YSYKGSIKDLNIAPDDSRLSFVSGDGS---LWTYEIEKGIRKKITNTWMEPDYSWSPDSQ 454

Query: 403 SLIFSRKKDGDTGSKLYSI--DLNGRNETLINTPAYASDPQWV 443
             I+S   + +  S+++ I  D + +   +   PA    P W 
Sbjct: 455 WFIYS-CPNENYNSEIFVIPSDASQKAINISRNPASDRSPTWS 496



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 50/130 (38%), Gaps = 8/130 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV- 276
             +P+  ++++ + D        L    I++  ++      M     +S + +  + S  
Sbjct: 408 NIAPDDSRLSFVSGDGS------LWTYEIEKGIRKKITNTWMEPDYSWSPDSQWFIYSCP 461

Query: 277 QKDEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            ++   +I+ +    S     ++     + S ++S D S I + SDR   +   ++    
Sbjct: 462 NENYNSEIFVIPSDASQKAINISRNPASDRSPTWSKDGSMIAYVSDRSRNDSDIILVYLK 521

Query: 336 SDQKRISQDK 345
            +   IS  +
Sbjct: 522 GEDYEISPRQ 531



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 72/189 (38%), Gaps = 24/189 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              + + +   +G   + +T S+  + + P FS + +K+A+ +        +++M T   
Sbjct: 39  SWNDDIWISSSEGGLAKRMTQSK-GLDYRPMFSHDGKKIAFESNRLGPTY-LFVMPTVGG 96

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLF 302
            A +   N     L  ++  + K    +  +      +    Y +D  S  TE L     
Sbjct: 97  PAKQVSFNSEGYRLL-QWFRDNKSLAYNSNRKLFVPRQGSLPYKLDTVSQETEELIFN-S 154

Query: 303 INISASYSPDSSQIVFESDREGKE------------QLYVMQSNGSDQKRISQDKEASYF 350
                + SPD  +I+F   REG +            Q+++  S      +I  + E +  
Sbjct: 155 RMREFNLSPDEKKILFT--REGSQNYRKAYRGSQASQIWLYDSETQQYTKIIHE-EWNNR 211

Query: 351 DPVWSPQGD 359
            P+WS  G 
Sbjct: 212 TPLWSADGK 220



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 67/204 (32%), Gaps = 23/204 (11%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT----YDDEDILRVYLMDT 244
               L VM   G   + ++ + +      ++  + + +AY +    +        Y +DT
Sbjct: 84  GPTYLFVMPTVGGPAKQVSFNSEGYRLL-QWFRDNKSLAYNSNRKLFVPRQGSLPYKLDT 142

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALIS----------VQKDEAMDIYSVDLQSNAT 294
                 + I N R        S + K+ L +           +  +A  I+  D ++   
Sbjct: 143 VSQETEELIFNSRMREF--NLSPDEKKILFTREGSQNYRKAYRGSQASQIWLYDSETQQY 200

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPV 353
            ++ +  + N +  +S D     + SD      L         +  +    E  +  +  
Sbjct: 201 TKIIHEEWNNRTPLWSADGKGFFYLSDESACNDLMFYDFK-KKKSLLRYSGEGEHILNIS 259

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMK 377
            S  G  +++ +     F +   K
Sbjct: 260 LSSDGSTLSWRRL----FDLYTWK 279



 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 28/75 (37%), Gaps = 3/75 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE---DILR 238
            S  +    + + V+  D +               P +S +   +AY +       DI+ 
Sbjct: 458 YSCPNENYNSEIFVIPSDASQKAINISRNPASDRSPTWSKDGSMIAYVSDRSRNDSDIIL 517

Query: 239 VYLMDTRIDRAPKRI 253
           VYL     + +P++I
Sbjct: 518 VYLKGEDYEISPRQI 532


>gi|149916648|ref|ZP_01905150.1| peptidase S9, prolyl oligopeptidase active site region
           [Plesiocystis pacifica SIR-1]
 gi|149822365|gb|EDM81754.1| peptidase S9, prolyl oligopeptidase active site region
           [Plesiocystis pacifica SIR-1]
          Length = 725

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 61/339 (17%), Positives = 120/339 (35%), Gaps = 82/339 (24%)

Query: 176 RILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           RILF +    + +G     + ++  DG  +R +T   +     PR+ P+ +   + +   
Sbjct: 61  RILFTATRYDLAAGEQNTDIYLVHADGTGLRAMTRF-EGSDGSPRWLPDGRSFVFVSTRS 119

Query: 234 E-DILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALI----------------- 274
           + D     L    ID   P+R+    + + +P  S +G R                    
Sbjct: 120 DADSEGAQLWRMAIDGGEPERLTGVSTGVGSPEVSPDGARVAFVTTVFPEHGDDDLANAE 179

Query: 275 ------------------------SVQKDEAMDIYSVDLQSNATERLT----NTLFINIS 306
                                   +    +   I+ ++L+S A   +T    ++     S
Sbjct: 180 AGTALAENPIQAHIADDLLYRHWTAYADLQRSHIFVLELESGAVADVTPGDFDSPAFGGS 239

Query: 307 ASYSPDSSQIVFESDREGKE-QLYVMQSN----------------------GSDQKRISQ 343
            ++SPD  ++ FES+R+    Q +    +                       ++   I+ 
Sbjct: 240 FAFSPDGKELCFESNRDPNNAQSWTTNKDLFVVPLVAEQAGPRGAAALAKAWAEPLNITD 299

Query: 344 DKEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVEDSNLQAP--T 396
             EA    P +SP G  IAF + +      ++  + V  ++  +  +L E  +       
Sbjct: 300 ANEAYDGAPAYSPDGRYIAFRRQAIPAYESDRARLAVYDRERGETTVLTEGFDNWVTDLA 359

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           W+P   S+IF    +G T   L+ ++  G   T +  PA
Sbjct: 360 WAPDSASVIFEADVEGRTP--LFRVERAGGAITKLALPA 396



 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 87/273 (31%), Gaps = 88/273 (32%)

Query: 259 MILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            + AP++S +G+R L +  +      ++  DIY V         +T     + S  + PD
Sbjct: 49  SVGAPQWSPDGERILFTATRYDLAAGEQNTDIYLVHADGTGLRAMTRFEGSDGSPRWLPD 108

Query: 313 SSQIVFESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-- 366
               VF S R   +    QL+ M  +G + +R++         P  SP G  +AF     
Sbjct: 109 GRSFVFVSTRSDADSEGAQLWRMAIDGGEPERLT-GVSTGVGSPEVSPDGARVAFVTTVF 167

Query: 367 ---------------------------------------SGEKFAIGVMKKDGSQERLLV 387
                                                    ++  I V++ +      + 
Sbjct: 168 PEHGDDDLANAEAGTALAENPIQAHIADDLLYRHWTAYADLQRSHIFVLELESGAVADVT 227

Query: 388 EDSNLQAP------TWSPSGRSLIFSRKKDGD------TGSKLYSI-------------- 421
              +  +P       +SP G+ L F   +D +      T   L+ +              
Sbjct: 228 -PGDFDSPAFGGSFAFSPDGKELCFESNRDPNNAQSWTTNKDLFVVPLVAEQAGPRGAAA 286

Query: 422 ---------DLNGRNETLINTPAYASDPQWVGF 445
                    ++   NE     PAY+ D +++ F
Sbjct: 287 LAKAWAEPLNITDANEAYDGAPAYSPDGRYIAF 319



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 92/256 (35%), Gaps = 47/256 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMD---------------------TRIDRAPKRIGNF 256
            FSP+ +++ + +  D +  + +  +                      +    P  I + 
Sbjct: 241 AFSPDGKELCFESNRDPNNAQSWTTNKDLFVVPLVAEQAGPRGAAALAKAWAEPLNITDA 300

Query: 257 -RSMILAPRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLF-INISASY 309
             +   AP +S +G+      Q       +   +   D +   T  LT          ++
Sbjct: 301 NEAYDGAPAYSPDGRYIAFRRQAIPAYESDRARLAVYDRERGETTVLTEGFDNWVTDLAW 360

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-G 368
           +PDS+ ++FE+D EG+  L+ ++  G    +++     S+      P G  +AFT    G
Sbjct: 361 APDSASVIFEADVEGRTPLFRVERAGGAITKLALPAVRSWDVG---PAG-ALAFTHSGIG 416

Query: 369 EKFAIGVMKKDGSQERLLVEDSN------LQAPT---W--SPSGRSLI-FSRKKDGDTGS 416
               +      G + R L   ++         P    W  S  GR +  +  K  G    
Sbjct: 417 TPVELYTADAQGRRGRRLTGFNDAIVERVDMRPAEELWIESKDGRKVHTWLVKPHGFDPK 476

Query: 417 KLY--SIDLNGRNETL 430
           K Y   ++++G  ++ 
Sbjct: 477 KTYPLIVNVHGGPQSQ 492



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 63/198 (31%), Gaps = 13/198 (6%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V DR+      LT   D  + +  ++P+   V +    +       +        
Sbjct: 331 RARLAVYDRERGETTVLTEGFDNWVTDLAWAPDSASVIFEADVEGRTPLFRVERAGGAIT 390

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISAS 308
              +   RS  + P  +        +        ++Y+ D Q     RLT      +   
Sbjct: 391 KLALPAVRSWDVGPAGA-----LAFTHSGIGTPVELYTADAQGRRGRRLTGFNDAIVERV 445

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW----SPQGDLIAFT 364
               + ++  ES    K   ++++ +G D K+        +  P      S +GD   + 
Sbjct: 446 DMRPAEELWIESKDGRKVHTWLVKPHGFDPKKTYPLIVNVHGGPQSQWQDSFRGDWQVY- 504

Query: 365 KFSGEKFAIGVMKKDGSQ 382
              G  + +      GS 
Sbjct: 505 --PGSGYVLAFPNPTGSS 520


>gi|119773984|ref|YP_926724.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Shewanella amazonensis SB2B]
 gi|119766484|gb|ABL99054.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Shewanella amazonensis SB2B]
          Length = 700

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 86/231 (37%), Gaps = 8/231 (3%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A A     DI     +    D + +R+      I    +  +G+R + S +
Sbjct: 321 AFSPDGQTLAIAR-RFGDISEDIFLRQLADGSERRLTQGIEDIRGLSWHRDGRRLVYSTE 379

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +      Y +D ++     L +   ++    + PDS ++VF        QL  M      
Sbjct: 380 EAGNRGGYLIDTETGEITAL-DQDGLSY-PRFVPDSDELVF-YHYNNHRQLVSMHPFAEV 436

Query: 338 QKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQA 394
            +        ++      +SP+   + F     E   I     DG + ++         +
Sbjct: 437 PQAPFPMIYGNFSQRYADYSPEARRLVFVSNESEHNEIWTSDVDGQRRQMHTSLKRQATS 496

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVG 444
           P WS  G  + F        G+KL+ +D+   +  ++ +P      P+W G
Sbjct: 497 PAWSHDGSRIAFVAADTNHEGNKLHILDIRDNSIRVVASPYINHGRPEWSG 547



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 98/247 (39%), Gaps = 12/247 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR-IDRAPKRIGNFRSMILAPRF 265
             S       P  SP+ + + Y          ++ +D    D +P+++    S  L   +
Sbjct: 168 LTSDGGSERFPSVSPDGRFLVYGGQQPGKNGSLFQLDLEHPDASPRQLTPDSSDELRAVW 227

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--ESDRE 323
           S++GK             I  +DL+      L +   +  +   + D + + F   +  +
Sbjct: 228 SNDGKSLYFPSASAGECKITRLDLKDGQLTPLADCTSVTTAIDLTVDGTGLAFITTNAPQ 287

Query: 324 GKEQLYVMQSNGSDQK--RISQDKE--ASYFDPVWSPQGDLIAFTKFSGEKFA-IGV-MK 377
               +Y++     + +  R+S D E      D  +SP G  +A  +  G+    I +   
Sbjct: 288 KNAGIYLLDLTEKEAEPVRLSCDTECPYRDRDFAFSPDGQTLAIARRFGDISEDIFLRQL 347

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            DGS+ RL     +++  +W   GR L++S ++ G+ G   Y ID      T ++     
Sbjct: 348 ADGSERRLTQGIEDIRGLSWHRDGRRLVYSTEEAGNRGG--YLIDTETGEITALDQDG-L 404

Query: 438 SDPQWVG 444
           S P++V 
Sbjct: 405 SYPRFVP 411



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 72/186 (38%), Gaps = 19/186 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  +D+DG             L  PRF P+  ++ +  Y++   L        + +AP 
Sbjct: 395 EITALDQDG-------------LSYPRFVPDSDELVFYHYNNHRQLVSMHPFAEVPQAPF 441

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +           +S   +R +    + E  +I++ D+     +  T+      S ++S 
Sbjct: 442 PMIYGNFSQRYADYSPEARRLVFVSNESEHNEIWTSDVDGQRRQMHTSLKRQATSPAWSH 501

Query: 312 DSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           D S+I F +   + EG  +L+++     +  R+      ++  P WS     +  +   G
Sbjct: 502 DGSRIAFVAADTNHEGN-KLHILDIRD-NSIRVVASPYINHGRPEWSGDDSFLLASTVDG 559

Query: 369 -EKFAI 373
             +F +
Sbjct: 560 LTRFHL 565



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 75/248 (30%), Gaps = 35/248 (14%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSES------VVSGIIKNSLCVMDRDGANIRYLTPS 209
           H  ++          G+F+ R    S        V +    N +   D DG   R +  S
Sbjct: 431 HPFAEVPQAPFPMIYGNFSQRYADYSPEARRLVFVSNESEHNEIWTSDVDGQR-RQMHTS 489

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             +    P +S +  ++A+   D         +    D + + + +       P +S + 
Sbjct: 490 LKRQATSPAWSHDGSRIAFVAADTNHEGNKLHILDIRDNSIRVVASPYINHGRPEWSGD- 548

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPD--------SSQIVFES 320
              L++   D                 LT     N   +  SP            + F S
Sbjct: 549 DSFLLASTVDG----------------LTRFHLDNKPPTLVSPIMVRRLQVLGDWLYF-S 591

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              G   L+ M   G   +++   K  S     W+   D + F +       +       
Sbjct: 592 YSTGPRGLWRMPWQGGKPEQVLGAKLMSDGYN-WTVADDGVFFRQRHSGSALLSYFDFAR 650

Query: 381 SQERLLVE 388
           ++ R L+E
Sbjct: 651 AEVRPLIE 658



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLINTPAYA 437
             +RL  +  + + P+ SP GR L++  ++ G  GS L+ +DL   +     L    +  
Sbjct: 164 GVDRLTSDGGSERFPSVSPDGRFLVYGGQQPGKNGS-LFQLDLEHPDASPRQLTPDSSDE 222

Query: 438 SDPQWV 443
               W 
Sbjct: 223 LRAVWS 228


>gi|315128152|ref|YP_004070155.1| protease [Pseudoalteromonas sp. SM9913]
 gi|315016665|gb|ADT70003.1| protease [Pseudoalteromonas sp. SM9913]
          Length = 1073

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 57/270 (21%), Positives = 103/270 (38%), Gaps = 15/270 (5%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
             N   L+  ++      K S+ +       + Y     D I      S + ++  +   
Sbjct: 277 YENGGYLYRFDAKTQKSAKLSINIAGVRQYAMPYSKNVSDFIDSM-SLSHDGKRAVFTAR 335

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ- 290
            +   + +    TR     +     +S  +   +S NG+       +    +IY  D   
Sbjct: 336 GELFSVPIKQGPTRNLSYTE-----KSREIDASWSPNGRYITYMSDESGEYEIYLKDRSK 390

Query: 291 SNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD--KEA 347
           +NA ++LT+   I   +  +SPDSS+++F    +    L+ + +    Q +I      E 
Sbjct: 391 NNAIKQLTSNGTIWRFTPIWSPDSSKLLFS---DKNNTLWWLDAKSGKQHKIDTGIYDED 447

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLI 405
                 WSP    I F K +  ++A +        +   L ++ SN Q PT+SP G+ L 
Sbjct: 448 GITQYTWSPNSQDIVFVKNNENRYASLWHYNLKKKKVTRLTDEMSNEQNPTFSPDGQYLY 507

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           FS ++D +     Y  D      T I   A
Sbjct: 508 FSSERDFNLAFSSYEFDYMFNRATRIYAAA 537



 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 76/190 (40%), Gaps = 30/190 (15%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + DIY  + Q+  ++RLT+ +       +SPD  +I F ++  G  Q+YV+ S+GS+ K+
Sbjct: 45  SGDIYIANTQTGESKRLTDHIGFETFPKFSPDGKRIAFSAEYNGSRQIYVINSDGSNLKQ 104

Query: 341 ISQDKEASYFDPV---------WSPQGDLIAFTKFS---GEKF-AIGVMKKDGSQERLLV 387
           ++   +     P          W+  G  + F       G++     ++  DG  E+ L 
Sbjct: 105 LTYYNDVGPMPPRGGFDYRVLDWTADGKNVVFRANRTPWGKRMGRPYMVPADGGLEQPLA 164

Query: 388 ---EDSNLQAPTWSPSGRSLIFS---------RKKDGDTGSKLYSIDLNGRN-ETLINTP 434
                  +     SP G   +++         ++  G     ++  DL     E L    
Sbjct: 165 IPETGGGML----SPDGSKYVYTPIDREFRTWKRTRGGRAQDVWIYDLEKNTSEQLTTNR 220

Query: 435 AYASDPQWVG 444
           A    P WVG
Sbjct: 221 ATDQQPTWVG 230



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 85/222 (38%), Gaps = 38/222 (17%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +Y+ +T+     KR+ +       P+FS +GKR   S + + +  IY ++   +  ++LT
Sbjct: 48  IYIANTQTGE-SKRLTDHIGFETFPKFSPDGKRIAFSAEYNGSRQIYVINSDGSNLKQLT 106

Query: 299 NTLFINISA------------SYSPDSSQIVFESDRE--GK--EQLYVMQSNGSDQKRIS 342
              + ++               ++ D   +VF ++R   GK   + Y++ ++G  ++ ++
Sbjct: 107 --YYNDVGPMPPRGGFDYRVLDWTADGKNVVFRANRTPWGKRMGRPYMVPADGGLEQPLA 164

Query: 343 QDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVMKKD-GSQERLLVEDS 390
             +       + SP G    +T              G    + +   +  + E+L    +
Sbjct: 165 IPETG---GGMLSPDGSKYVYTPIDREFRTWKRTRGGRAQDVWIYDLEKNTSEQLTTNRA 221

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             Q PTW      + F   +  D    LY        + L N
Sbjct: 222 TDQQPTWVGDN--IYFVSDR--DYTLNLYQYRKGSEPKKLTN 259



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 60/371 (16%), Positives = 112/371 (30%), Gaps = 101/371 (27%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            ++D I      +      RI F +E   S      + V++ DG+N++ LT   D     
Sbjct: 60  RLTDHIGFETFPKFSPDGKRIAFSAEYNGS----RQIYVINSDGSNLKQLTYYNDVGPMP 115

Query: 217 PR---------FSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILA 262
           PR         ++ + + V +               +   D  +++          M   
Sbjct: 116 PRGGFDYRVLDWTADGKNVVFRANRTPWGKRMGRPYMVPADGGLEQPLAIPETGGGM--- 172

Query: 263 PRFSSNGKRALIS-----------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
              S +G + + +            +   A D++  DL+ N +E+LT     +   ++  
Sbjct: 173 --LSPDGSKYVYTPIDREFRTWKRTRGGRAQDVWIYDLEKNTSEQLTTNRATDQQPTWV- 229

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP--------------- 356
               I F SDR+    LY  +  GS+ K+++  K      P   P               
Sbjct: 230 -GDNIYFVSDRDYTLNLYQYR-KGSEPKKLTNYKNFDVLWPSAGPNAIVYENGGYLYRFD 287

Query: 357 --------------------------------------QGDLIAFTKFSGEKFAIGVMKK 378
                                                  G    FT        +  +  
Sbjct: 288 AKTQKSAKLSINIAGVRQYAMPYSKNVSDFIDSMSLSHDGKRAVFTARG----ELFSVPI 343

Query: 379 DGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPA 435
                R L   E S     +WSP+GR + +   + G+   ++Y  D +  N    + +  
Sbjct: 344 KQGPTRNLSYTEKSREIDASWSPNGRYITYMSDESGE--YEIYLKDRSKNNAIKQLTSNG 401

Query: 436 --YASDPQWVG 444
             +   P W  
Sbjct: 402 TIWRFTPIWSP 412



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 110/294 (37%), Gaps = 35/294 (11%)

Query: 90  KITNPDSIPRFQD----WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF 145
           K + P  +  +++    W S G   +V               F   D K +K     K  
Sbjct: 250 KGSEPKKLTNYKNFDVLWPSAGPNAIVY------ENGGYLYRF---DAKTQK---SAKLS 297

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
            + A  R+ A   S ++   I       + +    +           L  +       R 
Sbjct: 298 INIAGVRQYAMPYSKNVSDFIDSMSLSHDGKRAVFTARG-------ELFSVPIKQGPTRN 350

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPR 264
           L+ +      +  +SPN + + Y + D+     +YL D   + A K++ +  ++    P 
Sbjct: 351 LSYTEKSREIDASWSPNGRYITYMS-DESGEYEIYLKDRSKNNAIKQLTSNGTIWRFTPI 409

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESD 321
           +S +  + L S   D+   ++ +D +S    ++   ++        ++SP+S  IVF  +
Sbjct: 410 WSPDSSKLLFS---DKNNTLWWLDAKSGKQHKIDTGIYDEDGITQYTWSPNSQDIVFVKN 466

Query: 322 REGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            E +   L+          R++ D+ ++  +P +SP G  + F+      F + 
Sbjct: 467 NENRYASLWHYNLKKKKVTRLT-DEMSNEQNPTFSPDGQYLYFSSERD--FNLA 517


>gi|256421777|ref|YP_003122430.1| peptidase S41 [Chitinophaga pinensis DSM 2588]
 gi|256036685|gb|ACU60229.1| peptidase S41 [Chitinophaga pinensis DSM 2588]
          Length = 1076

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 73/200 (36%), Gaps = 28/200 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +GK      + D    IY VD+       +T     ++   +S D   + F SDR
Sbjct: 29  PAISPDGKTIAFGYKGD----IYRVDVNGGVAVPVTIHEAQDMMPVWSHDGKYLAFASDR 84

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF- 371
            G   ++VM + G    R++ +  AS +   +SP    + F           +FS   F 
Sbjct: 85  YGNFDVFVMPATGGTPVRLTYNS-ASDYPYDFSPDNKQVLFGSSRNAPAASVRFSSGLFA 143

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTGSKLYSI 421
            +  +   G +  LLV  +  +   ++  G  +IF  +K                 ++  
Sbjct: 144 NLYTVPVTGGRS-LLVSAAGAENAHYNSKGTQIIFQDRKGYEDPWRKHHTSAVTRDIWVF 202

Query: 422 DLNGRN-ETLINTPAYASDP 440
           D+  +  + +        +P
Sbjct: 203 DVAAKTYKQVSGYEGEDREP 222



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 82/257 (31%), Gaps = 30/257 (11%)

Query: 182 ESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            ++  G     L V    DG +           + +    P+ +++A+    +       
Sbjct: 285 YTLKEGQQPKKLAVQIFNDGRSSVTKPIPISGNVTQFAMRPDGKEMAFVARGE------V 338

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-------- 292
            + +      KRI N      +  +S +GK+ + + +++   D+Y   +           
Sbjct: 339 FVTSVEGNMTKRITNTPQQERSVAWSPDGKKLVYAAERNGNWDVYQTTIVRAEEPYFFAA 398

Query: 293 ---ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-- 347
                E L  T        +SPD  +I F  DR     L V        + +        
Sbjct: 399 TLLKEEPLIATDAEEFQPVFSPDGKEIAFVEDR---NVLRVYNIASKKSRTLLPAGRNFS 455

Query: 348 ---SYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPS 400
                ++  WSP    I      G       G++  DG  + +  ++         W+  
Sbjct: 456 YSDGDWEFAWSPDSKWIVTDDHQGYFNVTNAGIIPADGKGQTIYPVMSGFGEGNTKWASD 515

Query: 401 GRSLIFSRKKDGDTGSK 417
           G+ + +   +DG  G  
Sbjct: 516 GKIMTWLSDRDGRRGLA 532



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 59/336 (17%), Positives = 119/336 (35%), Gaps = 41/336 (12%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  ++DV  +     K+        R+      +DIY     EKG     +   S    +
Sbjct: 198 DIWVFDVAAKTY---KQVSGYEGEDREPLFAGDNDIY--YLSEKGGIAQNLFKASAIDKN 252

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            + + +          +R+L+ S D +L    F+ N +            L V + +   
Sbjct: 253 KMQQLTKFEKHP----VRHLSKSDDNLLC---FTWNGEIYTLKEGQQPKKLAVQIFNDGR 305

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               K I      +       +GK      +     +++   ++ N T+R+TNT     S
Sbjct: 306 SSVTKPI-PISGNVTQFAMRPDGKEMAFVARG----EVFVTSVEGNMTKRITNTPQQERS 360

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ----------DKEASYFDPVWSP 356
            ++SPD  ++V+ ++R G   +Y      +++                 +A  F PV+SP
Sbjct: 361 VAWSPDGKKLVYAAERNGNWDVYQTTIVRAEEPYFFAATLLKEEPLIATDAEEFQPVFSP 420

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLL--------VEDSNLQAPTWSPSGRSLIFSR 408
            G  IAF +       + V      + R L          D + +   WSP  + ++   
Sbjct: 421 DGKEIAFVEDRN---VLRVYNIASKKSRTLLPAGRNFSYSDGDWEF-AWSPDSKWIVTDD 476

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDP--QW 442
            +     +    I  +G+ +T+    +   +   +W
Sbjct: 477 HQGYFNVTNAGIIPADGKGQTIYPVMSGFGEGNTKW 512



 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 73/229 (31%), Gaps = 34/229 (14%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               Q L  P  SP+ + +A+      DI RV +           +    +  + P +S 
Sbjct: 20  QDNAQWLRYPAISPDGKTIAFGY--KGDIYRVDVN----GGVAVPVTIHEAQDMMPVWSH 73

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-- 325
           +GK    +  +    D++ +        RLT     +    +SPD+ Q++F S R     
Sbjct: 74  DGKYLAFASDRYGNFDVFVMPATGGTPVRLTYNSASDYPYDFSPDNKQVLFGSSRNAPAA 133

Query: 326 ---------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------T 364
                      LY +   G     +S     +     ++ +G  I F             
Sbjct: 134 SVRFSSGLFANLYTVPVTGGRSLLVSAAGAENA---HYNSKGTQIIFQDRKGYEDPWRKH 190

Query: 365 KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDG 412
             S     I V        + +   +   + P ++     + +  +K G
Sbjct: 191 HTSAVTRDIWVFDVAAKTYKQVSGYEGEDREPLFAGDND-IYYLSEKGG 238



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 69/206 (33%), Gaps = 25/206 (12%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  + V   +G N+     +  Q      +SP+ +K+ YA   + +   VY         
Sbjct: 335 RGEVFVTSVEG-NMTKRITNTPQQERSVAWSPDGKKLVYAAERNGN-WDVYQTTIVRAEE 392

Query: 250 P----------KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-- 297
           P          + +    +    P FS +GK       ++    +   ++ S  +  L  
Sbjct: 393 PYFFAATLLKEEPLIATDAEEFQPVFSPDGKEIAFVEDRN---VLRVYNIASKKSRTLLP 449

Query: 298 ----TNTLFINISASYSPDSSQIVFESDREGKEQLY---VMQSNGSDQKRISQDKEASYF 350
                +    +   ++SPDS  IV   D +G   +    ++ ++G  Q            
Sbjct: 450 AGRNFSYSDGDWEFAWSPDSKWIV-TDDHQGYFNVTNAGIIPADGKGQTIYPVMSGFGEG 508

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +  W+  G ++ +      +  +   
Sbjct: 509 NTKWASDGKIMTWLSDRDGRRGLARQ 534



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSG 401
           QD       P  SP G  IAF    G K  I  +  +G     +   ++    P WS  G
Sbjct: 20  QDNAQWLRYPAISPDGKTIAF----GYKGDIYRVDVNGGVAVPVTIHEAQDMMPVWSHDG 75

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + L F+  + G+    ++ +   G     +   + +  P
Sbjct: 76  KYLAFASDRYGNF--DVFVMPATGGTPVRLTYNSASDYP 112



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 104/287 (36%), Gaps = 44/287 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV-YLMDTRIDRAP 250
            + VM   G     LT       +   FSP+ ++V + +  +     V +      +   
Sbjct: 89  DVFVMPATGGTPVRLT-YNSASDYPYDFSPDNKQVLFGSSRNAPAASVRFSSGLFANLYT 147

Query: 251 KRIGNFRSMILAPR------FSSNGKRALISVQKDE------------AMDIYSVDLQSN 292
             +   RS++++        ++S G + +   +K                DI+  D+ + 
Sbjct: 148 VPVTGGRSLLVSAAGAENAHYNSKGTQIIFQDRKGYEDPWRKHHTSAVTRDIWVFDVAAK 207

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQS-NGSDQKRISQDKEASYF 350
             ++++     +    ++ D+  I + S++ G  + L+   + + +  +++++ ++    
Sbjct: 208 TYKQVSGYEGEDREPLFAGDND-IYYLSEKGGIAQNLFKASAIDKNKMQQLTKFEKHPVR 266

Query: 351 DPVWSPQGDLIAFTKFSGEKF---------AIGVM---KKDGSQERLLVEDSNLQAPTWS 398
               S   +L+ FT ++GE +          + V        S  + +    N+      
Sbjct: 267 HLSKSDD-NLLCFT-WNGEIYTLKEGQQPKKLAVQIFNDGRSSVTKPIPISGNVTQFAMR 324

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
           P G+ + F  +       +++   + G   + + NTP       W  
Sbjct: 325 PDGKEMAFVAR------GEVFVTSVEGNMTKRITNTPQQERSVAWSP 365



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 60/154 (38%), Gaps = 10/154 (6%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSS 267
           D   F+P FSP+ +++A+   +D ++LRVY + ++  R     G   ++        +S 
Sbjct: 410 DAEEFQPVFSPDGKEIAFV--EDRNVLRVYNIASKKSRTLLPAGRNFSYSDGDWEFAWSP 467

Query: 268 NGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           + K  +    +         I   D +      + +      +  ++ D   + + SDR+
Sbjct: 468 DSKWIVTDDHQGYFNVTNAGIIPADGKGQTIYPVMSGFG-EGNTKWASDGKIMTWLSDRD 526

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           G+  L    S   D   +  D+EA     +    
Sbjct: 527 GRRGLARQGSTEVDIFGVFFDQEAYDRFKLSKDD 560


>gi|197123385|ref|YP_002135336.1| hypothetical protein AnaeK_2985 [Anaeromyxobacter sp. K]
 gi|196173234|gb|ACG74207.1| WD40 domain protein beta Propeller [Anaeromyxobacter sp. K]
          Length = 703

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/252 (19%), Positives = 94/252 (37%), Gaps = 11/252 (4%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K +L  +            S   +     +SP +    Y  Y         L   +  
Sbjct: 422 SPKRTLWRVPLGPDRADLAAASPIPLTTGNGWSP-RLGPGYLVYLSAKGAGDGLWKLQDG 480

Query: 248 RAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            + +      + +  AP    +G+      ++     +  VD        +T+ L ++ +
Sbjct: 481 ASTELWSQPGARIAGAPAVRRDGRTIAFWTREGGRTRLRVVDADGTGARVVTDALQLSGA 540

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++ PD   I   +  EG  +L+ +  +G +   +  +  A   DP W+P GDL+AFT  
Sbjct: 541 PAWMPDGRSIAVGAIVEGAPRLFRVPLDGGEPAALVAEPSA---DPAWAPAGDLLAFTGA 597

Query: 367 S-GEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             G  F +  +  DGS  R+  L      +   + P GRS+     +       L ++DL
Sbjct: 598 DVGTTFPLRAVNADGSARRMPPLTLTRGARHVAFLPDGRSIAVL--RGEIRRKHLAAVDL 655

Query: 424 -NGRNETLINTP 434
            +G +  L+  P
Sbjct: 656 ASGASRPLVVLP 667



 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 73/212 (34%), Gaps = 8/212 (3%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DGA+    +    +I   P    + + +A+ T +        +         + + +  
Sbjct: 478 QDGASTELWSQPGARIAGAPAVRRDGRTIAFWTREGGRTRLRVVDADGTGA--RVVTDAL 535

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            +  AP +  +G+   +    + A  ++ V L       L      +   +++P    + 
Sbjct: 536 QLSGAPAWMPDGRSIAVGAIVEGAPRLFRVPLDGGEPAALVAEPSAD--PAWAPAGDLLA 593

Query: 318 FE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           F  +D      L  + ++GS ++              + P G  IA  +    +  +  +
Sbjct: 594 FTGADVGTTFPLRAVNADGSARRMPPLTLTRGARHVAFLPDGRSIAVLRGEIRRKHLAAV 653

Query: 377 KKDGSQER---LLVEDSNLQAPTWSPSGRSLI 405
                  R   +L  D ++     SP GR L+
Sbjct: 654 DLASGASRPLVVLPPDFDVGDFDVSPDGRELV 685



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 83/249 (33%), Gaps = 56/249 (22%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D         + +F  +  A   S++G+       +   +D++   + S   + LT    
Sbjct: 155 DPLSGARFAPLTDFGGVEQAAAISADGRFVAFLSDRAGRVDVWLTQVGSGQFQDLTRGSA 214

Query: 303 IN-ISAS-----YSPDSSQIVF-ESDREGKE----QLYVMQSNGS--------------- 336
              ++ S     +SPD + + F    R G       ++ +   G                
Sbjct: 215 PELVNPSIRTLGFSPDGALVTFWARGRTGSSPPDIGIWAVPLLGGPPRPYLEGAAEYAWT 274

Query: 337 --------------------------DQKRISQDKEASYFD-PVWSPQGDLIAFTKFS-G 368
                                     + +RI       +    VWSP    I F + +  
Sbjct: 275 RDGTRLVHHTPGPGDPMYVSEAGRPHEARRIFSAPSGLHAHFQVWSPDQAFIYFVQGALP 334

Query: 369 EKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           ++  +  ++ DGS  ERL   D  +  P ++   R+L++       +G  L+++D+ GR 
Sbjct: 335 DRLDLWRIRPDGSAPERLTHHDGLVSHPVFA-DERTLLYLATDPDGSGPWLHALDVEGRA 393

Query: 428 ETLINTPAY 436
              +   A 
Sbjct: 394 TRRVAPGAG 402



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/327 (12%), Positives = 101/327 (30%), Gaps = 61/327 (18%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
             D      +      S      +  +   G   R       +      ++ +  ++ + 
Sbjct: 228 SPDGALVTFWARGRTGSSPPDIGIWAVPLLGGPPRPYLEGAAEY----AWTRDGTRLVHH 283

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALIS-VQKDEAMDIYS 286
           T    D +  Y+ +       +RI +  S + A    +S +            + +D++ 
Sbjct: 284 TPGPGDPM--YVSEAGRPHEARRIFSAPSGLHAHFQVWSPDQAFIYFVQGALPDRLDLWR 341

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDK 345
           +    +A ERLT+   +     ++ + + +   +D +G    L+ +   G   +R++   
Sbjct: 342 IRPDGSAPERLTHHDGLVSHPVFADERTLLYLATDPDGSGPWLHALDVEGRATRRVAP-G 400

Query: 346 EASYFDPVWSPQGDLIA-----------------------------------FTKFSGEK 370
              Y     S  G  +                                    ++   G  
Sbjct: 401 AGRYTSLAASADGRRLVLTQASPKRTLWRVPLGPDRADLAAASPIPLTTGNGWSPRLGPG 460

Query: 371 FAIGV-MKKDGSQERLLVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKL 418
           + + +  K  G     L + ++ +           AP     GR++ F  ++ G T  +L
Sbjct: 461 YLVYLSAKGAGDGLWKLQDGASTELWSQPGARIAGAPAVRRDGRTIAFWTREGGRT--RL 518

Query: 419 YSIDLNGRNETLINTPAY-ASDPQWVG 444
             +D +G    ++      +  P W+ 
Sbjct: 519 RVVDADGTGARVVTDALQLSGAPAWMP 545



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 61/172 (35%), Gaps = 21/172 (12%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            L       LT+   +  +A+ S D   + F SDR G+  +++ Q      + +++    
Sbjct: 156 PLSGARFAPLTDFGGVEQAAAISADGRFVAFLSDRAGRVDVWLTQVGSGQFQDLTRGSAP 215

Query: 348 SYFDPV-----WSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              +P      +SP G L+ F     T  S     I  +   G   R  +E +   A  W
Sbjct: 216 ELVNPSIRTLGFSPDGALVTFWARGRTGSSPPDIGIWAVPLLGGPPRPYLEGAAEYA--W 273

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRN---ETLINTPA--YASDPQWVG 444
           +  G  L+      GD       +   GR      + + P+  +A    W  
Sbjct: 274 TRDGTRLVHHTPGPGDPMY----VSEAGRPHEARRIFSAPSGLHAHFQVWSP 321


>gi|332533051|ref|ZP_08408921.1| putative peptidase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332037530|gb|EGI73983.1| putative peptidase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 672

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 100/274 (36%), Gaps = 58/274 (21%)

Query: 222 NQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           + + V +            +  ++ +D +  +  + + +   M  +P  S +G+R     
Sbjct: 43  DGKTVYFVRNRMDIKTDRKVGNIWSVDYKTKQM-QPLTSGVHMDYSPVLSPDGQRLAFIS 101

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----------------- 319
            +D +  IY   L++ A  +++N      S ++SPDS+Q++F                  
Sbjct: 102 TRDGSSQIYIKWLKTGAMAKISNLTSSPRSITWSPDSNQLIFSMFVPSANSAPVSLPGKP 161

Query: 320 ------------------SDREGK-----EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                             SD  G       QL+ + +NG + K+++ D+  +  D  +S 
Sbjct: 162 KGATWAEPAKFIDDVYYRSDGGGYTQKGFSQLFSIDANGGNAKQLTHDEFDNAGDVSFSN 221

Query: 357 QGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR 408
            G  + F+    +          I  +         +   D   + P  SP GR L ++ 
Sbjct: 222 DGKSLYFSTNRHKNNQLKFTNNEIYKLDLASQTITEITNRDGPDEQPKVSPDGRYLAYTG 281

Query: 409 KKDGDT---GSKLYSIDLNGRNETLINTPAYASD 439
             D  T    ++LY  DL   N T + TP +   
Sbjct: 282 YDDKRTNYENAQLYIRDLKTGNTTSL-TPNFDRS 314



 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 47/336 (13%), Positives = 110/336 (32%), Gaps = 64/336 (19%)

Query: 164 QSITGEKGDFNSRILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           +         + + ++   +     +     ++  +D     ++ LT S   + + P  S
Sbjct: 33  EYANQIDITEDGKTVYFVRNRMDIKTDRKVGNIWSVDYKTKQMQPLT-SGVHMDYSPVLS 91

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV---- 276
           P+ Q++A+ +  D    ++Y+   +     K I N  S   +  +S +  + + S+    
Sbjct: 92  PDGQRLAFISTRDGSS-QIYIKWLKTGAMAK-ISNLTSSPRSITWSPDSNQLIFSMFVPS 149

Query: 277 ------------------------------------QKDEAMDIYSVDLQSNATERLTNT 300
                                                +     ++S+D      ++LT+ 
Sbjct: 150 ANSAPVSLPGKPKGATWAEPAKFIDDVYYRSDGGGYTQKGFSQLFSIDANGGNAKQLTHD 209

Query: 301 LFINIS-ASYSPDSSQIVFESDREGKEQ-------LYVMQSNGSDQKRISQDKEASYFDP 352
            F N    S+S D   + F ++R    Q       +Y +         I+ +++     P
Sbjct: 210 EFDNAGDVSFSNDGKSLYFSTNRHKNNQLKFTNNEIYKLDLASQTITEIT-NRDGPDEQP 268

Query: 353 VWSPQGDLIAFT-----KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
             SP G  +A+T     + + E   + +          L  + +       WS + + + 
Sbjct: 269 KVSPDGRYLAYTGYDDKRTNYENAQLYIRDLKTGNTTSLTPNFDRSVGQIKWSANSKGVY 328

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           FS    G T   L     +G+ + +       +  +
Sbjct: 329 FSYADKGQTA--LAYQPRSGKRKIITTQIGSVAFGR 362



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 28/208 (13%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------- 283
           Y  +   +++ +D     A +   +         FS++GK    S  + +          
Sbjct: 185 YTQKGFSQLFSIDANGGNAKQLTHDEFDNAGDVSFSNDGKSLYFSTNRHKNNQLKFTNNE 244

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQSNGSDQ 338
           IY +DL S     +TN    +     SPD   + +    + +      QLY+      + 
Sbjct: 245 IYKLDLASQTITEITNRDGPDEQPKVSPDGRYLAYTGYDDKRTNYENAQLYIRDLKTGNT 304

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             ++ + + S     WS     + F+     + A+    + G ++ +  +          
Sbjct: 305 TSLTPNFDRSVGQIKWSANSKGVYFSYADKGQTALAYQPRSGKRKIITTQIG-------- 356

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               S+ F R   G      + +  +G 
Sbjct: 357 ----SVAFGRPYSGGD----FDVSEDGE 376



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 89/240 (37%), Gaps = 23/240 (9%)

Query: 168 GEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
            E   F   + + S+    +    + L  +D +G N + LT        +  FS + + +
Sbjct: 167 AEPAKFIDDVYYRSDGGGYTQKGFSQLFSIDANGGNAKQLTHDEFDNAGDVSFSNDGKSL 226

Query: 227 AYATYDDEDIL------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD- 279
            ++T   ++         +Y +D       + I N       P+ S +G+    +   D 
Sbjct: 227 YFSTNRHKNNQLKFTNNEIYKLDLASQTITE-ITNRDGPDEQPKVSPDGRYLAYTGYDDK 285

Query: 280 ----EAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSN 334
               E   +Y  DL++  T  LT     ++    +S +S  + F    +G+  L     +
Sbjct: 286 RTNYENAQLYIRDLKTGNTTSLTPNFDRSVGQIKWSANSKGVYFSYADKGQTALAYQPRS 345

Query: 335 G------SDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLV 387
           G      +    ++  +  S  D   S  G+ +AFT   +     I  +K+ G  +RL  
Sbjct: 346 GKRKIITTQIGSVAFGRPYSGGDFDVSEDGE-VAFTLADTQRPADIATIKR-GKAQRLTT 403


>gi|258622162|ref|ZP_05717188.1| Periplasmic protease [Vibrio mimicus VM573]
 gi|258585486|gb|EEW10209.1| Periplasmic protease [Vibrio mimicus VM573]
          Length = 1085

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 80/259 (30%), Gaps = 43/259 (16%)

Query: 206 LTPSRDQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           +    +     P +      SP+ +++A+             +          +      
Sbjct: 28  VDTQSEVAHAAPTWLRDIALSPDGKQIAFTYAGQ------IWLVPAQGGEAIALTESGIY 81

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP +S + +    +  +    D++ + +Q   + RLT     +   ++S D  Q+ F 
Sbjct: 82  SEAPVWSPDSQSLAFTTNRYGMGDVFILAIQGGESRRLTYHGAKDTPYAFSADGKQLYFS 141

Query: 320 SDREGKE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           S R G E             QLY +   G  ++ +      +  D   SP    I +T  
Sbjct: 142 SRRLGDEKANANVKQGGFTAQLYSVPVTGGREQLVL---PIAVSDLAISPTQADILYTNQ 198

Query: 367 ------------SGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD 413
                       S     I        +   +       + P WS  G S+ +  ++ G 
Sbjct: 199 PSDEQKWRKRAVSDATRDIWKWSPTTGKHSQITSFRGEDRNPVWSADGTSMYYLSEQAGS 258

Query: 414 TGSKLYSIDLNGRNETLIN 432
               ++  + +G     + 
Sbjct: 259 F--NVWQQNFDGSEPVQVT 275



 Score = 96.2 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 76/213 (35%), Gaps = 36/213 (16%)

Query: 262 APRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           AP +      S +GK+   +     A  I+ V  Q      LT +   + +  +SPDS  
Sbjct: 38  APTWLRDIALSPDGKQIAFTY----AGQIWLVPAQGGEAIALTESGIYSEAPVWSPDSQS 93

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-------- 367
           + F ++R G   ++++   G + +R++    A      +S  G  + F+           
Sbjct: 94  LAFTTNRYGMGDVFILAIQGGESRRLTYHG-AKDTPYAFSADGKQLYFSSRRLGDEKANA 152

Query: 368 -----GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------G 412
                G    +  +   G +E+ LV    +     SP+   ++++ +             
Sbjct: 153 NVKQGGFTAQLYSVPVTGGREQ-LVLPIAVSDLAISPTQADILYTNQPSDEQKWRKRAVS 211

Query: 413 DTGSKLYSID-LNGRNETLINTPAYASDPQWVG 444
           D    ++      G++  + +      +P W  
Sbjct: 212 DATRDIWKWSPTTGKHSQITSFRGEDRNPVWSA 244



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 78/203 (38%), Gaps = 27/203 (13%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S N     I  + D    +Y V L S  T+R+T+T     + ++S D  ++++ S+R G
Sbjct: 341 VSPNSPEVAIVARGD----VYVVSLLSGLTQRITDTPEAERNIAFSSDGFRLIYASERGG 396

Query: 325 KEQLYVMQSNGSDQKRISQ---------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              +Y    N   +   +            E     P++SP    IA+ +       +  
Sbjct: 397 SWDIYQSYVNDGGKSFSTSLDIVEEPVLTAEEDLIQPLYSPNNKRIAYRENRNT-LKVYD 455

Query: 376 MKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +++D     LL   +         +  WSP    L+   +   +   +L   D +     
Sbjct: 456 IEQD-KTFTLLDAQALYSYFDSDLSYQWSPDSEYLVTRDRAVFNGDIQLLKFDSSEAPLN 514

Query: 430 LINT------PAYASDPQWVGFM 446
           L N+      P ++SD QWV ++
Sbjct: 515 LSNSGFSEFAPQFSSDGQWVYWL 537



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 77/211 (36%), Gaps = 28/211 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN  +VA     D     VY++        +RI +         FSS+G R + + ++ 
Sbjct: 342 SPNSPEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERNIAFSSDGFRLIYASERG 395

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + DIY   +                  LT    + I   YSP++ +I +   RE +  L
Sbjct: 396 GSWDIYQSYVNDGGKSFSTSLDIVEEPVLTAEEDL-IQPLYSPNNKRIAY---RENRNTL 451

Query: 329 YVMQSNGSDQ-KRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + +     +     I ++K D S+ 
Sbjct: 452 KVYDIEQDKTFTLLDAQALYSYFDSDLSYQWSPDSEYLVTRDRAVFNGDIQLLKFDSSEA 511

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            L L      + AP +S  G+ + +     G
Sbjct: 512 PLNLSNSGFSEFAPQFSSDGQWVYWLTDAKG 542



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 98/334 (29%), Gaps = 82/334 (24%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDTRIDR 248
            + ++   G   R LT    +      FS + +++ +++    D      V         
Sbjct: 105 DVFILAIQGGESRRLTYHGAKDTPY-AFSADGKQLYFSSRRLGDEKANANVKQGGFTAQL 163

Query: 249 APKRIGNFRSMILAP------RFSSNGKRALISVQK------------DEAMDIYSVDLQ 290
               +   R  ++ P        S      L + Q             D   DI+     
Sbjct: 164 YSVPVTGGREQLVLPIAVSDLAISPTQADILYTNQPSDEQKWRKRAVSDATRDIWKWSPT 223

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE---- 346
           +    ++T+    + +  +S D + + + S++ G   ++    +GS+  +++  K+    
Sbjct: 224 TGKHSQITSFRGEDRNPVWSADGTSMYYLSEQAGSFNVWQQNFDGSEPVQVTHHKQLPVR 283

Query: 347 -----------ASYFDPVW--------------------SPQGDL----------IAFTK 365
                        +   +W                     P G            +  + 
Sbjct: 284 FLSTSLQGDLAYGFDGEIWQLKAGAKQPQKVPVSIRRSAMPDGRHSVNFNHEMTEMVVSP 343

Query: 366 FSGE-----KFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT----- 414
            S E     +  + V+       + + +    +    +S  G  LI++ ++ G       
Sbjct: 344 NSPEVAIVARGDVYVVSLLSGLTQRITDTPEAERNIAFSSDGFRLIYASERGGSWDIYQS 403

Query: 415 ----GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               G K +S  L+   E ++        P +  
Sbjct: 404 YVNDGGKSFSTSLDIVEEPVLTAEEDLIQPLYSP 437



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 51/127 (40%), Gaps = 14/127 (11%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             L +   +   Q  ++        D   SP G  IAFT        I ++   G +   
Sbjct: 21  PTLSLANVDT--QSEVAHAAPTWLRDIALSPDGKQIAFTYAG----QIWLVPAQGGEAIA 74

Query: 386 LVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-----NTP-AYAS 438
           L E     +AP WSP  +SL F+  + G     + +I   G +  L      +TP A+++
Sbjct: 75  LTESGIYSEAPVWSPDSQSLAFTTNRYGMGDVFILAIQG-GESRRLTYHGAKDTPYAFSA 133

Query: 439 DPQWVGF 445
           D + + F
Sbjct: 134 DGKQLYF 140



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 75/191 (39%), Gaps = 11/191 (5%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
           + ++   +P + R IA +         +   G ++    +V++   S      +      
Sbjct: 365 LTQRITDTPEAERNIAFSSDGFRLIYASERGGSWDIYQSYVNDGGKSFSTSLDI------ 418

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRS 258
              +     + ++ L +P +SPN +++AY    +   +  +    T      + + ++  
Sbjct: 419 ---VEEPVLTAEEDLIQPLYSPNNKRIAYRENRNTLKVYDIEQDKTFTLLDAQALYSYFD 475

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIV 317
             L+ ++S + +  +   +     DI  +   S+     L+N+ F   +  +S D   + 
Sbjct: 476 SDLSYQWSPDSEYLVTRDRAVFNGDIQLLKFDSSEAPLNLSNSGFSEFAPQFSSDGQWVY 535

Query: 318 FESDREGKEQL 328
           + +D +G  ++
Sbjct: 536 WLTDAKGLREI 546


>gi|330896135|gb|EGH28356.1| translocation protein TolB [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 121

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 51/124 (41%), Gaps = 6/124 (4%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQER 384
           Q+Y    NG   +R++     +  +P  S     +           F + V        +
Sbjct: 1   QIYKTNINGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDGFTNFKVAVQDLARGSVK 59

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWV 443
           +L + +  ++PT +P+G  +I++ ++ G     L  + +NGR    + T      +P W 
Sbjct: 60  ILTDSNLDESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRVRLPLPTAQGEVREPSWS 117

Query: 444 GFMD 447
            +++
Sbjct: 118 PYLN 121



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 5/120 (4%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKR 340
            IY  ++     ER+T     N +   S D   +V    ++G    ++ V        K 
Sbjct: 1   QIYKTNINGGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFTNFKVAVQDLARGSVKI 60

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
           ++         P  +P G ++ +      +  + ++  +G  +  L      ++ P+WSP
Sbjct: 61  LT--DSNLDESPTVAPNGTMVIYATRQQGRGVLMLVSINGRVRLPLPTAQGEVREPSWSP 118



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/120 (11%), Positives = 40/120 (33%), Gaps = 2/120 (1%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   + +G     +T   +     P+ S +++ +    +  +      +    + R   
Sbjct: 1   QIYKTNINGGGAERVTFVGN-YNANPKLSADEKTLV-MIHRQDGFTNFKVAVQDLARGSV 58

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +I    ++  +P  + NG   + + ++     +  V +       L          S+SP
Sbjct: 59  KILTDSNLDESPTVAPNGTMVIYATRQQGRGVLMLVSINGRVRLPLPTAQGEVREPSWSP 118


>gi|226227618|ref|YP_002761724.1| hypothetical protein GAU_2212 [Gemmatimonas aurantiaca T-27]
 gi|226090809|dbj|BAH39254.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 1121

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 67/174 (38%), Gaps = 15/174 (8%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI--NISASYSP 311
                  ++   +++G+        D    +Y +       E LT    +  N     SP
Sbjct: 62  TTTEGTWMSTDITADGQWIYF----DLLGHVYRMRATGGDAEVLTQNSGVALNYQPRVSP 117

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------ 365
           D   + F +DR G + L+VM ++GS+ + ++ D  ++  +P W+P G  I   +      
Sbjct: 118 DGKLVAFITDRRGMQNLWVMNADGSNPRAVATDNASNMAEPAWTPDGRFIIVRRSGGGNA 177

Query: 366 -FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              G    + +  +DG Q   LV       P+ S  G+ L +       T   L
Sbjct: 178 EGGGGAGGLYMYHRDGGQGVQLVTGGVW--PSVSKDGKFLYYHVNMSNVTTKDL 229



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 101/283 (35%), Gaps = 61/283 (21%)

Query: 218 RFSPNQQKVAYATYDD--------------EDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R++ + Q +                         +V+   + + R   RI +        
Sbjct: 338 RWAADGQSLVITQGGKIRRVAAATGAVTTIPFSAKVHRTISEMARKEFRISDGPVEAQFV 397

Query: 264 RF---SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--INISASYSPDSSQIVF 318
           R+   +++GK+ +          IY+ D  +   +RLT   F  +  + + SPD   + F
Sbjct: 398 RWPASTTDGKKIVFQA----LGHIYAQDGATGTPKRLTPDTFKPLEYAPAISPDGKWVAF 453

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------- 370
            + D   +  +Y +   G    ++++D    Y DPVW+P G  +      G         
Sbjct: 454 VTFDDAARGNMYKVAITGGAPVKLTRD-PGDYVDPVWTPDGAQVVVGLGEGATARGRTIT 512

Query: 371 ----FAIGVMKKDGSQERLLVEDS--------------NLQAPTWSPSGRSLIFSRKKDG 412
               + +      G+   + V  +               L  P++ P GR L +  ++  
Sbjct: 513 HNAWYDLVRFSAAGNDTGITVASAIKPTGAAQGNEARRQLLRPSFGPEGR-LFYPEQRAN 571

Query: 413 DTGS----KLYSIDLNGRNETL-INTPAY-----ASDPQWVGF 445
             G+     L S+ L+G ++   +  PA      + D QWV F
Sbjct: 572 RPGAPGGVALMSVKLDGSDKRTHLTFPAADEIVPSPDGQWVAF 614



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 95/294 (32%), Gaps = 55/294 (18%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPNQQ 224
            T  +G + S  +      +   +   +  M   G +   LT +    + ++PR SP+ +
Sbjct: 61  FTTTEGTWMSTDITADGQWIYFDLLGHVYRMRATGGDAEVLTQNSGVALNYQPRVSPDGK 120

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------- 277
            VA+ T D   +  +++M+           +  S +  P ++ +G+  ++          
Sbjct: 121 LVAFIT-DRRGMQNLWVMNADGSNPRAVATDNASNMAEPAWTPDGRFIIVRRSGGGNAEG 179

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE---------GKEQL 328
              A  +Y          +L       +  S S D   + +  +           G+ QL
Sbjct: 180 GGGAGGLYMYHRDGGQGVQLVTGG---VWPSVSKDGKFLYYHVNMSNVTTKDLTAGQLQL 236

Query: 329 YVMQSNGSDQKRISQDKE----------ASYFDPVWSPQGDLIAFTKF------------ 366
                   +   ++  +                P  SP G  +AF +             
Sbjct: 237 RRWSFETGEVVDVTSGENVGAAAGRFSSGGGAAPEISPDGRWLAFARHIPDGVLDFKGHK 296

Query: 367 SGEKFAIGVMKKDGSQERLLVED------------SNLQAPTWSPSGRSLIFSR 408
            G + A+ +       ER+L++               L    W+  G+SL+ ++
Sbjct: 297 YGPRSALWLRDLKTGTERMLMDPIEPVAISAGKVLGALPRYRWAADGQSLVITQ 350



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 92/334 (27%), Gaps = 93/334 (27%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY------ATYDDEDILRVYLMDTRI 246
           L VM+ DG+N R +       + EP ++P+ + +                  +Y+     
Sbjct: 134 LWVMNADGSNPRAVATDNASNMAEPAWTPDGRFIIVRRSGGGNAEGGGGAGGLYMYHRDG 193

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---------EAMDIYSVDLQSNATERL 297
            +  + +       + P  S +GK     V              + +     ++     +
Sbjct: 194 GQGVQLVTGG----VWPSVSKDGKFLYYHVNMSNVTTKDLTAGQLQLRRWSFETGEVVDV 249

Query: 298 TNT-----------LFINISASYSPDSSQIVFESD------------REGKEQLYVMQSN 334
           T+                 +   SPD   + F                  +  L++    
Sbjct: 250 TSGENVGAAAGRFSSGGGAAPEISPDGRWLAFARHIPDGVLDFKGHKYGPRSALWLRDLK 309

Query: 335 GSDQKRISQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              ++ +    E           +     W+  G  +  T   G K    V    G+   
Sbjct: 310 TGTERMLMDPIEPVAISAGKVLGALPRYRWAADGQSLVIT--QGGKIR-RVAAATGAVTT 366

Query: 385 L-----------------------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +                        VE   ++ P  +  G+ ++F           +Y+ 
Sbjct: 367 IPFSAKVHRTISEMARKEFRISDGPVEAQFVRWPASTTDGKKIVF------QALGHIYAQ 420

Query: 422 D-LNGRNETLINT--------PAYASDPQWVGFM 446
           D   G  + L           PA + D +WV F+
Sbjct: 421 DGATGTPKRLTPDTFKPLEYAPAISPDGKWVAFV 454



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 39/107 (36%), Gaps = 11/107 (10%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS---NLQAPTWSP 399
              E ++     +  G  I F         +  M+  G    +L ++S       P  SP
Sbjct: 62  TTTEGTWMSTDITADGQWIYFDLLG----HVYRMRATGGDAEVLTQNSGVALNYQPRVSP 117

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
            G+ + F   + G     L+ ++ +G N   + T   +  ++P W  
Sbjct: 118 DGKLVAFITDRRG--MQNLWVMNADGSNPRAVATDNASNMAEPAWTP 162



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 81/219 (36%), Gaps = 37/219 (16%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             G   R    +   + + P  SP+ + VA+ T+DD     +Y +      AP ++    
Sbjct: 423 ATGTPKRLTPDTFKPLEYAPAISPDGKWVAFVTFDDAARGNMYKVAI-TGGAPVKLTRDP 481

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSS 314
              + P ++ +G + ++ + +            +     +T+  + ++   SA+ +    
Sbjct: 482 GDYVDPVWTPDGAQVVVGLGEG----------ATARGRTITHNAWYDLVRFSAAGNDTGI 531

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-----E 369
            +       G  Q       G++ +R           P + P+G L    + +       
Sbjct: 532 TVASAIKPTGAAQ-------GNEARR-------QLLRPSFGPEGRLFYPEQRANRPGAPG 577

Query: 370 KFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIF 406
             A+  +K DGS +R  L    ++   P  SP G+ + F
Sbjct: 578 GVALMSVKLDGSDKRTHLTFPAADEIVP--SPDGQWVAF 614


>gi|261407399|ref|YP_003243640.1| hypothetical protein GYMC10_3597 [Paenibacillus sp. Y412MC10]
 gi|261283862|gb|ACX65833.1| hypothetical protein GYMC10_3597 [Paenibacillus sp. Y412MC10]
          Length = 457

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 54/293 (18%), Positives = 105/293 (35%), Gaps = 30/293 (10%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVM-DRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           T   G     I + S    S      + +   +DG + + LT         P +SP+++ 
Sbjct: 6   TVSHGIVPEWIAYTSNRGGS----FDIWLYRPQDGFDFQ-LTQGLGAEFSVPYWSPDRRS 60

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A+       I  V  +   +     RI       L   +S + +         +   I 
Sbjct: 61  IAFI-----GIGHVVHVLDTVSFTVARIDQIEPYTLL-DWSPDSRSLAYV----KNDRIV 110

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQD 344
             D  S+ +  +  T   +  A + P   +++F S D  G  QLY ++++G+++++I+  
Sbjct: 111 IYDTASHRSYSIPETGATD--AQWFPSGMELLFASPDSGGVTQLYRIRTDGTERRQITHL 168

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGR 402
            +    D   SP G    +T        I  +         L          P WSP  +
Sbjct: 169 TDGPLHDVRISPDGTFALYTSPGASISMISTVDLANGTIYALEGGPLAKNYFPVWSPDSK 228

Query: 403 SLIFSRK-KDGDTGSKLYSIDL-NGRNETLI------NTPA-YASDPQWVGFM 446
           S+ +S           L  ID   G+++  +       TP  ++ D   + ++
Sbjct: 229 SIAYSATAYSEPNYYSLIQIDSRTGQDQRTVAVSNCFATPVDWSPDGAQIAYL 281



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 82/225 (36%), Gaps = 11/225 (4%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            ++  D A+ R      +    + ++ P+  ++ +A+ D   + ++Y + T      +  
Sbjct: 108 RIVIYDTASHRS-YSIPETGATDAQWFPSGMELLFASPDSGGVTQLYRIRTDGTERRQIT 166

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPD 312
                 +   R S +G  AL +        I +VDL +     L       N    +SPD
Sbjct: 167 HLTDGPLHDVRISPDGTFALYTSPGASISMISTVDLANGTIYALEGGPLAKNYFPVWSPD 226

Query: 313 SSQIVFESDREGKEQLY---VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SG 368
           S  I + +    +   Y    + S     +R             WSP G  IA+    + 
Sbjct: 227 SKSIAYSATAYSEPNYYSLIQIDSRTGQDQRTVAVSNCFATPVDWSPDGAQIAYLSGCTA 286

Query: 369 EKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---IFSR 408
           E+F   + ++         +V    + A  WSP GR +   +F+ 
Sbjct: 287 EEFASQLWIVDIREQIPMHVVSGGRITALQWSPGGRKVPKSMFTS 331


>gi|148273953|ref|YP_001223514.1| hypothetical protein CMM_2769 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831883|emb|CAN02853.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 312

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/216 (21%), Positives = 85/216 (39%), Gaps = 29/216 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-----FSSNGKRALI 274
           SP+   V Y +  D  +  V L +       +RI   R   L  +      S +G    +
Sbjct: 92  SPDGAHV-YVSGRDGHLYDV-LWNDGAGGQGRRITADRDPALGFKNYLHGVSPDGSMLSV 149

Query: 275 S-----VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE----GK 325
                  + +   +I+ V +    T +LT+  F +  A +SPD   + F S+R     G 
Sbjct: 150 IGGQLDARGEWTTNIHLVPVDGGPTTQLTDDGFPDDGAEFSPDGGWLYFNSERGSDLPGH 209

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------KFAIGVMK 377
            QL+ M+++G+D  + + D+  ++F P  SP G+ I +  F              + V+ 
Sbjct: 210 AQLFTMRTDGTDTHQFTSDERVNWF-PHPSPDGEHIVYLSFPPGTLGHPADRDVILRVID 268

Query: 378 KDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRK 409
           +   + R L         +   +W+P  R   +   
Sbjct: 269 RQSHRTRDLASFPGGQGTINVTSWAPDSRRFAYVAY 304



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 87/247 (35%), Gaps = 43/247 (17%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--------- 279
            T  D  + R+ ++D           +    I AP ++ +G+  +++ +           
Sbjct: 1   MTLRDGQLARLLVVDVETGAERMVAESAVLHIEAPNWTPDGRWLVVNAEGGLWRLPAPDA 60

Query: 280 ---------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                     A+D  +VDL             IN     SPD +  V+ S R+G     +
Sbjct: 61  EEPDPDLPEPAVDFQAVDLGG--------VPPINNDHVMSPDGAH-VYVSGRDGHLYDVL 111

Query: 331 MQSN-GSDQKRISQDKEASYFDPVW----SPQGDLIAFT-----KFSGEKFAIGVMKKDG 380
                G   +RI+ D++ +     +    SP G +++               I ++  DG
Sbjct: 112 WNDGAGGQGRRITADRDPALGFKNYLHGVSPDGSMLSVIGGQLDARGEWTTNIHLVPVDG 171

Query: 381 SQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGD--TGSKLYSIDLNGRNETLINTPA-- 435
                L +D        +SP G  L F+ ++  D    ++L+++  +G +     +    
Sbjct: 172 GPTTQLTDDGFPDDGAEFSPDGGWLYFNSERGSDLPGHAQLFTMRTDGTDTHQFTSDERV 231

Query: 436 -YASDPQ 441
            +   P 
Sbjct: 232 NWFPHPS 238



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 40/117 (34%), Gaps = 10/117 (8%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-- 234
           + F SE          L  M  DG +    T S +++ + P  SP+ + + Y ++     
Sbjct: 196 LYFNSERGSDLPGHAQLFTMRTDGTDTHQFT-SDERVNWFPHPSPDGEHIVYLSFPPGTL 254

Query: 235 ----DILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRALISVQKDEAMDI 284
               D   +  +  R     + + +F           ++ + +R        EA  +
Sbjct: 255 GHPADRDVILRVIDRQSHRTRDLASFPGGQGTINVTSWAPDSRRFAYVAYPFEAPSL 311


>gi|262173178|ref|ZP_06040855.1| protease-related protein [Vibrio mimicus MB-451]
 gi|261890536|gb|EEY36523.1| protease-related protein [Vibrio mimicus MB-451]
          Length = 1085

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 80/259 (30%), Gaps = 43/259 (16%)

Query: 206 LTPSRDQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           +    +     P +      SP+ +++A+             +          +      
Sbjct: 28  VDTQSEVAHAAPTWLRDIALSPDGKQIAFTYAGQ------IWLVPAQGGEAIALTESGVY 81

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP +S + +    +  +    D++ + +Q   + RLT     +   ++S D  Q+ F 
Sbjct: 82  SEAPVWSPDSQSLAFTANRYGMGDVFILAVQGGESRRLTYHGAKDTPYAFSADGKQLYFS 141

Query: 320 SDREGKE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           S R G E             QLY +   G  ++ +      +  D   SP    I +T  
Sbjct: 142 SRRLGDEKANANVKQGGFTAQLYSVPVTGGREQLVL---PIAVSDLAISPTQADILYTNQ 198

Query: 367 ------------SGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD 413
                       S     I        +   +       + P WS  G S+ +  ++ G 
Sbjct: 199 PSDEQKWRKRAISDATRDIWKWSPTTGKHSQITSFRGEDRNPVWSADGTSMYYLSEQAGS 258

Query: 414 TGSKLYSIDLNGRNETLIN 432
               ++  + +G     + 
Sbjct: 259 F--NVWQQNFDGSEPVQVT 275



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 76/213 (35%), Gaps = 36/213 (16%)

Query: 262 APRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           AP +      S +GK+   +     A  I+ V  Q      LT +   + +  +SPDS  
Sbjct: 38  APTWLRDIALSPDGKQIAFTY----AGQIWLVPAQGGEAIALTESGVYSEAPVWSPDSQS 93

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-------- 367
           + F ++R G   ++++   G + +R++    A      +S  G  + F+           
Sbjct: 94  LAFTANRYGMGDVFILAVQGGESRRLTYHG-AKDTPYAFSADGKQLYFSSRRLGDEKANA 152

Query: 368 -----GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------G 412
                G    +  +   G +E+ LV    +     SP+   ++++ +             
Sbjct: 153 NVKQGGFTAQLYSVPVTGGREQ-LVLPIAVSDLAISPTQADILYTNQPSDEQKWRKRAIS 211

Query: 413 DTGSKLYSID-LNGRNETLINTPAYASDPQWVG 444
           D    ++      G++  + +      +P W  
Sbjct: 212 DATRDIWKWSPTTGKHSQITSFRGEDRNPVWSA 244



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 65/358 (18%), Positives = 123/358 (34%), Gaps = 55/358 (15%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDI------------YQSITGEKGDFNSRILFVSE 182
            +  I+     S    WRK A  ISD              +  IT  +G+  + +     
Sbjct: 189 TQADILYTNQPSDEQKWRKRA--ISDATRDIWKWSPTTGKHSQITSFRGEDRNPVWSADG 246

Query: 183 SV----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD----- 233
           +            ++   + DG+    +T  +   +     S     +AY    +     
Sbjct: 247 TSMYYLSEQAGSFNVWQQNFDGSEPVQVTHHKQLPVRFLSTSLQGD-LAYGFDGEIWQLK 305

Query: 234 ---EDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
              +   +V +   R      +   NF   ++    S N     I  + D    +Y V L
Sbjct: 306 AGAKQPQKVPVSIRRSAMPDGRHSVNFNHEMMEMVVSPNSPEVAIVARGD----VYVVSL 361

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------ 343
            S  T+R+T+T     + ++S D  ++++ S+R G   +Y    N   +   +       
Sbjct: 362 LSGLTQRITDTPEAERNIAFSSDGFRLIYASERGGSWDIYQSYVNDGGKSFSTSLDIVEE 421

Query: 344 ---DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------A 394
                E     P++SP    IA+ +       +  ++KD     LL   +         +
Sbjct: 422 PVLTAEEDLIQPLYSPNNKRIAYRENRNT-LKVYDIEKD-KTFTLLDAQALYSYFDSDLS 479

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDPQWVGFM 446
             WSP    L+   +   +   +L   D +     L N+      P ++SD QWV ++
Sbjct: 480 YQWSPDSEYLVTRDRAVFNGDIQLLKFDSSEAPLNLSNSGFSEFAPQFSSDGQWVYWL 537



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 98/334 (29%), Gaps = 82/334 (24%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDTRIDR 248
            + ++   G   R LT    +      FS + +++ +++    D      V         
Sbjct: 105 DVFILAVQGGESRRLTYHGAKDTPY-AFSADGKQLYFSSRRLGDEKANANVKQGGFTAQL 163

Query: 249 APKRIGNFRSMILAP------RFSSNGKRALISVQK------------DEAMDIYSVDLQ 290
               +   R  ++ P        S      L + Q             D   DI+     
Sbjct: 164 YSVPVTGGREQLVLPIAVSDLAISPTQADILYTNQPSDEQKWRKRAISDATRDIWKWSPT 223

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE---- 346
           +    ++T+    + +  +S D + + + S++ G   ++    +GS+  +++  K+    
Sbjct: 224 TGKHSQITSFRGEDRNPVWSADGTSMYYLSEQAGSFNVWQQNFDGSEPVQVTHHKQLPVR 283

Query: 347 -----------ASYFDPVW--------------------SPQGDL----------IAFTK 365
                        +   +W                     P G            +  + 
Sbjct: 284 FLSTSLQGDLAYGFDGEIWQLKAGAKQPQKVPVSIRRSAMPDGRHSVNFNHEMMEMVVSP 343

Query: 366 FSGE-----KFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT----- 414
            S E     +  + V+       + + +    +    +S  G  LI++ ++ G       
Sbjct: 344 NSPEVAIVARGDVYVVSLLSGLTQRITDTPEAERNIAFSSDGFRLIYASERGGSWDIYQS 403

Query: 415 ----GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               G K +S  L+   E ++        P +  
Sbjct: 404 YVNDGGKSFSTSLDIVEEPVLTAEEDLIQPLYSP 437



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 77/211 (36%), Gaps = 28/211 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN  +VA     D     VY++        +RI +         FSS+G R + + ++ 
Sbjct: 342 SPNSPEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERNIAFSSDGFRLIYASERG 395

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + DIY   +                  LT    + I   YSP++ +I +   RE +  L
Sbjct: 396 GSWDIYQSYVNDGGKSFSTSLDIVEEPVLTAEEDL-IQPLYSPNNKRIAY---RENRNTL 451

Query: 329 YVMQSNGSDQ-KRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + +     +     I ++K D S+ 
Sbjct: 452 KVYDIEKDKTFTLLDAQALYSYFDSDLSYQWSPDSEYLVTRDRAVFNGDIQLLKFDSSEA 511

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            L L      + AP +S  G+ + +     G
Sbjct: 512 PLNLSNSGFSEFAPQFSSDGQWVYWLTDAKG 542



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 18/118 (15%)

Query: 341 ISQDKEASYFDPVW------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQ 393
           +    E ++  P W      SP G  IAFT        I ++   G +   L E     +
Sbjct: 28  VDTQSEVAHAAPTWLRDIALSPDGKQIAFTYAG----QIWLVPAQGGEAIALTESGVYSE 83

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-----NTP-AYASDPQWVGF 445
           AP WSP  +SL F+  + G     + ++   G +  L      +TP A+++D + + F
Sbjct: 84  APVWSPDSQSLAFTANRYGMGDVFILAVQG-GESRRLTYHGAKDTPYAFSADGKQLYF 140



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 75/191 (39%), Gaps = 11/191 (5%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
           + ++   +P + R IA +         +   G ++    +V++   S      +      
Sbjct: 365 LTQRITDTPEAERNIAFSSDGFRLIYASERGGSWDIYQSYVNDGGKSFSTSLDI------ 418

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRS 258
              +     + ++ L +P +SPN +++AY    +   +  +    T      + + ++  
Sbjct: 419 ---VEEPVLTAEEDLIQPLYSPNNKRIAYRENRNTLKVYDIEKDKTFTLLDAQALYSYFD 475

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIV 317
             L+ ++S + +  +   +     DI  +   S+     L+N+ F   +  +S D   + 
Sbjct: 476 SDLSYQWSPDSEYLVTRDRAVFNGDIQLLKFDSSEAPLNLSNSGFSEFAPQFSSDGQWVY 535

Query: 318 FESDREGKEQL 328
           + +D +G  ++
Sbjct: 536 WLTDAKGLREI 546


>gi|298243201|ref|ZP_06967008.1| peptidase S41 [Ktedonobacter racemifer DSM 44963]
 gi|297556255|gb|EFH90119.1| peptidase S41 [Ktedonobacter racemifer DSM 44963]
          Length = 1093

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 73/188 (38%), Gaps = 19/188 (10%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            + +   + D    ++ V  +    ER T  +       +SPD   + F    EG  ++Y
Sbjct: 15  DQIVFVTEDD----LWVVRDEGGRAERWTAGVGEVSHPRFSPDGKFLAFVGREEGPSEVY 70

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFA-IGVMKKDGSQERL 385
           VM + G   +R++    A+     WSP G  I +   +G+   +F  I  +  +G   R 
Sbjct: 71  VMSATGEPARRLTFQG-ATCRVLGWSPDGHEILYASNAGQFTPRFQTIFAISPEGGLPRA 129

Query: 386 LVEDSNLQAPTWSPSGRSL---------IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           L       A ++   G  +          + R + G  G     ++ NG  + L+     
Sbjct: 130 LSY-GMANAISYGSQGGVVLGRNIREPAYWKRYRGGTVGHLWCDVEGNGTFQRLLALDGN 188

Query: 437 ASDPQWVG 444
            +DP WVG
Sbjct: 189 LADPCWVG 196



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 90/274 (32%), Gaps = 34/274 (12%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F  +I+FV+E          L V+  +G      T    ++   PRFSP+ + +A+   
Sbjct: 12  IFQDQIVFVTED--------DLWVVRDEGGRAERWTAGVGEV-SHPRFSPDGKFLAFVG- 61

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM----DIYSV 287
            +E    VY+M +      +R+    +      +S +G   L +    +       I+++
Sbjct: 62  REEGPSEVYVM-SATGEPARRLTFQGATCRVLGWSPDGHEILYASNAGQFTPRFQTIFAI 120

Query: 288 DLQSNATERLTNTLFINISASYSPDS--------SQIVFE-SDREGKEQLYVMQSNGSDQ 338
             +      L+  +   IS  Y             +  +    R G          G+  
Sbjct: 121 SPEGGLPRALSYGMANAIS--YGSQGGVVLGRNIREPAYWKRYRGGTVGHLWCDVEGNGT 178

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            +     + +  DP W   G+ I F         I      G   +      +  A + +
Sbjct: 179 FQRLLALDGNLADPCWV--GERIYFLSDHEGVGNIYSCTPAGEDLQRHTTHHDFYARSLA 236

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             G+ L++        G+ LY  D        ++
Sbjct: 237 SDGQRLVY------HAGADLYLFDPQTEETRQVS 264



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 125/348 (35%), Gaps = 52/348 (14%)

Query: 135 DRKQIIGKKFFSSPASWRK-----IAHTISDD----IYQSITGEKGDFNS------RILF 179
               ++G+     PA W++     + H   D      +Q +    G+         RI F
Sbjct: 143 QGGVVLGRNIR-EPAYWKRYRGGTVGHLWCDVEGNGTFQRLLALDGNLADPCWVGERIYF 201

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--------- 230
           +S+    G     +      G +++  T   D        + + Q++ Y           
Sbjct: 202 LSDHEGVGN----IYSCTPAGEDLQRHTTHHDFYAR--SLASDGQRLVYHAGADLYLFDP 255

Query: 231 -YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-D 288
             ++   + V +   R  R  K       +         G  A  + +       +++ +
Sbjct: 256 QTEETRQVSVQMPSMRTQRNRKFATASHYLDTY-ALHPQGYAAAFTTRG----KAFTMGN 310

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEA 347
            + +  +   +         +  D  +++  SD  G+E+L +    + S+ + +++ +  
Sbjct: 311 WEGSVLQHGESDGVRYRFLEWLNDGQRLIAISDATGEERLVIFNPEDASEPRVLAEAEFG 370

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
              +   SP  D++A T        + V+  +    R+L  +  + +   +WSP G+ L 
Sbjct: 371 RVVNLAVSPTDDVVAITNHRQ---ELLVVDLEIGSLRVLDRNEYARIAGISWSPDGKWLA 427

Query: 406 FSRKKDGD-TGSKLYSIDLNGRNETLIN------TPAYASDPQWVGFM 446
           +     G  T  KL  ++ +G    + +      +PA+  + +++ F+
Sbjct: 428 YGFAISGQKTAIKLCELE-SGATHQVTDPILEDVSPAFDPEGKFLYFI 474



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 59/151 (39%), Gaps = 7/151 (4%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDR 322
           + ++G+R +          +   + +  +  R+         ++ + SP    +   + R
Sbjct: 331 WLNDGQRLIAISDATGEERLVIFNPEDASEPRVLAEAEFGRVVNLAVSPTDDVVAITNHR 390

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGS 381
              ++L V+       + + +++ A      WSP G  +A+    SG+K AI + + +  
Sbjct: 391 ---QELLVVDLEIGSLRVLDRNEYARIAGISWSPDGKWLAYGFAISGQKTAIKLCELESG 447

Query: 382 QERLLVEDSNLQ-APTWSPSGRSLIFSRKKD 411
               + +      +P + P G+ L F   + 
Sbjct: 448 ATHQVTDPILEDVSPAFDPEGKFLYFIGARH 478



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 63/189 (33%), Gaps = 11/189 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-D 199
           GK F         + H  SD +         D    I     +      +  L + +  D
Sbjct: 303 GKAFTMGNWEGSVLQHGESDGVRYRFLEWLNDGQRLIAISDATG-----EERLVIFNPED 357

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            +  R L  +    +     SP    VA   +  E    + ++D  I        N  + 
Sbjct: 358 ASEPRVLAEAEFGRVVNLAVSPTDDVVAITNHRQE----LLVVDLEIGSLRVLDRNEYAR 413

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVF 318
           I    +S +GK                + +L+S AT ++T+ +  ++S ++ P+   + F
Sbjct: 414 IAGISWSPDGKWLAYGFAISGQKTAIKLCELESGATHQVTDPILEDVSPAFDPEGKFLYF 473

Query: 319 ESDREGKEQ 327
              R    Q
Sbjct: 474 IGARHFTPQ 482


>gi|258624228|ref|ZP_05719177.1| Periplasmic protease [Vibrio mimicus VM603]
 gi|258583379|gb|EEW08179.1| Periplasmic protease [Vibrio mimicus VM603]
          Length = 1085

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 80/259 (30%), Gaps = 43/259 (16%)

Query: 206 LTPSRDQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           +    +     P +      SP+ +++A+             +          +      
Sbjct: 28  VDTQSEVAHAAPTWLRDIALSPDGKQIAFTYAGQ------IWLVPAQGGEAIALTESGVY 81

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             AP +S + +    +  +    D++ + +Q   + RLT     +   ++S D  Q+ F 
Sbjct: 82  SEAPVWSPDSQSLAFTANRYGMGDVFILAVQGGESRRLTYHGAKDTPYAFSADGKQLYFS 141

Query: 320 SDREGKE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           S R G E             QLY +   G  ++ +      +  D   SP    I +T  
Sbjct: 142 SRRLGDEKANANVKQGGFTAQLYSVPVTGGREQLVL---PIAVSDLAISPTQADILYTNQ 198

Query: 367 ------------SGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD 413
                       S     I        +   +       + P WS  G S+ +  ++ G 
Sbjct: 199 PSDEQKWRKRAVSDATRDIWKWSPTTGKHSQITSFRGEDRNPVWSADGTSMYYLSEQAGS 258

Query: 414 TGSKLYSIDLNGRNETLIN 432
               ++  + +G     + 
Sbjct: 259 F--NVWQQNFDGSEPVQVT 275



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 76/213 (35%), Gaps = 36/213 (16%)

Query: 262 APRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           AP +      S +GK+   +     A  I+ V  Q      LT +   + +  +SPDS  
Sbjct: 38  APTWLRDIALSPDGKQIAFTY----AGQIWLVPAQGGEAIALTESGVYSEAPVWSPDSQS 93

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-------- 367
           + F ++R G   ++++   G + +R++    A      +S  G  + F+           
Sbjct: 94  LAFTANRYGMGDVFILAVQGGESRRLTYHG-AKDTPYAFSADGKQLYFSSRRLGDEKANA 152

Query: 368 -----GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------G 412
                G    +  +   G +E+ LV    +     SP+   ++++ +             
Sbjct: 153 NVKQGGFTAQLYSVPVTGGREQ-LVLPIAVSDLAISPTQADILYTNQPSDEQKWRKRAVS 211

Query: 413 DTGSKLYSID-LNGRNETLINTPAYASDPQWVG 444
           D    ++      G++  + +      +P W  
Sbjct: 212 DATRDIWKWSPTTGKHSQITSFRGEDRNPVWSA 244



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 78/203 (38%), Gaps = 27/203 (13%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S N     I  + D    +Y V L S  T+R+T+T     + ++S D  ++++ S+R G
Sbjct: 341 VSPNSPEVAIVARGD----VYVVSLLSGLTQRITDTPEAERNIAFSSDGFRLIYASERGG 396

Query: 325 KEQLYVMQSNGSDQKRISQ---------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              +Y    N   +   +            E     P++SP    IA+ +       +  
Sbjct: 397 SWDIYQSYVNDGGKSFSTSLDIVEEPVLTAEEDLIQPLYSPNNKRIAYRENRNT-LKVYD 455

Query: 376 MKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +++D     LL   +         +  WSP    L+   +   +   +L   D +     
Sbjct: 456 IEQD-KTFTLLDAQALYSYFDSDLSYQWSPDSEYLVTRDRAVFNGDIQLLKFDSSEAPLN 514

Query: 430 LINT------PAYASDPQWVGFM 446
           L N+      P ++SD QWV ++
Sbjct: 515 LSNSGFSEFAPQFSSDGQWVYWL 537



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 98/334 (29%), Gaps = 82/334 (24%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDTRIDR 248
            + ++   G   R LT    +      FS + +++ +++    D      V         
Sbjct: 105 DVFILAVQGGESRRLTYHGAKDTPY-AFSADGKQLYFSSRRLGDEKANANVKQGGFTAQL 163

Query: 249 APKRIGNFRSMILAP------RFSSNGKRALISVQK------------DEAMDIYSVDLQ 290
               +   R  ++ P        S      L + Q             D   DI+     
Sbjct: 164 YSVPVTGGREQLVLPIAVSDLAISPTQADILYTNQPSDEQKWRKRAVSDATRDIWKWSPT 223

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE---- 346
           +    ++T+    + +  +S D + + + S++ G   ++    +GS+  +++  K+    
Sbjct: 224 TGKHSQITSFRGEDRNPVWSADGTSMYYLSEQAGSFNVWQQNFDGSEPVQVTHHKQLPVR 283

Query: 347 -----------ASYFDPVW--------------------SPQGDL----------IAFTK 365
                        +   +W                     P G            +  + 
Sbjct: 284 FLSTSLQGDLAYGFDGEIWQLKAGAKQPQKVPVSIRRSAMPDGRHSVNFNHEMTEMVVSP 343

Query: 366 FSGE-----KFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT----- 414
            S E     +  + V+       + + +    +    +S  G  LI++ ++ G       
Sbjct: 344 NSPEVAIVARGDVYVVSLLSGLTQRITDTPEAERNIAFSSDGFRLIYASERGGSWDIYQS 403

Query: 415 ----GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               G K +S  L+   E ++        P +  
Sbjct: 404 YVNDGGKSFSTSLDIVEEPVLTAEEDLIQPLYSP 437



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/211 (22%), Positives = 77/211 (36%), Gaps = 28/211 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN  +VA     D     VY++        +RI +         FSS+G R + + ++ 
Sbjct: 342 SPNSPEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERNIAFSSDGFRLIYASERG 395

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + DIY   +                  LT    + I   YSP++ +I +   RE +  L
Sbjct: 396 GSWDIYQSYVNDGGKSFSTSLDIVEEPVLTAEEDL-IQPLYSPNNKRIAY---RENRNTL 451

Query: 329 YVMQSNGSDQ-KRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V           +      SYFD      WSP  + +     +     I ++K D S+ 
Sbjct: 452 KVYDIEQDKTFTLLDAQALYSYFDSDLSYQWSPDSEYLVTRDRAVFNGDIQLLKFDSSEA 511

Query: 384 RL-LVEDSNLQ-APTWSPSGRSLIFSRKKDG 412
            L L      + AP +S  G+ + +     G
Sbjct: 512 PLNLSNSGFSEFAPQFSSDGQWVYWLTDAKG 542



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 18/118 (15%)

Query: 341 ISQDKEASYFDPVW------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQ 393
           +    E ++  P W      SP G  IAFT        I ++   G +   L E     +
Sbjct: 28  VDTQSEVAHAAPTWLRDIALSPDGKQIAFTYAG----QIWLVPAQGGEAIALTESGVYSE 83

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-----NTP-AYASDPQWVGF 445
           AP WSP  +SL F+  + G     + ++   G +  L      +TP A+++D + + F
Sbjct: 84  APVWSPDSQSLAFTANRYGMGDVFILAVQG-GESRRLTYHGAKDTPYAFSADGKQLYF 140



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 75/191 (39%), Gaps = 11/191 (5%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
           + ++   +P + R IA +         +   G ++    +V++   S      +      
Sbjct: 365 LTQRITDTPEAERNIAFSSDGFRLIYASERGGSWDIYQSYVNDGGKSFSTSLDI------ 418

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRS 258
              +     + ++ L +P +SPN +++AY    +   +  +    T      + + ++  
Sbjct: 419 ---VEEPVLTAEEDLIQPLYSPNNKRIAYRENRNTLKVYDIEQDKTFTLLDAQALYSYFD 475

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIV 317
             L+ ++S + +  +   +     DI  +   S+     L+N+ F   +  +S D   + 
Sbjct: 476 SDLSYQWSPDSEYLVTRDRAVFNGDIQLLKFDSSEAPLNLSNSGFSEFAPQFSSDGQWVY 535

Query: 318 FESDREGKEQL 328
           + +D +G  ++
Sbjct: 536 WLTDAKGLREI 546


>gi|288918628|ref|ZP_06412977.1| serine/threonine protein kinase [Frankia sp. EUN1f]
 gi|288350028|gb|EFC84256.1| serine/threonine protein kinase [Frankia sp. EUN1f]
          Length = 725

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 15/205 (7%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           TI+DD   S++ + G F   ++  S +   G+    L V   DG+ +  L  +  Q   +
Sbjct: 528 TIADDARPSLSPD-GKF---VVVRSTTNDQGLPDAGLYVARLDGSKVFRL--NTAQQATD 581

Query: 217 PRFSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           P +SP+ +++AY   + E      V ++ T             +    P FS +G+R   
Sbjct: 582 PAWSPSGERIAYWASESESDRGFIVTILATSTSTPTPLTKGQGNRDADPTFSQDGQRIAF 641

Query: 275 SVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQ 332
           S Q+ D  ++IY ++   +   R+T     +   +YSPD   +VF  +R G   ++++  
Sbjct: 642 SRQETDGDLEIYQMNTDGSHVTRVTAEKGQDQDPAYSPDGKWLVFTGERGGAPRRIFLTD 701

Query: 333 SNGSDQ--KRISQDKEASYFDPVWS 355
              +    ++++ +     F   WS
Sbjct: 702 PADTTTPDRQLTTEPS---FHVRWS 723



 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 103/248 (41%), Gaps = 23/248 (9%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILA----PRFSS 267
             P  S +++ V +   + E    +Y +     + P ++   G   ++ +A    P  S 
Sbjct: 480 LLPSISRDRRTVVFFRKESETENALYAVAADGSKDPVKLFTSGLAANLTIADDARPSLSP 539

Query: 268 NGKRALISVQKDE----AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ES 320
           +GK  ++    ++       +Y   L  +   RL NT       ++SP   +I +   ES
Sbjct: 540 DGKFVVVRSTTNDQGLPDAGLYVARLDGSKVFRL-NTAQQATDPAWSPSGERIAYWASES 598

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKD 379
           + +    + ++ ++ S    +++ +     DP +S  G  IAF++  +     I  M  D
Sbjct: 599 ESDRGFIVTILATSTSTPTPLTKGQGNRDADPTFSQDGQRIAFSRQETDGDLEIYQMNTD 658

Query: 380 GSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI---DLNGRNETLINTPA 435
           GS   R+  E    Q P +SP G+ L+F+ ++ G    +++     D    +  L   P+
Sbjct: 659 GSHVTRVTAEKGQDQDPAYSPDGKWLVFTGERGGAP-RRIFLTDPADTTTPDRQLTTEPS 717

Query: 436 YASDPQWV 443
           +    +W 
Sbjct: 718 FHV--RWS 723



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 58/251 (23%), Positives = 109/251 (43%), Gaps = 30/251 (11%)

Query: 222 NQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + + + +AT +    D+    L D       K+I       L P  S + +  +   ++ 
Sbjct: 439 DTETMVFATKESGNYDLYTGRLPDQGPLTTVKKITTAPQDELLPSISRDRRTVVFFRKES 498

Query: 280 EAMD-IYSVDLQSNA--TERLTNTL------FINISASYSPDSSQIVFES--DREGKE-- 326
           E  + +Y+V    +    +  T+ L        +   S SPD   +V  S  + +G    
Sbjct: 499 ETENALYAVAADGSKDPVKLFTSGLAANLTIADDARPSLSPDGKFVVVRSTTNDQGLPDA 558

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---TKFSGEKFAIGVMKKDGSQE 383
            LYV + +GS   R++  ++A+  DP WSP G+ IA+      S   F + ++    S  
Sbjct: 559 GLYVARLDGSKVFRLNTAQQAT--DPAWSPSGERIAYWASESESDRGFIVTILATSTSTP 616

Query: 384 RLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TP 434
             L   + +    PT+S  G+ + FSR++  D   ++Y ++ +G + T +         P
Sbjct: 617 TPLTKGQGNRDADPTFSQDGQRIAFSRQET-DGDLEIYQMNTDGSHVTRVTAEKGQDQDP 675

Query: 435 AYASDPQWVGF 445
           AY+ D +W+ F
Sbjct: 676 AYSPDGKWLVF 686


>gi|255930285|ref|XP_002556702.1| Pc06g00930 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581315|emb|CAP79086.1| Pc06g00930 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 673

 Score =  105 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 61/325 (18%), Positives = 109/325 (33%), Gaps = 60/325 (18%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             K   + + +F    +  G   + L V + DG + R L  S     +   FSP+ + + 
Sbjct: 41  PRKAPSDKKGIFYMNRIAPGT--SELYVANVDGTDERPLL-SNPIYEYHATFSPDGEWIT 97

Query: 228 YATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-MDIY 285
           +    + D    +Y + T      + +    S+      S NG++       +    +I+
Sbjct: 98  FTGERNGDGNSDIYRVRTDGSDLEELVATS-SLEDGVVMSPNGRQIAYVSTANGFKANIW 156

Query: 286 SVDLQSNATERLTNTLFINIS---------ASYSPDSSQIVFESDREGKEQ--------- 327
            +DL+S     LT+T                S+SPD   I F SDR              
Sbjct: 157 VMDLESGKKWNLTDTATTAADDSLPNGYFRPSWSPDGQWIAFSSDRNSGWYGHGDPIFQG 216

Query: 328 -----------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------ 370
                      +Y ++ NGSD + +          P WS  G+ I F + + E       
Sbjct: 217 VTGWEHTQELSIYAIRPNGSDFRSVVSKPGYCLGSPKWSLDGERIVFYEMTRENTWNAHR 276

Query: 371 ---------FAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYS 420
                      + V    G+  R+  E + ++  P + P      F++      G + + 
Sbjct: 277 PESIDSANSTLVSVEFATGADRRVEAEGAGVKIFPQYIPDNTVAYFAK----GAGVEGFH 332

Query: 421 IDLNGRNETLINTPAYA-SDPQWVG 444
               G     +NT +     P W  
Sbjct: 333 TTAGGY----VNTSSEVIRSPAWSP 353



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 99/267 (37%), Gaps = 49/267 (18%)

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +  +++  P +SP+ +KV Y   +        ++Y  D+  +     +         P
Sbjct: 339 VNTSSEVIRSPAWSPDGKKVVYEKTSWTVRPMGKKLYSWDSEWEYRFTDV--------FP 390

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTLFINI-----------SASY 309
           + S N  +  ++ ++     I S +           +  + FI+            + S+
Sbjct: 391 QLS-NTNKMAMTEKQLGNSSIVSFNDNGTNEGLVYNVMESGFIDAKSVAMGTAGAFNPSW 449

Query: 310 SPDSSQ------IVFESDREGKEQLYVMQSNGSDQKRISQDKEA--------SYFDPVWS 355
           SPD +         F+    G   L    +NG+  + +++  E         +   P +S
Sbjct: 450 SPDGNWLTFGVGFWFQGRATGGGWLVRATANGTYSEVLTESNETLSSNSSVINSGFPSFS 509

Query: 356 PQGDLIAF-------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             G  I F       T     +  + ++  +  +  +L  + +   P++SP G+ ++F+R
Sbjct: 510 HDGKKIVFRIWGANSTLGDKSQLGLRLLDLETGKTSVLSTEWD-NLPSFSPDGKRIVFTR 568

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPA 435
           K   D    + ++  +G +  ++ +  
Sbjct: 569 KTS-DYNYDICTMRADGTDVRVLTSSG 594



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 85/224 (37%), Gaps = 40/224 (17%)

Query: 214 LFEPRFSPNQQKVAYA---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-------- 262
            F P +SP+   + +     +        +L+    +     +    +  L+        
Sbjct: 444 AFNPSWSPDGNWLTFGVGFWFQGRATGGGWLVRATANGTYSEVLTESNETLSSNSSVINS 503

Query: 263 --PRFSSNGKRALI-------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             P FS +GK+ +        ++     + +  +DL++  T  L+     +   S+SPD 
Sbjct: 504 GFPSFSHDGKKIVFRIWGANSTLGDKSQLGLRLLDLETGKTSVLSTE--WDNLPSFSPDG 561

Query: 314 SQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------- 365
            +IVF     +    +  M+++G+D + ++    A+    VW+  G  IAF+        
Sbjct: 562 KRIVFTRKTSDYNYDICTMRADGTDVRVLTSSG-ANDAHAVWTWDGR-IAFSSGMFGFQY 619

Query: 366 ---FSGEKFAIG----VMKKDGSQERLLVED-SNLQAPTWSPSG 401
                 + F       VM  DGS +R+L +       P + P+ 
Sbjct: 620 ECALYDDTFQPYGQVVVMNADGSNKRVLTDSIWEDSMPLYVPNS 663



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 23/160 (14%)

Query: 307 ASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +P   + +F  +R   G  +LYV   +G+D++ +  +    Y    +SP G+ I FT
Sbjct: 41  PRKAPSDKKGIFYMNRIAPGTSELYVANVDGTDERPLLSNPIYEYHA-TFSPDGEWITFT 99

Query: 365 --KFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +       I  ++ DGS    LV  S+L+     SP+GR + +    +G   + ++ +
Sbjct: 100 GERNGDGNSDIYRVRTDGSDLEELVATSSLEDGVVMSPNGRQIAYVSTANG-FKANIWVM 158

Query: 422 DL-NGRNETLINT---------------PAYASDPQWVGF 445
           DL +G+   L +T               P+++ D QW+ F
Sbjct: 159 DLESGKKWNLTDTATTAADDSLPNGYFRPSWSPDGQWIAF 198



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/122 (12%), Positives = 41/122 (33%), Gaps = 16/122 (13%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             +    P FSP+ +++ +     +    +  M        + + +  +      ++ +G
Sbjct: 548 STEWDNLPSFSPDGKRIVFTRKTSDYNYDICTMRAD-GTDVRVLTSSGANDAHAVWTWDG 606

Query: 270 KRALISVQK----------DEAMDIY----SVDLQSNATERLTNTLFINISASYSPDSSQ 315
            R   S             D+    Y     ++   +    LT++++ +    Y P+S+ 
Sbjct: 607 -RIAFSSGMFGFQYECALYDDTFQPYGQVVVMNADGSNKRVLTDSIWEDSMPLYVPNSAL 665

Query: 316 IV 317
             
Sbjct: 666 KA 667


>gi|320101738|ref|YP_004177329.1| WD40-like beta Propeller containing protein [Isosphaera pallida
           ATCC 43644]
 gi|319749020|gb|ADV60780.1| WD40-like beta Propeller containing protein [Isosphaera pallida
           ATCC 43644]
          Length = 729

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 91/261 (34%), Gaps = 73/261 (27%)

Query: 259 MILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           ++  P+ S  G R + +V+  +        D++ VD Q     +LT+    +    +SPD
Sbjct: 75  VVSDPQVSPQGDRIVYTVKVIDRETGRSNTDLWLVDRQGKTPRQLTSHPGSDRHPRWSPD 134

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA---------- 362
              + F SDR G  Q++++  + S + R           P+WSPQGD +A          
Sbjct: 135 GRSVAFLSDRSGSTQVWLLPMDQSGEARQLTRLPLDVEGPIWSPQGDRLAAMVSVLPGKS 194

Query: 363 ------------------------FTKF-----SGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                                     +       G +  + ++       R L+ D    
Sbjct: 195 FEETAETLRQRREAKSQAKIYDDLMVRHWDTWDDGTRQHVILIDVADGSARDLIPDWTAH 254

Query: 394 AP----------TWSPSGRSLIFSR----KKDGDTGSKLYSIDL----NGRNETLIN--- 432
           AP           +SP G  L F      +    T   ++ +      NGR+ T  N   
Sbjct: 255 APPFFSGSSTDYAFSPDGEELAFISEPLTEHPWTTNKDVWIVSTRPGENGRSATPRNLTA 314

Query: 433 -------TPAYASDPQWVGFM 446
                   P+Y+ D +++ F+
Sbjct: 315 GSLGAEAAPSYSPDGRFLAFL 335



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 85/278 (30%), Gaps = 66/278 (23%)

Query: 212 QILFEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           Q++ +P+ SP   ++ Y       +         +  R  + P+++ +       PR+S 
Sbjct: 74  QVVSDPQVSPQGDRIVYTVKVIDRETGRSNTDLWLVDRQGKTPRQLTSHPGSDRHPRWSP 133

Query: 268 NGKRALISVQKDEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIV--------- 317
           +G+       +  +  ++ + +  S    +LT          +SP   ++          
Sbjct: 134 DGRSVAFLSDRSGSTQVWLLPMDQSGEARQLTRLPLDVEGPIWSPQGDRLAAMVSVLPGK 193

Query: 318 -F-----------------------------ESDREGKEQLYVMQSNGSDQKRISQD--- 344
            F                               D   ++ + ++       + +  D   
Sbjct: 194 SFEETAETLRQRREAKSQAKIYDDLMVRHWDTWDDGTRQHVILIDVADGSARDLIPDWTA 253

Query: 345 -----KEASYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQ------ERLLV 387
                   S  D  +SP G+ +AF               + ++     +       R L 
Sbjct: 254 HAPPFFSGSSTDYAFSPDGEELAFISEPLTEHPWTTNKDVWIVSTRPGENGRSATPRNLT 313

Query: 388 ED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   AP++SP GR L F R++     +  + + L
Sbjct: 314 AGSLGAEAAPSYSPDGRFLAFLRQERAGFEADQWVLTL 351



 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 47/317 (14%), Positives = 100/317 (31%), Gaps = 73/317 (23%)

Query: 175 SRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            RI++  +     +G     L ++DR G   R LT S       PR+SP+ + VA+ + D
Sbjct: 86  DRIVYTVKVIDRETGRSNTDLWLVDRQGKTPRQLT-SHPGSDRHPRWSPDGRSVAFLS-D 143

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------------------ 274
                +V+L+        +++      +  P +S  G R                     
Sbjct: 144 RSGSTQVWLLPMDQSGEARQLTRLPLDVEGPIWSPQGDRLAAMVSVLPGKSFEETAETLR 203

Query: 275 ---------------------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS--- 310
                                +        +  +D+   +   L      +    +S   
Sbjct: 204 QRREAKSQAKIYDDLMVRHWDTWDDGTRQHVILIDVADGSARDLIPDWTAHAPPFFSGSS 263

Query: 311 ------PDSSQIVFESD------REGKEQLYVMQSNGSDQKR------ISQDKEASYFDP 352
                 PD  ++ F S+          + ++++ +   +  R      ++     +   P
Sbjct: 264 TDYAFSPDGEELAFISEPLTEHPWTTNKDVWIVSTRPGENGRSATPRNLTAGSLGAEAAP 323

Query: 353 VWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
            +SP G  +AF +     F      + +  +  S  R L    D  ++   W+   ++++
Sbjct: 324 SYSPDGRFLAFLRQERAGFEADQWVLTLFDRQTSGVRPLTLKLDRPIEEYAWTADSQAIV 383

Query: 406 FSRKKDGDTGSKLYSID 422
                D      L  +D
Sbjct: 384 --ATIDDRGSVALVRLD 398


>gi|261868863|gb|ACY02040.1| putative tricorn-like protease [Flammeovirga yaeyamensis]
          Length = 1080

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 62/311 (19%), Positives = 122/311 (39%), Gaps = 37/311 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNS----LCVMDRDGANIRYLTPSRDQIL-FEP 217
           +  I+  KG+  + + + ++S V+   +      +  M+ DG+N + +T  ++  + F  
Sbjct: 208 HTQISDFKGEDRTPVFYSNDSKVAYTSEVDGTLNVWTMNADGSNKKQITQLKNHPVRFLS 267

Query: 218 RFSPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFR--SMILAPRFSSNGKR 271
             S +     Y     T  + +  +   +    D     I   +  S       S NGK 
Sbjct: 268 AASNDLFCFGYDGEIYTLKEGEQPKKVEISINSDHKVNNISFQKKSSGGYGVSVSPNGKE 327

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
               ++ D    ++        T ++TNT     S S+SPD   +V+  +R+G   +Y  
Sbjct: 328 VAFILRGD----VFVTSTDYRTTVQITNTPEQERSVSFSPDGRSLVYAGERDGSWNIYQA 383

Query: 332 QSNGSD----------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           +    D          Q+ I   + A  F P WSP+GD IA+ +       + V+  +  
Sbjct: 384 KLGNEDELYFINATDIQEEIVTAEPAEEFQPKWSPKGDAIAYLEERTT---LKVINLETK 440

Query: 382 QERLLVEDSNLQAPT-------WSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +++++  +   + +       WSP G+ L   +S      T   L   D  G    L  
Sbjct: 441 AKKVILPGTFNYSYSDGDQAFDWSPDGKYLAVQYSPNLWTSTDIGLAQADGEGEIINLSQ 500

Query: 433 TPAYASDPQWV 443
           +   + +P++V
Sbjct: 501 SGYNSYNPRFV 511



 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 88/248 (35%), Gaps = 37/248 (14%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               L  P  SP+   +A+A   D     VY++ T      K I    +   +P ++ + 
Sbjct: 21  NPLWLRYPSISPDGTHIAFAYQGD-----VYVVPT-SGGEAKAITTHVAYDFSPVWAPDS 74

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------- 321
           K    +  +    D++   +     +RLT      I +S++PD   +++ +         
Sbjct: 75  KHIAFASDRHGNFDLFLTTVDGGHPQRLTYNSTSEIPSSFTPDGKHVLYTAQILDDVKSA 134

Query: 322 ---REGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAF------------TK 365
                   +LY +   G   ++ ++   E + ++   S     I +              
Sbjct: 135 QFPYGRLGELYSVSVGGDRPEQVLTITAEHAQYNADMS----KILYQDKKGYEDPWRKHH 190

Query: 366 FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            S     + V   +  +   + +     + P +  +   + ++ + DG     +++++ +
Sbjct: 191 TSAVTRDLWVYDVNTKKHTQISDFKGEDRTPVFYSNDSKVAYTSEVDGT--LNVWTMNAD 248

Query: 425 GRNETLIN 432
           G N+  I 
Sbjct: 249 GSNKKQIT 256



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 117/357 (32%), Gaps = 98/357 (27%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--- 230
           +  I F S+   +      L +   DG + + LT           F+P+ + V Y     
Sbjct: 74  SKHIAFASDRHGN----FDLFLTTVDGGHPQRLT-YNSTSEIPSSFTPDGKHVLYTAQIL 128

Query: 231 -------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--- 280
                  +    +  +Y +    DR  + +          +++++  + L   +K     
Sbjct: 129 DDVKSAQFPYGRLGELYSVSVGGDRPEQVLTITAEHA---QYNADMSKILYQDKKGYEDP 185

Query: 281 ---------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                      D++  D+ +    ++++    + +  +  + S++ + S+ +G   ++ M
Sbjct: 186 WRKHHTSAVTRDLWVYDVNTKKHTQISDFKGEDRTPVFYSNDSKVAYTSEVDGTLNVWTM 245

Query: 332 QSNGSDQKRISQDKEASY------------------------------------------ 349
            ++GS++K+I+Q K                                              
Sbjct: 246 NADGSNKKQITQLKNHPVRFLSAASNDLFCFGYDGEIYTLKEGEQPKKVEISINSDHKVN 305

Query: 350 -----------FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTW 397
                      +    SP G  +AF         + V   D      +      + + ++
Sbjct: 306 NISFQKKSSGGYGVSVSPNGKEVAFILRGD----VFVTSTDYRTTVQITNTPEQERSVSF 361

Query: 398 SPSGRSLIFSRKKDGDTGS---------KLYSIDLNGRNETLINT-PAYASDPQWVG 444
           SP GRSL+++ ++DG             +LY I+     E ++   PA    P+W  
Sbjct: 362 SPDGRSLVYAGERDGSWNIYQAKLGNEDELYFINATDIQEEIVTAEPAEEFQPKWSP 418



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 90/246 (36%), Gaps = 31/246 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K     ++ D          +    +    SPN ++VA+    D        + +   
Sbjct: 290 QPKKVEISINSDHKVNNISFQKKSSGGYGVSVSPNGKEVAFILRGD------VFVTSTDY 343

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS-----------VDLQSNATER 296
           R   +I N      +  FS +G+  + + ++D + +IY            ++      E 
Sbjct: 344 RTTVQITNTPEQERSVSFSPDGRSLVYAGERDGSWNIYQAKLGNEDELYFINATDIQEEI 403

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDPV 353
           +T          +SP    I +  +R     L V+      +K I   + +   S  D  
Sbjct: 404 VTAEPAEEFQPKWSPKGDAIAYLEERT---TLKVINLETKAKKVILPGTFNYSYSDGDQA 460

Query: 354 --WSPQGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIF 406
             WSP G  +A  ++S   +    IG+ + DG  E + +  S   +  P +   G++++F
Sbjct: 461 FDWSPDGKYLA-VQYSPNLWTSTDIGLAQADGEGEIINLSQSGYNSYNPRFVMDGKAIVF 519

Query: 407 SRKKDG 412
           +  + G
Sbjct: 520 ANDRYG 525



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 77/232 (33%), Gaps = 26/232 (11%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H +++  +Q    +        +  +   V+ I++  + V   D      +T + +Q   
Sbjct: 302 HKVNNISFQK---KSSGGYGVSVSPNGKEVAFILRGDVFVTSTDYRTTVQITNTPEQERS 358

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTR----------IDRAPKRIGNFRSMILAPRF 265
              FSP+ + + YA   D     +Y                D   + +    +    P++
Sbjct: 359 V-SFSPDGRSLVYAGERDGS-WNIYQAKLGNEDELYFINATDIQEEIVTAEPAEEFQPKW 416

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFI---NISASYSPDSSQIVFE 319
           S  G         +E   +  ++L++ A + +   T        + +  +SPD   +  +
Sbjct: 417 SPKGDAIAY---LEERTTLKVINLETKAKKVILPGTFNYSYSDGDQAFDWSPDGKYLAVQ 473

Query: 320 SDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                     + + Q++G  +         + ++P +   G  I F      
Sbjct: 474 YSPNLWTSTDIGLAQADGEGEIINLSQSGYNSYNPRFVMDGKAIVFANDRYG 525


>gi|156056358|ref|XP_001594103.1| hypothetical protein SS1G_05532 [Sclerotinia sclerotiorum 1980]
 gi|154703315|gb|EDO03054.1| hypothetical protein SS1G_05532 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1136

 Score =  104 bits (260), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 55/345 (15%), Positives = 112/345 (32%), Gaps = 40/345 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKK---------------FFSSPASWRKIAHTISDD 161
             K          RLWD    + +   +                  +  S  +        
Sbjct: 809  TKVASGSYDQTIRLWDAATGESLQTLEGHSNWVSSVAFSPDGTKVASGSDDRTIRLWDAA 868

Query: 162  IYQSITGEKG--DFNSRILFVSE--SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFE 216
              +S+   +G  D  S + F  +   V SG    ++ + D   G +++ L    D +   
Sbjct: 869  TGESLQTLEGHLDAVSSVAFSPDGTKVASGSDDRTIRLWDTATGESLQTLEGHSDGVTSV 928

Query: 217  PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              FSP+  KVA  +YD      +   D     + + +      + +  FS +G +   S 
Sbjct: 929  -AFSPDGTKVASGSYDQ----TIRFWDAVTGESLQTLEGHSHWVSSVAFSPDGTKVA-SG 982

Query: 277  QKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D  + ++  D  +    + L   L    S ++SPD +++   S   G   + +  +  
Sbjct: 983  SDDRTIRLW--DTATGESLQTLEGHLDAVYSVAFSPDGTKVASGS---GDWTIRLWDAAT 1037

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--Q 393
                +  +    + +   +SP G  +A   +      I +      +    +E       
Sbjct: 1038 GKSLQTLEGHSNAVYSVAFSPDGTKVASGSYDRT---IRLWDTVTGESLQTLEGHLDAVY 1094

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            +  +SP G  +       GD   +L+        +TL     +  
Sbjct: 1095 SVAFSPDGTKVA---SGSGDWTIRLWDAATGKSLQTLEGHSHWVR 1136



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 97/324 (29%), Gaps = 43/324 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
             K          RLWD    + +   +            H  SD +        G     
Sbjct: 767  TKVASGSDDRTIRLWDTATGESLQTLE-----------GH--SDGVTSVAFSPDG----- 808

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                   V SG    ++ + D                +    FSP+  KVA  + D    
Sbjct: 809  -----TKVASGSYDQTIRLWDAATGESLQTLEGHSNWVSSVAFSPDGTKVASGSDDR--- 860

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TE 295
              + L D     + + +      + +  FS +G +   S   D  + ++  D  +    +
Sbjct: 861  -TIRLWDAATGESLQTLEGHLDAVSSVAFSPDGTKVA-SGSDDRTIRLW--DTATGESLQ 916

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             L        S ++SPD +++   S     + +    +   +  +  +          +S
Sbjct: 917  TLEGHSDGVTSVAFSPDGTKVASGSY---DQTIRFWDAVTGESLQTLEGHSHWVSSVAFS 973

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGD 413
            P G  +A      +   I +      +    +E       +  +SP G  +       GD
Sbjct: 974  PDGTKVA---SGSDDRTIRLWDTATGESLQTLEGHLDAVYSVAFSPDGTKVA---SGSGD 1027

Query: 414  TGSKLYSIDLNGRNETLINTPAYA 437
               +L+     G++   +   + A
Sbjct: 1028 WTIRLWDA-ATGKSLQTLEGHSNA 1050



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 78/226 (34%), Gaps = 16/226 (7%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V SG    ++ + D                +    FSP+  KVA  + D      + L 
Sbjct: 726 KVASGSDDRTIRLWDAATGESLQTLEGHSNWVRSVAFSPDGTKVASGSDDR----TIRLW 781

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTL 301
           DT    + + +      + +  FS +G +   S   D+ + ++  D  +    + L    
Sbjct: 782 DTATGESLQTLEGHSDGVTSVAFSPDGTKVA-SGSYDQTIRLW--DAATGESLQTLEGHS 838

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++SPD +++   SD      + +  +   +  +  +    +     +SP G  +
Sbjct: 839 NWVSSVAFSPDGTKVASGSD---DRTIRLWDAATGESLQTLEGHLDAVSSVAFSPDGTKV 895

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
           A      +   I +      +    +E  +    +  +SP G  + 
Sbjct: 896 A---SGSDDRTIRLWDTATGESLQTLEGHSDGVTSVAFSPDGTKVA 938



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 77/230 (33%), Gaps = 25/230 (10%)

Query: 204 RYLTPSRDQILFEP--------RFSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRI 253
           R++  +R  I   P         F+P    +   +       I ++  + +    A + +
Sbjct: 649 RFVLYNRVGIEQAPLQIYCSALSFAPENSIIRKTFQKCIPSWIYKISRVRSNWSAALQTL 708

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPD 312
               + + +  FS +G +   S   D  + ++  D  +    + L        S ++SPD
Sbjct: 709 EGHSNWVRSVAFSPDGTKVA-SGSDDRTIRLW--DAATGESLQTLEGHSNWVRSVAFSPD 765

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +++   SD      + +  +   +  +  +          +SP G  +A   +      
Sbjct: 766 GTKVASGSD---DRTIRLWDTATGESLQTLEGHSDGVTSVAFSPDGTKVASGSYDQT--- 819

Query: 373 IGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYS 420
           I +      +    +E  +    +  +SP G  +        D   +L+ 
Sbjct: 820 IRLWDAATGESLQTLEGHSNWVSSVAFSPDGTKVASGSD---DRTIRLWD 866


>gi|119473577|ref|XP_001258664.1| wd-repeat protein [Neosartorya fischeri NRRL 181]
 gi|119406817|gb|EAW16767.1| wd-repeat protein [Neosartorya fischeri NRRL 181]
          Length = 1409

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 88/282 (31%), Gaps = 41/282 (14%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             RLWD         +      AS   +A +    I                       S 
Sbjct: 1090 IRLWDAATGS--TRQTLQGHTASVEAVAFSPDGQII---------------------ASA 1126

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                ++ + D     +R              FSPN Q +A A  D      + L D    
Sbjct: 1127 AKDGTIWLWDAATGAVRQTLQGHTDSAMAVAFSPNGQTIASAADDK----TIRLWDAASG 1182

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINIS 306
               + +      ++A  FS +G++   S   D+ + ++  D  + +  + L        +
Sbjct: 1183 SVGQPLQGHTDSVIAVAFSPDGQKIA-SAADDKTIRLW--DAATGSARQTLQGHTGWVTA 1239

Query: 307  ASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++SP+   I   S DR     + +  +     ++  Q   AS     +SP G  IA   
Sbjct: 1240 VAFSPEGQTIASASYDRT----IRLWDTATGSVRQTLQGHTASVEAVAFSPDGQTIASAA 1295

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
                   I +        R  ++       A  +S  G+++ 
Sbjct: 1296 DDKT---IWLWDAATGAVRKTLQGHTDSVTAVAFSSDGQTIA 1334



 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 94/264 (35%), Gaps = 23/264 (8%)

Query: 173  FNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            + + + F    +++VS     ++ + D    + R         +    FSP+ Q +A A 
Sbjct: 900  WVTAVAFSPGGQTIVSAAADETIRLWDAATGSARQTLQGHTGWVIAVAFSPDGQIIASAA 959

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             D      + L D     A + +    + + A  FS  G+    S   D  + ++  D  
Sbjct: 960  KDG----TIRLWDAATGTARQTLQGHITSVEAVAFSPGGQTIA-SAATDGTIWLW--DAA 1012

Query: 291  SNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            + A  + L        + ++SPD   I   +  +G  QL+   +     ++         
Sbjct: 1013 TGAVRQTLQGHTGWVTAVAFSPDGQIIA-SAATDGTIQLW--DTAMCSARQTLHGHMDWV 1069

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFS 407
                +SP G +IA     G    I +        R  +    ++++A  +SP G+ +  S
Sbjct: 1070 TAVAFSPDGQIIASAAKDGT---IRLWDAATGSTRQTLQGHTASVEAVAFSPDGQIIA-S 1125

Query: 408  RKKDGDTGSKLYSIDLNGRNETLI 431
              KDG     ++  D         
Sbjct: 1126 AAKDGT----IWLWDAATGAVRQT 1145



 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 81/227 (35%), Gaps = 16/227 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ S     ++ + D    ++          +    FSP+ QK+A A  D      + L
Sbjct: 1163 QTIASAADDKTIRLWDAASGSVGQPLQGHTDSVIAVAFSPDGQKIASAADDK----TIRL 1218

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D     A + +      + A  FS  G+    S   D  + ++  D  + +  +     
Sbjct: 1219 WDAATGSARQTLQGHTGWVTAVAFSPEGQTIA-SASYDRTIRLW--DTATGSVRQTLQGH 1275

Query: 302  FINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              ++ A ++SPD   I   +D    + +++  +     ++  Q    S     +S  G  
Sbjct: 1276 TASVEAVAFSPDGQTIASAAD---DKTIWLWDAATGAVRKTLQGHTDSVTAVAFSSDGQT 1332

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
            IA T        I +        R  ++       A  +SP G+++ 
Sbjct: 1333 IASTAVDKT---IWLWDAATGAVRKTLQGHTDSVTAVAFSPDGQTIA 1376



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 106/326 (32%), Gaps = 40/326 (12%)

Query: 128  FRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISDD---------------IYQSITGE 169
             RLWD       + + G        ++     TI+                 + Q++ G 
Sbjct: 964  IRLWDAATGTARQTLQGHITSVEAVAFSPGGQTIASAATDGTIWLWDAATGAVRQTLQGH 1023

Query: 170  KGDFNSRILFVSESVVSGIIKNSLCVMDRDGA--NIRYLTPSRDQILFEPRFSPNQQKVA 227
             G + + + F  +  +         +   D A  + R         +    FSP+ Q +A
Sbjct: 1024 TG-WVTAVAFSPDGQIIASAATDGTIQLWDTAMCSARQTLHGHMDWVTAVAFSPDGQIIA 1082

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A  D      + L D       + +    + + A  FS +G+    S  KD  + ++  
Sbjct: 1083 SAAKDG----TIRLWDAATGSTRQTLQGHTASVEAVAFSPDGQIIA-SAAKDGTIWLW-- 1135

Query: 288  DLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D  + A  +       +  A ++SP+   I   +D    + + +  +      +  Q   
Sbjct: 1136 DAATGAVRQTLQGHTDSAMAVAFSPNGQTIASAAD---DKTIRLWDAASGSVGQPLQGHT 1192

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
             S     +SP G  IA          I +        R  +      + A  +SP G+++
Sbjct: 1193 DSVIAVAFSPDGQKIASAADDKT---IRLWDAATGSARQTLQGHTGWVTAVAFSPEGQTI 1249

Query: 405  IFSRKKDGDTGSKLYSIDLNGRNETL 430
              +     D   +L+        +TL
Sbjct: 1250 ASASY---DRTIRLWDTATGSVRQTL 1272



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 77/229 (33%), Gaps = 19/229 (8%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             +       +    FSP  Q +  A  D+     + L D     A + +      ++A  
Sbjct: 892  QVLEGHTGWVTAVAFSPGGQTIVSAAADE----TIRLWDAATGSARQTLQGHTGWVIAVA 947

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
            FS +G+    S  KD  + ++  D  +    +       ++ A ++SP    I       
Sbjct: 948  FSPDGQIIA-SAAKDGTIRLW--DAATGTARQTLQGHITSVEAVAFSPGGQTIA---SAA 1001

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                +++  +     ++  Q          +SP G +IA     G    I +        
Sbjct: 1002 TDGTIWLWDAATGAVRQTLQGHTGWVTAVAFSPDGQIIASAATDGT---IQLWDTAMCSA 1058

Query: 384  RLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            R  +        A  +SP G+ +  S  KDG    +L+        +TL
Sbjct: 1059 RQTLHGHMDWVTAVAFSPDGQIIA-SAAKDGT--IRLWDAATGSTRQTL 1104



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 85/277 (30%), Gaps = 39/277 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ I    D   +  RLWD                       HT  D +        G  
Sbjct: 1162 GQTIASAADDKTI--RLWDAASGSV-----------GQPLQGHT--DSVIAVAFSPDG-- 1204

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    + + S     ++ + D    + R         +    FSP  Q +A A+YD 
Sbjct: 1205 --------QKIASAADDKTIRLWDAATGSARQTLQGHTGWVTAVAFSPEGQTIASASYDR 1256

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + L DT      + +    + + A  FS +G+    S   D+ + ++  D  + A
Sbjct: 1257 ----TIRLWDTATGSVRQTLQGHTASVEAVAFSPDGQTIA-SAADDKTIWLW--DAATGA 1309

Query: 294  TER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              + L        + ++S D   I   +     + +++  +     ++  Q    S    
Sbjct: 1310 VRKTLQGHTDSVTAVAFSSDGQTIASTAV---DKTIWLWDAATGAVRKTLQGHTDSVTAV 1366

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
             +SP G  IA          I +        R +   
Sbjct: 1367 AFSPDGQTIASAAADKT---IRLWDAATGSARQIYHS 1400



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 81/223 (36%), Gaps = 21/223 (9%)

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            Y     E I R Y+     D   + +      + A  FS  G+  + S   DE + ++  
Sbjct: 869  YWDERFEFIERAYVTQESWDPCMQVLEGHTGWVTAVAFSPGGQTIV-SAAADETIRLW-- 925

Query: 288  DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D  + +  + L       I+ ++SPD   I   + ++G  +L+   +     ++  Q   
Sbjct: 926  DAATGSARQTLQGHTGWVIAVAFSPDGQIIA-SAAKDGTIRLW--DAATGTARQTLQGHI 982

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
             S     +SP G  IA     G    I +        R  +      + A  +SP G+ +
Sbjct: 983  TSVEAVAFSPGGQTIASAATDGT---IWLWDAATGAVRQTLQGHTGWVTAVAFSPDGQII 1039

Query: 405  IFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQ 441
              +     D   +L+   +    +TL      +   A++ D Q
Sbjct: 1040 ASAAT---DGTIQLWDTAMCSARQTLHGHMDWVTAVAFSPDGQ 1079



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 30/187 (16%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        RLWD       + +      AS   +A   S D               
Sbjct: 1247 QTIASASYDRTIRLWDTATGS--VRQTLQGHTASVEAVA--FSPD--------------- 1287

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 +++ S     ++ + D     +R         +    FS + Q +A    D    
Sbjct: 1288 ----GQTIASAADDKTIWLWDAATGAVRKTLQGHTDSVTAVAFSSDGQTIASTAVDK--- 1340

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              ++L D       K +      + A  FS +G+    S   D+ + ++  D  + +  +
Sbjct: 1341 -TIWLWDAATGAVRKTLQGHTDSVTAVAFSPDGQTIA-SAAADKTIRLW--DAATGSARQ 1396

Query: 297  LTNTLFI 303
            + ++  I
Sbjct: 1397 IYHSDTI 1403


>gi|188994620|ref|YP_001928872.1| prolyl oligopeptidase [Porphyromonas gingivalis ATCC 33277]
 gi|188594300|dbj|BAG33275.1| prolyl oligopeptidase [Porphyromonas gingivalis ATCC 33277]
          Length = 684

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 90/293 (30%), Gaps = 69/293 (23%)

Query: 218 RFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+ +   YA            R            K+I +  S   AP + ++GKR  
Sbjct: 46  ALSPDGKTAVYAVSFPDVKTNKATRELFTVNLDGSGRKQITDTESNEYAPAWMADGKRIA 105

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------------ 321
               +  +M ++ ++       +L+N         +SPD  Q++F  D            
Sbjct: 106 FMSNEGGSMQLWVMNADGTERRQLSNIEGGITGFLFSPDEKQVLFTKDIKFGKRTKDIYP 165

Query: 322 ----REGK-----------------EQLYVMQSNGSDQKRISQDKEASYFDP-------- 352
                 G+                    ++  +       I+  K+    +P        
Sbjct: 166 DLDKATGRIITDLMYKHWDEWVETIPHPFIANATDG---MITTGKDIMEGEPYEAPMKPW 222

Query: 353 ------VWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVED--SNLQAPT 396
                  WSP G  IA+                 I +      +   + E        P 
Sbjct: 223 SGIEDFSWSPDGQNIAYASRKKTGMAYSLSTNSDIYIYNLTSGRTHNISEGMMGYDTYPK 282

Query: 397 WSPSGRSLIF-SRKKDGDTG--SKLYSIDL-NGRNETLINTPAYASDP-QWVG 444
           +SP G+S+ + S ++DG      +L+  DL  G+   +  T  Y  D  QW  
Sbjct: 283 FSPDGKSIAWISMERDGYESDLKRLFVADLATGKRTHVNPTFDYNVDMIQWAP 335



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 49/326 (15%), Positives = 104/326 (31%), Gaps = 66/326 (20%)

Query: 170 KGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             D  + +  VS   V +      L  ++ DG+  + +T +     + P +  + +++A+
Sbjct: 48  SPDGKTAVYAVSFPDVKTNKATRELFTVNLDGSGRKQITDTESN-EYAPAWMADGKRIAF 106

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--VQKDEAMDIYS 286
            + ++   +++++M+       +++ N    I    FS + K+ L +  ++  +      
Sbjct: 107 MS-NEGGSMQLWVMNAD-GTERRQLSNIEGGITGFLFSPDEKQVLFTKDIKFGKRTKDIY 164

Query: 287 VDLQSNATERLTN--------------TLFI---------------NISA---------- 307
            DL       +T+                FI                             
Sbjct: 165 PDLDKATGRIITDLMYKHWDEWVETIPHPFIANATDGMITTGKDIMEGEPYEAPMKPWSG 224

Query: 308 ----SYSPDSSQIVFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
               S+SPD   I + S +             +Y+          IS+        P +S
Sbjct: 225 IEDFSWSPDGQNIAYASRKKTGMAYSLSTNSDIYIYNLTSGRTHNISEGMMGYDTYPKFS 284

Query: 356 PQGDLIAFTKFSGEKFA-----IGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSR 408
           P G  IA+     + +      + V      +        D N+    W+P  + + F  
Sbjct: 285 PDGKSIAWISMERDGYESDLKRLFVADLATGKRTHVNPTFDYNVDMIQWAPDSKGIYFLA 344

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTP 434
            K+ +T   L+ I L       I   
Sbjct: 345 CKEAET--NLWEITLKTGKIRQITQG 368



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/304 (16%), Positives = 99/304 (32%), Gaps = 64/304 (21%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI F+S    S      L VM+ DG   R L+     I     FSP++++V +       
Sbjct: 103 RIAFMSNEGGS----MQLWVMNADGTERRQLSNIEGGITGF-LFSPDEKQVLFTKDIKFG 157

Query: 236 ILRVYLMDTRIDRAPKRIGNF---------------------RSMIL------------A 262
                +         + I +                        MI             A
Sbjct: 158 KRTKDIYPDLDKATGRIITDLMYKHWDEWVETIPHPFIANATDGMITTGKDIMEGEPYEA 217

Query: 263 P----------RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTL-FI 303
           P           +S +G+    + +K            DIY  +L S  T  ++  +   
Sbjct: 218 PMKPWSGIEDFSWSPDGQNIAYASRKKTGMAYSLSTNSDIYIYNLTSGRTHNISEGMMGY 277

Query: 304 NISASYSPDSSQIVFES-DREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +    +SPD   I + S +R+G E    +L+V       +  ++   + +     W+P  
Sbjct: 278 DTYPKFSPDGKSIAWISMERDGYESDLKRLFVADLATGKRTHVNPTFDYNVDMIQWAPDS 337

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             I F      +  +  +     + R + +  +  A  +S     ++ +++   +    L
Sbjct: 338 KGIYFLACKEAETNLWEITLKTGKIRQITQGQHDYA-DFSVRND-VMLAKRHSFELPDDL 395

Query: 419 YSID 422
           Y ++
Sbjct: 396 YRVN 399



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 95/258 (36%), Gaps = 39/258 (15%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--- 217
           DIY  +    G   + +++         I +       DG     +T  +D +  EP   
Sbjct: 162 DIYPDLDKATGRIITDLMYKHWDEWVETIPHPFIANATDG----MITTGKDIMEGEPYEA 217

Query: 218 -----------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---- 262
                       +SP+ Q +AYA+   +     Y + T  D     + + R+  ++    
Sbjct: 218 PMKPWSGIEDFSWSPDGQNIAYAS--RKKTGMAYSLSTNSDIYIYNLTSGRTHNISEGMM 275

Query: 263 -----PRFSSNGKRAL-ISVQKDEAMD----IYSVDLQSNATERLTNTLFINISA-SYSP 311
                P+FS +GK    IS+++D        ++  DL +     +  T   N+    ++P
Sbjct: 276 GYDTYPKFSPDGKSIAWISMERDGYESDLKRLFVADLATGKRTHVNPTFDYNVDMIQWAP 335

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEK 370
           DS  I F + +E +  L+ +       ++I+Q +   +    +S + D ++A        
Sbjct: 336 DSKGIYFLACKEAETNLWEITLKTGKIRQITQGQ---HDYADFSVRNDVMLAKRHSFELP 392

Query: 371 FAIGVMKKDGSQERLLVE 388
             +  +       + +  
Sbjct: 393 DDLYRVNPKNGAAQAVTA 410



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 61/167 (36%), Gaps = 11/167 (6%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMD 243
              + + + +        ++         P+FSP+ + +A+ + +      D+ R+++ D
Sbjct: 252 STNSDIYIYNLTSGRTHNISEGMMGYDTYPKFSPDGKSIAWISMERDGYESDLKRLFVAD 311

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +       F   +   +++ + K       K+   +++ + L++    ++T     
Sbjct: 312 LATGKRTHVNPTFDYNVDMIQWAPDSKGIYFLACKEAETNLWEITLKTGKIRQITQGQHD 371

Query: 304 NISASYSPD---SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
               S   D   + +  F    E  + LY +       + ++ + +A
Sbjct: 372 YADFSVRNDVMLAKRHSF----ELPDDLYRVNPKNGAAQAVTAENKA 414


>gi|258650574|ref|YP_003199730.1| WD40 domain-containing protein beta Propeller [Nakamurella
           multipartita DSM 44233]
 gi|258553799|gb|ACV76741.1| WD40 domain protein beta Propeller [Nakamurella multipartita DSM
           44233]
          Length = 297

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 101/281 (35%), Gaps = 21/281 (7%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             +   KN L V+D     +             P  SP++  + YA   D  I    +  
Sbjct: 15  TRNEDDKNDLSVIDTTTGMVVGKLTDGSPGSQYPTMSPDRSTIVYAQTSDHGIELRMMAA 74

Query: 244 TRIDRAPKRIGN--FRSMILAPRFSS-NGKRALISVQKDEAMD-IYSVDLQSNATERLTN 299
                      +  F      P ++  +     ++ ++ E  D +  + +       +  
Sbjct: 75  DGSGDRSLLAADSEFCPNPQRPAWNPMDTSEIAVACRRGEDPDTLALISVDGTLRSTINT 134

Query: 300 TLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGSD-QKRISQDK-EASYFDPVW 354
                   +YSPD   + + + +        +Y    NGS+  K+I+     A+  DPVW
Sbjct: 135 GFPSFDDPTYSPDGKTLAYWASQTPGSTSGAIYTQPVNGSEAPKQITSPGARANDVDPVW 194

Query: 355 SPQGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR 408
           S  G  I F + + +        I  ++ DGS    + +  +    P+ SP G  L F  
Sbjct: 195 SVDGKTIYFRRATEDASGQSSAQILRVQADGSGLTPITDGTAFDNDPSVSPDGTQLAFFS 254

Query: 409 KKD---GDTGSKLYSIDLNGRNETLINT--PAYAS-DPQWV 443
            +    G+   +++ I+++G     I    P  AS  P+W 
Sbjct: 255 NRTNAAGNNAGQIWVINVDGTGLRQIGIGKPGTASGPPEWS 295



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 55/186 (29%), Gaps = 56/186 (30%)

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +Q++   + + K  L V+ +          D       P  SP    I + + S     +
Sbjct: 10  TQLIATRNEDDKNDLSVIDTTTGMVVGKLTDGSPGSQYPTMSPDRSTIVYAQTSDHGIEL 69

Query: 374 GVMKKDGSQERLL----------------------------------------------- 386
            +M  DGS +R L                                               
Sbjct: 70  RMMAADGSGDRSLLAADSEFCPNPQRPAWNPMDTSEIAVACRRGEDPDTLALISVDGTLR 129

Query: 387 ----VEDSNLQAPTWSPSGRSLIF-SRKKDGDTGSKLYSIDLNGRNE-TLINTPA---YA 437
                   +   PT+SP G++L + + +  G T   +Y+  +NG      I +P      
Sbjct: 130 STINTGFPSFDDPTYSPDGKTLAYWASQTPGSTSGAIYTQPVNGSEAPKQITSPGARAND 189

Query: 438 SDPQWV 443
            DP W 
Sbjct: 190 VDPVWS 195



 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 20/149 (13%), Positives = 50/149 (33%), Gaps = 12/149 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDG--ANIRYLTPSRDQILFEPRFSPNQQKVAY--A 229
           + + L    S   G    ++     +G  A  +  +P       +P +S + + + +  A
Sbjct: 147 DGKTLAYWASQTPGSTSGAIYTQPVNGSEAPKQITSPGARANDVDPVWSVDGKTIYFRRA 206

Query: 230 TYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQK-----DEAMD 283
           T D        ++  + D +    I +  +    P  S +G +      +     + A  
Sbjct: 207 TEDASGQSSAQILRVQADGSGLTPITDGTAFDNDPSVSPDGTQLAFFSNRTNAAGNNAGQ 266

Query: 284 IYSVDLQSNATERLTNTLFINIS--ASYS 310
           I+ +++      ++        S    +S
Sbjct: 267 IWVINVDGTGLRQIGIGKPGTASGPPEWS 295


>gi|166366565|ref|YP_001658838.1| WD repeat-containing protein [Microcystis aeruginosa NIES-843]
 gi|166088938|dbj|BAG03646.1| WD-repeat protein [Microcystis aeruginosa NIES-843]
          Length = 962

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 104/264 (39%), Gaps = 22/264 (8%)

Query: 172 DFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           DF + + F  +  ++VS    N++ + + +           D +     FSP+ + +   
Sbjct: 593 DFVTSVNFSPDGKTLVSVSRDNTIKLWNVETGEEIRTLKGHDGVQSV-NFSPDGKTLVSG 651

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++D+     + L +       + +      + +  FS +GK  + S   D+ + ++  ++
Sbjct: 652 SWDN----TIKLWNVETGEEIRTLKGHNGPVNSVNFSPDGKTLV-SGSGDKTIKLW--NV 704

Query: 290 QSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           ++    R       ++ S ++SPD   +V  S   G   + +      ++ R  +  ++ 
Sbjct: 705 ETGQEIRTLKGHDNSVISVNFSPDGKTLVSGS---GDNTIKLWNVETGEEIRTLKGHDSY 761

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIF 406
                +SP G  +           I +      +E   ++  ++   +  +SP G++L+ 
Sbjct: 762 VNSVNFSPDGKTLVSVSRDNT---IKLWNVKTGKEIRTIKGHDIYFRSVNFSPDGKTLV- 817

Query: 407 SRKKDGDTGSKLYSIDLNGRNETL 430
                GD   KL++++      TL
Sbjct: 818 --SGSGDKTIKLWNVETGTEIRTL 839



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 85/231 (36%), Gaps = 20/231 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R         +    FSP+ + +   + D+     + L +       + +     +  +
Sbjct: 584 ERNRLEGHKDFVTSVNFSPDGKTLVSVSRDN----TIKLWNVETGEEIRTLKGHDGVQ-S 638

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
             FS +GK  + S   D  + ++  ++++    R L        S ++SPD   +V  S 
Sbjct: 639 VNFSPDGKTLV-SGSWDNTIKLW--NVETGEEIRTLKGHNGPVNSVNFSPDGKTLVSGS- 694

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G + + +       + R  +  + S     +SP G  +           I +   +  
Sbjct: 695 --GDKTIKLWNVETGQEIRTLKGHDNSVISVNFSPDGKTLVSGSGDNT---IKLWNVETG 749

Query: 382 QERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +E   +   DS + +  +SP G++L+   +   D   KL+++       T+
Sbjct: 750 EEIRTLKGHDSYVNSVNFSPDGKTLVSVSR---DNTIKLWNVKTGKEIRTI 797



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 96/246 (39%), Gaps = 19/246 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++VSG    ++ + + +           D  +    FSP+ + +   + D+     + L
Sbjct: 688 KTLVSGSGDKTIKLWNVETGQEIRTLKGHDNSVISVNFSPDGKTLVSGSGDN----TIKL 743

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +       + +    S + +  FS +GK  + SV +D  + ++  ++++    R     
Sbjct: 744 WNVETGEEIRTLKGHDSYVNSVNFSPDGKTLV-SVSRDNTIKLW--NVKTGKEIRTIKGH 800

Query: 302 FIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            I   S ++SPD   +V  S   G + + +       + R  +  +       +SP G  
Sbjct: 801 DIYFRSVNFSPDGKTLVSGS---GDKTIKLWNVETGTEIRTLKGHDWFVNSVNFSPDGKT 857

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +           I +   +  QE   +    S + + ++SP G++L+       D   KL
Sbjct: 858 LVSGSNDNT---IKLWNVETGQEIRTLRGHGSFVSSVSFSPDGKTLVSGSD---DKTIKL 911

Query: 419 YSIDLN 424
           +++  +
Sbjct: 912 WNLGTD 917



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 80/219 (36%), Gaps = 14/219 (6%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +      D++++              R+   +  + +  FS +GK  + SV +D  +
Sbjct: 558 GKTLQKQHKYDKEVMNTLQALLNWKSERNRLEGHKDFVTSVNFSPDGKTLV-SVSRDNTI 616

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++  ++++    R         S ++SPD   +V  S       + +      ++ R  
Sbjct: 617 KLW--NVETGEEIRTLKGHDGVQSVNFSPDGKTLVSGS---WDNTIKLWNVETGEEIRTL 671

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPS 400
           +          +SP G  +           I +   +  QE   ++  +    +  +SP 
Sbjct: 672 KGHNGPVNSVNFSPDGKTLV---SGSGDKTIKLWNVETGQEIRTLKGHDNSVISVNFSPD 728

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           G++L+      GD   KL++++      TL    +Y + 
Sbjct: 729 GKTLV---SGSGDNTIKLWNVETGEEIRTLKGHDSYVNS 764



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 65/196 (33%), Gaps = 37/196 (18%)

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKI-AH 156
              G    V   V      +  V        +LW+VK  K+I            R I  H
Sbjct: 754 TLKGHDSYVN-SVNFSPDGKTLVSVSRDNTIKLWNVKTGKEI------------RTIKGH 800

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
               DIY        D  +        +VSG    ++ + + +           D  +  
Sbjct: 801 ----DIYFRSVNFSPDGKT--------LVSGSGDKTIKLWNVETGTEIRTLKGHDWFVNS 848

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             FSP+ + +   + D+     + L +    +  + +    S + +  FS +GK  + S 
Sbjct: 849 VNFSPDGKTLVSGSNDN----TIKLWNVETGQEIRTLRGHGSFVSSVSFSPDGKTLV-SG 903

Query: 277 QKDEAMDIYSVDLQSN 292
             D+ + ++++     
Sbjct: 904 SDDKTIKLWNLGTDWG 919


>gi|186686617|ref|YP_001869813.1| hypothetical protein Npun_R6612 [Nostoc punctiforme PCC 73102]
 gi|186469069|gb|ACC84870.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1229

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 62/327 (18%), Positives = 127/327 (38%), Gaps = 41/327 (12%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
            + L  G+ +K    ++    R+  V   +Q+I    +      R  AH  S  +     
Sbjct: 584 IEGLKVGKRLKTPNKKVEPNTRVLAVATLQQVI----YGVKERNRLEAH--SSSVRGVAF 637

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G          +++ S     ++ + +R+G  ++ LT      ++   FSP+ Q +A
Sbjct: 638 SPDG----------QTIASASDDKTVKLWNRNGQLLQTLT-GHSSSVWGVAFSPDGQTIA 686

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            A+ D      V L + R  +  + +    S +    FS +G+    S   D+ + ++  
Sbjct: 687 SASDDK----TVKLWN-RNGQLLQTLTGHSSSVRGVAFSPDGQTIA-SASDDKTVKLW-- 738

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +      + LT         ++SPD   I   SD    + + +   NG   + ++    +
Sbjct: 739 NRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASD---DKTVKLWNRNGQLLQTLT-GHSS 794

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIF 406
           S +   +SP G  IA          + +  ++G   + L    S+++   +SP G+++  
Sbjct: 795 SVWGVAFSPDGQTIASASDDKT---VKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIAS 851

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT 433
           +     D   KL++     RN  L+ T
Sbjct: 852 ASD---DKTVKLWN-----RNGQLLQT 870



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 103/263 (39%), Gaps = 25/263 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ S     ++ + +R+G  ++ LT     +     FSP+ Q +A A+ D      V L
Sbjct: 683 QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGV-AFSPDGQTIASASDDK----TVKL 737

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            + R  +  + +    S +    FS +G+    S   D+ + ++  +      + LT   
Sbjct: 738 WN-RNGQLLQTLTGHSSSVWGVAFSPDGQTIA-SASDDKTVKLW--NRNGQLLQTLTGHS 793

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 ++SPD   I   SD    + + +   NG   + ++    +S     +SP G  I
Sbjct: 794 SSVWGVAFSPDGQTIASASD---DKTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTI 849

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           A          + +  ++G   + L    S++    + P G+++  +     D   KL++
Sbjct: 850 ASASDDKT---VKLWNRNGQLLQTLTGHSSSVNGVAFRPDGQTIASASD---DKTVKLWN 903

Query: 421 IDLNGRNETLINTPAYASDPQWV 443
                RN  L+ T    S   W 
Sbjct: 904 -----RNGQLLQTLTGHSSSVWG 921



 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 51/263 (19%), Positives = 105/263 (39%), Gaps = 25/263 (9%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ S     ++ + +R+G  ++ LT     +     FSP+ Q +A A+ D      V L
Sbjct: 806  QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGV-AFSPDGQTIASASDDK----TVKL 860

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             + R  +  + +    S +    F  +G+    S   D+ + ++  +      + LT   
Sbjct: 861  WN-RNGQLLQTLTGHSSSVNGVAFRPDGQTIA-SASDDKTVKLW--NRNGQLLQTLTGHS 916

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  ++SPD   I   SD    + + +   NG   + ++    +S +   +SP G  I
Sbjct: 917  SSVWGVAFSPDGQTIASASD---DKTVKLWNRNGQLLQTLT-GHSSSVWGVAFSPDGQTI 972

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A          + +  ++G   + L    S+++   +SP G+++  +     D   KL++
Sbjct: 973  ASASDDKT---VKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASD---DKTVKLWN 1026

Query: 421  IDLNGRNETLINTPAYASDPQWV 443
                 RN  L+ T    S   W 
Sbjct: 1027 -----RNGQLLQTLTGHSSSVWG 1044



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 100/244 (40%), Gaps = 20/244 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ S     ++ + +R+G  ++ LT     +     FSP+ Q +A A+ D      V L
Sbjct: 970  QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGV-AFSPDGQTIASASDDK----TVKL 1024

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             + R  +  + +    S +    FS + +    S   D+ + ++  +      + LT   
Sbjct: 1025 WN-RNGQLLQTLTGHSSSVWGVAFSPDDQTIA-SASDDKTVKLW--NRNGQLLQTLTGHS 1080

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  ++SPD   I   SD    + + +   NG   + ++    +S     +SP G  I
Sbjct: 1081 SSVRGVAFSPDGQTIASASD---DKTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTI 1136

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A          + +  ++G   + L    S++    +SP G+++  +     D   KL++
Sbjct: 1137 ASASDDKT---VKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASS---DKTVKLWN 1190

Query: 421  IDLN 424
            ++L+
Sbjct: 1191 LNLD 1194



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 19/203 (9%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                 +   R+    S +    FS +G+    S   D+ + ++  +      + LT   
Sbjct: 614 QVIYGVKERNRLEAHSSSVRGVAFSPDGQTIA-SASDDKTVKLW--NRNGQLLQTLTGHS 670

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 ++SPD   I   SD    + + +   NG   + ++    +S     +SP G  I
Sbjct: 671 SSVWGVAFSPDGQTIASASD---DKTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTI 726

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           A          + +  ++G   + L    S++    +SP G+++  +     D   KL++
Sbjct: 727 ASASDDKT---VKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASD---DKTVKLWN 780

Query: 421 IDLNGRNETLINTPAYASDPQWV 443
                RN  L+ T    S   W 
Sbjct: 781 -----RNGQLLQTLTGHSSSVWG 798


>gi|281410781|gb|ADA68804.1| HET-E [Podospora anserina]
          Length = 504

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 90/266 (33%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 186 QRVASGSGDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQRVASGSGDK----TIKI 241

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 242 WDTASGTCTQTLEGHGGSVWSVAFSPDGQRVA-SGSDDKTIKIW--DTASGTCTQTLEGH 298

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S  +SPD  ++   SD      + +  +      +  +    S +   +SP G  
Sbjct: 299 GGWVQSVVFSPDGQRVASGSD---DHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQR 355

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A     G    I +           +E     + +  +SP G+ +  S   DG    K+
Sbjct: 356 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGT--IKI 409

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 410 WDAASGTCTQTLEGHGGWVQSVAFSP 435



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 84/226 (37%), Gaps = 12/226 (5%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S+ V SG    ++ + D                +    FSP+ Q+VA  + D      + 
Sbjct: 101 SQRVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDH----TIK 156

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D       + +    S +L+  FS +G+R   S   D+ + I+  D  S    +    
Sbjct: 157 IWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA-SGSGDKTIKIW--DTASGTCTQTLEG 213

Query: 301 LFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              ++ S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G 
Sbjct: 214 HGNSVWSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQ 270

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +A +    +   I         + L      +Q+  +SP G+ + 
Sbjct: 271 RVA-SGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVA 315



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 18  QRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVASGSDDK----TIKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS + +R   S   D+ + I+  D  S    + L   
Sbjct: 74  WDAASGTCTQTLEGHGGRVQSVAFSPDSQRVA-SGSDDKTIKIW--DAASGTCTQTLEGH 130

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   SD      + +  +      +  +   +S     +SP G  
Sbjct: 131 GGRVQSVAFSPDGQRVASGSD---DHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A          I +           +E       +  +SP G+ +       GD   K+
Sbjct: 188 VA---SGSGDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQRVA---SGSGDKTIKI 241

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL           +  
Sbjct: 242 WDTASGTCTQTLEGHGGSVWSVAFSP 267



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 76/225 (33%), Gaps = 12/225 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 270 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDH----TIKI 325

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 326 WDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSIDGTIKIW--DAASGTCTQTLEGH 382

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S       + +  +      +  +          +SP G  
Sbjct: 383 GGWVHSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQR 439

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +A +  S +   I         + L      +Q+  +SP G+ + 
Sbjct: 440 VA-SGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVA 483



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 81/227 (35%), Gaps = 19/227 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ Q+VA  + D      + + DT      + +      + +  FS
Sbjct: 1   LEGHGSSVLSVAFSPDGQRVASGSDDK----TIKIWDTASGTGTQTLEGHGGSVWSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
            +G+R   S   D+ + I+  D  S    + L        S ++SPDS ++   SD    
Sbjct: 57  PDGQRVA-SGSDDKTIKIW--DAASGTCTQTLEGHGGRVQSVAFSPDSQRVASGSD---D 110

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + +  +      +  +          +SP G  +A      +   I +          
Sbjct: 111 KTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVA---SGSDDHTIKIWDAASGTCTQ 167

Query: 386 LVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +E   S++ +  +SP G+ +       GD   K++        +TL
Sbjct: 168 TLEGHGSSVLSVAFSPDGQRVA---SGSGDKTIKIWDTASGTCTQTL 211



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 16/220 (7%)

Query: 170 KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G +   ++F    + V SG   +++ + D                ++   FSP+ Q+VA
Sbjct: 298 HGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA 357

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D      + + D       + +      + +  FS +G+R   S   D  + I+  
Sbjct: 358 SGSIDG----TIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGTIKIW-- 410

Query: 288 DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D  S    + L        S ++SPD  ++   S     + + +  +      +  +   
Sbjct: 411 DAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS---DKTIKIWDTASGTCTQTLEGHG 467

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                  +SP G  +A          I +           
Sbjct: 468 GWVQSVAFSPDGQRVASGSSDNT---IKIWDTASGTCTQT 504


>gi|281410773|gb|ADA68800.1| HET-E [Podospora anserina]
          Length = 504

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 90/266 (33%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 186 QRVASGSGDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQRVASGSGDK----TIKI 241

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 242 WDTASGTCTQTLEGHGGSVWSVAFSPDGQRVA-SGSDDKTIKIW--DTASGTCTQTLEGH 298

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S  +SPD  ++   SD      + +  +      +  +    S +   +SP G  
Sbjct: 299 GGWVQSVVFSPDGQRVASGSD---DHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQR 355

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A     G    I +           +E     + +  +SP G+ +  S   DG    K+
Sbjct: 356 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGT--IKI 409

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 410 WDAASGTCTQTLEGHGGWVQSVAFSP 435



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 88/266 (33%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 60  QRVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDH----TIKI 115

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 116 WDAASGTCTQTLEGHGGRVQSVAFSPDGQRVA-SGSDDHTIKIW--DAASGTCTQTLEGH 172

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  
Sbjct: 173 GSSVLSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQR 229

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A          I +           +E    ++ +  +SP G+ +        D   K+
Sbjct: 230 VA---SGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSD---DKTIKI 283

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 284 WDTASGTCTQTLEGHGGWVQSVVFSP 309



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 85/266 (31%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 18  QRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVASGSDDK----TIKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 74  WDAASGTCTQTLEGHGGRVQSVAFSPDGQRVA-SGSDDHTIKIW--DAASGTCTQTLEGH 130

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   SD      + +  +      +  +   +S     +SP G  
Sbjct: 131 GGRVQSVAFSPDGQRVASGSD---DHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A          I +           +E       +  +SP G+ +       GD   K+
Sbjct: 188 VA---SGSGDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQRVA---SGSGDKTIKI 241

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL           +  
Sbjct: 242 WDTASGTCTQTLEGHGGSVWSVAFSP 267



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 76/225 (33%), Gaps = 12/225 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 270 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDH----TIKI 325

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 326 WDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSIDGTIKIW--DAASGTCTQTLEGH 382

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S       + +  +      +  +          +SP G  
Sbjct: 383 GGWVHSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQR 439

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +A +  S +   I         + L      +Q+  +SP G+ + 
Sbjct: 440 VA-SGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVA 483



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 79/227 (34%), Gaps = 19/227 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ Q+VA  + D      + + DT      + +      + +  FS
Sbjct: 1   LEGHGSSVLSVAFSPDGQRVASGSDDK----TIKIWDTASGTGTQTLEGHGGSVWSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
            +G+R   S   D+ + I+  D  S    + L        S ++SPD  ++   SD    
Sbjct: 57  PDGQRVA-SGSDDKTIKIW--DAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSD---D 110

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +  +      +  +          +SP G  +A      +   I +          
Sbjct: 111 HTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVA---SGSDDHTIKIWDAASGTCTQ 167

Query: 386 LVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +E   S++ +  +SP G+ +       GD   K++        +TL
Sbjct: 168 TLEGHGSSVLSVAFSPDGQRVA---SGSGDKTIKIWDTASGTCTQTL 211



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 16/220 (7%)

Query: 170 KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G +   ++F    + V SG   +++ + D                ++   FSP+ Q+VA
Sbjct: 298 HGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA 357

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D      + + D       + +      + +  FS +G+R   S   D  + I+  
Sbjct: 358 SGSIDG----TIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGTIKIW-- 410

Query: 288 DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D  S    + L        S ++SPD  ++   S     + + +  +      +  +   
Sbjct: 411 DAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS---DKTIKIWDTASGTCTQTLEGHG 467

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                  +SP G  +A          I +           
Sbjct: 468 GWVQSVAFSPDGQRVASGSSDNT---IKIWDTASGTCTQT 504


>gi|304383776|ref|ZP_07366235.1| tricorn family protease MdsD [Prevotella marshii DSM 16973]
 gi|304335300|gb|EFM01571.1| tricorn family protease MdsD [Prevotella marshii DSM 16973]
          Length = 1069

 Score =  104 bits (259), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 57/315 (18%), Positives = 112/315 (35%), Gaps = 40/315 (12%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESV----VSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           D+ Y  +T   G+  + +     +            ++     DG+N   LT  +   + 
Sbjct: 201 DNQYTKLTSFNGEDRTPVWTKDGNAYYYLSEEDGTFNVYKRHLDGSNKTQLTHHKGNPVR 260

Query: 216 EPRFSPNQ------QKVAYATYDDEDILRVYL--MDTRIDRAPKRIGNFRSMILAPRFSS 267
               S +           Y   +     +V +  +  R D   +R    R        S 
Sbjct: 261 SLTVSLDGTLCYGYDGEIYTMREGGQPQKVNITVVTDRNDIDLERQIKTRGATEI-ALSP 319

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NGK     +  D    IY   +    T+++T+T     + ++SPD   + + ++R G  Q
Sbjct: 320 NGKEIAFVLHGD----IYVTSIDYKTTKQITDTPEQERNVNFSPDGKSLTYAAERNGLWQ 375

Query: 328 LYVMQSNGSDQKRISQDKEA----------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +YV +   S +K  +   +           +   P +SP G  IAF +   ++ A+ V+ 
Sbjct: 376 IYVARLKNSSEKAFAYASDIEEEQLVKSSKTSLLPKFSPDGKSIAFFE---DRAALCVVD 432

Query: 378 KDGSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRN 427
                 R +++   L + +       WSP  + L+      G   S+   L +   +G  
Sbjct: 433 IKTKAVRTVMDGKYLYSYSDGDIWFEWSPDSKWLLTEYMGTGGWNSQDVALVNASGSGEL 492

Query: 428 ETLINTPAYASDPQW 442
             L  +     + +W
Sbjct: 493 HNLTQSGYNDGNARW 507



 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 87/243 (35%), Gaps = 37/243 (15%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            L     SP+ + +A++     DI  V           K++    S    P +S +G+  
Sbjct: 24  WLRFSAISPDGRTIAFSY--KGDIFTVPTQ----GGNAKQLTTNASYDAYPVWSPDGQTL 77

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS------------SQIVFES 320
             +  ++ ++DIY +  +  + +RLT      +  ++  +               I F S
Sbjct: 78  AFASAREGSLDIYVMSKEGGSPKRLTTDSGDEVPMTFRDNGHILYQASDMPTVKSIYFSS 137

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-----------TKFSGE 369
                 Q+Y + + G   +  S        D   + +GD++                S  
Sbjct: 138 RM--FPQVYEISTEGGRPRLFSA---TPMCDVNINARGDILYHDQKGYEDVFRKHHRSPI 192

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              I + K D    +L   +   + P W+  G +  +  ++DG     +Y   L+G N+T
Sbjct: 193 TRDIWLCK-DNQYTKLTSFNGEDRTPVWTKDGNAYYYLSEEDGTF--NVYKRHLDGSNKT 249

Query: 430 LIN 432
            + 
Sbjct: 250 QLT 252



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 107/337 (31%), Gaps = 87/337 (25%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +      ++   K  +  +   G N + LT +       P +SP+ Q +A+A+  +   L
Sbjct: 30  ISPDGRTIAFSYKGDIFTVPTQGGNAKQLTTNAS-YDAYPVWSPDGQTLAFASAREGS-L 87

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG------------KRALISVQKDEAMDIY 285
            +Y+M ++   +PKR+       +   F  NG            K    S +      +Y
Sbjct: 88  DIYVM-SKEGGSPKRLTTDSGDEVPMTFRDNGHILYQASDMPTVKSIYFSSRM--FPQVY 144

Query: 286 SVDLQSNATE-------------------------------------------------- 295
            +  +                                                       
Sbjct: 145 EISTEGGRPRLFSATPMCDVNINARGDILYHDQKGYEDVFRKHHRSPITRDIWLCKDNQY 204

Query: 296 -RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +LT+    + +  ++ D +   + S+ +G   +Y    +GS++ +++  K         
Sbjct: 205 TKLTSFNGEDRTPVWTKDGNAYYYLSEEDGTFNVYKRHLDGSNKTQLTHHKGNPVRSLTV 264

Query: 355 SPQGDL------IAFTKFSGE---KFAIGVM--KKDGSQERLLVEDSNLQAPTWSPSGRS 403
           S  G L        +T   G    K  I V+  + D   ER +      +    SP+G+ 
Sbjct: 265 SLDGTLCYGYDGEIYTMREGGQPQKVNITVVTDRNDIDLERQIKTRGATEI-ALSPNGKE 323

Query: 404 LIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASD 439
           + F           +Y   ++ +  + + +TP    +
Sbjct: 324 IAFV------LHGDIYVTSIDYKTTKQITDTPEQERN 354



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 90/256 (35%), Gaps = 31/256 (12%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT---RIDRAPKRIGNFRSMILAPRFS 266
             +    P+FSP+ + +A+  ++D   L V  + T   R     K + ++    +   +S
Sbjct: 403 SSKTSLLPKFSPDGKSIAF--FEDRAALCVVDIKTKAVRTVMDGKYLYSYSDGDIWFEWS 460

Query: 267 SNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDR 322
            + K  L            D+  V+         LT + + + +A ++     ++F+SDR
Sbjct: 461 PDSKWLLTEYMGTGGWNSQDVALVNASGSGELHNLTQSGYNDGNARWALGGKAMIFQSDR 520

Query: 323 EG-----------KEQLYVMQSNGSDQKRISQD-----KEASYFDPVWSPQGDLIAFTKF 366
            G            E +     +  ++ R++++     KE +        +    A    
Sbjct: 521 AGYRSHGSWGAEEDEYIMFFDIDAYERFRMTKEEKELAKEQTADKKKGDDKDKKTAKKPA 580

Query: 367 SGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             E+        D       RL    SN+     SP G +L +    +GD    L+  D 
Sbjct: 581 KKEEPKALTFDLDNCRDRIIRLTSNSSNMGDAILSPGGDTLYYQAAFEGDF--DLWKHDF 638

Query: 424 -NGRNETLINTPAYAS 438
             G+ E ++       
Sbjct: 639 KEGKTELVLKGIGAGR 654



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 7/59 (11%)

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVG 444
                L+    SP GR++ FS K        ++++   G N   + T A Y + P W  
Sbjct: 20  TSPLWLRFSAISPDGRTIAFSYK------GDIFTVPTQGGNAKQLTTNASYDAYPVWSP 72


>gi|284028631|ref|YP_003378562.1| hypothetical protein Kfla_0642 [Kribbella flavida DSM 17836]
 gi|283807924|gb|ADB29763.1| conserved hypothetical protein [Kribbella flavida DSM 17836]
          Length = 285

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 77/210 (36%), Gaps = 28/210 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSNGKRALIS- 275
           SP+   V Y + +D  +  V           +R+ N R           S +G+      
Sbjct: 82  SPDGATV-YVSAEDGHLYAV------SAGVARRVSNDRGEGFKHYLHGVSPDGRTLAYIG 134

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE----GKEQLYVM 331
           + +    ++ +V        ++T+  +    A YS D   I F S+R     G  QL+ +
Sbjct: 135 MDRRGITNVCTVPAAGGDDVQITDDAYAGDGAEYSADGRWIYFNSERAASVPGHAQLFRV 194

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---------KFAIGVMKKDGSQ 382
            + G   ++++ D+  ++F P  +P G  +A+  F               I ++  DG  
Sbjct: 195 PAAGGVPEQLTDDERVNWF-PHPAPDGSAVAYVSFPPGTVGHPADVADVRIRLLTADGGI 253

Query: 383 ERLLV---EDSNLQAPTWSPSGRSLIFSRK 409
             +         +  P+WSP   S  +   
Sbjct: 254 REVATVFGGQGTMNVPSWSPDSNSFAYVAY 283



 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 87/275 (31%), Gaps = 35/275 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + V+D      R +  S + ++  P ++P+ + +      D  + RV +    +   P 
Sbjct: 12  EVFVVDVRTGKSRLVHRSTEVLVEAPNWTPDGEWL--VVNGDGKLFRVAVTGGELQEIP- 68

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--- 308
            +G    +      S +G    +S +     D +   + +    R++N            
Sbjct: 69  -LGGVPPVNNDHVLSPDGATVYVSAE-----DGHLYAVSAGVARRVSNDRGEGFKHYLHG 122

Query: 309 YSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            SPD   + +   DR G   +  + + G D  +I+ D  A      +S  G  I F    
Sbjct: 123 VSPDGRTLAYIGMDRRGITNVCTVPAAGGDDVQITDDAYAGDGAE-YSADGRWIYFNSER 181

Query: 368 ----GEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    +  +   G     L +D      P  +P G ++ +     G  G   +  D
Sbjct: 182 AASVPGHAQLFRVPAAGGVPEQLTDDERVNWFPHPAPDGSAVAYVSFPPGTVG---HPAD 238

Query: 423 LNGRNETLINTPAYASD-------------PQWVG 444
           +      L+       +             P W  
Sbjct: 239 VADVRIRLLTADGGIREVATVFGGQGTMNVPSWSP 273



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 58/174 (33%), Gaps = 52/174 (29%)

Query: 322 REGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG------ 374
           R G+  +++V+       + + +  E     P W+P G+ +      G+ F +       
Sbjct: 6   RSGQLAEVFVVDVRTGKSRLVHRSTEVLVEAPNWTPDGEWLV-VNGDGKLFRVAVTGGEL 64

Query: 375 ---------------VMKKDGSQERLLVEDSNLQAPT---------------------WS 398
                          V+  DG+   +  ED +L A +                      S
Sbjct: 65  QEIPLGGVPPVNNDHVLSPDGATVYVSAEDGHLYAVSAGVARRVSNDRGEGFKHYLHGVS 124

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-------WVGF 445
           P GR+L +    D    + + ++   G ++  I   AYA D         W+ F
Sbjct: 125 PDGRTLAYIGM-DRRGITNVCTVPAAGGDDVQITDDAYAGDGAEYSADGRWIYF 177


>gi|256392792|ref|YP_003114356.1| fibronectin type III domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256359018|gb|ACU72515.1| fibronectin type III domain-containing protein [Catenulispora
           acidiphila DSM 44928]
          Length = 667

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 55/268 (20%), Positives = 94/268 (35%), Gaps = 26/268 (9%)

Query: 193 LCVMDRDGANIRYLTPSR-----DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
           + +   DG+    L           +L  P  SP+  ++A+A  +      V+ +     
Sbjct: 75  IALARPDGSGFHVLDVRGAGMADPPVLVNPAMSPDGTRIAFA--EGGGSKAVWTVGVDGS 132

Query: 248 RAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAMDIYSVDL---QSNATERLTNTL-- 301
              +      S     P +S +G R   + + D       +      S  T  L      
Sbjct: 133 HPVRVSTPPPSAGDTFPAWSPDGVRVFFT-RADGVTPSQILSAFADGSGGTTPLFEAPTG 191

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           F + +    PD S + F         +Y+   +G+     +    A   +P ++P G LI
Sbjct: 192 FSDSNPDVGPDGS-VAFTRSGGPNPGVYLRTPHGA-----TALFAAGGANPSFNPLGTLI 245

Query: 362 AFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           A+         AI     +G  E L+        P+WSP G  + + R +  + G  L  
Sbjct: 246 AYDSPVPFAGRAIFTKPTNGGIETLVQGTGFGTMPSWSPDGFKITY-RDQTPNAGVHLKV 304

Query: 421 IDLNGRNETLINTPAYA----SDPQWVG 444
           +D+N    T + T A      SDP W  
Sbjct: 305 VDVNSDTITSVTTGAQIGTIESDPSWQP 332



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 13/95 (13%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLL-------VEDSNLQAPTWSPSGRSLIFSRKKDG 412
            IAF    G  F I + + DGS   +L        +   L  P  SP G  + F+   +G
Sbjct: 62  FIAFQAPVGNAFGIALARPDGSGFHVLDVRGAGMADPPVLVNPAMSPDGTRIAFA---EG 118

Query: 413 DTGSKLYSIDLNGRNETLINTP---AYASDPQWVG 444
                ++++ ++G +   ++TP   A  + P W  
Sbjct: 119 GGSKAVWTVGVDGSHPVRVSTPPPSAGDTFPAWSP 153



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 55/228 (24%), Gaps = 52/228 (22%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +RI F       G    ++  +  DG++  R  TP        P +SP+  +V +   D 
Sbjct: 111 TRIAFAE-----GGGSKAVWTVGVDGSHPVRVSTPPPSAGDTFPAWSPDGVRVFFTRADG 165

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
               ++             +    +      P    +G     +        +Y      
Sbjct: 166 VTPSQILSAFADGSGGTTPLFEAPTGFSDSNPDVGPDG-SVAFTRSGGPNPGVYLRTPHG 224

Query: 292 ----------------------------------------NATERLTNTLFINISASYSP 311
                                                      E L          S+SP
Sbjct: 225 ATALFAAGGANPSFNPLGTLIAYDSPVPFAGRAIFTKPTNGGIETLVQGTGFGTMPSWSP 284

Query: 312 DSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSP 356
           D  +I +          L V+  N      ++   +      DP W P
Sbjct: 285 DGFKITYRDQTPNAGVHLKVVDVNSDTITSVTTGAQIGTIESDPSWQP 332


>gi|298528654|ref|ZP_07016058.1| peptidase S41 [Desulfonatronospira thiodismutans ASO3-1]
 gi|298512306|gb|EFI36208.1| peptidase S41 [Desulfonatronospira thiodismutans ASO3-1]
          Length = 1212

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 24/198 (12%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G R   S       D++   +Q     RLT     ++ +++SPD   +VF S R
Sbjct: 61  PSISPDGSRIAFSS----GGDLWLAGIQGGEARRLTRHRHDDLHSNWSPDGESLVFTSMR 116

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTK-----FSGEKFAIGV 375
           +G   L+ ++ +G+  ++++   +    +P WS    G  +             +     
Sbjct: 117 DGYMNLWRIREDGTQVRQLTH-SDRFMRNPDWSMDEEGREVITLSGLLEADVYREHRPYR 175

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS----------RKKDGDTGSKLYS-IDLN 424
           +  +G Q   L   +    P  SP G   +F+          R   G     ++      
Sbjct: 176 LPPEGGQHERL-HQAFGSEPRLSPCGSKTVFTRGGFYHDWNKRHYLGPDAMNIWVHHREE 234

Query: 425 GRNETLINTPAYASDPQW 442
            R E +          +W
Sbjct: 235 DRFEAITTRDGDDGMARW 252



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 87/228 (38%), Gaps = 31/228 (13%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P  SP+  ++A+++  D        +        +R+   R   L   +S +G+  + +
Sbjct: 60  FPSISPDGSRIAFSSGGD------LWLAGIQGGEARRLTRHRHDDLHSNWSPDGESLVFT 113

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD--SSQIVFES-----DREGKEQL 328
             +D  M+++ +        +LT++     +  +S D    +++  S     D   + + 
Sbjct: 114 SMRDGYMNLWRIREDGTQVRQLTHSDRFMRNPDWSMDEEGREVITLSGLLEADVYREHRP 173

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------------FSGEKFAIGVM 376
           Y +   G   +R+ Q   A   +P  SP G    FT+               +   I V 
Sbjct: 174 YRLPPEGGQHERLHQ---AFGSEPRLSPCGSKTVFTRGGFYHDWNKRHYLGPDAMNIWVH 230

Query: 377 KKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            ++  + E +   D +     W+    +LIF   +D  T   L+ +DL
Sbjct: 231 HREEDRFEAITTRDGDDGMARWA-DEDTLIFMSDRDLGTV-NLFRLDL 276



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 8/129 (6%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           ++   +   S SPD  ++ F     G   L V       ++ + +  + S     WS  G
Sbjct: 553 DSGLNDRRPSPSPDGKRLAFLR---GPGDLMVKDLTSGKKQTLVEGWDFSMHW-RWSHDG 608

Query: 359 DLIAFTKFS-GEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             IA+++        I ++  DGS+E   +     N   P WS  GR L F   + GD  
Sbjct: 609 QYIAYSQNDLNFSSNIFIVPADGSEEPVNITRHPRNDLNPRWSADGRILSFISNRSGD-N 667

Query: 416 SKLYSIDLN 424
             +Y + L+
Sbjct: 668 YDVYRVYLD 676



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 52/140 (37%), Gaps = 7/140 (5%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P  SP+ +++A+          + + D    +    +  +    +  R+S +G+    S
Sbjct: 560 RPSPSPDGKRLAF----LRGPGDLMVKDLTSGKKQTLVEGWD-FSMHWRWSHDGQYIAYS 614

Query: 276 VQK-DEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
               + + +I+ V    +     +T     +++  +S D   + F S+R G         
Sbjct: 615 QNDLNFSSNIFIVPADGSEEPVNITRHPRNDLNPRWSADGRILSFISNRSGDNYDVYRVY 674

Query: 334 NGSDQKRISQDKEASYFDPV 353
              D + ++  +  +Y+   
Sbjct: 675 LDPDMENMTTRELHNYYREA 694



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 82/244 (33%), Gaps = 35/244 (14%)

Query: 216 EPRFSPNQQKVAYA-----------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           EPR SP   K  +             Y   D + +++     DR  + I          R
Sbjct: 193 EPRLSPCGSKTVFTRGGFYHDWNKRHYLGPDAMNIWVHHREEDRF-EAITTRDGDDGMAR 251

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISAS-YSPDSSQIVFESD 321
           ++       +S +    ++++ +DL     E  RLT+    ++     S D S +V +  
Sbjct: 252 WADEDTLIFMSDRDLGTVNLFRLDLGDEEPEPVRLTDFQERDVKHFDVSADGSTVVLQ-- 309

Query: 322 REGKEQLYVMQSNGSDQK------RISQDKEASY---------FDPVWSPQGDLIAFTKF 366
             G ++LY +    ++ +      R   D    Y          +   SP   ++A   +
Sbjct: 310 --GWDRLYSLDLEDAEAESEPINLRAGDDGPDRYELRSVDREVTEAALSPDNQVLAQVAY 367

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            G  F   V +   ++       +  + P WSP G  L F+    G        + L   
Sbjct: 368 -GRVFVRHVDEYSPTRPVTPGTHARHRHPAWSPDGLRLYFTSDAHGTDSIYKARVALTRE 426

Query: 427 NETL 430
              L
Sbjct: 427 EIRL 430



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 49/297 (16%), Positives = 92/297 (30%), Gaps = 78/297 (26%)

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNS----RILFVSESVVSGIIKNSLCVMDRDGANI 203
           PA W+   H     +  S   ++    S    R+ F+            L V D      
Sbjct: 537 PARWQDAVHFEVVPVVDSGLNDRRPSPSPDGKRLAFLRGPG-------DLMVKDLTSGKK 589

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + L    D  +   R+S + Q +AY+  D      ++++       P  I       L P
Sbjct: 590 QTLVEGWDFSMHW-RWSHDGQYIAYSQNDLNFSSNIFIVPADGSEEPVNITRHPRNDLNP 648

Query: 264 RFSSNGKRALISVQKDE------------------------------------------- 280
           R+S++G+       +                                             
Sbjct: 649 RWSADGRILSFISNRSGDNYDVYRVYLDPDMENMTTRELHNYYREAGKEAEKIRPLPVRL 708

Query: 281 ----------AMDIYSVDLQS--NATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                     +++ + +DL++     E +TN+     S   +P   + +F S   G + L
Sbjct: 709 PGSPPVPTPLSLEPWEMDLENAWRRIEPVTNSSLNKTSNEMTPGGDRFLFNS---GGDDL 765

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             ++ +GS++KR+S        D      G    +T         G+   DG + R 
Sbjct: 766 VSLKWDGSERKRLSSAVNVQGLDIT----GKSAVYTLRG----EAGIAPLDGGEHRR 814



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 71/186 (38%), Gaps = 28/186 (15%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMIL-APRF 265
            +RD      R++ ++  + + +  D   + ++ +D   +   P R+ +F+   +     
Sbjct: 241 TTRDGDDGMARWA-DEDTLIFMSDRDLGTVNLFRLDLGDEEPEPVRLTDFQERDVKHFDV 299

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS----NATERLTNT---------LFIN---ISASY 309
           S++G   ++         +YS+DL+     +    L              ++     A+ 
Sbjct: 300 SADGSTVVLQ----GWDRLYSLDLEDAEAESEPINLRAGDDGPDRYELRSVDREVTEAAL 355

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD+  +     +    +++V   +     R ++    A +  P WSP G  + FT  + 
Sbjct: 356 SPDNQVLA----QVAYGRVFVRHVDEYSPTRPVTPGTHARHRHPAWSPDGLRLYFTSDAH 411

Query: 369 EKFAIG 374
              +I 
Sbjct: 412 GTDSIY 417



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 81/236 (34%), Gaps = 22/236 (9%)

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR------ILFVSESVVSGIIKNSLCV 195
           + +    A    + H   D      T +  D  +R      ++F+S+  +  +    L +
Sbjct: 217 RHYLGPDAMNIWVHHREEDRFEAITTRDGDDGMARWADEDTLIFMSDRDLGTVNLFRLDL 276

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD----------EDILRVYLMDTR 245
            D +   +R LT  +++ +     S +   V    +D            +   + L    
Sbjct: 277 GDEEPEPVR-LTDFQERDVKHFDVSADGSTVVLQGWDRLYSLDLEDAEAESEPINLRAGD 335

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FIN 304
                  + +    +     S + +  +++      + +  VD + + T  +T      +
Sbjct: 336 DGPDRYELRSVDREVTEAALSPDNQ--VLAQVAYGRVFVRHVD-EYSPTRPVTPGTHARH 392

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGD 359
              ++SPD  ++ F SD  G + +Y  +     ++ R+          P  SPQ  
Sbjct: 393 RHPAWSPDGLRLYFTSDAHGTDSIYKARVALTREEIRLGVHDITVDGQPEKSPQKT 448


>gi|325106751|ref|YP_004267819.1| hypothetical protein Plabr_0167 [Planctomyces brasiliensis DSM
           5305]
 gi|324967019|gb|ADY57797.1| hypothetical protein Plabr_0167 [Planctomyces brasiliensis DSM
           5305]
          Length = 335

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 99/273 (36%), Gaps = 24/273 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             V S      L   + +     +L    +  +  P  + +   + +    D        
Sbjct: 55  YYVSSKSGIPRLYACNIESPEDSHLVDVGEGEIGWPFVATDGSCLVFTRQADAKAPANIC 114

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-----------EAMDIYSVDLQ 290
                     ++        +P  SS+G + +     +           ++ D+Y++D+ 
Sbjct: 115 HLDLESGEVTQVTKNEFFDASPSLSSDGSKLVFIRATELRDYSMGGKIWDSWDVYTIDID 174

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--------RIS 342
               +RLT+  +  ISA +  ++  +VF ++ +G  +L  +                +I+
Sbjct: 175 GKNEQRLTSEEYGMISAPFYLENDTVVFAAEVDGNMKLLTLDLGNGLTSSEVQYVDNKIA 234

Query: 343 QDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTW 397
                S  DP      D +AF     K S  ++ I  +    +  + +    +  + PTW
Sbjct: 235 GIHGNSQSDPSPYMHSDRLAFVFSDKKESPFQYEIWSLHLSDNTVQQVTSSGHKNSDPTW 294

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           SP G+ L +      D   ++  ID++G NE++
Sbjct: 295 SPDGKMLFYLSDPQRDRRFEIRKIDVDGTNESV 327



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 57/142 (40%), Gaps = 13/142 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S S D + + + S + G  +LY       +   +    E     P  +  G  + FT+ +
Sbjct: 47  SISQDGT-LYYVSSKSGIPRLYACNIESPEDSHLVDVGEGEIGWPFVATDGSCLVFTRQA 105

Query: 368 GEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGRSLIFSRK---KDGDTGSKL--- 418
             K    +   D   G   ++   +    +P+ S  G  L+F R    +D   G K+   
Sbjct: 106 DAKAPANICHLDLESGEVTQVTKNEFFDASPSLSSDGSKLVFIRATELRDYSMGGKIWDS 165

Query: 419 ---YSIDLNGRNETLINTPAYA 437
              Y+ID++G+NE  + +  Y 
Sbjct: 166 WDVYTIDIDGKNEQRLTSEEYG 187



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 22/63 (34%), Gaps = 3/63 (4%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + R+ FV         +  +  +   D  N      S      +P +SP+ + + Y +  
Sbjct: 250 SDRLAFVFSDKKESPFQYEIWSLHLSD--NTVQQVTSSGHKNSDPTWSPDGKMLFYLSDP 307

Query: 233 DED 235
             D
Sbjct: 308 QRD 310


>gi|281410771|gb|ADA68799.1| HET-E [Podospora anserina]
          Length = 462

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 90/266 (33%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 144 QRVASGSGDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQRVASGSGDK----TIKI 199

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 200 WDTASGTCTQTLEGHGGSVWSVAFSPDGQRVA-SGSDDKTIKIW--DTASGTCTQTLEGH 256

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S  +SPD  ++   SD      + +  +      +  +    S +   +SP G  
Sbjct: 257 GGWVQSVVFSPDGQRVASGSD---DHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQR 313

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A     G    I +           +E     + +  +SP G+ +  S   DG    K+
Sbjct: 314 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGT--IKI 367

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 368 WDAASGTCTQTLEGHGGWVQSVAFSP 393



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 89/266 (33%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 18  QRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVASGSDDK----TIKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 74  WDAASGTCTQTLEGHGGRVQSVAFSPDGQRVA-SGSDDHTIKIW--DAASGTCTQTLEGH 130

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  
Sbjct: 131 GSSVLSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A          I +           +E    ++ +  +SP G+ +        D   K+
Sbjct: 188 VA---SGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSD---DKTIKI 241

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 242 WDTASGTCTQTLEGHGGWVQSVVFSP 267



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 83/225 (36%), Gaps = 12/225 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 60  QRVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDH----TIKI 115

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D       + +    S +L+  FS +G+R   S   D+ + I+  D  S    +     
Sbjct: 116 WDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA-SGSGDKTIKIW--DTASGTCTQTLEGH 172

Query: 302 FINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             ++ S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  
Sbjct: 173 GNSVWSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQR 229

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +A +    +   I         + L      +Q+  +SP G+ + 
Sbjct: 230 VA-SGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVA 273



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 76/225 (33%), Gaps = 12/225 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 228 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDH----TIKI 283

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 284 WDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSIDGTIKIW--DAASGTCTQTLEGH 340

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S       + +  +      +  +          +SP G  
Sbjct: 341 GGWVHSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQR 397

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +A +  S +   I         + L      +Q+  +SP G+ + 
Sbjct: 398 VA-SGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVA 441



 Score = 93.5 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 78/241 (32%), Gaps = 19/241 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ Q+VA  + D      + + DT      + +      + +  FS
Sbjct: 1   LEGHGSSVLSVAFSPDGQRVASGSDDK----TIKIWDTASGTGTQTLEGHGGSVWSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
            +G+R   S   D+ + I+  D  S    + L        S ++SPD  ++   SD    
Sbjct: 57  PDGQRVA-SGSDDKTIKIW--DAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSD---D 110

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +  +      +  +   +S     +SP G  +A          I +          
Sbjct: 111 HTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA---SGSGDKTIKIWDTASGTCTQ 167

Query: 386 LVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +E       +  +SP G+ +       GD   K++        +TL           + 
Sbjct: 168 TLEGHGNSVWSVAFSPDGQRVA---SGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFS 224

Query: 444 G 444
            
Sbjct: 225 P 225



 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 16/220 (7%)

Query: 170 KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G +   ++F    + V SG   +++ + D                ++   FSP+ Q+VA
Sbjct: 256 HGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA 315

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D      + + D       + +      + +  FS +G+R   S   D  + I+  
Sbjct: 316 SGSIDG----TIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGTIKIW-- 368

Query: 288 DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D  S    + L        S ++SPD  ++   S     + + +  +      +  +   
Sbjct: 369 DAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS---DKTIKIWDTASGTCTQTLEGHG 425

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                  +SP G  +A          I +           
Sbjct: 426 GWVQSVAFSPDGQRVASGSSDNT---IKIWDTASGTCTQT 462


>gi|117921499|ref|YP_870691.1| transcriptional regulator domain-containing protein [Shewanella sp.
           ANA-3]
 gi|117613831|gb|ABK49285.1| transcriptional regulator domain protein [Shewanella sp. ANA-3]
          Length = 716

 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 58/322 (18%), Positives = 117/322 (36%), Gaps = 58/322 (18%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYD 232
           ++++ F S S  +G    +   +     N           +     SP+ Q +AY ++++
Sbjct: 244 DTKLFFASRSHATGKCTITQLTLA---TNEMLALAPCSTDMAAIDISPDGQYLAYISSHE 300

Query: 233 DEDILRVYLMDT-RIDRAPKRIG-----NFRSMILAPRFSSNGKRALISVQKDE-AMDIY 285
            + +  +Y +   + D   +R+      N+    LA  FS +GK   I+ +    + DI+
Sbjct: 301 ADKVGGIYRLTLAKADATAERLSCESQCNYEDRDLA--FSPDGKWLAIARRFSNISEDIF 358

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             DL +   +RLT  L      S++P+S  +VF ++  G    + +    +  + +  + 
Sbjct: 359 IRDLANANEKRLTQGLEDIRGLSWTPNSQALVFATEDSGSRNGFTIDIETAHIRPLDVEG 418

Query: 346 -------------------------------------------EASYFDPVWSPQGDLIA 362
                                                        S+ +P +SP+   I 
Sbjct: 419 MSYPSSVSDEGELVYHQYRRQFQMAYFSLGDKVPGSLFPLLYSGISHRNPHYSPEAGRIV 478

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           F         I      G +     +  S +  P WSP G  + F    D + G++++ +
Sbjct: 479 FVSSDTGYNEIWTSDIKGQKLEQHTQLKSRVAYPRWSPDGSKIAFIAPDDRNEGNRIFIL 538

Query: 422 DLNGRNETLINTPAYA-SDPQW 442
           DL  +N T + +  +    P W
Sbjct: 539 DLTNKNITALASSYHNHGRPSW 560



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 105/297 (35%), Gaps = 32/297 (10%)

Query: 145 FSSPASWRKIAHTISD---DIY-------------QSITGEKGDFNSRILFVSESVVSGI 188
           FS    W  IA   S+   DI+             Q +   +G   +             
Sbjct: 337 FSPDGKWLAIARRFSNISEDIFIRDLANANEKRLTQGLEDIRGLSWTPNSQALVFATEDS 396

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              +   +D + A+IR L       +  P    ++ ++ Y  Y  +  +  + +  ++  
Sbjct: 397 GSRNGFTIDIETAHIRPLDVEG---MSYPSSVSDEGELVYHQYRRQFQMAYFSLGDKVPG 453

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           +   +         P +S    R +         +I++ D++    E+ T          
Sbjct: 454 SLFPLLYSGISHRNPHYSPEAGRIVFVSSDTGYNEIWTSDIKGQKLEQHTQLKSRVAYPR 513

Query: 309 YSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +SPD S+I F +  DR    +++++     +   ++     ++  P W+ QG  + F   
Sbjct: 514 WSPDGSKIAFIAPDDRNEGNRIFILDLTNKNITALAS-SYHNHGRPSWNWQGTAV-FAST 571

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           S       +   D S  +++       A  ++ S   L+FSR       + L+ I+L
Sbjct: 572 SDGITEFYL---DNSAPKVI--SPLSMAVGFAKSATELVFSRY----GVNGLWLINL 619



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 105/339 (30%), Gaps = 69/339 (20%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y  ++ ++     R L    S         L    R+    R LTPS   +     +S +
Sbjct: 190 YPRLSHDR-----RWLVYGASRPGVTSSLYLKDFKREDVPARQLTPSTS-VELRAVWSLD 243

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-------- 274
             K+ +A+             T        +    + + A   S +G+            
Sbjct: 244 DTKLFFASRSHATGKCTITQLTLATNEMLALAPCSTDMAAIDISPDGQYLAYISSHEADK 303

Query: 275 --------------------------------SVQKDEAM------------DIYSVDLQ 290
                                           +   D               DI+  DL 
Sbjct: 304 VGGIYRLTLAKADATAERLSCESQCNYEDRDLAFSPDGKWLAIARRFSNISEDIFIRDLA 363

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +   +RLT  L      S++P+S  +VF ++  G    + +    +  + +  D E   +
Sbjct: 364 NANEKRLTQGLEDIRGLSWTPNSQALVFATEDSGSRNGFTIDIETAHIRPL--DVEGMSY 421

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKD----GSQERLLVEDSNLQAPTWSPSGRSLIF 406
               S +G+L+        +F +          GS   LL    + + P +SP    ++F
Sbjct: 422 PSSVSDEGELVY--HQYRRQFQMAYFSLGDKVPGSLFPLLYSGISHRNPHYSPEAGRIVF 479

Query: 407 SRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
                G   +++++ D+ G+  E      +  + P+W  
Sbjct: 480 VSSDTG--YNEIWTSDIKGQKLEQHTQLKSRVAYPRWSP 516



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 90/275 (32%), Gaps = 35/275 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
            ++  L  +D DG  I  +  +  ++L  P          Y   DD +       +T++ 
Sbjct: 88  HLRQQLLPLDVDGGVIETVRKAGYRLLLPP---------IYDQLDDTEEDLRQTTETKLQ 138

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A +R+     ++ A          + S+     +      +       LT         
Sbjct: 139 HANQRLRLMAMVLGAVA-------VVSSLFIGMHLYQDKQRMTDTQMTVLTRDPGSERYP 191

Query: 308 SYSPDSSQIVFESDREG-KEQLYVMQSNGSD--QKRISQDKEASYFDPVWSPQGDLIAFT 364
             S D   +V+ + R G    LY+      D   ++++          VWS     + F 
Sbjct: 192 RLSHDRRWLVYGASRPGVTSSLYLKDFKREDVPARQLTPSTSVELRA-VWSLDDTKLFFA 250

Query: 365 KFSG--EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             S    K  I  +    ++   L    +++ A   SP G+ L +    + D    +Y +
Sbjct: 251 SRSHATGKCTITQLTLATNEMLALAPCSTDMAAIDISPDGQYLAYISSHEADKVGGIYRL 310

Query: 422 DL---NGRNETLI---------NTPAYASDPQWVG 444
            L   +   E L             A++ D +W+ 
Sbjct: 311 TLAKADATAERLSCESQCNYEDRDLAFSPDGKWLA 345


>gi|281410779|gb|ADA68803.1| HET-E [Podospora anserina]
          Length = 504

 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 90/266 (33%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 186 QRVASGSGDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQRVASGSGDK----TIKI 241

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 242 WDTASGTCTQTLEGHGGSVWSVAFSPDGQRVA-SGSDDKTIKIW--DTASGTCTQTLEGH 298

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S  +SPD  ++   SD      + +  +      +  +    S +   +SP G  
Sbjct: 299 GGWVQSVVFSPDGQRVASGSD---DHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQR 355

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A     G    I +           +E     + +  +SP G+ +  S   DG    K+
Sbjct: 356 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGT--IKI 409

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 410 WDAASGTCTQTLEGHGGWVQSVAFSP 435



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 90/266 (33%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG   N++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 60  QRVASGSSDNTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDK----TIKI 115

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 116 WDTASGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSDDHTIKIW--DAASGTCTQTLEGH 172

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  
Sbjct: 173 GSSVLSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQR 229

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A          I +           +E    ++ +  +SP G+ +        D   K+
Sbjct: 230 VA---SGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSD---DKTIKI 283

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 284 WDTASGTCTQTLEGHGGWVQSVVFSP 309



 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 86/266 (32%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 228 QRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDK----TIKI 283

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 284 WDTASGTCTQTLEGHGGWVQSVVFSPDGQRVA-SGSDDHTIKIW--DAVSGTCTQTLEGH 340

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S       + +  +      +  +          +SP G  
Sbjct: 341 GDSVWSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQR 397

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A     G    I +           +E     +Q+  +SP G+ +        D   K+
Sbjct: 398 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVA---SGSSDKTIKI 451

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 452 WDTASGTCTQTLEGHGGWVQSVAFSP 477



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 87/266 (32%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D+     + +
Sbjct: 18  QRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVASGSSDN----TIKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 74  WDAASGTCTQTLEGHGGWVQSVAFSPDGQRVA-SGSSDKTIKIW--DTASGTCTQTLEGH 130

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   SD      + +  +      +  +   +S     +SP G  
Sbjct: 131 GDSVWSVAFSPDGQRVASGSD---DHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A          I +           +E       +  +SP G+ +       GD   K+
Sbjct: 188 VA---SGSGDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQRVA---SGSGDKTIKI 241

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL           +  
Sbjct: 242 WDTASGTCTQTLEGHGGSVWSVAFSP 267



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 75/223 (33%), Gaps = 12/223 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 270 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDH----TIKI 325

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 326 WDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSIDGTIKIW--DAASGTCTQTLEGH 382

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S       + +  +      +  +          +SP G  
Sbjct: 383 GGWVHSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQR 439

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
           +A +  S +   I         + L      +Q+  +SP G+ 
Sbjct: 440 VA-SGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQR 481



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 80/227 (35%), Gaps = 19/227 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ Q+VA  + D      + + DT      + +      + +  FS
Sbjct: 1   LEGHGSSVLSVAFSPDGQRVASGSDDK----TIKIWDTASGTGTQTLEGHGGSVWSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
            +G+R   S   D  + I+  D  S    + L        S ++SPD  ++   S     
Sbjct: 57  PDGQRVA-SGSSDNTIKIW--DAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS---D 110

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + +  +      +  +    S +   +SP G  +A      +   I +          
Sbjct: 111 KTIKIWDTASGTCTQTLEGHGDSVWSVAFSPDGQRVA---SGSDDHTIKIWDAASGTCTQ 167

Query: 386 LVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +E   S++ +  +SP G+ +       GD   K++        +TL
Sbjct: 168 TLEGHGSSVLSVAFSPDGQRVA---SGSGDKTIKIWDTASGTCTQTL 211



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 70/220 (31%), Gaps = 16/220 (7%)

Query: 170 KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G +   ++F    + V SG   +++ + D                ++   FSP+ Q+VA
Sbjct: 298 HGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA 357

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D      + + D       + +      + +  FS +G+R   S   D  + I+  
Sbjct: 358 SGSIDG----TIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGTIKIW-- 410

Query: 288 DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D  S    + L        S ++SPD  ++   S     + + +  +      +  +   
Sbjct: 411 DAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS---DKTIKIWDTASGTCTQTLEGHG 467

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                  +SP G   A          I +           
Sbjct: 468 GWVQSVAFSPDGQREASGSSDNT---IKIWDTASGTCTQT 504


>gi|34540516|ref|NP_904995.1| prolyl oligopeptidase family protein [Porphyromonas gingivalis W83]
 gi|34396829|gb|AAQ65894.1| prolyl oligopeptidase family protein [Porphyromonas gingivalis W83]
          Length = 648

 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 90/293 (30%), Gaps = 69/293 (23%)

Query: 218 RFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+ +   YA            R            K+I +  S   AP + ++GKR  
Sbjct: 10  ALSPDGKTAVYAVSFPDVKTNKATRELFTVNLDGSGRKQITDTESNEYAPAWMADGKRIA 69

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------------ 321
               +  +M ++ ++       +L+N         +SPD  Q++F  D            
Sbjct: 70  FMSNEGGSMQLWVMNADGTERRQLSNIEGGITGFLFSPDEKQVLFTKDIKFGKRTKDIYP 129

Query: 322 ----REGK-----------------EQLYVMQSNGSDQKRISQDKEASYFDP-------- 352
                 G+                    ++  +       I+  K+    +P        
Sbjct: 130 DLDKATGRIITDLMYKHWDEWVETIPHPFIANATDG---MITTGKDIMEGEPYEAPMKPW 186

Query: 353 ------VWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVED--SNLQAPT 396
                  WSP G  IA+                 I +      +   + E        P 
Sbjct: 187 SGIEDFSWSPDGQNIAYASRKKTGMAYSLSTNSDIYIYNLASGRTHNISEGMMGYDTYPK 246

Query: 397 WSPSGRSLIF-SRKKDGDTG--SKLYSIDL-NGRNETLINTPAYASDP-QWVG 444
           +SP G+S+ + S ++DG      +L+  DL  G+   +  T  Y  D  QW  
Sbjct: 247 FSPDGKSIAWISMERDGYESDLKRLFVADLATGKRTHVNPTFDYNVDMIQWAP 299



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/326 (15%), Positives = 104/326 (31%), Gaps = 66/326 (20%)

Query: 170 KGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             D  + +  VS   V +      L  ++ DG+  + +T +     + P +  + +++A+
Sbjct: 12  SPDGKTAVYAVSFPDVKTNKATRELFTVNLDGSGRKQITDTESN-EYAPAWMADGKRIAF 70

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--VQKDEAMDIYS 286
            + ++   +++++M+       +++ N    I    FS + K+ L +  ++  +      
Sbjct: 71  MS-NEGGSMQLWVMNAD-GTERRQLSNIEGGITGFLFSPDEKQVLFTKDIKFGKRTKDIY 128

Query: 287 VDLQSNATERLTN--------------TLFI---------------NISA---------- 307
            DL       +T+                FI                             
Sbjct: 129 PDLDKATGRIITDLMYKHWDEWVETIPHPFIANATDGMITTGKDIMEGEPYEAPMKPWSG 188

Query: 308 ----SYSPDSSQIVFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
               S+SPD   I + S +             +Y+          IS+        P +S
Sbjct: 189 IEDFSWSPDGQNIAYASRKKTGMAYSLSTNSDIYIYNLASGRTHNISEGMMGYDTYPKFS 248

Query: 356 PQGDLIAFTKFSGEKFA-----IGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSR 408
           P G  IA+     + +      + V      +        D N+    W+P  + + F  
Sbjct: 249 PDGKSIAWISMERDGYESDLKRLFVADLATGKRTHVNPTFDYNVDMIQWAPDSKGIYFLA 308

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTP 434
            K+ +T   L+ I L       I   
Sbjct: 309 CKEAET--NLWEITLKTGKIRQITQG 332



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 53/315 (16%), Positives = 104/315 (33%), Gaps = 65/315 (20%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI F+S    S      L VM+ DG   R L+     I     FSP++++V +       
Sbjct: 67  RIAFMSNEGGS----MQLWVMNADGTERRQLSNIEGGITGF-LFSPDEKQVLFTKDIKFG 121

Query: 236 ILRVYLMDTRIDRAPKRIGNF---------------------RSMIL------------A 262
                +         + I +                        MI             A
Sbjct: 122 KRTKDIYPDLDKATGRIITDLMYKHWDEWVETIPHPFIANATDGMITTGKDIMEGEPYEA 181

Query: 263 P----------RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTL-FI 303
           P           +S +G+    + +K            DIY  +L S  T  ++  +   
Sbjct: 182 PMKPWSGIEDFSWSPDGQNIAYASRKKTGMAYSLSTNSDIYIYNLASGRTHNISEGMMGY 241

Query: 304 NISASYSPDSSQIVFES-DREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +    +SPD   I + S +R+G E    +L+V       +  ++   + +     W+P  
Sbjct: 242 DTYPKFSPDGKSIAWISMERDGYESDLKRLFVADLATGKRTHVNPTFDYNVDMIQWAPDS 301

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             I F      +  +  +     + R + +  +  A  +S     ++ +++   +    L
Sbjct: 302 KGIYFLACKEAETNLWEITLKTGKIRQITQGQHDYA-DFSVRND-VMLAKRHSFELPDDL 359

Query: 419 YSIDL-NGRNETLIN 432
           Y ++L NG  + +  
Sbjct: 360 YRVNLKNGAAQAVTA 374



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 90/256 (35%), Gaps = 35/256 (13%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--- 217
           DIY  +    G   + +++         I +       DG     +T  +D +  EP   
Sbjct: 126 DIYPDLDKATGRIITDLMYKHWDEWVETIPHPFIANATDG----MITTGKDIMEGEPYEA 181

Query: 218 -----------RFSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
                       +SP+ Q +AYA+       Y       +Y+ +    R           
Sbjct: 182 PMKPWSGIEDFSWSPDGQNIAYASRKKTGMAYSLSTNSDIYIYNLASGRTHNISEGMMGY 241

Query: 260 ILAPRFSSNGKRAL-ISVQKDEAMD----IYSVDLQSNATERLTNTLFINISA-SYSPDS 313
              P+FS +GK    IS+++D        ++  DL +     +  T   N+    ++PDS
Sbjct: 242 DTYPKFSPDGKSIAWISMERDGYESDLKRLFVADLATGKRTHVNPTFDYNVDMIQWAPDS 301

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEKFA 372
             I F + +E +  L+ +       ++I+Q +   +    +S + D ++A          
Sbjct: 302 KGIYFLACKEAETNLWEITLKTGKIRQITQGQ---HDYADFSVRNDVMLAKRHSFELPDD 358

Query: 373 IGVMKKDGSQERLLVE 388
           +  +       + +  
Sbjct: 359 LYRVNLKNGAAQAVTA 374


>gi|328885898|emb|CCA59137.1| WD40 beta Propeller [Streptomyces venezuelae ATCC 10712]
          Length = 1097

 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 60/297 (20%), Positives = 108/297 (36%), Gaps = 35/297 (11%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            +SRI F      +G    SL  +  D ++             +P  S    ++ +A+  
Sbjct: 83  GDSRIAF------AGTRHRSLGRVTGDTSSAPLFGDGPVHQDLQP--SALGDQLVFASRR 134

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQ-----KDEAMDIYS 286
           DE   +VYL     D +  R+     M  A PR + +G+  +              D++ 
Sbjct: 135 DERRPQVYLR--APDGSVLRLT--EGMDAANPRLTPDGRSVVFDSAEAATGGGRQRDLWR 190

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQD 344
           V        RLT+T    +  + SP+  +I + SD +     Q+YV    G D  R++  
Sbjct: 191 VRTDGTGLTRLTDTPANEVHPTVSPEGGRIAYSSDGDPLVGRQVYVRPLAGGDATRVTDP 250

Query: 345 KEASYFDPVWSP-----QGDLIAFTKFSGEKFAIGVMK--KDGSQERLLVEDSNLQAPTW 397
                 +PVW+P       D+IA+T        +       DG        +       W
Sbjct: 251 ANGRATEPVWNPVDDAENRDVIAYTATGSSGPRLRWTDGRADGPLLAGAQANWRTHGAAW 310

Query: 398 SPSGRSLIFSR-----KKDGDTGSKLYSIDLNGR--NETLINTPAYASDPQWVGFMD 447
            P G  L+F       +  GD    ++ + ++       +++       P W+G ++
Sbjct: 311 LPDGDKLLFLSPDRTCECKGDWN-HVFQVPVHSEQVPALILSEDREVGSPTWLGPLE 366



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 84/260 (32%), Gaps = 53/260 (20%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRS---MILAPR 264
           D       ++P+ +++    ++      I R+++ D             R        P 
Sbjct: 428 DPWTERQSYTPDGRRIVVTRFEGPKNARIQRIWMADADGTHPAVLPLAGRGEKDWDTDPT 487

Query: 265 FSSNGKRALISVQ-------KDEAMDIYSVDLQSNATE-----RLTNTLFINISASYSPD 312
           FS +G+    +               I   D+ + A           T   +   ++S D
Sbjct: 488 FSPDGRFLAFTRTSPGGVGGAAGPSRILVADVATGAITGEIVPPAGETRGQDAQPTWSAD 547

Query: 313 SSQIVFESDR-----EGKEQLYVMQSNGSDQKRISQDKEAS------YFDPVWSPQGDLI 361
            + + F  +       G + ++ +     +++R    K            P +SP G  I
Sbjct: 548 GTTLAFTRNHVIDGAGGNKHIWTVPVTDLNRQRDLSAKNCPGACQVIDDSPAFSPDGLTI 607

Query: 362 AFTKFSG-----EKFAIGVMKKDGSQERLLVEDSNLQAP-------------------TW 397
           AF + +G     E+  I +    G   R+L+  +    P                    W
Sbjct: 608 AFNRKNGAGRIDERNGILLTDLKGDDCRVLLPPAARGLPGACGRELPEAPGPFQPRDAAW 667

Query: 398 SPSGRSLIFSRKKDGDTGSK 417
           +  G+SL+ S + D +  S+
Sbjct: 668 TADGKSLVLSARPDREPNSQ 687



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 77/274 (28%), Gaps = 53/274 (19%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLT---PSRDQILFEPRFSPNQQKVAYAT-- 230
           RI+              + + D DG +   L            +P FSP+ + +A+    
Sbjct: 442 RIVVTRFEGPKNARIQRIWMADADGTHPAVLPLAGRGEKDWDTDPTFSPDGRFLAFTRTS 501

Query: 231 ----YDDEDILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRALISVQ----- 277
                      R+ + D         I    G  R     P +S++G     +       
Sbjct: 502 PGGVGGAAGPSRILVADVATGAITGEIVPPAGETRGQDAQPTWSADGTTLAFTRNHVIDG 561

Query: 278 KDEAMDIYSVDLQSNATER-LT--NTLF----INISASYSPDSSQIVFESDREG-----K 325
                 I++V +     +R L+  N       I+ S ++SPD   I F           +
Sbjct: 562 AGGNKHIWTVPVTDLNRQRDLSAKNCPGACQVIDDSPAFSPDGLTIAFNRKNGAGRIDER 621

Query: 326 EQLYVMQSNGSDQKRISQDKEASY-----------------FDPVWSPQGDLIAFTKFSG 368
             + +    G D + +                          D  W+  G  +  +    
Sbjct: 622 NGILLTDLKGDDCRVLLPPAARGLPGACGRELPEAPGPFQPRDAAWTADGKSLVLSARPD 681

Query: 369 EKFA----IGVMKKDGSQERLLVED--SNLQAPT 396
            +      + V+     +   L  D     + PT
Sbjct: 682 REPNSQEKLKVLNIASGELGKLTNDLPGRHKEPT 715



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 67/207 (32%), Gaps = 35/207 (16%)

Query: 264 RFSSNGKRALISVQKDEA----MDIYSVDLQSNATERLT----NTLFINISASYSPDSSQ 315
            ++ +G+R +++  +         I+  D        L          +   ++SPD   
Sbjct: 435 SYTPDGRRIVVTRFEGPKNARIQRIWMADADGTHPAVLPLAGRGEKDWDTDPTFSPDGRF 494

Query: 316 IVFESD-------REGKEQLYVMQSN----GSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           + F            G  ++ V          +    + +       P WS  G  +AFT
Sbjct: 495 LAFTRTSPGGVGGAAGPSRILVADVATGAITGEIVPPAGETRGQDAQPTWSADGTTLAFT 554

Query: 365 KFS-----GEKFAIGVMKKDGSQERLLVEDSNL--------QAPTWSPSGRSLIFSRKKD 411
           +       G    I  +       +  +   N          +P +SP G ++ F+RK  
Sbjct: 555 RNHVIDGAGGNKHIWTVPVTDLNRQRDLSAKNCPGACQVIDDSPAFSPDGLTIAFNRKNG 614

Query: 412 G---DTGSKLYSIDLNGRNETLINTPA 435
               D  + +   DL G +  ++  PA
Sbjct: 615 AGRIDERNGILLTDLKGDDCRVLLPPA 641



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 62/374 (16%), Positives = 121/374 (32%), Gaps = 69/374 (18%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
               +Q    +  +      ++  T +++++ +++ E G    RI +   S    ++   
Sbjct: 180 TGGGRQRDLWRVRTDGTGLTRLTDTPANEVHPTVSPEGG----RIAY--SSDGDPLVGRQ 233

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSP-----NQQKVAYATYDDEDILRVYLMDTRID 247
           + V    G +   +T   +    EP ++P     N+  +AY         R+   D R D
Sbjct: 234 VYVRPLAGGDATRVTDPANGRATEPVWNPVDDAENRDVIAYTATGSSGP-RLRWTDGRAD 292

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTL 301
                            +  +G + L          K +   ++ V + S     L  + 
Sbjct: 293 GPLLAGAQANWRTHGAAWLPDGDKLLFLSPDRTCECKGDWNHVFQVPVHSEQVPALILSE 352

Query: 302 FINI-SASYS---PDSSQIVFESDREGKEQLYVMQS--NGSDQKRISQD----------- 344
              + S ++         +V     EG   + +     +GSD + ++             
Sbjct: 353 DREVGSPTWLGPLEGGGTVVERVSAEGPHAVTLQDVRMDGSDPRDLNLPILNEDPAADTN 412

Query: 345 ---------KEASYFDP-----VWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQERLL 386
                    +  + +DP      ++P G  I  T+F G K      I +   DG+   +L
Sbjct: 413 TAPAKDPLFQPGADYDPWTERQSYTPDGRRIVVTRFEGPKNARIQRIWMADADGTHPAVL 472

Query: 387 VEDSNLQ-----APTWSPSGRSLIFSRK-----KDGDTGSKLYSIDL-NGRNETLINTP- 434
                 +      PT+SP GR L F+R            S++   D+  G     I  P 
Sbjct: 473 PLAGRGEKDWDTDPTFSPDGRFLAFTRTSPGGVGGAAGPSRILVADVATGAITGEIVPPA 532

Query: 435 ----AYASDPQWVG 444
                  + P W  
Sbjct: 533 GETRGQDAQPTWSA 546


>gi|197122507|ref|YP_002134458.1| hypothetical protein AnaeK_2102 [Anaeromyxobacter sp. K]
 gi|196172356|gb|ACG73329.1| WD40 domain protein beta Propeller [Anaeromyxobacter sp. K]
          Length = 1078

 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 76/210 (36%), Gaps = 27/210 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL-------------- 237
            L  +D      R LT    +   +P   P    V Y  ++    +              
Sbjct: 414 DLWAVDLARGARRRLTDG--ERAGDPAVVPGGGAVVYVRHEPGGRMALVRRTLPPAPMVP 471

Query: 238 --------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                   R  L      +         + +  P  S +G+R    +Q+    D+     
Sbjct: 472 ADVTIRERRAELAVPPPAQVEVLFARPGAQVYGPAPSPDGRRIAFELQEGGRRDVAL--W 529

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +  A  R+T+   ++   +++PD   ++F SDR G   LY  ++     ++++ + E+  
Sbjct: 530 EDGAVRRVTDDDALDTGPAWTPDGRYLLFASDRGGVYDLYAWEAATGALRQVT-NVESGA 588

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           F P  SP G  IAF  F  E + +  +  D
Sbjct: 589 FQPAVSPDGRTIAFVTFGREGYDVATLPFD 618



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 75/292 (25%), Gaps = 75/292 (25%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY---------------------- 240
                      +  PR+SP+   +AY   D +     Y                      
Sbjct: 332 APTRLTRAGGRVETPRWSPDGSFLAYQKRDLDRRPGTYRVTPGGADLGLALTVDANGALS 391

Query: 241 -----------------------LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
                                  L    + R  +R          P     G   +    
Sbjct: 392 MASPREAVVAIGEVWRLHRTYDDLWAVDLARGARRRLTDGERAGDPAVVPGGGAVVYVRH 451

Query: 278 KDEAMDIYS---------VDLQSNATER--------------LTNTLFINI-SASYSPDS 313
           +                 V       ER              L       +   + SPD 
Sbjct: 452 EPGGRMALVRRTLPPAPMVPADVTIRERRAELAVPPPAQVEVLFARPGAQVYGPAPSPDG 511

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +I FE    G+  + +        +R++ D +A    P W+P G  + F    G  + +
Sbjct: 512 RRIAFELQEGGRRDVALW--EDGAVRRVTDD-DALDTGPAWTPDGRYLLFASDRGGVYDL 568

Query: 374 GVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +      R +   +S    P  SP GR++ F     G  G  + ++  +
Sbjct: 569 YAWEAATGALRQVTNVESGAFQPAVSPDGRTIAFVTF--GREGYDVATLPFD 618



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 4/109 (3%)

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERL-LVEDSNLQ 393
           +   R+++        P WSP G  +A+ K     +     +   G+   L L  D+N  
Sbjct: 331 TAPTRLTRAG-GRVETPRWSPDGSFLAYQKRDLDRRPGTYRVTPGGADLGLALTVDANGA 389

Query: 394 APTWSPSGRSLIFSR-KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
               SP    +      +   T   L+++DL       +     A DP 
Sbjct: 390 LSMASPREAVVAIGEVWRLHRTYDDLWAVDLARGARRRLTDGERAGDPA 438


>gi|315123008|ref|YP_004065014.1| putative peptidase [Pseudoalteromonas sp. SM9913]
 gi|315016768|gb|ADT70105.1| putative peptidase [Pseudoalteromonas sp. SM9913]
          Length = 672

 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 98/281 (34%), Gaps = 59/281 (20%)

Query: 222 NQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           + + V +            +  ++ +D    +  + + +   M  +P  S +G+R     
Sbjct: 43  DGKTVYFVRNRMDIKTDRKVGNIWSVDYSTGQL-QPLTSGVYMDYSPVVSPDGQRLAFIS 101

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----------------- 319
            ++ +  IY   L++ A  +++N      S +++PDS+Q+VF                  
Sbjct: 102 NRNGSNQIYIKWLKTGAIAKVSNLTSNPSSLTWTPDSNQLVFSMFVPMAASAPVSLPGKP 161

Query: 320 -----------------------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                                     +G  QL+ + +NG + ++++ D   +  +  +S 
Sbjct: 162 KGATWAEPAKYIDDVYYRADGGGYTEKGFSQLFTLDANGGNAQQLTNDNFNNGGEVSFSK 221

Query: 357 QGDLIAFTKFSGEKFAI-------GVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR 408
            G  + F+    E   +         +  D      L E +   Q P  SP G+ L ++ 
Sbjct: 222 DGKTLYFSANRNENNELKPTNTEVYQLDLDSLAIFPLTERNGPDQQPKVSPDGKYLAYTG 281

Query: 409 KKDGDT---GSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
             D  T    ++LY  DL   N   + T         +W  
Sbjct: 282 YDDKRTNYENTQLYIRDLKTGNTQSLTTDFDRSVGQIKWSA 322



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 104/312 (33%), Gaps = 62/312 (19%)

Query: 164 QSITGEKGDFNSRILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           +         + + ++   +     +     ++  +D     ++ LT S   + + P  S
Sbjct: 33  EYANQIDITEDGKTVYFVRNRMDIKTDRKVGNIWSVDYSTGQLQPLT-SGVYMDYSPVVS 91

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV---- 276
           P+ Q++A+ +  +    ++Y+   +     K + N  S   +  ++ +  + + S+    
Sbjct: 92  PDGQRLAFISNRNGSN-QIYIKWLKTGAIAK-VSNLTSNPSSLTWTPDSNQLVFSMFVPM 149

Query: 277 ------------------------------------QKDEAMDIYSVDLQSNATERLTNT 300
                                                +     ++++D      ++LTN 
Sbjct: 150 AASAPVSLPGKPKGATWAEPAKYIDDVYYRADGGGYTEKGFSQLFTLDANGGNAQQLTND 209

Query: 301 LFINI-SASYSPDSSQIVFESDREGKEQL-------YVMQSNGSDQKRISQDKEASYFDP 352
            F N    S+S D   + F ++R    +L       Y +  +      ++ ++      P
Sbjct: 210 NFNNGGEVSFSKDGKTLYFSANRNENNELKPTNTEVYQLDLDSLAIFPLT-ERNGPDQQP 268

Query: 353 VWSPQGDLIAFT-----KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
             SP G  +A+T     + + E   + +        + L  D +       WS + + L 
Sbjct: 269 KVSPDGKYLAYTGYDDKRTNYENTQLYIRDLKTGNTQSLTTDFDRSVGQIKWSANSKGLY 328

Query: 406 FSRKKDGDTGSK 417
           FS   +G T   
Sbjct: 329 FSYADEGQTALA 340



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 12/168 (7%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-------MD 283
           Y ++   +++ +D     A +   +  +      FS +GK    S  ++E         +
Sbjct: 185 YTEKGFSQLFTLDANGGNAQQLTNDNFNNGGEVSFSKDGKTLYFSANRNENNELKPTNTE 244

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQ 338
           +Y +DL S A   LT     +     SPD   + +    +        QLY+      + 
Sbjct: 245 VYQLDLDSLAIFPLTERNGPDQQPKVSPDGKYLAYTGYDDKRTNYENTQLYIRDLKTGNT 304

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           + ++ D + S     WS     + F+     + A+    + G ++ + 
Sbjct: 305 QSLTTDFDRSVGQIKWSANSKGLYFSYADEGQTALAYQPRSGKRKVIT 352



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 60/152 (39%), Gaps = 10/152 (6%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGI----IKNSLCVMDRDGANIRYLTPSR 210
           A  +++D + +        + + L+ S +             +  +D D   I  LT  R
Sbjct: 203 AQQLTNDNFNNGGEVSFSKDGKTLYFSANRNENNELKPTNTEVYQLDLDSLAIFPLTE-R 261

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +    +P+ SP+ + +AY  YDD+       ++Y+ D +         +F   +   ++S
Sbjct: 262 NGPDQQPKVSPDGKYLAYTGYDDKRTNYENTQLYIRDLKTGNTQSLTTDFDRSVGQIKWS 321

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +N K    S   +    + +   +S   + +T
Sbjct: 322 ANSKGLYFSYADEGQTAL-AYQPRSGKRKVIT 352


>gi|209965114|ref|YP_002298029.1| prolyl oligopeptidase family protein [Rhodospirillum centenum SW]
 gi|209958580|gb|ACI99216.1| prolyl oligopeptidase family protein [Rhodospirillum centenum SW]
          Length = 688

 Score =  103 bits (258), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 78/255 (30%), Gaps = 70/255 (27%)

Query: 260 ILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I  P  S +G+ A++      +      +D++ V        +LT+         +SPD 
Sbjct: 37  IGTPALSPDGRSAVVPVTAYDTATDGRDVDLWLVPTAGGEARQLTSDPAAESEPQWSPDG 96

Query: 314 SQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
             I F + R+G +  QLYV+   G + +R++ +       P W P    IAF        
Sbjct: 97  RWIAFVARRDGDKAAQLYVLPVAGGEARRVT-EVPTGVRLPRWLPDSRRIAFLTRVWTDI 155

Query: 367 -----------------------------------SGEKFAIGVMKKDGSQERLLVED-- 389
                                                 +  + +   DG     +     
Sbjct: 156 DDWQEQGRRLAERDSSKMTAKVWDRPPLMFWDQWLDDREAHVYIAALDGGAPVAVTRPTG 215

Query: 390 ----SNLQAPT---WSPSGRSLIFSRKKDG---DTGSKLYSIDLNGRNETLIN------- 432
                    P     +P G  + F+   D         L+   ++G N   +        
Sbjct: 216 KAVAFRDPGPVPYDIAPDGTEIAFAVDVDPTGTRPNVDLFVAGIDGSNPRNLTADNPDGS 275

Query: 433 --TPAYASDPQWVGF 445
             +P Y+ D +W+ F
Sbjct: 276 DGSPLYSPDGRWLAF 290



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 51/322 (15%), Positives = 103/322 (31%), Gaps = 64/322 (19%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
             +    +      L ++   G   R LT S      EP++SP+ + +A+    D D   
Sbjct: 53  VTAYDTATDGRDVDLWLVPTAGGEARQLT-SDPAAESEPQWSPDGRWIAFVARRDGDKAA 111

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------------- 277
              +        +R+    + +  PR+  + +R     +                     
Sbjct: 112 QLYVLPVAGGEARRVTEVPTGVRLPRWLPDSRRIAFLTRVWTDIDDWQEQGRRLAERDSS 171

Query: 278 -------------------KDEAMDIYSVDLQSNATERLTNTLF-----INISAS---YS 310
                               D    +Y   L   A   +T          +        +
Sbjct: 172 KMTAKVWDRPPLMFWDQWLDDREAHVYIAALDGGAPVAVTRPTGKAVAFRDPGPVPYDIA 231

Query: 311 PDSSQIVFESDRE-----GKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFT 364
           PD ++I F  D +         L+V   +GS+ + ++ D  + S   P++SP G  +AF 
Sbjct: 232 PDGTEIAFAVDVDPTGTRPNVDLFVAGIDGSNPRNLTADNPDGSDGSPLYSPDGRWLAFQ 291

Query: 365 KFS-----GEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSK 417
           +       G    + +  +   + R L ED +  A    W+P  ++L      D     +
Sbjct: 292 QQRVYGFYGANAKLMLYDRRAGKTRGLTEDWDRSASGIVWAPDSKALY--GAIDDAATRR 349

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           +Y   ++G     +      ++
Sbjct: 350 IYRFAVDGGTPKPVTAGRDFAE 371



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 76/237 (32%), Gaps = 21/237 (8%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +  F +R+     + +    +    + +RD + +      R  ++F  ++  +++   
Sbjct: 142 SRRIAFLTRVW----TDIDDWQEQGRRLAERDSSKMTAKVWDRPPLMFWDQWLDDREAHV 197

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-----AM 282
           Y    D          T    A +  G     I     + +G     +V  D       +
Sbjct: 198 YIAALDGGAPVAVTRPTGKAVAFRDPGPVPYDI-----APDGTEIAFAVDVDPTGTRPNV 252

Query: 283 DIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNG 335
           D++   +  +    LT  N    + S  YSPD   + F+  R         +L +     
Sbjct: 253 DLFVAGIDGSNPRNLTADNPDGSDGSPLYSPDGRWLAFQQQRVYGFYGANAKLMLYDRRA 312

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
              + +++D + S    VW+P    +           I     DG   + +    + 
Sbjct: 313 GKTRGLTEDWDRSASGIVWAPDSKALYGAIDDAATRRIYRFAVDGGTPKPVTAGRDF 369


>gi|94969246|ref|YP_591294.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551296|gb|ABF41220.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 862

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 101/268 (37%), Gaps = 14/268 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTP---SRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +    G    ++  +  DG N+  + P   S         ++P+ +   + +        
Sbjct: 487 DRQDRGDTPPTVWEVGLDGTNLHRVFPGFTSPPDFECCGGWTPDGKFYVFESGGQLWTAP 546

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
              +  R    P +I +    + +  F   GK+  +            +   + + + L 
Sbjct: 547 PSKLFQRTPPKPVQITSSPIALSSHAFDKAGKKLYVVGSTRRGE---LMRWDAKSRQFLP 603

Query: 299 NTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
               I+   A++S D   + +    +G   L+  +++GSD+ +++ D E +   P WSP 
Sbjct: 604 ILGGISAEFAAFSKDGQWVAYVEFPQGN--LWRSRTDGSDRLQLTYDGEYAMM-PQWSPD 660

Query: 358 GDLIAF-TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           G  I F    +G+   +  +   G   R ++     N Q P +SP G  ++F     G  
Sbjct: 661 GQTIVFFESPAGKLGHMFEVSVSGGAPRQILPGATKNQQDPNYSPDGSKIMFG-GASGLP 719

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQW 442
            S +  +D+  R  T +        P+W
Sbjct: 720 DSTIQILDVKTRQVTTLPGSEGLFSPRW 747



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 99/305 (32%), Gaps = 65/305 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L +    G + R L    D +     +S +  ++ ++   D        +  R     ++
Sbjct: 413 LWIAATLGGSPRPL---GDYVAQAANWSSDGNRIVFSNLGD------IFVGDRSGAPARK 463

Query: 253 IGNFRSMILA-PRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERL----TNTLFINI 305
           + +  + +L+   FS +G+      Q        ++ V L      R+    T+      
Sbjct: 464 VASVGAAVLSNMIFSPDGRSLRFDRQDRGDTPPTVWEVGLDGTNLHRVFPGFTSPPDFEC 523

Query: 306 SASYSPDSSQIVFES-----------------------------------DREGKEQLYV 330
              ++PD    VFES                                   D+ GK+   V
Sbjct: 524 CGGWTPDGKFYVFESGGQLWTAPPSKLFQRTPPKPVQITSSPIALSSHAFDKAGKKLYVV 583

Query: 331 --------MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                   M+ +   ++ +      S     +S  G  +A+ +F      +   + DGS 
Sbjct: 584 GSTRRGELMRWDAKSRQFLPILGGISAEFAAFSKDGQWVAYVEFPQGN--LWRSRTDGSD 641

Query: 383 ERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA--YASD 439
              L  D      P WSP G++++F     G  G  ++ + ++G     I   A     D
Sbjct: 642 RLQLTYDGEYAMMPQWSPDGQTIVFFESPAGKLG-HMFEVSVSGGAPRQILPGATKNQQD 700

Query: 440 PQWVG 444
           P +  
Sbjct: 701 PNYSP 705



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 82/230 (35%), Gaps = 32/230 (13%)

Query: 227 AYATYDDEDILRV--YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           A+       I RV  Y+  TR  R    +              +G R L+    +++  +
Sbjct: 320 AWIANRTSSIPRVSNYVQLTRDGRPKSLVAV------------DGSRLLMIAAFEDSQGM 367

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRIS 342
             + +      +  +     +  + SPD+SQ++            L++  + G   + + 
Sbjct: 368 GEMSINGGEPRKTVSLPGDFVGIALSPDASQLIAIRRAPSAVAAPLWIAATLGGSPRPL- 426

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPS 400
              +       WS  G+ I F+        I V  + G+  R +            +SP 
Sbjct: 427 --GDYVAQAANWSSDGNRIVFSNLGD----IFVGDRSGAPARKVASVGAAVLSNMIFSPD 480

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ------WVG 444
           GRSL F R+  GDT   ++ + L+G N   +  P + S P       W  
Sbjct: 481 GRSLRFDRQDRGDTPPTVWEVGLDGTNLHRV-FPGFTSPPDFECCGGWTP 529



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 83/279 (29%), Gaps = 62/279 (22%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  ++         +     +   +  +P+ +G++  +  A  +SS+G R + S  
Sbjct: 391 ALSPDASQLIAIRRAPSAVAAPLWIAATLGGSPRPLGDY--VAQAANWSSDGNRIVFS-- 446

Query: 278 KDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGK--EQLYVMQSN 334
                DI+  D       ++ +    +  +  +SPD   + F+    G     ++ +  +
Sbjct: 447 --NLGDIFVGDRSGAPARKVASVGAAVLSNMIFSPDGRSLRFDRQDRGDTPPTVWEVGLD 504

Query: 335 GSDQKRISQD---KEASYFDPVWSPQGDLIAFTK-------------------------- 365
           G++  R+               W+P G    F                            
Sbjct: 505 GTNLHRVFPGFTSPPDFECCGGWTPDGKFYVFESGGQLWTAPPSKLFQRTPPKPVQITSS 564

Query: 366 --------FSGEKFAIGVM-----------KKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                   F      + V+                Q   ++   + +   +S  G+ + +
Sbjct: 565 PIALSSHAFDKAGKKLYVVGSTRRGELMRWDAKSRQFLPILGGISAEFAAFSKDGQWVAY 624

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVG 444
                G     L+    +G +   +     YA  PQW  
Sbjct: 625 VEFPQG----NLWRSRTDGSDRLQLTYDGEYAMMPQWSP 659



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 63/199 (31%), Gaps = 11/199 (5%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + +L     DG++ R       +    P++SP+ Q + +       +  ++ +       
Sbjct: 629 QGNLWRSRTDGSD-RLQLTYDGEYAMMPQWSPDGQTIVFFESPAGKLGHMFEVSVSGGAP 687

Query: 250 PKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            + +         P +S +G + +           I  +D+++     L  +  +  S  
Sbjct: 688 RQILPGATKNQQDPNYSPDGSKIMFGGASGLPDSTIQILDVKTRQVTTLPGSEGL-FSPR 746

Query: 309 YSPDSSQ-IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +  D         D     ++ V        K I+     +      S     +      
Sbjct: 747 WCADGRHIPALSGD---FTRVAVYDMQTQKWKDIA---SGNLGWLNCSKDSQYVYMLSTD 800

Query: 368 GEKFAIGVMKK-DGSQERL 385
            +  +I  +   DG +E++
Sbjct: 801 QKGGSIDRVSLKDGKREQV 819


>gi|281410775|gb|ADA68801.1| HET-E [Podospora anserina]
          Length = 462

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 87/266 (32%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      +  
Sbjct: 144 QRVASGSGDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQRVASGSGDK----TIKT 199

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 200 WDTASGTCTQTLEGHGGSVWSVAFSPDGQRVA-SGSDDKTIKIW--DTASGTCTQTLEGH 256

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S  +SPD  ++   SD      + +  +      +  +    S +   +SP G  
Sbjct: 257 GGWVQSVVFSPDGQRVASGSD---DHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQR 313

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A     G    I +           +E     + +  +SP G+ +        D   K+
Sbjct: 314 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSD---DHTIKI 367

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 368 WDAVSGTCTQTLEGHGGWVQSVAFSP 393



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 87/266 (32%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA       D   + +
Sbjct: 18  QRVASGSNDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVA----PGSDDKTIKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 74  WDAASGTCTQTLEGHGGRVQSVAFSPDGQRVA-SGSDDHTIKIW--DAASGTCTQTLEGH 130

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  
Sbjct: 131 GSSVLSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A          I             +E    ++ +  +SP G+ +        D   K+
Sbjct: 188 VA---SGSGDKTIKTWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSD---DKTIKI 241

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 242 WDTASGTCTQTLEGHGGWVQSVVFSP 267



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 87/266 (32%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG   +++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 102 QRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDK----TIKI 157

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +    + + +  FS +G+R            I + D  S    + L   
Sbjct: 158 WDTASGTCTQTLEGHGNSVWSVAFSPDGQRVA---SGSGDKTIKTWDTASGTCTQTLEGH 214

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   SD    + + +  +      +  +         V+SP G  
Sbjct: 215 GGSVWSVAFSPDGQRVASGSD---DKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQR 271

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A      +   I +           +E       +  +SP G+ +  S   DG    K+
Sbjct: 272 VA---SGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSIDGT--IKI 325

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 326 WDAASGTCTQTLEGHGGWVHSVAFSP 351



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 77/225 (34%), Gaps = 12/225 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 228 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDH----TIKI 283

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 284 WDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSIDGTIKIW--DAASGTCTQTLEGH 340

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   SD      + +  +      +  +          +SP G  
Sbjct: 341 GGWVHSVAFSPDGQRVASGSD---DHTIKIWDAVSGTCTQTLEGHGGWVQSVAFSPDGQR 397

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +A +  S +   I         + L      +Q+  +SP G+ + 
Sbjct: 398 VA-SGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVA 441



 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++   D                ++   FSP+ Q+VA  + D      + +
Sbjct: 186 QRVASGSGDKTIKTWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDK----TIKI 241

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 242 WDTASGTCTQTLEGHGGWVQSVVFSPDGQRVA-SGSDDHTIKIW--DAVSGTCTQTLEGH 298

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S       + +  +      +  +          +SP G  
Sbjct: 299 GDSVWSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQR 355

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A      +   I +           +E     +Q+  +SP G+ +        D   K+
Sbjct: 356 VA---SGSDDHTIKIWDAVSGTCTQTLEGHGGWVQSVAFSPDGQRVA---SGSSDKTIKI 409

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 410 WDTASGTCTQTLEGHGGWVQSVAFSP 435



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 19/241 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ Q+VA  + D      + + DT      + +      + +  FS
Sbjct: 1   LEGHGSSVLSVAFSPDGQRVASGSNDK----TIKIWDTASGTGTQTLEGHGGSVWSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
            +G+R       D+ + I+  D  S    + L        S ++SPD  ++   SD    
Sbjct: 57  PDGQRVA-PGSDDKTIKIW--DAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSD---D 110

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +  +      +  +   +S     +SP G  +A          I +          
Sbjct: 111 HTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA---SGSGDKTIKIWDTASGTCTQ 167

Query: 386 LVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +E       +  +SP G+ +       GD   K +        +TL           + 
Sbjct: 168 TLEGHGNSVWSVAFSPDGQRVA---SGSGDKTIKTWDTASGTCTQTLEGHGGSVWSVAFS 224

Query: 444 G 444
            
Sbjct: 225 P 225



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 16/220 (7%)

Query: 170 KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G +   ++F    + V SG   +++ + D                ++   FSP+ Q+VA
Sbjct: 256 HGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA 315

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D      + + D       + +      + +  FS +G+R   S   D  + I+  
Sbjct: 316 SGSIDG----TIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSDDHTIKIW-- 368

Query: 288 DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D  S    + L        S ++SPD  ++   S     + + +  +      +  +   
Sbjct: 369 DAVSGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS---DKTIKIWDTASGTCTQTLEGHG 425

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                  +SP G  +A          I +           
Sbjct: 426 GWVQSVAFSPDGQRVASGSSDNT---IKIWDTASGTCTQT 462



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 79/244 (32%), Gaps = 30/244 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDR---KQIIG-----KKFFSSPASWRKIA----HTIS--DDI 162
            +          ++WD       + + G     +    SP   R  +    HTI   D +
Sbjct: 228 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAV 287

Query: 163 YQSITGEKGDFNSRILFVS-----ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
             + T         +  V+     + V SG I  ++ + D                +   
Sbjct: 288 SGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSV 347

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q+VA  + D      + + D       + +      + +  FS +G+R   S  
Sbjct: 348 AFSPDGQRVASGSDDH----TIKIWDAVSGTCTQTLEGHGGWVQSVAFSPDGQRVA-SGS 402

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D+ + I+  D  S    + L        S ++SPD  ++   S       + +  +   
Sbjct: 403 SDKTIKIW--DTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS---DNTIKIWDTASG 457

Query: 337 DQKR 340
              +
Sbjct: 458 TCTQ 461


>gi|269928432|ref|YP_003320753.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269787789|gb|ACZ39931.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 649

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 79/238 (33%), Gaps = 43/238 (18%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFI 303
           P+ +    +M   P+ S +G + L ++       K  +  I+   +  +   RLT +   
Sbjct: 7   PELVVYGLTMAGEPQVSPDGTQILYTLSAVDRETKKGSSQIWLCGIDGSNPRRLTWSGER 66

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N    +SPD  +I F S+R  K  ++V+  +   + R       +  D  WSP G  IA+
Sbjct: 67  NSGGVWSPDGRRIAFVSNRVEKAGIFVLDLDRPGEAREITRHNQAISDLAWSPDGTRIAY 126

Query: 364 TK-----------------------------------FSGEKFAIGVMKKDGSQERLLVE 388
           T                                     +  +F   V+  +  + R L  
Sbjct: 127 TTTFDPENPDETPPDKDAPPKVRVTRRIDYKQDGRGYLNDVRFHTFVVDVETGERRRLSR 186

Query: 389 DSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
           +      P WSP GR +           S L  + ++G  E  I           W  
Sbjct: 187 ELRDHLFPQWSPDGRFVSVRVPILNGMCSYLALLPVDGGEEIRIGPETGVISVWAWSP 244



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 99/259 (38%), Gaps = 17/259 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             +    + + +   DG+N R LT S ++      +SP+ +++A+ +   E    ++++D
Sbjct: 38  RETKKGSSQIWLCGIDGSNPRRLTWSGERNSGG-VWSPDGRRIAFVSNRVEKA-GIFVLD 95

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLF 302
                  + I      I    +S +G R   +   D E  D    D  +    R+T    
Sbjct: 96  LDRPGEAREITRHNQAISDLAWSPDGTRIAYTTTFDPENPDETPPDKDAPPKVRVTRR-- 153

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I+    Y  D    +     + +   +V+     +++R    +   +  P WSP G  ++
Sbjct: 154 ID----YKQDGRGYL----NDVRFHTFVVDVETGERRR-LSRELRDHLFPQWSPDGRFVS 204

Query: 363 FTK--FSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                 +G    + ++  DG +E R+  E   +    WSPSG  +I++   +       +
Sbjct: 205 VRVPILNGMCSYLALLPVDGGEEIRIGPETGVISVWAWSPSGDRIIYAGDTEHSFQDDFF 264

Query: 420 SIDLNGRNETLINTPAYAS 438
             D+     T +      S
Sbjct: 265 VYDVASGTTTRLTDDLDVS 283


>gi|83945181|ref|ZP_00957530.1| Acylaminoacyl-peptidase [Oceanicaulis alexandrii HTCC2633]
 gi|83851351|gb|EAP89207.1| Acylaminoacyl-peptidase [Oceanicaulis alexandrii HTCC2633]
          Length = 687

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 91/293 (31%), Gaps = 56/293 (19%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDR 248
           L     +G  ++       ++  +P+ SPN + VAY    ++                  
Sbjct: 19  LAASQAEGGPLQAADIFSLEMARDPQISPNGRWVAYQRRSNDIMTDQTRSAIWTAPYEGG 78

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           A + +        +PR+S +  + +    ++    +  V + +  +  L        + S
Sbjct: 79  ANRPLVTGSGDYSSPRWSPDSSQIVFIANENGESLLKKVWVDNGRSATLAQLPGGAGNLS 138

Query: 309 YSPDSSQIVFESDR-----------------------------------------EGKEQ 327
           +SPD   I F                                              G  Q
Sbjct: 139 WSPDGRWIAFTMFMPTPEPQVDIGMPDKPRGAEWAAPALVDETTRYEFDGAGELPSGYSQ 198

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFSGEKFAIGVMKKDG 380
           ++V  ++G   ++++   + S     W P    + ++        F   +  I  +  D 
Sbjct: 199 IFVAPADGGAPRQLTHVTDGSISGVSWGPDSQRLYYSLGGREADDFDFREADIYAIALDA 258

Query: 381 SQERLLVE-DSNLQAPTWSPSGRSLIFS---RKKDGDTGSKLYSIDLNGRNET 429
           S    + +      +P  SP G  L +    R+++ +  + L  + L+G    
Sbjct: 259 SDPVQITDFPGGESSPRISPDGEMLAYLSTPRREESNVDNDLKVMSLSGGEPR 311



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 14/109 (12%)

Query: 350 FDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGR 402
            DP  SP G  +A+ + S +      + AI     +G   R L+    +  +P WSP   
Sbjct: 41  RDPQISPNGRWVAYQRRSNDIMTDQTRSAIWTAPYEGGANRPLVTGSGDYSSPRWSPDSS 100

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA------YASDPQWVGF 445
            ++F   ++G++  K   +D NGR+ TL   P       ++ D +W+ F
Sbjct: 101 QIVFIANENGESLLKKVWVD-NGRSATLAQLPGGAGNLSWSPDGRWIAF 148



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 72/227 (31%), Gaps = 52/227 (22%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYL------------------------------------ 241
            +SP+ + +A+  +      +V +                                    
Sbjct: 138 SWSPDGRWIAFTMFMPTPEPQVDIGMPDKPRGAEWAAPALVDETTRYEFDGAGELPSGYS 197

Query: 242 ---MDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQ 290
              +      AP+++ +     I    +  + +R   S+   EA        DIY++ L 
Sbjct: 198 QIFVAPADGGAPRQLTHVTDGSISGVSWGPDSQRLYYSLGGREADDFDFREADIYAIALD 257

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDK 345
           ++   ++T+      S   SPD   + + S            L VM  +G + + +  D 
Sbjct: 258 ASDPVQITDFPGGESSPRISPDGEMLAYLSTPRREESNVDNDLKVMSLSGGEPRELLADL 317

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +  +    W  +G  +  +        +G    +G  +R+  +   +
Sbjct: 318 DRGFNQAEWDERGRGLWVSFDDRGHTVLGYAGLNGGLDRIRDDLGGM 364



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 78/249 (31%), Gaps = 34/249 (13%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE------DILRVYLMDT 244
           + + V   DG   R LT   D  +    + P+ Q++ Y+    E          +Y +  
Sbjct: 197 SQIFVAPADGGAPRQLTHVTDGSISGVSWGPDSQRLYYSLGGREADDFDFREADIYAIAL 256

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTN 299
                P +I +F     +PR S +G+             +   D+  + L       L  
Sbjct: 257 DASD-PVQITDFPGGESSPRISPDGEMLAYLSTPRREESNVDNDLKVMSLSGGEPRELLA 315

Query: 300 TLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGS------DQKRISQDKEASYFDP 352
            L    + A +      +    D  G   L     NG       D   ++  +  +    
Sbjct: 316 DLDRGFNQAEWDERGRGLWVSFDDRGHTVLGYAGLNGGLDRIRDDLGGMTFGRPYTSGAF 375

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL---------LVEDSNLQAPTW--SPSG 401
             S      A    + +   +GV  + G   RL         L + + ++  TW  S  G
Sbjct: 376 SVSGNDRWAATLASAYDLANVGVGTRRGLANRLTDVNADVLGLRDLAEVERFTWASSADG 435

Query: 402 R----SLIF 406
           +     + +
Sbjct: 436 QEIEGWIAY 444



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 10/96 (10%)

Query: 359 DLIAFTKFS---GEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDG- 412
           + I F   +       A+   + +G   +   +      + P  SP+GR + + R+ +  
Sbjct: 2   NRILFASLALAMASPSALAASQAEGGPLQAADIFSLEMARDPQISPNGRWVAYQRRSNDI 61

Query: 413 ---DTGSKLYSIDLNG-RNETLINTPAYASDPQWVG 444
               T S +++    G  N  L+      S P+W  
Sbjct: 62  MTDQTRSAIWTAPYEGGANRPLVTGSGDYSSPRWSP 97


>gi|160890339|ref|ZP_02071342.1| hypothetical protein BACUNI_02780 [Bacteroides uniformis ATCC 8492]
 gi|156860071|gb|EDO53502.1| hypothetical protein BACUNI_02780 [Bacteroides uniformis ATCC 8492]
          Length = 707

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 115/308 (37%), Gaps = 67/308 (21%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV      + + VM+ DG++   +T    Q   +P +  + +K+A+   +     +V+ 
Sbjct: 76  YSVPQNKSNSEVFVMNADGSDNTQITHDAWQ-EGQPTWFKDGKKLAFLCNESGSS-QVWE 133

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------------------------ 277
           M+       K++  +   I    FS +GK+ L   Q                        
Sbjct: 134 MNPD-GSGRKQLTQYEGDIEGFSFSPDGKKLLFIAQVKTVKSTADKHPDLPKATGIIVTD 192

Query: 278 ---------KDEAMDIYSVDLQSNATERLTN-------------TLFINISASYSPDSSQ 315
                       A   +  D   NA   +T+                I    ++SP S +
Sbjct: 193 LMYKHWDEWVTTAPHPFVADFDGNAISNVTDILEGEPYESPMKPWGGIE-QLAWSPSSDK 251

Query: 316 IVFE-SDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + +    + G          +Y+      + K I+++ +    +P +SP G  IA+    
Sbjct: 252 VAYTCRKKTGLAYAISTNSDIYIYDLASKETKNITEENKGYDTNPQYSPDGKYIAWQSME 311

Query: 368 GEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            + +      + +M  +  ++R + +  +SN+ A  W+   RS+ F     G+T  ++Y+
Sbjct: 312 RDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFLWNKDSRSIYFIGVWHGET--QIYN 369

Query: 421 IDLNGRNE 428
           IDL G ++
Sbjct: 370 IDLVGNDK 377



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 93/277 (33%), Gaps = 63/277 (22%)

Query: 218 RFSPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+++++AY          +    V++M+       + I +       P +  +GK+ 
Sbjct: 61  AVSPDEKQIAYTVSYYSVPQNKSNSEVFVMNADGSDNTQ-ITHDAWQEGQPTWFKDGKKL 119

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
                +  +  ++ ++   +  ++LT         S+SPD  +++F +            
Sbjct: 120 AFLCNESGSSQVWEMNPDGSGRKQLTQYEGDIEGFSFSPDGKKLLFIAQVKTVKSTADKH 179

Query: 322 ----------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDP------- 352
                                        +V   +G+    ++   E   ++        
Sbjct: 180 PDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNAISNVTDILEGEPYESPMKPWGG 239

Query: 353 ----VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWS 398
                WSP  D +A+T                I +      + + + E+       P +S
Sbjct: 240 IEQLAWSPSSDKVAYTCRKKTGLAYAISTNSDIYIYDLASKETKNITEENKGYDTNPQYS 299

Query: 399 PSGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLIN 432
           P G+ + + S ++DG     ++L+ ++L    +  ++
Sbjct: 300 PDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVS 336



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 82/247 (33%), Gaps = 61/247 (24%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I +   S + K+   +V      Q     +++ ++   +   ++T+  +     ++  
Sbjct: 55  GRIGSVAVSPDEKQIAYTVSYYSVPQNKSNSEVFVMNADGSDNTQITHDAWQEGQPTWFK 114

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--- 368
           D  ++ F  +  G  Q++ M  +GS +K+++Q  E       +SP G  + F        
Sbjct: 115 DGKKLAFLCNESGSSQVWEMNPDGSGRKQLTQY-EGDIEGFSFSPDGKKLLFIAQVKTVK 173

Query: 369 ------------------------------EKFAIGVMKKDGSQERLLVE---DSNLQAP 395
                                               V   DG+    + +       ++P
Sbjct: 174 STADKHPDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNAISNVTDILEGEPYESP 233

Query: 396 ----------TWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLIN--TPAYA 437
                      WSPS   + ++ RKK G      T S +Y  DL  +    I      Y 
Sbjct: 234 MKPWGGIEQLAWSPSSDKVAYTCRKKTGLAYAISTNSDIYIYDLASKETKNITEENKGYD 293

Query: 438 SDPQWVG 444
           ++PQ+  
Sbjct: 294 TNPQYSP 300



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 104/294 (35%), Gaps = 59/294 (20%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------DD 233
           +    + +  M+ DG+  + LT     I     FSP+ +K+ +               D 
Sbjct: 124 NESGSSQVWEMNPDGSGRKQLTQYEGDIEGF-SFSPDGKKLLFIAQVKTVKSTADKHPDL 182

Query: 234 EDILRVYLMDTRIDRAPKRIG--------NFRSMILA----------------P------ 263
                + + D       + +         +F    ++                P      
Sbjct: 183 PKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNAISNVTDILEGEPYESPMKPWGGIEQ 242

Query: 264 -RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLFINISASYSPDS 313
             +S +  +   + +K            DIY  DL S  T+ +T      + +  YSPD 
Sbjct: 243 LAWSPSSDKVAYTCRKKTGLAYAISTNSDIYIYDLASKETKNITEENKGYDTNPQYSPDG 302

Query: 314 SQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             I ++S +R+G      +L++M     +++ +S+  E++    +W+     I F     
Sbjct: 303 KYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFLWNKDSRSIYFIGVWH 362

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +  I  +   G+ +   + D      + +  G  +I +++     G ++Y+++
Sbjct: 363 GETQIYNIDLVGNDKLTQLTDGMHDYASLALCGNKII-AKRHSMSMGDEIYAVN 415


>gi|85710982|ref|ZP_01042043.1| Acylaminoacyl-peptidase [Idiomarina baltica OS145]
 gi|85695386|gb|EAQ33323.1| Acylaminoacyl-peptidase [Idiomarina baltica OS145]
          Length = 679

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 105/310 (33%), Gaps = 40/310 (12%)

Query: 160 DDIY--QSITGEKGDFNSR-ILFVSESVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQILF 215
           DDI+  +         + R I ++              V   D A N  Y          
Sbjct: 30  DDIFQLEYANDVSISPDGRYIAYIRNRFNDMKDNTERSVWILDTASNQHYPLFDEGDAYG 89

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              +SP+ Q++A  + + +D  +V++     D+  + I +         +S +G+     
Sbjct: 90  NLTWSPDSQRLALTS-NRKDSYQVHVYWLNQDKHAE-ITHVHESPSQLAWSPDGESIAFL 147

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-----FESDREG-----K 325
           +        +         +R T     +           IV     ++SD +G      
Sbjct: 148 MDVPAEKTAFE-----KKVKRPTKPEGADWG------GQPIVVQEAYYQSDGQGVLKPAH 196

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-------AIGVMKK 378
            QL+ + + G   ++++    +      WS  G+ I F+    + +        +  +  
Sbjct: 197 AQLFTVPATGGSVQQLTTGAFSHSGPLTWSHDGESIVFSANRDKDWAYEVNDSDLYAVNV 256

Query: 379 DGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD---TGSKLYSIDLNGRNETLINT- 433
              Q   + +      AP +SP G  L++    D        +L+ +D + + +  + + 
Sbjct: 257 KTQQLTRITQAAGQEYAPQFSPDGERLVYLHSSDEPVPYHKGELWVMDWSSKQKRELQSE 316

Query: 434 -PAYASDPQW 442
                ++PQW
Sbjct: 317 LDRSFANPQW 326



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 88/233 (37%), Gaps = 28/233 (12%)

Query: 227 AYATYDDEDILRVYLMDT----RIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEA 281
           AY   D + +L+              + +++         P  +S +G+  + S  +D+ 
Sbjct: 182 AYYQSDGQGVLKPAHAQLFTVPATGGSVQQLTTGAFSHSGPLTWSHDGESIVFSANRDKD 241

Query: 282 M-------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--ESDRE---GKEQLY 329
                   D+Y+V++++    R+T       +  +SPD  ++V+   SD      K +L+
Sbjct: 242 WAYEVNDSDLYAVNVKTQQLTRITQAAGQEYAPQFSPDGERLVYLHSSDEPVPYHKGELW 301

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL---- 385
           VM  +   ++ +  + + S+ +P W+   D IA       K  I  +  D    R     
Sbjct: 302 VMDWSSKQKRELQSELDRSFANPQWNA-ADTIAVQFADRGKTVIANVSLDDELTRRADDV 360

Query: 386 ----LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               +     + + + S +G ++ +++          Y    +   +TL    
Sbjct: 361 SGTYVSRPYTMGSFSASNNG-AIAYTQGTPYRPADVGYQASGD-ETQTLTQLN 411



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 80/223 (35%), Gaps = 19/223 (8%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR---- 238
             V       L  +   G +++ LT           +S + + + ++   D+D       
Sbjct: 189 QGVLKPAHAQLFTVPATGGSVQQLTTGAFSHSGPLTWSHDGESIVFSANRDKDWAYEVND 248

Query: 239 --VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-----AMDIYSVDLQS 291
             +Y ++ +  +   RI        AP+FS +G+R +     DE       +++ +D  S
Sbjct: 249 SDLYAVNVKTQQLT-RITQAAGQEYAPQFSPDGERLVYLHSSDEPVPYHKGELWVMDWSS 307

Query: 292 NATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDK 345
                L + L  +  +  ++   +  V  +DR GK  +  +  +    +R      +   
Sbjct: 308 KQKRELQSELDRSFANPQWNAADTIAVQFADR-GKTVIANVSLDDELTRRADDVSGTYVS 366

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                    +     IA+T+ +  + A    +  G + + L +
Sbjct: 367 RPYTMGSFSASNNGAIAYTQGTPYRPADVGYQASGDETQTLTQ 409



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 8/102 (7%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQAP-TWSPSGR 402
            D   SP G  IA+ +             + ++    +Q   L ++ +     TWSP  +
Sbjct: 39  NDVSISPDGRYIAYIRNRFNDMKDNTERSVWILDTASNQHYPLFDEGDAYGNLTWSPDSQ 98

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            L  +  +       +Y ++ + ++  + +     S   W  
Sbjct: 99  RLALTSNRKDSYQVHVYWLNQD-KHAEITHVHESPSQLAWSP 139


>gi|197120542|ref|YP_002132493.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Anaeromyxobacter sp. K]
 gi|196170391|gb|ACG71364.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Anaeromyxobacter sp. K]
          Length = 674

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 87/244 (35%), Gaps = 33/244 (13%)

Query: 220 SPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+   VAY     +   E ++    +      A +R+      + AP FS +G+R    
Sbjct: 35  SPDGASVAYTVATSSPGGEKLVSALHLVPAAGGAARRLTFAEERVTAPAFSPDGRRLAFL 94

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +      + +DLQ     R+T+         ++PD + ++  SD +         + G
Sbjct: 95  SNRKGGTQAWVLDLQGGEARRVTDLPGGVSELRFTPDGAALLVASDVD--------PACG 146

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV----MKKDGSQERLLVEDSN 391
           +D     +   A+   P  +   D + F  ++  +  +      +  DG     L     
Sbjct: 147 ADAACNRKADAAAEVRPHLA---DRLLFRHWNEWRERVRTHLLRVPLDGGPAVDLTPGDR 203

Query: 392 LQAP---------TWSPSGRSLIFSRKKDG----DTGSKLYSIDLNGRNETLINT-PAYA 437
              P          +SP G++L +    D      T   +Y++ L G     + T P + 
Sbjct: 204 DAPPVQRGSGDDLAFSPDGKTLYYVAVSDPVEATSTNGDVYAVPLAGGTPRRVTTAPGWD 263

Query: 438 SDPQ 441
             P+
Sbjct: 264 GSPR 267



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 58/321 (18%), Positives = 115/321 (35%), Gaps = 66/321 (20%)

Query: 170 KGDFNSRILFVSESVVSG-IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             D  S    V+ S   G  + ++L ++   G   R LT + +++   P FSP+ +++A+
Sbjct: 35  SPDGASVAYTVATSSPGGEKLVSALHLVPAAGGAARRLTFAEERVT-APAFSPDGRRLAF 93

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA------- 281
            + + +   + +++D +     +R+ +    +   RF+ +G   L++   D A       
Sbjct: 94  LS-NRKGGTQAWVLDLQ-GGEARRVTDLPGGVSELRFTPDGAALLVASDVDPACGADAAC 151

Query: 282 -------------------------------MDIYSVDLQSNATERLTNT--------LF 302
                                            +  V L       LT            
Sbjct: 152 NRKADAAAEVRPHLADRLLFRHWNEWRERVRTHLLRVPLDGGPAVDLTPGDRDAPPVQRG 211

Query: 303 INISASYSPDSSQIVF--ESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                ++SPD   + +   SD          +Y +   G   +R++         P  SP
Sbjct: 212 SGDDLAFSPDGKTLYYVAVSDPVEATSTNGDVYAVPLAGGTPRRVTT-APGWDGSPRPSP 270

Query: 357 QGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRK 409
            G  +A+       +  ++F + V   DGS  R L    +  A    W+  G++L F+ +
Sbjct: 271 DGKRLAWLAQPRAGYEADRFHVMVAAADGSGARDLTAGFDRSAADLEWARGGKALRFTAE 330

Query: 410 KDGDTGSKLYSIDLNGRNETL 430
            +G     +Y +DL G+   L
Sbjct: 331 SEG--VHAVYEVDLAGKVTEL 349



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 59/153 (38%), Gaps = 12/153 (7%)

Query: 264 RFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            FS +GK        D         D+Y+V L      R+T     + S   SPD  ++ 
Sbjct: 217 AFSPDGKTLYYVAVSDPVEATSTNGDVYAVPLAGGTPRRVTTAPGWDGSPRPSPDGKRLA 276

Query: 318 FESD-REG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           + +  R G    +  + V  ++GS  + ++   + S  D  W+  G  + FT  S    A
Sbjct: 277 WLAQPRAGYEADRFHVMVAAADGSGARDLTAGFDRSAADLEWARGGKALRFTAESEGVHA 336

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +  +   G +   L    NL   +WS  G  L 
Sbjct: 337 VYEVDLAG-KVTELYRGRNLARVSWSRDGARLA 368



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 88/300 (29%), Gaps = 39/300 (13%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           RV         + F      D   ++               +  +D   +     +    
Sbjct: 115 RVTDLPGGVSELRF----TPDGAALLVASDVDPACGADAACNRKADAAAE----VRPHLA 166

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP---------RFSPNQQK 225
            R+LF   +     ++  L  +  DG     LTP        P          FSP+ + 
Sbjct: 167 DRLLFRHWNEWRERVRTHLLRVPLDGGPAVDLTPG--DRDAPPVQRGSGDDLAFSPDGKT 224

Query: 226 VAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-- 279
           + Y    D         D          P+R+        +PR S +GKR     Q    
Sbjct: 225 LYYVAVSDPVEATSTNGDVYAVPLAGGTPRRVTTAPGWDGSPRPSPDGKRLAWLAQPRAG 284

Query: 280 ---EAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQS 333
              +   +       +    LT     + SA+   ++     + F ++ EG   +Y +  
Sbjct: 285 YEADRFHVMVAAADGSGARDLT--AGFDRSAADLEWARGGKALRFTAESEGVHAVYEVDL 342

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKD--GSQERLLVEDS 390
            G   +     +  +     WS  G  + A          + V++    G+Q RLL    
Sbjct: 343 AGKVTEL---YRGRNLARVSWSRDGARLAALVDGLAAPPEVAVLEPGARGAQPRLLTGFG 399



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 8/113 (7%)

Query: 306 SASYSPDSSQIVF---ESDREGK---EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            AS SPD + + +    S   G+     L+++ + G   +R++  +E     P +SP G 
Sbjct: 31  DASLSPDGASVAYTVATSSPGGEKLVSALHLVPAAGGAARRLTFAEER-VTAPAFSPDGR 89

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD 411
            +AF           V+   G + R + +    +    ++P G +L+ +   D
Sbjct: 90  RLAFLSNRKGGTQAWVLDLQGGEARRVTDLPGGVSELRFTPDGAALLVASDVD 142


>gi|157374240|ref|YP_001472840.1| transcriptional regulator domain-containing protein [Shewanella
           sediminis HAW-EB3]
 gi|157316614|gb|ABV35712.1| transcriptional regulator domain protein [Shewanella sediminis
           HAW-EB3]
          Length = 713

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 51/277 (18%), Positives = 93/277 (33%), Gaps = 53/277 (19%)

Query: 219 FSPNQQKVAYATYDDEDI---LRVYLMDTRIDR-APKRIG---NFRSMILAPRFSSNGKR 271
            S + + + Y   + E       +YL+D      AP R+    +         FS +GK 
Sbjct: 281 ISADGRSLIYIWKEKEREELDAGLYLLDLLSAELAPLRLSCERDCGYRDRDVAFSPDGKW 340

Query: 272 ALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             I+ +    + DI+  ++ +    RLT  L      S+  DS ++VF ++  G    ++
Sbjct: 341 IAIARRYGTISEDIFIRNIVTGDEVRLTQGLEDIRGLSWDQDSQKLVFSTENSGFRDGFI 400

Query: 331 MQSNGSDQKRISQDK-------------------------------------------EA 347
           +     +   +S                                              E 
Sbjct: 401 VDIESKEMLPLSISGFSYPKFIPHRDEVVYSNYIKDFSVAYLALDQDIPSTVFPISQAEY 460

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
           SY +P +S +   IA+         I     +G     L +    +  P WS  G  + F
Sbjct: 461 SYRNPDYSSKAKRIAYVSNETGFNEIWTSDHNGLNRVQLTDLKRRVAYPAWSHDGSKIAF 520

Query: 407 SRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQW 442
               D + G+K++ +DL +G    L +  +    P W
Sbjct: 521 LAPDDKNEGNKIHIVDLSSGGISILPSRSSDHRRPSW 557



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 98/258 (37%), Gaps = 23/258 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSM 259
                           P  SP+ + + Y          +YL D       PKR+ + R+ 
Sbjct: 175 QTEMVQLTRAAGAELYPAVSPDGRWLVY-----GKRSNLYLKDLESPTLTPKRLTSKRTR 229

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVD---LQSNATERLTNTLFINISASYSPDSSQI 316
            L   +SS+GK  +    +D       ++   L++N    L+       +   S D   +
Sbjct: 230 ELRAIWSSDGKSLIYP-SEDRVTRECHMNRLMLETNEVSYLSECYSYTSALDISADGRSL 288

Query: 317 VFESDREGKEQ----LYVMQSNGSD--QKRISQDKEASYFDP--VWSPQGDLIAFTKFSG 368
           ++    + +E+    LY++    ++    R+S +++  Y D    +SP G  IA  +  G
Sbjct: 289 IYIWKEKEREELDAGLYLLDLLSAELAPLRLSCERDCGYRDRDVAFSPDGKWIAIARRYG 348

Query: 369 EKFA-IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                I +       E  L +   +++  +W    + L+FS +  G      + +D+  +
Sbjct: 349 TISEDIFIRNIVTGDEVRLTQGLEDIRGLSWDQDSQKLVFSTENSGFRDG--FIVDIESK 406

Query: 427 NETLINTPAYASDPQWVG 444
               ++   + S P+++ 
Sbjct: 407 EMLPLSISGF-SYPKFIP 423



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 84/227 (37%), Gaps = 21/227 (9%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + + P        P+F P++ +V Y+ Y  +  +    +D  I      I         P
Sbjct: 406 KEMLPLSISGFSYPKFIPHRDEVVYSNYIKDFSVAYLALDQDIPSTVFPISQAEYSYRNP 465

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--D 321
            +SS  KR      +    +I++ D       +LT+        ++S D S+I F +  D
Sbjct: 466 DYSSKAKRIAYVSNETGFNEIWTSDHNGLNRVQLTDLKRRVAYPAWSHDGSKIAFLAPDD 525

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVM---K 377
           +    +++++  +      I   + + +  P W+   + +  +   G   F++       
Sbjct: 526 KNEGNKIHIVDLSSGGIS-ILPSRSSDHRRPSWAWGDEWVLSSTNDGLTAFSLHNHSPKH 584

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 RL      +          +L+F+R  +      L+S+D++
Sbjct: 585 LSSIDVRL----GKMT------DANTLVFTRYDE----YGLWSMDIS 617



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 44/336 (13%), Positives = 104/336 (30%), Gaps = 52/336 (15%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK-------FFSSPASWRKIAHTISDDIY 163
           +VTG  ++  +    +    WD   +K +   +       F     S   +  +IS   Y
Sbjct: 359 IVTGDEVRLTQGLEDIRGLSWDQDSQKLVFSTENSGFRDGFIVDIESKEMLPLSISGFSY 418

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                 + +       V  S        +   +D+D  +  +     +     P +S   
Sbjct: 419 PKFIPHRDE-------VVYSNYIKDFSVAYLALDQDIPSTVFPISQAEYSYRNPDYSSKA 471

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--QKDEA 281
           +++AY + +                   ++ + +  +  P +S +G +        K+E 
Sbjct: 472 KRIAYVSNETG--FNEIWTSDHNGLNRVQLTDLKRRVAYPAWSHDGSKIAFLAPDDKNEG 529

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             I+ VDL S     L +    +   S++    + V  S  +G                +
Sbjct: 530 NKIHIVDLSSGGISILPSRSSDHRRPSWAW-GDEWVLSSTNDG----------------L 572

Query: 342 SQDKEASYFDPVWSP---------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +     ++     S            + + FT++       G+   D S  + +     +
Sbjct: 573 TAFSLHNHSPKHLSSIDVRLGKMTDANTLVFTRYD----EYGLWSMDISNPQQVEPLIAI 628

Query: 393 QAPTWSPS----GRSLIFSRKKDGDTGSKLYSIDLN 424
           +  + S +     + + F     G      +S + +
Sbjct: 629 EDFSESYNWVVTDKGVYFREVNAGYQLINFWSFNTD 664



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 62/175 (35%), Gaps = 24/175 (13%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS--DQKRISQDKE 346
           L+     +LT      +  + SPD   +V+      +  LY+          KR++  + 
Sbjct: 173 LRQTEMVQLTRAAGAELYPAVSPDGRWLVY----GKRSNLYLKDLESPTLTPKRLTSKRT 228

Query: 347 ASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRS 403
                 +WS  G  + +        +  +  +  + ++   L E  +  +    S  GRS
Sbjct: 229 RELRA-IWSSDGKSLIYPSEDRVTRECHMNRLMLETNEVSYLSECYSYTSALDISADGRS 287

Query: 404 LIF--SRKKDGDTGSKLYSIDLNGRNETLINTP------------AYASDPQWVG 444
           LI+    K+  +  + LY +DL       +               A++ D +W+ 
Sbjct: 288 LIYIWKEKEREELDAGLYLLDLLSAELAPLRLSCERDCGYRDRDVAFSPDGKWIA 342


>gi|86156543|ref|YP_463328.1| peptidase S9, prolyl oligopeptidase [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85773054|gb|ABC79891.1| peptidase S9, prolyl oligopeptidase [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 674

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 84/246 (34%), Gaps = 33/246 (13%)

Query: 218 RFSPNQQKVAYATY----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+   VAY         E ++    +      A +R+      + +P FS +G+R  
Sbjct: 33  AISPDGASVAYTVATSAPGGEKLVSALHLVPAAGGAARRLTFGEERVSSPAFSPDGRRIA 92

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
               +      + +DLQ     R+T+         ++PD + +V  SD +         +
Sbjct: 93  FLSNRKGGTQAWVLDLQGGEARRVTDLPGGVSELRFTPDGAALVVASDVD--------PA 144

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV----MKKDGSQERLLVED 389
            G+D     +   A+   P  +   D + F  +   +  +      +  DG     L   
Sbjct: 145 CGADAACNRKADAAAEVRPHLA---DRLLFRHWDEWRERVRTHLVRVPLDGGAAVDLTPG 201

Query: 390 SNLQAP---------TWSPSGRSLIFSRKKDG----DTGSKLYSIDLNGRNETLIN-TPA 435
                P          +SP G++L +    D      T   +Y++ L G     +   P 
Sbjct: 202 DRDAPPVQRGSGDDLAFSPDGKTLYYVAVSDPVEATSTNGDVYAVPLAGGTPRRVTIAPG 261

Query: 436 YASDPQ 441
           +   P+
Sbjct: 262 WDGAPR 267



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 58/323 (17%), Positives = 115/323 (35%), Gaps = 66/323 (20%)

Query: 168 GEKGDFNSRILFVSESVVSG-IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
               D  S    V+ S   G  + ++L ++   G   R LT   +++   P FSP+ +++
Sbjct: 33  AISPDGASVAYTVATSAPGGEKLVSALHLVPAAGGAARRLTFGEERV-SSPAFSPDGRRI 91

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA----- 281
           A+ + + +   + +++D +     +R+ +    +   RF+ +G   +++   D A     
Sbjct: 92  AFLS-NRKGGTQAWVLDLQ-GGEARRVTDLPGGVSELRFTPDGAALVVASDVDPACGADA 149

Query: 282 ---------------------------------MDIYSVDLQSNATERLTNT-------- 300
                                              +  V L   A   LT          
Sbjct: 150 ACNRKADAAAEVRPHLADRLLFRHWDEWRERVRTHLVRVPLDGGAAVDLTPGDRDAPPVQ 209

Query: 301 LFINISASYSPDSSQIVF--ESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                  ++SPD   + +   SD          +Y +   G   +R++         P  
Sbjct: 210 RGSGDDLAFSPDGKTLYYVAVSDPVEATSTNGDVYAVPLAGGTPRRVT-IAPGWDGAPRP 268

Query: 355 SPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFS 407
           SP G  +A+       +  +++ + V   DGS  R L    +  A    W+  G++L F+
Sbjct: 269 SPDGKRLAWLAQPRAGYEADRYHVMVAAADGSGARDLTAGFDRSAADLVWARGGKALRFT 328

Query: 408 RKKDGDTGSKLYSIDLNGRNETL 430
            + +G     LY +DL G+   L
Sbjct: 329 AESEG--VHALYEVDLAGKVTEL 349



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 12/153 (7%)

Query: 264 RFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            FS +GK        D         D+Y+V L      R+T     + +   SPD  ++ 
Sbjct: 217 AFSPDGKTLYYVAVSDPVEATSTNGDVYAVPLAGGTPRRVTIAPGWDGAPRPSPDGKRLA 276

Query: 318 FESD-REG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           + +  R G    +  + V  ++GS  + ++   + S  D VW+  G  + FT  S    A
Sbjct: 277 WLAQPRAGYEADRYHVMVAAADGSGARDLTAGFDRSAADLVWARGGKALRFTAESEGVHA 336

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +  +   G +   L    NL   +WS  G  L 
Sbjct: 337 LYEVDLAG-KVTELYRGRNLARVSWSRDGARLA 368



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 8/113 (7%)

Query: 306 SASYSPDSSQIVF---ESDREGK---EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            A+ SPD + + +    S   G+     L+++ + G   +R++  +E     P +SP G 
Sbjct: 31  DAAISPDGASVAYTVATSAPGGEKLVSALHLVPAAGGAARRLTFGEER-VSSPAFSPDGR 89

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD 411
            IAF           V+   G + R + +    +    ++P G +L+ +   D
Sbjct: 90  RIAFLSNRKGGTQAWVLDLQGGEARRVTDLPGGVSELRFTPDGAALVVASDVD 142



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 83/292 (28%), Gaps = 37/292 (12%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           RV         + F      D   ++               +  +D   +     +    
Sbjct: 115 RVTDLPGGVSELRF----TPDGAALVVASDVDPACGADAACNRKADAAAE----VRPHLA 166

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP---------RFSPNQQK 225
            R+LF         ++  L  +  DG     LTP        P          FSP+ + 
Sbjct: 167 DRLLFRHWDEWRERVRTHLVRVPLDGGAAVDLTPG--DRDAPPVQRGSGDDLAFSPDGKT 224

Query: 226 VAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-- 279
           + Y    D         D          P+R+        APR S +GKR     Q    
Sbjct: 225 LYYVAVSDPVEATSTNGDVYAVPLAGGTPRRVTIAPGWDGAPRPSPDGKRLAWLAQPRAG 284

Query: 280 ---EAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQS 333
              +   +       +    LT     + SA+   ++     + F ++ EG   LY +  
Sbjct: 285 YEADRYHVMVAAADGSGARDLT--AGFDRSAADLVWARGGKALRFTAESEGVHALYEVDL 342

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKDGSQER 384
            G   +     +  +     WS  G  + A          + V++  G   +
Sbjct: 343 AGKVTEL---YRGRNLARVSWSRDGARLAALVDGLAAPPEVAVLEPGGRGAQ 391



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 10/98 (10%)

Query: 350 FDPVWSPQGDLIAF---TKFSGEK---FAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGR 402
            D   SP G  +A+   T   G +    A+ ++   G   R L   +  + +P +SP GR
Sbjct: 30  GDAAISPDGASVAYTVATSAPGGEKLVSALHLVPAAGGAARRLTFGEERVSSPAFSPDGR 89

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASD 439
            + F   + G  G++ + +DL G     +   P   S+
Sbjct: 90  RIAFLSNRKG--GTQAWVLDLQGGEARRVTDLPGGVSE 125


>gi|320012853|gb|ADW07703.1| WD40 repeat, subgroup [Streptomyces flavogriseus ATCC 33331]
          Length = 1187

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 65/351 (18%), Positives = 110/351 (31%), Gaps = 39/351 (11%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI-----TG 168
            GR I  G D   V     D  +  Q+IG        +W    H I+              
Sbjct: 801  GRHIAVGDDDCTVRVWDTDTSEESQLIGHTDSVHDIAWH--GHRIATVSRDRTVAIWDAP 858

Query: 169  EKGDFNSRILFVSESVVSGIIK---NSLCVMDRDG--------ANIRYLTPSRDQILFEP 217
             +G     +L   +SV +         L    +DG         N    T   +  +F+ 
Sbjct: 859  RRGSRTGTLLGHDDSVQNVSWSPDGTRLATASQDGTAVIWDVAQNSAVATLRHEGAVFDL 918

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +SP+ +++  A+          + D R       +      +    +S +G R   +  
Sbjct: 919  AWSPDGERLVTAS----RGAAARIWDVRGRTQLAVLRGHGDELTTVSWSPDGTRIA-TAS 973

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGS 336
            +D    I++          L    +    A++SPDS  +   S DR     L V      
Sbjct: 974  RDSTTRIWNAS-DGTELTVLRGAKYWIGGAAWSPDSRHLATSSTDRT----LCVWDILRG 1028

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLV-EDSNLQA 394
                         +   WSP G  +A          + +     G++   +      +Q 
Sbjct: 1029 TAVTTLHGHTDYAWRVAWSPDGRRLASGSRDRT---VRLWDPFSGAELVTMTGHQERVQG 1085

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
              WSP GR L        D   +L++ D +GR  T+I       +   W  
Sbjct: 1086 VAWSPDGRHLATVSW---DRTVRLWNPD-DGRELTVIGVHDDQVNGLAWHP 1132



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 51/247 (20%), Positives = 91/247 (36%), Gaps = 19/247 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N   LT      ++   +SP+ +++A           V + D         +      +
Sbjct: 606 GNPVVLTRRHGDGVYAVAWSPDGKRLA----GGSRNRSVTIWDAETWAEMGVLIGHDDSV 661

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFE 319
            A  +S +G R   +   D  + I+  D ++      LT         ++SP   Q+   
Sbjct: 662 GALAWSPDGDRLA-TASSDRTVRIW--DAETHAELTVLTGHEQPVWDLAWSPGRGQLASA 718

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMK 377
           SD +G  +++ +   G + +      +AS     WSP G  +A      +   + I V +
Sbjct: 719 SD-DGTVRVWSLTPGGPNTEL--TGHQASVSAVAWSPDGCCLASVSEDRTALVWNIAVAE 775

Query: 378 KDGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           ++G   Q R L   + L   TWSP GR +      D D   +++  D +     LI    
Sbjct: 776 EEGREPQARKLTSLTPLNCVTWSPDGRHIAVG---DDDCTVRVWDTDTS-EESQLIGHTD 831

Query: 436 YASDPQW 442
              D  W
Sbjct: 832 SVHDIAW 838



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 94/285 (32%), Gaps = 20/285 (7%)

Query: 166 ITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +T   GD    + +  +   +  G    S+ + D +      +    D  +    +SP+ 
Sbjct: 611 LTRRHGDGVYAVAWSPDGKRLAGGSRNRSVTIWDAETWAEMGVLIGHDDSVGALAWSPDG 670

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            ++A A+ D      V + D         +      +    +S  G+  L S   D  + 
Sbjct: 671 DRLATASSDR----TVRIWDAETHAELTVLTGHEQPVWDLAWSP-GRGQLASASDDGTVR 725

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREG-KEQLYVMQSNGSDQKRI 341
           ++S+         LT       + ++SPD   +   S DR      + V +  G + +  
Sbjct: 726 VWSLTP-GGPNTELTGHQASVSAVAWSPDGCCLASVSEDRTALVWNIAVAEEEGREPQAR 784

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPS 400
                       WSP G  IA      +   + V   D S+E +L+    ++    W   
Sbjct: 785 KLTSLTPLNCVTWSPDGRHIAV---GDDDCTVRVWDTDTSEESQLIGHTDSVHDIAWH-- 839

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQWVG 444
           G  +    +   D    ++     G R  TL+       +  W  
Sbjct: 840 GHRIATVSR---DRTVAIWDAPRRGSRTGTLLGHDDSVQNVSWSP 881



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 87/267 (32%), Gaps = 17/267 (6%)

Query: 160  DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            +    ++  E   F+       E +V+     +  + D  G     +       L    +
Sbjct: 903  NSAVATLRHEGAVFDLAWSPDGERLVTASRGAAARIWDVRGRTQLAVLRGHGDELTTVSW 962

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+  ++A A+ D        + +         +   +  I    +S + +    +   D
Sbjct: 963  SPDGTRIATASRDS----TTRIWNASDGTELTVLRGAKYWIGGAAWSPDSRHLA-TSSTD 1017

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              + ++ + L+  A   L          ++SPD  ++   S R+   +L+        + 
Sbjct: 1018 RTLCVWDI-LRGTAVTTLHGHTDYAWRVAWSPDGRRLASGS-RDRTVRLW--DPFSGAEL 1073

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLL-VEDSNLQAPTW 397
                  +       WSP G  +A   +      + +   D G +  ++ V D  +    W
Sbjct: 1074 VTMTGHQERVQGVAWSPDGRHLATVSWDRT---VRLWNPDDGRELTVIGVHDDQVNGLAW 1130

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             P G  L    +   D   +++    +
Sbjct: 1131 HPDGSYLATVSR---DRSVRIWEPTTD 1154



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 72/205 (35%), Gaps = 21/205 (10%)

Query: 248 RAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            A +R   FR     + A  +S +G R   +   D  + I+    ++     LT      
Sbjct: 561 GASRRRAVFRGHEQDVNAVTWSPDGSRLA-TASDDGTVRIWDA-REAGNPVVLTRRHGDG 618

Query: 305 ISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           + A ++SPD  ++           + +  +    +  +    + S     WSP GD +A 
Sbjct: 619 VYAVAWSPDGKRLA---GGSRNRSVTIWDAETWAEMGVLIGHDDSVGALAWSPDGDRLAT 675

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLY 419
                    + +   +   E  L   +  + P     WSP GR  + S   DG    +++
Sbjct: 676 ASSDRT---VRIWDAETHAE--LTVLTGHEQPVWDLAWSP-GRGQLASASDDGTV--RVW 727

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
           S+   G N  L    A  S   W  
Sbjct: 728 SLTPGGPNTELTGHQASVSAVAWSP 752



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/258 (13%), Positives = 78/258 (30%), Gaps = 35/258 (13%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            R+WDV+ R Q+   +                      +T      +   +  +    +  
Sbjct: 937  RIWDVRGRTQLAVLRGHGDE-----------------LTTVSWSPDGTRIATASRDSTTR 979

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            I N+      DG  +  +       +    +SP+ + +A ++ D      + + D     
Sbjct: 980  IWNA-----SDGTEL-TVLRGAKYWIGGAAWSPDSRHLATSSTDR----TLCVWDILRGT 1029

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            A   +           +S +G+R   S  +D  + ++           +T         +
Sbjct: 1030 AVTTLHGHTDYAWRVAWSPDGRRLA-SGSRDRTVRLWD-PFSGAELVTMTGHQERVQGVA 1087

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPD   +   S       + +   +   +  +    +       W P G  +A      
Sbjct: 1088 WSPDGRHLATVS---WDRTVRLWNPDDGRELTVIGVHDDQVNGLAWHPDGSYLATVSRDR 1144

Query: 369  EKFAIGVMKKDGSQERLL 386
                + + +     +RLL
Sbjct: 1145 S---VRIWEPTTDMDRLL 1159


>gi|154936836|emb|CAL30203.1| HNWD1 [Podospora anserina]
          Length = 1538

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 89/270 (32%), Gaps = 25/270 (9%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG    ++ + D    +           +    FSP+ + VA  + D      + + D
Sbjct: 843  VASGSRDKTIKIWDAATGSCTQTLAGHRNWVKSVAFSPDSKWVASGSDDS----TIKIWD 898

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
                   + +      + +  FS + K    S   D  + I+  D  + +  + L     
Sbjct: 899  AATGSYTQTLEGHGGSVNSVAFSPDSKWVA-SGSSDSTIKIW--DAATGSYTQTLEGHSG 955

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S ++SPDS  +   S   G + + +  +      +  +    S     +SP    +A
Sbjct: 956  SVNSVAFSPDSKWVASGS---GDDTIKIWDAATGLCTQTLEGHGYSVMSVAFSPDSKWVA 1012

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYS 420
               +      I +           +        +  +SP  + +        D+  K++ 
Sbjct: 1013 SGSYDKT---IKIWDAATGSCTQTLAGHRNWVKSVAFSPDSKWVASGSD---DSTIKIWD 1066

Query: 421  IDLNGRNETL------INTPAYASDPQWVG 444
                   +TL      +N+ A++ D +WV 
Sbjct: 1067 AATGSYTQTLEGHGGSVNSVAFSPDSKWVA 1096



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 89/268 (33%), Gaps = 21/268 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG   +++ + D    +           +    FSP+ + VA  + D      + + D
Sbjct: 1053 VASGSDDSTIKIWDAATGSYTQTLEGHGGSVNSVAFSPDSKWVASGSSDS----TIKIWD 1108

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
                   + +      + +  FS + K    S   D  + I+  D  + +  + L     
Sbjct: 1109 AATGSYTQTLEGHGGSVNSVAFSPDSKWVA-SGSSDSTIKIW--DAATGSYTQTLEGHSG 1165

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S ++SPDS  +   S   G + + +  +      +  +    S     +SP    +A
Sbjct: 1166 SVNSVAFSPDSKWVASGS---GDDTIKIWDAATGLCTQTLEGHRYSVMSVAFSPDSKWVA 1222

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKD----GDTGS 416
               +      I +           +        +  +SP  + +            +  +
Sbjct: 1223 SGSYDKT---IKIWDAATGSCTQTLAGHRNWVKSVAFSPDSKWVASGSGDKTIKIREAAT 1279

Query: 417  KLYSIDLNGRNETLINTPAYASDPQWVG 444
             L +  + G   + +++ A++ D +WV 
Sbjct: 1280 GLCTQTIAGHGLS-VHSVAFSPDSKWVA 1306



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 82/251 (32%), Gaps = 25/251 (9%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             R         +    FSP+ + VA  + D      + + D       + +   R+ + +
Sbjct: 820  CRQTLEGHRHPVDSVAFSPDSKWVASGSRDK----TIKIWDAATGSCTQTLAGHRNWVKS 875

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
              FS + K    S   D  + I+  D  + +  + L        S ++SPDS  +   S 
Sbjct: 876  VAFSPDSKWVA-SGSDDSTIKIW--DAATGSYTQTLEGHGGSVNSVAFSPDSKWVASGSS 932

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                  + +  +      +  +    S     +SP    +A          I +      
Sbjct: 933  ---DSTIKIWDAATGSYTQTLEGHSGSVNSVAFSPDSKWVASGSGDDT---IKIWDAATG 986

Query: 382  QERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INT 433
                 +E    ++ +  +SP  + +        D   K++        +TL      + +
Sbjct: 987  LCTQTLEGHGYSVMSVAFSPDSKWVASGSY---DKTIKIWDAATGSCTQTLAGHRNWVKS 1043

Query: 434  PAYASDPQWVG 444
             A++ D +WV 
Sbjct: 1044 VAFSPDSKWVA 1054



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 88/287 (30%), Gaps = 21/287 (7%)

Query: 163  YQSITGEKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            Y       G   + + F  +S  V SG   +++ + D    +           +    FS
Sbjct: 1072 YTQTLEGHGGSVNSVAFSPDSKWVASGSSDSTIKIWDAATGSYTQTLEGHGGSVNSVAFS 1131

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+ + VA  + D      + + D       + +      + +  FS + K    S   D+
Sbjct: 1132 PDSKWVASGSSDS----TIKIWDAATGSYTQTLEGHSGSVNSVAFSPDSKWVA-SGSGDD 1186

Query: 281  AMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             + I+  D  +    + L    +  +S ++SPDS  +   S     + + +  +      
Sbjct: 1187 TIKIW--DAATGLCTQTLEGHRYSVMSVAFSPDSKWVASGSY---DKTIKIWDAATGSCT 1241

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTW 397
            +             +SP    +A          I + +         +      + +  +
Sbjct: 1242 QTLAGHRNWVKSVAFSPDSKWVA---SGSGDKTIKIREAATGLCTQTIAGHGLSVHSVAF 1298

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            SP  + +       GD   K++        +TL           +  
Sbjct: 1299 SPDSKWVA---SGSGDKTIKIWDAATGSCTQTLAGHGDSVMSVAFSP 1342



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 71/225 (31%), Gaps = 16/225 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG    ++ + D    +           +    FSP+ + VA  + D      + + +
Sbjct: 1221 VASGSYDKTIKIWDAATGSCTQTLAGHRNWVKSVAFSPDSKWVASGSGDK----TIKIRE 1276

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
                   + I      + +  FS + K    S   D+ + I+  D  + +  + L     
Sbjct: 1277 AATGLCTQTIAGHGLSVHSVAFSPDSKWVA-SGSGDKTIKIW--DAATGSCTQTLAGHGD 1333

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              +S ++SPDS  +   S+    + + +  +      +  +          +SP    IA
Sbjct: 1334 SVMSVAFSPDSKGVTSGSN---DKTIKIWDAATGSCTQTLKGHRDFVLSVAFSPDSKWIA 1390

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
                      I +            +       +  +SP  + + 
Sbjct: 1391 SGSRDKT---IKIWDAATGSCTQTFKGHRHWIMSVAFSPDSKWVA 1432



 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 85/238 (35%), Gaps = 25/238 (10%)

Query: 219  FSPNQQ--KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FSP +   +  +   + + I    +++   +   + +   R  + +  FS + K    S 
Sbjct: 788  FSPARSITRGLFREKERKWIALGPIVENNWNACRQTLEGHRHPVDSVAFSPDSKWVA-SG 846

Query: 277  QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +D+ + I+  D  + +  + L        S ++SPDS  +   SD      + +  +  
Sbjct: 847  SRDKTIKIW--DAATGSCTQTLAGHRNWVKSVAFSPDSKWVASGSD---DSTIKIWDAAT 901

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQ 393
                +  +    S     +SP    +A          I +           +E    ++ 
Sbjct: 902  GSYTQTLEGHGGSVNSVAFSPDSKWVASGSSDST---IKIWDAATGSYTQTLEGHSGSVN 958

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSI-------DLNGRNETLINTPAYASDPQWVG 444
            +  +SP  + +       GD   K++          L G   ++++  A++ D +WV 
Sbjct: 959  SVAFSPDSKWVA---SGSGDDTIKIWDAATGLCTQTLEGHGYSVMSV-AFSPDSKWVA 1012



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 68/185 (36%), Gaps = 12/185 (6%)

Query: 170  KGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             GD    + F  +S  V SG    ++ + D    +           +    FSP+ + +A
Sbjct: 1331 HGDSVMSVAFSPDSKGVTSGSNDKTIKIWDAATGSCTQTLKGHRDFVLSVAFSPDSKWIA 1390

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D      + + D       +     R  I++  FS + K    S  +D+ + I+  
Sbjct: 1391 SGSRDK----TIKIWDAATGSCTQTFKGHRHWIMSVAFSPDSKWVA-SGSRDKTIKIWEA 1445

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                + T+ L        S + S +S+ I   SD +     Y + S+    + I++  E 
Sbjct: 1446 -ATGSCTQTLKGHRDSVQSVASSINSTLIASGSD-DANPPCYGINSDN---RWITRGLEN 1500

Query: 348  SYFDP 352
              + P
Sbjct: 1501 WLWLP 1505


>gi|308048966|ref|YP_003912532.1| two component transcriptional regulator, winged helix family
           [Ferrimonas balearica DSM 9799]
 gi|307631156|gb|ADN75458.1| putative two component transcriptional regulator, winged helix
           family [Ferrimonas balearica DSM 9799]
          Length = 696

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 97/266 (36%), Gaps = 14/266 (5%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQ----ILFEPRFSPNQQKVAYATYDDEDILRV 239
             +   +N + V+  DG +     P        +  +   + + +K+  +         +
Sbjct: 278 GEAEDGRNQIFVLPLDGRSPARAVPCSGSACELVDRDVAIADDGKKLLISRRATNSKEVI 337

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT- 298
           +L         +++      +    +  + +RAL + Q+      Y +D+ S   + L  
Sbjct: 338 FLHHLETGEE-RQLTFAFEDVRGMEW-LDERRALFASQRSRIRSGYLLDVDSGERQSLPI 395

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             L         P   Q+VF S  +    + V+     +        EAS+ DP   P  
Sbjct: 396 AGLSY---PRKVPGQPQVVFHS-WDHANYISVLARGDLNHNEPYLRSEASHQDPALEPGS 451

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +A+       + I +   DG + +L   +S L+ P WS  G SL F     G+ G++L
Sbjct: 452 GRLAYVSNESGYYEIWLQDADGERRQLTRMESQLRHPAWSHDGHSLAFLG--PGEQGNQL 509

Query: 419 YSIDLNGRNETLINTPAYASD-PQWV 443
           Y +DL       + +P      P W 
Sbjct: 510 YVMDLESGQIRALPSPYRDHFKPSWS 535



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 94/235 (40%), Gaps = 15/235 (6%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N        +    +P   P   ++AY + +      ++L D   D   +++    S + 
Sbjct: 430 NHNEPYLRSEASHQDPALEPGSGRLAYVSNESG-YYEIWLQD--ADGERRQLTRMESQLR 486

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            P +S +G         ++   +Y +DL+S     L +    +   S+S D   ++    
Sbjct: 487 HPAWSHDGHSLAFLGPGEQGNQLYVMDLESGQIRALPSPYRDHFKPSWSLDDQAVIASVL 546

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYF---DPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            + +  L      GS     ++    +       +W  +G+    ++ +G  + + + K 
Sbjct: 547 ADDQRALAWFPLAGSPSLLTTRPGRYAQMVAPGRIWFSEGN----SRHNGRLYELDMTKP 602

Query: 379 DGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431
           +    +LL+E S    P TW+   ++L F R+  G    +L+  DL  GR+E LI
Sbjct: 603 E-QPPQLLLEPSQFGLPYTWARRDKTLFFMRR--GGDYLELHQYDLVTGRSEALI 654



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 82/238 (34%), Gaps = 12/238 (5%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRF 265
                     P  SP+ + + Y          +YL D T+ D  P+++ +         +
Sbjct: 163 LTRTPGRELFPAPSPDGRYLVYYWNRYTQPSELYLKDLTQPDLPPRKLTDSPDQDGRAYW 222

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESD-RE 323
               +  + +    +   +    L +N   +L +  +   +    S D   + +  +  +
Sbjct: 223 GPKARTLVYARSGRDYCHLVRHRLATNTVTKLADCAVGTAVGLDLSVDGRLLAYLGEAED 282

Query: 324 GKEQLYVMQSNGSDQKRISQDKEAS----YFDPVWSPQGDLIAFTKF-SGEKFAIGVMKK 378
           G+ Q++V+  +G    R      ++      D   +  G  +  ++  +  K  I +   
Sbjct: 283 GRNQIFVLPLDGRSPARAVPCSGSACELVDRDVAIADDGKKLLISRRATNSKEVIFLHHL 342

Query: 379 DGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +  +ER L     +++   W    R  +F+ ++        Y +D++      +    
Sbjct: 343 ETGEERQLTFAFEDVRGMEWL-DERRALFASQRSRIRSG--YLLDVDSGERQSLPIAG 397



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 72/200 (36%), Gaps = 15/200 (7%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQ--SNATERLTNTL 301
           ++ R    +       L P  S +G+  +    +     ++Y  DL        +LT++ 
Sbjct: 155 KLTRQLTSLTRTPGRELFPAPSPDGRYLVYYWNRYTQPSELYLKDLTQPDLPPRKLTDSP 214

Query: 302 FINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             +  A + P +  +V+   R G++   L   +   +   +++     +      S  G 
Sbjct: 215 DQDGRAYWGPKARTLVYA--RSGRDYCHLVRHRLATNTVTKLADCAVGTAVGLDLSVDGR 272

Query: 360 LIAF-TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQ----APTWSPSGRSLIFSRKKDG 412
           L+A+  +    +  I V+  DG      V    S  +        +  G+ L+ SR +  
Sbjct: 273 LLAYLGEAEDGRNQIFVLPLDGRSPARAVPCSGSACELVDRDVAIADDGKKLLISR-RAT 331

Query: 413 DTGSKLYSIDLNGRNETLIN 432
           ++   ++   L    E  + 
Sbjct: 332 NSKEVIFLHHLETGEERQLT 351


>gi|270296907|ref|ZP_06203106.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270272894|gb|EFA18757.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 707

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 55/308 (17%), Positives = 115/308 (37%), Gaps = 67/308 (21%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV      + + VM+ DG++   +T    Q   +P +  + +K+A+   +     +V+ 
Sbjct: 76  YSVPQNKSNSEVFVMNADGSDNTQITHDAWQ-EGQPTWFKDGKKLAFLCNESGSS-QVWE 133

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------------------------ 277
           M+       K++  +   I    FS +GK+ L   Q                        
Sbjct: 134 MNPD-GSGRKQLTQYEGDIEGFSFSPDGKKLLFIAQVKTVKSTADKHPDLPKATGIIVTD 192

Query: 278 ---------KDEAMDIYSVDLQSNATERLTN-------------TLFINISASYSPDSSQ 315
                       A   +  D   NA   +T+                I    ++SP S +
Sbjct: 193 LMYKHWDEWVTTAPHPFVADFDGNAISNVTDILEGEPYESPMKPWGGIE-QLAWSPSSDK 251

Query: 316 IVFE-SDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + +    + G          +Y+      + K I+++ +    +P +SP G  IA+    
Sbjct: 252 VAYTCRKKTGLAYAISTNSDIYIYDLASKETKNITEENKGYDTNPQYSPDGKYIAWQSME 311

Query: 368 GEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            + +      + +M  +  ++R + +  +SN+ A  W+   +S+ F     G+T  ++Y+
Sbjct: 312 RDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFLWNKDSQSIYFIGVWHGET--QIYN 369

Query: 421 IDLNGRNE 428
           IDL G ++
Sbjct: 370 IDLAGNDK 377



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 93/277 (33%), Gaps = 63/277 (22%)

Query: 218 RFSPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+++++AY          +    V++M+       + I +       P +  +GK+ 
Sbjct: 61  AVSPDEKQIAYTVSYYSVPQNKSNSEVFVMNADGSDNTQ-ITHDAWQEGQPTWFKDGKKL 119

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
                +  +  ++ ++   +  ++LT         S+SPD  +++F +            
Sbjct: 120 AFLCNESGSSQVWEMNPDGSGRKQLTQYEGDIEGFSFSPDGKKLLFIAQVKTVKSTADKH 179

Query: 322 ----------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDP------- 352
                                        +V   +G+    ++   E   ++        
Sbjct: 180 PDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNAISNVTDILEGEPYESPMKPWGG 239

Query: 353 ----VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWS 398
                WSP  D +A+T                I +      + + + E+       P +S
Sbjct: 240 IEQLAWSPSSDKVAYTCRKKTGLAYAISTNSDIYIYDLASKETKNITEENKGYDTNPQYS 299

Query: 399 PSGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLIN 432
           P G+ + + S ++DG     ++L+ ++L    +  ++
Sbjct: 300 PDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVS 336



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 82/247 (33%), Gaps = 61/247 (24%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I +   S + K+   +V      Q     +++ ++   +   ++T+  +     ++  
Sbjct: 55  GRIGSVAVSPDEKQIAYTVSYYSVPQNKSNSEVFVMNADGSDNTQITHDAWQEGQPTWFK 114

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--- 368
           D  ++ F  +  G  Q++ M  +GS +K+++Q  E       +SP G  + F        
Sbjct: 115 DGKKLAFLCNESGSSQVWEMNPDGSGRKQLTQY-EGDIEGFSFSPDGKKLLFIAQVKTVK 173

Query: 369 ------------------------------EKFAIGVMKKDGSQERLLVE---DSNLQAP 395
                                               V   DG+    + +       ++P
Sbjct: 174 STADKHPDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNAISNVTDILEGEPYESP 233

Query: 396 ----------TWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLIN--TPAYA 437
                      WSPS   + ++ RKK G      T S +Y  DL  +    I      Y 
Sbjct: 234 MKPWGGIEQLAWSPSSDKVAYTCRKKTGLAYAISTNSDIYIYDLASKETKNITEENKGYD 293

Query: 438 SDPQWVG 444
           ++PQ+  
Sbjct: 294 TNPQYSP 300



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 104/294 (35%), Gaps = 59/294 (20%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------DD 233
           +    + +  M+ DG+  + LT     I     FSP+ +K+ +               D 
Sbjct: 124 NESGSSQVWEMNPDGSGRKQLTQYEGDIEGF-SFSPDGKKLLFIAQVKTVKSTADKHPDL 182

Query: 234 EDILRVYLMDTRIDRAPKRIG--------NFRSMILA----------------P------ 263
                + + D       + +         +F    ++                P      
Sbjct: 183 PKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNAISNVTDILEGEPYESPMKPWGGIEQ 242

Query: 264 -RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLFINISASYSPDS 313
             +S +  +   + +K            DIY  DL S  T+ +T      + +  YSPD 
Sbjct: 243 LAWSPSSDKVAYTCRKKTGLAYAISTNSDIYIYDLASKETKNITEENKGYDTNPQYSPDG 302

Query: 314 SQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             I ++S +R+G      +L++M     +++ +S+  E++    +W+     I F     
Sbjct: 303 KYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFLWNKDSQSIYFIGVWH 362

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +  I  +   G+ +   + D      + +  G  +I +++     G ++Y+++
Sbjct: 363 GETQIYNIDLAGNDKLTQLTDGMYDYASLALCGDKII-AKRHSMSMGDEIYAVN 415


>gi|262164636|ref|ZP_06032374.1| protease-related protein [Vibrio mimicus VM223]
 gi|262027016|gb|EEY45683.1| protease-related protein [Vibrio mimicus VM223]
          Length = 1085

 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 79/257 (30%), Gaps = 43/257 (16%)

Query: 208 PSRDQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
              +     P +      SP+ +++A+             +          +        
Sbjct: 30  TQSEVAHAAPTWLRDIALSPDGKQIAFTYAGQ------IWLVPAQGGEAIALTESGVYSE 83

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP +S + +    +  +    D++ + +Q   + RLT     +   ++S D  Q+ F S 
Sbjct: 84  APVWSPDSQSLAFTANRYGMGDVFILAVQGGESRRLTYHGAKDTPYAFSADGKQLYFSSR 143

Query: 322 REGKE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-- 366
           R G E             QLY +   G  ++ +      +  D   SP    I +T    
Sbjct: 144 RLGDEKANANVKQGGFTAQLYSVPVTGGREQLVL---PIAVSDLAISPTQADILYTNQPS 200

Query: 367 ----------SGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                     S     I        +   +       + P WS  G S+ +  ++ G   
Sbjct: 201 DEQKWRKRAVSDATRDIWKWSPTTGKHSQITSFRGEDRNPVWSVDGTSMYYLSEQAGSF- 259

Query: 416 SKLYSIDLNGRNETLIN 432
             ++  + +G     + 
Sbjct: 260 -NVWQQNFDGSEPVQVT 275



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 76/212 (35%), Gaps = 36/212 (16%)

Query: 262 APRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           AP +      S +GK+   +     A  I+ V  Q      LT +   + +  +SPDS  
Sbjct: 38  APTWLRDIALSPDGKQIAFTY----AGQIWLVPAQGGEAIALTESGVYSEAPVWSPDSQS 93

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-------- 367
           + F ++R G   ++++   G + +R++    A      +S  G  + F+           
Sbjct: 94  LAFTANRYGMGDVFILAVQGGESRRLTYHG-AKDTPYAFSADGKQLYFSSRRLGDEKANA 152

Query: 368 -----GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------G 412
                G    +  +   G +E+ LV    +     SP+   ++++ +             
Sbjct: 153 NVKQGGFTAQLYSVPVTGGREQ-LVLPIAVSDLAISPTQADILYTNQPSDEQKWRKRAVS 211

Query: 413 DTGSKLYSID-LNGRNETLINTPAYASDPQWV 443
           D    ++      G++  + +      +P W 
Sbjct: 212 DATRDIWKWSPTTGKHSQITSFRGEDRNPVWS 243



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 56/318 (17%), Positives = 113/318 (35%), Gaps = 41/318 (12%)

Query: 163 YQSITGEKGDFNSRILFVSESV----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +  IT  +G+  + +  V  +            ++   + DG+    +T  +   +    
Sbjct: 227 HSQITSFRGEDRNPVWSVDGTSMYYLSEQAGSFNVWQQNFDGSEPVQVTHHKQLPVRFLS 286

Query: 219 FSPNQQKVAYATYDD--------EDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNG 269
            S     +AY    +        +   +V +   R      +   NF   +     S N 
Sbjct: 287 TSLQGD-LAYGFDGEIWQLKAGAKQPQKVPVSIRRSAMPDGRHSVNFNHEMTEMVVSPNS 345

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
               I  + D    +Y V L S  T+R+T+T     + ++S D  ++++ S+R G   +Y
Sbjct: 346 PEVAIVARGD----VYVVSLLSGLTQRITDTPEAERNIAFSSDGFRLIYASERGGSWDIY 401

Query: 330 VMQSNGSDQKRISQ---------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
               N   +   +            E     P++SP    IA+ +       +  +++D 
Sbjct: 402 QSYVNDGGKSFSTSLDIVEESVLTAEEDLIQPLYSPNNKRIAYRENRNT-LKVYDIEQD- 459

Query: 381 SQERLLVEDSNLQ------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT- 433
               LL + +         +  WSP    L+   +   +   +L   D +     L N+ 
Sbjct: 460 KTFTLLDDQALYSYFDSDLSYQWSPDSEYLVTRDRAAFNGDIQLLKFDSSEAPVNLSNSG 519

Query: 434 -----PAYASDPQWVGFM 446
                P ++SD QWV ++
Sbjct: 520 FSEFDPQFSSDGQWVYWL 537



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 78/211 (36%), Gaps = 28/211 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN  +VA     D     VY++        +RI +         FSS+G R + + ++ 
Sbjct: 342 SPNSPEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERNIAFSSDGFRLIYASERG 395

Query: 280 EAMDIYSVDLQSNA-----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            + DIY   +                  LT    + I   YSP++ +I +   RE +  L
Sbjct: 396 GSWDIYQSYVNDGGKSFSTSLDIVEESVLTAEEDL-IQPLYSPNNKRIAY---RENRNTL 451

Query: 329 YVMQSNGSDQKRISQDKE-ASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            V          +  D+   SYFD      WSP  + +     +     I ++K D S+ 
Sbjct: 452 KVYDIEQDKTFTLLDDQALYSYFDSDLSYQWSPDSEYLVTRDRAAFNGDIQLLKFDSSEA 511

Query: 384 RL-LVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
            + L      +  P +S  G+ + +     G
Sbjct: 512 PVNLSNSGFSEFDPQFSSDGQWVYWLTDAKG 542



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/334 (12%), Positives = 99/334 (29%), Gaps = 82/334 (24%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDTRIDR 248
            + ++   G   R LT    +      FS + +++ +++    D      V         
Sbjct: 105 DVFILAVQGGESRRLTYHGAKDTPY-AFSADGKQLYFSSRRLGDEKANANVKQGGFTAQL 163

Query: 249 APKRIGNFRSMILAP------RFSSNGKRALISVQK------------DEAMDIYSVDLQ 290
               +   R  ++ P        S      L + Q             D   DI+     
Sbjct: 164 YSVPVTGGREQLVLPIAVSDLAISPTQADILYTNQPSDEQKWRKRAVSDATRDIWKWSPT 223

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE---- 346
           +    ++T+    + +  +S D + + + S++ G   ++    +GS+  +++  K+    
Sbjct: 224 TGKHSQITSFRGEDRNPVWSVDGTSMYYLSEQAGSFNVWQQNFDGSEPVQVTHHKQLPVR 283

Query: 347 -----------ASYFDPVW--------------------SPQGDL----------IAFTK 365
                        +   +W                     P G            +  + 
Sbjct: 284 FLSTSLQGDLAYGFDGEIWQLKAGAKQPQKVPVSIRRSAMPDGRHSVNFNHEMTEMVVSP 343

Query: 366 FSGE-----KFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT----- 414
            S E     +  + V+       + + +    +    +S  G  LI++ ++ G       
Sbjct: 344 NSPEVAIVARGDVYVVSLLSGLTQRITDTPEAERNIAFSSDGFRLIYASERGGSWDIYQS 403

Query: 415 ----GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               G K +S  L+   E+++        P +  
Sbjct: 404 YVNDGGKSFSTSLDIVEESVLTAEEDLIQPLYSP 437



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 12/120 (10%)

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-N 391
           +N   Q  ++        D   SP G  IAFT        I ++   G +   L E    
Sbjct: 26  ANFDTQSEVAHAAPTWLRDIALSPDGKQIAFTYAG----QIWLVPAQGGEAIALTESGVY 81

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-----NTP-AYASDPQWVGF 445
            +AP WSP  +SL F+  + G     + ++   G +  L      +TP A+++D + + F
Sbjct: 82  SEAPVWSPDSQSLAFTANRYGMGDVFILAVQG-GESRRLTYHGAKDTPYAFSADGKQLYF 140



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 19/171 (11%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMD------TRIDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+      DI + Y+ D      T +D   + +      ++ P +S N 
Sbjct: 380 AFSSDGFRLIYASERGGSWDIYQSYVNDGGKSFSTSLDIVEESVLTAEEDLIQPLYSPNN 439

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR      ++    +   D++ + T  L +   +      ++S  +SPDS  +V   DR 
Sbjct: 440 KRIAY---RENRNTLKVYDIEQDKTFTLLDDQALYSYFDSDLSYQWSPDSEYLV-TRDRA 495

Query: 324 G-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                + +++ + S+      +   S FDP +S  G  + +   +     I
Sbjct: 496 AFNGDIQLLKFDSSEAPVNLSNSGFSEFDPQFSSDGQWVYWLTDAKGLREI 546


>gi|261213062|ref|ZP_05927346.1| protease-related protein [Vibrio sp. RC341]
 gi|260838127|gb|EEX64804.1| protease-related protein [Vibrio sp. RC341]
          Length = 1085

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 77/254 (30%), Gaps = 43/254 (16%)

Query: 211 DQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +     P +      SPN Q++A+             +          +         P 
Sbjct: 33  EPSYSHPTWLRDIALSPNGQQIAFTYAGQ------IWLVPAQGGEAIALTESGVYSEMPV 86

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S + +    S  +    D++ + +Q   + RLT     +   ++S D +Q+ F S R G
Sbjct: 87  WSPDSQSLAFSANRYGEGDVFILAVQGGESRRLTYHGAKDTPYAFSADGTQLYFASRRLG 146

Query: 325 KE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
            +             QLY +   G  ++ +      +  D   SP    I ++       
Sbjct: 147 DDKADANVKQGSFTAQLYSIPVTGGRERMVL---PIAVSDLAVSPTQRDILYSNQPSDEQ 203

Query: 367 -------SGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  S     I        Q   L       + P W   G S+ +  ++ G     +
Sbjct: 204 PWRKGAISDATRDIWRWSPQTGQHVQLTSFRGEDRNPVWGADGSSMYYLSERGGSF--NV 261

Query: 419 YSIDLNGRNETLIN 432
           +    +G     I 
Sbjct: 262 WQQRFDGSEPVAIT 275



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 78/233 (33%), Gaps = 32/233 (13%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG +         +++  P  SP    +A       D+  V L+        KRI +  
Sbjct: 324 PDGRHSVNFNHETTEMVVSPS-SPEVAIIA-----RGDVYVVSLL----SGLTKRITDTP 373

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TERLTNTLFINIS 306
                  FSS+G R + + ++  + DIY   +                  LT T  +   
Sbjct: 374 EAERNITFSSDGYRLIYASERGGSWDIYQSYVSDGGKSFSTSFDIVEEPLLTATEDL-TQ 432

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-----KRISQDKEASYFDPVWSPQGDLI 361
             YSPD  +I +   RE    L V              +       S  D  WSP    +
Sbjct: 433 PLYSPDRKRIAY---RENSNTLKVYDIEQDKTYTLLDAQTLYSYIDSDLDYQWSPDSQYL 489

Query: 362 AFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
                +     + ++K DGS+  + L      ++ P +S  G+ + +     G
Sbjct: 490 VTRDRAAFNSDVQLLKFDGSEAPINLSNSGFSESAPQFSVDGQWVYWLTDAKG 542



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 56/306 (18%), Positives = 108/306 (35%), Gaps = 41/306 (13%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ------ 224
           G   S + ++SE   S     ++     DG+    +T      +     S          
Sbjct: 243 GADGSSMYYLSERGGS----FNVWQQRFDGSEPVAITAHEKLPVRFLSASLQGDLVYGFD 298

Query: 225 -KVAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            ++       +   +V +   R      +   NF         S +     I  + D   
Sbjct: 299 GEIWRLQAGAKQPQKVAVSIRRSAMPDGRHSVNFNHETTEMVVSPSSPEVAIIARGD--- 355

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV-MQSNGSDQKRI 341
            +Y V L S  T+R+T+T     + ++S D  ++++ S+R G   +Y    S+G      
Sbjct: 356 -VYVVSLLSGLTKRITDTPEAERNITFSSDGYRLIYASERGGSWDIYQSYVSDGGKSFST 414

Query: 342 SQD--------KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           S D               P++SP    IA+ + S     + V   +  +   L++   L 
Sbjct: 415 SFDIVEEPLLTATEDLTQPLYSPDRKRIAYRENSNT---LKVYDIEQDKTYTLLDAQTLY 471

Query: 394 A-------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT------PAYASDP 440
           +         WSP  + L+   +   ++  +L   D +     L N+      P ++ D 
Sbjct: 472 SYIDSDLDYQWSPDSQYLVTRDRAAFNSDVQLLKFDGSEAPINLSNSGFSESAPQFSVDG 531

Query: 441 QWVGFM 446
           QWV ++
Sbjct: 532 QWVYWL 537



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/339 (13%), Positives = 99/339 (29%), Gaps = 84/339 (24%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED----------IL 237
             +  + ++   G   R LT    +      FS +  ++ +A+    D            
Sbjct: 101 YGEGDVFILAVQGGESRRLTYHGAKDTPY-AFSADGTQLYFASRRLGDDKADANVKQGSF 159

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIY 285
              L    +    +R+      +     S   +  L S Q             D   DI+
Sbjct: 160 TAQLYSIPVTGGRERM-VLPIAVSDLAVSPTQRDILYSNQPSDEQPWRKGAISDATRDIW 218

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--- 342
               Q+    +LT+    + +  +  D S + + S+R G   ++  + +GS+   I+   
Sbjct: 219 RWSPQTGQHVQLTSFRGEDRNPVWGADGSSMYYLSERGGSFNVWQQRFDGSEPVAITAHE 278

Query: 343 ------------QDKEASYFDPVW--------------------SPQGDL-IAFTKFSGE 369
                        D    +   +W                     P G   + F   + E
Sbjct: 279 KLPVRFLSASLQGDLVYGFDGEIWRLQAGAKQPQKVAVSIRRSAMPDGRHSVNFNHETTE 338

Query: 370 --------------KFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT 414
                         +  + V+       + + +    +   T+S  G  LI++ ++ G  
Sbjct: 339 MVVSPSSPEVAIIARGDVYVVSLLSGLTKRITDTPEAERNITFSSDGYRLIYASERGGSW 398

Query: 415 ---------GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                    G K +S   +   E L+      + P +  
Sbjct: 399 DIYQSYVSDGGKSFSTSFDIVEEPLLTATEDLTQPLYSP 437



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 66/171 (38%), Gaps = 19/171 (11%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMD------TRIDRAPKRIGNFRSMILAPRFSSNG 269
            FS +  ++ YA+      DI + Y+ D      T  D   + +      +  P +S + 
Sbjct: 380 TFSSDGYRLIYASERGGSWDIYQSYVSDGGKSFSTSFDIVEEPLLTATEDLTQPLYSPDR 439

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISA--SYSPDSSQIVFESDRE 323
           KR      ++ +  +   D++ + T  L    T   +I+      +SPDS  +V   DR 
Sbjct: 440 KRIAY---RENSNTLKVYDIEQDKTYTLLDAQTLYSYIDSDLDYQWSPDSQYLV-TRDRA 495

Query: 324 G-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                + +++ +GS+      +   S   P +S  G  + +   +     I
Sbjct: 496 AFNSDVQLLKFDGSEAPINLSNSGFSESAPQFSVDGQWVYWLTDAKGLRDI 546


>gi|120437310|ref|YP_862996.1| TolB-like protein [Gramella forsetii KT0803]
 gi|117579460|emb|CAL67929.1| TolB-like protein [Gramella forsetii KT0803]
          Length = 325

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 96/253 (37%), Gaps = 15/253 (5%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANI---RYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +  ++ SV S   +N    ++  G ++   ++  P       +P  +P+ +++A+A    
Sbjct: 65  VYLLTFSVASAQWENRYAKLNDFGHHVYLEQHELPILSHGQTDPAPAPDGKRLAFAARG- 123

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                ++ ++     A  R+ +   +   PR+S +GK             +   +L +  
Sbjct: 124 ----WLWNLNLETGTAV-RLTSGPEVDSRPRWSPDGKHLAFVRDNGLNTAVIIKELATGK 178

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             ++ +T  I +   +S D   + + S   G   L+    +    ++++   +       
Sbjct: 179 ETKI-DTEAIELDPEFSTDGEWLYYTSGVSGSLNLWKYNLSSEMTEQLTNLSQVERNSRS 237

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPSGRSLIFSRKKD 411
            +  G L+ +   SG   A+ +       + + +  +     T    P    +++S   D
Sbjct: 238 LAKDGSLL-YLHGSGAYRALRIKDLKSGSDTIALARTLDYHFTADTHPKQDLIVYSAPID 296

Query: 412 GDTGSKLYSIDLN 424
                 L+++DLN
Sbjct: 297 N--AYHLWTMDLN 307



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 8/129 (6%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              + +PD  ++ F + R     L+ +        R++   E     P WSP G  +AF 
Sbjct: 106 TDPAPAPDGKRLAFAA-RGW---LWNLNLETGTAVRLTSGPEV-DSRPRWSPDGKHLAFV 160

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           + +G   A+ + +    +E  +  ++    P +S  G  L ++    G     L+  +L+
Sbjct: 161 RDNGLNTAVIIKELATGKETKIDTEAIELDPEFSTDGEWLYYTSGVSGS--LNLWKYNLS 218

Query: 425 GR-NETLIN 432
               E L N
Sbjct: 219 SEMTEQLTN 227


>gi|242046452|ref|XP_002461097.1| hypothetical protein SORBIDRAFT_02g040640 [Sorghum bicolor]
 gi|241924474|gb|EER97618.1| hypothetical protein SORBIDRAFT_02g040640 [Sorghum bicolor]
          Length = 669

 Score =  103 bits (256), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 96/283 (33%), Gaps = 59/283 (20%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V+  DG+  +  T S++  LF   +SP +  V + +             T+      R
Sbjct: 381 IRVLRSDGS--KRWTVSKEPNLFYTTWSPTEPGVVFTSMGP------IFETTKATVRIAR 432

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSP 311
           +         P               D   D   V++       LT      +   + SP
Sbjct: 433 V------EFDPA--------------DLTDDDSRVEVGVATVRPLTRPEAGNDAFPAVSP 472

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGE 369
               +VF S R G + LYV+ +   +   + +  E  + D  P WSP G LIAF+    +
Sbjct: 473 CGRWLVFRSGRTGHKNLYVVDTARGEDGGVLRLTEGEWIDTMPSWSPDGSLIAFSSNRHD 532

Query: 370 K-----FAIGVMKKDGSQERLL----------VEDSNLQAPTWSPSGRSLIFSRK----- 409
                 F+I +++ DGS  R +           +   +    +SP  + L+F+       
Sbjct: 533 PANPAVFSIYLVRPDGSGLRRVYVAGPEGSAEADKERINHVCFSPDSQWLLFTANLGSVV 592

Query: 410 -------KDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
                          LY   L+G     +   AY    P W  
Sbjct: 593 AEPISGPNQFQPYGDLYVCRLDGSGLRRLTCNAYENGTPAWGP 635



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 89/291 (30%), Gaps = 36/291 (12%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD---- 232
           I   +           L  ++ +  +      +     + P FSP+  ++ Y  +     
Sbjct: 272 IAVATRRKGRAQRHVELFDLEMERFSPLTELLNPGLHHYNPFFSPSGARLGYHRFRGAGA 331

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             D L  +L   R      R+         P FS +     ++        I  +    +
Sbjct: 332 PGDALVPHLQPVRSPVPSIRMLRVYG--TFPSFSPDAAHLAVNGDFFMTPGIRVLRSDGS 389

Query: 293 ATERLTNTLFINIS-ASYSPDSSQIVFESD--------------------REGKEQLYVM 331
             +R T +   N+   ++SP    +VF S                      +  +    +
Sbjct: 390 --KRWTVSKEPNLFYTTWSPTEPGVVFTSMGPIFETTKATVRIARVEFDPADLTDDDSRV 447

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK----DGSQERLLV 387
           +   +  + +++ +  +   P  SP G  + F         + V+      DG   RL  
Sbjct: 448 EVGVATVRPLTRPEAGNDAFPAVSPCGRWLVFRSGRTGHKNLYVVDTARGEDGGVLRLTE 507

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPA 435
            +     P+WSP G  + FS  +          +Y +  +G     +    
Sbjct: 508 GEWIDTMPSWSPDGSLIAFSSNRHDPANPAVFSIYLVRPDGSGLRRVYVAG 558



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 58/169 (34%), Gaps = 21/169 (12%)

Query: 294 TERLTNTLFINISASYSPD-SSQIVFESDREGKEQLYVMQSNGSDQKR--ISQDKEASYF 350
             R T+ + +N +A ++ D    + F S+R G   L++ +  GS+  R       E S F
Sbjct: 45  ERRHTDGVSVNFNAQFADDAGDAVAFVSERTGAASLFLSRPPGSESDRPEPLPAAEGSLF 104

Query: 351 DPVWSPQGDLIAFTKFSGEK----------FAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
               + +G  + F     +           +A  V ++    ERL        +P  S S
Sbjct: 105 HDRPTVRGGRVYFVSAHEKPDRTFQSWAAVYAARVGERKAEPERLTPRGVVDMSPAVSAS 164

Query: 401 GRSLIFSRKKDGDTG-------SKLYSIDLNGRNETLINTPAYASDPQW 442
           G  +  +   D           +++        +   +  P     P W
Sbjct: 165 GDLIAVASYGDRPWAFDFRVLETEVAVFRAADPSRRAVVAP-RGGWPAW 212


>gi|329963114|ref|ZP_08300894.1| WD40-like protein [Bacteroides fluxus YIT 12057]
 gi|328529155|gb|EGF56085.1| WD40-like protein [Bacteroides fluxus YIT 12057]
          Length = 1089

 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 78/220 (35%), Gaps = 34/220 (15%)

Query: 253 IGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +    S   AP +      S +G     + + D    IY+V +      ++T     + +
Sbjct: 13  VSGIASAQDAPLWLRHSAISPDGTAIAFTYKGD----IYTVPVAGGRATQVTTNPAYDTA 68

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI----- 361
             +SPD  QI F SDR G   +Y++   G + +R++     S     +S  G ++     
Sbjct: 69  PVWSPDGKQIAFASDRLGSMDVYLVAKEGGEPRRLTT-HSGSETPVAFSDAGHILFSADI 127

Query: 362 -----AFTKFSGEKFA-IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--------FS 407
                A T  S  +F  +  +  +G +  ++     ++  + +  G  L         + 
Sbjct: 128 MPSAEAVTFPSNGQFRQVYQVPVEGGRP-VMFSSMPMECISVNKEGVMLYQDKKGYEDYW 186

Query: 408 RKKDGDTGSKLYSIDLNGRN---ETLINTPAYASDPQWVG 444
           RK      ++   +   G+    +          +P W  
Sbjct: 187 RKHQVSPIARDVWMYTPGKEPAYQRQTTFGGEDREPVWAP 226



 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 59/303 (19%), Positives = 112/303 (36%), Gaps = 42/303 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ E G FN            G    +  +       +R+L+ + D  L    +S +
Sbjct: 231 FYYLSEENGTFN------VYRRTPGAASAT-QITHHTKHPVRFLSVAADGKLC---YSFD 280

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +            + V ++  + D+   R             S  GK     ++ D   
Sbjct: 281 GELYTLVPGGQPAKVAVSIVSDKNDKDLVRSIRNSGATEM-AVSPGGKEVAFVLRGD--- 336

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   ++   T+++TNT +     +++PD   +V+ S+R G  QLY       D+K  +
Sbjct: 337 -VYVTSVEYKTTKQITNTPYQERDINFAPDGRSLVYASERGGLWQLYTSSIVRKDEKLFT 395

Query: 343 QDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---- 388
              E           + F P +SP G  +AF +      AI V+       R +++    
Sbjct: 396 YATELKEERLTHSDVASFQPQYSPDGKEVAFLENRA---AIRVINLKTKAVRTVMDAKYQ 452

Query: 389 ----DSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-- 440
               D +     WSP  R ++  F     G     +  ++ +G+ E +  T +  SD   
Sbjct: 453 YSYADGDQWF-QWSPDSRWILSDFIGT-GGWNNKDVVLLNADGKGEMVNLTESGYSDGNA 510

Query: 441 QWV 443
           +WV
Sbjct: 511 KWV 513



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 79/227 (34%), Gaps = 33/227 (14%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            L     SP+   +A+      DI  V +          ++    +   AP +S +GK+ 
Sbjct: 25  WLRHSAISPDGTAIAFTY--KGDIYTVPV----AGGRATQVTTNPAYDTAPVWSPDGKQI 78

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +  +  +MD+Y V  +     RLT         ++S D+  I+F +D     +     
Sbjct: 79  AFASDRLGSMDVYLVAKEGGEPRRLTTHSGSETPVAFS-DAGHILFSADIMPSAEAVTFP 137

Query: 333 SNGSDQKRISQDKEASYFDPVWSP----------QGDLIAFTKFSGEKF----------- 371
           SNG   +++ Q         ++S           +G ++   K   E +           
Sbjct: 138 SNG-QFRQVYQVPVEGGRPVMFSSMPMECISVNKEGVMLYQDKKGYEDYWRKHQVSPIAR 196

Query: 372 AIGVMKKDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            + +    G +    R        + P W+P G S  +  +++G   
Sbjct: 197 DVWMYTP-GKEPAYQRQTTFGGEDREPVWAPDGTSFYYLSEENGTFN 242



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 86/246 (34%), Gaps = 29/246 (11%)

Query: 222 NQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              +  +  +    I R V++     + A +R   F      P ++ +G       +++ 
Sbjct: 180 KGYEDYWRKHQVSPIARDVWMYTPGKEPAYQRQTTFGGEDREPVWAPDGTSFYYLSEENG 239

Query: 281 AMDIYSVDLQSNATERLTNTL---------FINISASYSPDSSQIVFESDREGKEQLYVM 331
             ++Y     + +  ++T+             +    YS D    ++     G+     +
Sbjct: 240 TFNVYRRTPGAASATQITHHTKHPVRFLSVAADGKLCYSFDGE--LYTLVPGGQPAKVAV 297

Query: 332 Q--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              S+ +D+  +   + +   +   SP G  +AF         + V   +    + +   
Sbjct: 298 SIVSDKNDKDLVRSIRNSGATEMAVSPGGKEVAFVLRGD----VYVTSVEYKTTKQITNT 353

Query: 390 SNLQAP-TWSPSGRSLIFSRKKDG----------DTGSKLYSIDLNGRNETLINTPAYAS 438
              +    ++P GRSL+++ ++ G              KL++     + E L ++   + 
Sbjct: 354 PYQERDINFAPDGRSLVYASERGGLWQLYTSSIVRKDEKLFTYATELKEERLTHSDVASF 413

Query: 439 DPQWVG 444
            PQ+  
Sbjct: 414 QPQYSP 419



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 82/246 (33%), Gaps = 43/246 (17%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  +  +   G     +T         P +SP+ +++A+A+      + VYL+  +  
Sbjct: 41  TYKGDIYTVPVAGGRATQVTT-NPAYDTAPVWSPDGKQIAFASDRLGS-MDVYLV-AKEG 97

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISV------------QKDEAMDIYSVDLQSNATE 295
             P+R+           FS +    L S                +   +Y V ++     
Sbjct: 98  GEPRRLTTHSGSETPVAFS-DAGHILFSADIMPSAEAVTFPSNGQFRQVYQVPVEGGRPV 156

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV------------MQSNGSD---QKR 340
             ++     IS +       ++++ D++G E  +             M + G +   Q++
Sbjct: 157 MFSSMPMECISVN---KEGVMLYQ-DKKGYEDYWRKHQVSPIARDVWMYTPGKEPAYQRQ 212

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
            +   E    +PVW+P G    +       F +       +    +    + + P    +
Sbjct: 213 TTFGGE--DREPVWAPDGTSFYYLSEENGTFNVYRRTPGAASATQITH--HTKHPVRFLS 268

Query: 397 WSPSGR 402
            +  G+
Sbjct: 269 VAADGK 274



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 46/123 (37%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
               D   F+P++SP+ ++VA+        ++ +     R     K   ++       ++
Sbjct: 405 LTHSDVASFQPQYSPDGKEVAFLENRAAIRVINLKTKAVRTVMDAKYQYSYADGDQWFQW 464

Query: 266 SSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + +  L            D+  ++         LT + + + +A +      +++ SD
Sbjct: 465 SPDSRWILSDFIGTGGWNNKDVVLLNADGKGEMVNLTESGYSDGNAKWVLGGKAMIWTSD 524

Query: 322 REG 324
           R G
Sbjct: 525 RAG 527


>gi|317479118|ref|ZP_07938258.1| prolyl oligopeptidase [Bacteroides sp. 4_1_36]
 gi|316904690|gb|EFV26504.1| prolyl oligopeptidase [Bacteroides sp. 4_1_36]
          Length = 699

 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 55/308 (17%), Positives = 115/308 (37%), Gaps = 67/308 (21%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV      + + VM+ DG++   +T    Q   +P +  + +K+A+   +     +V+ 
Sbjct: 68  YSVPQNKSNSEVFVMNADGSDNTQITHDAWQ-EGQPTWFKDGKKLAFLCNESGSS-QVWE 125

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------------------------ 277
           M+       K++  +   I    FS +GK+ L   Q                        
Sbjct: 126 MNPD-GSGRKQLTQYEGDIEGFSFSPDGKKLLFIAQVKTVKSTADKHPDLPKATGIIVTD 184

Query: 278 ---------KDEAMDIYSVDLQSNATERLTN-------------TLFINISASYSPDSSQ 315
                       A   +  D   NA   +T+                I    ++SP S +
Sbjct: 185 LMYKHWDEWVTTAPHPFVADFDGNAISNVTDILEGEPYESPMKPWGGIE-QLAWSPSSDK 243

Query: 316 IVFE-SDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + +    + G          +Y+      + K I+++ +    +P +SP G  IA+    
Sbjct: 244 VAYTCRKKTGLAYAISTNSDIYIYDLASKETKNITEENKGYDTNPQYSPDGKYIAWQSME 303

Query: 368 GEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            + +      + +M  +  ++R + +  +SN+ A  W+   +S+ F     G+T  ++Y+
Sbjct: 304 RDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFLWNKDSQSIYFIGVWHGET--QIYN 361

Query: 421 IDLNGRNE 428
           IDL G ++
Sbjct: 362 IDLAGNDK 369



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 93/277 (33%), Gaps = 63/277 (22%)

Query: 218 RFSPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+++++AY          +    V++M+       + I +       P +  +GK+ 
Sbjct: 53  AVSPDEKQIAYTVSYYSVPQNKSNSEVFVMNADGSDNTQ-ITHDAWQEGQPTWFKDGKKL 111

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
                +  +  ++ ++   +  ++LT         S+SPD  +++F +            
Sbjct: 112 AFLCNESGSSQVWEMNPDGSGRKQLTQYEGDIEGFSFSPDGKKLLFIAQVKTVKSTADKH 171

Query: 322 ----------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDP------- 352
                                        +V   +G+    ++   E   ++        
Sbjct: 172 PDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNAISNVTDILEGEPYESPMKPWGG 231

Query: 353 ----VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWS 398
                WSP  D +A+T                I +      + + + E+       P +S
Sbjct: 232 IEQLAWSPSSDKVAYTCRKKTGLAYAISTNSDIYIYDLASKETKNITEENKGYDTNPQYS 291

Query: 399 PSGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLIN 432
           P G+ + + S ++DG     ++L+ ++L    +  ++
Sbjct: 292 PDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVS 328



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 82/247 (33%), Gaps = 61/247 (24%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I +   S + K+   +V      Q     +++ ++   +   ++T+  +     ++  
Sbjct: 47  GRIGSVAVSPDEKQIAYTVSYYSVPQNKSNSEVFVMNADGSDNTQITHDAWQEGQPTWFK 106

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--- 368
           D  ++ F  +  G  Q++ M  +GS +K+++Q  E       +SP G  + F        
Sbjct: 107 DGKKLAFLCNESGSSQVWEMNPDGSGRKQLTQY-EGDIEGFSFSPDGKKLLFIAQVKTVK 165

Query: 369 ------------------------------EKFAIGVMKKDGSQERLLVE---DSNLQAP 395
                                               V   DG+    + +       ++P
Sbjct: 166 STADKHPDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNAISNVTDILEGEPYESP 225

Query: 396 ----------TWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLIN--TPAYA 437
                      WSPS   + ++ RKK G      T S +Y  DL  +    I      Y 
Sbjct: 226 MKPWGGIEQLAWSPSSDKVAYTCRKKTGLAYAISTNSDIYIYDLASKETKNITEENKGYD 285

Query: 438 SDPQWVG 444
           ++PQ+  
Sbjct: 286 TNPQYSP 292



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 104/294 (35%), Gaps = 59/294 (20%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------DD 233
           +    + +  M+ DG+  + LT     I     FSP+ +K+ +               D 
Sbjct: 116 NESGSSQVWEMNPDGSGRKQLTQYEGDIEGF-SFSPDGKKLLFIAQVKTVKSTADKHPDL 174

Query: 234 EDILRVYLMDTRIDRAPKRIG--------NFRSMILA----------------P------ 263
                + + D       + +         +F    ++                P      
Sbjct: 175 PKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNAISNVTDILEGEPYESPMKPWGGIEQ 234

Query: 264 -RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLFINISASYSPDS 313
             +S +  +   + +K            DIY  DL S  T+ +T      + +  YSPD 
Sbjct: 235 LAWSPSSDKVAYTCRKKTGLAYAISTNSDIYIYDLASKETKNITEENKGYDTNPQYSPDG 294

Query: 314 SQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             I ++S +R+G      +L++M     +++ +S+  E++    +W+     I F     
Sbjct: 295 KYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFLWNKDSQSIYFIGVWH 354

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +  I  +   G+ +   + D      + +  G  +I +++     G ++Y+++
Sbjct: 355 GETQIYNIDLAGNDKLTQLTDGMYDYASLALCGDKII-AKRHSMSMGDEIYAVN 407


>gi|73668999|ref|YP_305014.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
 gi|72396161|gb|AAZ70434.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
          Length = 675

 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 77/202 (38%), Gaps = 10/202 (4%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           T    +P       +   + ++  +  G R +    ++   DIY  D+ +    R+T   
Sbjct: 30  TAESGSPTITETQITTNTSYQWGPDIYGDRIVWRDGRNGNSDIYMYDISTKKETRITT-- 87

Query: 302 FINISASYSPD--SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             N S  + P    ++IV+  DR     +Y+   +   + +IS  +         +  GD
Sbjct: 88  --NTSDKWDPAIYGNRIVWVDDRNRSWDIYMYDLSTKKETQISNYEFEFEDTGNPAVYGD 145

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            I +T    E + I +      +E  +  +     P     G  +++   +D D    +Y
Sbjct: 146 KIVWTHGFEEYWQIYMYDLSTKKETQITTNGRAYYPAI--YGNKIVWLDDRDSDYNYDIY 203

Query: 420 SIDLNGRNETLINTPAYASDPQ 441
             DL+ + E+ I T   A +P 
Sbjct: 204 MYDLSTKKESQITTSGSADNPA 225



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 81/236 (34%), Gaps = 26/236 (11%)

Query: 218 RFSPN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRA 272
           ++ P     ++ +   D      +Y+ D    +   +I N+         P     G + 
Sbjct: 92  KWDPAIYGNRIVWVD-DRNRSWDIYMYDLST-KKETQISNYEFEFEDTGNPAVY--GDKI 147

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYV 330
           + +   +E   IY  DL +    ++T        A Y    ++IV+  DR+      +Y+
Sbjct: 148 VWTHGFEEYWQIYMYDLSTKKETQITTNGRAYYPAIY---GNKIVWLDDRDSDYNYDIYM 204

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
              +   + +I+    A          G+ I +       + I +       E  +    
Sbjct: 205 YDLSTKKESQITTSGSADNPAIY----GNRIVYADDRKGNYDIYMYDISTKAETQITSSP 260

Query: 391 NLQAPTWSPS--GRSLIFS---RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           + Q    SP+  G  +++     + DG     +Y  DL+   +  I +     DP 
Sbjct: 261 DNQV---SPNIYGNRILWKDVGGEDDGGEYHGIYMCDLSTNQKFKITSHGDWDDPA 313



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/204 (12%), Positives = 73/204 (35%), Gaps = 18/204 (8%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI- 236
           ++  + V +   +    +   D +  +    + +   + P       K+ +    D D  
Sbjct: 142 VYGDKIVWTHGFEEYWQIYMYDLSTKKETQITTNGRAYYPAIY--GNKIVWLDDRDSDYN 199

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             +Y+ D    +  +   +  +   A      G R + +  +    DIY  D+ + A  +
Sbjct: 200 YDIYMYDLSTKKESQITTSGSADNPAIY----GNRIVYADDRKGNYDIYMYDISTKAETQ 255

Query: 297 LTNTLFINISASYSPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           +T++    +S +     ++I++     E D      +Y+   + + + +I+   +     
Sbjct: 256 ITSSPDNQVSPNIY--GNRILWKDVGGEDDGGEYHGIYMCDLSTNQKFKITSHGDWDDPA 313

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGV 375
                 G+ + +T      + I +
Sbjct: 314 IY----GNRVVYTDNRNGNYDIYM 333



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 49/124 (39%), Gaps = 16/124 (12%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRAL---ISVQ 277
             ++ YA  D +    +Y+ D       +   +  + +     S N  G R L   +  +
Sbjct: 228 GNRIVYAD-DRKGNYDIYMYDISTKAETQITSSPDNQV-----SPNIYGNRILWKDVGGE 281

Query: 278 KDEAMD--IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            D      IY  DL +N   ++T+    +  A Y    +++V+  +R G   +Y+   + 
Sbjct: 282 DDGGEYHGIYMCDLSTNQKFKITSHGDWDDPAIY---GNRVVYTDNRNGNYDIYMSTISS 338

Query: 336 SDQK 339
            + +
Sbjct: 339 EEPE 342


>gi|254410150|ref|ZP_05023930.1| hypothetical protein MC7420_7908 [Microcoleus chthonoplastes PCC
            7420]
 gi|196183186|gb|EDX78170.1| hypothetical protein MC7420_7908 [Microcoleus chthonoplastes PCC
            7420]
          Length = 1869

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 118/348 (33%), Gaps = 57/348 (16%)

Query: 88   KQKITNPDSIPRFQDWNSLGAQVLV-------TGRVIKEGKD------RLRVEFRLWDVK 134
             ++I +       + W+  GA++ V        G V                  RLWD K
Sbjct: 1526 GEQIASASDDGTVRLWDKKGAELAVLRGHESWVGSVTFSPDGAQIASASSDGTVRLWD-K 1584

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
               ++   +            H  S  +        G            + S     ++ 
Sbjct: 1585 KGAELAVLR-----------GHESS--VGSVTFSPDGA----------QIASASWDKTVR 1621

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + D+ G  +  +    +  +    FSP+ +++A A+ D      V L D +       + 
Sbjct: 1622 LWDKKGKELA-VLRGHEDSVRSVTFSPDGEQIASASDDG----TVRLWD-KKGAELAVLR 1675

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               S + +  FS +G +   S   D  + ++  D +      L        S ++SPD +
Sbjct: 1676 GHESSVGSVTFSPDGAQIA-SASSDGTVRLW--DKKGAELAVLRGHESSVGSVTFSPDGA 1732

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            QI   S     + + +    G +   + +  E       +SP G  IA     G    + 
Sbjct: 1733 QIASAS---WDKTVRLWDKKGKELAVL-RGHENWVRSVTFSPDGAQIASASGDGT---VR 1785

Query: 375  VMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +  K G++  +L    +   + ++SP G+ +       GD   +L+ +
Sbjct: 1786 LWDKKGAELAVLRGHEDWVLSVSFSPDGKQIA---SASGDGTVRLWRV 1830



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 67/358 (18%), Positives = 129/358 (36%), Gaps = 59/358 (16%)

Query: 88   KQKITNPDSIPRFQDWNSLGAQVLV-------TGRVIKEGKDRLRVE------FRLWDVK 134
              +I +       + W+  GA++ V          V                  RLWD K
Sbjct: 1321 GAQIASASEDGTVRLWDKKGAELAVLRGHEDWVSSVTFSPDGAQIASASEDGTVRLWD-K 1379

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
               ++   +            H   D +        G          E + S     ++ 
Sbjct: 1380 KGAELAVLR-----------GHE--DWVGSVTFSPDG----------EQIASASGDGTVR 1416

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + D+ GA +  +    +  +    FSP+  ++A A+ D      V L D +       + 
Sbjct: 1417 LWDKKGAELA-VLRGHESWVGSVTFSPDGAQIASASEDG----TVRLWD-KKGAELAVLR 1470

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               + +L+  FS +G +   S   D  + ++  D +      L       IS ++SPD  
Sbjct: 1471 GHEASVLSVTFSPDGAQIA-SASGDGTVRLW--DKKGAELAVLRGHEASVISVTFSPDGE 1527

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            QI   SD +G  +L+     G++   + +  E+      +SP G  IA     G    + 
Sbjct: 1528 QIASASD-DGTVRLW--DKKGAELAVL-RGHESWVGSVTFSPDGAQIASASSDGT---VR 1580

Query: 375  VMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +  K G++  +L   +S++ + T+SP G  +  +     D   +L+  D  G+   ++
Sbjct: 1581 LWDKKGAELAVLRGHESSVGSVTFSPDGAQIASASW---DKTVRLW--DKKGKELAVL 1633



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 90/216 (41%), Gaps = 17/216 (7%)

Query: 199  DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            D    R      +  +    FSP+ +++A A+ D      V L D +       +    +
Sbjct: 1256 DQIRERNQLRGHEDWVRSVTFSPDGEQIASASSDG----TVRLWD-KKGAELAVLRGHEA 1310

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +L+  FS +G +   S  +D  + ++  D +      L        S ++SPD +QI  
Sbjct: 1311 SVLSVTFSPDGAQIA-SASEDGTVRLW--DKKGAELAVLRGHEDWVSSVTFSPDGAQIAS 1367

Query: 319  ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             S+ +G  +L+     G++   + +  E       +SP G+ IA     G    + +  K
Sbjct: 1368 ASE-DGTVRLW--DKKGAELAVL-RGHEDWVGSVTFSPDGEQIASASGDGT---VRLWDK 1420

Query: 379  DGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G++  +L   +S + + T+SP G  +  S  +DG 
Sbjct: 1421 KGAELAVLRGHESWVGSVTFSPDGAQIA-SASEDGT 1455



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 57/305 (18%), Positives = 101/305 (33%), Gaps = 50/305 (16%)

Query: 88   KQKITNPDSIPRFQDWNSLGAQVLV-------TGRVIKEGKDRLRVE------FRLWDVK 134
              +I +  S    + W+  GA++ V        G V                  RLWD K
Sbjct: 1567 GAQIASASSDGTVRLWDKKGAELAVLRGHESSVGSVTFSPDGAQIASASWDKTVRLWD-K 1625

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
              K++   +            H   D +        G          E + S     ++ 
Sbjct: 1626 KGKELAVLR-----------GHE--DSVRSVTFSPDG----------EQIASASDDGTVR 1662

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + D+ GA +  +    +  +    FSP+  ++A A+ D      V L D +       + 
Sbjct: 1663 LWDKKGAELA-VLRGHESSVGSVTFSPDGAQIASASSDG----TVRLWD-KKGAELAVLR 1716

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               S + +  FS +G +   S   D+ + ++  D +      L        S ++SPD +
Sbjct: 1717 GHESSVGSVTFSPDGAQIA-SASWDKTVRLW--DKKGKELAVLRGHENWVRSVTFSPDGA 1773

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            QI   S   G   + +    G++   + +  E       +SP G  IA     G      
Sbjct: 1774 QIASAS---GDGTVRLWDKKGAELAVL-RGHEDWVLSVSFSPDGKQIASASGDGTVRLWR 1829

Query: 375  VMKKD 379
            V   D
Sbjct: 1830 VETLD 1834



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 80/215 (37%), Gaps = 21/215 (9%)

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            Y     L          R   ++      + +  FS +G++   S   D  + ++  D +
Sbjct: 1242 YPAYSPLSALQQILDQIRERNQLRGHEDWVRSVTFSPDGEQIA-SASSDGTVRLW--DKK 1298

Query: 291  SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                  L       +S ++SPD +QI   S+ +G  +L+     G++   + +  E    
Sbjct: 1299 GAELAVLRGHEASVLSVTFSPDGAQIASASE-DGTVRLW--DKKGAELAVL-RGHEDWVS 1354

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRK 409
               +SP G  IA     G    + +  K G++  +L    +   + T+SP G  +     
Sbjct: 1355 SVTFSPDGAQIASASEDGT---VRLWDKKGAELAVLRGHEDWVGSVTFSPDGEQIA---S 1408

Query: 410  KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              GD   +L+    + +   L     + S   WVG
Sbjct: 1409 ASGDGTVRLW----DKKGAELAVLRGHES---WVG 1436


>gi|86158162|ref|YP_464947.1| WD-40-like beta propeller repeat-containing protein
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774673|gb|ABC81510.1| WD-40 repeat-containing protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 1021

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 3/118 (2%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP  S +G+R    +Q+    D+     +     R+T+   ++   +++PD   ++F SD
Sbjct: 500 APSPSPDGQRIAFELQEGGRRDLAL--WEHGELRRVTDDDALDTGPAWTPDGRYLLFASD 557

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           R G   LY  ++     ++++ + E   F P  SP G  IAF  F  + + +  +  D
Sbjct: 558 RGGVYDLYAWEAATGAIRQVT-NVETGAFQPAVSPDGKTIAFVTFGRDGYDVATVPFD 614



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 6/119 (5%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S SPD  +I FE    G+  L + +    + +R++ D +A    P W+P G  + F   
Sbjct: 501 PSPSPDGQRIAFELQEGGRRDLALWEH--GELRRVTDD-DALDTGPAWTPDGRYLLFASD 557

Query: 367 SGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            G  + +   +      R +   ++    P  SP G+++ F     G  G  + ++  +
Sbjct: 558 RGGVYDLYAWEAATGAIRQVTNVETGAFQPAVSPDGKTIAFVTF--GRDGYDVATVPFD 614



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 47/317 (14%), Positives = 90/317 (28%), Gaps = 86/317 (27%)

Query: 208 PSRDQILFEPRFSP----NQQKVAYATYDDEDILRVYLMDTRIDRA------PKRIGNFR 257
                  + P ++     + +       +  +  R +    R          P R+    
Sbjct: 275 QGSQVWPYAPSWAGARAFDGRDFPSLWAEYAEEERRHAEAVRARVHERPVTVPTRLTRAG 334

Query: 258 SMILAPRFSSNGKRALI-------------------------SVQKDEAM---------- 282
             +  PR+S +G                              +V  + A+          
Sbjct: 335 GRVETPRWSPDGSYLAYQKRDLDRRPGTYRVTPAGADLGLAITVDANGALSLASPREAVV 394

Query: 283 -------------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
                        D+++VDL   A  RLT+        +  P    +V+     G     
Sbjct: 395 AIGEVWRLHRTYDDLWAVDLVRGARRRLTDGE-RAGDPAVVPGGGAVVYVRHEAGGRMAL 453

Query: 330 V---------MQSNGSDQKR-------------ISQDKEASYF---DPVWSPQGDLIAFT 364
           V         +  + + ++R             +   +  +      P  SP G  IAF 
Sbjct: 454 VRRSLPPAPMVPEDVTLRERRDELAVPPPAQVEVLFARPGAQVYAPAPSPSPDGQRIAFE 513

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              G +  + + +  G   R+  +D+    P W+P GR L+F+  + G      +     
Sbjct: 514 LQEGGRRDLALWEH-GELRRVTDDDALDTGPAWTPDGRYLLFASDRGGVYDLYAWEA-AT 571

Query: 425 GRNETLINTPAYASDPQ 441
           G    + N    A  P 
Sbjct: 572 GAIRQVTNVETGAFQPA 588



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 55/139 (39%), Gaps = 5/139 (3%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            ++ L V       + +  P        P  SP+ Q++A+   +         +      
Sbjct: 473 RRDELAVPPPAQVEVLFARPGAQVYAPAPSPSPDGQRIAFELQEGGRR----DLALWEHG 528

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +R+ +  ++   P ++ +G+  L +  +    D+Y+ +  + A  ++TN        +
Sbjct: 529 ELRRVTDDDALDTGPAWTPDGRYLLFASDRGGVYDLYAWEAATGAIRQVTNVETGAFQPA 588

Query: 309 YSPDSSQIVFES-DREGKE 326
            SPD   I F +  R+G +
Sbjct: 589 VSPDGKTIAFVTFGRDGYD 607



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 82/251 (32%), Gaps = 38/251 (15%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +          +  PR+SP+   +AY   D +     Y +          I    +  L+
Sbjct: 326 VPTRLTRAGGRVETPRWSPDGSYLAYQKRDLDRRPGTYRVTPAGADLGLAITVDANGALS 385

Query: 263 PRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              S   + A++++ +         D+++VDL   A  RLT+        +  P    +V
Sbjct: 386 LA-SP--REAVVAIGEVWRLHRTYDDLWAVDLVRGARRRLTDGE-RAGDPAVVPGGGAVV 441

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +     G               R++  + +    P+                +  + V  
Sbjct: 442 YVRHEAGG--------------RMALVRRSLPPAPMVPED------VTLRERRDELAVPP 481

Query: 378 KDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              +Q  +L      Q    AP+ SP G+ + F  ++ G     L+    +G    + + 
Sbjct: 482 P--AQVEVLFARPGAQVYAPAPSPSPDGQRIAFELQEGGRRDLALWE---HGELRRVTDD 536

Query: 434 PAYASDPQWVG 444
            A  + P W  
Sbjct: 537 DALDTGPAWTP 547



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 33/84 (39%), Gaps = 2/84 (2%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               D +   P ++P+ + + +A+ D   +  +Y  +     A +++ N  +    P  S
Sbjct: 533 VTDDDALDTGPAWTPDGRYLLFAS-DRGGVYDLYAWEAATG-AIRQVTNVETGAFQPAVS 590

Query: 267 SNGKRALISVQKDEAMDIYSVDLQ 290
            +GK         +  D+ +V   
Sbjct: 591 PDGKTIAFVTFGRDGYDVATVPFD 614


>gi|254416128|ref|ZP_05029883.1| hypothetical protein MC7420_7550 [Microcoleus chthonoplastes PCC
           7420]
 gi|196177061|gb|EDX72070.1| hypothetical protein MC7420_7550 [Microcoleus chthonoplastes PCC
           7420]
          Length = 706

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 98/266 (36%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG    ++ + + +           D  +    FSP+ + +A  + D+     + L
Sbjct: 192 KTLASGSEDKTIKLWNLETGEAIATLDEHDSSVISVSFSPDGKTLASGSGDN----TIKL 247

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
            +    +A   +    S +++  FS +GK    S   D  + ++  +L++      LT  
Sbjct: 248 WNLETGKAISTLTGHDSGVISVSFSPDGKTLA-SGSGDNTIKLW--NLETGEVIATLTRY 304

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S S+SPD   + F SD      + +      +         +      +SP G +
Sbjct: 305 NLWVNSVSFSPDGKTLAFGSD---DNTIKLWNLETGEVIATLIGHNSGVISVNFSPDGKI 361

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A          I +  ++  +    +     ++ + ++SP G+ L       GD   KL
Sbjct: 362 LASGSGDNT---IKLWNRETGEAIATLTGHYFSVNSVSFSPDGKILA---SGSGDNTIKL 415

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           ++ +     +TL     + +   +  
Sbjct: 416 WNRETGETIDTLTIYNLWVNSASFSP 441



 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 87/240 (36%), Gaps = 17/240 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG    ++ + + +           D  +    FSP+ + +A  + D      + L
Sbjct: 150 KTLASGSEDKTIKLWNLETGEAIATLDEHDSWVNSVSFSPDGKTLASGSEDK----TIKL 205

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +     A   +    S +++  FS +GK    S   D  + +++++    A   LT   
Sbjct: 206 WNLETGEAIATLDEHDSSVISVSFSPDGKTLA-SGSGDNTIKLWNLE-TGKAISTLTGHD 263

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              IS S+SPD   +   S   G   + +      +                +SP G  +
Sbjct: 264 SGVISVSFSPDGKTLASGS---GDNTIKLWNLETGEVIATLTRYNLWVNSVSFSPDGKTL 320

Query: 362 AFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           AF         I +   +  +    L+  +S + +  +SP G+ L       GD   KL+
Sbjct: 321 AFGSDDNT---IKLWNLETGEVIATLIGHNSGVISVNFSPDGKILA---SGSGDNTIKLW 374



 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 91/255 (35%), Gaps = 19/255 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + + +           D  +    FSP+ + +A  + D      + L +  
Sbjct: 112 SGSEDKTIKLWNLETGEAIATLDEHDSSVISVSFSPDGKTLASGSEDK----TIKLWNLE 167

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
              A   +    S + +  FS +GK    S  +D+ + ++  +L++      L       
Sbjct: 168 TGEAIATLDEHDSWVNSVSFSPDGKTLA-SGSEDKTIKLW--NLETGEAIATLDEHDSSV 224

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           IS S+SPD   +   S   G   + +               ++      +SP G  +A  
Sbjct: 225 ISVSFSPDGKTLASGS---GDNTIKLWNLETGKAISTLTGHDSGVISVSFSPDGKTLASG 281

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                   I +   +  +    +   NL   + ++SP G++L F      D   KL++++
Sbjct: 282 SGDNT---IKLWNLETGEVIATLTRYNLWVNSVSFSPDGKTLAFGSD---DNTIKLWNLE 335

Query: 423 LNGRNETLINTPAYA 437
                 TLI   +  
Sbjct: 336 TGEVIATLIGHNSGV 350



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 103/278 (37%), Gaps = 15/278 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            + G  +       +++ SG   N++ + + +   +       +  +    FSP+ + +A
Sbjct: 262 HDSGVISVSFSPDGKTLASGSGDNTIKLWNLETGEVIATLTRYNLWVNSVSFSPDGKTLA 321

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           + + D+     + L +         +    S +++  FS +GK  L S   D  + ++  
Sbjct: 322 FGSDDN----TIKLWNLETGEVIATLIGHNSGVISVNFSPDGK-ILASGSGDNTIKLW-- 374

Query: 288 DLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           + ++      LT   F   S S+SPD   +   S   G   + +      +         
Sbjct: 375 NRETGEAIATLTGHYFSVNSVSFSPDGKILASGS---GDNTIKLWNRETGETIDTLTIYN 431

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                  +SP G  +A +    +   +  ++   +   +   DS + + ++SP G+ L  
Sbjct: 432 LWVNSASFSPDGKTLA-SGNEDKTIKLWNLETGEAIATITGHDSGVISVSFSPDGKILA- 489

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                GD   KL++++     +TL    +  +   +  
Sbjct: 490 --SGSGDNTIKLWNLETGKNIDTLYGHDSSVNSVSFSP 525



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 90/241 (37%), Gaps = 19/241 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               D  +    FSP+ + +A  + D      + L +     A   +    S +++  FS
Sbjct: 91  LEEHDSSVNSVSFSPDGKILASGSEDK----TIKLWNLETGEAIATLDEHDSSVISVSFS 146

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGK 325
            +GK    S  +D+ + ++  +L++      L        S S+SPD   +   S+    
Sbjct: 147 PDGKTLA-SGSEDKTIKLW--NLETGEAIATLDEHDSWVNSVSFSPDGKTLASGSE---D 200

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-- 383
           + + +      +      + ++S     +SP G  +A          I +   +  +   
Sbjct: 201 KTIKLWNLETGEAIATLDEHDSSVISVSFSPDGKTLASGSGDNT---IKLWNLETGKAIS 257

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            L   DS + + ++SP G++L       GD   KL++++      TL     + +   + 
Sbjct: 258 TLTGHDSGVISVSFSPDGKTLA---SGSGDNTIKLWNLETGEVIATLTRYNLWVNSVSFS 314

Query: 444 G 444
            
Sbjct: 315 P 315



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 94/242 (38%), Gaps = 14/242 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   N++ + +R+           +  +    FSP+ + +A    D      + L +  
Sbjct: 406 SGSGDNTIKLWNRETGETIDTLTIYNLWVNSASFSPDGKTLASGNEDK----TIKLWNLE 461

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              A   I    S +++  FS +GK  L S   D  + +++++      + L        
Sbjct: 462 TGEAIATITGHDSGVISVSFSPDGK-ILASGSGDNTIKLWNLE-TGKNIDTLYGHDSSVN 519

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S S+SPD   +   SD      + +      +        ++S     +SP G ++A + 
Sbjct: 520 SVSFSPDGKTLASGSD---DYTIKLWNIKTGENIDTLYGHDSSVNSVSFSPDGKILA-SG 575

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                  +  ++   + + L    S++ + ++SP G++L        D   KL++I   G
Sbjct: 576 SGDNTIKLWNIETGEAIDSLTGHYSSVNSVSFSPDGKTLA---SGSEDNTIKLWNIK-TG 631

Query: 426 RN 427
           +N
Sbjct: 632 KN 633



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 85/224 (37%), Gaps = 10/224 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG    ++ + + +           D  +    FSP+ + +A  + D+     + L
Sbjct: 444 KTLASGNEDKTIKLWNLETGEAIATITGHDSGVISVSFSPDGKILASGSGDN----TIKL 499

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +    +    +    S + +  FS +GK    S   D  + ++++    N      +  
Sbjct: 500 WNLETGKNIDTLYGHDSSVNSVSFSPDGKTLA-SGSDDYTIKLWNIKTGENIDTLYGHDS 558

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +N S S+SPD   +   S   G   + +      +         +S     +SP G  +
Sbjct: 559 SVN-SVSFSPDGKILASGS---GDNTIKLWNIETGEAIDSLTGHYSSVNSVSFSPDGKTL 614

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           A +        +  +K   + + L    S++ + ++SP G++L 
Sbjct: 615 A-SGSEDNTIKLWNIKTGKNIDTLYGHYSSVNSVSFSPDGKTLA 657



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 79/213 (37%), Gaps = 15/213 (7%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            +  V        +    +    S + +  FS +GK  L S  +D+ + ++  +L++   
Sbjct: 73  RVANVLWQAVNKLKPYNSLEEHDSSVNSVSFSPDGK-ILASGSEDKTIKLW--NLETGEA 129

Query: 295 E-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              L       IS S+SPD   +   S+    + + +      +      + ++      
Sbjct: 130 IATLDEHDSSVISVSFSPDGKTLASGSE---DKTIKLWNLETGEAIATLDEHDSWVNSVS 186

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKD 411
           +SP G  +A          I +   +  +    ++  DS++ + ++SP G++L       
Sbjct: 187 FSPDGKTLASGSEDKT---IKLWNLETGEAIATLDEHDSSVISVSFSPDGKTLA---SGS 240

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           GD   KL++++      TL    +      +  
Sbjct: 241 GDNTIKLWNLETGKAISTLTGHDSGVISVSFSP 273



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 58/141 (41%), Gaps = 8/141 (5%)

Query: 182 ESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +++ SG    ++ + + + G NI  L    D  +    FSP+ + +A  + D+     + 
Sbjct: 528 KTLASGSDDYTIKLWNIKTGENIDTLY-GHDSSVNSVSFSPDGKILASGSGDN----TIK 582

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L +     A   +    S + +  FS +GK    S  +D  + ++++       + L   
Sbjct: 583 LWNIETGEAIDSLTGHYSSVNSVSFSPDGKTLA-SGSEDNTIKLWNI-KTGKNIDTLYGH 640

Query: 301 LFINISASYSPDSSQIVFESD 321
                S S+SPD   +   SD
Sbjct: 641 YSSVNSVSFSPDGKTLASGSD 661


>gi|255548311|ref|XP_002515212.1| conserved hypothetical protein [Ricinus communis]
 gi|223545692|gb|EEF47196.1| conserved hypothetical protein [Ricinus communis]
          Length = 666

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 61/383 (15%), Positives = 121/383 (31%), Gaps = 79/383 (20%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI-----SDDIYQSITGEKG 171
            +    + R    ++D+          F+          H       +D ++      +G
Sbjct: 275 TRRPDKKYR-HIEIFDLASG------TFYPVTELLNPSLHHYNPFVSADSLFIGYHRFRG 327

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
                   +            L ++  +G+               P FSP+   +A+   
Sbjct: 328 GSGHGERTIRNLEPVRSPIKDLRMLRLNGS--------------FPSFSPDGNLMAFNPD 373

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV------QKDEAMDIY 285
             +    + ++ +   +    I +   +     +S   K  + +            + I 
Sbjct: 374 FVDSSGGLKVVKSNGSKRWTLIKD--RVAFCNSWSPTEKHVIFTSLGPIFESAKTTVQIA 431

Query: 286 SV-----DLQSN------ATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            V     DL+S+        + LT      N   S SPD   +VF S R G + LY++ +
Sbjct: 432 RVTFKPSDLKSDHNEVSCDVKILTREDTGNNAFPSCSPDGESLVFRSGRSGHKNLYIIDA 491

Query: 334 NGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQER 384
              +     ++++ +       P WSP+GDLIAF+           F+I V++ DGS  +
Sbjct: 492 VEGEFNGGIRQLT-EGPWIDTMPSWSPKGDLIAFSSNRHNPNNVNAFSIYVIRPDGSGLK 550

Query: 385 LLV----------EDSNLQAPTWSPSGRSLIFSRK------------KDGDTGSKLYSID 422
            +           E   +    +S  G  L+F+                      L+   
Sbjct: 551 RIHVAGSEGSSEGERGRINHVCFSRDGEWLLFTGNLGSVTAEPVSWPNQFQPYGDLHVTR 610

Query: 423 LNGRNETLINTPAY-ASDPQWVG 444
           L+G   + +    +    P W  
Sbjct: 611 LDGSGLSRLTWNGFENGTPAWHP 633



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 94/317 (29%), Gaps = 51/317 (16%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD--D 233
           RI   +           +  +            +     + P  S +   + Y  +    
Sbjct: 270 RIAVATRRPDKKYRHIEIFDLASGTFYPVTELLNPSLHHYNPFVSADSLFIGYHRFRGGS 329

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---SVQKDEAMDIYSVDLQ 290
               R       +    K +   R     P FS +G         V     + +    ++
Sbjct: 330 GHGERTIRNLEPVRSPIKDLRMLRLNGSFPSFSPDGNLMAFNPDFVDSSGGLKV----VK 385

Query: 291 SNATERLTNTLFINIS-ASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKR--- 340
           SN ++R T          S+SP    ++F S        +   Q+  +    SD K    
Sbjct: 386 SNGSKRWTLIKDRVAFCNSWSPTEKHVIFTSLGPIFESAKTTVQIARVTFKPSDLKSDHN 445

Query: 341 --------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DG---SQERLLVE 388
                   ++++   +   P  SP G+ + F         + ++   +G      R L E
Sbjct: 446 EVSCDVKILTREDTGNNAFPSCSPDGESLVFRSGRSGHKNLYIIDAVEGEFNGGIRQLTE 505

Query: 389 DSNLQ-APTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPA--------- 435
              +   P+WSP G  + FS  +          +Y I  +G     I+            
Sbjct: 506 GPWIDTMPSWSPKGDLIAFSSNRHNPNNVNAFSIYVIRPDGSGLKRIHVAGSEGSSEGER 565

Query: 436 -------YASDPQWVGF 445
                  ++ D +W+ F
Sbjct: 566 GRINHVCFSRDGEWLLF 582



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 55/280 (19%), Positives = 89/280 (31%), Gaps = 46/280 (16%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR---VYLMDTRIDRAPKRIGNFRS 258
           N            F P    + +++A AT   +   R   ++ + +        + N   
Sbjct: 247 NAPLRVTPPGVHCFTPAAMHDGKRIAVATRRPDKKYRHIEIFDLASGTFYPVTELLNPSL 306

Query: 259 MILAPRFSSNGKRALISVQKDE---------AMDIYSVDLQSNATERLTNTLFINISASY 309
               P  S++         +            ++     ++     RL          S+
Sbjct: 307 HHYNPFVSADSLFIGYHRFRGGSGHGERTIRNLEPVRSPIKDLRMLRL-----NGSFPSF 361

Query: 310 SPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD + + F  D  +    L V++SNGS  KR +  K+   F   WSP    + FT    
Sbjct: 362 SPDGNLMAFNPDFVDSSGGLKVVKSNGS--KRWTLIKDRVAFCNSWSPTEKHVIFTSLGP 419

Query: 369 ------EKFAIGVMKKDGS-----------QERLLV--EDSNLQAPTWSPSGRSLIFSRK 409
                     I  +    S             ++L   +  N   P+ SP G SL+F   
Sbjct: 420 IFESAKTTVQIARVTFKPSDLKSDHNEVSCDVKILTREDTGNNAFPSCSPDGESLVFRSG 479

Query: 410 KDGDTGSKLYSIDL-----NGRNETLINTPAYASDPQWVG 444
           + G     LY ID      NG    L   P   + P W  
Sbjct: 480 RSGHK--NLYIIDAVEGEFNGGIRQLTEGPWIDTMPSWSP 517



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 55/165 (33%), Gaps = 29/165 (17%)

Query: 284 IYSVDL-----QSNATERLTNTLFINISASYSPDSSQIVFESDREG---------KEQLY 329
           +YS DL     + +   RLT    ++ S + S   + I   S                + 
Sbjct: 130 LYSTDLSHSRREGDNVTRLTPFGVVDFSPAISLSGNFIAVASYGSRPWSGEFHELNTDIV 189

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIG-------VMKKDGS 381
           V +++  D++ +  ++      P WS     I F + +    ++I        +    GS
Sbjct: 190 VFKASDPDKRAVVSERGG---WPTWSLD-SAIYFHRQAEDGWWSIFQVKFPENMDDVSGS 245

Query: 382 ---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                R+     +   P     G+ +  + ++       +   DL
Sbjct: 246 VNAPLRVTPPGVHCFTPAAMHDGKRIAVATRRPDKKYRHIEIFDL 290



 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 55/170 (32%), Gaps = 24/170 (14%)

Query: 297 LTNTLFINISASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           LT+   IN +A +       +  IV+ S+R G   +Y+ + N S  +++    E+ + D 
Sbjct: 44  LTDGTSINYNAQFVTQQHHQNQSIVYISERSGFPAMYLSKPNLSKPEQLPSAPESLFHDR 103

Query: 353 VWSPQGDLIAFTKFSGEKFAI-----GVMKKD-------GSQERLLVEDSNLQ-APTWSP 399
               + D + F     +   +      +   D       G     L     +  +P  S 
Sbjct: 104 PI-IKNDRLYFISAHEKPDQLFRSWSALYSTDLSHSRREGDNVTRLTPFGVVDFSPAISL 162

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLN------GRNETLINTPAYASDPQWV 443
           SG  +  +         + + ++ +         +           P W 
Sbjct: 163 SGNFIAVASYGSRPWSGEFHELNTDIVVFKASDPDKRAVVSERGGWPTWS 212


>gi|32474435|ref|NP_867429.1| TolB protein, protein/colicin/DNA uptake system [Rhodopirellula
            baltica SH 1]
 gi|32444973|emb|CAD74975.1| probable TolB protein, protein/colicin/DNA uptake system
            [Rhodopirellula baltica SH 1]
          Length = 1178

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 103/283 (36%), Gaps = 37/283 (13%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             S   K  L V+  DG  +R L         +  P +SP+ +++AY            LM
Sbjct: 886  SSPDPKPVLSVVRLDGTGLRDLAEPTGSMTRVGSPDWSPDGKQIAY-NQHAGSTRTARLM 944

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTL 301
               +         F SM   P +S +GK+   S        +  +    +    L     
Sbjct: 945  RIEVSGGVPVDLGFGSM---PTYSPDGKQIAFSAAGQG---VGIMAADGSNRTILDPRGW 998

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-----YFDPVWSP 356
             I     +SP  + + +         L++   N S  + I Q   A+      ++  WSP
Sbjct: 999  GIQ----WSPRPNLLTYSI----GGNLFIWDLNTSSSRPILQGPYATRYSYIDWNISWSP 1050

Query: 357  QGDLIAF--TKFSGEKFAIGVMKKDG-SQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDG 412
             G+LIA    +       I V+     S+ R+L   + +    +WS   R L+F      
Sbjct: 1051 DGELIAIKGRRRDNSDDEIAVVTVSAPSRLRVLASPTKIGGEFSWSSDSRHLLFPMLDIE 1110

Query: 413  DTGSKLYSIDL--NGRNETLINTPAY--------ASDPQWVGF 445
               S+L+SID+  +G  +   N P+         ++D  W  F
Sbjct: 1111 SGRSRLHSIDVAASGLPKIWPNQPSDRQIFGIDLSTDGTWFAF 1153



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 72/198 (36%), Gaps = 13/198 (6%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            +M  DG+N   L P    I    ++SP    + Y+   +  I  +    +R         
Sbjct: 982  IMAADGSNRTILDPRGWGI----QWSPRPNLLTYSIGGNLFIWDLNTSSSRPILQGPYAT 1037

Query: 255  NFRSMILAPRFSSNGKRALISVQK----DEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             +  +     +S +G+   I  ++    D+ + + +V   S     L +   I    S+S
Sbjct: 1038 RYSYIDWNISWSPDGELIAIKGRRRDNSDDEIAVVTVSAPSR-LRVLASPTKIGGEFSWS 1096

Query: 311  PDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKF 366
             DS  ++F       G+ +L+ +    S   +I  ++ +    F    S  G   AFT  
Sbjct: 1097 SDSRHLLFPMLDIESGRSRLHSIDVAASGLPKIWPNQPSDRQIFGIDLSTDGTWFAFTAE 1156

Query: 367  SGEKFAIGVMKKDGSQER 384
               +      + + S  +
Sbjct: 1157 PESRVVPWRRQPESSPYQ 1174



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 43/102 (42%), Gaps = 7/102 (6%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPSGR 402
            S      S + + +  +     K  + V++ DG+  R L E +     + +P WSP G+
Sbjct: 868 TSTTWNQVSLRAEEMLVSSSPDPKPVLSVVRLDGTGLRDLAEPTGSMTRVGSPDWSPDGK 927

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            + +++       ++L  I+++G    +     + S P +  
Sbjct: 928 QIAYNQHAGSTRTARLMRIEVSGG---VPVDLGFGSMPTYSP 966


>gi|320107933|ref|YP_004183523.1| transcriptional regulator CadC [Terriglobus saanensis SP1PR4]
 gi|319926454|gb|ADV83529.1| transcriptional regulator, CadC [Terriglobus saanensis SP1PR4]
          Length = 739

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 99/274 (36%), Gaps = 28/274 (10%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           ++ L  M   G            +      +    ++ +   D +  + +Y   ++    
Sbjct: 416 ESDLWRMGGHGVGTPQRLTDGPMVFQGAVAARTGTRIFFTGVDVQSDVEIYRPQSKDFGP 475

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +   +F        FS + +    +   D    ++   +  +   +LT          +
Sbjct: 476 VQ---SFLRDAHRLEFSRDRQWVAWA---DTNGRLWRARIDGSEKLQLTPDAIQVFLVRW 529

Query: 310 SPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD +++       GK  Q+Y+++++GS  +R+ Q+   +  DP WSP G  +AF +   
Sbjct: 530 SPDGNRLALMGRETGKAWQIYLVKADGSALERVLQESR-NAGDPTWSPDGKSLAFGRVPD 588

Query: 369 ------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                 E   + ++  D    + L    NL +P WSP GR +            +L   D
Sbjct: 589 LMGKEEEARMVQIVDLDTRAVQTLPGSENLFSPRWSPDGRHIAAISLDQ----RRLMLYD 644

Query: 423 LNGRNETLINTPAYASDPQWV---------GFMD 447
                   +   ++A DP W          GFMD
Sbjct: 645 TATHQWRQLAYGSFA-DPVWTSDNQAIIAHGFMD 677



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 63/363 (17%), Positives = 130/363 (35%), Gaps = 68/363 (18%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           DV++ K  + +    S  +       I D++     G+     SR+L  S   +S   + 
Sbjct: 232 DVQEGKVELVQISTVSGDA---KPLGIPDEVMGPSVGDISPDGSRLLIRSH--LSNESEQ 286

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++   G + + +    + +  +  + PN + V +A   +E +   +L D  I+   K
Sbjct: 287 PLWMVPVGGGSAQRV---PNVLAHDATWMPNGEDVLFAA--EEKLFVAHLKDRSIEEMAK 341

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINIS--- 306
                       R+SS+GKR   ++         ++ +D  S + + L      +     
Sbjct: 342 L----PGRAFWLRWSSDGKRLRFTIFDPITHTQALWQLDAGSASPKPLLKGWKEDADTCC 397

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQD--------------------- 344
             ++ D S  +F++    +  L+ M  +G    +R++                       
Sbjct: 398 GVWTADGSSFIFQAMHGNESDLWRMGGHGVGTPQRLTDGPMVFQGAVAARTGTRIFFTGV 457

Query: 345 ----------KEASYFDPV-----------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                      ++  F PV           +S     +A+   +G    +   + DGS++
Sbjct: 458 DVQSDVEIYRPQSKDFGPVQSFLRDAHRLEFSRDRQWVAWADTNG---RLWRARIDGSEK 514

Query: 384 RLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQ 441
             L  D+  +    WSP G  L    ++ G    ++Y +  +G   E ++     A DP 
Sbjct: 515 LQLTPDAIQVFLVRWSPDGNRLALMGRETGK-AWQIYLVKADGSALERVLQESRNAGDPT 573

Query: 442 WVG 444
           W  
Sbjct: 574 WSP 576



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 73/213 (34%), Gaps = 15/213 (7%)

Query: 226 VAYATYDDEDILRVYLMDTR-IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           +A A +      +V +   R I      +   R+M   P   ++G     S  ++  +++
Sbjct: 181 IAGAFFLGAGREQVLVPKLRQITHDGHILPGSRAMEAFPAVVTDGVHLFTSDVQEGKVEL 240

Query: 285 YSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQ--LYVMQSNGSDQK 339
             +   S   + L       +  S    SPD S+++  S    + +  L+++   G   +
Sbjct: 241 VQISTVSGDAKPLGI-PDEVMGPSVGDISPDGSRLLIRSHLSNESEQPLWMVPVGGGSAQ 299

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWS 398
           R+         D  W P G+ + F         + V    D S E +           WS
Sbjct: 300 RV---PNVLAHDATWMPNGEDVLFAAEE----KLFVAHLKDRSIEEMAKLPGRAFWLRWS 352

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             G+ L F+          L+ +D    +   +
Sbjct: 353 SDGKRLRFTIFDPITHTQALWQLDAGSASPKPL 385



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 20/163 (12%)

Query: 293 ATERLTN-------TLFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRI-SQ 343
              ++T+       +  +    +   D   + F SD +EGK +L  + +   D K +   
Sbjct: 198 KLRQITHDGHILPGSRAMEAFPAVVTDGVHL-FTSDVQEGKVELVQISTVSGDAKPLGIP 256

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           D+         SP G  +        +    + ++   G   + +         TW P+G
Sbjct: 257 DEVMGPSVGDISPDGSRLLIRSHLSNESEQPLWMVPVGGGSAQRVPN-VLAHDATWMPNG 315

Query: 402 RSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWV 443
             ++F+ ++      KL+   L +   E +   P  A   +W 
Sbjct: 316 EDVLFAAEE------KLFVAHLKDRSIEEMAKLPGRAFWLRWS 352



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 8/105 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + ++D D   ++ L  S +  LF PR+SP+ + +A  + D     R+ L DT   +  + 
Sbjct: 599 VQIVDLDTRAVQTLPGSEN--LFSPRWSPDGRHIAAISLDQR---RLMLYDTATHQWRQL 653

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                     P ++S+ +  +     D    I  V +Q    E L
Sbjct: 654 ---AYGSFADPVWTSDNQAIIAHGFMDSRQPIVRVAVQDGRVEEL 695


>gi|156060563|ref|XP_001596204.1| hypothetical protein SS1G_02421 [Sclerotinia sclerotiorum 1980]
 gi|154699828|gb|EDN99566.1| hypothetical protein SS1G_02421 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 968

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 97/292 (33%), Gaps = 39/292 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K          RLWD    + +   +            H  SD +        G     
Sbjct: 677 TKVASGSHDNTIRLWDAMTGESLQTLE-----------GH--SDWVKSVAFSPDG----- 718

Query: 177 ILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                  V SG    ++ + D   G +++ L    D +     FSP+  KVA  + D+  
Sbjct: 719 -----TKVASGSDDETIRLWDAMTGESLQTLEGHSDSVSSV-AFSPDGTKVASGSDDE-- 770

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              + L D     + + +      + +  FS +G +   S   D+ + ++   +   + +
Sbjct: 771 --TIRLWDAMTGESLQTLEGHSGSVSSVAFSPDGTKVA-SGSHDKTIRLWDA-MTGESLQ 826

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L        S ++SPD +++   S     + + +  +   +  +  +    S     +S
Sbjct: 827 TLEGHSGSVSSVAFSPDGTKVASGSH---DKTIRLWDAMTGESLQTLEGHSGSVSSVAFS 883

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
           P G  +A          I +      +    +E   S + +  +SP G  + 
Sbjct: 884 PDGTKVASGSHDKT---IRLWDAMTGESLQTLEGHSSWVNSVAFSPDGTKVA 932



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 83/273 (30%), Gaps = 35/273 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K          RLWD    + +   +            H  SD +        G     
Sbjct: 719 TKVASGSDDETIRLWDAMTGESLQTLE-----------GH--SDSVSSVAFSPDG----- 760

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                  V SG    ++ + D                +    FSP+  KVA  ++D    
Sbjct: 761 -----TKVASGSDDETIRLWDAMTGESLQTLEGHSGSVSSVAFSPDGTKVASGSHDK--- 812

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L D     + + +      + +  FS +G +   S   D+ + ++   +   + + 
Sbjct: 813 -TIRLWDAMTGESLQTLEGHSGSVSSVAFSPDGTKVA-SGSHDKTIRLWDA-MTGESLQT 869

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L        S ++SPD +++   S     + + +  +   +  +  +   +      +SP
Sbjct: 870 LEGHSGSVSSVAFSPDGTKVASGSH---DKTIRLWDAMTGESLQTLEGHSSWVNSVAFSP 926

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            G  +A          I +      +    +E 
Sbjct: 927 DGTKVASGSHDKT---IRLWDAMTGESLQTLEG 956



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 77/228 (33%), Gaps = 11/228 (4%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           F+P    +   +  Y    I ++    +    A + +      + +  FS +G +   S 
Sbjct: 624 FAPENSIIRKTFQEYIPSWIYKISRTRSNWSAALQTLEGHSGSVKSVAFSPDGTKVA-SG 682

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  + ++   +   + + L        S ++SPD +++   SD    E + +  +   
Sbjct: 683 SHDNTIRLWDA-MTGESLQTLEGHSDWVKSVAFSPDGTKVASGSD---DETIRLWDAMTG 738

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +  +  +    S     +SP G  +A +    E   +       S + L     ++ +  
Sbjct: 739 ESLQTLEGHSDSVSSVAFSPDGTKVA-SGSDDETIRLWDAMTGESLQTLEGHSGSVSSVA 797

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +SP G  +        D   +L+        +TL       S   +  
Sbjct: 798 FSPDGTKVASGSH---DKTIRLWDAMTGESLQTLEGHSGSVSSVAFSP 842



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 23/168 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQI------------------IGKKFFSSPASWRKIAHTI 158
            K          RLWD    + +                    K    S     ++   +
Sbjct: 803 TKVASGSHDKTIRLWDAMTGESLQTLEGHSGSVSSVAFSPDGTKVASGSHDKTIRLWDAM 862

Query: 159 SDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           + +  Q++ G  G  +S       + V SG    ++ + D                +   
Sbjct: 863 TGESLQTLEGHSGSVSSVAFSPDGTKVASGSHDKTIRLWDAMTGESLQTLEGHSSWVNSV 922

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            FSP+  KVA  ++D      + L D     + + +    S+  +  F
Sbjct: 923 AFSPDGTKVASGSHDK----TIRLWDAMTGESLQTLEGHSSLQASSAF 966


>gi|325103940|ref|YP_004273594.1| WD40-like beta Propeller containing protein [Pedobacter saltans DSM
           12145]
 gi|324972788|gb|ADY51772.1| WD40-like beta Propeller containing protein [Pedobacter saltans DSM
           12145]
          Length = 1053

 Score =  102 bits (255), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 93/247 (37%), Gaps = 27/247 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---------FRSM 259
           +  ++   P  SP+ + +A+ +  D   + +YL D +  +  +++ +         F  +
Sbjct: 299 NGGEMNVAPAISPDGKYLAFLSEKDLFSIDLYLADAKTGKIIRKLTSRIKNSHIDEFNFI 358

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQI 316
             A  +S + K+   S        +  VD++S     L   +       + ++SP+   +
Sbjct: 359 ESAGAWSPDSKQFAFSAFSKGRNQLVIVDIESG-RTLLEKAMGEVEQFGNITWSPNGKDL 417

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------- 369
            F   + G+  ++    +     +++ DK  + F P +S  G  I F+    +       
Sbjct: 418 AFTGLQNGQSDIFSYNLDTQQITQLTNDK-YTDFQPSYSTDGKKIVFSTDRLDLDKGLSA 476

Query: 370 --KFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                + V+     +   +     +N   P +  + +++ F   +DG     LY  +   
Sbjct: 477 YISMNLAVLDLATKEVTNIDIFAGANNFNPVFDSTDKNIYFLSNRDGFR--NLYKYNFAT 534

Query: 426 RNETLIN 432
            + T + 
Sbjct: 535 HSTTQLT 541



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 92/288 (31%), Gaps = 25/288 (8%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           A  + I   + D++           +    +++      +    L + D     I     
Sbjct: 285 AQTKPIGTKLIDNVNGGEMNVAPAISPDGKYLAFLSEKDLFSIDLYLADAKTGKIIRKLT 344

Query: 209 SR---------DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           SR         + I     +SP+ ++ A++ +       V +         ++       
Sbjct: 345 SRIKNSHIDEFNFIESAGAWSPDSKQFAFSAFSKGRNQLVIVDIESGRTLLEKAMGEVEQ 404

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                +S NGK    +  ++   DI+S +L +    +LTN  + +   SYS D  +IVF 
Sbjct: 405 FGNITWSPNGKDLAFTGLQNGQSDIFSYNLDTQQITQLTNDKYTDFQPSYSTDGKKIVFS 464

Query: 320 SDREG---------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +DR              L V+     +   I     A+ F+PV+      I F       
Sbjct: 465 TDRLDLDKGLSAYISMNLAVLDLATKEVTNIDIFAGANNFNPVFDSTDKNIYFLSNRDGF 524

Query: 371 FAIGVMKKDGSQERLLVE------DSNLQAPTWSPS-GRSLIFSRKKD 411
             +            L +           +P  S S    +++S  + 
Sbjct: 525 RNLYKYNFATHSTTQLTDYFTGISGITENSPALSISKNDDIVYSYYRS 572



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 76/169 (44%), Gaps = 26/169 (15%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKR-ISQDKEASY------- 349
           N   +N++ + SPD   + F S+++     LY+  +      R ++   + S+       
Sbjct: 299 NGGEMNVAPAISPDGKYLAFLSEKDLFSIDLYLADAKTGKIIRKLTSRIKNSHIDEFNFI 358

Query: 350 -FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----TWSPSGRS 403
                WSP     AF+ FS  +  + ++  +    R L+E +  +       TWSP+G+ 
Sbjct: 359 ESAGAWSPDSKQFAFSAFSKGRNQLVIVDIESG--RTLLEKAMGEVEQFGNITWSPNGKD 416

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGF 445
           L F+  ++G   S ++S +L+ +  T +         P+Y++D + + F
Sbjct: 417 LAFTGLQNGQ--SDIFSYNLDTQQITQLTNDKYTDFQPSYSTDGKKIVF 463


>gi|116622825|ref|YP_824981.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225987|gb|ABJ84696.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 864

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 75/427 (17%), Positives = 149/427 (34%), Gaps = 40/427 (9%)

Query: 27  FFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL--GGKVSEVVSKDLQRSDVFNLISQ 84
           F P      V+V+       P+ +        D L     + +    DL     F  I  
Sbjct: 418 FAPGVTGTLVRVSGTGGGPVPLPLPRAGSGERDSLRFPAFLPD---SDL----FFYTIEA 470

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
            + + +     S+        L    L   R +     R R  + L+    +  ++ + F
Sbjct: 471 QTHQGEGVYVGSLNGAPPVRIL--PDLSITRFVPSPNSRTR-GYILF--CRQTTLMAQAF 525

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSESVVSGIIKNSLCVMDRDG 200
            ++       A  ++DD+ Q ++G KG  +    +  L +  +  +      +  +DR G
Sbjct: 526 DAASLKTAGEAFPLADDV-QVVSGNKGFVDFTVSTNGLLIYAAGANPNQVREIVWLDRGG 584

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                +   +    F    SP++ K+ Y+         ++L D       +R        
Sbjct: 585 KRGMPVLKQKGITDF--ALSPDRTKLLYSLATQYVAGDLWLRDVARG-VSQRFTFGPFSA 641

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVF 318
             P +S +   A  +   ++ +    VD       ++  TNT       S+S D+  + F
Sbjct: 642 YTPIWSPDSSTAAFTAFPEDRLYAKRVDSAKEEAWKISATNTYAS----SWSADAKLLAF 697

Query: 319 E-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-- 375
             S    K+ L+++   G  + RI +    +      SP G  + ++     +  I +  
Sbjct: 698 SQSGVTTKDDLWLLPLEGDRKPRIFKQTPYNERSGQISPDGRWMLYSSDPSGRLEIYIEL 757

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +   G+Q ++ VE     +P W   GR L F   +       + ++D+    E    TP 
Sbjct: 758 IAPGGAQRQISVEGGF--SPRWRADGRELYFISDR------AMMAVDVTPGPELTFGTPH 809

Query: 436 Y-ASDPQ 441
               +P 
Sbjct: 810 ELFREPA 816



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 33/103 (32%), Gaps = 6/103 (5%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           +S+  ++ +     SP G  +AF   S     + V   D   +R          P WSP 
Sbjct: 315 LSRPGDSGFTQFQLSPDGHYLAFVDRSAAVDRLYVRALDSLDDRQFPGTDGATYPFWSPD 374

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              + F          KL  + + G   T I     A    W 
Sbjct: 375 SAHIAFFSH------GKLKQVAIAGGPPTDIADAPDARGGAWG 411



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 55/176 (31%), Gaps = 21/176 (11%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +G       +      +Y   L S    +   T        +SPDS+ I F S    
Sbjct: 328 LSPDGHYLAFVDRSAAVDRLYVRALDSLDDRQFPGTDGA-TYPFWSPDSAHIAFFS---- 382

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI---------AFTKFSGEKFAIGV 375
             +L  +   G     I+   +A      W   G ++              +G       
Sbjct: 383 HGKLKQVAIAGGPPTDIADAPDA--RGGAWGRDGSIVFAPGVTGTLVRVSGTGGGPVPLP 440

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           + + GS ER      +L+ P + P      ++ +     G  +Y   LNG     I
Sbjct: 441 LPRAGSGER-----DSLRFPAFLPDSDLFFYTIEAQTHQGEGVYVGSLNGAPPVRI 491



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 88/253 (34%), Gaps = 29/253 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAP 250
            L V   D  + R   P  D   + P +SP+   +A+ ++   + +       T I  AP
Sbjct: 346 RLYVRALDSLDDRQ-FPGTDGATY-PFWSPDSAHIAFFSHGKLKQVAIAGGPPTDIADAP 403

Query: 251 KRIGNFRSMILAPRFSSN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              G       +  F+    G    +S      + +      S   + L          +
Sbjct: 404 DARGGAWGRDGSIVFAPGVTGTLVRVSGTGGGPVPLPLPRAGSGERDSL-------RFPA 456

Query: 309 YSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD---LIAF 363
           + PDS    +  + +  +   +YV   NG+   RI  D   + F P  SP       I F
Sbjct: 457 FLPDSDLFFYTIEAQTHQGEGVYVGSLNGAPPVRILPDLSITRFVP--SPNSRTRGYILF 514

Query: 364 TKFS---GEKFAIGVMKKDG------SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            + +    + F    +K  G         +++  +      T S +G  LI++   + + 
Sbjct: 515 CRQTTLMAQAFDAASLKTAGEAFPLADDVQVVSGNKGFVDFTVSTNG-LLIYAAGANPNQ 573

Query: 415 GSKLYSIDLNGRN 427
             ++  +D  G+ 
Sbjct: 574 VREIVWLDRGGKR 586



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 72/222 (32%), Gaps = 35/222 (15%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-- 262
           +L+   D    + + SP+   +A+       + R+Y+         +    F     A  
Sbjct: 314 HLSRPGDSGFTQFQLSPDGHYLAFVDRSAA-VDRLYVRALDSLDDRQ----FPGTDGATY 368

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---- 318
           P +S +               +  V +       + +        ++  D S IVF    
Sbjct: 369 PFWSPDSAHIAFFS----HGKLKQVAIAGGPPTDIADAPDA-RGGAWGRDGS-IVFAPGV 422

Query: 319 ------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEK 370
                  S   G      +   GS ++        S   P + P  DL  +T    + + 
Sbjct: 423 TGTLVRVSGTGGGPVPLPLPRAGSGER-------DSLRFPAFLPDSDLFFYTIEAQTHQG 475

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR---SLIFSRK 409
             + V   +G+    ++ D ++     SP+ R    ++F R+
Sbjct: 476 EGVYVGSLNGAPPVRILPDLSITRFVPSPNSRTRGYILFCRQ 517


>gi|329957269|ref|ZP_08297789.1| WD40-like protein [Bacteroides clarus YIT 12056]
 gi|328522982|gb|EGF50085.1| WD40-like protein [Bacteroides clarus YIT 12056]
          Length = 1090

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 76/220 (34%), Gaps = 36/220 (16%)

Query: 254 GNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            +F     AP +      S +G     + + D    IY+V +      +LT     +   
Sbjct: 14  ASFTFAQDAPLWMRHCAISPDGTTIAFTYKGD----IYTVPVGGGRAMQLTTNPAHDTEP 69

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
            +SPDS +I F SDR G   +Y++   G + +R++     S     +S  G  I F+   
Sbjct: 70  VWSPDSKRIAFASDRMGSMDVYIVSKEGGEPRRLTT-HSGSETPVAFSDAG-HILFSADI 127

Query: 367 ----------SGEKFA-IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---------IF 406
                     S  +F  +  +  +G +  +L     ++  + +  G  L          +
Sbjct: 128 MPSAETVLFPSNGQFRQVYKVSVEGGRP-VLYSPMPMERISINKEGTILYQDKKGYEDYW 186

Query: 407 SRKKDGDTGSKLYSIDLNGRN--ETLINTPAYASDPQWVG 444
            + +       ++    + +     L        +P W  
Sbjct: 187 RKHQVSPIARDIWMYTPDEKPAYRQLTAFGGEDREPVWAP 226



 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 81/221 (36%), Gaps = 31/221 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+    D     +Y +     RA +   N  +    P +S + KR   +  
Sbjct: 30  AISPDGTTIAFTYKGD-----IYTVPVGGGRAMQLTTN-PAHDTEPVWSPDSKRIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +  +MD+Y V  +     RLT         ++S D+  I+F +D     +  +  SNG  
Sbjct: 84  RMGSMDVYIVSKEGGEPRRLTTHSGSETPVAFS-DAGHILFSADIMPSAETVLFPSNG-Q 141

Query: 338 QKRISQDKEASYFDPVWSP----------QGDLIAFTKFSGEKF-----------AIGVM 376
            +++ +         ++SP          +G ++   K   E +            I + 
Sbjct: 142 FRQVYKVSVEGGRPVLYSPMPMERISINKEGTILYQDKKGYEDYWRKHQVSPIARDIWMY 201

Query: 377 KKDGS-QERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             D     R L       + P W+P G+S  +  +++G   
Sbjct: 202 TPDEKPAYRQLTAFGGEDREPVWAPDGKSFYYLSEENGTFN 242



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 56/302 (18%), Positives = 112/302 (37%), Gaps = 40/302 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ E G FN   ++      +   +    V       +R+L+ + D  L    +  +
Sbjct: 231 FYYLSEENGTFN---VYQRTPGATSATQ----VTRHTKQPVRFLSIAADGRLC---YGYD 280

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +        +   + + ++  R D+   R             S NGK     ++ D   
Sbjct: 281 GEIYTLTPGGEPRKVNISIVSDRSDKDLIRQIKSSGATEM-ALSPNGKEVAFVLRGD--- 336

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   +    T+++TNT        ++PD   +V+ S+R G  QLY       D+K+ +
Sbjct: 337 -VYVTSVDYKTTKQITNTPCQERDVDFAPDGRSLVYASERNGLWQLYTSAIVRKDEKQFT 395

Query: 343 Q----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---- 388
                      D + + F   +SP G  +AF +      AI V+       R +++    
Sbjct: 396 YATELKEERLTDSDVTSFQLQYSPDGKEVAFLENRA---AIRVINLKTKDVRTVMDAKYQ 452

Query: 389 ---DSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP--Q 441
                  Q   WSP  + ++  F     G     +  ++ +G+ E +  T +  +D   +
Sbjct: 453 YSYSDGDQWFRWSPDSKWILSDFI-GIGGWNNKDVVLLNADGKGEMINLTESGYTDGNAK 511

Query: 442 WV 443
           WV
Sbjct: 512 WV 513



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/339 (13%), Positives = 104/339 (30%), Gaps = 87/339 (25%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    + ++   K  +  +   G     LT +      EP +SP+ +++A+A+      +
Sbjct: 31  ISPDGTTIAFTYKGDIYTVPVGGGRAMQLTTNPAH-DTEPVWSPDSKRIAFASDRMGS-M 88

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPR--------FSSN--------------------- 268
            VY++ ++    P+R+                   FS++                     
Sbjct: 89  DVYIV-SKEGGEPRRLTTHSGSETPVAFSDAGHILFSADIMPSAETVLFPSNGQFRQVYK 147

Query: 269 -----GKRALIS--------VQKDE----------------------AMDIYSVDLQSNA 293
                G+  L S        + K+                       A DI+        
Sbjct: 148 VSVEGGRPVLYSPMPMERISINKEGTILYQDKKGYEDYWRKHQVSPIARDIWMYTPDEKP 207

Query: 294 T-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              +LT     +    ++PD     + S+  G   +Y      +   ++++  +      
Sbjct: 208 AYRQLTAFGGEDREPVWAPDGKSFYYLSEENGTFNVYQRTPGATSATQVTRHTKQPVRFL 267

Query: 353 VWSPQGDL------IAFTKFSGE---KFAIGVM--KKDGSQERLLVEDSNLQAPTWSPSG 401
             +  G L        +T   G    K  I ++  + D    R +      +    SP+G
Sbjct: 268 SIAADGRLCYGYDGEIYTLTPGGEPRKVNISIVSDRSDKDLIRQIKSSGATEM-ALSPNG 326

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASD 439
           + + F  +        +Y   ++ +  + + NTP    D
Sbjct: 327 KEVAFVLR------GDVYVTSVDYKTTKQITNTPCQERD 359



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 39/106 (36%), Gaps = 9/106 (8%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSG 401
           QD          SP G  IAFT        I  +   G +  +L    ++   P WSP  
Sbjct: 20  QDAPLWMRHCAISPDGTTIAFTYKGD----IYTVPVGGGRAMQLTTNPAHDTEPVWSPDS 75

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           + + F+  + G     +Y +   G     + T + +  P  V F D
Sbjct: 76  KRIAFASDRMGSM--DVYIVSKEGGEPRRLTTHSGSETP--VAFSD 117



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 46/123 (37%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
               D   F+ ++SP+ ++VA+        ++ +   D R     K   ++       R+
Sbjct: 405 LTDSDVTSFQLQYSPDGKEVAFLENRAAIRVINLKTKDVRTVMDAKYQYSYSDGDQWFRW 464

Query: 266 SSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K  L            D+  ++         LT + + + +A +      +++ SD
Sbjct: 465 SPDSKWILSDFIGIGGWNNKDVVLLNADGKGEMINLTESGYTDGNAKWVLGGKAMIWTSD 524

Query: 322 REG 324
           R G
Sbjct: 525 RAG 527



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 62/172 (36%), Gaps = 27/172 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDT----------RIDRAPKRIGNFRSMILAPRFSSN 268
           F+P+ + + YA+  +  + ++Y                +   +R+ +        ++S +
Sbjct: 362 FAPDGRSLVYASERNG-LWQLYTSAIVRKDEKQFTYATELKEERLTDSDVTSFQLQYSPD 420

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDR 322
           GK       +     I  ++L++     + +  +       +    +SPDS  I+  SD 
Sbjct: 421 GKEVAFLENR---AAIRVINLKTKDVRTVMDAKYQYSYSDGDQWFRWSPDSKWIL--SDF 475

Query: 323 EG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            G      + + ++ ++G  +     +   +  +  W   G  + +T     
Sbjct: 476 IGIGGWNNKDVVLLNADGKGEMINLTESGYTDGNAKWVLGGKAMIWTSDRAG 527


>gi|284106150|ref|ZP_06386248.1| WD40-like Beta Propeller protein [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283830085|gb|EFC34353.1| WD40-like Beta Propeller protein [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 245

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 68/193 (35%), Gaps = 29/193 (15%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAY------ATYDDEDILRVYLMDTRIDRAPKRIGN 255
           NIR LT           FS +  ++ +      A+       ++Y+MD        R+  
Sbjct: 43  NIRQLTAGGKNAEAY--FSFDGSRLIFQSTKDPASQTLGACYQIYVMDLE-GENIHRVST 99

Query: 256 FRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVD--------LQSNATER 296
                    F   G+R L S             K      + +D        L     +R
Sbjct: 100 GYGTTTCGYFFPGGRRVLYSSTHLAGLQCPPKPKRGPKYRWVLDDHDIFSARLDGRELQR 159

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT +   +  A+ SP+  ++VF S R+G   LY M  +G+  KR++ D         +SP
Sbjct: 160 LTFSPGYDAEATVSPNGRKVVFTSVRDGDIDLYAMNIDGTGVKRLT-DDVGYDGGAFYSP 218

Query: 357 QGDLIAFTKFSGE 369
               I +     +
Sbjct: 219 DSKRIVYRAQHPK 231



 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 63/186 (33%), Gaps = 28/186 (15%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLFIN 304
           R            FS +G R +    KD A         IY +DL+     R++      
Sbjct: 45  RQLTAGGKNAEAYFSFDGSRLIFQSTKDPASQTLGACYQIYVMDLEGENIHRVSTGYGTT 104

Query: 305 ISASYSPDSSQIVFESD------------REGKEQ-------LYVMQSNGSDQKRISQDK 345
               + P   ++++ S             R  K +       ++  + +G + +R++   
Sbjct: 105 TCGYFFPGGRRVLYSSTHLAGLQCPPKPKRGPKYRWVLDDHDIFSARLDGRELQRLTF-S 163

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSL 404
                +   SP G  + FT        +  M  DG+  + L +D        +SP  + +
Sbjct: 164 PGYDAEATVSPNGRKVVFTSVRDGDIDLYAMNIDGTGVKRLTDDVGYDGGAFYSPDSKRI 223

Query: 405 IFSRKK 410
           ++  + 
Sbjct: 224 VYRAQH 229



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 69/173 (39%), Gaps = 21/173 (12%)

Query: 175 SRILFVSESVVSGIIK---NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           SR++F S    +         + VMD +G NI  ++           F P  ++V Y++ 
Sbjct: 63  SRLIFQSTKDPASQTLGACYQIYVMDLEGENIHRVSTGYGTTTCG-YFFPGGRRVLYSST 121

Query: 232 D----------DEDILRVYLMDTRI-------DRAPKRIGNFRSMILAPRFSSNGKRALI 274
                             +++D           R  +R+            S NG++ + 
Sbjct: 122 HLAGLQCPPKPKRGPKYRWVLDDHDIFSARLDGRELQRLTFSPGYDAEATVSPNGRKVVF 181

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +  +D  +D+Y++++     +RLT+ +  +  A YSPDS +IV+ +      +
Sbjct: 182 TSVRDGDIDLYAMNIDGTGVKRLTDDVGYDGGAFYSPDSKRIVYRAQHPKTPE 234



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 31/168 (18%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGK-------EQLYVMQSNGSDQKRISQD 344
               +LT     N  A +S D S+++F+S ++          Q+YVM   G +  R+S  
Sbjct: 42  RNIRQLTAG-GKNAEAYFSFDGSRLIFQSTKDPASQTLGACYQIYVMDLEGENIHRVST- 99

Query: 345 KEASYFDPVWSPQGDLIAFTKF------------SGEKFA-------IGVMKKDGSQERL 385
              +     + P G  + ++               G K+        I   + DG + + 
Sbjct: 100 GYGTTTCGYFFPGGRRVLYSSTHLAGLQCPPKPKRGPKYRWVLDDHDIFSARLDGRELQR 159

Query: 386 LV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           L          T SP+GR ++F+  +DGD    LY+++++G     + 
Sbjct: 160 LTFSPGYDAEATVSPNGRKVVFTSVRDGD--IDLYAMNIDGTGVKRLT 205



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 5/59 (8%)

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-----KLYSIDLNGRNETLINTP 434
              R L          +S  G  LIF   KD  + +     ++Y +DL G N   ++T 
Sbjct: 42  RNIRQLTAGGKNAEAYFSFDGSRLIFQSTKDPASQTLGACYQIYVMDLEGENIHRVSTG 100


>gi|262198502|ref|YP_003269711.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262081849|gb|ACY17818.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1684

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 107/265 (40%), Gaps = 15/265 (5%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            SV++  + +S  V + +GA    +       +    FSP+ ++VA A+ D    +     
Sbjct: 1064 SVLTASVDHSARVWNANGAGEPLVLEGHTDEVVSAVFSPDGERVATASADGRARVWSVRA 1123

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                      +      + A  FS +G+R +++   D    ++S D  + A   L     
Sbjct: 1124 VVAGRAKSVTLRGHTGPVRAVAFSPDGER-VVTASADGTARVWSAD-GTGAAVVLRGHSD 1181

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               + S+SPD  ++V  +  +G  +++   ++GS +  + +  +    D  +SP G+ +A
Sbjct: 1182 QIRAVSFSPDGERVV-TASADGTARVW--SADGSGEPVVLRGHQGWVVDVCFSPDGERVA 1238

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               F      + +    G    L     ++ +  +SP G  ++ +     D  ++ +  D
Sbjct: 1239 TASFDNSA-RVWLADGSGEPVVLAGHTQSVASVRFSPEGERVVTASY---DKTARAWPAD 1294

Query: 423  LNGRNET------LINTPAYASDPQ 441
              G +        L+ T A++ D +
Sbjct: 1295 GLGTSVLFQGHGGLVRTAAFSGDGE 1319



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 102/296 (34%), Gaps = 27/296 (9%)

Query: 138  QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
             ++ +   +  A      H   D +Y +    +G          E VV+     +  + D
Sbjct: 989  MLVSRALRTGVARAVLSGHE--DQVYAAAFSPEG----------ERVVTAGWDGTARIWD 1036

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             DG     +       +    FSP+   V  A+ D        + +      P  +    
Sbjct: 1037 ADGVGTPVVLRGHTGRINAVHFSPDGTSVLTASVDH----SARVWNANGAGEPLVLEGHT 1092

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLT--NTLFINISASYSPDSS 314
              +++  FS +G+R   +   D    ++SV  + +   + +T         + ++SPD  
Sbjct: 1093 DEVVSAVFSPDGERVA-TASADGRARVWSVRAVVAGRAKSVTLRGHTGPVRAVAFSPDGE 1151

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            ++V  +  +G  +++   ++G+    + +          +SP G+ +      G    + 
Sbjct: 1152 RVV-TASADGTARVW--SADGTGAAVVLRGHSDQIRAVSFSPDGERVVTASADGTA-RVW 1207

Query: 375  VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                 G    L      +    +SP G  +  +     D  ++++  D +G    L
Sbjct: 1208 SADGSGEPVVLRGHQGWVVDVCFSPDGERVATAS---FDNSARVWLADGSGEPVVL 1260



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 86/260 (33%), Gaps = 15/260 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     +  +   DG +   +       L    F P+ +++  +++D        +    
Sbjct: 1365 SASADGTARLWRLDGGDAPVVFEGHAGALTGAMFDPSGERIVTSSFDK----TARVWTLG 1420

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             D AP  +      +    FS +G+    +   D  + ++  D  S  +  +       +
Sbjct: 1421 SDAAPVVLEGHTGWLSEAVFSPDGRSVA-TASSDGTVRLW--DAGSGRSSAVFRGHAGEV 1477

Query: 306  SAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
                +SPD +++V  S     +   V      + + +     +  +   +S  G  I  T
Sbjct: 1478 MNVGFSPDGARLVSAS---ADQSARVWTVAEPEAEPLVFGHPSVVYSASFSADGRYIV-T 1533

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                    +           L     +L + ++SP GR ++ + +   D  + ++ ++  
Sbjct: 1534 AADDGVARVWAADGRSQPRTLRGHADSLTSASFSPDGRRVVTASR---DRSAWIWDLEGE 1590

Query: 425  GRNETLINTPAYASDPQWVG 444
            G    L   P +     +  
Sbjct: 1591 GAPLVLDGHPGWVGQAVFSP 1610



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 102/279 (36%), Gaps = 15/279 (5%)

Query: 134  KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNS 192
             D  Q++      +   WR      +  +++   G  G     +   S E +V+     +
Sbjct: 1358 ADGAQLLSASADGTARLWRLDGGD-APVVFE---GHAGALTGAMFDPSGERIVTSSFDKT 1413

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
              V          +       L E  FSP+ + VA A+ D      V L D    R+   
Sbjct: 1414 ARVWTLGSDAAPVVLEGHTGWLSEAVFSPDGRSVATASSDG----TVRLWDAGSGRSSAV 1469

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                   ++   FS +G R + S   D++  +++V  +  A   +     +  SAS+S D
Sbjct: 1470 FRGHAGEVMNVGFSPDGARLV-SASADQSARVWTV-AEPEAEPLVFGHPSVVYSASFSAD 1527

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               IV  +D +G  +++   ++G  Q R  +    S     +SP G  +         + 
Sbjct: 1528 GRYIVTAAD-DGVARVWA--ADGRSQPRTLRGHADSLTSASFSPDGRRVVTASRDRSAW- 1583

Query: 373  IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            I  ++ +G+   L      +    +SP GR +  S    
Sbjct: 1584 IWDLEGEGAPLVLDGHPGWVGQAVFSPDGRRVATSASDG 1622



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 97/290 (33%), Gaps = 24/290 (8%)

Query: 85   DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
             +   ++ +  +    + W   G    V   V +     L      +D    ++I+   F
Sbjct: 1357 SADGAQLLSASADGTARLWRLDGGDAPV---VFEGHAGALTGAM--FDP-SGERIVTSSF 1410

Query: 145  FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGAN 202
              +   W     T+  D    +      + S  +F     SV +     ++ + D     
Sbjct: 1411 DKTARVW-----TLGSDAAPVVLEGHTGWLSEAVFSPDGRSVATASSDGTVRLWDAGSGR 1465

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
               +       +    FSP+  ++  A+ D        +       A   +    S++ +
Sbjct: 1466 SSAVFRGHAGEVMNVGFSPDGARLVSASADQ----SARVWTVAEPEAEPLVFGHPSVVYS 1521

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-D 321
              FS++G+  + +   D    +++ D +S     L        SAS+SPD  ++V  S D
Sbjct: 1522 ASFSADGRYIV-TAADDGVARVWAADGRS-QPRTLRGHADSLTSASFSPDGRRVVTASRD 1579

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            R      ++    G     +           V+SP G  +A +   G  +
Sbjct: 1580 RS----AWIWDLEGEGAPLVLDGHPGWVGQAVFSPDGRRVATSASDGSIW 1625



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 88/231 (38%), Gaps = 12/231 (5%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            E V +    NS  V   DG+    +     Q +   RFSP  ++V  A+YD     R + 
Sbjct: 1235 ERVATASFDNSARVWLADGSGEPVVLAGHTQSVASVRFSPEGERVVTASYD--KTARAWP 1292

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-T 300
             D               ++    FS +G+R +++  +D    ++    +     ++ +  
Sbjct: 1293 ADGLGTSV--LFQGHGGLVRTAAFSGDGER-VVTASEDGTARVWK--ARGVPQPQVVHAH 1347

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S  +S D +Q++  S  +G  +L+ +  +G D   + +    +    ++ P G+ 
Sbjct: 1348 QGAVYSMMFSADGAQLLSAS-ADGTARLWRL--DGGDAPVVFEGHAGALTGAMFDPSGER 1404

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            I  + F      +  +  D +   L      L    +SP GRS+  +    
Sbjct: 1405 IVTSSFDKTA-RVWTLGSDAAPVVLEGHTGWLSEAVFSPDGRSVATASSDG 1454



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 9/111 (8%)

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             V   DG +           L    FSP+ ++V  A+ D       ++ D   + AP  +
Sbjct: 1541 RVWAADGRSQPRTLRGHADSLTSASFSPDGRRVVTASRDR----SAWIWDLEGEGAPLVL 1596

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYS----VDLQSNATERLTNT 300
                  +    FS +G+R   S   D ++ ++S    + + ++A  R T+ 
Sbjct: 1597 DGHPGWVGQAVFSPDGRRVATSAS-DGSIWLWSDVAPIAVDTDALWRATSY 1646


>gi|116327580|ref|YP_797300.1| Tol transport system component [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116120324|gb|ABJ78367.1| Tol transport system component [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 2587

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/266 (19%), Positives = 100/266 (37%), Gaps = 49/266 (18%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--- 278
           + + + Y T   +    ++  D +       +    +    P  S +G + +   ++   
Sbjct: 65  DGRYLFYTT-GQKGNYDIWFRDLK-SSITVPVTAHPAPEFKPAISPDGTKLVFVSEQYDS 122

Query: 279 DEAMDIYSVD--------LQSNATER-----LTNTLF---------INISASYSPDSSQI 316
              + +  ++        L+           LTN+ F         ++    ++PD   +
Sbjct: 123 SGDLVLLEMNPGLWAEKILEGKRFINSDFIILTNSNFDVPGKKDSNVDTDPFFAPDCRHL 182

Query: 317 VFESDR--EGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKF----SGE 369
           VF +DR   G + L V+ + G +  K ++Q+  AS   PVWS  G  I +  +    SG+
Sbjct: 183 VFSTDRLTPGIQNLVVLDTEGKEPMKLLTQNGGAS---PVWSSDGKSIVYLSYQENPSGD 239

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-----KKDGDT----GSKLYS 420
            + + +M   G  ERL  +     +P+ S   R L ++       K+G       S +  
Sbjct: 240 VYLLDLMS--GKSERLTKDSYLNFSPSLSDDKRYLYYTSIQNDTNKNGRLDERDNSLIIR 297

Query: 421 IDL-NGRNETLINTPAYASDPQWVGF 445
            DL  G    L +      D ++  F
Sbjct: 298 KDLRTGEVRRLTSGNDSLFDSRFSSF 323



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 88/225 (39%), Gaps = 28/225 (12%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T  +  P  +   R   L    +++G+    +  +    DI+  DL+S+ T  +T     
Sbjct: 41  TPENEKPFPLTVQRGNNLYNSTTADGRYLFYTTGQKGNYDIWFRDLKSSITVPVTAHPAP 100

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEAS------------ 348
               + SPD +++VF S   D  G   L  M      +K +   +  +            
Sbjct: 101 EFKPAISPDGTKLVFVSEQYDSSGDLVLLEMNPGLWAEKILEGKRFINSDFIILTNSNFD 160

Query: 349 ---------YFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                      DP ++P    + F+  + +     + V+  +G +   L+  +   +P W
Sbjct: 161 VPGKKDSNVDTDPFFAPDCRHLVFSTDRLTPGIQNLVVLDTEGKEPMKLLTQNGGASPVW 220

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQ 441
           S  G+S+++   ++  +G  +Y +DL +G++E L         P 
Sbjct: 221 SSDGKSIVYLSYQENPSG-DVYLLDLMSGKSERLTKDSYLNFSPS 264



 Score = 96.2 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 78/196 (39%), Gaps = 13/196 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +N          +  +P F+P+ + + ++T      ++  ++     + P ++       
Sbjct: 157 SNFDVPGKKDSNVDTDPFFAPDCRHLVFSTDRLTPGIQNLVVLDTEGKEPMKLLTQNGGA 216

Query: 261 LAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            +P +SS+GK  +  S Q++ + D+Y +DL S  +ERLT   ++N S S S D   + + 
Sbjct: 217 -SPVWSSDGKSIVYLSYQENPSGDVYLLDLMSGKSERLTKDSYLNFSPSLSDDKRYLYYT 275

Query: 320 S-----------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           S           D      +        + +R++   ++ +     S  G  I FT    
Sbjct: 276 SIQNDTNKNGRLDERDNSLIIRKDLRTGEVRRLTSGNDSLFDSRFSSFNGGSILFTAAYY 335

Query: 369 EKFAIGVMKKDGSQER 384
               I  +   G+  +
Sbjct: 336 NTLNIYFIPASGAVPK 351



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 97/292 (33%), Gaps = 49/292 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + R LF +           +   D   ++I     +     F+P  SP+  K+ + +   
Sbjct: 65  DGRYLFYTT---GQKGNYDIWFRDLK-SSITVPVTAHPAPEFKPAISPDGTKLVFVSEQY 120

Query: 234 EDILRVYLMDTRIDRAPKRIGNFR-----------------------SMILAPRFSSNGK 270
           +    + L++       ++I   +                       ++   P F+ + +
Sbjct: 121 DSSGDLVLLEMNPGLWAEKILEGKRFINSDFIILTNSNFDVPGKKDSNVDTDPFFAPDCR 180

Query: 271 RALISVQK--DEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREG-KE 326
             + S  +      ++  +D +     + LT       S  +S D   IV+ S +E    
Sbjct: 181 HLVFSTDRLTPGIQNLVVLDTEGKEPMKLLTQNGG--ASPVWSSDGKSIVYLSYQENPSG 238

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-----------EKFAIGV 375
            +Y++       +R+++D   + F P  S     + +T               +   I  
Sbjct: 239 DVYLLDLMSGKSERLTKDSYLN-FSPSLSDDKRYLYYTSIQNDTNKNGRLDERDNSLIIR 297

Query: 376 MKKDGSQERLLVEDSNLQAPT-WSP-SGRSLIFSRKKDGDTGSKLYSIDLNG 425
                 + R L   ++    + +S  +G S++F+          +Y I  +G
Sbjct: 298 KDLRTGEVRRLTSGNDSLFDSRFSSFNGGSILFTAAYYNT--LNIYFIPASG 347



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 53/177 (29%), Gaps = 27/177 (15%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               LT     N+  S + D   + + + ++G   ++      S    ++    A  F P
Sbjct: 46  KPFPLTVQRGNNLYNSTTADGRYLFYTTGQKGNYDIWFRDLKSSITVPVT-AHPAPEFKP 104

Query: 353 VWSPQGDLIAFTK---FSGEKFAIGVMKKD-------------GSQERLLVEDSN----- 391
             SP G  + F      S     +  M                 S   +L   +      
Sbjct: 105 AISPDGTKLVFVSEQYDSSGDLVLLEMNPGLWAEKILEGKRFINSDFIILTNSNFDVPGK 164

Query: 392 -----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
                   P ++P  R L+FS  +       L  +D  G+    + T    + P W 
Sbjct: 165 KDSNVDTDPFFAPDCRHLVFSTDRLTPGIQNLVVLDTEGKEPMKLLTQNGGASPVWS 221



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 69/176 (39%), Gaps = 17/176 (9%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            ++F ++ +  GI    L V+D +G     L          P +S + + + Y +Y +  
Sbjct: 181 HLVFSTDRLTPGIQN--LVVLDTEGKEPMKLLTQNGGA--SPVWSSDGKSIVYLSYQENP 236

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-----------I 284
              VYL+D    +  +R+     +  +P  S + +    +  +++              I
Sbjct: 237 SGDVYLLDLMSGK-SERLTKDSYLNFSPSLSDDKRYLYYTSIQNDTNKNGRLDERDNSLI 295

Query: 285 YSVDLQSNATERLTNTLFINISASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQK 339
              DL++    RLT+       + +S  +   I+F +       +Y + ++G+  K
Sbjct: 296 IRKDLRTGEVRRLTSGNDSLFDSRFSSFNGGSILFTAAYYNTLNIYFIPASGAVPK 351


>gi|186682497|ref|YP_001865693.1| hypothetical protein Npun_R2146 [Nostoc punctiforme PCC 73102]
 gi|186464949|gb|ACC80750.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1084

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 63/344 (18%), Positives = 127/344 (36%), Gaps = 55/344 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           G++I  G DR     RLW++    + ++IG+                 + +        G
Sbjct: 676 GKLIISGGDR---TVRLWELHQILQDRVIGRSQR-----------KYENWVNSVAFSPDG 721

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +          +VS    +++ + D +G          ++ +    FSP+ Q +  A+ 
Sbjct: 722 QW----------IVSASNDSTIRLWDSNGNPTGQPWQGHEKEVNSVAFSPDGQWIVSASN 771

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D      + L D+  +   +        + +  FS +G+  + S   D  + ++  D   
Sbjct: 772 DS----TIRLWDSNGNPIGQPWQGHEKEVNSVAFSPDGQWIV-SASNDSTIRLW--DSNG 824

Query: 292 NATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           N   +        + S ++SPD   IV  S+      + +  SNG+   +  Q  E    
Sbjct: 825 NPIGQPWQGHEKEVNSVAFSPDGQWIVSASN---DSTVRLWDSNGNPTGQPWQGHEKEVN 881

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSR 408
              +SP G  I           I +   +G+      +    +  +  +SP G+ +I + 
Sbjct: 882 SVAFSPDGQWIISASNDST---IRLWDSNGNPIGQPWQGHEKEVNSVAFSPDGQWIISAS 938

Query: 409 KKDGDTGSKLYSIDLNG--------RNETLINTPAYASDPQWVG 444
               D+  +L+  D NG         +E  +N+ A++ D QW+ 
Sbjct: 939 N---DSTIRLW--DSNGNPIGQPWRGHEYWVNSAAFSPDGQWIA 977



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 102/273 (37%), Gaps = 34/273 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + + +G +I       +  +    FSP+ + +            V L +  
Sbjct: 639 SGSCDRTIRLWNINGNSITQTWRGHEGEVNSLAFSPDGKLII-----SGGDRTVRLWELH 693

Query: 246 IDRAPKRIGN----FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ-SNATERLTNT 300
                + IG     + + + +  FS +G+  + S   D  + ++  +   +    +    
Sbjct: 694 QILQDRVIGRSQRKYENWVNSVAFSPDGQWIV-SASNDSTIRLWDSNGNPTGQPWQ--GH 750

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD   IV  S+      + +  SNG+   +  Q  E       +SP G  
Sbjct: 751 EKEVNSVAFSPDGQWIVSASN---DSTIRLWDSNGNPIGQPWQGHEKEVNSVAFSPDGQW 807

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKL 418
           I           I +   +G+      +    +  +  +SP G+ ++ +     D+  +L
Sbjct: 808 IVSASNDST---IRLWDSNGNPIGQPWQGHEKEVNSVAFSPDGQWIVSASN---DSTVRL 861

Query: 419 YSIDLNG--------RNETLINTPAYASDPQWV 443
           +  D NG         +E  +N+ A++ D QW+
Sbjct: 862 W--DSNGNPTGQPWQGHEKEVNSVAFSPDGQWI 892



 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 102/275 (37%), Gaps = 36/275 (13%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG   +++ + D  G  I       +  +    FSP+ + +   + D      + L + 
Sbjct: 596 VSGGSDSTVRLWDIQGNPIGQPWHGHEGHVNSVAFSPDGKFIISGSCDR----TIRLWNI 651

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV------DLQSNATERLT 298
             +   +        + +  FS +GK  LI    D  + ++ +       +   +  +  
Sbjct: 652 NGNSITQTWRGHEGEVNSLAFSPDGK--LIISGGDRTVRLWELHQILQDRVIGRSQRK-- 707

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  S ++SPD   IV  S+      + +  SNG+   +  Q  E       +SP G
Sbjct: 708 -YENWVNSVAFSPDGQWIVSASN---DSTIRLWDSNGNPTGQPWQGHEKEVNSVAFSPDG 763

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGS 416
             I           I +   +G+      +    +  +  +SP G+ ++ +     D+  
Sbjct: 764 QWIVSASNDST---IRLWDSNGNPIGQPWQGHEKEVNSVAFSPDGQWIVSASN---DSTI 817

Query: 417 KLYSIDLNG--------RNETLINTPAYASDPQWV 443
           +L+  D NG         +E  +N+ A++ D QW+
Sbjct: 818 RLW--DSNGNPIGQPWQGHEKEVNSVAFSPDGQWI 850



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 107/276 (38%), Gaps = 34/276 (12%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S+VS     ++C+ D  G  I        + +    FSPN   +    +D      V L 
Sbjct: 510 SIVSVGFDGTVCLWDLQGNAITQPWRGHKEGVISVAFSPNGDCIISVGFDG----TVCLW 565

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTL 301
           D   +   +      + I+   FS + ++ ++S   D  + ++  D+Q N   +      
Sbjct: 566 DLEGNTITQPWHKHEAKIICATFSPD-RKFIVSGGSDSTVRLW--DIQGNPIGQPWHGHE 622

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               S ++SPD   I+  S DR     + +   NG+   +  +  E       +SP G L
Sbjct: 623 GHVNSVAFSPDGKFIISGSCDRT----IRLWNINGNSITQTWRGHEGEVNSLAFSPDGKL 678

Query: 361 IAFTKFSGEKFAIG-----VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           I           +      +  +   + +   E+  + +  +SP G+ ++ +     D+ 
Sbjct: 679 I--ISGGDRTVRLWELHQILQDRVIGRSQRKYENW-VNSVAFSPDGQWIVSASN---DST 732

Query: 416 SKLYSIDLNG--------RNETLINTPAYASDPQWV 443
            +L+  D NG         +E  +N+ A++ D QW+
Sbjct: 733 IRLW--DSNGNPTGQPWQGHEKEVNSVAFSPDGQWI 766



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 88/257 (34%), Gaps = 36/257 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ I    +   +  RLWD              +P       H    ++        G +
Sbjct: 763 GQWIVSASNDSTI--RLWDSN-----------GNPIGQPWQGHE--KEVNSVAFSPDGQW 807

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     +VS    +++ + D +G  I       ++ +    FSP+ Q +  A+ D 
Sbjct: 808 ----------IVSASNDSTIRLWDSNGNPIGQPWQGHEKEVNSVAFSPDGQWIVSASNDS 857

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                V L D+  +   +        + +  FS +G+   IS   D  + ++  D   N 
Sbjct: 858 ----TVRLWDSNGNPTGQPWQGHEKEVNSVAFSPDGQWI-ISASNDSTIRLW--DSNGNP 910

Query: 294 TERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             +        + S ++SPD   I+  S+      + +  SNG+   +  +  E      
Sbjct: 911 IGQPWQGHEKEVNSVAFSPDGQWIISASN---DSTIRLWDSNGNPIGQPWRGHEYWVNSA 967

Query: 353 VWSPQGDLIAFTKFSGE 369
            +SP G  IA     G 
Sbjct: 968 AFSPDGQWIASGSLDGT 984



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 105/317 (33%), Gaps = 72/317 (22%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD------------- 232
           SG   ++LC+ +  G          +Q +    FSP+ + +A  + D             
Sbjct: 421 SGSSDSTLCLWNIIGNPTAQFLCGHEQEVNCIAFSPDGKFIASGSIDGILCLWDLQGNLI 480

Query: 233 ------------------------DEDILRVY---------LMDTRIDRAPKRIGNFRSM 259
                                   +   + +          L D + +   +     +  
Sbjct: 481 TQPWQGHEEGVISVAFSPNSDGCANPSGVSIVSVGFDGTVCLWDLQGNAITQPWRGHKEG 540

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVF 318
           +++  FS NG   +ISV  D  + ++  DL+ N   +         I A++SPD     F
Sbjct: 541 VISVAFSPNGD-CIISVGFDGTVCLW--DLEGNTITQPWHKHEAKIICATFSPDRK---F 594

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                    + +    G+   +     E       +SP G  I           I +   
Sbjct: 595 IVSGGSDSTVRLWDIQGNPIGQPWHGHEGHVNSVAFSPDGKFIISGSCDRT---IRLWNI 651

Query: 379 DGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI------DLNGRNETL 430
           +G+         +  + +  +SP G+ +I      GD   +L+ +       + GR++  
Sbjct: 652 NGNSITQTWRGHEGEVNSLAFSPDGKLII----SGGDRTVRLWELHQILQDRVIGRSQRK 707

Query: 431 ----INTPAYASDPQWV 443
               +N+ A++ D QW+
Sbjct: 708 YENWVNSVAFSPDGQWI 724



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 82/229 (35%), Gaps = 27/229 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +Q +    FSP+ + +A  + D      + L +   +   + +      +    FS
Sbjct: 400 LRGHEQEVNCVAFSPDGKFIASGSSDS----TLCLWNIIGNPTAQFLCGHEQEVNCIAFS 455

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
            +GK    S   D  + ++  DLQ N   +         IS ++SP+S      ++  G 
Sbjct: 456 PDGKFIA-SGSIDGILCLW--DLQGNLITQPWQGHEEGVISVAFSPNSDG---CANPSGV 509

Query: 326 EQLYV--------MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             + V            G+   +  +  +       +SP GD I    F G    + +  
Sbjct: 510 SIVSVGFDGTVCLWDLQGNAITQPWRGHKEGVISVAFSPNGDCIISVGFDGT---VCLWD 566

Query: 378 KDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +G+         ++ +   T+SP  + ++       D+  +L+ I  N
Sbjct: 567 LEGNTITQPWHKHEAKIICATFSPDRKFIV---SGGSDSTVRLWDIQGN 612



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 39/121 (32%), Gaps = 14/121 (11%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD     F +       L +    G+   +     E       +SP G  IA     
Sbjct: 411 AFSPDGK---FIASGSSDSTLCLWNIIGNPTAQFLCGHEQEVNCIAFSPDGKFIASGSID 467

Query: 368 GEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G    + +    G+      +     + +  +SP+      S      +G  + S+  +G
Sbjct: 468 G---ILCLWDLQGNLITQPWQGHEEGVISVAFSPN------SDGCANPSGVSIVSVGFDG 518

Query: 426 R 426
            
Sbjct: 519 T 519


>gi|115443476|ref|XP_001218545.1| hypothetical protein ATEG_09923 [Aspergillus terreus NIH2624]
 gi|114188414|gb|EAU30114.1| hypothetical protein ATEG_09923 [Aspergillus terreus NIH2624]
          Length = 1316

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 55/300 (18%), Positives = 100/300 (33%), Gaps = 45/300 (15%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            V      RL          RLWD       + +      +S + +A             
Sbjct: 653 SVAFSPDGRLLASGSHDKTVRLWDPATGA--LQQTLKGHTSSVQSVA-----------FS 699

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G   +          SG    ++ V D    + +         +    FSP+ + +A 
Sbjct: 700 PDGRLLT----------SGSSDKTVRVWDPATGSSQQTLEGHTNWVLSVAFSPDGRLLAS 749

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           A+ D      + + D       + +    + +L+  FS +G R L S   D+ + ++  D
Sbjct: 750 ASDDK----TIRVWDPVTGALQQTLKGHTNSVLSVTFSPDG-RLLTSGSSDKTIRVW--D 802

Query: 289 LQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             + A ++ L        SA++SPD   +   SD    + + V        ++  +    
Sbjct: 803 PATGALQQTLNGHTSWIQSAAFSPDGRLLASGSD---DKTIRVWDPATGALQQTLKGYTK 859

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
           S     +SP G L+A          I V        +  +    S +Q+  +SP GR L 
Sbjct: 860 SVLSVTFSPDGRLLASGSNDKT---IRVWDPATGALQQTLNGHTSWIQSVAFSPDGRLLA 916



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 84/223 (37%), Gaps = 16/223 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ V D     ++         +    FSP+ + +A  + D      + + D  
Sbjct: 791  SGSSDKTIRVWDPATGALQQTLNGHTSWIQSAAFSPDGRLLASGSDDK----TIRVWDPA 846

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                 + +  +   +L+  FS +G+    S   D+ + ++  D  + A ++ L       
Sbjct: 847  TGALQQTLKGYTKSVLSVTFSPDGRLLA-SGSNDKTIRVW--DPATGALQQTLNGHTSWI 903

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++SPD   +   S     E + +     +  ++  +    S     +SP G L+A  
Sbjct: 904  QSVAFSPDGRLLASGSS---DETIRIWDPATATLQQTLKGHTKSVLSVTFSPDGRLLASG 960

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLI 405
             +      I V        +  ++    ++++ T+SP GR L 
Sbjct: 961  SYDKT---IRVWDPATGALQQTLKGRIDSVRSVTFSPDGRLLA 1000



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 75/204 (36%), Gaps = 16/204 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    FSP+ + +A  ++D      V L D       + +    S + +  
Sbjct: 642 QTLEGHTSSVQSVAFSPDGRLLASGSHDK----TVRLWDPATGALQQTLKGHTSSVQSVA 697

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G R L S   D+ + ++  D  + ++++ L       +S ++SPD   +   SD  
Sbjct: 698 FSPDG-RLLTSGSSDKTVRVW--DPATGSSQQTLEGHTNWVLSVAFSPDGRLLASASD-- 752

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + V        ++  +    S     +SP G L+           I V        
Sbjct: 753 -DKTIRVWDPVTGALQQTLKGHTNSVLSVTFSPDGRLLTSGSSDKT---IRVWDPATGAL 808

Query: 384 RLLV--EDSNLQAPTWSPSGRSLI 405
           +  +    S +Q+  +SP GR L 
Sbjct: 809 QQTLNGHTSWIQSAAFSPDGRLLA 832



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 60/383 (15%), Positives = 125/383 (32%), Gaps = 75/383 (19%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDR---KQIIG-----KKFFSSPASWRKIAHTISD 160
             V      RL          R+WD       + + G     +    SP   R +A   SD
Sbjct: 863  SVTFSPDGRLLASGSNDKTIRVWDPATGALQQTLNGHTSWIQSVAFSPDG-RLLASGSSD 921

Query: 161  DIYQ-------SITGEKGDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTP 208
            +  +       ++          +L V+ S       SG    ++ V D     ++    
Sbjct: 922  ETIRIWDPATATLQQTLKGHTKSVLSVTFSPDGRLLASGSYDKTIRVWDPATGALQQTLK 981

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             R   +    FSP+ + +A  + D+     + + D  I    + +      +L+  FS +
Sbjct: 982  GRIDSVRSVTFSPDGRLLASGSSDE----TIRVWDPAIGSLQRTLKGHTKSVLSVTFSPD 1037

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSS------------ 314
            G+    S   D+ + ++  D  + A ++ T    I+   S ++SPD              
Sbjct: 1038 GRLLA-SGSSDKTIRVW--DPATGALQQ-TLKGRIDSVRSVTFSPDGRLLASGSTYTALQ 1093

Query: 315  -----------QIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                        + F       +     + + V        ++  +    S     +SP 
Sbjct: 1094 RTLKGHTSWIPSLAFSPDGRLLASGSSDKTIRVWDPATGALQQTLEGHIDSVRSVTFSPD 1153

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTG 415
            G L+A          + V        +  ++    ++++ T+SP GR L        D  
Sbjct: 1154 GRLLASGSSDKT---VRVWDPATGALQQTLKGHIDSVRSVTFSPDGRLLASGSY---DET 1207

Query: 416  SKLYSIDLNGRNETLINTPAYAS 438
             +++     G  + +++T    +
Sbjct: 1208 IRVWD-PATGVLKEILSTDGAVT 1229



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 55/314 (17%), Positives = 109/314 (34%), Gaps = 47/314 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSS------PASWRKIAHTISDDIYQSI 166
            GR++  G D   +  R+WD      Q   K +  S          R +A   +D   +  
Sbjct: 828  GRLLASGSDDKTI--RVWDPATGALQQTLKGYTKSVLSVTFSPDGRLLASGSNDKTIRVW 885

Query: 167  TGEKGD----------FNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                G           +   + F  +     SG    ++ + D   A ++       + +
Sbjct: 886  DPATGALQQTLNGHTSWIQSVAFSPDGRLLASGSSDETIRIWDPATATLQQTLKGHTKSV 945

Query: 215  FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
                FSP+ + +A  +YD      + + D       + +      + +  FS +G+    
Sbjct: 946  LSVTFSPDGRLLASGSYDK----TIRVWDPATGALQQTLKGRIDSVRSVTFSPDGRLLA- 1000

Query: 275  SVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            S   DE + ++  D    + +R L       +S ++SPD   +   S     + + V   
Sbjct: 1001 SGSSDETIRVW--DPAIGSLQRTLKGHTKSVLSVTFSPDGRLLASGSS---DKTIRVWDP 1055

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                 ++  + +  S     +SP G L+A    SG  +         +  +  ++     
Sbjct: 1056 ATGALQQTLKGRIDSVRSVTFSPDGRLLA----SGSTY---------TALQRTLKGHTSW 1102

Query: 394  APT--WSPSGRSLI 405
             P+  +SP GR L 
Sbjct: 1103 IPSLAFSPDGRLLA 1116



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 72/220 (32%), Gaps = 15/220 (6%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           + +   + I R   +        + +    S + +  FS +G+    S   D+ + ++  
Sbjct: 619 FQSELPDWITRFPQVHENWSAELQTLEGHTSSVQSVAFSPDGRLLA-SGSHDKTVRLW-- 675

Query: 288 DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D  + A ++ L        S ++SPD   +   S     + + V        ++  +   
Sbjct: 676 DPATGALQQTLKGHTSSVQSVAFSPDGRLLTSGSS---DKTVRVWDPATGSSQQTLEGHT 732

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSL 404
                  +SP G L+A          I V        +  ++       + T+SP GR L
Sbjct: 733 NWVLSVAFSPDGRLLASASDDKT---IRVWDPVTGALQQTLKGHTNSVLSVTFSPDGRLL 789

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                   D   +++        +TL    ++     +  
Sbjct: 790 ---TSGSSDKTIRVWDPATGALQQTLNGHTSWIQSAAFSP 826



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 70/218 (32%), Gaps = 22/218 (10%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDR---KQIIGK----KFFSSPASWRKIAHTISDD 161
             V      RL          R+WD       + + G+    +  +     R +A   +  
Sbjct: 1031 SVTFSPDGRLLASGSSDKTIRVWDPATGALQQTLKGRIDSVRSVTFSPDGRLLASGSTYT 1090

Query: 162  IYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
              Q        +   + F  +     SG    ++ V D     ++         +    F
Sbjct: 1091 ALQRTLKGHTSWIPSLAFSPDGRLLASGSSDKTIRVWDPATGALQQTLEGHIDSVRSVTF 1150

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+ + +A  + D      V + D       + +      + +  FS +G+    S   D
Sbjct: 1151 SPDGRLLASGSSDK----TVRVWDPATGALQQTLKGHIDSVRSVTFSPDGRLLA-SGSYD 1205

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            E + ++  D  +   + + +T        +S DSS + 
Sbjct: 1206 ETIRVW--DPATGVLKEILSTDGAVTLVEFSQDSSYLA 1241


>gi|254282765|ref|ZP_04957733.1| peptidase S9, prolyl oligopeptidase active site region [gamma
           proteobacterium NOR51-B]
 gi|219678968|gb|EED35317.1| peptidase S9, prolyl oligopeptidase active site region [gamma
           proteobacterium NOR51-B]
          Length = 660

 Score =  102 bits (255), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 108/299 (36%), Gaps = 64/299 (21%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT----YDDEDILRV 239
             +      + ++ R G ++  LT   D     PR+SP+ + + +       DDE   +V
Sbjct: 46  GEADESSTQIFMVSRAGDDVVQLTAD-DYSASSPRWSPDGRYLGFLAARGAEDDEPKTQV 104

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----------------KDEAMD 283
           + +D R     +        +   R++ +GK  L+ ++                +DE   
Sbjct: 105 WTLD-RRGGEAQAYTAVDQGVSDFRWAPDGKGMLLVIRDKTAADLERETAHEEGRDERPL 163

Query: 284 IYSVD---------------------LQSNATE--RLTNTLFINISASYSPDSSQIVFES 320
            + +D                     ++       +LT   F +   ++ PD  +I F S
Sbjct: 164 PHVIDRLEFKQDGVPYLDRSRTHIYAVRGRGETPLQLTFGDFDDSQPAWRPDGREIAFVS 223

Query: 321 DREGKE------QLYVM----QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +R  +        ++++     ++    +R++ +   S + P WS  G  IA+   +   
Sbjct: 224 NRADEPDATQNTDIWIVSAVGDASSRKARRVTSN-IGSDYAPAWSRDGKQIAYVTVTEPD 282

Query: 371 F------AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   + ++   G   R+L    D N+  P ++P GR + F  +   +     Y +
Sbjct: 283 LIWYATNHLAIVPAAGGTARVLTAALDRNVIKPAFTPDGRGITFVLEDSAEQHLARYDL 341



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 83/277 (29%), Gaps = 54/277 (19%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +DD   S      D        +        K  +  +DR G   +    + DQ + + R
Sbjct: 70  ADDYSASSPRWSPDGRYLGFLAARGAEDDEPKTQVWTLDRRGGEAQ-AYTAVDQGVSDFR 128

Query: 219 FSPNQQKVAYATYD-----------------------------DEDILRVYLMDTRI--- 246
           ++P+ + +     D                              +     YL  +R    
Sbjct: 129 WAPDGKGMLLVIRDKTAADLERETAHEEGRDERPLPHVIDRLEFKQDGVPYLDRSRTHIY 188

Query: 247 -----DRAPKRIGNFRSMILAPRFSSNGKRALISVQK------DEAMDIYSV----DLQS 291
                   P ++         P +  +G+       +       +  DI+ V    D  S
Sbjct: 189 AVRGRGETPLQLTFGDFDDSQPAWRPDGREIAFVSNRADEPDATQNTDIWIVSAVGDASS 248

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQDK 345
               R+T+ +  + + ++S D  QI + +  E          L ++ + G   + ++   
Sbjct: 249 RKARRVTSNIGSDYAPAWSRDGKQIAYVTVTEPDLIWYATNHLAIVPAAGGTARVLTAAL 308

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           + +   P ++P G  I F      +  +     +   
Sbjct: 309 DRNVIKPAFTPDGRGITFVLEDSAEQHLARYDLETGS 345



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 82/254 (32%), Gaps = 67/254 (26%)

Query: 259 MILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            + AP  S +      +V+       + +  I+ V    +   +LT   +   S  +SPD
Sbjct: 24  SVAAPAISPDAGWVAYTVEAVDGEADESSTQIFMVSRAGDDVVQLTADDYSASSPRWSPD 83

Query: 313 SSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--- 364
              + F + R       K Q++ +   G + +  +   +    D  W+P G  +      
Sbjct: 84  GRYLGFLAARGAEDDEPKTQVWTLDRRGGEAQAYTAVDQG-VSDFRWAPDGKGMLLVIRD 142

Query: 365 ------------------------------KFSGEKF------AIGVMKKDG-SQERLLV 387
                                         K  G  +       I  ++  G +  +L  
Sbjct: 143 KTAADLERETAHEEGRDERPLPHVIDRLEFKQDGVPYLDRSRTHIYAVRGRGETPLQLTF 202

Query: 388 EDSNLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSI----DLNGRNETLINT------ 433
            D +   P W P GR + F   +    D    + ++ +    D + R    + +      
Sbjct: 203 GDFDDSQPAWRPDGREIAFVSNRADEPDATQNTDIWIVSAVGDASSRKARRVTSNIGSDY 262

Query: 434 -PAYASDPQWVGFM 446
            PA++ D + + ++
Sbjct: 263 APAWSRDGKQIAYV 276



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 45/130 (34%), Gaps = 10/130 (7%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           I FVS             + ++   G   +       S     + P +S + +++AY T 
Sbjct: 219 IAFVSNRADEPDATQNTDIWIVSAVGDASSRKARRVTSNIGSDYAPAWSRDGKQIAYVTV 278

Query: 232 DDEDILRVYLMDTRI-----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            + D++        I       A          ++ P F+ +G+     ++      +  
Sbjct: 279 TEPDLIWYATNHLAIVPAAGGTARVLTAALDRNVIKPAFTPDGRGITFVLEDSAEQHLAR 338

Query: 287 VDLQSNATER 296
            DL++ + +R
Sbjct: 339 YDLETGSIDR 348


>gi|332662875|ref|YP_004445663.1| WD40-like beta Propeller containing protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332331689|gb|AEE48790.1| WD40-like beta Propeller containing protein [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 1088

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 66/189 (34%), Gaps = 20/189 (10%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +            D++  D       R+T+T  +     +SPD   I F SDR G   +Y
Sbjct: 44  QHIAFVY----GGDLWITDRTGGEARRITSTPAVESDPHFSPDGRWIAFTSDRTGSNSVY 99

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEKFAIGVMKKDGSQERL 385
           V+  +G    R++    A+ F   W+  G  + +             +  +   G    L
Sbjct: 100 VVSIDGGTPTRLTWHPSAA-FARGWTNDGKRVLYASSRETAPSNYNRLWTVSTQGGPSTL 158

Query: 386 LVEDSNLQAPTWSPS---------GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           L          ++P           R  +  R+  G   + L  ++L+  +ET I     
Sbjct: 159 LPAPWGFDG-AFAPDKNRMVVDRMSRWDVEWREYRGGQNTALSILNLDDLSETPIPCERS 217

Query: 437 -ASDPQWVG 444
             + P W+G
Sbjct: 218 TDTQPLWIG 226



 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 78/201 (38%), Gaps = 17/201 (8%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASY 309
            R  N    +     S  GKR  +  +     +I++V + +  T  LT +  + +    +
Sbjct: 306 TRWENVNKRVSNAALSPTGKRVAMEARG----EIFTVPVANGDTRNLTRSAGVADRVPIW 361

Query: 310 SPDSSQIVFESDREG-KEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SPD +++ + SD  G    L +   +G    R IS  +    ++P WSP G  IAF    
Sbjct: 362 SPDGNRVAWFSDASGEGYALLIAAQDGLSAPRSISIGESKMAWEPTWSPDGKRIAFV--- 418

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKDGD-TGSKLYSI 421
            +   I V++ +  +                  +WSP  + L +++    +     L+S+
Sbjct: 419 DDDVRIRVLEVESGKISTADVGGLNIERGGLGLSWSPDSKWLAYAKTASNNFRRIMLWSV 478

Query: 422 DLNGRNETLINTPAYASDPQW 442
              G    L +  A    P W
Sbjct: 479 -ATGEARALTDPLADGFAPAW 498



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 82/217 (37%), Gaps = 29/217 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S ++Q +A+    D        +  R     +RI +  ++   P FS +G+    +  + 
Sbjct: 40  SLSEQHIAFVYGGD------LWITDRTGGEARRITSTPAVESDPHFSPDGRWIAFTSDRT 93

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----QLYVMQSNG 335
            +  +Y V +      RLT       +  ++ D  ++++ S RE       +L+ + + G
Sbjct: 94  GSNSVYVVSIDGGTPTRLTWHPSAAFARGWTNDGKRVLYASSRETAPSNYNRLWTVSTQG 153

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----------GEKFAIGVMKKDG-SQE 383
                +        FD  ++P  + +   + S           G+  A+ ++  D  S+ 
Sbjct: 154 GPSTLL---PAPWGFDGAFAPDKNRMVVDRMSRWDVEWREYRGGQNTALSILNLDDLSET 210

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +  E S    P W   G ++ F   +  D    +++
Sbjct: 211 PIPCERSTDTQPLWI--GNTIYFLSDR--DWTVNIWA 243



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 80/244 (32%), Gaps = 28/244 (11%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           ++ +     SP  ++VA       +I  V + +       +  G    +   P +S +G 
Sbjct: 312 NKRVSNAALSPTGKRVA--MEARGEIFTVPVANGDTRNLTRSAGVADRV---PIWSPDGN 366

Query: 271 RALISVQKDEAMDIYSVDLQSN--ATERLTNTLF-INISASYSPDSSQIVFESDREGKEQ 327
           R               +  Q    A   ++     +    ++SPD  +I F  D     +
Sbjct: 367 RVAWFSDASGEGYALLIAAQDGLSAPRSISIGESKMAWEPTWSPDGKRIAFVDD---DVR 423

Query: 328 LYVMQSNGSDQKRISQDK---EASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQE 383
           + V++                E       WSP    +A+ K +   F  I +      + 
Sbjct: 424 IRVLEVESGKISTADVGGLNIERGGLGLSWSPDSKWLAYAKTASNNFRRIMLWSVATGEA 483

Query: 384 RLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           R L +  ++  AP W   GR L F    +   GS               NT +  SDP +
Sbjct: 484 RALTDPLADGFAPAWDRGGRYLYFLASTEVALGSGWA------------NTSSTRSDPAY 531

Query: 443 VGFM 446
             ++
Sbjct: 532 GAYV 535



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 97/266 (36%), Gaps = 30/266 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L + DR G   R +T S   +  +P FSP+ + +A+ +        VY++       P 
Sbjct: 53  DLWITDRTGGEARRIT-STPAVESDPHFSPDGRWIAFTSDRTGSN-SVYVVSID-GGTPT 109

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMD----IYSVDLQSNATERLTNTLFINISA 307
           R+    S   A  ++++GKR L +  ++ A      +++V  Q   +  L      +   
Sbjct: 110 RLTWHPSAAFARGWTNDGKRVLYASSRETAPSNYNRLWTVSTQGGPSTLLPAPWGFD--G 167

Query: 308 SYSPDSSQIV----------FESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +++PD +++V          +   R G    L ++  +   +  I   + ++   P+W  
Sbjct: 168 AFAPDKNRMVVDRMSRWDVEWREYRGGQNTALSILNLDDLSETPI-PCERSTDTQPLW-- 224

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G+ I F         I              +         S +  +LIF R        
Sbjct: 225 IGNTIYFLSDRDWTVNIWAFTPATGALVQRTKFKESNVKWLSGNKGTLIFERD------G 278

Query: 417 KLYSIDLNGRNETLINTPAYASDPQW 442
            L++ID    N   ++       P W
Sbjct: 279 YLHTIDAASGNAKQLDITVRGDFP-W 303



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 73/194 (37%), Gaps = 14/194 (7%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           L  +   V+   +  +  +     + R LT S       P +SP+  +VA+ +    +  
Sbjct: 320 LSPTGKRVAMEARGEIFTVPVANGDTRNLTRSAGVADRVPIWSPDGNRVAWFSDASGEGY 379

Query: 238 RVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            + +       AP+ I    S M   P +S +GKR       D+ + I  ++++S     
Sbjct: 380 ALLIAAQDGLSAPRSISIGESKMAWEPTWSPDGKRIAFV---DDDVRIRVLEVESGKIS- 435

Query: 297 LTNTLF---INISA---SYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASY 349
            T  +    I       S+SPDS  + +         ++ +      + + ++ D  A  
Sbjct: 436 -TADVGGLNIERGGLGLSWSPDSKWLAYAKTASNNFRRIMLWSVATGEARALT-DPLADG 493

Query: 350 FDPVWSPQGDLIAF 363
           F P W   G  + F
Sbjct: 494 FAPAWDRGGRYLYF 507



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 86/202 (42%), Gaps = 31/202 (15%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERL------------TNTLFIN---ISASYSPDS 313
           G +  +  ++D    ++++D  S   ++L            T    +N    +A+ SP  
Sbjct: 267 GNKGTLIFERDGY--LHTIDAASGNAKQLDITVRGDFPWAETRWENVNKRVSNAALSPTG 324

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSGEKFA 372
            ++      E + +++ +     D + +++    +   P+WSP G+ +A F+  SGE +A
Sbjct: 325 KRVA----MEARGEIFTVPVANGDTRNLTRSAGVADRVPIWSPDGNRVAWFSDASGEGYA 380

Query: 373 IGVMKKDG-SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDT-----GSKLYSIDLN 424
           + +  +DG S  R +   E      PTWSP G+ + F               K+ + D+ 
Sbjct: 381 LLIAAQDGLSAPRSISIGESKMAWEPTWSPDGKRIAFVDDDVRIRVLEVESGKISTADVG 440

Query: 425 GRNETLINTP-AYASDPQWVGF 445
           G N        +++ D +W+ +
Sbjct: 441 GLNIERGGLGLSWSPDSKWLAY 462


>gi|281410839|gb|ADA68830.1| NDWp3 [Podospora anserina]
          Length = 252

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 87/230 (37%), Gaps = 12/230 (5%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +VS     ++ + +                +    FSP+  ++  A+ D      + + 
Sbjct: 19  RIVSASNDRTIRIWEAKSGKEVRKLEGHSGWVRSVAFSPDGSRIVSASDDG----TIRIW 74

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +  +  +++     ++L+  FS +G R + S   D  + I+          +L     
Sbjct: 75  EAKSGKEVRKLEGHSGLVLSVAFSPDGSRIV-SASNDGTIRIWEA-KSGKEVRKLEGHSG 132

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           + +S ++SPD S+IV  S+    + + + ++    + R  +    S     +SP G  I 
Sbjct: 133 LVLSVAFSPDGSRIVSASN---DQTIRIWEAKSGKEVRKLEGHSGSVRSVAFSPDGSRIV 189

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKD 411
            +        I   K  G + R L   SN  ++  +SP    ++ +    
Sbjct: 190 -SASDDGTIRIWEAK-SGKEVRKLEGHSNWVRSVAFSPDSSRIVSASDDG 237



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 86/239 (35%), Gaps = 15/239 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+  ++  A+ D      + + + +  +  +++      + +  FS
Sbjct: 1   FEGHSGSVRSVAFSPDGSRIVSASNDR----TIRIWEAKSGKEVRKLEGHSGWVRSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G R + S   D  + I+          +L     + +S ++SPD S+IV  S+     
Sbjct: 57  PDGSRIV-SASDDGTIRIWEA-KSGKEVRKLEGHSGLVLSVAFSPDGSRIVSASN---DG 111

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + + ++    + R  +          +SP G  I  +  + +   I   K  G + R L
Sbjct: 112 TIRIWEAKSGKEVRKLEGHSGLVLSVAFSPDGSRIV-SASNDQTIRIWEAK-SGKEVRKL 169

Query: 387 -VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                ++++  +SP G  ++ +     D   +++          L     +     +  
Sbjct: 170 EGHSGSVRSVAFSPDGSRIVSASD---DGTIRIWEAKSGKEVRKLEGHSNWVRSVAFSP 225


>gi|219848282|ref|YP_002462715.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Chloroflexus aggregans DSM 9485]
 gi|219542541|gb|ACL24279.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Chloroflexus aggregans DSM 9485]
          Length = 677

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 91/266 (34%), Gaps = 31/266 (11%)

Query: 212 QILFEPRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             L +PR SP+ Q  A          +  R  ++    +    R          PR+S +
Sbjct: 18  GWLEDPRLSPDGQTAAVVWVTVDRVNNGYRRQIVLVPTNGGSLRRFTRGKHDRQPRWSPD 77

Query: 269 GKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----DRE 323
           G+       +D+    IY + +      +LT         ++SPD   I F S    D +
Sbjct: 78  GRWLAFVSHRDDERGQIYLIPVDGGEARQLTAMPNGASDPAWSPDGRWIAFLSPVSVDEQ 137

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAIGVM 376
            +E    M S  +D     + +E    D        ++         + F      + V+
Sbjct: 138 AREDAGEMPSPPADAWEARRAREQRQHDEELRIDPRVVTKLPYRSGTSYFDDRWRQVYVV 197

Query: 377 KKD----GSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGS-----KLYSIDLNGR 426
           + D     +  R L     +   P W P+G +L+ +  +D +  S      +  I L+G 
Sbjct: 198 EVDDEDRTATPRRLTSGEIHYSTPVWLPNGEALLSTATRDPEADSLFAYYDVVRIPLDGL 257

Query: 427 NETLIN------TPAYASDPQWVGFM 446
              L +       P  + D   + F+
Sbjct: 258 PHALTSPGFSYFDPQPSPDGSQIAFL 283



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 111/287 (38%), Gaps = 36/287 (12%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +++V+   V+   +  + ++  +G ++R  T  +     +PR+SP+ + +A+ ++ D++ 
Sbjct: 34  VVWVTVDRVNNGYRRQIVLVPTNGGSLRRFTRGKH--DRQPRWSPDGRWLAFVSHRDDER 91

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-------QKDEAMDIYSVDL 289
            ++YL+        +++    +    P +S +G+              +++A ++ S   
Sbjct: 92  GQIYLIPVD-GGEARQLTAMPNGASDPAWSPDGRWIAFLSPVSVDEQAREDAGEMPSPPA 150

Query: 290 QSNATERLTNTLFINISASYSPD-SSQIVFESDR----EGKEQLYVMQSNGSD----QKR 340
            +    R       +      P   +++ + S      +   Q+YV++ +  D     +R
Sbjct: 151 DAWEARRAREQRQHDEELRIDPRVVTKLPYRSGTSYFDDRWRQVYVVEVDDEDRTATPRR 210

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKDGSQERLLVEDSNLQ 393
           ++   E  Y  PVW P G+ +  T     +       + +  +  DG    L     +  
Sbjct: 211 LTS-GEIHYSTPVWLPNGEALLSTATRDPEADSLFAYYDVVRIPLDGLPHALTSPGFSYF 269

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            P  SP G  + F R  +           L G    +   PA   +P
Sbjct: 270 DPQPSPDGSQIAFLRLNEER---------LLGEGRRVAIIPAEGGEP 307



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 71/224 (31%), Gaps = 20/224 (8%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA------ 281
           Y       +  V + D      P+R+ +       P +  NG+  L +  +D        
Sbjct: 186 YFDDRWRQVYVVEVDDEDRTATPRRLTSGEIHYSTPVWLPNGEALLSTATRDPEADSLFA 245

Query: 282 -MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-----EQLYVMQSNG 335
             D+  + L       LT+  F       SPD SQI F    E +      ++ ++ + G
Sbjct: 246 YYDVVRIPLD-GLPHALTSPGFSYFDPQPSPDGSQIAFLRLNEERLLGEGRRVAIIPAEG 304

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-----QERLLVEDS 390
            +   ++   + +     W P G  I F+        +  +   G+        L+    
Sbjct: 305 GEPHDLTAHTDLNVEQFRWQPDGQGILFSAGWRGDAHVYQIGLPGTPTYRNGLTLVGGAR 364

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            +        G S++F      D    L+    +G    L    
Sbjct: 365 LVSEFDVGRDG-SIVFIAG-SADNPCDLFFRSADGHERRLTAIN 406



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 49/158 (31%), Gaps = 4/158 (2%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLCVMDRDGAN 202
           +         + H ++   +     +     S+I F+  +    + +   + ++  +G  
Sbjct: 247 YDVVRIPLDGLPHALTSPGFSYFDPQPSPDGSQIAFLRLNEERLLGEGRRVAIIPAEGGE 306

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
              LT   D  + + R+ P+ Q + ++     D     +           +       L 
Sbjct: 307 PHDLTAHTDLNVEQFRWQPDGQGILFSAGWRGDAHVYQIGLPGTPTYRNGLTLVGGARLV 366

Query: 263 PRFS--SNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
             F    +G    I+   D   D++          RLT
Sbjct: 367 SEFDVGRDGSIVFIAGSADNPCDLFFRSAD-GHERRLT 403



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 4/63 (6%)

Query: 386 LVEDSNLQAPTWSPSGRS--LIFSR--KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           L E   L+ P  SP G++  +++    + +     ++  +  NG +        +   P+
Sbjct: 14  LYELGWLEDPRLSPDGQTAAVVWVTVDRVNNGYRRQIVLVPTNGGSLRRFTRGKHDRQPR 73

Query: 442 WVG 444
           W  
Sbjct: 74  WSP 76


>gi|218437121|ref|YP_002375450.1| hypothetical protein PCC7424_0112 [Cyanothece sp. PCC 7424]
 gi|218169849|gb|ACK68582.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 1236

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 104/276 (37%), Gaps = 29/276 (10%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG   N++ + + +           ++ +    FSP+ + +A  +YD      + L
Sbjct: 618 KTLASGSGDNTIKLWNLETGEQIRTLKGHEETVTSVSFSPDGKTLASWSYDK----TIKL 673

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            +    +  + +      + +  FS +GK    S   D+ + ++  +L++    R LT  
Sbjct: 674 WNLETGQEIRTLTGHDYYVNSVSFSPDGK-IWASGSVDKTIKLW--NLETGQEIRTLTGH 730

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP---- 356
            +   S S+SPD   +   S       + V       + R  +  + S     +SP    
Sbjct: 731 DYYVNSVSFSPDGKTLASGSQ---DGTIKVWNLETGKEIRTLKGHDNSVNSVSFSPIPPS 787

Query: 357 ------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSR 408
                  G ++A     G    I +   +  QE   +   D ++++ + SP G++L    
Sbjct: 788 PVTKGGAGGILASGSNDGT---IKLWNLESGQEIRTLQGHDYSVRSVSISPDGKTLASWS 844

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               D   KL+++       TL    +Y +   +  
Sbjct: 845 W---DKTIKLWNLKTGKEIRTLTGYDSYVNSVSFSP 877



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 102/264 (38%), Gaps = 21/264 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ SG +  ++ + + +           DQ ++   FSPN + +A  + D      + L
Sbjct: 932  KTLASGSVDKTIKLWNLESGTEIRTLKGHDQTVWSVSFSPNGKTLASGSVDK----TIKL 987

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             +       + +    S I +  FS +GK    S   D+ + ++  +L++    R L   
Sbjct: 988  SNLESGAEIRTLKGHDSSITSVSFSPDGKTLA-SGSMDKTIKLW--NLETGKEIRTLKGH 1044

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S S SPD   +   SD    + + +       + R  +  + +     +SP G  
Sbjct: 1045 DDSVNSVSISPDGKTLASGSD---DKTIKLSNLESGTEIRTLKGHDDAVNSVSFSPNGKT 1101

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +A            +    G++ R +   D  + + ++SP G++L        D   KL+
Sbjct: 1102 LASGSRDNTVKLWNLQS--GAEIRTIRGHDDTVWSVSFSPDGKTLASGSW---DGTIKLW 1156

Query: 420  SIDLNGRNETLINTPAYASDPQWV 443
            +++   R E ++    + +   W 
Sbjct: 1157 NLE---RGEEILTLKGHDNS-VWS 1176



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 89/227 (39%), Gaps = 16/227 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ SG +  ++ + + +           D  +    FSP+ + +A  + D      + L
Sbjct: 974  KTLASGSVDKTIKLSNLESGAEIRTLKGHDSSITSVSFSPDGKTLASGSMDK----TIKL 1029

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             +    +  + +      + +   S +GK         +   I   +L+S    R L   
Sbjct: 1030 WNLETGKEIRTLKGHDDSVNSVSISPDGKTLA---SGSDDKTIKLSNLESGTEIRTLKGH 1086

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S S+SP+   +   S R+   +L+        + R  +  + + +   +SP G  
Sbjct: 1087 DDAVNSVSFSPNGKTLASGS-RDNTVKLW--NLQSGAEIRTIRGHDDTVWSVSFSPDGKT 1143

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
            +A   + G    I +   +  +E L +   D+++ + ++SP G++L 
Sbjct: 1144 LASGSWDGT---IKLWNLERGEEILTLKGHDNSVWSVSFSPDGKTLA 1187



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 80/212 (37%), Gaps = 17/212 (8%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N+L  +  +G+  R      D  +     SP+ + +A  + D+     + L +       
Sbjct: 586 NALQTVLVEGS-ERNRLEGHDSYVNSVSISPDGKTLASGSGDN----TIKLWNLETGEQI 640

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASY 309
           + +      + +  FS +GK    S   D+ + ++  +L++    R LT   +   S S+
Sbjct: 641 RTLKGHEETVTSVSFSPDGKTLA-SWSYDKTIKLW--NLETGQEIRTLTGHDYYVNSVSF 697

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD       S     + + +       + R     +       +SP G  +A     G 
Sbjct: 698 SPDGKIWASGSV---DKTIKLWNLETGQEIRTLTGHDYYVNSVSFSPDGKTLASGSQDGT 754

Query: 370 KFAIGVMKKDGSQERLLV--EDSNLQAPTWSP 399
              I V   +  +E   +   D+++ + ++SP
Sbjct: 755 ---IKVWNLETGKEIRTLKGHDNSVNSVSFSP 783



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 56/357 (15%), Positives = 111/357 (31%), Gaps = 56/357 (15%)

Query: 75   RSDVFNLISQDSF-----KQKITNPDSIPRFQDW---------NSLGAQVLVTGRVIKEG 120
             S  F+ I             + +  +    + W            G    V   V    
Sbjct: 777  NSVSFSPIPPSPVTKGGAGGILASGSNDGTIKLWNLESGQEIRTLQGHDYSVR-SVSISP 835

Query: 121  KDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD-- 172
              +           +LW++K  K+I     + S            + +  S         
Sbjct: 836  DGKTLASWSWDKTIKLWNLKTGKEIRTLTGYDS----------YVNSVSFSPIPPSPVTK 885

Query: 173  -FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
                RIL       SG    ++ + + +           DQ ++   FS + + +A  + 
Sbjct: 886  GGAGRIL------ASGSQDGTIKLWNLESGTEIRTLKGHDQTVWSVSFSLDGKTLASGSV 939

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D      + L +       + +      + +  FS NGK    S   D+ + +   +L+S
Sbjct: 940  DK----TIKLWNLESGTEIRTLKGHDQTVWSVSFSPNGKTLA-SGSVDKTIKLS--NLES 992

Query: 292  NATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             A  R L        S S+SPD   +   S     + + +       + R  +  + S  
Sbjct: 993  GAEIRTLKGHDSSITSVSFSPDGKTLASGSM---DKTIKLWNLETGKEIRTLKGHDDSVN 1049

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
                SP G  +A          I +   +   E   ++  +    + ++SP+G++L 
Sbjct: 1050 SVSISPDGKTLASGSDDKT---IKLSNLESGTEIRTLKGHDDAVNSVSFSPNGKTLA 1103



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 74/201 (36%), Gaps = 15/201 (7%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           + ++L              R+    S + +   S +GK    S   D  + ++  +L++ 
Sbjct: 581 NREVLNALQTVLVEGSERNRLEGHDSYVNSVSISPDGKTLA-SGSGDNTIKLW--NLETG 637

Query: 293 ATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              R L        S S+SPD   +   S     + + +       + R     +     
Sbjct: 638 EQIRTLKGHEETVTSVSFSPDGKTLASWSY---DKTIKLWNLETGQEIRTLTGHDYYVNS 694

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLV-EDSNLQAPTWSPSGRSLIFSRK 409
             +SP G + A          I +   +  QE R L   D  + + ++SP G++L  S  
Sbjct: 695 VSFSPDGKIWASGSVDKT---IKLWNLETGQEIRTLTGHDYYVNSVSFSPDGKTLA-SGS 750

Query: 410 KDGDTGSKLYSIDLNGRNETL 430
           +DG    K+++++      TL
Sbjct: 751 QDGT--IKVWNLETGKEIRTL 769



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 11/163 (6%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           + +V ++ +   RL        S S SPD   +   S   G   + +      +Q R  +
Sbjct: 588 LQTVLVEGSERNRLEGHDSYVNSVSISPDGKTLASGS---GDNTIKLWNLETGEQIRTLK 644

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLV-EDSNLQAPTWSPSG 401
             E +     +SP G  +A   +      I +   +  QE R L   D  + + ++SP G
Sbjct: 645 GHEETVTSVSFSPDGKTLASWSYDKT---IKLWNLETGQEIRTLTGHDYYVNSVSFSPDG 701

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +  I++     D   KL++++      TL     Y +   +  
Sbjct: 702 K--IWASG-SVDKTIKLWNLETGQEIRTLTGHDYYVNSVSFSP 741


>gi|320158147|ref|YP_004190525.1| protease-related protein [Vibrio vulnificus MO6-24/O]
 gi|319933459|gb|ADV88322.1| protease-related protein [Vibrio vulnificus MO6-24/O]
          Length = 1088

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 85/236 (36%), Gaps = 31/236 (13%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             T S+   L +   SP+ Q++A+         +++L+ ++   A   + +  S    P 
Sbjct: 32  TTTNSQPTWLRDIALSPDGQRIAFTYAG-----QIWLIASKGGEAI-PLTSADSYSENPI 85

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G+    +  +    D++ V       +RLT     ++  ++SPD  ++ F S R G
Sbjct: 86  WSPDGESIAFTTDRFGPGDVFLVSANGGDAKRLTYHFSKDVPYAFSPDGQEVYFRSSRIG 145

Query: 325 --------------KEQLYVMQSNGSDQKRISQDKEAS----------YFDPVWSPQGDL 360
                           Q+Y +  +G  +K +  +  +S           +  + SP    
Sbjct: 146 DIESSVNNGFAGSASAQIYSVDVSGGREKLLLANPISSLSINGQTGEYLYTDLPSPMEQE 205

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                 S     I       ++   L       +   W+  GRS+ +  ++ G   
Sbjct: 206 WRKRDVSDAARDIWRFDPKTAKHTKLTNYLGEDRNAVWAEDGRSIYYLSERSGSFN 261



 Score = 93.5 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 24/147 (16%)

Query: 304 NISASY------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           N   ++      SPD  +I F        Q++++ S G +   ++     S  +P+WSP 
Sbjct: 35  NSQPTWLRDIALSPDGQRIAFTY----AGQIWLIASKGGEAIPLTSADSYSE-NPIWSPD 89

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKK------ 410
           G+ IAFT        + ++  +G   + L    +   P  +SP G+ + F   +      
Sbjct: 90  GESIAFTTDRFGPGDVFLVSANGGDAKRLTYHFSKDVPYAFSPDGQEVYFRSSRIGDIES 149

Query: 411 ------DGDTGSKLYSIDLNGRNETLI 431
                  G   +++YS+D++G  E L+
Sbjct: 150 SVNNGFAGSASAQIYSVDVSGGREKLL 176



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 83/224 (37%), Gaps = 26/224 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP   +VA     D     VY++      A KR+           FS++G   L + +
Sbjct: 343 AVSPVAPEVAIVARGD-----VYVVSLLSG-ATKRVTKTPQAERYLSFSNDGLSLLYASE 396

Query: 278 KDEAMDIY--SVDLQSNA--------TERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           ++   D++   ++    +         E+L++         YSPD ++I +   RE    
Sbjct: 397 RNGNWDVFHSYINDTGRSFSTSFDVVEEQLSDEAVDQTQPLYSPDGTKIAY---RENSNS 453

Query: 328 LYVMQS-NGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           + V    N S    +   +  SY D      WSP    +     +     I ++K DGS+
Sbjct: 454 IKVYDIENDSYHVLLDSSQLYSYVDQDLSYEWSPDSQYLVTRNRASYNADIVLLKADGSE 513

Query: 383 --ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              ++         P +S  G+ + +S  ++       +++  +
Sbjct: 514 KPLQITNTGFIEGEPKFSHDGQMIYWSTDRNSLREIDKWAVQSD 557



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 79/199 (39%), Gaps = 29/199 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S       I  + D    +Y V L S AT+R+T T       S+S D   +++ S+R 
Sbjct: 343 AVSPVAPEVAIVARGD----VYVVSLLSGATKRVTKTPQAERYLSFSNDGLSLLYASERN 398

Query: 324 GKEQLYVMQSNGSD----------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           G   ++    N +           ++++S D+      P++SP G  IA+ + S     I
Sbjct: 399 GNWDVFHSYINDTGRSFSTSFDVVEEQLS-DEAVDQTQPLYSPDGTKIAYRENSNS---I 454

Query: 374 GVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGDTGSKLYSIDLNG- 425
            V   +     +L++ S L +         WSP  + L+   +      + +  +  +G 
Sbjct: 455 KVYDIENDSYHVLLDSSQLYSYVDQDLSYEWSPDSQYLV--TRNRASYNADIVLLKADGS 512

Query: 426 -RNETLINTPAYASDPQWV 443
            +   + NT     +P++ 
Sbjct: 513 EKPLQITNTGFIEGEPKFS 531



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 64/376 (17%), Positives = 123/376 (32%), Gaps = 101/376 (26%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S D Y        D  S I F ++    G     + ++  +G + + LT    + +    
Sbjct: 76  SADSYSENPIWSPDGES-IAFTTDRFGPG----DVFLVSANGGDAKRLTYHFSKDVPY-A 129

Query: 219 FSPNQQKVAYATYDDEDI-------------LRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           FSP+ Q+V + +    DI              ++Y +D    R    + N  S       
Sbjct: 130 FSPDGQEVYFRSSRIGDIESSVNNGFAGSASAQIYSVDVSGGREKLLLANPIS-----SL 184

Query: 266 SSNGKRALISVQK---------------DEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           S NG+                       D A DI+  D ++    +LTN L  + +A ++
Sbjct: 185 SINGQTGEYLYTDLPSPMEQEWRKRDVSDAARDIWRFDPKTAKHTKLTNYLGEDRNAVWA 244

Query: 311 PDSSQIVFESDREGKEQLY--VMQSNGSDQKRISQDKEASYFDPVWSPQGDL-------- 360
            D   I + S+R G   ++  V+    ++  +I+Q +         S QGDL        
Sbjct: 245 EDGRSIYYLSERSGSFNVWQRVLSEPSAEPVQITQHEFLPVRFLSISQQGDLAYGYDGDI 304

Query: 361 -------------------------------------IAFTKFSGE-----KFAIGVMKK 378
                                                IA +  + E     +  + V+  
Sbjct: 305 WFKGKDEADAKPLQVTIRQSFLSKGKRFVNLNHEATEIAVSPVAPEVAIVARGDVYVVSL 364

Query: 379 DGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR---------NE 428
                + + +    +   ++S  G SL+++ +++G+       I+  GR          E
Sbjct: 365 LSGATKRVTKTPQAERYLSFSNDGLSLLYASERNGNWDVFHSYINDTGRSFSTSFDVVEE 424

Query: 429 TLINTPAYASDPQWVG 444
            L +     + P +  
Sbjct: 425 QLSDEAVDQTQPLYSP 440



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 14/112 (12%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPS 400
           +  +     D   SP G  IAFT        I ++   G +   L   DS  + P WSP 
Sbjct: 34  TNSQPTWLRDIALSPDGQRIAFTYAG----QIWLIASKGGEAIPLTSADSYSENPIWSPD 89

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-------AYASDPQWVGF 445
           G S+ F+  + G     ++ +  NG +   +          A++ D Q V F
Sbjct: 90  GESIAFTTDRFGPG--DVFLVSANGGDAKRLTYHFSKDVPYAFSPDGQEVYF 139



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 47/115 (40%), Gaps = 2/115 (1%)

Query: 216 EPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +P +SP+  K+AY    +   +  +      +     ++ ++    L+  +S + +  + 
Sbjct: 435 QPLYSPDGTKIAYRENSNSIKVYDIENDSYHVLLDSSQLYSYVDQDLSYEWSPDSQYLVT 494

Query: 275 SVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
             +     DI  +    +    ++TNT FI     +S D   I + +DR    ++
Sbjct: 495 RNRASYNADIVLLKADGSEKPLQITNTGFIEGEPKFSHDGQMIYWSTDRNSLREI 549


>gi|242825103|ref|XP_002488371.1| WD-repeat protein, putative [Talaromyces stipitatus ATCC 10500]
 gi|218712189|gb|EED11615.1| WD-repeat protein, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1180

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 58/320 (18%), Positives = 102/320 (31%), Gaps = 44/320 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G ++    D   V  RLWD         K         R IA   S D            
Sbjct: 721 GTMLASASDDCTV--RLWDTATGN--ARKTLEGHTDEARAIA--FSPD------------ 762

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     + S    +++ + D    N R         +    FSP+   +A A+YD 
Sbjct: 763 -------GTMLASASEDHTVRLWDTATGNARKTLKGHTDWVRAIAFSPDGTMLASASYD- 814

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                V L DT    A + +      + A  FS +G     S   D  + ++  D  +  
Sbjct: 815 ---CTVRLWDTATGNARQTLKGHTDWVRAIAFSPDGTMLA-SASGDRTVRLW--DTATGN 868

Query: 294 TERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             +        + A ++SPD + +   SD      + +  +   + ++  +         
Sbjct: 869 ARKTLEGHTDEVRAIAFSPDGTVLASASD---DCTVRLWDTATGNARQTLKGHTDRVKVI 925

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKK 410
            +SP G ++A   +      I +        R  +E    +  A  +SP G  L  +   
Sbjct: 926 AFSPDGIMLASASYDCT---IRLWDTATENTRQTLEGHTDRVKAMAFSPDGTVLASASD- 981

Query: 411 DGDTGSKLYSIDLNGRNETL 430
             D   +L+        +TL
Sbjct: 982 --DCTVRLWDTATGNARKTL 999



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 82/248 (33%), Gaps = 19/248 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D    N R         +    FSP+   +A A+ D      V L DT 
Sbjct: 684 SASGDRTVRLWDTATGNARKTLEGHTDWVRAIAFSPDGTMLASASDD----CTVRLWDTA 739

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
              A K +        A  FS +G     S  +D  + ++  D  +    + L       
Sbjct: 740 TGNARKTLEGHTDEARAIAFSPDGTMLA-SASEDHTVRLW--DTATGNARKTLKGHTDWV 796

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + ++SPD + +   S       + +  +   + ++  +          +SP G ++A  
Sbjct: 797 RAIAFSPDGTMLASASY---DCTVRLWDTATGNARQTLKGHTDWVRAIAFSPDGTMLASA 853

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                   + +        R  +E    +  A  +SP G  L  +     D   +L+   
Sbjct: 854 S---GDRTVRLWDTATGNARKTLEGHTDEVRAIAFSPDGTVLASASD---DCTVRLWDTA 907

Query: 423 LNGRNETL 430
                +TL
Sbjct: 908 TGNARQTL 915



 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 81/248 (32%), Gaps = 19/248 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D    + R         +    FS +   +A A+ D      V L DT 
Sbjct: 642 SASFDCTVQLWDTATGSARQTLEGHTDRVTAIAFSLDGTMLASASGDR----TVRLWDTA 697

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              A K +      + A  FS +G     S   D  + ++  D  +    +         
Sbjct: 698 TGNARKTLEGHTDWVRAIAFSPDGTMLA-SASDDCTVRLW--DTATGNARKTLEGHTDEA 754

Query: 306 SA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            A ++SPD + +   S+      + +  +   + ++  +          +SP G ++A  
Sbjct: 755 RAIAFSPDGTMLASASE---DHTVRLWDTATGNARKTLKGHTDWVRAIAFSPDGTMLASA 811

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +      + +        R  ++       A  +SP G  L       GD   +L+   
Sbjct: 812 SYDCT---VRLWDTATGNARQTLKGHTDWVRAIAFSPDGTMLA---SASGDRTVRLWDTA 865

Query: 423 LNGRNETL 430
                +TL
Sbjct: 866 TGNARKTL 873



 Score = 90.8 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 80/243 (32%), Gaps = 19/243 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
               S    +    FSP+   +A A++D      V L DT    A + +      + A  
Sbjct: 619 QTLESHAGRVNAIAFSPDGTMLASASFD----CTVQLWDTATGSARQTLEGHTDRVTAIA 674

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G     S   D  + ++  D  +    + L        + ++SPD + +   SD  
Sbjct: 675 FSLDGTMLA-SASGDRTVRLW--DTATGNARKTLEGHTDWVRAIAFSPDGTMLASASD-- 729

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + +  +   + ++  +          +SP G ++A      E   + +        
Sbjct: 730 -DCTVRLWDTATGNARKTLEGHTDEARAIAFSPDGTMLASAS---EDHTVRLWDTATGNA 785

Query: 384 RLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R  ++       A  +SP G  L  +     D   +L+        +TL     +     
Sbjct: 786 RKTLKGHTDWVRAIAFSPDGTMLASASY---DCTVRLWDTATGNARQTLKGHTDWVRAIA 842

Query: 442 WVG 444
           +  
Sbjct: 843 FSP 845



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 97/317 (30%), Gaps = 43/317 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        RLWD         +         R IA   S D               
Sbjct: 806  TMLASASYDCTVRLWDTATGN--ARQTLKGHTDWVRAIA--FSPD--------------- 846

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                   + S     ++ + D    N R         +    FSP+   +A A+ D    
Sbjct: 847  ----GTMLASASGDRTVRLWDTATGNARKTLEGHTDEVRAIAFSPDGTVLASASDD---- 898

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              V L DT    A + +      +    FS +G     S   D  + ++  D  +  T +
Sbjct: 899  CTVRLWDTATGNARQTLKGHTDRVKVIAFSPDGIMLA-SASYDCTIRLW--DTATENTRQ 955

Query: 297  -LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             L        + ++SPD + +   SD      + +  +   + ++  +          +S
Sbjct: 956  TLEGHTDRVKAMAFSPDGTVLASASD---DCTVRLWDTATGNARKTLEGHTDELRAIAFS 1012

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGD 413
            P G ++A          + +        R  +    +++ A  +S  G  L  +     D
Sbjct: 1013 PDGTMLASAS---GDRTVRLWDTATGNARQTLKGHTNSVNAIAFSLDGTMLASASY---D 1066

Query: 414  TGSKLYSIDLNGRNETL 430
               +L++  + G  +TL
Sbjct: 1067 CTIRLWNT-VTGVYQTL 1082



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/231 (12%), Positives = 76/231 (32%), Gaps = 17/231 (7%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           F+P    +   +       + ++ + +       + + +    + A  FS +G     S 
Sbjct: 585 FTPESSHIRSHFQRRVFRWMKKLPVTEKNWSSLLQTLESHAGRVNAIAFSPDGTMLA-SA 643

Query: 277 QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             D  + ++  D  + +  + L        + ++S D + +   S   G   + +  +  
Sbjct: 644 SFDCTVQLW--DTATGSARQTLEGHTDRVTAIAFSLDGTMLASAS---GDRTVRLWDTAT 698

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-- 393
            + ++  +          +SP G ++A      +   + +        R  +E    +  
Sbjct: 699 GNARKTLEGHTDWVRAIAFSPDGTMLASAS---DDCTVRLWDTATGNARKTLEGHTDEAR 755

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           A  +SP G  L  + +   D   +L+        +TL     +     +  
Sbjct: 756 AIAFSPDGTMLASASE---DHTVRLWDTATGNARKTLKGHTDWVRAIAFSP 803



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 56/183 (30%), Gaps = 33/183 (18%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G V+    D   V  RLWD         K         R IA   S D            
Sbjct: 973  GTVLASASDDCTV--RLWDTATGN--ARKTLEGHTDELRAIA--FSPD------------ 1014

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                      + S     ++ + D    N R         +    FS +   +A A+YD 
Sbjct: 1015 -------GTMLASASGDRTVRLWDTATGNARQTLKGHTNSVNAIAFSLDGTMLASASYD- 1066

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + L +T         G+  S + A  FS +G   +        + I S D+ S++
Sbjct: 1067 ---CTIRLWNTVTGVYQTLEGHTHS-VTAIAFSPDGTVLI---TDKGRIHINSHDVTSHS 1119

Query: 294  TER 296
              +
Sbjct: 1120 QPQ 1122


>gi|325300410|ref|YP_004260327.1| peptidase S41 [Bacteroides salanitronis DSM 18170]
 gi|324319963|gb|ADY37854.1| peptidase S41 [Bacteroides salanitronis DSM 18170]
          Length = 1083

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 63/165 (38%), Gaps = 22/165 (13%)

Query: 258 SMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
               +P +      S +G       + D    IY+V  Q     +LT     +    +SP
Sbjct: 18  GAQESPLWMRHCAISPDGSTVAFCYKGD----IYTVSAQGGRATQLTTNAAYDTRPVWSP 73

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------ 365
           D +++ F S REG   +YV+  +G   KRI+     +     +S  G ++          
Sbjct: 74  DGTRLAFASSREGSLDVYVISKDGGTPKRITT-HSGNETPVAFSDDGHVLYEASLMPDAQ 132

Query: 366 ---FSGEKF-AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
              F   +F  +  +  +G +  +L     ++  +    G +L++
Sbjct: 133 DMTFPSSQFPQVYQVSTEGGRP-VLYSSVPMEDISVGSDGTTLLY 176



 Score =  101 bits (252), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 108/302 (35%), Gaps = 40/302 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ + G FN   ++      +G ++ +          +R+LT +R+ +L    +  +
Sbjct: 232 FYYLSEKDGTFN---VYRRNVDGTGEVQLTRYTKHP----VRFLTAARNGLLC---YGYD 281

Query: 223 QQKVAY--ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            +           +  +R+    T     P+   +  + I     S +GK     +  D 
Sbjct: 282 GEIYTLKEGAQPQKLAVRIVTDQTERTSEPQVKTSGATEI---AVSPDGKEIAFILHGD- 337

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              ++        T ++T+T        +SPD   +V+ S+R G  Q+Y       D+K 
Sbjct: 338 ---VFVTSSDYKTTRKITDTPEQERDLDFSPDGRSLVYSSERGGLWQVYQASLTVKDEKL 394

Query: 341 ISQ----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK------KDGSQER 384
            +           D  A+ F P +SP G  +AF +       + +         DG  E 
Sbjct: 395 FTYATGIKEERLTDNTATSFQPQYSPDGKKVAFLENRTTLRVLNLEDKSVCTVMDGKYEY 454

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDPQ 441
              +        WSP  R L+      G   +K   L S   NG    L  +    ++ +
Sbjct: 455 SYSDGDQWFE--WSPDSRWLLSGYIGTGGWNNKDVALASASGNGEIHNLTESGYTDTNAK 512

Query: 442 WV 443
           WV
Sbjct: 513 WV 514



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 79/242 (32%), Gaps = 40/242 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   VA+      DI  V    +       ++    +    P +S +G R   +  
Sbjct: 30  AISPDGSTVAFCY--KGDIYTV----SAQGGRATQLTTNAAYDTRPVWSPDGTRLAFASS 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI------------SASYSPDSSQIVFESDREGK 325
           ++ ++D+Y +       +R+T                    AS  PD+  + F S +   
Sbjct: 84  REGSLDVYVISKDGGTPKRITTHSGNETPVAFSDDGHVLYEASLMPDAQDMTFPSSQ--F 141

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAI 373
            Q+Y + + G      S               G  + +               S     I
Sbjct: 142 PQVYQVSTEGGRPVLYSSVPMEDISVGS---DGTTLLYHDKKGYEDPWRKHHTSSITRDI 198

Query: 374 GVMK-KDGSQE-RLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            + +  DG +    L +     + P  S  G+S  +  +KDG     +Y  +++G  E  
Sbjct: 199 WMSRMADGKRTYTKLTDFAGEDRTPVGSADGKSFYYLSEKDGTF--NVYRRNVDGTGEVQ 256

Query: 431 IN 432
           + 
Sbjct: 257 LT 258



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/397 (13%), Positives = 106/397 (26%), Gaps = 137/397 (34%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    S V+   K  +  +   G     LT         P +SP+  ++A+A+  +   L
Sbjct: 31  ISPDGSTVAFCYKGDIYTVSAQGGRATQLTT-NAAYDTRPVWSPDGTRLAFASSREGS-L 88

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFS------------------------------- 266
            VY++ ++    PKRI           FS                               
Sbjct: 89  DVYVI-SKDGGTPKRITTHSGNETPVAFSDDGHVLYEASLMPDAQDMTFPSSQFPQVYQV 147

Query: 267 ---------------------SNGKRALI--------------SVQKDEAMDIYSVDLQS 291
                                S+G   L               +      + +  +    
Sbjct: 148 STEGGRPVLYSSVPMEDISVGSDGTTLLYHDKKGYEDPWRKHHTSSITRDIWMSRMADGK 207

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               +LT+    + +   S D     + S+++G   +Y    +G+ + ++++  +     
Sbjct: 208 RTYTKLTDFAGEDRTPVGSADGKSFYYLSEKDGTFNVYRRNVDGTGEVQLTRYTKHPVRF 267

Query: 352 PVWSPQG----------------------------------------------------- 358
              +  G                                                     
Sbjct: 268 LTAARNGLLCYGYDGEIYTLKEGAQPQKLAVRIVTDQTERTSEPQVKTSGATEIAVSPDG 327

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDT--- 414
             IAF         + V   D    R + +    +    +SP GRSL++S ++ G     
Sbjct: 328 KEIAFILHGD----VFVTSSDYKTTRKITDTPEQERDLDFSPDGRSLVYSSERGGLWQVY 383

Query: 415 -------GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                    KL++     + E L +  A +  PQ+  
Sbjct: 384 QASLTVKDEKLFTYATGIKEERLTDNTATSFQPQYSP 420



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 57/154 (37%), Gaps = 16/154 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   F+P++SP+ +KVA+        +L +           K   ++        +
Sbjct: 406 LTDNTATSFQPQYSPDGKKVAFLENRTTLRVLNLEDKSVCTVMDGKYEYSYSDGDQWFEW 465

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS----NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + +  L         +   V L S         LT + + + +A +  D   +++ESD
Sbjct: 466 SPDSRWLLSGYIGTGGWNNKDVALASASGNGEIHNLTESGYTDTNAKWVLDGKAMIWESD 525

Query: 322 REGK---------EQLYVM--QSNGSDQKRISQD 344
           R G            +Y+M    +  ++ R+S++
Sbjct: 526 RAGYRSHGSWGAESDIYIMFFDLDAYERFRMSKE 559


>gi|262403192|ref|ZP_06079752.1| protease-related protein [Vibrio sp. RC586]
 gi|262350691|gb|EEY99824.1| protease-related protein [Vibrio sp. RC586]
          Length = 1084

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 81/256 (31%), Gaps = 37/256 (14%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                  R   L +   SP+ QK+A+             +          +         
Sbjct: 30  PETAAHVRPTWLRDIALSPDGQKIAFTYAGQ------IWLVPAQGGEAVALTESGVYSEN 83

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +S + +    S  +    D++ + +Q   + RLT     +I  ++S D   I F S R
Sbjct: 84  PVWSPDSQSIAFSSDRYGFGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQLIYFSSRR 143

Query: 323 EGKE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--- 366
            G +             QLY + S G  ++R+      +  D   SP    I +T     
Sbjct: 144 LGDDKANASVKQGSFMAQLYSVPSVGGREQRVL---PIAVSDVAVSPAQSEILYTNQPSD 200

Query: 367 ---------SGEKFAIG-VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
                    S     I       G   ++       + P WS  G S+ +  ++ G+   
Sbjct: 201 EQPWRKGAVSDATRDIWQWSPLTGKHTQITTFRGEDRNPVWSTDGTSMFYLSEQAGNF-- 258

Query: 417 KLYSIDLNGRNETLIN 432
            ++    +G     I 
Sbjct: 259 NVWQQRFDGSAPVQIT 274



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/361 (11%), Positives = 106/361 (29%), Gaps = 89/361 (24%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E   ++     ++ S       +   +  + G + R        I +   FS + Q + 
Sbjct: 81  SENPVWSPDSQSIAFSSDRYGFGDVFILSIQGGESRRLTYHGAKDIPY--AFSADGQLIY 138

Query: 228 YATYDDED------------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +++    D            + ++Y + +   R  + +      +     S      L +
Sbjct: 139 FSSRRLGDDKANASVKQGSFMAQLYSVPSVGGREQRVL---PIAVSDVAVSPAQSEILYT 195

Query: 276 VQK------------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            Q             D   DI+     +    ++T     + +  +S D + + + S++ 
Sbjct: 196 NQPSDEQPWRKGAVSDATRDIWQWSPLTGKHTQITTFRGEDRNPVWSTDGTSMFYLSEQA 255

Query: 324 GKEQLYVMQSNGSDQKRISQDKE---------------ASYFDPVW-------------- 354
           G   ++  + +GS   +I+  ++                 +   +W              
Sbjct: 256 GNFNVWQQRFDGSAPVQITYHQQLPVRFLSASLQGDLAYGFDGEIWRLKAGSEQPQKVDV 315

Query: 355 ------SPQGDLIAFTKFSGEKF---------------AIGVMKKDGSQERLLVEDSNLQ 393
                  P G           +                 + V+       + + +    +
Sbjct: 316 SIRRSTMPDGRHSVNFNLETTEMVVAPNAAEVAIVARGDVYVVSLLSGLTQRITDTPEAE 375

Query: 394 AP-TWSPSGRSLIFSRKKDGDT---------GSKLYSIDLNGRNETLINTPAYASDPQWV 443
              ++S  G  L+++ +++G           G K +S  L+   E L+ T +    P + 
Sbjct: 376 RDISFSSDGYRLVYASEREGSWNLYQSYVNDGGKSFSTSLDIVEEPLLITESDVIQPLYS 435

Query: 444 G 444
            
Sbjct: 436 P 436



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 67/368 (18%), Positives = 121/368 (32%), Gaps = 63/368 (17%)

Query: 132 DVK---DRKQIIGKKFFSSPASWRKIAHTISDDI------------YQSITGEKGDFNSR 176
           DV     + +I+     S    WRK A  +SD              +  IT  +G+  + 
Sbjct: 182 DVAVSPAQSEILYTNQPSDEQPWRKGA--VSDATRDIWQWSPLTGKHTQITTFRGEDRNP 239

Query: 177 ILFVSESV----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-------K 225
           +     +            ++     DG+    +T  +   +     S           +
Sbjct: 240 VWSTDGTSMFYLSEQAGNFNVWQQRFDGSAPVQITYHQQLPVRFLSASLQGDLAYGFDGE 299

Query: 226 VAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           +       E   +V +   R      +   NF         + N     I  + D    +
Sbjct: 300 IWRLKAGSEQPQKVDVSIRRSTMPDGRHSVNFNLETTEMVVAPNAAEVAIVARGD----V 355

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           Y V L S  T+R+T+T       S+S D  ++V+ S+REG   LY    N   +   +  
Sbjct: 356 YVVSLLSGLTQRITDTPEAERDISFSSDGYRLVYASEREGSWNLYQSYVNDGGKSFSTSL 415

Query: 345 ---------KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                     E+    P++SP    IA+ +       + V   +  Q   L+++  L + 
Sbjct: 416 DIVEEPLLITESDVIQPLYSPNHKRIAYRENRNT---LKVYDIEQDQTYTLLDEHALYSY 472

Query: 396 T-------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT--------PAYASDP 440
                   WSP    L+   +        +  +  +G    L  +        P +++D 
Sbjct: 473 VDADLSYQWSPDSEYLV--TRDRAMFNGDIQLLKFDGSEVPLNLSQSGFAEFMPQFSADG 530

Query: 441 QWVG-FMD 447
           QWV  F D
Sbjct: 531 QWVYWFTD 538



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 82/225 (36%), Gaps = 28/225 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN  +VA     D     VY++        +RI +         FSS+G R + + +++
Sbjct: 341 APNAAEVAIVARGD-----VYVVSLLSG-LTQRITDTPEAERDISFSSDGYRLVYASERE 394

Query: 280 EAMDIYSVDLQSNA----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            + ++Y   +               E L  T    I   YSP+  +I +   RE +  L 
Sbjct: 395 GSWNLYQSYVNDGGKSFSTSLDIVEEPLLITESDVIQPLYSPNHKRIAY---RENRNTLK 451

Query: 330 VMQSNGSDQKRISQDKE-----ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           V          +  +        +     WSP  + +     +     I ++K DGS+  
Sbjct: 452 VYDIEQDQTYTLLDEHALYSYVDADLSYQWSPDSEYLVTRDRAMFNGDIQLLKFDGSEVP 511

Query: 385 L-LVEDSNLQA-PTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNG 425
           L L +    +  P +S  G+ + +     G  D  + +   D+ G
Sbjct: 512 LNLSQSGFAEFMPQFSADGQWVYWFTDAKGLRDIDNMVVQYDVYG 556



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 46/121 (38%), Gaps = 14/121 (11%)

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-N 391
           +N +  +  +  +     D   SP G  IAFT        I ++   G +   L E    
Sbjct: 25  ANTNQPETAAHVRPTWLRDIALSPDGQKIAFTYAG----QIWLVPAQGGEAVALTESGVY 80

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-------YASDPQWVG 444
            + P WSP  +S+ FS  + G     ++ + + G     +           +++D Q + 
Sbjct: 81  SENPVWSPDSQSIAFSSDRYG--FGDVFILSIQGGESRRLTYHGAKDIPYAFSADGQLIY 138

Query: 445 F 445
           F
Sbjct: 139 F 139


>gi|322436331|ref|YP_004218543.1| peptidase S41 [Acidobacterium sp. MP5ACTX9]
 gi|321164058|gb|ADW69763.1| peptidase S41 [Acidobacterium sp. MP5ACTX9]
          Length = 1119

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 74/200 (37%), Gaps = 29/200 (14%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           R      R+     +  AP  S +G     S + D   D++++ +     +R+T    I+
Sbjct: 53  RKGGKATRLTAGVGIETAPVVSPDGSTIAFSGEYDGNTDVFTIPIAGGIPKRVTYHPSID 112

Query: 305 ISASYSPDSSQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +  +++PD  QI+F SDR+      QL+ +   G   K +        +    S  G +I
Sbjct: 113 VPVAWTPDGKQIIFRSDRQATSRFAQLFEVAPTGGVAKLL---PLPLAYQGQISADGKMI 169

Query: 362 AFT------------------KFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGR 402
           A++                     G    + +    D +   +  E ++  +P W   G 
Sbjct: 170 AYSPLAPAFGFNYTSYVSWGNYRGGRAGTVNITSLPDLTTTAIPHEKASDFSPVW--FGN 227

Query: 403 SLIFSRKKDGDTGSKLYSID 422
            + F   + G     L+S D
Sbjct: 228 KVYFLSDRKGSV--SLFSYD 245



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 9/141 (6%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            + +     + A D+++VD +     RLT  + I  +   SPD S I F  + +G   ++
Sbjct: 38  TQIVF----NYAGDLWTVDRKGGKATRLTAGVGIETAPVVSPDGSTIAFSGEYDGNTDVF 93

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKF-AIGVMKKDGSQERLL 386
            +   G   KR++    +      W+P G  I F   + +  +F  +  +   G   +LL
Sbjct: 94  TIPIAGGIPKRVTY-HPSIDVPVAWTPDGKQIIFRSDRQATSRFAQLFEVAPTGGVAKLL 152

Query: 387 VEDSNLQAPTWSPSGRSLIFS 407
                 Q    S  G+ + +S
Sbjct: 153 PLPLAYQG-QISADGKMIAYS 172



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/305 (16%), Positives = 110/305 (36%), Gaps = 29/305 (9%)

Query: 127 EFRLWDVKDRKQ-IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           E  L+D    K  +I           R+    +S +I  +     G    R +F      
Sbjct: 279 EIYLFDPASGKSHMIEIDVTGDLPEVRERIENVSAEIEHAGISPTGI---RAVF------ 329

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  +  +       R LT +   +   P ++P+ Q +AY + D+  +  +++    
Sbjct: 330 --EAHGEILTVPVKHGPTRDLTNTPGAMERWPAWAPDGQSIAYFS-DESGLYALHVASQN 386

Query: 246 IDRAPKR--IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--- 300
            D   K+  +    +    P++S + K+       D  ++++ +D+ +     +      
Sbjct: 387 DDGPVKKFPLAAEAAYYFQPKWSPDSKKIAF---YDNRLNLWMLDIVTGKLSHVGENNFF 443

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I+   ++SPDS  + +    +       + S  +    +  DK A   +P +   G  
Sbjct: 444 SGIDRDYAWSPDSRWLAYSRTEDNHLSCLYLYSTETGTSTVFTDKMADSGNPAFDRNGKY 503

Query: 361 IAF---TKFSGEKFAIGVMK---KDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDG 412
           + F   T   G  F + +     +       LV  ++  +P    S   ++L  +++ + 
Sbjct: 504 LYFTASTNQGGTAFGLDMTSDLLRTTRNLYALVLAADAPSPVAPESDDEKTLAEAKEHNK 563

Query: 413 DTGSK 417
           D G +
Sbjct: 564 DMGDE 568



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 90/267 (33%), Gaps = 47/267 (17%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P      F P +     KV + + D +  + ++  D       + + N  S + +     
Sbjct: 213 PHEKASDFSPVWF--GNKVYFLS-DRKGSVSLFSYDPATKAVTEALHNTGSDMHSLSAGP 269

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNA---------------TERLTNTLFINISASYSPD 312
            G      +  D+  +IY  D  S                  ER+ N       A  SP 
Sbjct: 270 GG------LVYDQLGEIYLFDPASGKSHMIEIDVTGDLPEVRERIENVSAEIEHAGISPT 323

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             + VFE+      ++  +       + ++    A    P W+P G  IA+       +A
Sbjct: 324 GIRAVFEA----HGEILTVPVKHGPTRDLTNTPGAMERWPAWAPDGQSIAYFSDESGLYA 379

Query: 373 IGV--MKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           + V     DG  ++  L  E +    P WSP  + + F   +       L+ +D+     
Sbjct: 380 LHVASQNDDGPVKKFPLAAEAAYYFQPKWSPDSKKIAFYDNR-----LNLWMLDIVTGKL 434

Query: 429 TLINTP----------AYASDPQWVGF 445
           + +             A++ D +W+ +
Sbjct: 435 SHVGENNFFSGIDRDYAWSPDSRWLAY 461



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 50/359 (13%), Positives = 99/359 (27%), Gaps = 87/359 (24%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNS----LCVMDRDGANIRYLTPSRDQILFEPRFS 220
            +T   G   + ++    S ++   +      +  +   G   + +T     I     ++
Sbjct: 60  RLTAGVGIETAPVVSPDGSTIAFSGEYDGNTDVFTIPIAGGIPKRVT-YHPSIDVPVAWT 118

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----- 275
           P+ +++ + +          L +        ++     +    + S++GK    S     
Sbjct: 119 PDGKQIIFRSDRQATSRFAQLFEVAPTGGVAKLLPLP-LAYQGQISADGKMIAYSPLAPA 177

Query: 276 -------------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
                         +   A  +    L    T  + +    + S  +    +++ F SDR
Sbjct: 178 FGFNYTSYVSWGNYRGGRAGTVNITSLPDLTTTAIPHEKASDFSPVWF--GNKVYFLSDR 235

Query: 323 EGKEQLYVMQSN-----------GSDQKRISQD---------KEASYFDPV--------- 353
           +G   L+                GSD   +S            E   FDP          
Sbjct: 236 KGSVSLFSYDPATKAVTEALHNTGSDMHSLSAGPGGLVYDQLGEIYLFDPASGKSHMIEI 295

Query: 354 ------------------------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                                    SP G    F         I  +       R L   
Sbjct: 296 DVTGDLPEVRERIENVSAEIEHAGISPTGIRAVFEAHG----EILTVPVKHGPTRDLTNT 351

Query: 390 SNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG--RNETLINTPAYASDPQWVG 444
                  P W+P G+S+ +   + G     + S + +G  +   L    AY   P+W  
Sbjct: 352 PGAMERWPAWAPDGQSIAYFSDESGLYALHVASQNDDGPVKKFPLAAEAAYYFQPKWSP 410



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 4/75 (5%)

Query: 372 AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NET 429
            +  + + G +   L     ++ AP  SP G ++ FS + DG+T   +++I + G   + 
Sbjct: 47  DLWTVDRKGGKATRLTAGVGIETAPVVSPDGSTIAFSGEYDGNT--DVFTIPIAGGIPKR 104

Query: 430 LINTPAYASDPQWVG 444
           +   P+      W  
Sbjct: 105 VTYHPSIDVPVAWTP 119


>gi|281410823|gb|ADA68824.1| HNWD3 [Podospora anserina]
 gi|281410825|gb|ADA68825.1| HNWD3 [Podospora anserina]
          Length = 420

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 78/227 (34%), Gaps = 16/227 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG +  ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 144 QRVASGSVDKTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDK----TIKI 199

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +   R  + +  FS +G+R   S   DE + I+  D  S    + L   
Sbjct: 200 WDAASGTCTQTLEGHRGTVRSVAFSPDGQRVA-SGSVDETIKIW--DAASGTCTQTLEGH 256

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S       + +  +      +  +      +   +SP G  
Sbjct: 257 RGSVRSVAFSPDGQRVASGSV---DNTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQR 313

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
           +A          I +           +E     + +  +SP G+ + 
Sbjct: 314 VASGSVDET---IKIWDAASGTCTQTLEGHRGTVWSVAFSPDGQRVA 357



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 79/227 (34%), Gaps = 16/227 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG +  ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 102 QRVASGSVDKTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDK----TIKI 157

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +   R  + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 158 WDAASGTCTQTLEGHRGPVWSVAFSPDGQRVA-SGSVDKTIKIW--DAASGTCTQTLEGH 214

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S     E + +  +      +  +    S     +SP G  
Sbjct: 215 RGTVRSVAFSPDGQRVASGSV---DETIKIWDAASGTCTQTLEGHRGSVRSVAFSPDGQR 271

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
           +A          I +           +E     + +  +SP G+ + 
Sbjct: 272 VASGSVDNT---IKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVA 315



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 82/227 (36%), Gaps = 16/227 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG   N++ + D                ++   FSP+ Q+VA  + D+     + +
Sbjct: 18  QRVASGSDDNTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSDDN----TIKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +   R  +L+  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 74  WDAASGTCTQTLEGHRGPVLSVAFSPDGQRVA-SGSVDKTIKIW--DAASGTCTQTLEGH 130

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S     + + +  +      +  +      +   +SP G  
Sbjct: 131 RGPVWSVAFSPDGQRVASGSV---DKTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
           +A          I +           +E     +++  +SP G+ + 
Sbjct: 188 VASGSVDKT---IKIWDAASGTCTQTLEGHRGTVRSVAFSPDGQRVA 231



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 80/227 (35%), Gaps = 16/227 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG +  ++ + D                +    FSP+ Q+VA  + D+     + +
Sbjct: 186 QRVASGSVDKTIKIWDAASGTCTQTLEGHRGTVRSVAFSPDGQRVASGSVDE----TIKI 241

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +   R  + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 242 WDAASGTCTQTLEGHRGSVRSVAFSPDGQRVA-SGSVDNTIKIW--DAASGTCTQTLEGH 298

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S     E + +  +      +  +    + +   +SP G  
Sbjct: 299 RGPVWSVAFSPDGQRVASGSV---DETIKIWDAASGTCTQTLEGHRGTVWSVAFSPDGQR 355

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
           +A          I +           +E    ++ +  +SP G+ + 
Sbjct: 356 VASGSVDKT---IKIWDAASGTCTQTLEGHRGSVLSVAFSPDGQRVA 399



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 70/202 (34%), Gaps = 16/202 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ Q+VA  + D+     + + D       + +   R  + +  FS
Sbjct: 1   LEGHRGPVRSVAFSPDGQRVASGSDDN----TIKIWDAASGTCTQTLEGHRGPVWSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
            +G+R   S   D  + I+  D  S    + L       +S ++SPD  ++   S     
Sbjct: 57  PDGQRVA-SGSDDNTIKIW--DAASGTCTQTLEGHRGPVLSVAFSPDGQRVASGSV---D 110

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + +  +      +  +      +   +SP G  +A          I +          
Sbjct: 111 KTIKIWDAASGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDKT---IKIWDAASGTCTQ 167

Query: 386 LVED--SNLQAPTWSPSGRSLI 405
            +E     + +  +SP G+ + 
Sbjct: 168 TLEGHRGPVWSVAFSPDGQRVA 189



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 69/206 (33%), Gaps = 14/206 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG +  ++ + D                +    FSP+ Q+VA  + D+     + +
Sbjct: 228 QRVASGSVDETIKIWDAASGTCTQTLEGHRGSVRSVAFSPDGQRVASGSVDN----TIKI 283

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +   R  + +  FS +G+R   S   DE + I+  D  S    + L   
Sbjct: 284 WDAASGTCTQTLEGHRGPVWSVAFSPDGQRVA-SGSVDETIKIW--DAASGTCTQTLEGH 340

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S     + + +  +      +  +    S     +SP G  
Sbjct: 341 RGTVWSVAFSPDGQRVASGSV---DKTIKIWDAASGTCTQTLEGHRGSVLSVAFSPDGQR 397

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL 386
           +A          I +           
Sbjct: 398 VASGSVDKT---IKIWDAASGTYTQT 420



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 26/199 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDR---KQIIG-----KKFFSSPASWRKIAHTISDDI------ 162
            +     +    ++WD       + + G     +    SP   R  + ++ + I      
Sbjct: 228 QRVASGSVDETIKIWDAASGTCTQTLEGHRGSVRSVAFSPDGQRVASGSVDNTIKIWDAA 287

Query: 163 ----YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                Q++ G +G   S       + V SG +  ++ + D                ++  
Sbjct: 288 SGTCTQTLEGHRGPVWSVAFSPDGQRVASGSVDETIKIWDAASGTCTQTLEGHRGTVWSV 347

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q+VA  + D      + + D       + +   R  +L+  FS +G+R   S  
Sbjct: 348 AFSPDGQRVASGSVDK----TIKIWDAASGTCTQTLEGHRGSVLSVAFSPDGQRVA-SGS 402

Query: 278 KDEAMDIYSVDLQSNATER 296
            D+ + I+  D  S    +
Sbjct: 403 VDKTIKIW--DAASGTYTQ 419


>gi|332663301|ref|YP_004446089.1| peptidase S9 prolyl oligopeptidase [Haliscomenobacter hydrossis DSM
           1100]
 gi|332332115|gb|AEE49216.1| peptidase S9 prolyl oligopeptidase [Haliscomenobacter hydrossis DSM
           1100]
          Length = 691

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 95/298 (31%), Gaps = 66/298 (22%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA---TYDDEDILRVYLMDTRIDRAPK 251
           V  ++GA+I +      + +  P  SP+ + + Y    T   ++     +   R      
Sbjct: 22  VFAQNGASISFEQVIALRSIGTPILSPDGKHLVYTVGSTDWKDNSYDTEIWLAREGEEAF 81

Query: 252 RIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++  + +    +P++S +GK    +  +++   I+ +       ++++N         +S
Sbjct: 82  QLTRSTKGSSTSPKWSPDGKWIAFTSSRNDKSQIFVIRPNGGEAQQISNEDEGVGGFEWS 141

Query: 311 PDSSQIVFE------------SDREGK----------EQLYV-------MQSNGS----- 336
           PD  Q                 +R G             L++       M S G      
Sbjct: 142 PDGKQFAITKQEPEDKEEKKRKERYGGWAADDAEYRLSHLWLLEFKPDMMPSPGELPCYD 201

Query: 337 ---------------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGV 375
                             R++     +     WSP G +I + +             I V
Sbjct: 202 EKKDSTVKSDCITYPKSTRLT-GGSFTVSGFDWSPDGKMIVYNRQPNPLINYSMYSDIEV 260

Query: 376 MKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-----GSKLYSIDLNGRN 427
           +     Q +  +   S      WSP  + L+++   D  T       KL+  DL G  
Sbjct: 261 IDVASKQIKYKVANPSVDNYAAWSPDSKKLLYTSSLDDTTSFYYKNDKLFVADLTGGK 318



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 85/247 (34%), Gaps = 62/247 (25%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDI-----YSVDLQSNATERLT-NTLFINISASYSPD 312
            I  P  S +GK  + +V   +  D        +  +     +LT +T   + S  +SPD
Sbjct: 40  SIGTPILSPDGKHLVYTVGSTDWKDNSYDTEIWLAREGEEAFQLTRSTKGSSTSPKWSPD 99

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------- 364
              I F S R  K Q++V++ NG + ++IS + E       WSP G   A T        
Sbjct: 100 GKWIAFTSSRNDKSQIFVIRPNGGEAQQISNEDEG-VGGFEWSPDGKQFAITKQEPEDKE 158

Query: 365 -----KFSGE----------------KFAIGVMKKDG---------------------SQ 382
                +  G                 +F   +M   G                       
Sbjct: 159 EKKRKERYGGWAADDAEYRLSHLWLLEFKPDMMPSPGELPCYDEKKDSTVKSDCITYPKS 218

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS----IDLNGRN-ETLINTPAYA 437
            RL      +    WSP G+ ++++R+ +      +YS    ID+  +  +  +  P+  
Sbjct: 219 TRLTGGSFTVSGFDWSPDGKMIVYNRQPNPLINYSMYSDIEVIDVASKQIKYKVANPSVD 278

Query: 438 SDPQWVG 444
           +   W  
Sbjct: 279 NYAAWSP 285



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 105/314 (33%), Gaps = 68/314 (21%)

Query: 161 DIYQSITGEKGDFNSRILFVSES----VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           + +Q     KG   S              S   K+ + V+  +G   + ++   + +   
Sbjct: 79  EAFQLTRSTKGSSTSPKWSPDGKWIAFTSSRNDKSQIFVIRPNGGEAQQISNEDEGVGGF 138

Query: 217 PRFSPNQQKVAYATYD---------------------DEDILRVYLMDTRIDRAP----- 250
             +SP+ ++ A    +                     +  +  ++L++ + D  P     
Sbjct: 139 -EWSPDGKQFAITKQEPEDKEEKKRKERYGGWAADDAEYRLSHLWLLEFKPDMMPSPGEL 197

Query: 251 ---------------------KRIGNFRSMILAPRFSSNGKRALISVQKDE------AMD 283
                                 R+      +    +S +GK  + + Q +         D
Sbjct: 198 PCYDEKKDSTVKSDCITYPKSTRLTGGSFTVSGFDWSPDGKMIVYNRQPNPLINYSMYSD 257

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-------GKEQLYVMQSNGS 336
           I  +D+ S   +       ++  A++SPDS ++++ S  +         ++L+V    G 
Sbjct: 258 IEVIDVASKQIKYKVANPSVDNYAAWSPDSKKLLYTSSLDDTTSFYYKNDKLFVADLTGG 317

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAP 395
               I+QD +      VW+  G  I F  F   K  +  +     Q + L    ++    
Sbjct: 318 KPISIAQDFDEDIGSIVWNDSG--IFFAAFQRTKRQLFRIDMSSGQIKALTNGKDILGGY 375

Query: 396 TWSPSGRSLIFSRK 409
           ++S  G+ L +S  
Sbjct: 376 SFSKDGKILAYSAS 389



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 50/141 (35%), Gaps = 9/141 (6%)

Query: 210 RDQILFEPRFSPNQQKVAYATY------DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
              +     +SP+ +K+ Y +             ++++ D    +      +F   I + 
Sbjct: 274 NPSVDNYAAWSPDSKKLLYTSSLDDTTSFYYKNDKLFVADLTGGKPISIAQDFDEDIGSI 333

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDR 322
            ++ +G     +  +     ++ +D+ S   + LTN   I    S+S D   + +  S  
Sbjct: 334 VWNDSG--IFFAAFQRTKRQLFRIDMSSGQIKALTNGKDILGGYSFSKDGKILAYSASTA 391

Query: 323 EGKEQLYVMQSNGSDQKRISQ 343
               +++          +++ 
Sbjct: 392 TTLSEIFKTPLLTFKPVQLTN 412


>gi|299139848|ref|ZP_07033020.1| peptidase S41 [Acidobacterium sp. MP5ACTX8]
 gi|298598202|gb|EFI54368.1| peptidase S41 [Acidobacterium sp. MP5ACTX8]
          Length = 1127

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 80/186 (43%), Gaps = 16/186 (8%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREG 324
           S  G RA+     D    I++V  +      LTN+      + ++SPD  +I + SD  G
Sbjct: 316 SPTGVRAVFEAHGD----IFTVPAEKGDVRNLTNSSGSAERAPAWSPDGKRIAYFSDATG 371

Query: 325 KEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           + +LY+   +G    ++         Y+ P WSP    I F+      + + V    G  
Sbjct: 372 EYKLYLRDQDGLSAPKVIDLGPDPTYYYSPTWSPDSKRIVFSDKRLNLWYVNVDPALGPA 431

Query: 383 ERLLVEDSNLQ-------APTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTP 434
           + + V+    +       + ++SP  + ++++R     +  + LYSI   G+   + +  
Sbjct: 432 KPIKVDTDLREGFGPAGFSASFSPDSQWILYARSLPSLEDAAFLYSI-ATGKTTQITDGM 490

Query: 435 AYASDP 440
           ++ ++P
Sbjct: 491 SHVTNP 496



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 66/190 (34%), Gaps = 21/190 (11%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +       D    I+ V     A  RLT+T  I     +SPD + I + +   G   +Y
Sbjct: 37  TQIAFRYADD----IWLVSRDGGAARRLTSTSNITDGPFFSPDGNTIAYSATAAGNTDIY 92

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLL 386
            + + G   KRI+     +Y    W+P G  +            F +  +  DGS     
Sbjct: 93  TIPATGGAPKRITYRPGGNYVTG-WTPDGHDLLMQSMQNAVRVYFQLYRVHADGSGLPER 151

Query: 387 VEDSNLQAPTWSPSGRSLIF-----------SRKKDGDTGSKLYSIDLNG-RNETLINTP 434
           +   +    T SP G  L +            R + G T   ++ +DL       +    
Sbjct: 152 LPLPSAWYGTLSPDGSHLAYNPWLQWQEESWKRYRGGQTQP-VWIVDLKTLDRIKIPREN 210

Query: 435 AYASDPQWVG 444
           +    P W+G
Sbjct: 211 SNDRYPLWLG 220



 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 95/243 (39%), Gaps = 30/243 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +      +L  P  S  + ++A+   DD        + +R   A +R+ +  ++   P 
Sbjct: 20  QVHAQAPHLLRAPSIS--ETQIAFRYADD------IWLVSRDGGAARRLTSTSNITDGPF 71

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G     S       DIY++     A +R+T     N    ++PD   ++ +S +  
Sbjct: 72  FSPDGNTIAYSATAAGNTDIYTIPATGGAPKRITYRPGGNYVTGWTPDGHDLLMQSMQNA 131

Query: 325 ---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEK 370
                QLY + ++GS          A Y     SP G  +A+            ++ G +
Sbjct: 132 VRVYFQLYRVHADGSGLPERLPLPSAWYG--TLSPDGSHLAYNPWLQWQEESWKRYRGGQ 189

Query: 371 FA-IGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              + ++      + ++  E+SN + P W   G S+ F   ++G T   L+  D+  +  
Sbjct: 190 TQPVWIVDLKTLDRIKIPRENSNDRYPLWL--GDSVYFLSDRNGPT--SLFRYDVKSKEV 245

Query: 429 TLI 431
             +
Sbjct: 246 KQL 248



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 75/220 (34%), Gaps = 17/220 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           + +L       +     SP   +  +  + D     ++ +            +  S   A
Sbjct: 299 VPHLAKISSGEIQNADISPTGVRAVFEAHGD-----IFTVPAEKGDVRNLTNSSGSAERA 353

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFE 319
           P +S +GKR            +Y  D    +  ++ +         S ++SPDS +IVF 
Sbjct: 354 PAWSPDGKRIAYFSDATGEYKLYLRDQDGLSAPKVIDLGPDPTYYYSPTWSPDSKRIVF- 412

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKE------ASYFDPVWSPQGDLIAFTKFSGE-KFA 372
           SD+        +       K I  D +       + F   +SP    I + +     + A
Sbjct: 413 SDKRLNLWYVNVDPALGPAKPIKVDTDLREGFGPAGFSASFSPDSQWILYARSLPSLEDA 472

Query: 373 IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
             +      +   + +  S++  P +  SG+ L F+   D
Sbjct: 473 AFLYSIATGKTTQITDGMSHVTNPVFDKSGKYLYFTASTD 512



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/379 (13%), Positives = 104/379 (27%), Gaps = 98/379 (25%)

Query: 153 KIAHTISDDIY---------QSITGEK----GDFNSRILFVSESVVSGIIKNSLCVMDRD 199
           +IA   +DDI+         + +T       G F S          +      +  +   
Sbjct: 38  QIAFRYADDIWLVSRDGGAARRLTSTSNITDGPFFSPDGNTIAYSATAAGNTDIYTIPAT 97

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD--EDILRVYLMDTRIDRAPKRIGNFR 257
           G   + +T  R    +   ++P+   +   +  +      ++Y +       P+R+    
Sbjct: 98  GGAPKRIT-YRPGGNYVTGWTPDGHDLLMQSMQNAVRVYFQLYRVHADGSGLPERLPLPS 156

Query: 258 SMILAPRFSSNGKRALI------------SVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           +       S +G                   +  +   ++ VDL++    ++      + 
Sbjct: 157 AWYG--TLSPDGSHLAYNPWLQWQEESWKRYRGGQTQPVWIVDLKTLDRIKIPRENSNDR 214

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---------SQDKEASYF------ 350
              +      + F SDR G   L+       + K++         +     +        
Sbjct: 215 YPLWL--GDSVYFLSDRNGPTSLFRYDVKSKEVKQLVENHGFELKTLAGRGNTLVYEQFG 272

Query: 351 ---------------------------------------DPVWSPQGDLIAFTKFSGEKF 371
                                                  +   SP G    F        
Sbjct: 273 TIHLYDLTGGADHLVNISLDGDLPSLVPHLAKISSGEIQNADISPTGVRAVFEAHGD--- 329

Query: 372 AIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            I  +  +    R L   S    +AP WSP G+ + +     G+   KLY  D +G +  
Sbjct: 330 -IFTVPAEKGDVRNLTNSSGSAERAPAWSPDGKRIAYFSDATGE--YKLYLRDQDGLSAP 386

Query: 430 LI----NTPAYASDPQWVG 444
            +      P Y   P W  
Sbjct: 387 KVIDLGPDPTYYYSPTWSP 405



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 57/287 (19%), Positives = 109/287 (37%), Gaps = 30/287 (10%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R   +SE+ ++    + + ++ RDG   R LT S   I   P FSP+   +AY+     +
Sbjct: 30  RAPSISETQIAFRYADDIWLVSRDGGAARRLT-STSNITDGPFFSPDGNTIAYSATAAGN 88

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE---AMDIYSVDLQS- 291
              +Y +      APKRI           ++ +G   L+   ++       +Y V     
Sbjct: 89  T-DIYTI-PATGGAPKRITYRPGGNYVTGWTPDGHDLLMQSMQNAVRVYFQLYRVHADGS 146

Query: 292 NATERLTNTLFINISASYSPDSSQIVFE-----------SDREGKEQ-LYVMQSNGSDQK 339
              ERL          + SPD S + +              R G+ Q ++++     D+ 
Sbjct: 147 GLPERLPLPSAWY--GTLSPDGSHLAYNPWLQWQEESWKRYRGGQTQPVWIVDLKTLDRI 204

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           +I   + ++   P+W   GD + F        ++        + + LVE+   +  T + 
Sbjct: 205 KI-PRENSNDRYPLWL--GDSVYFLSDRNGPTSLFRYDVKSKEVKQLVENHGFELKTLAG 261

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            G +L++      +    ++  DL G  + L+N       P  V  +
Sbjct: 262 RGNTLVY------EQFGTIHLYDLTGGADHLVNISLDGDLPSLVPHL 302



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 97/303 (32%), Gaps = 84/303 (27%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA-----------TYDDEDILRVY 240
            L  +  DG+ +    P      +    SP+   +AY             Y       V+
Sbjct: 137 QLYRVHADGSGLPERLPLPS--AWYGTLSPDGSHLAYNPWLQWQEESWKRYRGGQTQPVW 194

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ---------- 290
           ++D +     K I    S    P +   G        ++    ++  D++          
Sbjct: 195 IVDLKTLDRIK-IPRENSNDRYPLWL--GDSVYFLSDRNGPTSLFRYDVKSKEVKQLVEN 251

Query: 291 ----------------------------SNATERLTNTLFINISAS-------------- 308
                                       +   + L N        S              
Sbjct: 252 HGFELKTLAGRGNTLVYEQFGTIHLYDLTGGADHLVNISLDGDLPSLVPHLAKISSGEIQ 311

Query: 309 ---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               SP   + VFE+  +    ++ + +   D + ++    ++   P WSP G  IA+  
Sbjct: 312 NADISPTGVRAVFEAHGD----IFTVPAEKGDVRNLTNSSGSAERAPAWSPDGKRIAYFS 367

Query: 366 FSGEKFAIGVMKKDG-SQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +  ++ + +  +DG S  +++    + +   +PTWSP  + ++FS     D    L+ +
Sbjct: 368 DATGEYKLYLRDQDGLSAPKVIDLGPDPTYYYSPTWSPDSKRIVFS-----DKRLNLWYV 422

Query: 422 DLN 424
           +++
Sbjct: 423 NVD 425



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 54/258 (20%), Positives = 100/258 (38%), Gaps = 26/258 (10%)

Query: 128 FRLWDVKDRK-QIIGKKFFSS-PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
             L+D+      ++        P+    +A   S +I  +     G    R +F      
Sbjct: 274 IHLYDLTGGADHLVNISLDGDLPSLVPHLAKISSGEIQNADISPTGV---RAVF------ 324

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  +  +  +  ++R LT S       P +SP+ +++AY + D     ++YL D  
Sbjct: 325 --EAHGDIFTVPAEKGDVRNLTNSSGSAERAPAWSPDGKRIAYFS-DATGEYKLYLRDQD 381

Query: 246 IDRAPKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TN- 299
              APK I  G   +   +P +S + KR + S  K   +   +VD      + +   T+ 
Sbjct: 382 GLSAPKVIDLGPDPTYYYSPTWSPDSKRIVFS-DKRLNLWYVNVDPALGPAKPIKVDTDL 440

Query: 300 ---TLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                    SAS+SPDS  I++  S    ++  ++         +I+ D  +   +PV+ 
Sbjct: 441 REGFGPAGFSASFSPDSQWILYARSLPSLEDAAFLYSIATGKTTQIT-DGMSHVTNPVFD 499

Query: 356 PQGDLIAFTKFSGEKFAI 373
             G  + FT  +    AI
Sbjct: 500 KSGKYLYFTASTDIGPAI 517


>gi|332708271|ref|ZP_08428252.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332352936|gb|EGJ32495.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1691

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 55/250 (22%), Positives = 101/250 (40%), Gaps = 20/250 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S    +++ +  RDG  ++ L   ++Q+ F   FSP+ Q +A A+ D      + L    
Sbjct: 1072 SASADSTIKLWQRDGRLLKTLRGHKNQV-FNISFSPDGQTIAAASKDG----TIQLWHPN 1126

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              R  K +  F        FS +GK   I+  +D  + ++  +L S+  +         +
Sbjct: 1127 GTR-IKTLTRFGPANFGISFSPDGKSLAIA-SEDGTIKLW--NLHSSWPKIFNRHARGVL 1182

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S  +SPD   +   S  +G  +L+    +G +   I        +   +SP G L+A   
Sbjct: 1183 SVCFSPDGQMLASGS-WDGTAKLW--NIDGKELNSIDNYGL-PVYRVRFSPDGQLLALAS 1238

Query: 366  FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                   I +   DG + + L     ++   ++SP GR L  +     D   +L+S+   
Sbjct: 1239 KDN---RIRLYNLDGIKLKTLRGHKGSVCGVSFSPDGRLLASASV---DKTIRLWSLKGI 1292

Query: 425  GRNETLINTP 434
            G N    +T 
Sbjct: 1293 GLNTQQSHTG 1302



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 48/238 (20%), Positives = 90/238 (37%), Gaps = 20/238 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ +   DG  +        + +F   FSPN +  A A+ D      + L   R
Sbjct: 1031 SASEDGTIRIWGIDGKAL-TSCRGHKEQVFSINFSPNGEMFASASADS----TIKLWQ-R 1084

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              R  K +   ++ +    FS +G+    +  KD  + ++         + LT     N 
Sbjct: 1085 DGRLLKTLRGHKNQVFNISFSPDGQTIA-AASKDGTIQLW--HPNGTRIKTLTRFGPANF 1141

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              S+SPD   +   S+ +G  +L+ +    S   +I            +SP G ++A   
Sbjct: 1142 GISFSPDGKSLAIASE-DGTIKLWNLH---SSWPKIFNRHARGVLSVCFSPDGQMLASGS 1197

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            + G      +   DG +   +      +    +SP G+ L  + K   D   +LY++D
Sbjct: 1198 WDGTA---KLWNIDGKELNSIDNYGLPVYRVRFSPDGQLLALASK---DNRIRLYNLD 1249



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 97/238 (40%), Gaps = 20/238 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    +  + + DG  +  +  +    ++  RFSP+ Q +A A+ D+   +R+Y +D  
Sbjct: 1195 SGSWDGTAKLWNIDGKELNSI-DNYGLPVYRVRFSPDGQLLALASKDNR--IRLYNLD-- 1249

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 K +   +  +    FS +G+    S   D+ + ++S+      T++  +     I
Sbjct: 1250 -GIKLKTLRGHKGSVCGVSFSPDGRLLA-SASVDKTIRLWSLKGIGLNTQQ--SHTGKLI 1305

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               ++    Q    S+    + + +    G+   R     +AS     +SP+  L+A   
Sbjct: 1306 GFCFNSTGQQYASASE---DKTVKLWNLEGT-LLRTFSGHQASVRSVSFSPKAKLLATAS 1361

Query: 366  FSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              G    I +   +G+  +       ++++ ++SP G+ L        D   KL+ ID
Sbjct: 1362 VDG---IIKIWHLNGALLQTFPAHGLSIRSLSFSPDGKILA---SAGNDRIIKLWGID 1413


>gi|288922582|ref|ZP_06416761.1| serine/threonine protein kinase with PASTA sensor(s) [Frankia sp.
           EUN1f]
 gi|288346056|gb|EFC80406.1| serine/threonine protein kinase with PASTA sensor(s) [Frankia sp.
           EUN1f]
          Length = 497

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 53/261 (20%), Positives = 100/261 (38%), Gaps = 24/261 (9%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +F   +  S I  + + V+D  G N R L    +     P  SP+  +VAY   D E   
Sbjct: 243 VFKRYAADSSINVSPIVVVDPTG-NERLLGLGDN-----PVLSPDASRVAYTNADGE--- 293

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +  + T    + +          +P FS +G     +        +Y+V+   +   R 
Sbjct: 294 -ITSVRTDGTDSRQVSDEPNGSSDSPAFSPDGGTIAYARNIGG---VYAVNADGSGNRRR 349

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWS 355
             T+      ++S  +  ++    R   + +YV+  +  + +R+  S    A   +P WS
Sbjct: 350 LATVSDAYELAWSTSNQIVL---RRGDDQSIYVLSVDDGNLRRLAGSPVPGAGAVEPAWS 406

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF---SRKKDG 412
           P G  +AF   +G    I ++  DGS  R      +   P+WSP G  +     S  +  
Sbjct: 407 PDGGAVAFGVSTGGG--IYLVNADGSGLRQAAGPGS-WHPSWSPQGALVYVQDGSAARFF 463

Query: 413 DTGSKLYSIDLNGRNETLINT 433
                +  ++ +G     ++ 
Sbjct: 464 GANGTMRMMNPDGTGNRQLDG 484



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 49/238 (20%), Positives = 97/238 (40%), Gaps = 24/238 (10%)

Query: 171 GDFNSRILFVSESVVS-GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           G  ++ +L    S V+       +  +  DG + R ++   +     P FSP+   +AYA
Sbjct: 271 GLGDNPVLSPDASRVAYTNADGEITSVRTDGTDSRQVSDEPNGSSDSPAFSPDGGTIAYA 330

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                +I  VY ++       +R+    S      +S++ +   I +++ +   IY + +
Sbjct: 331 ----RNIGGVYAVNADGSGNRRRLATV-SDAYELAWSTSNQ---IVLRRGDDQSIYVLSV 382

Query: 290 QSNATERLTNTL---FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                 RL  +       +  ++SPD   + F     G   +Y++ ++GS  ++ +    
Sbjct: 383 DDGNLRRLAGSPVPGAGAVEPAWSPDGGAVAFGVSTGGG--IYLVNADGSGLRQAAGPGS 440

Query: 347 ASYFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WS 398
              + P WSPQG L+        +F G    + +M  DG+  R L +      P  W+
Sbjct: 441 ---WHPSWSPQGALVYVQDGSAARFFGANGTMRMMNPDGTGNRQL-DGRLASGPVRWA 494



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 87/222 (39%), Gaps = 28/222 (12%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMIL------APRFSSNGKRALISVQKDEAMDIYSVD 288
            + + Y  D+ I+ +P  + +             P  S +  R   +   +   +I SV 
Sbjct: 242 RVFKRYAADSSINVSPIVVVDPTGNERLLGLGDNPVLSPDASRVAYT---NADGEITSVR 298

Query: 289 LQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKE 346
                + ++++     + S ++SPD   I +  +  G   +Y + ++G  +++R++   +
Sbjct: 299 TDGTDSRQVSDEPNGSSDSPAFSPDGGTIAYARNIGG---VYAVNADGSGNRRRLATVSD 355

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGR 402
           A  ++  WS    ++      G+  +I V+  D    R L    V  +    P WSP G 
Sbjct: 356 A--YELAWSTSNQIVL---RRGDDQSIYVLSVDDGNLRRLAGSPVPGAGAVEPAWSPDGG 410

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           ++ F     G     +Y ++ +G        P  +  P W  
Sbjct: 411 AVAFGVSTGGG----IYLVNADGSGLRQAAGPG-SWHPSWSP 447


>gi|114775409|ref|ZP_01450977.1| hypothetical protein SPV1_03753 [Mariprofundus ferrooxydans PV-1]
 gi|114553520|gb|EAU55901.1| hypothetical protein SPV1_03753 [Mariprofundus ferrooxydans PV-1]
          Length = 363

 Score =  102 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 51/290 (17%), Positives = 101/290 (34%), Gaps = 57/290 (19%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           RV  +G   L V          K II ++   +        + +SD   Q +        
Sbjct: 63  RVSPDGNHLLVVS-----THRGKSIISQRMLENGDP----INVVSDYDQQVMDSAAWYGP 113

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------- 227
            ++ F+S    S      L     DG ++R L    D  L  P    N + +        
Sbjct: 114 DKVTFLSYRENS----LDLWEKPVDGGSVRKLYRRLDGELRFPVLLNNGEMIVARMTPKH 169

Query: 228 --------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                         +  +D       Y +    ++  +++ +  S    P  S +G R +
Sbjct: 170 GTAVGHRGRQTEATFIDWDRRG--YQYNLTLITEQGAEKVLSPGSN---PALSPDGSRLV 224

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----------- 322
            ++Q      ++ ++   +   +LT+   ++    +SPD S I F S+R           
Sbjct: 225 FTMQDGHFWHLFMMNTDGSDLVQLTSGEHVDAQPVWSPDGSWIAFTSNRGDEDEDDKDGG 284

Query: 323 -----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
                +    ++++  +GS+  R++ +K AS   P ++  G  I F    
Sbjct: 285 HSSKQQRNWDIWLIGRDGSNLTRLTTNK-ASDGAPSFANNGR-IYFHSDR 332



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 88/290 (30%), Gaps = 65/290 (22%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G +   LT    +    PR SP+   +   +      +    M          + ++   
Sbjct: 45  GDHASLLTLEPGENEMYPRVSPDGNHLLVVSTHRGKSIISQRM-LENGDPINVVSDYDQQ 103

Query: 260 ILAPR--FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN------------------ 299
           ++     +  +  +      ++ ++D++   +   +  +L                    
Sbjct: 104 VMDSAAWYGPD--KVTFLSYRENSLDLWEKPVDGGSVRKLYRRLDGELRFPVLLNNGEMI 161

Query: 300 -------------TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                               A++         + DR G +    + +    +K +S    
Sbjct: 162 VARMTPKHGTAVGHRGRQTEATFI--------DWDRRGYQYNLTLITEQGAEKVLSPG-- 211

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLI 405
               +P  SP G  + FT   G  + + +M  DGS    L    ++ A P WSP G  + 
Sbjct: 212 ---SNPALSPDGSRLVFTMQDGHFWHLFMMNTDGSDLVQLTSGEHVDAQPVWSPDGSWIA 268

Query: 406 FSRKKDG--------------DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           F+  +                     ++ I  +G N T + T   ASD  
Sbjct: 269 FTSNRGDEDEDDKDGGHSSKQQRNWDIWLIGRDGSNLTRLTTN-KASDGA 317



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 78/231 (33%), Gaps = 34/231 (14%)

Query: 245 RIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF- 302
                   +          PR S +G   L+         I    L++     + +    
Sbjct: 43  DAGDHASLLTLEPGENEMYPRVSPDGNHLLVVSTHRGKSIISQRMLENGDPINVVSDYDQ 102

Query: 303 --INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             ++ +A Y PD  ++ F S RE    L+    +G   +++ +  +     PV    G++
Sbjct: 103 QVMDSAAWYGPD--KVTFLSYRENSLDLWEKPVDGGSVRKLYRRLDGELRFPVLLNNGEM 160

Query: 361 IA---------FTKFSGEKFAIGVMKKDGSQER----LLVEDSNLQA------PTWSPSG 401
           I               G +     +  D    +    L+ E    +       P  SP G
Sbjct: 161 IVARMTPKHGTAVGHRGRQTEATFIDWDRRGYQYNLTLITEQGAEKVLSPGSNPALSPDG 220

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGF 445
             L+F+  +DG     L+ ++ +G +   + +       P ++ D  W+ F
Sbjct: 221 SRLVFT-MQDGHF-WHLFMMNTDGSDLVQLTSGEHVDAQPVWSPDGSWIAF 269


>gi|312129903|ref|YP_003997243.1| wd40-like beta propeller containing protein [Leadbetterella
           byssophila DSM 17132]
 gi|311906449|gb|ADQ16890.1| WD40-like beta Propeller containing protein [Leadbetterella
           byssophila DSM 17132]
          Length = 1024

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 81/201 (40%), Gaps = 14/201 (6%)

Query: 227 AYATYDDEDILRVYLM--DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAMD 283
           A++     D+ + Y      R+  +P  +     + ++P  S +GK       KD  +M+
Sbjct: 256 AFSAKFKNDLKQYYTHFESNRVKTSPHELLASGDINISPALSPDGKYLAYVSSKDVLSMN 315

Query: 284 IYSVDL----------QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +Y  D                + + +  FI  + ++SPD+ ++      + K +L ++ +
Sbjct: 316 VYIADTKTKKVIKKINTDGFGQHVDSYSFIESTLTWSPDNKKVALVIQSKSKNKLLILDA 375

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNL 392
              D++  +     ++  P WSP  ++IA +     +  + +     G  E +  +  + 
Sbjct: 376 FQGDKREYALPDLDAFTHPAWSPHEEIIALSGMKNGQVDLYLYHLRSGKLEAVTSDRYSD 435

Query: 393 QAPTWSPSGRSLIFSRKKDGD 413
             P W+P G  + F   + G 
Sbjct: 436 VQPAWAPDGEHIYFVTDRGGS 456



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 55/299 (18%), Positives = 100/299 (33%), Gaps = 32/299 (10%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE-----SVVSGIIKNSLCVMDR 198
           +    A W  +     D+I + +  +   +  R  FV          S   KN L     
Sbjct: 211 YRWGQAFWAYVTGLYGDEIIRPLYKQVAIYGIREAFVRIFRMDLDAFSAKFKNDLKQYYT 270

Query: 199 DGANIRYLTPSRD-----QILFEPRFSPNQQKVAYATYDDEDILRVYLMD---------T 244
              + R  T   +      I   P  SP+ + +AY +  D   + VY+ D          
Sbjct: 271 HFESNRVKTSPHELLASGDINISPALSPDGKYLAYVSSKDVLSMNVYIADTKTKKVIKKI 330

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLF 302
             D   + + ++  +     +S + K+  + +Q      +  +D          L +   
Sbjct: 331 NTDGFGQHVDSYSFIESTLTWSPDNKKVALVIQSKSKNKLLILDAFQGDKREYALPDLDA 390

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                ++SP    I     + G+  LY+        + ++ D+  S   P W+P G+ I 
Sbjct: 391 F-THPAWSPHEEIIALSGMKNGQVDLYLYHLRSGKLEAVTSDR-YSDVQPAWAPDGEHIY 448

Query: 363 FTKFSGE-------KFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           F    G        K  I  +        +  L  + +L  P  SP G+ + F    DG
Sbjct: 449 FVTDRGGSERLEKEKLKIAKINLKTKAIEILPLFSEVDLYNPQVSPDGKIVYFLASPDG 507



 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 90/244 (36%), Gaps = 20/244 (8%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG        S   I     +SP+ +KVA           + L   + D+    + +  +
Sbjct: 333 DGFGQH--VDSYSFIESTLTWSPDNKKVALVIQSKSKNKLLILDAFQGDKREYALPDLDA 390

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
               P +S + +   +S  K+  +D+Y   L+S   E +T+  + ++  +++PD   I F
Sbjct: 391 FT-HPAWSPHEEIIALSGMKNGQVDLYLYHLRSGKLEAVTSDRYSDVQPAWAPDGEHIYF 449

Query: 319 ESDREGKEQ-------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            +DR G E+       +  +       + +    E   ++P  SP G ++ F        
Sbjct: 450 VTDRGGSERLEKEKLKIAKINLKTKAIEILPLFSEVDLYNPQVSPDGKIVYFLASPDGFR 509

Query: 372 AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            I   + +  Q   L            +SP+    +    + GD    L  +D    N  
Sbjct: 510 DIY--QLEDKQISRLTNFYTGITGITAYSPA----LSVASRSGDLVYNL--LDKGKYNLA 561

Query: 430 LINT 433
           L+ +
Sbjct: 562 LLPS 565



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 70/209 (33%), Gaps = 35/209 (16%)

Query: 270 KRALISVQKDEAMDIYSVDLQS----------------------NATERLTNTLFINISA 307
           K+  I   ++  + I+ +DL +                       +   L  +  INIS 
Sbjct: 235 KQVAIYGIREAFVRIFRMDLDAFSAKFKNDLKQYYTHFESNRVKTSPHELLASGDINISP 294

Query: 308 SYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRIS-QDKEASYFDP--------VWSPQ 357
           + SPD   + + S ++     +Y+  +      +    D    + D          WSP 
Sbjct: 295 ALSPDGKYLAYVSSKDVLSMNVYIADTKTKKVIKKINTDGFGQHVDSYSFIESTLTWSPD 354

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
              +A    S  K  + ++      +R   L +      P WSP    +  S  K+G   
Sbjct: 355 NKKVALVIQSKSKNKLLILDAFQGDKREYALPDLDAFTHPAWSPHEEIIALSGMKNGQVD 414

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVG 444
             LY +  +G+ E + +       P W  
Sbjct: 415 LYLYHLR-SGKLEAVTSDRYSDVQPAWAP 442


>gi|51893240|ref|YP_075931.1| acylamino-acid-releasing enzyme [Symbiobacterium thermophilum IAM
           14863]
 gi|51856929|dbj|BAD41087.1| acylamino-acid-releasing enzyme [Symbiobacterium thermophilum IAM
           14863]
          Length = 610

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 8/177 (4%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREG 324
           + +G+  L         +++ V  Q     +LT  T      A ++ D S+I F +D  G
Sbjct: 24  APDGESVLFVSDISGQFNLWRVASQGGWPRQLTLFTEDSVREAIFNKDGSRIAFLADHHG 83

Query: 325 KE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDG 380
            E  Q+Y+M + G   +RI+   +  Y    +SP G  +AF     + +   I +   + 
Sbjct: 84  DEQFQVYLMDAVGGWPERITDRPDVQYSLGGFSPCGRYLAFAGNAANPQDVDIYIYDLET 143

Query: 381 SQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPA 435
            + R L        A ++SP G  ++ + +  G+T   L  +D+  G    L     
Sbjct: 144 KETRQLTPGGGLRYAFSFSPDGSRIL-AVQFYGNTNQDLLLVDVATGEIRNLTAHEG 199



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 106/283 (37%), Gaps = 18/283 (6%)

Query: 172 DFNSRILFVSESVVSG---------IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            F +R +   +    G           + +L  +   G   R LT   +  + E  F+ +
Sbjct: 12  FFATRRIVAMQPAPDGESVLFVSDISGQFNLWRVASQGGWPRQLTLFTEDSVREAIFNKD 71

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALIS--VQKD 279
             ++A+      D      +   +   P+RI +   +  +   FS  G+    +      
Sbjct: 72  GSRIAFLADHHGDEQFQVYLMDAVGGWPERITDRPDVQYSLGGFSPCGRYLAFAGNAANP 131

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
           + +DIY  DL++  T +LT    +  + S+SPD S+I+         Q L ++     + 
Sbjct: 132 QDVDIYIYDLETKETRQLTPGGGLRYAFSFSPDGSRILAVQFYGNTNQDLLLVDVATGEI 191

Query: 339 KRIS--QDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKK-DGSQERLLVEDSNLQA 394
           + ++  + +E  +F   W   G    F    G +F  IG     +     +L  D +++ 
Sbjct: 192 RNLTAHEGREVKFFPGPWLKDGSGFYFATNDGREFQAIGFYSLAEDRWSYVLTADWDIEG 251

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              S   R + +   + G +  ++     +GR   L   P+  
Sbjct: 252 VALSADQRLMAYVVNEAGRSVVRVIE-RESGRPVDLPALPSGV 293



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 4/133 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFS 367
           +PD   ++F SD  G+  L+ + S G   ++++   E S  + +++  G  IAF      
Sbjct: 24  APDGESVLFVSDISGQFNLWRVASQGGWPRQLTLFTEDSVREAIFNKDGSRIAFLADHHG 83

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            E+F + +M   G     + +  ++Q     +SP GR L F+          +Y  DL  
Sbjct: 84  DEQFQVYLMDAVGGWPERITDRPDVQYSLGGFSPCGRYLAFAGNAANPQDVDIYIYDLET 143

Query: 426 RNETLINTPAYAS 438
           +    +       
Sbjct: 144 KETRQLTPGGGLR 156



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 106/289 (36%), Gaps = 14/289 (4%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R++     D + ++I  + G   SRI F+++    G  +  + +MD  G     +T   D
Sbjct: 53  RQLTLFTEDSVREAIFNKDG---SRIAFLADHH--GDEQFQVYLMDAVGGWPERITDRPD 107

Query: 212 QILFEPRFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
                  FSP  + +A+A    +   + +Y+ D    +  +++     +  A  FS +G 
Sbjct: 108 VQYSLGGFSPCGRYLAFAGNAANPQDVDIYIYDLET-KETRQLTPGGGLRYAFSFSPDGS 166

Query: 271 RA-LISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKE 326
           R   +    +   D+  VD+ +     LT      +      +  D S   F ++   + 
Sbjct: 167 RILAVQFYGNTNQDLLLVDVATGEIRNLTAHEGREVKFFPGPWLKDGSGFYFATNDGREF 226

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Q     S   D+       +        S    L+A+      +  + V++++  +   L
Sbjct: 227 QAIGFYSLAEDRWSYVLTADWDIEGVALSADQRLMAYVVNEAGRSVVRVIERESGRPVDL 286

Query: 387 VE--DSNLQAPTWSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                  +    ++    R+ +F +       + +Y +D++    T I 
Sbjct: 287 PALPSGVILDVQFAGRDTRNRLFLQMATYKEAATIYLLDIDAGTLTRIT 335


>gi|116331809|ref|YP_801527.1| Tol transport system component [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116125498|gb|ABJ76769.1| Tol transport system component [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 2587

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 101/266 (37%), Gaps = 49/266 (18%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DE 280
           + + + Y T   +    ++  D +       +    +    P  S +G + +   ++ D 
Sbjct: 65  DGRYLFYTT-GQKGNYDIWFRDLK-SSITVPVTAHPAPEFKPAISPDGTKLVFVSEQYDS 122

Query: 281 AMDIYSVDLQSN-------ATERLTNTLFI-----------------NISASYSPDSSQI 316
           + D+  +++            +R  N+ FI                 +    ++PD   +
Sbjct: 123 SGDLVLLEMNPGLWAEKILEGKRFINSDFIILTNRNFDVPGKKDSNVDTDPFFAPDCRHL 182

Query: 317 VFESDR--EGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKF----SGE 369
           VF +DR   G + L V+ + G +  K ++Q+  AS   PVWS  G  I +  +    SG+
Sbjct: 183 VFSTDRLTPGIQNLVVLDTEGKEPMKLLTQNGGAS---PVWSSDGKSIVYLSYQENPSGD 239

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-----KKDGDT----GSKLYS 420
            + + +M   G  ERL  +     +P+ S   R L ++       K+G       S +  
Sbjct: 240 VYLLDLMS--GKSERLTKDSYLNFSPSLSDDKRYLYYTSIQNDTNKNGRLDERDNSLIIR 297

Query: 421 IDL-NGRNETLINTPAYASDPQWVGF 445
            DL  G    L +      D ++  F
Sbjct: 298 KDLRTGEVRRLTSGNDSLFDSRFSSF 323



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/225 (19%), Positives = 88/225 (39%), Gaps = 28/225 (12%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T  +  P  +   R   L    +++G+    +  +    DI+  DL+S+ T  +T     
Sbjct: 41  TPENEKPFPLTVQRGNNLYNSTTADGRYLFYTTGQKGNYDIWFRDLKSSITVPVTAHPAP 100

Query: 304 NISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEAS------------ 348
               + SPD +++VF S   D  G   L  M      +K +   +  +            
Sbjct: 101 EFKPAISPDGTKLVFVSEQYDSSGDLVLLEMNPGLWAEKILEGKRFINSDFIILTNRNFD 160

Query: 349 ---------YFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                      DP ++P    + F+  + +     + V+  +G +   L+  +   +P W
Sbjct: 161 VPGKKDSNVDTDPFFAPDCRHLVFSTDRLTPGIQNLVVLDTEGKEPMKLLTQNGGASPVW 220

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQ 441
           S  G+S+++   ++  +G  +Y +DL +G++E L         P 
Sbjct: 221 SSDGKSIVYLSYQENPSG-DVYLLDLMSGKSERLTKDSYLNFSPS 264



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 77/195 (39%), Gaps = 13/195 (6%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N          +  +P F+P+ + + ++T      ++  ++     + P ++        
Sbjct: 158 NFDVPGKKDSNVDTDPFFAPDCRHLVFSTDRLTPGIQNLVVLDTEGKEPMKLLTQNGGA- 216

Query: 262 APRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +P +SS+GK  +  S Q++ + D+Y +DL S  +ERLT   ++N S S S D   + + S
Sbjct: 217 SPVWSSDGKSIVYLSYQENPSGDVYLLDLMSGKSERLTKDSYLNFSPSLSDDKRYLYYTS 276

Query: 321 -----------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                      D      +        + +R++   ++ +     S  G  I FT     
Sbjct: 277 IQNDTNKNGRLDERDNSLIIRKDLRTGEVRRLTSGNDSLFDSRFSSFNGGSILFTAAYYN 336

Query: 370 KFAIGVMKKDGSQER 384
              I  +   G+  +
Sbjct: 337 TLNIYFIPASGAVPK 351



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 97/292 (33%), Gaps = 49/292 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + R LF +           +   D   ++I     +     F+P  SP+  K+ + +   
Sbjct: 65  DGRYLFYTT---GQKGNYDIWFRDLK-SSITVPVTAHPAPEFKPAISPDGTKLVFVSEQY 120

Query: 234 EDILRVYLMDTRIDRAPKRIGNFR-----------------------SMILAPRFSSNGK 270
           +    + L++       ++I   +                       ++   P F+ + +
Sbjct: 121 DSSGDLVLLEMNPGLWAEKILEGKRFINSDFIILTNRNFDVPGKKDSNVDTDPFFAPDCR 180

Query: 271 RALISVQK--DEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREG-KE 326
             + S  +      ++  +D +     + LT       S  +S D   IV+ S +E    
Sbjct: 181 HLVFSTDRLTPGIQNLVVLDTEGKEPMKLLTQNGG--ASPVWSSDGKSIVYLSYQENPSG 238

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-----------EKFAIGV 375
            +Y++       +R+++D   + F P  S     + +T               +   I  
Sbjct: 239 DVYLLDLMSGKSERLTKDSYLN-FSPSLSDDKRYLYYTSIQNDTNKNGRLDERDNSLIIR 297

Query: 376 MKKDGSQERLLVEDSNLQAPT-WSP-SGRSLIFSRKKDGDTGSKLYSIDLNG 425
                 + R L   ++    + +S  +G S++F+          +Y I  +G
Sbjct: 298 KDLRTGEVRRLTSGNDSLFDSRFSSFNGGSILFTAAYYNT--LNIYFIPASG 347



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 27/177 (15%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               LT     N+  S + D   + + + ++G   ++      S    ++    A  F P
Sbjct: 46  KPFPLTVQRGNNLYNSTTADGRYLFYTTGQKGNYDIWFRDLKSSITVPVT-AHPAPEFKP 104

Query: 353 VWSPQGDLIAFTK---FSGEKFAIGVMKKD-------------GSQERLLV--------- 387
             SP G  + F      S     +  M                 S   +L          
Sbjct: 105 AISPDGTKLVFVSEQYDSSGDLVLLEMNPGLWAEKILEGKRFINSDFIILTNRNFDVPGK 164

Query: 388 -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            + +    P ++P  R L+FS  +       L  +D  G+    + T    + P W 
Sbjct: 165 KDSNVDTDPFFAPDCRHLVFSTDRLTPGIQNLVVLDTEGKEPMKLLTQNGGASPVWS 221



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 69/176 (39%), Gaps = 17/176 (9%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            ++F ++ +  GI    L V+D +G     L          P +S + + + Y +Y +  
Sbjct: 181 HLVFSTDRLTPGIQN--LVVLDTEGKEPMKLLTQNGGA--SPVWSSDGKSIVYLSYQENP 236

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-----------I 284
              VYL+D    +  +R+     +  +P  S + +    +  +++              I
Sbjct: 237 SGDVYLLDLMSGK-SERLTKDSYLNFSPSLSDDKRYLYYTSIQNDTNKNGRLDERDNSLI 295

Query: 285 YSVDLQSNATERLTNTLFINISASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQK 339
              DL++    RLT+       + +S  +   I+F +       +Y + ++G+  K
Sbjct: 296 IRKDLRTGEVRRLTSGNDSLFDSRFSSFNGGSILFTAAYYNTLNIYFIPASGAVPK 351


>gi|212634703|ref|YP_002311228.1| peptidase S9, prolyl oligopeptidase active site region:WD40-like
           Beta Propeller [Shewanella piezotolerans WP3]
 gi|212556187|gb|ACJ28641.1| Peptidase S9, prolyl oligopeptidase active site region:WD40-like
           Beta Propeller [Shewanella piezotolerans WP3]
          Length = 694

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 82/268 (30%), Gaps = 54/268 (20%)

Query: 221 PNQQKVAYATYDDE---DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
               +V +     +   D     +     D+    + N      +P  S +  +      
Sbjct: 58  NKGDEVYFVRNYMDILTDKKLGNIWKVDKDKNLTPVTNGLHSDFSPVLSPDNTKLAYIST 117

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-------------- 323
              +  I+   L++ A+ ++++      + S+SPD   + F    +              
Sbjct: 118 ASGSAQIHMQWLETGASGQMSHLDHAPSNISWSPDGKYLAFTRFVDTQAKSVVTLPGKPK 177

Query: 324 --------------------------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                                     G  Q++VM ++G   ++++           WS  
Sbjct: 178 NAKWAKPAVYVDEMYYRFDGAGFTKPGNSQIFVMSADGGAARQLTYGTTDHRSHLSWSKD 237

Query: 358 GDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFS-- 407
           G  I ++  +            I  +     Q   L   +     P  SP+G+ + +   
Sbjct: 238 GQQIIYSANTRNDSELEWTDSNIYTLNIASLQSTPLTSRNGPDNHPIVSPNGKMIAYLGS 297

Query: 408 -RKKDGDTGSKLYSIDLNGRNETLINTP 434
            +       ++LY ++L+G ++  +   
Sbjct: 298 DQNYKNYENTELYIMNLDGSDKRSLTAN 325



 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 103/312 (33%), Gaps = 64/312 (20%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDT 244
           +     ++  +D+D  N+  +T       F P  SP+  K+AY +       + +  ++T
Sbjct: 74  TDKKLGNIWKVDKD-KNLTPVTNGLHS-DFSPVLSPDNTKLAYISTASGSAQIHMQWLET 131

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD------------------------- 279
                   + +  S I    +S +GK    +   D                         
Sbjct: 132 GASGQMSHLDHAPSNI---SWSPDGKYLAFTRFVDTQAKSVVTLPGKPKNAKWAKPAVYV 188

Query: 280 ---------------EAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESD-- 321
                              I+ +     A  +LT     + S  S+S D  QI++ ++  
Sbjct: 189 DEMYYRFDGAGFTKPGNSQIFVMSADGGAARQLTYGTTDHRSHLSWSKDGQQIIYSANTR 248

Query: 322 -----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKF--- 371
                      +Y +         ++  +      P+ SP G +IA+  +  + + +   
Sbjct: 249 NDSELEWTDSNIYTLNIASLQSTPLTS-RNGPDNHPIVSPNGKMIAYLGSDQNYKNYENT 307

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + +M  DGS +R L  + +    +  W+ + +++ +    D       Y   LNG+   
Sbjct: 308 ELYIMNLDGSDKRSLTANFDRSVNSIQWANNSKAV-YMSYHDRGQTYVAYQ-PLNGKKRI 365

Query: 430 LINTPAYASDPQ 441
           +       S  +
Sbjct: 366 VAKNLGGLSFGR 377



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 102/325 (31%), Gaps = 67/325 (20%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-- 231
           N+++ ++S +  S  I          G          D       +SP+ + +A+  +  
Sbjct: 109 NTKLAYISTASGSAQIHMQWLETGASGQ-----MSHLDHAPSNISWSPDGKYLAFTRFVD 163

Query: 232 -------------------------------------DDEDILRVYLMDTRIDRAPKRIG 254
                                                      ++++M      A +   
Sbjct: 164 TQAKSVVTLPGKPKNAKWAKPAVYVDEMYYRFDGAGFTKPGNSQIFVMSADGGAARQLTY 223

Query: 255 NFRSMILAPRFSSNGKRALISVQ-------KDEAMDIYSVDLQSNATERLTNTLFINISA 307
                     +S +G++ + S         +    +IY++++ S  +  LT+    +   
Sbjct: 224 GTTDHRSHLSWSKDGQQIIYSANTRNDSELEWTDSNIYTLNIASLQSTPLTSRNGPDNHP 283

Query: 308 SYSPDSSQIVF-ESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             SP+   I +  SD+  K     +LY+M  +GSD++ ++ + + S     W+     + 
Sbjct: 284 IVSPNGKMIAYLGSDQNYKNYENTELYIMNLDGSDKRSLTANFDRSVNSIQWANNSKAVY 343

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PT------WSPSGRSLIFSRKKDGDT 414
            +     +  +     +G +  +      L    P        S +G  + F+       
Sbjct: 344 MSYHDRGQTYVAYQPLNGKKRIVAKNLGGLSFGRPYTGSEFDVSQNGT-IAFTYSDPQRP 402

Query: 415 GSKLYSIDLNGRNETLINTPAYASD 439
                SI+  GR   L    + A D
Sbjct: 403 AD--ISINRKGRTSQLTTLNSDALD 425



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 98/296 (33%), Gaps = 40/296 (13%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI-SDDIYQSITGEKGDFN 174
           +      +     R  D + +  +        P + +     +  D++Y           
Sbjct: 147 ISWSPDGKYLAFTRFVDTQAKSVV---TLPGKPKNAKWAKPAVYVDEMYYRF-------- 195

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                   +  +    + + VM  DG   R LT           +S + Q++ Y+     
Sbjct: 196 ------DGAGFTKPGNSQIFVMSADGGAARQLTYGTTDHRSHLSWSKDGQQIIYSANTRN 249

Query: 235 DI------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-----KDEAMD 283
           D         +Y ++         + +       P  S NGK              E  +
Sbjct: 250 DSELEWTDSNIYTLNI-ASLQSTPLTSRNGPDNHPIVSPNGKMIAYLGSDQNYKNYENTE 308

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-- 341
           +Y ++L  +    LT     ++++    ++S+ V+ S  + + Q YV     + +KRI  
Sbjct: 309 LYIMNLDGSDKRSLTANFDRSVNSIQWANNSKAVYMSYHD-RGQTYVAYQPLNGKKRIVA 367

Query: 342 ------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                 S  +  +  +   S  G  IAFT    ++ A   + + G   +L   +S+
Sbjct: 368 KNLGGLSFGRPYTGSEFDVSQNGT-IAFTYSDPQRPADISINRKGRTSQLTTLNSD 422


>gi|20090590|ref|NP_616665.1| cell surface protein [Methanosarcina acetivorans C2A]
 gi|19915623|gb|AAM05145.1| cell surface protein [Methanosarcina acetivorans C2A]
          Length = 970

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 52/333 (15%), Positives = 111/333 (33%), Gaps = 28/333 (8%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS-DDIYQSITGEKGDFNSRILF 179
                V      V +      + +    +   +     +     +S       +  +I+F
Sbjct: 524 SGAYTVNLT---VNNANGTFSRLYPIVASDRPQYTLKEAQITTNKSNQTMPAIYRDKIVF 580

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE--PRFSPNQQKVAYATYDDEDIL 237
             +   +G  + ++ V D   +    +T           P       ++ +  Y      
Sbjct: 581 FDDR--TGRGRYNIYVYDLSTSRETQITTDNSHYNLNTVPAIY--GDRIVWQEYRSTSSP 636

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEAMDIYSVDLQSNATE 295
            V                 +       F  +  G R + +  ++   DIY  DL ++   
Sbjct: 637 SVLDRSDIHMYDLSTSKEIQITNSGKAFYPDIYGDRIVWTDTRNGNGDIYMYDLSASKET 696

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYF 350
           R+T       + S      +IV++  R GK       +Y+   + S + RI+ +    Y+
Sbjct: 697 RITTNESHQDNPSIY--GDRIVWQDSRNGKGSYNPTDIYMYNISTSTETRITTNNSNQYY 754

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
             V+   GD I +      K  I +     ++E  +   +  L+   ++  G  +++   
Sbjct: 755 PAVY---GDNIVWKDNRNGKGEIYMYNLSTTKETQITINNGFLED--FAIYGDRMVWVDD 809

Query: 410 KDGDTGSKLYSIDLNGRNETLINTP-AYASDPQ 441
           ++    + +Y  DL+   ET I T  +  SDP 
Sbjct: 810 RN--RNADIYMYDLSTNAETQITTNKSEQSDPA 840



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 47/156 (30%), Gaps = 9/156 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                 +  +   S +         + + +   +    +T +     +   +      + 
Sbjct: 707 NPSIYGDRIVWQDSRNGKGSYNPTDIYMYNISTSTETRITTNNSNQYYPAVY---GDNIV 763

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +    +     +Y+ +    +  +   N         F+  G R +    ++   DIY  
Sbjct: 764 WKDNRNGKG-EIYMYNLSTTKETQITIN---NGFLEDFAIYGDRMVWVDDRNRNADIYMY 819

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           DL +NA  ++T         +      +IV+   R 
Sbjct: 820 DLSTNAETQITTNKSEQSDPAIY--GDRIVWTDWRN 853


>gi|116625880|ref|YP_828036.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229042|gb|ABJ87751.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 501

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 60/160 (37%), Gaps = 14/160 (8%)

Query: 258 SMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                P FS +G     S      +  DIY   + +    RLT     + S  +SPD   
Sbjct: 342 GSEWDPAFSPDGNLLAFSWAGPNRDNYDIYVQQIGAGTPLRLTTDPGEDRSPVFSPDGRY 401

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAI 373
           I F  +      L ++ + G  ++++S    A+     +SP G  IA +    +G+   +
Sbjct: 402 IAFTRNE---RTLILVPALGGPERKLSLVGAANI---DFSPDGKTIAISDRESAGDPLGL 455

Query: 374 GVMKKDGSQERLLVED----SNLQAPTWSPSGRSLIFSRK 409
            ++  +    + L            P +S  G+ + F R 
Sbjct: 456 FLVSIETGNRQRLTTAPPGIGGDTTPKFSLDGQRIAFERN 495



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 61/161 (37%), Gaps = 13/161 (8%)

Query: 212 QILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
              ++P FSP+   +A++      D   +Y+        P R+        +P FS +G+
Sbjct: 342 GSEWDPAFSPDGNLLAFSWAGPNRDNYDIYVQQIGAGT-PLRLTTDPGEDRSPVFSPDGR 400

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKE-Q 327
               +        +  V        +L+     NI   +SPD   I   SDRE  G    
Sbjct: 401 YIAFTRN---ERTLILVPALGGPERKLSLVGAANID--FSPDGKTIA-ISDRESAGDPLG 454

Query: 328 LYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKF 366
           L+++     +++R++           P +S  G  IAF + 
Sbjct: 455 LFLVSIETGNRQRLTTAPPGIGGDTTPKFSLDGQRIAFERN 495



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 11/145 (7%)

Query: 300 TLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +       ++SPD + + F     +R+    +YV Q       R++ D       PV+SP
Sbjct: 340 SFGSEWDPAFSPDGNLLAFSWAGPNRD-NYDIYVQQIGAGTPLRLTTD-PGEDRSPVFSP 397

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  IAFT+       + ++   G  ER L          +SP G+++  S ++      
Sbjct: 398 DGRYIAFTRNERT---LILVPALGGPERKLSLVGAANI-DFSPDGKTIAISDRESAGDPL 453

Query: 417 KLYSIDLNGRNETLINT--PAYASD 439
            L+ + +   N   + T  P    D
Sbjct: 454 GLFLVSIETGNRQRLTTAPPGIGGD 478



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 53/142 (37%), Gaps = 13/142 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   + V    GA       +       P FSP+ + +A+   +     R  ++  
Sbjct: 362 GPNRDNYDIYVQQI-GAGTPLRLTTDPGEDRSPVFSPDGRYIAFTRNE-----RTLILVP 415

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTL- 301
            +    +++    +  +   FS +GK   IS      + + ++ V +++   +RLT    
Sbjct: 416 ALGGPERKLSLVGAANI--DFSPDGKTIAISDRESAGDPLGLFLVSIETGNRQRLTTAPP 473

Query: 302 --FINISASYSPDSSQIVFESD 321
               + +  +S D  +I FE +
Sbjct: 474 GIGGDTTPKFSLDGQRIAFERN 495



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 8/100 (8%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKD-GSQERLLVEDSNLQAPTW 397
           +      S +DP +SP G+L+AF+        + I V +   G+  RL  +    ++P +
Sbjct: 336 VPFASFGSEWDPAFSPDGNLLAFSWAGPNRDNYDIYVQQIGAGTPLRLTTDPGEDRSPVF 395

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           SP GR + F+R +       L  +   G  E  ++    A
Sbjct: 396 SPDGRYIAFTRNE-----RTLILVPALGGPERKLSLVGAA 430



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 21/78 (26%), Gaps = 1/78 (1%)

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GR 426
           G  +  G       +        +   P +SP G  L FS          +Y   +  G 
Sbjct: 320 GGWWKFGREHLPTLKIVPFASFGSEWDPAFSPDGNLLAFSWAGPNRDNYDIYVQQIGAGT 379

Query: 427 NETLINTPAYASDPQWVG 444
              L   P     P +  
Sbjct: 380 PLRLTTDPGEDRSPVFSP 397


>gi|281410777|gb|ADA68802.1| HET-E [Podospora anserina]
          Length = 462

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 87/266 (32%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 144 QRVASGSGDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQRVASGSGDK----TIKI 199

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 200 WDTASGTCTQTLEGHGGSVWSVAFSPDGQRVA-SGSDDKTIKIW--DTASGTCTQTLEGH 256

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S  +SPD  ++   SD      + +  +      +  +          +SP G  
Sbjct: 257 GGWVQSVVFSPDGQRVASGSD---DHTIKIWDAVSGTCTQTLEGHGGWVHSVAFSPDGQR 313

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A     G    I +           +E     + +  +SP G+ +  S   DG    K 
Sbjct: 314 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGT--IKT 367

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 368 WDAASGTCTQTLEGHGGWVQSVAFSP 393



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 85/266 (31%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 186 QRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDK----TIKI 241

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 242 WDTASGTCTQTLEGHGGWVQSVVFSPDGQRVA-SGSDDHTIKIW--DAVSGTCTQTLEGH 298

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S       + +  +      +  +          +SP G  
Sbjct: 299 GGWVHSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQR 355

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A     G    I             +E     +Q+  +SP G+ +        D   K+
Sbjct: 356 VASGSIDGT---IKTWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVA---SGSSDKTIKI 409

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 410 WDTASGTCTQTLEGHGGWVQSVAFSP 435



 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 92/264 (34%), Gaps = 15/264 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 60  QRVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDH----TIKI 115

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D       + +    S +L+  FS +G+R   S   D+ + I+  D  S    +     
Sbjct: 116 WDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA-SGSGDKTIKIW--DTASGTCTQTLEGH 172

Query: 302 FINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             ++ S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  
Sbjct: 173 GNSVWSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQR 229

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +A +    +   I         + L      +Q+  +SP G+ +        D   K++ 
Sbjct: 230 VA-SGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSD---DHTIKIWD 285

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
                  +TL     +     +  
Sbjct: 286 AVSGTCTQTLEGHGGWVHSVAFSP 309



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 89/266 (33%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 18  QRVASGSDDKTIKIWDTASGTGTQTLEGHGGTVWSVAFSPDGQRVASGSDDK----TIKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 74  WDAASGTCTQTLEGHGGRVQSVAFSPDGQRVA-SGSDDHTIKIW--DAASGTCTQTLEGH 130

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  
Sbjct: 131 GSSVLSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A          I +           +E    ++ +  +SP G+ +        D   K+
Sbjct: 188 VA---SGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSD---DKTIKI 241

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 242 WDTASGTCTQTLEGHGGWVQSVVFSP 267



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 75/225 (33%), Gaps = 12/225 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 228 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDH----TIKI 283

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 284 WDAVSGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGTIKIW--DAASGTCTQTLEGH 340

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S       +    +      +  +          +SP G  
Sbjct: 341 GGWVHSVAFSPDGQRVASGSI---DGTIKTWDAASGTCTQTLEGHGGWVQSVAFSPDGQR 397

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +A +  S +   I         + L      +Q+  +SP G+ + 
Sbjct: 398 VA-SGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVA 441



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 78/241 (32%), Gaps = 19/241 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ Q+VA  + D      + + DT      + +      + +  FS
Sbjct: 1   LEGHGSSVLSVAFSPDGQRVASGSDDK----TIKIWDTASGTGTQTLEGHGGTVWSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
            +G+R   S   D+ + I+  D  S    + L        S ++SPD  ++   SD    
Sbjct: 57  PDGQRVA-SGSDDKTIKIW--DAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSD---D 110

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +  +      +  +   +S     +SP G  +A          I +          
Sbjct: 111 HTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA---SGSGDKTIKIWDTASGTCTQ 167

Query: 386 LVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +E       +  +SP G+ +       GD   K++        +TL           + 
Sbjct: 168 TLEGHGNSVWSVAFSPDGQRVA---SGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFS 224

Query: 444 G 444
            
Sbjct: 225 P 225



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 69/220 (31%), Gaps = 16/220 (7%)

Query: 170 KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G +   ++F    + V SG   +++ + D                +    FSP+ Q+VA
Sbjct: 256 HGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGGWVHSVAFSPDGQRVA 315

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D      + + D       + +      + +  FS +G+R   S   D  +  +  
Sbjct: 316 SGSIDG----TIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGTIKTW-- 368

Query: 288 DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D  S    + L        S ++SPD  ++   S     + + +  +      +  +   
Sbjct: 369 DAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS---DKTIKIWDTASGTCTQTLEGHG 425

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                  +SP G  +A          I +           
Sbjct: 426 GWVQSVAFSPDGQRVASGSSDNT---IKIWDTASGTCTQT 462



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 79/244 (32%), Gaps = 30/244 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDR---KQIIG-----KKFFSSPASWRKIA----HTIS--DDI 162
            +          ++WD       + + G     +    SP   R  +    HTI   D +
Sbjct: 228 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAV 287

Query: 163 YQSITGE---KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
             + T      G +   + F    + V SG I  ++ + D                +   
Sbjct: 288 SGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSV 347

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q+VA  + D      +   D       + +      + +  FS +G+R   S  
Sbjct: 348 AFSPDGQRVASGSIDG----TIKTWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVA-SGS 402

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D+ + I+  D  S    + L        S ++SPD  ++   S       + +  +   
Sbjct: 403 SDKTIKIW--DTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS---DNTIKIWDTASG 457

Query: 337 DQKR 340
              +
Sbjct: 458 TCTQ 461


>gi|239926647|ref|ZP_04683600.1| hypothetical protein SghaA1_00330 [Streptomyces ghanaensis ATCC
           14672]
          Length = 1101

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 73/208 (35%), Gaps = 16/208 (7%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D +    +      A +R+ +       P F   G R      +    D+ +VDL + A 
Sbjct: 78  DAVNALWLVPPSGGAARRLTDDAEDATWPSFFPGGARVAFQSFRRGTYDLCAVDLATGAV 137

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPV 353
           ERLT     ++  + SPD  +I + S+ +G   L  +       + ++   +  SY  P 
Sbjct: 138 ERLTRGTQYDVEPAVSPDGRRIAYVSEDDGTSVLRCLDLATGRTRTLAGTGDGRSYRSPT 197

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           W P G  +A+     E   + +        R             +P+G+ +  +    G 
Sbjct: 198 WHPGGRSLAYVVGETEVETLHLAD----GRRTPTYT--------APAGQVVRGTSYSPGG 245

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQ 441
               L  + ++G    L       S P 
Sbjct: 246 ---ALAHVLVDGPRARLYVEGRPVSAPA 270



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 91/271 (33%), Gaps = 38/271 (14%)

Query: 153 KIAHTISDDIYQSIT---GEKGDFNSRILFVSE-SVVSGIIKNSLCVMDRDGANIRYLTP 208
           ++ H  +D + +  T       D ++ I F +  S       N   V+  D A +R +  
Sbjct: 285 ELVHGGADGLLRRRTTTGPATPDASTVIPFTALLSAPGTRPVNRRPVVLPDSAPVRGI-- 342

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                   P  SP+   V +            L         +R+ +       P +  +
Sbjct: 343 ------AGPVLSPDASAVCFRALGA-------LWLLPFGGTARRLTD-DGDCRDPHWFPD 388

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+  + S  +     ++   L     E+LT+     +  S SP   QI F+ D  G   L
Sbjct: 389 GRAIVHSSDRTGVPQLWRHPLDGGPPEQLTDRPGGALLPSVSPSGRQIAFQ-DEAGA--L 445

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--------KFSGEKFAIGVMKKDG 380
           +V+  +    + +   ++ +     WSP G  ++          + +G    + V    G
Sbjct: 446 HVLDLDDGTSREVLPVQDHA-GKASWSPDGTRLSLAVLVPASERETAGLNRVLTVETATG 504

Query: 381 SQERLLVEDSN------LQAPTWSPSGRSLI 405
                 +             P W+P G SL+
Sbjct: 505 RTTVQAIAPGRSVGTRGDDGPVWAPDGTSLL 535



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 92/321 (28%), Gaps = 55/321 (17%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            A  ++DD   +         +R+ F S    +      LC +D     +  LT    Q 
Sbjct: 92  AARRLTDDAEDATWPSFFPGGARVAFQSFRRGT----YDLCAVDLATGAVERLTRGT-QY 146

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRA 272
             EP  SP+ +++AY + DD     +  +D    R     G        +P +   G+  
Sbjct: 147 DVEPAVSPDGRRIAYVSEDDG-TSVLRCLDLATGRTRTLAGTGDGRSYRSPTWHPGGRSL 205

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDS----------SQIVFESD 321
              V + E   ++  D     T   T      +   SYSP               ++   
Sbjct: 206 AYVVGETEVETLHLAD--GRRTPTYTAPAGQVVRGTSYSPGGALAHVLVDGPRARLYVEG 263

Query: 322 RE----------------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           R                    +L    ++G  ++R +          V        A   
Sbjct: 264 RPVSAPAEEPGPFPVAWLSATELVHGGADGLLRRRTTTGPATPDASTVIP----FTALLS 319

Query: 366 FSGEKFAIG--VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             G +      V+  D +  R       +  P  SP   ++ F           L+ +  
Sbjct: 320 APGTRPVNRRPVVLPDSAPVR------GIAGPVLSPDASAVCF------RALGALWLLPF 367

Query: 424 NGRNETLINTPAYASDPQWVG 444
            G     +       DP W  
Sbjct: 368 -GGTARRLTDDGDCRDPHWFP 387


>gi|108757114|ref|YP_634720.1| S9C family peptidase [Myxococcus xanthus DK 1622]
 gi|108460994|gb|ABF86179.1| peptidase, S9C (acylaminoacyl-peptidase) subfamily [Myxococcus
           xanthus DK 1622]
          Length = 730

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 90/257 (35%), Gaps = 72/257 (28%)

Query: 261 LAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDS 313
            +PR S +GK+    ++           D++ V +  NA   +LT+    +   +++PD 
Sbjct: 87  SSPRVSPDGKQVAYVLRTTDMEANRGRTDLWLVGVDGNAAPRQLTSHPDADSEPTWAPDG 146

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---------- 363
             + F S R G  Q++ +  +G +  ++++           SP G  +A           
Sbjct: 147 KSLFFLSSRGGSSQVWRLPVDGGEAVQVTKL-PLDVGAFRVSPDGTRLAVALEVFPDCPT 205

Query: 364 ------------------------------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                                         T   G +  + V+   G     +++  +  
Sbjct: 206 LECTPQREEERSKRKATGRTYDKLFARHWDTWKDGRRSHVFVVPVAGGAPVDVMKGMDAD 265

Query: 394 APT----------WSPSGRSLIFSRKKDGD-----TGSKLYSIDLNG---------RNET 429
           +P+          ++P  +S++F+ +  G      T   L+   ++G         +N  
Sbjct: 266 SPSKPFGGAEEFTFTPDNKSIVFAARDVGRSEAWSTDLDLFVAPIDGKAKPRKLTEKNRA 325

Query: 430 LINTPAYASDPQWVGFM 446
              +P ++ D + + ++
Sbjct: 326 TDTSPVFSPDGKTLAYL 342



 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 124/361 (34%), Gaps = 70/361 (19%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIR 204
           +PA  +   H     + +  +        ++ +V  +    +   +  L ++  DG    
Sbjct: 68  APARPQPFTHHDMISLRRLSSPRVSPDGKQVAYVLRTTDMEANRGRTDLWLVGVDGNAAP 127

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
               S      EP ++P+ + + + +       +V+ +      A + +      + A R
Sbjct: 128 RQLTSHPDADSEPTWAPDGKSLFFLS-SRGGSSQVWRLPVDGGEAVQ-VTKLPLDVGAFR 185

Query: 265 FSSNGKRALISVQ---------------------------------------KDEAM-DI 284
            S +G R  ++++                                       KD     +
Sbjct: 186 VSPDGTRLAVALEVFPDCPTLECTPQREEERSKRKATGRTYDKLFARHWDTWKDGRRSHV 245

Query: 285 YSVDLQSNATERLTNTLFINI---------SASYSPDSSQIVFESDREGKEQLYVMQSN- 334
           + V +   A   +   +  +            +++PD+  IVF +   G+ + +    + 
Sbjct: 246 FVVPVAGGAPVDVMKGMDADSPSKPFGGAEEFTFTPDNKSIVFAARDVGRSEAWSTDLDL 305

Query: 335 -------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-----DGSQ 382
                   +  +++++   A+   PV+SP G  +A+   S   F     +       G Q
Sbjct: 306 FVAPIDGKAKPRKLTEKNRATDTSPVFSPDGKTLAYLAMSRPGFEADRYRVILRTWPGGQ 365

Query: 383 ERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           ER+L +D +  + +  WS  G++L  S    G     ++++D+     T +     A  P
Sbjct: 366 ERVLTQDWDRSVGSLAWSADGKTLFASAGHVGQQP--IFALDVATGKPTQLTKDGAADAP 423

Query: 441 Q 441
           Q
Sbjct: 424 Q 424



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 79/229 (34%), Gaps = 20/229 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +   ++   +            +     D   K  G          F+ + K  + + +
Sbjct: 236 TWKDGRRSHVFVVPVAGGAPVDVMKGMDADSPSKPFGGAEEFT----FTPDNKSIVFAAR 291

Query: 278 KDEA-------MDIYSVDLQSN-ATERLT-NTLFINISASYSPDSSQIVFES-DREG--- 324
                      +D++   +       +LT      + S  +SPD   + + +  R G   
Sbjct: 292 DVGRSEAWSTDLDLFVAPIDGKAKPRKLTEKNRATDTSPVFSPDGKTLAYLAMSRPGFEA 351

Query: 325 -KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            + ++ +    G  ++ ++QD + S     WS  G  +  +     +  I  +     + 
Sbjct: 352 DRYRVILRTWPGGQERVLTQDWDRSVGSLAWSADGKTLFASAGHVGQQPIFALDVATGKP 411

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             L +D    AP  +  GR +++    D D+ + L+ ++++G     + 
Sbjct: 412 TQLTKDGAADAPQPAAGGR-IVYVYD-DLDSPADLHVMNVDGSESRQLT 458



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 82/240 (34%), Gaps = 25/240 (10%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD--------QILFEPRFSPN 222
           G    ++            ++ + V+   G     +    D            E  F+P+
Sbjct: 223 GRTYDKLFARHWDTWKDGRRSHVFVVPVAGGAPVDVMKGMDADSPSKPFGGAEEFTFTPD 282

Query: 223 QQKVAYATYDDEDI------LRVYLMDTRIDRAPKRIGN-FRSMILAPRFSSNGKRALI- 274
            + + +A  D          L +++        P+++    R+   +P FS +GK     
Sbjct: 283 NKSIVFAARDVGRSEAWSTDLDLFVAPIDGKAKPRKLTEKNRATDTSPVFSPDGKTLAYL 342

Query: 275 SVQKDE-AMDIYSVDLQ---SNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLY 329
           ++ +     D Y V L+         LT     ++ S ++S D   +   +   G++ ++
Sbjct: 343 AMSRPGFEADRYRVILRTWPGGQERVLTQDWDRSVGSLAWSADGKTLFASAGHVGQQPIF 402

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVE 388
            +        ++++D  A    P     G  I +          + VM  DGS+ R L  
Sbjct: 403 ALDVATGKPTQLTKDGAADAPQPAA---GGRIVYVYDDLDSPADLHVMNVDGSESRQLTH 459


>gi|167762900|ref|ZP_02435027.1| hypothetical protein BACSTE_01264 [Bacteroides stercoris ATCC
           43183]
 gi|167699240|gb|EDS15819.1| hypothetical protein BACSTE_01264 [Bacteroides stercoris ATCC
           43183]
          Length = 705

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 55/305 (18%), Positives = 108/305 (35%), Gaps = 71/305 (23%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV      N L VM+ DG++ R +T    Q   +P +  + +K+A+   +     +V+ 
Sbjct: 73  YSVPENKSNNELFVMNADGSSNRQITRDSWQ-ESQPVWIKDGKKIAFLCNESGSS-QVWE 130

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------------------------ 277
           M+       K++  +   I    FS +GK+ L   Q                        
Sbjct: 131 MNPD-GTERKQLTRYEGDIEGFAFSPDGKKLLFIAQVKTVQSTADKHPDLPKATGIIVTD 189

Query: 278 ---------KDEAMDIYSVDLQSNATERLTNTLFI-NISA--------------SYSPDS 313
                       A   +  D   N    ++N   I +                 ++SP S
Sbjct: 190 LMYKHWDEWVTTAPHPFVADFDGNG---ISNVQDILDGEPYESPMKPWGGIEQLAWSPAS 246

Query: 314 SQIVFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            ++ +                 +Y+        + I+++ +    +P +SP G  IA+  
Sbjct: 247 DKVAYTCRKKTGLAYAVSTNSDIYIYDLATGKTENITEENKGYDTNPQYSPDGKYIAWQS 306

Query: 366 FSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              + +      + VM     ++R +    +SN+ A  W+   +S+ F     G+T  ++
Sbjct: 307 MERDGYEADLNRLFVMNLATGEKRFVSHAFESNVDAFLWNKDSQSIYFIGVWHGET--QI 364

Query: 419 YSIDL 423
           Y+IDL
Sbjct: 365 YNIDL 369



 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 86/247 (34%), Gaps = 61/247 (24%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I +   S + K+   SV      +     +++ ++   ++  ++T   +      +  
Sbjct: 52  GRIGSVAVSPDEKQIAYSVAYYSVPENKSNNELFVMNADGSSNRQITRDSWQESQPVWIK 111

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D  +I F  +  G  Q++ M  +G+++K++++  E       +SP G  + F        
Sbjct: 112 DGKKIAFLCNESGSSQVWEMNPDGTERKQLTRY-EGDIEGFAFSPDGKKLLFIAQVKTVQ 170

Query: 372 ---------------------------------AIGVMKKDG---SQERLLVEDSNLQAP 395
                                               V   DG   S  + +++    ++P
Sbjct: 171 STADKHPDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNVQDILDGEPYESP 230

Query: 396 ----------TWSPSGRSLIFS-RKKDG-----DTGSKLYSIDL-NGRNETLINTP-AYA 437
                      WSP+   + ++ RKK G      T S +Y  DL  G+ E +      Y 
Sbjct: 231 MKPWGGIEQLAWSPASDKVAYTCRKKTGLAYAVSTNSDIYIYDLATGKTENITEENKGYD 290

Query: 438 SDPQWVG 444
           ++PQ+  
Sbjct: 291 TNPQYSP 297



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/276 (11%), Positives = 88/276 (31%), Gaps = 61/276 (22%)

Query: 218 RFSPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+++++AY     +  +        +      + ++I         P +  +GK+  
Sbjct: 58  AVSPDEKQIAYSVAYYSVPENKSNNELFVMNADGSSNRQITRDSWQESQPVWIKDGKKIA 117

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------------ 321
               +  +  ++ ++      ++LT         ++SPD  +++F +             
Sbjct: 118 FLCNESGSSQVWEMNPDGTERKQLTRYEGDIEGFAFSPDGKKLLFIAQVKTVQSTADKHP 177

Query: 322 ---------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDP-------- 352
                                       +V   +G+    +    +   ++         
Sbjct: 178 DLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNVQDILDGEPYESPMKPWGGI 237

Query: 353 ---VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSP 399
               WSP  D +A+T                I +      +   + E+       P +SP
Sbjct: 238 EQLAWSPASDKVAYTCRKKTGLAYAVSTNSDIYIYDLATGKTENITEENKGYDTNPQYSP 297

Query: 400 SGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLIN 432
            G+ + + S ++DG     ++L+ ++L    +  ++
Sbjct: 298 DGKYIAWQSMERDGYEADLNRLFVMNLATGEKRFVS 333



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 101/295 (34%), Gaps = 61/295 (20%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------DD 233
           +    + +  M+ DG   + LT     I     FSP+ +K+ +               D 
Sbjct: 121 NESGSSQVWEMNPDGTERKQLTRYEGDIEGF-AFSPDGKKLLFIAQVKTVQSTADKHPDL 179

Query: 234 EDILRVYLMDTRIDRAPKRIG--------NFRSMILA----------------P------ 263
                + + D       + +         +F    ++                P      
Sbjct: 180 PKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNVQDILDGEPYESPMKPWGGIEQ 239

Query: 264 -RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLFINISASYSPDS 313
             +S    +   + +K            DIY  DL +  TE +T      + +  YSPD 
Sbjct: 240 LAWSPASDKVAYTCRKKTGLAYAVSTNSDIYIYDLATGKTENITEENKGYDTNPQYSPDG 299

Query: 314 SQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             I ++S +R+G      +L+VM     +++ +S   E++    +W+     I F     
Sbjct: 300 KYIAWQSMERDGYEADLNRLFVMNLATGEKRFVSHAFESNVDAFLWNKDSQSIYFIGVWH 359

Query: 369 EKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +  I  +   D      L +  +  A + +  G  LI +++     G ++Y+++
Sbjct: 360 GETQIYNIDLADNDSLNRLTDGMHDYA-SLALCGDKLI-AKRHSMSMGDEIYAVN 412


>gi|88706318|ref|ZP_01104024.1| secreted protein [Congregibacter litoralis KT71]
 gi|88699469|gb|EAQ96582.1| secreted protein [Congregibacter litoralis KT71]
          Length = 818

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 89/237 (37%), Gaps = 22/237 (9%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +P  SP+ + +A+A         ++L+D       +R+     +   PR+S++G+R    
Sbjct: 56  DPAPSPDGESIAFAAQG-----WLWLLDLDSG-IARRLTRGGDVDSRPRWSADGRRLAFV 109

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               +   +  +D+       + NT  I++   +S D   + + S + G   ++      
Sbjct: 110 RDTGKDTSLVVMDVAGGDET-IINTPAIDLDPEFSGDGESLYYASGQSGSIDIWRHHFAS 168

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQ-----ERLLVED 389
              +RI+  ++         P  D I +    G    + +     GS      E L    
Sbjct: 169 GHSERITALRQVERNVRRV-PGSDSILYLDGQGPSRQLRLRNFLTGSDISAHAETLTYHL 227

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN--GRNETLINTPAYASDPQWVG 444
           S    P      R ++FS  ++ D    L++ DL+  G  + L     YA  P +  
Sbjct: 228 SADVHPV----ERLVVFSAPREND--YHLWTKDLDHPGVRKQLTFGEGYALTPAFSA 278



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 94/246 (38%), Gaps = 7/246 (2%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L ++D D    R LT   D +   PR+S + +++A+     +D   V +     D   + 
Sbjct: 74  LWLLDLDSGIARRLTRGGD-VDSRPRWSADGRRLAFVRDTGKDTSLVVMDVAGGD---ET 129

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I N  ++ L P FS +G+    +  +  ++DI+     S  +ER+T    +  +    P 
Sbjct: 130 IINTPAIDLDPEFSGDGESLYYASGQSGSIDIWRHHFASGHSERITALRQVERNVRRVPG 189

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S  I++   +    QL +             +    +      P   L+ F+      + 
Sbjct: 190 SDSILYLDGQGPSRQLRLRNFLTGSDISAHAETLTYHLSADVHPVERLVVFSAPRENDYH 249

Query: 373 IGVMKKD--GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +     D  G +++L   +     P +S  G S+ F  + D     +L ++   G     
Sbjct: 250 LWTKDLDHPGVRKQLTFGEGYALTPAFSADGTSIYFV-EADAARQFQLKTVPTYGGKVET 308

Query: 431 INTPAY 436
           +   A+
Sbjct: 309 VKITAW 314



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 5/109 (4%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              + SPD   I F +       L+++  +    +R+++  +     P WS  G  +AF 
Sbjct: 55  TDPAPSPDGESIAFAAQ----GWLWLLDLDSGIARRLTRGGDV-DSRPRWSADGRRLAFV 109

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           + +G+  ++ VM   G  E ++   +    P +S  G SL ++  + G 
Sbjct: 110 RDTGKDTSLVVMDVAGGDETIINTPAIDLDPEFSGDGESLYYASGQSGS 158


>gi|94971144|ref|YP_593192.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553194|gb|ABF43118.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 888

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 107/298 (35%), Gaps = 24/298 (8%)

Query: 152 RKIAHTISDDIYQ--SITGEKGDFNSRILFVSESVVSGIIKNSLC---VMDRDGANIRYL 206
           R + HT S+ ++    +  E+        F   +        +L     +D         
Sbjct: 527 RFLVHTFSNALFANGYLIFERERTLLAQSFDPSTGKLSGEPKTLAETPQVDASLWRTNLS 586

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             +   +++    +   Q +A+           Y    ++  +   +G+F+ + L    S
Sbjct: 587 VSTNGMMIYASGAAAGGQSLAW-----------YDRSGKVLESLAGLGSFQEVQL----S 631

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            + K+  ++     A +I+  DL ++   RL  +  +     +SPD S+I F  ++    
Sbjct: 632 PDNKKLALTDVNTVAANIWVYDLTTHLKNRLMFSGGVTRGPVWSPDGSRIAFTMNQGASM 691

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +        +Q  ++    +      WSP G  + + +  G +  + ++   G  +   
Sbjct: 692 AIKPSAGGAPEQTILTVPDHSLSGVTTWSPDGRHLMYQQGYGLELQLSLLDPSGQGKPQA 751

Query: 387 VEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
              ++++  +  +SP GR + +    +      +      G    +  +  Y  +P+W
Sbjct: 752 FAGNDMRTMSGQFSPDGRWVAYMAFMNSQPQIFVAPFPWTGEKWQV--SQGYGIEPRW 807



 Score = 90.8 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 70/190 (36%), Gaps = 7/190 (3%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +K+A    D   +     +         R+     +   P +S +G R   ++ + 
Sbjct: 631 SPDNKKLALT--DVNTVAANIWVYDLTTHLKNRLMFSGGVTRGPVWSPDGSRIAFTMNQG 688

Query: 280 EAMDIYSVDLQSNATER--LT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
               +        A E+  LT     ++   ++SPD   ++++     + QL ++  +G 
Sbjct: 689 --ASMAIKPSAGGAPEQTILTVPDHSLSGVTTWSPDGRHLMYQQGYGLELQLSLLDPSGQ 746

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            + +     +       +SP G  +A+  F   +  I V     + E+  V       P 
Sbjct: 747 GKPQAFAGNDMRTMSGQFSPDGRWVAYMAFMNSQPQIFVAPFPWTGEKWQVSQGYGIEPR 806

Query: 397 WSPSGRSLIF 406
           W   G+ + +
Sbjct: 807 WRGDGKEIYY 816



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/270 (19%), Positives = 84/270 (31%), Gaps = 20/270 (7%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID---RAP 250
               +D          ++       FS       Y  ++ E  L     D         P
Sbjct: 508 APTSQDTGVFYASVDGKENRFLVHTFSNALFANGYLIFERERTLLAQSFDPSTGKLSGEP 567

Query: 251 KRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           K +     +  +        S+NG     S        +   D      E L   L    
Sbjct: 568 KTLAETPQVDASLWRTNLSVSTNGMMIYASGAAAGGQSLAWYDRSGKVLESL-AGLGSFQ 626

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               SPD+ ++           ++V       + R+          PVWSP G  IAFT 
Sbjct: 627 EVQLSPDNKKLALTDVNTVAANIWVYDLTTHLKNRLMFSG-GVTRGPVWSPDGSRIAFTM 685

Query: 366 FSGEKFAIGVMKKDGSQER-LLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             G   AI      G+ E+ +L   + S     TWSP GR L++ +    +    L    
Sbjct: 686 NQGASMAI-KPSAGGAPEQTILTVPDHSLSGVTTWSPDGRHLMYQQGYGLELQLSLLDPS 744

Query: 423 LNGRNET------LINTPAYASDPQWVGFM 446
             G+ +          +  ++ D +WV +M
Sbjct: 745 GQGKPQAFAGNDMRTMSGQFSPDGRWVAYM 774



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 84/243 (34%), Gaps = 35/243 (14%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                 I   P  SP+ +K+ ++        ++++ D     A    G        P +S
Sbjct: 352 FNISGDISGPPVISPDGRKLVFSARKSGQAAQLFVRDLESVTARPLPGTEDG--RFPFWS 409

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            + +             +  +D+ ++A   L     +    S+  D + +   S      
Sbjct: 410 PDSRSLGFFT----NDKLKRIDIDASAPVTL-CDSTLGRGGSWGADGNILAAISY---NT 461

Query: 327 QLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGD---LIAFTKFSGEKFAIGV--MKK 378
            + ++ ++G     +S+    K +S   P W P G     +A    +      GV     
Sbjct: 462 TIAMLPASGGAPHELSKLEGTKYSSNRWPTWLPDGKHYLYVAVNHSAPTSQDTGVFYASV 521

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK-------DGDTGSKLYSIDLNGRNETLI 431
           DG + R LV   +        +G  LIF R++       D  TG       L+G  +TL 
Sbjct: 522 DGKENRFLVHTFSNALFA---NG-YLIFERERTLLAQSFDPSTGK------LSGEPKTLA 571

Query: 432 NTP 434
            TP
Sbjct: 572 ETP 574



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 35/96 (36%), Gaps = 7/96 (7%)

Query: 350 FDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             PV SP G  + F+ + SG+   + V   +    R L    + + P WSP  RSL F  
Sbjct: 360 GPPVISPDGRKLVFSARKSGQAAQLFVRDLESVTARPLPGTEDGRFPFWSPDSRSLGFFT 419

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                   KL  ID++      +          W  
Sbjct: 420 N------DKLKRIDIDASAPVTLCDSTLGRGGSWGA 449


>gi|299146378|ref|ZP_07039446.1| protein TolB [Bacteroides sp. 3_1_23]
 gi|298516869|gb|EFI40750.1| protein TolB [Bacteroides sp. 3_1_23]
          Length = 327

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 89/256 (34%), Gaps = 55/256 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S +   +AY +Y + +   +++ +     +  +  N    +L   +S +GK    S  +
Sbjct: 72  ISVDGNNIAYLSYRN-NTTNIFIKELSKQGSSIQRTNRTG-VLDFSYSPDGKYLCFSETR 129

Query: 279 DEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDR--------------- 322
                I+  +  S     ++TN    + S  YS D   I F                   
Sbjct: 130 GNTNQIFQTNANSGYVCRQITNGN-QDYSPIYSSDMKLIFFARQEMKGISIWSYNIQNNF 188

Query: 323 --------------------------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                                      GK +++ +      ++ I  D + S+  P  SP
Sbjct: 189 LSNYSNGMNPCPINKESAFLCTRISGTGKSEIWKINYKTGVEECIVSDPQHSFTTPTLSP 248

Query: 357 QGDLIAFT---KFSGEKF-----AIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFS 407
            G  I F    K     F      I V K DG++  ++    ++  +P WS  G+ + F 
Sbjct: 249 DGQWILFVGDSKIDDNNFSYLNTDIFVCKVDGTRLSQITYHAADDLSPVWSKDGKYIYFI 308

Query: 408 RKKDGDTG-SKLYSID 422
            ++   TG + ++ ++
Sbjct: 309 SQRGDPTGTTNIWRMN 324



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 48/147 (32%), Gaps = 15/147 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAY--ATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            NI+    S       P   P  ++ A+            ++ ++ +       + + + 
Sbjct: 182 YNIQNNFLSNYSNGMNPC--PINKESAFLCTRISGTGKSEIWKINYKTGVEECIVSDPQH 239

Query: 259 MILAPRFSSNGKRALISVQK--DEA------MDIYSVDLQSNATERLTNTLFINISASYS 310
               P  S +G+  L       D+        DI+   +      ++T     ++S  +S
Sbjct: 240 SFTTPTLSPDGQWILFVGDSKIDDNNFSYLNTDIFVCKVDGTRLSQITYHAADDLSPVWS 299

Query: 311 PDSSQIVFESDRE---GKEQLYVMQSN 334
            D   I F S R    G   ++ M  +
Sbjct: 300 KDGKYIYFISQRGDPTGTTNIWRMNFS 326


>gi|291434963|ref|ZP_06574353.1| amidohydrolase [Streptomyces ghanaensis ATCC 14672]
 gi|291337858|gb|EFE64814.1| amidohydrolase [Streptomyces ghanaensis ATCC 14672]
          Length = 1084

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 73/208 (35%), Gaps = 16/208 (7%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D +    +      A +R+ +       P F   G R      +    D+ +VDL + A 
Sbjct: 61  DAVNALWLVPPSGGAARRLTDDAEDATWPSFFPGGARVAFQSFRRGTYDLCAVDLATGAV 120

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPV 353
           ERLT     ++  + SPD  +I + S+ +G   L  +       + ++   +  SY  P 
Sbjct: 121 ERLTRGTQYDVEPAVSPDGRRIAYVSEDDGTSVLRCLDLATGRTRTLAGTGDGRSYRSPT 180

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           W P G  +A+     E   + +        R             +P+G+ +  +    G 
Sbjct: 181 WHPGGRSLAYVVGETEVETLHLAD----GRRTPTYT--------APAGQVVRGTSYSPGG 228

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQ 441
               L  + ++G    L       S P 
Sbjct: 229 ---ALAHVLVDGPRARLYVEGRPVSAPA 253



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 91/271 (33%), Gaps = 38/271 (14%)

Query: 153 KIAHTISDDIYQSIT---GEKGDFNSRILFVSE-SVVSGIIKNSLCVMDRDGANIRYLTP 208
           ++ H  +D + +  T       D ++ I F +  S       N   V+  D A +R +  
Sbjct: 268 ELVHGGADGLLRRRTTTGPATPDASTVIPFTALLSAPGTRPVNRRPVVLPDSAPVRGI-- 325

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                   P  SP+   V +            L         +R+ +       P +  +
Sbjct: 326 ------AGPVLSPDASAVCFRALGA-------LWLLPFGGTARRLTD-DGDCRDPHWFPD 371

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+  + S  +     ++   L     E+LT+     +  S SP   QI F+ D  G   L
Sbjct: 372 GRAIVHSSDRTGVPQLWRHPLDGGPPEQLTDRPGGALLPSVSPSGRQIAFQ-DEAGA--L 428

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--------KFSGEKFAIGVMKKDG 380
           +V+  +    + +   ++ +     WSP G  ++          + +G    + V    G
Sbjct: 429 HVLDLDDGTSREVLPVQDHA-GKASWSPDGTRLSLAVLVPASERETAGLNRVLTVETATG 487

Query: 381 SQERLLVEDSN------LQAPTWSPSGRSLI 405
                 +             P W+P G SL+
Sbjct: 488 RTTVQAIAPGRSVGTRGDDGPVWAPDGTSLL 518



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/321 (16%), Positives = 92/321 (28%), Gaps = 55/321 (17%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            A  ++DD   +         +R+ F S    +      LC +D     +  LT    Q 
Sbjct: 75  AARRLTDDAEDATWPSFFPGGARVAFQSFRRGT----YDLCAVDLATGAVERLTRGT-QY 129

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRA 272
             EP  SP+ +++AY + DD     +  +D    R     G        +P +   G+  
Sbjct: 130 DVEPAVSPDGRRIAYVSEDDG-TSVLRCLDLATGRTRTLAGTGDGRSYRSPTWHPGGRSL 188

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDS----------SQIVFESD 321
              V + E   ++  D     T   T      +   SYSP               ++   
Sbjct: 189 AYVVGETEVETLHLAD--GRRTPTYTAPAGQVVRGTSYSPGGALAHVLVDGPRARLYVEG 246

Query: 322 RE----------------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           R                    +L    ++G  ++R +          V        A   
Sbjct: 247 RPVSAPAEEPGPFPVAWLSATELVHGGADGLLRRRTTTGPATPDASTVIP----FTALLS 302

Query: 366 FSGEKFAIG--VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             G +      V+  D +  R       +  P  SP   ++ F           L+ +  
Sbjct: 303 APGTRPVNRRPVVLPDSAPVR------GIAGPVLSPDASAVCF------RALGALWLLPF 350

Query: 424 NGRNETLINTPAYASDPQWVG 444
            G     +       DP W  
Sbjct: 351 -GGTARRLTDDGDCRDPHWFP 370


>gi|154936828|emb|CAL30199.1| NWD2 [Podospora anserina]
          Length = 1118

 Score =  102 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 97/269 (36%), Gaps = 26/269 (9%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + + +  + +         ++   FSP+ + +A  + D      + + +  
Sbjct: 756  SGSDDRTIKIWNLETGSCQQTLEGHSDSVWSVVFSPDSKWIASGSDDH----TIKIWNLE 811

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                 + +      + +  FS + K    S   D  + I+  +L++ + ++ L       
Sbjct: 812  TGSCQQTLEGHSDSVWSVVFSPDSKWIA-SGSDDRTIKIW--NLETGSCQQTLEGHSDSV 868

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S  +SPDS  I   S   G   + +        ++  +    S    V+SP    IA  
Sbjct: 869  RSVVFSPDSKWIASGS---GDRTIKIWNLETGSCQQTLEGHSDSVRSVVFSPDSKWIA-- 923

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSI 421
                +   I +   +    +  +E  +    +   +SP  + +        D   K++++
Sbjct: 924  -SGSDDRTIKIWNLETGSCQQTLEGHSDSVWSVVFFSPDSKWIASGSD---DHTIKIWNL 979

Query: 422  DLNGRNETL------INTPAYASDPQWVG 444
            +     +TL      + +  ++ D +W+ 
Sbjct: 980  ETGSCQQTLEGHSDSVRSVVFSPDSKWIA 1008



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 97/268 (36%), Gaps = 25/268 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + + +  + +         +    FSP+ + +A  + D      + + +  
Sbjct: 630 SGSDDRTIKIWNLETGSCQQTLEGHSSSVGSVVFSPDSKWIASGSGD----CTIKIWNLE 685

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                + +      + +  FS + K    S   D  + I+  +L++ + ++ L       
Sbjct: 686 TGSCQQTLEGHSGWVWSVVFSPDSKWIA-SGSGDRTIKIW--NLETGSCQQTLEGHSDSV 742

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  +SPDS  I   SD      + +        ++  +    S +  V+SP    IA  
Sbjct: 743 RSVVFSPDSKWIASGSD---DRTIKIWNLETGSCQQTLEGHSDSVWSVVFSPDSKWIA-- 797

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +   I +   +    +  +E  +    +  +SP  + +        D   K+++++
Sbjct: 798 -SGSDDHTIKIWNLETGSCQQTLEGHSDSVWSVVFSPDSKWIASGSD---DRTIKIWNLE 853

Query: 423 LNGRNETL------INTPAYASDPQWVG 444
                +TL      + +  ++ D +W+ 
Sbjct: 854 TGSCQQTLEGHSDSVRSVVFSPDSKWIA 881



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 93/260 (35%), Gaps = 31/260 (11%)

Query: 204 RYLTPSRDQILFEP--------RFSPNQQ--KVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           R++  S+  I   P         FSP +   +  +   + + I    ++    +   + +
Sbjct: 550 RFILNSQSIIDIAPLQIYASALVFSPARSITRGIFKQEERKWITSGPIVQDSWNACRQTL 609

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPD 312
                 + +  FS + K    S   D  + I+  +L++ + ++ L        S  +SPD
Sbjct: 610 EGHSDSVRSVVFSPDSKWIA-SGSDDRTIKIW--NLETGSCQQTLEGHSSSVGSVVFSPD 666

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S  I   S   G   + +        ++  +      +  V+SP    IA          
Sbjct: 667 SKWIASGS---GDCTIKIWNLETGSCQQTLEGHSGWVWSVVFSPDSKWIA---SGSGDRT 720

Query: 373 IGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           I +   +    +  +E  +   ++  +SP  + +        D   K+++++     +TL
Sbjct: 721 IKIWNLETGSCQQTLEGHSDSVRSVVFSPDSKWIASGSD---DRTIKIWNLETGSCQQTL 777

Query: 431 ------INTPAYASDPQWVG 444
                 + +  ++ D +W+ 
Sbjct: 778 EGHSDSVWSVVFSPDSKWIA 797


>gi|237712301|ref|ZP_04542782.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229453622|gb|EEO59343.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 1086

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/304 (17%), Positives = 116/304 (38%), Gaps = 38/304 (12%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  +  ++ EKG FN     + +  + G     +   +     +R+L+ + +  L    +
Sbjct: 228 DKSFYYLSEEKGSFN-----IFKRDIDGNTSKQI--TNHTKHPVRFLSAASNGTLC---Y 277

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
             + +            +++ ++  + D+   R    RS       S + K     ++ D
Sbjct: 278 GYDGEIYTVKEGAIPQKVQISIVTDKNDKDLIRQIK-RSGATEISLSPDAKEIAFVLRGD 336

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               +Y    + + T+++TNT        +SPD   IV+ S+R G  Q+Y       ++K
Sbjct: 337 ----VYVTSTEYSTTKQITNTPQQERDIHFSPDGRSIVYASERNGLWQIYQTSLAKKEEK 392

Query: 340 RISQ----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           + +           + + + F P +SP G  +AF +       I V+       R +++ 
Sbjct: 393 QFAYATNIKEERLTNSDITSFQPQYSPDGKEVAFLENRTT---IRVLNLKSKAVRTVMDG 449

Query: 390 SNLQAPT-------WSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASD 439
           +   + +       WSP  + ++ +    G   +K   L +   NG    L  +     +
Sbjct: 450 NYEYSYSDGDQWYQWSPDSKWILTNYIGIGGWNNKDVALVNASGNGEIHNLTESGYSDGN 509

Query: 440 PQWV 443
            +WV
Sbjct: 510 AKWV 513



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 84/240 (35%), Gaps = 37/240 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V            +I    +    P +S +GK+   +  
Sbjct: 30  AISPDGTTIAFTY--KGDIYTV----PSTGGRASQITTNPAHDTKPIWSPDGKKIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------REGK-E 326
           +  +MDI+ V+ +    +RLT         +Y  D+  I+F ++            G+ +
Sbjct: 84  RMGSMDIFEVNKEGGIPKRLTTHSGNETPVAY-KDAGHILFLANIMPTVEDAQFPSGQFQ 142

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIG 374
           Q+Y + + G      S        D   +  G+ + +               S     I 
Sbjct: 143 QVYEVNTEGGRPALFSSMP---MEDISINHTGNTLLYHDKKGYEDPWRKHHTSSITRDIW 199

Query: 375 VMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +   +G++   +    +   + P W+   +S  +  ++ G     ++  D++G     I 
Sbjct: 200 LCSLNGNRTFRKQTTFNGEDRTPVWASDDKSFYYLSEEKGSF--NIFKRDIDGNTSKQIT 257



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 65/202 (32%), Gaps = 30/202 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    IY+V        ++T     +    +SPD  +I F SDR 
Sbjct: 30  AISPDGTTIAFTYKGD----IYTVPSTGGRASQITTNPAHDTKPIWSPDGKKIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF-A 372
           G   ++ +   G   KR++         PV       I F           +F   +F  
Sbjct: 86  GSMDIFEVNKEGGIPKRLTTHSGNE--TPVAYKDAGHILFLANIMPTVEDAQFPSGQFQQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF----------SRKKDGDTGSKLYSID 422
           +  +  +G +   L     ++  + + +G +L++           +         ++   
Sbjct: 144 VYEVNTEGGRP-ALFSSMPMEDISINHTGNTLLYHDKKGYEDPWRKHHTSSITRDIWLCS 202

Query: 423 LNG--RNETLINTPAYASDPQW 442
           LNG                P W
Sbjct: 203 LNGNRTFRKQTTFNGEDRTPVW 224



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 85/231 (36%), Gaps = 21/231 (9%)

Query: 222 NQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              +  +  +    I R ++L     +R  ++   F      P ++S+ K      ++  
Sbjct: 180 KGYEDPWRKHHTSSITRDIWLCSLNGNRTFRKQTTFNGEDRTPVWASDDKSFYYLSEEKG 239

Query: 281 AMDIYSVDLQSNATERLTNT---------LFINISASYSPDSSQIVFESDREGKEQLYVM 331
           + +I+  D+  N ++++TN             N +  Y  D    ++        Q   +
Sbjct: 240 SFNIFKRDIDGNTSKQITNHTKHPVRFLSAASNGTLCYGYDGE--IYTVKEGAIPQKVQI 297

Query: 332 Q--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              ++ +D+  I Q K +   +   SP    IAF         + V   + S  + +   
Sbjct: 298 SIVTDKNDKDLIRQIKRSGATEISLSPDAKEIAFVLRGD----VYVTSTEYSTTKQITNT 353

Query: 390 SNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
              +    +SP GRS++++ +++G    ++Y   L  + E          +
Sbjct: 354 PQQERDIHFSPDGRSIVYASERNGLW--QIYQTSLAKKEEKQFAYATNIKE 402



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSG 401
           QD          SP G  IAFT        I  +   G +  ++    ++   P WSP G
Sbjct: 20  QDNPLWMRYCAISPDGTTIAFTYKGD----IYTVPSTGGRASQITTNPAHDTKPIWSPDG 75

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + + F+  + G     ++ ++  G     + T +    P
Sbjct: 76  KKIAFASDRMGSM--DIFEVNKEGGIPKRLTTHSGNETP 112



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 77/234 (32%), Gaps = 29/234 (12%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    + ++   K  +  +   G     +T +      +P +SP+ +K+A+A+      +
Sbjct: 31  ISPDGTTIAFTYKGDIYTVPSTGGRASQITTNPAH-DTKPIWSPDGKKIAFASDRMGS-M 88

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----------VQKDEAMDIYSV 287
            ++ ++ +    PKR+           +   G    ++              +   +Y V
Sbjct: 89  DIFEVN-KEGGIPKRLTTHSGNETPVAYKDAGHILFLANIMPTVEDAQFPSGQFQQVYEV 147

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSN 334
           + +       ++    +IS   +   + +++  D++G                +++   N
Sbjct: 148 NTEGGRPALFSSMPMEDIS--INHTGNTLLYH-DKKGYEDPWRKHHTSSITRDIWLCSLN 204

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           G+   R           PVW+       +       F I     DG+  + +  
Sbjct: 205 GNRTFRKQTTFNGEDRTPVWASDDKSFYYLSEEKGSFNIFKRDIDGNTSKQITN 258



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F+P++SP+ ++VA+        +L +     R         ++       ++
Sbjct: 405 LTNSDITSFQPQYSPDGKEVAFLENRTTIRVLNLKSKAVRTVMDGNYEYSYSDGDQWYQW 464

Query: 266 SSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K  L +          D+  V+         LT + + + +A +  D   +++ESD
Sbjct: 465 SPDSKWILTNYIGIGGWNNKDVALVNASGNGEIHNLTESGYSDGNAKWVLDGKAMIWESD 524

Query: 322 REG 324
           R G
Sbjct: 525 RAG 527



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 13/64 (20%)

Query: 388 EDSNLQAPTW------SPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASDP 440
                  P W      SP G ++ F+ K        +Y++    GR   +   PA+ + P
Sbjct: 16  STYAQDNPLWMRYCAISPDGTTIAFTYK------GDIYTVPSTGGRASQITTNPAHDTKP 69

Query: 441 QWVG 444
            W  
Sbjct: 70  IWSP 73


>gi|265752010|ref|ZP_06087803.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263236802|gb|EEZ22272.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 1086

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/304 (17%), Positives = 116/304 (38%), Gaps = 38/304 (12%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  +  ++ EKG FN     + +  + G     +   +     +R+L+ + +  L    +
Sbjct: 228 DKSFYYLSEEKGSFN-----IFKRDIDGNTSKQI--TNHTKHPVRFLSAASNGTLC---Y 277

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
             + +            +++ ++  + D+   R    RS       S + K     ++ D
Sbjct: 278 GYDGEIYTVKEGAIPQKVQISIVTDKNDKDLIRQIK-RSGATEISLSPDAKEIAFVLRGD 336

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               +Y    + + T+++TNT        +SPD   IV+ S+R G  Q+Y       ++K
Sbjct: 337 ----VYVTSTEYSTTKQITNTPQQERDIHFSPDGRSIVYASERNGLWQIYQTSLAKKEEK 392

Query: 340 RISQ----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           + +           + + + F P +SP G  +AF +       I V+       R +++ 
Sbjct: 393 QFAYATDIKEERLTNSDITSFQPQYSPDGKEVAFLENRTT---IRVLNLKSKAVRTVMDG 449

Query: 390 SNLQAPT-------WSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASD 439
           +   + +       WSP  + ++ +    G   +K   L +   NG    L  +     +
Sbjct: 450 NYEYSYSDGDQWYQWSPDSKWILTNYIGIGGWNNKDVALVNASGNGEIHNLTESGYSDGN 509

Query: 440 PQWV 443
            +WV
Sbjct: 510 AKWV 513



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 84/240 (35%), Gaps = 37/240 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V            +I    +    P +S +GK+   +  
Sbjct: 30  AISPDGTTIAFTY--KGDIYTV----PSTGGRASQITTNPAHDTKPIWSPDGKKIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------REGK-E 326
           +  +MDI+ V+ +    +RLT         +Y  D+  I+F ++            G+ +
Sbjct: 84  RMGSMDIFEVNKEGGIPKRLTTHSGNETPVAY-KDAGHILFLANIMPTVEDAQFPSGQFQ 142

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIG 374
           Q+Y + + G      S        D   +  G+ + +               S     I 
Sbjct: 143 QVYEVNTEGGRPALFSSMP---MEDISINHTGNTLLYHDKKGYEDPWRKHHTSSITRDIW 199

Query: 375 VMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +   +G++   +    +   + P W+   +S  +  ++ G     ++  D++G     I 
Sbjct: 200 LCSLNGNRTFRKQTTFNGEDRTPVWASDDKSFYYLSEEKGSF--NIFKRDIDGNTSKQIT 257



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 65/202 (32%), Gaps = 30/202 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    IY+V        ++T     +    +SPD  +I F SDR 
Sbjct: 30  AISPDGTTIAFTYKGD----IYTVPSTGGRASQITTNPAHDTKPIWSPDGKKIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF-A 372
           G   ++ +   G   KR++         PV       I F           +F   +F  
Sbjct: 86  GSMDIFEVNKEGGIPKRLTTHSGNE--TPVAYKDAGHILFLANIMPTVEDAQFPSGQFQQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF----------SRKKDGDTGSKLYSID 422
           +  +  +G +   L     ++  + + +G +L++           +         ++   
Sbjct: 144 VYEVNTEGGRP-ALFSSMPMEDISINHTGNTLLYHDKKGYEDPWRKHHTSSITRDIWLCS 202

Query: 423 LNG--RNETLINTPAYASDPQW 442
           LNG                P W
Sbjct: 203 LNGNRTFRKQTTFNGEDRTPVW 224



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 92/248 (37%), Gaps = 33/248 (13%)

Query: 222 NQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              +  +  +    I R ++L     +R  ++   F      P ++S+ K      ++  
Sbjct: 180 KGYEDPWRKHHTSSITRDIWLCSLNGNRTFRKQTTFNGEDRTPVWASDDKSFYYLSEEKG 239

Query: 281 AMDIYSVDLQSNATERLTNT---------LFINISASYSPDSSQIVFESDREGKEQLYVM 331
           + +I+  D+  N ++++TN             N +  Y  D    ++        Q   +
Sbjct: 240 SFNIFKRDIDGNTSKQITNHTKHPVRFLSAASNGTLCYGYDGE--IYTVKEGAIPQKVQI 297

Query: 332 Q--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              ++ +D+  I Q K +   +   SP    IAF         + V   + S  + +   
Sbjct: 298 SIVTDKNDKDLIRQIKRSGATEISLSPDAKEIAFVLRGD----VYVTSTEYSTTKQITNT 353

Query: 390 SNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL------------NGRNETLINTPAY 436
              +    +SP GRS++++ +++G    ++Y   L            + + E L N+   
Sbjct: 354 PQQERDIHFSPDGRSIVYASERNGLW--QIYQTSLAKKEEKQFAYATDIKEERLTNSDIT 411

Query: 437 ASDPQWVG 444
           +  PQ+  
Sbjct: 412 SFQPQYSP 419



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSG 401
           QD          SP G  IAFT        I  +   G +  ++    ++   P WSP G
Sbjct: 20  QDNPLWMRYCAISPDGTTIAFTYKGD----IYTVPSTGGRASQITTNPAHDTKPIWSPDG 75

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + + F+  + G     ++ ++  G     + T +    P
Sbjct: 76  KKIAFASDRMGSM--DIFEVNKEGGIPKRLTTHSGNETP 112



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 77/234 (32%), Gaps = 29/234 (12%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    + ++   K  +  +   G     +T +      +P +SP+ +K+A+A+      +
Sbjct: 31  ISPDGTTIAFTYKGDIYTVPSTGGRASQITTNPAH-DTKPIWSPDGKKIAFASDRMGS-M 88

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----------VQKDEAMDIYSV 287
            ++ ++ +    PKR+           +   G    ++              +   +Y V
Sbjct: 89  DIFEVN-KEGGIPKRLTTHSGNETPVAYKDAGHILFLANIMPTVEDAQFPSGQFQQVYEV 147

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSN 334
           + +       ++    +IS   +   + +++  D++G                +++   N
Sbjct: 148 NTEGGRPALFSSMPMEDIS--INHTGNTLLYH-DKKGYEDPWRKHHTSSITRDIWLCSLN 204

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           G+   R           PVW+       +       F I     DG+  + +  
Sbjct: 205 GNRTFRKQTTFNGEDRTPVWASDDKSFYYLSEEKGSFNIFKRDIDGNTSKQITN 258



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F+P++SP+ ++VA+        +L +     R         ++       ++
Sbjct: 405 LTNSDITSFQPQYSPDGKEVAFLENRTTIRVLNLKSKAVRTVMDGNYEYSYSDGDQWYQW 464

Query: 266 SSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K  L +          D+  V+         LT + + + +A +  D   +++ESD
Sbjct: 465 SPDSKWILTNYIGIGGWNNKDVALVNASGNGEIHNLTESGYSDGNAKWVLDGKAMIWESD 524

Query: 322 REG 324
           R G
Sbjct: 525 RAG 527



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 13/64 (20%)

Query: 388 EDSNLQAPTW------SPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASDP 440
                  P W      SP G ++ F+ K        +Y++    GR   +   PA+ + P
Sbjct: 16  STYAQDNPLWMRYCAISPDGTTIAFTYK------GDIYTVPSTGGRASQITTNPAHDTKP 69

Query: 441 QWVG 444
            W  
Sbjct: 70  IWSP 73


>gi|170727653|ref|YP_001761679.1| peptidase S41 [Shewanella woodyi ATCC 51908]
 gi|169813000|gb|ACA87584.1| peptidase S41 [Shewanella woodyi ATCC 51908]
          Length = 1097

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 117/307 (38%), Gaps = 36/307 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +Q    +   +++R+ F+S++  +         M  DG +I+  +  ++  +   R   +
Sbjct: 216 HQGSVRQPMLWDNRLYFISDADGNDNF----WSMALDGTDIKQSSDFKEWSVRGARL--D 269

Query: 223 QQKVAY----------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             K+ +           +  +   L + L+     R    + +      + + S  G + 
Sbjct: 270 NGKIVFQQGADIKLFDLSNHESRTLDIQLVSDFPHRRAHWVNSPMKYATSTQLSPEGNKV 329

Query: 273 LISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           +I+ +      +       +    L         SA  SPD S +   SD  G+++++  
Sbjct: 330 VITAR----SHVAIAGTDGSRLVELALPGNSRVRSAVMSPDGSWVYGISDASGEQEIWRF 385

Query: 332 QSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            ++GS   K++++D          SP G  IA   ++G+   + ++    ++ + ++   
Sbjct: 386 PADGSQGAKQLTKDGTTLRMGIKLSPDGRYIATDDYNGD---LWLLDLKRNRTKKIITQG 442

Query: 391 NLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYASD 439
               P     WS   + +  ++ + G    ++    L+      + +       PA++ D
Sbjct: 443 EGLGPYADVVWSGDSQYIAVTKFELGTPRPQVVLYSLDDDRSEALTSDKYESYAPAFSPD 502

Query: 440 PQWVGFM 446
            QW+ F+
Sbjct: 503 GQWLYFL 509



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 73/220 (33%), Gaps = 17/220 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +   S  +     + SP   KV            V +  T   R  +      S + +  
Sbjct: 308 HWVNSPMKYATSTQLSPEGNKVVITARSH-----VAIAGTDGSRLVELALPGNSRVRSAV 362

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLT-NTLFINISASYSPDSSQIVFESDR 322
            S +G             +I+      +   ++LT +   + +    SPD   I      
Sbjct: 363 MSPDGSWVYGISDASGEQEIWRFPADGSQGAKQLTKDGTTLRMGIKLSPDGRYIA---TD 419

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGE----KFAIGVM 376
           +    L+++    +  K+I    E    Y D VWS     IA TKF       +  +  +
Sbjct: 420 DYNGDLWLLDLKRNRTKKIITQGEGLGPYADVVWSGDSQYIAVTKFELGTPRPQVVLYSL 479

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             D S+  L  +     AP +SP G+ L F   +   +  
Sbjct: 480 DDDRSEA-LTSDKYESYAPAFSPDGQWLYFLSDRQFSSTP 518



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 71/200 (35%), Gaps = 22/200 (11%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                   AP  S N    + + + D    +++  +     +RLT+     + A+ S D 
Sbjct: 28  TALPGYYRAPALSEN--TLVFTAEGD----LWTKQMGEPQAQRLTSLPAQELGATISKDG 81

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             + + ++ EG  ++YV+   G   KR+S +  +      W+  G ++  T  +      
Sbjct: 82  KWVAYVANYEGTSEVYVIPIAGGQAKRVSFE-NSRVRVQGWTADGKVLYATDNAFGPANY 140

Query: 374 GV---MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-----------KDGDTGSKLY 419
            V   +  +  + + L     ++       G  L F+R              G    +L+
Sbjct: 141 WVLRTVNPETLEAQDLPLADAIEG-AIDDKGEYLYFTRFGLQTTGDNAKVYRGGAKGELW 199

Query: 420 SIDLNGRNETLINTPAYASD 439
              LN   E  + T A+   
Sbjct: 200 RYKLNSDQEAQLLTSAHQGS 219



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 69/197 (35%), Gaps = 22/197 (11%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +R+ +  +  L    S +GK        +   ++Y + +     +R++          ++
Sbjct: 63  QRLTSLPAQELGATISKDGKWVAYVANYEGTSEVYVIPIAGGQAKRVSFENSRVRVQGWT 122

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----- 365
            D   +    +  G    +V+++   +         A   +     +G+ + FT+     
Sbjct: 123 ADGKVLYATDNAFGPANYWVLRTVNPETLEAQDLPLADAIEGAIDDKGEYLYFTRFGLQT 182

Query: 366 --------FSGEKFAIGVMKKDGSQE-RLLV--EDSNLQAPT-WSPSGRSLIFSRKKDGD 413
                     G K  +   K +  QE +LL      +++ P  W    R L F    DG+
Sbjct: 183 TGDNAKVYRGGAKGELWRYKLNSDQEAQLLTSAHQGSVRQPMLW--DNR-LYFISDADGN 239

Query: 414 TGSKLYSIDLNGRNETL 430
                +S+ L+G +   
Sbjct: 240 DNF--WSMALDGTDIKQ 254



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 58/148 (39%), Gaps = 9/148 (6%)

Query: 181 SESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +     +  +     DG    + LT     +    + SP+ + +A   Y+      +
Sbjct: 370 VYGISDASGEQEIWRFPADGSQGAKQLTKDGTTLRMGIKLSPDGRYIATDDYNG----DL 425

Query: 240 YLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATE 295
           +L+D + +R  K I     +       +S + +   ++  +        V   L  + +E
Sbjct: 426 WLLDLKRNRTKKIITQGEGLGPYADVVWSGDSQYIAVTKFELGTPRPQVVLYSLDDDRSE 485

Query: 296 RLTNTLFINISASYSPDSSQIVFESDRE 323
            LT+  + + + ++SPD   + F SDR+
Sbjct: 486 ALTSDKYESYAPAFSPDGQWLYFLSDRQ 513



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 97/297 (32%), Gaps = 48/297 (16%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +    + + V+   G   + ++    ++  +  ++ +  KV YAT +       +++ 
Sbjct: 87  VANYEGTSEVYVIPIAGGQAKRVSFENSRVRVQ-GWTADG-KVLYATDNAFGPANYWVLR 144

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-------------VQKDEAMDIYSVDLQ 290
           T      +      +  +       G+    +              +     +++   L 
Sbjct: 145 TVNPETLEAQDLPLADAIEGAIDDKGEYLYFTRFGLQTTGDNAKVYRGGAKGELWRYKLN 204

Query: 291 SNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           S+   +L  +             +  ++ F SD +G +  + M  +G+D K+ S  KE S
Sbjct: 205 SDQEAQLLTSAHQGSVRQPMLWDN--RLYFISDADGNDNFWSMALDGTDIKQSSDFKEWS 262

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER----LLVEDSNLQAPTW------- 397
                       I F     +   I +      + R     LV D   +   W       
Sbjct: 263 VRGARL--DNGKIVF----QQGADIKLFDLSNHESRTLDIQLVSDFPHRRAHWVNSPMKY 316

Query: 398 ------SPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                 SP G  ++ + +      G  GS+L  + L G +   + +   + D  WV 
Sbjct: 317 ATSTQLSPEGNKVVITARSHVAIAGTDGSRLVELALPGNS--RVRSAVMSPDGSWVY 371



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 75/230 (32%), Gaps = 35/230 (15%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G        S          S + + VAY   + E    VY++     +A KR+    S 
Sbjct: 58  GEPQAQRLTSLPAQELGATISKDGKWVAYVA-NYEGTSEVYVIPIAGGQA-KRVSFENSR 115

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIY---SVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +    ++++GK    +       + +   +V+ ++   + L     I    +       +
Sbjct: 116 VRVQGWTADGKVLYATDNAFGPANYWVLRTVNPETLEAQDLPLADAI--EGAIDDKGEYL 173

Query: 317 VFES------------DREG-KEQLYVMQSNG-SDQKRISQDKEASYFDPV-WSPQGDLI 361
            F               R G K +L+  + N   + + ++   + S   P+ W    + +
Sbjct: 174 YFTRFGLQTTGDNAKVYRGGAKGELWRYKLNSDQEAQLLTSAHQGSVRQPMLW---DNRL 230

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP-----SGRSLIF 406
            F   +        M  DG+  +     S+ +   WS          ++F
Sbjct: 231 YFISDADGNDNFWSMALDGTDIKQ---SSDFKE--WSVRGARLDNGKIVF 275


>gi|212691269|ref|ZP_03299397.1| hypothetical protein BACDOR_00760 [Bacteroides dorei DSM 17855]
 gi|212666501|gb|EEB27073.1| hypothetical protein BACDOR_00760 [Bacteroides dorei DSM 17855]
          Length = 1086

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/304 (17%), Positives = 116/304 (38%), Gaps = 38/304 (12%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  +  ++ EKG FN     + +  + G     +   +     +R+L+ + +  L    +
Sbjct: 228 DKSFYYLSEEKGSFN-----IFKRDIDGNTSKQI--TNHTKHPVRFLSAASNGTLC---Y 277

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
             + +            +++ ++  + D+   R    RS       S + K     ++ D
Sbjct: 278 GYDGEIYTVKEGAIPQKVQISIVTDKNDKDLIRQIK-RSGATEISLSPDAKEIAFVLRGD 336

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               +Y    + + T+++TNT        +SPD   IV+ S+R G  Q+Y       ++K
Sbjct: 337 ----VYVTSTEYSTTKQITNTPQQERDIHFSPDGRSIVYASERNGLWQIYQTSLAKKEEK 392

Query: 340 RISQ----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           + +           + + + F P +SP G  +AF +       I V+       R +++ 
Sbjct: 393 QFAYATDIKEERLTNSDITSFQPQYSPDGKEVAFLENRTT---IRVLNLKSKAVRTVMDG 449

Query: 390 SNLQAPT-------WSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASD 439
           +   + +       WSP  + ++ +    G   +K   L +   NG    L  +     +
Sbjct: 450 NYEYSYSDGDQWYQWSPDSKWILTNYIGIGGWNNKDVALVNASGNGEIHNLTESGYSDGN 509

Query: 440 PQWV 443
            +WV
Sbjct: 510 AKWV 513



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 84/240 (35%), Gaps = 37/240 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V            +I    +    P +S +GK+   +  
Sbjct: 30  AISPDGTTIAFTY--KGDIYTV----PSTGGRASQITTNPAHDTKPIWSPDGKKIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------REGK-E 326
           +  +MDI+ V+ +    +RLT         +Y  D+  I+F ++            G+ +
Sbjct: 84  RMGSMDIFEVNKEGGIPKRLTTHSGNETPVAY-KDAGHILFLANIMPTVEDAQFPSGQFQ 142

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIG 374
           Q+Y + + G      S        D   +  G+ + +               S     I 
Sbjct: 143 QVYEVNTEGGRPALFSSMP---MEDISINHTGNTLLYHDKKGYEDPWRKHHTSSITRDIW 199

Query: 375 VMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +   +G++   +    +   + P W+   +S  +  ++ G     ++  D++G     I 
Sbjct: 200 LCSLNGNRTFRKQTTFNGEDRTPVWASDDKSFYYLSEEKGSF--NIFKRDIDGNTSKQIT 257



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 65/202 (32%), Gaps = 30/202 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    IY+V        ++T     +    +SPD  +I F SDR 
Sbjct: 30  AISPDGTTIAFTYKGD----IYTVPSTGGRASQITTNPAHDTKPIWSPDGKKIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF-A 372
           G   ++ +   G   KR++         PV       I F           +F   +F  
Sbjct: 86  GSMDIFEVNKEGGIPKRLTTHSGNE--TPVAYKDAGHILFLANIMPTVEDAQFPSGQFQQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF----------SRKKDGDTGSKLYSID 422
           +  +  +G +   L     ++  + + +G +L++           +         ++   
Sbjct: 144 VYEVNTEGGRP-ALFSSMPMEDISINHTGNTLLYHDKKGYEDPWRKHHTSSITRDIWLCS 202

Query: 423 LNG--RNETLINTPAYASDPQW 442
           LNG                P W
Sbjct: 203 LNGNRTFRKQTTFNGEDRTPVW 224



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 92/248 (37%), Gaps = 33/248 (13%)

Query: 222 NQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              +  +  +    I R ++L     +R  ++   F      P ++S+ K      ++  
Sbjct: 180 KGYEDPWRKHHTSSITRDIWLCSLNGNRTFRKQTTFNGEDRTPVWASDDKSFYYLSEEKG 239

Query: 281 AMDIYSVDLQSNATERLTNT---------LFINISASYSPDSSQIVFESDREGKEQLYVM 331
           + +I+  D+  N ++++TN             N +  Y  D    ++        Q   +
Sbjct: 240 SFNIFKRDIDGNTSKQITNHTKHPVRFLSAASNGTLCYGYDGE--IYTVKEGAIPQKVQI 297

Query: 332 Q--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              ++ +D+  I Q K +   +   SP    IAF         + V   + S  + +   
Sbjct: 298 SIVTDKNDKDLIRQIKRSGATEISLSPDAKEIAFVLRGD----VYVTSTEYSTTKQITNT 353

Query: 390 SNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL------------NGRNETLINTPAY 436
              +    +SP GRS++++ +++G    ++Y   L            + + E L N+   
Sbjct: 354 PQQERDIHFSPDGRSIVYASERNGLW--QIYQTSLAKKEEKQFAYATDIKEERLTNSDIT 411

Query: 437 ASDPQWVG 444
           +  PQ+  
Sbjct: 412 SFQPQYSP 419



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSG 401
           QD          SP G  IAFT        I  +   G +  ++    ++   P WSP G
Sbjct: 20  QDNPLWMRYCAISPDGTTIAFTYKGD----IYTVPSTGGRASQITTNPAHDTKPIWSPDG 75

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + + F+  + G     ++ ++  G     + T +    P
Sbjct: 76  KKIAFASDRMGSM--DIFEVNKEGGIPKRLTTHSGNETP 112



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 77/234 (32%), Gaps = 29/234 (12%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    + ++   K  +  +   G     +T +      +P +SP+ +K+A+A+      +
Sbjct: 31  ISPDGTTIAFTYKGDIYTVPSTGGRASQITTNPAH-DTKPIWSPDGKKIAFASDRMGS-M 88

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----------VQKDEAMDIYSV 287
            ++ ++ +    PKR+           +   G    ++              +   +Y V
Sbjct: 89  DIFEVN-KEGGIPKRLTTHSGNETPVAYKDAGHILFLANIMPTVEDAQFPSGQFQQVYEV 147

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSN 334
           + +       ++    +IS   +   + +++  D++G                +++   N
Sbjct: 148 NTEGGRPALFSSMPMEDIS--INHTGNTLLYH-DKKGYEDPWRKHHTSSITRDIWLCSLN 204

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           G+   R           PVW+       +       F I     DG+  + +  
Sbjct: 205 GNRTFRKQTTFNGEDRTPVWASDDKSFYYLSEEKGSFNIFKRDIDGNTSKQITN 258



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F+P++SP+ ++VA+        +L +     R         ++       ++
Sbjct: 405 LTNSDITSFQPQYSPDGKEVAFLENRTTIRVLNLKSKAVRTVMDGNYEYSYSDGDQWYQW 464

Query: 266 SSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K  L +          D+  V+         LT + + + +A +  D   +++ESD
Sbjct: 465 SPDSKWILTNYIGIGGWNNKDVALVNASGNGEIHNLTESGYSDGNAKWVLDGKAMIWESD 524

Query: 322 REG 324
           R G
Sbjct: 525 RAG 527



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 13/64 (20%)

Query: 388 EDSNLQAPTW------SPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASDP 440
                  P W      SP G ++ F+ K        +Y++    GR   +   PA+ + P
Sbjct: 16  STYAQDNPLWMRYCAISPDGTTIAFTYK------GDIYTVPSTGGRASQITTNPAHDTKP 69

Query: 441 QWVG 444
            W  
Sbjct: 70  IWSP 73


>gi|237726440|ref|ZP_04556921.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229434966|gb|EEO45043.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 1086

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 54/304 (17%), Positives = 116/304 (38%), Gaps = 38/304 (12%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  +  ++ EKG FN     + +  + G     +   +     +R+L+ + +  L    +
Sbjct: 228 DKSFYYLSEEKGSFN-----IFKRDIDGNTSKQI--TNHTKHPVRFLSAASNGTLC---Y 277

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
             + +            +++ ++  + D+   R    RS       S + K     ++ D
Sbjct: 278 GYDGEIYTVKEGAIPQKVQISIVTDKNDKDLIRQIK-RSGATEISLSPDAKEIAFVLRGD 336

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               +Y    + + T+++TNT        +SPD   IV+ S+R G  Q+Y       ++K
Sbjct: 337 ----VYVTSTEYSTTKQITNTPQQERDIHFSPDGRSIVYASERNGLWQIYQTSLAKKEEK 392

Query: 340 RISQ----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           + +           + + + F P +SP G  +AF +       I V+       R +++ 
Sbjct: 393 QFAYATDIKEERLTNSDITSFQPQYSPDGKEVAFLENRTT---IRVLNLKSKAVRTVMDG 449

Query: 390 SNLQAPT-------WSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASD 439
           +   + +       WSP  + ++ +    G   +K   L +   NG    L  +     +
Sbjct: 450 NYEYSYSDGDQWYQWSPDSKWILTNYIGIGGWNNKDVALVNASGNGEIHNLTESGYSDGN 509

Query: 440 PQWV 443
            +WV
Sbjct: 510 AKWV 513



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 84/240 (35%), Gaps = 37/240 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V            +I    +    P +S +GK+   +  
Sbjct: 30  AISPDGTTIAFTY--KGDIYTV----PSTGGRASQITTNPAHDTKPIWSPDGKKIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------REGK-E 326
           +  +MDI+ V+ +    +RLT         +Y  D+  I+F ++            G+ +
Sbjct: 84  RMGSMDIFEVNKEGGIPKRLTTHSGNETPVAY-KDAGHILFLANIMPTVEDAQFPSGQFQ 142

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIG 374
           Q+Y + + G      S        D   +  G+ + +               S     I 
Sbjct: 143 QVYEVNTEGGRPALFSSMP---MEDISINHTGNTLLYHDKKGYEDPWRKHHTSSITRDIW 199

Query: 375 VMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +   +G++   +    +   + P W+   +S  +  ++ G     ++  D++G     I 
Sbjct: 200 LCSLNGNRTFRKQTTFNGEDRTPVWASDDKSFYYLSEEKGSF--NIFKRDIDGNTSKQIT 257



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 65/202 (32%), Gaps = 30/202 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    IY+V        ++T     +    +SPD  +I F SDR 
Sbjct: 30  AISPDGTTIAFTYKGD----IYTVPSTGGRASQITTNPAHDTKPIWSPDGKKIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF-A 372
           G   ++ +   G   KR++         PV       I F           +F   +F  
Sbjct: 86  GSMDIFEVNKEGGIPKRLTTHSGNE--TPVAYKDAGHILFLANIMPTVEDAQFPSGQFQQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF----------SRKKDGDTGSKLYSID 422
           +  +  +G +   L     ++  + + +G +L++           +         ++   
Sbjct: 144 VYEVNTEGGRP-ALFSSMPMEDISINHTGNTLLYHDKKGYEDPWRKHHTSSITRDIWLCS 202

Query: 423 LNG--RNETLINTPAYASDPQW 442
           LNG                P W
Sbjct: 203 LNGNRTFRKQTTFNGEDRTPVW 224



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 92/248 (37%), Gaps = 33/248 (13%)

Query: 222 NQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              +  +  +    I R ++L     +R  ++   F      P ++S+ K      ++  
Sbjct: 180 KGYEDPWRKHHTSSITRDIWLCSLNGNRTFRKQTTFNGEDRTPVWASDDKSFYYLSEEKG 239

Query: 281 AMDIYSVDLQSNATERLTNT---------LFINISASYSPDSSQIVFESDREGKEQLYVM 331
           + +I+  D+  N ++++TN             N +  Y  D    ++        Q   +
Sbjct: 240 SFNIFKRDIDGNTSKQITNHTKHPVRFLSAASNGTLCYGYDGE--IYTVKEGAIPQKVQI 297

Query: 332 Q--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              ++ +D+  I Q K +   +   SP    IAF         + V   + S  + +   
Sbjct: 298 SIVTDKNDKDLIRQIKRSGATEISLSPDAKEIAFVLRGD----VYVTSTEYSTTKQITNT 353

Query: 390 SNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL------------NGRNETLINTPAY 436
              +    +SP GRS++++ +++G    ++Y   L            + + E L N+   
Sbjct: 354 PQQERDIHFSPDGRSIVYASERNGLW--QIYQTSLAKKEEKQFAYATDIKEERLTNSDIT 411

Query: 437 ASDPQWVG 444
           +  PQ+  
Sbjct: 412 SFQPQYSP 419



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSG 401
           QD          SP G  IAFT        I  +   G +  ++    ++   P WSP G
Sbjct: 20  QDNPLWMRYCAISPDGTTIAFTYKGD----IYTVPSTGGRASQITTNPAHDTKPIWSPDG 75

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + + F+  + G     ++ ++  G     + T +    P
Sbjct: 76  KKIAFASDRMGSM--DIFEVNKEGGIPKRLTTHSGNETP 112



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 77/234 (32%), Gaps = 29/234 (12%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    + ++   K  +  +   G     +T +      +P +SP+ +K+A+A+      +
Sbjct: 31  ISPDGTTIAFTYKGDIYTVPSTGGRASQITTNPAH-DTKPIWSPDGKKIAFASDRMGS-M 88

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----------VQKDEAMDIYSV 287
            ++ ++ +    PKR+           +   G    ++              +   +Y V
Sbjct: 89  DIFEVN-KEGGIPKRLTTHSGNETPVAYKDAGHILFLANIMPTVEDAQFPSGQFQQVYEV 147

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSN 334
           + +       ++    +IS   +   + +++  D++G                +++   N
Sbjct: 148 NTEGGRPALFSSMPMEDIS--INHTGNTLLYH-DKKGYEDPWRKHHTSSITRDIWLCSLN 204

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           G+   R           PVW+       +       F I     DG+  + +  
Sbjct: 205 GNRTFRKQTTFNGEDRTPVWASDDKSFYYLSEEKGSFNIFKRDIDGNTSKQITN 258



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 49/123 (39%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F+P++SP+ ++VA+        +L +     R         ++       ++
Sbjct: 405 LTNSDITSFQPQYSPDGKEVAFLENRTTIRVLNLKSKAVRTVMDGNYEYSYSDGDQWYQW 464

Query: 266 SSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K  L +          D+  V+         LT + + + +A +  D   +++ESD
Sbjct: 465 SPDSKWILTNYIGIGGWNNKDVALVNASGNGEIHNLTESGYSDGNAKWVLDGKAMIWESD 524

Query: 322 REG 324
           R G
Sbjct: 525 RAG 527



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 13/64 (20%)

Query: 388 EDSNLQAPTW------SPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASDP 440
                  P W      SP G ++ F+ K        +Y++    GR   +   PA+ + P
Sbjct: 16  STYAQDNPLWMRYCAISPDGTTIAFTYK------GDIYTVPSTGGRASQITTNPAHDTKP 69

Query: 441 QWVG 444
            W  
Sbjct: 70  IWSP 73


>gi|116621582|ref|YP_823738.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224744|gb|ABJ83453.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 898

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 73/380 (19%), Positives = 128/380 (33%), Gaps = 40/380 (10%)

Query: 76  SDVFNLISQDSFKQKITNPDSI--PRFQDWNSL---GAQVLVTGRVIKEGKDRLRVEFRL 130
           S +F + S       +T PD++    F  W  +   G  +        E        F  
Sbjct: 469 SGLFQVDSSGGTPVPLTTPDAMRGEDFHYWPQVLPEGRFLYFARSSKPEYTGVYAASFAA 528

Query: 131 WDVKDRKQII---GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
                  Q++       ++  AS RK  H +     Q  T     F++  L      +SG
Sbjct: 529 --PNKPVQLLHTLTNAVYAPGASDRKKGHLLW---LQGSTLVAQAFDAAAL-----RLSG 578

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +     +   G + + +  + D  +   R S +Q +  +  YD    L          
Sbjct: 579 EPRPVADPVASLGLHGQMVAAASDTGILLYRASNSQSQ--FVWYDPTGRL------IAPF 630

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
             P   G F         S++G+R   +      +D+++V++    + RLT+   I+IS 
Sbjct: 631 AEPAVFGQF-------SISTDGRRVATARAGSGGVDLWTVEVDRGVSTRLTSLPGISISP 683

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++S D S I F S       LY   S G+  ++         F    S  G  I + +  
Sbjct: 684 AWSSDGSAIFFAS--GSPFNLYRKDSIGAGPEQRLTQSPHPQFPTDCSLDGRWILYDEQV 741

Query: 368 GEKFAIGVMK--KDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +  I V+         RL L    N  +  +SP G+ + F   + G+    + S    
Sbjct: 742 RNQSTIRVLPAAPATGDSRLYLKSSFNQGSAHFSPDGKWIAFQSDESGENEVYIASFPEP 801

Query: 425 GRNETLINTPAYASDPQWVG 444
                +         P W  
Sbjct: 802 HGKLRVSTKGG--RFPHWAA 819



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 91/277 (32%), Gaps = 11/277 (3%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
               ++ + F ++          ++D +       +    +    +     S      + 
Sbjct: 560 QGSTLVAQAFDAAALRLSGEPRPVADPVASLGLHGQMVAAASDTGILLYRASNSQSQFVW 619

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR-APKRI 253
               D         +   +  +   S + ++VA A         V L    +DR    R+
Sbjct: 620 ---YDPTGRLIAPFAEPAVFGQFSISTDGRRVATARAGSGG---VDLWTVEVDRGVSTRL 673

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFINISASYSPD 312
            +   + ++P +SS+G     +       ++Y  D + +   +RLT +         S D
Sbjct: 674 TSLPGISISPAWSSDGSAIFFAS--GSPFNLYRKDSIGAGPEQRLTQSPHPQFPTDCSLD 731

Query: 313 SSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              I+++     +  + V+ +   +   R+      +     +SP G  IAF      + 
Sbjct: 732 GRWILYDEQVRNQSTIRVLPAAPATGDSRLYLKSSFNQGSAHFSPDGKWIAFQSDESGEN 791

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            + +        +L V     + P W+  GR L +  
Sbjct: 792 EVYIASFPEPHGKLRVSTKGGRFPHWAAGGRRLFYLS 828



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 12/127 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S SPD     +    +G   L+V        + +   + A+   P WS  G  IAF  ++
Sbjct: 373 SLSPDGRNAAYVVAAKGTTNLWVRALGDGTARMLDSTEGAAL--PFWSHDGKSIAF--WA 428

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G K  +  +   G   R + E       +W+P G  +++     G   S L+ +D +G  
Sbjct: 429 GGK--LQRIDLAGGAPRTICETRLTVGGSWAP-GGQILY-----GGWSSGLFQVDSSGGT 480

Query: 428 ETLINTP 434
              + TP
Sbjct: 481 PVPLTTP 487



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 49/159 (30%), Gaps = 17/159 (10%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           S       S +G+ A   V      +++   L       L +T        +S D   I 
Sbjct: 367 SNASGLSLSPDGRNAAYVVAAKGTTNLWVRALGDGTARMLDSTEGA-ALPFWSHDGKSIA 425

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F +      +L  +   G   + I   +        W+P G  I +  +S   F +    
Sbjct: 426 FWA----GGKLQRIDLAGGAPRTI--CETRLTVGGSWAPGGQ-ILYGGWSSGLFQV---D 475

Query: 378 KDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKK 410
             G     L     ++       P   P GR L F+R  
Sbjct: 476 SSGGTPVPLTTPDAMRGEDFHYWPQVLPEGRFLYFARSS 514



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 52/161 (32%), Gaps = 26/161 (16%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +  AY            L    +     R+ +       P +S +GK         
Sbjct: 375 SPDGRNAAYVVAAKG---TTNLWVRALGDGTARMLDSTEGAALPFWSHDGKSIAFWA--- 428

Query: 280 EAMDIYSVDLQSNATE-----RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               +  +DL   A       RLT      +  S++P    +           L+ + S+
Sbjct: 429 -GGKLQRIDLAGGAPRTICETRLT------VGGSWAPGGQILY----GGWSSGLFQVDSS 477

Query: 335 GSDQKRISQ----DKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           G     ++       E  ++ P   P+G  + F + S  ++
Sbjct: 478 GGTPVPLTTPDAMRGEDFHYWPQVLPEGRFLYFARSSKPEY 518



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 30/102 (29%), Gaps = 6/102 (5%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
               ++      SP G   A+   +     + V        R+L        P WS  G+
Sbjct: 363 FASSSNASGLSLSPDGRNAAYVVAAKGTTNLWVRALGDGTARMLDSTEGAALPFWSHDGK 422

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           S+ F        G KL  IDL G     I          W  
Sbjct: 423 SIAFWA------GGKLQRIDLAGGAPRTICETRLTVGGSWAP 458


>gi|327539441|gb|EGF26056.1| TolB protein [Rhodopirellula baltica WH47]
          Length = 1174

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 61/283 (21%), Positives = 102/283 (36%), Gaps = 37/283 (13%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             S   K  L V+  DG  +R L         +  P +SP+ +++AY            LM
Sbjct: 882  SSPDPKPVLSVVRLDGTGLRDLAEPTGSMTRVGSPDWSPDGKQIAY-NQHAGSTRTARLM 940

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTL 301
               +         F SM   P +S +GK+   S        +  +    +    L     
Sbjct: 941  RIEVSGGVPVDLGFGSM---PTYSPDGKQIAFSAAGQG---VGIMAADGSNRTILDPRGW 994

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-----YFDPVWSP 356
             I     +SP  + + +         L++   N S  + I Q   A+      ++  WSP
Sbjct: 995  GIQ----WSPRPNLLTYSI----GGNLFIWDLNTSSSRPILQGPYATRYSYIDWNISWSP 1046

Query: 357  QGDLIAF--TKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDG 412
             G+LIA    +       I V+     S+ R+L   + +    +WS   R L+F      
Sbjct: 1047 DGELIAIKGRRRDNSDDEIAVVTVSAPSRLRVLASPTKIGGDFSWSSDSRHLLFPMLDIE 1106

Query: 413  DTGSKLYSIDL--NGRNETLINTPAY--------ASDPQWVGF 445
               S+L+SID+  +G  +   N P+         + D  W  F
Sbjct: 1107 SGRSRLHSIDVAASGLPKIWPNQPSDRQIFGIDLSIDGTWFAF 1149



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 72/198 (36%), Gaps = 13/198 (6%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            +M  DG+N   L P    I    ++SP    + Y+   +  I  +    +R         
Sbjct: 978  IMAADGSNRTILDPRGWGI----QWSPRPNLLTYSIGGNLFIWDLNTSSSRPILQGPYAT 1033

Query: 255  NFRSMILAPRFSSNGKRALISVQK----DEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             +  +     +S +G+   I  ++    D+ + + +V   S     L +   I    S+S
Sbjct: 1034 RYSYIDWNISWSPDGELIAIKGRRRDNSDDEIAVVTVSAPSR-LRVLASPTKIGGDFSWS 1092

Query: 311  PDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKF 366
             DS  ++F       G+ +L+ +    S   +I  ++ +    F    S  G   AFT  
Sbjct: 1093 SDSRHLLFPMLDIESGRSRLHSIDVAASGLPKIWPNQPSDRQIFGIDLSIDGTWFAFTAQ 1152

Query: 367  SGEKFAIGVMKKDGSQER 384
               +      + + S  +
Sbjct: 1153 PESRVVPWRRQPESSPYQ 1170



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 43/102 (42%), Gaps = 7/102 (6%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPSGR 402
            S      S + + +  +     K  + V++ DG+  R L E +     + +P WSP G+
Sbjct: 864 TSTTWNQVSLRAEEMLVSSSPDPKPVLSVVRLDGTGLRDLAEPTGSMTRVGSPDWSPDGK 923

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            + +++       ++L  I+++G    +     + S P +  
Sbjct: 924 QIAYNQHAGSTRTARLMRIEVSGG---VPVDLGFGSMPTYSP 962


>gi|284040891|ref|YP_003390821.1| hypothetical protein Slin_6060 [Spirosoma linguale DSM 74]
 gi|283820184|gb|ADB42022.1| WD40 domain protein beta Propeller [Spirosoma linguale DSM 74]
          Length = 510

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/239 (19%), Positives = 93/239 (38%), Gaps = 22/239 (9%)

Query: 204 RYLTPSRDQILFEPRFS-PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           + +   +   +  P +S    +   Y+          Y + +     P            
Sbjct: 192 QVIVKDKVNTVNGPVWSFRIGEVPDYSFIFARRTNGQYQIFSANATGPAVQLTRDGSNWR 251

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----FINISASYSPDSSQIV 317
           P  S N ++       +  + +Y ++       ++T          ++S S+SPD +Q++
Sbjct: 252 PVASPNRQQIAFISNVNTELHLYVMNANGTNIRQVTTVPISGLYQTDLSFSWSPDGTQLL 311

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKF--AIG 374
           + S     ++LY ++++G+  + +SQ      F    W+PQG+ IA        +   I 
Sbjct: 312 YPS----NDRLYAVRTDGTGLRVVSQASGGRVFAGCDWTPQGNRIAARTTGTSVYDNEIT 367

Query: 375 VMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDG-------DTGSKLYSIDLN 424
               DGS  +L+     + +  P +S  GR L+FS    G          ++LY +DLN
Sbjct: 368 TFMADGSALKLVYSQRSARVGNPAFSVDGRRLVFSADSSGFMNEQGRQLDARLYLLDLN 426



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 46/278 (16%), Positives = 101/278 (36%), Gaps = 42/278 (15%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           F+     +G  +  +   +  G  ++     RD   + P  SPN+Q++A+ + +    L 
Sbjct: 219 FIFARRTNG--QYQIFSANATGPAVQLT---RDGSNWRPVASPNRQQIAFIS-NVNTELH 272

Query: 239 VYLMDTRIDRAPKR----IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +Y+M+       +     I       L+  +S +G + L          +Y+V       
Sbjct: 273 LYVMNANGTNIRQVTTVPISGLYQTDLSFSWSPDGTQLLY----PSNDRLYAVRTDGTGL 328

Query: 295 ERLTNTLFINISA--SYSPDSSQIVF--ESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             ++      + A   ++P  ++I            ++    ++GS  K +   + A   
Sbjct: 329 RVVSQASGGRVFAGCDWTPQGNRIAARTTGTSVYDNEITTFMADGSALKLVYSQRSARVG 388

Query: 351 DPVWSPQGDLIAFTKFSGEKFA---------IGVMKKDGSQERLLV-------------- 387
           +P +S  G  + F+  S              + ++  + +    L               
Sbjct: 389 NPAFSVDGRRLVFSADSSGFMNEQGRQLDARLYLLDLNTNGIISLSSSQSSSGTGAAGKP 448

Query: 388 EDSNLQAPTWSPSGRSLIFS-RKKDGDTGSKLYSIDLN 424
             +N   P +SP+G  +IF+     G+    +Y++DLN
Sbjct: 449 AGTNDLDPRFSPNGAQIIFTNTDNTGNGVRSVYTLDLN 486



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 75/197 (38%), Gaps = 22/197 (11%)

Query: 262 APRFS------SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            P +S       +      + + +    I+S +  +    +LT     N     SP+  Q
Sbjct: 204 GPVWSFRIGEVPDYSFI-FARRTNGQYQIFSANA-TGPAVQLTRD-GSNWRPVASPNRQQ 260

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQ----DKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           I F S+   +  LYVM +NG++ ++++         +     WSP G  + +        
Sbjct: 261 IAFISNVNTELHLYVMNANGTNIRQVTTVPISGLYQTDLSFSWSPDGTQLLYPSND---- 316

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  ++ DG+  R++ + S  +      W+P G  +           +++ +   +G   
Sbjct: 317 RLYAVRTDGTGLRVVSQASGGRVFAGCDWTPQGNRIAARTTGTSVYDNEITTFMADGSAL 376

Query: 429 TLINT--PAYASDPQWV 443
            L+ +   A   +P + 
Sbjct: 377 KLVYSQRSARVGNPAFS 393


>gi|299137326|ref|ZP_07030508.1| peptidase S41 [Acidobacterium sp. MP5ACTX8]
 gi|298600731|gb|EFI56887.1| peptidase S41 [Acidobacterium sp. MP5ACTX8]
          Length = 1128

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 75/220 (34%), Gaps = 13/220 (5%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D D     ++      +      +P+     +    +     V+ +  R  R  K  G
Sbjct: 295 MSDFDQMREHWVKKPVSYLTEV-HIAPDGSSAVFTARGE-----VFTLPVRSGRIIKVAG 348

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFI-NISASYSPD 312
           +  +     RF  +GK  +    +    + +          E+ T+   +       SPD
Sbjct: 349 DSATRYRGARFLPDGKSVVALSTESGETEFWKYPANGEGKPEQWTHDAKVLRWEGVPSPD 408

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF- 371
              +      +  EQL+V  +     KRI+Q     + D  WSP    +A+ + +  +F 
Sbjct: 409 GRWLA---HHDKDEQLWVYDTKTKQSKRIAQSTTGDFSDLSWSPDSRWLAYVETAENQFS 465

Query: 372 AIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKK 410
              V+  +      +  D      P WS  G+ L F   +
Sbjct: 466 QTKVLNVESGAITTITSDRYNSVNPIWSSDGKWLYFLSDR 505



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 111/308 (36%), Gaps = 33/308 (10%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            +D +    +     +N R+ F+S+         ++  MD++G +++  +      +   
Sbjct: 209 AADWV--GTSHNPMFWNGRVYFLSDRDG----VMNVWSMDQEGHDLKQESHQHGFDIEAA 262

Query: 218 RFSPNQQKVAYATYD---------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             S +   V     D          E ++ + LM          +    S +     + +
Sbjct: 263 SVS-DGNMVYACGADLWSLDLKTGHETVIPITLMSDFDQMREHWVKKPVSYLTEVHIAPD 321

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQ 327
           G  A+ + +     +++++ ++S    ++          A + PD   +V  S   G+ +
Sbjct: 322 GSSAVFTARG----EVFTLPVRSGRIIKVAGDSATRYRGARFLPDGKSVVALSTESGETE 377

Query: 328 LYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +   +NG    ++ + D +   ++ V SP G  +A      +   + V      Q + +
Sbjct: 378 FWKYPANGEGKPEQWTHDAKVLRWEGVPSPDGRWLA---HHDKDEQLWVYDTKTKQSKRI 434

Query: 387 --VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN------TPAYAS 438
                 +    +WSP  R L +    +            +G   T+ +       P ++S
Sbjct: 435 AQSTTGDFSDLSWSPDSRWLAYVETAENQFSQTKVLNVESGAITTITSDRYNSVNPIWSS 494

Query: 439 DPQWVGFM 446
           D +W+ F+
Sbjct: 495 DGKWLYFL 502



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 69/180 (38%), Gaps = 17/180 (9%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                + P     G   + + + D    ++SV++   A  RLT++  +   AS SPD   
Sbjct: 33  HGGYYVDPAVH--GDTLIFTSEGD----LWSVNVHGGAAHRLTSSPGLERMASISPDGLT 86

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + F +  EG +++Y +   G   +R + D  A      W P G L+  T         G+
Sbjct: 87  VAFSAQYEGPDEVYTIPITGGMPQRKTWDGGA--VPVGWKPDGRLVISTNRYSTLPDPGL 144

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSIDLNGR 426
           +      ER  V  +      +S  G++L F+R         +  G     ++  D  G 
Sbjct: 145 VLVGSHGERERVPLATGSEAAYSADGKTLFFTRFEKQWSNTKRYKGGWPQSIWRFDGQGE 204



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 71/170 (41%), Gaps = 10/170 (5%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDIL 237
            V+ S  SG  +      + +G   ++   ++  +    P  SP+ + +A+   D+    
Sbjct: 366 VVALSTESGETEFWKYPANGEGKPEQWTHDAKVLRWEGVP--SPDGRWLAHHDKDE---- 419

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATER 296
           ++++ DT+  ++ +   +         +S + +        +++      ++++S A   
Sbjct: 420 QLWVYDTKTKQSKRIAQSTTGDFSDLSWSPDSRWLAYVETAENQFSQTKVLNVESGAITT 479

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +T+  + +++  +S D   + F SDR  K    VM   GS   +   D+ 
Sbjct: 480 ITSDRYNSVNPIWSSDGKWLYFLSDRMLKTT--VMSPWGSRMPQPHFDRP 527



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 85/254 (33%), Gaps = 29/254 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  ++  G     LT S   +      SP+   VA+ +   E    VY +        +
Sbjct: 54  DLWSVNVHGGAAHRLT-SSPGLERMASISPDGLTVAF-SAQYEGPDEVYTIPITGGMPQR 111

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +   +    +   +  +G R +IS  +   +    + L  +  ER    L     A+YS 
Sbjct: 112 K--TWDGGAVPVGWKPDG-RLVISTNRYSTLPDPGLVLVGSHGERERVPLATGSEAAYSA 168

Query: 312 DSSQIVFE----------SDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           D   + F             + G  Q ++     G      +     S+    W+     
Sbjct: 169 DGKTLFFTRFEKQWSNTKRYKGGWPQSIWRFDGQGEAVAMAADWVGTSHNPMFWN---GR 225

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           + F         +  M ++G   +        +++A + S  G  +          G+ L
Sbjct: 226 VYFLSDRDGVMNVWSMDQEGHDLKQESHQHGFDIEAASVS-DGNMVY-------ACGADL 277

Query: 419 YSIDLNGRNETLIN 432
           +S+DL   +ET+I 
Sbjct: 278 WSLDLKTGHETVIP 291



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 79/222 (35%), Gaps = 29/222 (13%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              + + +  + D+  V +       A  R+ +   +      S +G     S Q +   
Sbjct: 44  GDTLIFTS--EGDLWSVNVH----GGAAHRLTSSPGLERMASISPDGLTVAFSAQYEGPD 97

Query: 283 DIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           ++Y++ +     +R T +   + +   + PD   ++  +         ++      ++  
Sbjct: 98  EVYTIPITGGMPQRKTWDGGAVPVG--WKPDGRLVISTNRYSTLPDPGLVLVGSHGERE- 154

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFS---------GEKFAIGVMKKDGSQERLLVE---- 388
            +   A+  +  +S  G  + FT+F             +   + + DG  E + +     
Sbjct: 155 -RVPLATGSEAAYSADGKTLFFTRFEKQWSNTKRYKGGWPQSIWRFDGQGEAVAMAADWV 213

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            ++     W  +GR + F   +DG     ++S+D  G +   
Sbjct: 214 GTSHNPMFW--NGR-VYFLSDRDG--VMNVWSMDQEGHDLKQ 250



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/337 (13%), Positives = 99/337 (29%), Gaps = 86/337 (25%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           L +S +  S +    L ++   G   R    +  +      +S + + + +  ++ +   
Sbjct: 129 LVISTNRYSTLPDPGLVLVGSHGERERVPLATGSEA----AYSADGKTLFFTRFEKQWSN 184

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRF-----SS---NGKRALISVQKDEAMDIYSVDL 289
                        +  G   ++ +A  +     +    NG R      +D  M+++S+D 
Sbjct: 185 TKRYKGGWPQSIWRFDGQGEAVAMAADWVGTSHNPMFWNG-RVYFLSDRDGVMNVWSMDQ 243

Query: 290 QSNATERLTNTLFINISAS---------------YS------------------------ 310
           + +  ++ ++    +I A+               +S                        
Sbjct: 244 EGHDLKQESHQHGFDIEAASVSDGNMVYACGADLWSLDLKTGHETVIPITLMSDFDQMRE 303

Query: 311 ----------------PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                           PD S  VF +    + +++ +        +++ D    Y    +
Sbjct: 304 HWVKKPVSYLTEVHIAPDGSSAVFTA----RGEVFTLPVRSGRIIKVAGDSATRYRGARF 359

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTW----SPSGRSLIFSRK 409
            P G  +        +        +G  +      D+ +    W    SP GR L     
Sbjct: 360 LPDGKSVVALSTESGETEFWKYPANGEGKPEQWTHDAKVL--RWEGVPSPDGRWLA---- 413

Query: 410 KDGDTGSKLYSIDLNGRNETLI--NTPAYASDPQWVG 444
              D   +L+  D   +    I  +T    SD  W  
Sbjct: 414 -HHDKDEQLWVYDTKTKQSKRIAQSTTGDFSDLSWSP 449



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 42/132 (31%), Gaps = 7/132 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                +  +       ++F S+ +    L+ +  +G    R++            SP G 
Sbjct: 33  HGGYYVDPAV--HGDTLIFTSEGD----LWSVNVHGGAAHRLTS-SPGLERMASISPDGL 85

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF+        +  +   G   +    D       W P GR +I + +        L 
Sbjct: 86  TVAFSAQYEGPDEVYTIPITGGMPQRKTWDGGAVPVGWKPDGRLVISTNRYSTLPDPGLV 145

Query: 420 SIDLNGRNETLI 431
            +  +G  E + 
Sbjct: 146 LVGSHGERERVP 157


>gi|153808296|ref|ZP_01960964.1| hypothetical protein BACCAC_02584 [Bacteroides caccae ATCC 43185]
 gi|149129199|gb|EDM20415.1| hypothetical protein BACCAC_02584 [Bacteroides caccae ATCC 43185]
          Length = 1096

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 59/304 (19%), Positives = 119/304 (39%), Gaps = 44/304 (14%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ EKG FN     + +          +    +    +R+L+ + +  L    +  N
Sbjct: 230 FYYLSEEKGSFN-----IFQRTPGANTSKQITFHTK--HPVRFLSMASEGKLC---YGYN 279

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            +            + + ++  +ID+   ++I ++ +  +A   S  GK     ++ D  
Sbjct: 280 GEIYTLVPGGQPQKVNITILSDKIDKDIIRQIRSYGATDIA--VSPKGKEVAFIMRGD-- 335

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +Y   +    T+++TNT       S++PD   +V+ S+R G  QLY       ++K+ 
Sbjct: 336 --VYVTSIDYKTTKQITNTPDQERDISFAPDGRTLVYSSERNGLWQLYTSTIVRKEEKQF 393

Query: 342 SQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--- 388
           +   E           + F P +SP G  IAF +      AI V+       R +++   
Sbjct: 394 TYATELKEECLTKSNVASFQPQYSPDGKEIAFLENRT---AIRVINLKSKAVRTVMDAKY 450

Query: 389 -----DSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD-- 439
                D +     WSP  + ++  F     G     +  +  +G+ E +  T +  SD  
Sbjct: 451 QYSYADGDQWF-QWSPDSKWILSDFI-GIGGWNNKDVVLLKADGKGEMVNLTESGYSDTN 508

Query: 440 PQWV 443
            +WV
Sbjct: 509 AKWV 512



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 65/205 (31%), Gaps = 33/205 (16%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    IY+V        ++T     + +  +SPD  QI F SDR 
Sbjct: 30  ALSPDGTTIAFTYKGD----IYTVPSTGGRATQITTNPAFDTTPVWSPDGKQIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFA 372
           G   ++V+   G   +R++    +    PV       I FT             SG+   
Sbjct: 86  GSLDVFVVAKEGGVPQRLTTHSGSE--KPVAYKDDKHILFTANIAPSAEDAGFPSGQFQQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-----------DTGSKLYSI 421
           I  +   G +       S++     S +   ++  + K G                ++S 
Sbjct: 144 IYEVAVTGGRP---TMFSSMPMECISINKEGIMLYQDKKGYEDYWRKHQVSPIARDIWSY 200

Query: 422 DLNGRN--ETLINTPAYASDPQWVG 444
                   +          +P W  
Sbjct: 201 TPGKTPVYQKQTTFGGEDREPVWAP 225



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 71/229 (31%), Gaps = 48/229 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V            +I    +    P +S +GK+   +  
Sbjct: 30  ALSPDGTTIAFTY--KGDIYTV----PSTGGRATQITTNPAFDTTPVWSPDGKQIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------REGK-E 326
           +  ++D++ V  +    +RLT             D   I+F ++            G+ +
Sbjct: 84  RMGSLDVFVVAKEGGVPQRLTTHSGSE-KPVAYKDDKHILFTANIAPSAEDAGFPSGQFQ 142

Query: 327 QLYVMQSNGSDQKRIS--------------------QDKEASYFDPVWSPQGDLIAFTKF 366
           Q+Y +   G      S                    +  E  +     SP    I    +
Sbjct: 143 QIYEVAVTGGRPTMFSSMPMECISINKEGIMLYQDKKGYEDYWRKHQVSPIARDIW--SY 200

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +  K  +         ++        + P W+P G+S  +  ++ G   
Sbjct: 201 TPGKTPVY--------QKQTTFGGEDREPVWAPDGKSFYYLSEEKGSFN 241



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 81/233 (34%), Gaps = 25/233 (10%)

Query: 222 NQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              +  +  +    I R ++          ++   F      P ++ +GK      ++  
Sbjct: 179 KGYEDYWRKHQVSPIARDIWSYTPGKTPVYQKQTTFGGEDREPVWAPDGKSFYYLSEEKG 238

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + +I+     +N ++++T      +         ++ +        ++Y +   G  QK 
Sbjct: 239 SFNIFQRTPGANTSKQITFHTKHPVRFLSMASEGKLCY----GYNGEIYTLVPGGQPQKV 294

Query: 341 -------------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                        I Q +     D   SP+G  +AF         + V   D    + + 
Sbjct: 295 NITILSDKIDKDIIRQIRSYGATDIAVSPKGKEVAFIMRGD----VYVTSIDYKTTKQIT 350

Query: 388 EDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
              + +   +++P GR+L++S +++G    +LY+  +  + E          +
Sbjct: 351 NTPDQERDISFAPDGRTLVYSSERNGLW--QLYTSTIVRKEEKQFTYATELKE 401



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 34/90 (37%), Gaps = 7/90 (7%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              SP G  IAFT        I  +   G +  ++    +    P WSP G+ + F+  +
Sbjct: 29  CALSPDGTTIAFTYKGD----IYTVPSTGGRATQITTNPAFDTTPVWSPDGKQIAFASDR 84

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            G     ++ +   G     + T + +  P
Sbjct: 85  MGS--LDVFVVAKEGGVPQRLTTHSGSEKP 112



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/188 (13%), Positives = 62/188 (32%), Gaps = 13/188 (6%)

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
           K+  ++P   R I+           +   G +    L+ S  V     + +         
Sbjct: 347 KQITNTPDQERDISFAPDGRTLVYSSERNGLWQ---LYTSTIVRKEEKQFTYAT-----E 398

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMI 260
                    +   F+P++SP+ +++A+        ++ +     R     K   ++    
Sbjct: 399 LKEECLTKSNVASFQPQYSPDGKEIAFLENRTAIRVINLKSKAVRTVMDAKYQYSYADGD 458

Query: 261 LAPRFSSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQI 316
              ++S + K  L            D+  +          LT + + + +A +      +
Sbjct: 459 QWFQWSPDSKWILSDFIGIGGWNNKDVVLLKADGKGEMVNLTESGYSDTNAKWVLGGKAM 518

Query: 317 VFESDREG 324
           ++ SDR G
Sbjct: 519 IWNSDRSG 526


>gi|300709435|ref|YP_003735249.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halalkalicoccus jeotgali B3]
 gi|299123118|gb|ADJ13457.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halalkalicoccus jeotgali B3]
          Length = 666

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 81/231 (35%), Gaps = 55/231 (23%)

Query: 260 ILAPRFSSNGKRALISVQ-----KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +  P+ S +G+R           ++    I+   L    + R T T  I+    +SP   
Sbjct: 15  VSDPQLSPDGERVAFVRTTPRDAEESEATIHIASLGGEGSRRFTLTAGIDSEPRWSPSGD 74

Query: 315 QIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------- 365
            + F S R  + + QL+V  ++G + +RI+ +      +  W P G+ IAF +       
Sbjct: 75  HLSFVSTRGDDDRPQLWVAPADGGEARRIT-EGVGGVSNIAWRPDGEGIAFVQSSTGEDR 133

Query: 366 ----------------------------------FSGEKFAIGVMKKDGSQERLLVEDSN 391
                                             F G    + V   DG   RL   + +
Sbjct: 134 EEGRDIEQRDPDYEPETPDPRVIDRLIYRAGARYFDGGHSHVYVADVDGGVTRLTDGEYD 193

Query: 392 LQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDL-NGRNETLINTPAYA 437
              P W     +L ++ K+    D +    + + D+ +G  E L  T  +A
Sbjct: 194 YVTPEWG-DSETLYYAAKRTDDPDDNAVHDVIAYDVESGTEEVLTETTGWA 243



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/319 (16%), Positives = 88/319 (27%), Gaps = 106/319 (33%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILR---VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           + +P+ SP+ ++VA+      D         + +      +R      +   PR+S +G 
Sbjct: 15  VSDPQLSPDGERVAFVRTTPRDAEESEATIHIASLGGEGSRRFTLTAGIDSEPRWSPSGD 74

Query: 271 RALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--------- 319
                  +  D+   ++          R+T  +    + ++ PD   I F          
Sbjct: 75  HLSFVSTRGDDDRPQLWVAPADGGEARRITEGVGGVSNIAWRPDGEGIAFVQSSTGEDRE 134

Query: 320 ---------------------SDR-----------EGKEQLYVMQSNGSDQKRISQDKEA 347
                                 DR            G   +YV   +G    R++ D E 
Sbjct: 135 EGRDIEQRDPDYEPETPDPRVIDRLIYRAGARYFDGGHSHVYVADVDGG-VTRLT-DGEY 192

Query: 348 SYFDPVWS--------------PQ----GDLIAFTKFSG--------------------E 369
            Y  P W               P      D+IA+   SG                     
Sbjct: 193 DYVTPEWGDSETLYYAAKRTDDPDDNAVHDVIAYDVESGTEEVLTETTGWAVGLAATADG 252

Query: 370 KFAIGVMKKDGSQERLL------------------VEDSNLQAPTWSPSGRSLIFSRKKD 411
           + A       GS  R                    ++ +    P W P G  L F    +
Sbjct: 253 RVAYHYTPDGGSTLRQTDLRVFDRGTETETTLTETLDRTVEGTPKWDPHGEYLYFLAPDE 312

Query: 412 GDTGSKLYSIDLNGRNETL 430
           GD    L  +  +G  ET+
Sbjct: 313 GDV--SLRRVREDGEVETV 329



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 89/296 (30%), Gaps = 38/296 (12%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+ FV  +        +   +   G            I  EPR+SP+   +++ +   +D
Sbjct: 26  RVAFVRTTPRDAEESEATIHIASLGGEGSRRFTLTAGIDSEPRWSPSGDHLSFVSTRGDD 85

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                 +        +RI      +    +  +G+                   +    E
Sbjct: 86  DRPQLWVAPADGGEARRITEGVGGVSNIAWRPDGEGIAFVQSSTGEDRE-----EGRDIE 140

Query: 296 RLTNTLFINISASYSPDSS---QIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEAS 348
           +       +     +PD     ++++ +       G   +YV   +G    R++ D E  
Sbjct: 141 Q----RDPDYEPE-TPDPRVIDRLIYRAGARYFDGGHSHVYVADVDGG-VTRLT-DGEYD 193

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKK------DGSQERLLVEDSNLQAPTWSPSGR 402
           Y  P W     L    K + +     V          G++E L            +  GR
Sbjct: 194 YVTPEWGDSETLYYAAKRTDDPDDNAVHDVIAYDVESGTEEVLTETTGWAVGLAATADGR 253

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRN------------ETLINTPAYASDPQWVGFM 446
            + +    DG +  +   + +  R              T+  TP +    +++ F+
Sbjct: 254 -VAYHYTPDGGSTLRQTDLRVFDRGTETETTLTETLDRTVEGTPKWDPHGEYLYFL 308



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 81/240 (33%), Gaps = 22/240 (9%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  Y+  T +    + R+++ + +       + + V D DG   R      +     P +
Sbjct: 143 DPDYEPETPDPRVID-RLIYRAGARYFDGGHSHVYVADVDGGVTR--LTDGEYDYVTPEW 199

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             + + + YA    +D     + D           + +       +    +++G R    
Sbjct: 200 -GDSETLYYAAKRTDDPDDNAVHDVIAYDVESGTEEVLTETTGWAVGLAATADG-RVAYH 257

Query: 276 VQKDEAMDIYSVDLQ-------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
              D    +   DL+       +  T   T    +  +  + P    + F +  EG   L
Sbjct: 258 YTPDGGSTLRQTDLRVFDRGTETETTLTETLDRTVEGTPKWDPHGEYLYFLAPDEGDVSL 317

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLV 387
             ++ +G + + +++D     FD    P  D +A TK        + V    G++   L 
Sbjct: 318 RRVREDG-EVETVARDGHIDGFD----PGRDAVAMTKSEWDHPGDVFVSTPAGAETNRLT 372


>gi|86159321|ref|YP_466106.1| WD-40-like beta propeller repeat-containing protein
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775832|gb|ABC82669.1| WD-40 repeat-containing protein [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 704

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 56/280 (20%), Positives = 103/280 (36%), Gaps = 30/280 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA---------- 229
           V+  V +G  + +      DG  +     S  + L+     P++  +A A          
Sbjct: 394 VARRVGTGAERYTSLAASADGRRLVLTQASPKRTLWRVALGPDRADLAGARPIPLTTGTG 453

Query: 230 -TYDDEDILRVYLMDTRIDRAPKRIGNFRS----------MILAPRFSSNGKRALISVQK 278
            +        VY+          ++ +  S          +  AP    +G+R     ++
Sbjct: 454 GSPRLGPGYLVYVSAKGAGDGLWKLQDGASTELWSQPGARIAGAPAVRRDGRRIAFWTRE 513

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                +  VD        +T+ L ++ + ++ PD + +   +   G  +L+ +   G   
Sbjct: 514 GGRTRLRVVDADGTGGRVVTDALQLSGAPAWMPDGASLAVGAIVNGAPRLFRVPLEGGAP 573

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERL--LVEDSNLQAP 395
             +  +  A   DP WSP GDL AFT    G  F +  +  DGS  R+  L      +  
Sbjct: 574 APLVAEPSA---DPAWSPAGDLFAFTGADVGTTFPLKAVNADGSAHRMPPLTLTRGERHV 630

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTP 434
            + P GRS+     +       L ++DL +G +  LI  P
Sbjct: 631 AFLPGGRSIAVL--RGEIRRKHLAAVDLASGASRPLIVLP 668



 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 62/313 (19%), Positives = 115/313 (36%), Gaps = 35/313 (11%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G++ FS+PA     AH            +    + R ++  +  +    +  L  +  DG
Sbjct: 302 GRRLFSAPAGLH--AHF-----------QTWAPDQRFVYFVQGALPD--RLDLWRIRADG 346

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           ++        D ++  P F  + + + Y   D +            D   +R+G      
Sbjct: 347 SSAPERLTHHDGVVSHPVFV-DARMLLYLATDADGSGPWLHALDVEDGVARRVGTGAERY 405

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSV-------DLQSNATERLTNTLFINISASYSPDS 313
            +   S++G+R +++ Q      ++ V       DL       LT       S    P  
Sbjct: 406 TSLAASADGRRLVLT-QASPKRTLWRVALGPDRADLAGARPIPLTTGTG--GSPRLGP-- 460

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +V+ S +   + L+ +  +G+  +  SQ        P     G  IAF    G +  +
Sbjct: 461 GYLVYVSAKGAGDGLWKL-QDGASTELWSQPGARIAGAPAVRRDGRRIAFWTREGGRTRL 519

Query: 374 GVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLI 431
            V+  DG+  R++ +      AP W P G SL      +G    +L+ + L  G    L+
Sbjct: 520 RVVDADGTGGRVVTDALQLSGAPAWMPDGASLAVGAIVNG--APRLFRVPLEGGAPAPLV 577

Query: 432 NTPAYASDPQWVG 444
             P  ++DP W  
Sbjct: 578 AEP--SADPAWSP 588



 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 80/235 (34%), Gaps = 13/235 (5%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
             +++VS       +        +DGA+    +    +I   P    + +++A+ T +  
Sbjct: 461 GYLVYVSAKGAGDGLWKL-----QDGASTELWSQPGARIAGAPAVRRDGRRIAFWTREGG 515

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                 +         + + +   +  AP +  +G    +    + A  ++ V L+  A 
Sbjct: 516 RTRLRVVDADGTGG--RVVTDALQLSGAPAWMPDGASLAVGAIVNGAPRLFRVPLEGGAP 573

Query: 295 ERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             L      +   ++SP      F  +D      L  + ++GS  +              
Sbjct: 574 APLVAEPSAD--PAWSPAGDLFAFTGADVGTTFPLKAVNADGSAHRMPPLTLTRGERHVA 631

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLI 405
           + P G  IA  +    +  +  +       R   +L  D +++    SP GR L+
Sbjct: 632 FLPGGRSIAVLRGEIRRKHLAAVDLASGASRPLIVLPPDFDVRDFDVSPDGRELV 686



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 72/212 (33%), Gaps = 26/212 (12%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISAS--- 308
           + +F  +  A   S +G+       +   +D++   + S     LT       ++ S   
Sbjct: 165 LTDFGGVEQAAAISGDGRFVAFLSDRAGRVDVWLTQVGSGQFLDLTRGSAPELVNPSIRT 224

Query: 309 --YSPDSSQIVF-ESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +SPD S + F    R G +     ++ +   G   +   +       +  W+  G  +
Sbjct: 225 LGFSPDGSLVTFWARGRTGSDPPDIGIWAVPLLGGPPRPYLEG----AAEYAWTRDGTRL 280

Query: 362 AFTKFSGEKFAIGVMKKDG-SQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                 G    + V +     + R L       +    TW+P  R + F +    D    
Sbjct: 281 V-HHTPGPGDPMYVSEAGRPHEGRRLFSAPAGLHAHFQTWAPDQRFVYFVQGALPDR-LD 338

Query: 418 LYSIDLNGR--NETLINTPAYASDPQWVGFMD 447
           L+ I  +G    E L +     S P    F+D
Sbjct: 339 LWRIRADGSSAPERLTHHDGVVSHPV---FVD 367



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 64/180 (35%), Gaps = 27/180 (15%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            L       LT+   +  +A+ S D   + F SDR G+  +++ Q        +++    
Sbjct: 156 PLAGARFVPLTDFGGVEQAAAISGDGRFVAFLSDRAGRVDVWLTQVGSGQFLDLTRGSAP 215

Query: 348 SYFDPV-----WSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              +P      +SP G L+ F     T        I  +   G   R  +E +   A  W
Sbjct: 216 ELVNPSIRTLGFSPDGSLVTFWARGRTGSDPPDIGIWAVPLLGGPPRPYLEGAAEYA--W 273

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRN---ETLINTPA--------YASDPQWVGFM 446
           +  G  L+      GD       +   GR      L + PA        +A D ++V F+
Sbjct: 274 TRDGTRLVHHTPGPGDPMY----VSEAGRPHEGRRLFSAPAGLHAHFQTWAPDQRFVYFV 329


>gi|220917293|ref|YP_002492597.1| WD40 domain protein beta Propeller [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955147|gb|ACL65531.1| WD40 domain protein beta Propeller [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 1077

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 76/210 (36%), Gaps = 27/210 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL-------------- 237
            L  +D      R LT    +   +P   P  + V Y  ++    +              
Sbjct: 414 DLWAVDLARGARRRLTDG--ERAGDPAVVPGGRAVVYVRHEPGGRMALVRRTLPPAPMVP 471

Query: 238 --------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                   R  L      +         + + AP  S +G+R    +Q+    D+     
Sbjct: 472 DDATLRERRAELAVPPPAQVEVLFARPGAQVFAPAPSPDGRRIAFELQEGGRRDLAL--W 529

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           + +   R+T+   ++   +++PD   ++F SDR G   LY  ++     ++++ + E   
Sbjct: 530 EDDEVRRITDDDALDTGPAWTPDGRYLLFASDRGGVYDLYAWEAATGAIRKVT-NVETGA 588

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           F P  SP G  I F  F  E + +  +  D
Sbjct: 589 FQPAVSPDGRTIGFVTFGREGYDVATIPFD 618



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 81/292 (27%), Gaps = 75/292 (25%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY---------------------- 240
           +          +  PR+SP+   +AY   D +     Y                      
Sbjct: 332 VPTRLTRAGGRVETPRWSPDGSFIAYQKRDLDRRPGTYRVTPGGADLGLALTVDVNGALS 391

Query: 241 -----------------------LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
                                  L    + R  +R          P     G+  +    
Sbjct: 392 MASPREAVVAIGEVWRLHRTYDDLWAVDLARGARRRLTDGERAGDPAVVPGGRAVVYVRH 451

Query: 278 KDEA----------MDIYSVDLQSNATER-------------LTNTLFINI-SASYSPDS 313
           +                   D  +    R             L       + + + SPD 
Sbjct: 452 EPGGRMALVRRTLPPAPMVPDDATLRERRAELAVPPPAQVEVLFARPGAQVFAPAPSPDG 511

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +I FE    G+  L + + +  + +RI+ D +A    P W+P G  + F    G  + +
Sbjct: 512 RRIAFELQEGGRRDLALWEDD--EVRRITDD-DALDTGPAWTPDGRYLLFASDRGGVYDL 568

Query: 374 GVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +      R +   ++    P  SP GR++ F     G  G  + +I  +
Sbjct: 569 YAWEAATGAIRKVTNVETGAFQPAVSPDGRTIGFVTF--GREGYDVATIPFD 618



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 4/107 (3%)

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERL-LVEDSNLQAP 395
             R+++        P WSP G  IA+ K     +     +   G+   L L  D N    
Sbjct: 333 PTRLTRAG-GRVETPRWSPDGSFIAYQKRDLDRRPGTYRVTPGGADLGLALTVDVNGALS 391

Query: 396 TWSPSGRSLIFSR-KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             SP    +      +   T   L+++DL       +     A DP 
Sbjct: 392 MASPREAVVAIGEVWRLHRTYDDLWAVDLARGARRRLTDGERAGDPA 438


>gi|56459151|ref|YP_154432.1| acylaminoacyl-peptidase [Idiomarina loihiensis L2TR]
 gi|56178161|gb|AAV80883.1| Acylaminoacyl-peptidase [Idiomarina loihiensis L2TR]
          Length = 679

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 103/288 (35%), Gaps = 62/288 (21%)

Query: 218 RFSPNQQKVAYATYDDEDI-----LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+ + +AY     +D+       ++L+DT   +    I + +    +  +S++G R 
Sbjct: 42  SISPDGKYIAYIRNSFDDMKDNTRRSLWLIDTETGQHL-PIFDDKFNYGSLAWSNDGTRL 100

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------------- 319
             +  + E   I+   ++   T ++T+      S S+S D +Q+ F              
Sbjct: 101 AFASNRSEKNQIHVHWIKEQRTAKVTHVSESPGSISWSNDDTQLAFTLSVKAEATPFAKS 160

Query: 320 ------------SD-----------REGKE-------QLYVMQSNGSDQKRISQDKEASY 349
                       SD           R+G         Q++V+ + G   ++++       
Sbjct: 161 VKKPTKPKGAKWSDSPIIVQEAYYQRDGTGVLEPAHTQIFVVPAEGGSARQLTDGPYRHG 220

Query: 350 FDPVWSPQGDLIAFTKFSGEKF-------AIGVMKKDGSQERLLVE-DSNLQAPTWSPSG 401
               W+     I F+    E +        +  +  D  +   + +      +P +SP+G
Sbjct: 221 GPLAWTADNKHIVFSGNRSEDWAYQVNESDLYNVSLDSKEVTQVTDKPGRESSPQFSPNG 280

Query: 402 RSLIFSRKKDGD---TGSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
             L +    +       S+L+ +D + R+E  +        S PQW G
Sbjct: 281 EHLAYLHSSNEPVPYHKSQLWIMDWSERSEAELQADFDRSFSSPQWTG 328


>gi|163786118|ref|ZP_02180566.1| putative exported tricorn protease [Flavobacteriales bacterium
           ALC-1]
 gi|159877978|gb|EDP72034.1| putative exported tricorn protease [Flavobacteriales bacterium
           ALC-1]
          Length = 1052

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 88/240 (36%), Gaps = 23/240 (9%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +P  SP+   + ++   D D+ +V    +       R+   +     PR S +GK    S
Sbjct: 29  DPTLSPDGNTIVFSY--DGDLWKV----STSGGEASRLTAMKGEETLPRISPDGKWIAFS 82

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +    D+Y + +     ++LT     +   S+S DS QI F S R  +   Y +  +G
Sbjct: 83  ATQYGNRDVYIMPMVGGEIKQLTFHDTADDVDSWSWDSKQIHFTSSRYNRYTGYTVAIDG 142

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKF------------AIGVMKKDGSQ 382
           +  KR+ +    +  + +  P+ D I F   +  + F             I         
Sbjct: 143 ATPKRLFEHYFNNVHNIMEHPKTDEIFFNESWESKNFTHRKRYKGDYNPDIKSYNPKNKI 202

Query: 383 ERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            +   + +      T   +G  +++    + +    LY+ D N    TL    +    PQ
Sbjct: 203 YKEYTDYNGKDMWVTIDQNG--IVYFASDEVNGEYNLYTFD-NSNKTTLTKFKSSIGRPQ 259



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 48/135 (35%), Gaps = 5/135 (3%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + P  S +G   + S   D    ++ V        RLT           SPD   I F 
Sbjct: 27  QIDPTLSPDGNTIVFSYDGD----LWKVSTSGGEASRLTAMKGEETLPRISPDGKWIAFS 82

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           + + G   +Y+M   G + K+++    A   D  WS     I FT     ++    +  D
Sbjct: 83  ATQYGNRDVYIMPMVGGEIKQLTFHDTADDVD-SWSWDSKQIHFTSSRYNRYTGYTVAID 141

Query: 380 GSQERLLVEDSNLQA 394
           G+  + L E      
Sbjct: 142 GATPKRLFEHYFNNV 156



 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 82/215 (38%), Gaps = 18/215 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +K+A+ +  +     +++ D +     K   N    +L  ++  + +  L +   +
Sbjct: 316 SPDNKKMAFVSRGE-----LFVSDVKGKFVKKINTNSSERVLEVKWLKDNRTLLFNQTAN 370

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              ++YS+        +RLT+    N++ +  P      + S   G+ +L ++  +    
Sbjct: 371 GYSNLYSISADGKGGEKRLTDETQNNVNITLDPKLENAAYVS---GRNELRMINLSNFKS 427

Query: 339 KRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAP 395
             +  ++    + P   +SP G+ I +  +   +  I        +   L     +   P
Sbjct: 428 TTVVTEEFWDLYPPSPNFSPDGNYIVYNAYRNFELDIFTYHIPTKKVLNLTNTGVSENNP 487

Query: 396 TWSPSGRSLIFSRK------KDGDTGSKLYSIDLN 424
            WS  G+ + F           G   + +Y + L+
Sbjct: 488 IWSKDGKYIYFDSDLTQPNFPRGGGNNHIYRMALD 522



 Score = 90.8 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 55/134 (41%), Gaps = 8/134 (5%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              +  I  + SPD + IVF  D +    L+ + ++G +  R++  K      P  SP G
Sbjct: 22  QDTYFQIDPTLSPDGNTIVFSYDGD----LWKVSTSGGEASRLTAMK-GEETLPRISPDG 76

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             IAF+        + +M   G + + L   D+     +WS   + + F+  +       
Sbjct: 77  KWIAFSATQYGNRDVYIMPMVGGEIKQLTFHDTADDVDSWSWDSKQIHFTSSRYNRYTG- 135

Query: 418 LYSIDLNGRNETLI 431
            Y++ ++G     +
Sbjct: 136 -YTVAIDGATPKRL 148



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 68/186 (36%), Gaps = 17/186 (9%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           + +   K   ++R L  +++       ++L  +  DG           Q        P  
Sbjct: 349 ERVLEVKWLKDNRTLLFNQTANG---YSNLYSISADGKGGEKRLTDETQNNVNITLDPKL 405

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALISVQKDEA 281
           +  AY +  +E    + +++    ++   +    +     +P FS +G   + +  ++  
Sbjct: 406 ENAAYVSGRNE----LRMINLSNFKSTTVVTEEFWDLYPPSPNFSPDGNYIVYNAYRNFE 461

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--------REGKEQLYVMQS 333
           +DI++  + +     LTNT     +  +S D   I F+SD          G   +Y M  
Sbjct: 462 LDIFTYHIPTKKVLNLTNTGVSENNPIWSKDGKYIYFDSDLTQPNFPRGGGNNHIYRMAL 521

Query: 334 NGSDQK 339
           +  +  
Sbjct: 522 DRYEAP 527



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 99/298 (33%), Gaps = 48/298 (16%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H  +DD+      +   ++S+ +  + S  +   + +   +  DGA  + L       + 
Sbjct: 107 HDTADDV------DSWSWDSKQIHFTSSRYN---RYTGYTVAIDGATPKRLFEHYFNNVH 157

Query: 216 EPRFSPNQQKVAYATYDDEDILRV-------YLMDTRIDRAPKRI----GNFRSMILAPR 264
                P   ++ +    +             Y  D +      +I     ++    +   
Sbjct: 158 NIMEHPKTDEIFFNESWESKNFTHRKRYKGDYNPDIKSYNPKNKIYKEYTDYNGKDMWVT 217

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
              NG     S + +   ++Y+ D  ++    LT           S +  ++VF  D   
Sbjct: 218 IDQNGIVYFASDEVNGEYNLYTFD--NSNKTTLTKFKSSIGRPQVSANGQKVVFIKD--- 272

Query: 325 KEQLYVMQSNGSDQKRIS--------------QDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             Q+++        K+++                 + +      SP    +AF       
Sbjct: 273 -YQIFIYDVASKKTKKVAITIHTNNTLAKSQDFKVKGNITYFDVSPDNKKMAFVSRG--- 328

Query: 371 FAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             + V    G   + +  +S+ +     W    R+L+F++  +G   S LYSI  +G+
Sbjct: 329 -ELFVSDVKGKFVKKINTNSSERVLEVKWLKDNRTLLFNQTANG--YSNLYSISADGK 383



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 13/65 (20%)

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-------NTPAYASDP 440
           +      PT SP G +++FS   DGD    L+ +  +G   + +         P  + D 
Sbjct: 23  DTYFQIDPTLSPDGNTIVFS--YDGD----LWKVSTSGGEASRLTAMKGEETLPRISPDG 76

Query: 441 QWVGF 445
           +W+ F
Sbjct: 77  KWIAF 81


>gi|311744879|ref|ZP_07718664.1| C- processing peptidase subfamily [Algoriphagus sp. PR1]
 gi|126577381|gb|EAZ81601.1| C- processing peptidase subfamily [Algoriphagus sp. PR1]
          Length = 1041

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 92/263 (34%), Gaps = 25/263 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V+    AN + +         EP  +P+   + ++   + D+ +V +          R
Sbjct: 9   LLVLSVFFANAQTM--ESPYFASEPTLTPDGDVIIFSY--EGDLWKVPV----SGGPAAR 60

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I         P  S +GK    + ++    D++ + L     ++LT     +   S+S D
Sbjct: 61  ITAMEGEETKPAVSPDGKWLAFTAEQYGNKDVFIMPLNGGEIQQLTFHEATDEVESWSWD 120

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKF 371
           SS I F S R      + +Q  G+  KR+      +  + V SP    I F   +  ++F
Sbjct: 121 SSTIYFTSSRYNSYTTFEIQITGATPKRLFPHYFNTVHNTVISPTTGEIFFNESWESKRF 180

Query: 372 ------------AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                        I          +   + +      T   +G+ + F    + +    L
Sbjct: 181 ANRKRYKGEYNPDIKSYDPSSKAYKQYTDYEGKDFGATIDQNGK-VYFMSD-EANGEYNL 238

Query: 419 YSIDLNGRNETLINTPAYASDPQ 441
           Y+ +       L + P+    P+
Sbjct: 239 YTFEGE-EKTQLTDFPSSILWPK 260



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 98/264 (37%), Gaps = 18/264 (6%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           K  F          V +G        + ++    + ++      +     SP+ +K+A+ 
Sbjct: 267 KVVFQKDYQIHVYDVATGQTSKPQFSLYQNQTLGKDISREVAGNVSYFDVSPDGKKMAFV 326

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +        +++ D +     K     +  +   ++ ++ K  + +       +++++  
Sbjct: 327 SRGV-----LFISDIKGKFIKKIPTEAKEAVEEVKWLADNKTLIYTRTVKGYHNLFTISA 381

Query: 290 QS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           ++    ++LT     N +   + D +  V+ S   G+ ++  +     +   + +D+   
Sbjct: 382 ENPGEEKQLTEDKDKNRNLVLNGDRTLGVYMS---GRNEVREINLETLESSTLVEDELWG 438

Query: 349 YF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLI 405
            +  +P +SP    I F+     +  + +  +   +   L +    +  P WSP G+ + 
Sbjct: 439 LYTPNPYFSPDDQYIVFSPIRNFEREVMIYHRPSKKTINLTKTLVTETNPVWSPDGKYIY 498

Query: 406 FSRKKD------GDTGSKLYSIDL 423
           F   +       G T + +Y + L
Sbjct: 499 FVTDRTNPSYPYGTTDAHIYRMKL 522



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 101/303 (33%), Gaps = 46/303 (15%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H  +D++      E   ++S  ++ + S  +      + +    GA  + L P     + 
Sbjct: 108 HEATDEV------ESWSWDSSTIYFTSSRYNSYTTFEIQIT---GATPKRLFPHYFNTVH 158

Query: 216 EPRFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPK----------RIGNFRSMILAPR 264
               SP   ++ +  +++ +            +   K          +  ++        
Sbjct: 159 NTVISPTTGEIFFNESWESKRFANRKRYKGEYNPDIKSYDPSSKAYKQYTDYEGKDFGAT 218

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
              NGK   +S + +   ++Y+   +     +LT+     +    S + +++VF+ D   
Sbjct: 219 IDQNGKVYFMSDEANGEYNLYTF--EGEEKTQLTDFPSSILWPKVSANGAKVVFQKD--- 273

Query: 325 KEQLYVMQSNGSDQ--------------KRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             Q++V                      K IS++   +      SP G  +AF       
Sbjct: 274 -YQIHVYDVATGQTSKPQFSLYQNQTLGKDISREVAGNVSYFDVSPDGKKMAFVSRG--- 329

Query: 371 FAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             + +    G   + +  ++   ++   W    ++LI++R   G       S +  G  +
Sbjct: 330 -VLFISDIKGKFIKKIPTEAKEAVEEVKWLADNKTLIYTRTVKGYHNLFTISAENPGEEK 388

Query: 429 TLI 431
            L 
Sbjct: 389 QLT 391



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 118/319 (36%), Gaps = 49/319 (15%)

Query: 159 SDDIYQSITGEKG-------DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           S   Y+  T  +G       D N ++ F+S+       + +L   +  G     LT    
Sbjct: 200 SSKAYKQYTDYEGKDFGATIDQNGKVYFMSDEANG---EYNLYTFE--GEEKTQLTDFPS 254

Query: 212 QILFEPRFSPNQQKVAY------------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            I   P+ S N  KV +                 +    +Y   T      + +      
Sbjct: 255 SI-LWPKVSANGAKVVFQKDYQIHVYDVATGQTSKPQFSLYQNQTLGKDISREVA---GN 310

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVF 318
           +     S +GK+     +      ++  D++    +++ T          +  D+  +++
Sbjct: 311 VSYFDVSPDGKKMAFVSRG----VLFISDIKGKFIKKIPTEAKEAVEEVKWLADNKTLIY 366

Query: 319 ESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
               +G   L+ + + N  ++K++++DK+ +  + V +    L  +     E   I +  
Sbjct: 367 TRTVKGYHNLFTISAENPGEEKQLTEDKDKN-RNLVLNGDRTLGVYMSGRNEVREINLET 425

Query: 378 KDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRKKDGDTGSKLY------SIDLNGRN 427
            + S    LVED         P +SP  + ++FS  ++ +    +Y      +I+L    
Sbjct: 426 LESS---TLVEDELWGLYTPNPYFSPDDQYIVFSPIRNFEREVMIYHRPSKKTINLTKTL 482

Query: 428 ETLINTPAYASDPQWVGFM 446
            T  N P ++ D +++ F+
Sbjct: 483 VTETN-PVWSPDGKYIYFV 500



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 19/68 (27%)

Query: 391 NLQAPTWS------PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYA 437
            +++P ++      P G  +IFS +        L+ + ++G     I         PA +
Sbjct: 21  TMESPYFASEPTLTPDGDVIIFSYE------GDLWKVPVSGGPAARITAMEGEETKPAVS 74

Query: 438 SDPQWVGF 445
            D +W+ F
Sbjct: 75  PDGKWLAF 82


>gi|225874088|ref|YP_002755547.1| TolB domain protein [Acidobacterium capsulatum ATCC 51196]
 gi|225794563|gb|ACO34653.1| TolB domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 555

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 50/308 (16%), Positives = 108/308 (35%), Gaps = 60/308 (19%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPK 251
           L +   +G++++    S     F  R+SP+ +++ +   + E    R++ +    + A  
Sbjct: 138 LYIAQLNGSDVQ-KFASLPGRAFWLRWSPDGKELRFTLLNSETHSSRLWSIRANGNDAHL 196

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN------ATERLTNTLFINI 305
            + +         ++++G+  +      E  +I+ +  +S           LTN      
Sbjct: 197 LLADDDGSECCGSWTADGRDYVFQKNASEGSNIWVLPSRSGWFWRNRQPYPLTNGPLNYQ 256

Query: 306 SA-------------------------------------------SYSPDSSQIVFESDR 322
           S                                            ++S D   + +    
Sbjct: 257 SPITDTTGRRVFFIGLNLRSELLQYDASSQLFIPYAGGISNASRVAFSRDGEWVAWFRQD 316

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-GDLIAFTKFSGEKFAIGVMKKDGS 381
           +G   L+  + NG+++ ++S       F   WSP    LI   +  G+++ I  +  DG 
Sbjct: 317 DGS--LWRSRRNGTERLQLSS-GPLDVFMMQWSPDDKKLILMAREPGKRWTIYTLDADGG 373

Query: 382 QERLLV-EDSNLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLINTPAY 436
             R++  E+ +   P WSP G+ ++F R  D          +Y  DL   + + +     
Sbjct: 374 PLRVVYPENRSQADPNWSPDGKQIVFGRLPDLMAEASMPKAIYIYDLASHHLSKLPGSEG 433

Query: 437 ASDPQWVG 444
              P+W  
Sbjct: 434 LFSPRWSP 441



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 94/312 (30%), Gaps = 64/312 (20%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S    + L  +  +G +   L    D       ++ + +   +     E    ++++ +R
Sbjct: 177 SETHSSRLWSIRANGNDAHLLLADDDGSECCGSWTADGRDYVFQKNASEGS-NIWVLPSR 235

Query: 246 ID-----RAPKRIGNFRSMILAP------------------------------------- 263
                  R P  + N      +P                                     
Sbjct: 236 SGWFWRNRQPYPLTNGPLNYQSPITDTTGRRVFFIGLNLRSELLQYDASSQLFIPYAGGI 295

Query: 264 ------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                  FS +G+      Q D +  ++          +L++         +SPD  +++
Sbjct: 296 SNASRVAFSRDGEWVAWFRQDDGS--LWRSRRNGTERLQLSSGPLDVFMMQWSPDDKKLI 353

Query: 318 FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EK 370
             +   GK   +Y + ++G    R+   +  S  DP WSP G  I F +           
Sbjct: 354 LMAREPGKRWTIYTLDADGGPL-RVVYPENRSQADPNWSPDGKQIVFGRLPDLMAEASMP 412

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            AI +          L     L +P WSP GR +           ++L   DL       
Sbjct: 413 KAIYIYDLASHHLSKLPGSEGLFSPRWSPDGRYIAALSIDQ----TRLMLYDLKTHLWKT 468

Query: 431 INTPAYASDPQW 442
           +   +  +DP W
Sbjct: 469 LAQQS-VADPAW 479



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 101/339 (29%), Gaps = 67/339 (19%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           SD +++S      D  SR+ F        ++  +L     DG       P      +   
Sbjct: 23  SDPLFESFGPTATDG-SRLYFPEIEEGRAVLAQALI---ADGETSTIPLPQEIAAPYISD 78

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S +   +    +      +   +   I    +++    +      +  +G+R L +   
Sbjct: 79  ISRDGSSLLLRDHLAARAEQPLWIVPTIGGGARQVPGILAHD--ATWMPDGQRILYAS-- 134

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGS 336
               ++Y   L  +  ++  +         +SPD  ++ F   +      +L+ +++NG+
Sbjct: 135 --GDNLYIAQLNGSDVQKFASLPGRAFWLRWSPDGKELRFTLLNSETHSSRLWSIRANGN 192

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK------------------- 377
           D   +  D + S     W+  G    F K + E   I V+                    
Sbjct: 193 DAHLLLADDDGSECCGSWTADGRDYVFQKNASEGSNIWVLPSRSGWFWRNRQPYPLTNGP 252

Query: 378 -------KDGSQERLLVED------------------------SNLQAPTWSPSGRSLIF 406
                   D +  R+                            SN     +S  G  + +
Sbjct: 253 LNYQSPITDTTGRRVFFIGLNLRSELLQYDASSQLFIPYAGGISNASRVAFSRDGEWVAW 312

Query: 407 SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            R+ DG     L+    NG     L + P      QW  
Sbjct: 313 FRQDDG----SLWRSRRNGTERLQLSSGPLDVFMMQWSP 347



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 52/156 (33%), Gaps = 48/156 (30%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-----DDEDILRVYLMD 243
            + ++  +D DG  +R + P  ++   +P +SP+ +++ +        +      +Y+ D
Sbjct: 361 KRWTIYTLDADGGPLRVVYP-ENRSQADPNWSPDGKQIVFGRLPDLMAEASMPKAIYIYD 419

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRAL------------------------------ 273
                  K  G+    + +PR+S +G+                                 
Sbjct: 420 LASHHLSKLPGSEG--LFSPRWSPDGRYIAALSIDQTRLMLYDLKTHLWKTLAQQSVADP 477

Query: 274 ----------ISVQKDEAMDIYSVDLQSNATERLTN 299
                               +Y VD+++ A +++ +
Sbjct: 478 AWAHGAPAIYFHDFVQPGQPLYRVDVKAGAIQKIAD 513


>gi|254414742|ref|ZP_05028507.1| hypothetical protein MC7420_3763 [Microcoleus chthonoplastes PCC
            7420]
 gi|196178590|gb|EDX73589.1| hypothetical protein MC7420_3763 [Microcoleus chthonoplastes PCC
            7420]
          Length = 1372

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 95/241 (39%), Gaps = 16/241 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ S  +  ++ + +RD A         +  +    FSP+ Q +A A+ D    +R++ 
Sbjct: 993  QTIASASLDQTVRLWNRDNAIPELTLKGHEDQVNSVSFSPDGQTIASASLD--QTIRLWN 1050

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                  +  K +    + +    FS +GK    S   D+ + ++SVD        LT   
Sbjct: 1051 FG---GKQLKTLKGHTNTVNHVSFSPDGKTIA-STSADKTIKLWSVD--GRQLNTLTGHS 1104

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +  S  +S D   +   S     + + +   +G     ++           +SP    I
Sbjct: 1105 DLVRSVVWSLDGQTLASAS---ADKTIKLWSVDGRQLNTLT-GHSDLVRSLSFSPDSKTI 1160

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            A T +  +   +    K   Q  L   ++++ + ++SP G+ L  +     D   KL+S+
Sbjct: 1161 ASTSWD-KTVRLWNRDKAILQLTLTGHNNDVNSVSFSPDGKMLASASD---DKTIKLWSV 1216

Query: 422  D 422
            +
Sbjct: 1217 N 1217



 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 101/241 (41%), Gaps = 18/241 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ S  +  ++ + +  G  ++ L    + +     FSP+ + +A  + D    ++++ 
Sbjct: 1035 QTIASASLDQTIRLWNFGGKQLKTLKGHTNTVNHV-SFSPDGKTIASTSAD--KTIKLWS 1091

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +D    R    +     ++ +  +S +G+    S   D+ + ++SVD        LT   
Sbjct: 1092 VD---GRQLNTLTGHSDLVRSVVWSLDGQTLA-SASADKTIKLWSVD--GRQLNTLTGHS 1145

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +  S S+SPDS  I   S     + + +   + +  +              +SP G ++
Sbjct: 1146 DLVRSLSFSPDSKTIASTS---WDKTVRLWNRDKAILQLTLTGHNNDVNSVSFSPDGKML 1202

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            A          I +   +G +   L ++  + + ++SPSG+++        DT  KL+S+
Sbjct: 1203 ASASDDKT---IKLWSVNGKELNSLQDNDKVYSISFSPSGQTIA---SAGEDTTVKLWSV 1256

Query: 422  D 422
            D
Sbjct: 1257 D 1257



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 58/289 (20%), Positives = 111/289 (38%), Gaps = 26/289 (8%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D + ++I   K     R++ V     + ++     V+ + G   R         ++  RF
Sbjct: 724 DALIEAIRAGKSLQERRVIPVQPETRNHVLTALQQVVYQYGFRERNRLVGHKYGVWGVRF 783

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + VA A+ D      V L            G+ R +  +  +S NG+    +   D
Sbjct: 784 SPDSKMVASASGDR----TVKLWSLDGRELATLNGHNRQVN-SVAWSPNGQTIA-TASND 837

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +   ++S+D        L        S  +SPD   +   S+    E + +   +G   K
Sbjct: 838 QTAKLWSLD--GKELATLNGHNHQVKSIDWSPDGQFLATASE---DETVRLWSRDGKLLK 892

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWS 398
              Q    + +   +SP G  IA          + +  +DG   +     +N + + ++S
Sbjct: 893 TF-QGHNNAVYSVSFSPDGQTIASASEDET---VRLWSRDGKLLKTFQGHNNAVYSVSFS 948

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDL------NGRNETLINTPAYASDPQ 441
           P G+++       GD   KL+S D        G N+  +N+ +++ D Q
Sbjct: 949 PDGQTIA---SASGDNTVKLWSRDGKVLKTFKGHNQ-PVNSVSFSPDGQ 993



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 46/264 (17%), Positives = 95/264 (35%), Gaps = 19/264 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ S    N++ +  RDG  ++      +Q +    FSP+ Q +A A+ D      V L
Sbjct: 952  QTIASASGDNTVKLWSRDGKVLKT-FKGHNQPVNSVSFSPDGQTIASASLDQ----TVRL 1006

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +         +      + +  FS +G+    S   D+ + ++  +      + L    
Sbjct: 1007 WNRDNAIPELTLKGHEDQVNSVSFSPDGQTIA-SASLDQTIRLW--NFGGKQLKTLKGHT 1063

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  S+SPD   I   S     + + +   +G     ++          VWS  G  +
Sbjct: 1064 NTVNHVSFSPDGKTIASTS---ADKTIKLWSVDGRQLNTLT-GHSDLVRSVVWSLDGQTL 1119

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A          I +   DG Q   L   S+ +++ ++SP  +++  +     D   +L++
Sbjct: 1120 ASASADKT---IKLWSVDGRQLNTLTGHSDLVRSLSFSPDSKTIASTSW---DKTVRLWN 1173

Query: 421  IDLNGRNETLINTPAYASDPQWVG 444
             D      TL       +   +  
Sbjct: 1174 RDKAILQLTLTGHNNDVNSVSFSP 1197



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 65/377 (17%), Positives = 134/377 (35%), Gaps = 48/377 (12%)

Query: 80   NLISQDSFKQKITNPDSIPRFQDWNSLGA--QVLVTG------RVIKEGKDRLRVE---- 127
            N +S     Q I +       + WN   A  ++ + G       V      +        
Sbjct: 984  NSVSFSPDGQTIASASLDQTVRLWNRDNAIPELTLKGHEDQVNSVSFSPDGQTIASASLD 1043

Query: 128  --FRLWDVKDRKQIIGKKFFSSPA------SWRKIAHTISDDIYQ----------SITGE 169
               RLW+   ++    K   ++          + IA T +D   +          ++TG 
Sbjct: 1044 QTIRLWNFGGKQLKTLKGHTNTVNHVSFSPDGKTIASTSADKTIKLWSVDGRQLNTLTGH 1103

Query: 170  KGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                 S +  +  +++ S     ++ +   DG  +  LT   D +     FSP+ + +A 
Sbjct: 1104 SDLVRSVVWSLDGQTLASASADKTIKLWSVDGRQLNTLTGHSDLVRSL-SFSPDSKTIAS 1162

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             ++D    +R++  D  I +    +    + + +  FS +GK    S   D+ + ++SV+
Sbjct: 1163 TSWD--KTVRLWNRDKAILQLT--LTGHNNDVNSVSFSPDGKMLA-SASDDKTIKLWSVN 1217

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                    L        S S+SP    I       G++    + S    + +I +     
Sbjct: 1218 --GKELNSL-QDNDKVYSISFSPSGQTIA----SAGEDTTVKLWSVDHKRAKIIKGHSKP 1270

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS 407
             +D  +SP G+ IA   +      + +  K G   + L    + + +  +SP  + L  +
Sbjct: 1271 VYDVSFSPDGETIASGSWDKT---VKLWNKKGQIMQTLEGHTNLVFSVAFSPDDKMLASA 1327

Query: 408  RKKDGDTGSKLYSIDLN 424
               +      L  + L+
Sbjct: 1328 SADNTVILWNLEDLTLD 1344



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 87/274 (31%), Gaps = 50/274 (18%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----------- 234
            +     ++ +  RDG  ++      +  ++   FSP+ Q +A A+ D+            
Sbjct: 874  TASEDETVRLWSRDGKLLKT-FQGHNNAVYSVSFSPDGQTIASASEDETVRLWSRDGKLL 932

Query: 235  ---DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                     +         + I +         +S +GK  ++   K     + SV    
Sbjct: 933  KTFQGHNNAVYSVSFSPDGQTIASASGDNTVKLWSRDGK--VLKTFKGHNQPVNSV---- 986

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                            S+SPD   I   S     + + +   + +  +   +  E     
Sbjct: 987  ----------------SFSPDGQTIASASL---DQTVRLWNRDNAIPELTLKGHEDQVNS 1027

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKK 410
              +SP G  IA          I +    G Q + L    + +   ++SP G+++      
Sbjct: 1028 VSFSPDGQTIASASLDQT---IRLWNFGGKQLKTLKGHTNTVNHVSFSPDGKTIA---ST 1081

Query: 411  DGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWV 443
              D   KL+S+D  GR   TL           W 
Sbjct: 1082 SADKTIKLWSVD--GRQLNTLTGHSDLVRSVVWS 1113


>gi|254881548|ref|ZP_05254258.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319642932|ref|ZP_07997568.1| exported peptidase [Bacteroides sp. 3_1_40A]
 gi|254834341|gb|EET14650.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317385480|gb|EFV66423.1| exported peptidase [Bacteroides sp. 3_1_40A]
          Length = 1086

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 113/304 (37%), Gaps = 38/304 (12%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  +  ++ EKG FN     + +  + G     +   +     +R+L+ + +  L    +
Sbjct: 228 DKSFYYLSEEKGSFN-----IFKRDIDGNTSKQI--TNHTKHPVRFLSAASNGTLC---Y 277

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
             + +            +++ ++  + D+   R             S + K     ++ D
Sbjct: 278 GYDGEIYTVKEGAIPQKVQISIVTDKNDKDLIRQIKRNGATEI-SLSPDAKEIAFVLRGD 336

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               +Y    + + T+++TNT        +SPD   IV+ S+R G  Q+Y       ++K
Sbjct: 337 ----VYVTSTEYSTTKQITNTPQQERDIHFSPDGRSIVYASERNGLWQIYQTSLAKKEEK 392

Query: 340 RISQ----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           + +           + + + F P +SP G  +AF +       I V+       R +++ 
Sbjct: 393 QFAYATDIKEERLTNSDITSFQPQYSPDGKEVAFLENRTT---IRVLNLKSKAVRTVMDG 449

Query: 390 SNLQAPT-------WSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASD 439
               + +       WSP  + ++ +    G   +K   L +   NG    L  +     +
Sbjct: 450 KYEYSYSDGDQWYQWSPDSKWILTNYIGIGGWNNKDVALVNASGNGEIHNLTESGYSDGN 509

Query: 440 PQWV 443
            +WV
Sbjct: 510 AKWV 513



 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 66/202 (32%), Gaps = 30/202 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    IY+V        ++T     +    +SPD  +I F SDR 
Sbjct: 30  AISPDGTTIAFTYKGD----IYTVPSTGGRASQITTNPAHDTKPIWSPDGKKIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF-A 372
           G   ++ +   G   KR++         PV       I F           +F   +F  
Sbjct: 86  GSMDIFEVNKEGGIPKRLTTHSGNE--TPVAYKDAGHILFLANIMPTAEDAQFPSGQFQQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF----------SRKKDGDTGSKLYSID 422
           +  +  +G +  +L     ++  + + +G +L++           +         ++   
Sbjct: 144 VYEVNTEGGRP-ILFSSMPMEDISINHTGNTLLYHDKKGYEDPWRKHHTSSITRDIWLCS 202

Query: 423 LNG--RNETLINTPAYASDPQW 442
           LNG                P W
Sbjct: 203 LNGNRTFRKQTAFNGEDRTPVW 224



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 84/240 (35%), Gaps = 37/240 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V            +I    +    P +S +GK+   +  
Sbjct: 30  AISPDGTTIAFTY--KGDIYTV----PSTGGRASQITTNPAHDTKPIWSPDGKKIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------REGK-E 326
           +  +MDI+ V+ +    +RLT         +Y  D+  I+F ++            G+ +
Sbjct: 84  RMGSMDIFEVNKEGGIPKRLTTHSGNETPVAY-KDAGHILFLANIMPTAEDAQFPSGQFQ 142

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIG 374
           Q+Y + + G      S        D   +  G+ + +               S     I 
Sbjct: 143 QVYEVNTEGGRPILFSSMP---MEDISINHTGNTLLYHDKKGYEDPWRKHHTSSITRDIW 199

Query: 375 VMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +   +G++   +    +   + P W+   +S  +  ++ G     ++  D++G     I 
Sbjct: 200 LCSLNGNRTFRKQTAFNGEDRTPVWASDDKSFYYLSEEKGSF--NIFKRDIDGNTSKQIT 257



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSG 401
           QD          SP G  IAFT        I  +   G +  ++    ++   P WSP G
Sbjct: 20  QDNPLWMRYCAISPDGTTIAFTYKGD----IYTVPSTGGRASQITTNPAHDTKPIWSPDG 75

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + + F+  + G     ++ ++  G     + T +    P
Sbjct: 76  KKIAFASDRMGSM--DIFEVNKEGGIPKRLTTHSGNETP 112



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 70/231 (30%), Gaps = 73/231 (31%)

Query: 281 AMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             DI+   L  N T R  T     + +  ++ D     + S+ +G   ++    +G+  K
Sbjct: 195 TRDIWLCSLNGNRTFRKQTAFNGEDRTPVWASDDKSFYYLSEEKGSFNIFKRDIDGNTSK 254

Query: 340 RIS-----------------------------------------------------QDKE 346
           +I+                                                     Q K 
Sbjct: 255 QITNHTKHPVRFLSAASNGTLCYGYDGEIYTVKEGAIPQKVQISIVTDKNDKDLIRQIKR 314

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLI 405
               +   SP    IAF         + V   + S  + +      +    +SP GRS++
Sbjct: 315 NGATEISLSPDAKEIAFVLRGD----VYVTSTEYSTTKQITNTPQQERDIHFSPDGRSIV 370

Query: 406 FSRKKDGDTGSKLYSIDL------------NGRNETLINTPAYASDPQWVG 444
           ++ +++G    ++Y   L            + + E L N+   +  PQ+  
Sbjct: 371 YASERNGLW--QIYQTSLAKKEEKQFAYATDIKEERLTNSDITSFQPQYSP 419



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 77/234 (32%), Gaps = 29/234 (12%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    + ++   K  +  +   G     +T +      +P +SP+ +K+A+A+      +
Sbjct: 31  ISPDGTTIAFTYKGDIYTVPSTGGRASQITTNPAH-DTKPIWSPDGKKIAFASDRMGS-M 88

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----------VQKDEAMDIYSV 287
            ++ ++ +    PKR+           +   G    ++              +   +Y V
Sbjct: 89  DIFEVN-KEGGIPKRLTTHSGNETPVAYKDAGHILFLANIMPTAEDAQFPSGQFQQVYEV 147

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSN 334
           + +       ++    +IS   +   + +++  D++G                +++   N
Sbjct: 148 NTEGGRPILFSSMPMEDIS--INHTGNTLLYH-DKKGYEDPWRKHHTSSITRDIWLCSLN 204

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           G+   R           PVW+       +       F I     DG+  + +  
Sbjct: 205 GNRTFRKQTAFNGEDRTPVWASDDKSFYYLSEEKGSFNIFKRDIDGNTSKQITN 258



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 63/154 (40%), Gaps = 16/154 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F+P++SP+ ++VA+        +L +     R     K   ++       ++
Sbjct: 405 LTNSDITSFQPQYSPDGKEVAFLENRTTIRVLNLKSKAVRTVMDGKYEYSYSDGDQWYQW 464

Query: 266 SSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K  L +          D+  V+         LT + + + +A +  D   +++ESD
Sbjct: 465 SPDSKWILTNYIGIGGWNNKDVALVNASGNGEIHNLTESGYSDGNAKWVLDGKAMIWESD 524

Query: 322 REG---------KEQLYVM--QSNGSDQKRISQD 344
           R G         +  +Y+M    +  D+ R+S++
Sbjct: 525 RAGFRSHGSWGAEADIYIMFFDLDAYDRFRMSKE 558



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 13/64 (20%)

Query: 388 EDSNLQAPTW------SPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASDP 440
                  P W      SP G ++ F+ K        +Y++    GR   +   PA+ + P
Sbjct: 16  STYAQDNPLWMRYCAISPDGTTIAFTYK------GDIYTVPSTGGRASQITTNPAHDTKP 69

Query: 441 QWVG 444
            W  
Sbjct: 70  IWSP 73


>gi|17228160|ref|NP_484708.1| WD-40 repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17130010|dbj|BAB72622.1| WD-40 repeat protein [Nostoc sp. PCC 7120]
          Length = 934

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 106/285 (37%), Gaps = 32/285 (11%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+++  +    G       +++ +      K  L  +  D              + +  F
Sbjct: 615 DEVFDLVFSPNGK------YIATASWDKTAK--LWSIVGDKLQELRTFNGHQGRVNKLSF 666

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +A  ++D     +++ +D       K +   +  + +  FS +G+    +  +D
Sbjct: 667 SPDGKYIATTSWD--KTAKLWNLD---GTLQKTLTGHKDTVWSVNFSPDGQLIA-TASED 720

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + + ++  +      + L     +  SA +SPD   I         + + +   +G  QK
Sbjct: 721 KTVKLW--NRDGELLKTLPRQSSVVNSAVFSPDGKLIA---TAGWDKTVKIWSIDGRLQK 775

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWS 398
            ++           +SP G LIA   +      + +   DG + R L    N+    T+S
Sbjct: 776 TLTGHTSG-INSVTFSPDGKLIASASWDNT---VKIWNLDGKELRTLRGHKNVVHNVTFS 831

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           P G+ +  +    GD   K+++I+     + L     Y  D  W 
Sbjct: 832 PDGKLIATAS---GDNTVKIWNING----QELRTLRGY-KDAVWS 868



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 94/225 (41%), Gaps = 18/225 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    +  +F+  FSPN + +A A++D     +++ +     +  +     +  +    F
Sbjct: 609 IVRGHEDEVFDLVFSPNGKYIATASWD--KTAKLWSIVGDKLQELRTFNGHQGRVNKLSF 666

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +GK    +   D+   ++  +L     + LT       S ++SPD   I   S+    
Sbjct: 667 SPDGKYIA-TTSWDKTAKLW--NLDGTLQKTLTGHKDTVWSVNFSPDGQLIATASE---D 720

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + +   +G   K +   + +     V+SP G LIA    +G    + +   DG  ++ 
Sbjct: 721 KTVKLWNRDGELLKTL-PRQSSVVNSAVFSPDGKLIA---TAGWDKTVKIWSIDGRLQKT 776

Query: 386 LV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           L    S + + T+SP G+ +  +     D   K++  +L+G+   
Sbjct: 777 LTGHTSGINSVTFSPDGKLIASASW---DNTVKIW--NLDGKELR 816



 Score = 93.5 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 103/260 (39%), Gaps = 22/260 (8%)

Query: 166 ITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +  EKG+  + + F  +     +G   N+  +  R+G  +  L     + + E  FSP+ 
Sbjct: 363 LREEKGEGFNSVAFSPDGTLMATGSWDNTAKIWSREGKRLHTL-DGHKEAVLEVAFSPDS 421

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           Q +A A++D+     V L  +R  +    +   +  + +  FS +G+    +V  D  M 
Sbjct: 422 QLLATASWDN----TVKLW-SREGKLLHTLEGHKDKVNSITFSPDGQLIA-TVGWDNTMK 475

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           ++  +L             +  S S+SPD  QI   S   G   + +   +G + + + +
Sbjct: 476 LW--NLDGKELRTFRGHQDMIWSVSFSPDGKQIATAS---GDRTVKLWSLDGKELQTL-R 529

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGR 402
             +       +SP G LIA          + +    G +   L      + +  +SP G 
Sbjct: 530 GHQNGVNSVTFSPDGKLIATAS---GDRTVKLWNSKGQELETLYGHTDAVNSVAFSPDGT 586

Query: 403 SLIFSRKKDGDTGSKLYSID 422
           S+        D  +K++ ++
Sbjct: 587 SIA---TAGNDKTAKIWKLN 603



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 104/266 (39%), Gaps = 22/266 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + +     ++ +   DG  ++ L   ++ +     FSP+ + +A A+ D      V L
Sbjct: 504 KQIATASGDRTVKLWSLDGKELQTLRGHQNGVNSV-TFSPDGKLIATASGDR----TVKL 558

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +++        G+  ++  +  FS +G     +   D+   I+ ++  ++   R     
Sbjct: 559 WNSKGQELETLYGHTDAVN-SVAFSPDGTSIA-TAGNDKTAKIWKLNSPNSIIVR--GHE 614

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  +SP+   I   +  +   +L+ +  +   + R     +       +SP G  I
Sbjct: 615 DEVFDLVFSPNGKYIA-TASWDKTAKLWSIVGDKLQELRTFNGHQGRVNKLSFSPDGKYI 673

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           A T +        +   DG+ ++ L      + +  +SP G+ +  + +   D   KL++
Sbjct: 674 ATTSWDKTA---KLWNLDGTLQKTLTGHKDTVWSVNFSPDGQLIATASE---DKTVKLWN 727

Query: 421 IDLN-----GRNETLINTPAYASDPQ 441
            D        R  +++N+  ++ D +
Sbjct: 728 RDGELLKTLPRQSSVVNSAVFSPDGK 753



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/329 (17%), Positives = 114/329 (34%), Gaps = 28/329 (8%)

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEG-KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
            + + Q    +G   LVTG ++  G      ++ +       +    K   SS  S+   
Sbjct: 219 EVKQQQRIRKIGISSLVTGLILALGLAGVAWLQGQ-----KARMSETKAISSSAESFLNA 273

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                  I     G +      I   + + ++  ++ S+  +       +      D +L
Sbjct: 274 NLEFDGLIASIRAGRRIKGTDGIDANTRTQITETLQQSINFV-----REKNRLAEHDGML 328

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               FSP+ + +A A+ D    ++++ +D +      R         +  FS +G     
Sbjct: 329 ESVSFSPDSKFIATASRD--KTVKIWSLDGKKQLVVLREEKGEGFN-SVAFSPDGTLMA- 384

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +   D    I+S   +      L       +  ++SPDS  +   S     +    + S 
Sbjct: 385 TGSWDNTAKIWS--REGKRLHTLDGHKEAVLEVAFSPDSQLLATAS----WDNTVKLWSR 438

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-Q 393
                   +  +       +SP G LIA   +      +     DG + R      ++  
Sbjct: 439 EGKLLHTLEGHKDKVNSITFSPDGQLIATVGWDNT-MKLW--NLDGKELRTFRGHQDMIW 495

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           + ++SP G+ +  +    GD   KL+S+D
Sbjct: 496 SVSFSPDGKQIATAS---GDRTVKLWSLD 521



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 89/226 (39%), Gaps = 24/226 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     ++ + +RDG  ++ L P +  ++    FSP+ + +A A +D    ++++ +D  
Sbjct: 716 TASEDKTVKLWNRDGELLKTL-PRQSSVVNSAVFSPDGKLIATAGWD--KTVKIWSID-- 770

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R  K +    S I +  FS +GK    S   D  + I+  +L       L     +  
Sbjct: 771 -GRLQKTLTGHTSGINSVTFSPDGKLIA-SASWDNTVKIW--NLDGKELRTLRGHKNVVH 826

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + ++SPD   I   S   G   + +   NG + + +   K+A +    +S  G  +A   
Sbjct: 827 NVTFSPDGKLIATAS---GDNTVKIWNINGQELRTLRGYKDAVWSL-RFSLDGKTLA--- 879

Query: 366 FSGEKFAIGVMKKDGSQERL-------LVEDSNLQAPTWSPSGRSL 404
            +G ++ I V                    D     P  +P  +SL
Sbjct: 880 -TGSRYDIVVWHLYLDDLDQLLVRGCDWARDYLQNNPNVNPDEKSL 924


>gi|281421695|ref|ZP_06252694.1| conserved hypothetical protein [Prevotella copri DSM 18205]
 gi|281404190|gb|EFB34870.1| conserved hypothetical protein [Prevotella copri DSM 18205]
          Length = 398

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 90/262 (34%), Gaps = 63/262 (24%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP ++K+A+ +Y   +   +YL +       ++  N R  ++   +S +G++   + +  
Sbjct: 134 SPTEEKLAFLSYKTNNS-NIYLKNLTGAGTTQQRTN-RQQVIDFSYSPDGQKICFTEKNG 191

Query: 280 EAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFE------------------- 319
            +  I+  D        ++T   F + S SY+ D SQI+F                    
Sbjct: 192 SSNRIFITDANKGYGCRQVTANEF-DFSPSYNADMSQILFCRKENSGSFGIWNYQFNDNS 250

Query: 320 -----------------------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                                  S   G  +++ + +    ++ I  +   S+  P  SP
Sbjct: 251 FSNFTSGFNAIPVPNTTDILCVRSSGIGNNEIWRINTETGVEECIVSEGNRSFTSPTISP 310

Query: 357 QGDLIAFTKFS---------------GEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPS 400
            G  I     S                    I V   DGS    +    ++  +P WS  
Sbjct: 311 DGKWILMVGSSMKVVDVAGQNNPNKVYPNTDIFVCHIDGSNLTQITYHAADDLSPVWSKD 370

Query: 401 GRSLIFSRKKDGDT-GSKLYSI 421
           G+ + F  ++   T  + ++ I
Sbjct: 371 GKYIYFVSQRGSSTQTANVWRI 392



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 39/142 (27%), Gaps = 17/142 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N    +         P   PN   +            ++ ++T        +       
Sbjct: 246 FNDNSFSNFTSGFNAIPV--PNTTDILCVRSSGIGNNEIWRINTETGVEECIVSEGNRSF 303

Query: 261 LAPRFSSNGKRALISVQ---------------KDEAMDIYSVDLQSNATERLTNTLFINI 305
            +P  S +GK  L+                       DI+   +  +   ++T     ++
Sbjct: 304 TSPTISPDGKWILMVGSSMKVVDVAGQNNPNKVYPNTDIFVCHIDGSNLTQITYHAADDL 363

Query: 306 SASYSPDSSQIVFESDREGKEQ 327
           S  +S D   I F S R    Q
Sbjct: 364 SPVWSKDGKYIYFVSQRGSSTQ 385


>gi|307154267|ref|YP_003889651.1| Serine/threonine-protein kinase-like domain-containing protein
           [Cyanothece sp. PCC 7822]
 gi|306984495|gb|ADN16376.1| Serine/threonine-protein kinase-like domain protein [Cyanothece sp.
           PCC 7822]
          Length = 700

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 109/339 (32%), Gaps = 38/339 (11%)

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
             LGA +L+ G +  +    +R                KKF S+P     I +  S  + 
Sbjct: 367 KLLGAGILLIGLLETQAYGYIR---------------HKKFPSNPVFL--ITNLPSSWLL 409

Query: 164 QSITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           Q        +   +      +++VSG    ++ + D     ++         +     SP
Sbjct: 410 QKTLTGHSSWVISVAISPDGQTLVSGSGDQTIHIWDLATGQLKRTLTGHSDYVNSVAISP 469

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + Q +   + D      + + D    +  + +      + +   S +G+  + S   D+ 
Sbjct: 470 DGQTLVSGSDDK----TIKIWDLATGQLKRTLTGHSDYVNSVAISPDGQTLV-SGSDDKT 524

Query: 282 MDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + I+  DL +   +R        +   + SPD   +V  SD    + + +        KR
Sbjct: 525 IKIW--DLATGQLKRTLTGHSNEVYPVAISPDGQTLVSGSD---DKTIKIWDLATGQLKR 579

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWS 398
                  +      SP G  +           I +      Q +  +   +    +   S
Sbjct: 580 TLTGHSDAVISVAISPDGQTLVSGSDDKT---IKIWDLATGQLKRTLTGHSDAVISVAIS 636

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           P G++L+       D   K++ +       TL     + 
Sbjct: 637 PDGQTLVSGSD---DKTIKIWDLATGQLKRTLTGHSNWV 672



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 83/260 (31%), Gaps = 40/260 (15%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            V      +  V        ++WD+   +  + +                SD +      
Sbjct: 464 SVAISPDGQTLVSGSDDKTIKIWDLATGQ--LKRTLTGH-----------SDYVNSVAIS 510

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G          +++VSG    ++ + D     ++         ++    SP+ Q +  
Sbjct: 511 PDG----------QTLVSGSDDKTIKIWDLATGQLKRTLTGHSNEVYPVAISPDGQTLVS 560

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D      + + D    +  + +      +++   S +G+  + S   D+ + I+  D
Sbjct: 561 GSDDK----TIKIWDLATGQLKRTLTGHSDAVISVAISPDGQTLV-SGSDDKTIKIW--D 613

Query: 289 LQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           L +   +R LT      IS + SPD   +V  SD    + + +        KR       
Sbjct: 614 LATGQLKRTLTGHSDAVISVAISPDGQTLVSGSD---DKTIKIWDLATGQLKRTLTGHSN 670

Query: 348 SYFDPVWSPQGDLIAFTKFS 367
                  SP G  +    + 
Sbjct: 671 WVLSVAISPDGQTLVSGSYD 690



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 47/146 (32%), Gaps = 12/146 (8%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT      IS + SPD   +V  S   G + +++        KR              SP
Sbjct: 413 LTGHSSWVISVAISPDGQTLVSGS---GDQTIHIWDLATGQLKRTLTGHSDYVNSVAISP 469

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDT 414
            G  +           I +      Q +  +   +    +   SP G++L+       D 
Sbjct: 470 DGQTLVSGSDDKT---IKIWDLATGQLKRTLTGHSDYVNSVAISPDGQTLVSGSD---DK 523

Query: 415 GSKLYSIDLNGRNETLINTPAYASDP 440
             K++ +   G+ +  +   +    P
Sbjct: 524 TIKIWDL-ATGQLKRTLTGHSNEVYP 548



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 60/174 (34%), Gaps = 30/174 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G D   +  ++WD+   +  + +                SD +        G  
Sbjct: 555 GQTLVSGSDDKTI--KIWDLATGQ--LKRTLTGH-----------SDAVISVAISPDG-- 597

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                   +++VSG    ++ + D     ++         +     SP+ Q +   + D 
Sbjct: 598 --------QTLVSGSDDKTIKIWDLATGQLKRTLTGHSDAVISVAISPDGQTLVSGSDDK 649

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                + + D    +  + +    + +L+   S +G+  + S   D+ + I+ +
Sbjct: 650 ----TIKIWDLATGQLKRTLTGHSNWVLSVAISPDGQTLV-SGSYDKTIKIWRL 698


>gi|332665943|ref|YP_004448731.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
 gi|332334757|gb|AEE51858.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
          Length = 1076

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 84/227 (37%), Gaps = 32/227 (14%)

Query: 229 ATYDDEDILRVYLMDT----RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +  ++ I+ VY  D     R     +R+         P FS +GK    + Q D   D+
Sbjct: 31  PSVSEKHIVFVYADDLWLVEREGGEARRLTAHEGTESFPHFSPDGKTIAFTGQYDGNTDV 90

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQK- 339
           + +  +  A +RLT    +++   + PD   ++F S R G      Q Y +   G  +K 
Sbjct: 91  FVLPTEGGAPKRLTWHPGVDVVQGWMPDGKSVLFRSGRAGVPTRSNQFYSVPVEGGFEKM 150

Query: 340 ---------RISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLL- 386
                     IS++ + + + P+  W P+     +  + G +   I ++           
Sbjct: 151 LPIPQAAFGEISENGQYAAYQPITFWDPE-----WRNYRGGQAQPIWILDLKDFSLIQTP 205

Query: 387 -VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +      P W      + F  ++  D  + ++  D   ++   I+
Sbjct: 206 QTDRERHTDPVWYK--GQVYFLSER--DYANNVWRFDPKSKDLKQIS 248



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 74/240 (30%), Gaps = 34/240 (14%)

Query: 206 LTPSRDQILFEPRF-------------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  + D     PR+             SP  Q+  +     E    ++ +          
Sbjct: 288 IQVNADLNYARPRWEDVPASGLANASLSPTGQRALF-----EHRGEIFTVPKENGDWRNL 342

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-----ISA 307
             +  +    P +S +G++            +   D       R    + I         
Sbjct: 343 TQSSGAADRFPAWSPDGQKIAWFSDASGEYQLMIGDQAGLEKPR---AIAIEKPTFFFRP 399

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA---SYFDPVWSPQGDLIAFT 364
           ++SPD   I +    +   +L+ +       K++  +  A      +P WSP    IA++
Sbjct: 400 AWSPDGKYIAYT---DTHLRLWYIDVASGVSKKVDNEPYAHVVRTMNPTWSPDSKWIAYS 456

Query: 365 KFSGEKFA-IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +     F  I +   +  +   + +  ++   P W   G+ L F    D    S    + 
Sbjct: 457 RLLNNLFKAIFLYNVETGKSYQITDGLADAITPVWDAGGKYLYFLASTDYALSSSWLDMS 516



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 77/180 (42%), Gaps = 11/180 (6%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  +  + ++  + R LT S       P +SP+ QK+A+ + D     ++ + D      
Sbjct: 326 RGEIFTVPKENGDWRNLTQSSGAADRFPAWSPDGQKIAWFS-DASGEYQLMIGDQAGLEK 384

Query: 250 PKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--- 305
           P+ I     +    P +S +GK    +   D  + ++ +D+ S  ++++ N  + ++   
Sbjct: 385 PRAIAIEKPTFFFRPAWSPDGKYIAYT---DTHLRLWYIDVASGVSKKVDNEPYAHVVRT 441

Query: 306 -SASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            + ++SPDS  I +        + +++         +I+ D  A    PVW   G  + F
Sbjct: 442 MNPTWSPDSKWIAYSRLLNNLFKAIFLYNVETGKSYQIT-DGLADAITPVWDAGGKYLYF 500



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 60/368 (16%), Positives = 103/368 (27%), Gaps = 124/368 (33%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +++R+G   R LT   +     P FSP+ + +A+    D +   V+++ T    APK
Sbjct: 45  DLWLVEREGGEARRLTA-HEGTESFPHFSPDGKTIAFTGQYDGNT-DVFVLPTE-GGAPK 101

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAM----DIYSVDLQSNATERLT--------- 298
           R+     + +   +  +GK  L    +          YSV ++    + L          
Sbjct: 102 RLTWHPGVDVVQGWMPDGKSVLFRSGRAGVPTRSNQFYSVPVEGGFEKMLPIPQAAFGEI 161

Query: 299 --------------------NTLFINISASYSPD-----------------------SSQ 315
                               N         +  D                         Q
Sbjct: 162 SENGQYAAYQPITFWDPEWRNYRGGQAQPIWILDLKDFSLIQTPQTDRERHTDPVWYKGQ 221

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQ-------------------------------- 343
           + F S+R+    ++       D K+IS                                 
Sbjct: 222 VYFLSERDYANNVWRFDPKSKDLKQISFHKDFDVKSIDACADRLVYEQGGYLHLLDPQSG 281

Query: 344 ---------DKEASYFDPVW-------------SPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                    + + +Y  P W             SP G    F         I  + K+  
Sbjct: 282 KAKQLNIQVNADLNYARPRWEDVPASGLANASLSPTGQRALFEHRG----EIFTVPKENG 337

Query: 382 QERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL---INTPAY 436
             R L + S    + P WSP G+ + +     G+   +L   D  G  +     I  P +
Sbjct: 338 DWRNLTQSSGAADRFPAWSPDGQKIAWFSDASGE--YQLMIGDQAGLEKPRAIAIEKPTF 395

Query: 437 ASDPQWVG 444
              P W  
Sbjct: 396 FFRPAWSP 403



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 77/197 (39%), Gaps = 39/197 (19%)

Query: 279 DEAMDIYSVDLQSNATERL---TNTLFINISASY-------------SPDSSQIVFESDR 322
           ++   ++ +D QS   ++L    N         +             SP   + +F    
Sbjct: 268 EQGGYLHLLDPQSGKAKQLNIQVNADLNYARPRWEDVPASGLANASLSPTGQRALF---- 323

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-S 381
           E + +++ +     D + ++Q   A+   P WSP G  IA+   +  ++ + +  + G  
Sbjct: 324 EHRGEIFTVPKENGDWRNLTQSSGAADRFPAWSPDGQKIAWFSDASGEYQLMIGDQAGLE 383

Query: 382 QERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-----------RNE 428
           + R +   + +    P WSP G+ + ++     DT  +L+ ID+              + 
Sbjct: 384 KPRAIAIEKPTFFFRPAWSPDGKYIAYT-----DTHLRLWYIDVASGVSKKVDNEPYAHV 438

Query: 429 TLINTPAYASDPQWVGF 445
                P ++ D +W+ +
Sbjct: 439 VRTMNPTWSPDSKWIAY 455


>gi|218960530|ref|YP_001740305.1| putative Tricorn protease homolog [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729187|emb|CAO80098.1| putative Tricorn protease homolog [Candidatus Cloacamonas
           acidaminovorans]
          Length = 1066

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 72/189 (38%), Gaps = 25/189 (13%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            + +   + D    +++ +L+     RLT  L +     +SPD  QI F S  EG  ++Y
Sbjct: 13  DQVVFIAEDD----LWTFNLKDKVARRLTANLGMIRYPQFSPDGKQIAFTSTEEGTSEIY 68

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAIGVMKKDGSQERLL 386
           +M S G + KR++      Y    W  +G  I F          + +  +  +G     L
Sbjct: 69  IMPSEGGEAKRLTYLGAYPYTL-RW--KGSKIIFASQHSSPLQHYNLYEIDSEGGSPVEL 125

Query: 387 VEDSNLQAPTWSPSGRSLI-----------FSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                    ++   G   +           + R + G  G  L   + +G+ + LI+   
Sbjct: 126 PYGRATHI-SF---GEKGVVLGRNTGNPARWKRYRGGTAGYLLVDKNGDGKFKKLIDLKG 181

Query: 436 YASDPQWVG 444
             + P W+G
Sbjct: 182 NFAHPMWIG 190



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 85/224 (37%), Gaps = 27/224 (12%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            ++  P+FSP+ +++A+ +  +E    +Y+M +      KR+    +     R+   G +
Sbjct: 41  GMIRYPQFSPDGKQIAFTS-TEEGTSEIYIMPSE-GGEAKRLTYLGAYPYTLRW--KGSK 96

Query: 272 ALISVQKD---EAMDIYSVDLQSNATERLTNTLFINISASYSPDS-------SQIV-FES 320
            + + Q     +  ++Y +D +  +   L          S+                ++ 
Sbjct: 97  IIFASQHSSPLQHYNLYEIDSEGGSPVELPYGRA--THISFGEKGVVLGRNTGNPARWKR 154

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            R G     ++  NG  + +   D + ++  P+W   G+ I F         I     +G
Sbjct: 155 YRGGTAGYLLVDKNGDGKFKKLIDLKGNFAHPMW--IGNRIYFICDHEGIGNIYSCTPEG 212

Query: 381 SQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +      +  A   +S  G+S+I+        G+ L+ +D+
Sbjct: 213 KDLQKHSNHKDFYARGAYS-DGKSIIW------HAGADLWLMDI 249



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 72/202 (35%), Gaps = 19/202 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQK 278
           SP+   +++A           L+    + + ++ G  + +    P+   +GK  L+   +
Sbjct: 285 SPDGGSISFALRGKA------LVSGNWEGSVQQYGFKQGVRYRLPQILPDGKHLLLLSDE 338

Query: 279 DEAMDIYSVDLQS-----NATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVM 331
                     L+      +    + +        +   +P  S +  E+ R    +L V+
Sbjct: 339 PGYERFEIHPLRKDFEKVSEEVVIIDNPDLGRVTNFVPAPKGSLVAIENHRC---ELIVL 395

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDS 390
                + K I ++     +   WSP G  + ++         I +     +Q  ++ +  
Sbjct: 396 DLESKEFKNIDRNGFGLIWAFNWSPDGRWLTYSINRDRNTRHIIIWDSQENQSHIVSKPV 455

Query: 391 -NLQAPTWSPSGRSLIFSRKKD 411
            N   P + P G+ L F+  ++
Sbjct: 456 LNDTVPVFDPEGKYLYFASVRN 477



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/342 (13%), Positives = 113/342 (33%), Gaps = 60/342 (17%)

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF--VSESVVSGIIKNSLCVMDRD 199
           K++    A +  +     D  ++ +   KG+F   +        +       ++     +
Sbjct: 153 KRYRGGTAGY-LLVDKNGDGKFKKLIDLKGNFAHPMWIGNRIYFICDHEGIGNIYSCTPE 211

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR------- 252
           G +++  +  +D       +S + + + +          ++LMD + ++  K        
Sbjct: 212 GKDLQKHSNHKDFYARG-AYS-DGKSIIWHA-----GADLWLMDIKENKPRKLSFAYSSP 264

Query: 253 -IGNFRSMILAPR------FSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTN 299
            +      +  P+       S +G     ++        +    +     +     RL  
Sbjct: 265 MVQRQHKFVSPPKNLEDIYLSPDGGSISFALRGKALVSGNWEGSVQQYGFKQGVRYRL-- 322

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN------GSDQKRISQDKEASYFDPV 353
                      PD   ++  SD  G E+  +            +   I         + V
Sbjct: 323 -------PQILPDGKHLLLLSDEPGYERFEIHPLRKDFEKVSEEVVIIDNPDLGRVTNFV 375

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKD 411
            +P+G L+A       +  + V+  +  + + +  +    + A  WSP GR L +S  +D
Sbjct: 376 PAPKGSLVAI---ENHRCELIVLDLESKEFKNIDRNGFGLIWAFNWSPDGRWLTYSINRD 432

Query: 412 GDTGSKLYSIDLNGRNETLI--------NTPAYASDPQWVGF 445
            +T   +  I  +  N++ I          P +  + +++ F
Sbjct: 433 RNTRHII--IWDSQENQSHIVSKPVLNDTVPVFDPEGKYLYF 472



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 57/160 (35%), Gaps = 13/160 (8%)

Query: 217 PRFSPNQQKVA-------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           P+  P+ + +        Y  ++   + + +   +            R     P     G
Sbjct: 323 PQILPDGKHLLLLSDEPGYERFEIHPLRKDFEKVSEEVVIIDNPDLGRVTNFVPA--PKG 380

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQL 328
               I   ++   ++  +DL+S   + +  N   +  + ++SPD   + +  +R+   + 
Sbjct: 381 SLVAI---ENHRCELIVLDLESKEFKNIDRNGFGLIWAFNWSPDGRWLTYSINRDRNTRH 437

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            ++  +  +Q  I      +   PV+ P+G  + F     
Sbjct: 438 IIIWDSQENQSHIVSKPVLNDTVPVFDPEGKYLYFASVRN 477



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 39/108 (36%), Gaps = 5/108 (4%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P    VA   +  E    + ++D           N   +I A  +S +G+    S+ +D
Sbjct: 377 APKGSLVAIENHRCE----LIVLDLESKEFKNIDRNGFGLIWAFNWSPDGRWLTYSINRD 432

Query: 280 EAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                  + D Q N +  ++  +  +    + P+   + F S R    
Sbjct: 433 RNTRHIIIWDSQENQSHIVSKPVLNDTVPVFDPEGKYLYFASVRNLNP 480



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/95 (12%), Positives = 37/95 (38%), Gaps = 1/95 (1%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  L V+D +    + +  +   +++   +SP+ + + Y+   D +   + + D++ +
Sbjct: 387 NHRCELIVLDLESKEFKNIDRNGFGLIWAFNWSPDGRWLTYSINRDRNTRHIIIWDSQEN 446

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           +    +         P F   GK    +  ++   
Sbjct: 447 Q-SHIVSKPVLNDTVPVFDPEGKYLYFASVRNLNP 480


>gi|127512166|ref|YP_001093363.1| peptidase S41 [Shewanella loihica PV-4]
 gi|126637461|gb|ABO23104.1| peptidase S41 [Shewanella loihica PV-4]
          Length = 1104

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 61/299 (20%), Positives = 112/299 (37%), Gaps = 40/299 (13%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-- 230
           +  R+ FVS+S  +      +  M  DG ++R LT   D  +   R    Q +V +    
Sbjct: 236 WQDRLYFVSDSSGNDN----IWSMTLDGKDLRQLTQFSDWQVRGARL--EQGRVVFQQGA 289

Query: 231 ----YDDEDILRVYLMDTRIDRAPKR----IGNFRSMILAPRFSSNGKRALISVQKDEAM 282
               YD        L        P+R    +        +   + NG + +I+ +     
Sbjct: 290 DIKLYDIASNQVSTLDIHLTSDFPERREHWVNKPMKYATSTSLAPNGDKVVITARSH--- 346

Query: 283 DIYSVDLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD- 337
               V L      RL        +    A  SPD   +   SD  G+++++   ++GSD 
Sbjct: 347 ----VALAGTDGSRLVELGLPGDYRVRGAVMSPDGKWVYGISDASGEQEIWRYSADGSDE 402

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQA 394
            K+++QD +A       SP G  IA   ++G+ + + +  K G   ++L           
Sbjct: 403 AKQLTQDGKALRMALSLSPDGRYIAHDDYNGDLWLLDL--KKGRNSKILTNGQGLGPYGD 460

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGFM 446
             WS   R +  ++ + G    ++    L       +        +PA++ D QW+ F+
Sbjct: 461 VVWSNDSRFIAVTKDERGQLRPQIVLYSLEEERAEALTSDKYESFSPAFSDDGQWLYFI 519



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 93/282 (32%), Gaps = 27/282 (9%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R++    SD   +    E+G    R++F   + +      S  V   D         
Sbjct: 260 KDLRQLT-QFSDWQVRGARLEQG----RVVFQQGADIKLYDIASNQVSTLDIHLTSDFPE 314

Query: 209 SRDQILFEP-------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
            R+  + +P         +PN  KV            V L  T   R  +        + 
Sbjct: 315 RREHWVNKPMKYATSTSLAPNGDKVVITARSH-----VALAGTDGSRLVELGLPGDYRVR 369

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLT-NTLFINISASYSPDSSQIVFE 319
               S +GK            +I+      +   ++LT +   + ++ S SPD   I   
Sbjct: 370 GAVMSPDGKWVYGISDASGEQEIWRYSADGSDEAKQLTQDGKALRMALSLSPDGRYIA-- 427

Query: 320 SDREGKEQLYVMQSN-GSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              +    L+++    G + K ++       Y D VWS     IA TK    +    ++ 
Sbjct: 428 -HDDYNGDLWLLDLKKGRNSKILTNGQGLGPYGDVVWSNDSRFIAVTKDERGQLRPQIVL 486

Query: 378 KDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
               +ER   L  +     +P +S  G+ L F   ++ +   
Sbjct: 487 YSLEEERAEALTSDKYESFSPAFSDDGQWLYFISNREFNATP 528



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/278 (18%), Positives = 101/278 (36%), Gaps = 25/278 (8%)

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
            + +F DW   GA+ L  GRV+ +       + +L+D+   +        +S    R+  
Sbjct: 264 QLTQFSDWQVRGAR-LEQGRVVFQQG----ADIKLYDIASNQVSTLDIHLTSDFPERR-- 316

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
                     +        S  L  +   V    ++ + +   DG+ +  L    D  + 
Sbjct: 317 -------EHWVNKPMKYATSTSLAPNGDKVVITARSHVALAGTDGSRLVELGLPGDYRVR 369

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALI 274
               SP+ + V Y   D      ++          K++  + +++ +A   S +G+    
Sbjct: 370 GAVMSPDGKWV-YGISDASGEQEIWRYSADGSDEAKQLTQDGKALRMALSLSPDGRYIA- 427

Query: 275 SVQKDEAMDIYSVDL-QSNATERLTNTLFIN--ISASYSPDSSQIVFESDREG--KEQLY 329
               D   D++ +DL +   ++ LTN   +       +S DS  I    D  G  + Q+ 
Sbjct: 428 --HDDYNGDLWLLDLKKGRNSKILTNGQGLGPYGDVVWSNDSRFIAVTKDERGQLRPQIV 485

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +        + ++ DK  S F P +S  G  + F    
Sbjct: 486 LYSLEEERAEALTSDKYES-FSPAFSDDGQWLYFISNR 522



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 75/208 (36%), Gaps = 20/208 (9%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +    D   +R+ +  +  L    S++G++       + A ++Y + +Q    +R++  
Sbjct: 63  WIQQLGDAQARRLTSLPAQELGAAISNDGQQLAFVANYEGASEVYVMPIQGGVAKRVSFE 122

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   ++PD   +    +  G    +V++S   +         A   + V    G+ 
Sbjct: 123 NSRVRVQGWTPDGKVLYATDNAFGPANYWVLRSVDPESLTTQDLPLADAIEGVVDNAGEY 182

Query: 361 IAFTKF-------------SGEKFAIGVMKKDGSQE-RLLV--EDSNLQAPTWSPSGRSL 404
           + FT+F              G K  +   K    QE + L    D +++ P        L
Sbjct: 183 VYFTRFGLQATGDNAKVYRGGAKGELWRYKLGSDQEAQPLTAEHDGSVRQPMLWQD--RL 240

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            F     G     ++S+ L+G++   + 
Sbjct: 241 YFVSDSSG--NDNIWSMTLDGKDLRQLT 266



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 68/192 (35%), Gaps = 24/192 (12%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   + + + D    ++   L      RLT+     + A+ S D  Q+ F ++ EG  ++
Sbjct: 51  GDTLVFTAEGD----LWIQQLGDAQARRLTSLPAQELGAAISNDGQQLAFVANYEGASEV 106

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           YVM   G   KR+S +  +      W+P G ++  T  +       V++     E L  +
Sbjct: 107 YVMPIQGGVAKRVSFE-NSRVRVQGWTPDGKVLYATDNAFGPANYWVLRSV-DPESLTTQ 164

Query: 389 D---SNLQAPTWSPSGRSLIFSRK-----------KDGDTGSKLYSIDLNGRNETLINT- 433
           D   ++        +G  + F+R              G    +L+   L    E    T 
Sbjct: 165 DLPLADAIEGVVDNAGEYVYFTRFGLQATGDNAKVYRGGAKGELWRYKLGSDQEAQPLTA 224

Query: 434 --PAYASDPQ-W 442
                   P  W
Sbjct: 225 EHDGSVRQPMLW 236



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 86/268 (32%), Gaps = 26/268 (9%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
             + +S    A    +   +S   E+     R   +    +    +  L +    G    
Sbjct: 14  LGTASSAPLFAAQAENVKAESQATEQNVGYYRSPAIHGDTLVFTAEGDLWIQQL-GDAQA 72

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
               S          S + Q++A+   + E    VY+M  +     KR+    S +    
Sbjct: 73  RRLTSLPAQELGAAISNDGQQLAFVA-NYEGASEVYVMPIQ-GGVAKRVSFENSRVRVQG 130

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFES- 320
           ++ +GK  L +         Y V L+S   E LT     L   I          + F   
Sbjct: 131 WTPDGK-VLYATDNAFGPANYWV-LRSVDPESLTTQDLPLADAIEGVVDNAGEYVYFTRF 188

Query: 321 -----------DREG-KEQLYVMQSNG-SDQKRISQDKEASYFDPV-WSPQGDLIAFTKF 366
                       R G K +L+  +     + + ++ + + S   P+ W    D + F   
Sbjct: 189 GLQATGDNAKVYRGGAKGELWRYKLGSDQEAQPLTAEHDGSVRQPMLWQ---DRLYFVSD 245

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           S     I  M  DG   R L + S+ Q 
Sbjct: 246 SSGNDNIWSMTLDGKDLRQLTQFSDWQV 273



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 97/293 (33%), Gaps = 40/293 (13%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +    + + VM   G   + ++    ++  +  ++P+  KV YAT +       +++ 
Sbjct: 97  VANYEGASEVYVMPIQGGVAKRVSFENSRVRVQ-GWTPDG-KVLYATDNAFGPANYWVLR 154

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-------------VQKDEAMDIYSVDLQ 290
           +    +        +  +     + G+    +              +     +++   L 
Sbjct: 155 SVDPESLTTQDLPLADAIEGVVDNAGEYVYFTRFGLQATGDNAKVYRGGAKGELWRYKLG 214

Query: 291 S-NATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           S    + LT              D  ++ F SD  G + ++ M  +G D ++++Q  +  
Sbjct: 215 SDQEAQPLTAEHDGSVRQPMLWQD--RLYFVSDSSGNDNIWSMTLDGKDLRQLTQFSDWQ 272

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----------- 397
                   QG ++       + + I   +        L  D   +   W           
Sbjct: 273 VRGARLE-QGRVVFQQGADIKLYDIASNQVSTLDIH-LTSDFPERREHWVNKPMKYATST 330

Query: 398 --SPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             +P+G  ++ + +      G  GS+L  + L G     +     + D +WV 
Sbjct: 331 SLAPNGDKVVITARSHVALAGTDGSRLVELGLPGDY--RVRGAVMSPDGKWVY 381


>gi|153010409|ref|YP_001371623.1| peptidase S9 prolyl oligopeptidase [Ochrobactrum anthropi ATCC
           49188]
 gi|151562297|gb|ABS15794.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ochrobactrum anthropi ATCC 49188]
          Length = 605

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 76/181 (41%), Gaps = 6/181 (3%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G+  +    +     +++  L      +LTN      + +++P +  ++  +D 
Sbjct: 25  PAVSPDGELLVYLSDESGTAQVWARSLAGGKPRQLTNLPEPVGNLAFNPKNRDLLITTDW 84

Query: 323 EG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKK 378
            G  + QL++++    + + ++ D    +    WSP G  IA++          I VM  
Sbjct: 85  GGDERHQLWLIEDAEGEPRLLTTDTTVVHAWGCWSPDGTQIAYSANYRDRSHMDIHVMTV 144

Query: 379 DGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAY 436
              + + + E    ++P  ++P G+SL+ +  +   T      +DL  G  E ++     
Sbjct: 145 ATGETKCVYEGIGWRSPAAFAPDGKSLLVNDCQRAMTDQDFCRLDLETGAYENILPHEGR 204

Query: 437 A 437
           A
Sbjct: 205 A 205



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 97/258 (37%), Gaps = 10/258 (3%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYL 241
           +   G  ++ L +++      R LT     +     +SP+  ++AY+  Y D   + +++
Sbjct: 82  TDWGGDERHQLWLIEDAEGEPRLLTTDTTVVHAWGCWSPDGTQIAYSANYRDRSHMDIHV 141

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTN 299
           M        K +           F+ +GK  L+    +     D   +DL++ A E +  
Sbjct: 142 MTVATG-ETKCVYEGIGWRSPAAFAPDGKSLLVNDCQRAMTDQDFCRLDLETGAYENILP 200

Query: 300 TLFI--NISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                   +  +  D S I+  +D+E +   + V   N +    ++  +         SP
Sbjct: 201 HEGRAHYQAPKFFKDGSGILLIADQEREYLSVMVKPHNAASLTELAAFEGQDVEALAISP 260

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
             + IA          + ++ +DG+  + L       + +  W+P G SLI    +   T
Sbjct: 261 DQNRIALVLNRQGWNDLVLIGRDGAVLKQLEMPVVGVVASIAWTPDGMSLI-MPVEGAAT 319

Query: 415 GSKLYSIDLNGRNETLIN 432
              ++  D+  R  T + 
Sbjct: 320 SGDIWRCDVESRVFTRLT 337



 Score = 80.8 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 57/142 (40%), Gaps = 7/142 (4%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +  + SPD   +V+ SD  G  Q++     G   ++++   E    +  ++P+   +  T
Sbjct: 23  VKPAVSPDGELLVYLSDESGTAQVWARSLAGGKPRQLTNLPE-PVGNLAFNPKNRDLLIT 81

Query: 365 KFSGE--KFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYS 420
              G   +  + +++    + RLL  D+ +      WSP G  + +S      +   ++ 
Sbjct: 82  TDWGGDERHQLWLIEDAEGEPRLLTTDTTVVHAWGCWSPDGTQIAYSANYRDRSHMDIHV 141

Query: 421 IDL-NGRNETLINTPAYASDPQ 441
           + +  G  + +     +   P 
Sbjct: 142 MTVATGETKCVYEGIGW-RSPA 162



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 80/209 (38%), Gaps = 15/209 (7%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             +P  SP+ + + Y + D+    +V+         P+++ N    +    F+   +  L
Sbjct: 22  AVKPAVSPDGELLVYLS-DESGTAQVWARSL-AGGKPRQLTNLPEPVGNLAFNPKNRDLL 79

Query: 274 ISVQ--KDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFES---DREGKEQ 327
           I+     DE   ++ ++        L T+T  ++    +SPD +QI + +   DR     
Sbjct: 80  ITTDWGGDERHQLWLIEDAEGEPRLLTTDTTVVHAWGCWSPDGTQIAYSANYRDRS-HMD 138

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQ-ER 384
           ++VM     + K +  +         ++P G  +     + +        +  +    E 
Sbjct: 139 IHVMTVATGETKCV-YEGIGWRSPAAFAPDGKSLLVNDCQRAMTDQDFCRLDLETGAYEN 197

Query: 385 LLVEDS--NLQAPTWSPSGRSLIFSRKKD 411
           +L  +   + QAP +   G  ++    ++
Sbjct: 198 ILPHEGRAHYQAPKFFKDGSGILLIADQE 226



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 85/265 (32%), Gaps = 16/265 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +      G   R LT   + +     F+P  + +   T    D      +    +  P+
Sbjct: 45  QVWARSLAGGKPRQLTNLPEPVGNL-AFNPKNRDLLITTDWGGDERHQLWLIEDAEGEPR 103

Query: 252 RIGNFRSMILA-PRFSSNGKRALISVQKDEAM--DIYSVDLQSNATERLTNTLFINISAS 308
            +    +++ A   +S +G +   S    +    DI+ + + +  T+ +   +     A+
Sbjct: 104 LLTTDTTVVHAWGCWSPDGTQIAYSANYRDRSHMDIHVMTVATGETKCVYEGIGWRSPAA 163

Query: 309 YSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTK 365
           ++PD   ++    +     +    +       + I   +  A Y  P +   G  I    
Sbjct: 164 FAPDGKSLLVNDCQRAMTDQDFCRLDLETGAYENILPHEGRAHYQAPKFFKDGSGILLIA 223

Query: 366 FSGEKFAIGVM----KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               ++ + VM          E    E  +++A   SP    +     + G   + L  I
Sbjct: 224 DQEREY-LSVMVKPHNAASLTELAAFEGQDVEALAISPDQNRIALVLNRQG--WNDLVLI 280

Query: 422 DLNGRNETLINTP--AYASDPQWVG 444
             +G     +  P     +   W  
Sbjct: 281 GRDGAVLKQLEMPVVGVVASIAWTP 305


>gi|281410783|gb|ADA68805.1| HET-E [Podospora anserina]
          Length = 504

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 92/264 (34%), Gaps = 15/264 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 60  QRVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDH----TIKI 115

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D       + +    S +L+  FS +G+R   S   D+ + I+  D  S    +     
Sbjct: 116 WDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA-SGSGDKTIKIW--DTASGTCTQTLEGH 172

Query: 302 FINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             ++ S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  
Sbjct: 173 GNSVWSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQR 229

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +A +    +   I         + L      +Q+  +SP G+ +        D   K++ 
Sbjct: 230 VA-SGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSD---DKTIKIWD 285

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
                  +TL     +     +  
Sbjct: 286 TASGTCTQTLEGHGGWVQSVVFSP 309



 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 89/266 (33%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 144 QRVASGSGDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQRVASGSGDK----TIKI 199

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 200 WDTASGTCTQTLEGHGGSVWSVAFSPDGQRVA-SGSDDKTIKIW--DTASGTCTQTLEGH 256

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S  +SPD  ++   SD    + + +  +      +  +         V+SP G  
Sbjct: 257 GGWVQSVVFSPDGQRVASGSD---DKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQR 313

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A      +   I +           +E       +  +SP G+ +  S   DG    K+
Sbjct: 314 VA---SGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSIDGT--IKI 367

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 368 WDAASGTCTQTLEGHGGWVHSVAFSP 393



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 89/266 (33%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 18  QRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVASGSDDK----TIKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 74  WDAASGTCTQTLEGHGGRVQSVAFSPDGQRVA-SGSDDHTIKIW--DAASGTCTQTLEGH 130

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  
Sbjct: 131 GSSVLSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A          I +           +E    ++ +  +SP G+ +        D   K+
Sbjct: 188 VA---SGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSD---DKTIKI 241

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 242 WDTASGTCTQTLEGHGGWVQSVVFSP 267



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 85/266 (31%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 228 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDK----TIKI 283

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 284 WDTASGTCTQTLEGHGGWVQSVVFSPDGQRVA-SGSDDHTIKIW--DAVSGTCTQTLEGH 340

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S       + +  +      +  +          +SP G  
Sbjct: 341 GDSVWSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQR 397

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A     G    I +           +E     +Q+  +SP G+ +        D   K+
Sbjct: 398 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVA---SGSSDKTIKI 451

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 452 WDTASGTCTQTLEGHGGWVQSVAFSP 477



 Score = 96.2 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 81/239 (33%), Gaps = 14/239 (5%)

Query: 170 KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G +   ++F    + V SG    ++ + D                +    FSP+ Q+VA
Sbjct: 256 HGGWVQSVVFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVA 315

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D      + + D       + +      + +  FS +G+R   S   D  + I+  
Sbjct: 316 SGSDDH----TIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSIDGTIKIW-- 368

Query: 288 DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D  S    + L        S ++SPD  ++   S       + +  +      +  +   
Sbjct: 369 DAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHG 425

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  +SP G  +A +  S +   I         + L      +Q+  +SP G+ + 
Sbjct: 426 GWVQSVAFSPDGQRVA-SGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVA 483



 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 78/241 (32%), Gaps = 19/241 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ Q+VA  + D      + + DT      + +      + +  FS
Sbjct: 1   LEGHGSSVLSVAFSPDGQRVASGSDDK----TIKIWDTASGTGTQTLEGHGGSVWSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
            +G+R   S   D+ + I+  D  S    + L        S ++SPD  ++   SD    
Sbjct: 57  PDGQRVA-SGSDDKTIKIW--DAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSD---D 110

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +  +      +  +   +S     +SP G  +A          I +          
Sbjct: 111 HTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA---SGSGDKTIKIWDTASGTCTQ 167

Query: 386 LVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +E       +  +SP G+ +       GD   K++        +TL           + 
Sbjct: 168 TLEGHGNSVWSVAFSPDGQRVA---SGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFS 224

Query: 444 G 444
            
Sbjct: 225 P 225



 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 16/220 (7%)

Query: 170 KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G +   ++F    + V SG   +++ + D                ++   FSP+ Q+VA
Sbjct: 298 HGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA 357

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D      + + D       + +      + +  FS +G+R   S   D  + I+  
Sbjct: 358 SGSIDG----TIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGTIKIW-- 410

Query: 288 DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D  S    + L        S ++SPD  ++   S     + + +  +      +  +   
Sbjct: 411 DAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS---DKTIKIWDTASGTCTQTLEGHG 467

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                  +SP G  +A          I +           
Sbjct: 468 GWVQSVAFSPDGQRVASGSSDNT---IKIWDTASGTCTQT 504



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 79/244 (32%), Gaps = 30/244 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDR---KQIIG-----KKFFSSPASWRKIA----HTIS--DDI 162
            +          ++WD       + + G     +    SP   R  +    HTI   D +
Sbjct: 270 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAV 329

Query: 163 YQSITGEKGDFNSRILFVS-----ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
             + T         +  V+     + V SG I  ++ + D                +   
Sbjct: 330 SGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSV 389

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q+VA  + D      + + D       + +      + +  FS +G+R   S  
Sbjct: 390 AFSPDGQRVASGSIDG----TIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVA-SGS 444

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D+ + I+  D  S    + L        S ++SPD  ++   S       + +  +   
Sbjct: 445 SDKTIKIW--DTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS---DNTIKIWDTASG 499

Query: 337 DQKR 340
              +
Sbjct: 500 TCTQ 503


>gi|218779970|ref|YP_002431288.1| hypothetical protein Dalk_2126 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218761354|gb|ACL03820.1| WD40 domain protein beta Propeller [Desulfatibacillum alkenivorans
           AK-01]
          Length = 345

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 56/280 (20%), Positives = 90/280 (32%), Gaps = 69/280 (24%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A+          ++ M +      K          AP +S +G R + +       DIY
Sbjct: 67  LAFYKVVFVKDSDIWTMRSDGSNLTKL--TETGTASAPSWSPDGTRIIYTDSAAGNRDIY 124

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQD 344
            +D       +LT+      +A  SPD + I +  +  G   +L+ M ++GS Q+ +   
Sbjct: 125 IMDQDGENKVQLTSADNDEFNACMSPDGATIAYIYEYNGNNRRLWTMAADGSSQQEVLAP 184

Query: 345 ------KEASYFDPVWSPQGDL-------------------------------------- 360
                  +   F   WS  G                                        
Sbjct: 185 VTLNATYDTITFTNGWSTDGTYLLIQTSAPSANYKDLWSVNMSNVSDVLRLTDASGGTGG 244

Query: 361 --------------IAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGR 402
                         I F     SG    I  M  DGS   +L  ++N+    PTWS +G 
Sbjct: 245 LMESSGLDSWYENTIVFNSRSLSGTTLPIVRMDSDGSNMEVLASENNVFYNNPTWSSNGA 304

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA--YASDP 440
            + FS    G   S+LY ++ +G     I +     AS P
Sbjct: 305 KICFSSDATG--VSELYIMNPDGGEIQQITSFGGNGASRP 342



 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 50/238 (21%), Positives = 96/238 (40%), Gaps = 25/238 (10%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +RI++      S      + +MD+DG N +    S D   F    SP+   +AY    + 
Sbjct: 109 TRIIY----TDSAAGNRDIYIMDQDGEN-KVQLTSADNDEFNACMSPDGATIAYIYEYNG 163

Query: 235 DILRVYLMDTRIDRAPKRIG------NFRSMILAPRFSSNGKRALISVQKDEA--MDIYS 286
           +  R++ M        + +        + ++     +S++G   LI      A   D++S
Sbjct: 164 NNRRLWTMAADGSSQQEVLAPVTLNATYDTITFTNGWSTDGTYLLIQTSAPSANYKDLWS 223

Query: 287 VDLQS-NATERLTNTLF-----INISA--SYSPDSSQIVFESDR-EGKEQ-LYVMQSNGS 336
           V++ + +   RLT+        +  S   S+  +   IVF S    G    +  M S+GS
Sbjct: 224 VNMSNVSDVLRLTDASGGTGGLMESSGLDSWYEN--TIVFNSRSLSGTTLPIVRMDSDGS 281

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           + + ++ +    Y +P WS  G  I F+  +     + +M  DG + + +       A
Sbjct: 282 NMEVLASENNVFYNNPTWSSNGAKICFSSDATGVSELYIMNPDGGEIQQITSFGGNGA 339


>gi|239835125|ref|ZP_04683452.1| Prolyl endopeptidase precursor [Ochrobactrum intermedium LMG 3301]
 gi|239821264|gb|EEQ92834.1| Prolyl endopeptidase precursor [Ochrobactrum intermedium LMG 3301]
          Length = 613

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 76/182 (41%), Gaps = 6/182 (3%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G+  +    +     +++  L      ++TN      + +++P S  ++  +D 
Sbjct: 33  PAVSPDGELLVYLSDESGTAQVWARPLAGGRPRQITNLPEPVGNLAFNPKSRDLLITTDW 92

Query: 323 EG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKK 378
            G  + QL+++++   + + ++ D    +    WSP G  IA+           I VM  
Sbjct: 93  GGDERHQLWLIENAEGEPRLLTTDTTVVHAWGCWSPDGTQIAYGANYRDRSHMDIYVMTV 152

Query: 379 DGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAY 436
              + + + + +  + P  ++P G+SL+ +  +   T      +DL  G  E ++     
Sbjct: 153 ATGETKCVYKGAGWRTPAAFAPDGKSLLVNDCQRAMTDQDFCRLDLETGAYENILPHEGR 212

Query: 437 AS 438
           A 
Sbjct: 213 AR 214



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 98/261 (37%), Gaps = 11/261 (4%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDDEDILRVYL 241
           +   G  ++ L +++      R LT     +     +SP+  ++AY A Y D   + +Y+
Sbjct: 90  TDWGGDERHQLWLIENAEGEPRLLTTDTTVVHAWGCWSPDGTQIAYGANYRDRSHMDIYV 149

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTN 299
           M        K +           F+ +GK  L+    +     D   +DL++ A E +  
Sbjct: 150 MTVATG-ETKCVYKGAGWRTPAAFAPDGKSLLVNDCQRAMTDQDFCRLDLETGAYENILP 208

Query: 300 TLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSP 356
                   +  +  D S I+  +D+E +    +++ +G +    ++  +         SP
Sbjct: 209 HEGRARYQAPKFFKDGSGILLIADQEREYLSVMVKPHGVATLTELAAFEGRDVEALAISP 268

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDT 414
             + IA          + ++ +DG   + L         +  W+P G SLI    +    
Sbjct: 269 DQNAIALVVNRQGWNDVVLIGRDGVVRKQLEMPVAAVVASMAWAPDGTSLI-MPVEGATM 327

Query: 415 GSKLYSIDL-NGRNETLINTP 434
              ++  D+ +G    L + P
Sbjct: 328 SGDIWRCDVESGVFTRLTDVP 348



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 56/142 (39%), Gaps = 7/142 (4%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +  + SPD   +V+ SD  G  Q++     G   ++I+   E    +  ++P+   +  T
Sbjct: 31  VKPAVSPDGELLVYLSDESGTAQVWARPLAGGRPRQITNLPE-PVGNLAFNPKSRDLLIT 89

Query: 365 KFSGE--KFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYS 420
              G   +  + +++    + RLL  D+ +      WSP G  + +       +   +Y 
Sbjct: 90  TDWGGDERHQLWLIENAEGEPRLLTTDTTVVHAWGCWSPDGTQIAYGANYRDRSHMDIYV 149

Query: 421 IDL-NGRNETLINTPAYASDPQ 441
           + +  G  + +     +   P 
Sbjct: 150 MTVATGETKCVYKGAGW-RTPA 170



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 86/265 (32%), Gaps = 16/265 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +      G   R +T   + +     F+P  + +   T    D      +    +  P+
Sbjct: 53  QVWARPLAGGRPRQITNLPEPVGNL-AFNPKSRDLLITTDWGGDERHQLWLIENAEGEPR 111

Query: 252 RIGNFRSMILA-PRFSSNGKRALISVQKDEAM--DIYSVDLQSNATERLTNTLFINISAS 308
            +    +++ A   +S +G +        +    DIY + + +  T+ +         A+
Sbjct: 112 LLTTDTTVVHAWGCWSPDGTQIAYGANYRDRSHMDIYVMTVATGETKCVYKGAGWRTPAA 171

Query: 309 YSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTK 365
           ++PD   ++    +     +    +       + I   +  A Y  P +   G  I    
Sbjct: 172 FAPDGKSLLVNDCQRAMTDQDFCRLDLETGAYENILPHEGRARYQAPKFFKDGSGILLIA 231

Query: 366 FSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               ++ + VM K      L      E  +++A   SP   ++     + G   + +  I
Sbjct: 232 DQEREY-LSVMVKPHGVATLTELAAFEGRDVEALAISPDQNAIALVVNRQG--WNDVVLI 288

Query: 422 DLNGRNETLINTP--AYASDPQWVG 444
             +G     +  P  A  +   W  
Sbjct: 289 GRDGVVRKQLEMPVAAVVASMAWAP 313



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 79/209 (37%), Gaps = 15/209 (7%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             +P  SP+ + + Y + D+    +V+       R P++I N    +    F+   +  L
Sbjct: 30  AVKPAVSPDGELLVYLS-DESGTAQVWARPLAGGR-PRQITNLPEPVGNLAFNPKSRDLL 87

Query: 274 ISVQ--KDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFES---DREGKEQ 327
           I+     DE   ++ ++        L T+T  ++    +SPD +QI + +   DR     
Sbjct: 88  ITTDWGGDERHQLWLIENAEGEPRLLTTDTTVVHAWGCWSPDGTQIAYGANYRDRS-HMD 146

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQ-ER 384
           +YVM     + K +            ++P G  +     + +        +  +    E 
Sbjct: 147 IYVMTVATGETKCV-YKGAGWRTPAAFAPDGKSLLVNDCQRAMTDQDFCRLDLETGAYEN 205

Query: 385 LLVEDS--NLQAPTWSPSGRSLIFSRKKD 411
           +L  +     QAP +   G  ++    ++
Sbjct: 206 ILPHEGRARYQAPKFFKDGSGILLIADQE 234


>gi|116180744|ref|XP_001220221.1| hypothetical protein CHGG_01000 [Chaetomium globosum CBS 148.51]
 gi|88185297|gb|EAQ92765.1| hypothetical protein CHGG_01000 [Chaetomium globosum CBS 148.51]
          Length = 1863

 Score =  101 bits (251), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 99/283 (34%), Gaps = 22/283 (7%)

Query: 161  DIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            D +Q        +   + F  +  ++ S     ++ + D      +         +    
Sbjct: 871  DAHQQTLEGHSYWVRAVAFSPDGKTLASASHDRTVRLWDAATGAHQQTLKGHSDWVSAVA 930

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+ + +A A++D    L V L D       + +      + A  FS +GK    S   
Sbjct: 931  FSPDGKTLASASHD----LTVRLWDAATGAHQQTLKGHSDSVRAVAFSPDGKTLA-SASD 985

Query: 279  DEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++  D  + A ++ L        + ++SPD   +   S       + +  +    
Sbjct: 986  DRTVRLW--DAATGAHQQTLKGHSDWVSAVAFSPDGKTLASASH---DLTVRLWDAATGA 1040

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAP 395
             ++  +    S     +SP G  +A          + +        +  ++     ++A 
Sbjct: 1041 HQQTLKGHSDSVSAVAFSPDGKTLASASDDRT---VRLWDAATGAHQQTLKGHIYWVRAV 1097

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             +SP G++L  +     D   +L+     G ++  +   +Y+ 
Sbjct: 1098 AFSPDGKTLASASD---DRTVRLWDA-ATGAHQQTLKGHSYSG 1136



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 57/377 (15%), Positives = 114/377 (30%), Gaps = 73/377 (19%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
            G+ +    D   V  RLWD       + + G  +  +               +Q      
Sbjct: 1103 GKTLASASDDRTV--RLWDAATGAHQQTLKGHSYSGA---------------HQQTLKGH 1145

Query: 171  GDFNSRILFVSESVVSGIIKNSL---CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             D+ S + F  +   +GI  +++    + D      +         +    FSP+ + +A
Sbjct: 1146 SDWVSAVAFSPDGKDAGIGLHTISQSGLWDAATGAHQQTLKGHSDSVRAVAFSPDGKTLA 1205

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A+ D      V L D       + +      + A  FS +GK    S   D  + ++  
Sbjct: 1206 SASDDR----TVRLWDAATGAHQQTLKGHSDSVSAVAFSPDGKTLA-SASDDLTVRLW-- 1258

Query: 288  DLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKE-------------------- 326
            D  + A ++       ++SA ++SPD   +   SD                         
Sbjct: 1259 DAATGAHQQTLKGHSDSVSAVAFSPDGKTLASASDDRTVPALGCSDRRAPADAQGGISIG 1318

Query: 327  --------------QLYVMQSNGSDQK---RISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                          +L  +  +GS  +   R S+           SP            +
Sbjct: 1319 SAPSPSRRTARRWHRLQTIAQSGSGMQRQARTSRRSRGIAIRSAPSPSRRTARRWHRLSD 1378

Query: 370  KFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               I +        +  ++  +   +A  +SP G++L  +     D   +L+        
Sbjct: 1379 DLHIRLWDAATGAHQQTLKGHSDPVRAVAFSPDGKTLASASD---DRTVRLWDAATGAHQ 1435

Query: 428  ETLINTPAYASDPQWVG 444
            +TL     +     +  
Sbjct: 1436 QTLKGHSDWVRAVAFSP 1452



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 100/309 (32%), Gaps = 35/309 (11%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
            G+ +    D L V  RLWD       + + G     S  ++     T++           
Sbjct: 1243 GKTLASASDDLTV--RLWDAATGAHQQTLKGHSDSVSAVAFSPDGKTLASASDDRTVPAL 1300

Query: 171  GDFNSRI-----------LFVSESVVSGIIKNSLCVMDRDGANIRY---LTPSRDQILFE 216
            G  + R               S S  +    + L  + + G+ ++     +     I   
Sbjct: 1301 GCSDRRAPADAQGGISIGSAPSPSRRTARRWHRLQTIAQSGSGMQRQARTSRRSRGIAIR 1360

Query: 217  PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
               SP+ ++ A   +   D L + L D       + +      + A  FS +GK    S 
Sbjct: 1361 SAPSPS-RRTARRWHRLSDDLHIRLWDAATGAHQQTLKGHSDPVRAVAFSPDGKTLA-SA 1418

Query: 277  QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D  + ++  D  + A ++ L        + ++SPD   +   SD      + +  +  
Sbjct: 1419 SDDRTVRLW--DAATGAHQQTLKGHSDWVRAVAFSPDGKTLASASD---DRTVRLWDAAT 1473

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
               ++  +          +SP G  +A          + +        +  ++       
Sbjct: 1474 GAHQQTLKGHIYWVRAVAFSPDGKTLASASDDRT---VRLWDAATGAHQQTLKGH----- 1525

Query: 396  TWSPSGRSL 404
            ++SPS R +
Sbjct: 1526 SYSPSYRHI 1534



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 75/224 (33%), Gaps = 18/224 (8%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTR--IDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FSP   +V    + +           R   D   + +      + A  FS +GK    S 
Sbjct: 841  FSPAMSEVRCTQWKERLSFIKVAAGIRDHWDAHQQTLEGHSYWVRAVAFSPDGKTLA-SA 899

Query: 277  QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D  + ++  D  + A ++ L        + ++SPD   +   S       + +  +  
Sbjct: 900  SHDRTVRLW--DAATGAHQQTLKGHSDWVSAVAFSPDGKTLASASH---DLTVRLWDAAT 954

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-- 393
               ++  +    S     +SP G  +A          + +        +  ++  +    
Sbjct: 955  GAHQQTLKGHSDSVRAVAFSPDGKTLASASDDRT---VRLWDAATGAHQQTLKGHSDWVS 1011

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            A  +SP G++L  +     D   +L+     G ++  +   + +
Sbjct: 1012 AVAFSPDGKTLASASH---DLTVRLWDA-ATGAHQQTLKGHSDS 1051



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/371 (14%), Positives = 111/371 (29%), Gaps = 74/371 (19%)

Query: 130  LWDVKDRKQIIGKKFFSSPASWRKIAHT--------ISDD-----------IYQSITGEK 170
            LWD         +       S R +A +         SDD            +Q      
Sbjct: 1173 LWDAATGAH--QQTLKGHSDSVRAVAFSPDGKTLASASDDRTVRLWDAATGAHQQTLKGH 1230

Query: 171  GDFNSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVA 227
             D  S + F  +        + L V   D   GA+ + L    D +     FSP+ + +A
Sbjct: 1231 SDSVSAVAFSPDGKTLASASDDLTVRLWDAATGAHQQTLKGHSDSVSAV-AFSPDGKTLA 1289

Query: 228  YATYDD------------------------------------EDILRVYLMDTRIDRAPK 251
             A+ D                                       +  +    + + R  +
Sbjct: 1290 SASDDRTVPALGCSDRRAPADAQGGISIGSAPSPSRRTARRWHRLQTIAQSGSGMQRQAR 1349

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYS 310
                 R + +    S + + A    +  + + I   D  + A ++        + A ++S
Sbjct: 1350 TSRRSRGIAIRSAPSPSRRTARRWHRLSDDLHIRLWDAATGAHQQTLKGHSDPVRAVAFS 1409

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            PD   +   SD      + +  +     ++  +          +SP G  +A        
Sbjct: 1410 PDGKTLASASD---DRTVRLWDAATGAHQQTLKGHSDWVRAVAFSPDGKTLASASDDRT- 1465

Query: 371  FAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              + +        +  ++     ++A  +SP G++L  +     D   +L+     G ++
Sbjct: 1466 --VRLWDAATGAHQQTLKGHIYWVRAVAFSPDGKTLASASD---DRTVRLWDA-ATGAHQ 1519

Query: 429  TLINTPAYASD 439
              +   +Y+  
Sbjct: 1520 QTLKGHSYSPS 1530


>gi|167622976|ref|YP_001673270.1| winged helix family two component response transcriptional
           regulator [Shewanella halifaxensis HAW-EB4]
 gi|167352998|gb|ABZ75611.1| putative two component transcriptional regulator, winged helix
           family [Shewanella halifaxensis HAW-EB4]
          Length = 716

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 89/227 (39%), Gaps = 21/227 (9%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPRFSSNGK 270
                P  SP+ + + Y +        +YL D +     PKR+ + ++  L   +S +G 
Sbjct: 186 GSELYPAVSPDGRWLVYGSRGSNKYASLYLKDLQNPAETPKRLTSTKTAELRAVWSPDGS 245

Query: 271 RALISVQKDEAMDIYS--VDLQSNATERL----TNTLFINISASYSPDSSQIVFESD--- 321
                 +       Y   ++L SN   +L    T +  I+     +PD+S++V+  D   
Sbjct: 246 ALYYGSEHRSEDKCYLTKLNLDSNEALKLGECYTYSSAID----IAPDASRLVYIWDGAE 301

Query: 322 --REGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVM 376
               G  +L +    G   KR+  +++      D  +SP G  +A  +  G     I + 
Sbjct: 302 GFGSGLYELSLT-IEGEKPKRLSCTENCSYRDRDIAFSPNGSWLAVARRFGNISEDIFIR 360

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +  +E+ L     +++  +W      LIFS +  G     +  ID
Sbjct: 361 HTETQEEQRLTFGLEDIRGLSWHQDSERLIFSTENSGVRNGYIVGID 407



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 97/278 (34%), Gaps = 55/278 (19%)

Query: 219 FSPNQQKVAYATYDDEDILR--VYLMDTRIDRAPKRIG-----NFRSMILAPRFSSNGKR 271
            +P+  ++ Y     E        L  T     PKR+      ++R   +A  FS NG  
Sbjct: 286 IAPDASRLVYIWDGAEGFGSGLYELSLTIEGEKPKRLSCTENCSYRDRDIA--FSPNGSW 343

Query: 272 ALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             ++ +    + DI+    ++   +RLT  L      S+  DS +++F ++  G    Y+
Sbjct: 344 LAVARRFGNISEDIFIRHTETQEEQRLTFGLEDIRGLSWHQDSERLIFSTENSGVRNGYI 403

Query: 331 MQSNGSDQKRISQDK-------------------------------------------EA 347
           +  +    + +  +                                            E 
Sbjct: 404 VGIDDKQIQPLEVEGMSYPRSIPNSDELVYSNYIRDYHVASFALEQSIPTATFPLLQVEY 463

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
           SY +P +S     I +         I     DGSQ R   +    +  P+WS  G  + F
Sbjct: 464 SYRNPDYSSITQRIVYVSNETGFNEIWSSDTDGSQRRQHTDLKRRVAYPSWSHDGTKVAF 523

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWV 443
               D + G+K++ +D+   N +++ TP    + P W 
Sbjct: 524 LAPDDKNEGNKIHVLDMKTSNISILATPYLDHNRPSWG 561



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 83/210 (39%), Gaps = 14/210 (6%)

Query: 236 ILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSNA 293
              +Y    R     K+ +       L P  S +G+  +   +  ++   +Y  DLQ+ A
Sbjct: 163 GYHLYQDSIRYVPTTKQNLTTEAGSELYPAVSPDGRWLVYGSRGSNKYASLYLKDLQNPA 222

Query: 294 --TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              +RLT+T    + A +SPD S + + S+   +++ Y+ + N    + +   +  +Y  
Sbjct: 223 ETPKRLTSTKTAELRAVWSPDGSALYYGSEHRSEDKCYLTKLNLDSNEALKLGECYTYSS 282

Query: 352 P-VWSPQGDLIAFTKFSGEKFAIGVMKKD----GSQERLLVEDSNL----QAPTWSPSGR 402
               +P    + +     E F  G+ +      G + + L    N     +   +SP+G 
Sbjct: 283 AIDIAPDASRLVYIWDGAEGFGSGLYELSLTIEGEKPKRLSCTENCSYRDRDIAFSPNGS 342

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            L  +R + G+    ++      + E  + 
Sbjct: 343 WLAVAR-RFGNISEDIFIRHTETQEEQRLT 371



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 68/171 (39%), Gaps = 3/171 (1%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G + + + P   + +  PR  PN  ++ Y+ Y  +  +  + ++  I  A   +      
Sbjct: 405 GIDDKQIQPLEVEGMSYPRSIPNSDELVYSNYIRDYHVASFALEQSIPTATFPLLQVEYS 464

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              P +SS  +R +    +    +I+S D   +   + T+        S+S D +++ F 
Sbjct: 465 YRNPDYSSITQRIVYVSNETGFNEIWSSDTDGSQRRQHTDLKRRVAYPSWSHDGTKVAFL 524

Query: 320 S--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +  D+    +++V+    S+   I       +  P W    +++  +   G
Sbjct: 525 APDDKNEGNKIHVLDMKTSNIS-ILATPYLDHNRPSWGWNDEMVLASSKDG 574



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 67/225 (29%), Gaps = 47/225 (20%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y     +      RI++VS         N +   D DG+  R       + +  P +S +
Sbjct: 463 YSYRNPDYSSITQRIVYVSNETG----FNEIWSSDTDGS-QRRQHTDLKRRVAYPSWSHD 517

Query: 223 QQKVAYATYDDED-ILRVYLMDTRIDRAPKRIGNFRSMILAPRF----------SSNG-- 269
             KVA+   DD++   +++++D +          +      P +          S +G  
Sbjct: 518 GTKVAFLAPDDKNEGNKIHVLDMKTSNISILATPYLDHNR-PSWGWNDEMVLASSKDGIT 576

Query: 270 -------------------------KRALISVQKDEAMDIYSVDLQS-NATERLTNTLFI 303
                                     + + ++       ++ + L S      L +    
Sbjct: 577 EFYLDNRLPKVISPIDMRLGKMIAEDKLVFTLL--GKNGLWLLSLASPEQPSELISANHF 634

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
               ++      + F + R G + +   + N      I +    S
Sbjct: 635 GEGYNWVATDKGVYFRTSRSGYQLINFWRFNTGLITPILKLPSGS 679


>gi|77361985|ref|YP_341559.1| putative peptidase [Pseudoalteromonas haloplanktis TAC125]
 gi|76876896|emb|CAI89113.1| putative peptidase [Pseudoalteromonas haloplanktis TAC125]
          Length = 672

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 104/281 (37%), Gaps = 59/281 (20%)

Query: 222 NQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           + + V +            I  ++ +D +  R  + + +   M  +P+ S +G R     
Sbjct: 43  DGKTVYFVRNRMDIKTDRKIGNIWTVDYKT-RQIQPLTSGVHMDHSPKLSPDGSRLAFIS 101

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF------ESDR-------- 322
            +D +  IY   L++ A  +++N      + S+SPD+ Q+ F       S          
Sbjct: 102 NRDGSNQIYMKWLKTGAVSKISNLTSTPKALSWSPDAKQLAFSMFVATTSSSPISLPGKP 161

Query: 323 --------------------------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                                     +G EQL+++ +NG + K+++ D   +  +  +S 
Sbjct: 162 EGATWAEPAKYIDDVYYRADGAGYAKKGFEQLFIIDANGGNAKQLTFDDFNNGGEVSFSK 221

Query: 357 QGDLIAFTKFSGEKF-------AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR 408
               + F+      +        +  +     +   + + +   + P  SP+GR L ++ 
Sbjct: 222 DKKALYFSANRHNNYLLKPTNSEVYKLNLITLEVTAVTDRNGPDRQPQVSPNGRYLAYTG 281

Query: 409 KKDGDT---GSKLYSIDL-NGRNETLI-NTPAYASDPQWVG 444
             D  T    ++LY  DL +G+   L  +     +  +W G
Sbjct: 282 YDDKQTNYENTQLYIRDLRSGKTTNLTADLDRSVAKIKWSG 322



 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 95/301 (31%), Gaps = 60/301 (19%)

Query: 174 NSRILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           + + ++   +     +     ++  +D     I+ LT S   +   P+ SP+  ++A+ +
Sbjct: 43  DGKTVYFVRNRMDIKTDRKIGNIWTVDYKTRQIQPLT-SGVHMDHSPKLSPDGSRLAFIS 101

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-------------- 276
             D    ++Y+   +     K I N  S   A  +S + K+   S+              
Sbjct: 102 NRDGSN-QIYMKWLKTGAVSK-ISNLTSTPKALSWSPDAKQLAFSMFVATTSSSPISLPG 159

Query: 277 --------------------------QKDEAMDIYSVDLQSNATERLTNTLFINI-SASY 309
                                      K     ++ +D      ++LT   F N    S+
Sbjct: 160 KPEGATWAEPAKYIDDVYYRADGAGYAKKGFEQLFIIDANGGNAKQLTFDDFNNGGEVSF 219

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------QDKEASYFDPVWSPQGDLIAF 363
           S D   + F ++R     L    S       I+       D+      P  SP G  +A+
Sbjct: 220 SKDKKALYFSANRHNNYLLKPTNSEVYKLNLITLEVTAVTDRNGPDRQPQVSPNGRYLAY 279

Query: 364 TKFSG-----EKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGS 416
           T +       E   + +      +   L  D +       WS + + + FS    G T  
Sbjct: 280 TGYDDKQTNYENTQLYIRDLRSGKTTNLTADLDRSVAKIKWSGNSKGIYFSYADQGQTTL 339

Query: 417 K 417
            
Sbjct: 340 A 340



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 79/254 (31%), Gaps = 61/254 (24%)

Query: 194 CVMDRDGANIRYLTPSR-------DQILFEP---RFSPNQQKVAYAT------------- 230
            + +RDG+N  Y+   +         +   P    +SP+ +++A++              
Sbjct: 99  FISNRDGSNQIYMKWLKTGAVSKISNLTSTPKALSWSPDAKQLAFSMFVATTSSSPISLP 158

Query: 231 --------------------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                                     Y  +   +++++D     A +   +  +      
Sbjct: 159 GKPEGATWAEPAKYIDDVYYRADGAGYAKKGFEQLFIIDANGGNAKQLTFDDFNNGGEVS 218

Query: 265 FSSNGKRALISVQKDEAM-------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           FS + K    S  +           ++Y ++L +     +T+    +     SP+   + 
Sbjct: 219 FSKDKKALYFSANRHNNYLLKPTNSEVYKLNLITLEVTAVTDRNGPDRQPQVSPNGRYLA 278

Query: 318 FESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +    +        QLY+          ++ D + S     WS     I F+     +  
Sbjct: 279 YTGYDDKQTNYENTQLYIRDLRSGKTTNLTADLDRSVAKIKWSGNSKGIYFSYADQGQTT 338

Query: 373 IGVMKKDGSQERLL 386
           +    + GS++ + 
Sbjct: 339 LAYQPRSGSRKVIT 352


>gi|254505723|ref|ZP_05117869.1| peptidase, S41 family [Vibrio parahaemolyticus 16]
 gi|219551376|gb|EED28355.1| peptidase, S41 family [Vibrio parahaemolyticus 16]
          Length = 1080

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 78/243 (32%), Gaps = 42/243 (17%)

Query: 206 LTPSRDQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           +  + D     P++      SP+ +K+A+             + +        +      
Sbjct: 22  VATASDIQNTSPKWLRDIAMSPDGEKIAFTYAGQ------IWLISANGGEATPLTGSDVY 75

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              P +S +G+      ++  + D++ V +     +RLT     ++   +S D S+++F 
Sbjct: 76  SDHPVWSPDGQSIAFQSKRFGSGDVFIVPVTGGQAKRLTYHSSADVPYEFSSDGSEVLFS 135

Query: 320 SDREG--------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT- 364
           S R G               ++LY + S G  +K +  +  ++       P G    +T 
Sbjct: 136 SRRLGDSDATLNNGFMGNSSKRLYSVSSEGGREKLLLSNPVSALSMK---PDGTAYLYTD 192

Query: 365 -----------KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDG 412
                        S     I        Q R L       +   W+    S  +  ++ G
Sbjct: 193 EPSFEQEWRKRAVSDATRDIWRYDTQTKQHRKLTSFRGEDRNAVWASDDSSFYYLSERSG 252

Query: 413 DTG 415
              
Sbjct: 253 SFN 255



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 56/319 (17%), Positives = 120/319 (37%), Gaps = 43/319 (13%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +D + ++    +K  S     R       D  +  ++   G FN       + +  G   
Sbjct: 215 YDTQTKQH---RKLTSFRGEDRNAVWASDDSSFYYLSERSGSFN----VWKKRMEDGAEP 267

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-KVAYATYDDEDILRVYLMDTRIDRA 249
             +   + D   +R+L+ S    L    +  N Q  +  A   + + + V++  T +++ 
Sbjct: 268 EQI--TNHDTLPVRFLSASLSGDL---AYGYNGQIWLKKAEQANAEPVDVFIRQTSLNQG 322

Query: 250 PKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            + +  N  +  +A   S       I  + D    +Y V L S  T+R+T+T       S
Sbjct: 323 RRFVTLNHEATEIA--VSPYAPEVAIVARGD----VYVVSLLSGMTKRITDTPAAERDIS 376

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSD----------QKRISQDKEASYFDPVWSPQG 358
           +S D   I++ S+R G   ++    N +           ++++S DK    F P++SP G
Sbjct: 377 FSNDGYSIMYASERNGNWDVFQSYVNDTGKSFSTSYDIVEEQLS-DKPVDEFQPLYSPNG 435

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-------NLQAPTWSPSGRSLIFSRKKD 411
             + + +       + V   +      L+++           + +WSP    +    + +
Sbjct: 436 KRVLYREDRNT---LKVYDLEQDATYTLLDNQALYSYMDGDLSYSWSPDSEYVA--TRNN 490

Query: 412 GDTGSKLYSIDLNGRNETL 430
            +  S +  I  +G    +
Sbjct: 491 SELDSDVVLIKADGSEAPI 509



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 50/356 (14%), Positives = 116/356 (32%), Gaps = 94/356 (26%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
             I F S+   SG     + ++   G   + LT      +    FS +  +V +++    
Sbjct: 86  QSIAFQSKRFGSG----DVFIVPVTGGQAKRLTYHSSADVPY-EFSSDGSEVLFSSRRLG 140

Query: 235 DI-------------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--- 278
           D               R+Y + +   R    + N    + A     +G   L + +    
Sbjct: 141 DSDATLNNGFMGNSSKRLYSVSSEGGREKLLLSNP---VSALSMKPDGTAYLYTDEPSFE 197

Query: 279 ---------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
                    D   DI+  D Q+    +LT+    + +A ++ D S   + S+R G   ++
Sbjct: 198 QEWRKRAVSDATRDIWRYDTQTKQHRKLTSFRGEDRNAVWASDDSSFYYLSERSGSFNVW 257

Query: 330 VMQS-NGSDQKRISQ---------------DKEASYFDPVW------------------- 354
             +  +G++ ++I+                D    Y   +W                   
Sbjct: 258 KKRMEDGAEPEQITNHDTLPVRFLSASLSGDLAYGYNGQIWLKKAEQANAEPVDVFIRQT 317

Query: 355 -----------SPQGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAP-TW 397
                      + +   IA + ++ E     +  + V+       + + +    +   ++
Sbjct: 318 SLNQGRRFVTLNHEATEIAVSPYAPEVAIVARGDVYVVSLLSGMTKRITDTPAAERDISF 377

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGR---------NETLINTPAYASDPQWVG 444
           S  G S++++ +++G+       ++  G+          E L + P     P +  
Sbjct: 378 SNDGYSIMYASERNGNWDVFQSYVNDTGKSFSTSYDIVEEQLSDKPVDEFQPLYSP 433



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 21/196 (10%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNA--- 293
           VY++        KRI +  +      FS++G   + + +++   D++   V+    +   
Sbjct: 352 VYVVSLLSG-MTKRITDTPAAERDISFSNDGYSIMYASERNGNWDVFQSYVNDTGKSFST 410

Query: 294 -----TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-- 346
                 E+L++         YSP+  ++++  DR     L V          +  ++   
Sbjct: 411 SYDIVEEQLSDKPVDEFQPLYSPNGKRVLYREDR---NTLKVYDLEQDATYTLLDNQALY 467

Query: 347 ---ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSG 401
                     WSP  + +A    S     + ++K DGS+    +         P +S  G
Sbjct: 468 SYMDGDLSYSWSPDSEYVATRNNSELDSDVVLIKADGSEAPINITKSGFTQNRPKFSQDG 527

Query: 402 RSLIFSRKKDGDTGSK 417
           +++ +    +   G  
Sbjct: 528 QAVYWLSNANSTYGID 543



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 75/225 (33%), Gaps = 35/225 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++  +G     LT   D     P +SP+ Q +A+ +          +  T      K
Sbjct: 55  QIWLISANGGEATPLT-GSDVYSDHPVWSPDGQSIAFQSKRFGSGDVFIVPVT--GGQAK 111

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMD--------------IYSVDLQSNATERL 297
           R+    S  +   FSS+G   L S ++    D              +YSV  +    + L
Sbjct: 112 RLTYHSSADVPYEFSSDGSEVLFSSRRLGDSDATLNNGFMGNSSKRLYSVSSEGGREKLL 171

Query: 298 TNTLFINISA-SYSPDSSQIVFE------------SDREGKEQLYVMQSNGSDQKRISQD 344
              L   +SA S  PD +  ++             +  +    ++   +     ++++  
Sbjct: 172 ---LSNPVSALSMKPDGTAYLYTDEPSFEQEWRKRAVSDATRDIWRYDTQTKQHRKLTSF 228

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVE 388
           +     + VW+       +       F +   +  DG++   +  
Sbjct: 229 R-GEDRNAVWASDDSSFYYLSERSGSFNVWKKRMEDGAEPEQITN 272



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 73/170 (42%), Gaps = 17/170 (10%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNG 269
            FS +   + YA+  +   D+ + Y+ DT        D   +++ +       P +S NG
Sbjct: 376 SFSNDGYSIMYASERNGNWDVFQSYVNDTGKSFSTSYDIVEEQLSDKPVDEFQPLYSPNG 435

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDRE 323
           KR L    +++   +   DL+ +AT  L +   +      ++S S+SPDS  +   ++ E
Sbjct: 436 KRVLY---REDRNTLKVYDLEQDATYTLLDNQALYSYMDGDLSYSWSPDSEYVATRNNSE 492

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
               + +++++GS+          +   P +S  G  + +   +   + I
Sbjct: 493 LDSDVVLIKADGSEAPINITKSGFTQNRPKFSQDGQAVYWLSNANSTYGI 542



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 7/101 (6%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
           I         D   SP G+ IAFT        I ++  +G +   L   D     P WSP
Sbjct: 28  IQNTSPKWLRDIAMSPDGEKIAFTYAG----QIWLISANGGEATPLTGSDVYSDHPVWSP 83

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            G+S+ F  K+ G     ++ + + G     +   + A  P
Sbjct: 84  DGQSIAFQSKRFGSG--DVFIVPVTGGQAKRLTYHSSADVP 122



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 13/66 (19%)

Query: 386 LVEDSNLQAPTW------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYAS 438
              D    +P W      SP G  + F+         +++ I  NG   T L  +  Y+ 
Sbjct: 24  TASDIQNTSPKWLRDIAMSPDGEKIAFTY------AGQIWLISANGGEATPLTGSDVYSD 77

Query: 439 DPQWVG 444
            P W  
Sbjct: 78  HPVWSP 83



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 50/119 (42%), Gaps = 5/119 (4%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           ++       + +  +    +R+  + +  +    S+N +  ++   + +  +I+ +DL +
Sbjct: 586 ENSPPEPSIIEEKGLKYRTERVTAYSTSPMFTHLSANNQYMVVISAEGDNAEIFEIDLTT 645

Query: 292 NATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                L    + ++ +A+ +PD   +V      G + +  +    ++ + I    +A+Y
Sbjct: 646 GERTPLFTRSYYDVRAAAMAPDDETLVII----GDQGIEKLNVVTAESEYIDYAAQANY 700


>gi|298249291|ref|ZP_06973095.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297547295|gb|EFH81162.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 692

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 102/273 (37%), Gaps = 26/273 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG    ++ V +    +         + ++   +SP+  ++A  ++D   ++RV+ 
Sbjct: 419 KRIASGGGDKTVQVWEAAKGSHILTYREHTEGVYGLAWSPDGARIASGSFD--KMVRVWD 476

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +               +++    +S +GK   ++  +       +VD    +  +    L
Sbjct: 477 VAEGGHIFTYVYTGHDNLVEEVAWSPDGKWVAVTGVRTMEAWS-AVDGSQRSIYQ--RGL 533

Query: 302 FINISASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               + ++SP D  QI       G   +Y+  +    Q  + +          WSP G  
Sbjct: 534 GAAKTVAWSPHDGRQIA----SGGGNMVYIWNTADGKQTFVYRGHTDRVDTVAWSPDGKR 589

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A     G+   + V       + ++       + +  WSP G+ ++       D  +++
Sbjct: 590 VA---SGGKDKTVHVWDAANGDDVVIYRGHAEYVNSVAWSPDGKRIV---SGGNDETAQV 643

Query: 419 YSIDLNGR-------NETLINTPAYASDPQWVG 444
           +    NG+       + + +N  A++ + +W+ 
Sbjct: 644 WDA-TNGKPIFTYRGHTSDVNAVAWSPNGKWIA 675



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 83/277 (29%), Gaps = 47/277 (16%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
            W+  GA         +          R+WDV +   I    +        ++A      
Sbjct: 455 AWSPDGA---------RIASGSFDKMVRVWDVAEGGHIFTYVYTGHDNLVEEVA------ 499

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
                    G + +     +    S            DG+  R +            +SP
Sbjct: 500 -----WSPDGKWVAVTGVRTMEAWSA----------VDGS-QRSIYQRGLGAAKTVAWSP 543

Query: 222 -NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + +++A           VY+ +T   +           +    +S +GKR        +
Sbjct: 544 HDGRQIA-----SGGGNMVYIWNTADGKQTFVYRGHTDRVDTVAWSPDGKRVA---SGGK 595

Query: 281 AMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              ++  D  +     +       + S ++SPD  +IV      G ++   +    + + 
Sbjct: 596 DKTVHVWDAANGDDVVIYRGHAEYVNSVAWSPDGKRIV----SGGNDETAQVWDATNGKP 651

Query: 340 RISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGV 375
             +     S  +   WSP G  IA +   G+   + V
Sbjct: 652 IFTYRGHTSDVNAVAWSPNGKWIA-SGDDGKSARVWV 687


>gi|126656053|ref|ZP_01727437.1| Peptidase C14, caspase catalytic subunit p20 [Cyanothece sp.
           CCY0110]
 gi|126622333|gb|EAZ93039.1| Peptidase C14, caspase catalytic subunit p20 [Cyanothece sp.
           CCY0110]
          Length = 1015

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 105/280 (37%), Gaps = 17/280 (6%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGI 188
           + +     +I+ K+  + P     +  TI       + G      S ++    +++VSG 
Sbjct: 565 IVEAVRAGKILQKQKATDPEVMDALMATIQSRERNRLEGHDDGTKSVVVSPDGQTLVSGS 624

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              ++ V +     I +     +  +    FSP+ Q +  ++ D      + + +  I  
Sbjct: 625 ADKTIKVWNLATGEIIHTLKGHNDWVLSVSFSPDGQTLVSSSGDR----IIRVWNLEIGG 680

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISA 307
             + +      + +  FS +G+  + S   D+ + ++  +L +    R LT      IS 
Sbjct: 681 EIRTLKGHNDWVFSVSFSPDGQTLV-SSSADKTIKVW--NLVTGEAIRTLTGHDDGVISV 737

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S SP+   +V  SD    + + V      ++ R  +  +       +SP G  +      
Sbjct: 738 SISPNGQTLVSGSD---DKTIKVWNLETGEEIRTLKGHDGWILSDSFSPDGQTLV---SD 791

Query: 368 GEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
            +   I V      +    L   D  + + + SP G++L+
Sbjct: 792 SDDKTIKVWNLATGEVIHTLKGHDGEVYSVSISPDGQTLV 831



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 83/248 (33%), Gaps = 16/248 (6%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            I      + G  +  I    +++VSG    ++ V + +           D  +    FS
Sbjct: 723 AIRTLTGHDDGVISVSISPNGQTLVSGSDDKTIKVWNLETGEEIRTLKGHDGWILSDSFS 782

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ Q +      D D   + + +         +      + +   S +G+  + S   D+
Sbjct: 783 PDGQTLV----SDSDDKTIKVWNLATGEVIHTLKGHDGEVYSVSISPDGQTLV-SGSHDK 837

Query: 281 AMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + ++  +L +      LT       S S SPD   +V  S     + L V      +  
Sbjct: 838 TIKVW--NLATEEVIHTLTGHDDFVNSVSISPDGQTLVSGSS---DKTLKVWNLETGEVI 892

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLV-EDSNLQAPTW 397
           R     +        S  G  +           + V      +E R L   D ++ + + 
Sbjct: 893 RTLTGHDDWVGSVSISTDGQTLV---SGSGDKTLKVWNLATGEEIRTLTGHDGSVSSVSI 949

Query: 398 SPSGRSLI 405
           SP G++L+
Sbjct: 950 SPDGQTLV 957



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 67/189 (35%), Gaps = 11/189 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++VS     ++ V +     + +     D  ++    SP+ Q +   ++D      + +
Sbjct: 786 QTLVSDSDDKTIKVWNLATGEVIHTLKGHDGEVYSVSISPDGQTLVSGSHDK----TIKV 841

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            +   +     +      + +   S +G+  + S   D+ + ++  +L++    R LT  
Sbjct: 842 WNLATEEVIHTLTGHDDFVNSVSISPDGQTLV-SGSSDKTLKVW--NLETGEVIRTLTGH 898

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S S S D   +V  S   G + L V      ++ R     + S      SP G  
Sbjct: 899 DDWVGSVSISTDGQTLVSGS---GDKTLKVWNLATGEEIRTLTGHDGSVSSVSISPDGQT 955

Query: 361 IAFTKFSGE 369
           +        
Sbjct: 956 LVSGSSDNT 964



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 51/152 (33%), Gaps = 13/152 (8%)

Query: 276 VQKDEAMDIYSVD-----LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +QK +A D   +D     +QS    RL        S   SPD   +V  S     + + V
Sbjct: 575 LQKQKATDPEVMDALMATIQSRERNRLEGHDDGTKSVVVSPDGQTLVSGS---ADKTIKV 631

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                 +     +          +SP G  +  +        I V   +   E   ++  
Sbjct: 632 WNLATGEIIHTLKGHNDWVLSVSFSPDGQTLVSSS---GDRIIRVWNLEIGGEIRTLKGH 688

Query: 391 NLQ--APTWSPSGRSLIFSRKKDGDTGSKLYS 420
           N    + ++SP G++L+ S          L +
Sbjct: 689 NDWVFSVSFSPDGQTLVSSSADKTIKVWNLVT 720


>gi|242759868|ref|XP_002339873.1| Pfs, NACHT and WD domain protein [Talaromyces stipitatus ATCC 10500]
 gi|218723069|gb|EED22486.1| Pfs, NACHT and WD domain protein [Talaromyces stipitatus ATCC 10500]
          Length = 1341

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 108/323 (33%), Gaps = 39/323 (12%)

Query: 120  GKDRLRVEFRLWDVKDR---KQIIGKKFF--------------SSPASWRKIAHTISDDI 162
                     +LWD       + + G  +                S     K+    + ++
Sbjct: 696  ASGSRDKTIKLWDATTGEVKQTLKGHDYVLSAAFSPDGKLIASGSEDETIKLWDAATGEV 755

Query: 163  YQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
              ++ G     +S         + SG    ++ + D     ++      D  ++   FSP
Sbjct: 756  NHTLEGHSDIISSVAFSPDRKFIASGSRDKTIKLRDAATGEVKQTLEGHDDTVWSIAFSP 815

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + + +A  + D      + L D         +      + +  FS +GK    S  +D+ 
Sbjct: 816  DGKLIASGSRDK----TIKLWDAATGEVKHTLKGHDDTVWSIAFSPDGKLIA-SGSRDKT 870

Query: 282  MDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + ++  D+ +   ++ T     +   S ++SPD   I   S     + + +  +   + K
Sbjct: 871  IKLW--DVATGEVKQ-TLEGHDDTVRSIAFSPDGKLIASGSH---DKTIKLWDAATGEVK 924

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--W 397
               +  +       +SP G+ IA      E  +I +       ++  +E  +    +  +
Sbjct: 925  HTLKGHDDMILSVTFSPDGNFIA---SGSEDRSIKLWDVATGVDKHTLEGHDDTVWSIAF 981

Query: 398  SPSGRSLIFSRKKDGDTGSKLYS 420
            SP G+ +       G    KL+ 
Sbjct: 982  SPDGKLIA---SGPGGKTIKLWD 1001



 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 85/224 (37%), Gaps = 18/224 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D     +++     D  ++   FSP+ + +A  + D      + L D  
Sbjct: 822  SGSRDKTIKLWDAATGEVKHTLKGHDDTVWSIAFSPDGKLIASGSRDK----TIKLWDVA 877

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                 + +      + +  FS +GK    S   D+ + ++  D  +   +  L     + 
Sbjct: 878  TGEVKQTLEGHDDTVRSIAFSPDGKLIA-SGSHDKTIKLW--DAATGEVKHTLKGHDDMI 934

Query: 305  ISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +S ++SPD + I   S DR     + +        K   +  + + +   +SP G LIA 
Sbjct: 935  LSVTFSPDGNFIASGSEDRS----IKLWDVATGVDKHTLEGHDDTVWSIAFSPDGKLIA- 989

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
                     I +      + +  ++  +    + T+SP G+ + 
Sbjct: 990  --SGPGGKTIKLWDAATGEVKHTLKGHDDMILSVTFSPDGKLIA 1031



 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 82/221 (37%), Gaps = 12/221 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D     +++     D ++    FSP+ + +A  + D      + L D  
Sbjct: 990  SGPGGKTIKLWDAATGEVKHTLKGHDDMILSVTFSPDGKLIASGSEDR----SIKLWDAA 1045

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                   +     MIL+  FS +GK    S  +DE + ++  D  +             I
Sbjct: 1046 KGEVKHTLEGHSDMILSVAFSPDGKLIA-SGSEDETIKLW--DAATGEVNHTLEGHSDMI 1102

Query: 306  SA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  ++SPD     F +     + + +      + K+  +    +     +SP G LIA +
Sbjct: 1103 SLVAFSPDGK---FIASGSRDKTIKLWDVATGEVKQTLESYNYTVLSVTFSPDGKLIA-S 1158

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                E   +  +     +  L   D  + +  +SP G+ + 
Sbjct: 1159 GSEDETIKLWDVATGVDKHTLEGHDDTVWSIAFSPDGKLIA 1199



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 106/295 (35%), Gaps = 45/295 (15%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI---SDDIYQSITGEK 170
            G++I  G     +  +LWD                    ++ HT+    D I        
Sbjct: 985  GKLIASGPGGKTI--KLWDAATG----------------EVKHTLKGHDDMILSVTFSPD 1026

Query: 171  GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            G          + + SG    S+ + D     +++       ++    FSP+ + +A  +
Sbjct: 1027 G----------KLIASGSEDRSIKLWDAAKGEVKHTLEGHSDMILSVAFSPDGKLIASGS 1076

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             D+     + L D         +     MI    FS +GK    S  +D+ + ++  D+ 
Sbjct: 1077 EDE----TIKLWDAATGEVNHTLEGHSDMISLVAFSPDGKFIA-SGSRDKTIKLW--DVA 1129

Query: 291  SNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +   ++ L +  +  +S ++SPD   I   S+    E + +        K   +  + + 
Sbjct: 1130 TGEVKQTLESYNYTVLSVTFSPDGKLIASGSE---DETIKLWDVATGVDKHTLEGHDDTV 1186

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            +   +SP G LIA          I +      + +  ++ S + + ++  +G  L
Sbjct: 1187 WSIAFSPDGKLIASGSRDKT---IKLWDAATGEVKHTLKGSRVSSVSFDTNGLYL 1238



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 87/235 (37%), Gaps = 22/235 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +R L    D +     FS + + +A  + D      + L D       + +      
Sbjct: 670 GPLVRTLVDHHDSVHSV-AFSRDGKLIASGSRDK----TIKLWDATTGEVKQTLKGHD-Y 723

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVF 318
           +L+  FS +GK    S  +DE + ++  D  +      L     I  S ++SPD     F
Sbjct: 724 VLSAAFSPDGKLIA-SGSEDETIKLW--DAATGEVNHTLEGHSDIISSVAFSPDRK---F 777

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +     + + +  +   + K+  +  + + +   +SP G LIA          I +   
Sbjct: 778 IASGSRDKTIKLRDAATGEVKQTLEGHDDTVWSIAFSPDGKLIASGSRDKT---IKLWDA 834

Query: 379 DGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              + +  ++  +    +  +SP G+ +    +   D   KL+ +   G  +  +
Sbjct: 835 ATGEVKHTLKGHDDTVWSIAFSPDGKLIASGSR---DKTIKLWDV-ATGEVKQTL 885



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 68/191 (35%), Gaps = 13/191 (6%)

Query: 219 FSPNQQ--KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           FSP +   +  +   + + +L    +        + + +    + +  FS +GK    S 
Sbjct: 640 FSPTRSLTRELFKKEEPQWVLEGPAVGKHWGPLVRTLVDHHDSVHSVAFSRDGKLIA-SG 698

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D+ + ++  D  +   ++        +SA++SPD   I   S+    E + +  +   
Sbjct: 699 SRDKTIKLW--DATTGEVKQTLKGHDYVLSAAFSPDGKLIASGSE---DETIKLWDAATG 753

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +     +          +SP    IA          I +      + +  +E  +    +
Sbjct: 754 EVNHTLEGHSDIISSVAFSPDRKFIASGSRDKT---IKLRDAATGEVKQTLEGHDDTVWS 810

Query: 397 --WSPSGRSLI 405
             +SP G+ + 
Sbjct: 811 IAFSPDGKLIA 821


>gi|116622459|ref|YP_824615.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225621|gb|ABJ84330.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 874

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 58/310 (18%), Positives = 110/310 (35%), Gaps = 23/310 (7%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           + LW   D   ++ + F +S          +S+   +S T E     S          + 
Sbjct: 511 YLLW--VDGNTLLSQAFDASRLELSGAPFPLSEKAGRSTTSESAVSVSSSGKTLAYAGAI 568

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
           +    L   DR G  +  L P  D   F  R SP+  ++A A  D         +     
Sbjct: 569 LNHGRLTWYDRSGKAVGSLAPDGDYTDF--RLSPDNTRLAAALVDPTSSNPGIWLTDLSR 626

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNATERLTNTLFINI 305
            A  R+        AP +S +  R +    ++ A++ Y  S  L  N    LT      +
Sbjct: 627 GATSRLTLDPGFNAAPVWSPDSSRLIFRTMRNGAIEFYQKSASLGGNEEAVLTTDTVRMV 686

Query: 306 SAS--------YSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPV- 353
           + S        +S D   +++++      QL+V+++      + K +     A+      
Sbjct: 687 NGSSVSAMLTDWSSDGRFLIYDTPGLSGSQLWVVENPTLAPGNAKPVRFMSSANALMHAN 746

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +SP G L+A+T      + +       S  + LV  +    P W      + +  +    
Sbjct: 747 FSPDGRLVAYTSNESGTYQVYCQTLPLSNRKWLVSTNGGYEPRWRGDSHEIYYLSE---- 802

Query: 414 TGSKLYSIDL 423
            G +L ++ +
Sbjct: 803 -GRELMAVTV 811



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 86/239 (35%), Gaps = 26/239 (10%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--RSMILAPRFSSNGKRALISVQK-- 278
            + +AYA              T  DR+ K +G+          R S +  R   ++    
Sbjct: 559 GKTLAYAGAILNHGRL-----TWYDRSGKAVGSLAPDGDYTDFRLSPDNTRLAAALVDPT 613

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN---- 334
                I+  DL   AT RLT     N +  +SPDSS+++F + R G  + Y   ++    
Sbjct: 614 SSNPGIWLTDLSRGATSRLTLDPGFNAAPVWSPDSSRLIFRTMRNGAIEFYQKSASLGGN 673

Query: 335 -----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG------SQE 383
                 +D  R+      S     WS  G  + +         + V++            
Sbjct: 674 EEAVLTTDTVRMVNGSSVSAMLTDWSSDGRFLIYDTPGLSGSQLWVVENPTLAPGNAKPV 733

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           R +   + L    +SP GR + ++  + G       ++ L+ R   +     Y  +P+W
Sbjct: 734 RFMSSANALMHANFSPDGRLVAYTSNESGTYQVYCQTLPLSNRKWLVSTNGGY--EPRW 790



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 84/307 (27%), Gaps = 72/307 (23%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L +   D    + L+ +    L  P +SP+ + +A+  + D ++ ++      +      
Sbjct: 357 LWLRPFDDTVAQPLSGTNGASL--PFWSPDGRWIAF--FADGELKKIPAQGGYVQSLATG 412

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-----NTLFINISA 307
           +G+ R    A      G+  L+         I  V        R+               
Sbjct: 413 VGDPRGGTWA------GETILL---GTGNDSIRRVPAAGGPVSRVAATDVARGEGAQRWP 463

Query: 308 SYSPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-------- 354
              PD    ++      +DR     +Y   +    +K ++ D    Y  P +        
Sbjct: 464 QLLPDGVHFLYLLRTHTTDRG----IYAGSAGEKAKKLVTIDSSGIYATPGYLLWVDGNT 519

Query: 355 ---------------SP---------------------QGDLIAFTKFSGEKFAIGVMKK 378
                          +P                      G  +A+         +    +
Sbjct: 520 LLSQAFDASRLELSGAPFPLSEKAGRSTTSESAVSVSSSGKTLAYAGAILNHGRLTWYDR 579

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYA 437
            G     L  D +      SP    L  +      +   ++  DL+ G    L   P + 
Sbjct: 580 SGKAVGSLAPDGDYTDFRLSPDNTRLAAALVDPTSSNPGIWLTDLSRGATSRLTLDPGFN 639

Query: 438 SDPQWVG 444
           + P W  
Sbjct: 640 AAPVWSP 646



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 65/383 (16%), Positives = 116/383 (30%), Gaps = 40/383 (10%)

Query: 78  VFNLISQ--DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
            F +      SF   +    ++P+F    +   + LV   V         +  R +D   
Sbjct: 311 RFAVYPPVNGSFSPSVNTTVAVPQFAV--APDGRSLVF--VAAVAGGTRMLWLRPFDDTV 366

Query: 136 RKQIIGKKFFSSP---ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS------ 186
            + + G    S P      R IA   +D   + I  + G   S    V +          
Sbjct: 367 AQPLSGTNGASLPFWSPDGRWIA-FFADGELKKIPAQGGYVQSLATGVGDPRGGTWAGET 425

Query: 187 ---GIIKNSLCVMDRDGANIRYL----TPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              G   +S+  +   G  +  +        +     P+  P+     Y          +
Sbjct: 426 ILLGTGNDSIRRVPAAGGPVSRVAATDVARGEGAQRWPQLLPDGVHFLYLLRTHTTDRGI 485

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFS--SNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           Y              +   +   P +    +G   L      +A D   ++L S A   L
Sbjct: 486 YAGSAGEKAKKLVTIDSSGIYATPGYLLWVDGNTLL-----SQAFDASRLEL-SGAPFPL 539

Query: 298 TNTLFINI----SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           +     +     + S S     + +        +L     +G     ++ D + + F   
Sbjct: 540 SEKAGRSTTSESAVSVSSSGKTLAYAGAILNHGRLTWYDRSGKAVGSLAPDGDYTDF--R 597

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            SP    +A           G+   D   G+  RL ++     AP WSP    LIF   +
Sbjct: 598 LSPDNTRLAAALVDPTSSNPGIWLTDLSRGATSRLTLDPGFNAAPVWSPDSSRLIFRTMR 657

Query: 411 DGDTGSKLYSIDLNGRNETLINT 433
           +G       S  L G  E ++ T
Sbjct: 658 NGAIEFYQKSASLGGNEEAVLTT 680


>gi|332711358|ref|ZP_08431290.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332349907|gb|EGJ29515.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1381

 Score =  100 bits (250), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 61/365 (16%), Positives = 134/365 (36%), Gaps = 40/365 (10%)

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR--------LWD-VKDRKQIIGKKFFS 146
            +  F  W    A+ +  G +      R  +  R        L + ++  +Q+  ++   
Sbjct: 638 GLVAFMQWKR--AETVSVGHI--NALSRYSLALRKSHQEFDALIEAIRAARQLQKQRRSV 693

Query: 147 SPAS---WRKIAHTISDDIYQSITGE-KGDFNSRILFVSESV--VSGIIKNSLCVMDRDG 200
            P +    R   H     + +         + + + F  +     S    +++ +  R+G
Sbjct: 694 KPETESLVRTALHGAVSWVREYNRLVGHDSWVTSVSFSPDGNLIASASKDHTVKLWSRNG 753

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++ L    +  ++   FSP+ + +A A+ D      V L            G+ R  +
Sbjct: 754 KALQTL-KGHNGTVWNVSFSPDGKTIATASQDK----TVKLWSLDGKNLKTFKGHQRG-V 807

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +  FS +G+    +   D  + ++S++      +          S S+SPD   +    
Sbjct: 808 RSVSFSPDGRMLA-TASNDNTVKLWSLN--GKQLQTFEGIAAGYRSISFSPDGKILA--- 861

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + +   +G       +  +A  +   +SPQG +IA          I +   DG
Sbjct: 862 SAGSNNTIKLWHLDGRSMATF-KGHKAEVYSVSFSPQGKMIASASEDKT---IKLWSLDG 917

Query: 381 SQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            + +   +  + +++  +SP G++L  + +   D   KL+S+D +   +TL    A A D
Sbjct: 918 RELKTFPKKLAGVRSVRFSPDGKTLASASR---DKSVKLWSLDGS-ELQTLRGHQAGAYD 973

Query: 440 PQWVG 444
             +  
Sbjct: 974 LSFSP 978



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 104/258 (40%), Gaps = 38/258 (14%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S    N++ +   DG             ++   FSP  + +A A+ D    ++++ +D R
Sbjct: 862  SAGSNNTIKLWHLDG-RSMATFKGHKAEVYSVSFSPQGKMIASASED--KTIKLWSLDGR 918

Query: 246  -IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             +   PK++   RS+    RFS +GK    S  +D+++ ++S+D   +  + L       
Sbjct: 919  ELKTFPKKLAGVRSV----RFSPDGKTLA-SASRDKSVKLWSLD--GSELQTLRGHQAGA 971

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               S+SPD   +   S+ +   +L+ + +      R  +   ++ +   +SP G  +A  
Sbjct: 972  YDLSFSPDGKTLASASE-DKTIKLWRLDA---KTPRTFKGHRSNVWSVSFSPDGKTLASA 1027

Query: 365  KFSGEK--FAI-GVMKKDGSQERLLVEDSN-----------------LQAPTWSPSGRSL 404
                    + +     K G  ER   +  N                 + + ++SP G+++
Sbjct: 1028 SEDKTAKLWHLDYTCSKQGLGERRSSKTINVLDFCLTPNVLENHRDAVFSVSFSPDGKTI 1087

Query: 405  IFSRKKDGDTGSKLYSID 422
                +   D+  +L+S D
Sbjct: 1088 ATGSR---DSTVRLWSKD 1102



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 107/274 (39%), Gaps = 46/274 (16%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ +G   +++ +  +DG  I+ L   R ++     FSP+ Q +   ++D    ++++ 
Sbjct: 1085 KTIATGSRDSTVRLWSKDGKKIQTLQGHRARVFSV-SFSPDSQTIVSGSWD--QAVKLWS 1141

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--------------- 286
               R  +  K++   R+ + +  FS +G     +   D  + ++S               
Sbjct: 1142 FKGRESQNLKKL---RAAVRSVNFSPDGLMIA-AGSDDNTIKLWSRGNLCNGELKSAKLK 1197

Query: 287  ---------VDLQSN------ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                      D  +N          L     +  S S+SPDS  +V  S+    E + + 
Sbjct: 1198 AANLKAAVGSDHNTNFLPFCLTPTILKGHDDVIWSVSFSPDSQMLVSGSE---DETVKLW 1254

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDS 390
              +G + + + +  +   F   +SP G +IA          + +    G + E L+  + 
Sbjct: 1255 SRDGKEIRTL-KGHQGKVFSVSFSPDGKMIASAS---GDKTVKLWNLKGQEIETLIGHND 1310

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             + + ++SP G+ L  S    G+       I L+
Sbjct: 1311 GVFSLSFSPDGKILA-SSDSSGNVIMWNMDISLD 1343



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 102/312 (32%), Gaps = 62/312 (19%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             + G ++       +++ S     ++ +   D    R     R  + +   FSP+ + +A
Sbjct: 967  HQAGAYDLSFSPDGKTLASASEDKTIKLWRLDAKTPRTFKGHRSNV-WSVSFSPDGKTLA 1025

Query: 228  YATYDD-----------------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             A+ D                  E      +        P  + N R  + +  FS +GK
Sbjct: 1026 SASEDKTAKLWHLDYTCSKQGLGERRSSKTINVLDFCLTPNVLENHRDAVFSVSFSPDGK 1085

Query: 271  RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                +  +D  + ++S D      + L        S S+SPDS  IV  S     + + +
Sbjct: 1086 TIA-TGSRDSTVRLWSKD--GKKIQTLQGHRARVFSVSFSPDSQTIVSGS---WDQAVKL 1139

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG----VMKKDGSQERL- 385
                G + + + + + A+     +SP G +IA          +     +   +    +L 
Sbjct: 1140 WSFKGRESQNLKKLR-AAVRSVNFSPDGLMIAAGS-DDNTIKLWSRGNLCNGELKSAKLK 1197

Query: 386  --------------------LV------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                                L        D  + + ++SP  + L+       D   KL+
Sbjct: 1198 AANLKAAVGSDHNTNFLPFCLTPTILKGHDDVIWSVSFSPDSQMLV---SGSEDETVKLW 1254

Query: 420  SIDLNGRNETLI 431
            S   +G+    +
Sbjct: 1255 S--RDGKEIRTL 1264


>gi|315644874|ref|ZP_07898003.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Paenibacillus vortex V453]
 gi|315279816|gb|EFU43117.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Paenibacillus vortex V453]
          Length = 666

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 93/285 (32%), Gaps = 57/285 (20%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDE---DILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           R   + +P  SP    +AY         D  R ++                    AP +S
Sbjct: 14  RMHWVNDPVVSPASGAIAYVHKSVSEKFDGYRSHIRLLPTVGTQDIPFTSGEADAAPAWS 73

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES------ 320
            +G       +K +   I+ +         +T+      +  +SPDS++++  S      
Sbjct: 74  PDGSELAFLRKKGDKPQIWIMPANGGEARPVTDMKHGVSAFKWSPDSTRLLIRSEAEAAE 133

Query: 321 ----------------------------DREG-----KEQLYVMQSNGSDQKRISQDKEA 347
                                       D  G     +  LY++     + K+I+ D + 
Sbjct: 134 STESEDQGKDDKNKLPEEKIINRIKYKADGGGLWNGRRNHLYIVNPATEECKQIT-DGDY 192

Query: 348 SYFDPVWSPQGDLIAFT-KFSGEKF---------AIGVMKKDGSQERLLVEDSN-LQAPT 396
             +   WSP G  IA++   + E+F          + VM         + + +  + +  
Sbjct: 193 DVYAFAWSPDGGHIAYSNSLATEQFPDPDLRLTNDVFVMDLTDKSVTEITDGTLSIGSIV 252

Query: 397 WSPSGRSLIFSRKK---DGDTGSKLYSIDLNGRNETLINTPAYAS 438
           ++P G+ ++           T +K++ + L+G    ++ T     
Sbjct: 253 FTPDGQYVLMLASDLSCGFATLTKIHLVPLSGGESRVLFTDMDVQ 297



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/355 (13%), Positives = 111/355 (31%), Gaps = 81/355 (22%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           +  K+  +    +R   H ++D +           +  I +V +SV          +   
Sbjct: 1   MTDKRLITPEDLYRM--HWVNDPVVS-------PASGAIAYVHKSVSEKFDGYRSHIRLL 51

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
                + +  +  +    P +SP+  ++A+      D  ++++M        + + + + 
Sbjct: 52  PTVGTQDIPFTSGEADAAPAWSPDGSELAFLR-KKGDKPQIWIMPAN-GGEARPVTDMKH 109

Query: 259 MILAPRFSSNGKRALISVQ---------------------------------------KD 279
            + A ++S +  R LI  +                                         
Sbjct: 110 GVSAFKWSPDSTRLLIRSEAEAAESTESEDQGKDDKNKLPEEKIINRIKYKADGGGLWNG 169

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----------DREGKEQLY 329
               +Y V+  +   +++T+  +   + ++SPD   I + +          D      ++
Sbjct: 170 RRNHLYIVNPATEECKQITDGDYDVYAFAWSPDGGHIAYSNSLATEQFPDPDLRLTNDVF 229

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQER 384
           VM         I+ D   S    V++P G  +                I ++   G + R
Sbjct: 230 VMDLTDKSVTEIT-DGTLSIGSIVFTPDGQYVLMLASDLSCGFATLTKIHLVPLSGGESR 288

Query: 385 LLVED---------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +L  D                    P +S  G+S+     +DG      +++D +
Sbjct: 289 VLFTDMDVQLGHAAVSDMRSGAGTPPLFSKDGQSVYLQLSQDGGVHIGRFALDGS 343



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 100/316 (31%), Gaps = 73/316 (23%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-------------- 230
                K  + +M  +G   R +T  +  +    ++SP+  ++   +              
Sbjct: 83  RKKGDKPQIWIMPANGGEARPVTDMKHGVSAF-KWSPDSTRLLIRSEAEAAESTESEDQG 141

Query: 231 ------------------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                                     +     +Y+++   +   K+I +    + A  +S
Sbjct: 142 KDDKNKLPEEKIINRIKYKADGGGLWNGRRNHLYIVNPATEEC-KQITDGDYDVYAFAWS 200

Query: 267 SNGKRALISVQ------KDEAM----DIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            +G     S         D  +    D++ +DL   +   +T+      S  ++PD   +
Sbjct: 201 PDGGHIAYSNSLATEQFPDPDLRLTNDVFVMDLTDKSVTEITDGTLSIGSIVFTPDGQYV 260

Query: 317 VF-ESDRE----GKEQLYVMQSNGSDQKRISQD-------------KEASYFDPVWSPQG 358
           +   SD         +++++  +G + + +  D             +  +   P++S  G
Sbjct: 261 LMLASDLSCGFATLTKIHLVPLSGGESRVLFTDMDVQLGHAAVSDMRSGAGTPPLFSKDG 320

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS--PSGRSLIFSRKKDGDTGS 416
             +           IG    DGS   L+V     +   ++  P   ++IF+       G 
Sbjct: 321 QSVYLQLSQDGGVHIGRFALDGSSFDLVV-SGEREVYQFALTP-EDTIIFAAADLLQPG- 377

Query: 417 KLYSIDLNGRNETLIN 432
            L+S       E  + 
Sbjct: 378 DLFSYSAAEDKERRLT 393



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 54/149 (36%), Gaps = 4/149 (2%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSN 292
               RV   D  +      + + RS    P  FS +G+   + + +D  + I    L  +
Sbjct: 284 GGESRVLFTDMDVQLGHAAVSDMRSGAGTPPLFSKDGQSVYLQLSQDGGVHIGRFALDGS 343

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           + + + +        + +P+ + I   +D      L+   +    ++R++   E  + + 
Sbjct: 344 SFDLVVSGEREVYQFALTPEDTIIFAAADLLQPGDLFSYSAAEDKERRLTHCNEELWNEI 403

Query: 353 VWS-PQGDLIAFTKFSGEKFAIGVMKKDG 380
             S P  +   F    G      +MK  G
Sbjct: 404 TLSTP--ESFTFHTSDGWPIQGWIMKPAG 430


>gi|297530850|ref|YP_003672125.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. C56-T3]
 gi|297254102|gb|ADI27548.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. C56-T3]
          Length = 673

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 81/237 (34%), Gaps = 52/237 (21%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYS----VDLQSNATERLTNTLFINISASYSPDSS 314
            +  P ++ +G RA+   +  +    Y     +     +  + T   + ++   +SP   
Sbjct: 23  SVRDPHYAPDGTRAVFVEKSIDEEKQYRSHLWLWAADGSVRQWTFGRWRDMKPRFSPRGE 82

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA------------ 362
            I F SDR G+ QL+++ +NG + ++++  K     D VWSP G  +             
Sbjct: 83  MIAFLSDRSGRTQLWLLPANGGEARQLTFFKNG-VRDYVWSPDGTFLIALTTLGDEETIE 141

Query: 363 -----------------------FTKFSGEKFAIGVMK-------KDGSQERLLVEDSNL 392
                                  + K     F  G            G  E L   +  +
Sbjct: 142 DREEQKTAEQKPADSKPRVVERLYYKSDASGFLDGKQDVLVRIDAASGKNEALTGREEEI 201

Query: 393 QAPTWSPSGRSLIFSRKKDGD----TGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
            +   SP GR+L F   ++ D        +  +DL  + ET L N     +   W  
Sbjct: 202 GSFAISPDGRTLAFVANRNEDPDTTFTRDIVLLDLESKAETNLTNGCGTFASLAWSP 258



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 87/276 (31%), Gaps = 54/276 (19%)

Query: 210 RDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           R + + +P ++P+  +  +   + D+E   R +L     D + ++    R   + PRFS 
Sbjct: 20  RLRSVRDPHYAPDGTRAVFVEKSIDEEKQYRSHLWLWAADGSVRQWTFGRWRDMKPRFSP 79

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS------------- 314
            G+       +     ++ +        +LT          +SPD +             
Sbjct: 80  RGEMIAFLSDRSGRTQLWLLPANGGEARQLTFFKNGVRDYVWSPDGTFLIALTTLGDEET 139

Query: 315 -----------------------QIVFESDREG-----KEQLYVMQSNGSDQKRISQDKE 346
                                  ++ ++SD  G     ++ L  + +     + ++  +E
Sbjct: 140 IEDREEQKTAEQKPADSKPRVVERLYYKSDASGFLDGKQDVLVRIDAASGKNEALT-GRE 198

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
                   SP G  +AF     E         I ++  +   E  L        +  WSP
Sbjct: 199 EEIGSFAISPDGRTLAFVANRNEDPDTTFTRDIVLLDLESKAETNLTNGCGTFASLAWSP 258

Query: 400 SGRSLIFSRK---KDGDTGSKLYSIDLNGRNETLIN 432
            G  L          G T  +LY  +     + ++ 
Sbjct: 259 DGTKLAAIGHDLAYLGATLHRLYVFEPERGTKRVLT 294



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 50/309 (16%), Positives = 97/309 (31%), Gaps = 67/309 (21%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-------------------- 227
             +  L ++  +G   R LT  ++ +     +SP+   +                     
Sbjct: 91  SGRTQLWLLPANGGEARQLTFFKNGVRDY-VWSPDGTFLIALTTLGDEETIEDREEQKTA 149

Query: 228 ---------------YATYDDEDILR----VYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                          Y   D    L     V +         + +      I +   S +
Sbjct: 150 EQKPADSKPRVVERLYYKSDASGFLDGKQDVLVRIDAASGKNEALTGREEEIGSFAISPD 209

Query: 269 GKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD- 321
           G+       ++E  D      I  +DL+S A   LTN      S ++SPD +++      
Sbjct: 210 GRTLAFVANRNEDPDTTFTRDIVLLDLESKAETNLTNGCGTFASLAWSPDGTKLAAIGHD 269

Query: 322 ----REGKEQLYVMQSNGSDQKRISQDKEASYFD--------------PVWSPQGDLIAF 363
                    +LYV +     ++ ++ D +    D              P+W+  G  +  
Sbjct: 270 LAYLGATLHRLYVFEPERGTKRVLTADWDVHLGDAMVGDTHADAKGPGPIWASDGSGLYV 329

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           T     +  +  +  DG    ++  D +L   T  P+GR    +      +   LY++ L
Sbjct: 330 TASERGRVNLYFVPLDGPIVPVIEGDFHLYGFTVHPNGRQ-AVAAISSPTSVGDLYAVSL 388

Query: 424 -NGRNETLI 431
            +G    L 
Sbjct: 389 ADGTKTRLT 397



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 70/227 (30%), Gaps = 30/227 (13%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT- 244
            G     + +    G N       R++ +     SP+ + +A+    +ED    +  D  
Sbjct: 175 DGKQDVLVRIDAASGKNE--ALTGREEEIGSFAISPDGRTLAFVANRNEDPDTTFTRDIV 232

Query: 245 ---RIDRAPKRIGNFRSMILAPRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATER 296
                 +A   + N      +  +S +G +       ++        +Y  + +      
Sbjct: 233 LLDLESKAETNLTNGCGTFASLAWSPDGTKLAAIGHDLAYLGATLHRLYVFEPERGTKRV 292

Query: 297 LTNTLFI--------NI-------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           LT    +        +           ++ D S +   +   G+  LY +  +G     I
Sbjct: 293 LTADWDVHLGDAMVGDTHADAKGPGPIWASDGSGLYVTASERGRVNLYFVPLDGPIVPVI 352

Query: 342 SQDKEASYFDPVWSPQGDL-IAFTKFSGEKFAIGVMKK-DGSQERLL 386
             + +   +     P G   +A          +  +   DG++ RL 
Sbjct: 353 --EGDFHLYGFTVHPNGRQAVAAISSPTSVGDLYAVSLADGTKTRLT 397


>gi|332662646|ref|YP_004445434.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
 gi|332331460|gb|AEE48561.1| peptidase S41 [Haliscomenobacter hydrossis DSM 1100]
          Length = 1048

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 6/163 (3%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +N      +       P  SP+   + +A     DI +V    +       R+       
Sbjct: 17  SNAFTQDKNAVYFTDHPALSPDGNTLYFAY--AGDIWKV----SAAGGLATRLTAMEGDE 70

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
             PR S +GK    S Q+    D+Y + L+     +LT     ++  S+S DS  I F S
Sbjct: 71  RFPRPSPDGKWLAFSAQQFGNTDVYLLPLEGGEIRQLTYHDANDLVCSWSWDSGFIYFTS 130

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            R  +   Y +   G    R+  +   +  D    P+G  I F
Sbjct: 131 GRYNRVSGYKVSVEGGTPMRMFPNYHHTVHDIAEHPRGGEIFF 173



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 81/214 (37%), Gaps = 18/214 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + +K+A+         +V++ D +               L   +  + K  L +    
Sbjct: 319 SDDGKKMAFVARG-----QVFVADVKGKFIQHLPTRAEGRALEIHWLKDNKTLLFTQTVG 373

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + +++        ++LT  L  N S +++ D ++ V+ +   G+ ++ ++  N    
Sbjct: 374 GYQNWFTLPADGSGTEKQLTQDLHNNRSLAFNSDKTKAVYLA---GRHEMRLLDLNTFTS 430

Query: 339 KRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-P 395
             + +D+        P + P    I +T +   +  I V   D  + + L      +A P
Sbjct: 431 STLLKDEFWDIGSDEPQFGPDDKHILYTAYRNFERDILVYNLDTKKSQNLTTTGVTEAGP 490

Query: 396 TWSPSGRSLIFS------RKKDGDTGSKLYSIDL 423
            W+  G+++ F           G   + LYS+ L
Sbjct: 491 RWAHDGKTIYFYGNLTQPSYPFGLGDADLYSLPL 524



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 50/147 (34%), Gaps = 7/147 (4%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            P  S +G     +   D    I+ V        RLT           SPD   + F + 
Sbjct: 32  HPALSPDGNTLYFAYAGD----IWKVSAAGGLATRLTAMEGDERFPRPSPDGKWLAFSAQ 87

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           + G   +Y++   G + ++++   +A+     WS     I FT     + +   +  +G 
Sbjct: 88  QFGNTDVYLLPLEGGEIRQLTY-HDANDLVCSWSWDSGFIYFTSGRYNRVSGYKVSVEGG 146

Query: 382 QERLLVEDSNL--QAPTWSPSGRSLIF 406
               +  + +         P G  + F
Sbjct: 147 TPMRMFPNYHHTVHDIAEHPRGGEIFF 173



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 97/254 (38%), Gaps = 24/254 (9%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR--IDRAPKRIG------- 254
           +         ++ P+ S N +KVA+       +  V    T     R P+ +        
Sbjct: 248 KVRLTDFPNSIWYPQASANGEKVAFRRNYQIQVYDVKKKRTESVTIRIPQNVTLDQLQDF 307

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDS 313
           N +  I A   S +GK+     +      ++  D++    + L T      +   +  D+
Sbjct: 308 NVKGNISAFNVSDDGKKMAFVARG----QVFVADVKGKFIQHLPTRAEGRALEIHWLKDN 363

Query: 314 SQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             ++F     G +  + + ++GS  +K+++QD   +     ++       +      +  
Sbjct: 364 KTLLFTQTVGGYQNWFTLPADGSGTEKQLTQDL-HNNRSLAFNSDKTKAVYLA---GRHE 419

Query: 373 IGVMKKDGSQERLLVEDSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           + ++  +      L++D         P + P  + ++++  ++ +    +Y++D   +++
Sbjct: 420 MRLLDLNTFTSSTLLKDEFWDIGSDEPQFGPDDKHILYTAYRNFERDILVYNLD-TKKSQ 478

Query: 429 TLINTPAYASDPQW 442
            L  T    + P+W
Sbjct: 479 NLTTTGVTEAGPRW 492



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 8/124 (6%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              + SPD + + F         ++ + + G    R++   E     P  SP G  +AF+
Sbjct: 31  DHPALSPDGNTLYFAY----AGDIWKVSAAGGLATRLTAM-EGDERFPRPSPDGKWLAFS 85

Query: 365 KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   + ++  +G + R L   D+N    +WS     + F+  +        Y + +
Sbjct: 86  AQQFGNTDVYLLPLEGGEIRQLTYHDANDLVCSWSWDSGFIYFTSGRYNRVSG--YKVSV 143

Query: 424 NGRN 427
            G  
Sbjct: 144 EGGT 147



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/291 (12%), Positives = 86/291 (29%), Gaps = 42/291 (14%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
              ++S  ++ +    +   + S   +  +G     + P+    + +    P   ++ + 
Sbjct: 118 SWSWDSGFIYFTSGRYN---RVSGYKVSVEGGTPMRMFPNYHHTVHDIAEHPRGGEIFFN 174

Query: 230 T------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
                        Y  +    V   + R     K+  N+        F   G    IS +
Sbjct: 175 ESWESFNNISRKGYKGDHNPEVQSFNPRSGEF-KQYTNWNGKDFGVTFDRQGSFYFISDE 233

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            +   ++Y+V+ +     RLT+          S +  ++ F        Q+ V       
Sbjct: 234 FNGEYNLYTVEKE--RKVRLTDFPNSIWYPQASANGEKVAFRR----NYQIQVYDVKKKR 287

Query: 338 QKRIS--------------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            + ++               + + +      S  G  +AF         + V    G   
Sbjct: 288 TESVTIRIPQNVTLDQLQDFNVKGNISAFNVSDDGKKMAFVARG----QVFVADVKGKFI 343

Query: 384 RLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + L    +       W    ++L+F++   G         D +G  + L  
Sbjct: 344 QHLPTRAEGRALEIHWLKDNKTLLFTQTVGGYQNWFTLPADGSGTEKQLTQ 394



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 2/125 (1%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             +  DG+                 F+ ++ K  Y     E  +R+  ++T       + 
Sbjct: 379 FTLPADGSGTEKQLTQDLHNNRSLAFNSDKTKAVYLAGRHE--MRLLDLNTFTSSTLLKD 436

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             +      P+F  + K  L +  ++   DI   +L +  ++ LT T        ++ D 
Sbjct: 437 EFWDIGSDEPQFGPDDKHILYTAYRNFERDILVYNLDTKKSQNLTTTGVTEAGPRWAHDG 496

Query: 314 SQIVF 318
             I F
Sbjct: 497 KTIYF 501


>gi|24372890|ref|NP_716932.1| TolB domain-containing protein [Shewanella oneidensis MR-1]
 gi|24347011|gb|AAN54377.1|AE015575_3 TolB domain protein [Shewanella oneidensis MR-1]
          Length = 413

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 82/225 (36%), Gaps = 46/225 (20%)

Query: 264 RFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            +S +G+   I+ +    + DI+  DL S   +RLT  L      S++PDS  +VF ++ 
Sbjct: 33  AYSPDGRWLAIARRFSNISEDIFIRDLASAHEKRLTQGLEDIRGLSWTPDSQALVFATED 92

Query: 323 EGKEQLYVMQSNGSDQKRISQDK------------------------------------- 345
            G    + +  N +  + +  +                                      
Sbjct: 93  SGSSNGFTLDINTAQIRSLDVEGMSYPSSVSAEGELVYHQYHRQFQMAYFSLGDKVPGSL 152

Query: 346 ------EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWS 398
                   S+ +P +SP+   I F         I     +G +   L +  S +  P WS
Sbjct: 153 FPLLYSGVSHRNPDYSPEAKRIVFVSSETGYNEIWTSDINGQKLEQLTQLKSRVAYPRWS 212

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQW 442
           P G  + F    D + G++++ +DL  +N T + +  +    P W
Sbjct: 213 PDGSRIAFIAPDDRNEGNRIFILDLTNKNITALASSYHNHGRPSW 257



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 54/284 (19%), Positives = 110/284 (38%), Gaps = 18/284 (6%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           Q +   +G   +               ++   +D + A IR L    + + +    S   
Sbjct: 69  QGLEDIRGLSWTPDSQALVFATEDSGSSNGFTLDINTAQIRSL--DVEGMSYPSSVSAEG 126

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            ++ Y  Y  +  +  + +  ++  +   +         P +S   KR +    +    +
Sbjct: 127 -ELVYHQYHRQFQMAYFSLGDKVPGSLFPLLYSGVSHRNPDYSPEAKRIVFVSSETGYNE 185

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRI 341
           I++ D+     E+LT          +SPD S+I F +  DR    +++++     +   +
Sbjct: 186 IWTSDINGQKLEQLTQLKSRVAYPRWSPDGSRIAFIAPDDRNEGNRIFILDLTNKNITAL 245

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           +     ++  P W+ QG  +  +   G    I     D    R++   S   A  ++ S 
Sbjct: 246 AS-SYHNHGRPSWNWQGTAVLASTADG----ITEFYLDNRAPRVI--SSLSMAVGFAKSA 298

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNG--RNETLINTPAYASDPQWV 443
             L+FS  +DG+ G  L+ I+L      E LI+T A+ +   WV
Sbjct: 299 TELVFS--RDGENG--LWQINLTQPEHVEQLISTDAFRAGNNWV 338



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 70/213 (32%), Gaps = 55/213 (25%)

Query: 284 IYSVDLQSNATE--RL---TNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSD 337
           IY + L+S      RL   T   + +   +YSPD   +          E +++     + 
Sbjct: 4   IYRLSLKSTEATAERLSCDTRCNYEDRDLAYSPDGRWLAIARRFSNISEDIFIRDLASAH 63

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER------------- 384
           +KR++Q  E       W+P    + F            +  + +Q R             
Sbjct: 64  EKRLTQGLE-DIRGLSWTPDSQALVFATEDSGSSNGFTLDINTAQIRSLDVEGMSYPSSV 122

Query: 385 --------------------------------LLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
                                           LL    + + P +SP  + ++F   + G
Sbjct: 123 SAEGELVYHQYHRQFQMAYFSLGDKVPGSLFPLLYSGVSHRNPDYSPEAKRIVFVSSETG 182

Query: 413 DTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
              +++++ D+NG+  E L    +  + P+W  
Sbjct: 183 --YNEIWTSDINGQKLEQLTQLKSRVAYPRWSP 213


>gi|67902962|ref|XP_681737.1| hypothetical protein AN8468.2 [Aspergillus nidulans FGSC A4]
 gi|40747934|gb|EAA67090.1| hypothetical protein AN8468.2 [Aspergillus nidulans FGSC A4]
 gi|259484414|tpe|CBF80614.1| TPA: NACHT and WD40 domain protein (AFU_orthologue; AFUA_7G08500)
            [Aspergillus nidulans FGSC A4]
          Length = 1364

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 104/275 (37%), Gaps = 21/275 (7%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSL 193
            D K +      S+   W    +  + ++ QS+ G  G   S       + + SG  KN++
Sbjct: 887  DGKLLASSSLDSTIKVW----NPATGELQQSLEGRSGWVKSVAFSPDGKKLASGSEKNTV 942

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             + +     +        Q +    FSP+ +++A ++ D      + L ++      +  
Sbjct: 943  KLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSSDT----TIKLWNSTTGELQQTF 998

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPD 312
                  I A  FS +GK  + S   D  + ++  DL ++  ++ L +      + ++SPD
Sbjct: 999  KGHDLWIRAVAFSPDGKHLV-SGSDDNTIKLW--DLATSELQQSLEDHSRSVHAVAFSPD 1055

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              Q+   S       + +  S   + +R  +          +SP G L+A   + G    
Sbjct: 1056 DKQLASSSL---DSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDGT--- 1109

Query: 373  IGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
            I +      + +  +   +    +  +SP G+ L 
Sbjct: 1110 IKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLA 1144



 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 90/248 (36%), Gaps = 20/248 (8%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG   +++ + D     +          +    FSP+ + +A  +YD+     + L D+
Sbjct: 766 VSGSYDDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDN----TIDLWDS 821

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
                 +        I +  F+ +GK    S   D  + I+  DL +   ++ L +    
Sbjct: 822 ATGELLQTFEGHPHSIWSVAFAPDGKELA-SASDDSTIKIW--DLATGELQQTLDSHSQS 878

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SPD   +   S       + V      + ++  + +        +SP G  +A 
Sbjct: 879 VRSVAFSPDGKLLASSSL---DSTIKVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLAS 935

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    + +      +    +E    ++++  +SP G+ L  S     DT  KL++ 
Sbjct: 936 GSEKNT---VKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQLASSSS---DTTIKLWN- 988

Query: 422 DLNGRNET 429
              G  + 
Sbjct: 989 STTGELQQ 996



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 59/370 (15%), Positives = 128/370 (34%), Gaps = 37/370 (10%)

Query: 75   RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            RS     ++     +K+ +       + WN    ++L T  +    +    V F      
Sbjct: 917  RSGWVKSVAFSPDGKKLASGSEKNTVKLWNPATGELLQT--LEGHSQSVRSVAFS----P 970

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV--VSGIIKNS 192
            D KQ+      ++   W      +     Q        +   + F  +    VSG   N+
Sbjct: 971  DGKQLASSSSDTTIKLWNSTTGEL-----QQTFKGHDLWIRAVAFSPDGKHLVSGSDDNT 1025

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            + + D   + ++       + +    FSP+ +++A ++ D      + L D+      + 
Sbjct: 1026 IKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSLDS----TIKLWDSATGELQRT 1081

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSP 311
            +      + +  FS +GK    S   D  + ++  +  +   ++ LT       S ++SP
Sbjct: 1082 LEGHSQGVRSVTFSPDGKLLA-SNSYDGTIKLW--NPLTGELQQTLTGRSDWVDSVAFSP 1138

Query: 312  DSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            D  Q+       G     + +  S   +  +  +         V+SP G L+A   +   
Sbjct: 1139 DGKQLA-----SGYYDSTIKLWDSATGELLQTLEGHSDRIQSVVFSPDGKLLASGSYDQT 1193

Query: 370  KFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                 +      +   + E  +  +++  +SP G+ L  S         KL+   + G  
Sbjct: 1194 A---KLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASSSY---GETIKLWD-PVTGEL 1246

Query: 428  ETLINTPAYA 437
               +N P  +
Sbjct: 1247 LQTLNDPDES 1256



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 104/315 (33%), Gaps = 43/315 (13%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                      LWD    + +  + F   P S           I+       G        
Sbjct: 808  ASGSYDNTIDLWDSATGELL--QTFEGHPHS-----------IWSVAFAPDG-------- 846

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              + + S    +++ + D     ++    S  Q +    FSP+ + +A ++ D      +
Sbjct: 847  --KELASASDDSTIKIWDLATGELQQTLDSHSQSVRSVAFSPDGKLLASSSLDS----TI 900

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
             + +       + +      + +  FS +GK+   S  +   + ++  +  +    + L 
Sbjct: 901  KVWNPATGELQQSLEGRSGWVKSVAFSPDGKKLA-SGSEKNTVKLW--NPATGELLQTLE 957

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   S ++SPD  Q+   S       + +  S   + ++  +  +       +SP G
Sbjct: 958  GHSQSVRSVAFSPDGKQLASSSS---DTTIKLWNSTTGELQQTFKGHDLWIRAVAFSPDG 1014

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGS 416
              +           I +     S+ +  +ED   ++ A  +SP  + L  S     D+  
Sbjct: 1015 KHLVSGSDDNT---IKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQLASSSL---DSTI 1068

Query: 417  KLYSIDLNGRNETLI 431
            KL+     G  +  +
Sbjct: 1069 KLWD-SATGELQRTL 1082



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 77/223 (34%), Gaps = 16/223 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S  + +++ + D     ++       Q +    FSP+ + +A  +YD      + L +  
Sbjct: 1061 SSSLDSTIKLWDSATGELQRTLEGHSQGVRSVTFSPDGKLLASNSYDG----TIKLWNPL 1116

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                 + +      + +  FS +GK+   S   D  + ++  D  +    + L       
Sbjct: 1117 TGELQQTLTGRSDWVDSVAFSPDGKQLA-SGYYDSTIKLW--DSATGELLQTLEGHSDRI 1173

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S  +SPD   +   S     +   +      +  +I +          +SP G L+A +
Sbjct: 1174 QSVVFSPDGKLLASGSY---DQTAKLWDPATGELLQIFEGHSKWVESVAFSPDGKLLASS 1230

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
             +      I +      +    + D +    +  +SP G  L 
Sbjct: 1231 SYGET---IKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLA 1270



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 85/247 (34%), Gaps = 27/247 (10%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQ---Q 224
           R +   +S +     + L     D    R++  +R      P         FSP     +
Sbjct: 662 RAICRLQSGIQDDKDSELSKFLYD--ARRFVLNNRHLAETAPLQLYSSGLMFSPEGSITR 719

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++    Y+     ++  ++       + + N    + +  FS +GK+ + S   D+ + I
Sbjct: 720 RIF--NYNLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLV-SGSYDDTVKI 776

Query: 285 YSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +  D  +    + L        S ++SPD   +   S       + +  S   +  +  +
Sbjct: 777 W--DPATGELLQTLDGHSGTVESLAFSPDGKLLASGSY---DNTIDLWDSATGELLQTFE 831

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSG 401
               S +   ++P G  +A          I +      + +        ++++  +SP G
Sbjct: 832 GHPHSIWSVAFAPDGKELASASDDST---IKIWDLATGELQQTLDSHSQSVRSVAFSPDG 888

Query: 402 RSLIFSR 408
           + L  S 
Sbjct: 889 KLLASSS 895



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 76/220 (34%), Gaps = 17/220 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ + +     ++     R   +    FSP+ +++A   YD      + L D+ 
Sbjct: 1103 SNSYDGTIKLWNPLTGELQQTLTGRSDWVDSVAFSPDGKQLASGYYDS----TIKLWDSA 1158

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-IN 304
                 + +      I +  FS +GK    S   D+   ++  D  +    ++        
Sbjct: 1159 TGELLQTLEGHSDRIQSVVFSPDGKLLA-SGSYDQTAKLW--DPATGELLQIFEGHSKWV 1215

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++SPD   +   S     E + +      +  +   D + S     +SP G+ +A  
Sbjct: 1216 ESVAFSPDGKLLASSSY---GETIKLWDPVTGELLQTLNDPDESAGSVAFSPDGNRLASV 1272

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                + F   +      +    ++  +     WS +G  +
Sbjct: 1273 ----DIFDTKIWDPATGELLQALKGHSKW--VWSRTGAGI 1306



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 66/178 (37%), Gaps = 15/178 (8%)

Query: 265 FSSNG--KRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
           FS  G   R + +        +  V+   +A ++ L N L    S  +SPD  Q+V  S 
Sbjct: 711 FSPEGSITRRIFNYNLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVFSPDGKQLVSGSY 770

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               + + +      +  +       +     +SP G L+A   +      I +      
Sbjct: 771 ---DDTVKIWDPATGELLQTLDGHSGTVESLAFSPDGKLLASGSYDNT---IDLWDSATG 824

Query: 382 QERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           +     E    ++ +  ++P G+ L  +     D+  K++ +   G  +  +++ + +
Sbjct: 825 ELLQTFEGHPHSIWSVAFAPDGKELASASD---DSTIKIWDL-ATGELQQTLDSHSQS 878


>gi|326424405|ref|NP_763403.2| protease-like protein [Vibrio vulnificus CMCP6]
 gi|319999795|gb|AAO08393.2| Protease-related protein [Vibrio vulnificus CMCP6]
          Length = 1088

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 84/236 (35%), Gaps = 31/236 (13%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             T S+   L +   SP+ Q++A+         +++L+ ++   A   + +  S    P 
Sbjct: 32  TTTNSQPTWLRDIALSPDGQRIAFTYAG-----QIWLIASKGGEAI-PLTSADSYSENPI 85

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G+    +  +    D++ V       +RLT     ++  ++SPD  ++ F S R G
Sbjct: 86  WSPDGESIAFTTDRFGPGDVFLVSANGGDAKRLTYHFSKDVPYAFSPDGQEVYFRSSRIG 145

Query: 325 --------------KEQLYVMQSNGSDQKRISQDKEAS----------YFDPVWSPQGDL 360
                           Q+Y +  +G  +K +  +  +S           +  + SP    
Sbjct: 146 DIESSVNNGFAGSASAQIYSVDVSGGREKLLLANPISSLSINGQTGEYLYTDLPSPMEQE 205

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                 S     I        +   L       +   W+  GRS+ +  ++ G   
Sbjct: 206 WRKRDVSDAARDIWRFDPKTGKHTKLTNYRGEDRNAVWAEDGRSMFYLSERSGSFN 261



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 24/147 (16%)

Query: 304 NISASY------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           N   ++      SPD  +I F        Q++++ S G +   ++     S  +P+WSP 
Sbjct: 35  NSQPTWLRDIALSPDGQRIAFTY----AGQIWLIASKGGEAIPLTSADSYSE-NPIWSPD 89

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKK------ 410
           G+ IAFT        + ++  +G   + L    +   P  +SP G+ + F   +      
Sbjct: 90  GESIAFTTDRFGPGDVFLVSANGGDAKRLTYHFSKDVPYAFSPDGQEVYFRSSRIGDIES 149

Query: 411 ------DGDTGSKLYSIDLNGRNETLI 431
                  G   +++YS+D++G  E L+
Sbjct: 150 SVNNGFAGSASAQIYSVDVSGGREKLL 176



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 82/224 (36%), Gaps = 26/224 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP   +VA     D     VY++        KR+           FS++G   L + +
Sbjct: 343 AVSPVAPEVAIVARGD-----VYVVSLLSG-VTKRVTKTPQAERYLSFSNDGLSLLYASE 396

Query: 278 KDEAMDIY--SVDLQSNA--------TERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           ++   D++   ++    +         E+L++         YSPD ++I +   RE    
Sbjct: 397 RNGNWDVFHSYINDTGRSFSTSFDVVEEQLSDEAVDQTQPLYSPDGTKIAY---RENSNS 453

Query: 328 LYVMQS-NGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           + V    N S    +   +  SY D      WSP    +     +     I ++K DGS+
Sbjct: 454 IKVYDIENDSYHVLLDSSQLYSYVDQDLSYEWSPDSQYLVTRNRASYNADIVLLKADGSE 513

Query: 383 --ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              ++         P +S  G+ + +S  ++       +++  +
Sbjct: 514 KPLQITNTGFIEGEPKFSHDGQMIYWSTDRNSLRDIDKWAVQSD 557



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 62/376 (16%), Positives = 122/376 (32%), Gaps = 101/376 (26%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S D Y        D  S I F ++    G     + ++  +G + + LT    + +    
Sbjct: 76  SADSYSENPIWSPDGES-IAFTTDRFGPG----DVFLVSANGGDAKRLTYHFSKDVPY-A 129

Query: 219 FSPNQQKVAYATYDDEDI-------------LRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           FSP+ Q+V + +    DI              ++Y +D    R    + N  S       
Sbjct: 130 FSPDGQEVYFRSSRIGDIESSVNNGFAGSASAQIYSVDVSGGREKLLLANPIS-----SL 184

Query: 266 SSNGKRALISVQK---------------DEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           S NG+                       D A DI+  D ++    +LTN    + +A ++
Sbjct: 185 SINGQTGEYLYTDLPSPMEQEWRKRDVSDAARDIWRFDPKTGKHTKLTNYRGEDRNAVWA 244

Query: 311 PDSSQIVFESDREGKEQLY--VMQSNGSDQKRISQDKEASYFDPVWSPQGDL-------- 360
            D   + + S+R G   ++  V+    ++  +I+Q +         S QGDL        
Sbjct: 245 EDGRSMFYLSERSGSFNVWQRVLSDPSAEPVQITQHEFLPVRFLSISQQGDLAYGYDGDI 304

Query: 361 -------------------------------------IAFTKFSGE-----KFAIGVMKK 378
                                                IA +  + E     +  + V+  
Sbjct: 305 WFKGKDEADAKPLQVTIRQSFLSKGKRFVNLNHEATEIAVSPVAPEVAIVARGDVYVVSL 364

Query: 379 DGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR---------NE 428
                + + +    +   ++S  G SL+++ +++G+       I+  GR          E
Sbjct: 365 LSGVTKRVTKTPQAERYLSFSNDGLSLLYASERNGNWDVFHSYINDTGRSFSTSFDVVEE 424

Query: 429 TLINTPAYASDPQWVG 444
            L +     + P +  
Sbjct: 425 QLSDEAVDQTQPLYSP 440



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 78/199 (39%), Gaps = 29/199 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S       I  + D    +Y V L S  T+R+T T       S+S D   +++ S+R 
Sbjct: 343 AVSPVAPEVAIVARGD----VYVVSLLSGVTKRVTKTPQAERYLSFSNDGLSLLYASERN 398

Query: 324 GKEQLYVMQSNGSD----------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           G   ++    N +           ++++S D+      P++SP G  IA+ + S     I
Sbjct: 399 GNWDVFHSYINDTGRSFSTSFDVVEEQLS-DEAVDQTQPLYSPDGTKIAYRENSNS---I 454

Query: 374 GVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGDTGSKLYSIDLNG- 425
            V   +     +L++ S L +         WSP  + L+   +      + +  +  +G 
Sbjct: 455 KVYDIENDSYHVLLDSSQLYSYVDQDLSYEWSPDSQYLV--TRNRASYNADIVLLKADGS 512

Query: 426 -RNETLINTPAYASDPQWV 443
            +   + NT     +P++ 
Sbjct: 513 EKPLQITNTGFIEGEPKFS 531



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 14/112 (12%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPS 400
           +  +     D   SP G  IAFT        I ++   G +   L   DS  + P WSP 
Sbjct: 34  TNSQPTWLRDIALSPDGQRIAFTYAG----QIWLIASKGGEAIPLTSADSYSENPIWSPD 89

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-------AYASDPQWVGF 445
           G S+ F+  + G     ++ +  NG +   +          A++ D Q V F
Sbjct: 90  GESIAFTTDRFGPG--DVFLVSANGGDAKRLTYHFSKDVPYAFSPDGQEVYF 139



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 46/115 (40%), Gaps = 2/115 (1%)

Query: 216 EPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +P +SP+  K+AY    +   +  +      +     ++ ++    L+  +S + +  + 
Sbjct: 435 QPLYSPDGTKIAYRENSNSIKVYDIENDSYHVLLDSSQLYSYVDQDLSYEWSPDSQYLVT 494

Query: 275 SVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
             +     DI  +    +    ++TNT FI     +S D   I + +DR     +
Sbjct: 495 RNRASYNADIVLLKADGSEKPLQITNTGFIEGEPKFSHDGQMIYWSTDRNSLRDI 549


>gi|308069072|ref|YP_003870677.1| peptidase yuxL [Paenibacillus polymyxa E681]
 gi|305858351|gb|ADM70139.1| Probable peptidase yuxL [Paenibacillus polymyxa E681]
          Length = 675

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 87/277 (31%), Gaps = 60/277 (21%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVY---LMDTRIDRAPKRIGNFRSMILAPRFS 266
           R   + +P   P   ++AY           Y   +     + A      +      P +S
Sbjct: 20  RLYWVSDPAIHPISGEIAYVEQHINKERTDYNSGIWLLSSEGASALPFTYGPKDETPVWS 79

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------- 319
            +G +       D    ++ +  +     +LT+      S ++SP+ + I F        
Sbjct: 80  PDGSQLAFLRTTDGKRQVWIIPERGGEARQLTHVENNVRSLAWSPEGTCISFVAKTAENP 139

Query: 320 -------------------------SDREG-----KEQLYVMQSNGSDQKRISQDKEASY 349
                                    SD  G     ++ LYV         + +       
Sbjct: 140 SSPTSDGGTQEAQLKGRVVNRTKAKSDGYGLWDDTRDHLYVTDVTSGHTIQQTS-GAYDV 198

Query: 350 FDPVWSPQGDLIAFTKFSG----------EKFAIGVMKKDGSQ------ERLLVEDSNLQ 393
            +PVWSP G  I F               E+  +  +    S        +L   + +++
Sbjct: 199 AEPVWSPDGRRILFVARIAEHSKEDTDLREQNDLFTIAPATSSSDAVAPLKLTHSELHIE 258

Query: 394 APTWSPSGRSLIFS---RKKDGDTGSKLYSIDLNGRN 427
           +  +SP G ++ F    R   G T ++LY++  +G  
Sbjct: 259 SAAYSPDGSTIAFYGHDRHAKGATQTRLYTVPSSGGT 295



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/337 (13%), Positives = 98/337 (29%), Gaps = 80/337 (23%)

Query: 174 NSRILFVSESVVSGIIKNS--LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           +  I +V + +       +  + ++  +GA+    T         P +SP+  ++A+   
Sbjct: 33  SGEIAYVEQHINKERTDYNSGIWLLSSEGASALPFTYG--PKDETPVWSPDGSQLAFLRT 90

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---------------- 275
            D    R   +        +++ +  + + +  +S  G                      
Sbjct: 91  TDGK--RQVWIIPERGGEARQLTHVENNVRSLAWSPEGTCISFVAKTAENPSSPTSDGGT 148

Query: 276 ---------------------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                                +  D    +Y  D+ S  T + T+  +      +SPD  
Sbjct: 149 QEAQLKGRVVNRTKAKSDGYGLWDDTRDHLYVTDVTSGHTIQQTSGAYDVAEPVWSPDGR 208

Query: 315 QIVFES----------DREGKEQLYVMQSNGSDQKRISQDK----EASYFDPVWSPQGDL 360
           +I+F +          D   +  L+ +    S    ++  K    E       +SP G  
Sbjct: 209 RILFVARIAEHSKEDTDLREQNDLFTIAPATSSSDAVAPLKLTHSELHIESAAYSPDGST 268

Query: 361 IAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA----------------PTWSP 399
           IAF           +  +  +   G     + E  +                   P +S 
Sbjct: 269 IAFYGHDRHAKGATQTRLYTVPSSGGTVVCVTETLDAHIGNAGMSDMRSHLHIGPPRFSA 328

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            G+SL      +G     +Y   L+G  + L      
Sbjct: 329 DGQSLYTLVTLEG--NVHVYQFALDGTFKILTQGDRE 363



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 45/182 (24%)

Query: 306 SASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             +  P S +I +          +    ++++ S G+     +   +     PVWSP G 
Sbjct: 26  DPAIHPISGEIAYVEQHINKERTDYNSGIWLLSSEGASALPFTYGPK--DETPVWSPDGS 83

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR---------K 409
            +AF + +  K  + ++ + G + R L   ++N+++  WSP G  + F            
Sbjct: 84  QLAFLRTTDGKRQVWIIPERGGEARQLTHVENNVRSLAWSPEGTCISFVAKTAENPSSPT 143

Query: 410 KDG--------------------------DTGSKLYSIDLN-GRNETLINTPAYASDPQW 442
            DG                          DT   LY  D+  G      +     ++P W
Sbjct: 144 SDGGTQEAQLKGRVVNRTKAKSDGYGLWDDTRDHLYVTDVTSGHTIQQTSGAYDVAEPVW 203

Query: 443 VG 444
             
Sbjct: 204 SP 205



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/326 (15%), Positives = 102/326 (31%), Gaps = 76/326 (23%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR------ 238
            +   K  + ++   G   R LT   + +     +SP    +++     E+         
Sbjct: 89  RTTDGKRQVWIIPERGGEARQLTHVENNVRSL-AWSPEGTCISFVAKTAENPSSPTSDGG 147

Query: 239 ------------------------------VYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                                         +Y+ D       ++  +    +  P +S +
Sbjct: 148 TQEAQLKGRVVNRTKAKSDGYGLWDDTRDHLYVTDVTSGHTIQQ-TSGAYDVAEPVWSPD 206

Query: 269 GKRALISVQ-----------KDEAMDIYSVDLQSNA----TERLTNTLFINISASYSPDS 313
           G+R L   +           +++          S++      +LT++     SA+YSPD 
Sbjct: 207 GRRILFVARIAEHSKEDTDLREQNDLFTIAPATSSSDAVAPLKLTHSELHIESAAYSPDG 266

Query: 314 SQIVFES-DREGKE----QLYVMQSNGSDQKRISQDKEASYFD--------------PVW 354
           S I F   DR  K     +LY + S+G     +++  +A   +              P +
Sbjct: 267 STIAFYGHDRHAKGATQTRLYTVPSSGGTVVCVTETLDAHIGNAGMSDMRSHLHIGPPRF 326

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           S  G  +           +     DG+ + L   D  +     +   + +I +   D   
Sbjct: 327 SADGQSLYTLVTLEGNVHVYQFALDGTFKILTQGDREIYQFELTLDEQHII-AASTDVAL 385

Query: 415 GSKLYSIDLNGRNETLINTPAYASDP 440
              L+ I ++   E  +      +DP
Sbjct: 386 PGDLFRIAIHSGIEERLT---RVNDP 408



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 33/105 (31%), Gaps = 9/105 (8%)

Query: 347 ASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
               DP   P    IA+ +       +     I ++  +G+           + P WSP 
Sbjct: 22  YWVSDPAIHPISGEIAYVEQHINKERTDYNSGIWLLSSEGASALPFTYGPKDETPVWSPD 81

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
           G  L F R  DG    +++ I   G     L +         W  
Sbjct: 82  GSQLAFLRTTDGKR--QVWIIPERGGEARQLTHVENNVRSLAWSP 124


>gi|298246851|ref|ZP_06970656.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297549510|gb|EFH83376.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 659

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 57/328 (17%), Positives = 109/328 (33%), Gaps = 43/328 (13%)

Query: 153 KIAHTISDDIYQSITGEKGDFN-------SRILFVSESVVSGIIKNSLCVMDRDGANI-R 204
           +  H     +  ++   +   +        R  FV    V    +    V   D A    
Sbjct: 17  RATHPHVPVVLDTLFSIRNVISAVIAPDGKRAAFVVREWVPDQPRQRGRVWCVDTAGGDP 76

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y   +       P +SP+ Q++A+ +    +   +  +        + I    + I    
Sbjct: 77  YPLSTGALDDSTPSWSPDSQQLAFISKSGHEDEALLCIVPAQGGESRTICAMPNGISEVN 136

Query: 265 FSSNGKRALISVQKDE----------------AMDIYSVDLQSNATERLTNTLFINISAS 308
           +S +G R    +  D                  + +++V L     E +T         +
Sbjct: 137 WSPDGSRIAF-LSHDGPKPGNDPIILRPGEERYLRLWTVRLAYGTPESVTPNGVSIWQYA 195

Query: 309 YSPDSSQIV--FESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +SPDSSQ    F +  E  +    Q+ ++ ++G    ++SQ    +     WS  G+ IA
Sbjct: 196 WSPDSSQFAVYFATGPEYSDWYWGQVGIVAASGGAVHQLSQLNRQACSL-AWSLDGNTIA 254

Query: 363 FTKF-----SGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDT 414
           +              I  +     Q R L       +P   +W P GR LI +  +  D 
Sbjct: 255 YVSGNWSDPDRNGGDIYAISLTNGQTRNLT-PELDWSPTWCSWLPDGRHLICAGFE--DL 311

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQW 442
             ++  +D      T +++     D  W
Sbjct: 312 SCQIGLLDSTTGKMTPLSSDFALGDRHW 339


>gi|158337846|ref|YP_001519022.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158308087|gb|ABW29704.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1609

 Score =  100 bits (249), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 98/238 (41%), Gaps = 24/238 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +     ++ +   DG  +R L    +  ++   +SP+ + +A A+ D    ++++  D  
Sbjct: 1355 TASDNGTVKLWSADGKELRTL-KGHNAAVWGVTYSPDGKTIATASDD--GTVKLWSAD-- 1409

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +  + +      + +  +S +GK    +   D  + ++S D      + L     +  
Sbjct: 1410 -GKEVQTLKGHSGSVRSVTYSPDGKTIA-TASFDGTVKLWSAD--GKELQTLKGHSAV-- 1463

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              +YSPD   I   S+    E + +  ++G + + + +   A      +SP G  IA   
Sbjct: 1464 --TYSPDGKTIATASN---YETVKLWSADGKELQTL-KGHSAPVRSVTYSPDGKTIATAS 1517

Query: 366  FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                   + +   DG + + L    + +++ T+SP G+++  +     D   KL+S D
Sbjct: 1518 DDQT---VTLWSTDGKELQTLKGHSAPVRSVTYSPDGKTIATASN---DETVKLWSAD 1569



 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 93/225 (41%), Gaps = 19/225 (8%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G   +         +    +SP+ + +A A+ D    ++++  D    +  + +     +
Sbjct: 1031 GVREQERLLGHSSAVRSVTYSPDGKTIASASDD--KTVKLWSAD---GKELQTLKGHSDL 1085

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + +  +S +GK    +   D  + ++S D      + L     +  S +YSPDS  I   
Sbjct: 1086 VNSVTYSPDGKTIA-TASNDATVKLWSAD--GKELQTLKGHSDLVNSVTYSPDSKTIATA 1142

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            SD      + +  ++G + + + +   A      +SP G  IA     G    + +   D
Sbjct: 1143 SD---DNTVKLWSADGKELQTL-KGHSAPVRSVTYSPDGKTIATASSDGT---VKLWSAD 1195

Query: 380  GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            G + + L    + +++ T+SP G+++  +     D   KL+ +D+
Sbjct: 1196 GKELQTLKGHSAPVRSVTYSPDGKTIATASS---DGTVKLWILDV 1237



 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 88/239 (36%), Gaps = 24/239 (10%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ +     ++ +   DG  ++ L       +    +SP+ + +A A++D         
Sbjct: 1392 KTIATASDDGTVKLWSADGKEVQTL-KGHSGSVRSVTYSPDGKTIATASFDG-------- 1442

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                     K +   +    A  +S +GK    +    E + ++S D      + L    
Sbjct: 1443 TVKLWSADGKELQTLKGH-SAVTYSPDGKTIA-TASNYETVKLWSAD--GKELQTLKGHS 1498

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S +YSPD   I   SD    +Q   + S    + +  +   A      +SP G  I
Sbjct: 1499 APVRSVTYSPDGKTIATASD----DQTVTLWSTDGKELQTLKGHSAPVRSVTYSPDGKTI 1554

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            A          + +   DG + + L   SN + + T+SP G ++  +     D   KL+
Sbjct: 1555 ATASNDET---VKLWSADGKELQTLKGHSNRVLSVTYSPDGNTIATASS---DRTVKLW 1607



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 92/229 (40%), Gaps = 26/229 (11%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +SP+ + +A A+  D   ++++  D    +  + +    + +    +S +GK    +  
Sbjct: 1345 TYSPDGKIIATAS--DNGTVKLWSAD---GKELRTLKGHNAAVWGVTYSPDGKTIA-TAS 1398

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D  + ++S D      + L        S +YSPD   I   S  +G  +L+   ++G +
Sbjct: 1399 DDGTVKLWSAD--GKEVQTLKGHSGSVRSVTYSPDGKTIATASF-DGTVKLW--SADGKE 1453

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPT 396
             + +       +    +SP G  IA          + +   DG + + L    + +++ T
Sbjct: 1454 LQTLK-----GHSAVTYSPDGKTIATASNYET---VKLWSADGKELQTLKGHSAPVRSVT 1505

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
            +SP G+++  +     D    L+S D  G+  +TL    A      +  
Sbjct: 1506 YSPDGKTIATASD---DQTVTLWSTD--GKELQTLKGHSAPVRSVTYSP 1549



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 91/253 (35%), Gaps = 22/253 (8%)

Query: 133  VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII--- 189
            VK  +++  +            A  + D IY     E+   +S  +        G     
Sbjct: 1002 VKTGQRLQSEDLDGVVTMQALAA--MRDVIYGVREQERLLGHSSAVRSVTYSPDGKTIAS 1059

Query: 190  ---KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 ++ +   DG  ++ L    D +     +SP+ + +A A+ D      V L     
Sbjct: 1060 ASDDKTVKLWSADGKELQTLKGHSDLVNSV-TYSPDGKTIATASNDA----TVKLWSAD- 1113

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             +  + +     ++ +  +S + K    +   D  + ++S D      + L        S
Sbjct: 1114 GKELQTLKGHSDLVNSVTYSPDSKTIA-TASDDNTVKLWSAD--GKELQTLKGHSAPVRS 1170

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +YSPD   I   +  +G  +L+   ++G + + + +   A      +SP G  IA T  
Sbjct: 1171 VTYSPDGKTIA-TASSDGTVKLW--SADGKELQTL-KGHSAPVRSVTYSPDGKTIA-TAS 1225

Query: 367  SGEKFAIGVMKKD 379
            S     + ++  +
Sbjct: 1226 SDGTVKLWILDVE 1238



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 79/199 (39%), Gaps = 17/199 (8%)

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            R  +R+    S + +  +S +GK    S   D+ + ++S D      + L     +  S 
Sbjct: 1033 REQERLLGHSSAVRSVTYSPDGKTIA-SASDDKTVKLWSAD--GKELQTLKGHSDLVNSV 1089

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +YSPD   I   S+      + +  ++G + + + +          +SP    IA     
Sbjct: 1090 TYSPDGKTIATASN---DATVKLWSADGKELQTL-KGHSDLVNSVTYSPDSKTIATASDD 1145

Query: 368  GEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 + +   DG + + L    + +++ T+SP G+++  +     D   KL+S   +G+
Sbjct: 1146 NT---VKLWSADGKELQTLKGHSAPVRSVTYSPDGKTIATASS---DGTVKLWS--ADGK 1197

Query: 427  N-ETLINTPAYASDPQWVG 444
              +TL    A      +  
Sbjct: 1198 ELQTLKGHSAPVRSVTYSP 1216



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 66/153 (43%), Gaps = 16/153 (10%)

Query: 275  SVQKDEAMDIYSVDLQSNATE----RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            S+  D       +D +S        +LT    + +S +YSPD   I   SD      + +
Sbjct: 1309 SLDYDPYTKAKLLDQESFQIRDGISQLT-VEALVLSVTYSPDGKIIATASD---NGTVKL 1364

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-ED 389
              ++G + + + +   A+ +   +SP G  IA     G    + +   DG + + L    
Sbjct: 1365 WSADGKELRTL-KGHNAAVWGVTYSPDGKTIATASDDGT---VKLWSADGKEVQTLKGHS 1420

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             ++++ T+SP G+++  +     D   KL+S D
Sbjct: 1421 GSVRSVTYSPDGKTIATAS---FDGTVKLWSAD 1450


>gi|268318113|ref|YP_003291832.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Rhodothermus marinus DSM 4252]
 gi|262335647|gb|ACY49444.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Rhodothermus marinus DSM 4252]
          Length = 766

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 101/302 (33%), Gaps = 53/302 (17%)

Query: 198 RDGANIRYLTPS-RDQILFEPRFSPNQQKVAYAT-----------YDDEDILRVYLMDTR 245
           +DG     +T   R + L  P  SP+ + +AY                     +YL+ T 
Sbjct: 25  QDGNEPITVTDLLRIRQLESPTVSPDGRWLAYIVRQIDTVETEPDVRYAYRTHLYLVPTD 84

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
               P+   +       P +     R            ++ + L     E+LT+      
Sbjct: 85  GSTPPRAYTHGDRTASQPAWHPESDRIAFVRPVGGKPQLFVISLFGGEAEQLTDFRHGAS 144

Query: 306 SASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS------- 355
              +SPD S ++F    S+++ +              R + D   +  +P  S       
Sbjct: 145 RPRWSPDGSLLLFTATLSEKDVRRAEGTPPWPDERPARTATDTAGARPNPDGSLAEIRAW 204

Query: 356 -----PQGDLIAFTK--FSGEKF--------AIGVMKK-DGSQERLLVED-SNLQAPTWS 398
                  G+   F +  F GE+          + V++   G++ R L     +     W 
Sbjct: 205 LARNEADGNPRVFHRLDFQGEQSLQPQLRFQHLYVVEPRPGAKPRALTHGFFSFSGAEWL 264

Query: 399 PSGRSLIF------SRKKDGDTGSKLYSIDLNGRNETLIN--------TPAYASDPQWVG 444
           P GR ++       +R  D   GS LY ID++     L+          P  + D QW+ 
Sbjct: 265 PHGRQIVAAALLDSTRHPDRTRGSDLYLIDVDTSRINLLLHIDGYALFAPTPSPDGQWIA 324

Query: 445 FM 446
           F+
Sbjct: 325 FL 326



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 54/310 (17%), Positives = 103/310 (33%), Gaps = 50/310 (16%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V    +  L ++  DG+         D+   +P + P   ++A+             + +
Sbjct: 70  VRYAYRTHLYLVPTDGSTPPRAYTHGDRTASQPAWHPESDRIAFVRPVGGKPQ--LFVIS 127

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALIS---VQKDEAMDIYSVDL-QSNATERLTNT 300
                 +++ +FR     PR+S +G   L +    +KD      +            T+T
Sbjct: 128 LFGGEAEQLTDFRHGASRPRWSPDGSLLLFTATLSEKDVRRAEGTPPWPDERPARTATDT 187

Query: 301 LFINISASYS------------PDSSQIVFES-DREGK---------EQLYVMQSNGSDQ 338
                +   S             D +  VF   D +G+         + LYV++     +
Sbjct: 188 AGARPNPDGSLAEIRAWLARNEADGNPRVFHRLDFQGEQSLQPQLRFQHLYVVEPRPGAK 247

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLL--VE 388
            R       S+    W P G  I                   + ++  D S+  LL  ++
Sbjct: 248 PRALTHGFFSFSGAEWLPHGRQIVAAALLDSTRHPDRTRGSDLYLIDVDTSRINLLLHID 307

Query: 389 DSNLQAPTWSPSGRSLIFSR---KKDGDTGSKLYSIDLNGRNETLINT---------PAY 436
              L APT SP G+ + F        G   +++    L+GR    + T           +
Sbjct: 308 GYALFAPTPSPDGQWIAFLAAPLADSGYAQTEIGLFRLDGRRPPELLTLHFDRSAGNLKW 367

Query: 437 ASDPQWVGFM 446
           A D +++ F+
Sbjct: 368 APDMRYLYFV 377



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 64/292 (21%), Positives = 94/292 (32%), Gaps = 54/292 (18%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA-TYD 232
           + RI FV         K  L V+   G     LT  R      PR+SP+   + +  T  
Sbjct: 108 SDRIAFVRPVGG----KPQLFVISLFGGEAEQLTDFRHG-ASRPRWSPDGSLLLFTATLS 162

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-----QKDEAM----- 282
           ++D+ R        D  P R           R + +G  A I       + D        
Sbjct: 163 EKDVRRAEGTPPWPDERPARTAT---DTAGARPNPDGSLAEIRAWLARNEADGNPRVFHR 219

Query: 283 ----------------DIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFES----- 320
                            +Y V          LT+  F    A + P   QIV  +     
Sbjct: 220 LDFQGEQSLQPQLRFQHLYVVEPRPGAKPRALTHGFFSFSGAEWLPHGRQIVAAALLDST 279

Query: 321 ---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-----TKFSGEKFA 372
              DR     LY++  + S    +      + F P  SP G  IAF           +  
Sbjct: 280 RHPDRTRGSDLYLIDVDTSRINLLLHIDGYALFAPTPSPDGQWIAFLAAPLADSGYAQTE 339

Query: 373 IGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSI 421
           IG+ + DG +   L+     ++     W+P  R L F    +G  G  LY I
Sbjct: 340 IGLFRLDGRRPPELLTLHFDRSAGNLKWAPDMRYLYFVAPSNG--GFPLYRI 389



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 69/240 (28%), Gaps = 25/240 (10%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI-- 139
            + D+   +     S+   + W +             E     RV  RL D +  + +  
Sbjct: 183 TATDTAGARPNPDGSLAEIRAWLARN-----------EADGNPRVFHRL-DFQGEQSLQP 230

Query: 140 ---IGKKFFSSP---ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
                  +   P   A  R + H                  +  L  S         + L
Sbjct: 231 QLRFQHLYVVEPRPGAKPRALTHGFFSFSGAEWLPHGRQIVAAALLDSTRHPDRTRGSDL 290

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR----VYLMDTRIDRA 249
            ++D D + I  L       LF P  SP+ Q +A+      D       + L      R 
Sbjct: 291 YLIDVDTSRINLLLHIDGYALFAPTPSPDGQWIAFLAAPLADSGYAQTEIGLFRLDGRRP 350

Query: 250 PKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           P+ +  +F       +++ + +        +    +Y +        R       + +AS
Sbjct: 351 PELLTLHFDRSAGNLKWAPDMRYLYFVAPSNGGFPLYRIPFFDLHPPRPAEATAPDTTAS 410



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 65/219 (29%), Gaps = 23/219 (10%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD--- 199
           +  +  A  R        +I   +   + D N R+    +      ++  L         
Sbjct: 182 RTATDTAGARPNPDGSLAEIRAWLARNEADGNPRVFHRLDFQGEQSLQPQLRFQHLYVVE 241

Query: 200 ---GANIRYLTPSRDQILFEPRFSPNQQKVAYATY-------DDEDILRVYLMDTRIDRA 249
              GA  R LT           + P+ +++  A         D      +YL+D    R 
Sbjct: 242 PRPGAKPRALTHGFFSFSGA-EWLPHGRQIVAAALLDSTRHPDRTRGSDLYLIDVDTSRI 300

Query: 250 PKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +      + AP  S +G+         +       +I    L       L  TL  +
Sbjct: 301 NLLLHIDGYALFAPTPSPDGQWIAFLAAPLADSGYAQTEIGLFRLDGRRPPELL-TLHFD 359

Query: 305 ISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            SA    ++PD   + F +   G   LY +        R
Sbjct: 360 RSAGNLKWAPDMRYLYFVAPSNGGFPLYRIPFFDLHPPR 398


>gi|111224928|ref|YP_715722.1| WD-40 repeat-containing protein [Frankia alni ACN14a]
 gi|111152460|emb|CAJ64196.1| Hypothetical protein; putative WD40-repeat domains [Frankia alni
            ACN14a]
          Length = 1578

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 84/266 (31%), Gaps = 21/266 (7%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             +++     +  + D    + +         +    +SP+  ++   + D        + 
Sbjct: 988  RILTTSTDGTARIWDSTTGHHQLTLTGHTDWVTGGAWSPDNTRILTTSDDR----TARIW 1043

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTL 301
            DT        +    S++    +S +  R L +   D    I+  D  +   +  LT   
Sbjct: 1044 DTTTGHHQLTLTGHTSLLTGGAWSPDNTRIL-TTSDDRTARIW--DTTTGHHQLTLTGHT 1100

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +    ++SPD+++I+  SD        +  +     +       +      WSP    I
Sbjct: 1101 SLLTGGAWSPDNTRILTTSD---DRTARIWDTTTGHHQLTLTGHTSLLTGGAWSPDNTRI 1157

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLY 419
              T   G      +        +L +           WSP    ++ +     D  ++++
Sbjct: 1158 LTTSTDGTA---RIWDSTTGHHQLTLTGHTDWVTGGAWSPDNTRILTTST---DGTARIW 1211

Query: 420  SIDLNGRNE-TLINTPAYASDPQWVG 444
                 G ++ TL     + +   W  
Sbjct: 1212 D-STTGHHQLTLTGHTDWVTGGAWSP 1236



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 82/265 (30%), Gaps = 19/265 (7%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             +++     +  + D    + +        +L    +SP+  ++   + D        + 
Sbjct: 1072 RILTTSDDRTARIWDTTTGHHQLTLTGHTSLLTGGAWSPDNTRILTTSDDR----TARIW 1127

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTL 301
            DT        +    S++    +S +  R L +   D    I+  D  +   +  LT   
Sbjct: 1128 DTTTGHHQLTLTGHTSLLTGGAWSPDNTRIL-TTSTDGTARIW--DSTTGHHQLTLTGHT 1184

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  ++SPD+++I+  S  +G  +++   S     +              WSP    I
Sbjct: 1185 DWVTGGAWSPDNTRILTTST-DGTARIW--DSTTGHHQLTLTGHTDWVTGGAWSPDNTRI 1241

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
              T   G               +L +           WSP    ++ +     D  ++++
Sbjct: 1242 LTTSTDGTA---RTWDSTTGHHQLTLTGHTDALTGGAWSPDNTRILTTSD---DGTARIW 1295

Query: 420  SIDLNGRNETLINTPAYASDPQWVG 444
                     TL      A+   W  
Sbjct: 1296 DTTTGHHQHTLPGHTDTATGGAWSP 1320



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 66/221 (29%), Gaps = 16/221 (7%)

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             + D    + ++  P          +SP+  ++   + D        + D         +
Sbjct: 1293 RIWDTTTGHHQHTLPGHTDTATGGAWSPDNTRILTTSTDG----TARIWDATTGHHQHTL 1348

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPD 312
                       +S +  R L +   D    I+  D  +   +  LT         ++SPD
Sbjct: 1349 TGHTDTATGGAWSPDNTRIL-TTSTDGTARIW--DATTGHHQLTLTGHTDTATGGAWSPD 1405

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +++I+  S  +G  +++   +     +        +     WSP    I  T   G    
Sbjct: 1406 NTRILTTST-DGTARIW--DATTGHHQHTLTGHTDTATGGAWSPDNTRILTTSRDGTA-- 1460

Query: 373  IGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                          L    + +    WSP    ++ + +  
Sbjct: 1461 -RTWDATTGHHLHTLTGHSNWVTGGAWSPDNTRILTTSRDH 1500



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 73/230 (31%), Gaps = 15/230 (6%)

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
            T   G ++     +  +   G  +    + D    + +              +SP+  ++
Sbjct: 1354 TATGGAWSPDNTRILTTSTDGTAR----IWDATTGHHQLTLTGHTDTATGGAWSPDNTRI 1409

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
               + D        + D         +           +S +  R L +  +D     + 
Sbjct: 1410 LTTSTDG----TARIWDATTGHHQHTLTGHTDTATGGAWSPDNTRIL-TTSRDGTARTW- 1463

Query: 287  VDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             D  +      LT         ++SPD+++I+  S R+   +++   +  +   R+ Q  
Sbjct: 1464 -DATTGHHLHTLTGHSNWVTGGAWSPDNTRILTTS-RDHTVRIWDATTGRAVGWRLEQLP 1521

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            +      +WS  GD +        ++   ++ +     RL  E      P
Sbjct: 1522 DGELA--LWSADGDELRGASEGSWRWLGWLVPRGDQLVRLPAETWGPLPP 1569



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 42/149 (28%), Gaps = 11/149 (7%)

Query: 298  TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            T         ++SPD+++I+  S   G     +  +     +              WSP 
Sbjct: 929  TGHSAALTGGAWSPDNTRILTTS---GDGTARIWDATTGHHQLTLTGHSDWVTGGAWSPD 985

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTG 415
               I  T   G      +        +L +           WSP    ++ +     D  
Sbjct: 986  NTRILTTSTDGTA---RIWDSTTGHHQLTLTGHTDWVTGGAWSPDNTRILTTSD---DRT 1039

Query: 416  SKLYSIDLNGRNETLINTPAYASDPQWVG 444
            ++++         TL    +  +   W  
Sbjct: 1040 ARIWDTTTGHHQLTLTGHTSLLTGGAWSP 1068


>gi|256394899|ref|YP_003116463.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Catenulispora acidiphila DSM 44928]
 gi|256361125|gb|ACU74622.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Catenulispora acidiphila DSM 44928]
          Length = 635

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 90/257 (35%), Gaps = 29/257 (11%)

Query: 193 LCVMDRDGANIRYLTPSRDQI-----LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
           L + + DG+    L PS + +     +FEP  SP+  +VA+         R   +     
Sbjct: 50  LVITNPDGSGTHLLHPSGNGLSATSQIFEPAVSPDGSRVAFGDV----ASRAVWVAGVDG 105

Query: 248 RAPKRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFI 303
             P RI +     +   P +S +G     + ++     I       +         T   
Sbjct: 106 SRPVRISSPTGSAVDSEPTWSPDGTSVFFT-RRAGTAQIMKASADGDHDEAAVFFPTGTN 164

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +   S + +   + FE +  G   ++V+ +             A+   P WSP G  +A+
Sbjct: 165 DTEPSVAVNGD-LAFERNVNGTSTIFVLAAGAGSAT-----PFANGARPAWSPDGSRLAY 218

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   A+ V  + G +  +         P W+  G  + F     G    +++ +D 
Sbjct: 219 ----DRGSALLVKTRAGQESLIGTSGVQASRPAWAADGAHIAFEGSVPGHH-RQIWVVDT 273

Query: 424 NGRNETLINTPAYASDP 440
           +    TL  +P  A  P
Sbjct: 274 S----TLTVSPVGAEPP 286



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 70/193 (36%), Gaps = 16/193 (8%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPD 312
           +  S I  P  S +G R         A  ++   +  +   R++      ++   ++SPD
Sbjct: 71  SATSQIFEPAVSPDGSRVAFGDVASRA--VWVAGVDGSRPVRISSPTGSAVDSEPTWSPD 128

Query: 313 SSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            +  VF + R G  Q+    ++G  D+  +      +  +P  +  GD +AF +      
Sbjct: 129 GTS-VFFTRRAGTAQIMKASADGDHDEAAVFFPTGTNDTEPSVAVNGD-LAFERNVNGTS 186

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            I V+             +    P WSP G  L +      D GS L      G+   + 
Sbjct: 187 TIFVLAAGAGSATPFANGAR---PAWSPDGSRLAY------DRGSALLVKTRAGQESLIG 237

Query: 432 NTPAYASDPQWVG 444
            +   AS P W  
Sbjct: 238 TSGVQASRPAWAA 250



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 68/219 (31%), Gaps = 24/219 (10%)

Query: 186 SGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             +   ++ V   DG+   R  +P+   +  EP +SP+   V +         ++     
Sbjct: 91  GDVASRAVWVAGVDGSRPVRISSPTGSAVDSEPTWSPDGTSVFFT--RRAGTAQIMKASA 148

Query: 245 RIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
             D     +          P  + NG         +    I+ +   + +     N    
Sbjct: 149 DGDHDEAAVFFPTGTNDTEPSVAVNGD-LAFERNVNGTSTIFVLAAGAGSATPFANG--- 204

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               ++SPD S++ +  DR G   L   ++    Q+ +          P W+  G  IAF
Sbjct: 205 -ARPAWSPDGSRLAY--DR-GSALLVKTRA---GQESLIGTSGVQASRPAWAADGAHIAF 257

Query: 364 -TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                G    I V+         L        P   P G
Sbjct: 258 EGSVPGHHRQIWVVDTST-----LTVSPVGAEP---PDG 288


>gi|281410785|gb|ADA68806.1| HET-E [Podospora anserina]
          Length = 455

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 89/264 (33%), Gaps = 22/264 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 144 QRVASGSGDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQRVASGSGDK----TIKI 199

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 200 WDTASGTCTQTLEGHGGSVWSVAFSPDGQRVA-SGSDDKTIKIW--DTASGTCTQTLEGH 256

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S  +SPD  ++   SD      + +  +      +  +    S +   +SP G  
Sbjct: 257 GGWVQSVVFSPDGQRVASGSD---DHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQR 313

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +A     G    I +               ++ +  +SP G+ +  S   DG    K++ 
Sbjct: 314 VASGSIDGT---IKIWDAASG-----TCTQSVWSVAFSPDGQRVA-SGSIDGT--IKIWD 362

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
                  +TL     +     +  
Sbjct: 363 AASGTCTQTLEGHGGWVHSVAFSP 386



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 89/266 (33%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 18  QRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVASGSDDK----TIRI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 74  WDAASGTCTQTLEGHGGRVQSVAFSPDGQRVA-SGSDDHTIKIW--DAASGTCTQTLEGH 130

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  
Sbjct: 131 GSSVLSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A          I +           +E    ++ +  +SP G+ +        D   K+
Sbjct: 188 VA---SGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSD---DKTIKI 241

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 242 WDTASGTCTQTLEGHGGWVQSVVFSP 267



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 78/241 (32%), Gaps = 19/241 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ Q+VA  + D      + + DT      + +      + +  FS
Sbjct: 1   LEGHGSSVLSVAFSPDGQRVASGSDDK----TIKIWDTASGTGTQTLEGHGGSVWSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
            +G+R   S   D+ + I+  D  S    + L        S ++SPD  ++   SD    
Sbjct: 57  PDGQRVA-SGSDDKTIRIW--DAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSD---D 110

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +  +      +  +   +S     +SP G  +A          I +          
Sbjct: 111 HTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA---SGSGDKTIKIWDTASGTCTQ 167

Query: 386 LVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +E       +  +SP G+ +       GD   K++        +TL           + 
Sbjct: 168 TLEGHGNSVWSVAFSPDGQRVA---SGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFS 224

Query: 444 G 444
            
Sbjct: 225 P 225



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 74/226 (32%), Gaps = 21/226 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 228 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDH----TIKI 283

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D       + +      + +  FS +G+R   S   D  + I+  D  S    +     
Sbjct: 284 WDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSIDGTIKIW--DAASGTCTQ----- 335

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++SPD  ++   S       + +  +      +  +          +SP G  +
Sbjct: 336 -SVWSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRV 391

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
           A     G    I +           +E     +Q+  +SP G+ + 
Sbjct: 392 ASGSIDGT---IKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVA 434



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 7/115 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG I  ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 347 QRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDG----TIKI 402

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            D       + +      + +  FS +G+R   S   D+ + I+  D  S    +
Sbjct: 403 WDAASGTCTQTLEGHGGWVQSVAFSPDGQRVA-SGSSDKTIKIW--DTASGTCTQ 454


>gi|156048338|ref|XP_001590136.1| hypothetical protein SS1G_08900 [Sclerotinia sclerotiorum 1980]
 gi|154693297|gb|EDN93035.1| hypothetical protein SS1G_08900 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1096

 Score =  100 bits (248), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 93/292 (31%), Gaps = 39/292 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
             K          RLWD    + +   +            H  S+ +        G     
Sbjct: 747  TKVASSSYDQTIRLWDTTTGESLQTLE-----------GH--SNSVTSVAFSPDG----- 788

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                   V SG    ++ + D                +    FSP+  KVA  ++D    
Sbjct: 789  -----TKVASGSHDKTIRLWDTITGESLQTLEGHSNWVSSVAFSPDGTKVASGSHDK--- 840

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TE 295
              + L DT    + + +    + + +  FS +G +   S   D+ + ++  D  +    +
Sbjct: 841  -TIRLWDTTTGESLQTLEGHSNWVSSVAFSPDGTKVA-SGSIDQTIRLW--DTTTGESLQ 896

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             L        S ++SPD +++   S     + + +  +   +  +  +          +S
Sbjct: 897  TLEGHSNWVSSVAFSPDGTKVASGSI---DQTIRLWDTTTGESLQTLEGHSNWVSSVAFS 953

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
            P G  +A   +      I +      +    +E    ++ +  +SP G  + 
Sbjct: 954  PDGTKVASGSYDQT---IRLWDTITGESLQTLEGHSRSVGSVAFSPDGTKVA 1002



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 83/242 (34%), Gaps = 17/242 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    ++   FSP+  KVA ++YD      + L DT    + + +    + + +  
Sbjct: 728 QTLEGHSNSVYSVAFSPDGTKVASSSYDQ----TIRLWDTTTGESLQTLEGHSNSVTSVA 783

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G +   S   D+ + ++   +   + + L        S ++SPD +++   S    
Sbjct: 784 FSPDGTKVA-SGSHDKTIRLWDT-ITGESLQTLEGHSNWVSSVAFSPDGTKVASGSH--- 838

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +  +   +  +  +          +SP G  +A          I +      +  
Sbjct: 839 DKTIRLWDTTTGESLQTLEGHSNWVSSVAFSPDGTKVASGSIDQT---IRLWDTTTGESL 895

Query: 385 LLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             +E  +    +  +SP G  +        D   +L+        +TL     + S   +
Sbjct: 896 QTLEGHSNWVSSVAFSPDGTKVASGSI---DQTIRLWDTTTGESLQTLEGHSNWVSSVAF 952

Query: 443 VG 444
             
Sbjct: 953 SP 954



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 75/231 (32%), Gaps = 17/231 (7%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           F+P    +   +       I ++    +    A + +    + + +  FS +G +   S 
Sbjct: 694 FAPENSIIRKTFQKCIPSWIYKISRTRSNWSAALQTLEGHSNSVYSVAFSPDGTKVA-SS 752

Query: 277 QKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             D+ + ++  D  +    + L        S ++SPD +++   S     + + +  +  
Sbjct: 753 SYDQTIRLW--DTTTGESLQTLEGHSNSVTSVAFSPDGTKVASGSH---DKTIRLWDTIT 807

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-- 393
            +  +  +          +SP G  +A          I +      +    +E  +    
Sbjct: 808 GESLQTLEGHSNWVSSVAFSPDGTKVASGSHDKT---IRLWDTTTGESLQTLEGHSNWVS 864

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +  +SP G  +        D   +L+        +TL     + S   +  
Sbjct: 865 SVAFSPDGTKVASGSI---DQTIRLWDTTTGESLQTLEGHSNWVSSVAFSP 912



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 86/268 (32%), Gaps = 55/268 (20%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
             K     +    RLWD    + +   +            H  S+ +        G     
Sbjct: 873  TKVASGSIDQTIRLWDTTTGESLQTLE-----------GH--SNWVSSVAFSPDG----- 914

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                   V SG I  ++ + D                +    FSP+  KVA  +YD    
Sbjct: 915  -----TKVASGSIDQTIRLWDTTTGESLQTLEGHSNWVSSVAFSPDGTKVASGSYDQ--- 966

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              + L DT    + + +      + +  FS +G +   S  +DE + ++   +   + + 
Sbjct: 967  -TIRLWDTITGESLQTLEGHSRSVGSVAFSPDGTKVA-SGSRDETIRLWDT-ITGESLQS 1023

Query: 297  LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            L N   +  S+++     +  F S+       ++ + +  + + I       +  P + P
Sbjct: 1024 LKNHSGLEASSAF-----ERYFISNH------WIAERSDEEVRNI------FWLPPDYRP 1066

Query: 357  QGDL-----IAFTKFSGE----KFAIGV 375
                     I     +G     KF I +
Sbjct: 1067 TSTYFCNGVIVMAFSTGGIFLLKFDIYL 1094


>gi|170093515|ref|XP_001877979.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647838|gb|EDR12082.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1462

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 57/312 (18%), Positives = 111/312 (35%), Gaps = 36/312 (11%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      R  V        R+WD +  ++++G        SW +          QS+  
Sbjct: 988  TVAFSPDGRHIVSGSWDKTVRVWDAQTGQRVMGPLRRIVSGSWDETVRVWDAQTGQSVMD 1047

Query: 169  EKGDFNSRILFVSES-----VVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPN 222
                 +  +  V+ S     +VSG    ++ V D + G ++       D I+    FSP+
Sbjct: 1048 PFKGHDDYVASVAFSPDGRHIVSGSWDKTIRVWDAQTGQSVMDPFKGHDDIVTSVAFSPD 1107

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKD 279
             + +   + D    +RV+   T      + +G F+     + +  FS +G+  + S   D
Sbjct: 1108 GRHIVSGSCD--KTVRVWDAQTGQ----RVMGPFKGHDDTVTSVAFSPDGRHIV-SGSWD 1160

Query: 280  EAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            E + ++  D Q+  +    L        S ++SP+   IV  S     E + V  +    
Sbjct: 1161 ETVRVW--DAQTGQSVMDPLKGHNGRVTSVAFSPNGRHIVSGS---WDETVRVWDAQTGQ 1215

Query: 338  QKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL---LVEDSNLQ 393
                  +          +SP G  I    +      + V      Q  +      +  + 
Sbjct: 1216 SVMDPLKGHNGRVTSVAFSPNGRHIVSGSWDKS---VRVWDAQTGQSVIDPLKGHNGRVT 1272

Query: 394  APTWSPSGRSLI 405
            +  +SP+GR ++
Sbjct: 1273 SVAFSPNGRHIV 1284



 Score = 91.6 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 55/307 (17%), Positives = 103/307 (33%), Gaps = 39/307 (12%)

Query: 113  TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
               V      R  V        R+WD         +    SP   R I     D   +  
Sbjct: 960  VASVAFSPDGRHIVSGSWDKTIRVWD--------AQTVAFSPDG-RHIVSGSWDKTVRVW 1010

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQK 225
              + G    R++     +VSG    ++ V D + G ++       D  +    FSP+ + 
Sbjct: 1011 DAQTG---QRVMGPLRRIVSGSWDETVRVWDAQTGQSVMDPFKGHDDYVASVAFSPDGRH 1067

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +   ++D    +RV+   T         G    ++ +  FS +G+  + S   D+ + ++
Sbjct: 1068 IVSGSWD--KTIRVWDAQTGQSVMDPFKG-HDDIVTSVAFSPDGRHIV-SGSCDKTVRVW 1123

Query: 286  SVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-I 341
              D Q+     +      +    S ++SPD   IV  S     E + V  +         
Sbjct: 1124 --DAQTGQ-RVMGPFKGHDDTVTSVAFSPDGRHIVSGS---WDETVRVWDAQTGQSVMDP 1177

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWS 398
             +          +SP G  I    +      + V      Q     L   +  + +  +S
Sbjct: 1178 LKGHNGRVTSVAFSPNGRHIVSGSWDET---VRVWDAQTGQSVMDPLKGHNGRVTSVAFS 1234

Query: 399  PSGRSLI 405
            P+GR ++
Sbjct: 1235 PNGRHIV 1241



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 65/202 (32%), Gaps = 29/202 (14%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  +    FSP+ + +   ++D    +RV+   T        +      + +  FS
Sbjct: 824 LAGHNDKVASVAFSPDGRHIVSGSWD--KTIRVWDAQTG-QSVIDPLKGHDDRVTSVAFS 880

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREG 324
            +G+  + S   D+ + ++  D Q+  +    L        S  +SPD   IV  SD   
Sbjct: 881 PDGRHIV-SGSNDKTVRVW--DAQTGQSVMDPLKGHDAYVTSVRFSPDGRHIVSGSD--- 934

Query: 325 KEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              + V  +          +    +     +SP G  I    +      I V        
Sbjct: 935 DSTIRVWDAQTGQSVMDPFKGHNDTVASVAFSPDGRHIVSGSWDKT---IRVWDAQT--- 988

Query: 384 RLLVEDSNLQAPTWSPSGRSLI 405
                        +SP GR ++
Sbjct: 989 -----------VAFSPDGRHIV 999



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 89/285 (31%), Gaps = 42/285 (14%)

Query: 109  QVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
              + +     +G            R+WD +  + ++               H   DDI  
Sbjct: 1054 DYVASVAFSPDGRHIVSGSWDKTIRVWDAQTGQSVMD----------PFKGH---DDIVT 1100

Query: 165  SITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQ 223
            S+                 +VSG    ++ V D + G  +       D  +    FSP+ 
Sbjct: 1101 SVAFSPDG---------RHIVSGSCDKTVRVWDAQTGQRVMGPFKGHDDTVTSVAFSPDG 1151

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            + +   ++D+   +RV+   T         G     + +  FS NG+  + S   DE + 
Sbjct: 1152 RHIVSGSWDE--TVRVWDAQTGQSVMDPLKG-HNGRVTSVAFSPNGRHIV-SGSWDETVR 1207

Query: 284  IYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-R 340
            ++  D Q+  +    L        S ++SP+   IV  S     + + V  +        
Sbjct: 1208 VW--DAQTGQSVMDPLKGHNGRVTSVAFSPNGRHIVSGS---WDKSVRVWDAQTGQSVID 1262

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
              +          +SP G  I    +        V      Q  +
Sbjct: 1263 PLKGHNGRVTSVAFSPNGRHIVSGSWDKTA---RVWDAQTGQSVI 1304



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 94/313 (30%), Gaps = 51/313 (16%)

Query: 113  TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
               V      R  V        R+WD +  + +I               H   D +    
Sbjct: 831  VASVAFSPDGRHIVSGSWDKTIRVWDAQTGQSVID----------PLKGH--DDRVTSVA 878

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQK 225
                G            +VSG    ++ V D + G ++       D  +   RFSP+ + 
Sbjct: 879  FSPDG----------RHIVSGSNDKTVRVWDAQTGQSVMDPLKGHDAYVTSVRFSPDGRH 928

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +   + D    +RV+   T         G     + +  FS +G+  + S   D+ + ++
Sbjct: 929  IVSGSDD--STIRVWDAQTGQSVMDPFKG-HNDTVASVAFSPDGRHIV-SGSWDKTIRVW 984

Query: 286  SVDLQSNAT----ERLTNTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGS 336
              D Q+ A       + +  +      +   + Q V    R        E + V  +   
Sbjct: 985  --DAQTVAFSPDGRHIVSGSWDKTVRVWDAQTGQRVMGPLRRIVSGSWDETVRVWDAQTG 1042

Query: 337  DQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-- 393
                        Y     +SP G  I    +      I V      Q  +     +    
Sbjct: 1043 QSVMDPFKGHDDYVASVAFSPDGRHIVSGSWDKT---IRVWDAQTGQSVMDPFKGHDDIV 1099

Query: 394  -APTWSPSGRSLI 405
             +  +SP GR ++
Sbjct: 1100 TSVAFSPDGRHIV 1112



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 61/170 (35%), Gaps = 15/170 (8%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTN 299
           MD   ++   R+      + +  FS +G+  + S   D+ + ++  D Q+  +    L  
Sbjct: 813 MDHWSEKCVLRLAGHNDKVASVAFSPDGRHIV-SGSWDKTIRVW--DAQTGQSVIDPLKG 869

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQG 358
                 S ++SPD   IV  S+    + + V  +          +  +A      +SP G
Sbjct: 870 HDDRVTSVAFSPDGRHIVSGSN---DKTVRVWDAQTGQSVMDPLKGHDAYVTSVRFSPDG 926

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPT--WSPSGRSLI 405
             I           I V      Q  +   +  N    +  +SP GR ++
Sbjct: 927 RHIVSGSDDST---IRVWDAQTGQSVMDPFKGHNDTVASVAFSPDGRHIV 973


>gi|289580244|ref|YP_003478710.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
 gi|289529797|gb|ADD04148.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
          Length = 668

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 81/213 (38%), Gaps = 13/213 (6%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT- 300
           +DT      + + +  ++   P  S +G        +    +++ +D+++   E+ ++  
Sbjct: 7   LDTETADVLESLASLPTIA-HPTISPDGSEIAFYYDETGRNELHVLDVETGTLEQWSDGD 65

Query: 301 --LFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                     +  D  ++ F  D  G EQ  +Y +   G+ +  +  D +A   D   S 
Sbjct: 66  VPRNARWFLRWDADGDRVFFHQDEGGDEQNDIYALSRAGAVESVVEIDGQAVLND--VSD 123

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDT- 414
            G+ + FT     +           +   L + +  + A ++SP G  + ++  +  D  
Sbjct: 124 DGESLLFTSNRDGQMNAYRYDCTSEEVTKLTDYERAVGALSFSPDGERIAYATNETDDFD 183

Query: 415 GSKLYSIDLNG---RNETLINTPAYASDPQWVG 444
              +Y  + +G   RN +L    A ++   W  
Sbjct: 184 NIDVYVANADGSEPRNLSLGEVGAESAPMDWGP 216



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 77/197 (39%), Gaps = 7/197 (3%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             +N L V+D +   +   +         +  R+  +  +V +   D+    +  +    
Sbjct: 43  TGRNELHVLDVETGTLEQWSDGDVPRNARWFLRWDADGDRVFF-HQDEGGDEQNDIYALS 101

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              A + +       +    S +G+  L +  +D  M+ Y  D  S    +LT+      
Sbjct: 102 RAGAVESVVEIDGQAVLNDVSDDGESLLFTSNRDGQMNAYRYDCTSEEVTKLTDYERAVG 161

Query: 306 SASYSPDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLI 361
           + S+SPD  +I + ++         +YV  ++GS+ + +S  +  +   P  W P G+ +
Sbjct: 162 ALSFSPDGERIAYATNETDDFDNIDVYVANADGSEPRNLSLGEVGAESAPMDWGPDGERL 221

Query: 362 AFTKFSGEKFAIGVMKK 378
             T  + +    GV+  
Sbjct: 222 LVTDNTTDLSRAGVVDL 238



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 13/124 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGA----------NIRYLTPSRDQILFEPRFSPNQQKVAYA 229
              + VS   ++ L   +RDG                    ++ +    FSP+ +++AYA
Sbjct: 116 AVLNDVSDDGESLLFTSNRDGQMNAYRYDCTSEEVTKLTDYERAVGALSFSPDGERIAYA 175

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFR--SMILAP-RFSSNGKRALISVQKDEAMDIYS 286
           T + +D   + +     D +  R  +        AP  +  +G+R L++    +      
Sbjct: 176 TNETDDFDNIDVYVANADGSEPRNLSLGEVGAESAPMDWGPDGERLLVTDNTTDLSRAGV 235

Query: 287 VDLQ 290
           VDL 
Sbjct: 236 VDLA 239


>gi|119509317|ref|ZP_01628467.1| WD-40 repeat protein [Nodularia spumigena CCY9414]
 gi|119466159|gb|EAW47046.1| WD-40 repeat protein [Nodularia spumigena CCY9414]
          Length = 1544

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 52/260 (20%), Positives = 101/260 (38%), Gaps = 22/260 (8%)

Query: 166  ITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            +  + G+  + + F  +S    +G    +  +  RDG  +  L   ++ +L    FSPN 
Sbjct: 972  LREKTGEGFNSVAFSPDSTLIATGSWDKTAKIWSRDGKLLHTLDKHKEAVLEV-AFSPNS 1030

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            Q +A A++D+     V L  +R  +    +   +  + +  FS +GK    +V  D  M 
Sbjct: 1031 QLLATASWDN----TVKLW-SRDGKLLHTLDKHKDKVNSVTFSPDGKLIA-TVGWDNTMK 1084

Query: 284  IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            ++  +L        T    +  S S+SPD  QI       G   + +    G + + +  
Sbjct: 1085 LW--NLDGKELRTFTGHKDMIWSVSFSPDGKQIA---TAGGDRTVKIWNLEGKELRTLI- 1138

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGR 402
              +      ++SP G LIA          + +    G +   L      + +  +SP G 
Sbjct: 1139 GHQNGVNSVIFSPDGKLIATAS---GDKTVKLWNSKGKELETLYGHTDAVNSVAFSPDGT 1195

Query: 403  SLIFSRKKDGDTGSKLYSID 422
            S+        D  +K++  +
Sbjct: 1196 SIA---TAGSDRTAKIWRFN 1212



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 58/294 (19%), Positives = 114/294 (38%), Gaps = 34/294 (11%)

Query: 129  RLWDVK---DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
             ++D+    + K I    +  +   W  +   +     Q +   KG    R+  +S S  
Sbjct: 1225 EVFDLVFSPNGKYIATASWDKTAKLWSIVGDKL-----QELRTFKG-HKGRVNKLSFSPD 1278

Query: 186  SGIIKNSLC-----VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
              +I  +       + + DG   + L   +D + +   FSP+ Q +A A+ D      V 
Sbjct: 1279 GQLIATTSWDKTAKLWNLDGTLHKTLIGHKDTV-WSINFSPDGQLIATASEDK----TVK 1333

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TN 299
            L + R     K +    S++ +  FS +GKR   +   D+ + I+S+D      + L  +
Sbjct: 1334 LWN-RDGELLKTLPRQSSVVNSAVFSPDGKRIA-TAGWDKTVKIWSID--GKELKILDGH 1389

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            T  IN + ++S D   I   S       + +   +G   + + +  +    +  +SP G 
Sbjct: 1390 TSGIN-NLTFSRDGKLIASAS---WDNTVKIWHLDGQKTQTL-EGHKNVVHNVAFSPDGK 1444

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKD 411
             IA          + +   DG +E   +        +  +SP G++L    + D
Sbjct: 1445 FIATASGDNT---VKIWNLDGKKELRTLRGYKDAVWSVRFSPDGKTLATGSRHD 1495



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 84/231 (36%), Gaps = 19/231 (8%)

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
              +      D IL    FSP+ Q +A A+ D    ++++ +D +      R         
Sbjct: 925  REKNRLAEHDGILESVSFSPDGQFIATASRD--KTVKIWSLDGKKQPVMLREKTGEGFN- 981

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            +  FS +      +   D+   I+S D        L       +  ++SP+S  +   S 
Sbjct: 982  SVAFSPDSTLIA-TGSWDKTAKIWSRD--GKLLHTLDKHKEAVLEVAFSPNSQLLATAS- 1037

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                  + +   +G     + + K+       +SP G LIA   +      +     DG 
Sbjct: 1038 --WDNTVKLWSRDGKLLHTLDKHKD-KVNSVTFSPDGKLIATVGWDNT-MKLW--NLDGK 1091

Query: 382  QERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            + R      ++  + ++SP G+ +       GD   K++  +L G+    +
Sbjct: 1092 ELRTFTGHKDMIWSVSFSPDGKQIA---TAGGDRTVKIW--NLEGKELRTL 1137



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 108/302 (35%), Gaps = 61/302 (20%)

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              N++ + + DG  +R  T  +D I +   FSP+ +++A           V + +     
Sbjct: 1079 WDNTMKLWNLDGKELRTFTGHKDMI-WSVSFSPDGKQIA----TAGGDRTVKIWNLEGKE 1133

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                IG+   +  +  FS +GK    +   D+ + ++  + +    E L        S +
Sbjct: 1134 LRTLIGHQNGVN-SVIFSPDGKLIA-TASGDKTVKLW--NSKGKELETLYGHTDAVNSVA 1189

Query: 309  YSPDSSQIV------------FES----------------------------DREGKEQL 328
            +SPD + I             F S                              +   +L
Sbjct: 1190 FSPDGTSIATAGSDRTAKIWRFNSPNSIIVRGHEDEVFDLVFSPNGKYIATASWDKTAKL 1249

Query: 329  YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
            + +  +   + R  +  +       +SP G LIA T +        +   DG+  + L+ 
Sbjct: 1250 WSIVGDKLQELRTFKGHKGRVNKLSFSPDGQLIATTSWDKTA---KLWNLDGTLHKTLIG 1306

Query: 388  EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-----GRNETLINTPAYASDPQW 442
                + +  +SP G+ +  + +   D   KL++ D        R  +++N+  ++ D + 
Sbjct: 1307 HKDTVWSINFSPDGQLIATASE---DKTVKLWNRDGELLKTLPRQSSVVNSAVFSPDGKR 1363

Query: 443  VG 444
            + 
Sbjct: 1364 IA 1365



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 83/192 (43%), Gaps = 16/192 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +     ++ + +RDG  ++ L P +  ++    FSP+ +++A A +D    ++++ +D  
Sbjct: 1325 TASEDKTVKLWNRDGELLKTL-PRQSSVVNSAVFSPDGKRIATAGWD--KTVKIWSID-- 1379

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +  K +    S I    FS +GK    S   D  + I+ +D     T+ L     +  
Sbjct: 1380 -GKELKILDGHTSGINNLTFSRDGKLIA-SASWDNTVKIWHLD--GQKTQTLEGHKNVVH 1435

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            + ++SPD     F +   G   + +   +G  + R  +  + + +   +SP G  +A   
Sbjct: 1436 NVAFSPDGK---FIATASGDNTVKIWNLDGKKELRTLRGYKDAVWSVRFSPDGKTLA--- 1489

Query: 366  FSGEKFAIGVMK 377
             +G +  I V  
Sbjct: 1490 -TGSRHDIVVWH 1500


>gi|218130952|ref|ZP_03459756.1| hypothetical protein BACEGG_02554 [Bacteroides eggerthii DSM 20697]
 gi|217986824|gb|EEC53156.1| hypothetical protein BACEGG_02554 [Bacteroides eggerthii DSM 20697]
          Length = 705

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 99/268 (36%), Gaps = 24/268 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV      N L VM+ DG+N R +T    Q   +P +  +  K+A+   +     +++ 
Sbjct: 73  YSVPENKSNNELFVMNTDGSNNRQITCDNWQ-ESQPTWIKDGAKIAFLCNETGSS-QIWE 130

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----KDEAMDIYSVDLQSNATERL 297
           M+     A K++  +   I    FS +GK+ L   Q    +  A     +   +     +
Sbjct: 131 MNPD-GTARKQLTQYDGDIEGFSFSPDGKKLLFIAQVKTVQSTADKHPDLPKATGII--V 187

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T+ ++ +    +   +    F +D +G     +      +                WSP 
Sbjct: 188 TDLMYKHWD-EWVTTAPHP-FVADFDGNNISNIQDILDGEPYESPMKPWGGIEQLAWSPS 245

Query: 358 GDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIF- 406
            D IA+T                I +      +   + E+       P +SP G+ + + 
Sbjct: 246 SDKIAYTCRKKTGLAYAISTNSDIYIYDLATKKTENITEENKGYDTNPQYSPDGKYIAWQ 305

Query: 407 SRKKDGDTG--SKLYSIDLNGRNETLIN 432
           S ++DG     ++L+ +DL    +  ++
Sbjct: 306 SMERDGYEADLNRLFIMDLETGEKRFVS 333



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 84/247 (34%), Gaps = 61/247 (24%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I +   S + K+   SV      +     +++ ++   +   ++T   +     ++  
Sbjct: 52  GRIGSVVVSPDEKQIAYSVAYYSVPENKSNNELFVMNTDGSNNRQITCDNWQESQPTWIK 111

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D ++I F  +  G  Q++ M  +G+ +K+++Q  +       +SP G  + F        
Sbjct: 112 DGAKIAFLCNETGSSQIWEMNPDGTARKQLTQY-DGDIEGFSFSPDGKKLLFIAQVKTVQ 170

Query: 372 ---------------------------------AIGVMKKDG---SQERLLVEDSNLQAP 395
                                               V   DG   S  + +++    ++P
Sbjct: 171 STADKHPDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNNISNIQDILDGEPYESP 230

Query: 396 ----------TWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLIN--TPAYA 437
                      WSPS   + ++ RKK G      T S +Y  DL  +    I      Y 
Sbjct: 231 MKPWGGIEQLAWSPSSDKIAYTCRKKTGLAYAISTNSDIYIYDLATKKTENITEENKGYD 290

Query: 438 SDPQWVG 444
           ++PQ+  
Sbjct: 291 TNPQYSP 297



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 102/295 (34%), Gaps = 61/295 (20%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------DD 233
           +    + +  M+ DG   + LT     I     FSP+ +K+ +               D 
Sbjct: 121 NETGSSQIWEMNPDGTARKQLTQYDGDIEGF-SFSPDGKKLLFIAQVKTVQSTADKHPDL 179

Query: 234 EDILRVYLMDTRIDRAPKRIG--------NFRSMILA----------------P------ 263
                + + D       + +         +F    ++                P      
Sbjct: 180 PKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNNISNIQDILDGEPYESPMKPWGGIEQ 239

Query: 264 -RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLFINISASYSPDS 313
             +S +  +   + +K            DIY  DL +  TE +T      + +  YSPD 
Sbjct: 240 LAWSPSSDKIAYTCRKKTGLAYAISTNSDIYIYDLATKKTENITEENKGYDTNPQYSPDG 299

Query: 314 SQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             I ++S +R+G      +L++M     +++ +S+  E++    +W+     I F     
Sbjct: 300 KYIAWQSMERDGYEADLNRLFIMDLETGEKRFVSRSFESNVDAFLWNKNSQSIYFIGVWH 359

Query: 369 EKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +  I  +   D  +   L  D      + +  G  +I +++     G ++Y+++
Sbjct: 360 GETQIYNINLADNDRLTQLT-DGMYDYASLALCGDKVI-AKRHSMSMGDEIYAVN 412


>gi|182435850|ref|YP_001823569.1| hypothetical protein SGR_2057 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178464366|dbj|BAG18886.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
           13350]
          Length = 1063

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 53/287 (18%), Positives = 101/287 (35%), Gaps = 39/287 (13%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    SL + D D                +P  S     + + +  D    +VY+ D  
Sbjct: 38  AGTEHRSLGLADGDDTTDPLFGDGPAHYDQDP--SARGDVLVFTSLRDSARPQVYVRD-- 93

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-----AMDIYSVDLQSNATERLTNT 300
            D + +R+   R     P  S +G+  +    +         D++SV +  +   RL++T
Sbjct: 94  ADGSVRRLTTDRDAA-HPELSPDGRTVVFDSAEPGPGGTVQRDLWSVGVDGSDLRRLSDT 152

Query: 301 LFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-- 356
                S ++SPD ++I +    D     Q++     G  + RIS        +P W+P  
Sbjct: 153 PDNEESPTWSPDGTRIAYACDGDTLRGWQIFEQAVAGGPRTRISDGPAGDATEPSWNPVD 212

Query: 357 ---QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-------------QAPTWSPS 400
              +  L+A+T  +     +     DG++ R                     ++ +W P 
Sbjct: 213 DDARRGLVAYTLTTDPDPNV----DDGTELRATQGIGTDRPLLAGAHAEWGTRSASWLPD 268

Query: 401 GRSLIFSRKK---DGDTGSKLYSIDL--NGRNETLINTPAYASDPQW 442
           G  ++F         D    +Y +    +   + L+N       P W
Sbjct: 269 GEDIVFLSPYHTCGCDDFDHVYRVTAFQDEAPDQLVNENREVGPPTW 315



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 96/301 (31%), Gaps = 58/301 (19%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQ--ILFEPRFSPNQQKVAYATYD 232
           RI+              + + D DG N   L    R+      +P FSP+  ++A+    
Sbjct: 406 RIVVTRFEDGDAGRIERIWMTDADGRNAAPLPLDGREPGDWDTDPTFSPDGTRLAFTRTS 465

Query: 233 DE------DILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRALISVQK---- 278
                      R+ + D         I    G        P +SS+G     +  +    
Sbjct: 466 PGGVGDAAGPSRILIADVATGAILDEIQPPEGQAAGDDAQPTWSSDGVNLAFTRSQVING 525

Query: 279 -DEAMDIYSVDLQSNATER-LTNT------LFINISASYSPDSSQIVFESDREGKE---- 326
                 I+ V L     +R L+ T        I+ S ++SPD  ++ F     G      
Sbjct: 526 NGANKHIWVVPLADLGRQRDLSATICPGDCEVIDDSPAFSPDGLKVAFNRKDGGGRVNHQ 585

Query: 327 -QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +    G   + +    +        +P G  +                 D S    
Sbjct: 586 AGVLIKPLRGGGCRVVLPSVQKD------NPDGCDLPV--------------PDTS---- 621

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS--KLYSIDL-NGRNETLINT-PAYASDPQ 441
           +      +   WSP G  L+F+ +++    S  +L  +D+ +G    L NT      +P 
Sbjct: 622 VTGPHQPRDVAWSPDGGKLLFTSRREFPANSMEQLSVLDIASGDVAPLDNTHEGRQKEPS 681

Query: 442 W 442
           +
Sbjct: 682 Y 682



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 32/182 (17%)

Query: 265 FSSNGKRALISVQKDEAM----DIYSVDLQSNATERLT----NTLFINISASYSPDSSQI 316
           ++ +G+R +++  +D        I+  D        L          +   ++SPD +++
Sbjct: 400 YTPDGRRIVVTRFEDGDAGRIERIWMTDADGRNAAPLPLDGREPGDWDTDPTFSPDGTRL 459

Query: 317 VFES-------DREGKEQLYVMQSNGS----DQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            F         D  G  ++ +          + +            P WS  G  +AFT+
Sbjct: 460 AFTRTSPGGVGDAAGPSRILIADVATGAILDEIQPPEGQAAGDDAQPTWSSDGVNLAFTR 519

Query: 366 F-----SGEKFAIGVMKK-DGSQERLLVED---SNLQ----APTWSPSGRSLIFSRKKDG 412
                 +G    I V+   D  ++R L       + +    +P +SP G  + F+RK  G
Sbjct: 520 SQVINGNGANKHIWVVPLADLGRQRDLSATICPGDCEVIDDSPAFSPDGLKVAFNRKDGG 579

Query: 413 DT 414
             
Sbjct: 580 GR 581



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 10/137 (7%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KF 371
           + ++ F     G E   +  ++G D          +++D   S +GD++ FT      + 
Sbjct: 32  AGRVAFA----GTEHRSLGLADGDDTTDPLFGDGPAHYDQDPSARGDVLVFTSLRDSARP 87

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS---KLYSIDLNGRNE 428
            + V   DGS  R L  D +   P  SP GR+++F   + G  G+    L+S+ ++G + 
Sbjct: 88  QVYVRDADGS-VRRLTTDRDAAHPELSPDGRTVVFDSAEPGPGGTVQRDLWSVGVDGSDL 146

Query: 429 TLI-NTPAYASDPQWVG 444
             + +TP     P W  
Sbjct: 147 RRLSDTPDNEESPTWSP 163



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 97/350 (27%), Gaps = 53/350 (15%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR--ILFVSESVVSGII 189
           D     QI  +     P +  +I+   + D  +       D   R  + +   +     +
Sbjct: 175 DTLRGWQIFEQAVAGGPRT--RISDGPAGDATEPSWNPVDDDARRGLVAYTLTTDPDPNV 232

Query: 190 K--NSLCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDD----EDILRVYLM 242
                L      G +   L  +  +       + P+ + + + +       +D   VY +
Sbjct: 233 DDGTELRATQGIGTDRPLLAGAHAEWGTRSASWLPDGEDIVFLSPYHTCGCDDFDHVYRV 292

Query: 243 DTRIDRAPKRIGNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
               D AP ++ N    +  P +    G   +  +  D               + L    
Sbjct: 293 TAFQDEAPDQLVNENREVGPPTWFVPAGTVVVPRITPDPETVE--------KPDELLAAA 344

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--------RISQDKEASYFDPV 353
            I        D S       R+    +                   R     +  +    
Sbjct: 345 QIVTLQDVRQDGSDP-----RDLGLTILKEDPEARTNTDHAKNPLFRPRPGYDPWHERQN 399

Query: 354 WSPQGDLIAFTKFSGEKF----AIGVMKKDGSQERLLVEDSN-----LQAPTWSPSGRSL 404
           ++P G  I  T+F          I +   DG     L  D          PT+SP G  L
Sbjct: 400 YTPDGRRIVVTRFEDGDAGRIERIWMTDADGRNAAPLPLDGREPGDWDTDPTFSPDGTRL 459

Query: 405 IFSRKKDGDTG-----SKLYSIDL-NGRNETLINTP-----AYASDPQWV 443
            F+R   G  G     S++   D+  G     I  P        + P W 
Sbjct: 460 AFTRTSPGGVGDAAGPSRILIADVATGAILDEIQPPEGQAAGDDAQPTWS 509


>gi|145529465|ref|XP_001450517.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418136|emb|CAK83120.1| unnamed protein product [Paramecium tetraurelia]
          Length = 419

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 115/339 (33%), Gaps = 54/339 (15%)

Query: 113 TGRVIKEGKDR----LRVEF-------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
           TG+   +          V F       RLWDVK  +Q                 H  S +
Sbjct: 8   TGQYKAKLDGHSREVYSVNFSPDDNSIRLWDVKTGQQKAKLD-----------GH--SRE 54

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +Y       G           ++ SG    S+ + D      +       + ++   FSP
Sbjct: 55  VYSVNFSPDG----------TTLASGSADKSIRLWDVKTGQQKAKLDGHSREVYSVNFSP 104

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   +A  + D      + L D +  +   ++      + +  FS +G     S   D +
Sbjct: 105 DGTTLASGSADK----SIRLWDVKTGQQKAKLDGHYDRVFSVNFSPDGTTLA-SGSYDNS 159

Query: 282 MDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + ++  D+++   + + +       S ++SPD + +   S   G   + +       QK 
Sbjct: 160 IRLW--DVKTGQQKAILDGHSSYVYSVNFSPDGTTLASGS---GDNSIRLWDVKTGQQKA 214

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WS 398
           I        +   +SP G  +A          I +      Q++  ++  +    +  +S
Sbjct: 215 ILDGHSREVYSVNFSPDGTTLASGSADKS---IRLWDVKTGQQKAKLDGHSDYVMSVNFS 271

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           P G +L        D   +L+ +   G+ + +++  +  
Sbjct: 272 PDGTTLA---SGSEDNSIRLWDVK-TGQQKAILDGHSNG 306



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 89/270 (32%), Gaps = 37/270 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  +Q                 H   D ++       G     
Sbjct: 107 TTLASGSADKSIRLWDVKTGQQKAKLD-----------GHY--DRVFSVNFSPDG----- 148

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG   NS+ + D      + +       ++   FSP+   +A  + D+   
Sbjct: 149 -----TTLASGSYDNSIRLWDVKTGQQKAILDGHSSYVYSVNFSPDGTTLASGSGDN--- 200

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D +  +    +      + +  FS +G     S   D+++ ++  D+++   + 
Sbjct: 201 -SIRLWDVKTGQQKAILDGHSREVYSVNFSPDGTTLA-SGSADKSIRLW--DVKTGQQKA 256

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L       +S ++SPD + +   S+      + +       QK I             S
Sbjct: 257 KLDGHSDYVMSVNFSPDGTTLASGSE---DNSIRLWDVKTGQQKAILDGHSNGILSVNLS 313

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           P G  +A +        I +     S+E L
Sbjct: 314 PDGTTLASSSIDNS---IRLWDLKTSKEIL 340


>gi|242826060|ref|XP_002488565.1| G-protein beta WD-40 repeats containing protein, putative
           [Talaromyces stipitatus ATCC 10500]
 gi|218712383|gb|EED11809.1| G-protein beta WD-40 repeats containing protein, putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 567

 Score =  100 bits (248), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 59/372 (15%), Positives = 130/372 (34%), Gaps = 54/372 (14%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVL----------------VTGRVIK 118
            S + +L++     Q + +       + WN   A  L                + G+ + 
Sbjct: 97  HSGLVHLVAFSPDGQTLASGSKDDTVKFWNVKTASELKTLRGHSNSVYLAAFSLDGQTLA 156

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
            G     V  +LW+VK   ++   +            H  S+ +Y       G       
Sbjct: 157 LGSGDDTV--KLWNVKTSCELQTLQ-----------GH--SNSVYLVAFSPDG------- 194

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
              +++ S    +++ +      +           ++   FSP+ Q +A  +YDD     
Sbjct: 195 ---QTLASNSGDDTVKLWSVKTGSELQTLQGHSNSVYSAAFSPDGQTLASGSYDD----T 247

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V L D +     + +    S + +  FS +G+    S   D  + ++++    +  + L 
Sbjct: 248 VKLWDVKTGSELQTLSGVSSSLDSVAFSPDGQTLA-SYSGDNTVRLWNI-KTGSELQTLR 305

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             L    S ++SPD   +   S+    + + +       + +  +          +SP G
Sbjct: 306 GHLGWVDSVAFSPDGQTLASGSE---DDTVKLWSVKTGFELQTLRGHLGWVNSVAFSPDG 362

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +A          +  +K     + L    S + +  +SP G++L       G+   KL
Sbjct: 363 QTLASGSRDDT-IKLWDVKTGSELQTLRSHSSWINSVAFSPDGQTLA---SGSGNGTVKL 418

Query: 419 YSIDLNGRNETL 430
           ++++ +   +TL
Sbjct: 419 WNVETSSELQTL 430



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 53/324 (16%), Positives = 112/324 (34%), Gaps = 42/324 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +        V  +LW VK   ++   +            H  S+ +Y +     G  
Sbjct: 194 GQTLASNSGDDTV--KLWSVKTGSELQTLQ-----------GH--SNSVYSAAFSPDG-- 236

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                   +++ SG   +++ + D    +           L    FSP+ Q +A  + D+
Sbjct: 237 --------QTLASGSYDDTVKLWDVKTGSELQTLSGVSSSLDSVAFSPDGQTLASYSGDN 288

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                V L + +     + +      + +  FS +G+    S  +D+ + ++SV      
Sbjct: 289 ----TVRLWNIKTGSELQTLRGHLGWVDSVAFSPDGQTLA-SGSEDDTVKLWSV-KTGFE 342

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            + L   L    S ++SPD   +   S     + + +       + +  +   +      
Sbjct: 343 LQTLRGHLGWVNSVAFSPDGQTLASGSR---DDTIKLWDVKTGSELQTLRSHSSWINSVA 399

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKD 411
           +SP G  +A    +G    + +   + S E   ++         T+SP G++L      D
Sbjct: 400 FSPDGQTLASGSGNGT---VKLWNVETSSELQTLQGHLESVFLVTFSPDGQTLASGSYDD 456

Query: 412 GDTGSKLYSIDLNGRNETLINTPA 435
                KL+ +      +TL     
Sbjct: 457 ---TVKLWDVKTGSELQTLRGHSG 477



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 98/284 (34%), Gaps = 35/284 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       +LWDVK   ++  +      +S   +A   S D               
Sbjct: 237 QTLASGSYDDTVKLWDVKTGSEL--QTLSGVSSSLDSVA--FSPD--------------- 277

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                +++ S    N++ + +    +           +    FSP+ Q +A  + DD   
Sbjct: 278 ----GQTLASYSGDNTVRLWNIKTGSELQTLRGHLGWVDSVAFSPDGQTLASGSEDD--- 330

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             V L   +     + +      + +  FS +G+    S  +D+ + ++  D+++ +  +
Sbjct: 331 -TVKLWSVKTGFELQTLRGHLGWVNSVAFSPDGQTLA-SGSRDDTIKLW--DVKTGSELQ 386

Query: 297 -LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L +      S ++SPD   +   S   G   + +     S + +  Q    S F   +S
Sbjct: 387 TLRSHSSWINSVAFSPDGQTLASGS---GNGTVKLWNVETSSELQTLQGHLESVFLVTFS 443

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           P G  +A   +      +  +K     + L     ++ +  ++P
Sbjct: 444 PDGQTLASGSYDDTV-KLWDVKTGSELQTLRGHSGSIDSVAFTP 486



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 96/263 (36%), Gaps = 13/263 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG   +++   +   A+           ++   FS + Q +A  + DD     V L
Sbjct: 111 QTLASGSKDDTVKFWNVKTASELKTLRGHSNSVYLAAFSLDGQTLALGSGDD----TVKL 166

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            + +     + +    + +    FS +G+    S   D+ + ++SV    +  + L    
Sbjct: 167 WNVKTSCELQTLQGHSNSVYLVAFSPDGQTLA-SNSGDDTVKLWSV-KTGSELQTLQGHS 224

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               SA++SPD   +   S     + + +       + +      +S     +SP G  +
Sbjct: 225 NSVYSAAFSPDGQTLASGSY---DDTVKLWDVKTGSELQTLSGVSSSLDSVAFSPDGQTL 281

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A +        +  +K     + L      + +  +SP G++L    + D     KL+S+
Sbjct: 282 A-SYSGDNTVRLWNIKTGSELQTLRGHLGWVDSVAFSPDGQTLASGSEDD---TVKLWSV 337

Query: 422 DLNGRNETLINTPAYASDPQWVG 444
                 +TL     + +   +  
Sbjct: 338 KTGFELQTLRGHLGWVNSVAFSP 360



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 92/242 (38%), Gaps = 17/242 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                   ++    FSP+ Q +A  + DD     V   + +     K +    + +    
Sbjct: 92  QTLEGHSGLVHLVAFSPDGQTLASGSKDD----TVKFWNVKTASELKTLRGHSNSVYLAA 147

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
           FS +G+   +    D+ + ++  +++++   +       ++   ++SPD   +   S   
Sbjct: 148 FSLDGQTLAL-GSGDDTVKLW--NVKTSCELQTLQGHSNSVYLVAFSPDGQTLASNS--- 201

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G + + +       + +  Q    S +   +SP G  +A   +      +  +K  GS+ 
Sbjct: 202 GDDTVKLWSVKTGSELQTLQGHSNSVYSAAFSPDGQTLASGSYDDTV-KLWDVKT-GSEL 259

Query: 384 RLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           + L    S+L +  +SP G++L       GD   +L++I      +TL     +     +
Sbjct: 260 QTLSGVSSSLDSVAFSPDGQTLA---SYSGDNTVRLWNIKTGSELQTLRGHLGWVDSVAF 316

Query: 443 VG 444
             
Sbjct: 317 SP 318


>gi|329928136|ref|ZP_08282082.1| conserved domain protein [Paenibacillus sp. HGF5]
 gi|328938013|gb|EGG34412.1| conserved domain protein [Paenibacillus sp. HGF5]
          Length = 454

 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 57/285 (20%), Positives = 107/285 (37%), Gaps = 24/285 (8%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVM-DRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           T   G     I + S    S      + +   RDG + + LT         P +SP++++
Sbjct: 3   TVSHGIVQEWIAYTSNRGGS----FDIWLYRPRDGFDFQ-LTQGLGAEFSVPYWSPDRRR 57

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A+      +   V+++DT +     RI       L   +SSN +         +   I 
Sbjct: 58  IAFI----GNGNVVHVLDT-VSFTVARIDQIEPYTLL-DWSSNSRSLAYV----KNDRIV 107

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQD 344
             D  S+ +  +  T   +  A + P   +++F S D  G  QLY ++++G+++++I+  
Sbjct: 108 IYDTASHRSYSIPETGAKD--AQWFPSGMELLFASPDSGGVMQLYRIRTDGTERRQITHL 165

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGR 402
            +    D   SP G    +T        I  +         L          P WSP  +
Sbjct: 166 TDGPLHDVRISPDGTFALYTSPGASISMISTVDLANGTIYALEGGPLAKNYFPVWSPDSK 225

Query: 403 SLIFSRK-KDGDTGSKLYSIDL-NGRNETLINTPAYASDPQ-WVG 444
           S+ +S           L  ID  +G+++  +      + P  W  
Sbjct: 226 SIAYSATAYIEPNYYSLIQIDSRSGQDQRTVAVSNCFATPVDWSP 270



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 79/225 (35%), Gaps = 11/225 (4%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            ++  D A+ R      +    + ++ P+  ++ +A+ D   ++++Y + T      +  
Sbjct: 105 RIVIYDTASHRS-YSIPETGAKDAQWFPSGMELLFASPDSGGVMQLYRIRTDGTERRQIT 163

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPD 312
                 +   R S +G  AL +        I +VDL +     L       N    +SPD
Sbjct: 164 HLTDGPLHDVRISPDGTFALYTSPGASISMISTVDLANGTIYALEGGPLAKNYFPVWSPD 223

Query: 313 SSQIVFESDREGKEQLY---VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---F 366
           S  I + +    +   Y    + S     +R             WSP G  IA+      
Sbjct: 224 SKSIAYSATAYIEPNYYSLIQIDSRSGQDQRTVAVSNCFATPVDWSPDGAKIAYLSGCTV 283

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---IFSR 408
                 + ++         +V    + A  WSP GR +   +F+ 
Sbjct: 284 EEFASQLWIVDIREQMPMNVVSGGRITALQWSPGGRKVPKSMFTS 328



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 66/194 (34%), Gaps = 16/194 (8%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
               +   +  +     R+I H     ++       G F       +     G   + + 
Sbjct: 143 SGGVMQLYRIRTDGTERRQITHLTDGPLHDVRISPDGTF-------ALYTSPGASISMIS 195

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY--ATYDDEDILRVYLMDTRIDRAPKR 252
            +D     I  L        + P +SP+ + +AY    Y + +   +  +D+R  +  + 
Sbjct: 196 TVDLANGTIYALEGGPLAKNYFPVWSPDSKSIAYSATAYIEPNYYSLIQIDSRSGQDQRT 255

Query: 253 IGNFRSMILAPRFSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           +           +S +G +         ++ A  ++ VD++      + +   I  +  +
Sbjct: 256 VAVSNCFATPVDWSPDGAKIAYLSGCTVEEFASQLWIVDIREQMPMNVVSGGRI-TALQW 314

Query: 310 SPDSSQI---VFES 320
           SP   ++   +F S
Sbjct: 315 SPGGRKVPKSMFTS 328


>gi|326776475|ref|ZP_08235740.1| hypothetical protein SACT1_2307 [Streptomyces cf. griseus
           XylebKG-1]
 gi|326656808|gb|EGE41654.1| hypothetical protein SACT1_2307 [Streptomyces cf. griseus
           XylebKG-1]
          Length = 1080

 Score = 99.7 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 53/287 (18%), Positives = 101/287 (35%), Gaps = 39/287 (13%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    SL + D D                +P  S     + + +  D    +VY+ D  
Sbjct: 57  AGTEHRSLGLADGDDTTDPLFGDGPAHYDQDP--SARGDVLVFTSLRDSARPQVYVRD-- 112

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-----AMDIYSVDLQSNATERLTNT 300
            D + +R+   R     P  S +G+  +    +         D++SV +  +   RL++T
Sbjct: 113 ADGSVRRLTTDRDAA-HPELSPDGRTVVFDSAEPGPGGTVQRDLWSVGVDGSDLRRLSDT 171

Query: 301 LFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-- 356
                S ++SPD ++I +    D     Q++     G  + RIS        +P W+P  
Sbjct: 172 PDNEESPTWSPDGTRIAYACDGDTLRGWQIFEQAVAGGPRTRISDGPAGDATEPSWNPVD 231

Query: 357 ---QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-------------QAPTWSPS 400
              +  L+A+T  +     +     DG++ R                     ++ +W P 
Sbjct: 232 DDARRGLVAYTLTTDPDPNV----DDGTELRATQGIGTDRPLLAGAHAEWGTRSASWLPD 287

Query: 401 GRSLIFSRKK---DGDTGSKLYSIDL--NGRNETLINTPAYASDPQW 442
           G  ++F         D    +Y +    +   + L+N       P W
Sbjct: 288 GEDIVFLSPYHTCGCDDFDHVYRVTAFEDEAPDQLVNENREVGPPTW 334



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 96/301 (31%), Gaps = 58/301 (19%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQ--ILFEPRFSPNQQKVAYATYD 232
           RI+              + + D DG N   L    R+      +P FSP+  ++A+    
Sbjct: 425 RIVVTRFEDGDAGRIERIWMTDADGRNAAPLPLDGREPGDWDTDPTFSPDGTRLAFTRTS 484

Query: 233 DE------DILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRALISVQK---- 278
                      R+ + D         I    G        P +SS+G     +  +    
Sbjct: 485 PGGVGDAAGPSRILIADVATGAILDEIQPPEGQAAGDDAQPTWSSDGVNLAFTRSQVING 544

Query: 279 -DEAMDIYSVDLQSNATER-LTNT------LFINISASYSPDSSQIVFESDREGKE---- 326
                 I+ V L     +R L+ T        I+ S ++SPD  ++ F     G      
Sbjct: 545 NGANKHIWVVPLADLGRQRDLSATICPGDCEVIDDSPAFSPDGLKVAFNRKDGGGRVNHQ 604

Query: 327 -QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +    G   + +    +        +P G  +                 D S    
Sbjct: 605 AGVLIKPLRGGGCRVVLPSVQKD------NPDGCDLPV--------------PDTS---- 640

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS--KLYSIDL-NGRNETLINT-PAYASDPQ 441
           +      +   WSP G  L+F+ +++    S  +L  +D+ +G    L NT      +P 
Sbjct: 641 VTGPHQPRDVAWSPDGGKLLFTSRREFPANSMEQLSVLDIASGDVAPLDNTHEGRQKEPS 700

Query: 442 W 442
           +
Sbjct: 701 Y 701



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 65/182 (35%), Gaps = 32/182 (17%)

Query: 265 FSSNGKRALISVQKDEAM----DIYSVDLQSNATERLT----NTLFINISASYSPDSSQI 316
           ++ +G+R +++  +D        I+  D        L          +   ++SPD +++
Sbjct: 419 YTPDGRRIVVTRFEDGDAGRIERIWMTDADGRNAAPLPLDGREPGDWDTDPTFSPDGTRL 478

Query: 317 VFES-------DREGKEQLYVMQSNGS----DQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            F         D  G  ++ +          + +            P WS  G  +AFT+
Sbjct: 479 AFTRTSPGGVGDAAGPSRILIADVATGAILDEIQPPEGQAAGDDAQPTWSSDGVNLAFTR 538

Query: 366 F-----SGEKFAIGVMKK-DGSQERLLVED---SNLQ----APTWSPSGRSLIFSRKKDG 412
                 +G    I V+   D  ++R L       + +    +P +SP G  + F+RK  G
Sbjct: 539 SQVINGNGANKHIWVVPLADLGRQRDLSATICPGDCEVIDDSPAFSPDGLKVAFNRKDGG 598

Query: 413 DT 414
             
Sbjct: 599 GR 600



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 60/137 (43%), Gaps = 10/137 (7%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KF 371
           + ++ F     G E   +  ++G D          +++D   S +GD++ FT      + 
Sbjct: 51  AGRVAFA----GTEHRSLGLADGDDTTDPLFGDGPAHYDQDPSARGDVLVFTSLRDSARP 106

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS---KLYSIDLNGRNE 428
            + V   DGS  R L  D +   P  SP GR+++F   + G  G+    L+S+ ++G + 
Sbjct: 107 QVYVRDADGS-VRRLTTDRDAAHPELSPDGRTVVFDSAEPGPGGTVQRDLWSVGVDGSDL 165

Query: 429 TLI-NTPAYASDPQWVG 444
             + +TP     P W  
Sbjct: 166 RRLSDTPDNEESPTWSP 182



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 97/350 (27%), Gaps = 53/350 (15%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR--ILFVSESVVSGII 189
           D     QI  +     P +  +I+   + D  +       D   R  + +   +     +
Sbjct: 194 DTLRGWQIFEQAVAGGPRT--RISDGPAGDATEPSWNPVDDDARRGLVAYTLTTDPDPNV 251

Query: 190 K--NSLCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDD----EDILRVYLM 242
                L      G +   L  +  +       + P+ + + + +       +D   VY +
Sbjct: 252 DDGTELRATQGIGTDRPLLAGAHAEWGTRSASWLPDGEDIVFLSPYHTCGCDDFDHVYRV 311

Query: 243 DTRIDRAPKRIGNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
               D AP ++ N    +  P +    G   +  +  D               + L    
Sbjct: 312 TAFEDEAPDQLVNENREVGPPTWFVPAGTVVVPRITPDPETVE--------KPDELLAAA 363

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--------RISQDKEASYFDPV 353
            I        D S       R+    +                   R     +  +    
Sbjct: 364 QIVTLQDVRQDGSDP-----RDLGLTILKEDPEARTNTDHAKNPLFRPRPGYDPWHERQN 418

Query: 354 WSPQGDLIAFTKFSGEKF----AIGVMKKDGSQERLLVEDSN-----LQAPTWSPSGRSL 404
           ++P G  I  T+F          I +   DG     L  D          PT+SP G  L
Sbjct: 419 YTPDGRRIVVTRFEDGDAGRIERIWMTDADGRNAAPLPLDGREPGDWDTDPTFSPDGTRL 478

Query: 405 IFSRKKDGDTG-----SKLYSIDL-NGRNETLINTP-----AYASDPQWV 443
            F+R   G  G     S++   D+  G     I  P        + P W 
Sbjct: 479 AFTRTSPGGVGDAAGPSRILIADVATGAILDEIQPPEGQAAGDDAQPTWS 528


>gi|297158039|gb|ADI07751.1| putative WD-40 repeat protein [Streptomyces bingchenggensis BCW-1]
          Length = 1294

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 58/387 (14%), Positives = 123/387 (31%), Gaps = 56/387 (14%)

Query: 76   SDVFNLISQDSF---KQKITNPDSIPRFQDW--------NSLGAQVLVTGRVIKEGKDRL 124
            +     +   +F    + + +  +    + W         +L     V G V        
Sbjct: 887  TGHTEPVDSVAFSPDGRTLASGSNDKTVRLWNVATGKPRTALTGHAEVQGSVAFSPDGHT 946

Query: 125  RVE-----FRLWDVKDRKQ-----------------IIGKKFFSSPASWR-KIAHTISDD 161
                     +LW+V   K                    G+   S       ++    + +
Sbjct: 947  LASGGEGKIQLWNVTTGKLRTTLTGHYDGAISVAFSPDGRTLASGSNDEHVRLGDVATGE 1006

Query: 162  IYQSITGE-KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            +  ++TG   G  +  +   + ++ SG  +  + + D      R         +    FS
Sbjct: 1007 VRTTLTGHYDGAISVALSRDARTLASGGAEGKIWLWDVATGEPRTTLTGHTDAVGSVAFS 1066

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+ + +A  + D      V L D    +          M+ +  FS +G+    S   D+
Sbjct: 1067 PDGRTLASGSEDT----TVRLWDVATGKLRTTRTGQTDMVSSEAFSPDGRTLA-SGGNDK 1121

Query: 281  AMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQ 338
             + ++  D+ +      LT    +  S ++SPD   +       G +  + +        
Sbjct: 1122 HVRLW--DVATGKLRTTLTGQTDMVSSVAFSPDGRTLA----SGGNDKHVRLWDVATGKL 1175

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPT 396
            +        + +   +SP G  +A     G +  I +      + R  L    + + +  
Sbjct: 1176 RTTLTGHTDAVWSVAFSPDGRTLA---SGGAEGKIWLWDVATGELRATLTGHTNAVGSVA 1232

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +SP GR+L        D   +L+  DL
Sbjct: 1233 FSPDGRTLASGSD---DRTVRLWDGDL 1256



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 91/251 (36%), Gaps = 24/251 (9%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  L  +   G     +T   D +     FSP+ + +A    D +    V+L +    +
Sbjct: 620 GKVRLWDV-ATGRRRTIVTGHSDDVADSVAFSPDGRTLATGGADTK----VHLWNVVTGK 674

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISA 307
               +      + +  FS +G+         +   +   ++ +      LT   F++ S 
Sbjct: 675 LRATLTGHSDFVRSVAFSPDGRTVA---SGSDDKTVRLGNVATGELRTTLTGHNFVD-SV 730

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD   +       G+ ++ + +    + +              +SP G  +A     
Sbjct: 731 AFSPDGRTLA----GGGEGKIRLWEVATGELRATLTGHSDFVGSVAFSPDGRTLA----G 782

Query: 368 GEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G +  I +      ++R+ +      + +  +SP GR+L    +   DT  +L+++   G
Sbjct: 783 GGERKIRLWDVATGKQRITLTGHTEPVDSVAFSPDGRTLASGSQ---DTTVRLWNV-ATG 838

Query: 426 RNETLINTPAY 436
              T +   + 
Sbjct: 839 ELRTTLTGHSD 849



 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 94/291 (32%), Gaps = 19/291 (6%)

Query: 141  GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
            G+          ++    + ++  ++TG      S         ++G  +  + + D   
Sbjct: 736  GRTLAGGGEGKIRLWEVATGELRATLTGHSDFVGSVAFSPDGRTLAGGGERKIRLWDVAT 795

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
               R       + +    FSP+ + +A  + D      V L +         +      +
Sbjct: 796  GKQRITLTGHTEPVDSVAFSPDGRTLASGSQDT----TVRLWNVATGELRTTLTGHSDFV 851

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
             +  FS +G+    S   D+ + ++ V + S     LT       S ++SPD   +   S
Sbjct: 852  NSVAFSPDGRTLA-SGSSDKTVRLWKVAI-SRLRTTLTGHTEPVDSVAFSPDGRTLASGS 909

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +    + + +        +              +SP G  +A    SG +  I +     
Sbjct: 910  N---DKTVRLWNVATGKPRTALTGHAEVQGSVAFSPDGHTLA----SGGEGKIQLWNVTT 962

Query: 381  SQERLLVEDSNLQ--APTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNG 425
             + R  +        +  +SP GR+L         + GD  +      L G
Sbjct: 963  GKLRTTLTGHYDGAISVAFSPDGRTLASGSNDEHVRLGDVATGEVRTTLTG 1013



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 107/339 (31%), Gaps = 40/339 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRK---QIIGKKFFSSP----ASWRKIAHTISDDIYQSI 166
           GR +  G    +V   LW+V   K    + G   F          R +A    D   +  
Sbjct: 653 GRTLATGGADTKVH--LWNVVTGKLRATLTGHSDFVRSVAFSPDGRTVASGSDDKTVRLG 710

Query: 167 TGEKGD---------FNSRILF-VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
               G+         F   + F      ++G  +  + + +     +R         +  
Sbjct: 711 NVATGELRTTLTGHNFVDSVAFSPDGRTLAGGGEGKIRLWEVATGELRATLTGHSDFVGS 770

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             FSP+ + +A          ++ L D    +    +      + +  FS +G+    S 
Sbjct: 771 VAFSPDGRTLA-----GGGERKIRLWDVATGKQRITLTGHTEPVDSVAFSPDGRTLA-SG 824

Query: 277 QKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +D  + ++  ++ +      LT       S ++SPD   +   S  +   +L+ +    
Sbjct: 825 SQDTTVRLW--NVATGELRTTLTGHSDFVNSVAFSPDGRTLASGSS-DKTVRLWKVAI-- 879

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--Q 393
           S  +              +SP G  +A          + +      + R  +        
Sbjct: 880 SRLRTTLTGHTEPVDSVAFSPDGRTLASGSNDKT---VRLWNVATGKPRTALTGHAEVQG 936

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +  +SP G +L       G+   +L+++       TL  
Sbjct: 937 SVAFSPDGHTLA----SGGEGKIQLWNVTTGKLRTTLTG 971



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 79/230 (34%), Gaps = 23/230 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRF 265
                  +   +FSP+ + +A       +  +V L D    R    +      +  +  F
Sbjct: 594 LTGHTDAVGSVKFSPDGRTLA----SIGEGGKVRLWDVATGRRRTIVTGHSDDVADSVAF 649

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREG 324
           S +G+             ++  ++ +      LT       S ++SPD   +   SD   
Sbjct: 650 SPDGRTLA---TGGADTKVHLWNVVTGKLRATLTGHSDFVRSVAFSPDGRTVASGSD--- 703

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            ++   + +  + + R +           +SP G  +A     G +  I + +    + R
Sbjct: 704 -DKTVRLGNVATGELRTTLTGHNFVDSVAFSPDGRTLA----GGGEGKIRLWEVATGELR 758

Query: 385 LLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +   +    +  +SP GR+L       G+   +L+ +    +  TL  
Sbjct: 759 ATLTGHSDFVGSVAFSPDGRTLA----GGGERKIRLWDVATGKQRITLTG 804



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 65/197 (32%), Gaps = 16/197 (8%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SAS 308
           +R+      + + +FS +G+    S+ +   + ++  D+ +     +      ++  S +
Sbjct: 592 RRLTGHTDAVGSVKFSPDGRTLA-SIGEGGKVRLW--DVATGRRRTIVTGHSDDVADSVA 648

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +          ++++        +              +SP G  +A      
Sbjct: 649 FSPDGRTLA---TGGADTKVHLWNVVTGKLRATLTGHSDFVRSVAFSPDGRTVASGSDDK 705

Query: 369 EKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               + +      + R  +   N   +  +SP GR+L       G+   +L+ +      
Sbjct: 706 T---VRLGNVATGELRTTLTGHNFVDSVAFSPDGRTLA----GGGEGKIRLWEVATGELR 758

Query: 428 ETLINTPAYASDPQWVG 444
            TL     +     +  
Sbjct: 759 ATLTGHSDFVGSVAFSP 775


>gi|281410789|gb|ADA68808.1| HET-E [Podospora anserina]
          Length = 378

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 89/266 (33%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 60  QRVASGSGDKTIKIWDTASGTCTQTLEGHGNSVWSVAFSPDGQRVASGSGDK----TIKI 115

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 116 WDTASGTCTQTLEGHGGSVWSVAFSPDGQRVA-SGSDDKTIKIW--DTASGTCTQTLEGH 172

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S  +SPD  ++   SD      + +  +      +  +    S +   +SP    
Sbjct: 173 GGWVQSVVFSPDGQRVASGSD---DHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDDQR 229

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A     G    I +           +E     + +  +SP G+ +  S   DG    K+
Sbjct: 230 VASGSIDGT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGT--IKI 283

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 284 WDAASGTCTQTLEGHGGWVQSVAFSP 309



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 90/266 (33%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 18  QRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVASGSGDK----TIKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +    + + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 74  WDTASGTCTQTLEGHGNSVWSVAFSPDGQRVA-SGSGDKTIKIW--DTASGTCTQTLEGH 130

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   SD    + + +  +      +  +         V+SP G  
Sbjct: 131 GGSVWSVAFSPDGQRVASGSD---DKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A      +   I +           +E       +  +SP  + +  S   DG    K+
Sbjct: 188 VA---SGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDDQRVA-SGSIDGT--IKI 241

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 242 WDAASGTCTQTLEGHGGWVHSVAFSP 267



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 74/200 (37%), Gaps = 12/200 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ Q+VA  + D      + + DT      + +      + +  FS
Sbjct: 1   LEGHGSSVLSVAFSPDGQRVASGSDDK----TIKIWDTASGTGTQTLEGHGGSVWSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGK 325
            +G+R   S   D+ + I+  D  S    +       ++ S ++SPD  ++   S   G 
Sbjct: 57  PDGQRVA-SGSGDKTIKIW--DTASGTCTQTLEGHGNSVWSVAFSPDGQRVASGS---GD 110

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + +  +      +  +    S +   +SP G  +A +    +   I         + L
Sbjct: 111 KTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVA-SGSDDKTIKIWDTASGTCTQTL 169

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
                 +Q+  +SP G+ + 
Sbjct: 170 EGHGGWVQSVVFSPDGQRVA 189



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 12/225 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 144 QRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDH----TIKI 199

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS + +R   S   D  + I+  D  S    + L   
Sbjct: 200 WDAVSGTCTQTLEGHGDSVWSVAFSPDDQRVA-SGSIDGTIKIW--DAASGTCTQTLEGH 256

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S       + +  +      +  +          +SP G  
Sbjct: 257 GGWVHSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQR 313

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +A +  S +   I         + L      +Q+  +SP G+ + 
Sbjct: 314 VA-SGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVA 357



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 16/220 (7%)

Query: 170 KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G +   ++F    + V SG   +++ + D                ++   FSP+ Q+VA
Sbjct: 172 HGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDDQRVA 231

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D      + + D       + +      + +  FS +G+R   S   D  + I+  
Sbjct: 232 SGSIDG----TIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGTIKIW-- 284

Query: 288 DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D  S    + L        S ++SPD  ++   S     + + +  +      +  +   
Sbjct: 285 DAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSS---DKTIKIWDTASGTCTQTLEGHG 341

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                  +SP G  +A          I +           
Sbjct: 342 GWVQSVAFSPDGQRVASGSSDNT---IKIWDTASGTCTQT 378


>gi|325111049|ref|YP_004272117.1| hypothetical protein Plabr_4524 [Planctomyces brasiliensis DSM
           5305]
 gi|324971317|gb|ADY62095.1| WD40-like beta Propeller containing protein [Planctomyces
           brasiliensis DSM 5305]
          Length = 339

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 86/202 (42%), Gaps = 24/202 (11%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--QK 278
           P  Q+  ++      +     +    D +  ++ +  +   AP  S +G   + +     
Sbjct: 57  PGDQEFVFSAVGQGRLDL--YLLDLQDHSVVQLTDSPAYETAPAVSPDGVWIVYAAGQWP 114

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-----------SDREGKEQ 327
           D A  ++ + +     ++LT++   + + ++SPD   +VF            S+   +  
Sbjct: 115 DAADHLFRIRIDGEEKQQLTDSDGNDTAPAFSPDGKSVVFVRETEYRWGGLASNWTERGM 174

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +M ++GS+  RI   +E   F P +S  G  I +   + E+FA+ +  +D    R+  
Sbjct: 175 ICLMHADGSNL-RILVSEELDAFAPAFSADGRSIIY-SVNDERFAVSLDDQD----RVTK 228

Query: 388 EDSNLQA-PTWSPSGRSLIFSR 408
                 A P  SP+G  L++SR
Sbjct: 229 LPGPAGALP--SPNGEWLVYSR 248



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 97/197 (49%), Gaps = 25/197 (12%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EG 324
              +  + S      +D+Y +DLQ ++  +LT++     + + SPD   IV+ + +  + 
Sbjct: 57  PGDQEFVFSAVGQGRLDLYLLDLQDHSVVQLTDSPAYETAPAVSPDGVWIVYAAGQWPDA 116

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----------I 373
            + L+ ++ +G ++++++ D + +   P +SP G  + F + +  ++            I
Sbjct: 117 ADHLFRIRIDGEEKQQLT-DSDGNDTAPAFSPDGKSVVFVRETEYRWGGLASNWTERGMI 175

Query: 374 GVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLI 431
            +M  DGS  R+LV +  +  AP +S  GRS+I+S         + +++ L+ ++  T +
Sbjct: 176 CLMHADGSNLRILVSEELDAFAPAFSADGRSIIYS------VNDERFAVSLDDQDRVTKL 229

Query: 432 NTPAYA---SDPQWVGF 445
             PA A    + +W+ +
Sbjct: 230 PGPAGALPSPNGEWLVY 246



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 81/242 (33%), Gaps = 26/242 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                     P  SP+   + YA     D               +++ +      AP FS
Sbjct: 87  LTDSPAYETAPAVSPDGVWIVYAAGQWPDAADHLFRIRIDGEEKQQLTDSDGNDTAPAFS 146

Query: 267 SNGKRALI-----------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +GK  +            +    E   I  +    +    L +      + ++S D   
Sbjct: 147 PDGKSVVFVRETEYRWGGLASNWTERGMICLMHADGSNLRILVSEELDAFAPAFSADGRS 206

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIG 374
           I++       ++ + +  +  DQ R+++    +   P  SP G+ + +++      + + 
Sbjct: 207 IIYSV----NDERFAVSLD--DQDRVTKLPGPAGALP--SPNGEWLVYSRGHYARDYQVF 258

Query: 375 VMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKK-----DGDTGSKLYSIDLNGRNE 428
           ++     +E  L  E      P +S +G  + F  ++      G+    ++ I L G  +
Sbjct: 259 LLNTHSGEEVCLTPELGYCFKPWFSRTGDRIFFFHEEWPDGGTGEPKRNVWEIALEGNRQ 318

Query: 429 TL 430
             
Sbjct: 319 PR 320



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 83/189 (43%), Gaps = 23/189 (12%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            ++      A  + S++   + +   T++   +++ S  P   + VF +  +G+  LY++
Sbjct: 21  LVVVFWLGPAACLISLNPPGSHSRPHTHS---DVTVSLLPGDQEFVFSAVGQGRLDLYLL 77

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVE- 388
                   +++ D  A    P  SP G  I +   ++      +  ++ DG +++ L + 
Sbjct: 78  DLQDHSVVQLT-DSPAYETAPAVSPDGVWIVYAAGQWPDAADHLFRIRIDGEEKQQLTDS 136

Query: 389 DSNLQAPTWSPSGRSLIFSR---KKDGDTGSK------LYSIDLNGRNETLINT------ 433
           D N  AP +SP G+S++F R    + G   S       +  +  +G N  ++ +      
Sbjct: 137 DGNDTAPAFSPDGKSVVFVRETEYRWGGLASNWTERGMICLMHADGSNLRILVSEELDAF 196

Query: 434 -PAYASDPQ 441
            PA+++D +
Sbjct: 197 APAFSADGR 205


>gi|317476264|ref|ZP_07935514.1| prolyl oligopeptidase [Bacteroides eggerthii 1_2_48FAA]
 gi|316907538|gb|EFV29242.1| prolyl oligopeptidase [Bacteroides eggerthii 1_2_48FAA]
          Length = 697

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 99/268 (36%), Gaps = 24/268 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV      N L VM+ DG+N R +T    Q   +P +  +  K+A+   +     +++ 
Sbjct: 65  YSVPENKSNNELFVMNTDGSNNRQITCDNWQ-ESQPTWIKDGAKIAFLCNETGSS-QIWE 122

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----KDEAMDIYSVDLQSNATERL 297
           M+     A K++  +   I    FS +GK+ L   Q    +  A     +   +     +
Sbjct: 123 MNPD-GTARKQLTQYDGDIEGFSFSPDGKKLLFIAQVKTVQSTADKHPDLPKATGII--V 179

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T+ ++ +    +   +    F +D +G     +      +                WSP 
Sbjct: 180 TDLMYKHWD-EWVTTAPHP-FVADFDGNNISNIQDILDGEPYESPMKPWGGIEQLAWSPS 237

Query: 358 GDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIF- 406
            D IA+T                I +      +   + E+       P +SP G+ + + 
Sbjct: 238 SDKIAYTCRKKTGLAYAISTNSDIYIYDLATKKTENITEENKGYDTNPQYSPDGKYIAWQ 297

Query: 407 SRKKDGDTG--SKLYSIDLNGRNETLIN 432
           S ++DG     ++L+ +DL    +  ++
Sbjct: 298 SMERDGYEADLNRLFIMDLETGEKRFVS 325



 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 84/247 (34%), Gaps = 61/247 (24%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I +   S + K+   SV      +     +++ ++   +   ++T   +     ++  
Sbjct: 44  GRIGSVAVSPDEKQIAYSVAYYSVPENKSNNELFVMNTDGSNNRQITCDNWQESQPTWIK 103

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D ++I F  +  G  Q++ M  +G+ +K+++Q  +       +SP G  + F        
Sbjct: 104 DGAKIAFLCNETGSSQIWEMNPDGTARKQLTQY-DGDIEGFSFSPDGKKLLFIAQVKTVQ 162

Query: 372 ---------------------------------AIGVMKKDG---SQERLLVEDSNLQAP 395
                                               V   DG   S  + +++    ++P
Sbjct: 163 STADKHPDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNNISNIQDILDGEPYESP 222

Query: 396 ----------TWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLIN--TPAYA 437
                      WSPS   + ++ RKK G      T S +Y  DL  +    I      Y 
Sbjct: 223 MKPWGGIEQLAWSPSSDKIAYTCRKKTGLAYAISTNSDIYIYDLATKKTENITEENKGYD 282

Query: 438 SDPQWVG 444
           ++PQ+  
Sbjct: 283 TNPQYSP 289



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 102/295 (34%), Gaps = 61/295 (20%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------DD 233
           +    + +  M+ DG   + LT     I     FSP+ +K+ +               D 
Sbjct: 113 NETGSSQIWEMNPDGTARKQLTQYDGDIEGF-SFSPDGKKLLFIAQVKTVQSTADKHPDL 171

Query: 234 EDILRVYLMDTRIDRAPKRIG--------NFRSMILA----------------P------ 263
                + + D       + +         +F    ++                P      
Sbjct: 172 PKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNNISNIQDILDGEPYESPMKPWGGIEQ 231

Query: 264 -RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLFINISASYSPDS 313
             +S +  +   + +K            DIY  DL +  TE +T      + +  YSPD 
Sbjct: 232 LAWSPSSDKIAYTCRKKTGLAYAISTNSDIYIYDLATKKTENITEENKGYDTNPQYSPDG 291

Query: 314 SQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             I ++S +R+G      +L++M     +++ +S+  E++    +W+     I F     
Sbjct: 292 KYIAWQSMERDGYEADLNRLFIMDLETGEKRFVSRSFESNVDAFLWNKNSQSIYFIGVWH 351

Query: 369 EKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +  I  +   D  +   L  D      + +  G  +I +++     G ++Y+++
Sbjct: 352 GETQIYNINLADNDRLTQLT-DGMYDYASLALCGDKVI-AKRHSMSMGDEIYAVN 404


>gi|156044028|ref|XP_001588570.1| hypothetical protein SS1G_10117 [Sclerotinia sclerotiorum 1980]
 gi|154694506|gb|EDN94244.1| hypothetical protein SS1G_10117 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 1057

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 91/291 (31%), Gaps = 37/291 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K          RLWD    + +   +            H  S+ +        G     
Sbjct: 591 TKVASGSDDKTIRLWDTVTGESLQTLE-----------GH--SNWVTSVAFSPDG----- 632

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                  V SG    ++ + D                +    FSP+  KVA  + D    
Sbjct: 633 -----TKVASGSEDKTIRLWDAVTGESLQTLEGHSNWVTSVAFSPDGTKVASGSDDK--- 684

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L DT    + + +    + + +  FS +G +   S   D+ + ++   +   + + 
Sbjct: 685 -TIRLWDTVTGESLQTLEGHSNWVTSVAFSPDGTKVA-SGSDDKTIRLWDT-VTGESLQT 741

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L        S ++SPD +++   SD    + + +  +   +  +  +          +SP
Sbjct: 742 LEGHSNPVTSVAFSPDGTKVASGSD---DKTIRLWDAVTGESLQTLEGHSNWVTSVAFSP 798

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
            G  +A          I +      +    +E  +    +  +SP G  + 
Sbjct: 799 DGTKVASGSDDKT---IRLWDAVTGESLQTLEGHSDGVSSLAFSPDGTKVA 846



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 53/317 (16%), Positives = 113/317 (35%), Gaps = 35/317 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP-------ASWRKIAHTISDDIYQ---SI 166
             K          RLWD    + +   +  S+P           K+A    D   +   ++
Sbjct: 717  TKVASGSDDKTIRLWDTVTGESLQTLEGHSNPVTSVAFSPDGTKVASGSDDKTIRLWDAV 776

Query: 167  TGEK-------GDFNSRILFVSE--SVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFE 216
            TGE         ++ + + F  +   V SG    ++ + D   G +++ L    D +   
Sbjct: 777  TGESLQTLEGHSNWVTSVAFSPDGTKVASGSDDKTIRLWDAVTGESLQTLEGHSDGVSSL 836

Query: 217  PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              FSP+  KVA  ++DD     V L D     + + +      + +  FS +G +   S 
Sbjct: 837  -AFSPDGTKVASGSFDD----TVRLWDAVTGESLQTLEGHLDGVSSVAFSPDGTKVA-SG 890

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              D+ + ++ + +   + + L        S ++SPD +++   S+    + + +  +   
Sbjct: 891  SFDKTIRLWDI-VTGESLQTLEGHSNWVTSVAFSPDGTKVASGSE---DKTIRLWDAVTG 946

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--A 394
            +  +  +          +SP G  +A          I +      +    +E  +    +
Sbjct: 947  ESLQTLEGHSNWVTSVAFSPDGTKVASGSEDKT---IRLWDAVTGESLQTLEGHSNWVTS 1003

Query: 395  PTWSPSGRSLIFSRKKD 411
              +SP G  +      D
Sbjct: 1004 VAFSPDGTKVASGSDDD 1020



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 101/293 (34%), Gaps = 39/293 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
             K          RLWD    + +   +            H  SD +        G     
Sbjct: 801  TKVASGSDDKTIRLWDAVTGESLQTLE-----------GH--SDGVSSLAFSPDG----- 842

Query: 177  ILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                   V SG   +++ + D   G +++ L    D +     FSP+  KVA  ++D   
Sbjct: 843  -----TKVASGSFDDTVRLWDAVTGESLQTLEGHLDGVSSV-AFSPDGTKVASGSFDK-- 894

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
               + L D     + + +    + + +  FS +G +   S  +D+ + ++   +   + +
Sbjct: 895  --TIRLWDIVTGESLQTLEGHSNWVTSVAFSPDGTKVA-SGSEDKTIRLWDA-VTGESLQ 950

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             L        S ++SPD +++   S+    + + +  +   +  +  +          +S
Sbjct: 951  TLEGHSNWVTSVAFSPDGTKVASGSE---DKTIRLWDAVTGESLQTLEGHSNWVTSVAFS 1007

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIF 406
            P G  +A          + +      +    +E  + +  +  +SP G   I+
Sbjct: 1008 PDGTKVASGSDDDT---VRLWDAVTGELLQTLEGHSNRVTSVAFSPDGTKCIY 1057



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 72/203 (35%), Gaps = 14/203 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    FSP+  KVA  + D      + L DT    + + +    + + +  
Sbjct: 572 QTLEGHSDSVTSVAFSPDGTKVASGSDDK----TIRLWDTVTGESLQTLEGHSNWVTSVA 627

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G +   S  +D+ + ++   +   + + L        S ++SPD +++   SD   
Sbjct: 628 FSPDGTKVA-SGSEDKTIRLWDA-VTGESLQTLEGHSNWVTSVAFSPDGTKVASGSD--- 682

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +  +   +  +  +          +SP G  +A          I +      +  
Sbjct: 683 DKTIRLWDTVTGESLQTLEGHSNWVTSVAFSPDGTKVASGSDDKT---IRLWDTVTGESL 739

Query: 385 LLVEDSNL--QAPTWSPSGRSLI 405
             +E  +    +  +SP G  + 
Sbjct: 740 QTLEGHSNPVTSVAFSPDGTKVA 762



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 66/191 (34%), Gaps = 12/191 (6%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           F+P    +   +  Y    I ++    +    A + +      + +  FS +G +   S 
Sbjct: 538 FAPENSIIRKTFQEYIPSWIYKISRTRSNWSAALQTLEGHSDSVTSVAFSPDGTKVA-SG 596

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D+ + ++   +   + + L        S ++SPD +++   S+    + + +  +   
Sbjct: 597 SDDKTIRLWDT-VTGESLQTLEGHSNWVTSVAFSPDGTKVASGSE---DKTIRLWDAVTG 652

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--A 394
           +  +  +          +SP G  +A          I +      +    +E  +    +
Sbjct: 653 ESLQTLEGHSNWVTSVAFSPDGTKVASGSDDKT---IRLWDTVTGESLQTLEGHSNWVTS 709

Query: 395 PTWSPSGRSLI 405
             +SP G  + 
Sbjct: 710 VAFSPDGTKVA 720


>gi|239990874|ref|ZP_04711538.1| hypothetical protein SrosN1_26444 [Streptomyces roseosporus NRRL
           11379]
          Length = 842

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 16/160 (10%)

Query: 298 TNTLFINISASYSPD----SSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ LF +  A Y  D       +VF S R+  K Q+Y+  ++GS  +R++  ++A+   P
Sbjct: 75  TDPLFGDGPAHYDQDPSARGDVLVFTSLRDSAKPQVYIRGADGS-VRRLTDGRDAAR--P 131

Query: 353 VWSPQGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIF 406
             SP G  + F           +  +  +  DGS  R L + + N ++PTWSP G  + +
Sbjct: 132 ELSPDGRTVVFDSAEPGPGGTVQRDLWSVGVDGSNLRRLTDTADNEESPTWSPDGTRIAY 191

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           +   D   G ++Y  D+ G  +T I+      A++P W  
Sbjct: 192 ACDGDAVLGWQIYVRDVAGGPQTRISDAGGGDATEPSWNP 231



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 90/252 (35%), Gaps = 29/252 (11%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++R   +  + +    K  + +   DG+ +R LT  RD     P  SP+ + V + + + 
Sbjct: 91  SARGDVLVFTSLRDSAKPQVYIRGADGS-VRRLTDGRD--AARPELSPDGRTVVFDSAEP 147

Query: 234 EDILRVYLMDTRIDRAP---KRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVD 288
                V      +       +R+ +      +P +S +G R   +   D      IY  D
Sbjct: 148 GPGGTVQRDLWSVGVDGSNLRRLTDTADNEESPTWSPDGTRIAYACDGDAVLGWQIYVRD 207

Query: 289 LQSNATERLTNTLFIN-ISASYSP-----DSSQIVFES------DREGKEQLYVMQSNGS 336
           +      R+++    +    S++P     D + + +        D +   +L   +  G+
Sbjct: 208 VAGGPQTRISDAGGGDATEPSWNPGADPADRNTVAYTLTTNPDPDVDDGTELRATEGLGT 267

Query: 337 DQKRISQDK-EASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQE--RLLV 387
           D+  ++    E       W P G  + F                 V   DG+    +L+ 
Sbjct: 268 DRPLLAGGHAEWGTRSASWLPDGKDVVFLSPYHTCGCDDFDHVYRVTAFDGTNPPDQLVN 327

Query: 388 EDSNLQAPTWSP 399
           E+  +  PTW P
Sbjct: 328 ENRQVGPPTWFP 339



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 88/241 (36%), Gaps = 28/241 (11%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++A+A  +   + R    DT          ++         S+ G   + +  +D A   
Sbjct: 55  RIAFAGSEHRSLGRANDQDTTDPLFGDGPAHYDQDP-----SARGDVLVFTSLRDSAKPQ 109

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQK 339
             +     +  RLT+          SPD   +VF+S   G     +  L+ +  +GS+ +
Sbjct: 110 VYIRGADGSVRRLTDGRDA-ARPELSPDGRTVVFDSAEPGPGGTVQRDLWSVGVDGSNLR 168

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVE--DSNLQAP 395
           R++ D   +   P WSP G  IA+         + I V    G  +  + +    +   P
Sbjct: 169 RLT-DTADNEESPTWSPDGTRIAYACDGDAVLGWQIYVRDVAGGPQTRISDAGGGDATEP 227

Query: 396 TWSP-----SGRSLIFSRKKDGDT----GSKLYSIDLNGRNETLINTPA---YASDPQWV 443
           +W+P        ++ ++   + D     G++L + +  G +  L+             W+
Sbjct: 228 SWNPGADPADRNTVAYTLTTNPDPDVDDGTELRATEGLGTDRPLLAGGHAEWGTRSASWL 287

Query: 444 G 444
            
Sbjct: 288 P 288



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 55/349 (15%), Positives = 116/349 (33%), Gaps = 80/349 (22%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY- 228
             D  + +   +E    G ++  L  +  DG+N+R LT + D     P +SP+  ++AY 
Sbjct: 134 SPDGRTVVFDSAEPGPGGTVQRDLWSVGVDGSNLRRLTDTADN-EESPTWSPDGTRIAYA 192

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMD 283
              D     ++Y+ D       +           P ++      +      ++  +    
Sbjct: 193 CDGDAVLGWQIYVRDVAGGPQTRISDAGGGDATEPSWNPGADPADRNTVAYTLTTNPDP- 251

Query: 284 IYSVDLQSNATERLTNTLFIN-------------ISASYSPDSSQIVFESDR-----EGK 325
               D+      R T  L  +              SAS+ PD   +VF S       +  
Sbjct: 252 ----DVDDGTELRATEGLGTDRPLLAGGHAEWGTRSASWLPDGKDVVFLSPYHTCGCDDF 307

Query: 326 EQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------------- 370
           + +Y + + +G++      ++      P W P    +   + + +               
Sbjct: 308 DHVYRVTAFDGTNPPDQLVNENRQVGPPTWFPPAGTVVVPRITPDPETVKKPDELLAAAQ 367

Query: 371 -FAIGVMKKDGSQERLLVEDSNLQAP---------------------------TWSPSGR 402
              +  +++DGS  R L      + P                           +++P GR
Sbjct: 368 IVTLQDVRQDGSDPRDLGLTILKEDPAARTNENPAVDPLFSPAAGFDPWTERQSYTPDGR 427

Query: 403 SLIFSRKKDGDTGS--KLYSIDLNGRNETLINTPA-----YASDPQWVG 444
            ++ +R +D D G   +++  D +G N   +         + +DP +  
Sbjct: 428 RIVVTRFEDTDAGRVERIWMADADGGNAAALPLAGRGPNDWDTDPAFSP 476



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 93/292 (31%), Gaps = 59/292 (20%)

Query: 209 SRDQILFEPRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMI---LA 262
             D       ++P+ +++    +   D   + R+++ D     A       R        
Sbjct: 412 GFDPWTERQSYTPDGRRIVVTRFEDTDAGRVERIWMADADGGNAAALPLAGRGPNDWDTD 471

Query: 263 PRFSSNGKRALISVQKDEAM-------DIYSVDLQSNA---TERLTNT--LFINISASYS 310
           P FS +G +   +               I   D+ S       R         +   ++S
Sbjct: 472 PAFSPDGTKLAFTRTSPGGTGDAAGPSRILVADVASGEILDEIRPPEGQQTGGDAQPTWS 531

Query: 311 PDSSQIVFESDR-----EGKEQLYVMQ-SNGSDQKRIS-----QDKEASYFDPVWSPQGD 359
            D   + F  +       G + ++V+  ++  +Q+ +S      D +     P +SP G 
Sbjct: 532 SDGVNLAFTRNHVINGDGGNKHIWVVPVADLGNQRDLSATICPGDCDVIDDSPAFSPDGL 591

Query: 360 LIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAP------------------- 395
            +AF +  G         + +    G   R+++       P                   
Sbjct: 592 KVAFNRKDGGGRVNQQAGVLIKPLRGGGCRVVLPSVQKDNPDGCDLPVPDATATGPHQPR 651

Query: 396 --TWSPSGRSLIFSRKKDGDTGS--KLYSIDLNGRNETLINT--PAYASDPQ 441
              W+P G  L+F+ +++    S  +L  +D+     T ++        +P 
Sbjct: 652 DVAWTPGGDKLVFTARRELAPNSMEQLSVLDIASGELTPVDNTHAGRQKEPA 703



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 60/381 (15%), Positives = 113/381 (29%), Gaps = 90/381 (23%)

Query: 119 EGKDRLRVEFRLW-----DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           +  DR  V + L      DV D  ++   +   +        H  ++   +S +      
Sbjct: 234 DPADRNTVAYTLTTNPDPDVDDGTELRATEGLGTDRPLLAGGH--AEWGTRSASWLPDGK 291

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +   L    +       +   V   DG N      + ++ +  P + P    V       
Sbjct: 292 DVVFLSPYHTCGCDDFDHVYRVTAFDGTNPPDQLVNENRQVGPPTWFPPAGTVVVPRITP 351

Query: 234 ED------------ILRVYLMDTRIDR-APKRIG-----------NFRSMILAPRFSS-- 267
           +                V L D R D   P+ +G              +  + P FS   
Sbjct: 352 DPETVKKPDELLAAAQIVTLQDVRQDGSDPRDLGLTILKEDPAARTNENPAVDPLFSPAA 411

Query: 268 -------------NGKRALISVQKD---EAMDIYSV-----------DLQSNATERLTNT 300
                        +G+R +++  +D     ++   +            L           
Sbjct: 412 GFDPWTERQSYTPDGRRIVVTRFEDTDAGRVERIWMADADGGNAAALPLAGRGP------ 465

Query: 301 LFINISASYSPDSSQIVFES-------DREGKEQLYVMQSNGS----DQKRISQDKEASY 349
              +   ++SPD +++ F         D  G  ++ V          + +     +    
Sbjct: 466 NDWDTDPAFSPDGTKLAFTRTSPGGTGDAAGPSRILVADVASGEILDEIRPPEGQQTGGD 525

Query: 350 FDPVWSPQGDLIAFTKF-----SGEKFAIGVMK-KDGSQERLLVE-------DSNLQAPT 396
             P WS  G  +AFT+       G    I V+   D   +R L         D    +P 
Sbjct: 526 AQPTWSSDGVNLAFTRNHVINGDGGNKHIWVVPVADLGNQRDLSATICPGDCDVIDDSPA 585

Query: 397 WSPSGRSLIFSRKKDGDTGSK 417
           +SP G  + F+RK  G   ++
Sbjct: 586 FSPDGLKVAFNRKDGGGRVNQ 606


>gi|239944417|ref|ZP_04696354.1| hypothetical protein SrosN15_25687 [Streptomyces roseosporus NRRL
           15998]
          Length = 835

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 16/160 (10%)

Query: 298 TNTLFINISASYSPD----SSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ LF +  A Y  D       +VF S R+  K Q+Y+  ++GS  +R++  ++A+   P
Sbjct: 75  TDPLFGDGPAHYDQDPSARGDVLVFTSLRDSAKPQVYIRGADGS-VRRLTDGRDAAR--P 131

Query: 353 VWSPQGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIF 406
             SP G  + F           +  +  +  DGS  R L + + N ++PTWSP G  + +
Sbjct: 132 ELSPDGRTVVFDSAEPGPGGTVQRDLWSVGVDGSNLRRLTDTADNEESPTWSPDGTRIAY 191

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           +   D   G ++Y  D+ G  +T I+      A++P W  
Sbjct: 192 ACDGDAVLGWQIYVRDVAGGPQTRISDAGGGDATEPSWNP 231



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 90/252 (35%), Gaps = 29/252 (11%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++R   +  + +    K  + +   DG+ +R LT  RD     P  SP+ + V + + + 
Sbjct: 91  SARGDVLVFTSLRDSAKPQVYIRGADGS-VRRLTDGRD--AARPELSPDGRTVVFDSAEP 147

Query: 234 EDILRVYLMDTRIDRAP---KRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVD 288
                V      +       +R+ +      +P +S +G R   +   D      IY  D
Sbjct: 148 GPGGTVQRDLWSVGVDGSNLRRLTDTADNEESPTWSPDGTRIAYACDGDAVLGWQIYVRD 207

Query: 289 LQSNATERLTNTLFIN-ISASYSP-----DSSQIVFES------DREGKEQLYVMQSNGS 336
           +      R+++    +    S++P     D + + +        D +   +L   +  G+
Sbjct: 208 VAGGPQTRISDAGGGDATEPSWNPGADPADRNTVAYTLTTNPDPDVDDGTELRATEGLGT 267

Query: 337 DQKRISQDK-EASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQE--RLLV 387
           D+  ++    E       W P G  + F                 V   DG+    +L+ 
Sbjct: 268 DRPLLAGGHAEWGTRSASWLPDGKDVVFLSPYHTCGCDDFDHVYRVTAFDGTNPPDQLVN 327

Query: 388 EDSNLQAPTWSP 399
           E+  +  PTW P
Sbjct: 328 ENRQVGPPTWFP 339



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 88/241 (36%), Gaps = 28/241 (11%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++A+A  +   + R    DT          ++         S+ G   + +  +D A   
Sbjct: 55  RIAFAGSEHRSLGRANDQDTTDPLFGDGPAHYDQDP-----SARGDVLVFTSLRDSAKPQ 109

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQK 339
             +     +  RLT+          SPD   +VF+S   G     +  L+ +  +GS+ +
Sbjct: 110 VYIRGADGSVRRLTDGRDA-ARPELSPDGRTVVFDSAEPGPGGTVQRDLWSVGVDGSNLR 168

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVE--DSNLQAP 395
           R++ D   +   P WSP G  IA+         + I V    G  +  + +    +   P
Sbjct: 169 RLT-DTADNEESPTWSPDGTRIAYACDGDAVLGWQIYVRDVAGGPQTRISDAGGGDATEP 227

Query: 396 TWSP-----SGRSLIFSRKKDGDT----GSKLYSIDLNGRNETLINTPA---YASDPQWV 443
           +W+P        ++ ++   + D     G++L + +  G +  L+             W+
Sbjct: 228 SWNPGADPADRNTVAYTLTTNPDPDVDDGTELRATEGLGTDRPLLAGGHAEWGTRSASWL 287

Query: 444 G 444
            
Sbjct: 288 P 288



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 55/349 (15%), Positives = 116/349 (33%), Gaps = 80/349 (22%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY- 228
             D  + +   +E    G ++  L  +  DG+N+R LT + D     P +SP+  ++AY 
Sbjct: 134 SPDGRTVVFDSAEPGPGGTVQRDLWSVGVDGSNLRRLTDTADN-EESPTWSPDGTRIAYA 192

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMD 283
              D     ++Y+ D       +           P ++      +      ++  +    
Sbjct: 193 CDGDAVLGWQIYVRDVAGGPQTRISDAGGGDATEPSWNPGADPADRNTVAYTLTTNPDP- 251

Query: 284 IYSVDLQSNATERLTNTLFIN-------------ISASYSPDSSQIVFESDR-----EGK 325
               D+      R T  L  +              SAS+ PD   +VF S       +  
Sbjct: 252 ----DVDDGTELRATEGLGTDRPLLAGGHAEWGTRSASWLPDGKDVVFLSPYHTCGCDDF 307

Query: 326 EQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------------- 370
           + +Y + + +G++      ++      P W P    +   + + +               
Sbjct: 308 DHVYRVTAFDGTNPPDQLVNENRQVGPPTWFPPAGTVVVPRITPDPETVKKPDELLAAAQ 367

Query: 371 -FAIGVMKKDGSQERLLVEDSNLQAP---------------------------TWSPSGR 402
              +  +++DGS  R L      + P                           +++P GR
Sbjct: 368 IVTLQDVRQDGSDPRDLGLTILKEDPAARTNENPAVDPLFSPAAGFDPWTERQSYTPDGR 427

Query: 403 SLIFSRKKDGDTGS--KLYSIDLNGRNETLINTPA-----YASDPQWVG 444
            ++ +R +D D G   +++  D +G N   +         + +DP +  
Sbjct: 428 RIVVTRFEDTDAGRVERIWMADADGGNAAALPLAGRGPNDWDTDPAFSP 476



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 93/292 (31%), Gaps = 59/292 (20%)

Query: 209 SRDQILFEPRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMI---LA 262
             D       ++P+ +++    +   D   + R+++ D     A       R        
Sbjct: 412 GFDPWTERQSYTPDGRRIVVTRFEDTDAGRVERIWMADADGGNAAALPLAGRGPNDWDTD 471

Query: 263 PRFSSNGKRALISVQKDEAM-------DIYSVDLQSNA---TERLTNT--LFINISASYS 310
           P FS +G +   +               I   D+ S       R         +   ++S
Sbjct: 472 PAFSPDGTKLAFTRTSPGGTGDAAGPSRILVADVASGEILDEIRPPEGQQTGGDAQPTWS 531

Query: 311 PDSSQIVFESDR-----EGKEQLYVMQ-SNGSDQKRIS-----QDKEASYFDPVWSPQGD 359
            D   + F  +       G + ++V+  ++  +Q+ +S      D +     P +SP G 
Sbjct: 532 SDGVNLAFTRNHVINGDGGNKHIWVVPVADLGNQRDLSATICPGDCDVIDDSPAFSPDGL 591

Query: 360 LIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAP------------------- 395
            +AF +  G         + +    G   R+++       P                   
Sbjct: 592 KVAFNRKDGGGRVNQQAGVLIKPLRGGGCRVVLPSVQKDNPDGCDLPVPDATATGPHQPR 651

Query: 396 --TWSPSGRSLIFSRKKDGDTGS--KLYSIDLNGRNETLINT--PAYASDPQ 441
              W+P G  L+F+ +++    S  +L  +D+     T ++        +P 
Sbjct: 652 DVAWTPGGDKLVFTARRELAPNSMEQLSVLDIASGELTPVDNTHAGRQKEPA 703



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 60/381 (15%), Positives = 113/381 (29%), Gaps = 90/381 (23%)

Query: 119 EGKDRLRVEFRLW-----DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           +  DR  V + L      DV D  ++   +   +        H  ++   +S +      
Sbjct: 234 DPADRNTVAYTLTTNPDPDVDDGTELRATEGLGTDRPLLAGGH--AEWGTRSASWLPDGK 291

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +   L    +       +   V   DG N      + ++ +  P + P    V       
Sbjct: 292 DVVFLSPYHTCGCDDFDHVYRVTAFDGTNPPDQLVNENRQVGPPTWFPPAGTVVVPRITP 351

Query: 234 ED------------ILRVYLMDTRIDR-APKRIG-----------NFRSMILAPRFSS-- 267
           +                V L D R D   P+ +G              +  + P FS   
Sbjct: 352 DPETVKKPDELLAAAQIVTLQDVRQDGSDPRDLGLTILKEDPAARTNENPAVDPLFSPAA 411

Query: 268 -------------NGKRALISVQKD---EAMDIYSV-----------DLQSNATERLTNT 300
                        +G+R +++  +D     ++   +            L           
Sbjct: 412 GFDPWTERQSYTPDGRRIVVTRFEDTDAGRVERIWMADADGGNAAALPLAGRGP------ 465

Query: 301 LFINISASYSPDSSQIVFES-------DREGKEQLYVMQSNGS----DQKRISQDKEASY 349
              +   ++SPD +++ F         D  G  ++ V          + +     +    
Sbjct: 466 NDWDTDPAFSPDGTKLAFTRTSPGGTGDAAGPSRILVADVASGEILDEIRPPEGQQTGGD 525

Query: 350 FDPVWSPQGDLIAFTKF-----SGEKFAIGVMK-KDGSQERLLVE-------DSNLQAPT 396
             P WS  G  +AFT+       G    I V+   D   +R L         D    +P 
Sbjct: 526 AQPTWSSDGVNLAFTRNHVINGDGGNKHIWVVPVADLGNQRDLSATICPGDCDVIDDSPA 585

Query: 397 WSPSGRSLIFSRKKDGDTGSK 417
           +SP G  + F+RK  G   ++
Sbjct: 586 FSPDGLKVAFNRKDGGGRVNQ 606


>gi|307152491|ref|YP_003887875.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306982719|gb|ADN14600.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 1270

 Score = 99.7 bits (247), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 58/311 (18%), Positives = 111/311 (35%), Gaps = 46/311 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+++  G     +  +LWDV+  + I                H   D ++       G  
Sbjct: 958  GKILASGSGDKTI--KLWDVQTGQLIRTLS-----------GHN--DVVWSVSFSPDGKI 1002

Query: 174  NSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                        SG    ++ + D + G  IR L+   D + +   FSP+ + +A  + D
Sbjct: 1003 L----------ASGSGDKTIKLWDVQTGQQIRTLSRHNDSV-WSVSFSPDGKILASGSGD 1051

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                  + L D +  +  + +      +L+  FS +GK  L S  +D+ + ++  D+Q+ 
Sbjct: 1052 K----TIKLWDVQTGQQIRTLSRHNDSVLSVSFSGDGK-ILASGSRDKTIKLW--DVQTG 1104

Query: 293  ATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               R L+      +S S+S D   +   S       + +         R           
Sbjct: 1105 QQIRTLSRHNDSVLSVSFSGDGKILASGSR---DTSIKLWDVQTGQLIRTLSGHNEYVRS 1161

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRK 409
              +SP G ++A          I +      Q+   +   N    + ++SP G+ L    +
Sbjct: 1162 VSFSPDGKILASGSRDTS---IKLWDVQTGQQIRTLSGHNDVVWSVSFSPDGKILASGSR 1218

Query: 410  KDGDTGSKLYS 420
               DT  KL+ 
Sbjct: 1219 ---DTSIKLWD 1226



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 58/337 (17%), Positives = 112/337 (33%), Gaps = 52/337 (15%)

Query: 116  VIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            V K G   +          +LWDV+  + I                H   D +       
Sbjct: 910  VTKGGAGGILASGSRDTSIKLWDVQTGQLIRTLS-----------GHN--DGVSSVSFSP 956

Query: 170  KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
             G              SG    ++ + D     +       + +++   FSP+ + +A  
Sbjct: 957  DGKIL----------ASGSGDKTIKLWDVQTGQLIRTLSGHNDVVWSVSFSPDGKILASG 1006

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            + D      + L D +  +  + +      + +  FS +GK  L S   D+ + ++  D+
Sbjct: 1007 SGDK----TIKLWDVQTGQQIRTLSRHNDSVWSVSFSPDGK-ILASGSGDKTIKLW--DV 1059

Query: 290  QSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            Q+    R L+      +S S+S D   +   S     + + +       Q R       S
Sbjct: 1060 QTGQQIRTLSRHNDSVLSVSFSGDGKILASGSR---DKTIKLWDVQTGQQIRTLSRHNDS 1116

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIF 406
                 +S  G ++A          I +      Q    +   N  +++ ++SP G+ L  
Sbjct: 1117 VLSVSFSGDGKILASGSRDTS---IKLWDVQTGQLIRTLSGHNEYVRSVSFSPDGKILAS 1173

Query: 407  SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              +   DT  KL+ +         I T +  +D  W 
Sbjct: 1174 GSR---DTSIKLWDVQTG----QQIRTLSGHNDVVWS 1203



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 89/234 (38%), Gaps = 21/234 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           AN        +  +    FSP+ + +A  ++D      + L D +  +  + +      +
Sbjct: 632 ANEYNRLERHNDSVTSVSFSPDGKILASGSWDK----TIKLWDVQTGQEIRTLSGHNDSV 687

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFE 319
            +  FS +GK  L S  +D+ + ++  D+Q+      L+       S S+SPD   +   
Sbjct: 688 YSVSFSGDGK-ILASGSRDKTIKLW--DVQTGKEISTLSGHNDSVYSVSFSPDGKILASG 744

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKK 378
           S   G + + +       + R       S +   +SP G ++A    SG  +  I +   
Sbjct: 745 S---GDKTIKLWDVQTGQEIRTLSGHNDSVYSVSFSPDGKILA----SGSGYKTIKLWDV 797

Query: 379 DGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
              QE   +   N    + ++S  G+ L    +   D   KL+ +       TL
Sbjct: 798 QTGQEIRTLSGHNDSVLSVSFSGDGKILASGSR---DKTIKLWDVQTGQEIRTL 848



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 88/296 (29%), Gaps = 45/296 (15%)

Query: 113 TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
              V      ++          +LWDV+  ++I                H   D +Y   
Sbjct: 645 VTSVSFSPDGKILASGSWDKTIKLWDVQTGQEIRTLS-----------GHN--DSVYSVS 691

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
               G              SG    ++ + D             +  ++   FSP+ + +
Sbjct: 692 FSGDGKIL----------ASGSRDKTIKLWDVQTGKEISTLSGHNDSVYSVSFSPDGKIL 741

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A  + D      + L D +  +  + +      + +  FS +GK             I  
Sbjct: 742 ASGSGDK----TIKLWDVQTGQEIRTLSGHNDSVYSVSFSPDGKILA---SGSGYKTIKL 794

Query: 287 VDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            D+Q+    R L+      +S S+S D   +   S     + + +       + R     
Sbjct: 795 WDVQTGQEIRTLSGHNDSVLSVSFSGDGKILASGSR---DKTIKLWDVQTGQEIRTLSGH 851

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSP 399
             S     +S  G ++A   +      I +      Q    +   N    + ++SP
Sbjct: 852 NDSVLSVSFSGDGKILASGSWDKT---IKLWDVQTGQLIRTLSGHNDGVSSVSFSP 904


>gi|315127820|ref|YP_004069823.1| TolB domain protein [Pseudoalteromonas sp. SM9913]
 gi|315016334|gb|ADT69672.1| TolB domain protein [Pseudoalteromonas sp. SM9913]
          Length = 691

 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 45/325 (13%), Positives = 102/325 (31%), Gaps = 51/325 (15%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +  F+  + F+            +   +    N   +     +   +   +    K+ Y 
Sbjct: 209 RAVFSPDLTFIYYYRRIAAQGCEVIQQNIASGNTTVIGLCGSKTSTDIDINATGTKLVYI 268

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL------APRFSSNGKRALISVQ-KDEAM 282
           + D+++     L    +  +P  +              +  FS +  + ++S        
Sbjct: 269 SEDEKNNNLTQLNIVDLTSSPYTVTQVPCTSACQYTDESVVFSPDATQLVVSRNLPTGFE 328

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY------------- 329
           +++ +D+++   ++LT+         + P+  Q+VF   ++GK Q Y             
Sbjct: 329 ELFLIDIKTAHAKQLTSGFVDMRGVDWHPNKPQLVFSGVKKGKRQGYFYNLKTQQMINAH 388

Query: 330 ------------------VMQSNGSDQKRISQDKEASYFDPVWSPQ-----------GDL 360
                                 + +  +  + +  AS   PV S                
Sbjct: 389 IDGLSYPEYAHDGSLYFHQWNIDSTLMRVETSNAVASSPFPVLSSDFNTRFPDYSKARKK 448

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           + F         +    +DG+  + L    +N+  P WSP G  + F     G+    LY
Sbjct: 449 LVFVSNESGSMELWTANQDGTSRKQLTNLSANIYNPVWSPDGNYIAFVASHLGEHALYLY 508

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
             +    +++L    +Y   P W  
Sbjct: 509 DFNTQ-SSQSLPTGFSYHGKPSWAA 532



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 92/250 (36%), Gaps = 17/250 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG+ K        +    + +    D  L  P ++ +   + +  ++ +  L      
Sbjct: 363 VFSGVKKGKRQGYFYNLKTQQMINAHIDG-LSYPEYAHDGS-LYFHQWNIDSTLMRVETS 420

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
             +  +P  + +       P +S   K+ +    +  +M++++ +    + ++LTN    
Sbjct: 421 NAVASSPFPVLSSDFNTRFPDYSKARKKLVFVSNESGSMELWTANQDGTSRKQLTNLSAN 480

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +  +SPD + I F +   G+  LY+   N    + +     + +  P W+     +  
Sbjct: 481 IYNPVWSPDGNYIAFVASHLGEHALYLYDFNTQSSQSL-PTGFSYHGKPSWAADSKSLLV 539

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSI 421
                    +     +G++    ++   L    ++   +   LIF+        ++L+  
Sbjct: 540 ANDQ----YVYRFDLNGNKLAQAIDSPTL----YAYENKQGALIFA----NQATNQLWIK 587

Query: 422 DLNGRNETLI 431
           D N + E  +
Sbjct: 588 DPNSQTEQPL 597



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 94/259 (36%), Gaps = 31/259 (11%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPR 264
              +       P  S +   +AY+         +YL D  + ++A   + +   +     
Sbjct: 152 TITTSPGRELFPAISNDSHFLAYSWRRPGHKANLYLRDLHLPEQAAIALTDTPFIEGRAV 211

Query: 265 FSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLT-----NTLFINISASYSPDSSQIVF 318
           FS +        +   +  ++   ++ S  T  +       +  I+I+A+     +++V+
Sbjct: 212 FSPDLTFIYYYRRIAAQGCEVIQQNIASGNTTVIGLCGSKTSTDIDINAT----GTKLVY 267

Query: 319 ESDREGKE---QLYVMQSNGSD--QKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            S+ E      QL ++    S     ++  +   + +    V+SP    +  ++     F
Sbjct: 268 ISEDEKNNNLTQLNIVDLTSSPYTVTQVPCTSACQYTDESVVFSPDATQLVVSRNLPTGF 327

Query: 372 -AIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             + ++    +  + L     +++   W P+   L+FS  K G      Y++    + + 
Sbjct: 328 EELFLIDIKTAHAKQLTSGFVDMRGVDWHPNKPQLVFSGVKKGKRQGYFYNL----KTQQ 383

Query: 430 LINT-------PAYASDPQ 441
           +IN        P YA D  
Sbjct: 384 MINAHIDGLSYPEYAHDGS 402


>gi|299149075|ref|ZP_07042137.1| MdsD protein [Bacteroides sp. 3_1_23]
 gi|298513836|gb|EFI37723.1| MdsD protein [Bacteroides sp. 3_1_23]
          Length = 1094

 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 67/203 (33%), Gaps = 29/203 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    IY+V        ++T     +    +SPDS QI F SDR 
Sbjct: 30  ALSPDGTTIAFTYKGD----IYTVPSTGGRATQITTNPAFDTEPVWSPDSKQIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFA 372
           G   ++V+ S G   +R++    +    PV       I FT             SG+   
Sbjct: 86  GSLDVFVVSSEGGAPQRLTTHSGSE--KPVAYKDNKHILFTANIAPSAEDAGFPSGQFQQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---------IFSRKKDGDTGSKLYSIDL 423
           +  +   G +  +      ++  + +  G  L          + + +       +++   
Sbjct: 144 VYEVAVTGGRPAMFSSMP-MECISINKEGVMLYQDKKGYEDYWRKHQVSPIARDIWTYTP 202

Query: 424 NGRN--ETLINTPAYASDPQWVG 444
             +   +          +P W  
Sbjct: 203 GKKPVYQKQTTFGGEDREPVWSP 225



 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 56/303 (18%), Positives = 112/303 (36%), Gaps = 42/303 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ EKG FN   +F      +   + +          +R+L+ S    L    +  +
Sbjct: 230 FYYLSEEKGSFN---IFQRTPGTTTSQQITFHTKHP----VRFLSISTTGTLC---YGYD 279

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +            + + ++  + D+   R             S  GK     ++ D   
Sbjct: 280 GEIYTLTPGKQPQKVNISILADKNDKDIIRQIKSNGATDI-AVSPKGKEVAFIMRGD--- 335

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   +    T+++TNT     + S++PD   +V+ S+R+G  QLY       ++K+ +
Sbjct: 336 -VYVTSIDYKTTKQITNTPDQERNISFAPDGRTLVYSSERDGLWQLYTSTIVRKEEKQFT 394

Query: 343 QDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---- 388
              E           + F P +SP G  +AF +      AI V+       R +++    
Sbjct: 395 YATELKEERLTNSKVASFQPQFSPDGKEVAFLENRT---AIRVINLKNKAVRTVMDAKYQ 451

Query: 389 ----DSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNE--TLINTPAYASDP 440
               D +     WSP  + ++  F     G     +  +  +G+ E   L  +    S+ 
Sbjct: 452 YSYADGDQWF-QWSPDSQWILSDFI-GIGGWNNKDVVLLKADGKGEMVNLTESGYSDSNA 509

Query: 441 QWV 443
           +WV
Sbjct: 510 KWV 512



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 72/229 (31%), Gaps = 48/229 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V            +I    +    P +S + K+   +  
Sbjct: 30  ALSPDGTTIAFTY--KGDIYTV----PSTGGRATQITTNPAFDTEPVWSPDSKQIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------REGK-E 326
           +  ++D++ V  +  A +RLT             D+  I+F ++            G+ +
Sbjct: 84  RMGSLDVFVVSSEGGAPQRLTTHSGSE-KPVAYKDNKHILFTANIAPSAEDAGFPSGQFQ 142

Query: 327 QLYVMQSNGSDQKRIS--------------------QDKEASYFDPVWSPQGDLIAFTKF 366
           Q+Y +   G      S                    +  E  +     SP    I    +
Sbjct: 143 QVYEVAVTGGRPAMFSSMPMECISINKEGVMLYQDKKGYEDYWRKHQVSPIARDIW--TY 200

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +  K  +         ++        + P WSP G+S  +  ++ G   
Sbjct: 201 TPGKKPVY--------QKQTTFGGEDREPVWSPDGKSFYYLSEEKGSFN 241



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 86/231 (37%), Gaps = 21/231 (9%)

Query: 222 NQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              +  +  +    I R ++          ++   F      P +S +GK      ++  
Sbjct: 179 KGYEDYWRKHQVSPIARDIWTYTPGKKPVYQKQTTFGGEDREPVWSPDGKSFYYLSEEKG 238

Query: 281 AMDIYSVDLQSNATERLTNT-------LFINISAS--YSPDSSQIVFESDREGKEQLYVM 331
           + +I+     +  ++++T         L I+ + +  Y  D    ++      + Q   +
Sbjct: 239 SFNIFQRTPGTTTSQQITFHTKHPVRFLSISTTGTLCYGYDGE--IYTLTPGKQPQKVNI 296

Query: 332 Q--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              ++ +D+  I Q K     D   SP+G  +AF         + V   D    + +   
Sbjct: 297 SILADKNDKDIIRQIKSNGATDIAVSPKGKEVAFIMRGD----VYVTSIDYKTTKQITNT 352

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            + +   +++P GR+L++S ++DG    +LY+  +  + E          +
Sbjct: 353 PDQERNISFAPDGRTLVYSSERDGLW--QLYTSTIVRKEEKQFTYATELKE 401



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 7/101 (6%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSP 399
           I+Q+          SP G  IAFT        I  +   G +  ++    +    P WSP
Sbjct: 18  IAQESPLWMRHCALSPDGTTIAFTYKGD----IYTVPSTGGRATQITTNPAFDTEPVWSP 73

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             + + F+  + G     ++ +   G     + T + +  P
Sbjct: 74  DSKQIAFASDRMGS--LDVFVVSSEGGAPQRLTTHSGSEKP 112



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 45/123 (36%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             +     F+P+FSP+ ++VA+        ++ +     R     K   ++       ++
Sbjct: 404 LTNSKVASFQPQFSPDGKEVAFLENRTAIRVINLKNKAVRTVMDAKYQYSYADGDQWFQW 463

Query: 266 SSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + +  L            D+  +          LT + + + +A +      +++ SD
Sbjct: 464 SPDSQWILSDFIGIGGWNNKDVVLLKADGKGEMVNLTESGYSDSNAKWVLGGKAMIWNSD 523

Query: 322 REG 324
           R G
Sbjct: 524 RAG 526


>gi|291447884|ref|ZP_06587274.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291350831|gb|EFE77735.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 839

 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 16/160 (10%)

Query: 298 TNTLFINISASYSPD----SSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T+ LF +  A Y  D       +VF S R+  K Q+Y+  ++GS  +R++  ++A+   P
Sbjct: 79  TDPLFGDGPAHYDQDPSARGDVLVFTSLRDSAKPQVYIRGADGS-VRRLTDGRDAAR--P 135

Query: 353 VWSPQGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIF 406
             SP G  + F           +  +  +  DGS  R L + + N ++PTWSP G  + +
Sbjct: 136 ELSPDGRTVVFDSAEPGPGGTVQRDLWSVGVDGSNLRRLTDTADNEESPTWSPDGTRIAY 195

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           +   D   G ++Y  D+ G  +T I+      A++P W  
Sbjct: 196 ACDGDAVLGWQIYVRDVAGGPQTRISDAGGGDATEPSWNP 235



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 90/252 (35%), Gaps = 29/252 (11%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++R   +  + +    K  + +   DG+ +R LT  RD     P  SP+ + V + + + 
Sbjct: 95  SARGDVLVFTSLRDSAKPQVYIRGADGS-VRRLTDGRD--AARPELSPDGRTVVFDSAEP 151

Query: 234 EDILRVYLMDTRIDRAP---KRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVD 288
                V      +       +R+ +      +P +S +G R   +   D      IY  D
Sbjct: 152 GPGGTVQRDLWSVGVDGSNLRRLTDTADNEESPTWSPDGTRIAYACDGDAVLGWQIYVRD 211

Query: 289 LQSNATERLTNTLFIN-ISASYSP-----DSSQIVFES------DREGKEQLYVMQSNGS 336
           +      R+++    +    S++P     D + + +        D +   +L   +  G+
Sbjct: 212 VAGGPQTRISDAGGGDATEPSWNPGADPADRNTVAYTLTTNPDPDVDDGTELRATEGLGT 271

Query: 337 DQKRISQDK-EASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQE--RLLV 387
           D+  ++    E       W P G  + F                 V   DG+    +L+ 
Sbjct: 272 DRPLLAGGHAEWGTRSASWLPDGKDVVFLSPYHTCGCDDFDHVYRVTAFDGTNPPDQLVN 331

Query: 388 EDSNLQAPTWSP 399
           E+  +  PTW P
Sbjct: 332 ENRQVGPPTWFP 343



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 88/241 (36%), Gaps = 28/241 (11%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++A+A  +   + R    DT          ++         S+ G   + +  +D A   
Sbjct: 59  RIAFAGSEHRSLGRANDQDTTDPLFGDGPAHYDQDP-----SARGDVLVFTSLRDSAKPQ 113

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQK 339
             +     +  RLT+          SPD   +VF+S   G     +  L+ +  +GS+ +
Sbjct: 114 VYIRGADGSVRRLTDGRDA-ARPELSPDGRTVVFDSAEPGPGGTVQRDLWSVGVDGSNLR 172

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVE--DSNLQAP 395
           R++ D   +   P WSP G  IA+         + I V    G  +  + +    +   P
Sbjct: 173 RLT-DTADNEESPTWSPDGTRIAYACDGDAVLGWQIYVRDVAGGPQTRISDAGGGDATEP 231

Query: 396 TWSP-----SGRSLIFSRKKDGDT----GSKLYSIDLNGRNETLINTPA---YASDPQWV 443
           +W+P        ++ ++   + D     G++L + +  G +  L+             W+
Sbjct: 232 SWNPGADPADRNTVAYTLTTNPDPDVDDGTELRATEGLGTDRPLLAGGHAEWGTRSASWL 291

Query: 444 G 444
            
Sbjct: 292 P 292



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 55/349 (15%), Positives = 116/349 (33%), Gaps = 80/349 (22%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY- 228
             D  + +   +E    G ++  L  +  DG+N+R LT + D     P +SP+  ++AY 
Sbjct: 138 SPDGRTVVFDSAEPGPGGTVQRDLWSVGVDGSNLRRLTDTADN-EESPTWSPDGTRIAYA 196

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMD 283
              D     ++Y+ D       +           P ++      +      ++  +    
Sbjct: 197 CDGDAVLGWQIYVRDVAGGPQTRISDAGGGDATEPSWNPGADPADRNTVAYTLTTNPDP- 255

Query: 284 IYSVDLQSNATERLTNTLFIN-------------ISASYSPDSSQIVFESDR-----EGK 325
               D+      R T  L  +              SAS+ PD   +VF S       +  
Sbjct: 256 ----DVDDGTELRATEGLGTDRPLLAGGHAEWGTRSASWLPDGKDVVFLSPYHTCGCDDF 311

Query: 326 EQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------------- 370
           + +Y + + +G++      ++      P W P    +   + + +               
Sbjct: 312 DHVYRVTAFDGTNPPDQLVNENRQVGPPTWFPPAGTVVVPRITPDPETVKKPDELLAAAQ 371

Query: 371 -FAIGVMKKDGSQERLLVEDSNLQAP---------------------------TWSPSGR 402
              +  +++DGS  R L      + P                           +++P GR
Sbjct: 372 IVTLQDVRQDGSDPRDLGLTILKEDPAARTNENPAVDPLFSPAAGFDPWTERQSYTPDGR 431

Query: 403 SLIFSRKKDGDTGS--KLYSIDLNGRNETLINTPA-----YASDPQWVG 444
            ++ +R +D D G   +++  D +G N   +         + +DP +  
Sbjct: 432 RIVVTRFEDTDAGRVERIWMADADGGNAAALPLAGRGPNDWDTDPAFSP 480



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 93/292 (31%), Gaps = 59/292 (20%)

Query: 209 SRDQILFEPRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMI---LA 262
             D       ++P+ +++    +   D   + R+++ D     A       R        
Sbjct: 416 GFDPWTERQSYTPDGRRIVVTRFEDTDAGRVERIWMADADGGNAAALPLAGRGPNDWDTD 475

Query: 263 PRFSSNGKRALISVQKDEAM-------DIYSVDLQSNA---TERLTNT--LFINISASYS 310
           P FS +G +   +               I   D+ S       R         +   ++S
Sbjct: 476 PAFSPDGTKLAFTRTSPGGTGDAAGPSRILVADVASGEILDEIRPPEGQQTGGDAQPTWS 535

Query: 311 PDSSQIVFESDR-----EGKEQLYVMQ-SNGSDQKRIS-----QDKEASYFDPVWSPQGD 359
            D   + F  +       G + ++V+  ++  +Q+ +S      D +     P +SP G 
Sbjct: 536 SDGVNLAFTRNHVINGDGGNKHIWVVPVADLGNQRDLSATICPGDCDVIDDSPAFSPDGL 595

Query: 360 LIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAP------------------- 395
            +AF +  G         + +    G   R+++       P                   
Sbjct: 596 KVAFNRKDGGGRVNQQAGVLIKPLRGGGCRVVLPSVQKDNPDGCDLPVPDATATGPHQPR 655

Query: 396 --TWSPSGRSLIFSRKKDGDTGS--KLYSIDLNGRNETLINT--PAYASDPQ 441
              W+P G  L+F+ +++    S  +L  +D+     T ++        +P 
Sbjct: 656 DVAWTPGGDKLVFTARRELAPNSMEQLSVLDIASGELTPVDNTHAGRQKEPA 707



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 60/381 (15%), Positives = 113/381 (29%), Gaps = 90/381 (23%)

Query: 119 EGKDRLRVEFRLW-----DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           +  DR  V + L      DV D  ++   +   +        H  ++   +S +      
Sbjct: 238 DPADRNTVAYTLTTNPDPDVDDGTELRATEGLGTDRPLLAGGH--AEWGTRSASWLPDGK 295

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +   L    +       +   V   DG N      + ++ +  P + P    V       
Sbjct: 296 DVVFLSPYHTCGCDDFDHVYRVTAFDGTNPPDQLVNENRQVGPPTWFPPAGTVVVPRITP 355

Query: 234 ED------------ILRVYLMDTRIDR-APKRIG-----------NFRSMILAPRFSS-- 267
           +                V L D R D   P+ +G              +  + P FS   
Sbjct: 356 DPETVKKPDELLAAAQIVTLQDVRQDGSDPRDLGLTILKEDPAARTNENPAVDPLFSPAA 415

Query: 268 -------------NGKRALISVQKD---EAMDIYSV-----------DLQSNATERLTNT 300
                        +G+R +++  +D     ++   +            L           
Sbjct: 416 GFDPWTERQSYTPDGRRIVVTRFEDTDAGRVERIWMADADGGNAAALPLAGRGP------ 469

Query: 301 LFINISASYSPDSSQIVFES-------DREGKEQLYVMQSNGS----DQKRISQDKEASY 349
              +   ++SPD +++ F         D  G  ++ V          + +     +    
Sbjct: 470 NDWDTDPAFSPDGTKLAFTRTSPGGTGDAAGPSRILVADVASGEILDEIRPPEGQQTGGD 529

Query: 350 FDPVWSPQGDLIAFTKF-----SGEKFAIGVMK-KDGSQERLLVE-------DSNLQAPT 396
             P WS  G  +AFT+       G    I V+   D   +R L         D    +P 
Sbjct: 530 AQPTWSSDGVNLAFTRNHVINGDGGNKHIWVVPVADLGNQRDLSATICPGDCDVIDDSPA 589

Query: 397 WSPSGRSLIFSRKKDGDTGSK 417
           +SP G  + F+RK  G   ++
Sbjct: 590 FSPDGLKVAFNRKDGGGRVNQ 610


>gi|289674678|ref|ZP_06495568.1| translocation protein TolB [Pseudomonas syringae pv. syringae FF5]
          Length = 117

 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 48/120 (40%), Gaps = 6/120 (5%)

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVE 388
              NG   +R++     +  +P  S     +           F + V        ++L +
Sbjct: 1   TNINGGGAERVTFVGNYNA-NPKLSADEKTLVMIHRQDGFTNFKVAVQDLARGSVKILTD 59

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFMD 447
            +  ++PT +P+G  +I++ ++ G     L  + +NGR    + T      +P W  +++
Sbjct: 60  SNLDESPTVAPNGTMVIYATRQQGRG--VLMLVSINGRVRLPLPTAQGEVREPSWSPYLN 117



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 5/115 (4%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDK 345
           ++     ER+T     N +   S D   +V    ++G    ++ V        K ++   
Sbjct: 2   NINGGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFTNFKVAVQDLARGSVKILT--D 59

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
                 P  +P G ++ +      +  + ++  +G  +  L      ++ P+WSP
Sbjct: 60  SNLDESPTVAPNGTMVIYATRQQGRGVLMLVSINGRVRLPLPTAQGEVREPSWSP 114



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 52/112 (46%), Gaps = 4/112 (3%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFIN 304
               +R+    +    P+ S++ K  ++  ++D      +   DL   + + LT++  ++
Sbjct: 5   GGGAERVTFVGNYNANPKLSADEKTLVMIHRQDGFTNFKVAVQDLARGSVKILTDSN-LD 63

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            S + +P+ + +++ + ++G+  L ++  NG   +      +    +P WSP
Sbjct: 64  ESPTVAPNGTMVIYATRQQGRGVLMLVSINGR-VRLPLPTAQGEVREPSWSP 114



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/112 (12%), Positives = 35/112 (31%), Gaps = 3/112 (2%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   R            P+ S +++ +    +  +      +    + R   +I    ++
Sbjct: 6   GGAERVTFVGN--YNANPKLSADEKTLV-MIHRQDGFTNFKVAVQDLARGSVKILTDSNL 62

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             +P  + NG   + + ++     +  V +       L          S+SP
Sbjct: 63  DESPTVAPNGTMVIYATRQQGRGVLMLVSINGRVRLPLPTAQGEVREPSWSP 114


>gi|37676004|ref|NP_936400.1| hypothetical protein VVA0344 [Vibrio vulnificus YJ016]
 gi|37200544|dbj|BAC96370.1| uncharacterized protein conserved in bacteria [Vibrio vulnificus
           YJ016]
          Length = 1105

 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 84/236 (35%), Gaps = 31/236 (13%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             T S+   L +   SP+ Q++A+         +++L+ ++   A   + +  S    P 
Sbjct: 49  TTTNSQPTWLRDIALSPDGQRIAFTYAG-----QIWLIASKGGEAI-PLTSADSYSENPI 102

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G+    +  +    D++ V       +RLT     ++  ++SPD  ++ F S R G
Sbjct: 103 WSPDGESIAFTTDRFGPGDVFLVSANGGDAKRLTYHFSKDVPYAFSPDGQEVYFRSSRIG 162

Query: 325 --------------KEQLYVMQSNGSDQKRISQDKEAS----------YFDPVWSPQGDL 360
                           Q+Y +  +G  +K +  +  +S           +  + SP    
Sbjct: 163 DIESSLNNGFAGSASAQIYSVDVSGGREKLLLANPISSLSINGQTGEYLYTDLPSPMEQE 222

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                 S     I        +   L       +   W+  GRS+ +  ++ G   
Sbjct: 223 WRKRDVSDAARDIWRFDPKTGKHTKLTNYLGEDRNAVWAEDGRSMFYLSERSGSFN 278



 Score = 93.5 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 24/147 (16%)

Query: 304 NISASY------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           N   ++      SPD  +I F        Q++++ S G +   ++     S  +P+WSP 
Sbjct: 52  NSQPTWLRDIALSPDGQRIAFTY----AGQIWLIASKGGEAIPLTSADSYSE-NPIWSPD 106

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKK------ 410
           G+ IAFT        + ++  +G   + L    +   P  +SP G+ + F   +      
Sbjct: 107 GESIAFTTDRFGPGDVFLVSANGGDAKRLTYHFSKDVPYAFSPDGQEVYFRSSRIGDIES 166

Query: 411 ------DGDTGSKLYSIDLNGRNETLI 431
                  G   +++YS+D++G  E L+
Sbjct: 167 SLNNGFAGSASAQIYSVDVSGGREKLL 193



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 83/224 (37%), Gaps = 26/224 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP   +VA     D     VY++      A KR+           FS++G   L + +
Sbjct: 360 AVSPVAPEVAIVARGD-----VYVVSLLSG-ATKRVTKTPQAERYLSFSNDGLSLLYASE 413

Query: 278 KDEAMDIY--SVDLQSNA--------TERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           ++   D++   ++    +         E+L++         YSPD ++I +   RE    
Sbjct: 414 RNGNWDVFHSYINDTGRSFSTSFDVVEEQLSDEAVDQTQPLYSPDGTKIAY---RENSNS 470

Query: 328 LYVMQS-NGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           + V    N S    +   +  SY D      WSP    +     +     I ++K DGS+
Sbjct: 471 IKVYDIENDSYHVLLDSSQLYSYVDQDLSYEWSPDSQYLVTRNRASYNADIVLLKADGSE 530

Query: 383 --ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              ++         P +S  G+ + +S  ++       +++  +
Sbjct: 531 KPLQITNTGFIEGEPKFSHDGQMIYWSTDRNSLRDIDKWAVQSD 574



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 63/376 (16%), Positives = 124/376 (32%), Gaps = 101/376 (26%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S D Y        D  S I F ++    G     + ++  +G + + LT    + +    
Sbjct: 93  SADSYSENPIWSPDGES-IAFTTDRFGPG----DVFLVSANGGDAKRLTYHFSKDVPY-A 146

Query: 219 FSPNQQKVAYATYDDEDI-------------LRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           FSP+ Q+V + +    DI              ++Y +D    R    + N  S       
Sbjct: 147 FSPDGQEVYFRSSRIGDIESSLNNGFAGSASAQIYSVDVSGGREKLLLANPIS-----SL 201

Query: 266 SSNGKRALISVQK---------------DEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           S NG+                       D A DI+  D ++    +LTN L  + +A ++
Sbjct: 202 SINGQTGEYLYTDLPSPMEQEWRKRDVSDAARDIWRFDPKTGKHTKLTNYLGEDRNAVWA 261

Query: 311 PDSSQIVFESDREGKEQLY--VMQSNGSDQKRISQDKEASYFDPVWSPQGDL-------- 360
            D   + + S+R G   ++  V+  + ++  +I+Q +         S QGDL        
Sbjct: 262 EDGRSMFYLSERSGSFNVWQRVLSDSSAEPVQITQHEFLPVRFLSISQQGDLAYGYDGDI 321

Query: 361 -------------------------------------IAFTKFSGE-----KFAIGVMKK 378
                                                IA +  + E     +  + V+  
Sbjct: 322 WFKGKDEADAKPLQVTIRQSFLSKGKRFVNLNHEATEIAVSPVAPEVAIVARGDVYVVSL 381

Query: 379 DGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR---------NE 428
                + + +    +   ++S  G SL+++ +++G+       I+  GR          E
Sbjct: 382 LSGATKRVTKTPQAERYLSFSNDGLSLLYASERNGNWDVFHSYINDTGRSFSTSFDVVEE 441

Query: 429 TLINTPAYASDPQWVG 444
            L +     + P +  
Sbjct: 442 QLSDEAVDQTQPLYSP 457



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 79/199 (39%), Gaps = 29/199 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S       I  + D    +Y V L S AT+R+T T       S+S D   +++ S+R 
Sbjct: 360 AVSPVAPEVAIVARGD----VYVVSLLSGATKRVTKTPQAERYLSFSNDGLSLLYASERN 415

Query: 324 GKEQLYVMQSNGSD----------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           G   ++    N +           ++++S D+      P++SP G  IA+ + S     I
Sbjct: 416 GNWDVFHSYINDTGRSFSTSFDVVEEQLS-DEAVDQTQPLYSPDGTKIAYRENSNS---I 471

Query: 374 GVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGDTGSKLYSIDLNG- 425
            V   +     +L++ S L +         WSP  + L+   +      + +  +  +G 
Sbjct: 472 KVYDIENDSYHVLLDSSQLYSYVDQDLSYEWSPDSQYLV--TRNRASYNADIVLLKADGS 529

Query: 426 -RNETLINTPAYASDPQWV 443
            +   + NT     +P++ 
Sbjct: 530 EKPLQITNTGFIEGEPKFS 548



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 14/112 (12%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPS 400
           +  +     D   SP G  IAFT        I ++   G +   L   DS  + P WSP 
Sbjct: 51  TNSQPTWLRDIALSPDGQRIAFTYAG----QIWLIASKGGEAIPLTSADSYSENPIWSPD 106

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-------AYASDPQWVGF 445
           G S+ F+  + G     ++ +  NG +   +          A++ D Q V F
Sbjct: 107 GESIAFTTDRFGPG--DVFLVSANGGDAKRLTYHFSKDVPYAFSPDGQEVYF 156



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 46/115 (40%), Gaps = 2/115 (1%)

Query: 216 EPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +P +SP+  K+AY    +   +  +      +     ++ ++    L+  +S + +  + 
Sbjct: 452 QPLYSPDGTKIAYRENSNSIKVYDIENDSYHVLLDSSQLYSYVDQDLSYEWSPDSQYLVT 511

Query: 275 SVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
             +     DI  +    +    ++TNT FI     +S D   I + +DR     +
Sbjct: 512 RNRASYNADIVLLKADGSEKPLQITNTGFIEGEPKFSHDGQMIYWSTDRNSLRDI 566


>gi|261419180|ref|YP_003252862.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. Y412MC61]
 gi|319765997|ref|YP_004131498.1| WD40-like beta Propeller containing protein [Geobacillus sp.
           Y412MC52]
 gi|261375637|gb|ACX78380.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. Y412MC61]
 gi|317110863|gb|ADU93355.1| WD40-like beta Propeller containing protein [Geobacillus sp.
           Y412MC52]
          Length = 673

 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 86/276 (31%), Gaps = 54/276 (19%)

Query: 210 RDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           R + + +P ++P+  +V +   + D+E   R +L     D + +     R     PRFS 
Sbjct: 20  RLRSVRDPHYAPDGTRVVFVEKSIDEEKQYRSHLWLWAADGSVRPWTFGRWRDTKPRFSP 79

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS------------- 314
           +G+       +     ++ +        +LT          +SPD +             
Sbjct: 80  DGQTIAFLSDRSGRTQLWLLPANGGEARQLTFFKNGVRDYVWSPDGTFLIALTTLGDEET 139

Query: 315 -----------------------QIVFESDREG-----KEQLYVMQSNGSDQKRISQDKE 346
                                  ++ ++SD  G     +  L  + +     + ++  +E
Sbjct: 140 IEDREEQKTAEQKPADSKPRVVERLYYKSDASGFLDGKRAVLARIDALSGKIEALT-GRE 198

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
                   SP G  +AF     E         I ++  +   E  L        +  WSP
Sbjct: 199 EEIGSFAISPDGRTLAFVANRNEDPDTTFTRDIVLLDLESKAETNLTNGCGTFASLAWSP 258

Query: 400 SGRSLIFSRK---KDGDTGSKLYSIDLNGRNETLIN 432
            G  L          G T  +LY  +     + ++ 
Sbjct: 259 DGTKLAAIGHDLAYLGATLHRLYVFEPERGTKRVLT 294



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/346 (16%), Positives = 106/346 (30%), Gaps = 83/346 (23%)

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           WR      S D               I F+S+       +  L ++  +G   R LT  +
Sbjct: 70  WRDTKPRFSPD------------GQTIAFLSDR----SGRTQLWLLPANGGEARQLTFFK 113

Query: 211 DQILFEPRFSPNQQKVA-----------------------------------YATYDDED 235
           + +     +SP+   +                                    Y   D   
Sbjct: 114 NGVRDY-VWSPDGTFLIALTTLGDEETIEDREEQKTAEQKPADSKPRVVERLYYKSDASG 172

Query: 236 ILR----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------IY 285
            L     V      +    + +      I +   S +G+       ++E  D      I 
Sbjct: 173 FLDGKRAVLARIDALSGKIEALTGREEEIGSFAISPDGRTLAFVANRNEDPDTTFTRDIV 232

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----REGKEQLYVMQSNGSDQKR 340
            +DL+S A   LTN      S ++SPD +++               +LYV +     ++ 
Sbjct: 233 LLDLESKAETNLTNGCGTFASLAWSPDGTKLAAIGHDLAYLGATLHRLYVFEPERGTKRV 292

Query: 341 ISQDKEASYFD--------------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           ++ D +    D              P+W+  G  +  T     +  +  +  DG    ++
Sbjct: 293 LTADWDVHLGDAMVGDTHADAKGPGPIWASDGSGLYVTASERGRVNLYFVPIDGPIVPVI 352

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431
             D +L   T  P+GR    +      +   LY++ L +G    L 
Sbjct: 353 EGDFHLYGFTVHPNGRQ-AVAAISSPTSVGDLYAVSLADGTKTRLT 397


>gi|119470702|ref|ZP_01613370.1| putative peptidase [Alteromonadales bacterium TW-7]
 gi|119446172|gb|EAW27450.1| putative peptidase [Alteromonadales bacterium TW-7]
          Length = 674

 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 48/268 (17%), Positives = 99/268 (36%), Gaps = 58/268 (21%)

Query: 222 NQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           + + V +            +  ++ +D +  +  + + +   M  +P  S +G+R     
Sbjct: 45  DGKTVYFVRNRMDIKTDRKVGNIWSVDYKTKQM-QPLTSGVHMDYSPVLSPDGQRLAFIS 103

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----------------- 319
            +D +  IY   L++ A  +++N      + S+SPDSSQ+VF                  
Sbjct: 104 TRDGSSQIYMKWLKTGAIAKISNLTSSPRAISWSPDSSQLVFSMFVPSKNTPPVNLPGKP 163

Query: 320 -----------------------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                                    ++G  QL+ + +NG + K+++ D+  +  D  +S 
Sbjct: 164 KGATWAEPAKFIDDVYYRADGGGYSQKGFNQLFTLDANGGNAKQLTSDEFDNAGDVSFSK 223

Query: 357 QGDLIAFTKFS-------GEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR 408
            G L+ ++               +  +  +      +   +   Q P  SP GR L ++ 
Sbjct: 224 DGSLLYYSANRHKNGELKPTNSEVYKLNLNTLAIEAVTNRNGPDQQPKVSPDGRYLAYTG 283

Query: 409 KKDGDT---GSKLYSIDL-NGRNETLIN 432
             D  T    ++LY  DL  G  ++L  
Sbjct: 284 YDDKRTNYENTQLYIRDLKTGNTKSLTA 311



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 105/302 (34%), Gaps = 62/302 (20%)

Query: 174 NSRILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           + + ++   +     +     ++  +D     ++ LT S   + + P  SP+ Q++A+ +
Sbjct: 45  DGKTVYFVRNRMDIKTDRKVGNIWSVDYKTKQMQPLT-SGVHMDYSPVLSPDGQRLAFIS 103

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-------------- 276
             D    ++Y+   +     K I N  S   A  +S +  + + S+              
Sbjct: 104 TRDGSS-QIYMKWLKTGAIAK-ISNLTSSPRAISWSPDSSQLVFSMFVPSKNTPPVNLPG 161

Query: 277 --------------------------QKDEAMDIYSVDLQSNATERLTNTLFINIS-ASY 309
                                      +     ++++D      ++LT+  F N    S+
Sbjct: 162 KPKGATWAEPAKFIDDVYYRADGGGYSQKGFNQLFTLDANGGNAKQLTSDEFDNAGDVSF 221

Query: 310 SPDSSQIVFESDREGKEQL-------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           S D S + + ++R    +L       Y +  N    + ++ ++      P  SP G  +A
Sbjct: 222 SKDGSLLYYSANRHKNGELKPTNSEVYKLNLNTLAIEAVT-NRNGPDQQPKVSPDGRYLA 280

Query: 363 FT-----KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTG 415
           +T     + + E   + +        + L  + +       W+ + + + FS   +G T 
Sbjct: 281 YTGYDDKRTNYENTQLYIRDLKTGNTKSLTANFDRSVGQIKWAANSKGVYFSYANEGQTT 340

Query: 416 SK 417
             
Sbjct: 341 LA 342



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 85/239 (35%), Gaps = 22/239 (9%)

Query: 168 GEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
            E   F   + + ++    S    N L  +D +G N + LT        +  FS +   +
Sbjct: 169 AEPAKFIDDVYYRADGGGYSQKGFNQLFTLDANGGNAKQLTSDEFDNAGDVSFSKDGSLL 228

Query: 227 AYATYDDEDI------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD- 279
            Y+    ++         VY ++     A + + N       P+ S +G+    +   D 
Sbjct: 229 YYSANRHKNGELKPTNSEVYKLNLNT-LAIEAVTNRNGPDQQPKVSPDGRYLAYTGYDDK 287

Query: 280 ----EAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSN 334
               E   +Y  DL++  T+ LT     ++    ++ +S  + F    EG+  L     +
Sbjct: 288 RTNYENTQLYIRDLKTGNTKSLTANFDRSVGQIKWAANSKGVYFSYANEGQTTLAYQPRS 347

Query: 335 G------SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           G           ++  +  S  D   S  GD IAFT  +  +    V      + + L 
Sbjct: 348 GKRKVITEQIGSVAFGRPYSGGDFDVSSNGD-IAFT-LADTQRPADVASIKRGKTQRLT 404



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 79/232 (34%), Gaps = 29/232 (12%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI------ 284
           Y  +   +++ +D     A +   +         FS +G     S  + +  ++      
Sbjct: 187 YSQKGFNQLFTLDANGGNAKQLTSDEFDNAGDVSFSKDGSLLYYSANRHKNGELKPTNSE 246

Query: 285 -YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQ 338
            Y ++L + A E +TN    +     SPD   + +    +        QLY+      + 
Sbjct: 247 VYKLNLNTLAIEAVTNRNGPDQQPKVSPDGRYLAYTGYDDKRTNYENTQLYIRDLKTGNT 306

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----------V 387
           K ++ + + S     W+     + F+  +  +  +    + G ++ +             
Sbjct: 307 KSLTANFDRSVGQIKWAANSKGVYFSYANEGQTTLAYQPRSGKRKVITEQIGSVAFGRPY 366

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
              +      S +G  + F+   D    + + SI   G+ + L    + A D
Sbjct: 367 SGGDFDV---SSNGD-IAFT-LADTQRPADVASIKR-GKTQRLTMLNSDALD 412


>gi|256393088|ref|YP_003114652.1| WD40 domain-containing protein beta Propeller [Catenulispora
           acidiphila DSM 44928]
 gi|256359314|gb|ACU72811.1| WD40 domain protein beta Propeller [Catenulispora acidiphila DSM
           44928]
          Length = 647

 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 96/306 (31%), Gaps = 89/306 (29%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT-- 244
           G   ++L + D DG N R L             + + + + + T    D        +  
Sbjct: 55  GPSTSTLYIADIDGKNERRLLQ-NSAFDRHASITADGKTIYFTTERAGDGNSSIYWASLN 113

Query: 245 ----RIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLT 298
                +   P   G+       P  S +G +     +   D    I+  +L+S A   LT
Sbjct: 114 GSGQGVGVQPSITGSAVDDTGVP--SPDGTKLAFMSTRSADHLAQIWVKNLKSEALTNLT 171

Query: 299 ---------NTLFINISASYSPDSSQIVFESDR----------EGKEQ-----LYVMQSN 334
                    N+   +   ++SPDS  I F SDR           G E      +Y+++++
Sbjct: 172 GTAALKGGSNSPDGHFRPAWSPDSQWIAFSSDRNTAWTGHGNGTGWEHTQELSIYIIKAD 231

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--------------FAIGVMKKDG 380
           G+  ++++         P WSP G  I + + + E                 I  +    
Sbjct: 232 GTGFRQVATKPGYCLGSPSWSPDGTRIVYYQLTREDTWAAHRPEDIGQCESQICSVNVAT 291

Query: 381 SQERLLVEDSN----------------------------------------LQAPTWSPS 400
                L   +N                                        +++P W+P 
Sbjct: 292 GATTQLTSTANVLKVSPRYVNNTEVGYLIKGGPNEGIAYVNGTLPTVLRAGMRSPIWTPD 351

Query: 401 GRSLIF 406
           G+S+I+
Sbjct: 352 GKSIIY 357



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 45/210 (21%), Positives = 68/210 (32%), Gaps = 34/210 (16%)

Query: 269 GKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EG 324
           GK  ++ + +       +Y  D+      RL      +  AS + D   I F ++R  +G
Sbjct: 44  GKLGVMLMNRIGPSTSTLYIADIDGKNERRLLQNSAFDRHASITADGKTIYFTTERAGDG 103

Query: 325 KEQLYVMQSNGSDQK---RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKD 379
              +Y    NGS Q    + S    A     V SP G  +AF           I V    
Sbjct: 104 NSSIYWASLNGSGQGVGVQPSITGSAVDDTGVPSPDGTKLAFMSTRSADHLAQIWVKNLK 163

Query: 380 GSQERLLVEDSNLQA----------PTWSPSGRSLIFSRKKD----GDTGS--------- 416
                 L   + L+           P WSP  + + FS  ++    G             
Sbjct: 164 SEALTNLTGTAALKGGSNSPDGHFRPAWSPDSQWIAFSSDRNTAWTGHGNGTGWEHTQEL 223

Query: 417 KLYSIDLNGRNETLINT-PAYA-SDPQWVG 444
            +Y I  +G     + T P Y    P W  
Sbjct: 224 SIYIIKADGTGFRQVATKPGYCLGSPSWSP 253



 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 84/234 (35%), Gaps = 48/234 (20%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS-----NATERLTN 299
            +  +R+    +       +++GK    + ++  D    IY   L            +T 
Sbjct: 68  GKNERRLLQNSAFDRHASITADGKTIYFTTERAGDGNSSIYWASLNGSGQGVGVQPSIT- 126

Query: 300 TLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRIS--------QDKEASY 349
              ++ +   SPD +++ F S R  +   Q++V          ++         +    +
Sbjct: 127 GSAVDDTGVPSPDGTKLAFMSTRSADHLAQIWVKNLKSEALTNLTGTAALKGGSNSPDGH 186

Query: 350 FDPVWSPQGDLIAFTKFSGEKF---------------AIGVMKKDGSQERLLVEDSNLQ- 393
           F P WSP    IAF+      +               +I ++K DG+  R +        
Sbjct: 187 FRPAWSPDSQWIAFSSDRNTAWTGHGNGTGWEHTQELSIYIIKADGTGFRQVATKPGYCL 246

Query: 394 -APTWSPSGRSLIF---------SRKKD---GDTGSKLYSIDL-NGRNETLINT 433
            +P+WSP G  +++         +  +    G   S++ S+++  G    L +T
Sbjct: 247 GSPSWSPDGTRIVYYQLTREDTWAAHRPEDIGQCESQICSVNVATGATTQLTST 300



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 79/227 (34%), Gaps = 24/227 (10%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------SVQKDEAM 282
            T   +   +V + +   D  P            P +S +G+           ++     
Sbjct: 411 VTMKPDGTDQVTVYNAASDGDPILEAEGLVGAFRPSWSPDGQWLAFGMGGWFQMRATMTA 470

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y V       E LT+         +SPD +++++      ++ L ++          +
Sbjct: 471 VVYRVKSDGTGLEALTDGSTNAGFPCFSPDGTKLLYRV-WGAEDGLRILDLATRTT---T 526

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSG 401
              +     P WS    ++   K S   F I  +  DG+  + L    +N     W+ +G
Sbjct: 527 ALTDWPDNVPDWSDDNVILFTRKTSATSFDICTINPDGTGLKQLTVSGANHAHAVWNGTG 586

Query: 402 RSLIFSRKKDG------------DTGSKLYSIDLNGRNETLINTPAY 436
           R ++++    G                +++S++ +G + T++    +
Sbjct: 587 R-ILYNSGDAGFREEAALYDDTFQPYGQIFSMNADGSDNTMLTDSQW 632



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 88/303 (29%), Gaps = 90/303 (29%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV--- 239
           +      + S+ ++  DG   R +       L  P +SP+  ++ Y     ED       
Sbjct: 215 TGWEHTQELSIYIIKADGTGFRQVATKPGYCLGSPSWSPDGTRIVYYQLTREDTWAAHRP 274

Query: 240 -----------------------------------YLMDTRIDRAPK------------- 251
                                              Y+ +T +    K             
Sbjct: 275 EDIGQCESQICSVNVATGATTQLTSTANVLKVSPRYVNNTEVGYLIKGGPNEGIAYVNGT 334

Query: 252 RIGNFRSMILAPRFSSNGKRALISV-------QKDEAMDIYSVDLQSNATERLTNTLFIN 304
                R+ + +P ++ +GK  +  V         D+ +  +  D             F++
Sbjct: 335 LPTVLRAGMRSPIWTPDGKSIIYDVPDADPVRTIDQTLYSWDSDWD---------YRFMD 385

Query: 305 ISASYSPDSS------------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           +    S                  +     +G +Q+ V  +       +  +     F P
Sbjct: 386 VFPVLSKQGRLAITQKQTGAAISSIVTMKPDGTDQVTVYNAASDGDPILEAEGLVGAFRP 445

Query: 353 VWSPQGDLIAFTKFSGEKFA--------IGVMKKDGSQERLLVEDS-NLQAPTWSPSGRS 403
            WSP G  +AF    G  F         +  +K DG+    L + S N   P +SP G  
Sbjct: 446 SWSPDGQWLAFGM--GGWFQMRATMTAVVYRVKSDGTGLEALTDGSTNAGFPCFSPDGTK 503

Query: 404 LIF 406
           L++
Sbjct: 504 LLY 506



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 79/238 (33%), Gaps = 34/238 (14%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTP---SRDQIL--------FEPRFSPNQQKVAYA---TY 231
           +G   +S+  M  DG +   +       D IL        F P +SP+ Q +A+     +
Sbjct: 403 TGAAISSIVTMKPDGTDQVTVYNAASDGDPILEAEGLVGAFRPSWSPDGQWLAFGMGGWF 462

Query: 232 DDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                +   +   + D    + + +  +    P FS +G + L   +   A D   + L 
Sbjct: 463 QMRATMTAVVYRVKSDGTGLEALTDGSTNAGFPCFSPDGTKLLY--RVWGAEDGLRI-LD 519

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                    T + +    +S D+  +           +  +  +G+  K+++    A++ 
Sbjct: 520 LATRTTTALTDWPDNVPDWSDDNVILFTRKTSATSFDICTINPDGTGLKQLTVSG-ANHA 578

Query: 351 DPVWSPQGDLIAFTKFSGEKFA--------------IGVMKKDGSQERLLVEDSNLQA 394
             VW+  G  I +                       I  M  DGS   +L +     +
Sbjct: 579 HAVWNGTGR-ILYNSGDAGFREEAALYDDTFQPYGQIFSMNADGSDNTMLTDSQWEDS 635



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 28/146 (19%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQ 382
              LY+   +G +++R+ Q+  A       +  G  I FT  +      +I     +GS 
Sbjct: 58  TSTLYIADIDGKNERRLLQNS-AFDRHASITADGKTIYFTTERAGDGNSSIYWASLNGSG 116

Query: 383 ERLLVEDS-------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-- 433
           + + V+ S       +   P  SP G  L F   +  D  ++++  +L     T +    
Sbjct: 117 QGVGVQPSITGSAVDDTGVP--SPDGTKLAFMSTRSADHLAQIWVKNLKSEALTNLTGTA 174

Query: 434 --------------PAYASDPQWVGF 445
                         PA++ D QW+ F
Sbjct: 175 ALKGGSNSPDGHFRPAWSPDSQWIAF 200


>gi|186681873|ref|YP_001865069.1| hypothetical protein Npun_F1419 [Nostoc punctiforme PCC 73102]
 gi|186464325|gb|ACC80126.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1833

 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 58/358 (16%), Positives = 125/358 (34%), Gaps = 44/358 (12%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAH--------TISD 160
             +      +  V        ++WDV   K +  K      ++   +A+        + SD
Sbjct: 1219 SIAYSPNGQQLVSASADKTIKIWDVSSGKLL--KTLTGHTSAVSSVAYNPNGQQLASASD 1276

Query: 161  DIYQSITGEKG-------DFNSRILFVSESVVSGII------KNSLCVMDRDGANIRYLT 207
            D    I              +S ++       +G          ++ + D +   +    
Sbjct: 1277 DNTIKIWDISSGKLLKTLPGHSSVVNSVAYNPNGQQLASASNDKTIKIWDINSGKLLKSL 1336

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                  +    +SPN Q++A A++D+     + + D    +  K +    +++ +  +S 
Sbjct: 1337 TGHSSEVNSVAYSPNGQQLASASFDN----TIKIWDISSGKLLKTLTGHSNVVFSVAYSP 1392

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            NG+    S   D+ + I+ V       + L     +  S +YSP+  Q+   SD    + 
Sbjct: 1393 NGQHLA-SASADKTIKIWDVS-SGKPLKSLAGHSNVVFSVAYSPNGQQLASASD---DKT 1447

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            + V   +         D        V+SP G  +A   +  +   I  +   G   + L 
Sbjct: 1448 IKVWDISNGKPLESMTDHSDRVNSVVYSPNGQHLASPSYD-KTIKIWNVS-SGKLLKTLT 1505

Query: 388  -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               S + +  +SP+G+ L  +     D   K++ ++     +TLI   +  +   +  
Sbjct: 1506 GHSSEVNSVAYSPNGQQLASASW---DKTIKVWDVNSGKPLKTLIGHSSVVNSVAYSP 1560



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 96/269 (35%), Gaps = 18/269 (6%)

Query: 172  DFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            D+ S + +      + S     ++ + D     +          +    +SPN Q++  A
Sbjct: 1173 DWVSSVAYSPNGYQLASASADKTIKIWDVSSGQLLKTLTGHSDRIRSIAYSPNGQQLVSA 1232

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            + D      + + D    +  K +    S + +  ++ NG++   S   D  + I+ +  
Sbjct: 1233 SADK----TIKIWDVSSGKLLKTLTGHTSAVSSVAYNPNGQQLA-SASDDNTIKIWDIS- 1286

Query: 290  QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                 + L     +  S +Y+P+  Q+   S+    + + +   N     +      +  
Sbjct: 1287 SGKLLKTLPGHSSVVNSVAYNPNGQQLASASN---DKTIKIWDINSGKLLKSLTGHSSEV 1343

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSR 408
                +SP G  +A   F      I  +   G   + L   SN + +  +SP+G+ L    
Sbjct: 1344 NSVAYSPNGQQLASASFDNT-IKIWDIS-SGKLLKTLTGHSNVVFSVAYSPNGQHLA--- 1398

Query: 409  KKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                D   K++ +  +G+    +   +  
Sbjct: 1399 SASADKTIKIWDVS-SGKPLKSLAGHSNV 1426



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 111/317 (35%), Gaps = 34/317 (10%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPAS---WRKIAHTISDDIYQSITGEKGDFNSRILFV---- 180
             ++WD+ + K +      S   +   +      ++   Y          + ++L      
Sbjct: 1448 IKVWDISNGKPLESMTDHSDRVNSVVYSPNGQHLASPSYDKTIKIWNVSSGKLLKTLTGH 1507

Query: 181  ------------SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                         + + S     ++ V D +             ++    +SPN Q++A 
Sbjct: 1508 SSEVNSVAYSPNGQQLASASWDKTIKVWDVNSGKPLKTLIGHSSVVNSVAYSPNGQQLAS 1567

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            A++D+     + + D    +  K +    + + +  +S NG++   S   D  + I+ V 
Sbjct: 1568 ASFDN----TIKVWDVSSGKLLKTLTGHSNAVSSVAYSPNGQQLA-SASLDNTIKIWDVS 1622

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  + LT       S +YSP+  Q+   SD      + +   +     +       +
Sbjct: 1623 SA-KLLKTLTGHSDAVSSVAYSPNGQQLASASD---DNTIKIWDVSSGKLLKSLSGHSNA 1678

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFS 407
             +   +SP G  +A +  +     I  +   G   + L   S+     T++P+G+ L  +
Sbjct: 1679 VYSIAYSPNGQQLA-SASADNTIKIWDVS-SGKLLKSLSGHSDWVMRVTYNPNGQQLASA 1736

Query: 408  RKKDGDTGSKLYSIDLN 424
                 D    L+ +D +
Sbjct: 1737 SV---DKTIILWDLDFD 1750



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 83/228 (36%), Gaps = 15/228 (6%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                    +    +SPN  ++A A+ D      + + D    +  K +      I +  +
Sbjct: 1167 TLEGHSDWVSSVAYSPNGYQLASASADK----TIKIWDVSSGQLLKTLTGHSDRIRSIAY 1222

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S NG++ + S   D+ + I+ V       + LT       S +Y+P+  Q+   SD    
Sbjct: 1223 SPNGQQLV-SASADKTIKIWDVS-SGKLLKTLTGHTSAVSSVAYNPNGQQLASASD---D 1277

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
              + +   +     +      +      ++P G  +A +  + +   I  +   G   + 
Sbjct: 1278 NTIKIWDISSGKLLKTLPGHSSVVNSVAYNPNGQQLA-SASNDKTIKIWDIN-SGKLLKS 1335

Query: 386  LV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            L    S + +  +SP+G+ L        D   K++ I      +TL  
Sbjct: 1336 LTGHSSEVNSVAYSPNGQQLA---SASFDNTIKIWDISSGKLLKTLTG 1380


>gi|17225210|gb|AAL37301.1|AF323585_1 beta transducin-like protein HET-D2Y [Podospora anserina]
          Length = 1376

 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 98/285 (34%), Gaps = 25/285 (8%)

Query: 170  KGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             G +   + F  +S  V SG   +++ + +    +           ++   FSP+ + V 
Sbjct: 872  HGGWVLSVAFSPDSKWVASGSADSTIKIWEAATGSCTQTLEGHGGWVYSVAFSPDSKWVV 931

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D      + + +       + +      + +  FS + K    S   D  + I+  
Sbjct: 932  SGSADS----TIKIWEAATGSCTQTLEGHGGWVWSVAFSPDSKWVA-SGSADSTIKIWEA 986

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                + T+ L        S ++SPDS  +   SD      + + ++      +  +    
Sbjct: 987  -ATGSCTQTLEGHGGPVNSVAFSPDSKWVASGSD---DHTIKIWEAATGSCTQTLEGHGG 1042

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
                  +SP    +A      +   I + +         +E     + +  +SP  + ++
Sbjct: 1043 PVNSVTFSPDSKWVA---SGSDDHTIKIWEAATGSCTQTLEGHGGWVYSVAFSPDSKWVV 1099

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
                   D+  K++        +TL      +N+ A++ D +WV 
Sbjct: 1100 ---SGSADSTIKIWEAATGSCTQTLEGHGGSVNSVAFSPDSKWVA 1141



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 94/285 (32%), Gaps = 25/285 (8%)

Query: 170  KGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             G +   + F  +S  VVSG   +++ + +    +           ++   FSP+ + VA
Sbjct: 914  HGGWVYSVAFSPDSKWVVSGSADSTIKIWEAATGSCTQTLEGHGGWVWSVAFSPDSKWVA 973

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D      + + +       + +      + +  FS + K    S   D  + I+  
Sbjct: 974  SGSADS----TIKIWEAATGSCTQTLEGHGGPVNSVAFSPDSKWVA-SGSDDHTIKIWEA 1028

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                + T+ L        S ++SPDS  +   SD      + + ++      +  +    
Sbjct: 1029 -ATGSCTQTLEGHGGPVNSVTFSPDSKWVASGSD---DHTIKIWEAATGSCTQTLEGHGG 1084

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
              +   +SP    +           I + +         +E    ++ +  +SP  + + 
Sbjct: 1085 WVYSVAFSPDSKWVVSGSADST---IKIWEAATGSCTQTLEGHGGSVNSVAFSPDSKWVA 1141

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETLINTPAYA------SDPQWVG 444
                   D   K++        +TL     +A       D +WV 
Sbjct: 1142 SGST---DRTIKIWEAATGSCTQTLEGHGGWAWSVAFSPDSKWVA 1183



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 92/268 (34%), Gaps = 23/268 (8%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG+  +++ + +    +           +    FSP+ + VA  + D      + + +
Sbjct: 846  VASGLDDSTIKIWEAATGSCTQTLEGHGGWVLSVAFSPDSKWVASGSADS----TIKIWE 901

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                   + +      + +  FS + K  ++S   D  + I+      + T+ L      
Sbjct: 902  AATGSCTQTLEGHGGWVYSVAFSPDSKW-VVSGSADSTIKIWEA-ATGSCTQTLEGHGGW 959

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              S ++SPDS  +   S       + + ++      +  +          +SP    +A 
Sbjct: 960  VWSVAFSPDSKWVASGS---ADSTIKIWEAATGSCTQTLEGHGGPVNSVAFSPDSKWVA- 1015

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 +   I + +         +E     + + T+SP  + +        D   K++  
Sbjct: 1016 --SGSDDHTIKIWEAATGSCTQTLEGHGGPVNSVTFSPDSKWVASGSD---DHTIKIWEA 1070

Query: 422  DLNGRNETL------INTPAYASDPQWV 443
                  +TL      + + A++ D +WV
Sbjct: 1071 ATGSCTQTLEGHGGWVYSVAFSPDSKWV 1098



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 92/270 (34%), Gaps = 25/270 (9%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG   +++ + +    +           +    FSP+ + VA  + D      + + +
Sbjct: 1014 VASGSDDHTIKIWEAATGSCTQTLEGHGGPVNSVTFSPDSKWVASGSDDH----TIKIWE 1069

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                   + +      + +  FS + K  ++S   D  + I+      + T+ L      
Sbjct: 1070 AATGSCTQTLEGHGGWVYSVAFSPDSKW-VVSGSADSTIKIWEA-ATGSCTQTLEGHGGS 1127

Query: 304  NISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++SPDS  +   S DR     + + ++      +  +      +   +SP    +A
Sbjct: 1128 VNSVAFSPDSKWVASGSTDRT----IKIWEAATGSCTQTLEGHGGWAWSVAFSPDSKWVA 1183

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                      I + +         +E     + +  +SP  + +        D   K++ 
Sbjct: 1184 SGSADST---IKIWEAATGSCTQTLEGHGGPVNSVAFSPDSKWVASGSD---DHTIKIWE 1237

Query: 421  IDLNGRNETL------INTPAYASDPQWVG 444
                   +TL      + + A++ D +WV 
Sbjct: 1238 AATGSCTQTLEGHGRSVKSVAFSPDSKWVA 1267



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 81/250 (32%), Gaps = 23/250 (9%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             R         +    FSP+ + VA    D      + + +       + +      +L+
Sbjct: 823  CRQTLEGHSGSVNSVTFSPDSKWVASGLDDS----TIKIWEAATGSCTQTLEGHGGWVLS 878

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              FS + K    S   D  + I+      + T+ L        S ++SPDS  +V  S  
Sbjct: 879  VAFSPDSKWVA-SGSADSTIKIWEA-ATGSCTQTLEGHGGWVYSVAFSPDSKWVVSGS-- 934

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                 + + ++      +  +      +   +SP    +A          I + +     
Sbjct: 935  -ADSTIKIWEAATGSCTQTLEGHGGWVWSVAFSPDSKWVASGSADST---IKIWEAATGS 990

Query: 383  ERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTP 434
                +E     + +  +SP  + +        D   K++        +TL      +N+ 
Sbjct: 991  CTQTLEGHGGPVNSVAFSPDSKWVASGSD---DHTIKIWEAATGSCTQTLEGHGGPVNSV 1047

Query: 435  AYASDPQWVG 444
             ++ D +WV 
Sbjct: 1048 TFSPDSKWVA 1057



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 81/236 (34%), Gaps = 21/236 (8%)

Query: 219  FSPNQQ--KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FSP +   +  +   + + I    +++   +   + +      + +  FS + K    S 
Sbjct: 791  FSPARSITRGLFTQEERKWITSRPIVEDNWNACRQTLEGHSGSVNSVTFSPDSKWVA-SG 849

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              D  + I+      + T+ L       +S ++SPDS  +   S       + + ++   
Sbjct: 850  LDDSTIKIWEA-ATGSCTQTLEGHGGWVLSVAFSPDSKWVASGS---ADSTIKIWEAATG 905

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQA 394
               +  +      +   +SP    +           I + +         +E     + +
Sbjct: 906  SCTQTLEGHGGWVYSVAFSPDSKWVVSGSADST---IKIWEAATGSCTQTLEGHGGWVWS 962

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
              +SP  + +        D+  K++        +TL      +N+ A++ D +WV 
Sbjct: 963  VAFSPDSKWVA---SGSADSTIKIWEAATGSCTQTLEGHGGPVNSVAFSPDSKWVA 1015


>gi|145509352|ref|XP_001440616.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407841|emb|CAK73219.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1876

 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 105/295 (35%), Gaps = 39/295 (13%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              R+WDVK   Q                 H  SD +        G           ++ S
Sbjct: 1618 SIRVWDVKTGIQKAKLN-----------GH--SDRVLSVNFSPDG----------TTLAS 1654

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G   N++ + D      +        I++   FSP+   +A  + D+     + L D + 
Sbjct: 1655 GSYDNTIRLWDIKKGQQKAKLDGHSSIVWAVNFSPDGTTIASCSDDN----SIRLWDVKT 1710

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINI 305
             +  +++      +++  FS NG     S   D+++ ++  D+++   + +L     I  
Sbjct: 1711 GQQIEKLDGHPREVMSVIFSPNGTTLA-SGSADKSIRLW--DVKTGQQKAKLGGHSGIIY 1767

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S ++SPD + +   S       + +       QK          +   +SP G  +A   
Sbjct: 1768 SVNFSPDGTTLASGSR---DNSICLWDVKTGQQKAKLDGHSQIVWSVNFSPDGSKLASCS 1824

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKL 418
               +  +I +      Q++  ++  + +  +  +SP G    F   +D     ++
Sbjct: 1825 ---DDQSIRLWDIKTGQQKAKLDGHSNRVLSVNFSPDGYVYPFMGSQDRIIDRQI 1876



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 60/359 (16%), Positives = 124/359 (34%), Gaps = 46/359 (12%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQ----------IIGKKFFSSPASWRKIAHTISDDIYQSI 166
                         LWD+K  +Q          ++   F     +    +   S  ++   
Sbjct: 1524 TTLASGSYDNTIILWDIKKGQQKAKLDGHSDRVLSVNFSPDGITLASGSQDKSIRLWNIK 1583

Query: 167  TGEK----GDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            T ++       + R+L V+ S       SG   NS+ V D      +         +   
Sbjct: 1584 TRQQKAKLDGHSDRVLSVNFSPDGITLASGSQDNSIRVWDVKTGIQKAKLNGHSDRVLSV 1643

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+   +A  +YD+     + L D +  +   ++    S++ A  FS +G     S  
Sbjct: 1644 NFSPDGTTLASGSYDN----TIRLWDIKKGQQKAKLDGHSSIVWAVNFSPDGTTIA-SCS 1698

Query: 278  KDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D ++ ++  D+++    E+L       +S  +SP+ + +   S     + + +      
Sbjct: 1699 DDNSIRLW--DVKTGQQIEKLDGHPREVMSVIFSPNGTTLASGS---ADKSIRLWDVKTG 1753

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             QK          +   +SP G  +A          I +      Q++  ++  +    +
Sbjct: 1754 QQKAKLGGHSGIIYSVNFSPDGTTLASGSRDNS---ICLWDVKTGQQKAKLDGHSQIVWS 1810

Query: 397  --WSPSGRSLIFSRKKDGDTGSKLYSI-------DLNGRNETLINTPAYASDPQWVGFM 446
              +SP G  L        D   +L+ I        L+G +  +++   ++ D     FM
Sbjct: 1811 VNFSPDGSKLASCSD---DQSIRLWDIKTGQQKAKLDGHSNRVLSVN-FSPDGYVYPFM 1865



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 119/348 (34%), Gaps = 40/348 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQ---IIGKKFFSSPASWRKIAHTISDDIYQSIT----GE 169
                        RLWDVK  +Q   + G   +    ++     T++   Y +       +
Sbjct: 1482 TTLASGSDDNSIRLWDVKTGQQKAKLDGHSDYVRSVNFSPDGTTLASGSYDNTIILWDIK 1541

Query: 170  KG-------DFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            KG         + R+L V+ S       SG    S+ + +      +         +   
Sbjct: 1542 KGQQKAKLDGHSDRVLSVNFSPDGITLASGSQDKSIRLWNIKTRQQKAKLDGHSDRVLSV 1601

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+   +A  + D+     + + D +      ++      +L+  FS +G     S  
Sbjct: 1602 NFSPDGITLASGSQDN----SIRVWDVKTGIQKAKLNGHSDRVLSVNFSPDGTTLA-SGS 1656

Query: 278  KDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  + ++  D++    + +L     I  + ++SPD + I   SD      + +      
Sbjct: 1657 YDNTIRLW--DIKKGQQKAKLDGHSSIVWAVNFSPDGTTIASCSD---DNSIRLWDVKTG 1711

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             Q              ++SP G  +A +  + +   +  +K    + +L      + +  
Sbjct: 1712 QQIEKLDGHPREVMSVIFSPNGTTLA-SGSADKSIRLWDVKTGQQKAKLGGHSGIIYSVN 1770

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWV 443
            +SP G +L       G   + +   D+  G+ +  ++  +      W 
Sbjct: 1771 FSPDGTTLA-----SGSRDNSICLWDVKTGQQKAKLDGHSQI---VWS 1810



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 56/167 (33%), Gaps = 27/167 (16%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        RLWDVK  +Q                 H  S  IY       G     
Sbjct: 1734 TTLASGSADKSIRLWDVKTGQQKAKLG-----------GH--SGIIYSVNFSPDG----- 1775

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                  ++ SG   NS+C+ D      +       QI++   FSP+  K+A  + D    
Sbjct: 1776 -----TTLASGSRDNSICLWDVKTGQQKAKLDGHSQIVWSVNFSPDGSKLASCSDDQ--- 1827

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
              + L D +  +   ++    + +L+  FS +G        +D  +D
Sbjct: 1828 -SIRLWDIKTGQQKAKLDGHSNRVLSVNFSPDGYVYPFMGSQDRIID 1873



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 27/166 (16%)

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +L+ N    L        S  +SPD + +   SD      + +       QK        
Sbjct: 1456 NLKINDLHSLVGHSGTVQSVHFSPDGTTLASGSD---DNSIRLWDVKTGQQKAKLDGHSD 1512

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGV------MKKDGSQERLLVEDSNLQAPTWSPSG 401
                  +SP G  +A   +        +       K DG  +R+L       +  +SP G
Sbjct: 1513 YVRSVNFSPDGTTLASGSYDNTIILWDIKKGQQKAKLDGHSDRVL-------SVNFSPDG 1565

Query: 402  RSLIFSRKKDGDTGSKLYSI-------DLNGRNETLINTPAYASDP 440
             +L    +   D   +L++I        L+G ++ +++   ++ D 
Sbjct: 1566 ITLASGSQ---DKSIRLWNIKTRQQKAKLDGHSDRVLSVN-FSPDG 1607


>gi|269928705|ref|YP_003321026.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269788062|gb|ACZ40204.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 644

 Score = 99.7 bits (247), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 105/316 (33%), Gaps = 53/316 (16%)

Query: 176 RILFVSESVVSG----IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           R+ FV             ++ + ++D  G   R ++         PR+SP+ + +A+ + 
Sbjct: 29  RVAFVVAEASVDYQEPSPRSRIWLVDVAGGEPRQVSQGPGTDDL-PRWSPDGETLAFRS- 86

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-------QKDEAMD- 283
           D +      L   R    P+ +  F + I A  ++ +G+   +         + +     
Sbjct: 87  DRKKRGTGQLYLLRSWAEPELLREFDAGISAIAWAPDGRTIAVIAPDAVGRNRPEGKDWV 146

Query: 284 ----------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESD-----REGKEQ 327
                     I+ VD+ S     LT         ++SPD S I    SD        + +
Sbjct: 147 LFEEEHAFGRIWLVDVASGEARCLTTGPVHVWELAWSPDGSAIAAIVSDLPYAWSWYRAR 206

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKKDGSQ 382
           L  +     +   +    E     PVWSP G  I      ++        + V+   G  
Sbjct: 207 LVRIDVATGEVTTL-YAPERQITGPVWSPDGRAIVLITSTWSDPGMSGGDVLVVPAAGGT 265

Query: 383 ERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY---- 436
            + L   E  +  +  W   GR    + +++    + +  +D  G   T           
Sbjct: 266 AQPLTAGEPRSYLSLHWVADGRLFAAALERN---RAAICLLDPTGAGRTQTLWAGERFFN 322

Query: 437 --------ASDPQWVG 444
                   ++D +WV 
Sbjct: 323 VYGTGVDISADGRWVA 338



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 71/215 (33%), Gaps = 42/215 (19%)

Query: 267 SNGKRALISV--------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             G+R    V        +      I+ VD+      +++     +    +SPD   + F
Sbjct: 25  PGGRRVAFVVAEASVDYQEPSPRSRIWLVDVAGGEPRQVSQGPGTDDLPRWSPDGETLAF 84

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--------KFSGEK 370
            SDR+ +    +       +  + ++ +A      W+P G  IA          +  G+ 
Sbjct: 85  RSDRKKRGTGQLYLLRSWAEPELLREFDAGISAIAWAPDGRTIAVIAPDAVGRNRPEGKD 144

Query: 371 F----------AIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSL---------IFSRKK 410
           +           I ++     + R L     ++    WSP G ++          +S  +
Sbjct: 145 WVLFEEEHAFGRIWLVDVASGEARCLTTGPVHVWELAWSPDGSAIAAIVSDLPYAWSWYR 204

Query: 411 DGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                ++L  ID+  G   TL       + P W  
Sbjct: 205 -----ARLVRIDVATGEVTTLYAPERQITGPVWSP 234



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 84/256 (32%), Gaps = 40/256 (15%)

Query: 221 PNQQKVAYAT------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           P  ++VA+        Y +        +       P+++         PR+S +G+    
Sbjct: 25  PGGRRVAFVVAEASVDYQEPSPRSRIWLVDVAGGEPRQVSQGPGTDDLPRWSPDGETLAF 84

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES-DREGKE------ 326
              + +        L+S A   L       ISA +++PD   I   + D  G+       
Sbjct: 85  RSDRKKRGTGQLYLLRSWAEPELLREFDAGISAIAWAPDGRTIAVIAPDAVGRNRPEGKD 144

Query: 327 -----------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSG 368
                      +++++     + + ++      + +  WSP G  IA       +     
Sbjct: 145 WVLFEEEHAFGRIWLVDVASGEARCLTTGPVHVW-ELAWSPDGSAIAAIVSDLPYAWSWY 203

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK---DGDTGSKLYSIDLNG 425
               + +    G    L   +  +  P WSP GR+++         G +G  +  +   G
Sbjct: 204 RARLVRIDVATGEVTTLYAPERQITGPVWSPDGRAIVLITSTWSDPGMSGGDVLVVPAAG 263

Query: 426 RNETLINTPAYASDPQ 441
                +     A +P+
Sbjct: 264 GTAQPLT----AGEPR 275


>gi|121996956|ref|YP_001001743.1| peptidase S41 [Halorhodospira halophila SL1]
 gi|121588361|gb|ABM60941.1| peptidase S41 [Halorhodospira halophila SL1]
          Length = 1193

 Score = 99.7 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 70/181 (38%), Gaps = 27/181 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G++ + S       D++ V  +     RLT     ++ +++S D   +VF S R
Sbjct: 40  PSISPDGEKLVFSW----GGDLWRVPAEGGTATRLTGHRLDDLHSAWSGDGDTLVFSSLR 95

Query: 323 EGKEQLYVMQSNGSDQKRISQD---------KEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +G   L+ M+ +G+  ++++                 +P+ +    L A        + +
Sbjct: 96  DGYLNLWRMRPDGTGLRQVTYGDRFLRHPGFGVGRDGEPLVTFSAQLEADVYRDQRPYGV 155

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS----------RKKDGDTGSKLYSIDL 423
                 G + + L  D+    P+ SP GR + F+          R   G     ++  D 
Sbjct: 156 A---PGGGEPQRL-HDAFGSEPSTSPDGRYVAFTRGGAYHGWSRRHYHGPDARDVWLYDR 211

Query: 424 N 424
           +
Sbjct: 212 D 212



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 32/231 (13%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P  SP+ +K+ ++     D+ RV            R+   R   L   +S +G   + S
Sbjct: 39  FPSISPDGEKLVFSW--GGDLWRV----PAEGGTATRLTGHRLDDLHSAWSGDGDTLVFS 92

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASY--SPDSSQIVFES-----DREGKEQL 328
             +D  ++++ +        ++T          +    D   +V  S     D    ++ 
Sbjct: 93  SLRDGYLNLWRMRPDGTGLRQVTYGDRFLRHPGFGVGRDGEPLVTFSAQLEADVYRDQRP 152

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------------FSGEKFAIGVM 376
           Y +   G + +R+    +A   +P  SP G  +AFT+               +   + + 
Sbjct: 153 YGVAPGGGEPQRL---HDAFGSEPSTSPDGRYVAFTRGGAYHGWSRRHYHGPDARDVWLY 209

Query: 377 KKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +D      L +    +     W    R+LIF   ++ D    L+   + G
Sbjct: 210 DRDEEAFSPLTQRRAGDDGQAQWL-DERTLIFLSDRE-DNTVNLFRARVEG 258



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 8/135 (5%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L  +      A  SPD ++I F   R G+  L V   +G  ++ + +  +A+    
Sbjct: 519 TLRPLVQSEEHERDARPSPDGTRIAF---RRGRGDLVVQDLDGGGERTLVEGWDATIDW- 574

Query: 353 VWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRK 409
            WSP G  IA+T+        + ++  DGS E   +     N   P WS  GR L F   
Sbjct: 575 RWSPDGRHIAYTQNDLDFSANVFIVPADGSAEPVNITRHPRNDLNPHWSADGRVLTFISN 634

Query: 410 KDGDTGSKLYSIDLN 424
           + GD+   LY + L+
Sbjct: 635 RSGDS-YDLYRVYLD 648



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 5/131 (3%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + +          R S +G R      +    D+   DL       L       I   +S
Sbjct: 521 RPLVQSEEHERDARPSPDGTRIAF---RRGRGDLVVQDLDGGGERTLVEGWDATIDWRWS 577

Query: 311 PDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSG 368
           PD   I +  +D +    ++++ ++GS +         +  +P WS  G ++ F    SG
Sbjct: 578 PDGRHIAYTQNDLDFSANVFIVPADGSAEPVNITRHPRNDLNPHWSADGRVLTFISNRSG 637

Query: 369 EKFAIGVMKKD 379
           + + +  +  D
Sbjct: 638 DSYDLYRVYLD 648



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 80/236 (33%), Gaps = 26/236 (11%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK- 278
           SP+  ++A+            ++        + +       +  R+S +G+    +    
Sbjct: 536 SPDGTRIAF-----RRGRGDLVVQDLDGGGERTLVEGWDATIDWRWSPDGRHIAYTQNDL 590

Query: 279 DEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGS 336
           D + +++ V    +     +T     +++  +S D   + F S+R G    LY +  +  
Sbjct: 591 DFSANVFIVPADGSAEPVNITRHPRNDLNPHWSADGRVLTFISNRSGDSYDLYRVYLDPE 650

Query: 337 DQK--RISQDKEASYFD---------PVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQE 383
             +  R+  D+               PV +P    +  T+     E   + +       E
Sbjct: 651 LARYSRLELDRYYRQGREAAERREPLPVLTPGATDVTRTETVTQEEPPELELEGAWRRVE 710

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           R+     N  A   +P+G   +F+   +G     L  ++ +G     +   A    
Sbjct: 711 RVSSAAGNEYASRMTPAGDRYVFNSAGEG-----LMVMNWDGSERRRLGPVADIQH 761



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 72/214 (33%), Gaps = 21/214 (9%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  L V D DG   R L    D  +   R+SP+ + +AY   D +    V+++     
Sbjct: 546 RGRGDLVVQDLDGGGERTLVEGWDATIDW-RWSPDGRHIAYTQNDLDFSANVFIVPADGS 604

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATE--RLTNTLFIN 304
             P  I       L P +S++G+       +   + D+Y V L        RL    +  
Sbjct: 605 AEPVNITRHPRNDLNPHWSADGRVLTFISNRSGDSYDLYRVYLDPELARYSRLELDRYYR 664

Query: 305 IS----------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--ASYFDP 352
                          +P ++ +         ++           +R+ +      + +  
Sbjct: 665 QGREAAERREPLPVLTPGATDV--TRTETVTQEEPPELELEGAWRRVERVSSAAGNEYAS 722

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             +P GD   F         + VM  DGS+ R L
Sbjct: 723 RMTPAGDRYVFNSAGEG---LMVMNWDGSERRRL 753



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 87/282 (30%), Gaps = 35/282 (12%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA------- 229
           + F ++             +   G   + L    D    EP  SP+ + VA+        
Sbjct: 136 VTFSAQLEADVYRDQRPYGVAPGGGEPQRL---HDAFGSEPSTSPDGRYVAFTRGGAYHG 192

Query: 230 ----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                Y   D   V+L D   +                ++        +S ++D  ++++
Sbjct: 193 WSRRHYHGPDARDVWLYDRDEEAFSPLTQRRAGDDGQAQWLDERTLIFLSDREDNTVNLF 252

Query: 286 SVDLQS--NATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
              ++      ERLT+    ++ A   +P++ + V +                 +   + 
Sbjct: 253 RARVEGASGGVERLTHFDERDVQAFDVAPEAGRAVLQVWDRLYLLDLDRLDAEPEPVALR 312

Query: 343 QDKEASY-----------FDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDS 390
                              +   SP G+++A+  +      + V   D  S  R +  D+
Sbjct: 313 AGDPGHDRYELRSVDRQVSEAALSPDGEVMAYIAYG----RVYVRHMDEHSPTRPVTPDT 368

Query: 391 NLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           + +     WSP G  L F+R  DG        + L       
Sbjct: 369 HARHRDLRWSPDGLRLYFTRDADGTESIYTAGVALTREEVRR 410



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 8/91 (8%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKK 410
           P  SP G+ + F+        +  +  +G     L           WS  G +L+FS  +
Sbjct: 40  PSISPDGEKLVFSWGGD----LWRVPAEGGTATRLTGHRLDDLHSAWSGDGDTLVFSSLR 95

Query: 411 DGDTGSKLYSIDLNGRNETLIN-TPAYASDP 440
           DG     L+ +  +G     +     +   P
Sbjct: 96  DG--YLNLWRMRPDGTGLRQVTYGDRFLRHP 124



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 72/207 (34%), Gaps = 27/207 (13%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDTRIDRA 249
           + ++  DG+          +    P +S + + + + +    D     RVYL       +
Sbjct: 596 VFIVPADGSAEPVNITRHPRNDLNPHWSADGRVLTFISNRSGDSYDLYRVYLDPELARYS 655

Query: 250 PKRIGNF--RSMILA------PRFSS---NGKRALISVQKDEAMDIYSVDLQSNATERLT 298
              +  +  +    A      P  +    +  R     Q++               ER++
Sbjct: 656 RLELDRYYRQGREAAERREPLPVLTPGATDVTRTETVTQEEPPELELE--GAWRRVERVS 713

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +      ++  +P   + VF S  EG   L VM  +GS+++R+    +  +       +G
Sbjct: 714 SAAGNEYASRMTPAGDRYVFNSAGEG---LMVMNWDGSERRRLGPVADIQHLTL----RG 766

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERL 385
           D + +          GV++  G + R 
Sbjct: 767 DRVVYVA----GGRAGVVRLGGGEHRR 789


>gi|260173877|ref|ZP_05760289.1| putative exported peptidase [Bacteroides sp. D2]
 gi|315922140|ref|ZP_07918380.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696015|gb|EFS32850.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 1094

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 67/203 (33%), Gaps = 29/203 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    IY+V        ++T     +    +SPDS QI F SDR 
Sbjct: 30  ALSPDGTTIAFTYKGD----IYTVPSTGGRATQITTNPAFDTEPVWSPDSKQIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFA 372
           G   ++V+ S G   +R++    +    PV       I FT             SG+   
Sbjct: 86  GSLDVFVVSSEGGAPQRLTTHSGSE--KPVAYKDNKHILFTANIAPSAEDAGFPSGQFQQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---------IFSRKKDGDTGSKLYSIDL 423
           +  +   G +  +      ++  + +  G  L          + + +       +++   
Sbjct: 144 VYEVAVTGGRPAMFSSMP-MECISINKEGVMLYQDKKGYEDYWRKHQVSPIARDIWTYTP 202

Query: 424 NGRN--ETLINTPAYASDPQWVG 444
             +   +          +P W  
Sbjct: 203 GKKPVYQKQTTFGGEDREPVWSP 225



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 56/303 (18%), Positives = 112/303 (36%), Gaps = 42/303 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ EKG FN   +F      +   + +          +R+L+ S    L    +  +
Sbjct: 230 FYYLSEEKGSFN---IFQRTPGTTTSQQITFHTKHP----VRFLSISTTGTLC---YGYD 279

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +            + + ++  + D+   R             S  GK     ++ D   
Sbjct: 280 GEIYTLTPGKQPQKVNISILADKNDKDIIRQIKSNGATDI-AVSPKGKEVAFIMRGD--- 335

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   +    T+++TNT     + S++PD   +V+ S+R+G  QLY       ++K+ +
Sbjct: 336 -VYVTSIDYKTTKQITNTPDQERNISFAPDGRTLVYSSERDGLWQLYTSTIVRKEEKQFT 394

Query: 343 QDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---- 388
              E           + F P +SP G  +AF +      AI V+       R +++    
Sbjct: 395 YATELKEERLTNSKVASFQPQFSPDGKEVAFLENRT---AIRVINLKSKAVRTVMDAKYQ 451

Query: 389 ----DSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNE--TLINTPAYASDP 440
               D +     WSP  + ++  F     G     +  +  +G+ E   L  +    S+ 
Sbjct: 452 YSYADGDQWF-QWSPDSQWILSDFI-GIGGWNNKDVVLLKADGKGEMVNLTESGYSDSNA 509

Query: 441 QWV 443
           +WV
Sbjct: 510 KWV 512



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 72/229 (31%), Gaps = 48/229 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V            +I    +    P +S + K+   +  
Sbjct: 30  ALSPDGTTIAFTY--KGDIYTV----PSTGGRATQITTNPAFDTEPVWSPDSKQIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------REGK-E 326
           +  ++D++ V  +  A +RLT             D+  I+F ++            G+ +
Sbjct: 84  RMGSLDVFVVSSEGGAPQRLTTHSGSE-KPVAYKDNKHILFTANIAPSAEDAGFPSGQFQ 142

Query: 327 QLYVMQSNGSDQKRIS--------------------QDKEASYFDPVWSPQGDLIAFTKF 366
           Q+Y +   G      S                    +  E  +     SP    I    +
Sbjct: 143 QVYEVAVTGGRPAMFSSMPMECISINKEGVMLYQDKKGYEDYWRKHQVSPIARDIW--TY 200

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +  K  +         ++        + P WSP G+S  +  ++ G   
Sbjct: 201 TPGKKPVY--------QKQTTFGGEDREPVWSPDGKSFYYLSEEKGSFN 241



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 86/231 (37%), Gaps = 21/231 (9%)

Query: 222 NQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              +  +  +    I R ++          ++   F      P +S +GK      ++  
Sbjct: 179 KGYEDYWRKHQVSPIARDIWTYTPGKKPVYQKQTTFGGEDREPVWSPDGKSFYYLSEEKG 238

Query: 281 AMDIYSVDLQSNATERLTNT-------LFINISAS--YSPDSSQIVFESDREGKEQLYVM 331
           + +I+     +  ++++T         L I+ + +  Y  D    ++      + Q   +
Sbjct: 239 SFNIFQRTPGTTTSQQITFHTKHPVRFLSISTTGTLCYGYDGE--IYTLTPGKQPQKVNI 296

Query: 332 Q--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              ++ +D+  I Q K     D   SP+G  +AF         + V   D    + +   
Sbjct: 297 SILADKNDKDIIRQIKSNGATDIAVSPKGKEVAFIMRGD----VYVTSIDYKTTKQITNT 352

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            + +   +++P GR+L++S ++DG    +LY+  +  + E          +
Sbjct: 353 PDQERNISFAPDGRTLVYSSERDGLW--QLYTSTIVRKEEKQFTYATELKE 401



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 7/101 (6%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSP 399
           I+Q+          SP G  IAFT        I  +   G +  ++    +    P WSP
Sbjct: 18  IAQESPLWMRHCALSPDGTTIAFTYKGD----IYTVPSTGGRATQITTNPAFDTEPVWSP 73

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             + + F+  + G     ++ +   G     + T + +  P
Sbjct: 74  DSKQIAFASDRMGS--LDVFVVSSEGGAPQRLTTHSGSEKP 112



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 45/123 (36%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             +     F+P+FSP+ ++VA+        ++ +     R     K   ++       ++
Sbjct: 404 LTNSKVASFQPQFSPDGKEVAFLENRTAIRVINLKSKAVRTVMDAKYQYSYADGDQWFQW 463

Query: 266 SSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + +  L            D+  +          LT + + + +A +      +++ SD
Sbjct: 464 SPDSQWILSDFIGIGGWNNKDVVLLKADGKGEMVNLTESGYSDSNAKWVLGGKAMIWNSD 523

Query: 322 REG 324
           R G
Sbjct: 524 RAG 526


>gi|160882655|ref|ZP_02063658.1| hypothetical protein BACOVA_00608 [Bacteroides ovatus ATCC 8483]
 gi|156111970|gb|EDO13715.1| hypothetical protein BACOVA_00608 [Bacteroides ovatus ATCC 8483]
          Length = 1094

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 67/203 (33%), Gaps = 29/203 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    IY+V        ++T     +    +SPDS QI F SDR 
Sbjct: 30  ALSPDGTTIAFTYKGD----IYTVPSTGGRATQITTNPAFDTEPVWSPDSKQIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFA 372
           G   ++V+ S G   +R++    +    PV       I FT             SG+   
Sbjct: 86  GSLDVFVVSSEGGTPQRLTTHSGSE--KPVAYKDNKHILFTANIVPSAEDAGFPSGQFQQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---------IFSRKKDGDTGSKLYSIDL 423
           +  +   G +  +      ++  + +  G  L          + + +       +++   
Sbjct: 144 VYEVAVTGGRPAMFSSMP-MECISINKEGVMLYQDKKGYEDYWRKHQVSPIARDIWTYTP 202

Query: 424 NGRN--ETLINTPAYASDPQWVG 444
             +   +          +P W  
Sbjct: 203 GKKPVYQKQTTFGGEDREPVWSP 225



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 56/303 (18%), Positives = 112/303 (36%), Gaps = 42/303 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ EKG FN   +F      +   + +          +R+L+ S    L    +  +
Sbjct: 230 FYYLSEEKGSFN---IFQRTPGTTTSQQITFHTKHP----VRFLSISTTGTLC---YGYD 279

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +            + + ++  + D+   R             S  GK     ++ D   
Sbjct: 280 GEIYTLTPGKQPQKVNISILADKNDKDIIRQIKSNGATDI-AVSPKGKEVAFIMRGD--- 335

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   +    T+++TNT     + S++PD   +V+ S+R+G  QLY       ++K+ +
Sbjct: 336 -VYVTSIDYKTTKQITNTPDQERNISFAPDGRTLVYSSERDGLWQLYTSTIVRKEEKQFT 394

Query: 343 QDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---- 388
              E           + F P +SP G  +AF +      AI V+       R +++    
Sbjct: 395 YATELKEERLTNSKVASFQPQFSPDGKEVAFLENRT---AIRVINLKSKAVRTVMDAKYQ 451

Query: 389 ----DSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNE--TLINTPAYASDP 440
               D +     WSP  + ++  F     G     +  +  +G+ E   L  +    S+ 
Sbjct: 452 YSYADGDQWF-QWSPDSQWILSDFI-GIGGWNNKDVVLLKADGKGEMVNLTESGYSDSNA 509

Query: 441 QWV 443
           +WV
Sbjct: 510 KWV 512



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 71/229 (31%), Gaps = 48/229 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V            +I    +    P +S + K+   +  
Sbjct: 30  ALSPDGTTIAFTY--KGDIYTV----PSTGGRATQITTNPAFDTEPVWSPDSKQIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------REGK-E 326
           +  ++D++ V  +    +RLT             D+  I+F ++            G+ +
Sbjct: 84  RMGSLDVFVVSSEGGTPQRLTTHSGSE-KPVAYKDNKHILFTANIVPSAEDAGFPSGQFQ 142

Query: 327 QLYVMQSNGSDQKRIS--------------------QDKEASYFDPVWSPQGDLIAFTKF 366
           Q+Y +   G      S                    +  E  +     SP    I    +
Sbjct: 143 QVYEVAVTGGRPAMFSSMPMECISINKEGVMLYQDKKGYEDYWRKHQVSPIARDIW--TY 200

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +  K  +         ++        + P WSP G+S  +  ++ G   
Sbjct: 201 TPGKKPVY--------QKQTTFGGEDREPVWSPDGKSFYYLSEEKGSFN 241



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 86/231 (37%), Gaps = 21/231 (9%)

Query: 222 NQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              +  +  +    I R ++          ++   F      P +S +GK      ++  
Sbjct: 179 KGYEDYWRKHQVSPIARDIWTYTPGKKPVYQKQTTFGGEDREPVWSPDGKSFYYLSEEKG 238

Query: 281 AMDIYSVDLQSNATERLTNT-------LFINISAS--YSPDSSQIVFESDREGKEQLYVM 331
           + +I+     +  ++++T         L I+ + +  Y  D    ++      + Q   +
Sbjct: 239 SFNIFQRTPGTTTSQQITFHTKHPVRFLSISTTGTLCYGYDGE--IYTLTPGKQPQKVNI 296

Query: 332 Q--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              ++ +D+  I Q K     D   SP+G  +AF         + V   D    + +   
Sbjct: 297 SILADKNDKDIIRQIKSNGATDIAVSPKGKEVAFIMRGD----VYVTSIDYKTTKQITNT 352

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            + +   +++P GR+L++S ++DG    +LY+  +  + E          +
Sbjct: 353 PDQERNISFAPDGRTLVYSSERDGLW--QLYTSTIVRKEEKQFTYATELKE 401



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 37/101 (36%), Gaps = 7/101 (6%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSP 399
           I+Q+          SP G  IAFT        I  +   G +  ++    +    P WSP
Sbjct: 18  IAQESPLWMRHCALSPDGTTIAFTYKGD----IYTVPSTGGRATQITTNPAFDTEPVWSP 73

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             + + F+  + G     ++ +   G     + T + +  P
Sbjct: 74  DSKQIAFASDRMGS--LDVFVVSSEGGTPQRLTTHSGSEKP 112



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 45/123 (36%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             +     F+P+FSP+ ++VA+        ++ +     R     K   ++       ++
Sbjct: 404 LTNSKVASFQPQFSPDGKEVAFLENRTAIRVINLKSKAVRTVMDAKYQYSYADGDQWFQW 463

Query: 266 SSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + +  L            D+  +          LT + + + +A +      +++ SD
Sbjct: 464 SPDSQWILSDFIGIGGWNNKDVVLLKADGKGEMVNLTESGYSDSNAKWVLGGKAMIWNSD 523

Query: 322 REG 324
           R G
Sbjct: 524 RAG 526


>gi|237718429|ref|ZP_04548910.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229452362|gb|EEO58153.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 1094

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 56/303 (18%), Positives = 112/303 (36%), Gaps = 42/303 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ EKG FN   +F      +   + +          +R+L+ S    L    +  +
Sbjct: 230 FYYLSEEKGSFN---IFQRTPGTTTSQQITFHTKHP----VRFLSISTTGTLC---YGYD 279

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +            + + ++  + D+   R             S  GK     ++ D   
Sbjct: 280 GEIYTLTPGKQPQKVNISILADKNDKDIIRQIKSNGATDI-AVSPKGKEVAFIMRGD--- 335

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   +    T+++TNT     + S++PD   +V+ S+R+G  QLY       ++K+ +
Sbjct: 336 -VYVTSIDYKTTKQITNTPDQERNISFAPDGRTLVYSSERDGLWQLYTSTIVRKEEKQFT 394

Query: 343 QDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---- 388
              E           + F P +SP G  +AF +      AI V+       R +++    
Sbjct: 395 YATELKEERLTNSKVASFQPQFSPDGKEVAFLENRT---AIRVINLKSKAVRTVMDAKYQ 451

Query: 389 ----DSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNE--TLINTPAYASDP 440
               D +     WSP  + ++  F     G     +  +  +G+ E   L  +    S+ 
Sbjct: 452 YSYADGDQWF-QWSPDSQWILSDFI-GIGGWNNKDVVLLKADGKGEMVNLTESGYSDSNA 509

Query: 441 QWV 443
           +WV
Sbjct: 510 KWV 512



 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 67/203 (33%), Gaps = 29/203 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    IY+V        ++T     +    +SPDS QI F SDR 
Sbjct: 30  ALSPDGTTIAFTYKGD----IYTVPSTGGRATQITTNPAFDTEPVWSPDSRQIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFA 372
           G   ++V+ S G   +R++    +    PV       I FT             SG+   
Sbjct: 86  GSLDVFVVSSEGGAPQRLTTHSGSE--KPVAYKDNKHILFTANIAPSAEDAGFPSGQFQQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---------IFSRKKDGDTGSKLYSIDL 423
           +  +   G +  +      ++  + +  G  L          + + +       +++   
Sbjct: 144 VYEVAVTGGRPAMFSSMP-MECISINKEGVMLYQDKKGYEDYWRKHQVSPIARDIWTYTP 202

Query: 424 NGRN--ETLINTPAYASDPQWVG 444
             +   +          +P W  
Sbjct: 203 GKKPVYQKQTTFGGEDREPVWSP 225



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 72/229 (31%), Gaps = 48/229 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V            +I    +    P +S + ++   +  
Sbjct: 30  ALSPDGTTIAFTY--KGDIYTV----PSTGGRATQITTNPAFDTEPVWSPDSRQIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------REGK-E 326
           +  ++D++ V  +  A +RLT             D+  I+F ++            G+ +
Sbjct: 84  RMGSLDVFVVSSEGGAPQRLTTHSGSE-KPVAYKDNKHILFTANIAPSAEDAGFPSGQFQ 142

Query: 327 QLYVMQSNGSDQKRIS--------------------QDKEASYFDPVWSPQGDLIAFTKF 366
           Q+Y +   G      S                    +  E  +     SP    I    +
Sbjct: 143 QVYEVAVTGGRPAMFSSMPMECISINKEGVMLYQDKKGYEDYWRKHQVSPIARDIW--TY 200

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +  K  +         ++        + P WSP G+S  +  ++ G   
Sbjct: 201 TPGKKPVY--------QKQTTFGGEDREPVWSPDGKSFYYLSEEKGSFN 241



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 86/231 (37%), Gaps = 21/231 (9%)

Query: 222 NQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              +  +  +    I R ++          ++   F      P +S +GK      ++  
Sbjct: 179 KGYEDYWRKHQVSPIARDIWTYTPGKKPVYQKQTTFGGEDREPVWSPDGKSFYYLSEEKG 238

Query: 281 AMDIYSVDLQSNATERLTNT-------LFINISAS--YSPDSSQIVFESDREGKEQLYVM 331
           + +I+     +  ++++T         L I+ + +  Y  D    ++      + Q   +
Sbjct: 239 SFNIFQRTPGTTTSQQITFHTKHPVRFLSISTTGTLCYGYDGE--IYTLTPGKQPQKVNI 296

Query: 332 Q--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              ++ +D+  I Q K     D   SP+G  +AF         + V   D    + +   
Sbjct: 297 SILADKNDKDIIRQIKSNGATDIAVSPKGKEVAFIMRGD----VYVTSIDYKTTKQITNT 352

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            + +   +++P GR+L++S ++DG    +LY+  +  + E          +
Sbjct: 353 PDQERNISFAPDGRTLVYSSERDGLW--QLYTSTIVRKEEKQFTYATELKE 401



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 7/101 (6%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSP 399
           I+Q+          SP G  IAFT        I  +   G +  ++    +    P WSP
Sbjct: 18  IAQESPLWMRHCALSPDGTTIAFTYKGD----IYTVPSTGGRATQITTNPAFDTEPVWSP 73

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             R + F+  + G     ++ +   G     + T + +  P
Sbjct: 74  DSRQIAFASDRMGS--LDVFVVSSEGGAPQRLTTHSGSEKP 112



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 45/123 (36%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             +     F+P+FSP+ ++VA+        ++ +     R     K   ++       ++
Sbjct: 404 LTNSKVASFQPQFSPDGKEVAFLENRTAIRVINLKSKAVRTVMDAKYQYSYADGDQWFQW 463

Query: 266 SSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + +  L            D+  +          LT + + + +A +      +++ SD
Sbjct: 464 SPDSQWILSDFIGIGGWNNKDVVLLKADGKGEMVNLTESGYSDSNAKWVLGGKAMIWNSD 523

Query: 322 REG 324
           R G
Sbjct: 524 RAG 526


>gi|145545815|ref|XP_001458591.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426412|emb|CAK91194.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1096

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 74/421 (17%), Positives = 136/421 (32%), Gaps = 70/421 (16%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNP 94
            VK+     N+  + I       I  +G  ++   S +L  S +F+ +          N 
Sbjct: 324 EVKMDIREQNFENIRI-----QDISLIGANMA---SCNLNGS-IFDNVDITGM-----NL 369

Query: 95  DSIPRFQ-DWNSLGAQVL--------VTGRV------IKEGKDRLRVEFRLWDVKDRKQI 139
           +    F   W ++    L            V                  RLWDV   +Q 
Sbjct: 370 NGAQLFNCKWRNIKIHELNKLDGHSSAVRSVCFSPDGTTLASGSYDNSIRLWDVMTGQQK 429

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
              K            H   D I  S+      F+S    ++    SG   NS+ + D  
Sbjct: 430 FELK-----------GH---DGIVYSVC-----FSSDGTILA----SGSDDNSIRLWDTT 466

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
               +      D  +    FSP+   +A A+ D+     + L D R  +   +     S 
Sbjct: 467 TGYQKAKLDGHDDWVISVCFSPDGTTLASASDDN----SIRLWDVRTGQQKLKFDGHTST 522

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVF 318
           + +  FS +G     S   D ++ ++ V  ++   +        I  S  +SPD   I  
Sbjct: 523 VYSVCFSPDGTTLA-SGSHDNSIRLWEV--KTGQQKFEFEGHDGIVYSVCFSPDGKIIAS 579

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD    + + +   N   QK       +  +   +SP G  +A          +  +K 
Sbjct: 580 GSD---DKSIRLWDVNLGQQKAKLDGHNSGIYSICFSPDGATLASGSLDNS-IRLWDIKI 635

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +  + +L    + + +  +S  G  L        D   +L+  ++    +       +AS
Sbjct: 636 EQQKAKLDGHSNYVMSVCFSSDGTKLA---SGSLDNSIRLWDANV---GQQRAQVDGHAS 689

Query: 439 D 439
            
Sbjct: 690 S 690



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/281 (17%), Positives = 102/281 (36%), Gaps = 37/281 (13%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             RLWDV+  +Q             +   HT    +Y       G           ++ S
Sbjct: 501 SIRLWDVRTGQQ-----------KLKFDGHT--STVYSVCFSPDG----------TTLAS 537

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G   NS+ + +      ++     D I++   FSP+ + +A  + D      + L D  +
Sbjct: 538 GSHDNSIRLWEVKTGQQKFEFEGHDGIVYSVCFSPDGKIIASGSDDK----SIRLWDVNL 593

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +   ++    S I +  FS +G     S   D ++ ++ + ++    + L       +S
Sbjct: 594 GQQKAKLDGHNSGIYSICFSPDGATLA-SGSLDNSIRLWDIKIEQQKAK-LDGHSNYVMS 651

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +S D +++   S       + +  +N   Q+       +S +   +SP G  +A    
Sbjct: 652 VCFSSDGTKLASGSL---DNSIRLWDANVGQQRAQVDGHASSVYSVCFSPDGTTLASGSN 708

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
                 I +      Q++  ++  +    +  +SP G +L 
Sbjct: 709 DNS---ICLWDVKTGQQQAKLDGHSNHVLSVCFSPDGTTLA 746



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 52/169 (30%), Gaps = 28/169 (16%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K     L    RLWD    +Q             R      +  +Y       G     
Sbjct: 659 TKLASGSLDNSIRLWDANVGQQ-------------RAQVDGHASSVYSVCFSPDG----- 700

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG   NS+C+ D      +         +    FSP+   +A  + D    
Sbjct: 701 -----TTLASGSNDNSICLWDVKTGQQQAKLDGHSNHVLSVCFSPDGTTLASGSSDK--- 752

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             +   D +  +   ++      I++  FS +G     S   D ++ ++
Sbjct: 753 -SIRFWDVKTGQQKTKLDGHTGYIMSVCFSCDGATLA-SGSIDTSIRLW 799


>gi|297566814|ref|YP_003685786.1| WD40 domain-containing protein beta Propeller [Meiothermus silvanus
           DSM 9946]
 gi|296851263|gb|ADH64278.1| WD40 domain protein beta Propeller [Meiothermus silvanus DSM 9946]
          Length = 881

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 55/309 (17%), Positives = 108/309 (34%), Gaps = 26/309 (8%)

Query: 147 SPASWRKIAHTISD--DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            P + R ++  +S   D+  ++    G     +     + +       +  + + G +  
Sbjct: 233 GPKTLRHLSDGLSAGGDLEAALYAVTGKGLDALYDDFTTWLPQQFAQEIAEIRQAGVSPA 292

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                R      P   P    +AY     E            +   + +      + +P 
Sbjct: 293 QPLTHRGYYAGFPAVGPGG--IAYVHSSPERSGLRLF---SAEGDRELVS---GTLASPS 344

Query: 265 FSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           ++  G+  + S +      D++  +L S    RLT       +ASY+PD       +  +
Sbjct: 345 WAPEGRALVYSKLLASGQRDLFRYELASGRATRLTRGE-RAYAASYAPDGRIFYATNTSD 403

Query: 324 GKEQLYVMQSNGSDQKRI---------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           G  QL V++    + + I            + AS      SP G  +A    + + F   
Sbjct: 404 GSAQLKVLRPGAENGEEIIDFAHPTLPHLPQGASIHSLAVSPDGKRLALVLQTEDGFQNL 463

Query: 375 VMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431
            + +  +    RL  +      P+WSP G+ ++FS   D      LY+  L +G+   + 
Sbjct: 464 YLLELENLRLTRLTQDRYQDSDPSWSPDGQYILFSS--DPKRIYNLYAYRLVDGQFFQVS 521

Query: 432 NTPAYASDP 440
           N  + A  P
Sbjct: 522 NVLSGAFFP 530



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 91/229 (39%), Gaps = 18/229 (7%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +         R L  S+ + SG       +   + A+ R    +R +  +   ++P+  +
Sbjct: 340 LASPSWAPEGRALVYSKLLASGQRD----LFRYELASGRATRLTRGERAYAASYAPDG-R 394

Query: 226 VAYATYDDEDILRVYLMDTRIDR--------APKRIGNFRSMILAP-RFSSNGKRALISV 276
           + YAT   +   ++ ++    +          P      +   +     S +GKR  + +
Sbjct: 395 IFYATNTSDGSAQLKVLRPGAENGEEIIDFAHPTLPHLPQGASIHSLAVSPDGKRLALVL 454

Query: 277 Q-KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           Q +D   ++Y ++L++    RLT   + +   S+SPD   I+F SD +    LY  +   
Sbjct: 455 QTEDGFQNLYLLELENLRLTRLTQDRYQDSDPSWSPDGQYILFSSDPKRIYNLYAYRLVD 514

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
               ++S     ++F  +   QG  + F  +  E + +  M  D S  R
Sbjct: 515 GQFFQVSNVLSGAFFPVM---QGASLVFVGYGSEGYNLYRMPFDLSAWR 560



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 77/230 (33%), Gaps = 21/230 (9%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQKDEAMDIYS 286
           + T+  +   +      +   +P +    R      P     G          E   +  
Sbjct: 269 FTTWLPQQFAQEIAEIRQAGVSPAQPLTHRGYYAGFPAVGPGG--IAYVHSSPERSGLRL 326

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDK 345
              +    E ++ TL    S S++P+   +V+      G+  L+  +       R+++ +
Sbjct: 327 FSAE-GDRELVSGTLA---SPSWAPEGRALVYSKLLASGQRDLFRYELASGRATRLTRGE 382

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK--DGSQERL---------LVEDSNLQA 394
            A  +   ++P G +   T  S     + V++   +  +E +         L + +++ +
Sbjct: 383 RA--YAASYAPDGRIFYATNTSDGSAQLKVLRPGAENGEEIIDFAHPTLPHLPQGASIHS 440

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              SP G+ L    + +    +       N R   L       SDP W  
Sbjct: 441 LAVSPDGKRLALVLQTEDGFQNLYLLELENLRLTRLTQDRYQDSDPSWSP 490


>gi|116191741|ref|XP_001221683.1| hypothetical protein CHGG_05588 [Chaetomium globosum CBS 148.51]
 gi|88181501|gb|EAQ88969.1| hypothetical protein CHGG_05588 [Chaetomium globosum CBS 148.51]
          Length = 1041

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 85/238 (35%), Gaps = 20/238 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           ++         +    FSP+ + +A  ++D      + L D       + +    + + A
Sbjct: 744 LQQTLEGHSDSVMAVAFSPDGKTLASGSHDK----TIRLWDAVTGTLQQTLEGHSNWVTA 799

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
             FS +GK    S  +D+ + ++  D  +   ++ L       +  ++SPD   +   S 
Sbjct: 800 VAFSPDGKTLA-SGSRDKTIRLW--DAVTGTLQQTLEGHSDSVLEVAFSPDGKTLASGSH 856

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               E + +  +     ++  +    S     +SP G  +A          I +      
Sbjct: 857 ---DETIRLWDAVTGTLQQTLEGHSNSVTAVAFSPDGKTLASGSHDKT---IRLWDAVTG 910

Query: 382 QERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             +  +E  +   +A  +SP G++L        D   +L+   + G  +  +   + +
Sbjct: 911 TLQQTLEGHSNSVRAVAFSPDGKTLASGSH---DKTIRLWDA-VTGTLQQTLEGHSDS 964



 Score = 93.5 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 90/253 (35%), Gaps = 20/253 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ SG    ++ + D     ++         +    FSP+ + +A  + D      + L
Sbjct: 765  KTLASGSHDKTIRLWDAVTGTLQQTLEGHSNWVTAVAFSPDGKTLASGSRDK----TIRL 820

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D       + +      +L   FS +GK    S   DE + ++  D  +   ++     
Sbjct: 821  WDAVTGTLQQTLEGHSDSVLEVAFSPDGKTLA-SGSHDETIRLW--DAVTGTLQQTLEGH 877

Query: 302  FINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              +++A ++SPD   +   S     + + +  +     ++  +    S     +SP G  
Sbjct: 878  SNSVTAVAFSPDGKTLASGSH---DKTIRLWDAVTGTLQQTLEGHSNSVRAVAFSPDGKT 934

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKL 418
            +A          I +        +  +E  +       +S  G S + + K  G  G+ L
Sbjct: 935  LASGSHDKT---IRLWDAVTGTLQQTLEGHSDSVLEVAFSLVGNSGLDASKNQGLGGNIL 991

Query: 419  YS----IDLNGRN 427
            +     I   G+N
Sbjct: 992  FIDGEWITTGGKN 1004



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 62/173 (35%), Gaps = 12/173 (6%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           I  V  ++       + +      ++A  FS +GK    S   D+ + ++  D  +   +
Sbjct: 731 IKSVAGINDHWGTLQQTLEGHSDSVMAVAFSPDGKTLA-SGSHDKTIRLW--DAVTGTLQ 787

Query: 296 R-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           + L        + ++SPD   +   S     + + +  +     ++  +    S  +  +
Sbjct: 788 QTLEGHSNWVTAVAFSPDGKTLASGSR---DKTIRLWDAVTGTLQQTLEGHSDSVLEVAF 844

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
           SP G  +A          I +        +  +E  +    A  +SP G++L 
Sbjct: 845 SPDGKTLASGSHDET---IRLWDAVTGTLQQTLEGHSNSVTAVAFSPDGKTLA 894



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 57/180 (31%), Gaps = 30/180 (16%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWD                 + ++     SD + +      G     
Sbjct: 807 KTLASGSRDKTIRLWDAVTG-------------TLQQTLEGHSDSVLEVAFSPDG----- 848

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                +++ SG    ++ + D     ++         +    FSP+ + +A  ++D    
Sbjct: 849 -----KTLASGSHDETIRLWDAVTGTLQQTLEGHSNSVTAVAFSPDGKTLASGSHDK--- 900

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L D       + +    + + A  FS +GK    S   D+ + ++  D  +   ++
Sbjct: 901 -TIRLWDAVTGTLQQTLEGHSNSVRAVAFSPDGKTLA-SGSHDKTIRLW--DAVTGTLQQ 956


>gi|21232747|ref|NP_638664.1| hypothetical protein XCC3318 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767180|ref|YP_241942.1| hypothetical protein XC_0847 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21114563|gb|AAM42588.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572512|gb|AAY47922.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 784

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/235 (19%), Positives = 91/235 (38%), Gaps = 13/235 (5%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               +  +       P  SP+   VAYA+  ++      L+ T  +  P+ +        
Sbjct: 223 RPYQVITAGGGFDLTPSLSPDGAMVAYASLVNDRPGTSILVKTTNNAYPRVLDTPGPGAA 282

Query: 262 A--PRFSSNGKRALISVQK-DEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQI 316
              P +S +G+         D +  I        A   E +       +S S+SPD   +
Sbjct: 283 DRLPAWSPDGRAIAFERDGADGSCRIMIAAANGQAAAHEVVRCDGADMLSFSWSPDGRAL 342

Query: 317 VFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFA 372
           +F +     G  ++  ++      + ++       FD  P +SP G  I F + + +   
Sbjct: 343 LFGTMTGAHGARRIRRLELETGQWQTLAYSAHPDDFDYMPRYSPDGAWIVFMR-NPQMGD 401

Query: 373 IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +  M   G     L +D + ++  +W P    +IF R+ D +  ++LY ++L+ R
Sbjct: 402 LWRMPAQGGTPERLTDDIAEIRGWSWLPDSSGVIFGRRVDSE--ARLYRLELHDR 454



 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 81/230 (35%), Gaps = 16/230 (6%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYS 286
           +      D + V  +     R  + I       L P  S +G      S+  D       
Sbjct: 203 WQHASSTDAVSVGTVVGSPKRPYQVITAGGGFDLTPSLSPDGAMVAYASLVNDRPGTSIL 262

Query: 287 VDLQSNATERLTNTLFI---NISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQK-RI 341
           V   +NA  R+ +T      +   ++SPD   I FE D  +G  ++ +  +NG      +
Sbjct: 263 VKTTNNAYPRVLDTPGPGAADRLPAWSPDGRAIAFERDGADGSCRIMIAAANGQAAAHEV 322

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSN----LQAP 395
            +   A      WSP G  + F   +G      I  ++ +  Q + L   ++       P
Sbjct: 323 VRCDGADMLSFSWSPDGRALLFGTMTGAHGARRIRRLELETGQWQTLAYSAHPDDFDYMP 382

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
            +SP G  ++F R         L+ +    G  E L +  A      W+ 
Sbjct: 383 RYSPDGAWIVFMRN---PQMGDLWRMPAQGGTPERLTDDIAEIRGWSWLP 429



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 85/235 (36%), Gaps = 14/235 (5%)

Query: 218 RFSPNQQKVAYATYDDEDI---LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            +SP+ + + + T         +R   ++T   +      +       PR+S +G   + 
Sbjct: 334 SWSPDGRALLFGTMTGAHGARRIRRLELETGQWQTLAYSAHPDDFDYMPRYSPDGAWIVF 393

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            ++  +  D++ +  Q    ERLT+ +      S+ PDSS ++F    + + +LY ++ +
Sbjct: 394 -MRNPQMGDLWRMPAQGGTPERLTDDIAEIRGWSWLPDSSGVIFGRRVDSEARLYRLELH 452

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGS--QERLLVEDS 390
               + +          P  +  G    F +       + +     +G   + RL   + 
Sbjct: 453 D---RSLHDLGVDDAQAPDVA--GTHAVFVQRKPQFGLYQVVRDPMNGGYLRRRLFPSNG 507

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-WVG 444
               P  +P G+ L+F+  + G  G     +   G    L      +     W  
Sbjct: 508 RDDQPMIAPDGQQLLFTSNRSGAYGLWWGDVTKPGSVRLLEGLRPDSRQAADWSA 562



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 76/176 (43%), Gaps = 21/176 (11%)

Query: 292 NATER----LTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQD 344
            + +R    +T     +++ S SPD + + + S   DR G   L    +N   +   +  
Sbjct: 219 GSPKRPYQVITAGGGFDLTPSLSPDGAMVAYASLVNDRPGTSILVKTTNNAYPRVLDTPG 278

Query: 345 KEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQ---ERLLVEDSNLQAPTWSPS 400
             A+   P WSP G  IAF +  +     I +   +G     E +  + +++ + +WSP 
Sbjct: 279 PGAADRLPAWSPDGRAIAFERDGADGSCRIMIAAANGQAAAHEVVRCDGADMLSFSWSPD 338

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT---------PAYASDPQWVGFM 446
           GR+L+F          ++  ++L  G+ +TL  +         P Y+ D  W+ FM
Sbjct: 339 GRALLFGTMTGAHGARRIRRLELETGQWQTLAYSAHPDDFDYMPRYSPDGAWIVFM 394



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 87/288 (30%), Gaps = 44/288 (15%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDED 235
           +LF + +   G  +     ++         +   D   + PR+SP+   + +       D
Sbjct: 342 LLFGTMTGAHGARRIRRLELETGQWQTLAYSAHPDDFDYMPRYSPDGAWIVFMRNPQMGD 401

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFS----------------------------- 266
           + R+       +R    I   R     P  S                             
Sbjct: 402 LWRMPAQGGTPERLTDDIAEIRGWSWLPDSSGVIFGRRVDSEARLYRLELHDRSLHDLGV 461

Query: 267 -----SN--GKRALISVQKD--EAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQI 316
                 +  G  A+   +K       +    +      R L  +   +     +PD  Q+
Sbjct: 462 DDAQAPDVAGTHAVFVQRKPQFGLYQVVRDPMNGGYLRRRLFPSNGRDDQPMIAPDGQQL 521

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGD--LIAFTKFSGEKFAI 373
           +F S+R G   L+          R+ +  +  S     WS      L+  T  +G +   
Sbjct: 522 LFTSNRSGAYGLWWGDVTKPGSVRLLEGLRPDSRQAADWSADSQHALVTGTDATGRRGIY 581

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
            V   +G   RL V  +      + P   + L+ +   DG T + +Y 
Sbjct: 582 EVTPSNGKVTRLAVPQTRPLQAIYLPDPNQLLVVAASDDGRTSATVYD 629


>gi|150006551|ref|YP_001301295.1| putative exported peptidase [Bacteroides vulgatus ATCC 8482]
 gi|294778830|ref|ZP_06744247.1| WD40-like protein [Bacteroides vulgatus PC510]
 gi|149934975|gb|ABR41673.1| putative exported peptidase [Bacteroides vulgatus ATCC 8482]
 gi|294447283|gb|EFG15866.1| WD40-like protein [Bacteroides vulgatus PC510]
          Length = 1086

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 115/304 (37%), Gaps = 38/304 (12%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  +  ++ EKG FN     + +  + G     +   +     +R+L+ + +  L    +
Sbjct: 228 DKSFYYLSEEKGSFN-----IFKRDIDGNTSKQI--TNHTKHPVRFLSAASNGTLC---Y 277

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
             + +            +++ ++  + D+   R    RS       S + K     ++ D
Sbjct: 278 GYDGEIYTVKEGAIPQKVQISIVTDKNDKDLIRQIK-RSGATEISLSPDAKEIAFVLRGD 336

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               +Y    + + T+++TNT        +SPD   IV+ ++R G  Q+Y       ++K
Sbjct: 337 ----VYVTSTEYSTTKQITNTPQQERDIHFSPDGRSIVYAAERNGLWQIYQTSLAKKEEK 392

Query: 340 RISQ----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           + +           + + + F P +SP G  +AF +       I V+       R +++ 
Sbjct: 393 QFAYATDIKEERLTNSDITSFQPQYSPDGKEVAFLENRTT---IRVLNLKSKAVRTVMDG 449

Query: 390 SNLQAPT-------WSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASD 439
               + +       WSP  + ++ +    G   +K   L +   NG    L  +     +
Sbjct: 450 KYEYSYSDGDQWYQWSPDSKWILTNYIGIGGWNNKDVALVNASGNGEIHNLTESGYSDGN 509

Query: 440 PQWV 443
            +WV
Sbjct: 510 AKWV 513



 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 66/202 (32%), Gaps = 30/202 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    IY+V        ++T     +    +SPD  +I F SDR 
Sbjct: 30  AISPDGTTIAFTYKGD----IYTVPSTGGRASQITTNPAHDTKPIWSPDGKKIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKF-A 372
           G   ++ +   G   KR++         PV       I F           +F   +F  
Sbjct: 86  GSMDIFEVNKEGGIPKRLTTHSGNE--TPVAYKDAGHILFLANIMPTAEDAQFPSGQFQQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF----------SRKKDGDTGSKLYSID 422
           +  +  +G +  +L     ++  + + +G +L++           +         ++   
Sbjct: 144 VYEVNTEGGRP-ILFSSMPMEDISINHTGNTLLYHDKKGYEDPWRKHHTSSITRDIWLCS 202

Query: 423 LNG--RNETLINTPAYASDPQW 442
           LNG                P W
Sbjct: 203 LNGNRTFRKQTAFNGEDRTPVW 224



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 84/240 (35%), Gaps = 37/240 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V            +I    +    P +S +GK+   +  
Sbjct: 30  AISPDGTTIAFTY--KGDIYTV----PSTGGRASQITTNPAHDTKPIWSPDGKKIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------REGK-E 326
           +  +MDI+ V+ +    +RLT         +Y  D+  I+F ++            G+ +
Sbjct: 84  RMGSMDIFEVNKEGGIPKRLTTHSGNETPVAY-KDAGHILFLANIMPTAEDAQFPSGQFQ 142

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIG 374
           Q+Y + + G      S        D   +  G+ + +               S     I 
Sbjct: 143 QVYEVNTEGGRPILFSSMP---MEDISINHTGNTLLYHDKKGYEDPWRKHHTSSITRDIW 199

Query: 375 VMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +   +G++   +    +   + P W+   +S  +  ++ G     ++  D++G     I 
Sbjct: 200 LCSLNGNRTFRKQTAFNGEDRTPVWASDDKSFYYLSEEKGSF--NIFKRDIDGNTSKQIT 257



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSG 401
           QD          SP G  IAFT        I  +   G +  ++    ++   P WSP G
Sbjct: 20  QDNPLWMRYCAISPDGTTIAFTYKGD----IYTVPSTGGRASQITTNPAHDTKPIWSPDG 75

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + + F+  + G     ++ ++  G     + T +    P
Sbjct: 76  KKIAFASDRMGSM--DIFEVNKEGGIPKRLTTHSGNETP 112



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 71/231 (30%), Gaps = 73/231 (31%)

Query: 281 AMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             DI+   L  N T R  T     + +  ++ D     + S+ +G   ++    +G+  K
Sbjct: 195 TRDIWLCSLNGNRTFRKQTAFNGEDRTPVWASDDKSFYYLSEEKGSFNIFKRDIDGNTSK 254

Query: 340 RIS-----------------------------------------------------QDKE 346
           +I+                                                     Q K 
Sbjct: 255 QITNHTKHPVRFLSAASNGTLCYGYDGEIYTVKEGAIPQKVQISIVTDKNDKDLIRQIKR 314

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLI 405
           +   +   SP    IAF         + V   + S  + +      +    +SP GRS++
Sbjct: 315 SGATEISLSPDAKEIAFVLRGD----VYVTSTEYSTTKQITNTPQQERDIHFSPDGRSIV 370

Query: 406 FSRKKDGDTGSKLYSIDL------------NGRNETLINTPAYASDPQWVG 444
           ++ +++G    ++Y   L            + + E L N+   +  PQ+  
Sbjct: 371 YAAERNGLW--QIYQTSLAKKEEKQFAYATDIKEERLTNSDITSFQPQYSP 419



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 77/234 (32%), Gaps = 29/234 (12%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    + ++   K  +  +   G     +T +      +P +SP+ +K+A+A+      +
Sbjct: 31  ISPDGTTIAFTYKGDIYTVPSTGGRASQITTNPAH-DTKPIWSPDGKKIAFASDRMGS-M 88

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----------VQKDEAMDIYSV 287
            ++ ++ +    PKR+           +   G    ++              +   +Y V
Sbjct: 89  DIFEVN-KEGGIPKRLTTHSGNETPVAYKDAGHILFLANIMPTAEDAQFPSGQFQQVYEV 147

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-------------KEQLYVMQSN 334
           + +       ++    +IS   +   + +++  D++G                +++   N
Sbjct: 148 NTEGGRPILFSSMPMEDIS--INHTGNTLLYH-DKKGYEDPWRKHHTSSITRDIWLCSLN 204

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           G+   R           PVW+       +       F I     DG+  + +  
Sbjct: 205 GNRTFRKQTAFNGEDRTPVWASDDKSFYYLSEEKGSFNIFKRDIDGNTSKQITN 258



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 63/154 (40%), Gaps = 16/154 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             + D   F+P++SP+ ++VA+        +L +     R     K   ++       ++
Sbjct: 405 LTNSDITSFQPQYSPDGKEVAFLENRTTIRVLNLKSKAVRTVMDGKYEYSYSDGDQWYQW 464

Query: 266 SSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + K  L +          D+  V+         LT + + + +A +  D   +++ESD
Sbjct: 465 SPDSKWILTNYIGIGGWNNKDVALVNASGNGEIHNLTESGYSDGNAKWVLDGKAMIWESD 524

Query: 322 REG---------KEQLYVM--QSNGSDQKRISQD 344
           R G         +  +Y+M    +  D+ R+S++
Sbjct: 525 RAGFRSHGSWGAEADIYIMFFDLDAYDRFRMSKE 558



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 23/64 (35%), Gaps = 13/64 (20%)

Query: 388 EDSNLQAPTW------SPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASDP 440
                  P W      SP G ++ F+ K        +Y++    GR   +   PA+ + P
Sbjct: 16  STYAQDNPLWMRYCAISPDGTTIAFTYK------GDIYTVPSTGGRASQITTNPAHDTKP 69

Query: 441 QWVG 444
            W  
Sbjct: 70  IWSP 73


>gi|21227779|ref|NP_633701.1| hypothetical protein MM_1677 [Methanosarcina mazei Go1]
 gi|20906184|gb|AAM31373.1| conserved protein [Methanosarcina mazei Go1]
          Length = 1063

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 87/227 (38%), Gaps = 18/227 (7%)

Query: 212 QILFEPRFSPN----QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           QI   P +  +      ++ +  Y +  I ++Y+ +       + +    S    PR   
Sbjct: 20  QITNNPSWKEDPVIYGDRIVWVDYREGKI-QIYMYNLSTSNETQVVTTS-SRQEDPRIY- 76

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            G R +    +++  +IY  DL ++   ++T         +   D  +IV+  DR G + 
Sbjct: 77  -GNRIIWVDNRNDDYNIYMYDLLTSKETQITTNKSDQYFPAIYED--KIVWTDDRNGNQD 133

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y+   + S + +I+ +  +     ++   GD I +       + I +     S+   + 
Sbjct: 134 IYMYDLSNSKETQITTNGSSQALPAIY---GDKIVWQDQRNGNWDIYMYDLSNSKGSQIT 190

Query: 388 EDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +   Q    SP      + +  ++     + +Y  D++   ET + 
Sbjct: 191 TNELDQH---SPDVYKDRIFWEDERSSQIFNDIYMYDISTSTETQMA 234



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 61/167 (36%), Gaps = 18/167 (10%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +   D  + +           ++TN               +IV+   REGK Q+Y+  
Sbjct: 5   AFAESADGQLTL--------VETQITNNPSWKEDPVIY--GDRIVWVDYREGKIQIYMYN 54

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSN 391
            + S++ ++           ++   G+ I +     + + I +     S+E ++    S+
Sbjct: 55  LSTSNETQVVTTSSRQEDPRIY---GNRIIWVDNRNDDYNIYMYDLLTSKETQITTNKSD 111

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
              P        ++++  ++G     +Y  DL+   ET I T   + 
Sbjct: 112 QYFPAIYED--KIVWTDDRNG--NQDIYMYDLSNSKETQITTNGSSQ 154



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/292 (12%), Positives = 95/292 (32%), Gaps = 57/292 (19%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +  RI++V         K  + + +   +N   +  +  +   +PR      ++ +   
Sbjct: 33  IYGDRIVWVDYR----EGKIQIYMYNLSTSNETQVVTTSSR-QEDPRIY--GNRIIWVDN 85

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            ++D   +Y+ D    +  + I   +S    P    +  + + +  ++   DIY  DL +
Sbjct: 86  RNDD-YNIYMYDLLTSKETQ-ITTNKSDQYFPAIYED--KIVWTDDRNGNQDIYMYDLSN 141

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           +   ++T         +      +IV++  R G   +Y+   + S   +I+ ++   +  
Sbjct: 142 SKETQITTNGSSQALPAIY--GDKIVWQDQRNGNWDIYMYDLSNSKGSQITTNELDQHSP 199

Query: 352 PVWSPQ-----------------------------------------GDLIAFTKFSGEK 370
            V+  +                                          + I +       
Sbjct: 200 DVYKDRIFWEDERSSQIFNDIYMYDISTSTETQMAASKSIKTYYDIYENRIVWQDERNGN 259

Query: 371 FAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             I +     S E ++    S+   P     G  +++   ++G+    + +I
Sbjct: 260 QDIYMYDLSTSNETQITTNGSSQLKPAI--YGNRIVWQDSRNGNYEIYICTI 309



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 77/231 (33%), Gaps = 29/231 (12%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+  KV YA     + + V    T    A   +G      L    S +GK+  ++    +
Sbjct: 479 PDGTKV-YAANYGSNNVSVIDTSTNTVTATVPVGVTP---LGVAVSPDGKKVYVANYNSD 534

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIV------FESDREGKEQL--- 328
              I  +D  +N   ++T+T+ +       + +PD +++       F S+   +  +   
Sbjct: 535 N--ISVIDAATN---KITDTVNVGDFPVGIAVNPDGTKVYVANINPFGSEMNYERMIGTV 589

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLV 387
            V+ +  ++     +  E S      +P G  +    +      + V+     +   ++ 
Sbjct: 590 SVINATTNNVTATVKIGE-SPSGIAVNPTGTKVYVANY--GSSNVSVIDTSTNTVMSIIS 646

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             +       +  G  + +   +  +  S    ID    N         + 
Sbjct: 647 VGNRPYGVAVNSDGTKV-YVANQGSNNVS---IIDTTTNNVIGTVNVGNSP 693


>gi|293371423|ref|ZP_06617854.1| WD40-like protein [Bacteroides ovatus SD CMC 3f]
 gi|292633620|gb|EFF52178.1| WD40-like protein [Bacteroides ovatus SD CMC 3f]
          Length = 1094

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 67/203 (33%), Gaps = 29/203 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     + + D    IY+V        ++T     +    +SPDS QI F SDR 
Sbjct: 30  ALSPDGTTIAFTYKGD----IYTVPSTGGRATQITTNPAFDTEPVWSPDSRQIAFASDRM 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFA 372
           G   ++V+ S G   +R++    +    PV       I FT             SG+   
Sbjct: 86  GSLDVFVVSSEGGAPQRLTTHSGSE--KPVAYKDNKHILFTANIAPSAEDAGFPSGQFQQ 143

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---------IFSRKKDGDTGSKLYSIDL 423
           +  +   G +  +      ++  + +  G  L          + + +       +++   
Sbjct: 144 VYEVAVTGGRPAMFSSMP-MECISINKEGVMLYQDKKGYEDYWRKHQVSPIARDIWTYTP 202

Query: 424 NGRN--ETLINTPAYASDPQWVG 444
             +   +          +P W  
Sbjct: 203 GKKPVYQKQTTFGGEDREPVWSP 225



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 56/303 (18%), Positives = 112/303 (36%), Gaps = 42/303 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ EKG FN   +F      +   + +          +R+L+ S    L    +  +
Sbjct: 230 FYYLSEEKGSFN---IFQRTPGTTTSQQITFHTKHP----VRFLSISTTGTLC---YGYD 279

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +            + + ++  + D+   R             S  GK     ++ D   
Sbjct: 280 GEIYTLTPGKQPQKVNISILADKNDKDIIRQIKSNGATDI-AVSPKGKEVAFIMRGD--- 335

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y   +    T+++TNT     + S++PD   +V+ S+R+G  QLY       ++K+ +
Sbjct: 336 -VYVTSIDYKTTKQITNTPDQERNISFAPDGRTLVYSSERDGLWQLYTSTIVRKEEKQFT 394

Query: 343 QDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---- 388
              E           + F P +SP G  +AF +      AI V+       R +++    
Sbjct: 395 YATELKEERLTNSKVASFQPQFSPDGKEVAFLENRT---AIRVINLKNKAVRTVMDAKYQ 451

Query: 389 ----DSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNE--TLINTPAYASDP 440
               D +     WSP  + ++  F     G     +  +  +G+ E   L  +    S+ 
Sbjct: 452 YSYADGDQWF-QWSPDSQWILSDFI-GIGGWNNKDVVLLKADGKGEMVNLTESGYSDSNA 509

Query: 441 QWV 443
           +WV
Sbjct: 510 KWV 512



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 72/229 (31%), Gaps = 48/229 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A+      DI  V            +I    +    P +S + ++   +  
Sbjct: 30  ALSPDGTTIAFTY--KGDIYTV----PSTGGRATQITTNPAFDTEPVWSPDSRQIAFASD 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------REGK-E 326
           +  ++D++ V  +  A +RLT             D+  I+F ++            G+ +
Sbjct: 84  RMGSLDVFVVSSEGGAPQRLTTHSGSE-KPVAYKDNKHILFTANIAPSAEDAGFPSGQFQ 142

Query: 327 QLYVMQSNGSDQKRIS--------------------QDKEASYFDPVWSPQGDLIAFTKF 366
           Q+Y +   G      S                    +  E  +     SP    I    +
Sbjct: 143 QVYEVAVTGGRPAMFSSMPMECISINKEGVMLYQDKKGYEDYWRKHQVSPIARDIW--TY 200

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +  K  +         ++        + P WSP G+S  +  ++ G   
Sbjct: 201 TPGKKPVY--------QKQTTFGGEDREPVWSPDGKSFYYLSEEKGSFN 241



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 86/231 (37%), Gaps = 21/231 (9%)

Query: 222 NQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              +  +  +    I R ++          ++   F      P +S +GK      ++  
Sbjct: 179 KGYEDYWRKHQVSPIARDIWTYTPGKKPVYQKQTTFGGEDREPVWSPDGKSFYYLSEEKG 238

Query: 281 AMDIYSVDLQSNATERLTNT-------LFINISAS--YSPDSSQIVFESDREGKEQLYVM 331
           + +I+     +  ++++T         L I+ + +  Y  D    ++      + Q   +
Sbjct: 239 SFNIFQRTPGTTTSQQITFHTKHPVRFLSISTTGTLCYGYDGE--IYTLTPGKQPQKVNI 296

Query: 332 Q--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              ++ +D+  I Q K     D   SP+G  +AF         + V   D    + +   
Sbjct: 297 SILADKNDKDIIRQIKSNGATDIAVSPKGKEVAFIMRGD----VYVTSIDYKTTKQITNT 352

Query: 390 SNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            + +   +++P GR+L++S ++DG    +LY+  +  + E          +
Sbjct: 353 PDQERNISFAPDGRTLVYSSERDGLW--QLYTSTIVRKEEKQFTYATELKE 401



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 7/101 (6%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSP 399
           I+Q+          SP G  IAFT        I  +   G +  ++    +    P WSP
Sbjct: 18  IAQESPLWMRHCALSPDGTTIAFTYKGD----IYTVPSTGGRATQITTNPAFDTEPVWSP 73

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             R + F+  + G     ++ +   G     + T + +  P
Sbjct: 74  DSRQIAFASDRMGS--LDVFVVSSEGGAPQRLTTHSGSEKP 112



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 45/123 (36%), Gaps = 5/123 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             +     F+P+FSP+ ++VA+        ++ +     R     K   ++       ++
Sbjct: 404 LTNSKVASFQPQFSPDGKEVAFLENRTAIRVINLKNKAVRTVMDAKYQYSYADGDQWFQW 463

Query: 266 SSNGKRALISVQKDEAM---DIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           S + +  L            D+  +          LT + + + +A +      +++ SD
Sbjct: 464 SPDSQWILSDFIGIGGWNNKDVVLLKADGKGEMVNLTESGYSDSNAKWVLGGKAMIWNSD 523

Query: 322 REG 324
           R G
Sbjct: 524 RAG 526


>gi|254412947|ref|ZP_05026719.1| RHS Repeat family [Microcoleus chthonoplastes PCC 7420]
 gi|196180111|gb|EDX75103.1| RHS Repeat family [Microcoleus chthonoplastes PCC 7420]
          Length = 1434

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 53/280 (18%), Positives = 112/280 (40%), Gaps = 27/280 (9%)

Query: 135  DRKQIIGKKFFSSPASWRK---IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
            D K I    +  +   W +   + HT+S         E+G  +       +++ S  +  
Sbjct: 806  DGKTIASASWDKTVRLWNREGELLHTLS-------GHEEGVRSVVFSPDGKTIASASLDK 858

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            ++ + +R+G  +  L+   D ++    FSP+ + +A A++D    +R++    R      
Sbjct: 859  TVRLWNREGEPLHILSGHEDSVISV-AFSPDGKTIASASWD--KTVRLW---NREGELLH 912

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             +      + +  FS +GK    S   D  + ++  + +      L+       S  +SP
Sbjct: 913  TLSGHEEWVYSVVFSPDGKTIA-SASDDGTVRLW--NREGELLHTLSGHEEWVYSVVFSP 969

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            D   I   SD +G  +L+     G     +S  +E      V+SP G  IA   +     
Sbjct: 970  DGKTIASASD-DGTVRLW--NREGELLHTLSGHEEG-VRSVVFSPDGKTIASASWDKT-- 1023

Query: 372  AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKK 410
             + +  ++G    +L   +  +++  +SP G ++  +  K
Sbjct: 1024 -VRLWNREGEPLHILSGHEEGVRSVVFSPDGNTIASASDK 1062



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 51/290 (17%), Positives = 115/290 (39%), Gaps = 24/290 (8%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG------DFNSRILF-VSE 182
           L +     +++ K    +    R+I+ T+   IY+    E+       ++ + ++F    
Sbjct: 708 LIEGIRAGELLKKSNPENSEIKRRISQTLQTVIYEDRFRERNRLMGHEEWVNSVVFSPDG 767

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           + ++     ++ + +RDG  +  L+     +     FSP+ + +A A++D    +R++  
Sbjct: 768 NTIASASYKTVRLWNRDGELLHTLSGHEKGVNSV-VFSPDGKTIASASWD--KTVRLW-- 822

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             R       +      + +  FS +GK    S   D+ + ++  + +      L+    
Sbjct: 823 -NREGELLHTLSGHEEGVRSVVFSPDGKTIA-SASLDKTVRLW--NREGEPLHILSGHED 878

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             IS ++SPD   I   S     + + +    G     +S  +E  Y   V+SP G  IA
Sbjct: 879 SVISVAFSPDGKTIASAS---WDKTVRLWNREGELLHTLSGHEEWVYSV-VFSPDGKTIA 934

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
                G    + +  ++G     L   +  + +  +SP G+++  +    
Sbjct: 935 SASDDGT---VRLWNREGELLHTLSGHEEWVYSVVFSPDGKTIASASDDG 981



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 110/295 (37%), Gaps = 36/295 (12%)

Query: 135  DRKQIIGKKFFSSPASWRK---IAHTIS---DDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D K I       +   W +   + HT+S   D +        G          +++ S  
Sbjct: 1092 DGKTIASASLDKTVRLWNREGELLHTLSGHEDSVISVAFSPDG----------KTIASAS 1141

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               +L + +RDG  +  L+   + ++F   FSP+   +A A+ D    +R++    R   
Sbjct: 1142 EDKTLRLWNRDGELLHTLS-GHEDLVFSVVFSPDGNTIASASED--KTVRLW---NREGE 1195

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                +      + +  FS +G     S   D+ + ++  + +      L+          
Sbjct: 1196 LLHILSGHEETVWSVVFSPDGNTIA-SASGDKTLRLW--NREGELLHTLSGHEDEVYDVV 1252

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPD   I   S     + + +   +G     +S   E      V+SP G+ IA     G
Sbjct: 1253 FSPDGKTIASAS---WDKTVRLWNRDGELLHTLS-GHEDLVRSVVFSPDGNTIASASRDG 1308

Query: 369  EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                + +  ++G     L   + +L +  +SP G+++  +     D   +L++ D
Sbjct: 1309 T---VKLWNREGELLHTLSGHEESLISVVFSPDGKTIASASD---DKTVRLWNRD 1357



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 102/256 (39%), Gaps = 21/256 (8%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             E+G   S +     + ++     ++ + +RDG  +  L+     +     FSP+ + +A
Sbjct: 1040 HEEGV-RSVVFSPDGNTIASASDKTVRLWNRDGELLHTLSGHEAGVNSV-VFSPDGKTIA 1097

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A+ D    +R++    R       +      +++  FS +GK    S  +D+ + ++  
Sbjct: 1098 SASLD--KTVRLW---NREGELLHTLSGHEDSVISVAFSPDGKTIA-SASEDKTLRLW-- 1149

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +        L+    +  S  +SPD + I   S+    ++   + +   +   I    E 
Sbjct: 1150 NRDGELLHTLSGHEDLVFSVVFSPDGNTIASASE----DKTVRLWNREGELLHILSGHEE 1205

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIF 406
            + +  V+SP G+ IA          + +  ++G     L    + +    +SP G+++  
Sbjct: 1206 TVWSVVFSPDGNTIASAS---GDKTLRLWNREGELLHTLSGHEDEVYDVVFSPDGKTIAS 1262

Query: 407  SRKKDGDTGSKLYSID 422
            +     D   +L++ D
Sbjct: 1263 ASW---DKTVRLWNRD 1275



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 103/260 (39%), Gaps = 30/260 (11%)

Query: 153  KIAHTIS---DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            ++ HT+S   D ++  +    G           ++ S     ++ + +R+G  + ++   
Sbjct: 1154 ELLHTLSGHEDLVFSVVFSPDG----------NTIASASEDKTVRLWNREGE-LLHILSG 1202

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             ++ ++   FSP+   +A A+ D    LR++    R       +      +    FS +G
Sbjct: 1203 HEETVWSVVFSPDGNTIASASGD--KTLRLW---NREGELLHTLSGHEDEVYDVVFSPDG 1257

Query: 270  KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            K    S   D+ + ++  +        L+    +  S  +SPD + I   S R+G  +L+
Sbjct: 1258 KTIA-SASWDKTVRLW--NRDGELLHTLSGHEDLVRSVVFSPDGNTIASAS-RDGTVKLW 1313

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-E 388
                 G     +S   E S    V+SP G  IA          + +  +DG    +L   
Sbjct: 1314 --NREGELLHTLS-GHEESLISVVFSPDGKTIASASDDKT---VRLWNRDGELLHILSGH 1367

Query: 389  DSNLQAPTWSPSGRSLIFSR 408
            + ++ +  +SP G ++  + 
Sbjct: 1368 EYSVFSVVFSPDGNTIASAS 1387



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 103/292 (35%), Gaps = 37/292 (12%)

Query: 135  DRKQIIGKKFFSSPASWRK---IAHTIS---DDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D K I       +   W +   + HT+S   + +Y  +    G          +++ S  
Sbjct: 929  DGKTIASASDDGTVRLWNREGELLHTLSGHEEWVYSVVFSPDG----------KTIASAS 978

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               ++ + +R+G  +  L+   + +     FSP+ + +A A++D    +R++    R   
Sbjct: 979  DDGTVRLWNREGELLHTLSGHEEGVRSV-VFSPDGKTIASASWD--KTVRLW---NREGE 1032

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                +      + +  FS +G     +  K   +     +        L+       S  
Sbjct: 1033 PLHILSGHEEGVRSVVFSPDGNTIASASDKTVRLW----NRDGELLHTLSGHEAGVNSVV 1088

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPD   I   S     + + +    G     +S   E S     +SP G  IA      
Sbjct: 1089 FSPDGKTIASASL---DKTVRLWNREGELLHTLS-GHEDSVISVAFSPDGKTIASASEDK 1144

Query: 369  EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                + +  +DG     L   +  + +  +SP G ++  + +   D   +L+
Sbjct: 1145 T---LRLWNRDGELLHTLSGHEDLVFSVVFSPDGNTIASASE---DKTVRLW 1190



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 80/186 (43%), Gaps = 13/186 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++ S     +L + +R+G  +  L+   D++ ++  FSP+ + +A A++D    +R++ 
Sbjct: 1217 NTIASASGDKTLRLWNREGELLHTLSGHEDEV-YDVVFSPDGKTIASASWD--KTVRLWN 1273

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D  +      +     ++ +  FS +G     S  +D  + ++  + +      L+   
Sbjct: 1274 RDGELLHT---LSGHEDLVRSVVFSPDGNTIA-SASRDGTVKLW--NREGELLHTLSGHE 1327

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               IS  +SPD   I   SD    + + +   +G +   I    E S F  V+SP G+ I
Sbjct: 1328 ESLISVVFSPDGKTIASASD---DKTVRLWNRDG-ELLHILSGHEYSVFSVVFSPDGNTI 1383

Query: 362  AFTKFS 367
            A     
Sbjct: 1384 ASASLD 1389


>gi|189211806|ref|XP_001942231.1| vegetative incompatibility protein HET-E-1 [Pyrenophora
            tritici-repentis Pt-1C-BFP]
 gi|187979430|gb|EDU46056.1| vegetative incompatibility protein HET-E-1 [Pyrenophora
            tritici-repentis Pt-1C-BFP]
          Length = 1111

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 56/355 (15%), Positives = 118/355 (33%), Gaps = 51/355 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISDDIYQSITG-- 168
            G+++    D   V  RLWDV        + G     +  ++      ++   Y       
Sbjct: 757  GQLVASASDDNTV--RLWDVLAGTCRGTLEGHSNTITAVTFSPDGQLVASASYDKTVRLW 814

Query: 169  ------------EKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                            F   ++F  +   V S     ++ + +      R         +
Sbjct: 815  EASTGTCRSTLEGHSSFIETVVFSPDGQLVASASTDKTVRLWEAATGTCRSTLEGHSDWV 874

Query: 215  FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
                FSP+ Q VA A+ D      V L +         + +    + A  FS +G + + 
Sbjct: 875  GAVAFSPDGQLVASASRDK----TVRLWEAATGMCHSTLESHSGWVSAVAFSPDG-QLVA 929

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            S   D+ + ++            TN   + +  ++SPD   +   SD      + + ++ 
Sbjct: 930  SASMDKTVRLWKAGT--------TNDETVQLDVAFSPDGQLVASVSD---DYIVRLWKAA 978

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNL 392
                +   +    +     +SP G L+A   +      + + +      R  +E   S +
Sbjct: 979  TGTCRSTLEGHSNTITAVTFSPDGQLVASASYDKT---VRLWEASTGTCRSTLEGHSSFI 1035

Query: 393  QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQ 441
            +   +SP G+ +  +     D   +L+ + +     TL      +   A++ D Q
Sbjct: 1036 ETVVFSPDGQLVASAST---DKTVRLWDVPVRTCRSTLEGHSDAVTAVAFSPDGQ 1087



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 90/274 (32%), Gaps = 21/274 (7%)

Query: 136 RKQIIGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV---SGIIKN 191
            + +I + F    P   + ++   +D      T E      R +  S +     S    N
Sbjct: 708 ERSLIRRTFVDQVPQRVKMLSMKEADWDACRSTLEGHSSRVRAVAFSPNGQLVASASDDN 767

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++ + D      R         +    FSP+ Q VA A+YD      V L +        
Sbjct: 768 TVRLWDVLAGTCRGTLEGHSNTITAVTFSPDGQLVASASYDK----TVRLWEASTGTCRS 823

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +    S I    FS +G + + S   D+ + ++           L        + ++SP
Sbjct: 824 TLEGHSSFIETVVFSPDG-QLVASASTDKTVRLWEA-ATGTCRSTLEGHSDWVGAVAFSP 881

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D  Q+V  + R+   +L+  ++         +          +SP G L+A      +  
Sbjct: 882 DG-QLVASASRDKTVRLW--EAATGMCHSTLESHSGWVSAVAFSPDGQLVASASMD-KTV 937

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +        +   L          +SP G+ + 
Sbjct: 938 RLWKAGTTNDETVQL-------DVAFSPDGQLVA 964



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 10/168 (5%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            T + + +  +  FSP+ Q VA  + D      V L           +    + I A  FS
Sbjct: 944  TTNDETVQLDVAFSPDGQLVASVSDD----YIVRLWKAATGTCRSTLEGHSNTITAVTFS 999

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             +G + + S   D+ + ++     +  +    ++ FI     +SPD   +   S     +
Sbjct: 1000 PDG-QLVASASYDKTVRLWEASTGTCRSTLEGHSSFIETV-VFSPDGQLVASAST---DK 1054

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             + +        +   +    +     +SP G L+A +    E   + 
Sbjct: 1055 TVRLWDVPVRTCRSTLEGHSDAVTAVAFSPDGQLVA-SASDDETIRLW 1101



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 6/138 (4%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V S      + +        R         +    FSP+ Q VA A+YD      V L +
Sbjct: 963  VASVSDDYIVRLWKAATGTCRSTLEGHSNTITAVTFSPDGQLVASASYDK----TVRLWE 1018

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                     +    S I    FS +G + + S   D+ + ++ V +++  +  L      
Sbjct: 1019 ASTGTCRSTLEGHSSFIETVVFSPDG-QLVASASTDKTVRLWDVPVRTCRST-LEGHSDA 1076

Query: 304  NISASYSPDSSQIVFESD 321
              + ++SPD   +   SD
Sbjct: 1077 VTAVAFSPDGQLVASASD 1094



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 38/104 (36%), Gaps = 5/104 (4%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V S     ++ + +      R         +    FSP+ Q VA A+ D      V L D
Sbjct: 1005 VASASYDKTVRLWEASTGTCRSTLEGHSSFIETVVFSPDGQLVASASTDK----TVRLWD 1060

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              +      +      + A  FS +G + + S   DE + ++ +
Sbjct: 1061 VPVRTCRSTLEGHSDAVTAVAFSPDG-QLVASASDDETIRLWEL 1103



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 11/114 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SP+   +   SD      + +        +   +    +     +SP G L+A   + 
Sbjct: 752 AFSPNGQLVASASD---DNTVRLWDVLAGTCRGTLEGHSNTITAVTFSPDGQLVASASYD 808

Query: 368 GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                + + +      R  +E   S ++   +SP G+ +  +     D   +L+
Sbjct: 809 KT---VRLWEASTGTCRSTLEGHSSFIETVVFSPDGQLVASAST---DKTVRLW 856


>gi|116625897|ref|YP_828053.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229059|gb|ABJ87768.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 912

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 79/221 (35%), Gaps = 12/221 (5%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           F P  +     +A A++    +        +     +   + R     P  S +GK    
Sbjct: 308 FWPALAGTCVLIAVASFAFAWLNHRAGASPQGPDLVRLSPDDRHSYSDPTISPDGKFVAF 367

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQLYVM 331
             ++     ++   +      +LT++     SAS+ PD ++IV+    SDR     + V+
Sbjct: 368 ISERSGRRQLWLQQVGGGEPIQLTHSNETVSSASFFPDGTRIVYSTASSDRRRTSTIEVI 427

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--- 388
            + G   + +    +  +     SP G  I +         + ++  DG   R L     
Sbjct: 428 PTLGGQSRSLLNGTD--FGGVALSPDGQRIVYVDSGQPSPRLMIISSDGGPPRELANWER 485

Query: 389 ---DSNLQAPTWSPSGRSLIFS-RKKDGDTGSKLYSIDLNG 425
                 ++   W+   R ++ +  K+        +++ ++G
Sbjct: 486 TQSQFKIEQAIWTSDSRWVLCTGSKRTQPDEWDWFAVPVDG 526



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 13/197 (6%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G ++  L+P       +P  SP+ + VA+ +       R   +       P ++ +    
Sbjct: 339 GPDLVRLSPDDRHSYSDPTISPDGKFVAFISERSGR--RQLWLQQVGGGEPIQLTHSNET 396

Query: 260 ILAPRFSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           + +  F  +G R +    S  +     I  +      +  L N        + SPD  +I
Sbjct: 397 VSSASFFPDGTRIVYSTASSDRRRTSTIEVIPTLGGQSRSLLNGTDF-GGVALSPDGQRI 455

Query: 317 VFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYF---DPVWSPQGDLIAFT---KFSGE 369
           V+    +   +L ++ S+G   + ++  ++  S F     +W+     +  T   +   +
Sbjct: 456 VYVDSGQPSPRLMIISSDGGPPRELANWERTQSQFKIEQAIWTSDSRWVLCTGSKRTQPD 515

Query: 370 KFAIGVMKKDGSQERLL 386
           ++    +  DG      
Sbjct: 516 EWDWFAVPVDGGGPVAT 532



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 83/284 (29%), Gaps = 33/284 (11%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H+ SD          G F   + F+SE       +  L +    G     LT S + +  
Sbjct: 351 HSYSDPTI----SPDGKF---VAFISER----SGRRQLWLQQVGGGEPIQLTHSNETVSS 399

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              F P+  ++ Y+T   +      +          R     +       S +G+R +  
Sbjct: 400 A-SFFPDGTRIVYSTASSDRRRTSTIEVIPTLGGQSRSLLNGTDFGGVALSPDGQRIVYV 458

Query: 276 VQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREGKEQLY- 329
                +  +  +         L     T + F    A ++ DS  ++    +  +   + 
Sbjct: 459 DSGQPSPRLMIISSDGGPPRELANWERTQSQFKIEQAIWTSDSRWVLCTGSKRTQPDEWD 518

Query: 330 --VMQSNGSDQKRISQDKEASYFDPV-WSPQ---GDLIAFTKFSGEKFAIGVMKKD---- 379
              +  +G                    SP+   GD + F      +     ++      
Sbjct: 519 WFAVPVDGGGPVATGAGAALRAAGLRMSSPRLMTGDRVLFGAGRARRVNAWEIRLSPRSW 578

Query: 380 --GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 R L   +  + P       ++     +  ++ S LY+I
Sbjct: 579 RANGPPRQLTFGTMNEWPWAISDTGTVAI---EASNSSSDLYAI 619


>gi|257094183|ref|YP_003167824.1| WD-40 repeat-containing protein [Candidatus Accumulibacter phosphatis
            clade IIA str. UW-1]
 gi|257046707|gb|ACV35895.1| WD-40 repeat protein [Candidatus Accumulibacter phosphatis clade IIA
            str. UW-1]
          Length = 1737

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/310 (16%), Positives = 102/310 (32%), Gaps = 46/310 (14%)

Query: 113  TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
               V      R  +        RLWD +  ++I  + +         +A + +D      
Sbjct: 1381 VASVAFSPDGRRLLSGTWDQTLRLWDAETGQEI--RSYTGHQGPVAGVA-SSAD------ 1431

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                             ++SG   ++L + D +                   FSP+ +++
Sbjct: 1432 --------------GRRLLSGSDDHTLRLWDAETGQEIRFFAGHQGPATSVAFSPDGRRL 1477

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
               + D      + L D    +  +     +  + +  FS +G+R L S   D  + ++ 
Sbjct: 1478 LSGSDDH----TLRLWDAETGQEIRSFAGHQDWVTSVAFSPDGRRLL-SGSHDHTLRLW- 1531

Query: 287  VDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             D +S    R         +S ++SPD  +++  SD    + L +  +    + R     
Sbjct: 1532 -DAESGQEIRSFAGHQGWVLSVAFSPDGRRLLSGSD---DQTLRLWDAESGQEIRSFAGH 1587

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRS 403
            +       +SP G  +           + +   +  QE          + +  +SP GR 
Sbjct: 1588 QGPVTSVAFSPDGRRLLSGSRDQT---LRLWDAETGQEIRSFAGHQGPVASVAFSPDGRR 1644

Query: 404  LIFSRKKDGD 413
            L+ S   DG 
Sbjct: 1645 LL-SGSHDGT 1653



 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 55/330 (16%), Positives = 109/330 (33%), Gaps = 48/330 (14%)

Query: 107  GAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFS----------SPAS 150
            G Q  VT  V      R  +        RLWD +  ++I  + F            SP  
Sbjct: 1208 GHQSAVT-SVALSPDGRRLLSGSHDRTLRLWDAETGQEI--RSFTGHQGGVASVAFSPDG 1264

Query: 151  WRKIAHTISDDIYQSITGEKG----------DFNSRILFVSESVV--SGIIKNSLCVMDR 198
             R ++ +  D   +    E G           + + + F  +     SG    +L + D 
Sbjct: 1265 RRLLSGSF-DQTLRLWDAETGQEIRSFAGHQSWVTSVAFSPDGRRLLSGSGDQTLRLWDA 1323

Query: 199  DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            +             ++    FSP+ + +   ++DD     + L +    +  +       
Sbjct: 1324 ESGQEIRSFAGHQSVVASVAFSPDGRHLVSGSWDD----SLLLWNAETGQEIRSFVGHHG 1379

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIV 317
             + +  FS +G+R L S   D+ + ++  D ++    R  T         + S D  +++
Sbjct: 1380 PVASVAFSPDGRRLL-SGTWDQTLRLW--DAETGQEIRSYTGHQGPVAGVASSADGRRLL 1436

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              SD      L +  +    + R     +       +SP G  +       +   + +  
Sbjct: 1437 SGSD---DHTLRLWDAETGQEIRFFAGHQGPATSVAFSPDGRRLL---SGSDDHTLRLWD 1490

Query: 378  KDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
             +  QE            +  +SP GR L+
Sbjct: 1491 AETGQEIRSFAGHQDWVTSVAFSPDGRRLL 1520



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 85/239 (35%), Gaps = 21/239 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    +L + D +              +    FSP+ +++   + D      + L D  
Sbjct: 1101 SGSHDQTLRLWDAETGEEIRSFAGHQGGVASVAFSPDGRRLLSGSDDQ----TLRLWDAE 1156

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
              +  +     +  +L+  FS +G+R L S  +D+ + ++  D ++    R         
Sbjct: 1157 TGQEIRSFTGHQGGVLSVAFSPDGRRLL-SGSRDQTLRLW--DAETGQEIRSFAGHQSAV 1213

Query: 305  ISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S + SPD  +++  S DR     L +  +    + R     +       +SP G  +  
Sbjct: 1214 TSVALSPDGRRLLSGSHDRT----LRLWDAETGQEIRSFTGHQGGVASVAFSPDGRRLLS 1269

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYS 420
              F      + +   +  QE            +  +SP GR L+      GD   +L+ 
Sbjct: 1270 GSFDQT---LRLWDAETGQEIRSFAGHQSWVTSVAFSPDGRRLL---SGSGDQTLRLWD 1322



 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 54/328 (16%), Positives = 108/328 (32%), Gaps = 48/328 (14%)

Query: 87   FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQII 140
              +    P+++     W   G   LV   V      R  +        RLWD +  ++I 
Sbjct: 1064 LPRLPARPEAL--LCPWLRQGHSSLVN-SVAFSPDGRRLLSGSHDQTLRLWDAETGEEI- 1119

Query: 141  GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
             + F         +A   S D                      ++SG    +L + D + 
Sbjct: 1120 -RSFAGHQGGVASVA--FSPD-------------------GRRLLSGSDDQTLRLWDAET 1157

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                         +    FSP+ +++   + D      + L D    +  +     +S +
Sbjct: 1158 GQEIRSFTGHQGGVLSVAFSPDGRRLLSGSRDQ----TLRLWDAETGQEIRSFAGHQSAV 1213

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
             +   S +G+R L S   D  + ++  D ++    R  T       S ++SPD  +++  
Sbjct: 1214 TSVALSPDGRRLL-SGSHDRTLRLW--DAETGQEIRSFTGHQGGVASVAFSPDGRRLLSG 1270

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            S     + L +  +    + R     ++      +SP G  +           + +   +
Sbjct: 1271 SF---DQTLRLWDAETGQEIRSFAGHQSWVTSVAFSPDGRRLL---SGSGDQTLRLWDAE 1324

Query: 380  GSQERLLV--EDSNLQAPTWSPSGRSLI 405
              QE        S + +  +SP GR L+
Sbjct: 1325 SGQEIRSFAGHQSVVASVAFSPDGRHLV 1352



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 52/307 (16%), Positives = 104/307 (33%), Gaps = 35/307 (11%)

Query: 121  KDRLRVEFRLWDVKDRKQIIG----KKFFSSPA---SWRKIAHTISDDIYQSITGEKG-- 171
                    RLWD +  ++I      + + +S A     R++     D   +    E G  
Sbjct: 1269 SGSFDQTLRLWDAETGQEIRSFAGHQSWVTSVAFSPDGRRLLSGSGDQTLRLWDAESGQE 1328

Query: 172  -----DFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
                    S +  V+ S      VSG   +SL + + +              +    FSP
Sbjct: 1329 IRSFAGHQSVVASVAFSPDGRHLVSGSWDDSLLLWNAETGQEIRSFVGHHGPVASVAFSP 1388

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + +++   T+D      + L D    +  +     +  +     S++G+R L S   D  
Sbjct: 1389 DGRRLLSGTWDQ----TLRLWDAETGQEIRSYTGHQGPVAGVASSADGRRLL-SGSDDHT 1443

Query: 282  MDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + ++  D ++    R          S ++SPD  +++  SD      L +  +    + R
Sbjct: 1444 LRLW--DAETGQEIRFFAGHQGPATSVAFSPDGRRLLSGSD---DHTLRLWDAETGQEIR 1498

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWS 398
                 +       +SP G  +           + +   +  QE          + +  +S
Sbjct: 1499 SFAGHQDWVTSVAFSPDGRRLLSGSHD---HTLRLWDAESGQEIRSFAGHQGWVLSVAFS 1555

Query: 399  PSGRSLI 405
            P GR L+
Sbjct: 1556 PDGRRLL 1562



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/321 (15%), Positives = 99/321 (30%), Gaps = 41/321 (12%)

Query: 113  TGRVIKEGKDRLRVE------FRLWDVKDRKQIIG----KKFFSSPASWRKIAHTIS--- 159
               V      R  +        RLWD +  ++I      +   +S A      H +S   
Sbjct: 1297 VTSVAFSPDGRRLLSGSGDQTLRLWDAESGQEIRSFAGHQSVVASVAFSPDGRHLVSGSW 1356

Query: 160  DDI-----------YQSITGEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLT 207
            DD             +S  G  G   S         + SG    +L + D +        
Sbjct: 1357 DDSLLLWNAETGQEIRSFVGHHGPVASVAFSPDGRRLLSGTWDQTLRLWDAETGQEIRSY 1416

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                  +     S + +++   + D      + L D    +  +     +    +  FS 
Sbjct: 1417 TGHQGPVAGVASSADGRRLLSGSDDH----TLRLWDAETGQEIRFFAGHQGPATSVAFSP 1472

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+R L S   D  + ++  D ++    R          S ++SPD  +++  S      
Sbjct: 1473 DGRRLL-SGSDDHTLRLW--DAETGQEIRSFAGHQDWVTSVAFSPDGRRLLSGSH---DH 1526

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             L +  +    + R     +       +SP G  +           + +   +  QE   
Sbjct: 1527 TLRLWDAESGQEIRSFAGHQGWVLSVAFSPDGRRLLSGSDDQT---LRLWDAESGQEIRS 1583

Query: 387  V--EDSNLQAPTWSPSGRSLI 405
                   + +  +SP GR L+
Sbjct: 1584 FAGHQGPVTSVAFSPDGRRLL 1604


>gi|309792071|ref|ZP_07686545.1| peptidase S9 prolyl oligopeptidase [Oscillochloris trichoides DG6]
 gi|308225878|gb|EFO79632.1| peptidase S9 prolyl oligopeptidase [Oscillochloris trichoides DG6]
          Length = 683

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/269 (18%), Positives = 91/269 (33%), Gaps = 37/269 (13%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSN 268
            L + + SP+ Q +A      +     Y     +        +R          PR+S +
Sbjct: 18  WLEDAQISPDGQHIAVVQVAVDRRANAYQRSIYVIRVDGGPLRRFTVGNGQDRQPRWSPD 77

Query: 269 GKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES------- 320
           G+       +D     IY + L     + LT          +SPD   +   S       
Sbjct: 78  GRTLAFVSTRDNPQGQIYRIRLDGGEAQCLTALPNGASDPVWSPDGRMLACLSSVNAEER 137

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-GDLIAFTK----FSGEKFAIGV 375
            RE   +     ++    +R  +++E +     + P+    + +      F      I V
Sbjct: 138 SREENPEPTPPPADAWAARRAQEEREHAE-AQRFDPRVITKLPYRSGTSYFDDRHRHIYV 196

Query: 376 MK-KDG------SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-----KLYSIDL 423
           ++  DG      +  R+   D +  APTW P G SL+ +  +D D  S      +  + +
Sbjct: 197 LEVPDGDVEAPPTPRRITQGDLHHSAPTWMPDGLSLLTTASRDPDADSLFAYEDVLRVPV 256

Query: 424 NGRNETLINTPAY-------ASDPQWVGF 445
           +G     + T  Y       A D   + F
Sbjct: 257 DGGPALRLTTAGYTCLTPQPAPDGSQIAF 285



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 58/364 (15%), Positives = 116/364 (31%), Gaps = 68/364 (18%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            +V   V +   +  +    +  V        ++F       R+                
Sbjct: 32  AVVQVAVDRRA-NAYQRSIYVIRVDGGPL---RRFTVGNGQDRQ---------------P 72

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-Y 228
           +   + R L    +      +  +  +  DG   + LT   +    +P +SP+ + +A  
Sbjct: 73  RWSPDGRTLAFVSTR--DNPQGQIYRIRLDGGEAQCLTALPNG-ASDPVWSPDGRMLACL 129

Query: 229 ATYDDEDILRVYLMDTRIDRA----PKRIGNFRSMILAPRFSSNGKRALI--------SV 276
           ++ + E+  R    +     A     +R    R    A RF     R +         S 
Sbjct: 130 SSVNAEERSREENPEPTPPPADAWAARRAQEEREHAEAQRFDP---RVITKLPYRSGTSY 186

Query: 277 QKDEAMDIYSVDLQSN------ATERLTNTLFINISASYSPDSSQIVFESDRE------- 323
             D    IY +++            R+T     + + ++ PD   ++  + R+       
Sbjct: 187 FDDRHRHIYVLEVPDGDVEAPPTPRRITQGDLHHSAPTWMPDGLSLLTTASRDPDADSLF 246

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVMKK 378
             E +  +  +G    R++     +   P  +P G  IAF +   ++       + VM  
Sbjct: 247 AYEDVLRVPVDGGPALRLTTAG-YTCLTPQPAPDGSQIAFRRIREDRLLADGAHVAVMPA 305

Query: 379 DGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            G   + +    D N+    W P G+S+       G        I  +G    L  T  +
Sbjct: 306 AGGPIQEVTGYLDRNVDQFAWHPDGQSVYLLSGWHGAAQ-----ISSSG----LPATSTF 356

Query: 437 ASDP 440
             DP
Sbjct: 357 QQDP 360



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 22/64 (34%), Gaps = 5/64 (7%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGRNETLIN-TPAYASDP 440
           L + + L+    SP G+ +   +    ++       +Y I ++G               P
Sbjct: 13  LYDLAWLEDAQISPDGQHIAVVQVAVDRRANAYQRSIYVIRVDGGPLRRFTVGNGQDRQP 72

Query: 441 QWVG 444
           +W  
Sbjct: 73  RWSP 76



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 65/221 (29%), Gaps = 20/221 (9%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
           +      ++IT  D       W   G  +L T     +       E    DV       G
Sbjct: 204 VEAPPTPRRITQGDLHHSAPTWMPDGLSLLTTASRDPDADSLFAYE----DVLRVPVDGG 259

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDG 200
                + A             Y  +T +     S+I F        +   + + VM   G
Sbjct: 260 PALRLTTAG------------YTCLTPQPAPDGSQIAFRRIREDRLLADGAHVAVMPAAG 307

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             I+ +T   D+ + +  + P+ Q V   +                    +  G      
Sbjct: 308 GPIQEVTGYLDRNVDQFAWHPDGQSVYLLSGWHGAAQISSSGLPATSTFQQDPGVVGGTQ 367

Query: 261 LAPRFS--SNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +   FS   +G  A I+       +++ V L   +  +LT 
Sbjct: 368 IISEFSVARDGTLAWIAGSAAAPCNLF-VRLPDGSERQLTQ 407


>gi|83859759|ref|ZP_00953279.1| hypothetical protein OA2633_07159 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852118|gb|EAP89972.1| hypothetical protein OA2633_07159 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 658

 Score = 99.3 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 69/176 (39%), Gaps = 8/176 (4%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +G RA           ++ +D +     RLT    I     ++PD   +++ +D +G
Sbjct: 72  LSPDGSRAAFRWSITGEPQLWIMDAEGGQPTRLTYGNGI-TFFRWTPDGDSLIYGADNDG 130

Query: 325 KEQ--LYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTK--FSGEKFAIGVMKKD 379
            EQ   Y + + G  + ++   ++ ++     +   G  I F     +   F I     +
Sbjct: 131 NEQEAYYRISAVGLHEDQVFPAEDGAFRVFGDFGADGQTIVFASTARNNLDFDIYTADLE 190

Query: 380 GSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +  ++ E S    P   SP GR +  S+ + G+    L  + L     T I+ P
Sbjct: 191 TGERSMVYEGSYANYPGAISPDGRFVTVSQSR-GEDSDDLGLLSLETGAFTPISAP 245



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 57/136 (41%), Gaps = 7/136 (5%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD S+  F     G+ QL++M + G    R++     ++F   W+P GD + +   +  
Sbjct: 73  SPDGSRAAFRWSITGEPQLWIMDAEGGQPTRLTYGNGITFF--RWTPDGDSLIYGADNDG 130

Query: 370 K-----FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + I  +     Q     + +      +   G++++F+     +    +Y+ DL 
Sbjct: 131 NEQEAYYRISAVGLHEDQVFPAEDGAFRVFGDFGADGQTIVFASTARNNLDFDIYTADLE 190

Query: 425 GRNETLINTPAYASDP 440
               +++   +YA+ P
Sbjct: 191 TGERSMVYEGSYANYP 206



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 76/196 (38%), Gaps = 13/196 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +MD +G     LT       F  R++P+   + Y   +D +    Y   + +     
Sbjct: 90  QLWIMDAEGGQPTRLTYGNGITFF--RWTPDGDSLIYGADNDGNEQEAYYRISAVGLHED 147

Query: 252 RIGNFRSMILAPR----FSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           ++  F +   A R    F ++G+  +   + + +   DIY+ DL++     +    + N 
Sbjct: 148 QV--FPAEDGAFRVFGDFGADGQTIVFASTARNNLDFDIYTADLETGERSMVYEGSYANY 205

Query: 306 SASYSPDSSQI-VFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAF 363
             + SPD   + V +S  E  + L ++         IS  ++ A+     W         
Sbjct: 206 PGAISPDGRFVTVSQSRGEDSDDLGLLSLETGAFTPISAPERRAAQGSIAWQDDSSGFYL 265

Query: 364 TKFSGEKFAIGVMKKD 379
               G +++  +M+ D
Sbjct: 266 VSNRGREYS-ALMRYD 280



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 40/109 (36%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S  +    + +   + +D  R       +      SP G   AF      +  + +M  +
Sbjct: 38  SPSDEAVSIGLAGEDPADIARYLLAANGAAGGAQLSPDGSRAAFRWSITGEPQLWIMDAE 97

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           G Q   L   + +    W+P G SLI+    DG+     Y I   G +E
Sbjct: 98  GGQPTRLTYGNGITFFRWTPDGDSLIYGADNDGNEQEAYYRISAVGLHE 146



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 23/203 (11%), Positives = 60/203 (29%), Gaps = 7/203 (3%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFSPNQQKVAYATYDDEDI-LRVYLMD 243
            G  + +   +   G +   + P+ D        F  + Q + +A+    ++   +Y  D
Sbjct: 129 DGNEQEAYYRISAVGLHEDQVFPAEDGAFRVFGDFGADGQTIVFASTARNNLDFDIYTAD 188

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNT-- 300
                    +            S +G+   +S  +  ++ D+  + L++ A   ++    
Sbjct: 189 LETGERS-MVYEGSYANYPGAISPDGRFVTVSQSRGEDSDDLGLLSLETGAFTPISAPER 247

Query: 301 LFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                S ++  DSS     S+R      L       +    +           +      
Sbjct: 248 RAAQGSIAWQDDSSGFYLVSNRGREYSALMRYDVFTNSFSLVESAPHDIESVDLCGENDR 307

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQ 382
            + ++   G    +        +
Sbjct: 308 YLVWSVNEGGYSRLHARDLSTGE 330


>gi|298241399|ref|ZP_06965206.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297554453|gb|EFH88317.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 487

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 97/279 (34%), Gaps = 32/279 (11%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--FSPNQQKVAYATYDDEDILRV 239
           + + SG   N++ V D       ++        ++    +SP+ + +A  + D +  + +
Sbjct: 129 KRIASGGYDNTVRVWDASSGRQLFIHRGYHTDAYDKGLGWSPDSKHIA--SIDKDSSIHI 186

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +      +    R+    S +    +S +G R  +S        +  V++ S      T 
Sbjct: 187 WDATNGGNERVIRLSLKPSYL---SWSPDGTRLAVSDNHTSDGVVQIVEVASGDV-LYTF 242

Query: 300 --TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                     ++SPD  +I   S  +G   L V    G    ++ +  +       WSP 
Sbjct: 243 KGHTSFVSQIAWSPDGKRIA-SSSEDG--MLLVWDPEGKGSTQVYKGHQGEASYLAWSPD 299

Query: 358 GDLIAFTKFSGEKFAIGVMK-KDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKD 411
           G  IA    S   +   +++ ++ +  RLL       D ++    WSP G+ +  S   D
Sbjct: 300 GKRIASVSMSRRPYDDDIVQVREVANLRLLYAYQLASDYHVTGVAWSPDGKRIAISADPD 359

Query: 412 ------GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                   TG  ++S       +           P W  
Sbjct: 360 LIQVWNAATGHPIFSYYGASNGDRFTT-------PDWSP 391



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 10/230 (4%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +   +G           + +    +SP+ +++A   YD  + +RV+   +       R 
Sbjct: 99  WLRSLEGQTPLVNLSGHTESVTMAAWSPDGKRIASGGYD--NTVRVWDASSGRQLFIHRG 156

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +  +      +S + K    S+ KD ++ I+  D  +   ER+          S+SPD 
Sbjct: 157 YHTDAYDKGLGWSPDSKHIA-SIDKDSSIHIW--DATNGGNERVIRLSLKPSYLSWSPDG 213

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +++    +      + +++    D     +   +      WSP G  IA +   G    +
Sbjct: 214 TRLAVSDNHTSDGVVQIVEVASGDVLYTFKGHTSFVSQIAWSPDGKRIASSSEDG---ML 270

Query: 374 GVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            V   +G     + +    +A    WSP G+ +             +  +
Sbjct: 271 LVWDPEGKGSTQVYKGHQGEASYLAWSPDGKRIASVSMSRRPYDDDIVQV 320



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 55/308 (17%), Positives = 99/308 (32%), Gaps = 44/308 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            +          R+WD    +Q+             +  HT   D Y    G   D    
Sbjct: 129 KRIASGGYDNTVRVWDASSGRQLF----------IHRGYHT---DAYDKGLGWSPD---- 171

Query: 177 ILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
               S+ + S    +S+ + D  +G N R +  S         +SP+  ++A +     D
Sbjct: 172 ----SKHIASIDKDSSIHIWDATNGGNERVIRLSLKPSYL--SWSPDGTRLAVSDNHTSD 225

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            + V +++              S +    +S +GKR   S  +D  + ++  D +   + 
Sbjct: 226 GV-VQIVEVASGDVLYTFKGHTSFVSQIAWSPDGKRIA-SSSEDGMLLVW--DPEGKGST 281

Query: 296 RLTNTLFINISAS---YSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYF- 350
           ++         AS   +SPD  +I   S  R   +   V     ++ + +   + AS + 
Sbjct: 282 QV--YKGHQGEASYLAWSPDGKRIASVSMSRRPYDDDIVQVREVANLRLLYAYQLASDYH 339

Query: 351 --DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL----LVEDSNLQAPTWSPSGRSL 404
                WSP G  IA +        I V                       P WSP    L
Sbjct: 340 VTGVAWSPDGKRIAISADPD---LIQVWNAATGHPIFSYYGASNGDRFTTPDWSPDSTKL 396

Query: 405 IFSRKKDG 412
           + +     
Sbjct: 397 VVASSDHN 404


>gi|332661895|ref|YP_004451364.1| WD40 repeat-containing protein [Haliscomenobacter hydrossis DSM
           1100]
 gi|332337392|gb|AEE54491.1| WD40 repeat-containing protein [Haliscomenobacter hydrossis DSM
           1100]
          Length = 598

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 103/309 (33%), Gaps = 36/309 (11%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            +          ++WDV+  KQ++  K            H  S  +        G     
Sbjct: 198 KRLATGSSDHSAKIWDVESGKQVLSLK-----------GH--SSYVSSVAFSPDG----- 239

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                + + +G    S  + D +              +    FSP+ +++A  + D    
Sbjct: 240 -----KRLATGSDDKSAKIWDVESGKQTLSLEGHSSYVSSVAFSPDGKRLATGSGDK--- 291

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
               + D    +    +      + +  FS +GKR + +  +D++  I+ V+        
Sbjct: 292 -SAKIWDVESGKQTLSLEGHSDYVWSVAFSPDGKRLV-TGSQDQSAKIWDVE-SGKQLLS 348

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L        S ++SPD  ++   SD    +   +       +    +   ++     +SP
Sbjct: 349 LEGHRSAVNSVAFSPDGKRLATGSD---DQSAKIWDVESGKRVLSLEGHRSAVKSVAFSP 405

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +A T    +   I  ++       L      +++  +SP G+ L    +   D  +
Sbjct: 406 DGKRLA-TGSGDKSAKIWDLESGKQALSLERHSDYVRSVAFSPDGKRLATGSQ---DQSA 461

Query: 417 KLYSIDLNG 425
           K++ I   G
Sbjct: 462 KIWDISPEG 470



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 92/250 (36%), Gaps = 17/250 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + +G   +S  + D +              +    FSP+ +++A  + D        +
Sbjct: 198 KRLATGSSDHSAKIWDVESGKQVLSLKGHSSYVSSVAFSPDGKRLATGSDDK----SAKI 253

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
            D    +    +    S + +  FS +GKR   +   D++  I+  D++S      L   
Sbjct: 254 WDVESGKQTLSLEGHSSYVSSVAFSPDGKRLA-TGSGDKSAKIW--DVESGKQTLSLEGH 310

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++V  S     +   +       Q    +   ++     +SP G  
Sbjct: 311 SDYVWSVAFSPDGKRLVTGSQ---DQSAKIWDVESGKQLLSLEGHRSAVNSVAFSPDGKR 367

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +A T    +   I  ++       L    S +++  +SP G+ L       GD  +K++ 
Sbjct: 368 LA-TGSDDQSAKIWDVESGKRVLSLEGHRSAVKSVAFSPDGKRLA---TGSGDKSAKIW- 422

Query: 421 IDLNGRNETL 430
            DL    + L
Sbjct: 423 -DLESGKQAL 431



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 111/319 (34%), Gaps = 37/319 (11%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS--ITGEKGDFNSRI---LFVSESV 184
           L DV  ++         +  + R+     ++D+     I  E+ D  +      F    V
Sbjct: 92  LADVAKQQ--AETNRKQAEDNRRQALTAYANDLAYKSQIALERSDRTTAFQLATFAHRYV 149

Query: 185 VSGIIKNSLCVMDRDGAN---------IRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            +G    +  +++    N                    L    FSP+ +++A  + D   
Sbjct: 150 EAGNANVTRALIEALYYNDVPSHSPLPWSAALEGHSSYLSSVAFSPDGKRLATGSSDH-- 207

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                + D    +    +    S + +  FS +GKR   +   D++  I+  D++S    
Sbjct: 208 --SAKIWDVESGKQVLSLKGHSSYVSSVAFSPDGKRLA-TGSDDKSAKIW--DVESGKQT 262

Query: 296 -RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             L        S ++SPD  ++   S   G +   +       Q    +      +   +
Sbjct: 263 LSLEGHSSYVSSVAFSPDGKRLATGS---GDKSAKIWDVESGKQTLSLEGHSDYVWSVAF 319

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKD 411
           SP G  +  T    +   I  ++   S ++LL      S + +  +SP G+ L       
Sbjct: 320 SPDGKRLV-TGSQDQSAKIWDVE---SGKQLLSLEGHRSAVNSVAFSPDGKRLATGSD-- 373

Query: 412 GDTGSKLYSIDLNGRNETL 430
            D  +K++ ++   R  +L
Sbjct: 374 -DQSAKIWDVESGKRVLSL 391



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 60/181 (33%), Gaps = 36/181 (19%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           LVTG   +          ++WDV+  KQ++  +            H  +  +        
Sbjct: 326 LVTGSQDQSA--------KIWDVESGKQLLSLE-----------GHRSA--VNSVAFSPD 364

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G          + + +G    S  + D +              +    FSP+ +++A  +
Sbjct: 365 G----------KRLATGSDDQSAKIWDVESGKRVLSLEGHRSAVKSVAFSPDGKRLATGS 414

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D        + D    +    +      + +  FS +GKR   +  +D++  I+ +  +
Sbjct: 415 GDK----SAKIWDLESGKQALSLERHSDYVRSVAFSPDGKRLA-TGSQDQSAKIWDISPE 469

Query: 291 S 291
            
Sbjct: 470 G 470


>gi|171676738|ref|XP_001903321.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936436|emb|CAP61093.1| unnamed protein product [Podospora anserina S mat+]
          Length = 959

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 91/261 (34%), Gaps = 23/261 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + + +  + +         +    FSP+ + +A  + D      + + +  
Sbjct: 717 SGSGDRTIKIWNLETGSCQQTLEGHSDSVRSVVFSPDSKWIASGSDDR----TIKIWNLE 772

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                + +      + +  FS + K    S   D  + I+  +L++ + ++ L       
Sbjct: 773 TGSCQQTLEGHSDSVWSVVFSPDSKWIA-SGSDDHTIKIW--NLETGSCQQTLEGHSDSV 829

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  +SPDS  I   SD      + +        ++  +    S    V+SP    IA  
Sbjct: 830 WSVVFSPDSKWIASGSD---DRTIKIWNLETGSCQQTLEGHSDSVRSVVFSPDSKWIA-- 884

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                   I +   +    +  +E  +   ++  +SP  + +        D   K+++++
Sbjct: 885 -SGSGDRTIKIWNLETGSCQQTLEGHSDSVRSVVFSPDSKWIASGSD---DRTIKIWNLE 940

Query: 423 LNGRNETLINTPAYASDPQWV 443
                +TL       SD  W 
Sbjct: 941 TGSCQQTL----EGHSDSVWS 957



 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 97/268 (36%), Gaps = 25/268 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + + +  + +         +    FSP+ + +A  + D      + + +  
Sbjct: 633 SGSDDRTIKIWNLETGSCQQTLEGHSSSVGSVVFSPDSKWIASGSGD----CTIKIWNLE 688

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                + +      + +  FS + K    S   D  + I+  +L++ + ++ L       
Sbjct: 689 TGSCQQTLEGHSGWVWSVVFSPDSKWIA-SGSGDRTIKIW--NLETGSCQQTLEGHSDSV 745

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  +SPDS  I   SD      + +        ++  +    S +  V+SP    IA  
Sbjct: 746 RSVVFSPDSKWIASGSD---DRTIKIWNLETGSCQQTLEGHSDSVWSVVFSPDSKWIA-- 800

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +   I +   +    +  +E  +    +  +SP  + +        D   K+++++
Sbjct: 801 -SGSDDHTIKIWNLETGSCQQTLEGHSDSVWSVVFSPDSKWIASGSD---DRTIKIWNLE 856

Query: 423 LNGRNETL------INTPAYASDPQWVG 444
                +TL      + +  ++ D +W+ 
Sbjct: 857 TGSCQQTLEGHSDSVRSVVFSPDSKWIA 884



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 93/260 (35%), Gaps = 31/260 (11%)

Query: 204 RYLTPSRDQILFEP--------RFSPNQQ--KVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           R++  S+  I   P         FSP +   +  +   + + I    ++    +   + +
Sbjct: 553 RFILNSQSIIDIAPLQIYASALVFSPARSITRGIFKQEERKWITSGPIVQDSWNACRQTL 612

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPD 312
                 + +  FS + K    S   D  + I+  +L++ + ++ L        S  +SPD
Sbjct: 613 EGHSDSVRSVVFSPDSKWIA-SGSDDRTIKIW--NLETGSCQQTLEGHSSSVGSVVFSPD 669

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S  I   S   G   + +        ++  +      +  V+SP    IA          
Sbjct: 670 SKWIASGS---GDCTIKIWNLETGSCQQTLEGHSGWVWSVVFSPDSKWIA---SGSGDRT 723

Query: 373 IGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           I +   +    +  +E  +   ++  +SP  + +        D   K+++++     +TL
Sbjct: 724 IKIWNLETGSCQQTLEGHSDSVRSVVFSPDSKWIASGSD---DRTIKIWNLETGSCQQTL 780

Query: 431 ------INTPAYASDPQWVG 444
                 + +  ++ D +W+ 
Sbjct: 781 EGHSDSVWSVVFSPDSKWIA 800


>gi|73670800|ref|YP_306815.1| hypothetical protein Mbar_A3362 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397962|gb|AAZ72235.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 574

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 82/401 (20%), Positives = 143/401 (35%), Gaps = 68/401 (16%)

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVT-GRVIKEGKDRLRVEF 128
           S+DL     FN+   +   Q      +I    +W+  G  +LVT  + +    +   V  
Sbjct: 27  SEDLS----FNVTPLNKILQIEKGFMTIS--TEWSPDGQYLLVTYSKWVPPSTN--IVRH 78

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTIS-DDIYQSITGEKGDFNSRILF-VSESVVS 186
            L D   R          +        H +  D I Q+     GD   +I F VS    +
Sbjct: 79  YLLDTNSR----------TFGEIDYGVHGLDTDGILQAKWIPSGD---KICFEVSGYGPT 125

Query: 187 GIIKNSLCVMDRDGANIRYLTP------------SRDQILFEPRFSPNQQKVAYATYDDE 234
           G     +   + DG N+R +                       ++SP+  K+ +     E
Sbjct: 126 GAGNCYIF-CNPDGTNLRGVGTNYADLSKILENLGDIGFQRNLKWSPDSSKIVFEWQKPE 184

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +      +  R     + + +       P +   G   +  V+ +  +++ S   +    
Sbjct: 185 NASTEVYVANRNGTNARELSSATYPQ--PAWY--GSDKIFIVKDEGNVELLS---EGGDL 237

Query: 295 ERLTNTLFINIS----ASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKR-ISQDKEA 347
            + T             S SPD  +I+F S  +G    Q Y+  ++GS+ K  IS     
Sbjct: 238 IQ-TFQPENKDEKYCVFSLSPDRKKIIFASGLQGSFDSQTYISNTDGSNLKGNISYYDGD 296

Query: 348 S------YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           +           W P G L+       +   + +++ D + +RLL E  N   P W P G
Sbjct: 297 NPEDTNLLTKEYWQPNGSLLLV----NQNRNLYIVEGDENNKRLLYE-GNASEPQWFPDG 351

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           + ++F   K+     KLYSID++G N + I          W
Sbjct: 352 KKILFVENKN-----KLYSIDIDGTNLSFITNFGPTPAHSW 387



 Score = 73.1 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 57/300 (19%), Positives = 105/300 (35%), Gaps = 33/300 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-PRFSP 221
           Y        +     L  + S   G I   +  +D DG       PS D+I FE   + P
Sbjct: 65  YSKWVPPSTNIVRHYLLDTNSRTFGEIDYGVHGLDTDGILQAKWIPSGDKICFEVSGYGP 124

Query: 222 NQ--QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                   +   D  ++  V      + +  + +G+        ++S +  + +   QK 
Sbjct: 125 TGAGNCYIFCNPDGTNLRGVGTNYADLSKILENLGDI-GFQRNLKWSPDSSKIVFEWQKP 183

Query: 280 EA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           E    ++Y  +        L++  +     ++    S  +F    EG  +L    S G D
Sbjct: 184 ENASTEVYVANRNGTNARELSSATYPQ--PAWY--GSDKIFIVKDEGNVELL---SEGGD 236

Query: 338 QKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQ 393
             +  Q  +K+  Y     SP    I F       F     +   DGS  +  +   +  
Sbjct: 237 LIQTFQPENKDEKYCVFSLSPDRKKIIFASGLQGSFDSQTYISNTDGSNLKGNISYYDGD 296

Query: 394 AP---------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            P          W P+G  L+ ++ ++      LY ++ +  N+ L+     AS+PQW  
Sbjct: 297 NPEDTNLLTKEYWQPNGSLLLVNQNRN------LYIVEGDENNKRLL-YEGNASEPQWFP 349



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 84/271 (30%), Gaps = 57/271 (21%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +   ++D+       SP+++K+ +A+        + Y+ +T        I  +       
Sbjct: 241 FQPENKDEKYCVFSLSPDRKKIIFASGLQGSFDSQTYISNTDGSNLKGNISYYDGDNPED 300

Query: 264 R-------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                   +  NG   L+    ++  ++Y V+   N    L           + PD  +I
Sbjct: 301 TNLLTKEYWQPNGSLLLV----NQNRNLYIVEGDENNKRLL--YEGNASEPQWFPDGKKI 354

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD------------PVWSPQGDLIAFT 364
           +F    E K +LY +  +G++   I+                        SP  D I F 
Sbjct: 355 LFV---ENKNKLYSIDIDGTNLSFITNFGPTPAHSWYNSDKIDRFSIYSISPSSDFIVFA 411

Query: 365 KF---SGEKFA----------------------IGVMKKDGSQERLLVEDSNLQAP---T 396
                   KF                       + ++  +GS    +   +  +      
Sbjct: 412 SALNPDTGKFYENETDKILESANDSRYSSIAAPLFIVNCNGSSLTQVTPTTRGRFDMLRR 471

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           W P G+           T  + + +DLN +N
Sbjct: 472 WRPDGKQFTIESYYLYKTDWEDFLVDLNNQN 502


>gi|156056266|ref|XP_001594057.1| hypothetical protein SS1G_05485 [Sclerotinia sclerotiorum 1980]
 gi|154703269|gb|EDO03008.1| hypothetical protein SS1G_05485 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 582

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 56/326 (17%), Positives = 108/326 (33%), Gaps = 38/326 (11%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQI------------------IGKKFFSSPASWRKIAHTI 158
            K          RLWD    + +                    K    S     ++  TI
Sbjct: 196 TKVASGSSDQTIRLWDTATGESLQTLMGHSGWVYSVAFSPDGTKVASGSSDQTIRLWDTI 255

Query: 159 SDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           + +  Q++ G  G  NS       + V SG    ++ + D                ++  
Sbjct: 256 TGESLQTLEGHTGGVNSVAFSPDGTKVASGSYDQTIRLWDTATGESLQTLMGHAGSVWSV 315

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  K+A  +YD      + L DT      + +      I +  FS +G +   S  
Sbjct: 316 AFSPDGTKIASGSYDQ----TIRLWDTATSEWLQTLEGHTGWIRSVAFSPDGTKIA-SGS 370

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +D+ + ++  D  +    + L        S ++S D ++I   S     + + +  +   
Sbjct: 371 EDQTIRLW--DTATGEWLQTLMGHAGSVNSVAFSSDGTKIASGSS---DQTIRLWDTATG 425

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQA 394
           +  +  +D   S     +SP G  IA          I +      +    +E     +++
Sbjct: 426 EWLQTLEDYSGSVSSVAFSPDGTKIASGSSDQT---IRLWDTATGEWLQTLEGHTGWIRS 482

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +SP G  +       GD   +L+ 
Sbjct: 483 VAFSPDGTKVA---SGSGDQTIRLWD 505



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 115/351 (32%), Gaps = 40/351 (11%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQI------------------IGKKFFSSPASWRKIAHTI 158
            K          RLWD    + +                    K    S     ++    
Sbjct: 28  TKVASGSEDHTIRLWDAATGESLQTLKGHSSSVNSVAFSSDGTKVASGSSDQTIRLWDAA 87

Query: 159 SDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFE 216
           + +  Q++ G +G   S       + V SG    ++ + D   G +++ L   R  +   
Sbjct: 88  TGESLQTLKGHRGGVYSVAFSPDGTKVASGSYDQTIRLWDTATGESLQTLKGHRGGVYSV 147

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             FS +  KVA  + D      + L DT    + + +      + +  FS +G +   S 
Sbjct: 148 -AFSSDGTKVASGSSDQ----TIRLWDTATSESLQTLEGHSGWVYSVAFSPDGTKVA-SG 201

Query: 277 QKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             D+ + ++  D  +    + L        S ++SPD +++   S     + + +  +  
Sbjct: 202 SSDQTIRLW--DTATGESLQTLMGHSGWVYSVAFSPDGTKVASGSS---DQTIRLWDTIT 256

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQ 393
            +  +  +          +SP G  +A   +      I +      +  + L+    ++ 
Sbjct: 257 GESLQTLEGHTGGVNSVAFSPDGTKVASGSYDQT---IRLWDTATGESLQTLMGHAGSVW 313

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +  +SP G  +        D   +L+    +   +TL     +     +  
Sbjct: 314 SVAFSPDGTKIASGSY---DQTIRLWDTATSEWLQTLEGHTGWIRSVAFSP 361



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 82/258 (31%), Gaps = 30/258 (11%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQI------------------IGKKFFSSPASWRKIAHTI 158
            K          RLWD    + +                    K    S     ++  T 
Sbjct: 280 TKVASGSYDQTIRLWDTATGESLQTLMGHAGSVWSVAFSPDGTKIASGSYDQTIRLWDTA 339

Query: 159 SDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           + +  Q++ G  G   S       + + SG    ++ + D                +   
Sbjct: 340 TSEWLQTLEGHTGWIRSVAFSPDGTKIASGSEDQTIRLWDTATGEWLQTLMGHAGSVNSV 399

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS +  K+A  + D      + L DT      + + ++   + +  FS +G +   S  
Sbjct: 400 AFSSDGTKIASGSSDQ----TIRLWDTATGEWLQTLEDYSGSVSSVAFSPDGTKIA-SGS 454

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D+ + ++  D  +    + L        S ++SPD +++   S   G + + +  +   
Sbjct: 455 SDQTIRLW--DTATGEWLQTLEGHTGWIRSVAFSPDGTKVASGS---GDQTIRLWDAATG 509

Query: 337 DQKRISQDKEASYFDPVW 354
           +  +  ++         +
Sbjct: 510 ESLQTLKNHSGLEASSAF 527



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/202 (11%), Positives = 67/202 (33%), Gaps = 15/202 (7%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
              + + +   R  + +  FSS+G +   S  +D  + ++  D  +    + L       
Sbjct: 4   TGESLQTLKGHRGSVRSVAFSSDGTKVA-SGSEDHTIRLW--DAATGESLQTLKGHSSSV 60

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++S D +++   S     + + +  +   +  +  +      +   +SP G  +A  
Sbjct: 61  NSVAFSSDGTKVASGSS---DQTIRLWDAATGESLQTLKGHRGGVYSVAFSPDGTKVASG 117

Query: 365 KFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +      I +      +    ++     + +  +S  G  +        D   +L+   
Sbjct: 118 SYDQT---IRLWDTATGESLQTLKGHRGGVYSVAFSSDGTKVA---SGSSDQTIRLWDTA 171

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            +   +TL     +     +  
Sbjct: 172 TSESLQTLEGHSGWVYSVAFSP 193


>gi|315499889|ref|YP_004088692.1| wd40-like beta propeller containing protein [Asticcacaulis
           excentricus CB 48]
 gi|315417901|gb|ADU14541.1| WD40-like beta Propeller containing protein [Asticcacaulis
           excentricus CB 48]
          Length = 275

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 79/203 (38%), Gaps = 17/203 (8%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKD 279
           P+ Q +      + D   +Y +       P+R+    S       S++G     + + + 
Sbjct: 75  PDGQTLLITDKAEYDRACIYAVPL-CGGTPQRVSVHMSSYYH-GISADGAWITYTGIHQK 132

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +   IY   +  +    L     ++    +S D   I F S+R G+ QL+ ++ +G + +
Sbjct: 133 DVFGIYISRIDGSDERALIVGDALHDGPDFSTDGEWIWFNSNRSGQMQLWRIRRDGRELQ 192

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKF---------SGEKFAIGVMKKDGSQERLLVE-- 388
           R+S    A +F P  SP    + +  +           +   + +M  +G +   L E  
Sbjct: 193 RMSDSPYADWF-PHPSPDDRHVLWLSYDSSVGRDHPRDQTVRLRLMPAEGGEAETLFELF 251

Query: 389 --DSNLQAPTWSPSGRSLIFSRK 409
                +  P W+P G+S  F R 
Sbjct: 252 GGQGTMNVPNWAPDGQSFAFVRY 274



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 70/185 (37%), Gaps = 14/185 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  +   G   + ++            S +   + Y     +D+  +Y+         + 
Sbjct: 93  IYAVPLCGGTPQRVSVHMSSYYHG--ISADGAWITYTGIHQKDVFGIYISRID-GSDERA 149

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +    ++   P FS++G+    +  +   M ++ +       +R++++ + +     SPD
Sbjct: 150 LIVGDALHDGPDFSTDGEWIWFNSNRSGQMQLWRIRRDGRELQRMSDSPYADWFPHPSPD 209

Query: 313 SSQIVFESD---------REGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLI 361
              +++ S          R+   +L +M + G + + +      + +   P W+P G   
Sbjct: 210 DRHVLWLSYDSSVGRDHPRDQTVRLRLMPAEGGEAETLFELFGGQGTMNVPNWAPDGQSF 269

Query: 362 AFTKF 366
           AF ++
Sbjct: 270 AFVRY 274



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 79/196 (40%), Gaps = 14/196 (7%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI--N 304
            R  + +     +  +P F+ +G  A + +  +    IY + L S   + +     +  N
Sbjct: 14  SRQSRVVFQGPELWESPHFTPDG--AALILNSEGR--IYHLPLDSK-PQAIDTGFAVRCN 68

Query: 305 ISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                +PD   ++     E     +Y +   G   +R+S    + Y     S  G  I +
Sbjct: 69  NDHGLTPDGQTLLITDKAEYDRACIYAVPLCGGTPQRVSVHMSSYYHG--ISADGAWITY 126

Query: 364 TK-FSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           T     + F I + + DGS ER L+V D+    P +S  G  + F+  + G    +L+ I
Sbjct: 127 TGIHQKDVFGIYISRIDGSDERALIVGDALHDGPDFSTDGEWIWFNSNRSGQM--QLWRI 184

Query: 422 DLNGRNETLINTPAYA 437
             +GR    ++   YA
Sbjct: 185 RRDGRELQRMSDSPYA 200


>gi|299139123|ref|ZP_07032299.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
 gi|298598803|gb|EFI54965.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
          Length = 666

 Score = 98.9 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 98/286 (34%), Gaps = 64/286 (22%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI---LAPRFSSNGKRALI 274
             SPN   +A+   D ED   +++ +       K +    +      +P +S + +    
Sbjct: 39  AISPNGSTLAWTLRDREDS-TIHVAELAHFGDAKLVTPHGTSDCASGSPVWSPDSQTLAF 97

Query: 275 SVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF----ESDREG 324
           +        K +   I+     +   ++LT+        ++SPD  QI F     + R  
Sbjct: 98  TSSCTGKDAKTDQEQIFLWSKATGEIKQLTHVTGNIEQPAWSPDGKQIAFLFVKNATRSA 157

Query: 325 ------KEQLYVMQSNGSDQKRI----SQDKEASY--------FDPVWSPQGDLIAFTKF 366
                 K    V+  +G + +++    + D + ++        ++  WSP    +AF   
Sbjct: 158 GALDAMKPWDGVIGEDGVEIQQVYAVSTTDGQENWETAPSLHVYEFAWSPDSRQVAFIAA 217

Query: 367 SG---EKFAIG------------------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +      + +                   V+  D +     +    +  P WSP G+ + 
Sbjct: 218 NPPGENNWWVAKLYAQTVLPRGEQPHQEPVVVLDPNTVTGPLHGLQIAVPRWSPDGKRIA 277

Query: 406 F---SRKKDGDTGSKLYSIDLNGRNETLIN-----TPAYASDPQWV 443
                    G TG  ++ +D+ G + T I      TP +     W+
Sbjct: 278 LIGGLMSDQGSTGGDVWVVDVKGGDPTDITPNIDGTPGFE---AWI 320



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 81/265 (30%), Gaps = 54/265 (20%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT----RIDRAPKRIGNFRSMILAPRF 265
            D     P +SP+ Q +A+ +       +          +     K++ +    I  P +
Sbjct: 79  SDCASGSPVWSPDSQTLAFTSSCTGKDAKTDQEQIFLWSKATGEIKQLTHVTGNIEQPAW 138

Query: 266 SSNGKRALISVQKDEAMDIYSVDL----------QSNATERL-----TNT-LFINISAS- 308
           S +GK+      K+      ++D                +++     T+       + S 
Sbjct: 139 SPDGKQIAFLFVKNATRSAGALDAMKPWDGVIGEDGVEIQQVYAVSTTDGQENWETAPSL 198

Query: 309 ------YSPDSSQIVF-ESDREGKEQLYV-------MQSNGSDQKR----------ISQD 344
                 +SPDS Q+ F  ++  G+   +V       +   G    +          ++  
Sbjct: 199 HVYEFAWSPDSRQVAFIAANPPGENNWWVAKLYAQTVLPRGEQPHQEPVVVLDPNTVTGP 258

Query: 345 KEASYFD-PVWSPQGDLIA-----FTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPT 396
                   P WSP G  IA      +        + V+   G     +    D       
Sbjct: 259 LHGLQIAVPRWSPDGKRIALIGGLMSDQGSTGGDVWVVDVKGGDPTDITPNIDGTPGFEA 318

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
           W    +S+ F   + G T    Y++
Sbjct: 319 WIND-KSIGFVEDRRGHTVLSDYNV 342



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 34/105 (32%), Gaps = 10/105 (9%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQ----APTWSPSGRSL 404
                SP G  +A+T    E   I V +       +L+           +P WSP  ++L
Sbjct: 36  GAVAISPNGSTLAWTLRDREDSTIHVAELAHFGDAKLVTPHGTSDCASGSPVWSPDSQTL 95

Query: 405 IFSRKKDGDTGS----KLYSID-LNGRNETLINTPAYASDPQWVG 444
            F+    G        +++      G  + L +       P W  
Sbjct: 96  AFTSSCTGKDAKTDQEQIFLWSKATGEIKQLTHVTGNIEQPAWSP 140



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/308 (12%), Positives = 85/308 (27%), Gaps = 64/308 (20%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD-----------DEDILR 238
           +  + +  +    I+ LT     I  +P +SP+ +++A+                +    
Sbjct: 110 QEQIFLWSKATGEIKQLTHVTGNIE-QPAWSPDGKQIAFLFVKNATRSAGALDAMKPWDG 168

Query: 239 VYLMDTRIDRAPKRIGNFRS---MILAP-------RFSSNGKRALISVQKDEAMDIY--- 285
           V   D    +    +           AP        +S + ++           + +   
Sbjct: 169 VIGEDGVEIQQVYAVSTTDGQENWETAPSLHVYEFAWSPDSRQVAFIAANPPGENNWWVA 228

Query: 286 ------------------SVDLQSNATERLTNTLFINISASYSPDSSQIVFE----SDRE 323
                              V L  N      + L I +   +SPD  +I       SD+ 
Sbjct: 229 KLYAQTVLPRGEQPHQEPVVVLDPNTVTGPLHGLQIAV-PRWSPDGKRIALIGGLMSDQG 287

Query: 324 GKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                ++V+   G D   I+ + + +     W      I F +       +         
Sbjct: 288 STGGDVWVVDVKGGDPTDITPNIDGTPGFEAWIND-KSIGFVEDRRGHTVLSDYNVATRS 346

Query: 383 E---------RLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                        V    ++    +S +G  L F +    D   +L++    G     + 
Sbjct: 347 MIPDSVIDLGEATVSGGQIKDAVGFSSNG-VLAFVKSGH-DMAPELWA--GTGDALRQMT 402

Query: 433 TPAYASDP 440
                + P
Sbjct: 403 HLNDGARP 410


>gi|218440184|ref|YP_002378513.1| hypothetical protein PCC7424_3245 [Cyanothece sp. PCC 7424]
 gi|218172912|gb|ACK71645.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 947

 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 54/313 (17%), Positives = 101/313 (32%), Gaps = 42/313 (13%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    +LWDV   K +                HT  D I        G        
Sbjct: 351 ASGSTDKTIKLWDVTKGKLLYTLT-----------GHT--DGISSVSFSPDG-------- 389

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
             +++VSG   N++ + D                +F   FSP+ + VA  + D+     +
Sbjct: 390 --KALVSGSDDNTIILWDVMTGKKLKTLKGHQDSVFSVSFSPDGKTVASGSRDN----TI 443

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L D    +  K +   ++ + +  FS +GK    S   D+ + ++ +  +  + + L  
Sbjct: 444 ILWDVMTGKKLKTLKGHQNWVWSVSFSPDGKTLA-SGSVDKTIILWDI-ARGKSLKTLRG 501

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQG 358
                 S S+SPD   +   S       + +      + + I+     ++     +SP G
Sbjct: 502 HEDKIFSVSFSPDGKTLASAS---ADNTIKLWDIASEN-RVITLKGHQNWVMSVSFSPDG 557

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGS 416
             +A          I +       E            +   SP G++L  S     D   
Sbjct: 558 KTLASGSNDNT---IKLWDVVTGNEIKTFSGHQHLVWSVKISPDGKTLASSSW---DKNI 611

Query: 417 KLYSIDLNGRNET 429
            L+ +  N   +T
Sbjct: 612 ILWDMTTNKEIKT 624



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 89/257 (34%), Gaps = 13/257 (5%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K +L     D    R         ++   FS + + +A  + D      + L D    
Sbjct: 312 QTKIALQQTVYDTIKERTRFKEHQDYIWGVSFSRDGKLLASGSTDK----TIKLWDVTKG 367

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +    +      I +  FS +GK AL+S   D  + ++ V +     + L        S 
Sbjct: 368 KLLYTLTGHTDGISSVSFSPDGK-ALVSGSDDNTIILWDV-MTGKKLKTLKGHQDSVFSV 425

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SPD   +   S       + +       + +  +  +   +   +SP G  +A +   
Sbjct: 426 SFSPDGKTVASGSR---DNTIILWDVMTGKKLKTLKGHQNWVWSVSFSPDGKTLA-SGSV 481

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            +   +  + +  S + L   +  + + ++SP G++L        D   KL+ I    R 
Sbjct: 482 DKTIILWDIARGKSLKTLRGHEDKIFSVSFSPDGKTLA---SASADNTIKLWDIASENRV 538

Query: 428 ETLINTPAYASDPQWVG 444
            TL     +     +  
Sbjct: 539 ITLKGHQNWVMSVSFSP 555



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 103/303 (33%), Gaps = 44/303 (14%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            +LWD+    ++I  K            H   + +        G          +++ SG
Sbjct: 527 IKLWDIASENRVITLK-----------GHQ--NWVMSVSFSPDG----------KTLASG 563

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              N++ + D    N          +++  + SP+ + +A +++D      + L D   +
Sbjct: 564 SNDNTIKLWDVVTGNEIKTFSGHQHLVWSVKISPDGKTLASSSWDK----NIILWDMTTN 619

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  K     + ++ +   S  GK  L S   D+++ ++ +         L        S 
Sbjct: 620 KEIKTFSKHQDLVSSVSISPAGK-ILASGSNDKSIILWDI-TTGKQLNTLKGHQKAIYSL 677

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S++ D   +   SD     ++ +         +I +  + + +    SP G ++A    S
Sbjct: 678 SFNKDGKILASGSD---DHRIILWNVTTGKPLKILKGHQEAVYSISLSPDGKILA----S 730

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G    I +      +     +++     +   SP G+ L         T   +   D+  
Sbjct: 731 GTNKNIILWDVTTGKPIKSFKENKEIIYSISLSPDGKILA------SGTNKNIILWDVTT 784

Query: 426 RNE 428
             +
Sbjct: 785 GKK 787



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 90/266 (33%), Gaps = 29/266 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    S+ + D              + ++   F+ + + +A  + D     R+ L +  
Sbjct: 646 SGSNDKSIILWDITTGKQLNTLKGHQKAIYSLSFNKDGKILASGSDDH----RIILWNVT 701

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
             +  K +   +  + +   S +GK            +I   D+ +    +       I 
Sbjct: 702 TGKPLKILKGHQEAVYSISLSPDGKILA----SGTNKNIILWDVTTGKPIKSFKENKEII 757

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S S SPD   +         + + +       +    +  +   F   WS    ++A  
Sbjct: 758 YSISLSPDGKILA----SGTNKNIILWDVTTGKKLGTLEGHQELVFSLSWSEDRKILASG 813

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +      + +      +E   ++     + + ++SP G+++        D   KL+ ID
Sbjct: 814 SYDNT---LKLWDIATRKELKTLKGHQSVINSVSFSPDGKTVA---SGSADKTVKLWDID 867

Query: 423 LNGRNET-------LINTPAYASDPQ 441
             G+          L+N+ +++ D +
Sbjct: 868 -TGKPLKTFWGHQDLVNSVSFSPDGK 892



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 92/295 (31%), Gaps = 43/295 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+++  G +   +   LWD+   KQ+   K            H  +  IY     + G  
Sbjct: 641 GKILASGSNDKSI--ILWDITTGKQLNTLK-----------GHQKA--IYSLSFNKDGKI 685

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                       SG   + + + +        +     + ++    SP+ + +A      
Sbjct: 686 L----------ASGSDDHRIILWNVTTGKPLKILKGHQEAVYSISLSPDGKILA-----S 730

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L D    +  K     + +I +   S +GK            +I   D+ +  
Sbjct: 731 GTNKNIILWDVTTGKPIKSFKENKEIIYSISLSPDGKILA----SGTNKNIILWDVTTGK 786

Query: 294 -TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L     +  S S+S D   +   S       L +       + +  +  ++     
Sbjct: 787 KLGTLEGHQELVFSLSWSEDRKILASGSY---DNTLKLWDIATRKELKTLKGHQSVINSV 843

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
            +SP G  +A          + +   D  +           + + ++SP G++++
Sbjct: 844 SFSPDGKTVASGSADKT---VKLWDIDTGKPLKTFWGHQDLVNSVSFSPDGKTVV 895


>gi|159898085|ref|YP_001544332.1| WD40 domain-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159891124|gb|ABX04204.1| WD40 domain protein beta propeller [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 375

 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 60/308 (19%), Positives = 107/308 (34%), Gaps = 62/308 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            ++LFV     SG       +   +G   R +T S  +  ++P +SP+  K+AY    +E
Sbjct: 57  GKLLFVRVENGSGD------IWVHEGTEARRITTSHKK--YQPSWSPDGSKIAYIQ-REE 107

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILA--------------PRFSSNGKRALISVQK-- 278
               +++M+       +   N  + I A              PR+S +G+      Q   
Sbjct: 108 SFADIWVMNANGSNKQQVTNNEPTNIAARSEDHIQTLRWAFYPRWSPDGQFLSYVSQAQT 167

Query: 279 ----DEAMDIYSVDLQSNATERLTNTLFINIS-------------ASYSPDSSQIVFE-S 320
                     Y + L    T R+    F   S              ++S D + IV+  +
Sbjct: 168 PRDVGGGYQEYPLSLYIYGTRRIGTGQFPEASFQRFVQADTDLSHPTWSDDGTMIVYSQA 227

Query: 321 DR-------EGKEQLYVMQSNGSD-----QKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +R       E +    V+   G +      +  S+D      DP +SP G  + FTK   
Sbjct: 228 ERCFGCEAAEIQLGYAVLDLPGGNDEYGVLQGPSEDTFKGAIDPSFSPDGKWLTFTKSEN 287

Query: 369 EKFAIGVMKKDGSQERL------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               + ++    +  ++      L      +  TWSP G  L F    D      +  + 
Sbjct: 288 GYSDVFIVPAPDTNGKVRSAPIKLTSTGRSRQATWSPDGTKLAFFTISD-QVTLSIADLT 346

Query: 423 LNGRNETL 430
           + G   +L
Sbjct: 347 IEGSTPSL 354



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 98/277 (35%), Gaps = 57/277 (20%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S    K+ +   ++     +++ +       +RI         P +S +G +     +++
Sbjct: 53  SNVPGKLLFVRVENGSG-DIWVHE---GTEARRITTSHKK-YQPSWSPDGSKIAYIQREE 107

Query: 280 EAMDIYSVDLQSNATERLTNTLFINIS---------------ASYSPDSSQIVFES---- 320
              DI+ ++   +  +++TN    NI+                 +SPD   + + S    
Sbjct: 108 SFADIWVMNANGSNKQQVTNNEPTNIAARSEDHIQTLRWAFYPRWSPDGQFLSYVSQAQT 167

Query: 321 --DREGKEQLYVMQSNGSDQKRISQDK------------EASYFDPVWSPQGDLIAFTK- 365
             D  G  Q Y +       +RI   +            +     P WS  G +I +++ 
Sbjct: 168 PRDVGGGYQEYPLSLYIYGTRRIGTGQFPEASFQRFVQADTDLSHPTWSDDGTMIVYSQA 227

Query: 366 -------FSGEKFAIGVMKKDGSQ-----ERLLVEDSNLQA--PTWSPSGRSLIFSRKKD 411
                   +  +    V+   G        +   ED+   A  P++SP G+ L F++ ++
Sbjct: 228 ERCFGCEAAEIQLGYAVLDLPGGNDEYGVLQGPSEDTFKGAIDPSFSPDGKWLTFTKSEN 287

Query: 412 GDTGSKLY-SIDLNGRNETL---INTPAYASDPQWVG 444
           G +   +  + D NG+  +    + +   +    W  
Sbjct: 288 GYSDVFIVPAPDTNGKVRSAPIKLTSTGRSRQATWSP 324


>gi|291294725|ref|YP_003506123.1| WD40 domain-containing protein beta Propeller [Meiothermus ruber
           DSM 1279]
 gi|290469684|gb|ADD27103.1| WD40 domain protein beta Propeller [Meiothermus ruber DSM 1279]
          Length = 901

 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 97/245 (39%), Gaps = 16/245 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV---YLMDTRIDRAPKRIGNFR 257
            N R L          P++SP+ + + + T        V        R++   +R+    
Sbjct: 329 ENERELLNG---PAQHPQWSPDGRYLLFTTSSATSPYFVASDLYQYDRLEGRVQRLTQGE 385

Query: 258 SMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDS 313
            +  A R++ +GK   ++    D + ++    ++ N T+ L +    +    S + +PD 
Sbjct: 386 RVYYA-RYAPDGKSIFLAKNTPDGSTELARYFIEFNRTQPLRSFPHQDGVIHSFAVAPDG 444

Query: 314 SQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +V     R G + LY           ++QD+     DPV+SP G  + ++      + 
Sbjct: 445 RSLVLALLRRGGFQDLYRYTLETGALAPLTQDRNV-DSDPVFSPDGRYVIYSSDVNRVYN 503

Query: 373 IGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +   +  DG+  ++    +    PT+S S + +IFS     +TG  LY +  N      +
Sbjct: 504 LYAYRLEDGAVFQVTNLLTGAFQPTFSHSQQQIIFSGYD--ETGYNLYQLPYNPSAWKRV 561

Query: 432 NTPAY 436
             P  
Sbjct: 562 ELPRE 566



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 68/168 (40%), Gaps = 1/168 (0%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + + +F++++   G  + +   ++ +        P +D ++     +P+ + +  A    
Sbjct: 395 DGKSIFLAKNTPDGSTELARYFIEFNRTQPLRSFPHQDGVIHSFAVAPDGRSLVLALLRR 454

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                +Y            +   R++   P FS +G+  + S   +   ++Y+  L+  A
Sbjct: 455 GGFQDLYRYTLETGALA-PLTQDRNVDSDPVFSPDGRYVIYSSDVNRVYNLYAYRLEDGA 513

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             ++TN L      ++S    QI+F    E    LY +  N S  KR+
Sbjct: 514 VFQVTNLLTGAFQPTFSHSQQQIIFSGYDETGYNLYQLPYNPSAWKRV 561


>gi|153002995|ref|YP_001377320.1| peptidase S9 prolyl oligopeptidase [Anaeromyxobacter sp. Fw109-5]
 gi|152026568|gb|ABS24336.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Anaeromyxobacter sp. Fw109-5]
          Length = 687

 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 90/287 (31%), Gaps = 61/287 (21%)

Query: 217 PRFSPNQQKVAYATYD----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           P  SP+   +A+         + I+    +      A +++ +    I +PRFS +GKR 
Sbjct: 35  PELSPDGTLLAFTVGRLTGAGDRIVSTLYVAPAAGGASRQLTDRDERISSPRFSPDGKRL 94

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--------- 323
                +  A   + +DL S      +         S++PD + ++  +D +         
Sbjct: 95  AFVSTRSGAPQAHVLDLASGQIRVASALPGGANELSWTPDGAALLVTADVDPRCGADAGC 154

Query: 324 ---------GKEQLYV--------------------MQSNGSDQKRISQDK-------EA 347
                    GK ++                      +  +G     ++            
Sbjct: 155 NAKAEAEAKGKPRVATRLLFRHWNAWRERLRTHVLKVPLDGGAPSDLTPGDRDAPPAVRG 214

Query: 348 SYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPS 400
              D   SP G  + FT              +  +   G + R +        +P  SP 
Sbjct: 215 GPGDLAVSPDGKTLYFTAVDDALEAASTNADVFAVPLAGGEARRVTSGPGWDASPRPSPD 274

Query: 401 GRSLIFSRKKDGDTGS---KLYSIDLNGRNETLINTPAY--ASDPQW 442
           G+ L +  +  G   S   ++    ++G++   +       ASD  W
Sbjct: 275 GKRLAWLSQARGGYESDRVRVMVAGIDGKDARDLTAGVDLSASDLHW 321



 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 77/240 (32%), Gaps = 59/240 (24%)

Query: 260 ILAPRFSSNGKRALISVQK-DEAMD-----IYSVDLQSNATERLTNTLFINISASYSPDS 313
           + AP  S +G     +V +   A D     +Y       A+ +LT+      S  +SPD 
Sbjct: 32  VGAPELSPDGTLLAFTVGRLTGAGDRIVSTLYVAPAAGGASRQLTDRDERISSPRFSPDG 91

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG--------------- 358
            ++ F S R G  Q +V+        R++        +  W+P G               
Sbjct: 92  KRLAFVSTRSGAPQAHVLDLASGQI-RVASALPGGANELSWTPDGAALLVTADVDPRCGA 150

Query: 359 -------------------DLIAFTKFSGEKFAIGV----MKKDGSQERLLVEDSNLQAP 395
                                + F  ++  +  +      +  DG     L        P
Sbjct: 151 DAGCNAKAEAEAKGKPRVATRLLFRHWNAWRERLRTHVLKVPLDGGAPSDLTPGDRDAPP 210

Query: 396 ---------TWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLINT-PAYASDPQ 441
                      SP G++L F+   D      T + ++++ L G     + + P + + P+
Sbjct: 211 AVRGGPGDLAVSPDGKTLYFTAVDDALEAASTNADVFAVPLAGGEARRVTSGPGWDASPR 270



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 58/161 (36%), Gaps = 19/161 (11%)

Query: 264 RFSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             S +GK    +   D         D+++V L      R+T+    + S   SPD  ++ 
Sbjct: 220 AVSPDGKTLYFTAVDDALEAASTNADVFAVPLAGGEARRVTSGPGWDASPRPSPDGKRLA 279

Query: 318 FESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           + S   G       ++ V   +G D + ++   + S  D  W+ +G  + F   +     
Sbjct: 280 WLSQARGGYESDRVRVMVAGIDGKDARDLTAGVDLSASDLHWARKGGALRFVALTSGYHE 339

Query: 373 IGVMKKDGSQERLLVEDS--------NLQAPTWSPSGRSLI 405
           +  +     +   L            N+Q+ ++S  G  + 
Sbjct: 340 VYEVDVRSGELVKLAGAPALAGRPRVNVQSVSYSADGARVA 380


>gi|317140077|ref|XP_003189233.1| NACHT and WD40 domain protein [Aspergillus oryzae RIB40]
          Length = 1227

 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 65/354 (18%), Positives = 114/354 (32%), Gaps = 66/354 (18%)

Query: 76   SDVFNLISQDSFKQKITNPDSIPRFQDWN-SLGAQVLV-------TGRVI------KEGK 121
            S +F         Q I +       + W+ + G Q+ V          V+          
Sbjct: 889  SGLFPPDD-----QMIASGSKANTVKLWDPNTGQQLRVLEGHSDSVASVVFSFDSHIIAS 943

Query: 122  DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                   +LWD K  KQ+             +     SD +                  S
Sbjct: 944  GSYDRTIKLWDSKTGKQL-------------RTLDGHSDSVVSVAFSPD----------S 980

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + VVSG   N++ + D +              +    FSP+ Q VA  +YD+     + L
Sbjct: 981  QLVVSGSDDNTIKLWDSNTGQQLRTMRGHSDWVQSVAFSPDGQLVASGSYDN----TIML 1036

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNT 300
             DT   +  + +    S++ A  FS +G     S   D+ + ++  + ++      L   
Sbjct: 1037 WDTNTGQHLRTLKGHSSLVGAVAFSPDGHMIA-SGSYDKTVKLW--NTKTGQQLRTLEGH 1093

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              I  S ++ PDS  +   S       + +  +    + R  +          +SP   +
Sbjct: 1094 SGIVRSVTFLPDSQTVASGSY---DSTIKLWDTTTGLELRTIRGHSGPVRSVSFSPDSPM 1150

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSP-------SGRSLIF 406
            IA   +      I +      Q   L    +  +P T+SP        GR  IF
Sbjct: 1151 IASGSYDNT---IKLWDTKTGQH--LRTLGDHSSPVTFSPEKAKPGSMGRKYIF 1199


>gi|170728218|ref|YP_001762244.1| peptidase S41 [Shewanella woodyi ATCC 51908]
 gi|169813565|gb|ACA88149.1| peptidase S41 [Shewanella woodyi ATCC 51908]
          Length = 1079

 Score = 98.9 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 76/217 (35%), Gaps = 32/217 (14%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           Q K+A+    D     +Y+ + +  +   RI +  +   AP  S +G+    +   +   
Sbjct: 31  QNKIAFVYAGD-----IYVSN-KQGQQVTRITSHAANEYAPHLSPDGQWIAFTADYEGNN 84

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQ 338
           D+Y V       +RLT     +    +SPD   ++F S R+       QL+ +   G   
Sbjct: 85  DVYIVPATGGQPKRLTWHPGTDEVRGWSPDGKSVLFTSRRDIAHNRTGQLFSVAIQGGFP 144

Query: 339 KRISQDKEASYFDPVWSPQGDLIAF--------------TKFSGEKFAIGVMKKD-GSQE 383
              ++  EA   D   +  G  +A+                  G    + +   +  S  
Sbjct: 145 ---TKVMEAVVSDGKMNADGSKLAYNPERLAHGGKNGWRNHRGGTTPPVWIYDLNKNSYV 201

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +   + +  +P W   G  + F   +       +YS
Sbjct: 202 EVPHGNFSDSSPMWV--GEDIYFISDRSKHK--NIYS 234



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 83/258 (32%), Gaps = 16/258 (6%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D    +  G    F           ++G  K     +  D    R         L   + 
Sbjct: 250 DVANANAFGSDIVFEKGGAIFLLDTLTGNSKQLNIDIKVDLPQRRTQFKDAMPSLSSSQI 309

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQK 278
           S   ++V  +     ++  V + D         + N          +S  G++      K
Sbjct: 310 SATGKQVLLSA--RGEVFSVPVKDGSTYN----LTNTSGQNERDALWSPLGEQIAYITDK 363

Query: 279 DEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                +   D Q    ++   L          S+ PD   IVF    +    L++++   
Sbjct: 364 GGDYRLVLAD-QFGEVQKTLDLGKHTADFYLFSWMPDGKHIVFG---DSNMALWLIELKS 419

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVED-SNLQ 393
             + ++ ++   + +D V SP    +A+T+ +      + +          + +  S+  
Sbjct: 420 GKKTKVMKNIAMTSYDVVSSPDSKWLAYTRNNTNYLRDLYLYNIKDKSHHKITDGMSDNA 479

Query: 394 APTWSPSGRSLIFSRKKD 411
            P +SP G+ L F+   +
Sbjct: 480 EPVFSPDGQYLYFASSTN 497



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 100/284 (35%), Gaps = 43/284 (15%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +  E     ++I FV            + V ++ G  +  +T S     + P  SP+ Q 
Sbjct: 23  LLQEPSIAQNKIAFV--------YAGDIYVSNKQGQQVTRIT-SHAANEYAPHLSPDGQW 73

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD----EA 281
           +A+   D E    VY++       PKR+           +S +GK  L + ++D      
Sbjct: 74  IAFTA-DYEGNNDVYIV-PATGGQPKRLTWHPGTDEVRGWSPDGKSVLFTSRRDIAHNRT 131

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------------SDREG-KEQ 327
             ++SV +Q     ++     +      + D S++ +              + R G    
Sbjct: 132 GQLFSVAIQGGFPTKVM--EAVVSDGKMNADGSKLAYNPERLAHGGKNGWRNHRGGTTPP 189

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +++   N +    +      S   P+W   G+ I F     +   I   K+   Q   + 
Sbjct: 190 VWIYDLNKNSYVEV-PHGNFSDSSPMWV--GEDIYFISDRSKHKNIYSFKQ--GQVEQVT 244

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETL 430
             +       +  G  ++F      + G  ++ +D L G ++ L
Sbjct: 245 HFNQWDVANANAFGSDIVF------EKGGAIFLLDTLTGNSKQL 282



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 97/298 (32%), Gaps = 34/298 (11%)

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
           + +  F  W+   A    +  V ++G         L D                   R+ 
Sbjct: 241 EQVTHFNQWDVANANAFGSDIVFEKGG-----AIFLLDTLTGNSKQLNIDIKVDLPQRRT 295

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESV----VSGIIKNSLCVMDRDGANIRYLTPSR 210
                 D   S++  +     + + +S       V     ++  + +  G N R      
Sbjct: 296 QFK---DAMPSLSSSQISATGKQVLLSARGEVFSVPVKDGSTYNLTNTSGQNERDAL--- 349

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
                   +SP  +++AY T    D   V        +    +G   +      +  +GK
Sbjct: 350 --------WSPLGEQIAYITDKGGDYRLVLADQFGEVQKTLDLGKHTADFYLFSWMPDGK 401

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGK-E 326
             +     D  M ++ ++L+S    ++   +     ++    SPDS  + +  +      
Sbjct: 402 HIVF---GDSNMALWLIELKSGKKTKVMKNIAMTSYDV--VSSPDSKWLAYTRNNTNYLR 456

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            LY+         +I+ D  +   +PV+SP G  + F   + +      +    SQER
Sbjct: 457 DLYLYNIKDKSHHKIT-DGMSDNAEPVFSPDGQYLYFASSTNKGLTAFGLDLS-SQER 512



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 64/167 (38%), Gaps = 10/167 (5%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDE 234
           +I ++++          L + D+ G   + L   +    F    + P+ + + +     +
Sbjct: 356 QIAYITDKGGD----YRLVLADQFGEVQKTLDLGKHTADFYLFSWMPDGKHIVF----GD 407

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNA 293
             + ++L++ +  +  K + N          S + K    +      + D+Y  +++  +
Sbjct: 408 SNMALWLIELKSGKKTKVMKNIAMTSYDVVSSPDSKWLAYTRNNTNYLRDLYLYNIKDKS 467

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             ++T+ +  N    +SPD   + F S        + +  +  ++ +
Sbjct: 468 HHKITDGMSDNAEPVFSPDGQYLYFASSTNKGLTAFGLDLSSQERPQ 514



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 98/286 (34%), Gaps = 41/286 (14%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G     + + D +  N     P  +     P +    + + + +   +    +Y  
Sbjct: 180 RNHRGGTTPPVWIYDLN-KNSYVEVPHGNFSDSSPMWV--GEDIYFISDRSKH-KNIYSF 235

Query: 243 DTRIDRAPKRIGNFRSMILAPR--FSSN-----GKRALISVQKDEAMDIYSVDLQSNATE 295
                   +++ +F    +A    F S+     G    +           ++D++ +  +
Sbjct: 236 K---QGQVEQVTHFNQWDVANANAFGSDIVFEKGGAIFLLDTLTGNSKQLNIDIKVDLPQ 292

Query: 296 RLTNTLFINISAS-----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           R T     +   S      S    Q V  S R    +++ +         ++     +  
Sbjct: 293 RRTQFK--DAMPSLSSSQISATGKQ-VLLSARG---EVFSVPVKDGSTYNLTNTSGQNER 346

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFS 407
           D +WSP G+ IA+    G  + + +  + G  ++ L      ++    +W P G+ ++F 
Sbjct: 347 DALWSPLGEQIAYITDKGGDYRLVLADQFGEVQKTLDLGKHTADFYLFSWMPDGKHIVF- 405

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTP--------AYASDPQWVGF 445
               GD+   L+ I+L    +T +             + D +W+ +
Sbjct: 406 ----GDSNMALWLIELKSGKKTKVMKNIAMTSYDVVSSPDSKWLAY 447


>gi|254417311|ref|ZP_05031054.1| hypothetical protein MC7420_8080 [Microcoleus chthonoplastes PCC
            7420]
 gi|196175849|gb|EDX70870.1| hypothetical protein MC7420_8080 [Microcoleus chthonoplastes PCC
            7420]
          Length = 1620

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 96/237 (40%), Gaps = 21/237 (8%)

Query: 199  DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            D    R        I+++  FSP+ + +A A+ D    ++++  D         +   + 
Sbjct: 996  DSITERNRLEGHSDIVWDVSFSPDGELIASASRD--RTVKLWRPD---GTLVTTLQGHQD 1050

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             I +  FS + +    S   D  + ++  D      + LT       S  +SPD   +  
Sbjct: 1051 SITSVSFSPDSQLIA-SSSWDGTVKLWRRD--GTLVQTLTGHKGYVYSVRFSPDGEHLA- 1106

Query: 319  ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             +  +G  +L+ +  +G     +S  K+A+ +   +SP G+++A    +G    I +  K
Sbjct: 1107 STGADGTVRLWRV--DGELIHTLSAHKKAAQWV-SFSPNGEMLA---SAGSDQTIKLWTK 1160

Query: 379  DGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            DG   + L      + +  +SP G+ +  +     D   KL+  D  G+    ++ P
Sbjct: 1161 DGQLWKTLTGHQGKVNSVAFSPDGKFIASASD---DRTVKLW--DTQGKLIKTLSQP 1212



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 100/288 (34%), Gaps = 34/288 (11%)

Query: 140  IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            + +   S     R   H  SD ++       G+           + S     ++ +   D
Sbjct: 991  LSQAVDSITERNRLEGH--SDIVWDVSFSPDGEL----------IASASRDRTVKLWRPD 1038

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G  +  L   +D I     FSP+ Q +A +++D    ++++  D       + +   +  
Sbjct: 1039 GTLVTTLQGHQDSITSV-SFSPDSQLIASSSWD--GTVKLWRRD---GTLVQTLTGHKGY 1092

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + + RFS +G+    S   D  + ++ VD        L+         S+SP+   +   
Sbjct: 1093 VYSVRFSPDGEHLA-STGADGTVRLWRVD--GELIHTLSAHKKAAQWVSFSPNGEMLA-- 1147

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                  + + +   +G   K ++   +       +SP G  IA          + +    
Sbjct: 1148 -SAGSDQTIKLWTKDGQLWKTLT-GHQGKVNSVAFSPDGKFIASASDDRT---VKLWDTQ 1202

Query: 380  GSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            G   + L +        T+S   + +  +     D   +L+  + +G+
Sbjct: 1203 GKLIKTLSQPERWVLNVTFSADSQLIAAAS---ADNTVRLW--NRDGK 1245



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 60/334 (17%), Positives = 111/334 (33%), Gaps = 77/334 (23%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSL 193
            D + I    +  +   WR+        + Q++TG KG   S           S     ++
Sbjct: 1060 DSQLIASSSWDGTVKLWRRDG-----TLVQTLTGHKGYVYSVRFSPDGEHLASTGADGTV 1114

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             +   DG  I  L+  +    +   FSPN + +A A  D      + L  T+  +  K +
Sbjct: 1115 RLWRVDGELIHTLSAHKKAAQWV-SFSPNGEMLASAGSDQ----TIKLW-TKDGQLWKTL 1168

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
               +  + +  FS +GK    S   D  + ++  D Q    + L+      ++ ++S DS
Sbjct: 1169 TGHQGKVNSVAFSPDGKFIA-SASDDRTVKLW--DTQGKLIKTLSQPERWVLNVTFSADS 1225

Query: 314  SQIVFES--------DREGK---------------------------------------- 325
              I   S        +R+GK                                        
Sbjct: 1226 QLIAAASADNTVRLWNRDGKLLKTFKGHSDRVTAVSFSPTKQAKETADTLATPVVLASAS 1285

Query: 326  -EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-----EKFAIGVMKKD 379
             ++   +       + I +  +    D  +SP G+ IA           ++F   +   +
Sbjct: 1286 YDKTIKLWELRQQSQLILRGHDDDVRDVTFSPNGERIATASNDKTVKIWDRFGQLLHTLN 1345

Query: 380  GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            G  ER+        + ++SP G  L  S  +DG 
Sbjct: 1346 GHTERI-------YSVSFSPDGERLA-SASRDGT 1371



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 88/217 (40%), Gaps = 19/217 (8%)

Query: 204  RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            + +    D  + +  FSPN +++A A+ D    ++++    R  +    +      I + 
Sbjct: 1300 QLILRGHDDDVRDVTFSPNGERIATASND--KTVKIW---DRFGQLLHTLNGHTERIYSV 1354

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             FS +G+R   S  +D  + ++  + + +  + L++     +  S+SPDS  +V  S R+
Sbjct: 1355 SFSPDGERLA-SASRDGTIRLW--NREGDLIKVLSSHQDWVLDVSFSPDSQTLVSAS-RD 1410

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               +L+          +  +  ++      +SP G ++A          + +  + G   
Sbjct: 1411 KTIKLWTRD---GVLMKTLKGHQSRVNGVTFSPDGQILASASDDQT---VKLWNRQGELL 1464

Query: 384  RLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLY 419
            + L   SN     ++S   + L  +     D   KL+
Sbjct: 1465 KTLKGHSNWVLDVSFSADSQLLASASY---DNTVKLW 1498


>gi|332308770|ref|YP_004436620.1| transcriptional regulator domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332176099|gb|AEE25352.1| transcriptional regulator domain-containing protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 706

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 95/232 (40%), Gaps = 11/232 (4%)

Query: 218 RFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FSP+ +++A + +  D     ++L D    +    +   +  +    +  NG R +   
Sbjct: 321 AFSPDSKQLALSRSASDGMNEDLFLYDLNTQQMEYLVAT-KGRLRGLTWHPNGDRIIYGG 379

Query: 277 QKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           ++    + Y V L+  +T  L  +        S+ P+S ++V+ S RE   +L  +  + 
Sbjct: 380 EESGRRNGYLVSLKDKSTINLNVDGFSY---PSFVPNSHEVVYHS-RENITKLSTLDLSE 435

Query: 336 SDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNL 392
           +    +         Y DP +S + + I F         I     DGS  + L +   +L
Sbjct: 436 TTGATLFPLIHSNYIYKDPHYSEENNSIVFISTESGYEEIWRADPDGSNRKQLTKLKRHL 495

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQWV 443
            +P WS +G+S+ F         S L+ ++L   N T +++       P W+
Sbjct: 496 SSPRWSHNGQSIAFFAPDKKTKRSALFVLNLQEGNLTQLDSEFDQYYRPSWL 547



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 94/246 (38%), Gaps = 13/246 (5%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
              S  +   L + D +   + YL  ++ ++     + PN  ++ Y   +       YL+
Sbjct: 333 RSASDGMNEDLFLYDLNTQQMEYLVATKGRLRGL-TWHPNGDRIIYGGEESGR-RNGYLV 390

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTN 299
             +         +  S    P F  N    +    ++    + ++DL          L +
Sbjct: 391 SLKDKSTINLNVDGFSY---PSFVPNSHEVVYH-SRENITKLSTLDLSETTGATLFPLIH 446

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           + +I     YS +++ IVF S   G E+++    +GS++K++++ K      P WS  G 
Sbjct: 447 SNYIYKDPHYSEENNSIVFISTESGYEEIWRADPDGSNRKQLTKLKRH-LSSPRWSHNGQ 505

Query: 360 LIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGS 416
            IAF       ++ A+ V+         L  + +    P+W      L+   K  G+   
Sbjct: 506 SIAFFAPDKKTKRSALFVLNLQEGNLTQLDSEFDQYYRPSWLRDDSGLLAGAKFKGNLAL 565

Query: 417 KLYSID 422
             + ID
Sbjct: 566 YGFPID 571



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 94/251 (37%), Gaps = 16/251 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRF 265
             S       P  SPN++ + +          +Y+ D    + + K+I    +      +
Sbjct: 165 LTSEPGREVYPTVSPNERYLIFTWRHITGSPNLYIKDLQDKNSSSKQITFTENYEGHAVW 224

Query: 266 SSNGKRALISVQKDEAM--DIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDR 322
             N +      +  +    D+  +++ +    ++ T     + S + S D   + +   +
Sbjct: 225 HPNSEVVFFQRKHWDFKRCDVVQLNIVTMLENKIATCDAEKDFSLTISSDGRFLAYIVKK 284

Query: 323 EGKEQLYV----MQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IG 374
           +  + L V    ++S   + K ++  Q       D  +SP    +A ++ + +     + 
Sbjct: 285 QNDQHLNVKLIDLKSEAMEAKLLACHQKCRFQDLDVAFSPDSKQLALSRSASDGMNEDLF 344

Query: 375 VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +   +  Q   LV     L+  TW P+G  +I+  ++ G      Y + L  ++   +N 
Sbjct: 345 LYDLNTQQMEYLVATKGRLRGLTWHPNGDRIIYGGEESGRRNG--YLVSLKDKSTINLNV 402

Query: 434 PAYASDPQWVG 444
             + S P +V 
Sbjct: 403 DGF-SYPSFVP 412



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 10/151 (6%)

Query: 282 MDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNG--S 336
             +  +   + +++   LT+     +  + SP+   ++F      G   LY+       S
Sbjct: 148 WQLSLLPFATKSSKILNLTSEPGREVYPTVSPNERYLIFTWRHITGSPNLYIKDLQDKNS 207

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD----GSQERLLVEDSNL 392
             K+I+   E      VW P  +++ F +   +     V++ +       +    +    
Sbjct: 208 SSKQITF-TENYEGHAVWHPNSEVVFFQRKHWDFKRCDVVQLNIVTMLENKIATCDAEKD 266

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            + T S  GR L +  KK  D    +  IDL
Sbjct: 267 FSLTISSDGRFLAYIVKKQNDQHLNVKLIDL 297



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 51/141 (36%), Gaps = 9/141 (6%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           + H  S+ IY+       + N+ I+F+S           +   D DG+N + LT  +   
Sbjct: 444 LIH--SNYIYKD--PHYSEENNSIVFISTE----SGYEEIWRADPDGSNRKQLTKLKRH- 494

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           L  PR+S N Q +A+   D +       +    +    ++ +       P +  +    L
Sbjct: 495 LSSPRWSHNGQSIAFFAPDKKTKRSALFVLNLQEGNLTQLDSEFDQYYRPSWLRDDSGLL 554

Query: 274 ISVQKDEAMDIYSVDLQSNAT 294
              +    + +Y   +     
Sbjct: 555 AGAKFKGNLALYGFPIDEKPP 575


>gi|119489647|ref|ZP_01622406.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
 gi|119454384|gb|EAW35533.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
          Length = 1691

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 113/325 (34%), Gaps = 31/325 (9%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-----VSGII 189
            D +QI           W +    I++ I  +++ +       IL +S S       S   
Sbjct: 1051 DGEQIATGGNEKVIKLWNRNGKFITNFIDPALSSQSLSHEDGILGISFSPDGQMMASASR 1110

Query: 190  KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              ++ +  R+G  ++ L      ++   RFSP+ Q +A A+ D      V L +   D  
Sbjct: 1111 DTTVKLWSREGQWLKTL-RGHQAVVTSVRFSPDGQIIASASADG----TVKLWNINSDTP 1165

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---------TNT 300
             K I   +  +L  +FS +G+    S   D  + ++ +D      + L         T  
Sbjct: 1166 IKTINAHKGGVLDVKFSPDGEMIASSGSFDPTVKLWKID--GTRLKTLRGHCESFKQTED 1223

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   S+SPD + +   S   G   + +       +    +          +SP G  
Sbjct: 1224 CIGVYEVSFSPDGAILASAS---GDRTVKLWNVQTGKEIETLKGHNNDVLSVSFSPDGQT 1280

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IA          + +  KDG   +      +++   ++SP    +       GD   KL+
Sbjct: 1281 IASGSRDRT---VKLWNKDGVILQTFTGHKNDVWTVSFSPDSEMIA---SASGDHTVKLW 1334

Query: 420  SIDLNGRNETLINTPAYASDPQWVG 444
              + N  +  L   P   +D  +  
Sbjct: 1335 DRNSNPLDHILQGHPLAVNDVDFSP 1359



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 63/174 (36%), Gaps = 17/174 (9%)

Query: 259  MILAPRFSSNGKRALIS--------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             +LA  +S +G++              ++       +D   ++ + L++   I +  S+S
Sbjct: 1042 SVLAASYSPDGEQIATGGNEKVIKLWNRNGKFITNFIDPALSS-QSLSHEDGI-LGISFS 1099

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            PD   +   S R+   +L+   S      +  +  +A      +SP G +IA     G  
Sbjct: 1100 PDGQMMASAS-RDTTVKLW---SREGQWLKTLRGHQAVVTSVRFSPDGQIIASASADGTV 1155

Query: 371  FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +  +  D   + +      +    +SP G  +        D   KL+ ID  
Sbjct: 1156 -KLWNINSDTPIKTINAHKGGVLDVKFSPDGEMIA--SSGSFDPTVKLWKIDGT 1206



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 49/302 (16%), Positives = 115/302 (38%), Gaps = 39/302 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQI---IGKKFFSSPASWRKIAHTISD---------- 160
            G ++        V  +LW+V+  K+I    G        S+     TI+           
Sbjct: 1236 GAILASASGDRTV--KLWNVQTGKEIETLKGHNNDVLSVSFSPDGQTIASGSRDRTVKLW 1293

Query: 161  ----DIYQSITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
                 I Q+ TG K D  +      SE + S    +++ + DR+   + ++       + 
Sbjct: 1294 NKDGVILQTFTGHKNDVWTVSFSPDSEMIASASGDHTVKLWDRNSNPLDHILQGHPLAVN 1353

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDT----RIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +  FSPN + +A A+ D    +R++  DT    +       +   ++ +     S +G+ 
Sbjct: 1354 DVDFSPNGEIIATASDD--QTVRLWKTDTVQLLKNSDDQPLLLQHQNKVRWVSLSPDGQT 1411

Query: 272  ALISVQKDEAMDIYSV-DLQSN---ATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                   +  +  +++ ++++    + + L     +  +  +SP+   ++     +G+ +
Sbjct: 1412 LATVGTSEPTIQFWTIQNVETGYTASVKTLNGHDSVVNTVEFSPNG--MMASGGEDGRVK 1469

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQER 384
            L+  Q +G+  +  +   +A      +   GDL+A          +  +    K G + R
Sbjct: 1470 LW--QKDGTLIE--TFTLDAPVVSIEFDQTGDLMAIATSDPQTQSQLQLWSQDKTGWRSR 1525

Query: 385  LL 386
             +
Sbjct: 1526 TI 1527


>gi|284990476|ref|YP_003409030.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Geodermatophilus obscurus DSM 43160]
 gi|284063721|gb|ADB74659.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geodermatophilus obscurus DSM 43160]
          Length = 669

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 96/283 (33%), Gaps = 19/283 (6%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T       + +      +     ++ L  +  DG+    L  S      +P FSP+ + +
Sbjct: 16  TVSPDARMAVVAVGRPDLGDDAERSRLWAVPTDGSAPPRLLTSG-WCDTDPVFSPDGRWL 74

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           AY   +     +++L+ T    AP+++         P +S + +R   + +  E +   S
Sbjct: 75  AYRGAERGGPPQLHLLPT-AGGAPRQLPGHPLGAGRPVWSPDARRLAYTARVPE-VHRSS 132

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D        +T   +         D    VF  D                 ++++ D  
Sbjct: 133 ADRAGQPPWLVTTLRWQVDGVGVVTDRHSHVFVLDLPPDTDDDRAPLP--RPRQVT-DGA 189

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQA-PTWSP 399
           A   D  WSP G  +AF      +        +  +   G   R + +     + P + P
Sbjct: 190 ADDADVTWSPDGAELAFVSARHARADRDLVHDVYAVPATGGALRRVTDGRADCSLPAYDP 249

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETL--INTPAYASDP 440
           SG  +  + + D         +D+ GR  TL  +     A +P
Sbjct: 250 SGGWIWLTARLDLGPDG----LDVAGRGATLCRVPVAGGAPEP 288



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 80/241 (33%), Gaps = 61/241 (25%)

Query: 263 PRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P  S + + A+++V + +  D      +++V    +A  RL  + + +    +SPD   +
Sbjct: 15  PTVSPDARMAVVAVGRPDLGDDAERSRLWAVPTDGSAPPRLLTSGWCDTDPVFSPDGRWL 74

Query: 317 VFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            +  ++R G  QL+++ + G   +++          PVWSP    +A+T    E      
Sbjct: 75  AYRGAERGGPPQLHLLPTAGGAPRQL-PGHPLGAGRPVWSPDARRLAYTARVPEVHRSSA 133

Query: 376 MKK--------------DGSQ---------------------------ERLLVEDSNLQA 394
            +               DG                              R + + +   A
Sbjct: 134 DRAGQPPWLVTTLRWQVDGVGVVTDRHSHVFVLDLPPDTDDDRAPLPRPRQVTDGAADDA 193

Query: 395 -PTWSPSGRSLIFSRKKDGDTGSKL----YSIDLNGRNETLINT-------PAYASDPQW 442
             TWSP G  L F   +       L    Y++   G     +         PAY     W
Sbjct: 194 DVTWSPDGAELAFVSARHARADRDLVHDVYAVPATGGALRRVTDGRADCSLPAYDPSGGW 253

Query: 443 V 443
           +
Sbjct: 254 I 254



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 75/253 (29%), Gaps = 48/253 (18%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F+    +++           L ++   G   R L P        P +SP+ +++AY   
Sbjct: 66  VFSPDGRWLAYRGAERGGPPQLHLLPTAGGAPRQL-PGHPLGAGRPVWSPDARRLAYTAR 124

Query: 232 DDE-----------DILRVYLMDTRIDR----------------------------APKR 252
             E               V  +  ++D                              P++
Sbjct: 125 VPEVHRSSADRAGQPPWLVTTLRWQVDGVGVVTDRHSHVFVLDLPPDTDDDRAPLPRPRQ 184

Query: 253 IGNFRSMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           + +  +      +S +G              +D   D+Y+V     A  R+T+       
Sbjct: 185 VTDGAADDADVTWSPDGAELAFVSARHARADRDLVHDVYAVPATGGALRRVTDGRADCSL 244

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFT 364
            +Y P    I   +  +       +   G+   R+     A     DP  + +GD    T
Sbjct: 245 PAYDPSGGWIWLTARLDLGPDGLDVAGRGATLCRVPVAGGAPEPVLDPASTDRGDGTPAT 304

Query: 365 KFSGEKFAIGVMK 377
             +G    +GV +
Sbjct: 305 VLAGGAAHLGVQR 317


>gi|157374478|ref|YP_001473078.1| peptidase S41 [Shewanella sediminis HAW-EB3]
 gi|157316852|gb|ABV35950.1| peptidase S41 [Shewanella sediminis HAW-EB3]
          Length = 1094

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 54/297 (18%), Positives = 121/297 (40%), Gaps = 36/297 (12%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +++R+ FVS+S  +      +  M  DG N++  T   D  +   R   ++ ++ +    
Sbjct: 225 WDNRLYFVSDSDGNDN----IWSMMTDGQNLKQHTQFTDWQVRGARL--DKGRIVFQQGA 278

Query: 233 DEDILRVYLMDTRI----------DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           D  +  +   DTR+           R    + +      + + S  G + +I+ +     
Sbjct: 279 DIKLFDIAANDTRVLDIDLVSDFSQRREHWVNSPMKYATSTQVSPVGDKVVITAR----S 334

Query: 283 DIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGS-DQKR 340
            +    +  +    +       I AS  SPD   +   SD  G+++++   ++GS   K+
Sbjct: 335 HVAIAGVDGSRLVEIALPGNSRIRASVMSPDGQWVYGISDASGEQEIWQFPADGSQGAKQ 394

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
           +++D +        SP G  IA   + G    + ++    ++ + ++       P     
Sbjct: 395 LTKDGKTLRMSLSVSPDGRYIASDDYDG---NLWLLDLKKNRSKKIITQGEGLGPYADVV 451

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN------TPAYASDPQWVGFM 446
           WS   R +  ++ + G    ++    L   R+ET+ +      +PA++SD +W+ F+
Sbjct: 452 WSGDSRFIAITKSELGKPRPQIVLYSLEENRSETVTSDKYESYSPAFSSDGKWLYFL 508



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 110/290 (37%), Gaps = 29/290 (10%)

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR-KQIIGKKF 144
           S      N     +F DW   GA+ L  GR++ +       + +L+D+     +++    
Sbjct: 243 SMMTDGQNLKQHTQFTDWQVRGAR-LDKGRIVFQQG----ADIKLFDIAANDTRVLDIDL 297

Query: 145 FSSPASWRKIAHTISDDI-YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
            S  +  R+  H ++  + Y + T      +  ++           ++ + +   DG+ +
Sbjct: 298 VSDFSQRRE--HWVNSPMKYATSTQVSPVGDKVVI---------TARSHVAIAGVDGSRL 346

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILA 262
             +    +  +     SP+ Q V Y   D      ++       +  K++  + +++ ++
Sbjct: 347 VEIALPGNSRIRASVMSPDGQWV-YGISDASGEQEIWQFPADGSQGAKQLTKDGKTLRMS 405

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFE 319
              S +G+        D   +++ +DL+ N ++++      L       +S DS  I   
Sbjct: 406 LSVSPDGRYIA---SDDYDGNLWLLDLKKNRSKKIITQGEGLGPYADVVWSGDSRFIAIT 462

Query: 320 SDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
               GK   Q+ +     +  + ++ DK  SY  P +S  G  + F    
Sbjct: 463 KSELGKPRPQIVLYSLEENRSETVTSDKYESY-SPAFSSDGKWLYFLSNR 511



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 79/196 (40%), Gaps = 22/196 (11%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               AP  S N    + + + D    +++ +L  +  +RLT+     + AS S D   + 
Sbjct: 31  GYYRAPALSDN--TLVFTAEGD----LWTKELTQSRAQRLTSLPAEELGASISKDGQWVA 84

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           + ++ EG  ++YV+   G   KR+S +  +      W+ +G+++  T  +       V++
Sbjct: 85  YVANYEGASEVYVIPIAGGKAKRVSFE-NSRVRVQGWTAEGEVLYATDNAFGPANYWVLR 143

Query: 378 KDGSQERLLVED---SNLQAPTWSPSGRSLIFSRK-----------KDGDTGSKLYSIDL 423
              + E L+  D   ++        SG  L F+R              G    +L+   L
Sbjct: 144 TV-NPETLMTTDLPLADAIEGAIDDSGEYLYFTRFGLQTTGDNAKVYRGGAKGELWRFKL 202

Query: 424 NGRNETLINTPAYASD 439
             + E  + T +++  
Sbjct: 203 GSKQEAELLTASHSGS 218



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 68/202 (33%), Gaps = 22/202 (10%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +R+ +  +  L    S +G+        + A ++Y + +     +R++       
Sbjct: 57  TQSRAQRLTSLPAEELGASISKDGQWVAYVANYEGASEVYVIPIAGGKAKRVSFENSRVR 116

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              ++ +   +    +  G    +V+++   +    +    A   +      G+ + FT+
Sbjct: 117 VQGWTAEGEVLYATDNAFGPANYWVLRTVNPETLMTTDLPLADAIEGAIDDSGEYLYFTR 176

Query: 366 F-------------SGEKFAIGVMKKDGSQERLL---VEDSNLQAPT-WSPSGRSLIFSR 408
           F              G K  +   K    QE  L       +++ P  W    R L F  
Sbjct: 177 FGLQTTGDNAKVYRGGAKGELWRFKLGSKQEAELLTASHSGSVRQPMLW--DNR-LYFVS 233

Query: 409 KKDGDTGSKLYSIDLNGRNETL 430
             DG     ++S+  +G+N   
Sbjct: 234 DSDG--NDNIWSMMTDGQNLKQ 253



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 70/220 (31%), Gaps = 24/220 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L   +   +  + LT S          S + Q VAY   + E    VY++     +A K
Sbjct: 50  DLWTKELTQSRAQRLT-SLPAEELGASISKDGQWVAYVA-NYEGASEVYVIPIAGGKA-K 106

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--FINISASY 309
           R+    S +    +++ G   L +         Y V    N    +T  L     I  + 
Sbjct: 107 RVSFENSRVRVQGWTAEG-EVLYATDNAFGPANYWVLRTVNPETLMTTDLPLADAIEGAI 165

Query: 310 SPDSSQIVFES------------DREG-KEQLYVMQSNGS-DQKRISQDKEASYFDPV-W 354
                 + F               R G K +L+  +     + + ++     S   P+ W
Sbjct: 166 DDSGEYLYFTRFGLQTTGDNAKVYRGGAKGELWRFKLGSKQEAELLTASHSGSVRQPMLW 225

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
               + + F   S     I  M  DG   +   + ++ Q 
Sbjct: 226 ---DNRLYFVSDSDGNDNIWSMMTDGQNLKQHTQFTDWQV 262



 Score = 43.5 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 79/220 (35%), Gaps = 19/220 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + + +A    +        ++ +  +   + + + +    +P FSS+GK     +  
Sbjct: 452 WSGDSRFIAITKSELGKPRPQIVLYSLEENRSETVTSDKYESYSPAFSSDGKWLYF-LSN 510

Query: 279 DEAMDIYSVDLQSNATERLTNTL------FINISASYS---PDSSQIVFESDREGKEQLY 329
            +     +          + +         ++ SAS++   P+      ESD++  ++  
Sbjct: 511 RQFTATPTSPWGDRNMGPMFDKRSEIFAIALDKSASFAFRKPNELMPA-ESDKKSDKEAD 569

Query: 330 VMQSN---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQE 383
            ++ N       +R+ Q    S      S + D +     +  +     + V+K D    
Sbjct: 570 KLKINVDWKGLNQRLWQVPVGSGNYSKLSLKEDSLYLLDRASGRSSKPDLKVIKFDPLSP 629

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           ++     ++     S  G+ +   +  +G  G ++  +D 
Sbjct: 630 KVETFAKDVGDYALSADGKKIFIRKHSNG--GKEMLIVDA 667


>gi|322419862|ref|YP_004199085.1| surface antigen (D15) [Geobacter sp. M18]
 gi|320126249|gb|ADW13809.1| surface antigen (D15) [Geobacter sp. M18]
          Length = 974

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 58/370 (15%), Positives = 104/370 (28%), Gaps = 74/370 (20%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH--TISDDIYQSITGEKGDFN 174
              G       +RL      ++ I + + +  A    +AH       I +          
Sbjct: 224 WPSGNLPYIYGYRL------QRYIAETYGNDAAGRLSLAHAGRFPYTISRPAKTNFDGNT 277

Query: 175 SRILFVSESVV-SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            R ++              + V+ R             + L  PRFSP+  ++A+   D 
Sbjct: 278 YREVYQDMIASLKDEQSKRIAVLSRQPFTPLTTIYDEGENLVSPRFSPDGSRIAFTRRDP 337

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALIS---VQKDEAM--DIYS 286
            D   V + D       + + +FR      +  +S +G+    +   V +   +  D+Y 
Sbjct: 338 HDHTSVVVTDASGQ---QVLASFRRQYSDGSLSWSPDGRSIFFTQAEVNRGFNLYQDLYV 394

Query: 287 VDLQSNATERLTNT----------------------------------------LFINIS 306
            DL+   T RLT                                               S
Sbjct: 395 YDLERRHTTRLTEGERLGDVQLSPDGKRFAAVVSSRGSQNLVLLDAEAPNGKLKPAPVTS 454

Query: 307 --------ASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                     +SPDS  I +  +D  G   L +          +      +     WSP 
Sbjct: 455 YSEERVSGPRWSPDSRSICYVLTDNAGNSTLRIYDLAAKSDAPLLSAG-HTLAHQAWSPD 513

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           G +I +       F +        +      L+  +    P  SP GR ++ ++      
Sbjct: 514 GSVIYYVSDETGVFNLFAYDLREQKSYQVSHLLAGALQPEP--SPDGRRVVLAKYTSRGF 571

Query: 415 GSKLYSIDLN 424
                 ID  
Sbjct: 572 KIAQMQIDRT 581



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 77/213 (36%), Gaps = 5/213 (2%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + R +F +++ V+        +   D         +  + L + + SP+ ++ A      
Sbjct: 371 DGRSIFFTQAEVNRGFNLYQDLYVYDLERRHTTRLTEGERLGDVQLSPDGKRFAAVVSSR 430

Query: 234 EDILRVYLMDTRIDRA--PKRIGNF-RSMILAPRFSSNGKRALISVQKD-EAMDIYSVDL 289
                V L     +    P  + ++    +  PR+S + +     +  +     +   DL
Sbjct: 431 GSQNLVLLDAEAPNGKLKPAPVTSYSEERVSGPRWSPDSRSICYVLTDNAGNSTLRIYDL 490

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            + +   L +        ++SPD S I + SD  G   L+          ++S     + 
Sbjct: 491 AAKSDAPLLSAGHTLAHQAWSPDGSVIYYVSDETGVFNLFAYDLREQKSYQVSHLLAGAL 550

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             P  SP G  +   K++   F I  M+ D +Q
Sbjct: 551 -QPEPSPDGRRVVLAKYTSRGFKIAQMQIDRTQ 582



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 68/318 (21%), Positives = 102/318 (32%), Gaps = 40/318 (12%)

Query: 160 DDIYQSITGEKGDFNSR-------ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
             ++  +T     F  R           S+    G  K S   M    A      PS DQ
Sbjct: 157 SAVFFLVTAPPNTFMPRWWHEGMATYAESKYTGQGRGKGSYYDMIFRTAVAEGNLPSVDQ 216

Query: 213 ILFE-PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSN 268
           I  + P +        Y       I   Y  D     +    G F   I  P    F  +
Sbjct: 217 INGDIPNWPSGNLPYIYGYRLQRYIAETYGNDAAGRLSLAHAGRFPYTISRPAKTNF--D 274

Query: 269 GKR-------ALISVQKDEAMDIYSVDLQSNATERLTN--TLFIN-ISASYSPDSSQIVF 318
           G          + S++ +++  I  +  Q      LT       N +S  +SPD S+I F
Sbjct: 275 GNTYREVYQDMIASLKDEQSKRIAVLSRQ--PFTPLTTIYDEGENLVSPRFSPDGSRIAF 332

Query: 319 ESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFS-GEKFA---- 372
              R+  +   V+ ++ S Q+ + S  ++ S     WSP G  I FT+      F     
Sbjct: 333 TR-RDPHDHTSVVVTDASGQQVLASFRRQYSDGSLSWSPDGRSIFFTQAEVNRGFNLYQD 391

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + V   +      L E   L     SP G+   F+          L  +D    N  L  
Sbjct: 392 LYVYDLERRHTTRLTEGERLGDVQLSPDGKR--FAAVVSSRGSQNLVLLDAEAPNGKLKP 449

Query: 433 TPA------YASDPQWVG 444
            P         S P+W  
Sbjct: 450 APVTSYSEERVSGPRWSP 467


>gi|289937467|ref|YP_003482069.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
 gi|289533158|gb|ADD07507.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
          Length = 671

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 76/241 (31%), Gaps = 22/241 (9%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +S +  ++A+          +     R    P+R G F     A  +  +G       
Sbjct: 108 PTWSHDGSRLAFYRDGKPRTKSLTDGVERGFDVPER-GPFLGGERAFAWRGDG-LLAYRF 165

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----QLYVMQ 332
              E   +  ++ +S      T     + S  +  D        +R G+     +   + 
Sbjct: 166 TDCETKCVGVINTESGDLVWRTRPDSSSHSPFWLDDGRL---CYERRGEYGTVREFIAVD 222

Query: 333 SNGSDQKRISQ------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +    +              S   P  SP G L+A          I V+     +   L
Sbjct: 223 IDDPATESTLFQEVDEETGALSRGSPRLSPDGTLLAAALPVDGYEHIHVIDVSSGERTQL 282

Query: 387 VEDSN------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            E +          P W    R L+F+  +      +LY++ L+G  E L+ T     +P
Sbjct: 283 TEGAFEDKGLADSTPRWIDDER-LVFASNRRDTGQRQLYTVTLDGTTEPLVETAGTNVEP 341

Query: 441 Q 441
           +
Sbjct: 342 R 342



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 72/180 (40%), Gaps = 20/180 (11%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI----- 260
                D     P +  +  ++ Y    +   +R ++    ID        F+ +      
Sbjct: 185 WRTRPDSSSHSPFWLDDG-RLCYERRGEYGTVREFI-AVDIDDPATESTLFQEVDEETGA 242

Query: 261 ---LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-----INISASYSPD 312
               +PR S +G     ++  D    I+ +D+ S    +LT   F      + +  +  D
Sbjct: 243 LSRGSPRLSPDGTLLAAALPVDGYEHIHVIDVSSGERTQLTEGAFEDKGLADSTPRWI-D 301

Query: 313 SSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             ++VF S+R   G+ QLY +  +G+ +  +  +   +  +P  SP GD +A+   S ++
Sbjct: 302 DERLVFASNRRDTGQRQLYTVTLDGTTEPLV--ETAGTNVEPRPSPAGDHVAYLHASRDR 359



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 82/218 (37%), Gaps = 17/218 (7%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +    P++S     +A   ++D+  +   L+     + P R+      +    +S    +
Sbjct: 19  EWPTAPKWSSCGSFLAATVHEDDGKV---LLVGHPGKEPLRVRPADEHVAEFTWSPTEPQ 75

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            + + +         VD +  +   +  T   +I  ++S D S++ F   R+GK +    
Sbjct: 76  LVCTTEDGLTA---LVDPREQSVSEIARTPDGDILPTWSHDGSRLAF--YRDGKPR--TK 128

Query: 332 QSNGSDQKRISQDKEASYFDP----VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                 ++     +   +        W   G L+A+     E   +GV+  +        
Sbjct: 129 SLTDGVERGFDVPERGPFLGGERAFAWRGDG-LLAYRFTDCETKCVGVINTESGDLVWRT 187

Query: 388 E-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             DS+  +P W   GR L + R+ +  T  +  ++D++
Sbjct: 188 RPDSSSHSPFWLDDGR-LCYERRGEYGTVREFIAVDID 224


>gi|149277359|ref|ZP_01883501.1| peptidase S41 [Pedobacter sp. BAL39]
 gi|149232236|gb|EDM37613.1| peptidase S41 [Pedobacter sp. BAL39]
          Length = 1099

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 80/213 (37%), Gaps = 28/213 (13%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +  R    P+R+    ++   P FS +G +   +   D   DIY + +   + +R+T  
Sbjct: 54  WIAGRDGSNPRRLTVNPAVEQNPIFSPDGTQIAFTGNYDGNTDIYVIPVSGGSPKRITYH 113

Query: 301 LFINISASYSPDSSQIVFESDREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
              ++   +   + Q+ F S R+       +++ ++ +G+ ++ +    EA+   P  S 
Sbjct: 114 PSADVLRGWI-GNDQLYFTSVRDYNFALSPRMHRIKLDGTAEEAL-PMPEAAQGSP--SA 169

Query: 357 QGDL--------------IAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQA-PTWSPS 400
            G                +AF ++ G     I +         ++    +    P W   
Sbjct: 170 DGRYWAYIKNGDPSERANVAFKRYRGGGMPQIWIFDTQTKNIEIIPGPGSNNVKPQWL-- 227

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G ++ F   +  D    +Y  ++  +  T + +
Sbjct: 228 GNTIYFLSDR--DLTMNIYGYEVGSKKTTQLTS 258



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/196 (22%), Positives = 75/196 (38%), Gaps = 20/196 (10%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREG 324
           S  G RAL   +     +I+SV  +      ++N+        ++SPD   I + SD+ G
Sbjct: 323 SPKGVRALFESRG----EIFSVPKEKGDARNISNSPGSYEKFPAWSPDGKYISYLSDKNG 378

Query: 325 KEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-------M 376
             QL +           IS      YF PVWSP    + +       F I +       +
Sbjct: 379 SYQLVLANQATKAAPEYISLGSTPFYFQPVWSPDSKKLFYADAHLNLFYIDINARKPVLV 438

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETL----- 430
           K D           N   P+WSP  + + +      G   + LY++D     +       
Sbjct: 439 KADTESPN-PGRTYNPFNPSWSPDSKWISYVATLPSGVNAAFLYNLDSQTHTQITDGMSD 497

Query: 431 INTPAYASDPQWVGFM 446
           +N P ++ D +++ F+
Sbjct: 498 VNAPTFSRDGKYLFFL 513



 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 44/184 (23%), Positives = 71/184 (38%), Gaps = 25/184 (13%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             DI+      +   RLT    +  +  +SPD +QI F  + +G   +YV+  +G   KR
Sbjct: 50  GGDIWIAGRDGSNPRRLTVNPAVEQNPIFSPDGTQIAFTGNYDGNTDIYVIPVSGGSPKR 109

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI----GVMKKDGSQERLLVED-SNLQAP 395
           I+    A           D + FT      FA+      +K DG+ E  L    +   +P
Sbjct: 110 ITYHPSADVLRGWI--GNDQLYFTSVRDYNFALSPRMHRIKLDGTAEEALPMPEAAQGSP 167

Query: 396 TWSPSGRS--------------LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS-DP 440
             S  GR               + F R + G    +++  D   +N  +I  P   +  P
Sbjct: 168 --SADGRYWAYIKNGDPSERANVAFKRYRGGGM-PQIWIFDTQTKNIEIIPGPGSNNVKP 224

Query: 441 QWVG 444
           QW+G
Sbjct: 225 QWLG 228



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 77/215 (35%), Gaps = 22/215 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP   +  + +  +     ++ +      A     +  S    P +S +GK       K
Sbjct: 322 ISPKGVRALFESRGE-----IFSVPKEKGDARNISNSPGSYEKFPAWSPDGKYISYLSDK 376

Query: 279 DEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + +  +   +  + A      L +T F      +SPDS ++ +    +    L+ +  N 
Sbjct: 377 NGSYQLVLANQATKAAPEYISLGSTPFY-FQPVWSPDSKKLFYA---DAHLNLFYIDINA 432

Query: 336 SDQKRISQDKE-------ASYFDPVWSPQGDLIAFTKFSGEKFAIG-VMKKDGSQERLLV 387
                +  D E        + F+P WSP    I++            +   D      + 
Sbjct: 433 RKPVLVKADTESPNPGRTYNPFNPSWSPDSKWISYVATLPSGVNAAFLYNLDSQTHTQIT 492

Query: 388 ED-SNLQAPTWSPSGRSLIFSRKKD-GDTGSKLYS 420
           +  S++ APT+S  G+ L F    D G T S L+ 
Sbjct: 493 DGMSDVNAPTFSRDGKYLFFLASTDVGLTNSGLHM 527



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 59/373 (15%), Positives = 116/373 (31%), Gaps = 101/373 (27%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R   H  +D +           N ++ F S    +  +   +  +  DG       P  +
Sbjct: 109 RITYHPSADVL------RGWIGNDQLYFTSVRDYNFALSPRMHRIKLDGT-AEEALPMPE 161

Query: 212 QILFEPRFSPNQQ--------------KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
                P  S + +               VA+  Y    + ++++ DT+  +  + I    
Sbjct: 162 AAQGSP--SADGRYWAYIKNGDPSERANVAFKRYRGGGMPQIWIFDTQT-KNIEIIPGPG 218

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL---------------- 301
           S  + P++   G        +D  M+IY  ++ S  T +LT+                  
Sbjct: 219 SNNVKPQWL--GNTIYFLSDRDLTMNIYGYEVGSKKTTQLTSYKDYDVKSLNAANGTVAF 276

Query: 302 ---------------------------------FINISA-----SYSPDSSQIVFESDRE 323
                                            ++++SA       SP   + +FES   
Sbjct: 277 EQAGRIHLMDATSHQVKDLSISIQADVPYKRPHYVDMSADIRNSEISPKGVRALFES--- 333

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-- 381
            + +++ +     D + IS    +    P WSP G  I++       + + +  +     
Sbjct: 334 -RGEIFSVPKEKGDARNISNSPGSYEKFPAWSPDGKYISYLSDKNGSYQLVLANQATKAA 392

Query: 382 -QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS-- 438
            +   L        P WSP  + L ++     D    L+ ID+N R   L+     +   
Sbjct: 393 PEYISLGSTPFYFQPVWSPDSKKLFYA-----DAHLNLFYIDINARKPVLVKADTESPNP 447

Query: 439 -------DPQWVG 444
                  +P W  
Sbjct: 448 GRTYNPFNPSWSP 460



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 67/183 (36%), Gaps = 13/183 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  +  + ++  + R ++ S       P +SP+ + ++Y +  +     V          
Sbjct: 334 RGEIFSVPKEKGDARNISNSPGSYEKFPAWSPDGKYISYLSDKNGSYQLVLANQATKAAP 393

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTL----- 301
                        P +S + K+   +   D  ++++ +D+ +     +   T +      
Sbjct: 394 EYISLGSTPFYFQPVWSPDSKKLFYA---DAHLNLFYIDINARKPVLVKADTESPNPGRT 450

Query: 302 FINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +   + S+SPDS  I + +    G    ++   +     +I+ D  +    P +S  G  
Sbjct: 451 YNPFNPSWSPDSKWISYVATLPSGVNAAFLYNLDSQTHTQIT-DGMSDVNAPTFSRDGKY 509

Query: 361 IAF 363
           + F
Sbjct: 510 LFF 512



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 78/228 (34%), Gaps = 28/228 (12%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           VS   ++ +    + +  RDG+N R LT     +   P FSP+  ++A+    D +   +
Sbjct: 40  VSAQNLTFVYGGDIWIAGRDGSNPRRLTV-NPAVEQNPIFSPDGTQIAFTGNYDGNT-DI 97

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA----MDIYSVDLQSNATE 295
           Y++      +PKRI    S  +   +     +   +  +D        ++ + L   A E
Sbjct: 98  YVIPV-SGGSPKRITYHPSADVLRGW-IGNDQLYFTSVRDYNFALSPRMHRIKLDGTAEE 155

Query: 296 RLTNTLFINISASYSPDSSQIVFE-----SDR----------EGKEQLYVMQSNGSDQKR 340
            L        S   S D     +      S+R           G  Q+++  +   + + 
Sbjct: 156 ALPMPEAAQGSP--SADGRYWAYIKNGDPSERANVAFKRYRGGGMPQIWIFDTQTKNIE- 212

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           I     ++   P W   G+ I F         I   +    +   L  
Sbjct: 213 IIPGPGSNNVKPQWL--GNTIYFLSDRDLTMNIYGYEVGSKKTTQLTS 258



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A+     P R    F P +SP+ + ++Y       +   +L +       + I +  S +
Sbjct: 440 ADTESPNPGRTYNPFNPSWSPDSKWISYVATLPSGVNAAFLYNLDSQTHTQ-ITDGMSDV 498

Query: 261 LAPRFSSNGKRALISVQKD 279
            AP FS +GK        D
Sbjct: 499 NAPTFSRDGKYLFFLASTD 517


>gi|330996281|ref|ZP_08320166.1| peptidase, S9A/B/C family, catalytic domain protein [Paraprevotella
           xylaniphila YIT 11841]
 gi|329573473|gb|EGG55080.1| peptidase, S9A/B/C family, catalytic domain protein [Paraprevotella
           xylaniphila YIT 11841]
          Length = 734

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 84/268 (31%), Gaps = 59/268 (22%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------IY 285
           +D  I+    +    DR           I     S + ++ + +V             +Y
Sbjct: 23  NDGQIIGKNQITLTGDRLTPEALWAMGRIGTFAVSPDAQKIVYTVSYYSVQQNKSHTVLY 82

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            +D        LT T       +++PD  +I F S + G  Q++ M  +G+ ++++S   
Sbjct: 83  LMDADGTNPTLLTTTADNESEPAFTPDGQKITFLSSKSGSSQIWEMALDGTSRRQVSFCH 142

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEK---------------------------------FA 372
           +       +SP G  +                                            
Sbjct: 143 K-DVEGYKFSPDGKKVIIVHSVDTYTSIEKKYDDLPQASGMVITDLNYKHWDRYVTTIPH 201

Query: 373 IGVMK-KDG--SQERLLVEDSNLQAPT----------WSPSGRSLIFS-RKKDGD----- 413
           I V   +DG       L+   + + P           WSP  R ++++ RKK G      
Sbjct: 202 IFVADVRDGRAGDGIDLLNGESFECPMLPFGGSEQFNWSPDSRHIVYTCRKKTGRDYAIS 261

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQ 441
           T S +Y  D        +  PA   +P+
Sbjct: 262 TDSDIYRYDTATGQTENLCKPADYKEPE 289



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 105/309 (33%), Gaps = 62/309 (20%)

Query: 174 NSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
             +I++     SV        L +MD DG N   LT + D    EP F+P+ QK+ + + 
Sbjct: 60  AQKIVYTVSYYSVQQNKSHTVLYLMDADGTNPTLLTTTADN-ESEPAFTPDGQKITFLSS 118

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS----V 287
                 +++ M      + +++      +   +FS +GK+ +I    D    I      +
Sbjct: 119 KSGSS-QIWEMALD-GTSRRQVSFCHKDVEGYKFSPDGKKVIIVHSVDTYTSIEKKYDDL 176

Query: 288 DLQSNATERLT--NTLFINISASYSPDSSQIVFESD-REGK--EQLYVMQSNGSDQKRIS 342
              S     +T  N    +   +  P     +F +D R+G+  + + ++     +   + 
Sbjct: 177 PQASGMV--ITDLNYKHWDRYVTTIPH----IFVADVRDGRAGDGIDLLNGESFECPMLP 230

Query: 343 QDKEASYFDPVWSPQGDLIAFT--KFSGEKF------AIGVMKKDGSQERLLVEDSNLQA 394
                 +    WSP    I +T  K +G  +       I        Q   L + ++ + 
Sbjct: 231 FGGSEQFN---WSPDSRHIVYTCRKKTGRDYAISTDSDIYRYDTATGQTENLCKPADYKE 287

Query: 395 ----------------------------PTWSPSGRSLIFSRKKDGDTGS---KLYSIDL 423
                                       P +SP G+ + +         S   +L  +DL
Sbjct: 288 PEIDPSRSMEHQAINHLGRDCNVGYDTNPAYSPDGKYVAWLSMARNGYESDRTRLCVLDL 347

Query: 424 NGRNETLIN 432
               +T + 
Sbjct: 348 KTGAKTYVT 356



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 85/293 (29%), Gaps = 84/293 (28%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV-------AYATYDDE--- 234
            S    + +  M  DG + R ++     +    +FSP+ +KV        Y + + +   
Sbjct: 117 SSKSGSSQIWEMALDGTSRRQVSFCHKDVEGY-KFSPDGKKVIIVHSVDTYTSIEKKYDD 175

Query: 235 ----------------------DILRVYLMDTRIDRAPKRIGNFRSMIL-AP-------- 263
                                  I  +++ D R  RA   I          P        
Sbjct: 176 LPQASGMVITDLNYKHWDRYVTTIPHIFVADVRDGRAGDGIDLLNGESFECPMLPFGGSE 235

Query: 264 --RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERL---------------- 297
              +S + +  + + +K            DIY  D  +  TE L                
Sbjct: 236 QFNWSPDSRHIVYTCRKKTGRDYAISTDSDIYRYDTATGQTENLCKPADYKEPEIDPSRS 295

Query: 298 -----TNTLF------INISASYSPDSSQIVFESD-REG----KEQLYVMQSNGSDQKRI 341
                 N L        + + +YSPD   + + S  R G    + +L V+      +  +
Sbjct: 296 MEHQAINHLGRDCNVGYDTNPAYSPDGKYVAWLSMARNGYESDRTRLCVLDLKTGAKTYV 355

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           ++  ++      W+       FT     +  +      G    L   D +  A
Sbjct: 356 TEAFQSGVDGFCWAADSRSFYFTGVWQARSMVHSTNLKGEVRPLTTGDFDYGA 408


>gi|156050805|ref|XP_001591364.1| hypothetical protein SS1G_07990 [Sclerotinia sclerotiorum 1980]
 gi|154692390|gb|EDN92128.1| hypothetical protein SS1G_07990 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 592

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 92/291 (31%), Gaps = 37/291 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K          RLWD    + +   +            H  S  ++       G     
Sbjct: 80  TKVASGSHDNTIRLWDAVTGESLQTLE-----------GH--SGSVWSVAFSPDG----- 121

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                  V SG   N++ + D                ++   FSP+  KVA  +YD    
Sbjct: 122 -----TKVASGSHDNTIRLWDAVTGESLQTLEGHSNSVWSVAFSPDGTKVASGSYDK--- 173

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L D     + + +      + +  FS +G +   S   D+ + ++   +   + + 
Sbjct: 174 -TIRLWDAMTGESLQTLEGHSGSVWSVAFSPDGTKVA-SGSYDKTIRLWDA-VTGESLQT 230

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L +      S ++SPD +++   S       + +  +   +  +  +          +SP
Sbjct: 231 LEDHSSWVNSVAFSPDGTKVASGSH---DNTIRLWDAMTGESLQTLEGHSDWVNSVAFSP 287

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
            G  +A   +      I +      +    +E  +    +  +SP G  + 
Sbjct: 288 DGTKVASGSYDDT---IRLWDAMTGESLQTLEGHSDWVWSVAFSPDGTKVA 335



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 106/310 (34%), Gaps = 33/310 (10%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGK----------KFFSSPASWRKIAHTISDDIYQSI 166
            K          RLWD    + +              F          +H  +  ++ ++
Sbjct: 206 TKVASGSYDKTIRLWDAVTGESLQTLEDHSSWVNSVAFSPDGTKVASGSHDNTIRLWDAM 265

Query: 167 TGEK-------GDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           TGE         D+ + + F  +   V SG   +++ + D                ++  
Sbjct: 266 TGESLQTLEGHSDWVNSVAFSPDGTKVASGSYDDTIRLWDAMTGESLQTLEGHSDWVWSV 325

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  KVA  +YD      + L D     + + + +    + +  FS +G +   S  
Sbjct: 326 AFSPDGTKVASGSYDK----TIRLWDAMTGESLQTLEDHSDSVTSVAFSPDGTKVA-SGS 380

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D+ + ++   +   + + L        S ++SPD +++   S     + + +  +   +
Sbjct: 381 QDKTIRLWDA-MTGESLQTLEGHSGSVWSVAFSPDGTKVASGSH---DKTIRLWDAMTGE 436

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAP 395
             +  +    S     +SP G  +A          I +      +    +E    ++ + 
Sbjct: 437 SLQTLEGHSNSVLSVAFSPDGTKVASGSHDKT---IRLWDAMTGESLQTLEGHLGSVTSV 493

Query: 396 TWSPSGRSLI 405
            +SP G  + 
Sbjct: 494 AFSPDGTKVA 503



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 83/231 (35%), Gaps = 14/231 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V SG   N++ + D                ++   FSP+  KVA  ++D+     + L 
Sbjct: 81  KVASGSHDNTIRLWDAVTGESLQTLEGHSGSVWSVAFSPDGTKVASGSHDN----TIRLW 136

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D     + + +    + + +  FS +G +   S   D+ + ++   +   + + L     
Sbjct: 137 DAVTGESLQTLEGHSNSVWSVAFSPDGTKVA-SGSYDKTIRLWDA-MTGESLQTLEGHSG 194

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++SPD +++   S     + + +  +   +  +  +D  +      +SP G  +A
Sbjct: 195 SVWSVAFSPDGTKVASGSY---DKTIRLWDAVTGESLQTLEDHSSWVNSVAFSPDGTKVA 251

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKD 411
                     I +      +    +E  +    +  +SP G  +      D
Sbjct: 252 SGSHDNT---IRLWDAMTGESLQTLEGHSDWVNSVAFSPDGTKVASGSYDD 299



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 74/203 (36%), Gaps = 14/203 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    FSP+  KVA  ++D+     + L D     + + +      + +  
Sbjct: 61  QTLEGHSSWVNSVAFSPDGTKVASGSHDN----TIRLWDAVTGESLQTLEGHSGSVWSVA 116

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G +   S   D  + ++   +   + + L        S ++SPD +++   S    
Sbjct: 117 FSPDGTKVA-SGSHDNTIRLWDA-VTGESLQTLEGHSNSVWSVAFSPDGTKVASGSY--- 171

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +  +   +  +  +    S +   +SP G  +A   +      I +      +  
Sbjct: 172 DKTIRLWDAMTGESLQTLEGHSGSVWSVAFSPDGTKVASGSYDKT---IRLWDAVTGESL 228

Query: 385 LLVED--SNLQAPTWSPSGRSLI 405
             +ED  S + +  +SP G  + 
Sbjct: 229 QTLEDHSSWVNSVAFSPDGTKVA 251



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 91/274 (33%), Gaps = 37/274 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K          RLWD    + +   +            H  SD ++       G     
Sbjct: 290 TKVASGSYDDTIRLWDAMTGESLQTLE-----------GH--SDWVWSVAFSPDG----- 331

Query: 177 ILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                  V SG    ++ + D   G +++ L    D +     FSP+  KVA  + D   
Sbjct: 332 -----TKVASGSYDKTIRLWDAMTGESLQTLEDHSDSVTSV-AFSPDGTKVASGSQDK-- 383

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              + L D     + + +      + +  FS +G +   S   D+ + ++   +   + +
Sbjct: 384 --TIRLWDAMTGESLQTLEGHSGSVWSVAFSPDGTKVA-SGSHDKTIRLWDA-MTGESLQ 439

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L       +S ++SPD +++   S     + + +  +   +  +  +    S     +S
Sbjct: 440 TLEGHSNSVLSVAFSPDGTKVASGSH---DKTIRLWDAMTGESLQTLEGHLGSVTSVAFS 496

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           P G  +A   +      I +      +    +E 
Sbjct: 497 PDGTKVASGSYDNT---IRLWDAMTGESLQTLEG 527



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 83/231 (35%), Gaps = 17/231 (7%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           F+P    +   +  Y    I ++    +    A + +    S + +  FS +G +   S 
Sbjct: 27  FAPENSIIRKTFQEYIPSWIYKISRTRSNWSAALQTLEGHSSWVNSVAFSPDGTKVA-SG 85

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  + ++   +   + + L        S ++SPD +++   S       + +  +   
Sbjct: 86  SHDNTIRLWDA-VTGESLQTLEGHSGSVWSVAFSPDGTKVASGSH---DNTIRLWDAVTG 141

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
           +  +  +    S +   +SP G  +A   +      I +      +    +E    ++ +
Sbjct: 142 ESLQTLEGHSNSVWSVAFSPDGTKVASGSYDKT---IRLWDAMTGESLQTLEGHSGSVWS 198

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
             +SP G  +        D   +L+   + G + +TL +  ++ +   +  
Sbjct: 199 VAFSPDGTKVASGSY---DKTIRLWDA-VTGESLQTLEDHSSWVNSVAFSP 245



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 70/224 (31%), Gaps = 30/224 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQI------------------IGKKFFSSPASWRKIAHTI 158
            K          RLWD    + +                    K    S     ++   +
Sbjct: 332 TKVASGSYDKTIRLWDAMTGESLQTLEDHSDSVTSVAFSPDGTKVASGSQDKTIRLWDAM 391

Query: 159 SDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           + +  Q++ G  G   S       + V SG    ++ + D                +   
Sbjct: 392 TGESLQTLEGHSGSVWSVAFSPDGTKVASGSHDKTIRLWDAMTGESLQTLEGHSNSVLSV 451

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  KVA  ++D      + L D     + + +      + +  FS +G +   S  
Sbjct: 452 AFSPDGTKVASGSHDK----TIRLWDAMTGESLQTLEGHLGSVTSVAFSPDGTKVA-SGS 506

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            D  + ++   +   + + L     +  S+++     +  F S+
Sbjct: 507 YDNTIRLWDA-MTGESLQTLEGHSSLQASSAF-----ERYFISN 544


>gi|291337042|gb|ADD96563.1| hypothetical protein [uncultured organism MedDCM-OCT-S11-C346]
          Length = 116

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 2/103 (1%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P +S + Q + + +Y  E+   +Y +  +  R    + + R +      S +GK+  +
Sbjct: 1   MLPAWSRDGQSLLFTSYLRENP-DLYRLHLKT-RKLDWLSHKRGLNTGAAVSPDGKKIAL 58

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           ++  D   +IY +D       RLT++   +IS ++SPD  +I 
Sbjct: 59  TLSIDGNTEIYLMDPDGKNLTRLTDSWGQDISPTWSPDGKRIA 101



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 1/105 (0%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +S +G+  L +    E  D+Y + L++   + L++   +N  A+ SPD  +I      
Sbjct: 3   PAWSRDGQSLLFTSYLRENPDLYRLHLKTRKLDWLSHKRGLNTGAAVSPDGKKIALTLSI 62

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +G  ++Y+M  +G +  R++ D       P WSP G  IA +  +
Sbjct: 63  DGNTEIYLMDPDGKNLTRLT-DSWGQDISPTWSPDGKRIALSAHA 106



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 37/104 (35%), Gaps = 2/104 (1%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++S D   ++F S       LY +         +S  K         SP G  IA T  
Sbjct: 3   PAWSRDGQSLLFTSYLRENPDLYRLHLKTRKLDWLSH-KRGLNTGAAVSPDGKKIALTLS 61

Query: 367 SGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRK 409
                 I +M  DG     L +      +PTWSP G+ +  S  
Sbjct: 62  IDGNTEIYLMDPDGKNLTRLTDSWGQDISPTWSPDGKRIALSAH 105



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 4/95 (4%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKK 410
           P WS  G  + FT +  E   +  +     +   L            SP G+ +  +   
Sbjct: 3   PAWSRDGQSLLFTSYLRENPDLYRLHLKTRKLDWLSHKRGLNTGAAVSPDGKKIALTLSI 62

Query: 411 DGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVG 444
           DG+T  ++Y +D +G+N T +         P W  
Sbjct: 63  DGNT--EIYLMDPDGKNLTRLTDSWGQDISPTWSP 95



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
               +  +      SP+ +K+A     D +   +YLMD    +   R+ +     ++P +
Sbjct: 36  WLSHKRGLNTGAAVSPDGKKIALTLSIDGNT-EIYLMDPD-GKNLTRLTDSWGQDISPTW 93

Query: 266 SSNGKRALISV 276
           S +GKR  +S 
Sbjct: 94  SPDGKRIALSA 104



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             + +MD DG N+  LT S       P +SP+ +++A + +  E     Y
Sbjct: 66  TEIYLMDPDGKNLTRLTDS-WGQDISPTWSPDGKRIALSAHALEPTYLRY 114


>gi|322368437|ref|ZP_08043006.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
 gi|320552453|gb|EFW94098.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
          Length = 652

 Score = 98.6 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 84/242 (34%), Gaps = 21/242 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S +  + A+       +        R    PKR G F        +S +         
Sbjct: 95  TWSNDGTRFAFYRDGRPTVRDAETGTERGFDGPKR-GPFLGESRMFAWSDDDTYLAYRFV 153

Query: 278 KDEAMDIYSVDLQS--NATERL---TNTLFINISASYSPDSSQIVFESDREGK--EQLYV 330
           +DE   +  +D++S    T+ L   T+    N   ++  D  +++F+   EG    ++  
Sbjct: 154 EDETTHVGVIDVESASGQTDELVWRTHGEMANSCPAWLADG-RVIFDRRGEGGTMRRIVA 212

Query: 331 MQSNGSDQKRISQD-----KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                 ++  + ++        S   P  SP G  IA +        + V+     +   
Sbjct: 213 ADPETGEETVLVEEIDRERGIVSSGAPAVSPDGTKIALSLPLDGWDHVHVVDVTSGERTQ 272

Query: 386 LVEDSNLQ------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           L   +          P W     +L+F+  ++      L+++ L+G    L+ TP     
Sbjct: 273 LTRGAFEDKGVADATPRWL-DDETLVFASNRNDSGQRHLFAVTLDGDTTPLVETPGTNVH 331

Query: 440 PQ 441
           P+
Sbjct: 332 PR 333



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 73/204 (35%), Gaps = 16/204 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP---KRIGNFRSMIL- 261
                +     P +  + + +     +   + R+   D          + I   R ++  
Sbjct: 177 WRTHGEMANSCPAWLADGRVIFDRRGEGGTMRRIVAADPETGEETVLVEEIDRERGIVSS 236

Query: 262 -APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-----INISASYSPDSSQ 315
            AP  S +G +  +S+  D    ++ VD+ S    +LT   F      + +  +  D   
Sbjct: 237 GAPAVSPDGTKIALSLPLDGWDHVHVVDVTSGERTQLTRGAFEDKGVADATPRWL-DDET 295

Query: 316 IVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFA 372
           +VF S+R   G+  L+ +  +G     +  +   +   P  +P G+ +A+          
Sbjct: 296 LVFASNRNDSGQRHLFAVTLDGDTTPLV--ETPGTNVHPRPAPDGETLAYVHADRARSPE 353

Query: 373 IGVMKKDGSQERLLVEDSNLQAPT 396
           + V      + R L   S  + PT
Sbjct: 354 LRVSSVVDGEPRRLTRSSVEEWPT 377



 Score = 80.8 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 93/280 (33%), Gaps = 25/280 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +R  F  +   +     +      DG     +L  SR        +S +   +AY   +D
Sbjct: 101 TRFAFYRDGRPTVRDAETGTERGFDGPKRGPFLGESRMF-----AWSDDDTYLAYRFVED 155

Query: 234 EDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--D 288
           E      +           +    +       P + ++G R +   + +       V  D
Sbjct: 156 ETTHVGVIDVESASGQTDELVWRTHGEMANSCPAWLADG-RVIFDRRGEGGTMRRIVAAD 214

Query: 289 LQSNATERLT----NTLFINIS--ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++     L         I  S   + SPD ++I      +G + ++V+     ++ +++
Sbjct: 215 PETGEETVLVEEIDRERGIVSSGAPAVSPDGTKIALSLPLDGWDHVHVVDVTSGERTQLT 274

Query: 343 Q----DKEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +    DK  +   P W     L+ A  +    +  +  +  DG    L+        P  
Sbjct: 275 RGAFEDKGVADATPRWLDDETLVFASNRNDSGQRHLFAVTLDGDTTPLVETPGTNVHPRP 334

Query: 398 SPSGRSLIFS-RKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           +P G +L +    +      ++ S+ ++G    L  +   
Sbjct: 335 APDGETLAYVHADRARSPELRVSSV-VDGEPRRLTRSSVE 373



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 70/220 (31%), Gaps = 56/220 (25%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQS------------------------------- 291
           P +S++G     +  +D+   ++  D                                  
Sbjct: 9   PAWSADGDFLAATAYEDDGNALFVTDPDGNRSWRFSPEECYVSDFEWSSTNSELLVATDA 68

Query: 292 ----------NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
                       TERL +      S ++S D ++  F   R+G+    V  +    ++  
Sbjct: 69  GELLLADPERRTTERLLSGPEPTESYTWSNDGTRFAF--YRDGRPT--VRDAETGTERGF 124

Query: 342 SQDKEASYFDP----VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER------LLVEDSN 391
              K   +        WS     +A+     E   +GV+  + +  +          +  
Sbjct: 125 DGPKRGPFLGESRMFAWSDDDTYLAYRFVEDETTHVGVIDVESASGQTDELVWRTHGEMA 184

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              P W   GR +IF R+ +G T  ++ + D     ET++
Sbjct: 185 NSCPAWLADGR-VIFDRRGEGGTMRRIVAADPETGEETVL 223


>gi|145499207|ref|XP_001435589.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402723|emb|CAK68192.1| unnamed protein product [Paramecium tetraurelia]
          Length = 806

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 63/386 (16%), Positives = 128/386 (33%), Gaps = 58/386 (15%)

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVT-----GRV---- 116
           + +V  +L  S +F+ +          N  S+   + W ++    L       G V    
Sbjct: 348 ANMVRCNLNGS-IFDNVDISGMS---LNGASLFNCK-WKNIQIHDLNKFDAHNGSVYTIC 402

Query: 117 -IKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
               G            RLWDVK  +Q                 HT    IY       G
Sbjct: 403 FSPNGATFASGSGDNSIRLWDVKTGQQKAKLD-----------GHTH--YIYSIFFSPDG 449

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
                      ++VSG    S+ + D                ++   FSP+   +A    
Sbjct: 450 ----------STIVSGSEDKSIRLWDVQTGQQIRKLDGHTSAVYSVSFSPDGATLA---- 495

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                  + L D +  +   ++    S + +  FS +G     S   D+++ ++  ++++
Sbjct: 496 SGGGDSSIRLWDAKTGQLKAKLDGHTSTVYSVCFSPDGTSLA-SSSYDKSIRLW--NIKT 552

Query: 292 NATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              + + +     +    + PD + +   S     + + +       QK           
Sbjct: 553 GQQKAILDGHKDYVKTVCFHPDGTILASGSH---DKSIRLWDVKTGQQKAKLDGHSQLVI 609

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              +SP G  +A   +      +  +K    Q +L    S +Q+ ++SP G +L      
Sbjct: 610 SVCFSPDGTTLASGSYD-RSIRLWDIKTGQQQAKLDGHTSYVQSVSFSPDGTTLASGSH- 667

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAY 436
             D   +L+ I + G+ +T +++   
Sbjct: 668 --DNSIRLWEIKI-GQQQTKLDSNTN 690



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 86/260 (33%), Gaps = 15/260 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   NS+ + D      +         ++   FSP+   +   + D      + L D +
Sbjct: 412 SGSGDNSIRLWDVKTGQQKAKLDGHTHYIYSIFFSPDGSTIVSGSEDK----SIRLWDVQ 467

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
             +  +++    S + +  FS +G              I   D ++   + +L       
Sbjct: 468 TGQQIRKLDGHTSAVYSVSFSPDGATLA---SGGGDSSIRLWDAKTGQLKAKLDGHTSTV 524

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  +SPD + +   S     + + +       QK I    +       + P G ++A +
Sbjct: 525 YSVCFSPDGTSLASSSY---DKSIRLWNIKTGQQKAILDGHKDYVKTVCFHPDGTILA-S 580

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               +   +  +K    + +L      + +  +SP G +L        D   +L+ I   
Sbjct: 581 GSHDKSIRLWDVKTGQQKAKLDGHSQLVISVCFSPDGTTLASGSY---DRSIRLWDIKTG 637

Query: 425 GRNETLINTPAYASDPQWVG 444
            +   L    +Y     +  
Sbjct: 638 QQQAKLDGHTSYVQSVSFSP 657



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 104/282 (36%), Gaps = 39/282 (13%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKI-AHTISDDIYQSITGEKGDFNSRILFVSESVV 185
             RLWDV+  +QI            RK+  HT +  +Y       G           ++ 
Sbjct: 460 SIRLWDVQTGQQI------------RKLDGHTSA--VYSVSFSPDGA----------TLA 495

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   +S+ + D     ++         ++   FSP+   +A ++YD      + L + +
Sbjct: 496 SGGGDSSIRLWDAKTGQLKAKLDGHTSTVYSVCFSPDGTSLASSSYDK----SIRLWNIK 551

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
             +    +   +  +    F  +G   L S   D+++ ++  D+++   + +L     + 
Sbjct: 552 TGQQKAILDGHKDYVKTVCFHPDGT-ILASGSHDKSIRLW--DVKTGQQKAKLDGHSQLV 608

Query: 305 ISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           IS  +SPD + +   S DR     + +       Q+       +      +SP G  +A 
Sbjct: 609 ISVCFSPDGTTLASGSYDRS----IRLWDIKTGQQQAKLDGHTSYVQSVSFSPDGTTLAS 664

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                    +  +K    Q +L    + +Q+  +SP    L 
Sbjct: 665 GSHDNS-IRLWEIKIGQQQTKLDSNTNYVQSVCFSPDSTILA 705


>gi|255557544|ref|XP_002519802.1| conserved hypothetical protein [Ricinus communis]
 gi|223541041|gb|EEF42598.1| conserved hypothetical protein [Ricinus communis]
          Length = 724

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 68/376 (18%), Positives = 124/376 (32%), Gaps = 83/376 (22%)

Query: 147 SPASWRKI------AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
             A +R I      A   S  I Q    +   FN  ++   + +     K+ L     D 
Sbjct: 310 VEAQYRHIEIFDSTAPQQSIQITQKTRPKADHFNPFVIDGGKRIGYHRCKSELLKSGDDI 369

Query: 201 ANIRYLTPSRDQIL-------FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
               +   S    +         P FS +  K+A+   + + +        RI    K  
Sbjct: 370 QRHFHKLKSPYPDVGLFRVSGVFPTFSKDGSKLAFVDNEFKAVWVADSDGMRIVFETK-- 427

Query: 254 GNFRSMILAPRFS--SNGKRALI----SVQKDEAMDIYSV-DLQSNATER--LTNTLFIN 304
                 I +P +S         +    S    + + I ++ ++ S A  R  LT   F N
Sbjct: 428 --GPDNIFSPVWSQNPQDDTLYVCMGPSFNAGQTLQICAIPNVASGARRRRQLTRG-FNN 484

Query: 305 ISASYSPDSSQIVFESDREGKE----QLYVMQ------SNGSDQKRISQDKEASYFDPVW 354
              S SPD +++VF S R+G +     LY+M+             R++ +   +     W
Sbjct: 485 AFPSTSPDGTKLVFRSTRDGGDKQYKNLYIMEDAKVGEFGDGKITRLT-NGPWTDTHCQW 543

Query: 355 SPQGDLIAFTKFSG--------------EKFAIGVMKKD--GSQERLLVED----SNLQA 394
           SP+GD I F+                    FA+ ++K +      R++        ++  
Sbjct: 544 SPRGDWIVFSSTRDKPKDAPDSDNGLDPGYFAVFLVKVNDPSVVIRVIKSGDDLAGHVNH 603

Query: 395 PTWSPSGRSLIFSRK---------------KDGDTGSKLYSIDLN----------GRNET 429
           P +SP G S+  +                         L+ +D++           +   
Sbjct: 604 PFFSPDGMSIAVTSDLAAVSVDPISLPLFLHSVRPYGDLFVVDIDPSDINKNKDVKKFNR 663

Query: 430 LINTPAYASDPQWVGF 445
           + ++    S P W  F
Sbjct: 664 ITHSRYENSTPTWTMF 679



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 56/155 (36%), Gaps = 17/155 (10%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--------- 327
           ++     +Y  +L++  TERLT     ++S S SP   ++   S +              
Sbjct: 158 RRQPWTVVYKTNLRTGRTERLTPPGVNDLSPSVSPSGRKVAVASFQGKGWNGEIEDLQTD 217

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ----E 383
           +YVM        R+   K   +  P W    ++I F +  GE +++        +     
Sbjct: 218 IYVMNVEKPPLGRMRVIKNGGW--PTWGSD-NIIFFHRKVGEFWSVFRADISNGETSETL 274

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           R+  +  +   P  + +   +  +  +     + +
Sbjct: 275 RVTPDGIDAITPA-AINATKVAVATIRQKPKFNDI 308



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 51/169 (30%), Gaps = 34/169 (20%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---------D 279
            + D      V           +R+       L+P  S +G++  ++  +         D
Sbjct: 154 PSKDRRQPWTVVYKTNLRTGRTERLTPPGVNDLSPSVSPSGRKVAVASFQGKGWNGEIED 213

Query: 280 EAMDIYSVDLQS---NATERLTNTLFINISASYSPDS----------SQIVFESDREGKE 326
              DIY ++++         + N  +     ++  D+             VF +D     
Sbjct: 214 LQTDIYVMNVEKPPLGRMRVIKNGGW----PTWGSDNIIFFHRKVGEFWSVFRAD----- 264

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              +     S+  R++ D   +      +     +A  +   +   I V
Sbjct: 265 ---ISNGETSETLRVTPDGIDAITPAAINATKVAVATIRQKPKFNDIRV 310



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 86/263 (32%), Gaps = 42/263 (15%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDI--------LRVYLMDTRIDRAPK-RIGNFRSMILAPR 264
              P  SP+ +KVA A++  +            +Y+M+       + R+         P 
Sbjct: 185 DLSPSVSPSGRKVAVASFQGKGWNGEIEDLQTDIYVMNVEKPPLGRMRVIKNGGW---PT 241

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFIN--ISASYSPDSSQIV-- 317
           + S+        +  E   ++  D+ +  T    R+T    I+    A+ +     +   
Sbjct: 242 WGSD-NIIFFHRKVGEFWSVFRADISNGETSETLRVTPD-GIDAITPAAINATKVAVATI 299

Query: 318 -----FESDREGKEQLYVMQSNGSDQK---RISQDKE--ASYFDPVWSPQGDLIAFTK-- 365
                F   R   +  ++   + +  +   +I+Q     A +F+P     G  I + +  
Sbjct: 300 RQKPKFNDIRVEAQYRHIEIFDSTAPQQSIQITQKTRPKADHFNPFVIDGGKRIGYHRCK 359

Query: 366 ----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                SG+       K       + +   +   PT+S  G  L F   +       ++  
Sbjct: 360 SELLKSGDDIQRHFHKLKSPYPDVGLFRVSGVFPTFSKDGSKLAFVDNE----FKAVWVA 415

Query: 422 DLNG-RNETLINTPAYASDPQWV 443
           D +G R       P     P W 
Sbjct: 416 DSDGMRIVFETKGPDNIFSPVWS 438


>gi|255558604|ref|XP_002520327.1| conserved hypothetical protein [Ricinus communis]
 gi|223540546|gb|EEF42113.1| conserved hypothetical protein [Ricinus communis]
          Length = 540

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 65/391 (16%), Positives = 120/391 (30%), Gaps = 67/391 (17%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
             S DS       P  I  F   +S G    +     +   D   VE  L+D+       
Sbjct: 139 PTSIDSVIVDRVTPPGIHAFTPASSPGNNKFIAVATRRPYSDYRHVE--LFDLVKNG-FT 195

Query: 141 GKKFFSSPASWRKIAHTISDDI---YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
                 +P +         D     Y   +G      S   F+ E++ S +   SL  + 
Sbjct: 196 EFTRLIAPNTNHFNPFISPDSARVGYHRCSGSSNGKRSSSRFMLENLKSPVPGISLFRI- 254

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG                P +S     +A   +       +Y+++            + 
Sbjct: 255 -DG--------------RFPSWSRGGDSIALTKFSG-----IYVVNPDGLHRRMV---YP 291

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS--Q 315
            +     +  +    + S               ++AT +LT     N       D     
Sbjct: 292 GLAFPTIWDPDRPGVVYSSTG---------PAFASATTQLTTNGDNNAFPDRMGDGLCLG 342

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS----GE 369
            VF   R     LY+M +   ++  + +  E  + D    WSP G+ I F          
Sbjct: 343 RVFRVVRT----LYIMDAVEGEKGGLYRVIEGLWDDTMCDWSPDGEWIVFCSDREEPGTG 398

Query: 370 KFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDG------------DT 414
            F +  +  +G+  R L++      +     SP+G+S++F+                   
Sbjct: 399 SFDLYFIHPNGTGLRKLLQSGSGGRVNHLYISPNGKSIVFTTDYTAISAEPISNQQMFQP 458

Query: 415 GSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
             ++Y I+L+G     +   ++    P W  
Sbjct: 459 YGEIYIINLDGSGLKRLTHNSFEDGTPAWGP 489



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 43/117 (36%), Gaps = 18/117 (15%)

Query: 219 FSPNQQKVAYATYDDEDI---LRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGKRALI 274
           +SP+ + + + +  +E       +Y +        K + +     +   + S NGK  + 
Sbjct: 379 WSPDGEWIVFCSDREEPGTGSFDLYFIHPNGTGLRKLLQSGSGGRVNHLYISPNGKSIVF 438

Query: 275 SVQKD--------------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +                     +IY ++L  +  +RLT+  F + + ++ P   +  
Sbjct: 439 TTDYTAISAEPISNQQMFQPYGEIYIINLDGSGLKRLTHNSFEDGTPAWGPRYMKPA 495



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 66/235 (28%), Gaps = 37/235 (15%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              ++  PR +P++                           +R+  +     +P  S +G
Sbjct: 8   STNLIMMPREAPDRD-----PQKPRASWAAVYSTGLKSGFTRRLTPYGVADFSPAVSPSG 62

Query: 270 KRALISVQK----DEAMDIYSVD------LQSNATERLTNTLFINISASYSPDSSQIVF- 318
               ++       +  +++ S D      L      ++          ++  D S + F 
Sbjct: 63  VYTAVASYGARGWNGEVEVLSTDIYAFLTLDGTQRVKVVENGGW---PTWVND-STLYFH 118

Query: 319 -ESDREGKEQLYVMQSNGSDQK--------RISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
             S+ +G   +Y                  R++     + F P  SP     IA      
Sbjct: 119 RRSEEDGWISVYRAILPSRGPTSIDSVIVDRVTPPGIHA-FTPASSPGNNKFIAVATRRP 177

Query: 369 EKFAIGVMKKD------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                 V   D          RL+  ++N   P  SP    + + R      G +
Sbjct: 178 YSDYRHVELFDLVKNGFTEFTRLIAPNTNHFNPFISPDSARVGYHRCSGSSNGKR 232


>gi|145493133|ref|XP_001432563.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124399675|emb|CAK65166.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1111

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 52/288 (18%), Positives = 101/288 (35%), Gaps = 40/288 (13%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                +  RLWD+  ++                         Y  +    G ++      
Sbjct: 713 SGSKDMSMRLWDITGQQP------------------------YNLVGHASGVYSVCFSPD 748

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
              + SG   NS+C+ D     +        + + +  FSP+   +A ++ D      V 
Sbjct: 749 CAQIASGSGDNSICLWDVKTGKLNVKLNGHSKYVSQVCFSPDGSSLASSSGDM----SVR 804

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTN 299
           L + +  +   ++      + +  FS +G   L S   DE++ ++ V+  +   + R+TN
Sbjct: 805 LWNVKQGKLTYKLDGHFEGVYSVCFSPDGT-ILASGGGDESIRLWEVN--TGQLKSRITN 861

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S  +SP+ S +V  S     E + +      +QK          F   +SP G 
Sbjct: 862 HDGGVFSICFSPNGSTLVSCS---ADESIRLWNVKTGEQKSKLSGNSGWVFQVCFSPDGT 918

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
           LIA          I +   +  Q+   ++  +   Q+  +S  G  L 
Sbjct: 919 LIASGSRDKS---IHLWDSETGQQTYKLDSLDDAVQSVCFSSDGTILA 963



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 96/295 (32%), Gaps = 22/295 (7%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            ++ A  R+    ++  + QS+ G         +    +  S      L          +
Sbjct: 592 TATKADTRRAPVLLA--MLQSVVGINQFAYGMAILSMFTSCSEDKSIRLWDTIV--GQQK 647

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +   +    +F   FSP+   +A    D      + + D ++ +   ++   RS + +  
Sbjct: 648 FKFQNNGIGVFTICFSPDGTILASGNEDG----LICIWDVKLGQLKSKLKGHRSQVCSVN 703

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS++G   + S  KD +M ++  D+       L        S  +SPD +QI   S   G
Sbjct: 704 FSTDGATLV-SGSKDMSMRLW--DITGQQPYNLVGHASGVYSVCFSPDCAQIASGS---G 757

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +                       +SP G  +A +       ++ +      +  
Sbjct: 758 DNSICLWDVKTGKLNVKLNGHSKYVSQVCFSPDGSSLASSS---GDMSVRLWNVKQGKLT 814

Query: 385 LLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             ++       +  +SP G  L       GD   +L+ ++       + N     
Sbjct: 815 YKLDGHFEGVYSVCFSPDGTILA---SGGGDESIRLWEVNTGQLKSRITNHDGGV 866



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 6/125 (4%)

Query: 164 QSITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
             +    G  +S      S +VVSG  K S+ + D      ++        ++   FSP+
Sbjct: 400 HYLDSNSGAISSVCFSPDSATVVSGNDKGSISLWDFRTGQPKFKLIGHSSQVYSISFSPD 459

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              +A  + D+     + L D +  +   ++      +L   FS +G +   S   D  +
Sbjct: 460 GNTLASGSADN----SIRLWDIKTRKKKSKLIGHGGGVLCVCFSPDGSKIA-SSSDDWTI 514

Query: 283 DIYSV 287
            ++ +
Sbjct: 515 RLWDI 519



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 58/155 (37%), Gaps = 18/155 (11%)

Query: 268 NGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           NG + L    K+    +++ +D  S A            S  +SPDS+ +V  +D   K 
Sbjct: 382 NGTQLLYCKWKNIRIEELHYLDSNSGAIS----------SVCFSPDSATVVSGND---KG 428

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +        K       +  +   +SP G+ +A +  +     +  +K    + +L+
Sbjct: 429 SISLWDFRTGQPKFKLIGHSSQVYSISFSPDGNTLA-SGSADNSIRLWDIKTRKKKSKLI 487

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                +    +SP G  +  S     D   +L+ I
Sbjct: 488 GHGGGVLCVCFSPDGSKIASSSD---DWTIRLWDI 519



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 51/157 (32%), Gaps = 21/157 (13%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N  ++ Y  + +  I  ++ +D+               I +  FS +       V  ++ 
Sbjct: 382 NGTQLLYCKWKNIRIEELHYLDSNS-----------GAISSVCFSPDS---ATVVSGNDK 427

Query: 282 MDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             I   D ++   + +L        S S+SPD + +   S       + +       +K 
Sbjct: 428 GSISLWDFRTGQPKFKLIGHSSQVYSISFSPDGNTLASGS---ADNSIRLWDIKTRKKKS 484

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                        +SP G  IA +    + + I +  
Sbjct: 485 KLIGHGGGVLCVCFSPDGSKIASSS---DDWTIRLWD 518


>gi|255566348|ref|XP_002524160.1| conserved hypothetical protein [Ricinus communis]
 gi|223536578|gb|EEF38223.1| conserved hypothetical protein [Ricinus communis]
          Length = 724

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 68/375 (18%), Positives = 126/375 (33%), Gaps = 83/375 (22%)

Query: 148 PASWRKI------AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
            A +R I      A   S  I Q    +   FN  I+   + +     K+ L     D  
Sbjct: 311 EAQYRHIEIFDSTAPQQSIQITQKTRSKADHFNPFIIDGGKRIGYHRCKSDLVKNGDDIQ 370

Query: 202 NIRYLTPSRDQIL-------FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
              +   S    +         P FS +  K+A+   + + +        RI    K   
Sbjct: 371 RHFHKLNSPHPDVGLFRVSGVFPTFSVDGSKLAFVDNEFKAVWVADSNGLRIVYETK--- 427

Query: 255 NFRSMILAPRFS--SNGKRALI----SVQKDEAMDIYSV-DLQSNATER--LTNTLFINI 305
                I +P +S         +    S    +++ I ++ ++ S A  R  LT   F N 
Sbjct: 428 -GPDNIFSPVWSQNPQDDTLYVCMGPSFNAGQSLQICAIPNVASGARRRRQLTKG-FNNA 485

Query: 306 SASYSPDSSQIVFESDREGKE----QLYVMQ------SNGSDQKRISQDKEASYFDPVWS 355
             S SPD +++VF S R+G +     LY+M+             R++ +   +     WS
Sbjct: 486 FPSTSPDGTKLVFRSTRDGGDKKYKNLYIMEDAQVGEYGDGKITRLT-NGPWTDTHCQWS 544

Query: 356 PQGDLIAFTKFSG--------------EKFAIGVMKKD--GSQERLLVED----SNLQAP 395
           P+GD I F+                    FA+ ++K +      R++        ++  P
Sbjct: 545 PRGDWIVFSSTRDKPKDAPETDNGLDPGYFAVFLVKVNDPSVVIRVIKSGDDLAGHVNHP 604

Query: 396 TWSPSGRSLIFSRK---------------KDGDTGSKLYSIDLN----------GRNETL 430
            +SP G S+  +                         ++++D++           +   +
Sbjct: 605 FFSPDGMSIAVTSDLAAVSADPISLPLFLHSVRPYGDVFTVDIDPDDINKNKDVKKFNRI 664

Query: 431 INTPAYASDPQWVGF 445
            ++    S P W  F
Sbjct: 665 THSRYENSTPTWTMF 679



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 82/255 (32%), Gaps = 24/255 (9%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI-LFEPRFSPNQQKVAYA---TYDDE 234
           F    + +      +        +I+    +R +   F P      +++ Y    +   +
Sbjct: 305 FSDIRLEAQYRHIEIFDSTAPQQSIQITQKTRSKADHFNPFIIDGGKRIGYHRCKSDLVK 364

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +   +     +++     +G FR   + P FS +G +       +E   ++  D      
Sbjct: 365 NGDDIQRHFHKLNSPHPDVGLFRVSGVFPTFSVDGSKLAFV--DNEFKAVWVADSNGLRI 422

Query: 295 ERLTNTLFINISASYS--PDSSQIVFE---SDREGKE-QLYVMQSNGSDQKRISQDKEA- 347
              T       S  +S  P    +      S   G+  Q+  + +  S  +R  Q  +  
Sbjct: 423 VYETKGPDNIFSPVWSQNPQDDTLYVCMGPSFNAGQSLQICAIPNVASGARRRRQLTKGF 482

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKF----AIGVMK-------KDGSQERLLVEDSNLQAPT 396
           +   P  SP G  + F             + +M+        DG   RL           
Sbjct: 483 NNAFPSTSPDGTKLVFRSTRDGGDKKYKNLYIMEDAQVGEYGDGKITRLTNGPWTDTHCQ 542

Query: 397 WSPSGRSLIFSRKKD 411
           WSP G  ++FS  +D
Sbjct: 543 WSPRGDWIVFSSTRD 557



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 24/168 (14%)

Query: 271 RALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             +    KD + D       +Y  +L++  T+RLT +   ++S S SP   +I   S + 
Sbjct: 145 SLIYVTTKDPSTDRRQPWTVVYKTNLKTGKTDRLTPSGVNDLSPSVSPSRRKIAVASFQG 204

Query: 324 G---------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                     +  +YVM        R+   K   +  P W    ++I F +  G+ +++ 
Sbjct: 205 KGWNGEIEDLRTDIYVMNIEKPPLGRMRVIKNGGW--PTWGSD-NVIFFHRKVGKFWSVF 261

Query: 375 VMKKDGSQER----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  Q      +  +  N   P  + +   +  +  +     S +
Sbjct: 262 RADISNGQTSETVCVTPDGINAITPA-AINSTKVAVATIRQESKFSDI 308



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 100/306 (32%), Gaps = 46/306 (15%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRY----LTPSRDQILFEPRFSPNQQKVAYA 229
           +  +++V+    S   +    V+ +   N++                P  SP+++K+A A
Sbjct: 143 DYSLIYVTTKDPSTDRRQPWTVVYK--TNLKTGKTDRLTPSGVNDLSPSVSPSRRKIAVA 200

Query: 230 TYDDED--------ILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDE 280
           ++  +            +Y+M+       + R+         P + S+        +  +
Sbjct: 201 SFQGKGWNGEIEDLRTDIYVMNIEKPPLGRMRVIKNGGW---PTWGSD-NVIFFHRKVGK 256

Query: 281 AMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIV--------FESDREGKEQLY 329
              ++  D+ +  T     +T      I+ +    +   V        F   R   +  +
Sbjct: 257 FWSVFRADISNGQTSETVCVTPDGINAITPAAINSTKVAVATIRQESKFSDIRLEAQYRH 316

Query: 330 VMQSNGSDQK---RISQDKE--ASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKK 378
           +   + +  +   +I+Q     A +F+P     G  I + +       +G+       K 
Sbjct: 317 IEIFDSTAPQQSIQITQKTRSKADHFNPFIIDGGKRIGYHRCKSDLVKNGDDIQRHFHKL 376

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYA 437
           +     + +   +   PT+S  G  L F   +       ++  D NG R       P   
Sbjct: 377 NSPHPDVGLFRVSGVFPTFSVDGSKLAFVDNE----FKAVWVADSNGLRIVYETKGPDNI 432

Query: 438 SDPQWV 443
             P W 
Sbjct: 433 FSPVWS 438


>gi|297568574|ref|YP_003689918.1| WD40 domain protein beta Propeller [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296924489|gb|ADH85299.1| WD40 domain protein beta Propeller [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 991

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 52/298 (17%), Positives = 88/298 (29%), Gaps = 58/298 (19%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G         R   +  PRFS + + +AY          V L++    +  +      + 
Sbjct: 305 GETRGQQLTRRGYRIGAPRFSNDGRWLAYTESGARAYPAVRLLNLADGKDRELTKALGTG 364

Query: 260 ILAPRFSSNGKRALISV-----QKDEAMDIYSVDLQSNATERLTNT-------------- 300
            L+  FS + +    S        +   D+Y  +L    T+RLT                
Sbjct: 365 GLS--FSPDDRWLAFSRWERVRSYELYSDLYLYNLAKGETKRLTTGARLRDPDFHPRDHL 422

Query: 301 --------------------------------LFINISASYSPDSSQIVFESDREGKEQL 328
                                             I     +SPD   +   + R+G+  L
Sbjct: 423 LVAVREGEGTTALMLVNPDSGELQPLRPNETDPVIYGRPRWSPDGRSLAVVAWRQGRPGL 482

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-VMKKDGSQERLLV 387
            V+ ++  +   +     A+   PVWS  GD + FT        I  +    G  E++  
Sbjct: 483 EVIAADSGETASLLAVAGATLAWPVWSRDGDHLYFTYDRNGIHNIYRLQPASGDLEQVTN 542

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY----SIDLNGRNETLINTPAYASDPQ 441
                  P   P    L+F+          L     +I +     T    P  A+DP 
Sbjct: 543 VVGGAFEPALCPQSGRLVFADYSARGYDLMLLEEYPAIAVPPPQPTAPALPQAAADPS 600



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 45/206 (21%), Positives = 79/206 (38%), Gaps = 15/206 (7%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEA-MDIYSVDLQSNATERLTNTLFINISA 307
             +++      I APRFS++G+    +     A   +  ++L       LT  L      
Sbjct: 308 RGQQLTRRGYRIGAPRFSNDGRWLAYTESGARAYPAVRLLNLADGKDRELTKALGT-GGL 366

Query: 308 SYSPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           S+SPD   + F         E    LY+      + KR++    A   DP + P+  L+ 
Sbjct: 367 SFSPDDRWLAFSRWERVRSYELYSDLYLYNLAKGETKRLTTG--ARLRDPDFHPRDHLLV 424

Query: 363 FTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +      A+ ++  D  + + L     +      P WSP GRSL     + G  G ++
Sbjct: 425 AVREGEGTTALMLVNPDSGELQPLRPNETDPVIYGRPRWSPDGRSLAVVAWRQGRPGLEV 484

Query: 419 YSIDLNGRNETLINTPAYA-SDPQWV 443
            + D +G   +L+       + P W 
Sbjct: 485 IAAD-SGETASLLAVAGATLAWPVWS 509


>gi|298245430|ref|ZP_06969236.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297552911|gb|EFH86776.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 695

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 75/204 (36%), Gaps = 14/204 (6%)

Query: 205 YLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           Y        ++   +SP + +++A  + D      V + +      P         + A 
Sbjct: 397 YTYKGHTGTVYAVAWSPPDGKRIASGSDDG----TVQVWNAADGSQPYTYKGHTGTVYAV 452

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +S +GKR   S   D  + +++     +          I  + ++SPD  +I   SD +
Sbjct: 453 AWSPDGKRIA-SGSDDGTVQVWNA-ADGSQPYTYKGHSAIVRAVAWSPDGKRIASGSD-D 509

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  Q++   ++GS             +   WSP G  IA     G  F + V       +
Sbjct: 510 GAVQVWNA-ADGSQPYTYKGHSSFGVYAVAWSPDGKRIA---SGGFDFTVQVWNAADGSQ 565

Query: 384 RLLVED--SNLQAPTWSPSGRSLI 405
                   S +++  WSP G+ ++
Sbjct: 566 PYTYNGNPSVVESVAWSPDGKRIV 589



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 81/233 (34%), Gaps = 18/233 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG    ++ V +    +  Y        ++   +SP+ +++A  + D      V +
Sbjct: 417 KRIASGSDDGTVQVWNAADGSQPYTYKGHTGTVYAVAWSPDGKRIASGSDDG----TVQV 472

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +      P       +++ A  +S +GKR   S   D A+ +++    S       ++ 
Sbjct: 473 WNAADGSQPYTYKGHSAIVRAVAWSPDGKRIA-SGSDDGAVQVWNAADGSQPYTYKGHSS 531

Query: 302 FINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           F   + ++SPD  +I       G    + V  +    Q        +      WSP G  
Sbjct: 532 FGVYAVAWSPDGKRIA----SGGFDFTVQVWNAADGSQPYTYNGNPSVVESVAWSPDGKR 587

Query: 361 IAFTKFSGEKFA-IGVMKKDGSQERLLVED-------SNLQAPTWSPSGRSLI 405
           I    +       + V       +  + +        S + A  WSP G+ + 
Sbjct: 588 IVSGSWGNTVDNTVQVWNAADGNQPYIYKGHFHGVYASGVYAVAWSPDGKRIA 640



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 82/234 (35%), Gaps = 20/234 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG    ++ V +    +  Y       I+    +SP+ +++A  + D    ++V+ 
Sbjct: 459 KRIASGSDDGTVQVWNAADGSQPYTYKGHSAIVRAVAWSPDGKRIASGSDD--GAVQVWN 516

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                     +  +    + A  +S +GKR   S   D  + +++     +         
Sbjct: 517 AADGSQPYTYKGHSSFG-VYAVAWSPDGKRIA-SGGFDFTVQVWNA-ADGSQPYTYNGNP 573

Query: 302 FINISASYSPDSSQIVFESDREGK---EQLYVMQSNGSDQKRISQDKEASYFDP-----V 353
            +  S ++SPD  +IV  S   G      + V  +   +Q  I +      +        
Sbjct: 574 SVVESVAWSPDGKRIV--SGSWGNTVDNTVQVWNAADGNQPYIYKGHFHGVYASGVYAVA 631

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLI 405
           WSP G  IA   +      + V       +    +     ++   WSP G+ + 
Sbjct: 632 WSPDGKRIASGGWDNT---VQVWNAADGSQPYTYKGHADGVEVVAWSPDGKRIA 682



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 61/154 (39%), Gaps = 8/154 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG    ++ V +    +  Y       ++    +SP+ +++   ++ +     V +
Sbjct: 544 KRIASGGFDFTVQVWNAADGSQPYTYNGNPSVVESVAWSPDGKRIVSGSWGNTVDNTVQV 603

Query: 242 MDTRIDRAPKRI-----GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            +      P        G + S + A  +S +GKR   S   D  + +++    S     
Sbjct: 604 WNAADGNQPYIYKGHFHGVYASGVYAVAWSPDGKRIA-SGGWDNTVQVWNAADGSQPYTY 662

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             +   + + A +SPD  +I   SD +   Q+++
Sbjct: 663 KGHADGVEVVA-WSPDGKRIASGSD-DHTVQVWI 694



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 51/143 (35%), Gaps = 17/143 (11%)

Query: 308 SYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++SP D  +I   SD +G  Q++   +    Q    +    + +   WSP G  IA    
Sbjct: 410 AWSPPDGKRIASGSD-DGTVQVW--NAADGSQPYTYKGHTGTVYAVAWSPDGKRIASGSD 466

Query: 367 SGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            G          DGSQ        + ++A  WSP G+ +        D   ++++   +G
Sbjct: 467 DGTVQVWNA--ADGSQPYTYKGHSAIVRAVAWSPDGKRIASGSD---DGAVQVWNA-ADG 520

Query: 426 RNETLINTPAYASDP----QWVG 444
                     ++S       W  
Sbjct: 521 S--QPYTYKGHSSFGVYAVAWSP 541


>gi|254415180|ref|ZP_05028942.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
            PCC 7420]
 gi|196177986|gb|EDX72988.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
            PCC 7420]
          Length = 1656

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 59/345 (17%), Positives = 119/345 (34%), Gaps = 33/345 (9%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
            +S     Q + +       + W   G    V             V F      D +++  
Sbjct: 1268 VSFSPDGQTLASASKDSTVKLW---GLDGKVVQTFQGHNNGIRSVNFS----PDGQRLAS 1320

Query: 142  KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDG 200
                     W      + + + Q++ G     NS     +  +  S    N++ +   DG
Sbjct: 1321 ASNDGVVKLW-----YLENTVVQTLQGHNDGINSITFSPNGKIIASASNDNTVKLWHLDG 1375

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              ++     +D +     FSP+ Q +A  + DD+ I++++ +D  + +  +     R  +
Sbjct: 1376 TVVQTFQEHKDWVNSV-SFSPDGQMIA--SADDKGIVKLWYLDGTVVQTFQE---HRGGV 1429

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                FS +G     S   D ++ ++ +D      + L        S S+SPD   I    
Sbjct: 1430 SCVNFSPDGSIIASSSLYDLSVKLWHLD--GTVVQTLQQHSNWVKSVSFSPDGQIIA--- 1484

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                 EQ+  +        +             +SP G +IA     G    + +   DG
Sbjct: 1485 --SACEQVIKLWHLDGSLVQTFLGHRGGIKSVSFSPDGQIIASADTDG---IVKLWCLDG 1539

Query: 381  SQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +        S+   + ++SP G+ +  +     D+  KL+ +  N
Sbjct: 1540 TVLHTFQGHSDWVNSVSFSPDGKMIASASS---DSTVKLWCVTGN 1581



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 82/219 (37%), Gaps = 19/219 (8%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            +   DG ++ Y    R   +   RFSP+ Q++A A+YD      V L            G
Sbjct: 1124 IWHIDGTSV-YTFQERGYGVNSVRFSPDSQRIALASYDG----IVSLWHLDGTLFQTFQG 1178

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDS 313
            + R  +    FS +G+    S   D  + ++ +D       +        +S  ++SP+ 
Sbjct: 1179 HNRG-VSCVSFSPDGQMIA-SASHDHTIKLWYLD---GTLLQTFQGHNRGVSCVNFSPNG 1233

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
              I   S+ +   +L+ +     +  R  Q      +   +SP G  +A          +
Sbjct: 1234 QIIASASE-DNTVKLWHID---GELMRTFQKHSDKVYCVSFSPDGQTLASASKDST---V 1286

Query: 374  GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
             +   DG   +     ++ +++  +SP G+ L  +    
Sbjct: 1287 KLWGLDGKVVQTFQGHNNGIRSVNFSPDGQRLASASNDG 1325



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/208 (21%), Positives = 75/208 (36%), Gaps = 23/208 (11%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ Q +A       D   V L            G+ R +     FS N +    S  
Sbjct: 1064 TFSPDGQTIA----SAGDDSTVKLWSLDGILLKSLPGHNRGVN-CVSFSPNNQMIA-SAS 1117

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                  I+ +D  S  T +      +N S  +SPDS +I   S  +G   L+ +      
Sbjct: 1118 SGGTAKIWHIDGTSVYTFQ-ERGYGVN-SVRFSPDSQRIALASY-DGIVSLWHLD---GT 1171

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT- 396
              +  Q          +SP G +IA          I +   DG+  +      + +  + 
Sbjct: 1172 LFQTFQGHNRGVSCVSFSPDGQMIASASHD---HTIKLWYLDGTLLQ--TFQGHNRGVSC 1226

Query: 397  --WSPSGRSLIFSRKKDGDTGSKLYSID 422
              +SP+G+ +  + +   D   KL+ ID
Sbjct: 1227 VNFSPNGQIIASASE---DNTVKLWHID 1251



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 65/169 (38%), Gaps = 16/169 (9%)

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI 316
              + +  FS +G+    S   D  + ++S+D      + L  +   +N   S+SP++  I
Sbjct: 1058 GAVNSVTFSPDGQTIA-SAGDDSTVKLWSLD--GILLKSLPGHNRGVNCV-SFSPNNQMI 1113

Query: 317  VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
               S   G  +++ +           Q++        +SP    IA   + G    + + 
Sbjct: 1114 ASASS-GGTAKIWHID---GTSVYTFQERGYGVNSVRFSPDSQRIALASYDG---IVSLW 1166

Query: 377  KKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              DG+  +     +  +   ++SP G+ +  +     D   KL+ +D  
Sbjct: 1167 HLDGTLFQTFQGHNRGVSCVSFSPDGQMIASASH---DHTIKLWYLDGT 1212



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 42/126 (33%), Gaps = 11/126 (8%)

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             L    S ++SPD   I    D      + +   +G   K +            +SP   
Sbjct: 1056 HLGAVNSVTFSPDGQTIASAGD---DSTVKLWSLDGILLKSL-PGHNRGVNCVSFSPNNQ 1111

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +IA +  SG    I     DG+      E    + +  +SP  + +  +     D    L
Sbjct: 1112 MIA-SASSGGTAKIW--HIDGTSVYTFQERGYGVNSVRFSPDSQRIALASY---DGIVSL 1165

Query: 419  YSIDLN 424
            + +D  
Sbjct: 1166 WHLDGT 1171



 Score = 40.8 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 33/83 (39%), Gaps = 7/83 (8%)

Query: 343  QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSG 401
                 +     +SP G  IA    +G+   + +   DG   + L   +  +   ++SP+ 
Sbjct: 1054 YGHLGAVNSVTFSPDGQTIA---SAGDDSTVKLWSLDGILLKSLPGHNRGVNCVSFSPNN 1110

Query: 402  RSLIFSRKKDGDTGSKLYSIDLN 424
            + +  S    G   +K++ ID  
Sbjct: 1111 QMIA-SASSGGT--AKIWHIDGT 1130


>gi|145542750|ref|XP_001457062.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124424876|emb|CAK89665.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2818

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 102/279 (36%), Gaps = 17/279 (6%)

Query: 160  DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            + +Y     E G  +         + SG    S+ + D      +       + +    F
Sbjct: 2136 NSVYSLYGHESGILSVCFSPDGTILASGSGDKSIRLWDIKTGQQKAKLDGHSREVHSVNF 2195

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+   +A  +YD      + L D +      ++  + S   +  FS +G    +++   
Sbjct: 2196 SPDGTTLASGSYDQ----SIRLWDVKTGLQKVKLDGYSSADYSVNFSPDGTTLSVAMCGG 2251

Query: 280  EAMDIYSV-DLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            E   +  + DL++         + +     S  +SPD + + F  +R     +Y++    
Sbjct: 2252 EQEFLICLWDLKTGQKTEFQFYSKSFSNAQSICFSPDGTTVAFVKERYSSISIYLLHVKT 2311

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVED--S 390
               K I    +++     +SP    +AF           ++ +   +  QE+ ++E    
Sbjct: 2312 GKIKDILYVDQSNCNSVCFSPDCTKLAFGGGGRIGDGDCSLYLWDLNTRQEKAIIERHYG 2371

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +    +SP G +L F+ ++      K++  ++    + 
Sbjct: 2372 PISLVCFSPEGTTLAFASEE----YQKIWLWNVTTEQQK 2406



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/320 (15%), Positives = 99/320 (30%), Gaps = 35/320 (10%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        RLWDVK   Q +    +SS               Y       G   S 
Sbjct: 2200 TTLASGSYDQSIRLWDVKTGLQKVKLDGYSSAD-------------YSVNFSPDGTTLSV 2246

Query: 177  ILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDE 234
             +        G  +  +C+ D + G    +   S+     +   FSP+   VA+      
Sbjct: 2247 AM------CGGEQEFLICLWDLKTGQKTEFQFYSKSFSNAQSICFSPDGTTVAFVKERYS 2300

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQS 291
             I  +YL+  +  +    +   +S   +  FS +  +              S+   DL +
Sbjct: 2301 SI-SIYLLHVKTGKIKDILYVDQSNCNSVCFSPDCTKLAFGGGGRIGDGDCSLYLWDLNT 2359

Query: 292  NATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
               + +            +SP+ + + F S+    +++++       QK I         
Sbjct: 2360 RQEKAIIERHYGPISLVCFSPEGTTLAFASEE--YQKIWLWNVTTEQQKGILDCHSGKIL 2417

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               +S    L        +  +I +      Q++ +   S +    +SP G +L      
Sbjct: 2418 SICFSSDSTL----ACGSDDMSIRLWDVRTGQQQHVGHSSKVNTVCFSPDGTTLA---SG 2470

Query: 411  DGDTGSKLYSIDLNGRNETL 430
              D   +L+ +    +   L
Sbjct: 2471 SSDNSIRLWDVKTGQQKAKL 2490



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 103/308 (33%), Gaps = 42/308 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        RLWDVK  +Q                 H  S ++Y       G     
Sbjct: 2465 TTLASGSSDNSIRLWDVKTGQQKAKLD-----------GH--SREVYSVNFSPDG----- 2506

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                  ++ SG   NS+ + D      +         +    FSP+   +A  +YD+   
Sbjct: 2507 -----TTLASGSRDNSIRLWDVKTGLQKAKLDGHSYYVTSFNFSPDGTTLASGSYDN--- 2558

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              + L D +  +   ++    + + +  FS +      S   D ++ ++  D+++   + 
Sbjct: 2559 -SIRLWDVKTRQQKVKLDGHSNNVNSICFSPDSTTLA-SGSDDFSIRLW--DVKTGQQKA 2614

Query: 297  LTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
              +    N+ S  +SPDS  +   SD      + +       QK              +S
Sbjct: 2615 KLDGHSNNVNSICFSPDSITLASGSD---DYSICLWDVKTGYQKAKLDGHSREVHSVNFS 2671

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGD 413
            P G  +A + +      I +      Q++  ++  +    +  +SP G +L        D
Sbjct: 2672 PDGTTLASSSYDTS---IRLWDVKTRQQKAKLDGHSEAVYSVNFSPDGTTLA---SGSND 2725

Query: 414  TGSKLYSI 421
               +L+ +
Sbjct: 2726 NSIRLWDV 2733



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 60/179 (33%), Gaps = 30/179 (16%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        RLWDVK  +Q                 H  S+++              
Sbjct: 2591 TTLASGSDDFSIRLWDVKTGQQKAKLD-----------GH--SNNVNSICFSPD------ 2631

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                S ++ SG    S+C+ D      +       + +    FSP+   +A ++YD    
Sbjct: 2632 ----SITLASGSDDYSICLWDVKTGYQKAKLDGHSREVHSVNFSPDGTTLASSSYDT--- 2684

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              + L D +  +   ++      + +  FS +G     S   D ++ ++  D+++   +
Sbjct: 2685 -SIRLWDVKTRQQKAKLDGHSEAVYSVNFSPDGTTLA-SGSNDNSIRLW--DVRTRQQK 2739


>gi|149173999|ref|ZP_01852627.1| probable TolB protein (Precursor) [Planctomyces maris DSM 8797]
 gi|148846979|gb|EDL61314.1| probable TolB protein (Precursor) [Planctomyces maris DSM 8797]
          Length = 309

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 81/235 (34%), Gaps = 18/235 (7%)

Query: 186 SGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           +G+ +        +G     ++ P        P FSP+ QK+A+     ++  +      
Sbjct: 30  AGVKRVRFYTAPSEGGEANLFIVPGEYYTAGSPVFSPDGQKLAFDGRKSQEGEKFSDGKI 89

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFI 303
               A           + P +S  G R   S +    A     +    +  E +      
Sbjct: 90  ITVNADGTNLEAIGSGVMPSWSPAGNRIAFSQISPSGAA---LMHADGSHREMI---EAG 143

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS----YFDPVWSPQGD 359
              A +SPD  +I +      K  + V       +  +    E+     Y++  WSP  +
Sbjct: 144 GWGAQWSPDGKKIAYTVRSGNKANIRVYDLVEGTRTDLFPAGESPYSSIYWNMTWSPDSN 203

Query: 360 LIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSR 408
            I F   +  +  + I  +   G Q+   V  SN  AP     W PSG  ++F+ 
Sbjct: 204 WICFKGRNANESTYEIATVNAAGKQQGYKVHYSNKTAPYADIAWHPSGEKIVFAA 258



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 26/183 (14%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDS 313
             +P FS +G++     +K +  +      I +V+      E + +     +  S+SP  
Sbjct: 59  AGSPVFSPDGQKLAFDGRKSQEGEKFSDGKIITVNADGTNLEAIGSG----VMPSWSPAG 114

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           ++I F   +       +M ++GS ++ I    EA  +   WSP G  IA+T  SG K  I
Sbjct: 115 NRIAFS--QISPSGAALMHADGSHREMI----EAGGWGAQWSPDGKKIAYTVRSGNKANI 168

Query: 374 GVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            V          L      ++P        TWSP    + F  +   ++  ++ +++  G
Sbjct: 169 RVYDLVEGTRTDLFPAG--ESPYSSIYWNMTWSPDSNWICFKGRNANESTYEIATVNAAG 226

Query: 426 RNE 428
           + +
Sbjct: 227 KQQ 229



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 93/267 (34%), Gaps = 29/267 (10%)

Query: 164 QSITGEKGDFNS---RILFVSESVVSGII--KNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +  T     F+    ++ F       G       +  ++ DG N+  +          P 
Sbjct: 55  EYYTAGSPVFSPDGQKLAFDGRKSQEGEKFSDGKIITVNADGTNLEAIGSG-----VMPS 109

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP   ++A++           LM                      +S +GK+   +V+ 
Sbjct: 110 WSPAGNRIAFSQISPSGAA---LMHADGSHREMIEAGGWGAQ----WSPDGKKIAYTVRS 162

Query: 279 DEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVF--ESDREGKEQLYVM 331
               +I   DL       L     +    I  + ++SPDS+ I F   +  E   ++  +
Sbjct: 163 GNKANIRVYDLVEGTRTDLFPAGESPYSSIYWNMTWSPDSNWICFKGRNANESTYEIATV 222

Query: 332 QSNGSDQ--KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLL 386
            + G  Q  K    +K A Y D  W P G+ I F   +  +  +     +        + 
Sbjct: 223 NAAGKQQGYKVHYSNKTAPYADIAWHPSGEKIVFAAGAQPRQLMQFNPAEDKPPAPIEIK 282

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           V  + +    ++P G+SL+F+    G+
Sbjct: 283 VNGTIIGDVCFTPDGQSLLFNVSGTGE 309


>gi|258593589|emb|CBE69930.1| putative WD40 domain protein beta Propeller precursor [NC10
           bacterium 'Dutch sediment']
          Length = 529

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 49/334 (14%), Positives = 101/334 (30%), Gaps = 56/334 (16%)

Query: 159 SDDIYQSITGEKGDFN---------SRILFVSESVVSG---IIKNSLCVMDRDGANIRYL 206
           +   Y  +T   GD +         +RI F S   ++G        + +        +  
Sbjct: 42  AQYTYSQLTTTTGDGSASPSISADGTRIAFRSNRNLTGGNSDGNYEIFLWISGSGFTQIT 101

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDD------EDILRVYLMDTRIDRAPKRIGNFRSMI 260
             + D        S +  ++A+ +  +      +    ++L         +         
Sbjct: 102 DTTGDSTYSYLSISADGTRIAFRSNRNLTGGNSDGNYEIFLW-ISGSGFTQITDTTGGEN 160

Query: 261 LAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLT--NTLFINISASYS 310
             P  S++G R      +        D   +I+ +    +   ++T  N    + + S +
Sbjct: 161 FTPFISADGTRIAFGSNRNLVTGGNLDGNPEIF-LWTAGSGFTQVTATNGASTHYNPSIN 219

Query: 311 PDSSQIVFESDRE-------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            D ++I F S  +          ++++    GS   +I+   E     P  S  G  IAF
Sbjct: 220 ADGTRIAFYSTHDLTGSNLDHNSEIFLWTF-GSGVIQITNTTEGGSDTPSISADGTRIAF 278

Query: 364 TKFSG--------EKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKK---- 410
                          + I +        ++    +     P  S  G  + F   +    
Sbjct: 279 VSTGNPVPGGNLDGNYEIFLWTASSGFTQVTATTEGYNWQPFISADGTRIAFGSNRNLTG 338

Query: 411 ---DGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              DG+  + L++         L  T A  S  Q
Sbjct: 339 SNPDGNWETFLWTAFF--GFAQLTTTTAGVSSGQ 370



 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/280 (14%), Positives = 93/280 (33%), Gaps = 44/280 (15%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDD------EDILRVYLMDTRIDRAPKRIGNFRS 258
            LT +       P  S +  ++A+ +  +      +    ++L  +             S
Sbjct: 48  QLTTTTGDGSASPSISADGTRIAFRSNRNLTGGNSDGNYEIFLWISGSGFTQITDTTGDS 107

Query: 259 MILAPRFSSNGKRALISVQK-------DEAMDIYSVDLQSNATERLTNT-LFINISASYS 310
                  S++G R      +       D   +I+ + +  +   ++T+T    N +   S
Sbjct: 108 TYSYLSISADGTRIAFRSNRNLTGGNSDGNYEIF-LWISGSGFTQITDTTGGENFTPFIS 166

Query: 311 PDSSQIVFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            D ++I F S+R        +G  ++++  +     +  + +  +++++P  +  G  IA
Sbjct: 167 ADGTRIAFGSNRNLVTGGNLDGNPEIFLWTAGSGFTQVTATNGASTHYNPSINADGTRIA 226

Query: 363 FTKFSG-------EKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSR------ 408
           F                I +        ++    +     P+ S  G  + F        
Sbjct: 227 FYSTHDLTGSNLDHNSEIFLWTFGSGVIQITNTTEGGSDTPSISADGTRIAFVSTGNPVP 286

Query: 409 --KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
               DG+    L++   +G  +    T  Y     W  F+
Sbjct: 287 GGNLDGNYEIFLWTAS-SGFTQVTATTEGYN----WQPFI 321



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 82/236 (34%), Gaps = 40/236 (16%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQK-------DEAMDIYSVDLQSNATERLTNTL 301
             +          +P  S++G R      +       D   +I+ + +  +   ++T+T 
Sbjct: 46  YSQLTTTTGDGSASPSISADGTRIAFRSNRNLTGGNSDGNYEIF-LWISGSGFTQITDTT 104

Query: 302 FINISA--SYSPDSSQIVFESDR-------EGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             +  +  S S D ++I F S+R       +G  ++++   +GS   +I+       F P
Sbjct: 105 GDSTYSYLSISADGTRIAFRSNRNLTGGNSDGNYEIFLW-ISGSGFTQITDTTGGENFTP 163

Query: 353 VWSPQGDLIAFTKFSG--------EKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGR 402
             S  G  IAF                 I +        ++   +       P+ +  G 
Sbjct: 164 FISADGTRIAFGSNRNLVTGGNLDGNPEIFLWTAGSGFTQVTATNGASTHYNPSINADGT 223

Query: 403 SLIFSRKKD-----GDTGSKLY-------SIDLNGRNETLINTPAYASDPQWVGFM 446
            + F    D      D  S+++        I +    E   +TP+ ++D   + F+
Sbjct: 224 RIAFYSTHDLTGSNLDHNSEIFLWTFGSGVIQITNTTEGGSDTPSISADGTRIAFV 279



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 73/245 (29%), Gaps = 29/245 (11%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +  F S    V+   + G  +  L      G      T       + P  + +  ++A+ 
Sbjct: 171 RIAFGSNRNLVTGGNLDGNPEIFLWTAGS-GFTQVTATNGAS-THYNPSINADGTRIAFY 228

Query: 230 TYDD------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----- 278
           +  D      +    ++L                     P  S++G R            
Sbjct: 229 STHDLTGSNLDHNSEIFLWTFGSGVIQITNTTEGGSDT-PSISADGTRIAFVSTGNPVPG 287

Query: 279 ---DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-------EGKEQL 328
              D   +I+     S  T+    T   N     S D ++I F S+R       +G  + 
Sbjct: 288 GNLDGNYEIFLWTASSGFTQVTATTEGYNWQPFISADGTRIAFGSNRNLTGSNPDGNWET 347

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           ++  +      +++            +  G  IAF   S           DG+ E +L  
Sbjct: 348 FLWTAFFGFA-QLTTTTAGVSSGQSLNTDGTKIAFVSTSNLTGG----NPDGNPEIILAS 402

Query: 389 DSNLQ 393
             +++
Sbjct: 403 SPSVE 407


>gi|256377038|ref|YP_003100698.1| hypothetical protein Amir_2931 [Actinosynnema mirum DSM 43827]
 gi|255921341|gb|ACU36852.1| WD40 domain protein beta Propeller [Actinosynnema mirum DSM 43827]
          Length = 1029

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 50/308 (16%), Positives = 101/308 (32%), Gaps = 48/308 (15%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V    V G     L  +D DG N+R +TP        P  SP+  +VA++        ++
Sbjct: 133 VVFQQVRGDGSGELWAVDVDGTNLRRITPEGADPEEWPTISPDGLRVAFSA-----GGQI 187

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                    + +           P +     R +  V    A      D  S        
Sbjct: 188 RSRPLAGGPSTQLTDEPGGGAGEPVWHPTEDRIVYKVGAGRARLRVLEDGASRDFFAENQ 247

Query: 300 TLFINISASYSPDSSQIVFES----DREGKEQLYVMQSNGSDQ----KRISQDKEASYFD 351
             +      + PD   ++F S    + + +E +Y +  +G +      ++   ++     
Sbjct: 248 AGWNGRWPVWMPDGQGLLFISCGCLEEDPREGVYRVAGDGGEPVGAAPQLLLREDRQVSA 307

Query: 352 PVWSPQ---GDLIAFTKFSGEKFAIGVMK--KDGSQE------------------RLLVE 388
           P W      G L+     +  +  + +     DG+                    RLL +
Sbjct: 308 PAWIGDPLTGTLLIARTTASVRNEVRLQDIQPDGTDPRDLGIALALEHPDIASDSRLLFK 367

Query: 389 DSNLQAP-----TWSPSGRSLIFSRKKD--GDTGSKLYSIDLNGRNETLINTP-----AY 436
            +    P     T+SP GR ++++  +   G    ++++ + +G +   +N        +
Sbjct: 368 PTGGYDPWTLRQTYSPDGRKIVYTAFEGPLGSRLQRIWTANADGSDPVRLNVSDRLPTDW 427

Query: 437 ASDPQWVG 444
             DP W  
Sbjct: 428 EFDPAWSP 435



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 112/349 (32%), Gaps = 80/349 (22%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL---------------------TPS 209
           GD  +  L ++ +  S   +  L  +  DG + R L                     T  
Sbjct: 312 GDPLTGTLLIARTTASVRNEVRLQDIQPDGTDPRDLGIALALEHPDIASDSRLLFKPTGG 371

Query: 210 RDQILFEPRFSPNQQKVAYATYDDE---DILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
            D       +SP+ +K+ Y  ++      + R++  +       +   + R        P
Sbjct: 372 YDPWTLRQTYSPDGRKIVYTAFEGPLGSRLQRIWTANADGSDPVRLNVSDRLPTDWEFDP 431

Query: 264 RFSSNGKRALISVQKDEAMD-------IYSVDLQSNA-TERLTNTLFI----NISASYSP 311
            +S NG++  I+ +    +        I  VD  +      L          +   ++SP
Sbjct: 432 AWSPNGEQIAITRRSPGGIRPDNGPSRIAVVDASTGQVLRELVAPPGAEDQEDTQPAWSP 491

Query: 312 DSSQIVFES-----DREGK----EQLYVMQSNG-SDQKRISQDKEASYFDP-------VW 354
           D   + F       D  G       ++   +    +Q+ IS+    +           V+
Sbjct: 492 DGRTLSFTRGVVFDDETGTEVRDNHIWTADAATLGNQRDISEIVCGAASPCEVTDDSSVF 551

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAP-------------TWSP 399
           SP    + F +      +      D    R+LV        AP              +SP
Sbjct: 552 SPDSGDLVFNREQDALISF---DLDRETCRVLVPQGSTQCGAPVVNGSGPFQPRDAAFSP 608

Query: 400 SGRSLIFSRKKD--GDTGSKLYSID-LNGR-NETLIN--TPAYASDPQW 442
            G  L+ S ++    +    L  +D ++G  +E+ +N   P    +P W
Sbjct: 609 EGGRLVVSTRRGAASEQPETLALVDFVDGGLSESRVNYALPGRQKEPSW 657


>gi|269838112|ref|YP_003320340.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269787375|gb|ACZ39518.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 635

 Score = 98.2 bits (243), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 93/269 (34%), Gaps = 50/269 (18%)

Query: 220 SPNQQKVAYA-----TYDDEDILRVYLMDTRIDRAPK-----RIGNFRSMILAPRFSSNG 269
           SP+ + VA+        + +    ++L       A +      +G+   M   PR+S +G
Sbjct: 24  SPDGRHVAFTVAPIGHKETKPTSAIWLAAVEDGEAREFTMGAVVGHEDKM---PRWSPDG 80

Query: 270 KRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----- 322
           +       +    A  I+ +DL+      LT+        +++PD   +   +DR     
Sbjct: 81  RTLAFLSDRTERGAHQIHLIDLEGGEARPLTSVPKGLDLLAWAPDGRSLTATADRRALAG 140

Query: 323 -------------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                        + + ++ V         R+    E   +   WS  G  +A     G 
Sbjct: 141 EDKPATEVRVASADARPRVIVRVPVEGGTVRVLGPAEGHVWAYAWSADGRRVAALTTPGN 200

Query: 370 KF-------AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDT-GSKL 418
                     + V+      ER+L        P    WSP G  L+      G    +++
Sbjct: 201 GLDEPARGVRLLVIDPATRAERVLTT--LDNLPATLQWSPDGSRLVAVANVPGSADDTRV 258

Query: 419 YSIDL-NGRNETLINTPAYASDPQWVGFM 446
             ID  +G  ETL    A A+ P W G++
Sbjct: 259 LLIDAESGAIETL---EAGATTPLWAGWL 284



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 69/220 (31%), Gaps = 44/220 (20%)

Query: 265 FSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTL---FINISASYSPDSSQ 315
            S +G+    +V      +      I+   ++       T        +    +SPD   
Sbjct: 23  VSPDGRHVAFTVAPIGHKETKPTSAIWLAAVEDGEAREFTMGAVVGHEDKMPRWSPDGRT 82

Query: 316 IVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----------- 362
           + F SDR   G  Q++++   G + + ++   +       W+P G  +            
Sbjct: 83  LAFLSDRTERGAHQIHLIDLEGGEARPLTSVPKGLDLL-AWAPDGRSLTATADRRALAGE 141

Query: 363 --------FTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                             I  +  +G   R+L   + ++ A  WS  GR +         
Sbjct: 142 DKPATEVRVASADARPRVIVRVPVEGGTVRVLGPAEGHVWAYAWSADGRRVAALTTPGNG 201

Query: 414 -----TGSKLYSIDLNGRNETLINT----PAYASDPQWVG 444
                 G +L  ID   R E ++ T    PA     QW  
Sbjct: 202 LDEPARGVRLLVIDPATRAERVLTTLDNLPATL---QWSP 238



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 13/111 (11%)

Query: 336 SDQKRISQDKEASY---FDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLL 386
           + ++R + D   +     D   SP G  +AFT      K +    AI +   +  + R  
Sbjct: 2   TSKQRYTPDHAVNLRIASDVQVSPDGRHVAFTVAPIGHKETKPTSAIWLAAVEDGEAREF 61

Query: 387 VEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              +      + P WSP GR+L F   +      +++ IDL G     + +
Sbjct: 62  TMGAVVGHEDKMPRWSPDGRTLAFLSDRTERGAHQIHLIDLEGGEARPLTS 112



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 92/275 (33%), Gaps = 18/275 (6%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  L D++  +    +   S P     +A         +    +             V S
Sbjct: 96  QIHLIDLEGGE---ARPLTSVPKGLDLLAWAPDGRSLTATADRRALAGEDKPATEVRVAS 152

Query: 187 GIIKNSLCV-MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-----YDDEDILRVY 240
              +  + V +  +G  +R L P+   + +   +S + ++VA  T      D+       
Sbjct: 153 ADARPRVIVRVPVEGGTVRVLGPAEGHV-WAYAWSADGRRVAALTTPGNGLDEPARGVRL 211

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---IYSVDLQSNATERL 297
           L+     RA + +    ++    ++S +G R +       + D   +  +D +S A E L
Sbjct: 212 LVIDPATRAERVLTTLDNLPATLQWSPDGSRLVAVANVPGSADDTRVLLIDAESGAIETL 271

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRI--SQDKEASYFDPVW 354
                  + A + P     +     EG   ++ ++  +   ++++       A+      
Sbjct: 272 EAGATTPLWAGWLPGQEPRLLTLAEEGLYNRIELVNLSDDTRQQLDPLPPGGAAQAPLSV 331

Query: 355 SPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVE 388
           S  G  +A  +        +     DG + R L  
Sbjct: 332 SADGRTLACVRTHPAGPPEVWAGPIDG-ELRCLTH 365


>gi|85709083|ref|ZP_01040149.1| hypothetical protein NAP1_07570 [Erythrobacter sp. NAP1]
 gi|85690617|gb|EAQ30620.1| hypothetical protein NAP1_07570 [Erythrobacter sp. NAP1]
          Length = 661

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 75/196 (38%), Gaps = 8/196 (4%)

Query: 245 RIDRAPKRIGNF--RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           R    P  I  +       A   S +G+    S       +++ +        ++T    
Sbjct: 51  RAGEYPADIARYLLAGGPGAANLSPDGETIAFSWDITGQSELWVMPASGGVPRQVTFETG 110

Query: 303 INISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGD 359
           +     ++PD S + + +DR+G      +V+  +G  +  I       +     ++  G 
Sbjct: 111 VGA-PVWTPDGSALFYSADRDGNEQPGYFVLTPDGMSETEILPAARGDFRIFGGFAEDGS 169

Query: 360 LI-AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            I A T      F I     DG+ E L+  +  L A + SP+G+  I +    G+    L
Sbjct: 170 FIYASTARGAGVFDIYRGTMDGASELLVESELGLAARSISPNGKYAIVTETV-GEDADNL 228

Query: 419 YSIDLNGRNETLINTP 434
           Y +DL  +  T I+ P
Sbjct: 229 YLLDLATKEMTTISKP 244



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 76/210 (36%), Gaps = 18/210 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +A+ ++D      +++M       P+++  F + + AP ++ +G     S  +D
Sbjct: 74  SPDGETIAF-SWDITGQSELWVM-PASGGVPRQVT-FETGVGAPVWTPDGSALFYSADRD 130

Query: 280 EAMDI--YSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDRE-GKEQLYVMQSN 334
                  + +     +   +      +  I   ++ D S I   + R  G   +Y    +
Sbjct: 131 GNEQPGYFVLTPDGMSETEILPAARGDFRIFGGFAEDGSFIYASTARGAGVFDIYRGTMD 190

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVEDSNLQ 393
           G+ +  +  + E        SP G     T+  GE    + ++     +   + +     
Sbjct: 191 GASE--LLVESELGLAARSISPNGKYAIVTETVGEDADNLYLLDLATKEMTTISKPPVEN 248

Query: 394 APT-------WSPSGRSLIFSRKKDGDTGS 416
             +       W P+ R   FS     + G+
Sbjct: 249 RASHTLGGFEWWPNSRGFYFSTNLGREYGA 278



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 30/97 (30%), Gaps = 20/97 (20%)

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---------------WSPSGRSLIFS 407
           F    G   +I  M+ DGS   L       + P                 SP G ++ FS
Sbjct: 27  FGGAKGADLSIEAMEPDGSGVTL---GRAGEYPADIARYLLAGGPGAANLSPDGETIAFS 83

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               G   S+L+ +  +G     +        P W  
Sbjct: 84  WDITGQ--SELWVMPASGGVPRQVTFETGVGAPVWTP 118


>gi|88803532|ref|ZP_01119057.1| MdsD protein, putative [Polaribacter irgensii 23-P]
 gi|88780544|gb|EAR11724.1| MdsD protein, putative [Polaribacter irgensii 23-P]
          Length = 1060

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 94/244 (38%), Gaps = 35/244 (14%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           + ++  P  SP+  ++A++ + D     +++++   D+  KR+   +     P ++S   
Sbjct: 22  NTLIRMPSISPDASQMAFSYHGD-----IWVLNFATDQ-TKRLTIHQGYESDPIWNSKSN 75

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-----EGK 325
           +   +  +  +++I+  DL     ++LT     ++ + ++ + S I+F S+R     E +
Sbjct: 76  QLAFTSNRRGSVNIFKTDLNGGIPDQLTYHPSGDMPSHWNANGS-IIFSSNRIFKGTERE 134

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----------FSGEKFAIGV 375
             +Y +  NG    R      A       SP G+ +AF K              +  + +
Sbjct: 135 SSIYAIDENGETPNRFMT---ALGSQASISPNGNFVAFVKGTCRVSREDYNGPAQRDVWI 191

Query: 376 MKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL------NGRNE 428
                 +  ++     N   P W      L +   + G     +Y   L      NG N 
Sbjct: 192 YNLKSKEYHQITTSKKNDHTPLWDADNN-LYYVGSESGR--YNIYKTSLNSNGTENGSNS 248

Query: 429 TLIN 432
            L N
Sbjct: 249 QLTN 252



 Score = 96.2 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 71/199 (35%), Gaps = 21/199 (10%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           ++I  P  S +  +   S   D    I+ ++  ++ T+RLT          ++  S+Q+ 
Sbjct: 23  TLIRMPSISPDASQMAFSYHGD----IWVLNFATDQTKRLTIHQGYESDPIWNSKSNQLA 78

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----GEKFA 372
           F S+R G   ++    NG    +++           W+  G  I F+          + +
Sbjct: 79  FTSNRRGSVNIFKTDLNGGIPDQLTYHPSG-DMPSHWNANGS-IIFSSNRIFKGTERESS 136

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR--------KKDGDTGSKLYSIDLN 424
           I  + ++G         +     + SP+G  + F +          +G     ++  +L 
Sbjct: 137 IYAIDENGETPNR-FMTALGSQASISPNGNFVAFVKGTCRVSREDYNGPAQRDVWIYNLK 195

Query: 425 GRN-ETLINTPAYASDPQW 442
            +    +  +      P W
Sbjct: 196 SKEYHQITTSKKNDHTPLW 214



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 90/239 (37%), Gaps = 19/239 (7%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +FEP  SPN+ K++Y        L +  +      APK   N  +      +S + K   
Sbjct: 405 VFEPLLSPNRMKISY--RIGRGELVIADIKDSKIVAPKSYSNSWASANDVSWSPDSKYIA 462

Query: 274 ISVQK-DEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDREG-----KE 326
            S Q  D   +IY   ++ S+    ++     + S  +SPD  ++ F S+R G       
Sbjct: 463 YSQQDLDFDSEIYIQSVENSSNKINISMHPRSDASPVWSPDGKKLSFVSNRAGDRGGINY 522

Query: 327 QLYVMQSNGSDQKRISQD-KEASYFDPVW--SPQGDLIAFTKFSGEKFAIGVMKKD--GS 381
             +++    +D ++   D KE +Y+ P    S  G      K +  K  +  +  D    
Sbjct: 523 DAWMVWLQKADWEKTKADFKEGAYYQPKEEDSEDGK----EKKNSAKKVVVKIDADKIYD 578

Query: 382 QERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +   L   +  +  T +S   +S+  S        +  Y + + G     +   +Y   
Sbjct: 579 RLVQLTSWAGNEGGTLFSADSKSVYISATNPATAKNGYYKVKITGGTPKPVKGVSYVGS 637



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 74/218 (33%), Gaps = 23/218 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN + +A +   +  +       T+ +     + N       P +  +         
Sbjct: 314 SVSPNGKLIALSINGEIFVKENNKDKTKTNN----VSNHPFRDDNPFW-IDDSTLGFLSD 368

Query: 278 KDEAMDIYSVDLQSNAT----------ERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +    + + V+                 +LT +         SP+  +I   S R G+ +
Sbjct: 369 RSGQNEFFKVESTDKNVNLSRSLKTAVTQLTKSKTDVFEPLLSPNRMKI---SYRIGRGE 425

Query: 328 LYVMQSNGSD--QKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQER 384
           L +     S     +   +  AS  D  WSP    IA+++        I +   + S  +
Sbjct: 426 LVIADIKDSKIVAPKSYSNSWASANDVSWSPDSKYIAYSQQDLDFDSEIYIQSVENSSNK 485

Query: 385 LLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + +     +  +P WSP G+ L F   + GD G   Y 
Sbjct: 486 INISMHPRSDASPVWSPDGKKLSFVSNRAGDRGGINYD 523



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 87/283 (30%), Gaps = 40/283 (14%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSES----VVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            + D  + +T  +G  +  I     +      +     ++   D +G     LT      
Sbjct: 50  FATDQTKRLTIHQGYESDPIWNSKSNQLAFTSNRRGSVNIFKTDLNGGIPDQLTYHPSG- 108

Query: 214 LFEPRFSPNQQKVAYATYDDEDILR---VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
                ++ N   +  +    +   R   +Y +D   +   + +    S       S NG 
Sbjct: 109 DMPSHWNANGSIIFSSNRIFKGTERESSIYAIDENGETPNRFMTALGSQA---SISPNGN 165

Query: 271 RALIS----------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                                 D++  +L+S    ++T +   + +  +  D++ + +  
Sbjct: 166 FVAFVKGTCRVSREDYNGPAQRDVWIYNLKSKEYHQITTSKKNDHTPLWDADNN-LYYVG 224

Query: 321 DREGKEQLYVMQSNGSDQK-----RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              G+  +Y    N +  +     +++  K         S  G  I +     + F I  
Sbjct: 225 SESGRYNIYKTSLNSNGTENGSNSQLTNLKVNGVISFSVSANGT-IVYNS-GADVFKIQN 282

Query: 376 MKKDGSQERLLVE-----------DSNLQAPTWSPSGRSLIFS 407
              +    +L  +             ++   + SP+G+ +  S
Sbjct: 283 NIFEKLNLKLTTDNRFELEKANTVSGDIGNLSVSPNGKLIALS 325


>gi|119487504|ref|ZP_01621114.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
 gi|119455673|gb|EAW36809.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
          Length = 1218

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 47/240 (19%), Positives = 100/240 (41%), Gaps = 20/240 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S  +  ++ +   DG  ++ L    + +++   FSPN   +A A+ D  + ++++  D  
Sbjct: 742 SASLDKTVKLWKPDGTLVKTL-QGHENLVYGVAFSPNGDMIATASAD--NTVKLWEPD-- 796

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                K +      +    FS NG     S   D  + ++ +D      + L        
Sbjct: 797 -GTLVKTLSGHEYSVFGVAFSPNGDMIA-SASGDNTVKLWKLD--GTLVKTLQGHEDGVF 852

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++SP+   I   SD      + + + +G++   + +  E +     +SP GD+IA   
Sbjct: 853 GVAFSPNGDMIASASD---DNTVKLWKLDGTEVATL-EGHENTVIGVAFSPNGDMIASAS 908

Query: 366 FSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  + + K DG+  + L   ++ + A  +SP+G  +  +     D   KL+++DL+
Sbjct: 909 EDNT---VKLWKPDGTLVKTLEGHENGVYAVAFSPNGDMIASASD---DNTVKLWTVDLD 962



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 52/284 (18%), Positives = 105/284 (36%), Gaps = 24/284 (8%)

Query: 145 FSSPASWRKIAHTISDDIYQSIT---GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
            ++  +   + H + D   +  +    E G          + + SG   N++ +   DG 
Sbjct: 535 VNTEGTVMSVLHKVLDRPQEQNSINGHESGVIAVAFSPNGDMIASGSADNTVKLWKPDGT 594

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
            ++ L    D ++    FSPN + +A A++D+     V L            G+   +  
Sbjct: 595 LVQTLQGHEDSVIGV-AFSPNGEMIASASFDN----TVKLWKPEGILVKTLEGHEDGVN- 648

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              FS +G+    S   D+ + ++ +D      + L          ++SP    I     
Sbjct: 649 GVAFSRDGEMIA-SGSWDKTVKLWKLD--GTLVKTLQGHGGSVFDVAFSPKGDMIA---- 701

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G   + + + +G+  K +S   E       +S  GD+IA          + + K DG+
Sbjct: 702 TAGHMTVKLWEPDGTLVKTLS-GHENEVRGVAFSRDGDMIASASLDKT---VKLWKPDGT 757

Query: 382 QERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             + L   ++ +    +SP+G  +  +     D   KL+  D  
Sbjct: 758 LVKTLQGHENLVYGVAFSPNGDMIATAS---ADNTVKLWEPDGT 798



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 92/240 (38%), Gaps = 21/240 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   DG  ++ L       +F+  FSP    +A A +     + V L +  
Sbjct: 661 SGSWDKTVKLWKLDGTLVKTL-QGHGGSVFDVAFSPKGDMIATAGH-----MTVKLWEPD 714

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                K +    + +    FS +G     S   D+ + ++  D      + L     +  
Sbjct: 715 -GTLVKTLSGHENEVRGVAFSRDGDMIA-SASLDKTVKLWKPD--GTLVKTLQGHENLVY 770

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++SP+   I   S       + + + +G+  K +S   E S F   +SP GD+IA   
Sbjct: 771 GVAFSPNGDMIATAS---ADNTVKLWEPDGTLVKTLS-GHEYSVFGVAFSPNGDMIASAS 826

Query: 366 FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  + + K DG+  + L   +  +    +SP+G  +  +     D   KL+ +D  
Sbjct: 827 GDNT---VKLWKLDGTLVKTLQGHEDGVFGVAFSPNGDMIASASD---DNTVKLWKLDGT 880



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E G F        + + S    N++ +   DG  +  L    +  +    FSPN   +A
Sbjct: 847 HEDGVFGVAFSPNGDMIASASDDNTVKLWKLDGTEVATL-EGHENTVIGVAFSPNGDMIA 905

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            A+ D  + ++++  D       K +    + + A  FS NG     S   D  + +++V
Sbjct: 906 SASED--NTVKLWKPD---GTLVKTLEGHENGVYAVAFSPNGDMIA-SASDDNTVKLWTV 959

Query: 288 DLQ 290
           DL 
Sbjct: 960 DLD 962


>gi|332705704|ref|ZP_08425780.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332355496|gb|EGJ34960.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1458

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 64/377 (16%), Positives = 136/377 (36%), Gaps = 40/377 (10%)

Query: 78   VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE----GKDRLRVEFRLWDV 133
             F  +S     Q + +  S    + W+        TG VI+       D + V F     
Sbjct: 1055 FFRSVSFSRDGQTLASGGSDHIIKLWDPK------TGEVIRTLIGHNDDVMSVSFS---- 1104

Query: 134  KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
             D + +      ++   W         +I      +    +       +++ SG   N++
Sbjct: 1105 PDGQTLASGSDDNTIKLWNLETRR---EIRTLKGHDHVVHSVSFSRDGQTLASGSFDNTI 1161

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             + D     +       D  L    FS + Q +A  + D      + L D +  +  + +
Sbjct: 1162 KLWDPKTGEVIRTLVGHDDFLNSISFSRDGQTLASVSDDK----TIKLWDPKTGKVIRTL 1217

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPD 312
                  + +  FS +G+    S   D+ + ++  DL++    R L    +  +S S+SPD
Sbjct: 1218 IGHTEAVESVSFSPDGQTLA-SGSYDKTIKLW--DLETGREIRTLIGHTYTVLSVSFSPD 1274

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               +   S       + +       + R  +  ++      +SP G  +A    S E   
Sbjct: 1275 GQTLASGSY---DTTIKLWNLETGKKIRTLKMYDSVATSVSFSPDGQTLASASSSSEN-T 1330

Query: 373  IGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            I +      +    L+  D+++ + ++S  G++L        D   KL++++      TL
Sbjct: 1331 IKLWDPKTGEVIRTLIGHDNDVNSVSFSRDGQTLA---SGSSDETIKLWNLETGTEIVTL 1387

Query: 431  ------INTPAYASDPQ 441
                  +++ +++SD Q
Sbjct: 1388 QGHIDNVDSVSFSSDGQ 1404



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 86/254 (33%), Gaps = 19/254 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ S    +++ + + +     +     D       FS + Q +A           + L
Sbjct: 1024 QTLASESDDHTIKLWNLETGAEIHTLQGHDHFFRSVSFSRDGQTLA----SGGSDHIIKL 1079

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D +     + +      +++  FS +G+    S   D  + ++  +L++    R L   
Sbjct: 1080 WDPKTGEVIRTLIGHNDDVMSVSFSPDGQTLA-SGSDDNTIKLW--NLETRREIRTLKGH 1136

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              +  S S+S D   +   S       + +      +  R     +       +S  G  
Sbjct: 1137 DHVVHSVSFSRDGQTLASGSF---DNTIKLWDPKTGEVIRTLVGHDDFLNSISFSRDGQT 1193

Query: 361  IAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A          I +      +    L+     +++ ++SP G++L        D   KL
Sbjct: 1194 LASVSDDKT---IKLWDPKTGKVIRTLIGHTEAVESVSFSPDGQTLASGSY---DKTIKL 1247

Query: 419  YSIDLNGRNETLIN 432
            + ++      TLI 
Sbjct: 1248 WDLETGREIRTLIG 1261



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 91/266 (34%), Gaps = 19/266 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ SG   N++ + + +            + +    FS + Q +A  +YD+     + L
Sbjct: 856  QTLASGSDDNTIKLWNLETGEEIRTLIGHTETVHSVSFSRDGQTLASGSYDN----TIKL 911

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             D +  +  + +     ++ +  FS +G+    S   D  + ++  +L++  T R L   
Sbjct: 912  WDPKTGKVIRTLIGHTEVVRSVSFSRDGQTLA-SGSDDNTIKLW--NLETGKTIRTLIGH 968

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                +S S+S D   +   S       + +      +  R             +S  G  
Sbjct: 969  TETVMSVSFSRDGQTLASGST---DNTIKLWDPKTGEVIRTLIGHTGRVNSVSFSRDGQT 1025

Query: 361  IAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A      +   I +   +   E   L   D   ++ ++S  G++L        D   KL
Sbjct: 1026 LA---SESDDHTIKLWNLETGAEIHTLQGHDHFFRSVSFSRDGQTLA---SGGSDHIIKL 1079

Query: 419  YSIDLNGRNETLINTPAYASDPQWVG 444
            +         TLI          +  
Sbjct: 1080 WDPKTGEVIRTLIGHNDDVMSVSFSP 1105



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 85/253 (33%), Gaps = 20/253 (7%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                    + ++L  +  +G+  R      DQ +    FS + Q +A  + D+     + 
Sbjct: 814  KHKKSDPQVMSALQKVLYEGS-ERNHLQGNDQNVTSVSFSRDGQTLASGSDDN----TIK 868

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTN 299
            L +       + +      + +  FS +G+    S   D  + ++  D ++    R L  
Sbjct: 869  LWNLETGEEIRTLIGHTETVHSVSFSRDGQTLA-SGSYDNTIKLW--DPKTGKVIRTLIG 925

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               +  S S+S D   +   SD      + +         R       +     +S  G 
Sbjct: 926  HTEVVRSVSFSRDGQTLASGSD---DNTIKLWNLETGKTIRTLIGHTETVMSVSFSRDGQ 982

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             +A          I +      +    L+     + + ++S  G++L     +  D   K
Sbjct: 983  TLASGSTDNT---IKLWDPKTGEVIRTLIGHTGRVNSVSFSRDGQTLA---SESDDHTIK 1036

Query: 418  LYSIDLNGRNETL 430
            L++++      TL
Sbjct: 1037 LWNLETGAEIHTL 1049



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 97/293 (33%), Gaps = 41/293 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        +LWD K  K I              I HT   ++ +S++  +      
Sbjct: 898  QTLASGSYDNTIKLWDPKTGKVIRTL-----------IGHT---EVVRSVSFSRDG---- 939

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 +++ SG   N++ + + +            + +    FS + Q +A  + D+   
Sbjct: 940  -----QTLASGSDDNTIKLWNLETGKTIRTLIGHTETVMSVSFSRDGQTLASGSTDN--- 991

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              + L D +     + +      + +  FS +G+    S   D  + ++  +L++ A   
Sbjct: 992  -TIKLWDPKTGEVIRTLIGHTGRVNSVSFSRDGQTLA-SESDDHTIKLW--NLETGAEIH 1047

Query: 297  -LTNTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVW 354
             L        S S+S D   +       G + +  +      +  R             +
Sbjct: 1048 TLQGHDHFFRSVSFSRDGQTLA----SGGSDHIIKLWDPKTGEVIRTLIGHNDDVMSVSF 1103

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
            SP G  +A          I +   +  +E   ++  +    + ++S  G++L 
Sbjct: 1104 SPDGQTLASGSDDNT---IKLWNLETRREIRTLKGHDHVVHSVSFSRDGQTLA 1153



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 69/199 (34%), Gaps = 10/199 (5%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ SG    ++ + D +              +    FSP+ Q +A  +YD      + L
Sbjct: 1234 QTLASGSYDKTIKLWDLETGREIRTLIGHTYTVLSVSFSPDGQTLASGSYDT----TIKL 1289

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +    +  + +  + S+  +  FS +G+    +    E   I   D ++    R     
Sbjct: 1290 WNLETGKKIRTLKMYDSVATSVSFSPDGQTLASASSSSENT-IKLWDPKTGEVIRTLIGH 1348

Query: 302  FINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              ++ S S+S D   +   S     E + +       +    Q    +     +S  G  
Sbjct: 1349 DNDVNSVSFSRDGQTLASGSS---DETIKLWNLETGTEIVTLQGHIDNVDSVSFSSDGQT 1405

Query: 361  IAFTKFSGEKFAIGVMKKD 379
            +A +  S E   +  +  +
Sbjct: 1406 LA-SGSSDETIKLWNLDLN 1423



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 55/184 (29%), Gaps = 8/184 (4%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +      D  ++               +      + +  FS +G+    S   D  +
Sbjct: 809 GKILQKHKKSDPQVMSALQKVLYEGSERNHLQGNDQNVTSVSFSRDGQTLA-SGSDDNTI 867

Query: 283 DIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++  +L++    R L        S S+S D   +   S       + +         R 
Sbjct: 868 KLW--NLETGEEIRTLIGHTETVHSVSFSRDGQTLASGSY---DNTIKLWDPKTGKVIRT 922

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                       +S  G  +A +        +  ++   +   L+     + + ++S  G
Sbjct: 923 LIGHTEVVRSVSFSRDGQTLA-SGSDDNTIKLWNLETGKTIRTLIGHTETVMSVSFSRDG 981

Query: 402 RSLI 405
           ++L 
Sbjct: 982 QTLA 985



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 64/195 (32%), Gaps = 26/195 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQI---IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
                        +LWD++  ++I   IG  +     S+     T++   Y +        
Sbjct: 1234 QTLASGSYDKTIKLWDLETGREIRTLIGHTYTVLSVSFSPDGQTLASGSYDTTIKLWNLE 1293

Query: 174  NSRILFV------------------SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
              + +                    + +  S   +N++ + D     +       D  + 
Sbjct: 1294 TGKKIRTLKMYDSVATSVSFSPDGQTLASASSSSENTIKLWDPKTGEVIRTLIGHDNDVN 1353

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               FS + Q +A  + D+     + L +         +      + +  FSS+G+    S
Sbjct: 1354 SVSFSRDGQTLASGSSDE----TIKLWNLETGTEIVTLQGHIDNVDSVSFSSDGQTLA-S 1408

Query: 276  VQKDEAMDIYSVDLQ 290
               DE + ++++DL 
Sbjct: 1409 GSSDETIKLWNLDLN 1423


>gi|242041123|ref|XP_002467956.1| hypothetical protein SORBIDRAFT_01g037140 [Sorghum bicolor]
 gi|241921810|gb|EER94954.1| hypothetical protein SORBIDRAFT_01g037140 [Sorghum bicolor]
          Length = 724

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 117/329 (35%), Gaps = 70/329 (21%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIK------NSLCVMDRDGANIRYLTPSRDQILFE 216
            QS   + G F    +F + S     +        ++ + D  G  + + T   D I F 
Sbjct: 374 VQSPHEDVGVFRVSGVFPTFSKDGSKLAFVDNEFKAVWLADSHGLRVVFETDGPDSI-FS 432

Query: 217 PRFSPNQQKVAYA----TYDDEDILRVYLM-----DTRIDRAPKRIGNFRSMILAPRFSS 267
           P +   ++ + Y     ++   + L +Y +       R  R  +++   +     P  + 
Sbjct: 433 PVW-NQKKDILYVCMGPSFKANETLEIYAIPDVSRGARARRHTRQLTKGKFNNAFPFTNP 491

Query: 268 NGKRALISVQKDEAM----DIYSVD------LQSNATERLTNTLFINISASYSPDSSQIV 317
           +G + +    +D       ++Y ++      +      RLT   +I+    +SPD + +V
Sbjct: 492 DGTKFVFRSTRDGGDKNYKNLYIMEDAEFGEVGGGKVTRLTEGSWIDTHCQWSPDGNLVV 551

Query: 318 FESDRE--------------GKEQLYVMQSNGSDQKRISQDKE---ASYFDPVWSPQGDL 360
           F S+R+              G   +Y+M  +     R+ +           PV+SP G  
Sbjct: 552 FASNRDKPADAPERDHGLDPGYFAVYLMNVSDRSVVRVIRSGYDLSGHVNHPVFSPDGRS 611

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS----PSGRSLIFSRKKDGDTGS 416
           IA T        +  +  D            +  PT+     P G   IFS   D D   
Sbjct: 612 IAVTS------DLAAVSAD-----------PMSLPTFLHSVRPYGD--IFSVDIDPDDME 652

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVGF 445
           K  + DL+ +   + ++    S P W  F
Sbjct: 653 K--NKDLD-KFVRVTHSRYENSTPAWTVF 678



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 47/166 (28%), Gaps = 26/166 (15%)

Query: 220 SPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           S N   + Y +      +      V           + +    +  L+P  S +GK+  +
Sbjct: 142 STNDHYLVYVSTKEPVQERRSPWNVVYKTNLRTSETEHLTPPGTFDLSPSVSPSGKKIAV 201

Query: 275 SVQKDEAMDIYSVDLQSN-----------ATERLTNTLFINISASYSPDSSQIV--FESD 321
           +  + +  D    DL++N              R+          S+    S+ V  F   
Sbjct: 202 ASFQGKTWDGEIKDLKTNIYLTSLENPPLERRRVIENGGW---PSW---GSENVIFFHRK 255

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
                 ++    +  +  R++ +   +            +A     
Sbjct: 256 VGDIWGVFRYNLSTGETVRVTPEAFDAVTPAAI--DETRVAVATIR 299



 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 88/264 (33%), Gaps = 48/264 (18%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-------SMILAPRF 265
               P  SP+ +K+A A++         + D + +     + N              P +
Sbjct: 186 FDLSPSVSPSGKKIAVASF-QGKTWDGEIKDLKTNIYLTSLENPPLERRRVIENGGWPSW 244

Query: 266 SSNGKR--ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------ 317
              G         +  +   ++  +L +  T R+T   F  ++ + + D +++       
Sbjct: 245 ---GSENVIFFHRKVGDIWGVFRYNLSTGETVRVTPEAFDAVTPA-AIDETRVAVATIRQ 300

Query: 318 ---FESDREGKEQLYVMQSNGSDQK---RISQDKE--ASYFDPVWSPQG---------DL 360
              F   R   +  ++   + S Q+   +I+Q+    A +F+P     G         DL
Sbjct: 301 KSEFTDVRNEAQYRHIEIFDTSAQEQPLQITQNTRAKADHFNPFVMDGGNTYYHRCKSDL 360

Query: 361 IAFTKFSGEKFA-IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +         F  +    +D    R+     +   PT+S  G  L F   +       ++
Sbjct: 361 LKHGDDVPRHFHKVQSPHEDVGVFRV-----SGVFPTFSKDGSKLAFVDNE----FKAVW 411

Query: 420 SIDLNG-RNETLINTPAYASDPQW 442
             D +G R     + P     P W
Sbjct: 412 LADSHGLRVVFETDGPDSIFSPVW 435



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 60/182 (32%), Gaps = 31/182 (17%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSS----QIVFESD-------REGKEQLYV 330
            DIY  DL S A  RL +   I     Y  D S     +V+ S        R     +Y 
Sbjct: 114 ADIYGSDLFSGA--RLEDNGCIAGG--YEVDGSTNDHYLVYVSTKEPVQERRSPWNVVYK 169

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--------- 381
                S+ + ++         P  SP G  IA   F G+ +   +     +         
Sbjct: 170 TNLRTSETEHLTPPG-TFDLSPSVSPSGKKIAVASFQGKTWDGEIKDLKTNIYLTSLENP 228

Query: 382 --QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
             + R ++E+     P+W  S   + F RK     G   Y++   G    +      A  
Sbjct: 229 PLERRRVIENGGW--PSWG-SENVIFFHRKVGDIWGVFRYNLS-TGETVRVTPEAFDAVT 284

Query: 440 PQ 441
           P 
Sbjct: 285 PA 286


>gi|116754145|ref|YP_843263.1| periplasmic component of the Tol biopolymer transport system-like
           [Methanosaeta thermophila PT]
 gi|116665596|gb|ABK14623.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Methanosaeta thermophila PT]
          Length = 1202

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 89/228 (39%), Gaps = 17/228 (7%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
              P    +  +V +         +VY+M+        RI N      +P  S  G   +
Sbjct: 327 HTNPSIFND--RVVWTDDRTGH-YQVYMMNLTTGEEI-RITNDDIDHSSPDIS--GDYVI 380

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +  ++  +D++  DL++    +L+   F         D   +V+  +R G +Q+YV   
Sbjct: 381 YTDMRNGNLDVFLYDLRAGNERQLSKDPFDQRYPMI--DGRYVVWMDNRTGSDQIYVYDV 438

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNL 392
               +++I+  ++A    PV S  GD I +      K+ I +      +E  +    +N 
Sbjct: 439 LQGSERQITTQQQAQLLSPVIS--GDRIVWADRRSGKWDIYMYNLTTGKETPICTNPANQ 496

Query: 393 QAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLINTPAY 436
             P     G +++++  ++          +YS +L    ET I T  Y
Sbjct: 497 VQPWIH--GNTIVWADGRNALNASIRNWDIYSYNLTTGKETPICTNGY 542



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 62/420 (14%), Positives = 135/420 (32%), Gaps = 63/420 (15%)

Query: 67  EVVSKDLQRSDVFN--LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR--VIKEGKD 122
            +V  D +RS  ++  + +  + K+     +   + Q W        + G   V  +G++
Sbjct: 463 RIVWAD-RRSGKWDIYMYNLTTGKETPICTNPANQVQPW--------IHGNTIVWADGRN 513

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            L    R WD+       GK+       + + A  +       +    G  +  +  + +
Sbjct: 514 ALNASIRNWDIYSYNLTTGKETPICTNGYNQGAPCVYGSYVAWLDERGGAADIYLYDLEK 573

Query: 183 SVVSGIIKNSLCVMDRDG----ANIRYLTPSRDQILFEPRFSPNQQ-------------- 224
            +   +    +     DG      ++ +  SR        +  +                
Sbjct: 574 GIEVPVSTLPMYQTPSDGKGDPYRVKPIASSRILSDKYIVWMDDSSGRPQIRARSPLWEP 633

Query: 225 -------------KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
                         +   + +      +Y  D    R+   I       L PR S  G+ 
Sbjct: 634 LLWLSTDFPSTNGSLMVWSDNRRGDWDIYGFD-FFTRSEIPIVRAEGDQLYPRAS--GQN 690

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            + S  +  + D+Y ++L +     +       + A  S D  +IV+  +  G   + + 
Sbjct: 691 VVWSDYRSGSSDVYMINLTTGEVTDVATGPGDQVWADISED--RIVWMDNSSGNWDVVLY 748

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             +    + +   K+ +   P  S  G LIA+       + I V       E  L  D +
Sbjct: 749 NISDGSTESL--RKQGNQMYPKIS--GSLIAWQDDRSGNWDIYVYDLKTGNETKLTGDGD 804

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ----WVGFMD 447
              P  S  G ++++  +  GD    +Y    + +       P   + P     ++ ++D
Sbjct: 805 QVFPDVS--GNTIVWEDRATGDIAYYIY----DKKWSKRYPRPGMQTSPAVSGKYIAYVD 858



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 53/282 (18%), Positives = 99/282 (35%), Gaps = 24/282 (8%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            +Y     E+ D +  I+ V     SG     +  ++               I   P  S
Sbjct: 29  AVYTGSEQEQPDIDGHIV-VWADGRSGNFDIFMYDLEI---GAERWVCIDPFIQINPAVS 84

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
               ++ +      +   +YL D + +R  + +         P    +G   + S  +D 
Sbjct: 85  --GYRIVWQDMRSGNA-DIYLYDVK-NRVEQIVCGDNGNQTDPDI--DGDVVVWSDDRDG 138

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             +IY  D+ +N  +R+T+     I+   S    ++V+  DR G   +Y+    G  +K 
Sbjct: 139 DWNIYLKDISTNQQKRVTSAQNDQITPKVSE--GRVVWADDRSGNFDIYMYDLKGGSEKA 196

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSP 399
           I          P     G++IA+      +  +        +E +L       AP+ W  
Sbjct: 197 ICTAS-GDQTLPAI--DGEIIAWADNRSGEMDVAFYDLSSGKETVLARPGIQTAPSVWRR 253

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +         ++  T   LY++D  G   TLI  P    +P 
Sbjct: 254 N------ITWQNNGTEIVLYNVD-TGEERTLIRGP-IVMEPA 287



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 101/279 (36%), Gaps = 24/279 (8%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           ++I    GD     +       +      + V   D ++ +    +R  I   P     +
Sbjct: 195 KAICTASGDQTLPAIDGEIIAWADNRSGEMDVAFYDLSSGKETVLARPGIQTAPSVW--R 252

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-- 281
           + + +      +   + L +         I     +++ P     G+R ++     +   
Sbjct: 253 RNITW----QNNGTEIVLYNVDTGEERTLIRGP--IVMEPAI---GERGVVWTDYRQGLQ 303

Query: 282 -MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             DIY  D        +T  +F + + S   D  ++V+  DR G  Q+Y+M     ++ R
Sbjct: 304 DPDIYMWDRMILPDLPVTQGIFNHTNPSIFND--RVVWTDDRTGHYQVYMMNLTTGEEIR 361

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSP 399
           I+ D +  +  P  S  GD + +T        + +       ER L +D   Q  P    
Sbjct: 362 ITND-DIDHSSPDIS--GDYVIYTDMRNGNLDVFLYDLRAGNERQLSKDPFDQRYPMI-- 416

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            GR +++   + G    ++Y  D+   +E  I T   A 
Sbjct: 417 DGRYVVWMDNRTGS--DQIYVYDVLQGSERQITTQQQAQ 453



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 55/153 (35%), Gaps = 10/153 (6%)

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            G  A+    KD   ++Y    +      +T      I+ +   D   +V++ +R G   +
Sbjct: 1055 GDIAVYQDNKDGNWNVYI--WKGQQKNPVTLDPADQINPA--TDGYIVVYQDNRNGNWDI 1110

Query: 329  YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-V 387
            Y   +N S + RI+ D        + S    +I +       + I        +E  + +
Sbjct: 1111 YAFDTNNSKEIRITSDTTDQTNPDIES---GVIVWQDRRNGDWDIYAFDLSTGKEIPICI 1167

Query: 388  EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               +   P      R ++++  + GD    +Y 
Sbjct: 1168 APGDQTEPRIG--SRKIVWTDNRSGDKDIYIYD 1198



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 50/152 (32%), Gaps = 10/152 (6%)

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +A    + +    VY+      +    +    +  + P   ++G   +    ++   DIY
Sbjct: 1057 IAVYQDNKDGNWNVYIWK---GQQKNPVTLDPADQINPA--TDGYIVVYQDNRNGNWDIY 1111

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            + D  ++   R+T+      +     +S  IV++  R G   +Y    +   +  I    
Sbjct: 1112 AFDTNNSKEIRITSDTTDQTNPDI--ESGVIVWQDRRNGDWDIYAFDLSTGKEIPI-CIA 1168

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                 +P        I +T        I +  
Sbjct: 1169 PGDQTEPRI--GSRKIVWTDNRSGDKDIYIYD 1198



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 78/243 (32%), Gaps = 19/243 (7%)

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
            N+             P        +A+   + +           I     ++        
Sbjct: 950  NVEIPLAGGPLYDMYPDI--RGTVIAWVGQNPQHDNWAVRTFDVITANRSQLTGAEFFTP 1007

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            +P   S G + L+      A       L    TE +        +   +      V++ +
Sbjct: 1008 SPI--SIGDKYLVWQDLSFAGWRLYKKLVYGGTEPVEAIPPSGTNPRTA--GDIAVYQDN 1063

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            ++G   +Y+ +     QK       A   +P     G ++ +       + I     + S
Sbjct: 1064 KDGNWNVYIWK---GQQKNPVTLDPADQINPAT--DGYIVVYQDNRNGNWDIYAFDTNNS 1118

Query: 382  QERLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTPAYAS 438
            +E  +  D+  Q    +P      +++  +++GD    +Y+ DL+   E  I   P   +
Sbjct: 1119 KEIRITSDTTDQT---NPDIESGVIVWQDRRNGDW--DIYAFDLSTGKEIPICIAPGDQT 1173

Query: 439  DPQ 441
            +P+
Sbjct: 1174 EPR 1176


>gi|285808387|gb|ADC35915.1| peptidase S9 prolyl oligopeptidase [uncultured bacterium 59]
          Length = 685

 Score = 97.8 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 85/270 (31%), Gaps = 45/270 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDT----RIDRAPKRIGNFRSMILAP------RFSS 267
           + SP+ ++VAY           +             P RIG    ++  P      R+S 
Sbjct: 52  KISPDGERVAYVVSTPSLPRNEHDAALFVVRASGGTPLRIGETLRILNTPLPAPRLRWSP 111

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESD----- 321
           +G    +     E   ++ V     A   LT          +SPD   + +   D     
Sbjct: 112 DGATISVLAFAGERPQVFGVPAAGGAPRALTTAPEGVSGFEWSPDGGTLAYLTRDPMSAE 171

Query: 322 --REGKEQLYVMQSN-------------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             R+ +++ +V+  +             G    R+            WSP G  IA+   
Sbjct: 172 EARQRQDKSFVIHVDAPDRPTRIGVQPIGGGAPRLLTPPAQYVESFTWSPDGREIAYAAA 231

Query: 367 SGEKF------AIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDT---GS 416
               F       +  +   G   R +V+   + + P +SP G  + F       +     
Sbjct: 232 PVTGFMAQYSTRLYAVSAAGGAPRTIVDRPGMNSFPQYSPDGTLIAFVSSNSKVSIMAPR 291

Query: 417 KLYSIDLNGRNETLIN----TPAYASDPQW 442
            L  +   G   TLI       A+ SD  W
Sbjct: 292 GLNVVPAGGGGATLIRAFGLGDAWVSDLTW 321



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 53/288 (18%), Positives = 95/288 (32%), Gaps = 45/288 (15%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-------EDILRVYLM 242
           +  +  +   G   R LT + + +     +SP+   +AY T D        +   + +++
Sbjct: 125 RPQVFGVPAAGGAPRALTTAPEGVSGF-EWSPDGGTLAYLTRDPMSAEEARQRQDKSFVI 183

Query: 243 DTRIDRAPKRIGNFRSMILAPR-------------FSSNGKRALISVQ------KDEAMD 283
                  P RIG       APR             +S +G+    +           +  
Sbjct: 184 HVDAPDRPTRIGVQPIGGGAPRLLTPPAQYVESFTWSPDGREIAYAAAPVTGFMAQYSTR 243

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKEQLYVMQSNGSDQ 338
           +Y+V     A   + +   +N    YSPD + I F S            L V+ + G   
Sbjct: 244 LYAVSAAGGAPRTIVDRPGMNSFPQYSPDGTLIAFVSSNSKVSIMAPRGLNVVPAGGGGA 303

Query: 339 KRIS--QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP- 395
             I      +A   D  W+     + +   S   +  GV   D    R+ V++   +A  
Sbjct: 304 TLIRAFGLGDAWVSDLTWARDSTSV-YLLASDGTYGSGVHMFDQPIVRVWVDNGRTEAVV 362

Query: 396 ---------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                    + S +G  L +   +    G        NGR+ TL +  
Sbjct: 363 AGRTANYSLSLSRNGVRLAYRSVEARTMGDVSVLDTTNGRHVTLTDVN 410



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 68/227 (29%), Gaps = 25/227 (11%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +      + V    G   R LTP    +     +SP+ +++AYA       +  Y   
Sbjct: 185 VDAPDRPTRIGVQPIGGGAPRLLTPPAQYVESF-TWSPDGREIAYAAAPVTGFMAQYSTR 243

Query: 244 T----RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-----MDIYSVDLQSNAT 294
                    AP+ I +   M   P++S +G          +        +  V       
Sbjct: 244 LYAVSAAGGAPRTIVDRPGMNSFPQYSPDGTLIAFVSSNSKVSIMAPRGLNVVPAGGGGA 303

Query: 295 ERLTN---TLFINISASYSPDSSQIVFESDREGKEQ---------LYVMQSNGSDQKRIS 342
             +             +++ DS+  V+    +G            +  +  +    + + 
Sbjct: 304 TLIRAFGLGDAWVSDLTWARDSTS-VYLLASDGTYGSGVHMFDQPIVRVWVDNGRTEAVV 362

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVE 388
             + A+Y     S  G  +A+          + V+     +   L +
Sbjct: 363 AGRTANYSL-SLSRNGVRLAYRSVEARTMGDVSVLDTTNGRHVTLTD 408


>gi|145544112|ref|XP_001457741.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124425559|emb|CAK90344.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1057

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 55/309 (17%), Positives = 106/309 (34%), Gaps = 44/309 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLW+VK  +Q    +            H  S D+Y       G     
Sbjct: 692 TTLASGSSDNSIRLWNVKTGEQKAKLE-----------GH--SSDVYSVNFSPDG----- 733

Query: 177 ILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                  + SG   NS+ + D   G  I  +    + I+    FSP+  K+   + D   
Sbjct: 734 -----TMLASGSADNSIRLWDAKTGQQIAKIYGHSNGIISV-NFSPDSNKITSGSVDK-- 785

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              V L D +  +   ++    S++ +  FS +G     S  +D ++  +  D+Q+   +
Sbjct: 786 --SVRLWDVKTGQQYVKLDGHLSIVTSVNFSPDGTTLA-SGSRDSSIRFW--DVQTGQQK 840

Query: 296 -RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +L        S ++SPD + +   S       +         QK          +   +
Sbjct: 841 AKLDGHSGYIYSVNFSPDGTTLASGSV---DNSIRFWDVQTGQQKAKLDGHTGYVYSVNF 897

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDG 412
           SP G  +A     G   +I +      Q+    +  +   ++  +SP   +L  + +   
Sbjct: 898 SPDGTTLA---SGGSDNSIRLWDVKTRQQIAKFDGHSHYVKSVCFSPDSTTLASASR--- 951

Query: 413 DTGSKLYSI 421
           D   +L+ +
Sbjct: 952 DNSIRLWDV 960



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 84/270 (31%), Gaps = 39/270 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                    +  RLWDVK  +QI                   S  +        G     
Sbjct: 408 TTLASGSDDISIRLWDVKTGQQIAK-------------IDGHSHYVMSVNFSPDG----- 449

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG   NS+ + +     ++         ++   FSP+   +A  + D    
Sbjct: 450 -----TTLASGSEDNSIRLWNVKTGQLKAKLDGHSSTVYSVNFSPDGTTLASGSRDK--- 501

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D +  +   ++    + + +  FS +G     S   D ++ ++  D+++     
Sbjct: 502 -SIRLWDVKTGQQKDKLDGHLNWVYSVIFSPDGTTLA-SGSVDNSIRLW--DVKTGQQRD 557

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVW 354
           +L        S  +S D + +       G++  + +       Q+          +   +
Sbjct: 558 KLDGHSNWVYSVIFSLDGTTLA----SGGRDNSICLWDVKTGQQRAKLDGHLGYVYSINF 613

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           SP G  +A          I +      Q +
Sbjct: 614 SPDGTTLASGSVDSS---IRLWDVKTGQLK 640



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/320 (15%), Positives = 96/320 (30%), Gaps = 63/320 (19%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                  +    RLWDVK  +Q             R      S+ +Y  I    G     
Sbjct: 534 TTLASGSVDNSIRLWDVKTGQQ-------------RDKLDGHSNWVYSVIFSLDG----- 575

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG   NS+C+ D      R         ++   FSP+   +A  + D    
Sbjct: 576 -----TTLASGGRDNSICLWDVKTGQQRAKLDGHLGYVYSINFSPDGTTLASGSVDSSIR 630

Query: 237 L----------------------------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           L                             + L D +  +   ++    S +    FS +
Sbjct: 631 LWDVKTGQLKDQSISLLMVRYQHLGSVDNSIRLWDGQTGQQNSKLYGHLSCVNQICFSPD 690

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           G     S   D ++ ++  ++++   + +L        S ++SPD + +   S       
Sbjct: 691 GTTLA-SGSSDNSIRLW--NVKTGEQKAKLEGHSSDVYSVNFSPDGTMLASGS---ADNS 744

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +  +    Q               +SP  + I           + +      Q+ + +
Sbjct: 745 IRLWDAKTGQQIAKIYGHSNGIISVNFSPDSNKITSGSVDKS---VRLWDVKTGQQYVKL 801

Query: 388 EDSNLQAPT--WSPSGRSLI 405
           +       +  +SP G +L 
Sbjct: 802 DGHLSIVTSVNFSPDGTTLA 821



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 80/226 (35%), Gaps = 21/226 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+   +A  + D    + + L D +  +   +I      +++  FS
Sbjct: 391 LNGHSGTINTLCFSPDGTTLASGSDD----ISIRLWDVKTGQQIAKIDGHSHYVMSVNFS 446

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGK 325
            +G     S  +D ++ ++  ++++   + +L        S ++SPD + +   S     
Sbjct: 447 PDGTTLA-SGSEDNSIRLW--NVKTGQLKAKLDGHSSTVYSVNFSPDGTTLASGSR---D 500

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + +       QK          +  ++SP G  +A          I +      Q+R 
Sbjct: 501 KSIRLWDVKTGQQKDKLDGHLNWVYSVIFSPDGTTLASGSVDNS---IRLWDVKTGQQRD 557

Query: 386 LVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            ++  +    +  +S  G +L       G   + +   D+    + 
Sbjct: 558 KLDGHSNWVYSVIFSLDGTTLA-----SGGRDNSICLWDVKTGQQR 598



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 82/275 (29%), Gaps = 37/275 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWD K  +QI  K +           H  S+ I              
Sbjct: 734 TMLASGSADNSIRLWDAKTGQQI-AKIY----------GH--SNGIISVNFSPD------ 774

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               S  + SG +  S+ + D               I+    FSP+   +A  + D    
Sbjct: 775 ----SNKITSGSVDKSVRLWDVKTGQQYVKLDGHLSIVTSVNFSPDGTTLASGSRDS--- 827

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             +   D +  +   ++      I +  FS +G     S   D ++  +  D+Q+   + 
Sbjct: 828 -SIRFWDVQTGQQKAKLDGHSGYIYSVNFSPDGTTLA-SGSVDNSIRFW--DVQTGQQKA 883

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L        S ++SPD + +           + +       Q               +S
Sbjct: 884 KLDGHTGYVYSVNFSPDGTTLA---SGGSDNSIRLWDVKTRQQIAKFDGHSHYVKSVCFS 940

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           P    +A          I +     ++E LL ++ 
Sbjct: 941 PDSTTLASASRDNS---IRLWDVKTAKEILLQDNF 972


>gi|332877940|ref|ZP_08445678.1| WD40-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684235|gb|EGJ57094.1| WD40-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 328

 Score = 97.8 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 89/258 (34%), Gaps = 55/258 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S +  ++AY ++ + +   +++ D     +  +  N R+ +L   +S +GK+ + S  +
Sbjct: 73  ISTDGSQIAYLSFRN-NTTNIFIKDLSKQGSSIQKTN-RTAVLDFSYSPDGKQIVFSEAR 130

Query: 279 DEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFES----------------- 320
            +   I+           ++T+   ++ S  YS D   I F                   
Sbjct: 131 GKTNQIFQTSADKGFVCRQITSGN-MDYSPIYSADMKLIFFARQENKSISIWSHDMQNNF 189

Query: 321 ------------------------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                                   +  G  +++ +      ++ I    +  +  P  SP
Sbjct: 190 LANYSQGLNPYPVKGEPAFICVRPNAAGHSEIWKVNYETGVEECIVSQPDRDFTSPSISP 249

Query: 357 QGDLIAFT--------KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFS 407
            G  + F          FS     + V + DG+    L    ++  +P WS  GR + F 
Sbjct: 250 DGQWLLFVGSSKIETGSFSYYNTDLFVSRLDGTGFAQLTYHAADDLSPVWSKDGRYIYFV 309

Query: 408 RKKDG-DTGSKLYSIDLN 424
            ++   +  + ++ +  N
Sbjct: 310 SQRGNKEAKANIWRMTFN 327


>gi|300770736|ref|ZP_07080615.1| peptidase S41 [Sphingobacterium spiritivorum ATCC 33861]
 gi|300763212|gb|EFK60029.1| peptidase S41 [Sphingobacterium spiritivorum ATCC 33861]
          Length = 1087

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 26/199 (13%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDRE 323
            S  G+RA+   +     +I++V  +      ++++        ++SP+   I + SD  
Sbjct: 319 VSPTGQRAIFEARG----EIFTVPKEKGDARNISSSPGSHERFPNWSPNGKWISYLSDAR 374

Query: 324 GKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           GK +L +      +D   IS      YFDP+WSP    + F   +     +  +  D  +
Sbjct: 375 GKYELVLRDQMAKNDPIYISLGDYYFYFDPIWSPDSKKLFF---NDAHLNLYYVDIDTKK 431

Query: 383 ERLLVED---------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN- 432
              + +D          N   P+WSP  + + + +    +T S ++  +L+ +    I  
Sbjct: 432 VTKVDDDVLGSHTNRTGNYFEPSWSPDSKWISYIKTLP-NTVSAVFMYNLDTKQSQQITD 490

Query: 433 ------TPAYASDPQWVGF 445
                  P ++ D +++ F
Sbjct: 491 GMSETHQPTFSRDGKYLFF 509



 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 86/245 (35%), Gaps = 20/245 (8%)

Query: 141 GKKFFSSPASWRKIAHT----ISDDIYQSITGEKGDFNSRILFVSESVVSGII--KNSLC 194
           GK +  +  S +K AH      +D+ Y+           R   VS +    I   +  + 
Sbjct: 277 GKIYTFNIKS-KKTAHIPVQIFADNFYKRPHYSNISEGIRNWNVSPTGQRAIFEARGEIF 335

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + ++  + R ++ S       P +SPN + ++Y +        V       +       
Sbjct: 336 TVPKEKGDARNISSSPGSHERFPNWSPNGKWISYLSDARGKYELVLRDQMAKNDPIYISL 395

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--------TNTLFINIS 306
                   P +S + K+       D  +++Y VD+ +    ++        TN       
Sbjct: 396 GDYYFYFDPIWSPDSKKLFF---NDAHLNLYYVDIDTKKVTKVDDDVLGSHTNRTGNYFE 452

Query: 307 ASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S+SPDS  I +          +++   +    ++I+ D  +    P +S  G  + FT 
Sbjct: 453 PSWSPDSKWISYIKTLPNTVSAVFMYNLDTKQSQQIT-DGMSETHQPTFSRDGKYLFFTA 511

Query: 366 FSGEK 370
            +   
Sbjct: 512 STNTG 516



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 81/218 (37%), Gaps = 32/218 (14%)

Query: 229 ATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +     I  VY  D  I       PKR+     +   P FS +GK+   +   D  +D+
Sbjct: 35  PSISQNHISFVYGGDIWIAGRDGSNPKRLTVNPDVERNPMFSPDGKQIAFTGNYDGNVDV 94

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKR 340
           Y++ +     +R+T     ++   +  ++ ++ F S +        +LY +  N    + 
Sbjct: 95  YTISVAGGEPKRITYHPAADVMRGWI-NNQELYFTSTQEFQYSLGSRLYKININKGKDEA 153

Query: 341 ISQDKEASYFDPVWSPQGDL--------------IAFTKFSGEKF-AIGVMKKDGSQERL 385
           +      + F+   SP G+               +AF ++ G    +I +     +   +
Sbjct: 154 L---PMPTAFEGSPSPDGNYWAYLKNSDPTEREVVAFKRYRGGGMPSIWIFNNKTNDIEI 210

Query: 386 LV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +  E SN   P W   G  + F   +  D    ++S D
Sbjct: 211 VPGEKSNNVKPIWL--GDKIYFLSDR--DKIVNIFSYD 244



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 78/213 (36%), Gaps = 20/213 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP  Q+  +     E    ++ +      A     +  S    P +S NGK         
Sbjct: 320 SPTGQRAIF-----EARGEIFTVPKEKGDARNISSSPGSHERFPNWSPNGKWISYLSDAR 374

Query: 280 EAMDIYSVD-LQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              ++   D +  N    ++   +       +SPDS ++ F    +    LY +  +   
Sbjct: 375 GKYELVLRDQMAKNDPIYISLGDYYFYFDPIWSPDSKKLFFN---DAHLNLYYVDIDTKK 431

Query: 338 QKRI-------SQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVED 389
             ++         ++  +YF+P WSP    I++ K       A+ +   D  Q + + + 
Sbjct: 432 VTKVDDDVLGSHTNRTGNYFEPSWSPDSKWISYIKTLPNTVSAVFMYNLDTKQSQQITDG 491

Query: 390 -SNLQAPTWSPSGRSLIFS-RKKDGDTGSKLYS 420
            S    PT+S  G+ L F+     G T S L+ 
Sbjct: 492 MSETHQPTFSRDGKYLFFTASTNTGLTNSGLHM 524



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 86/217 (39%), Gaps = 28/217 (12%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +S++ +S +    + +  RDG+N + LT + D +   P FSP+ +++A+    D + + V
Sbjct: 37  ISQNHISFVYGGDIWIAGRDGSNPKRLTVNPD-VERNPMFSPDGKQIAFTGNYDGN-VDV 94

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----AMDIYSVDLQSNATE 295
           Y +       PKRI    +  +   +  N +    +  ++        +Y +++     E
Sbjct: 95  YTISV-AGGEPKRITYHPAADVMRGW-INNQELYFTSTQEFQYSLGSRLYKININKGKDE 152

Query: 296 RLTNTLFINISASYSPDSSQ--------------IVFESDREGK-EQLYVMQSNGSDQKR 340
            L        S   SPD +               + F+  R G    +++  +  +D + 
Sbjct: 153 ALPMPTAFEGSP--SPDGNYWAYLKNSDPTEREVVAFKRYRGGGMPSIWIFNNKTNDIE- 209

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           I   ++++   P+W   GD I F     +   I    
Sbjct: 210 IVPGEKSNNVKPIWL--GDKIYFLSDRDKIVNIFSYD 244



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 57/149 (38%), Gaps = 21/149 (14%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + SP   + +FE+    + +++ +     D + IS    +    P WSP G  I++   +
Sbjct: 318 NVSPTGQRAIFEA----RGEIFTVPKEKGDARNISSSPGSHERFPNWSPNGKWISYLSDA 373

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             K+ + +  +    + + +   +      P WSP  + L F      D    LY +D++
Sbjct: 374 RGKYELVLRDQMAKNDPIYISLGDYYFYFDPIWSPDSKKLFF-----NDAHLNLYYVDID 428

Query: 425 GRNETLINTP---------AYASDPQWVG 444
            +  T ++               +P W  
Sbjct: 429 TKKVTKVDDDVLGSHTNRTGNYFEPSWSP 457


>gi|262195910|ref|YP_003267119.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haliangium ochraceum DSM 14365]
 gi|262079257|gb|ACY15226.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haliangium ochraceum DSM 14365]
          Length = 720

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 84/249 (33%), Gaps = 65/249 (26%)

Query: 260 ILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           + +P  S +GK    ++++ +       +DI+ V L     +R T       S +++PD 
Sbjct: 79  VGSPALSPDGKTIAYALRQTDLRANGARVDIWMVALDDGMPQRFTTLPGGESSPTWAPDG 138

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------- 365
           S + F S   G  Q++     G +  +++ +          SP G  +A +         
Sbjct: 139 SALYFLSGHSGSSQVWKQAIAGGEATQVT-ELPLDVSSFQISPTGTHLAVSMEVFVDCDT 197

Query: 366 --------------------------------FSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                                             G +  +  +  DG +   +    +  
Sbjct: 198 LSCTTDRMNTRSQAATTGVVYESLFVRHWDTWKDGRRSHLFTLPIDGGEPVDVTAGLDAD 257

Query: 394 APT----------WSPSGRSLIFSRKKDGD-----TGSKLYSIDLNGRNETLINT---PA 435
            P+          + PSG +L+F+ +  G+     T   LY++ ++G       T    A
Sbjct: 258 VPSKPFGGGEDYTFHPSGDTLVFAARDAGNEEPWSTNFDLYAVPVDGSERPRALTADNAA 317

Query: 436 YASDPQWVG 444
           + + P +  
Sbjct: 318 WDAHPVFSP 326



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 75/267 (28%), Gaps = 62/267 (23%)

Query: 217 PRFSPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           P  SP+ + +AY                 M    D  P+R         +P ++ +G   
Sbjct: 82  PALSPDGKTIAYALRQTDLRANGARVDIWMVALDDGMPQRFTTLPGGESSPTWAPDGSAL 141

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-------------FE 319
                   +  ++   +      ++T       S   SP  + +                
Sbjct: 142 YFLSGHSGSSQVWKQAIAGGEATQVTELPLDVSSFQISPTGTHLAVSMEVFVDCDTLSCT 201

Query: 320 SDR---------------------------EGKEQLYVMQSNGSDQKRISQDKEASY--- 349
           +DR                             +  L+ +  +G +   ++   +A     
Sbjct: 202 TDRMNTRSQAATTGVVYESLFVRHWDTWKDGRRSHLFTLPIDGGEPVDVTAGLDADVPSK 261

Query: 350 -----FDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKDGSQ-ERLLVEDSNLQ--A 394
                 D  + P GD + F              F +  +  DGS+  R L  D+      
Sbjct: 262 PFGGGEDYTFHPSGDTLVFAARDAGNEEPWSTNFDLYAVPVDGSERPRALTADNAAWDAH 321

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           P +SP G  L++   K     +  + +
Sbjct: 322 PVFSPDGALLVYLAMKRPGFEADRFRV 348



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 68/197 (34%), Gaps = 10/197 (5%)

Query: 188 IIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLM 242
                L  +  DG    R LT         P FSP+   + Y          D  RV   
Sbjct: 292 STNFDLYAVPVDGSERPRALTADNAAWDAHPVFSPDGALLVYLAMKRPGFEADRFRVIAR 351

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +     +     ++   I    F+ +  + L++        ++SVDL S  ++RL    +
Sbjct: 352 EWPGGESRVLTESWDRSISDLGFTRDASKLLVTTWDLGRKSLFSVDLPSGQSQRLVEGGY 411

Query: 303 INISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           ++         ++I F  D      +L+    +GSD + ++   +A         + + I
Sbjct: 412 VSAP---MDTGARIAFLRDDLRSPAELWTAAPDGSDARPLTHHNDAKLALAQMG-ETEQI 467

Query: 362 AFTKFSGEKFAIGVMKK 378
            F    G      V+K 
Sbjct: 468 TFRGAGGRNVYAWVVKP 484



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 83/243 (34%), Gaps = 26/243 (10%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD-QILFEP-------RFSPN 222
           G     +            ++ L  +  DG     +T   D  +  +P        F P+
Sbjct: 215 GVVYESLFVRHWDTWKDGRRSHLFTLPIDGGEPVDVTAGLDADVPSKPFGGGEDYTFHPS 274

Query: 223 QQKVAYATYDDEDI------LRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALI- 274
              + +A  D  +         +Y +       P+ +  +  +    P FS +G   +  
Sbjct: 275 GDTLVFAARDAGNEEPWSTNFDLYAVPVDGSERPRALTADNAAWDAHPVFSPDGALLVYL 334

Query: 275 SVQKDE----AMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLY 329
           ++++         + + +     +  LT +   +IS   ++ D+S+++  +   G++ L+
Sbjct: 335 AMKRPGFEADRFRVIAREWPGGESRVLTESWDRSISDLGFTRDASKLLVTTWDLGRKSLF 394

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVE 388
            +       +R+ +    S         G  IAF +        +     DGS  R L  
Sbjct: 395 SVDLPSGQSQRLVEGGYVS----APMDTGARIAFLRDDLRSPAELWTAAPDGSDARPLTH 450

Query: 389 DSN 391
            ++
Sbjct: 451 HND 453


>gi|113477367|ref|YP_723428.1| WD-40 repeat-containing protein [Trichodesmium erythraeum IMS101]
 gi|110168415|gb|ABG52955.1| WD-40 repeat [Trichodesmium erythraeum IMS101]
          Length = 1789

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 99/239 (41%), Gaps = 21/239 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            E++ +     ++ + +  G  ++ LT   +  +    FSP+ + +A A++D      V L
Sbjct: 1254 ETIATAGGDKTVKLWNGQGKLLQTLT-GHENGVNGIAFSPDGETIATASHDK----TVKL 1308

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             + R  +  + +   ++ +L   FS +G+    S  +D+ + ++  + + N  + LT+  
Sbjct: 1309 WN-RQGKLLQTLTGHKNWVLGIAFSPDGETIA-SASRDKTVKLW--NREGNLLQTLTSHE 1364

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  ++SPD   I   S       + +    G   + ++   E S +   +SP G+ I
Sbjct: 1365 KEVRGIAFSPDGKTIASAS----GTTVKLWNREGKLLQTLT-GYENSVYGIAFSPDGETI 1419

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            A          + +  + G   + L    N +    +SP G ++  + +   D   KL+
Sbjct: 1420 ATASRDNT---VKLWNRQGKLLQTLTGHKNSVYGIAFSPDGETIASASR---DNTVKLW 1472



 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 97/240 (40%), Gaps = 21/240 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            E++ +     ++ + +R G  ++ LT      +    FSP+ + +A A+ D      V L
Sbjct: 1295 ETIATASHDKTVKLWNRQGKLLQTLT-GHKNWVLGIAFSPDGETIASASRDK----TVKL 1349

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             + R     + + +    +    FS +GK           + ++  + +    + LT   
Sbjct: 1350 WN-REGNLLQTLTSHEKEVRGIAFSPDGKTIA--SASGTTVKLW--NREGKLLQTLTGYE 1404

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  ++SPD   I   + R+   +L+     G   + ++   + S +   +SP G+ I
Sbjct: 1405 NSVYGIAFSPDGETIA-TASRDNTVKLW--NRQGKLLQTLT-GHKNSVYGIAFSPDGETI 1460

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A          + +  + G   + L   +S+++A  +SP G+++  +     D   KL++
Sbjct: 1461 ASASRDNT---VKLWNRQGKLLQTLTGHESSVEAVAFSPDGKTIATAS---ADKTVKLWT 1514



 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 91/246 (36%), Gaps = 24/246 (9%)

Query: 199  DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            D           +  ++   FSP+ + +A A+ D+     V L + R  +  + +     
Sbjct: 942  DEFREINRIQGHENEVYGIAFSPDGETIASASADN----TVKLWN-REGKLLQTLTGHEK 996

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +    FS +G+    +   D+ + ++  + +    + LT         ++SPD   I  
Sbjct: 997  GVWDIAFSPDGETIA-TASHDKTVKLW--NREGKLLQTLTGHEKGVWDIAFSPDGETIA- 1052

Query: 319  ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                 G   + +    G+  + ++   E   +   +SP G+ IA    +G    + +  +
Sbjct: 1053 --TAGGDNTVKLWNRQGNLLQTLT-GHENWVYGIAFSPDGETIA---TAGGDNTVKLWNR 1106

Query: 379  DGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             G+  + L   +  +    +SP G ++       GD   KL++     R   L+ T    
Sbjct: 1107 QGNLLQTLTGHEKGVYGIAFSPDGETIA---SASGDNTVKLWN-----RQGKLLQTLTGH 1158

Query: 438  SDPQWV 443
             D  W 
Sbjct: 1159 KDSVWG 1164



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 96/253 (37%), Gaps = 20/253 (7%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             EKG +        E++ S    N++ + +R G  ++ LT  +D + +   FSP+ + +A
Sbjct: 1117 HEKGVYGIAFSPDGETIASASGDNTVKLWNRQGKLLQTLTGHKDSV-WGITFSPDGETIA 1175

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                       V L + R  +  + +    + +    FS +G+    +   D+ + ++  
Sbjct: 1176 ----TAGGDKTVKLWN-RQGKLLQTLTGHENGVFGIAFSPDGETIA-TAGGDKTVKLW-- 1227

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            + Q    + L+         ++SPD   I       G + + +    G   + ++   E 
Sbjct: 1228 NRQGKLLQTLSGHENSVYGIAFSPDGETIA---TAGGDKTVKLWNGQGKLLQTLT-GHEN 1283

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIF 406
                  +SP G+ IA          + +  + G   + L    N      +SP G ++  
Sbjct: 1284 GVNGIAFSPDGETIATASHDKT---VKLWNRQGKLLQTLTGHKNWVLGIAFSPDGETIAS 1340

Query: 407  SRKKDGDTGSKLY 419
            + +   D   KL+
Sbjct: 1341 ASR---DKTVKLW 1350


>gi|197104557|ref|YP_002129934.1| putative transcriptional regulator [Phenylobacterium zucineum HLK1]
 gi|196477977|gb|ACG77505.1| putative transcriptional regulator [Phenylobacterium zucineum HLK1]
          Length = 697

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 55/382 (14%), Positives = 105/382 (27%), Gaps = 104/382 (27%)

Query: 163 YQSITGEKGDFNSRIL------FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           Y  +T E+G      +       V        +   L +   D      +T S       
Sbjct: 173 YHPLTAERGLETHPAISPNGQQIVYSQRPDSTVGRDLYIRGVDQGTPVRIT-SHPADDHS 231

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDT-------------------------------- 244
             +SP   ++ +         ++ +                                   
Sbjct: 232 AAWSPAGDRIVFVRTVPNGPCQLVVAPVPLGPERVAAQCQSSTYTRVSWLDANTLAIGDR 291

Query: 245 -------------RIDRAPKRIGNFRSMILA---PRFSSNGKRALISVQK-DEAMDIYSV 287
                            A + + N  +  L    P  S +G+R          A D++  
Sbjct: 292 PAPDALWRIRAVDLTTGAVRDLTNPPADTLGDSDPMVSPDGRRVAFRRTLLHGADDLFVK 351

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKE 346
           DL +   + LT   +      +S DS  + + S+R G+  L+ + +    + +RIS    
Sbjct: 352 DLTTGREQALTTDGWKAAGYVWSADSRHLFYSSNRGGEFGLWTVDTRRPGEPRRISLGFG 411

Query: 347 --------------------------------------ASYFDPVWSPQG---DLIAFTK 365
                                                  +     W P+G     +A+  
Sbjct: 412 QLTFSRMSIDRRNRLAVELPRGRTNIALVGPDGAVTPVTNAAGADWEPEGAADGAVAYVS 471

Query: 366 FSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  + +    G+Q   L     S + +P WSP GRSL F   K     +++Y++  
Sbjct: 472 NRSGSSELWISPP-GTQPVRLTNIVGSYVHSPAWSPDGRSLAFVAVKG--RKAEIYTVAR 528

Query: 424 NGRNETLINTPAYAS-DPQWVG 444
           +G     +        +  W  
Sbjct: 529 DGSRLRAVTDDGTDKLETAWSP 550



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 105/314 (33%), Gaps = 36/314 (11%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           EF LW V  R+          P   R+I+       +  ++ ++    +R+         
Sbjct: 389 EFGLWTVDTRR----------PGEPRRISLGFGQLTFSRMSIDR---RNRLAVELPRG-- 433

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              + ++ ++  DGA       +     +EP  + +   VAY +          L  +  
Sbjct: 434 ---RTNIALVGPDGA--VTPVTNAAGADWEPEGAADGA-VAYVSNRSGSS---ELWISPP 484

Query: 247 DRAPKRIGN-FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              P R+ N   S + +P +S +G+       K    +IY+V    +    +T+     +
Sbjct: 485 GTQPVRLTNIVGSYVHSPAWSPDGRSLAFVAVKGRKAEIYTVARDGSRLRAVTDDGTDKL 544

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++SPD   + +      + ++  +        R   ++      P   P G L  F  
Sbjct: 545 ETAWSPDGRSLRYLQRTGARYRVMELALAPGASPRTLAERAWGQMRPG--PDGRL--FGV 600

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             G      +   DG         S+  A    P G  ++ +R+   +    L+    +G
Sbjct: 601 PVGGGP---LEALDGGAVPQ-ARLSSADAFAVGPEGAYVLRARR---EAAPSLWLHPWSG 653

Query: 426 RNETLINTPAYASD 439
               +   P    +
Sbjct: 654 PPRPIAVLPTGTGE 667



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAY 436
              S   L  E      P  SP+G+ +++S++ D   G  LY   ++ G    + + PA 
Sbjct: 169 TATSYHPLTAERGLETHPAISPNGQQIVYSQRPDSTVGRDLYIRGVDQGTPVRITSHPAD 228

Query: 437 ASDPQWVG 444
                W  
Sbjct: 229 DHSAAWSP 236


>gi|255566336|ref|XP_002524154.1| conserved hypothetical protein [Ricinus communis]
 gi|223536572|gb|EEF38217.1| conserved hypothetical protein [Ricinus communis]
          Length = 724

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 55/294 (18%), Positives = 103/294 (35%), Gaps = 70/294 (23%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS--SNGKRAL 273
            P FS +  K+A+   + + +        RI    K        I +P +S         
Sbjct: 392 FPTFSKDGSKLAFVDNEFKAVWVADSDGLRIVFETK----GPDNIFSPVWSQNPQDDTLY 447

Query: 274 I----SVQKDEAMDIYSV-DLQSNATER--LTNTLFINISASYSPDSSQIVFESDREGKE 326
           +    S    + + I ++ ++ S A  R  LT   F N   S SPD +++VF S R+G +
Sbjct: 448 VCMGPSFNAGQTLQICAIPNVASGARRRRQLTKG-FNNAFPSTSPDGTKLVFRSTRDGGD 506

Query: 327 ----QLYVMQ------SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-------- 368
                LY+M+             R++ +   +     WSP+GD I F+            
Sbjct: 507 KKYKNLYIMEDAQVGEYGDGKVTRLT-NGPWTDTHCQWSPRGDWIVFSSTRDKPKDAPET 565

Query: 369 ------EKFAIGVMKK-DGSQERLLVEDSNL-----QAPTWSPSGRSLIFSRK------- 409
                   FA+ ++K  D S    +++  +        P +SP G S+  +         
Sbjct: 566 DNGLDPGYFAVFLVKVNDPSVVIRVIKGGDDLAGHVNHPFFSPDGMSIAVTSDLAAVSAD 625

Query: 410 --------KDGDTGSKLYSIDLN----------GRNETLINTPAYASDPQWVGF 445
                           ++++D++           +   + ++    S P W  F
Sbjct: 626 PISLPLFLHSVRPYGDVFTVDIDPDDINKNKDVKKFNRITHSRYENSTPTWTMF 679



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/239 (20%), Positives = 86/239 (35%), Gaps = 41/239 (17%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIK------NSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
             + G F    +F + S     +        ++ V D DG  I + T   D I F P +S
Sbjct: 380 HPDVGLFRVSGVFPTFSKDGSKLAFVDNEFKAVWVADSDGLRIVFETKGPDNI-FSPVWS 438

Query: 221 PNQQKVAYA-----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALI 274
            N Q          +++    L++  +      A +R    +    A P  S +G + + 
Sbjct: 439 QNPQDDTLYVCMGPSFNAGQTLQICAIPNVASGARRRRQLTKGFNNAFPSTSPDGTKLVF 498

Query: 275 SVQKDEAM----DIYSV-DLQ-----SNATERLTNTLFINISASYSPDSSQIVFESDRE- 323
              +D       ++Y + D Q          RLTN  + +    +SP    IVF S R+ 
Sbjct: 499 RSTRDGGDKKYKNLYIMEDAQVGEYGDGKVTRLTNGPWTDTHCQWSPRGDWIVFSSTRDK 558

Query: 324 -------------GKEQLYVMQSNG-SDQKRISQDKE---ASYFDPVWSPQGDLIAFTK 365
                        G   +++++ N  S   R+ +  +        P +SP G  IA T 
Sbjct: 559 PKDAPETDNGLDPGYFAVFLVKVNDPSVVIRVIKGGDDLAGHVNHPFFSPDGMSIAVTS 617



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 79/255 (30%), Gaps = 24/255 (9%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYA---TYDDE 234
           F    V +      +         I+    +R +      F  +  +++ Y    +    
Sbjct: 305 FSDIRVEAQYRHIEIFDSTAPQQPIQITQKTRPKADHYNPFVVDGGKRIGYHRCKSDLLN 364

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               +     +++     +G FR   + P FS +G +       +E   ++  D      
Sbjct: 365 HGDDIQRHFHKLNSPHPDVGLFRVSGVFPTFSKDGSKLAFV--DNEFKAVWVADSDGLRI 422

Query: 295 ERLTNTLFINISASYS--PDSSQIVFE---SDREGKE-QLYVMQSNGSDQKRISQDKEA- 347
              T       S  +S  P    +      S   G+  Q+  + +  S  +R  Q  +  
Sbjct: 423 VFETKGPDNIFSPVWSQNPQDDTLYVCMGPSFNAGQTLQICAIPNVASGARRRRQLTKGF 482

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKF----AIGVMK-------KDGSQERLLVEDSNLQAPT 396
           +   P  SP G  + F             + +M+        DG   RL           
Sbjct: 483 NNAFPSTSPDGTKLVFRSTRDGGDKKYKNLYIMEDAQVGEYGDGKVTRLTNGPWTDTHCQ 542

Query: 397 WSPSGRSLIFSRKKD 411
           WSP G  ++FS  +D
Sbjct: 543 WSPRGDWIVFSSTRD 557



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 25/160 (15%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWS--PQGDL 360
           +  ++S D S++ F  +    + ++V  S+G    RI  + +   + F PVWS  PQ D 
Sbjct: 391 VFPTFSKDGSKLAFVDNE--FKAVWVADSDG---LRIVFETKGPDNIFSPVWSQNPQDDT 445

Query: 361 IAFTK----FSGEKFAIGVMK--KDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG- 412
           +         +G+   I  +     G  + R L +  N   P+ SP G  L+F   +DG 
Sbjct: 446 LYVCMGPSFNAGQTLQICAIPNVASGARRRRQLTKGFNNAFPSTSPDGTKLVFRSTRDGG 505

Query: 413 -DTGSKLYSID-------LNGRNETLINTPAYASDPQWVG 444
                 LY ++        +G+   L N P   +  QW  
Sbjct: 506 DKKYKNLYIMEDAQVGEYGDGKVTRLTNGPWTDTHCQWSP 545



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 57/155 (36%), Gaps = 17/155 (10%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--------- 327
           ++     +Y  +L++  T+RLT +   ++S S SP   ++   S +              
Sbjct: 158 RRQPWTVVYKTNLKTGKTDRLTPSGVNDLSPSVSPSGRKVAVASFQGKGWNGEIEDLQTD 217

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ----E 383
           ++VM        R+   K   +  P W    ++I F +  GE +++        Q     
Sbjct: 218 IHVMNVEKQPLGRMKVIKNGGW--PTWGSD-NVIFFHRKVGEFWSVFRADISNGQTSETL 274

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           R+  +  +   P  + +   +  +  +     S +
Sbjct: 275 RVTPDGIDAITPA-AINSTKVAVATIRQKSKFSDI 308



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 58/189 (30%), Gaps = 27/189 (14%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+I+  +  +    ++  + +  S  +G       + +      R    ++      P  
Sbjct: 430 DNIFSPVWSQNPQDDTLYVCMGPSFNAGQTLQICAIPNVASGARRRRQLTKGFNNAFPST 489

Query: 220 SPNQQKVAYATYD---DEDILRVYLMDTR-----IDRAPKRIGNFRSMILAPRFSSNGKR 271
           SP+  K+ + +     D+    +Y+M+        D    R+ N        ++S  G  
Sbjct: 490 SPDGTKLVFRSTRDGGDKKYKNLYIMEDAQVGEYGDGKVTRLTNGPWTDTHCQWSPRGDW 549

Query: 272 ALISVQKDEAMDIYSVD--LQSN-------------ATERLTNT----LFINISASYSPD 312
            + S  +D+  D    D  L                   R+               +SPD
Sbjct: 550 IVFSSTRDKPKDAPETDNGLDPGYFAVFLVKVNDPSVVIRVIKGGDDLAGHVNHPFFSPD 609

Query: 313 SSQIVFESD 321
              I   SD
Sbjct: 610 GMSIAVTSD 618



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 99/308 (32%), Gaps = 50/308 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRY----LTPSRDQILFEPRFSPNQQKVAYA 229
           +  +++V+    S   +    V+ +   N++                P  SP+ +KVA A
Sbjct: 143 DCSLIYVTTKDPSKDRRQPWTVVYK--TNLKTGKTDRLTPSGVNDLSPSVSPSGRKVAVA 200

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFR-------SMILAPRFSSNGKRALISVQKDEAM 282
           ++         + D + D     +                P + S+        +  E  
Sbjct: 201 SF-QGKGWNGEIEDLQTDIHVMNVEKQPLGRMKVIKNGGWPTWGSD-NVIFFHRKVGEFW 258

Query: 283 DIYSVDLQSNATE---RLTNTLFINISASYSP---DSSQIVFESDREGK----------- 325
            ++  D+ +  T    R+T    I+   + +P   +S+++   + R+             
Sbjct: 259 SVFRADISNGQTSETLRVTPD-GID---AITPAAINSTKVAVATIRQKSKFSDIRVEAQY 314

Query: 326 EQLYVMQSNGSDQK-RISQDKE--ASYFDPVWSPQGDLIAFTK------FSGEKFAIGVM 376
             + +  S    Q  +I+Q     A +++P     G  I + +        G+       
Sbjct: 315 RHIEIFDSTAPQQPIQITQKTRPKADHYNPFVVDGGKRIGYHRCKSDLLNHGDDIQRHFH 374

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPA 435
           K +     + +   +   PT+S  G  L F   +       ++  D +G R       P 
Sbjct: 375 KLNSPHPDVGLFRVSGVFPTFSKDGSKLAFVDNE----FKAVWVADSDGLRIVFETKGPD 430

Query: 436 YASDPQWV 443
               P W 
Sbjct: 431 NIFSPVWS 438


>gi|295083922|emb|CBK65445.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Bacteroides
           xylanisolvens XB1A]
          Length = 692

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 63/390 (16%), Positives = 132/390 (33%), Gaps = 78/390 (20%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDV---KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            G        +     V +  + V   K  +++       S     +I HT   +    +
Sbjct: 47  IGGFAVSPDGKKIAYTVAY--YSVPENKSNREVFVMNADGSENQ--QITHTPYQE--NEV 100

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T  KG   +++ F+S    +    + L  M+ DG+  + LT     I      SP+ +K+
Sbjct: 101 TWIKGG--TKLAFLS----NDNGSSQLYEMNPDGSGRKQLTNYDGDIEGY-SISPDGKKL 153

Query: 227 AYATY------------DDEDILRVYLMDTRIDRAPKRIG--------NFRSMILA---- 262
            + +             D      + + D       + +         +F    ++    
Sbjct: 154 LFISQVKTKESTADKYPDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVD 213

Query: 263 ------------P-------RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATE 295
                       P        +++   +   + +K            DIY  DL +  TE
Sbjct: 214 ILNGEPYESPMKPWGGIEQLAWNTTSDKVAYTCRKKTGLEYAISTNSDIYVYDLNTQKTE 273

Query: 296 RLTN-TLFINISASYSPDSSQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASY 349
            +T      + +  YSPD   I ++S +R+G      +L++M     +++ +S+  E++ 
Sbjct: 274 NITEENKGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKAFESNV 333

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              VW     +I FT     +  I  +       + +         + +  G  LI +++
Sbjct: 334 DAFVWGADAKMIYFTGVWHGESQIYALDLANDSVKAITSGMYDYE-SVALFGDKLI-AKR 391

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                G ++Y++ L+G    L        D
Sbjct: 392 HSMSMGDEIYTVALDGSTTQLTQENKQIYD 421



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 93/280 (33%), Gaps = 67/280 (23%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISV------QKD 279
           T D     +V +  + I    KR+          I     S +GK+   +V      +  
Sbjct: 13  TKDAGKTDQVLIEKSDIKIEGKRMTPEALWAMGRIGGFAVSPDGKKIAYTVAYYSVPENK 72

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +++ ++   +  +++T+T +     ++    +++ F S+  G  QLY M  +GS +K
Sbjct: 73  SNREVFVMNADGSENQQITHTPYQENEVTWIKGGTKLAFLSNDNGSSQLYEMNPDGSGRK 132

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK----------------------------- 370
           +++ + +        SP G  + F      K                             
Sbjct: 133 QLT-NYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTDLMYKHWDEW 191

Query: 371 ----FAIGVMKKDGSQERLLVEDSNLQAPTWSPS--------------GRSLIFS-RKKD 411
                   V   DG+    +V D     P  SP                  + ++ RKK 
Sbjct: 192 VTTAPHPFVADFDGNGISNIV-DILNGEPYESPMKPWGGIEQLAWNTTSDKVAYTCRKKT 250

Query: 412 G-----DTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           G      T S +Y  DLN +    I      Y ++PQ+  
Sbjct: 251 GLEYAISTNSDIYVYDLNTQKTENITEENKGYDTNPQYSP 290


>gi|227539264|ref|ZP_03969313.1| protease [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240946|gb|EEI90961.1| protease [Sphingobacterium spiritivorum ATCC 33300]
          Length = 1087

 Score = 97.4 bits (241), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 26/199 (13%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDRE 323
            S  G+RA+   +     +I++V  +      ++++        ++SP+   I + SD  
Sbjct: 319 VSPTGQRAIFEARG----EIFTVPKEKGDARNISSSPGSHERFPNWSPNGKWISYLSDAR 374

Query: 324 GKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           GK +L +      +D   IS      YFDP+WSP    + F   +     +  +  D  +
Sbjct: 375 GKYELVLRDQMAKNDPIYISLGDYYFYFDPIWSPDSKKLFF---NDAHLNLYYVDIDTKK 431

Query: 383 ERLLVED---------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN- 432
              + +D          N   P+WSP  + + + +    +T S ++  +L+ +    I  
Sbjct: 432 VTKVDDDVLGSHTNRTGNYFEPSWSPDSKWISYIKTLP-NTVSAVFMYNLDTKQSQQITD 490

Query: 433 ------TPAYASDPQWVGF 445
                  P ++ D +++ F
Sbjct: 491 GMSETHQPTFSRDGKYLFF 509



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 86/245 (35%), Gaps = 20/245 (8%)

Query: 141 GKKFFSSPASWRKIAHT----ISDDIYQSITGEKGDFNSRILFVSESVVSGII--KNSLC 194
           GK +  +  S +K AH      +D+ Y+           R   VS +    I   +  + 
Sbjct: 277 GKIYTFNIKS-KKTAHIPVQIFADNTYKRPHYSNISEGIRNWNVSPTGQRAIFEARGEIF 335

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + ++  + R ++ S       P +SPN + ++Y +        V       +       
Sbjct: 336 TVPKEKGDARNISSSPGSHERFPNWSPNGKWISYLSDARGKYELVLRDQMAKNDPIYISL 395

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--------TNTLFINIS 306
                   P +S + K+       D  +++Y VD+ +    ++        TN       
Sbjct: 396 GDYYFYFDPIWSPDSKKLFF---NDAHLNLYYVDIDTKKVTKVDDDVLGSHTNRTGNYFE 452

Query: 307 ASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S+SPDS  I +          +++   +    ++I+ D  +    P +S  G  + FT 
Sbjct: 453 PSWSPDSKWISYIKTLPNTVSAVFMYNLDTKQSQQIT-DGMSETHQPTFSRDGKYLFFTA 511

Query: 366 FSGEK 370
            +   
Sbjct: 512 STNTG 516



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 81/218 (37%), Gaps = 32/218 (14%)

Query: 229 ATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +     I  VY  D  I       PKR+     +   P FS +GK+   +   D  +D+
Sbjct: 35  PSISQNHISFVYGGDIWIAGRDGSNPKRLTVNPDVERNPMFSPDGKQIAFTGNYDGNVDV 94

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKR 340
           Y++ +     +R+T     ++   +  ++ ++ F S +        +LY +  N    + 
Sbjct: 95  YTISVAGGEPKRITYHPAADVMRGWI-NNQELYFTSTQEFQYSLGSRLYKININKGKDEA 153

Query: 341 ISQDKEASYFDPVWSPQGDL--------------IAFTKFSGEKF-AIGVMKKDGSQERL 385
           +      + F+   SP G+               +AF ++ G    +I +     +   +
Sbjct: 154 L---PMPTAFEGSPSPDGNYWAYLKNSDPTEREVVAFKRYRGGGMPSIWIFNNKTNDIEI 210

Query: 386 LV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +  E SN   P W   G  + F   +  D    ++S D
Sbjct: 211 IPGEKSNNVKPIWL--GDKIYFLSDR--DKIVNIFSYD 244



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 78/213 (36%), Gaps = 20/213 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP  Q+  +     E    ++ +      A     +  S    P +S NGK         
Sbjct: 320 SPTGQRAIF-----EARGEIFTVPKEKGDARNISSSPGSHERFPNWSPNGKWISYLSDAR 374

Query: 280 EAMDIYSVD-LQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              ++   D +  N    ++   +       +SPDS ++ F    +    LY +  +   
Sbjct: 375 GKYELVLRDQMAKNDPIYISLGDYYFYFDPIWSPDSKKLFFN---DAHLNLYYVDIDTKK 431

Query: 338 QKRI-------SQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVED 389
             ++         ++  +YF+P WSP    I++ K       A+ +   D  Q + + + 
Sbjct: 432 VTKVDDDVLGSHTNRTGNYFEPSWSPDSKWISYIKTLPNTVSAVFMYNLDTKQSQQITDG 491

Query: 390 -SNLQAPTWSPSGRSLIFS-RKKDGDTGSKLYS 420
            S    PT+S  G+ L F+     G T S L+ 
Sbjct: 492 MSETHQPTFSRDGKYLFFTASTNTGLTNSGLHM 524



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 57/149 (38%), Gaps = 21/149 (14%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + SP   + +FE+    + +++ +     D + IS    +    P WSP G  I++   +
Sbjct: 318 NVSPTGQRAIFEA----RGEIFTVPKEKGDARNISSSPGSHERFPNWSPNGKWISYLSDA 373

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             K+ + +  +    + + +   +      P WSP  + L F      D    LY +D++
Sbjct: 374 RGKYELVLRDQMAKNDPIYISLGDYYFYFDPIWSPDSKKLFF-----NDAHLNLYYVDID 428

Query: 425 GRNETLINTP---------AYASDPQWVG 444
            +  T ++               +P W  
Sbjct: 429 TKKVTKVDDDVLGSHTNRTGNYFEPSWSP 457



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 86/217 (39%), Gaps = 28/217 (12%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +S++ +S +    + +  RDG+N + LT + D +   P FSP+ +++A+    D + + V
Sbjct: 37  ISQNHISFVYGGDIWIAGRDGSNPKRLTVNPD-VERNPMFSPDGKQIAFTGNYDGN-VDV 94

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----AMDIYSVDLQSNATE 295
           Y +       PKRI    +  +   +  N +    +  ++        +Y +++     E
Sbjct: 95  YTISV-AGGEPKRITYHPAADVMRGW-INNQELYFTSTQEFQYSLGSRLYKININKGKDE 152

Query: 296 RLTNTLFINISASYSPDSSQ--------------IVFESDREGK-EQLYVMQSNGSDQKR 340
            L        S   SPD +               + F+  R G    +++  +  +D + 
Sbjct: 153 ALPMPTAFEGSP--SPDGNYWAYLKNSDPTEREVVAFKRYRGGGMPSIWIFNNKTNDIE- 209

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           I   ++++   P+W   GD I F     +   I    
Sbjct: 210 IIPGEKSNNVKPIWL--GDKIYFLSDRDKIVNIFSYD 244


>gi|145522898|ref|XP_001447293.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414793|emb|CAK79896.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2077

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 104/303 (34%), Gaps = 40/303 (13%)

Query: 130  LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            LWDVK  + +  KK          +     D I                       SG  
Sbjct: 1279 LWDVKLGQDM--KKLKGHTEKVSTLCIAPDDSIL---------------------ASGSF 1315

Query: 190  KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              S+ + + +    R+L    +  +    FSP+   +A  +YD      + L D +    
Sbjct: 1316 DRSIRLWNIETGQQRFLLEGHNDFVQSLCFSPDGATLASGSYD----CSLRLWDVKSGLE 1371

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              ++   +  + +  FS +G     S   D+ + ++S+       ++L        S  +
Sbjct: 1372 KLKLDGHKLGVYSVCFSPDGNTLA-SGSGDKVIRLWSL-KTGLEKKKLEGHSGCIQSVKF 1429

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            SPD + +   S+    + + +        K+I +  +       +SP G+++A       
Sbjct: 1430 SPDGATLASGSE---DKSIRIWDIRLGQVKQIFEGHQNWIRSICFSPDGNILASGSQDKS 1486

Query: 370  KFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               I +      QER  +E       T  +SP G +L       GD    L+ +  +  N
Sbjct: 1487 ---IRIWDLRSGQERKRLEGHRSWISTVCFSPDGTTLA---SGGGDQLICLWDVRSDKNN 1540

Query: 428  ETL 430
            +  
Sbjct: 1541 QKQ 1543



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 61/341 (17%), Positives = 116/341 (34%), Gaps = 40/341 (11%)

Query: 120  GKDRLRVEFRLWDVKDRKQ---IIGKKFFSSPASWRKIAHTIS----DDIYQ-------- 164
                     RLWDVK   +   + G K       +    +T++    D + +        
Sbjct: 1353 ASGSYDCSLRLWDVKSGLEKLKLDGHKLGVYSVCFSPDGNTLASGSGDKVIRLWSLKTGL 1412

Query: 165  ---SITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
                + G  G   S        ++ SG    S+ + D     ++ +       +    FS
Sbjct: 1413 EKKKLEGHSGCIQSVKFSPDGATLASGSEDKSIRIWDIRLGQVKQIFEGHQNWIRSICFS 1472

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+   +A  + D      + + D R  +  KR+   RS I    FS +G     S   D+
Sbjct: 1473 PDGNILASGSQDK----SIRIWDLRSGQERKRLEGHRSWISTVCFSPDGTTLA-SGGGDQ 1527

Query: 281  AMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             + ++ V    N  ++      IN   S  +SPD + +       G   + +  +    +
Sbjct: 1528 LICLWDVRSDKNNQKQ---QGKINWVFSVCFSPDGTILA---SGNGDNSIRLWDAKSGQE 1581

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-- 396
            K   +   +  +   +SP G L+A          I +   +  Q++ L+E    +  +  
Sbjct: 1582 KNNLEGHRSWVYSICFSPDGTLLASGSDDKS---IRLWDVESGQQKNLLELHTQEIYSIC 1638

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            +SP G +L        D    L+ + L  +   L       
Sbjct: 1639 FSPDGNTLA---SGGEDKSILLWDLKLWKQKIKLEGINGSV 1676



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 58/312 (18%), Positives = 111/312 (35%), Gaps = 47/312 (15%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++  G     +  RLWD K  ++    +            H     +Y       G  
Sbjct: 1559 GTILASGNGDNSI--RLWDAKSGQEKNNLE-----------GHR--SWVYSICFSPDGTL 1603

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                        SG    S+ + D +    + L     Q ++   FSP+   +A      
Sbjct: 1604 L----------ASGSDDKSIRLWDVESGQQKNLLELHTQEIYSICFSPDGNTLA----SG 1649

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
             +   + L D ++ +   ++      +L+  FS +G   LI         I   D+ S  
Sbjct: 1650 GEDKSILLWDLKLWKQKIKLEGINGSVLSVCFSPDG---LILASGCGDNSILLWDMDSGQ 1706

Query: 294  TE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             + +L        S  +S     +   S  +   +L+ + ++G + K+I    E +    
Sbjct: 1707 QKLKLEGHNERVYSVCFSSFGDILA-SSSHDQSIRLWRV-ASGEEIKKI----EGNSRSV 1760

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKK 410
             +SP G L+AF  +S   ++I +   +  QE  ++E  N       +SP    L+ S   
Sbjct: 1761 CFSPDGTLLAFASWS---YSISIWDLNLMQELYILEGHNDSVSQINFSPDSNLLVSSSY- 1816

Query: 411  DGDTGSKLYSID 422
              D   +L+ + 
Sbjct: 1817 --DKSIRLWDVS 1826



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 106/302 (35%), Gaps = 38/302 (12%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     RLW+++  +Q             R +    +D +        G        
Sbjct: 1311 ASGSFDRSIRLWNIETGQQ-------------RFLLEGHNDFVQSLCFSPDGA------- 1350

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
               ++ SG    SL + D      +         ++   FSP+   +A  + D      +
Sbjct: 1351 ---TLASGSYDCSLRLWDVKSGLEKLKLDGHKLGVYSVCFSPDGNTLASGSGDK----VI 1403

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             L   +     K++      I + +FS +G     S  +D+++ I+  D++    +++  
Sbjct: 1404 RLWSLKTGLEKKKLEGHSGCIQSVKFSPDGATLA-SGSEDKSIRIW--DIRLGQVKQIFE 1460

Query: 300  -TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   S  +SPD + +   S     + + +       +++  +   +      +SP G
Sbjct: 1461 GHQNWIRSICFSPDGNILASGSQ---DKSIRIWDLRSGQERKRLEGHRSWISTVCFSPDG 1517

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              +A +    +   +  ++ D + ++   + + + +  +SP G  L      +GD   +L
Sbjct: 1518 TTLA-SGGGDQLICLWDVRSDKNNQKQQGKINWVFSVCFSPDGTILA---SGNGDNSIRL 1573

Query: 419  YS 420
            + 
Sbjct: 1574 WD 1575



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 55/354 (15%), Positives = 115/354 (32%), Gaps = 79/354 (22%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++  G D   +  RLWDV+  +Q    +  +              +IY       G  
Sbjct: 1601 GTLLASGSDDKSI--RLWDVESGQQKNLLELHTQ-------------EIYSICFSPDG-- 1643

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     ++ SG    S+ + D      +      +  +    FSP+   +A    D+
Sbjct: 1644 --------NTLASGGEDKSILLWDLKLWKQKIKLEGINGSVLSVCFSPDGLILASGCGDN 1695

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + L D    +   ++      + +  FSS G     S   D+++ ++ V      
Sbjct: 1696 ----SILLWDMDSGQQKLKLEGHNERVYSVCFSSFGDILA-SSSHDQSIRLWRV-ASGEE 1749

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             +++      + S  +SPD + + F S       + +   N   +  I +    S     
Sbjct: 1750 IKKI---EGNSRSVCFSPDGTLLAFAS---WSYSISIWDLNLMQELYILEGHNDSVSQIN 1803

Query: 354  WSPQGDLIAFTKFS------------GEKFAIGVMK----KDGS---------------- 381
            +SP  +L+  + +              +K  +  +      DG+                
Sbjct: 1804 FSPDSNLLVSSSYDKSIRLWDVSQKQDKKLQLRAISACLSPDGTTLATGCLDKLIRLWDL 1863

Query: 382  -----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                 + +L+  +  +++ T+SP G  L       G   + +Y  D    N  +
Sbjct: 1864 KSGDQKMKLIGHNQRVESVTFSPDGAILA-----SGSFDASIYLWDTKSGNLKI 1912



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 67/186 (36%), Gaps = 22/186 (11%)

Query: 121  KDRLRVEFRLWDVKDRK----QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD---- 172
                    RLWDV  ++    Q+       SP     +A    D + +    + GD    
Sbjct: 1813 SSSYDKSIRLWDVSQKQDKKLQLRAISACLSPDGT-TLATGCLDKLIRLWDLKSGDQKMK 1871

Query: 173  ---FNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                N R+  V+ S       SG    S+ + D    N++       + +   +FSP   
Sbjct: 1872 LIGHNQRVESVTFSPDGAILASGSFDASIYLWDTKSGNLKIRINGHSKSVLSLQFSPKGT 1931

Query: 225  KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
             +A  + D      + L D        ++    + +    FSS+G         D+++++
Sbjct: 1932 ILASGSLDG----SLRLWDVNSGSEKLKLRGLTNQVQILCFSSDGTVVA-QGALDKSINM 1986

Query: 285  YSVDLQ 290
            + ++L+
Sbjct: 1987 WDINLE 1992


>gi|332882340|ref|ZP_08449968.1| peptidase, S9A/B/C family, catalytic domain protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332679724|gb|EGJ52693.1| peptidase, S9A/B/C family, catalytic domain protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 734

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 78/268 (29%), Gaps = 59/268 (22%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------IY 285
           +D  I+    +    DR           I     S + ++ + +V             +Y
Sbjct: 23  NDGQIIGKNQITLTGDRLTPEALWAMGRIGTFAVSPDAQKIVYTVSYYSVQQNKSHTVLY 82

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            +D        LT T       +++PD  +I F S + G  Q++ M  +G+ ++++S   
Sbjct: 83  LMDADGANPTLLTTTADNESEPAFTPDGQKITFLSGKSGSSQIWEMALDGTSRRQVSFCH 142

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEK----------------------------------- 370
           +       +SP G  +                                            
Sbjct: 143 K-DVEGYKFSPDGKKVIIVHSVDTYTSIEKKYDDLPLSSGMVITDLNYKHWDHYVTTIPH 201

Query: 371 -FAIGVMKKDGSQERLLVEDSNLQAPT----------WSPSGRSLIFSRKKDGD------ 413
            F   V          L+     + P           WSP  R ++++ +K         
Sbjct: 202 IFVADVQDGRTGDGIDLLNGEPFECPMLPFGGSEQFNWSPDSRYIVYTSRKKTGRDYAIS 261

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQ 441
           T S +Y  D        +  P+   +P+
Sbjct: 262 TDSDIYRYDTATGQTENLCKPSDYKEPE 289



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 105/309 (33%), Gaps = 62/309 (20%)

Query: 174 NSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
             +I++     SV        L +MD DGAN   LT + D    EP F+P+ QK+ + + 
Sbjct: 60  AQKIVYTVSYYSVQQNKSHTVLYLMDADGANPTLLTTTADN-ESEPAFTPDGQKITFLS- 117

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS----V 287
                 +++ M      + +++      +   +FS +GK+ +I    D    I      +
Sbjct: 118 GKSGSSQIWEMALD-GTSRRQVSFCHKDVEGYKFSPDGKKVIIVHSVDTYTSIEKKYDDL 176

Query: 288 DLQSNATERLT--NTLFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGS--DQKRIS 342
            L S     +T  N    +   +  P     +F +D ++G+    +   NG   +   + 
Sbjct: 177 PLSSGMV--ITDLNYKHWDHYVTTIPH----IFVADVQDGRTGDGIDLLNGEPFECPMLP 230

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--SGEKF------AIGVMKKDGSQERLLVEDSNLQA 394
                 +    WSP    I +T    +G  +       I        Q   L + S+ + 
Sbjct: 231 FGGSEQFN---WSPDSRYIVYTSRKKTGRDYAISTDSDIYRYDTATGQTENLCKPSDYKE 287

Query: 395 P----------------------------TWSPSGRSLIFSRKKDGDTGS---KLYSIDL 423
           P                             +SP G+ + +         S   +L  +DL
Sbjct: 288 PEIDPSRSMEHQAINHLDRDCNVGYDTNPAYSPDGKYVAWLSMARNGYESDRTRLCVLDL 347

Query: 424 NGRNETLIN 432
               +T + 
Sbjct: 348 KTGAKTYVT 356



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 79/293 (26%), Gaps = 84/293 (28%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV-------AYATYDDE--- 234
                 + +  M  DG + R ++     +    +FSP+ +KV        Y + + +   
Sbjct: 117 SGKSGSSQIWEMALDGTSRRQVSFCHKDVEGY-KFSPDGKKVIIVHSVDTYTSIEKKYDD 175

Query: 235 -------------------------DILRVYLMDTRIDRAPKRIGNFR--------SMIL 261
                                     I    + D R       +                
Sbjct: 176 LPLSSGMVITDLNYKHWDHYVTTIPHIFVADVQDGRTGDGIDLLNGEPFECPMLPFGGSE 235

Query: 262 APRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERL---------------- 297
              +S + +  + + +K            DIY  D  +  TE L                
Sbjct: 236 QFNWSPDSRYIVYTSRKKTGRDYAISTDSDIYRYDTATGQTENLCKPSDYKEPEIDPSRS 295

Query: 298 -----TNTL------FINISASYSPDSSQIVFESD-REG----KEQLYVMQSNGSDQKRI 341
                 N L        + + +YSPD   + + S  R G    + +L V+      +  +
Sbjct: 296 MEHQAINHLDRDCNVGYDTNPAYSPDGKYVAWLSMARNGYESDRTRLCVLDLKTGAKTYV 355

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           ++  ++      W+       FT     +  I      G    L   D +  A
Sbjct: 356 TEAFQSGVDGFCWAADSRSFYFTGVWQARSMIHSTNLKGEVRPLTTGDFDYGA 408


>gi|117619629|ref|YP_855157.1| putative Tricorn protease homolog 1 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561036|gb|ABK37984.1| putative Tricorn protease homolog 1 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 1053

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 88/243 (36%), Gaps = 27/243 (11%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            L EP  SP+ +++A+         RVYL           + +   +   P +S +GK  
Sbjct: 23  WLREPALSPDGKQLAFTWQG-----RVYL-SAGDGGPAVPLTDGNYLSQRPLWSPDGKLI 76

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +       D++ V        RLT     ++  ++S D  Q++  S R          
Sbjct: 77  AFAANLYGNEDVFVVPSHGGEMVRLTRDSRPDLPQAFSADGKQLLLSSQRLTDPDADHFV 136

Query: 333 SNGSDQKRISQ----DKEASYFDPVWS----PQGDLIAFTK------FSGEKFAIGVMKK 378
           + G     +          +   P+ +    P G  +A+        F   + +  V + 
Sbjct: 137 AEGYQAGNLYWTPVAGGPLTPAQPLPATLARPHGSQLAYQMPGMDQPFRKHQHSFAVSRL 196

Query: 379 ---DGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT 433
              DG Q R L ED      P W   G+ L +  ++ GD    ++  DL +G++  L + 
Sbjct: 197 WLFDGKQHRQLTEDRVAASDPVWDEQGKQLYYLSERSGDF--NVWQRDLASGQDRQLTHF 254

Query: 434 PAY 436
             +
Sbjct: 255 KGH 257



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 61/335 (18%), Positives = 117/335 (34%), Gaps = 43/335 (12%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              L+D K  +Q+   +  +S   W +    +       ++   GDFN         + S
Sbjct: 195 RLWLFDGKQHRQLTEDRVAASDPVWDEQGKQL-----YYLSERSGDFN----VWQRDLAS 245

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G  +    +    G  +R L+ SR   L    +S   +   Y      D  R  ++    
Sbjct: 246 GQDR---QLTHFKGHPVRGLSASRQGDLV---WSWQGE--LYRLDAGSDTPRKLVIQPLF 297

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            + P         I       +G+  ++  Q D    +Y+VD +     +LT       +
Sbjct: 298 AKVPAEQSWQPGPIDEAIARQDGEEVILVSQGD----LYAVDTRRERVRQLTRHPSEQSA 353

Query: 307 ASYSPDSSQIVFESDREGKEQLYVM-----QSNGSDQKRISQDK-----EASYFDPVWSP 356
             Y     ++++ S++EG   LY +         SD   ++++K      A+   P  SP
Sbjct: 354 PRYLDKEQELIYLSEQEGPAALYRLKKGQPDKLFSDPGPLTEEKLLAIPGAAISVPTLSP 413

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-----DSNLQAPTWSPSGRSLIFSRKKD 411
            G  +AF     +  A+ ++     ++R LV        +     ++P  R L  + + D
Sbjct: 414 DGKQLAFVV---DGQAVHLLDLASGKQRQLVAAEFNPSRHAVELAFAPDSRHLALTIQPD 470

Query: 412 GDTGSKLYSIDLNGRNETLIN---TPAYASDPQWV 443
                ++  ID        +N         +P W 
Sbjct: 471 -SAQQEIAVIDTRDAKAKPVNVSLNGYRDGEPAWS 504



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 56/292 (19%), Positives = 104/292 (35%), Gaps = 57/292 (19%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  + +   DG     LT   + +   P +SP+ + +A+A     +   V+++ +   
Sbjct: 39  TWQGRVYLSAGDGGPAVPLTDG-NYLSQRPLWSPDGKLIAFAANLYGNE-DVFVVPSHGG 96

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK-------------DEAMDIYSVDLQSNAT 294
               R+       L   FS++GK+ L+S Q+              +A ++Y   +     
Sbjct: 97  EMV-RLTRDSRPDLPQAFSADGKQLLLSSQRLTDPDADHFVAEGYQAGNLYWTPVAGGPL 155

Query: 295 E---RLTNTLFINISASYSPDSSQIVFESDREGKEQLY-----------VMQSNGSDQKR 340
                L  TL         P  SQ+ ++    G +Q +           +   +G   ++
Sbjct: 156 TPAQPLPATLAR-------PHGSQLAYQ--MPGMDQPFRKHQHSFAVSRLWLFDGKQHRQ 206

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           +++D+ A+  DPVW  QG  + +       F +        Q+R L        P     
Sbjct: 207 LTEDRVAA-SDPVWDEQGKQLYYLSERSGDFNVWQRDLASGQDRQLTH--FKGHPV---- 259

Query: 401 GRSLIFSRKKDGD----TGSKLYSIDLNGRNET-LINTPAYASDPQ---WVG 444
            R L  S  + GD       +LY +D        L+  P +A  P    W  
Sbjct: 260 -RGL--SASRQGDLVWSWQGELYRLDAGSDTPRKLVIQPLFAKVPAEQSWQP 308



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 80/216 (37%), Gaps = 31/216 (14%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + ++V   +  D     +Y +DTR +R  +++    S   APR+    +  +   +++  
Sbjct: 319 DGEEVILVSQGD-----LYAVDTRRER-VRQLTRHPSEQSAPRYLDKEQELIYLSEQEGP 372

Query: 282 MDIYSVDLQSNATERLTNTLFINIS-------------ASYSPDSSQIVFESDREGKEQL 328
             +Y   L+    ++L +                     + SPD  Q+ F  D    + +
Sbjct: 373 AALYR--LKKGQPDKLFSDPGPLTEEKLLAIPGAAISVPTLSPDGKQLAFVVD---GQAV 427

Query: 329 YVMQSNGSDQKRIS---QDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQER 384
           +++      Q+++     +      +  ++P    +A T +    +  I V+    ++ +
Sbjct: 428 HLLDLASGKQRQLVAAEFNPSRHAVELAFAPDSRHLALTIQPDSAQQEIAVIDTRDAKAK 487

Query: 385 LL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            +   +       P WS  G  L +   K G  G+ 
Sbjct: 488 PVNVSLNGYRDGEPAWSQDGGILYWQSTKYGVLGAD 523


>gi|320161707|ref|YP_004174932.1| hypothetical protein ANT_23060 [Anaerolinea thermophila UNI-1]
 gi|319995561|dbj|BAJ64332.1| hypothetical protein ANT_23060 [Anaerolinea thermophila UNI-1]
          Length = 451

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 55/285 (19%), Positives = 112/285 (39%), Gaps = 26/285 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-------D 232
           +  S  +      L  + RDG+  R +          P F P    +AY+          
Sbjct: 173 LVYSAYNDQQGMDLWQVRRDGSENRKILDCGADWCLNPAFHPQGTWLAYSRRLAPIQQGA 232

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
              + RV+L+D   +       +       P ++  G+R L+       +    VDL++ 
Sbjct: 233 QPGVPRVWLLDLTSNTTQPISPDPNVSGSEPLWAPVGRRLLMWDGLSGGLRG--VDLEAQ 290

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQKRI--SQDKE 346
            +  + + +   +SA+++P+   I+F     G+     ++Y    +    +R+  S +  
Sbjct: 291 QSIVIPSDMG--MSATWTPNGKAILFTRMVLGETVAYAEVYRYDWDTQTIERVLGSSEMP 348

Query: 347 ASYFDPVWSPQGDLIAFTKF---SGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSG 401
             Y  PV+SP G  +A        G    + + + DGS+  L+  D  +   +  W P G
Sbjct: 349 RDYSVPVFSPDGQWMAVGLREIQEGPARQLWLFRPDGSEGTLVAGDPLINFSSFHWHPQG 408

Query: 402 RSLIFSRKKDGDTG--SKLYSIDLNGRNETLINTPAYASDPQWVG 444
            ++   +   G +    ++  +DL+    +L+     A+ PQW+ 
Sbjct: 409 NAIALQQITLGSSSARPQVAILDLSTHTVSLLAD--DATFPQWLP 451



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 102/291 (35%), Gaps = 77/291 (26%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQ 277
            +++ +           Y +  R     +   + R++  A  +     S      L  + 
Sbjct: 82  GERLLFYPRVPFRQDETYTLSLREGVKAR---DGRTLKRAFAWTFTVRSP----LLAYLF 134

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSNG 335
              + +I+  +  +     +T T       + +PD   +V+ +  D++G   L+ ++ +G
Sbjct: 135 PSASAEIWIQNPGTAEKRAITQTGGRVFDYAVAPDGETLVYSAYNDQQG-MDLWQVRRDG 193

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLV 387
           S+ ++I         +P + PQG  +A+++               + ++    +  + + 
Sbjct: 194 SENRKILDCGADWCLNPAFHPQGTWLAYSRRLAPIQQGAQPGVPRVWLLDLTSNTTQPIS 253

Query: 388 EDSNL------------------------------------------QAPTWSPSGRSLI 405
            D N+                                           + TW+P+G++++
Sbjct: 254 PDPNVSGSEPLWAPVGRRLLMWDGLSGGLRGVDLEAQQSIVIPSDMGMSATWTPNGKAIL 313

Query: 406 FSRKKDGDTG--SKLYSIDLNGRNETLI----------NTPAYASDPQWVG 444
           F+R   G+T   +++Y  D + +    +          + P ++ D QW+ 
Sbjct: 314 FTRMVLGETVAYAEVYRYDWDTQTIERVLGSSEMPRDYSVPVFSPDGQWMA 364


>gi|170110788|ref|XP_001886599.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164638612|gb|EDR02889.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1532

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 54/320 (16%), Positives = 108/320 (33%), Gaps = 47/320 (14%)

Query: 128  FRLWDVKDRKQI--------IGKKFFSSPASWRKIAHTIS----------------DDIY 163
             ++WD K  K +        +      SP S     H I+                D + 
Sbjct: 960  IKVWDTKTGKLLREFESPENVANSLVFSPDS-----HKIASGAAGGSVWVWDAKTGDHLI 1014

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            +         +      S  VVSG     + + D D  +I          +    FSP+ 
Sbjct: 1015 EMQGHSGWVSSVSFSPDSHKVVSGSFDRLILLWDADTGHILSKLQGHSAFVLSVAFSPDG 1074

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             ++   + D      V + D +I    +++    + + +  F  +G++  IS   D +++
Sbjct: 1075 NQIVSGSRDH----SVCVWDAKIGHLLRKLQGHTNCVGSVTFLPDGQKI-ISSSHDGSIN 1129

Query: 284  IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            ++  D ++              S S+SPD  QIV  S       + V ++    Q +  Q
Sbjct: 1130 VW--DAKTGQLREQEGHANSVTSVSFSPDGHQIVSGSL---DNSVRVWETKSGHQLKELQ 1184

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSG 401
                     ++SP G+ I    +     +I +       +   ++  +    +  +SP G
Sbjct: 1185 GHADHVSSVMFSPDGNQIVSGSYD---HSIKIWDVKTGHQLKTLQGHSDWVLSVVFSPDG 1241

Query: 402  RSLIFSRKKDGDTGSKLYSI 421
              ++      GD    L+  
Sbjct: 1242 HLIV---SGSGDKSVCLWDT 1258



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 102/304 (33%), Gaps = 44/304 (14%)

Query: 108  AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            A  + +     +G       L    R+W+ K   Q+   +            H  +D + 
Sbjct: 1145 ANSVTSVSFSPDGHQIVSGSLDNSVRVWETKSGHQLKELQ-----------GH--ADHVS 1191

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              +    G            +VSG   +S+ + D    +           +    FSP+ 
Sbjct: 1192 SVMFSPDG----------NQIVSGSYDHSIKIWDVKTGHQLKTLQGHSDWVLSVVFSPDG 1241

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
              +   + D      V L DT+     K++     M+ +  FS  G   + S   D+++ 
Sbjct: 1242 HLIVSGSGDK----SVCLWDTKTGYQLKKLKGHTHMVGSVAFSPQGDYIV-SGSWDQSVW 1296

Query: 284  IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            ++ V +  +   +L        S ++SPD  QI+  S       + +        +++ Q
Sbjct: 1297 VWDVKM-GHHLMKLQGHTDHVYSVTFSPDGRQIMSCSL---DNSIRLWDIKTG--QQLMQ 1350

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLV-EDSNLQAPTWSPSG 401
                      +SP    I     SG    + V      Q  R+L    S + +  +SP G
Sbjct: 1351 LHNPVPLSAAFSPDSHQII----SGSCQLVQVWDAKTGQKLRVLKGHTSTVDSVAFSPDG 1406

Query: 402  RSLI 405
              ++
Sbjct: 1407 NQIV 1410



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 105/293 (35%), Gaps = 46/293 (15%)

Query: 108  AQVLVTGRVIKEGK----DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            A  + +     +G            ++WDVK   Q+   +            H  SD + 
Sbjct: 1187 ADHVSSVMFSPDGNQIVSGSYDHSIKIWDVKTGHQLKTLQ-----------GH--SDWVL 1233

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              +    G            +VSG    S+C+ D               ++    FSP  
Sbjct: 1234 SVVFSPDG----------HLIVSGSGDKSVCLWDTKTGYQLKKLKGHTHMVGSVAFSPQG 1283

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
              +   ++D      V++ D ++     ++      + +  FS +G++  +S   D ++ 
Sbjct: 1284 DYIVSGSWDQ----SVWVWDVKMGHHLMKLQGHTDHVYSVTFSPDGRQI-MSCSLDNSIR 1338

Query: 284  IYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++  D+++   ++L      + +SA++SPDS QI+  S     + + V  +    + R+ 
Sbjct: 1339 LW--DIKTG--QQLMQLHNPVPLSAAFSPDSHQIISGSC----QLVQVWDAKTGQKLRVL 1390

Query: 343  QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            +   ++     +SP G+ I  +  S     +    KD      L        P
Sbjct: 1391 KGHTSTVDSVAFSPDGNQIV-SGSSDHSVRVWNANKDD----QLTNLQKYHNP 1438



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 47/250 (18%), Positives = 97/250 (38%), Gaps = 17/250 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     S+ V D     +R      + +     FSP+  ++   + D+     V + +T+
Sbjct: 1121 SSSHDGSINVWDAKTGQLREQEGHANSVTSV-SFSPDGHQIVSGSLDN----SVRVWETK 1175

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFIN 304
                 K +      + +  FS +G + + S   D ++ I+  D+++    + L       
Sbjct: 1176 SGHQLKELQGHADHVSSVMFSPDGNQIV-SGSYDHSIKIW--DVKTGHQLKTLQGHSDWV 1232

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +S  +SPD   IV  S   G + + +  +    Q +  +          +SPQGD I   
Sbjct: 1233 LSVVFSPDGHLIVSGS---GDKSVCLWDTKTGYQLKKLKGHTHMVGSVAFSPQGDYIVSG 1289

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +    + +  +K      +L     ++ + T+SP GR ++       D   +L+ I   
Sbjct: 1290 SWDQSVW-VWDVKMGHHLMKLQGHTDHVYSVTFSPDGRQIM---SCSLDNSIRLWDIK-T 1344

Query: 425  GRNETLINTP 434
            G+    ++ P
Sbjct: 1345 GQQLMQLHNP 1354



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/281 (19%), Positives = 96/281 (34%), Gaps = 38/281 (13%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              RLWD K   QII  +     +  + +A   S D                      VVS
Sbjct: 917  SVRLWDAKTGHQIINLQ--GHSSDVQSVA--FSPD-------------------CSEVVS 953

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G     + V D     +     S + +     FSP+  K+A           V++ D + 
Sbjct: 954  GSHDFLIKVWDTKTGKLLREFESPENVANSLVFSPDSHKIA----SGAAGGSVWVWDAKT 1009

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINI 305
                  +      + +  FS +  + ++S   D  + ++  D  +     +L       +
Sbjct: 1010 GDHLIEMQGHSGWVSSVSFSPDSHK-VVSGSFDRLILLW--DADTGHILSKLQGHSAFVL 1066

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S ++SPD +QIV  S R+    + V  +      R  Q          + P G  I  + 
Sbjct: 1067 SVAFSPDGNQIVSGS-RDHS--VCVWDAKIGHLLRKLQGHTNCVGSVTFLPDGQKIISSS 1123

Query: 366  FSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLI 405
              G    I V      Q R      +++ + ++SP G  ++
Sbjct: 1124 HDGS---INVWDAKTGQLREQEGHANSVTSVSFSPDGHQIV 1161



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 76/221 (34%), Gaps = 16/221 (7%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               +SL + D    ++         +++   FS N  ++A  + D      V L D +  
Sbjct: 871  KQDSSLLIWDIKTGHLLKKLQGHTDVVWSVAFSSNGNQIASCSKDK----SVRLWDAKTG 926

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-S 306
                 +    S + +  FS +    ++S   D  + ++  D ++    R   +      S
Sbjct: 927  HQIINLQGHSSDVQSVAFSPDCSE-VVSGSHDFLIKVW--DTKTGKLLREFESPENVANS 983

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              +SPDS +I   S   G   ++V  +   D     Q          +SP    +    F
Sbjct: 984  LVFSPDSHKIA--SGAAGGS-VWVWDAKTGDHLIEMQGHSGWVSSVSFSPDSHKVVSGSF 1040

Query: 367  SGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
                  I +   D      +L    + + +  +SP G  ++
Sbjct: 1041 DR---LILLWDADTGHILSKLQGHSAFVLSVAFSPDGNQIV 1078


>gi|299139737|ref|ZP_07032910.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
 gi|298598361|gb|EFI54526.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
          Length = 743

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 98/260 (37%), Gaps = 14/260 (5%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N L +    G N   L  S     F  R+ PN + + ++  D              DR P
Sbjct: 331 NDLYLTHLTG-NKPELYASLPGRAFWLRWEPNGKLLRFSMIDPISHTLSLWQLAASDRRP 389

Query: 251 KRIG---NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ-SNATERLTNTLFINIS 306
           + +    +  S      +++ G+  +         D++ +  + +    RLT+      S
Sbjct: 390 EPVLAGFSNPSSECCGVWANGGRTFVFQSSHGGNTDLWKLSGESTKNPVRLTDGPLEFQS 449

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              +P+ S+ VF    + + +L  +  NG       +   +S     ++  G  +A+T  
Sbjct: 450 PVAAPNGSR-VFFLGVDARSELERVTPNGELVPE--KGFLSSAVRVDYTRDGKWVAWTDS 506

Query: 367 SGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +G    +      G ++ LL  +  ++    WSP G  L    ++ G    ++Y +  NG
Sbjct: 507 AG---QLWRANASGEEKLLLTPDTFDVFLAHWSPDGSRLALMAREPGK-AWQIYLVGANG 562

Query: 426 RN-ETLINTPAYASDPQWVG 444
            +   L+     A+DP W  
Sbjct: 563 NDLAPLLQESRNAADPSWSP 582



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 74/220 (33%), Gaps = 24/220 (10%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE- 280
           + + VA+      D                 +      +    +S +G R  +  ++   
Sbjct: 497 DGKWVAWT-----DSAGQLWRANASGEEKLLLTPDTFDVFLAHWSPDGSRLALMAREPGK 551

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--ESDREGKEQ----LYVMQSN 334
           A  IY V    N    L          S+SPD   +VF   +D  GKE     L++    
Sbjct: 552 AWQIYLVGANGNDLAPLLQESRNAADPSWSPDGQSLVFGRINDAMGKENASRTLHIFHLK 611

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            +  +++        F P WSP G  IA       +  +  +  D + + L V       
Sbjct: 612 TNQMEQV--PASDGLFSPRWSPDGHYIAALTLDQRQVKLYDV-ADHTWKALSVPSGAD-- 666

Query: 395 PTWSPSGRSLIFSRKKDGDTGSK--LYSIDL-NGRNETLI 431
           P W+   RSL       G       +Y + + +G  + ++
Sbjct: 667 PVWASDSRSLY----VHGSLVPAQPIYRVSIPDGHVQEIV 702



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 65/179 (36%), Gaps = 14/179 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L   +  G   + L       +F   +SP+  ++A    +     ++YL+    +    
Sbjct: 509 QLWRANASGE-EKLLLTPDTFDVFLAHWSPDGSRLALMAREPGKAWQIYLVGANGNDLAP 567

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFINI 305
            +   R+    P +S +G+  +     D       +  ++   L++N  E++  +  +  
Sbjct: 568 LLQESRNAA-DPSWSPDGQSLVFGRINDAMGKENASRTLHIFHLKTNQMEQVPASDGL-F 625

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S  +SPD   I   +    + Q+ +        K +S    A   DPVW+     +   
Sbjct: 626 SPRWSPDGHYIA--ALTLDQRQVKLYDVADHTWKALSVPSGA---DPVWASDSRSLYVH 679


>gi|166365267|ref|YP_001657540.1| WD repeat-containing protein [Microcystis aeruginosa NIES-843]
 gi|166087640|dbj|BAG02348.1| WD-repeat protein Hat [Microcystis aeruginosa NIES-843]
          Length = 1108

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 115/267 (43%), Gaps = 22/267 (8%)

Query: 157 TISDDIYQS--ITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            I D I +   + G +G   S  +    + + +     ++ + ++ G NI+ LT      
Sbjct: 530 QILDRIQEKNQLQGHRGTIYSVSISPDRQKIATASQDGTVKIWNQKGENIQTLT-GHQGA 588

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++   FSP+ QK+A A+ D     +++ +     +      + +  + +  FS +G++ +
Sbjct: 589 VYSVSFSPDGQKIATASED--KTAKIWNLQ---GQNLVTYPDHQESVYSVSFSPDGQKIV 643

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +  +D+   ++++  Q+    +  +   I+  AS+SPD  +I   + R+G   + +   
Sbjct: 644 -TTSRDKTARLWNLSGQTLQVFK-GHKRSIDA-ASFSPDGQKIA-TASRDGT--IKIWDL 697

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNL 392
           +G     + Q+   +++   +SP G  IA    + +   I      G+           +
Sbjct: 698 SGKIILSLGQENIETFYSVNFSPDGQKIA-GAAADKTAKIW--DLQGNLIATFRGHQDFV 754

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +  +SP G+ +I +     D  +K++
Sbjct: 755 NSVNFSPDGQFIITASS---DGSAKIW 778



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 73/199 (36%), Gaps = 16/199 (8%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           + Y     +          +   ++   R  I +   S + ++   +  +D  + I+  +
Sbjct: 517 SKYPATSPIITLQQILDRIQEKNQLQGHRGTIYSVSISPDRQKIA-TASQDGTVKIW--N 573

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            +    + LT       S S+SPD  +I   S+    +   +    G +      D + S
Sbjct: 574 QKGENIQTLTGHQGAVYSVSFSPDGQKIATASE---DKTAKIWNLQGQNLV-TYPDHQES 629

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFS 407
            +   +SP G  I  T          +    G   ++      ++ A ++SP G+ +  +
Sbjct: 630 VYSVSFSPDGQKIVTTSRDKTA---RLWNLSGQTLQVFKGHKRSIDAASFSPDGQKIATA 686

Query: 408 RKKDGDTGSKLYSIDLNGR 426
            +   D   K++  DL+G+
Sbjct: 687 SR---DGTIKIW--DLSGK 700



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 61/343 (17%), Positives = 116/343 (33%), Gaps = 41/343 (11%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
           +S     QKI         + WN  G  ++         +    V F      D ++I+ 
Sbjct: 592 VSFSPDGQKIATASEDKTAKIWNLQGQNLV---TYPDHQESVYSVSFS----PDGQKIVT 644

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
                +   W     T+        + +   F+     ++ +   G IK    + D  G 
Sbjct: 645 TSRDKTARLWNLSGQTLQVFKGHKRSIDAASFSPDGQKIATASRDGTIK----IWDLSGK 700

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-- 259
            I  L     +  +   FSP+ QK+A A  D     +++ +          I  FR    
Sbjct: 701 IILSLGQENIETFYSVNFSPDGQKIAGAAAD--KTAKIWDLQGN------LIATFRGHQD 752

Query: 260 -ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            + +  FS +G+   I+   D +  I+   LQ      L        +A +S D  ++V 
Sbjct: 753 FVNSVNFSPDGQFI-ITASSDGSAKIWG--LQGEEITTLRGHQESVFTAVFSQDGKEVVT 809

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E   + Q N  +Q R+             + QG++IA     G    I ++  
Sbjct: 810 GSS---DETAKIWQLNNLNQARV------DNTSVSINSQGNIIAIANKDG---QITLLDS 857

Query: 379 DGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            G   R    +  ++ +  + P    +  + +       +++S
Sbjct: 858 QGKNIREFATKMRSIYSIAFHPDSNQMAITGRNG---KVQIWS 897



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 8/151 (5%)

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            N +  A  T   E  ++ + +     +         ++I    FS + ++   + +    
Sbjct: 919  NGEGTAIITGTSEGKVQYWHLSNYRPQLINSWTADDNIIYDLVFSPDHQKIATATR--GK 976

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            + I+  DLQ N  E +    F     S+SPD  +I   S R+G  +      +G + +  
Sbjct: 977  IKIW--DLQGNLFEEIKTDSFPVYGVSFSPDGEKIAAIS-RDGTAR--RWDRDG-NLRSE 1030

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             + +E   +   +SP    I      G+K  
Sbjct: 1031 FKIEEDIVYGITFSPDSREIVIIARDGQKHR 1061



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 88/233 (37%), Gaps = 31/233 (13%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                 + ++D  G NIR     + + ++   F P+  ++A    + +  ++++       
Sbjct: 847  NKDGQITLLDSQGKNIREFAT-KMRSIYSIAFHPDSNQMAITGRNGK--VQIWSQK---G 900

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS- 306
               +     +  I +  F+  G  A+I+   +  +  + +   SN   +L N+   + + 
Sbjct: 901  TMLQEFTASQVPIYSLAFNGEGT-AIITGTSEGKVQYWHL---SNYRPQLINSWTADDNI 956

Query: 307  ---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                 +SPD  +I   + R    ++ +    G+  + I  D     +   +SP G+ IA 
Sbjct: 957  IYDLVFSPDHQKIA-TATRG---KIKIWDLQGNLFEEIKTDSF-PVYGVSFSPDGEKIAA 1011

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKD 411
                G         +DG+    L  +  ++       T+SP  R ++   +  
Sbjct: 1012 ISRDGTARR---WDRDGN----LRSEFKIEEDIVYGITFSPDSREIVIIARDG 1057



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 11/93 (11%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSG 401
           Q    + +    SP    IA     G    + +  + G   + L      + + ++SP G
Sbjct: 542 QGHRGTIYSVSISPDRQKIATASQDGT---VKIWNQKGENIQTLTGHQGAVYSVSFSPDG 598

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           + +  + +   D  +K++  +L G+N  L+  P
Sbjct: 599 QKIATASE---DKTAKIW--NLQGQN--LVTYP 624


>gi|297526399|ref|YP_003668423.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Staphylothermus hellenicus DSM 12710]
 gi|297255315|gb|ADI31524.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Staphylothermus hellenicus DSM 12710]
          Length = 648

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 103/273 (37%), Gaps = 38/273 (13%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN--QQKVAYATYD 232
            ++ F   S+     +    +   D +   Y   ++  +   P   P+   +K+A+ +  
Sbjct: 23  DKVFFTLTSINMDKDRYETNIWVYDLSTNNYAPLTKGPMDQSPE--PDRRGEKIAFISRR 80

Query: 233 D-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           D     +    +Y++D +  R P+ +  F+  +   ++S +GK  L  + + E  +    
Sbjct: 81  DAESEKDRGNGIYILDLKYSREPRLVAWFKGGVRGVKWSPDGKYLLAIINEGEPEE---- 136

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                      +   I+    +  +    V+         L ++  +  + ++I+  K  
Sbjct: 137 -----------DVKHIDDMPIWF-NGVGFVYNM----SSHLIILDPDSGEYEKITSGK-I 179

Query: 348 SYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGR 402
                 WS  G  IA+     + +     + +      ++R+L+E+ +    PTWSP  +
Sbjct: 180 FVRSASWSNNGRYIAYILSKDRVNPYLSELHIYDLVEKKDRVLLENITTYFTPTWSPDDK 239

Query: 403 SLIFS---RKKDGDTGSKLYSIDLNGRNETLIN 432
            +      R++   T  K+Y I+ +   E  I 
Sbjct: 240 YIALIFHRRERGFSTHYKVYLINPDTGEEKCIT 272



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 83/234 (35%), Gaps = 47/234 (20%)

Query: 259 MILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           ++ +P  + NG +   ++            +I+  DL +N    LT    ++ S      
Sbjct: 12  IVSSPIITVNGDKVFFTLTSINMDKDRYETNIWVYDLSTNNYAPLTKGP-MDQSPEPDRR 70

Query: 313 SSQIVFESDRE------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +I F S R+          +Y++    S + R+    +       WSP G  +     
Sbjct: 71  GEKIAFISRRDAESEKDRGNGIYILDLKYSREPRLVAWFKGGVRGVKWSPDGKYLLAIIN 130

Query: 367 SGE------------------------KFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSG 401
            GE                           + ++  D  +   +      +++ +WS +G
Sbjct: 131 EGEPEEDVKHIDDMPIWFNGVGFVYNMSSHLIILDPDSGEYEKITSGKIFVRSASWSNNG 190

Query: 402 RSLIF--SRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGFM 446
           R + +  S+ +     S+L+  DL  + + ++        TP ++ D +++  +
Sbjct: 191 RYIAYILSKDRVNPYLSELHIYDLVEKKDRVLLENITTYFTPTWSPDDKYIALI 244


>gi|75909029|ref|YP_323325.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75702754|gb|ABA22430.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 1196

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 111/332 (33%), Gaps = 42/332 (12%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQI------IGKKFFSSPASWRKI---AHTISDDI----- 162
                        RLWDV+    +          F    +S R I   A   S  I     
Sbjct: 796  QTIATGSYDSSVRLWDVQQGTCVKIFHGHTSDVFSVIFSSDRHIVSAAQDFSVRIWNISK 855

Query: 163  ---YQSITGEK-GDFNSRILFVSESVV-----SGIIKNSLCVMDRDGANIRYLTPSRDQI 213
                +++ G   G F+     V  + V     +G +   + + D        +       
Sbjct: 856  GVCVRTLQGHSCGAFSVSFNSVCPTGVDCMLATGSMDGLVRLWDVASGYCTKILQGHTNW 915

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            ++   FSP+   +A  ++D      + L D         +      + +  FS +G+   
Sbjct: 916  VWSVSFSPDGSILASGSHDK----SIKLWDVISGHCITTLYGHNGGVTSVSFSPDGQTLA 971

Query: 274  ISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             S  +D+++ ++  D+      + L        S S+SPD + +   S       + +  
Sbjct: 972  -SASRDKSVKLW--DIHERKCVKTLEGHTGDIWSVSFSPDGNTLATAS---ADYLVKLWD 1025

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLV-EDS 390
             +               +   +SP G ++A         +I +      +  ++L    S
Sbjct: 1026 VDEGKCITTLPGHTDGVWSLSFSPDGKILATGSVD---HSIRLWDTSNFTCLKVLQGHTS 1082

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             + + ++SP+G +L  +     D   +L+ ++
Sbjct: 1083 TIWSVSFSPNGSTLASASS---DQTIRLWDMN 1111



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 87/245 (35%), Gaps = 30/245 (12%)

Query: 190 KNSLCVMDRDG-------ANIRYLTP--SRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +  L   D+DG       AN + L      + +++   FSP+ Q +A           + 
Sbjct: 585 RKLLATGDQDGQIHLWQMANRKNLLTFKGHECVVWTVAFSPDGQTLA----SGGHDGLIK 640

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L D +     K +     ++ + RFS +G+  + S   D ++ ++ +  +    + L   
Sbjct: 641 LWDVQTGNCLKTLAQHEGIVWSVRFSPDGQTLV-SGSLDASIRLWDI-RRGECLKILHGH 698

Query: 301 LFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                S  ++PD S +       G +   + +   N     ++ Q    +     +SP G
Sbjct: 699 TSGVCSVRFNPDGSILA-----SGSQDCDIRLWDLNTDKCIKVLQGHAGNVRAVCFSPDG 753

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGS 416
             +A +       ++ +                 +  +  +S  G+++        D+  
Sbjct: 754 KTLASSSSD---HSVRLWNVSKGTCIKTFHGHKNEVWSVCFSSDGQTIATGSY---DSSV 807

Query: 417 KLYSI 421
           +L+ +
Sbjct: 808 RLWDV 812



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 90/242 (37%), Gaps = 16/242 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG     + + D    N        + I++  RFSP+ Q +   + D      + L
Sbjct: 628 QTLASGGHDGLIKLWDVQTGNCLKTLAQHEGIVWSVRFSPDGQTLVSGSLD----ASIRL 683

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D R     K +    S + + RF+ +G   L S  +D  + ++ ++      + L    
Sbjct: 684 WDIRRGECLKILHGHTSGVCSVRFNPDG-SILASGSQDCDIRLWDLNTD-KCIKVLQGHA 741

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +  +SPD   +   S  +   +L+    +     +     +   +   +S  G  I
Sbjct: 742 GNVRAVCFSPDGKTLA-SSSSDHSVRLW--NVSKGTCIKTFHGHKNEVWSVCFSSDGQTI 798

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           A   +        V    G+  ++     S++ +  +S   R ++ + +   D   ++++
Sbjct: 799 ATGSYDSSVRLWDVQ--QGTCVKIFHGHTSDVFSVIFSSD-RHIVSAAQ---DFSVRIWN 852

Query: 421 ID 422
           I 
Sbjct: 853 IS 854



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 108/337 (32%), Gaps = 58/337 (17%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
              L    RLWD++  + +             KI H              G  + R    
Sbjct: 674 SGSLDASIRLWDIRRGECL-------------KILH----------GHTSGVCSVRFNPD 710

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
              + SG     + + D +      +       +    FSP+ + +A ++ D      V 
Sbjct: 711 GSILASGSQDCDIRLWDLNTDKCIKVLQGHAGNVRAVCFSPDGKTLASSSSDH----SVR 766

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L +       K     ++ + +  FSS+G+    +   D ++ ++  D+Q     ++ + 
Sbjct: 767 LWNVSKGTCIKTFHGHKNEVWSVCFSSDGQTIA-TGSYDSSVRLW--DVQQGTCVKIFHG 823

Query: 301 LFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
              ++   +S     ++F SDR          + +   +     R  Q      F   ++
Sbjct: 824 HTSDV---FS-----VIFSSDRHIVSAAQDFSVRIWNISKGVCVRTLQGHSCGAFSVSFN 875

Query: 356 ---PQG--DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSR 408
              P G   ++A     G    + +          +++       + ++SP G  L    
Sbjct: 876 SVCPTGVDCMLATGSMDG---LVRLWDVASGYCTKILQGHTNWVWSVSFSPDGSILASGS 932

Query: 409 KKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
               D   KL+ + ++G    TL       +   +  
Sbjct: 933 H---DKSIKLWDV-ISGHCITTLYGHNGGVTSVSFSP 965


>gi|281410841|gb|ADA68831.1| NWDp3 [Podospora anserina]
          Length = 210

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 77/206 (37%), Gaps = 12/206 (5%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+  ++  A+ D      + + + +  +  +++      + +  FS
Sbjct: 1   FEGHSGSVRSVAFSPDGSRIVSASNDQ----TIRIWEAKSGKEVRKLEGHSGSVRSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G R + S   D  + I+          +L        S ++SPDSS+IV  SD     
Sbjct: 57  PDGSRIV-SASDDGTIRIWEA-KSGKEVRKLEGHSNWVRSVAFSPDSSRIVSASD---DG 111

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + + ++    + R  +    S     +SP G  I  +  + +   I   K  G + R L
Sbjct: 112 TIRIWEAKSGKEVRKLEGHSGSVRSVAFSPDGSRIV-SASNDQTIRIWEAK-SGKEVRKL 169

Query: 387 -VEDSNLQAPTWSPSGRSLIFSRKKD 411
                 + +  +SP G  ++ +    
Sbjct: 170 EGHSGLVLSVAFSPDGSRIVSASNDQ 195



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 70/203 (34%), Gaps = 12/203 (5%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +VS     ++ + +                +    FSP+  ++  A+ D      + + 
Sbjct: 19  RIVSASNDQTIRIWEAKSGKEVRKLEGHSGSVRSVAFSPDGSRIVSASDDG----TIRIW 74

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +  +  +++    + + +  FS +  R + S   D  + I+          +L     
Sbjct: 75  EAKSGKEVRKLEGHSNWVRSVAFSPDSSRIV-SASDDGTIRIWEA-KSGKEVRKLEGHSG 132

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++SPD S+IV  S+    + + + ++    + R  +          +SP G  I 
Sbjct: 133 SVRSVAFSPDGSRIVSASN---DQTIRIWEAKSGKEVRKLEGHSGLVLSVAFSPDGSRIV 189

Query: 363 FTKFSGEKFAIGVMKKDGSQERL 385
                     I + +    +E  
Sbjct: 190 SASNDQT---IRIWEAKSGKEVR 209



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 86/226 (38%), Gaps = 35/226 (15%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           R++    D+     R+W+ K  K++  +K      S R +A   S D             
Sbjct: 19  RIVSASNDQ---TIRIWEAKSGKEV--RKLEGHSGSVRSVA--FSPD------------G 59

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           SRI+  S+         ++ + +                +    FSP+  ++  A+ D  
Sbjct: 60  SRIVSASDDG-------TIRIWEAKSGKEVRKLEGHSNWVRSVAFSPDSSRIVSASDDG- 111

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               + + + +  +  +++      + +  FS +G R + S   D+ + I+         
Sbjct: 112 ---TIRIWEAKSGKEVRKLEGHSGSVRSVAFSPDGSRIV-SASNDQTIRIWEA-KSGKEV 166

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            +L     + +S ++SPD S+IV  S+    + + + ++    + R
Sbjct: 167 RKLEGHSGLVLSVAFSPDGSRIVSASN---DQTIRIWEAKSGKEVR 209



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 49/146 (33%), Gaps = 9/146 (6%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S ++SPD S+IV  S+    + + + ++    + R  +    S     +SP G 
Sbjct: 4   HSGSVRSVAFSPDGSRIVSASN---DQTIRIWEAKSGKEVRKLEGHSGSVRSVAFSPDGS 60

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKL 418
            I  +        I   K  G + R L   SN  ++  +SP    ++ +     D   ++
Sbjct: 61  RIV-SASDDGTIRIWEAK-SGKEVRKLEGHSNWVRSVAFSPDSSRIVSASD---DGTIRI 115

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +          L           +  
Sbjct: 116 WEAKSGKEVRKLEGHSGSVRSVAFSP 141


>gi|196247878|ref|ZP_03146580.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. G11MC16]
 gi|196212662|gb|EDY07419.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geobacillus sp. G11MC16]
          Length = 672

 Score = 97.0 bits (240), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 81/237 (34%), Gaps = 52/237 (21%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIY----SVDLQSNATERLTNTLFINISASYSPDSS 314
            +  P ++S+G   +   +  +    Y     +  +  A  + T   + +    +SPDS 
Sbjct: 22  SVRDPHYASDGTHGVFVQKSIDEEKQYCSHLYIWTEDGAVRQWTFGRWRDTRPRFSPDSK 81

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI- 373
            I F SDR G  QL+++ ++G + ++++  K     D VW+P G  +      G+   I 
Sbjct: 82  TIAFLSDRSGHTQLWLLPADGGEARQLTFFKNG-VRDYVWAPDGTFLIALTTLGDNETID 140

Query: 374 -----------------------------------------GVMKKDGSQERLLVEDSNL 392
                                                     +    G  E L   +  +
Sbjct: 141 DREEPKKKETKPADLKPHVVERLYYKSDASGFLDGKQAVLVRIDATSGKTEALTSREEEI 200

Query: 393 QAPTWSPSGRSLIFSRKKDGD----TGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
            +   SP+GR+L F   ++ D        +  +DL  + ET L       +   W  
Sbjct: 201 GSFAISPNGRTLAFVANRNEDPDTTFTRDIVLLDLESKAETNLTKGSGTFTSLAWSP 257



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/276 (14%), Positives = 83/276 (30%), Gaps = 54/276 (19%)

Query: 210 RDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           R + + +P ++ +     +   + D+E     +L     D A ++    R     PRFS 
Sbjct: 19  RLRSVRDPHYASDGTHGVFVQKSIDEEKQYCSHLYIWTEDGAVRQWTFGRWRDTRPRFSP 78

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS------------- 314
           + K       +     ++ +        +LT          ++PD +             
Sbjct: 79  DSKTIAFLSDRSGHTQLWLLPADGGEARQLTFFKNGVRDYVWAPDGTFLIALTTLGDNET 138

Query: 315 -----------------------QIVFESDREG-----KEQLYVMQSNGSDQKRISQDKE 346
                                  ++ ++SD  G     +  L  + +     + ++  +E
Sbjct: 139 IDDREEPKKKETKPADLKPHVVERLYYKSDASGFLDGKQAVLVRIDATSGKTEALTSREE 198

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
                   SP G  +AF     E         I ++  +   E  L +      +  WSP
Sbjct: 199 -EIGSFAISPNGRTLAFVANRNEDPDTTFTRDIVLLDLESKAETNLTKGSGTFTSLAWSP 257

Query: 400 SGRSLIFSRK---KDGDTGSKLYSIDLNGRNETLIN 432
            G  L          G T  +LY  +     + ++ 
Sbjct: 258 DGTKLAAIGHDLAYLGATIHQLYVFEPERGTKRVLT 293



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 93/309 (30%), Gaps = 66/309 (21%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-------------------- 227
                L ++  DG   R LT  ++ +     ++P+   +                     
Sbjct: 90  SGHTQLWLLPADGGEARQLTFFKNGVRDY-VWAPDGTFLIALTTLGDNETIDDREEPKKK 148

Query: 228 ---------------YATYDDEDILR----VYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                          Y   D    L     V +         + + +    I +   S N
Sbjct: 149 ETKPADLKPHVVERLYYKSDASGFLDGKQAVLVRIDATSGKTEALTSREEEIGSFAISPN 208

Query: 269 GKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           G+       ++E  D      I  +DL+S A   LT       S ++SPD +++      
Sbjct: 209 GRTLAFVANRNEDPDTTFTRDIVLLDLESKAETNLTKGSGTFTSLAWSPDGTKLAAIGHD 268

Query: 323 EGK-----EQLYVMQSNGSDQKRISQDKEASYFD--------------PVWSPQGDLIAF 363
                    QLYV +     ++ ++ D +    D              P+W   G  +  
Sbjct: 269 LAYLGATIHQLYVFEPERGTKRVLTADWDVHLGDAMVGDTHADAKGPGPIWKRDGTGLYV 328

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           T     +  +  +  DG    ++  D ++      P+ +    +   +      LY+I L
Sbjct: 329 TASQRGRVNVYFVPLDGPIVPIIEGDFHVYGLAIHPNEQQ-AVAAISEPTMIGDLYTISL 387

Query: 424 NGRNETLIN 432
               +T + 
Sbjct: 388 ESGAKTRLT 396


>gi|186684904|ref|YP_001868100.1| hypothetical protein Npun_F4808 [Nostoc punctiforme PCC 73102]
 gi|186467356|gb|ACC83157.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1683

 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 60/392 (15%), Positives = 128/392 (32%), Gaps = 60/392 (15%)

Query: 50   IAFTKFVSIDELGGKVSEVVSK-----DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWN 104
            IA   + +  +    + + +       +L+ S +    S+  F         +   + W 
Sbjct: 962  IAALWWQADLQKTAAIHQTLRAERSETNLRISGI-TAASEALFASNKEFDALLESLRAWR 1020

Query: 105  SLG-AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
             L  A  +       +   R+RV   L           +  +      R   HT  D ++
Sbjct: 1021 ELKQADGV-------QPDTRMRVVTAL----------QQAVYGVTEVNRLEGHT--DIVW 1061

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                   G          +++ SG    ++ +   DG  ++ L    D +     FSP+ 
Sbjct: 1062 GVTFSPDG----------QTLASGSRDRTVKIWHPDGTLLQTLKGHTDAVTSV-SFSPDG 1110

Query: 224  QKVAYATYDDEDILRVYLMDTRID----RAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            Q +A A+ D    ++++  +        +  K +   +  + +  FS +G+    +  KD
Sbjct: 1111 QTLASASLD--KTVQIWNKNPITGEFDLKPYKTLRGHKDWVYSVNFSPDGELLA-TASKD 1167

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              + ++  D      + L          ++SPD   I   SD    + + + + +GS   
Sbjct: 1168 TTIKLWRKD--GTLVKILRGHRGWVNWVNFSPDGQLIASSSD---DKTVKIWRRDGSLVT 1222

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-------ERLLVEDSNL 392
             + Q  +      V+SP G  +A                +          + L    S +
Sbjct: 1223 TL-QGHQQGVTVAVFSPDGKFLASAGRDKTVKLWRRENNNTKDSFDFRLYKNLRQHSSTV 1281

Query: 393  QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             + ++S   + L        D    L+S+   
Sbjct: 1282 WSVSFSSDSKKLA---SAGEDNTINLWSVTGT 1310



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 61/371 (16%), Positives = 129/371 (34%), Gaps = 59/371 (15%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLG---------AQVLVTGRVIKE----GKDRLRVEF 128
            +S  S  +K+ +         W+  G         +  +VT                   
Sbjct: 1284 VSFSSDSKKLASAGEDNTINLWSVTGTLLKTFKGHSDAVVTIAFSPNNKLLASGSFDKSV 1343

Query: 129  RLWDVK--DRKQIIGKKFFSSPASW----RKIAHTISDDIYQ--SITGEKGDFNSRILFV 180
            +LW +       + G +      +W    + +A   SD   +        G+F +R+   
Sbjct: 1344 KLWSLNAPTPPTLQGHQDRVLSVTWSPNGQMLASGSSDRTVKLWKKYTSNGEFKTRLYKT 1403

Query: 181  SESV----------------VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                                 SG    ++ +   DG  I  L   RD ++    FSP+ Q
Sbjct: 1404 LVGHTSKVPSVSFDPKGKMLASGSYDKTVKLWRLDGTLIMTLHGHRDSVMSV-NFSPDGQ 1462

Query: 225  KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
             +A A+ D      V L + R  +  K +   +  + +  FS +  + L S   D+ + +
Sbjct: 1463 FLASASKDK----TVKLWN-RQGKLLKTLMGHQGWVNSVNFSPD-SQILASASDDQTVKL 1516

Query: 285  YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
            +  + +    +  +      +  S+SP    +   S       + + + +G+  K + + 
Sbjct: 1517 W--NREGKLLKTFSPHDSWVLGVSFSPTDELLASAS---WDNTVKLWRRDGTLLKTLLKG 1571

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPS 400
               S     +SP G+L+A   +         +K    + +L+   +  +AP    ++SP 
Sbjct: 1572 YSDSVNAVTFSPNGELLAAASWDS------TVKLWSHEGKLIKSLNGHRAPVLSVSFSPD 1625

Query: 401  GRSLIFSRKKD 411
            G++L  +   +
Sbjct: 1626 GQTLASASDDN 1636


>gi|319902329|ref|YP_004162057.1| WD40-like beta Propeller containing protein [Bacteroides helcogenes
           P 36-108]
 gi|319417360|gb|ADV44471.1| WD40-like beta Propeller containing protein [Bacteroides helcogenes
           P 36-108]
          Length = 716

 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 54/320 (16%), Positives = 116/320 (36%), Gaps = 72/320 (22%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV      N + VM+ DG + R +T +  Q   +P +  + +K+A+   +     +++ 
Sbjct: 76  YSVPENKSNNEIFVMNADGGSNRQITRNVWQ-ESQPVWIKDGKKIAFLCNESGSS-QIWE 133

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------------------------ 277
           M++      +++  + + I    FS +GK+ L   Q                        
Sbjct: 134 MNSD-GTERRQLTQYDNDIEGFSFSPDGKKILFITQVKTVKSTADKYPDLPKATGILVTD 192

Query: 278 ---------KDEAMDIYSVDLQSNATERLTNTLFI-NISA--------------SYSPDS 313
                       A   +  D   NA   ++N   I +                 ++SP S
Sbjct: 193 LMYKHWDEWVTTAPHPFIADFDGNA---ISNVQDILDDEPYESPMKPWGGIEQLAWSPSS 249

Query: 314 SQIVFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            ++ +                 +Y+        K I+++ +    +P +SP G  IA+  
Sbjct: 250 DKVAYTCRKKTGLAYAVSTNSDIYIYDLATKQTKNITEENKGYDINPQYSPDGKYIAWQS 309

Query: 366 FSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              + +      + +M  +  ++R + +  +SN+ A  W+    S+ F     G+T  ++
Sbjct: 310 MERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFLWNKDSGSIYFIGVWHGET--QI 367

Query: 419 YSIDL-NGRNETLINTPAYA 437
           Y+I+L +    T +    Y 
Sbjct: 368 YNINLADSDRLTQLTDGMYD 387



 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 88/247 (35%), Gaps = 61/247 (24%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S + K+   SV      +     +I+ ++    +  ++T  ++      +  
Sbjct: 55  GRIGNVTVSPDEKQIAYSVAYYSVPENKSNNEIFVMNADGGSNRQITRNVWQESQPVWIK 114

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
           D  +I F  +  G  Q++ M S+G+++++++Q  +       +SP G  I F        
Sbjct: 115 DGKKIAFLCNESGSSQIWEMNSDGTERRQLTQY-DNDIEGFSFSPDGKKILFITQVKTVK 173

Query: 367 -SGEKF---------------------------AIGVMKKDG---SQERLLVEDSNLQAP 395
            + +K+                              +   DG   S  + +++D   ++P
Sbjct: 174 STADKYPDLPKATGILVTDLMYKHWDEWVTTAPHPFIADFDGNAISNVQDILDDEPYESP 233

Query: 396 ----------TWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLIN--TPAYA 437
                      WSPS   + ++ RKK G      T S +Y  DL  +    I      Y 
Sbjct: 234 MKPWGGIEQLAWSPSSDKVAYTCRKKTGLAYAVSTNSDIYIYDLATKQTKNITEENKGYD 293

Query: 438 SDPQWVG 444
            +PQ+  
Sbjct: 294 INPQYSP 300



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 96/277 (34%), Gaps = 63/277 (22%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+++++AY+       +++    +++M+       ++I         P +  +GK+ 
Sbjct: 61  TVSPDEKQIAYSVAYYSVPENKSNNEIFVMNADGGSN-RQITRNVWQESQPVWIKDGKKI 119

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---------ESDR- 322
                +  +  I+ ++       +LT         S+SPD  +I+F          +D+ 
Sbjct: 120 AFLCNESGSSQIWEMNSDGTERRQLTQYDNDIEGFSFSPDGKKILFITQVKTVKSTADKY 179

Query: 323 -----------------------EGKEQLYVMQSNG---SDQKRISQDKE--------AS 348
                                        ++   +G   S+ + I  D+           
Sbjct: 180 PDLPKATGILVTDLMYKHWDEWVTTAPHPFIADFDGNAISNVQDILDDEPYESPMKPWGG 239

Query: 349 YFDPVWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWS 398
                WSP  D +A+T                I +      Q + + E+       P +S
Sbjct: 240 IEQLAWSPSSDKVAYTCRKKTGLAYAVSTNSDIYIYDLATKQTKNITEENKGYDINPQYS 299

Query: 399 PSGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLIN 432
           P G+ + + S ++DG     ++L+ ++L    +  ++
Sbjct: 300 PDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVS 336



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 105/295 (35%), Gaps = 61/295 (20%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------DD 233
           +    + +  M+ DG   R LT   + I     FSP+ +K+ + T             D 
Sbjct: 124 NESGSSQIWEMNSDGTERRQLTQYDNDIEGF-SFSPDGKKILFITQVKTVKSTADKYPDL 182

Query: 234 EDILRVYLMDTRIDRAPKRIG--------NFRSMILA----------------P------ 263
                + + D       + +         +F    ++                P      
Sbjct: 183 PKATGILVTDLMYKHWDEWVTTAPHPFIADFDGNAISNVQDILDDEPYESPMKPWGGIEQ 242

Query: 264 -RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLFINISASYSPDS 313
             +S +  +   + +K            DIY  DL +  T+ +T      +I+  YSPD 
Sbjct: 243 LAWSPSSDKVAYTCRKKTGLAYAVSTNSDIYIYDLATKQTKNITEENKGYDINPQYSPDG 302

Query: 314 SQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             I ++S +R+G      +L++M     +++ +S+  E++    +W+     I F     
Sbjct: 303 KYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFLWNKDSGSIYFIGVWH 362

Query: 369 EKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +  I  +   D  +   L  D      + +  G  +I +++     G ++Y+++
Sbjct: 363 GETQIYNINLADSDRLTQLT-DGMYDYASLALCGDKVI-AKRHSMSMGDEIYAVN 415



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 80/214 (37%), Gaps = 27/214 (12%)

Query: 194 CVMDRDG---ANIRYLTPSRD-QILFEP-------RFSPNQQKVAYA-------TYDDED 235
            + D DG   +N++ +      +   +P        +SP+  KVAY         Y    
Sbjct: 209 FIADFDGNAISNVQDILDDEPYESPMKPWGGIEQLAWSPSSDKVAYTCRKKTGLAYAVST 268

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEA----MDIYSVDLQ 290
              +Y+ D    +        +   + P++S +GK     S+++D        ++ ++L+
Sbjct: 269 NSDIYIYDLATKQTKNITEENKGYDINPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLE 328

Query: 291 SNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +     ++     N+ A  ++ DS  I F     G+ Q+Y +    SD  R++Q  +  Y
Sbjct: 329 TGEKRFVSKAFESNVDAFLWNKDSGSIYFIGVWHGETQIYNINLADSD--RLTQLTDGMY 386

Query: 350 FDPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQ 382
                +  GD  IA          I  +    S 
Sbjct: 387 DYASLALCGDKVIAKRHSMSMGDEIYAVNNARSG 420


>gi|307354079|ref|YP_003895130.1| hypothetical protein Mpet_1941 [Methanoplanus petrolearius DSM
           11571]
 gi|307157312|gb|ADN36692.1| hypothetical protein Mpet_1941 [Methanoplanus petrolearius DSM
           11571]
          Length = 447

 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 30/244 (12%), Positives = 100/244 (40%), Gaps = 35/244 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-----------------D 235
             ++ +DG+N ++L       +    +SP+   +AY +                      
Sbjct: 143 YWLVAKDGSNQQFLFNDS---VLSYSWSPDGSNIAYLSKVKGICLEKNVDGTCNYEQNAY 199

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD----EAMDIYSVDLQS 291
           +L+++ + T + R   ++ + + +  + +++ +GK  +   Q++        +  V++++
Sbjct: 200 VLKIFNLSTSLSRELNQVSDPQWIQQSIKWTEDGKEVVFLSQENRTSYGQYLLVRVNVET 259

Query: 292 NATERL---TNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKE 346
                +   T++ +     +++P S    + ++        + ++         ++++  
Sbjct: 260 GQVNEIPVVTDSDYRVSMVAWNPCSDIFAYLTNTSFNNTNLVRIVDPIEGTDIPLTKEGY 319

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +     W+P G  + ++        I V+  DG+    L  + ++++ +W P+G  ++F
Sbjct: 320 HTLL--SWNPDGTRLGYSYHGD----IWVINPDGTDVTRLTMNGSIRSFSWQPNGSCIVF 373

Query: 407 SRKK 410
           +  +
Sbjct: 374 NENE 377



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 98/285 (34%), Gaps = 44/285 (15%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-----YATYDDEDILRVYLMDTRID 247
           L +M+ DG++ R L  S   +L  P ++P    +      Y         + Y +  +  
Sbjct: 93  LNIMNSDGSDRRIL--SNLTVLSVPSWNPQGTHLLILGGEYTDSFQNPENKGYWLVAKDG 150

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----------------AMDIYSVDLQS 291
              + +  F   +L+  +S +G       +                   A  +   +L +
Sbjct: 151 SNQQFL--FNDSVLSYSWSPDGSNIAYLSKVKGICLEKNVDGTCNYEQNAYVLKIFNLST 208

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRI--S 342
                  ++++  +I  S  ++ D  ++VF S       G+  L  +         I   
Sbjct: 209 SLSRELNQVSDPQWIQQSIKWTEDGKEVVFLSQENRTSYGQYLLVRVNVETGQVNEIPVV 268

Query: 343 QDKEASYFDPVWSPQGDLIAF---TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            D +       W+P  D+ A+   T F+     + ++      +  L ++      +W+P
Sbjct: 269 TDSDYRVSMVAWNPCSDIFAYLTNTSFNNTNL-VRIVDPIEGTDIPLTKEGYHTLLSWNP 327

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            G  L +S    GD    ++ I+ +G + T +          W  
Sbjct: 328 DGTRLGYS--YHGD----IWVINPDGTDVTRLTMNGSIRSFSWQP 366



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 70/179 (39%), Gaps = 36/179 (20%)

Query: 298 TNTLFINISASYSPDSSQIVFE---------------SDREGKEQLYVMQSNGSDQKRIS 342
           TNT     S  +S D  +I F                   EG   L +M S+GSD++ +S
Sbjct: 48  TNTGESCNSPGWSLDGCEIAFVCRKWKEPCNCTSLWEGCVEGPALLNIMNSDGSDRRILS 107

Query: 343 QDKEASYFDPVWSPQGDLIAF-------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                    P W+PQG  +         +  + E     ++ KDGS ++ L  DS + + 
Sbjct: 108 NLTV--LSVPSWNPQGTHLLILGGEYTDSFQNPENKGYWLVAKDGSNQQFLFNDS-VLSY 164

Query: 396 TWSPSGRSLIFSRKKDG-----------DTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           +WSP G ++ +  K  G           +     Y + +   + +L       SDPQW+
Sbjct: 165 SWSPDGSNIAYLSKVKGICLEKNVDGTCNYEQNAYVLKIFNLSTSLSRELNQVSDPQWI 223



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 25/131 (19%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFS---------------GEKFAIGVMKKDGSQERL 385
           I  +   S   P WS  G  IAF                        + +M  DGS  R+
Sbjct: 46  IMTNTGESCNSPGWSLDGCEIAFVCRKWKEPCNCTSLWEGCVEGPALLNIMNSDGSDRRI 105

Query: 386 LVEDSNLQAPTWSPSGRSLI-----FSRKKDGDTGSKLYSIDLNGRNETLINTP-----A 435
           L   + L  P+W+P G  L+     ++           + +  +G N+  +        +
Sbjct: 106 LSNLTVLSVPSWNPQGTHLLILGGEYTDSFQNPENKGYWLVAKDGSNQQFLFNDSVLSYS 165

Query: 436 YASDPQWVGFM 446
           ++ D   + ++
Sbjct: 166 WSPDGSNIAYL 176


>gi|15791110|ref|NP_280934.1| acylaminoacyl-peptidase [Halobacterium sp. NRC-1]
 gi|169236863|ref|YP_001690063.1| acylaminoacyl-peptidase [Halobacterium salinarum R1]
 gi|10581715|gb|AAG20414.1| acylaminoacyl-peptidase [Halobacterium sp. NRC-1]
 gi|167727929|emb|CAP14717.1| putative acylaminoacyl-peptidase [Halobacterium salinarum R1]
          Length = 674

 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 75/200 (37%), Gaps = 31/200 (15%)

Query: 263 PRFSSNGKRALI---SVQKDE-----AMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           P  S  G R      + ++D         ++   +    + R T     +   ++SP   
Sbjct: 18  PAVSPTGDRVAYVRTTAERDGDTGQETASVHVAPVGGGGSRRFTAADGTDAEPAWSPTGD 77

Query: 315 QIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           ++ F S R     G+ QL+V+  +G +  RI+ D      +  W P GD +AF +     
Sbjct: 78  RLAFVSTRGDAGGGRPQLWVVPVDGGEATRIT-DVIGGVSNIAWGPDGDRVAFLQ----- 131

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---IF---SRKKDGDTGSKLYSIDL- 423
               V   + ++E     D   +  T  P  R +   ++   +  +DG     +Y  DL 
Sbjct: 132 ---AVRPAERAEELDREHDGEYERDT--PDPRVIDRQMYRGHTSYRDGAR-RHVYVADLA 185

Query: 424 NGRNETLINTPAYASDPQWV 443
            GR + +    A    P W 
Sbjct: 186 AGRVDRVTAGVAECGGPAWG 205



 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 83/299 (27%), Gaps = 71/299 (23%)

Query: 214 LFEPRFSPNQQKVAYATY------DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           L +P  SP   +VAY         D         +        +R          P +S 
Sbjct: 15  LSQPAVSPTGDRVAYVRTTAERDGDTGQETASVHVAPVGGGGSRRFTAADGTDAEPAWSP 74

Query: 268 NGKRALISVQK----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF----- 318
            G R      +         ++ V +      R+T+ +    + ++ PD  ++ F     
Sbjct: 75  TGDRLAFVSTRGDAGGGRPQLWVVPVDGGEATRITDVIGGVSNIAWGPDGDRVAFLQAVR 134

Query: 319 ----------------------------------ESDREG-KEQLYVMQSNGSDQKRISQ 343
                                              S R+G +  +YV         R++ 
Sbjct: 135 PAERAEELDREHDGEYERDTPDPRVIDRQMYRGHTSYRDGARRHVYVADLAAGRVDRVT- 193

Query: 344 DKEASYFDPVWSPQGDLIAFTKF-----SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
              A    P W   G L    +         ++AI       S +  +V       PT +
Sbjct: 194 AGVAECGGPAWGDDGTLYYPIRRGLDADDRLEWAIEAATPADSADSTVVTTVEGMGPTLA 253

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDL----NGRNETLIN---------TPAYASDPQWVG 444
             G  + ++     D      ++++     G  + L +         T  +A  P+W  
Sbjct: 254 VHGSRVAYTTTPADDPTLTQTAVEVFDRDTGATDRLTDGVDRTVAERTAGHA--PEWGP 310



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/319 (14%), Positives = 96/319 (30%), Gaps = 63/319 (19%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY------ 228
            R+ FVS    +G  +  L V+  DG     +T     +     + P+  +VA+      
Sbjct: 77  DRLAFVSTRGDAGGGRPQLWVVPVDGGEATRITDVIGGV-SNIAWGPDGDRVAFLQAVRP 135

Query: 229 ---------------------------------ATYDDEDILRVYLMDTRIDRAPKRIGN 255
                                             +Y D     VY+ D    R   R+  
Sbjct: 136 AERAEELDREHDGEYERDTPDPRVIDRQMYRGHTSYRDGARRHVYVADLAAGR-VDRVTA 194

Query: 256 FRSMILAPRFSSNG------KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +    P +  +G      +R L +  + E     +    S  +  +T      +  + 
Sbjct: 195 GVAECGGPAWGDDGTLYYPIRRGLDADDRLEWAIEAATPADSADSTVVTTVEG--MGPTL 252

Query: 310 SPDSSQIVFESDREGKEQLY-----VMQSNGSDQKRISQDKEASY------FDPVWSPQG 358
           +   S++ + +       L      V   +     R++   + +         P W P G
Sbjct: 253 AVHGSRVAYTTTPADDPTLTQTAVEVFDRDTGATDRLTDGVDRTVAERTAGHAPEWGPDG 312

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           + +         + +  +  D   +R +L  D ++ A + S    ++   + +    G  
Sbjct: 313 EHLYVCTPDEGGYVLRRVAADTGDDRVVLAGDRHVHAFSVSAD--AVAVVQSEWDHPGEV 370

Query: 418 LYSIDLNGRNETLINTPAY 436
           + +  + G   TL      
Sbjct: 371 VAATPMGGEEVTLTRANRD 389



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/329 (13%), Positives = 94/329 (28%), Gaps = 72/329 (21%)

Query: 175 SRILFVSES----VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            R+ +V  +      +G    S+ V    G   R  T   D    EP +SP   ++A+ +
Sbjct: 25  DRVAYVRTTAERDGDTGQETASVHVAPVGGGGSRRFTA-ADGTDAEPAWSPTGDRLAFVS 83

Query: 231 Y--DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-------------- 274
              D         +         RI +    +    +  +G R                 
Sbjct: 84  TRGDAGGGRPQLWVVPVDGGEATRITDVIGGVSNIAWGPDGDRVAFLQAVRPAERAEELD 143

Query: 275 --------------------------SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                                     S +      +Y  DL +   +R+T  +      +
Sbjct: 144 REHDGEYERDTPDPRVIDRQMYRGHTSYRDGARRHVYVADLAAGRVDRVTAGVAECGGPA 203

Query: 309 YSPDSSQIVF-------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +  D + + +         DR          ++ +D   ++  +      P  +  G  +
Sbjct: 204 WGDDGT-LYYPIRRGLDADDRLEWAIEAATPADSADSTVVTTVEG---MGPTLAVHGSRV 259

Query: 362 AFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNL--------QAPTWSPSGRSLIFSR 408
           A+T    +     + A+ V  +D      L +  +          AP W P G  L    
Sbjct: 260 AYTTTPADDPTLTQTAVEVFDRDTGATDRLTDGVDRTVAERTAGHAPEWGPDGEHLYVCT 319

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             +G    +  + D  G +  ++    + 
Sbjct: 320 PDEGGYVLRRVAAD-TGDDRVVLAGDRHV 347



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 12/110 (10%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLV-EDSNLQAPTW 397
           A    P  SP GD +A+ + + E+         ++ V    G   R     D     P W
Sbjct: 13  ARLSQPAVSPTGDRVAYVRTTAERDGDTGQETASVHVAPVGGGGSRRFTAADGTDAEPAW 72

Query: 398 SPSGRSLIFSRKKD--GDTGSKLYSIDLNGRNETLINTP-AYASDPQWVG 444
           SP+G  L F   +   G    +L+ + ++G   T I       S+  W  
Sbjct: 73  SPTGDRLAFVSTRGDAGGGRPQLWVVPVDGGEATRITDVIGGVSNIAWGP 122


>gi|149189986|ref|ZP_01868264.1| hypothetical protein VSAK1_25615 [Vibrio shilonii AK1]
 gi|148836152|gb|EDL53111.1| hypothetical protein VSAK1_25615 [Vibrio shilonii AK1]
          Length = 1071

 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 78/245 (31%), Gaps = 38/245 (15%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T        +   SP   ++A+             +          + +       P +S
Sbjct: 26  TSDGSSWYRDIAISPAGDQIAFTYSGQ------VWVANAKGGDAVPLTSEMVYSSNPVWS 79

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK- 325
            +G+       +    D++ +++ ++ ++RLT     +I  S+S D SQ++F+S R G  
Sbjct: 80  PDGQSLAYQSNQYGRGDVFVLNMNTHKSQRLTFHGSKDIPYSFSADGSQVLFQSFRIGNG 139

Query: 326 ------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--------- 364
                        +LY + + G  ++ +    E S      S  G    +T         
Sbjct: 140 DSELNNGFFGRSYRLYTVPAKGGREQVLL---ENSVSSYSVSHDGSQALYTDLPSYTEQQ 196

Query: 365 ----KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                 S     I        +   L       +   WS   +S+ F  ++ G     ++
Sbjct: 197 WRKGAQSDAARDIWKYDAKTHKHTQLTTFRGEDRNAVWSEDNQSMYFLSERSGSF--NIW 254

Query: 420 SIDLN 424
              L 
Sbjct: 255 KQSLT 259



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 90/254 (35%), Gaps = 41/254 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP   +VA     +     V+++ T    A +R+ N         FSS+G   L   +
Sbjct: 334 AVSPTAPEVAVVARGE-----VFVISTLTGEA-RRLTNTPQAERDISFSSDGMTLLYGSE 387

Query: 278 KDEAMDIYS----------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +    D+++          +       ++LT+T         S D ++I +   RE +  
Sbjct: 388 RAGNWDLFASHIGDHDKSFLTASQITEQQLTDTPVDETQPVLSHDDTRIAY---RESRNT 444

Query: 328 LYVMQSNGSDQKRISQDK-----EASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKD 379
           L VM      +  +   +     E S +   WSP    I      G       I ++   
Sbjct: 445 LKVMTIEDGAKTTLLNSQSMYSYEDSDWRYQWSPDDQYIV--SRDGSTLSANNIVLLDSK 502

Query: 380 GSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDG-------DTGSKLYSIDLNGRNETL 430
           G  + +          AP +S  G+ + ++  KDG            +Y++ LN + E  
Sbjct: 503 GENKPITLSYSGFVQSAPKFSDDGQVVYWTSDKDGLTELDGSTVNGDVYAVTLNKKTEAN 562

Query: 431 INTPAYASDPQWVG 444
           ++    + D  W+ 
Sbjct: 563 LDL---SQDQAWLA 573



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 96/283 (33%), Gaps = 37/283 (13%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
              QI  ++   +P           D+    ++ +    ++RI +          +N+L 
Sbjct: 408 TASQITEQQLTDTP----------VDETQPVLSHD----DTRIAYRES-------RNTLK 446

Query: 195 VMDR-DGA-----NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           VM   DGA     N + +    D   +  ++SP+ Q +            + L+D++ + 
Sbjct: 447 VMTIEDGAKTTLLNSQSMYSYEDS-DWRYQWSPDDQYIVSRDGSTLSANNIVLLDSKGEN 505

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFINIS 306
            P  +     +  AP+FS +G+    +  KD   +   +D  +       +T       +
Sbjct: 506 KPITLSYSGFVQSAPKFSDDGQVVYWTSDKDGLTE---LDGSTVNGDVYAVTLNKKTEAN 562

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFT 364
              S D + +  + +         +      Q RI +    S        SP    +   
Sbjct: 563 LDLSQDQAWLAEQEEHAAAPNHKTLIDVNDLQDRIQRLTPYSMSVLASYLSPDNTEMVVA 622

Query: 365 KFSGEKFA-IGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLI 405
              G+    + +    G  E +    ++  QA T +P    L+
Sbjct: 623 NQRGDDIEFVHLNLLTGDHEVMFTRSADDIQAITVTPDRTMLM 665


>gi|317148732|ref|XP_001822829.2| NACHT and WD40 domain protein [Aspergillus oryzae RIB40]
          Length = 1596

 Score = 97.0 bits (240), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 80/223 (35%), Gaps = 16/223 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D     ++         +    FSP+ + +A ++YD+     V L D  
Sbjct: 767 SGSDDKTVRLWDPATGALQQTLKGHIDWVETVAFSPDGRLLASSSYDN----TVRLWDPA 822

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                + +      ++   FS +G+    S   D+ + ++  D  +   ++ L     + 
Sbjct: 823 TGTLQQTLEGHTCSVVPVAFSPDGRLLA-SCSSDKTVRLW--DPATGTLQQTLEGHTDLV 879

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPD   +   S     + + +        ++  +          +SP G L+A +
Sbjct: 880 NSVAFSPDGRLLASGSR---DKIIRLWDPATGALQQTLKGHTGWVESVAFSPDGRLLASS 936

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
                   + +        +  +E      ++  +SP GR L 
Sbjct: 937 SDDNT---VRLWDPATGTLQQTLEGHTDPVESVAFSPDGRLLA 976



 Score = 96.6 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 83/262 (31%), Gaps = 19/262 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D     ++         +    FSP+ + +A ++YD+     V L D  
Sbjct: 977  SGSSDKTVRLWDPATGALQQTLKGHIDWVETVAFSPDGRLLASSSYDN----TVRLWDPA 1032

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                 + +      +    FS +G+    S   D  + ++  D  +   ++ L       
Sbjct: 1033 TGTLQQTLKGHTGWVETVAFSPDGRLLA-SSSDDNTVRLW--DPATGTLQQTLKGHTDPV 1089

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S  +SPD   +   SD      + +        ++  +         V+SP G L+   
Sbjct: 1090 NSMVFSPDGRLLASGSD---DNTVRLWDPVTGTLQQTLEGHTGWVKTMVFSPDGRLLVSG 1146

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    + +        +  ++       +  +SP GR L        D   +L+   
Sbjct: 1147 SDDNT---VRLWDPVTGTLQQTLKGHTDPVNSMVFSPDGRLLASGSD---DNTVRLWDPV 1200

Query: 423  LNGRNETLINTPAYASDPQWVG 444
                 +TL     +     +  
Sbjct: 1201 TGTLQQTLEGHTGWVKTVAFSP 1222



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 102/321 (31%), Gaps = 39/321 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDR---KQIIG-----KKFFSSPASWRKIAHTISDDIYQS 165
            GR++  G     V  RLWD       + + G     +    SP   R +A +  D+  + 
Sbjct: 972  GRLLASGSSDKTV--RLWDPATGALQQTLKGHIDWVETVAFSPDG-RLLASSSYDNTVRL 1028

Query: 166  ITGEKG----------DFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
                 G           +   + F  +     S    N++ + D     ++         
Sbjct: 1029 WDPATGTLQQTLKGHTGWVETVAFSPDGRLLASSSDDNTVRLWDPATGTLQQTLKGHTDP 1088

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +    FSP+ + +A  + D+     V L D       + +      +    FS +G R L
Sbjct: 1089 VNSMVFSPDGRLLASGSDDN----TVRLWDPVTGTLQQTLEGHTGWVKTMVFSPDG-RLL 1143

Query: 274  ISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +S   D  + ++  D  +   ++ L        S  +SPD   +   SD      + +  
Sbjct: 1144 VSGSDDNTVRLW--DPVTGTLQQTLKGHTDPVNSMVFSPDGRLLASGSD---DNTVRLWD 1198

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                  ++  +          +SP G L+           + +        +  ++    
Sbjct: 1199 PVTGTLQQTLEGHTGWVKTVAFSPDGRLLVSGSDDNT---VRLWDPVTGTLQQTLKGHTD 1255

Query: 393  --QAPTWSPSGRSLIFSRKKD 411
               +  +SP GR L      D
Sbjct: 1256 PVNSMVFSPDGRLLASGSDDD 1276



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 67/210 (31%), Gaps = 16/210 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    FSP+ + +A  + D      V L D       + +      +    
Sbjct: 744 QTLEGHIDPVNSVAFSPDGRLLASGSDDK----TVRLWDPATGALQQTLKGHIDWVETVA 799

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
           FS +G+    S   D  + ++  D  +   ++       ++   ++SPD   +   S   
Sbjct: 800 FSPDGRLLA-SSSYDNTVRLW--DPATGTLQQTLEGHTCSVVPVAFSPDGRLLASCSS-- 854

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +        ++  +          +SP G L+A          I +        
Sbjct: 855 -DKTVRLWDPATGTLQQTLEGHTDLVNSVAFSPDGRLLASGSRDK---IIRLWDPATGAL 910

Query: 384 RLLV--EDSNLQAPTWSPSGRSLIFSRKKD 411
           +  +      +++  +SP GR L  S   +
Sbjct: 911 QQTLKGHTGWVESVAFSPDGRLLASSSDDN 940



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 93/295 (31%), Gaps = 41/295 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            GR++  G D   V  RLWD                       HT  D +   +    G  
Sbjct: 1140 GRLLVSGSDDNTV--RLWDPVTGTL-----------QQTLKGHT--DPVNSMVFSPDG-- 1182

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
              R+L       SG   N++ + D     ++         +    FSP+ + +   + D+
Sbjct: 1183 --RLL------ASGSDDNTVRLWDPVTGTLQQTLEGHTGWVKTVAFSPDGRLLVSGSDDN 1234

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L D       + +      + +  FS +G+    S   D+ + ++  D  + A
Sbjct: 1235 ----TVRLWDPVTGTLQQTLKGHTDPVNSMVFSPDGRLLA-SGSDDDTVRLW--DPATGA 1287

Query: 294  TERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             ++        +   ++SPD   +   S     + + +        ++  +    S    
Sbjct: 1288 LQQTLEGHTDPVEFVTFSPDGRLLASCSS---DKTIRLWDPATGTLQQTLEGHTRSVVSV 1344

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLI 405
             +S  G L+A          I +        +  ++          +S  GR L 
Sbjct: 1345 AFSTNGRLLASGSRDK---IIRLWDPATGTLQQTLKGHINWVKTVAFSRDGRLLA 1396



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 63/187 (33%), Gaps = 17/187 (9%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFE 319
           +  FS +G+    S   D+ + ++  D  + A ++ T    I+   + ++SPD   +   
Sbjct: 755 SVAFSPDGRLLA-SGSDDKTVRLW--DPATGALQQ-TLKGHIDWVETVAFSPDGRLLASS 810

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S       + +        ++  +    S     +SP G L+A          + +    
Sbjct: 811 SY---DNTVRLWDPATGTLQQTLEGHTCSVVPVAFSPDGRLLASCSSDKT---VRLWDPA 864

Query: 380 GSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               +  +E       +  +SP GR L    +   D   +L+        +TL     + 
Sbjct: 865 TGTLQQTLEGHTDLVNSVAFSPDGRLLASGSR---DKIIRLWDPATGALQQTLKGHTGWV 921

Query: 438 SDPQWVG 444
               +  
Sbjct: 922 ESVAFSP 928



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 73/227 (32%), Gaps = 32/227 (14%)

Query: 116  VIKEGKDRLRVEF------RLWDVKDR---KQIIGKKFFSSPASW----RKIAHTISDDI 162
            V      RL          RLWD       + + G        ++    R +A    D I
Sbjct: 1302 VTFSPDGRLLASCSSDKTIRLWDPATGTLQQTLEGHTRSVVSVAFSTNGRLLASGSRDKI 1361

Query: 163  Y----------QSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSR 210
                       Q       ++   + F  +     SG   N++ + D     ++      
Sbjct: 1362 IRLWDPATGTLQQTLKGHINWVKTVAFSRDGRLLASGSHDNTVRLWDPATGTLQQTLEGH 1421

Query: 211  DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
               +    FS + + +A  ++D+     V L D       + +      +    FS +G+
Sbjct: 1422 IDWVETVAFSLDGRLLASGSHDN----TVRLWDPATGALQQTLKGHIDWVETVAFSLDGR 1477

Query: 271  RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                S   D  + ++  D  + A + + +T  +     +S DSS + 
Sbjct: 1478 LLA-SGSHDNTVRLW--DPVTGALKEILSTHGLLTEVEFSQDSSYLA 1521


>gi|145506354|ref|XP_001439140.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406319|emb|CAK71743.1| unnamed protein product [Paramecium tetraurelia]
          Length = 557

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 109/325 (33%), Gaps = 27/325 (8%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQ---IIGKKFFSSPASWRKIAHTIS---DDIYQSITGEK 170
                       RLWDVK  +Q   + G    +S           S   D+  +    + 
Sbjct: 150 TTLASGGGDCSIRLWDVKTGQQKAKLDGHSRVNSVNFSPDGTTLASGSEDNSIRLWDVKT 209

Query: 171 GDFNSRI--LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           G   ++I   F      SG   NS+ + D      +         +    FSP+   +A 
Sbjct: 210 GQQKAKIRWSFALCLFTSGSSDNSIRLWDVKTGQQKAKLDGHSDYVRSVNFSPDGTTLAS 269

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D+     + L D +  +   ++      + +  FS +G     S   D ++ ++  D
Sbjct: 270 GSDDN----SIRLWDVKTGQQKAKLDGHSHYVYSVNFSPDGTTLA-SGSDDNSIRLW--D 322

Query: 289 LQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +++   + +L        S ++SPD + +   SD      + +       QK        
Sbjct: 323 VKTGQQKAKLDGHSDYVRSVNFSPDGTTLASGSD---DNSIRLWDVKTGQQKAKLDGHSG 379

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
             +   +SP G  +A          I +      Q++  ++  +    +  +SP G +L 
Sbjct: 380 YVYSVNFSPDGTTLASGSSDNS---IRLWDVKTGQQKAKLDGHSEAVISVNFSPDGTTLA 436

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETL 430
                  D   +L+ +    +   L
Sbjct: 437 ---SGSWDNSIRLWDVKTGQQKAKL 458



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 93/287 (32%), Gaps = 39/287 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  +Q          A     +H     +Y       G     
Sbjct: 265 TTLASGSDDNSIRLWDVKTGQQ---------KAKLDGHSH----YVYSVNFSPDG----- 306

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG   NS+ + D      +         +    FSP+   +A  + D+   
Sbjct: 307 -----TTLASGSDDNSIRLWDVKTGQQKAKLDGHSDYVRSVNFSPDGTTLASGSDDN--- 358

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D +  +   ++      + +  FS +G     S   D ++ ++  D+++   + 
Sbjct: 359 -SIRLWDVKTGQQKAKLDGHSGYVYSVNFSPDGTTLA-SGSSDNSIRLW--DVKTGQQKA 414

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L       IS ++SPD + +   S       + +       QK      E       +S
Sbjct: 415 KLDGHSEAVISVNFSPDGTTLASGS---WDNSIRLWDVKTGQQKAKLDGHEYEILSVNFS 471

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPS 400
           P G  +A          I +      Q++  ++  +    +  +SP 
Sbjct: 472 PDGTTLASGSADNS---IRLWDVKTGQQKAKLDGHSEAVISVNFSPD 515



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 79/264 (29%), Gaps = 48/264 (18%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+   +A           + L D +  +   ++     +  +  FS
Sbjct: 133 LDGHSSAVQSVNFSPDGTTLA----SGGGDCSIRLWDVKTGQQKAKLDGHSRVN-SVNFS 187

Query: 267 SNGKRALISVQKDEAMDIYSV------------------------------DLQSNATE- 295
            +G     S  +D ++ ++ V                              D+++   + 
Sbjct: 188 PDGTTLA-SGSEDNSIRLWDVKTGQQKAKIRWSFALCLFTSGSSDNSIRLWDVKTGQQKA 246

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L        S ++SPD + +   SD      + +       QK          +   +S
Sbjct: 247 KLDGHSDYVRSVNFSPDGTTLASGSD---DNSIRLWDVKTGQQKAKLDGHSHYVYSVNFS 303

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGD 413
           P G  +A          I +      Q++  ++  +    +  +SP G +L        D
Sbjct: 304 PDGTTLASGSDDNS---IRLWDVKTGQQKAKLDGHSDYVRSVNFSPDGTTLASGSD---D 357

Query: 414 TGSKLYSIDLNGRNETLINTPAYA 437
              +L+ +    +   L     Y 
Sbjct: 358 NSIRLWDVKTGQQKAKLDGHSGYV 381



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 59/220 (26%), Gaps = 42/220 (19%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+    S + +  FS +G              I   D+++   +   +      S ++SP
Sbjct: 132 RLDGHSSAVQSVNFSPDGTTLA---SGGGDCSIRLWDVKTGQQKAKLDGHSRVNSVNFSP 188

Query: 312 DSSQIV------------------------------FESDREGKEQLYVMQSNGSDQKRI 341
           D + +                               F S       + +       QK  
Sbjct: 189 DGTTLASGSEDNSIRLWDVKTGQQKAKIRWSFALCLFTSGSS-DNSIRLWDVKTGQQKAK 247

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSP 399
                       +SP G  +A          I +      Q++  ++  +    +  +SP
Sbjct: 248 LDGHSDYVRSVNFSPDGTTLASGSDDNS---IRLWDVKTGQQKAKLDGHSHYVYSVNFSP 304

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            G +L        D   +L+ +    +   L     Y   
Sbjct: 305 DGTTLASGSD---DNSIRLWDVKTGQQKAKLDGHSDYVRS 341


>gi|254410842|ref|ZP_05024620.1| hypothetical protein MC7420_320 [Microcoleus chthonoplastes PCC 7420]
 gi|196182197|gb|EDX77183.1| hypothetical protein MC7420_320 [Microcoleus chthonoplastes PCC 7420]
          Length = 1312

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 58/331 (17%), Positives = 103/331 (31%), Gaps = 43/331 (12%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            R++    D      +LWD    K +   + + +             D+        G   
Sbjct: 870  RIVSGSDDN---TLKLWDTTSGKLLHTFRGYGA-------------DVNAVAFSPDG--- 910

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                     +VSG   N+L + D     + +     D  +    FSP+  ++   + D+ 
Sbjct: 911  -------NRIVSGSDDNTLKLWDTTSGKLLHTFRGYDADVNAVAFSPDGNRIVSGSDDN- 962

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                + L DT   +           + A  F+ NGKR + S   D  + ++  D      
Sbjct: 963  ---TLKLWDTTSGKLLHTFRGHEDAVNAVAFNPNGKRIV-SGSDDNTLKLW--DTSGKLL 1016

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                       + ++SPD  +IV  S   G   L +  +         +  EAS     +
Sbjct: 1017 HTFRGHPGGVTAVAFSPDGKRIVSGS---GDGTLKLWDTTSGKLLHTFRGHEASVSAVAF 1073

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            SP G  I           + +    G+           + A  +SP G+ ++      GD
Sbjct: 1074 SPDGQTIVSGSTDTT---LKLWDTSGNLLDTFRGHPGGVTAVAFSPDGKRIV---SGSGD 1127

Query: 414  TGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               KL+         T     A  S   +  
Sbjct: 1128 GTLKLWDTTSGKLLHTFRGHEASVSAVAFSP 1158



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 57/309 (18%), Positives = 102/309 (33%), Gaps = 48/309 (15%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            R++    D      +LWD    K +    F               D +        G   
Sbjct: 954  RIVSGSDDN---TLKLWDTTSGKLL--HTFRGHE-----------DAVNAVAFNPNG--- 994

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                   + +VSG   N+L + D  G  + +        +    FSP+ +++   + D  
Sbjct: 995  -------KRIVSGSDDNTLKLWDTSGK-LLHTFRGHPGGVTAVAFSPDGKRIVSGSGDG- 1045

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                + L DT   +         + + A  FS +G+  + S   D  + ++  D   N  
Sbjct: 1046 ---TLKLWDTTSGKLLHTFRGHEASVSAVAFSPDGQTIV-SGSTDTTLKLW--DTSGNLL 1099

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +          + ++SPD  +IV  S   G   L +  +         +  EAS     +
Sbjct: 1100 DTFRGHPGGVTAVAFSPDGKRIVSGS---GDGTLKLWDTTSGKLLHTFRGHEASVSAVAF 1156

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKD 411
            SP G  I  +  +     +     D S   L     +   + A  +SP G+ +I      
Sbjct: 1157 SPDGQTIV-SGSTDTTLKLW----DTSGNLLDTFRGHEDAVDAVAFSPDGKRIISGSY-- 1209

Query: 412  GDTGSKLYS 420
             D   KL+ 
Sbjct: 1210 -DNTFKLWR 1217



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 60/340 (17%), Positives = 112/340 (32%), Gaps = 61/340 (17%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           R++    D      +LWD    K +         AS   +A   S D             
Sbjct: 662 RIVSGSDDN---TLKLWDTTSGKLL--DTLEGHEASVSAVA--FSPD------------- 701

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                  + +VSG   N+L + D    N+       +  +    FSP+ +++   + D  
Sbjct: 702 ------GKRIVSGSDDNTLKLWDTTSGNLLDTLEGHEASVSAVTFSPDGKRIVSGSDDR- 754

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
               + L DT  +     +  FR     + A  FS +GKR + S   D  + ++  D  S
Sbjct: 755 ---TLKLWDTSGN----LLHTFRGYEADVNAVAFSPDGKRIV-SGSDDRTLKLW--DTTS 804

Query: 292 NATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                L        + +   ++PD  +IV  SD    +++        +     +  E +
Sbjct: 805 GNL--LDTFRGHEDAVNAVAFNPDGKRIVSGSD----DRMLKFWDTSGNLLDTFRGHEDA 858

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSL 404
                ++P G  I  +        +     D +  +LL       +++ A  +SP G  +
Sbjct: 859 VNAVAFNPDGKRIV-SGSDDNTLKLW----DTTSGKLLHTFRGYGADVNAVAFSPDGNRI 913

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +       D   KL+         T     A  +   +  
Sbjct: 914 VSGSD---DNTLKLWDTTSGKLLHTFRGYDADVNAVAFSP 950



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 14/170 (8%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPD 312
               + + A  F+ NGKR + S   D  + ++  D  S    + L        + ++SPD
Sbjct: 645 SGHEASVSAVAFNPNGKRIV-SGSDDNTLKLW--DTTSGKLLDTLEGHEASVSAVAFSPD 701

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +IV  SD      L +  +   +     +  EAS     +SP G  I       +   
Sbjct: 702 GKRIVSGSD---DNTLKLWDTTSGNLLDTLEGHEASVSAVTFSPDGKRIV---SGSDDRT 755

Query: 373 IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +    G+        ++++ A  +SP G+ ++       D   KL+  
Sbjct: 756 LKLWDTSGNLLHTFRGYEADVNAVAFSPDGKRIVSGSD---DRTLKLWDT 802


>gi|194359645|gb|ACF57670.1| EstC [Geobacillus thermoleovorans]
          Length = 673

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 82/237 (34%), Gaps = 52/237 (21%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYS----VDLQSNATERLTNTLFINISASYSPDSS 314
            +  P ++ +G RA+   +  +    Y     +     +  + T   + ++   +SP   
Sbjct: 23  SVRDPHYAPDGTRAVFVEKSIDEEKQYRSHLWIWAADGSVRQWTFGRWRDMKPRFSPRGE 82

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA------------ 362
            I F SDR G+ QL+++ +NG + ++++  K     D VWSP G  +             
Sbjct: 83  MIAFLSDRSGRTQLWLLPANGGEARQLTFFKNG-VRDYVWSPDGTFLIALTTLGDEETIE 141

Query: 363 -----------------------FTKFSGEKFAIGVMK-------KDGSQERLLVEDSNL 392
                                  + K     F  G            G  E L   +  +
Sbjct: 142 DREEQKTAEQKPADSKPRVVERLYYKSDASGFLDGKQDVLVRIDAASGKTEALTGREEEI 201

Query: 393 QAPTWSPSGRSLIFSRKKDGD----TGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
            +   SP+GR+L F   ++ D        +  +DL  + ET L N     +   W  
Sbjct: 202 GSFAVSPTGRTLAFVANRNDDPDTTFTRDIVLLDLESKAETNLTNGCGTFASLAWSP 258



 Score = 93.5 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 87/276 (31%), Gaps = 54/276 (19%)

Query: 210 RDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           R + + +P ++P+  +  +   + D+E   R +L     D + ++    R   + PRFS 
Sbjct: 20  RLRSVRDPHYAPDGTRAVFVEKSIDEEKQYRSHLWIWAADGSVRQWTFGRWRDMKPRFSP 79

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS------------- 314
            G+       +     ++ +        +LT          +SPD +             
Sbjct: 80  RGEMIAFLSDRSGRTQLWLLPANGGEARQLTFFKNGVRDYVWSPDGTFLIALTTLGDEET 139

Query: 315 -----------------------QIVFESDREG-----KEQLYVMQSNGSDQKRISQDKE 346
                                  ++ ++SD  G     ++ L  + +     + ++  +E
Sbjct: 140 IEDREEQKTAEQKPADSKPRVVERLYYKSDASGFLDGKQDVLVRIDAASGKTEALT-GRE 198

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
                   SP G  +AF     +         I ++  +   E  L        +  WSP
Sbjct: 199 EEIGSFAVSPTGRTLAFVANRNDDPDTTFTRDIVLLDLESKAETNLTNGCGTFASLAWSP 258

Query: 400 SGRSLIFSRK---KDGDTGSKLYSIDLNGRNETLIN 432
            G  L          G T  +LY  +     + ++ 
Sbjct: 259 DGTKLAAIGHDLAYLGATLHRLYVFEPERGTKRVLT 294



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 93/309 (30%), Gaps = 67/309 (21%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-------------------- 227
             +  L ++  +G   R LT  ++ +     +SP+   +                     
Sbjct: 91  SGRTQLWLLPANGGEARQLTFFKNGVRDY-VWSPDGTFLIALTTLGDEETIEDREEQKTA 149

Query: 228 ---------------YATYDDEDILR----VYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                          Y   D    L     V +         + +      I +   S  
Sbjct: 150 EQKPADSKPRVVERLYYKSDASGFLDGKQDVLVRIDAASGKTEALTGREEEIGSFAVSPT 209

Query: 269 GKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD- 321
           G+       +++  D      I  +DL+S A   LTN      S ++SPD +++      
Sbjct: 210 GRTLAFVANRNDDPDTTFTRDIVLLDLESKAETNLTNGCGTFASLAWSPDGTKLAAIGHD 269

Query: 322 ----REGKEQLYVMQSNGSDQKRISQDKEASYFD--------------PVWSPQGDLIAF 363
                    +LYV +     ++ ++ D +    D              P+W+  G  +  
Sbjct: 270 LAYLGATLHRLYVFEPERGTKRVLTADWDVHLGDAMVGDTHADAKGPGPIWASDGSGLYV 329

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           T     +  +  +  DG    ++  + +L      PS +    +   +      LY I L
Sbjct: 330 TASERGRVNLYFVPLDGPIVPVIEGNFHLYGLAIHPSEQQ-AIAAMSEPTVIGDLYIISL 388

Query: 424 -NGRNETLI 431
            +G    L 
Sbjct: 389 EDGTKTRLT 397


>gi|138894519|ref|YP_001124972.1| acylaminoacyl-peptidase [Geobacillus thermodenitrificans NG80-2]
 gi|134266032|gb|ABO66227.1| Acylaminoacyl-peptidase [Geobacillus thermodenitrificans NG80-2]
          Length = 672

 Score = 96.6 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 81/237 (34%), Gaps = 52/237 (21%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIY----SVDLQSNATERLTNTLFINISASYSPDSS 314
            +  P ++S+G   +   +  +    Y     +  +  A  + T   + +    +SPDS 
Sbjct: 22  SVRDPHYASDGTHGVFVQKSIDEEKQYCSHLYIWTEDGAVRQWTFGRWRDTRPRFSPDSK 81

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI- 373
            I F SDR G  QL+++ ++G + ++++  K     D VW+P G  +      G+   I 
Sbjct: 82  TIAFLSDRSGHTQLWLLPADGGEARQLTFFKNG-VRDYVWAPDGTFLIALTTLGDNETID 140

Query: 374 -----------------------------------------GVMKKDGSQERLLVEDSNL 392
                                                     +    G  E L   +  +
Sbjct: 141 DREEPKKKETKPADLKPRVVERLYYKSDASGFLDGKQAVLVCIDATSGKTEALTSREEEI 200

Query: 393 QAPTWSPSGRSLIFSRKKDGD----TGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
            +   SP+GR+L F   ++ D        +  +DL  + ET L       +   W  
Sbjct: 201 SSFAISPNGRTLAFMANRNEDPDTTFTRDIVLLDLESKAETNLTKGSGTFTSLAWSP 257



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 85/277 (30%), Gaps = 56/277 (20%)

Query: 210 RDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           R + + +P ++ +     +   + D+E     +L     D A ++    R     PRFS 
Sbjct: 19  RLRSVRDPHYASDGTHGVFVQKSIDEEKQYCSHLYIWTEDGAVRQWTFGRWRDTRPRFSP 78

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS------------- 314
           + K       +     ++ +        +LT          ++PD +             
Sbjct: 79  DSKTIAFLSDRSGHTQLWLLPADGGEARQLTFFKNGVRDYVWAPDGTFLIALTTLGDNET 138

Query: 315 -----------------------QIVFESDREG-----KEQLYVMQSNGSDQKRISQDKE 346
                                  ++ ++SD  G     +  L  + +     + ++  +E
Sbjct: 139 IDDREEPKKKETKPADLKPRVVERLYYKSDASGFLDGKQAVLVCIDATSGKTEALTSREE 198

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
                   SP G  +AF     E         I ++  +   E  L +      +  WSP
Sbjct: 199 -EISSFAISPNGRTLAFMANRNEDPDTTFTRDIVLLDLESKAETNLTKGSGTFTSLAWSP 257

Query: 400 SGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLIN 432
            G  L  +   D    G T  +LY  +     + ++ 
Sbjct: 258 DGTKLA-AIGHDLAFLGATIHQLYVFEPERGTKRVLT 293



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 93/309 (30%), Gaps = 66/309 (21%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-------------------- 227
                L ++  DG   R LT  ++ +     ++P+   +                     
Sbjct: 90  SGHTQLWLLPADGGEARQLTFFKNGVRDY-VWAPDGTFLIALTTLGDNETIDDREEPKKK 148

Query: 228 ---------------YATYDDEDILR----VYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                          Y   D    L     V +         + + +    I +   S N
Sbjct: 149 ETKPADLKPRVVERLYYKSDASGFLDGKQAVLVCIDATSGKTEALTSREEEISSFAISPN 208

Query: 269 GKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD- 321
           G+       ++E  D      I  +DL+S A   LT       S ++SPD +++      
Sbjct: 209 GRTLAFMANRNEDPDTTFTRDIVLLDLESKAETNLTKGSGTFTSLAWSPDGTKLAAIGHD 268

Query: 322 ----REGKEQLYVMQSNGSDQKRISQDKEASYFD--------------PVWSPQGDLIAF 363
                    QLYV +     ++ ++ D +    D              P+W   G  +  
Sbjct: 269 LAFLGATIHQLYVFEPERGTKRVLTADWDVHLGDAMVGDTHADAKGPGPIWKRDGTGLYV 328

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           T     +  +  +  DG    ++  D ++      P+ +    +   +      LY+I L
Sbjct: 329 TASERGRVNVYFVPLDGPIVPIIEGDFHVYGLAIHPNEQQ-AVAAISEPTMIGDLYTISL 387

Query: 424 NGRNETLIN 432
               +T + 
Sbjct: 388 ESGTKTRLT 396



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/237 (11%), Positives = 71/237 (29%), Gaps = 27/237 (11%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+ + S++      K ++ V     +       SR++ +     SPN + +A+    +ED
Sbjct: 162 RLYYKSDASGFLDGKQAVLVCIDATSGKTEALTSREEEISSFAISPNGRTLAFMANRNED 221

Query: 236 ILRVYLMDT----RIDRAPKRIGNFRSMILAPRFSSNGKRAL-----ISVQKDEAMDIYS 286
               +  D        +A   +        +  +S +G +       ++        +Y 
Sbjct: 222 PDTTFTRDIVLLDLESKAETNLTKGSGTFTSLAWSPDGTKLAAIGHDLAFLGATIHQLYV 281

Query: 287 VDLQSNATERLTNTLFI--------NI-------SASYSPDSSQIVFESDREGKEQLYVM 331
            + +      LT    +        +           +  D + +   +   G+  +Y +
Sbjct: 282 FEPERGTKRVLTADWDVHLGDAMVGDTHADAKGPGPIWKRDGTGLYVTASERGRVNVYFV 341

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLV 387
             +G     I  + +   +     P     +A          +  +  +   +  L 
Sbjct: 342 PLDGPIVPII--EGDFHVYGLAIHPNEQQAVAAISEPTMIGDLYTISLESGTKTRLT 396


>gi|46122903|ref|XP_386005.1| hypothetical protein FG05829.1 [Gibberella zeae PH-1]
          Length = 676

 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 32/179 (17%)

Query: 265 FSSNGKRALISVQ-----KDEAMDIYSVDLQS----NATERLTNTLFINISASYSPDSSQ 315
           FS NG+R + S       +       ++ L S    N++ +LT+  F + S ++ P+   
Sbjct: 27  FSPNGQRLVYSTSLVGGHRKGKNHTSTLWLASTYEPNSSRKLTSGSFHDTSPTWHPNGDS 86

Query: 316 IVFESDR---EGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTK------ 365
           I+F SDR        ++ M+ +G D   I+ +D E        SP G  IA+        
Sbjct: 87  ILFLSDRVKLGETSAIWRMRLDGGDPVAITAEDNEQDIDTFSISPDGKTIAYVSCDEKKK 146

Query: 366 ---------FSGEKF---AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
                      GEK+    + ++  +  + +++V  D+++    WSP G+SL F    +
Sbjct: 147 DDDEEAEPEVWGEKWDHARLRIVDVETHETKVIVGGDTHVGEIAWSPDGKSLTFMSTHN 205



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 80/249 (32%), Gaps = 48/249 (19%)

Query: 218 RFSPNQQKVAYATY-------DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +FSPN Q++ Y+T               ++L  T    + +++ +      +P +  NG 
Sbjct: 26  KFSPNGQRLVYSTSLVGGHRKGKNHTSTLWLASTYEPNSSRKLTSGSFHDTSPTWHPNGD 85

Query: 271 RALISVQK---DEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFES---- 320
             L    +    E   I+ + L       +T   N   I+   S SPD   I + S    
Sbjct: 86  SILFLSDRVKLGETSAIWRMRLDGGDPVAITAEDNEQDIDTF-SISPDGKTIAYVSCDEK 144

Query: 321 --------------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
                         ++    +L ++     + K I    +    +  WSP G  + F   
Sbjct: 145 KKDDDEEAEPEVWGEKWDHARLRIVDVETHETKVIV-GGDTHVGEIAWSPDGKSLTFMST 203

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSN-------LQAPT---WSPSGRSLIFSRKKDGD--- 413
                    M        +++E          +  P    W+P G  + F      D   
Sbjct: 204 HNPHIEEA-MLTGTFISTVIIETGQVKHLCTVMNEPYNLIWAPDG-LVYFITGTPSDKDS 261

Query: 414 TGSKLYSID 422
            G  +YS +
Sbjct: 262 GGRSVYSTN 270



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 71/248 (28%), Gaps = 40/248 (16%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V          ++L +      N      S       P + PN   + + +   +     
Sbjct: 41  VGGHRKGKNHTSTLWLASTYEPNSSRKLTSGSFHDTSPTWHPNGDSILFLSDRVKLGETS 100

Query: 240 YLMDTRID-RAPKRIG--NFRSMILAPRFSSNGKRALISV------------------QK 278
            +   R+D   P  I   +    I     S +GK                        +K
Sbjct: 101 AIWRMRLDGGDPVAITAEDNEQDIDTFSISPDGKTIAYVSCDEKKKDDDEEAEPEVWGEK 160

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            +   +  VD++++ T+ +          ++SPD   + F S       +      G+  
Sbjct: 161 WDHARLRIVDVETHETKVIVGGDTHVGEIAWSPDGKSLTFMS--THNPHIEEAMLTGTFI 218

Query: 339 KRISQDKE---------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
             +  +              ++ +W+P G L+ F   +          KD     +   +
Sbjct: 219 STVIIETGQVKHLCTVMNEPYNLIWAPDG-LVYFITGTPS-------DKDSGGRSVYSTN 270

Query: 390 SNLQAPTW 397
               +P +
Sbjct: 271 PKDASPNF 278



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 51/266 (19%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           ++    +++    F  +  +W                   GD    ILF+S+ V  G   
Sbjct: 60  YEPNSSRKLTSGSFHDTSPTW----------------HPNGD---SILFLSDRVKLGETS 100

Query: 191 NSLCVMDRDGANIRYLT-PSRDQILFEPRFSPNQQKVAYAT----------------YDD 233
            ++  M  DG +   +T    +Q +     SP+ + +AY +                + +
Sbjct: 101 -AIWRMRLDGGDPVAITAEDNEQDIDTFSISPDGKTIAYVSCDEKKKDDDEEAEPEVWGE 159

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--------AMDIY 285
           +       +        K I    + +    +S +GK        +            I 
Sbjct: 160 KWDHARLRIVDVETHETKVIVGGDTHVGEIAWSPDGKSLTFMSTHNPHIEEAMLTGTFIS 219

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFE----SDRE-GKEQLYVMQSNGSDQKR 340
           +V +++   + L   +    +  ++PD   + F     SD++ G   +Y      +    
Sbjct: 220 TVIIETGQVKHLCTVMNEPYNLIWAPDG-LVYFITGTPSDKDSGGRSVYSTNPKDASPNF 278

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKF 366
           I      +         GD I   + 
Sbjct: 279 IKVGCGDNDDAGDIRVAGDKIIVNRQ 304


>gi|67541266|ref|XP_664407.1| hypothetical protein AN6803.2 [Aspergillus nidulans FGSC A4]
 gi|40739012|gb|EAA58202.1| hypothetical protein AN6803.2 [Aspergillus nidulans FGSC A4]
 gi|259480398|tpe|CBF71491.1| TPA: Pfs, NACHT and WD domain protein (AFU_orthologue;
           AFUA_7G07100) [Aspergillus nidulans FGSC A4]
          Length = 790

 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 83/215 (38%), Gaps = 20/215 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ Q VA A+ D      + L D         +   R  + +  FS +G+    S   
Sbjct: 474 FSPDGQIVASASDDG----TIRLWDAATGAEKYTLEGHRDWVNSVAFSPDGQVVA-SASD 528

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D    ++  D  + A + +       ++A ++SPD  ++   SD      + +     S 
Sbjct: 529 DRTTRLW--DAATGAEKHILKGHKDWVNAVAFSPDGQRVASASD---DWTIRLWDVATSA 583

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAP 395
           +K I +  +       +SP G ++A        + + +       E+  +E    N++A 
Sbjct: 584 EKHILEGHKDWVNAVAFSPDGQIVASASND---WTVRLWDTATGAEKQTLEGHKGNVKAV 640

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +SP G+ +  +     D   +L+     G  + +
Sbjct: 641 AFSPDGQIVASASN---DKTIRLWDA-TTGAGKQI 671



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 83/225 (36%), Gaps = 16/225 (7%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +++ Y     + I + Y+M    D   + +   +  + +  FS +G + + S   D  +
Sbjct: 433 GKRI-YWNQRSDFIEKAYIMQESWDPCIQTLEGHKHSVNSVVFSPDG-QIVASASDDGTI 490

Query: 283 DIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++  D  + A +  L        S ++SPD   +   SD +   +L+   +    +K I
Sbjct: 491 RLW--DAATGAEKYTLEGHRDWVNSVAFSPDGQVVASASD-DRTTRLW--DAATGAEKHI 545

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSP 399
            +  +       +SP G  +A      + + I +     S E+ ++E       A  +SP
Sbjct: 546 LKGHKDWVNAVAFSPDGQRVASAS---DDWTIRLWDVATSAEKHILEGHKDWVNAVAFSP 602

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            G+ +  +     D   +L+        +TL           +  
Sbjct: 603 DGQIVASASN---DWTVRLWDTATGAEKQTLEGHKGNVKAVAFSP 644



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 77/220 (35%), Gaps = 15/220 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V S     ++ + D      +Y        +    FSP+ Q VA A+ D        L D
Sbjct: 481 VASASDDGTIRLWDAATGAEKYTLEGHRDWVNSVAFSPDGQVVASASDDR----TTRLWD 536

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
                    +   +  + A  FS +G+R   S   D  + ++  D+ ++A +  L     
Sbjct: 537 AATGAEKHILKGHKDWVNAVAFSPDGQRVA-SASDDWTIRLW--DVATSAEKHILEGHKD 593

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              + ++SPD   +   S+      + +  +    +K+  +  + +     +SP G ++A
Sbjct: 594 WVNAVAFSPDGQIVASASN---DWTVRLWDTATGAEKQTLEGHKGNVKAVAFSPDGQIVA 650

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPSG 401
                     I +        + +   + +    W S  G
Sbjct: 651 SASNDKT---IRLWDATTGAGKQIHYLNVIPKAMWFSADG 687



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 73/212 (34%), Gaps = 38/212 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDR--KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           G+V+    D      RLWD      K I+               H   D +        G
Sbjct: 520 GQVVASASDDRTT--RLWDAATGAEKHILK-------------GHK--DWVNAVAFSPDG 562

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
                     + V S     ++ + D   +  +++       +    FSP+ Q VA A+ 
Sbjct: 563 ----------QRVASASDDWTIRLWDVATSAEKHILEGHKDWVNAVAFSPDGQIVASASN 612

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D      V L DT      + +   +  + A  FS +G + + S   D+ + ++  D  +
Sbjct: 613 D----WTVRLWDTATGAEKQTLEGHKGNVKAVAFSPDG-QIVASASNDKTIRLW--DATT 665

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDRE 323
            A +++     I  +  +S D       SDR 
Sbjct: 666 GAGKQIHYLNVIPKAMWFSADG--CCLNSDRG 695


>gi|226304510|ref|YP_002764468.1| S9 family peptidase [Rhodococcus erythropolis PR4]
 gi|226183625|dbj|BAH31729.1| putative S9 family peptidase [Rhodococcus erythropolis PR4]
          Length = 1122

 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 66/190 (34%), Gaps = 37/190 (19%)

Query: 264 RFSSNGKRALISVQ----KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             S +G   +              +++V   S    RLT     + +  +SPD + I F 
Sbjct: 21  AISPDGTVVVFVRSEIVAGKATTSLWAVSRDS-QARRLTAGPA-DSAPRFSPDGTSIAFL 78

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFT------------- 364
                  QL+++   G + + ++           PVWSP G+ IAF              
Sbjct: 79  RKVGDSAQLHLIPLAGGEAETLTTAASLPLGAGAPVWSPDGNAIAFAAVISRSDSTDPNA 138

Query: 365 ---------KFSGEKF------AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR 408
                    K  G  +       +  +  +    R L + D N   P+WSP G +L F+ 
Sbjct: 139 PIVTDRLGYKVDGAGWLGTFRRHLHTVDLETKAVRRLTDGDWNADVPSWSPDGTALAFTA 198

Query: 409 KKDGDTGSKL 418
             + D+   L
Sbjct: 199 NLEPDSDLNL 208



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 90/243 (37%), Gaps = 44/243 (18%)

Query: 160 DDIYQSITGEKGDFN---SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           DD+++ +T  +   +   + ++FV   +V+G    SL  + RD    R      D     
Sbjct: 9   DDLHRVVTPTETAISPDGTVVVFVRSEIVAGKATTSLWAVSRDSQARRLTAGPADSA--- 65

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALI 274
           PRFSP+   +A+      D  +++L+      A       +      AP +S +G     
Sbjct: 66  PRFSPDGTSIAFLR-KVGDSAQLHLIPLAGGEAETLTTAASLPLGAGAPVWSPDGNAIAF 124

Query: 275 SV---------------------QKDEAMDI-------YSVDLQSNATERLTNTLFINIS 306
           +                      + D A  +       ++VDL++ A  RLT+  +    
Sbjct: 125 AAVISRSDSTDPNAPIVTDRLGYKVDGAGWLGTFRRHLHTVDLETKAVRRLTDGDWNADV 184

Query: 307 ASYSPDSSQIVFESDREGKEQLY-------VMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            S+SPD + + F ++ E    L        ++  + S   +            +W PQGD
Sbjct: 185 PSWSPDGTALAFTANLEPDSDLNLTFSAYRILVDDLSVPPQRLGHATGVQGSTLWHPQGD 244

Query: 360 LIA 362
            + 
Sbjct: 245 SVV 247



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 11/100 (11%)

Query: 353 VWSPQGDLIAFTKFS----GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             SP G ++ F +          ++  + +D SQ R L       AP +SP G S+ F R
Sbjct: 21  AISPDGTVVVFVRSEIVAGKATTSLWAVSRD-SQARRLTAGPADSAPRFSPDGTSIAFLR 79

Query: 409 KKDGDTGSKLYSIDLNGRNETLINT----PAYASDPQWVG 444
           K      ++L+ I L G     + T    P  A  P W  
Sbjct: 80  KVGDS--AQLHLIPLAGGEAETLTTAASLPLGAGAPVWSP 117



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 71/218 (32%), Gaps = 13/218 (5%)

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE-FRLW--DVKDRKQIIGKKFFS 146
           ++T+ D       W+  G  +  T  +  +    L    +R+   D+    Q +G     
Sbjct: 174 RLTDGDWNADVPSWSPDGTALAFTANLEPDSDLNLTFSAYRILVDDLSVPPQRLGHATGV 233

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
             ++     H   D +    T E     + ++ +S    +    +       D    R +
Sbjct: 234 QGSTL---WHPQGDSVVAIGTPEVRVGTADLIRLSVPGPTETPVDVTLTAHLD----RNV 286

Query: 207 TPSRDQILF-EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            P         P  S  + ++ +   D      +Y  D     +   + N   ++ A   
Sbjct: 287 MPGAPGYPGGTPALSNTRDEIVFCLRD-RGWTHLYAADIETGTSRSLVANPNEVVSALSV 345

Query: 266 SSNGKRA-LISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + + + A +I   +    ++  VDL S A   LT    
Sbjct: 346 ARDARVASVIVTTQQSFGEVALVDLDSGAVTTLTKFTA 383


>gi|159029360|emb|CAO90736.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 1078

 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 90/225 (40%), Gaps = 22/225 (9%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +         ++    SP++QK+A A+ D    ++++          + +   +  + +
Sbjct: 507 EKNQLQGHRGTIYSVSISPDRQKIASASQD--KTVKIWNQK---GENIQTLTGHQGAVYS 561

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             FS +G++   +  +D+   I+  +LQ        +      S S+SPD  +IV  S R
Sbjct: 562 VIFSPDGQKIA-TASEDKTAKIW--NLQGQNLVTYPDHQESVYSVSFSPDGQKIVTTS-R 617

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +   +L+ +     +  ++ +  + S     +SP G  IA     G    I +    G  
Sbjct: 618 DKTARLWNLS---GETLQVFKGHKRSIDAASFSPDGQKIATASRDGT---IKIWDLSGKI 671

Query: 383 ERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              L +++     +  +SP G+ +        D  +K++  DL G
Sbjct: 672 ILSLGQENTEAFYSVNFSPDGQKIA---GAAADKTAKIW--DLEG 711



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 73/199 (36%), Gaps = 16/199 (8%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           + Y     +          +   ++   R  I +   S + ++   S  +D+ + I+  +
Sbjct: 487 SKYPATSPIITLQQILDRIQEKNQLQGHRGTIYSVSISPDRQKIA-SASQDKTVKIW--N 543

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            +    + LT       S  +SPD  +I   S+    +   +    G +      D + S
Sbjct: 544 QKGENIQTLTGHQGAVYSVIFSPDGQKIATASE---DKTAKIWNLQGQNLV-TYPDHQES 599

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFS 407
            +   +SP G  I  T          +    G   ++      ++ A ++SP G+ +  +
Sbjct: 600 VYSVSFSPDGQKIVTTSRDKTA---RLWNLSGETLQVFKGHKRSIDAASFSPDGQKIATA 656

Query: 408 RKKDGDTGSKLYSIDLNGR 426
            +   D   K++  DL+G+
Sbjct: 657 SR---DGTIKIW--DLSGK 670



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 55/338 (16%), Positives = 113/338 (33%), Gaps = 43/338 (12%)

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
            QKI         + WN  G  ++         +    V F      D ++I+      +
Sbjct: 568 GQKIATASEDKTAKIWNLQGQNLV---TYPDHQESVYSVSFS----PDGQKIVTTSRDKT 620

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYL 206
              W      +S +  Q   G K   ++       + + +     ++ + D  G  I  L
Sbjct: 621 ARLW-----NLSGETLQVFKGHKRSIDAASFSPDGQKIATASRDGTIKIWDLSGKIILSL 675

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAP 263
                +  +   FSP+ QK+A A  D        + D   +     I  FR     + + 
Sbjct: 676 GQENTEAFYSVNFSPDGQKIAGAAADK----TAKIWDLEGN----LIATFRGHQDFVNSV 727

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G+   I+   D +  I+ +  Q      L        +A +S D  Q+V     +
Sbjct: 728 NFSPDGQFI-ITASSDGSAKIWGM--QGEEITTLRGHQESVFTAVFSQDGKQVV-TGSSD 783

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +++ + +             A       + QG++IA     G    I ++   G + 
Sbjct: 784 ETAKIWQLNN--------LNQTRADNTSVTINSQGNIIAIANKDG---QITLLDSQGKKI 832

Query: 384 R-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           R    +  ++ +  + P    +  + +       +++S
Sbjct: 833 REFTTKMRSIYSIAFHPDSNQIAITGRNG---KVQIWS 867



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 96/339 (28%), Gaps = 103/339 (30%)

Query: 171 GDFNSRILFVSESVVSGII------KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           G  N+   +       G          +  + D +G N+          +    FSP+ Q
Sbjct: 676 GQENTEAFYSVNFSPDGQKIAGAAADKTAKIWDLEG-NLIATFRGHQDFVNSVNFSPDGQ 734

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEA 281
            +  A+ D    +             + I   R     +    FS +GK+ +++   DE 
Sbjct: 735 FIITASSDGSAKI--------WGMQGEEITTLRGHQESVFTAVFSQDGKQ-VVTGSSDET 785

Query: 282 MDIY----------------------------------SVDLQSNATERLTNTLFINISA 307
             I+                                   +D Q       T  +    S 
Sbjct: 786 AKIWQLNNLNQTRADNTSVTINSQGNIIAIANKDGQITLLDSQGKKIREFTTKMRSIYSI 845

Query: 308 SYSPDSSQIVFESDREGKEQLYV------------------MQSNGSDQKRISQDKEASY 349
           ++ PDS+QI     R GK Q++                   +  NG     I+   E   
Sbjct: 846 AFHPDSNQIAIT-GRNGKVQIWSQKGTMLQEFTASQVPIYSLAFNGEGTAIITGTSEGKV 904

Query: 350 -----------------------FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-L 385
                                  +D V+SP    IA          I +    G+  + +
Sbjct: 905 QYWHLNNHRPQLINSWTVDDSIIYDLVFSPDHQKIATATRG----KIKIWDLQGNLLKEI 960

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +   +   ++SP G  +  +  +DG      + ID N
Sbjct: 961 KTDSFPVYGVSFSPDGEKIA-AISRDGTARR--WDIDGN 996



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 58/151 (38%), Gaps = 8/151 (5%)

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            N +  A  T   E  ++ + ++    +         S+I    FS + ++   + +    
Sbjct: 889  NGEGTAIITGTSEGKVQYWHLNNHRPQLINSWTVDDSIIYDLVFSPDHQKIATATR--GK 946

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            + I+  DLQ N  + +    F     S+SPD  +I   S R+G  + + +     + +  
Sbjct: 947  IKIW--DLQGNLLKEIKTDSFPVYGVSFSPDGEKIAAIS-RDGTARRWDID---GNLRSE 1000

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             + +E   +   +SP    I      G+K  
Sbjct: 1001 FKIEEDIVYGIAFSPDSQEIVIIARDGQKHR 1031



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 60/177 (33%), Gaps = 14/177 (7%)

Query: 136  RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
               II          W    H     +  S T +       +       ++   +  + +
Sbjct: 892  GTAIITGTSEGKVQYWHLNNHR--PQLINSWTVDDSIIYDLVFSPDHQKIATATRGKIKI 949

Query: 196  MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
             D  G N+     +    ++   FSP+ +K+A  + D     R + +D  +    K    
Sbjct: 950  WDLQG-NLLKEIKTDSFPVYGVSFSPDGEKIAAISRD--GTARRWDIDGNLRSEFKI--- 1003

Query: 256  FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
               ++    FS + +  +I + +D     + ++ + N  ++L     ++    +  D
Sbjct: 1004 EEDIVYGIAFSPDSQEIVI-IARDGQKHRWPLETEYNYLQKL-----LDRGCFWLED 1054


>gi|37522390|ref|NP_925767.1| WD repeat-containing protein [Gloeobacter violaceus PCC 7421]
 gi|35213391|dbj|BAC90762.1| WD-repeat protein [Gloeobacter violaceus PCC 7421]
          Length = 1193

 Score = 96.6 bits (239), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 105/329 (31%), Gaps = 44/329 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        +LWDV               A  R+I    ++ +Y       G     
Sbjct: 790  QSLASGGQDALIKLWDVAT-------------AQCRRILQGHTNLVYAVAFSPDG----- 831

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 +++ SG    ++ +   D    R         ++   FSP+ + +A A+ D    
Sbjct: 832  -----QTLASGSADQAVRLWKTDTGQCRKTIQGYTSGIYSVAFSPDGRTLASASTDH--- 883

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              V L DT      + +    S + A  FS +G+    S   D  + ++   +     + 
Sbjct: 884  -TVRLWDTATGECRQTLEGHHSWVFAVAFSPDGQTLA-SGSVDHTVLLWET-VTGRCRKI 940

Query: 297  LTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L        S  +SPD + I   S DR     + +  +       + Q          +S
Sbjct: 941  LEGHHSWVWSVVFSPDGTTIATGSADRT----VRIWNAATGRLSTVLQAHTGWVSAVAFS 996

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDT 414
              G ++A     G      V    G    LL E SN   +  +SP G  L        D 
Sbjct: 997  ADGRILASASADGTVRLWNVSN--GLCVALLAEHSNWVHSVVFSPDGSLLA---SGSADG 1051

Query: 415  GSKLYSIDLNGRNETLINTPAYASDPQWV 443
              +L+ +  N R   +I      + P W 
Sbjct: 1052 TVRLWDLQSN-RCTRVIE---GHTSPVWS 1076



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 61/329 (18%), Positives = 112/329 (34%), Gaps = 36/329 (10%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS-------PASWRKIAHTISDDIYQSI 166
            G ++  G     V  RLW+    + +   +  +            R IA   +D   +  
Sbjct: 705  GSIVASGSSDQTV--RLWETTTGQCLRILRGHTDWIHSVVFSPDGRSIASGGADRTVRLW 762

Query: 167  TGEKG-------DFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                G         +S I  V+ S       SG     + + D   A  R +      ++
Sbjct: 763  EAATGECRKSFPGHSSLIWSVAFSPDGQSLASGGQDALIKLWDVATAQCRRILQGHTNLV 822

Query: 215  FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            +   FSP+ Q +A  + D      V L  T   +  K I  + S I +  FS +G+    
Sbjct: 823  YAVAFSPDGQTLASGSADQ----AVRLWKTDTGQCRKTIQGYTSGIYSVAFSPDGRTLA- 877

Query: 275  SVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            S   D  + ++  D  +    + L        + ++SPD   +   S       + + ++
Sbjct: 878  SASTDHTVRLW--DTATGECRQTLEGHHSWVFAVAFSPDGQTLASGSV---DHTVLLWET 932

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                 ++I +   +  +  V+SP G  IA T  +     I           L      + 
Sbjct: 933  VTGRCRKILEGHHSWVWSVVFSPDGTTIA-TGSADRTVRIWNAATGRLSTVLQAHTGWVS 991

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            A  +S  GR L        D   +L+++ 
Sbjct: 992  AVAFSADGRILA---SASADGTVRLWNVS 1017



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 86/240 (35%), Gaps = 14/240 (5%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                 F        +++ SG + +++ + +      R +       ++   FSP+   +A
Sbjct: 902  HHSWVFAVAFSPDGQTLASGSVDHTVLLWETVTGRCRKILEGHHSWVWSVVFSPDGTTIA 961

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D      V + +    R    +      + A  FS++G R L S   D  + +++V
Sbjct: 962  TGSADR----TVRIWNAATGRLSTVLQAHTGWVSAVAFSADG-RILASASADGTVRLWNV 1016

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                     L        S  +SPD S +   S  +G  +L+      +   R+ +   +
Sbjct: 1017 S-NGLCVALLAEHSNWVHSVVFSPDGSLLASGS-ADGTVRLW--DLQSNRCTRVIEGHTS 1072

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
              +   +S  G L+A    +GE   I + +                + +  +SP G++L 
Sbjct: 1073 PVWSVAFSADGTLLA---SAGEDRIIRIWRTSTGGIHRAFPGHSRPVWSVAFSPDGQTLA 1129



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 97/274 (35%), Gaps = 21/274 (7%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           ++ H I  +I +  T     ++         V SG    ++ + +        +      
Sbjct: 595 QLPHGIQINICEGHTA--WVWSVGFSPDGSIVASGSSDQTVRLWETTTGQCLRILQGHAN 652

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            ++   FSP+   +A  + D      V L +T   +  + +      +L+  FS +G   
Sbjct: 653 SIWSVGFSPDGSIMASGSSDQ----TVRLWETTTGQCLRILQGHGGWVLSLAFSPDG-SI 707

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           + S   D+ + ++           L        S  +SPD   I       G ++   + 
Sbjct: 708 VASGSSDQTVRLWET-TTGQCLRILRGHTDWIHSVVFSPDGRSIA----SGGADRTVRLW 762

Query: 333 SNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--ED 389
              + + R S    +S  +   +SP G  +A     G+   I +     +Q R ++    
Sbjct: 763 EAATGECRKSFPGHSSLIWSVAFSPDGQSLA---SGGQDALIKLWDVATAQCRRILQGHT 819

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           + + A  +SP G++L        D   +L+  D 
Sbjct: 820 NLVYAVAFSPDGQTLA---SGSADQAVRLWKTDT 850



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 93/265 (35%), Gaps = 19/265 (7%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           D+ QS+  E     S + F     V  +G     +C+          +       ++   
Sbjct: 557 DLSQSMFTEPLGNISSVQFSPNRNVLATGDADGKVCLWQLPHGIQINICEGHTAWVWSVG 616

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+   VA  + D      V L +T   +  + +    + I +  FS +G     S   
Sbjct: 617 FSPDGSIVASGSSDQ----TVRLWETTTGQCLRILQGHANSIWSVGFSPDGSIMA-SGSS 671

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D+ + ++           L       +S ++SPD S +   S     + + + ++     
Sbjct: 672 DQTVRLWET-TTGQCLRILQGHGGWVLSLAFSPDGSIVASGSS---DQTVRLWETTTGQC 727

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPT 396
            RI +         V+SP G  IA     G    + + +    + R       S + +  
Sbjct: 728 LRILRGHTDWIHSVVFSPDGRSIA---SGGADRTVRLWEAATGECRKSFPGHSSLIWSVA 784

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
           +SP G+SL        D   KL+ +
Sbjct: 785 FSPDGQSLA---SGGQDALIKLWDV 806



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 71/206 (34%), Gaps = 21/206 (10%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                 ++        ++ +G    ++ + +     +  +  +    +    FS + + +A
Sbjct: 944  HHSWVWSVVFSPDGTTIATGSADRTVRIWNAATGRLSTVLQAHTGWVSAVAFSADGRILA 1003

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A+ D      V L +         +    + + +  FS +G     S   D  + ++  
Sbjct: 1004 SASADG----TVRLWNVSNGLCVALLAEHSNWVHSVVFSPDGSLLA-SGSADGTVRLW-- 1056

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESD-----REGKEQL-YVMQSNGSDQKRI 341
            DLQSN   R+      + S  +S     + F +D       G++++  + +++     R 
Sbjct: 1057 DLQSNRCTRVIEG---HTSPVWS-----VAFSADGTLLASAGEDRIIRIWRTSTGGIHRA 1108

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFS 367
                    +   +SP G  +A     
Sbjct: 1109 FPGHSRPVWSVAFSPDGQTLASGSQD 1134


>gi|269925369|ref|YP_003321992.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermobaculum terrenum ATCC BAA-798]
 gi|269789029|gb|ACZ41170.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermobaculum terrenum ATCC BAA-798]
          Length = 631

 Score = 96.6 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/260 (16%), Positives = 95/260 (36%), Gaps = 37/260 (14%)

Query: 219 FSPNQQKVAYATYDDED------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            SP+ + VAY   D            +Y+ D       K+  +       PR+S +  + 
Sbjct: 22  ISPDGKYVAYVIRDAYREELKVRSSHIYVADITTGE-SKQFTSGPGADACPRWSPDSNKL 80

Query: 273 LISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ--------------- 315
                ++E    D++++D+      +L +     +   +SPD                  
Sbjct: 81  AFISDREEEARFDLFTIDVHGGEAIKLADLEGSVLDLRWSPDGRYIGLLLEVSRNPHEDS 140

Query: 316 -IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-- 372
            +VFE +++   +++ + S+G D + +S +    +          L+A       +++  
Sbjct: 141 PMVFE-EKDQATRIWKVASSGGDAEPLSPEGLHVWEFEWLEDSSALVAVCSRYPYEWSWY 199

Query: 373 ---IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF---SRKKDGDTGSKLYSIDLNG 425
              + ++    S+ ++L   D  +  P  SP  + + F   S    G  G ++  +DL G
Sbjct: 200 EPFLALIDASSSEYKVLYSPDKQIANPAPSPDSKHIAFIKGSFSDRGSVGGEVCVVDLQG 259

Query: 426 RNETLIN--TPAYASDPQWV 443
                +    P      +W+
Sbjct: 260 GMYRSLTEDYPGSFCSVRWL 279



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/302 (16%), Positives = 103/302 (34%), Gaps = 32/302 (10%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G + + ++  +      +  + + V D      +  T         PR+SP+  K+A
Sbjct: 23  SPDGKYVAYVIRDAYREELKVRSSHIYVADITTGESKQFTSGPGADAC-PRWSPDSNKLA 81

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA--------------- 272
           + +  +E+                ++ +    +L  R+S +G+                 
Sbjct: 82  FISDREEEARFDLFTIDVHGGEAIKLADLEGSVLDLRWSPDGRYIGLLLEVSRNPHEDSP 141

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-----FESDREGKEQ 327
           ++  +KD+A  I+ V       E L+          +  DSS +V     +  +    E 
Sbjct: 142 MVFEEKDQATRIWKVASSGGDAEPLSPEGLHVWEFEWLEDSSALVAVCSRYPYEWSWYEP 201

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQ 382
              +    S + ++    +    +P  SP    IAF K            + V+   G  
Sbjct: 202 FLALIDASSSEYKVLYSPDKQIANPAPSPDSKHIAFIKGSFSDRGSVGGEVCVVDLQGGM 261

Query: 383 ERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            R L ED   +  +  W  +   ++    ++G+    L ++ L+G    L    +  S  
Sbjct: 262 YRSLTEDYPGSFCSVRWL-NSSCVLAIGYENGNAC--LLALSLDGNRRRLWLEESMVSH- 317

Query: 441 QW 442
           +W
Sbjct: 318 RW 319



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 11/109 (10%)

Query: 306 SASYSPDSSQIVFE---SDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            A  SPD   + +    + RE        +YV      + K+ +     +   P WSP  
Sbjct: 19  DAQISPDGKYVAYVIRDAYREELKVRSSHIYVADITTGESKQFTS-GPGADACPRWSPDS 77

Query: 359 DLIAFTKFSGE--KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSL 404
           + +AF     E  +F +  +   G +   L + + ++    WSP GR +
Sbjct: 78  NKLAFISDREEEARFDLFTIDVHGGEAIKLADLEGSVLDLRWSPDGRYI 126



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 32/100 (32%), Gaps = 9/100 (9%)

Query: 354 WSPQGDLIAFTKFSG-------EKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLI 405
            SP G  +A+                I V      + +           P WSP    L 
Sbjct: 22  ISPDGKYVAYVIRDAYREELKVRSSHIYVADITTGESKQFTSGPGADACPRWSPDSNKLA 81

Query: 406 FSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
           F   ++ +    L++ID++G     L +      D +W  
Sbjct: 82  FISDREEEARFDLFTIDVHGGEAIKLADLEGSVLDLRWSP 121



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 6/61 (9%)

Query: 390 SNLQAPTWSPSGRSLIFS-----RKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWV 443
            +++    SP G+ + +      R++     S +Y  D+  G ++   + P   + P+W 
Sbjct: 15  RHVEDAQISPDGKYVAYVIRDAYREELKVRSSHIYVADITTGESKQFTSGPGADACPRWS 74

Query: 444 G 444
            
Sbjct: 75  P 75


>gi|59802515|gb|AAX07501.1| WD-repeat protein [Gemmata sp. Wa1-1]
          Length = 465

 Score = 96.6 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 79/232 (34%), Gaps = 20/232 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYAT--YDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +     +  +    +SP+ Q +A  +  +         + D R  +  + I      +LA
Sbjct: 241 FTLVGHNNEIQALAWSPDGQLIASGSGHWSSGLESEFKIWDARTGQLLRTITQEIGTVLA 300

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
             FS +G     S   D  + ++  + ++    + L           +SPD  ++     
Sbjct: 301 LAFSPDGTVLA-SGSHDRVVRLW--NPRTGQLVKELPGHSNRVSRVVFSPDGKRLA---S 354

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKD 379
                   +          + +  + + F   +SP G ++     +G++  +  +     
Sbjct: 355 AALDNTARIWDLETGKTLHVLRGHKDNVFCLEFSPDGKMLV----TGDRKHVARVWDPAT 410

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           G   R      +L+A ++SP G  L F     G     ++  DL   N   +
Sbjct: 411 GKLLRTETGPGDLRATSFSPDGAWLAF-----GTFQGSIWVWDLTQPNAKPV 457



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 78/240 (32%), Gaps = 39/240 (16%)

Query: 114 GRVIKEGKD----RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           G++I  G       L  EF++WD +  + +                        ++IT E
Sbjct: 259 GQLIASGSGHWSSGLESEFKIWDARTGQLL------------------------RTITQE 294

Query: 170 KGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            G   +       +V  SG     + + +     +    P     +    FSP+ +++A 
Sbjct: 295 IGTVLALAFSPDGTVLASGSHDRVVRLWNPRTGQLVKELPGHSNRVSRVVFSPDGKRLAS 354

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           A  D+       + D    +    +   +  +    FS +GK  +     D        D
Sbjct: 355 AALDN----TARIWDLETGKTLHVLRGHKDNVFCLEFSPDGKMLV---TGDRKHVARVWD 407

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             +    R         + S+SPD + + F + +     ++V      + K +  +   S
Sbjct: 408 PATGKLLRTETGPGDLRATSFSPDGAWLAFGTFQG---SIWVWDLTQPNAKPVIHNPVGS 464


>gi|20089667|ref|NP_615742.1| hypothetical protein MA0783 [Methanosarcina acetivorans C2A]
 gi|19914593|gb|AAM04222.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 345

 Score = 96.6 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 109/282 (38%), Gaps = 17/282 (6%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           +I  +I+ +     S    V +   +G     L  M   G     L    +    EP  S
Sbjct: 7   EINSAISHQTSPVISGDYIVWQDERNGNWDIYLYDMSV-GMTETALFTGSED-EIEPAIS 64

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
                + + + D+     +YL D   +   + +   R+    P  S  G   + + ++++
Sbjct: 65  --GSSIVF-SDDNRGNYDIYLYDLDSEVKTQ-VTEDRTDQKEPAIS--GNYIVWTDRRNQ 118

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             DIY  D+ S    ++T         + S   + +V++  R G + +Y+   +   +  
Sbjct: 119 NTDIYMYDISSKKETQITTDKADQSQPAIS--GNIVVWKDTRSGNDDIYMYDISTGKESP 176

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSP 399
           +  D  AS  +PV   +G+ I +         I +      +   + V+ +  + P  S 
Sbjct: 177 VVTD-PASQTNPVI--EGNYIVWEDRRAGNLDIYMYDLSSGKTTPVCVDSAPQKTPAIS- 232

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            GR ++++  +   T   +Y I   G+ +T+  +  Y S+P 
Sbjct: 233 DGR-IVWADGRIKGTTIFIYDI-ATGQEKTVSTSSEYESNPA 272



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 54/165 (32%), Gaps = 11/165 (6%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +P  S N   +            +Y+ D    +    + +  +    P     G   +  
Sbjct: 144 QPAISGN---IVVWKDTRSGNDDIYMYDISTGKESPVVTD-PASQTNPVI--EGNYIVWE 197

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            ++   +DIY  DL S  T  +        + + S D  +IV+   R     +++     
Sbjct: 198 DRRAGNLDIYMYDLSSGKTTPVCVDSAPQKTPAIS-DG-RIVWADGRIKGTTIFIYDIAT 255

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +K +S   E      +    G+ I +         I +  ++G
Sbjct: 256 GQEKTVSTSSEYESNPAI---DGNRIVWQDKRKGTMDIYMFTEEG 297



 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 51/136 (37%), Gaps = 6/136 (4%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              + +      + L +Y+ D    +      +       P  S +G R + +  + +  
Sbjct: 191 GNYIVWEDRRAGN-LDIYMYDLSSGKTTPVCVDSAPQKT-PAIS-DG-RIVWADGRIKGT 246

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+  D+ +   + ++ +     + +   D ++IV++  R+G   +Y+    G +    +
Sbjct: 247 TIFIYDIATGQEKTVSTSSEYESNPAI--DGNRIVWQDKRKGTMDIYMFTEEGYETGAAA 304

Query: 343 QDKEASYFDPVWSPQG 358
            ++         SP G
Sbjct: 305 GEEMGDDAGAKESPLG 320


>gi|186680689|ref|YP_001863885.1| hypothetical protein Npun_F0142 [Nostoc punctiforme PCC 73102]
 gi|186463141|gb|ACC78942.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1716

 Score = 96.6 bits (239), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 56/331 (16%), Positives = 114/331 (34%), Gaps = 31/331 (9%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
            +S       I +  +    + W+    + ++ G +         V F      D + +  
Sbjct: 1328 VSFSRDGNTIASASTDETIKLWSF---EGVLLGTLKGHNNWVNSVSFS----PDGRTLAS 1380

Query: 142  KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRD 199
                 +   W        D + +    +  D+ + I F  +     +G    ++ +  R+
Sbjct: 1381 ASRDKTIKLWHW-----DDVLLRKPKADNDDWITSISFSPDDRTLAAGSRDKTIKLFSRE 1435

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G  +R +       ++   FSP+ Q +A A+ D      V L      +    +    S 
Sbjct: 1436 GKLLR-ILTGHQGQVWGVSFSPDGQAIASASKDQ----TVKLWGAD-GKLLNTLQGHNST 1489

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            +L+  +S N  + + S  KD+ + ++S D        L          S+SPD   +   
Sbjct: 1490 VLSVAWSPN-SQIIASASKDQTVKLWSRD--GKLLNTLQGHKDAVNWVSFSPDGKLLASA 1546

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            SD    + + +   +G     +            WSP   +IA          + +  +D
Sbjct: 1547 SD---DKTVKIWSLDGKLLYTLI-GHSRRVNGVSWSPDSQVIASVSIDST---VQLWSRD 1599

Query: 380  GSQERLLVEDSN-LQAPTWSPSGRSLIFSRK 409
            G     L  D +   + ++SP G++L  S  
Sbjct: 1600 GGLLNTLTGDGDSFISVSFSPDGKTLAASSD 1630



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 89/242 (36%), Gaps = 19/242 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++ S     ++ +   D   +R      D  +    FSP+ + +A  + D     +   
Sbjct: 1376 RTLASASRDKTIKLWHWDDVLLRKPKADNDDWITSISFSPDDRTLAAGSRD-----KTIK 1430

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            + +R  +  + +   +  +    FS +G+    S  KD+ + ++  D        L    
Sbjct: 1431 LFSREGKLLRILTGHQGQVWGVSFSPDGQAIA-SASKDQTVKLWGAD--GKLLNTLQGHN 1487

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +S ++SP+S  I   S    K+Q   + S         Q  + +     +SP G L+
Sbjct: 1488 STVLSVAWSPNSQIIASAS----KDQTVKLWSRDGKLLNTLQGHKDAVNWVSFSPDGKLL 1543

Query: 362  AFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A +    +   I     DG     L+     +   +WSP  + +        D+  +L+S
Sbjct: 1544 A-SASDDKTVKIW--SLDGKLLYTLIGHSRRVNGVSWSPDSQVIASVSI---DSTVQLWS 1597

Query: 421  ID 422
             D
Sbjct: 1598 RD 1599



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 88/236 (37%), Gaps = 20/236 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ +   DG+ +       + ++    FSP+ Q +A A+ D      V L    
Sbjct: 1134 SASADTTIKLWLPDGS-LFKTLSGHEDVVNSVSFSPDGQIIASASQDK----TVKLWSRE 1188

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                   +G  + ++ +  FS +G+    S   D+ + ++S D      + L       +
Sbjct: 1189 GVLLVTLLG-HQGVVNSVSFSPDGQIIA-SASTDKTVKLWSRD--GKLLKTLPGHDGAVL 1244

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S ++S D   I   S     + + +   +G   K + Q  E +     WS  G  IA   
Sbjct: 1245 SVAWSTDGQTIASGS---ADKTVKLWSRDGKLLKTL-QGHEDAVKSVAWSTDGQTIASAS 1300

Query: 366  FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                   I +   +G   R L    + + + ++S  G ++  +     D   KL+S
Sbjct: 1301 LDQT---IKLWNLEGKLLRTLSGHSAGVTSVSFSRDGNTIASAST---DETIKLWS 1350



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 101/305 (33%), Gaps = 69/305 (22%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ +  RDG  ++ L P  D  +    +S + Q +A  + D    ++++   +R
Sbjct: 1216 SASTDKTVKLWSRDGKLLKTL-PGHDGAVLSVAWSTDGQTIASGSAD--KTVKLW---SR 1269

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +  K +      + +  +S++G+    S   D+ + ++  +L+      L+       
Sbjct: 1270 DGKLLKTLQGHEDAVKSVAWSTDGQTIA-SASLDQTIKLW--NLEGKLLRTLSGHSAGVT 1326

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S S+S D + I   S     E + +    G     + +          +SP G  +A   
Sbjct: 1327 SVSFSRDGNTIASAST---DETIKLWSFEGVLLGTL-KGHNNWVNSVSFSPDGRTLASAS 1382

Query: 366  FS---------------------------------------GEKFAIGVMKKDGSQERLL 386
                                                          I +  ++G   R+L
Sbjct: 1383 RDKTIKLWHWDDVLLRKPKADNDDWITSISFSPDDRTLAAGSRDKTIKLFSREGKLLRIL 1442

Query: 387  V-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID------LNGRNETLINTPAYASD 439
                  +   ++SP G+++  + K   D   KL+  D      L G N T+++       
Sbjct: 1443 TGHQGQVWGVSFSPDGQAIASASK---DQTVKLWGADGKLLNTLQGHNSTVLSV------ 1493

Query: 440  PQWVG 444
              W  
Sbjct: 1494 -AWSP 1497



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 83/224 (37%), Gaps = 24/224 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ +   DG  +       +  +    +SPN Q +A A+ D             
Sbjct: 1463 SASKDQTVKLWGADGK-LLNTLQGHNSTVLSVAWSPNSQIIASASKDQ--------TVKL 1513

Query: 246  IDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
              R  K +   +    A     FS +GK    S   D+ + I+S+D        L     
Sbjct: 1514 WSRDGKLLNTLQGHKDAVNWVSFSPDGKLLA-SASDDKTVKIWSLD--GKLLYTLIGHSR 1570

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 S+SPDS  I   S       + +   +G     ++ D + S+    +SP G  +A
Sbjct: 1571 RVNGVSWSPDSQVIASVSI---DSTVQLWSRDGGLLNTLTGDGD-SFISVSFSPDGKTLA 1626

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
             +        I +  ++G+    L   ++ L + ++SP G++L 
Sbjct: 1627 ASSDD----KIRIWNREGTLLIALKGYEAELTSVSFSPDGKTLA 1666



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 75/189 (39%), Gaps = 14/189 (7%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S+ + S     ++ +  RDG  +  L   +D + +   FSP+ + +A A+ D      V 
Sbjct: 1499 SQIIASASKDQTVKLWSRDGKLLNTLQGHKDAVNWV-SFSPDGKLLASASDDK----TVK 1553

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +           IG+ R +     +S + +    SV  D  + ++S D        LT  
Sbjct: 1554 IWSLDGKLLYTLIGHSRRVN-GVSWSPDSQVIA-SVSIDSTVQLWSRD--GGLLNTLTGD 1609

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                IS S+SPD   +   SD    +++ +    G+    + +  EA      +SP G  
Sbjct: 1610 GDSFISVSFSPDGKTLAASSD----DKIRIWNREGTLLIAL-KGYEAELTSVSFSPDGKT 1664

Query: 361  IAFTKFSGE 369
            +A    +G 
Sbjct: 1665 LAAGSGNGT 1673



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 89/235 (37%), Gaps = 21/235 (8%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G             +    FSP++  +A A+ D    ++++L D       K +     +
Sbjct: 1106 GLREYNRLEGHLSGVNNATFSPDRSLIASASADT--TIKLWLPD---GSLFKTLSGHEDV 1160

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + +  FS +G+    S  +D+ + ++S   +      L     +  S S+SPD   I   
Sbjct: 1161 VNSVSFSPDGQIIA-SASQDKTVKLWS--REGVLLVTLLGHQGVVNSVSFSPDGQIIASA 1217

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            S     + + +   +G   K +    + +     WS  G  IA          + +  +D
Sbjct: 1218 ST---DKTVKLWSRDGKLLKTL-PGHDGAVLSVAWSTDGQTIASGSADKT---VKLWSRD 1270

Query: 380  GSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            G   + L    + +++  WS  G+++  +     D   KL+  +L G+    ++ 
Sbjct: 1271 GKLLKTLQGHEDAVKSVAWSTDGQTIASASL---DQTIKLW--NLEGKLLRTLSG 1320



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 71/201 (35%), Gaps = 15/201 (7%)

Query: 224  QKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            Q++ +  +Y  E +           R   R+    S +    FS + +  + S   D  +
Sbjct: 1083 QQIVWVDSYTREQVQTALYQAVSGLREYNRLEGHLSGVNNATFSPD-RSLIASASADTTI 1141

Query: 283  DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
             ++  D   +  + L+    +  S S+SPD   I   S     ++   + S         
Sbjct: 1142 KLWLPD--GSLFKTLSGHEDVVNSVSFSPDGQIIASASQ----DKTVKLWSREGVLLVTL 1195

Query: 343  QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSG 401
               +       +SP G +IA          + +  +DG   + L   D  + +  WS  G
Sbjct: 1196 LGHQGVVNSVSFSPDGQIIASASTDKT---VKLWSRDGKLLKTLPGHDGAVLSVAWSTDG 1252

Query: 402  RSLIFSRKKDGDTGSKLYSID 422
            +++        D   KL+S D
Sbjct: 1253 QTIA---SGSADKTVKLWSRD 1270



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 14/150 (9%)

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            RL   L    +A++SPD S I   S       + +   +GS  K +S   E       +S
Sbjct: 1112 RLEGHLSGVNNATFSPDRSLIASAS---ADTTIKLWLPDGSLFKTLS-GHEDVVNSVSFS 1167

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            P G +IA          + +  ++G     LL     + + ++SP G+ +  +     D 
Sbjct: 1168 PDGQIIASASQDKT---VKLWSREGVLLVTLLGHQGVVNSVSFSPDGQIIASAST---DK 1221

Query: 415  GSKLYSIDLNGR-NETLINTPAYASDPQWV 443
              KL+S   +G+  +TL           W 
Sbjct: 1222 TVKLWS--RDGKLLKTLPGHDGAVLSVAWS 1249


>gi|305667381|ref|YP_003863668.1| putative peptidase/protease family protein [Maribacter sp.
           HTCC2170]
 gi|88709429|gb|EAR01662.1| putative peptidase/protease family protein [Maribacter sp.
           HTCC2170]
          Length = 1081

 Score = 96.2 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 121/332 (36%), Gaps = 42/332 (12%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +DV   +  +   F       R   ++   +    ++ E G FN   + +     +  + 
Sbjct: 202 FDVSSGEHKMITSFAGED---RNPVYSQDQNTVYYLSEESGTFNVHKMSLENPTQNERLT 258

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL-MDTRIDRA 249
           +            ++   S         FS + +   Y   D E+  +V + + T+    
Sbjct: 259 SL----------AKHPVRSLSIGAGTMAFSYDGE--LYTLKDGEEPNKVQINIRTQAGTN 306

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +  + +  +     S +GK+     +     +++   ++++ T+RLTNT        +
Sbjct: 307 SDKFVSIKGGVQEMDISPDGKQIAFISRG----EVFVTSVENSLTKRLTNTPEQERFVKF 362

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQ----------KRISQDKEASYFDPVWSPQGD 359
           + D   + + S+R GK  +Y  +    ++          +          + P +SP G+
Sbjct: 363 THDGKAVAYSSERNGKWSIYQTKKVRKEEPFFYGSTLVKEETLVSSNMDVYLPEFSPDGN 422

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDG 412
            +AF +    +  + VM     + + L+   +L   +       WSP  + L+       
Sbjct: 423 SVAFIE---GRRTLKVMNLKTKETKTLLTPKDLFHMSDGDKYFKWSPDSKWLL-VSWAAS 478

Query: 413 DTGSKLYSIDLNG-RNETLINTPAYASDPQWV 443
            +  ++  +  +G + E L  +  Y   P+WV
Sbjct: 479 LSNGEILMLAADGSKRENLTESGYYDFYPKWV 510



 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 81/247 (32%), Gaps = 33/247 (13%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             Q +  P  SP+   +A+      ++  V            ++    +   A  +S +G
Sbjct: 22  NPQWVRYPSISPDGSVIAFTY--KGNLYSV----ATSGGDATQLTFHEAHDYATIWSKDG 75

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------- 322
           K    +  +    D++++D +     RLT         ++S D S++ F + R       
Sbjct: 76  KTLSFASNRYGNFDVFTMDAKGGPATRLTFHSNNERPYTFSADDSEVFFGAQRQDDVAHR 135

Query: 323 ----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKF 366
                 + +LY +   G   +++         D   +  G  + +               
Sbjct: 136 QYPTGSQPELYAVSKEGGRVRQVLTLP---IEDVQVNNNGSQLIYHDKKGYEDEFRKHHV 192

Query: 367 SGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           S     +        + +++       + P +S    ++ +  ++ G       S++   
Sbjct: 193 SSITRDVWTFDVSSGEHKMITSFAGEDRNPVYSQDQNTVYYLSEESGTFNVHKMSLENPT 252

Query: 426 RNETLIN 432
           +NE L +
Sbjct: 253 QNERLTS 259



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 74/209 (35%), Gaps = 28/209 (13%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              +  P  S +G     + + +    +YSV        +LT     + +  +S D   +
Sbjct: 23  PQWVRYPSISPDGSVIAFTYKGN----LYSVATSGGDATQLTFHEAHDYATIWSKDGKTL 78

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--------- 367
            F S+R G   ++ M + G    R++     +     +S     + F             
Sbjct: 79  SFASNRYGNFDVFTMDAKGGPATRLTFHSN-NERPYTFSADDSEVFFGAQRQDDVAHRQY 137

Query: 368 --GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD----------GDTG 415
             G +  +  + K+G + R ++    ++    + +G  LI+  KK               
Sbjct: 138 PTGSQPELYAVSKEGGRVRQVLTLP-IEDVQVNNNGSQLIYHDKKGYEDEFRKHHVSSIT 196

Query: 416 SKLYSIDL-NGRNETLINTPAYASDPQWV 443
             +++ D+ +G ++ + +      +P + 
Sbjct: 197 RDVWTFDVSSGEHKMITSFAGEDRNPVYS 225



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 65/187 (34%), Gaps = 10/187 (5%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
           + K+  ++P   R +  T         +   G ++           +  ++         
Sbjct: 346 LTKRLTNTPEQERFVKFTHDGKAVAYSSERNGKWSIY--------QTKKVRKEEPFFYGS 397

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRS 258
                    S +  ++ P FSP+   VA+        ++ +   +T+    PK + +   
Sbjct: 398 TLVKEETLVSSNMDVYLPEFSPDGNSVAFIEGRRTLKVMNLKTKETKTLLTPKDLFHMSD 457

Query: 259 MILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                ++S + K  L+S        +I  +    +  E LT + + +    +     Q++
Sbjct: 458 GDKYFKWSPDSKWLLVSWAASLSNGEILMLAADGSKRENLTESGYYDFYPKWVNGGEQMI 517

Query: 318 FESDREG 324
           + ++R G
Sbjct: 518 WFANRHG 524



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 62/168 (36%), Gaps = 21/168 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTR---------IDRAPKRIGNFRSMILAPRFSSN 268
           +F+ + + VAY++  +           R              + + +    +  P FS +
Sbjct: 361 KFTHDGKAVAYSSERNGKWSIYQTKKVRKEEPFFYGSTLVKEETLVSSNMDVYLPEFSPD 420

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDR 322
           G         +    +  ++L++  T+ L     +      +    +SPDS  ++     
Sbjct: 421 GNSVAFI---EGRRTLKVMNLKTKETKTLLTPKDLFHMSDGDKYFKWSPDSKWLLVSWAA 477

Query: 323 E-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKFSG 368
                ++ ++ ++GS ++ +++     ++ P W   G  +I F    G
Sbjct: 478 SLSNGEILMLAADGSKRENLTESGYYDFY-PKWVNGGEQMIWFANRHG 524


>gi|218960474|ref|YP_001740249.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729131|emb|CAO80042.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 1006

 Score = 96.2 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 90/256 (35%), Gaps = 29/256 (11%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D    E R+    ++  Y   +  DI    + +       K+ G++    LAPRFS NG 
Sbjct: 249 DFEDLESRWHYKLKRDYYPLINSHDIP---MENFEQRTFHKKDGSY--FNLAPRFSPNGS 303

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTN----------TLFINISASYSPDSSQIVFES 320
           R +          I+    Q  A  +L              ++  + S+ PD+ +I F +
Sbjct: 304 RYVYYSNAGGRYSIWLAGTQGLAQPQLIFKGEKSGKAEEFYYLRSALSWFPDNQRIAFSA 363

Query: 321 DREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                +++ ++  N     + IS  +  + ++   SP G  +        +  + + + +
Sbjct: 364 KTATGDKIQILNVNTKKIVQTISIPELQAIYEADVSPDGLFLVLAGQKNMQSDLYLYEIE 423

Query: 380 GSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKD-----------GDTGSKLYSIDL-NGR 426
             +   L +DS     P +SP G+ + +  +              D    +++ ++  G 
Sbjct: 424 TGKLTQLTDDSYDDAHPRFSPDGKYIAYDSEHKCEKQEISYGLFSDLTRDIFTFNIETGE 483

Query: 427 NETLINTPAYASDPQW 442
                        P W
Sbjct: 484 IVERTFENYDCFSPIW 499



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 93/252 (36%), Gaps = 29/252 (11%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQ------ 212
           D  Y ++        SR ++ S +      + S+ +    G A  + +            
Sbjct: 288 DGSYFNLAPRFSPNGSRYVYYSNAGG----RYSIWLAGTQGLAQPQLIFKGEKSGKAEEF 343

Query: 213 --ILFEPRFSPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             +     + P+ Q++A++      D +++  ++T+       I   +++  A   S +G
Sbjct: 344 YYLRSALSWFPDNQRIAFSAKTATGDKIQILNVNTKKIVQTISIPELQAIYEA-DVSPDG 402

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------- 321
              +++ QK+   D+Y  ++++    +LT+  + +    +SPD   I ++S+        
Sbjct: 403 LFLVLAGQKNMQSDLYLYEIETGKLTQLTDDSYDDAHPRFSPDGKYIAYDSEHKCEKQEI 462

Query: 322 -----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                 +    ++       +    + +     F P+W+  G  + F  +        ++
Sbjct: 463 SYGLFSDLTRDIFTFNIETGEIVERTFE-NYDCFSPIWAEDGSKLVFLSYKYNLANYEIL 521

Query: 377 KKDGSQERLLVE 388
             +  Q   L +
Sbjct: 522 DWETGQRAELTK 533



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 27/235 (11%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---------GNFRSM 259
                   PRFSPN  +  Y + +      ++L  T+    P+ I           F  +
Sbjct: 288 DGSYFNLAPRFSPNGSRYVYYS-NAGGRYSIWLAGTQGLAQPQLIFKGEKSGKAEEFYYL 346

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIV 317
             A  +  + +R   S +      I  +++ +    +  +   +     A  SPD   +V
Sbjct: 347 RSALSWFPDNQRIAFSAKTATGDKIQILNVNTKKIVQTISIPELQAIYEADVSPDGLFLV 406

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------------ 365
               +  +  LY+ +       +++ D       P +SP G  IA+              
Sbjct: 407 LAGQKNMQSDLYLYEIETGKLTQLTDDS-YDDAHPRFSPDGKYIAYDSEHKCEKQEISYG 465

Query: 366 -FSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            FS     I     +  +      E+ +  +P W+  G  L+F   K      ++
Sbjct: 466 LFSDLTRDIFTFNIETGEIVERTFENYDCFSPIWAEDGSKLVFLSYKYNLANYEI 520



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 61/181 (33%), Gaps = 21/181 (11%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            IY++     G F               +++ L + + +   +  LT         PRFS
Sbjct: 392 AIYEADVSPDGLFL-------VLAGQKNMQSDLYLYEIETGKLTQLTDD-SYDDAHPRFS 443

Query: 221 PNQQKVAYATYDD------------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           P+ + +AY +               +    ++  +       +R         +P ++ +
Sbjct: 444 PDGKYIAYDSEHKCEKQEISYGLFSDLTRDIFTFNIETGEIVER-TFENYDCFSPIWAED 502

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G + +    K    +   +D ++     LT  +   ++   S D S +V     +G   +
Sbjct: 503 GSKLVFLSYKYNLANYEILDWETGQRAELTKCIAGIMNGDISFDDSYLVISDYFDGAWDI 562

Query: 329 Y 329
           Y
Sbjct: 563 Y 563


>gi|242805002|ref|XP_002484485.1| WD-repeat protein, putative [Talaromyces stipitatus ATCC 10500]
 gi|218717830|gb|EED17251.1| WD-repeat protein, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1034

 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 96/265 (36%), Gaps = 13/265 (4%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           DD  Q++    G   S        + +     ++ + D D      +       ++   F
Sbjct: 5   DDCTQTLHAHSGKIYSVAFSPDNRLAAYSEGKNVTIWDLDNDKRLNIFTGHGDYVYSIAF 64

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ ++VA  + D      + + D   D+      +    + +  FS +GKR   S  KD
Sbjct: 65  SPDGKRVASGSKDK----TIKVWDLDSDKCLNTFTDHEDYVYSVAFSPDGKRVA-SGSKD 119

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + + ++ +D         T+      S ++SPD  ++   S     + + +   N +   
Sbjct: 120 KTIKVWDLDSD-KCLNTFTDHEDYVYSVAFSPDGKRVASGSK---DKTIKIWDLNRNSSP 175

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           +  +          +S  G  +A +    +   I  +      +        +++  +SP
Sbjct: 176 KTLKGHSDHVNSVAFSFDGARLA-SASDDKTIKIWHINSGRCFKTFEGHTKPVRSAVFSP 234

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLN 424
            G S+        DT  K+++ID +
Sbjct: 235 DGTSIA---SGSEDTMMKIWNIDRD 256



 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 88/240 (36%), Gaps = 15/240 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V SG   N++ + + DG          D+ +    FSP+ ++VA  + D      V + 
Sbjct: 322 RVASGSDDNTIKIWNADG--CLKTFNGHDEAVRSVAFSPDGKRVASGSVDQ----TVKIW 375

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D   D   K        + +  F+ NG     S   D+ + I+ VD      + LT    
Sbjct: 376 DLSNDECLKTFTGHGGWVRSVAFAPNGTYLA-SGSDDQTVKIWDVDSD-KCLKTLTGHKD 433

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++SP+ + +   S       + +   N  +      +         +SP G  + 
Sbjct: 434 YVYSVAFSPNGTHVASGSK---DNTVKIWDLNSENYIDTFNEHNDHIHSVAFSPDGTHVV 490

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +    +K  +  +  + S +      + +++  +SP G  L  S     D   K++ ID
Sbjct: 491 -SGSDDKKVKLWNINSNISLKTFEGHTNGIRSVAYSPDGTFLASSSD---DRTIKIWHID 546



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 59/314 (18%), Positives = 105/314 (33%), Gaps = 42/314 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G  +  G D   V  ++WDV   K +                H   D +Y       G  
Sbjct: 402 GTYLASGSDDQTV--KIWDVDSDKCLKTLT-----------GHK--DYVYSVAFSPNGTH 446

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     V SG   N++ + D +  N        +  +    FSP+   V   + D 
Sbjct: 447 ----------VASGSKDNTVKIWDLNSENYIDTFNEHNDHIHSVAFSPDGTHVVSGSDDK 496

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +    V L +   + + K      + I +  +S +G     S   D  + I+ +D     
Sbjct: 497 K----VKLWNINSNISLKTFEGHTNGIRSVAYSPDGTFLA-SSSDDRTIKIWHID-SGKC 550

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                       S +YSPD + +V  SD    + + +   NG    R       + F   
Sbjct: 551 FITFEGHNAGIRSVNYSPDGTHVVSGSD---DKVIKISYVNGGKCLRTFNGSFTNSF--A 605

Query: 354 WSPQGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           +SP G+ +A     +       I  +  +   + L      + + T+SPSG  L      
Sbjct: 606 FSPDGNHVASVLGFQTVDSTIKIWDLNCNSYLKTLRGHSKGVYSVTFSPSGTHLA---SG 662

Query: 411 DGDTGSKLYSIDLN 424
             D   K++ ++ +
Sbjct: 663 SADQTVKIWDLNND 676



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 86/245 (35%), Gaps = 17/245 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S+ SG     + + + D  +        +Q +    FS + ++VA  + D      + + 
Sbjct: 238 SIASGSEDTMMKIWNIDRDHCFKTFNGHNQGVESVAFSSDGKRVASGSDDK----TIKIW 293

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +     + K +      I +  FS NG R   S   D  + I++ D      +       
Sbjct: 294 NVHNRSSVKTLEGHSHSINSVAFSPNGTRVA-SGSDDNTIKIWNAD---GCLKTFNGHDE 349

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++SPD  ++   S     + + +   +  +  +             ++P G  +A
Sbjct: 350 AVRSVAFSPDGKRVASGSV---DQTVKIWDLSNDECLKTFTGHGGWVRSVAFAPNGTYLA 406

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +    +   I  +  D   + L      + +  +SP+G  +        D   K++  D
Sbjct: 407 -SGSDDQTVKIWDVDSDKCLKTLTGHKDYVYSVAFSPNGTHVA---SGSKDNTVKIW--D 460

Query: 423 LNGRN 427
           LN  N
Sbjct: 461 LNSEN 465



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 75/239 (31%), Gaps = 13/239 (5%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VVSG     + +   +G              F   FSP+   VA           + + D
Sbjct: 573 VVSGSDDKVIKISYVNGGKCLRTFNGSFTNSF--AFSPDGNHVASVLGFQTVDSTIKIWD 630

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
              +   K +      + +  FS +G     S   D+ + I+ ++      +  T     
Sbjct: 631 LNCNSYLKTLRGHSKGVYSVTFSPSGTHLA-SGSADQTVKIWDLN-NDECLKTFTGHGST 688

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S  +S + + +         +Q   +    SD+   +     S     +SP    +A 
Sbjct: 689 VRSVVFSSNGTYLA----SGSADQTVKIWKINSDECLKTFTHGGSVSSVAFSPNDIYLA- 743

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +    +   I  +   G   R L     + +  +SP  + +        D   K++  D
Sbjct: 744 SGSDDQMVKIWKIY-SGKCLRTLTHGGAVSSVAFSPDDKHMA---SGSSDKTVKIWDFD 798



 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 90/285 (31%), Gaps = 44/285 (15%)

Query: 167  TGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            T   G   S + F  +     SG    ++ + D D           ++ +    FSPN  
Sbjct: 764  TLTHGGAVSSVAFSPDDKHMASGSSDKTVKIWDFDNGQCLKTFKGHNRRVGSVAFSPNGT 823

Query: 225  KVAYATYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRAL---------- 273
             +A  + D    ++++ M +  D    K    + S +++  FSS+G R L          
Sbjct: 824  HLASGSED--QTVKIWDMSSNSDSNCLKTFEVYNSDVISVAFSSDGTRVLSGSLFGAVNI 881

Query: 274  ---------------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                            SV  D    ++  D+ S     +        S  +SP+ S I  
Sbjct: 882  WDNACLKALNGGTRIASVSDDRTFRVW--DVDSGVCLHIFEH-GRVSSIVFSPNGSSIAS 938

Query: 319  ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             SD    + + +      +     +          +SP    +A +    +   I     
Sbjct: 939  ASD---DKTIKIWDITSGNCLTTFKGHSDMVQSIAFSPDATRVA-SGSDDKMVKIW--DV 992

Query: 379  DGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            D            S + +  +SP G  ++       D   K++ +
Sbjct: 993  DSGNCLKTFNGHESMIMSVAFSPDGTRVV---SGSNDKTIKIWDV 1034



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 58/173 (33%), Gaps = 33/173 (19%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            R+     DR    FR+WDV                        +   I++        F+
Sbjct: 895  RIASVSDDR---TFRVWDVDSG---------------------VCLHIFEHGRVSSIVFS 930

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                    S+ S     ++ + D    N          ++    FSP+  +VA  + D  
Sbjct: 931  PN----GSSIASASDDKTIKIWDITSGNCLTTFKGHSDMVQSIAFSPDATRVASGSDDK- 985

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                V + D       K      SMI++  FS +G R ++S   D+ + I+ V
Sbjct: 986  ---MVKIWDVDSGNCLKTFNGHESMIMSVAFSPDGTR-VVSGSNDKTIKIWDV 1034


>gi|254416061|ref|ZP_05029817.1| Pentapeptide repeat protein [Microcoleus chthonoplastes PCC 7420]
 gi|196177236|gb|EDX72244.1| Pentapeptide repeat protein [Microcoleus chthonoplastes PCC 7420]
          Length = 1185

 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 56/320 (17%), Positives = 115/320 (35%), Gaps = 42/320 (13%)

Query: 128  FRLWDVKDRKQIIGK--------KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
             RLWDV+D + +               SP    +   + SDD    +   +     ++L 
Sbjct: 844  LRLWDVRDGQCLKALHGYTSGIWSVAVSPNG--EFLASGSDDFLARLWDSRSGECLKVLS 901

Query: 180  VSESVVSGIIKNS-------------LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
               + + G+  +              + + D +  +     P     ++   +SP+   +
Sbjct: 902  GHTNGIRGVTWSPDGRKIATGSLDACVRLWDVESGHCLLALPGHTGSIWTLVWSPDGHTL 961

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            A  ++D    L V L D +       +    S +    +S + +    +   D ++ ++ 
Sbjct: 962  ASGSHD----LSVRLWDAQTGVCRSVLQGHTSWVWTVAWSPDSRTLA-TGSFDFSIRLW- 1015

Query: 287  VDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             DL S  + +L         S ++SPDS  +   S     + + +   +  +  +     
Sbjct: 1016 -DLNSGQSWKLLQGHTGWVCSVAWSPDSCTLASGSH---DQTIRLWDVSTGECLKTWHSD 1071

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLV-EDSNLQAPTWSPSGRS 403
                +   WSP G ++A        F++ +          +L    S + + TWSP GR 
Sbjct: 1072 AGGVWVVAWSPNGRILA---SGNHDFSVRLWDTQTCEAITVLSGHTSWVYSVTWSPDGRI 1128

Query: 404  LIFSRKKDGDTGSKLYSIDL 423
            LI S +   D   K++ I+ 
Sbjct: 1129 LISSSQ---DETIKIWDINT 1145



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 64/354 (18%), Positives = 119/354 (33%), Gaps = 42/354 (11%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRK---QIIGKKFFSSPASWRKIAHTIS----------- 159
            GR I  G D   V  RLWDV + +      G   +    +W +  H ++           
Sbjct: 748  GRTIASGSDDKTV--RLWDVGNGRCLHVFQGHTEWIRSVAWSRDGHLLASSGFEPIVRLW 805

Query: 160  DDIYQSITGEKGDFNSRILFVS-----ESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQI 213
            D   +           RI  V+      ++ S     +L + D RDG  ++ L      I
Sbjct: 806  DIRNRRCLKILQGHTERIWSVAWSPDNRTIASASHDQTLRLWDVRDGQCLKALHGYTSGI 865

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             +    SPN + +A  + D        L D+R     K +    + I    +S +G++  
Sbjct: 866  -WSVAVSPNGEFLASGSDD----FLARLWDSRSGECLKVLSGHTNGIRGVTWSPDGRKIA 920

Query: 274  ISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +   D  + ++  D++S      L        +  +SPD   +   S       + +  
Sbjct: 921  -TGSLDACVRLW--DVESGHCLLALPGHTGSIWTLVWSPDGHTLASGSH---DLSVRLWD 974

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDS 390
            +     + + Q   +  +   WSP    +A   F    F+I +   +  Q   L+     
Sbjct: 975  AQTGVCRSVLQGHTSWVWTVAWSPDSRTLATGSFD---FSIRLWDLNSGQSWKLLQGHTG 1031

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             + +  WSP   +L        D   +L+ +      +T  +         W  
Sbjct: 1032 WVCSVAWSPDSCTLASGSH---DQTIRLWDVSTGECLKTWHSDAGGVWVVAWSP 1082



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 56/398 (14%), Positives = 122/398 (30%), Gaps = 64/398 (16%)

Query: 71  KDLQRSDVFN-------LISQDSFKQKITNPDSIPRFQDW---------NSLGAQVLVTG 114
            DL +S VF+       +++     +++   D     + W            G Q  V G
Sbjct: 557 ADLSKS-VFSETLSGVLVVAFSPDGKQVATGDVDGNVRLWQVADGKQLLTLKGHQGWVWG 615

Query: 115 RVIKEGKDRLRVEF------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            V      +           RLWDV++ + +             K  H  ++ ++     
Sbjct: 616 -VSFSPDGQTLASCSDDQTVRLWDVREGQCL-------------KAFHGHANGVWTVAFS 661

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G          +++ S  +  ++ + D            +   ++   +S + + +A 
Sbjct: 662 PDG----------QTLASSGLDPTVRLWDVGKGQCIKALEGQTSRIWSVAWSRDGRTIAS 711

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           +  D      + L D    +  K        + A  +S +G+    S   D+ + ++ V 
Sbjct: 712 SGLD----PAIRLWDVGNGQCIKAFHGHTDEVRAVVWSPDGRTIA-SGSDDKTVRLWDV- 765

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                            S ++S D   +        +  + +         +I Q     
Sbjct: 766 GNGRCLHVFQGHTEWIRSVAWSRDGHLLA---SSGFEPIVRLWDIRNRRCLKILQGHTER 822

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFS 407
            +   WSP    IA      +   +  ++ DG   + L    S + +   SP+G  L   
Sbjct: 823 IWSVAWSPDNRTIASASHD-QTLRLWDVR-DGQCLKALHGYTSGIWSVAVSPNGEFLASG 880

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
                D  ++L+    +G    +++          W  
Sbjct: 881 SD---DFLARLWD-SRSGECLKVLSGHTNGIRGVTWSP 914



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 59/178 (33%), Gaps = 32/178 (17%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        RLWD+   +                         ++ + G  G   S 
Sbjct: 1001 RTLATGSFDFSIRLWDLNSGQS------------------------WKLLQGHTGWVCSV 1036

Query: 177  ILFVSE-SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                   ++ SG    ++ + D           S    ++   +SPN + +A   +D   
Sbjct: 1037 AWSPDSCTLASGSHDQTIRLWDVSTGECLKTWHSDAGGVWVVAWSPNGRILASGNHD--- 1093

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               V L DT+   A   +    S + +  +S +G R LIS  +DE + I+  D+ +  
Sbjct: 1094 -FSVRLWDTQTCEAITVLSGHTSWVYSVTWSPDG-RILISSSQDETIKIW--DINTGE 1147


>gi|323702980|ref|ZP_08114637.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Desulfotomaculum nigrificans DSM 574]
 gi|323532111|gb|EGB21993.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Desulfotomaculum nigrificans DSM 574]
          Length = 464

 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 28/210 (13%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P  SP+ Q++         +L    M       P+          +P +S +G +   
Sbjct: 140 LYPAVSPDGQQILVVRGGRLVLLSASGMQVATLDPPE-----GGYFRSPTWSPDGHQVAF 194

Query: 275 SVQKDEA---MDIYSVDLQSNATE----------RLTNTLFINISASYSPDSSQIVFESD 321
            V          +  V+L S  ++          +     +   + ++SP    + +   
Sbjct: 195 VVGSHGVEEIQQLPVVNLTSGGSKFSNLKPKDNSQWAKPAWHYANLTFSPGGDTLAYVVK 254

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDG 380
           R G+     ++      + ++Q        P WSP G  +   +   E  + + ++    
Sbjct: 255 RAGEPAEVWVKPITGQARLVTQGDY-----PAWSPDGKHLVVQQPDKENSYVLYLVDIKT 309

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              +LL      + PTWS +G  L F  +K
Sbjct: 310 GDTQLL---GPGERPTWSKNG-YLAFVTQK 335



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 66/361 (18%), Positives = 131/361 (36%), Gaps = 60/361 (16%)

Query: 81  LISQDSFKQKITN--PDSIPRFQDWNSLGAQVLVT--GRVIKEGKDRLRVEFRLWDVKDR 136
           ++      Q+IT    +  P +   +  G Q+LV   GR++      ++V     D  + 
Sbjct: 120 ILQPVGLPQEITRFWAEDQPLYPAVSPDGQQILVVRGGRLVLLSASGMQVA--TLDPPEG 177

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
                  +F SP +W    H ++      + G  G    + L V      G   ++L   
Sbjct: 178 G------YFRSP-TWSPDGHQVA-----FVVGSHGVEEIQQLPVVNLTSGGSKFSNLKPK 225

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D    N ++  P+         FSP    +AY      +   V++            G++
Sbjct: 226 D----NSQWAKPAWHYANL--TFSPGGDTLAYVVKRAGEPAEVWVKPITGQARLVTQGDY 279

Query: 257 RSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                 P +S +GK  ++    K+ +  +Y VD+++  T+ L          ++S +   
Sbjct: 280 ------PAWSPDGKHLVVQQPDKENSYVLYLVDIKTGDTQLL----GPGERPTWSKNG-Y 328

Query: 316 IVFESDREGKEQLYVMQSNGSDQ----------KRISQDKEASYF------DPVWSPQGD 359
           + F + +  +E++     +G  Q          + +    + S           W    +
Sbjct: 329 LAFVTQKT-QERILTFMPDGEPQYSVRQQVPEIRAVYLGNDGSAISKRLRQGQDWLAGSN 387

Query: 360 LIAFTKFSGEKFAIGV---MKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           L+           I      + DGS E    +L E +  +   + P G+ L+F+R ++GD
Sbjct: 388 LLVAAPNQVSGLEINWLRQQEMDGSGEPKTLVLKEINQCEGQVFGPDGKWLLFAR-RNGD 446

Query: 414 T 414
           T
Sbjct: 447 T 447



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 25/169 (14%)

Query: 292 NATERLTNTLFINIS--ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
              + +T     +     + SPD  QI+    R G  +L ++ ++G     +   +   +
Sbjct: 125 GLPQEITRFWAEDQPLYPAVSPDGQQILVV--RGG--RLVLLSASGMQVATLDPPEGGYF 180

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIG---VMKKDGSQER----LLVEDSNLQAPTW----- 397
             P WSP G  +AF   S     I    V+       +       ++S    P W     
Sbjct: 181 RSPTWSPDGHQVAFVVGSHGVEEIQQLPVVNLTSGGSKFSNLKPKDNSQWAKPAWHYANL 240

Query: 398 --SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             SP G +L +  K+ G+  ++++   + G  +  + T      P W  
Sbjct: 241 TFSPGGDTLAYVVKRAGEP-AEVWVKPITG--QARLVTQGDY--PAWSP 284


>gi|312200184|ref|YP_004020245.1| hypothetical protein FraEuI1c_6393 [Frankia sp. EuI1c]
 gi|311231520|gb|ADP84375.1| WD40 repeat, subgroup [Frankia sp. EuI1c]
          Length = 527

 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 88/241 (36%), Gaps = 18/241 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +    FSP+   +   + D+       L D    +    +     ++ +  F
Sbjct: 186 VLTGHTHEVNTGSFSPDGLLLVTTSRDN----TARLWDVATGQQRAVLSGHTGVVWSVDF 241

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G   L++   D    ++ V         LT        A++SP   QIV  S  +G 
Sbjct: 242 SPDGA-LLVTSSWDGTARLWDV-ATGRQRAVLTGHTGPVWWAAFSPSGDQIV-TSSVDGT 298

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            + +    + + Q+R+      + +   +SP G L+A T   G    +  +     +  L
Sbjct: 299 ARCW--DPSTARQQRVLTGHINTVYWAGYSPDGTLLATTSKDGNA-RLWEVATGRQRAVL 355

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-WVG 444
                 + A  +SP    L+ + +   D  ++L+ +      E   +   + +DP  W G
Sbjct: 356 TSHTDPIWAGAFSPDSTLLLTTSR---DKTARLWDV---ATGEQRFSLSGH-TDPVPWGG 408

Query: 445 F 445
           F
Sbjct: 409 F 409



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 104/319 (32%), Gaps = 45/319 (14%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWDV   +Q       +                         DF+     +  S   G 
Sbjct: 216 RLWDVATGQQRAVLSGHTG-------------------VVWSVDFSPDGALLVTSSWDGT 256

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +    + D      R +       ++   FSP+  ++  ++ D          D    R
Sbjct: 257 AR----LWDVATGRQRAVLTGHTGPVWWAAFSPSGDQIVTSSVDG----TARCWDPSTAR 308

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             + +    + +    +S +G     +  KD    ++ V         LT+      + +
Sbjct: 309 QQRVLTGHINTVYWAGYSPDGTLLA-TTSKDGNARLWEV-ATGRQRAVLTSHTDPIWAGA 366

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPDS+ ++  S R+   +L+       +Q+              +SP G LIA T    
Sbjct: 367 FSPDSTLLLTTS-RDKTARLW--DVATGEQRFSLSGHTDPVPWGGFSPDGTLIATTSRDK 423

Query: 369 EKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +      +++ ++          ++SP G  L+ + +   D  ++L+ +   G 
Sbjct: 424 TA---RLWDAATGKQKAVLTGHTDPVWFASFSPDGTLLVTTSR---DKTARLWDV-ATGE 476

Query: 427 NETLINTPAYASDP-QWVG 444
              ++      ++P  W  
Sbjct: 477 QRAILT---GHTEPVAWGA 492



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 62/345 (17%), Positives = 108/345 (31%), Gaps = 50/345 (14%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG------RVIKEGKDRLRVE- 127
            +  F+    D      T+ D+  R  D  +   + +++G       V       L V  
Sbjct: 195 NTGSFSP---DGLLLVTTSRDNTARLWDVATGQQRAVLSGHTGVVWSVDFSPDGALLVTS 251

Query: 128 -----FRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS-DDIYQSITGEKGDFNSRILFVS 181
                 RLWDV   +Q       + P  W   A + S D I  S                
Sbjct: 252 SWDGTARLWDVATGRQRAVLTGHTGPVWW--AAFSPSGDQIVTSSVDGTARCWDPSTARQ 309

Query: 182 ESVVSGIIKNSLCV-MDRDG-------------------ANIRYLTPSRDQILFEPRFSP 221
           + V++G I          DG                      R +  S    ++   FSP
Sbjct: 310 QRVLTGHINTVYWAGYSPDGTLLATTSKDGNARLWEVATGRQRAVLTSHTDPIWAGAFSP 369

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   +   + D        L D         +      +    FS +G     +  +D+ 
Sbjct: 370 DSTLLLTTSRDK----TARLWDVATGEQRFSLSGHTDPVPWGGFSPDGTLIA-TTSRDKT 424

Query: 282 MDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             ++  D  +   +  LT        AS+SPD + +V  S R+   +L+       +Q+ 
Sbjct: 425 ARLW--DAATGKQKAVLTGHTDPVWFASFSPDGTLLVTTS-RDKTARLW--DVATGEQRA 479

Query: 341 I-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           I +   E   +   ++P GD++A            V   D  + R
Sbjct: 480 ILTGHTEPVAWGAAFTPDGDILATLSADRTVRLWAVGSSDAPRPR 524



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 4/118 (3%)

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 LT       + S+SPD   +V  S R+   +L+        Q+ +        +
Sbjct: 181 GTPLAVLTGHTHEVNTGSFSPDGLLLVTTS-RDNTARLW--DVATGQQRAVLSGHTGVVW 237

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
              +SP G L+  + + G    +  +     +  L      +    +SPSG  ++ S 
Sbjct: 238 SVDFSPDGALLVTSSWDGTA-RLWDVATGRQRAVLTGHTGPVWWAAFSPSGDQIVTSS 294


>gi|45934815|gb|AAS79479.1| hypothetical protein [Streptomyces bikiniensis]
          Length = 1066

 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 85/244 (34%), Gaps = 25/244 (10%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---KD 279
             ++ +A+  DE   ++YL          R+ +       PR + +G   L         
Sbjct: 90  GDRLVFASRRDEKHPQIYLRGADGGVL--RLTSGLDAAR-PRLTPDGGSVLFDAADPAGG 146

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSD 337
              D++ V        RLT+T       + SPD ++I + SD +     Q+YV    G  
Sbjct: 147 SQRDLWLVRTDGTGLTRLTDTPASEEDPAVSPDGARIAYSSDADPLAGRQIYVRALTGGI 206

Query: 338 QKRISQDKEASYFDPVWSP-----QGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDS 390
             R++     +  +P W+P         IA+T  +    +    +   DG+ +  L   +
Sbjct: 207 PTRLTDPARGTASEPAWNPVDDDVNRAWIAYTSTTTEDGRTRQRLRITDGTTDETLFTGA 266

Query: 391 NLQA----PTWSPSGRSLIFSRKKDGDTGSKLY------SIDLNGRNETLINTPAYASDP 440
                     W P G  ++F   +   T    Y       +  +     +++       P
Sbjct: 267 YANWQGHGAAWLPDGDGIVFLSPETTCTCRTPYDHVFRSVVHADREPSLVLDEDRDVLSP 326

Query: 441 QWVG 444
            W+G
Sbjct: 327 TWIG 330



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 12/149 (8%)

Query: 303 INISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +     S    ++VF S R+ K  Q+Y+  ++G    R++   +A+   P  +P G  +
Sbjct: 82  YDTDP--SALGDRLVFASRRDEKHPQIYLRGADGG-VLRLTSGLDAAR--PRLTPDGGSV 136

Query: 362 AFTKFS---GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            F       G +  + +++ DG+    L +  ++ + P  SP G  + +S   D   G +
Sbjct: 137 LFDAADPAGGSQRDLWLVRTDGTGLTRLTDTPASEEDPAVSPDGARIAYSSDADPLAGRQ 196

Query: 418 LYSIDLNGRNETLINTP--AYASDPQWVG 444
           +Y   L G   T +  P    AS+P W  
Sbjct: 197 IYVRALTGGIPTRLTDPARGTASEPAWNP 225



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 85/251 (33%), Gaps = 27/251 (10%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            +      R++F S           + +   DG  +R            PR +P+   V 
Sbjct: 84  TDPSALGDRLVFASRR---DEKHPQIYLRGADGGVLRLT---SGLDAARPRLTPDGGSVL 137

Query: 228 YATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDI 284
           +   D     +  L   R D     R+ +  +    P  S +G R   S   D      I
Sbjct: 138 FDAADPAGGSQRDLWLVRTDGTGLTRLTDTPASEEDPAVSPDGARIAYSSDADPLAGRQI 197

Query: 285 YSVDLQSNATERLTN-TLFINISASYSP-----DSSQIVFES--DREGKEQLYVMQSNGS 336
           Y   L      RLT+         +++P     + + I + S    +G+ +  +  ++G+
Sbjct: 198 YVRALTGGIPTRLTDPARGTASEPAWNPVDDDVNRAWIAYTSTTTEDGRTRQRLRITDGT 257

Query: 337 DQKRISQDKEASYFDP--VWSPQGDLIAFTK-------FSGEKFAIG-VMKKDGSQERLL 386
             + +     A++      W P GD I F          +        V+  D     +L
Sbjct: 258 TDETLFTGAYANWQGHGAAWLPDGDGIVFLSPETTCTCRTPYDHVFRSVVHADREPSLVL 317

Query: 387 VEDSNLQAPTW 397
            ED ++ +PTW
Sbjct: 318 DEDRDVLSPTW 328



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 57/346 (16%), Positives = 112/346 (32%), Gaps = 72/346 (20%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D     +T + G      +    +  +G  +  L ++  DG  +  LT +      +P  
Sbjct: 123 DAARPRLTPDGGS-----VLFDAADPAGGSQRDLWLVRTDGTGLTRLTDTPAS-EEDPAV 176

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSS---NGKRALIS 275
           SP+  ++AY++  D    R   +       P R+ +  R     P ++    +  RA I+
Sbjct: 177 SPDGARIAYSSDADPLAGRQIYVRALTGGIPTRLTDPARGTASEPAWNPVDDDVNRAWIA 236

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINI------------SASYSPDSSQIVFES--- 320
                       D ++    R+T+                   A++ PD   IVF S   
Sbjct: 237 YTSTTTE-----DGRTRQRLRITDGTTDETLFTGAYANWQGHGAAWLPDGDGIVFLSPET 291

Query: 321 ---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW---SPQGDLIAFTKFSGEKFAIG 374
               R   + ++    +   +  +  D++     P W   +  G  I     +       
Sbjct: 292 TCTCRTPYDHVFRSVVHADREPSLVLDEDRDVLSPTWIGTAEGGHAIVERSSAATAHTAT 351

Query: 375 VMK--KDGSQERLLVEDSNLQAPT---------------------------WSPSGRSLI 405
           +     DGS  R L      + P                            ++P GR L+
Sbjct: 352 LQDIRADGSDPRDLQRKILREDPQADTNTDPAKDPLFQPAPPFDPWTERQNYTPDGRRLV 411

Query: 406 FSRKKDGDTGS--KLYSIDLNGRNETLINTPA-----YASDPQWVG 444
            +R +  D     ++++ D +G NE  +         + +DP +  
Sbjct: 412 LTRFEGPDDARIERIWTADADGTNEAPMPLDGRGARDWDTDPTFSP 457



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 77/216 (35%), Gaps = 42/216 (19%)

Query: 265 FSSNGKRALISVQKDEAM----DIYSVDLQSNATERLT----NTLFINISASYSPDSSQI 316
           ++ +G+R +++  +         I++ D        +          +   ++SPD +++
Sbjct: 403 YTPDGRRLVLTRFEGPDDARIERIWTADADGTNEAPMPLDGRGARDWDTDPTFSPDGTRL 462

Query: 317 VFESDREGK-------EQLYVMQSNGSDQKRIS-------QDKEASYFDPVWSPQGDLIA 362
            F     G         ++ + +       RI+        +       P WS  G  +A
Sbjct: 463 AFTRTSPGGVGEAAGDSRILLAEVATG---RITGEIVPPAGELRGGDAQPTWSSDGTTLA 519

Query: 363 FTKFS-----GEKFAIGVMK-KDGSQERLLVEDS-------NLQAPTWSPSGRSLIFSRK 409
           FT+       G    +      D +++R L              +P +SP GRSL F+RK
Sbjct: 520 FTRARQIAGGGGSKHVWTASTADLTRQRDLSATHCPRDCDVIDDSPAFSPDGRSLAFNRK 579

Query: 410 KDG---DTGSKLYSIDLNGRN-ETLINTPAYASDPQ 441
             G   D  + L    L+G   + L+ T A   D  
Sbjct: 580 NGGGRIDERNGLLLTTLSGDACQVLLPTAARGQDGA 615



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 92/293 (31%), Gaps = 65/293 (22%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRS---MILAPR 264
           D       ++P+ +++    ++  D   I R++  D           + R        P 
Sbjct: 395 DPWTERQNYTPDGRRLVLTRFEGPDDARIERIWTADADGTNEAPMPLDGRGARDWDTDPT 454

Query: 265 FSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNT--------LFINISASY 309
           FS +G R   +               I   ++ +    R+T             +   ++
Sbjct: 455 FSPDGTRLAFTRTSPGGVGEAAGDSRILLAEVATG---RITGEIVPPAGELRGGDAQPTW 511

Query: 310 SPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKR-IS-----QDKEASYFDPVWSPQG 358
           S D + + F   R      G + ++   +    ++R +S     +D +     P +SP G
Sbjct: 512 SSDGTTLAFTRARQIAGGGGSKHVWTASTADLTRQRDLSATHCPRDCDVIDDSPAFSPDG 571

Query: 359 DLIAFTKFSGEKF-----AIGVMKKDGSQERL---------------------LVEDSNL 392
             +AF + +G         + +    G   ++                     L      
Sbjct: 572 RSLAFNRKNGGGRIDERNGLLLTTLSGDACQVLLPTAARGQDGACERELPDTTLTGPHQP 631

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGS--KLYSIDLNGRNETLIN--TPAYASDPQ 441
           +   W+  G+ L+FS +      S  KL  +D+   + T +         +P 
Sbjct: 632 RDAAWTADGKRLVFSSRAAAAVNSPEKLNVLDVGSGDITPLTAELAGRQKEPT 684



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 4/121 (3%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQ 382
           G     + +   +D          +++D   S  GD + F     EK   I +   DG  
Sbjct: 56  GTGHRSLGEPASTDSSTPLFGAGPTHYDTDPSALGDRLVFASRRDEKHPQIYLRGADGGV 115

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIF-SRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDP 440
            R L    +   P  +P G S++F +    G +   L+ +  +G     L +TPA   DP
Sbjct: 116 LR-LTSGLDAARPRLTPDGGSVLFDAADPAGGSQRDLWLVRTDGTGLTRLTDTPASEEDP 174

Query: 441 Q 441
            
Sbjct: 175 A 175


>gi|68349585|gb|AAY96688.1| protein kinase/protein beta WD-40 repeat [uncultured bacterium
           BAC10-4]
          Length = 903

 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 102/267 (38%), Gaps = 10/267 (3%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           N  +++   +      +++L  +DR G  +   T   D   F+   SP+ + +       
Sbjct: 582 NGTLVYALPADDDKPQESTLTWVDRAGKELETFTLPFDLPFFQ--LSPDGESLV-VAGRA 638

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-N 292
             ++R  + D +                 P +  +G+  + S +     +++S  +    
Sbjct: 639 GSVVRTGIFDLKRKTLTGLFEFKDDFPSMPIWRPDGREIVFSRRTAVEAELWSQPVDGHA 698

Query: 293 ATERLTNTLFINISAS-YSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEA 347
             +RL  T    I    +SPD   ++  +      EG  +L  + ++ +  +R      A
Sbjct: 699 QPQRLWKTPASYIGPGGFSPDGRTLILMATDLRTAEGHLRLLDLTAHNAPVERPWFPTPA 758

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           + + P  SP G  +A+T     +  + V +      +  V  +    P WSP GR L F 
Sbjct: 759 TEWTPNLSPDGRWLAYTSMESGRSEVYVRRFPDGGAKSKVSVAGGGFPQWSPDGRELFFP 818

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTP 434
            +      +K+ ++D+      ++ TP
Sbjct: 819 AQPT-TATTKMMAVDVRTTPSLVLGTP 844



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 45/213 (21%), Positives = 73/213 (34%), Gaps = 16/213 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRF--SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           T +DRA K +  F      P F  S +G+  +++ +    +     DL+      L    
Sbjct: 602 TWVDRAGKELETFTLPFDLPFFQLSPDGESLVVAGRAGSVVRTGIFDLKRKTLTGL--FE 659

Query: 302 FINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQ 357
           F +   S   + PD  +IVF      + +L+    +G  Q +      ASY  P  +SP 
Sbjct: 660 FKDDFPSMPIWRPDGREIVFSRRTAVEAELWSQPVDGHAQPQRLWKTPASYIGPGGFSPD 719

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--W----SPSGRSLIFSRKKD 411
           G  +             +   D +     VE      P   W    SP GR L ++  + 
Sbjct: 720 GRTLILMATDLRTAEGHLRLLDLTAHNAPVERPWFPTPATEWTPNLSPDGRWLAYTSMES 779

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           G +   +      G    +         PQW  
Sbjct: 780 GRSEVYVRRFPDGGAKSKVSVAGG--GFPQWSP 810



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 74/195 (37%), Gaps = 20/195 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISV 276
            SP+  ++ Y      D L             +   +      A  P FS +G+      
Sbjct: 359 ISPDASRIVYVGPIGGDTLH------ERRLNERTFTSIPGTEAAQQPFFSPDGEWLAFFT 412

Query: 277 QKDEAMDIYSVDLQSNATERL-TNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSN 334
                  +  V ++    + L +N      S  S+S D  +IVF++   G   L ++  +
Sbjct: 413 A---NGFLKKVPVRGGRPQTLVSNLPGAGWSHGSWS-DRGEIVFDTFNAG---LRIIGPD 465

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G   + ++   +  ++ P   P    + FT  +GE   I  +  DGS +R L+  +N   
Sbjct: 466 GGTPRALTNPPKERHWTPEVLPGSRAVLFTASTGESLRIDAIAFDGSAQRTLL--ANASR 523

Query: 395 PTWSPSGRSLIFSRK 409
             +  SG  L+F R 
Sbjct: 524 ARYLASG-HLLFMRD 537



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 70/452 (15%), Positives = 134/452 (29%), Gaps = 94/452 (20%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGA----QVLVTGRVIKEGKDRL---RVEFRLWDV 133
            ++  +       P    +   W  +G            V   G D L   R+  R +  
Sbjct: 330 PVNPVTRLSIPLPPAVPLQLDWWPGMGLVISPDASRIVYVGPIGGDTLHERRLNERTFTS 389

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS- 192
               +   + FFS    W  +A   ++   + +    G   + +  +  +  S    +  
Sbjct: 390 IPGTEAAQQPFFSPDGEW--LAFFTANGFLKKVPVRGGRPQTLVSNLPGAGWSHGSWSDR 447

Query: 193 -----------LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
                      L ++  DG   R LT    +  + P   P  + V +      + LR+  
Sbjct: 448 GEIVFDTFNAGLRIIGPDGGTPRALTNPPKERHWTPEVLPGSRAVLFTA-STGESLRIDA 506

Query: 242 MDTRIDRAPKRIGN----------------FRSMILAP---------------------- 263
           +          + N                   +++AP                      
Sbjct: 507 IAFDGSAQRTLLANASRARYLASGHLLFMRDGGLMIAPFDASAVEVTGPVASVPVDVVVD 566

Query: 264 -----------RFSSNGKRALISVQKDE----AMDIYSVDLQSNATERLTNTLFINISAS 308
                        + NG   + ++  D+       +  VD      E  T TL  ++   
Sbjct: 567 LVNASAPIPQLAVARNGT-LVYALPADDDKPQESTLTWVDRAGKELE--TFTLPFDL-PF 622

Query: 309 Y--SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +  SPD   +V         +  +          + + K+     P+W P G  I F++ 
Sbjct: 623 FQLSPDGESLVVAGRAGSVVRTGIFDLKRKTLTGLFEFKDDFPSMPIWRPDGREIVFSRR 682

Query: 367 SGEKFAIGVMKKDG--SQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +  +  +     DG    +RL    ++   P  +SP GR+LI            L  +DL
Sbjct: 683 TAVEAELWSQPVDGHAQPQRLWKTPASYIGPGGFSPDGRTLILMATDLRTAEGHLRLLDL 742

Query: 424 NGRNETL----INTPAY------ASDPQWVGF 445
              N  +      TPA       + D +W+ +
Sbjct: 743 TAHNAPVERPWFPTPATEWTPNLSPDGRWLAY 774


>gi|145515818|ref|XP_001443803.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411203|emb|CAK76406.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2929

 Score = 96.2 bits (238), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 51/297 (17%), Positives = 103/297 (34%), Gaps = 39/297 (13%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              RLWD    +Q+                        +    +   +++   FV   + S
Sbjct: 2099 SIRLWDPISGQQV-----------------------NKLNGHDGWIWSATFSFVGHLLAS 2135

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G    ++ + D                +    F+P+ Q +A  ++D      + L D + 
Sbjct: 2136 GSDDLTIRIWDLKQCLEIRKLEGHSAPVHSVAFTPDSQLLASGSFDR----TIILWDIKS 2191

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             +  K++ +    I +  FS +G+    S   D  + I+ V       +RL        S
Sbjct: 2192 GKELKKLTDHDDGIWSVAFSIDGQFLA-SASNDTTIRIWDV-KSGKNIQRLEGHTKTVYS 2249

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +YSPD S +   SD    + + +  +    +  + +          +SP G  + F   
Sbjct: 2250 VAYSPDGSILGSASD---DQSIRLWDTKSGREMNMLEGHLGLITSVAFSPDG--LVFASG 2304

Query: 367  SGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             G+  +I +      +E  RL      +Q+  + P G+ +        DT  +L+ +
Sbjct: 2305 GGQDQSIRIWDLKSGKELCRLDGHSGWVQSIAFCPKGQLIA---SGSSDTSVRLWDV 2358



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/366 (13%), Positives = 115/366 (31%), Gaps = 75/366 (20%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ +    +   V  R+WD K  K+I+           R IA++    I           
Sbjct: 2004 GQTLASASNDYTV--RVWDTKSGKEILKLS--GHTGWVRSIAYSPDGLII---------- 2049

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                        SG   N++ + D     +          +   +FSP+ Q +A A+ D 
Sbjct: 2050 -----------ASGSSDNTVRLWDVSFGYLILKLEGHTDQVRSVQFSPDGQMIASASNDK 2098

Query: 234  --------------------------------------EDILRVYLMDTRIDRAPKRIGN 255
                                                   D L + + D +     +++  
Sbjct: 2099 SIRLWDPISGQQVNKLNGHDGWIWSATFSFVGHLLASGSDDLTIRIWDLKQCLEIRKLEG 2158

Query: 256  FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
              + + +  F+ +  + L S   D  + ++ +       ++LT+      S ++S D   
Sbjct: 2159 HSAPVHSVAFTPD-SQLLASGSFDRTIILWDI-KSGKELKKLTDHDDGIWSVAFSIDGQF 2216

Query: 316  IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            +   S+      + +         +  +    + +   +SP G ++     + +  +I +
Sbjct: 2217 LASASN---DTTIRIWDVKSGKNIQRLEGHTKTVYSVAYSPDGSIL---GSASDDQSIRL 2270

Query: 376  MKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                  +E  ++E     + +  +SP G  L+F+     D   +++ +        L   
Sbjct: 2271 WDTKSGREMNMLEGHLGLITSVAFSPDG--LVFASGGGQDQSIRIWDLKSGKELCRLDGH 2328

Query: 434  PAYASD 439
              +   
Sbjct: 2329 SGWVQS 2334



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/302 (14%), Positives = 94/302 (31%), Gaps = 42/302 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G V   G  + +   R+WD+K  K++            R   H+               +
Sbjct: 2298 GLVFASGGGQDQ-SIRIWDLKSGKELC-----------RLDGHS--------------GW 2331

Query: 174  NSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
               I F  +   + SG    S+ + D +              +    FSP +  +A  + 
Sbjct: 2332 VQSIAFCPKGQLIASGSSDTSVRLWDVESGKEISKLEGHLNWVCSVAFSPKEDLLASGSE 2391

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D      + L   +  +   ++      + +  FS +G R   S   D  + I+   L  
Sbjct: 2392 DQ----SIILWHIKTGKLITKLLGHSDSVQSVAFSCDGSRLA-SASGDYLVKIWDTKL-G 2445

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                 L+          +SP+   +       G   + +  +         +    +   
Sbjct: 2446 QEILELSEHNDSLQCVIFSPNGQILA---SAGGDYIIQLWDAVSGQDIMKLEGHTDAVQS 2502

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRK 409
              + P G ++A         +I +       E   ++       +  +SP+G +L+ + +
Sbjct: 2503 IAFYPDGKVLA---SGSSDHSIRIWDITTGTEMQKIDGHTGCVYSIAFSPNGEALVSASE 2559

Query: 410  KD 411
             +
Sbjct: 2560 DN 2561



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 86/272 (31%), Gaps = 54/272 (19%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            +N           +    FSP+ Q +A A+ D      V + DT+  +   ++      +
Sbjct: 1982 SNELPTLKGHSDSVSSVAFSPDGQTLASASND----YTVRVWDTKSGKEILKLSGHTGWV 2037

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFE 319
             +  +S +G     S   D  + ++  D+       +L        S  +SPD   I   
Sbjct: 2038 RSIAYSPDGLIIA-SGSSDNTVRLW--DVSFGYLILKLEGHTDQVRSVQFSPDGQMIASA 2094

Query: 320  SD----REGKE-----------------------------------QLYVMQSNGSDQKR 340
            S+    R                                        + +       + R
Sbjct: 2095 SNDKSIRLWDPISGQQVNKLNGHDGWIWSATFSFVGHLLASGSDDLTIRIWDLKQCLEIR 2154

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSP 399
              +   A      ++P   L+A   F      +  +K  G + + L + D  + +  +S 
Sbjct: 2155 KLEGHSAPVHSVAFTPDSQLLASGSFD-RTIILWDIK-SGKELKKLTDHDDGIWSVAFSI 2212

Query: 400  SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             G+ L  +     DT  +++ +  +G+N   +
Sbjct: 2213 DGQFLASASN---DTTIRIWDVK-SGKNIQRL 2240



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 100/313 (31%), Gaps = 48/313 (15%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G  +        V  ++WD K  ++I+                            E  D 
Sbjct: 2425 GSRLASASGDYLV--KIWDTKLGQEILELS-------------------------EHNDS 2457

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
               ++F     +         +   D   G +I  L       +    F P+ + +A  +
Sbjct: 2458 LQCVIFSPNGQILASAGGDYIIQLWDAVSGQDIMKL-EGHTDAVQSIAFYPDGKVLASGS 2516

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             D      + + D       ++I      + +  FS NG  AL+S  +D ++ ++  + +
Sbjct: 2517 SDH----SIRIWDITTGTEMQKIDGHTGCVYSIAFSPNG-EALVSASEDNSILLW--NTK 2569

Query: 291  S-NATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            S    +++        S + SPD   +     D      + +       +++        
Sbjct: 2570 SIKEMQQINGDTMWIYSVAQSPDQQSLALACID----YSIRLWDLKSEKERQKLIGHSDQ 2625

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                 +S  G  +A +    +K  +  +K     + L+   + + +  +S  G  L    
Sbjct: 2626 VEVIAFSADGQTMA-SAGRDKKIRLWNLKSQIDVQILIAHSATIWSLRFSNDGLRLA--- 2681

Query: 409  KKDGDTGSKLYSI 421
                DT  +++ +
Sbjct: 2682 SGSSDTTIRIWVV 2694



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 7/138 (5%)

Query: 283  DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +   +++ SN    L        S ++SPD   +   S+      + V  +    +    
Sbjct: 1974 NCRWININSNELPTLKGHSDSVSSVAFSPDGQTLASASN---DYTVRVWDTKSGKEILKL 2030

Query: 343  QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                       +SP G LI  +  S     +  +       +L      +++  +SP G+
Sbjct: 2031 SGHTGWVRSIAYSPDG-LIIASGSSDNTVRLWDVSFGYLILKLEGHTDQVRSVQFSPDGQ 2089

Query: 403  SLIFSRKKDGDTGSKLYS 420
             +  +     D   +L+ 
Sbjct: 2090 MIASASN---DKSIRLWD 2104


>gi|320162538|ref|YP_004175763.1| hypothetical protein ANT_31370 [Anaerolinea thermophila UNI-1]
 gi|319996392|dbj|BAJ65163.1| hypothetical protein ANT_31370 [Anaerolinea thermophila UNI-1]
          Length = 227

 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 52/126 (41%), Gaps = 6/126 (4%)

Query: 222 NQQKVAYATYDDEDILR----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-V 276
           N  K+ + +YD  D       +YLMD+      +           P +S    R      
Sbjct: 97  NSGKIVF-SYDPRDAPSVGYGIYLMDSDGSHRLRLSAEDALTDSQPAWSPEHCRIAFVRF 155

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             + + DI+ +     +  ++T     +    +SPD  QI F SDR+G   L+VM  NG 
Sbjct: 156 NHEGSDDIFLMSADGGSVLQITRHPARDTFPDWSPDGMQISFISDRDGSRNLFVMDVNGE 215

Query: 337 DQKRIS 342
             ++++
Sbjct: 216 HVRQLT 221



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 8/127 (6%)

Query: 312 DSSQIVFESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +S +IVF  D          +Y+M S+GS + R+S +   +   P WSP+   IAF +F+
Sbjct: 97  NSGKIVFSYDPRDAPSVGYGIYLMDSDGSHRLRLSAEDALTDSQPAWSPEHCRIAFVRFN 156

Query: 368 G-EKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                 I +M  DG    ++    +    P WSP G  + F   +DG     L+ +D+NG
Sbjct: 157 HEGSDDIFLMSADGGSVLQITRHPARDTFPDWSPDGMQISFISDRDGSR--NLFVMDVNG 214

Query: 426 RNETLIN 432
            +   + 
Sbjct: 215 EHVRQLT 221



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 56/129 (43%), Gaps = 1/129 (0%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +I+F  +   +  +   + +MD DG++   L+        +P +SP   ++A+  ++ 
Sbjct: 98  SGKIVFSYDPRDAPSVGYGIYLMDSDGSHRLRLSAEDALTDSQPAWSPEHCRIAFVRFNH 157

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           E    ++LM        + I    +    P +S +G +      +D + +++ +D+    
Sbjct: 158 EGSDDIFLMSADGGSVLQ-ITRHPARDTFPDWSPDGMQISFISDRDGSRNLFVMDVNGEH 216

Query: 294 TERLTNTLF 302
             +LT+   
Sbjct: 217 VRQLTDAQS 225



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 7/124 (5%)

Query: 271 RALISVQKDEAMD----IYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFES-DREG 324
           + + S    +A      IY +D   +   RL+    + +   ++SP+  +I F   + EG
Sbjct: 100 KIVFSYDPRDAPSVGYGIYLMDSDGSHRLRLSAEDALTDSQPAWSPEHCRIAFVRFNHEG 159

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + +++M ++G    +I++   A    P WSP G  I+F         + VM  +G   R
Sbjct: 160 SDDIFLMSADGGSVLQITR-HPARDTFPDWSPDGMQISFISDRDGSRNLFVMDVNGEHVR 218

Query: 385 LLVE 388
            L +
Sbjct: 219 QLTD 222


>gi|332706874|ref|ZP_08426935.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332354758|gb|EGJ34237.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1617

 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 60/321 (18%), Positives = 109/321 (33%), Gaps = 46/321 (14%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWD +  + I   +            HT  +DI        G            ++SG 
Sbjct: 1001 RLWDTETGQLIHTLE-----------GHT--NDINAIAFSPDG----------NKILSGG 1037

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              NSL + D +   + +        +    FSP+  K+        D   + L DT   +
Sbjct: 1038 DDNSLRLWDTESGQLIHTLQGHANHVTSIAFSPDGNKI----LSGGDDNSLRLWDTESGQ 1093

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
                +      +    FS +G +   S   D  + ++  D QS            N+ A 
Sbjct: 1094 LIHTLQGHTDFVNDIAFSPDGNKI-FSGSDDNTLRLW--DTQSGQLLYTYEGHTRNVLAI 1150

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            ++S D ++I+  S     + L +  +      R  Q  ++      +SP G+ I  ++  
Sbjct: 1151 AFSRDGNKILSGS---WDDTLRLWDTQSGQLIRTLQGHKSYVNGIAFSPDGNKIL-SRGD 1206

Query: 368  GEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 +     D    +LL       S +    +SP G+ ++ S     D   +L+  D 
Sbjct: 1207 DNTVRLW----DTGSGQLLYALEGHKSYVNDIAFSPDGKRILSSSH---DHSLRLWDTDS 1259

Query: 424  NGRNETLINTPAYASDPQWVG 444
                 TL    +Y +D  +  
Sbjct: 1260 GQLIRTLQGHKSYVNDIAFSP 1280



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 50/295 (16%), Positives = 105/295 (35%), Gaps = 42/295 (14%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             RLWD +  + I   +            H     +        G            ++S 
Sbjct: 1168 LRLWDTQSGQLIRTLQ-----------GHK--SYVNGIAFSPDG----------NKILSR 1204

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               N++ + D     + Y        + +  FSP+ +++  +++D      + L DT   
Sbjct: 1205 GDDNTVRLWDTGSGQLLYALEGHKSYVNDIAFSPDGKRILSSSHDH----SLRLWDTDSG 1260

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINIS 306
            +  + +   +S +    FS +G + L S   D+ + ++  D QS      L         
Sbjct: 1261 QLIRTLQGHKSYVNDIAFSPDGNKIL-SGSADKTLRLW--DTQSGQLLHNLEGHESFVHD 1317

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             ++SPD ++I+  S     + L +  +      R  Q K+++ +D  +SP G+ I     
Sbjct: 1318 IAFSPDGNKILSAS---WDKTLRLWDTQSGQLIRTLQGKKSNVYDIAFSPDGNKILSGNL 1374

Query: 367  SGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                  + +      Q    ++   S +    +SP G  ++       D   +L+
Sbjct: 1375 DNT---VRLWDTQSGQLLYTLKGHKSYVTEIAFSPDGNKILSGSD---DNTLRLW 1423



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 54/297 (18%), Positives = 102/297 (34%), Gaps = 45/297 (15%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ I  G D   V  RLWD +  + I   +            HT  +DI        G  
Sbjct: 904  GKQILSGSDDRTV--RLWDTETGQLIHTLE-----------GHT--NDINAIAFSRDG-- 946

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    + ++SG    ++ + D +   + +       ++ +  FSP+ +++   + D 
Sbjct: 947  --------KQILSGSFDKTVRLWDTETGQLIHTLEGHTYLVTDIAFSPDGKQILSGSRDK 998

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L DT   +    +    + I A  FS +G +    +   +   +   D +S  
Sbjct: 999  ----TVRLWDTETGQLIHTLEGHTNDINAIAFSPDGNKI---LSGGDDNSLRLWDTESGQ 1051

Query: 294  TERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                      +  S ++SPD ++I+   D      L +  +         Q       D 
Sbjct: 1052 LIHTLQGHANHVTSIAFSPDGNKILSGGD---DNSLRLWDTESGQLIHTLQGHTDFVNDI 1108

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLI 405
             +SP G+ I F+        +     D    +LL        N+ A  +S  G  ++
Sbjct: 1109 AFSPDGNKI-FSGSDDNTLRLW----DTQSGQLLYTYEGHTRNVLAIAFSRDGNKIL 1160



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 99/324 (30%), Gaps = 51/324 (15%)

Query: 121  KDRLRVEFRLWDVKDRKQII---GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
                    RLWD +  + I    G  +  +      IA   S D                
Sbjct: 951  SGSFDKTVRLWDTETGQLIHTLEGHTYLVT-----DIA--FSPD---------------- 987

Query: 178  LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
                + ++SG    ++ + D +   + +        +    FSP+  K+        D  
Sbjct: 988  ---GKQILSGSRDKTVRLWDTETGQLIHTLEGHTNDINAIAFSPDGNKI----LSGGDDN 1040

Query: 238  RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER- 296
             + L DT   +    +    + + +  FS +G +    +   +   +   D +S      
Sbjct: 1041 SLRLWDTESGQLIHTLQGHANHVTSIAFSPDGNKI---LSGGDDNSLRLWDTESGQLIHT 1097

Query: 297  LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            L          ++SPD ++I   SD      L +  +         +    +     +S 
Sbjct: 1098 LQGHTDFVNDIAFSPDGNKIFSGSD---DNTLRLWDTQSGQLLYTYEGHTRNVLAIAFSR 1154

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
             G+ I    +      + +      Q    ++   S +    +SP G  ++    +  D 
Sbjct: 1155 DGNKILSGSWDDT---LRLWDTQSGQLIRTLQGHKSYVNGIAFSPDGNKIL---SRGDDN 1208

Query: 415  GSKLYSIDLNGRNETLINTPAYAS 438
              +L+     G  + L     + S
Sbjct: 1209 TVRLWD---TGSGQLLYALEGHKS 1229



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 54/313 (17%), Positives = 107/313 (34%), Gaps = 38/313 (12%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIG----KKFFS----SPASWR----------KIAH 156
            +++  G D      RLWD    + +      K + +    SP   R          ++  
Sbjct: 1200 KILSRGDDN---TVRLWDTGSGQLLYALEGHKSYVNDIAFSPDGKRILSSSHDHSLRLWD 1256

Query: 157  TISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
            T S  + +++ G K   N        + ++SG    +L + D     + +     +  + 
Sbjct: 1257 TDSGQLIRTLQGHKSYVNDIAFSPDGNKILSGSADKTLRLWDTQSGQLLHNLEGHESFVH 1316

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            +  FSP+  K+  A++D      + L DT+  +  + +   +S +    FS +G + L S
Sbjct: 1317 DIAFSPDGNKILSASWDK----TLRLWDTQSGQLIRTLQGKKSNVYDIAFSPDGNKIL-S 1371

Query: 276  VQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               D  + ++  D QS      L          ++SPD ++I+  SD      L +  + 
Sbjct: 1372 GNLDNTVRLW--DTQSGQLLYTLKGHKSYVTEIAFSPDGNKILSGSD---DNTLRLWNTQ 1426

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--L 392
                    +   A      +S  G  I           + +      Q     E     +
Sbjct: 1427 SGQLLYTLKGHTARVNGIAFSQNGKQILSGSADKT---LRLWNTQSGQLLHTYEGHTAPV 1483

Query: 393  QAPTWSPSGRSLI 405
                 S  G  ++
Sbjct: 1484 NGIALSRDGNKIL 1496



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 92/249 (36%), Gaps = 21/249 (8%)

Query: 176  RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            +++++   V++ +  + L  +D+     R +       + +  FSP+ +++   + D + 
Sbjct: 817  KVIYLEPKVINEVHSSLLTALDK--VRERNILQGYTADVTDIAFSPDGKQILSGSDDGK- 873

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
               V L +T   +    +      +    FS +GK+ L S   D  + ++  D ++    
Sbjct: 874  ---VRLWNTETGQLIHTLEGHTDDVTDIAFSPDGKQIL-SGSDDRTVRLW--DTETGQLI 927

Query: 296  RLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                    +I+A ++S D  QI+  S     + + +  +         +       D  +
Sbjct: 928  HTLEGHTNDINAIAFSRDGKQILSGSF---DKTVRLWDTETGQLIHTLEGHTYLVTDIAF 984

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            SP G  I           + +   +  Q    L    +++ A  +SP G  ++       
Sbjct: 985  SPDGKQILSGSRDKT---VRLWDTETGQLIHTLEGHTNDINAIAFSPDGNKIL---SGGD 1038

Query: 413  DTGSKLYSI 421
            D   +L+  
Sbjct: 1039 DNSLRLWDT 1047


>gi|254410454|ref|ZP_05024233.1| hypothetical protein MC7420_2969 [Microcoleus chthonoplastes PCC
            7420]
 gi|196182660|gb|EDX77645.1| hypothetical protein MC7420_2969 [Microcoleus chthonoplastes PCC
            7420]
          Length = 1687

 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 65/373 (17%), Positives = 137/373 (36%), Gaps = 56/373 (15%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLG---------AQVLVTGRVIKEG--------KDRL 124
            IS     Q + +  +    + W + G            ++      +G         + +
Sbjct: 1253 ISFSPDGQYLVSASADKTVKLWRTDGRLLNTLSGHQDAVIAVTYSPDGQMIASGSDDNTI 1312

Query: 125  RV---EFRLWDVKDR--KQIIGKKFFSSPASWRKIAHTISDDIYQ-------SITGEKGD 172
            ++   +  L D      K I+G  F  +      +A   +D+  +        +    G 
Sbjct: 1313 KLWRPDGTLIDTLQGHGKAILGLGFSPNGK---ILASASADNTIKLWQVKGGMLQPIPGH 1369

Query: 173  FN--SRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                S + F +  + + +    N++ +  R G  ++ +   +D +     FS N + +A 
Sbjct: 1370 SQPISSVSFSANGQRIATASWDNTVKLWTRQGQLLKTIAAHQDSVNSV-SFSDNGETLAT 1428

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + D    ++++  D       K +   +  + +  FS +G+R + S   D+ + ++ +D
Sbjct: 1429 GSDD--KTIKLWNPDGTWQ---KTLSGHKDGVTSVNFSPDGQRLV-SSSADKTVKLWQID 1482

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  + L+         S+SPD S I   SD    + + +   NG   K + +    S
Sbjct: 1483 --GKLEKTLSGHQGTVWGVSFSPDGSFIASASD---DKTVKLWSRNGRLIKTL-RGHTDS 1536

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFS 407
                 +SP G+LIA     G    + +  ++G   R L   + ++   T+SP G  +   
Sbjct: 1537 VNWVTFSPDGELIASASNDGT---VNLWSREGKLVRPLKGHNGSVNWVTFSPDGNFIASG 1593

Query: 408  RKKDGDTGSKLYS 420
                 D    L+S
Sbjct: 1594 SD---DKTVNLWS 1603



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/298 (16%), Positives = 112/298 (37%), Gaps = 37/298 (12%)

Query: 134  KDRKQIIGKKFFSSPASWRK--------IAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
             + ++I    + ++   W +         AH   D +      + G          E++ 
Sbjct: 1380 ANGQRIATASWDNTVKLWTRQGQLLKTIAAHQ--DSVNSVSFSDNG----------ETLA 1427

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G    ++ + + DG   + L+  +D +     FSP+ Q++  ++ D    ++++ +D  
Sbjct: 1428 TGSDDKTIKLWNPDGTWQKTLSGHKDGVTSV-NFSPDGQRLVSSSAD--KTVKLWQID-- 1482

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +  K +   +  +    FS +G     S   D+ + ++S +      + L        
Sbjct: 1483 -GKLEKTLSGHQGTVWGVSFSPDGSFIA-SASDDKTVKLWSRN--GRLIKTLRGHTDSVN 1538

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              ++SPD   I   S+ +G   L+   S      R  +    S     +SP G+ IA + 
Sbjct: 1539 WVTFSPDGELIASASN-DGTVNLW---SREGKLVRPLKGHNGSVNWVTFSPDGNFIA-SG 1593

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               +   +   +        +     +   ++SP G  L  + +   DT   L+++DL
Sbjct: 1594 SDDKTVNLWSRQTGHLINSFVGHQDAVFGVSFSPDGNILASASQ---DTTVILWNLDL 1648



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 87/244 (35%), Gaps = 29/244 (11%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G   R      +  +    FSP+ + +A A+ D    ++++            +G     
Sbjct: 1071 GVKERNRLTRHNDWVSSVSFSPDGKLIASASRD--KTIQLWSQQGEWLNE---VGRHNQG 1125

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + A RFS  G   L S  +D  + ++S   +      LT       S S+SPD  ++V  
Sbjct: 1126 VYAVRFSPQG-EILASASEDNTIKLWS--REGRLLRTLTGHGDRVHSISFSPDGQRLVSA 1182

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            S+      + + + +     +          D  +S  G LIA          I + + D
Sbjct: 1183 SE---DNTIKLWRIDDGKLLKTLSGHNHWVLDVSFSANGQLIASASRDKT---IKLWQSD 1236

Query: 380  GSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            G+    L        P    ++SP G+ L+       D   KL+  D       L+NT +
Sbjct: 1237 GTLLETLTA---HNQPVLDISFSPDGQYLV---SASADKTVKLWRTDG-----RLLNTLS 1285

Query: 436  YASD 439
               D
Sbjct: 1286 GHQD 1289



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 91/240 (37%), Gaps = 19/240 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + +VS    N++ +   D   +       +  + +  FS N Q +A A+ D      + L
Sbjct: 1177 QRLVSASEDNTIKLWRIDDGKLLKTLSGHNHWVLDVSFSANGQLIASASRDK----TIKL 1232

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
              +      + +      +L   FS +G+  + S   D+ + ++  D        L+   
Sbjct: 1233 WQSD-GTLLETLTAHNQPVLDISFSPDGQYLV-SASADKTVKLWRTD--GRLLNTLSGHQ 1288

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               I+ +YSPD   I   SD      + + + +G+    +    +A      +SP G ++
Sbjct: 1289 DAVIAVTYSPDGQMIASGSD---DNTIKLWRPDGTLIDTLQGHGKAILGLG-FSPNGKIL 1344

Query: 362  AFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A          I + +  G   + +      + + ++S +G+ +  +     D   KL++
Sbjct: 1345 ASASADNT---IKLWQVKGGMLQPIPGHSQPISSVSFSANGQRIATASW---DNTVKLWT 1398



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 6/105 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ +  R+G  +R L    +  +    FSP+   +A  + D      V L   +
Sbjct: 1551 SASNDGTVNLWSREGKLVRPL-KGHNGSVNWVTFSPDGNFIASGSDDK----TVNLWSRQ 1605

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                       +  +    FS +G   L S  +D  + ++++DL 
Sbjct: 1606 TGHLINSFVGHQDAVFGVSFSPDGN-ILASASQDTTVILWNLDLA 1649


>gi|297183211|gb|ADI19351.1| dipeptidyl aminopeptidases/acylaminoacyl-peptidases [uncultured
           Chloroflexi bacterium HF0500_03M05]
          Length = 647

 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 86/240 (35%), Gaps = 49/240 (20%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISV-------QKDEAMDIYSVDLQSNATERLTNTLF 302
           P+ + +F+++  A + S +G      V        K    +I+ V        +LT    
Sbjct: 9   PEDVLSFKAVSDA-QLSPDGSIVAYVVADPYKIETKYPRSNIWVVPTDGGDATQLTFGPR 67

Query: 303 INISASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQ-----DKEASYFDPVWS 355
            ++   +SPD   +VF SDR  +G+ QLY++   G +  +++          S     WS
Sbjct: 68  SDLCPRWSPDGQSLVFLSDRTEDGQRQLYLLPMYGGEAAQLTTVEGSIPASRSVDTVAWS 127

Query: 356 PQGDLIAFTK----------------------FSGEKFAIGVMKKDGSQERLLV----ED 389
           P G  IAF K                       + +   I V+  D    ++L     +D
Sbjct: 128 PDGRKIAFMKTDAETEQEKLRQMEKDDAIEFERNPKYTRINVVDVDT---QILSWVSPDD 184

Query: 390 SNLQAPTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWVG 444
             +    WSPSG            +      +L +  ++G     I+ +    + P W  
Sbjct: 185 LQVWEFCWSPSGEEFAVVVSDLPFEQHWYTCRLATFSIDGGQIQNIHFSKRQIAKPTWSP 244



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 105/313 (33%), Gaps = 47/313 (15%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G   + ++     + +   ++++ V+  DG +   LT      L  PR+SP+ Q + 
Sbjct: 24  SPDGSIVAYVVADPYKIETKYPRSNIWVVPTDGGDATQLTFGPRSDLC-PRWSPDGQSLV 82

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------FSSNGKRALI------- 274
           + +   ED  R   +         ++      I A R      +S +G++          
Sbjct: 83  FLSDRTEDGQRQLYLLPMYGGEAAQLTTVEGSIPASRSVDTVAWSPDGRKIAFMKTDAET 142

Query: 275 ------SVQKDEAMD---------IYSVDLQSNATERLTNTLFINISASYSPDSSQIV-F 318
                  ++KD+A++         I  VD+ +     ++          +SP   +    
Sbjct: 143 EQEKLRQMEKDDAIEFERNPKYTRINVVDVDTQILSWVSPDDLQVWEFCWSPSGEEFAVV 202

Query: 319 ESD-----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------ 367
            SD          +L     +G   + I   K      P WSP    +AF   +      
Sbjct: 203 VSDLPFEQHWYTCRLATFSIDGGQIQNIHFSKRQ-IAKPTWSPDNGSVAFLSSNWSDRGI 261

Query: 368 GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                I V   D  + R L  +  +++ +  WS   + L+    + G TG     ++   
Sbjct: 262 TSGSVIVVPVPDCGKTRDLSGNQIASVNSVAWSDDSQHLLTVTHERGGTGLSKIEVN--- 318

Query: 426 RNETLINTPAYAS 438
             E ++      +
Sbjct: 319 TGERILLWHGDVT 331


>gi|186686820|ref|YP_001870013.1| WD-40 repeat-containing protein [Nostoc punctiforme PCC 73102]
 gi|186469172|gb|ACC84972.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 2172

 Score = 96.2 bits (238), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/246 (21%), Positives = 103/246 (41%), Gaps = 27/246 (10%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +++ +    FSP+ QK+   ++D         +     +    +   +  +L   FS
Sbjct: 1078 LKGQEKTVKSASFSPDGQKIVTVSFDAASSSGAVRLWDLSGKLLVELQGHQGQVLCANFS 1137

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +NG+R + +   D+   ++  DL       L++   +N  A +SPD  +IV  SD +G  
Sbjct: 1138 ANGQRIV-TASDDKTARVW--DLSGKQIAILSHQGGVNR-AIFSPDGQRIVTASD-DGTA 1192

Query: 327  QLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             L+    +G   K ++Q KE         +SP G L+    + G      V    G Q  
Sbjct: 1193 HLW--DLSG---KLLTQFKEHQDAIQSVSFSPNGQLVVTASWDGTA---RVWNLSGKQIV 1244

Query: 385  LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-------NETLINTPAYA 437
            L      +   ++SP+G+ ++ +     D  ++L+  DL+G         +  I +  ++
Sbjct: 1245 LFNHQREVIDTSFSPNGQYIVTASI---DNTARLW--DLSGTLLVEFVGYQGGIGSANFS 1299

Query: 438  SDPQWV 443
             D QW+
Sbjct: 1300 PDGQWI 1305



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 61/333 (18%), Positives = 117/333 (35%), Gaps = 52/333 (15%)

Query: 113 TGRVIKEGKDRLRVE-----FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
            G        +  V       ++WD+ +R+ +   +F    A  R +    S    + + 
Sbjct: 366 VGSARFSSDGQHIVTKSGNIAQVWDLSNRQLV---EFKGHQADIRSV--RFS-QNGELLV 419

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
               D  +RI  +     SG     L                 +  +++ RFSPN + + 
Sbjct: 420 TASDDKTARIWDL-----SGKQLAEL--------------KGHEDFIYDARFSPNGKSII 460

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            A+ D     R++ +  +     K     +  + +  FS +G++ LI   +  +  +   
Sbjct: 461 TASND--KTSRIWDLSGKQLAELK----HQDYVSSATFSPDGQKILI---ESGSFTLSIW 511

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D+       +    F   S ++SPD  +I+  S     +   V    G       +  + 
Sbjct: 512 DIYGKFLATIKGDKFDINSGTFSPDGQRILTTSL---DDTARVFDIYGKLLTEF-RGHQE 567

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIF 406
              +  +SP G  I      G    I V    G Q  LL     ++ + ++SP G+ ++ 
Sbjct: 568 QVINANYSPNGQRIVTASLDGT---IRVWDTSGKQLTLLKGHKGSVNSASFSPDGKVIV- 623

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
               D  T   +   D +G+    I TP   S+
Sbjct: 624 -SAYDDKT---ILVWDTSGKILAQIGTPKNESE 652



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 92/230 (40%), Gaps = 17/230 (7%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             D  N   +  S   I+ E RFSP+++ V  A+ D     RV+     +      +   +
Sbjct: 906  WDLNNKTAVRLSHQHIVNEARFSPDEKLVITASRD--GTARVW----DLSGKQIVLFKHQ 959

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            S + +  FS +GK+  I+   D+   ++  +L       L  +     SAS+SPD  +IV
Sbjct: 960  SSVNSANFSPDGKQI-ITASDDKTARVW--NLSGKLLLELKKSETTLNSASFSPDGKRIV 1016

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              SD +G  +L+   +       + + +     D  +SP G  I      G      +  
Sbjct: 1017 TTSD-DGTARLW---NTSGKLLMVLKGRPDWLLDASFSPDGKQIVTASDDGTA---RLWN 1069

Query: 378  KDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              G     L      +++ ++SP G+ ++        +   +   DL+G+
Sbjct: 1070 TSGKILAELKGQEKTVKSASFSPDGQKIVTVSFDAASSSGAVRLWDLSGK 1119



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 102/252 (40%), Gaps = 31/252 (12%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             D +       + +  +    FSPN +++  A+ D  +  RV+      + + K +   +
Sbjct: 785  WDTSGKELALLNHNSFVNSASFSPNGKQIVTASDD--NTARVW------NSSGKLLTELK 836

Query: 258  SM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                 +L+  FS + K  + +   D+   ++  DL       L     I  SA++S D  
Sbjct: 837  GHTQPVLSTSFSLDAKHIV-TASADKTARVW--DLSGKQLAEL-QHSAIVSSANFSSDGK 892

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            QI+  S  +G   ++    N     R+S   +    +  +SP   L+      G      
Sbjct: 893  QIITTSH-DGSAGVW--DLNNKTAVRLSH--QHIVNEARFSPDEKLVITASRDGTA---R 944

Query: 375  VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-----GRNET 429
            V    G Q  L    S++ +  +SP G+ +I +     D  ++++++         ++ET
Sbjct: 945  VWDLSGKQIVLFKHQSSVNSANFSPDGKQIITASD---DKTARVWNLSGKLLLELKKSET 1001

Query: 430  LINTPAYASDPQ 441
             +N+ +++ D +
Sbjct: 1002 TLNSASFSPDGK 1013



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 103/275 (37%), Gaps = 24/275 (8%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS---RILFVSESVVSGIIKN 191
            D KQI+      +   W      +++   Q  T +   F+    +I+ VS    S     
Sbjct: 1052 DGKQIVTASDDGTARLWNTSGKILAELKGQEKTVKSASFSPDGQKIVTVSFDAASSSGAV 1111

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
             L   D  G  +  L   + Q+L    FS N Q++  A+ D     RV+ +     +   
Sbjct: 1112 RLW--DLSGKLLVELQGHQGQVLCA-NFSANGQRIVTASDD--KTARVWDL---SGKQIA 1163

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             + +   +  A  FS +G+R + +   D    ++  DL      +         S S+SP
Sbjct: 1164 ILSHQGGVNRA-IFSPDGQRIV-TASDDGTAHLW--DLSGKLLTQFKEHQDAIQSVSFSP 1219

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            +  Q+V  +  +G  +++    N S ++ +  + +    D  +SP G  I          
Sbjct: 1220 NG-QLVVTASWDGTARVW----NLSGKQIVLFNHQREVIDTSFSPNGQYIVTASIDNTA- 1273

Query: 372  AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
               +    G+     V     + +  +SP G+ +I
Sbjct: 1274 --RLWDLSGTLLVEFVGYQGGIGSANFSPDGQWII 1306



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 115/315 (36%), Gaps = 33/315 (10%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D K I+     ++   W      +++ I      +  +F+     +  +      +    
Sbjct: 87  DGKLIVTAGADNTARVWDFAGKQVAELIGHQGNVKSANFSPDGKLIVTASFDDTAR---- 142

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D  G  +          ++   FSP+ + +  A  D      V L D    +  +   
Sbjct: 143 IWDISGKQL-VELKGHQGNVYSANFSPDGKAITTAGADK----TVRLWDL-SGKQLREFK 196

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              + + + +FS +GK  + +   D+   ++  D        L        SA++S D  
Sbjct: 197 AHNASVYSAKFSPDGKHIV-TASADKTARVW--DTSGKLLAELKGHTNTVWSANFSCDDK 253

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +IV  SD    +   +   +G     + Q  + S +   +SP    I         FA  
Sbjct: 254 RIVTASD---DKTARIWDLSGKQLAVL-QGHQDSVYSANFSPDSKQIVTASID---FATL 306

Query: 375 VMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR------- 426
           + +  G+   +L      + +  +SP G+ ++ +     D+ ++++  DL+G+       
Sbjct: 307 LWESSGTLLGKLQQHTGGVNSANFSPDGKWIVTASS---DSTARVW--DLSGKMLTELTS 361

Query: 427 NETLINTPAYASDPQ 441
            +  + +  ++SD Q
Sbjct: 362 FQREVGSARFSSDGQ 376



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 97/265 (36%), Gaps = 25/265 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+    N+  V D  G  +  L       +    FSP+ + +  A++D  D  R++ +  
Sbjct: 92  VTAGADNTARVWDFAGKQVAELI-GHQGNVKSANFSPDGKLIVTASFD--DTARIWDI-- 146

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +    +   +  + +  FS +GK A+ +   D+ + ++  DL               
Sbjct: 147 -SGKQLVELKGHQGNVYSANFSPDGK-AITTAGADKTVRLW--DLSGKQLREFKAHNASV 202

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            SA +SPD   IV  S     +   V  ++G     + +    + +   +S     I   
Sbjct: 203 YSAKFSPDGKHIVTAS---ADKTARVWDTSGKLLAEL-KGHTNTVWSANFSCDDKRIVTA 258

Query: 365 KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                     +    G Q  +L     ++ +  +SP  + ++ +     D  + L+    
Sbjct: 259 SDDKTA---RIWDLSGKQLAVLQGHQDSVYSANFSPDSKQIVTASI---DFATLLWESSG 312

Query: 424 N--GRNETL---INTPAYASDPQWV 443
              G+ +     +N+  ++ D +W+
Sbjct: 313 TLLGKLQQHTGGVNSANFSPDGKWI 337



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 83/245 (33%), Gaps = 22/245 (8%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                  +    + I  +  S   +   P F  N   V +A             +     
Sbjct: 2   RDRRRWGIAHRTSRIILIALSAFLVTIAPTFPQNFSGVFFAPQVLAQTSNQQQTEAVTGS 61

Query: 249 AP------KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                   ++       + +  FS +GK  +++   D    ++  D        L     
Sbjct: 62  FIDYFAEERQFKGHEGSVNSASFSPDGK-LIVTAGADNTARVW--DFAGKQVAELIGHQG 118

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              SA++SPD   IV  S     +   +   +G     + +  + + +   +SP G  I 
Sbjct: 119 NVKSANFSPDGKLIVTASF---DDTARIWDISGKQLVEL-KGHQGNVYSANFSPDGKAI- 173

Query: 363 FTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +G    + +    G Q R     ++++ +  +SP G+ ++ +     D  ++++  
Sbjct: 174 --TTAGADKTVRLWDLSGKQLREFKAHNASVYSAKFSPDGKHIVTAS---ADKTARVW-- 226

Query: 422 DLNGR 426
           D +G+
Sbjct: 227 DTSGK 231



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 73/204 (35%), Gaps = 19/204 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +  A+ D     RV+ +     +    + +F+  + + RFSS+G+  +    
Sbjct: 329 NFSPDGKWIVTASSD--STARVWDL---SGKMLTELTSFQREVGSARFSSDGQHIV---T 380

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           K   +     DL +              S  +S +   +V  SD    +   +   +G  
Sbjct: 381 KSGNIAQVW-DLSNRQLVEFKGHQADIRSVRFSQNGELLVTASD---DKTARIWDLSGKQ 436

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              + +  E   +D  +SP G  I             +    G Q   L     + + T+
Sbjct: 437 LAEL-KGHEDFIYDARFSPNGKSIITASNDKTS---RIWDLSGKQLAELKHQDYVSSATF 492

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSI 421
           SP G+ ++      G     ++ I
Sbjct: 493 SPDGQKILIES---GSFTLSIWDI 513



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 50/317 (15%), Positives = 109/317 (34%), Gaps = 58/317 (18%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISD-----DIYQSITGEKGDFNSRILFVSE--- 182
           +D+             SP   R +  ++ D     DIY  +  E      +++  +    
Sbjct: 526 FDINSG--------TFSPDGQRILTTSLDDTARVFDIYGKLLTEFRGHQEQVINANYSPN 577

Query: 183 --SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
              +V+  +  ++ V D  G  +  L       +    FSP+ + +  A  D      + 
Sbjct: 578 GQRIVTASLDGTIRVWDTSGKQL-TLLKGHKGSVNSASFSPDGKVIVSAYDDK----TIL 632

Query: 241 LMDTRIDRAPKRIG-------NFRSMILAP---------RFSSNGKRALIS--------- 275
           + DT      +           F+    +P          FS +GKR +I          
Sbjct: 633 VWDTSGKILAQIGTPKNESEAGFQGKKFSPNDSEIIKLDSFSPDGKRIVIDNRVWSLSNK 692

Query: 276 -VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + +   +    +    ++   + +   +N S ++S D   I+  S    K  +Y+  S+
Sbjct: 693 LLVQIPKLKFPEIPTDESSLRLIFSVTKVN-STNFSHDGQMIITSS----KGIVYLWNSS 747

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G     + +          +S  G  I    + G      +    G +  LL  +S + +
Sbjct: 748 GKLLAEL-KKHWGPIRSASFSSNGQQIVTASYDGTA---RIWDTSGKELALLNHNSFVNS 803

Query: 395 PTWSPSGRSLIFSRKKD 411
            ++SP+G+ ++ +   +
Sbjct: 804 ASFSPNGKQIVTASDDN 820



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 59/331 (17%), Positives = 112/331 (33%), Gaps = 49/331 (14%)

Query: 134  KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
             + ++I+      +   W      I+   +Q                 + +V+     + 
Sbjct: 1138 ANGQRIVTASDDKTARVWDLSGKQIAILSHQGGVNRAIFSPDG-----QRIVTASDDGTA 1192

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             + D  G  +      +D I     FSPN Q V  A++D     RV+ +          +
Sbjct: 1193 HLWDLSGKLLTQFKEHQDAIQSV-SFSPNGQLVVTASWD--GTARVWNL----SGKQIVL 1245

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             N +  ++   FS NG+  + +   D    ++  DL                SA++SPD 
Sbjct: 1246 FNHQREVIDTSFSPNGQYIV-TASIDNTARLW--DLSGTLLVEFVGYQGGIGSANFSPDG 1302

Query: 314  SQIV-FESD-------------REGKEQLYVM-----QSNGSDQKRISQDKEASYFDPVW 354
              I+  E D             R  K  +Y        ++      + ++   +     +
Sbjct: 1303 QWIINLEYDKPSLWNLSLRFPLRFPKASIYAYEDTFPNTSVEKSTALLKEYWVNIGSAKF 1362

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKK 410
            SP G  I      G      V    G   RLL         + +  +SP G+ ++ +   
Sbjct: 1363 SPDGQRIISVFSDGST---RVWDLSG---RLLAFIKGHQGRVTSSNFSPDGQRILTTSN- 1415

Query: 411  DGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              D  ++++  DL+G+    +  PA  S P+
Sbjct: 1416 --DGTARIW--DLSGKQLASLELPALPSSPK 1442



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 61/195 (31%), Gaps = 22/195 (11%)

Query: 105  SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD--DI 162
            S   Q +VT  +            RLWD+     +    +     S    A+   D   I
Sbjct: 1258 SPNGQYIVTASIDNTA--------RLWDLSGTLLVEFVGYQGGIGS----ANFSPDGQWI 1305

Query: 163  YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
                  +   +N  + F      + I        +        L       +   +FSP+
Sbjct: 1306 INLEYDKPSLWNLSLRFPLRFPKASIYAYEDTFPNTSVEKSTALLKEYWVNIGSAKFSPD 1365

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             Q++     D     RV+ +  R+    K     +  + +  FS +G+R L +   D   
Sbjct: 1366 GQRIISVFSD--GSTRVWDLSGRLLAFIK---GHQGRVTSSNFSPDGQRIL-TTSNDGTA 1419

Query: 283  DIYSVDLQSNATERL 297
             I+  DL       L
Sbjct: 1420 RIW--DLSGKQLASL 1432


>gi|300867608|ref|ZP_07112257.1| putative WD-40 repeat protein [Oscillatoria sp. PCC 6506]
 gi|300334415|emb|CBN57427.1| putative WD-40 repeat protein [Oscillatoria sp. PCC 6506]
          Length = 1887

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 76/206 (36%), Gaps = 15/206 (7%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++          +    FSP+ Q +A  + D    ++++   +R  +  K +      +
Sbjct: 1645 FSLFLTLNGHKDSVMSVSFSPDGQLIASTSKD--KTVKLW---SRDGKLIKTLTGHTGWV 1699

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
             +  FS +GK    S   D  + ++S   +              +  S+SPD   +    
Sbjct: 1700 SSVSFSPDGKMLA-SASDDGTVKLWS--REGRILRSFYAHNNFVMGVSFSPDGKMLA--- 1753

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                   + +   +G+    + +    S     +SP G L+A   +      + +  ++G
Sbjct: 1754 TAGYDNTVKLWNLDGTMVATLLKGSSDSVTSVSFSPDGLLVASGSYDN---KVKIWSRNG 1810

Query: 381  SQERLLVEDSN-LQAPTWSPSGRSLI 405
            +  + L    N + + ++SP G+ L 
Sbjct: 1811 TLLKTLTGHRNSVMSVSFSPDGKILA 1836



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 88/243 (36%), Gaps = 43/243 (17%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                    +    FSP+ Q VA A+ D      + L  +R     + +    + + +  F
Sbjct: 1546 TLDGHQNRVQSVSFSPDGQIVASASVDK----TIKLW-SRSGILLQTLQGHSNRVSSLSF 1600

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATE------------------RLTNTLFIN--I 305
            S +GK  L+S   D+++ ++ V  Q                        LT     +  +
Sbjct: 1601 SPDGK-LLVSGSYDKSVKLWRVKSQGKIQNIVSSSLLSTLSPSPVFSLFLTLNGHKDSVM 1659

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S S+SPD   I   S     + + +   +G   K ++           +SP G ++A   
Sbjct: 1660 SVSFSPDGQLIASTSK---DKTVKLWSRDGKLIKTLT-GHTGWVSSVSFSPDGKMLASAS 1715

Query: 366  FSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              G       +K    + R+L      ++ +   ++SP G+ L  +     D   KL+++
Sbjct: 1716 DDG------TVKLWSREGRILRSFYAHNNFVMGVSFSPDGKMLATAGY---DNTVKLWNL 1766

Query: 422  DLN 424
            D  
Sbjct: 1767 DGT 1769



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 82/231 (35%), Gaps = 37/231 (16%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G   R        +++   FS + + +A  + D      V L  +         G+  ++
Sbjct: 1182 GVKERNRFEGHGDVIWGLSFSSDGKIIASGSVDK----TVKLWRSDGSLQATLKGHTDNI 1237

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                 FS N  + L S   D+ + I+  +   +  + L+         S+SPD   +   
Sbjct: 1238 TY-VAFSPN-SQILASGSLDKTVKIWRTN--GSLVKTLSGHTHNITGISFSPDGKMLASA 1293

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            S   G + + + + NGS  K +  D   +     +S  G +IA                D
Sbjct: 1294 S---GDKTVKIWRINGSLFKTLQHDSPVN--AVSFSRDGKIIASAS-------------D 1335

Query: 380  GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                ++           W   G+ L   R ++G   SK+YSI L+   E L
Sbjct: 1336 NGTVKI-----------WRNDGKLLANLRHREGVGLSKVYSISLSPNGEIL 1375



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +    N++ + + DG  +  L       +    FSP+   VA  +YD++  ++++   +R
Sbjct: 1754 TAGYDNTVKLWNLDGTMVATLLKGSSDSVTSVSFSPDGLLVASGSYDNK--VKIW---SR 1808

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                 K +   R+ +++  FS +GK  L S  KD  + ++
Sbjct: 1809 NGTLLKTLTGHRNSVMSVSFSPDGK-ILASGSKDNTVILW 1847



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 63/363 (17%), Positives = 122/363 (33%), Gaps = 83/363 (22%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            D K +       +   WR     I+  +++++  +            + + S     ++ 
Sbjct: 1286 DGKMLASASGDKTVKIWR-----INGSLFKTLQHDSPVNAVSFSRDGKIIASASDNGTVK 1340

Query: 195  VMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYAT-------YDDEDILRVYLMDT 244
            +   DG   AN+R+        ++    SPN + +A A        ++   IL+V     
Sbjct: 1341 IWRNDGKLLANLRHREGVGLSKVYSISLSPNGEILASAGEDKTVKLWNLTKILQVKEKKE 1400

Query: 245  RIDRAPKR-----IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD----------- 288
                  K      + N  S + +  FS +GK    S   D+ + I+S+            
Sbjct: 1401 ATALKTKDFLLATLTNHSSFVFSVSFSPDGKTLA-SGSADKTVKIWSLKKVVDPLANQAN 1459

Query: 289  --------------------LQSNATERLTNTLFIN------------------ISASYS 310
                                L SN  +R  N    N                     S+S
Sbjct: 1460 KPLPNPAISKGKMRDSVGRLLYSNDVKRKGNPNSENVKIEISLIRSLAGHGDKVTQVSWS 1519

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGE 369
            PDS+ +   S  +   +L+ +     D    + D   +    V +SP G ++A       
Sbjct: 1520 PDSNMLA-SSSFDKTVRLWRLD----DIPLKTLDGHQNRVQSVSFSPDGQIVASASVDKT 1574

Query: 370  KFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               I +  + G   + L   SN + + ++SP G+ L+       D   KL+ +   G+ +
Sbjct: 1575 ---IKLWSRSGILLQTLQGHSNRVSSLSFSPDGKLLVSGSY---DKSVKLWRVKSQGKIQ 1628

Query: 429  TLI 431
             ++
Sbjct: 1629 NIV 1631



 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 105/287 (36%), Gaps = 45/287 (15%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ +   +G+  + L    D  +    FS + + +A A+  D   ++++  D +
Sbjct: 1292 SASGDKTVKIWRINGSLFKTL--QHDSPVNAVSFSRDGKIIASAS--DNGTVKIWRNDGK 1347

Query: 246  IDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-------------LQS 291
            +    + R G   S + +   S NG   L S  +D+ + ++++              L++
Sbjct: 1348 LLANLRHREGVGLSKVYSISLSPNG-EILASAGEDKTVKLWNLTKILQVKEKKEATALKT 1406

Query: 292  NA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                   LTN      S S+SPD   +         ++   + S       ++       
Sbjct: 1407 KDFLLATLTNHSSFVFSVSFSPDGKTLA----SGSADKTVKIWSLKKVVDPLANQANKPL 1462

Query: 350  FDPVWSPQGD------LIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPS 400
             +P  S +G        + ++             +K + S  R L    + +   +WSP 
Sbjct: 1463 PNPAIS-KGKMRDSVGRLLYSNDVKRKGNPNSENVKIEISLIRSLAGHGDKVTQVSWSPD 1521

Query: 401  GRSLIFSRKKDGDTGSKLYSID------LNGRNETLINTPAYASDPQ 441
               L  S     D   +L+ +D      L+G ++  + + +++ D Q
Sbjct: 1522 SNMLASSS---FDKTVRLWRLDDIPLKTLDG-HQNRVQSVSFSPDGQ 1564


>gi|224539442|ref|ZP_03679981.1| hypothetical protein BACCELL_04347 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518947|gb|EEF88052.1| hypothetical protein BACCELL_04347 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 702

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 101/299 (33%), Gaps = 71/299 (23%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+++++AY        +++    V++M+T      K+I +         +   G + 
Sbjct: 59  AVSPDEKQIAYTVAYYSVPENKSNREVFVMNTDGTGN-KQITHTPWQENEVNWIKGGTKL 117

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
                +  +  ++ ++   +  ++LT         S+SPD  +++F +            
Sbjct: 118 AFLSNEGGSSQLWEMNPDGSGRKQLTQYDGDIEGYSFSPDGKKLLFIAQVKTKQSTADKY 177

Query: 322 ----------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDP------- 352
                                   G    +V   +G+    I    E   ++        
Sbjct: 178 PDLPKATGIIVTDLMYKHWDEWVTGAPHPFVADFDGNGISNIKDILEGEPYESPMRPWGG 237

Query: 353 ----VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWS 398
                WSP GD +A+T                I +      +   + E+       P +S
Sbjct: 238 IEQLAWSPAGDKVAYTCRKKTGLAYAISTNSDIYIYDLATKKTDNITEENKGYDTNPQYS 297

Query: 399 PSGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLI------NTPA--YASDPQWVGFM 446
           P G+ + + S ++DG     ++L+ ++L    +  +      N     +  DP+ + F+
Sbjct: 298 PDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKEFESNVDGFLWNRDPKSIYFI 356



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 109/307 (35%), Gaps = 63/307 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           +++ F+S    S    + L  M+ DG+  + LT     I     FSP+ +K+ +      
Sbjct: 115 TKLAFLSNEGGS----SQLWEMNPDGSGRKQLTQYDGDIEGY-SFSPDGKKLLFIAQVKT 169

Query: 232 ---------DDEDILRVYLMDTRIDRAPKRIG--------NFRSMILA------------ 262
                    D      + + D       + +         +F    ++            
Sbjct: 170 KQSTADKYPDLPKATGIIVTDLMYKHWDEWVTGAPHPFVADFDGNGISNIKDILEGEPYE 229

Query: 263 ----P-------RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLF 302
               P        +S  G +   + +K            DIY  DL +  T+ +T     
Sbjct: 230 SPMRPWGGIEQLAWSPAGDKVAYTCRKKTGLAYAISTNSDIYIYDLATKKTDNITEENKG 289

Query: 303 INISASYSPDSSQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + +  YSPD   I ++S +R+G      +L++M     +++ +S++ E++    +W+  
Sbjct: 290 YDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKEFESNVDGFLWNRD 349

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              I F      +  I  +    + +   + D      + + +G  +I + +     G +
Sbjct: 350 PKSIYFIGVWHGETQIYNINLAANDKVTQLTDGMYDYASLALAGDKVI-ALRHSMSMGDE 408

Query: 418 LYSIDLN 424
           +Y++   
Sbjct: 409 IYAVSAT 415



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 87/247 (35%), Gaps = 61/247 (24%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           S I     S + K+   +V      +     +++ ++      +++T+T +     ++  
Sbjct: 53  SRIGGVAVSPDEKQIAYTVAYYSVPENKSNREVFVMNTDGTGNKQITHTPWQENEVNWIK 112

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--- 368
             +++ F S+  G  QL+ M  +GS +K+++Q  +       +SP G  + F        
Sbjct: 113 GGTKLAFLSNEGGSSQLWEMNPDGSGRKQLTQY-DGDIEGYSFSPDGKKLLFIAQVKTKQ 171

Query: 369 ------------------------------EKFAIGVMKKDG---SQERLLVEDSNLQAP 395
                                               V   DG   S  + ++E    ++P
Sbjct: 172 STADKYPDLPKATGIIVTDLMYKHWDEWVTGAPHPFVADFDGNGISNIKDILEGEPYESP 231

Query: 396 ----------TWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLIN--TPAYA 437
                      WSP+G  + ++ RKK G      T S +Y  DL  +    I      Y 
Sbjct: 232 MRPWGGIEQLAWSPAGDKVAYTCRKKTGLAYAISTNSDIYIYDLATKKTDNITEENKGYD 291

Query: 438 SDPQWVG 444
           ++PQ+  
Sbjct: 292 TNPQYSP 298


>gi|295135562|ref|YP_003586238.1| tricorn protease [Zunongwangia profunda SM-A87]
 gi|294983577|gb|ADF54042.1| tricorn protease [Zunongwangia profunda SM-A87]
          Length = 1081

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 56/331 (16%), Positives = 121/331 (36%), Gaps = 40/331 (12%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +DV   K  +   F       R+     S++    ++ E G+FN   L +         K
Sbjct: 203 YDVDQDKHTMITSFKGED---RQPIFDDSEENLYYLSEESGNFNVHKLSIE------NPK 253

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +  +   +   +R+L+     +     F  + +        +   + V +    +D   
Sbjct: 254 ETEQLTSFESFPVRFLSFGNGTL----AFGYDGELYTMREGQEPKKVDVNIRTQPVDNND 309

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             I     +      S NGK      +     +++   +  + T+R+T+T       S++
Sbjct: 310 NYISIKDGVQEM-DVSPNGKEIAFVARG----EVFVTSVDGSLTKRITDTPNQERFVSFT 364

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ----------DKEASYFDPVWSPQGDL 360
           PD   +V+ S+R+GK  +Y  +    ++               + +   + P +SP G  
Sbjct: 365 PDGKSLVYSSERDGKWNIYKTEIVRKEEPFFYASTLLKEEPVIEADTDSYIPKYSPDGKK 424

Query: 361 IAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNL------QAPTWSPSGRSLIFSRKKDGD 413
           +A+      +  + V +    +E  LL  D         Q  TWSP  + ++        
Sbjct: 425 LAYIS---GRRNLRVKELSSGKEIDLLTSDDLFTMSDGDQYFTWSPDSKWIL-MDWGKLL 480

Query: 414 TGSKLYSIDLNG-RNETLINTPAYASDPQWV 443
           + +++  +  +G + E L  +     +P+WV
Sbjct: 481 SNNEVLLLAADGSKRENLTESGYQDYNPKWV 511



 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 73/210 (34%), Gaps = 36/210 (17%)

Query: 260 ILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            + P++      S +G+    + + +    +Y+V       +++T     +    +S D 
Sbjct: 21  QVTPKWIRYQTISPDGETIAFTYKGN----LYTVATSGGDAKQITFHKAHDYMPVWSKDG 76

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---- 369
            Q+ F SDR G   ++VM + G    R++           +S     + F     +    
Sbjct: 77  KQLAFASDRYGNFDVFVMDALGGPATRLTYHSN-DEQPFSFSADNKSVIFGAVRQDLATH 135

Query: 370 -------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT------- 414
                  +  +  +    G  +++    +  +    S  G+++++  K   +        
Sbjct: 136 RQFPASYQPELYRVPTTCGRVDQIFTIPA--EYVQISKDGKTMVYHDKVGSENEWRKHHV 193

Query: 415 ---GSKLYSIDLNGRNETLINT-PAYASDP 440
                 L++ D++    T+I +       P
Sbjct: 194 SSVTRDLWTYDVDQDKHTMITSFKGEDRQP 223



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 88/258 (34%), Gaps = 39/258 (15%)

Query: 209 SRDQILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +      P++      SP+ + +A+    +     +Y + T      K+I   ++    
Sbjct: 16  GQSFAQVTPKWIRYQTISPDGETIAFTYKGN-----LYTVAT-SGGDAKQITFHKAHDYM 69

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +S +GK+   +  +    D++ +D       RLT         S+S D+  ++F + R
Sbjct: 70  PVWSKDGKQLAFASDRYGNFDVFVMDALGGPATRLTYHSNDEQPFSFSADNKSVIFGAVR 129

Query: 323 -----------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
                        + +LY + +      +I     A Y     S  G  + +    G + 
Sbjct: 130 QDLATHRQFPASYQPELYRVPTTCGRVDQI-FTIPAEYVQ--ISKDGKTMVYHDKVGSEN 186

Query: 371 -----------FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                        +     D  +  ++       + P +  S  +L +  ++ G+     
Sbjct: 187 EWRKHHVSSVTRDLWTYDVDQDKHTMITSFKGEDRQPIFDDSEENLYYLSEESGNFNVHK 246

Query: 419 YSIDLNGRNETLINTPAY 436
            SI+     E L +  ++
Sbjct: 247 LSIENPKETEQLTSFESF 264



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 83/228 (36%), Gaps = 35/228 (15%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN +++A+    +        + +      KRI +  +      F+ +GK  + S ++D
Sbjct: 324 SPNGKEIAFVARGE------VFVTSVDGSLTKRITDTPNQERFVSFTPDGKSLVYSSERD 377

Query: 280 EAMDIYSVDLQSNAT------ERLTNTLFINIS-----ASYSPDSSQIVFESDREGKEQL 328
              +IY  ++             L     I          YSPD  ++ + S   G+  L
Sbjct: 378 GKWNIYKTEIVRKEEPFFYASTLLKEEPVIEADTDSYIPKYSPDGKKLAYIS---GRRNL 434

Query: 329 YVMQSN-GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSG-EKFAIGVMKKDGSQ 382
            V + + G +   ++ D   +  D      WSP    I            + ++  DGS+
Sbjct: 435 RVKELSSGKEIDLLTSDDLFTMSDGDQYFTWSPDSKWILMDWGKLLSNNEVLLLAADGSK 494

Query: 383 ERLLVEDS-NLQAPTWSPSGRSLIFSRKKD--------GDTGSKLYSI 421
              L E       P W   G+ +++   ++        G T + +YS+
Sbjct: 495 RENLTESGYQDYNPKWVNEGKQMLWFSNRNGLKSYATSGRTEADVYSM 542



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 78/197 (39%), Gaps = 23/197 (11%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  + V   DG+  + +T + +Q  F   F+P+ + + Y++  D     +Y  +      
Sbjct: 335 RGEVFVTSVDGSLTKRITDTPNQERFV-SFTPDGKSLVYSSERDGK-WNIYKTEIVRKEE 392

Query: 250 P----------KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLT 298
           P          + +    +    P++S +GK+           ++   +L S      LT
Sbjct: 393 PFFYASTLLKEEPVIEADTDSYIPKYSPDGKKLAYIS---GRRNLRVKELSSGKEIDLLT 449

Query: 299 NT-----LFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           +         +   ++SPDS  I+ +  +     ++ ++ ++GS ++ +++     Y +P
Sbjct: 450 SDDLFTMSDGDQYFTWSPDSKWILMDWGKLLSNNEVLLLAADGSKRENLTESGYQDY-NP 508

Query: 353 VWSPQGDLIAFTKFSGE 369
            W  +G  + +      
Sbjct: 509 KWVNEGKQMLWFSNRNG 525


>gi|262381309|ref|ZP_06074447.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262296486|gb|EEY84416.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 703

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/308 (17%), Positives = 107/308 (34%), Gaps = 63/308 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           ++I F+     S    + L  M+ DG + + L+     I     FSP+++KV + +    
Sbjct: 119 TKIAFLCNESGS----SQLWEMNPDGTDRKRLSDYDKDIEGF-AFSPDEKKVLFISQVKT 173

Query: 232 ---------DDEDILRVYLMDTRIDRAPKRIGNFR------------------------- 257
                    D +    V + D       + +                             
Sbjct: 174 VNSTADKYPDLDKATGVIITDLMYKHWDEWVTTVPHPFVADFDGKSISNPVDVMEGELFE 233

Query: 258 ------SMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLF 302
                   I    +++   +   + +K            DIY  DL +  T  +T     
Sbjct: 234 SPMKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKG 293

Query: 303 INISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + + +YSPD   I + S +R+G    + +L VM     ++  +S+D +++     WS  
Sbjct: 294 YDTNPTYSPDGKSIAWLSMERDGYEADQNRLMVMNLETGEKTFVSKDFDSNVDSYCWSAD 353

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              I FT     +  +  +      +   + +      + +  G  LI +++     G +
Sbjct: 354 CKRIYFTGVWHGESQVYQIDLANGNKITPLTEGMYDYASVALLGDKLI-AQRHSMSMGDE 412

Query: 418 LYSIDLNG 425
           +YSIDL G
Sbjct: 413 IYSIDLTG 420



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 54/315 (17%), Positives = 107/315 (33%), Gaps = 67/315 (21%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG++ + +T +      E  +     K+A+   +        +
Sbjct: 78  YSVPENKSNREVFVMNADGSDNKQITKTG-FAENEAVWIKGGTKIAFLCNESGSSQLWEM 136

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------KDEAMDI---------- 284
                DR  KR+ ++   I    FS + K+ L   Q        D+  D+          
Sbjct: 137 NPDGTDR--KRLSDYDKDIEGFAFSPDEKKVLFISQVKTVNSTADKYPDLDKATGVIITD 194

Query: 285 ----------------YSVDLQSNATER--------LTNTL-----FINISASYSPDSSQ 315
                           +  D    +           L  +       I    +++  S +
Sbjct: 195 LMYKHWDEWVTTVPHPFVADFDGKSISNPVDVMEGELFESPMKPFGGIE-QLAWNTTSDK 253

Query: 316 IVFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           I + S +             +YV   N      I+++ +    +P +SP G  IA+    
Sbjct: 254 IAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKGYDTNPTYSPDGKSIAWLSME 313

Query: 368 GEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            + +      + VM  +  ++  + +  DSN+ +  WS   + + F+    G+  S++Y 
Sbjct: 314 RDGYEADQNRLMVMNLETGEKTFVSKDFDSNVDSYCWSADCKRIYFTGVWHGE--SQVYQ 371

Query: 421 IDLNGRNETLINTPA 435
           IDL   N+    T  
Sbjct: 372 IDLANGNKITPLTEG 386



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 87/247 (35%), Gaps = 61/247 (24%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S +GK+ + +V      +     +++ ++   +  +++T T F    A +  
Sbjct: 57  GRIGGMNVSPDGKKVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTGFAENEAVWIK 116

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
             ++I F  +  G  QL+ M  +G+D+KR+S D +       +SP    + F        
Sbjct: 117 GGTKIAFLCNESGSSQLWEMNPDGTDRKRLS-DYDKDIEGFAFSPDEKKVLFISQVKTVN 175

Query: 367 -SGEKF---------------------------AIGVMKKDG---SQERLLVEDSNLQAP 395
            + +K+                              V   DG   S    ++E    ++P
Sbjct: 176 STADKYPDLDKATGVIITDLMYKHWDEWVTTVPHPFVADFDGKSISNPVDVMEGELFESP 235

Query: 396 ----------TWSPSGRSLIFSRKKDGD------TGSKLYSIDLNGRNETLIN--TPAYA 437
                      W+ +   + ++ +K         T S +Y  DLN +  T I      Y 
Sbjct: 236 MKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKGYD 295

Query: 438 SDPQWVG 444
           ++P +  
Sbjct: 296 TNPTYSP 302



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 88/274 (32%), Gaps = 61/274 (22%)

Query: 220 SPNQQKV----AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ +KV    AY +  +    R   +        K+I           +   G +    
Sbjct: 65  SPDGKKVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTGFAENEAVWIKGGTKIAFL 124

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------------- 321
             +  +  ++ ++      +RL++        ++SPD  +++F S               
Sbjct: 125 CNESGSSQLWEMNPDGTDRKRLSDYDKDIEGFAFSPDEKKVLFISQVKTVNSTADKYPDL 184

Query: 322 -------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDP---------- 352
                                     +V   +G          E   F+           
Sbjct: 185 DKATGVIITDLMYKHWDEWVTTVPHPFVADFDGKSISNPVDVMEGELFESPMKPFGGIEQ 244

Query: 353 -VWSPQGDLIAFTKF--SGEKF------AIGVMKKDGSQERLLVED--SNLQAPTWSPSG 401
             W+   D IA+T    +G+++       I V   +  Q   + E+       PT+SP G
Sbjct: 245 LAWNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKGYDTNPTYSPDG 304

Query: 402 RSLIFSR-KKDGDTGSK--LYSIDLNGRNETLIN 432
           +S+ +   ++DG    +  L  ++L    +T ++
Sbjct: 305 KSIAWLSMERDGYEADQNRLMVMNLETGEKTFVS 338



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 69/219 (31%), Gaps = 26/219 (11%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEP-----------RFSPNQQKVAYAT-------YDDED 235
            V D DG +I       +  LFE             ++    K+AY +       Y    
Sbjct: 211 FVADFDGKSISNPVDVMEGELFESPMKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYAIST 270

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEA----MDIYSVDLQ 290
              +Y+ D    +        +     P +S +GK     S+++D        +  ++L+
Sbjct: 271 NSDIYVYDLNTKQTTNITEENKGYDTNPTYSPDGKSIAWLSMERDGYEADQNRLMVMNLE 330

Query: 291 SNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +     ++     N+ +  +S D  +I F     G+ Q+Y +     ++     +    Y
Sbjct: 331 TGEKTFVSKDFDSNVDSYCWSADCKRIYFTGVWHGESQVYQIDLANGNKITPLTEGMYDY 390

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLV 387
                     LIA          I  +   G      L 
Sbjct: 391 ASVALLGD-KLIAQRHSMSMGDEIYSIDLTGDHTVTQLT 428


>gi|163788202|ref|ZP_02182648.1| putative Tricorn-like protease [Flavobacteriales bacterium ALC-1]
 gi|159876522|gb|EDP70580.1| putative Tricorn-like protease [Flavobacteriales bacterium ALC-1]
          Length = 1076

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S NG++   +   D    IY V +      RLT     +    +S D S+I F S+R 
Sbjct: 33  AISPNGQQIAFTYNAD----IYLVSVNGGKATRLTTHSDYDTKPVWSHDGSKIAFSSNRH 88

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           G   ++V+ SNG + KR++    A  +   +S + D I F    
Sbjct: 89  GNFDVFVIASNGGNIKRLTF-HSADDWATDFSQKDDEIWFNSIR 131



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 55/305 (18%), Positives = 108/305 (35%), Gaps = 38/305 (12%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S+D +  ++   G  N                 ++ + D     +R+L+ S   +L    
Sbjct: 225 SNDTFYYLSEMSGTIN------VYQSSLSNPNETIQISDFKMHPVRHLSTSNTGVLC--- 275

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQ 277
           +S N Q   Y     E    + +  +      +  +      +   + S NGK  +   +
Sbjct: 276 YSFNGQ--IYTQIPGEKPKLITVDVSGDTSLLQNELLFVNGGVREMKPSPNGKELIFIYR 333

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D    +++  +  + T RLTNT     S   S D   IV+  +R     LY    +  D
Sbjct: 334 GD----VFATSVDGSLTRRLTNTPEQERSIDISADGRTIVYAGERNNSWNLYTQTLSNKD 389

Query: 338 QKRISQ----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +K  +           + +A  F P +SP GD +A+ +   ++  +  +     +   + 
Sbjct: 390 EKYFTNALELKEAILLENKAETFQPKFSPSGDDVAYLE---DRTKLKTINLKSKKITSIH 446

Query: 388 EDSNLQAPT-------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD- 439
                 +         WSP G+    +   D     ++  +  NG  + +  + +  SD 
Sbjct: 447 NGEKHFSYADGDQDFEWSPDGKWFAITFYPDRYWVGEIGIVSANGDQKLINVSKSGFSDF 506

Query: 440 -PQWV 443
            PQW 
Sbjct: 507 YPQWS 511



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 77/213 (36%), Gaps = 29/213 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN +++ +    D          +      +R+ N      +   S++G+  + + +++
Sbjct: 322 SPNGKELIFIYRGD------VFATSVDGSLTRRLTNTPEQERSIDISADGRTIVYAGERN 375

Query: 280 EAMDIYSVDLQSNATERLTN-----------TLFINISASYSPDSSQIVFESDREGKEQL 328
            + ++Y+  L +   +  TN                    +SP    + +  DR    +L
Sbjct: 376 NSWNLYTQTLSNKDEKYFTNALELKEAILLENKAETFQPKFSPSGDDVAYLEDRT---KL 432

Query: 329 YVMQSNGSDQKRISQDKEASYF-----DPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGS 381
             +         I   ++   +     D  WSP G   A T +    +   IG++  +G 
Sbjct: 433 KTINLKSKKITSIHNGEKHFSYADGDQDFEWSPDGKWFAITFYPDRYWVGEIGIVSANGD 492

Query: 382 QERLLVE--DSNLQAPTWSPSGRSLIFSRKKDG 412
           Q+ + V     +   P WS  G  L ++  + G
Sbjct: 493 QKLINVSKSGFSDFYPQWSKDGSILYWASDRSG 525



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 81/234 (34%), Gaps = 34/234 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN Q++A+    D     +YL+     +A  R+         P +S +G +   S  
Sbjct: 33  AISPNGQQIAFTYNAD-----IYLVSVNGGKAT-RLTTHSDYDTKPVWSHDGSKIAFSSN 86

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE---------QL 328
           +    D++ +       +RLT     + +  +S    +I F S R   +         +L
Sbjct: 87  RHGNFDVFVIASNGGNIKRLTFHSADDWATDFSQKDDEIWFNSIRLDNQKSMLFHQLGEL 146

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAIGVM 376
           Y +  N    K++         +     +GD I F               S     I + 
Sbjct: 147 YSVSLNAELPKQLLSMPAYEARNNA---KGD-ILFEEIKGYEDQWRKHHTSSVTRDIWIK 202

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           K  G  ++L   +   + P +  +     +  +  G     +Y   L+  NET+
Sbjct: 203 KASGEYQKLSDFNGEDRNPVFGSNDTF-YYLSEMSGT--INVYQSSLSNPNETI 253



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 7/108 (6%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ER 384
             ++      ++      ++   + +   SP G  IAFT  +     I ++  +G +  R
Sbjct: 6   PLIFAFTFFTTEILLAQSNENLWFRNTAISPNGQQIAFTYNAD----IYLVSVNGGKATR 61

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           L         P WS  G  + FS  + G+    ++ I  NG N   + 
Sbjct: 62  LTTHSDYDTKPVWSHDGSKIAFSSNRHGNF--DVFVIASNGGNIKRLT 107



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 75/206 (36%), Gaps = 27/206 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  +     DG+  R LT + +Q       S + + + YA   + +        T  ++
Sbjct: 332 YRGDVFATSVDGSLTRRLTNTPEQ-ERSIDISADGRTIVYA--GERNNSWNLYTQTLSNK 388

Query: 249 APKRIGNF-----------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             K   N            ++    P+FS +G         ++   + +++L+S     +
Sbjct: 389 DEKYFTNALELKEAILLENKAETFQPKFSPSGDDVAY---LEDRTKLKTINLKSKKITSI 445

Query: 298 TNTL------FINISASYSPDSSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKEA-S 348
            N          +    +SPD       F  DR    ++ ++ +NG DQK I+  K   S
Sbjct: 446 HNGEKHFSYADGDQDFEWSPDGKWFAITFYPDRYWVGEIGIVSANG-DQKLINVSKSGFS 504

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIG 374
            F P WS  G ++ +        ++ 
Sbjct: 505 DFYPQWSKDGSILYWASDRSGMHSVA 530



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/354 (12%), Positives = 111/354 (31%), Gaps = 87/354 (24%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           +I  + + E   F +  +  +   ++      + ++  +G     LT   D    +P +S
Sbjct: 17  EILLAQSNENLWFRNTAISPNGQQIAFTYNADIYLVSVNGGKATRLTTHSD-YDTKPVWS 75

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            +  K+A+++    +   V+++ +      KR+    +   A  FS        +  + +
Sbjct: 76  HDGSKIAFSSNRHGN-FDVFVIASN-GGNIKRLTFHSADDWATDFSQKDDEIWFNSIRLD 133

Query: 281 AM---------DIYSVDLQSNATERL---------------------------------- 297
                      ++YSV L +   ++L                                  
Sbjct: 134 NQKSMLFHQLGELYSVSLNAELPKQLLSMPAYEARNNAKGDILFEEIKGYEDQWRKHHTS 193

Query: 298 ------------------TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                             ++    + +  +  +     + S+  G   +Y    +  ++ 
Sbjct: 194 SVTRDIWIKKASGEYQKLSDFNGEDRNPVFGSN-DTFYYLSEMSGTINVYQSSLSNPNET 252

Query: 340 ---------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS----QERLL 386
                     +     ++     +S  G    +T+  GEK  +  +   G     Q  LL
Sbjct: 253 IQISDFKMHPVRHLSTSNTGVLCYSFNGQ--IYTQIPGEKPKLITVDVSGDTSLLQNELL 310

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASD 439
             +  ++    SP+G+ LIF  +        +++  ++G     L NTP     
Sbjct: 311 FVNGGVREMKPSPNGKELIFIYR------GDVFATSVDGSLTRRLTNTPEQERS 358



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 24/57 (42%), Gaps = 13/57 (22%)

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGF 445
             SP+G+ + F+   D      +Y + +NG   T + T       P ++ D   + F
Sbjct: 33  AISPNGQQIAFTYNAD------IYLVSVNGGKATRLTTHSDYDTKPVWSHDGSKIAF 83


>gi|114569665|ref|YP_756345.1| peptidase S9 prolyl oligopeptidase [Maricaulis maris MCS10]
 gi|114340127|gb|ABI65407.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Maricaulis maris MCS10]
          Length = 701

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 86/290 (29%), Gaps = 58/290 (20%)

Query: 212 QILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           +    P  SP+ ++VAY    ++           +        + +    +   +PR+S 
Sbjct: 50  EAASAPSISPDGERVAYVRRTNDVKSDQTRSSIWLVRADGSHHEPLSADGAASGSPRWSP 109

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV---------- 317
           +G+    +   +  + + +     +    +T         ++SPD +++           
Sbjct: 110 DGQTLAYTYAGEAGVSLRTRSRDGSD-SLVTELPGAPGGLAWSPDGNRLAWSMFKALPGP 168

Query: 318 -------------------------FESDREGK-----EQLYVMQSNGSDQKRISQDKEA 347
                                    F  D  G      +Q Y++         +S+D   
Sbjct: 169 VAAALPAAAEDAERAAPAVVENRLTFRLDGAGNIPPGIQQFYMIDLRTGTTTLLSEDGLG 228

Query: 348 SYFDPVWSPQGDLIAFTKFS-------GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
              D VW+  G  + F+               +  +         L +      +P  SP
Sbjct: 229 GSGDFVWANDGASLIFSADRRPQLGQLPPDSELHRLDIATGDVTQLTDRAGPDASPRASP 288

Query: 400 SGRSLIFSRKKD---GDTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
            G+ + +    D   G   ++LY +   G     +         +PQW G
Sbjct: 289 DGQWIAYLGYDDHRMGYHNTELYIVPSGGGTARSLTASLDRSVGNPQWAG 338



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 79/247 (31%), Gaps = 53/247 (21%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD------------- 232
           +G    SL    RDG++   L            +SP+  ++A++ +              
Sbjct: 119 AGEAGVSLRTRSRDGSD--SLVTELPGAPGGLAWSPDGNRLAWSMFKALPGPVAAALPAA 176

Query: 233 --------------------------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                                        I + Y++D R         +         ++
Sbjct: 177 AEDAERAAPAVVENRLTFRLDGAGNIPPGIQQFYMIDLRTGTTTLLSEDGLGGSGDFVWA 236

Query: 267 SNGKRALISVQK-------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           ++G   + S  +           +++ +D+ +    +LT+    + S   SPD   I + 
Sbjct: 237 NDGASLIFSADRRPQLGQLPPDSELHRLDIATGDVTQLTDRAGPDASPRASPDGQWIAYL 296

Query: 320 S---DREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                R G    +LY++ S G   + ++   + S  +P W+     +           +G
Sbjct: 297 GYDDHRMGYHNTELYIVPSGGGTARSLTASLDRSVGNPQWAGDSSGLYVQFDDRGTTRVG 356

Query: 375 VMKKDGS 381
            +  DGS
Sbjct: 357 FVALDGS 363


>gi|150008116|ref|YP_001302859.1| putative peptidase [Parabacteroides distasonis ATCC 8503]
 gi|149936540|gb|ABR43237.1| putative peptidase [Parabacteroides distasonis ATCC 8503]
          Length = 703

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/308 (17%), Positives = 107/308 (34%), Gaps = 63/308 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           ++I F+     S    + L  M+ DG + + L+     I     FSP+++KV + +    
Sbjct: 119 TKIAFLCNESGS----SQLWEMNPDGTDRKRLSDYDKDIEGF-AFSPDEKKVLFISQVKT 173

Query: 232 ---------DDEDILRVYLMDTRIDRAPKRIGNFR------------------------- 257
                    D +    V + D       + +                             
Sbjct: 174 VNSTADKYPDLDKATGVIITDLMYKHWDEWVTTVPHPFVADFDGESISNPVDVMEGELFE 233

Query: 258 ------SMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLF 302
                   I    +++   +   + +K            DIY  DL +  T  +T     
Sbjct: 234 SPMKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKG 293

Query: 303 INISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + + +YSPD   I + S +R+G    + +L VM     ++  +S+D +++     WS  
Sbjct: 294 YDTNPTYSPDGKSIAWLSMERDGYEADQNRLMVMNLETGEKTFVSKDFDSNVDSYCWSAD 353

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              I FT     +  +  +      +   + +      + +  G  LI +++     G +
Sbjct: 354 CKRIYFTGVWHGESQVYQIDLANGNKITPLTEGMYDYASVALLGDKLI-AQRHSMSMGDE 412

Query: 418 LYSIDLNG 425
           +YSIDL G
Sbjct: 413 IYSIDLTG 420



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 87/247 (35%), Gaps = 61/247 (24%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S +GKR + +V      +     +++ ++   +  +++T T F    A +  
Sbjct: 57  GRIGGMNVSPDGKRVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTGFAENEAVWIK 116

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
             ++I F  +  G  QL+ M  +G+D+KR+S D +       +SP    + F        
Sbjct: 117 GGTKIAFLCNESGSSQLWEMNPDGTDRKRLS-DYDKDIEGFAFSPDEKKVLFISQVKTVN 175

Query: 367 -SGEKF---------------------------AIGVMKKDG---SQERLLVEDSNLQAP 395
            + +K+                              V   DG   S    ++E    ++P
Sbjct: 176 STADKYPDLDKATGVIITDLMYKHWDEWVTTVPHPFVADFDGESISNPVDVMEGELFESP 235

Query: 396 ----------TWSPSGRSLIFSRKKDGD------TGSKLYSIDLNGRNETLIN--TPAYA 437
                      W+ +   + ++ +K         T S +Y  DLN +  T I      Y 
Sbjct: 236 MKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKGYD 295

Query: 438 SDPQWVG 444
           ++P +  
Sbjct: 296 TNPTYSP 302



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/322 (17%), Positives = 114/322 (35%), Gaps = 67/322 (20%)

Query: 176 RILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           R+++     SV        + VM+ DG++ + +T +      E  +     K+A+   + 
Sbjct: 70  RVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTG-FAENEAVWIKGGTKIAFLCNES 128

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------------DE 280
                  +     DR  KR+ ++   I    FS + K+ L   Q              D+
Sbjct: 129 GSSQLWEMNPDGTDR--KRLSDYDKDIEGFAFSPDEKKVLFISQVKTVNSTADKYPDLDK 186

Query: 281 AMDIYSVDLQSNAT-ERLTNTLF--------------INI-------SA----------S 308
           A  +   DL      E +T                  +++       S           +
Sbjct: 187 ATGVIITDLMYKHWDEWVTTVPHPFVADFDGESISNPVDVMEGELFESPMKPFGGIEQLA 246

Query: 309 YSPDSSQIVFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           ++  S +I + S +             +YV   N      I+++ +    +P +SP G  
Sbjct: 247 WNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKGYDTNPTYSPDGKS 306

Query: 361 IAFTKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGD 413
           IA+     + +      + VM  +  ++  + +  DSN+ +  WS   + + F+    G+
Sbjct: 307 IAWLSMERDGYEADQNRLMVMNLETGEKTFVSKDFDSNVDSYCWSADCKRIYFTGVWHGE 366

Query: 414 TGSKLYSIDLNGRNETLINTPA 435
             S++Y IDL   N+    T  
Sbjct: 367 --SQVYQIDLANGNKITPLTEG 386



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 88/274 (32%), Gaps = 61/274 (22%)

Query: 220 SPNQQKV----AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ ++V    AY +  +    R   +        K+I           +   G +    
Sbjct: 65  SPDGKRVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTGFAENEAVWIKGGTKIAFL 124

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------------- 321
             +  +  ++ ++      +RL++        ++SPD  +++F S               
Sbjct: 125 CNESGSSQLWEMNPDGTDRKRLSDYDKDIEGFAFSPDEKKVLFISQVKTVNSTADKYPDL 184

Query: 322 -------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDP---------- 352
                                     +V   +G          E   F+           
Sbjct: 185 DKATGVIITDLMYKHWDEWVTTVPHPFVADFDGESISNPVDVMEGELFESPMKPFGGIEQ 244

Query: 353 -VWSPQGDLIAFTKF--SGEKF------AIGVMKKDGSQERLLVED--SNLQAPTWSPSG 401
             W+   D IA+T    +G+++       I V   +  Q   + E+       PT+SP G
Sbjct: 245 LAWNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKGYDTNPTYSPDG 304

Query: 402 RSLIFSR-KKDGDTGSK--LYSIDLNGRNETLIN 432
           +S+ +   ++DG    +  L  ++L    +T ++
Sbjct: 305 KSIAWLSMERDGYEADQNRLMVMNLETGEKTFVS 338



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 69/219 (31%), Gaps = 26/219 (11%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEP-----------RFSPNQQKVAYAT-------YDDED 235
            V D DG +I       +  LFE             ++    K+AY +       Y    
Sbjct: 211 FVADFDGESISNPVDVMEGELFESPMKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYAIST 270

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEA----MDIYSVDLQ 290
              +Y+ D    +        +     P +S +GK     S+++D        +  ++L+
Sbjct: 271 NSDIYVYDLNTKQTTNITEENKGYDTNPTYSPDGKSIAWLSMERDGYEADQNRLMVMNLE 330

Query: 291 SNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +     ++     N+ +  +S D  +I F     G+ Q+Y +     ++     +    Y
Sbjct: 331 TGEKTFVSKDFDSNVDSYCWSADCKRIYFTGVWHGESQVYQIDLANGNKITPLTEGMYDY 390

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLV 387
                     LIA          I  +   G      L 
Sbjct: 391 ASVALLGD-KLIAQRHSMSMGDEIYSIDLTGDHTVTQLT 428


>gi|254413766|ref|ZP_05027535.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
            PCC 7420]
 gi|196179363|gb|EDX74358.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
            PCC 7420]
          Length = 1508

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 53/306 (17%), Positives = 109/306 (35%), Gaps = 28/306 (9%)

Query: 112  VTGRVIKEGKDRLRVEFRLWDVKD----RKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
            V   V      R+     L            ++G    +S  S R  +   +D+ Y+ + 
Sbjct: 1179 VVTSVSFSPDGRIIASASLDKTVKLWSIDGSLVGNCPNNSEPSPRLESTNSTDNSYRRL- 1237

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                 F+       + + S     ++ +   DG  ++ L       +    FSP+ Q + 
Sbjct: 1238 ----VFSVSFSPDGQIIASASEDYTIKLWRIDGTLLQTL-KGHSGGVNSISFSPDGQVIT 1292

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A+ D      V L            G+   +  +  FS +G+    S   D  + ++ +
Sbjct: 1293 SASRD----YTVKLWTLNGTLLHTMEGHRSGVN-SVSFSPDGQMIA-SASCDNTVKLWRI 1346

Query: 288  DLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D      ER  +    ++   S+SPD   I   S       + + + +GS ++  ++  E
Sbjct: 1347 D---GFLERTFHGHNSSVFCVSFSPDGQLIASASY---DCTVKLWRLDGSLERTFTRQNE 1400

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
             S +   +SP G +I    F G    + + + DG+  +        + + ++SP G  + 
Sbjct: 1401 -SVYSVSFSPDGQMIISASFDGT---VKLWRIDGTLIQTFQGHSGGVASASFSPDGEMIA 1456

Query: 406  FSRKKD 411
             +    
Sbjct: 1457 SASHDH 1462



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 56/291 (19%), Positives = 103/291 (35%), Gaps = 62/291 (21%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE------DILR 238
            VSG    +L +   DG  +         ++    FSP+ + +A A+ D        D   
Sbjct: 1152 VSGGGDGTLKLWKIDGT-LEQTFQGHSNVVTSVSFSPDGRIIASASLDKTVKLWSIDGSL 1210

Query: 239  VYLMDTRIDRAPKRIG------NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            V       + +P+         ++R ++ +  FS +G+    S  +D  + ++ +D    
Sbjct: 1211 VGNCPNNSEPSPRLESTNSTDNSYRRLVFSVSFSPDGQIIA-SASEDYTIKLWRID--GT 1267

Query: 293  ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ-------------------- 332
              + L        S S+SPD   I   S R+   +L+ +                     
Sbjct: 1268 LLQTLKGHSGGVNSISFSPDGQVITSAS-RDYTVKLWTLNGTLLHTMEGHRSGVNSVSFS 1326

Query: 333  SNG------------------SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             +G                     +R      +S F   +SP G LIA   +      + 
Sbjct: 1327 PDGQMIASASCDNTVKLWRIDGFLERTFHGHNSSVFCVSFSPDGQLIASASYDCT---VK 1383

Query: 375  VMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            + + DGS ER     + ++ + ++SP G+ +I       D   KL+ ID  
Sbjct: 1384 LWRLDGSLERTFTRQNESVYSVSFSPDGQMII---SASFDGTVKLWRIDGT 1431



 Score = 93.5 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 52/318 (16%), Positives = 115/318 (36%), Gaps = 46/318 (14%)

Query: 124  LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--- 180
              V F      D + I+      +   WR       D                ++F    
Sbjct: 1057 YSVNFS----PDGQMIVSASLDGTVKLWR------VDGTLVQTFPAHPSGVKSVIFSPNG 1106

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 +G    S+ +   DG  ++   P   + +    FSP+ Q +   +   +  L+++
Sbjct: 1107 QMIASAGSNDPSIKLWKTDGT-LKQKFPGHQKGVQTISFSPDGQMI--VSGGGDGTLKLW 1163

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--------SN 292
             +D  +++  +      +++ +  FS +G+    S   D+ + ++S+D          S 
Sbjct: 1164 KIDGTLEQTFQ---GHSNVVTSVSFSPDGRIIA-SASLDKTVKLWSIDGSLVGNCPNNSE 1219

Query: 293  ATERLTNTLFIN-------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             + RL +T   +        S S+SPD   I   S+      + + + +G+  + + +  
Sbjct: 1220 PSPRLESTNSTDNSYRRLVFSVSFSPDGQIIASASE---DYTIKLWRIDGTLLQTL-KGH 1275

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSL 404
                    +SP G +I         + + +   +G+    +    S + + ++SP G+ +
Sbjct: 1276 SGGVNSISFSPDGQVITSASRD---YTVKLWTLNGTLLHTMEGHRSGVNSVSFSPDGQMI 1332

Query: 405  IFSRKKDGDTGSKLYSID 422
                    D   KL+ ID
Sbjct: 1333 A---SASCDNTVKLWRID 1347



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 73/184 (39%), Gaps = 13/184 (7%)

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
               +  +   R+     ++ +  FS +G+  + S   D  + ++ VD      +      
Sbjct: 1038 QTIQQMQEYNRLEGHNGLVYSVNFSPDGQMIV-SASLDGTVKLWRVD--GTLVQTFPAHP 1094

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S  +SP+   I   S       + + +++G+  K+     +       +SP G +I
Sbjct: 1095 SGVKSVIFSPNGQMIA--SAGSNDPSIKLWKTDGT-LKQKFPGHQKGVQTISFSPDGQMI 1151

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                  G    + + K DG+ E+     SN + + ++SP GR +  +     D   KL+S
Sbjct: 1152 V---SGGGDGTLKLWKIDGTLEQTFQGHSNVVTSVSFSPDGRIIASASL---DKTVKLWS 1205

Query: 421  IDLN 424
            ID +
Sbjct: 1206 IDGS 1209



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 87/236 (36%), Gaps = 35/236 (14%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +++   FSP+ Q +  A+ D    ++++ +D       +      S + +  FS
Sbjct: 1049 LEGHNGLVYSVNFSPDGQMIVSASLD--GTVKLWRVD---GTLVQTFPAHPSGVKSVIFS 1103

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             NG+    +   D ++ ++  D      ++         + S+SPD   IV      G  
Sbjct: 1104 PNGQMIASAGSNDPSIKLWKTD--GTLKQKFPGHQKGVQTISFSPDGQMIV---SGGGDG 1158

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS----- 381
             L + + +G+  ++  Q          +SP G +IA          + +   DGS     
Sbjct: 1159 TLKLWKIDGT-LEQTFQGHSNVVTSVSFSPDGRIIASASLDKT---VKLWSIDGSLVGNC 1214

Query: 382  ------QERLLVEDSNLQ-------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                    RL   +S          + ++SP G+ +  + +   D   KL+ ID  
Sbjct: 1215 PNNSEPSPRLESTNSTDNSYRRLVFSVSFSPDGQIIASASE---DYTIKLWRIDGT 1267


>gi|145508654|ref|XP_001440272.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407487|emb|CAK72875.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1142

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 49/320 (15%), Positives = 106/320 (33%), Gaps = 38/320 (11%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K          RLW+VK  +Q             +   H    D+        G     
Sbjct: 435 TKLASGSADKSIRLWNVKTGQQ-----------QAKLDGHLC--DVRSVCFSPDG----- 476

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG    S+ +   +    +         ++   FSP+   +A  +YD+   
Sbjct: 477 -----TTLASGSDDKSIRLWSVNTGQQKTKLNGHSSYVYTVCFSPDGTILASGSYDN--- 528

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             ++L D        ++      +    FS +G +        +A  I+  D+++   + 
Sbjct: 529 -SIHLWDVATVSLKAKLDGHSGYVYEVCFSPDGTKLA---SGSDAKSIHLWDVKTGQQKA 584

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +        +S  +SPD + +   S     + +++      +QK      + S     +S
Sbjct: 585 KFEGHSGGILSVCFSPDGNTLASGS---ADKSIHLWDVKKGEQKAKFDGHQYSVTSVRFS 641

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P G ++A +  + +   +  +K    + +L    S +    +SP G +L        D  
Sbjct: 642 PDGTILA-SGSADKTIRLWDVKTGQQKTKLDGHSSLVLLVCFSPDGTTLASGSD---DNS 697

Query: 416 SKLYSIDLNGRNETLINTPA 435
            +L+ +    +N        
Sbjct: 698 IRLWDVKTGQQNAKFDGHSG 717



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 52/325 (16%), Positives = 102/325 (31%), Gaps = 45/325 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLW V   +Q                 H  S  +Y       G     
Sbjct: 477 TTLASGSDDKSIRLWSVNTGQQKTKLN-----------GH--SSYVYTVCFSPDGTIL-- 521

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                    SG   NS+ + D    +++         ++E  FSP+  K+A       D 
Sbjct: 522 --------ASGSYDNSIHLWDVATVSLKAKLDGHSGYVYEVCFSPDGTKLA----SGSDA 569

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             ++L D +  +   +       IL+  FS +G     S   D+++ ++  D++    + 
Sbjct: 570 KSIHLWDVKTGQQKAKFEGHSGGILSVCFSPDGNTLA-SGSADKSIHLW--DVKKGEQKA 626

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +     +   S  +SPD + +   S     + + +       QK       +      +S
Sbjct: 627 KFDGHQYSVTSVRFSPDGTILASGS---ADKTIRLWDVKTGQQKTKLDGHSSLVLLVCFS 683

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGD 413
           P G  +A          I +      Q+    +     + +  +SP G +L        D
Sbjct: 684 PDGTTLASGSDDNS---IRLWDVKTGQQNAKFDGHSGRILSVCFSPDGATLA---SGSAD 737

Query: 414 TGSKLYSIDLNGRNETLINTPAYAS 438
              +L+        + L+    ++S
Sbjct: 738 ETIRLWDAK---TGQQLVKLNGHSS 759



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 105/312 (33%), Gaps = 39/312 (12%)

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
                 RLWD    +Q             +   H+             G  ++       
Sbjct: 399 SYDNSLRLWDATTGQQ-----------KAKFEGHS------------GGISSACFSLDGT 435

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + SG    S+ + +      +         +    FSP+   +A  + D      + L 
Sbjct: 436 KLASGSADKSIRLWNVKTGQQQAKLDGHLCDVRSVCFSPDGTTLASGSDDK----SIRLW 491

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTL 301
                +   ++    S +    FS +G   L S   D ++ ++  D+ + + + +L    
Sbjct: 492 SVNTGQQKTKLNGHSSYVYTVCFSPDGT-ILASGSYDNSIHLW--DVATVSLKAKLDGHS 548

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  +SPD +++   SD    + +++       QK   +          +SP G+ +
Sbjct: 549 GYVYEVCFSPDGTKLASGSD---AKSIHLWDVKTGQQKAKFEGHSGGILSVCFSPDGNTL 605

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A +  + +   +  +KK   + +      ++ +  +SP G  L        D   +L+ +
Sbjct: 606 A-SGSADKSIHLWDVKKGEQKAKFDGHQYSVTSVRFSPDGTILA---SGSADKTIRLWDV 661

Query: 422 DLNGRNETLINT 433
              G+ +T ++ 
Sbjct: 662 K-TGQQKTKLDG 672



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 83/241 (34%), Gaps = 17/241 (7%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++VS    NSL + D      +         +    FS +  K+A  + D      + L 
Sbjct: 394 TIVSASYDNSLRLWDATTGQQKAKFEGHSGGISSACFSLDGTKLASGSADK----SIRLW 449

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +  +   ++      + +  FS +G     S   D+++ ++SV+       +L     
Sbjct: 450 NVKTGQQQAKLDGHLCDVRSVCFSPDGTTLA-SGSDDKSIRLWSVN-TGQQKTKLNGHSS 507

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              +  +SPD + +   S       +++        K          ++  +SP G  +A
Sbjct: 508 YVYTVCFSPDGTILASGSY---DNSIHLWDVATVSLKAKLDGHSGYVYEVCFSPDGTKLA 564

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               +     I +      Q++   E     + +  +SP G +L        D    L+ 
Sbjct: 565 SGSDAKS---IHLWDVKTGQQKAKFEGHSGGILSVCFSPDGNTLA---SGSADKSIHLWD 618

Query: 421 I 421
           +
Sbjct: 619 V 619



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 107/316 (33%), Gaps = 49/316 (15%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  +Q           + +   H  S  I        G     
Sbjct: 687 TTLASGSDDNSIRLWDVKTGQQ-----------NAKFDGH--SGRILSVCFSPDGA---- 729

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG    ++ + D                +    FSP+  K+A       D 
Sbjct: 730 ------TLASGSADETIRLWDAKTGQQLVKLNGHSSQVLSVCFSPDGTKLA----SGSDA 779

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             +YL D +  +   +       IL+  FS +G     S   D+++ ++  D+++   + 
Sbjct: 780 KSIYLWDVKTGQQKAKFDGHSGGILSVCFSPDGTTLA-SGSADKSIRLW--DVKTGYQKA 836

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPV 353
           +     +   S  +S D + +   S  +    L+ ++      K  S   + +   F P 
Sbjct: 837 KFDGHQYTVTSVRFSLDGT-LASCSY-DKFISLWNVKIGQQKTKLDSHFGQDNTIRFSPR 894

Query: 354 W------SPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRSLI 405
           W      SP G+++AF     +  +I ++       + +L      + +  +SP G +L 
Sbjct: 895 WVCAICFSPDGNILAFGS---KDHSIRLLDVKTGYQKAKLDGHTQKVNSVCFSPDGTTLA 951

Query: 406 FSRKKDGDTGSKLYSI 421
                  D   +L+ +
Sbjct: 952 SCSD---DNTIRLWKV 964



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 80/226 (35%), Gaps = 17/226 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y        +    FS +   +  A+YD+     + L D    +   +       I +  
Sbjct: 374 YKIDGHSGDVTSVNFSTDGTTIVSASYDN----SLRLWDATTGQQKAKFEGHSGGISSAC 429

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G +   S   D+++ ++  ++++   + +L   L    S  +SPD + +   SD  
Sbjct: 430 FSLDGTKLA-SGSADKSIRLW--NVKTGQQQAKLDGHLCDVRSVCFSPDGTTLASGSD-- 484

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +   N   QK       +  +   +SP G ++A   +      +  +     + 
Sbjct: 485 -DKSIRLWSVNTGQQKTKLNGHSSYVYTVCFSPDGTILASGSYDNS-IHLWDVATVSLKA 542

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +L      +    +SP G  L       G     ++  D+    + 
Sbjct: 543 KLDGHSGYVYEVCFSPDGTKLA-----SGSDAKSIHLWDVKTGQQK 583


>gi|73670801|ref|YP_306816.1| hypothetical protein Mbar_A3363 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397963|gb|AAZ72236.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 565

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 78/383 (20%), Positives = 133/383 (34%), Gaps = 69/383 (18%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR-- 136
           FN+ S D   Q  T    +     W+  G  +LVT   +    + +   + L D      
Sbjct: 32  FNVTSLDKILQ--TEGGFVVSSTAWSPDGHYLLVTCSKLISRSNSIYKHY-LLDTNSHTF 88

Query: 137 -----KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
                       +  S   W        D IY  I    G  +S   F+           
Sbjct: 89  GEINYGIKEFSSYSVSKVEWSPSG----DRIYFRILKFAGPTDSGSCFI----------- 133

Query: 192 SLCVMDRDGANIRYLTP------------SRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              V + DG N+R L                       ++SP+  K+A+     E+I   
Sbjct: 134 ---VCNPDGTNLRGLGTNYTSLSDVIENLGSMGFQNNLKWSPDSSKIAFEWQKPENIFSG 190

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             +          I   RS    P +  +  + +  +     +++  +D   ++ +  T 
Sbjct: 191 VYISNGNGTNTHEI---RSEASQPVW-YDSTK-VFILSHKGIVEL--IDDNGDSIQ--TF 241

Query: 300 TLFINIS----ASYSPDSSQIVFESDREGKEQL--YVMQSNGSDQKR-ISQDKEAS---Y 349
                       S SPD  +I+F S   G   L  Y+  ++GS  +  +S   +      
Sbjct: 242 HPENKNEQYCVFSVSPDKRKIIFVSGLPGSHNLQTYISNTDGSKLRGNVSHYGDTDEHIL 301

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               W P G L+      G    + +++ + + +RLL E  N   P W P G+ ++F   
Sbjct: 302 TKEYWQPNGSLLL-VNQDGS---LYIVEGNENNKRLLYE-GNATNPQWFPDGKKILFVTN 356

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           K+     KLYSI+++G N T I 
Sbjct: 357 KN-----KLYSINVDGTNLTFIT 374



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 105/282 (37%), Gaps = 45/282 (15%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-SRDQILFE 216
           IS+    +    + + +  + + S  V     K  + ++D +G +I+   P ++++    
Sbjct: 193 ISNGNGTNTHEIRSEASQPVWYDSTKVFILSHKGIVELIDDNGDSIQTFHPENKNEQYCV 252

Query: 217 PRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKR 271
              SP+++K+ + +       L+ Y+ +T   +    + ++            +  NG  
Sbjct: 253 FSVSPDKRKIIFVSGLPGSHNLQTYISNTDGSKLRGNVSHYGDTDEHILTKEYWQPNGSL 312

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L+    ++   +Y V+   N    L        +  + PD  +I+F ++   K +LY +
Sbjct: 313 LLV----NQDGSLYIVEGNENNKRLL--YEGNATNPQWFPDGKKILFVTN---KNKLYSI 363

Query: 332 QSNGSDQKRIS-QDKEASYFDP--------VWSPQGDLIAFTK----------------- 365
             +G++   I+      SYF            SP G++IAFT                  
Sbjct: 364 NVDGTNLTFITNFGLTTSYFWSLYKEAKQFSISPSGNIIAFTSALYPDTGKIIESEPDPS 423

Query: 366 -FSGEKFAIGVMKKDGSQERLLVED--SNLQAP-TWSPSGRS 403
                   + ++  DGS    +        +    WSP+G+ 
Sbjct: 424 TRQNIAVPLFIVNSDGSNLTQVTPTIKGLYEMFGEWSPNGKQ 465



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 59/173 (34%), Gaps = 30/173 (17%)

Query: 298 TNTLFINISASYSPDSSQIVFE-----SDREGKEQLYVMQSN----GSDQKRISQDKEAS 348
           T   F+  S ++SPD   ++       S      + Y++ +N    G     I +    S
Sbjct: 43  TEGGFVVSSTAWSPDGHYLLVTCSKLISRSNSIYKHYLLDTNSHTFGEINYGIKEFSSYS 102

Query: 349 YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT------- 396
                WSP GD I F        +       V   DG+  R L  +    +         
Sbjct: 103 VSKVEWSPSGDRIYFRILKFAGPTDSGSCFIVCNPDGTNLRGLGTNYTSLSDVIENLGSM 162

Query: 397 -------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                  WSP    + F  +K  +  S +Y  + NG N   I +   AS P W
Sbjct: 163 GFQNNLKWSPDSSKIAFEWQKPENIFSGVYISNGNGTNTHEIRS--EASQPVW 213


>gi|332661894|ref|YP_004451363.1| (myosin heavy-chain) kinase [Haliscomenobacter hydrossis DSM 1100]
 gi|332337391|gb|AEE54490.1| (Myosin heavy-chain) kinase [Haliscomenobacter hydrossis DSM 1100]
          Length = 788

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 92/272 (33%), Gaps = 18/272 (6%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G ++       + + +G    S  + D +              ++   FSP+ +++A  +
Sbjct: 418 GVWSVAFSADGKRLATGSKDKSAKIWDLESGKQTLNLQGHTAYVWSVAFSPDGKRLATGS 477

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D        + D    +    +    S + +  FS + KR   +   D    I+ +D  
Sbjct: 478 QDK----TAKIWDLEAGKQTLNLQGHTSAVWSVAFSPDRKRLA-TGSDDNTAKIWDLD-S 531

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 L        S ++SPD  ++   S     +   +       Q    Q       
Sbjct: 532 GKQILNLQGHTDDVWSVAFSPDGKRLATGSQ---DKTAKIWDLQSGKQTLSLQGHTDDVN 588

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLI-FS 407
              +SP G  +A          + +   +  ++ L ++    ++ + T+SP G+ L  +S
Sbjct: 589 SVAFSPNGKRLATGSQDTT---VKIWDLESGKQTLTLQGHTDDVMSVTFSPDGKRLATWS 645

Query: 408 RKKDG---DTGSKLYSIDLNGRNETLINTPAY 436
           R +     D  S+ +     G+N  L     +
Sbjct: 646 RDQSAKFWDFTSEGWLSTPQGKNRLLSVLDGF 677



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 94/273 (34%), Gaps = 17/273 (6%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G +++      + + +G    +  + D D              ++   FSP+ +++A  +
Sbjct: 292 GVWSAAFSLDGKRLATGSEDKTAKIWDLDSGEQTLNLQGHTAGVWSVAFSPDGKRLATGS 351

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D+       + D    +    +    + + +  FS +GKR   +  +DE   I++ +  
Sbjct: 352 DDN----SAKIWDLDSGKQTFNLQGHAAGVWSVAFSHDGKRLA-TGSEDETAKIWNFE-S 405

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              T  L        S ++S D  ++   S     +   +       Q    Q   A  +
Sbjct: 406 GKQTLNLEGHTAGVWSVAFSADGKRLATGSK---DKSAKIWDLESGKQTLNLQGHTAYVW 462

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              +SP G  +A          I  ++       L    S + +  +SP  + L      
Sbjct: 463 SVAFSPDGKRLATGSQDKTA-KIWDLEAGKQTLNLQGHTSAVWSVAFSPDRKRLATGSD- 520

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             D  +K++ +D     + ++N   +  D  W 
Sbjct: 521 --DNTAKIWDLD---SGKQILNLQGHTDD-VWS 547



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 91/264 (34%), Gaps = 15/264 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G ++       + + +G    +  + + +              ++   FS + +++A
Sbjct: 373 HAAGVWSVAFSHDGKRLATGSEDETAKIWNFESGKQTLNLEGHTAGVWSVAFSADGKRLA 432

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D        + D    +    +    + + +  FS +GKR   +  +D+   I+ +
Sbjct: 433 TGSKDK----SAKIWDLESGKQTLNLQGHTAYVWSVAFSPDGKRLA-TGSQDKTAKIWDL 487

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +     T  L        S ++SPD  ++   SD        +   +   Q    Q    
Sbjct: 488 EA-GKQTLNLQGHTSAVWSVAFSPDRKRLATGSD---DNTAKIWDLDSGKQILNLQGHTD 543

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
             +   +SP G  +A          I  ++       L     ++ +  +SP+G+ L   
Sbjct: 544 DVWSVAFSPDGKRLATGSQDKTA-KIWDLQSGKQTLSLQGHTDDVNSVAFSPNGKRLATG 602

Query: 408 RKKDGDTGSKLYSIDLNGRNETLI 431
            +   DT  K++  DL    +TL 
Sbjct: 603 SQ---DTTVKIW--DLESGKQTLT 621



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 99/275 (36%), Gaps = 25/275 (9%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEK-GDFNSRI---LFVSESVVSGIIKNSLCVMDRDG 200
            +S    + ++   +D  Y+S+T  + GD  +     +F    V +G    +  +++   
Sbjct: 127 TASANRLQTLSAYANDLSYKSLTALRDGDRTTAFQLAIFAYRYVETGNANVTRALVEALY 186

Query: 201 AN---IRYLTP------SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            N    R   P           +    FSP+ +++A  + D        + D    +   
Sbjct: 187 YNDVPARLTLPWSASLSGHTSSVLSIAFSPDGKRLATGSEDK----TAKIWDLESGKQIL 242

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYS 310
            +    + + +  FS +GKR   +  +D+   I+  DL+S      L        SA++S
Sbjct: 243 NLQGHTAYVWSVSFSPDGKRLA-TGSQDKTAKIW--DLESGKQTLNLKGHTAGVWSAAFS 299

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D  ++   S+    +   +   +  +Q    Q   A  +   +SP G  +A T      
Sbjct: 300 LDGKRLATGSE---DKTAKIWDLDSGEQTLNLQGHTAGVWSVAFSPDGKRLA-TGSDDNS 355

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             I  +        L    + + +  +S  G+ L 
Sbjct: 356 AKIWDLDSGKQTFNLQGHAAGVWSVAFSHDGKRLA 390



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 88/250 (35%), Gaps = 17/250 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + +G    +  + D +              ++   FSP+ +++A  + D        +
Sbjct: 219 KRLATGSEDKTAKIWDLESGKQILNLQGHTAYVWSVSFSPDGKRLATGSQDK----TAKI 274

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
            D    +    +    + + +  FS +GKR   +  +D+   I+  DL S      L   
Sbjct: 275 WDLESGKQTLNLKGHTAGVWSAAFSLDGKRLA-TGSEDKTAKIW--DLDSGEQTLNLQGH 331

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   SD        +   +   Q    Q   A  +   +S  G  
Sbjct: 332 TAGVWSVAFSPDGKRLATGSD---DNSAKIWDLDSGKQTFNLQGHAAGVWSVAFSHDGKR 388

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +A T    E   I   +       L    + + +  +S  G+ L    K   D  +K++ 
Sbjct: 389 LA-TGSEDETAKIWNFESGKQTLNLEGHTAGVWSVAFSADGKRLATGSK---DKSAKIW- 443

Query: 421 IDLNGRNETL 430
            DL    +TL
Sbjct: 444 -DLESGKQTL 452



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 55/162 (33%), Gaps = 28/162 (17%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           +WD+   KQI+  +            HT  DD++       G          + + +G  
Sbjct: 526 IWDLDSGKQILNLQ-----------GHT--DDVWSVAFSPDG----------KRLATGSQ 562

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             +  + D                +    FSPN +++A  + D      V + D    + 
Sbjct: 563 DKTAKIWDLQSGKQTLSLQGHTDDVNSVAFSPNGKRLATGSQDT----TVKIWDLESGKQ 618

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              +      +++  FS +GKR   +  +D++   +    + 
Sbjct: 619 TLTLQGHTDDVMSVTFSPDGKRLA-TWSRDQSAKFWDFTSEG 659


>gi|256840705|ref|ZP_05546213.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256737977|gb|EEU51303.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 703

 Score = 95.9 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 54/308 (17%), Positives = 108/308 (35%), Gaps = 63/308 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           ++I+F+     S    + L  M+ DG + + L+     I     FSP+++KV + +    
Sbjct: 119 TKIVFLCNESGS----SQLWEMNPDGTDRKRLSDYDKDIEGF-AFSPDEKKVLFISQVKT 173

Query: 232 ---------DDEDILRVYLMDTRIDRAPKRIGNFR------------------------- 257
                    D +    V + D       + +                             
Sbjct: 174 VNSTADKYPDLDKATGVIITDLMYKHWDEWVTTAPHPFVADFDGKSISNPVDVMEGELFE 233

Query: 258 ------SMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLF 302
                   I    +++   +   + +K            DIY  DL +  T  +T     
Sbjct: 234 SPMKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKG 293

Query: 303 INISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + + +YSPD   I + S +R+G    + +L VM     ++  +S+D +++     WS  
Sbjct: 294 YDTNPTYSPDGKSIAWLSMERDGYEADQNRLMVMNLETGEKTFVSKDFDSNVDSYCWSAD 353

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              I FT     +  +  +      +   + +      + +  G  LI +++     G +
Sbjct: 354 CKRIYFTGVWHGESQVYQIDLANGNKITPLTEGMYDYASVALLGDKLI-AQRHSMSMGDE 412

Query: 418 LYSIDLNG 425
           +YSIDL G
Sbjct: 413 IYSIDLTG 420



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 88/247 (35%), Gaps = 61/247 (24%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S +GKR + +V      +     +++ ++   +  +++T T F    A +  
Sbjct: 57  GRIGGMNVSPDGKRVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTGFAENEAVWIK 116

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
             ++IVF  +  G  QL+ M  +G+D+KR+S D +       +SP    + F        
Sbjct: 117 GGTKIVFLCNESGSSQLWEMNPDGTDRKRLS-DYDKDIEGFAFSPDEKKVLFISQVKTVN 175

Query: 367 -SGEKF---------------------------AIGVMKKDG---SQERLLVEDSNLQAP 395
            + +K+                              V   DG   S    ++E    ++P
Sbjct: 176 STADKYPDLDKATGVIITDLMYKHWDEWVTTAPHPFVADFDGKSISNPVDVMEGELFESP 235

Query: 396 ----------TWSPSGRSLIFSRKKDGD------TGSKLYSIDLNGRNETLIN--TPAYA 437
                      W+ +   + ++ +K         T S +Y  DLN +  T I      Y 
Sbjct: 236 MKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKGYD 295

Query: 438 SDPQWVG 444
           ++P +  
Sbjct: 296 TNPTYSP 302



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 89/274 (32%), Gaps = 61/274 (22%)

Query: 220 SPNQQKV----AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ ++V    AY +  +    R   +        K+I           +   G + +  
Sbjct: 65  SPDGKRVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTGFAENEAVWIKGGTKIVFL 124

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------------- 321
             +  +  ++ ++      +RL++        ++SPD  +++F S               
Sbjct: 125 CNESGSSQLWEMNPDGTDRKRLSDYDKDIEGFAFSPDEKKVLFISQVKTVNSTADKYPDL 184

Query: 322 -------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDP---------- 352
                                     +V   +G          E   F+           
Sbjct: 185 DKATGVIITDLMYKHWDEWVTTAPHPFVADFDGKSISNPVDVMEGELFESPMKPFGGIEQ 244

Query: 353 -VWSPQGDLIAFTKF--SGEKF------AIGVMKKDGSQERLLVED--SNLQAPTWSPSG 401
             W+   D IA+T    +G+++       I V   +  Q   + E+       PT+SP G
Sbjct: 245 LAWNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKGYDTNPTYSPDG 304

Query: 402 RSLIFSR-KKDGDTGSK--LYSIDLNGRNETLIN 432
           +S+ +   ++DG    +  L  ++L    +T ++
Sbjct: 305 KSIAWLSMERDGYEADQNRLMVMNLETGEKTFVS 338



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 69/219 (31%), Gaps = 26/219 (11%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEP-----------RFSPNQQKVAYAT-------YDDED 235
            V D DG +I       +  LFE             ++    K+AY +       Y    
Sbjct: 211 FVADFDGKSISNPVDVMEGELFESPMKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYAIST 270

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEA----MDIYSVDLQ 290
              +Y+ D    +        +     P +S +GK     S+++D        +  ++L+
Sbjct: 271 NSDIYVYDLNTKQTTNITEENKGYDTNPTYSPDGKSIAWLSMERDGYEADQNRLMVMNLE 330

Query: 291 SNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +     ++     N+ +  +S D  +I F     G+ Q+Y +     ++     +    Y
Sbjct: 331 TGEKTFVSKDFDSNVDSYCWSADCKRIYFTGVWHGESQVYQIDLANGNKITPLTEGMYDY 390

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLV 387
                     LIA          I  +   G      L 
Sbjct: 391 ASVALLGD-KLIAQRHSMSMGDEIYSIDLTGDHTVTQLT 428


>gi|281410787|gb|ADA68807.1| HET-E [Podospora anserina]
          Length = 336

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 87/266 (32%), Gaps = 19/266 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   F+P+ Q+VA  + D      + +
Sbjct: 18  QRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFTPDGQRVASGSDDK----TIKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R        +   I   D  S    + L   
Sbjct: 74  WDAASGTCTQTLEGHGGRVQSVAFSPDGQRVA---SGSDDHTIKIRDAASGTCTQTLEGH 130

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +S ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  
Sbjct: 131 GSSVLSVAFSPDGQRVASGS---GDKTIKIWDTASGTCTQTLEGHGDSVWSVAFSPDGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A          I +           +E     + +  +SP G+ +  S   DG    K+
Sbjct: 188 VASGSIDDT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGT--IKI 241

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           +        +TL     +     +  
Sbjct: 242 WDAASGTCTQTLEGHGGWVQSVAFSP 267



 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 79/225 (35%), Gaps = 12/225 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG   +++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 102 QRVASGSDDHTIKIRDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDK----TIKI 157

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 158 WDTASGTCTQTLEGHGDSVWSVAFSPDGQRVA-SGSIDDTIKIW--DAASGTCTQTLEGH 214

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S       + +  +      +  +          +SP G  
Sbjct: 215 GGWVHSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQR 271

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +A +  S +   I         + L      +Q+  +SP G+ + 
Sbjct: 272 VA-SGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVA 315



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 78/241 (32%), Gaps = 19/241 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ Q+VA  + D      + + DT      + +      + +  F+
Sbjct: 1   LEGHGSSVLSVAFSPDGQRVASGSDDK----TIKIWDTASGTGTQTLEGHGGSVWSVAFT 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
            +G+R   S   D+ + I+  D  S    + L        S ++SPD  ++   SD    
Sbjct: 57  PDGQRVA-SGSDDKTIKIW--DAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSD---D 110

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +  +      +  +   +S     +SP G  +A          I +          
Sbjct: 111 HTIKIRDAASGTCTQTLEGHGSSVLSVAFSPDGQRVA---SGSGDKTIKIWDTASGTCTQ 167

Query: 386 LVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +E       +  +SP G+ +      D     K++        +TL     +     + 
Sbjct: 168 TLEGHGDSVWSVAFSPDGQRVASGSIDD---TIKIWDAASGTCTQTLEGHGGWVHSVAFS 224

Query: 444 G 444
            
Sbjct: 225 P 225



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 66/206 (32%), Gaps = 14/206 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + DD     + +
Sbjct: 144 QRVASGSGDKTIKIWDTASGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDD----TIKI 199

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       + +      + +  FS +G+R   S   D  + I+  D  S    + L   
Sbjct: 200 WDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSIDGTIKIW--DAASGTCTQTLEGH 256

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S     + + +  +      +  +          +SP G  
Sbjct: 257 GGWVQSVAFSPDGQRVASGSS---DKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQR 313

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL 386
           +A          I +           
Sbjct: 314 VASGSSDNT---IKIWDTASGTCTQT 336



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 62/199 (31%), Gaps = 26/199 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDR---KQIIGK-----KFFSSPASWRKIAHTISDDIYQ---- 164
            +          ++WD       + + G          SP   R  + +I D I      
Sbjct: 144 QRVASGSGDKTIKIWDTASGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDDTIKIWDAA 203

Query: 165 -----SITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                      G +   + F    + V SG I  ++ + D                +   
Sbjct: 204 SGTCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSV 263

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q+VA  + D      + + DT      + +      + +  FS +G+R   S  
Sbjct: 264 AFSPDGQRVASGSSDK----TIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVA-SGS 318

Query: 278 KDEAMDIYSVDLQSNATER 296
            D  + I+  D  S    +
Sbjct: 319 SDNTIKIW--DTASGTCTQ 335


>gi|156035777|ref|XP_001586000.1| hypothetical protein SS1G_13092 [Sclerotinia sclerotiorum 1980]
 gi|154698497|gb|EDN98235.1| hypothetical protein SS1G_13092 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 809

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 80/218 (36%), Gaps = 17/218 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                   +++   FSP+  KVA  + D      + L D     + + +    S++ +  
Sbjct: 540 QTLEGHSSLVYSVAFSPDGTKVASGSEDK----TIRLWDAMTGESLQTLEGHSSLVYSVA 595

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G +   S  +D+ + ++   +   + + L        S ++SPD +++   S+   
Sbjct: 596 FSPDGTKVA-SGSEDKTIRLWDA-MTGESLQTLEGHSHWVNSVAFSPDGTKVASGSE--- 650

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +  +   +  +  +   +      +SP G  +A          I +      +  
Sbjct: 651 DNTIRLWDAMTGESLQTLEGHSSWVSSVAFSPDGTKVASGSRDNT---IRLWDAMTGESL 707

Query: 385 LLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +E   S + +  +SP G  +       GD   +L+ 
Sbjct: 708 QTLEGHSSLVYSVAFSPDGTKVA---SGSGDNTIRLWD 742



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 77/241 (31%), Gaps = 32/241 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K          RLWD    + +   +            H  S  +Y       G     
Sbjct: 559 TKVASGSEDKTIRLWDAMTGESLQTLE-----------GH--SSLVYSVAFSPDG----- 600

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                  V SG    ++ + D                +    FSP+  KVA  + D+   
Sbjct: 601 -----TKVASGSEDKTIRLWDAMTGESLQTLEGHSHWVNSVAFSPDGTKVASGSEDN--- 652

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L D     + + +    S + +  FS +G +   S  +D  + ++   +   + + 
Sbjct: 653 -TIRLWDAMTGESLQTLEGHSSWVSSVAFSPDGTKVA-SGSRDNTIRLWDA-MTGESLQT 709

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L     +  S ++SPD +++   S   G   + +  +   +  +  +   +      +SP
Sbjct: 710 LEGHSSLVYSVAFSPDGTKVASGS---GDNTIRLWDAMTGESLQTLEGHSSLVSSVAFSP 766

Query: 357 Q 357
            
Sbjct: 767 D 767



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 85/236 (36%), Gaps = 22/236 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--------FSPNQQKV--AYATY 231
           ES VS I  + L     D    R+L  +R  I   P         F+P    +   +   
Sbjct: 463 ESYVSKIKDSELYTFIYD--AKRFLLHNRVGIEQAPLQIYCSALFFAPENSIIRKTFQKC 520

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
               I ++    +    A + +    S++ +  FS +G +   S  +D+ + ++   +  
Sbjct: 521 IPSWIYKMSRTRSNWSAALQTLEGHSSLVYSVAFSPDGTKVA-SGSEDKTIRLWDA-MTG 578

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            + + L     +  S ++SPD +++   S+    + + +  +   +  +  +        
Sbjct: 579 ESLQTLEGHSSLVYSVAFSPDGTKVASGSE---DKTIRLWDAMTGESLQTLEGHSHWVNS 635

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
             +SP G  +A          I +      +    +E   S + +  +SP G  + 
Sbjct: 636 VAFSPDGTKVASGSEDNT---IRLWDAMTGESLQTLEGHSSWVSSVAFSPDGTKVA 688


>gi|299137747|ref|ZP_07030928.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
 gi|298600388|gb|EFI56545.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX8]
          Length = 756

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 98/294 (33%), Gaps = 42/294 (14%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y+ + G   D  S    +S S  +            DG + R +             SP+
Sbjct: 286 YRLLFGVPWDSASPFTVLSASGGA---------SHIDGLSGRTI-----------AVSPD 325

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           ++ +A          R  L+  +   + + +    ++   P +S +GK   ++    +  
Sbjct: 326 EKTLAVIK------GRQLLLADQAGGSLRTLAMLPNVAYWPEWSPDGKHIRLTTWAGDYR 379

Query: 283 D-IYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQ------ 332
             ++ +++ + +   L        +    S+S D    ++  D   +  L++        
Sbjct: 380 QSLWDINVANGSLTPLLVGSPHEHTVCCGSWSSDGKYFIYVVDEGYRSSLWIRDERPNIK 439

Query: 333 -SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                 ++ +       +  P+ S     +           I + + +G   + L ED +
Sbjct: 440 LLIKETEQELVSGPVDFWNAPIISHDNKRLYAIGHEARGELIRLSRGEGGSVQSLPEDLS 499

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
               T+S  G  + ++    G     L+    +G ++  ++ P      PQW  
Sbjct: 500 ADTVTFSRDGHWIAYTLFPGG----SLWRSRPDGSDKLQLSRPGRMTRAPQWSP 549



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 88/246 (35%), Gaps = 25/246 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           SL     DG++ +       ++   P++SP+   + Y      +  ++            
Sbjct: 521 SLWRSRPDGSD-KLQLSRPGRMTRAPQWSPDSTNLVYQCAIPGETWQICEASVDGLSVSN 579

Query: 252 RIGNFRSMILAPRFSSNGKRALIS------VQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                ++  +A  FS +G +           Q    + I   DL+S   E+L+ +  +  
Sbjct: 580 LTTAAQASGIA-TFSPHGDKVAYGQDVERGFQSQGDIFITIRDLKSGQQEKLSGSEGL-S 637

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A +SPD   +   +   G + L ++        +++   + S  D +WSP    + F  
Sbjct: 638 NARWSPDGRYMAATA--AGTQALMLLDFQTGHWSKLT---DQSVNDLIWSPDSKTVFFDT 692

Query: 366 FSGEKFAIGVMKKDGSQERLLVED---SNLQAPTW----SPSGRSLIFSRKKDGDTGSKL 418
             G    I        +     +         P W    +P G  ++   ++ G   S++
Sbjct: 693 RQGADNGIFAAYPSTGKVEKYFDAKKLRRTGFPPWRLSVTPDGAPVVL--QQAGT--SEV 748

Query: 419 YSIDLN 424
           Y  D++
Sbjct: 749 YRFDID 754



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 20/250 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + L          P  S + +++ YA   +     + L             +  +  + 
Sbjct: 446 EQELVSGPVDFWNAPIISHDNKRL-YAIGHEARGELIRLSRGEGGSVQSLPEDLSADTV- 503

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESD 321
             FS +G     ++    +  ++      +   +L+    +  +  +SPDS+ +V+  + 
Sbjct: 504 -TFSRDGHWIAYTLFPGGS--LWRSRPDGSDKLQLSRPGRMTRAPQWSPDSTNLVYQCAI 560

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGV 375
                Q+     +G     ++   +AS     +SP GD +A+ +     F       I +
Sbjct: 561 PGETWQICEASVDGLSVSNLTTAAQASGIA-TFSPHGDKVAYGQDVERGFQSQGDIFITI 619

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTP 434
                 Q+  L     L    WSP GR +  +          L  +D   G    L +  
Sbjct: 620 RDLKSGQQEKLSGSEGLSNARWSPDGRYMAATA----AGTQALMLLDFQTGHWSKLTDQ- 674

Query: 435 AYASDPQWVG 444
              +D  W  
Sbjct: 675 -SVNDLIWSP 683



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/166 (12%), Positives = 58/166 (34%), Gaps = 14/166 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            ++ +  +       +  + +  RD  + +    S  + L   R+SP+ + +A      +
Sbjct: 597 DKVAYGQDVERGFQSQGDIFITIRDLKSGQQEKLSGSEGLSNARWSPDGRYMAATAAGTQ 656

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA- 293
            ++ +        +   +  N         +S + K      ++     I++    +   
Sbjct: 657 ALMLLDFQTGHWSKLTDQSVNDL------IWSPDSKTVFFDTRQGADNGIFAAYPSTGKV 710

Query: 294 -----TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                 ++L  T F     S +PD + +V +  + G  ++Y    +
Sbjct: 711 EKYFDAKKLRRTGFPPWRLSVTPDGAPVVLQ--QAGTSEVYRFDID 754


>gi|170111346|ref|XP_001886877.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164638235|gb|EDR02514.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1146

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 102/270 (37%), Gaps = 22/270 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + +VSG    S+ V D    +   +      ++    FSP+ +K+   + D      V++
Sbjct: 866  KQIVSGSDDKSVWVWDASTGDKLKVLKGHTHLVRSVAFSPDGKKIVSGSDDK----SVWV 921

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNT 300
             D       K +     ++ +  FS +GK+ + S   D+++ ++  D  +    + L   
Sbjct: 922  WDASTGDKLKVLKGHTHLVKSVAFSPDGKKIV-SGSDDKSVWVW--DASTGDKLKVLKGH 978

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              +  S ++SPD  QIV  S     + ++V  ++  D+ ++ +          +SP G+ 
Sbjct: 979  THLVKSVAFSPDGIQIVSGSY---NKSVWVWDASTGDELKVLKGHTDWITSVAFSPDGNQ 1035

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--W--SPSGRS-LIFSRKKDGDTG 415
            I           + V           + DSN       W  SP G+  L+F   +     
Sbjct: 1036 IVSGSNDNS---VRVWDFGSLYIHETISDSNHHENHTGWLLSPDGQHRLMFVSPEFMHAA 1092

Query: 416  SKLYSIDLNGRNETLINTPAYA---SDPQW 442
            S  ++ +   R        A +     P+W
Sbjct: 1093 SASHTANATRRQRPRQAQGAPSTSTPQPRW 1122



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 110/307 (35%), Gaps = 57/307 (18%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           +   + +++    G F+   + VS S    VSG+   S+ V D    +   +      ++
Sbjct: 609 VCGSMLRTVHDWVGSFSVTAVAVSPSGKQIVSGLEDKSVRVWDASMGDELKVLKGHTDLV 668

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               FSP+ +++   + D+     V + D       K +      +++  FS +GK+ + 
Sbjct: 669 RSIAFSPDGKQIVSGSNDE----SVRVWDASTGDKLKVLKGHTDSVISVAFSPDGKQIV- 723

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--------DREGKE 326
           S   D ++ ++      +  + L     +  S ++SPDS QIV  S        D    +
Sbjct: 724 SGSNDRSVRVWGAS-TGDELKVLEGHTNLVRSVAFSPDSKQIVSGSYDESVRVWDASTGD 782

Query: 327 QL--------------------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +L                     V  ++  D+ ++ +          +SP G  I     
Sbjct: 783 KLKVLKGHTVGEIVSGLEDKSVRVWDASMGDELKVLKGHTDLVTSVAFSPDGKQIVSGS- 841

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-N 424
                       D    ++L   +++ ++  +SP G+ ++      G     ++  D   
Sbjct: 842 ------------DDKSLKVLKGHTHMVRSVAFSPDGKQIV-----SGSDDKSVWVWDAST 884

Query: 425 GRNETLI 431
           G    ++
Sbjct: 885 GDKLKVL 891


>gi|162456674|ref|YP_001619041.1| WD repeat-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161167256|emb|CAN98561.1| WD-repeat protein [Sorangium cellulosum 'So ce 56']
          Length = 1759

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 66/377 (17%), Positives = 131/377 (34%), Gaps = 49/377 (12%)

Query: 80   NLISQDSFKQKITN------PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            +L+++ +   + +       P S      WN  G  +L TG     G   +    RLWDV
Sbjct: 1084 SLVAEGAAPPRPSGADLMWIPASSCNAVAWNPSG-DLLATGH----GDGSV----RLWDV 1134

Query: 134  KDRKQIIGKKFFSSP-------ASWRKIAHTISDDIYQSITGEKG----DFNSRILFVSE 182
               + I G      P          R +A    D        E G     F+   + V  
Sbjct: 1135 VSGRAIRGIAGHLGPVNSVAFSPDGRTLASGSDDSSVMLWKVESGRVLRVFDGHGVGVRS 1194

Query: 183  SVVSGIIK-------NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
             V S   +        ++ +   +  ++  +       +    FSP+ + +A A+ D   
Sbjct: 1195 VVFSPDGRTLASGAGRAMRLWKVESGHVLRVFEGHGNWVNSVVFSPDGRTLASASDDM-- 1252

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
               V L +    RA +       M+ +  F  +G+    S  +D  + ++ V+       
Sbjct: 1253 --TVRLWEVESGRALRVFEGHGLMVTSVAFRPDGRTLA-SGSRDMTVRLWEVE-SGQVLR 1308

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             +        S  +SPD   +   S+      + + + +     R+ +          +S
Sbjct: 1309 VIEGHGARVNSVVFSPDGLTLASGSN---DTSVRLWEVDSGQVLRVFESHGHDVMSVAFS 1365

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            P G  +A  + +     +  ++  G   R L      + +  +SP GR+L        DT
Sbjct: 1366 PDGRTLAL-EPNDTTVRLWEVE-SGRVLRTLGGHGKAVTSVAFSPGGRTLASGSH---DT 1420

Query: 415  GSKLYSIDLNGRNETLI 431
              +L+ ++ +GR   ++
Sbjct: 1421 NVRLWEVE-SGRALRVL 1436



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 56/354 (15%), Positives = 127/354 (35%), Gaps = 42/354 (11%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQI---IGKKFFSSPASWRKIAHTISDDI-------- 162
            GR +    D + V  RLW+V+  + +    G     +  ++R    T++           
Sbjct: 1242 GRTLASASDDMTV--RLWEVESGRALRVFEGHGLMVTSVAFRPDGRTLASGSRDMTVRLW 1299

Query: 163  ------YQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                     +    G   + ++F  +  ++ SG    S+ + + D   +  +  S    +
Sbjct: 1300 EVESGQVLRVIEGHGARVNSVVFSPDGLTLASGSNDTSVRLWEVDSGQVLRVFESHGHDV 1359

Query: 215  FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
                FSP+ + +A     + +   V L +    R  + +G     + +  FS  G+    
Sbjct: 1360 MSVAFSPDGRTLAL----EPNDTTVRLWEVESGRVLRTLGGHGKAVTSVAFSPGGRTLA- 1414

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            S   D  + ++ V+    A   L +     +S ++SPD   +   S       + + +  
Sbjct: 1415 SGSHDTNVRLWEVE-SGRALRVLESHSHHVMSVAFSPDGRTLASGSH---DTTVRLWEVE 1470

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQ 393
                         +    V+SP G ++A +  +     +  ++  G   R+         
Sbjct: 1471 SGRALSTLGGHVKAVTSVVFSPDGRMLA-SGSNDTTVRLWEVE-SGRALRVFEGHGKAAT 1528

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN------GRNETLINTPAYASDPQ 441
            +  +SP GR+L        DT  +L+ ++        G +  ++ +  ++ D +
Sbjct: 1529 SVVFSPDGRTLA---SGSNDTTVRLWEVESGRVLRTFGGHGKVVTSVVFSPDGR 1579



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 104/321 (32%), Gaps = 36/321 (11%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSP-------ASWRKIAHTISDDIYQ-------- 164
                     RLW+V   + +   +               R +A   +D   +        
Sbjct: 1330 ASGSNDTSVRLWEVDSGQVLRVFESHGHDVMSVAFSPDGRTLALEPNDTTVRLWEVESGR 1389

Query: 165  --SITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
                 G  G   + + F     ++ SG    ++ + + +      +  S    +    FS
Sbjct: 1390 VLRTLGGHGKAVTSVAFSPGGRTLASGSHDTNVRLWEVESGRALRVLESHSHHVMSVAFS 1449

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+ + +A  ++D      V L +    RA   +G     + +  FS +G+    S   D 
Sbjct: 1450 PDGRTLASGSHDT----TVRLWEVESGRALSTLGGHVKAVTSVVFSPDGRMLA-SGSNDT 1504

Query: 281  AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             + ++ V+    A            S  +SPD   +   S+      + + +       R
Sbjct: 1505 TVRLWEVE-SGRALRVFEGHGKAATSVVFSPDGRTLASGSN---DTTVRLWEVESGRVLR 1560

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWS 398
                        V+SP G  +A          + + + +  +  L+ ED      +  +S
Sbjct: 1561 TFGGHGKVVTSVVFSPDGRTLASGSNDTT---VRLWEVESGRALLVFEDHGKGATSVAFS 1617

Query: 399  PSGRSLIFSRKKDGDTGSKLY 419
            P GR+L        DT  +L+
Sbjct: 1618 PDGRTLASGSY---DTMVRLW 1635



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 89/238 (37%), Gaps = 25/238 (10%)

Query: 190  KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              ++ + + +   +        + +    FSP  + +A  ++D      V L +    RA
Sbjct: 1377 DTTVRLWEVESGRVLRTLGGHGKAVTSVAFSPGGRTLASGSHDT----NVRLWEVESGRA 1432

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             + + +    +++  FS +G+    S   D  + ++ V+    A   L   +    S  +
Sbjct: 1433 LRVLESHSHHVMSVAFSPDGRTLA-SGSHDTTVRLWEVE-SGRALSTLGGHVKAVTSVVF 1490

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            SPD   +   S+      + + +       R+ +    +    V+SP G  +A +  +  
Sbjct: 1491 SPDGRMLASGSN---DTTVRLWEVESGRALRVFEGHGKAATSVVFSPDGRTLA-SGSNDT 1546

Query: 370  KFAIG------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +       V++  G   +++       +  +SP GR+L        DT  +L+ +
Sbjct: 1547 TVRLWEVESGRVLRTFGGHGKVVT------SVVFSPDGRTLA---SGSNDTTVRLWEV 1595



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/321 (16%), Positives = 103/321 (32%), Gaps = 41/321 (12%)

Query: 129  RLWDVKDRKQI-----IGKKFFSSP--ASWRKIAHTISDDIYQSITGEKG-------DFN 174
            RLW+V+  + +      GK   S       R +A    D   +    E G         +
Sbjct: 1381 RLWEVESGRVLRTLGGHGKAVTSVAFSPGGRTLASGSHDTNVRLWEVESGRALRVLESHS 1440

Query: 175  SRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
              ++ V+ S       SG    ++ + + +            + +    FSP+ + +A  
Sbjct: 1441 HHVMSVAFSPDGRTLASGSHDTTVRLWEVESGRALSTLGGHVKAVTSVVFSPDGRMLASG 1500

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            + D      V L +    RA +          +  FS +G+    S   D  + ++ V+ 
Sbjct: 1501 SNDT----TVRLWEVESGRALRVFEGHGKAATSVVFSPDGRTLA-SGSNDTTVRLWEVE- 1554

Query: 290  QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                         +  S  +SPD   +   S+      + + +        + +D     
Sbjct: 1555 SGRVLRTFGGHGKVVTSVVFSPDGRTLASGSN---DTTVRLWEVESGRALLVFEDHGKGA 1611

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI 405
                +SP G  +A        +   V   +    R L       AP    ++SP G  L 
Sbjct: 1612 TSVAFSPDGRTLA-----SGSYDTMVRLWEAGSGRFLGALRGHTAPVVSVSFSPDGTLLA 1666

Query: 406  FSRKKDGDTGSKLYSIDLNGR 426
             +     D   +L+ +   GR
Sbjct: 1667 SASS---DGTLRLWRV-ATGR 1683



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 96/306 (31%), Gaps = 31/306 (10%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS-------PASWRKIAHTISDDIYQSITGE 169
                        RLW+V+  + +   +  S            R +A    D   +    E
Sbjct: 1411 RTLASGSHDTNVRLWEVESGRALRVLESHSHHVMSVAFSPDGRTLASGSHDTTVRLWEVE 1470

Query: 170  KGDFN----------SRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
             G             + ++F  +     SG    ++ + + +      +     +     
Sbjct: 1471 SGRALSTLGGHVKAVTSVVFSPDGRMLASGSNDTTVRLWEVESGRALRVFEGHGKAATSV 1530

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ + +A  + D      V L +    R  +  G    ++ +  FS +G+    S  
Sbjct: 1531 VFSPDGRTLASGSNDT----TVRLWEVESGRVLRTFGGHGKVVTSVVFSPDGRTLA-SGS 1585

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D  + ++ V+    A     +      S ++SPD   +   S       + + ++    
Sbjct: 1586 NDTTVRLWEVE-SGRALLVFEDHGKGATSVAFSPDGRTLASGSY---DTMVRLWEAGSGR 1641

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 +   A      +SP G L+A     G    + + +    +   ++         +
Sbjct: 1642 FLGALRGHTAPVVSVSFSPDGTLLASASSDGT---LRLWRVATGRCLAILLPCAEGWAAF 1698

Query: 398  SPSGRS 403
            +P GR 
Sbjct: 1699 TPDGRY 1704



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 92/239 (38%), Gaps = 24/239 (10%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            GA++ ++  S    +    ++P+   +A    D      V L D    RA + I      
Sbjct: 1097 GADLMWIPASSCNAV---AWNPSGDLLATGHGDG----SVRLWDVVSGRAIRGIAGHLGP 1149

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF 318
            + +  FS +G+    S   D ++ ++ V  +S    R+ +   + + S  +SPD   +  
Sbjct: 1150 VNSVAFSPDGRTLA-SGSDDSSVMLWKV--ESGRVLRVFDGHGVGVRSVVFSPDGRTLA- 1205

Query: 319  ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             S      +L+ +        R+ +         V+SP G  +A      +   + + + 
Sbjct: 1206 -SGAGRAMRLWKV--ESGHVLRVFEGHGNWVNSVVFSPDGRTLASAS---DDMTVRLWEV 1259

Query: 379  DGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +  +   + E   L   +  + P GR+L    +   D   +L+ ++ +G+   +I    
Sbjct: 1260 ESGRALRVFEGHGLMVTSVAFRPDGRTLASGSR---DMTVRLWEVE-SGQVLRVIEGHG 1314



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 34/250 (13%)

Query: 101  QDWNSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPA----- 149
            +  ++LG  V     V+     R+          RLW+V+  + +   +     A     
Sbjct: 1473 RALSTLGGHVKAVTSVVFSPDGRMLASGSNDTTVRLWEVESGRALRVFEGHGKAATSVVF 1532

Query: 150  --SWRKIAHTISDDIYQ----------SITGEKGDFNSRILFVS--ESVVSGIIKNSLCV 195
                R +A   +D   +             G  G   + ++F     ++ SG    ++ +
Sbjct: 1533 SPDGRTLASGSNDTTVRLWEVESGRVLRTFGGHGKVVTSVVFSPDGRTLASGSNDTTVRL 1592

Query: 196  MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
             + +      +     +      FSP+ + +A  +YD      V L +    R    +  
Sbjct: 1593 WEVESGRALLVFEDHGKGATSVAFSPDGRTLASGSYDT----MVRLWEAGSGRFLGALRG 1648

Query: 256  FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
              + +++  FS +G     S   D  + ++ V         L         A+++PD   
Sbjct: 1649 HTAPVVSVSFSPDGTLLA-SASSDGTLRLWRV-ATGRCLAIL--LPCAEGWAAFTPDGRY 1704

Query: 316  IVFESDREGK 325
              F  D  G 
Sbjct: 1705 R-FGGDIAGS 1713


>gi|311899584|dbj|BAJ31992.1| hypothetical protein KSE_62270 [Kitasatospora setae KM-6054]
          Length = 1389

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 74/239 (30%), Gaps = 14/239 (5%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                R   +F   FSP+ + +A             L D    R    +  F   + +  F
Sbjct: 817  TLTDRSGPVFSVAFSPDGRTLA-----TGGEGAALLWDVATGRTTATLAGFTGAVFSLAF 871

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S +G+    +   D  + ++        T  LT       S ++SPD S +   +  +G 
Sbjct: 872  SPDGRTLA-TGGWDRTVRLWD-PATGRTTATLTGHTANVASLAFSPDGSTLA-TASEDGT 928

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             +L+              +         +SP G  +A T        +  +    +   L
Sbjct: 929  ARLW--DVATGRTTATFTNSSGPVGAVAFSPDGRTLA-TGGGEGAALLWEVATGRTIATL 985

Query: 386  LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                  + +  +SP GR+L        D   +L+ +       TL       +   +  
Sbjct: 986  TGHTGAVFSLAFSPDGRTLA---TGGWDHSVRLWDVAAGRTTATLAGHTGTVASVAFSP 1041



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/349 (13%), Positives = 104/349 (29%), Gaps = 39/349 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        RLWDV   +        +       +A        +++     D   R
Sbjct: 1002 RTLATGGWDHSVRLWDVAAGRTTATLAGHTGT-----VASVAFSPDGRTLATGSWDKTVR 1056

Query: 177  ILFVSESVVSGIIKNSLCV----MDRDGANIRYLTP-----------------SRDQILF 215
            +   + S  + +  ++  +       DG  +  +                   +    L 
Sbjct: 1057 LWDPAPSPTTTLAGHTTTLASVAFSPDGRTLATVGDTTALLWDVATGRTTANLTGHSALE 1116

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               FSP+ + +A +  D        L D    R    +      +++  FS +G+    +
Sbjct: 1117 TVAFSPDGRTLATSGEDG----TALLWDVAAGRTTATLTGHTIAVVSVAFSPDGRTLA-T 1171

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               D+   ++ V   +   + L       +S ++SPD   +      +   +L+      
Sbjct: 1172 GGGDDTARLWDV-ATARTIDTLDGHTDTVVSVAFSPDGRTLA-TGSADSTARLW--DVAT 1227

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                   +    S     +SP G  +A T  +     +  +    +   L      + + 
Sbjct: 1228 GRTTATFRGHAGSVGAVAFSPDGRTLA-TGSADSTALLWDVAAGRTTATLTGHTGPVVSV 1286

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             +SP GR+L        D+ ++L+ +       TL       S   +  
Sbjct: 1287 AFSPDGRTLA---TGSADSTARLWDVATGRSIATLTGHTGNVSSVAFSP 1332



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/320 (16%), Positives = 108/320 (33%), Gaps = 47/320 (14%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWDV   +         + +S    A   S D                     ++ +G 
Sbjct: 930  RLWDVATGRT----TATFTNSSGPVGAVAFSPD-------------------GRTLATGG 966

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + +  + +                +F   FSP+ + +A   +D      V L D    R
Sbjct: 967  GEGAALLWEVATGRTIATLTGHTGAVFSLAFSPDGRTLATGGWDH----SVRLWDVAAGR 1022

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                +      + +  FS +G+    +   D+ + ++  D   + T  L        S +
Sbjct: 1023 TTATLAGHTGTVASVAFSPDGRTLA-TGSWDKTVRLW--DPAPSPTTTLAGHTTTLASVA 1079

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPD   +    D      L    + G     ++    ++     +SP G  +A T    
Sbjct: 1080 FSPDGRTLATVGD---TTALLWDVATGRTTANLT--GHSALETVAFSPDGRTLA-TSGED 1133

Query: 369  EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI------- 421
                +  +    +   L      + +  +SP GR+L       GD  ++L+ +       
Sbjct: 1134 GTALLWDVAAGRTTATLTGHTIAVVSVAFSPDGRTLA---TGGGDDTARLWDVATARTID 1190

Query: 422  DLNGRNETLINTPAYASDPQ 441
             L+G  +T+++  A++ D +
Sbjct: 1191 TLDGHTDTVVSV-AFSPDGR 1209



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 70/228 (30%), Gaps = 15/228 (6%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + D                +    FSP+ + +A             L D    R    + 
Sbjct: 1138 LWDVAAGRTTATLTGHTIAVVSVAFSPDGRTLA----TGGGDDTARLWDVATARTIDTLD 1193

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDS 313
                 +++  FS +G+    +   D    ++  D+ +  T         ++ A ++SPD 
Sbjct: 1194 GHTDTVVSVAFSPDGRTLA-TGSADSTARLW--DVATGRTTATFRGHAGSVGAVAFSPDG 1250

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
              +   S         +                       +SP G  +A T  +     +
Sbjct: 1251 RTLATGS---ADSTALLWDVAAGRTTATLTGHTGPVVSVAFSPDGRTLA-TGSADSTARL 1306

Query: 374  GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +    S   L     N+ +  +SP GR+L        D+ ++L+ I
Sbjct: 1307 WDVATGRSIATLTGHTGNVSSVAFSPDGRTLATGSI---DSTARLWPI 1351



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 68/251 (27%), Gaps = 32/251 (12%)

Query: 130  LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            LWDV   +                  HTI+  +        G           ++ +G  
Sbjct: 1138 LWDVAAGRTTATLT-----------GHTIA--VVSVAFSPDG----------RTLATGGG 1174

Query: 190  KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             ++  + D   A            +    FSP+ + +A  + D        L D    R 
Sbjct: 1175 DDTARLWDVATARTIDTLDGHTDTVVSVAFSPDGRTLATGSADS----TARLWDVATGRT 1230

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
                      + A  FS +G+    +   D    ++ V      T  LT      +S ++
Sbjct: 1231 TATFRGHAGSVGAVAFSPDGRTLA-TGSADSTALLWDV-AAGRTTATLTGHTGPVVSVAF 1288

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            SPD   +      +   +L+                  +     +SP G  +A       
Sbjct: 1289 SPDGRTLA-TGSADSTARLW--DVATGRSIATLTGHTGNVSSVAFSPDGRTLATGSIDST 1345

Query: 370  KFAIGVMKKDG 380
                 +     
Sbjct: 1346 ARLWPITDPST 1356



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 52/183 (28%), Gaps = 32/183 (17%)

Query: 109  QVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
              +V+     +G            RLWDV   +      F     S   +A   S D   
Sbjct: 1197 DTVVSVAFSPDGRTLATGSADSTARLWDVATGRTTA--TFRGHAGSVGAVA--FSPD--- 1249

Query: 165  SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                              ++ +G   ++  + D                +    FSP+ +
Sbjct: 1250 ----------------GRTLATGSADSTALLWDVAAGRTTATLTGHTGPVVSVAFSPDGR 1293

Query: 225  KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
             +A  + D        L D    R+   +      + +  FS +G+    +   D    +
Sbjct: 1294 TLATGSADS----TARLWDVATGRSIATLTGHTGNVSSVAFSPDGRTLA-TGSIDSTARL 1348

Query: 285  YSV 287
            + +
Sbjct: 1349 WPI 1351


>gi|281410819|gb|ADA68822.1| HNWD1 [Podospora anserina]
 gi|281410821|gb|ADA68823.1| HNWD1 [Podospora anserina]
          Length = 504

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 89/270 (32%), Gaps = 25/270 (9%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG    ++ + D    +           +    FSP+ + VA  + D      + + D
Sbjct: 20  VASGSRDKTIKIWDAATGSCTQTLAGHRNWVKSVAFSPDSKWVASGSDDS----TIKIWD 75

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
                  + +      + +  FS + K    S   D  + I+  D  + +  + L     
Sbjct: 76  AATGSYTQTLEGHGGSVNSVAFSPDSKWVA-SGSSDSTIKIW--DAATGSYTQTLEGHSG 132

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++SPDS  +   S   G + + +  +      +  +    S     +SP    +A
Sbjct: 133 SVNSVAFSPDSKWVASGS---GDDTIKIWDAATGLCTQTLEGHRYSVMSVAFSPDSKWVA 189

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYS 420
              +      I +           +        +  +SP  + +        D+  K++ 
Sbjct: 190 SGSYDKT---IKIWDAATGSCTQTLAGHRNWVKSVAFSPDSKWVASGSD---DSTIKIWD 243

Query: 421 IDLNGRNETL------INTPAYASDPQWVG 444
                  +TL      +N+ A++ D +WV 
Sbjct: 244 AATGSYTQTLEGHGGSVNSVAFSPDSKWVA 273



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 87/270 (32%), Gaps = 25/270 (9%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG   +++ + D    +           +    FSP+ + VA  + D      + + D
Sbjct: 230 VASGSDDSTIKIWDAATGSYTQTLEGHGGSVNSVAFSPDSKWVASGSSDS----TIKIWD 285

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
                  + +      + +  FS + K    S   D+ + I+  D  +    + L    +
Sbjct: 286 AATGSYTQTLEGHGGSVNSVAFSPDSKWVA-SGSGDDTIKIW--DAATGLCTQTLEGHRY 342

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             +S ++SPDS  +   S     + + +  +      +       S     +SP    + 
Sbjct: 343 SVMSVAFSPDSKWVASGSY---DKTIKIWDAATGSCTQTLAGHGDSVMSVAFSPDSKGVT 399

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYS 420
                     I +           ++       +  +SP  + +    +   D   K++ 
Sbjct: 400 SGSNDKT---IKIWDAATGSCTQTLKGHRDFVLSVAFSPDSKWIASGSR---DKTIKIWD 453

Query: 421 IDLNGRNETL------INTPAYASDPQWVG 444
                  +T       I + A++ D +WV 
Sbjct: 454 AATGSCTQTFKGHRHWIMSVAFSPDSKWVA 483


>gi|170102851|ref|XP_001882641.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642538|gb|EDR06794.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1349

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 61/327 (18%), Positives = 112/327 (34%), Gaps = 46/327 (14%)

Query: 113  TGRVIKEGKDRLRVE------FRLWDVKDRKQII---------GKKFFSSPASWRKIAHT 157
               V      R  V        R+WD +  + ++               SP   R I   
Sbjct: 946  VTSVAFSPDGRHIVSGSRDKTVRVWDAQTGQSVMDPLKGHDSWVTSVAFSPDG-RHIVSG 1004

Query: 158  ISDDIYQSITGEKG-----------DFNSRILFVSESV--VSGIIKNSLCVMD-RDGANI 203
             SD   +    + G           D+ + + F  +    VSG    ++ V D + G ++
Sbjct: 1005 SSDKTVRVWDAQTGQSVMDPLKGHDDWVTSVAFSPDGRHIVSGSRDKTVRVWDAQTGQSV 1064

Query: 204  RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                   D  +    FSP+ + +   + D    +RV+   T         G     + + 
Sbjct: 1065 MDPLKGHDDWVTSVAFSPDGRHIVSGSRD--KTVRVWDAQTGQSVMDPLKG-HDGYVTSV 1121

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESD 321
             FS +G+  + S   D+ + ++  D Q+  +    L        S ++SPD   IV  S 
Sbjct: 1122 AFSPDGRHIV-SGSCDKTVRVW--DAQTGQSVMDPLKGHDNWVTSVAFSPDGRHIVSGS- 1177

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            R+   +++  Q+  S    + +  +       +SP G  I           + V      
Sbjct: 1178 RDKTVRVWDAQTGQSVMDPL-KGHDHYVTSVAFSPDGRHIVSGSDDET---VRVWDAQTG 1233

Query: 382  QER---LLVEDSNLQAPTWSPSGRSLI 405
            Q     L   D  + + T+SP GR ++
Sbjct: 1234 QSVMDPLKGHDGRVTSVTFSPDGRHIV 1260



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 92/242 (38%), Gaps = 19/242 (7%)

Query: 172  DFNSRILFVSESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             + + + F  +    VSG    ++ V D + G ++       D  +    FSP+ + +  
Sbjct: 815  AWVTSVAFSPDGRHIVSGSGDKTVRVWDAQTGQSVMDPLKGHDNWVTSVAFSPDGRHIVS 874

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + D    +RV+   T         G     + +  FS +G+  + S  +D+ + ++  D
Sbjct: 875  GSRD--KTVRVWDAQTGQSVMDPLKG-HDDCVTSVAFSPDGRHIV-SGSRDKTVRVW--D 928

Query: 289  LQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
             Q+  +    L        S ++SPD   IV  S R+   +++  Q+  S    + +  +
Sbjct: 929  AQTGQSVMDPLKGHDNWVTSVAFSPDGRHIVSGS-RDKTVRVWDAQTGQSVMDPL-KGHD 986

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRS 403
            +      +SP G  I           + V      Q     L   D  + +  +SP GR 
Sbjct: 987  SWVTSVAFSPDGRHIVSGSSDKT---VRVWDAQTGQSVMDPLKGHDDWVTSVAFSPDGRH 1043

Query: 404  LI 405
            ++
Sbjct: 1044 IV 1045



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 78/211 (36%), Gaps = 16/211 (7%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G          D  +    FSP+ + +   + D    +RV+   T         G   + 
Sbjct: 803  GQRNVSSDLGHDAWVTSVAFSPDGRHIVSGSGD--KTVRVWDAQTGQSVMDPLKG-HDNW 859

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIV 317
            + +  FS +G+  + S  +D+ + ++  D Q+  +    L        S ++SPD   IV
Sbjct: 860  VTSVAFSPDGRHIV-SGSRDKTVRVW--DAQTGQSVMDPLKGHDDCVTSVAFSPDGRHIV 916

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              S R+   +++  Q+  S    + +  +       +SP G  I           + V  
Sbjct: 917  SGS-RDKTVRVWDAQTGQSVMDPL-KGHDNWVTSVAFSPDGRHIVSGSRDKT---VRVWD 971

Query: 378  KDGSQER---LLVEDSNLQAPTWSPSGRSLI 405
                Q     L   DS + +  +SP GR ++
Sbjct: 972  AQTGQSVMDPLKGHDSWVTSVAFSPDGRHIV 1002


>gi|228470535|ref|ZP_04055394.1| prolyl oligopeptidase family protein [Porphyromonas uenonis 60-3]
 gi|228307758|gb|EEK16729.1| prolyl oligopeptidase family protein [Porphyromonas uenonis 60-3]
          Length = 665

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 108/313 (34%), Gaps = 65/313 (20%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            S+     + S+ +++ DG     LT       + PR+S + +++ +    D+ +     
Sbjct: 40  PSIKDNNSRTSIYLINSDGTGRTELTAPSAGSEYTPRWSRDGKQIYFMRGTDQGMQ--LF 97

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-------------------------- 275
             T  D A +++      I+  RFS + K  L                            
Sbjct: 98  ARTLSDGAERQLTAIDGGIVDYRFSPDEKTLLYVQDIKARPVVTDVYPDLDKADARIIED 157

Query: 276 -VQKDEAMDIYSVD---LQSNATERLTNTLF-INISA--------------SYSPDSSQI 316
            + K     + ++    +   A + +T  L  +                  ++SPD + I
Sbjct: 158 LMYKHWDEWVSTMPHPFIAKVAAQPITKGLDLLEGEPYEAPMRPHNGIEDIAFSPDGNLI 217

Query: 317 VFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +                 +Y+   +  +   +S+       +PV+SP G  + +     
Sbjct: 218 AYACRKKTGLEYSLSTNSDIYLYNVSTGETTNVSEGIMGYDTNPVFSPDGRSLIWVGMER 277

Query: 369 EKFA-----IGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +      + +      Q R L  D   N+  PTWS   +++ F+  +  +  + +YS 
Sbjct: 278 DGYESDLQVLYLYDLAKKQYRPLTADFEYNIANPTWSADSKTIYFTTCR--EALTHIYSY 335

Query: 422 DL-NGRNETLINT 433
            L NG+ + + + 
Sbjct: 336 QLANGKIKQITDG 348



 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 95/291 (32%), Gaps = 64/291 (21%)

Query: 218 RFSPNQQKVAY-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             +PN ++V Y     +  D+     +YL+++      +           PR+S +GK+ 
Sbjct: 25  ALAPNGKQVVYNVSQPSIKDNNSRTSIYLINSDGTGRTELTAPSAGSEYTPRWSRDGKQI 84

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM- 331
                 D+ M +++  L   A  +LT      +   +SPD   +++  D + +  +  + 
Sbjct: 85  YFMRGTDQGMQLFARTLSDGAERQLTAIDGGIVDYRFSPDEKTLLYVQDIKARPVVTDVY 144

Query: 332 -QSNGSDQK----------------------------RISQDKEASYFDP---------- 352
              + +D +                             I++  +    +P          
Sbjct: 145 PDLDKADARIIEDLMYKHWDEWVSTMPHPFIAKVAAQPITKGLDLLEGEPYEAPMRPHNG 204

Query: 353 ----VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWS 398
                +SP G+LIA+                 I +      +   + E        P +S
Sbjct: 205 IEDIAFSPDGNLIAYACRKKTGLEYSLSTNSDIYLYNVSTGETTNVSEGIMGYDTNPVFS 264

Query: 399 PSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTP--AYASDPQWVG 444
           P GRSLI+   +     S    LY  DL  +    +        ++P W  
Sbjct: 265 PDGRSLIWVGMERDGYESDLQVLYLYDLAKKQYRPLTADFEYNIANPTWSA 315



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 69/183 (37%), Gaps = 15/183 (8%)

Query: 264 RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSS 314
            FS +G     + +K            DIY  ++ +  T  ++   +  + +  +SPD  
Sbjct: 209 AFSPDGNLIAYACRKKTGLEYSLSTNSDIYLYNVSTGETTNVSEGIMGYDTNPVFSPDGR 268

Query: 315 QIVFES-DREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +++   +R+G E     LY+        + ++ D E +  +P WS     I FT     
Sbjct: 269 SLIWVGMERDGYESDLQVLYLYDLAKKQYRPLTADFEYNIANPTWSADSKTIYFTTCREA 328

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              I   +    + + +  D       +  + + +  + ++     ++L+ ++L     T
Sbjct: 329 LTHIYSYQLANGKIKQIT-DGQYNYTGFDLNDKGVCVASRQAMTYPTELFMVNLKNGKAT 387

Query: 430 LIN 432
            + 
Sbjct: 388 ALT 390



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 54/159 (33%), Gaps = 4/159 (2%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMD 243
              + + + +        ++         P FSP+ + + +   +      D+  +YL D
Sbjct: 232 STNSDIYLYNVSTGETTNVSEGIMGYDTNPVFSPDGRSLIWVGMERDGYESDLQVLYLYD 291

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +      +F   I  P +S++ K    +  ++    IYS  L +   +++T+  + 
Sbjct: 292 LAKKQYRPLTADFEYNIANPTWSADSKTIYFTTCREALTHIYSYQLANGKIKQITDGQYN 351

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                 +     +          +L+++         ++
Sbjct: 352 YTGFDLNDKGVCVASRQAMTYPTELFMVNLKNGKATALT 390



 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 31/61 (50%), Gaps = 12/61 (19%)

Query: 398 SPSGRSLIFS----RKKDGDTGSKLYSIDLNGRNETLIN--------TPAYASDPQWVGF 445
           +P+G+ ++++      KD ++ + +Y I+ +G   T +         TP ++ D + + F
Sbjct: 27  APNGKQVVYNVSQPSIKDNNSRTSIYLINSDGTGRTELTAPSAGSEYTPRWSRDGKQIYF 86

Query: 446 M 446
           M
Sbjct: 87  M 87


>gi|255557554|ref|XP_002519807.1| conserved hypothetical protein [Ricinus communis]
 gi|223541046|gb|EEF42603.1| conserved hypothetical protein [Ricinus communis]
          Length = 711

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 61/332 (18%), Positives = 113/332 (34%), Gaps = 64/332 (19%)

Query: 133 VKDRKQIIGKKFFSSPASWRKI------AHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           V   +Q          A +R I      A      I Q    +   FN  ++   + +  
Sbjct: 293 VATIRQKSKFTDVRVEAQYRHIEVFDLTAPKQPIQITQKTRPKDDHFNPFVIDGGKRIGY 352

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQIL----------FEPRFSPNQQKVAYATYDDEDI 236
              K+ L    ++G NI+      D               P FS +  K+A+   + + +
Sbjct: 353 HRCKSDLL---KNGDNIQRHFHKLDSPHPDVGLFRTSGVFPTFSKDGSKLAFVDNEFKAV 409

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFS--SNGKRALISV----QKDEAMDIYSV-DL 289
                   R     K        I +P +S         + +       E++ I ++ ++
Sbjct: 410 WIDDSKGLRSVYETK----GPDNIFSPVWSQNPQDDTLYVCMGPPFNSGESLQICAIPNV 465

Query: 290 QSN--ATERLTNTLFINISASYSPDSSQIVFESDREGKE----QLYVMQ------SNGSD 337
            S      +LT   F N   S +PD +++VF S R+G +     LY+M+           
Sbjct: 466 ASGARQRRQLTRG-FNNAFPSTNPDGTKLVFRSTRDGGDKKYKNLYIMEDARVGEYGDGK 524

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSG--------------EKFAIGVMKK-DGSQ 382
             R++ +         WSP+G+ I F+                    FA+ ++K  D S 
Sbjct: 525 ITRLT-NGPWIDTHCQWSPRGNWIVFSSTRDKPKDAPETDNGLDPGYFAVFLVKANDSSV 583

Query: 383 ERLLVEDSNL-----QAPTWSPSGRSLIFSRK 409
              +++  +        P +SP G S+  +  
Sbjct: 584 VVRVIKSGDNIAGHVNHPFFSPDGMSIAVTSD 615



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 67/213 (31%), Gaps = 29/213 (13%)

Query: 223 QQKVAYA---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            +++ Y    +   ++   +     ++D     +G FR+  + P FS +G +       D
Sbjct: 347 GKRIGYHRCKSDLLKNGDNIQRHFHKLDSPHPDVGLFRTSGVFPTFSKDGSKLAFV---D 403

Query: 280 EAMDIYSVDLQSNATERL--TNTLFINISASYS--PDSSQIV------FESDREGKEQLY 329
                  +D  S     +  T       S  +S  P    +       F S     +   
Sbjct: 404 NEFKAVWID-DSKGLRSVYETKGPDNIFSPVWSQNPQDDTLYVCMGPPFNSGES-LQICA 461

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----AIGVMK-------K 378
           +       ++R    +  +   P  +P G  + F             + +M+        
Sbjct: 462 IPNVASGARQRRQLTRGFNNAFPSTNPDGTKLVFRSTRDGGDKKYKNLYIMEDARVGEYG 521

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           DG   RL           WSP G  ++FS  +D
Sbjct: 522 DGKITRLTNGPWIDTHCQWSPRGNWIVFSSTRD 554



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 21/158 (13%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS--PQGDLIA 362
           +  ++S D S++ F    + + +   +  +   +         + F PVWS  PQ D + 
Sbjct: 388 VFPTFSKDGSKLAFV---DNEFKAVWIDDSKGLRSVYETKGPDNIFSPVWSQNPQDDTLY 444

Query: 363 FTK----FSGEKFAIGVMK--KDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG--D 413
                   SGE   I  +     G  Q R L    N   P+ +P G  L+F   +DG   
Sbjct: 445 VCMGPPFNSGESLQICAIPNVASGARQRRQLTRGFNNAFPSTNPDGTKLVFRSTRDGGDK 504

Query: 414 TGSKLYSID-------LNGRNETLINTPAYASDPQWVG 444
               LY ++        +G+   L N P   +  QW  
Sbjct: 505 KYKNLYIMEDARVGEYGDGKITRLTNGPWIDTHCQWSP 542



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 23/146 (15%)

Query: 271 RALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--D 321
             +    KD + D       +Y  +L++  TERLT +   ++S S SP   ++   S   
Sbjct: 142 SLVYVTTKDPSEDRRQPWTVVYKTNLRTGKTERLTPSGVNDLSPSVSPSGRKVAVASFQG 201

Query: 322 REGKEQ-------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           R    +       +Y+M        R    K   +  P W    ++I F +  GE + + 
Sbjct: 202 RGWNGEIEDLQTDIYIMNIEKPPLGRTKVIKNGGW--PTWGSD-NVIFFHRKVGEFWGVF 258

Query: 375 VMKKDGSQ----ERLLVEDSNLQAPT 396
                  +     R+  +  +   P 
Sbjct: 259 RADISNGKASEILRVTPDGFDAITPA 284



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 56/183 (30%), Gaps = 48/183 (26%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDR-----DGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           ++++F S          +L +M+       G        +   I    ++SP    + ++
Sbjct: 491 TKLVFRSTRDGGDKKYKNLYIMEDARVGEYGDGKITRLTNGPWIDTHCQWSPRGNWIVFS 550

Query: 230 TYDDE-------------DILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRA 272
           +  D+                 V+L+         R+     N    +  P FS +G   
Sbjct: 551 STRDKPKDAPETDNGLDPGYFAVFLVKANDSSVVVRVIKSGDNIAGHVNHPFFSPDGMSI 610

Query: 273 LISV-----------------QKDEAMDIYSVDLQS---------NATERLTNTLFINIS 306
            ++                        D++++D+               R+T++ + N +
Sbjct: 611 AVTSDLAAVSVDPVSLPHFLHSVRPYGDVFTLDIDPDDINKNKDLKKFNRITHSRYENAT 670

Query: 307 ASY 309
            S+
Sbjct: 671 PSW 673



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 49/159 (30%), Gaps = 14/159 (8%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---------D 279
            + D      V           +R+       L+P  S +G++  ++  +         D
Sbjct: 151 PSEDRRQPWTVVYKTNLRTGKTERLTPSGVNDLSPSVSPSGRKVAVASFQGRGWNGEIED 210

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              DIY ++++     R T  +      ++  D + I F         ++    +     
Sbjct: 211 LQTDIYIMNIEKPPLGR-TKVIKNGGWPTWGSD-NVIFFHRKVGEFWGVFRADISNGKAS 268

Query: 340 ---RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              R++ D   +      S     +A  +   +   + V
Sbjct: 269 EILRVTPDGFDAITPAAISAIKVAVATIRQKSKFTDVRV 307



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 96/303 (31%), Gaps = 44/303 (14%)

Query: 176 RILFVSESVVSGIIKNSLCVMD----RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +++V+    S   +    V+     R G   R      +     P  SP+ +KVA A++
Sbjct: 142 SLVYVTTKDPSEDRRQPWTVVYKTNLRTGKTERLTPSGVN--DLSPSVSPSGRKVAVASF 199

Query: 232 DDEDI--------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
                          +Y+M+       +           P + S+        +  E   
Sbjct: 200 QGRGWNGEIEDLQTDIYIMNIEKPPLGR--TKVIKNGGWPTWGSD-NVIFFHRKVGEFWG 256

Query: 284 IYSVDLQSNATE---RLTNTLFINISA-SYSPDSSQIV-------FESDREGKEQLYVMQ 332
           ++  D+ +       R+T   F  I+  + S     +        F   R   +  ++  
Sbjct: 257 VFRADISNGKASEILRVTPDGFDAITPAAISAIKVAVATIRQKSKFTDVRVEAQYRHIEV 316

Query: 333 SNGSDQK---RISQDKE--ASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGS 381
            + +  K   +I+Q       +F+P     G  I + +       +G+       K D  
Sbjct: 317 FDLTAPKQPIQITQKTRPKDDHFNPFVIDGGKRIGYHRCKSDLLKNGDNIQRHFHKLDSP 376

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDP 440
              + +  ++   PT+S  G  L F   +       ++  D  G R+      P     P
Sbjct: 377 HPDVGLFRTSGVFPTFSKDGSKLAFVDNE----FKAVWIDDSKGLRSVYETKGPDNIFSP 432

Query: 441 QWV 443
            W 
Sbjct: 433 VWS 435


>gi|94967521|ref|YP_589569.1| peptidase S9, prolyl oligopeptidase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94549571|gb|ABF39495.1| peptidase S9, prolyl oligopeptidase [Candidatus Koribacter
           versatilis Ellin345]
          Length = 729

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 58/353 (16%), Positives = 109/353 (30%), Gaps = 93/353 (26%)

Query: 174 NSRILFVSESVVSGIIKNS--LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +++L+V  SV          L  +  +G +      S  +    PR+SP+ + +A+   
Sbjct: 44  ATQVLYVQISVNDKKDNYDTSLWTVATNGQSAPVRLTSGKR-DSSPRWSPDGKWIAFIRG 102

Query: 232 DDEDILRVYLMDTRIDRAPKR------IGNFRSMILAPRFSSNGKRALI----------- 274
             E         T++   P +      I +    +  P +S + K               
Sbjct: 103 SAEPPKEGKPPATQLALLPVKGGEAAIITDLPRSVAQPVWSPDSKHIAFLCDANSDDLAK 162

Query: 275 ------------------------------SVQKDEAMDIYSVDLQSNA-----TERLTN 299
                                          +       I+  DL + +      ++LT 
Sbjct: 163 KQKKDAGAEPEHESDVRVINRAVYRFNGQGYLDPKHHAHIWITDLPTASDAKVTPKQLTT 222

Query: 300 TLFINISASYSPDSSQIVFESDREGKE-------QLYVMQSNGSDQKRISQDKEASYFDP 352
             F    A+++PD ++I+F +DR  +         +  +   G D + I+Q K       
Sbjct: 223 GNFDEQEATFTPDGTRILFHADRNIEPYYTLPVSDILTVPVTGGDVQLINQVKLGGLLGG 282

Query: 353 VW----SPQGDLIAFTK------FSGEKFAIGVMKKD-GSQERLLVEDSNLQA------- 394
           V     SP G  IAF         S  +  +  ++   G+  + L  D +          
Sbjct: 283 VSSMVLSPDGKRIAFIGSAPEPVRSYSEPDLWTLELTPGATPKNLTADYDFDVNSGVGGD 342

Query: 395 -----------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                      P WS  G +++    K G     L   D+ G+ +    T   
Sbjct: 343 NRAPRAAGGLDPLWSHDGSTILDVVAKQGRAI--LVKFDVTGKKQPQEITRGD 393



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 93/248 (37%), Gaps = 31/248 (12%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDI-----LRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           R Q + +P+ SP+  +V Y      D        ++ + T    AP R+ + +    +PR
Sbjct: 31  RFQWIGDPQLSPDATQVLYVQISVNDKKDNYDTSLWTVATNGQSAPVRLTSGKR-DSSPR 89

Query: 265 FSSNGKRALISVQ--------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +S +GK               K  A  +  + ++      +T+         +SPDS  I
Sbjct: 90  WSPDGKWIAFIRGSAEPPKEGKPPATQLALLPVKGGEAAIITDLPRSVAQPVWSPDSKHI 149

Query: 317 VFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            F  D    +     + + G++ +  S  +  +     ++ QG L            I +
Sbjct: 150 AFLCDANSDDLAKKQKKDAGAEPEHESDVRVINRAVYRFNGQGYL-----DPKHHAHIWI 204

Query: 376 MKKDG------SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLN 424
                      + ++L   + + Q  T++P G  ++F   ++ +       S + ++ + 
Sbjct: 205 TDLPTASDAKVTPKQLTTGNFDEQEATFTPDGTRILFHADRNIEPYYTLPVSDILTVPVT 264

Query: 425 GRNETLIN 432
           G +  LIN
Sbjct: 265 GGDVQLIN 272



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 14/109 (12%)

Query: 350 FDPVWSPQGDLIAFTKFS------GEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGR 402
            DP  SP    + + + S          ++  +  +G S    L       +P WSP G+
Sbjct: 36  GDPQLSPDATQVLYVQISVNDKKDNYDTSLWTVATNGQSAPVRLTSGKRDSSPRWSPDGK 95

Query: 403 SLIFSR------KKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
            + F R      K+     ++L  + + G    +I   P   + P W  
Sbjct: 96  WIAFIRGSAEPPKEGKPPATQLALLPVKGGEAAIITDLPRSVAQPVWSP 144



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 94/325 (28%), Gaps = 83/325 (25%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA--------------------- 229
             L ++   G     +T    + + +P +SP+ + +A+                      
Sbjct: 115 TQLALLPVKGGEAAIITD-LPRSVAQPVWSPDSKHIAFLCDANSDDLAKKQKKDAGAEPE 173

Query: 230 -------------------TYDDEDILRVYLMDTRIDRA----PKRIGNFRSMILAPRFS 266
                                D +    +++ D          PK++           F+
Sbjct: 174 HESDVRVINRAVYRFNGQGYLDPKHHAHIWITDLPTASDAKVTPKQLTTGNFDEQEATFT 233

Query: 267 SNGKRALISVQKD-------EAMDIYSVDLQSNATE-----RLTNTLFINISASYSPDSS 314
            +G R L    ++          DI +V +     +     +L   L    S   SPD  
Sbjct: 234 PDGTRILFHADRNIEPYYTLPVSDILTVPVTGGDVQLINQVKLGGLLGGVSSMVLSPDGK 293

Query: 315 QIVFESD-----REGK-EQLYVMQS-NGSDQKRISQDKE----------------ASYFD 351
           +I F        R      L+ ++   G+  K ++ D +                A   D
Sbjct: 294 RIAFIGSAPEPVRSYSEPDLWTLELTPGATPKNLTADYDFDVNSGVGGDNRAPRAAGGLD 353

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPSGRSLIFSRK 409
           P+WS  G  I        +  +      G ++   +   +     +  S   +++I S  
Sbjct: 354 PLWSHDGSTILDVVAKQGRAILVKFDVTGKKQPQEITRGDQAVEQFVASEDSKTVILSVS 413

Query: 410 KDGDTGSKLYSIDLNGRNETLINTP 434
                   L+++  +G    L N  
Sbjct: 414 TP-TLLDDLFALQPDGSQRQLTNVN 437



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 65/183 (35%), Gaps = 26/183 (14%)

Query: 220 SPNQQKVAYATYDDEDI-----LRVYLMDTRIDRAPKRIG---------NFRSMILAPR- 264
           SP+ +++A+     E +       ++ ++      PK +                 APR 
Sbjct: 289 SPDGKRIAFIGSAPEPVRSYSEPDLWTLELTPGATPKNLTADYDFDVNSGVGGDNRAPRA 348

Query: 265 -------FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQI 316
                  +S +G   L  V K     +   D+      + +T           S DS  +
Sbjct: 349 AGGLDPLWSHDGSTILDVVAKQGRAILVKFDVTGKKQPQEITRGDQAVEQFVASEDSKTV 408

Query: 317 VF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +   S     + L+ +Q +GS Q++++      + +   +   + + +T F G+K    +
Sbjct: 409 ILSVSTPTLLDDLFALQPDGS-QRQLTNVNRTLFSELNLTA-PEELWYTSFDGKKIQAWI 466

Query: 376 MKK 378
            K 
Sbjct: 467 QKP 469


>gi|301309779|ref|ZP_07215718.1| prolyl oligopeptidase family protein [Bacteroides sp. 20_3]
 gi|300831353|gb|EFK61984.1| prolyl oligopeptidase family protein [Bacteroides sp. 20_3]
          Length = 703

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/308 (17%), Positives = 107/308 (34%), Gaps = 63/308 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           ++I F+     S    + L  M+ DG + + L+     I     FSP+++KV + +    
Sbjct: 119 TKIAFLCNESGS----SQLWEMNPDGTDRKRLSDYDKDIEGF-AFSPDEKKVLFISQVKT 173

Query: 232 ---------DDEDILRVYLMDTRIDRAPKRIGNFR------------------------- 257
                    D +    V + D       + +                             
Sbjct: 174 VNSTADKYPDLDKATGVIITDLMYKHWDEWVTTAPHPFVADFDGKSISNPVDVMEGELFE 233

Query: 258 ------SMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLF 302
                   I    +++   +   + +K            DIY  DL +  T  +T     
Sbjct: 234 SPMKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKG 293

Query: 303 INISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + + +YSPD   I + S +R+G    + +L VM     ++  +S+D +++     WS  
Sbjct: 294 YDTNPTYSPDGKSIAWLSMERDGYEADQNRLMVMNLETGEKTFVSKDFDSNVDSYCWSAD 353

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              I FT     +  +  +      +   + +      + +  G  LI +++     G +
Sbjct: 354 CKRIYFTGVWHGESQVYQIDLANGNKITPLTEGMYDYASVALLGDKLI-AQRHSMSMGDE 412

Query: 418 LYSIDLNG 425
           +YSIDL G
Sbjct: 413 IYSIDLTG 420



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 56/314 (17%), Positives = 110/314 (35%), Gaps = 65/314 (20%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG++ + +T +      E  +     K+A+   +        +
Sbjct: 78  YSVPENKSNREVFVMNADGSDNKQITKTG-FAENEAVWIKGGTKIAFLCNESGSSQLWEM 136

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------------DEAMDIYSVD 288
                DR  KR+ ++   I    FS + K+ L   Q              D+A  +   D
Sbjct: 137 NPDGTDR--KRLSDYDKDIEGFAFSPDEKKVLFISQVKTVNSTADKYPDLDKATGVIITD 194

Query: 289 LQSNAT-ERLTNTLF--------------INI-------SA----------SYSPDSSQI 316
           L      E +T                  +++       S           +++  S +I
Sbjct: 195 LMYKHWDEWVTTAPHPFVADFDGKSISNPVDVMEGELFESPMKPFGGIEQLAWNTTSDKI 254

Query: 317 VFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            + S +             +YV   N      I+++ +    +P +SP G  IA+     
Sbjct: 255 AYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKGYDTNPTYSPDGKSIAWLSMER 314

Query: 369 EKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +      + VM  +  ++  + +  DSN+ +  WS   + + F+    G+  S++Y I
Sbjct: 315 DGYEADQNRLMVMNLETGEKTFVSKDFDSNVDSYCWSADCKRIYFTGVWHGE--SQVYQI 372

Query: 422 DLNGRNETLINTPA 435
           DL   N+    T  
Sbjct: 373 DLANGNKITPLTEG 386



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 87/247 (35%), Gaps = 61/247 (24%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S +GK+ + +V      +     +++ ++   +  +++T T F    A +  
Sbjct: 57  GRIGGMNVSPDGKKVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTGFAENEAVWIK 116

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
             ++I F  +  G  QL+ M  +G+D+KR+S D +       +SP    + F        
Sbjct: 117 GGTKIAFLCNESGSSQLWEMNPDGTDRKRLS-DYDKDIEGFAFSPDEKKVLFISQVKTVN 175

Query: 367 -SGEKF---------------------------AIGVMKKDG---SQERLLVEDSNLQAP 395
            + +K+                              V   DG   S    ++E    ++P
Sbjct: 176 STADKYPDLDKATGVIITDLMYKHWDEWVTTAPHPFVADFDGKSISNPVDVMEGELFESP 235

Query: 396 ----------TWSPSGRSLIFSRKKDGD------TGSKLYSIDLNGRNETLIN--TPAYA 437
                      W+ +   + ++ +K         T S +Y  DLN +  T I      Y 
Sbjct: 236 MKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKGYD 295

Query: 438 SDPQWVG 444
           ++P +  
Sbjct: 296 TNPTYSP 302



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 88/274 (32%), Gaps = 61/274 (22%)

Query: 220 SPNQQKV----AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ +KV    AY +  +    R   +        K+I           +   G +    
Sbjct: 65  SPDGKKVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTGFAENEAVWIKGGTKIAFL 124

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------------- 321
             +  +  ++ ++      +RL++        ++SPD  +++F S               
Sbjct: 125 CNESGSSQLWEMNPDGTDRKRLSDYDKDIEGFAFSPDEKKVLFISQVKTVNSTADKYPDL 184

Query: 322 -------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDP---------- 352
                                     +V   +G          E   F+           
Sbjct: 185 DKATGVIITDLMYKHWDEWVTTAPHPFVADFDGKSISNPVDVMEGELFESPMKPFGGIEQ 244

Query: 353 -VWSPQGDLIAFTKF--SGEKF------AIGVMKKDGSQERLLVED--SNLQAPTWSPSG 401
             W+   D IA+T    +G+++       I V   +  Q   + E+       PT+SP G
Sbjct: 245 LAWNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKGYDTNPTYSPDG 304

Query: 402 RSLIFSR-KKDGDTGSK--LYSIDLNGRNETLIN 432
           +S+ +   ++DG    +  L  ++L    +T ++
Sbjct: 305 KSIAWLSMERDGYEADQNRLMVMNLETGEKTFVS 338



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 69/219 (31%), Gaps = 26/219 (11%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEP-----------RFSPNQQKVAYAT-------YDDED 235
            V D DG +I       +  LFE             ++    K+AY +       Y    
Sbjct: 211 FVADFDGKSISNPVDVMEGELFESPMKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYAIST 270

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEA----MDIYSVDLQ 290
              +Y+ D    +        +     P +S +GK     S+++D        +  ++L+
Sbjct: 271 NSDIYVYDLNTKQTTNITEENKGYDTNPTYSPDGKSIAWLSMERDGYEADQNRLMVMNLE 330

Query: 291 SNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +     ++     N+ +  +S D  +I F     G+ Q+Y +     ++     +    Y
Sbjct: 331 TGEKTFVSKDFDSNVDSYCWSADCKRIYFTGVWHGESQVYQIDLANGNKITPLTEGMYDY 390

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLV 387
                     LIA          I  +   G      L 
Sbjct: 391 ASVALLGD-KLIAQRHSMSMGDEIYSIDLTGDHTVTQLT 428


>gi|281410851|gb|ADA68836.1| HET-R [Podospora anserina]
          Length = 1353

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 98/311 (31%), Gaps = 35/311 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGK--------KFFSSPASWRKIAHTISDDI------ 162
             +     +    ++WD    + +               SP   R  +  + D +      
Sbjct: 959  QRLASGAVDRTVKIWDPASGQCLQTLEGHTGSVSSVAFSPDGQRFASGVVDDTVKIWDPA 1018

Query: 163  ----YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                 Q++ G +G  +S       +   SG    ++ + D                ++  
Sbjct: 1019 SGQCLQTLEGHRGSVSSVAFSPDGQRFASGAGDRTIKIWDPASGQCLQTLEGHRGWVYSV 1078

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FS + Q+ A    DD     V + D    +  + + +    + +  FS +G+R   S  
Sbjct: 1079 AFSADGQRFASGAGDD----TVKIWDPASGQCLQTLESHNGSVSSVAFSPDGQRLA-SGA 1133

Query: 278  KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D+ + I+  D  S    + L     +  S ++S D  ++       G + + +      
Sbjct: 1134 DDDTVKIW--DPASGQCLQTLEGHKGLVYSVTFSADGQRLA---SGAGDDTVKIWDPASG 1188

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
               +  +    S     +SP G   A          + +      Q    +E    ++ +
Sbjct: 1189 QCLQTLEGHRGSVHSVAFSPDGQRFASGAVDDT---VKIWDPASGQCLQTLEGHNGSVSS 1245

Query: 395  PTWSPSGRSLI 405
              +S  G+ L 
Sbjct: 1246 VAFSADGQRLA 1256



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 87/243 (35%), Gaps = 21/243 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + + SG    ++ + D             +  ++   FSP+ Q++A    DD     V +
Sbjct: 833  QRLASGAGDRTVKIWDPASGQCFQTLEGHNGSVYSVAFSPDGQRLASGAVDD----TVKI 888

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
             D    +  + +      + +  FS++G+R   S   D+ + I+  D  S    + L   
Sbjct: 889  WDPASGQCLQTLEGHNGSVYSVAFSADGQRLA-SGAGDDTVKIW--DPASGQCLQTLEGH 945

Query: 301  LFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S ++S D  ++   + DR     + +         +  +    S     +SP G 
Sbjct: 946  RGSVSSVAFSADGQRLASGAVDRT----VKIWDPASGQCLQTLEGHTGSVSSVAFSPDGQ 1001

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              A +    +   I        Q    +E    ++ +  +SP G+   F+    GD   K
Sbjct: 1002 RFA-SGVVDDTVKIW--DPASGQCLQTLEGHRGSVSSVAFSPDGQR--FASG-AGDRTIK 1055

Query: 418  LYS 420
            ++ 
Sbjct: 1056 IWD 1058



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 16/214 (7%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            V++ D           +  ++   FS + Q++A    D      V + D    +  + + 
Sbjct: 804  VVETDWNACLQTLEGHNGSVYSVAFSADGQRLASGAGDR----TVKIWDPASGQCFQTLE 859

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDS 313
                 + +  FS +G+R   S   D+ + I+  D  S    + L        S ++S D 
Sbjct: 860  GHNGSVYSVAFSPDGQRLA-SGAVDDTVKIW--DPASGQCLQTLEGHNGSVYSVAFSADG 916

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             ++       G + + +         +  +    S     +S  G  +A +        I
Sbjct: 917  QRLA---SGAGDDTVKIWDPASGQCLQTLEGHRGSVSSVAFSADGQRLA-SGAVDRTVKI 972

Query: 374  GVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
                    Q    +E    ++ +  +SP G+   
Sbjct: 973  W--DPASGQCLQTLEGHTGSVSSVAFSPDGQRFA 1004



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 85/258 (32%), Gaps = 29/258 (11%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGII-KNSLCVMDRDGANIRYLTPSRDQILFEP----- 217
           ++++  +      I       + G   +  L    RD    R+   +R  I   P     
Sbjct: 718 EALSLLRAISEGVIAIRKLEGLLGRTHQRQLTTFIRDAH--RFALSNRWIIEQAPLQAYT 775

Query: 218 ---RFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
               F+P    V   + T +   I    +++T  +   + +      + +  FS++G+R 
Sbjct: 776 SALVFAPVGSLVKKRFKTEEPSWISTKPVVETDWNACLQTLEGHNGSVYSVAFSADGQRL 835

Query: 273 LISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK--EQLY 329
             S   D  + I+  D  S    + L        S ++SPD  ++       G   + + 
Sbjct: 836 A-SGAGDRTVKIW--DPASGQCFQTLEGHNGSVYSVAFSPDGQRLA-----SGAVDDTVK 887

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +         +  +    S +   +S  G  +A          + +      Q    +E 
Sbjct: 888 IWDPASGQCLQTLEGHNGSVYSVAFSADGQRLA---SGAGDDTVKIWDPASGQCLQTLEG 944

Query: 390 --SNLQAPTWSPSGRSLI 405
              ++ +  +S  G+ L 
Sbjct: 945 HRGSVSSVAFSADGQRLA 962


>gi|281410847|gb|ADA68834.1| HET-R [Podospora anserina]
          Length = 1353

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 98/311 (31%), Gaps = 35/311 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGK--------KFFSSPASWRKIAHTISDDI------ 162
             +     +    ++WD    + +               SP   R  +  + D +      
Sbjct: 959  QRLASGAVDRTVKIWDPASGQCLQTLEGHTGSVSSVAFSPDGQRFASGVVDDTVKIWDPA 1018

Query: 163  ----YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                 Q++ G +G  +S       +   SG    ++ + D                ++  
Sbjct: 1019 SGQCLQTLEGHRGSVSSVAFSPDGQRFASGAGDRTIKIWDPASGQCLQTLEGHRGWVYSV 1078

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FS + Q+ A    DD     V + D    +  + + +    + +  FS +G+R   S  
Sbjct: 1079 AFSADGQRFASGAGDD----TVKIWDPASGQCLQTLESHNGSVSSVAFSPDGQRLA-SGA 1133

Query: 278  KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D+ + I+  D  S    + L     +  S ++S D  ++       G + + +      
Sbjct: 1134 DDDTVKIW--DPASGQCLQTLEGHKGLVYSVTFSADGQRLA---SGAGDDTVKIWDPASG 1188

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
               +  +    S     +SP G   A          + +      Q    +E    ++ +
Sbjct: 1189 QCLQTLEGHRGSVHSVAFSPDGQRFASGAVDDT---VKIWDPASGQCLQTLEGHNGSVSS 1245

Query: 395  PTWSPSGRSLI 405
              +S  G+ L 
Sbjct: 1246 VAFSADGQRLA 1256



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 87/243 (35%), Gaps = 21/243 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + + SG    ++ + D             +  ++   FSP+ Q++A    DD     V +
Sbjct: 833  QRLASGAGDRTVKIWDPASGQCFQTLEGHNGSVYSVAFSPDGQRLASGAVDD----TVKI 888

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
             D    +  + +      + +  FS++G+R   S   D+ + I+  D  S    + L   
Sbjct: 889  WDPASGQCLQTLEGHNGSVYSVAFSADGQRLA-SGAGDDTVKIW--DPASGQCLQTLEGH 945

Query: 301  LFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S ++S D  ++   + DR     + +         +  +    S     +SP G 
Sbjct: 946  RGSVSSVAFSADGQRLASGAVDRT----VKIWDPASGQCLQTLEGHTGSVSSVAFSPDGQ 1001

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              A +    +   I        Q    +E    ++ +  +SP G+   F+    GD   K
Sbjct: 1002 RFA-SGVVDDTVKIW--DPASGQCLQTLEGHRGSVSSVAFSPDGQR--FASG-AGDRTIK 1055

Query: 418  LYS 420
            ++ 
Sbjct: 1056 IWD 1058



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 16/214 (7%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            V++ D           +  ++   FS + Q++A    D      V + D    +  + + 
Sbjct: 804  VVETDWNACLQTLEGHNGSVYSVAFSADGQRLASGAGDR----TVKIWDPASGQCFQTLE 859

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDS 313
                 + +  FS +G+R   S   D+ + I+  D  S    + L        S ++S D 
Sbjct: 860  GHNGSVYSVAFSPDGQRLA-SGAVDDTVKIW--DPASGQCLQTLEGHNGSVYSVAFSADG 916

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             ++       G + + +         +  +    S     +S  G  +A +        I
Sbjct: 917  QRLA---SGAGDDTVKIWDPASGQCLQTLEGHRGSVSSVAFSADGQRLA-SGAVDRTVKI 972

Query: 374  GVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
                    Q    +E    ++ +  +SP G+   
Sbjct: 973  W--DPASGQCLQTLEGHTGSVSSVAFSPDGQRFA 1004



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 85/258 (32%), Gaps = 29/258 (11%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGII-KNSLCVMDRDGANIRYLTPSRDQILFEP----- 217
           ++++  +      I       + G   +  L    RD    R+   +R  I   P     
Sbjct: 718 EALSLLRAISEGVIAIRKLEGLLGRTHQRQLTTFIRDAH--RFALSNRWIIEQAPLQAYT 775

Query: 218 ---RFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
               F+P    V   + T +   I    +++T  +   + +      + +  FS++G+R 
Sbjct: 776 SALVFAPVGSLVKKRFKTEEPSWISTKPVVETDWNACLQTLEGHNGSVYSVAFSADGQRL 835

Query: 273 LISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK--EQLY 329
             S   D  + I+  D  S    + L        S ++SPD  ++       G   + + 
Sbjct: 836 A-SGAGDRTVKIW--DPASGQCFQTLEGHNGSVYSVAFSPDGQRLA-----SGAVDDTVK 887

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +         +  +    S +   +S  G  +A          + +      Q    +E 
Sbjct: 888 IWDPASGQCLQTLEGHNGSVYSVAFSADGQRLA---SGAGDDTVKIWDPASGQCLQTLEG 944

Query: 390 --SNLQAPTWSPSGRSLI 405
              ++ +  +S  G+ L 
Sbjct: 945 HRGSVSSVAFSADGQRLA 962


>gi|298482873|ref|ZP_07001056.1| prolyl oligopeptidase family protein [Bacteroides sp. D22]
 gi|298271073|gb|EFI12651.1| prolyl oligopeptidase family protein [Bacteroides sp. D22]
          Length = 700

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 131/390 (33%), Gaps = 78/390 (20%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDV---KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            G        +     V +  + V   K  +++       S     +I HT   +    +
Sbjct: 55  IGGFAVSPDGKKIAYTVTY--YSVPENKSNREVFVMNADGSENQ--QITHTPYQE--NEV 108

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T  KG   +++ F+S    +    + L  M+ DG+  + LT     I      SP+ +K+
Sbjct: 109 TWIKGG--TKLAFLS----NDNGSSQLYQMNPDGSGRKQLTHYDGDIEGY-SISPDGKKL 161

Query: 227 AYATY------------DDEDILRVYLMDTRIDRAPKRIG--------NFRSMILA---- 262
            + +             D      + + D       + +         +F    ++    
Sbjct: 162 LFISQVKTKESTADKYPDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVD 221

Query: 263 ------------P-------RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATE 295
                       P        +++   +   + +K            DIY  DL +  TE
Sbjct: 222 ILNGEPYESPMKPWGGIEQLAWNTASDKVAYTCRKKTGLEYAISTNSDIYIYDLNTKKTE 281

Query: 296 RLTN-TLFINISASYSPDSSQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASY 349
            +T      + +  YSPD   I ++S +R+G      +L++M     +++ +S+  E++ 
Sbjct: 282 NITEENKGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKTFESNV 341

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              VW     +I FT     +  I  +       + +           +  G  LI +++
Sbjct: 342 DAFVWGADAKVIYFTGVWHGESQIYALDLANDSVKAITSGMYDYEGV-ALFGDKLI-AKR 399

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                G ++YS+ L+G    L        D
Sbjct: 400 HSMSMGDEIYSVALDGSTTQLTQENKQIYD 429



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 92/280 (32%), Gaps = 67/280 (23%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISV------QKD 279
           T D     +V +  + I    KR+          I     S +GK+   +V      +  
Sbjct: 21  TKDAGKTDQVLIEKSDIKIEGKRMTPEALWAMGRIGGFAVSPDGKKIAYTVTYYSVPENK 80

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +++ ++   +  +++T+T +     ++    +++ F S+  G  QLY M  +GS +K
Sbjct: 81  SNREVFVMNADGSENQQITHTPYQENEVTWIKGGTKLAFLSNDNGSSQLYQMNPDGSGRK 140

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK----------------------------- 370
           +++   +        SP G  + F      K                             
Sbjct: 141 QLTHY-DGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTDLMYKHWDEW 199

Query: 371 ----FAIGVMKKDGSQERLLVEDSNLQAPTWSPS--------------GRSLIFS-RKKD 411
                   V   DG+    +V D     P  SP                  + ++ RKK 
Sbjct: 200 VTTAPHPFVADFDGNGISNIV-DILNGEPYESPMKPWGGIEQLAWNTASDKVAYTCRKKT 258

Query: 412 G-----DTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           G      T S +Y  DLN +    I      Y ++PQ+  
Sbjct: 259 GLEYAISTNSDIYIYDLNTKKTENITEENKGYDTNPQYSP 298



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 49/321 (15%), Positives = 108/321 (33%), Gaps = 69/321 (21%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG+  + +T +  Q      +     K+A+ + D+       +
Sbjct: 74  YSVPENKSNREVFVMNADGSENQQITHTPYQENEV-TWIKGGTKLAFLSNDNGSSQLYQM 132

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------------- 278
                 R  K++ ++   I     S +GK+ L   Q                        
Sbjct: 133 NPDGSGR--KQLTHYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTD 190

Query: 279 ----------DEAMDIYSVDLQSNATERLTNTLFINISA--------------SYSPDSS 314
                       A   +  D   N    + + L  N                 +++  S 
Sbjct: 191 LMYKHWDEWVTTAPHPFVADFDGNGISNIVDIL--NGEPYESPMKPWGGIEQLAWNTASD 248

Query: 315 QIVFE-SDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++ +    + G          +Y+   N    + I+++ +    +P +SP G  IA+   
Sbjct: 249 KVAYTCRKKTGLEYAISTNSDIYIYDLNTKKTENITEENKGYDTNPQYSPDGKYIAWQSM 308

Query: 367 SGEKFA-----IGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             + +      + +M  +  ++R + +   SN+ A  W    + + F+    G+  S++Y
Sbjct: 309 ERDGYEADLNRLFIMNLETGEKRFVSKTFESNVDAFVWGADAKVIYFTGVWHGE--SQIY 366

Query: 420 SIDLNGRNETLINTPAYASDP 440
           ++DL   +   I +  Y  + 
Sbjct: 367 ALDLANDSVKAITSGMYDYEG 387


>gi|222356394|gb|ACM48730.1| HET-R [Podospora anserina]
          Length = 1353

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 98/311 (31%), Gaps = 35/311 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGK--------KFFSSPASWRKIAHTISDDI------ 162
             +     +    ++WD    + +               SP   R  +  + D +      
Sbjct: 959  QRLASGAVDRTVKIWDPASGQCLQTLEGHTGSVSSVAFSPDGQRFASGVVDDTVKIWDPA 1018

Query: 163  ----YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                 Q++ G +G  +S       +   SG    ++ + D                ++  
Sbjct: 1019 SGQCLQTLEGHRGSVSSVAFSPDGQRFASGAGDRTIKIWDPASGQCLQTLEGHRGWVYSV 1078

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FS + Q+ A    DD     V + D    +  + + +    + +  FS +G+R   S  
Sbjct: 1079 AFSADGQRFASGAGDD----TVKIWDPASGQCLQTLESHNGSVSSVAFSPDGQRLA-SGA 1133

Query: 278  KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D+ + I+  D  S    + L     +  S ++S D  ++       G + + +      
Sbjct: 1134 DDDTVKIW--DPASGQCLQTLEGHKGLVYSVTFSADGQRLA---SGAGDDTVKIWDPASG 1188

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
               +  +    S     +SP G   A          + +      Q    +E    ++ +
Sbjct: 1189 QCLQTLEGHRGSVHSVAFSPDGQRFASGAVDDT---VKIWDPASGQCLQTLEGHNGSVSS 1245

Query: 395  PTWSPSGRSLI 405
              +S  G+ L 
Sbjct: 1246 VAFSADGQRLA 1256



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 87/243 (35%), Gaps = 21/243 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + + SG    ++ + D             +  ++   FSP+ Q++A    DD     V +
Sbjct: 833  QRLASGAGDRTVKIWDPASGQCFQTLEGHNGSVYSVAFSPDGQRLASGAVDD----TVKI 888

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
             D    +  + +      + +  FS++G+R   S   D+ + I+  D  S    + L   
Sbjct: 889  WDPASGQCLQTLEGHNGSVYSVAFSADGQRLA-SGAGDDTVKIW--DPASGQCLQTLEGH 945

Query: 301  LFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S ++S D  ++   + DR     + +         +  +    S     +SP G 
Sbjct: 946  RGSVSSVAFSADGQRLASGAVDRT----VKIWDPASGQCLQTLEGHTGSVSSVAFSPDGQ 1001

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              A +    +   I        Q    +E    ++ +  +SP G+   F+    GD   K
Sbjct: 1002 RFA-SGVVDDTVKIW--DPASGQCLQTLEGHRGSVSSVAFSPDGQR--FASG-AGDRTIK 1055

Query: 418  LYS 420
            ++ 
Sbjct: 1056 IWD 1058



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 16/214 (7%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            V++ D           +  ++   FS + Q++A    D      V + D    +  + + 
Sbjct: 804  VVETDWNACLQTLEGHNGSVYSVAFSADGQRLASGAGDR----TVKIWDPASGQCFQTLE 859

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDS 313
                 + +  FS +G+R   S   D+ + I+  D  S    + L        S ++S D 
Sbjct: 860  GHNGSVYSVAFSPDGQRLA-SGAVDDTVKIW--DPASGQCLQTLEGHNGSVYSVAFSADG 916

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             ++       G + + +         +  +    S     +S  G  +A +        I
Sbjct: 917  QRLA---SGAGDDTVKIWDPASGQCLQTLEGHRGSVSSVAFSADGQRLA-SGAVDRTVKI 972

Query: 374  GVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
                    Q    +E    ++ +  +SP G+   
Sbjct: 973  W--DPASGQCLQTLEGHTGSVSSVAFSPDGQRFA 1004



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 85/258 (32%), Gaps = 29/258 (11%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGII-KNSLCVMDRDGANIRYLTPSRDQILFEP----- 217
           ++++  +      I       + G   +  L    RD    R+   +R  I   P     
Sbjct: 718 EALSLLRAISEGVIAIRKLEGLLGRTHQRQLTTFIRDAH--RFALSNRWIIEQAPLQAYT 775

Query: 218 ---RFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
               F+P    V   + T +   I    +++T  +   + +      + +  FS++G+R 
Sbjct: 776 SALVFAPVGSLVKKRFKTEEPSWISTKPVVETDWNACLQTLEGHNGSVYSVAFSADGQRL 835

Query: 273 LISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK--EQLY 329
             S   D  + I+  D  S    + L        S ++SPD  ++       G   + + 
Sbjct: 836 A-SGAGDRTVKIW--DPASGQCFQTLEGHNGSVYSVAFSPDGQRLA-----SGAVDDTVK 887

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +         +  +    S +   +S  G  +A          + +      Q    +E 
Sbjct: 888 IWDPASGQCLQTLEGHNGSVYSVAFSADGQRLA---SGAGDDTVKIWDPASGQCLQTLEG 944

Query: 390 --SNLQAPTWSPSGRSLI 405
              ++ +  +S  G+ L 
Sbjct: 945 HRGSVSSVAFSADGQRLA 962


>gi|113477320|ref|YP_723381.1| WD-40 repeat-containing protein [Trichodesmium erythraeum IMS101]
 gi|110168368|gb|ABG52908.1| WD-40 repeat [Trichodesmium erythraeum IMS101]
          Length = 1553

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 60/319 (18%), Positives = 121/319 (37%), Gaps = 49/319 (15%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWD ++ K++                H   D ++       G         + +  S  
Sbjct: 1156 RLWDTENGKELATLN------------HQ--DRVWAVAFSPDGK--------TIATASLD 1193

Query: 189  IKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L     D  N   L T +    +    FSP+ + +A A+YD+       L DT+  
Sbjct: 1194 KTARLW----DTENGFELATLNHQDWVRAVAFSPDGKTIATASYDN----TARLWDTKTR 1245

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            +    + N +  ++A  FS +GK    +  +D+   ++  +        L + L IN  A
Sbjct: 1246 KELATL-NHQDWVIAVAFSPDGKTIA-TASRDKTARLWDTE-NGKVLATLNHQLDINAVA 1302

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPD   I   +  +   +L+    +  + K + + + ++  F   +SP G  IA   +
Sbjct: 1303 -FSPDGKTIA-TATSDKTARLW----DTENGKVLATLNHQSRVFAVAFSPDGKTIATASY 1356

Query: 367  SGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                    +    +G     L   S++ A  +SP G+++  +     D  ++L+  + NG
Sbjct: 1357 DKTA---RLWDTENGKVLATLNHQSSVNAVAFSPDGKTIATASY---DKTARLWDTE-NG 1409

Query: 426  RNETLINTPAYASDPQWVG 444
            +    +N  +  +   +  
Sbjct: 1410 KVLATLNHQSSVNAVAFSP 1428



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 58/305 (19%), Positives = 112/305 (36%), Gaps = 45/305 (14%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWD ++ K++                H   D +        G         + +  S  
Sbjct: 910  RLWDTENGKELATLN------------HQ--DSVRAVAFSPDGK--------TIATASND 947

Query: 189  IKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L     D  N + L T +    +    FSP+ + +A AT D        L DT   
Sbjct: 948  KTARLW----DTENGKELATLNHQDSVRAVAFSPDGKTIATATSDK----TARLWDTENG 999

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 + N +S + A  FS +GK    +   D+   ++  D ++       N  F   + 
Sbjct: 1000 NVLATL-NHQSRVRAVAFSPDGKTIA-TASYDKTARLW--DTENGKELATLNHQFWVNAV 1055

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            ++SPD   I   S     +    +    +  +  + + +   +   +SP G  IA T   
Sbjct: 1056 AFSPDGKTIATAS----SDNTARLWDTENGFELATLNHQDRVWAVAFSPDGKTIA-TASD 1110

Query: 368  GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +   +    ++G +   L   S++ A  +SP G+++  + +   D  ++L+  + NG+ 
Sbjct: 1111 DKTARLW-DTENGKELATLNHQSSVNAVAFSPDGKTIATASR---DNTARLWDTE-NGKE 1165

Query: 428  ETLIN 432
               +N
Sbjct: 1166 LATLN 1170



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 111/270 (41%), Gaps = 23/270 (8%)

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            S+   + ++   G I+  L  +     +  +    +D+++    FSP+ + +A A+YD+ 
Sbjct: 813  SQFSDIPQNAADGAIRKGLTQLP----DHLHTLNHQDRVIAV-AFSPDGKTIATASYDN- 866

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                  L DT        + N +S + A  FS +GK    +   D+   ++  D ++   
Sbjct: 867  ---TARLWDTENGNVLATL-NHQSRVRAVAFSPDGKTIA-TASSDKTARLW--DTENGKE 919

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                N      + ++SPD   I   S     ++   +    + ++  + + + S     +
Sbjct: 920  LATLNHQDSVRAVAFSPDGKTIATAS----NDKTARLWDTENGKELATLNHQDSVRAVAF 975

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            SP G  IA T  S +   +    ++G+    L   S ++A  +SP G+++  +     D 
Sbjct: 976  SPDGKTIA-TATSDKTARLW-DTENGNVLATLNHQSRVRAVAFSPDGKTIATASY---DK 1030

Query: 415  GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             ++L+  + NG+    +N   + +   +  
Sbjct: 1031 TARLWDTE-NGKELATLNHQFWVNAVAFSP 1059



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 59/312 (18%), Positives = 104/312 (33%), Gaps = 50/312 (16%)

Query: 79   FNL----ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF----RL 130
            F+     I+  S  +     D+   F+         +       +GK      +    RL
Sbjct: 1180 FSPDGKTIATASLDKTARLWDTENGFELATLNHQDWVRAVAFSPDGKTIATASYDNTARL 1239

Query: 131  WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
            WD K RK++                H   D +        G         + +  S    
Sbjct: 1240 WDTKTRKELATLN------------HQ--DWVIAVAFSPDGK--------TIATASRDKT 1277

Query: 191  NSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L     D  N + L     Q+      FSP+ + +A AT D        L DT   + 
Sbjct: 1278 ARLW----DTENGKVLATLNHQLDINAVAFSPDGKTIATATSDK----TARLWDTENGKV 1329

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
               + N +S + A  FS +GK    +   D+   ++  D ++       N      + ++
Sbjct: 1330 LATL-NHQSRVFAVAFSPDGKTIA-TASYDKTARLW--DTENGKVLATLNHQSSVNAVAF 1385

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSG 368
            SPD   I   S  +   +L+    +  + K + + + ++S     +SP G  IA T  S 
Sbjct: 1386 SPDGKTIATASY-DKTARLW----DTENGKVLATLNHQSSVNAVAFSPDGKTIA-TASSD 1439

Query: 369  EKFAIGVMKKDG 380
            +   +      G
Sbjct: 1440 KTARLHWTTPKG 1451


>gi|170744520|ref|YP_001773175.1| peptidase S41 [Methylobacterium sp. 4-46]
 gi|168198794|gb|ACA20741.1| peptidase S41 [Methylobacterium sp. 4-46]
          Length = 1125

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 76/205 (37%), Gaps = 29/205 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G R     +      I+ V     A   LT       + ++SPD   + F SDR
Sbjct: 50  PALSPDGTRIAFRHRG----QIWIVPASGGAATALTPAGTHAAAPAWSPDGRTLAFASDR 105

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------------- 369
            G   ++ + + G + +R++            +P G ++   +  G+             
Sbjct: 106 FGALNVFAVPAAGGEIRRLTWYGL-DERPMSVAPDGRVLFAARRLGDAARTFAPPNRTEM 164

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYS 420
              +  +   G +E L++ ++ L A +  P G+ L+++           +      +++ 
Sbjct: 165 ASQVYAVPLAGGRETLVLPNAALDARS-DPGGKRLLYTSPNVEQRFRQHQVSRAVRQVWL 223

Query: 421 ID-LNGRNETLINTPAYASDPQWVG 444
            D   GR+E L      + +  W+ 
Sbjct: 224 YDAATGRHERLTEGTRESRNAVWLP 248



 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 77/223 (34%), Gaps = 29/223 (13%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P+R     +   SP  Q+VA     D        +  R  ++ KRI         P FS
Sbjct: 330 VPARSSEFSDLAVSPTGQEVALVAQGD------ISVAARDGKSVKRITRGPGEARNPTFS 383

Query: 267 SNGKRALISVQKDEAMDIYSVDL----QSN-------ATERLTNTLFINISASYSPDSSQ 315
            +G+R   + ++D    +Y   L    ++           RL +     +   Y+PD  +
Sbjct: 384 PDGRRLAYAAERDGRWGLYETSLAVPEETGFAQATRLVERRLPSAEGDALVPRYAPDGRR 443

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDK-----EASYFDPVWSPQGDLIAFTKFSGEK 370
           + +  DR     ++++       + +         +   +   WSP    +A      + 
Sbjct: 444 LAYVLDRA---AVHILDLASGADREVVPPGRFYAYDDGRWWLAWSPDSRWLALPIQGEQS 500

Query: 371 F--AIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRK 409
           F   + V+  DGS+   R+           WS  G  L++   
Sbjct: 501 FATNVAVVPADGSRPPLRVAPAGEAQGDAQWSADGSFLLWRSD 543



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 81/239 (33%), Gaps = 30/239 (12%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++A    + E I             P R   F  +      S  G+   +  Q D    I
Sbjct: 306 RLARGAAEPEVIPVTVTESAFAGEVPARSSEFSDL----AVSPTGQEVALVAQGD----I 357

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
                   + +R+T       + ++SPD  ++ + ++R+G+  LY       ++   +Q 
Sbjct: 358 SVAARDGKSVKRITRGPGEARNPTFSPDGRRLAYAAERDGRWGLYETSLAVPEETGFAQA 417

Query: 345 K----------EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                      E     P ++P G  +A+     ++ A+ ++      +R +V      A
Sbjct: 418 TRLVERRLPSAEGDALVPRYAPDGRRLAYVL---DRAAVHILDLASGADREVVPPGRFYA 474

Query: 395 P-------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY--ASDPQWVG 444
                    WSP  R L    + +    + +  +  +G    L   PA     D QW  
Sbjct: 475 YDDGRWWLAWSPDSRWLALPIQGEQSFATNVAVVPADGSRPPLRVAPAGEAQGDAQWSA 533



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 82/250 (32%), Gaps = 39/250 (15%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           S    L EP  SP+  ++A+             +      A   +    +   AP +S +
Sbjct: 42  SGRLWLREPALSPDGTRIAFRHRGQ------IWIVPASGGAATALTPAGTHAAAPAWSPD 95

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---- 324
           G+    +  +  A+++++V        RLT         S +PD  +++F + R G    
Sbjct: 96  GRTLAFASDRFGALNVFAVPAAGGEIRRLTWYGLDERPMSVAPDG-RVLFAARRLGDAAR 154

Query: 325 ----------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---- 370
                       Q+Y +   G    R +     +  D    P G  + +T  + E+    
Sbjct: 155 TFAPPNRTEMASQVYAVPLAGG---RETLVLPNAALDARSDPGGKRLLYTSPNVEQRFRQ 211

Query: 371 -------FAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    + +      +   L E +   +   W P G  + +  +  G     ++ + 
Sbjct: 212 HQVSRAVRQVWLYDAATGRHERLTEGTRESRNAVWLP-GDEIAYLSEASGS--LNVWRLS 268

Query: 423 LNGRNETLIN 432
           L  R    + 
Sbjct: 269 LAERVPRQLT 278



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 57/359 (15%), Positives = 109/359 (30%), Gaps = 117/359 (32%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY--------- 228
           L    + ++   +  + ++   G     LTP+       P +SP+ + +A+         
Sbjct: 52  LSPDGTRIAFRHRGQIWIVPASGGAATALTPAGTHAA-APAWSPDGRTLAFASDRFGALN 110

Query: 229 --------------ATYDDEDILRVYLMDTRIDRAPKRIGN------------------- 255
                           Y  ++       D R+  A +R+G+                   
Sbjct: 111 VFAVPAAGGEIRRLTWYGLDERPMSVAPDGRVLFAARRLGDAARTFAPPNRTEMASQVYA 170

Query: 256 -----------FRSMILAPRFSSNGKRALISVQKDEAM-----------DIYSVDLQSNA 293
                        +  L  R    GKR L +    E              ++  D  +  
Sbjct: 171 VPLAGGRETLVLPNAALDARSDPGGKRLLYTSPNVEQRFRQHQVSRAVRQVWLYDAATGR 230

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            ERLT     + +A + P   +I + S+  G   ++ +       ++++   E +     
Sbjct: 231 HERLTEGTRESRNAVWLP-GDEIAYLSEASGSLNVWRLSLAERVPRQLTFFAEGAVRWLS 289

Query: 354 WSPQGDLI---------------------------AF---------------TKFSGE-- 369
            S +GDL+                           AF                  +G+  
Sbjct: 290 ASAEGDLVFAREGALYRLARGAAEPEVIPVTVTESAFAGEVPARSSEFSDLAVSPTGQEV 349

Query: 370 ----KFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               +  I V  +DG   + +       + PT+SP GR L ++ ++DG  G  LY   L
Sbjct: 350 ALVAQGDISVAARDGKSVKRITRGPGEARNPTFSPDGRRLAYAAERDGRWG--LYETSL 406



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 64/215 (29%), Gaps = 60/215 (27%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
               +F+   +  +   V+ + +  + V  RDG +++ +T    +    P FSP+ +++A
Sbjct: 332 ARSSEFSDLAVSPTGQEVALVAQGDISVAARDGKSVKRITRGPGE-ARNPTFSPDGRRLA 390

Query: 228 YATYDDED---------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           YA   D           +              +R+ +     L PR++ +G+R    + +
Sbjct: 391 YAAERDGRWGLYETSLAVPEETGFAQATRLVERRLPSAEGDALVPRYAPDGRRLAYVLDR 450

Query: 279 --------------------------DEAMDIY-----------------------SVDL 289
                                     D    +                         V  
Sbjct: 451 AAVHILDLASGADREVVPPGRFYAYDDGRWWLAWSPDSRWLALPIQGEQSFATNVAVVPA 510

Query: 290 QSNATE-RLTNTLFINISASYSPDSSQIVFESDRE 323
             +    R+         A +S D S +++ SD  
Sbjct: 511 DGSRPPLRVAPAGEAQGDAQWSADGSFLLWRSDAS 545


>gi|168699314|ref|ZP_02731591.1| peptidase S9, prolyl oligopeptidase active site region [Gemmata
           obscuriglobus UQM 2246]
          Length = 706

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 94/279 (33%), Gaps = 72/279 (25%)

Query: 214 LFEPRFSPNQQKVAYATYD-----DEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSS 267
           +  P+ SP+ + V Y         ++    ++L  T     PK+I + +    + PR+S 
Sbjct: 38  VASPQISPDGKAVVYQVTTVDLGANKSSTALWLAATDGKTEPKQITDPKGKKDMNPRWSP 97

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----- 322
           +G R L    +     ++ + +     + +T+      + +++PD   + F S       
Sbjct: 98  DGTRVLFESTRSGTPQLWVLTV-GEEPKPVTSISTGASNGTWAPDGKSVAFVSTVYPEFS 156

Query: 323 -----------------------------------------EGKEQLYVMQSNGSDQKRI 341
                                                    + ++ L+V   +G+D + +
Sbjct: 157 EKPFPESDKLNKEKDEEIEKSPVKAKTFTKLFYRHWDDYVGDKRQHLFVCNLDGTDTRDV 216

Query: 342 SQD---------KEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERL- 385
           +             +S  D  +SP G  + FT    +       + I  +    +  +  
Sbjct: 217 TPGDRDANPTSSTFSSGDDFTFSPDGKYLVFTAVPDKDESWSTNYDICRVSVTNTSTKWE 276

Query: 386 -LVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            L +D  +    P +SP G+ L +  +K     +  + +
Sbjct: 277 CLTKDNKAADGGPKFSPDGKKLAWRAQKQAGYEADKWDV 315



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 80/234 (34%), Gaps = 71/234 (30%)

Query: 260 ILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSN-ATERLTNTLFI-NISASYSP 311
           + +P+ S +GK  +  V   +      +  ++          +++T+     +++  +SP
Sbjct: 38  VASPQISPDGKAVVYQVTTVDLGANKSSTALWLAATDGKTEPKQITDPKGKKDMNPRWSP 97

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D ++++FES R G  QL+V+   G + K ++     +  +  W+P G  +AF      +F
Sbjct: 98  DGTRVLFESTRSGTPQLWVLTV-GEEPKPVTSISTGA-SNGTWAPDGKSVAFVSTVYPEF 155

Query: 372 ----------------------------------------------AIGVMKKDGSQERL 385
                                                          + V   DG+  R 
Sbjct: 156 SEKPFPESDKLNKEKDEEIEKSPVKAKTFTKLFYRHWDDYVGDKRQHLFVCNLDGTDTRD 215

Query: 386 LVEDSNLQAP-----------TWSPSGRSLIFSRKKDGD----TGSKLYSIDLN 424
           +        P           T+SP G+ L+F+   D D    T   +  + + 
Sbjct: 216 VTPGDRDANPTSSTFSSGDDFTFSPDGKYLVFTAVPDKDESWSTNYDICRVSVT 269



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 11/103 (10%)

Query: 351 DPVWSPQGDLIAF------TKFSGEKFAIGVMKKDG-SQERLLVE--DSNLQAPTWSPSG 401
            P  SP G  + +         +    A+ +   DG ++ + + +        P WSP G
Sbjct: 40  SPQISPDGKAVVYQVTTVDLGANKSSTALWLAATDGKTEPKQITDPKGKKDMNPRWSPDG 99

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             ++F   + G    +L+ + +    + + +    AS+  W  
Sbjct: 100 TRVLFESTRSGT--PQLWVLTVGEEPKPVTSISTGASNGTWAP 140


>gi|154310168|ref|XP_001554416.1| hypothetical protein BC1G_07004 [Botryotinia fuckeliana B05.10]
 gi|150851565|gb|EDN26758.1| hypothetical protein BC1G_07004 [Botryotinia fuckeliana B05.10]
          Length = 1103

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 95/276 (34%), Gaps = 23/276 (8%)

Query: 161 DIYQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           D +Q          + ++F   S+++ S    +++ + +      +Y        +    
Sbjct: 739 DAHQQTLEGHSGGVTAVVFSPDSKTIASASDDHTVRLWNATSGAHQYTLEGHSGGVRAVV 798

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A A+ D      V L +       K +      + A  FS + K    S   
Sbjct: 799 FSPDGKIIASASDDK----TVRLWNATTGAHQKTLEGHSDWVTAVVFSPDSKTIA-SASD 853

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D  + +++    ++   + T         +  +SPD   I   S+      + +  +   
Sbjct: 854 DHTVRLWN---ATSGAHQYTLEGHSSWVTAIVFSPDGKTIASASN---DHTVRLWNATTG 907

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--A 394
             ++  +         V+SP G +IA          + +        +  +E  +    A
Sbjct: 908 AHQKTLEGHSDWIRAVVFSPDGKIIASASDDKT---VRLWNATSGAHQKTLEGHSSWVTA 964

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             +SP G+++  +     D   +L++        TL
Sbjct: 965 IVFSPDGKTIASASD---DKTIRLWNATTGAHQYTL 997



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 64/189 (33%), Gaps = 17/189 (8%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFI 303
            D   + +      + A  FS + K    S   D  + +++    ++   + T       
Sbjct: 738 WDAHQQTLEGHSGGVTAVVFSPDSKTIA-SASDDHTVRLWN---ATSGAHQYTLEGHSGG 793

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +  +SPD   I   SD    + + +  +     ++  +         V+SP    IA 
Sbjct: 794 VRAVVFSPDGKIIASASD---DKTVRLWNATTGAHQKTLEGHSDWVTAVVFSPDSKTIAS 850

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                +   + +        +  +E  +    A  +SP G+++  +     D   +L++ 
Sbjct: 851 AS---DDHTVRLWNATSGAHQYTLEGHSSWVTAIVFSPDGKTIASASN---DHTVRLWNA 904

Query: 422 DLNGRNETL 430
                 +TL
Sbjct: 905 TTGAHQKTL 913


>gi|305665004|ref|YP_003861291.1| protease [Maribacter sp. HTCC2170]
 gi|88707416|gb|EAQ99661.1| protease, putative [Maribacter sp. HTCC2170]
          Length = 1081

 Score = 95.5 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 57/335 (17%), Positives = 135/335 (40%), Gaps = 44/335 (13%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGD---------FNSRILFVSESVVSGIIK 190
           + K++    A  R+I    +++  ++I   KG          FN+R+ F+++        
Sbjct: 183 VTKRYKGGTA--RQIW-KFTNESTEAIQLTKGYAGESHHPMWFNARVYFITDRDG----I 235

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA--------YATYDDEDILRVYLM 242
            ++  +D +G +++  T   D  +           V         Y   ++        +
Sbjct: 236 MNIWSIDENGNDLKQHTDHTDFDVRYANL-HKGNIVYQIGADIWHYNIQNNNKKKINIKL 294

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + +D+  ++     S  +    + +  G+R +I+ +       +   ++S      T+ 
Sbjct: 295 TSDLDQLREKWVENPSKYIT-SVNPDKKGERIVITARG----RAFVAPVKSGRLVEFTDK 349

Query: 301 LFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQG 358
             +    A +S D  ++   SD  G+ +   M SNG    + I+ + +   +    SP G
Sbjct: 350 KNVRFRDAVFSSDGKKVYTLSDESGEFEFVSMPSNGVGSHEAITNNGKVLRYAGKPSPDG 409

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +A+    G  F + +    GS +++  ++  + + +WSP  + + F +  D +T +++
Sbjct: 410 KWLAYDDLMGNMFVLNI--ATGSSKKISTKEEGIYSFSWSPDSKWIAFVQVAD-NTMAQI 466

Query: 419 YSIDLNGRNETLINT-------PAYASDPQWVGFM 446
           Y   L+      I T       PA++ D +++ F+
Sbjct: 467 YLYGLSSGASFPITTDRANSNYPAWSPDGKFIYFL 501



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 8/154 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTN-TLFINISASYSPDSSQIVFESDR 322
           FSS+GK+      +    +  S+      + E +TN    +  +   SPD   + ++ D 
Sbjct: 359 FSSDGKKVYTLSDESGEFEFVSMPSNGVGSHEAITNNGKVLRYAGKPSPDGKWLAYD-DL 417

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKD-G 380
            G   ++V+       K+IS  +E  Y    WSP    IAF + +      I +     G
Sbjct: 418 MGN--MFVLNIATGSSKKISTKEEGIY-SFSWSPDSKWIAFVQVADNTMAQIYLYGLSSG 474

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           +   +  + +N   P WSP G+ + F   ++  T
Sbjct: 475 ASFPITTDRANSNYPAWSPDGKFIYFLSDRNFTT 508



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 70/226 (30%), Gaps = 28/226 (12%)

Query: 221 PN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           P+    KV +A   + DI  V L          ++         P  S +GK    S   
Sbjct: 37  PDVHGNKVVFAA--EGDIWTVPL----SGGLAYKLTTHAEEERYPAISPDGKMIAFSASY 90

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS----QIVFESDREGKEQLYVMQSN 334
           +   +IYS+ +      R T     + +  ++PD         F +  +   QL  +   
Sbjct: 91  EGPTEIYSMPIDGGLPIRWTYESDFSRTNGWTPDGKIVYDTRAFATLPD--RQLVTIDIK 148

Query: 335 GSDQKRI--------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
              + R+        S D   +    V       +      G    I     + ++   L
Sbjct: 149 TKKKVRVPLSQASEASFDASGNTVFFVRPSDHGNVTKRYKGGTARQIWKFTNESTEAIQL 208

Query: 387 VED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +        P W      + F   +DG     ++SID NG +   
Sbjct: 209 TKGYAGESHHPMW--FNARVYFITDRDGIM--NIWSIDENGNDLKQ 250



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 6/105 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +AY     +D++    +      + K+I      I +  +S + K        D
Sbjct: 406 SPDGKWLAY-----DDLMGNMFVLNIATGSSKKISTKEEGIYSFSWSPDSKWIAFVQVAD 460

Query: 280 EA-MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
                IY   L S A+  +T     +   ++SPD   I F SDR 
Sbjct: 461 NTMAQIYLYGLSSGASFPITTDRANSNYPAWSPDGKFIYFLSDRN 505



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/245 (11%), Positives = 77/245 (31%), Gaps = 26/245 (10%)

Query: 167 TGEKGDFNSRILFVSESVVSGII--KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           T     F     +        +   +  +  +   G  + Y   +  +    P  SP+ +
Sbjct: 24  TVRSQGFEGYYQYPDVHGNKVVFAAEGDIWTVPLSGG-LAYKLTTHAEEERYPAISPDGK 82

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA----LISVQKDE 280
            +A+ +   E    +Y M       P R            ++ +GK        +   D 
Sbjct: 83  MIAF-SASYEGPTEIYSMPID-GGLPIRWTYESDFSRTNGWTPDGKIVYDTRAFATLPD- 139

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREG---------KEQLY 329
              + ++D+++    R+  +      AS+    + + F   SD              Q++
Sbjct: 140 -RQLVTIDIKTKKKVRVPLSQA--SEASFDASGNTVFFVRPSDHGNVTKRYKGGTARQIW 196

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              +  ++  ++++        P+W      + F         I  + ++G+  +   + 
Sbjct: 197 KFTNESTEAIQLTKGYAGESHHPMW--FNARVYFITDRDGIMNIWSIDENGNDLKQHTDH 254

Query: 390 SNLQA 394
           ++   
Sbjct: 255 TDFDV 259



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 53/125 (42%), Gaps = 8/125 (6%)

Query: 311 PD--SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           PD   +++VF ++ +    ++ +  +G    +++   E   + P  SP G +IAF+    
Sbjct: 37  PDVHGNKVVFAAEGD----IWTVPLSGGLAYKLTTHAEEERY-PAISPDGKMIAFSASYE 91

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               I  M  DG        +S+      W+P G+ +  +R        +L +ID+  + 
Sbjct: 92  GPTEIYSMPIDGGLPIRWTYESDFSRTNGWTPDGKIVYDTRAFATLPDRQLVTIDIKTKK 151

Query: 428 ETLIN 432
           +  + 
Sbjct: 152 KVRVP 156



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 31/73 (42%), Gaps = 1/73 (1%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           +++ ++   +SP+ + +A+    D  + ++YL       +   I   R+    P +S +G
Sbjct: 437 KEEGIYSFSWSPDSKWIAFVQVADNTMAQIYLYGLSSGASF-PITTDRANSNYPAWSPDG 495

Query: 270 KRALISVQKDEAM 282
           K       ++   
Sbjct: 496 KFIYFLSDRNFTT 508



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 92/303 (30%), Gaps = 84/303 (27%)

Query: 218 RFSPNQQKVAYAT----------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            F  +   V +            Y      +++        A +    +      P +  
Sbjct: 164 SFDASGNTVFFVRPSDHGNVTKRYKGGTARQIWKFTNESTEAIQLTKGYAGESHHPMWF- 222

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--------- 318
              R      +D  M+I+S+D   N  ++ T+    ++  +     + IV+         
Sbjct: 223 -NARVYFITDRDGIMNIWSIDENGNDLKQHTDHTDFDVRYANLHKGN-IVYQIGADIWHY 280

Query: 319 --------------ESDREGKEQLYV---------MQSNGSDQKRISQDKEASYFDPVWS 355
                          SD +   + +V         +  +   ++ +   +  ++  PV S
Sbjct: 281 NIQNNNKKKINIKLTSDLDQLREKWVENPSKYITSVNPDKKGERIVITARGRAFVAPVKS 340

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTW----------------- 397
             G L+ FT     +F   V   DG +   L +     +  +                  
Sbjct: 341 --GRLVEFTDKKNVRFRDAVFSSDGKKVYTLSDESGEFEFVSMPSNGVGSHEAITNNGKV 398

Query: 398 -------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-------AYASDPQWV 443
                  SP G+ L +      D    ++ +++   +   I+T        +++ D +W+
Sbjct: 399 LRYAGKPSPDGKWLAY-----DDLMGNMFVLNIATGSSKKISTKEEGIYSFSWSPDSKWI 453

Query: 444 GFM 446
            F+
Sbjct: 454 AFV 456


>gi|302347850|ref|YP_003815488.1| acylamino-acid-releasing enzyme [Acidilobus saccharovorans 345-15]
 gi|302328262|gb|ADL18457.1| acylamino-acid-releasing enzyme [Acidilobus saccharovorans 345-15]
          Length = 646

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 55/314 (17%), Positives = 96/314 (30%), Gaps = 63/314 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY--ATYD 232
           SR LFV         +    +   DG +   +T         P +SP+ Q +A+      
Sbjct: 22  SRALFVVSRPDLQQNRYDSSIWLYDGRSYYPVTSGPGDSC--PAWSPDGQTIAFIRTVRQ 79

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------------- 278
           +    +  +M  R    P  +  +     A  +S  G       ++              
Sbjct: 80  EGQPAQTSVMLMRPGYEPVPLFTWSFGASAISWSPAGSSIAFLARRPLGQGEWKDYSKRE 139

Query: 279 ------------------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                             D   +IY V        RLT+        ++SPD   I +  
Sbjct: 140 ALVIERLPPFFNGEGYIFDRPRNIYLVSANGGEPRRLTSHALDVSDFAWSPDGRSIAYVK 199

Query: 321 D----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKF 371
                    ++L ++     +  ++    + S     WS  G+ IA     F +     +
Sbjct: 200 QLEEVHAQYDELRLINVETGEDVQLL--SKVSIAGLAWSSDGNSIALLMHRFERGLSSHY 257

Query: 372 AIGVMKKDGSQE--------RLLVEDSNLQA--PT----WSPSGRSLIFSRKKDGDTGSK 417
            +        +         R L+   N +A  P+       SG  L FS    G   + 
Sbjct: 258 KLHSYNLKTGELTKVELGLDRNLLNSVNSEARGPSCTKPIQASGGWLYFSVSDAGR--AW 315

Query: 418 LYSIDLNGRNETLI 431
           LY   L+GR E ++
Sbjct: 316 LYRATLSGRVEPVL 329



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 70/196 (35%), Gaps = 49/196 (25%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSP 311
           +++ +P  S +G RAL  V + +         I+  D    +   +T+    +   ++SP
Sbjct: 10  TLVSSPAASPDGSRALFVVSRPDLQQNRYDSSIWLYD--GRSYYPVTSGPG-DSCPAWSP 66

Query: 312 DSSQIVF--ESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           D   I F     +EG+     + +M+         +    AS     WSP G  IAF   
Sbjct: 67  DGQTIAFIRTVRQEGQPAQTSVMLMRPGYEPVPLFTWSFGAS--AISWSPAGSSIAFLAR 124

Query: 367 S--------------------------GEKF------AIGVMKKDGSQERLLVEDSNLQA 394
                                      GE +       I ++  +G + R L   +   +
Sbjct: 125 RPLGQGEWKDYSKREALVIERLPPFFNGEGYIFDRPRNIYLVSANGGEPRRLTSHALDVS 184

Query: 395 P-TWSPSGRSLIFSRK 409
              WSP GRS+ + ++
Sbjct: 185 DFAWSPDGRSIAYVKQ 200


>gi|145532892|ref|XP_001452197.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124419883|emb|CAK84800.1| unnamed protein product [Paramecium tetraurelia]
          Length = 594

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 53/338 (15%), Positives = 116/338 (34%), Gaps = 44/338 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK------ 170
                       RLWDVK  +Q    K      + R +  +    I  S + ++      
Sbjct: 198 TTLASGSYDKSIRLWDVKTGQQ--KAKLDGLSEAVRSVNFSPDGTILASGSNDRFIRLWD 255

Query: 171 ---------GDFNSRILFVS------ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
                     D +++ ++         ++ SG    S+ + D +    +       + ++
Sbjct: 256 VKTGQLKAQLDGHTQQVYSVTFSSDGTTLASGSYDKSIRLWDVETGQQKAKLDGHSREVY 315

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              FS +   +A  +YD      + L D +I +   ++      + +  FS +G     S
Sbjct: 316 SVAFSSDGTTLASGSYDK----SIRLWDVKIGQEKAKLDGHSREVYSVNFSPDGTTLA-S 370

Query: 276 VQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
              D ++ ++  D+++   + +L   L    S ++SPD + +   S     + + +    
Sbjct: 371 GSLDNSIRLW--DVKTGQQKAQLDGHLSYVYSVNFSPDGTTLASGS---ADKSIRLWDVE 425

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              Q           +   +SP G  +A          I +      Q++  ++  +  A
Sbjct: 426 TGQQIAKLDGHSHYVYSVNFSPDGTRLASGSLDNS---IRLWDVTIGQQKAKLDGHSSCA 482

Query: 395 PT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +  +SP G +L       G   + +   D+    E L
Sbjct: 483 YSVNFSPDGTTLA-----SGSLDNSIRLWDVKTSKEIL 515



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 92/275 (33%), Gaps = 37/275 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDV+  +Q                 H  S ++Y       G     
Sbjct: 282 TTLASGSYDKSIRLWDVETGQQKAKLD-----------GH--SREVYSVAFSSDG----- 323

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG    S+ + D      +       + ++   FSP+   +A  + D+   
Sbjct: 324 -----TTLASGSYDKSIRLWDVKIGQEKAKLDGHSREVYSVNFSPDGTTLASGSLDN--- 375

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D +  +   ++    S + +  FS +G     S   D+++ ++  D+++     
Sbjct: 376 -SIRLWDVKTGQQKAQLDGHLSYVYSVNFSPDGTTLA-SGSADKSIRLW--DVETGQQIA 431

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L        S ++SPD +++   S       + +       QK       +  +   +S
Sbjct: 432 KLDGHSHYVYSVNFSPDGTRLASGSL---DNSIRLWDVTIGQQKAKLDGHSSCAYSVNFS 488

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           P G  +A          I +     S+E L  + S
Sbjct: 489 PDGTTLASGSLDNS---IRLWDVKTSKEILQSDSS 520



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 116/336 (34%), Gaps = 38/336 (11%)

Query: 117 IKEGKDRLRVEFRLWDVKDR----------KQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
                  L    RLWDVK            +Q+    F S   +    ++  S  ++   
Sbjct: 72  TTLASGSLDNSIRLWDVKTGQQKAQLDGHTQQVYSVTFSSDGTTLASGSNDNSIRLWDVK 131

Query: 167 TGE---KGDFNSRILFVSE------SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           TG+   K + +++ +          ++ SG   NS+ + D                ++  
Sbjct: 132 TGQQKAKLEGHTQQVESVNFSPDCTTLASGSYDNSIRLWDITTGQQNAKVDCHSHYIYSV 191

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A  +YD      + L D +  +   ++      + +  FS +G   L S  
Sbjct: 192 NFSPDGTTLASGSYDK----SIRLWDVKTGQQKAKLDGLSEAVRSVNFSPDGT-ILASGS 246

Query: 278 KDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + ++  D+++   + +L        S ++S D + +   S     + + +      
Sbjct: 247 NDRFIRLW--DVKTGQLKAQLDGHTQQVYSVTFSSDGTTLASGSY---DKSIRLWDVETG 301

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            QK          +   +S  G  +A   +      I +      QE+  ++  + +  +
Sbjct: 302 QQKAKLDGHSREVYSVAFSSDGTTLASGSYDKS---IRLWDVKIGQEKAKLDGHSREVYS 358

Query: 397 --WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             +SP G +L        D   +L+ +    +   L
Sbjct: 359 VNFSPDGTTLA---SGSLDNSIRLWDVKTGQQKAQL 391



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 86/245 (35%), Gaps = 27/245 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                       FSP+   +A  + D+     + L D +  +   ++      + +  FS
Sbjct: 55  LDGHSSYAKSVNFSPDGTTLASGSLDN----SIRLWDVKTGQQKAQLDGHTQQVYSVTFS 110

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGK 325
           S+G     S   D ++ ++  D+++   + +L        S ++SPD + +   S     
Sbjct: 111 SDGTTLA-SGSNDNSIRLW--DVKTGQQKAKLEGHTQQVESVNFSPDCTTLASGSY---D 164

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +       Q           +   +SP G  +A   +      I +      Q++ 
Sbjct: 165 NSIRLWDITTGQQNAKVDCHSHYIYSVNFSPDGTTLASGSYDKS---IRLWDVKTGQQKA 221

Query: 386 LVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-------LNGRNETLINTPAY 436
            ++     +++  +SP G  L        D   +L+ +        L+G  + + +   +
Sbjct: 222 KLDGLSEAVRSVNFSPDGTILA---SGSNDRFIRLWDVKTGQLKAQLDGHTQQVYSV-TF 277

Query: 437 ASDPQ 441
           +SD  
Sbjct: 278 SSDGT 282



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 64/189 (33%), Gaps = 15/189 (7%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFI 303
           R D    ++    S   +  FS +G     S   D ++ ++  D+++   + +L      
Sbjct: 47  RQDYKKAKLDGHSSYAKSVNFSPDGTTLA-SGSLDNSIRLW--DVKTGQQKAQLDGHTQQ 103

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++S D + +   S+      + +       QK   +          +SP    +A 
Sbjct: 104 VYSVTFSSDGTTLASGSN---DNSIRLWDVKTGQQKAKLEGHTQQVESVNFSPDCTTLAS 160

Query: 364 TKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +      I +      Q+  ++      + +  +SP G +L        D   +L+ +
Sbjct: 161 GSYDNS---IRLWDITTGQQNAKVDCHSHYIYSVNFSPDGTTLASGSY---DKSIRLWDV 214

Query: 422 DLNGRNETL 430
               +   L
Sbjct: 215 KTGQQKAKL 223


>gi|289583362|ref|YP_003481772.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
 gi|289532860|gb|ADD07210.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
          Length = 621

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 93/248 (37%), Gaps = 28/248 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--S 275
             +P+  ++A+   D    ++V+ +       P +   +   +    +S +G        
Sbjct: 18  TVAPDG-RLAF-RADTTGTMQVWTLG-EPGGWPTQQTFYDERVSFVDWSPSGDVIAFGKD 74

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDR--EGKEQLYVMQ 332
              DE   +Y +        +LT+    I+   ++SPD  ++ F ++R       +YVM 
Sbjct: 75  TGADEHDQLYRLSPDDRTIVQLTDRPDAIHQWGAWSPDGDRVAFTANRRTTADFDVYVMA 134

Query: 333 -------------SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKK 378
                        ++GS+  R+  + +       WSP GD +      +     + V++ 
Sbjct: 135 VDTGEGGTDHEGGADGSEPTRV-CEGDGRISVVGWSPSGDRLLLRNAHASSDIDLSVVEV 193

Query: 379 DGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           D  + R +    + +    PT+ P G ++       GDT ++L  IDL       +    
Sbjct: 194 DSGERRHVTPHEDPARYSHPTFGPDGEAIYCVSDTFGDT-TELIRIDLATLEAEPVTVDD 252

Query: 436 YASDPQWV 443
             SD  W 
Sbjct: 253 QESD-DWS 259



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 72/206 (34%), Gaps = 23/206 (11%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                 + +G R          M ++++        + T          +SP    I F 
Sbjct: 14  TRGATVAPDG-RLAFRADTTGTMQVWTLGEPGGWPTQQTFYDERVSFVDWSPSGDVIAFG 72

Query: 320 SDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGV 375
            D      +QLY +  +     +++   +A +    WSP GD +AFT  + +   F + V
Sbjct: 73  KDTGADEHDQLYRLSPDDRTIVQLTDRPDAIHQWGAWSPDGDRVAFTANRRTTADFDVYV 132

Query: 376 M-------------KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           M               DGS+   + E D  +    WSPSG  L+  R     +   L  +
Sbjct: 133 MAVDTGEGGTDHEGGADGSEPTRVCEGDGRISVVGWSPSGDRLL-LRNAHASSDIDLSVV 191

Query: 422 DLNGRNETLIN---TPAYASDPQWVG 444
           +++      +     PA  S P +  
Sbjct: 192 EVDSGERRHVTPHEDPARYSHPTFGP 217



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 74/248 (29%), Gaps = 34/248 (13%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI- 236
           +            + L  +  D   I  LT   D I     +SP+  +VA+         
Sbjct: 68  VIAFGKDTGADEHDQLYRLSPDDRTIVQLTDRPDAIHQWGAWSPDGDRVAFTANRRTTAD 127

Query: 237 LRVYLMDTRI------------DRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMD 283
             VY+M                   P R+      I    +S +G R L+        +D
Sbjct: 128 FDVYVMAVDTGEGGTDHEGGADGSEPTRVCEGDGRISVVGWSPSGDRLLLRNAHASSDID 187

Query: 284 IYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKR 340
           +  V++ S     +T           ++ PD   I   SD  G   +L  +     + + 
Sbjct: 188 LSVVEVDSGERRHVTPHEDPARYSHPTFGPDGEAIYCVSDTFGDTTELIRIDLATLEAEP 247

Query: 341 ISQDKEASYFDPVWSPQG-------DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           ++ D + S     WS            +A+ +       + V      Q R   E   + 
Sbjct: 248 VTVDDQESD---DWSVDEFGLDAATGRLAYARNVDGYSELFV-----GQLRTPTEADTVS 299

Query: 394 APTWSPSG 401
                P G
Sbjct: 300 VGV--PDG 305


>gi|284124907|ref|ZP_06386977.1| WD-40 repeat protein [Candidatus Poribacteria sp. WGA-A3]
 gi|283829204|gb|EFC33622.1| WD-40 repeat protein [Candidatus Poribacteria sp. WGA-A3]
          Length = 720

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 102/312 (32%), Gaps = 44/312 (14%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLW++   +++            R   HT  D +        G   +R++  + S     
Sbjct: 57  RLWNMATGQEV-----------RRFTGHT--DRVVSVAFSPDG---TRLVSAATS----- 95

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              ++ + +               ++    FSP+  ++A A+ D+     + L D    +
Sbjct: 96  -DRAIRLWNVATGEEVRRFEGHTSLIRSAVFSPDGTRLASASADE----TIRLWDIATGQ 150

Query: 249 APKRIGNFRSMILAPRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
             +R     S + +  FS +G + +      +   D  + ++ +        R T     
Sbjct: 151 EVRRFEGHTSSVNSVAFSPDGTQLVSGSGDFTSSSDNIVRLWDI-ATGQEIRRFTGHSHA 209

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S  +SPD +Q+   SD      + +       + R  +         ++SP G  +  
Sbjct: 210 VSSVVFSPDGTQLASGSD---DNTIRLWDVVTGQEARRFEGHTDDINTVIFSPDGTHLG- 265

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +        + +      QE          + +  +SP G  L       G   S ++  
Sbjct: 266 SGSGLRDLTVRLWDVATGQEVRRFKGHTGQVYSVAFSPDGSHLA-----SGTRNSSIHLW 320

Query: 422 DL-NGRNETLIN 432
           D+  G+    I 
Sbjct: 321 DVATGQEARRIQ 332



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 79/228 (34%), Gaps = 19/228 (8%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                +    FSP+  ++A           V L +    +  +R       +++  FS +
Sbjct: 30  GHTGAVLSVDFSPDGTQLA----SAGSHRTVRLWNMATGQEVRRFTGHTDRVVSVAFSPD 85

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G R + +   D A+ +++V        R      +  SA +SPD +++   S     E +
Sbjct: 86  GTRLVSAATSDRAIRLWNV-ATGEEVRRFEGHTSLIRSAVFSPDGTRLASAS---ADETI 141

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKKDGSQE 383
            +       + R  +   +S     +SP G  +      FT  S     +  +   G + 
Sbjct: 142 RLWDIATGQEVRRFEGHTSSVNSVAFSPDGTQLVSGSGDFTSSSDNIVRLWDI-ATGQEI 200

Query: 384 RLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           R        + +  +SP G  L        D   +L+ + + G+    
Sbjct: 201 RRFTGHSHAVSSVVFSPDGTQLASGSD---DNTIRLWDV-VTGQEARR 244



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 53/308 (17%), Positives = 105/308 (34%), Gaps = 45/308 (14%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWD+   ++I  ++F          +H +S  ++       G            + SG 
Sbjct: 190 RLWDIATGQEI--RRFTGH-------SHAVSSVVF----SPDG----------TQLASGS 226

Query: 189 IKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             N++ + D   G   R      D I     FSP+   +   +      L V L D    
Sbjct: 227 DDNTIRLWDVVTGQEARRFEGHTDDINTVI-FSPDGTHL--GSGSGLRDLTVRLWDVATG 283

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  +R       + +  FS +G     S  ++ ++ ++ V        R+ N   +  S 
Sbjct: 284 QEVRRFKGHTGQVYSVAFSPDGSHLA-SGTRNSSIHLWDV-ATGQEARRIQNHTALIHSI 341

Query: 308 SYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            +SPD   +       G +   + +      ++ R  +    +    V+S  G  +    
Sbjct: 342 VFSPDGIHLA-----SGAQDATIRLWDVVTGEEVRRFKGHTGAVSSVVFSSDGTQLVSGS 396

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +      I +     SQE    E    +  +  +SP G  L  + +   D   +L+ +  
Sbjct: 397 YDRT---IRLWDVSTSQEMYRFEGHTDRVYSVIFSPDGTRLASASQ---DATIRLWDV-A 449

Query: 424 NGRNETLI 431
            G+    +
Sbjct: 450 TGQEVRRL 457



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 105/325 (32%), Gaps = 51/325 (15%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    RLWDV   +++            R   HT                 S ++F
Sbjct: 351 ASGAQDATIRLWDVVTGEEV-----------RRFKGHT--------------GAVSSVVF 385

Query: 180 VSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            S+    VSG    ++ + D   +   Y        ++   FSP+  ++A A+ D     
Sbjct: 386 SSDGTQLVSGSYDRTIRLWDVSTSQEMYRFEGHTDRVYSVIFSPDGTRLASASQD----A 441

Query: 238 RVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRAL----ISVQKDEAMDIYSVDLQSN 292
            + L D    +  +R+       + +  FS +G + +           +  I   D+ + 
Sbjct: 442 TIRLWDVATGQEVRRLEQGDVFWVNSLAFSLDGTQLVSGGASQSSGGTSGKIRLWDVATG 501

Query: 293 ATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              R +    I+   S ++SPD +Q+    D    + + +       + R          
Sbjct: 502 QMVR-SFGGSISGVGSLTFSPDGTQLASGLD---DDTIRLWDVVTGQEVRRFTGHTRGAS 557

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRK 409
             V+S  G  +           I +      Q+   L     + +   S  GR +     
Sbjct: 558 SIVFSSDGSHLVSGSSDSS---IRMWDVATGQQTDRLSHGYYVFSMALSNDGRLIA---- 610

Query: 410 KDGDTGSKLYSIDLNGRNETLINTP 434
             G T  +L+        ET++++P
Sbjct: 611 SAGGTVLRLWDATAT-VLETVLSSP 634



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 85/270 (31%), Gaps = 29/270 (10%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            +          RLWDV   +++            R++       +        G   ++
Sbjct: 432 TRLASASQDATIRLWDVATGQEV------------RRLEQGDVFWVNSLAFSLDG---TQ 476

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           ++    S  SG     + + D     +          +    FSP+  ++A    DD   
Sbjct: 477 LVSGGASQSSGGTSGKIRLWDVATGQMVRSFGGSISGVGSLTFSPDGTQLASGLDDD--- 533

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L D    +  +R         +  FSS+G   + S   D ++ ++  D+ +     
Sbjct: 534 -TIRLWDVVTGQEVRRFTGHTRGASSIVFSSDGSHLV-SGSSDSSIRMW--DVATGQQTD 589

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-ASYFDPVWS 355
             +  +   S + S D   I       G   L +  +  +  + +    E  + F    +
Sbjct: 590 RLSHGYYVFSMALSNDGRLIA----SAGGTVLRLWDATATVLETVLSSPEIPATFTHYPN 645

Query: 356 PQG--DLIAFTKFSGEKFAIGVMKKDGSQE 383
           P G    I ++     +  + V    G + 
Sbjct: 646 PAGISATIEYSLLKAGQVQLSVHDLLGREV 675


>gi|237714507|ref|ZP_04544988.1| prolyl oligopeptidase [Bacteroides sp. D1]
 gi|262406372|ref|ZP_06082921.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294643252|ref|ZP_06721078.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294806445|ref|ZP_06765286.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|229445276|gb|EEO51067.1| prolyl oligopeptidase [Bacteroides sp. D1]
 gi|262355075|gb|EEZ04166.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292641375|gb|EFF59567.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294446308|gb|EFG14934.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 700

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 63/390 (16%), Positives = 131/390 (33%), Gaps = 78/390 (20%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDV---KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            G        +     V +  + V   K  +++       S     +I HT   +    +
Sbjct: 55  IGEFAVSPDGKKIAYTVAY--YSVPENKSNREVFVMNADGSENQ--QITHTPYQE--NEV 108

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T  KG   +++ F+S    +    + L  M+ DG+  + LT     I      SP+ +K+
Sbjct: 109 TWIKGG--TKLAFLS----NDNGSSQLYEMNPDGSGRKQLTHYDGDIEGY-SISPDGKKL 161

Query: 227 AYATY------------DDEDILRVYLMDTRIDRAPKRIG--------NFRSMILA---- 262
            + +             D      + + D       + +         +F    ++    
Sbjct: 162 LFISQVKTKESTADKYPDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVD 221

Query: 263 ------------P-------RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATE 295
                       P        +++   +   + +K            DIY  DL +  TE
Sbjct: 222 ILNGEPYESPMKPWGGIEQLAWNTASDKVAYTCRKKTGLEYAISTNSDIYVYDLNTQKTE 281

Query: 296 RLTN-TLFINISASYSPDSSQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASY 349
            +T      + +  YSPD   I ++S +R+G      +L++M     +++ +S+  E++ 
Sbjct: 282 NITEENKGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKAFESNV 341

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              VW     +I FT     +  I  +       + +           +  G  LI +++
Sbjct: 342 DAFVWGADAKMIYFTGVWHGESQIYALDLANDSVKAITSGMYDYEGV-ALFGDKLI-AKR 399

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                G ++Y++ L+G    L        D
Sbjct: 400 HSMSMGDEIYTVALDGSTTQLTQENKQIYD 429



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/321 (15%), Positives = 109/321 (33%), Gaps = 69/321 (21%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG+  + +T +  Q      +     K+A+ + D+       +
Sbjct: 74  YSVPENKSNREVFVMNADGSENQQITHTPYQENEV-TWIKGGTKLAFLSNDNGSSQLYEM 132

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------------- 278
                 R  K++ ++   I     S +GK+ L   Q                        
Sbjct: 133 NPDGSGR--KQLTHYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTD 190

Query: 279 ----------DEAMDIYSVDLQSNATERLTNTLFINISA--------------SYSPDSS 314
                       A   +  D   N    + + L  N                 +++  S 
Sbjct: 191 LMYKHWDEWVTTAPHPFVADFDGNGISNIVDIL--NGEPYESPMKPWGGIEQLAWNTASD 248

Query: 315 QIVFE-SDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++ +    + G          +YV   N    + I+++ +    +P +SP G  IA+   
Sbjct: 249 KVAYTCRKKTGLEYAISTNSDIYVYDLNTQKTENITEENKGYDTNPQYSPDGKYIAWQSM 308

Query: 367 SGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             + +      + +M  +  ++R + +  +SN+ A  W    + + F+    G+  S++Y
Sbjct: 309 ERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFVWGADAKMIYFTGVWHGE--SQIY 366

Query: 420 SIDLNGRNETLINTPAYASDP 440
           ++DL   +   I +  Y  + 
Sbjct: 367 ALDLANDSVKAITSGMYDYEG 387



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 92/280 (32%), Gaps = 67/280 (23%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISV------QKD 279
           T D     +V +  + I    KR+          I     S +GK+   +V      +  
Sbjct: 21  TKDAGKTDQVLIEKSDIKIEGKRMTPEALWAMGRIGEFAVSPDGKKIAYTVAYYSVPENK 80

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +++ ++   +  +++T+T +     ++    +++ F S+  G  QLY M  +GS +K
Sbjct: 81  SNREVFVMNADGSENQQITHTPYQENEVTWIKGGTKLAFLSNDNGSSQLYEMNPDGSGRK 140

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK----------------------------- 370
           +++   +        SP G  + F      K                             
Sbjct: 141 QLTHY-DGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTDLMYKHWDEW 199

Query: 371 ----FAIGVMKKDGSQERLLVEDSNLQAPTWSPS--------------GRSLIFS-RKKD 411
                   V   DG+    +V D     P  SP                  + ++ RKK 
Sbjct: 200 VTTAPHPFVADFDGNGISNIV-DILNGEPYESPMKPWGGIEQLAWNTASDKVAYTCRKKT 258

Query: 412 G-----DTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           G      T S +Y  DLN +    I      Y ++PQ+  
Sbjct: 259 GLEYAISTNSDIYVYDLNTQKTENITEENKGYDTNPQYSP 298


>gi|116207482|ref|XP_001229550.1| hypothetical protein CHGG_03034 [Chaetomium globosum CBS 148.51]
 gi|88183631|gb|EAQ91099.1| hypothetical protein CHGG_03034 [Chaetomium globosum CBS 148.51]
          Length = 1457

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 90/292 (30%), Gaps = 37/292 (12%)

Query: 116  VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            + +     L +   L   +      G++      S R +A +  D I  S + ++     
Sbjct: 865  IGQLSSGLLSIRKILHAAQTTGARTGRRSRGMAHSVRAVAFSPDDKILASASDDQ----- 919

Query: 176  RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                            ++ + D      R         +    FSP+ + +  A+YDD  
Sbjct: 920  ----------------TIRLWDTATGTHRQTLEGHGSWVRAVAFSPDGKTLVSASYDD-- 961

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
               + L DT      + +      +    FS + K    S   D  + ++  D  ++A  
Sbjct: 962  --TIRLWDTATGAHRQTLKWHSRSVKVVAFSPDSKTLA-SASDDRTIRLW--DTATSAYR 1016

Query: 296  R-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            + L           +SPD   +   S       + +  +     ++  +   A       
Sbjct: 1017 QTLEGHSASVTVVEFSPDGKTLASASY---DNTIRLWDTATGTHRQTLEGHSAWVSTVAI 1073

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSL 404
            SP G+ +A          I +        R  +E       A  +SP G+ L
Sbjct: 1074 SPDGNTLASASHDK---KIRLWDTATGAHRQTLEGHGNSVSAVAFSPDGKCL 1122



 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 89/253 (35%), Gaps = 20/253 (7%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             I+  L      GA     +      +    FSP+ + +A A+ D      + L DT   
Sbjct: 874  SIRKILHAAQTTGARTGRRSRGMAHSVRAVAFSPDDKILASASDDQ----TIRLWDTATG 929

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS- 306
               + +    S + A  FS +GK  + S   D+ + ++  D  + A  +       ++  
Sbjct: 930  THRQTLEGHGSWVRAVAFSPDGKTLV-SASYDDTIRLW--DTATGAHRQTLKWHSRSVKV 986

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             ++SPDS  +   SD      + +  +  S  ++  +   AS     +SP G  +A   +
Sbjct: 987  VAFSPDSKTLASASD---DRTIRLWDTATSAYRQTLEGHSASVTVVEFSPDGKTLASASY 1043

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  I +        R  +E  +        SP G +L  +     D   +L+     
Sbjct: 1044 DNT---IRLWDTATGTHRQTLEGHSAWVSTVAISPDGNTLASASH---DKKIRLWDT-AT 1096

Query: 425  GRNETLINTPAYA 437
            G +   +     +
Sbjct: 1097 GAHRQTLEGHGNS 1109


>gi|307294644|ref|ZP_07574486.1| WD40-like beta Propeller containing protein [Sphingobium
           chlorophenolicum L-1]
 gi|306879118|gb|EFN10336.1| WD40-like beta Propeller containing protein [Sphingobium
           chlorophenolicum L-1]
          Length = 680

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 90/286 (31%), Gaps = 65/286 (22%)

Query: 214 LFEPRFSPNQQKVAYATY-----DDEDILRVYLMDT-RIDRAPKRIGNFRSMILA-PRFS 266
           L  P  SP+ Q +AY         +     +YL+D  +    P+ I +      + P FS
Sbjct: 40  LSAPAVSPDGQWLAYQLRVTDLAGNRGRTDLYLLDLSKPGATPRMIASTPDKNESVPAFS 99

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---- 322
           ++GK       +     ++ + L   A E++T           SP   ++   +DR    
Sbjct: 100 ADGKSLYYLSNQSGDDQLWRIPLAGGAAEQVTQAPGGISGFHLSPAGDRVALWADRPVGA 159

Query: 323 ---------------------------------EGKEQLYVMQSNGSDQKRIS------- 342
                                              + Q++VM  +G     +        
Sbjct: 160 KTLDDTKPAAPPGAGTGRVYDQLFTRHWDTWSDGQRSQIFVMPLSGGKAVSVMGALVGDS 219

Query: 343 -QDKEASYFDPVWSPQGDLIAFTKFSGEKF-------AIGVMKKDGS-QERLLVE--DSN 391
                    +  WS  G  + F      +         I  ++ DGS     L +  D+ 
Sbjct: 220 PSKPFGGAEEIAWSADGKTLFFALREAGRIESLSTNLNIFAVRADGSAAPVNLTDANDAT 279

Query: 392 LQAPTWSPSGRSLIFSR-KKDGDTGSKLYSI--DLNGRNETLINTP 434
              PT SP G+ L ++  K+ G    +L  +  D+       +  P
Sbjct: 280 DTMPTVSPDGKWLAYAAMKRPGYESDRLVLMLRDIATGETKALTEP 325



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 96/313 (30%), Gaps = 26/313 (8%)

Query: 143 KFFSSPASWR-KIAHTISDDIYQSITGEKGDFNS----RILFVSESVVSGIIKNSLCVMD 197
                   WR  +A   ++ + Q+  G  G   S    R+   ++  V     +      
Sbjct: 110 NQSGDDQLWRIPLAGGAAEQVTQAPGGISGFHLSPAGDRVALWADRPVGAKTLDDTKPAA 169

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             GA    +        ++  +S + Q+             V +M   +  +P +     
Sbjct: 170 PPGAGTGRVYDQLFTRHWD-TWS-DGQRSQIFVMPLSGGKAVSVMGALVGDSPSKP---F 224

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--------SNATERLTN-TLFINISAS 308
                  +S++GK    ++++   ++  S +L         S A   LT+     +   +
Sbjct: 225 GGAEEIAWSADGKTLFFALREAGRIESLSTNLNIFAVRADGSAAPVNLTDANDATDTMPT 284

Query: 309 YSPDSSQIVFES-DREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            SPD   + + +  R G E     L +      + K +++  + S     W   G  I  
Sbjct: 285 VSPDGKWLAYAAMKRPGYESDRLVLMLRDIATGETKALTEPWDRSVASIAWEADGKGIIV 344

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           T        +  +     +   L +  +  +    P G  +              + +  
Sbjct: 345 TADDVLDHPVFRVDTASGKVTRLTQAGHSGSVVPLPRGGFVYALDSIQSPADF--WKMPA 402

Query: 424 NGRNETLINTPAY 436
            G+   L +  A 
Sbjct: 403 KGKPVRLTSVNAE 415



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 13/103 (12%)

Query: 347 ASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKD--GSQERLL--VEDSNLQAPT 396
                P  SP G  +A+         +  +  + ++     G+  R++    D N   P 
Sbjct: 38  NRLSAPAVSPDGQWLAYQLRVTDLAGNRGRTDLYLLDLSKPGATPRMIASTPDKNESVPA 97

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYAS 438
           +S  G+SL +   + GD   +L+ I L  G  E +   P   S
Sbjct: 98  FSADGKSLYYLSNQSGD--DQLWRIPLAGGAAEQVTQAPGGIS 138


>gi|298243303|ref|ZP_06967110.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297556357|gb|EFH90221.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 650

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 86/254 (33%), Gaps = 33/254 (12%)

Query: 221 PNQQKVAYA---TYDDEDILRVYLMDTRIDR---APKRIGNFRSMILAPRFSSNGKRALI 274
           P+  +VA+       +E   R  +    ++     P  +         PR+S +G+    
Sbjct: 44  PDGTRVAFVISEFVGEEQQRRSQIWTLALNDSQARPVPLLRDIKQANNPRWSPDGRWLAF 103

Query: 275 SVQKDEAM---DIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
               +       +Y VD Q     R+ T    I +   +SPD+  + F S    +++   
Sbjct: 104 VGVAEGEREKSQLYLVDAQGGTPRRVCTMPNGI-LDLEWSPDACCLAFTSFEGEEQKHDP 162

Query: 331 MQSNGSDQKRIS------------QDKEASYFDPVWSPQGDLIA--FTKFSGEK----FA 372
           +  N    +R+                E S ++  WSP    +A  ++    E       
Sbjct: 163 LVLNLGRHRRLWTIYPQISIPQPITSPELSVWEFSWSPDSSQLALYYSTLPDENGWYGGQ 222

Query: 373 IGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR---KKDGDTGSKLYSIDLNGRNE 428
           +GV+  +G   R L   D       W P G+ L +              L+ + ++G +E
Sbjct: 223 VGVVTANGGAVRQLTLLDRQASNLVWHPDGKRLAYVSGDWSDRCHGAGDLFLLSMDGISE 282

Query: 429 TLINTPAYASDPQW 442
               TP       W
Sbjct: 283 VRNLTPGAEYSVHW 296



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 106/279 (37%), Gaps = 34/279 (12%)

Query: 175 SRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATY 231
           +R+ FV           ++ +  +  + +  R +   RD +    PR+SP+ + +A+   
Sbjct: 47  TRVAFVISEFVGEEQQRRSQIWTLALNDSQARPVPLLRDIKQANNPRWSPDGRWLAFVGV 106

Query: 232 DDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM--DIYSVD 288
            + +  +  L         P+R+    + IL   +S +      +  + E    D   ++
Sbjct: 107 AEGEREKSQLYLVDAQGGTPRRVCTMPNGILDLEWSPDACCLAFTSFEGEEQKHDPLVLN 166

Query: 289 LQSNATERLTNTLFIN-----ISA-------SYSPDSSQIV-FES---DREGKE--QLYV 330
           L        T    I+      S        S+SPDSSQ+  + S   D  G    Q+ V
Sbjct: 167 L-GRHRRLWTIYPQISIPQPITSPELSVWEFSWSPDSSQLALYYSTLPDENGWYGGQVGV 225

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDG-SQER 384
           + +NG   ++++     +  + VW P G  +A+              + ++  DG S+ R
Sbjct: 226 VTANGGAVRQLTLLDRQA-SNLVWHPDGKRLAYVSGDWSDRCHGAGDLFLLSMDGISEVR 284

Query: 385 LLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            L   +  ++    W   G  L F   KD      ++++
Sbjct: 285 NLTPGAEYSVHWCQWLAGGEELFFLAVKDLTYIQGIHAV 323



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 67/183 (36%), Gaps = 29/183 (15%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQK 339
            + +   A  +L     +      +PD +++ F        +++ + Q++ +  N S  +
Sbjct: 23  RIPIGPGALSQLRTPSDV----HINPDGTRVAFVISEFVGEEQQRRSQIWTLALNDSQAR 78

Query: 340 RISQDKEA-SYFDPVWSPQGDLIAFTKFSGE---KFAIGVMKKDGSQERLL-VEDSNLQA 394
            +   ++     +P WSP G  +AF   +     K  + ++   G   R +    + +  
Sbjct: 79  PVPLLRDIKQANNPRWSPDGRWLAFVGVAEGEREKSQLYLVDAQGGTPRRVCTMPNGILD 138

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDP-------Q 441
             WSP    L F+  +  +       ++L GR+  L      I+ P   + P        
Sbjct: 139 LEWSPDACCLAFTSFEGEEQKHDPLVLNL-GRHRRLWTIYPQISIPQPITSPELSVWEFS 197

Query: 442 WVG 444
           W  
Sbjct: 198 WSP 200


>gi|260174446|ref|ZP_05760858.1| prolyl oligopeptidase family protein [Bacteroides sp. D2]
 gi|315922713|ref|ZP_07918953.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313696588|gb|EFS33423.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 700

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 65/390 (16%), Positives = 129/390 (33%), Gaps = 78/390 (20%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDV---KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            G        +     V +  + V   K  +++       S     +I HT   +    +
Sbjct: 55  IGGFAVSPDGKKIAYTVAY--YSVPENKSNREVFVMNADGSENQ--QITHTPYQE--NEV 108

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T  KG   +++ F+S    +    + L  M+ DG+  + LT     I      SP+ +K+
Sbjct: 109 TWIKGG--TKLAFLS----NDNGSSQLYEMNPDGSGRKQLTNYDGDIEGY-SISPDGKKL 161

Query: 227 AYATY------------DDEDILRVYLMDTRIDRAPKRIG--------NFRSMILA---- 262
            + +             D      + + D       + +         +F    ++    
Sbjct: 162 LFISQVKTKESTADKYPDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVD 221

Query: 263 -----PRFSS--------------NGKRALISVQK--------DEAMDIYSVDLQSNATE 295
                P  S                  +   + +K            DIY  DL +  TE
Sbjct: 222 ILNDEPYESPMKPWGGIEQLAWNMTSDKVAYTCRKKTGLEYAISTNSDIYVYDLNTKKTE 281

Query: 296 RLTN-TLFINISASYSPDSSQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASY 349
            +T      + +  YSPD   I ++S +R+G      +L++M     +++ +S+  E++ 
Sbjct: 282 NITEENKGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKTFESNV 341

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              VW     +I FT     +  I  +       + +           +  G  LI +++
Sbjct: 342 DAFVWGADAKVIYFTGVWHGESQIYALDLANDSVKAITSGMYDYEGV-ALFGDKLI-AKR 399

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                G ++YS+ L+G    L        D
Sbjct: 400 HSMSMGDEIYSVALDGSTTQLTQENKQIYD 429



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 95/280 (33%), Gaps = 67/280 (23%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISV------QKD 279
           T D     +V +  + I    KR+          I     S +GK+   +V      +  
Sbjct: 21  TKDAGKTDQVLIEKSDIKIEGKRMTPEALWAMGRIGGFAVSPDGKKIAYTVAYYSVPENK 80

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +++ ++   +  +++T+T +     ++    +++ F S+  G  QLY M  +GS +K
Sbjct: 81  SNREVFVMNADGSENQQITHTPYQENEVTWIKGGTKLAFLSNDNGSSQLYEMNPDGSGRK 140

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK----------------------------- 370
           +++ + +        SP G  + F      K                             
Sbjct: 141 QLT-NYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTDLMYKHWDEW 199

Query: 371 ----FAIGVMKKDGSQERLLVEDSNLQAPTWSPS--------------GRSLIFS-RKKD 411
                   V   DG+    +V+  N + P  SP                  + ++ RKK 
Sbjct: 200 VTTAPHPFVADFDGNGISNIVDILNDE-PYESPMKPWGGIEQLAWNMTSDKVAYTCRKKT 258

Query: 412 G-----DTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           G      T S +Y  DLN +    I      Y ++PQ+  
Sbjct: 259 GLEYAISTNSDIYVYDLNTKKTENITEENKGYDTNPQYSP 298



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 51/321 (15%), Positives = 108/321 (33%), Gaps = 69/321 (21%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG+  + +T +  Q      +     K+A+ + D+       +
Sbjct: 74  YSVPENKSNREVFVMNADGSENQQITHTPYQENEV-TWIKGGTKLAFLSNDNGSSQLYEM 132

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------------- 278
                 R  K++ N+   I     S +GK+ L   Q                        
Sbjct: 133 NPDGSGR--KQLTNYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTD 190

Query: 279 ----------DEAMDIYSVDLQSNATERLTNTLFINISA--------------SYSPDSS 314
                       A   +  D   N    + + L  N                 +++  S 
Sbjct: 191 LMYKHWDEWVTTAPHPFVADFDGNGISNIVDIL--NDEPYESPMKPWGGIEQLAWNMTSD 248

Query: 315 QIVFE-SDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++ +    + G          +YV   N    + I+++ +    +P +SP G  IA+   
Sbjct: 249 KVAYTCRKKTGLEYAISTNSDIYVYDLNTKKTENITEENKGYDTNPQYSPDGKYIAWQSM 308

Query: 367 SGEKFA-----IGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             + +      + +M  +  ++R + +   SN+ A  W    + + F+    G+  S++Y
Sbjct: 309 ERDGYEADLNRLFIMNLETGEKRFVSKTFESNVDAFVWGADAKVIYFTGVWHGE--SQIY 366

Query: 420 SIDLNGRNETLINTPAYASDP 440
           ++DL   +   I +  Y  + 
Sbjct: 367 ALDLANDSVKAITSGMYDYEG 387


>gi|75908325|ref|YP_322621.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75702050|gb|ABA21726.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 1552

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 87/241 (36%), Gaps = 30/241 (12%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAP 263
             P     +++  FSP+ Q VA A+ D    L         + A ++I  FR     + + 
Sbjct: 1113 FPGHQDCVWDVSFSPDGQYVATASSDGTARL--------WNLAGEQISRFRGHQDVVWSV 1164

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            RFS NGK    +   D    ++  +L     E+         S S+SPD   I   +  +
Sbjct: 1165 RFSPNGKYIA-TASSDRTARVW--NLNGQQLEQFPGHQDYVRSVSFSPDGKYIA-TASSD 1220

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               +L+ +        R     +++     +SP G  +           + +    G + 
Sbjct: 1221 RTVRLWYLNKQQFPPFR---GHQSTVRSIDFSPDGQQVVTASDDRT---VRLWSIQGEEL 1274

Query: 384  -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             + L     + + ++SP G+ +  +     D   +L+  D+ G+       P +     W
Sbjct: 1275 LQFLGHRGKVWSVSFSPDGKYIATTSS---DRTVRLW--DVTGQMLQQF--PGHQGT-VW 1326

Query: 443  V 443
             
Sbjct: 1327 S 1327



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 102/315 (32%), Gaps = 50/315 (15%)

Query: 115  RVIKEGKDRLRVEF------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V         +        RLW++   KQ+I  +            H   D I+ +   
Sbjct: 958  SVSFSPDGEYILTASDDCTARLWNL-QGKQLISLQ-----------GHE--DTIWSANFS 1003

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              G +            +     +  + +  G  +  +       +    FS + + +A 
Sbjct: 1004 PDGKYM----------ATASSDRTARLWNFRGQQLAKI-QGHQGYVRSVSFSSDGKYIAT 1052

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            ++ D    L  +       +   +    +  +    FS +GK    +   D  + ++  +
Sbjct: 1053 SSDDRTARLWNF-----SGQQLAQFSGHQGTVWCVSFSPDGKHIA-TAADDRIVRLW--N 1104

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            L+     R           S+SPD   +   +  +G  +L+     G    R  +  +  
Sbjct: 1105 LKGKLLVRFPGHQDCVWDVSFSPDGQYVA-TASSDGTARLW--NLAGEQISRF-RGHQDV 1160

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFS 407
             +   +SP G  IA            V   +G Q E+       +++ ++SP G+ +  +
Sbjct: 1161 VWSVRFSPNGKYIATASSDRTA---RVWNLNGQQLEQFPGHQDYVRSVSFSPDGKYIATA 1217

Query: 408  RKKDGDTGSKLYSID 422
                 D   +L+ ++
Sbjct: 1218 SS---DRTVRLWYLN 1229



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 73/217 (33%), Gaps = 22/217 (10%)

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + + +A   Y     L          +   +    +  + +  FS +G+  L +   D  
Sbjct: 920  DGRSLA--KYPATSPLLALQTILDNIQERNQFQGHQGWVRSVSFSPDGEYIL-TASDDCT 976

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-FESDREGKEQLYVMQSNGSDQKR 340
              ++  +LQ      L        SA++SPD   +    SDR  +    +    G    +
Sbjct: 977  ARLW--NLQGKQLISLQGHEDTIWSANFSPDGKYMATASSDRTAR----LWNFRGQQLAK 1030

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
            I Q  +       +S  G  IA T        +      G Q          +   ++SP
Sbjct: 1031 I-QGHQGYVRSVSFSSDGKYIA-TSSDDRTARLW--NFSGQQLAQFSGHQGTVWCVSFSP 1086

Query: 400  SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             G+ +  +     D   +L+++    + + L+  P +
Sbjct: 1087 DGKHIATAAD---DRIVRLWNL----KGKLLVRFPGH 1116



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 79/223 (35%), Gaps = 25/223 (11%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--- 259
             R         +    FSP+ + +  A+ D    L         +   K++ + +     
Sbjct: 945  ERNQFQGHQGWVRSVSFSPDGEYILTASDDCTARL--------WNLQGKQLISLQGHEDT 996

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            I +  FS +GK    +   D    ++  + +     ++        S S+S D   I   
Sbjct: 997  IWSANFSPDGKYMA-TASSDRTARLW--NFRGQQLAKIQGHQGYVRSVSFSSDGKYIATS 1053

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            SD +   +L+    +G    + S   + + +   +SP G  IA    + +   + +    
Sbjct: 1054 SD-DRTARLW--NFSGQQLAQFS-GHQGTVWCVSFSPDGKHIA---TAADDRIVRLWNLK 1106

Query: 380  GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            G          +     ++SP G+ +  +     D  ++L+++
Sbjct: 1107 GKLLVRFPGHQDCVWDVSFSPDGQYVATASS---DGTARLWNL 1146



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 61/383 (15%), Positives = 125/383 (32%), Gaps = 68/383 (17%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQV-------LVTGRVIKEGKDRLRVEF------ 128
            +S     Q +    S    + WN  G Q+        V   V      +           
Sbjct: 1123 VSFSPDGQYVATASSDGTARLWNLAGEQISRFRGHQDVVWSVRFSPNGKYIATASSDRTA 1182

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            R+W++  ++    ++F       R +  + S D  + I     D   R+ ++++      
Sbjct: 1183 RVWNLNGQQL---EQFPGHQDYVRSV--SFSPD-GKYIATASSDRTVRLWYLNKQQFPPF 1236

Query: 189  IKNSLCV----MDRDGANIRYLTPSRDQILFEP------------------RFSPNQQKV 226
              +   V       DG  +   +  R   L+                     FSP+ + +
Sbjct: 1237 RGHQSTVRSIDFSPDGQQVVTASDDRTVRLWSIQGEELLQFLGHRGKVWSVSFSPDGKYI 1296

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            A  + D      V L D    +  ++    +  + +  FS +G+    +   D    ++S
Sbjct: 1297 ATTSSDR----TVRLWDV-TGQMLQQFPGHQGTVWSVNFSPDGQHIA-TASSDLTARLWS 1350

Query: 287  VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            +D       R           S+S +   +   +D +   +L+     G    +     +
Sbjct: 1351 LD--GQELMRFKGHDKWVRYVSFSCNGEHLATAAD-DCTARLW--NLQGQQVGQFL-GHQ 1404

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGR 402
            ++ +   +SP    +       E     +   DG   ++L E    QAP     +S +G+
Sbjct: 1405 STVWSVNFSPDCQYLVTAS---EDHTAKLWTLDG---QILTEFRGHQAPLKSAVFSHNGQ 1458

Query: 403  SLIFSRKKDGDTGSKLYSIDLNG 425
             +  S     D   +L+  +LNG
Sbjct: 1459 YIATSSD---DRTVRLW--NLNG 1476



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/277 (16%), Positives = 82/277 (29%), Gaps = 49/277 (17%)

Query: 80   NLISQDSFKQKITNPDSIPRFQDWNSLGAQVL-VTG------RVIKEGKDRLRVE----- 127
              I      Q++         + W+  G ++L   G       V      +         
Sbjct: 1244 RSIDFSPDGQQVVTASDDRTVRLWSIQGEELLQFLGHRGKVWSVSFSPDGKYIATTSSDR 1303

Query: 128  -FRLWDVKDR--KQIIGKKFFS-----SPASWRKIAHTISDDIYQSITGEKGDFNSR--- 176
              RLWDV  +  +Q  G +        SP        T S D+   +    G    R   
Sbjct: 1304 TVRLWDVTGQMLQQFPGHQGTVWSVNFSPDGQHIA--TASSDLTARLWSLDGQELMRFKG 1361

Query: 177  ----ILFVSES-----VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                + +VS S     + +     +  + +  G  +          ++   FSP+ Q + 
Sbjct: 1362 HDKWVRYVSFSCNGEHLATAADDCTARLWNLQGQQVGQFL-GHQSTVWSVNFSPDCQYLV 1420

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSNGKRALISVQKDEAMDI 284
             A+ D                  + +  FR       +  FS NG+    +   D  + +
Sbjct: 1421 TASEDH--------TAKLWTLDGQILTEFRGHQAPLKSAVFSHNGQYIA-TSSDDRTVRL 1471

Query: 285  YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            +  +L      +         S S SPD   I   SD
Sbjct: 1472 W--NLNGQQIAQFKGHKGAVRSISISPDDQYIATASD 1506


>gi|255014962|ref|ZP_05287088.1| putative peptidase [Bacteroides sp. 2_1_7]
 gi|298376459|ref|ZP_06986414.1| prolyl oligopeptidase family protein [Bacteroides sp. 3_1_19]
 gi|298266337|gb|EFI07995.1| prolyl oligopeptidase family protein [Bacteroides sp. 3_1_19]
          Length = 703

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 54/308 (17%), Positives = 108/308 (35%), Gaps = 63/308 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           ++I F+     S    + L  M+ DG + + L+     I     FSP+++KV + +    
Sbjct: 119 TKIAFLCNESGS----SQLWEMNPDGTDRKRLSDYDKDIEGF-AFSPDEKKVLFISQVKT 173

Query: 232 ---------DDEDILRVYLMDTRIDRAPKRIGNFR------------------------- 257
                    D +    V + D       + +                             
Sbjct: 174 VNSTADKYPDLDKATGVIITDLMYKHWDEWVTTVPHPFVADFDGESISNPVDVMEGELFE 233

Query: 258 ------SMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLF 302
                   I    +++   +   + +K            DIY  DL +  T  +T     
Sbjct: 234 SPMKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKG 293

Query: 303 INISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + + +YSPD   I + S +R+G    + +L VM     ++  +S+D +++     WS  
Sbjct: 294 YDTNPTYSPDGKSIAWLSMERDGYEADQNRLMVMNLETGEKTFVSKDFDSNVDSYCWSAD 353

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            + I FT     +  +  +      +   + +      + +  G  LI +++     G +
Sbjct: 354 CERIYFTGVWHGESQVYQIDLANGNKITPLTEGMYDYASVALLGDKLI-AQRHSMSMGDE 412

Query: 418 LYSIDLNG 425
           +YSIDL G
Sbjct: 413 IYSIDLTG 420



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 87/247 (35%), Gaps = 61/247 (24%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S +GKR + +V      +     +++ ++   +  +++T T F    A +  
Sbjct: 57  GRIGGMNVSPDGKRVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTGFAENEAVWIK 116

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
             ++I F  +  G  QL+ M  +G+D+KR+S D +       +SP    + F        
Sbjct: 117 GGTKIAFLCNESGSSQLWEMNPDGTDRKRLS-DYDKDIEGFAFSPDEKKVLFISQVKTVN 175

Query: 367 -SGEKF---------------------------AIGVMKKDG---SQERLLVEDSNLQAP 395
            + +K+                              V   DG   S    ++E    ++P
Sbjct: 176 STADKYPDLDKATGVIITDLMYKHWDEWVTTVPHPFVADFDGESISNPVDVMEGELFESP 235

Query: 396 ----------TWSPSGRSLIFSRKKDGD------TGSKLYSIDLNGRNETLIN--TPAYA 437
                      W+ +   + ++ +K         T S +Y  DLN +  T I      Y 
Sbjct: 236 MKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKGYD 295

Query: 438 SDPQWVG 444
           ++P +  
Sbjct: 296 TNPTYSP 302



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 57/322 (17%), Positives = 113/322 (35%), Gaps = 67/322 (20%)

Query: 176 RILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           R+++     SV        + VM+ DG++ + +T +      E  +     K+A+   + 
Sbjct: 70  RVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTG-FAENEAVWIKGGTKIAFLCNES 128

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------------DE 280
                  +     DR  KR+ ++   I    FS + K+ L   Q              D+
Sbjct: 129 GSSQLWEMNPDGTDR--KRLSDYDKDIEGFAFSPDEKKVLFISQVKTVNSTADKYPDLDK 186

Query: 281 AMDIYSVDLQSNAT-ERLTNTLF--------------INI-------SA----------S 308
           A  +   DL      E +T                  +++       S           +
Sbjct: 187 ATGVIITDLMYKHWDEWVTTVPHPFVADFDGESISNPVDVMEGELFESPMKPFGGIEQLA 246

Query: 309 YSPDSSQIVFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           ++  S +I + S +             +YV   N      I+++ +    +P +SP G  
Sbjct: 247 WNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKGYDTNPTYSPDGKS 306

Query: 361 IAFTKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGD 413
           IA+     + +      + VM  +  ++  + +  DSN+ +  WS     + F+    G+
Sbjct: 307 IAWLSMERDGYEADQNRLMVMNLETGEKTFVSKDFDSNVDSYCWSADCERIYFTGVWHGE 366

Query: 414 TGSKLYSIDLNGRNETLINTPA 435
             S++Y IDL   N+    T  
Sbjct: 367 --SQVYQIDLANGNKITPLTEG 386



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 88/274 (32%), Gaps = 61/274 (22%)

Query: 220 SPNQQKV----AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ ++V    AY +  +    R   +        K+I           +   G +    
Sbjct: 65  SPDGKRVVYTVAYYSVPENKSNREVFVMNADGSDNKQITKTGFAENEAVWIKGGTKIAFL 124

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------------- 321
             +  +  ++ ++      +RL++        ++SPD  +++F S               
Sbjct: 125 CNESGSSQLWEMNPDGTDRKRLSDYDKDIEGFAFSPDEKKVLFISQVKTVNSTADKYPDL 184

Query: 322 -------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDP---------- 352
                                     +V   +G          E   F+           
Sbjct: 185 DKATGVIITDLMYKHWDEWVTTVPHPFVADFDGESISNPVDVMEGELFESPMKPFGGIEQ 244

Query: 353 -VWSPQGDLIAFTKF--SGEKF------AIGVMKKDGSQERLLVED--SNLQAPTWSPSG 401
             W+   D IA+T    +G+++       I V   +  Q   + E+       PT+SP G
Sbjct: 245 LAWNTTSDKIAYTSRKKTGKEYAISTNSDIYVYDLNTKQTTNITEENKGYDTNPTYSPDG 304

Query: 402 RSLIFSR-KKDGDTGSK--LYSIDLNGRNETLIN 432
           +S+ +   ++DG    +  L  ++L    +T ++
Sbjct: 305 KSIAWLSMERDGYEADQNRLMVMNLETGEKTFVS 338



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 69/219 (31%), Gaps = 26/219 (11%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEP-----------RFSPNQQKVAYAT-------YDDED 235
            V D DG +I       +  LFE             ++    K+AY +       Y    
Sbjct: 211 FVADFDGESISNPVDVMEGELFESPMKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYAIST 270

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEA----MDIYSVDLQ 290
              +Y+ D    +        +     P +S +GK     S+++D        +  ++L+
Sbjct: 271 NSDIYVYDLNTKQTTNITEENKGYDTNPTYSPDGKSIAWLSMERDGYEADQNRLMVMNLE 330

Query: 291 SNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +     ++     N+ +  +S D  +I F     G+ Q+Y +     ++     +    Y
Sbjct: 331 TGEKTFVSKDFDSNVDSYCWSADCERIYFTGVWHGESQVYQIDLANGNKITPLTEGMYDY 390

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLV 387
                     LIA          I  +   G      L 
Sbjct: 391 ASVALLGD-KLIAQRHSMSMGDEIYSIDLTGDHTVTQLT 428


>gi|116623034|ref|YP_825190.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226196|gb|ABJ84905.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 866

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 80/227 (35%), Gaps = 17/227 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +   + Y   +      +  +D +   A +  G        PR S +G++  ++   D
Sbjct: 577 SRSAGTLVYVQAEAPPPSTLVWVDRK--GAEESAGPAPRDYSTPRVSPDGRKLAVAADSD 634

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               I+  D+      R+T +   N S  ++PD  +I + +      ++     +GS   
Sbjct: 635 ----IWVYDIPRGTLTRITFS-GDNRSPVWTPDGKRITYVA----NGKISWSLLDGSAHA 685

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQER--LLVEDSNLQAPT 396
               +  A      W+P G  + FT+        + ++  +G ++   +L          
Sbjct: 686 ETLWNG-AFGLPTSWAPDGKRLLFTQLGTSNHTDVSILSVEGERKVSPILQSRFRAGQAA 744

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           +SP GR + ++  +       +      G    + +      DP W 
Sbjct: 745 FSPDGRRMAYTSDESARPEIYVQEFPGPGGKVQVSSQGGL--DPVWG 789



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 79/216 (36%), Gaps = 18/216 (8%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PR SP+ +K+A A   D     +++ D       +    F     +P ++ +GKR     
Sbjct: 618 PRVSPDGRKLAVAADSD-----IWVYDIPRGTLTRI--TFSGDNRSPVWTPDGKRITYVA 670

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNG 335
             +  +    +D  ++A         +  S  ++PD  +++F          + ++   G
Sbjct: 671 --NGKISWSLLDGSAHAETLWNGAFGLPTS--WAPDGKRLLFTQLGTSNHTDVSILSVEG 726

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
             +               +SP G  +A+T     +  I V +  G   ++ V       P
Sbjct: 727 ERKVSPILQSRFRAGQAAFSPDGRRMAYTSDESARPEIYVQEFPGPGGKVQVSSQGGLDP 786

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            W   GR L +       +G K+ ++D+      ++
Sbjct: 787 VWGRQGRELFY------RSGGKMMAVDIEAGTARVL 816



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 91/238 (38%), Gaps = 20/238 (8%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           D+++  +      ++    + + V D     +  +T S D     P ++P+ +++ Y   
Sbjct: 614 DYSTPRVSPDGRKLAVAADSDIWVYDIPRGTLTRITFSGDN--RSPVWTPDGKRITYVAN 671

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALIS-VQKDEAMDIYSVDL 289
                 ++           + + N       P  ++ +GKR L + +      D+  + +
Sbjct: 672 G-----KISWSLLDGSAHAETLWN--GAFGLPTSWAPDGKRLLFTQLGTSNHTDVSILSV 724

Query: 290 QS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEA 347
           +       +  + F    A++SPD  ++ + SD   + ++YV +  G   + ++S     
Sbjct: 725 EGERKVSPILQSRFRAGQAAFSPDGRRMAYTSDESARPEIYVQEFPGPGGKVQVSSQGG- 783

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              DPVW  QG  + +   SG K     +  +    R+L E         S  G+  +
Sbjct: 784 --LDPVWGRQGRELFY--RSGGKM--MAVDIEAGTARVLFEARYNGGYDVSADGQRFL 835



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/200 (11%), Positives = 62/200 (31%), Gaps = 10/200 (5%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            GD  S +       ++ +    +     DG+     T           ++P+ +++ + 
Sbjct: 651 SGDNRSPVWTPDGKRITYVANGKISWSLLDGS-AHAETLWNGAFGLPTSWAPDGKRLLFT 709

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                +   V ++    +R    I   R       FS +G+R   +  +    +IY  + 
Sbjct: 710 QLGTSNHTDVSILSVEGERKVSPILQSRFRAGQAAFSPDGRRMAYTSDESARPEIYVQEF 769

Query: 290 QS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  ++++   ++    +     ++ + S      ++  +       + + + +   
Sbjct: 770 PGPGGKVQVSSQGGLD--PVWGRQGRELFYRS----GGKMMAVDIEAGTARVLFEARYN- 822

Query: 349 YFDPVWSPQGDLIAFTKFSG 368
                 S  G      K  G
Sbjct: 823 -GGYDVSADGQRFLMVKSGG 841



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 64/240 (26%), Gaps = 58/240 (24%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--------RLTNTLFIN 304
           +      + AP+   +GK  L+SV  DE   I    L +            R+ N+    
Sbjct: 472 LSKGERGLGAPQLLPDGKSLLLSVSTDEGTQIAVQRLATGERHILVKGDDPRVRNSAARY 531

Query: 305 ISAS--YSPDSSQIV---------------------------FESDREGKEQLYV----- 330
            +    YS   S +                            F   R     +YV     
Sbjct: 532 AAGFLFYSQADSLMAAPFNPERLELTGPPLPIARGAGQIGPQFGLSRSAGTLVYVQAEAP 591

Query: 331 -----MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                +  +    +  +      Y  P  SP G  +A    S     I V          
Sbjct: 592 PPSTLVWVDRKGAEESAGPAPRDYSTPRVSPDGRKLAVAADSD----IWVYDIPRGTLTR 647

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
           +    + ++P W+P G+ + +     G     L    L+G              P  W  
Sbjct: 648 ITFSGDNRSPVWTPDGKRITYVAN--GKISWSL----LDGSAHAETLWNGAFGLPTSWAP 701



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 59/174 (33%), Gaps = 17/174 (9%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK       ++ +  ++   + S  T  L  T   + +  +SPD   + F    +
Sbjct: 355 AVSPDGKFLAYIGLREGSRQLFFRAMDSLETTALPGTEGASDTVFFSPDGLWVGFL---Q 411

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G+  +    S G        + +       W   G  I F +  G    I  +   G   
Sbjct: 412 GRPNVLKKISIGGGLPVTVANTQGC--GGDWGADGQ-IRFGRLDG----IFQVPAGGGAV 464

Query: 384 RLLVED------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           + L+          L AP   P G+SL+ S   D  T   +  +   G    L+
Sbjct: 465 KTLIATDLSKGERGLGAPQLLPDGKSLLLSVSTDEGTQIAVQRL-ATGERHILV 517



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 52/179 (29%), Gaps = 17/179 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + +AY    +    R              +           FS +G    +   
Sbjct: 355 AVSPDGKFLAYIGLREGS--RQLFFRAMDSLETTALPGTEGASDTVFFSPDG--LWVGFL 410

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQSNGS 336
           +     +  + +       + NT        +  D         R G+ + ++ + + G 
Sbjct: 411 QGRPNVLKKISIGGGLPVTVANTQG--CGGDWGADGQI------RFGRLDGIFQVPAGGG 462

Query: 337 DQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             K +        E     P   P G  +  +  + E   I V +    +  +LV+  +
Sbjct: 463 AVKTLIATDLSKGERGLGAPQLLPDGKSLLLSVSTDEGTQIAVQRLATGERHILVKGDD 521



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 51/177 (28%), Gaps = 19/177 (10%)

Query: 279 DEAMDIYSVDLQSNATERLTN--------TLFINISASYSPDSSQIVFESDREGKEQLYV 330
              +        + +  RLT                 + SPD   + +   REG  QL+ 
Sbjct: 318 GGYVQRRIGSSSAGSLTRLTALLPPAHRFATGSCTDLAVSPDGKFLAYIGLREGSRQLFF 377

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
              +  +   +    E +     +SP G  + F    G    +  +   G     +    
Sbjct: 378 RAMDSLETTAL-PGTEGASDTVFFSPDGLWVGF--LQGRPNVLKKISIGGGLPVTVANTQ 434

Query: 391 NLQAPTWSPSGR------SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                 W   G+        IF     G     L + DL+ + E  +  P    D +
Sbjct: 435 GCGG-DWGADGQIRFGRLDGIFQVPAGGGAVKTLIATDLS-KGERGLGAPQLLPDGK 489



 Score = 40.0 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 39/131 (29%), Gaps = 15/131 (11%)

Query: 323 EGKEQLYVMQSNGSDQKRIS-------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            G  Q  +  S+     R++       +    S  D   SP G  +A+         +  
Sbjct: 318 GGYVQRRIGSSSAGSLTRLTALLPPAHRFATGSCTDLAVSPDGKFLAYIGLREGSRQLFF 377

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINT 433
              D  +   L           +SP G  + F + +       L  I + G    T+ NT
Sbjct: 378 RAMDSLETTALPGTEGASDTVFFSPDGLWVGFLQGRPN----VLKKISIGGGLPVTVANT 433

Query: 434 PAYASDPQWVG 444
                D  W  
Sbjct: 434 QGCGGD--WGA 442


>gi|299138847|ref|ZP_07032024.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
 gi|298599001|gb|EFI55162.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
          Length = 689

 Score = 95.1 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 95/273 (34%), Gaps = 45/273 (16%)

Query: 212 QILFEPRFSPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           + +  P  SP+ Q VAY      +  ++  +  +++         + +   +  +P +S 
Sbjct: 37  RYVGSPALSPDGQYVAYEIEHPDWQSDNYAQELVVENLKTGKRAPVPSLEGVPGSPEWSP 96

Query: 268 NGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-------- 318
           +G+        K     I+ V  + +   +++ +        +S DS  I F        
Sbjct: 97  DGRWLAFVEHPKQGVGQIWIVPAEGSVAWQVSKSATDVGLFHWSADSKHIAFLTTQRDHA 156

Query: 319 ---ESDREGK----------EQLYVMQSNGSD-------QKRISQDKEASYFDPVWSPQG 358
               ++R G            QL+ +    +         + +      S  D  WSP  
Sbjct: 157 VNGRAERFGSFEVVGKDYQQTQLWSVDLEAASGHIAAQVPRVLVSSPAFSIADFSWSPDS 216

Query: 359 DLIAFTK------FSGEKFAIGVMKKD-GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKK 410
            +IAFT        +     I ++ +  G++ R +V   S   +P +SP G+ + F    
Sbjct: 217 TMIAFTAAGTPLLTAYSSQDIYLLDRTKGNEVRKIVGLPSPDFSPIFSPDGKKIAFLTWL 276

Query: 411 DGD----TGSKLYSIDLNGRNETLINTPAYASD 439
                  +   + ++D+    +  +   A   D
Sbjct: 277 GQRDFFYSNVHIVTVDVEDAWQRPVTAAAAVRD 309



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 112/283 (39%), Gaps = 57/283 (20%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R   PS + +   P +SP+ + +A+  +  + + +++++      A + +    + +   
Sbjct: 79  RAPVPSLEGVPGSPEWSPDGRWLAFVEHPKQGVGQIWIVPAEGSVAWQ-VSKSATDVGLF 137

Query: 264 RFSSNGKRALI-SVQKD--------------------EAMDIYSVDLQSNA-------TE 295
            +S++ K     + Q+D                    +   ++SVDL++ +         
Sbjct: 138 HWSADSKHIAFLTTQRDHAVNGRAERFGSFEVVGKDYQQTQLWSVDLEAASGHIAAQVPR 197

Query: 296 RLTNTLFIN-ISASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEAS 348
            L ++   +    S+SPDS+ I F +           + +Y++     ++ R      + 
Sbjct: 198 VLVSSPAFSIADFSWSPDSTMIAFTAAGTPLLTAYSSQDIYLLDRTKGNEVRKIVGLPSP 257

Query: 349 YFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLV--------EDSNLQA 394
            F P++SP G  IAF  + G          I  +  + + +R +              + 
Sbjct: 258 DFSPIFSPDGKKIAFLTWLGQRDFFYSNVHIVTVDVEDAWQRPVTAAAAVRDVTARFDEN 317

Query: 395 PT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           P+   WS  G SL FS ++   T + L+ ID +G + T I + 
Sbjct: 318 PSLLGWS--GNSLYFSAEQ--KTSTHLFRIDSDGNHLTRITSG 356



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 77/228 (33%), Gaps = 44/228 (19%)

Query: 260 ILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           + +P  S +G+     +        + A ++   +L++     + +   +  S  +SPD 
Sbjct: 39  VGSPALSPDGQYVAYEIEHPDWQSDNYAQELVVENLKTGKRAPVPSLEGVPGSPEWSPDG 98

Query: 314 SQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--------T 364
             + F    ++G  Q++++ + GS   ++S+          WS     IAF         
Sbjct: 99  RWLAFVEHPKQGVGQIWIVPAEGSVAWQVSK-SATDVGLFHWSADSKHIAFLTTQRDHAV 157

Query: 365 KFSGEKF-------------AIGVMKKDGSQ-------ERLLVEDSNLQ--APTWSPSGR 402
               E+F              +  +  + +         R+LV          +WSP   
Sbjct: 158 NGRAERFGSFEVVGKDYQQTQLWSVDLEAASGHIAAQVPRVLVSSPAFSIADFSWSPDST 217

Query: 403 SLIFSRKK----DGDTGSKLYSIDLNGRNE--TLINTPAYASDPQWVG 444
            + F+          +   +Y +D    NE   ++  P+    P +  
Sbjct: 218 MIAFTAAGTPLLTAYSSQDIYLLDRTKGNEVRKIVGLPSPDFSPIFSP 265



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 78/232 (33%), Gaps = 27/232 (11%)

Query: 184 VVSGIIKNSLCVMDRDGAN-------IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-- 234
           V     +  L  +D + A+        R L  S    + +  +SP+   +A+        
Sbjct: 170 VGKDYQQTQLWSVDLEAASGHIAAQVPRVLVSSPAFSIADFSWSPDSTMIAFTAAGTPLL 229

Query: 235 ---DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY------ 285
                  +YL+D       ++I    S   +P FS +GK+        +    Y      
Sbjct: 230 TAYSSQDIYLLDRTKGNEVRKIVGLPSPDFSPIFSPDGKKIAFLTWLGQRDFFYSNVHIV 289

Query: 286 SVDLQSNATERLTNTLFI-NISASYSPD-------SSQIVFESDREGKEQLYVMQSNGSD 337
           +VD++      +T    + +++A +  +        + + F ++++    L+ + S+G+ 
Sbjct: 290 TVDVEDAWQRPVTAAAAVRDVTARFDENPSLLGWSGNSLYFSAEQKTSTHLFRIDSDGNH 349

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVE 388
             RI+           +S     +A           + V        R +  
Sbjct: 350 LTRITSGDNFVLDSASFSHNFTAVALVAEDAFHMPELYVSDLAPLALRQVTH 401



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 77/201 (38%), Gaps = 20/201 (9%)

Query: 174 NSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           ++ I F +      +      + ++DR   N            F P FSP+ +K+A+ T+
Sbjct: 216 STMIAFTAAGTPLLTAYSSQDIYLLDRTKGNEVRKIVGLPSPDFSPIFSPDGKKIAFLTW 275

Query: 232 DDEDIL---RVYLMDTRIDRAPKRIGNFRSMILAPR-----------FSSNGKRALISVQ 277
             +       V+++   ++ A +R     + +               +S  G     S +
Sbjct: 276 LGQRDFFYSNVHIVTVDVEDAWQRPVTAAAAVRDVTARFDENPSLLGWS--GNSLYFSAE 333

Query: 278 KDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFES-DREGKEQLYVMQSNG 335
           +  +  ++ +D   N   R+T+   F+  SAS+S + + +   + D     +LYV     
Sbjct: 334 QKTSTHLFRIDSDGNHLTRITSGDNFVLDSASFSHNFTAVALVAEDAFHMPELYVSDLAP 393

Query: 336 SDQKRISQDKEASYFDPVWSP 356
              ++++   +      + +P
Sbjct: 394 LALRQVTHFTDQVRGWRLGTP 414


>gi|229495569|ref|ZP_04389302.1| prolyl oligopeptidase family protein [Porphyromonas endodontalis
           ATCC 35406]
 gi|229317552|gb|EEN83452.1| prolyl oligopeptidase family protein [Porphyromonas endodontalis
           ATCC 35406]
          Length = 691

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 105/313 (33%), Gaps = 65/313 (20%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            S+     K  L  ++ DG+  + LT    +    PR+  + +++AY T  + ++  V +
Sbjct: 68  PSIQDNKAKTQLFFVNSDGSGRKALTDGT-RTAVSPRWIEDGKRIAYLTVIEGEMQLVSI 126

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------KDEAMDIYSVD------ 288
           +    D+  +++      I    +S +GK+ + +         KD   D+  +       
Sbjct: 127 LPDGTDQ--RQVTRIPGGITGYLYSQDGKQLVYTADIKLPNEAKDRNPDLDKISGRVITD 184

Query: 289 -----------------LQSNATERLTNTL---------------FINISASYSPDSSQI 316
                            + S A + +T                        + +PD   I
Sbjct: 185 LMYKHWDEWVETAPHTFVASLAQQPITQGKDLLEGELFEAPMKPHSDESDIAITPDGKGI 244

Query: 317 VFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            + S +             +Y           +++        P +SP G  + +     
Sbjct: 245 AYASRKKTGLEYSISTNSDIYYYDLTTGTTTNLTEGMMGYDTHPSFSPDGKYMTWCSMER 304

Query: 369 EKFA-----IGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +      + ++ +   ++  L E    N++ PTWS  G+S+ F    + +  S LY +
Sbjct: 305 DGYESDLIRLFLLDRTTGEKTYLTEGFEYNVEQPTWSQDGKSIYFIACVEAE--SHLYEL 362

Query: 422 DLNGRNETLINTP 434
            L  +    I   
Sbjct: 363 TLKNKKIRRITQG 375



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 84/287 (29%), Gaps = 63/287 (21%)

Query: 220 SPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SPN ++V Y+    +  D                 K + +     ++PR+  +GKR    
Sbjct: 55  SPNGKQVVYSVSLPSIQDNKAKTQLFFVNSDGSGRKALTDGTRTAVSPRWIEDGKRIAYL 114

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------REGKEQL 328
              +  M + S+        ++T          YS D  Q+V+ +D       ++    L
Sbjct: 115 TVIEGEMQLVSILPDGTDQRQVTRIPGGITGYLYSQDGKQLVYTADIKLPNEAKDRNPDL 174

Query: 329 YVMQ-----------------------SNGSDQKRISQDKE--------------ASYFD 351
             +                             Q+ I+Q K+              +   D
Sbjct: 175 DKISGRVITDLMYKHWDEWVETAPHTFVASLAQQPITQGKDLLEGELFEAPMKPHSDESD 234

Query: 352 PVWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSG 401
              +P G  IA+                 I            L E        P++SP G
Sbjct: 235 IAITPDGKGIAYASRKKTGLEYSISTNSDIYYYDLTTGTTTNLTEGMMGYDTHPSFSPDG 294

Query: 402 RSLIFSR-KKDGDTG--SKLYSIDLNGRNETLINTP--AYASDPQWV 443
           + + +   ++DG      +L+ +D     +T +          P W 
Sbjct: 295 KYMTWCSMERDGYESDLIRLFLLDRTTGEKTYLTEGFEYNVEQPTWS 341



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 72/183 (39%), Gaps = 16/183 (8%)

Query: 264 RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSS 314
             + +GK    + +K            DIY  DL +  T  LT  +   +   S+SPD  
Sbjct: 236 AITPDGKGIAYASRKKTGLEYSISTNSDIYYYDLTTGTTTNLTEGMMGYDTHPSFSPDGK 295

Query: 315 QIVFES-DREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            + + S +R+G E    +L+++     ++  +++  E +   P WS  G  I F      
Sbjct: 296 YMTWCSMERDGYESDLIRLFLLDRTTGEKTYLTEGFEYNVEQPTWSQDGKSIYFIACVEA 355

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +  +  +     + R +     +    +   G +L+ + ++     + LY IDL     T
Sbjct: 356 ESHLYELTLKNKKIRRIT-QGQMDYVGFDLQGTTLV-AARQSMLAPTDLYRIDLKKGTAT 413

Query: 430 LIN 432
            I 
Sbjct: 414 AIT 416



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 85/241 (35%), Gaps = 61/241 (25%)

Query: 264 RFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             S NGK+ + SV      D      ++ V+   +  + LT+     +S  +  D  +I 
Sbjct: 53  SLSPNGKQVVYSVSLPSIQDNKAKTQLFFVNSDGSGRKALTDGTRTAVSPRWIEDGKRIA 112

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------------- 364
           + +  EG+ QL  +  +G+DQ+++++         ++S  G  + +T             
Sbjct: 113 YLTVIEGEMQLVSILPDGTDQRQVTRI-PGGITGYLYSQDGKQLVYTADIKLPNEAKDRN 171

Query: 365 -----------------------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------ 395
                                  + +   F   + ++  +Q + L+E    +AP      
Sbjct: 172 PDLDKISGRVITDLMYKHWDEWVETAPHTFVASLAQQPITQGKDLLEGELFEAPMKPHSD 231

Query: 396 ----TWSPSGRSLIFSRKKDGD------TGSKLYSIDLNGRNETLINTP--AYASDPQWV 443
                 +P G+ + ++ +K         T S +Y  DL     T +      Y + P + 
Sbjct: 232 ESDIAITPDGKGIAYASRKKTGLEYSISTNSDIYYYDLTTGTTTNLTEGMMGYDTHPSFS 291

Query: 444 G 444
            
Sbjct: 292 P 292



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 52/142 (36%), Gaps = 7/142 (4%)

Query: 212 QILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                P FSP+ + + + + +      D++R++L+D            F   +  P +S 
Sbjct: 283 GYDTHPSFSPDGKYMTWCSMERDGYESDLIRLFLLDRTTGEKTYLTEGFEYNVEQPTWSQ 342

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE- 326
           +GK        +    +Y + L++    R+T      +   +    + +V          
Sbjct: 343 DGKSIYFIACVEAESHLYELTLKNKKIRRITQGQMDYVG--FDLQGTTLVAARQSMLAPT 400

Query: 327 QLYVMQSNGSDQKRISQDKEAS 348
            LY +         I+++ E++
Sbjct: 401 DLYRIDLKKGTATAITKENEST 422



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 9/93 (9%)

Query: 347 ASYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSP 399
           A       SP G  + ++      + +  K  +  +  DGS  + L +      +P W  
Sbjct: 47  ARIGGFSLSPNGKQVVYSVSLPSIQDNKAKTQLFFVNSDGSGRKALTDGTRTAVSPRWIE 106

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            G+ + +    +G+   +L SI  +G ++  + 
Sbjct: 107 DGKRIAYLTVIEGEM--QLVSILPDGTDQRQVT 137


>gi|194578718|dbj|BAG66045.1| putative protease [Shewanella violacea]
          Length = 1115

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 116/302 (38%), Gaps = 46/302 (15%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---- 228
           +++R+ F+S+S  +      +  M   G + +  T   D  +   R   +  ++ +    
Sbjct: 246 WDNRLYFISDSDGNDN----IWSMTLAGKDFKQHTQFTDWQVRGARI--DNGRIVFQQGA 299

Query: 229 ------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----- 277
                    +    L + L+     R    + +      + R S +G + +I+ +     
Sbjct: 300 DIKLYDIAANSSHTLDIKLVSDFPQRREHWVNDPMKYATSTRLSPSGNKVVITARSHVAV 359

Query: 278 -KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              +   +  + L  N+  R         +A  SPD   +   SD  G+++++   ++G 
Sbjct: 360 AGTDGSRLVEIALPGNSRIR---------NAVMSPDGKWVYGISDASGEQEIWRFPADGG 410

Query: 337 D-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +  K+++ +          SP G  IA   + G    I ++    ++ + ++       P
Sbjct: 411 NGAKQLTDNGHTLRMSLSVSPDGRYIASDDYDG---NIWLLDLRNNRHKKIITRGEGLGP 467

Query: 396 ----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLIN------TPAYASDPQWVG 444
                WS   R +  ++ + G +  K+    L   R ETL +      +PA+++D  W+ 
Sbjct: 468 YADIVWSGDSRFMALTKSEIGKSRPKIVLYSLAKQRAETLTSDKYESYSPAFSTDGNWLY 527

Query: 445 FM 446
           F+
Sbjct: 528 FL 529



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 72/223 (32%), Gaps = 15/223 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
               +      +     R SP+  KV            V +  T   R  +      S I
Sbjct: 324 QRREHWVNDPMKYATSTRLSPSGNKVVITARSH-----VAVAGTDGSRLVEIALPGNSRI 378

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLT-NTLFINISASYSPDSSQIVF 318
                S +GK            +I+          ++LT N   + +S S SPD   I  
Sbjct: 379 RNAVMSPDGKWVYGISDASGEQEIWRFPADGGNGAKQLTDNGHTLRMSLSVSPDGRYIA- 437

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTK--FSGEKFAIG 374
             D +G   ++++    +  K+I    E    Y D VWS     +A TK      +  I 
Sbjct: 438 SDDYDGN--IWLLDLRNNRHKKIITRGEGLGPYADIVWSGDSRFMALTKSEIGKSRPKIV 495

Query: 375 VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           +      +   L  D     +P +S  G  L F   +  ++  
Sbjct: 496 LYSLAKQRAETLTSDKYESYSPAFSTDGNWLYFLSDRQFNSTP 538



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 67/193 (34%), Gaps = 22/193 (11%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +R+ +  +  L    S +G         + + ++Y + +     +R++          ++
Sbjct: 83  QRLTSLPAQELGASVSKDGNWVAYVANYEGSSEVYVIPITGGQAKRISFENSRVRVQGWT 142

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
            D   +    +  G    +V++S   +         A   +     +G+ + FT+F    
Sbjct: 143 ADGQVLYGTDNALGPANYWVLRSVNPETLETQDLPLADAIEGTIDDKGEYLYFTRFGLQA 202

Query: 367 ---------SGEKFAIGVMKKDGSQE-RLLVED--SNLQAPT-WSPSGRSLIFSRKKDGD 413
                     G K  +   K     E + L  D   +++ P  W    R L F    DG 
Sbjct: 203 TGDNAKVYRGGAKGELWRFKLGSKVEAQRLTSDHTGSVRQPMLW--DNR-LYFISDSDG- 258

Query: 414 TGSKLYSIDLNGR 426
               ++S+ L G+
Sbjct: 259 -NDNIWSMTLAGK 270


>gi|85680311|gb|ABC72341.1| basic membrane protein [uncultured haloarchaeon]
          Length = 629

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 99/259 (38%), Gaps = 10/259 (3%)

Query: 188 IIKNSLCVMDRD-GANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTR 245
             +N L V++ D G   ++      +    P  ++ +   V +   D+    +  +    
Sbjct: 39  TGRNELHVLNVDSGEVSQWSEGEVPRNARWPINWAADGDSVFF-HLDNNGNEQNDIYRIS 97

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            D   +        +       +G   ++   +D  M++Y  DL S  T +LT       
Sbjct: 98  RDGKTEATIEMDGQVAINDIGEDGDTLIVGSSRDGQMNLYYHDLPSGETTKLTEYERAAA 157

Query: 306 SASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLI 361
               SP+  +I +    SD    + +YV   +GS  + ++     +   P  W P G+ +
Sbjct: 158 GGILSPECDRIAYATNESDDFDNQDVYVADIDGSTPQNLNLGDTGAEASPADWGPDGERL 217

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYS 420
             +  S +   +GV   D  +   L  D+  ++P  + P G  ++  R ++ ++   +Y+
Sbjct: 218 LISDNSPDLGRLGVYHFDSEEVTWLENDAFEESPKAFLPDGERVLGYRSREAESVPIIYN 277

Query: 421 IDLNGRNETLINTPAYASD 439
           I+      T  + P   + 
Sbjct: 278 IET--GEATEFDLPGGVAS 294



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 83/246 (33%), Gaps = 19/246 (7%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGK 270
             L  P  SP+  ++A+            L     + +    G        P  ++++G 
Sbjct: 18  PTLAHPTVSPDGDQIAFYYDITGRNELHVLNVDSGEVSQWSEGEVPRNARWPINWAADGD 77

Query: 271 RALISVQKDEA--MDIYSVDLQSNATERL-TNTL-FINISASYSPDSSQIVFESDREGKE 326
                +  +     DIY +         +  +    IN       D   ++  S R+G+ 
Sbjct: 78  SVFFHLDNNGNEQNDIYRISRDGKTEATIEMDGQVAIND---IGEDGDTLIVGSSRDGQM 134

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQE 383
            LY       +  +++ + E +    + SP+ D IA+     + F    + V   DGS  
Sbjct: 135 NLYYHDLPSGETTKLT-EYERAAAGGILSPECDRIAYATNESDDFDNQDVYVADIDGSTP 193

Query: 384 RLLV--EDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + L   +     +P  W P G  L+ S          +Y  D      T +   A+   P
Sbjct: 194 QNLNLGDTGAEASPADWGPDGERLLISDNSPDLGRLGVYHFDS--EEVTWLENDAFEESP 251

Query: 441 QWVGFM 446
           +   F+
Sbjct: 252 K--AFL 255



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 55/173 (31%), Gaps = 4/173 (2%)

Query: 220 SPNQQKVAYATYDDEDI--LRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISV 276
           SP   ++AYAT + +D     VY+ D                  +P  +  +G+R LIS 
Sbjct: 162 SPECDRIAYATNESDDFDNQDVYVADIDGSTPQNLNLGDTGAEASPADWGPDGERLLISD 221

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              +   +      S     L N  F     ++ PD  +++    RE +    +      
Sbjct: 222 NSPDLGRLGVYHFDSEEVTWLENDAFEESPKAFLPDGERVLGYRSREAESVPIIYNIETG 281

Query: 337 DQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +          AS+          ++       ++  + V          LVE
Sbjct: 282 EATEFDLPGGVASFGTEAIIDDTRVLLTHTTPTQRPELLVYNLKTHDHETLVE 334


>gi|153868991|ref|ZP_01998702.1| WD-40 repeat protein [Beggiatoa sp. PS]
 gi|152074458|gb|EDN71311.1| WD-40 repeat protein [Beggiatoa sp. PS]
          Length = 1400

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 99/254 (38%), Gaps = 23/254 (9%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           +++ +       +    FSP+ Q +A A+ D    +R++ +DTR     + +      + 
Sbjct: 685 HLKTILYRHSFGITSVAFSPDGQTLALASKD--GTVRLWDVDTRT-PLGEPLTGHFYWVN 741

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-------LFINISASYSPDSS 314
           +  FS +G + L S  +D  + +++VD ++   E LT          FI  S ++SPD  
Sbjct: 742 SVAFSPDG-QILASASQDGIVRLWNVDTRTPLGEPLTGHFDIFGGLPFIVDSIAFSPDGQ 800

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +      +   +L+ M +     + ++           +SP G ++A          + 
Sbjct: 801 ILA-SGGMDNTVRLWDMDTRTPLGEPLT-GHSHYVSSVAFSPDGQILASASLDKT---VR 855

Query: 375 VMKKDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETL 430
           +   D      E L     ++ +  +SP G+ L  +     D   +L+++       ETL
Sbjct: 856 LWDVDTRTPLGEPLTGHSGDVSSVAFSPDGQILASASD---DNTVRLWNVATRTPLGETL 912

Query: 431 INTPAYASDPQWVG 444
                + +   +  
Sbjct: 913 TGHSDWVNSVAFSP 926



 Score = 90.8 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 107/325 (32%), Gaps = 48/325 (14%)

Query: 113  TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
               V      ++          RLWDV D +  +G+           +A +    I   +
Sbjct: 833  VSSVAFSPDGQILASASLDKTVRLWDV-DTRTPLGEPLTGHSGDVSSVAFSPDGQI---L 888

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                 D   R+  V+     G                          +    FSP+ Q +
Sbjct: 889  ASASDDNTVRLWNVATRTPLGE-----------------TLTGHSDWVNSVAFSPDGQTL 931

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            A  + D    +R++ + TR     + +      + +  FS +G+        D  + ++ 
Sbjct: 932  ASGSLD--GTVRLWDVGTRT-PQGEPLTGHSDWVNSVAFSPDGQTLASVSSWDGTVILWD 988

Query: 287  VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            VD+Q+  +E L +      S ++SPD   +       G ++   +    +          
Sbjct: 989  VDIQNQLSEPLIDHSHWVGSVAFSPDGQTLA----SGGLDETVKLWDLDTRTLLDLLTSI 1044

Query: 347  ASYFDP-------VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWS 398
            +S+           +SP G ++A      +   +  +   G+  + L +    +    +S
Sbjct: 1045 SSHHISSHQIHSVAFSPDGQILASAS---DTVKLWYLNTQGNLSKELPDHPREVMGIAFS 1101

Query: 399  PSGRSLIFSRKKDGDTGSKLYSIDL 423
            P G+ +  +   +      L+++D 
Sbjct: 1102 PDGQIIALASLHE---SVGLWNVDT 1123



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 85/236 (36%), Gaps = 26/236 (11%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            L  ++  G N+    P   + +    FSP+ Q +A A+  +     V L +         
Sbjct: 1075 LWYLNTQG-NLSKELPDHPREVMGIAFSPDGQIIALASLHE----SVGLWNVDTQAY--- 1126

Query: 253  IGNFRSMIL---APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
               F  M     +  FS +G + L S    + ++++ V  ++     LT       S ++
Sbjct: 1127 --KFFGMGYRAKSVAFSPDG-QILASANIAKTVELWDVYTKTR-LGELTGHSHCVESVAF 1182

Query: 310  SPDSSQIVF-ESDREGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLIAFTKF 366
            SP+   +    SDR     + +          K ++           +SP G  +A    
Sbjct: 1183 SPNGQILASGSSDRT----VRLWDVTTRQPLGKPLT-GHSDKVNSIAFSPDGQTLASASK 1237

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             G      V  +      L+   S + +  +SP G++L    +   D   +L+ ID
Sbjct: 1238 DGTVRLWNVKTRTPLGGPLIGHSSWVSSVAFSPDGKTLASGSR---DHTIRLWDID 1290



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 35/102 (34%), Gaps = 9/102 (8%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--- 381
           +  L  +       K I            +SP G  +A     G    + +   D     
Sbjct: 673 RSNLLRVLQAKKHLKTILYRHSFGITSVAFSPDGQTLALASKDGT---VRLWDVDTRTPL 729

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            E L      + +  +SP G+ L  S  +DG    +L+++D 
Sbjct: 730 GEPLTGHFYWVNSVAFSPDGQILA-SASQDG--IVRLWNVDT 768


>gi|186684886|ref|YP_001868082.1| hypothetical protein Npun_F4790 [Nostoc punctiforme PCC 73102]
 gi|186467338|gb|ACC83139.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1210

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 55/283 (19%), Positives = 98/283 (34%), Gaps = 23/283 (8%)

Query: 131 WDVK-DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            DV  D   I      ++   WR+    ++            DF+S    ++ +   G I
Sbjct: 594 VDVSPDSSLIASASIDNTVKLWRRDGTEVATLKGHKGAVRAVDFSSNGQILASAGEDGTI 653

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K    +   DG  ++         ++   FSP+ Q +A A++D      V L   R    
Sbjct: 654 K----LWKLDGTLLKT-FKGHTASVWGIAFSPDGQFIASASWD----ATVKLWK-RDGTL 703

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS----NATERLTNTLFINI 305
            K     +       FS +G+    +   D  + ++  D          + L       +
Sbjct: 704 LKTFQGSKGAFWGVAFSPDGQTIA-AASLDRTVKLWKRDDSGWQNAKPVQTLQGHTAWVV 762

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQGDLIAF 363
             ++SPD   I   S+ +   +L+   S     +     Q  +A      +SP G  IA 
Sbjct: 763 GVAFSPDGQTIASASE-DRTVKLWRRDSISKSYRLDKTLQGHDAGISGVAFSPDGQTIAS 821

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
                    I +   DG+Q R L    +++   T+SP G  + 
Sbjct: 822 ASLDKT---IKLWNIDGTQLRTLRGHSASVWGVTFSPDGSFIA 861



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 90/283 (31%), Gaps = 23/283 (8%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS-- 192
           D + I    + ++   W++        + ++  G KG F           ++    +   
Sbjct: 681 DGQFIASASWDATVKLWKRDG-----TLLKTFQGSKGAFWGVAFSPDGQTIAAASLDRTV 735

Query: 193 -LCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            L   D  G   A            +    FSP+ Q +A A+ D    L      ++  R
Sbjct: 736 KLWKRDDSGWQNAKPVQTLQGHTAWVVGVAFSPDGQTIASASEDRTVKLWRRDSISKSYR 795

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K +    + I    FS +G+    S   D+ + ++  ++       L          +
Sbjct: 796 LDKTLQGHDAGISGVAFSPDGQTIA-SASLDKTIKLW--NIDGTQLRTLRGHSASVWGVT 852

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD S I       G E +  +  + +  ++     +A  +    +     IA T    
Sbjct: 853 FSPDGSFIA----SAGAENVVRLWQSQNPFQKSIVAHKAGIWSIAIASDSSTIATTSHEN 908

Query: 369 EKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLI-FSRK 409
               +      G   + L E    +   ++S     +  F+  
Sbjct: 909 ---MVKFWSSQGKLLKTLTESKGEVSEVSFSGDDNLIALFTSD 948



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 100/310 (32%), Gaps = 64/310 (20%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-------------- 227
            +++ S  +  ++ + + DG  +R L       ++   FSP+   +A              
Sbjct: 817  QTIASASLDKTIKLWNIDGTQLRTL-RGHSASVWGVTFSPDGSFIASAGAENVVRLWQSQ 875

Query: 228  --YATYDDEDILRVYLMDTRIDRAP--------------------KRIGNFRSMILAPRF 265
              +          ++ +    D +                     K +   +  +    F
Sbjct: 876  NPFQKSIVAHKAGIWSIAIASDSSTIATTSHENMVKFWSSQGKLLKTLTESKGEVSEVSF 935

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFES-- 320
            S +     +    D      +V ++      + +    +    S  +SPD   I      
Sbjct: 936  SGDDNLIALFTSDD------TVKIKKRDGTLIASYKSHHSKLTSGVFSPDGQTIAMAGVD 989

Query: 321  ---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                   +++L+   ++ +   +I +  +A  +  V+SP G L+A            +  
Sbjct: 990  KNVQISRRDRLWPGVAHRAATLQILKGHQAEVWHVVFSPDGKLVASASGDNTA---KLWT 1046

Query: 378  KDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             DG+  R LV   + +    +S   + L       GD   KL+++D       L+NT   
Sbjct: 1047 LDGNLFRTLVGHSAAVWRVVFSQDSKMLA---TGSGDNTVKLWTLDG-----KLLNTFKG 1098

Query: 437  ASDPQW-VGF 445
                 W + F
Sbjct: 1099 HKAGIWGIAF 1108



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 75/205 (36%), Gaps = 26/205 (12%)

Query: 151  WRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPS 209
            W  +AH  +    Q + G + +    +       V S    N+  +   DG N+      
Sbjct: 1001 WPGVAHRAA--TLQILKGHQAEVWHVVFSPDGKLVASASGDNTAKLWTLDG-NLFRTLVG 1057

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFS 266
                ++   FS + + +A  + D  + ++++ +D       K +  F+     I    F+
Sbjct: 1058 HSAAVWRVVFSQDSKMLATGSGD--NTVKLWTLD------GKLLNTFKGHKAGIWGIAFT 1109

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             +GK  + S   D ++ ++ +D        LT         + SPD + +V      G +
Sbjct: 1110 PDGK-IVASGSVDASIKLWKLD--GTEVTTLTGHTAAIRVVAISPDGTLLV----SGGDD 1162

Query: 327  QLYVMQSNGSDQKRISQDKEASYFD 351
               ++     + +RI      +Y  
Sbjct: 1163 NTLILW----NLQRILNLDVLNYGC 1183


>gi|298675393|ref|YP_003727143.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Methanohalobium evestigatum Z-7303]
 gi|298288381|gb|ADI74347.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Methanohalobium evestigatum Z-7303]
          Length = 597

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 106/283 (37%), Gaps = 27/283 (9%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           K   +     +        ++  L ++D DG+ +R L       + +  +S + +K+A  
Sbjct: 185 KWGSDGLRALILMKDKKSQMEYQLYLVDMDGSILRKLGNKSIDDVSDAFWSNDGEKIAI- 243

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVD 288
                D + V   +    R   + G+F        +    +R    +        IY V+
Sbjct: 244 ---QGDGIWVVNRNNSNLRQVTQKGSFLE------WGKEDERLYYKTGSVSTGYSIYMVN 294

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR---ISQDK 345
           +      +++   + +   S SPD  +I+F +    + +LY+  S+G +++    I++++
Sbjct: 295 INGTGNRKISEKCYKDDVFSLSPDEEKILFTTFH--RSKLYISDSDGGNKRLFLNITKER 352

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                   WSP G+ +++     E   +  +  DG+    +  D       W+PSG  + 
Sbjct: 353 HIPDQGATWSPTGNKVSYI----ENGDLYTINTDGTNRSKITSDVGQYK--WNPSGDYIA 406

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYA----SDPQWVG 444
           +      D    L +    G  +T I+   +      D  W  
Sbjct: 407 YITVNGSDKRPILVATP-EGNKKTRISPGRHEKFLLKDGGWSP 448



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 72/410 (17%), Positives = 152/410 (37%), Gaps = 72/410 (17%)

Query: 48  VSIAFTKFVSID---ELGGKVSEVVS----KDLQRSDVFNLISQD-----SFKQKITNPD 95
           +SI+   +        +G  V  V       +L  +    +I ++     S ++ + +  
Sbjct: 121 LSISPPDWNPNGNRIGIGLGVFRVKQLDAIANL-FTGNLKVIDKNITTINSMRENLMDVK 179

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
               F+ W S G + L+          + ++E++L+ V     I            RK+ 
Sbjct: 180 WQGPFK-WGSDGLRALIL-----MKDKKSQMEYQLYLVDMDGSI-----------LRKLG 222

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           +   DD+          F S           G     + V++R+ +N+R +T     +  
Sbjct: 223 NKSIDDV-------SDAFWSNDGEKIAIQGDG-----IWVVNRNNSNLRQVTQKGSFLE- 269

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-FRSMILAPRFSSNGKRALI 274
              +    +++ Y T        +Y+++       K     ++  + +   S + ++ L 
Sbjct: 270 ---WGKEDERLYYKTGSVSTGYSIYMVNINGTGNRKISEKCYKDDVFS--LSPDEEKILF 324

Query: 275 SVQKDEAMDIYSVDLQSNATE---RLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYV 330
           +        +Y  D           +T    I +  A++SP  +++ +         LY 
Sbjct: 325 TTFH--RSKLYISDSDGGNKRLFLNITKERHIPDQGATWSPTGNKVSYI----ENGDLYT 378

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVED 389
           + ++G+++ +I+ D         W+P GD IA+   +G +K  I V   +G+++  +   
Sbjct: 379 INTDGTNRSKITSD----VGQYKWNPSGDYIAYITVNGSDKRPILVATPEGNKKTRISPG 434

Query: 390 SNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL-INTP 434
            + +       WSP G  L+F      D G  LY     G  + + I TP
Sbjct: 435 RHEKFLLKDGGWSPDGSRLLFGSI---DYGRGLYVAKFEGYKKVMSIYTP 481



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 121/309 (39%), Gaps = 44/309 (14%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL------TPSRDQILFEPRF 219
           +     D N  ++    + ++G+  ++L ++  +G  ++ +      T  +   +  P +
Sbjct: 69  VGRWGPDGNRLLVNSKHNPLNGVELHALYMVSPNGTGVKEIVSTPNNTKDKSLSISPPDW 128

Query: 220 SPNQQKV-------------AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +PN  ++             A A     ++  +    T I+   + + + +      ++ 
Sbjct: 129 NPNGNRIGIGLGVFRVKQLDAIANLFTGNLKVIDKNITTINSMRENLMDVK-WQGPFKWG 187

Query: 267 SNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESD 321
           S+G RALI + KD        +Y VD+  +   +L N    ++S A +S D  +I  + D
Sbjct: 188 SDGLRALI-LMKDKKSQMEYQLYLVDMDGSILRKLGNKSIDDVSDAFWSNDGEKIAIQGD 246

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 ++V+  N S+ ++++Q      +         L   T      ++I ++  +G+
Sbjct: 247 -----GIWVVNRNNSNLRQVTQKGSFLEWGKE---DERLYYKTGSVSTGYSIYMVNINGT 298

Query: 382 QERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL---INTPAYA 437
             R + E        + SP    ++F+        SKLY  D +G N+ L   I    + 
Sbjct: 299 GNRKISEKCYKDDVFSLSPDEEKILFTTFH----RSKLYISDSDGGNKRLFLNITKERHI 354

Query: 438 SD--PQWVG 444
            D    W  
Sbjct: 355 PDQGATWSP 363



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 87/259 (33%), Gaps = 35/259 (13%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNF 256
            N          I+   R+ P+  ++   +  +     ++  +Y++        + +   
Sbjct: 54  ENANMEVKDSRDIVMVGRWGPDGNRLLVNSKHNPLNGVELHALYMVSPNGTGVKEIVSTP 113

Query: 257 RS------MILAPRFSSNGKRALISVQKDEAMDI-YSVDLQSNAT----ERLTNTLF--- 302
            +       I  P ++ NG R  I +       +    +L +       + +T       
Sbjct: 114 NNTKDKSLSISPPDWNPNGNRIGIGLGVFRVKQLDAIANLFTGNLKVIDKNITTINSMRE 173

Query: 303 ------INISASYSPDS-SQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPV 353
                       +  D    ++   D++ +   QLY++  +GS  +++         D  
Sbjct: 174 NLMDVKWQGPFKWGSDGLRALILMKDKKSQMEYQLYLVDMDGSILRKLGNKSIDDVSDAF 233

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           WS  G+ IA      +   I V+ ++ S  R + +  +     W      L +       
Sbjct: 234 WSNDGEKIAI-----QGDGIWVVNRNNSNLRQVTQKGSFLE--WGKEDERLYYKTG-SVS 285

Query: 414 TGSKLYSIDLNGRNETLIN 432
           TG  +Y +++NG     I+
Sbjct: 286 TGYSIYMVNINGTGNRKIS 304



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 63/174 (36%), Gaps = 29/174 (16%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQ-----LYVMQSNGSDQKRI------SQDKEA 347
           ++  I +   + PD ++++  S            LY++  NG+  K I      ++DK  
Sbjct: 62  DSRDIVMVGRWGPDGNRLLVNSKHNPLNGVELHALYMVSPNGTGVKEIVSTPNNTKDKSL 121

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLLVE-------------DSNLQ 393
           S   P W+P G+ I           +  +        +++ +             D   Q
Sbjct: 122 SISPPDWNPNGNRIGIGLGVFRVKQLDAIANLFTGNLKVIDKNITTINSMRENLMDVKWQ 181

Query: 394 APT-WSPSG-RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA--YASDPQWV 443
            P  W   G R+LI  + K      +LY +D++G     +   +    SD  W 
Sbjct: 182 GPFKWGSDGLRALILMKDKKSQMEYQLYLVDMDGSILRKLGNKSIDDVSDAFWS 235


>gi|254786855|ref|YP_003074284.1| lipoprotein [Teredinibacter turnerae T7901]
 gi|237687152|gb|ACR14416.1| putative lipoprotein [Teredinibacter turnerae T7901]
          Length = 394

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 51/296 (17%), Positives = 108/296 (36%), Gaps = 45/296 (15%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRD------GANIRYLTPSRDQILFEPRFSPNQQKV 226
            N  ++FVS    +  I  +    + D      G            +  +P+FSPN + +
Sbjct: 80  GNGDLIFVSNRTENPKIDMAKRSENYDLFLQMKGQPFPTKIYENPGLEVQPKFSPNGKII 139

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-- 284
           +Y + + ++    +L+  R    P  + + + +     +S +  +  I+   +    I  
Sbjct: 140 SYVSRNRDNQQLSFLVPGR--EEPLVVLSSKEITSY-AWSPDSSQLAIAYNDETHSYIDV 196

Query: 285 -YSVDLQSNATERLTNTLFINISA--------------SYSPDSSQIVFESD--REGKEQ 327
             + D      +R+      + +               S+SP + +I F       G  Q
Sbjct: 197 VQTADQSRKTLQRILLEGPADSAPATDTDNFQKQFAYVSWSPAADKIAFIRHPRHRGTRQ 256

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---------------EKFA 372
           L+VM  NG + + IS  +        W+  GD + ++   G                   
Sbjct: 257 LWVMPLNG-EPQLISPPEAQVQDGISWNSAGDHLLYSALLGYKFYWDEASQRKIYEGGMH 315

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-GDTGSKLYSIDLNGRN 427
           I   +  G+ ++L   D   + PT+SP  + + +   ++ G    +L+ +  +G N
Sbjct: 316 IFEYQVGGNSKQLTKHDHMFKNPTYSPDEQQIAYLYAEELGAREYQLFRMARDGSN 371



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 87/253 (34%), Gaps = 34/253 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---- 275
           S     + ++       + +Y  D+  D+  KR  + R   L    S NG    +S    
Sbjct: 34  SHGPSTLYFSAKTIGPSVNIYSADSN-DQITKRTDDERWRDLELDVSGNGDLIFVSNRTE 92

Query: 276 ------VQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                  ++ E  D++ + ++      ++     + +   +SP+   I + S     +QL
Sbjct: 93  NPKIDMAKRSENYDLF-LQMKGQPFPTKIYENPGLEVQPKFSPNGKIISYVSRNRDNQQL 151

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE----R 384
             +     +   +   KE + +   WSP    +A          I V++          R
Sbjct: 152 SFLVPGREEPLVVLSSKEITSY--AWSPDSSQLAIAYNDETHSYIDVVQTADQSRKTLQR 209

Query: 385 LLVEDSNLQAP--------------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +L+E     AP              +WSP+   + F R        +L+ + LNG  + +
Sbjct: 210 ILLEGPADSAPATDTDNFQKQFAYVSWSPAADKIAFIRHPRHRGTRQLWVMPLNGEPQLI 269

Query: 431 INTPAYASDP-QW 442
               A   D   W
Sbjct: 270 SPPEAQVQDGISW 282


>gi|239906866|ref|YP_002953607.1| putative S9 family peptidase [Desulfovibrio magneticus RS-1]
 gi|239796732|dbj|BAH75721.1| putative S9 family peptidase [Desulfovibrio magneticus RS-1]
          Length = 693

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 93/282 (32%), Gaps = 58/282 (20%)

Query: 218 RFSPNQQKVAYATYDDED----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           R + + ++VA+      D     +   ++        + +    +    PRFS +GK   
Sbjct: 53  RVAADGKRVAFVVTRMSDQAGEPVSRIVLTDMAREGGRPVTPATTSCDHPRFSPDGKWLA 112

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQ--- 327
              Q D A +++ + L +  + RL++     +  ++SPD  ++      S + G  +   
Sbjct: 113 YLCQGDNASELHLLQLAAGQSRRLSDGRADILDLAFSPDGKKLAVTATTSPKAGPNRPEG 172

Query: 328 ----LYVMQSNGS--DQKRISQDKEA---------SYFDPVWSPQGDLIAFTKFSG---- 368
               + V+ S G       ++  +                 +SP G  I F   +     
Sbjct: 173 CDGDVEVLDSPGGLAGLYLLTLSQPGVMRQLVADRDVGAFAFSPDGRRIVFETANPHAPP 232

Query: 369 -----------------EKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKK 410
                                I V+  D    +L+   D++   PT SP GR L +    
Sbjct: 233 RGRAHNGAAGGTAPVDAGHADIAVVDLDKGGVKLVAASDASENMPTVSPDGRLLAYVATA 292

Query: 411 DGDT---GSKLYSIDLNGRNETLI-NTP-------AYASDPQ 441
                    ++  + L G     +  TP        +A D Q
Sbjct: 293 APGFYYNAGRVMVVPLTGGESRPLAPTPDARPELLGWAEDGQ 334



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 62/310 (20%), Positives = 112/310 (36%), Gaps = 60/310 (19%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +S+     + +  L  M R+G        +       PRFSP+ + +AY      D    
Sbjct: 68  MSDQAGEPVSRIVLTDMAREGGRPVTPATTSCD---HPRFSPDGKWLAY--LCQGDNASE 122

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV----------------------Q 277
             +        +R+ + R+ IL   FS +GK+  ++                        
Sbjct: 123 LHLLQLAAGQSRRLSDGRADILDLAFSPDGKKLAVTATTSPKAGPNRPEGCDGDVEVLDS 182

Query: 278 KDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDR-------------- 322
                 +Y + L       +L     +   A +SPD  +IVFE+                
Sbjct: 183 PGGLAGLYLLTLSQPGVMRQLVADRDVGAFA-FSPDGRRIVFETANPHAPPRGRAHNGAA 241

Query: 323 -------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---- 371
                   G   + V+  +    K ++   +AS   P  SP G L+A+   +   F    
Sbjct: 242 GGTAPVDAGHADIAVVDLDKGGVKLVA-ASDASENMPTVSPDGRLLAYVATAAPGFYYNA 300

Query: 372 -AIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             + V+   G + R L    D+  +   W+  G+SL+  R+ DG  G+ LY++ L+G+  
Sbjct: 301 GRVMVVPLTGGESRPLAPTPDARPELLGWAEDGQSLL-VREADG-VGAALYALPLDGQPT 358

Query: 429 TLINTPAYAS 438
           T ++      
Sbjct: 359 TRLDDGRRIP 368



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 48/135 (35%), Gaps = 11/135 (8%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +         + V+D D   ++ L  + D     P  SP+ + +AY           Y  
Sbjct: 244 TAPVDAGHADIAVVDLDKGGVK-LVAASDASENMPTVSPDGRLLAYVATAAPGF---YYN 299

Query: 243 DTRIDRAPKRIGNFRSMILAPR-------FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             R+   P   G  R +   P        ++ +G+  L+         +Y++ L    T 
Sbjct: 300 AGRVMVVPLTGGESRPLAPTPDARPELLGWAEDGQSLLVREADGVGAALYALPLDGQPTT 359

Query: 296 RLTNTLFINISASYS 310
           RL +   I + AS S
Sbjct: 360 RLDDGRRIPLQASLS 374


>gi|332706431|ref|ZP_08426492.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332354315|gb|EGJ33794.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1427

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 83/221 (37%), Gaps = 19/221 (8%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +        ++   FS + Q +A A++D+     V L + R  +    +    + + +  
Sbjct: 1196 HTLKGHSAPVYSVAFSRDGQTIATASWDN----TVKLWN-REGKLLHTLNGHNAPVYSVA 1250

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS +G+    S   D  + ++  + Q      L     +  S  +S D   I   S R+ 
Sbjct: 1251 FSPDGQTIA-SASWDNTVKLW--NHQGKELHTLKGHSALVTSLVFSDDGQTIASAS-RDN 1306

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              +L+     G +   ++  ++      V+SP G  IA   +      + +    G +  
Sbjct: 1307 TVKLW--NLQGKELHTLTGHRDW-VNSVVFSPDGKTIASASWDKT---VKLWNLQGKELH 1360

Query: 385  LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             L    +   +  +SP G+++        D    L++ DL+
Sbjct: 1361 TLTGHRDWVNSVAFSPDGKTIA---SASADNTVILWNFDLD 1398



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 107/283 (37%), Gaps = 28/283 (9%)

Query: 164  QSITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
             ++TG        + F    +++ S    N++ + +  G  + Y        +    FS 
Sbjct: 907  HTLTGHNSAHVYSVAFSRDGQTIASASDDNTVKLWNLQGKEL-YTLTGHSAPVISVTFSR 965

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            +   +A A++D      V L +    +    +    + +++  FS +G     S  +D  
Sbjct: 966  DGMTIASASWDK----TVKLWNYE-GKEIHTLTGHSAPVISVTFSRDGMTIA-SASRDNT 1019

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            + ++  +LQ      LT      IS ++S D   I   SD      + +    G +   +
Sbjct: 1020 VKLW--NLQGKTLHTLTGHSAPVISVTFSRDGMTIASASD---DNTVKLWNLQGKELHTL 1074

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPS 400
            +    A     V+S  G  IA          + +   +G +   L    +++ +  +S  
Sbjct: 1075 TGHNSAPVNSVVFSYDGQTIASASDDNT---VKLWTLEGKELHTLKGHSADVTSVAFSRD 1131

Query: 401  GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            G+++  +     D   KL+  +L G+   L++T    SD  WV
Sbjct: 1132 GQTIATASW---DKTVKLW--NLQGK---LLHTLTGHSD--WV 1164



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 95/265 (35%), Gaps = 23/265 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ +     ++ + +  G  +  LT   D +     FS + Q +A A+ D+     V L
Sbjct: 1133 QTIATASWDKTVKLWNLQGKLLHTLTGHSDWVNSV-VFSYDGQTIATASDDN----TVKL 1187

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             + + +      G+    + +  FS +G+    +   D  + ++  + +      L    
Sbjct: 1188 WNLKREYLHTLKGHSAP-VYSVAFSRDGQTIA-TASWDNTVKLW--NREGKLLHTLNGHN 1243

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S ++SPD   I   S       + +    G +   + +   A     V+S  G  I
Sbjct: 1244 APVYSVAFSPDGQTIASAS---WDNTVKLWNHQGKELHTL-KGHSALVTSLVFSDDGQTI 1299

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A          + +    G +   L    +   +  +SP G+++  +     D   KL+ 
Sbjct: 1300 ASASRDNT---VKLWNLQGKELHTLTGHRDWVNSVVFSPDGKTIASASW---DKTVKLW- 1352

Query: 421  IDLNGRN-ETLINTPAYASDPQWVG 444
             +L G+   TL     + +   +  
Sbjct: 1353 -NLQGKELHTLTGHRDWVNSVAFSP 1376



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 93/252 (36%), Gaps = 30/252 (11%)

Query: 134  KDRKQIIGKKFFSSPASW---RKIAHTI---SDDIYQSITGEKGDFNSRILFVSESVVSG 187
             D + I      ++   W   R+  HT+   S  +Y       G          +++ + 
Sbjct: 1171 YDGQTIATASDDNTVKLWNLKREYLHTLKGHSAPVYSVAFSRDG----------QTIATA 1220

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               N++ + +R+G  +  L    +  ++   FSP+ Q +A A++D+     V L +    
Sbjct: 1221 SWDNTVKLWNREGKLLHTL-NGHNAPVYSVAFSPDGQTIASASWDN----TVKLWN-HQG 1274

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            +    +    +++ +  FS +G+    S  +D  + ++  +LQ      LT       S 
Sbjct: 1275 KELHTLKGHSALVTSLVFSDDGQTIA-SASRDNTVKLW--NLQGKELHTLTGHRDWVNSV 1331

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +SPD   I   S     + + +    G +   ++  ++       +SP G  IA     
Sbjct: 1332 VFSPDGKTIASAS---WDKTVKLWNLQGKELHTLTGHRDW-VNSVAFSPDGKTIASASAD 1387

Query: 368  GEKFAIGVMKKD 379
                 +     D
Sbjct: 1388 NTVI-LWNFDLD 1398



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 78/221 (35%), Gaps = 18/221 (8%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N           +    FSP+ Q +A A+ D      V L + +  +    +    + 
Sbjct: 779 GVNQYNSLDKHTDTVTSVTFSPDSQTIASASSDK----TVKLWNLQ-GKELHTLKGHSAD 833

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + +  FS +G+    +   D  + ++  +LQ    + L+       S ++SPD   I   
Sbjct: 834 VTSVVFSYDGQTIA-TASLDNTVKLW--NLQGKELQTLSGHNEPVTSLTFSPDGQTIATA 890

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S       + +    G +   ++    A  +   +S  G  IA          + +    
Sbjct: 891 SL---DNTVKLWNLQGKELHTLTGHNSAHVYSVAFSRDGQTIASASDDNT---VKLWNLQ 944

Query: 380 GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           G +   L    + + + T+S  G ++  +     D   KL+
Sbjct: 945 GKELYTLTGHSAPVISVTFSRDGMTIASASW---DKTVKLW 982



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 86/242 (35%), Gaps = 25/242 (10%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++ S    N++ + +  G  +  LT      +    FS + Q +A A+ D+     V L
Sbjct: 1050 MTIASASDDNTVKLWNLQGKELHTLTGHNSAPVNSVVFSYDGQTIASASDDN----TVKL 1105

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                  +    +    + + +  FS +G+    +   D+ + ++  +LQ      LT   
Sbjct: 1106 WTLE-GKELHTLKGHSADVTSVAFSRDGQTIA-TASWDKTVKLW--NLQGKLLHTLTGHS 1161

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S  +S D   I   SD      + +          + +   A  +   +S  G  I
Sbjct: 1162 DWVNSVVFSYDGQTIATASD---DNTVKLWNLKREYLHTL-KGHSAPVYSVAFSRDGQTI 1217

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSK 417
            A   +         +K    + +LL   +   AP     +SP G+++  +     D   K
Sbjct: 1218 ATASWDN------TVKLWNREGKLLHTLNGHNAPVYSVAFSPDGQTIASASW---DNTVK 1268

Query: 418  LY 419
            L+
Sbjct: 1269 LW 1270



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 93/242 (38%), Gaps = 20/242 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ +  + N++ + +  G  +  LT      ++   FS + Q +A A+ D+     V L
Sbjct: 885  QTIATASLDNTVKLWNLQGKELHTLTGHNSAHVYSVAFSRDGQTIASASDDN----TVKL 940

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             + +  +    +    + +++  FS +G     S   D+ + ++  + +      LT   
Sbjct: 941  WNLQ-GKELYTLTGHSAPVISVTFSRDGMTIA-SASWDKTVKLW--NYEGKEIHTLTGHS 996

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               IS ++S D   I   S R+   +L+     G     ++    A      +S  G  I
Sbjct: 997  APVISVTFSRDGMTIASAS-RDNTVKLW--NLQGKTLHTLT-GHSAPVISVTFSRDGMTI 1052

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            A          + +    G +   L     + + +  +S  G+++  +     D   KL+
Sbjct: 1053 ASASDDNT---VKLWNLQGKELHTLTGHNSAPVNSVVFSYDGQTIASASD---DNTVKLW 1106

Query: 420  SI 421
            ++
Sbjct: 1107 TL 1108



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 56/147 (38%), Gaps = 23/147 (15%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPDS  I   S     + + +    G +   + +   A     V+S  G  IA  
Sbjct: 794 TSVTFSPDSQTIASASS---DKTVKLWNLQGKELHTL-KGHSADVTSVVFSYDGQTIATA 849

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYS 420
                   + +    G + + L   S    P    T+SP G+++  +     D   KL++
Sbjct: 850 SLDNT---VKLWNLQGKELQTL---SGHNEPVTSLTFSPDGQTIATASL---DNTVKLWN 900

Query: 421 I------DLNGRNETLINTPAYASDPQ 441
           +       L G N   + + A++ D Q
Sbjct: 901 LQGKELHTLTGHNSAHVYSVAFSRDGQ 927


>gi|56419496|ref|YP_146814.1| acylaminoacyl-peptidase [Geobacillus kaustophilus HTA426]
 gi|56379338|dbj|BAD75246.1| acylaminoacyl-peptidase [Geobacillus kaustophilus HTA426]
          Length = 673

 Score = 94.7 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 81/237 (34%), Gaps = 52/237 (21%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYS----VDLQSNATERLTNTLFINISASYSPDSS 314
            +  P ++ +G RA+   +  +    Y     +     +  + T   + ++   +SP   
Sbjct: 23  SVRDPHYAPDGTRAVFVEKSIDEEKQYRSHLWIWAADGSVRQWTFGRWRDMKPRFSPRGE 82

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA------------ 362
            I F SDR G+ QL+++ +NG + ++++  K     D VWSP G  +             
Sbjct: 83  MIAFLSDRSGRTQLWLLPANGGEARQLTFFKNG-VRDYVWSPDGTFLIALTTLGDEETIE 141

Query: 363 -----------------------FTKFSGEKFAIGVMK-------KDGSQERLLVEDSNL 392
                                  + K     F  G            G  E L   +  +
Sbjct: 142 DREEQKTAEQKPADSKPRVVERLYYKSDASGFLDGKQDVLVRIDAASGKTEALTGREEEI 201

Query: 393 QAPTWSPSGRSLIFSRKKDGD----TGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
            +   SP+G++L F   ++ D        +   DL  + ET L N     +   W  
Sbjct: 202 GSFAVSPTGQTLAFVANRNDDPDTTFTRDIVLFDLESKAETNLTNGCGTFASLAWSP 258



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 86/276 (31%), Gaps = 54/276 (19%)

Query: 210 RDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           R + + +P ++P+  +  +   + D+E   R +L     D + ++    R   + PRFS 
Sbjct: 20  RLRSVRDPHYAPDGTRAVFVEKSIDEEKQYRSHLWIWAADGSVRQWTFGRWRDMKPRFSP 79

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS------------- 314
            G+       +     ++ +        +LT          +SPD +             
Sbjct: 80  RGEMIAFLSDRSGRTQLWLLPANGGEARQLTFFKNGVRDYVWSPDGTFLIALTTLGDEET 139

Query: 315 -----------------------QIVFESDREG-----KEQLYVMQSNGSDQKRISQDKE 346
                                  ++ ++SD  G     ++ L  + +     + ++  +E
Sbjct: 140 IEDREEQKTAEQKPADSKPRVVERLYYKSDASGFLDGKQDVLVRIDAASGKTEALT-GRE 198

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
                   SP G  +AF     +         I +   +   E  L        +  WSP
Sbjct: 199 EEIGSFAVSPTGQTLAFVANRNDDPDTTFTRDIVLFDLESKAETNLTNGCGTFASLAWSP 258

Query: 400 SGRSLIFSRK---KDGDTGSKLYSIDLNGRNETLIN 432
            G  L          G T  +LY  +     + ++ 
Sbjct: 259 DGTKLAAIGHDLAYLGATLHRLYVFEPERGTKRVLT 294



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 92/309 (29%), Gaps = 67/309 (21%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-------------------- 227
             +  L ++  +G   R LT  ++ +     +SP+   +                     
Sbjct: 91  SGRTQLWLLPANGGEARQLTFFKNGVRDY-VWSPDGTFLIALTTLGDEETIEDREEQKTA 149

Query: 228 ---------------YATYDDEDILR----VYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                          Y   D    L     V +         + +      I +   S  
Sbjct: 150 EQKPADSKPRVVERLYYKSDASGFLDGKQDVLVRIDAASGKTEALTGREEEIGSFAVSPT 209

Query: 269 GKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD- 321
           G+       +++  D      I   DL+S A   LTN      S ++SPD +++      
Sbjct: 210 GQTLAFVANRNDDPDTTFTRDIVLFDLESKAETNLTNGCGTFASLAWSPDGTKLAAIGHD 269

Query: 322 ----REGKEQLYVMQSNGSDQKRISQDKEASYFD--------------PVWSPQGDLIAF 363
                    +LYV +     ++ ++ D +    D              P+W+  G  +  
Sbjct: 270 LAYLGATLHRLYVFEPERGTKRVLTADWDVHLGDAMVGDTHADAKGPGPIWASDGSGLYV 329

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           T     +  +  +  DG    ++  + +L      PS +    +   +      LY I L
Sbjct: 330 TASERGRVNLYFVPLDGPIVPMIEGNFHLYGLAIHPSEQQ-AIAAMSEPTVIGDLYIISL 388

Query: 424 -NGRNETLI 431
            +G    L 
Sbjct: 389 EDGTKTRLT 397


>gi|332706188|ref|ZP_08426257.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332355025|gb|EGJ34496.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 670

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 96/267 (35%), Gaps = 15/267 (5%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV---VSGIIKNSLCVMDRD 199
           ++ + P++   +        Y   T      + R + VS      VSG   +++ + +  
Sbjct: 359 RYQTFPSNLSFLIAGFPSSTYLKATLSGHSNSVRSIAVSPDNQYLVSGSNDHTVKIWNLP 418

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
              +       D  ++    +P+ + +A       D   + + + +  +  K +   +  
Sbjct: 419 KGELVRTLNGHDGNVYSVAITPDGENIA----SGGDDNTIKIWNLKRGQLKKNLTGHQGF 474

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVF 318
           I +   SS+GK  + S   D+ + ++  +L +   ++ LT       S   SPD   +V 
Sbjct: 475 ISSVAISSDGKTLV-SGSYDQTIKVW--NLHTGKLKQTLTGETNWVSSVVISPDGKTLV- 530

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                G   + +   +  + K+       S    + SP G  + F+        I  +  
Sbjct: 531 --SGNGGNTIRIWDLDTGNLKKTLTGHRDSVVSIIISPDGKTL-FSSSLDRNIKIWDLTI 587

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLI 405
              +  L      + +   SP G++L+
Sbjct: 588 GELKNTLTGHIYYVHSLAISPDGKTLV 614



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 77/233 (33%), Gaps = 16/233 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E++ SG   N++ + +     ++         +     S + + +   +YD      + +
Sbjct: 443 ENIASGGDDNTIKIWNLKRGQLKKNLTGHQGFISSVAISSDGKTLVSGSYDQ----TIKV 498

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            +    +  + +    + + +   S +GK  +     +    I   DL +   ++ LT  
Sbjct: 499 WNLHTGKLKQTLTGETNWVSSVVISPDGKTLV---SGNGGNTIRIWDLDTGNLKKTLTGH 555

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +S   SPD   + F S  +    + +      + K               SP G  
Sbjct: 556 RDSVVSIIISPDGKTL-FSSSLDRN--IKIWDLTIGELKNTLTGHIYYVHSLAISPDGKT 612

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKD 411
           +     +     I V   +  + +  +        +   SP G++L+   + D
Sbjct: 613 LVSGSANNT---IKVWNLETGELKNTLTGHTNWVSSLAISPDGKTLVSGSRDD 662



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 67/206 (32%), Gaps = 12/206 (5%)

Query: 166 ITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           +TG +G  +S  +    +++VSG    ++ V +     ++         +     SP+ +
Sbjct: 468 LTGHQGFISSVAISSDGKTLVSGSYDQTIKVWNLHTGKLKQTLTGETNWVSSVVISPDGK 527

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +            + + D       K +   R  +++   S +GK    S   D  + I
Sbjct: 528 TLV----SGNGGNTIRIWDLDTGNLKKTLTGHRDSVVSIIISPDGKTL-FSSSLDRNIKI 582

Query: 285 YSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +  DL     +  LT  ++   S + SPD   +V  S       + V      + K    
Sbjct: 583 W--DLTIGELKNTLTGHIYYVHSLAISPDGKTLVSGS---ANNTIKVWNLETGELKNTLT 637

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGE 369
                      SP G  +        
Sbjct: 638 GHTNWVSSLAISPDGKTLVSGSRDDS 663



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 82/200 (41%), Gaps = 14/200 (7%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSL 193
           D K ++   +  +   W    HT    + Q++TGE    +S ++    +++VSG   N++
Sbjct: 483 DGKTLVSGSYDQTIKVWNL--HT--GKLKQTLTGETNWVSSVVISPDGKTLVSGNGGNTI 538

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            + D D  N++         +     SP+ + +  ++ D      + + D  I      +
Sbjct: 539 RIWDLDTGNLKKTLTGHRDSVVSIIISPDGKTLFSSSLDR----NIKIWDLTIGELKNTL 594

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPD 312
                 + +   S +GK  + S   +  + ++  +L++   +  LT       S + SPD
Sbjct: 595 TGHIYYVHSLAISPDGKTLV-SGSANNTIKVW--NLETGELKNTLTGHTNWVSSLAISPD 651

Query: 313 SSQIVFESDREGKEQLYVMQ 332
              +V  S R+   +L+ + 
Sbjct: 652 GKTLVSGS-RDDSIKLWKLP 670


>gi|298244157|ref|ZP_06967963.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297551638|gb|EFH85503.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 614

 Score = 94.3 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 86/210 (40%), Gaps = 18/210 (8%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA------TERLTNTLFIN 304
           +R  N RS   A  FS +G+            +++SV +            +LT      
Sbjct: 9   ERYLNVRSATGA-SFSPDGQHISFLTNITGVAEVWSVSIDQPNLQEPAWPRQLTFRGERV 67

Query: 305 ISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             A+++P +  ++   D  G E  QL+++ ++GS+ + +++  E  +    WSP G+ I 
Sbjct: 68  SGATFAPHADTLLVSGDIGGNERAQLFLLSADGSEFRALTEKPEVMHSFGGWSPDGERIV 127

Query: 363 FTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLY 419
           +         F +  M+    + RLL+E      P  +SP G+ ++  R+ +  + + L 
Sbjct: 128 YNSNERDARFFDVYEMQVSTGECRLLLEQDGSNMPVRYSPDGKQVL-VRRVESLSRNALI 186

Query: 420 SIDLNGRNET-LINTPAYASD----PQWVG 444
            ID++      L       +     P W  
Sbjct: 187 LIDIDSGEARDLTPDLGEGAALHATPFWSA 216



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 98/272 (36%), Gaps = 22/272 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDT 244
            G  +  L ++  DG+  R LT   + +     +SP+ +++ Y + + +     VY M  
Sbjct: 86  GGNERAQLFLLSADGSEFRALTEKPEVMHSFGGWSPDGERIVYNSNERDARFFDVYEMQV 145

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEAMDIYSVDLQSNATERLT-- 298
                 + +       +  R+S +GK+ L+    S+ ++    +  +D+ S     LT  
Sbjct: 146 STGEC-RLLLEQDGSNMPVRYSPDGKQVLVRRVESLSRN---ALILIDIDSGEARDLTPD 201

Query: 299 --NTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                 ++ +  +S D   +    +RE     L  +    ++ + +S D          +
Sbjct: 202 LGEGAALHATPFWSADRKGLYLLCNRERDFLSLAYLDLATTELRYLS-DIPWDVEALAVT 260

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAP----TWSPSGRSLIFSRK 409
             G  +A          + +       E+  +L+  +  ++      WS  G  L  +  
Sbjct: 261 RDGASLAMVINEDGISRLELFDVAQGWEQRHVLLAPTLPKSVVLDLAWSQDGAKLAITLS 320

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              D  + ++  D+ G +       +    P+
Sbjct: 321 -GADEPTDIWIWDMAGGHIQRATLSSTGGIPR 351



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 85/211 (40%), Gaps = 18/211 (8%)

Query: 218 RFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            FSP+ Q +++ T          + +   + +    P+++      +    F+ +    L
Sbjct: 21  SFSPDGQHISFLTNITGVAEVWSVSIDQPNLQEPAWPRQLTFRGERVSGATFAPHADTLL 80

Query: 274 ISVQKDEA--MDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESD-REGK-EQL 328
           +S          ++ +    +    LT    +  S   +SPD  +IV+ S+ R+ +   +
Sbjct: 81  VSGDIGGNERAQLFLLSADGSEFRALTEKPEVMHSFGGWSPDGERIVYNSNERDARFFDV 140

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV 387
           Y MQ +  +  R+  +++ S     +SP G  +   +     + A+ ++  D  + R L 
Sbjct: 141 YEMQVSTGEC-RLLLEQDGSNMPVRYSPDGKQVLVRRVESLSRNALILIDIDSGEARDLT 199

Query: 388 ED-----SNLQAPTWSPS--GRSLIFSRKKD 411
            D     +    P WS    G  L+ +R++D
Sbjct: 200 PDLGEGAALHATPFWSADRKGLYLLCNRERD 230


>gi|332664229|ref|YP_004447017.1| (myosin heavy-chain) kinase [Haliscomenobacter hydrossis DSM 1100]
 gi|332333043|gb|AEE50144.1| (Myosin heavy-chain) kinase., Histone acetyltransferase
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 1129

 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 55/336 (16%), Positives = 112/336 (33%), Gaps = 53/336 (15%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           SL  Q L TG   K          ++WD+   + ++  +            H+ +  +  
Sbjct: 411 SLNGQRLATGSRDKTA--------KVWDLSTGQALLSLE-----------GHSAA--VLS 449

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                 G          + + +G    +  V D                +    FSP+ Q
Sbjct: 450 VAFSPDG----------QRLATGSRDKTAKVWDLSTGRALLSLEGHSDAVRSVAFSPDGQ 499

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           K+A  + D      V +      RA   +    + + +  FS +G+R   +  +D+   I
Sbjct: 500 KLATGSEDK----TVNVWHLSTGRALLNLQGHSAYVSSVSFSPDGQRLA-TGSRDKTAKI 554

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + +         L        S S+SPD  ++   S+        V   +        Q 
Sbjct: 555 WDLS-TGKTLLSLEGHSDAVWSVSFSPDGQRLATGSE---DNTAKVWDLSAGKALLSLQG 610

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSG 401
             A      +SP G  +A   +    +   +      Q  LL    +   + + ++SP G
Sbjct: 611 HSADVRSVAFSPDGRRLATGSWD---YTAKIWDLSTGQA-LLSLQGHSDAVWSVSFSPDG 666

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           + L    +   D  +K++ + + G  + L++   ++
Sbjct: 667 QRLATGSR---DKTAKIWDL-ITG--QALLSLEGHS 696



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 103/301 (34%), Gaps = 41/301 (13%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            ++WD+   K ++  +            H  SD I        G          + + +G
Sbjct: 216 LKVWDLSTGKALLSLE-----------GH--SDAILSVAFSPDG----------QRLATG 252

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              N+  V D                ++   FSP+ Q++A  ++D+       +      
Sbjct: 253 SRDNTAKVWDSTTGKALLTLQGHSSWIYSVAFSPDGQRLATGSWDN----TAKVWRLNTG 308

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +A   +    + + +  FS +G+R + +   D    ++ ++    A   L        S 
Sbjct: 309 KALLSLEGHSAYVSSVSFSPDGQRLV-TGSWDHTAKVWDLN-TGKALRNLEGHSDDVWSV 366

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD  ++     R+   +++    +        +    + +   +S  G  +A     
Sbjct: 367 AFSPDGQRLA-TGSRDKTAKIW--DLSTGQALLSLEGHSDAVWSVAFSLNGQRLATGSRD 423

Query: 368 GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                  V      Q  L +E   + + +  +SP G+ L    +   D  +K++ +   G
Sbjct: 424 KTA---KVWDLSTGQALLSLEGHSAAVLSVAFSPDGQRLATGSR---DKTAKVWDLS-TG 476

Query: 426 R 426
           R
Sbjct: 477 R 477



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/278 (17%), Positives = 93/278 (33%), Gaps = 21/278 (7%)

Query: 172 DFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            F   + F  +   + +G     L V D                +    FSP+ Q++A  
Sbjct: 193 AFVESVAFSPDGLRLATGSEDKMLKVWDLSTGKALLSLEGHSDAILSVAFSPDGQRLATG 252

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D+       + D+   +A   +    S I +  FS +G+R   +   D    ++ ++ 
Sbjct: 253 SRDN----TAKVWDSTTGKALLTLQGHSSWIYSVAFSPDGQRLA-TGSWDNTAKVWRLN- 306

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
              A   L        S S+SPD  ++V  S         V   N     R  +      
Sbjct: 307 TGKALLSLEGHSAYVSSVSFSPDGQRLVTGS---WDHTAKVWDLNTGKALRNLEGHSDDV 363

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFS 407
           +   +SP G  +A            +      Q  L +E  +    +  +S +G+ L   
Sbjct: 364 WSVAFSPDGQRLATGSRDKTA---KIWDLSTGQALLSLEGHSDAVWSVAFSLNGQRLATG 420

Query: 408 RKKDGDTGSKL----YSIDLNGRNETLINTPAYASDPQ 441
            +        L      + L G +  +++  A++ D Q
Sbjct: 421 SRDKTAKVWDLSTGQALLSLEGHSAAVLSV-AFSPDGQ 457



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 89/263 (33%), Gaps = 19/263 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + +G    +L V D                +    FSP+  ++A  + D      + +
Sbjct: 163 QRLATGSEDKTLKVWDLGTGKALLSLEGHSAFVESVAFSPDGLRLATGSEDK----MLKV 218

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +A   +      IL+  FS +G+R   +  +D    ++       A   L    
Sbjct: 219 WDLSTGKALLSLEGHSDAILSVAFSPDGQRLA-TGSRDNTAKVWD-STTGKALLTLQGHS 276

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++SPD  ++   S         V + N        +   A      +SP G  +
Sbjct: 277 SWIYSVAFSPDGQRLATGS---WDNTAKVWRLNTGKALLSLEGHSAYVSSVSFSPDGQRL 333

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               +      +  +   G   R L     ++ +  +SP G+ L    +   D  +K++ 
Sbjct: 334 VTGSWDHTA-KVWDLNT-GKALRNLEGHSDDVWSVAFSPDGQRLATGSR---DKTAKIWD 388

Query: 421 IDLNGRNETLINTPAYASDPQWV 443
           +      + L++   + SD  W 
Sbjct: 389 LS---TGQALLSLEGH-SDAVWS 407



 Score = 82.8 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 91/279 (32%), Gaps = 39/279 (13%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           +WD+   K ++  +     A  R +A   S D                      + +G  
Sbjct: 596 VWDLSAGKALLSLQ--GHSADVRSVA--FSPD-------------------GRRLATGSW 632

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             +  + D                ++   FSP+ Q++A  + D        + D    +A
Sbjct: 633 DYTAKIWDLSTGQALLSLQGHSDAVWSVSFSPDGQRLATGSRDK----TAKIWDLITGQA 688

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISAS 308
              +      +L+  FS +G+R   +   D  + ++  DL +      L        S +
Sbjct: 689 LLSLEGHSDAVLSVAFSPDGRRLA-TGSWDHTVKVW--DLSTGQALLSLQGHSSWGYSLA 745

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD  ++   S     +   +   +        +    + +  ++SP G  +A      
Sbjct: 746 FSPDGQRLATGSS---DKMAKLWDLSMGQVLLSLEGHSEAIWSVIFSPDGQRLATGSRDN 802

Query: 369 EKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
                 +      Q  L +E  +   ++  +SP G+ L 
Sbjct: 803 TA---KIWDLSTGQALLSLEGHSDAVRSVAFSPHGQRLA 838



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 112/313 (35%), Gaps = 35/313 (11%)

Query: 132 DVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           D+  + QI + +   +S     + AH   DD             +R L  +         
Sbjct: 87  DLAYKSQIALKEGDRTSAYRLAEFAHRYVDD--------HNLNVTRALVGALYFNDLNQD 138

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L  ++ +G             +    FSP+ Q++A  + D      + + D    +A 
Sbjct: 139 PLLWTLNLEG---------HSDAVRSVAFSPDGQRLATGSEDK----TLKVWDLGTGKAL 185

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             +    + + +  FS +G R   +  +D+ + ++ +     A   L       +S ++S
Sbjct: 186 LSLEGHSAFVESVAFSPDGLRLA-TGSEDKMLKVWDLS-TGKALLSLEGHSDAILSVAFS 243

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD  ++     R+   +++   S         Q   +  +   +SP G  +A   +    
Sbjct: 244 PDGQRLA-TGSRDNTAKVW--DSTTGKALLTLQGHSSWIYSVAFSPDGQRLATGSWDNTA 300

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             +  +    +   L    + + + ++SP G+ L+       D  +K++ ++     + L
Sbjct: 301 -KVWRLNTGKALLSLEGHSAYVSSVSFSPDGQRLVTGSW---DHTAKVWDLN---TGKAL 353

Query: 431 INTPAYASDPQWV 443
            N   ++ D  W 
Sbjct: 354 RNLEGHSDD-VWS 365



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 51/354 (14%), Positives = 113/354 (31%), Gaps = 36/354 (10%)

Query: 108  AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSS-------PASWRKIAH 156
            +  +++     +G            ++WD+   + ++  +  SS           +++A 
Sbjct: 696  SDAVLSVAFSPDGRRLATGSWDHTVKVWDLSTGQALLSLQGHSSWGYSLAFSPDGQRLAT 755

Query: 157  TISD-----------DIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIR 204
              SD            +  S+ G      S I     + + +G   N+  + D       
Sbjct: 756  GSSDKMAKLWDLSMGQVLLSLEGHSEAIWSVIFSPDGQRLATGSRDNTAKIWDLSTGQAL 815

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                     +    FSP+ Q++A  ++D        + D    +A   +      +L+  
Sbjct: 816  LSLEGHSDAVRSVAFSPHGQRLATGSWDH----TAKVWDLSTGKALLSLKGHSDAVLSVA 871

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS +G+R   +   D    ++ ++    A   L        S ++SPD  ++   S    
Sbjct: 872  FSPDGQRLA-TGSSDHTAKVWDLN-TGQALLSLEGHSDAVWSVAFSPDGQRLATGSS--- 926

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                 V   +        Q    +     +S  G  +A T    +   +  +    +   
Sbjct: 927  DHMAKVWDLSTGQALLSLQGHSEAVLSVAFSHDGQRLA-TGSEDKTTKLWDLSMGKALLS 985

Query: 385  LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY---SIDLNGRNETLINTPA 435
            L      + +  +SP G+ L    +        +    S+ ++GR   L    +
Sbjct: 986  LQGHSEAVLSVAFSPDGQRLATGSRDKTTKVWDMVPPKSLTIDGREFKLFGLNS 1039



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 13/194 (6%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      + +  FS +G+R   +  +D+ + ++ +     A   L        S ++SPD
Sbjct: 146 LEGHSDAVRSVAFSPDGQRLA-TGSEDKTLKVWDL-GTGKALLSLEGHSAFVESVAFSPD 203

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             ++   S+    + L V   +        +    +     +SP G  +A          
Sbjct: 204 GLRLATGSE---DKMLKVWDLSTGKALLSLEGHSDAILSVAFSPDGQRLATGSRDNTA-- 258

Query: 373 IGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             V      +  L +    S + +  +SP G+ L        D  +K++ ++      +L
Sbjct: 259 -KVWDSTTGKALLTLQGHSSWIYSVAFSPDGQRLATGSW---DNTAKVWRLNTGKALLSL 314

Query: 431 INTPAYASDPQWVG 444
               AY S   +  
Sbjct: 315 EGHSAYVSSVSFSP 328


>gi|171689846|ref|XP_001909863.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944885|emb|CAP70997.1| unnamed protein product [Podospora anserina S mat+]
          Length = 228

 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 81/221 (36%), Gaps = 12/221 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG   N++ + D    +           +    FSP+ Q+VA  + D      + +
Sbjct: 19  QRVASGSHDNTIKIWDTASGSSTQTLEGHGGSVLSVAFSPDGQRVASGSSDR----TIKI 74

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +     ++ +  FS +G+R   S   D  + I+  D  S ++ + L   
Sbjct: 75  WDTASGSCTQTLEGHGDLVWSVAFSPDGQRVA-SGSHDNTIKIW--DTASGSSTQTLEGH 131

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             + +S ++SPD  ++   S       + +  +      +  +    S     +SP G  
Sbjct: 132 GSLVLSVAFSPDGQRVASGSH---DNTIKIWDTASGSSTQTLEGHGGSVLSVAFSPDGQR 188

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           +A +        I         + L     ++ +  +SP G
Sbjct: 189 VA-SGSDDRTIKIWDTASGSCTQTLEGHGGSVWSVAFSPDG 228



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 83/240 (34%), Gaps = 15/240 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                  ++    FSP+ Q+VA  ++D+     + + DT    + + +      +L+  F
Sbjct: 1   TLEGYGSLVLSVAFSPDGQRVASGSHDN----TIKIWDTASGSSTQTLEGHGGSVLSVAF 56

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREG 324
           S +G+R   S   D  + I+  D  S +  + L     +  S ++SPD  ++   S    
Sbjct: 57  SPDGQRVA-SGSSDRTIKIW--DTASGSCTQTLEGHGDLVWSVAFSPDGQRVASGSH--- 110

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +  +      +  +   +      +SP G  +A          I       S + 
Sbjct: 111 DNTIKIWDTASGSSTQTLEGHGSLVLSVAFSPDGQRVASGSHDNT-IKIWDTASGSSTQT 169

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           L     ++ +  +SP G+ +        D   K++        +TL           +  
Sbjct: 170 LEGHGGSVLSVAFSPDGQRVASGSD---DRTIKIWDTASGSCTQTLEGHGGSVWSVAFSP 226


>gi|126465321|ref|YP_001040430.1| peptidase S9 prolyl oligopeptidase [Staphylothermus marinus F1]
 gi|126014144|gb|ABN69522.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Staphylothermus marinus F1]
          Length = 650

 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 101/273 (36%), Gaps = 38/273 (13%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN--QQKVAYATYD 232
            +I F   S+     +    +   D +   Y   ++      P   P+   +K+A+ +  
Sbjct: 23  DKIFFTLTSINMDKDRYETNIWLYDLSTNNYAPITKGPTDQSPE--PDRRGEKLAFISRR 80

Query: 233 -----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                ++    +Y++D +  R P+ +  F+  +    +S +GK  L  + + E  +    
Sbjct: 81  DAESENDRGNGIYILDLKYSREPRLVAWFKGGVRRIEWSPDGKYLLAIINEGEPEE---- 136

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                      +   I+    +  +    V+         L ++  +  + ++I+  K  
Sbjct: 137 -----------DVKHIDDMPVWF-NGVGFVYNM----SSHLIILDPDSGEYEKITSGK-I 179

Query: 348 SYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGR 402
                 WS  G  IA+T    + +     + +      ++R+L+E+ +    P WSP  +
Sbjct: 180 FVRSASWSNNGRYIAYTLSKDRVNPYLSELHIYDLVEKKDRVLLENITTYFTPAWSPDDK 239

Query: 403 SLIFS---RKKDGDTGSKLYSIDLNGRNETLIN 432
            +      R++   T  K+Y I+ +   E  I 
Sbjct: 240 YVALIFHRRERGFSTHYKVYLINTDTGEEKCIT 272



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 77/226 (34%), Gaps = 41/226 (18%)

Query: 259 MILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           ++ +P  + NG +   ++            +I+  DL +N    +T     + S      
Sbjct: 12  IVSSPIITVNGDKIFFTLTSINMDKDRYETNIWLYDLSTNNYAPITKGP-TDQSPEPDRR 70

Query: 313 SSQIVFESDRE------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--- 363
             ++ F S R+          +Y++    S + R+    +       WSP G  +     
Sbjct: 71  GEKLAFISRRDAESENDRGNGIYILDLKYSREPRLVAWFKGGVRRIEWSPDGKYLLAIIN 130

Query: 364 ---------------TKFSGEKF------AIGVMKKDGSQERLLVEDS-NLQAPTWSPSG 401
                            F+G  F       + ++  D  +   +      +++ +WS +G
Sbjct: 131 EGEPEEDVKHIDDMPVWFNGVGFVYNMSSHLIILDPDSGEYEKITSGKIFVRSASWSNNG 190

Query: 402 RSLIF--SRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
           R + +  S+ +     S+L+  DL   ++  L+        P W  
Sbjct: 191 RYIAYTLSKDRVNPYLSELHIYDLVEKKDRVLLENITTYFTPAWSP 236


>gi|17232326|ref|NP_488874.1| WD repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17133971|dbj|BAB76533.1| WD-repeat protein [Nostoc sp. PCC 7120]
          Length = 1551

 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 87/238 (36%), Gaps = 24/238 (10%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             P     +++  FSP+ Q +A A+ D    L              R    + ++ + RFS
Sbjct: 1113 FPGHQDCVWDVSFSPDSQYIATASSDGTSRLW-----NLAGEQITRFRGHQGVVWSVRFS 1167

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             NG+    +   D    ++  +L      + +       S S+SPD   I   +  +   
Sbjct: 1168 PNGQYIA-TTSSDRTARVW--NLNGQQLAQFSGHQDYVRSVSFSPDGKYIA-TASSDRTV 1223

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RL 385
            +L+ +      Q    Q  +++     +SP G  +     + +   + +    G +  + 
Sbjct: 1224 RLWHLN---KQQFSAFQGHQSTVRSVDFSPDGQKVV---TAADDRTVRLWNIKGEELLQF 1277

Query: 386  LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            L     + + ++SP G+ +  +     D   +L+  D+ G  + L   P +     W 
Sbjct: 1278 LGHRGKVWSVSFSPDGKYIATTSS---DRTVRLW--DITG--QLLQQFPGHQGT-VWS 1327



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 85/246 (34%), Gaps = 28/246 (11%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                +  ++   FSP+ + +A A+ D    L  +       +   +    +  + +  FS
Sbjct: 990  LQGHEDTIWSANFSPDGKYIATASSDRTARLWNF-----SGQQLAKFQGHQGYVRSVSFS 1044

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             +GK    +   D    ++S         +           S+SPD   I   +D     
Sbjct: 1045 PDGKHIA-TAGDDHTARLWSF--SGQQLVQFPGHQGTVWCISFSPDGKHIATAAD---DR 1098

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERL 385
             + +    G    R     +   +D  +SP    IA     G      +    G Q  R 
Sbjct: 1099 IVRLWNLKGKLLVRF-PGHQDCVWDVSFSPDSQYIATASSDGTS---RLWNLAGEQITRF 1154

Query: 386  LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL-------INTPAYAS 438
                  + +  +SP+G+ +  +     D  ++++  +LNG+           + + +++ 
Sbjct: 1155 RGHQGVVWSVRFSPNGQYIATTSS---DRTARVW--NLNGQQLAQFSGHQDYVRSVSFSP 1209

Query: 439  DPQWVG 444
            D +++ 
Sbjct: 1210 DGKYIA 1215



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 77/217 (35%), Gaps = 22/217 (10%)

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + + +A   Y     L          +   +    ++ + +  FS +G+  L +   D  
Sbjct: 920  DGRSLA--KYPATSPLLALQTILDNIQERNQFQGHQAWVRSVSFSRDGQYIL-TASDDCT 976

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-FESDREGKEQLYVMQSNGSDQKR 340
              ++  +LQ      L        SA++SPD   I    SDR  +    +   +G    +
Sbjct: 977  ARLW--NLQGKQLISLQGHEDTIWSANFSPDGKYIATASSDRTAR----LWNFSGQQLAK 1030

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
              Q  +       +SP G  IA    +G+     +    G Q          +   ++SP
Sbjct: 1031 F-QGHQGYVRSVSFSPDGKHIA---TAGDDHTARLWSFSGQQLVQFPGHQGTVWCISFSP 1086

Query: 400  SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             G+ +  +     D   +L+++    + + L+  P +
Sbjct: 1087 DGKHIATAAD---DRIVRLWNL----KGKLLVRFPGH 1116



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 62/382 (16%), Positives = 130/382 (34%), Gaps = 66/382 (17%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVL-------VTGRVIKEGKDRLRVE------F 128
            +S     Q I    S    + WN  G Q+        V   V      +           
Sbjct: 1123 VSFSPDSQYIATASSDGTSRLWNLAGEQITRFRGHQGVVWSVRFSPNGQYIATTSSDRTA 1182

Query: 129  RLWDVKDRK--QIIGKK-------------FFSSPASWR--KIAH----TISDDIYQSIT 167
            R+W++  ++  Q  G +             + ++ +S R  ++ H      S       T
Sbjct: 1183 RVWNLNGQQLAQFSGHQDYVRSVSFSPDGKYIATASSDRTVRLWHLNKQQFSAFQGHQST 1242

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                DF+       + VV+     ++ + +  G  +      R ++ +   FSP+ + +A
Sbjct: 1243 VRSVDFSPD----GQKVVTAADDRTVRLWNIKGEELLQFLGHRGKV-WSVSFSPDGKYIA 1297

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D      V L D    +  ++    +  + +  FS +G+    +   D    ++S+
Sbjct: 1298 TTSSDR----TVRLWDI-TGQLLQQFPGHQGTVWSVSFSPDGQHIA-TASSDLTTRLWSL 1351

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            D       +           S+S +   I   +D +   +L+     G    +     ++
Sbjct: 1352 D--GQELMQFKGHDKWVRYVSFSCNGQHIATAAD-DCTARLW--NLAGRQVGQFL-GHQS 1405

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRS 403
              +   +SP    +       E     +   DG   +++ E    QAP     +S +G+ 
Sbjct: 1406 IVWSVNFSPDCQYLVTAS---EDHTAKLWTLDG---QIVTEFRGHQAPVKSAVFSHNGQY 1459

Query: 404  LIFSRKKDGDTGSKLYSIDLNG 425
            +  S     D  ++L+  +LNG
Sbjct: 1460 IATSSD---DRTARLW--NLNG 1476



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 80/276 (28%), Gaps = 47/276 (17%)

Query: 80   NLISQDSFKQKITNPDSIPRFQDWNSLGAQVL-VTG------RVIKEGKDRLRVE----- 127
              +      QK+         + WN  G ++L   G       V      +         
Sbjct: 1244 RSVDFSPDGQKVVTAADDRTVRLWNIKGEELLQFLGHRGKVWSVSFSPDGKYIATTSSDR 1303

Query: 128  -FRLWDVKDR--KQIIGKKFFS-----SPASWRKIAHTISD-----------DIYQSITG 168
              RLWD+  +  +Q  G +        SP     IA   SD           ++ Q    
Sbjct: 1304 TVRLWDITGQLLQQFPGHQGTVWSVSFSPDGQH-IATASSDLTTRLWSLDGQELMQFKGH 1362

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            +K           + + +     +  + +  G  +         I++   FSP+ Q +  
Sbjct: 1363 DKWVRYVSFSCNGQHIATAADDCTARLWNLAGRQVGQFL-GHQSIVWSVNFSPDCQYLVT 1421

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSNGKRALISVQKDEAMDIY 285
            A+ D                  + +  FR       +  FS NG+    +   D    ++
Sbjct: 1422 ASEDH--------TAKLWTLDGQIVTEFRGHQAPVKSAVFSHNGQYIA-TSSDDRTARLW 1472

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +L      +         S S SPD   I   SD
Sbjct: 1473 --NLNGQQLAQFKGHKGAVRSISISPDDQYIATASD 1506


>gi|294141915|ref|YP_003557893.1| protease [Shewanella violacea DSS12]
 gi|293328384|dbj|BAJ03115.1| protease, putative [Shewanella violacea DSS12]
          Length = 1094

 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 116/302 (38%), Gaps = 46/302 (15%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---- 228
           +++R+ F+S+S  +      +  M   G + +  T   D  +   R   +  ++ +    
Sbjct: 225 WDNRLYFISDSDGNDN----IWSMTLAGKDFKQHTQFTDWQVRGARI--DNGRIVFQQGA 278

Query: 229 ------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----- 277
                    +    L + L+     R    + +      + R S +G + +I+ +     
Sbjct: 279 DIKLYDIAANSSHTLDIKLVSDFPQRREHWVNDPMKYATSTRLSPSGNKVVITARSHVAV 338

Query: 278 -KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              +   +  + L  N+  R         +A  SPD   +   SD  G+++++   ++G 
Sbjct: 339 AGTDGSRLVEIALPGNSRIR---------NAVMSPDGKWVYGISDASGEQEIWRFPADGG 389

Query: 337 D-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +  K+++ +          SP G  IA   + G    I ++    ++ + ++       P
Sbjct: 390 NGAKQLTDNGHTLRMSLSVSPDGRYIASDDYDG---NIWLLDLRNNRHKKIITRGEGLGP 446

Query: 396 ----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLIN------TPAYASDPQWVG 444
                WS   R +  ++ + G +  K+    L   R ETL +      +PA+++D  W+ 
Sbjct: 447 YADIVWSGDSRFMALTKSEIGKSRPKIVLYSLAKQRAETLTSDKYESYSPAFSTDGNWLY 506

Query: 445 FM 446
           F+
Sbjct: 507 FL 508



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 72/223 (32%), Gaps = 15/223 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
               +      +     R SP+  KV            V +  T   R  +      S I
Sbjct: 303 QRREHWVNDPMKYATSTRLSPSGNKVVITARSH-----VAVAGTDGSRLVEIALPGNSRI 357

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLT-NTLFINISASYSPDSSQIVF 318
                S +GK            +I+          ++LT N   + +S S SPD   I  
Sbjct: 358 RNAVMSPDGKWVYGISDASGEQEIWRFPADGGNGAKQLTDNGHTLRMSLSVSPDGRYIA- 416

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTK--FSGEKFAIG 374
             D +G   ++++    +  K+I    E    Y D VWS     +A TK      +  I 
Sbjct: 417 SDDYDGN--IWLLDLRNNRHKKIITRGEGLGPYADIVWSGDSRFMALTKSEIGKSRPKIV 474

Query: 375 VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           +      +   L  D     +P +S  G  L F   +  ++  
Sbjct: 475 LYSLAKQRAETLTSDKYESYSPAFSTDGNWLYFLSDRQFNSTP 517



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 67/193 (34%), Gaps = 22/193 (11%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +R+ +  +  L    S +G         + + ++Y + +     +R++          ++
Sbjct: 62  QRLTSLPAQELGASVSKDGNWVAYVANYEGSSEVYVIPITGGQAKRISFENSRVRVQGWT 121

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
            D   +    +  G    +V++S   +         A   +     +G+ + FT+F    
Sbjct: 122 ADGQVLYGTDNALGPANYWVLRSVNPETLETQDLPLADAIEGTIDDKGEYLYFTRFGLQA 181

Query: 367 ---------SGEKFAIGVMKKDGSQE-RLLVED--SNLQAPT-WSPSGRSLIFSRKKDGD 413
                     G K  +   K     E + L  D   +++ P  W    R L F    DG 
Sbjct: 182 TGDNAKVYRGGAKGELWRFKLGSKVEAQRLTSDHTGSVRQPMLW--DNR-LYFISDSDG- 237

Query: 414 TGSKLYSIDLNGR 426
               ++S+ L G+
Sbjct: 238 -NDNIWSMTLAGK 249


>gi|229494573|ref|ZP_04388336.1| beta-lactamase family protein/peptidase S9 domain protein
           [Rhodococcus erythropolis SK121]
 gi|229318935|gb|EEN84793.1| beta-lactamase family protein/peptidase S9 domain protein
           [Rhodococcus erythropolis SK121]
          Length = 1122

 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 64/190 (33%), Gaps = 37/190 (19%)

Query: 264 RFSSNGKRALISVQ----KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             S +G   +              +++V   S    RLT     + +  +SPD + I F 
Sbjct: 21  SISPDGTVVVFVRSEIVAGKATTSLWAVSRDS-QARRLTAGPA-DSAPRFSPDGTSIAFL 78

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFT------------- 364
                  QL+++   G + + ++             WSP G+ IAF              
Sbjct: 79  RKVGDSAQLHLIPLAGGEAETLTTSASLPLGAGAAAWSPDGNAIAFAAVVSRSDSTDPNA 138

Query: 365 ---------KFSGEKF------AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR 408
                    K  G  +       +  +  +    R L + D N   P+WSP G +L F+ 
Sbjct: 139 PIVTDRLGYKVDGAGWLGTFRRHLHTVDLETKAVRRLTDGDWNADVPSWSPDGTALAFTA 198

Query: 409 KKDGDTGSKL 418
             + D+   L
Sbjct: 199 NLEPDSDLNL 208



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 89/243 (36%), Gaps = 44/243 (18%)

Query: 160 DDIYQSITGEKGDFN---SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           DD+++ +T  +   +   + ++FV   +V+G    SL  + RD    R      D     
Sbjct: 9   DDLHRVVTPTETSISPDGTVVVFVRSEIVAGKATTSLWAVSRDSQARRLTAGPADSA--- 65

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALI 274
           PRFSP+   +A+      D  +++L+      A     +        A  +S +G     
Sbjct: 66  PRFSPDGTSIAFLR-KVGDSAQLHLIPLAGGEAETLTTSASLPLGAGAAAWSPDGNAIAF 124

Query: 275 SV---------------------QKDEAMDI-------YSVDLQSNATERLTNTLFINIS 306
           +                      + D A  +       ++VDL++ A  RLT+  +    
Sbjct: 125 AAVVSRSDSTDPNAPIVTDRLGYKVDGAGWLGTFRRHLHTVDLETKAVRRLTDGDWNADV 184

Query: 307 ASYSPDSSQIVFESDREGKEQLY-------VMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            S+SPD + + F ++ E    L        ++  + S   +            +W PQGD
Sbjct: 185 PSWSPDGTALAFTANLEPDSDLNLTFSAYRILVDDLSVPPQRLGHATGVQGSTLWHPQGD 244

Query: 360 LIA 362
            + 
Sbjct: 245 SVV 247



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 9/99 (9%)

Query: 353 VWSPQGDLIAFTKFS----GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             SP G ++ F +          ++  + +D SQ R L       AP +SP G S+ F R
Sbjct: 21  SISPDGTVVVFVRSEIVAGKATTSLWAVSRD-SQARRLTAGPADSAPRFSPDGTSIAFLR 79

Query: 409 KKDGDTGSKLYSIDLNGRNETLINT---PAYASDPQWVG 444
           K        L  +   G  ETL  +   P  A    W  
Sbjct: 80  KVGDSAQLHLIPL-AGGEAETLTTSASLPLGAGAAAWSP 117


>gi|313887043|ref|ZP_07820742.1| peptidase, S9A/B/C family, catalytic domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923454|gb|EFR34264.1| peptidase, S9A/B/C family, catalytic domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 702

 Score = 94.3 bits (233), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 58/362 (16%), Positives = 118/362 (32%), Gaps = 84/362 (23%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R   H+IS      +   +  F S +  +  +        +L +  + G+         +
Sbjct: 6   RPFLHSIS----FYLMTRRNLFRSLVALILST-------FALPMTAQQGSKQMTP----E 50

Query: 212 QILFEPRF-----SPNQQKVAY-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
            +L  PR      +P+ ++V Y     +  D+     +YL+++      +          
Sbjct: 51  MLLTMPRVGSYALAPDGKQVIYNVSQPSIKDNNSRTSIYLINSDGSGRTELTAPSAGSEY 110

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            PR+S +GK+       D+ M +++  L      +LT      +   +SPD + +++  D
Sbjct: 111 TPRWSRDGKQIYFMRGTDQGMQLFARTLSDGVERQLTAIDGGIVDYLFSPDETTLLYVQD 170

Query: 322 REGKEQLYVM--QSNGSDQK----------------------------RISQDKEASYFD 351
            + +  +  +    + +D +                             I++  +    +
Sbjct: 171 IKARPVVTDVYPDLDKADARIIEDLMYKHWDEWVSTMPHPFIAKVTAQPITKGLDLLEGE 230

Query: 352 P--------------VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED 389
           P               +SP G+LIA+                 I +      +   + E 
Sbjct: 231 PYEAPMRPFNGIEDIAFSPDGNLIAYACRKKTGLEYSLSTNSDIYLYNVSTGETTNVSEG 290

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKL---YSIDLNGRNETLINTP--AYASDPQW 442
                  P +SP GRSLI+   +     S L   Y  DL  +    +        S+P W
Sbjct: 291 IMGYDTHPVFSPDGRSLIWIGMEHDGYESDLQVMYLYDLAKKQYRPLTADFEYNISNPTW 350

Query: 443 VG 444
             
Sbjct: 351 SA 352



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 103/313 (32%), Gaps = 65/313 (20%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            S+     + S+ +++ DG+    LT       + PR+S + +++ +    D+ +     
Sbjct: 77  PSIKDNNSRTSIYLINSDGSGRTELTAPSAGSEYTPRWSRDGKQIYFMRGTDQGMQ--LF 134

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-------------------------- 275
             T  D   +++      I+   FS +    L                            
Sbjct: 135 ARTLSDGVERQLTAIDGGIVDYLFSPDETTLLYVQDIKARPVVTDVYPDLDKADARIIED 194

Query: 276 -VQKDEAMDIYSVD---LQSNATERLTNTLF-INISA--------------SYSPDSSQI 316
            + K     + ++    +     + +T  L  +                  ++SPD + I
Sbjct: 195 LMYKHWDEWVSTMPHPFIAKVTAQPITKGLDLLEGEPYEAPMRPFNGIEDIAFSPDGNLI 254

Query: 317 VFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +                 +Y+   +  +   +S+        PV+SP G  + +     
Sbjct: 255 AYACRKKTGLEYSLSTNSDIYLYNVSTGETTNVSEGIMGYDTHPVFSPDGRSLIWIGMEH 314

Query: 369 EKFA-----IGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +      + +      Q R L  D   N+  PTWS   +++ F   +  +  + LYS 
Sbjct: 315 DGYESDLQVMYLYDLAKKQYRPLTADFEYNISNPTWSADSKTIYFITCR--EALTHLYSY 372

Query: 422 DL-NGRNETLINT 433
            L NG+ + + + 
Sbjct: 373 QLANGKIKQITDG 385



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/323 (13%), Positives = 104/323 (32%), Gaps = 37/323 (11%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D KQI   +   +    +  A T+SD + + +T   G     +    E+ +  +      
Sbjct: 117 DGKQIYFMR--GTDQGMQLFARTLSDGVERQLTAIDGGIVDYLFSPDETTLLYVQDIKAR 174

Query: 195 VM------DRDGANIRYLT-----PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +      D D A+ R +         + +   P          +        +   L  
Sbjct: 175 PVVTDVYPDLDKADARIIEDLMYKHWDEWVSTMP--------HPFIAKVTAQPITKGLDL 226

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATE 295
              +     +  F  +     FS +G     + +K            DIY  ++ +  T 
Sbjct: 227 LEGEPYEAPMRPFNGIEDI-AFSPDGNLIAYACRKKTGLEYSLSTNSDIYLYNVSTGETT 285

Query: 296 RLTNT-LFINISASYSPDSSQIVFES-DREGKEQ----LYVMQSNGSDQKRISQDKEASY 349
            ++   +  +    +SPD   +++   + +G E     +Y+        + ++ D E + 
Sbjct: 286 NVSEGIMGYDTHPVFSPDGRSLIWIGMEHDGYESDLQVMYLYDLAKKQYRPLTADFEYNI 345

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            +P WS     I F         +   +    + + + +        +  +   +  + +
Sbjct: 346 SNPTWSADSKTIYFITCREALTHLYSYQLANGKIKQITDGQYDYT-GFDMNAEGVCVASR 404

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           +     ++LY ++L     T + 
Sbjct: 405 QSMTYPTELYMVNLKNGKATALT 427


>gi|145476893|ref|XP_001424469.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124391533|emb|CAK57071.1| unnamed protein product [Paramecium tetraurelia]
          Length = 784

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 98/293 (33%), Gaps = 39/293 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  +Q                 H  S  +Y       G     
Sbjct: 493 TTLASGSDDNSIRLWDVKTGQQKAKLD-----------GH--SSTVYSVNFSPDG----- 534

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG + NS+ + D      +         +    FSP+   +A  + D+   
Sbjct: 535 -----TTLASGSLDNSIRLWDVKTGQQKAKLDGHSSTVNSVNFSPDGTTLASGSLDN--- 586

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D +  +   ++    S + +  FS +G     S   D ++ ++  D+++   + 
Sbjct: 587 -SIRLWDVKTGQQKAKLDGHSSTVNSVNFSPDGTTLA-SGSLDNSIRLW--DVKTGQQKA 642

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L        S ++SPD + +   S       + +       QK       ++     +S
Sbjct: 643 KLDGHSSTVNSVNFSPDGTTLASGSL---DNSIRLWDVKTGQQKAKLDGHSSTVNSVNFS 699

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIF 406
           P G  +A          I +      Q++  ++   S + +  +SP G  L F
Sbjct: 700 PDGTTLASGSLDNS---IRLWDVKTGQQKAKLDGHSSTVNSVNFSPDGTILSF 749



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 92/251 (36%), Gaps = 19/251 (7%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ SG   NS+ + D      +         ++   FSP+   +A  + D+     + L 
Sbjct: 494 TLASGSDDNSIRLWDVKTGQQKAKLDGHSSTVYSVNFSPDGTTLASGSLDN----SIRLW 549

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTL 301
           D +  +   ++    S + +  FS +G     S   D ++ ++  D+++   + +L    
Sbjct: 550 DVKTGQQKAKLDGHSSTVNSVNFSPDGTTLA-SGSLDNSIRLW--DVKTGQQKAKLDGHS 606

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++SPD + +   S       + +       QK       ++     +SP G  +
Sbjct: 607 STVNSVNFSPDGTTLASGSL---DNSIRLWDVKTGQQKAKLDGHSSTVNSVNFSPDGTTL 663

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           A          I +      Q++  ++   S + +  +SP G +L        D   +L+
Sbjct: 664 ASGSLDNS---IRLWDVKTGQQKAKLDGHSSTVNSVNFSPDGTTLA---SGSLDNSIRLW 717

Query: 420 SIDLNGRNETL 430
            +    +   L
Sbjct: 718 DVKTGQQKAKL 728



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 90/256 (35%), Gaps = 21/256 (8%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              +S+ + D     ++      +  ++   FSP+   +A           + L   +  
Sbjct: 6   SYDSSIYLWDVKSRELKQKLEGHNGTVWSISFSPDGSTLA----SGGRDKSIRLWYVQTG 61

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL----QSNATERLTNTLFI 303
           +   ++      +L+  FS NG     S   D+++ I+ V++                  
Sbjct: 62  KQKAQLEGHTCGVLSVSFSPNGTTLA-SSSGDKSIRIWDVNIVHDKSGGY-----GHSNY 115

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S  YSPD + +   S   G + + +       +++I +   +  F   +S  G L+A 
Sbjct: 116 VRSVCYSPDDTLLASGS---GDKTIRLWDVKTGQERQILKGHCSEIFQVCFSKDGTLLA- 171

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +    +   +  +K    + RL   +  +   ++S  G +L       GD   +L+ I  
Sbjct: 172 SGSRDKSIRLWDIKTGEEKYRLEGHNGYVSTISFSFDGITLA---SGSGDKTIRLWDIIT 228

Query: 424 NGRNETLINTPAYASD 439
               + L     Y S 
Sbjct: 229 GKEIQRLEGHNGYVSS 244



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 89/248 (35%), Gaps = 15/248 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D      R +       +F+  FS +   +A  + D      + L D +
Sbjct: 130 SGSGDKTIRLWDVKTGQERQILKGHCSEIFQVCFSKDGTLLASGSRDK----SIRLWDIK 185

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+      +    FS +G     S   D+ + ++ + +     +RL        
Sbjct: 186 TGEEKYRLEGHNGYVSTISFSFDGITLA-SGSGDKTIRLWDI-ITGKEIQRLEGHNGYVS 243

Query: 306 SASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S  +SPD    +F     G+++ + +  +    Q           +   +SP G+L+A +
Sbjct: 244 SVCFSPD----IFTLASCGEDKCIRLWNAKTGQQASQFFGHTHQVYSICFSPNGNLLA-S 298

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               +   +  +K+     +L      + +  +SP G +++       D   +L+ +   
Sbjct: 299 GSDDKSIRLWDVKEGQQISKLQGHSGGVISVCFSPDGTTIL---SGSADQSIRLWDVKSG 355

Query: 425 GRNETLIN 432
            +   LI 
Sbjct: 356 QQQSKLIG 363



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 58/318 (18%), Positives = 115/318 (36%), Gaps = 33/318 (10%)

Query: 127 EFRLWDVKDRKQ---IIGKK-------FFSSPASWRKIAHTISDDIYQSITG-EKGDFNS 175
             RLWDVK  +Q   +IG K       F     +    ++  S  I+++I   +K   NS
Sbjct: 346 SIRLWDVKSGQQQSKLIGHKCGVYSVCFSQKGTNVASGSYDQSIRIWETIKRFDKKQINS 405

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
             +  SE   +    N       D   ++    + D +     FS      A+    +E 
Sbjct: 406 LKVSRSEKKTNFTDINQNIHFKADQQKVKLYDNNDDFL----SFSSIGTTKAF---GNEG 458

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +YL D +  +   ++    S + +  FS +G     S   D ++ ++  D+++   +
Sbjct: 459 NNSIYLRDVKTGQQKAKLDGHSSAVWSVNFSPDGTTLA-SGSDDNSIRLW--DVKTGQQK 515

Query: 296 -RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +L        S ++SPD + +   S       + +       QK       ++     +
Sbjct: 516 AKLDGHSSTVYSVNFSPDGTTLASGSL---DNSIRLWDVKTGQQKAKLDGHSSTVNSVNF 572

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDG 412
           SP G  +A          I +      Q++  ++   S + +  +SP G +L        
Sbjct: 573 SPDGTTLASGSLDNS---IRLWDVKTGQQKAKLDGHSSTVNSVNFSPDGTTLA---SGSL 626

Query: 413 DTGSKLYSIDLNGRNETL 430
           D   +L+ +    +   L
Sbjct: 627 DNSIRLWDVKTGQQKAKL 644



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 90/280 (32%), Gaps = 37/280 (13%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWDVK  ++             R+I      +I+Q    + G              SG
Sbjct: 137 IRLWDVKTGQE-------------RQILKGHCSEIFQVCFSKDGTLL----------ASG 173

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               S+ + D      +Y     +  +    FS +   +A  + D      + L D    
Sbjct: 174 SRDKSIRLWDIKTGEEKYRLEGHNGYVSTISFSFDGITLASGSGDK----TIRLWDIITG 229

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSN-ATERLTNTLFINI 305
           +  +R+      + +  FS +    + ++          + + ++     +         
Sbjct: 230 KEIQRLEGHNGYVSSVCFSPD----IFTLASCGEDKCIRLWNAKTGQQASQFFGHTHQVY 285

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S  +SP+ + +   SD    + + +       Q    Q          +SP G  I  + 
Sbjct: 286 SICFSPNGNLLASGSD---DKSIRLWDVKEGQQISKLQGHSGGVISVCFSPDGTTIL-SG 341

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            + +   +  +K    Q +L+     + +  +S  G ++ 
Sbjct: 342 SADQSIRLWDVKSGQQQSKLIGHKCGVYSVCFSQKGTNVA 381



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 107/331 (32%), Gaps = 61/331 (18%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWD+   K+I  ++          +    S DI+                   ++ S 
Sbjct: 221 IRLWDIITGKEI--QRLEGHNGYVSSVC--FSPDIF-------------------TLASC 257

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + + +                ++   FSPN   +A  + D      + L D +  
Sbjct: 258 GEDKCIRLWNAKTGQQASQFFGHTHQVYSICFSPNGNLLASGSDDK----SIRLWDVKEG 313

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINIS 306
           +   ++      +++  FS +G   L S   D+++ ++  D++S   + +L        S
Sbjct: 314 QQISKLQGHSGGVISVCFSPDGTTIL-SGSADQSIRLW--DVKSGQQQSKLIGHKCGVYS 370

Query: 307 ASYSPDSSQIVFESD-----------REGKEQLYVMQSNGSDQKRISQDKEASYFDPV-- 353
             +S   + +   S            R  K+Q+  ++ + S++K    D   +       
Sbjct: 371 VCFSQKGTNVASGSYDQSIRIWETIKRFDKKQINSLKVSRSEKKTNFTDINQNIHFKADQ 430

Query: 354 --------------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                         +S  G   AF         +  +K    + +L    S + +  +SP
Sbjct: 431 QKVKLYDNNDDFLSFSSIGTTKAFGNEGNNSIYLRDVKTGQQKAKLDGHSSAVWSVNFSP 490

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            G +L        D   +L+ +    +   L
Sbjct: 491 DGTTLASGSD---DNSIRLWDVKTGQQKAKL 518



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 75/221 (33%), Gaps = 16/221 (7%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ SG    S+ +        +         +    FSPN   +A ++ D      + + 
Sbjct: 43  TLASGGRDKSIRLWYVQTGKQKAQLEGHTCGVLSVSFSPNGTTLASSSGDK----SIRIW 98

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D  I           + + +  +S +    L S   D+ + ++  D+++    ++     
Sbjct: 99  DVNIVHDKSGGYGHSNYVRSVCYSPD-DTLLASGSGDKTIRLW--DVKTGQERQILKGHC 155

Query: 303 INISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             I    +S D + +   S     + + +      ++K   +          +S  G  I
Sbjct: 156 SEIFQVCFSKDGTLLASGSR---DKSIRLWDIKTGEEKYRLEGHNGYVSTISFSFDG--I 210

Query: 362 AFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPS 400
                SG+K  I +      +E  RL   +  + +  +SP 
Sbjct: 211 TLASGSGDK-TIRLWDIITGKEIQRLEGHNGYVSSVCFSPD 250


>gi|218442190|ref|YP_002380519.1| hypothetical protein PCC7424_5303 [Cyanothece sp. PCC 7424]
 gi|218174918|gb|ACK73651.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 1656

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 110/310 (35%), Gaps = 30/310 (9%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            D K I    +  +   W +    +S       T       + + F  +  V         
Sbjct: 1080 DGKVIASASYDKTVKLWNESGKLLS-------TLSHDYRVTHVAFSPDGKVIASASWDST 1132

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            V   +G+     T S D  ++   FSP+ + +A A++D      V L +           
Sbjct: 1133 VKLWNGSGKLLSTLSHDDYVYHVAFSPDGKVIASASFDK----TVKLWNESGKLLFTL-- 1186

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            +    +    FS +GK    S   D+ + ++  +        L++   ++  A +SPD  
Sbjct: 1187 SHDGPVYHVAFSPDGKVIA-SASFDKTVKLW--NESGKLLSTLSHDNLVSHVA-FSPDGK 1242

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             I   S   G + + +   +G  +   +   +A      +SP G +IA   F      + 
Sbjct: 1243 VIASAS---GDKTVKLWNESG--KLLFTLSHDADVIHVAFSPDGKVIASASFDNT---VK 1294

Query: 375  VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            +  + G     L  D+++    +SP G+ +  +     D   KL+  + +G+  + ++  
Sbjct: 1295 LWNESGKLLFTLSHDADVNHVAFSPDGKVIASASY---DKTVKLW--NESGKLLSPLSHN 1349

Query: 435  AYASDPQWVG 444
                   +  
Sbjct: 1350 GPVYHVAFSP 1359



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 88/240 (36%), Gaps = 25/240 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ + +  G  +  L+   D I     FSP+ + +A A++D      V L +  
Sbjct: 1406 SASGDKTVKLWNESGQLLFTLSHDADVIHV--AFSPDGKVIASASWDK----TVKLWNES 1459

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                     +    +    FS +GK    SV  D  + ++  +        L++    ++
Sbjct: 1460 GKLLFTL--SHDDRVSHVAFSPDGKVIA-SVSDDSTVKLW--NESGKLLSTLSHDA--DV 1512

Query: 306  SA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  ++SPD   I   S  +   +L+    NG  +   +   +       +SP G +IA  
Sbjct: 1513 SHVAFSPDGKVIASAS-WDSTVKLW----NGEGKLLFTLSHDNLVSHVAFSPDGKVIASA 1567

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                    + +  + G     L  D  +    +SP G+ +        D   +LY  DL+
Sbjct: 1568 S---GDKTVKLWNESGKLLSTLSHDGEVNHVAFSPDGKVIA---SASADGTVRLYDYDLD 1621



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 95/265 (35%), Gaps = 19/265 (7%)

Query: 145  FSSPASWRKIA-HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
              +   W  +A   I   I +       D+ + + F  +  V         V   D +  
Sbjct: 962  LGATDDWVLVALQKIVSGIRERNQLVHDDYVTHVAFSPDGKVIASASGDNTVKLWDNSGK 1021

Query: 204  RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
               T S D  +    FSP+ + +A A+ D+     V L  TR  +    + +   +    
Sbjct: 1022 LLSTLSHDDYVTHVAFSPDGKVIASASGDN----TVKLW-TREGKVLSTLSHDDEVN-HV 1075

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             FS +GK    S   D+ + ++  +        L +  +     ++SPD   I   S  +
Sbjct: 1076 AFSPDGKVIA-SASYDKTVKLW--NESGKLLSTL-SHDYRVTHVAFSPDGKVIASAS-WD 1130

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               +L+    NGS +   +   +   +   +SP G +IA   F      + +  + G   
Sbjct: 1131 STVKLW----NGSGKLLSTLSHDDYVYHVAFSPDGKVIASASFDKT---VKLWNESGKLL 1183

Query: 384  RLLVEDSNLQAPTWSPSGRSLIFSR 408
              L  D  +    +SP G+ +  + 
Sbjct: 1184 FTLSHDGPVYHVAFSPDGKVIASAS 1208



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 81/213 (38%), Gaps = 21/213 (9%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            T S D ++    FSP+ + +A A+ D      V L +           +  + ++   FS
Sbjct: 1225 TLSHDNLVSHVAFSPDGKVIASASGDK----TVKLWNESGKLLFTL--SHDADVIHVAFS 1278

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             +GK    S   D  + ++  +        L++   +N  A +SPD   I   S     +
Sbjct: 1279 PDGKVIA-SASFDNTVKLW--NESGKLLFTLSHDADVNHVA-FSPDGKVIASASY---DK 1331

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             + +   +G     +S +     +   +SP G +IA          + +  + G     L
Sbjct: 1332 TVKLWNESGKLLSPLSHNGP--VYHVAFSPDGKVIASAS---GDKTVKLWNESGKLLSPL 1386

Query: 387  VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
              D+++    +SP G+ +       GD   KL+
Sbjct: 1387 SHDADVNHVAFSPDGKVIA---SASGDKTVKLW 1416



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 44/120 (36%), Gaps = 11/120 (9%)

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                    ++SPD   I   S   G   + +  ++G     +S D   ++    +SP G 
Sbjct: 988  HDDYVTHVAFSPDGKVIASAS---GDNTVKLWDNSGKLLSTLSHDDYVTHV--AFSPDGK 1042

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +IA          + +  ++G     L  D  +    +SP G+ +  +     D   KL+
Sbjct: 1043 VIASASGDNT---VKLWTREGKVLSTLSHDDEVNHVAFSPDGKVIASASY---DKTVKLW 1096



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 41/117 (35%), Gaps = 7/117 (5%)

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            S + F  +  V         V   +G      T S D ++    FSP+ + +A A+ D  
Sbjct: 1513 SHVAFSPDGKVIASASWDSTVKLWNGEGKLLFTLSHDNLVSHVAFSPDGKVIASASGDK- 1571

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                V L +           +    +    FS +GK    S   D  + +Y  DL S
Sbjct: 1572 ---TVKLWNESGKLLSTL--SHDGEVNHVAFSPDGKVIA-SASADGTVRLYDYDLDS 1622


>gi|313127123|ref|YP_004037393.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Halogeometricum
           borinquense DSM 11551]
 gi|312293488|gb|ADQ67948.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Halogeometricum
           borinquense DSM 11551]
          Length = 601

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 59/333 (17%), Positives = 111/333 (33%), Gaps = 21/333 (6%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           G D  R+ F L D     Q+        PA+W +   T  D+  +         N  ++F
Sbjct: 21  GPDGERLSF-LMDTTGVPQV---WTLDGPAAWPEQ-RTFYDE--RVTFASWSPENPELVF 73

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILR 238
             +    G  +  L   D     I  LT   D       +S +  + A+ +   DE +  
Sbjct: 74  GMDEG--GNERQQLLRYDPISGGISNLTEMPDAKHRWGGWSNDGDRFAFTSNRRDEAVFD 131

Query: 239 VYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATER 296
           VY+        A + +      +    +S +    ++S    +   D+  +D+++     
Sbjct: 132 VYVQGRDETGDAAEMVHEGDGWLTVGGWSPDDSMLVVSEAYSNFDQDVSVLDVETGELTH 191

Query: 297 LTNTLFINI--SASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPV 353
           LT         SA + PD   +   SDR+     L+ +     +   +++D E       
Sbjct: 192 LTPHEGTVRFQSAEWGPDGENVYLVSDRDSDTLDLWRVNVESGEFSLVAEDDEWEIDGVA 251

Query: 354 WSPQGDLIAFTKFSGEKFAIGV---MKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSR 408
                  I ++        + V      D   E  + +         ++SP G     + 
Sbjct: 252 VDHDSRRIVYSTNVDGYTELTVGELTAPDRIDEYAVPDLPRGVAGGVSFSPDGDRFAVTV 311

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            +  DT + +Y +D      T     A A  P+
Sbjct: 312 SRSSDT-ANVYVVDAKTGEVTQWTHAATAGIPR 343



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 76/209 (36%), Gaps = 12/209 (5%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +R  N RS   A  F  +G+R    +       ++++D  +   E+ T       
Sbjct: 2   TTHDIERYLNIRSAYGA-SFGPDGERLSFLMDTTGVPQVWTLDGPAAWPEQRTFYDERVT 60

Query: 306 SASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            AS+SP++ ++VF  D  G   +QL            +++  +A +    WS  GD  AF
Sbjct: 61  FASWSPENPELVFGMDEGGNERQQLLRYDPISGGISNLTEMPDAKHRWGGWSNDGDRFAF 120

Query: 364 TKFSGEK--FAIGVMKKD-GSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKL 418
           T    ++  F + V  +D       +V + +       WSP    L+ S     +    +
Sbjct: 121 TSNRRDEAVFDVYVQGRDETGDAAEMVHEGDGWLTVGGWSPDDSMLVVSEAYS-NFDQDV 179

Query: 419 YSIDL-NGRNETLINTPAYAS--DPQWVG 444
             +D+  G    L            +W  
Sbjct: 180 SVLDVETGELTHLTPHEGTVRFQSAEWGP 208


>gi|257062205|ref|YP_003140093.1| hypothetical protein Cyan8802_4475 [Cyanothece sp. PCC 8802]
 gi|256592371|gb|ACV03258.1| WD-40 repeat protein [Cyanothece sp. PCC 8802]
          Length = 1161

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 102/261 (39%), Gaps = 24/261 (9%)

Query: 157 TISDDIYQS--ITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            I D I++   +TG +   NS     +   + +     ++ + DR G   + +       
Sbjct: 545 QILDRIHEKNKLTGHEDAVNSVTFSPNGQLIATASSDGTIRLWDRQG-RQKTVITGHKGN 603

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++   FSP+ Q +A A+ D  +  +V+ +     +    +    S + +  FS + K  L
Sbjct: 604 IYRVTFSPDGQLIASASQD--NTAKVWNLQ---GQELMTLKGHNSSVYSVSFSPDSKHLL 658

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +  +D+   I+  DLQ +    L           +SPD  +I   + R+G  +++    
Sbjct: 659 -TTSRDDTARIW--DLQGHQLAILKGHEKSIDHGVFSPDGQRIA-TASRDGTVRIW---D 711

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           N  +  +I +D   S++   +SP G  +A +        I     D   + +L    + +
Sbjct: 712 NQGNLLKILKDSVDSFYSVSFSPDGQRLA-SSAKDGTVRIW----DNQGKSILTLKGHQE 766

Query: 394 ---APTWSPSGRSLIFSRKKD 411
                T+S  G  +  +    
Sbjct: 767 LVKNVTYSHDGNWIATASSDG 787



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 83/258 (32%), Gaps = 54/258 (20%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           Y     + V            ++      + +  FS NG+    +   D  + ++  D Q
Sbjct: 534 YPATRPIIVLEQILDRIHEKNKLTGHEDAVNSVTFSPNGQLIA-TASSDGTIRLW--DRQ 590

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESD-----------------REGKEQLYVMQS 333
                 +T         ++SPD   I   S                  +     +Y +  
Sbjct: 591 GRQKTVITGHKGNIYRVTFSPDGQLIASASQDNTAKVWNLQGQELMTLKGHNSSVYSVSF 650

Query: 334 NGSDQKRISQDKEASYF--------------------DPVWSPQGDLIAFTKFSGEKFAI 373
           +   +  ++  ++ +                        V+SP G  IA     G    +
Sbjct: 651 SPDSKHLLTTSRDDTARIWDLQGHQLAILKGHEKSIDHGVFSPDGQRIATASRDGT---V 707

Query: 374 GVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLY------SIDLNGR 426
            +    G+  ++L +  +   + ++SP G+ L  S  KDG    +++       + L G 
Sbjct: 708 RIWDNQGNLLKILKDSVDSFYSVSFSPDGQRLA-SSAKDGTV--RIWDNQGKSILTLKG- 763

Query: 427 NETLINTPAYASDPQWVG 444
           ++ L+    Y+ D  W+ 
Sbjct: 764 HQELVKNVTYSHDGNWIA 781



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 85/232 (36%), Gaps = 26/232 (11%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +     +  +    FSP+ QK+A      ++  RV L D + +   +   N    + +  
Sbjct: 882  WEFEGHNTGINSLNFSPDGQKIA----TADNNGRVKLWDRKGNILAELFDNSVR-VYSVT 936

Query: 265  FSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FSS+     I+  +   + +++++ +      + T         S+SPD   +V  S   
Sbjct: 937  FSSDSNLLAIAT-RSGEVWLWNIEKMPPQLIHQFTAHQETIYQLSFSPDGQTLVTAS--- 992

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            G +   +    G + ++      A      +SP G  +             +    G+  
Sbjct: 993  GDKTAKLWDLQG-NLQQEFLGHTAQVNGLAFSPNGQYLLTASEDSTA---KLWDLKGN-- 1046

Query: 384  RLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             +L    +   P     +SP G+ L  +  +DG    +L+  DL G   T +
Sbjct: 1047 -VLATLESDLFPVSRVNFSPDGQKLA-TASRDGTV--RLW--DLEGHLHTQM 1092



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 68/164 (41%), Gaps = 12/164 (7%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +   +  + +++  FSP+ Q +  A+ D        L D + +   + +G+   +     
Sbjct: 967  HQFTAHQETIYQLSFSPDGQTLVTASGDK----TAKLWDLQGNLQQEFLGHTAQVNGL-A 1021

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS NG+  L +  +D    ++  DL+ N    L + LF     ++SPD  ++   + R+G
Sbjct: 1022 FSPNGQYLL-TASEDSTAKLW--DLKGNVLATLESDLFPVSRVNFSPDGQKLA-TASRDG 1077

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
              +L+     G    ++   +EA   +  ++     +      G
Sbjct: 1078 TVRLW--DLEGHLHTQMKGHQEA-IGELQFTQDSQQLITIDRDG 1118



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 92/273 (33%), Gaps = 51/273 (18%)

Query: 75   RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGA-------QVLVTGRVIKEGKDRLRV- 126
             + + N ++     QKI   D+  R + W+  G          +    V       L   
Sbjct: 888  NTGI-NSLNFSPDGQKIATADNNGRVKLWDRKGNILAELFDNSVRVYSVTFSSDSNLLAI 946

Query: 127  -----EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD---DIYQSITGEKGDFNSRIL 178
                 E  LW++                   ++ H  +     IYQ      G       
Sbjct: 947  ATRSGEVWLWNI--------------EKMPPQLIHQFTAHQETIYQLSFSPDG------- 985

Query: 179  FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
               +++V+     +  + D  G N++         +    FSPN Q +  A+ D      
Sbjct: 986  ---QTLVTASGDKTAKLWDLQG-NLQQEFLGHTAQVNGLAFSPNGQYLLTASEDS----T 1037

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
              L D + +       +   +     FS +G++   +  +D  + ++  DL+ +   ++ 
Sbjct: 1038 AKLWDLKGNVLATLESDLFPVSR-VNFSPDGQKLA-TASRDGTVRLW--DLEGHLHTQMK 1093

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                      ++ DS Q++   DR+G  +++ +
Sbjct: 1094 GHQEAIGELQFTQDSQQLI-TIDRDGAVKIWPV 1125


>gi|218249119|ref|YP_002374490.1| WD-40 repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|218169597|gb|ACK68334.1| WD-40 repeat protein [Cyanothece sp. PCC 8801]
          Length = 1161

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 49/261 (18%), Positives = 102/261 (39%), Gaps = 24/261 (9%)

Query: 157 TISDDIYQS--ITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            I D I++   +TG +   NS     +   + +     ++ + DR G   + +       
Sbjct: 545 QILDRIHEKNKLTGHEDAVNSVTFSPNGQLIATASSDGTIRLWDRQG-RQKTVITGHKGN 603

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++   FSP+ Q +A A+ D  +  +V+ +     +    +    S + +  FS + K  L
Sbjct: 604 IYRVTFSPDGQLIASASQD--NTAKVWNLQ---GQELMTLKGHNSSVYSVSFSPDSKHLL 658

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +  +D+   I+  DLQ +    L           +SPD  +I   + R+G  +++    
Sbjct: 659 -TTSRDDTARIW--DLQGHQLAILKGHEKSIDHGVFSPDGQRIA-TASRDGTVRIW---D 711

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           N  +  +I +D   S++   +SP G  +A +        I     D   + +L    + +
Sbjct: 712 NQGNLLKILKDSVDSFYSVSFSPDGQRLA-SSAKDGTVRIW----DNQGKSILTLKGHQE 766

Query: 394 ---APTWSPSGRSLIFSRKKD 411
                T+S  G  +  +    
Sbjct: 767 LVKNVTYSHDGNWIATASSDG 787



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 83/258 (32%), Gaps = 54/258 (20%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           Y     + V            ++      + +  FS NG+    +   D  + ++  D Q
Sbjct: 534 YPATRPIIVLEQILDRIHEKNKLTGHEDAVNSVTFSPNGQLIA-TASSDGTIRLW--DRQ 590

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESD-----------------REGKEQLYVMQS 333
                 +T         ++SPD   I   S                  +     +Y +  
Sbjct: 591 GRQKTVITGHKGNIYRVTFSPDGQLIASASQDNTAKVWNLQGQELMTLKGHNSSVYSVSF 650

Query: 334 NGSDQKRISQDKEASYF--------------------DPVWSPQGDLIAFTKFSGEKFAI 373
           +   +  ++  ++ +                        V+SP G  IA     G    +
Sbjct: 651 SPDSKHLLTTSRDDTARIWDLQGHQLAILKGHEKSIDHGVFSPDGQRIATASRDGT---V 707

Query: 374 GVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLY------SIDLNGR 426
            +    G+  ++L +  +   + ++SP G+ L  S  KDG    +++       + L G 
Sbjct: 708 RIWDNQGNLLKILKDSVDSFYSVSFSPDGQRLA-SSAKDGTV--RIWDNQGKSILTLKG- 763

Query: 427 NETLINTPAYASDPQWVG 444
           ++ L+    Y+ D  W+ 
Sbjct: 764 HQELVKNVTYSHDGNWIA 781



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 85/232 (36%), Gaps = 26/232 (11%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +     +  +    FSP+ QK+A      ++  RV L D R  +    + +    + +  
Sbjct: 882  WEFEGHNSGINSLNFSPDGQKIA----TADNNGRVKLWD-RKGKILAELFDNSVRVYSVT 936

Query: 265  FSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FSS+     I+  +   + +++++ +      + T         S+SPD   +V  S   
Sbjct: 937  FSSDSNLLAIAT-RSGEVWLWNIEKMPPQLIHQFTAHQETIYQLSFSPDGQTLVTAS--- 992

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            G +   +    G + ++      A      +SP G  +             +    G+  
Sbjct: 993  GDKTAKLWDLQG-NLQQEFLGHTAQVNGLAFSPNGQYLLTASEDSTA---KLWDLKGN-- 1046

Query: 384  RLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             +L    +   P     +SP G+ L  +  +DG    +L+  DL G   T +
Sbjct: 1047 -VLATLESDLFPVSRVNFSPDGQKLA-TASRDGTV--RLW--DLEGHLHTQM 1092



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 92/238 (38%), Gaps = 21/238 (8%)

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             V +  G  +  +       +++   S N Q++A A+ D    ++++ +++   +    +
Sbjct: 790  RVWNTQGQEV-MVFRGHQDPVYDVAISSNSQELATASSD--GTVKLWHINSPQQQGFNTL 846

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
              +   + A     + +   I+ +      +Y  +LQ               S ++SPD 
Sbjct: 847  DTY---VTAVSVFPDDQLLAIASE---NGQVYLWNLQGKFLWEFEGHNSGINSLNFSPDG 900

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--F 371
             +I   +D  G+ +L+     G     +  D     +   +S   +L+A    SGE   +
Sbjct: 901  QKIA-TADNNGRVKLW--DRKGKILAEL-FDNSVRVYSVTFSSDSNLLAIATRSGEVWLW 956

Query: 372  AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             I  M       +       +   ++SP G++L+ +    GD  +KL+  DL G  + 
Sbjct: 957  NIEKMPPQ-LIHQFTAHQETIYQLSFSPDGQTLVTAS---GDKTAKLW--DLQGNLQQ 1008



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 68/164 (41%), Gaps = 12/164 (7%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +   +  + +++  FSP+ Q +  A+ D        L D + +   + +G+   +     
Sbjct: 967  HQFTAHQETIYQLSFSPDGQTLVTASGDK----TAKLWDLQGNLQQEFLGHTAQVNGL-A 1021

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS NG+  L +  +D    ++  DL+ N    L + LF     ++SPD  ++   + R+G
Sbjct: 1022 FSPNGQYLL-TASEDSTAKLW--DLKGNVLATLESDLFPVSRVNFSPDGQKLA-TASRDG 1077

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
              +L+     G    ++   +EA   +  ++     +      G
Sbjct: 1078 TVRLW--DLEGHLHTQMKGHQEA-IGELQFTQDSQQLITIDRDG 1118



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 95/273 (34%), Gaps = 51/273 (18%)

Query: 75   RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLG---AQV----LVTGRVIKEGKDRLRV- 126
             S + N ++     QKI   D+  R + W+  G   A++    +    V       L   
Sbjct: 888  NSGI-NSLNFSPDGQKIATADNNGRVKLWDRKGKILAELFDNSVRVYSVTFSSDSNLLAI 946

Query: 127  -----EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD---DIYQSITGEKGDFNSRIL 178
                 E  LW++                   ++ H  +     IYQ      G       
Sbjct: 947  ATRSGEVWLWNI--------------EKMPPQLIHQFTAHQETIYQLSFSPDG------- 985

Query: 179  FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
               +++V+     +  + D  G N++         +    FSPN Q +  A+ D      
Sbjct: 986  ---QTLVTASGDKTAKLWDLQG-NLQQEFLGHTAQVNGLAFSPNGQYLLTASEDS----T 1037

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
              L D + +       +   +     FS +G++   +  +D  + ++  DL+ +   ++ 
Sbjct: 1038 AKLWDLKGNVLATLESDLFPVSR-VNFSPDGQKLA-TASRDGTVRLW--DLEGHLHTQMK 1093

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                      ++ DS Q++   DR+G  +++ +
Sbjct: 1094 GHQEAIGELQFTQDSQQLI-TIDRDGAVKIWPV 1125


>gi|298248499|ref|ZP_06972304.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297551158|gb|EFH85024.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 586

 Score = 93.9 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 73/222 (32%), Gaps = 12/222 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ V +    +  +        +    +SP+ + +A A+    + ++V+  +  
Sbjct: 319 SGSRDKTVQVWNASDGSHVFTYQGHTNYVASVAWSPDGKWIASASGYGYNTVQVWNANDG 378

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R     + + +  +S +GKR   S   D  + +++ +   +             
Sbjct: 379 SHVFTYR--GHINYVASVAWSPDGKRIA-SGSADNTVQVWNTN-DGSHVFTYKGHSDWVY 434

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + ++SPD  +I   S     + + V  ++        +          WSP G   A   
Sbjct: 435 TVAWSPDGKRIASGS---ADKTVQVWNASDGSHVFTYKGHSNKVNAVAWSPDGKRTASCS 491

Query: 366 FSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
                  + V                S + A  WSP G+ + 
Sbjct: 492 TDKT---VQVWNASNGSHVFTYKGHSSWVNAVAWSPDGKWIA 530



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 76/254 (29%), Gaps = 25/254 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
               +        +    +SP+ + +A  + D      V + +              + +
Sbjct: 292 FRQLFTYRGHSNYVDAVAWSPDGKWIASGSRDK----TVQVWNASDGSHVFTYQGHTNYV 347

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--YSPDSSQIVF 318
            +  +S +GK    S        +   +    +    T    IN  AS  +SPD  +I  
Sbjct: 348 ASVAWSPDGKWIA-SASGYGYNTVQVWNANDGS-HVFTYRGHINYVASVAWSPDGKRIAS 405

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S       + V  +N        +      +   WSP G  IA          + V   
Sbjct: 406 GS---ADNTVQVWNTNDGSHVFTYKGHSDWVYTVAWSPDGKRIASGSADKT---VQVWNA 459

Query: 379 DGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKK------DGDTGSKLYSIDLNGRNETL 430
                    +  +    A  WSP G+              +   GS +++   +      
Sbjct: 460 SDGSHVFTYKGHSNKVNAVAWSPDGKRTASCSTDKTVQVWNASNGSHVFTYKGHSSW--- 516

Query: 431 INTPAYASDPQWVG 444
           +N  A++ D +W+ 
Sbjct: 517 VNAVAWSPDGKWIA 530



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 71/186 (38%), Gaps = 9/186 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG   N++ V + +  +  +        ++   +SP+ +++A  + D      V +
Sbjct: 401 KRIASGSADNTVQVWNTNDGSHVFTYKGHSDWVYTVAWSPDGKRIASGSADK----TVQV 456

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +              + + A  +S +GKR   S   D+ + +++    S+      ++ 
Sbjct: 457 WNASDGSHVFTYKGHSNKVNAVAWSPDGKRTA-SCSTDKTVQVWNASNGSHVFTYKGHSS 515

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           ++N  A +SPD   I   S R+   Q++   ++        Q          WSP    I
Sbjct: 516 WVNAVA-WSPDGKWIASGS-RDKTVQVW--NASDGSLAFTYQGHSNWVAAVAWSPDKKRI 571

Query: 362 AFTKFS 367
           A   F 
Sbjct: 572 ASGSFD 577



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 37/114 (32%), Gaps = 8/114 (7%)

Query: 335 GSDQKRI-SQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           GS  +++ +    ++Y D   WSP G  IA          + V            +    
Sbjct: 289 GSSFRQLFTYRGHSNYVDAVAWSPDGKWIASGSRDKT---VQVWNASDGSHVFTYQGHTN 345

Query: 393 QAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              +  WSP G+ +  +    G    ++++ +      T      Y +   W  
Sbjct: 346 YVASVAWSPDGKWIASASGY-GYNTVQVWNANDGSHVFTYRGHINYVASVAWSP 398


>gi|298250587|ref|ZP_06974391.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297548591|gb|EFH82458.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 440

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 73/223 (32%), Gaps = 15/223 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   +++ V D      R         +    +SP+   +A  ++D      V +    
Sbjct: 213 SGSWDHTVQVWDAFTGQNRLTYTGHTAEVTTLAWSPDGHDIASGSWDH----TVRVWTAY 268

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +      N + ++    +S +GK+   S   D+ + I+                    
Sbjct: 269 TGQTLLTYDNRKELVSTLAWSPDGKKIA-SGGHDDHVQIWDAHTGYTYLNYAYTISDPVD 327

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFT 364
           S ++SPD  +I       G++    +    + Q+ ++            WSP G  IA  
Sbjct: 328 SLAWSPDGKKIA----TGGRDTTVQVWDATTGQRLLTYHGHSGEVMSVAWSPDGSKIASG 383

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
                   + V      Q  L     N    A  WSP+G+ + 
Sbjct: 384 SRDTT---VQVWNASTGQTLLSYRGHNNVVDAVAWSPNGKKIA 423



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 113/336 (33%), Gaps = 50/336 (14%)

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-- 181
           L V   L+ V     ++G  + ++     ++   ++   Y+  T    DF S + +    
Sbjct: 117 LAVACILFGV----MLLGNFYLAATNLASQVG--VAVTTYRQHT----DFVSAVAWSPDG 166

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V S     ++ V       +  +     +++    +SP+ + +A  ++D      V +
Sbjct: 167 QYVASASWDGTVHVWKAKSGELVSVYHGHAKVVDTVAWSPDGRYIASGSWDH----TVQV 222

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--N 299
            D    +         + +    +S +G     S   D  + +++          LT  N
Sbjct: 223 WDAFTGQNRLTYTGHTAEVTTLAWSPDGHDIA-SGSWDHTVRVWT---AYTGQTLLTYDN 278

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-----VW 354
              +  + ++SPD  +I         + + +  ++       +    A           W
Sbjct: 279 RKELVSTLAWSPDGKKIA---SGGHDDHVQIWDAHTG----YTYLNYAYTISDPVDSLAW 331

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKD 411
           SP G  IA     G    + V      Q RLL        + +  WSP G  +    +  
Sbjct: 332 SPDGKKIA---TGGRDTTVQVWDATTGQ-RLLTYHGHSGEVMSVAWSPDGSKIASGSR-- 385

Query: 412 GDTGSKLYSIDLNGRNETLINTPAY---ASDPQWVG 444
            DT  ++++       +TL++   +        W  
Sbjct: 386 -DTTVQVWNAS---TGQTLLSYRGHNNVVDAVAWSP 417



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 39/102 (38%), Gaps = 5/102 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ V D                +    +SP+  K+A  + D      V + +  
Sbjct: 340 TGGRDTTVQVWDATTGQRLLTYHGHSGEVMSVAWSPDGSKIASGSRDT----TVQVWNAS 395

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             +         +++ A  +S NGK+   S  +D ++ +++V
Sbjct: 396 TGQTLLSYRGHNNVVDAVAWSPNGKKIA-SGGEDHSVQVWNV 436


>gi|310819318|ref|YP_003951676.1| wd-40 repeat containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|309392390|gb|ADO69849.1| WD-40 repeat containing protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1234

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 102/273 (37%), Gaps = 22/273 (8%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +  E   +++        +V+     +  + D                +    FSP+  +
Sbjct: 650 LRHEGDVWSAAFSPDGARIVTASEDQTARIWDGRSGQPLATLQGHLDDVRRATFSPDGAR 709

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +  A+ D        + D+R  +    +   +  + +  FS +G R + +  +D+   ++
Sbjct: 710 IVTASDDQ----TARIWDSRSGQLLSTLAGHQGPVWSAAFSPDGARIV-TASEDQTARLW 764

Query: 286 SVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                  + +RLT         +SA++SPD ++IV  SD +   +++    +        
Sbjct: 765 ----DGRSGQRLTLLQGHRDSVLSAAFSPDGTRIVTASD-DQTARIWGWDGHSVQLLATL 819

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           Q          +SP G  I      G    I    + G     L  ++ + +  +SP G 
Sbjct: 820 QGHRKMVRSAAFSPDGLRIVTASKDGTA-RIW-DGRSGPFLATLEHEAPVWSAAFSPDGS 877

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            ++ + K   D  ++++    +GR+  L+  PA
Sbjct: 878 LIVTASK---DHTARIW----DGRSGQLLALPA 903



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 122/325 (37%), Gaps = 57/325 (17%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           R+WD +  + +   +            H   DD+ ++     G            +V+  
Sbjct: 678 RIWDGRSGQPLATLQ-----------GHL--DDVRRATFSPDGA----------RIVTAS 714

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              +  + D     +          ++   FSP+  ++  A+ D        L D R  +
Sbjct: 715 DDQTARIWDSRSGQLLSTLAGHQGPVWSAAFSPDGARIVTASEDQ----TARLWDGRSGQ 770

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINI 305
               +   R  +L+  FS +G R + +   D+   I+      ++ + L        +  
Sbjct: 771 RLTLLQGHRDSVLSAAFSPDGTRIV-TASDDQTARIWG--WDGHSVQLLATLQGHRKMVR 827

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           SA++SPD  +IV  + ++G  +++    +G S     + + EA  +   +SP G LI   
Sbjct: 828 SAAFSPDGLRIV-TASKDGTARIW----DGRSGPFLATLEHEAPVWSAAFSPDGSLIVTA 882

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN-----LQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                   I     DG   +LL   +      +Q+ T+SP G  ++ + +   D  ++L+
Sbjct: 883 SKDHTA-RIW----DGRSGQLLALPALQHERPIQSVTFSPEGSRIVTASE---DHTARLW 934

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
               +GR+  L+ T  +     W  
Sbjct: 935 ----DGRSGQLLATLKHEGS-VWSA 954



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 95/277 (34%), Gaps = 31/277 (11%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQ 223
           +  E+   ++        +V+     +  +   DG + + L      +  +    FSP+ 
Sbjct: 564 LKHERSVLSAAFSPDGTRIVTASDDQTARIWGWDGHSAQLLATLQGHENSVQSAAFSPDG 623

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             +  A+ D          D    +           + +  FS +G R + +  +D+   
Sbjct: 624 SLIITASSDG----SARRWDGHSGQFLAPPLRHEGDVWSAAFSPDGARIV-TASEDQTAR 678

Query: 284 IYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           I+       + + L      L     A++SPD ++IV  SD    +   +  S       
Sbjct: 679 IW----DGRSGQPLATLQGHLDDVRRATFSPDGARIVTASD---DQTARIWDSRSGQLLS 731

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPT 396
                +   +   +SP G  I  T    +   +     DG   + L        ++ +  
Sbjct: 732 TLAGHQGPVWSAAFSPDGARIV-TASEDQTARLW----DGRSGQRLTLLQGHRDSVLSAA 786

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +SP G  ++ +     D  ++++    +G +  L+ T
Sbjct: 787 FSPDGTRIVTASD---DQTARIW--GWDGHSVQLLAT 818



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/329 (13%), Positives = 103/329 (31%), Gaps = 45/329 (13%)

Query: 129  RLWDVKDRKQIIG---------KKFFSSPASWR----------KIAHTISDDIYQSITGE 169
            R+WD +  + +           +    SP   R          ++    S  +  ++  E
Sbjct: 889  RIWDGRSGQLLALPALQHERPIQSVTFSPEGSRIVTASEDHTARLWDGRSGQLLATLKHE 948

Query: 170  KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
               +++        +V+        + D                +    FSP+  ++  A
Sbjct: 949  GSVWSAAFSQDGARIVTASSDGMARIWDGRSGQPLATLQGHQGTVRSAAFSPDGARLITA 1008

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            + D        + +    +           + +  FS +G R + +   D+   ++   L
Sbjct: 1009 SSDG----TARIWNGHSGQLLAPPLRHEGDVWSAAFSPDGTRIV-TASDDQTARLWD-GL 1062

Query: 290  QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                         +  SA++SPD ++IV  +  +G  +++             Q+     
Sbjct: 1063 SGQPLSPPLKHGDVVWSAAFSPDGTRIV-TASSDGTARIW--DGRSGQALSTLQEHTGPV 1119

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLI 405
            +   +SP G  I  T        I     D    +LL +      +++   +SP G  ++
Sbjct: 1120 WSAAFSPDGTRIVTTGQDDPTACIW----DSHSGQLLAKLQGPPDDVRNAVFSPDGSRVV 1175

Query: 406  FSRKKDG---------DTGSKLYSIDLNG 425
             +   +             ++L+   L G
Sbjct: 1176 TTSSPEDGSRVVTPGHPGTARLWIASLEG 1204



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 91/245 (37%), Gaps = 30/245 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  +    FSP+   +  A+ D        L D+   +    + + RS +L+  FS
Sbjct: 522 LKGHENGVQSAAFSPDGSLIVTASDDQ----TALLWDSHSGQPLATLKHERS-VLSAAFS 576

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDRE 323
            +G R + +   D+   I+      ++ + L           SA++SPD S I+  +  +
Sbjct: 577 PDGTRIV-TASDDQTARIWG--WDGHSAQLLATLQGHENSVQSAAFSPDGSLII-TASSD 632

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  +      +           E   +   +SP G  I  T    +   I     DG   
Sbjct: 633 GSAR--RWDGHSGQFLAPPLRHEGDVWSAAFSPDGARIV-TASEDQTARIW----DGRSG 685

Query: 384 RLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           + L        +++  T+SP G  ++ +     D  ++++    + R+  L++T A    
Sbjct: 686 QPLATLQGHLDDVRRATFSPDGARIVTASD---DQTARIW----DSRSGQLLSTLAGHQG 738

Query: 440 PQWVG 444
           P W  
Sbjct: 739 PVWSA 743



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 78/205 (38%), Gaps = 20/205 (9%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             +     ++     +    +    + + +  FS +G   +++   D+   ++  D  S 
Sbjct: 502 PPEAFSGIMLGVSDLKYSSPLKGHENGVQSAAFSPDG-SLIVTASDDQTALLW--DSHSG 558

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                       +SA++SPD ++IV  SD +   +++    + +      Q  E S    
Sbjct: 559 QPLATLKHERSVLSAAFSPDGTRIVTASD-DQTARIWGWDGHSAQLLATLQGHENSVQSA 617

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSR 408
            +SP G LI      G          DG   + L      + ++ +  +SP G  ++ + 
Sbjct: 618 AFSPDGSLIITASSDGSARRW-----DGHSGQFLAPPLRHEGDVWSAAFSPDGARIVTAS 672

Query: 409 KKDGDTGSKLYSIDLNGRNETLINT 433
           +   D  ++++    +GR+   + T
Sbjct: 673 E---DQTARIW----DGRSGQPLAT 690


>gi|219851530|ref|YP_002465962.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Methanosphaerula palustris E1-9c]
 gi|219545789|gb|ACL16239.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Methanosphaerula palustris E1-9c]
          Length = 709

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 82/248 (33%), Gaps = 64/248 (25%)

Query: 260 ILAPRFSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I AP  S +G   +  ++           +++ V        +LT     + +  +SPDS
Sbjct: 47  IGAPSPSPDGTWIVFPLRSTDLADNKGLTNLWIVRPDGTGLHQLTFQPGDDANPCWSPDS 106

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF------- 366
           S + + S R G  Q++ +  +G D  +++ +      +   S  G  +AF+         
Sbjct: 107 STVYYLSTRSGSSQVWKVSPSGGDAVQVT-NFSLDCSNLKISSDGKDLAFSMGVFPNTSM 165

Query: 367 --------------------------------SGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                                            G +  + V+     +   L++  N  +
Sbjct: 166 EETTARLTAIEQQNASGKIYTTLPVRHWDTYEDGRRNHLFVLDLATGEPVDLMKAMNADS 225

Query: 395 PT----------WSPSGRSLIFSRKKDG-----DTGSKLYSIDLNGRNETLINTP---AY 436
           P+          ++P    ++FS    G      T   LY   + G  + +  TP   A+
Sbjct: 226 PSEPFGGPEEYTFTPDNTGIVFSAADTGSEAMWSTEHNLYRASVAGTGQPVNLTPANRAW 285

Query: 437 ASDPQWVG 444
            + P +  
Sbjct: 286 ITQPAFSP 293



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 55/332 (16%), Positives = 110/332 (33%), Gaps = 75/332 (22%)

Query: 175 SRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + I+F   S          +L ++  DG  +  LT  +      P +SP+   V Y +  
Sbjct: 57  TWIVFPLRSTDLADNKGLTNLWIVRPDGTGLHQLT-FQPGDDANPCWSPDSSTVYYLSTR 115

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV---------------- 276
                      +       ++ NF       + SS+GK    S+                
Sbjct: 116 SGS--SQVWKVSPSGGDAVQVTNFSLDCSNLKISSDGKDLAFSMGVFPNTSMEETTARLT 173

Query: 277 -----------------------QKDEAMDIYSVDLQSNATERLTNTLFINISAS----- 308
                                  +      ++ +DL +     L   +  + S S     
Sbjct: 174 AIEQQNASGKIYTTLPVRHWDTYEDGRRNHLFVLDLATGEPVDLMKAMNAD-SPSEPFGG 232

Query: 309 -----YSPDSSQIVFESDREGKEQLYVMQSN--------GSDQKRISQDKEASYFDPVWS 355
                ++PD++ IVF +   G E ++  + N              ++    A    P +S
Sbjct: 233 PEEYTFTPDNTGIVFSAADTGSEAMWSTEHNLYRASVAGTGQPVNLTPANRAWITQPAFS 292

Query: 356 PQGDLIAFTKFSG-----EKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFS 407
           P G  +A+   +      +++ I +       +R +    + ++P+   WS  G++L  +
Sbjct: 293 PDGTTLAYLAMTHPGYEADRYHIMLRSWPDGDDREVAASWD-RSPSSIIWSQDGKTLYVT 351

Query: 408 RKKDGDTGSKLYSID-LNGRNETLINTPAYAS 438
               G   S L++ID + G   TL+     +S
Sbjct: 352 AMDRG--NSALFAIDPVTGAVRTLVGNGTVSS 381



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 82/272 (30%), Gaps = 41/272 (15%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+  + +   SG I  +L V   D                      + ++      D   
Sbjct: 171 RLTAIEQQNASGKIYTTLPVRHWDTYE-------------------DGRRNHLFVLDLAT 211

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD------- 288
              V LM      +P              F+ +    + S     +  ++S +       
Sbjct: 212 GEPVDLMKAMNADSPSEPFGGPEEY---TFTPDNTGIVFSAADTGSEAMWSTEHNLYRAS 268

Query: 289 -LQSNATERLT-NTLFINISASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRI 341
              +     LT          ++SPD + + + +         +  + +      D + +
Sbjct: 269 VAGTGQPVNLTPANRAWITQPAFSPDGTTLAYLAMTHPGYEADRYHIMLRSWPDGDDREV 328

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS 400
           +   + S    +WS  G  +  T       A+  +       R LV +  + +  T    
Sbjct: 329 AASWDRSPSSIIWSQDGKTLYVTAMDRGNSALFAIDPVTGAVRTLVGNGTVSSVGTI--- 385

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           G  L++S      + + LY+ID +G     I 
Sbjct: 386 GNRLVYSLANQ-TSPADLYTIDPDGTEPVRIT 416



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 81/214 (37%), Gaps = 13/214 (6%)

Query: 174 NSRILFVSESVVSGIIKNS---LCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYA 229
           N+ I+F +    S  + ++   L      G      LTP+    + +P FSP+   +AY 
Sbjct: 242 NTGIVFSAADTGSEAMWSTEHNLYRASVAGTGQPVNLTPANRAWITQPAFSPDGTTLAYL 301

Query: 230 TYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                    D   + L         +   ++     +  +S +GK   ++        ++
Sbjct: 302 AMTHPGYEADRYHIMLRSWPDGDDREVAASWDRSPSSIIWSQDGKTLYVTAMDRGNSALF 361

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQD 344
           ++D  + A   L   +     +S     +++V+  +++     LY +  +G++  RI+Q 
Sbjct: 362 AIDPVTGAVRTL---VGNGTVSSVGTIGNRLVYSLANQTSPADLYTIDPDGTEPVRITQI 418

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                   V     +  +F+ ++ E     V+K 
Sbjct: 419 -NGDRLAQVRMGDYEQFSFSGWNNETVYGYVVKP 451



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 5/64 (7%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRN-ETLINTPAYASDP 440
           LV    + AP+ SP G  ++F  +     D    + L+ +  +G     L   P   ++P
Sbjct: 41  LVTLQRIGAPSPSPDGTWIVFPLRSTDLADNKGLTNLWIVRPDGTGLHQLTFQPGDDANP 100

Query: 441 QWVG 444
            W  
Sbjct: 101 CWSP 104


>gi|224023370|ref|ZP_03641736.1| hypothetical protein BACCOPRO_00063 [Bacteroides coprophilus DSM
           18228]
 gi|224016592|gb|EEF74604.1| hypothetical protein BACCOPRO_00063 [Bacteroides coprophilus DSM
           18228]
          Length = 710

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 94/297 (31%), Gaps = 71/297 (23%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+ +++AY        +++  L +Y+M+       + +    +    P +  NG + 
Sbjct: 60  AVSPDGKRIAYTVSYYSVKENKSHLVIYVMNADGSDN-RLLTTTAASEGEPAWIKNGSKI 118

Query: 273 LI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK------ 325
              +   +    ++ ++   +  ++L++         +SPD S+++F S  +        
Sbjct: 119 AFLAADANGNSQVWEMNPDGSGRKQLSDYAGGIDGFRFSPDESKLLFISQVKYGERTADK 178

Query: 326 ---------------------------EQLYVMQSNGSDQKRISQ-----------DKEA 347
                                         +V   +G+     +                
Sbjct: 179 YPDLDKASGMVIDDLMYKHWDEWVQTVPHPFVASFDGNKVGEATDILAGEPYESPMKPFG 238

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVED-------SNL 392
                 WS     IA+T                I +   +  Q R L ++          
Sbjct: 239 GIEQLAWSNDSKQIAYTCRKKTGLDYAISTDSDIYLYNLETKQTRNLCKEDAADKNMGYD 298

Query: 393 QAPTWSPSGRSLIF-SRKKDG--DTGSKLYSIDLNGRNETLINTP--AYASDPQWVG 444
             P +SP G+S+ + S ++DG     ++L  +DL    +T +     +   D  W  
Sbjct: 299 TNPKFSPDGKSIAWQSMERDGYESDRNRLCVMDLTSGKKTYVTESFQSGVDDYCWAP 355



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 90/282 (31%), Gaps = 67/282 (23%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD----- 283
           A   +  I+    +  +  R           I +   S +GKR   +V      +     
Sbjct: 25  AAQAEGPIIGKQEITVKEGRMTPETLWAMGRIGSSAVSPDGKRIAYTVSYYSVKENKSHL 84

Query: 284 -IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRI 341
            IY ++   +    LT T       ++  + S+I F  +D  G  Q++ M  +GS +K++
Sbjct: 85  VIYVMNADGSDNRLLTTTAASEGEPAWIKNGSKIAFLAADANGNSQVWEMNPDGSGRKQL 144

Query: 342 SQDKEASYFDPVWSPQGDLIAFTK------FSGEKF------------------------ 371
           S D         +SP    + F         + +K+                        
Sbjct: 145 S-DYAGGIDGFRFSPDESKLLFISQVKYGERTADKYPDLDKASGMVIDDLMYKHWDEWVQ 203

Query: 372 ---AIGVMKKDG---SQERLLVEDSNLQAP----------TWSPSGRSLIFS-RKKDG-- 412
                 V   DG    +   ++     ++P           WS   + + ++ RKK G  
Sbjct: 204 TVPHPFVASFDGNKVGEATDILAGEPYESPMKPFGGIEQLAWSNDSKQIAYTCRKKTGLD 263

Query: 413 ---DTGSKLYSIDLNGRNETLI-------NTPAYASDPQWVG 444
               T S +Y  +L  +    +           Y ++P++  
Sbjct: 264 YAISTDSDIYLYNLETKQTRNLCKEDAADKNMGYDTNPKFSP 305



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 118/345 (34%), Gaps = 78/345 (22%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---- 230
           S+I F++         + +  M+ DG+  + L+     I    RFSP++ K+ + +    
Sbjct: 116 SKIAFLA---ADANGNSQVWEMNPDGSGRKQLSDYAGGIDGF-RFSPDESKLLFISQVKY 171

Query: 231 ----------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMIL------------- 261
                              +D++  +  +         + +F    +             
Sbjct: 172 GERTADKYPDLDKASGMVIDDLMYKHWDEWVQTVPHPFVASFDGNKVGEATDILAGEPYE 231

Query: 262 AP----------RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERL------ 297
           +P           +S++ K+   + +K            DIY  +L++  T  L      
Sbjct: 232 SPMKPFGGIEQLAWSNDSKQIAYTCRKKTGLDYAISTDSDIYLYNLETKQTRNLCKEDAA 291

Query: 298 TNTLFINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYFDP 352
              +  + +  +SPD   I ++S +R+G    + +L VM      +  +++  ++   D 
Sbjct: 292 DKNMGYDTNPKFSPDGKSIAWQSMERDGYESDRNRLCVMDLTSGKKTYVTESFQSGVDDY 351

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            W+P    + F         I     +G  ++L     +  +      G+ L  +++   
Sbjct: 352 CWAPDSRTLYFVGVWHATSMIHSTNLEGDVKQLTDGMYDYASVAMLNDGQLL--TKRHSL 409

Query: 413 DTGSKLYSIDLNGRNETLINTPAYAS----------DPQWVGFMD 447
               +L+++ LN  N     T               +P+W   +D
Sbjct: 410 SEADELFTVSLNQENAVSRITKENDHIFSQLKLGKVEPRWTKTVD 454



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 59/325 (18%), Positives = 107/325 (32%), Gaps = 71/325 (21%)

Query: 176 RILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           RI +     SV        + VM+ DG++ R LT +      EP +  N  K+A+   D 
Sbjct: 67  RIAYTVSYYSVKENKSHLVIYVMNADGSDNRLLTTTAAS-EGEPAWIKNGSKIAFLAADA 125

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------KDEAMDI-- 284
               +V+ M+       K++ ++   I   RFS +  + L   Q        D+  D+  
Sbjct: 126 NGNSQVWEMNPD-GSGRKQLSDYAGGIDGFRFSPDESKLLFISQVKYGERTADKYPDLDK 184

Query: 285 ------------------------YSVDLQSNATERLTNTLFINI--SA----------S 308
                                   +      N     T+ L      S           +
Sbjct: 185 ASGMVIDDLMYKHWDEWVQTVPHPFVASFDGNKVGEATDILAGEPYESPMKPFGGIEQLA 244

Query: 309 YSPDSSQIVFE-SDREG-------KEQLYVMQSNGSDQKRI-----SQDKEASYFDPVWS 355
           +S DS QI +    + G          +Y+        + +     +        +P +S
Sbjct: 245 WSNDSKQIAYTCRKKTGLDYAISTDSDIYLYNLETKQTRNLCKEDAADKNMGYDTNPKFS 304

Query: 356 PQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSR 408
           P G  IA+     + +      + VM     ++  + E   S +    W+P  R+L F  
Sbjct: 305 PDGKSIAWQSMERDGYESDRNRLCVMDLTSGKKTYVTESFQSGVDDYCWAPDSRTLYFVG 364

Query: 409 KKDGDTGSKLYSIDLNGRNETLINT 433
                  S ++S +L G  + L + 
Sbjct: 365 V--WHATSMIHSTNLEGDVKQLTDG 387



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 82/229 (35%), Gaps = 21/229 (9%)

Query: 158 ISDDIYQSITGEK--GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
            +D      T  K   D  S      E       +N LCVMD       Y+T S    + 
Sbjct: 290 AADKNMGYDTNPKFSPDGKSIAWQSMERDGYESDRNRLCVMDLTSGKKTYVTESFQSGVD 349

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +  ++P+ + + +            +  T ++   K++ +      +    ++G+     
Sbjct: 350 DYCWAPDSRTLYFVGVWH---ATSMIHSTNLEGDVKQLTDGMYDYASVAMLNDGQLLTKR 406

Query: 276 VQKDEAMDIYSVDL-QSNATERLT---NTLFIN-----ISASYSP--DSS----QIVFES 320
               EA ++++V L Q NA  R+T   + +F       +   ++   D       +V+ +
Sbjct: 407 HSLSEADELFTVSLNQENAVSRITKENDHIFSQLKLGKVEPRWTKTVDGKDMLSWVVYPA 466

Query: 321 DREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           D +  ++   +    G  Q  +SQ     +   + +  G ++      G
Sbjct: 467 DFDPNKKYPTLLFCEGGPQSPVSQFWSYRWNLQIMAANGYIVIAPNRRG 515


>gi|158341340|ref|YP_001522505.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158311581|gb|ABW33191.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1231

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 89/243 (36%), Gaps = 19/243 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++VVS    N+L V +              + +     SP+ Q V  A+ D+     + +
Sbjct: 951  QTVVSASRDNTLKVWNLKTGKKLCTLIGHTEYVTGVSISPDGQTVVSASRDN----TLKV 1006

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             + +  +    +      +     S + +  ++S   D  + ++  DL +   +R LT  
Sbjct: 1007 WNLKTGKKLCTLIGHTGSVTGESISPDSQT-VVSASGDNTLKVW--DLATRQEQRTLTGH 1063

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              +    S SPD   +V  S   G   L V      +++R      +       SP G  
Sbjct: 1064 TSLVTGVSISPDGETVVSAS---GDNTLKVWGLETGEEQRTLTGHTSLVTGVSISPDGQT 1120

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +    +      + V      QE+  +    S +   + SP G++++      GD+  K+
Sbjct: 1121 VVSGSWDNT---LKVWDLATGQEQRTLIGHTSLVTGVSISPDGQTVV---SASGDSTLKV 1174

Query: 419  YSI 421
            + +
Sbjct: 1175 WDL 1177



 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 98/304 (32%), Gaps = 27/304 (8%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V+   ++        P   R         +Y  +  +     + +               
Sbjct: 572 VQSGLRLSSHVLNQHPEQLR-------SQLYGRLLSQNSPDMTALTQSLAQGQGECWIRC 624

Query: 193 LCV-MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L   +++ G  +          +     SP+ Q V  A+ D      + + D       +
Sbjct: 625 LFPHLNQAGGALVRTLTGHTDSVTGVSISPDGQTVVSASRDH----TLKVWDLATGEELR 680

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYS 310
            +    + +     S  G+  ++S  +D+ + ++  DL++      LT         S S
Sbjct: 681 TLTGHTNFVRRVSISPCGQT-VVSASRDKTLKVW--DLETGRELRTLTGHTSSVTGVSIS 737

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +V  S       L V +    +++R      +S      SP G  +         
Sbjct: 738 PDGQTVVSASS---DNTLKVWELETGEEQRTLIGHTSSVTGVSISPDGQTVVSASLDKT- 793

Query: 371 FAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             + V   +   E+  +    S++   + SP  ++++ + +   D   K++ ++      
Sbjct: 794 --LKVWDLETGNEQRTLKGHTSSVFDVSISPDSQTIVSASR---DKTLKVWVLETGNEQR 848

Query: 429 TLIN 432
           TL  
Sbjct: 849 TLTG 852



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 93/259 (35%), Gaps = 15/259 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++VVS    ++L V D                +     SP  Q V  A+ D      + +
Sbjct: 657 QTVVSASRDHTLKVWDLATGEELRTLTGHTNFVRRVSISPCGQTVVSASRDK----TLKV 712

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D    R  + +    S +     S +G+  ++S   D  + ++   L++   +R L   
Sbjct: 713 WDLETGRELRTLTGHTSSVTGVSISPDGQT-VVSASSDNTLKVWE--LETGEEQRTLIGH 769

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                  S SPD   +V  S     + L V      +++R  +   +S FD   SP    
Sbjct: 770 TSSVTGVSISPDGQTVVSASL---DKTLKVWDLETGNEQRTLKGHTSSVFDVSISPDSQT 826

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           I       +   + V++    Q  L      + + + S  G++++ +     D   +++S
Sbjct: 827 IVSASRD-KTLKVWVLETGNEQRTLTGHTDFVYSMSISLDGQTVVSASL---DNTIRVWS 882

Query: 421 IDLNGRNETLINTPAYASD 439
           +     + TL     +  D
Sbjct: 883 LKTGNEHGTLTGHTDFVRD 901



 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 87/251 (34%), Gaps = 17/251 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++VS    N+L V      N  +        +     SP+ Q V  A+ D+     + +
Sbjct: 909  QTIVSSSSDNTLKVWSLKTGNEHHTLKGHTSSVTGVSISPDGQTVVSASRDN----TLKV 964

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             + +  +    +      +     S +G+  ++S  +D  + ++++         L    
Sbjct: 965  WNLKTGKKLCTLIGHTEYVTGVSISPDGQT-VVSASRDNTLKVWNL-KTGKKLCTLIGHT 1022

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  S SPDS  +V  S   G   L V       ++R      +       SP G+ +
Sbjct: 1023 GSVTGESISPDSQTVVSAS---GDNTLKVWDLATRQEQRTLTGHTSLVTGVSISPDGETV 1079

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                        G+  + G ++R L    S +   + SP G++++      G   + L  
Sbjct: 1080 VSASGDNTLKVWGL--ETGEEQRTLTGHTSLVTGVSISPDGQTVV-----SGSWDNTLKV 1132

Query: 421  IDLNGRNETLI 431
             DL    E   
Sbjct: 1133 WDLATGQEQRT 1143



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 112/339 (33%), Gaps = 68/339 (20%)

Query: 82   ISQDSFKQKITNPDSIPRFQDW---------NSLGAQVLVTGRVIKEGKDRLRVE----- 127
            +S     Q + +       + W           +G    VTG V      +  V      
Sbjct: 944  VSISPDGQTVVSASRDNTLKVWNLKTGKKLCTLIGHTEYVTG-VSISPDGQTVVSASRDN 1002

Query: 128  -FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              ++W++K  K++              I HT S      +TGE    +S      ++VVS
Sbjct: 1003 TLKVWNLKTGKKLCTL-----------IGHTGS------VTGESISPDS------QTVVS 1039

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                N+L V D      +        ++     SP+ + V  A+ D+     + +     
Sbjct: 1040 ASGDNTLKVWDLATRQEQRTLTGHTSLVTGVSISPDGETVVSASGDN----TLKVWGLET 1095

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINI 305
                + +    S++     S +G+  ++S   D  + ++  DL +   +R L     +  
Sbjct: 1096 GEEQRTLTGHTSLVTGVSISPDGQT-VVSGSWDNTLKVW--DLATGQEQRTLIGHTSLVT 1152

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              S SPD   +V  S   G   L V        + +S   E ++     +  G  +    
Sbjct: 1153 GVSISPDGQTVVSAS---GDSTLKVWDLETG-MEVMSFTGEGAFRCCEIALDGCTVVAGD 1208

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + G+ + + +                 + P ++  G  +
Sbjct: 1209 YGGQLYFLRL-----------------EGPNFTGDGEVI 1230


>gi|145517103|ref|XP_001444440.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411851|emb|CAK77043.1| unnamed protein product [Paramecium tetraurelia]
          Length = 799

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 57/382 (14%), Positives = 129/382 (33%), Gaps = 51/382 (13%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ----DWNSLGAQVLV--------TGR 115
           ++  +  R      +S   F     +  ++ + Q     W +L    L+           
Sbjct: 350 LIRANFARC----NLSNSQFINVNISGINVNQAQLIGCKWRNLKINELIKLQGHKNSIQS 405

Query: 116 VIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           V      +            LWDVK  +QI      S+P   R +            + +
Sbjct: 406 VCFSPDGKTLASASDDKSIILWDVKTVQQIAKLNGHSNP--VRSVC----------FSHD 453

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
                S   +   +  +     S+ + D      +         +++  FSPN++ +A  
Sbjct: 454 GATLASGSGYPIYNFENDSDDYSIRLWDVKTGQQKAKLNGHCNCVYQVCFSPNRRILASC 513

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D      + L D    +   ++    + + +  FS +G     S   D+++ ++  D 
Sbjct: 514 SDDR----TIRLWDIEKQKQIAKLEGHYNGVQSVSFSPDGSNLA-SGSYDKSVRLW--DP 566

Query: 290 QSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           ++   + + N    ++ S  +SPD + +   S     + + +      +QK       + 
Sbjct: 567 RTGQQKAILNGHQDDVMSVCFSPDGTTLASASK---DKSVRLWDVKTGEQKAKLDGHSSY 623

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                +S  G  +A         +I +      Q+ + +E S++++  +SP G  L    
Sbjct: 624 VMSVNFSSDGATLASGSRD---HSIRLWDVKTGQQTVNLEASSIRSVCFSPDGLILASGS 680

Query: 409 KKDGDTGSKLYSIDLNGRNETL 430
               D    L+ + +   N  +
Sbjct: 681 Y---DNSISLWDVRVAQENAKV 699



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 102/286 (35%), Gaps = 37/286 (12%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
            D      RLWDVK  +Q                 H   + +YQ         N RIL  
Sbjct: 470 NDSDDYSIRLWDVKTGQQKAKLN-----------GH--CNCVYQVCFSP----NRRIL-- 510

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                S     ++ + D +              +    FSP+   +A  +YD      V 
Sbjct: 511 ----ASCSDDRTIRLWDIEKQKQIAKLEGHYNGVQSVSFSPDGSNLASGSYDK----SVR 562

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTN 299
           L D R  +    +   +  +++  FS +G     S  KD+++ ++  D+++   + +L  
Sbjct: 563 LWDPRTGQQKAILNGHQDDVMSVCFSPDGTTLA-SASKDKSVRLW--DVKTGEQKAKLDG 619

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                +S ++S D + +   S R+   +L+    +    ++    + +S     +SP G 
Sbjct: 620 HSSYVMSVNFSSDGATLASGS-RDHSIRLW----DVKTGQQTVNLEASSIRSVCFSPDG- 673

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           LI  +       ++  ++      ++    +  Q   +S  G  L 
Sbjct: 674 LILASGSYDNSISLWDVRVAQENAKVDGHRNIFQQVCFSSDGNKLY 719



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 82/281 (29%), Gaps = 37/281 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWD +  +Q                 H   DD+        G     
Sbjct: 550 SNLASGSYDKSVRLWDPRTGQQKAILN-----------GHQ--DDVMSVCFSPDG----- 591

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ S     S+ + D      +         +    FS +   +A  + D    
Sbjct: 592 -----TTLASASKDKSVRLWDVKTGEQKAKLDGHSSYVMSVNFSSDGATLASGSRDH--- 643

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L D +  +    +    S I +  FS +G   L S   D ++ ++ V +     + 
Sbjct: 644 -SIRLWDVKTGQQTVNL--EASSIRSVCFSPDG-LILASGSYDNSISLWDVRVAQENAK- 698

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +     I     +S D +++   SD    + +         Q         ++    +  
Sbjct: 699 VDGHRNIFQQVCFSSDGNKLYSCSD---DKTIRFWDVKKGQQISKLNGLNQNFQFICFPS 755

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            G+ IA+     +  +I +      Q    + D N    ++
Sbjct: 756 NGNTIAYIC---DDHSINLKDVQTEQLIAKLNDYNGTVLSF 793



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 72/192 (37%), Gaps = 19/192 (9%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYS 310
           ++   ++ I +  FS +GK    S   D+++ ++  D+++     +L        S  +S
Sbjct: 395 KLQGHKNSIQSVCFSPDGKTLA-SASDDKSIILW--DVKTVQQIAKLNGHSNPVRSVCFS 451

Query: 311 PDSSQIV---------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            D + +          FE+D +    + +       QK          +   +SP    I
Sbjct: 452 HDGATLASGSGYPIYNFENDSD-DYSIRLWDVKTGQQKAKLNGHCNCVYQVCFSPN-RRI 509

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +        +  ++K     +L    + +Q+ ++SP G +L        D   +L+  
Sbjct: 510 LASCSDDRTIRLWDIEKQKQIAKLEGHYNGVQSVSFSPDGSNLASGSY---DKSVRLWD- 565

Query: 422 DLNGRNETLINT 433
              G+ + ++N 
Sbjct: 566 PRTGQQKAILNG 577


>gi|254515665|ref|ZP_05127725.1| hypothetical protein NOR53_3058 [gamma proteobacterium NOR5-3]
 gi|219675387|gb|EED31753.1| hypothetical protein NOR53_3058 [gamma proteobacterium NOR5-3]
          Length = 817

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 58/138 (42%), Gaps = 6/138 (4%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F +    P  S +GK   ++ Q      ++ +++++    R+T++  I+    +SPD+  
Sbjct: 52  FANGPTDPAPSPDGKTIALAAQG----WLWLLEIETGIATRITDSAAIDSRPRWSPDNKH 107

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + F  D      + V++ +      I  +      DP +S  G+ + ++  +    +I  
Sbjct: 108 LAFVRDDGQDTAVLVLEVDSGKIAVI--NSPGIELDPEFSADGEYLYYSSGASGSLSIWR 165

Query: 376 MKKDGSQERLLVEDSNLQ 393
                  E+ L +  +++
Sbjct: 166 YHLASGAEQQLTDLPHVE 183



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 75/206 (36%), Gaps = 5/206 (2%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I         I   PR+SP+ + +A+   D +D     ++   +D     + N   + L 
Sbjct: 85  IATRITDSAAIDSRPRWSPDNKHLAFVRDDGQDTA---VLVLEVDSGKIAVINSPGIELD 141

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS++G+    S     ++ I+   L S A ++LT+   +  +    P    I++    
Sbjct: 142 PEFSADGEYLYYSSGASGSLSIWRYHLASGAEQQLTDLPHVERNIRRLPGRDSILYLHGS 201

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--G 380
                L +      +   + Q+    +      P   L  ++      + +  +  D   
Sbjct: 202 RAYRSLRLRDFVSGEDSVVHQETLTYHLTSDAHPTQRLAVYSAPINGDYHLWTIDLDDPR 261

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIF 406
           ++ RL         P +S  G S+ F
Sbjct: 262 ARHRLTDGTRYALTPAFSADGNSIYF 287



 Score = 73.1 bits (178), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 6/130 (4%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              + SPD   I   +       L++++       RI+ D  A    P WSP    +AF 
Sbjct: 57  TDPAPSPDGKTIALAAQ----GWLWLLEIETGIATRIT-DSAAIDSRPRWSPDNKHLAFV 111

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +  G+  A+ V++ D  +  ++        P +S  G  L +S    G      Y +  +
Sbjct: 112 RDDGQDTAVLVLEVDSGKIAVINSPGIELDPEFSADGEYLYYSSGASGSLSIWRYHL-AS 170

Query: 425 GRNETLINTP 434
           G  + L + P
Sbjct: 171 GAEQQLTDLP 180



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 33/107 (30%), Gaps = 5/107 (4%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            +      IL++  S     ++    V   D    +            P      Q++A 
Sbjct: 187 RRLPGRDSILYLHGSRAYRSLRLRDFVSGEDSVVHQETLTYHLTSDAHPT-----QRLAV 241

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            +        ++ +D    RA  R+ +     L P FS++G      
Sbjct: 242 YSAPINGDYHLWTIDLDDPRARHRLTDGTRYALTPAFSADGNSIYFV 288


>gi|313672810|ref|YP_004050921.1| wd40 repeat, subgroup [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939566|gb|ADR18758.1| WD40 repeat, subgroup [Calditerrivibrio nitroreducens DSM 19672]
          Length = 1055

 Score = 93.9 bits (232), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 91/323 (28%), Gaps = 47/323 (14%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            V      R  V        +LWD+   ++I  + F           H +S         
Sbjct: 252 SVAISPDGRYIVSGSWDNTIKLWDITTGREI--RTFSGHT-------HFVSSVA------ 296

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                   I      +VSG   N++ + D                +     SP+ + +  
Sbjct: 297 --------ISLDGRYIVSGSWDNTIKLWDITTGREIRTFSGHTLPVNSVAISPDGRYIVS 348

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
              D+     + L      R  +        + +   S +GK  + S   D+ + ++ + 
Sbjct: 349 GNSDE----TIKLWSITTGREIRTFRGHIGWVNSVAISPDGKYIV-SGSYDDTIKLWDIS 403

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                     +  +   S + SPD   IV  S     + + +       + R  +     
Sbjct: 404 -TGREIRTFKSHTYEVTSVAISPDGRYIVSGSH---DKTIRLWDITTGREIRTFRGHIDW 459

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIF 406
                 SP G  I    +      + +      +E          + +   SP G  ++ 
Sbjct: 460 VNSVAISPDGRYIVSGSYDNT---VKLWDITTGREIRTFSGHTLPVTSVAISPDGIYIV- 515

Query: 407 SRKKDGDTGSKLYSIDLNGRNET 429
                 D   KL+ I   GR   
Sbjct: 516 --SGSSDETIKLWDIS-TGRQIR 535



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 52/325 (16%), Positives = 91/325 (28%), Gaps = 47/325 (14%)

Query: 113 TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
              V      R  V        +LWD+   ++I  + F         +A  IS D     
Sbjct: 82  VTSVAISPDGRYIVSGSYDKTVKLWDITTGREI--RTFKGHTNDVTSVA--ISPD----- 132

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                            +VSG   N++ + D                +     SP+ + +
Sbjct: 133 --------------GRYIVSGSEDNTIRLWDITTGRKIRKFRGHTLPVSSVAISPDGRYI 178

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                       V L D    R  +      + + +   S +G   L S   D+ + ++ 
Sbjct: 179 V----SGGRDNTVKLWDITTGREIRTFKGHTNDVTSVAISPDGMYIL-SGSFDDTVKLWD 233

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +       +  +       S + SPD   IV  S       + +       + R      
Sbjct: 234 I-TTGREIKTFSGHTDYVKSVAISPDGRYIVSGS---WDNTIKLWDITTGREIRTFSGHT 289

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSL 404
                   S  G  I    +      I +      +E          + +   SP GR +
Sbjct: 290 HFVSSVAISLDGRYIVSGSWDNT---IKLWDITTGREIRTFSGHTLPVNSVAISPDGRYI 346

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNET 429
           +     + D   KL+SI   GR   
Sbjct: 347 V---SGNSDETIKLWSI-TTGREIR 367



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 77/247 (31%), Gaps = 18/247 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG   N++ + D                +     SP+ + +   +YD      V L D 
Sbjct: 53  VSGGRDNTVKLWDITTGREIRTFKGHTNDVTSVAISPDGRYIVSGSYDK----TVKLWDI 108

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R  +      + + +   S +G+  + S  +D  + ++ +        +        
Sbjct: 109 TTGREIRTFKGHTNDVTSVAISPDGRYIV-SGSEDNTIRLWDI-TTGRKIRKFRGHTLPV 166

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S + SPD   IV    R+   +L+        + R  +           SP G  I   
Sbjct: 167 SSVAISPDGRYIV-SGGRDNTVKLW--DITTGREIRTFKGHTNDVTSVAISPDGMYILSG 223

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            F      + +      +E           ++   SP GR ++       D   KL+ I 
Sbjct: 224 SFDDT---VKLWDITTGREIKTFSGHTDYVKSVAISPDGRYIVSGSW---DNTIKLWDI- 276

Query: 423 LNGRNET 429
             GR   
Sbjct: 277 TTGREIR 283



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 56/354 (15%), Positives = 109/354 (30%), Gaps = 65/354 (18%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            V      +  V        +LWD+   ++I                 T     Y+ +T 
Sbjct: 378 SVAISPDGKYIVSGSYDDTIKLWDISTGREI----------------RTFKSHTYE-VTS 420

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                + R +      VSG    ++ + D                +     SP+ + +  
Sbjct: 421 VAISPDGRYI------VSGSHDKTIRLWDITTGREIRTFRGHIDWVNSVAISPDGRYIVS 474

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            +YD+     V L D    R  +        + +   S +G   + S   DE + ++  D
Sbjct: 475 GSYDN----TVKLWDITTGREIRTFSGHTLPVTSVAISPDGIYIV-SGSSDETIKLW--D 527

Query: 289 LQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           + +    R T   +T  +  S + SPD   IV  S       + +       + R  +  
Sbjct: 528 ISTGRQIR-TFSGHTNSVYYSVAISPDGRYIVSGSY---DNTVKLWNITTGREIRTFKGH 583

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEK--FAIGV-------MKKDGSQERLLVEDSNLQAPT 396
           +        SP G  I      G    + I         +     +  ++  +    A  
Sbjct: 584 KNFVSSVAISPDGRYIVSGSGDGTVRLWDIATGKEIAQFISFTDGEWIVITPEGYYNA-- 641

Query: 397 WSPSG-RSL-------IFS--RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            SP+G + +       ++     ++      L  + L+G++     T A A  P
Sbjct: 642 -SPNGDKYINVRIGNKVYGIENYREAFYRPDLVKLALSGKSLEGYKTLADAGTP 694



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 56/178 (31%), Gaps = 16/178 (8%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDS 313
              S + +   S +G+  + S  +D  + ++  D+ +    R       +  S + SPD 
Sbjct: 35  GHTSSVTSVAISPDGRYIV-SGGRDNTVKLW--DITTGREIRTFKGHTNDVTSVAISPDG 91

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             IV  S     + + +       + R  +           SP G  I           I
Sbjct: 92  RYIVSGSY---DKTVKLWDITTGREIRTFKGHTNDVTSVAISPDGRYIVSGSEDNT---I 145

Query: 374 GVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            +      ++          + +   SP GR ++       D   KL+ I   GR   
Sbjct: 146 RLWDITTGRKIRKFRGHTLPVSSVAISPDGRYIV---SGGRDNTVKLWDI-TTGREIR 199



 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 29/91 (31%), Gaps = 9/91 (9%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWS 398
           +     +S      SP G  I      G    + +      +E        +++ +   S
Sbjct: 32  VQLGHTSSVTSVAISPDGRYIV---SGGRDNTVKLWDITTGREIRTFKGHTNDVTSVAIS 88

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           P GR ++       D   KL+ I   GR   
Sbjct: 89  PDGRYIVSGSY---DKTVKLWDI-TTGREIR 115


>gi|110598068|ref|ZP_01386347.1| WD40-like Beta Propeller [Chlorobium ferrooxidans DSM 13031]
 gi|110340327|gb|EAT58821.1| WD40-like Beta Propeller [Chlorobium ferrooxidans DSM 13031]
          Length = 334

 Score = 93.5 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 78/213 (36%), Gaps = 34/213 (15%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           AP  S+ G+      + +    I+   L  +   +LT     +   + SPD  ++ F   
Sbjct: 25  APSGSNAGEIVAFVRKGN----IWIARLDGSGQRQLT-GSGRDTHPALSPDGKEVAFCRR 79

Query: 322 RE-------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----KFSGE 369
            E       G  QL+++++ G   +++  +   +  DP +SP G  + F      + +G+
Sbjct: 80  TETEIYPDTGFGQLFMVETKGGTPRKVRFEGVLAAEDPAFSPDGKSLLFVGLSELRRAGK 139

Query: 370 KFAI---GVMKKDGSQERL-------------LVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           K  +     M     + R              L        P +SP G+S+++ ++   D
Sbjct: 140 KGELQAFATMSITIGESRTGKCRPVVQRKNSMLDAGYIYSNPAFSPDGKSILW-QESGSD 198

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                  IDLNG+             P W   +
Sbjct: 199 VSGGFAIIDLNGKRLFRYPLKGSDFTPYWRPAL 231



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 57/290 (19%), Positives = 106/290 (36%), Gaps = 45/290 (15%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD----DEDILRVYLMDT 244
            K ++ +   DG+  R LT         P  SP+ ++VA+          D     L   
Sbjct: 39  RKGNIWIARLDGSGQRQLT--GSGRDTHPALSPDGKEVAFCRRTETEIYPDTGFGQLFMV 96

Query: 245 RIDRAPKRIGNFRSMILA--PRFSSNGKRALI--------SVQKDEAMDIYSVDL----- 289
                  R   F  ++ A  P FS +GK  L         + +K E     ++ +     
Sbjct: 97  ETKGGTPRKVRFEGVLAAEDPAFSPDGKSLLFVGLSELRRAGKKGELQAFATMSITIGES 156

Query: 290 QSNATERLT-------NTLFINISASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQK 339
           ++     +        +  +I  + ++SPD   I+++   SD  G   +  +  NG    
Sbjct: 157 RTGKCRPVVQRKNSMLDAGYIYSNPAFSPDGKSILWQESGSDVSGGFAI--IDLNGKRLF 214

Query: 340 R--ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK--DGSQERLLVEDSNLQAP 395
           R  +       Y+ P  S  G  I     +  + A+  +      +Q ++LV       P
Sbjct: 215 RYPLKGSDFTPYWRPALSSDGHRILCYSPATTEAAVDTIHLINRRTQRKILVTSGTN--P 272

Query: 396 TWSPSGRSLIFSRKKD---GDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
            +  +G +++F R ++    +  S L+ + L  G     I T   AS+P 
Sbjct: 273 VFIRNGSAILFERGENRWSSNASSNLWLLALQPGAVAKQIIT--DASEPA 320



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 85/268 (31%), Gaps = 43/268 (16%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             +    P  S   + VA+    +       +   R+D + +R          P  S +G
Sbjct: 19  STEPAAAPSGSNAGEIVAFVRKGN-------IWIARLDGSGQRQLTGSGRDTHPALSPDG 71

Query: 270 KRALISVQKD-------EAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFES- 320
           K      + +           ++ V+ +     ++     +     ++SPD   ++F   
Sbjct: 72  KEVAFCRRTETEIYPDTGFGQLFMVETKGGTPRKVRFEGVLAAEDPAFSPDGKSLLFVGL 131

Query: 321 ---DREGK---------EQLYVMQSNGSDQKRISQDKE------ASYFDPVWSPQGDLIA 362
               R GK           + + +S     + + Q K         Y +P +SP G  I 
Sbjct: 132 SELRRAGKKGELQAFATMSITIGESRTGKCRPVVQRKNSMLDAGYIYSNPAFSPDGKSIL 191

Query: 363 F-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP----SGRSLI-FSRKKDGDTGS 416
           +    S       ++  +G +        +   P W P     G  ++ +S         
Sbjct: 192 WQESGSDVSGGFAIIDLNGKRLFRYPLKGSDFTPYWRPALSSDGHRILCYSPATTEAAVD 251

Query: 417 KLYSIDLNGRNETLINT---PAYASDPQ 441
            ++ I+   + + L+ +   P +  +  
Sbjct: 252 TIHLINRRTQRKILVTSGTNPVFIRNGS 279


>gi|113478009|ref|YP_724070.1| WD-40 repeat-containing protein [Trichodesmium erythraeum IMS101]
 gi|110169057|gb|ABG53597.1| WD-40 repeat [Trichodesmium erythraeum IMS101]
          Length = 1510

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 62/329 (18%), Positives = 121/329 (36%), Gaps = 36/329 (10%)

Query: 104  NSLGAQVLVTGRVIKEGKDRLRVEF----RLWDVKDRKQIIGKKFFSSPA------SWRK 153
              L   +++      +GK      +    RLWD ++ K +      SS          + 
Sbjct: 1127 TLLHQDLVIAVAFSPDGKTIATASWDKTARLWDTENGKVLATLNHQSSVRAVAFSPDGKT 1186

Query: 154  IAHTISDDIYQSITGEKG---------DFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            IA   SD   +    E G            + + F  +        +       D  N +
Sbjct: 1187 IATASSDKTARLWDTENGKVLATLNHQSSVNAVAFSPDGKTIATASSDKTARLWDTENGK 1246

Query: 205  YL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             L T +    +    FSP+ + +A A+ D        L DT   +    + N +S + A 
Sbjct: 1247 VLATLNHQSSVRAVAFSPDGKTIATASSDK----TARLWDTENGKVLATL-NHQSRVFAV 1301

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             FS +GK    +   D+   ++  D ++       N  F   + ++SPD   I   +  +
Sbjct: 1302 AFSPDGKTIA-TASSDKTARLW--DTENGNVLATLNHQFWVNAVAFSPDGKTIA-TASSD 1357

Query: 324  GKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               +L+    +  + K + + + ++  F   +SP G  IA T  S +   +    ++G +
Sbjct: 1358 KTARLW----DTENGKVLATLNHQSRVFAVAFSPDGKTIA-TASSDKTARLW-DTENGKE 1411

Query: 383  ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
               L   S + A  +SP G+++  +   +
Sbjct: 1412 LATLNHQSLVNAVAFSPDGKTIATANYDN 1440



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 66/335 (19%), Positives = 128/335 (38%), Gaps = 40/335 (11%)

Query: 129  RLWDVKDRKQIIGKKFFSS------PASWRKIAHTISDDIYQSITGEKG---------DF 173
            RLWD ++ K++      SS          + IA   SD   +    E G         D+
Sbjct: 951  RLWDTENGKELATLNHQSSVIAVAFSPDGKTIATASSDKTARLWDTENGNVLATLNHQDW 1010

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
               + F  +        +       D  N + L T +    +    FSP+ + +A A+ D
Sbjct: 1011 VIAVAFSPDGKTIATASSDKTARLWDTENGKVLATLNHQSSVNAVAFSPDGKTIATASSD 1070

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                    L DT   +    + N +S + A  FS +GK    +   D+   ++  D ++ 
Sbjct: 1071 K----TARLWDTENGKVLATL-NHQSSVRAVAFSPDGKTIA-TASYDKTARLW--DTENG 1122

Query: 293  A--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASY 349
                  L   L I +  ++SPD   I   +  +   +L+    +  + K + + + ++S 
Sbjct: 1123 NVLATLLHQDLVIAV--AFSPDGKTIA-TASWDKTARLW----DTENGKVLATLNHQSSV 1175

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +SP G  IA T  S +   +    ++G     L   S++ A  +SP G+++  +  
Sbjct: 1176 RAVAFSPDGKTIA-TASSDKTARLW-DTENGKVLATLNHQSSVNAVAFSPDGKTIATASS 1233

Query: 410  KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               D  ++L+  + NG+    +N  +      +  
Sbjct: 1234 ---DKTARLWDTE-NGKVLATLNHQSSVRAVAFSP 1264



 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 55/295 (18%), Positives = 110/295 (37%), Gaps = 46/295 (15%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWD ++   +      SS  +                          + F  +      
Sbjct: 869  RLWDTENGNVLATLNHQSSVNA--------------------------VAFSPDGKTIAT 902

Query: 189  IKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                      D  N + L T +    +    FSP+ + +A A+YD        L DT   
Sbjct: 903  ASYDKTARLWDTENGKELATLNHQDWVNAVAFSPDGKTIATASYDK----TARLWDTENG 958

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            +    + N +S ++A  FS +GK    +   D+   ++  D ++       N     I+ 
Sbjct: 959  KELATL-NHQSSVIAVAFSPDGKTIA-TASSDKTARLW--DTENGNVLATLNHQDWVIAV 1014

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPD   I   +  +   +L+    +  + K + + + ++S     +SP G  IA T  
Sbjct: 1015 AFSPDGKTIA-TASSDKTARLW----DTENGKVLATLNHQSSVNAVAFSPDGKTIA-TAS 1068

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            S +   +    ++G     L   S+++A  +SP G+++  +     D  ++L+  
Sbjct: 1069 SDKTARLW-DTENGKVLATLNHQSSVRAVAFSPDGKTIATASY---DKTARLWDT 1119



 Score = 91.6 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 60/311 (19%), Positives = 119/311 (38%), Gaps = 37/311 (11%)

Query: 129  RLWDVKDRKQIIGKKFFSSPA------SWRKIAHTISDDIYQSITGEKGD--------FN 174
            RLWD ++ K +      SS          + IA   SD   +    E G          +
Sbjct: 1033 RLWDTENGKVLATLNHQSSVNAVAFSPDGKTIATASSDKTARLWDTENGKVLATLNHQSS 1092

Query: 175  SRILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
             R +  S    +        +  + D +  N+      +D ++    FSP+ + +A A++
Sbjct: 1093 VRAVAFSPDGKTIATASYDKTARLWDTENGNVLATLLHQDLVIAV-AFSPDGKTIATASW 1151

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D        L DT   +    + N +S + A  FS +GK    +   D+   ++  D ++
Sbjct: 1152 DK----TARLWDTENGKVLATL-NHQSSVRAVAFSPDGKTIA-TASSDKTARLW--DTEN 1203

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYF 350
                   N      + ++SPD   I   +  +   +L+    +  + K + + + ++S  
Sbjct: 1204 GKVLATLNHQSSVNAVAFSPDGKTIA-TASSDKTARLW----DTENGKVLATLNHQSSVR 1258

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               +SP G  IA T  S +   +    ++G     L   S + A  +SP G+++  +   
Sbjct: 1259 AVAFSPDGKTIA-TASSDKTARLW-DTENGKVLATLNHQSRVFAVAFSPDGKTIATASS- 1315

Query: 411  DGDTGSKLYSI 421
              D  ++L+  
Sbjct: 1316 --DKTARLWDT 1324



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 64/339 (18%), Positives = 130/339 (38%), Gaps = 48/339 (14%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAH-----TISDDIYQSITGEKGDFNSRIL----- 178
            RLWD ++ K +      SS    R +A      TI+   Y          N  +L     
Sbjct: 1074 RLWDTENGKVLATLNHQSS---VRAVAFSPDGKTIATASYDKTARLWDTENGNVLATLLH 1130

Query: 179  ---FVSESVVSGIIKNSLCVMD-----RDGANIRYL-TPSRDQILFEPRFSPNQQKVAYA 229
                ++ +        +    D      D  N + L T +    +    FSP+ + +A A
Sbjct: 1131 QDLVIAVAFSPDGKTIATASWDKTARLWDTENGKVLATLNHQSSVRAVAFSPDGKTIATA 1190

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            + D        L DT   +    + N +S + A  FS +GK    +   D+   ++  D 
Sbjct: 1191 SSDK----TARLWDTENGKVLATL-NHQSSVNAVAFSPDGKTIA-TASSDKTARLW--DT 1242

Query: 290  QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEAS 348
            ++       N      + ++SPD   I   +  +   +L+    +  + K + + + ++ 
Sbjct: 1243 ENGKVLATLNHQSSVRAVAFSPDGKTIA-TASSDKTARLW----DTENGKVLATLNHQSR 1297

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             F   +SP G  IA T  S +   +    ++G+    L     + A  +SP G+++  + 
Sbjct: 1298 VFAVAFSPDGKTIA-TASSDKTARLW-DTENGNVLATLNHQFWVNAVAFSPDGKTIATAS 1355

Query: 409  KKDGDTGSKLYSIDLNGR------NETLINTPAYASDPQ 441
                D  ++L+  + NG+      +++ +   A++ D +
Sbjct: 1356 S---DKTARLWDTE-NGKVLATLNHQSRVFAVAFSPDGK 1390



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 93/228 (40%), Gaps = 20/228 (8%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ + +A A+ D        L DT        + N +S + A  FS +GK    +  
Sbjct: 851  AFSPDGKTIATASLDK----TARLWDTENGNVLATL-NHQSSVNAVAFSPDGKTIA-TAS 904

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D+   ++  D ++       N      + ++SPD   I   S  +   +L+    +  +
Sbjct: 905  YDKTARLW--DTENGKELATLNHQDWVNAVAFSPDGKTIATASY-DKTARLW----DTEN 957

Query: 338  QKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             K + + + ++S     +SP G  IA T  S +   +    ++G+    L     + A  
Sbjct: 958  GKELATLNHQSSVIAVAFSPDGKTIA-TASSDKTARLW-DTENGNVLATLNHQDWVIAVA 1015

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            +SP G+++  +     D  ++L+  + NG+    +N  +  +   +  
Sbjct: 1016 FSPDGKTIATASS---DKTARLWDTE-NGKVLATLNHQSSVNAVAFSP 1059



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 66/168 (39%), Gaps = 16/168 (9%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +S + A  FS +GK    +   D+   ++  D ++       N      + ++SPD   
Sbjct: 843 HQSDVYAVAFSPDGKTIA-TASLDKTARLW--DTENGNVLATLNHQSSVNAVAFSPDGKT 899

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           I   S  +   +L+    +  + K + + + +       +SP G  IA   +        
Sbjct: 900 IATASY-DKTARLW----DTENGKELATLNHQDWVNAVAFSPDGKTIATASYDKTA---R 951

Query: 375 VMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +    +G +   L   S++ A  +SP G+++  +     D  ++L+  
Sbjct: 952 LWDTENGKELATLNHQSSVIAVAFSPDGKTIATASS---DKTARLWDT 996



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 41/104 (39%), Gaps = 8/104 (7%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPS 400
           +   ++  +   +SP G  IA            +    +G+    L   S++ A  +SP 
Sbjct: 840 TLKHQSDVYAVAFSPDGKTIATASLDKTA---RLWDTENGNVLATLNHQSSVNAVAFSPD 896

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           G+++  +     D  ++L+  + NG+    +N   + +   +  
Sbjct: 897 GKTIATASY---DKTARLWDTE-NGKELATLNHQDWVNAVAFSP 936


>gi|328884293|emb|CCA57532.1| hypothetical protein SVEN_4246 [Streptomyces venezuelae ATCC 10712]
          Length = 575

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 50/291 (17%), Positives = 105/291 (36%), Gaps = 33/291 (11%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI----LFEPRFSPNQQKVAYA 229
             R++F     V G+  +S+  ++ DG + R L PS   +    +    +SP+  ++A+ 
Sbjct: 56  KPRVVFTEYKTVDGVRHSSIITVNTDGTDRRTLVPSGPGLTPADISGVSYSPDGLRMAFI 115

Query: 230 TYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQK---DEAMDIY 285
             D    + V   D R  R  +  +      +    ++ +GK+  +S +     + + I 
Sbjct: 116 NNDGYGDIWVADADGRNARPVRMDVDEPDGWLTGLDWTPDGKQLYLSFRGKPGHDRLRIM 175

Query: 286 SVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRIS 342
            V+L       +  +     +     + D  +I F         +       G + ++++
Sbjct: 176 RVNLDGTGLGYVFASPERTWDTQVDVAWDG-RITFLR----GSTIRTWDPRVGGEPQQVA 230

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                    P +SP G+ +AF  +    + +     DG  E  L +  N+  P WSP G 
Sbjct: 231 YG-----LHPTFSPDGERLAFAAYVDGAYDVRARVLDGGAEYSLSKGKNVLFPEWSPDGS 285

Query: 403 SLIF------------SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            + +            S    G T   L + D    + + +    ++    
Sbjct: 286 QVAYLSGGTEQQATVSSATAPGSTPKNLSAPDTTAADLSWVTPRGWSPHGT 336


>gi|148657636|ref|YP_001277841.1| peptidase S9 prolyl oligopeptidase [Roseiflexus sp. RS-1]
 gi|148569746|gb|ABQ91891.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Roseiflexus sp. RS-1]
          Length = 697

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 64/290 (22%), Positives = 106/290 (36%), Gaps = 44/290 (15%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              G     L V+ RDG   R LT S  Q +  P +SP+ + +A+ +  +          
Sbjct: 84  RGRGDQTPQLYVIRRDGGESRCLT-SLPQGVSHPAWSPDGRWIAFLSRLNAAERAREDAG 142

Query: 244 TRIDRAP-----KRIGNFRSMILAPRFSSNGKRAL--------ISVQKDEAMDIYSVDL- 289
                 P     K+I   R      RF     R +        +    D    IY +D+ 
Sbjct: 143 ESEPTPPDEFTRKQIAERRKYEEERRFDP---RVVRRLPYRAGVDFFDDRYAQIYLIDVP 199

Query: 290 -----QSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLY--------VMQSN 334
                 +    R+T+      +  + PD   ++  + R  EG  Q +        VM   
Sbjct: 200 EDDDDPAPQPRRITDADLDFGAPVWMPDGQALLTTATRNPEGDSQFFFFDVLRVPVMPEG 259

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSGEKFA----IGVMKKDGSQERLLV-- 387
            ++ +R++     +Y++P  SP G LIA      G+ F+    + VM   G   R L   
Sbjct: 260 RAEPQRLTAPGF-TYWNPRPSPDGRLIACLRAPEGQPFSAGTLLAVMDASGGALRDLTAA 318

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAY 436
            D +++A  W P G  L+      G     L+ + L+G   + L   P  
Sbjct: 319 TDLSIEAFDWLPDGDGLLCLAAYRG--AQPLWRVALDGSGCQRLDQMPGD 366



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 43/116 (37%), Gaps = 9/116 (7%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSP 311
             +  P+   +G+         +         I+          R T+ +  + S  +SP
Sbjct: 17  GWLEDPQVCPDGRVVAFVRVTIDRPANANRRAIWIAPTDGGPPRRFTSGV-NDTSPRWSP 75

Query: 312 DSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           D   + F   R     QLYV++ +G + + ++   +     P WSP G  IAF   
Sbjct: 76  DGRWLAFVRGRGDQTPQLYVIRRDGGESRCLTSLPQG-VSHPAWSPDGRWIAFLSR 130



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 10/112 (8%)

Query: 306 SASYSPDSSQIVFES---DREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                PD   + F     DR        +++  ++G   +R +     +   P WSP G 
Sbjct: 21  DPQVCPDGRVVAFVRVTIDRPANANRRAIWIAPTDGGPPRRFTSG--VNDTSPRWSPDGR 78

Query: 360 LIAFTKFSGEK-FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
            +AF +  G++   + V+++DG + R L      +  P WSP GR + F  +
Sbjct: 79  WLAFVRGRGDQTPQLYVIRRDGGESRCLTSLPQGVSHPAWSPDGRWIAFLSR 130



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 90/255 (35%), Gaps = 28/255 (10%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           R   L +P+  P+ + VA+     +       R   +       P+R  +      +PR+
Sbjct: 15  RLGWLEDPQVCPDGRVVAFVRVTIDRPANANRRAIWIAPTDGGPPRRFTSGV-NDTSPRW 73

Query: 266 SSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--- 321
           S +G+       + D+   +Y +      +  LT+        ++SPD   I F S    
Sbjct: 74  SPDGRWLAFVRGRGDQTPQLYVIRRDGGESRCLTSLPQGVSHPAWSPDGRWIAFLSRLNA 133

Query: 322 ----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAI 373
               RE   +      +   +K+I++ ++              + +      F      I
Sbjct: 134 AERAREDAGESEPTPPDEFTRKQIAERRKYEEERRFDPRVVRRLPYRAGVDFFDDRYAQI 193

Query: 374 GVM-------KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            ++              R+   D +  AP W P G++L+ +  ++ +  S+ +  D+   
Sbjct: 194 YLIDVPEDDDDPAPQPRRITDADLDFGAPVWMPDGQALLTTATRNPEGDSQFFFFDV--- 250

Query: 427 NETLINTPAYASDPQ 441
              +   P   ++PQ
Sbjct: 251 -LRVPVMPEGRAEPQ 264



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 14/113 (12%)

Query: 347 ASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
               DP   P G ++AF +       +  + AI +   DG   R      N  +P WSP 
Sbjct: 17  GWLEDPQVCPDGRVVAFVRVTIDRPANANRRAIWIAPTDGGPPRRFTSGVNDTSPRWSPD 76

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGFM 446
           GR L F R + GD   +LY I  +G     + +       PA++ D +W+ F+
Sbjct: 77  GRWLAFVRGR-GDQTPQLYVIRRDGGESRCLTSLPQGVSHPAWSPDGRWIAFL 128



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 20/63 (31%), Gaps = 4/63 (6%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           L     L+ P   P GR + F R    +        ++    +G       +    + P+
Sbjct: 13  LYRLGWLEDPQVCPDGRVVAFVRVTIDRPANANRRAIWIAPTDGGPPRRFTSGVNDTSPR 72

Query: 442 WVG 444
           W  
Sbjct: 73  WSP 75


>gi|163749958|ref|ZP_02157202.1| protease, putative [Shewanella benthica KT99]
 gi|161330232|gb|EDQ01213.1| protease, putative [Shewanella benthica KT99]
          Length = 1094

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 109/297 (36%), Gaps = 36/297 (12%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---- 228
           ++ R+ FVS+S  +      +  M  DG   +  T   D  +   R   N  ++ +    
Sbjct: 225 WDDRLYFVSDSDGNDN----IWSMTLDGKAFKQHTQFTDWQVRGARI--NNGRIVFQQGA 278

Query: 229 ------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                    +    L + L+     R    + +      + R S +  + +I+ +     
Sbjct: 279 DIKLYDIAANSSRTLDINLVSDFPQRREHWVNDPMKYATSTRLSPSASKVVITAR----S 334

Query: 283 DIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKR 340
            +       +    L         +A  SPD   +   SD  G+++++   ++G +  K+
Sbjct: 335 HVAVAATDGSRLVELALPGSSRIRNAVMSPDGKWVYGISDASGEQEIWRFPADGGNGAKQ 394

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
           ++ +          SP G  IA   + G    + ++    ++ + ++       P     
Sbjct: 395 LTDNGHTLRMSLSVSPDGRYIASDDYDG---NVWLLDLKKNRHKKIITQGEGLGPYADIV 451

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLIN------TPAYASDPQWVGFM 446
           WS   + +  ++ + G    ++    L   R ETL +      +PA+++D  W+ F+
Sbjct: 452 WSGDSQFIAVTKLEMGKPRPQIVLYSLAKQRAETLTSDKYESYSPAFSTDGHWLYFL 508



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 98/280 (35%), Gaps = 35/280 (12%)

Query: 99  RFQDWNSLGAQVLVTGRVIKEGKDRLR----VEFRLWDVKDRK-QIIGKKFFSSPASWRK 153
           +F DW   GA         +    R+      + +L+D+     + +     S     R+
Sbjct: 256 QFTDWQVRGA---------RINNGRIVFQQGADIKLYDIAANSSRTLDINLVSDFPQRRE 306

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
             H ++D +  + +       S+++  + S V         V   DG+ +  L       
Sbjct: 307 --HWVNDPMKYATSTRLSPSASKVVITARSHV--------AVAATDGSRLVELALPGSSR 356

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRA 272
           +     SP+ + V Y   D      ++          K++  N  ++ ++   S +G+  
Sbjct: 357 IRNAVMSPDGKWV-YGISDASGEQEIWRFPADGGNGAKQLTDNGHTLRMSLSVSPDGRYI 415

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDREGK--EQ 327
                 D   +++ +DL+ N  +++      L       +S DS  I       GK   Q
Sbjct: 416 A---SDDYDGNVWLLDLKKNRHKKIITQGEGLGPYADIVWSGDSQFIAVTKLEMGKPRPQ 472

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + +        + ++ DK  SY  P +S  G  + F    
Sbjct: 473 IVLYSLAKQRAETLTSDKYESY-SPAFSTDGHWLYFLSDR 511



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 71/197 (36%), Gaps = 22/197 (11%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               +R+ +  +  L    S +G         + + ++Y + ++    +R++        
Sbjct: 58  QSQAQRLTSLPAEELGATVSKDGDWVAYVANYEGSSEVYVIPIKGGQAKRISFENSRVRV 117

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             ++ D   +    +  G    +V++S   D         A   +     +G+ + FT+F
Sbjct: 118 QGWTADGQVLYATDNAFGPANYWVLRSVNPDTLETQDLPLADAIEGTIDDKGEYLYFTRF 177

Query: 367 ----SGEKFAIGVMKKDG----------SQERLLVED--SNLQAPT-WSPSGRSLIFSRK 409
               +G+   +      G          ++ + L  D   +++ P  W    R L F   
Sbjct: 178 GLQATGDNVKVYRGGAKGELWRFKLGSKTEAQRLTSDHIGSVRHPMLW--DDR-LYFVSD 234

Query: 410 KDGDTGSKLYSIDLNGR 426
            DG     ++S+ L+G+
Sbjct: 235 SDG--NDNIWSMTLDGK 249



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 72/207 (34%), Gaps = 26/207 (12%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                   AP  S N    + + + D    +++  L  +  +RLT+     + A+ S D 
Sbjct: 27  TIHPGYFRAPALSDN--TLVFTAEGD----LWTKKLGQSQAQRLTSLPAEELGATVSKDG 80

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             + + ++ EG  ++YV+   G   KRIS +  +      W+  G ++  T  +      
Sbjct: 81  DWVAYVANYEGSSEVYVIPIKGGQAKRISFE-NSRVRVQGWTADGQVLYATDNAFGPANY 139

Query: 374 GV---MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-----------KDGDTGSKLY 419
            V   +  D  + + L     ++  T    G  L F+R              G    +L+
Sbjct: 140 WVLRSVNPDTLETQDLPLADAIEG-TIDDKGEYLYFTRFGLQATGDNVKVYRGGAKGELW 198

Query: 420 SIDLNGRNETLINTP---AYASDPQ-W 442
              L  + E    T         P  W
Sbjct: 199 RFKLGSKTEAQRLTSDHIGSVRHPMLW 225



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 81/242 (33%), Gaps = 27/242 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G +      S          S +   VAY   + E    VY++  +  +A KRI    S 
Sbjct: 57  GQSQAQRLTSLPAEELGATVSKDGDWVAYVA-NYEGSSEVYVIPIKGGQA-KRISFENSR 114

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYS---VDLQSNATERLTNTLFINISASYSPDSSQI 316
           +    ++++G+    +       + +    V+  +  T+ L     I    +       +
Sbjct: 115 VRVQGWTADGQVLYATDNAFGPANYWVLRSVNPDTLETQDLPLADAI--EGTIDDKGEYL 172

Query: 317 VFES------------DREG-KEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIA 362
            F               R G K +L+  +    ++ +R++ D   S   P+       + 
Sbjct: 173 YFTRFGLQATGDNVKVYRGGAKGELWRFKLGSKTEAQRLTSDHIGSVRHPMLWDD--RLY 230

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           F   S     I  M  DG   +   + ++ Q      +   ++F +  D     KLY I 
Sbjct: 231 FVSDSDGNDNIWSMTLDGKAFKQHTQFTDWQVRGARINNGRIVFQQGAD----IKLYDIA 286

Query: 423 LN 424
            N
Sbjct: 287 AN 288



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 97/295 (32%), Gaps = 44/295 (14%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +    + + V+   G   + ++    ++  +  ++ + Q V YAT +       +++ 
Sbjct: 86  VANYEGSSEVYVIPIKGGQAKRISFENSRVRVQ-GWTADGQ-VLYATDNAFGPANYWVLR 143

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-------------VQKDEAMDIYSVDLQ 290
           +      +      +  +       G+    +              +     +++   L 
Sbjct: 144 SVNPDTLETQDLPLADAIEGTIDDKGEYLYFTRFGLQATGDNVKVYRGGAKGELWRFKLG 203

Query: 291 SN-ATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           S    +RLT + +          D  ++ F SD +G + ++ M  +G   K+ +Q  +  
Sbjct: 204 SKTEAQRLTSDHIGSVRHPMLWDD--RLYFVSDSDGNDNIWSMTLDGKAFKQHTQFTDWQ 261

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTW--------- 397
                       I F    G    +  +  + S+     LV D   +   W         
Sbjct: 262 VRGARI--NNGRIVF--QQGADIKLYDIAANSSRTLDINLVSDFPQRREHWVNDPMKYAT 317

Query: 398 ----SPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               SPS   ++ + +         GS+L  + L G +   I     + D +WV 
Sbjct: 318 STRLSPSASKVVITARSHVAVAATDGSRLVELALPGSS--RIRNAVMSPDGKWVY 370



 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 23/225 (10%), Positives = 70/225 (31%), Gaps = 35/225 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + Q +A    +        ++ +   +  + + + +    +P FS++G      +  
Sbjct: 452 WSGDSQFIAVTKLEMGKPRPQIVLYSLAKQRAETLTSDKYESYSPAFSTDGHWLYF-LSD 510

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-------------------- 318
            +     +          + +      + +   D+ +  F                    
Sbjct: 511 RQFNSTPTSPWGDRNLGPMFDKRSQIFALALDKDA-RFAFQKPNELFKPEADDKDKTSSN 569

Query: 319 --ESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
               D +G  ++L+ +     +   ++ +K+  YF    + +G           K  + +
Sbjct: 570 KVTVDWDGLSQRLWQVPVASGNYSALTANKDGLYFLDRAAARG----------SKSNLKL 619

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +K D    ++ +    + + + S  G  L   +   G     +  
Sbjct: 620 VKFDPLSPKVEIFAKGVASYSLSADGEKLFIRKSNHGGKDMLIVD 664


>gi|212634248|ref|YP_002310773.1| peptidase S41 [Shewanella piezotolerans WP3]
 gi|212555732|gb|ACJ28186.1| Peptidase S41 [Shewanella piezotolerans WP3]
          Length = 1093

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 116/297 (39%), Gaps = 36/297 (12%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---- 228
           + SR+ F+S+S  +      +  M  DG +++  T  ++  +   +   N+ ++ +    
Sbjct: 226 WQSRVYFISDSDGNDN----IWSMSVDGKDLQQHTHYKEWQVRSAKL--NEGRIVFQQGA 279

Query: 229 ------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                    + E ++ + L+     +    + +      + +F+    R +I+ +     
Sbjct: 280 DIKLFDIASNKEQVVDIELISDFAHKREHWVSDPMKYATSTKFTPQSDRVVITAR----S 335

Query: 283 DIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-R 340
            +           +L       + +A  S D   +   SD  G+++++   ++GSD++ +
Sbjct: 336 QVAIASTDGQRLVQLMIPADSRVRNAIMSKDGQWVYGISDISGEQEIWRFAADGSDKRKQ 395

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
           ++ + +A       SP G  +A   + G    + ++     +++ ++       P     
Sbjct: 396 LTDNGKALRMGLHLSPDGRYLAHDDYDG---NVWLLDLKKGRDKKIIIQGEGLGPYADIV 452

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGFM 446
           WS   + +  ++ + G   +++    L+      + T       P+++ D  W+ F+
Sbjct: 453 WSGDSQFIALTKAEIGKNRTQIVLYSLDKNKAQALTTDKYESFSPSFSKDGDWLYFL 509



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 59/136 (43%), Gaps = 19/136 (13%)

Query: 257 RSMILAPRFSSN--------------GKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            +M +AP F+S+               +  + + + D    +++ DL  +   RLT+   
Sbjct: 15  GTMNIAPSFASDSSDKAGYFRAPALNNQTLVFTAEGD----LWTKDLTESKARRLTSLPA 70

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             + A+ SPD   + + ++ EG  ++YV+  +G   KR+S +  +      W+  G ++ 
Sbjct: 71  EELGATISPDGQSVAYVANYEGSSEVYVIAIDGGQAKRVSFE-NSRVRVQGWTRDGKILY 129

Query: 363 FTKFSGEKFAIGVMKK 378
            T  +       V++ 
Sbjct: 130 ATDNAFGPANYWVLRT 145



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 82/248 (33%), Gaps = 20/248 (8%)

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
            + +L+D+   K+                AH         ++       S         V
Sbjct: 279 ADIKLFDIASNKE-----QVVDIELISDFAHKR----EHWVSDPMKYATSTKFTPQSDRV 329

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
               ++ + +   DG  +  L    D  +     S + Q V Y   D      ++     
Sbjct: 330 VITARSQVAIASTDGQRLVQLMIPADSRVRNAIMSKDGQWV-YGISDISGEQEIWRFAAD 388

Query: 246 IDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTL 301
                K++  N +++ +    S +G+        D   +++ +DL+    +++      L
Sbjct: 389 GSDKRKQLTDNGKALRMGLHLSPDGRYLA---HDDYDGNVWLLDLKKGRDKKIIIQGEGL 445

Query: 302 FINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                  +S DS  I       GK   Q+ +   + +  + ++ DK  S F P +S  GD
Sbjct: 446 GPYADIVWSGDSQFIALTKAEIGKNRTQIVLYSLDKNKAQALTTDKYES-FSPSFSKDGD 504

Query: 360 LIAFTKFS 367
            + F    
Sbjct: 505 WLYFLSNR 512



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 70/202 (34%), Gaps = 22/202 (10%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +   +R+ +  +  L    S +G+        + + ++Y + +     +R++       
Sbjct: 58  TESKARRLTSLPAEELGATISPDGQSVAYVANYEGSSEVYVIAIDGGQAKRVSFENSRVR 117

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              ++ D   +    +  G    +V+++        +    A   + V   Q + + FT+
Sbjct: 118 VQGWTRDGKILYATDNAFGPANYWVLRTVDPANLVTTDLPLADAIEGVIDEQNEYVYFTR 177

Query: 366 -------------FSGEKFAIGVMKKDGSQE-RLL--VEDSNLQAPT-WSPSGRSLIFSR 408
                          G K  +   K    QE + L    + +++ P  W      + F  
Sbjct: 178 FGLQTTGDNAKVYRGGAKGELWRFKLGDKQEAQQLAATHNGSVRQPMLWQ---SRVYFIS 234

Query: 409 KKDGDTGSKLYSIDLNGRNETL 430
             DG     ++S+ ++G++   
Sbjct: 235 DSDG--NDNIWSMSVDGKDLQQ 254



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 86/259 (33%), Gaps = 32/259 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L   D   +  R LT S          SP+ Q VAY   + E    VY++     +A K
Sbjct: 51  DLWTKDLTESKARRLT-SLPAEELGATISPDGQSVAYVA-NYEGSSEVYVIAIDGGQA-K 107

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINI-SAS 308
           R+    S +    ++ +GK  L +         Y V L++     L  T+    +     
Sbjct: 108 RVSFENSRVRVQGWTRDGK-ILYATDNAFGPANYWV-LRTVDPANLVTTDLPLADAIEGV 165

Query: 309 YSPDSSQIVFES------------DREG-KEQLYVMQS-NGSDQKRISQDKEASYFDPV- 353
               +  + F               R G K +L+  +  +  + ++++     S   P+ 
Sbjct: 166 IDEQNEYVYFTRFGLQTTGDNAKVYRGGAKGELWRFKLGDKQEAQQLAATHNGSVRQPML 225

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           W      + F   S     I  M  DG   +        Q  +   +   ++F       
Sbjct: 226 WQ---SRVYFISDSDGNDNIWSMSVDGKDLQQHTHYKEWQVRSAKLNEGRIVF------Q 276

Query: 414 TGSKLYSIDLNGRNETLIN 432
            G+ +   D+    E +++
Sbjct: 277 QGADIKLFDIASNKEQVVD 295


>gi|237719462|ref|ZP_04549943.1| prolyl oligopeptidase [Bacteroides sp. 2_2_4]
 gi|229451322|gb|EEO57113.1| prolyl oligopeptidase [Bacteroides sp. 2_2_4]
          Length = 700

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 53/322 (16%), Positives = 111/322 (34%), Gaps = 64/322 (19%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           +++ F+S    +    + L  M+ DG+  + LT     I      SP+ +K+ + +    
Sbjct: 115 TKLAFLS----NDNGSSQLYEMNPDGSGRKQLTNYDGDIEGY-SISPDGKKLLFISQVKT 169

Query: 232 ---------DDEDILRVYLMDTRIDRAPKRIG--------NFRSMILA------------ 262
                    D      + + D       + +         +F    ++            
Sbjct: 170 KESTADKYPDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVDILNDEPYE 229

Query: 263 ----P-------RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLF 302
               P        +++   +   + +K            DIY  DL +  TE +T     
Sbjct: 230 SPMKPWGGIEQLAWNTTSDKVAYTCRKKTGLEYAISTNSDIYVYDLNTKKTENITEENKG 289

Query: 303 INISASYSPDSSQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + +  YSPD   I ++S +R+G      +L++M     +++ +S+  E++    VW   
Sbjct: 290 YDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFVWGAD 349

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             +I FT     +  I  +       + +           +  G  LI +++     G +
Sbjct: 350 AKVIYFTGVWHGESQIYALDLANDSVKAITSGMYDYEGV-ALFGDKLI-AKRHSMSMGDE 407

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           +YS+ L+G    L        D
Sbjct: 408 IYSVALDGSTTQLTQENKQIYD 429



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 94/280 (33%), Gaps = 67/280 (23%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISV------QKD 279
           T D     +V +  + I    KR+          I     S +GK+   +V      +  
Sbjct: 21  TKDAGKTDQVLIEKSDIKIEGKRMTPEALWAMGRIGGFAVSPDGKKIAYTVAYYSVPENK 80

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +++ ++   +  +++T T +     ++    +++ F S+  G  QLY M  +GS +K
Sbjct: 81  SNREVFVMNADGSENQQITRTPYQENEVTWIKGGTKLAFLSNDNGSSQLYEMNPDGSGRK 140

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK----------------------------- 370
           +++ + +        SP G  + F      K                             
Sbjct: 141 QLT-NYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTDLMYKHWDEW 199

Query: 371 ----FAIGVMKKDGSQERLLVEDSNLQAPTWSPS--------------GRSLIFS-RKKD 411
                   V   DG+    +V+  N + P  SP                  + ++ RKK 
Sbjct: 200 VTTAPHPFVADFDGNGISNIVDILNDE-PYESPMKPWGGIEQLAWNTTSDKVAYTCRKKT 258

Query: 412 G-----DTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           G      T S +Y  DLN +    I      Y ++PQ+  
Sbjct: 259 GLEYAISTNSDIYVYDLNTKKTENITEENKGYDTNPQYSP 298



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 51/321 (15%), Positives = 109/321 (33%), Gaps = 69/321 (21%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG+  + +T +  Q      +     K+A+ + D+       +
Sbjct: 74  YSVPENKSNREVFVMNADGSENQQITRTPYQENEV-TWIKGGTKLAFLSNDNGSSQLYEM 132

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------------- 278
                 R  K++ N+   I     S +GK+ L   Q                        
Sbjct: 133 NPDGSGR--KQLTNYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTD 190

Query: 279 ----------DEAMDIYSVDLQSNATERLTNTLFINISA--------------SYSPDSS 314
                       A   +  D   N    + + L  N                 +++  S 
Sbjct: 191 LMYKHWDEWVTTAPHPFVADFDGNGISNIVDIL--NDEPYESPMKPWGGIEQLAWNTTSD 248

Query: 315 QIVFE-SDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++ +    + G          +YV   N    + I+++ +    +P +SP G  IA+   
Sbjct: 249 KVAYTCRKKTGLEYAISTNSDIYVYDLNTKKTENITEENKGYDTNPQYSPDGKYIAWQSM 308

Query: 367 SGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             + +      + +M  +  ++R + +  +SN+ A  W    + + F+    G+  S++Y
Sbjct: 309 ERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFVWGADAKVIYFTGVWHGE--SQIY 366

Query: 420 SIDLNGRNETLINTPAYASDP 440
           ++DL   +   I +  Y  + 
Sbjct: 367 ALDLANDSVKAITSGMYDYEG 387



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 84/276 (30%), Gaps = 61/276 (22%)

Query: 218 RFSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+ +K+AY     +  +    R   +        ++I           +   G +  
Sbjct: 59  AVSPDGKKIAYTVAYYSVPENKSNREVFVMNADGSENQQITRTPYQENEVTWIKGGTKLA 118

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-------- 325
                + +  +Y ++   +  ++LTN        S SPD  +++F S  + K        
Sbjct: 119 FLSNDNGSSQLYEMNPDGSGRKQLTNYDGDIEGYSISPDGKKLLFISQVKTKESTADKYP 178

Query: 326 -------------------------EQLYVMQSNGSDQKRISQ-----------DKEASY 349
                                       +V   +G+    I                   
Sbjct: 179 DLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVDILNDEPYESPMKPWGGI 238

Query: 350 FDPVWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSP 399
               W+   D +A+T                I V   +  +   + E+       P +SP
Sbjct: 239 EQLAWNTTSDKVAYTCRKKTGLEYAISTNSDIYVYDLNTKKTENITEENKGYDTNPQYSP 298

Query: 400 SGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLIN 432
            G+ + + S ++DG     ++L+ ++L    +  ++
Sbjct: 299 DGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVS 334


>gi|297159801|gb|ADI09513.1| putative WD-40 repeat protein [Streptomyces bingchenggensis BCW-1]
          Length = 849

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 83/259 (32%), Gaps = 15/259 (5%)

Query: 164 QSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           + +TG  G   S           +G     + + D      R     R   +    FSP+
Sbjct: 570 RRLTGHSGFAGSVAFSPDGRTLATGGGDGKIRLWDAATGERRATLSGRTDAVVSMTFSPD 629

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A  + D        L D    R    +      + +   S +G+    +   D   
Sbjct: 630 GRTLATGSNDTAR-----LWDVTTGRPRTTLTGHTKGVGSVASSPDGRTLA-TGGWDGKS 683

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++ V           +T  +  S ++SPD   +   S   G + + +        + I 
Sbjct: 684 QLWDVATSKRRATLSGHTKGVE-SVAFSPDGRTLATGS---GDKTVRLWDMATGRPRTIL 739

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
             +  + +   +SP G  +A T     K  +  +     +  L      + +  +SP G 
Sbjct: 740 SGRTDAVWAVAFSPDGRTLA-TGGRDGKARLWDVTTGRPRTTLTGHTGGVGSVAFSPDGH 798

Query: 403 SLIFSRKKDGDTGSKLYSI 421
           +L        D   +L+ +
Sbjct: 799 TLATGSN---DKAVRLWDV 814



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 49/330 (14%), Positives = 98/330 (29%), Gaps = 28/330 (8%)

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKI--AHTISDDIYQSITGEKGDFNS-----RI 177
            V   L        I  +++ +S     +   A  I+    Q      G  +S      +
Sbjct: 484 TVSVLLVLALTAGLIAWQQYRTSEQQRHQALTAQQIA-LSRQLAAQSAGLLDSNPDLASL 542

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           L V     S   + +  +       ++              FSP+ + +A          
Sbjct: 543 LAVQAYRTSPTREATASLFTAAALPLKRRLTGHSGFAGSVAFSPDGRTLA----TGGGDG 598

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-R 296
           ++ L D         +      +++  FS +G+           +     D+ +      
Sbjct: 599 KIRLWDAATGERRATLSGRTDAVVSMTFSPDGRTLATGSNDTARLW----DVTTGRPRTT 654

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT       S + SPD   +      +GK QL+      S ++              +SP
Sbjct: 655 LTGHTKGVGSVASSPDGRTLA-TGGWDGKSQLW--DVATSKRRATLSGHTKGVESVAFSP 711

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDT 414
            G  +A          + +      + R ++        A  +SP GR+L  +  +DG  
Sbjct: 712 DGRTLA---TGSGDKTVRLWDMATGRPRTILSGRTDAVWAVAFSPDGRTLA-TGGRDGK- 766

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            ++L+ +       TL           +  
Sbjct: 767 -ARLWDVTTGRPRTTLTGHTGGVGSVAFSP 795



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 58/188 (30%), Gaps = 34/188 (18%)

Query: 113 TGRVIKEGKDRLRVEF------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            G V      R           +LWDV   K+                 HT         
Sbjct: 662 VGSVASSPDGRTLATGGWDGKSQLWDVATSKRRATLS-----------GHT--------- 701

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
              KG  +        ++ +G    ++ + D      R +   R   ++   FSP+ + +
Sbjct: 702 ---KGVESVAFSPDGRTLATGSGDKTVRLWDMATGRPRTILSGRTDAVWAVAFSPDGRTL 758

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A    D +      L D    R    +      + +  FS +G     +   D+A+ ++ 
Sbjct: 759 ATGGRDGK----ARLWDVTTGRPRTTLTGHTGGVGSVAFSPDGHTLA-TGSNDKAVRLWD 813

Query: 287 VDLQSNAT 294
           V + + + 
Sbjct: 814 VQMAARSP 821


>gi|293370213|ref|ZP_06616773.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           ovatus SD CMC 3f]
 gi|292634710|gb|EFF53239.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           ovatus SD CMC 3f]
          Length = 693

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 53/322 (16%), Positives = 111/322 (34%), Gaps = 64/322 (19%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           +++ F+S    +    + L  M+ DG+  + LT     I      SP+ +K+ + +    
Sbjct: 108 TKLAFLS----NDNGSSQLYEMNPDGSGRKQLTNYDGDIEGY-SISPDGKKLLFISQVKT 162

Query: 232 ---------DDEDILRVYLMDTRIDRAPKRIG--------NFRSMILA------------ 262
                    D      + + D       + +         +F    ++            
Sbjct: 163 KESTADKYPDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVDILNDEPYE 222

Query: 263 ----P-------RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLF 302
               P        +++   +   + +K            DIY  DL +  TE +T     
Sbjct: 223 SPMKPWGGIEQLAWNTTSDKVAYTCRKKTGLEYAISTNSDIYVYDLNTKKTENITEENKG 282

Query: 303 INISASYSPDSSQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + +  YSPD   I ++S +R+G      +L++M     +++ +S+  E++    VW   
Sbjct: 283 YDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFVWGAD 342

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             +I FT     +  I  +       + +           +  G  LI +++     G +
Sbjct: 343 AKVIYFTGVWHGESQIYALDLANDSVKAITSGMYDYEGV-ALFGDKLI-AKRHSMSMGDE 400

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           +YS+ L+G    L        D
Sbjct: 401 IYSVALDGSTTQLTQENKQIYD 422



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 94/280 (33%), Gaps = 67/280 (23%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISV------QKD 279
           T D     +V +  + I    KR+          I     S +GK+   +V      +  
Sbjct: 14  TKDAGKTDQVLIEKSDIKIEGKRMTPEALWAMGRIGGFAVSPDGKKIAYTVAYYSVPENK 73

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +++ ++   +  +++T T +     ++    +++ F S+  G  QLY M  +GS +K
Sbjct: 74  SNREVFVMNADGSENQQITRTPYQENEVTWIKGGTKLAFLSNDNGSSQLYEMNPDGSGRK 133

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK----------------------------- 370
           +++ + +        SP G  + F      K                             
Sbjct: 134 QLT-NYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTDLMYKHWDEW 192

Query: 371 ----FAIGVMKKDGSQERLLVEDSNLQAPTWSPS--------------GRSLIFS-RKKD 411
                   V   DG+    +V+  N + P  SP                  + ++ RKK 
Sbjct: 193 VTTAPHPFVADFDGNGISNIVDILNDE-PYESPMKPWGGIEQLAWNTTSDKVAYTCRKKT 251

Query: 412 G-----DTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           G      T S +Y  DLN +    I      Y ++PQ+  
Sbjct: 252 GLEYAISTNSDIYVYDLNTKKTENITEENKGYDTNPQYSP 291



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 51/321 (15%), Positives = 109/321 (33%), Gaps = 69/321 (21%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG+  + +T +  Q      +     K+A+ + D+       +
Sbjct: 67  YSVPENKSNREVFVMNADGSENQQITRTPYQENEV-TWIKGGTKLAFLSNDNGSSQLYEM 125

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------------- 278
                 R  K++ N+   I     S +GK+ L   Q                        
Sbjct: 126 NPDGSGR--KQLTNYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTD 183

Query: 279 ----------DEAMDIYSVDLQSNATERLTNTLFINISA--------------SYSPDSS 314
                       A   +  D   N    + + L  N                 +++  S 
Sbjct: 184 LMYKHWDEWVTTAPHPFVADFDGNGISNIVDIL--NDEPYESPMKPWGGIEQLAWNTTSD 241

Query: 315 QIVFE-SDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++ +    + G          +YV   N    + I+++ +    +P +SP G  IA+   
Sbjct: 242 KVAYTCRKKTGLEYAISTNSDIYVYDLNTKKTENITEENKGYDTNPQYSPDGKYIAWQSM 301

Query: 367 SGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             + +      + +M  +  ++R + +  +SN+ A  W    + + F+    G+  S++Y
Sbjct: 302 ERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFVWGADAKVIYFTGVWHGE--SQIY 359

Query: 420 SIDLNGRNETLINTPAYASDP 440
           ++DL   +   I +  Y  + 
Sbjct: 360 ALDLANDSVKAITSGMYDYEG 380



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 84/276 (30%), Gaps = 61/276 (22%)

Query: 218 RFSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+ +K+AY     +  +    R   +        ++I           +   G +  
Sbjct: 52  AVSPDGKKIAYTVAYYSVPENKSNREVFVMNADGSENQQITRTPYQENEVTWIKGGTKLA 111

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-------- 325
                + +  +Y ++   +  ++LTN        S SPD  +++F S  + K        
Sbjct: 112 FLSNDNGSSQLYEMNPDGSGRKQLTNYDGDIEGYSISPDGKKLLFISQVKTKESTADKYP 171

Query: 326 -------------------------EQLYVMQSNGSDQKRISQ-----------DKEASY 349
                                       +V   +G+    I                   
Sbjct: 172 DLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVDILNDEPYESPMKPWGGI 231

Query: 350 FDPVWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSP 399
               W+   D +A+T                I V   +  +   + E+       P +SP
Sbjct: 232 EQLAWNTTSDKVAYTCRKKTGLEYAISTNSDIYVYDLNTKKTENITEENKGYDTNPQYSP 291

Query: 400 SGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLIN 432
            G+ + + S ++DG     ++L+ ++L    +  ++
Sbjct: 292 DGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVS 327


>gi|37519745|ref|NP_923122.1| hypothetical protein glr0176 [Gloeobacter violaceus PCC 7421]
 gi|35210736|dbj|BAC88117.1| glr0176 [Gloeobacter violaceus PCC 7421]
          Length = 644

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 72/190 (37%), Gaps = 12/190 (6%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G   +          ++          ++T    +NI A++SP    I +  DR
Sbjct: 59  PSLSPDGGELVYRTGVSGQPQLWVNGPDG--PRQITFGESVNI-AAWSPAGDGIAYSVDR 115

Query: 323 EG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKK 378
            G  +E  Y +  +G  ++ +    ++      +S  G  +A+      K  F + V+  
Sbjct: 116 GGDEREGYYFISPDGKRERELVAPADSFRVWGGFSRDGSQVAYAATEPGKADFNVYVLTV 175

Query: 379 DGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              Q R ++       P  W P G++L+ SR +  D    LY +DL     + +  P  A
Sbjct: 176 ATGQTRRVLSGQAGIYPVAWRPDGKALVLSRVRGEDANDLLY-LDLTTGQASDLLAPPEA 234

Query: 438 S---DPQWVG 444
           S      W  
Sbjct: 235 SAYTQIAWTP 244



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 97/265 (36%), Gaps = 14/265 (5%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR- 238
           V  + VSG     L V   DG   R +T      +    +SP    +AY+     D    
Sbjct: 69  VYRTGVSGQP--QLWVNGPDG--PRQITFGESVNIA--AWSPAGDGIAYSVDRGGDEREG 122

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD--IYSVDLQSNATER 296
            Y +     R  + +    S  +   FS +G +   +  +    D  +Y + + +  T R
Sbjct: 123 YYFISPDGKRERELVAPADSFRVWGGFSRDGSQVAYAATEPGKADFNVYVLTVATGQTRR 182

Query: 297 LTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           + +        ++ PD   +V    R  +  + LY+  + G     ++  + ++Y    W
Sbjct: 183 VLSGQAGIYPVAWRPDGKALVLSRVRGEDANDLLYLDLTTGQASDLLAPPEASAYTQIAW 242

Query: 355 SPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDG 412
           +P G     +      FA +        + R +     +++A   S  GR L +S    G
Sbjct: 243 TPDGKGFYLSTNQDRDFAALAYYDFAARKLRTVETPAHDVEAVALSGDGRYLAWSENVGG 302

Query: 413 DTGSKLYSIDLNGRNETLINTPAYA 437
            + ++L  +  N R   ++  P   
Sbjct: 303 FSEARLRDLRTN-RTVPILGLPKGV 326



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/278 (16%), Positives = 96/278 (34%), Gaps = 18/278 (6%)

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
             L A+  V   +  +G     + +R   V  + Q+    + + P   R+I  T  + + 
Sbjct: 49  RYLNARAAVNPSLSPDGG---ELVYRT-GVSGQPQL----WVNGPDGPRQI--TFGESVN 98

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            +     GD    I +  +    G  +     +  DG   R L    D       FS + 
Sbjct: 99  IAAWSPAGDG---IAYSVDRG--GDEREGYYFISPDGKRERELVAPADSFRVWGGFSRDG 153

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAM 282
            +VAYA  +         + T      +R+ + ++ I    +  +GK  ++S V+ ++A 
Sbjct: 154 SQVAYAATEPGKADFNVYVLTVATGQTRRVLSGQAGIYPVAWRPDGKALVLSRVRGEDAN 213

Query: 283 DIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           D+  +DL +     L            +++PD       ++++            + + R
Sbjct: 214 DLLYLDLTTGQASDLLAPPEASAYTQIAWTPDGKGFYLSTNQDRDFAALAYYDFAARKLR 273

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             +           S  G  +A+++  G      +   
Sbjct: 274 TVETPAHDVEAVALSGDGRYLAWSENVGGFSEARLRDL 311



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 3/95 (3%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           +P  SP G  + +      +  + V   DG   R +    ++    WSP+G  + +S  +
Sbjct: 58  NPSLSPDGGELVYRTGVSGQPQLWVNGPDG--PRQITFGESVNIAAWSPAGDGIAYSVDR 115

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
            GD     Y I  +G+ E  +  PA +    W GF
Sbjct: 116 GGDEREGYYFISPDGKRERELVAPADSFR-VWGGF 149


>gi|162450958|ref|YP_001613325.1| WD repeat-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161161540|emb|CAN92845.1| Hypothetical WD-repeat protein [Sorangium cellulosum 'So ce 56']
          Length = 2305

 Score = 93.5 bits (231), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 75/241 (31%), Gaps = 17/241 (7%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            L       +    +SP+ Q++A A YD      V L          R       +LA  +
Sbjct: 1259 LVSGHTGTINALAWSPDGQRLATAGYDH----TVRLWHADTGAELARFEGHSDWVLAVAW 1314

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
              +G+R   S   D  + I+          RL        + ++ PD   +   SD    
Sbjct: 1315 RPDGQRLA-SAGYDLTVRIWHA-GTGKERARLEGHADWVRAVAWHPDGEHLASGSD---D 1369

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-- 383
            + + +  ++   +    +          W P G  +A    +G+   + +      +E  
Sbjct: 1370 QTVRIWDASTGRELAQIEGHARGVRAVAWHPDGRRLA---TAGDGNTVRIWDTGTGKEIA 1426

Query: 384  RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            RL      + A  W P GR L            +++ I   G    L    +      W 
Sbjct: 1427 RLESHVRGVSAVAWHPDGRRLA---TAGDGNTVRIWDIGTGGEIARLERRSSGVRVVAWR 1483

Query: 444  G 444
             
Sbjct: 1484 P 1484



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 48/373 (12%), Positives = 107/373 (28%), Gaps = 55/373 (14%)

Query: 75   RSDVFNLISQDSFKQKITNPDSIPRFQDW-NSLGAQV---------LVTGRVIKEG---- 120
             +   N ++     Q++         + W    GA++         ++      +G    
Sbjct: 1263 HTGTINALAWSPDGQRLATAGYDHTVRLWHADTGAELARFEGHSDWVLAVAWRPDGQRLA 1322

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                 +  R+W     K+             R   H  +D +        G+        
Sbjct: 1323 SAGYDLTVRIWHAGTGKE-----------RARLEGH--ADWVRAVAWHPDGEHL------ 1363

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 SG    ++ + D              + +    + P+ +++A       D   V 
Sbjct: 1364 ----ASGSDDQTVRIWDASTGRELAQIEGHARGVRAVAWHPDGRRLA----TAGDGNTVR 1415

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + DT   +   R+ +    + A  +  +G+R       D                RL   
Sbjct: 1416 IWDTGTGKEIARLESHVRGVSAVAWHPDGRRLA--TAGDGNTVRIWDIGTGGEIARLERR 1473

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   ++ PD  ++    D      + +  ++   +    +          W P    
Sbjct: 1474 SSGVRVVAWRPDGRRLATAGD---GNTVRIWDASTGSELPRLEGHTNWVRAMAWHPDNRR 1530

Query: 361  IAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A    +G+   + +      +E  RL    + + A  W PSG  L        D+  ++
Sbjct: 1531 LA---SAGDGNTVRIWDTGTGKELTRLEGHSNWVLALAWHPSGDRLA---SAGNDSMVRI 1584

Query: 419  YSIDLNGRNETLI 431
            +     G+  T +
Sbjct: 1585 WDTR-TGKELTRL 1596



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/353 (14%), Positives = 110/353 (31%), Gaps = 43/353 (12%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS---PASWRKIAHTISDDIYQSITGEKG 171
            R+   G        R+WD+    +I   +  SS     +WR     ++       T    
Sbjct: 1446 RLATAGDGN---TVRIWDIGTGGEIARLERRSSGVRVVAWRPDGRRLA-TAGDGNTVRIW 1501

Query: 172  DFNSRILFVSESVVSGIIK-----------------NSLCVMDRDGANIRYLTPSRDQIL 214
            D ++          +  ++                 N++ + D                +
Sbjct: 1502 DASTGSELPRLEGHTNWVRAMAWHPDNRRLASAGDGNTVRIWDTGTGKELTRLEGHSNWV 1561

Query: 215  FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
                + P+  ++A       +   V + DTR  +   R+    + +LA  +  +G R   
Sbjct: 1562 LALAWHPSGDRLA----SAGNDSMVRIWDTRTGKELTRLEGHSNWVLALAWHPDGNRLA- 1616

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            S   D+ + I+    Q     RL   L   ++ ++ P  +++       G +    +   
Sbjct: 1617 SAGDDQTVRIWDA-GQGEELARLEGHLNGVLALAFHPLGNRLA----SAGHDGAVRIWET 1671

Query: 335  GSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSN 391
             + Q+    +  + +     W P G  +A    +G    + +   D  ++  RL     +
Sbjct: 1672 TTGQELARFEGHSDWILALAWHPDGGRLA---SAGHDTTVRIWDPDTGKQLARLQGHTRD 1728

Query: 392  LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            ++A  W   G  L        DT  +++          L       +   W  
Sbjct: 1729 VKALAWRQDGERLA---SAGDDTTVRIWDAGTGEEVARLEGHTLGITAVAWSP 1778



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/352 (15%), Positives = 107/352 (30%), Gaps = 49/352 (13%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQII---GKKFFSSPASWRKIAHTISDD---------- 161
            R+   G        R+WD    K++    G   +    +W      ++            
Sbjct: 1530 RLASAGDGN---TVRIWDTGTGKELTRLEGHSNWVLALAWHPSGDRLASAGNDSMVRIWD 1586

Query: 162  --IYQSITGEKGDFNSRILFV----SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
                + +T  +G  N  +          + S     ++ + D                + 
Sbjct: 1587 TRTGKELTRLEGHSNWVLALAWHPDGNRLASAGDDQTVRIWDAGQGEELARLEGHLNGVL 1646

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               F P   ++A A +D      V + +T   +   R       ILA  +  +G R   S
Sbjct: 1647 ALAFHPLGNRLASAGHDG----AVRIWETTTGQELARFEGHSDWILALAWHPDGGRLA-S 1701

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSN 334
               D  + I+  D       RL      ++ A ++  D  ++    D      + +  + 
Sbjct: 1702 AGHDTTVRIWDPD-TGKQLARL-QGHTRDVKALAWRQDGERLASAGD---DTTVRIWDAG 1756

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNL 392
              ++    +          WSP+G+ +A     G    + +      +E  R+      +
Sbjct: 1757 TGEEVARLEGHTLGITAVAWSPRGERLASAGHDGT---VRIWDAATGEEIDRIEGHTRRV 1813

Query: 393  QAPTWSPSGRSLIFSRKKDGDTGSKLYSID--------LNGRNETLINTPAY 436
             A  W P G  L        D   +++S D        ++    TL  TP  
Sbjct: 1814 MAMAWQPRGDRLA---SAGHDGTVRIWSADQRRLLASFVSAGRTTLARTPGG 1862


>gi|171677548|ref|XP_001903725.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936842|emb|CAP61500.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1518

 Score = 93.5 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 94/289 (32%), Gaps = 44/289 (15%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG    ++ + D    +           +    FSP+ + VA  + D      + + D
Sbjct: 846  VASGSRDKTIKIWDAATGSCTQTLAGHRNWVKSVAFSPDSKWVASGSDDS----TIKIWD 901

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
                   + +      + +  FS + K    S   D  + I+  D  + +  + L     
Sbjct: 902  AATGSYTQTLEGHGGSVNSVAFSPDSKWVA-SGSSDSTIKIW--DAATGSYTQTLEGHSG 958

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGS------DQKRI------------SQD 344
               S ++SPDS  +   S   G + + +  +         +  R+            +  
Sbjct: 959  SVNSVAFSPDSKWVASGS---GDDTIKIWDAATGLCTQTLEGHRLFGNVGSVLARFETLA 1015

Query: 345  KEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSG 401
               ++     +SP    +A          I +           +E    ++ +  +SP  
Sbjct: 1016 GHRNWVKSVAFSPDSKWVASGSDDST---IKIWDAATGSYTQTLEGHGGSVNSVAFSPDS 1072

Query: 402  RSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
            + +        D+  K++        +TL      +N+ A++ D +WV 
Sbjct: 1073 KWVA---SGSSDSTIKIWDAATGSYTQTLEGHGGSVNSVAFSPDSKWVA 1118



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 88/287 (30%), Gaps = 21/287 (7%)

Query: 163  YQSITGEKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            Y       G   + + F  +S  V SG   +++ + D    +           +    FS
Sbjct: 1052 YTQTLEGHGGSVNSVAFSPDSKWVASGSSDSTIKIWDAATGSYTQTLEGHGGSVNSVAFS 1111

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+ + VA  + D      + + D       + +      + +  FS + K    S   D+
Sbjct: 1112 PDSKWVASGSSDS----TIKIWDAATGSYTQTLEGHSGSVNSVAFSPDSKWVA-SGSGDD 1166

Query: 281  AMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             + I+  D  +    + L    +  +S ++SPDS  +   S     + + +  +      
Sbjct: 1167 TIKIW--DAATGLCTQTLEGHRYSVMSVAFSPDSKWVASGSY---DKTIKIWDAATGSCT 1221

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTW 397
            +             +SP    +A          I + +         +      + +  +
Sbjct: 1222 QTLAGHRNWVKSVAFSPDSKWVA---SGSGDKTIKIREAATGLCTQTIAGHGLSVHSVAF 1278

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            SP  + +       GD   K++        +TL           +  
Sbjct: 1279 SPDSKWVA---SGSGDKTIKIWDAATGSCTQTLAGHGDSVMSVAFSP 1322



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 84/270 (31%), Gaps = 44/270 (16%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             R         +    FSP+ + VA  + D      + + D       + +   R+ + +
Sbjct: 823  CRQTLEGHRHPVDSVAFSPDSKWVASGSRDK----TIKIWDAATGSCTQTLAGHRNWVKS 878

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
              FS + K    S   D  + I+  D  + +  + L        S ++SPDS  +   S 
Sbjct: 879  VAFSPDSKWVA-SGSDDSTIKIW--DAATGSYTQTLEGHGGSVNSVAFSPDSKWVASGSS 935

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                  + +  +      +  +    S     +SP    +A          I +      
Sbjct: 936  ---DSTIKIWDAATGSYTQTLEGHSGSVNSVAFSPDSKWVASGSGDDT---IKIWDAATG 989

Query: 382  QERLLVEDSN---------------------LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                 +E                        +++  +SP  + +        D+  K++ 
Sbjct: 990  LCTQTLEGHRLFGNVGSVLARFETLAGHRNWVKSVAFSPDSKWVASGSD---DSTIKIWD 1046

Query: 421  IDLNGRNETL------INTPAYASDPQWVG 444
                   +TL      +N+ A++ D +WV 
Sbjct: 1047 AATGSYTQTLEGHGGSVNSVAFSPDSKWVA 1076



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 71/225 (31%), Gaps = 16/225 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG    ++ + D    +           +    FSP+ + VA  + D      + + +
Sbjct: 1201 VASGSYDKTIKIWDAATGSCTQTLAGHRNWVKSVAFSPDSKWVASGSGDK----TIKIRE 1256

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
                   + I      + +  FS + K    S   D+ + I+  D  + +  + L     
Sbjct: 1257 AATGLCTQTIAGHGLSVHSVAFSPDSKWVA-SGSGDKTIKIW--DAATGSCTQTLAGHGD 1313

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              +S ++SPDS  +   S+    + + +  +      +  +          +SP    IA
Sbjct: 1314 SVMSVAFSPDSKGVTSGSN---DKTIKIWDAATGSCTQTLKGHRDFVLSVAFSPDSKWIA 1370

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
                      I +            +       +  +SP  + + 
Sbjct: 1371 SGSRDKT---IKIWDAATGSCTQTFKGHRHWIMSVAFSPDSKWVA 1412



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 72/207 (34%), Gaps = 17/207 (8%)

Query: 219 FSPNQQ--KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           FSP +   +  +   + + I    +++   +   + +   R  + +  FS + K    S 
Sbjct: 791 FSPARSITRGLFREKERKWIALGPIVENNWNACRQTLEGHRHPVDSVAFSPDSKWVA-SG 849

Query: 277 QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +D+ + I+  D  + +  + L        S ++SPDS  +   SD      + +  +  
Sbjct: 850 SRDKTIKIW--DAATGSCTQTLAGHRNWVKSVAFSPDSKWVASGSD---DSTIKIWDAAT 904

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQ 393
               +  +    S     +SP    +A          I +           +E    ++ 
Sbjct: 905 GSYTQTLEGHGGSVNSVAFSPDSKWVASGSSDST---IKIWDAATGSYTQTLEGHSGSVN 961

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +  +SP  + +       GD   K++ 
Sbjct: 962 SVAFSPDSKWVA---SGSGDDTIKIWD 985



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 68/185 (36%), Gaps = 12/185 (6%)

Query: 170  KGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             GD    + F  +S  V SG    ++ + D    +           +    FSP+ + +A
Sbjct: 1311 HGDSVMSVAFSPDSKGVTSGSNDKTIKIWDAATGSCTQTLKGHRDFVLSVAFSPDSKWIA 1370

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D      + + D       +     R  I++  FS + K    S  +D+ + I+  
Sbjct: 1371 SGSRDK----TIKIWDAATGSCTQTFKGHRHWIMSVAFSPDSKWVA-SGSRDKTIKIWEA 1425

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                + T+ L        S + S +S+ I   SD +     Y + S+    + I++  E 
Sbjct: 1426 -ATGSCTQTLKGHRDSVQSVASSINSTLIASGSD-DANPPCYGINSDN---RWITRGLEN 1480

Query: 348  SYFDP 352
              + P
Sbjct: 1481 WLWLP 1485


>gi|189466155|ref|ZP_03014940.1| hypothetical protein BACINT_02525 [Bacteroides intestinalis DSM
           17393]
 gi|189434419|gb|EDV03404.1| hypothetical protein BACINT_02525 [Bacteroides intestinalis DSM
           17393]
          Length = 702

 Score = 93.5 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 94/277 (33%), Gaps = 63/277 (22%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+++++AY        +++    V++M+T      ++I           +   G + 
Sbjct: 59  AVSPDEKQIAYTVAYYSVPENKSNREVFVMNTDGTGN-QQITRTPWQENEVNWIKGGTKL 117

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--------- 323
                +  +  ++ ++   +  ++LT         S+SPD  +++F +  +         
Sbjct: 118 AFLSNEGGSSQLWEMNPDGSGRKQLTQYDGDIEGYSFSPDGKKLLFIAQVKTKQSTADKY 177

Query: 324 ------------------------GKEQLYVMQSNGSDQKRISQDKEASYFDP------- 352
                                   G    +V   +G+    I    E   ++        
Sbjct: 178 PDLPKATGIIVTDLMYKHWDEWVIGAPHPFVADFDGNSISNIKDILEGEPYESPMRPWGG 237

Query: 353 ----VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWS 398
                WSP GD +A+T                I +      +   + E+       P +S
Sbjct: 238 IEQLAWSPAGDKVAYTCRKKTGLAYAISTNSDIYIYDLATKKTDNITEENKGYDTNPQYS 297

Query: 399 PSGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLIN 432
           P G+ + + S ++DG     ++L+ ++L    +  ++
Sbjct: 298 PDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVS 334



 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 85/247 (34%), Gaps = 61/247 (24%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S + K+   +V      +     +++ ++      +++T T +     ++  
Sbjct: 53  GRISGVAVSPDEKQIAYTVAYYSVPENKSNREVFVMNTDGTGNQQITRTPWQENEVNWIK 112

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--- 368
             +++ F S+  G  QL+ M  +GS +K+++Q  +       +SP G  + F        
Sbjct: 113 GGTKLAFLSNEGGSSQLWEMNPDGSGRKQLTQY-DGDIEGYSFSPDGKKLLFIAQVKTKQ 171

Query: 369 ------------------------------EKFAIGVMKKDG---SQERLLVEDSNLQAP 395
                                               V   DG   S  + ++E    ++P
Sbjct: 172 STADKYPDLPKATGIIVTDLMYKHWDEWVIGAPHPFVADFDGNSISNIKDILEGEPYESP 231

Query: 396 ----------TWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLIN--TPAYA 437
                      WSP+G  + ++ RKK G      T S +Y  DL  +    I      Y 
Sbjct: 232 MRPWGGIEQLAWSPAGDKVAYTCRKKTGLAYAISTNSDIYIYDLATKKTDNITEENKGYD 291

Query: 438 SDPQWVG 444
           ++PQ+  
Sbjct: 292 TNPQYSP 298



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 102/302 (33%), Gaps = 65/302 (21%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG   + +T +  Q      +     K+A+ + ++    +++ 
Sbjct: 74  YSVPENKSNREVFVMNTDGTGNQQITRTPWQENEV-NWIKGGTKLAFLS-NEGGSSQLWE 131

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---------------------- 279
           M+       K++  +   I    FS +GK+ L   Q                        
Sbjct: 132 MNPD-GSGRKQLTQYDGDIEGYSFSPDGKKLLFIAQVKTKQSTADKYPDLPKATGIIVTD 190

Query: 280 -----------EAMDIYSVDLQSNATERL------------TNTLFINISASYSPDSSQI 316
                       A   +  D   N+   +                      ++SP   ++
Sbjct: 191 LMYKHWDEWVIGAPHPFVADFDGNSISNIKDILEGEPYESPMRPWGGIEQLAWSPAGDKV 250

Query: 317 VFE-SDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +    + G          +Y+          I+++ +    +P +SP G  IA+     
Sbjct: 251 AYTCRKKTGLAYAISTNSDIYIYDLATKKTDNITEENKGYDTNPQYSPDGKYIAWQSMER 310

Query: 369 EKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +      + +M  +  ++R + +  +SN+    W+   +S+ F     G+T  ++Y++
Sbjct: 311 DGYEADLNRLFIMNLETGEKRFVSKEFESNVDGFLWNKDSKSIYFIGVWHGET--QIYNV 368

Query: 422 DL 423
           DL
Sbjct: 369 DL 370



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 73/213 (34%), Gaps = 25/213 (11%)

Query: 194 CVMDRDG---ANIRYLTPSRD-QILFEP-------RFSPNQQKVAYA-------TYDDED 235
            V D DG   +NI+ +      +    P        +SP   KVAY         Y    
Sbjct: 207 FVADFDGNSISNIKDILEGEPYESPMRPWGGIEQLAWSPAGDKVAYTCRKKTGLAYAIST 266

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEA----MDIYSVDLQ 290
              +Y+ D    +        +     P++S +GK     S+++D        ++ ++L+
Sbjct: 267 NSDIYIYDLATKKTDNITEENKGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLE 326

Query: 291 SNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +     ++     N+    ++ DS  I F     G+ Q+Y +    +D+     D    Y
Sbjct: 327 TGEKRFVSKEFESNVDGFLWNKDSKSIYFIGVWHGETQIYNVDLAANDKVTQLTDGMYDY 386

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               ++    +IA          I  +    + 
Sbjct: 387 ASLAFAGD-KVIALRHSMSMGDEIYAVSATRNG 418



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 91/244 (37%), Gaps = 20/244 (8%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMD 243
              + + + D        +T         P++SP+ + +A+ + + +    D+ R+++M+
Sbjct: 265 STNSDIYIYDLATKKTDNITEENKGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMN 324

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLF 302
                       F S +    ++ + K             IY+VDL +N    +LT+ ++
Sbjct: 325 LETGEKRFVSKEFESNVDGFLWNKDSKSIYFIGVWHGETQIYNVDLAANDKVTQLTDGMY 384

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S +++ D   I         +++Y + +        +++ +A       + +   I 
Sbjct: 385 DYASLAFAGD-KVIALRHSMSMGDEIYAVSA--------TRNGDAFAEVKQLTFENKQI- 434

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYS 420
           + +    K     MK    ++ L      +  P ++P+ +   L+F         S+ +S
Sbjct: 435 YDQLEMGKVEARWMKTTDGKQML---TWVIYPPQFNPNKKYPTLLFCEGGPQSPVSQFWS 491

Query: 421 IDLN 424
              N
Sbjct: 492 YRWN 495


>gi|115379593|ref|ZP_01466680.1| WD-40 repeat [Stigmatella aurantiaca DW4/3-1]
 gi|115363395|gb|EAU62543.1| WD-40 repeat [Stigmatella aurantiaca DW4/3-1]
          Length = 1197

 Score = 93.5 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 102/273 (37%), Gaps = 22/273 (8%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +  E   +++        +V+     +  + D                +    FSP+  +
Sbjct: 613 LRHEGDVWSAAFSPDGARIVTASEDQTARIWDGRSGQPLATLQGHLDDVRRATFSPDGAR 672

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +  A+ D        + D+R  +    +   +  + +  FS +G R + +  +D+   ++
Sbjct: 673 IVTASDDQ----TARIWDSRSGQLLSTLAGHQGPVWSAAFSPDGARIV-TASEDQTARLW 727

Query: 286 SVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                  + +RLT         +SA++SPD ++IV  SD +   +++    +        
Sbjct: 728 ----DGRSGQRLTLLQGHRDSVLSAAFSPDGTRIVTASD-DQTARIWGWDGHSVQLLATL 782

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           Q          +SP G  I      G    I    + G     L  ++ + +  +SP G 
Sbjct: 783 QGHRKMVRSAAFSPDGLRIVTASKDGTA-RIW-DGRSGPFLATLEHEAPVWSAAFSPDGS 840

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            ++ + K   D  ++++    +GR+  L+  PA
Sbjct: 841 LIVTASK---DHTARIW----DGRSGQLLALPA 866



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 60/325 (18%), Positives = 122/325 (37%), Gaps = 57/325 (17%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           R+WD +  + +   +            H   DD+ ++     G            +V+  
Sbjct: 641 RIWDGRSGQPLATLQ-----------GHL--DDVRRATFSPDGA----------RIVTAS 677

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              +  + D     +          ++   FSP+  ++  A+ D        L D R  +
Sbjct: 678 DDQTARIWDSRSGQLLSTLAGHQGPVWSAAFSPDGARIVTASEDQ----TARLWDGRSGQ 733

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINI 305
               +   R  +L+  FS +G R + +   D+   I+      ++ + L        +  
Sbjct: 734 RLTLLQGHRDSVLSAAFSPDGTRIV-TASDDQTARIWG--WDGHSVQLLATLQGHRKMVR 790

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           SA++SPD  +IV  + ++G  +++    +G S     + + EA  +   +SP G LI   
Sbjct: 791 SAAFSPDGLRIV-TASKDGTARIW----DGRSGPFLATLEHEAPVWSAAFSPDGSLIVTA 845

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN-----LQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                   I     DG   +LL   +      +Q+ T+SP G  ++ + +   D  ++L+
Sbjct: 846 SKDHTA-RIW----DGRSGQLLALPALQHERPIQSVTFSPEGSRIVTASE---DHTARLW 897

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
               +GR+  L+ T  +     W  
Sbjct: 898 ----DGRSGQLLATLKHEGS-VWSA 917



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 95/277 (34%), Gaps = 31/277 (11%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQ 223
           +  E+   ++        +V+     +  +   DG + + L      +  +    FSP+ 
Sbjct: 527 LKHERSVLSAAFSPDGTRIVTASDDQTARIWGWDGHSAQLLATLQGHENSVQSAAFSPDG 586

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             +  A+ D          D    +           + +  FS +G R + +  +D+   
Sbjct: 587 SLIITASSDG----SARRWDGHSGQFLAPPLRHEGDVWSAAFSPDGARIV-TASEDQTAR 641

Query: 284 IYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           I+       + + L      L     A++SPD ++IV  SD    +   +  S       
Sbjct: 642 IW----DGRSGQPLATLQGHLDDVRRATFSPDGARIVTASD---DQTARIWDSRSGQLLS 694

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPT 396
                +   +   +SP G  I  T    +   +     DG   + L        ++ +  
Sbjct: 695 TLAGHQGPVWSAAFSPDGARIV-TASEDQTARLW----DGRSGQRLTLLQGHRDSVLSAA 749

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +SP G  ++ +     D  ++++    +G +  L+ T
Sbjct: 750 FSPDGTRIVTASD---DQTARIW--GWDGHSVQLLAT 781



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/329 (13%), Positives = 103/329 (31%), Gaps = 45/329 (13%)

Query: 129  RLWDVKDRKQIIG---------KKFFSSPASWR----------KIAHTISDDIYQSITGE 169
            R+WD +  + +           +    SP   R          ++    S  +  ++  E
Sbjct: 852  RIWDGRSGQLLALPALQHERPIQSVTFSPEGSRIVTASEDHTARLWDGRSGQLLATLKHE 911

Query: 170  KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
               +++        +V+        + D                +    FSP+  ++  A
Sbjct: 912  GSVWSAAFSQDGARIVTASSDGMARIWDGRSGQPLATLQGHQGTVRSAAFSPDGARLITA 971

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            + D        + +    +           + +  FS +G R + +   D+   ++   L
Sbjct: 972  SSDG----TARIWNGHSGQLLAPPLRHEGDVWSAAFSPDGTRIV-TASDDQTARLWD-GL 1025

Query: 290  QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                         +  SA++SPD ++IV  +  +G  +++             Q+     
Sbjct: 1026 SGQPLSPPLKHGDVVWSAAFSPDGTRIV-TASSDGTARIW--DGRSGQALSTLQEHTGPV 1082

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLI 405
            +   +SP G  I  T        I     D    +LL +      +++   +SP G  ++
Sbjct: 1083 WSAAFSPDGTRIVTTGQDDPTACIW----DSHSGQLLAKLQGPPDDVRNAVFSPDGSRVV 1138

Query: 406  FSRKKDG---------DTGSKLYSIDLNG 425
             +   +             ++L+   L G
Sbjct: 1139 TTSSPEDGSRVVTPGHPGTARLWIASLEG 1167



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 91/245 (37%), Gaps = 30/245 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  +    FSP+   +  A+ D        L D+   +    + + RS +L+  FS
Sbjct: 485 LKGHENGVQSAAFSPDGSLIVTASDDQ----TALLWDSHSGQPLATLKHERS-VLSAAFS 539

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDRE 323
            +G R + +   D+   I+      ++ + L           SA++SPD S I+  +  +
Sbjct: 540 PDGTRIV-TASDDQTARIWG--WDGHSAQLLATLQGHENSVQSAAFSPDGSLII-TASSD 595

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  +      +           E   +   +SP G  I  T    +   I     DG   
Sbjct: 596 GSAR--RWDGHSGQFLAPPLRHEGDVWSAAFSPDGARIV-TASEDQTARIW----DGRSG 648

Query: 384 RLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           + L        +++  T+SP G  ++ +     D  ++++    + R+  L++T A    
Sbjct: 649 QPLATLQGHLDDVRRATFSPDGARIVTASD---DQTARIW----DSRSGQLLSTLAGHQG 701

Query: 440 PQWVG 444
           P W  
Sbjct: 702 PVWSA 706



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 78/205 (38%), Gaps = 20/205 (9%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             +     ++     +    +    + + +  FS +G   +++   D+   ++  D  S 
Sbjct: 465 PPEAFSGIMLGVSDLKYSSPLKGHENGVQSAAFSPDG-SLIVTASDDQTALLW--DSHSG 521

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                       +SA++SPD ++IV  SD +   +++    + +      Q  E S    
Sbjct: 522 QPLATLKHERSVLSAAFSPDGTRIVTASD-DQTARIWGWDGHSAQLLATLQGHENSVQSA 580

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSR 408
            +SP G LI      G          DG   + L      + ++ +  +SP G  ++ + 
Sbjct: 581 AFSPDGSLIITASSDGSARRW-----DGHSGQFLAPPLRHEGDVWSAAFSPDGARIVTAS 635

Query: 409 KKDGDTGSKLYSIDLNGRNETLINT 433
           +   D  ++++    +GR+   + T
Sbjct: 636 E---DQTARIW----DGRSGQPLAT 653


>gi|255691544|ref|ZP_05415219.1| prolyl oligopeptidase family protein [Bacteroides finegoldii DSM
           17565]
 gi|260622936|gb|EEX45807.1| prolyl oligopeptidase family protein [Bacteroides finegoldii DSM
           17565]
          Length = 700

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 105/312 (33%), Gaps = 60/312 (19%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------D 232
            +    + L  M+ DG+  R LT     I      SP+ +K+ + +             D
Sbjct: 121 SNDSGSSQLYEMNPDGSERRQLTNYDGDIEGF-SISPDGKKLLFISQVKTKDSTVDKYPD 179

Query: 233 DEDILRVYLMDTRIDRAPKRIG--------NFRSMILA----------------P----- 263
                 + + D       + +         +F    ++                P     
Sbjct: 180 LPKATGIIVTDLMYKHWDEWVTMAPHPFIADFDGNSISNVIDILDGEPYESPMRPWGSIE 239

Query: 264 --RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLFINISASYSPD 312
              +++   +   + +K            DIY  DL +  TE +T      + +  YSPD
Sbjct: 240 QLAWNTTSDKVAYTCRKKTGLEYAISTNSDIYIYDLNTKKTENITEENKGYDTNPQYSPD 299

Query: 313 SSQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
              I ++S +R+G      +L++M     +++ +S+  E++    VW     +I FT   
Sbjct: 300 GKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFVWGADAKVIYFTGVW 359

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +  I  +       + +           +  G  LI +++     G ++Y++ L+G  
Sbjct: 360 HGESQIYALDLANDSVKAITSGMYDYEGV-ALFGDKLI-AKRHSMSMGDEIYTVALDGST 417

Query: 428 ETLINTPAYASD 439
             L        D
Sbjct: 418 TQLTQENKQIYD 429



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 49/321 (15%), Positives = 112/321 (34%), Gaps = 69/321 (21%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG++   +T +  Q      +     K+A+ + D     ++Y 
Sbjct: 74  YSVPENKSNREVFVMNADGSDNLQITHTPYQENEV-TWIKGGSKLAFLSNDSGSS-QLYE 131

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------------- 278
           M+       +++ N+   I     S +GK+ L   Q                        
Sbjct: 132 MNPD-GSERRQLTNYDGDIEGFSISPDGKKLLFISQVKTKDSTVDKYPDLPKATGIIVTD 190

Query: 279 ----------DEAMDIYSVDLQSNATERLTNTLFINISA--------------SYSPDSS 314
                       A   +  D   N+   + + L  +                 +++  S 
Sbjct: 191 LMYKHWDEWVTMAPHPFIADFDGNSISNVIDIL--DGEPYESPMRPWGSIEQLAWNTTSD 248

Query: 315 QIVFE-SDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++ +    + G          +Y+   N    + I+++ +    +P +SP G  IA+   
Sbjct: 249 KVAYTCRKKTGLEYAISTNSDIYIYDLNTKKTENITEENKGYDTNPQYSPDGKYIAWQSM 308

Query: 367 SGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             + +      + +M  +  ++R + +  +SN+ A  W    + + F+    G+  S++Y
Sbjct: 309 ERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFVWGADAKVIYFTGVWHGE--SQIY 366

Query: 420 SIDLNGRNETLINTPAYASDP 440
           ++DL   +   I +  Y  + 
Sbjct: 367 ALDLANDSVKAITSGMYDYEG 387



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 93/280 (33%), Gaps = 67/280 (23%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISV------QKD 279
           T D     +V +  + I    KR+          I     S +GK+   +V      +  
Sbjct: 21  TKDAGKTDQVLIEKSDIKIEGKRMTPEALWAMGRIGGFAVSPDGKKIAYTVAYYSVPENK 80

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +++ ++   +   ++T+T +     ++    S++ F S+  G  QLY M  +GS+++
Sbjct: 81  SNREVFVMNADGSDNLQITHTPYQENEVTWIKGGSKLAFLSNDSGSSQLYEMNPDGSERR 140

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---------------------------- 371
           +++ + +        SP G  + F      K                             
Sbjct: 141 QLT-NYDGDIEGFSISPDGKKLLFISQVKTKDSTVDKYPDLPKATGIIVTDLMYKHWDEW 199

Query: 372 -----AIGVMKKDGSQERLLVEDSNLQAPTWSPS--------------GRSLIFS-RKKD 411
                   +   DG+    ++ D     P  SP                  + ++ RKK 
Sbjct: 200 VTMAPHPFIADFDGNSISNVI-DILDGEPYESPMRPWGSIEQLAWNTTSDKVAYTCRKKT 258

Query: 412 G-----DTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           G      T S +Y  DLN +    I      Y ++PQ+  
Sbjct: 259 GLEYAISTNSDIYIYDLNTKKTENITEENKGYDTNPQYSP 298



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/277 (13%), Positives = 85/277 (30%), Gaps = 63/277 (22%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+ +K+AY        +++    V++M+       + I +         +   G + 
Sbjct: 59  AVSPDGKKIAYTVAYYSVPENKSNREVFVMNADGSDNLQ-ITHTPYQENEVTWIKGGSKL 117

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES------------ 320
                   +  +Y ++   +   +LTN        S SPD  +++F S            
Sbjct: 118 AFLSNDSGSSQLYEMNPDGSERRQLTNYDGDIEGFSISPDGKKLLFISQVKTKDSTVDKY 177

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQDKEAS 348
                                           D +G     V+     +          S
Sbjct: 178 PDLPKATGIIVTDLMYKHWDEWVTMAPHPFIADFDGNSISNVIDILDGEPYESPMRPWGS 237

Query: 349 YFDPVWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWS 398
                W+   D +A+T                I +   +  +   + E+       P +S
Sbjct: 238 IEQLAWNTTSDKVAYTCRKKTGLEYAISTNSDIYIYDLNTKKTENITEENKGYDTNPQYS 297

Query: 399 PSGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLIN 432
           P G+ + + S ++DG     ++L+ ++L    +  ++
Sbjct: 298 PDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVS 334


>gi|116623625|ref|YP_825781.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226787|gb|ABJ85496.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 885

 Score = 93.2 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 52/285 (18%), Positives = 106/285 (37%), Gaps = 22/285 (7%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-SRDQILFEPRFS-PNQQKVAY 228
           G  + R+ +V  S         +      GA        +R    +   F+      + Y
Sbjct: 523 GYADGRLFYVDASGALTASTLDIAGAKVSGAPQVIAVKVARSPSTYYSSFAIAENSTLVY 582

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--KDEAMDIYS 286
           +  +  +  ++   D       K  G+  S++  P  S +GK         K   +D++ 
Sbjct: 583 SADNVTNHSQLTWFDESGKETGK--GSPVSVLANPALSPDGKWVAYDSNDFKAGNVDVWI 640

Query: 287 VD-LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQD 344
            D ++  +  R T      ++  +S D S I + +       + + +++G   +K +S  
Sbjct: 641 NDFVRGGS--RFTFNPAEEVTPIWSRDGSTIAYRTLGNVVPMVQLKKASGLEPEKSLSPL 698

Query: 345 KEASY--FDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPS 400
            +AS       WS  G  I    + S   + + V+  DG + R  L    N      SP 
Sbjct: 699 GDASTDIMANSWSVDGREILCNFQTSKGTWELVVVPVDGGKPRPFLSGLGNKMNGQISPD 758

Query: 401 GRSLIFSRKKDGDTGSKLYSID---LNGRNETLINTPAYASDPQW 442
           G+ + ++  + GD   ++Y+       G+ +    +    S+P+W
Sbjct: 759 GKWVAYASNETGDW--EIYATTYPAAAGKWQ---VSRGGGSEPRW 798



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 70/201 (34%), Gaps = 9/201 (4%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +L  P  SP+ + VAY + D +    V +      R   R     +  + P +S +G  
Sbjct: 610 SVLANPALSPDGKWVAYDSNDFK-AGNVDVWINDFVRGGSRFTFNPAEEVTPIWSRDGST 668

Query: 272 ALISVQKDEAMDIYSVDLQS----NATERLTNTLFINISASYSPDSSQIV--FESDREGK 325
                  +    +            +   L +     ++ S+S D  +I+  F++  +G 
Sbjct: 669 IAYRTLGNVVPMVQLKKASGLEPEKSLSPLGDASTDIMANSWSVDGREILCNFQTS-KGT 727

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            +L V+  +G   +        +  +   SP G  +A+       + I       +  + 
Sbjct: 728 WELVVVPVDGGKPRPFLS-GLGNKMNGQISPDGKWVAYASNETGDWEIYATTYPAAAGKW 786

Query: 386 LVEDSNLQAPTWSPSGRSLIF 406
            V       P W   G+++ +
Sbjct: 787 QVSRGGGSEPRWRGDGKAIFY 807



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 59/176 (33%), Gaps = 11/176 (6%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-- 252
           V   D                 P +S +   +AY      +++ +  +       P++  
Sbjct: 638 VWINDFVRGGSRFTFNPAEEVTPIWSRDGSTIAY--RTLGNVVPMVQLKKASGLEPEKSL 695

Query: 253 --IGNFRSMILAPRFSSNGKRAL--ISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +G+  + I+A  +S +G+  L      K    ++  V +         + L   ++  
Sbjct: 696 SPLGDASTDIMANSWSVDGREILCNFQTSK-GTWELVVVPVDGGKPRPFLSGLGNKMNGQ 754

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            SPD   + + S+  G  ++Y      +  K   Q       +P W   G  I + 
Sbjct: 755 ISPDGKWVAYASNETGDWEIYATTYPAAAGK--WQVSRGGGSEPRWRGDGKAIFYI 808



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 57/171 (33%), Gaps = 21/171 (12%)

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
             S +GK          D    +Y   + S +   +           +SPD+  + F + 
Sbjct: 347 AISRDGKWLAYVSPGVSDAIPTVYVQRVGSPSVRAI-QGSEGGTYPFWSPDNQYVAFFA- 404

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                +L      G + + ++    A      W  +G +I ++  SG    +  +  DGS
Sbjct: 405 ---NGKLRKAPLAGGNPQTVTTVGIAPRGG-SWGSKG-VILYSPDSGGP--LWRVNADGS 457

Query: 382 QERLLV-----EDSNLQAPTWSPSGRSLI-----FSRKKDGDTGSKLYSID 422
             R         +S+ + P +   G   +     FS  +D      L S+ 
Sbjct: 458 GARPATKMLSSTESSHRWPLFLADGDHFLMFGGNFSEVQDNANAIHLGSLS 508



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 76/264 (28%), Gaps = 21/264 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L      G N + +T           +      + Y+      + RV    +    A K 
Sbjct: 408 LRKAPLAGGNPQTVTTVGIAPRGG-SWGSKG-VILYSPDSGGPLWRVNADGSGARPATKM 465

Query: 253 IGNFRSMILAPRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           + +  S    P F ++G   L      S  +D A  I+   L ++ +  L N      SA
Sbjct: 466 LSSTESSHRWPLFLADGDHFLMFGGNFSEVQDNANAIHLGSLSNSKSTPLVNARS---SA 522

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--------ISQDKEASYFDPVWSPQGD 359
            Y+ D    +F  D  G      +   G+            +++     Y     +    
Sbjct: 523 GYA-DGR--LFYVDASGALTASTLDIAGAKVSGAPQVIAVKVARSPSTYYSSFAIAENST 579

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           L+           +    + G +       S L  P  SP G+ + +           ++
Sbjct: 580 LVYSADNVTNHSQLTWFDESGKETGKGSPVSVLANPALSPDGKWVAYDSNDFKAGNVDVW 639

Query: 420 SIDLNGRNETLINTPAYASDPQWV 443
             D           PA    P W 
Sbjct: 640 INDFVRGGSRFTFNPAEEVTPIWS 663



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 33/117 (28%), Gaps = 9/117 (7%)

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLV 387
           V +   +D+   S            S  G  +A+     S     + V +      R + 
Sbjct: 324 VRRPEPADRTEFSIAVSGEVNHLAISRDGKWLAYVSPGVSDAIPTVYVQRVGSPSVRAIQ 383

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD-PQWV 443
                  P WSP  + + F          KL    L G N   + T   A     W 
Sbjct: 384 GSEGGTYPFWSPDNQYVAFFAN------GKLRKAPLAGGNPQTVTTVGIAPRGGSWG 434


>gi|300864880|ref|ZP_07109727.1| putative WD-40 repeat [Oscillatoria sp. PCC 6506]
 gi|300337122|emb|CBN54877.1| putative WD-40 repeat [Oscillatoria sp. PCC 6506]
          Length = 1696

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 112/289 (38%), Gaps = 18/289 (6%)

Query: 145  FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
              S     KI +  + ++  ++ G + D  S       ++ SG    ++ +   D   + 
Sbjct: 1310 SGSADDTIKIWNAYTGELLNTLRGHQDDVRSVSFNRDGTIASGSYDKTIKIWQPDSTPLS 1369

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             +       ++   FSP+ + +A  + D      V +  T      K + + +  + A  
Sbjct: 1370 KILAGHSDWIYSISFSPDGKIIASGSADK----TVKIWRTE-GSLVKTVFSNQGSVSAVS 1424

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS  G     +  +++ + ++  +L+    + L        S S++P+ S +   SD   
Sbjct: 1425 FSPKGD-IFATAGENKTVKLW--NLEGKELKTLKGHDGEVFSVSFNPEGSVVATASD--- 1478

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             + + +   +G   K  + + + S     +SP G +IA               KD S  +
Sbjct: 1479 DKTVKLWNRDGKLLK--TLNHQESVNSVSFSPNGKIIASASEDKTVKLWRFNGKDTSLLQ 1536

Query: 385  LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             L    ++ + ++SP G  +  +     D   KL+  +L+GR    +N+
Sbjct: 1537 TLKHADSVNSVSFSPQGDIIASASN---DKTLKLW--NLDGRLRQTLNS 1580



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 82/231 (35%), Gaps = 20/231 (8%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G   R       + +    FSP+   +A A+ D    +R++  + ++   P +       
Sbjct: 1076 GLQERNSFEGHGKGISGVSFSPDGNTIASASADC--TVRIWNKNGQVIGVPLQ---HNDS 1130

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            +    FS +G     +   D+   ++ V     A     +      S S+SPD   I   
Sbjct: 1131 LFGISFSPDGTTIA-TTSADKIAKLWRV-KDGVAIATFRSHDEPVTSVSFSPDGQTIATA 1188

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            S     ++   + + G    R             +SP G  IA     G    + +   D
Sbjct: 1189 S----YDRTVKLWTKGGILLRTLIGHRDWVLGVSFSPDGKTIASASKDGT---VKLWNLD 1241

Query: 380  GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            G + R L    S + + ++S   +++  +     D   KL+  +L+G+   
Sbjct: 1242 GKELRTLKGHTSWVYSVSFSRDRKTIATAS---ADNTIKLW--NLDGKELR 1287



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 83/241 (34%), Gaps = 27/241 (11%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
               S D+ +    FSP+ Q +A A+YD     R   + T+     + +   R  +L   F
Sbjct: 1165 TFRSHDEPVTSVSFSPDGQTIATASYD-----RTVKLWTKGGILLRTLIGHRDWVLGVSF 1219

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S +GK    S  KD  + ++  +L       L        S S+S D   I   S     
Sbjct: 1220 SPDGKTIA-SASKDGTVKLW--NLDGKELRTLKGHTSWVYSVSFSRDRKTIATAS---AD 1273

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-- 383
              + +   +G + + + +          +S  G+ IA          I +      +   
Sbjct: 1274 NTIKLWNLDGKELRTL-KGHNDHVVSVSFSNDGETIASGSADDT---IKIWNAYTGELLN 1329

Query: 384  RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             L     ++++ +++  G  +        D   K++  D    ++ L      A    W+
Sbjct: 1330 TLRGHQDDVRSVSFNRDGT-IASGSY---DKTIKIWQPDSTPLSKIL------AGHSDWI 1379

Query: 444  G 444
             
Sbjct: 1380 Y 1380



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 82/216 (37%), Gaps = 13/216 (6%)

Query: 191  NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             ++ + + +G  ++ L    D  +F   F+P    VA A+ D        +     D   
Sbjct: 1439 KTVKLWNLEGKELKTL-KGHDGEVFSVSFNPEGSVVATASDDK------TVKLWNRDGKL 1491

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             +  N +  + +  FS NGK    S  +D+ + ++  + +  +  +         S S+S
Sbjct: 1492 LKTLNHQESVNSVSFSPNGKIIA-SASEDKTVKLWRFNGKDTSLLQTLKHADSVNSVSFS 1550

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            P    I   S+    + L +   +G  + R + +         +SP G LIA        
Sbjct: 1551 PQGDIIASASN---DKTLKLWNLDG--RLRQTLNSSDRVIGSSFSPDGKLIALANADNTI 1605

Query: 371  FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                 +  + +  + +   + + +  +SP+ + L F
Sbjct: 1606 TLWQFVGTNATLLKTIQHTARVISLGFSPNSKILAF 1641


>gi|256419972|ref|YP_003120625.1| peptidase S41 [Chitinophaga pinensis DSM 2588]
 gi|256034880|gb|ACU58424.1| peptidase S41 [Chitinophaga pinensis DSM 2588]
          Length = 1075

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 86/243 (35%), Gaps = 38/243 (15%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +L  P  S  Q ++A+    D              + P+RI     + L P  S +GK  
Sbjct: 28  LLRSPSIS--QHQIAFNYAGD------IWTTDENGQHPQRITVNPDVELEPMLSPDGKWI 79

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG----KEQL 328
             S   D  +D+Y V +      R+T+    +I   +   + +I+F S R       +QL
Sbjct: 80  AFSGNYDGNVDLYVVSVNGGIPRRITHHPDADIVRGW-HGNDKILFASTRNSFSMRFQQL 138

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------------KFSGEKF- 371
           + +  NG    ++   +         SP G   A+                  + G    
Sbjct: 139 FEVSVNGGMPVKLKMPE---AHQGNISPDGLYTAYIKNPDPTERSGTYRPFKHYRGGNMP 195

Query: 372 AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            I +     +    + +  +N   P W   G  + F   ++G     ++   ++G+  T 
Sbjct: 196 KIWIFNNQTNTVIEIPDAGANNIRPVWL--GNDVYFLSDRNGTM--NIFRYSISGKTLTQ 251

Query: 431 INT 433
           I++
Sbjct: 252 ISS 254



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 62/388 (15%), Positives = 126/388 (32%), Gaps = 60/388 (15%)

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR-LWDV-KDRKQIIGK 142
               ++IT+       + W   G   ++         +   + F+ L++V  +    +  
Sbjct: 98  GGIPRRITHHPDADIVRGW--HGNDKILFASTR----NSFSMRFQQLFEVSVNGGMPVKL 151

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           K   +        +   D +Y +             +       G     + + + +  N
Sbjct: 152 KMPEA-----HQGNISPDGLYTAYIKNPDPTERSGTYRPFKHYRGGNMPKIWIFN-NQTN 205

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                P        P +  N     Y   D    + ++       +   +I + +   + 
Sbjct: 206 TVIEIPDAGANNIRPVWLGN---DVYFLSDRNGTMNIFRYSI-SGKTLTQISSHKDYDVK 261

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASY---------- 309
             FS +GK  +     ++A  I   D  SN +  LT +L  ++      Y          
Sbjct: 262 TLFS-DGKTLVY----EQAGRINKWDAASNKSTALTISLEADLPYKRPHYINATVGALRN 316

Query: 310 ---SPDSSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              SP   +    F  D      +  + +   + + I+         PVWSP G  IA+ 
Sbjct: 317 VNLSPTGVRAAVEFRGD------VLTVPAEKGNIRNITATPGVHERAPVWSPDGKSIAYF 370

Query: 365 KFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +G ++A+ +  +   +      L E S   +P WSP  + ++F+     D   +LY +
Sbjct: 371 SDAGGEYALHIRDQKAEKPAQIIPLGETSFFYSPLWSPDSKKILFA-----DKKLRLYYV 425

Query: 422 DLNGRNETLINTPAYAS-----DPQWVG 444
           D   +  T I+  +Y          W  
Sbjct: 426 DTESKKVTQIDEDSYDRPDQTFSANWSP 453



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 59/172 (34%), Gaps = 11/172 (6%)

Query: 248 RAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFIN 304
              + I         AP +S +GK             ++  D ++    ++         
Sbjct: 342 GNIRNITATPGVHERAPVWSPDGKSIAYFSDAGGEYALHIRDQKAEKPAQIIPLGETSFF 401

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLI 361
            S  +SPDS +I+F    + K +LY + +      +I   S D+    F   WSP    I
Sbjct: 402 YSPLWSPDSKKILFA---DKKLRLYYVDTESKKVTQIDEDSYDRPDQTFSANWSPDSRWI 458

Query: 362 AFTKFSGEKFA-IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
            + K        + +      +     +  S    P +S +G+ + F    +
Sbjct: 459 TYNKRLPNSLQAVFLYNIADKKSTQATDGRSEAAEPVFSKNGKYIFFIASTN 510



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 88/224 (39%), Gaps = 13/224 (5%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
             I    G   +  L  +    +   +  +  +  +  NIR +T +       P +SP+ 
Sbjct: 305 HYINATVGALRNVNLSPTGVRAAVEFRGDVLTVPAEKGNIRNITATPGVHERAPVWSPDG 364

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKDEAM 282
           + +AY + D      +++ D + ++  + I    +    +P +S + K+ L +   D+ +
Sbjct: 365 KSIAYFS-DAGGEYALHIRDQKAEKPAQIIPLGETSFFYSPLWSPDSKKILFA---DKKL 420

Query: 283 DIYSVDLQSNATERLTNTLFINI-----SASYSPDSSQIVFESD-REGKEQLYVMQSNGS 336
            +Y VD +S    ++ +    +      SA++SPDS  I +        + +++      
Sbjct: 421 RLYYVDTESKKVTQI-DEDSYDRPDQTFSANWSPDSRWITYNKRLPNSLQAVFLYNIADK 479

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              + + D  +   +PV+S  G  I F   +      G +    
Sbjct: 480 KSTQAT-DGRSEAAEPVFSKNGKYIFFIASTNYAQNTGWLDMTS 522



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 83/236 (35%), Gaps = 30/236 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   D +G + + +T + D +  EP  SP+ + +A++   D + + +Y++       P+
Sbjct: 46  DIWTTDENGQHPQRITVNPD-VELEPMLSPDGKWIAFSGNYDGN-VDLYVVSVN-GGIPR 102

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISA 307
           RI +     +   +  N  + L +  ++        ++ V +      +L          
Sbjct: 103 RITHHPDADIVRGWHGN-DKILFASTRNSFSMRFQQLFEVSVNGGMPVKLKMPEA--HQG 159

Query: 308 SYSPDSSQIVFESD----------------REGK-EQLYVMQSNGSDQKRISQDKEASYF 350
           + SPD     +  +                R G   ++++  +  +    I  D  A+  
Sbjct: 160 NISPDGLYTAYIKNPDPTERSGTYRPFKHYRGGNMPKIWIFNNQTNTVIEI-PDAGANNI 218

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            PVW   G+ + F         I      G     +    +    T    G++L++
Sbjct: 219 RPVWL--GNDVYFLSDRNGTMNIFRYSISGKTLTQISSHKDYDVKTLFSDGKTLVY 272



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 11/138 (7%), Positives = 46/138 (33%), Gaps = 2/138 (1%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + +        + P +SP+ +K+ +A      +  V     ++ +  +   +      +
Sbjct: 390 AQIIPLGETSFFYSPLWSPDSKKILFADKKLR-LYYVDTESKKVTQIDEDSYDRPDQTFS 448

Query: 263 PRFSSNGKRALISVQKDEAMD-IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
             +S + +    + +   ++  ++  ++    + + T+         +S +   I F + 
Sbjct: 449 ANWSPDSRWITYNKRLPNSLQAVFLYNIADKKSTQATDGRSEAAEPVFSKNGKYIFFIAS 508

Query: 322 REGKEQLYVMQSNGSDQK 339
               +    +     +  
Sbjct: 509 TNYAQNTGWLDMTSYEHP 526


>gi|145484466|ref|XP_001428243.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124395327|emb|CAK60845.1| unnamed protein product [Paramecium tetraurelia]
          Length = 738

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 53/310 (17%), Positives = 102/310 (32%), Gaps = 39/310 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                  L +   LWDVK  +Q I               H   D +        G     
Sbjct: 418 TILASGSLDMSISLWDVKTGQQKIKLD-----------GHR--DQVNSICFSSDG----- 459

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               S S V     NS+ + D      +         +    FSP+   ++  + D+   
Sbjct: 460 TTLASGSGVLNGDDNSIRLWDIKTGQQKAKLDGHTDCVNSVYFSPDGNTLSSCSQDN--- 516

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D  I+    ++      + +  F+ +G     S   DE++ ++  D+ +   + 
Sbjct: 517 -SIRLWDIEIELQKVKLDYHTKTVHSVCFTPDGLTIA-SGSDDESISLW--DVNTGQQKA 572

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L        S  +SPD + +V  S     + + +       QK              +S
Sbjct: 573 KLQGHSDKVWSLCFSPDGTTLVSGSS---DKSICLWDVKTGFQKGKLDGHSRQVMSVCFS 629

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGD 413
           P G  +A   +      I +      Q++ ++     Q  +  +SP G +L       G 
Sbjct: 630 PDGTTLASGSYDNS---ILLWDIKTGQQKAILHGHTKQVMSICFSPDGTTLA-----SGS 681

Query: 414 TGSKLYSIDL 423
           + + +Y  D+
Sbjct: 682 SDNSIYLWDV 691



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 108/321 (33%), Gaps = 36/321 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G     +   LWDVK  +            + R   H   D +        G  
Sbjct: 375 GQTLASGSSDYSIS--LWDVKTEQL-----------NARLFGHI--DSVQTVCFSPDGTI 419

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YD 232
                       SG +  S+ + D      +         +    FS +   +A  +   
Sbjct: 420 L----------ASGSLDMSISLWDVKTGQQKIKLDGHRDQVNSICFSSDGTTLASGSGVL 469

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           + D   + L D +  +   ++      + +  FS +G     S  +D ++ ++ ++++  
Sbjct: 470 NGDDNSIRLWDIKTGQQKAKLDGHTDCVNSVYFSPDGNTLS-SCSQDNSIRLWDIEIELQ 528

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             + L        S  ++PD   I   SD    E + +   N   QK   Q      +  
Sbjct: 529 KVK-LDYHTKTVHSVCFTPDGLTIASGSD---DESISLWDVNTGQQKAKLQGHSDKVWSL 584

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP G  +  +  S +   +  +K    + +L      + +  +SP G +L        
Sbjct: 585 CFSPDGTTLV-SGSSDKSICLWDVKTGFQKGKLDGHSRQVMSVCFSPDGTTLASGSY--- 640

Query: 413 DTGSKLYSIDLNGRNETLINT 433
           D    L+ I   G+ + +++ 
Sbjct: 641 DNSILLWDIK-TGQQKAILHG 660



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 88/251 (35%), Gaps = 24/251 (9%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              +C+ D     I+++   +  +     FSPN   +A+      D   +YL + +  + 
Sbjct: 254 HKFICLWDVKTGKIKFVLKGKSNVNSV-CFSPNGTTLAF-----GDCEFIYLWNLKTGKQ 307

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLFI--- 303
             ++ + ++ I   +FS +G   +      + +D Y +   D+ +   +++         
Sbjct: 308 ILKLISHQNKIQTVQFSPDGTTLVSCSGSGQLLDNYFILLWDVITG--QQIGGLYGYLKK 365

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +S  +SPD   +   S       + +                 S     +SP G ++A 
Sbjct: 366 IMSVCFSPDGQTLASGSS---DYSISLWDVKTEQLNARLFGHIDSVQTVCFSPDGTILAS 422

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRK--KDGDTGSKLY 419
                   +I +      Q+++ ++    Q  +  +S  G +L          D   +L+
Sbjct: 423 GSLD---MSISLWDVKTGQQKIKLDGHRDQVNSICFSSDGTTLASGSGVLNGDDNSIRLW 479

Query: 420 SIDLNGRNETL 430
            I    +   L
Sbjct: 480 DIKTGQQKAKL 490



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 91/275 (33%), Gaps = 40/275 (14%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           L +G  +  G D      RLWD+K  +Q                 HT  D +        
Sbjct: 462 LASGSGVLNGDDN---SIRLWDIKTGQQKAKLD-----------GHT--DCVNSVYFSPD 505

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G           ++ S    NS+ + D +    +       + +    F+P+   +A  +
Sbjct: 506 G----------NTLSSCSQDNSIRLWDIEIELQKVKLDYHTKTVHSVCFTPDGLTIASGS 555

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D+     + L D    +   ++      + +  FS +G   + S   D+++ ++  D++
Sbjct: 556 DDE----SISLWDVNTGQQKAKLQGHSDKVWSLCFSPDGTTLV-SGSSDKSICLW--DVK 608

Query: 291 SNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +   + +L       +S  +SPD + +   S       + +       QK I        
Sbjct: 609 TGFQKGKLDGHSRQVMSVCFSPDGTTLASGSY---DNSILLWDIKTGQQKAILHGHTKQV 665

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
               +SP G  +A          I +      + +
Sbjct: 666 MSICFSPDGTTLASGSSDNS---IYLWDVKTGELK 697



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 50/320 (15%), Positives = 103/320 (32%), Gaps = 43/320 (13%)

Query: 116 VIKEGKDRLRVEFR--LWDVKDRKQIIGK-KFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           V   G  +L   +   LWDV   +QI G   +                 I        G 
Sbjct: 331 VSCSGSGQLLDNYFILLWDVITGQQIGGLYGYLKK--------------IMSVCFSPDG- 375

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                    +++ SG    S+ + D     +          +    FSP+   +A  + D
Sbjct: 376 ---------QTLASGSSDYSISLWDVKTEQLNARLFGHIDSVQTVCFSPDGTILASGSLD 426

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSV-DLQ 290
                 + L D +  +   ++   R  + +  FSS+G      S   +   +   + D++
Sbjct: 427 M----SISLWDVKTGQQKIKLDGHRDQVNSICFSSDGTTLASGSGVLNGDDNSIRLWDIK 482

Query: 291 SNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +   + +L        S  +SPD + +   S       + +       QK        + 
Sbjct: 483 TGQQKAKLDGHTDCVNSVYFSPDGNTLSSCSQ---DNSIRLWDIEIELQKVKLDYHTKTV 539

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               ++P G  IA +    E  ++  +     + +L      + +  +SP G +L+    
Sbjct: 540 HSVCFTPDGLTIA-SGSDDESISLWDVNTGQQKAKLQGHSDKVWSLCFSPDGTTLV---- 594

Query: 410 KDGDTGSKLYSIDLNGRNET 429
             G +   +   D+    + 
Sbjct: 595 -SGSSDKSICLWDVKTGFQK 613



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 70/211 (33%), Gaps = 20/211 (9%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N   +         +  FSP+ + +A       +   + L D +  +  K +   +S + 
Sbjct: 224 NEVMVLNGHLNGFNQVFFSPDGRSLASC----GNHKFICLWDVKTGK-IKFVLKGKSNVN 278

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFE 319
           +  FS NG          +   IY  +L++     + +++   I     +SPD + +V  
Sbjct: 279 SVCFSPNGTTLAF----GDCEFIYLWNLKTGKQILKLISHQNKIQTV-QFSPDGTTLVSC 333

Query: 320 SDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           S          + +       Q               +SP G  +A        ++I + 
Sbjct: 334 SGSGQLLDNYFILLWDVITGQQIGGLYGYLKKIMSVCFSPDGQTLA---SGSSDYSISLW 390

Query: 377 KKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
                Q   RL     ++Q   +SP G  L 
Sbjct: 391 DVKTEQLNARLFGHIDSVQTVCFSPDGTILA 421



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 55/171 (32%), Gaps = 15/171 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G+             I   D+++   + +        S  +SP+ + + F      
Sbjct: 241 FSPDGRSLA---SCGNHKFICLWDVKTGKIKFVLKGKSNVNSVCFSPNGTTLAF----GD 293

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGS 381
            E +Y+       Q       +       +SP G  +     SG   + + I +      
Sbjct: 294 CEFIYLWNLKTGKQILKLISHQNKIQTVQFSPDGTTLVSCSGSGQLLDNYFILLWDVITG 353

Query: 382 QER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           Q+   L      + +  +SP G++L        D    L+ +     N  L
Sbjct: 354 QQIGGLYGYLKKIMSVCFSPDGQTLA---SGSSDYSISLWDVKTEQLNARL 401


>gi|242805007|ref|XP_002484486.1| G-protein beta WD-40 repeats containing protein, putative
           [Talaromyces stipitatus ATCC 10500]
 gi|218717831|gb|EED17252.1| G-protein beta WD-40 repeats containing protein, putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 468

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 89/241 (36%), Gaps = 14/241 (5%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           + + V+     +L V D DG +        D  +    FSP+  +VA   +       V 
Sbjct: 78  TVTSVAFSPDGTLEVWDVDGGSCLKTLEGHDGYITSVAFSPDGTRVALGLFS----WAVK 133

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D       + +G     + +  FS +G R   S   D  + ++ VD  S   + L   
Sbjct: 134 IWDIGSGSCKEFLGAS-GTVSSVTFSPDGSRVA-SASWDSTVKVWDVDGDS-CLKTLERH 190

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD   +V  S R+   +++    +     +   D         +SP G  
Sbjct: 191 GDYVTSVAFSPDGKCVVSGS-RDSTVKIW--DVDSGRCLKTLIDHSNPVLSVSFSPAGSR 247

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +A +    +   I  +      + L      + +  +SP G+ ++   +   D+  K++ 
Sbjct: 248 VA-SSSEDKTVKIWDVDSGSCLKTLEGHGGAVTSVAFSPDGKCVVSGSR---DSAVKIWD 303

Query: 421 I 421
           +
Sbjct: 304 V 304



 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 93/256 (36%), Gaps = 22/256 (8%)

Query: 169 EKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
             GD+ + + F  +   VVSG   +++ + D D              +    FSP   +V
Sbjct: 189 RHGDYVTSVAFSPDGKCVVSGSRDSTVKIWDVDSGRCLKTLIDHSNPVLSVSFSPAGSRV 248

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A ++ D      V + D       K +      + +  FS +GK  ++S  +D A+ I+ 
Sbjct: 249 ASSSEDK----TVKIWDVDSGSCLKTLEGHGGAVTSVAFSPDGK-CVVSGSRDSAVKIWD 303

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V       + L        S  +SP  + IV  SD      + +   +      +   + 
Sbjct: 304 V----TCLKTLEGHRDWIRSVMFSPSGTHIVSLSD---DRSIKIWDVDSGAC--LQTIEH 354

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                  +SP G  +A +    + F +     +        + S +++  +SP G  +  
Sbjct: 355 GRVSSVAFSPDGTRMA-SGSDEKTFKVW--DVESGTCSNTYDHSRVRSVAFSPDGTRIAS 411

Query: 407 SRKKDGDTGSKLYSID 422
                 D  +K++ ++
Sbjct: 412 GSD---DETAKVWDVN 424



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 95/282 (33%), Gaps = 26/282 (9%)

Query: 165 SITGEKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
                  D+ + + + S+   V SG +  ++ + D D  N+          +    FSP+
Sbjct: 28  KTFTGHDDWVNSVAYSSDGTCVASGSVDETVKIWDVDSGNLLKTLKGHGGTVTSVAFSPD 87

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                           + + D       K +      I +  FS +G R  + +    A+
Sbjct: 88  GT--------------LEVWDVDGGSCLKTLEGHDGYITSVAFSPDGTRVALGLF-SWAV 132

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+  D+ S + +          S ++SPD S++   S       + V   +G    +  
Sbjct: 133 KIW--DIGSGSCKEFLGASGTVSSVTFSPDGSRVASAS---WDSTVKVWDVDGDSCLKTL 187

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           +          +SP G  +           I  +      + L+   + + + ++SP+G 
Sbjct: 188 ERHGDYVTSVAFSPDGKCVVSGSRDSTV-KIWDVDSGRCLKTLIDHSNPVLSVSFSPAGS 246

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            +  S +   D   K++ +D     +TL       +   +  
Sbjct: 247 RVASSSE---DKTVKIWDVDSGSCLKTLEGHGGAVTSVAFSP 285



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 86/223 (38%), Gaps = 15/223 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V S    +++ V D DG +           +    FSP+ + V   + D      V + 
Sbjct: 163 RVASASWDSTVKVWDVDGDSCLKTLERHGDYVTSVAFSPDGKCVVSGSRDS----TVKIW 218

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    R  K + +  + +L+  FS  G R   S  +D+ + I+ VD   +  + L     
Sbjct: 219 DVDSGRCLKTLIDHSNPVLSVSFSPAGSRVA-SSSEDKTVKIWDVD-SGSCLKTLEGHGG 276

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++SPD   +V  S R+   +++    + +  K +   ++      ++SP G  I 
Sbjct: 277 AVTSVAFSPDGKCVVSGS-RDSAVKIW----DVTCLKTLEGHRDW-IRSVMFSPSGTHIV 330

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 +  +I +   D       +E   + +  +SP G  + 
Sbjct: 331 SLS---DDRSIKIWDVDSGACLQTIEHGRVSSVAFSPDGTRMA 370



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 75/207 (36%), Gaps = 22/207 (10%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V + +       K        + +  +SS+G     S   DE + I+ VD   N  + L 
Sbjct: 16  VNVQNVGSGSCLKTFTGHDDWVNSVAYSSDGTCVA-SGSVDETVKIWDVD-SGNLLKTLK 73

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  S ++SPD +             L V   +G    +  +  +       +SP G
Sbjct: 74  GHGGTVTSVAFSPDGT-------------LEVWDVDGGSCLKTLEGHDGYITSVAFSPDG 120

Query: 359 DLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             +A   FS   +A+ +     GS +  L     + + T+SP G  +  +     D+  K
Sbjct: 121 TRVALGLFS---WAVKIWDIGSGSCKEFLGASGTVSSVTFSPDGSRVASASW---DSTVK 174

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           ++ +D +   +TL     Y +   +  
Sbjct: 175 VWDVDGDSCLKTLERHGDYVTSVAFSP 201


>gi|145507954|ref|XP_001439927.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407132|emb|CAK72530.1| unnamed protein product [Paramecium tetraurelia]
          Length = 349

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 87/243 (35%), Gaps = 21/243 (8%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ SG    S+C+ D      +         +    FSP+   +A  +YD      + L 
Sbjct: 35  TLASGSGDKSICLWDVKTGQQKAKLEGHSDGVNSVNFSPDGTTLASGSYDR----SIRLW 90

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTL 301
           D +  +   ++    S + +  FS +G        +     I   D+++   + +L    
Sbjct: 91  DVKTGQQKAKLDGQSSAVYSVNFSPDGTTLA---SRTSNNSILLWDVKTGQQKAKLEGHS 147

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               S ++SPD + +   S DR     + +       QK          +   +SP G  
Sbjct: 148 DSVNSVNFSPDGTTLASGSYDRS----IRLWDVKTGQQKAKLDGHSQPVYSVNFSPDGTT 203

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A   +      I +      Q++  ++  +    + ++SP G +L        D   +L
Sbjct: 204 LASGSYDRS---IRLWDVKTGQQKTKLDGHSDCVNSVSFSPDGTTLASGSY---DRSIRL 257

Query: 419 YSI 421
           + +
Sbjct: 258 WDV 260



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 70/212 (33%), Gaps = 38/212 (17%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQ---IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
                       RLWDVK  +Q   + G+                S  +Y       G  
Sbjct: 76  TTLASGSYDRSIRLWDVKTGQQKAKLDGQ----------------SSAVYSVNFSPDG-- 117

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    ++ S    NS+ + D      +         +    FSP+   +A  +YD 
Sbjct: 118 --------TTLASRTSNNSILLWDVKTGQQKAKLEGHSDSVNSVNFSPDGTTLASGSYDR 169

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L D +  +   ++      + +  FS +G     S   D ++ ++  D+++  
Sbjct: 170 ----SIRLWDVKTGQQKAKLDGHSQPVYSVNFSPDGTTLA-SGSYDRSIRLW--DVKTGQ 222

Query: 294 T-ERLTNTLFINISASYSPDSSQIVFES-DRE 323
              +L        S S+SPD + +   S DR 
Sbjct: 223 QKTKLDGHSDCVNSVSFSPDGTTLASGSYDRS 254


>gi|256822773|ref|YP_003146736.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Kangiella koreensis DSM 16069]
 gi|256796312|gb|ACV26968.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kangiella koreensis DSM 16069]
          Length = 686

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 133/399 (33%), Gaps = 61/399 (15%)

Query: 62  GGKVSEVVSK-DLQR-SDVFNL-----ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           G  V+ V+   DL+     F++     I +DS  +++T+  +      W++ G  +    
Sbjct: 48  GNSVAYVLRSTDLEADKGTFDIYLTSAIDEDSEPKQLTSDPAADTSPKWSADGKHLYFLS 107

Query: 115 RVIKEGKD---RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI----- 166
              + G +   R  V     +      +    +  S  + R +    S  ++        
Sbjct: 108 S--RSGTNQLWRYSVASESVEQVSDVPVSIGTYKVSAKNDRVV---FSASVFPECETLVC 162

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T EK +  S       S   G + + + V   D     +                 Q ++
Sbjct: 163 TKEKSEAAS------NSKQEGKLYDKMFVRHWD-----HWLDGT------------QSRL 199

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------KD 279
             A    +       +   ++       +          S +GK  + +++         
Sbjct: 200 FSAKLGSKPFSDATPLSHSLNGN--VPSSPFGGDEEYTISPDGKTVIFTLRIADKNEPTS 257

Query: 280 EAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREG----KEQLYVMQS 333
              D+Y V +       LT   L  +    +SPD  ++ + + DR G    + QL++   
Sbjct: 258 TNFDLYEVSISGGKVNNLTKENLAWDTYPVFSPDGKKLAWLAMDRPGFEADRRQLHIRDL 317

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                + +++  + S++   +S  G  +        K  I        Q   L ++  + 
Sbjct: 318 KSGKTENVTKTWDRSFYGFKFSKNGQQVFLYGNHIGKNVIWSFDLKTKQRSQLTDEGYVS 377

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           A         +I+ +  D +  + L+ +DLNG N+  + 
Sbjct: 378 AFDLGKD--KIIY-QYDDLNQPADLFVMDLNGDNKRQLT 413



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 84/262 (32%), Gaps = 78/262 (29%)

Query: 260 ILAPRFSSNGKRALISVQKD------EAMDIYSVDL--QSNATERLTNTLFINISASYSP 311
           + +P  S +G      ++           DIY      + +  ++LT+    + S  +S 
Sbjct: 39  VASPALSPDGNSVAYVLRSTDLEADKGTFDIYLTSAIDEDSEPKQLTSDPAADTSPKWSA 98

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-------- 363
           D   + F S R G  QL+         +++S D   S      S + D + F        
Sbjct: 99  DGKHLYFLSSRSGTNQLWRYSVASESVEQVS-DVPVSIGTYKVSAKNDRVVFSASVFPEC 157

Query: 364 ---------------TKFSGEKFAIGVMK-----KDGSQERL---------------LVE 388
                          +K  G+ +    ++      DG+Q RL               L  
Sbjct: 158 ETLVCTKEKSEAASNSKQEGKLYDKMFVRHWDHWLDGTQSRLFSAKLGSKPFSDATPLSH 217

Query: 389 DSNLQAPT----------WSPSGRSLIFS-----RKKDGDTGSKLYSIDLNG-------- 425
             N   P+           SP G+++IF+     + +   T   LY + ++G        
Sbjct: 218 SLNGNVPSSPFGGDEEYTISPDGKTVIFTLRIADKNEPTSTNFDLYEVSISGGKVNNLTK 277

Query: 426 RNETLINTPAYASDP---QWVG 444
            N      P ++ D     W+ 
Sbjct: 278 ENLAWDTYPVFSPDGKKLAWLA 299



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/290 (17%), Positives = 99/290 (34%), Gaps = 70/290 (24%)

Query: 214 LFEPRFSPNQQKVAYATYD-----DEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSS 267
           +  P  SP+   VAY         D+    +YL      D  PK++ +  +   +P++S+
Sbjct: 39  VASPALSPDGNSVAYVLRSTDLEADKGTFDIYLTSAIDEDSEPKQLTSDPAADTSPKWSA 98

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINI------------SASYSPDSS 314
           +GK       +     ++   + S + E++++    I              SAS  P+  
Sbjct: 99  DGKHLYFLSSRSGTNQLWRYSVASESVEQVSDVPVSIGTYKVSAKNDRVVFSASVFPECE 158

Query: 315 QIVFE---------SDREGK------EQLYVMQSNGSDQKRIS----------------- 342
            +V           S +EGK       + +    +G+  +  S                 
Sbjct: 159 TLVCTKEKSEAASNSKQEGKLYDKMFVRHWDHWLDGTQSRLFSAKLGSKPFSDATPLSHS 218

Query: 343 ------QDKEASYFDPVWSPQGDLIAFTKF-------SGEKFAIGVMKKDGSQERLLVED 389
                         +   SP G  + FT         +   F +  +   G +   L ++
Sbjct: 219 LNGNVPSSPFGGDEEYTISPDGKTVIFTLRIADKNEPTSTNFDLYEVSISGGKVNNLTKE 278

Query: 390 SNLQA--PTWSPSGRSLIF-SRKKDGDTG--SKLYSIDL-NGRNETLINT 433
           +      P +SP G+ L + +  + G      +L+  DL +G+ E +  T
Sbjct: 279 NLAWDTYPVFSPDGKKLAWLAMDRPGFEADRRQLHIRDLKSGKTENVTKT 328



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 72/169 (42%), Gaps = 8/169 (4%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----D 235
           +++          L  +   G  +  LT         P FSP+ +K+A+   D      D
Sbjct: 249 IADKNEPTSTNFDLYEVSISGGKVNNLTKENLAWDTYPVFSPDGKKLAWLAMDRPGFEAD 308

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             ++++ D +  +       +       +FS NG++  +         I+S DL++    
Sbjct: 309 RRQLHIRDLKSGKTENVTKTWDRSFYGFKFSKNGQQVFLYGNHIGKNVIWSFDLKTKQRS 368

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQ 343
           +LT+  +++   ++     +I+++ D   +   L+VM  NG ++++++ 
Sbjct: 369 QLTDEGYVS---AFDLGKDKIIYQYDDLNQPADLFVMDLNGDNKRQLTH 414



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/298 (11%), Positives = 87/298 (29%), Gaps = 70/298 (23%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S       P++S + + + + +             +    + +++ +    I   + S
Sbjct: 84  LTSDPAADTSPKWSADGKHLYFLS--SRSGTNQLWRYSVASESVEQVSDVPVSIGTYKVS 141

Query: 267 SNGKRALISVQK------------------DEAMDIYSVD----------LQSNATE--- 295
           +   R + S                     +   +    D          L    +    
Sbjct: 142 AKNDRVVFSASVFPECETLVCTKEKSEAASNSKQEGKLYDKMFVRHWDHWLDGTQSRLFS 201

Query: 296 -RLTNTLFINISA--------------------SYSPDSSQIVFE---SDR----EGKEQ 327
            +L +  F + +                     + SPD   ++F    +D+         
Sbjct: 202 AKLGSKPFSDATPLSHSLNGNVPSSPFGGDEEYTISPDGKTVIFTLRIADKNEPTSTNFD 261

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQ 382
           LY +  +G     ++++  A    PV+SP G  +A+       F      + +      +
Sbjct: 262 LYEVSISGGKVNNLTKENLAWDTYPVFSPDGKKLAWLAMDRPGFEADRRQLHIRDLKSGK 321

Query: 383 ERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
              + +  +       +S +G+ +       G     ++S DL  +  + +    Y S
Sbjct: 322 TENVTKTWDRSFYGFKFSKNGQQVFLYGNHIGKN--VIWSFDLKTKQRSQLTDEGYVS 377


>gi|269125671|ref|YP_003299041.1| WD-40 repeat-containing protein [Thermomonospora curvata DSM 43183]
 gi|268310629|gb|ACY97003.1| WD-40 repeat protein [Thermomonospora curvata DSM 43183]
          Length = 344

 Score = 93.2 bits (230), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 88/250 (35%), Gaps = 22/250 (8%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +D     +          +    FSP+   +A A  D+     V L      +    +  
Sbjct: 3   IDYGKLRLHATLTGHRGWVGPIAFSPDGTILATAGEDE----TVKLWQVETGQLITTLTG 58

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSS 314
            R  + +  FS +G     +  +DE + ++  D+++      LT       S ++SPD +
Sbjct: 59  HRGCVFSVAFSPDGTTLA-TASRDETVKLW--DVKTGHLITTLTEHQGWVRSVAFSPDGA 115

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +       G     + Q+         ++ + + F  V+SP G ++A     G    + 
Sbjct: 116 VLA---SAGGDGTAKLWQAKTGHLITTLREHDWAVFWVVFSPDGTILATATADG---VVE 169

Query: 375 VMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           + +    Q  +   D +        +SP G  L  S     D   KL+ ++ +GR  T +
Sbjct: 170 LWEAKTGQL-ITTLDGHEDLVVEVAFSPDGSLLATSSH---DETVKLWQVE-SGRLITTL 224

Query: 432 NTPAYASDPQ 441
                 S   
Sbjct: 225 TGDEDFSFGA 234



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 96/293 (32%), Gaps = 37/293 (12%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           LWDVK                     H I+             F+     ++ +   G  
Sbjct: 86  LWDVKTG-------------------HLITTLTEHQGWVRSVAFSPDGAVLASAGGDGTA 126

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K    +      ++       D  +F   FSP+   +A AT D      V L + +  + 
Sbjct: 127 K----LWQAKTGHLITTLREHDWAVFWVVFSPDGTILATATADG----VVELWEAKTGQL 178

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-S 308
              +     +++   FS +G     +   DE + ++ V+        LT     +  A +
Sbjct: 179 ITTLDGHEDLVVEVAFSPDGSLLA-TSSHDETVKLWQVE-SGRLITTLTGDEDFSFGALA 236

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD + +   S+    + + +                       +SP G ++A T F  
Sbjct: 237 FSPDGTTLATASE---DKTVKLWDVKTGHLITTLTGHRHIIGSVAFSPDGTVLATTSFDA 293

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +   K       L   +  + +  +SP G +L  +     D+ +K++ +
Sbjct: 294 TV-KLWDAKTGHLITTLTEHEHTVGSVAFSPDGTTLATASD---DSTAKIWQV 342



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 108/294 (36%), Gaps = 33/294 (11%)

Query: 162 IYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           ++ ++TG +G +   I F  +     +     ++ +   +   +          +F   F
Sbjct: 10  LHATLTGHRG-WVGPIAFSPDGTILATAGEDETVKLWQVETGQLITTLTGHRGCVFSVAF 68

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   +A A+ D+     V L D +       +   +  + +  FS +G     S   D
Sbjct: 69  SPDGTTLATASRDE----TVKLWDVKTGHLITTLTEHQGWVRSVAFSPDGAVLA-SAGGD 123

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFESDREGKEQLYVMQSNGS 336
               ++    ++     +T     + +  +   SPD + +   +  +G  +L+  ++   
Sbjct: 124 GTAKLWQ--AKTGHL--ITTLREHDWAVFWVVFSPDGTILA-TATADGVVELW--EAKTG 176

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQA 394
                    E    +  +SP G L+A T    E   +  ++  G     L   ED +  A
Sbjct: 177 QLITTLDGHEDLVVEVAFSPDGSLLA-TSSHDETVKLWQVE-SGRLITTLTGDEDFSFGA 234

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSI-------DLNGRNETLINTPAYASDPQ 441
             +SP G +L  + +   D   KL+ +        L G    +I + A++ D  
Sbjct: 235 LAFSPDGTTLATASE---DKTVKLWDVKTGHLITTLTGHRH-IIGSVAFSPDGT 284


>gi|303247262|ref|ZP_07333536.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Desulfovibrio fructosovorans JJ]
 gi|302491421|gb|EFL51309.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Desulfovibrio fructosovorans JJ]
          Length = 716

 Score = 93.2 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 88/282 (31%), Gaps = 57/282 (20%)

Query: 218 RFSPNQQKVAYATYDD------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           R S + + VA+            D+     +        + + + R +   P FS +G R
Sbjct: 48  RLSADGRHVAFTVTRAVMDEQGGDLRSRVYVADAAKSLARPVTSEREVCEKPVFSPHGSR 107

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----- 326
               VQ D+  D   + L +  T RLT+     +  +++PD   +       G       
Sbjct: 108 LAYLVQTDDTTDAVVMSLGTGHTRRLTHGRGDVLDLAFTPDGKALAMTMTMNGGSGNRET 167

Query: 327 ----------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----- 365
                            L+++   G    R     +      V+SP G  IAF       
Sbjct: 168 NCDADVDVLDEEGGAAGLFLLPLAGQGALR-GLVTDRDVGGFVFSPDGGRIAFETTPPDA 226

Query: 366 ----------------FSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSR 408
                               +  I ++     +   +   ++ + +P +SP G+ L +  
Sbjct: 227 PPRGRRGNTVAGRAQPQDAAQTDIAMVDVKTGRVVPVAATADSETSPCFSPDGKWLAYVA 286

Query: 409 KKDGD---TGSKLYSIDLNGRNETLINTPAYASDPQ---WVG 444
            +      + +++  +  +G     +     A  P+   W  
Sbjct: 287 TRAPGFYYSAARVMIVPASGGAPRALAATPDAR-PEMLGWSA 327



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 52/309 (16%), Positives = 104/309 (33%), Gaps = 56/309 (18%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                  G +++ + V D   +  R +T  R+ +  +P FSP+  ++AY    D+    V
Sbjct: 63  AVMDEQGGDLRSRVYVADAAKSLARPVTSERE-VCEKPVFSPHGSRLAYLVQTDDTTDAV 121

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA------------------ 281
            +  +      +R+ + R  +L   F+ +GK   +++  +                    
Sbjct: 122 VM--SLGTGHTRRLTHGRGDVLDLAFTPDGKALAMTMTMNGGSGNRETNCDADVDVLDEE 179

Query: 282 ---MDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD--------REGK---- 325
                ++ + L    A   L     +     +SPD  +I FE+         R G     
Sbjct: 180 GGAAGLFLLPLAGQGALRGLVTDRDV-GGFVFSPDGGRIAFETTPPDAPPRGRRGNTVAG 238

Query: 326 ---------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----- 371
                      + ++         ++   + S   P +SP G  +A+       F     
Sbjct: 239 RAQPQDAAQTDIAMVDVKTGRVVPVAATAD-SETSPCFSPDGKWLAYVATRAPGFYYSAA 297

Query: 372 AIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + ++   G   R L    D+  +   WS  G ++ + R+ +G     L          T
Sbjct: 298 RVMIVPASGGAPRALAATPDARPEMLGWSADGGTI-YVREIEGTGAVVLALPVSGAAPRT 356

Query: 430 LINTPAYAS 438
           +  TP   S
Sbjct: 357 VSGTPRMVS 365



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 81/269 (30%), Gaps = 47/269 (17%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           EK  F+     ++  V +    +++ +    G   R      D +     F+P+ + +A 
Sbjct: 97  EKPVFSPHGSRLAYLVQTDDTTDAVVMSLGTGHTRRLTHGRGDVLDL--AFTPDGKALAM 154

Query: 229 ATYDDEDI--------LRVYLMDTRIDRAPKRIGNFRSM-----------ILAPRFSSNG 269
               +             V ++D     A   +                 +    FS +G
Sbjct: 155 TMTMNGGSGNRETNCDADVDVLDEEGGAAGLFLLPLAGQGALRGLVTDRDVGGFVFSPDG 214

Query: 270 KRALISVQKDEAM---------------------DIYSVDLQSNATERLTNTLFINISAS 308
            R        +A                      DI  VD+++     +  T     S  
Sbjct: 215 GRIAFETTPPDAPPRGRRGNTVAGRAQPQDAAQTDIAMVDVKTGRVVPVAATADSETSPC 274

Query: 309 YSPDSSQIVFESDRE-----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +SPD   + + + R         ++ ++ ++G   + ++   +A      WS  G  I  
Sbjct: 275 FSPDGKWLAYVATRAPGFYYSAARVMIVPASGGAPRALAATPDARPEMLGWSADGGTIYV 334

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            +  G    +  +   G+  R +     +
Sbjct: 335 REIEGTGAVVLALPVSGAAPRTVSGTPRM 363



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 48/139 (34%), Gaps = 11/139 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                +  + ++D     +  +  + D     P FSP+ + +AY           Y    
Sbjct: 242 PQDAAQTDIAMVDVKTGRVVPVAATADS-ETSPCFSPDGKWLAYVATRAPGF---YYSAA 297

Query: 245 RIDRAPKRIGNFRSMILAPR-------FSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+   P   G  R++   P        +S++G    +   +     + ++ +   A   +
Sbjct: 298 RVMIVPASGGAPRALAATPDARPEMLGWSADGGTIYVREIEGTGAVVLALPVSGAAPRTV 357

Query: 298 TNTLFINISASYSPDSSQI 316
           + T  +   A+ S   + +
Sbjct: 358 SGTPRMVSQAAVSASGNAL 376


>gi|145495202|ref|XP_001433594.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400713|emb|CAK66197.1| unnamed protein product [Paramecium tetraurelia]
          Length = 604

 Score = 93.2 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 56/374 (14%), Positives = 124/374 (33%), Gaps = 64/374 (17%)

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ-DWNSLGA--------QVLVTGRV 116
           + +V  +L  S  F  +          N +    F   W ++            +    V
Sbjct: 159 ANMVRCNLNES-TFQNVDISGM-----NLNGAQLFNCKWKNIKITEQNKKDTNNITVNSV 212

Query: 117 ------IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
                        +    RLWDVK  +Q             + +     D +        
Sbjct: 213 CFSADGTTLASGTIDQYIRLWDVKTGQQ-------------KALLDGHCDSVLSVCFSPD 259

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G           ++ SG    S+ + D +    +     +D + +   FS +   +A  +
Sbjct: 260 G----------TTLASGSGDKSIRLWDFNTMQQKAKLDCQDYV-YTICFSHDGTTLASGS 308

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D+     + L D + ++   ++   +  +    FS +G     S   D+++ ++  +++
Sbjct: 309 GDN----SIRLWDVKTEQLKAKLDGHQEYVYTVCFSPDGTTLA-SCSGDKSIRLW--NIK 361

Query: 291 SNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +   + +L        S  +SPD S++   S   G   + +       QK          
Sbjct: 362 TGQQKVKLDGHQEYVYSVCFSPDGSKLASGS---GDNTINLWDFQTGQQKDQLNGHTDYV 418

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFS 407
           +   +SP G ++A +       +I +      Q +  ++   S + +  +SP G +L   
Sbjct: 419 YSVCFSPDGTVLASSS---GDSSICLWDVRTKQLKAKLDGHSSGILSVCFSPDGTTLA-- 473

Query: 408 RKKDGDTGSKLYSI 421
                D   +L+ +
Sbjct: 474 -SGGFDCSIRLWDV 486


>gi|229819021|ref|YP_002880547.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Beutenbergia cavernae DSM 12333]
 gi|229564934|gb|ACQ78785.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Beutenbergia cavernae DSM 12333]
          Length = 610

 Score = 93.2 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 9/172 (5%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES 320
           A   S +G     S   D A  +    +      RL      ++ A ++SP   ++ F +
Sbjct: 16  AVALSPDGTLVAYSAHDDGAYSLLVRPVAGGEPRRLARFDDRSVRAVAWSPSGDRLAFSA 75

Query: 321 DREGKE--QLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIG 374
           DR+G E  Q++V+ ++G D  R++   D++    +  ++P G  + ++          + 
Sbjct: 76  DRDGDEQTQIFVVGADGGDPVRLTDRDDRQYGLAEQPFTPDGATLVYSGNDRDESASDVL 135

Query: 375 VMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           V     SQ R +     + AP   SP GR L+       ++ S +  +DL G
Sbjct: 136 VHDLATSQVRRIEMAPGITAPVDVSPDGR-LLTVLVLHSNSDSDVAVVDLAG 186



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 8/138 (5%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD + + + +  +G   L V    G + +R+++  + S     WSP GD +AF+     
Sbjct: 20  SPDGTLVAYSAHDDGAYSLLVRPVAGGEPRRLARFDDRSVRAVAWSPSGDRLAFSADRDG 79

Query: 370 --KFAIGVMKKDGSQERLLVED-----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +  I V+  DG     L +         + P ++P G +L++S     ++ S +   D
Sbjct: 80  DEQTQIFVVGADGGDPVRLTDRDDRQYGLAEQP-FTPDGATLVYSGNDRDESASDVLVHD 138

Query: 423 LNGRNETLINTPAYASDP 440
           L       I      + P
Sbjct: 139 LATSQVRRIEMAPGITAP 156



 Score = 65.8 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 79/248 (31%), Gaps = 11/248 (4%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           HT  D + +    +    +     V+ S        SL V    G   R L    D+ + 
Sbjct: 2   HTFDDFVPRRRFQDAVALSPDGTLVAYSAHDDGA-YSLLVRPVAGGEPRRLARFDDRSVR 60

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRA 272
              +SP+  ++A++   D D      +       P R+ +            F+ +G   
Sbjct: 61  AVAWSPSGDRLAFSADRDGDEQTQIFVVGADGGDPVRLTDRDDRQYGLAEQPFTPDGATL 120

Query: 273 LISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDREGKEQLY 329
           + S    +  A D+   DL ++   R+     I      SPD   + V          + 
Sbjct: 121 VYSGNDRDESASDVLVHDLATSQVRRIEMAPGITAPVDVSPDGRLLTVLVLHSNSDSDVA 180

Query: 330 VMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERL 385
           V+   G     +   S +    +    W               +F A+     DG  E +
Sbjct: 181 VVDLAGGADAVRTVASHEGAVRHLPGPWLADSSGFWLRTDRDAEFLALATCTLDGDVEVV 240

Query: 386 LVEDSNLQ 393
              D++++
Sbjct: 241 HAPDADVE 248


>gi|114775410|ref|ZP_01450978.1| translocation protein TolB precursor [Mariprofundus ferrooxydans
           PV-1]
 gi|114553521|gb|EAU55902.1| translocation protein TolB precursor [Mariprofundus ferrooxydans
           PV-1]
          Length = 363

 Score = 93.2 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 58/139 (41%), Gaps = 11/139 (7%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D   +Y++D +          F   I     S +G++ +   +     D++  ++     
Sbjct: 211 DPPSLYILDRKSGDLTMIPNAFDGTI-----SPDGRKVIFVRETKGNYDLWMQEINGGEL 265

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASY 349
            +LT++ F +   ++SPD S+++F S+R+      +  +Y+M  N +   R++    A  
Sbjct: 266 VQLTDSPFGDFEPAWSPDGSRVLFVSNRDSAGAVTRTSIYMMDLNTNSITRLTNASRAVD 325

Query: 350 FDPVWSPQGDLIAFTKFSG 368
             P W    D + F     
Sbjct: 326 GGPAWM-DKDTVVFHSNRD 343



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 11/123 (8%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             LY++     D   I      + FD   SP G  + F + +   + + + + +G +   
Sbjct: 213 PSLYILDRKSGDLTMI-----PNAFDGTISPDGRKVIFVRETKGNYDLWMQEINGGELVQ 267

Query: 386 LVED-SNLQAPTWSPSGRSLIFSRKKDGD---TGSKLYSIDLNGRNETLINTPAYASD-- 439
           L +       P WSP G  ++F   +D     T + +Y +DLN  + T +   + A D  
Sbjct: 268 LTDSPFGDFEPAWSPDGSRVLFVSNRDSAGAVTRTSIYMMDLNTNSITRLTNASRAVDGG 327

Query: 440 PQW 442
           P W
Sbjct: 328 PAW 330



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 62/138 (44%), Gaps = 14/138 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           SL ++DR   ++  +  + D        SP+ +KV +   + +    +++ +       +
Sbjct: 214 SLYILDRKSGDLTMIPNAFDG-----TISPDGRKVIFVR-ETKGNYDLWMQEINGGELVQ 267

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEA-----MDIYSVDLQSNATERLTN-TLFINI 305
            + +       P +S +G R L    +D A       IY +DL +N+  RLTN +  ++ 
Sbjct: 268 -LTDSPFGDFEPAWSPDGSRVLFVSNRDSAGAVTRTSIYMMDLNTNSITRLTNASRAVDG 326

Query: 306 SASYSPDSSQIVFESDRE 323
             ++  D   +VF S+R+
Sbjct: 327 GPAWM-DKDTVVFHSNRD 343



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 45/108 (41%), Gaps = 10/108 (9%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           +++FV E+  +      L + + +G  +  LT S     FEP +SP+  +V + +  D  
Sbjct: 242 KVIFVRETKGN----YDLWMQEINGGELVQLTDSPFG-DFEPAWSPDGSRVLFVSNRDSA 296

Query: 236 IL----RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                  +Y+MD   +   +     R++   P +  +    +    +D
Sbjct: 297 GAVTRTSIYMMDLNTNSITRLTNASRAVDGGPAWM-DKDTVVFHSNRD 343



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 6/74 (8%)

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TL 430
           ++ ++ +       L    N    T SP GR +IF R+  G     L+  ++NG     L
Sbjct: 214 SLYILDRKSGD---LTMIPNAFDGTISPDGRKVIFVRETKG--NYDLWMQEINGGELVQL 268

Query: 431 INTPAYASDPQWVG 444
            ++P    +P W  
Sbjct: 269 TDSPFGDFEPAWSP 282


>gi|145525875|ref|XP_001448754.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124416309|emb|CAK81357.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2171

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 101/280 (36%), Gaps = 24/280 (8%)

Query: 162  IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            I +    E   ++  I   S ++ SG   N + + D      +    +    +    FSP
Sbjct: 1758 IIEQNKFENVIYSISISPNSFTIASGGDDNQIYLWDIKTGQQKSKLCNHTGWVRSVCFSP 1817

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            +   +A       D   + L D + ++   ++    S + +  FS NG+    S   D+ 
Sbjct: 1818 DGTILA----SGGDDQSICLWDVQTEQQQFKLIGHTSQVYSVCFSPNGQTLA-SGSNDKT 1872

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            +  + V       ++ + +  I  S  +SPD + + F S     E + ++      QK  
Sbjct: 1873 IRFWDVKTGKKKFKQHSFSSAI-YSVQFSPDGTTLAFGSL---DECICLLDVKTGQQKSR 1928

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSP 399
                E +     +SP G  +A          I +      Q++ +++       +  +SP
Sbjct: 1929 LYGHEYAVKSVCFSPDGTTLASGSDDKT---IRLWDTKTGQQKFILKGHANAVYSLCFSP 1985

Query: 400  SGRSLIFSRKKDGDTGSKLYSI-------DLNGRNETLIN 432
             G +L        D   +L+ I        L+G  + ++ 
Sbjct: 1986 DGSTLASGSD---DMSIRLWDIKTGLQKQKLDGHKKEVLQ 2022



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 91/240 (37%), Gaps = 21/240 (8%)

Query: 202  NIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            NIR +  ++ + +++    SPN   +A       D  ++YL D +  +   ++ N    +
Sbjct: 1755 NIRIIEQNKFENVIYSISISPNSFTIA----SGGDDNQIYLWDIKTGQQKSKLCNHTGWV 1810

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFE 319
             +  FS +G          +   I   D+Q+   + +L        S  +SP+   +   
Sbjct: 1811 RSVCFSPDGTILA---SGGDDQSICLWDVQTEQQQFKLIGHTSQVYSVCFSPNGQTLASG 1867

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            S+    + +         +K       ++ +   +SP G  +AF         I ++   
Sbjct: 1868 SN---DKTIRFWDVKTGKKKFKQHSFSSAIYSVQFSPDGTTLAFGSLDE---CICLLDVK 1921

Query: 380  GSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              Q+  RL   +  +++  +SP G +L        D   +L+     G+ + ++   A A
Sbjct: 1922 TGQQKSRLYGHEYAVKSVCFSPDGTTLASGSD---DKTIRLWDTK-TGQQKFILKGHANA 1977



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 85/228 (37%), Gaps = 36/228 (15%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++  G D   +   LWDV+  +Q            ++ I HT    +Y       G  
Sbjct: 1819 GTILASGGDDQSIC--LWDVQTEQQ-----------QFKLIGHT--SQVYSVCFSPNG-- 1861

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    +++ SG    ++   D      ++   S    ++  +FSP+   +A+ + D+
Sbjct: 1862 --------QTLASGSNDKTIRFWDVKTGKKKFKQHSFSSAIYSVQFSPDGTTLAFGSLDE 1913

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + L+D +  +   R+      + +  FS +G     S   D+ + ++  D ++  
Sbjct: 1914 ----CICLLDVKTGQQKSRLYGHEYAVKSVCFSPDGTTLA-SGSDDKTIRLW--DTKTGQ 1966

Query: 294  TERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             + +       + S  +SPD S +   SD      + +       QK+
Sbjct: 1967 QKFILKGHANAVYSLCFSPDGSTLASGSD---DMSIRLWDIKTGLQKQ 2011


>gi|332299577|ref|YP_004441498.1| prolyl oligopeptidase [Porphyromonas asaccharolytica DSM 20707]
 gi|332176640|gb|AEE12330.1| prolyl oligopeptidase [Porphyromonas asaccharolytica DSM 20707]
          Length = 665

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 95/291 (32%), Gaps = 64/291 (21%)

Query: 218 RFSPNQQKVAY-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             +P+ ++V Y     +  D+     +YL+++      +           PR+S +GK+ 
Sbjct: 25  ALAPDGKQVIYNVSQPSIKDNNSRTSIYLINSDGSGRTELTAPSAGSEYTPRWSRDGKQI 84

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM- 331
                 D+ M +++  L      +LT      +   +SPD + +++  D + +  +  + 
Sbjct: 85  YFMRGTDQGMQLFARTLSDGVERQLTAIDGGIVDYLFSPDETTLLYVQDIKARPVVTDVY 144

Query: 332 -QSNGSDQK----------------------------RISQDKEASYFDP---------- 352
              + +D +                             I++  +    +P          
Sbjct: 145 PDLDKADARIIEDLMYKHWDEWVSTMPHPFIAKVTAQPITKGLDLLEGEPYEAPMRPFNG 204

Query: 353 ----VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWS 398
                +SP G+LIA+                 I +      +   + E        P +S
Sbjct: 205 IEDIAFSPDGNLIAYACRKKTGLEYSLSTNSDIYLYNVSTGETTNVSEGIMGYDTHPVFS 264

Query: 399 PSGRSLIFSRKKDGDTGSKL---YSIDLNGRNETLINTP--AYASDPQWVG 444
           P GRSLI+   +     S L   Y  DL  +    +        ++P W  
Sbjct: 265 PDGRSLIWIGMEHDGYESDLQVMYLYDLAKKQYRPLTADFEYNIANPTWSA 315



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 103/313 (32%), Gaps = 65/313 (20%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            S+     + S+ +++ DG+    LT       + PR+S + +++ +    D+ +     
Sbjct: 40  PSIKDNNSRTSIYLINSDGSGRTELTAPSAGSEYTPRWSRDGKQIYFMRGTDQGMQ--LF 97

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-------------------------- 275
             T  D   +++      I+   FS +    L                            
Sbjct: 98  ARTLSDGVERQLTAIDGGIVDYLFSPDETTLLYVQDIKARPVVTDVYPDLDKADARIIED 157

Query: 276 -VQKDEAMDIYSVD---LQSNATERLTNTLF-INISA--------------SYSPDSSQI 316
            + K     + ++    +     + +T  L  +                  ++SPD + I
Sbjct: 158 LMYKHWDEWVSTMPHPFIAKVTAQPITKGLDLLEGEPYEAPMRPFNGIEDIAFSPDGNLI 217

Query: 317 VFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +                 +Y+   +  +   +S+        PV+SP G  + +     
Sbjct: 218 AYACRKKTGLEYSLSTNSDIYLYNVSTGETTNVSEGIMGYDTHPVFSPDGRSLIWIGMEH 277

Query: 369 EKFA-----IGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +      + +      Q R L  D   N+  PTWS   +++ F   +  +  + LYS 
Sbjct: 278 DGYESDLQVMYLYDLAKKQYRPLTADFEYNIANPTWSADSKTIYFITCR--EALTHLYSY 335

Query: 422 DL-NGRNETLINT 433
            L NG+ + + + 
Sbjct: 336 QLANGKIKQITDG 348



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/323 (13%), Positives = 104/323 (32%), Gaps = 37/323 (11%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D KQI   +   +    +  A T+SD + + +T   G     +    E+ +  +      
Sbjct: 80  DGKQIYFMR--GTDQGMQLFARTLSDGVERQLTAIDGGIVDYLFSPDETTLLYVQDIKAR 137

Query: 195 VM------DRDGANIRYLT-----PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +      D D A+ R +         + +   P          +        +   L  
Sbjct: 138 PVVTDVYPDLDKADARIIEDLMYKHWDEWVSTMP--------HPFIAKVTAQPITKGLDL 189

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATE 295
              +     +  F  +     FS +G     + +K            DIY  ++ +  T 
Sbjct: 190 LEGEPYEAPMRPFNGIEDI-AFSPDGNLIAYACRKKTGLEYSLSTNSDIYLYNVSTGETT 248

Query: 296 RLTNT-LFINISASYSPDSSQIVFES-DREGKEQ----LYVMQSNGSDQKRISQDKEASY 349
            ++   +  +    +SPD   +++   + +G E     +Y+        + ++ D E + 
Sbjct: 249 NVSEGIMGYDTHPVFSPDGRSLIWIGMEHDGYESDLQVMYLYDLAKKQYRPLTADFEYNI 308

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            +P WS     I F         +   +    + + + +        +  +   +  + +
Sbjct: 309 ANPTWSADSKTIYFITCREALTHLYSYQLANGKIKQITDGQYDYT-GFDMNAEGVCVASR 367

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           +     ++LY ++L     T + 
Sbjct: 368 QSMTYPTELYMVNLKNGKATALT 390


>gi|254409737|ref|ZP_05023518.1| hypothetical protein MC7420_7370 [Microcoleus chthonoplastes PCC
           7420]
 gi|196183734|gb|EDX78717.1| hypothetical protein MC7420_7370 [Microcoleus chthonoplastes PCC
           7420]
          Length = 915

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 64/355 (18%), Positives = 121/355 (34%), Gaps = 45/355 (12%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
            SD    +S     + I +         W   GA++     +     D   V F      
Sbjct: 346 HSDRVREVSFSPDGEMIASASRDGTVNLWTKDGAKL---HSINAHDDDIYDVTFS----P 398

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-----VSGII 189
           D + I       +   W +          + +    G  N+ ++ VS S       S   
Sbjct: 399 DSQIIASASQDGTVKLWSREG--------ERLNTLSG-HNAPVISVSFSADGQQLASASA 449

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             ++ +   +G  ++ LT  + ++     FS + Q +A A+ D      V L        
Sbjct: 450 DQTVKLWTIEGEELQTLTGHQGEVTSV-SFSGDGQLIATASQDK----TVKLWTIE-GEE 503

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            + + + +  I    FS + +R   +  KD  + ++  +        LT          +
Sbjct: 504 LQTLTDHKDGIWQVTFSPDSQRLA-TSSKDRTIKLW--NRDGTLLNTLTGHSSQVFGVDF 560

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   +   SD      + + + +    K + Q        P +SP  DLIA       
Sbjct: 561 SPDGQTLASASD---DRTVRLWKLDNPSVKTLPQSG----ISPSFSPNEDLIAIAS---- 609

Query: 370 KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              I +   DG +   L    N  ++ ++SP G ++  +     D   KL+ +D+
Sbjct: 610 GMDITLWSPDGKKLNTLSGHKNWVESVSFSPDGETIASASD---DQTVKLWRLDV 661



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 78/208 (37%), Gaps = 18/208 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           ++      + I++  +FSPN + +A  + D      V L   R     + +   + M+L 
Sbjct: 669 LQKTLNGHEGIVWTVQFSPNGEYLASGSQDQ----TVKLWK-RNGELLQTLEGHQGMVLN 723

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNA----TERLTNTLFINISASYSPDSSQIVF 318
             FS +G+    S   D  + ++ +D ++       + +        S S+SPD   I  
Sbjct: 724 VSFSPDGQTIA-SASTDGTVKLWRLDGETRHGASLLQTIEGHDAAVGSVSFSPDGQIIAT 782

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD    +Q   + +      +         +   + P G  +A     G    I  +  
Sbjct: 783 ASD----DQTVKLWTTEGKLLQTLAGHRDRVYRVTFRPDGQFLATASLDGTV-KIWTV-- 835

Query: 379 DGSQERLLV-EDSNLQAPTWSPSGRSLI 405
           DG++   L    + +   ++S  G++L 
Sbjct: 836 DGTEVVTLKGHQAGVNHLSFSTDGKTLA 863



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 53/278 (19%), Positives = 109/278 (39%), Gaps = 29/278 (10%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES--VVSGIIKN 191
            D +Q+       +   W     TI  +  Q++TG +G+  + + F  +   + +     
Sbjct: 439 ADGQQLASASADQTVKLW-----TIEGEELQTLTGHQGE-VTSVSFSGDGQLIATASQDK 492

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++ +   +G  ++ LT  +D I ++  FSP+ Q++A ++ D      + L + R      
Sbjct: 493 TVKLWTIEGEELQTLTDHKDGI-WQVTFSPDSQRLATSSKDR----TIKLWN-RDGTLLN 546

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +    S +    FS +G+    S   D  + ++ +D  S   + L  +    IS S+SP
Sbjct: 547 TLTGHSSQVFGVDFSPDGQTLA-SASDDRTVRLWKLDNPS--VKTLPQSG---ISPSFSP 600

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-- 369
           +   I   S  +    + +   +G     +S  K        +SP G+ IA         
Sbjct: 601 NEDLIAIASGMD----ITLWSPDGKKLNTLSGHKNW-VESVSFSPDGETIASASDDQTVK 655

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +  +  +     Q+ L   +  +    +SP+G  L 
Sbjct: 656 LWRLDVETLHATSLQKTLNGHEGIVWTVQFSPNGEYLA 693



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 86/242 (35%), Gaps = 24/242 (9%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N           +    FSP+ +++A A+ D      + L         K +      + 
Sbjct: 297 NQSNQLDGHTNKVRSVSFSPDGERIASASSDH----TIKLWQPD-GSLIKTLEGHSDRVR 351

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              FS +G+    S  +D  +++++ D        +          ++SPDS  I   S 
Sbjct: 352 EVSFSPDGEMIA-SASRDGTVNLWTKD--GAKLHSINAHDDDIYDVTFSPDSQIIASASQ 408

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +G  +L+     G     +S    A      +S  G  +A +  + +   +  +  +G 
Sbjct: 409 -DGTVKLW--SREGERLNTLS-GHNAPVISVSFSADGQQLA-SASADQTVKLWTI--EGE 461

Query: 382 QERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + + L      + + ++S  G+ +  + +   D   KL++I   G     + T     D 
Sbjct: 462 ELQTLTGHQGEVTSVSFSGDGQLIATASQ---DKTVKLWTI--EGEE---LQTLTDHKDG 513

Query: 441 QW 442
            W
Sbjct: 514 IW 515



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/216 (19%), Positives = 74/216 (34%), Gaps = 21/216 (9%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
              I    L          ++    + + +  FS +G+R   S   D  + ++  D   +
Sbjct: 282 HSTISTALLQSVYWVNQSNQLDGHTNKVRSVSFSPDGERIA-SASSDHTIKLWQPD--GS 338

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             + L          S+SPD   I   S R+G   L+    +G+    I    +   +D 
Sbjct: 339 LIKTLEGHSDRVREVSFSPDGEMIASAS-RDGTVNLWT--KDGAKLHSI-NAHDDDIYDV 394

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSR 408
            +SP   +IA     G       +K    +   L   S   AP    ++S  G+ L    
Sbjct: 395 TFSPDSQIIASASQDG------TVKLWSREGERLNTLSGHNAPVISVSFSADGQQLA--- 445

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               D   KL++I+     +TL       +   + G
Sbjct: 446 SASADQTVKLWTIEGE-ELQTLTGHQGEVTSVSFSG 480



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 84/257 (32%), Gaps = 27/257 (10%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK---DRKQ 138
           +S     + I +       + W  L  + L    + K        E  +W V+   + + 
Sbjct: 636 VSFSPDGETIASASDDQTVKLWR-LDVETLHATSLQKTLNGH---EGIVWTVQFSPNGEY 691

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMD 197
           +       +   W++       ++ Q++ G +G   +       +++ S     ++ +  
Sbjct: 692 LASGSQDQTVKLWKRNG-----ELLQTLEGHQGMVLNVSFSPDGQTIASASTDGTVKLWR 746

Query: 198 RDGANIR-----YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            DG               D  +    FSP+ Q +A A+ D      V L  T   +  + 
Sbjct: 747 LDGETRHGASLLQTIEGHDAAVGSVSFSPDGQIIATASDDQ----TVKLWTTE-GKLLQT 801

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +   R  +    F  +G+    +   D  + I++VD        L          S+S D
Sbjct: 802 LAGHRDRVYRVTFRPDGQFLA-TASLDGTVKIWTVD--GTEVVTLKGHQAGVNHLSFSTD 858

Query: 313 SSQIVFESDREGKEQLY 329
              +   +D      L+
Sbjct: 859 GKTLA-STDENYTMILW 874


>gi|116625320|ref|YP_827476.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228482|gb|ABJ87191.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 860

 Score = 92.8 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 87/241 (36%), Gaps = 7/241 (2%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG  +  L   DR G NI       D+     R SP+  + A +  D      ++ ++  
Sbjct: 567 SGSDRYQLTWCDRKG-NILSTVGQPDRYAAL-RISPDGGRAAVSLIDSAGNRDIWQLEFA 624

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +     R  +    +S +G+R    +     +   S    +     L     + I
Sbjct: 625 RGVLGRLTIGGRGFV--AVWSPDGQRLAYHMASGPVLFERSTSGANEGETVLQAKNAVYI 682

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFT 364
           +  +SPD S +++ +     +    +     D+K +   K A +     +SP G  IA+T
Sbjct: 683 N-DWSPDGSSLLYTAMAPDSQNDLWILPRTGDRKPVPFLKSAFNESHGQFSPDGKWIAYT 741

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                +  + V  +   + +  V +     P W   G+ L + R  DG+  +       N
Sbjct: 742 SDEPGESEVFVQGRTAGEFKWQVSNGGGSFPRWRRDGKELYY-RALDGNLMATPVRASAN 800

Query: 425 G 425
           G
Sbjct: 801 G 801



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 60/194 (30%), Gaps = 17/194 (8%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            +      S +G+           + ++   L S     L  T        +SPDS  I 
Sbjct: 319 GIGGGSAISPDGRAIAFVASSSGMVKLWLRPLASLTASELPGTEGAQY-PFWSPDSRSIG 377

Query: 318 FES-------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           F S       +  G   + +  +   + +  + + + +      S  G L       G  
Sbjct: 378 FFSGNKLKRIEVSGGPPVVIADAP--NARGGTWNAQGTIVFGSLSAVGSLKQVAASGGSP 435

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             +G     G    ++      + P + P GR  +++ +      S +Y   L+ R E  
Sbjct: 436 VPLGKANPGGEDVLII------RWPQFLPDGRRFLYAAQSLKSESSGIYMSSLD-RPEEK 488

Query: 431 INTPAYASDPQWVG 444
           I      S   +  
Sbjct: 489 IRLMGDLSAAAYAP 502



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 95/299 (31%), Gaps = 74/299 (24%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDT--RIDRAPKRIGNFRSMILAPRFSSNGK 270
           I+  P+F P+ ++  YA    +       M +  R +   + +G+  +   AP     GK
Sbjct: 450 IIRWPQFLPDGRRFLYAAQSLKSESSGIYMSSLDRPEEKIRLMGDLSAAAYAP---PRGK 506

Query: 271 R--ALISVQKD-----------EAMDIYSVDLQSNATERLTNTLFINISA---------- 307
               L+ V+ D             +   ++ +        T+  FIN S           
Sbjct: 507 HPGYLLWVRADTLMAQPFDAGHGRLSGDAMPVPGGKMANATS--FINASPFSASNEGKVL 564

Query: 308 --------------------------------SYSPDSSQIVFE-SDREGKEQLYVMQSN 334
                                             SPD  +      D  G   ++ ++  
Sbjct: 565 FNSGSDRYQLTWCDRKGNILSTVGQPDRYAALRISPDGGRAAVSLIDSAGNRDIWQLEFA 624

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                R++       F  VWSP G  +A+   SG              E +L   + +  
Sbjct: 625 RGVLGRLTIGGRG--FVAVWSPDGQRLAYHMASGPVLFERSTSGANEGETVLQAKNAVYI 682

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI--------NTPAYASDPQWVGF 445
             WSP G SL+++     D+ + L+ +   G  + +         +   ++ D +W+ +
Sbjct: 683 NDWSPDGSSLLYTAMAP-DSQNDLWILPRTGDRKPVPFLKSAFNESHGQFSPDGKWIAY 740



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 68/198 (34%), Gaps = 17/198 (8%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV----EFRL-WDVKDR 136
           IS D  +  ++  DS      W    A+  V GR+   G+  + V      RL + +   
Sbjct: 598 ISPDGGRAAVSLIDSAGNRDIWQLEFARG-VLGRLTIGGRGFVAVWSPDGQRLAYHMASG 656

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
             +  +    +     +      + +Y        D++     +  + ++   +N L ++
Sbjct: 657 PVLFERSTSGANEG--ETVLQAKNAVYI------NDWSPDGSSLLYTAMAPDSQNDLWIL 708

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
            R G                 +FSP+ + +AY + D+     V++          ++ N 
Sbjct: 709 PRTGDRKPVPFLKSAFNESHGQFSPDGKWIAYTS-DEPGESEVFVQGRTAGEFKWQVSNG 767

Query: 257 RSMILAPRFSSNGKRALI 274
                 PR+  +GK    
Sbjct: 768 GG--SFPRWRRDGKELYY 783


>gi|226226759|ref|YP_002760865.1| prolyl oligopeptidase family protein [Gemmatimonas aurantiaca T-27]
 gi|226089950|dbj|BAH38395.1| prolyl oligopeptidase family protein [Gemmatimonas aurantiaca T-27]
          Length = 748

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 90/240 (37%), Gaps = 54/240 (22%)

Query: 259 MILAPRFSSNGKRALISVQKDEA------MDIYSVDLQSN--ATERLTNTLF-INISASY 309
                  S +GK+ L ++   +        DIY VD+     +T++LT T         +
Sbjct: 30  NAGGAEVSPDGKQVLYTLSTPDWKEATSQSDIYLVDVDRGLASTKQLTFTTAKNETQPRW 89

Query: 310 SPDSSQIVFESDREG------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +P     VF S+RE       ++QL++M+++G + +RI+  ++       ++  G  + +
Sbjct: 90  APGGGWFVFSSNRESAAGQANQQQLFLMRADGGEARRITNARDG-VSTFEFTRDGQSLIY 148

Query: 364 TKFSGEKFAIGVMKKDG----------SQERLLVEDSNLQAPTWSPSGRSLIFSR--KKD 411
                 +  +  +              S  +L    + +     +P  R + F+     D
Sbjct: 149 RSGKSNEEQLYALPVASLAKGTPVDSLSPAQLTKHATGVGTWRIAPDSRRIYFTTADSVD 208

Query: 412 GD------------------TGSKLYSIDLNGRNETLINTPAY--------ASDPQWVGF 445
           GD                    + L++ D+  R+ET +   A         + D +W+GF
Sbjct: 209 GDEKARRDKKFTVDVRNAETPVAALWAFDIASRSETRLTKDATQAVSGFTISPDGRWIGF 268



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 57/307 (18%), Positives = 117/307 (38%), Gaps = 56/307 (18%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            ES      +  L +M  DG   R +T +RD +     F+ + Q + Y +    +  ++Y
Sbjct: 102 RESAAGQANQQQLFLMRADGGEARRITNARDGVSTF-EFTRDGQSLIYRS-GKSNEEQLY 159

Query: 241 LMDTRI--------DRAPKRIGNFRSMILAPRFSSNGKRALISV--QKDEAMD------- 283
            +              +P ++    + +   R + + +R   +     D           
Sbjct: 160 ALPVASLAKGTPVDSLSPAQLTKHATGVGTWRIAPDSRRIYFTTADSVDGDEKARRDKKF 219

Query: 284 -------------IYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES---DREGKE 326
                        +++ D+ S +  RLT      +S  + SPD   I F +   DR  + 
Sbjct: 220 TVDVRNAETPVAALWAFDIASRSETRLTKDATQAVSGFTISPDGRWIGFNATPNDRYKRN 279

Query: 327 --------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------TKFSGEKFA 372
                    +Y++ +  +  +R++ ++E S     +SP    IAF      T+F+ +   
Sbjct: 280 VTEEGIYADVYLLDTQDNSVERLTNNEENSESALSFSPDSKTIAFSASDDMTRFNMKNRR 339

Query: 373 IGVMKKD--GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNE 428
           + +      G   R L + D +     W+P GR++ FS        ++L+++D+ +G+  
Sbjct: 340 VYLRDAAAKGQAFRKLGDYDGDHSVNFWAPDGRTIYFST--GAKATTQLFALDVASGKTT 397

Query: 429 TLINTPA 435
            L N   
Sbjct: 398 QLTNVDG 404



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 107/304 (35%), Gaps = 54/304 (17%)

Query: 190 KNSLCVMDRD--GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT--- 244
           ++ + ++D D   A+ + LT +  +   +PR++P      +++  +    +         
Sbjct: 58  QSDIYLVDVDRGLASTKQLTFTTAKNETQPRWAPGGGWFVFSSNRESAAGQANQQQLFLM 117

Query: 245 -RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---------DLQSNAT 294
                  +RI N R  +    F+ +G+  +    K     +Y++          + S + 
Sbjct: 118 RADGGEARRITNARDGVSTFEFTRDGQSLIYRSGKSNEEQLYALPVASLAKGTPVDSLSP 177

Query: 295 ERLTNTLFINISASYSPDSSQIVFE----------SDREGKEQ------------LYVMQ 332
            +LT       +   +PDS +I F           + R+ K              L+   
Sbjct: 178 AQLTKHATGVGTWRIAPDSRRIYFTTADSVDGDEKARRDKKFTVDVRNAETPVAALWAFD 237

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIGVMKK-DG 380
                + R+++D   +      SP G  I F     +++            + ++   D 
Sbjct: 238 IASRSETRLTKDATQAVSGFTISPDGRWIGFNATPNDRYKRNVTEEGIYADVYLLDTQDN 297

Query: 381 SQERLLVEDSNLQAP-TWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLINTPA 435
           S ERL   + N ++  ++SP  +++ FS   D         ++Y  D   + +       
Sbjct: 298 SVERLTNNEENSESALSFSPDSKTIAFSASDDMTRFNMKNRRVYLRDAAAKGQAFRKLGD 357

Query: 436 YASD 439
           Y  D
Sbjct: 358 YDGD 361



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 88/275 (32%), Gaps = 56/275 (20%)

Query: 220 SPNQQKVAYA-----TYDDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRA 272
           SP+ ++V Y        +      +YL+D     A  +   F +      PR++  G   
Sbjct: 37  SPDGKQVLYTLSTPDWKEATSQSDIYLVDVDRGLASTKQLTFTTAKNETQPRWAPGGGWF 96

Query: 273 LISVQKDEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           + S  ++ A        ++ +        R+TN      +  ++ D   +++ S +  +E
Sbjct: 97  VFSSNRESAAGQANQQQLFLMRADGGEARRITNARDGVSTFEFTRDGQSLIYRSGKSNEE 156

Query: 327 QLYVM---------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----------FS 367
           QLY +           +     ++++           +P    I FT             
Sbjct: 157 QLYALPVASLAKGTPVDSLSPAQLTKHATGVGTW-RIAPDSRRIYFTTADSVDGDEKARR 215

Query: 368 GEKF------------AIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGD 413
            +KF            A+         E  L +D+   +   T SP GR + F+   +  
Sbjct: 216 DKKFTVDVRNAETPVAALWAFDIASRSETRLTKDATQAVSGFTISPDGRWIGFNATPNDR 275

Query: 414 TG---------SKLYSIDLNGRNETLINTPAYASD 439
                      + +Y +D    +   +      S+
Sbjct: 276 YKRNVTEEGIYADVYLLDTQDNSVERLTNNEENSE 310


>gi|322371180|ref|ZP_08045732.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
 gi|320549170|gb|EFW90832.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
          Length = 606

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 53/255 (20%), Positives = 101/255 (39%), Gaps = 28/255 (10%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAP-RFSS 267
           R  +   P  SP+ ++VA   YD      ++++D       +   G     +  P  ++ 
Sbjct: 12  RLPVFSRPAASPDGERVA-VYYDSTGRNELHVIDVGTGEMRQVSDGEVPRNVSQPFGWAP 70

Query: 268 NGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESDR 322
           +G+R    +    DE  DI+ +DL  NA   + ++      +I      D  ++++ S  
Sbjct: 71  DGERIYYHLDDAGDEQHDIWEIDLDGNAAPVVEDSGQCILNDI------DDGKLLYVSSA 124

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAIGVMKKD 379
           +G+  LY         ++++ + E   F   + P GD + +     +      + V   D
Sbjct: 125 DGQMNLYRYDRETETSEQLA-EYELGVFHASYGPDGDRMVYMSNESDDLTNMDVYVADAD 183

Query: 380 GSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY-----SIDLNGRNETLI 431
           GS  R L   ++ +      WS  G  L+ S      T S +Y     S++  G  E + 
Sbjct: 184 GSNPRNLELGIDGNETHFEDWSADGTKLLVSDNAADKTRSGVYDFESQSVEWFGDGEYVE 243

Query: 432 NTPAYASDPQWVGFM 446
           +  A+  D    GF+
Sbjct: 244 DGVAFLPDG--SGFL 256



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 104/268 (38%), Gaps = 14/268 (5%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSR-DQILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTR 245
             +N L V+D     +R ++     + + +P  ++P+ +++ Y   D  D  +  + +  
Sbjct: 35  TGRNELHVIDVGTGEMRQVSDGEVPRNVSQPFGWAPDGERIYYHLDDAGDE-QHDIWEID 93

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           +D     +       +      +GK  L     D  M++Y  D ++  +E+L        
Sbjct: 94  LDGNAAPVVEDSGQCILNDID-DGK-LLYVSSADGQMNLYRYDRETETSEQLAEYELGVF 151

Query: 306 SASYSPDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLI 361
            ASY PD  ++V+ S+         +YV  ++GS+ + +    + +      WS  G  +
Sbjct: 152 HASYGPDGDRMVYMSNESDDLTNMDVYVADADGSNPRNLELGIDGNETHFEDWSADGTKL 211

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +  + +K   GV   +        +   ++    + P G   +  RK+D      +Y 
Sbjct: 212 LVSDNAADKTRSGVYDFESQSVEWFGDGEYVEDGVAFLPDGSGFLALRKRDAAVVPLVY- 270

Query: 421 IDLNGRNETLINTPAYASDPQW--VGFM 446
            D +G    L      AS P +    F+
Sbjct: 271 -DFDGTATELDLPTGVASFPLYSDSAFL 297



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 66/206 (32%), Gaps = 11/206 (5%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI-LFEPRFSPNQQKVAYA 229
           G    R++++S      +    + V D DG+N R L    D        +S +  K+  +
Sbjct: 156 GPDGDRMVYMSNE-SDDLTNMDVYVADADGSNPRNLELGIDGNETHFEDWSADGTKLLVS 214

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
               +       +     ++ +  G+   +     F  +G   L   ++D A+     D 
Sbjct: 215 DNAADKTRSG--VYDFESQSVEWFGDGEYVEDGVAFLPDGSGFLALRKRDAAVVPLVYDF 272

Query: 290 QSNATERLTNTLFINISASYSP-----DSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
              ATE L     +     YS      D   +V  +    +  L V      + + + + 
Sbjct: 273 DGTATE-LDLPTGVASFPLYSDSAFLGDGRVLVEGTTPTQRPALLVYDLETGETETLLEP 331

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEK 370
                    ++   + I F    G  
Sbjct: 332 VYGDIDPESFA-DAEYITFESHDGTD 356


>gi|297158604|gb|ADI08316.1| putative WD-40 repeat protein [Streptomyces bingchenggensis BCW-1]
          Length = 1189

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 91/311 (29%), Gaps = 44/311 (14%)

Query: 108 AQVLVTG--RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
            + L  G                RLWDV   +            + R +A   S D    
Sbjct: 657 VEALAFGPDGRTLASGSSFDDTVRLWDVSAGRP--RTTLTGEAGNIRSLA--FSPD---- 708

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
                            ++  G     + + D      R       +++    FS + + 
Sbjct: 709 ---------------GRTLAGGSSDGPVRLWDAATGRTRDTLTGHTRVVGLVAFSADGRT 753

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A ++YD        L D       +  G+    + A   S +G+    S   D    + 
Sbjct: 754 LATSSYDG----TARLWDVAKGTTRRTFGDHTGRVWAGALSPDGRTLATS---DGRQTVR 806

Query: 286 SVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             D  +      LT      +S ++SPD   +       G ++   +      Q R++  
Sbjct: 807 LWDTSTGRVRTTLTGHTDYVLSIAFSPDGRALA----TGGLDRTVRLWDLARGQTRLTFG 862

Query: 345 KEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPS 400
                 +    SP G  +A T   G      +      + R +    +    ++  ++P 
Sbjct: 863 GHTDGVWAASLSPDGRTLATTDRGGPA---RLWDTRTGESRTVPVSGDPGEAESVAFAPD 919

Query: 401 GRSLIFSRKKD 411
           GR+L       
Sbjct: 920 GRTLAIGTSDG 930



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 88/266 (33%), Gaps = 22/266 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++ +G     + + +      R         +    F P+ + +A  +  D+    V L
Sbjct: 625 RTLATGGADGRVRLWEAATGEPRDTLAGHTGRVEALAFGPDGRTLASGSSFDD---TVRL 681

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
            D    R    +      I +  FS +G+        D  + ++  D  +  T   LT  
Sbjct: 682 WDVSAGRPRTTLTGEAGNIRSLAFSPDGRTLA-GGSSDGPVRLW--DAATGRTRDTLTGH 738

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             +    ++S D   +   S  +G  +L+         +R   D     +    SP G  
Sbjct: 739 TRVVGLVAFSADGRTLA-TSSYDGTARLW--DVAKGTTRRTFGDHTGRVWAGALSPDGRT 795

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKL 418
           +A    S  +  + +      + R  +        +  +SP GR+L        D   +L
Sbjct: 796 LA---TSDGRQTVRLWDTSTGRVRTTLTGHTDYVLSIAFSPDGRALA---TGGLDRTVRL 849

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           + +    R +T +    + +D  W  
Sbjct: 850 WDL---ARGQTRLTFGGH-TDGVWAA 871



 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 56/321 (17%), Positives = 105/321 (32%), Gaps = 39/321 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            GR +     R  V  RLWD    +                  HT  D +        G  
Sbjct: 793  GRTLATSDGRQTV--RLWDTSTGRVRTTLT-----------GHT--DYVLSIAFSPDG-- 835

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     ++ +G +  ++ + D      R         ++    SP+ + +A  T D 
Sbjct: 836  --------RALATGGLDRTVRLWDLARGQTRLTFGGHTDGVWAASLSPDGRTLA--TTDR 885

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                R++   T   R    +        +  F+ +G+   I    D  +  +  DL+S  
Sbjct: 886  GGPARLWDTRTGESRTV-PVSGDPGEAESVAFAPDGRTLAIGTS-DGRVQFH--DLRSGE 941

Query: 294  T-ERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              ER  + +  N+   ++SPD   +   SD    E + V  +     +            
Sbjct: 942  IIERYADHIRHNVDVLAFSPDGRLLAVGSDEA--EDVQVWDTASGRVRTTLAASRLGVNA 999

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +SP    +A +        + +      + R+ ++ S   A  +SP GR+L       
Sbjct: 1000 LAFSPDSRTLAISGIRTAD-RVQLWDLKRGRPRITLDTSRTGAVAFSPDGRTLA---TGG 1055

Query: 412  GDTGSKLYSIDLNGRNETLIN 432
             D  ++L++    GR   L  
Sbjct: 1056 SDGTARLWNTADGGRRAALTG 1076



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 96/308 (31%), Gaps = 23/308 (7%)

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           +  + +  +  K+     + ++    RK     +D +        G           ++ 
Sbjct: 537 LAVQAYRTRSTKESTNSLYAAAALPLRKRLSGHADVVRSVAFSPDG----------RTLA 586

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ + +      R     R   +    FSP+ + +A          RV L +  
Sbjct: 587 TGGADGAVRLWEATTGESRSTLTRRAGQVDALAFSPDGRTLA----TGGADGRVRLWEAA 642

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +      + A  F  +G+        D+ + ++ V         LT       
Sbjct: 643 TGEPRDTLAGHTGRVEALAFGPDGRTLASGSSFDDTVRLWDVSA-GRPRTTLTGEAGNIR 701

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++SPD   +      +G  +L+   +     +              +S  G  +A + 
Sbjct: 702 SLAFSPDGRTLA-GGSSDGPVRLW--DAATGRTRDTLTGHTRVVGLVAFSADGRTLATSS 758

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           + G    +  + K  ++         + A   SP GR+L      DG    +L+     G
Sbjct: 759 YDGTA-RLWDVAKGTTRRTFGDHTGRVWAGALSPDGRTLA---TSDGRQTVRLWDTS-TG 813

Query: 426 RNETLINT 433
           R  T +  
Sbjct: 814 RVRTTLTG 821



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 67/353 (18%), Positives = 124/353 (35%), Gaps = 49/353 (13%)

Query: 109  QVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
              +++     +G       L    RLWD+   +      F          A ++S D   
Sbjct: 824  DYVLSIAFSPDGRALATGGLDRTVRLWDLARGQ--TRLTFGGHTDGV--WAASLSPDGRT 879

Query: 165  SITGEKGD----FNSRILFVSESVVSGIIK-----------NSLCVMDRDGANIRYLTPS 209
              T ++G     +++R        VSG               +L +   DG    +   S
Sbjct: 880  LATTDRGGPARLWDTRTGESRTVPVSGDPGEAESVAFAPDGRTLAIGTSDGRVQFHDLRS 939

Query: 210  RDQILFEP----------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
             + I               FSP+ + +A  + + ED   V + DT   R    +   R  
Sbjct: 940  GEIIERYADHIRHNVDVLAFSPDGRLLAVGSDEAED---VQVWDTASGRVRTTLAASRLG 996

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + A  FS + +   IS  +  A  +   DL+     R+T       + ++SPD   +   
Sbjct: 997  VNALAFSPDSRTLAISGIRT-ADRVQLWDLKRGRP-RITLDTSRTGAVAFSPDGRTLA-T 1053

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               +G  +L+   +    ++        +     +SP G  +A   + G    + V    
Sbjct: 1054 GGSDGTARLW--NTADGGRRAALTGHIDAATSVAFSPDGRSLAVGSYEGG---VRVWDVA 1108

Query: 380  GSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            GS+ R  L      ++A  +S  GR+L        D  ++L+++ L G  E +
Sbjct: 1109 GSRMRVALTGHTGAVKAVAFSRDGRALATGSL---DGTARLWNVFLPGPQEAI 1158



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 56/338 (16%), Positives = 112/338 (33%), Gaps = 32/338 (9%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQ---IIGKKFFSS----PASWRKIAHTISD------DIY 163
                        RLWD    +    + G           A  R +A +  D      D+ 
Sbjct: 710  RTLAGGSSDGPVRLWDAATGRTRDTLTGHTRVVGLVAFSADGRTLATSSYDGTARLWDVA 769

Query: 164  QSITGEK-GDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            +  T    GD   R+   + S       +   + ++ + D     +R         +   
Sbjct: 770  KGTTRRTFGDHTGRVWAGALSPDGRTLATSDGRQTVRLWDTSTGRVRTTLTGHTDYVLSI 829

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ + +A    D      V L D    +     G     + A   S +G+    +  
Sbjct: 830  AFSPDGRALATGGLDR----TVRLWDLARGQTRLTFGGHTDGVWAASLSPDGRTLA-TTD 884

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            +     ++      + T  ++       S +++PD   +      +G+ Q + ++ +G  
Sbjct: 885  RGGPARLWDTRTGESRTVPVSGDPGEAESVAFAPDGRTLA-IGTSDGRVQFHDLR-SGEI 942

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAP 395
             +R +     +     +SP G L+A      E   +        + R  +  S   + A 
Sbjct: 943  IERYADHIRHNVDVLAFSPDGRLLAVGSDEAEDVQVW--DTASGRVRTTLAASRLGVNAL 1000

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             +SP  R+L  S  +  D   +L+ +   GR    ++T
Sbjct: 1001 AFSPDSRTLAISGIRTADRV-QLWDLKR-GRPRITLDT 1036



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 96/306 (31%), Gaps = 54/306 (17%)

Query: 37   KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
             V  +       S+AF        +G     V   DL RS                  + 
Sbjct: 901  TVPVSGDPGEAESVAFAPDGRTLAIGTSDGRVQFHDL-RSG-----------------EI 942

Query: 97   IPRFQDWNSLGAQVLVT---GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
            I R+ D       VL     GR++  G D    + ++WD    +        ++ A+ R 
Sbjct: 943  IERYADHIRHNVDVLAFSPDGRLLAVGSDEAE-DVQVWDTASGRV------RTTLAASRL 995

Query: 154  IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
              + ++             F+     ++ S +    +  L  + R G     L  SR   
Sbjct: 996  GVNALA-------------FSPDSRTLAISGIRTADRVQLWDLKR-GRPRITLDTSRTGA 1041

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +    FSP+ + +A             L +T        +        +  FS +G+   
Sbjct: 1042 V---AFSPDGRTLA----TGGSDGTARLWNTADGGRRAALTGHIDAATSVAFSPDGRSLA 1094

Query: 274  ISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +    +  + ++  D+  +     LT       + ++S D   +      +G  +L+ + 
Sbjct: 1095 V-GSYEGGVRVW--DVAGSRMRVALTGHTGAVKAVAFSRDGRALA-TGSLDGTARLWNVF 1150

Query: 333  SNGSDQ 338
              G  +
Sbjct: 1151 LPGPQE 1156


>gi|320531536|ref|ZP_08032486.1| WD domain, G-beta repeat protein [Actinomyces sp. oral taxon 171
           str. F0337]
 gi|320136238|gb|EFW28236.1| WD domain, G-beta repeat protein [Actinomyces sp. oral taxon 171
           str. F0337]
          Length = 1271

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 49/329 (14%), Positives = 109/329 (33%), Gaps = 40/329 (12%)

Query: 129 RLWDVKDRKQII--------GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
           R+WDV    +++        G+     P         I     + +TG     +SR +  
Sbjct: 175 RIWDVTTGTELLRVGPMAFVGRGATMGPDGRPTHVGPI-----EPMTGLSWSPDSRRIIT 229

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +       + ++       G  +  L     + +    +SP+  ++     DD      +
Sbjct: 230 AFDSAEPRVWDA-----ATGEEVLSLHGRERRWVSVVSWSPDGSRII---TDDISGTTAH 281

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D         +        A  +S +G R   +   D+ + ++  D  +    +L   
Sbjct: 282 IWDAATGEELLSLRGHTQWACALAWSPDGTRVA-TGSHDDTVRVW--DAATGQ-TQLVLG 337

Query: 301 LFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              ++   S+SPD +++   +   G     V  +   + +    +      + VWSP G 
Sbjct: 338 AGNSVETVSWSPDGTRLTIGAKTGGN---RVWDATTGEPRLTVDNGARELSEVVWSPDGT 394

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A + +   +  I +    G   + L    +      WSP    ++      GD  + +
Sbjct: 395 RLATSSYLSPRVLI-LDASTGEVVQALTAGEDDVNDIAWSPDSERIL---TGLGDDRAAI 450

Query: 419 YSIDLNGRNETLINTPAYA---SDPQWVG 444
           +      R E L+    ++   +   W  
Sbjct: 451 WDA---ARGERLLTLEGHSDMITSVAWSP 476



 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 43/338 (12%), Positives = 105/338 (31%), Gaps = 38/338 (11%)

Query: 129 RLWDVKDRKQIIG-----KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE- 182
           R+WD    ++++      +++ S  +     +  I+DDI  +            L     
Sbjct: 237 RVWDAATGEEVLSLHGRERRWVSVVSWSPDGSRIITDDISGTTAHIWDAATGEELLSLRG 296

Query: 183 ---------------SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                           V +G   +++ V D      + +  + + +     +SP+  ++ 
Sbjct: 297 HTQWACALAWSPDGTRVATGSHDDTVRVWDAATGQTQLVLGAGNSVETV-SWSPDGTRLT 355

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                  +     + D         + N    +    +S +G R   S     +  +  +
Sbjct: 356 IGAKTGGNR----VWDATTGEPRLTVDNGARELSEVVWSPDGTRLATSSYL--SPRVLIL 409

Query: 288 DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D  +    + LT         ++SPDS +I+      G ++  +  +   ++    +   
Sbjct: 410 DASTGEVVQALTAGEDDVNDIAWSPDSERIL---TGLGDDRAAIWDAARGERLLTLEGHS 466

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                  WSP G  +      G      +      +       + ++   W+  G  ++ 
Sbjct: 467 DMITSVAWSPNGQRVLTGSQDGTA---RIWDATTGEVIHTYTGNWVRDVVWTQGGPRVV- 522

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                 D  + ++ +  +G   TL +  A      W  
Sbjct: 523 --TGSADGAAHVWDVITSGELVTLRDDAAMVRSYAWSP 558



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 90/284 (31%), Gaps = 41/284 (14%)

Query: 186 SGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           +    +S+ V D   GA++  L      +     +SP+  ++  +  D        + D 
Sbjct: 82  TAAEDHSVRVWDATTGADLLTLGVGGSGVGGAVAWSPDSTRILTSFDDA----SARIWDA 137

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--------- 295
              +  + +      + A  +S +G R   +   D    I+ V   +             
Sbjct: 138 SSGQVVRTLSGHTEHLTAVSWSPDGTRVA-TASDDGTARIWDVTTGTELLRVGPMAFVGR 196

Query: 296 --------RLTNTLFIN--ISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQ 343
                   R T+   I      S+SPDS +I   F+S      +  V  +   ++     
Sbjct: 197 GATMGPDGRPTHVGPIEPMTGLSWSPDSRRIITAFDS-----AEPRVWDAATGEEVLSLH 251

Query: 344 DKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPS 400
            +E  +   V WSP G  I     SG    I        +E L +      A    WSP 
Sbjct: 252 GRERRWVSVVSWSPDGSRIITDDISGTTAHIW--DAATGEELLSLRGHTQWACALAWSPD 309

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           G  +      D     +++     G+ + ++          W  
Sbjct: 310 GTRVATGSHDD---TVRVWDA-ATGQTQLVLGAGNSVETVSWSP 349



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 86/263 (32%), Gaps = 37/263 (14%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L       L+   +SP+  ++   ++D        + D         +      I A  
Sbjct: 17  SLYAGHFDALWGVAWSPDGTRLLSGSHDG----TARVWDANRGTELFALAGPSLSISAVA 72

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDR 322
           +S +G R L +  +D ++ ++  D  + A           +  + ++SPDS++I+  S  
Sbjct: 73  WSPDGTRLL-TAAEDHSVRVW--DATTGADLLTLGVGGSGVGGAVAWSPDSTRIL-TSFD 128

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +   +++   ++     R             WSP G  +A     G    I  +      
Sbjct: 129 DASARIW--DASSGQVVRTLSGHTEHLTAVSWSPDGTRVATASDDGTA-RIWDVTTGTEL 185

Query: 383 ERL----LVEDSNLQAP----------------TWSPSGRSLIFSRKKDGDTGSKLYS-- 420
            R+     V       P                +WSP  R +I +            +  
Sbjct: 186 LRVGPMAFVGRGATMGPDGRPTHVGPIEPMTGLSWSPDSRRIITAFDSAEPRVWDAATGE 245

Query: 421 --IDLNGRNETLINTPAYASDPQ 441
             + L+GR    ++  +++ D  
Sbjct: 246 EVLSLHGRERRWVSVVSWSPDGS 268



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 56/378 (14%), Positives = 118/378 (31%), Gaps = 55/378 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ---DWNSLGAQVL 111
           +VS+       S +++ D+  S     I   +  +++ +     ++     W+  G    
Sbjct: 257 WVSVVSWSPDGSRIITDDI--SGTTAHIWDAATGEELLSLRGHTQWACALAWSPDG---- 310

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQ--IIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
                 +          R+WD    +   ++G        SW      +      + TG 
Sbjct: 311 -----TRVATGSHDDTVRVWDAATGQTQLVLGAGNSVETVSWSPDGTRL---TIGAKTGG 362

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN--------------------IRYLTPS 209
              +++       +V +G  + S  V   DG                      +     +
Sbjct: 363 NRVWDATTGEPRLTVDNGARELSEVVWSPDGTRLATSSYLSPRVLILDASTGEVVQALTA 422

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            +  + +  +SP+ +++     DD    R  + D         +     MI +  +S NG
Sbjct: 423 GEDDVNDIAWSPDSERILTGLGDD----RAAIWDAARGERLLTLEGHSDMITSVAWSPNG 478

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +R L +  +D    I+  D  +      T T        ++    ++V     +G   ++
Sbjct: 479 QRVL-TGSQDGTARIW--DATTGEVIH-TYTGNWVRDVVWTQGGPRVV-TGSADGAAHVW 533

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                 S +    +D  A      WSP G  +      G    + V  +   +  L +  
Sbjct: 534 --DVITSGELVTLRDDAAMVRSYAWSPDGTRVLAGFDDG---VVRVWDEVSGKIVLSLAG 588

Query: 390 SNLQA--PTWSPSGRSLI 405
                    WSP G  ++
Sbjct: 589 HRFGVTDAQWSPDGMRIL 606



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 81/242 (33%), Gaps = 22/242 (9%)

Query: 161 DIYQSITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           ++ Q++T  + D N       SE +++G+  +   + D               ++    +
Sbjct: 415 EVVQALTAGEDDVNDIAWSPDSERILTGLGDDRAAIWDAARGERLLTLEGHSDMITSVAW 474

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN Q+V   + D     R++   T             + +    ++  G R +++   D
Sbjct: 475 SPNGQRVLTGSQD--GTARIWDATTGEVIH----TYTGNWVRDVVWTQGGPR-VVTGSAD 527

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            A  ++ V + S     L +   +  S ++SPD ++ V     +G  +++          
Sbjct: 528 GAAHVWDV-ITSGELVTLRDDAAMVRSYAWSPDGTR-VLAGFDDGVVRVW--DEVSGKIV 583

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                      D  WSP G  I      G    + +      +   L          + P
Sbjct: 584 LSLAGHRFGVTDAQWSPDGMRILTGSEDGT---VRLWDATTGEMTGLFL-------CFLP 633

Query: 400 SG 401
            G
Sbjct: 634 DG 635


>gi|254409388|ref|ZP_05023169.1| YD repeat protein [Microcoleus chthonoplastes PCC 7420]
 gi|196183385|gb|EDX78368.1| YD repeat protein [Microcoleus chthonoplastes PCC 7420]
          Length = 1162

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 96/242 (39%), Gaps = 20/242 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +     ++ + D  G   R L      +     FSP+ Q +A A+ D   I R++ +   
Sbjct: 910  TASSDGTVRLWDIQGKLQRRLPNHSGGVAQV-AFSPDGQLIATASSD--GIARLWDIQ-- 964

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 + +   +  + +  FS +G +   +   D  + ++  DLQ N  + L        
Sbjct: 965  -GNLLQDLIGHQGWVRSLAFSPDGTQIA-TASSDRTVRLW--DLQGNLRQELKGHQGWVK 1020

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S ++SP+   I   +  +G  +L+   ++G+  K ++Q          +SP G  IA   
Sbjct: 1021 SVAFSPNGDYIA-TASIDGIVRLW--DTDGNLVKELNQHPSG-ITHIAFSPDGTRIATAS 1076

Query: 366  FSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            F G      +    G+  + +      + + T+SP G  +  +     D  ++++ ++  
Sbjct: 1077 FEG---IARLWDLQGNLVQEIKGHQGAVVSVTFSPDGTQIATASS---DGTARIWQVEGL 1130

Query: 425  GR 426
            G 
Sbjct: 1131 GE 1132



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 77/224 (34%), Gaps = 25/224 (11%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                     +    FSP+ Q +  A+ D    L         +R  K I  F+    +  
Sbjct: 846  QPLQGHQDGVTHVTFSPDGQLLGTASSDGTARL--------WNRQGKSILEFKGHQGSVT 897

Query: 265  ---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
               F  + +    +   D  + ++  D+Q     RL N        ++SPD   I   + 
Sbjct: 898  DITFRPDQQMIA-TASSDGTVRLW--DIQGKLQRRLPNHSGGVAQVAFSPDGQLIA-TAS 953

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             +G  +L+     G+  + +    +       +SP G  IA          + +    G+
Sbjct: 954  SDGIARLW--DIQGNLLQDLI-GHQGWVRSLAFSPDGTQIATASSDRT---VRLWDLQGN 1007

Query: 382  QERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              + L      +++  +SP+G  +  +     D   +L+  D N
Sbjct: 1008 LRQELKGHQGWVKSVAFSPNGDYIATASI---DGIVRLWDTDGN 1048



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 84/224 (37%), Gaps = 17/224 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++V+  +   + + +R G  I  L P     +     S + Q++A A+ D    +R++ 
Sbjct: 580 QTIVTASLDGMILMWNRQGKPIGQL-PGHPARVTSIAISQDGQRIASASID--GTVRLWH 636

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
              R +   + +   +  + +  FS +G+    +   D    ++  D+Q N  +  T   
Sbjct: 637 ---RQENGMQELPKQQGWVRSVAFSPDGELIA-TASSDHTARLW--DIQGNLLQEFTGHE 690

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 ++SPD   I   +  +   +L+ +Q    +  +  +  +       +SP G  I
Sbjct: 691 DEVTRVAFSPDGQFIA-TASSDHTARLWDIQ---GNLLQEFKGHQGWVRSVAFSPDGKFI 746

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSL 404
           A            +    G+  +        +    +SP G+ L
Sbjct: 747 ATASSDHTA---RLWDIQGNLLQEFKGHQGRVTQVMFSPDGQFL 787



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 84/236 (35%), Gaps = 30/236 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALI 274
            FS + Q +  A+ D         M    +R  K IG        + +   S +G+R   
Sbjct: 574 AFSRDGQTIVTASLDG--------MILMWNRQGKPIGQLPGHPARVTSIAISQDGQRIA- 624

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S   D  + ++    Q N  + L        S ++SPD   I   +  +   +L+     
Sbjct: 625 SASIDGTVRLW--HRQENGMQELPKQQGWVRSVAFSPDGELIA-TASSDHTARLW--DIQ 679

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQ 393
           G+  +  +   E       +SP G  IA            +    G+  +        ++
Sbjct: 680 GNLLQEFT-GHEDEVTRVAFSPDGQFIATASSDHTA---RLWDIQGNLLQEFKGHQGWVR 735

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-----GRNETLINTPAYASDPQWVG 444
           +  +SP G+ +  +     D  ++L+ I  N       ++  +    ++ D Q++G
Sbjct: 736 SVAFSPDGKFIATASS---DHTARLWDIQGNLLQEFKGHQGRVTQVMFSPDGQFLG 788



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 96/290 (33%), Gaps = 34/290 (11%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSL 193
           D ++I       +   W +  + +     Q +  ++G   S         + +    ++ 
Sbjct: 619 DGQRIASASIDGTVRLWHRQENGM-----QELPKQQGWVRSVAFSPDGELIATASSDHTA 673

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            + D  G N+       +  +    FSP+ Q +A A+ D        L D + +   +  
Sbjct: 674 RLWDIQG-NLLQEFTGHEDEVTRVAFSPDGQFIATASSDH----TARLWDIQGNLLQEFK 728

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           G  +  + +  FS +GK    +   D    ++  D+Q N  +             +SPD 
Sbjct: 729 G-HQGWVRSVAFSPDGKFIA-TASSDHTARLW--DIQGNLLQEFKGHQGRVTQVMFSPDG 784

Query: 314 SQIVF--ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
               F   +  +G  +L+  Q    +  +  +  +    D   S  G +I      G   
Sbjct: 785 Q---FLGTASMDGTARLWDWQ---GNVVQNLKGHQGLVTDLAMSRDGQIIVTATSDG--- 835

Query: 372 AIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLY 419
              +           ++         T+SP G+ L        D  ++L+
Sbjct: 836 ---IAHLWTRSHNQPLQGHQDGVTHVTFSPDGQLL---GTASSDGTARLW 879



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 86/252 (34%), Gaps = 21/252 (8%)

Query: 89   QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
            Q I    S    + W+    Q  +  R+        +V F      D + I         
Sbjct: 906  QMIATASSDGTVRLWD---IQGKLQRRLPNHSGGVAQVAFS----PDGQLIATASSDGIA 958

Query: 149  ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              W    + + D I          F+         + +     ++ + D  G N+R    
Sbjct: 959  RLWDIQGNLLQDLIGHQGWVRSLAFSPD----GTQIATASSDRTVRLWDLQG-NLRQELK 1013

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                 +    FSPN   +A A+ D      V L DT      K +    S I    FS +
Sbjct: 1014 GHQGWVKSVAFSPNGDYIATASIDG----IVRLWDTD-GNLVKELNQHPSGITHIAFSPD 1068

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            G R   +   +    ++  DLQ N  + +       +S ++SPD +QI   +  +G  ++
Sbjct: 1069 GTRIA-TASFEGIARLW--DLQGNLVQEIKGHQGAVVSVTFSPDGTQIA-TASSDGTARI 1124

Query: 329  YVMQSNGSDQKR 340
            + ++  G    R
Sbjct: 1125 WQVEGLGELLSR 1136



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 69/185 (37%), Gaps = 14/185 (7%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L +   +   +   + +  + +  FS +G+  + +   D  + ++  + Q     +L   
Sbjct: 551 LQEILNNIQERNQLHHQGSVESLAFSRDGQTIV-TASLDGMILMW--NRQGKPIGQLPGH 607

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S + S D  +I   S  +G  +L+  Q NG  +      ++       +SP G+L
Sbjct: 608 PARVTSIAISQDGQRIASASI-DGTVRLWHRQENGMQE---LPKQQGWVRSVAFSPDGEL 663

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           IA            +    G+  +      + +    +SP G+ +  +     D  ++L+
Sbjct: 664 IATASSDHTA---RLWDIQGNLLQEFTGHEDEVTRVAFSPDGQFIATASS---DHTARLW 717

Query: 420 SIDLN 424
            I  N
Sbjct: 718 DIQGN 722


>gi|160885691|ref|ZP_02066694.1| hypothetical protein BACOVA_03695 [Bacteroides ovatus ATCC 8483]
 gi|156108504|gb|EDO10249.1| hypothetical protein BACOVA_03695 [Bacteroides ovatus ATCC 8483]
          Length = 700

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 109/322 (33%), Gaps = 64/322 (19%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           +++ F+S    +    + L  M+ DG+  + LT     I      SP+ +K+ + +    
Sbjct: 115 TKLAFLS----NDNGSSQLYEMNPDGSGRKQLTNYDGDIEGY-SISPDGKKLLFISQVKT 169

Query: 232 ---------DDEDILRVYLMDTRIDRAPKRIG--------NFRSMILA---------PRF 265
                    D      + + D       + +         +F    ++         P  
Sbjct: 170 KESTADKYPDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVDILNDEPYE 229

Query: 266 SS--------------NGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLF 302
           S                  +   + +K            DIY  DL +  TE +T     
Sbjct: 230 SPMKPWGGIEQLAWNMTSDKVAYTCRKKTGLEYAISTNSDIYVYDLNTKKTENITEENKG 289

Query: 303 INISASYSPDSSQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + +  YSPD   I ++S +R+G      +L++M     +++ +S+  E++    VW   
Sbjct: 290 YDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFVWGAD 349

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             +I FT     +  I  +       + +           +  G  LI +++     G +
Sbjct: 350 AKVIYFTGVWHGESQIYALDLANDSVKAITSGMYDYEGV-ALFGDKLI-AKRHSMSMGDE 407

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           +YS+ L+G    L        D
Sbjct: 408 IYSVALDGSTTQLTQENKQIYD 429



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 94/280 (33%), Gaps = 67/280 (23%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISV------QKD 279
           T D     +V +  + I    KR+          I     S +GK+   +V      +  
Sbjct: 21  TKDAGKTDQVLIEKSDIKIEGKRMTPEALWAMGRIGGFAVSPDGKKIAYTVAYYSVPENK 80

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +++ ++   +  +++T T +     ++    +++ F S+  G  QLY M  +GS +K
Sbjct: 81  SNREVFVMNADGSENQQITRTPYQENEVTWIKGGTKLAFLSNDNGSSQLYEMNPDGSGRK 140

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK----------------------------- 370
           +++ + +        SP G  + F      K                             
Sbjct: 141 QLT-NYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTDLMYKHWDEW 199

Query: 371 ----FAIGVMKKDGSQERLLVEDSNLQAPTWSPS--------------GRSLIFS-RKKD 411
                   V   DG+    +V+  N + P  SP                  + ++ RKK 
Sbjct: 200 VTTAPHPFVADFDGNGISNIVDILNDE-PYESPMKPWGGIEQLAWNMTSDKVAYTCRKKT 258

Query: 412 G-----DTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           G      T S +Y  DLN +    I      Y ++PQ+  
Sbjct: 259 GLEYAISTNSDIYVYDLNTKKTENITEENKGYDTNPQYSP 298



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 51/321 (15%), Positives = 109/321 (33%), Gaps = 69/321 (21%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG+  + +T +  Q      +     K+A+ + D+       +
Sbjct: 74  YSVPENKSNREVFVMNADGSENQQITRTPYQENEV-TWIKGGTKLAFLSNDNGSSQLYEM 132

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------------- 278
                 R  K++ N+   I     S +GK+ L   Q                        
Sbjct: 133 NPDGSGR--KQLTNYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTD 190

Query: 279 ----------DEAMDIYSVDLQSNATERLTNTLFINISA--------------SYSPDSS 314
                       A   +  D   N    + + L  N                 +++  S 
Sbjct: 191 LMYKHWDEWVTTAPHPFVADFDGNGISNIVDIL--NDEPYESPMKPWGGIEQLAWNMTSD 248

Query: 315 QIVFE-SDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++ +    + G          +YV   N    + I+++ +    +P +SP G  IA+   
Sbjct: 249 KVAYTCRKKTGLEYAISTNSDIYVYDLNTKKTENITEENKGYDTNPQYSPDGKYIAWQSM 308

Query: 367 SGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             + +      + +M  +  ++R + +  +SN+ A  W    + + F+    G+  S++Y
Sbjct: 309 ERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFVWGADAKVIYFTGVWHGE--SQIY 366

Query: 420 SIDLNGRNETLINTPAYASDP 440
           ++DL   +   I +  Y  + 
Sbjct: 367 ALDLANDSVKAITSGMYDYEG 387



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 84/276 (30%), Gaps = 61/276 (22%)

Query: 218 RFSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+ +K+AY     +  +    R   +        ++I           +   G +  
Sbjct: 59  AVSPDGKKIAYTVAYYSVPENKSNREVFVMNADGSENQQITRTPYQENEVTWIKGGTKLA 118

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-------- 325
                + +  +Y ++   +  ++LTN        S SPD  +++F S  + K        
Sbjct: 119 FLSNDNGSSQLYEMNPDGSGRKQLTNYDGDIEGYSISPDGKKLLFISQVKTKESTADKYP 178

Query: 326 -------------------------EQLYVMQSNGSDQKRISQ-----------DKEASY 349
                                       +V   +G+    I                   
Sbjct: 179 DLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVDILNDEPYESPMKPWGGI 238

Query: 350 FDPVWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSP 399
               W+   D +A+T                I V   +  +   + E+       P +SP
Sbjct: 239 EQLAWNMTSDKVAYTCRKKTGLEYAISTNSDIYVYDLNTKKTENITEENKGYDTNPQYSP 298

Query: 400 SGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLIN 432
            G+ + + S ++DG     ++L+ ++L    +  ++
Sbjct: 299 DGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVS 334


>gi|126172463|ref|YP_001048612.1| peptidase S9 prolyl oligopeptidase [Shewanella baltica OS155]
 gi|125995668|gb|ABN59743.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella baltica OS155]
          Length = 698

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/327 (16%), Positives = 112/327 (34%), Gaps = 66/327 (20%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I+           K S  +   DG + R +T  +   + EP FSP+ + +A+ +  +ED
Sbjct: 73  HIIAPVTEYDLKADKGSTQLWHFDGKHNRAITA-KGLRVSEPVFSPDGKTLAFVSQRNED 131

Query: 236 -ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-------------------- 274
              ++YL+        +R+ +  + + + ++   GK                        
Sbjct: 132 EASQIYLLPMDGPGEAQRLTDIPTGVNSIKW--VGKHLYFISNIFPNQSWEEMKTQLTTD 189

Query: 275 --------------------SVQKDEAMDIYSVDLQSNATERLTNTLF------INISAS 308
                                + +     ++ +  +    E +T             SAS
Sbjct: 190 TDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHELPRSDQSSAS 249

Query: 309 Y--SPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           Y  SP+   I F +     +      +++    G+  + ++ D +A   +P +SP G  +
Sbjct: 250 YDVSPNERWIAFNAYGSENKVDPKIDIFLATIGGNKAENLTADNQAPDLNPSFSPNGKTL 309

Query: 362 AFTKFSGEKF-----AIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDT 414
           AFT+     F      + ++  D  +   L  D +  +   +W+P  +   F    +   
Sbjct: 310 AFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTPDNKG--FYATVEDAA 367

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQ 441
            +++YSID        I      S P 
Sbjct: 368 TNRIYSIDAKNGKVKAITEATDFSQPA 394



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 98/295 (33%), Gaps = 72/295 (24%)

Query: 217 PRFSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  SP  + +      Y    D+   +++  D    +  + I      +  P FS +GK 
Sbjct: 65  PIVSPTGEHIIAPVTEYDLKADKGSTQLWHFD---GKHNRAITAKGLRVSEPVFSPDGKT 121

Query: 272 ALISVQK--DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-------- 320
                Q+  DEA  IY + +      +RLT+      S  +      + F S        
Sbjct: 122 LAFVSQRNEDEASQIYLLPMDGPGEAQRLTDIPTGVNSIKWV--GKHLYFISNIFPNQSW 179

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQ----- 343
                                           D   +  ++ + + G + + I+Q     
Sbjct: 180 EEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHE 239

Query: 344 --DKEASYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLVEDSN--LQA 394
               + S      SP    IAF  +  E        I +    G++   L  D+      
Sbjct: 240 LPRSDQSSASYDVSPNERWIAFNAYGSENKVDPKIDIFLATIGGNKAENLTADNQAPDLN 299

Query: 395 PTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
           P++SP+G++L F+R+K        S+L  +D++ R  T + +      S   W  
Sbjct: 300 PSFSPNGKTLAFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTP 354



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 84/267 (31%), Gaps = 17/267 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            + F+S    +   +     +  D  N             +     ++++ A+       
Sbjct: 166 HLYFISNIFPNQSWEEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAK 225

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-----QKDEAMDIYSVDLQ 290
              V  +         R         +   S N +    +      + D  +DI+   + 
Sbjct: 226 GGNVENITQPAGHELPR---SDQSSASYDVSPNERWIAFNAYGSENKVDPKIDIFLATIG 282

Query: 291 SNATERLT-NTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKRISQD 344
            N  E LT +    +++ S+SP+   + F   +         +L ++  +      ++ D
Sbjct: 283 GNKAENLTADNQAPDLNPSFSPNGKTLAFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSD 342

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S     W+P       T        I  +     + + + E ++   P     G  +
Sbjct: 343 WDRSVSQFSWTPDNKGFYATVEDAATNRIYSIDAKNGKVKAITEATDFSQPAIGKDGELI 402

Query: 405 IFSRKKDGDTGSKLYSID-LNGRNETL 430
                +     ++L SI+  NG+ E L
Sbjct: 403 A--TNQSFLYPARLVSINPRNGKIERL 427



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 68/248 (27%), Gaps = 68/248 (27%)

Query: 260 ILAPRFSSNGKRAL-----ISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +P  S  G+  +       ++ D  +  ++  D        +T          +SPD 
Sbjct: 62  IGSPIVSPTGEHIIAPVTEYDLKADKGSTQLWHFD--GKHNRAITAKGLRVSEPVFSPDG 119

Query: 314 SQIVFESDR--EGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
             + F S R  +   Q+Y++  +G  + +R++ D         W   G  + F       
Sbjct: 120 KTLAFVSQRNEDEASQIYLLPMDGPGEAQRLT-DIPTGVNSIKWV--GKHLYFISNIFPN 176

Query: 367 ------------------------------------SGEKFAIGVMKKDGSQERLLVEDS 390
                                                  +  +  +   G     + + +
Sbjct: 177 QSWEEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPA 236

Query: 391 NLQAPT---------WSPSGRSLIF---SRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             + P           SP+ R + F     +   D    ++   + G     +     A 
Sbjct: 237 GHELPRSDQSSASYDVSPNERWIAFNAYGSENKVDPKIDIFLATIGGNKAENLTADNQAP 296

Query: 439 D--PQWVG 444
           D  P +  
Sbjct: 297 DLNPSFSP 304


>gi|116182430|ref|XP_001221064.1| hypothetical protein CHGG_01843 [Chaetomium globosum CBS 148.51]
 gi|88186140|gb|EAQ93608.1| hypothetical protein CHGG_01843 [Chaetomium globosum CBS 148.51]
          Length = 1125

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 96/318 (30%), Gaps = 47/318 (14%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        RLWD                               Q        + + 
Sbjct: 765  KTLASGSYDKTIRLWDAVTG-------------------------TLQQTLEGHSHWVTA 799

Query: 177  ILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            + F ++  ++ SG    ++ + D     ++         +    FS + + +A  +YD  
Sbjct: 800  VAFSADGKTLASGSGDKTIRLWDAVTGTLQQTLEGHSGSVTAVAFSADGKTLASGSYDK- 858

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                + L D       + +     ++ A  FS++GK    S   D+ + ++  D  +   
Sbjct: 859  ---TIRLWDAVTGTLQQTLEGHSDLVTAVAFSADGKTLA-SGSDDKTIRLW--DAVTGTL 912

Query: 295  ER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            ++ L        + ++S D   +   S     + + +  +     ++  +          
Sbjct: 913  QQTLEGHSGSVTAVAFSADGKTLASGSY---DKTIRLWDALTGTLQQTLEGHSHWVTAVA 969

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKD 411
            +S  G  +A          I +        +  +E  +    A  +S  G++L       
Sbjct: 970  FSADGKTLASGSDDKT---IRLWDAVTGTLQQTLEGHSHWVTAVAFSADGKTLA---SGS 1023

Query: 412  GDTGSKLYSIDLNGRNET 429
            GD   +L+   + G  + 
Sbjct: 1024 GDMTIRLWDA-VTGTLQQ 1040



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 77/230 (33%), Gaps = 20/230 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           ++       + +    FS + + +A  +YD      + L D       + +      + A
Sbjct: 744 LQQTLEGHSRSVTAVAFSADGKTLASGSYDK----TIRLWDAVTGTLQQTLEGHSHWVTA 799

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
             FS++GK    S   D+ + ++  D  +   ++ L        + ++S D   +   S 
Sbjct: 800 VAFSADGKTLA-SGSGDKTIRLW--DAVTGTLQQTLEGHSGSVTAVAFSADGKTLASGSY 856

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               + + +  +     ++  +          +S  G  +A          I +      
Sbjct: 857 ---DKTIRLWDAVTGTLQQTLEGHSDLVTAVAFSADGKTLASGSDDKT---IRLWDAVTG 910

Query: 382 QERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +  +E    ++ A  +S  G++L        D   +L+   L G  + 
Sbjct: 911 TLQQTLEGHSGSVTAVAFSADGKTLASGSY---DKTIRLWDA-LTGTLQQ 956



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 14/192 (7%)

Query: 219 FSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           FSP   +V    +      I  V  ++       + +      + A  FS++GK    S 
Sbjct: 712 FSPTLSRVRKQQWKKRLSFIKSVAGINDHWGTLQQTLEGHSRSVTAVAFSADGKTLA-SG 770

Query: 277 QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             D+ + ++  D  +   ++ L        + ++S D   +   S   G + + +  +  
Sbjct: 771 SYDKTIRLW--DAVTGTLQQTLEGHSHWVTAVAFSADGKTLASGS---GDKTIRLWDAVT 825

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--Q 393
              ++  +    S     +S  G  +A   +      I +        +  +E  +    
Sbjct: 826 GTLQQTLEGHSGSVTAVAFSADGKTLASGSYDKT---IRLWDAVTGTLQQTLEGHSDLVT 882

Query: 394 APTWSPSGRSLI 405
           A  +S  G++L 
Sbjct: 883 AVAFSADGKTLA 894



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 55/174 (31%), Gaps = 25/174 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISDDIY------- 163
            G+ +  G D   +  RLWD       + + G     +  ++     T++   Y       
Sbjct: 890  GKTLASGSDDKTI--RLWDAVTGTLQQTLEGHSGSVTAVAFSADGKTLASGSYDKTIRLW 947

Query: 164  -------QSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                   Q        + + + F ++  ++ SG    ++ + D     ++         +
Sbjct: 948  DALTGTLQQTLEGHSHWVTAVAFSADGKTLASGSDDKTIRLWDAVTGTLQQTLEGHSHWV 1007

Query: 215  FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                FS + + +A  + D      + L D       + +      + A   S +
Sbjct: 1008 TAVAFSADGKTLASGSGDM----TIRLWDAVTGTLQQTLEGHSGSVTAVALSLD 1057


>gi|116622781|ref|YP_824937.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225943|gb|ABJ84652.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 890

 Score = 92.8 bits (229), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 113/308 (36%), Gaps = 29/308 (9%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV-MDRDGANIRY 205
           + + W +I +     +  +++      + R+L       S      + V M   G  ++ 
Sbjct: 342 ARSDWVQITNLPDSAVQPALSP-----DGRMLSFIRGPSSFSSAGQVYVKMLPSGEPVQ- 395

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                D     P FSP+  ++AY+      I   +++          + N   ++     
Sbjct: 396 -LTRDDNFKLNPAFSPDGSRIAYSVAGAP-IWDTWVVPVLGGEPRLWLPNASGLVWF--- 450

Query: 266 SSNGK-RALISVQKDEAMDIYSVDLQ-----SNATERLTNTLFINISASYSPDSSQI-VF 318
              GK + L S  KD+ M +  V        S       +   +   +  SPD  ++ V 
Sbjct: 451 ---GKSKLLFSEIKDQLMHMAIVSADESRAGSRDLYVPPHDRAMAHRSYPSPDGKRMLVV 507

Query: 319 ESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           E D  G   +  +   +GS   +       +     W+P G+ + F+  SG  + I   +
Sbjct: 508 EMDEWGSIVRCRLGPLDGSSPGQQIGPPSGACMFAAWTPDGEWMYFSSSSGGAYHIWRQR 567

Query: 378 -KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             DG  E++    +  +    +P GRS I      G   S ++  D  GR +  I+   Y
Sbjct: 568 FPDGQAEQITSGPTEEEGLAMAPDGRSFI---TGVGLKQSSIWLHD--GRGDRQISLEGY 622

Query: 437 ASDPQWVG 444
           A  P+++ 
Sbjct: 623 AFSPKFIP 630



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 78/229 (34%), Gaps = 15/229 (6%)

Query: 220 SPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           SP+ +++     D+   I+R  L         ++IG      +   ++ +G+    S   
Sbjct: 498 SPDGKRMLVVEMDEWGSIVRCRLGPLDGSSPGQQIGPPSGACMFAAWTPDGEWMYFSSSS 557

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             A  I+         E++T+        + +PD    +      G +Q  +   +G   
Sbjct: 558 GGAYHIWRQRFPDGQAEQITSGPTEEEGLAMAPDGRSFI---TGVGLKQSSIWLHDGRGD 614

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--------ERLLVEDS 390
           ++IS +  A  F P + P G  + +    G    + V + D  +              D 
Sbjct: 615 RQISLEGYA--FSPKFIPGGKRLLYRVRKGSASELWVAELDSGRSEPLLPGFAVATAGDG 672

Query: 391 NLQAPTWSPSGRSL-IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +L     S  GR + + SR   G T   L  +D       + N      
Sbjct: 673 SLGGYDVSADGRQVLMASRDSAGKTRLWLAPLDRASAPRQIPNAEGEQP 721



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 64/355 (18%), Positives = 113/355 (31%), Gaps = 74/355 (20%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            G +    P   R +AH          +    D   R+L V       I++  L  +  D
Sbjct: 477 AGSRDLYVPPHDRAMAHR---------SYPSPDGK-RMLVVEMDEWGSIVRCRLGPL--D 524

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE------------------------- 234
           G++                ++P+ + + +++                             
Sbjct: 525 GSSPGQQIGPPSGACMFAAWTPDGEWMYFSSSSGGAYHIWRQRFPDGQAEQITSGPTEEE 584

Query: 235 -----------------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
                                ++L D R DR      +      +P+F   GKR L  V+
Sbjct: 585 GLAMAPDGRSFITGVGLKQSSIWLHDGRGDRQI----SLEGYAFSPKFIPGGKRLLYRVR 640

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISAS-------YSPDSSQIVFES-DREGKEQLY 329
           K  A +++  +L S  +E L     +  +          S D  Q++  S D  GK +L+
Sbjct: 641 KGSASELWVAELDSGRSEPLLPGFAVATAGDGSLGGYDVSADGRQVLMASRDSAGKTRLW 700

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +   + +   R   + E     PV+   G+ + F    G    +  +++DGS  R   + 
Sbjct: 701 LAPLDRASAPRQIPNAEGE--QPVFGSTGE-VFFRGIQGTSAFLYRVQQDGSGLRKASDV 757

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             +  P  SP    L  S    G  G  L+  D      T I         +W G
Sbjct: 758 PIVGIPGASPDRNWLPLSSHTTG--GMVLFRTDGGAPLMTRIPPATRL---EWSG 807



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 50/356 (14%), Positives = 110/356 (30%), Gaps = 60/356 (16%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
            +   S  Q+I  P     F  W   G  +               +              
Sbjct: 522 PLDGSSPGQQIGPPSGACMFAAWTPDGEWMY----FSSSSGGAYHI-------------- 563

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRD 199
                     WR+      D   + IT    +     +       ++G+      +   D
Sbjct: 564 ----------WRQ---RFPDGQAEQITSGPTEEEGLAMAPDGRSFITGVGLKQSSIWLHD 610

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--- 256
           G   R +  S +   F P+F P  +++ Y          +++ +    R+   +  F   
Sbjct: 611 GRGDRQI--SLEGYAFSPKFIPGGKRLLY-RVRKGSASELWVAELDSGRSEPLLPGFAVA 667

Query: 257 ---RSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQ-SNATERLTNTLFINISASYSP 311
                 +     S++G++ L++ +       ++   L  ++A  ++ N         +  
Sbjct: 668 TAGDGSLGGYDVSADGRQVLMASRDSAGKTRLWLAPLDRASAPRQIPNAEGEQ--PVFGS 725

Query: 312 DSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
                VF    +G    LY +Q +GS  ++ S         P  SP  + +  +  +   
Sbjct: 726 TGE--VFFRGIQGTSAFLYRVQQDGSGLRKASDVP--IVGIPGASPDRNWLPLSSHTTGG 781

Query: 371 FAIGVMKKDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +   + DG      R+           WS   R  ++ ++   ++  K+Y + +
Sbjct: 782 MVLF--RTDGGAPLMTRIPPATRLE----WSGD-RKYLYLQRLGVNSTGKIYVLPV 830


>gi|126656790|ref|ZP_01728004.1| beta transducin-like protein [Cyanothece sp. CCY0110]
 gi|126622010|gb|EAZ92718.1| beta transducin-like protein [Cyanothece sp. CCY0110]
          Length = 1166

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 93/234 (39%), Gaps = 26/234 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A A+ D      V L D++  +    +      I    FS + +    +  
Sbjct: 563 SFSPDGQWIATASSDG----TVRLWDSQ-GQQKAVLTGHEGNIYGVAFSPDSQTLA-TAA 616

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D+   I+  DLQ      L        S ++S D  ++   S R+   +++        
Sbjct: 617 QDDTARIW--DLQGKQLAVLKGHTASVYSVTFSQDGQRLATTS-RDNTARIW---DKEGR 670

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPT 396
              + Q    S  D  +S  G  I      G      +    G+  + L E++    + +
Sbjct: 671 PLVVLQGHTKSVDDVAFSADGQYIVTASRDGTA---KLWNNQGNLIKSLQENAIPFYSIS 727

Query: 397 WSPSGRSLIFSRKKDGDTGSKLY------SIDLNGRNETLINTPAYASDPQWVG 444
           +SP G+ +  +  +DG    K++      ++ L G ++ L+N+ A++ D  W+ 
Sbjct: 728 FSPDGQRIA-AGARDGTV--KIWDKQGNLTLTLKG-HQELVNSVAFSRDGNWIA 777



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 70/190 (36%), Gaps = 14/190 (7%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           Y     +          +   ++   +  + +  FS +G+    +   D  + ++  D Q
Sbjct: 530 YPATSPISALEQILNRIQEKNKLIGHQDAVNSVSFSPDGQWIA-TASSDGTVRLW--DSQ 586

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 LT         ++SPDS  +   + ++   +++ +Q     Q  + +   AS +
Sbjct: 587 GQQKAVLTGHEGNIYGVAFSPDSQTLA-TAAQDDTARIWDLQ---GKQLAVLKGHTASVY 642

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
              +S  G  +A T          +  K+G    +L     ++    +S  G+ ++ + +
Sbjct: 643 SVTFSQDGQRLATTSRDNTA---RIWDKEGRPLVVLQGHTKSVDDVAFSADGQYIVTASR 699

Query: 410 KDGDTGSKLY 419
              D  +KL+
Sbjct: 700 ---DGTAKLW 706



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 59/377 (15%), Positives = 124/377 (32%), Gaps = 58/377 (15%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQ-VLVTGRVIKEGKDRLRVEF---------- 128
           N +S     Q I    S    + W+S G Q  ++TG       +   V F          
Sbjct: 560 NSVSFSPDGQWIATASSDGTVRLWDSQGQQKAVLTGH----EGNIYGVAFSPDSQTLATA 615

Query: 129 ------RLWDVKDRKQIIGKKFFSS------PASWRKIAHTISDD---IYQSITGEKGDF 173
                 R+WD++ ++  + K   +S          +++A T  D+   I+          
Sbjct: 616 AQDDTARIWDLQGKQLAVLKGHTASVYSVTFSQDGQRLATTSRDNTARIWDKEGRPLVVL 675

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDG--------ANIRYLTPSRDQILFEPRFSPNQQK 225
                 V +   S   +  +    RDG         N+           +   FSP+ Q+
Sbjct: 676 QGHTKSVDDVAFSADGQY-IVTASRDGTAKLWNNQGNLIKSLQENAIPFYSISFSPDGQR 734

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A    D    ++++     +    K     + ++ +  FS +G     S   D    ++
Sbjct: 735 IAAGARD--GTVKIWDKQGNLTLTLK---GHQELVNSVAFSRDGNWIA-SGSSDGTARLW 788

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           S D        L          + +   +++   +  +G  +L+ ++   ++        
Sbjct: 789 SKD--GQEMTVLRGHQDPIYDITLNRQGTELA-TASSDGTVKLWDIRQTPNNG---FNTL 842

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSL 404
           +       +S  G L+A    SG    + +    G + R     +S + A   SP  + +
Sbjct: 843 DTYITSADFSQDGKLLAIADESG---QVYLWNLQGKKLREFEAHNSGINAIRISPDSKII 899

Query: 405 IFSRKKDGDTGSKLYSI 421
                   +   KL+++
Sbjct: 900 A---TTGTNGNVKLWNL 913



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 90/242 (37%), Gaps = 25/242 (10%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
             + + +  G  +R        I    R SP+ + +A           V L + +     +
Sbjct: 866  QVYLWNLQGKKLREFEAHNSGINAI-RISPDSKIIATT----GTNGNVKLWNLQGQLLGE 920

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISAS 308
             + +    I +  FSS+  + L    +   + ++  DLQ+N  + L      +      S
Sbjct: 921  -LTDNNVRIYSLNFSSD-SQILAVANRSGEVWLW--DLQTNPYQLLEKFQAHDDTITYVS 976

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +S ++ Q+   +  +G  +++     G+ Q+ +S           +SP+ D +       
Sbjct: 977  FSQNNRQVA-TASMDGTAKIW--NLEGNLQQSLS-GHSDPINSLSFSPKEDYLLTASEDS 1032

Query: 369  EKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                I +  ++G     L  D   +    +SP G+  I + +   D   +L+  D  G+ 
Sbjct: 1033 T---IKLWNQEGELITTLTSDLFPISRVNFSPDGQYFITASQ---DGTIRLW--DREGKL 1084

Query: 428  ET 429
             T
Sbjct: 1085 HT 1086



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 74/197 (37%), Gaps = 14/197 (7%)

Query: 173  FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            F+S    ++ +  SG +   L  +  +   +     + D  +    FS N ++VA A+ D
Sbjct: 933  FSSDSQILAVANRSGEVW--LWDLQTNPYQLLEKFQAHDDTITYVSFSQNNRQVATASMD 990

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                    + +   +      G+   +     FS      L +  +D  + ++  + +  
Sbjct: 991  G----TAKIWNLEGNLQQSLSGHSDPINSL-SFSPKEDYLL-TASEDSTIKLW--NQEGE 1042

Query: 293  ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                LT+ LF     ++SPD    +  + ++G  +L+     G    ++ +  + S    
Sbjct: 1043 LITTLTSDLFPISRVNFSPDGQYFI-TASQDGTIRLW--DREGKLHTKM-KGHQESIESL 1098

Query: 353  VWSPQGDLIAFTKFSGE 369
             +SP    I     +G+
Sbjct: 1099 QFSPDNQTILTISRNGK 1115


>gi|255532240|ref|YP_003092612.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Pedobacter heparinus DSM 2366]
 gi|255345224|gb|ACU04550.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Pedobacter heparinus DSM 2366]
          Length = 708

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 87/282 (30%), Gaps = 38/282 (13%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V+ +      K  +  +  DG     +    + IL     SP   +V +         + 
Sbjct: 115 VNVNASPEPPKVQIHALSFDGKQHIVIGEGENPIL-----SPKSDQVLFTRKG-----QA 164

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           ++     +   K++     +    ++S  G        + +   I     ++ A + L+ 
Sbjct: 165 WIASLAAEPLAKQLFQANGITGEMQWSPKGNAIAFVSNRSDHSFIGIYTDKNTAIKWLSP 224

Query: 300 TLFINISASYSPDSSQIVFESD--REGKEQ-----------LYVMQSNGSDQKRISQDKE 346
           +   + S  +SPD  Q+ F     R G              ++       + +++ +  +
Sbjct: 225 SFNRDRSPRWSPDGDQLAFVRTPGRGGATDSILSRKHQPWAIWNTDLKTMEARQVWKAPQ 284

Query: 347 ASYFDPVWSPQ--------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTW 397
                P  +          G+ I F         +  +   G    LL     + +    
Sbjct: 285 TLAGSPPTTQGGTNLNWGTGNRILFVSAQDGWSHLYSIPAAGGPALLLTPGEFMAEHIVL 344

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           SP  + L FS     D+       D++ R+   +     A +
Sbjct: 345 SPDKKWLYFSANTGKDSK------DIDRRHIARVPVNKAAME 380



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 106/298 (35%), Gaps = 40/298 (13%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
           +SP   +   H +S D  Q I    G+  + IL      V    K    +       +  
Sbjct: 119 ASPEPPKVQIHALSFDGKQHIVI--GEGENPILSPKSDQVLFTRKGQAWIASLAAEPLAK 176

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                + I  E ++SP    +A+ +   +       + T  + A K +    +   +PR+
Sbjct: 177 QLFQANGITGEMQWSPKGNAIAFVSNRSDHSF--IGIYTDKNTAIKWLSPSFNRDRSPRW 234

Query: 266 SSNGKRALIS-------------VQKDEAMDIYSVDLQSNATERL------------TNT 300
           S +G +                  +K +   I++ DL++    ++            T  
Sbjct: 235 SPDGDQLAFVRTPGRGGATDSILSRKHQPWAIWNTDLKTMEARQVWKAPQTLAGSPPTTQ 294

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                + ++    ++I+F S ++G   LY + + G     ++  +  +    V SP    
Sbjct: 295 GG--TNLNWG-TGNRILFVSAQDGWSHLYSIPAAGGPALLLTPGEFMAE-HIVLSPDKKW 350

Query: 361 IAFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKD 411
           + F+  +G      ++  I  +  + +   ++ E +NL+  P  +   + + F     
Sbjct: 351 LYFSANTGKDSKDIDRRHIARVPVNKAAMEVISEGTNLEWTPAITGDSKYITFITSIG 408



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 31/199 (15%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVF------ 318
           G +   +  +    ++Y  +       +LT+    +     S S S D + +VF      
Sbjct: 46  GNKIAWAFDEQGKRNVYVAEAPDFKARKLTDYNEDDGQEISSLSISADGNWVVFLRGGDH 105

Query: 319 -------------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
                         S    K Q++ +  +G     I + +      P+ SP+ D + FT+
Sbjct: 106 GSNWNDEAPVNVNASPEPPKVQIHALSFDGKQHIVIGEGEN-----PILSPKSDQVLFTR 160

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               +  I  +  +   ++L   +       WSP G ++ F   +   +   +Y+ D N 
Sbjct: 161 K--GQAWIASLAAEPLAKQLFQANGITGEMQWSPKGNAIAFVSNRSDHSFIGIYT-DKNT 217

Query: 426 RNETLINTPAYASDPQWVG 444
             + L  +      P+W  
Sbjct: 218 AIKWLSPSFNRDRSPRWSP 236


>gi|299146181|ref|ZP_07039249.1| prolyl oligopeptidase family protein [Bacteroides sp. 3_1_23]
 gi|298516672|gb|EFI40553.1| prolyl oligopeptidase family protein [Bacteroides sp. 3_1_23]
          Length = 700

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 109/322 (33%), Gaps = 64/322 (19%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           +++ F+S    +    + L  M+ DG+  + LT     I      SP+ +K+ + +    
Sbjct: 115 TKLAFLS----NDNGSSQLYEMNPDGSGRKQLTNYDGDIEGY-SISPDGKKLLFISQVKT 169

Query: 232 ---------DDEDILRVYLMDTRIDRAPKRIG--------NFRSMILA---------PRF 265
                    D      + + D       + +         +F    ++         P  
Sbjct: 170 KESTADKYPDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVDILNDEPYE 229

Query: 266 SS--------------NGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLF 302
           S                  +   + +K            DIY  DL +  TE +T     
Sbjct: 230 SPMKPWGGIEQLAWNMTSDKVAYTCRKKTGLEYAISTNSDIYIYDLNTKKTENITEENKG 289

Query: 303 INISASYSPDSSQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + +  YSPD   I ++S +R+G      +L++M     +++ +S+  E++    VW   
Sbjct: 290 YDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKTFESNVDAFVWGAD 349

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             +I FT     +  I  +       + +           +  G  LI +++     G +
Sbjct: 350 AKVIYFTGVWHGESQIYALDLANDSVKAITSGMYDYEGV-ALFGDKLI-AKRHSMSMGDE 407

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           +YS+ L+G    L        D
Sbjct: 408 IYSVALDGSTTQLTQENKQIYD 429



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 94/280 (33%), Gaps = 67/280 (23%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISV------QKD 279
           T D     +V +  + I    KR+          I     S +GK+   +V      +  
Sbjct: 21  TKDAGKTDQVLIEKSDIKIEGKRMTPEALWAMGRIGGFAVSPDGKKIAYTVAYYSVPENK 80

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +++ ++   +  +++T T +     ++    +++ F S+  G  QLY M  +GS +K
Sbjct: 81  SNREVFVMNADGSENQQITRTPYQENEVTWIKGGTKLAFLSNDNGSSQLYEMNPDGSGRK 140

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK----------------------------- 370
           +++ + +        SP G  + F      K                             
Sbjct: 141 QLT-NYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTDLMYKHWDEW 199

Query: 371 ----FAIGVMKKDGSQERLLVEDSNLQAPTWSPS--------------GRSLIFS-RKKD 411
                   V   DG+    +V+  N + P  SP                  + ++ RKK 
Sbjct: 200 VTTAPHPFVADFDGNGISNIVDILNDE-PYESPMKPWGGIEQLAWNMTSDKVAYTCRKKT 258

Query: 412 G-----DTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           G      T S +Y  DLN +    I      Y ++PQ+  
Sbjct: 259 GLEYAISTNSDIYIYDLNTKKTENITEENKGYDTNPQYSP 298



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/321 (15%), Positives = 108/321 (33%), Gaps = 69/321 (21%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG+  + +T +  Q      +     K+A+ + D+       +
Sbjct: 74  YSVPENKSNREVFVMNADGSENQQITRTPYQENEV-TWIKGGTKLAFLSNDNGSSQLYEM 132

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------------- 278
                 R  K++ N+   I     S +GK+ L   Q                        
Sbjct: 133 NPDGSGR--KQLTNYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTD 190

Query: 279 ----------DEAMDIYSVDLQSNATERLTNTLFINISA--------------SYSPDSS 314
                       A   +  D   N    + + L  N                 +++  S 
Sbjct: 191 LMYKHWDEWVTTAPHPFVADFDGNGISNIVDIL--NDEPYESPMKPWGGIEQLAWNMTSD 248

Query: 315 QIVFE-SDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++ +    + G          +Y+   N    + I+++ +    +P +SP G  IA+   
Sbjct: 249 KVAYTCRKKTGLEYAISTNSDIYIYDLNTKKTENITEENKGYDTNPQYSPDGKYIAWQSM 308

Query: 367 SGEKFA-----IGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             + +      + +M  +  ++R + +   SN+ A  W    + + F+    G+  S++Y
Sbjct: 309 ERDGYEADLNRLFIMNLETGEKRFVSKTFESNVDAFVWGADAKVIYFTGVWHGE--SQIY 366

Query: 420 SIDLNGRNETLINTPAYASDP 440
           ++DL   +   I +  Y  + 
Sbjct: 367 ALDLANDSVKAITSGMYDYEG 387



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 84/276 (30%), Gaps = 61/276 (22%)

Query: 218 RFSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+ +K+AY     +  +    R   +        ++I           +   G +  
Sbjct: 59  AVSPDGKKIAYTVAYYSVPENKSNREVFVMNADGSENQQITRTPYQENEVTWIKGGTKLA 118

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-------- 325
                + +  +Y ++   +  ++LTN        S SPD  +++F S  + K        
Sbjct: 119 FLSNDNGSSQLYEMNPDGSGRKQLTNYDGDIEGYSISPDGKKLLFISQVKTKESTADKYP 178

Query: 326 -------------------------EQLYVMQSNGSDQKRISQ-----------DKEASY 349
                                       +V   +G+    I                   
Sbjct: 179 DLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVDILNDEPYESPMKPWGGI 238

Query: 350 FDPVWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSP 399
               W+   D +A+T                I +   +  +   + E+       P +SP
Sbjct: 239 EQLAWNMTSDKVAYTCRKKTGLEYAISTNSDIYIYDLNTKKTENITEENKGYDTNPQYSP 298

Query: 400 SGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLIN 432
            G+ + + S ++DG     ++L+ ++L    +  ++
Sbjct: 299 DGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVS 334


>gi|313147339|ref|ZP_07809532.1| prolyl oligopeptidase [Bacteroides fragilis 3_1_12]
 gi|313136106|gb|EFR53466.1| prolyl oligopeptidase [Bacteroides fragilis 3_1_12]
          Length = 702

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 60/390 (15%), Positives = 128/390 (32%), Gaps = 78/390 (20%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDV---KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            G +      +     V +  + V   K  +++       +    R+I HT     +Q  
Sbjct: 55  IGGLSVSPDGKQIAYTVAY--YSVPENKSNREVFVMNADGTDN--RQITHTP----FQEN 106

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                   S++LF+S    +    + L  M+ DG+  + ++     I      SP+ +K+
Sbjct: 107 EVTWATDGSKLLFLS----NDNGSSQLYEMNPDGSGRKQISNYDGNIEGY-SISPDGKKI 161

Query: 227 AYATY------------DDEDILRVYLMDTRIDRAPKRIGNFR----------------- 257
            +               D +    + + D       + +                     
Sbjct: 162 LFIAQVKTVKSTADKYPDLDKATGIIITDLMYKHWDEWVTTAPHPFIADFDGKSVTNIVD 221

Query: 258 --------------SMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATE 295
                           I    +++   +   + +K            DIY  DL +  T 
Sbjct: 222 VLEGEPYESPMKPWGGIEQLAWNTTSDKVAYTCRKKTGLAYAISTNSDIYVYDLNTKKTI 281

Query: 296 RLTNTL-FINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASY 349
            +T  +   + +  YSPD   I ++S +R+G    + +L++M     +++  S+  +++ 
Sbjct: 282 NITEGMMGYDTNPQYSPDGKSIAWQSMERDGYEADQNRLFIMNLETGEKRFASKAFDSNV 341

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              VWS     I FT     +  I  +       R +           +  G  LI +++
Sbjct: 342 DAFVWSQDAKTIYFTGVWHGETQIYSLDLTNDSVRPVTSGMYDYEGV-ALFGDKLI-AKR 399

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                G ++Y++ L+G+   L        D
Sbjct: 400 HSMSMGDEIYAVSLDGQTTQLTQENKQIYD 429



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 87/248 (35%), Gaps = 63/248 (25%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S +GK+   +V      +     +++ ++       ++T+T F     +++ 
Sbjct: 53  GRIGGLSVSPDGKQIAYTVAYYSVPENKSNREVFVMNADGTDNRQITHTPFQENEVTWAT 112

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
           D S+++F S+  G  QLY M  +GS +K+IS + + +      SP G  I F        
Sbjct: 113 DGSKLLFLSNDNGSSQLYEMNPDGSGRKQIS-NYDGNIEGYSISPDGKKILFIAQVKTVK 171

Query: 367 -SGEKF---------------------------AIGVMKKDGSQERLLVEDSNLQAPTWS 398
            + +K+                              +   DG     +V D     P  S
Sbjct: 172 STADKYPDLDKATGIIITDLMYKHWDEWVTTAPHPFIADFDGKSVTNIV-DVLEGEPYES 230

Query: 399 PS--------------GRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTP--AY 436
           P                  + ++ RKK G      T S +Y  DLN +    I      Y
Sbjct: 231 PMKPWGGIEQLAWNTTSDKVAYTCRKKTGLAYAISTNSDIYVYDLNTKKTINITEGMMGY 290

Query: 437 ASDPQWVG 444
            ++PQ+  
Sbjct: 291 DTNPQYSP 298



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 89/243 (36%), Gaps = 25/243 (10%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMD 243
              + + V D +      +T         P++SP+ + +A+ + + +    D  R+++M+
Sbjct: 265 STNSDIYVYDLNTKKTINITEGMMGYDTNPQYSPDGKSIAWQSMERDGYEADQNRLFIMN 324

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                       F S + A  +S + K    +        IYS+DL +++   +T+ ++ 
Sbjct: 325 LETGEKRFASKAFDSNVDAFVWSQDAKTIYFTGVWHGETQIYSLDLTNDSVRPVTSGMYD 384

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               +   D   I         +++Y +  +G    +++Q+ +  Y         D I  
Sbjct: 385 YEGVALFGD-KLIAKRHSMSMGDEIYAVSLDG-QTTQLTQENKQIY---------DQIEM 433

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSI 421
            K  G      +   DG +         +  P + P+ +   L+F         S+ +S 
Sbjct: 434 GKVEGR----WMKTTDGKEM----LTWVIYPPQFDPNKKYPTLLFCEGGPQSPVSQFWSY 485

Query: 422 DLN 424
             N
Sbjct: 486 RWN 488


>gi|73669000|ref|YP_305015.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
 gi|72396162|gb|AAZ70435.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
          Length = 669

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 93/274 (33%), Gaps = 24/274 (8%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +N+RI+++            + + D        +T S         +     ++ Y+ +
Sbjct: 54  IYNNRIVWIDIDYAELETYYDVYMYDLSTKKETQITTSGHAGENPAIY---GDRIVYSDH 110

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +   + +Y + T+        GN     +         R +         DIY  DL +
Sbjct: 111 YEGSEIYMYDLSTKKRTQITTSGNAEDPAIY------NNRIVW----RGNYDIYMYDLST 160

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               ++T+   I  + S      +IV+  DR G   +Y+   +   + +I+     +   
Sbjct: 161 KKETQITSEESIQTNPSIY--GDRIVWNDDRNGNWDIYMYNVSTKKETQITNGSSWAIDP 218

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKK 410
            ++   GD I +       + I +      +E  +    + Q  P     G  +++    
Sbjct: 219 AIY---GDRIVWMDERSGNYDIYMYDLSTKKETQITSSPDAQTHPAI--YGNRIVWEDDG 273

Query: 411 DGD---TGSKLYSIDLNGRNETLINTPAYASDPQ 441
             D   T   +Y  D++   +  I+    A +P 
Sbjct: 274 GEDDDYTNHGIYMYDISTNQKMKISNKGSARNPA 307



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 82/232 (35%), Gaps = 24/232 (10%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +   D +  +    +      +P    N  ++ +          +Y+ D    +   +I 
Sbjct: 116 IYMYDLSTKKRTQITTSGNAEDPAIYNN--RIVW-----RGNYDIYMYDLST-KKETQIT 167

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +  S+   P  S  G R + +  ++   DIY  ++ +    ++TN     I  +      
Sbjct: 168 SEESIQTNP--SIYGDRIVWNDDRNGNWDIYMYNVSTKKETQITNGSSWAIDPAIY--GD 223

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-----TKFSGE 369
           +IV+  +R G   +Y+   +   + +I+   +A     ++   G+ I +           
Sbjct: 224 RIVWMDERSGNYDIYMYDLSTKKETQITSSPDAQTHPAIY---GNRIVWEDDGGEDDDYT 280

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYS 420
              I +     +Q+  +    + + P  +S +   +++    D      +Y 
Sbjct: 281 NHGIYMYDISTNQKMKISNKGSARNPAIYSNN---VVWKYVADIYGNGDIYM 329


>gi|20091406|ref|NP_617481.1| WD-domain-containing protein [Methanosarcina acetivorans C2A]
 gi|19916545|gb|AAM05961.1| WD-domain containing protein [Methanosarcina acetivorans C2A]
          Length = 1051

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 104/311 (33%), Gaps = 45/311 (14%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLW+V   K+I   K            H  S  I +      G           +  S  
Sbjct: 593 RLWNVSTGKEIAVLK------------HDYS--IKKVFFSPDGK--------KVATASAD 630

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L      G  I  +   +D +     FSP+ +KVA A+ D  +   ++ + T I  
Sbjct: 631 ETARLWDA-YTGKEIAIMNHGKDVVDI--AFSPDGKKVATASAD--NTSCIWDVYTEI-- 683

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
               + N +  +L   FS +G     +  +D    ++  D  +     +         A 
Sbjct: 684 ---PVLNHKDSVLNVEFSPDGVYVA-TASQDNTARVW--DAYTGEEISVLKHDAGINKAV 737

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++ D   +   + ++   +++    N S  K I+        D  +SP G  +A      
Sbjct: 738 FNRDGKYVA-TASQDNTARVW----NTSTGKDITLKHGGGVLDVAFSPDGKYVATASQDN 792

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               +        +   L  +  +    +SP G+ +  +     D  ++++S    G+  
Sbjct: 793 TA-RVWNWNAPTGENITLKHEGWVNKIVFSPDGKYVATAS---ADNTARIWSAS-TGKQI 847

Query: 429 TLINTPAYASD 439
            +I+      D
Sbjct: 848 DVISHDGSVQD 858



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 96/254 (37%), Gaps = 23/254 (9%)

Query: 166  ITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            IT + G     + F  +   V +    N+  V + +      +T   +  + +  FSP+ 
Sbjct: 765  ITLKHGGGVLDVAFSPDGKYVATASQDNTARVWNWNAPTGENITLKHEGWVNKIVFSPDG 824

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            + VA A+ D  +  R++   T        + +    +    FSS+GK    +   D    
Sbjct: 825  KYVATASAD--NTARIWSASTGKQID---VISHDGSVQDVEFSSDGKYVA-TASDDNTAK 878

Query: 284  IYSVDLQSNATERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            ++  +  ++  + +T     N        ++SPD  ++   +  +   +++ +  + +D 
Sbjct: 879  VW--NWNTSTRKNITLKHTLNHSNKVHDVAFSPDGKKVA-TASWDKNARIWNLSIS-NDF 934

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTW 397
              +S D   S  +  +S  G  IA T +    F   +           +  D  +    +
Sbjct: 935  TNLSHDDYVSRVE--FSSDGKFIATTSYGETAF---IWDASTGDKIAAISHDGVVNDVVF 989

Query: 398  SPSGRSLIFSRKKD 411
            SP+G+ +  +   +
Sbjct: 990  SPNGKYIATASDDN 1003



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 110/326 (33%), Gaps = 52/326 (15%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           R+WD    ++I   K  +               I +++    G          + V +  
Sbjct: 714 RVWDAYTGEEISVLKHDAG--------------INKAVFNRDG----------KYVATAS 749

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             N+  V +   +  + +T      + +  FSP+ + VA A+ D  +  RV+  +     
Sbjct: 750 QDNTARVWNT--STGKDITLKHGGGVLDVAFSPDGKYVATASQD--NTARVWNWNAPTGE 805

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                      +    FS +GK    +   D    I+S    +     + +         
Sbjct: 806 NITL--KHEGWVNKIVFSPDGKYVA-TASADNTARIWS--ASTGKQIDVISHDGSVQDVE 860

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLIAFT 364
           +S D   +   SD        V   N S +K I+     ++ +      +SP G  +A  
Sbjct: 861 FSSDGKYVATASD---DNTAKVWNWNTSTRKNITLKHTLNHSNKVHDVAFSPDGKKVATA 917

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK------DGDTGSKL 418
            +  +   I  +    +    L  D  +    +S  G+ +  +         D  TG K+
Sbjct: 918 SWD-KNARIWNLSIS-NDFTNLSHDDYVSRVEFSSDGKFIATTSYGETAFIWDASTGDKI 975

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
            +I  +G    ++N   ++ + +++ 
Sbjct: 976 AAISHDG----VVNDVVFSPNGKYIA 997



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 85/230 (36%), Gaps = 18/230 (7%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            D  + +  FSP+ + VA  + +     +  + D   +     I +    +    FS +G
Sbjct: 320 HDDWVNKTIFSPDGKYVATVSNE-----KAQIWDLSTEETIDVI-SHNGSVRDVNFSPDG 373

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           K    +  +D+   I+  ++ ++    + N         +SP+   I   S        Y
Sbjct: 374 KYVA-TASRDKTSHIW--NISTHKEIAVLNHNDELAKVFFSPNGKYIATMSY---GSTAY 427

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVE 388
           V  ++  +Q  + +  +    D   SP G  IA            V + +    +  L  
Sbjct: 428 VWNASTYEQIAVLKHAD-KVCDVELSPDGKYIATASQDNTSRLWDVTEAENITLKHTLKH 486

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           + ++   T+SP G  +  + +   D  + ++ +   G+  T++N     S
Sbjct: 487 NGSVLDVTFSPDGEKVATASQ---DKTACIWDVS-TGKQITVLNHSNSVS 532



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 51/338 (15%), Positives = 109/338 (32%), Gaps = 78/338 (23%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           +WDV   KQI      +S +                    K  F+S    V+  +   I 
Sbjct: 513 IWDVSTGKQITVLNHSNSVS--------------------KIIFSSDGKKVAMMISGNIA 552

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
               C+ +  G  I  +  +   ++ +  FSP+ +KVA A+ D        L +    + 
Sbjct: 553 ----CLWNSTGKQIDVM--NHTDVMRDVAFSPDGEKVATASADRTSR----LWNVSTGKE 602

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              + +  S+     FS +GK+   +   DE   ++  D  +     + N     +  ++
Sbjct: 603 IAVLKHDYSIKK-VFFSPDGKKVA-TASADETARLW--DAYTGKEIAIMNHGKDVVDIAF 658

Query: 310 SPDSSQIV------------------------------------FESDREGKEQLYVMQS 333
           SPD  ++                                     + +         V  +
Sbjct: 659 SPDGKKVATASADNTSCIWDVYTEIPVLNHKDSVLNVEFSPDGVYVATASQDNTARVWDA 718

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
              ++  + +  +A     V++  G  +A            V      ++  L     + 
Sbjct: 719 YTGEEISVLK-HDAGINKAVFNRDGKYVATASQDNTA---RVWNTSTGKDITLKHGGGVL 774

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
              +SP G+ +  + +   D  +++++ +   G N TL
Sbjct: 775 DVAFSPDGKYVATASQ---DNTARVWNWNAPTGENITL 809



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 86/225 (38%), Gaps = 16/225 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +A A+ D  +  R++ +    +   K        +L   FS +G++   +  +D
Sbjct: 452 SPDGKYIATASQD--NTSRLWDVTEAENITLKHTLKHNGSVLDVTFSPDGEKVA-TASQD 508

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +   I+  D+ +     + N         +S D  ++           +  + ++   Q 
Sbjct: 509 KTACIW--DVSTGKQITVLNHSNSVSKIIFSSDGKKVA----MMISGNIACLWNSTGKQI 562

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            +    +    D  +SP G+ +A T  +     +  +   G +  +L  D +++   +SP
Sbjct: 563 DVMNHTDV-MRDVAFSPDGEKVA-TASADRTSRLWNVST-GKEIAVLKHDYSIKKVFFSP 619

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            G+ +  +     D  ++L+     G+   ++N      D  +  
Sbjct: 620 DGKKVATAS---ADETARLWDA-YTGKEIAIMNHGKDVVDIAFSP 660



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 93/279 (33%), Gaps = 25/279 (8%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F++    D  Q+I +     P S   + H   D + ++I    G + + +      +  
Sbjct: 291 SFQILKTVDADQLIRQGLLFIPHSVVVLKH--DDWVNKTIFSPDGKYVATVSNEKAQIWD 348

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              + ++ V+            S +  + +  FSP+ + VA A+ D       ++ +   
Sbjct: 349 LSTEETIDVI------------SHNGSVRDVNFSPDGKYVATASRDKTS----HIWNIST 392

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +    + N    +    FS NGK              Y  +  +     +         
Sbjct: 393 HKEIAVL-NHNDELAKVFFSPNGKYIA---TMSYGSTAYVWNASTYEQIAVLKHADKVCD 448

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              SPD   I   + ++   +L+ +    +   + +     S  D  +SP G+ +A    
Sbjct: 449 VELSPDGKYIA-TASQDNTSRLWDVTEAENITLKHTLKHNGSVLDVTFSPDGEKVATASQ 507

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                   V    G Q  +L   +++    +S  G+ + 
Sbjct: 508 DKTACIWDV--STGKQITVLNHSNSVSKIIFSSDGKKVA 544


>gi|119487581|ref|ZP_01621191.1| Serine/Threonine protein kinase with WD40 repeats [Lyngbya sp. PCC
           8106]
 gi|119455750|gb|EAW36886.1| Serine/Threonine protein kinase with WD40 repeats [Lyngbya sp. PCC
           8106]
          Length = 584

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 95/306 (31%), Gaps = 40/306 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       +LWDV+ +++I                               G  +  
Sbjct: 315 RTLASGSWDNTIKLWDVQTQREIATLT-----------------------GHSNGVLSVA 351

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               S ++ SG   N++ + D            R   +    FSP+ + +A         
Sbjct: 352 FSRDSRTLASGSWDNTIKLWDVQTQRQIATLTGRSNSVRSVAFSPDGRTLA----SGNGD 407

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATE 295
             + L D +  R    +    + + +  FS +G+    S  +D+ + ++  D+Q+     
Sbjct: 408 KTIKLWDVQTQRQIATLTGRSNSVRSVAFSPDGRTLA-SGSEDKTIKLW--DVQTRREIT 464

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVW 354
            LT       S + SPD   +       G ++ + +       +               +
Sbjct: 465 TLTGHSDWVNSVAISPDGRTLA----SGGNDKTIKLWDVQTRREIATLTGHSNWVNSVAF 520

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           SP    +A +    +   +  ++       L    + + +  +SP GR+L        D 
Sbjct: 521 SPDSRTLA-SGSGDDTIKLWDVQTQREIATLTRRSNTVNSVAFSPDGRTLASGSY---DN 576

Query: 415 GSKLYS 420
             KL+ 
Sbjct: 577 TIKLWR 582


>gi|255009563|ref|ZP_05281689.1| putative exported aminopeptidase [Bacteroides fragilis 3_1_12]
          Length = 694

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 60/390 (15%), Positives = 128/390 (32%), Gaps = 78/390 (20%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDV---KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            G +      +     V +  + V   K  +++       +    R+I HT     +Q  
Sbjct: 47  IGGLSVSPDGKQIAYTVAY--YSVPENKSNREVFVMNADGTDN--RQITHTP----FQEN 98

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                   S++LF+S    +    + L  M+ DG+  + ++     I      SP+ +K+
Sbjct: 99  EVTWATDGSKLLFLS----NDNGSSQLYEMNPDGSGRKQISNYDGNIEGY-SISPDGKKI 153

Query: 227 AYATY------------DDEDILRVYLMDTRIDRAPKRIGNFR----------------- 257
            +               D +    + + D       + +                     
Sbjct: 154 LFIAQVKTVKSTADKYPDLDKATGIIITDLMYKHWDEWVTTAPHPFIADFDGKSVTNIVD 213

Query: 258 --------------SMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATE 295
                           I    +++   +   + +K            DIY  DL +  T 
Sbjct: 214 VLEGEPYESPMKPWGGIEQLAWNTTSDKVAYTCRKKTGLAYAISTNSDIYVYDLNTKKTI 273

Query: 296 RLTNTL-FINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASY 349
            +T  +   + +  YSPD   I ++S +R+G    + +L++M     +++  S+  +++ 
Sbjct: 274 NITEGMMGYDTNPQYSPDGKSIAWQSMERDGYEADQNRLFIMNLETGEKRFASKAFDSNV 333

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              VWS     I FT     +  I  +       R +           +  G  LI +++
Sbjct: 334 DAFVWSQDAKTIYFTGVWHGETQIYSLDLTNDSVRPVTSGMYDYEGV-ALFGDKLI-AKR 391

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                G ++Y++ L+G+   L        D
Sbjct: 392 HSMSMGDEIYAVSLDGQTTQLTQENKQIYD 421



 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 87/248 (35%), Gaps = 63/248 (25%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S +GK+   +V      +     +++ ++       ++T+T F     +++ 
Sbjct: 45  GRIGGLSVSPDGKQIAYTVAYYSVPENKSNREVFVMNADGTDNRQITHTPFQENEVTWAT 104

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
           D S+++F S+  G  QLY M  +GS +K+IS + + +      SP G  I F        
Sbjct: 105 DGSKLLFLSNDNGSSQLYEMNPDGSGRKQIS-NYDGNIEGYSISPDGKKILFIAQVKTVK 163

Query: 367 -SGEKF---------------------------AIGVMKKDGSQERLLVEDSNLQAPTWS 398
            + +K+                              +   DG     +V D     P  S
Sbjct: 164 STADKYPDLDKATGIIITDLMYKHWDEWVTTAPHPFIADFDGKSVTNIV-DVLEGEPYES 222

Query: 399 PS--------------GRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTP--AY 436
           P                  + ++ RKK G      T S +Y  DLN +    I      Y
Sbjct: 223 PMKPWGGIEQLAWNTTSDKVAYTCRKKTGLAYAISTNSDIYVYDLNTKKTINITEGMMGY 282

Query: 437 ASDPQWVG 444
            ++PQ+  
Sbjct: 283 DTNPQYSP 290



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 89/243 (36%), Gaps = 25/243 (10%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMD 243
              + + V D +      +T         P++SP+ + +A+ + + +    D  R+++M+
Sbjct: 257 STNSDIYVYDLNTKKTINITEGMMGYDTNPQYSPDGKSIAWQSMERDGYEADQNRLFIMN 316

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                       F S + A  +S + K    +        IYS+DL +++   +T+ ++ 
Sbjct: 317 LETGEKRFASKAFDSNVDAFVWSQDAKTIYFTGVWHGETQIYSLDLTNDSVRPVTSGMYD 376

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               +   D   I         +++Y +  +G    +++Q+ +  Y         D I  
Sbjct: 377 YEGVALFGD-KLIAKRHSMSMGDEIYAVSLDG-QTTQLTQENKQIY---------DQIEM 425

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSI 421
            K  G      +   DG +         +  P + P+ +   L+F         S+ +S 
Sbjct: 426 GKVEGR----WMKTTDGKEM----LTWVIYPPQFDPNKKYPTLLFCEGGPQSPVSQFWSY 477

Query: 422 DLN 424
             N
Sbjct: 478 RWN 480


>gi|330995271|ref|ZP_08319182.1| WD40-like protein [Paraprevotella xylaniphila YIT 11841]
 gi|329575988|gb|EGG57508.1| WD40-like protein [Paraprevotella xylaniphila YIT 11841]
          Length = 328

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 87/258 (33%), Gaps = 55/258 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S +  ++AY ++ + +   +++ D     +  +  N R+ +L   +S +GK+ + S  +
Sbjct: 73  ISTDGSQIAYLSFRN-NTTNIFIKDLSKQGSSIQKTN-RTAVLDFSYSPDGKQIVFSEAR 130

Query: 279 DEAMDIYSVDLQSNAT-ERLTNTLFINISASYS--------------------------- 310
            +   I+           ++T    ++ S  YS                           
Sbjct: 131 GKTNQIFQTSANKGFVCRQITTGN-MDYSPIYSANMNLIFFARQENKSISIWSHDMKNNF 189

Query: 311 -----------PDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                      P   +  F   R    G  +++ +      ++ I    +  +  P  SP
Sbjct: 190 LANYSQGLNPYPVKGEPAFICVRPNAAGHSEIWKVNYETGVEECIVSQPDRDFTSPSISP 249

Query: 357 QGDLIAFT--------KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFS 407
            G  + F          FS     + V + DG+    L    ++  +P WS  G  + F 
Sbjct: 250 DGQWLLFVGSSKIETGSFSYYNTDLFVSRLDGTGFAQLTYHAADDLSPVWSKDGHYIYFV 309

Query: 408 RKKDG-DTGSKLYSIDLN 424
            ++   +  + ++ +  N
Sbjct: 310 SQRGNKEAKANIWRMTFN 327


>gi|145477231|ref|XP_001424638.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124391704|emb|CAK57240.1| unnamed protein product [Paramecium tetraurelia]
          Length = 340

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 96/255 (37%), Gaps = 17/255 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ SG   NS+ + D      +      + ++F   FSP+   +A  + D    + + L 
Sbjct: 29  TLASGSWDNSIRLWDVKTGQQKAKLDGHEDLVFSVNFSPDGTTLASGSRD----ISIRLW 84

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTL 301
           D +  +   ++    S +L+  FS +G     S   D ++ ++  D+++   + +L    
Sbjct: 85  DVKTGQQKAKLDGHSSTVLSVNFSPDGTTLA-SGSGDNSIRLW--DVKTGQQKAKLDGHS 141

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++SPD + +   S     + + +       QK              +SP G  +
Sbjct: 142 HYVRSVNFSPDGTTLASGS---WDKSIRLWDVKTGQQKAELYGHSRYVMSVNFSPDGTTL 198

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A +  +     +  +K    + +L     ++ +  +SP   +L       G   + +   
Sbjct: 199 A-SGIADNSIRLWDVKTGQQKAKLEGHSDSVCSVNFSPDSTTLA-----SGSNDNSICLW 252

Query: 422 DLNGRNETLINTPAY 436
           D+    E L +   Y
Sbjct: 253 DVKTSKEMLQSDEGY 267



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 78/207 (37%), Gaps = 16/207 (7%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +       + +    FSP+   +A  ++D+     + L D +  +   ++     ++ 
Sbjct: 6   NQKAELYGHSRYVMSVNFSPDGTTLASGSWDN----SIRLWDVKTGQQKAKLDGHEDLVF 61

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFES 320
           +  FS +G     S  +D ++ ++  D+++   + +L       +S ++SPD + +   S
Sbjct: 62  SVNFSPDGTTLA-SGSRDISIRLW--DVKTGQQKAKLDGHSSTVLSVNFSPDGTTLASGS 118

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              G   + +       QK              +SP G  +A   +      I +     
Sbjct: 119 ---GDNSIRLWDVKTGQQKAKLDGHSHYVRSVNFSPDGTTLASGSWDKS---IRLWDVKT 172

Query: 381 SQER--LLVEDSNLQAPTWSPSGRSLI 405
            Q++  L      + +  +SP G +L 
Sbjct: 173 GQQKAELYGHSRYVMSVNFSPDGTTLA 199



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 87/277 (31%), Gaps = 41/277 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  +Q                 H   D ++       G     
Sbjct: 28  TTLASGSWDNSIRLWDVKTGQQKAKLD-----------GHE--DLVFSVNFSPDG----- 69

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG    S+ + D      +         +    FSP+   +A  + D+   
Sbjct: 70  -----TTLASGSRDISIRLWDVKTGQQKAKLDGHSSTVLSVNFSPDGTTLASGSGDN--- 121

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D +  +   ++      + +  FS +G     S   D+++ ++  D+++   + 
Sbjct: 122 -SIRLWDVKTGQQKAKLDGHSHYVRSVNFSPDGTTLA-SGSWDKSIRLW--DVKTGQQKA 177

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            L       +S ++SPD + +       G     + +       QK   +    S     
Sbjct: 178 ELYGHSRYVMSVNFSPDGTTLA-----SGIADNSIRLWDVKTGQQKAKLEGHSDSVCSVN 232

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +SP    +A          I +     S+E L  ++ 
Sbjct: 233 FSPDSTTLASGSNDNS---ICLWDVKTSKEMLQSDEG 266



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 71/197 (36%), Gaps = 15/197 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLF 302
            R D     +      +++  FS +G     S   D ++ ++  D+++   + +L     
Sbjct: 2   LRQDNQKAELYGHSRYVMSVNFSPDGTTLA-SGSWDNSIRLW--DVKTGQQKAKLDGHED 58

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +  S ++SPD + +   S R+   +L+        QK       ++     +SP G  +A
Sbjct: 59  LVFSVNFSPDGTTLASGS-RDISIRLW--DVKTGQQKAKLDGHSSTVLSVNFSPDGTTLA 115

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
                     I +      Q++  ++  +    +  +SP G +L        D   +L+ 
Sbjct: 116 SGSGDNS---IRLWDVKTGQQKAKLDGHSHYVRSVNFSPDGTTLASGSW---DKSIRLWD 169

Query: 421 IDLNGRNETLINTPAYA 437
           +    +   L     Y 
Sbjct: 170 VKTGQQKAELYGHSRYV 186


>gi|171693331|ref|XP_001911590.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946614|emb|CAP73416.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1124

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 74/239 (30%), Gaps = 17/239 (7%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             R         +    FSP+ + VA  + D      + + +       + +      +L+
Sbjct: 823  CRQTLEGHSGSVNSVAFSPDSKWVASGSDDH----TIKIWEAATGSCTQTLEGHGGWVLS 878

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              FS + K    S   D  + I+      + T+ L        S ++SPDS  +   SD 
Sbjct: 879  VAFSPDSKWVA-SGSADSTIKIWEA-ATGSCTQTLEGHGGWVNSVAFSPDSKWVASGSD- 935

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                 + + ++      +  +          +SP    +A      +   I + +     
Sbjct: 936  --DHTIKIWEAATGSCTQTLEGHGGPVNSVTFSPDSKWVA---SGSDDHTIKIWEAATGS 990

Query: 383  ERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                +E     + +  +SP  + +        D+  K++        +TL         
Sbjct: 991  CTQTLEGHGGWVYSVAFSPDSKWVA---SGSADSTIKIWEAATGSCTQTLEGHGGSVKS 1046



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 81/248 (32%), Gaps = 14/248 (5%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG   +++ + +    +           +    FSP+ + VA  + D      + + +
Sbjct: 846  VASGSDDHTIKIWEAATGSCTQTLEGHGGWVLSVAFSPDSKWVASGSADS----TIKIWE 901

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                   + +      + +  FS + K    S   D  + I+      + T+ L      
Sbjct: 902  AATGSCTQTLEGHGGWVNSVAFSPDSKWVA-SGSDDHTIKIWEA-ATGSCTQTLEGHGGP 959

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              S ++SPDS  +   SD      + + ++      +  +      +   +SP    +A 
Sbjct: 960  VNSVTFSPDSKWVASGSD---DHTIKIWEAATGSCTQTLEGHGGWVYSVAFSPDSKWVAS 1016

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                     I + +         +E    ++++   S   + +            + Y I
Sbjct: 1017 GSADST---IKIWEAATGSCTQTLEGHGGSVKSVASSLDSKLIASGSNDTNPPHYQRYGI 1073

Query: 422  DLNGRNET 429
            D++ R  T
Sbjct: 1074 DMSKRWIT 1081



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 81/236 (34%), Gaps = 21/236 (8%)

Query: 219  FSPNQQ--KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FSP +   +  +   + + I    +++   +   + +      + +  FS + K    S 
Sbjct: 791  FSPARSITRGLFTQEERKWITSRPIVEDNWNACRQTLEGHSGSVNSVAFSPDSKWVA-SG 849

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              D  + I+      + T+ L       +S ++SPDS  +   S       + + ++   
Sbjct: 850  SDDHTIKIWEA-ATGSCTQTLEGHGGWVLSVAFSPDSKWVASGS---ADSTIKIWEAATG 905

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQA 394
               +  +          +SP    +A      +   I + +         +E     + +
Sbjct: 906  SCTQTLEGHGGWVNSVAFSPDSKWVA---SGSDDHTIKIWEAATGSCTQTLEGHGGPVNS 962

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
             T+SP  + +        D   K++        +TL      + + A++ D +WV 
Sbjct: 963  VTFSPDSKWVASGSD---DHTIKIWEAATGSCTQTLEGHGGWVYSVAFSPDSKWVA 1015



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 72/232 (31%), Gaps = 14/232 (6%)

Query: 170  KGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             G +   + F  +S  V SG   +++ + +    +           +    FSP+ + VA
Sbjct: 872  HGGWVLSVAFSPDSKWVASGSADSTIKIWEAATGSCTQTLEGHGGWVNSVAFSPDSKWVA 931

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D      + + +       + +      + +  FS + K    S   D  + I+  
Sbjct: 932  SGSDDH----TIKIWEAATGSCTQTLEGHGGPVNSVTFSPDSKWVA-SGSDDHTIKIWEA 986

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                + T+ L        S ++SPDS  +   S       + + ++      +  +    
Sbjct: 987  -ATGSCTQTLEGHGGWVYSVAFSPDSKWVASGS---ADSTIKIWEAATGSCTQTLEGHGG 1042

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            S      S    LIA                D S+  +     N     W P
Sbjct: 1043 SVKSVASSLDSKLIASGSNDTNPPHYQRYGIDMSKRWITKGSENWL---WLP 1091


>gi|326520960|dbj|BAJ92843.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 88/235 (37%), Gaps = 46/235 (19%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS--SNGKRAL 273
            P  S +  K+A+   + + +        R+    +      + + +  ++   +     
Sbjct: 415 FPTISKDGAKLAFVDNEFKAVWLADTQGLRVVYEKR----GSNAVFSTAWNQNPDKDTLY 470

Query: 274 I----SVQKDEAMDIYSV-----DLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +    S    + ++IY++            +RLT+  F N   S +P   + VF S R+G
Sbjct: 471 VCVGPSFSAAKPLEIYAISNASGPSAGRKVQRLTDGNFNNAFPSSNPQGDKFVFRSTRDG 530

Query: 325 K-----EQLYVM------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------ 367
                 + LY+M      + +     R++ D   +     WSP+GD + F+         
Sbjct: 531 GKEKFHKNLYIMEDAEVGEFSEGTVTRLT-DGPWTDTHCSWSPRGDWVVFSSTREMPPSA 589

Query: 368 -------GEKFAIGVMKKD--GSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
                     FA+ ++K     +  R++        ++  P +SP  RS++F+  
Sbjct: 590 PEMAFLDAGYFAVYLVKVSDPTAVVRVVQSSATLAGHVNHPIFSPDMRSIVFASD 644



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 44/127 (34%), Gaps = 14/127 (11%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--------- 324
           ++ ++     +Y  +L    TERLT     ++S + SP    +   + R           
Sbjct: 169 VTKRRTPWTVVYRTNLADGKTERLTPPGQYDVSPAVSPSGKMVAVANFRGNKWTGEIERL 228

Query: 325 KEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGE---KFAIGVMKKDG 380
              + VM  + + Q  + +         P W    ++I F + +GE    +A+       
Sbjct: 229 NTDIAVMNVDKTAQGGLRRKVLIRDGGWPTWGSD-NVIFFHRGTGESPTNWAVFRYDIAT 287

Query: 381 SQERLLV 387
                + 
Sbjct: 288 KATVRVT 294



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 57/171 (33%), Gaps = 35/171 (20%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWS--PQGDL 360
           +  + S D +++ F        +   +    +   R+  +K  S   F   W+  P  D 
Sbjct: 414 VFPTISKDGAKLAFV-----DNEFKAVWLADTQGLRVVYEKRGSNAVFSTAWNQNPDKDT 468

Query: 361 IAF----TKFSGEKFAIGVMK-----KDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKK 410
           +      +  + +   I  +        G + + L +   N   P+ +P G   +F   +
Sbjct: 469 LYVCVGPSFSAAKPLEIYAISNASGPSAGRKVQRLTDGNFNNAFPSSNPQGDKFVFRSTR 528

Query: 411 DG---DTGSKLYSID-------LNGRNETLINTP------AYASDPQWVGF 445
           DG        LY ++         G    L + P      +++    WV F
Sbjct: 529 DGGKEKFHKNLYIMEDAEVGEFSEGTVTRLTDGPWTDTHCSWSPRGDWVVF 579



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/141 (10%), Positives = 38/141 (26%), Gaps = 23/141 (16%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE---------AMD 283
                 V       D   +R+       ++P  S +GK   ++  +             D
Sbjct: 172 RRTPWTVVYRTNLADGKTERLTPPGQYDVSPAVSPSGKMVAVANFRGNKWTGEIERLNTD 231

Query: 284 IYSVDLQ---SNATER--LTNTLFINISASYSPDSSQIVF----ESDREGKEQLYVMQSN 334
           I  +++         R  L          ++  D+  ++F      +      ++     
Sbjct: 232 IAVMNVDKTAQGGLRRKVLIRDGGW---PTWGSDN--VIFFHRGTGESPTNWAVFRYDIA 286

Query: 335 GSDQKRISQDKEASYFDPVWS 355
                R++ +   +      S
Sbjct: 287 TKATVRVTPEAIDAMTPAAIS 307



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 30/92 (32%), Gaps = 16/92 (17%)

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-------GSK 417
           + +           DG  ERL        +P  SPSG+ +  +  +            + 
Sbjct: 172 RRTPWTVVYRTNLADGKTERLTPPGQYDVSPAVSPSGKMVAVANFRGNKWTGEIERLNTD 231

Query: 418 LYSIDLNG------RNETLINTPAYASDPQWV 443
           +  ++++       R + LI    +   P W 
Sbjct: 232 IAVMNVDKTAQGGLRRKVLIRDGGW---PTWG 260


>gi|114778624|ref|ZP_01453440.1| TolB protein, putative [Mariprofundus ferrooxydans PV-1]
 gi|114551089|gb|EAU53650.1| TolB protein, putative [Mariprofundus ferrooxydans PV-1]
          Length = 360

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 94/278 (33%), Gaps = 42/278 (15%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           N R L    S       +     + D AN        D+ L    +  +     Y   + 
Sbjct: 64  NGRFLMTLSSKGKQAWISRRYSENGDPANP---VSDDDRALDSAGWLDDG--HVYYLSER 118

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              L ++   +  +   +RI + R MI  P    +     + +                +
Sbjct: 119 AGGLGLWEKISDGEAMQRRIQSLRGMITQPLLLPDQSIIAVRL---------------KS 163

Query: 294 TERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
             R       N     S   ++  F   S    + ++    S+GS+ K +S        +
Sbjct: 164 ARR-----SNNNDHRISKAGTKESFNNWSFPGFQTEIVRFNSDGSE-KVLSAG-----VN 212

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKK 410
           P  SP G  IAF+  +G    +  M  DGS+   L +  +    P WS  G+ L+F+  +
Sbjct: 213 PALSPDGKWIAFSMATGRSMHLFRMHPDGSELIQLTDSRSEDVQPAWSRDGQWLLFTSNR 272

Query: 411 D-------GDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                         ++ I  NGRN T + + + A D  
Sbjct: 273 SKPDLRHADGGQWDIWRIGTNGRNLTQLTSDS-ARDGA 309



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 85/244 (34%), Gaps = 41/244 (16%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           A+ +SDD         G  +   ++       G+    L     DG  ++    S   ++
Sbjct: 91  ANPVSDD--DRALDSAGWLDDGHVYYLSERAGGLG---LWEKISDGEAMQRRIQSLRGMI 145

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILA-------- 262
            +P   P+Q  +A      +   R    D RI +A  +      +F              
Sbjct: 146 TQPLLLPDQSIIA---VRLKSARRSNNNDHRISKAGTKESFNNWSFPGFQTEIVRFNSDG 202

Query: 263 ----------PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                     P  S +GK    S+    +M ++ +    +   +LT++   ++  ++S D
Sbjct: 203 SEKVLSAGVNPALSPDGKWIAFSMATGRSMHLFRMHPDGSELIQLTDSRSEDVQPAWSRD 262

Query: 313 SSQIVFESDR---------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              ++F S+R          G+  ++ + +NG +  +++ D  A    P     G  + F
Sbjct: 263 GQWLLFTSNRSKPDLRHADGGQWDIWRIGTNGRNLTQLTSDS-ARDGAPSMGLDGK-VYF 320

Query: 364 TKFS 367
               
Sbjct: 321 HSDR 324



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 83/250 (33%), Gaps = 42/250 (16%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQKDEAMDI-YSVD 288
           + +E         T+   + + +          PR S NG+  +    K +   I     
Sbjct: 26  WLNEHRPSQAQQQTQPADSAQLLTLEPRQTEMYPRLSPNGRFLMTLSSKGKQAWISRRYS 85

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--------- 339
              +    +++      SA +  D   + + S+R G   L+   S+G   +         
Sbjct: 86  ENGDPANPVSDDDRALDSAGWLDDG-HVYYLSERAGGLGLWEKISDGEAMQRRIQSLRGM 144

Query: 340 ---------------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQ 382
                          R+   + ++  D   S  G   +F  +S   F   I     DGS 
Sbjct: 145 ITQPLLLPDQSIIAVRLKSARRSNNNDHRISKAGTKESFNNWSFPGFQTEIVRFNSDGS- 203

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPA 435
           E++L    N   P  SP G+ + FS          L+ +  +G     +         PA
Sbjct: 204 EKVLSAGVN---PALSPDGKWIAFSMATG--RSMHLFRMHPDGSELIQLTDSRSEDVQPA 258

Query: 436 YASDPQWVGF 445
           ++ D QW+ F
Sbjct: 259 WSRDGQWLLF 268


>gi|116624929|ref|YP_827085.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228091|gb|ABJ86800.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 893

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 81/204 (39%), Gaps = 12/204 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS +   V   T  ++ +  ++L+D + +  P  +   R     PR S +G R  ++++
Sbjct: 580 TFSKSGMFVYVPTRPEDQLRPIFLIDEKGNSEPLPVAKAR--YGRPRISPDGSRFAVAIR 637

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGS 336
           +  +  I+  + +S    R       +I   ++PD   +VF SD +     +Y M+++G+
Sbjct: 638 EGTSSQIWIYEWRSRRLSRFAFPNGNSIFPVWTPDGKYLVFSSDTQNPGPGIYWMRADGA 697

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP- 395
              +   + +             LI +    G +  + ++  DG+           + P 
Sbjct: 698 GAPQRLVEGQGLVPSSFSPSPPRLI-YGVQGGSQAGLWMLPFDGTDAAHSRPGVPERFPA 756

Query: 396 -------TWSPSGRSLIFSRKKDG 412
                  ++SP GR + +     G
Sbjct: 757 PPMETPASFSPDGRWIAYMGGITG 780



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 97/275 (35%), Gaps = 17/275 (6%)

Query: 160 DDIYQSITGEKGD-FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           D  ++  TG  G  F+   +FV            + ++D  G +     P        PR
Sbjct: 567 DVGFERGTGTAGFTFSKSGMFVYVPTRPEDQLRPIFLIDEKGNSE--PLPVAKARYGRPR 624

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ- 277
            SP+  + A     +    ++++ + R  R   R        + P ++ +GK  + S   
Sbjct: 625 ISPDGSRFA-VAIREGTSSQIWIYEWRSRRLS-RFAFPNGNSIFPVWTPDGKYLVFSSDT 682

Query: 278 KDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           ++    IY +      A +RL     + + +S+SP   ++++      +  L+++  +G+
Sbjct: 683 QNPGPGIYWMRADGAGAPQRLVEGQGL-VPSSFSPSPPRLIYGVQGGSQAGLWMLPFDGT 741

Query: 337 DQKRISQDKEASYFDP------VWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVED 389
           D           +  P       +SP G  IA+         + V    G          
Sbjct: 742 DAAHSRPGVPERFPAPPMETPASFSPDGRWIAYMGGITGIPEVYVRPFPGPGGPWQASAG 801

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               +  WS S   L +  K DG      YS+  +
Sbjct: 802 GA--SAVWSRSAHELFYQSKPDGQLTVVEYSVAGD 834



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 76/200 (38%), Gaps = 21/200 (10%)

Query: 264 RFSSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            FS +G    +  +  D+   I+ +D + N+ E L            SPD S+       
Sbjct: 580 TFSKSGMFVYVPTRPEDQLRPIFLIDEKGNS-EPLPVAKARYGRPRISPDGSRFAVAIRE 638

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDG- 380
               Q+++ +       R +     +   PVW+P G  + F+         I  M+ DG 
Sbjct: 639 GTSSQIWIYEWRSRRLSRFAF-PNGNSIFPVWTPDGKYLVFSSDTQNPGPGIYWMRADGA 697

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR---------NETLI 431
              + LVE   L   ++SPS   LI+     G + + L+ +  +G           E   
Sbjct: 698 GAPQRLVEGQGLVPSSFSPSPPRLIY--GVQGGSQAGLWMLPFDGTDAAHSRPGVPERFP 755

Query: 432 NTP-----AYASDPQWVGFM 446
             P     +++ D +W+ +M
Sbjct: 756 APPMETPASFSPDGRWIAYM 775



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 78/223 (34%), Gaps = 25/223 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  ++ + T   + I++  L   R+D+A            AP FS +GK       
Sbjct: 358 ALSPDGFRLVFVT--GQRIVKPQLALRRLDQAKALPLAGTDGAEAPFFSPDGKSIAFFAD 415

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 +  +D    A   L +        S+  D   IVF +   G   L+ + S G  
Sbjct: 416 G----KLKKMDTAGGAPVTLCDAPS-QREGSWG-DDDNIVFAATNNGG--LWRVASAGGT 467

Query: 338 QKRIS----QDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSN 391
            + ++    Q  E S+  P   P  + + F        + AI V        + LV+   
Sbjct: 468 PEELTKLDKQKGEFSHRYPQVLPGANAVLFMNSPDDSGEGAIEVRSSRTGTRKTLVQTGG 527

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                + PSG  LI+  +        L++  ++     L   P
Sbjct: 528 YGH--YLPSG-HLIYMHR------GSLFAASMDADRLQLTGPP 561



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 73/214 (34%), Gaps = 19/214 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R+  P+ + I   P ++P+ + + +++        +Y M      AP+R+   + ++ + 
Sbjct: 656 RFAFPNGNSI--FPVWTPDGKYLVFSSDTQNPGPGIYWMRADGAGAPQRLVEGQGLVPSS 713

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS--------NATERLTNTLFINISASYSPDSSQ 315
              S   R +  VQ      ++ +               ER      +   AS+SPD   
Sbjct: 714 FSPSP-PRLIYGVQGGSQAGLWMLPFDGTDAAHSRPGVPERFPAPP-METPASFSPDGRW 771

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           I +     G  ++YV    G           A     VWS     + +      +  +  
Sbjct: 772 IAYMGGITGIPEVYVRPFPGPGGP---WQASAGGASAVWSRSAHELFYQSKPDGQLTVVE 828

Query: 376 MKKDGSQ----ERLLVEDSNLQAPTWSPSGRSLI 405
               G         +  ++ +++    P G+ ++
Sbjct: 829 YSVAGDSFSPAPPRMWNNTRVESFDLMPDGKRVL 862



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 66/220 (30%), Gaps = 20/220 (9%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDI 284
           VA+            L  +        +   R   +A   S +G R +  + Q+     +
Sbjct: 322 VAWLWASTRHSAPTVLRLSVDLGDDAALAPMRGTSMA--LSPDGFRLVFVTGQRIVKPQL 379

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
               L       L  T        +SPD   I F +D     +L  M + G     ++  
Sbjct: 380 ALRRLDQAKALPLAGTDGAEA-PFFSPDGKSIAFFAD----GKLKKMDTAGGAP--VTLC 432

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE------DSNLQAPTWS 398
              S  +  W    D I F   +     +  +   G     L +      + + + P   
Sbjct: 433 DAPSQREGSWGDD-DNIVFAATNNGG--LWRVASAGGTPEELTKLDKQKGEFSHRYPQVL 489

Query: 399 PSGRSLIFSRKKDGDTGSKL-YSIDLNGRNETLINTPAYA 437
           P   +++F    D      +       G  +TL+ T  Y 
Sbjct: 490 PGANAVLFMNSPDDSGEGAIEVRSSRTGTRKTLVQTGGYG 529



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 43/127 (33%), Gaps = 10/127 (7%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVM 376
           + S R     +  +  +  D   ++  +  S      SP G  + F       K  + + 
Sbjct: 326 WASTRHSAPTVLRLSVDLGDDAALAPMRGTSM---ALSPDGFRLVFVTGQRIVKPQLALR 382

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           + D ++   L      +AP +SP G+S+ F          KL  +D  G     +     
Sbjct: 383 RLDQAKALPLAGTDGAEAPFFSPDGKSIAFFAD------GKLKKMDTAGGAPVTLCDAPS 436

Query: 437 ASDPQWV 443
             +  W 
Sbjct: 437 QREGSWG 443



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 51/137 (37%), Gaps = 13/137 (9%)

Query: 305 ISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            S + SPD  ++VF    R  K QL + + +    K +          P +SP G  IAF
Sbjct: 355 TSMALSPDGFRLVFVTGQRIVKPQLALRRLD--QAKALPLAGTDGAEAPFFSPDGKSIAF 412

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-D 422
             F+  K  +  M   G     L +  + +  +W      ++F+   +G     L+ +  
Sbjct: 413 --FADGK--LKKMDTAGGAPVTLCDAPSQREGSWGDDDN-IVFAATNNGG----LWRVAS 463

Query: 423 LNGRNETLINTPAYASD 439
             G  E L        +
Sbjct: 464 AGGTPEELTKLDKQKGE 480



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 120/385 (31%), Gaps = 68/385 (17%)

Query: 78  VFNLISQDSFKQKITNPDSIPRFQ----DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            F L         I+  + + +F        ++GA   +           LR+   L D 
Sbjct: 287 QFLLDDAVRLPIAISGSNRLWKFSTIGLAIAAVGAVAWLWASTRHSAPTVLRLSVDLGDD 346

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
                + G     SP  +R +           +TG+      RI+    ++       +L
Sbjct: 347 AALAPMRGTSMALSPDGFRLV----------FVTGQ------RIVKPQLALRRLDQAKAL 390

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +   DGA               P FSP+ + +A+  + D  + ++              
Sbjct: 391 PLAGTDGAEA-------------PFFSPDGKSIAF--FADGKLKKMDTAGGAPVTLCDAP 435

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-----NTLFINISAS 308
                         +    + +   +    ++ V       E LT        F +    
Sbjct: 436 SQREGSWG------DDDNIVFAATNNGG--LWRVASAGGTPEELTKLDKQKGEFSHRYPQ 487

Query: 309 YSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             P ++ ++F +  D  G+  + V  S    +K + Q     ++ P     G LI   + 
Sbjct: 488 VLPGANAVLFMNSPDDSGEGAIEVRSSRTGTRKTLVQTGGYGHYLPS----GHLIYMHR- 542

Query: 367 SGEKFAIGVMKKD----GSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKDGDTGS 416
            G  FA   M  D          ++ED   +        T+S SG   ++   +  D   
Sbjct: 543 -GSLFA-ASMDADRLQLTGPPVPVLEDVGFERGTGTAGFTFSKSG-MFVYVPTRPEDQLR 599

Query: 417 KLYSIDLNGRNETLINTPAYASDPQ 441
            ++ ID  G +E L    A    P+
Sbjct: 600 PIFLIDEKGNSEPLPVAKARYGRPR 624


>gi|304382920|ref|ZP_07365402.1| prolyl oligopeptidase [Prevotella marshii DSM 16973]
 gi|304335945|gb|EFM02193.1| prolyl oligopeptidase [Prevotella marshii DSM 16973]
          Length = 726

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 79/232 (34%), Gaps = 59/232 (25%)

Query: 266 SSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GK+ +  V      +      +Y VD       +LT +     S ++      I + 
Sbjct: 56  SPDGKKVVYQVGYYSVKENRGHQVLYVVDADGRNARQLTVSAKNETSPAWIDGGKHIAYL 115

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----------------- 362
           S+  G  Q++ M ++G++++++++          +SP G  +                  
Sbjct: 116 SNENGTNQVWSMNADGTNRRQLTR-SAVDIEGFKFSPDGKRVILIKQIPYTGSIKPNPSD 174

Query: 363 -------------------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT------- 396
                              +       +   V +   S+ + +++    + P        
Sbjct: 175 LPKSSGILATDLMYRHWDEYVTTIPHPYVAEVTESGISEGKDILDGEPYECPMKPFGGVE 234

Query: 397 ---WSPSGRSLIFS-RKKDGD-----TGSKLYSIDLNGRNETLINTPAYASD 439
              WSP  + + ++ R+K G      T S ++  +L+    T +  PA   +
Sbjct: 235 QLDWSPDSKFIAYTCRRKTGRDYAVSTDSDIFLYELSTGKVTNLCKPADFRE 286



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/305 (13%), Positives = 93/305 (30%), Gaps = 93/305 (30%)

Query: 220 SPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ +KV Y     +  +    +V  +     R  +++        +P +   GK     
Sbjct: 56  SPDGKKVVYQVGYYSVKENRGHQVLYVVDADGRNARQLTVSAKNETSPAWIDGGKHIAYL 115

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFE-------------SD 321
             ++    ++S++       +LT +  ++I    +SPD  +++               SD
Sbjct: 116 SNENGTNQVWSMNADGTNRRQLTRS-AVDIEGFKFSPDGKRVILIKQIPYTGSIKPNPSD 174

Query: 322 REGKEQLYVMQS-----------------NGSDQKRISQDKEASYFDP------------ 352
                 +                          +  IS+ K+    +P            
Sbjct: 175 LPKSSGILATDLMYRHWDEYVTTIPHPYVAEVTESGISEGKDILDGEPYECPMKPFGGVE 234

Query: 353 --VWSPQGDLIAFT--KFSGEKF------AIGVMKKDGSQERLLVEDSNLQA-------- 394
              WSP    IA+T  + +G  +       I + +    +   L + ++ +         
Sbjct: 235 QLDWSPDSKFIAYTCRRKTGRDYAVSTDSDIFLYELSTGKVTNLCKPADFREVAINPTKT 294

Query: 395 ---------------------PTWSPSGRSLIFSRKKDGDTGSK-----LYSIDLNGRNE 428
                                P +SP G+ + +   ++    S      +YS   +G+  
Sbjct: 295 MKTQEVNAPANRQYNMGYDMNPQFSPDGKFIAWQSMENDGYESDRNRLCVYSF-ADGKKT 353

Query: 429 TLINT 433
            + +T
Sbjct: 354 YVSDT 358



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 57/342 (16%), Positives = 103/342 (30%), Gaps = 92/342 (26%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        L V+D DG N R LT S       P +    + +AY + ++    +V+ 
Sbjct: 69  YSVKENRGHQVLYVVDADGRNARQLTVSAKN-ETSPAWIDGGKHIAYLSNENG-TNQVWS 126

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--KDEAMDIYSVDL--QSNAT--- 294
           M+       +++      I   +FS +GKR ++  Q     ++     DL   S      
Sbjct: 127 MNAD-GTNRRQLTRSAVDIEGFKFSPDGKRVILIKQIPYTGSIKPNPSDLPKSSGILATD 185

Query: 295 -------ERLTNTLFI-----------------NISA--------------SYSPDSSQI 316
                  E +T                      +                  +SPDS  I
Sbjct: 186 LMYRHWDEYVTTIPHPYVAEVTESGISEGKDILDGEPYECPMKPFGGVEQLDWSPDSKFI 245

Query: 317 VFESDR--------EGKEQLYVMQSNGSDQKRI--------------------------- 341
            +   R             +++ + +      +                           
Sbjct: 246 AYTCRRKTGRDYAVSTDSDIFLYELSTGKVTNLCKPADFREVAINPTKTMKTQEVNAPAN 305

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQA 394
            Q       +P +SP G  IA+     + +      + V      ++  + +  DSN++ 
Sbjct: 306 RQYNMGYDMNPQFSPDGKFIAWQSMENDGYESDRNRLCVYSFADGKKTYVSDTFDSNVEG 365

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             W+   RSL F           LY  +L G+ + L +  A 
Sbjct: 366 FCWNADSRSLYFIGV--WHACINLYKAELTGKVKQLTDDMAD 405



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 38/96 (39%), Gaps = 9/96 (9%)

Query: 347 ASYFDPVWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSP 399
               +   SP G  + +       K +     + V+  DG   R L   +  + +P W  
Sbjct: 48  GRIGEHQASPDGKKVVYQVGYYSVKENRGHQVLYVVDADGRNARQLTVSAKNETSPAWID 107

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            G+ + +   ++G    +++S++ +G N   +   A
Sbjct: 108 GGKHIAYLSNENGTN--QVWSMNADGTNRRQLTRSA 141



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 398 SPSGRSLIF----SRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWV 443
           SP G+ +++       K+      LY +D +GRN   +   A   + P W+
Sbjct: 56  SPDGKKVVYQVGYYSVKENRGHQVLYVVDADGRNARQLTVSAKNETSPAWI 106


>gi|298244880|ref|ZP_06968686.1| Acylaminoacyl-peptidase [Ktedonobacter racemifer DSM 44963]
 gi|297552361|gb|EFH86226.1| Acylaminoacyl-peptidase [Ktedonobacter racemifer DSM 44963]
          Length = 695

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 98/274 (35%), Gaps = 39/274 (14%)

Query: 183 SVVSGIIKNSLCVMDRD----GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
                 ++++L ++  D                +    P ++P+ +++ + +  + +  +
Sbjct: 38  EREEDTLRSALYLLRLDEQGQAEGEPRQLTRSVKSESFPTWAPDSRRLLFLSDREGEQNQ 97

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---------EAMDIYSVDL 289
           ++L+DT    A K       +  A  +S +G+    +   +             +   + 
Sbjct: 98  LWLIDTDGGEARKLTTMLHGVNEA-TWSPDGRWIAFAASAELEDEDDLLVGLKSLSESER 156

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-------QKRIS 342
           +    ER      +N    Y  D          + +  L+ M + G +        +R++
Sbjct: 157 KKRDEERRYRLRVVND-PDYRSDGRGYY-----DTQAHLFAMPAPGENGSVDPAQIRRLT 210

Query: 343 QDKEASYFDPVWSPQGDLI-AFTKFSGEKF------AIGVMKKDGSQERLLVEDSN-LQA 394
           +     +  PVW+P    I   +    ++F       +  +     +ER L E    +++
Sbjct: 211 R-GRYEHAQPVWTPDSQEIGVLSNRREDRFMGIWVRDLWAIDPVSGEERCLTEGKLAIES 269

Query: 395 PTWSPSGRSLIFSRKKD---GDTGSKLYSIDLNG 425
            +WSP G+  +    +D     + ++LY +   G
Sbjct: 270 FSWSPDGQMAMVVADQDERIARSLARLYLVTRRG 303



 Score = 91.6 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 83/254 (32%), Gaps = 74/254 (29%)

Query: 264 RFSSNGKRALISV--------QKDEAMDIYSVDLQS---NATERLTNTLFINISASYSPD 312
             S +G+R    +            A+ +  +D Q        +LT ++      +++PD
Sbjct: 22  AVSPDGRRVAFEMHYAEREEDTLRSALYLLRLDEQGQAEGEPRQLTRSVKSESFPTWAPD 81

Query: 313 SSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------- 364
           S +++F SDREG + QL+++ ++G + ++++        +  WSP G  IAF        
Sbjct: 82  SRRLLFLSDREGEQNQLWLIDTDGGEARKLTTMLHG-VNEATWSPDGRWIAFAASAELED 140

Query: 365 -----------------------------------KFSGEKF-----AIGVMKKDG---- 380
                                              +  G  +      +  M   G    
Sbjct: 141 EDDLLVGLKSLSESERKKRDEERRYRLRVVNDPDYRSDGRGYYDTQAHLFAMPAPGENGS 200

Query: 381 ---SQERLLVEDSNLQA-PTWSPSGRSLIFSRKKD-----GDTGSKLYSID-LNGRNETL 430
              +Q R L       A P W+P  + +     +      G     L++ID ++G    L
Sbjct: 201 VDPAQIRRLTRGRYEHAQPVWTPDSQEIGVLSNRREDRFMGIWVRDLWAIDPVSGEERCL 260

Query: 431 INTPAYASDPQWVG 444
                      W  
Sbjct: 261 TEGKLAIESFSWSP 274



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 61/352 (17%), Positives = 124/352 (35%), Gaps = 66/352 (18%)

Query: 114 GRVIKEGKDRLRVEFRLW------DVKDRKQIIGK--KFFSSPASWRKIAHTISDDIYQS 165
           G+V      R RV F +       D       + +  +   +    R++  ++  + + +
Sbjct: 19  GQVAVSPDGR-RVAFEMHYAEREEDTLRSALYLLRLDEQGQAEGEPRQLTRSVKSESFPT 77

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
              +      R+LF+S+       +N L ++D DG   R LT     +     +SP+ + 
Sbjct: 78  WAPDS----RRLLFLSDREG---EQNQLWLIDTDGGEARKLTTMLHGVNEA-TWSPDGRW 129

Query: 226 VAYAT---YDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRALISVQKD 279
           +A+A     +DED L V L         KR    R    ++  P + S+G+        D
Sbjct: 130 IAFAASAELEDEDDLLVGLKSLSESERKKRDEERRYRLRVVNDPDYRSDGR-----GYYD 184

Query: 280 EAMDIYSVDLQS-------NATERLTNTLFINISASYSPDSSQIVFESDRE-------GK 325
               ++++               RLT   + +    ++PDS +I   S+R          
Sbjct: 185 TQAHLFAMPAPGENGSVDPAQIRRLTRGRYEHAQPVWTPDSQEIGVLSNRREDRFMGIWV 244

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVMKKDG 380
             L+ +     +++ +++ K A      WSP G +        E+       + ++ + G
Sbjct: 245 RDLWAIDPVSGEERCLTEGKLA-IESFSWSPDGQMAMVVADQDERIARSLARLYLVTRRG 303

Query: 381 SQERLLVEDSNLQA------------------PTWSPSGRSLIFSRKKDGDT 414
           +     +  +                      P WS  G+++ F   + G  
Sbjct: 304 NVGDRTLLLTPDLDLATSAWVGGHFGMPGPYKPQWSHDGQAIYFIASERGQA 355



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 20/118 (16%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKD-----GSQERLLVEDSNLQA- 394
            +      SP G  +AF     E      + A+ +++ D       + R L      ++ 
Sbjct: 16  RTLGQVAVSPDGRRVAFEMHYAEREEDTLRSALYLLRLDEQGQAEGEPRQLTRSVKSESF 75

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGF 445
           PTW+P  R L+F   ++G+   +L+ ID +G     + T         ++ D +W+ F
Sbjct: 76  PTWAPDSRRLLFLSDREGEQN-QLWLIDTDGGEARKLTTMLHGVNEATWSPDGRWIAF 132



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 99/293 (33%), Gaps = 36/293 (12%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
              +G+     +  L+         G+     PA  R++        Y+         + 
Sbjct: 175 YRSDGRGYYDTQAHLF----AMPAPGENGSVDPAQIRRLTRGR----YEHAQPVWTPDSQ 226

Query: 176 RILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            I  +S        GI    L  +D      R LT  +  I     +SP+ Q        
Sbjct: 227 EIGVLSNRREDRFMGIWVRDLWAIDPVSGEERCLTEGKLAIESF-SWSPDGQMAMVVADQ 285

Query: 233 DEDILR----VYLMDTRIDRAPKR--------------IGNFRSMILA--PRFSSNGKRA 272
           DE I R    +YL+  R +   +               +G    M     P++S +G+  
Sbjct: 286 DERIARSLARLYLVTRRGNVGDRTLLLTPDLDLATSAWVGGHFGMPGPYKPQWSHDGQAI 345

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVM 331
                +     +Y +++     ++LT +  I       P    ++   ++     + Y +
Sbjct: 346 YFIASERGQAHVYRLEVVWRTLKKLT-SEGITYYLHLLPGERGLLVAQEQAQHPCEFYRL 404

Query: 332 QSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              G  + KR+++  +    D  W P+ +  ++    GE+    ++   G++E
Sbjct: 405 PLEGEGEPKRLTRLYDDLMRDLTW-PRVEKFSYEGAEGEEIDGWLVYPIGAKE 456


>gi|60682106|ref|YP_212250.1| putative exported aminopeptidase [Bacteroides fragilis NCTC 9343]
 gi|265764242|ref|ZP_06092810.1| prolyl oligopeptidase [Bacteroides sp. 2_1_16]
 gi|60493540|emb|CAH08327.1| putative exported aminopeptidase [Bacteroides fragilis NCTC 9343]
 gi|263256850|gb|EEZ28196.1| prolyl oligopeptidase [Bacteroides sp. 2_1_16]
          Length = 702

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 132/390 (33%), Gaps = 78/390 (20%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDV---KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            G +      +     V +  + V   K  +++       +    R+I HT     YQ  
Sbjct: 55  IGGLAVSPDGKQIAYTVAY--YSVPENKSNREVFVMNADGTDN--RQITHTP----YQEN 106

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                   S++LF+S    +    + L  M+ DG+  + ++     I      SP+ +K+
Sbjct: 107 EVTWAADGSKLLFLS----NDNGSSQLYEMNPDGSGRKQISKYDGDIEGY-SISPDGKKI 161

Query: 227 AY--------------------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---- 262
            +                          D++  +  +         I +F    ++    
Sbjct: 162 LFIAQVKTVKSTADKYPDLDKATGIIITDLMYKHWDEWVTTAPHPFIADFDGKSISNIID 221

Query: 263 ------------P-------RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATE 295
                       P        +++   +   + +K            DIY  DL +  T 
Sbjct: 222 VLEGEPYESPMKPWGGIEQLAWNTTSDKVAYTCRKKTGLAYAISTNSDIYVYDLNTKKTV 281

Query: 296 RLTNTL-FINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASY 349
            +T  +   + +  YSPD   I ++S +R+G    + +L+VM     +++ +S+  +++ 
Sbjct: 282 NITEGMMGYDTNPQYSPDGKSIAWQSMERDGYEADQNRLFVMNLETGEKRFVSKAFDSNV 341

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              VWS     I FT     +  I  +       R +           +  G  LI +++
Sbjct: 342 DAFVWSRDAKTIYFTGVWHGETQIYSLDLANDSVRPVTSGMYDYEGV-ALFGDKLI-AKR 399

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                G ++Y+I L+G+   L        D
Sbjct: 400 HSMSMGDEIYAIALDGQTTQLTQENKQIYD 429



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 86/248 (34%), Gaps = 63/248 (25%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S +GK+   +V      +     +++ ++       ++T+T +     +++ 
Sbjct: 53  GRIGGLAVSPDGKQIAYTVAYYSVPENKSNREVFVMNADGTDNRQITHTPYQENEVTWAA 112

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
           D S+++F S+  G  QLY M  +GS +K+IS+  +        SP G  I F        
Sbjct: 113 DGSKLLFLSNDNGSSQLYEMNPDGSGRKQISKY-DGDIEGYSISPDGKKILFIAQVKTVK 171

Query: 367 -SGEKF---------------------------AIGVMKKDGSQERLLVEDSNLQAPTWS 398
            + +K+                              +   DG     ++ D     P  S
Sbjct: 172 STADKYPDLDKATGIIITDLMYKHWDEWVTTAPHPFIADFDGKSISNII-DVLEGEPYES 230

Query: 399 PS--------------GRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTP--AY 436
           P                  + ++ RKK G      T S +Y  DLN +    I      Y
Sbjct: 231 PMKPWGGIEQLAWNTTSDKVAYTCRKKTGLAYAISTNSDIYVYDLNTKKTVNITEGMMGY 290

Query: 437 ASDPQWVG 444
            ++PQ+  
Sbjct: 291 DTNPQYSP 298


>gi|154936840|emb|CAL30216.1| HET-D [Podospora anserina]
          Length = 1117

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 74/239 (30%), Gaps = 17/239 (7%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             R         +    FSP+ + VA  + D      + + +       + +      +L+
Sbjct: 816  CRQTLEGHSGSVNSVAFSPDSKWVASGSDDH----TIKIWEAATGSCTQTLEGHGGWVLS 871

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              FS + K    S   D  + I+      + T+ L        S ++SPDS  +   SD 
Sbjct: 872  VAFSPDSKWVA-SGSADSTIKIWEA-ATGSCTQTLEGHGGWVNSVAFSPDSKWVASGSD- 928

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                 + + ++      +  +          +SP    +A      +   I + +     
Sbjct: 929  --DHTIKIWEAATGSCTQTLEGHGGPVNSVTFSPDSKWVA---SGSDDHTIKIWEAATGS 983

Query: 383  ERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                +E     + +  +SP  + +        D+  K++        +TL         
Sbjct: 984  CTQTLEGHGGWVYSVAFSPDSKWVA---SGSADSTIKIWEAATGSCTQTLEGHGGSVKS 1039



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 81/248 (32%), Gaps = 14/248 (5%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG   +++ + +    +           +    FSP+ + VA  + D      + + +
Sbjct: 839  VASGSDDHTIKIWEAATGSCTQTLEGHGGWVLSVAFSPDSKWVASGSADS----TIKIWE 894

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                   + +      + +  FS + K    S   D  + I+      + T+ L      
Sbjct: 895  AATGSCTQTLEGHGGWVNSVAFSPDSKWVA-SGSDDHTIKIWEA-ATGSCTQTLEGHGGP 952

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              S ++SPDS  +   SD      + + ++      +  +      +   +SP    +A 
Sbjct: 953  VNSVTFSPDSKWVASGSD---DHTIKIWEAATGSCTQTLEGHGGWVYSVAFSPDSKWVAS 1009

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                     I + +         +E    ++++   S   + +            + Y I
Sbjct: 1010 GSADST---IKIWEAATGSCTQTLEGHGGSVKSVASSLDSKLIASGSNDTNPPHYQRYGI 1066

Query: 422  DLNGRNET 429
            D++ R  T
Sbjct: 1067 DMSKRWIT 1074



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 81/236 (34%), Gaps = 21/236 (8%)

Query: 219  FSPNQQ--KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FSP +   +  +   + + I    +++   +   + +      + +  FS + K    S 
Sbjct: 784  FSPARSITRGLFTQEERKWITSRPIVEDNWNACRQTLEGHSGSVNSVAFSPDSKWVA-SG 842

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              D  + I+      + T+ L       +S ++SPDS  +   S       + + ++   
Sbjct: 843  SDDHTIKIWEA-ATGSCTQTLEGHGGWVLSVAFSPDSKWVASGS---ADSTIKIWEAATG 898

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQA 394
               +  +          +SP    +A      +   I + +         +E     + +
Sbjct: 899  SCTQTLEGHGGWVNSVAFSPDSKWVA---SGSDDHTIKIWEAATGSCTQTLEGHGGPVNS 955

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
             T+SP  + +        D   K++        +TL      + + A++ D +WV 
Sbjct: 956  VTFSPDSKWVASGSD---DHTIKIWEAATGSCTQTLEGHGGWVYSVAFSPDSKWVA 1008



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 72/232 (31%), Gaps = 14/232 (6%)

Query: 170  KGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             G +   + F  +S  V SG   +++ + +    +           +    FSP+ + VA
Sbjct: 865  HGGWVLSVAFSPDSKWVASGSADSTIKIWEAATGSCTQTLEGHGGWVNSVAFSPDSKWVA 924

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D      + + +       + +      + +  FS + K    S   D  + I+  
Sbjct: 925  SGSDDH----TIKIWEAATGSCTQTLEGHGGPVNSVTFSPDSKWVA-SGSDDHTIKIWEA 979

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                + T+ L        S ++SPDS  +   S       + + ++      +  +    
Sbjct: 980  -ATGSCTQTLEGHGGWVYSVAFSPDSKWVASGS---ADSTIKIWEAATGSCTQTLEGHGG 1035

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            S      S    LIA                D S+  +     N     W P
Sbjct: 1036 SVKSVASSLDSKLIASGSNDTNPPHYQRYGIDMSKRWITKGSENWL---WLP 1084


>gi|113476093|ref|YP_722154.1| peptidase C14, caspase catalytic subunit p20 [Trichodesmium
            erythraeum IMS101]
 gi|110167141|gb|ABG51681.1| peptidase C14, caspase catalytic subunit p20 [Trichodesmium
            erythraeum IMS101]
          Length = 1481

 Score = 92.4 bits (228), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 61/318 (19%), Positives = 120/318 (37%), Gaps = 47/318 (14%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWD ++ K++   K            H    D+Y       G         + +  S  
Sbjct: 838  RLWDTENGKELATLK------------HQ--SDVYAVAFSPDGK--------TIATASSD 875

Query: 189  IKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L     D  N + L T +    +    FSP+ + +A A+ D        L DT   
Sbjct: 876  KTARLW----DTENGKELATLNHQSSVNAVAFSPDGKTIATASSDK----TARLWDTENG 927

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 + N +S + A  FS +GK    +   D+   ++  D ++       N      + 
Sbjct: 928  NVLATL-NHQSSVNAVAFSPDGKTIA-TASSDKTARLW--DTENGKELATLNHQSSVNAV 983

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKF 366
            ++SPD   I   +  +   +L+    +  + K ++     S+ +   +SP G  IA T  
Sbjct: 984  AFSPDGKTIA-TASSDKTARLW----DTENGKELATLNHQSWVNAVAFSPDGKTIA-TAS 1037

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            S +   +    ++G+    L   S++ A  +SP G+++  +     D  ++L+  + NG+
Sbjct: 1038 SDKTARLW-DTENGNVLATLNHQSSVNAVAFSPDGKTIATASS---DKTARLWDTE-NGK 1092

Query: 427  NETLINTPAYASDPQWVG 444
                +N  +  +   +  
Sbjct: 1093 ELATLNHQSSVNAVAFSP 1110



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 56/300 (18%), Positives = 110/300 (36%), Gaps = 32/300 (10%)

Query: 129  RLWDVKDRKQIIGKKFFSSPA------SWRKIAHTISDDIYQSITGEKGDFNS------- 175
            RLWD ++ K++      SS          + IA   SD   +    E G   +       
Sbjct: 1084 RLWDTENGKELATLNHQSSVNAVAFSPDGKTIATASSDKTARLWDTENGKELATLNHQDT 1143

Query: 176  -RILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
             R +  S    +        +  + D +  N+      +  ++    FSP+ + +A A+ 
Sbjct: 1144 VRAVAFSPDGKTIATASSDKTARLWDTENGNVLATLNHQSSVIAV-AFSPDGKTIATASS 1202

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D        L DT        + N +S ++A  FS +GK    +   D+   ++  D ++
Sbjct: 1203 DK----TARLWDTENGNVLATL-NHQSSVIAVAFSPDGKTIA-TASSDKTARLW--DTEN 1254

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                   N      + ++SPD   I   SD    +   +  +   +    + + +   F 
Sbjct: 1255 GKVLATLNHQSRVNAVAFSPDGKTIATASD---DKTARLWDTENGNV-LATLNHQDWVFA 1310

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +SP G  IA T  S +   +    ++G+    L     + A  +SP G+++  +   +
Sbjct: 1311 VAFSPDGKTIA-TASSDKTARLW-DTENGNVLATLNHQDWVFAVAFSPDGKTIATASSDN 1368



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 95/227 (41%), Gaps = 18/227 (7%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ + +A A+YD        L DT   +    +   +S + A  FS +GK    +  
Sbjct: 820  AFSPDGKTIATASYDK----TARLWDTENGKELATL-KHQSDVYAVAFSPDGKTIA-TAS 873

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D+   ++  D ++       N      + ++SPD   I   +  +   +L+   +   +
Sbjct: 874  SDKTARLW--DTENGKELATLNHQSSVNAVAFSPDGKTIA-TASSDKTARLW--DTENGN 928

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                + + ++S     +SP G  IA T  S +   +    ++G +   L   S++ A  +
Sbjct: 929  V-LATLNHQSSVNAVAFSPDGKTIA-TASSDKTARLW-DTENGKELATLNHQSSVNAVAF 985

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            SP G+++  +     D  ++L+  + NG+    +N  ++ +   +  
Sbjct: 986  SPDGKTIATASS---DKTARLWDTE-NGKELATLNHQSWVNAVAFSP 1028



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 79/190 (41%), Gaps = 15/190 (7%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +S + A  FS +GK    +   D+   ++  D ++              + ++SPD   
Sbjct: 812 HQSDVYAVAFSPDGKTIA-TASYDKTARLW--DTENGKELATLKHQSDVYAVAFSPDGKT 868

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           I   +  +   +L+    +  + K + + + ++S     +SP G  IA T  S +   + 
Sbjct: 869 IA-TASSDKTARLW----DTENGKELATLNHQSSVNAVAFSPDGKTIA-TASSDKTARLW 922

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              ++G+    L   S++ A  +SP G+++  +     D  ++L+  + NG+    +N  
Sbjct: 923 -DTENGNVLATLNHQSSVNAVAFSPDGKTIATASS---DKTARLWDTE-NGKELATLNHQ 977

Query: 435 AYASDPQWVG 444
           +  +   +  
Sbjct: 978 SSVNAVAFSP 987



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 42/104 (40%), Gaps = 8/104 (7%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPS 400
           +   ++  +   +SP G  IA   +        +    +G +   L   S++ A  +SP 
Sbjct: 809 TLKHQSDVYAVAFSPDGKTIATASYDKTA---RLWDTENGKELATLKHQSDVYAVAFSPD 865

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           G+++  +     D  ++L+  + NG+    +N  +  +   +  
Sbjct: 866 GKTIATASS---DKTARLWDTE-NGKELATLNHQSSVNAVAFSP 905


>gi|171679235|ref|XP_001904564.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939243|emb|CAP64471.1| unnamed protein product [Podospora anserina S mat+]
          Length = 314

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 78/227 (34%), Gaps = 16/227 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + VVSG +  ++ + D                +    FSP+ Q+VA  + D      + +
Sbjct: 19  QRVVSGSLDKTVKIWDTVSGTYTQTLEGHGDWVQSVAFSPDGQRVASGSLDM----TIKI 74

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT      + +      + +  FS +G+R   S   D+ + I+  D  S    + L   
Sbjct: 75  WDTASGTCTQTLEGHGDSVQSVAFSPDGQRVA-SGSVDKTIKIW--DTASGTCTQTLEGH 131

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD  ++   S       + +  +      +  +    S +   +SP G  
Sbjct: 132 GDWVQSVAFSPDGQRVASGSH---DMTVKIWDTASGTCTQTLEGHGDSVWSVAFSPDGQR 188

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
           +A          I +           +E       +  +SP G+ + 
Sbjct: 189 VASGSLD---MTIKIWDTASGTCTQTLEGHGDWVQSVAFSPDGQRVA 232



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 81/266 (30%), Gaps = 33/266 (12%)

Query: 163 YQSITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           Y       GD+   + F    + V SG +  ++ + D                +    FS
Sbjct: 40  YTQTLEGHGDWVQSVAFSPDGQRVASGSLDMTIKIWDTASGTCTQTLEGHGDSVQSVAFS 99

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ Q+VA  + D      + + DT      + +      + +  FS +G+R   S   D 
Sbjct: 100 PDGQRVASGSVDK----TIKIWDTASGTCTQTLEGHGDWVQSVAFSPDGQRVA-SGSHDM 154

Query: 281 AMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + I+  D  S    + L        S ++SPD  ++   S       + +  +      
Sbjct: 155 TVKIW--DTASGTCTQTLEGHGDSVWSVAFSPDGQRVASGSL---DMTIKIWDTASGTCT 209

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGE------------------KFAIGVMKKDGS 381
           +  +          +SP G  +A                            I +      
Sbjct: 210 QTLEGHGDWVQSVAFSPDGQRVASGSHDKTVQSVAFSPDGQRMASGSHDMTIKIWDTASG 269

Query: 382 QERLLVEDSNL--QAPTWSPSGRSLI 405
                +E  +    +  +SP G+ + 
Sbjct: 270 TCTQTLEGHSDSVWSVAFSPDGQRVA 295



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 76/242 (31%), Gaps = 19/242 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   ++   FSP+ Q+V   + D      V + DT      + +      + +  F
Sbjct: 1   TLEGHGDSVWSVAFSPDGQRVVSGSLDK----TVKIWDTVSGTYTQTLEGHGDWVQSVAF 56

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREG 324
           S +G+R   S   D  + I+  D  S    +       ++ S ++SPD  ++   S    
Sbjct: 57  SPDGQRVA-SGSLDMTIKIW--DTASGTCTQTLEGHGDSVQSVAFSPDGQRVASGSV--- 110

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +  +      +  +          +SP G  +A          + +         
Sbjct: 111 DKTIKIWDTASGTCTQTLEGHGDWVQSVAFSPDGQRVASGSHD---MTVKIWDTASGTCT 167

Query: 385 LLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             +E       +  +SP G+ +        D   K++        +TL     +     +
Sbjct: 168 QTLEGHGDSVWSVAFSPDGQRVA---SGSLDMTIKIWDTASGTCTQTLEGHGDWVQSVAF 224

Query: 443 VG 444
             
Sbjct: 225 SP 226



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 59/172 (34%), Gaps = 13/172 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            +       +  ++WD       + + G        ++      ++             +
Sbjct: 145 QRVASGSHDMTVKIWDTASGTCTQTLEGHGDSVWSVAFSPDGQRVASGSLDMTIKI---W 201

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++     ++++              DG   R  + S D+ +    FSP+ Q++A  ++D 
Sbjct: 202 DTASGTCTQTLEGHGDWVQSVAFSPDGQ--RVASGSHDKTVQSVAFSPDGQRMASGSHDM 259

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                + + DT      + +      + +  FS +G+R   S   D+ + I+
Sbjct: 260 ----TIKIWDTASGTCTQTLEGHSDSVWSVAFSPDGQRVA-SGSLDKTIKIW 306


>gi|226226779|ref|YP_002760885.1| putative S9C family peptidase [Gemmatimonas aurantiaca T-27]
 gi|226089970|dbj|BAH38415.1| putative S9C family peptidase [Gemmatimonas aurantiaca T-27]
          Length = 760

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 74/413 (17%), Positives = 138/413 (33%), Gaps = 66/413 (15%)

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSF-KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
           +   V+  V  D +R     +++      Q+ T+P +      W++ G + L        
Sbjct: 94  IAVTVTRAVEADNRRHSEIWVVNAAGGEPQRWTSPSTESSNPRWSADG-KYLFFTSQRAG 152

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSS--PASWRKIAHTISDDIYQSITGEKGDFNSRI 177
           G        RL D    + I    + +   P+         +D    + T    D   ++
Sbjct: 153 GTGN-TWAIRL-DQPSGEAIQVGDYPNGSMPSDGSFAV--FTDAGRPAPTAPSPDPFGQM 208

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
             ++      I + S+     DG ++  ++   + + F P      ++VA   +    I 
Sbjct: 209 QPMARPPFEAITRPSV-SARFDGRHVVDMSYKVNGVGFVP-----GRRVART-WRPTQIA 261

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------------------- 277
           R  + DT      K I +       P  S +GK    +                      
Sbjct: 262 RQPIGDTT----KKVITSTAYSHRGPVVSPDGKWIAFTADSRLRPDSVVDRERDSLATLP 317

Query: 278 ----KDEA----MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQ 327
               +DEA     DIY +D       +LT+ +      ++SPD  QI F     R     
Sbjct: 318 YNKVRDEAERNDADIYIIDANGGTPRKLTDWMGAESQITWSPDGKQIAFIGRPGRTKNSN 377

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG------- 380
           +YV+ + G   + +  + +    +  W P G  I FT   G + A+      G       
Sbjct: 378 IYVVDAAGGTPRALLGNWQYEPGNFDWLPGG--IQFTAEIGGRSAVLRADMSGKSLPTEL 435

Query: 381 -SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            S  R L   S  ++      G++L +         ++L+    +G  E  + 
Sbjct: 436 VSGRRQLRGASYDES------GKTLAYVATSMNKP-TELFVASGDGTGERQLT 481



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 89/285 (31%), Gaps = 61/285 (21%)

Query: 214 LFEPRFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           L  P  SP+ +++A         D+     +++++      P+R  +  +    PR+S++
Sbjct: 82  LSNPAVSPDGKRIAVTVTRAVEADNRRHSEIWVVN-AAGGEPQRWTSPSTESSNPRWSAD 140

Query: 269 GKRALISVQK---DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           GK    + Q+           +D  S    ++ +      + S   D S  VF     G+
Sbjct: 141 GKYLFFTSQRAGGTGNTWAIRLDQPSGEAIQVGDYP----NGSMPSDGSFAVFT--DAGR 194

Query: 326 EQLYVMQSN-GSDQKRISQDKEASYFDPVWSP--QGDLIAFTKF--SGEKF--------- 371
                   +     + +++    +   P  S    G  +    +  +G  F         
Sbjct: 195 PAPTAPSPDPFGQMQPMARPPFEAITRPSVSARFDGRHVVDMSYKVNGVGFVPGRRVART 254

Query: 372 ----AIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFS------------------- 407
                I      D +++ +     + + P  SP G+ + F+                   
Sbjct: 255 WRPTQIARQPIGDTTKKVITSTAYSHRGPVVSPDGKWIAFTADSRLRPDSVVDRERDSLA 314

Query: 408 -------RKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
                  R +     + +Y ID NG     L +     S   W  
Sbjct: 315 TLPYNKVRDEAERNDADIYIIDANGGTPRKLTDWMGAESQITWSP 359



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 80/265 (30%), Gaps = 37/265 (13%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD--- 233
           + FV    V+   + +       G   + +  S       P  SP+ + +A+        
Sbjct: 243 VGFVPGRRVARTWRPTQIARQPIGDTTKKVITSTAYSHRGPVVSPDGKWIAFTADSRLRP 302

Query: 234 ------------------------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
                                    +   +Y++D      P+++ ++        +S +G
Sbjct: 303 DSVVDRERDSLATLPYNKVRDEAERNDADIYIIDAN-GGTPRKLTDWMGAESQITWSPDG 361

Query: 270 KRALISVQ--KDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKE 326
           K+     +  + +  +IY VD         L N  +   +  + P   Q  F ++  G+ 
Sbjct: 362 KQIAFIGRPGRTKNSNIYVVDAAGGTPRALLGNWQYEPGNFDWLPGGIQ--FTAEIGGRS 419

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERL 385
            +     +G                  +   G  +A+   S  +   + V   DG+ ER 
Sbjct: 420 AVLRADMSGKSLPTELVSGRRQLRGASYDESGKTLAYVATSMNKPTELFVASGDGTGERQ 479

Query: 386 LVEDSNL--QAPTWSPSGRSLIFSR 408
           L   +        WS     + +  
Sbjct: 480 LTNFNKDVNADVVWS-DAERITYKS 503



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 73/205 (35%), Gaps = 7/205 (3%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DIL 237
           +      +      + ++D +G   R LT        +  +SP+ +++A+          
Sbjct: 318 YNKVRDEAERNDADIYIIDANGGTPRKLTDW-MGAESQITWSPDGKQIAFIGRPGRTKNS 376

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TER 296
            +Y++D         +GN++       +   G     + +      +   D+   +    
Sbjct: 377 NIYVVDAAGGTPRALLGNWQYEPGNFDWLPGG--IQFTAEIGGRSAVLRADMSGKSLPTE 434

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           L +       ASY      + + +    K  +L+V   +G+ +++++   +    D VWS
Sbjct: 435 LVSGRRQLRGASYDESGKTLAYVATSMNKPTELFVASGDGTGERQLTNFNKDVNADVVWS 494

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDG 380
              + I +      +    +MK  G
Sbjct: 495 -DAERITYKSVGNLEIEGWLMKPYG 518



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 47/117 (40%), Gaps = 13/117 (11%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQA-P 395
             + A+  +P  SP G  IA T              I V+   G + +     S   + P
Sbjct: 76  WYRVANLSNPAVSPDGKRIAVTVTRAVEADNRRHSEIWVVNAAGGEPQRWTSPSTESSNP 135

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYA--SDPQWVGFMD 447
            WS  G+ L F+ ++ G TG   ++I L+   G    + + P  +  SD  +  F D
Sbjct: 136 RWSADGKYLFFTSQRAGGTG-NTWAIRLDQPSGEAIQVGDYPNGSMPSDGSFAVFTD 191


>gi|170725280|ref|YP_001759306.1| transcriptional regulator CadC [Shewanella woodyi ATCC 51908]
 gi|169810627|gb|ACA85211.1| transcriptional regulator, CadC [Shewanella woodyi ATCC 51908]
          Length = 725

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 101/323 (31%), Gaps = 73/323 (22%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            + F    +     +  L  +   G    Y           P FSP+  K+AY +++   
Sbjct: 206 YLTFAKRKLGEKNWRVGLMTL---GNRKTYFLDDPFDSQSYPAFSPDGSKIAYLSFNRGG 262

Query: 236 ILRVYLMDTRIDRAPK--RIGNFRSMILAP--RFSSNGKRALISVQKDE-----AMDIYS 286
             ++ +++       +  +I + +S+I +    +  +GK    + +  +        I+S
Sbjct: 263 GCQINVVEVSEGEFGEISKITDCKSIIRSTSIAWHPSGKSIYYTDEDHQKEFLSEKMIFS 322

Query: 287 VDLQSNATERLTNTLFI---NISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRIS 342
           +D+     ++L+    I   + S S SP+   +    D    K Q+ ++     + +++ 
Sbjct: 323 IDITGKNKKQLSQPYSIGGGDYSISLSPNGRYLAVVRDVHWYKVQIMLLSLETGNWQKL- 381

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-------------------VMKKDG--- 380
              E +     WS   + I +                              +   +G   
Sbjct: 382 FPLELALHSVAWSGDSESIIYRGKGNHLMRYNIELGEHIQITNILQPILSPISNPNGDIV 441

Query: 381 --------SQERLL------------------------VEDSNLQAPTWSPSGRSLIFSR 408
                    + R L                          + +   P+ S  G+ L F  
Sbjct: 442 AVLGKLFDGEIRKLNDSFDEPRDSSLFVNSKPVDKHYITSNGSDSRPSVSLDGKKLAFVS 501

Query: 409 KKDGDTGSKLYSIDLNGRNETLI 431
            + G+  S+++    +G    L 
Sbjct: 502 TRTGE--SQIWLKSQDGTERQLT 522



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 78/211 (36%), Gaps = 18/211 (8%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISAS 308
           KR+       L+P  SS+GK    + +K       +  + L +  T  L +        +
Sbjct: 186 KRLTYLDGQELSPMLSSDGKYLTFAKRKLGEKNWRVGLMTLGNRKTYFLDDPFDSQSYPA 245

Query: 309 YSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDLIAF 363
           +SPD S+I + S +R G  Q+ V++ +  +   IS+  +           W P G  I +
Sbjct: 246 FSPDGSKIAYLSFNRGGGCQINVVEVSEGEFGEISKITDCKSIIRSTSIAWHPSGKSIYY 305

Query: 364 TKFSGEK-----FAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDT 414
           T    +K       I  +   G  ++ L +         + + SP+GR L   R      
Sbjct: 306 TDEDHQKEFLSEKMIFSIDITGKNKKQLSQPYSIGGGDYSISLSPNGRYLAVVRDVHW-Y 364

Query: 415 GSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
             ++  + L  G  + L           W G
Sbjct: 365 KVQIMLLSLETGNWQKLFPLELALHSVAWSG 395



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 87/238 (36%), Gaps = 21/238 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D     P  S + + + +A     +      + T  +R    + +       P FS +G 
Sbjct: 192 DGQELSPMLSSDGKYLTFAKRKLGEKNWRVGLMTLGNRKTYFLDDPFDSQSYPAFSPDGS 251

Query: 271 RALI-SVQKDEAMDIYSVDL---QSNATERLTNTLFI--NISASYSPDSSQIVFESDREG 324
           +    S  +     I  V++   +     ++T+   I  + S ++ P    I +  D + 
Sbjct: 252 KIAYLSFNRGGGCQINVVEVSEGEFGEISKITDCKSIIRSTSIAWHPSGKSIYYT-DEDH 310

Query: 325 KEQ------LYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGE-KFAIGV 375
           +++      ++ +   G ++K++SQ        +    SP G  +A  +     K  I +
Sbjct: 311 QKEFLSEKMIFSIDITGKNKKQLSQPYSIGGGDYSISLSPNGRYLAVVRDVHWYKVQIML 370

Query: 376 MKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +  +    + L        +  WS    S+I+   +        Y+I+L G +  + N
Sbjct: 371 LSLETGNWQKLFPLELALHSVAWSGDSESIIY---RGKGNHLMRYNIEL-GEHIQITN 424



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 68/155 (43%), Gaps = 13/155 (8%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASY 349
              +RLT      +S   S D   + F   + G    ++ +M   G+ +     D   S 
Sbjct: 183 TELKRLTYLDGQELSPMLSSDGKYLTFAKRKLGEKNWRVGLMTL-GNRKTYFLDDPFDSQ 241

Query: 350 FDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGR 402
             P +SP G  IA+  F  G    I V++    +   + + ++ +      +  W PSG+
Sbjct: 242 SYPAFSPDGSKIAYLSFNRGGGCQINVVEVSEGEFGEISKITDCKSIIRSTSIAWHPSGK 301

Query: 403 SLIFS---RKKDGDTGSKLYSIDLNGRNETLINTP 434
           S+ ++    +K+  +   ++SID+ G+N+  ++ P
Sbjct: 302 SIYYTDEDHQKEFLSEKMIFSIDITGKNKKQLSQP 336



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 86/252 (34%), Gaps = 34/252 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  + ++  +  N + L P  +  L    +S + + + Y          +   +  +  
Sbjct: 364 YKVQIMLLSLETGNWQKLFP-LELALHSVAWSGDSESIIY----RGKGNHLMRYNIELGE 418

Query: 249 APKRIGNFRSMILAPRFSSNGKRAL----------------ISVQKDEAMDIYSVDLQSN 292
             + I N    IL+P  + NG                        +D ++ + S  +   
Sbjct: 419 HIQ-ITNILQPILSPISNPNGDIVAVLGKLFDGEIRKLNDSFDEPRDSSLFVNSKPVD-- 475

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             +    +   +   S S D  ++ F S R G+ Q+++   +G++ ++++  K+ ++   
Sbjct: 476 --KHYITSNGSDSRPSVSLDGKKLAFVSTRTGESQIWLKSQDGTE-RQLTYFKDINFIRH 532

Query: 353 -VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRK 409
             +S  G  I             +     +    +      +     W P  +++I S  
Sbjct: 533 ISFSGDGTKI----LGRNNHQAFIYDLTTNTVHFIDIQGEHELFNVAWGPDKKTIIASFD 588

Query: 410 KDGDTGSKLYSI 421
             G +  +L  I
Sbjct: 589 ILGRSSLRLVDI 600



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 65/177 (36%), Gaps = 16/177 (9%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPD 312
                   P  S +GK+      +     I+    Q     +LT    IN     S+S D
Sbjct: 480 TSNGSDSRPSVSLDGKKLAFVSTRTGESQIWLKS-QDGTERQLTYFKDINFIRHISFSGD 538

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            ++I+    R    Q ++     +    I    E   F+  W P    I  +     + +
Sbjct: 539 GTKIL---GRN-NHQAFIYDLTTNTVHFIDIQGEHELFNVAWGPDKKTIIASFDILGRSS 594

Query: 373 IGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           + ++     Q   +L E+  ++   +S +G+     R KDG     L++I+ NG  +
Sbjct: 595 LRLVDIKSGQISDVLAEE--VEFGQFSNTGQLYFIKRAKDG-----LWTIE-NGETK 643



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 7/70 (10%)

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAY 436
           RL   D    +P  S  G+ L F+++K G+   ++  + L  R    ++        PA+
Sbjct: 187 RLTYLDGQELSPMLSSDGKYLTFAKRKLGEKNWRVGLMTLGNRKTYFLDDPFDSQSYPAF 246

Query: 437 ASDPQWVGFM 446
           + D   + ++
Sbjct: 247 SPDGSKIAYL 256


>gi|146293825|ref|YP_001184249.1| peptidase S41 [Shewanella putrefaciens CN-32]
 gi|145565515|gb|ABP76450.1| peptidase S41 [Shewanella putrefaciens CN-32]
          Length = 1094

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 113/297 (38%), Gaps = 36/297 (12%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---- 228
           +  R+ F+S+S  +      L     DG++ + LT  +D  +   R   +Q KV +    
Sbjct: 226 WQDRLYFISDSDGNDN----LWSSALDGSDAKQLTQFKDWQVRGARM--DQGKVVFQLGA 279

Query: 229 ------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                      + +L + L     +R    + +      +   +  G + +I+ +     
Sbjct: 280 DIHVFDIAAAKDSLLNIELTSDFAERREHWVKDPMDYASSTNLAPAGDKVVITAR----S 335

Query: 283 DIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKR 340
            +    +  +   ++     +    A  S D   +   SD  G+++++   ++GS   K+
Sbjct: 336 HVAIAGIDGSRLVQVALPGTYRVREAVLSQDGKSVYAISDMTGQQEIWQFPADGSSGAKQ 395

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
           +++D          S  G  IA     G    + ++    +  + ++ +     P     
Sbjct: 396 LTKDGHTLRMSLNLSSDGRFIAHDDNDG---NVWLLDLKKNTNQKIITNGEGLGPYADIC 452

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLIN------TPAYASDPQWVGFM 446
           WS   R +  ++ + G    ++    ++  + ETL +      +P ++SD QW+ F+
Sbjct: 453 WSSDSRFIALTKSEIGKQRPQIVLYSVDENKAETLTSDKYESYSPTFSSDGQWLYFL 509



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 68/199 (34%), Gaps = 15/199 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P   KV            V +      R  +        +     S +GK         
Sbjct: 323 APAGDKVVITARSH-----VAIAGIDGSRLVQVALPGTYRVREAVLSQDGKSVYAISDMT 377

Query: 280 EAMDIYSVDLQSN-ATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              +I+      +   ++LT +   + +S + S D     F +  +    ++++    + 
Sbjct: 378 GQQEIWQFPADGSSGAKQLTKDGHTLRMSLNLSSDGR---FIAHDDNDGNVWLLDLKKNT 434

Query: 338 QKRISQDKEA--SYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVED-SNL 392
            ++I  + E    Y D  WS     IA TK     ++  I +   D ++   L  D    
Sbjct: 435 NQKIITNGEGLGPYADICWSSDSRFIALTKSEIGKQRPQIVLYSVDENKAETLTSDKYES 494

Query: 393 QAPTWSPSGRSLIFSRKKD 411
            +PT+S  G+ L F   + 
Sbjct: 495 YSPTFSSDGQWLYFLSNRQ 513



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 111/283 (39%), Gaps = 27/283 (9%)

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSPAS 150
           ++   + +F+DW   GA++   G+V+     +L  +  ++D+   K  ++  +  S  A 
Sbjct: 250 SDAKQLTQFKDWQVRGARMD-QGKVVF----QLGADIHVFDIAAAKDSLLNIELTSDFAE 304

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R+            +       +S  L  +   V    ++ + +   DG+ +  +    
Sbjct: 305 RRE----------HWVKDPMDYASSTNLAPAGDKVVITARSHVAIAGIDGSRLVQVALPG 354

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNG 269
              + E   S + + V YA  D      ++          K++  +  ++ ++   SS+G
Sbjct: 355 TYRVREAVLSQDGKSV-YAISDMTGQQEIWQFPADGSSGAKQLTKDGHTLRMSLNLSSDG 413

Query: 270 KRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISA--SYSPDSSQIVFESDREGK- 325
           +        D   +++ +DL+ N  ++ +TN   +   A   +S DS  I       GK 
Sbjct: 414 RFIA---HDDNDGNVWLLDLKKNTNQKIITNGEGLGPYADICWSSDSRFIALTKSEIGKQ 470

Query: 326 -EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             Q+ +   + +  + ++ DK  SY  P +S  G  + F    
Sbjct: 471 RPQIVLYSVDENKAETLTSDKYESY-SPTFSSDGQWLYFLSNR 512



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 73/206 (35%), Gaps = 26/206 (12%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           + +    AP      +  + + + D    +++  L   A  RLT+     + A+ S D  
Sbjct: 29  SNQGYYRAPALH--NQTLVFTAEGD----LWTQTLGQKAATRLTSLPAEELGATISADGK 82

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            + + ++ EG  ++YV+   G   KR+S +  +      W+ +GD I ++  +G   A  
Sbjct: 83  WVAYVANYEGASEVYVIPITGGVAKRVSFE-NSRVRVQGWTAKGD-ILYSTDTGFGPANN 140

Query: 375 VMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRK-----------KDGDTGSKLYS 420
            M +    + L   D   ++            + F+R              G    +L+ 
Sbjct: 141 WMLRSVDPQTLTTTDLPLADAVEGVIDDRNEYVYFTRFGLQVTGDNAKVYRGGAKGELWR 200

Query: 421 IDLNGRNETLI---NTPAYASDPQ-W 442
             L  + E  +           P  W
Sbjct: 201 FKLGSKTEAQLLSGQHDGSVRQPMLW 226



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 68/208 (32%), Gaps = 20/208 (9%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              T   +A  R+ +  +  L    S++GK        + A ++Y + +     +R++  
Sbjct: 53  WTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVYVIPITGGVAKRVSFE 112

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   ++     +       G    ++++S        +    A   + V   + + 
Sbjct: 113 NSRVRVQGWTAKGDILYSTDTGFGPANNWMLRSVDPQTLTTTDLPLADAVEGVIDDRNEY 172

Query: 361 IAFTKF-------------SGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSL 404
           + FT+F              G K  +   K     E  L+    D +++ P        L
Sbjct: 173 VYFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQD--RL 230

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            F    DG     L+S  L+G +   + 
Sbjct: 231 YFISDSDG--NDNLWSSALDGSDAKQLT 256



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 68/213 (31%), Gaps = 25/213 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G        S          S + + VAY   + E    VY++        KR+    S 
Sbjct: 58  GQKAATRLTSLPAEELGATISADGKWVAYVA-NYEGASEVYVIPI-TGGVAKRVSFENSR 115

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQI 316
           +    +++ G   L S           + L+S   + LT T   L   +       +  +
Sbjct: 116 VRVQGWTAKGD-ILYSTDTGFGPANNWM-LRSVDPQTLTTTDLPLADAVEGVIDDRNEYV 173

Query: 317 VFES------------DREG-KEQLYVMQSNG-SDQKRISQDKEASYFDPV-WSPQGDLI 361
            F               R G K +L+  +    ++ + +S   + S   P+ W    D +
Sbjct: 174 YFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQ---DRL 230

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            F   S     +     DGS  + L +  + Q 
Sbjct: 231 YFISDSDGNDNLWSSALDGSDAKQLTQFKDWQV 263



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 57/176 (32%), Gaps = 25/176 (14%)

Query: 275 SVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +     +++   L S    +L                D  ++ F SD +G + L+   
Sbjct: 189 VYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQD--RLYFISDSDGNDNLWSSA 246

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            +GSD K+++Q K+          QG ++         F I   K D      L  D   
Sbjct: 247 LDGSDAKQLTQFKDWQVRGARM-DQGKVVFQLGADIHVFDIAAAK-DSLLNIELTSDFAE 304

Query: 393 QAPTW-------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +   W             +P+G  ++ + +      S +    ++G     +  P 
Sbjct: 305 RREHWVKDPMDYASSTNLAPAGDKVVITAR------SHVAIAGIDGSRLVQVALPG 354


>gi|94969743|ref|YP_591791.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551793|gb|ABF41717.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 919

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 57/300 (19%), Positives = 112/300 (37%), Gaps = 22/300 (7%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             KQ+    +    A  R+    I++D+    T   G        V+       I +++ 
Sbjct: 604 RNKQVFLVSY--PDAQVRR----ITNDLNGYGTSSFGMTADDSTIVTIQ---NAITSNIF 654

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V D +G+N + LT   DQI      +    K+AY +           +       P  + 
Sbjct: 655 VSDLNGSNAKQLTQ--DQIAGTQGVAGGSGKIAYNSDASG--TSSMWVTDENGGTPVLVS 710

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             +     P  S +GK        D  ++I+  D   N    LT++   +++  +  D+ 
Sbjct: 711 PPKDFTQTPTMSPDGKHVAYLCLHDNKLNIWVADTDGNNIRALTSSNA-DLNPIFG-DND 768

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFA 372
            + ++    G+ Q   +  +G +  ++S            S +GD +    F     K  
Sbjct: 769 TVYYQHIDNGRIQYNRISLSGGEPTKVSSLHLVYLRP---SHKGDRLFVDYFDDAVSKAR 825

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           IG+M K+G              P WSP   +++++   +  T   ++ +DLNG++   + 
Sbjct: 826 IGIMSKEGKILNTFEMPVTSSNPIWSPDDTAILYTNTVNNIT--NIWKMDLNGQHPQQLT 883



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 51/283 (18%), Positives = 100/283 (35%), Gaps = 14/283 (4%)

Query: 158 ISDDIYQSITGEKGDFNSR----ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           IS  + +   G  G   S     I     +  S      + V+D  G     +     Q+
Sbjct: 522 ISSKVGEQWFGGSGLSWSADGKLIAVPLITNDSEGYHEGVGVVDMAGKLTPLIPKLSGQV 581

Query: 214 LFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF--SSNGK 270
                +  +   + + A+       +   + +  D   +RI N  +      F  +++  
Sbjct: 582 GRMI-WLNDGSGLVFPASLAIGSRNKQVFLVSYPDAQVRRITNDLNGYGTSSFGMTADDS 640

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             + ++Q     +I+  DL  +  ++LT           +  S +I + SD  G   ++V
Sbjct: 641 TIV-TIQNAITSNIFVSDLNGSNAKQLTQDQIAGTQGV-AGGSGKIAYNSDASGTSSMWV 698

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
              NG     +S  K+ +   P  SP G  +A+      K  I V   DG+  R L   +
Sbjct: 699 TDENGGTPVLVSPPKDFTQT-PTMSPDGKHVAYLCLHDNKLNIWVADTDGNNIRALTSSN 757

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
               P +     ++ +    +G        I L+G   T +++
Sbjct: 758 ADLNPIFG-DNDTVYYQHIDNGRIQYN--RISLSGGEPTKVSS 797



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 85/240 (35%), Gaps = 17/240 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             +  ++      SP+ + V Y   +      ++L       + K + +         FS
Sbjct: 386 LTNSGRVDGGTSISPDGKYVVYQMIEGGKS-SLWLRQIVTSSSVKLLPDSDIGYGPTTFS 444

Query: 267 SNGKRALISVQKDEAMD-IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--RE 323
            +G     + Q  +A D +Y V       +++ +   IN   ++SPD  Q  F  +  +E
Sbjct: 445 PDGNFVYFTQQNSDAPDSLYVVPTLGGTPKKIFDN--INGPIAFSPDGKQFAFVRELVKE 502

Query: 324 GKEQLYVMQ-SNGSDQKRISQDKEASYFDP----VWSPQGDLIAF--TKFSGEKFA--IG 374
           G   + +   ++GS  K +   K    +       WS  G LIA        E +   +G
Sbjct: 503 GLSTIAIANTADGSVVKTVISSKVGEQWFGGSGLSWSADGKLIAVPLITNDSEGYHEGVG 562

Query: 375 VMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF-SRKKDGDTGSKLYSIDLNGRNETLIN 432
           V+   G    L+ +    +    W   G  L+F +    G    +++ +         I 
Sbjct: 563 VVDMAGKLTPLIPKLSGQVGRMIWLNDGSGLVFPASLAIGSRNKQVFLVSYPDAQVRRIT 622



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 77/228 (33%), Gaps = 17/228 (7%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            +  + + +          + +R+ N   +      S +GK  +  + +     ++   +
Sbjct: 363 YFGFKKLSQKPAGTPGQQMSIERLTNSGRVDGGTSISPDGKYVVYQMIEGGKSSLWLRQI 422

Query: 290 QSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEA 347
            ++++ +L     I     ++SPD + + F          LYV+ + G   K+I  +   
Sbjct: 423 VTSSSVKLLPDSDIGYGPTTFSPDGNFVYFTQQNSDAPDSLYVVPTLGGTPKKIFDNING 482

Query: 348 SYFDPVWSPQGDLIAFTK--FSGEKFAIGVMK-KDGSQERLLVEDSNLQAP------TWS 398
                 +SP G   AF +         I +    DGS  + ++     +        +WS
Sbjct: 483 ---PIAFSPDGKQFAFVRELVKEGLSTIAIANTADGSVVKTVISSKVGEQWFGGSGLSWS 539

Query: 399 PSGRSLI--FSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWV 443
             G+ +               +  +D+ G+   LI           W+
Sbjct: 540 ADGKLIAVPLITNDSEGYHEGVGVVDMAGKLTPLIPKLSGQVGRMIWL 587



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/336 (14%), Positives = 106/336 (31%), Gaps = 76/336 (22%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +V   ++ G  K+SL +     ++   L P  D       FSP+   V +   + +    
Sbjct: 404 YVVYQMIEG-GKSSLWLRQIVTSSSVKLLPDSDIGYGPTTFSPDGNFVYFTQQNSDAPDS 462

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSNAT-- 294
           +Y++ T      K   N    I    FS +GK+      + K+    I   +    +   
Sbjct: 463 LYVVPTLGGTPKKIFDNINGPI---AFSPDGKQFAFVRELVKEGLSTIAIANTADGSVVK 519

Query: 295 ----ERLTNTLFINISASYSPDSS------------------------------------ 314
                ++    F     S+S D                                      
Sbjct: 520 TVISSKVGEQWFGGSGLSWSADGKLIAVPLITNDSEGYHEGVGVVDMAGKLTPLIPKLSG 579

Query: 315 ---QIVFESDREG------------KEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQ 357
              ++++ +D  G             +Q++++    +  +RI+ D     +    + +  
Sbjct: 580 QVGRMIWLNDGSGLVFPASLAIGSRNKQVFLVSYPDAQVRRITNDLNGYGTSSFGMTADD 639

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             ++     +     I V   +GS  + L +D        +     + ++    G   S 
Sbjct: 640 STIVTI--QNAITSNIFVSDLNGSNAKQLTQDQIAGTQGVAGGSGKIAYNSDASGT--SS 695

Query: 418 LYSIDLNGRNETLIN-------TPAYASDPQWVGFM 446
           ++  D NG    L++       TP  + D + V ++
Sbjct: 696 MWVTDENGGTPVLVSPPKDFTQTPTMSPDGKHVAYL 731



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 68/175 (38%), Gaps = 10/175 (5%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K ++ V D DG NIR LT S       P F  +   V Y   D+  I   Y   +     
Sbjct: 737 KLNIWVADTDGNNIRALTSSN--ADLNPIF-GDNDTVYYQHIDNGRIQ--YNRISLSGGE 791

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS--A 307
           P ++ +   + L P  S  G R  +    D+A+    + + S   + L        S   
Sbjct: 792 PTKVSSLHLVYLRP--SHKGDRLFVDYF-DDAVSKARIGIMSKEGKILNTFEMPVTSSNP 848

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +SPD + I++ +       ++ M  NG   ++++   +   F     P G L+ 
Sbjct: 849 IWSPDDTAILYTNTVNNITNIWKMDLNGQHPQQLTHYDKDMIFSYWVLPNGKLLM 903


>gi|261404435|ref|YP_003240676.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Paenibacillus sp. Y412MC10]
 gi|261280898|gb|ACX62869.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Paenibacillus sp. Y412MC10]
          Length = 666

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 90/285 (31%), Gaps = 57/285 (20%)

Query: 210 RDQILFEPRFSPNQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           R   + +P  SP    +AY      +  D  R ++                     P +S
Sbjct: 14  RMHWVNDPVVSPASGAIAYVHKSVSEKHDGYRSHIRLLPAGGDQDIPFTSGEADAVPAWS 73

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------- 317
            +G       +K +   ++ +          T+      +  +SPDSS+++         
Sbjct: 74  PDGSELAFLRKKGDKPQVWIMPANGGEARPATDLKHGVSAFKWSPDSSRLLVRSEAEAAE 133

Query: 318 -------------------------FESDREG-----KEQLYVMQSNGSDQKRISQDKEA 347
                                    +++D  G     +  L+++     + K I+ + + 
Sbjct: 134 STESEEKDKDDKHKLPEEKIINRIKYKADGPGLWNDRRHHLFIVNPATEECKPIT-EGDF 192

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKF----------AIGVMKKDGSQERLLVEDSN-LQAPT 396
             +   WSP G  IA++     +            + VM         + + +  + +  
Sbjct: 193 DVYAFAWSPDGGSIAYSSTLATEHFPDPDLRLTNDVFVMDLSSGSVTEITDGTLSIGSIA 252

Query: 397 WSPSGRSLIFSRKK---DGDTGSKLYSIDLNGRNETLINTPAYAS 438
           ++P G+ ++           T +K++ + L+G    ++ T     
Sbjct: 253 FTPDGQHVLMLASDLSCGFATLTKIHLVPLSGGEARVLFTDMDVQ 297



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 115/362 (31%), Gaps = 83/362 (22%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           +  K+  +    +R   H ++D +           +  I +V +SV          +   
Sbjct: 1   MTDKRLITPEDLYRM--HWVNDPVVS-------PASGAIAYVHKSVSEKHDGYRSHIRLL 51

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
                + +  +  +    P +SP+  ++A+      D  +V++M        +   + + 
Sbjct: 52  PAGGDQDIPFTSGEADAVPAWSPDGSELAFLR-KKGDKPQVWIMPAN-GGEARPATDLKH 109

Query: 259 MILAPRFSSNGKRALIS---------------------------------------VQKD 279
            + A ++S +  R L+                                        +  D
Sbjct: 110 GVSAFKWSPDSSRLLVRSEAEAAESTESEEKDKDDKHKLPEEKIINRIKYKADGPGLWND 169

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----------DREGKEQLY 329
               ++ V+  +   + +T   F   + ++SPD   I + S          D      ++
Sbjct: 170 RRHHLFIVNPATEECKPITEGDFDVYAFAWSPDGGSIAYSSTLATEHFPDPDLRLTNDVF 229

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQER 384
           VM  +      I+ D   S     ++P G  +                I ++   G + R
Sbjct: 230 VMDLSSGSVTEIT-DGTLSIGSIAFTPDGQHVLMLASDLSCGFATLTKIHLVPLSGGEAR 288

Query: 385 LLVED----------SNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +L  D          S+++A       +S  GRS+     +DG  G  +    L+G    
Sbjct: 289 VLFTDMDVQLGHAAVSDMRAGAGTPLLFSKDGRSVYVQLSQDG--GVHIGRFALDGSTFE 346

Query: 430 LI 431
           L+
Sbjct: 347 LV 348



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 77/270 (28%), Gaps = 66/270 (24%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                K  + +M  +G   R  T  +  +    ++SP+  ++   +  +           
Sbjct: 83  RKKGDKPQVWIMPANGGEARPATDLKHGVSAF-KWSPDSSRLLVRSEAEAAESTESEEKD 141

Query: 245 RIDRAP-------------------------------------KRIGNFRSMILAPRFSS 267
           + D+                                       K I      + A  +S 
Sbjct: 142 KDDKHKLPEEKIINRIKYKADGPGLWNDRRHHLFIVNPATEECKPITEGDFDVYAFAWSP 201

Query: 268 NGKRALISVQ------KDEAM----DIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +G     S         D  +    D++ +DL S +   +T+      S +++PD   ++
Sbjct: 202 DGGSIAYSSTLATEHFPDPDLRLTNDVFVMDLSSGSVTEITDGTLSIGSIAFTPDGQHVL 261

Query: 318 F-ESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-------------QGD 359
              SD         +++++  +G + + +  D +        S               G 
Sbjct: 262 MLASDLSCGFATLTKIHLVPLSGGEARVLFTDMDVQLGHAAVSDMRAGAGTPLLFSKDGR 321

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +           IG    DGS   L+V  
Sbjct: 322 SVYVQLSQDGGVHIGRFALDGSTFELVVAG 351


>gi|159030719|emb|CAO88392.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 1222

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 55/335 (16%), Positives = 114/335 (34%), Gaps = 49/335 (14%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            V      +L V        +LWD+  + +++G++F     S   +A   S D       
Sbjct: 184 AVAFSPNGQLIVSASKDHSIQLWDL--QGKLVGQEFGGHEGSVNSVA--FSPD------- 232

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                        + +VSG    ++ + +  G  I       + ++    FSP+ Q +  
Sbjct: 233 ------------GQLIVSGSNDKTIQLWNLQGKEICPHFKGHEGLVNTVAFSPDGQLIIS 280

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D+     + L D +     +        + +  FS +G + +IS   D  + ++  +
Sbjct: 281 GSNDN----TIRLWDRKCHAVGEPFYGHEDTVKSIAFSPDG-QLIISGSNDRTIRLW--N 333

Query: 289 LQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           LQ  +  +        +S  ++SPD     F         + +    G       Q  + 
Sbjct: 334 LQGKSIGQPLRGHGSGVSCVAFSPDGQ---FIVSGSYDTTVRLWNLQGELITPPFQGHDG 390

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
           S     +SP G LIA          I +    G+         D  +++  +SP G+ ++
Sbjct: 391 SVLSVAFSPDGHLIASGSNDTT---IRLWDLRGNPIGQPFIGHDDWVRSVAFSPDGQFIV 447

Query: 406 FSRK----KDGDTGSKLYSIDLNGRNETLINTPAY 436
                   +  +    L SI+    +   +   + 
Sbjct: 448 SGSNDETIRLWNLQGNLISINKKSASYRRVTLASD 482



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 90/276 (32%), Gaps = 24/276 (8%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G+F     ++  ++        L    +     +         +    FSPN Q +  
Sbjct: 137 IGGNFERGRAYLERAIKLDNSPKRLIQCAKVLLINKPKGNGSKNYIRAVAFSPNGQLIVS 196

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           A+ D      + L D +     +  G     + +  FS +G + ++S   D+ + ++  +
Sbjct: 197 ASKDH----SIQLWDLQGKLVGQEFGGHEGSVNSVAFSPDG-QLIVSGSNDKTIQLW--N 249

Query: 289 LQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           LQ             +  + ++SPD   I+  S+      + +               E 
Sbjct: 250 LQGKEICPHFKGHEGLVNTVAFSPDGQLIISGSN---DNTIRLWDRKCHAVGEPFYGHED 306

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
           +     +SP G LI           I +    G      +    S +    +SP G+ ++
Sbjct: 307 TVKSIAFSPDGQLIISGSNDRT---IRLWNLQGKSIGQPLRGHGSGVSCVAFSPDGQFIV 363

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                  DT  +L+  +L G    LI  P    D  
Sbjct: 364 SGSY---DTTVRLW--NLQGE---LITPPFQGHDGS 391


>gi|94967825|ref|YP_589873.1| lysine decarboxylase transcriptional regulator, CadC [Candidatus
           Koribacter versatilis Ellin345]
 gi|94549875|gb|ABF39799.1| lysine decarboxylase transcriptional regulator, CadC [Candidatus
           Koribacter versatilis Ellin345]
          Length = 724

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 86/257 (33%), Gaps = 17/257 (6%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
                ++  D A+  ++       + +  F+ + Q V Y TY       +          
Sbjct: 452 HRRGQLLRYDDASHNFVPYLGGPSVDQLDFTHDGQWVTYVTY----PEHILWRSRVDGTD 507

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFINISA 307
            +++         P++S +G+           +    Y +  +    + + + L      
Sbjct: 508 AQKLTEAPMRAFVPKWSPDGQSIAFRANFAAGKPWQTYVISSKGGVAQLVASELSNVGGP 567

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            ++ D   ++   + +  E L +   +    K I         DPV SP G  +     +
Sbjct: 568 GWTADGHGLILVGEHD--ESLRIFDLHSGSSKFI--PNSQHMSDPVVSPSGRYLL--SGN 621

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGR 426
            +   I V+     Q R L +   +  P WS   + + F   +       +Y I + +G 
Sbjct: 622 PDDNRIDVLDLQTGQRRHLADQ--VDYPAWSRDEKFVYF--NRFSAWSPAMYRIRVADGV 677

Query: 427 NETLINTPAYASDPQWV 443
            E L +   +A+   W 
Sbjct: 678 VEKLFDLDGFAATGSWS 694



 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 110/263 (41%), Gaps = 32/263 (12%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
               G + + + +             L     DG + + LT +  +  F P++SP+ Q +
Sbjct: 481 FTHDGQWVTYVTYPEHI---------LWRSRVDGTDAQKLTEAPMR-AFVPKWSPDGQSI 530

Query: 227 AY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           A+ A +      + Y++ ++     + + +  S +  P ++++G   ++  + DE++ I+
Sbjct: 531 AFRANFAAGKPWQTYVISSK-GGVAQLVASELSNVGGPGWTADGHGLILVGEHDESLRIF 589

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             DL S +++ + N+  ++     SP    ++  S      ++ V+      ++ ++   
Sbjct: 590 --DLHSGSSKFIPNSQHMSD-PVVSPSGRYLL--SGNPDDNRIDVLDLQTGQRRHLADQV 644

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWS------ 398
           +     P WS     + F +FS    A+  ++  DG  E+L   D      +WS      
Sbjct: 645 DY----PAWSRDEKFVYFNRFSAWSPAMYRIRVADGVVEKLFDLDGFAATGSWSTWSALA 700

Query: 399 PSGRSLIFSRKKDGDTGSKLYSI 421
           P G S++  R   G     LY+I
Sbjct: 701 PDG-SVLLLRDLGGT---DLYAI 719



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 88/262 (33%), Gaps = 19/262 (7%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
             DR G N R L  +  ++    R++P    +     +   +          D   +R+ 
Sbjct: 317 TCDRQGGNARVLFETPGEVTRM-RWAPAGDVLRMVIINSSGVGTALWETRPGDWKLRRVL 375

Query: 255 NFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQS------NATERLTNTLFINI 305
           + R+M   P    +S++ +    S       +I+ +              RL        
Sbjct: 376 SDRAMQDEPWTLSWSADSQWLAFSAVTPSGREIWMLGRDHWWKHAPPRPTRLIGGPIDFD 435

Query: 306 SASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             +++  D++     S R G+    +++ + +    +      S     ++  G  + + 
Sbjct: 436 LPTFNKNDNTLYAVGSHRRGQ----LLRYDDASHNFVPYLGGPSVDQLDFTHDGQWVTYV 491

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +   +  +   + DG+  + L E       P WSP G+S+ F          + Y I  
Sbjct: 492 TYP--EHILWRSRVDGTDAQKLTEAPMRAFVPKWSPDGQSIAFRANFAAGKPWQTYVISS 549

Query: 424 NGRNETLINTP-AYASDPQWVG 444
            G    L+ +  +    P W  
Sbjct: 550 KGGVAQLVASELSNVGGPGWTA 571


>gi|332663736|ref|YP_004446524.1| WD40 repeat-containing protein [Haliscomenobacter hydrossis DSM
           1100]
 gi|332332550|gb|AEE49651.1| WD40 repeat-containing protein [Haliscomenobacter hydrossis DSM
           1100]
          Length = 964

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 108/342 (31%), Gaps = 46/342 (13%)

Query: 110 VLVTGRVIKEGKDRLRVEF----RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
            +       +GKD L        +LWD    +    K F    +    +A   S D    
Sbjct: 232 YVKAVAFSPDGKDVLTGSGDNTAKLWDAASGQ--AEKTFTGHTSHVSSVA--FSPD---- 283

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
                           + V++G   N+  + D                +    FSP+ ++
Sbjct: 284 ---------------GKKVLTGNFDNTAKLWDAVSGQAEKTFTGHTAYVTSVAFSPDGKE 328

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +   + D+     V L D    +A K      S + +  FS +GK+ L +   D    ++
Sbjct: 329 LLTGSGDN----TVKLWDVGNGQAEKTFTGHTSFVYSVAFSPDGKKVL-TGSWDFTAKLW 383

Query: 286 SVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             D  S   E+  T       S ++SPD  +++  S     +   +  +     ++    
Sbjct: 384 --DAASGQAEKTFTGHRDPVFSVAFSPDGKKVLTGS---WDKTAVLWDAGSGQAEKAFTG 438

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGR 402
             AS     +SP G  +    +        +      Q      D    + +  +SP G+
Sbjct: 439 HTASVSSVAFSPDGKKVLTGSWDSTA---KLWDAGSGQAEKTFTDPTSCVHSVAFSPDGK 495

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            ++       D  + L+        +T  +  +  +   +  
Sbjct: 496 KVLTGSW---DKTAVLWDAGSGQAEKTFTDHTSKVTSVAFSP 534



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 100/317 (31%), Gaps = 50/317 (15%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           ++TG              +LWD    +    K F    +    +A   S D         
Sbjct: 455 VLTGSWDSTA--------KLWDAGSGQ--AEKTFTDPTSCVHSVA--FSPD--------- 493

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
                      + V++G    +  + D                +    FSP+ +KV   +
Sbjct: 494 ----------GKKVLTGSWDKTAVLWDAGSGQAEKTFTDHTSKVTSVAFSPDGKKVLTGS 543

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +D+       L D    +A K        + +  FS +GK+ L +   D    ++  D  
Sbjct: 544 WDN----TAKLWDAGSGQAEKNYTGHTFFVYSVAFSPDGKKVL-TGSFDNTAKLW--DAG 596

Query: 291 SNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           S   E+          S ++SPD  +++  S     +   +  +     ++      +S 
Sbjct: 597 SGQAEKTFAGHTSHVSSVAFSPDGKKVLTGS---WDKTAVLWDAGSGQAEKTFTGHTSSV 653

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFS 407
               +SP G  +    +      + +      Q             A  +SP G+ L+  
Sbjct: 654 HSVAFSPDGKKVLTGSWDNT---VKLWDAASGQAEKTFTGHTDGVSAVAFSPDGKKLL-- 708

Query: 408 RKKDGDTGSKLYSIDLN 424
               GD  +KL+ +  +
Sbjct: 709 -TGSGDNTAKLWDVQRD 724



 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 51/298 (17%), Positives = 97/298 (32%), Gaps = 47/298 (15%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           ++TG   K           LWD    +    K F    AS   +A   S D         
Sbjct: 413 VLTGSWDKTA--------VLWDAGSGQ--AEKAFTGHTASVSSVA--FSPD--------- 451

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
                      + V++G   ++  + D                +    FSP+ +KV   +
Sbjct: 452 ----------GKKVLTGSWDSTAKLWDAGSGQAEKTFTDPTSCVHSVAFSPDGKKVLTGS 501

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +D        L D    +A K   +  S + +  FS +GK+ L +   D    ++  D  
Sbjct: 502 WDK----TAVLWDAGSGQAEKTFTDHTSKVTSVAFSPDGKKVL-TGSWDNTAKLW--DAG 554

Query: 291 SNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           S   E+  T   F   S ++SPD  +++  S         +  +     ++      +  
Sbjct: 555 SGQAEKNYTGHTFFVYSVAFSPDGKKVLTGSF---DNTAKLWDAGSGQAEKTFAGHTSHV 611

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
               +SP G  +    +        +      Q         S++ +  +SP G+ ++
Sbjct: 612 SSVAFSPDGKKVLTGSWDKTAV---LWDAGSGQAEKTFTGHTSSVHSVAFSPDGKKVL 666



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 89/273 (32%), Gaps = 20/273 (7%)

Query: 177 ILFVSESVVSGIIKNSLC-VMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDD 233
           + + S       I + L      D   +  L         +    FSP+ +K    + D+
Sbjct: 109 MWYNSSRHPESQISHDLYHQAISDTQAVFMLKRFNGHRSSVSAVAFSPDGKKALTGSRDN 168

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                  L D    +A K        + +  FS +GK+ L +  +D    ++  D  S  
Sbjct: 169 ----TAVLWDAVSGQAEKTFTGHTDYVFSVAFSPDGKKIL-TGSRDNTAKLW--DAGSGQ 221

Query: 294 TER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            E+  T       + ++SPD   ++  S   G     +  +     ++      +     
Sbjct: 222 AEKTFTGHTAYVKAVAFSPDGKDVLTGS---GDNTAKLWDAASGQAEKTFTGHTSHVSSV 278

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
            +SP G  +    F         +   G  E+      + + +  +SP G+ L+      
Sbjct: 279 AFSPDGKKVLTGNFDNTAKLWDAVS--GQAEKTFTGHTAYVTSVAFSPDGKELL---TGS 333

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           GD   KL+ +      +T     ++     +  
Sbjct: 334 GDNTVKLWDVGNGQAEKTFTGHTSFVYSVAFSP 366



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 79/221 (35%), Gaps = 12/221 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G   N+  + D                +F   FSP+ +K+   + D+       L D  
Sbjct: 163 TGSRDNTAVLWDAVSGQAEKTFTGHTDYVFSVAFSPDGKKILTGSRDN----TAKLWDAG 218

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
             +A K      + + A  FS +GK  L +   D    ++  D  S   E+  T      
Sbjct: 219 SGQAEKTFTGHTAYVKAVAFSPDGKDVL-TGSGDNTAKLW--DAASGQAEKTFTGHTSHV 275

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPD  + V   + +   +L+   +     ++      A      +SP G  +  T
Sbjct: 276 SSVAFSPDGKK-VLTGNFDNTAKLW--DAVSGQAEKTFTGHTAYVTSVAFSPDGKELL-T 331

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                   +  +    +++      S + +  +SP G+ ++
Sbjct: 332 GSGDNTVKLWDVGNGQAEKTFTGHTSFVYSVAFSPDGKKVL 372


>gi|170102895|ref|XP_001882663.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642560|gb|EDR06816.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1110

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 58/313 (18%), Positives = 105/313 (33%), Gaps = 61/313 (19%)

Query: 104  NSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHT 157
              +G   LVT  V      R  V        R+WD +  + ++                 
Sbjct: 820  RLVGHDSLVT-SVAFSPDGRHIVSGSGDKTVRVWDAQTGQSVM----------------- 861

Query: 158  ISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMD-RDGANIRYLTPSRDQILF 215
                    + G  G   S     +   +VSG    ++ V D + G ++       D  + 
Sbjct: 862  ------DPLKGHDGRVTSVAFSPNGRHIVSGSGDKTVRVWDAQTGQSVMDPLKGHDDYVT 915

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               FSP+ + +   + D    +RV+   T         G   S + +  FS +G+  + S
Sbjct: 916  SVAFSPDGRHIVSGSRD--KTVRVWDAQTGQSVMDPLKG-HDSWVSSVAFSPDGRHIV-S 971

Query: 276  VQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
               D+ + ++  D Q+  +    L        S ++SPD   IV  S   G + + V  +
Sbjct: 972  GSHDKTVRVW--DAQTGQSVMDPLKGHDDYVTSVAFSPDGRHIVSGS---GDKTVRVWDA 1026

Query: 334  NGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                      +  +       +SP G  I                  GS ++  V   ++
Sbjct: 1027 QTGQSVMDPLKGHDDYVTSVAFSPDGRHIV----------------SGSGDK-TVRVWDV 1069

Query: 393  QAPTWSPSGRSLI 405
            Q   +SP GR ++
Sbjct: 1070 QTVAFSPDGRHIV 1082



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/255 (18%), Positives = 91/255 (35%), Gaps = 27/255 (10%)

Query: 185  VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VSG    ++ V D + G ++       D  +    FSPN + +   + D    +RV+   
Sbjct: 841  VSGSGDKTVRVWDAQTGQSVMDPLKGHDGRVTSVAFSPNGRHIVSGSGD--KTVRVWDAQ 898

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTL 301
            T         G     + +  FS +G+  + S  +D+ + ++  D Q+  +    L    
Sbjct: 899  TGQSVMDPLKG-HDDYVTSVAFSPDGRHIV-SGSRDKTVRVW--DAQTGQSVMDPLKGHD 954

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDL 360
                S ++SPD   IV  S     + + V  +          +  +       +SP G  
Sbjct: 955  SWVSSVAFSPDGRHIVSGSH---DKTVRVWDAQTGQSVMDPLKGHDDYVTSVAFSPDGRH 1011

Query: 361  IAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            I           + V      Q     L   D  + +  +SP GR ++      GD   +
Sbjct: 1012 IV---SGSGDKTVRVWDAQTGQSVMDPLKGHDDYVTSVAFSPDGRHIV---SGSGDKTVR 1065

Query: 418  LYSI-----DLNGRN 427
            ++ +       +GR+
Sbjct: 1066 VWDVQTVAFSPDGRH 1080



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 15/175 (8%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
           + +  M+   ++   R+    S++ +  FS +G+  + S   D+ + ++  D Q+  +  
Sbjct: 805 VEIGQMEHWSEKCFLRLVGHDSLVTSVAFSPDGRHIV-SGSGDKTVRVW--DAQTGQSVM 861

Query: 296 -RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPV 353
             L        S ++SP+   IV  S   G + + V  +          +  +       
Sbjct: 862 DPLKGHDGRVTSVAFSPNGRHIVSGS---GDKTVRVWDAQTGQSVMDPLKGHDDYVTSVA 918

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLI 405
           +SP G  I           + V      Q     L   DS + +  +SP GR ++
Sbjct: 919 FSPDGRHIVSGSRDKT---VRVWDAQTGQSVMDPLKGHDSWVSSVAFSPDGRHIV 970


>gi|332884026|gb|EGK04306.1| hypothetical protein HMPREF9456_01334 [Dysgonomonas mossii DSM
           22836]
          Length = 698

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 120/315 (38%), Gaps = 64/315 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY------ 228
           S+I F+S    S    + +  M+ DG+  + ++     +     +SP+ +++ Y      
Sbjct: 117 SKIAFLSSESGS----SQIWEMNPDGSGRKQISNIEGGVNGF-SYSPDGKRIMYIKNIKF 171

Query: 229 ---ATYDDEDILRV-----------YLMDTRIDRAPKRIGNFRSMILA------------ 262
               T   +D+ +            +  +   +     + +F    ++            
Sbjct: 172 GERTTDRYKDLPKASGRIIDDLMYKHWSEWIEEIPHTFVADFDGEKVSDGIDILGDEPYE 231

Query: 263 ----P-------RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTL-F 302
               P        +S + K    + +K            DIY  +++S  TE LT  +  
Sbjct: 232 CPMLPFGGTEQLAWSPDSKSIAYTCRKKKGLEYALSTNSDIYLYNIESKQTENLTEGMMG 291

Query: 303 INISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            +I+  +SPD   I ++S +REG    K +++V+     ++  +++  + +    +WS  
Sbjct: 292 YDINPVFSPDGKYIAWQSMEREGYESDKNRMFVINLATKEKTYVTEAFDYNTDFLLWSDD 351

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              I F      K  +  +     + + + +  +    ++  +G  LI + +      ++
Sbjct: 352 NQSIYFVSCVEAKTQLFQVYIHTKEIKQITK-GDHDYESFEIAGDKLI-ALRHSLSKPNE 409

Query: 418 LYSIDLNGRNETLIN 432
           +YS++++    T ++
Sbjct: 410 IYSVNISTGEATELS 424



 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 87/274 (31%), Gaps = 61/274 (22%)

Query: 220 SPNQQKV----AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP++ K+     Y + +     +            K+I           +   G +    
Sbjct: 63  SPDRSKILYGVTYVSIEQNKTNKELFTMNVDGSDKKQITQTPKSENNAIWVKGGSKIAFL 122

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---------ESDR---- 322
             +  +  I+ ++   +  ++++N        SYSPD  +I++          +DR    
Sbjct: 123 SSESGSSQIWEMNPDGSGRKQISNIEGGVNGFSYSPDGKRIMYIKNIKFGERTTDRYKDL 182

Query: 323 ---EGK-----------------EQLYVMQSNGSDQK-RISQDKEASYFDP--------- 352
               G+                    +V   +G      I    +  Y  P         
Sbjct: 183 PKASGRIIDDLMYKHWSEWIEEIPHTFVADFDGEKVSDGIDILGDEPYECPMLPFGGTEQ 242

Query: 353 -VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSG 401
             WSP    IA+T                I +   +  Q   L E        P +SP G
Sbjct: 243 LAWSPDSKSIAYTCRKKKGLEYALSTNSDIYLYNIESKQTENLTEGMMGYDINPVFSPDG 302

Query: 402 RSLIF-SRKKDG--DTGSKLYSIDLNGRNETLIN 432
           + + + S +++G     ++++ I+L  + +T + 
Sbjct: 303 KYIAWQSMEREGYESDKNRMFVINLATKEKTYVT 336



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 93/257 (36%), Gaps = 62/257 (24%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTL 301
             P+ + +F   +   + S +  + L  V      Q     +++++++  +  +++T T 
Sbjct: 46  MTPEVLYSF-GRVSDIQLSPDRSKILYGVTYVSIEQNKTNKELFTMNVDGSDKKQITQTP 104

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +A +    S+I F S   G  Q++ M  +GS +K+IS + E       +SP G  I
Sbjct: 105 KSENNAIWVKGGSKIAFLSSESGSSQIWEMNPDGSGRKQIS-NIEGGVNGFSYSPDGKRI 163

Query: 362 AFTK------FSGEKF---------------------------AIGVMKKDG---SQERL 385
            + K       + +++                              V   DG   S    
Sbjct: 164 MYIKNIKFGERTTDRYKDLPKASGRIIDDLMYKHWSEWIEEIPHTFVADFDGEKVSDGID 223

Query: 386 LVEDSNLQAP----------TWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNET 429
           ++ D   + P           WSP  +S+ ++ RKK G      T S +Y  ++  +   
Sbjct: 224 ILGDEPYECPMLPFGGTEQLAWSPDSKSIAYTCRKKKGLEYALSTNSDIYLYNIESKQTE 283

Query: 430 LINTP--AYASDPQWVG 444
            +      Y  +P +  
Sbjct: 284 NLTEGMMGYDINPVFSP 300



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/162 (11%), Positives = 54/162 (33%), Gaps = 5/162 (3%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMD 243
              + + + + +      LT         P FSP+ + +A+ + + E    D  R+++++
Sbjct: 267 STNSDIYLYNIESKQTENLTEGMMGYDINPVFSPDGKYIAWQSMEREGYESDKNRMFVIN 326

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                       F        +S + +        +    ++ V + +   +++T     
Sbjct: 327 LATKEKTYVTEAFDYNTDFLLWSDDNQSIYFVSCVEAKTQLFQVYIHTKEIKQITKGDHD 386

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             S   + D   I          ++Y +  +  +   +S + 
Sbjct: 387 YESFEIAGD-KLIALRHSLSKPNEIYSVNISTGEATELSFEN 427


>gi|217971420|ref|YP_002356171.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Shewanella baltica OS223]
 gi|217496555|gb|ACK44748.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella baltica OS223]
          Length = 673

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 53/327 (16%), Positives = 112/327 (34%), Gaps = 66/327 (20%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I+           K S+ +   DG + R +T  +   + EP FSP+ + +A+ +  +ED
Sbjct: 48  HIIAPVTEYDLKADKGSIQLWHFDGKHNRAITA-KGLRVSEPVFSPDGKTLAFVSQRNED 106

Query: 236 -ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-------------------- 274
              ++YL+        +R+ +  + + + ++   GK                        
Sbjct: 107 EASQIYLLPMDGPGEAQRLTDIPTGVNSIKW--VGKHLYFISNIFPNQSWEEMKTQLTTD 164

Query: 275 --------------------SVQKDEAMDIYSVDLQSNATERLTNTLF------INISAS 308
                                + +     ++ +  +    E +T             SAS
Sbjct: 165 TDNKVSAHQWNTLPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHELPRSDQSSAS 224

Query: 309 Y--SPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           Y  SP+   I F +     +      +++     +  + ++ D +A   +P +SP G  +
Sbjct: 225 YDVSPNERWIAFNAYGSENKVDPKIDIFLAAIGDNKAENLTADNQAPDLNPSFSPNGKTL 284

Query: 362 AFTKFSGEKF-----AIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDT 414
           AFT+     F      + ++  D  +   L  D +  +   +W+P  +   F    +   
Sbjct: 285 AFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTPDNKG--FYATVEDAA 342

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQ 441
            +++YSID        I      S P 
Sbjct: 343 TNRIYSIDAKSGKVKAITEATDFSQPA 369



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 53/295 (17%), Positives = 98/295 (33%), Gaps = 72/295 (24%)

Query: 217 PRFSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  SP  + +      Y    D+  ++++  D    +  + I      +  P FS +GK 
Sbjct: 40  PIVSPTGEHIIAPVTEYDLKADKGSIQLWHFD---GKHNRAITAKGLRVSEPVFSPDGKT 96

Query: 272 ALISVQK--DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-------- 320
                Q+  DEA  IY + +      +RLT+      S  +      + F S        
Sbjct: 97  LAFVSQRNEDEASQIYLLPMDGPGEAQRLTDIPTGVNSIKWV--GKHLYFISNIFPNQSW 154

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQ----- 343
                                           D   +  ++ + + G + + I+Q     
Sbjct: 155 EEMKTQLTTDTDNKVSAHQWNTLPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHE 214

Query: 344 --DKEASYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLVEDSN--LQA 394
               + S      SP    IAF  +  E        I +     ++   L  D+      
Sbjct: 215 LPRSDQSSASYDVSPNERWIAFNAYGSENKVDPKIDIFLAAIGDNKAENLTADNQAPDLN 274

Query: 395 PTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
           P++SP+G++L F+R+K        S+L  +D++ R  T + +      S   W  
Sbjct: 275 PSFSPNGKTLAFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTP 329



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 84/267 (31%), Gaps = 17/267 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            + F+S    +   +     +  D  N             +     ++++ A+       
Sbjct: 141 HLYFISNIFPNQSWEEMKTQLTTDTDNKVSAHQWNTLPYSQFDHWLDERRQAHVFRIPAK 200

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-----QKDEAMDIYSVDLQ 290
              V  +         R         +   S N +    +      + D  +DI+   + 
Sbjct: 201 GGNVENITQPAGHELPR---SDQSSASYDVSPNERWIAFNAYGSENKVDPKIDIFLAAIG 257

Query: 291 SNATERLT-NTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKRISQD 344
            N  E LT +    +++ S+SP+   + F   +         +L ++  +      ++ D
Sbjct: 258 DNKAENLTADNQAPDLNPSFSPNGKTLAFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSD 317

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S     W+P       T        I  +     + + + E ++   P     G  +
Sbjct: 318 WDRSVSQFSWTPDNKGFYATVEDAATNRIYSIDAKSGKVKAITEATDFSQPAIGKDGELI 377

Query: 405 IFSRKKDGDTGSKLYSID-LNGRNETL 430
                +     ++L SI+  NG+ E L
Sbjct: 378 A--TNQSFLYPARLVSINPRNGKIERL 402



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 7/102 (6%)

Query: 350 FDPVWSPQGDLIA--FTKFS--GEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSL 404
             P+ SP G+ I    T++    +K +I +   DG   R +      +  P +SP G++L
Sbjct: 38  GSPIVSPTGEHIIAPVTEYDLKADKGSIQLWHFDGKHNRAITAKGLRVSEPVFSPDGKTL 97

Query: 405 IFSRKKDGDTGSKLYS--IDLNGRNETLINTPAYASDPQWVG 444
            F  +++ D  S++Y   +D  G  + L + P   +  +WVG
Sbjct: 98  AFVSQRNEDEASQIYLLPMDGPGEAQRLTDIPTGVNSIKWVG 139



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/248 (12%), Positives = 68/248 (27%), Gaps = 68/248 (27%)

Query: 260 ILAPRFSSNGKRAL-----ISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +P  S  G+  +       ++ D  ++ ++  D        +T          +SPD 
Sbjct: 37  IGSPIVSPTGEHIIAPVTEYDLKADKGSIQLWHFD--GKHNRAITAKGLRVSEPVFSPDG 94

Query: 314 SQIVFESDR--EGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
             + F S R  +   Q+Y++  +G  + +R++ D         W   G  + F       
Sbjct: 95  KTLAFVSQRNEDEASQIYLLPMDGPGEAQRLT-DIPTGVNSIKWV--GKHLYFISNIFPN 151

Query: 367 ------------------------------------SGEKFAIGVMKKDGSQERLLVEDS 390
                                                  +  +  +   G     + + +
Sbjct: 152 QSWEEMKTQLTTDTDNKVSAHQWNTLPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPA 211

Query: 391 NLQAPT---------WSPSGRSLIF---SRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             + P           SP+ R + F     +   D    ++   +       +     A 
Sbjct: 212 GHELPRSDQSSASYDVSPNERWIAFNAYGSENKVDPKIDIFLAAIGDNKAENLTADNQAP 271

Query: 439 D--PQWVG 444
           D  P +  
Sbjct: 272 DLNPSFSP 279


>gi|157961043|ref|YP_001501077.1| peptidase S41 [Shewanella pealeana ATCC 700345]
 gi|157846043|gb|ABV86542.1| peptidase S41 [Shewanella pealeana ATCC 700345]
          Length = 1092

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 119/311 (38%), Gaps = 40/311 (12%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
             +Q    +   + SR+ F+S+S  +      +  M  DG++ +  T   D  +   R  
Sbjct: 214 QTHQGSVRQPMLWQSRLYFISDSDGNDN----IWSMATDGSDAKQHTHYTDWQVRGARL- 268

Query: 221 PNQQKVAY----------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            NQ ++ +               E  L + L+     +    +        +   +  G 
Sbjct: 269 -NQGRIVFQQGADIKLFDIASGKEQTLDIELISDFAQKREHWVKEPMKYATSTTLAPKGD 327

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGKE 326
           + +I+ +         V +     +RL            SA  S D + +   SD  G++
Sbjct: 328 KVVITARSH-------VAIAGTDGQRLVEIALPKHSRVRSAVMSQDGAWVYGISDASGEQ 380

Query: 327 QLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +++   ++GS++ K++++D +    +   SP G  +A   + G  + + +  K GS +++
Sbjct: 381 EVWQFAADGSEESKQLTKDAKTLRLNLHLSPDGRYLAHDDYDGNVWMLDL--KKGSNKKI 438

Query: 386 LVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPA 435
           + +           WS   R +  ++ + G    ++    LN      +        +P+
Sbjct: 439 ITQGEGLGPYADIVWSADSRFIALTKAEMGKARPQIVLYSLNKNRAESLTSDKYESFSPS 498

Query: 436 YASDPQWVGFM 446
           +++D  W+ F+
Sbjct: 499 FSADGDWLYFL 509



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 73/226 (32%), Gaps = 28/226 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           NQQ + +    D          +  D   KR+ +  +  L    S NGK        + +
Sbjct: 40  NQQTLVFTAEGD------LWTQSLGDAQAKRLTSLPAQELGATISPNGKSVAYVANYEGS 93

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++Y + +     +R++          ++ D   +    +  G    +V+++   D    
Sbjct: 94  TEVYVIPIAGGQAKRVSFENSRVRVQGWTADGKVLYSTDNAFGPANYWVLRTVEPDTLIT 153

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKF-------------SGEKFAIGVMKKDGSQERLL-- 386
                A   +     +G+ + FT+F              G K  +   K    QE     
Sbjct: 154 VDLPLADAIEGAIDDKGEYLYFTRFGLQTTGDNAKVYRGGAKGELWKFKLASKQEATPLT 213

Query: 387 -VEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                +++ P  W      L F    DG     ++S+  +G +   
Sbjct: 214 QTHQGSVRQPMLWQ---SRLYFISDSDG--NDNIWSMATDGSDAKQ 254



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/256 (19%), Positives = 84/256 (32%), Gaps = 28/256 (10%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           +IS       T + G F  R   +++  +    +  L      G        S       
Sbjct: 18  SISPSFAAESTVKPGYF--RAPALNQQTLVFTAEGDLWTQSL-GDAQAKRLTSLPAQELG 74

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              SPN + VAY   + E    VY++     +A KR+    S +    ++++GK  L S 
Sbjct: 75  ATISPNGKSVAYVA-NYEGSTEVYVIPIAGGQA-KRVSFENSRVRVQGWTADGK-VLYST 131

Query: 277 QKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFES------------D 321
                   Y V L++   + L      L   I  +       + F               
Sbjct: 132 DNAFGPANYWV-LRTVEPDTLITVDLPLADAIEGAIDDKGEYLYFTRFGLQTTGDNAKVY 190

Query: 322 REG-KEQLYVMQSNGS-DQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKK 378
           R G K +L+  +     +   ++Q  + S   P+ W      + F   S     I  M  
Sbjct: 191 RGGAKGELWKFKLASKQEATPLTQTHQGSVRQPMLWQ---SRLYFISDSDGNDNIWSMAT 247

Query: 379 DGSQERLLVEDSNLQA 394
           DGS  +     ++ Q 
Sbjct: 248 DGSDAKQHTHYTDWQV 263



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 95/296 (32%), Gaps = 46/296 (15%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +      + V+   G   + ++    ++  +  ++ +  KV Y+T +       +++ 
Sbjct: 87  VANYEGSTEVYVIPIAGGQAKRVSFENSRVRVQ-GWTADG-KVLYSTDNAFGPANYWVLR 144

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-------------VQKDEAMDIYSVDLQ 290
           T        +    +  +       G+    +              +     +++   L 
Sbjct: 145 TVEPDTLITVDLPLADAIEGAIDDKGEYLYFTRFGLQTTGDNAKVYRGGAKGELWKFKLA 204

Query: 291 SNAT-ERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           S      LT                S++ F SD +G + ++ M ++GSD K+ +   +  
Sbjct: 205 SKQEATPLTQTHQGSVRQPMLW--QSRLYFISDSDGNDNIWSMATDGSDAKQHTHYTDWQ 262

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTW-------- 397
                 +     I F    G    +  +   G ++ L   L+ D   +   W        
Sbjct: 263 VRGARLNQG--RIVF--QQGADIKLFDI-ASGKEQTLDIELISDFAQKREHWVKEPMKYA 317

Query: 398 -----SPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                +P G  ++ + +      G  G +L  I L     + + +   + D  WV 
Sbjct: 318 TSTTLAPKGDKVVITARSHVAIAGTDGQRLVEIALP--KHSRVRSAVMSQDGAWVY 371



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 80/239 (33%), Gaps = 24/239 (10%)

Query: 200 GANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           G+N + +T         +  +S + + +A    +        ++ +      + + + + 
Sbjct: 433 GSNKKIITQGEGLGPYADIVWSADSRFIALTKAEMGKARPQIVLYSLNKNRAESLTSDKY 492

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT----ERLTNTLFINISASYSPDSS 314
              +P FS++G      +   + +   S            ++ T    I ++     D +
Sbjct: 493 ESFSPSFSADGDWLYF-LSNRKFVSTPSSPWGDRNLGPMFDKRTQVFAIALN-----DDA 546

Query: 315 QIVFESDREGKEQLYVMQSN--------GSDQKRISQDK--EASYFDPVWSPQGDLIAFT 364
           +  F+   E   +      N        G    R+ Q      +Y     +     +  T
Sbjct: 547 RFAFQKPNELMSEPQKADDNEVETEVEWGGLSSRLWQVPIAAGNYDSLQMAKDKFYLLDT 606

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             SG+   + V+K D    ++     ++     S  G  L F RK+    GS++  +D 
Sbjct: 607 STSGKS-TLKVVKFDVLSPKVETFSKDVGEYQLSQDGEKL-FIRKQS-KQGSEMLIVDA 662


>gi|119489608|ref|ZP_01622368.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
 gi|119454520|gb|EAW35668.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
          Length = 1795

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 80/220 (36%), Gaps = 15/220 (6%)

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
                L    FSPN Q +   + D      V L           +G  +  + +  FS +G
Sbjct: 1554 HSDSLMSVSFSPNSQFIVTGSKDK----TVKLWTPEGRLLQTFVG-HQGWVNSVSFSPDG 1608

Query: 270  KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +    S   D  + ++  +LQ    + +       +  S+SPD   I           + 
Sbjct: 1609 RMIA-SASDDGTVKLW--NLQGKLLKTIMAHNAYVLGVSFSPDGHTIA---SAGYDNTVK 1662

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +    G   + + +    S    V+SP G LIA   + G    +         + LL   
Sbjct: 1663 LWSREGILLETLLKGSSDSVTSVVFSPDGHLIASASYDG-FVKLWSRHNGTLLKTLLGHQ 1721

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            +++ + ++SP  R L  + +   D    L+++DL+   E 
Sbjct: 1722 NSVMSISFSPDSRVLASASR---DQTVILWNLDLDDLIER 1758



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 51/238 (21%), Positives = 95/238 (39%), Gaps = 12/238 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG +  ++ +    G  +  L   +  I     FSPN Q +A ++ D    L     DT+
Sbjct: 1143 SGSVDKAIKLWTPKGKLLNTLKGHQKSITSV-SFSPNAQMIASSSQDQTVKLWKLGQDTQ 1201

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            I   P  +     ++ +  FS +G+    S  +D+ + ++S  L+      +T       
Sbjct: 1202 IAAIPITLRGHGDIVSSVSFSPDGQIIA-SASEDKTVKLWS--LEGQLLRTITAHYSPLN 1258

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              S+SP    I   +  +G  +L   +       R S   ++  +   +SP G+LIA   
Sbjct: 1259 WVSFSPKGDVIA-TAGNDGTARLLTPRGRLLKTLRHSSSDQSKVYTVTFSPDGELIATV- 1316

Query: 366  FSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              G    I +  + G   ++L   +  +    +SP  + +  +    GD   KL+S D
Sbjct: 1317 --GSDRTIKLWNRQGRLLKILWGHEQIIYGVEFSPDSQMIATAS---GDKTVKLWSRD 1369



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/296 (17%), Positives = 106/296 (35%), Gaps = 27/296 (9%)

Query: 134  KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI---TGEKGDFNSRILFVSESVVSGIIK 190
              +KQ+      ++ +     +H   D I +S+      +      ++          I 
Sbjct: 1047 YKQKQLANIATLTAASDALFFSHQKFDAIMESLRAAQRLRQLKQLSLINFDLQNTESSIA 1106

Query: 191  NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             +L      G +        ++++++  FSP+   +A  + D      + L   +     
Sbjct: 1107 ATLQQAVY-GIHELNRLEGHNEVVWDVSFSPDGNVIASGSVDK----AIKLWTPKGKLLN 1161

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN---ATERLTNTLFINISA 307
               G+ +S+  +  FS N +    S  +D+ + ++ +   +        L     I  S 
Sbjct: 1162 TLKGHQKSIT-SVSFSPNAQMIA-SSSQDQTVKLWKLGQDTQIAAIPITLRGHGDIVSSV 1219

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            S+SPD   I   S+    + + +    G   + I+    +      +SP+GD+IA     
Sbjct: 1220 SFSPDGQIIASASE---DKTVKLWSLEGQLLRTIT-AHYSPLNWVSFSPKGDVIATAGND 1275

Query: 368  GEKFAIGVMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLY 419
            G      ++   G   + L   S+ Q+     T+SP G  +        D   KL+
Sbjct: 1276 GTA---RLLTPRGRLLKTLRHSSSDQSKVYTVTFSPDGELIA---TVGSDRTIKLW 1325



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 59/294 (20%), Positives = 109/294 (37%), Gaps = 64/294 (21%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S+ + +     ++ +  RDG  +R      DQ+     FSP+ + +A ++YD +    V 
Sbjct: 1351 SQMIATASGDKTVKLWSRDGELLRTFEGHGDQVTNV-SFSPDGKILASSSYDKK----VK 1405

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            L     D   K +   +  +L   FS +G + L S  +D+ + ++S   +S    +    
Sbjct: 1406 LWRIE-DIPLKLLEGHQDRVLGVSFSPDG-QILASASQDQTVKLWS---RSGTLLQTLKG 1460

Query: 301  LFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR------------------- 340
                +SA S+SPD   +   S  + + +L+ +  +    ++                   
Sbjct: 1461 YQDRVSAISFSPDGQLLATVSY-DNRVKLWRITPDPKQAQQRDHFLWTYTSLREQLYFRS 1519

Query: 341  --------ISQD-----KEASYFDP-----VWSPQGDLIAFTKFSGEKFAI------GVM 376
                    I  D      EAS F P      W+   D +    FS     I        +
Sbjct: 1520 FYFPLRGSIEFDQSLLQSEASVFHPLSTVNTWTAHSDSLMSVSFSPNSQFIVTGSKDKTV 1579

Query: 377  KKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            K    + RLL         + + ++SP GR +  +     D   KL+  +L G+
Sbjct: 1580 KLWTPEGRLLQTFVGHQGWVNSVSFSPDGRMIASASD---DGTVKLW--NLQGK 1628



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 90/262 (34%), Gaps = 33/262 (12%)

Query: 193  LCVMDRDG--ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            L  + +D   A I         I+    FSP+ Q +A A+ D      V L         
Sbjct: 1193 LWKLGQDTQIAAIPITLRGHGDIVSSVSFSPDGQIIASASEDK----TVKLWSLEGQLLR 1248

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISA 307
                ++  +     FS  G     +   D    + +   +    + L ++        + 
Sbjct: 1249 TITAHYSPLNW-VSFSPKGDVIA-TAGNDGTARLLT--PRGRLLKTLRHSSSDQSKVYTV 1304

Query: 308  SYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPD   I    SDR     + +    G   K I    E   +   +SP   +IA    
Sbjct: 1305 TFSPDGELIATVGSDRT----IKLWNRQGRLLK-ILWGHEQIIYGVEFSPDSQMIATAS- 1358

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID--- 422
                  + +  +DG   R      + +   ++SP G+ L  S     D   KL+ I+   
Sbjct: 1359 --GDKTVKLWSRDGELLRTFEGHGDQVTNVSFSPDGKILASSSY---DKKVKLWRIEDIP 1413

Query: 423  ---LNGRNETLINTPAYASDPQ 441
               L G  + ++   +++ D Q
Sbjct: 1414 LKLLEGHQDRVLGV-SFSPDGQ 1434



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 75/205 (36%), Gaps = 34/205 (16%)

Query: 105  SLGAQVLVTGR-------VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHT 157
            S  +Q +VTG           EG        RL       Q        SP    ++  +
Sbjct: 1564 SPNSQFIVTGSKDKTVKLWTPEG--------RLLQTFVGHQGWVNSVSFSPDG--RMIAS 1613

Query: 158  ISDDIYQSITGEKGDFNSRIL----FV--------SESVVSGIIKNSLCVMDRDGANIRY 205
             SDD    +   +G     I+    +V          ++ S    N++ +  R+G  +  
Sbjct: 1614 ASDDGTVKLWNLQGKLLKTIMAHNAYVLGVSFSPDGHTIASAGYDNTVKLWSREGILLET 1673

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            L       +    FSP+   +A A+YD      V L         K +   ++ +++  F
Sbjct: 1674 LLKGSSDSVTSVVFSPDGHLIASASYDG----FVKLWSRHNGTLLKTLLGHQNSVMSISF 1729

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQ 290
            S +  R L S  +D+ + ++++DL 
Sbjct: 1730 SPD-SRVLASASRDQTVILWNLDLD 1753


>gi|53713897|ref|YP_099889.1| putative peptidase [Bacteroides fragilis YCH46]
 gi|52216762|dbj|BAD49355.1| putative peptidase [Bacteroides fragilis YCH46]
          Length = 702

 Score = 92.0 bits (227), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 63/390 (16%), Positives = 132/390 (33%), Gaps = 78/390 (20%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDV---KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            G +      +     V +  + V   K  +++       +    R+I HT     YQ  
Sbjct: 55  IGGLAVSPDGKQIAYTVAY--YSVPENKSNREVFVMNADGTDN--RQITHTP----YQEN 106

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                   S++LF+S    +    + L  M+ DG+  + ++     I      SP+ +K+
Sbjct: 107 EVTWAADGSKLLFLS----NDNGSSQLYEMNPDGSGRKQISKYDGDIEGY-SISPDGKKI 161

Query: 227 AY--------------------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---- 262
            +                          D++  +  +         I +F    ++    
Sbjct: 162 LFIAQVKTVKSTADKYPDLDKATGIIITDLMYKHWDEWVTTAPHPFIADFDGKSISNIID 221

Query: 263 ------------P-------RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATE 295
                       P        +++   +   + +K            DIY  DL +  T 
Sbjct: 222 VLEGEPYESPMKPWGGIEQLAWNTTSDKVAYTCRKKTGLAYAISTNSDIYVYDLNTKKTV 281

Query: 296 RLTNTL-FINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASY 349
            +T  +   + +  YSPD   I ++S +R+G    + +L+VM     +++ +S+  +++ 
Sbjct: 282 NITEGMMGYDTNPQYSPDGKSIAWQSMERDGYEADQNRLFVMNLETGEKRFVSKAFDSNV 341

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              +WS     I FT     +  I  +       R +           +  G  LI +++
Sbjct: 342 DAFIWSRDAKTIYFTGVWHGETQIYSLDLANDSVRPVTSGMYDYEGV-ALFGDKLI-AKR 399

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                G ++Y+I L+G+   L        D
Sbjct: 400 HSMSMGDEIYAIALDGQTTQLTQENKQIYD 429



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 86/248 (34%), Gaps = 63/248 (25%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S +GK+   +V      +     +++ ++       ++T+T +     +++ 
Sbjct: 53  GRIGGLAVSPDGKQIAYTVAYYSVPENKSNREVFVMNADGTDNRQITHTPYQENEVTWAA 112

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
           D S+++F S+  G  QLY M  +GS +K+IS+  +        SP G  I F        
Sbjct: 113 DGSKLLFLSNDNGSSQLYEMNPDGSGRKQISKY-DGDIEGYSISPDGKKILFIAQVKTVK 171

Query: 367 -SGEKF---------------------------AIGVMKKDGSQERLLVEDSNLQAPTWS 398
            + +K+                              +   DG     ++ D     P  S
Sbjct: 172 STADKYPDLDKATGIIITDLMYKHWDEWVTTAPHPFIADFDGKSISNII-DVLEGEPYES 230

Query: 399 PS--------------GRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTP--AY 436
           P                  + ++ RKK G      T S +Y  DLN +    I      Y
Sbjct: 231 PMKPWGGIEQLAWNTTSDKVAYTCRKKTGLAYAISTNSDIYVYDLNTKKTVNITEGMMGY 290

Query: 437 ASDPQWVG 444
            ++PQ+  
Sbjct: 291 DTNPQYSP 298


>gi|317159442|ref|XP_001827318.2| NACHT and WD40 domain protein [Aspergillus oryzae RIB40]
          Length = 1204

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 99/285 (34%), Gaps = 30/285 (10%)

Query: 170  KGDFNSRILFVSESVVSGIIKNSLCVMDR--DGANIRYLTP-SRDQILFEPRFSPNQQKV 226
             G   S +      + S  I   L ++ +  D  +    T       +    FSP+ Q +
Sbjct: 840  SGLAFSPMQSTIRKMFSDSIPKQLNILPQVEDLWSAGLQTHEGHSSSVLSVAFSPDGQTI 899

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            A  + D      + L D +     +      S +L+  FS +G+    S   D+ + ++ 
Sbjct: 900  ASGSSDT----TIKLWDAKTGMELQTFKGHSSSVLSVAFSPDGQTIA-SGSSDKTIKLW- 953

Query: 287  VDLQSNATERLTNTLFINI-SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQD 344
             D +++   +        + S ++SPD   I   S DR     + +       + +  + 
Sbjct: 954  -DAKTDTELQTFKGHSDGVRSVAFSPDGQTIASGSYDRT----IKLWDPKTGTELQTFKG 1008

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGR 402
                     +SP G  IA   +      I +       E    +  +   ++  +SP G+
Sbjct: 1009 HSDGVRSVAFSPDGQTIASGSYDRT---IKLWDPKTGTELQTFKGHSDGVRSVAFSPDGQ 1065

Query: 403  SLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQ 441
            ++        D   KL+        +TL      + + A++ D Q
Sbjct: 1066 TIASGSY---DKTIKLWDARTGTELQTLKGHSDGVRSVAFSRDGQ 1107



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 85/253 (33%), Gaps = 21/253 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ SG    ++ + D                +    FSP+ Q +A  + D      + L
Sbjct: 897  QTIASGSSDTTIKLWDAKTGMELQTFKGHSSSVLSVAFSPDGQTIASGSSDK----TIKL 952

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D + D   +        + +  FS +G+    S   D  + ++  D ++    +     
Sbjct: 953  WDAKTDTELQTFKGHSDGVRSVAFSPDGQTIA-SGSYDRTIKLW--DPKTGTELQTFKGH 1009

Query: 302  FINI-SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               + S ++SPD   I   S DR     + +       + +  +          +SP G 
Sbjct: 1010 SDGVRSVAFSPDGQTIASGSYDRT----IKLWDPKTGTELQTFKGHSDGVRSVAFSPDGQ 1065

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSK 417
             IA   +      I +       E   ++  +   ++  +S  G+++        D   K
Sbjct: 1066 TIASGSYDKT---IKLWDARTGTELQTLKGHSDGVRSVAFSRDGQTIASGSY---DKTIK 1119

Query: 418  LYSIDLNGRNETL 430
            L+        +TL
Sbjct: 1120 LWDARTGTELQTL 1132



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ I  G     +  +LWD K   ++  + F       R +A   S D            
Sbjct: 938  GQTIASGSSDKTI--KLWDAKTDTEL--QTFKGHSDGVRSVA--FSPD------------ 979

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    +++ SG    ++ + D                +    FSP+ Q +A  +YD 
Sbjct: 980  -------GQTIASGSYDRTIKLWDPKTGTELQTFKGHSDGVRSVAFSPDGQTIASGSYDR 1032

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + L D +     +        + +  FS +G+    S   D+ + ++  D ++  
Sbjct: 1033 ----TIKLWDPKTGTELQTFKGHSDGVRSVAFSPDGQTIA-SGSYDKTIKLW--DARTGT 1085

Query: 294  TER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
              + L        S ++S D   I   S     + + +  +    + +  +    S
Sbjct: 1086 ELQTLKGHSDGVRSVAFSRDGQTIASGSY---DKTIKLWDARTGTELQTLKGHSVS 1138


>gi|196231115|ref|ZP_03129975.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Chthoniobacter flavus Ellin428]
 gi|196224945|gb|EDY19455.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Chthoniobacter flavus Ellin428]
          Length = 306

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 71/171 (41%), Gaps = 25/171 (14%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-- 323
           S   ++      +     ++   +  +  +++   LF       SPD +++ F ++ +  
Sbjct: 30  SP--RKLAYEKDR----RVWVASIDGSGAKKIGTGLF----PDISPDGTRVAFNTEEQTG 79

Query: 324 ---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + V++     Q         + + P WSP G  IAFT + G  +  G++  DG
Sbjct: 80  KTAWARHIAVVELASGKQTVFKDVPGDNAYYPRWSPDGTHIAFTLYDGHNWHFGLINADG 139

Query: 381 SQERLLVEDSNLQ----APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           +  + + +  + +    +P WSP G+SL F++         +Y I L+G  
Sbjct: 140 TGFKYIRKSKDAEGTLYSPCWSPDGKSL-FAQD-----MKNIYRIGLDGAT 184



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 82/271 (30%), Gaps = 34/271 (12%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED----I 236
           S   ++      + V   DG+  + +          P  SP+  +VA+ T +        
Sbjct: 30  SPRKLAYEKDRRVWVASIDGSGAKKIGTG-----LFPDISPDGTRVAFNTEEQTGKTAWA 84

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + +++    +              PR+S +G     ++          ++      + 
Sbjct: 85  RHIAVVELASGKQTVFKDVPGDNAYYPRWSPDGTHIAFTLYDGHNWHFGLINADGTGFKY 144

Query: 297 LTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR------ISQDKEA 347
           +  +        S  +SPD   + F  D    + +Y +  +G+  ++      I     +
Sbjct: 145 IRKSKDAEGTLYSPCWSPDGKSL-FAQDM---KNIYRIGLDGATLEQWDIKKCIPNGDMS 200

Query: 348 SYFDPVWSPQGDLIAFT----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-T 396
                  SP G  +              + G   A+  +     +   +           
Sbjct: 201 GDGRIDVSPDGQKLLLGIDMGEEAHRKDWDGPLPALWTLDLAAKKGTRITPKKLFGWDGC 260

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           W+    +++   +  G+  + LY + L G  
Sbjct: 261 WA-DNSTVLLLSQAVGEKTASLYKMTLPGGT 290


>gi|298240985|ref|ZP_06964792.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
            44963]
 gi|297554039|gb|EFH87903.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
            44963]
          Length = 1237

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 48/352 (13%), Positives = 98/352 (27%), Gaps = 57/352 (16%)

Query: 102  DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
             W++ GA                    RLWDV++ +                        
Sbjct: 813  AWSADGA---------TLASGCFDHAIRLWDVQEGRS----------------------- 840

Query: 162  IYQSITGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
              + +    G     + F S+S    SG    +L + + +      +       L +  +
Sbjct: 841  --RVVLSGHGAAVHSLAFTSDSRHLLSGSDDGTLRLWEVERGQCVRVLQGYAASLHDLAW 898

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+  ++            V + +         +      +    +S +G+  L++    
Sbjct: 899  SPDGTQLV----SGGTDTHVTVWEVASGMPRGVLRGHSRTVYGVAWSPDGR--LLASCGW 952

Query: 280  EAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDREGK--EQLYVMQSN 334
            +              + L      +      ++SPD  ++       G   + + V    
Sbjct: 953  DHAIRNWHPTTGACVQILGGLDHSDTVFSGVAWSPDGERLA-----SGTLLQGVLVWDGK 1007

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLV-EDSNL 392
                + +S+          WSP G  +      G    + V    DG+  + L      +
Sbjct: 1008 ARSPRWLSRQFPPWIRRVAWSPDGTRLV---GGGGDGHVYVWDASDGTLLQRLSGHQGAV 1064

Query: 393  QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             +  WSP+G  L      +      ++      R   L   P   S   W  
Sbjct: 1065 TSVAWSPNGSRLASGSGSNDRGEGFVWDAQRGERVFALAGHPGVVSAVAWSP 1116



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 98/329 (29%), Gaps = 44/329 (13%)

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA---------------HTISDDIYQS 165
                    RLW+V+  + +  +      AS   +A               H    ++   
Sbjct: 865  SGSDDGTLRLWEVERGQCV--RVLQGYAASLHDLAWSPDGTQLVSGGTDTHVTVWEVASG 922

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA--NIRYLT----------PSRDQI 213
            +       +SR ++       G +   L     D A  N    T             D +
Sbjct: 923  MPRGVLRGHSRTVYGVAWSPDGRL---LASCGWDHAIRNWHPTTGACVQILGGLDHSDTV 979

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                 +SP+ +++A  T        V + D +          F   I    +S +G R +
Sbjct: 980  FSGVAWSPDGERLASGTLLQG----VLVWDGKARSPRWLSRQFPPWIRRVAWSPDGTRLV 1035

Query: 274  ISVQKDEAMDIYSVDL-QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                      +Y  D       +RL+       S ++SP+ S++   S    + + +V  
Sbjct: 1036 ---GGGGDGHVYVWDASDGTLLQRLSGHQGAVTSVAWSPNGSRLASGSGSNDRGEGFVWD 1092

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            +   ++               WSP G  +  +  S  K     ++ +   +        +
Sbjct: 1093 AQRGERVFALAGHPGVVSAVAWSPCGKRLI-SGGSDGKVRWWEIQSEQCVQVQEGHQGAV 1151

Query: 393  QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             A   SP G  L        D    L+ +
Sbjct: 1152 HALKVSPDGGRLA---SCGDDGAIVLWDL 1177



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 65/405 (16%), Positives = 120/405 (29%), Gaps = 51/405 (12%)

Query: 73   LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK----DRLRVEF 128
            L  S     ++  S    +   D   R   W+      +V      +G            
Sbjct: 643  LAFSPDERQLASASSDGTVKLWDVESRALLWSGRHTSAIVGLAFSPDGDLLASGGHDASI 702

Query: 129  RLWDVKDRKQIIGKKFFSS------PASWRKIAHTISD-DIYQSITGEKGDFNSRILFVS 181
            R+WD K    +       +          R++A + SD  I        G    R     
Sbjct: 703  RVWDPKLGTPLQDVPHPGAVFALAWSPDGRRLASSGSDGHIQLWKRQPTGLAYDRQTLAG 762

Query: 182  ESVVSGIIKNS-----LCVMDRDG---------ANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +     +  S     L     DG                    Q +    +S +   +A
Sbjct: 763  HTHWVRGLAFSPDGSVLASAGWDGNVNLWELASGRCAQTLKGHTQRVHCVAWSADGATLA 822

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
               +D      + L D +  R+   +    + + +  F+S+ +  L S   D  + ++ V
Sbjct: 823  SGCFDH----AIRLWDVQEGRSRVVLSGHGAAVHSLAFTSDSRHLL-SGSDDGTLRLWEV 877

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKE 346
            + +      L          ++SPD +Q+V      G +  + V +      + + +   
Sbjct: 878  E-RGQCVRVLQGYAASLHDLAWSPDGTQLV----SGGTDTHVTVWEVASGMPRGVLRGHS 932

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLL----VEDSNLQAPTWSPSG 401
             + +   WSP G L+A     G   AI           ++L      D+      WSP G
Sbjct: 933  RTVYGVAWSPDGRLLASC---GWDHAIRNWHPTTGACVQILGGLDHSDTVFSGVAWSPDG 989

Query: 402  RSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
              L       G     +   D   R+   ++   P +     W  
Sbjct: 990  ERLA-----SGTLLQGVLVWDGKARSPRWLSRQFPPWIRRVAWSP 1029



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 88/251 (35%), Gaps = 15/251 (5%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  + V    G  +  +  +    ++   FSP+++++A A+ D      V L D    
Sbjct: 614 SGRGEVRVWREAGQTLHLVWSAHADSVWALAFSPDERQLASASSDG----TVKLWDVE-S 668

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           RA    G   S I+   FS +G              I   D +     +         + 
Sbjct: 669 RALLWSGRHTSAIVGLAFSPDGDLLA---SGGHDASIRVWDPKLGTPLQDVPHPGAVFAL 725

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKF 366
           ++SPD  ++   S  +G  QL+  Q  G    R +      +     +SP G ++A   +
Sbjct: 726 AWSPDGRRLA-SSGSDGHIQLWKRQPTGLAYDRQTLAGHTHWVRGLAFSPDGSVLASAGW 784

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            G    +  +      + L      +    WS  G +L        D   +L+ +   GR
Sbjct: 785 DG-NVNLWELASGRCAQTLKGHTQRVHCVAWSADGATLA---SGCFDHAIRLWDV-QEGR 839

Query: 427 NETLINTPAYA 437
           +  +++    A
Sbjct: 840 SRVVLSGHGAA 850


>gi|301163576|emb|CBW23127.1| putative exported aminopeptidase [Bacteroides fragilis 638R]
          Length = 702

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 64/390 (16%), Positives = 132/390 (33%), Gaps = 78/390 (20%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDV---KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            G +      +     V +  + V   K  +++       +    R+I HT     YQ  
Sbjct: 55  IGGLAVSPDGKQIAYTVAY--YSVPENKSNREVFVMNADGTDN--RQITHTP----YQEN 106

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                   S++LF+S    +    + L  M+ DG+  + ++     I      SP+ +K+
Sbjct: 107 EVTWAADGSKLLFLS----NDNGSSQLYEMNPDGSGRKQISKYDGDIEGY-SISPDGKKI 161

Query: 227 AY--------------------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---- 262
            +                          D++  +  +         I +F    ++    
Sbjct: 162 LFIAQVKTVKSTADKYPDLDKATGIIITDLMYKHWDEWVTTAPHPFIADFDGKSISNIID 221

Query: 263 ------------P-------RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATE 295
                       P        +++   +   + +K            DIY  DL +  T 
Sbjct: 222 VLEGEPYESPMKPWGGIEQLAWNTTSDKVAYTCRKKTGLAYAISTNSDIYVYDLNTKKTV 281

Query: 296 RLTNTL-FINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASY 349
            +T  +   + +  YSPD   I ++S +R+G    + +L+VM     +++ +S+  +++ 
Sbjct: 282 NITEGMMGYDTNPQYSPDGKSIAWQSMERDGYEADQNRLFVMNLETGEKRFVSKAFDSNV 341

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              VWS     I FT     +  I  +       R +           +  G  LI +++
Sbjct: 342 DAFVWSGDAKTIYFTGVWHGETQIYSLDLANDSVRPVTSGMYDYEGV-ALFGDKLI-AKR 399

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                G ++Y+I L+G+   L        D
Sbjct: 400 HSMSMGDEIYAIALDGQTTQLTQENKQIYD 429



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 86/248 (34%), Gaps = 63/248 (25%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S +GK+   +V      +     +++ ++       ++T+T +     +++ 
Sbjct: 53  GRIGGLAVSPDGKQIAYTVAYYSVPENKSNREVFVMNADGTDNRQITHTPYQENEVTWAA 112

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
           D S+++F S+  G  QLY M  +GS +K+IS+  +        SP G  I F        
Sbjct: 113 DGSKLLFLSNDNGSSQLYEMNPDGSGRKQISKY-DGDIEGYSISPDGKKILFIAQVKTVK 171

Query: 367 -SGEKF---------------------------AIGVMKKDGSQERLLVEDSNLQAPTWS 398
            + +K+                              +   DG     ++ D     P  S
Sbjct: 172 STADKYPDLDKATGIIITDLMYKHWDEWVTTAPHPFIADFDGKSISNII-DVLEGEPYES 230

Query: 399 PS--------------GRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTP--AY 436
           P                  + ++ RKK G      T S +Y  DLN +    I      Y
Sbjct: 231 PMKPWGGIEQLAWNTTSDKVAYTCRKKTGLAYAISTNSDIYVYDLNTKKTVNITEGMMGY 290

Query: 437 ASDPQWVG 444
            ++PQ+  
Sbjct: 291 DTNPQYSP 298


>gi|255931451|ref|XP_002557282.1| Pc12g04110 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581901|emb|CAP80038.1| Pc12g04110 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1348

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 53/316 (16%), Positives = 118/316 (37%), Gaps = 28/316 (8%)

Query: 112  VTGRVIKEGKDRLRVEFRLWDV--KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
             TG + K     L    R+W V      Q++      S     ++ ++ +  I+Q++ G 
Sbjct: 868  ATGALQKIIDGHLD---RVWSVTFSPDSQLLA---SGSDDYIIRLWNSTTGAIHQTLEGH 921

Query: 170  KGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G   S     +  +  SG    ++C+ +     ++ +       +    FS + + +A 
Sbjct: 922  SGQVQSVAFTPNGELLASGSADKTICLWNLTTGTLQQVLEGHTHWVRSVAFSSDGKLLAS 981

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             ++D      V L +T      + +      + +  FS++  R LIS   D+ + ++  D
Sbjct: 982  GSHDR----TVRLWNTMTGALQQTLEGHMQPVSSVAFSTD-SRLLISGSCDQTVRLW--D 1034

Query: 289  LQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +   A +++ +  L    S ++SPD   +   S     + + V  +     ++  +   A
Sbjct: 1035 VMIGAVQQIPDSHLGDVTSMAFSPDGQLLASGST---DKSVRVWDTTTGRLQQTLKGHIA 1091

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
                  +SP G L+A          + +        +  +E  +    +  +SP G+ L 
Sbjct: 1092 EVQSVAFSPDGRLVASGSRDT---IVCLWDLTTGALQHTLEGHSESIFSVAFSPDGQLLA 1148

Query: 406  FSRKKDGDTGSKLYSI 421
                   D   +L+ +
Sbjct: 1149 ---SGSADKSVRLWDM 1161



 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 78/223 (34%), Gaps = 16/223 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +       ++         +    FSPN Q +A+   D+     V L D  
Sbjct: 771 SGSGDKTVRLWGTTTGALQQTLEGHLGSVHAVAFSPNSQLLAFGLDDN----TVRLWDLA 826

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFIN 304
                + +      + +  FS +G+    S   D  + ++  D  + A +++ +  L   
Sbjct: 827 TGVLKRTLEGHSRWVRSVAFSPDGRLLA-SSSDDHTVRLW--DPATGALQKIIDGHLDRV 883

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPDS  +   SD      + +  S      +  +          ++P G+L+A  
Sbjct: 884 WSVTFSPDSQLLASGSD---DYIIRLWNSTTGAIHQTLEGHSGQVQSVAFTPNGELLASG 940

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
                   I +        + ++E       +  +S  G+ L 
Sbjct: 941 SADKT---ICLWNLTTGTLQQVLEGHTHWVRSVAFSSDGKLLA 980



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 72/228 (31%), Gaps = 21/228 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +     SP+ + +A  + D      V L  T      + +      + A  FS
Sbjct: 750 LEGHLDWVQSVAISPDGRLLASGSGDK----TVRLWGTTTGALQQTLEGHLGSVHAVAFS 805

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
            N +     +  D  + ++  DL +   +R L        S ++SPD   +   SD    
Sbjct: 806 PNSQLLAFGLD-DNTVRLW--DLATGVLKRTLEGHSRWVRSVAFSPDGRLLASSSD---D 859

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +        ++I        +   +SP   L+A      + + I +          
Sbjct: 860 HTVRLWDPATGALQKIIDGHLDRVWSVTFSPDSQLLA---SGSDDYIIRLWNSTTGAIHQ 916

Query: 386 LVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +E     +Q+  ++P+G  L       G     +   +L       +
Sbjct: 917 TLEGHSGQVQSVAFTPNGELLA-----SGSADKTICLWNLTTGTLQQV 959



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 69/201 (34%), Gaps = 14/201 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    S+ V D     ++         +    FSP+ + VA  + D      V L D  
Sbjct: 1065 SGSTDKSVRVWDTTTGRLQQTLKGHIAEVQSVAFSPDGRLVASGSRDT----IVCLWDLT 1120

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                   +      I +  FS +G+    S   D+++ ++  D+++   ++ L       
Sbjct: 1121 TGALQHTLEGHSESIFSVAFSPDGQLLA-SGSADKSVRLW--DMKTGMLQQALKAHSKYV 1177

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++SPD   +   S  +G   L  + +    +++  +          + P G L    
Sbjct: 1178 YSVAFSPDGRLLA-SSSADGIWHL--LDTTVRAREQTLEGLSGWVQSVAFPPNGRL---E 1231

Query: 365  KFSGEKFAIGVMKKDGSQERL 385
                +   + +      + + 
Sbjct: 1232 PRPSDDSNVRLWDTMTGELQR 1252



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 62/195 (31%), Gaps = 29/195 (14%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     R+WD    +  + +      A  + +A   S D              R++ 
Sbjct: 1064 ASGSTDKSVRVWDTTTGR--LQQTLKGHIAEVQSVA--FSPD-------------GRLV- 1105

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                  SG     +C+ D     +++      + +F   FSP+ Q +A  + D      V
Sbjct: 1106 -----ASGSRDTIVCLWDLTTGALQHTLEGHSESIFSVAFSPDGQLLASGSADK----SV 1156

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             L D +     + +      + +  FS +G+    S   D    +    +++     L  
Sbjct: 1157 RLWDMKTGMLQQALKAHSKYVYSVAFSPDGRLLA-SSSADGIWHLLDTTVRAREQT-LEG 1214

Query: 300  TLFINISASYSPDSS 314
                  S ++ P+  
Sbjct: 1215 LSGWVQSVAFPPNGR 1229



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 12/145 (8%)

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           S   + L   L    S + SPD   +   S   G + + +  +     ++  +    S  
Sbjct: 744 SAGLQALEGHLDWVQSVAISPDGRLLASGS---GDKTVRLWGTTTGALQQTLEGHLGSVH 800

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSR 408
              +SP   L+AF         + +        +  +E  +    +  +SP GR L  S 
Sbjct: 801 AVAFSPNSQLLAFGLDDNT---VRLWDLATGVLKRTLEGHSRWVRSVAFSPDGRLLASSS 857

Query: 409 KKDGDTGSKLYSIDLNGRNETLINT 433
               D   +L+     G  + +I+ 
Sbjct: 858 D---DHTVRLWD-PATGALQKIIDG 878


>gi|108757165|ref|YP_629910.1| WD domain-/G-beta repeat-containing protein [Myxococcus xanthus DK
           1622]
 gi|108461045|gb|ABF86230.1| WD domain G-beta repeat protein [Myxococcus xanthus DK 1622]
          Length = 786

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 79/195 (40%), Gaps = 11/195 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A  +++DE  +R++  D       +++      + +  +S +G R   S  
Sbjct: 127 AFSPSGDWLATGSWEDERNVRIW--DVATGTLIRQLAGHEGEVRSVAWSPDGTRLA-SGS 183

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +D    I+  D+++      +T       S ++SPD   +   +      ++ +      
Sbjct: 184 RDHDARIW--DVETGELLHAMTRQEGQVTSVAFSPDGRWLAAANL---GWRVRLFDVTSG 238

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            + R  +  E S     + P G  +A +  S +   I  ++  G+Q   +   +++ +  
Sbjct: 239 REVRTLEGHEQSVLTVAFHPSGRWLA-SGASDDTVRIWDLET-GTQTAHIRSTTSVSSVA 296

Query: 397 WSPSGRSLIFSRKKD 411
           +SP G  L+ +    
Sbjct: 297 FSPDGDWLVLTSMDG 311



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 74/200 (37%), Gaps = 18/200 (9%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYS 310
           ++    + +L   FS +G     +   ++  ++   D+ +     +L        S ++S
Sbjct: 115 QVLRHGAQVLCAAFSPSGDWLA-TGSWEDERNVRIWDVATGTLIRQLAGHEGEVRSVAWS 173

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD +++   S R+   +++       +       +E       +SP G  +A        
Sbjct: 174 PDGTRLASGS-RDHDARIW--DVETGELLHAMTRQEGQVTSVAFSPDGRWLAAANL---G 227

Query: 371 FAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG--- 425
           + + +      +E   +E          + PSGR L        D   +++ ++      
Sbjct: 228 WRVRLFDVTSGREVRTLEGHEQSVLTVAFHPSGRWLA---SGASDDTVRIWDLETGTQTA 284

Query: 426 --RNETLINTPAYASDPQWV 443
             R+ T +++ A++ D  W+
Sbjct: 285 HIRSTTSVSSVAFSPDGDWL 304



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 53/180 (29%), Gaps = 12/180 (6%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + ++ + D     +       +  +    +SP+  ++A  + D        + D      
Sbjct: 143 ERNVRIWDVATGTLIRQLAGHEGEVRSVAWSPDGTRLASGSRDH----DARIWDVETGEL 198

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISAS 308
              +      + +  FS +G+        +    +   D+ S    R L       ++ +
Sbjct: 199 LHAMTRQEGQVTSVAFSPDGRWLA---AANLGWRVRLFDVTSGREVRTLEGHEQSVLTVA 255

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + P    +         + + +       Q         S     +SP GD +  T   G
Sbjct: 256 FHPSGRWLA---SGASDDTVRIWDLETGTQTA-HIRSTTSVSSVAFSPDGDWLVLTSMDG 311



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 76/226 (33%), Gaps = 22/226 (9%)

Query: 199 DGANIRYLTPSRDQILFEPRF--SPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRI 253
           D        P      +   +  SP+   +A    ++++    L + L+D R     + +
Sbjct: 438 DSQGQATALPPGSPAAYAQTWQVSPDGAWLAQPELSSHERRYRLGILLLDARSLAPVRTL 497

Query: 254 GNFRSMILAPR-----------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                   A             FS +GK    +++ + A+ ++ V        RL     
Sbjct: 498 LAPPGEQAAKAQTLLVNKLPIAFSPDGKLLAAAIE-EGAVHLWRV-ADGTLLHRLRGPGG 555

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 ++PD + +V  S     E++YV +  G      ++           +    +I 
Sbjct: 556 PITWVDFTPDGTCVV--SGHAASERVYVHEVRGGKVIVNTEAVVEPSPAYAAAASAPVIV 613

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             + SGE   I +    G+Q+ L V    + A   S  G  +  S 
Sbjct: 614 VGRASGELVLITL--PTGAQQVLTVSQEPVIALGLSADGTRVAASS 657



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 99/334 (29%), Gaps = 59/334 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR +       RV  RL+DV   +++  +       S   +A               G +
Sbjct: 218 GRWLAAANLGWRV--RLFDVTSGREV--RTLEGHEQSVLTVA-----------FHPSGRW 262

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                       SG   +++ + D +    +         +    FSP+   +   + D 
Sbjct: 263 L----------ASGASDDTVRIWDLE-TGTQTAHIRSTTSVSSVAFSPDGDWLVLTSMDG 311

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSN 292
                + +      R P  +G      +A           +   +  A+    V+ L + 
Sbjct: 312 ----LIRVETAGWTRVPGALGQGPYSQVA----------WLEGARLGALAFNRVELLDAR 357

Query: 293 ATERLTNTL----FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             E L             A++ P   +    +   G+  +  + ++ S      QD+  +
Sbjct: 358 NGEVLRAHPYPSDGRERGAAFLPSGKRFALTA-ANGRTHVRDLDADPSPTLLAEQDRVMN 416

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPSGRSLIF 406
            +      +G        S  +    V+   G    L        A TW  SP G  L  
Sbjct: 417 LWGHA---EGAWGITRLHSETR----VIDSQGQATALPPGSPAAYAQTWQVSPDGAWLAQ 469

Query: 407 SRKKDGDTGSKLYSIDLNGRN----ETLINTPAY 436
                 +   +L  + L+ R+     TL+  P  
Sbjct: 470 PELSSHERRYRLGILLLDARSLAPVRTLLAPPGE 503


>gi|21228038|ref|NP_633960.1| hypothetical protein MM_1936 [Methanosarcina mazei Go1]
 gi|20906471|gb|AAM31632.1| conserved protein [Methanosarcina mazei Go1]
          Length = 374

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 83/221 (37%), Gaps = 12/221 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   + +    D +   +Y+ D    R    + N     + P  S  G R +++  +   
Sbjct: 51  SGDYIVWQDERDGN-WDIYMYDMSAGRTETSLFNGPKDEIEPAIS--GSRVVLADNRRGN 107

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIY  D+ +    ++T+        + S D   IV+   R     +Y+      ++ RI
Sbjct: 108 YDIYMYDISTKKEVQVTSDKSEQKEPAISED--IIVWTDRRNQNTDIYMYDLTTKEETRI 165

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPS 400
           + DK       VW   G++I +         I +     G +  ++++ +    P     
Sbjct: 166 TDDKADQSQPAVW---GNIIVWKDTRNGNEDIYMYDISAGKESPVVMDSAAQTNPVI--E 220

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           G  +++  ++ G+    +Y I   G+ + +   P+    P 
Sbjct: 221 GDYIVWEDRRAGNLDIYMYEIS-TGKEKPVCTDPSPQKTPA 260



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 89/258 (34%), Gaps = 21/258 (8%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E     SR++       +      + + D        +T  + +   EP  S +   +  
Sbjct: 90  EPAISGSRVVLADNRRGN----YDIYMYDISTKKEVQVTSDKSE-QKEPAISED---IIV 141

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKDEAMDIYSV 287
            T        +Y+ D    +   RI + ++    P  +   G   +    ++   DIY  
Sbjct: 142 WTDRRNQNTDIYMYDL-TTKEETRITDDKADQSQPAVW---GNIIVWKDTRNGNEDIYMY 197

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D+ +     +        +     +   IV+E  R G   +Y+ + +   +K +  D  +
Sbjct: 198 DISAGKESPVVMDSAAQTNPVI--EGDYIVWEDRRAGNLDIYMYEISTGKEKPVCTD-PS 254

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIF 406
               P  S  G  I +     +   I +      QE+ +   S  ++ P+    G  +++
Sbjct: 255 PQKTPAIS-DGR-IVWADGRIKGTNIFIYDIATGQEKTVSTASEYESNPSI--DGNRIVW 310

Query: 407 SRKKDGDTGSKLYSIDLN 424
             K+ G     +++ D +
Sbjct: 311 QDKRKGAMDIFMFTEDAS 328



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 62/197 (31%), Gaps = 16/197 (8%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + + D        +T  +        +      + +    + +   +Y+ D    
Sbjct: 147 NQNTDIYMYDLTTKEETRITDDKADQSQPAVW---GNIIVWKDTRNGNE-DIYMYDISAG 202

Query: 248 RAPKRIGNFRSMILAPRFSS--NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           +    +     M  A + +    G   +   ++   +DIY  ++ +   + +        
Sbjct: 203 KESPVV-----MDSAAQTNPVIEGDYIVWEDRRAGNLDIYMYEISTGKEKPVCTDPSPQK 257

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + + S D  +IV+   R     +++       +K +S   E        S  G+ I +  
Sbjct: 258 TPAIS-DG-RIVWADGRIKGTNIFIYDIATGQEKTVSTASEYESNP---SIDGNRIVWQD 312

Query: 366 FSGEKFAIGVMKKDGSQ 382
                  I +  +D S+
Sbjct: 313 KRKGAMDIFMFTEDASE 329



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 49/117 (41%), Gaps = 6/117 (5%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              + +      + L +Y+ +    +  K +    S    P  S +G R + +  + +  
Sbjct: 221 GDYIVWEDRRAGN-LDIYMYEISTGKE-KPVCTDPSPQKTPAIS-DG-RIVWADGRIKGT 276

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +I+  D+ +   + ++       + S   D ++IV++  R+G   +++   + S+ +
Sbjct: 277 NIFIYDIATGQEKTVSTASEYESNPSI--DGNRIVWQDKRKGAMDIFMFTEDASETE 331


>gi|255531702|ref|YP_003092074.1| amidohydrolase [Pedobacter heparinus DSM 2366]
 gi|255344686|gb|ACU04012.1| amidohydrolase [Pedobacter heparinus DSM 2366]
          Length = 1052

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 70/187 (37%), Gaps = 17/187 (9%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                  ++   S +GK  +  +  D    +Y+V  +     ++T  + IN    +SPD 
Sbjct: 35  TTKEGSNMSVDLSPDGKTVVFCLLGD----LYTVSSKGGIATQITRGIAINDLPVWSPDG 90

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +I + SDR G ++L V   +G+  +  + + +       + P  D +  +      + +
Sbjct: 91  KRIAYISDRSGDDRLTVRNVSGNAIQ--TFEGKLPGVPVWFGPN-DWVTTSNDFDRHYPL 147

Query: 374 GVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS-IDLNGRNETL 430
                 G +    V+DS   +    +S   + + +   ++      +Y      G  + L
Sbjct: 148 Y--HLTGGE----VDDSKNISNVVGFSSDYKFIYYM-HREASNSLVIYQHAKSRGEEKIL 200

Query: 431 INTPAYA 437
           I     A
Sbjct: 201 IELQGIA 207



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 68/179 (37%), Gaps = 23/179 (12%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S  G++ + S        IY +DL       L    F     ++S D   I F S  + +
Sbjct: 331 SPEGRQLVFSA----LNRIYIMDLPGGKPRILVKQPFSQFQPAWSADGQWITFVSWSDAE 386

Query: 326 -EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--------------KFSGEK 370
             Q++ +  NG    +IS  K   Y  P WSP G  IA T              +     
Sbjct: 387 FGQVWKVDKNGDSLTQISH-KAGVYHYPNWSPDGKSIAVTKGRKVWQGKPMLGDRDGPGI 445

Query: 371 FAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTG--SKLYSIDLNGR 426
             +  ++     ++++ +        T+S +G  LI++  + G +G    L S D  G+
Sbjct: 446 GQLITLELQNGNQKVIADSVPLSNRTTFSANGEGLIYAPSRVGKSGVFPFLVSKDQEGK 504



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 88/258 (34%), Gaps = 46/258 (17%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP  +++ ++  +     R+Y+MD      P+ +         P +S++G+        D
Sbjct: 331 SPEGRQLVFSALN-----RIYIMDL-PGGKPRILVKQPFSQFQPAWSADGQWITFVSWSD 384

Query: 280 -EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------------SDREGKE 326
            E   ++ VD   ++  ++++   +    ++SPD   I                DR+G  
Sbjct: 385 AEFGQVWKVDKNGDSLTQISHKAGVYHYPNWSPDGKSIAVTKGRKVWQGKPMLGDRDGPG 444

Query: 327 --QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMKKDGS 381
             QL  ++    +QK I+ D         +S  G+ + +          F   V K    
Sbjct: 445 IGQLITLELQNGNQKVIA-DSVPLSNRTTFSANGEGLIYAPSRVGKSGVFPFLVSKDQEG 503

Query: 382 QERLLVEDSNLQAPTW--------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +  +L         +         SP GR  ++      +    L  +D +G    L +T
Sbjct: 504 KVNVLATARYEGIGSELFLRQIIQSPDGRYFVYL----NEENLHLVPVDPSGAPTILYDT 559

Query: 434 PAYAS---------DPQW 442
                         DP W
Sbjct: 560 EKKNPVIRFAKGGFDPHW 577



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 64/173 (36%), Gaps = 16/173 (9%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               +  + +Q+      T     N+S   SPD   +VF         LY + S G    
Sbjct: 17  GNAGLAQLPIQAERAVSFTTKEGSNMSVDLSPDGKTVVFCL----LGDLYTVSSKGGIAT 72

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-S 398
           +I++    +   PVWSP G  IA+         + V    G+  +   E      P W  
Sbjct: 73  QITRGIAINDL-PVWSPDGKRIAYISDRSGDDRLTVRNVSGNAIQ-TFEGKLPGVPVWFG 130

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRN----ETLINTPAYASDPQWVGFMD 447
           P+   +  +   D D    LY   L G      + + N   ++SD +++ +M 
Sbjct: 131 PN-DWV--TTSNDFDRHYPLYH--LTGGEVDDSKNISNVVGFSSDYKFIYYMH 178



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 70/219 (31%), Gaps = 22/219 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + V +      D+  V    +       +I    ++   P +S +GKR      + 
Sbjct: 47  SPDGKTVVFCLL--GDLYTV----SSKGGIATQITRGIAINDLPVWSPDGKRIAYISDRS 100

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               +   ++  NA +  T    +     +   +  +   +D +    LY     G +  
Sbjct: 101 GDDRLTVRNVSGNAIQ--TFEGKLPGVPVWFGPNDWVTTSNDFDRHYPLY--HLTGGEV- 155

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVEDSNLQAPT-- 396
               D +       +S     I +          I    K   +E++L+E   + A    
Sbjct: 156 ---DDSKNISNVVGFSSDYKFIYYMHREASNSLVIYQHAKSRGEEKILIELQGIAAKAAK 212

Query: 397 ---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
               S     L +   +       L  +DL+ + E ++ 
Sbjct: 213 RIKVSQDCNWLSYLMTEG--VWCSLRLVDLSSKKERVLA 249



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 111/359 (30%), Gaps = 88/359 (24%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           S T ++G   S  L      V   +   L  +   G     +T     I   P +SP+ +
Sbjct: 33  SFTTKEGSNMSVDLSPDGKTVVFCLLGDLYTVSSKGGIATQITRG-IAINDLPVWSPDGK 91

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++AY +    D  R+ + +   +      G    +   P +   G    ++   D     
Sbjct: 92  RIAYISDRSGD-DRLTVRNVSGNAIQTFEGKLPGV---PVWF--GPNDWVTTSNDFDRHY 145

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM---QSNGSDQKRI 341
               L     +   ++  I+    +S D   I +   RE    L +    +S G ++  I
Sbjct: 146 PLYHLTGGEVD---DSKNISNVVGFSSDYKFIYYM-HREASNSLVIYQHAKSRGEEKILI 201

Query: 342 SQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--------DSN 391
                A+        S   + +++    G   ++ ++     +ER+L           ++
Sbjct: 202 ELQGIAAKAAKRIKVSQDCNWLSYLMTEGVWCSLRLVDLSSKKERVLARWEQHVPGIGNS 261

Query: 392 LQAPTWSPSGRSLI---------------------FSRKKDGDTG--------------- 415
           L    +S   + ++                     F+     D G               
Sbjct: 262 LPNYNFSGDSKKILIGYGGKIHMIEIRTGKDEIIPFTANVKVDMGKPNTATFKVSQDSLQ 321

Query: 416 ---------------------SKLYSIDLNGRNETLIN-------TPAYASDPQWVGFM 446
                                +++Y +DL G    ++         PA+++D QW+ F+
Sbjct: 322 VKYMRSACASPEGRQLVFSALNRIYIMDLPGGKPRILVKQPFSQFQPAWSADGQWITFV 380


>gi|15789658|ref|NP_279482.1| hypothetical protein VNG0409C [Halobacterium sp. NRC-1]
 gi|169235372|ref|YP_001688572.1| acylaminoacyl-peptidase [Halobacterium salinarum R1]
 gi|10580022|gb|AAG18962.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
 gi|167726438|emb|CAP13223.1| putative acylaminoacyl-peptidase [Halobacterium salinarum R1]
          Length = 598

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 90/272 (33%), Gaps = 20/272 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMD- 243
            G     L  +  DG+    LT   D       +S +  ++AY     +     VY+   
Sbjct: 76  GGDEFTQLHRVSGDGSEDVQLTAFPDAKHDWGGWSHDGDRIAYTANRRDASRFDVYVQGR 135

Query: 244 --TRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                +    R+G+   +     +S  + +  ++    +   D+  +D+ +    R T  
Sbjct: 136 DEAGANADCVRVGDTFDLPSVVGWSPSDDRLLVVDTHSNFDQDVAVLDVDTGEITRATAG 195

Query: 301 LFINISAS---YSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L  +   S   ++PD   +   +D +   + L ++        R++   +      V + 
Sbjct: 196 LDADTRFSWVAWAPDGGGVYVTTDHDADTRYLGLLDPETGAISRVADGGDWPIEAVVTAH 255

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-------TWSPSGRSLIFSRK 409
               +A+ +       + +    G+    L E    + P       +W P G +L     
Sbjct: 256 DAGRLAYVRNRDGYSELTIADAAGT---TLTEQPTPELPDGVIRGLSWGPDGDTLAVVVS 312

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                   ++ +D+     T     A A  P+
Sbjct: 313 -AATENPNVFVVDVATGAATQWTNAATAGIPK 343



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 72/192 (37%), Gaps = 12/192 (6%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +   G     ++       ++++        +LT        AS+SP   ++ +  D 
Sbjct: 17  PTYGPTG-ELAFTLGTTGTAQVWALGAPGAWPTQLTFHDERVQWASFSPTREELAYGMDT 75

Query: 323 EGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKK 378
            G E  QL+ +  +GS+  +++   +A +    WS  GD IA+T  +    +F + V  +
Sbjct: 76  GGDEFTQLHRVSGDGSEDVQLTAFPDAKHDWGGWSHDGDRIAYTANRRDASRFDVYVQGR 135

Query: 379 D--GSQERLLVEDSNLQAPT---WSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           D  G+    +        P+   WSP   R L+     + D    +  +D  G       
Sbjct: 136 DEAGANADCVRVGDTFDLPSVVGWSPSDDRLLVVDTHSNFDQDVAVLDVD-TGEITRATA 194

Query: 433 TPAYASDPQWVG 444
                +   WV 
Sbjct: 195 GLDADTRFSWVA 206



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 62/213 (29%), Gaps = 17/213 (7%)

Query: 188 IIKNSLCVMDRDGANIRYLTPS--RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                + V+D D   I   T     D       ++P+   V   T  D D   + L+D  
Sbjct: 174 NFDQDVAVLDVDTGEITRATAGLDADTRFSWVAWAPDGGGVYVTTDHDADTRYLGLLDPE 233

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTL--F 302
                +        I A   + +  R      +D   ++   D        + T  L   
Sbjct: 234 TGAISRVADGGDWPIEAVVTAHDAGRLAYVRNRDGYSELTIADAAGTTLTEQPTPELPDG 293

Query: 303 INISASYSPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW------- 354
           +    S+ PD   + V  S       ++V+        + +    A      +       
Sbjct: 294 VIRGLSWGPDGDTLAVVVSAATENPNVFVVDVATGAATQWTNAATAGIPKSTFREPELVR 353

Query: 355 --SPQGDLI--AFTKFSGEKFAIGVMKKDGSQE 383
             +  G  I   FT+  G+     ++   G  E
Sbjct: 354 YETFDGREIPALFTRPDGDGPHPVIVDFHGGPE 386


>gi|329946152|ref|ZP_08293765.1| WD domain, G-beta repeat protein [Actinomyces sp. oral taxon 170
           str. F0386]
 gi|328527750|gb|EGF54741.1| WD domain, G-beta repeat protein [Actinomyces sp. oral taxon 170
           str. F0386]
          Length = 1306

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/329 (13%), Positives = 107/329 (32%), Gaps = 40/329 (12%)

Query: 129 RLWDVKDRKQII--------GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
           R+WDV    +++        G+     P         I     + +TG     +SR +  
Sbjct: 166 RVWDVTTGTELLRVGPMAFVGRGGTVGPDGKPTHIGPI-----EPMTGLSWSPDSRRIIT 220

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +       + ++       G  +  L     + +    +SP+  ++     DD      +
Sbjct: 221 AFDSAEPRVWDA-----ATGEEVLSLHGRERRWVSVVSWSPDGSRIV---TDDISGTTAH 272

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D         +        +  +S + +R   +   D+ + ++  D  +    +L   
Sbjct: 273 VWDAATGEELFSLRGHTQWACSLAWSPDSRRVA-TGSHDDTVRVW--DAATGQ-TQLVLG 328

Query: 301 LFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              ++   S+SPD +++   +   G     V  +   + +    +      + VWSP G 
Sbjct: 329 AGNSVETVSWSPDGTKLTIGAKIGGN---RVWDAATGEPRLTVDNGARELSEVVWSPDGT 385

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A + +   +  I +    G   + L    +      WSP    ++      GD  + +
Sbjct: 386 RLATSSYLSPRVLI-LDAATGDVVQALTAGEDDVNDVAWSPDSERIL---SGLGDNRAAI 441

Query: 419 YSIDLNGRNETLINTPAY---ASDPQWVG 444
           +        E L+    +    +   W  
Sbjct: 442 WDAT---TGERLLTLEGHRDMITSVAWSP 467



 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 45/338 (13%), Positives = 106/338 (31%), Gaps = 38/338 (11%)

Query: 129 RLWDVKDRKQIIG-----KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--- 180
           R+WD    ++++      +++ S  +     +  ++DDI  +            LF    
Sbjct: 228 RVWDAATGEEVLSLHGRERRWVSVVSWSPDGSRIVTDDISGTTAHVWDAATGEELFSLRG 287

Query: 181 -------------SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                        S  V +G   +++ V D      + +  + + +     +SP+  K+ 
Sbjct: 288 HTQWACSLAWSPDSRRVATGSHDDTVRVWDAATGQTQLVLGAGNSVETV-SWSPDGTKLT 346

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                  +     + D         + N    +    +S +G R   S     +  +  +
Sbjct: 347 IGAKIGGNR----VWDAATGEPRLTVDNGARELSEVVWSPDGTRLATSSYL--SPRVLIL 400

Query: 288 DLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D  +    + LT         ++SPDS +I+      G  +  +  +   ++    +   
Sbjct: 401 DAATGDVVQALTAGEDDVNDVAWSPDSERIL---SGLGDNRAAIWDATTGERLLTLEGHR 457

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                  WSP G  +      G      +      +       + ++   W+  G  ++ 
Sbjct: 458 DMITSVAWSPNGQRVLTGSQDGTA---RIWDATTGEVIHTYTGNWVRDVVWTQGGPRVV- 513

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                 D  + ++ +  +G   TL +  A      W  
Sbjct: 514 --TGSADGAAHVWDVITSGELVTLRDDAAMVRSYAWNP 549



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 88/284 (30%), Gaps = 41/284 (14%)

Query: 186 SGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           +    +S+ V D   GA++  L      +     +SP+  ++        D     + D 
Sbjct: 73  TAAEDHSVRVWDATTGADLLTLGVGGSGVGGAVAWSPDSTRI----LTGFDDASARIWDA 128

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--------- 295
              +  + +      + A  +S +G R   +   D    ++ V   +             
Sbjct: 129 SSGQVVRTLSGHTEHLTAVSWSPDGTRVA-TASDDGTARVWDVTTGTELLRVGPMAFVGR 187

Query: 296 --------RLTNTLFIN--ISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQ 343
                   + T+   I      S+SPDS +I   F+S      +  V  +   ++     
Sbjct: 188 GGTVGPDGKPTHIGPIEPMTGLSWSPDSRRIITAFDS-----AEPRVWDAATGEEVLSLH 242

Query: 344 DKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPS 400
            +E  +   V WSP G  I     SG    +        +E   L        +  WSP 
Sbjct: 243 GRERRWVSVVSWSPDGSRIVTDDISGTTAHVW--DAATGEELFSLRGHTQWACSLAWSPD 300

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            R +      D     +++     G+ + ++          W  
Sbjct: 301 SRRVATGSHDD---TVRVWDA-ATGQTQLVLGAGNSVETVSWSP 340



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 87/289 (30%), Gaps = 42/289 (14%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  +++G    S  + D     +        + L    +SP+  +VA A+ D    +   
Sbjct: 111 STRILTGFDDASARIWDASSGQVVRTLSGHTEHLTAVSWSPDGTRVATASDDGTARVWDV 170

Query: 241 LMDTRIDRAPKRIGNFRSMILAP----------------RFSSNGKRALISVQ------K 278
              T + R        R   + P                 +S + +R + +         
Sbjct: 171 TTGTELLRVGPMAFVGRGGTVGPDGKPTHIGPIEPMTGLSWSPDSRRIITAFDSAEPRVW 230

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D A     + L       ++         S+SPD S+IV   D  G    +V  +   ++
Sbjct: 231 DAATGEEVLSLHGRERRWVSVV-------SWSPDGSRIV-TDDISGTTA-HVWDAATGEE 281

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTW 397
               +          WSP    +A          + V      Q +L++   N ++  +W
Sbjct: 282 LFSLRGHTQWACSLAWSPDSRRVATGSHDDT---VRVWDAATGQTQLVLGAGNSVETVSW 338

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA--YASDPQWVG 444
           SP G  L    K  G+        D       L         S+  W  
Sbjct: 339 SPDGTKLTIGAKIGGNRVW-----DAATGEPRLTVDNGARELSEVVWSP 382



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 85/263 (32%), Gaps = 37/263 (14%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L       L+   +SP+  ++   ++D        + D         +      I A  
Sbjct: 8   SLYAGHFDALWGVAWSPDGTRLLSGSHDG----TARVWDANRGTELFALAGPSLSISAVA 63

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDR 322
           +S +G R L +  +D ++ ++  D  + A           +  + ++SPDS++I+     
Sbjct: 64  WSPDGTRLL-TAAEDHSVRVW--DATTGADLLTLGVGGSGVGGAVAWSPDSTRIL-TGFD 119

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +   +++   ++     R             WSP G  +A     G    +  +      
Sbjct: 120 DASARIW--DASSGQVVRTLSGHTEHLTAVSWSPDGTRVATASDDGTA-RVWDVTTGTEL 176

Query: 383 ERL----LVEDSNLQAP----------------TWSPSGRSLIFSRKKDGDTGSKLYS-- 420
            R+     V       P                +WSP  R +I +            +  
Sbjct: 177 LRVGPMAFVGRGGTVGPDGKPTHIGPIEPMTGLSWSPDSRRIITAFDSAEPRVWDAATGE 236

Query: 421 --IDLNGRNETLINTPAYASDPQ 441
             + L+GR    ++  +++ D  
Sbjct: 237 EVLSLHGRERRWVSVVSWSPDGS 259



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 94/308 (30%), Gaps = 31/308 (10%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQ--IIGKKFFSSPASW-----------RKIAHTISDDI- 162
            +          R+WD    +   ++G        SW           +   + + D   
Sbjct: 302 RRVATGSHDDTVRVWDAATGQTQLVLGAGNSVETVSWSPDGTKLTIGAKIGGNRVWDAAT 361

Query: 163 -YQSITGEKGDFNSRILFVSESVVSGIIKNSL----CVMDRDGANIRYLTPSRDQILFEP 217
               +T + G      +  S         + L     ++D    ++     + +  + + 
Sbjct: 362 GEPRLTVDNGARELSEVVWSPDGTRLATSSYLSPRVLILDAATGDVVQALTAGEDDVNDV 421

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ +++     D+    R  + D         +   R MI +  +S NG+R L +  
Sbjct: 422 AWSPDSERILSGLGDN----RAAIWDATTGERLLTLEGHRDMITSVAWSPNGQRVL-TGS 476

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D    I+  D  +      T T        ++    ++V     +G   ++      S 
Sbjct: 477 QDGTARIW--DATTGEVIH-TYTGNWVRDVVWTQGGPRVV-TGSADGAAHVW--DVITSG 530

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +    +D  A      W+P G  +    F      +           L      +    W
Sbjct: 531 ELVTLRDDAAMVRSYAWNPDGTRVL-AGFDDGVVRVWDEVSGKVVLSLAGHRFGVTDAQW 589

Query: 398 SPSGRSLI 405
           SP G  ++
Sbjct: 590 SPDGTRVL 597



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 81/242 (33%), Gaps = 22/242 (9%)

Query: 161 DIYQSITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+ Q++T  + D N       SE ++SG+  N   + D               ++    +
Sbjct: 406 DVVQALTAGEDDVNDVAWSPDSERILSGLGDNRAAIWDATTGERLLTLEGHRDMITSVAW 465

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN Q+V   + D     R++   T             + +    ++  G R +++   D
Sbjct: 466 SPNGQRVLTGSQD--GTARIWDATTGEVIH----TYTGNWVRDVVWTQGGPR-VVTGSAD 518

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            A  ++ V + S     L +   +  S +++PD ++ V     +G  +++          
Sbjct: 519 GAAHVWDV-ITSGELVTLRDDAAMVRSYAWNPDGTR-VLAGFDDGVVRVW--DEVSGKVV 574

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                      D  WSP G  +      G    + +      +   L          + P
Sbjct: 575 LSLAGHRFGVTDAQWSPDGTRVLTGSEDGT---VRLWDAATGEMTGLFL-------CFLP 624

Query: 400 SG 401
            G
Sbjct: 625 DG 626



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 51/152 (33%), Gaps = 19/152 (12%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             VV+G    +  V D   +           ++    ++P+  +V        D   V +
Sbjct: 510 PRVVTGSADGAAHVWDVITSGELVTLRDDAAMVRSYAWNPDGTRV----LAGFDDGVVRV 565

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +    +   R  +   ++S +G R L +  +D  + ++  D  +     L    
Sbjct: 566 WDEVSGKVVLSLAGHRFGVTDAQWSPDGTRVL-TGSEDGTVRLW--DAATGEMTGL---- 618

Query: 302 FINISASYSPDSSQIVFE----SDREGKEQLY 329
                  + PD    + +    S R G  +++
Sbjct: 619 ----FLCFLPDGGVAILDAPSLSLRSGPGEVW 646


>gi|313204200|ref|YP_004042857.1| wd40-like beta propeller containing protein [Paludibacter
           propionicigenes WB4]
 gi|312443516|gb|ADQ79872.1| WD40-like beta Propeller containing protein [Paludibacter
           propionicigenes WB4]
          Length = 694

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 84/267 (31%), Gaps = 58/267 (21%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------- 231
            S      L  M  DG+  + +T  +D I      SP++ K+ +                
Sbjct: 119 SSETGSMQLWTMKADGSERKQITDVKDGINDF-ALSPDETKLLFVADVKYGESTVDKYPD 177

Query: 232 ------------------------------DDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
                                         D ++     ++D       +        I 
Sbjct: 178 LPKSSGIIVTDLMYKHWDEWTKTVPHPFVADIKEGKIANIIDILNGEPYESPMKPFGGIE 237

Query: 262 APRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTL-FINISASYSPD 312
              +S +GK    + +K            DIY   L +  TE  T  +   + + ++SPD
Sbjct: 238 QLAWSPDGKTVAYTCRKKTGKEYALSTNSDIYFYTLSTGKTENKTQGMMGYDQNPTFSPD 297

Query: 313 SSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
              + +ES +R+G    K +L+VM     ++  +S + + +    +W+P    I F    
Sbjct: 298 GKWLAWESMERDGYEADKNRLFVMNLQTGEKTDLSANFDQNSGSLIWTPDSKSIYFVSCW 357

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQA 394
                I        +   + +  +  +
Sbjct: 358 HAVTQIYRADIASKKIVQITKGDHDYS 384



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 93/263 (35%), Gaps = 68/263 (25%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTL 301
             P+ + +F   +   + S +  + L SV            +++ ++   +  +++T T 
Sbjct: 42  MTPEVLWSF-GRVGGVQISPDKTKVLYSVSYYSITENKGNSELFVMNTDGSDKKQITKTA 100

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +A +  D   I F S   G  QL+ M+++GS++K+I+  K+    D   SP    +
Sbjct: 101 TREAAAKWMKDGQHIAFLSSETGSMQLWTMKADGSERKQITDVKDG-INDFALSPDETKL 159

Query: 362 AFT---------------------------------KFSGEKFAIGVMKKDGSQERLLVE 388
            F                                  +++       V      +   +++
Sbjct: 160 LFVADVKYGESTVDKYPDLPKSSGIIVTDLMYKHWDEWTKTVPHPFVADIKEGKIANIID 219

Query: 389 ---DSNLQAP----------TWSPSGRSLIFS-RKKDGD-----TGSKLYSIDL-NGRNE 428
                  ++P           WSP G+++ ++ RKK G      T S +Y   L  G+ E
Sbjct: 220 ILNGEPYESPMKPFGGIEQLAWSPDGKTVAYTCRKKTGKEYALSTNSDIYFYTLSTGKTE 279

Query: 429 TLINT-------PAYASDPQWVG 444
                       P ++ D +W+ 
Sbjct: 280 NKTQGMMGYDQNPTFSPDGKWLA 302



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 42/323 (13%), Positives = 108/323 (33%), Gaps = 71/323 (21%)

Query: 174 NSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +++L+     S+      + L VM+ DG++ + +T +  +     ++  + Q +A+ + 
Sbjct: 62  KTKVLYSVSYYSITENKGNSELFVMNTDGSDKKQITKTATREAAA-KWMKDGQHIAFLSS 120

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-------VQKDEAMDI 284
           +    ++++ M        K+I + +  I     S +  + L            D+  D+
Sbjct: 121 ETGS-MQLWTMKAD-GSERKQITDVKDGINDFALSPDETKLLFVADVKYGESTVDKYPDL 178

Query: 285 --------------------------YSVDLQSNATERLTNTLFINISA----------- 307
                                     +  D++      + + L  N              
Sbjct: 179 PKSSGIIVTDLMYKHWDEWTKTVPHPFVADIKEGKIANIIDIL--NGEPYESPMKPFGGI 236

Query: 308 ---SYSPDSSQIVFE-SDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
              ++SPD   + +    + G          +Y    +    +  +Q       +P +SP
Sbjct: 237 EQLAWSPDGKTVAYTCRKKTGKEYALSTNSDIYFYTLSTGKTENKTQGMMGYDQNPTFSP 296

Query: 357 QGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRK 409
            G  +A+     + +      + VM     ++  L  + +  + +  W+P  +S+ F   
Sbjct: 297 DGKWLAWESMERDGYEADKNRLFVMNLQTGEKTDLSANFDQNSGSLIWTPDSKSIYFVSC 356

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
                 +++Y  D+  +    I 
Sbjct: 357 --WHAVTQIYRADIASKKIVQIT 377



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 104/291 (35%), Gaps = 67/291 (23%)

Query: 219 FSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            SP++ KV Y+       +++    +++M+T      K+I    +   A ++  +G+   
Sbjct: 58  ISPDKTKVLYSVSYYSITENKGNSELFVMNTD-GSDKKQITKTATREAAAKWMKDGQHIA 116

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESD----------- 321
               +  +M ++++    +  +++T+    IN  A  SPD ++++F +D           
Sbjct: 117 FLSSETGSMQLWTMKADGSERKQITDVKDGINDFA-LSPDETKLLFVADVKYGESTVDKY 175

Query: 322 -----REG-----------------KEQLYVMQSNGSDQKRISQDKEASYFDP------- 352
                  G                     +V          I        ++        
Sbjct: 176 PDLPKSSGIIVTDLMYKHWDEWTKTVPHPFVADIKEGKIANIIDILNGEPYESPMKPFGG 235

Query: 353 ----VWSPQGDLIAFT--KFSGEKF------AIGVMKKDGSQERLLVED--SNLQAPTWS 398
                WSP G  +A+T  K +G+++       I        +     +      Q PT+S
Sbjct: 236 IEQLAWSPDGKTVAYTCRKKTGKEYALSTNSDIYFYTLSTGKTENKTQGMMGYDQNPTFS 295

Query: 399 PSGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLINTPAYASDPQ--WVG 444
           P G+ L + S ++DG     ++L+ ++L    +T ++     +     W  
Sbjct: 296 PDGKWLAWESMERDGYEADKNRLFVMNLQTGEKTDLSANFDQNSGSLIWTP 346


>gi|119773893|ref|YP_926633.1| peptidase [Shewanella amazonensis SB2B]
 gi|119766393|gb|ABL98963.1| peptidase, putative [Shewanella amazonensis SB2B]
          Length = 688

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 60/324 (18%), Positives = 106/324 (32%), Gaps = 66/324 (20%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DIL 237
                V        L + DRDG   R +T        EP FSP+   +A+ +  D+ D  
Sbjct: 66  VTRFDVKEDKGYTRLWLFDRDGKKQRPITAEGLG-ASEPVFSPDSSTLAFVSKRDKDDAG 124

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----------------------- 274
           ++YL+        +R+    + +   ++   GK                           
Sbjct: 125 QIYLLPMTGPGEAQRLTEVPTGVYGIKW--VGKHLYFIANVWPQKSWDEMAEQIKADKDK 182

Query: 275 -----------------SVQKDEAMDIYSVDLQSNATERLTNTLFIN------ISASYSP 311
                             + +D    ++ +     A E +T  L          SA Y  
Sbjct: 183 KLSARQWNALPYSQFDHWLDEDRQAHVFRIAASGGAVEAITQPLGRELPRSSQSSADYDI 242

Query: 312 DS--SQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           D+    I F S+    +      L++ +  G+    ++ D +A    P +SP GD +AF+
Sbjct: 243 DANEQYIAFTSNGWDNQVDPNIDLFLARIGGNQADNLTPDNKAPDDSPSFSPDGDTLAFS 302

Query: 365 KFSGEKF-----AIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSK 417
           +   + F      + +   D  + + L +  +  L +  WS  G+SL      D     +
Sbjct: 303 RQHIQGFYADTARLMLYDMDSKKLQSLTDGWDRSLGSFVWSKDGKSL--FSNIDDAATQR 360

Query: 418 LYSIDLNGRNETLINTPAYASDPQ 441
           LY ID        I        P 
Sbjct: 361 LYQIDAKTGKPRAITKATSFGAPA 384



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 75/216 (34%), Gaps = 17/216 (7%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNG--KRALISV-----QKDEAM 282
               + R+      ++   + +G    RS   +  +  +   +    +      Q D  +
Sbjct: 205 RQAHVFRIAASGGAVEAITQPLGRELPRSSQSSADYDIDANEQYIAFTSNGWDNQVDPNI 264

Query: 283 DIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGS 336
           D++   +  N  + LT +    + S S+SPD   + F             +L +   +  
Sbjct: 265 DLFLARIGGNQADNLTPDNKAPDDSPSFSPDGDTLAFSRQHIQGFYADTARLMLYDMDSK 324

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             + ++   + S    VWS  G  +           +  +     + R + + ++  AP 
Sbjct: 325 KLQSLTDGWDRSLGSFVWSKDGKSLFSNIDDAATQRLYQIDAKTGKPRAITKATSFGAPA 384

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +   +S + +        S+L ++D+     T ++
Sbjct: 385 VA--DKSTLVATNDSFLYPSRLVTVDVKSGKTTRLD 418



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 91/288 (31%), Gaps = 69/288 (23%)

Query: 217 PRFSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  SPN Q +      +   +D+   R++L D R  +  + I         P FS +   
Sbjct: 53  PVVSPNGQYIIAPVTRFDVKEDKGYTRLWLFD-RDGKKQRPITAEGLGASEPVFSPDSST 111

Query: 272 ALISVQK--DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-------- 320
                ++  D+A  IY + +      +RLT          +      + F +        
Sbjct: 112 LAFVSKRDKDDAGQIYLLPMTGPGEAQRLTEVPTGVYGIKWV--GKHLYFIANVWPQKSW 169

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQ----- 343
                                           D + +  ++ + ++G   + I+Q     
Sbjct: 170 DEMAEQIKADKDKKLSARQWNALPYSQFDHWLDEDRQAHVFRIAASGGAVEAITQPLGRE 229

Query: 344 --DKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSN--LQA 394
                 S  D         IAFT             + + +  G+Q   L  D+     +
Sbjct: 230 LPRSSQSSADYDIDANEQYIAFTSNGWDNQVDPNIDLFLARIGGNQADNLTPDNKAPDDS 289

Query: 395 PTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLINTPAYASD 439
           P++SP G +L FSR+         ++L   D++ +    + T  +   
Sbjct: 290 PSFSPDGDTLAFSRQHIQGFYADTARLMLYDMDSKKLQSL-TDGWDRS 336



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 42/100 (42%), Gaps = 9/100 (9%)

Query: 260 ILAPRFSSNGKRAL-----ISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           + +P  S NG+  +       V++D     ++  D        +T          +SPDS
Sbjct: 50  VGSPVVSPNGQYIIAPVTRFDVKEDKGYTRLWLFDRDGKKQRPITAEGLGASEPVFSPDS 109

Query: 314 SQIVFESDREGKE--QLYVMQSNG-SDQKRISQDKEASYF 350
           S + F S R+  +  Q+Y++   G  + +R+++     Y 
Sbjct: 110 STLAFVSKRDKDDAGQIYLLPMTGPGEAQRLTEVPTGVYG 149



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 9/104 (8%)

Query: 350 FDPVWSPQGDLIA-----FTKFSGEKF-AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGR 402
             PV SP G  I      F     + +  + +  +DG ++R +  +      P +SP   
Sbjct: 51  GSPVVSPNGQYIIAPVTRFDVKEDKGYTRLWLFDRDGKKQRPITAEGLGASEPVFSPDSS 110

Query: 403 SLIFSRKKDGDTGSKLYSIDLN--GRNETLINTPAYASDPQWVG 444
           +L F  K+D D   ++Y + +   G  + L   P      +WVG
Sbjct: 111 TLAFVSKRDKDDAGQIYLLPMTGPGEAQRLTEVPTGVYGIKWVG 154



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 51/155 (32%), Gaps = 7/155 (4%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL----RVYLMDTRID 247
            L +    G     LTP        P FSP+   +A++    +       R+ L D    
Sbjct: 265 DLFLARIGGNQADNLTPDNKAPDDSPSFSPDGDTLAFSRQHIQGFYADTARLMLYDMDSK 324

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +       +   + +  +S +GK    ++       +Y +D ++     +T        A
Sbjct: 325 KLQSLTDGWDRSLGSFVWSKDGKSLFSNIDDAATQRLYQIDAKTGKPRAITKATSFGAPA 384

Query: 308 SYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRI 341
               D S +V  +D      +L  +        R+
Sbjct: 385 V--ADKSTLVATNDSFLYPSRLVTVDVKSGKTTRL 417


>gi|145552033|ref|XP_001461693.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124429528|emb|CAK94320.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1478

 Score = 91.6 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 61/346 (17%), Positives = 124/346 (35%), Gaps = 42/346 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQ---IIGKK---FFSSPA-SWRKIAHTISDDIY--- 163
            G  +  G +   +  RLWDV   +Q    +G +   +    +   + +A   +D+     
Sbjct: 798  GTTLASGSNDKTI--RLWDVNTGQQKSIFVGHQNSVYSVCFSHDGKLLASGSADNSIRLW 855

Query: 164  -----QSITGEKGDFNSRILFVSESVV----SGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                 Q      G  NS       S      SG    S+ + + D              +
Sbjct: 856  DINTKQQTAIFVGHSNSVYSVCFSSDSKALASGSADKSIRLWEVDTRQQTAKFDGHSNSV 915

Query: 215  FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            +   FSP+ + +A  + D      + + +    +   +     + +L+  FS +G   L 
Sbjct: 916  YSVCFSPDSKVLASGSADK----SIRIWEVDTRQQTAKFDGHTNYVLSICFSPDGT-ILA 970

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            S   D+++ ++  D +     +        +S  +SPD + +   SD    + +++    
Sbjct: 971  SCSNDKSIRLW--DQKGQKITKFDGHTSYVLSICFSPDGTTLASGSD---DKSIHLWDIK 1025

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNL 392
               QK    +  ++ F   +SP G  +A          I +      Q +  L    SN+
Sbjct: 1026 TGKQKAKLDEHTSTVFSISFSPDGTQLASCSNDKS---ICLWDCITGQLQTKLTGHTSNI 1082

Query: 393  QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             +  +SP G +L+       D   +L+SI     N+ ++    + S
Sbjct: 1083 HSVCFSPYGTTLV---SGSEDQSVRLWSIQ---TNQQILKMDGHNS 1122



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 110/308 (35%), Gaps = 45/308 (14%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     RLW+V  R+Q           + +   H  S+ +Y          +S++L 
Sbjct: 886  ASGSADKSIRLWEVDTRQQ-----------TAKFDGH--SNSVYSVCFSP----DSKVL- 927

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                  SG    S+ + + D              +    FSP+   +A  + D    L  
Sbjct: 928  -----ASGSADKSIRIWEVDTRQQTAKFDGHTNYVLSICFSPDGTILASCSNDKSIRL-- 980

Query: 240  YLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
                   D+  ++I  F      +L+  FS +G     S   D+++ ++  D+++   + 
Sbjct: 981  ------WDQKGQKITKFDGHTSYVLSICFSPDGTTLA-SGSDDKSIHLW--DIKTGKQKA 1031

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            +L        S S+SPD +Q+   S+    + + +        +       ++     +S
Sbjct: 1032 KLDEHTSTVFSISFSPDGTQLASCSN---DKSICLWDCITGQLQTKLTGHTSNIHSVCFS 1088

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            P G  +  +    +   +  ++ +    ++   +S + +  +SP G +L        D  
Sbjct: 1089 PYGTTLV-SGSEDQSVRLWSIQTNQQILKMDGHNSAVYSVCFSPDGATLASGSD---DNS 1144

Query: 416  SKLYSIDL 423
             +L+ ++ 
Sbjct: 1145 IRLWDVNT 1152



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 91/246 (36%), Gaps = 15/246 (6%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                S+ + D+ G  I          +    FSP+   +A  + D      ++L D +  
Sbjct: 973  SNDKSIRLWDQKGQKI-TKFDGHTSYVLSICFSPDGTTLASGSDDK----SIHLWDIKTG 1027

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            +   ++    S + +  FS +G +   S   D+++ ++   +      +LT       S 
Sbjct: 1028 KQKAKLDEHTSTVFSISFSPDGTQLA-SCSNDKSICLWDC-ITGQLQTKLTGHTSNIHSV 1085

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +SP  + +V  S+    + + +     + Q        ++ +   +SP G  +A +   
Sbjct: 1086 CFSPYGTTLVSGSE---DQSVRLWSIQTNQQILKMDGHNSAVYSVCFSPDGATLA-SGSD 1141

Query: 368  GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                 +  +    S+  L    S + +  +SP+G  L        D   +L+++   G  
Sbjct: 1142 DNSIRLWDVNTGQSKFNLHGHTSGVLSVCFSPNGSLLA---SGGNDNSVRLWNVK-TGEQ 1197

Query: 428  ETLINT 433
            +  +N 
Sbjct: 1198 QKKLNG 1203



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 56/334 (16%), Positives = 117/334 (35%), Gaps = 36/334 (10%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD------- 172
                     R+W+V  R+Q    KF         I  +    I  S + +K         
Sbjct: 928  ASGSADKSIRIWEVDTRQQTA--KFDGHTNYVLSICFSPDGTILASCSNDKSIRLWDQKG 985

Query: 173  -----FNSRILFV--------SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
                 F+    +V          ++ SG    S+ + D      +         +F   F
Sbjct: 986  QKITKFDGHTSYVLSICFSPDGTTLASGSDDKSIHLWDIKTGKQKAKLDEHTSTVFSISF 1045

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+  ++A  + D      + L D    +   ++    S I +  FS  G   + S  +D
Sbjct: 1046 SPDGTQLASCSNDK----SICLWDCITGQLQTKLTGHTSNIHSVCFSPYGTTLV-SGSED 1100

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            +++ ++S+       + +        S  +SPD + +   SD      + +   N    K
Sbjct: 1101 QSVRLWSIQTNQQILK-MDGHNSAVYSVCFSPDGATLASGSD---DNSIRLWDVNTGQSK 1156

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                   +      +SP G L+A +  +     +  +K    Q++L    S +Q+  +S 
Sbjct: 1157 FNLHGHTSGVLSVCFSPNGSLLA-SGGNDNSVRLWNVKTGEQQKKLNGHTSYVQSVCFSS 1215

Query: 400  SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
               +L        D   +L++++  G+ + +++ 
Sbjct: 1216 DSTTLASGSY---DNSIRLWNVN-TGQQQAILDG 1245



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/298 (16%), Positives = 100/298 (33%), Gaps = 42/298 (14%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              RLWDV   +                  H  +  +        G              S
Sbjct: 1144 SIRLWDVNTGQSKFNL-------------HGHTSGVLSVCFSPNGSLL----------AS 1180

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G   NS+ + +      +         +    FS +   +A  +YD+     + L +   
Sbjct: 1181 GGNDNSVRLWNVKTGEQQKKLNGHTSYVQSVCFSSDSTTLASGSYDN----SIRLWNVNT 1236

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINI 305
             +    +    S +    FS NG     S   D  + ++  D+++   ++ L +     +
Sbjct: 1237 GQQQAILDGHTSYVSQICFSPNGTLLA-SASYDNTIRLW--DIRTQYQKQKLFDHTSSVL 1293

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            +AS S D + +   SD      + V   N   Q+ I     +      +SP G L+A   
Sbjct: 1294 TASLSTDYTTLASGSD---NNSIRVQNVNTGYQQAILDGHASYVSQVCFSPNGTLLASAS 1350

Query: 366  FSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +      I +      Q++  ++   S + +  +S  G +L  S    GD   +++++
Sbjct: 1351 YDNT---IRLWDIQTGQQQTQLDGHTSTIYSVCFSFDGTTLASSS---GDLSIRIWNV 1402



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 103/320 (32%), Gaps = 47/320 (14%)

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                  RLW++K  +QI+               HT    +Y       G          
Sbjct: 721 GSYDKSIRLWNIKTGQQILKLD-----------GHT--STVYSVCFSCDG---------- 757

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             + SG    S+ + + +    +      + I+    FS +   +A  + D      + L
Sbjct: 758 -KLASGSEDQSVRLWNIETGYQQQKMDGHNSIVQSVCFSHDGTTLASGSNDK----TIRL 812

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +        ++ + +  FS +GK    S   D ++ ++  D+ +     +    
Sbjct: 813 WDVNTGQQKSIFVGHQNSVYSVCFSHDGKLLA-SGSADNSIRLW--DINTKQQTAIFVGH 869

Query: 302 FINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             ++ S  +S DS  +   S     + + + + +   Q         S +   +SP   +
Sbjct: 870 SNSVYSVCFSSDSKALASGS---ADKSIRLWEVDTRQQTAKFDGHSNSVYSVCFSPDSKV 926

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKL 418
           +A          I + + D  Q+    +       +  +SP G  L        D   +L
Sbjct: 927 LASGSADKS---IRIWEVDTRQQTAKFDGHTNYVLSICFSPDGTILA---SCSNDKSIRL 980

Query: 419 YSIDLNGRNETLINTPAYAS 438
           +    + + + +     + S
Sbjct: 981 W----DQKGQKITKFDGHTS 996



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 87/218 (39%), Gaps = 20/218 (9%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                +    FS +   +A+ +YD      + L + +  +   ++    S + +  FS +
Sbjct: 701 GHTSYILSICFSSDSTIIAFGSYDK----SIRLWNIKTGQQILKLDGHTSTVYSVCFSCD 756

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQ 327
           GK  L S  +D+++ ++  ++++   ++  +    I  S  +S D + +   S+    + 
Sbjct: 757 GK--LASGSEDQSVRLW--NIETGYQQQKMDGHNSIVQSVCFSHDGTTLASGSN---DKT 809

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +   N   QK I    + S +   +S  G L+A          I +   +  Q+  + 
Sbjct: 810 IRLWDVNTGQQKSIFVGHQNSVYSVCFSHDGKLLASGSADNS---IRLWDINTKQQTAIF 866

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               +++ +  +S   ++L        D   +L+ +D 
Sbjct: 867 VGHSNSVYSVCFSSDSKALA---SGSADKSIRLWEVDT 901



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 112/319 (35%), Gaps = 44/319 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++  G +   V  RLW+VK  +Q   KK     +  + +    S D            
Sbjct: 1175 GSLLASGGNDNSV--RLWNVKTGEQ--QKKLNGHTSYVQSVC--FSSD------------ 1216

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                   S ++ SG   NS+ + + +    + +       + +  FSPN   +A A+YD+
Sbjct: 1217 -------STTLASGSYDNSIRLWNVNTGQQQAILDGHTSYVSQICFSPNGTLLASASYDN 1269

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + L D R     +++ +  S +L    S++           +   I   ++ +  
Sbjct: 1270 ----TIRLWDIRTQYQKQKLFDHTSSVLTASLSTDYTTLA---SGSDNNSIRVQNVNTGY 1322

Query: 294  TERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             + + +     +S   +SP+ + +   S       + +       Q+       ++ +  
Sbjct: 1323 QQAILDGHASYVSQVCFSPNGTLLASASY---DNTIRLWDIQTGQQQTQLDGHTSTIYSV 1379

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKK 410
             +S  G  +A +       +I +      Q+  +L +    +    +S  G  L     +
Sbjct: 1380 CFSFDGTTLASSS---GDLSIRIWNVQTGQQKAKLNLNQDQVGQLCFSLDGTVLA---SR 1433

Query: 411  DGDTGSKLYSIDLNGRNET 429
              D    L+ +    + +T
Sbjct: 1434 LVDNSICLWDVRTASQIQT 1452


>gi|145523572|ref|XP_001447621.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415139|emb|CAK80224.1| unnamed protein product [Paramecium tetraurelia]
          Length = 790

 Score = 91.6 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 115/317 (36%), Gaps = 38/317 (11%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                  +    RLWDVK  K           +  + + HT    +Y       G     
Sbjct: 389 TTLATGSVDKSIRLWDVKTGK-----------SQAKLVGHT--STVYSVYFSPNG----- 430

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 S+ SG    ++C+ D      +         +    FSP+   +A+ +YD+   
Sbjct: 431 -----TSLASGSQDYTICLWDVKTGQQKAKLYGHKSCVQSVCFSPDGTILAFGSYDN--- 482

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L + +      ++    S + +  FS +G     S   D+++ ++  D+++   + 
Sbjct: 483 -SIRLWNVKTGLYKAKLYGHSSCVNSVYFSPDGTTIA-SGSDDKSVRLW--DIKTLQQKA 538

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L    +   S   SP+ + +   S   G   + +       QK       +      +S
Sbjct: 539 KLDGHSYSVKSVCISPNGTTLASGS---GDNSIRLWDVKTGQQKGKLDGHSSIVTSVCFS 595

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P G  +A +  + +   +  ++ +  + +L    +++++   SP+G +L        D  
Sbjct: 596 PDGITLA-SGSADKSINLWDVQTEQQKVKLDGHSNSVKSVCISPNGTTLASVSH---DNS 651

Query: 416 SKLYSIDLNGRNETLIN 432
            +L+ I    +   L++
Sbjct: 652 IRLWDIKTLQQKAKLVD 668



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 93/239 (38%), Gaps = 19/239 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   NS+C+ D     I+ L    ++ +    FSP  + V   +  D+    V++ +  
Sbjct: 68  SGSDDNSICLRDVKTGKIKCLVQ-LEKKVKSINFSPKTKGVTLVSCSDQ---IVHIWNLI 123

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
             +   +I     ++    FS +      +  +D+++ ++  D+++   + +L       
Sbjct: 124 TGKQISKIIVNFQVVNTVIFSPDDTTLA-TGSEDKSISLW--DVKTRQQKAKLGGHSNRI 180

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  +SPD + +   S       + +       QK      ++      +SP G L+A  
Sbjct: 181 TSVCFSPDGTTLASGSS---DNSIRLWDVKTEKQKAQLDGHKSQVTSVSFSPDGTLLASG 237

Query: 365 KFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +    ++I +      Q   +L      +Q   +SP G++L        DT  +L+ +
Sbjct: 238 SYD---YSIRIWDVQTEQQKVQLYGHTGYVQTVCFSPDGKTLA---SGSCDTTIRLWDV 290



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/330 (12%), Positives = 104/330 (31%), Gaps = 61/330 (18%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    R+WDV+  +Q             +   HT    +        G        
Sbjct: 235 ASGSYDYSIRIWDVQTEQQ-----------KVQLYGHT--GYVQTVCFSPDG-------- 273

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-------------PNQQKV 226
             +++ SG    ++ + D      +         +    FS              +   +
Sbjct: 274 --KTLASGSCDTTIRLWDVKQGQQKGKLDGHSNYVTSVCFSLTVLYYHLVVMINLSVYGI 331

Query: 227 AYATYDDEDILRVY--------------LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            Y      +++ +               L D +  +   ++      +++  FS +G   
Sbjct: 332 LYLDNKKGNLMGIITQFLHSVFLLMSICLWDVKTSQLKIKLYGHTYSVMSICFSLDGTTL 391

Query: 273 LISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +   D+++ ++  D+++  ++ +L        S  +SP+ + +   S       + + 
Sbjct: 392 A-TGSVDKSIRLW--DVKTGKSQAKLVGHTSTVYSVYFSPNGTSLASGSQ---DYTICLW 445

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                 QK      ++      +SP G ++AF  +      +  +K    + +L    S 
Sbjct: 446 DVKTGQQKAKLYGHKSCVQSVCFSPDGTILAFGSYDNS-IRLWNVKTGLYKAKLYGHSSC 504

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +  +SP G ++        D   +L+ I
Sbjct: 505 VNSVYFSPDGTTIASGSD---DKSVRLWDI 531



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 61/174 (35%), Gaps = 11/174 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ +G    S+ + D      +         +    FSP+   +A  + D+     + L 
Sbjct: 149 TLATGSEDKSISLWDVKTRQQKAKLGGHSNRITSVCFSPDGTTLASGSSDN----SIRLW 204

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTL 301
           D + ++   ++   +S + +  FS +G     S   D ++ I+  D+Q+   + +L    
Sbjct: 205 DVKTEKQKAQLDGHKSQVTSVSFSPDGTLLA-SGSYDYSIRIW--DVQTEQQKVQLYGHT 261

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
               +  +SPD   +   S       + +       QK              +S
Sbjct: 262 GYVQTVCFSPDGKTLASGSC---DTTIRLWDVKQGQQKGKLDGHSNYVTSVCFS 312


>gi|281410799|gb|ADA68812.1| HET-R [Podospora anserina]
          Length = 588

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 105/325 (32%), Gaps = 36/325 (11%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQII------GKKFFSS-PASWRKIAHTISDDIYQSITGE 169
            +     +    ++WD    + +       G  +  +  A  +++A    DD  +     
Sbjct: 186 QRLASGAVDDTVKIWDPASGQCLQTLEGHNGSVYSVAFSADGQRLASGAGDDTVKIWDPA 245

Query: 170 KG----------DFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            G             S + F +  + + SG +  ++ + D                +   
Sbjct: 246 SGQCLQTLEGHRGSVSSVAFSADGQRLASGAVDRTVKIWDPASGQCLQTLEGHTGSVSSV 305

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q+ A    DD     V + D    +  + +   R  + +  FS +G+R   S  
Sbjct: 306 AFSPDGQRFASGVVDD----TVKIWDPASGQCLQTLEGHRGSVSSVAFSPDGQRFA-SGA 360

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + I+         + L        S ++S D  +        G + + +       
Sbjct: 361 GDRTIKIWD-PASGQCLQTLEGHRGWVYSVAFSADGQRFA---SGAGDDTVKIWDPASGQ 416

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAP 395
             +  +    S     +SP G    F   +G++  + +      Q    +E    ++ + 
Sbjct: 417 CLQTLEGHRGSVSSVAFSPDGQR--FASGAGDR-TVKIWDPASGQCLQTLEGHRGSVSSV 473

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYS 420
            +SP G+         GD   K++ 
Sbjct: 474 AFSPDGQRFA---SGAGDRTIKIWD 495



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 94/310 (30%), Gaps = 33/310 (10%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGK--------KFFSSPASWRKIAHTISDDI------ 162
            +     +    ++WD    + +               SP   R  +  + D +      
Sbjct: 270 QRLASGAVDRTVKIWDPASGQCLQTLEGHTGSVSSVAFSPDGQRFASGVVDDTVKIWDPA 329

Query: 163 ----YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                Q++ G +G  +S       +   SG    ++ + D                ++  
Sbjct: 330 SGQCLQTLEGHRGSVSSVAFSPDGQRFASGAGDRTIKIWDPASGQCLQTLEGHRGWVYSV 389

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + Q+ A    DD     V + D    +  + +   R  + +  FS +G+R   S  
Sbjct: 390 AFSADGQRFASGAGDD----TVKIWDPASGQCLQTLEGHRGSVSSVAFSPDGQRFA-SGA 444

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + I+         + L        S ++SPD  +        G   + +       
Sbjct: 445 GDRTVKIWD-PASGQCLQTLEGHRGSVSSVAFSPDGQRFA---SGAGDRTIKIWDPASGQ 500

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAP 395
             +  +    S     +SP G  +A          + +      Q    +E    ++ + 
Sbjct: 501 CLQTLEGHTGSVSSVAFSPDGQRLASGAVDDT---VKIWDPASGQCLQTLEGHNGSVSSV 557

Query: 396 TWSPSGRSLI 405
            +S  G+ L 
Sbjct: 558 AFSADGQRLA 567



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/313 (14%), Positives = 97/313 (30%), Gaps = 35/313 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQII------GKKFFS--SPASWRKIAHTISDDI--- 162
           G+ +  G     V  ++WD    +         G  +    SP   R  +  + D +   
Sbjct: 17  GQRLASGAGDRTV--KIWDPASGQCFQTLEGHNGSVYSVAFSPDGQRLASGAVDDTVKIW 74

Query: 163 -------YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                   Q++ G  G   S       + + SG   +++ + D                +
Sbjct: 75  DPASGQCLQTLEGHNGSVYSVAFSADGQRLASGAGDDTVKIWDPASGQCLQTLEGHRGSV 134

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               FS + Q++A    D      V + D    +  + +      + +  FS +G+R   
Sbjct: 135 SSVAFSADGQRLASGAVDR----TVKIWDPASGQCLQTLEGHNGSVYSVAFSPDGQRLA- 189

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S   D+ + I+         + L        S ++S D  ++       G + + +    
Sbjct: 190 SGAVDDTVKIWD-PASGQCLQTLEGHNGSVYSVAFSADGQRLA---SGAGDDTVKIWDPA 245

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNL 392
                +  +    S     +S  G  +A          + +      Q    +E    ++
Sbjct: 246 SGQCLQTLEGHRGSVSSVAFSADGQRLASGAVDRT---VKIWDPASGQCLQTLEGHTGSV 302

Query: 393 QAPTWSPSGRSLI 405
            +  +SP G+   
Sbjct: 303 SSVAFSPDGQRFA 315



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 66/201 (32%), Gaps = 14/201 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  ++   FS + Q++A    D      V + D    +  + +      + +  FS
Sbjct: 1   LEGHNGSVYSVAFSADGQRLASGAGDR----TVKIWDPASGQCFQTLEGHNGSVYSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+R   S   D+ + I+         + L        S ++S D  ++       G +
Sbjct: 57  PDGQRLA-SGAVDDTVKIWD-PASGQCLQTLEGHNGSVYSVAFSADGQRLA---SGAGDD 111

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +         +  +    S     +S  G  +A          + +      Q    
Sbjct: 112 TVKIWDPASGQCLQTLEGHRGSVSSVAFSADGQRLASGAVDRT---VKIWDPASGQCLQT 168

Query: 387 VED--SNLQAPTWSPSGRSLI 405
           +E    ++ +  +SP G+ L 
Sbjct: 169 LEGHNGSVYSVAFSPDGQRLA 189


>gi|254409683|ref|ZP_05023464.1| hypothetical protein MC7420_7316 [Microcoleus chthonoplastes PCC
           7420]
 gi|196183680|gb|EDX78663.1| hypothetical protein MC7420_7316 [Microcoleus chthonoplastes PCC
           7420]
          Length = 914

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 90/247 (36%), Gaps = 24/247 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              R         +++  +SP+ + +A A+ D    ++++  D       + +      +
Sbjct: 291 GRERNQLEGHTDRVWDVSYSPDGEWIATASND--QTVKLWRPD---GTLVRTLTGHTQQV 345

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +  FS +G+    S   D  ++++  + +    + +        S  +SPD   +   S
Sbjct: 346 RSVSFSPDGQTLA-SGSFDGTVNLW--NREGTLIKTIAAHDDAVNSVKFSPDGKLLATAS 402

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                +Q   +              +   +   +SP G+ +A   + G    + +   +G
Sbjct: 403 ----NDQTVKLWQPDGTLVGTLAGHQGQVYGVSFSPDGETLATASWDGT---VKLWTLEG 455

Query: 381 SQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-----GRNETLINTP 434
            +   L   ++ +   ++SP G+ +        D   KL+S D         +E LIN  
Sbjct: 456 EERLTLTGHEAGVSGVSFSPDGQRIA---SSGADNTIKLWSQDGTLITTLTGHENLINGV 512

Query: 435 AYASDPQ 441
            ++ D Q
Sbjct: 513 VWSPDGQ 519



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 101/306 (33%), Gaps = 47/306 (15%)

Query: 135 DRKQIIGKKFFSSPASWRK--------IAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           D + +    F  +   W +         AH   D +        G          + + +
Sbjct: 353 DGQTLASGSFDGTVNLWNREGTLIKTIAAH--DDAVNSVKFSPDG----------KLLAT 400

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                ++ +   DG  +          ++   FSP+ + +A A++D      V L     
Sbjct: 401 ASNDQTVKLWQPDGT-LVGTLAGHQGQVYGVSFSPDGETLATASWDG----TVKLWTLEG 455

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +     +    + +    FS +G+R   S   D  + ++S D        LT    +   
Sbjct: 456 EERLT-LTGHEAGVSGVSFSPDGQRIA-SSGADNTIKLWSQD--GTLITTLTGHENLING 511

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSN---GSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +SPD   +   SD +   +L+ +      G+  ++     + + +   +SP G  +A 
Sbjct: 512 VVWSPDGQTLASSSD-DQTVKLWRLDGETRHGASLQQTLTGHQGAVYGTSFSPDGQTLAS 570

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVED-----SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                      +       ER LV+       ++ +  +SP G  L  +     D   KL
Sbjct: 571 ASLDKTVKLWQL------GERQLVDTLQGHRDSVNSVRFSPQGNYLASASS---DKTVKL 621

Query: 419 YSIDLN 424
           +  D  
Sbjct: 622 WQSDGT 627



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 105/265 (39%), Gaps = 30/265 (11%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E G          + + S    N++ +  +DG  +       + ++    +SP+ Q +A
Sbjct: 464 HEAGVSGVSFSPDGQRIASSGADNTIKLWSQDGT-LITTLTGHENLINGVVWSPDGQTLA 522

Query: 228 YATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            ++ D    L     +TR   + ++ +   +  +    FS +G+    S   D+ + ++ 
Sbjct: 523 SSSDDQTVKLWRLDGETRHGASLQQTLTGHQGAVYGTSFSPDGQTLA-SASLDKTVKLWQ 581

Query: 287 VDLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +        +L +          S  +SP  + +   S     + + + QS+G++   + 
Sbjct: 582 L-----GERQLVDTLQGHRDSVNSVRFSPQGNYLASASS---DKTVKLWQSDGTELATLQ 633

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-------- 394
           ++++  Y D  +SP G+ I      G    + +  ++G   + L  + NL+         
Sbjct: 634 ENRDRVY-DVNFSPDGETIVTV---GNDKRVRLWNREGKLLKTLPGEDNLEDGHRDRINR 689

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLY 419
            ++SP G ++  + +   D   KL+
Sbjct: 690 VSFSPDGETIATASE---DATIKLW 711



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 73/213 (34%), Gaps = 20/213 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           GA+++         ++   FSP+ Q +A A+ D      V L      +    +   R  
Sbjct: 542 GASLQQTLTGHQGAVYGTSFSPDGQTLASASLDK----TVKLWQLGERQLVDTLQGHRDS 597

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + + RFS  G     S   D+ + ++  D        L          ++SPD   IV  
Sbjct: 598 VNSVRFSPQGNYLA-SASSDKTVKLWQSD--GTELATLQENRDRVYDVNFSPDGETIV-- 652

Query: 320 SDREGKEQLYVMQSNGS------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                 +++ +    G        +  +            +SP G+ IA          I
Sbjct: 653 -TVGNDKRVRLWNREGKLLKTLPGEDNLEDGHRDRINRVSFSPDGETIATASEDAT---I 708

Query: 374 GVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
            +  ++G   + L E  S +   ++SP G  + 
Sbjct: 709 KLWNRNGMLLKTLDEHRSGVNDISFSPDGEMIA 741



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 75/211 (35%), Gaps = 15/211 (7%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +++          R   ++      +    +S +G+    +   D+ + ++  D      
Sbjct: 279 NVITALQQTVSWGRERNQLEGHTDRVWDVSYSPDGEWIA-TASNDQTVKLWRPD--GTLV 335

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             LT       S S+SPD   +   S  +G   L+     G+  K I+   +A      +
Sbjct: 336 RTLTGHTQQVRSVSFSPDGQTLASGSF-DGTVNLW--NREGTLIKTIAAHDDA-VNSVKF 391

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGD 413
           SP G L+A          + + + DG+    L      +   ++SP G +L  +     D
Sbjct: 392 SPDGKLLATASNDQT---VKLWQPDGTLVGTLAGHQGQVYGVSFSPDGETLATASW---D 445

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              KL++++      TL    A  S   +  
Sbjct: 446 GTVKLWTLEGE-ERLTLTGHEAGVSGVSFSP 475



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 99/300 (33%), Gaps = 35/300 (11%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D + +       +   W+     + D +           + R       + S     ++ 
Sbjct: 564 DGQTLASASLDKTVKLWQLGERQLVDTLQ---GHRDSVNSVRFSPQGNYLASASSDKTVK 620

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +   DG  +  L  +RD++ ++  FSP+ + +        +  RV L +          G
Sbjct: 621 LWQSDGTELATLQENRDRV-YDVNFSPDGETIVTV----GNDKRVRLWNREGKLLKTLPG 675

Query: 255 ------NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                   R  I    FS +G+    +  +D  + ++  +      + L          S
Sbjct: 676 EDNLEDGHRDRINRVSFSPDGETIA-TASEDATIKLW--NRNGMLLKTLDEHRSGVNDIS 732

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   I   S     ++  +    G+      Q  + +     +SP G+ IA      
Sbjct: 733 FSPDGEMIASVS----SDKAVIWDKTGTVLSS-WQADDEAITAVTFSPDGETIATASEDK 787

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 ++K    +  LL   +    P     +SP G+++  S   DG    KL+  D  
Sbjct: 788 ------MVKLWDKEGVLLNTFAGHDNPVYAVAFSPDGQTIA-SGSLDGQ--IKLWQRDGT 838



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 97/283 (34%), Gaps = 44/283 (15%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT------PSRDQI 213
           D +Y       G          E++V+      + + +R+G  ++ L             
Sbjct: 637 DRVYDVNFSPDG----------ETIVTVGNDKRVRLWNREGKLLKTLPGEDNLEDGHRDR 686

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +    FSP+ + +A A+ D      + L + R     K +   RS +    FS +G+   
Sbjct: 687 INRVSFSPDGETIATASEDA----TIKLWN-RNGMLLKTLDEHRSGVNDISFSPDGEMIA 741

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYV 330
                   +              L++    +    + ++SPD   I   S+    +++  
Sbjct: 742 SVSSDKAVIW-------DKTGTVLSSWQADDEAITAVTFSPDGETIATASE----DKMVK 790

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-ED 389
           +              +   +   +SP G  IA     G    I + ++DG+    L    
Sbjct: 791 LWDKEGVLLNTFAGHDNPVYAVAFSPDGQTIASGSLDG---QIKLWQRDGTPIVTLKGHQ 847

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             ++  ++ P  ++L  +        + +   +L   N+T+++
Sbjct: 848 DEIRGLSFHPDKQTLASAS-----LDNSIILWNLEDVNQTVLD 885


>gi|145551917|ref|XP_001461635.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124429470|emb|CAK94262.1| unnamed protein product [Paramecium tetraurelia]
          Length = 848

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 60/363 (16%), Positives = 118/363 (32%), Gaps = 54/363 (14%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG------RV------IKEGKDRL 124
               +     +   I+N DS+ RF D+ SL  +V   G      +V              
Sbjct: 490 GRMLVSGSGQYDDFISNRDSMIRFWDFKSLKQEVNSVGHKGNVKQVCFSPDGTTLASGSS 549

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
                LWDVK  +Q+   +            H     +        G      L      
Sbjct: 550 DNSIHLWDVKTGQQMFKLE-----------GHGQC--VNSVCFSPDGI----TLASGGES 592

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                +N +C+ D       +     ++ +    FSP+   +A  +YD+     + L D 
Sbjct: 593 TYDSKENYICIWDVKTGQQMFKLEGHERYVNSVCFSPDGTTLASGSYDN----SIRLWDV 648

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFI 303
           +  +   ++      +++  FS  G     S   D ++ ++  D+++     +L      
Sbjct: 649 KTGQQKVKLDGHSEAVISVNFSPVGTTLA-SGSYDNSIRLW--DVKTGQQMFKLEGHENG 705

Query: 304 NISASYSPDSSQIV---FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             S  +SPD + +    F+S       + +       Q    +  E       +SP G  
Sbjct: 706 VNSVCFSPDGTTLASGGFDSS------IRLWDVKTGQQMFKLEGHERYVNSVCFSPDGTT 759

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKL 418
           +A   +      I +   +  Q+   +E       +  +S  G +L       GD   +L
Sbjct: 760 LASGSYDNS---IRLWDVNSGQQMFKLEGHEHCVNSVCFSSDGTTLA---SGSGDHSIRL 813

Query: 419 YSI 421
           + +
Sbjct: 814 WDV 816



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 81/211 (38%), Gaps = 22/211 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            NIRY+     +++    +SPN Q +   +        +YL +    +  +++    S +
Sbjct: 259 GNIRYVIEGEREVMSL-CYSPNCQILGACS-----GKFIYLWNLYTGKQKQKLTGHNSYV 312

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFE 319
            A  FSS+G +   SV  D  + I+ V ++     +     + +     +SPD++ I F 
Sbjct: 313 KAVSFSSDGLKLA-SVDVDNTLYIWDV-IKGKQIIQ-----YDDCYPVCFSPDAAMIAFA 365

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---FSGEKFAIGVM 376
                   +Y++     ++K I +          +SP G  +A       +G    + + 
Sbjct: 366 ---GLNYNIYLLDVETGEEKAIFKRHYTEILSICFSPDGTTLASGGGDIKTGSCSRVYLW 422

Query: 377 KKDGSQER--LLVEDSNLQAPTWSPSGRSLI 405
                Q +  L        +  +SP G +L 
Sbjct: 423 DLKTGQLKNELCYMKCRFTSVCFSPDGTTLA 453



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 96/292 (32%), Gaps = 51/292 (17%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             +WDV   KQII  ++               DD Y           + I F   +    
Sbjct: 333 LYIWDVIKGKQII--QY---------------DDCYPVCFSPD---AAMIAFAGLN---- 368

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--DILRVYLMDTR 245
               ++ ++D +    + +       +    FSP+   +A    D +     RVYL D +
Sbjct: 369 ---YNIYLLDVETGEEKAIFKRHYTEILSICFSPDGTTLASGGGDIKTGSCSRVYLWDLK 425

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
             +    +   +    +  FS +G     SV  +    I   ++++   E         I
Sbjct: 426 TGQLKNELCYMKCRFTSVCFSPDGTTLAASVINN----IIVWNVETGEEEYFLQCYHKEI 481

Query: 304 NISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           N+   +S D   +V        F S+R+    +         Q+  S   + +     +S
Sbjct: 482 NL-ICFSSDGRMLVSGSGQYDDFISNRD--SMIRFWDFKSLKQEVNSVGHKGNVKQVCFS 538

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
           P G  +A          I +      Q+  +L      + +  +SP G +L 
Sbjct: 539 PDGTTLASGSSDNS---IHLWDVKTGQQMFKLEGHGQCVNSVCFSPDGITLA 587



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 20/168 (11%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S NG     S  K     I   +L+      +       +S  YSP+   +   S   G
Sbjct: 236 YSPNGHYFASSSNKS----IILWNLRRGNIRYVIEGEREVMSLCYSPNCQILGACS---G 288

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           K  +Y+       QK+      +      +S  G  +A        +   V+K     ++
Sbjct: 289 KF-IYLWNLYTGKQKQKLTGHNSYVKAVSFSSDGLKLASVDVDNTLYIWDVIK----GKQ 343

Query: 385 LLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           ++    +   P  +SP    + F+          +Y +D+    E  I
Sbjct: 344 II--QYDDCYPVCFSPDAAMIAFA-----GLNYNIYLLDVETGEEKAI 384


>gi|110668209|ref|YP_658020.1| dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Haloquadratum
           walsbyi DSM 16790]
 gi|109625956|emb|CAJ52400.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Haloquadratum
           walsbyi DSM 16790]
          Length = 629

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 99/259 (38%), Gaps = 10/259 (3%)

Query: 188 IIKNSLCVMDRD-GANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTR 245
             +N L V++ + G   ++      +    P  ++ +   V +   D+    +  +    
Sbjct: 39  TGRNELHVLNVESGEVTQWSEGDVPRNARWPINWAADGDSVFF-HLDNNGNEQNDIYRIS 97

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            D   + +      +       +G   +I   +D  M++Y+ DL S  T ++T       
Sbjct: 98  QDGKAEAVVEMDGQVAINDIGEDGDTLIIGSSRDGQMNLYNHDLSSGETAKITEYERAAA 157

Query: 306 SASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLI 361
            A  SP+  QI +    SD    + +Y+  ++G+  + +      +   P  W P G+ +
Sbjct: 158 GAILSPECDQIAYATNESDNFDNQDIYIADTDGATTQNLDIGDTGAEASPADWGPDGERL 217

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYS 420
             +  S +   +GV   +  +      D   ++P  + P G+ ++  R ++ ++   +Y 
Sbjct: 218 LISDNSTDLGRLGVYDVNSEELTWFENDEFEESPKAFLPDGKRVLGYRSREAESVPIIY- 276

Query: 421 IDLNGRNETLINTPAYASD 439
            D      T  + P   + 
Sbjct: 277 -DSETGEATEFDLPGGVAS 294



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 84/223 (37%), Gaps = 17/223 (7%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAP-RFSSNG 269
             L  P  SP+  ++A+  YD      +++++       +   G+       P  ++++G
Sbjct: 18  PTLAHPTVSPDGDQIAFY-YDITGRNELHVLNVESGEVTQWSEGDVPRNARWPINWAADG 76

Query: 270 KRALISVQKDEA--MDIYSVDLQSNATERL-TNTL-FINISASYSPDSSQIVFESDREGK 325
                 +  +     DIY +     A   +  +    IN       D   ++  S R+G+
Sbjct: 77  DSVFFHLDNNGNEQNDIYRISQDGKAEAVVEMDGQVAIND---IGEDGDTLIIGSSRDGQ 133

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQ 382
             LY    +  +  +I+ + E +    + SP+ D IA+     + F    I +   DG+ 
Sbjct: 134 MNLYNHDLSSGETAKIT-EYERAAAGAILSPECDQIAYATNESDNFDNQDIYIADTDGAT 192

Query: 383 ERLL--VEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSID 422
            + L   +     +P  W P G  L+ S          +Y ++
Sbjct: 193 TQNLDIGDTGAEASPADWGPDGERLLISDNSTDLGRLGVYDVN 235



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 66/193 (34%), Gaps = 12/193 (6%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISA-SYSPDSSQIVF 318
            P  S +G +           +++ ++++S    + +            +++ D   + F
Sbjct: 22  HPTVSPDGDQIAFYYDITGRNELHVLNVESGEVTQWSEGDVPRNARWPINWAADGDSVFF 81

Query: 319 ESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             D  G EQ  +Y +  +G  +  +  D + +  D      GD +        +  +   
Sbjct: 82  HLDNNGNEQNDIYRISQDGKAEAVVEMDGQVAIND--IGEDGDTLIIGSSRDGQMNLYNH 139

Query: 377 KKDGSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSK-LYSIDLNGRNETLI--- 431
                +   + E     A    SP    + ++  +  +  ++ +Y  D +G     +   
Sbjct: 140 DLSSGETAKITEYERAAAGAILSPECDQIAYATNESDNFDNQDIYIADTDGATTQNLDIG 199

Query: 432 NTPAYASDPQWVG 444
           +T A AS   W  
Sbjct: 200 DTGAEASPADWGP 212



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 4/94 (4%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAP-TWSPSGRS 403
           +   P  SP GD IAF      +  + V+  +  +     E     N + P  W+  G S
Sbjct: 19  TLAHPTVSPDGDQIAFYYDITGRNELHVLNVESGEVTQWSEGDVPRNARWPINWAADGDS 78

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           + F    +G+  + +Y I  +G+ E ++      
Sbjct: 79  VFFHLDNNGNEQNDIYRISQDGKAEAVVEMDGQV 112



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 61/173 (35%), Gaps = 4/173 (2%)

Query: 220 SPNQQKVAYAT--YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISV 276
           SP   ++AYAT   D+ D   +Y+ DT                 +P  +  +G+R LIS 
Sbjct: 162 SPECDQIAYATNESDNFDNQDIYIADTDGATTQNLDIGDTGAEASPADWGPDGERLLISD 221

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              +   +   D+ S       N  F     ++ PD  +++    RE +    +  S   
Sbjct: 222 NSTDLGRLGVYDVNSEELTWFENDEFEESPKAFLPDGKRVLGYRSREAESVPIIYDSETG 281

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVE 388
           +          + F        + +  T  +  +   + +   +  + + LVE
Sbjct: 282 EATEFDLPGGVASFGTEAIVDKNRVVLTHTTPTQRPELLIYNIETHEHKTLVE 334


>gi|29345997|ref|NP_809500.1| prolyl oligopeptidase family protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29337891|gb|AAO75694.1| prolyl oligopeptidase family protein [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 699

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 51/320 (15%), Positives = 107/320 (33%), Gaps = 67/320 (20%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG++ R +T +  Q      +     K+A+ + D+       +
Sbjct: 74  YSVPENKSNREVFVMNADGSDNRQITRTPYQENEV-TWIKGGSKLAFLSNDNGSSQLYEM 132

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------------- 278
                 R  K++ N+   I     S +GK+ L   Q                        
Sbjct: 133 NPDGSGR--KQLTNYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTD 190

Query: 279 ----------DEAMDIYSVDLQSNATERLTN-------------TLFINISASYSPDSSQ 315
                       A   +  D   N    + +                I    +++  S +
Sbjct: 191 LMYKHWDEWVTTAPHPFVADFDGNGISNIVDILEGEPYESPMKPWGGIE-QLAWNTTSDK 249

Query: 316 IVFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + +                 +YV   N      I+++ +    +P +SP G  IA+    
Sbjct: 250 VAYTCRKKTGLEYAVSTNSDIYVYDLNTKKTDNITEENKGYDTNPQYSPDGKYIAWQSME 309

Query: 368 GEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            + +      + +M  +  ++R + +  +SN+ A  W    +++ F+    G+T  ++YS
Sbjct: 310 RDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFVWGNDAKTIYFTGVWHGET--QIYS 367

Query: 421 IDLNGRNETLINTPAYASDP 440
           +DL   +   I +  Y  + 
Sbjct: 368 LDLTNDSVKAITSGMYDYEG 387



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 91/280 (32%), Gaps = 67/280 (23%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISV------QKD 279
           T D     +V +  + I    KR+          I     S +GK+   +V      +  
Sbjct: 21  TKDAGKTDQVLIEKSDIKIEGKRMTPEALWAMGRIGGLAVSPDGKKIAYTVAYYSVPENK 80

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +++ ++   +   ++T T +     ++    S++ F S+  G  QLY M  +GS +K
Sbjct: 81  SNREVFVMNADGSDNRQITRTPYQENEVTWIKGGSKLAFLSNDNGSSQLYEMNPDGSGRK 140

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK----------------------------- 370
           +++ + +        SP G  + F      K                             
Sbjct: 141 QLT-NYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTDLMYKHWDEW 199

Query: 371 ----FAIGVMKKDGSQERLLVEDSNLQAPTWSPS--------------GRSLIFS-RKKD 411
                   V   DG+    +V D     P  SP                  + ++ RKK 
Sbjct: 200 VTTAPHPFVADFDGNGISNIV-DILEGEPYESPMKPWGGIEQLAWNTTSDKVAYTCRKKT 258

Query: 412 G-----DTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           G      T S +Y  DLN +    I      Y ++PQ+  
Sbjct: 259 GLEYAVSTNSDIYVYDLNTKKTDNITEENKGYDTNPQYSP 298



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 87/276 (31%), Gaps = 61/276 (22%)

Query: 218 RFSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+ +K+AY     +  +    R   +        ++I           +   G +  
Sbjct: 59  AVSPDGKKIAYTVAYYSVPENKSNREVFVMNADGSDNRQITRTPYQENEVTWIKGGSKLA 118

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-------- 325
                + +  +Y ++   +  ++LTN        S SPD  +++F S  + K        
Sbjct: 119 FLSNDNGSSQLYEMNPDGSGRKQLTNYDGDIEGYSISPDGKKLLFISQVKTKESTADKYP 178

Query: 326 -------------------------EQLYVMQSNGSDQKRISQDKEASYFDP-------- 352
                                       +V   +G+    I    E   ++         
Sbjct: 179 DLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVDILEGEPYESPMKPWGGI 238

Query: 353 ---VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSP 399
               W+   D +A+T                I V   +  +   + E+       P +SP
Sbjct: 239 EQLAWNTTSDKVAYTCRKKTGLEYAVSTNSDIYVYDLNTKKTDNITEENKGYDTNPQYSP 298

Query: 400 SGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLIN 432
            G+ + + S ++DG     ++L+ ++L    +  ++
Sbjct: 299 DGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVS 334



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 104/312 (33%), Gaps = 60/312 (19%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------D 232
            +    + L  M+ DG+  + LT     I      SP+ +K+ + +             D
Sbjct: 121 SNDNGSSQLYEMNPDGSGRKQLTNYDGDIEGY-SISPDGKKLLFISQVKTKESTADKYPD 179

Query: 233 DEDILRVYLMDTRIDRAPKRIG--------NFRSMILA----------------P----- 263
                 + + D       + +         +F    ++                P     
Sbjct: 180 LPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVDILEGEPYESPMKPWGGIE 239

Query: 264 --RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLFINISASYSPD 312
              +++   +   + +K            DIY  DL +  T+ +T      + +  YSPD
Sbjct: 240 QLAWNTTSDKVAYTCRKKTGLEYAVSTNSDIYVYDLNTKKTDNITEENKGYDTNPQYSPD 299

Query: 313 SSQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
              I ++S +R+G      +L++M     +++ +S+  E++    VW      I FT   
Sbjct: 300 GKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFVWGNDAKTIYFTGVW 359

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +  I  +       + +           +  G  LI +++     G ++Y++ L+G  
Sbjct: 360 HGETQIYSLDLTNDSVKAITSGMYDYEGV-ALFGDKLI-AKRHSMSMGDEIYAVALDGSA 417

Query: 428 ETLINTPAYASD 439
             L        D
Sbjct: 418 TQLTQENKEIYD 429


>gi|148654198|ref|YP_001274403.1| WD40 domain-containing protein [Roseiflexus sp. RS-1]
 gi|148566308|gb|ABQ88453.1| WD40 domain protein beta Propeller [Roseiflexus sp. RS-1]
          Length = 560

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 92/285 (32%), Gaps = 59/285 (20%)

Query: 211 DQILFEPRFSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--- 260
           +    +P  S + + VA+        + D  +   +++ D +     +            
Sbjct: 163 NLASSDPSISADGRYVAFESIASNLVSGDTNNTGDIFVHDRQTGATTRVSIGPGGTQANR 222

Query: 261 --LAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERL------TNTLFIN 304
             LAP  S++G+                +    I+  D Q+ AT R+      T    ++
Sbjct: 223 GSLAPSISADGRYVAFHSSATNLVSGVTNGTTHIFVHDRQTGATTRVSVASDGTEGNSVS 282

Query: 305 ISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRIS-----QDKEASYFD 351
           I  S S D   + F+S        D  G + ++V         R+S      +  +   D
Sbjct: 283 IKPSISADGRYVAFQSIATNLVSGDTNGTQDIFVHDRQTGQTTRVSVASDGTEGNSGSND 342

Query: 352 PVWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLL------VEDSNLQA-PT 396
           P  S  G  +AF   +             I +  +       +       E +N+ + P+
Sbjct: 343 PSISANGRYVAFQSQANNLVSGDTGFITDIFIHDRQTGVTTRVSIAFDGTEANNVSSAPS 402

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            S  GR + F         S L   D NG  +  ++     + P 
Sbjct: 403 ISADGRYIAFESN-----ASNLVDGDTNGTQDIFVHDREDNTAPT 442



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 56/354 (15%), Positives = 110/354 (31%), Gaps = 73/354 (20%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS-PASWRKIAHTISDDIYQSITGEKGD 172
           G V     + +RV        D  Q  G  F  S  A  R +A   +      ++G+   
Sbjct: 25  GSVRAAPGNTIRVSV----ASDGTQANGGSFTPSISADGRYVA--FASIAVNLVSGDTNG 78

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY- 231
                +   ++  +  +  +      +G              F+P  S + + VA+A+  
Sbjct: 79  VQDIFVHDRQTGQTTRVSVASGGAQANG------------PSFDPSISADGRYVAFASLA 126

Query: 232 ------DDEDILRVYLMDTRIDRAPKRIGNFRS-----MILAPRFSSNGKRALI------ 274
                 D  +   +++ D +  +  +                P  S++G+          
Sbjct: 127 TNLVSGDTNNEQDIFVHDRQTGQTTRVSVATGGGQANLASSDPSISADGRYVAFESIASN 186

Query: 275 --SVQKDEAMDIYSVDLQSNATERLTNTLF------INISASYSPDSSQIVFESDRE--- 323
             S   +   DI+  D Q+ AT R++           +++ S S D   + F S      
Sbjct: 187 LVSGDTNNTGDIFVHDRQTGATTRVSIGPGGTQANRGSLAPSISADGRYVAFHSSATNLV 246

Query: 324 -----GKEQLYVMQSNGSDQKRISQDKEASYFD-----PVWSPQGDLIAFTKF------- 366
                G   ++V         R+S   + +  +     P  S  G  +AF          
Sbjct: 247 SGVTNGTTHIFVHDRQTGATTRVSVASDGTEGNSVSIKPSISADGRYVAFQSIATNLVSG 306

Query: 367 -SGEKFAIGVMKKDGSQERLLV-------EDSNLQAPTWSPSGRSLIFSRKKDG 412
            +     I V  +   Q   +         +S    P+ S +GR + F  + + 
Sbjct: 307 DTNGTQDIFVHDRQTGQTTRVSVASDGTEGNSGSNDPSISANGRYVAFQSQANN 360



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 69/235 (29%), Gaps = 48/235 (20%)

Query: 254 GNFRSMILAPRFSSNGKRALI--------SVQKDEAMDIYSVDLQSNATERLT------N 299
                    P  S++G+            S   +   DI+  D Q+  T R++       
Sbjct: 44  TQANGGSFTPSISADGRYVAFASIAVNLVSGDTNGVQDIFVHDRQTGQTTRVSVASGGAQ 103

Query: 300 TLFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRI---SQDKEAS 348
               +   S S D   + F S        D   ++ ++V         R+   +   +A+
Sbjct: 104 ANGPSFDPSISADGRYVAFASLATNLVSGDTNNEQDIFVHDRQTGQTTRVSVATGGGQAN 163

Query: 349 Y--FDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLV-------EDSN 391
               DP  S  G  +AF           +     I V  +       +         +  
Sbjct: 164 LASSDPSISADGRYVAFESIASNLVSGDTNNTGDIFVHDRQTGATTRVSIGPGGTQANRG 223

Query: 392 LQAPTWSPSGRSLIFSRKKDG------DTGSKLYSIDLNGRNETLINTPAYASDP 440
             AP+ S  GR + F            +  + ++  D      T ++  +  ++ 
Sbjct: 224 SLAPSISADGRYVAFHSSATNLVSGVTNGTTHIFVHDRQTGATTRVSVASDGTEG 278


>gi|94984473|ref|YP_603837.1| peptidase S9, prolyl oligopeptidase active site region [Deinococcus
           geothermalis DSM 11300]
 gi|94554754|gb|ABF44668.1| a/b hydrolase superfamily protease and regulatory beta propeller
           domain [Deinococcus geothermalis DSM 11300]
          Length = 664

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 59/153 (38%), Gaps = 21/153 (13%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQ--------------SNATERLTNTLFINISAS 308
           P+ S +G+R +  + + E  D    D                    + LT     + S  
Sbjct: 23  PQVSPDGQRVVFVLSRIEEEDPQRPDPAFARPRYKSQLWLSGGGEAQPLTRGEGRDSSPR 82

Query: 309 YSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +SPD   + F  +  G K QL+++   G + KRI++ +  +  D  WSP G  + F   +
Sbjct: 83  WSPDGQTLAFVREEGGQKGQLFLLPLTGGEAKRITRFR-GAVQDVQWSPDGRFLTFLSTA 141

Query: 368 GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
            ++      + +  + R++           W P
Sbjct: 142 DDEDR----RDERGEARVITRPRYRFNGRDWLP 170



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 62/210 (29%), Gaps = 30/210 (14%)

Query: 216 EPRFSPNQQKVAYATYDDE------------DILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +P+ SP+ Q+V +     E                   +        + +        +P
Sbjct: 22  DPQVSPDGQRVVFVLSRIEEEDPQRPDPAFARPRYKSQLWLSGGGEAQPLTRGEGRDSSP 81

Query: 264 RFSSNGKRALISVQKDEA-MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           R+S +G+      ++      ++ + L     +R+T          +SPD   + F S  
Sbjct: 82  RWSPDGQTLAFVREEGGQKGQLFLLPLTGGEAKRITRFRGAVQDVQWSPDGRFLTFLSTA 141

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           + +++      +   + R+       +    W P+               +        +
Sbjct: 142 DDEDR-----RDERGEARVITRPRYRFNGRDWLPE-----------RPARLWRYDVAAEE 185

Query: 383 ERL-LVEDSNLQAPTWSPSGRSLIFSRKKD 411
               L  D  +    W P  R ++    + 
Sbjct: 186 LHEWLTPDVEVTGYAWWPDSRGVLLVSSRS 215



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 92/310 (29%), Gaps = 64/310 (20%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +      K+ L +    G          +     PR+SP+ Q +A+   +     ++
Sbjct: 47  PDPAFARPRYKSQLWLS---GGGEAQPLTRGEGRDSSPRWSPDGQTLAFVREEGGQKGQL 103

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA------------------ 281
           +L+        KRI  FR  +   ++S +G+        D+                   
Sbjct: 104 FLLPL-TGGEAKRITRFRGAVQDVQWSPDGRFLTFLSTADDEDRRDERGEARVITRPRYR 162

Query: 282 -----------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE------G 324
                        ++  D+ +                ++ PDS  ++  S R        
Sbjct: 163 FNGRDWLPERPARLWRYDVAAEELHEWLTPDVEVTGYAWWPDSRGVLLVSSRSEEDAAHW 222

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----SGEKFAIGVMKKD 379
           +++   +  +G        +       P   P G   A         S E   + ++  D
Sbjct: 223 RQEANTLHLDGERTHLTRWNSAIDAVIPH--PDGQRFALVGRPEGKGSPEDHHLFLVGPD 280

Query: 380 GSQERL----------LVE-----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           G+ +RL          LV       +    P W     +L+ S    G  G  L+ + L+
Sbjct: 281 GAWQRLDEGWDRPIGNLVGGDCHVGAFPSRPVWL-DAETLLVSSTVGGACG--LFRVRLD 337

Query: 425 GRNETLINTP 434
           G      + P
Sbjct: 338 GTVTAQDHDP 347



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 17/111 (15%)

Query: 350 FDPVWSPQGDLIAFT--------------KFSGEKFAIGVMKKDGSQERLLVED-SNLQA 394
            DP  SP G  + F                F+  ++   +    G + + L        +
Sbjct: 21  SDPQVSPDGQRVVFVLSRIEEEDPQRPDPAFARPRYKSQLWLSGGGEAQPLTRGEGRDSS 80

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
           P WSP G++L F R++ G  G +L+ + L G   + +        D QW  
Sbjct: 81  PRWSPDGQTLAFVREEGGQKG-QLFLLPLTGGEAKRITRFRGAVQDVQWSP 130


>gi|88801496|ref|ZP_01117024.1| putative protease [Polaribacter irgensii 23-P]
 gi|88782154|gb|EAR13331.1| putative protease [Polaribacter irgensii 23-P]
          Length = 1079

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 80/188 (42%), Gaps = 17/188 (9%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDR 322
             S NGKR ++S + D    I++  ++   +  +T++    + +A +SP   +I + SD 
Sbjct: 311 SISPNGKRVVMSSRGD----IFTNPIEFGDSRNITHSSDAADRAAIWSPKGDKIAWFSDA 366

Query: 323 EGK-EQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +GK   L++   +G+ +  I S       ++P WSP G  I+F     +   I ++    
Sbjct: 367 DGKGYALHLTNQDGTAKTEIISIGISKMAWEPNWSPDGKYISFV---DDDTRIRIVALKE 423

Query: 381 SQERLLVEDSNL-----QAPTWSPSGRSLIFSRKKDGD-TGSKLYSIDLNGRNETLINTP 434
              + +              TWSP    L +++  D      K++S  +  +   + +  
Sbjct: 424 KTIKTIDNAGKNLERGRMGITWSPDSNWLAYAKSGDNSLKQIKIWSA-VTNKTTAITDPF 482

Query: 435 AYASDPQW 442
           A +  P W
Sbjct: 483 ADSFSPAW 490



 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 57/269 (21%), Positives = 114/269 (42%), Gaps = 44/269 (16%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L P+      +P +  +     Y   D      V+  +T+ +   K+I  F+   +   
Sbjct: 202 TLLPNNKTTDKQPLWLGD---HVYFLSDRTHTSNVWSYNTKTNVL-KQITAFKGTAVK-- 255

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL----------TNTLFINIS-----ASY 309
            S +G +  I  ++     ++++DL++N T+RL          T   + N++     AS 
Sbjct: 256 -SLSGHQNTIIFEQAGY--LHTLDLKTNNTKRLKINITGDFPWTAIKWENVNDRITYASI 312

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSG 368
           SP+  ++V  S    +  ++       D + I+   +A+    +WSP+GD IA F+   G
Sbjct: 313 SPNGKRVVMSS----RGDIFTNPIEFGDSRNITHSSDAADRAAIWSPKGDKIAWFSDADG 368

Query: 369 EKFAIGVMKKDGSQERLLVEDS---NLQAPTWSPSGRSLIFSRKKDGDTGSKLY------ 419
           + +A+ +  +DG+ +  ++          P WSP G+ + F    D DT  ++       
Sbjct: 369 KGYALHLTNQDGTAKTEIISIGISKMAWEPNWSPDGKYISFV---DDDTRIRIVALKEKT 425

Query: 420 --SIDLNGRNETLINTP-AYASDPQWVGF 445
             +ID  G+N         ++ D  W+ +
Sbjct: 426 IKTIDNAGKNLERGRMGITWSPDSNWLAY 454



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 78/226 (34%), Gaps = 29/226 (12%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             ++A+A   D                  R+ +  +    P+ S NGK    S  K   +
Sbjct: 35  GNQIAFAYAGD------IWTTNLASNLTTRLTSTSAKESNPQISPNGKWITFSSNKSGIL 88

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQ 338
            +Y V +     +RLT     NI+  ++ D   ++F S+R        +LY + +NG   
Sbjct: 89  SVYIVAITGGEAKRLTWHTSENIARGWTNDGENVLFASNRNTAPSNFNRLYTIPANGGPA 148

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFS-----------GEKFAIGVMKKDGSQERLLV 387
            ++    E       ++  G  +   K             G+   + ++     +E LL 
Sbjct: 149 IKL---FEQWATSGSYAGDGKQMVIDKMRRWDEEWRDYRGGQNTPLIIIDLKTLKETLLP 205

Query: 388 ED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            + +  + P W   G  + F   +     S ++S +        I 
Sbjct: 206 NNKTTDKQPLWL--GDHVYFLSDR--THTSNVWSYNTKTNVLKQIT 247



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 67/222 (30%), Gaps = 18/222 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +  +     SPN ++V            ++        +     +  +   A  +S  G 
Sbjct: 304 NDRITYASISPNGKRVV-----MSSRGDIFTNPIEFGDSRNITHSSDAADRAAIWSPKGD 358

Query: 271 RALISVQKDE-AMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKE 326
           +       D     ++  +    A   +  ++ I+      ++SPD   I F  D     
Sbjct: 359 KIAWFSDADGKGYALHLTNQDGTAKTEII-SIGISKMAWEPNWSPDGKYISFVDD---DT 414

Query: 327 QLYVMQSNGSDQKRISQDK---EASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQ 382
           ++ ++       K I       E       WSP  + +A+ K        I +     ++
Sbjct: 415 RIRIVALKEKTIKTIDNAGKNLERGRMGITWSPDSNWLAYAKSGDNSLKQIKIWSAVTNK 474

Query: 383 ERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              + +      +P W    + L F    D   GS   +   
Sbjct: 475 TTAITDPFADSFSPAWDLDHKHLYFLASTDVALGSGWANTSA 516



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 93/258 (36%), Gaps = 27/258 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +N+     S       P+ SPN + + +++ +   IL VY++        KR+    S  
Sbjct: 53  SNLTTRLTSTSAKESNPQISPNGKWITFSS-NKSGILSVYIVAI-TGGEAKRLTWHTSEN 110

Query: 261 LAPRFSSNGKRALISVQKDEAMD----IYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +A  ++++G+  L +  ++ A      +Y++        +L        S SY+ D  Q+
Sbjct: 111 IARGWTNDGENVLFASNRNTAPSNFNRLYTIPANGGPAIKLFEQWA--TSGSYAGDGKQM 168

Query: 317 V----------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           V          +   R G+    ++    + ++ +  + + +   P+W   GD + F   
Sbjct: 169 VIDKMRRWDEEWRDYRGGQNTPLIIIDLKTLKETLLPNNKTTDKQPLWL--GDHVYFLSD 226

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +       +  + +         + S    ++IF      +    L+++DL   
Sbjct: 227 RTHTSNVWSYNTKTNVLKQITAFKGTAVKSLSGHQNTIIF------EQAGYLHTLDLKTN 280

Query: 427 NETLINTPAYASDPQWVG 444
           N   +        P W  
Sbjct: 281 NTKRLKINITGDFP-WTA 297



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 71/203 (34%), Gaps = 20/203 (9%)

Query: 174 NSRILFVSESVVSGII----KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           N RI + S S     +    +  +     +  + R +T S D       +SP   K+A+ 
Sbjct: 304 NDRITYASISPNGKRVVMSSRGDIFTNPIEFGDSRNITHSSDAADRAAIWSPKGDKIAWF 363

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDE-------A 281
           +  D     ++L +       + I      M   P +S +GK                  
Sbjct: 364 SDADGKGYALHLTNQDGTAKTEIISIGISKMAWEPNWSPDGKYISFVDDDTRIRIVALKE 423

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
             I ++D      ER    + I    ++SPDS+ + +  S     +Q+ +  +  +    
Sbjct: 424 KTIKTIDNAGKNLER--GRMGI----TWSPDSNWLAYAKSGDNSLKQIKIWSAVTNKTTA 477

Query: 341 ISQDKEASYFDPVWSPQGDLIAF 363
           I+ D  A  F P W      + F
Sbjct: 478 IT-DPFADSFSPAWDLDHKHLYF 499


>gi|120598104|ref|YP_962678.1| peptidase S41 [Shewanella sp. W3-18-1]
 gi|120558197|gb|ABM24124.1| peptidase S41 [Shewanella sp. W3-18-1]
          Length = 1094

 Score = 91.2 bits (225), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 112/297 (37%), Gaps = 36/297 (12%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---- 228
           +  R+ F+S+S  +      L     DG++ + LT  +D  +   R   +Q KV +    
Sbjct: 226 WQDRLYFISDSDGNDN----LWSSALDGSDAKQLTQFKDWQVRGARM--DQGKVVFQLGA 279

Query: 229 ------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                      + +L + L     +R    + +      +   +  G + +I+ +     
Sbjct: 280 DIHVFDIAAAKDSLLNIELTSDFAERREHWVKDPMDYAASTNLAPAGDKVVITAR----S 335

Query: 283 DIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKR 340
            +    +  +   ++     +    A  S D   +   SD  G+++++   ++GS   K+
Sbjct: 336 HVAIAGIDGSRLVQVALPGTYRVREAVLSQDGKSVYAISDMTGQQEIWQFPADGSSGAKQ 395

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
           +++D          S  G  IA     G    + ++    +  + ++       P     
Sbjct: 396 LTKDGHTLRMSLNLSSDGRFIAHDDNDG---NVWLLDLKKNTNQKIITHGEGLGPYADIR 452

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLIN------TPAYASDPQWVGFM 446
           WS   R +  ++ + G    ++    ++  + ETL +      +P ++SD QW+ F+
Sbjct: 453 WSGDSRFIALTKSEIGKQRPQIVLYSVDENKAETLTSDKYESYSPTFSSDGQWLYFL 509



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 67/199 (33%), Gaps = 15/199 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P   KV            V +      R  +        +     S +GK         
Sbjct: 323 APAGDKVVITARSH-----VAIAGIDGSRLVQVALPGTYRVREAVLSQDGKSVYAISDMT 377

Query: 280 EAMDIYSVDLQSN-ATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              +I+      +   ++LT +   + +S + S D     F +  +    ++++    + 
Sbjct: 378 GQQEIWQFPADGSSGAKQLTKDGHTLRMSLNLSSDGR---FIAHDDNDGNVWLLDLKKNT 434

Query: 338 QKRISQDKEA--SYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVED-SNL 392
            ++I    E    Y D  WS     IA TK     ++  I +   D ++   L  D    
Sbjct: 435 NQKIITHGEGLGPYADIRWSGDSRFIALTKSEIGKQRPQIVLYSVDENKAETLTSDKYES 494

Query: 393 QAPTWSPSGRSLIFSRKKD 411
            +PT+S  G+ L F   + 
Sbjct: 495 YSPTFSSDGQWLYFLSNRQ 513



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 107/283 (37%), Gaps = 27/283 (9%)

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSPAS 150
           ++   + +F+DW   GA++   G+V+     +L  +  ++D+   K  ++  +  S  A 
Sbjct: 250 SDAKQLTQFKDWQVRGARMD-QGKVVF----QLGADIHVFDIAAAKDSLLNIELTSDFAE 304

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R+            +        S  L  +   V    ++ + +   DG+ +  +    
Sbjct: 305 RRE----------HWVKDPMDYAASTNLAPAGDKVVITARSHVAIAGIDGSRLVQVALPG 354

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNG 269
              + E   S + + V YA  D      ++          K++  +  ++ ++   SS+G
Sbjct: 355 TYRVREAVLSQDGKSV-YAISDMTGQQEIWQFPADGSSGAKQLTKDGHTLRMSLNLSSDG 413

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQIVFESDREGK- 325
           +        D   +++ +DL+ N  +++      L       +S DS  I       GK 
Sbjct: 414 RFIA---HDDNDGNVWLLDLKKNTNQKIITHGEGLGPYADIRWSGDSRFIALTKSEIGKQ 470

Query: 326 -EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             Q+ +   + +  + ++ DK  SY  P +S  G  + F    
Sbjct: 471 RPQIVLYSVDENKAETLTSDKYESY-SPTFSSDGQWLYFLSNR 512



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 26/206 (12%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           + +    AP      +  + + + D    +++  L   A  RLT+     + A+ S D  
Sbjct: 29  SNQGYYRAPALH--NQTLVFTAEGD----LWTQTLGQKAATRLTSLPAEELGATISADGK 82

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            + + ++ EG  ++YV+   G   KR+S +  +      W+ +G+ I ++  +G   A  
Sbjct: 83  WVAYVANYEGASEVYVIPITGGVAKRVSFE-NSRVRVQGWTAKGE-ILYSTDTGFGPANN 140

Query: 375 VMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRK-----------KDGDTGSKLYS 420
            M +    + L   D   ++            + F+R              G    +L+ 
Sbjct: 141 WMLRSVDPQTLTTTDLPLADAVEGVIDDRNEYVYFTRFGLQVTGDNAKVYRGGAKGELWR 200

Query: 421 IDLNGRNETLI---NTPAYASDPQ-W 442
             L  + E  +           P  W
Sbjct: 201 FKLGSKTEAQLLSGQHDGSVRQPMLW 226



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 68/208 (32%), Gaps = 20/208 (9%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              T   +A  R+ +  +  L    S++GK        + A ++Y + +     +R++  
Sbjct: 53  WTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVYVIPITGGVAKRVSFE 112

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   ++     +       G    ++++S        +    A   + V   + + 
Sbjct: 113 NSRVRVQGWTAKGEILYSTDTGFGPANNWMLRSVDPQTLTTTDLPLADAVEGVIDDRNEY 172

Query: 361 IAFTKF-------------SGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSL 404
           + FT+F              G K  +   K     E  L+    D +++ P        L
Sbjct: 173 VYFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQD--RL 230

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            F    DG     L+S  L+G +   + 
Sbjct: 231 YFISDSDG--NDNLWSSALDGSDAKQLT 256



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 68/213 (31%), Gaps = 25/213 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G        S          S + + VAY   + E    VY++        KR+    S 
Sbjct: 58  GQKAATRLTSLPAEELGATISADGKWVAYVA-NYEGASEVYVIPI-TGGVAKRVSFENSR 115

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQI 316
           +    +++ G   L S           + L+S   + LT T   L   +       +  +
Sbjct: 116 VRVQGWTAKG-EILYSTDTGFGPANNWM-LRSVDPQTLTTTDLPLADAVEGVIDDRNEYV 173

Query: 317 VFES------------DREG-KEQLYVMQSNG-SDQKRISQDKEASYFDPV-WSPQGDLI 361
            F               R G K +L+  +    ++ + +S   + S   P+ W    D +
Sbjct: 174 YFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQ---DRL 230

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            F   S     +     DGS  + L +  + Q 
Sbjct: 231 YFISDSDGNDNLWSSALDGSDAKQLTQFKDWQV 263



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 57/176 (32%), Gaps = 25/176 (14%)

Query: 275 SVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +     +++   L S    +L                D  ++ F SD +G + L+   
Sbjct: 189 VYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQD--RLYFISDSDGNDNLWSSA 246

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            +GSD K+++Q K+          QG ++         F I   K D      L  D   
Sbjct: 247 LDGSDAKQLTQFKDWQVRGARM-DQGKVVFQLGADIHVFDIAAAK-DSLLNIELTSDFAE 304

Query: 393 QAPTW-------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +   W             +P+G  ++ + +      S +    ++G     +  P 
Sbjct: 305 RREHWVKDPMDYAASTNLAPAGDKVVITAR------SHVAIAGIDGSRLVQVALPG 354


>gi|73670805|ref|YP_306820.1| hypothetical protein Mbar_A3367 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397967|gb|AAZ72240.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 557

 Score = 90.8 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 67/370 (18%), Positives = 127/370 (34%), Gaps = 55/370 (14%)

Query: 97  IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
           +    +W+  G  +LVT            V+  L D           +  + +       
Sbjct: 46  VVTSTEWSPDGQYLLVTCS-KMNSPLNYIVKHYLLDTNSH-TFGEINYGINGSD------ 97

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-------- 208
             ++ I Q+     GD   +I F    +      +   + + DG N+R +          
Sbjct: 98  --TNGILQAKWTPSGD---KIYFGVSRIEETNSGHCYIICNPDGTNLRCIGTNYTDLSYI 152

Query: 209 ----SRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                         ++ +  K+ +           VY+ D +     + +         P
Sbjct: 153 IKNLGSIGFQRNLNWNQDSNKIVFEWEKPGNHSPGVYIADGKGTIISELLSATYPQ---P 209

Query: 264 R-FSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             + S+    +     + +  DE   I +   ++              + S SPD  +I+
Sbjct: 210 ALYDSDKVFIVKDEGTVVLANDEGDLIQTFQPENKDERY--------CAFSLSPDRKKIM 261

Query: 318 FE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           F   S      Q YV   +GS+ K      E  + +  W P G L+       +   + +
Sbjct: 262 FAAGSSDSYNLQTYVSNIDGSNLKGNISYNENLWANESWQPNGSLLLV----NQNRNLYI 317

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           ++ D + +RLL + +  ++  W P G+ ++F        G+KLYSID++G N T I    
Sbjct: 318 VEGDENNKRLLYKGNASES-QWFPDGKKILFVEN-----GNKLYSIDIDGTNITFITNFG 371

Query: 436 YASDPQWVGF 445
             S   W  F
Sbjct: 372 QTSSNTWKYF 381



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 71/212 (33%), Gaps = 38/212 (17%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   +  +  S        V + DG+N++      + +     + PN   +      + 
Sbjct: 256 DRKKIMFAAGSSDSYNLQTYVSNIDGSNLKGNISYNENLWANESWQPNGSLLLVNQNRN- 314

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                 L     D   KR+  ++      ++  +GK+ L     +    +YS+D+     
Sbjct: 315 ------LYIVEGDENNKRLL-YKGNASESQWFPDGKKILFVENGN---KLYSIDIDGTNI 364

Query: 295 ERLTN--------TLFINISASY--SPDSSQIVFES---DREGKEQ-------------L 328
             +TN          + +    +  SP    I F S      GK               L
Sbjct: 365 TFITNFGQTSSNTWKYFDGGQHFSISPSGKIIAFMSAFDSATGKAIENYNIVNLNIAAPL 424

Query: 329 YVMQSNGSDQKRISQDKEASYFDPV-WSPQGD 359
           +++ S GS+  +++   +  Y   + WSP G 
Sbjct: 425 FIVNSEGSNLTQVTPAVKGRYDTCINWSPDGK 456



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 80/228 (35%), Gaps = 38/228 (16%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +   ++D+       SP+++K+ +A    +   L+ Y+ +         I    ++    
Sbjct: 239 FQPENKDERYCAFSLSPDRKKIMFAAGSSDSYNLQTYVSNIDGSNLKGNISYNENLWANE 298

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +  NG   L+    ++  ++Y V+   N    L         + + PD  +I+F    E
Sbjct: 299 SWQPNGSLLLV----NQNRNLYIVEGDENNKRLL--YKGNASESQWFPDGKKILFV---E 349

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYF---------DPVWSPQGDLIAFTKFSG------ 368
              +LY +  +G++   I+   + S               SP G +IAF           
Sbjct: 350 NGNKLYSIDIDGTNITFITNFGQTSSNTWKYFDGGQHFSISPSGKIIAFMSAFDSATGKA 409

Query: 369 -EKFAI---------GVMKKDGSQERLLV---EDSNLQAPTWSPSGRS 403
            E + I          ++  +GS    +    +        WSP G+ 
Sbjct: 410 IENYNIVNLNIAAPLFIVNSEGSNLTQVTPAVKGRYDTCINWSPDGKQ 457



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 52/158 (32%), Gaps = 38/158 (24%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               +L +++ D  N R L         E ++ P+ +K+ +     E+  ++Y +D    
Sbjct: 310 NQNRNLYIVEGDENNKRLLYKGN---ASESQWFPDGKKILFV----ENGNKLYSIDID-G 361

Query: 248 RAPKRIGNFRSMILAPRF-----------SSNGKRALISVQKDEAM-------------- 282
                I NF     +  +           S +GK        D A               
Sbjct: 362 TNITFITNF-GQTSSNTWKYFDGGQHFSISPSGKIIAFMSAFDSATGKAIENYNIVNLNI 420

Query: 283 --DIYSVDLQSNATERLTNT--LFINISASYSPDSSQI 316
              ++ V+ + +   ++T       +   ++SPD  Q 
Sbjct: 421 AAPLFIVNSEGSNLTQVTPAVKGRYDTCINWSPDGKQF 458


>gi|254411915|ref|ZP_05025691.1| hypothetical protein MC7420_4881 [Microcoleus chthonoplastes PCC
            7420]
 gi|196181637|gb|EDX76625.1| hypothetical protein MC7420_4881 [Microcoleus chthonoplastes PCC
            7420]
          Length = 1176

 Score = 90.8 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 88/262 (33%), Gaps = 19/262 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ + D                ++   +SPNQ  +A  + D      + L D  
Sbjct: 870  SSSNDKTVKLWDTTTGECLKTLQGHSNWVWSVVWSPNQPILASGSADQ----TIKLWDAD 925

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
                 K +    S++ +  +S +G R L S   D+ + ++  D  +    + L     I 
Sbjct: 926  RGECLKTLVGHSSVVSSVAWSPDG-RILASGSYDQTIKLW--DTDTGECLKTLRGHSNII 982

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++SPD   +   S     + + V   +  +  +         +   W+P G  +A  
Sbjct: 983  WSVAWSPDGRTLASCSS---DQTIKVWDIHTGECLKTLSGHHHIIWSVTWNPDGRTLASG 1039

Query: 365  KFSGEKFAIGVMKKDGSQ-ERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    I V      +  + L    +++ +  W+P GR L        D   KL+   
Sbjct: 1040 SSDQT---IKVWDTHTGECLKTLSGHTNSISSVAWNPDGRLLATGSH---DQTVKLWDTH 1093

Query: 423  LNGRNETLINTPAYASDPQWVG 444
             +    TL+    +     W  
Sbjct: 1094 TDECLNTLLGHSNWVGFVAWSA 1115



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/357 (15%), Positives = 116/357 (32%), Gaps = 49/357 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           G+++    +   V  +LWD+        + G        +W    H  S    Q+I    
Sbjct: 656 GQILASSSNDQTV--KLWDIHTGECLNTLQGHTHIVCSVAWSPQGHLASGSADQTIK--- 710

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGAN-------------------IRYLTPSRD 211
             +++R      ++            + DG                      R       
Sbjct: 711 -LWDTRSGTCQNTLQGHQDWIWSVAWNPDGYTLASSSSDQTIKLWDTRNGECRNTLQGHR 769

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             ++   + P+   +A  ++D      V L DT   +  K +   R+ I +  +S + + 
Sbjct: 770 DWIWSIAWHPDGCLLASGSHDQ----TVKLWDTHTGKCLKTLQGQRNWIWSVAWSPDKQT 825

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLY 329
              S   D+ + ++  D ++      T   +++   S ++S D   +   S+    + + 
Sbjct: 826 LA-SGSADQTVKLW--DTRTGQCWN-TWQGYLDSALSVAWSQDGQILASSSN---DKTVK 878

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLV 387
           +  +   +  +  Q      +  VWSP   ++A          I +   D  +  + L+ 
Sbjct: 879 LWDTTTGECLKTLQGHSNWVWSVVWSPNQPILASGSADQT---IKLWDADRGECLKTLVG 935

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             S + +  WSP GR L        D   KL+  D     +TL           W  
Sbjct: 936 HSSVVSSVAWSPDGRILASGSY---DQTIKLWDTDTGECLKTLRGHSNIIWSVAWSP 989



 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 86/264 (32%), Gaps = 22/264 (8%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                    L  +  DG            +++   +SP+ + +A ++ D      + L D
Sbjct: 577 TGDNTPDVRLWRV-SDGQPW-LTLQGHTNLVWSVAWSPDGRTLATSSSDK----TIKLWD 630

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLF 302
           TR  +  K +   +  +L+  +  +G + L S   D+ + ++  D+ +      L     
Sbjct: 631 TRTGKCLKTLQGHQDWVLSVAWHPDG-QILASSSNDQTVKLW--DIHTGECLNTLQGHTH 687

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I  S ++SP        +     + + +  +     +   Q  +   +   W+P G  +A
Sbjct: 688 IVCSVAWSPQGH----LASGSADQTIKLWDTRSGTCQNTLQGHQDWIWSVAWNPDGYTLA 743

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
            +        I +      + R  ++       +  W P G  L        D   KL+ 
Sbjct: 744 SSSSDQT---IKLWDTRNGECRNTLQGHRDWIWSIAWHPDGCLLASGSH---DQTVKLWD 797

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
                  +TL     +     W  
Sbjct: 798 THTGKCLKTLQGQRNWIWSVAWSP 821



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 88/239 (36%), Gaps = 19/239 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D            +   ++   +SP++Q +A  + D      V L DTR
Sbjct: 786  SGSHDQTVKLWDTHTGKCLKTLQGQRNWIWSVAWSPDKQTLASGSADQ----TVKLWDTR 841

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
              +       +    L+  +S +G + L S   D+ + ++  D  +    + L       
Sbjct: 842  TGQCWNTWQGYLDSALSVAWSQDG-QILASSSNDKTVKLW--DTTTGECLKTLQGHSNWV 898

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S  +SP+   +   S     + + +  ++  +  +      +      WSP G ++A  
Sbjct: 899  WSVVWSPNQPILASGS---ADQTIKLWDADRGECLKTLVGHSSVVSSVAWSPDGRILASG 955

Query: 365  KFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +      I +   D  +  + L    + + +  WSP GR+L        D   K++ I
Sbjct: 956  SYDQT---IKLWDTDTGECLKTLRGHSNIIWSVAWSPDGRTLA---SCSSDQTIKVWDI 1008



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 84/228 (36%), Gaps = 16/228 (7%)

Query: 181  SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
             +++ SG    ++ + D R G          D  L    +S + Q +A ++ D      V
Sbjct: 823  KQTLASGSADQTVKLWDTRTGQCWNTWQGYLDSALSV-AWSQDGQILASSSNDK----TV 877

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             L DT      K +    + + +  +S N +  L S   D+ + ++  D +    + L  
Sbjct: 878  KLWDTTTGECLKTLQGHSNWVWSVVWSPN-QPILASGSADQTIKLWDAD-RGECLKTLVG 935

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               +  S ++SPD   +   S     + + +  ++  +  +  +      +   WSP G 
Sbjct: 936  HSSVVSSVAWSPDGRILASGSY---DQTIKLWDTDTGECLKTLRGHSNIIWSVAWSPDGR 992

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
             +A          I V      +    +   +    + TW+P GR+L 
Sbjct: 993  TLASCSSDQT---IKVWDIHTGECLKTLSGHHHIIWSVTWNPDGRTLA 1037



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 68/205 (33%), Gaps = 14/205 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D D             I++   +SP+ + +A  + D      + + D  
Sbjct: 954  SGSYDQTIKLWDTDTGECLKTLRGHSNIIWSVAWSPDGRTLASCSSDQ----TIKVWDIH 1009

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
                 K +     +I +  ++ +G+    S   D+ + ++  D  +    + L+      
Sbjct: 1010 TGECLKTLSGHHHIIWSVTWNPDGRTLA-SGSSDQTIKVW--DTHTGECLKTLSGHTNSI 1066

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S +++PD   +   S     + + +  ++  +                WS     +A  
Sbjct: 1067 SSVAWNPDGRLLATGSH---DQTVKLWDTHTDECLNTLLGHSNWVGFVAWSANSQTLASG 1123

Query: 365  KFSGEKFAIGVMKKDGSQERLLVED 389
                    I +   +  + +  ++ 
Sbjct: 1124 SSDET---IKIWDVNTGECQKTLKS 1145



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 79/229 (34%), Gaps = 24/229 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q++A      ++   V L      +    +    +++ +  +S +G+    S  
Sbjct: 567 AFSPDGQQLA----TGDNTPDVRLWRVSDGQPWLTLQGHTNLVWSVAWSPDGRTLATSSS 622

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D+ + ++  D ++    + L       +S ++ PD   +   S+    + + +   +  
Sbjct: 623 -DKTIKLW--DTRTGKCLKTLQGHQDWVLSVAWHPDGQILASSSN---DQTVKLWDIHTG 676

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +     Q          WSPQG L            I +        +  ++       +
Sbjct: 677 ECLNTLQGHTHIVCSVAWSPQGHL----ASGSADQTIKLWDTRSGTCQNTLQGHQDWIWS 732

Query: 397 --WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             W+P G +L  S     D   KL+    + RN    NT     D  W 
Sbjct: 733 VAWNPDGYTLASSSS---DQTIKLW----DTRNGECRNTLQGHRDWIWS 774



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 88/268 (32%), Gaps = 30/268 (11%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++ +     ++ + D                +    + P+ Q +A ++ D      V L
Sbjct: 615 RTLATSSSDKTIKLWDTRTGKCLKTLQGHQDWVLSVAWHPDGQILASSSNDQ----TVKL 670

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D         +     ++ +  +S  G   L S   D+ + ++  D +S   +  L   
Sbjct: 671 WDIHTGECLNTLQGHTHIVCSVAWSPQGH--LASGSADQTIKLW--DTRSGTCQNTLQGH 726

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S +++PD   +   S     + + +  +   + +   Q      +   W P G L
Sbjct: 727 QDWIWSVAWNPDGYTLASSSS---DQTIKLWDTRNGECRNTLQGHRDWIWSIAWHPDGCL 783

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +A +    +   +      G   + L    N   +  WSP  ++L        D   KL+
Sbjct: 784 LA-SGSHDQTVKLWDTHT-GKCLKTLQGQRNWIWSVAWSPDKQTLA---SGSADQTVKLW 838

Query: 420 SIDLNGRNETLINTPAYASDPQWVGFMD 447
               + R     NT        W G++D
Sbjct: 839 ----DTRTGQCWNT--------WQGYLD 854



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 49/144 (34%), Gaps = 6/144 (4%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             +++  FS +G++   +      + ++ V         L     +  S ++SPD   + 
Sbjct: 561 GGVVSAAFSPDGQQLA-TGDNTPDVRLWRVS-DGQPWLTLQGHTNLVWSVAWSPDGRTLA 618

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S     + + +  +      +  Q  +       W P G ++A +  + +   +  + 
Sbjct: 619 TSSS---DKTIKLWDTRTGKCLKTLQGHQDWVLSVAWHPDGQILA-SSSNDQTVKLWDIH 674

Query: 378 KDGSQERLLVEDSNLQAPTWSPSG 401
                  L      + +  WSP G
Sbjct: 675 TGECLNTLQGHTHIVCSVAWSPQG 698



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            TL   +SA++SPD  Q+      +    + + + +        Q      +   WSP G
Sbjct: 558 QTLGGVVSAAFSPDGQQLA---TGDNTPDVRLWRVSDGQPWLTLQGHTNLVWSVAWSPDG 614

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGS 416
             +A +        I +      +    ++       +  W P G+ L  S     D   
Sbjct: 615 RTLATSSSDKT---IKLWDTRTGKCLKTLQGHQDWVLSVAWHPDGQILASSSN---DQTV 668

Query: 417 KLYSI 421
           KL+ I
Sbjct: 669 KLWDI 673


>gi|149174001|ref|ZP_01852629.1| probable TolB protein (Precursor) [Planctomyces maris DSM 8797]
 gi|148846981|gb|EDL61316.1| probable TolB protein (Precursor) [Planctomyces maris DSM 8797]
          Length = 309

 Score = 90.8 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 87/234 (37%), Gaps = 22/234 (9%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILF-EPRFSPNQQKVA---YATYDDEDILRVYLMDTR 245
           +    +   +G + +    S D      P FSP+  K+A   + + + E    V +M   
Sbjct: 35  RTRFYIASPEGKDPKQYYVSEDYYNTGSPTFSPDGSKLAHDCWKSQEGETFSNVKIMVAN 94

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            D +  +I         P FS  G R + S  +     +  ++   +    + +  +   
Sbjct: 95  ADGSDPKII---GAGAMPSFSPGGNRIVFS--QPSPSGVAIMNADGSNRTLIESGAW--- 146

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY----FDPVWSPQGDLI 361
            A +SPD  +I + +   GK  L +       +  +  + E+ Y    ++  WSP  + +
Sbjct: 147 GAQWSPDGKKIAYRAYTSGKANLRIYDLIEDTRFDVFPEGESPYSVISWNMAWSPDSNWV 206

Query: 362 AFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRK 409
            F   +   + + +  +   G +E   V   +  +P     W P G  ++F   
Sbjct: 207 CFLGRNAADKMYEVVTVNVAGMKEGYKVHYRSKVSPYQDMAWHPQGDMIVFGSD 260



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 27/184 (14%)

Query: 281 AMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIV---FESDRE---GKEQLYVMQ 332
               Y    +    ++  ++   +   S ++SPD S++    ++S         ++ V  
Sbjct: 35  RTRFYIASPEGKDPKQYYVSEDYYNTGSPTFSPDGSKLAHDCWKSQEGETFSNVKIMVAN 94

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           ++GSD K I      +   P +SP G+ I F++ S     + +M  DGS  R L+E    
Sbjct: 95  ADGSDPKII-----GAGAMPSFSPGGNRIVFSQPSPSG--VAIMNADGSN-RTLIESGAW 146

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP----------AYASDPQW 442
            A  WSP G+ + +     G    ++Y +  + R +                A++ D  W
Sbjct: 147 GA-QWSPDGKKIAYRAYTSGKANLRIYDLIEDTRFDVFPEGESPYSVISWNMAWSPDSNW 205

Query: 443 VGFM 446
           V F+
Sbjct: 206 VCFL 209



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 70/195 (35%), Gaps = 36/195 (18%)

Query: 253 IGNFRSMILAPRFSSNGKRAL--ISVQKDE----AMDIYSVDLQSNATERLTNTLFINIS 306
           +        +P FS +G +        ++      + I   +   +  + +         
Sbjct: 53  VSEDYYNTGSPTFSPDGSKLAHDCWKSQEGETFSNVKIMVANADGSDPKII----GAGAM 108

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SP  ++IVF   +     + +M ++GS++  I    E+  +   WSP G  IA+  +
Sbjct: 109 PSFSPGGNRIVFS--QPSPSGVAIMNADGSNRTLI----ESGAWGAQWSPDGKKIAYRAY 162

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAP-------------TWSPSGRSLIFSRKKDGD 413
           +  K  + +         L+ +      P              WSP    + F  +   D
Sbjct: 163 TSGKANLRIYD-------LIEDTRFDVFPEGESPYSVISWNMAWSPDSNWVCFLGRNAAD 215

Query: 414 TGSKLYSIDLNGRNE 428
              ++ ++++ G  E
Sbjct: 216 KMYEVVTVNVAGMKE 230



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 83/229 (36%), Gaps = 24/229 (10%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V + DG++ + +          P FSP   ++ ++         V +M+         
Sbjct: 90  IMVANADGSDPKIIGAG-----AMPSFSPGGNRIVFS---QPSPSGVAIMNADGSNR--- 138

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTLF----INISA 307
                S     ++S +GK+           ++   DL +    +           I+ + 
Sbjct: 139 -TLIESGAWGAQWSPDGKKIAYRAYTSGKANLRIYDLIEDTRFDVFPEGESPYSVISWNM 197

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLIAF 363
           ++SPDS+ + F       +   V+  N +  K   +    S   P     W PQGD+I F
Sbjct: 198 AWSPDSNWVCFLGRNAADKMYEVVTVNVAGMKEGYKVHYRSKVSPYQDMAWHPQGDMIVF 257

Query: 364 TKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRK 409
              +  +  +     +        + V+ +     +++P G+ L+F+ +
Sbjct: 258 GSDTKPRQLLKFNPAEDKAPEPLDITVDGNINGDVSFTPDGQHLLFNAR 306



 Score = 37.3 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 45/156 (28%), Gaps = 21/156 (13%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES----------- 183
           D K+I  + + S  A+ R     I D I  +      +  S    +S +           
Sbjct: 153 DGKKIAYRAYTSGKANLR-----IYDLIEDTRFDVFPEGESPYSVISWNMAWSPDSNWVC 207

Query: 184 ---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILR 238
                +      +  ++  G    Y    R ++       + P    + + +      L 
Sbjct: 208 FLGRNAADKMYEVVTVNVAGMKEGYKVHYRSKVSPYQDMAWHPQGDMIVFGSDTKPRQLL 267

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            +         P  I    ++     F+ +G+  L 
Sbjct: 268 KFNPAEDKAPEPLDITVDGNINGDVSFTPDGQHLLF 303


>gi|186681444|ref|YP_001864640.1| hypothetical protein Npun_F0966 [Nostoc punctiforme PCC 73102]
 gi|186463896|gb|ACC79697.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1211

 Score = 90.8 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 82/222 (36%), Gaps = 20/222 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              R         +    FSP+ + +A A+ D     R++ +     +  +    ++  +
Sbjct: 591 GRERNRLEGHQSAVNSVSFSPDGKTIATASQD--KTARLWNLQ---GQLLQEFKGYQGTV 645

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           L+  FS +GK    +   D+   ++  +LQ    +            S+SPD   I   +
Sbjct: 646 LSVSFSPDGKTIA-TASSDKTARLW--NLQGKLLQEFRGHRS-GRGMSFSPDGKTIA-TA 700

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G  +L+ +Q       +  +  + S     +SP G  IA            +    G
Sbjct: 701 SEDGTTRLWNLQ---GQLLQEFKGHQGSDEGVSFSPDGKTIATASQDKTA---RLWNLQG 754

Query: 381 SQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +        + + ++SP G+++  +     D  ++L+++
Sbjct: 755 QLLQEFKGHQGEVSSVSFSPDGKTIATASS---DKTARLWNL 793



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 97/273 (35%), Gaps = 31/273 (11%)

Query: 164  QSITGEKGDFNSRILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            Q +   KG  + R +  S    +        +  + +  G  ++        ++    FS
Sbjct: 919  QLLQEFKGHRSGRGVSFSPDGKTIATASADRTAQLWNLQGQLLQE-FKGHQNVVSSVSFS 977

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+ + +A A++D     R++ +     +  +     +  + +  FS +GK    +   DE
Sbjct: 978  PDGKTIATASWDC--TARLWNLQ---GQLLQEFKGHQGAVNSVSFSPDGKTIA-TASVDE 1031

Query: 281  AMDIYSVDLQSNATERLTNTLFINISA--------SYSPDSSQIVFESDREGKEQLYVMQ 332
               ++  +LQ    +          SA        S+SPD   I   +  +   QL+ +Q
Sbjct: 1032 TARLW--NLQGQLLQEFKGHQSGVNSAKFSAVNSVSFSPDGKTIA-TASSDNTAQLWNLQ 1088

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSN 391
                   +  +  +       +SP G  IA            +    G   +        
Sbjct: 1089 ---GQLLQEFKGHQGLVLSVSFSPDGKTIATASSDNTA---RLWNLQGQLLQEFKGHQRG 1142

Query: 392  LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            + + ++SP G+++  +     D   KL+ +DL+
Sbjct: 1143 VNSVSFSPDGKTIATASY---DKTIKLWDLDLH 1172



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 90/245 (36%), Gaps = 21/245 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ +     +  + +  G  ++     R        FSP+ + +A A+ D        L
Sbjct: 900  KTIATASEDGTAQLWNLQGQLLQEFKGHRSGRGV--SFSPDGKTIATASADR----TAQL 953

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             + +  +  +     ++++ +  FS +GK    +   D    ++  +LQ    +      
Sbjct: 954  WNLQ-GQLLQEFKGHQNVVSSVSFSPDGKTIA-TASWDCTARLW--NLQGQLLQEFKGHQ 1009

Query: 302  FINISASYSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                S S+SPD   I   S     R    Q  ++Q     Q  ++  K ++     +SP 
Sbjct: 1010 GAVNSVSFSPDGKTIATASVDETARLWNLQGQLLQEFKGHQSGVNSAKFSAVNSVSFSPD 1069

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  IA            +    G   +        + + ++SP G+++  +     D  +
Sbjct: 1070 GKTIATASSDNTA---QLWNLQGQLLQEFKGHQGLVLSVSFSPDGKTIATASS---DNTA 1123

Query: 417  KLYSI 421
            +L+++
Sbjct: 1124 RLWNL 1128



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 90/241 (37%), Gaps = 21/241 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ +     +  + +  G  ++       + +    FS + + +A A+ D     R++ 
Sbjct: 777 KTIATASSDKTARLWNLQGQLLQE-FKGHQRGVNSVSFSLDGKTIATASSD--KTARLWN 833

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +     +  +     + ++L+  FS +GK    +   D+   ++  +LQ    +      
Sbjct: 834 LQ---GQLLQEFKGHQGLVLSVSFSPDGKTIA-TSSDDKTARLW--NLQRQLLQEFKGHQ 887

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S S+SPD   I   +  +G  QL+     G   +        S     +SP G  I
Sbjct: 888 GEVSSVSFSPDGKTIA-TASEDGTAQLW--NLQGQLLQE--FKGHRSGRGVSFSPDGKTI 942

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           A            +    G   +      N + + ++SP G+++  +     D  ++L++
Sbjct: 943 ATASADRTA---QLWNLQGQLLQEFKGHQNVVSSVSFSPDGKTIATASW---DCTARLWN 996

Query: 421 I 421
           +
Sbjct: 997 L 997



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 90/243 (37%), Gaps = 33/243 (13%)

Query: 191 NSLCVMDRDG----ANIR----YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++     DG     N++                  FSP+ + +A A+ D     R++ +
Sbjct: 695 KTIATASEDGTTRLWNLQGQLLQEFKGHQGSDEGVSFSPDGKTIATASQD--KTARLWNL 752

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                +  +     +  + +  FS +GK    +   D+   ++  +LQ    +       
Sbjct: 753 Q---GQLLQEFKGHQGEVSSVSFSPDGKTIA-TASSDKTARLW--NLQGQLLQEFKGHQR 806

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S S+S D   I   +  +   +L+ +Q       +  +  +       +SP G  IA
Sbjct: 807 GVNSVSFSLDGKTIA-TASSDKTARLWNLQ---GQLLQEFKGHQGLVLSVSFSPDGKTIA 862

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            T    +   +  +     Q +LL E       + + ++SP G+++  + +   D  ++L
Sbjct: 863 -TSSDDKTARLWNL-----QRQLLQEFKGHQGEVSSVSFSPDGKTIATASE---DGTAQL 913

Query: 419 YSI 421
           +++
Sbjct: 914 WNL 916



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 7/135 (5%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           + +V +Q     RL        S S+SPD   I   + ++   +L+ +Q       +  +
Sbjct: 584 LQTVLVQGRERNRLEGHQSAVNSVSFSPDGKTIA-TASQDKTARLWNLQ---GQLLQEFK 639

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             + +     +SP G  IA            +    G   +      + +  ++SP G++
Sbjct: 640 GYQGTVLSVSFSPDGKTIATASSDKTA---RLWNLQGKLLQEFRGHRSGRGMSFSPDGKT 696

Query: 404 LIFSRKKDGDTGSKL 418
           +  + +        L
Sbjct: 697 IATASEDGTTRLWNL 711


>gi|21228844|ref|NP_634766.1| hypothetical protein MM_2742 [Methanosarcina mazei Go1]
 gi|20907367|gb|AAM32438.1| hypothetical protein MM_2742 [Methanosarcina mazei Go1]
          Length = 768

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 89/241 (36%), Gaps = 21/241 (8%)

Query: 206 LTPSRDQILFEPRFSPN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           L+ + +      R SP     +V +    +E       M         +I         P
Sbjct: 55  LSINNNSSQIASRCSPAIYGDRVVWEIIRNEGSNNDIYMYNVSTSKETQITTSGKANY-P 113

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
               +  + + +  ++E   IY  +L +    ++T    I           +I++  DR 
Sbjct: 114 AIYED--KVVWTDYRNENNHIYMYNLSAERETQITTNESIKSGPEIY--GDRIIWIDDRN 169

Query: 324 GKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-S 381
           GK+ +YV   + + + +I+ +  AS Y  P     GD I +         I +       
Sbjct: 170 GKQDIYVYNISTTKETQITTNGSASEYGSPAI--YGDRIVWQDERDGNSDIYMYNLSTEK 227

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDG--------DTGSKLYSIDLNGRNETLINT 433
           + R+ + +S+ + P     G  ++++  ++         ++ S +Y  DL+   ET I +
Sbjct: 228 ETRITINESSQEDPAI--YGNRIVWTDYRNSKESSTFYMNSNSDIYMYDLSTSTETQITS 285

Query: 434 P 434
            
Sbjct: 286 N 286



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 52/130 (40%), Gaps = 11/130 (8%)

Query: 313 SSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             ++V+E  R       +Y+   + S + +I+   +A+Y         D + +T +  E 
Sbjct: 74  GDRVVWEIIRNEGSNNDIYMYNVSTSKETQITTSGKANYPAIY----EDKVVWTDYRNEN 129

Query: 371 FAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             I +       + ++   +S    P     G  +I+   ++G     +Y  +++   ET
Sbjct: 130 NHIYMYNLSAERETQITTNESIKSGPEI--YGDRIIWIDDRNGKQ--DIYVYNISTTKET 185

Query: 430 LINTPAYASD 439
            I T   AS+
Sbjct: 186 QITTNGSASE 195



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 91/269 (33%), Gaps = 47/269 (17%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            +SI      +  RI+++ +       K  + V +        +T +     +    SP 
Sbjct: 148 NESIKSGPEIYGDRIIWIDDR----NGKQDIYVYNISTTKETQITTNGSASEYG---SPA 200

Query: 223 --QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
               ++ +    D +   +Y+ +   ++   RI    S    P     G R + +  ++ 
Sbjct: 201 IYGDRIVWQDERDGNS-DIYMYNLSTEKET-RITINESSQEDPAIY--GNRIVWTDYRNS 256

Query: 281 ----------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----SDREG-- 324
                       DIY  DL ++   ++T+               +IV+     SD+ G  
Sbjct: 257 KESSTFYMNSNSDIYMYDLSTSTETQITSNKSNQFRPEIY--GDRIVWVDERNSDKSGEF 314

Query: 325 ----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  +Y+   + S + +I+ ++    F  ++S   D I +         I +     
Sbjct: 315 YMNSNSDIYMYDLSTSTEIQITTNELDQDFPFLYS---DRIVWMDSRNLS-DIYMYNITN 370

Query: 381 SQERLLVEDSN--------LQAPTWSPSG 401
           S+E  +  + +          + +W+P  
Sbjct: 371 SKEIPITTNQSSQISEINVDISMSWNPDS 399


>gi|209525413|ref|ZP_03273953.1| WD-40 repeat protein [Arthrospira maxima CS-328]
 gi|209494093|gb|EDZ94408.1| WD-40 repeat protein [Arthrospira maxima CS-328]
          Length = 994

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 50/332 (15%), Positives = 102/332 (30%), Gaps = 48/332 (14%)

Query: 107 GAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
           G   +         V   G + L+    LWD++   ++       +  SW  +A  I+ D
Sbjct: 367 GVNAVAIAPDGKRAVSASGDETLK----LWDLETGTELA----TLTGHSWSVLAVAIAPD 418

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
                               +  VS     +L + D +              +     +P
Sbjct: 419 -------------------GKRAVSASWDKTLKLWDLETGTELATLTGHSSSVTAVAIAP 459

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + ++   A+ +      + L D         +      ++A   + +GKR  +S   DE 
Sbjct: 460 DGKRAVSASSNT-----LKLWDLETGTELATLTGHSGGVMAVAIAPDGKR-AVSASWDET 513

Query: 282 MDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + ++  DL++      LT         + +PD  + V  SD      L +       +  
Sbjct: 514 LKLW--DLETGTELATLTGHSSWVRGVAIAPDGKRAVSASD---DNTLKLWDLETGTELA 568

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                         +P G   A +    E   +  ++       L      + A   +P 
Sbjct: 569 TLTGHSGWVKAVAIAPDGKR-AVSASRDETLKLWDLETGRELATLTGHSREVWAVAIAPD 627

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           G+  + + +   D   KL+ ++      TL  
Sbjct: 628 GKRAVSASR---DYTLKLWDLETGTELATLTG 656



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 82/263 (31%), Gaps = 22/263 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +  VS     +L + D +            + +     +P+ ++   A+ D      + L
Sbjct: 168 KRAVSASNDKTLKLWDLETGTELATLTGHSRWVTAVAIAPDGKRAVSASDD----FTLKL 223

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNT 300
            D         +    S + A   + +GKR  +S   D  + ++  DL++      LT  
Sbjct: 224 WDLETGTELATLTGHSSWVTAVAIAPDGKR-AVSASDDNTLKLW--DLETGTELATLTGH 280

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                + + +PD  + V  SD    + L +       +                +P G  
Sbjct: 281 SDDVNAVAIAPDGKRAVSASD---DKTLKLWDLETGTELATLTGHSFPVTAVAIAPDGKR 337

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A +    +   +  ++       L      + A   +P G+    +    GD   KL+ 
Sbjct: 338 -AVSASEDKTLKLWDLETGTELATLTGHSGGVNAVAIAPDGKR---AVSASGDETLKLWD 393

Query: 421 IDLNGRNETLINTPAYASDPQWV 443
           ++      TL           W 
Sbjct: 394 LETGTELATLTGH-------SWS 409



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 88/274 (32%), Gaps = 17/274 (6%)

Query: 166 ITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           +TG  G  N+  +    +  VS     +L + D +              +     +P+ +
Sbjct: 361 LTGHSGGVNAVAIAPDGKRAVSASGDETLKLWDLETGTELATLTGHSWSVLAVAIAPDGK 420

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           +   A++D      + L D         +    S + A   + +GKRA+ +      +  
Sbjct: 421 RAVSASWDK----TLKLWDLETGTELATLTGHSSSVTAVAIAPDGKRAVSASSNTLKLW- 475

Query: 285 YSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
              DL++      LT      ++ + +PD  + V  S     E L +       +     
Sbjct: 476 ---DLETGTELATLTGHSGGVMAVAIAPDGKRAVSAS---WDETLKLWDLETGTELATLT 529

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
              +       +P G   A +        +  ++       L      ++A   +P G+ 
Sbjct: 530 GHSSWVRGVAIAPDGKR-AVSASDDNTLKLWDLETGTELATLTGHSGWVKAVAIAPDGKR 588

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            + + +   D   KL+ ++      TL       
Sbjct: 589 AVSASR---DETLKLWDLETGRELATLTGHSREV 619



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 45/319 (14%), Positives = 99/319 (31%), Gaps = 49/319 (15%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            V      +  V        +LWD++   ++         +  R +A  I+ D       
Sbjct: 495 AVAIAPDGKRAVSASWDETLKLWDLETGTELA--TLTGHSSWVRGVA--IAPD------- 543

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                        +  VS    N+L + D +              +     +P+ ++   
Sbjct: 544 ------------GKRAVSASDDNTLKLWDLETGTELATLTGHSGWVKAVAIAPDGKRAVS 591

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           A+ D+     + L D    R    +      + A   + +GKR  +S  +D  + ++  D
Sbjct: 592 ASRDE----TLKLWDLETGRELATLTGHSREVWAVAIAPDGKR-AVSASRDYTLKLW--D 644

Query: 289 LQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           L++      LT       + + +PD  + V  S       L +       +         
Sbjct: 645 LETGTELATLTGHSNEVYAVAIAPDGKRAVSASR---DYTLKLWDLETGTELATLTGHSG 701

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIF 406
             +    +P G       F      + +   +  +E      ++ + +   +P G ++  
Sbjct: 702 LVWAVAIAPDGKRAVSASFDKT---LKLWDLETGKELATFTGEARMLSCAVAPDGVTVA- 757

Query: 407 SRKKDGDTGSKLYSIDLNG 425
                GD    ++ + L G
Sbjct: 758 ----AGDDAGVVHFLRLEG 772



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 61/187 (32%), Gaps = 11/187 (5%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINI 305
               + +      + A   + +GKR  +S   D+ + ++  DL++      LT       
Sbjct: 145 GPLIRTLTGHSDWVNAVAIAPDGKR-AVSASNDKTLKLW--DLETGTELATLTGHSRWVT 201

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + + +PD  + V  SD      L +       +        +       +P G   A + 
Sbjct: 202 AVAIAPDGKRAVSASD---DFTLKLWDLETGTELATLTGHSSWVTAVAIAPDGKR-AVSA 257

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                  +  ++       L     ++ A   +P G+  + +     D   KL+ ++   
Sbjct: 258 SDDNTLKLWDLETGTELATLTGHSDDVNAVAIAPDGKRAVSASD---DKTLKLWDLETGT 314

Query: 426 RNETLIN 432
              TL  
Sbjct: 315 ELATLTG 321



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 32/106 (30%), Gaps = 4/106 (3%)

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             G    R              +P G   A +  + +   +  ++       L      +
Sbjct: 142 PPGGPLIRTLTGHSDWVNAVAIAPDGKR-AVSASNDKTLKLWDLETGTELATLTGHSRWV 200

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            A   +P G+  + +     D   KL+ ++      TL    ++ +
Sbjct: 201 TAVAIAPDGKRAVSASD---DFTLKLWDLETGTELATLTGHSSWVT 243


>gi|326428934|gb|EGD74504.1| mycorrhiza-induced NACHT/WD40-repeat domain-containing protein
           [Salpingoeca sp. ATCC 50818]
          Length = 1095

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 58/329 (17%), Positives = 112/329 (34%), Gaps = 49/329 (14%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           +V+G     G +   V  R+WD +  +Q+            +   HT  D ++       
Sbjct: 543 VVSGSGSPFGTEDKTV--RVWDARTGEQLT-----------QCEGHT--DRVFSVGFSPD 587

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G            VVSG I  ++ V D           +    +    FSP+  +V   +
Sbjct: 588 G----------TRVVSGSIDATVRVWDARTGEQLTQCEAHTSGVTSVGFSPDGTRVVSGS 637

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +D      V + D +      +       + +  FS +G R ++S   D+ + ++  D +
Sbjct: 638 WDK----TVRVWDAQTGEQLTQCDGHTESVTSVGFSPDGTR-VVSGSWDKTVRVW--DAR 690

Query: 291 SNATERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +   E+LT          S  +SPD +++V  S       + V  +   +Q    +    
Sbjct: 691 TG--EQLTQCDGHTHWVFSVGFSPDGTRVVSGSY---DATVRVWDAQTGEQLTQCEGHTG 745

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
                 +SP G  +           + V      ++  L E    +  +  +SP G  ++
Sbjct: 746 FVNSVGFSPDGTRVVSGSLDET---VRVWDARTGEQLTLCEGHTREVTSVGFSPDGTRVV 802

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                     ++ Y+    G   T   TP
Sbjct: 803 ----SGSCDKTQTYAYKPEGLLPTPDPTP 827



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 71/210 (33%), Gaps = 18/210 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI--LRVYLMDTRIDRAPKRIGNFRSMI 260
            + +       +    FSP+  +V   +          V + D R      +       +
Sbjct: 520 CKLVITGHSSEVTSVGFSPDGTRVVSGSGSPFGTEDKTVRVWDARTGEQLTQCEGHTDRV 579

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIV 317
            +  FS +G R ++S   D  + ++  D ++   E+LT          S  +SPD +++V
Sbjct: 580 FSVGFSPDGTR-VVSGSIDATVRVW--DARTG--EQLTQCEAHTSGVTSVGFSPDGTRVV 634

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S     + + V  +   +Q         S     +SP G  +    +      + V  
Sbjct: 635 SGS---WDKTVRVWDAQTGEQLTQCDGHTESVTSVGFSPDGTRVVSGSWDKT---VRVWD 688

Query: 378 KDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
               ++    +       +  +SP G  ++
Sbjct: 689 ARTGEQLTQCDGHTHWVFSVGFSPDGTRVV 718


>gi|56460919|ref|YP_156200.1| HTH/TolB-like domain-containing protein [Idiomarina loihiensis
           L2TR]
 gi|56179929|gb|AAV82651.1| N-terminal winged-HTH domain fused to TolB-like domain [Idiomarina
           loihiensis L2TR]
          Length = 665

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 61/267 (22%), Positives = 116/267 (43%), Gaps = 21/267 (7%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           DF+   +    +      K +L   D+DG + I  L+ S D        + N+ +   A 
Sbjct: 294 DFDETFVPYEINFHKVQNKLALAGFDQDGVSKIFSLSLSSDVEALSEIIALNKNRYFLAW 353

Query: 231 YDDEDILRV----YLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRALISVQKDEAMDI 284
           + + + + +     L    +D +  RI N+ S      P+F+ +G + L S+ K +  DI
Sbjct: 354 HPNGEAMVISDGRLLSKVWMDGSSSRI-NYDSYDFVQHPQFTPSGDQILFSLAKID-TDI 411

Query: 285 YSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
             + L SN    +L N+  ++   S SPD S++ F S R+G  Q+YV+  N  + + + +
Sbjct: 412 EQMSLTSNDQVTKLVNSNTVDREPSLSPDKSKLAFISQRKGFPQVYVLDLNTQEIQLVYE 471

Query: 344 DKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGV-MKKDGSQERLLVEDSNLQAPTWSPS 400
           +KE       PVW+   + + F+ +    F I +  + D    + L     +    + P+
Sbjct: 472 NKERLLGVSRPVWNANNNRLGFSNYD---FPIIISAENDKYSVKQLTAPHGVLV-DFYPN 527

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              ++   +K      +L +IDL    
Sbjct: 528 NEKVLTLARKSN----QLSTIDLATEK 550



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 60/146 (41%), Gaps = 13/146 (8%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASY 349
               +T+T  +  +A  SPD + + F       EG   L+V      +++ I    + + 
Sbjct: 153 EATPITSTEALEFNAKISPDGAMVAFLRIAETGEGNRALWVKDIATDEEQLIV---DGNV 209

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG----SQERLLVEDSNLQAPTWSPSGRSLI 405
            +  WS + D +AFT FS +   I  +  +     +     V +  + +  W       I
Sbjct: 210 LEFDWSTEADALAFTIFSNKSEQIQTVNLNTLNIYNSIASFVNEKRISSMHWGRDNN--I 267

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLI 431
           ++  K+    S L +I+LN   ++ I
Sbjct: 268 YTLTKENGLVS-LMAINLNSGKKSKI 292



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/214 (9%), Positives = 63/214 (29%), Gaps = 10/214 (4%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGA--NIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           R++ +   V+S   +  +    + G   N +    +  +  F+ R       +       
Sbjct: 78  RVITILRKVLSKDNQELIKTFPKKGYSLNAKIRLENHTKTSFKKRACWALSIIPIIVLLF 137

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---SVQKDEAMDIYSVDLQ 290
              +      T        I +  ++    + S +G        +   +    ++  D+ 
Sbjct: 138 AFTVTTETDSTFTVHEATPITSTEALEFNAKISPDGAMVAFLRIAETGEGNRALWVKDIA 197

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--ISQDKEAS 348
           ++  + + +     +   +S ++  + F       EQ+  +  N  +      S   E  
Sbjct: 198 TDEEQLIVD--GNVLEFDWSTEADALAFTIFSNKSEQIQTVNLNTLNIYNSIASFVNEKR 255

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                W    + I          ++  +  +  +
Sbjct: 256 ISSMHWGRDNN-IYTLTKENGLVSLMAINLNSGK 288


>gi|73670309|ref|YP_306324.1| hypothetical protein Mbar_A2844 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397471|gb|AAZ71744.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 1001

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 64/173 (36%), Gaps = 17/173 (9%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R + S  ++   DIY+ DL ++   ++T     + S        +IV+   R G   +Y
Sbjct: 630 DRIVWSDNRNGNPDIYTYDLSTSMETQITTIKSYDYSPEIY--GDRIVWTDYRNGNGDIY 687

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQE 383
           +   +   + +I+ ++ AS          D I +  +            I +       E
Sbjct: 688 LYNLSTKKETQITTNESASNPKIY----EDKIIWVDYRNGDIQNFSNPDIFMYDLSTHNE 743

Query: 384 RLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +   ++     +SP   G  +++  K+     S +Y  DL+    T I T 
Sbjct: 744 TQISSSASDD---FSPDIYGDRIVWCAKRHESENSSIYMYDLSTSKNTKITTN 793



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 98/288 (34%), Gaps = 40/288 (13%)

Query: 162 IYQSITGEKGDFNS--RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           +  ++   KG F+    I       V G +  +   +  +G N       +D+I+    +
Sbjct: 579 VNLTVGNSKGSFSKLFPITVSPVRRVDGQLILTEYQITTNGVNPSRPAIYKDRIV----W 634

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S N+               +Y  D       + I   +S   +P     G R + +  ++
Sbjct: 635 SDNRN----------GNPDIYTYDLSTSMETQ-ITTIKSYDYSPEIY--GDRIVWTDYRN 681

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG------KEQLYVMQS 333
              DIY  +L +    ++T       +     D  +I++   R G         +++   
Sbjct: 682 GNGDIYLYNLSTKKETQITTNESA-SNPKIYED--KIIWVDYRNGDIQNFSNPDIFMYDL 738

Query: 334 NGSDQKRISQDKEASYFDPVWSPQ--GDLIAFT--KFSGEKFAIGVMKKDGS-QERLLVE 388
           +  ++ +IS     S     +SP   GD I +   +   E  +I +     S   ++   
Sbjct: 739 STHNETQIS-----SSASDDFSPDIYGDRIVWCAKRHESENSSIYMYDLSTSKNTKITTN 793

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           +S    P     G  +I+    +      +Y++  +   +   +   Y
Sbjct: 794 ESQHMNPVI--YGDRIIWEDYLNEKRSIHIYNLSTSTETQIATSQSGY 839



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 93/270 (34%), Gaps = 36/270 (13%)

Query: 172 DFNSRILFVSESVVS--GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN--QQKVA 227
            +  +I++V              + + D    N   ++ S         FSP+    ++ 
Sbjct: 710 IYEDKIIWVDYRNGDIQNFSNPDIFMYDLSTHNETQISSSASDD-----FSPDIYGDRIV 764

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +     E       M         +I    S  + P     G R +     +E   I+  
Sbjct: 765 WCAKRHESENSSIYMYDLSTSKNTKITTNESQHMNPVIY--GDRIIWEDYLNEKRSIHIY 822

Query: 288 DLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +L ++   ++ T+    +  A Y    +++++   R G   +Y+   +   + RI+ +  
Sbjct: 823 NLSTSTETQIATSQSGYHWPAIY---ENRVLWADYRNGHIDIYMYDLSTQKETRITTNGL 879

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWS--PSG 401
           +     ++   GD + +T     K  I +         ++ E+  +     P +S  P+ 
Sbjct: 880 SFAESAIY---GDKVVWTGNINGKSNIYMC--------IISEEGKIPEPPIPDFSAFPTS 928

Query: 402 R----SLIFSRKKDGDTGSKLYSIDLNGRN 427
                 ++F+    G   S L+    +G N
Sbjct: 929 GGAPLKVLFTDNSTGGPTSWLWDF-GDGIN 957



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 43/104 (41%), Gaps = 10/104 (9%)

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           +I+ +        ++    D I ++        I       S E  +     +++  +SP
Sbjct: 614 QITTNGVNPSRPAIY---KDRIVWSDNRNGNPDIYTYDLSTSMETQITT---IKSYDYSP 667

Query: 400 --SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              G  ++++  ++G     +Y  +L+ + ET I T   AS+P+
Sbjct: 668 EIYGDRIVWTDYRNG--NGDIYLYNLSTKKETQITTNESASNPK 709


>gi|328949374|ref|YP_004366711.1| hypothetical protein Tresu_2552 [Treponema succinifaciens DSM 2489]
 gi|328449698|gb|AEB15414.1| hypothetical protein Tresu_2552 [Treponema succinifaciens DSM 2489]
          Length = 329

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 94/266 (35%), Gaps = 50/266 (18%)

Query: 218 RFSPNQQKVAYATYDDE-----------DILRVYLMDTRIDRAPKRIGNFR-SMILA--P 263
             SP+  ++ Y   D             D +  Y     + R   R       +  +  P
Sbjct: 52  AVSPDGNQLLYVEIDKSVNSYITNMKVSDDIYYYSSQMYLLRDISRPSKTPLGLTFSYWP 111

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESD 321
            ++ NGK  + +  ++    +   +++      +T T     +I        + I+ ++ 
Sbjct: 112 AWNKNGKEFVFASLENNQFKLVRANIEGGRKTYITRTPIGSEDIRPDI--KDNIILCQTK 169

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             GK Q+  +  +G++   I +      + P W P+ +   F +  G    I  M  D +
Sbjct: 170 INGKNQIVTLNYDGTEITLICEG-----YSPSWHPRENKFVFIRDGG----IFEMDLDLN 220

Query: 382 QERLLVEDSNLQA--PTWSPSGRSLIFS--------------------RKKDGDTGSKLY 419
           Q   + +D +     P++S  G+ ++FS                       +  T   LY
Sbjct: 221 QATEIYKDVDFPCYKPSYSKDGKYILFSQLTPVNTKGSMISSLSKRIISIANSRTNIHLY 280

Query: 420 SIDLNGRNETLINTPA-YASDPQWVG 444
            I  +G N+T + + A  A  P W  
Sbjct: 281 LISSDGMNKTQLTSGAVDAYTPVWGA 306



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 52/164 (31%), Gaps = 33/164 (20%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             KN +  ++ DG  I  +        + P + P + K  +          ++ MD  ++
Sbjct: 171 NGKNQIVTLNYDGTEITLICEG-----YSPSWHPRENKFVFIRDGG-----IFEMDLDLN 220

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALIS----------------------VQKDEAMDIY 285
           +A +   +       P +S +GK  L S                            + +Y
Sbjct: 221 QATEIYKDVDFPCYKPSYSKDGKYILFSQLTPVNTKGSMISSLSKRIISIANSRTNIHLY 280

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +        +LT+      +  +  D++   F S    K  ++
Sbjct: 281 LISSDGMNKTQLTSGAVDAYTPVWGADNTIF-FISAANNKTDIW 323


>gi|166368208|ref|YP_001660481.1| WD repeat-containing protein [Microcystis aeruginosa NIES-843]
 gi|166090581|dbj|BAG05289.1| WD-repeat protein [Microcystis aeruginosa NIES-843]
          Length = 1583

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 84/220 (38%), Gaps = 22/220 (10%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                  +++    FSP+ Q +A  ++D      V L   R       +      +    F
Sbjct: 1176 TLTGHSEVIAGVAFSPDSQTLASGSWDK----TVKLWK-RDGTLIATLSGHSDRVWGVTF 1230

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S +G+    S   D+ + ++   L+S    RLT    + I  ++SPD   I   SD    
Sbjct: 1231 SPDGQTIA-SASDDKTVKLWR--LKSPLLTRLTGHSGVVIGVAFSPDGQTIASTSD---D 1284

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            + + + Q +G+    +S    A  +   +SP G  +A          + +      + RL
Sbjct: 1285 KTVKLWQRDGTLLATLS-GHTAQVYGVAFSPDGQRLASASADNT---VKLWNLGRGKPRL 1340

Query: 386  LVEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSI 421
            L      QA  W    SP G+++  +     D   KL+++
Sbjct: 1341 LATLRGHQAVVWEVAFSPDGQTVASAAW---DNTVKLWNV 1377



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 79/203 (38%), Gaps = 13/203 (6%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +++E  FSP+ Q VA A +D  + ++++ +  +  +    +   ++ +L   F
Sbjct: 1343 TLRGHQAVVWEVAFSPDGQTVASAAWD--NTVKLWNVGQKTPQLLATLRGHQAAVLGVAF 1400

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDRE 323
            S +G+    S   D  + ++ V         + L          ++SPD   I   S   
Sbjct: 1401 SPDGQTIA-STSADNTVKLWRVKPDQVPVLLKTLIGHTAQVYGLAFSPDGQTIASAS--- 1456

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                + + + +G+    + +   A  F   +SP G  IA   +      I + K DG+  
Sbjct: 1457 ADNTIKLWKLDGTLLTTL-KGHSAVVFSVAFSPDGQTIASASWDKT---IKLWKPDGTLL 1512

Query: 384  RLLVE-DSNLQAPTWSPSGRSLI 405
              L        +  +SP G+++ 
Sbjct: 1513 TTLNGYSGRFWSIAFSPDGQTIA 1535



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 106/290 (36%), Gaps = 32/290 (11%)

Query: 163  YQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            Y  ++ ++ +  S       ++ VS      + +  RDG  I  L    D+I ++  FSP
Sbjct: 961  YNRLSLDRDEVKSVAFSPDGNILVSAGRDKIIKLWKRDGTLIATLNGHSDRI-WQAVFSP 1019

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAP---KRIGNFRSMILAPRFSSNGKRALISVQK 278
            +   +A  + D      + L      + P   K +   R  +    FS +G+    S   
Sbjct: 1020 DGHTIASGSTDK----TIKLWKLEAGKTPVLLKTLVGHRDGVRGVAFSPDGQMLA-SASD 1074

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D+ + I+  D        L     +    ++SPD   +   SD    + + + + +G+  
Sbjct: 1075 DKTVKIWKQD--GTLIATLAGHTAVVNGVAFSPDGQILASASD---DKTVKLWKRDGTLI 1129

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQA-- 394
              ++   +       +SP G ++A   +      I + K +  +   L      + +   
Sbjct: 1130 TTLTGHTD-IVNGVAFSPDGQMLASASWDKT---IKLWKLETGKMPALLATLTGHSEVIA 1185

Query: 395  -PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
               +SP  ++L        D   KL+  D      TLI T +  SD  W 
Sbjct: 1186 GVAFSPDSQTLA---SGSWDKTVKLWKRDG-----TLIATLSGHSDRVWG 1227



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 56/151 (37%), Gaps = 7/151 (4%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            D + I      ++   WR     +   +   I      +        +++ S    N++ 
Sbjct: 1403 DGQTIASTSADNTVKLWRVKPDQVPVLLKTLIGHTAQVYGLAFSPDGQTIASASADNTIK 1462

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            +   DG  +         ++F   FSP+ Q +A A++D    ++++  D         + 
Sbjct: 1463 LWKLDGT-LLTTLKGHSAVVFSVAFSPDGQTIASASWD--KTIKLWKPD---GTLLTTLN 1516

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             +     +  FS +G+    S  +D+ + ++
Sbjct: 1517 GYSGRFWSIAFSPDGQTIA-SANEDKTVILW 1546


>gi|145533739|ref|XP_001452614.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124420313|emb|CAK85217.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1060

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 104/302 (34%), Gaps = 36/302 (11%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    RLWDV   +Q                 H   D +Y       G        
Sbjct: 256 ASGSTDHSIRLWDVTTGQQKAKLD-----------GHN--DSVYSICFSPHG-------- 294

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +  SG    S+ + D    ++          +    FSP+   +A  + D      +
Sbjct: 295 --STFASGSGDCSIRLWDVKTVSLIATINGHSNQVLSVCFSPDGITLASGSADH----FI 348

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L + +  +   ++    S + +  FS +G   L S   DE++ ++ V     A ++  +
Sbjct: 349 CLWNIKTGQQNAKLDGHTSGVSSVCFSHDGT-ILASGSSDESIRLWDVKTCQQAAKQDGH 407

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +  +N S  +SPD S     S       + +   +   QK              +SP G 
Sbjct: 408 SDSVN-SICFSPDGSTFASGSS---DSSICLWDIDTGKQKAKLSGHTNCVNSVCFSPDGS 463

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +A +  + +  ++  +K    + +L+   + +++  +SP G  +       GD   +L+
Sbjct: 464 TLA-SGSNDDFISLWDIKTGQQKAKLIGHTNFIKSVCFSPDGTIIA---SGSGDCSIRLW 519

Query: 420 SI 421
            +
Sbjct: 520 DV 521



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 108/334 (32%), Gaps = 42/334 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  +Q   +             H  SD +        G     
Sbjct: 379 TILASGSSDESIRLWDVKTCQQAAKQD-----------GH--SDSVNSICFSPDG----- 420

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 +  SG   +S+C+ D D    +         +    FSP+   +A  + DD   
Sbjct: 421 -----STFASGSSDSSICLWDIDTGKQKAKLSGHTNCVNSVCFSPDGSTLASGSNDD--- 472

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D +  +   ++    + I +  FS +G              I   D+++   + 
Sbjct: 473 -FISLWDIKTGQQKAKLIGHTNFIKSVCFSPDGTIIA---SGSGDCSIRLWDVKTGCQKA 528

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L   +    S  +SP   ++V  S  +G  +L+        QK I ++         +S
Sbjct: 529 KLDGHIMCVNSLYFSPYGFKLVSGS-ADGSIRLW--DVKTECQKVILENVGICVHSVCYS 585

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGD 413
           PQG    F   S + F I +      Q    +    +   T  +S  G  L+       D
Sbjct: 586 PQGT--TFASGSEDSF-IRLWNAKTGQLNAKLYGHRMSVYTVYFSLDGFVLV---SGSAD 639

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
              +L+++        L       +   +  +++
Sbjct: 640 YSIRLWNVGTQSLIARLDGHSNCVNSVCFSPYVN 673



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 80/246 (32%), Gaps = 18/246 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G +  S+ + D  G   +        I+    FSPN   +A  ++D      + L D   
Sbjct: 720 GSLDCSIRLCDITGK-QKAQFNGHTWIVASLCFSPNGTTLASGSWDK----TIRLWDLLQ 774

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                ++      + +  FS +G     S   D+++ +++V  +      L        S
Sbjct: 775 GLEKAKLDGHSDYVSSVCFSQDGNTLA-SGSYDKSIRLWNVKARQQKAI-LFGHQDAVQS 832

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +  D   +V  S       + +       Q +     + S      SP G ++A    
Sbjct: 833 VCFLSDGITLVSGST---DHTIRLWDVKTGQQNKQLNGHDDSVQSVCLSPDGSILA---S 886

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            G  + I +      Q++  +   N       +SP   +L        D   +L+ +   
Sbjct: 887 GGGDYTICLWDVQRGQQKAKLNGHNNCVNQVCFSPDANTLASCSY---DATIRLWDVKTG 943

Query: 425 GRNETL 430
            +   L
Sbjct: 944 QQKAKL 949



 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 78/244 (31%), Gaps = 21/244 (8%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ SG    ++ + D      +         +    FS +   +A  +YD      + L 
Sbjct: 757 TLASGSWDKTIRLWDLLQGLEKAKLDGHSDYVSSVCFSQDGNTLASGSYDK----SIRLW 812

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTL 301
           + +  +    +   +  + +  F S+G   + S   D  + ++  D+++    ++L    
Sbjct: 813 NVKARQQKAILFGHQDAVQSVCFLSDGITLV-SGSTDHTIRLW--DVKTGQQNKQLNGHD 869

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S   SPD S +       G   + +       QK              +SP  + +
Sbjct: 870 DSVQSVCLSPDGSILA---SGGGDYTICLWDVQRGQQKAKLNGHNNCVNQVCFSPDANTL 926

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLY 419
           A   +      I +      Q++  +        +  +   G  L       G     +Y
Sbjct: 927 ASCSYDAT---IRLWDVKTGQQKAKLNCYFHCVYSVCFLSDGFKLA-----SGGNKDNIY 978

Query: 420 SIDL 423
            +D+
Sbjct: 979 ILDI 982



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 93/303 (30%), Gaps = 37/303 (12%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLW+ K   Q+  K +           H +S  +Y       G             VSG
Sbjct: 600 IRLWNAKTG-QLNAKLY----------GHRMS--VYTVYFSLDGFVL----------VSG 636

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               S+ + +    ++          +    FSP     A  + D+     + L   RI 
Sbjct: 637 SADYSIRLWNVGTQSLIARLDGHSNCVNSVCFSPYVNIFATCSKDN----SIRLYQYRIK 692

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  K +      I +   S +G              I   D+      +     +I  S 
Sbjct: 693 KLKKILTQNDETIRSVCLSPDGITLAF---GSLDCSIRLCDITGKQKAQFNGHTWIVASL 749

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SP+ + +   S     + + +       +K              +S  G+ +A   + 
Sbjct: 750 CFSPNGTTLASGS---WDKTIRLWDLLQGLEKAKLDGHSDYVSSVCFSQDGNTLASGSYD 806

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            +   +  +K    +  L      +Q+  +   G +L+       D   +L+ +    +N
Sbjct: 807 -KSIRLWNVKARQQKAILFGHQDAVQSVCFLSDGITLVSGST---DHTIRLWDVKTGQQN 862

Query: 428 ETL 430
           + L
Sbjct: 863 KQL 865



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 67/217 (30%), Gaps = 40/217 (18%)

Query: 120 GKDRLRVEFRLWDVKDRKQ---IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                    RLW+VK R+Q   + G +                D +        G     
Sbjct: 801 ASGSYDKSIRLWNVKARQQKAILFGHQ----------------DAVQSVCFLSDGI---- 840

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++VSG   +++ + D             D  +     SP+   +A         
Sbjct: 841 ------TLVSGSTDHTIRLWDVKTGQQNKQLNGHDDSVQSVCLSPDGSILA----SGGGD 890

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D +  +   ++    + +    FS +      S   D  + ++  D+++   + 
Sbjct: 891 YTICLWDVQRGQQKAKLNGHNNCVNQVCFSPDANTLA-SCSYDATIRLW--DVKTGQQKA 947

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +L        S  +  D  ++        K+ +Y++ 
Sbjct: 948 KLNCYFHCVYSVCFLSDGFKLA---SGGNKDNIYILD 981



 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 58/164 (35%), Gaps = 30/164 (18%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWDVK  +Q   K+      S + +  +    I                       SG
Sbjct: 851 IRLWDVKTGQQ--NKQLNGHDDSVQSVCLSPDGSIL---------------------ASG 887

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               ++C+ D      +      +  + +  FSP+   +A  +YD      + L D +  
Sbjct: 888 GGDYTICLWDVQRGQQKAKLNGHNNCVNQVCFSPDANTLASCSYD----ATIRLWDVKTG 943

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           +   ++  +   + +  F S+G +           +IY +D+++
Sbjct: 944 QQKAKLNCYFHCVYSVCFLSDGFKLA---SGGNKDNIYILDIKT 984


>gi|297561228|ref|YP_003680202.1| acylaminoacyl-peptidase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296845676|gb|ADH67696.1| Acylaminoacyl-peptidase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 632

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 75/209 (35%), Gaps = 13/209 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYL-----MDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  SP+ ++  +A    +     YL     + T     P R+         P FS +G+ 
Sbjct: 15  PTLSPDSRRAVFAVTRPDLEEDAYLGSLWSVPTDGSAPPARLTRGTRDN-GPVFSPDGRW 73

Query: 272 ALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                  +D+   ++ +        ++T+      +  +SPDS++I + + R  +   YV
Sbjct: 74  IAFLRPDEDKRPQVHVLPADGGEPWKVTSHPLGAGAPRWSPDSTRIAYTA-RVPEPHRYV 132

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +  G +  R     +    D  ++       F     +        + G   ++   D 
Sbjct: 133 DREPGKEPPRRITQLKYRLDDLGFANDRRTHVFVSAPLDPSG-----EAGEPVQVTRGDF 187

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             ++ +W P G  L+F+  +     + L 
Sbjct: 188 EHRSVSWRPDGTELVFAAARHATRDTDLV 216



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 100/304 (32%), Gaps = 33/304 (10%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
            IAH  S     + T       +        +       SL  +  DG+        R  
Sbjct: 5   DIAHLHS---IGAPTLSPDSRRAVFAVTRPDLEEDAYLGSLWSVPTDGSAPPARLT-RGT 60

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
               P FSP+ + +A+   D++   +V+++       P ++ +      APR+S +  R 
Sbjct: 61  RDNGPVFSPDGRWIAFLRPDEDKRPQVHVLPAD-GGEPWKVTSHPLGAGAPRWSPDSTRI 119

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGKEQLY 329
             + +  E       +       R+T   +      ++ D    VF S   D  G     
Sbjct: 120 AYTARVPEPHRYVDREPGKEPPRRITQLKYRLDDLGFANDRRTHVFVSAPLDPSG----- 174

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQE 383
                  +  ++++  +  +    W P G  + F      T+ +     +     +   E
Sbjct: 175 ----EAGEPVQVTR-GDFEHRSVSWRPDGTELVFAAARHATRDTDLVEDLWACAPEEGAE 229

Query: 384 RLLVEDSNLQAPT--WSPSGRSLIFSRKKDGD-------TGSKLYSIDLNGRNETLINTP 434
              V   NL A    +S  G ++ F   + G          S L+S+  +     +  TP
Sbjct: 230 PRRVTAGNLDAVRGEFSEDGATVYFLGDELGPDLDDFVGQTSALWSVPADASAAPVRLTP 289

Query: 435 AYAS 438
           ++  
Sbjct: 290 SHNP 293



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 95/289 (32%), Gaps = 35/289 (12%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F+    +++        +  + V+  DG    +   S       PR+SP+  ++AY   
Sbjct: 66  VFSPDGRWIAFLRPDEDKRPQVHVLPADGGEP-WKVTSHPLGAGAPRWSPDSTRIAYTAR 124

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
             E     Y+        P+RI   +  +    F+++ +  +             +D   
Sbjct: 125 VPE--PHRYVDREPGKEPPRRITQLKYRLDDLGFANDRRTHVFVSAP--------LDPSG 174

Query: 292 --NATERLTNTLFINISASYSPDSSQIVFESDREGK------EQLYVMQSNGSDQKRISQ 343
                 ++T   F + S S+ PD +++VF + R         E L+        + R   
Sbjct: 175 EAGEPVQVTRGDFEHRSVSWRPDGTELVFAAARHATRDTDLVEDLWACAPEEGAEPRRVT 234

Query: 344 DKEASYFDPVWSPQGDLIAFT---------KFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                     +S  G  + F           F G+  A+  +  D S   + +  S+   
Sbjct: 235 AGNLDAVRGEFSEDGATVYFLGDELGPDLDDFVGQTSALWSVPADASAAPVRLTPSHN-- 292

Query: 395 PTWSP----SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           P  +     +G+ L+   +  G     L      G  ET++  P     
Sbjct: 293 PRMAGGPKVTGQGLLGLAENRGAVDLVLVPF-GGGEPETVLGGPVQVQS 340



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 11/64 (17%)

Query: 394 APTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNG-------RNETLINTPAYASDPQW 442
           APT SP  R  +F+  +    +      L+S+  +G          T  N P ++ D +W
Sbjct: 14  APTLSPDSRRAVFAVTRPDLEEDAYLGSLWSVPTDGSAPPARLTRGTRDNGPVFSPDGRW 73

Query: 443 VGFM 446
           + F+
Sbjct: 74  IAFL 77


>gi|158337416|ref|YP_001518591.1| WD-40 repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158307657|gb|ABW29274.1| WD-40 repeat protein [Acaryochloris marina MBIC11017]
          Length = 1128

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 60/329 (18%), Positives = 111/329 (33%), Gaps = 48/329 (14%)

Query: 112  VTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIA------HTIS 159
            V   V      +L          RLWD K    I GK F     +   +A      H +S
Sbjct: 716  VVESVAFSPDGQLIASNSSDKTMRLWDAKTGDPI-GKPFKGHEDTVMSVAFSPDGQHIVS 774

Query: 160  ---DDIYQSITGEKG-----------DFNSRILFVS--ESVVSGIIKNSLCVMDR-DGAN 202
               D   +    E G           DF   + F    + + SG    ++ V D   G  
Sbjct: 775  GSYDKTVRLWDTETGSSISKPLKGHEDFVRSVAFSPDGQHIASGSRDKTIRVWDAKTGEI 834

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            I       +  +    FSP+ Q +A  ++D    +RV+   T  +   K +    S +++
Sbjct: 835  IGKPLKGHEDFVRSVAFSPDGQHIASGSWD--KTIRVWDAKTG-EIIGKPLKGHESAVMS 891

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFES 320
              FS +G+    S   D  + ++  + ++     + L     +  + ++SPD   IV  S
Sbjct: 892  VAFSPDGQHIA-SGSNDNTVRLW--NAKTGDPVGKPLKGHKSLVRTVTFSPDGQHIVSGS 948

Query: 321  DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               G + L +  +   D      +  +       +SP    I  +        I      
Sbjct: 949  ---GDKTLRLWDAKTGDPVGKPLRGHKLPVMSVAFSPDSQRIVSSS---GDRTIRFWDAK 1002

Query: 380  GSQER---LLVEDSNLQAPTWSPSGRSLI 405
                    L   + ++ +  +SP  + ++
Sbjct: 1003 TGDPIGKPLRGHELSIMSVAFSPDSQRIV 1031



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 118/305 (38%), Gaps = 26/305 (8%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           ++GA     G V+  G       F L+  +  ++   K+  ++  +  +        I  
Sbjct: 534 AIGAS---IGSVLMAG----TAIFALFQTQSAQRQRVKQLATNSKALAES--QPVQAIIN 584

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           +I  ++   ++ + F        +  + L  +  +    +++  S    +    FSP+ Q
Sbjct: 585 AIAAKRLSQSAFVQFPDRPQFDFVDDSLLTAVLANRERNQFIHKSS---VMSVAFSPDGQ 641

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +   + D  + ++++   T  D   K +   +S +++  FS +G+  + S   D+ + +
Sbjct: 642 HIVSGSGD--NTVQIWNAKTG-DLIGKPLKGHKSYVMSVAFSPDGQHIV-SGSYDKTVRL 697

Query: 285 YSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRI 341
           +  D ++ A   + L     +  S ++SPD   I   S     + + +  +   D   + 
Sbjct: 698 W--DAKTGAPIGKPLKGHKSVVESVAFSPDGQLIASNSS---DKTMRLWDAKTGDPIGKP 752

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPS 400
            +  E +     +SP G  I    +  +   +   +   S  + L    +  ++  +SP 
Sbjct: 753 FKGHEDTVMSVAFSPDGQHIVSGSYD-KTVRLWDTETGSSISKPLKGHEDFVRSVAFSPD 811

Query: 401 GRSLI 405
           G+ + 
Sbjct: 812 GQHIA 816



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 67/186 (36%), Gaps = 36/186 (19%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      +  V        RLWD K    + GK           ++   S D       
Sbjct: 934  TVTFSPDGQHIVSGSGDKTLRLWDAKTGDPV-GKPLRGH--KLPVMSVAFSPD------- 983

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                        S+ +VS     ++   D   G  I       +  +    FSP+ Q++ 
Sbjct: 984  ------------SQRIVSSSGDRTIRFWDAKTGDPIGKPLRGHELSIMSVAFSPDSQRIV 1031

Query: 228  YATYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
              ++D      + L D +      K +    S +++  FS +G+R  IS   D+++ I++
Sbjct: 1032 SGSWDK----TIRLWDAKTGDLIGKPLKGHESSVMSVAFSLDGQRI-ISSSDDKSVRIWN 1086

Query: 287  V-DLQS 291
            + DL+S
Sbjct: 1087 ISDLKS 1092


>gi|254881960|ref|ZP_05254670.1| prolyl oligopeptidase [Bacteroides sp. 4_3_47FAA]
 gi|319641035|ref|ZP_07995740.1| prolyl oligopeptidase [Bacteroides sp. 3_1_40A]
 gi|254834753|gb|EET15062.1| prolyl oligopeptidase [Bacteroides sp. 4_3_47FAA]
 gi|317387345|gb|EFV68219.1| prolyl oligopeptidase [Bacteroides sp. 3_1_40A]
          Length = 706

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 72/245 (29%), Gaps = 56/245 (22%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------IY 285
             E I+    +  +  R           I +   S +GK+   +V      +      IY
Sbjct: 28  GYEPIIGKQEITIKDGRLTPEALWAMGRIGSLSISPDGKQIAYTVAYYSVPENKSHHVIY 87

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            +D        LT T +      +    ++I F  +  G  Q++ M  +G++ +RI  D 
Sbjct: 88  VMDADGKNNTLLTQTAWNESEPQWIKGGTKIAFLCNESGGSQIWEMNPDGTE-RRIISDF 146

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF---------------------------------A 372
           + +     +SP G  I F                                          
Sbjct: 147 KGNIEGFSFSPDGKKILFISQIKYGQRTVDLYPDLPKASGIIVNDLMYKHWDEWVESIPH 206

Query: 373 IGVMKKDG---SQERLLVEDSNLQAP----------TWSPSGRSLIFSRKKDGDTGSKLY 419
             +   DG        ++E    +AP           WS   + + ++ +K        Y
Sbjct: 207 PFIADFDGNMMGAATDIMEGEPFEAPMKPFGGIEQLAWSNDSKQIAYTSRKKQGLA---Y 263

Query: 420 SIDLN 424
           ++  +
Sbjct: 264 AVSTD 268



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 99/322 (30%), Gaps = 75/322 (23%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV      + + VMD DG N   L         EP++     K+A+   +     +++ 
Sbjct: 75  YSVPENKSHHVIYVMDADGKN-NTLLTQTAWNESEPQWIKGGTKIAFLCNESGGS-QIWE 132

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------------------------ 277
           M+       + I +F+  I    FS +GK+ L   Q                        
Sbjct: 133 MNPD-GTERRIISDFKGNIEGFSFSPDGKKILFISQIKYGQRTVDLYPDLPKASGIIVND 191

Query: 278 ---------KDEAMDIYSVDLQS---NATERLTNTLFINI---------SASYSPDSSQI 316
                     +     +  D       A   +                   ++S DS QI
Sbjct: 192 LMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFEAPMKPFGGIEQLAWSNDSKQI 251

Query: 317 VFESDR--------EGKEQLYVMQSNGSDQKRI----------SQDKEASYFDPVWSPQG 358
            + S +             +Y+          +          + + +    +P +SP G
Sbjct: 252 AYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEMKGYDTNPKFSPNG 311

Query: 359 DLIAFTKFSGEKFA-----IGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKD 411
             IA+     + +      + +   D  Q+  + E   S +    W+   +SL F     
Sbjct: 312 KYIAWQSMERDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDYCWNNDSQSLYFVGVWH 371

Query: 412 GDTGSKLYSIDLNGRNETLINT 433
           G   S +YS +LNG  + L + 
Sbjct: 372 GT--SMVYSANLNGDIKKLTDG 391



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 85/287 (29%), Gaps = 73/287 (25%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+ +++AY        +++    +Y+MD    +    +         P++   G + 
Sbjct: 60  SISPDGKQIAYTVAYYSVPENKSHHVIYVMDAD-GKNNTLLTQTAWNESEPQWIKGGTKI 118

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK------- 325
                +     I+ ++        +++        S+SPD  +I+F S  +         
Sbjct: 119 AFLCNESGGSQIWEMNPDGTERRIISDFKGNIEGFSFSPDGKKILFISQIKYGQRTVDLY 178

Query: 326 --------------------------EQLYVMQSNGSDQKRISQDKEASYFDP------- 352
                                        ++   +G+     +   E   F+        
Sbjct: 179 PDLPKASGIIVNDLMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFEAPMKPFGG 238

Query: 353 ----VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED----------- 389
                WS     IA+T                I +   +      L +            
Sbjct: 239 IEQLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEM 298

Query: 390 -SNLQAPTWSPSGRSLIF-SRKKDG--DTGSKLYSIDLNGRNETLIN 432
                 P +SP+G+ + + S ++DG     ++L   +L+   +T + 
Sbjct: 299 KGYDTNPKFSPNGKYIAWQSMERDGYESDRNRLCIYNLDDGQKTFVT 345



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 111/324 (34%), Gaps = 76/324 (23%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+          + +  M+ DG   R ++  +  I     FSP+ +K+ + +    
Sbjct: 116 TKIAFLCNESGG----SQIWEMNPDGTERRIISDFKGNIEGF-SFSPDGKKILFISQIKY 170

Query: 235 DILRVYL-------------------MDTRIDRAPKR-IGNFRSMILAPR---------- 264
               V L                    D  ++  P   I +F   ++             
Sbjct: 171 GQRTVDLYPDLPKASGIIVNDLMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFE 230

Query: 265 -------------FSSNGKRALISVQKDEAM--------DIYSVDLQSNATERL------ 297
                        +S++ K+   + +K + +        DIY  +++   T  L      
Sbjct: 231 APMKPFGGIEQLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGK 290

Query: 298 ----TNT-LFINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEA 347
               T+     + +  +SP+   I ++S +R+G    + +L +   +   +  +++  E+
Sbjct: 291 DSNGTDEMKGYDTNPKFSPNGKYIAWQSMERDGYESDRNRLCIYNLDDGQKTFVTESFES 350

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
              D  W+     + F         +     +G  ++L     +  +   +  G  +I +
Sbjct: 351 GVDDYCWNNDSQSLYFVGVWHGTSMVYSANLNGDIKKLTDGMYDYGSVAMA--GDKII-T 407

Query: 408 RKKDGDTGSKLYSID-LNGRNETL 430
           ++       ++Y++   +G+   L
Sbjct: 408 KRHSISAADEIYTLTPADGQVAQL 431



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 81/268 (30%), Gaps = 55/268 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-----------------FRSMI 260
            +S + +++AY +   + +      D+ I       G                   +   
Sbjct: 243 AWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEMKGYD 302

Query: 261 LAPRFSSNGKRALI-SVQKDE----AMDIYSVDLQSNATERLTNT--LFINISASYSPDS 313
             P+FS NGK     S+++D        +   +L       +T +    ++    ++ DS
Sbjct: 303 TNPKFSPNGKYIAWQSMERDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDY-CWNNDS 361

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFA 372
             + F     G   +Y    NG     I +  +  Y     +  GD I   + S      
Sbjct: 362 QSLYFVGVWHGTSMVYSANLNGD----IKKLTDGMYDYGSVAMAGDKIITKRHSISAADE 417

Query: 373 IGVMKKDGSQERLLVEDSNLQA---------PTWSP--SGRSLIFSRKKDGDTGSKLYSI 421
           I  +     Q   L  +++              W+    G+ ++            +Y +
Sbjct: 418 IYTLTPADGQVAQLSHENDHIFKQLNLGKVEERWTKTTDGKQML---------SWVIYPV 468

Query: 422 --DLNGRNETLINTPAYASDPQ---WVG 444
             D N +  TL+        P    W  
Sbjct: 469 NFDANKKYPTLLFCEGGPQSPVSQFWSY 496



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 11/91 (12%)

Query: 364 TKFSGEKFA--IGVMKKDGSQERLLVED----SNLQAPTWSPSGRSLIFS----RKKDGD 413
            K  G+ +   IG  +      RL  E       + + + SP G+ + ++       +  
Sbjct: 22  VKQEGQGYEPIIGKQEITIKDGRLTPEALWAMGRIGSLSISPDGKQIAYTVAYYSVPENK 81

Query: 414 TGSKLYSIDLNGRNETLINTPAYA-SDPQWV 443
           +   +Y +D +G+N TL+   A+  S+PQW+
Sbjct: 82  SHHVIYVMDADGKNNTLLTQTAWNESEPQWI 112



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 56/141 (39%), Gaps = 8/141 (5%)

Query: 212 QILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                P+FSPN + +A+ + +      D  R+ + +    +      +F S +    +++
Sbjct: 300 GYDTNPKFSPNGKYIAWQSMERDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDYCWNN 359

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKE 326
           + +             +YS +L     ++LT+ ++   S + +    +I+ +       +
Sbjct: 360 DSQSLYFVGVWHGTSMVYSANLN-GDIKKLTDGMYDYGSVAMA--GDKIITKRHSISAAD 416

Query: 327 QLYVMQSNGSDQKRISQDKEA 347
           ++Y +        ++S + + 
Sbjct: 417 EIYTLTPADGQVAQLSHENDH 437


>gi|153002627|ref|YP_001368308.1| peptidase S9 prolyl oligopeptidase [Shewanella baltica OS185]
 gi|151367245|gb|ABS10245.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella baltica OS185]
          Length = 673

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 54/327 (16%), Positives = 112/327 (34%), Gaps = 66/327 (20%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I+           K S  +   DG + R +T  +   + EP FSP+ + +A+ +  +ED
Sbjct: 48  HIIAPVTEYDLKADKGSTQLWRFDGKHNRAITA-KGLRVSEPVFSPDGKTLAFVSQRNED 106

Query: 236 -ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-------------------- 274
              ++YL+        +R+ +  + + + ++   GK                        
Sbjct: 107 EASQIYLLPMDGPGEAQRLTDIPTGVNSIKW--VGKHLYFISNIFPNQSWEEMKTQLATD 164

Query: 275 --------------------SVQKDEAMDIYSVDLQSNATERLTNTLF------INISAS 308
                                + +     ++ +  +    E +T             SAS
Sbjct: 165 TDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHELPRSDQSSAS 224

Query: 309 Y--SPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           Y  SP+   I F +     +      +++    G+  + ++ D +A   +P +SP G  +
Sbjct: 225 YGVSPNERWIAFNAYGSENKVDPKIDIFLAAIGGNKAENLTADNQAPDLNPSFSPNGKTL 284

Query: 362 AFTKFSGEKF-----AIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDT 414
           AFT+     F      + ++  D  +   L  D +  +   +W+P  +   F    +   
Sbjct: 285 AFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTPDNKG--FYATVEDAA 342

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQ 441
            +++YSID        I      S P 
Sbjct: 343 TNRIYSIDAKSGKVKAITEATDFSQPA 369



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 98/295 (33%), Gaps = 72/295 (24%)

Query: 217 PRFSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  SP  + +      Y    D+   +++  D    +  + I      +  P FS +GK 
Sbjct: 40  PIVSPTGEHIIAPVTEYDLKADKGSTQLWRFD---GKHNRAITAKGLRVSEPVFSPDGKT 96

Query: 272 ALISVQK--DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-------- 320
                Q+  DEA  IY + +      +RLT+      S  +      + F S        
Sbjct: 97  LAFVSQRNEDEASQIYLLPMDGPGEAQRLTDIPTGVNSIKWV--GKHLYFISNIFPNQSW 154

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQ----- 343
                                           D   +  ++ + + G + + I+Q     
Sbjct: 155 EEMKTQLATDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHE 214

Query: 344 --DKEASYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLVEDSN--LQA 394
               + S      SP    IAF  +  E        I +    G++   L  D+      
Sbjct: 215 LPRSDQSSASYGVSPNERWIAFNAYGSENKVDPKIDIFLAAIGGNKAENLTADNQAPDLN 274

Query: 395 PTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
           P++SP+G++L F+R+K        S+L  +D++ R  T + +      S   W  
Sbjct: 275 PSFSPNGKTLAFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTP 329



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 85/267 (31%), Gaps = 17/267 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            + F+S    +   +     +  D  N             +     ++++ A+       
Sbjct: 141 HLYFISNIFPNQSWEEMKTQLATDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAK 200

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-----QKDEAMDIYSVDLQ 290
              V  +         R  +  S       S N +    +      + D  +DI+   + 
Sbjct: 201 GGNVENITQPAGHELPR-SDQSSASYG--VSPNERWIAFNAYGSENKVDPKIDIFLAAIG 257

Query: 291 SNATERLT-NTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKRISQD 344
            N  E LT +    +++ S+SP+   + F   +         +L ++  +      ++ D
Sbjct: 258 GNKAENLTADNQAPDLNPSFSPNGKTLAFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSD 317

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S     W+P       T        I  +     + + + E ++   P     G  +
Sbjct: 318 WDRSVSQFSWTPDNKGFYATVEDAATNRIYSIDAKSGKVKAITEATDFSQPAIGKDGELI 377

Query: 405 IFSRKKDGDTGSKLYSID-LNGRNETL 430
                +     ++L SI+  NG+ E L
Sbjct: 378 A--TNQSFLYPARLVSINPRNGKIERL 402



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 68/248 (27%), Gaps = 68/248 (27%)

Query: 260 ILAPRFSSNGKRAL-----ISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +P  S  G+  +       ++ D  +  ++  D        +T          +SPD 
Sbjct: 37  IGSPIVSPTGEHIIAPVTEYDLKADKGSTQLWRFD--GKHNRAITAKGLRVSEPVFSPDG 94

Query: 314 SQIVFESDR--EGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
             + F S R  +   Q+Y++  +G  + +R++ D         W   G  + F       
Sbjct: 95  KTLAFVSQRNEDEASQIYLLPMDGPGEAQRLT-DIPTGVNSIKWV--GKHLYFISNIFPN 151

Query: 367 ------------------------------------SGEKFAIGVMKKDGSQERLLVEDS 390
                                                  +  +  +   G     + + +
Sbjct: 152 QSWEEMKTQLATDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPA 211

Query: 391 NLQAPT---------WSPSGRSLIF---SRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             + P           SP+ R + F     +   D    ++   + G     +     A 
Sbjct: 212 GHELPRSDQSSASYGVSPNERWIAFNAYGSENKVDPKIDIFLAAIGGNKAENLTADNQAP 271

Query: 439 D--PQWVG 444
           D  P +  
Sbjct: 272 DLNPSFSP 279


>gi|150005859|ref|YP_001300603.1| prolyl oligopeptidase family protein [Bacteroides vulgatus ATCC
           8482]
 gi|294775569|ref|ZP_06741079.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           vulgatus PC510]
 gi|149934283|gb|ABR40981.1| prolyl oligopeptidase family protein [Bacteroides vulgatus ATCC
           8482]
 gi|294450619|gb|EFG19109.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           vulgatus PC510]
          Length = 706

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 72/245 (29%), Gaps = 56/245 (22%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------IY 285
             E I+    +  +  R           I +   S +GK+   +V      +      IY
Sbjct: 28  GYEPIIGKQEITIKDGRLTPEALWAMGRIGSLSISPDGKQIAYTVAYYSVPENKSHHVIY 87

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            +D        LT T +      +    ++I F  +  G  Q++ M  +G++ +RI  D 
Sbjct: 88  VMDADGKNNTLLTQTAWNESEPQWIKGGTKIAFLCNESGGSQIWEMNPDGTE-RRIISDF 146

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF---------------------------------A 372
           + +     +SP G  I F                                          
Sbjct: 147 KGNIEGFSFSPDGKKILFISQIKYGQRTVDLYPDLPKASGIIVNDLMYKHWDEWVESIPH 206

Query: 373 IGVMKKDG---SQERLLVEDSNLQAP----------TWSPSGRSLIFSRKKDGDTGSKLY 419
             +   DG        ++E    +AP           WS   + + ++ +K        Y
Sbjct: 207 PFIADFDGNMMGAATDIMEGEPFEAPMKPFGGIEQLAWSNDSKQIAYTSRKKQGLA---Y 263

Query: 420 SIDLN 424
           ++  +
Sbjct: 264 AVSTD 268



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 99/322 (30%), Gaps = 75/322 (23%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV      + + VMD DG N   L         EP++     K+A+   +     +++ 
Sbjct: 75  YSVPENKSHHVIYVMDADGKN-NTLLTQTAWNESEPQWIKGGTKIAFLCNESGGS-QIWE 132

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------------------------ 277
           M+       + I +F+  I    FS +GK+ L   Q                        
Sbjct: 133 MNPD-GTERRIISDFKGNIEGFSFSPDGKKILFISQIKYGQRTVDLYPDLPKASGIIVND 191

Query: 278 ---------KDEAMDIYSVDLQS---NATERLTNTLFINI---------SASYSPDSSQI 316
                     +     +  D       A   +                   ++S DS QI
Sbjct: 192 LMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFEAPMKPFGGIEQLAWSNDSKQI 251

Query: 317 VFESDR--------EGKEQLYVMQSNGSDQKRI----------SQDKEASYFDPVWSPQG 358
            + S +             +Y+          +          + + +    +P +SP G
Sbjct: 252 AYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEMKGYDTNPKFSPNG 311

Query: 359 DLIAFTKFSGEKFA-----IGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKD 411
             IA+     + +      + +   D  Q+  + E   S +    W+   +SL F     
Sbjct: 312 KYIAWQSMERDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDYCWNNDSQSLYFVGVWH 371

Query: 412 GDTGSKLYSIDLNGRNETLINT 433
           G   S +YS +LNG  + L + 
Sbjct: 372 GT--SMVYSANLNGDIKKLTDG 391



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/287 (12%), Positives = 85/287 (29%), Gaps = 73/287 (25%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+ +++AY        +++    +Y+MD    +    +         P++   G + 
Sbjct: 60  SISPDGKQIAYTVAYYSVPENKSHHVIYVMDAD-GKNNTLLTQTAWNESEPQWIKGGTKI 118

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK------- 325
                +     I+ ++        +++        S+SPD  +I+F S  +         
Sbjct: 119 AFLCNESGGSQIWEMNPDGTERRIISDFKGNIEGFSFSPDGKKILFISQIKYGQRTVDLY 178

Query: 326 --------------------------EQLYVMQSNGSDQKRISQDKEASYFDP------- 352
                                        ++   +G+     +   E   F+        
Sbjct: 179 PDLPKASGIIVNDLMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFEAPMKPFGG 238

Query: 353 ----VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED----------- 389
                WS     IA+T                I +   +      L +            
Sbjct: 239 IEQLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEM 298

Query: 390 -SNLQAPTWSPSGRSLIF-SRKKDG--DTGSKLYSIDLNGRNETLIN 432
                 P +SP+G+ + + S ++DG     ++L   +L+   +T + 
Sbjct: 299 KGYDTNPKFSPNGKYIAWQSMERDGYESDRNRLCIYNLDDGQKTFVT 345



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 111/324 (34%), Gaps = 76/324 (23%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+          + +  M+ DG   R ++  +  I     FSP+ +K+ + +    
Sbjct: 116 TKIAFLCNESGG----SQIWEMNPDGTERRIISDFKGNIEGF-SFSPDGKKILFISQIKY 170

Query: 235 DILRVYL-------------------MDTRIDRAPKR-IGNFRSMILAPR---------- 264
               V L                    D  ++  P   I +F   ++             
Sbjct: 171 GQRTVDLYPDLPKASGIIVNDLMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFE 230

Query: 265 -------------FSSNGKRALISVQKDEAM--------DIYSVDLQSNATERL------ 297
                        +S++ K+   + +K + +        DIY  +++   T  L      
Sbjct: 231 APMKPFGGIEQLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGK 290

Query: 298 ----TNT-LFINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEA 347
               T+     + +  +SP+   I ++S +R+G    + +L +   +   +  +++  E+
Sbjct: 291 DSNGTDEMKGYDTNPKFSPNGKYIAWQSMERDGYESDRNRLCIYNLDDGQKTFVTESFES 350

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
              D  W+     + F         +     +G  ++L     +  +   +  G  +I +
Sbjct: 351 GVDDYCWNNDSQSLYFVGVWHGTSMVYSANLNGDIKKLTDGMYDYGSVAMA--GDKII-T 407

Query: 408 RKKDGDTGSKLYSID-LNGRNETL 430
           ++       ++Y++   +G+   L
Sbjct: 408 KRHSISAADEIYTLTPADGQVAQL 431



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 81/268 (30%), Gaps = 55/268 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-----------------FRSMI 260
            +S + +++AY +   + +      D+ I       G                   +   
Sbjct: 243 AWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEMKGYD 302

Query: 261 LAPRFSSNGKRALI-SVQKDE----AMDIYSVDLQSNATERLTNT--LFINISASYSPDS 313
             P+FS NGK     S+++D        +   +L       +T +    ++    ++ DS
Sbjct: 303 TNPKFSPNGKYIAWQSMERDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDY-CWNNDS 361

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFA 372
             + F     G   +Y    NG     I +  +  Y     +  GD I   + S      
Sbjct: 362 QSLYFVGVWHGTSMVYSANLNGD----IKKLTDGMYDYGSVAMAGDKIITKRHSISAADE 417

Query: 373 IGVMKKDGSQERLLVEDSNLQA---------PTWSP--SGRSLIFSRKKDGDTGSKLYSI 421
           I  +     Q   L  +++              W+    G+ ++            +Y +
Sbjct: 418 IYTLTPADGQVAQLSHENDHIFKQLNLGKVEERWTKTTDGKQML---------SWVIYPV 468

Query: 422 --DLNGRNETLINTPAYASDPQ---WVG 444
             D N +  TL+        P    W  
Sbjct: 469 NFDANKKYPTLLFCEGGPQSPVSQFWSY 496



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 11/91 (12%)

Query: 364 TKFSGEKFA--IGVMKKDGSQERLLVED----SNLQAPTWSPSGRSLIFS----RKKDGD 413
            K  G+ +   IG  +      RL  E       + + + SP G+ + ++       +  
Sbjct: 22  VKQEGQGYEPIIGKQEITIKDGRLTPEALWAMGRIGSLSISPDGKQIAYTVAYYSVPENK 81

Query: 414 TGSKLYSIDLNGRNETLINTPAYA-SDPQWV 443
           +   +Y +D +G+N TL+   A+  S+PQW+
Sbjct: 82  SHHVIYVMDADGKNNTLLTQTAWNESEPQWI 112



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 56/141 (39%), Gaps = 8/141 (5%)

Query: 212 QILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                P+FSPN + +A+ + +      D  R+ + +    +      +F S +    +++
Sbjct: 300 GYDTNPKFSPNGKYIAWQSMERDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDYCWNN 359

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKE 326
           + +             +YS +L     ++LT+ ++   S + +    +I+ +       +
Sbjct: 360 DSQSLYFVGVWHGTSMVYSANLN-GDIKKLTDGMYDYGSVAMA--GDKIITKRHSISAAD 416

Query: 327 QLYVMQSNGSDQKRISQDKEA 347
           ++Y +        ++S + + 
Sbjct: 417 EIYTLTPADGQVAQLSHENDH 437


>gi|253567110|ref|ZP_04844561.1| prolyl oligopeptidase [Bacteroides sp. 3_2_5]
 gi|251944234|gb|EES84743.1| prolyl oligopeptidase [Bacteroides sp. 3_2_5]
          Length = 702

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 62/381 (16%), Positives = 131/381 (34%), Gaps = 78/381 (20%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDV---KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            G +      +     V +  + V   K  +++       +    R+I HT     YQ  
Sbjct: 55  IGGLAVSPDGKQIAYTVAY--YSVPENKSNREVFVMNADGTDN--RQITHTP----YQEN 106

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                   S++LF+S    +    + L  M+ DG+  + ++     I      SP+ +K+
Sbjct: 107 EVTWAADGSKLLFLS----NDNGSSQLYEMNPDGSGRKQISKYDGDIEGY-SISPDGKKI 161

Query: 227 AY--------------------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---- 262
            +                          D++  +  +         I +F    ++    
Sbjct: 162 LFIAQVKTVKSTADKYPDLDKATGIIITDLMYKHWDEWVTTAPHPFIADFDGKSISNIID 221

Query: 263 ------------P-------RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATE 295
                       P        +++   +   + +K            DIY  DL +  T 
Sbjct: 222 VLEGEPYESPMKPWGGIEQLAWNTTSDKVAYTCRKKTGLAYAISTNSDIYVYDLNTKKTV 281

Query: 296 RLTNTL-FINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASY 349
            +T  +   + +  YSPD   I ++S +R+G    + +L+VM     +++ +S+  +++ 
Sbjct: 282 NITEGMMGYDTNPQYSPDGKSIAWQSMERDGYEADQNRLFVMNLETGEKRFVSKAFDSNV 341

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              +WS     I FT     +  I  +       R +           +  G  LI +++
Sbjct: 342 DAFIWSRDAKTIYFTGVWHGETQIYSLDLANDSVRPVTSGMYDYEGV-ALFGDKLI-AKR 399

Query: 410 KDGDTGSKLYSIDLNGRNETL 430
                G ++Y+I L+G+   L
Sbjct: 400 HSMSMGDEIYAIALDGQTTQL 420



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 86/248 (34%), Gaps = 63/248 (25%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S +GK+   +V      +     +++ ++       ++T+T +     +++ 
Sbjct: 53  GRIGGLAVSPDGKQIAYTVAYYSVPENKSNREVFVMNADGTDNRQITHTPYQENEVTWAA 112

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
           D S+++F S+  G  QLY M  +GS +K+IS+  +        SP G  I F        
Sbjct: 113 DGSKLLFLSNDNGSSQLYEMNPDGSGRKQISKY-DGDIEGYSISPDGKKILFIAQVKTVK 171

Query: 367 -SGEKF---------------------------AIGVMKKDGSQERLLVEDSNLQAPTWS 398
            + +K+                              +   DG     ++ D     P  S
Sbjct: 172 STADKYPDLDKATGIIITDLMYKHWDEWVTTAPHPFIADFDGKSISNII-DVLEGEPYES 230

Query: 399 PS--------------GRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTP--AY 436
           P                  + ++ RKK G      T S +Y  DLN +    I      Y
Sbjct: 231 PMKPWGGIEQLAWNTTSDKVAYTCRKKTGLAYAISTNSDIYVYDLNTKKTVNITEGMMGY 290

Query: 437 ASDPQWVG 444
            ++PQ+  
Sbjct: 291 DTNPQYSP 298



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 91/277 (32%), Gaps = 63/277 (22%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+ +++AY        +++    V++M+       ++I +         ++++G + 
Sbjct: 59  AVSPDGKQIAYTVAYYSVPENKSNREVFVMNADGTDN-RQITHTPYQENEVTWAADGSKL 117

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
           L     + +  +Y ++   +  ++++         S SPD  +I+F +            
Sbjct: 118 LFLSNDNGSSQLYEMNPDGSGRKQISKYDGDIEGYSISPDGKKILFIAQVKTVKSTADKY 177

Query: 322 ----------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDP------- 352
                                        ++   +G     I    E   ++        
Sbjct: 178 PDLDKATGIIITDLMYKHWDEWVTTAPHPFIADFDGKSISNIIDVLEGEPYESPMKPWGG 237

Query: 353 ----VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWS 398
                W+   D +A+T                I V   +  +   + E        P +S
Sbjct: 238 IEQLAWNTTSDKVAYTCRKKTGLAYAISTNSDIYVYDLNTKKTVNITEGMMGYDTNPQYS 297

Query: 399 PSGRSLIF-SRKKDGDTGSK--LYSIDLNGRNETLIN 432
           P G+S+ + S ++DG    +  L+ ++L    +  ++
Sbjct: 298 PDGKSIAWQSMERDGYEADQNRLFVMNLETGEKRFVS 334


>gi|298251920|ref|ZP_06975723.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297546512|gb|EFH80380.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 747

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 85/273 (31%), Gaps = 28/273 (10%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S +  +   + +   +  DG     +  +    +    +SP+ + +A A+ D      + 
Sbjct: 431 SVNTTNTTSRATQPQITSDGT---LIYRAHPARVNSIAWSPDGKLIASASDDQ----LIQ 483

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN- 299
           + D       +        +    +S +G R   S  +D  + ++  D  +   E+LT  
Sbjct: 484 VFDAGTGVVKRTYIGHTGAVTNVAWSPDGTRLA-SASEDHTLQVW--DAANG--EKLTTY 538

Query: 300 --TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                I  + S+S D   I   S+    + + V  S         Q   A      W+P 
Sbjct: 539 QGHSGIVNALSWSSDGQLIASASE---DKSVQVWNSASGGLFLNYQQHSAGVLCVAWAPD 595

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLV-----EDSNLQAPTWSPSGRSLIFSRKKDG 412
           G  IA   +         +  D       +       + +    WSP G+ +       G
Sbjct: 596 GHSIASGSWDDTLQDWATIPSDAFAIGQTIFKYGGHTAEIYTVAWSPDGQFIA----SGG 651

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
              + L    ++G  +        A     W  
Sbjct: 652 GDRTVLIGRGVDGVTKVKYLGHNDAVHGISWSP 684



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 69/232 (29%), Gaps = 16/232 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + S    ++L V D               I+    +S + Q +A A+ D      V + 
Sbjct: 514 RLASASEDHTLQVWDAANGEKLTTYQGHSGIVNALSWSSDGQLIASASEDK----SVQVW 569

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ----SNATERLT 298
           ++             + +L   ++ +G         D   D  ++            +  
Sbjct: 570 NSASGGLFLNYQQHSAGVLCVAWAPDGHSIASGSWDDTLQDWATIPSDAFAIGQTIFKYG 629

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  + ++SPD     F +   G   + + +      K        +     WSP G
Sbjct: 630 GHTAEIYTVAWSPDGQ---FIASGGGDRTVLIGRGVDGVTKVKYLGHNDAVHGISWSPDG 686

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSR 408
            LIA     G    + V      Q          ++ A  WSP GR +  S 
Sbjct: 687 KLIASCSEDGT---VQVWDASSRQVLYTYHGHSRSVYAVAWSPDGRRIASSS 735



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 63/187 (33%), Gaps = 9/187 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD--EDILRVYLMD 243
           S     S+ V +     +          +    ++P+   +A  ++DD  +D   +    
Sbjct: 559 SASEDKSVQVWNSASGGLFLNYQQHSAGVLCVAWAPDGHSIASGSWDDTLQDWATIPSDA 618

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLF 302
             I +   + G   + I    +S +G+         +   +    +      + L +   
Sbjct: 619 FAIGQTIFKYGGHTAEIYTVAWSPDGQFIA--SGGGDRTVLIGRGVDGVTKVKYLGHNDA 676

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           ++   S+SPD   I   S+ +G  Q++   ++             S +   WSP G  IA
Sbjct: 677 VH-GISWSPDGKLIASCSE-DGTVQVW--DASSRQVLYTYHGHSRSVYAVAWSPDGRRIA 732

Query: 363 FTKFSGE 369
            +     
Sbjct: 733 SSSADNT 739



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 53/145 (36%), Gaps = 19/145 (13%)

Query: 277 QKDEAMDIYSVDLQSNATE-RLTN--------TLFINISASYSPDSSQIVFESDREGKEQ 327
             + +  + + +  S AT+ ++T+              S ++SPD   I   SD    + 
Sbjct: 425 SGNASHSVNTTNTTSRATQPQITSDGTLIYRAHPARVNSIAWSPDGKLIASASD---DQL 481

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + V  +     KR       +  +  WSP G  +A      E   + V       E+L  
Sbjct: 482 IQVFDAGTGVVKRTYIGHTGAVTNVAWSPDGTRLASAS---EDHTLQVWDAANG-EKLTT 537

Query: 388 EDSN---LQAPTWSPSGRSLIFSRK 409
              +   + A +WS  G+ +  + +
Sbjct: 538 YQGHSGIVNALSWSSDGQLIASASE 562


>gi|145504575|ref|XP_001438254.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405426|emb|CAK70857.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2419

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 82/223 (36%), Gaps = 19/223 (8%)

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
            N  Y      + +    FSP+   +A  + D      + L D +  +   ++      + 
Sbjct: 2125 NDIYSLDGHSRYVNTVNFSPDGNMLASCSLDK----SIRLWDVKTGQQKAKLDGHDDAVS 2180

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFES 320
            + +FS +G   + SV  D ++ ++  D+++     +L        S ++SPD + +   S
Sbjct: 2181 SVKFSPDGTTLV-SVSSDSSIRLW--DVKTGQQFAKLDGHSDAVYSVNFSPDGTTLASGS 2237

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                   + +       QK          +   +SP G  +A        F+I       
Sbjct: 2238 Q---DNSIRLWDVKTGQQKAKLDGHSHFVYSVHFSPDGTTLASGSRD---FSIRFWDVRT 2291

Query: 381  SQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             Q++  ++   S + +  +SP G +L        D   +L+ +
Sbjct: 2292 GQQKAKLDGHSSTVTSVNFSPDGTTLA---SGSEDNSIRLWDV 2331



 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 84/247 (34%), Gaps = 21/247 (8%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  S+ + D      +      D  +   +FSP+   +   + D      + L D +  
Sbjct: 2153 SLDKSIRLWDVKTGQQKAKLDGHDDAVSSVKFSPDGTTLVSVSSDS----SIRLWDVKTG 2208

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINIS 306
            +   ++      + +  FS +G     S  +D ++ ++  D+++   + +L        S
Sbjct: 2209 QQFAKLDGHSDAVYSVNFSPDGTTLA-SGSQDNSIRLW--DVKTGQQKAKLDGHSHFVYS 2265

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              +SPD + +   S       +         QK       ++     +SP G  +A    
Sbjct: 2266 VHFSPDGTTLASGSR---DFSIRFWDVRTGQQKAKLDGHSSTVTSVNFSPDGTTLASGSE 2322

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  I +      Q ++   D +     +  +SP G +L       GD   +L+ +  
Sbjct: 2323 DNS---IRLWDVKTGQ-QIAKLDGHENGILSVHFSPDGTTLA---SGSGDNSIRLWDVKT 2375

Query: 424  NGRNETL 430
              +   L
Sbjct: 2376 GQQKAKL 2382



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 91/274 (33%), Gaps = 35/274 (12%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              RLWDVK  +Q                 H   D +        G           ++VS
Sbjct: 2157 SIRLWDVKTGQQKAKLD-----------GH--DDAVSSVKFSPDG----------TTLVS 2193

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                +S+ + D                ++   FSP+   +A  + D+     + L D + 
Sbjct: 2194 VSSDSSIRLWDVKTGQQFAKLDGHSDAVYSVNFSPDGTTLASGSQDN----SIRLWDVKT 2249

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINI 305
             +   ++      + +  FS +G     S  +D ++  +  D+++   + +L        
Sbjct: 2250 GQQKAKLDGHSHFVYSVHFSPDGTTLA-SGSRDFSIRFW--DVRTGQQKAKLDGHSSTVT 2306

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S ++SPD + +   S+      + +       Q       E       +SP G  +A + 
Sbjct: 2307 SVNFSPDGTTLASGSE---DNSIRLWDVKTGQQIAKLDGHENGILSVHFSPDGTTLA-SG 2362

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                   +  +K    + +L    S + +  +SP
Sbjct: 2363 SGDNSIRLWDVKTGQQKAKLNGHSSTVTSVNFSP 2396



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/253 (17%), Positives = 86/253 (33%), Gaps = 38/253 (15%)

Query: 109  QVLVTGRVIKEGKDRLRVE----FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
              + + +   +G   + V      RLWDVK  +Q                 H  SD +Y 
Sbjct: 2177 DAVSSVKFSPDGTTLVSVSSDSSIRLWDVKTGQQFAKLD-----------GH--SDAVYS 2223

Query: 165  SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                  G           ++ SG   NS+ + D      +         ++   FSP+  
Sbjct: 2224 VNFSPDG----------TTLASGSQDNSIRLWDVKTGQQKAKLDGHSHFVYSVHFSPDGT 2273

Query: 225  KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
             +A  + D      +   D R  +   ++    S + +  FS +G     S  +D ++ +
Sbjct: 2274 TLASGSRD----FSIRFWDVRTGQQKAKLDGHSSTVTSVNFSPDGTTLA-SGSEDNSIRL 2328

Query: 285  YSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            +  D+++     +L       +S  +SPD + +   S   G   + +       QK    
Sbjct: 2329 W--DVKTGQQIAKLDGHENGILSVHFSPDGTTLASGS---GDNSIRLWDVKTGQQKAKLN 2383

Query: 344  DKEASYFDPVWSP 356
               ++     +SP
Sbjct: 2384 GHSSTVTSVNFSP 2396


>gi|317141052|ref|XP_001817163.2| hypothetical protein AOR_1_2924174 [Aspergillus oryzae RIB40]
          Length = 1587

 Score = 90.8 bits (224), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 59/342 (17%), Positives = 113/342 (33%), Gaps = 71/342 (20%)

Query: 84   QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK 143
               FK      D I     W+  G Q++         +DR     R+ +     Q+    
Sbjct: 1166 TSQFKSITRGHDEILESITWSHDGVQLV------SLAEDR---TVRVRNTTTGGQL---S 1213

Query: 144  FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
             F    + R   H  +D I++ +    G            + SG    ++ V +    + 
Sbjct: 1214 IFQGRPNIR---HWHTDYIHKLVWSPDG----------NQLASGSGDGTVRVWNPITGDQ 1260

Query: 204  RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
              +       + +  +SP+ +++A A+ D      + + +          G+    I   
Sbjct: 1261 LSIFRDHINDIRDIAWSPDGRQLASASADS----TIRVWNPTTGNQLSISGDHIKRITYI 1316

Query: 264  RFSSNGKRALISVQKDEAMDIY------SVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             +S +G +   SV  +    ++       + +  +  +R T+        ++SPD SQ+ 
Sbjct: 1317 AWSPDGSQLA-SVALNGTAQVWNPTTGDQLSISGDGIKRATDI-------AWSPDGSQLA 1368

Query: 318  FESDREGKEQLYV------MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              +   G  Q++       +  +G   KRI+        D  WSP G  +A    +G   
Sbjct: 1369 SVAL-NGTAQVWKPTTSDHLSISGYGIKRIT--------DIAWSPDGSQLASVALNGT-- 1417

Query: 372  AIGVMKKDGSQERLLVEDSNLQA--------PTWSPSGRSLI 405
             + V       E  L    +             WSP G  L 
Sbjct: 1418 -VWVWNLTT--ESQLSSFGDNHWNDADYSSKVAWSPDGSQLA 1456



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 61/341 (17%), Positives = 114/341 (33%), Gaps = 68/341 (19%)

Query: 102  DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK--QIIGKKFFS------SPASWRK 153
             W+S G          +          R+WDV+      I+  +F        SP   R 
Sbjct: 1101 AWSSDG---------SRLASGSTDETIRIWDVRTMDCVFILEGQFSVILCLAWSPDGSRL 1151

Query: 154  IAHTISDDI--------YQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANI 203
             + ++ D+I        ++SIT    +    I +  + V  VS     ++ V +      
Sbjct: 1152 ASASMDDNIKIWDTTSQFKSITRGHDEILESITWSHDGVQLVSLAEDRTVRVRNTTTGGQ 1211

Query: 204  RYLTPSRDQILFEPR-------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
              +   R  I            +SP+  ++A  + D      V + +           + 
Sbjct: 1212 LSIFQGRPNIRHWHTDYIHKLVWSPDGNQLASGSGDG----TVRVWNPITGDQLSIFRDH 1267

Query: 257  RSMILAPRFSSNGKRALISVQKDEAMDIY------SVDLQSNATERLTNTLFINISASYS 310
             + I    +S +G++   S   D  + ++       + +  +  +R+T         ++S
Sbjct: 1268 INDIRDIAWSPDGRQLA-SASADSTIRVWNPTTGNQLSISGDHIKRITYI-------AWS 1319

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            PD SQ+   +   G  Q++       DQ  IS D      D  WSP G  +A    +G  
Sbjct: 1320 PDGSQLASVAL-NGTAQVW--NPTTGDQLSISGDGIKRATDIAWSPDGSQLASVALNGTA 1376

Query: 371  FAIGV------MKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              +        +   G   + + +        WSP G  L 
Sbjct: 1377 -QVWKPTTSDHLSISGYGIKRITDI------AWSPDGSQLA 1410



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 92/277 (33%), Gaps = 37/277 (13%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             + SG    ++ + D    +  ++   +  ++    +SP+  ++A A+ D  D ++++  
Sbjct: 1108 RLASGSTDETIRIWDVRTMDCVFILEGQFSVILCLAWSPDGSRLASASMD--DNIKIWDT 1165

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             ++     +       ++ +  +S +G + + S+ +D  + +   +  +     +     
Sbjct: 1166 TSQFKSITR---GHDEILESITWSHDGVQLV-SLAEDRTVRVR--NTTTGGQLSIFQGRP 1219

Query: 303  INISAS--------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                          +SPD +Q+   S   G   + V      DQ  I +D      D  W
Sbjct: 1220 NIRHWHTDYIHKLVWSPDGNQLASGS---GDGTVRVWNPITGDQLSIFRDHINDIRDIAW 1276

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKD- 411
            SP G  +A          I V       +  +  D    +    WSP G  L        
Sbjct: 1277 SPDGRQLASASADST---IRVWNPTTGNQLSISGDHIKRITYIAWSPDGSQLASVALNGT 1333

Query: 412  ----GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                  T     SI  +G           A+D  W  
Sbjct: 1334 AQVWNPTTGDQLSISGDGIKR--------ATDIAWSP 1362



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/316 (13%), Positives = 99/316 (31%), Gaps = 61/316 (19%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVT---GRVIKEGKDRLRVEFRLWDVKDRKQ 138
            +   +   +++     P  + W++     LV    G  +  G     V  R+W+     Q
Sbjct: 1203 VRNTTTGGQLSIFQGRPNIRHWHTDYIHKLVWSPDGNQLASGSGDGTV--RVWNPITGDQ 1260

Query: 139  IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
            +    F       R IA                D           + S    +++ V + 
Sbjct: 1261 L--SIFRDHINDIRDIA-------------WSPDG--------RQLASASADSTIRVWNP 1297

Query: 199  DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
               N   ++    + +    +SP+  ++A    +        + +          G+   
Sbjct: 1298 TTGNQLSISGDHIKRITYIAWSPDGSQLASVALNG----TAQVWNPTTGDQLSISGDGIK 1353

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYS------VDLQSNATERLTNTLFINISASYSPD 312
                  +S +G +   SV  +    ++       + +     +R+T+        ++SPD
Sbjct: 1354 RATDIAWSPDGSQLA-SVALNGTAQVWKPTTSDHLSISGYGIKRITDI-------AWSPD 1405

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP------VWSPQGDLIAFTKF 366
             SQ+   +       ++V     + + ++S   +  + D        WSP G  +A    
Sbjct: 1406 GSQLASVAL---NGTVWVWNL--TTESQLSSFGDNHWNDADYSSKVAWSPDGSQLASLSH 1460

Query: 367  SGEKFAIGVMKKDGSQ 382
            S     + V+     Q
Sbjct: 1461 S----KVVVLDPASGQ 1472



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 87/244 (35%), Gaps = 25/244 (10%)

Query: 176  RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
             I ++  + V+ + ++++ V + D +    +       +    +S +Q ++A+ T     
Sbjct: 934  HIRWLDNNRVASMSRDAIKVWNPDTSQFVPIFEGNWYWVSSMAWSDDQSRLAFTT----- 988

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              R+ +++     +   +    S I +  +S  G R     +  EA+ ++  +++     
Sbjct: 989  GGRILILNLDTKESRSMLDGHESEITSIAWSPCGSRLASGSKYGEAISVW--NVRDMQCV 1046

Query: 296  RLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             +      +I   ++SPD S++   S       + V  +   D   + +   +      W
Sbjct: 1047 FILEGRLYSICCLAWSPDGSRLAAGSL---YPIVNVWDTQTRDCV-LRKGHASRITSVAW 1102

Query: 355  SPQGDLIAFTKFSG--EKFAIGVMK----KDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            S  G  +A          + +  M      +G    +L          WSP G  L  + 
Sbjct: 1103 SSDGSRLASGSTDETIRIWDVRTMDCVFILEGQFSVILCL-------AWSPDGSRLASAS 1155

Query: 409  KKDG 412
              D 
Sbjct: 1156 MDDN 1159



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 73/209 (34%), Gaps = 19/209 (9%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIG----NFRSM 259
                    ++    +S +  ++A   Y    I  +   + + I   PK       +    
Sbjct: 872  QTLEGHTDVICSLAWSRDGSRLASGAYSSARIWDLDTSECSVILEDPKAFSFSMLDLWRG 931

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVF 318
            ++  R+  +  R   S+ +D    I   +  ++    +     +   S ++S D S++ F
Sbjct: 932  VIHIRW-LDNNRVA-SMSRD---AIKVWNPDTSQFVPIFEGNWYWVSSMAWSDDQSRLAF 986

Query: 319  ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             +      ++ ++  +  + + +    E+      WSP G  +A     GE  AI V   
Sbjct: 987  TT----GGRILILNLDTKESRSMLDGHESEITSIAWSPCGSRLASGSKYGE--AISVWNV 1040

Query: 379  DGSQERLLVEDSNLQAP--TWSPSGRSLI 405
               Q   ++E          WSP G  L 
Sbjct: 1041 RDMQCVFILEGRLYSICCLAWSPDGSRLA 1069


>gi|145528438|ref|XP_001450017.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417609|emb|CAK82620.1| unnamed protein product [Paramecium tetraurelia]
          Length = 933

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 107/322 (33%), Gaps = 46/322 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  +Q                 H+    +        G     
Sbjct: 146 TILASGSSDNSIRLWDVKTGQQKAKLD-----------GHSSC--VNSICFSPDG----- 187

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG   NS+ + D      +         ++   FSP+   +A  +YD+   
Sbjct: 188 -----TTLASGSFDNSIRLWDVKTGQQKAKLNGHSDQVYSVDFSPDGTTLASGSYDN--- 239

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D +  +   ++      + +  FS +G     S   D ++ ++  D+++   + 
Sbjct: 240 -SIRLWDVKTGQQKAKLNGHSDQVYSVDFSPDGTTLA-SSSSDNSIRLW--DIKTIQQKA 295

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L        S  +SPD + +   S     + + +        +   +    + +   +S
Sbjct: 296 KLDGHSDYVRSVCFSPDGTTLASSS---ADKSIRLWNVMTGQAQAKLEGHSGTVYSICYS 352

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             G ++A +  + +   +  + K   Q  +   +    +  +SP G  L        D  
Sbjct: 353 LDGAILA-SSSADKSIRLWDVNKRELQAEIESHNRTHYSLCFSPDGSILA----SGSDNS 407

Query: 416 SKLYSI-------DLNGRNETL 430
             ++ +       +L+G N T+
Sbjct: 408 VNIWDVKTGQYKTELDGHNSTI 429



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 60/331 (18%), Positives = 123/331 (37%), Gaps = 31/331 (9%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRK---QIIGKKFFSSPA----SWRKIAHTISDDIYQSI 166
           G ++  G D       +WDVK  +   ++ G              R +A   +D+  +  
Sbjct: 397 GSILASGSDN---SVNIWDVKTGQYKTELDGHNSTIYSVCFSFEGRTLASGSNDNSIRLW 453

Query: 167 TGEKGD----FNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
             + G     F+  I F  +   + SG   NS+ + D      +         ++   FS
Sbjct: 454 DVKTGLQVAKFDGHICFSPDGTRLASGSSDNSMRIWDVQTGIQKAKLDGHSSTIYSVSFS 513

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +A  + D+     + L D  +++   ++    S I +  FS NG     S   D 
Sbjct: 514 PDGTTLASGSSDN----SIRLWDVELEQQKAKLDGHNSTIYSLCFSPNGTTLA-SGSSDN 568

Query: 281 AMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + ++  D++S      L +      S  +SPD   +   S     + + +      +QK
Sbjct: 569 TLRLW--DVKSGQQNIELVSHTSTVYSVCFSPDDITLASGS---ADKSIRLWDVKTGNQK 623

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                  ++ +   +SP G  +A   +  +   +  +K    + +L   +S +Q+  +SP
Sbjct: 624 AKLDGHNSTVYSINFSPDGATLASGSYD-KSIRLWDVKTGNQKAKLDGHNSTIQSVCFSP 682

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            G++L      D     +L+ + +      L
Sbjct: 683 DGKTLASGSDDD---SIRLWDVQIEQEKAKL 710



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/307 (16%), Positives = 109/307 (35%), Gaps = 41/307 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  +Q                 H  SD +Y       G     
Sbjct: 188 TTLASGSFDNSIRLWDVKTGQQKAKLN-----------GH--SDQVYSVDFSPDG----- 229

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG   NS+ + D      +         ++   FSP+   +A ++ D+   
Sbjct: 230 -----TTLASGSYDNSIRLWDVKTGQQKAKLNGHSDQVYSVDFSPDGTTLASSSSDN--- 281

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L D +  +   ++      + +  FS +G     S   D+++ +++V +   A  +
Sbjct: 282 -SIRLWDIKTIQQKAKLDGHSDYVRSVCFSPDGTTLA-SSSADKSIRLWNV-MTGQAQAK 338

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L        S  YS D + +   S     + + +   N  + +   +    +++   +SP
Sbjct: 339 LEGHSGTVYSICYSLDGAILASSS---ADKSIRLWDVNKRELQAEIESHNRTHYSLCFSP 395

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDT 414
            G ++A    SG   ++ +      Q +  ++  N  + +  +S  GR+L        D 
Sbjct: 396 DGSILA----SGSDNSVNIWDVKTGQYKTELDGHNSTIYSVCFSFEGRTLA---SGSNDN 448

Query: 415 GSKLYSI 421
             +L+ +
Sbjct: 449 SIRLWDV 455



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/284 (17%), Positives = 96/284 (33%), Gaps = 33/284 (11%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  +Q           +   ++HT    +Y             
Sbjct: 559 TTLASGSSDNTLRLWDVKSGQQ-----------NIELVSHT--STVYSVCFSPDDI---- 601

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG    S+ + D    N +      +  ++   FSP+   +A  +YD    
Sbjct: 602 ------TLASGSADKSIRLWDVKTGNQKAKLDGHNSTVYSINFSPDGATLASGSYDK--- 652

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L D +      ++    S I +  FS +GK    S   D+++ ++ V ++    + 
Sbjct: 653 -SIRLWDVKTGNQKAKLDGHNSTIQSVCFSPDGKTLA-SGSDDDSIRLWDVQIEQEKAK- 709

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L        S  +SPD + +   SD    + + +       QK        S     +S 
Sbjct: 710 LDGHSCAVQSVCFSPDGTTLASGSD---DKSIRLWDFQKGYQKAKLAGHGGSVNSVCFSL 766

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            G  +A +  S     +  +K    + +L    S +   ++S  
Sbjct: 767 DGTTLA-SGSSDYSIRLWEVKSGQQKAKLEGHSSVVWQVSFSSD 809



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 99/305 (32%), Gaps = 43/305 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  +Q                 H  SD +Y       G     
Sbjct: 230 TTLASGSYDNSIRLWDVKTGQQKAKLN-----------GH--SDQVYSVDFSPDG----- 271

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ S    NS+ + D      +         +    FSP+   +A ++ D    
Sbjct: 272 -----TTLASSSSDNSIRLWDIKTIQQKAKLDGHSDYVRSVCFSPDGTTLASSSADK--- 323

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L +    +A  ++      + +  +S +G   L S   D+++ ++ V+ +    E 
Sbjct: 324 -SIRLWNVMTGQAQAKLEGHSGTVYSICYSLDGA-ILASSSADKSIRLWDVNKRELQAE- 380

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + +    + S  +SPD S +   SD      + +        K       ++ +   +S 
Sbjct: 381 IESHNRTHYSLCFSPDGSILASGSDNS----VNIWDVKTGQYKTELDGHNSTIYSVCFSF 436

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           +G  +A          I +        ++   D ++    +SP G  L        D   
Sbjct: 437 EGRTLASGSNDNS---IRLWDVKTG-LQVAKFDGHIC---FSPDGTRLA---SGSSDNSM 486

Query: 417 KLYSI 421
           +++ +
Sbjct: 487 RIWDV 491



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 80/221 (36%), Gaps = 15/221 (6%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N           +    FSP+   +A  + D+     + L D +  +   ++    S + 
Sbjct: 124 NELNQLQGHSSTVQSVCFSPDGTILASGSSDN----SIRLWDVKTGQQKAKLDGHSSCVN 179

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFES 320
           +  FS +G     S   D ++ ++  D+++   + +L        S  +SPD + +   S
Sbjct: 180 SICFSPDGTTLA-SGSFDNSIRLW--DVKTGQQKAKLNGHSDQVYSVDFSPDGTTLASGS 236

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + +       QK          +   +SP G  +A +  S     +  +K   
Sbjct: 237 Y---DNSIRLWDVKTGQQKAKLNGHSDQVYSVDFSPDGTTLA-SSSSDNSIRLWDIKTIQ 292

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + +L      +++  +SP G +L        D   +L+++
Sbjct: 293 QKAKLDGHSDYVRSVCFSPDGTTLA---SSSADKSIRLWNV 330



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 104/319 (32%), Gaps = 40/319 (12%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    RLWDVK   Q                 H     I        G        
Sbjct: 646 ASGSYDKSIRLWDVKTGNQKAKLD-----------GHN--STIQSVCFSPDG-------- 684

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
             +++ SG   +S+ + D      +         +    FSP+   +A  + D      +
Sbjct: 685 --KTLASGSDDDSIRLWDVQIEQEKAKLDGHSCAVQSVCFSPDGTTLASGSDDK----SI 738

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L D +      ++      + +  FS +G     S   D ++ ++ V        +L  
Sbjct: 739 RLWDFQKGYQKAKLAGHGGSVNSVCFSLDGTTLA-SGSSDYSIRLWEV-KSGQQKAKLEG 796

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              +    S+S D +      D+     + +       QK        S +   +SP G 
Sbjct: 797 HSSVVWQVSFSSDETLASVSYDKS----IRLWDIKTEQQKTKLDGHVCSVYSVCFSPDGI 852

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           ++A +  + +   +  +K    + +L   +S + +  +SP G +L+       D   +L+
Sbjct: 853 MLA-SGSADKSIRLWDVKTGNKKAKLDGHNSTVYSINFSPDGATLVSGSY---DKSIRLW 908

Query: 420 SIDLNGRNETLINTPAYAS 438
            +    + + + N   ++S
Sbjct: 909 DVK---KKQQIANINGHSS 924


>gi|332705517|ref|ZP_08425595.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332355877|gb|EGJ35339.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1714

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 34/272 (12%)

Query: 164  QSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            +      G   + I F  +S    S     ++ + + D + +  L   +DQ+ +   FSP
Sbjct: 1436 RKAFSAHGQGLTAISFSPDSTIMASASEDKTVKLWNLDSSLLHTLEGHQDQV-WGVSFSP 1494

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + + +A A+ D      V L D       K +   +  +    FS +GK+   S   D  
Sbjct: 1495 DSKLIASASADK----TVKLWDLD-GTLVKTLEGHQDKVWGVSFSPDGKQIA-SASNDGT 1548

Query: 282  MDIYSVDLQSNATERLTNTLFINISA-------SYSPDSSQIVFESDREGKEQLYVMQSN 334
            + ++  + +    + L      N          S+SPD   I   S  +G  +L+    +
Sbjct: 1549 VKLW--NTKGKLLKTL---EGDNQEHNDAVNWVSFSPDGEMIASASS-DGTVKLW--NRD 1600

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            G     + +    +     +SP G LIA          + +  +DG       +  N   
Sbjct: 1601 GKLLNTL-KGHNGAVNWVSFSPDGTLIASAS---GDKTVNLWSRDG-HLINTFKGHNDSV 1655

Query: 395  --PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               ++SP G+ L  + K   D    L+++D++
Sbjct: 1656 FGVSFSPDGKWLASASK---DKTVILWNLDVD 1684



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/223 (18%), Positives = 88/223 (39%), Gaps = 16/223 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ +  +DGA +  LT   D +L     SPN Q +A A+ D    ++++  D  
Sbjct: 1215 SASEDKTVKLWSKDGALLHTLTGHSDSVLGV-SISPNGQLIASASKD--KTIKLWRRDGT 1271

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            + +  +        +++ RFS +GK    S   D  + ++  +      + L       +
Sbjct: 1272 LLKTWQA---HTKPVVSVRFSPDGKTIA-SASTDNTVKLWQTN--GELIDTLEGHRNWVL 1325

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              S+S D  ++   S       + +  S+G   + ++   E    D  +SP    IA   
Sbjct: 1326 DVSFSSDGKRLATAS---ADHTIKLWNSDGELIETLAGHSEM-VVDVSFSPDNKTIASAS 1381

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                   I +   DG     +  +  +++ ++SP+G  +  + 
Sbjct: 1382 VDKT---IRLWASDGGILAPIRHNQAVRSVSFSPNGEMIATAS 1421



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 95/239 (39%), Gaps = 21/239 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + + +    +++ + + DG  I  L     +++ +  FSP+ + +A A+ D    +R++ 
Sbjct: 1334 KRLATASADHTIKLWNSDGELIETL-AGHSEMVVDVSFSPDNKTIASASVD--KTIRLWA 1390

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D  I    +        + +  FS NG+    +   +    I  ++ +  + +  +   
Sbjct: 1391 SDGGILAPIR----HNQAVRSVSFSPNGEMIATASADN---TIQLLNRKDRSRKAFSAHG 1443

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                + S+SPDS+ +   S+    + + +   + S    + +  +   +   +SP   LI
Sbjct: 1444 QGLTAISFSPDSTIMASASE---DKTVKLWNLDSSLLHTL-EGHQDQVWGVSFSPDSKLI 1499

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            A          + +   DG+  + L      +   ++SP G+ +  +     D   KL+
Sbjct: 1500 ASASADKT---VKLWDLDGTLVKTLEGHQDKVWGVSFSPDGKQIASASN---DGTVKLW 1552



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 86/228 (37%), Gaps = 24/228 (10%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G   R         +    FSP+ Q++A  + D  + ++++  D       K +   R+ 
Sbjct: 1102 GVRERNRLKGHRDWVRSVTFSPDGQRIASGSRD--NTIKLWRKD---GTLLKTLRGHRAG 1156

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQ 315
            I +  FS +G+    S  +D+ + ++  D    +     +    +        +SP+   
Sbjct: 1157 IQSVSFSQDGQMLA-SGSEDKTVKLWRKD---GSLIMTLDGPHGHTKTVHCVRFSPNRQM 1212

Query: 316  IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            I   S+    + + +   +G+    ++     S      SP G LIA          I +
Sbjct: 1213 IASASE---DKTVKLWSKDGALLHTLT-GHSDSVLGVSISPNGQLIASASKDKT---IKL 1265

Query: 376  MKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             ++DG+  +        + +  +SP G+++  +     D   KL+  +
Sbjct: 1266 WRRDGTLLKTWQAHTKPVVSVRFSPDGKTIASAST---DNTVKLWQTN 1310



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 73/195 (37%), Gaps = 19/195 (9%)

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             ++          R   R+   R  + +  FS +G+R   S  +D  + ++  D      
Sbjct: 1091 RVVTALQQAVYGVRERNRLKGHRDWVRSVTFSPDGQRIA-SGSRDNTIKLWRKD--GTLL 1147

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV- 353
            + L        S S+S D   +   S+    + + + + +GS    ++ D    +   V 
Sbjct: 1148 KTLRGHRAGIQSVSFSQDGQMLASGSE---DKTVKLWRKDGSLI--MTLDGPHGHTKTVH 1202

Query: 354  ---WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRK 409
               +SP   +IA          + +  KDG+    L   S+ +   + SP+G+ +  + K
Sbjct: 1203 CVRFSPNRQMIASASEDKT---VKLWSKDGALLHTLTGHSDSVLGVSISPNGQLIASASK 1259

Query: 410  KDGDTGSKLYSIDLN 424
               D   KL+  D  
Sbjct: 1260 ---DKTIKLWRRDGT 1271


>gi|262197114|ref|YP_003268323.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haliangium ochraceum DSM 14365]
 gi|262080461|gb|ACY16430.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haliangium ochraceum DSM 14365]
          Length = 695

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 89/215 (41%), Gaps = 8/215 (3%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-D 232
              I +V+++   G  ++ +  ++  G   R            P ++P+ Q++AY++   
Sbjct: 164 AGAIYYVADTG--GDEQHQIWRLEL-GTGARTQLSQPGTRNMPPLWAPSGQRMAYSSNAR 220

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-IYSVDLQS 291
           ++    V++ D +   A K +   +    A  +S++  + +I          +  +DL S
Sbjct: 221 NQRDFDVWVGDGKDPAAAKLVAEAKGWWHAIDWSADESKLIIGEYISANHSVLRVLDLAS 280

Query: 292 NATERLT-NTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASY 349
            A  R++        +A + P+    V  SDREG+ + LY    +GS  + ++ D   + 
Sbjct: 281 GAITRISPEGKATYSNARFGPNGRVYV-TSDREGEFETLYETDLSGSTWRPLTADIPWNV 339

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                SP G  +AFT        + +M     + R
Sbjct: 340 EGMDLSPDGRSLAFTVNQEGFSTLYLMDTRSRRIR 374



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 90/244 (36%), Gaps = 21/244 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMIL 261
            R      D+ +    F P      Y   D     +  +    +    + ++    +  +
Sbjct: 143 ARTQLTFLDEPVAASGFVPGSAGAIYYVADTGGDEQHQIWRLELGTGARTQLSQPGTRNM 202

Query: 262 APRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTL-----FINISASYSPDSS 314
            P ++ +G+R   S   +     D++  D +  A  +L          I+    +S D S
Sbjct: 203 PPLWAPSGQRMAYSSNARNQRDFDVWVGDGKDPAAAKLVAEAKGWWHAID----WSADES 258

Query: 315 QIV---FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +++   + S       L V+        RIS + +A+Y +  + P G +   +   GE  
Sbjct: 259 KLIIGEYIS--ANHSVLRVLDLASGAITRISPEGKATYSNARFGPNGRVYVTSDREGEFE 316

Query: 372 AIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            +      GS  R L  D   N++    SP GRSL F+  ++G +   LY +D   R   
Sbjct: 317 TLYETDLSGSTWRPLTADIPWNVEGMDLSPDGRSLAFTVNQEGFST--LYLMDTRSRRIR 374

Query: 430 LINT 433
            +  
Sbjct: 375 PVPG 378


>gi|153806662|ref|ZP_01959330.1| hypothetical protein BACCAC_00932 [Bacteroides caccae ATCC 43185]
 gi|149131339|gb|EDM22545.1| hypothetical protein BACCAC_00932 [Bacteroides caccae ATCC 43185]
          Length = 700

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 88/276 (31%), Gaps = 61/276 (22%)

Query: 218 RFSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+ +K+AY     +  +    R   +        ++I           +   G +  
Sbjct: 59  AVSPDGKKIAYTVAYYSVPENKSNREVFVMNADGSDNQQITRTPYQENEVTWIKGGTKLA 118

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-------- 325
                + +  +Y ++   +  ++LTN        S SPD  +++F S  + K        
Sbjct: 119 FLSNDNGSSQLYEMNPDGSERKQLTNYDGDIEGYSISPDGKKLLFISQVKTKESTADKYP 178

Query: 326 -------------------------EQLYVMQSNGSDQKRISQDKEASYFDP-------- 352
                                       ++   +G+    +    E   ++         
Sbjct: 179 DLPKATGIIVTDLMYKHWDEWVTTAPHPFIADFDGNGISNVVDILEGEPYESPMKPWGGI 238

Query: 353 ---VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSP 399
               W+   D +A+T                I V   +  + + + E+       P +SP
Sbjct: 239 EQLAWNTTSDKVAYTCRKKTGLEYAISTNSDIYVYDLNTKETKNITEENKGYDTNPQYSP 298

Query: 400 SGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLIN 432
            G+ + + S ++DG     ++L+ ++L    +  ++
Sbjct: 299 DGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVS 334



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 93/280 (33%), Gaps = 67/280 (23%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISV------QKD 279
           T D     +V +  + I    KR+          I     S +GK+   +V      +  
Sbjct: 21  TKDAGKTDQVLIEKSNIKIEGKRMTPEALWAMGRIGGFAVSPDGKKIAYTVAYYSVPENK 80

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +++ ++   +  +++T T +     ++    +++ F S+  G  QLY M  +GS++K
Sbjct: 81  SNREVFVMNADGSDNQQITRTPYQENEVTWIKGGTKLAFLSNDNGSSQLYEMNPDGSERK 140

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK----------------------------- 370
           +++ + +        SP G  + F      K                             
Sbjct: 141 QLT-NYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTDLMYKHWDEW 199

Query: 371 ----FAIGVMKKDGSQERLLVEDSNLQAPTWSPS--------------GRSLIFS-RKKD 411
                   +   DG+    +V D     P  SP                  + ++ RKK 
Sbjct: 200 VTTAPHPFIADFDGNGISNVV-DILEGEPYESPMKPWGGIEQLAWNTTSDKVAYTCRKKT 258

Query: 412 G-----DTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           G      T S +Y  DLN +    I      Y ++PQ+  
Sbjct: 259 GLEYAISTNSDIYVYDLNTKETKNITEENKGYDTNPQYSP 298



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 51/320 (15%), Positives = 114/320 (35%), Gaps = 67/320 (20%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG++ + +T +  Q      +     K+A+ + D+    ++Y 
Sbjct: 74  YSVPENKSNREVFVMNADGSDNQQITRTPYQENEV-TWIKGGTKLAFLSNDNGSS-QLYE 131

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------------- 278
           M+       K++ N+   I     S +GK+ L   Q                        
Sbjct: 132 MNPD-GSERKQLTNYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTD 190

Query: 279 ----------DEAMDIYSVDLQSNATERLTN-------------TLFINISASYSPDSSQ 315
                       A   +  D   N    + +                I    +++  S +
Sbjct: 191 LMYKHWDEWVTTAPHPFIADFDGNGISNVVDILEGEPYESPMKPWGGIE-QLAWNTTSDK 249

Query: 316 IVFE-SDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + +    + G          +YV   N  + K I+++ +    +P +SP G  IA+    
Sbjct: 250 VAYTCRKKTGLEYAISTNSDIYVYDLNTKETKNITEENKGYDTNPQYSPDGKYIAWQSME 309

Query: 368 GEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            + +      + +M  +  ++R + +  +SN+ A  W    +++ F+    G+  S++Y+
Sbjct: 310 RDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFVWGADAKTIYFTGVWHGE--SQIYA 367

Query: 421 IDLNGRNETLINTPAYASDP 440
           ++L   +   I +  Y  + 
Sbjct: 368 LNLANDSVKAITSGMYDYEG 387


>gi|75909101|ref|YP_323397.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75702826|gb|ABA22502.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 1714

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 107/276 (38%), Gaps = 28/276 (10%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG-DFNSRILFVSE--SVVSGIIKN 191
            D +         +   WR       D++        G D+ + I F  +  ++ +     
Sbjct: 1369 DGRTFASGSRDKTVTLWRW------DEVLLRNPNGDGNDWVTSISFSPDGETLAAASRDQ 1422

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            ++ ++ R G  +  +       ++   +SPNQQ +A A+ D      V L + R  +   
Sbjct: 1423 TVKILSRQGK-LLNIFKGHTGSIWGVAWSPNQQMIASASKDK----TVKLWN-RDGKLLH 1476

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYS 310
             +   +  +LA  +SS+ +    S  KD+ + I+S D        +       ++  S+S
Sbjct: 1477 TLQGHQDAVLAVAWSSDSQVIA-SASKDKMVKIWSQD---GQLLHILQGHTDAVNWVSFS 1532

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            PD   +   SD      + +   +G     + ++         WSP G ++A     G  
Sbjct: 1533 PDGKILASVSD---DTTVKLWNRDGQLLHTL-KEHSRRVNGVAWSPDGQIVASASIDGT- 1587

Query: 371  FAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
              + +  +DGS  R L  D +   + ++SP G+ L 
Sbjct: 1588 --VKLWNRDGSLLRNLPGDGDSFISVSFSPDGKMLA 1621



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 94/248 (37%), Gaps = 25/248 (10%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ S     ++    RDG  ++      D  +    +SPN + +A A++D      + L
Sbjct: 1248 QTLASVGADKNINFWSRDGQPLKTW-KGHDDAILGVAWSPNGEILATASFDK----TIKL 1302

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             + R     K +    + + A  FS NG+    S   D  + ++S       T +     
Sbjct: 1303 WN-RQGNLLKTLSGHTAGVTAVTFSPNGQTIA-SASIDATLKLWSPGGLLLGTLK--GHN 1358

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGD 359
                S S+SPD       S R+    L+       +    + + + + +     +SP G+
Sbjct: 1359 SWVNSVSFSPDGRTFASGS-RDKTVTLWRWD----EVLLRNPNGDGNDWVTSISFSPDGE 1413

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +A          + ++ + G    +      ++    WSP+ + +  + K   D   KL
Sbjct: 1414 TLAAASRDQT---VKILSRQGKLLNIFKGHTGSIWGVAWSPNQQMIASASK---DKTVKL 1467

Query: 419  YSIDLNGR 426
            +  + +G+
Sbjct: 1468 W--NRDGK 1473



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 85/238 (35%), Gaps = 23/238 (9%)

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             +  +    FSP+ +   +A+   +  + ++  D  + R P   G+    + +  FS +G
Sbjct: 1357 HNSWVNSVSFSPDGR--TFASGSRDKTVTLWRWDEVLLRNPN--GDGNDWVTSISFSPDG 1412

Query: 270  KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +    +  +D+ + I  +  Q                 ++SP+   I   S    K++  
Sbjct: 1413 ETLA-AASRDQTVKI--LSRQGKLLNIFKGHTGSIWGVAWSPNQQMIASAS----KDKTV 1465

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-E 388
             + +         Q  + +     WS    +IA          + +  +DG    +L   
Sbjct: 1466 KLWNRDGKLLHTLQGHQDAVLAVAWSSDSQVIASASKDK---MVKIWSQDGQLLHILQGH 1522

Query: 389  DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-----GRNETLINTPAYASDPQ 441
               +   ++SP G+ L        DT  KL++ D         +   +N  A++ D Q
Sbjct: 1523 TDAVNWVSFSPDGKILASVSD---DTTVKLWNRDGQLLHTLKEHSRRVNGVAWSPDGQ 1577



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 72/210 (34%), Gaps = 16/210 (7%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G             +    FSP+   +A A+ D+     + L           +    ++
Sbjct: 1101 GVREYNRLDGHTAGVNSAVFSPDGSLIASASADN----TINLWRND-GSLINTLSKHTNV 1155

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + +  FS +G     S  +D+ + ++  +        L     +  +AS+SPD S I   
Sbjct: 1156 VNSVNFSPDGLLIA-SASQDKTVKLW--NRVGQLVTTLQGHRDVVNNASFSPDGSLIASA 1212

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            S     + + +    G   K +S     +     W+P G  +A     G    I    +D
Sbjct: 1213 SS---DKTVKLWSREGKLLKTLS-GHNDAVLGIAWTPDGQTLASV---GADKNINFWSRD 1265

Query: 380  GSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
            G   +     D  +    WSP+G  L  + 
Sbjct: 1266 GQPLKTWKGHDDAILGVAWSPNGEILATAS 1295



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 74/204 (36%), Gaps = 16/204 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S      + +  +DG  +  L    D + +   FSP+ + +A  + D      V L + R
Sbjct: 1499 SASKDKMVKIWSQDGQLLHILQGHTDAVNWV-SFSPDGKILASVSDDT----TVKLWN-R 1552

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +    +      +    +S +G + + S   D  + ++  +   +    L       I
Sbjct: 1553 DGQLLHTLKEHSRRVNGVAWSPDG-QIVASASIDGTVKLW--NRDGSLLRNLPGDGDSFI 1609

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S S+SPD   +   SD    +++ +    G+    +  DK+       +SP   ++A   
Sbjct: 1610 SVSFSPDGKMLAANSD----DKIRLWNQKGTLLMVLKGDKD-ELTSVTFSPDSQILA--A 1662

Query: 366  FSGEKFAIGVMKKDGSQERLLVED 389
              G    I     D   E LLV  
Sbjct: 1663 GGGNGKVIFQNLADIKLENLLVRG 1686



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 99/259 (38%), Gaps = 26/259 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ + +R G  +  L   RD ++    FSP+   +A A+ D    ++++   +R
Sbjct: 1170 SASQDKTVKLWNRVGQLVTTLQGHRD-VVNNASFSPDGSLIASASSD--KTVKLW---SR 1223

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +  K +      +L   ++ +G+    SV  D+ ++ +S D      +         +
Sbjct: 1224 EGKLLKTLSGHNDAVLGIAWTPDGQTLA-SVGADKNINFWSRD--GQPLKTWKGHDDAIL 1280

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              ++SP+   +   S     + + +    G+  K +S    A      +SP G  IA   
Sbjct: 1281 GVAWSPNGEILATASF---DKTIKLWNRQGNLLKTLS-GHTAGVTAVTFSPNGQTIASAS 1336

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                   +           L   +S + + ++SP GR+  F+      T + L+  D   
Sbjct: 1337 IDAT-LKLW-SPGGLLLGTLKGHNSWVNSVSFSPDGRT--FASGSRDKTVT-LWRWD--- 1388

Query: 426  RNETLINTP-AYASDPQWV 443
              E L+  P    +D  WV
Sbjct: 1389 --EVLLRNPNGDGND--WV 1403



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 69/201 (34%), Gaps = 14/201 (6%)

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            Q+ +    Y  E +           R   R+    + + +  FS +G     S   D  +
Sbjct: 1078 QRAIWVDPYTREQVQTALYQAVVGVREYNRLDGHTAGVNSAVFSPDGSLIA-SASADNTI 1136

Query: 283  DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +++  D   +    L+    +  S ++SPD   I   S     ++   + +         
Sbjct: 1137 NLWRND--GSLINTLSKHTNVVNSVNFSPDGLLIASASQ----DKTVKLWNRVGQLVTTL 1190

Query: 343  QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSG 401
            Q       +  +SP G LIA          + +  ++G   + L   ++ +    W+P G
Sbjct: 1191 QGHRDVVNNASFSPDGSLIASASSDKT---VKLWSREGKLLKTLSGHNDAVLGIAWTPDG 1247

Query: 402  RSLIFSRKKDGDTGSKLYSID 422
            ++L        D     +S D
Sbjct: 1248 QTLA---SVGADKNINFWSRD 1265


>gi|319427197|gb|ADV55271.1| peptidase S41 [Shewanella putrefaciens 200]
          Length = 1094

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 49/297 (16%), Positives = 112/297 (37%), Gaps = 36/297 (12%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---- 228
           +  R+ F+S+S  +      L     DG++ + LT  +D  +   R   +Q KV +    
Sbjct: 226 WQERLYFISDSDGNDN----LWSSALDGSDAKQLTQFKDWQVRGARM--DQGKVVFQLGA 279

Query: 229 ------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                      + +L + L     +R    + +      +   +  G + +I+ +     
Sbjct: 280 DIHVFDIAAAKDSLLNIELTSDFAERREHWVKDPMDYASSTNLAPAGDKVVITAR----S 335

Query: 283 DIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKR 340
            +    +  +   ++     +    A  S D   +   SD  G++++    ++GS   K+
Sbjct: 336 HVAIAGVDGSRLVQVALPGTYRVREAVLSQDGKSVYAISDMTGQQEICQFPADGSSGAKQ 395

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
           +++D          S  G  IA     G    + ++    +  + ++ +     P     
Sbjct: 396 LTKDGHTLRMSLNLSSDGRFIAHDDNDG---NVWLLDLKKNTNQKIITNGEGLGPYADIR 452

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLIN------TPAYASDPQWVGFM 446
           WS   R +  ++ + G    ++    ++  R ETL +      +P ++SD QW+ F+
Sbjct: 453 WSSDSRFIALTKSEIGKQRPQIVLYSVDENRAETLTSDKYESYSPTFSSDGQWLYFL 509



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 67/199 (33%), Gaps = 15/199 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P   KV            V +      R  +        +     S +GK         
Sbjct: 323 APAGDKVVITARSH-----VAIAGVDGSRLVQVALPGTYRVREAVLSQDGKSVYAISDMT 377

Query: 280 EAMDIYSVDLQSN-ATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              +I       +   ++LT +   + +S + S D     F +  +    ++++    + 
Sbjct: 378 GQQEICQFPADGSSGAKQLTKDGHTLRMSLNLSSDGR---FIAHDDNDGNVWLLDLKKNT 434

Query: 338 QKRISQDKEA--SYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVED-SNL 392
            ++I  + E    Y D  WS     IA TK     ++  I +   D ++   L  D    
Sbjct: 435 NQKIITNGEGLGPYADIRWSSDSRFIALTKSEIGKQRPQIVLYSVDENRAETLTSDKYES 494

Query: 393 QAPTWSPSGRSLIFSRKKD 411
            +PT+S  G+ L F   + 
Sbjct: 495 YSPTFSSDGQWLYFLSNRQ 513



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/283 (17%), Positives = 110/283 (38%), Gaps = 27/283 (9%)

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKFFSSPAS 150
           ++   + +F+DW   GA++   G+V+     +L  +  ++D+   K  ++  +  S  A 
Sbjct: 250 SDAKQLTQFKDWQVRGARMD-QGKVVF----QLGADIHVFDIAAAKDSLLNIELTSDFAE 304

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R+            +       +S  L  +   V    ++ + +   DG+ +  +    
Sbjct: 305 RRE----------HWVKDPMDYASSTNLAPAGDKVVITARSHVAIAGVDGSRLVQVALPG 354

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNG 269
              + E   S + + V YA  D      +           K++  +  ++ ++   SS+G
Sbjct: 355 TYRVREAVLSQDGKSV-YAISDMTGQQEICQFPADGSSGAKQLTKDGHTLRMSLNLSSDG 413

Query: 270 KRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISA--SYSPDSSQIVFESDREGK- 325
           +        D   +++ +DL+ N  ++ +TN   +   A   +S DS  I       GK 
Sbjct: 414 RFIA---HDDNDGNVWLLDLKKNTNQKIITNGEGLGPYADIRWSSDSRFIALTKSEIGKQ 470

Query: 326 -EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             Q+ +   + +  + ++ DK  SY  P +S  G  + F    
Sbjct: 471 RPQIVLYSVDENRAETLTSDKYESY-SPTFSSDGQWLYFLSNR 512



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 58/143 (40%), Gaps = 13/143 (9%)

Query: 188 IIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
             +  +C    DG+   + LT     +      S + + +A+   D      V+L+D + 
Sbjct: 377 TGQQEICQFPADGSSGAKQLTKDGHTLRMSLNLSSDGRFIAHDDNDG----NVWLLDLKK 432

Query: 247 DRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNT 300
           +   K I N     L P    R+SS+ +   ++  +       I    +  N  E LT+ 
Sbjct: 433 NTNQKIITNGEG--LGPYADIRWSSDSRFIALTKSEIGKQRPQIVLYSVDENRAETLTSD 490

Query: 301 LFINISASYSPDSSQIVFESDRE 323
            + + S ++S D   + F S+R+
Sbjct: 491 KYESYSPTFSSDGQWLYFLSNRQ 513



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 26/206 (12%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           + +    AP      +  + + + D    +++  L   A  RLT+     + A+ S D  
Sbjct: 29  SNQGYYRAPALH--NQTLVFTAEGD----LWTQTLGQKAATRLTSLPAEELGATISADGK 82

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            + + ++ EG  ++YV+   G   KR+S +  +      W+ +G+ I ++  +G   A  
Sbjct: 83  WVAYVANYEGASEVYVIPITGGVAKRVSFE-NSRVRVQGWTAKGE-ILYSTDTGFGPANN 140

Query: 375 VMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRK-----------KDGDTGSKLYS 420
            M +    + L   D   ++            + F+R              G    +L+ 
Sbjct: 141 WMLRSVDPQTLTTTDLPLADAVEGVIDDRNEYVYFTRFGLQVTGDNAKVYRGGAKGELWR 200

Query: 421 IDLNGRNETLI---NTPAYASDPQ-W 442
             L  + E  +           P  W
Sbjct: 201 FKLGSKTEAQLLSGQHDGSVRQPMLW 226



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 68/209 (32%), Gaps = 22/209 (10%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              T   +A  R+ +  +  L    S++GK        + A ++Y + +     +R++  
Sbjct: 53  WTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVYVIPITGGVAKRVSFE 112

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   ++     +       G    ++++S        +    A   + V   + + 
Sbjct: 113 NSRVRVQGWTAKGEILYSTDTGFGPANNWMLRSVDPQTLTTTDLPLADAVEGVIDDRNEY 172

Query: 361 IAFTK-------------FSGEKFAIGVMKKDGSQERLLV---EDSNLQAPT-WSPSGRS 403
           + FT+               G K  +   K     E  L+    D +++ P  W      
Sbjct: 173 VYFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQ---ER 229

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           L F    DG     L+S  L+G +   + 
Sbjct: 230 LYFISDSDG--NDNLWSSALDGSDAKQLT 256



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 68/213 (31%), Gaps = 25/213 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G        S          S + + VAY   + E    VY++        KR+    S 
Sbjct: 58  GQKAATRLTSLPAEELGATISADGKWVAYVA-NYEGASEVYVIPI-TGGVAKRVSFENSR 115

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQI 316
           +    +++ G   L S           + L+S   + LT T   L   +       +  +
Sbjct: 116 VRVQGWTAKG-EILYSTDTGFGPANNWM-LRSVDPQTLTTTDLPLADAVEGVIDDRNEYV 173

Query: 317 VFES------------DREG-KEQLYVMQSNG-SDQKRISQDKEASYFDPV-WSPQGDLI 361
            F               R G K +L+  +    ++ + +S   + S   P+ W    + +
Sbjct: 174 YFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQ---ERL 230

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            F   S     +     DGS  + L +  + Q 
Sbjct: 231 YFISDSDGNDNLWSSALDGSDAKQLTQFKDWQV 263


>gi|116626668|ref|YP_828824.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229830|gb|ABJ88539.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 845

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 68/201 (33%), Gaps = 8/201 (3%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
               I+     SP+  +VA+   D+     ++L D R     +           P +S +
Sbjct: 577 GPAGIINTLAISPDGSRVAFDMMDESVGSDIWLHDLRRGSDSRFTS---GYYWRPVWSPD 633

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQ 327
           G     S +     + Y   L  +  +++      +    +S D   ++ E  + + +  
Sbjct: 634 GSNVAYSSRGFAQSNAYQKSLGGSQDQKVAAGWVWD----WSSDGRYMIGEILNPKTRRD 689

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           L+V    G  +       E    +  +SP    +A+      +F + V       ER  V
Sbjct: 690 LWVTPLFGDRKAFAYLQTEFDEREGKFSPDVHWVAYASDDTGRFEVYVQSFPSPSERFQV 749

Query: 388 EDSNLQAPTWSPSGRSLIFSR 408
                  P WS  G+ L F  
Sbjct: 750 SSGGGDFPVWSRDGKELFFVS 770



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 79/240 (32%), Gaps = 21/240 (8%)

Query: 211 DQILFEPRFSPNQQKV-AYATYDDEDILRVYLMDTRIDRAPKRIGNFR--SMILAPRFSS 267
           D +    R+  +Q  V AY +             T  DR+ K +  F    +I     S 
Sbjct: 535 DNMQGWTRWGVSQNGVLAYTSGAIG-----LEQLTWFDRSGKMLAAFGPAGIINTLAISP 589

Query: 268 NGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +G R    +  +    DI+  DL+  +  R T+  +      +SPD S + + S    + 
Sbjct: 590 DGSRVAFDMMDESVGSDIWLHDLRRGSDSRFTSGYYW--RPVWSPDGSNVAYSSRGFAQS 647

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL-IAFTKFSGEKFAIGVMKK--DGSQE 383
             Y     GS  ++++           WS  G   I        +  + V     D    
Sbjct: 648 NAYQKSLGGSQDQKVAAGWVWD-----WSSDGRYMIGEILNPKTRRDLWVTPLFGDRKAF 702

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             L  + + +   +SP    + ++    G    ++Y       +E    +      P W 
Sbjct: 703 AYLQTEFDEREGKFSPDVHWVAYASDDTGRF--EVYVQSFPSPSERFQVSSGGGDFPVWS 760



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 58/189 (30%), Gaps = 19/189 (10%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
               P  S +G+        +    I+  +L S     L  T     + ++SPDS  I F
Sbjct: 317 WNAPPAVSPDGRSVAFGAVVEGKSGIWVRELDSAGARPLPETEEA-TTLAWSPDSRSIAF 375

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                    L  +       + I       +    W    D I FT   G       ++ 
Sbjct: 376 ---MAPNRTLKRVDLASGRARTICDLPNG-FGGASWGAN-DTIVFTDPKGT----WRVRA 426

Query: 379 DGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG----RNET 429
            G    ++     V +     P + P GR  + +        S +Y+ D+      RN  
Sbjct: 427 SGGIPSVVAALDPVTEVWHTNPWFLPDGRHFLIAITGKKAEDSAIYACDIESKDQARNRR 486

Query: 430 LINTPAYAS 438
            I     AS
Sbjct: 487 RILASGLAS 495



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 39/115 (33%), Gaps = 13/115 (11%)

Query: 338 QKRIS-------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +R++                P  SP G  +AF      K  I V + D +  R L E  
Sbjct: 300 PRRVTLQLPLPQNGTLYWNAPPAVSPDGRSVAFGAVVEGKSGIWVRELDSAGARPLPETE 359

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
                 WSP  RS+ F           L  +DL +GR  T+ + P       W  
Sbjct: 360 EATTLAWSPDSRSIAFMA-----PNRTLKRVDLASGRARTICDLPNGFGGASWGA 409



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 10/177 (5%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                    P  SP+ + VA+    +     +++ +     A        +  LA  +S 
Sbjct: 312 NGTLYWNAPPAVSPDGRSVAFGAVVEGKS-GIWVRELDSAGARPLPETEEATTLA--WSP 368

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           + +             +  VDL S     + +       AS+  +   IVF  D +G  +
Sbjct: 369 DSRSIAFMA---PNRTLKRVDLASGRARTICDLPNGFGGASWGAN-DTIVFT-DPKGTWR 423

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAIGVMKKDGSQ 382
           +       S    +    E  + +P + P G   LIA T    E  AI     +   
Sbjct: 424 VRASGGIPSVVAALDPVTEVWHTNPWFLPDGRHFLIAITGKKAEDSAIYACDIESKD 480



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 7/109 (6%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           TL+ N   + SPD   + F +  EGK  ++V + + +  + + + +EA+     WSP   
Sbjct: 314 TLYWNAPPAVSPDGRSVAFGAVVEGKSGIWVRELDSAGARPLPETEEATTL--AWSPDSR 371

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFS 407
            IAF   +     +  +     + R + +  N     +W  +  +++F+
Sbjct: 372 SIAFMAPNRT---LKRVDLASGRARTICDLPNGFGGASWGAN-DTIVFT 416



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 3/109 (2%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           G   D++S   ++   +++   +  L V    G    +     +    E +FSP+   VA
Sbjct: 665 GWVWDWSSDGRYMIGEILNPKTRRDLWVTPLFGDRKAFAYLQTEFDEREGKFSPDVHWVA 724

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           YA+ D      VY+          ++ +       P +S +GK      
Sbjct: 725 YASDDTGR-FEVYVQSFPSPSERFQVSSGGGD--FPVWSRDGKELFFVS 770


>gi|166364492|ref|YP_001656765.1| WD-40 repeat-containing serine/threonin protein kinase [Microcystis
           aeruginosa NIES-843]
 gi|166086865|dbj|BAG01573.1| serine/threonine protein kinase with WD40 repeats [Microcystis
           aeruginosa NIES-843]
          Length = 758

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 85/228 (37%), Gaps = 30/228 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +T +   I+    +SP+ + +A  + D      + + DT+       +      + +  +
Sbjct: 547 ITVNSRHIVNSVAYSPDGRYLASGSADK----TIKIWDTKTGTELSTLTGHSEAVNSVAY 602

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNAT---------ERLTNTLFINISASYSPDSSQI 316
           S +G+    S   DE + I+  D+++N           + +T  +   I  +YSP+   +
Sbjct: 603 SPDGRYLA-SASSDETIKIW--DVKNNKELNTFIYNYSKTIT-GVGYLIRIAYSPNGRYL 658

Query: 317 VFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                  G     + +      ++         S     +SP G  +A +  S     I 
Sbjct: 659 A-----SGYLNGTIQLWDVKTGNKVHTLTGHSGSVIPLAYSPDGRYLA-SGSSDGTIKIW 712

Query: 375 VMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +   G + R L   S+ + +  +SP GR L       GD   K++ +
Sbjct: 713 EV-ATGKELRTLTGHSDTVWSVVYSPDGRYLA---SGSGDKNIKIWRV 756



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 64/229 (27%), Gaps = 31/229 (13%)

Query: 112 VTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           +   V      R           ++WD K   ++          +   +A        + 
Sbjct: 554 IVNSVAYSPDGRYLASGSADKTIKIWDTKTGTEL--STLTGHSEAVNSVA---YSPDGRY 608

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +     D   +I  V  +        +              T +    L    +SPN + 
Sbjct: 609 LASASSDETIKIWDVKNNKELNTFIYNY-----------SKTITGVGYLIRIAYSPNGRY 657

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A    +      + L D +       +      ++   +S +G+    S   D  + I+
Sbjct: 658 LASGYLNG----TIQLWDVKTGNKVHTLTGHSGSVIPLAYSPDGRYLA-SGSSDGTIKIW 712

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            V         LT       S  YSPD   +   S   G + + + +  
Sbjct: 713 EV-ATGKELRTLTGHSDTVWSVVYSPDGRYLASGS---GDKNIKIWRVG 757



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 92/292 (31%), Gaps = 64/292 (21%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM------ 259
                 + +    +SP+ + +A  +  D     + + D    + P  + N  S+      
Sbjct: 415 TFTGHSEAVNSVAYSPDGRFLASVSNYD----SIKIWDIENGKEPLNLANNSSLINLVAY 470

Query: 260 ---------------------------ILAPRFSSNGKRAL-----ISVQKDEAMDIYSV 287
                                      +L+  +S +G+        +  Q +E  +  SV
Sbjct: 471 NPLAVIILDGIVSPLPLQQQVELNLNKVLSVAYSPDGRYLASGGGTLLTQGEEQGEEQSV 530

Query: 288 DL-------QSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           D+       +      +T N+  I  S +YSPD   +   S     + + +  +    + 
Sbjct: 531 DIIKIWDIERRKELFPITVNSRHIVNSVAYSPDGRYLASGS---ADKTIKIWDTKTGTEL 587

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-------GSQERLLVEDSNL 392
                   +     +SP G  +A +  S E   I  +K +        +  + +     L
Sbjct: 588 STLTGHSEAVNSVAYSPDGRYLA-SASSDETIKIWDVKNNKELNTFIYNYSKTITGVGYL 646

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               +SP+GR L  S   +G    +L+ +    +  TL           +  
Sbjct: 647 IRIAYSPNGRYLA-SGYLNGT--IQLWDVKTGNKVHTLTGHSGSVIPLAYSP 695


>gi|253568602|ref|ZP_04846013.1| prolyl oligopeptidase [Bacteroides sp. 1_1_6]
 gi|298387392|ref|ZP_06996945.1| prolyl oligopeptidase family protein [Bacteroides sp. 1_1_14]
 gi|251842675|gb|EES70755.1| prolyl oligopeptidase [Bacteroides sp. 1_1_6]
 gi|298260061|gb|EFI02932.1| prolyl oligopeptidase family protein [Bacteroides sp. 1_1_14]
          Length = 699

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 51/320 (15%), Positives = 107/320 (33%), Gaps = 67/320 (20%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG++ R +T +  Q      +     K+A+ + D+       +
Sbjct: 74  YSVPENKSNREVFVMNADGSDNRQITRTPYQENEV-TWIKGGTKLAFLSNDNGSSQLYEM 132

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------------- 278
                 R  K++ N+   I     S +GK+ L   Q                        
Sbjct: 133 NPDGSGR--KQLTNYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTD 190

Query: 279 ----------DEAMDIYSVDLQSNATERLTN-------------TLFINISASYSPDSSQ 315
                       A   +  D   N    + +                I    +++  S +
Sbjct: 191 LMYKHWDEWVTTAPHPFVADFDGNGISNIVDILEGEPYESPMKPWGGIE-QLAWNTTSDK 249

Query: 316 IVFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + +                 +YV   N      I+++ +    +P +SP G  IA+    
Sbjct: 250 VAYTCRKKTGLEYAVSTNSDIYVYDLNTKKTDNITEENKGYDTNPQYSPDGKYIAWQSME 309

Query: 368 GEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            + +      + +M  +  ++R + +  +SN+ A  W    +++ F+    G+T  ++YS
Sbjct: 310 RDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFVWGNDAKTIYFTGVWHGET--QIYS 367

Query: 421 IDLNGRNETLINTPAYASDP 440
           +DL   +   I +  Y  + 
Sbjct: 368 LDLTNDSVKAITSGMYDYEG 387



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 91/280 (32%), Gaps = 67/280 (23%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISV------QKD 279
           T D     +V +  + I    KR+          I     S +GK+   +V      +  
Sbjct: 21  TKDAGKTDQVLIEKSDIKIEGKRMTPEALWAMGRIGGLAVSPDGKKIAYTVAYYSVPENK 80

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +++ ++   +   ++T T +     ++    +++ F S+  G  QLY M  +GS +K
Sbjct: 81  SNREVFVMNADGSDNRQITRTPYQENEVTWIKGGTKLAFLSNDNGSSQLYEMNPDGSGRK 140

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK----------------------------- 370
           +++ + +        SP G  + F      K                             
Sbjct: 141 QLT-NYDGDIEGYSISPDGKKLLFISQVKTKESTADKYPDLPKATGIIVTDLMYKHWDEW 199

Query: 371 ----FAIGVMKKDGSQERLLVEDSNLQAPTWSPS--------------GRSLIFS-RKKD 411
                   V   DG+    +V D     P  SP                  + ++ RKK 
Sbjct: 200 VTTAPHPFVADFDGNGISNIV-DILEGEPYESPMKPWGGIEQLAWNTTSDKVAYTCRKKT 258

Query: 412 G-----DTGSKLYSIDLNGRNETLIN--TPAYASDPQWVG 444
           G      T S +Y  DLN +    I      Y ++PQ+  
Sbjct: 259 GLEYAVSTNSDIYVYDLNTKKTDNITEENKGYDTNPQYSP 298



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 87/276 (31%), Gaps = 61/276 (22%)

Query: 218 RFSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+ +K+AY     +  +    R   +        ++I           +   G +  
Sbjct: 59  AVSPDGKKIAYTVAYYSVPENKSNREVFVMNADGSDNRQITRTPYQENEVTWIKGGTKLA 118

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-------- 325
                + +  +Y ++   +  ++LTN        S SPD  +++F S  + K        
Sbjct: 119 FLSNDNGSSQLYEMNPDGSGRKQLTNYDGDIEGYSISPDGKKLLFISQVKTKESTADKYP 178

Query: 326 -------------------------EQLYVMQSNGSDQKRISQDKEASYFDP-------- 352
                                       +V   +G+    I    E   ++         
Sbjct: 179 DLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVDILEGEPYESPMKPWGGI 238

Query: 353 ---VWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSP 399
               W+   D +A+T                I V   +  +   + E+       P +SP
Sbjct: 239 EQLAWNTTSDKVAYTCRKKTGLEYAVSTNSDIYVYDLNTKKTDNITEENKGYDTNPQYSP 298

Query: 400 SGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLIN 432
            G+ + + S ++DG     ++L+ ++L    +  ++
Sbjct: 299 DGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVS 334



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/322 (15%), Positives = 110/322 (34%), Gaps = 64/322 (19%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           +++ F+S    +    + L  M+ DG+  + LT     I      SP+ +K+ + +    
Sbjct: 115 TKLAFLS----NDNGSSQLYEMNPDGSGRKQLTNYDGDIEGY-SISPDGKKLLFISQVKT 169

Query: 232 ---------DDEDILRVYLMDTRIDRAPKRIG--------NFRSMILA------------ 262
                    D      + + D       + +         +F    ++            
Sbjct: 170 KESTADKYPDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNGISNIVDILEGEPYE 229

Query: 263 ----P-------RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTN-TLF 302
               P        +++   +   + +K            DIY  DL +  T+ +T     
Sbjct: 230 SPMKPWGGIEQLAWNTTSDKVAYTCRKKTGLEYAVSTNSDIYVYDLNTKKTDNITEENKG 289

Query: 303 INISASYSPDSSQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + +  YSPD   I ++S +R+G      +L++M     +++ +S+  E++    VW   
Sbjct: 290 YDTNPQYSPDGKYIAWQSMERDGYEADLNRLFIMNLETGEKRFVSKAFESNVDAFVWGND 349

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              I FT     +  I  +       + +           +  G  LI +++     G +
Sbjct: 350 AKTIYFTGVWHGETQIYSLDLTNDSVKAITSGMYDYEGV-ALFGDKLI-AKRHSMSMGDE 407

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           +Y++ L+G    L        D
Sbjct: 408 IYAVALDGSATQLTQENKEIYD 429


>gi|304412325|ref|ZP_07393933.1| WD40-like beta Propeller containing protein [Shewanella baltica
           OS183]
 gi|307306109|ref|ZP_07585854.1| WD40 domain protein beta Propeller [Shewanella baltica BA175]
 gi|304349360|gb|EFM13770.1| WD40-like beta Propeller containing protein [Shewanella baltica
           OS183]
 gi|306910982|gb|EFN41409.1| WD40 domain protein beta Propeller [Shewanella baltica BA175]
          Length = 673

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 54/327 (16%), Positives = 112/327 (34%), Gaps = 66/327 (20%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I+           K S  +   DG + R +T  +   + EP FSP+ + +A+ +  +ED
Sbjct: 48  HIIAPVTEYDLKADKGSTQLWRFDGKHNRAITA-KGLRVSEPVFSPDGKTLAFVSQRNED 106

Query: 236 -ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-------------------- 274
              ++YL+        +R+ +  + + + ++   GK                        
Sbjct: 107 EASQIYLLPMDGPGEAQRLTDIPTGVNSIKW--VGKHLYFISNIFPNQSWEEMKTQLTTD 164

Query: 275 --------------------SVQKDEAMDIYSVDLQSNATERLTNTLF------INISAS 308
                                + +     ++ +  +    E +T             SAS
Sbjct: 165 TDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHELPRSDQSSAS 224

Query: 309 Y--SPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           Y  SP+   I F +     +      +++    G+  + ++ D +A   +P +SP G  +
Sbjct: 225 YDVSPNERWIAFNAYGSENKVDPKIDIFLATIGGNKAENLTADNQAPDLNPSFSPNGKTL 284

Query: 362 AFTKFSGEKF-----AIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDT 414
           AFT+     F      + ++  D  +   L  D +  +   +W+P  +   F    +   
Sbjct: 285 AFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTPDNKG--FYATVEDAA 342

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQ 441
            +++YSID        I      S P 
Sbjct: 343 TNRIYSIDAKNGKVKAITEATDFSQPA 369



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 98/295 (33%), Gaps = 72/295 (24%)

Query: 217 PRFSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  SP  + +      Y    D+   +++  D    +  + I      +  P FS +GK 
Sbjct: 40  PIVSPTGEHIIAPVTEYDLKADKGSTQLWRFD---GKHNRAITAKGLRVSEPVFSPDGKT 96

Query: 272 ALISVQK--DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-------- 320
                Q+  DEA  IY + +      +RLT+      S  +      + F S        
Sbjct: 97  LAFVSQRNEDEASQIYLLPMDGPGEAQRLTDIPTGVNSIKWV--GKHLYFISNIFPNQSW 154

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQ----- 343
                                           D   +  ++ + + G + + I+Q     
Sbjct: 155 EEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHE 214

Query: 344 --DKEASYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLVEDSN--LQA 394
               + S      SP    IAF  +  E        I +    G++   L  D+      
Sbjct: 215 LPRSDQSSASYDVSPNERWIAFNAYGSENKVDPKIDIFLATIGGNKAENLTADNQAPDLN 274

Query: 395 PTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
           P++SP+G++L F+R+K        S+L  +D++ R  T + +      S   W  
Sbjct: 275 PSFSPNGKTLAFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTP 329



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 84/267 (31%), Gaps = 17/267 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            + F+S    +   +     +  D  N             +     ++++ A+       
Sbjct: 141 HLYFISNIFPNQSWEEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAK 200

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-----QKDEAMDIYSVDLQ 290
              V  +         R         +   S N +    +      + D  +DI+   + 
Sbjct: 201 GGNVENITQPAGHELPR---SDQSSASYDVSPNERWIAFNAYGSENKVDPKIDIFLATIG 257

Query: 291 SNATERLT-NTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKRISQD 344
            N  E LT +    +++ S+SP+   + F   +         +L ++  +      ++ D
Sbjct: 258 GNKAENLTADNQAPDLNPSFSPNGKTLAFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSD 317

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S     W+P       T        I  +     + + + E ++   P     G  +
Sbjct: 318 WDRSVSQFSWTPDNKGFYATVEDAATNRIYSIDAKNGKVKAITEATDFSQPAIGKDGELI 377

Query: 405 IFSRKKDGDTGSKLYSID-LNGRNETL 430
                +     ++L SI+  NG+ E L
Sbjct: 378 A--TNQSFLYPARLVSINPRNGKIERL 402



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 68/248 (27%), Gaps = 68/248 (27%)

Query: 260 ILAPRFSSNGKRAL-----ISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +P  S  G+  +       ++ D  +  ++  D        +T          +SPD 
Sbjct: 37  IGSPIVSPTGEHIIAPVTEYDLKADKGSTQLWRFD--GKHNRAITAKGLRVSEPVFSPDG 94

Query: 314 SQIVFESDR--EGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
             + F S R  +   Q+Y++  +G  + +R++ D         W   G  + F       
Sbjct: 95  KTLAFVSQRNEDEASQIYLLPMDGPGEAQRLT-DIPTGVNSIKWV--GKHLYFISNIFPN 151

Query: 367 ------------------------------------SGEKFAIGVMKKDGSQERLLVEDS 390
                                                  +  +  +   G     + + +
Sbjct: 152 QSWEEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPA 211

Query: 391 NLQAPT---------WSPSGRSLIF---SRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             + P           SP+ R + F     +   D    ++   + G     +     A 
Sbjct: 212 GHELPRSDQSSASYDVSPNERWIAFNAYGSENKVDPKIDIFLATIGGNKAENLTADNQAP 271

Query: 439 D--PQWVG 444
           D  P +  
Sbjct: 272 DLNPSFSP 279


>gi|162451903|ref|YP_001614270.1| WD repeat-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161162485|emb|CAN93790.1| WD-repeat protein [Sorangium cellulosum 'So ce 56']
          Length = 1293

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 85/246 (34%), Gaps = 21/246 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + +VS    ++L V D     +          +     SP+ +++  A+ D      + +
Sbjct: 864  QRIVSACRDSTLKVWDLATGQLLSTLEDHSASVTACAISPDGRRIVSASDDG----TLKV 919

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNT 300
                  +    + +  + + A   S +G+R + S   D  + ++  DL +      L + 
Sbjct: 920  WGLATGQLLSTLEDHSASVTACAISPDGRRIV-SASDDGTLKVW--DLATGQLLSTLEDH 976

Query: 301  LFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 + + SPD  +IV  S DR     L V            +   AS      SP G 
Sbjct: 977  SASVTACAISPDGQRIVSASRDRT----LKVWDLATGQLLSTLEGHSASVTACAISPDGQ 1032

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             I    +      + V      Q    +E   +++ A   SP G+ ++      GD   K
Sbjct: 1033 RIVSASWDRT---LKVWDLATGQLLATLEGHSASVAACAISPDGQRVV---SASGDRTLK 1086

Query: 418  LYSIDL 423
            ++    
Sbjct: 1087 VWKTST 1092



 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 76/229 (33%), Gaps = 14/229 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + VVS     +L V D     +          +     SP+ Q++  A  D      + +
Sbjct: 822  QRVVSACRDRTLKVWDLATGQLLSTLEGHSASVTACAISPDGQRIVSACRDS----TLKV 877

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D    +    + +  + + A   S +G+R + S   D  + ++ +         L +  
Sbjct: 878  WDLATGQLLSTLEDHSASVTACAISPDGRRIV-SASDDGTLKVWGL-ATGQLLSTLEDHS 935

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                + + SPD  +IV  SD      L V            +D  AS      SP G  I
Sbjct: 936  ASVTACAISPDGRRIVSASD---DGTLKVWDLATGQLLSTLEDHSASVTACAISPDGQRI 992

Query: 362  AFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSR 408
                       + V      Q    L    +++ A   SP G+ ++ + 
Sbjct: 993  VSASRDRT---LKVWDLATGQLLSTLEGHSASVTACAISPDGQRIVSAS 1038



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 104/319 (32%), Gaps = 38/319 (11%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQII---GKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           R++    DR     ++WD+   + +    G   + +  +       I             
Sbjct: 655 RIVSASDDR---TLKVWDLATGQLLSTLEGHSAWVTACAISPAGQRIVSTSRDRTLKVWD 711

Query: 172 DFNSRILFV----------------SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
               ++L                     +VS     +L V D     +          + 
Sbjct: 712 LATGQLLSTLEGHSASVTACAISPDGRRIVSASWDRTLKVWDLAAGQLLSTLEGHSASVT 771

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               SP+ Q++  A++D      + + D  I +    +    + + A   S +G+R ++S
Sbjct: 772 ACAISPDGQRIVSASWDR----TLKVWDLAIGQLLSALEGHSASVTACAISPDGQR-VVS 826

Query: 276 VQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             +D  + ++  DL +      L        + + SPD  +IV  + R+    L V    
Sbjct: 827 ACRDRTLKVW--DLATGQLLSTLEGHSASVTACAISPDGQRIV-SACRD--STLKVWDLA 881

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNL 392
                   +D  AS      SP G  I      G    + V      Q    +ED  +++
Sbjct: 882 TGQLLSTLEDHSASVTACAISPDGRRIVSASDDGT---LKVWGLATGQLLSTLEDHSASV 938

Query: 393 QAPTWSPSGRSLIFSRKKD 411
            A   SP GR ++ +    
Sbjct: 939 TACAISPDGRRIVSASDDG 957



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 78/231 (33%), Gaps = 18/231 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             +VS     +L V D     +          ++    +P+ +++  A++D      + +
Sbjct: 570 RRIVSASDDRTLKVWDLATGQLLSTLEGHSASIYACAINPDGRRIVSASWDR----TLNV 625

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNT 300
            D    +    +    + + A   S +G+R + S   D  + ++  DL +      L   
Sbjct: 626 WDLATGQLLSTLEGHSASVTACAISPDGQRIV-SASDDRTLKVW--DLATGQLLSTLEGH 682

Query: 301 LFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                + + SP   +IV  S DR     L V            +   AS      SP G 
Sbjct: 683 SAWVTACAISPAGQRIVSTSRDRT----LKVWDLATGQLLSTLEGHSASVTACAISPDGR 738

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSR 408
            I    +      + V      Q    L    +++ A   SP G+ ++ + 
Sbjct: 739 RIVSASWDRT---LKVWDLAAGQLLSTLEGHSASVTACAISPDGQRIVSAS 786



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 70/226 (30%), Gaps = 14/226 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + +VS     +L V D     +          +     SP  Q++   + D      + +
Sbjct: 654 QRIVSASDDRTLKVWDLATGQLLSTLEGHSAWVTACAISPAGQRIVSTSRDR----TLKV 709

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +    +    + + A   S +G+R + S   D  + ++ +         L    
Sbjct: 710 WDLATGQLLSTLEGHSASVTACAISPDGRRIV-SASWDRTLKVWDL-AAGQLLSTLEGHS 767

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               + + SPD  +IV  S       L V            +   AS      SP G  +
Sbjct: 768 ASVTACAISPDGQRIVSAS---WDRTLKVWDLAIGQLLSALEGHSASVTACAISPDGQRV 824

Query: 362 AFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
                      + V      Q    L    +++ A   SP G+ ++
Sbjct: 825 VSACRDRT---LKVWDLATGQLLSTLEGHSASVTACAISPDGQRIV 867



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 87/274 (31%), Gaps = 21/274 (7%)

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R+    + + +Y  +    G    RI   +     G+ +  L    R            
Sbjct: 457 LREAPEALPELVYNRLCS-AGWEAERIA-RTLHFPRGLPRPRLRHPVRLWTGEERTLHGH 514

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
              +     SP+ Q++  A  D      + + D    +    +    + + A   S +G+
Sbjct: 515 SDRVNACVISPDGQRIISACRDR----TLKVWDLATGQLLSTLEGHSASVTACAISPDGR 570

Query: 271 RALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           R + S   D  + ++  DL +      L        + + +PD  +IV  S       L 
Sbjct: 571 RIV-SASDDRTLKVW--DLATGQLLSTLEGHSASIYACAINPDGRRIVSAS---WDRTLN 624

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V            +   AS      SP G  I           + V      Q    +E 
Sbjct: 625 VWDLATGQLLSTLEGHSASVTACAISPDGQRIVSASDDRT---LKVWDLATGQLLSTLEG 681

Query: 390 SNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +    A   SP+G+ ++ + +   D   K++ +
Sbjct: 682 HSAWVTACAISPAGQRIVSTSR---DRTLKVWDL 712


>gi|302854567|ref|XP_002958790.1| hypothetical protein VOLCADRAFT_100103 [Volvox carteri f.
            nagariensis]
 gi|300255850|gb|EFJ40133.1| hypothetical protein VOLCADRAFT_100103 [Volvox carteri f.
            nagariensis]
          Length = 1672

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 79/225 (35%), Gaps = 11/225 (4%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++ SG     + + +        +       ++   +SP+   +A  + D      + L
Sbjct: 1443 RTLASGSRDMGVRLWNAKSGGCTNVLKGHLDTVYSVTWSPDGTALASGSGDK----TIRL 1498

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
              T   +    +      + A  +S +GK    S   D ++ I+     +  T ++    
Sbjct: 1499 WSTTSGQCTATLEGHLDTVWAVAWSPDGKALA-SGSIDASVRIWD-PAAARCTIKMDGHS 1556

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S S+SPD   +   S       + +  +   +   + +      F   +SP G  +
Sbjct: 1557 SEVRSVSWSPDGRTLASGSI---DMTIRLWDTATGNCTGVLRGHCGCVFSVTFSPDGTTL 1613

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
            A +    +   +  +   G    +L     ++ + +WSP GR+L 
Sbjct: 1614 A-SGGRDKNVRLWDVAAGGELVTVLQGHPDDVNSVSWSPDGRTLA 1657



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 74/199 (37%), Gaps = 16/199 (8%)

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               I+    +SP+ + +A  + D      + L D         +      + A  +S +G
Sbjct: 1387 HSDIVNSVSWSPDGRTLASGSDDR----TIRLWDASTGECTATLEGPLDRVFAVSWSPDG 1442

Query: 270  KRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +    S  +D  + ++  + +S      L   L    S ++SPD + +   S   G + +
Sbjct: 1443 RTLA-SGSRDMGVRLW--NAKSGGCTNVLKGHLDTVYSVTWSPDGTALASGS---GDKTI 1496

Query: 329  YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             +  +         +    + +   WSP G  +A          + +     ++  + ++
Sbjct: 1497 RLWSTTSGQCTATLEGHLDTVWAVAWSPDGKALASGSIDAS---VRIWDPAAARCTIKMD 1553

Query: 389  DSNLQ--APTWSPSGRSLI 405
              + +  + +WSP GR+L 
Sbjct: 1554 GHSSEVRSVSWSPDGRTLA 1572



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 77/206 (37%), Gaps = 14/206 (6%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +R +     +++    +SP+ + +A  + D      V L D         +    S + A
Sbjct: 1077 LRGVLEGHSRVVMAVAWSPDGRTLASGSGD----ATVRLWDAASGECIATLQGHASDVQA 1132

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESD 321
              +S +G     S   D ++ ++ +         + +     +   S+S D   +   S+
Sbjct: 1133 VAWSPSGGALA-SGSNDGSVRLWDMATGDCVATLMLSQPGEEVRCVSWSHDGRTLASGSN 1191

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 ++ V  +   D   + +    +     WSP+G L+A     GE   + +      
Sbjct: 1192 LG---EVRVWDAASGDCVLVLEGHVDAVLSVAWSPRGGLLA---SGGEDETVRLWHPASG 1245

Query: 382  Q--ERLLVEDSNLQAPTWSPSGRSLI 405
            Q    +L    +++  +WSP GR+L 
Sbjct: 1246 QCTATMLGHAGSVRKVSWSPDGRTLA 1271



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 67/191 (35%), Gaps = 11/191 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ +                  ++   +SP+ + +A  + D      V + D  
Sbjct: 1489 SGSGDKTIRLWSTTSGQCTATLEGHLDTVWAVAWSPDGKALASGSIDA----SVRIWDPA 1544

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
              R   ++    S + +  +S +G+    S   D  + ++  D  +      L       
Sbjct: 1545 AARCTIKMDGHSSEVRSVSWSPDGRTLA-SGSIDMTIRLW--DTATGNCTGVLRGHCGCV 1601

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++SPD + +     R+   +L+ + + G +   + Q          WSP G  +A +
Sbjct: 1602 FSVTFSPDGTTLA-SGGRDKNVRLWDV-AAGGELVTVLQGHPDDVNSVSWSPDGRTLA-S 1658

Query: 365  KFSGEKFAIGV 375
                E   + V
Sbjct: 1659 GSDDETIRVYV 1669



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 80/270 (29%), Gaps = 28/270 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ +                  + +  +SP+ + +A       D   + L +  
Sbjct: 1230 SGGEDETVRLWHPASGQCTATMLGHAGSVRKVSWSPDGRTLA----SGSDDATIRLWEAA 1285

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                   +      +    +S +G+  + S   D+ + I+  D  +     L      + 
Sbjct: 1286 SGECVSTMEGHSWPVTCVSWSPDGRDLV-SGSTDQTIRIW--DAGTGVC--LGGLEEFSY 1340

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGS---------DQKRISQDKEASYFDPVWSP 356
            S ++SPD   +   S       + +     +               Q          WSP
Sbjct: 1341 SVAWSPDGRTLA--SGGSIDPCVRLWDVAATIGAAEEGAGSGGGGQQGHSDIVNSVSWSP 1398

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDT 414
             G  +A      +   I +      +    +E    +  A +WSP GR+L    +   D 
Sbjct: 1399 DGRTLA---SGSDDRTIRLWDASTGECTATLEGPLDRVFAVSWSPDGRTLASGSR---DM 1452

Query: 415  GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            G +L++    G    L           W  
Sbjct: 1453 GVRLWNAKSGGCTNVLKGHLDTVYSVTWSP 1482



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/345 (13%), Positives = 87/345 (25%), Gaps = 54/345 (15%)

Query: 88   KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
               +    S  +   W+  G      G +     D      RLWD+     +        
Sbjct: 1120 IATLQGHASDVQAVAWSPSG------GALASGSNDG---SVRLWDMATGDCVATLMLSQP 1170

Query: 148  PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
                R +                   + R L       SG     + V D    +   + 
Sbjct: 1171 GEEVRCV---------------SWSHDGRTL------ASGSNLGEVRVWDAASGDCVLVL 1209

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                  +    +SP    +A       +   V L      +    +      +    +S 
Sbjct: 1210 EGHVDAVLSVAWSPRGGLLA----SGGEDETVRLWHPASGQCTATMLGHAGSVRKVSWSP 1265

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            +G+    S   D  + ++           +    +     S+SPD   +V  S     + 
Sbjct: 1266 DGRTLA-SGSDDATIRLWEA-ASGECVSTMEGHSWPVTCVSWSPDGRDLVSGST---DQT 1320

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-------- 379
            + +  +            E   +   WSP G  +A          +  +           
Sbjct: 1321 IRIWDAGTGVC---LGGLEEFSYSVAWSPDGRTLASGGSIDPCVRLWDVAATIGAAEEGA 1377

Query: 380  -GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                         + + +WSP GR+L        D   +L+    
Sbjct: 1378 GSGGGGQQGHSDIVNSVSWSPDGRTLASGSD---DRTIRLWDAST 1419



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 62/196 (31%), Gaps = 13/196 (6%)

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYS 310
             +     +++A  +S +G+    S   D  + ++  D  S            ++ A ++S
Sbjct: 1080 VLEGHSRVVMAVAWSPDGRTLA-SGSGDATVRLW--DAASGECIATLQGHASDVQAVAWS 1136

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            P    +   S+ +G  +L+ M +       +            WS  G  +A     G  
Sbjct: 1137 PSGGALASGSN-DGSVRLWDMATGDCVATLMLSQPGEEVRCVSWSHDGRTLASGSNLG-- 1193

Query: 371  FAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              + V         L++E     + +  WSP G  L        D   +L+         
Sbjct: 1194 -EVRVWDAASGDCVLVLEGHVDAVLSVAWSPRGGLLA---SGGEDETVRLWHPASGQCTA 1249

Query: 429  TLINTPAYASDPQWVG 444
            T++          W  
Sbjct: 1250 TMLGHAGSVRKVSWSP 1265



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 45/136 (33%), Gaps = 11/136 (8%)

Query: 157  TISDDIYQSITGEKGDFNSRILFVS-----ESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
             I D      T +    +S +  VS      ++ SG I  ++ + D    N   +     
Sbjct: 1539 RIWDPAAARCTIKMDGHSSEVRSVSWSPDGRTLASGSIDMTIRLWDTATGNCTGVLRGHC 1598

Query: 212  QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGK 270
              +F   FSP+   +A           V L D          +      + +  +S +G+
Sbjct: 1599 GCVFSVTFSPDGTTLA----SGGRDKNVRLWDVAAGGELVTVLQGHPDDVNSVSWSPDGR 1654

Query: 271  RALISVQKDEAMDIYS 286
                S   DE + +Y 
Sbjct: 1655 TLA-SGSDDETIRVYV 1669


>gi|320109276|ref|YP_004184866.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319927797|gb|ADV84872.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
          Length = 702

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 90/282 (31%), Gaps = 41/282 (14%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
             +K  + ++   G   + +   +         SP   +VAY         +V++   + 
Sbjct: 119 DGVKQQVWMVSAGGGEPKLIAAGKSG-----AISPKGDRVAYVAKG-----QVWVASLQG 168

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +  P ++   R  +   R++ +    +   ++ +   I            +      +  
Sbjct: 169 EPKPTQLFEGRGTMRNLRWAPDASAVVFVTERGDHAFIGEYRFGEKTLTWVDPGTEQDGE 228

Query: 307 ASYSPDSSQIVFESD------------REGKE-QLYVMQSNGSDQKRISQDKEA------ 347
             +SPD ++I F  +            R G   ++ V  +   + K + +  E       
Sbjct: 229 PVWSPDGTKIAFVRNPTGFDDASERAVRSGPPWEIRVADAKTGEGKLLWRADEGRGSLYR 288

Query: 348 ---SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--GR 402
               +    WS  G  + F         +  +   G   +LL      +    +P   G+
Sbjct: 289 EIVGHDVLTWSADG-YLVFPWEKDGWTHLYSIPSGGGAAKLLT-PGAFEVEQVAPMLGGK 346

Query: 403 SLIFSRKKDGDTGSK-----LYSIDLNGRNETLINTPAYASD 439
           +++FS  + G          ++S+  +G +     T     +
Sbjct: 347 AVVFSSNQYGADAKDADRRHVWSVPASGASLPTALTKGEGIE 388



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 64/180 (35%), Gaps = 34/180 (18%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS--DQKRIS---Q 343
            Q  + E++    F N   + +P   ++ + ++ EG+  L+V +  G     + ++   +
Sbjct: 20  AQGFSLEQVMKAPFTNDLVA-APVKGRVAWVTNAEGRRNLWVAEPAGDAWKARMVTAYAE 78

Query: 344 DKEASYFDPVWSPQGDLIAFTK-----------------FSGEKFAIGVMKKDGSQERLL 386
           D      D   +P G+ + +T+                   G K  + ++   G + +L+
Sbjct: 79  DDGQELGDVSVTPDGEWVVYTRGGSVQGEAHPVPNPAALVDGVKQQVWMVSAGGGEPKLI 138

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE--TLINTPAYASDPQWVG 444
               +      SP G  + +  K       +++   L G  +   L        + +W  
Sbjct: 139 AAGKSG---AISPKGDRVAYVAK------GQVWVASLQGEPKPTQLFEGRGTMRNLRWAP 189


>gi|145551642|ref|XP_001461498.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124429332|emb|CAK94125.1| unnamed protein product [Paramecium tetraurelia]
          Length = 609

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 101/308 (32%), Gaps = 45/308 (14%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             RLWD    ++I   +            H  SD ++       G              S
Sbjct: 218 SIRLWDTNTGRKIAKFQ-----------GH--SDCVFSVCFSPDGTLL----------AS 254

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    S+ V +      +         +    FSP+   +A  + D      + L   + 
Sbjct: 255 GSADKSIRVWNVKTGQQKTQLDGHRDFVRSVCFSPDGIILASGSDDR----SIRLWHLKK 310

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINI 305
            +   +     + + +  FS NG +   S   D ++ I+  D+++   ++ L     I  
Sbjct: 311 GKQISQFDGHTNYVFSVCFSPNGTKIA-SGSVDNSIRIW--DVKTGQLKKKLDGHSSIVR 367

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S  +S D   +   SD    + + +  +     K       +      +SP G  IA + 
Sbjct: 368 SVCFSSDGITVASGSD---DKSIRLWDATTGQLKAKLFGHISGIRSVCFSPDGRQIASSS 424

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                    +      Q+  ++E     + A  +SP G  L       G   + +Y  D+
Sbjct: 425 VDQST---RLWDIKTLQQTAILEGHSKTVFAVCFSPDGSYLA-----SGSADNFIYLRDV 476

Query: 424 -NGRNETL 430
            +G+ + +
Sbjct: 477 KSGKFKVI 484



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 84/241 (34%), Gaps = 17/241 (7%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S+VS     S+ + D +              +F   FSP+   +A  + D      + + 
Sbjct: 209 SLVSSSEDKSIRLWDTNTGRKIAKFQGHSDCVFSVCFSPDGTLLASGSADK----SIRVW 264

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +  +   ++   R  + +  FS +G   L S   D ++ ++ +  +     +      
Sbjct: 265 NVKTGQQKTQLDGHRDFVRSVCFSPDG-IILASGSDDRSIRLWHL-KKGKQISQFDGHTN 322

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S  +SP+ ++I   S       + +        K+      +      +S  G  +A
Sbjct: 323 YVFSVCFSPNGTKIASGSV---DNSIRIWDVKTGQLKKKLDGHSSIVRSVCFSSDGITVA 379

Query: 363 FTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                     I +      Q   +L    S +++  +SP GR +  S     D  ++L+ 
Sbjct: 380 SGSDDKS---IRLWDATTGQLKAKLFGHISGIRSVCFSPDGRQIASSSV---DQSTRLWD 433

Query: 421 I 421
           I
Sbjct: 434 I 434



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/285 (15%), Positives = 90/285 (31%), Gaps = 37/285 (12%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD------- 172
                    R+W+VK  +Q    +        R +  +    I  S + ++         
Sbjct: 253 ASGSADKSIRVWNVKTGQQ--KTQLDGHRDFVRSVCFSPDGIILASGSDDRSIRLWHLKK 310

Query: 173 ------FNSRILFVS--------ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
                 F+    +V           + SG + NS+ + D     ++        I+    
Sbjct: 311 GKQISQFDGHTNYVFSVCFSPNGTKIASGSVDNSIRIWDVKTGQLKKKLDGHSSIVRSVC 370

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +   VA  + D      + L D    +   ++    S I +  FS +G++   S   
Sbjct: 371 FSSDGITVASGSDDK----SIRLWDATTGQLKAKLFGHISGIRSVCFSPDGRQIA-SSSV 425

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D++  ++  D+++     +       + A  +SPD S +   S       +Y+       
Sbjct: 426 DQSTRLW--DIKTLQQTAILEGHSKTVFAVCFSPDGSYLASGS---ADNFIYLRDVKSGK 480

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            K I           + SP G ++          +I        Q
Sbjct: 481 FKVIKDAHINYRRSIILSPDGKIL---GSDNGDKSIHFYDVKTGQ 522



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 64/190 (33%), Gaps = 14/190 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +  ++ D      + L DT   R   +       + +  FS +G     S  
Sbjct: 202 SFSPDGSSLVSSSEDK----SIRLWDTNTGRKIAKFQGHSDCVFSVCFSPDGTLLA-SGS 256

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+++ +++V        +L        S  +SPD   +   SD      + +       
Sbjct: 257 ADKSIRVWNV-KTGQQKTQLDGHRDFVRSVCFSPDGIILASGSD---DRSIRLWHLKKGK 312

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAP 395
           Q           F   +SP G  IA          I +      Q +  ++  +  +++ 
Sbjct: 313 QISQFDGHTNYVFSVCFSPNGTKIASGSVDNS---IRIWDVKTGQLKKKLDGHSSIVRSV 369

Query: 396 TWSPSGRSLI 405
            +S  G ++ 
Sbjct: 370 CFSSDGITVA 379



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 73/222 (32%), Gaps = 34/222 (15%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K     +    R+WDVK  +  + KK     +  R +  + SD I              
Sbjct: 334 TKIASGSVDNSIRIWDVKTGQ--LKKKLDGHSSIVRSVCFS-SDGI-------------- 376

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 +V SG    S+ + D     ++         +    FSP+ +++A ++ D    
Sbjct: 377 ------TVASGSDDKSIRLWDATTGQLKAKLFGHISGIRSVCFSPDGRQIASSSVDQ--- 427

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
               L D +  +    +      + A  FS +G              IY  D++S   + 
Sbjct: 428 -STRLWDIKTLQQTAILEGHSKTVFAVCFSPDGSYLA---SGSADNFIYLRDVKSGKFKV 483

Query: 297 LTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           + +  +    S   SPD   +   SD  G + ++        
Sbjct: 484 IKDAHINYRRSIILSPDGKIL--GSD-NGDKSIHFYDVKTGQ 522



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 58/176 (32%), Gaps = 9/176 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G   + S  +D+++ ++  +       +         S  +SPD + +   S   
Sbjct: 202 SFSPDGSSLV-SSSEDKSIRLWDTN-TGRKIAKFQGHSDCVFSVCFSPDGTLLASGS--- 256

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + V       QK              +SP G ++A +        +  +KK     
Sbjct: 257 ADKSIRVWNVKTGQQKTQLDGHRDFVRSVCFSPDGIILA-SGSDDRSIRLWHLKKGKQIS 315

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +     + + +  +SP+G  +        D   +++ +      + L    +    
Sbjct: 316 QFDGHTNYVFSVCFSPNGTKIA---SGSVDNSIRIWDVKTGQLKKKLDGHSSIVRS 368


>gi|119488032|ref|ZP_01621476.1| Peptidase C14, caspase catalytic subunit p20 [Lyngbya sp. PCC 8106]
 gi|119455321|gb|EAW36460.1| Peptidase C14, caspase catalytic subunit p20 [Lyngbya sp. PCC 8106]
          Length = 592

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 96/232 (41%), Gaps = 18/232 (7%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + + DG+ +R         ++   FSP+ Q +A A+ D      V L +         I 
Sbjct: 1   MWNLDGS-LRTTLNGHQLEVYAVTFSPDGQTIASASRDK----TVKLWNID-GSLRTTIN 54

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              + +    FS +G+    S  +D+ + ++ +D        L          ++SPD  
Sbjct: 55  AHDAEVYGVAFSPDGQTIA-SASRDKTVKLWKID--GTLISVLKGHQGPVRGVAFSPDGQ 111

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +   S+ +   +L+ +++  +   + + +   A     V+SP G  IA   F G    +
Sbjct: 112 TLASASE-DNSLKLWTIKTLKTPVLQTTLNGHRAGVCGVVFSPDGQTIASASFDGT---V 167

Query: 374 GVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +  +DGS Q  L+  +  + A  +SP G++L       GD   KL++ D +
Sbjct: 168 KLWNRDGSLQNTLIGHNDQVYAVAFSPDGQTLA---STSGDQTIKLWNRDGS 216



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 110/300 (36%), Gaps = 42/300 (14%)

Query: 135 DRKQIIGKKFFSSPASWRK--------IAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           D + I    F  +   W +        I H   D +Y       G          +++ S
Sbjct: 154 DGQTIASASFDGTVKLWNRDGSLQNTLIGHN--DQVYAVAFSPDG----------QTLAS 201

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                ++ + +RDG+ ++      D  +++  FSP+ Q +  A+ D    +R++++    
Sbjct: 202 TSGDQTIKLWNRDGS-LQNTLIGHDNEVWKVAFSPDGQTLVSASGD--KTVRLWMLH--- 255

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +    R+      +    +S + +    +  +D+ + ++  +   +    L         
Sbjct: 256 NSLLTRLRVSADEVWGVAWSGDSRTIA-TASRDKTVKLW--NPDGSLRSTLKGHTAEVSG 312

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPD   +   S       + +  ++G+ +  ++ D +   +   +SP   ++  +  
Sbjct: 313 VAFSPDGQTLASAS---WDRTIKLWNADGTLRTTLT-DHQDLVYAVAFSPDSQMMV-SAS 367

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSID 422
           S +   +  +        L   +       W    SP G+++  +  + G    KL+ ++
Sbjct: 368 SDKTVKLWQLSPKNPPIVLKTLNGFDTE-VWDVVLSPDGQTIA-ASSRGG--IVKLWDVN 423



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 89/239 (37%), Gaps = 20/239 (8%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S ++ +     ++ + + DG+ +R         +    FSP+ Q +A A++D      + 
Sbjct: 278 SRTIATASRDKTVKLWNPDGS-LRSTLKGHTAEVSGVAFSPDGQTLASASWDR----TIK 332

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L +         + + + ++ A  FS + +  + S   D+ + ++ +  + N    L   
Sbjct: 333 LWNAD-GTLRTTLTDHQDLVYAVAFSPDSQMMV-SASSDKTVKLWQLSPK-NPPIVLKTL 389

Query: 301 LFINISASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
              +    +    SPD   I   S R G  +L+ +           +  +       +SP
Sbjct: 390 NGFDTE-VWDVVLSPDGQTIA-ASSRGGIVKLWDVN---GVLLATLEAHQGGVKTVAFSP 444

Query: 357 QGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            G ++A          + +   +       L   D+ +    +SP G++L  S  +DG 
Sbjct: 445 DGQMLATGSEDQTVKLWKLQANQPPRLVHTLNSHDAEVLGIAFSPDGQTLA-SASQDGT 502


>gi|242771589|ref|XP_002477873.1| G-protein beta WD-40 repeats containing protein, putative
            [Talaromyces stipitatus ATCC 10500]
 gi|218721492|gb|EED20910.1| G-protein beta WD-40 repeats containing protein, putative
            [Talaromyces stipitatus ATCC 10500]
          Length = 1472

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 84/239 (35%), Gaps = 19/239 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D    +++         +    FS + + V  ++ D      V L D  
Sbjct: 1014 SGSRDKTVKLWDPATGSLQQTLKGHSSWINAVAFSSDSKLVVSSSSDK----TVKLWDPA 1069

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                 + + N  +  +A  FS + K    S   D+ + ++  D  + + ++ L       
Sbjct: 1070 TGHLQRTLDNHNNWGIAVAFSPDSKLLA-SGSNDQTVKLW--DPATGSLQQTLDGHTGWV 1126

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            ++ ++SP    +   S  +G  +L+         ++  +          +SP G L+A  
Sbjct: 1127 VTVAFSPCGKLVASGSH-DGTVRLW--NPATGSLQQTLKGHTGWVNAVTFSPDGKLVASG 1183

Query: 365  KFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    + +           ++     + A  +SP+ + +  S     D   KL+ +
Sbjct: 1184 SHD---LTVKLWDSATGSLLQTLDGHTGWVAAVVFSPNSKIIASSSH---DWTIKLWDL 1236



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 76/223 (34%), Gaps = 16/223 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D    +++         +    FSP  + VA  ++D      V L +  
Sbjct: 1098 SGSNDQTVKLWDPATGSLQQTLDGHTGWVVTVAFSPCGKLVASGSHDG----TVRLWNPA 1153

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                 + +      + A  FS +GK    S   D  + ++  D  + +  + L       
Sbjct: 1154 TGSLQQTLKGHTGWVNAVTFSPDGKLVA-SGSHDLTVKLW--DSATGSLLQTLDGHTGWV 1210

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             +  +SP+S  I   S       + +     S  ++ S    +S      SP G L+A  
Sbjct: 1211 AAVVFSPNSKIIASSSH---DWTIKLWDLATSSLQQTSSSHSSSVVAMALSPDGQLLASG 1267

Query: 365  KFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
                    I +        +  +      + A T+SP G+ + 
Sbjct: 1268 SHDKT---IKLWDLATGSLQQTLKGHTGWVNAVTFSPDGKLVA 1307



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 76/221 (34%), Gaps = 14/221 (6%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG    ++ + +    +++         +    FSP+ + VA  ++D    L V L D
Sbjct: 1138 VASGSHDGTVRLWNPATGSLQQTLKGHTGWVNAVTFSPDGKLVASGSHD----LTVKLWD 1193

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            +      + +      + A  FS N K    S   D  + ++ +   S+  +  ++    
Sbjct: 1194 SATGSLLQTLDGHTGWVAAVVFSPNSKIIA-SSSHDWTIKLWDL-ATSSLQQTSSSHSSS 1251

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             ++ + SPD   +   S     + + +        ++  +          +SP G L+A 
Sbjct: 1252 VVAMALSPDGQLLASGSH---DKTIKLWDLATGSLQQTLKGHTGWVNAVTFSPDGKLVAS 1308

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGR 402
                     + +           ++          +SP+GR
Sbjct: 1309 GSHD---LTVKLWDSATGSLLQTLDGHTGWVAAVLFSPNGR 1346



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 91/279 (32%), Gaps = 21/279 (7%)

Query: 164  QSITGEKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            Q        + + + F S+S  VVS     ++ + D    +++    + +       FSP
Sbjct: 1032 QQTLKGHSSWINAVAFSSDSKLVVSSSSDKTVKLWDPATGHLQRTLDNHNNWGIAVAFSP 1091

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + + +A  + D      V L D       + +      ++   FS  GK    S   D  
Sbjct: 1092 DSKLLASGSNDQ----TVKLWDPATGSLQQTLDGHTGWVVTVAFSPCGKLVA-SGSHDGT 1146

Query: 282  MDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + ++  +  + + ++ L        + ++SPD   +   S       + +  S      +
Sbjct: 1147 VRLW--NPATGSLQQTLKGHTGWVNAVTFSPDGKLVASGSH---DLTVKLWDSATGSLLQ 1201

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--S 398
                        V+SP   +IA +      + I +     S  +      +        S
Sbjct: 1202 TLDGHTGWVAAVVFSPNSKIIASSSHD---WTIKLWDLATSSLQQTSSSHSSSVVAMALS 1258

Query: 399  PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            P G+ L        D   KL+ +      +TL     + 
Sbjct: 1259 PDGQLLASGSH---DKTIKLWDLATGSLQQTLKGHTGWV 1294



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 74/242 (30%), Gaps = 50/242 (20%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYD-------------------------------- 232
                     +    FSP+   VA  ++D                                
Sbjct: 949  QTLEGHTGPVVAVAFSPDGNLVASGSHDGTIKLWNPVTSSLLRTLIGHTGWINAVVFSLN 1008

Query: 233  ------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                        V L D       + +    S I A  FSS+  + ++S   D+ + ++ 
Sbjct: 1009 SKLIASGSRDKTVKLWDPATGSLQQTLKGHSSWINAVAFSSD-SKLVVSSSSDKTVKLW- 1066

Query: 287  VDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             D  +   +R L N     I+ ++SPDS  +   S+    + + +        ++     
Sbjct: 1067 -DPATGHLQRTLDNHNNWGIAVAFSPDSKLLASGSN---DQTVKLWDPATGSLQQTLDGH 1122

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRS 403
                    +SP G L+A     G    + +        +  +      + A T+SP G+ 
Sbjct: 1123 TGWVVTVAFSPCGKLVASGSHDGT---VRLWNPATGSLQQTLKGHTGWVNAVTFSPDGKL 1179

Query: 404  LI 405
            + 
Sbjct: 1180 VA 1181



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 76/224 (33%), Gaps = 20/224 (8%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG    ++ + D    ++          +    FSPN + +A +++D      + L D
Sbjct: 1180 VASGSHDLTVKLWDSATGSLLQTLDGHTGWVAAVVFSPNSKIIASSSHD----WTIKLWD 1235

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
                   +   +  S ++A   S +G+    S   D+ + ++  DL + + ++ L     
Sbjct: 1236 LATSSLQQTSSSHSSSVVAMALSPDGQLLA-SGSHDKTIKLW--DLATGSLQQTLKGHTG 1292

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL-- 360
               + ++SPD   +   S       + +  S      +            ++SP G L  
Sbjct: 1293 WVNAVTFSPDGKLVASGSH---DLTVKLWDSATGSLLQTLDGHTGWVAAVLFSPNGRLTF 1349

Query: 361  -----IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                 +  +    E   +          +  ++  +     +SP
Sbjct: 1350 SPGGKLMASGSPDETVELW--DATTGSLQQTIKTGSTDTVEFSP 1391



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 73/230 (31%), Gaps = 15/230 (6%)

Query: 219  FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FSP    +   Y       I ++  +++      + +      ++A  FS +G     S 
Sbjct: 915  FSPMTSIIRNFYINEIPSWIQKLPQVESAWSAVLQTLEGHTGPVVAVAFSPDGNLVA-SG 973

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              D  + +++  + S+    L        +  +S +S  I   S R+   +L+       
Sbjct: 974  SHDGTIKLWN-PVTSSLLRTLIGHTGWINAVVFSLNSKLIASGS-RDKTVKLW--DPATG 1029

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--A 394
              ++  +   +      +S    L+  +        + +        +  +++ N    A
Sbjct: 1030 SLQQTLKGHSSWINAVAFSSDSKLVVSSSSDKT---VKLWDPATGHLQRTLDNHNNWGIA 1086

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              +SP  + L        D   KL+        +TL     +     +  
Sbjct: 1087 VAFSPDSKLLA---SGSNDQTVKLWDPATGSLQQTLDGHTGWVVTVAFSP 1133


>gi|189463380|ref|ZP_03012165.1| hypothetical protein BACCOP_04097 [Bacteroides coprocola DSM 17136]
 gi|189429809|gb|EDU98793.1| hypothetical protein BACCOP_04097 [Bacteroides coprocola DSM 17136]
          Length = 708

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 54/317 (17%), Positives = 104/317 (32%), Gaps = 70/317 (22%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG N   LT + D    EP +  +  K+A+ T      ++++ 
Sbjct: 76  YSVKENKSHTVIYVMNADGTNNLLLTHTADS-EVEPTWIKDGSKIAFLTAASGS-MQIWE 133

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---KDEAMDIY-SVDLQSNATER- 296
           M+       K++ ++   I   +FS +  + L   Q        DIY  +D  S      
Sbjct: 134 MNPD-GSERKQLSSYEGGIEGFKFSPDESKVLFISQVKYGQRTSDIYPDLDKASGKVIND 192

Query: 297 -----------------LTNTLFINISA-----------------------SYSPDSSQI 316
                            + +     + A                       ++S DS QI
Sbjct: 193 LMYKHWDEWVENIPHPFVASFDGNQVGAATDILKDEPYESPMKPFGGIEQLAWSNDSKQI 252

Query: 317 VFE--------SDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDPVWSPQGDLIAF 363
            +                 +Y+  +   + + +     +        +P +SP G  IA+
Sbjct: 253 AYTCRKKTGLEYSVSTDSDIYLYNTETGETRNLCKEDATDKNLGYDTNPKFSPDGKSIAW 312

Query: 364 TKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
                  +      + VM     ++  + E   S +    W+P G++L F         S
Sbjct: 313 QSMERNGYESDRNRLCVMNLKSGEKTYVTEAFQSGVDDYCWAPDGKTLYFVGV--WHATS 370

Query: 417 KLYSIDLNGRNETLINT 433
            ++S +L G  + L + 
Sbjct: 371 MVHSTNLKGEVKQLTDG 387



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 94/296 (31%), Gaps = 70/296 (23%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+ +++AY        +++    +Y+M+         + +     + P +  +G + 
Sbjct: 61  SVSPDGKQIAYTVSYYSVKENKSHTVIYVMNADGTNNL-LLTHTADSEVEPTWIKDGSKI 119

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
                   +M I+ ++   +  ++L++         +SPD S+++F S            
Sbjct: 120 AFLTAASGSMQIWEMNPDGSERKQLSSYEGGIEGFKFSPDESKVLFISQVKYGQRTSDIY 179

Query: 322 -----REGK-----------------EQLYVMQSNGSDQKRISQ-----------DKEAS 348
                  GK                    +V   +G+     +                 
Sbjct: 180 PDLDKASGKVINDLMYKHWDEWVENIPHPFVASFDGNQVGAATDILKDEPYESPMKPFGG 239

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFA--------IGVMKKDGSQERLLVED-------SNLQ 393
                WS     IA+T                I +   +  + R L ++           
Sbjct: 240 IEQLAWSNDSKQIAYTCRKKTGLEYSVSTDSDIYLYNTETGETRNLCKEDATDKNLGYDT 299

Query: 394 APTWSPSGRSLIF-SRKKDG--DTGSKLYSIDLNGRNETLINTP--AYASDPQWVG 444
            P +SP G+S+ + S +++G     ++L  ++L    +T +     +   D  W  
Sbjct: 300 NPKFSPDGKSIAWQSMERNGYESDRNRLCVMNLKSGEKTYVTEAFQSGVDDYCWAP 355



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 56/383 (14%), Positives = 125/383 (32%), Gaps = 83/383 (21%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDVKDRK---QIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            G        +     V +  + VK+ K    I       +      + HT   ++  + 
Sbjct: 57  IGSSSVSPDGKQIAYTVSY--YSVKENKSHTVIYVMNADGTNNLL--LTHTADSEVEPTW 112

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
             +     S+I F++ +  S      +  M+ DG+  + L+     I    +FSP++ KV
Sbjct: 113 IKDG----SKIAFLTAASGS----MQIWEMNPDGSERKQLSSYEGGIEGF-KFSPDESKV 163

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRI--------------------GNFRSMILAPR-- 264
            + +          +       + K I                     +F    +     
Sbjct: 164 LFISQVKYGQRTSDIYPDLDKASGKVINDLMYKHWDEWVENIPHPFVASFDGNQVGAATD 223

Query: 265 ---------------------FSSNGKRALIS--------VQKDEAMDIYSVDLQSNATE 295
                                +S++ K+   +               DIY  + ++  T 
Sbjct: 224 ILKDEPYESPMKPFGGIEQLAWSNDSKQIAYTCRKKTGLEYSVSTDSDIYLYNTETGETR 283

Query: 296 RL-----TN-TLFINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQD 344
            L     T+  L  + +  +SPD   I ++S +R G    + +L VM     ++  +++ 
Sbjct: 284 NLCKEDATDKNLGYDTNPKFSPDGKSIAWQSMERNGYESDRNRLCVMNLKSGEKTYVTEA 343

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            ++   D  W+P G  + F         +      G + + L +           + + L
Sbjct: 344 FQSGVDDYCWAPDGKTLYFVGVWHATSMVHSTNLKG-EVKQLTDGMYDYTSVAMLNNKQL 402

Query: 405 IFSRKKDGDTGSKLYSIDLNGRN 427
           + +++       +L+++DL  +N
Sbjct: 403 L-TKRHSLSEADELFTVDLKKKN 424



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 82/252 (32%), Gaps = 66/252 (26%)

Query: 258 SMILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I +   S +GK+   +V             IY ++        LT+T    +  ++  
Sbjct: 55  GRIGSSSVSPDGKQIAYTVSYYSVKENKSHTVIYVMNADGTNNLLLTHTADSEVEPTWIK 114

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
           D S+I F +   G  Q++ M  +GS++K++S   E       +SP    + F        
Sbjct: 115 DGSKIAFLTAASGSMQIWEMNPDGSERKQLSSY-EGGIEGFKFSPDESKVLFISQVKYGQ 173

Query: 367 ------------SGEKF----------------AIGVMKKDGSQERLLVE---DSNLQAP 395
                       SG+                     V   DG+Q     +   D   ++P
Sbjct: 174 RTSDIYPDLDKASGKVINDLMYKHWDEWVENIPHPFVASFDGNQVGAATDILKDEPYESP 233

Query: 396 ----------TWSPSGRSLIFS-RKKDG-----DTGSKLYSIDL-NGRNETL------IN 432
                      WS   + + ++ RKK G      T S +Y  +   G    L        
Sbjct: 234 MKPFGGIEQLAWSNDSKQIAYTCRKKTGLEYSVSTDSDIYLYNTETGETRNLCKEDATDK 293

Query: 433 TPAYASDPQWVG 444
              Y ++P++  
Sbjct: 294 NLGYDTNPKFSP 305


>gi|73670219|ref|YP_306234.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
 gi|72397381|gb|AAZ71654.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
          Length = 728

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 104/299 (34%), Gaps = 41/299 (13%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            IS++      G    +  R+++   +         + + +   +    +T       + 
Sbjct: 203 KISNESRVVNLGRSNIYADRVVW---TGADSTGLIDIYMYNITTSEEIRITTGN----YG 255

Query: 217 PRFSPN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             +SPN    ++ +    + +   +Y+ D    +   +I    S    P     G R + 
Sbjct: 256 SGWSPNIYGDRIVWMDGRNGN-QDIYMYDLST-KKETQITTNESFQGWPAMY--GGRIVW 311

Query: 275 SVQKDEAMDIYSVDLQSNAT---------ERLTNTLFINISASYSPDSSQIVFESDREG- 324
           S  ++   DIY   L S             ++T       S        +IV++ DR G 
Sbjct: 312 SDNRNGNSDIYMFTLDSGELKPPEIEGTQTQITTNNSSQSSPDIY--GERIVWQDDRNGY 369

Query: 325 --------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                      +Y+   + S + +++ + E++   P        I +T      + + + 
Sbjct: 370 YDAYVYEPNWDIYMYDLSTSTESQVTSN-ESNQSGPAIYED--KIVWTDDRNGNYDVYMY 426

Query: 377 KKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                ++ ++   +SN   P     G  ++++  ++G     +Y  DL+   ET I T 
Sbjct: 427 NISTFTETQITTNESNQSMPAI--YGDRIVWTDDRNG--NQDIYMYDLSTSTETQITTN 481



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 75/223 (33%), Gaps = 15/223 (6%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             ++ +    + +   +Y+ D         I +      +  +     R +    ++  +
Sbjct: 92  GNRIVWYDARNGNG-DIYMYDLSTSTETPVITDKSEQGGSFIYE---DRIVYQDSRNGNL 147

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY  ++ +    ++T                 IV+   R G    Y+   +   + +IS
Sbjct: 148 DIYMYNISTKVETQITTNKADQWDPVIY--GDWIVWTDSRNGNYDTYMYDLSTKKETKIS 205

Query: 343 QDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS- 400
            +    +           ++     S     I +     S+E  +   +      WSP+ 
Sbjct: 206 NESRVVNLGRSNIYAD-RVVWTGADSTGLIDIYMYNITTSEEIRITTGNYGSG--WSPNI 262

Query: 401 -GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQ 441
            G  +++   ++G     +Y  DL+ + ET I T  ++   P 
Sbjct: 263 YGDRIVWMDGRNG--NQDIYMYDLSTKKETQITTNESFQGWPA 303



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 78/234 (33%), Gaps = 27/234 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S +     P    +  K+ +    + +   VY+ +       + I    S    P   
Sbjct: 394 VTSNESNQSGPAIYED--KIVWTDDRNGN-YDVYMYNISTFTETQ-ITTNESNQSMPAIY 449

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             G R + +  ++   DIY  DL ++   ++T         +      +IV+  +R   E
Sbjct: 450 --GDRIVWTDDRNGNQDIYMYDLSTSTETQITTNESNKRGPAIY--GDRIVWTDERNRYE 505

Query: 327 -----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 +Y+   + S +  I+ D     + PV    GD + +       F +       S
Sbjct: 506 EDYIVNIYMYNLSTSTETHIAGDGGFREYGPVI--YGDRVVYMSEGAGDF-VWTYDLSTS 562

Query: 382 QERLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +         +    WSP   G  +++     G   S +Y  D +   +  I +
Sbjct: 563 ELT------FIDFDAWSPDIYGNRIVWMS---GMLISDVYMYDFSTSRKIQITS 607



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 62/171 (36%), Gaps = 12/171 (7%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G + +    ++   DIY  D+ ++   R+T               ++IV+   R G   +
Sbjct: 50  GDKIVYEDLRNGNYDIYMYDISTSTETRITTNESAQSGPVIY--GNRIVWYDARNGNGDI 107

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y+   + S +  +  DK       ++    D I +         I +       E  +  
Sbjct: 108 YMYDLSTSTETPVITDKSEQGGSFIY---EDRIVYQDSRNGNLDIYMYNISTKVETQITT 164

Query: 389 DSNLQAPTWSP--SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           +   Q   W P   G  ++++  ++G      Y  DL+ + ET I+  +  
Sbjct: 165 NKADQ---WDPVIYGDWIVWTDSRNG--NYDTYMYDLSTKKETKISNESRV 210



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 64/170 (37%), Gaps = 19/170 (11%)

Query: 223 QQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
             ++ +      Y+++ I+ +Y+ +          G+       P     G R +  + +
Sbjct: 492 GDRIVWTDERNRYEEDYIVNIYMYNLSTSTETHIAGDGGFREYGPVIY--GDRVVY-MSE 548

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPD--SSQIVFESDREGKEQLYVMQSNGS 336
                +++ DL ++         FI+  A +SPD   ++IV+ S     + +Y+   + S
Sbjct: 549 GAGDFVWTYDLSTSELT------FIDFDA-WSPDIYGNRIVWMSGMLISD-VYMYDFSTS 600

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +I+ D       P     G+ I +     E   I +     ++   L
Sbjct: 601 RKIQITSDDTVHKGAPAI--YGNRIVWEDDRNENTDIYMFTLASAELTPL 648



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 19/133 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN--QQKVAYA 229
            +  R++++SE            V   D +         D       +SP+    ++ + 
Sbjct: 538 IYGDRVVYMSEGAGD-------FVWTYDLSTSELTFIDFD------AWSPDIYGNRIVWM 584

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +     I  VY+ D    R  +   +      AP     G R +    ++E  DIY   L
Sbjct: 585 SGML--ISDVYMYDFSTSRKIQITSDDTVHKGAPAIY--GNRIVWEDDRNENTDIYMFTL 640

Query: 290 QSNATERLTNTLF 302
            S     L  T  
Sbjct: 641 ASAELTPLERTKA 653


>gi|94969143|ref|YP_591191.1| peptidase S9, prolyl oligopeptidase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94551193|gb|ABF41117.1| peptidase S9, prolyl oligopeptidase [Candidatus Koribacter
           versatilis Ellin345]
          Length = 648

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 60/332 (18%), Positives = 117/332 (35%), Gaps = 43/332 (12%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            F  + ++ + + H  +  +  SI   K   +   +      V+ I++  L V    G +
Sbjct: 14  TFVITASAQQDLTHAAA--VVDSIPKTK-RIDQVAISPDGQQVAAIVEGQLTVSSASGGD 70

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +     Q   E  +S + +++A     D D+ +  +       A K I + +  +  
Sbjct: 71  SRSIPLRSKQQAREVAWSNDSRQLAIIGDLDSDVPQSDIY-LYNGGAAKSIASLKGYVQT 129

Query: 263 PRFSSNGKRALISVQKD----------------------EAMDIYSVDLQSNATERLTNT 300
           PRFS +G +  +   +D                          I ++D+ S A +++T  
Sbjct: 130 PRFSPDGSKLALLFIEDLPRVAGPLQPMTPLAGVIDEKVYEQRITTIDVASKAIKQVTPA 189

Query: 301 LFINISASYSPDSS-QIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVW 354
                   + PD S      +   G       +LY   +   +   I    +     P  
Sbjct: 190 DVYIYEYDWLPDGSGWAAIAAHGSGDNNWWIARLYRGDAATGELHEI-YAPKLQLAMPRV 248

Query: 355 SPQGDLIAFTK--FSGEKF---AIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFS 407
           SP G  + F +   S E      I ++   G + R L         +  W+  G  ++F 
Sbjct: 249 SPDGKTVVFIESLMSDEDVVGGDIYIVPIGGGEARNLTPGIKTSPASLRWTKDG-HILFG 307

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +  DG++G    +++ +G    L   P   SD
Sbjct: 308 QNVDGESGFG--TVNASGEIAKLWQGPDEVSD 337


>gi|149173262|ref|ZP_01851893.1| WD40-repeat containing protein [Planctomyces maris DSM 8797]
 gi|148848068|gb|EDL62400.1| WD40-repeat containing protein [Planctomyces maris DSM 8797]
          Length = 1705

 Score = 90.5 bits (223), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 48/247 (19%), Positives = 97/247 (39%), Gaps = 22/247 (8%)

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G     L     D    + +      ++    FSP+ + +   ++D+       + +T+ 
Sbjct: 1430 GGRDARLW---NDVTAQQVMAFHPHGVVASAAFSPDGKWLVTGSWDN----SAKIWNTQT 1482

Query: 247  DRAPKRIGN-FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +A K++       +   R+S +GKR L +  +D    I+  + +S A  R  +    ++
Sbjct: 1483 GQAEKKLEQKHNGYVNTVRYSPDGKRIL-TSSEDGTSKIW--NAESGAMLRSLDQSGTHV 1539

Query: 306  -SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             SA +SPD SQIV  SD    + L +  +    + +  +  E    +  +S  G  +   
Sbjct: 1540 KSAIFSPDGSQIVTASD---DKTLVMWDAETGKKIKTFKGHEWPVREVAYSHDGKRLISG 1596

Query: 365  KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                      +   D +++ +L    + + +  +SP      F+   DG   +KL+  D 
Sbjct: 1597 SEDNTAI---IWDIDTAKKTVLSGHTAPVASVVFSPDDSR-AFTASDDGT--AKLWDTDT 1650

Query: 424  NGRNETL 430
                 TL
Sbjct: 1651 GKEILTL 1657



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 101/253 (39%), Gaps = 24/253 (9%)

Query: 185  VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V+G   NS  + + + G   + L    +  +   R+SP+ +++  ++ D        + +
Sbjct: 1467 VTGSWDNSAKIWNTQTGQAEKKLEQKHNGYVNTVRYSPDGKRILTSSEDGTSK----IWN 1522

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TL 301
                   + +    + + +  FS +G + + +   D+ + ++  D ++    + T     
Sbjct: 1523 AESGAMLRSLDQSGTHVKSAIFSPDGSQIV-TASDDKTLVMW--DAETGKKIK-TFKGHE 1578

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +     +YS D  +++  S  E    + +   + + +  +S    A     V+SP     
Sbjct: 1579 WPVREVAYSHDGKRLI--SGSEDNTAI-IWDIDTAKKTVLS-GHTAPVASVVFSPDDSR- 1633

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKL 418
            AFT        +     D  +E +L   S+ Q  T   +SP+GR +  +  +DG     L
Sbjct: 1634 AFTASDDGTAKLW--DTDTGKE-ILTLSSHAQGVTSVDFSPNGRFVA-TGSQDGQAILWL 1689

Query: 419  YSIDLNGRNETLI 431
             ++D   +   ++
Sbjct: 1690 -TVDWKNKAPQVV 1701



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 75/225 (33%), Gaps = 22/225 (9%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
              +R  +L+   FSP    +      D  +         +   P        ++ +  FS
Sbjct: 1407 FRTRGGMLWTAIFSPYHNSILTVGGRDARLWNDVTAQQVMAFHP------HGVVASAAFS 1460

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNA-TERLTN-TLFINISASYSPDSSQIVFESDREG 324
             +GK  + +   D +  I+  + Q+    ++L         +  YSPD  +I+  S  +G
Sbjct: 1461 PDGKWLV-TGSWDNSAKIW--NTQTGQAEKKLEQKHNGYVNTVRYSPDGKRIL-TSSEDG 1516

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              +++   +      R            ++SP G  I           + +   +  ++ 
Sbjct: 1517 TSKIW--NAESGAMLRSLDQSGTHVKSAIFSPDGSQIVTASDDKT---LVMWDAETGKKI 1571

Query: 385  LLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               +      +   +S  G+ LI       D  + ++ ID   + 
Sbjct: 1572 KTFKGHEWPVREVAYSHDGKRLI---SGSEDNTAIIWDIDTAKKT 1613



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 99/292 (33%), Gaps = 44/292 (15%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G       + DR    +      +   +     SP+ + +A  + D    ++++ +++ 
Sbjct: 790  TGGKDGIARIWDRTTGRVLAAFDHQKYPVLAVAISPDGKTLATGSEDPTGFIKLWNLESN 849

Query: 246  IDRAPKRIGNFRSM---------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATE 295
                 K     +           +L+  FS +GKR L +   D+   ++  D+++     
Sbjct: 850  APIPTKFKDTSKKTPFDQGHTEGVLSISFSKDGKRLL-TSSYDKTARLW--DVKTGDQLN 906

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            R     +    A++S D  +IV  + ++G   ++   +   ++       +   +   +S
Sbjct: 907  RYWGHNWWVWDANFSTDEKRIV-TASQDGTAVIW--NTETGEKGAPFTGHQGPVYSAHFS 963

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPT---------------W 397
               D       SG    I + + +         LV     + P                +
Sbjct: 964  LDADS-THVVTSGYDRRILLWRPEDIVPYDFSKLVSGKENEPPAYVAFEGHQESVQSVEF 1022

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS------DPQWV 443
            +  G+ LI +     D   KL+ I+     +T     ++        D +W+
Sbjct: 1023 TNDGKMLISASH---DNTVKLWDIETTKALKTFRGHDSWVQSAMILNDGKWI 1071



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 87/258 (33%), Gaps = 23/258 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDT 244
            S    N++ + D +           D  +       + + +  A++D +  +  +     
Sbjct: 1031 SASHDNTVKLWDIETTKALKTFRGHDSWVQSAMILNDGKWILSASHDAQLKLWNIANYAE 1090

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTN-TLF 302
                  + +      IL   FS +GK+ + +  +D+    +  D+ +    +  T    F
Sbjct: 1091 IRTLKGRVLAQHVDAILDVSFSHDGKQLV-TASRDKTAISW--DVSTGNPNKEFTEGHAF 1147

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +  SA + PD  ++   +  +   +++ +   G++ KR   +          S    L+ 
Sbjct: 1148 LASSAVFLPDGKRLA-TAAVDNSVRIWDI-QTGTEHKR--FEHTGRSAAIDVSFDSKLLV 1203

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             T    +   I  +   G   + L    S + A   SP  +   +    D      L+ +
Sbjct: 1204 -TGSDEKTVRIWDI-ATGELLKELSGHHSEVSAVAISPDKK---YCVSGDARGHCMLWDV 1258

Query: 422  D-------LNGRNETLIN 432
            +       L+G    +  
Sbjct: 1259 EAGKLLHKLSGHTRRITA 1276



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 48/115 (41%), Gaps = 7/115 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + ++SG   N+  + D D A  + +       +    FSP+  + A+   DD       L
Sbjct: 1591 KRLISGSEDNTAIIWDIDTA-KKTVLSGHTAPVASVVFSPDDSR-AFTASDDG---TAKL 1645

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATE 295
             DT   +    + +    + +  FS NG+    +  +D    ++ +VD ++ A +
Sbjct: 1646 WDTDTGKEILTLSSHAQGVTSVDFSPNGRFVA-TGSQDGQAILWLTVDWKNKAPQ 1699



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 55/355 (15%), Positives = 117/355 (32%), Gaps = 60/355 (16%)

Query: 109  QVLVTGRVIKEGKDRLRVEF----RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--- 161
            + +++    K+GK  L   +    RLWDVK   Q+   +++     W   A+  +D+   
Sbjct: 871  EGVLSISFSKDGKRLLTSSYDKTARLWDVKTGDQL--NRYWGH-NWWVWDANFSTDEKRI 927

Query: 162  ----------IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
                      I+ + TGEKG           +   G + ++   +D D  ++      R 
Sbjct: 928  VTASQDGTAVIWNTETGEKGA--------PFTGHQGPVYSAHFSLDADSTHVVTSGYDRR 979

Query: 212  QILFEPR--FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             +L+ P      +  K+     ++      +       ++ +             F+++G
Sbjct: 980  ILLWRPEDIVPYDFSKLVSGKENEPPAYVAFEGHQESVQSVE-------------FTNDG 1026

Query: 270  KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            K   IS   D  + ++ ++  + A +          SA    D   I+  S      QL 
Sbjct: 1027 KML-ISASHDNTVKLWDIE-TTKALKTFRGHDSWVQSAMILNDGKWILSASH---DAQLK 1081

Query: 330  VMQSNGSDQ-----KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +       +      R+      +  D  +S  G  +          +  V    G+  +
Sbjct: 1082 LWNIANYAEIRTLKGRVLAQHVDAILDVSFSHDGKQLVTASRDKTAISWDV--STGNPNK 1139

Query: 385  LLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               E       +  + P G+ L  +     D   +++ I     ++   +T   A
Sbjct: 1140 EFTEGHAFLASSAVFLPDGKRLATAAV---DNSVRIWDIQTGTEHKRFEHTGRSA 1191


>gi|73670310|ref|YP_306325.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
 gi|72397472|gb|AAZ71745.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
          Length = 960

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 88/238 (36%), Gaps = 25/238 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           SR+   F P    ++        +  +I    L  +       ++G + ++         
Sbjct: 702 SRNNSEFYPAIYNDR----IVWLESGNIYLYNLSTSTKTLISNQLGIYPAIY-------- 749

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKE 326
           G +     + +    IY  D+ S+   R+TN    +   +     ++IV+ES R   G  
Sbjct: 750 GDKIAWQGECNGDC-IYMYDVSSSKQARITNNKSSSYLPAVY--GNRIVWESRRIANGSS 806

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            ++    +   + +IS D+       ++   G+ I +  +      I +     S++  +
Sbjct: 807 NIFTYDLSTEKETQISTDESYQQSPAIY---GNRIVWGDYRNGNKDIYMYNLSTSEKIQI 863

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGD---TGSKLYSIDLNGRNETLINTPAYASDPQ 441
                   P+    G  +++   ++G      S +Y  DL+ + ET I T   AS P 
Sbjct: 864 STSGLAFDPSI--YGNRIVWRDSRNGKEYIENSNIYMYDLSTKKETQITTSGPASSPA 919


>gi|291297932|ref|YP_003509210.1| WD40 domain-containing protein [Stackebrandtia nassauensis DSM
           44728]
 gi|290567152|gb|ADD40117.1| WD40 domain protein beta Propeller [Stackebrandtia nassauensis DSM
           44728]
          Length = 309

 Score = 90.1 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 83/246 (33%), Gaps = 13/246 (5%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
              DG + + L   +D    +P  SP+ +KV +  +   D  +       ++     +  
Sbjct: 66  WLVDGEH-KPLNKDKDIQAQDPSLSPDGRKVLFEGF-HGDGGKYVNKKLIMNTDGSGLKI 123

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F   I  P +S NGKR     +  +   I   +        +      N    +S D  +
Sbjct: 124 FGEGISTPVWSPNGKRLAY--RDTDRNTIMVSNPDGTDEREIAEDAASN--PVWSADGEK 179

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + +     G   +   +  G          E +     W P G+ +  +   G+   +  
Sbjct: 180 LAWI--PNGANAVRWAEPEGKKSGMAQMLGEQAITV-AWQPDGESVVVSLVKGDDAHLYR 236

Query: 376 MKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT 433
           +   D  +  LL ED+   AP   P G       K+     ++  S+D   G++E L   
Sbjct: 237 LNLSDNKEPELLAEDAT--APFALPDGTIGARVDKRGDGDYNQYVSVDPKTGKSEDLAKI 294

Query: 434 PAYASD 439
           P     
Sbjct: 295 PGQHPS 300



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 11/119 (9%)

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI----GVMKKDGSQERL 385
           V      + K +++DK+    DP  SP G  + F  F G+         +M  DGS  ++
Sbjct: 64  VYWLVDGEHKPLNKDKDIQAQDPSLSPDGRKVLFEGFHGDGGKYVNKKLIMNTDGSGLKI 123

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             E   +  P WSP+G+ L +   +D D  + +   + +G +E  I   A AS+P W  
Sbjct: 124 FGEG--ISTPVWSPNGKRLAY---RDTDRNT-IMVSNPDGTDEREIAEDA-ASNPVWSA 175



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 75/211 (35%), Gaps = 21/211 (9%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           ++LF       G   N   +M+ DG+ ++         +  P +SPN +++AY   D   
Sbjct: 94  KVLFEGFHGDGGKYVNKKLIMNTDGSGLKIFGEG----ISTPVWSPNGKRLAYRDTDRNT 149

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-- 293
           I    ++        + I    +    P +S++G++       + A  +   + +     
Sbjct: 150 I----MVSNPDGTDEREIAEDAASN--PVWSADGEKLAWI--PNGANAVRWAEPEGKKSG 201

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             ++     I +  ++ PD   +V    +     LY +  + + +  +  +   + F   
Sbjct: 202 MAQMLGEQAITV--AWQPDGESVVVSLVKGDDAHLYRLNLSDNKEPELLAEDATAPFAL- 258

Query: 354 WSPQGDLIAFTKFSG-EKFAIGV-MKKDGSQ 382
             P G + A     G   +   V +     +
Sbjct: 259 --PDGTIGARVDKRGDGDYNQYVSVDPKTGK 287


>gi|292654992|ref|YP_003534889.1| prolyl oligopeptidase family protein [Haloferax volcanii DS2]
 gi|291372250|gb|ADE04477.1| prolyl oligopeptidase family protein [Haloferax volcanii DS2]
          Length = 608

 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 12/208 (5%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               +R  N RS   A  FS++G+R    +       +++VD      E+ T        
Sbjct: 3   TYDIERYLNIRSAYGA-SFSADGERLSFLMDTTGVPQVWTVDSPGAWPEQRTFYEERVTF 61

Query: 307 ASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           AS+SP+  ++ F  D  G E  QL+ ++ +    + +++  +A +    WS  G+  AFT
Sbjct: 62  ASWSPERPELAFGMDNGGNERAQLFRLEPDTGVIENLTEHPDAKHRWGGWSHDGERFAFT 121

Query: 365 --KFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLY 419
             +     F + V  +DG+     LV + +       +SP    LI  ++   +    + 
Sbjct: 122 SNRRDHAVFDVYVQARDGTGTDTELVHEGDGWLTVGGFSPDDSKLI-VQEAYSNFDQDVS 180

Query: 420 SIDL-NGRNETLINTPAYAS--DPQWVG 444
            +DL  G    L           P+W  
Sbjct: 181 VLDLATGELTHLTPHQGTVRFQSPEWGP 208



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 83/267 (31%), Gaps = 12/267 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVYLM-D 243
            G  +  L  ++ D   I  LT   D       +S + ++ A+ +   +  +  VY+   
Sbjct: 78  GGNERAQLFRLEPDTGVIENLTEHPDAKHRWGGWSHDGERFAFTSNRRDHAVFDVYVQAR 137

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLF 302
                  + +      +    FS +  + ++     +   D+  +DL +     LT    
Sbjct: 138 DGTGTDTELVHEGDGWLTVGGFSPDDSKLIVQEAYSNFDQDVSVLDLATGELTHLTPHQG 197

Query: 303 INI--SASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                S  + PD   +   +D      +L   +    +   +    +             
Sbjct: 198 TVRFQSPEWGPDGENVYMVTDCGSDTLELVRYELASGEFTTVETGGDHELDGLSIDHDSR 257

Query: 360 LIAFTKFSGEK-----FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            + +++            +    +  +  +  + +      ++SP G     +     DT
Sbjct: 258 RLVYSRNVEGYTELTFGELTAPDRIDALPQPDLPNGVAGGVSFSPDGERAAVTVTASADT 317

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQ 441
            + +Y ++L   +       A A  P+
Sbjct: 318 -ANVYVVELATGDAERWTLAATAGIPR 343



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 76/231 (32%), Gaps = 11/231 (4%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  +D  GA     T   +++ F   +SP + ++A+   +  +               +
Sbjct: 38  QVWTVDSPGAWPEQRTFYEERVTFA-SWSPERPELAFGMDNGGNERAQLFRLEPDTGVIE 96

Query: 252 RIGNFRSMI-LAPRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINIS 306
            +            +S +G+R   +  + +           D     TE +         
Sbjct: 97  NLTEHPDAKHRWGGWSHDGERFAFTSNRRDHAVFDVYVQARDGTGTDTELVHEGDGWLTV 156

Query: 307 ASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFT 364
             +SPD S+++ + +     + + V+     +   ++  +    F  P W P G+ +   
Sbjct: 157 GGFSPDDSKLIVQEAYSNFDQDVSVLDLATGELTHLTPHQGTVRFQSPEWGPDGENVYMV 216

Query: 365 KFSGEK-FAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDG 412
              G     +   +    +   +    + +    +     R L++SR  +G
Sbjct: 217 TDCGSDTLELVRYELASGEFTTVETGGDHELDGLSIDHDSRRLVYSRNVEG 267


>gi|145476531|ref|XP_001424288.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124391352|emb|CAK56890.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1180

 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 57/328 (17%), Positives = 109/328 (33%), Gaps = 55/328 (16%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G ++  G D   +  RLWD+K   QI            R   H   D +        G  
Sbjct: 273 GSIVSSGSDDQSI--RLWDIKSGLQIF-----------RLYGHR--DRVISICFSSDG-- 315

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    ++ S     ++C+ D      + +       +    FSP+   +A  + D 
Sbjct: 316 --------RTLASSSHDRTVCLWDVKTRKKKLILEGHSDSVLAVSFSPDGTILATGSED- 366

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L +         +      + +  FS +G     S  +D ++ ++  D+++  
Sbjct: 367 ---FSICLWEVMTGLQKSILIGHDYAVYSVCFSPDGTTIA-SGSQDNSICLW--DVKTGQ 420

Query: 294 TE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            + +L     I  +  +SPD S +   SD      + +      +QK             
Sbjct: 421 QKSKLNGHDRIVGTVCFSPDGSILASGSD---DRLICLWDVQTGEQKSKLVGHGNCVSSA 477

Query: 353 VWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +SP G ++A   +         K  +     DG  + +L       +  +SP   SL  
Sbjct: 478 CFSPNGTILASGSYDNSIILWDVKIGLQKHNLDGPNDAVL-------SVCFSPDATSLA- 529

Query: 407 SRKKDGDTGSKLYSIDL-NGRNETLINT 433
                G + S ++  D   GR +  +N 
Sbjct: 530 ----SGCSDSSIHLWDAKTGRQKLKLNG 553



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 109/326 (33%), Gaps = 50/326 (15%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     RLWDV+  +Q             +   H+            +G  +     
Sbjct: 823  ASGSDDKSIRLWDVRTGQQ-----------KLKFDGHS------------RGVLSLCFSP 859

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                + SG    S+C+ D     ++Y        ++   FSP+   +A  + D+     +
Sbjct: 860  KDNILASGGRDMSICLWDVKTQQLKYKLDGHTNSVWSVCFSPDGTALASGSVDN----SI 915

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLT 298
             L + +I +   ++      +    FS +G     S  KD+++ ++  ++++   + +L 
Sbjct: 916  RLWNLKIRQLKFKLDGHTDSVWQVCFSPDGTTIA-SSSKDKSIRLW--NVKTGQQKFKLN 972

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   S  +SPD   +   S       + +       QK++            +SP G
Sbjct: 973  GHSNCVNSVCFSPDGITLASGS---ADNSIRLWNVRTGQQKQMLNGHSNQINSVCFSPDG 1029

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLI------------ 405
              +A            V    G Q+  L   S+   +  +S +G ++             
Sbjct: 1030 STLASGSSDNSIVLWNVQ--TGQQQSQLNGHSDCINSICFSSNGTTIASCSDDKSIRLWN 1087

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETLI 431
            F  + +  +   +Y  D+ G  +T +
Sbjct: 1088 FQTRSEIKSSDNIYK-DIQGYIKTPL 1112



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 61/330 (18%), Positives = 110/330 (33%), Gaps = 56/330 (16%)

Query: 108 AQVLVTGRVIKEGK----DRLRVEFRLWDVKDR--KQIIGKKFFSSPASWRKIAHTISDD 161
           +  ++      +G             LW+V     K I+             I H  +  
Sbjct: 345 SDSVLAVSFSPDGTILATGSEDFSICLWEVMTGLQKSIL-------------IGHDYA-- 389

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +Y       G           ++ SG   NS+C+ D      +      D+I+    FSP
Sbjct: 390 VYSVCFSPDG----------TTIASGSQDNSICLWDVKTGQQKSKLNGHDRIVGTVCFSP 439

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   +A  + D      + L D +      ++    + + +  FS NG   L S   D +
Sbjct: 440 DGSILASGSDDR----LICLWDVQTGEQKSKLVGHGNCVSSACFSPNGT-ILASGSYDNS 494

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKR 340
           + ++ V +       L       +S  +SPD++ +    SD      +++  +    QK 
Sbjct: 495 IILWDVKI-GLQKHNLDGPNDAVLSVCFSPDATSLASGCSDSS----IHLWDAKTGRQKL 549

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWS 398
                        +SP G  +A     G   +I +      Q+  +L      +Q+  +S
Sbjct: 550 KLNGHNNVVMSVCFSPDGQTLA---SGGGDNSIRLWDVKSGQQISKLDGHSEWIQSVRFS 606

Query: 399 PSGRSLIFSRK---------KDGDTGSKLY 419
           P G  L  S           K G   S+LY
Sbjct: 607 PDGTLLASSSNDFSILLWDVKTGQQYSQLY 636



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 87/227 (38%), Gaps = 16/227 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++VSG   NS+ + +      +         +    FSP+   V+  + D      + L
Sbjct: 232 NTLVSGSQDNSIRLWNVKTGEQKSKLDGHTNNVNTVCFSPDGSIVSSGSDDQ----SIRL 287

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D +      R+   R  +++  FSS+G+    S   D  + ++  D+++   + +    
Sbjct: 288 WDIKSGLQIFRLYGHRDRVISICFSSDGRTLA-SSSHDRTVCLW--DVKTRKKKLILEGH 344

Query: 302 FINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             ++ A S+SPD + +   S+      + + +     QK I    + + +   +SP G  
Sbjct: 345 SDSVLAVSFSPDGTILATGSE---DFSICLWEVMTGLQKSILIGHDYAVYSVCFSPDGTT 401

Query: 361 IAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
           IA          I +      Q+  +L   D  +    +SP G  L 
Sbjct: 402 IASGSQDNS---ICLWDVKTGQQKSKLNGHDRIVGTVCFSPDGSILA 445



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 92/247 (37%), Gaps = 31/247 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                Q +    FSP+   +   + D+     + L + +      ++    + +    FS
Sbjct: 215 LDGHSQQVLSVCFSPDGNTLVSGSQDN----SIRLWNVKTGEQKSKLDGHTNNVNTVCFS 270

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFES-DREG 324
            +G   + S   D+++ ++  D++S     RL       IS  +S D   +   S DR  
Sbjct: 271 PDG-SIVSSGSDDQSIRLW--DIKSGLQIFRLYGHRDRVISICFSSDGRTLASSSHDRT- 326

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +       +K I +    S     +SP G ++A      E F+I + +     ++
Sbjct: 327 ---VCLWDVKTRKKKLILEGHSDSVLAVSFSPDGTILA---TGSEDFSICLWEVMTGLQK 380

Query: 385 --LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNE-------TLINTP 434
             L+  D  + +  +SP G ++       G   + +   D+  G+ +        ++ T 
Sbjct: 381 SILIGHDYAVYSVCFSPDGTTIA-----SGSQDNSICLWDVKTGQQKSKLNGHDRIVGTV 435

Query: 435 AYASDPQ 441
            ++ D  
Sbjct: 436 CFSPDGS 442



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 53/318 (16%), Positives = 107/318 (33%), Gaps = 40/318 (12%)

Query: 127 EFRLWDVKDRKQ---IIGKKFFSSPASWRKIAHTISDD----------------IYQSIT 167
             RLW+VK  KQ   + G   F     +     T++                  IY  I 
Sbjct: 662 SIRLWNVKTGKQKSKLYGHSSFVQTICFSFDGTTLASGGNDNAVFLWDVKTEQLIYDLIG 721

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +G  +      +  +VSG   N + + D                +++  FSP+   +A
Sbjct: 722 HNRGILSVCFSPYNTLLVSGGQDNFILLWDVKTGQQISKLEYHKSTVYQLCFSPDGTTLA 781

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             ++D      + L D        +     S IL+  FS +      S   D+++ ++  
Sbjct: 782 SCSHDK----SIRLYDVEKVLKQPKFHGHSSGILSICFSPDSATIA-SGSDDKSIRLW-- 834

Query: 288 DLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDK 345
           D+++   +   +     + S  +SP  + +       G++  + +        K      
Sbjct: 835 DVRTGQQKLKFDGHSRGVLSLCFSPKDNILA----SGGRDMSICLWDVKTQQLKYKLDGH 890

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRS 403
             S +   +SP G  +A          I +      Q +  ++          +SP G +
Sbjct: 891 TNSVWSVCFSPDGTALASGSVDNS---IRLWNLKIRQLKFKLDGHTDSVWQVCFSPDGTT 947

Query: 404 LIFSRKKDGDTGSKLYSI 421
           +  S K   D   +L+++
Sbjct: 948 IASSSK---DKSIRLWNV 962



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 97/299 (32%), Gaps = 44/299 (14%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              LWD K  +Q +               H   + +        G          +++ S
Sbjct: 536 SIHLWDAKTGRQKLKLN-----------GHN--NVVMSVCFSPDG----------QTLAS 572

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G   NS+ + D              + +   RFSP+   +A ++ D      + L D + 
Sbjct: 573 GGGDNSIRLWDVKSGQQISKLDGHSEWIQSVRFSPDGTLLASSSND----FSILLWDVKT 628

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINI 305
            +   ++   +  +    FS +G     S   D+++ ++  ++++   + +L        
Sbjct: 629 GQQYSQLYGHQQWVQTICFSPDGTTLA-SCSGDKSIRLW--NVKTGKQKSKLYGHSSFVQ 685

Query: 306 SASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +  +S D + +       G +  +++                       +SP   L+   
Sbjct: 686 TICFSFDGTTLA----SGGNDNAVFLWDVKTEQLIYDLIGHNRGILSVCFSPYNTLLV-- 739

Query: 365 KFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              G+   I +      Q+  +L    S +    +SP G +L        D   +LY +
Sbjct: 740 -SGGQDNFILLWDVKTGQQISKLEYHKSTVYQLCFSPDGTTLASCSH---DKSIRLYDV 794



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 59/157 (37%), Gaps = 12/157 (7%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           ++      +L+  FS +G   + S  +D ++ ++  ++++   +   +    N++   +S
Sbjct: 214 KLDGHSQQVLSVCFSPDGNTLV-SGSQDNSIRLW--NVKTGEQKSKLDGHTNNVNTVCFS 270

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD S     S     + + +       Q               +S  G  +A +      
Sbjct: 271 PDGSI---VSSGSDDQSIRLWDIKSGLQIFRLYGHRDRVISICFSSDGRTLASSSHDRT- 326

Query: 371 FAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
             + +      +++L++E  +    A ++SP G  L 
Sbjct: 327 --VCLWDVKTRKKKLILEGHSDSVLAVSFSPDGTILA 361


>gi|281410811|gb|ADA68818.1| HET-D [Podospora anserina]
          Length = 504

 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 96/283 (33%), Gaps = 21/283 (7%)

Query: 170 KGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G   + + F  +S  V SG    ++ + +    +           ++   FSP+ + VA
Sbjct: 172 HGGSVNSVAFSPDSKWVASGSTDRTIKIWEAATGSCTQTLEGHGGWVWSVAFSPDSKWVA 231

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D      + + +       + +      + +  FS + K    S   D  + I+  
Sbjct: 232 SGSADS----TIKIWEAATGSCTQTLEGHGGPVNSVAFSPDSKWVA-SGSDDHTIKIWEA 286

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
               + T+ L        S ++SPDS  +   SD      + + ++      +  +    
Sbjct: 287 -ATGSCTQTLEGHGGPVNSVTFSPDSKWVASGSD---DHTIKIWEAATGSCTQTLEGHGG 342

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
             +   +SP    +A +  +     I         + L     ++ +  +SP  + +   
Sbjct: 343 WVYSVAFSPDSKWVA-SGSADSTIKIWEAATGSCTQTLEGHGGSVNSVAFSPDSKWVASG 401

Query: 408 RKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
                D   K++        +TL      +N+  ++ D +WV 
Sbjct: 402 SD---DHTIKIWEAATGSCTQTLEGHGGPVNSVTFSPDSKWVA 441



 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 92/267 (34%), Gaps = 19/267 (7%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG   +++ + +    +           +    FSP+ + VA  + D      + + +
Sbjct: 20  VASGSDDHTIKIWEAATGSCTQTLEGHGGWVLSVAFSPDSKWVASGSADS----TIKIWE 75

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  + +      +L+  FS + K  ++S   D  + I+      + T+ L      
Sbjct: 76  AATGSCTQTLEGHGGWVLSVAFSPDSKW-VVSGSADSTIKIWEA-ATGSCTQTLEGYGGW 133

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               ++SPDS  +   S       + + ++      +  +    S     +SP    +A 
Sbjct: 134 VWLVAFSPDSKWVASGS---ADSTIKIWEAATGSCTQTLEGHGGSVNSVAFSPDSKWVA- 189

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +  +     I         + L      + +  +SP  + +        D+  K++    
Sbjct: 190 SGSTDRTIKIWEAATGSCTQTLEGHGGWVWSVAFSPDSKWVA---SGSADSTIKIWEAAT 246

Query: 424 NGRNETL------INTPAYASDPQWVG 444
               +TL      +N+ A++ D +WV 
Sbjct: 247 GSCTQTLEGHGGPVNSVAFSPDSKWVA 273



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 14/224 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG   +++ + +    +           +    FSP+ + VA  + D      + + +
Sbjct: 272 VASGSDDHTIKIWEAATGSCTQTLEGHGGPVNSVTFSPDSKWVASGSDDH----TIKIWE 327

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  + +      + +  FS + K    S   D  + I+      + T+ L      
Sbjct: 328 AATGSCTQTLEGHGGWVYSVAFSPDSKWVA-SGSADSTIKIWEA-ATGSCTQTLEGHGGS 385

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SPDS  +   SD      + + ++      +  +          +SP    +A 
Sbjct: 386 VNSVAFSPDSKWVASGSD---DHTIKIWEAATGSCTQTLEGHGGPVNSVTFSPDSKWVA- 441

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
                +   I + +         +E     + +  +SP  + + 
Sbjct: 442 --SGSDDHTIKIWEAATGSCTQTLEGHGGWVYSVAFSPDSKWVA 483



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 79/244 (32%), Gaps = 19/244 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ + VA  + D      + + +       + +      +L+  FS
Sbjct: 1   LEGHSGSVNSVAFSPDSKWVASGSDDH----TIKIWEAATGSCTQTLEGHGGWVLSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            + K    S   D  + I+      + T+ L       +S ++SPDS  +V  S      
Sbjct: 57  PDSKWVA-SGSADSTIKIWEA-ATGSCTQTLEGHGGWVLSVAFSPDSKWVVSGS---ADS 111

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + + ++      +  +      +   +SP    +A +  +     I         + L 
Sbjct: 112 TIKIWEAATGSCTQTLEGYGGWVWLVAFSPDSKWVA-SGSADSTIKIWEAATGSCTQTLE 170

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA------SDP 440
               ++ +  +SP  + +        D   K++        +TL     +        D 
Sbjct: 171 GHGGSVNSVAFSPDSKWVASGST---DRTIKIWEAATGSCTQTLEGHGGWVWSVAFSPDS 227

Query: 441 QWVG 444
           +WV 
Sbjct: 228 KWVA 231


>gi|75909181|ref|YP_323477.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75702906|gb|ABA22582.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 1367

 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 65/388 (16%), Positives = 139/388 (35%), Gaps = 49/388 (12%)

Query: 62   GGKVSEVVS-KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW---NSLGAQVLVTGRVI 117
            G +++E+   +D   S  F+   Q            +   Q W      G + +V+    
Sbjct: 966  GRQIAELQGHEDWVNSATFSPDGQRILTASRDETARLWNLQGWQIAKFQGHENVVSSATF 1025

Query: 118  KEGKDRLRV-----EFRLWDVKDRKQIIGKK------------------FFSSPASWRKI 154
                 R+         RLWD+   +QI   +                    +SP    ++
Sbjct: 1026 SPDGQRILTASPDKTARLWDL-QGRQIAELQGHENVVSSATFSPDGQRILTASPDKTARL 1084

Query: 155  AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                   I +    +   F++      + +++     +  + D  G  I  L       L
Sbjct: 1085 WDLQGRQIAELQGHKGWLFSAIFSPDGQRILTASDDKTARLWDLQGRQIAEL--GHKGWL 1142

Query: 215  FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            F   FSP+ Q++  A+ D     R++ +     R   +    ++++++  FS +G+R L 
Sbjct: 1143 FSATFSPDGQRILTASSD--STARLWNLQ---GREIAKFQGHKNLVISASFSPDGQRIL- 1196

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +   D+   ++   LQ     +        I+A +SPD  +I+  + R+   +L+     
Sbjct: 1197 TASSDKTARLWE--LQGREIAKFQGHEGDVITAIFSPDGQRIL-TASRDKIARLW--DLQ 1251

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-Q 393
            G +  +  Q  E      ++SP G  I             +    G +        +   
Sbjct: 1252 GREIAKF-QGHEDWVNSAIFSPDGQRILTASRDKTA---RLWDLQGREIAKFQGHEDWVN 1307

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + T+SP G+ ++ + +   D  ++L+ +
Sbjct: 1308 SATFSPDGQRILTASR---DKTARLWQV 1332



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/226 (21%), Positives = 84/226 (37%), Gaps = 27/226 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--- 261
            +    +  +    FSP+ Q++  A+ D    L         D   ++I  F+       
Sbjct: 683 TVMAGHENWVNSATFSPDGQRILTASSDKTARL--------WDLQGRQIAKFQGHESSVN 734

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +  FS +G+R L +   D+   ++  DLQ     +        ISA++SPD  +I+  S 
Sbjct: 735 SATFSPDGQRIL-TASSDKTARLW--DLQGRQIAKFQGHESSVISATFSPDGQRILTLS- 790

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G     +    G     + Q  E       +SP G  I             +    G 
Sbjct: 791 --GDRTTRLWDLQGRQIAEL-QGHEGWVRSATFSPDGQRILTASVDETA---RLWDLQGR 844

Query: 382 QERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           Q        S L + T+SP G+ ++ +     D  ++L+  DL GR
Sbjct: 845 QIAKFQGHKSWLFSATFSPDGQRILTASS---DKTARLW--DLQGR 885



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 64/316 (20%), Positives = 118/316 (37%), Gaps = 43/316 (13%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWD+   +QI   KF    +S   I+ T S D  Q I    GD  +R+  +    ++  
Sbjct: 755  RLWDL-QGRQIA--KFQGHESSV--ISATFSPD-GQRILTLSGDRTTRLWDLQGRQIA-- 806

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                                  +  +    FSP+ Q++  A+ D+       L D +  R
Sbjct: 807  -----------------ELQGHEGWVRSATFSPDGQRILTASVDE----TARLWDLQ-GR 844

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
               +    +S + +  FS +G+R L +   D+   ++  DLQ     +        ISA+
Sbjct: 845  QIAKFQGHKSWLFSATFSPDGQRIL-TASSDKTARLW--DLQGRQIAKFQGHENSVISAT 901

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPD  +I+  S     +   +    G     + Q  E       +SP G  I       
Sbjct: 902  FSPDGQRILTLSV---DKTARLWDLQGRQIAEL-QGHEDWVNSATFSPDGQRILTASSDK 957

Query: 369  EKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKL--YSIDLNG 425
                  +    G Q   L    +   + T+SP G+ ++ + + +      L  + I    
Sbjct: 958  TA---RLWDLQGRQIAELQGHEDWVNSATFSPDGQRILTASRDETARLWNLQGWQIAKFQ 1014

Query: 426  RNETLINTPAYASDPQ 441
             +E ++++  ++ D Q
Sbjct: 1015 GHENVVSSATFSPDGQ 1030



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 73/197 (37%), Gaps = 16/197 (8%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           Y     +          R    +    + + +  FS +G+R L +   D+   ++  DLQ
Sbjct: 663 YPAASPVLALQTILDNVRGMTVMAGHENWVNSATFSPDGQRIL-TASSDKTARLW--DLQ 719

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                +         SA++SPD  +I+  S     +   +    G    +  Q  E+S  
Sbjct: 720 GRQIAKFQGHESSVNSATFSPDGQRILTASS---DKTARLWDLQGRQIAKF-QGHESSVI 775

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
              +SP G  I             +    G Q   L   +  +++ T+SP G+ ++ +  
Sbjct: 776 SATFSPDGQRILTLSGDRTT---RLWDLQGRQIAELQGHEGWVRSATFSPDGQRILTASV 832

Query: 410 KDGDTGSKLYSIDLNGR 426
              D  ++L+  DL GR
Sbjct: 833 ---DETARLW--DLQGR 844


>gi|283850332|ref|ZP_06367621.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Desulfovibrio sp. FW1012B]
 gi|283574358|gb|EFC22329.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Desulfovibrio sp. FW1012B]
          Length = 698

 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 90/274 (32%), Gaps = 55/274 (20%)

Query: 218 RFSPNQQKVAYAT------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           R  P+ ++VA+          D D+     +       P+ +    +    P FS +G R
Sbjct: 35  RLGPDGRRVAFTVTRAAPEIRDGDLYSRIYLAEPGKAGPRPVTPETAQCEKPSFSPDGTR 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--------SDR- 322
                Q D+  +    +L +  T RL+      +  +++PD   +           + R 
Sbjct: 95  LAYLQQGDDTTEAVLQNLATGQTRRLSRGQGDVLDLAFAPDGKSLAMTIVAESKGAASRN 154

Query: 323 ------------EGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                        G   L+++   G    + +  D++   F  V+SP G  IAF   + +
Sbjct: 155 NDDADVEVLDAASGAAGLFLLPLVGHGGPRGLVTDRDVGNF--VFSPDGGRIAFETTAPD 212

Query: 370 ---------------------KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFS 407
                                   I ++         L + D +  +P +SP G+S+ + 
Sbjct: 213 GPPRGRRVTSASGAPAPGDAANTDIALVDVKTGAVTSLADTDGSEGSPRFSPDGKSVAYV 272

Query: 408 RKKDGD---TGSKLYSIDLNGRNETLINTPAYAS 438
                    + +++  +   G     ++    A 
Sbjct: 273 SMAAPGFYFSAARVMVVPAAGGAPRALSETPDAR 306



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 110/303 (36%), Gaps = 57/303 (18%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            +  +  G + + + + +   A  R +TP   Q   +P FSP+  ++AY      D    
Sbjct: 50  AAPEIRDGDLYSRIYLAEPGKAGPRPVTPETAQ-CEKPSFSPDGTRLAY--LQQGDDTTE 106

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---------VQKDEAMDIYSVDLQ 290
            ++        +R+   +  +L   F+ +GK   ++          + ++  D+  +D  
Sbjct: 107 AVLQNLATGQTRRLSRGQGDVLDLAFAPDGKSLAMTIVAESKGAASRNNDDADVEVLDAA 166

Query: 291 S-------------NATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQ--------- 327
           S                  L     +  +  +SPD  +I F  +  +G  +         
Sbjct: 167 SGAAGLFLLPLVGHGGPRGLVTDRDV-GNFVFSPDGGRIAFETTAPDGPPRGRRVTSASG 225

Query: 328 -----------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----- 371
                      + ++         ++ D + S   P +SP G  +A+   +   F     
Sbjct: 226 APAPGDAANTDIALVDVKTGAVTSLA-DTDGSEGSPRFSPDGKSVAYVSMAAPGFYFSAA 284

Query: 372 AIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + V+   G   R L E  +   +   WS  G ++ + R+  G T + ++++ ++G    
Sbjct: 285 RVMVVPAAGGAPRALSETPDARPELLGWSAGGEAV-YVREAQG-TCAVIWALPVDGGPPR 342

Query: 430 LIN 432
           L++
Sbjct: 343 LVS 345



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 61/164 (37%), Gaps = 27/164 (16%)

Query: 265 FSSNGKRALI-SVQKDE--------------------AMDIYSVDLQSNATERLTNTLFI 303
           FS +G R    +   D                       DI  VD+++ A   L +T   
Sbjct: 197 FSPDGGRIAFETTAPDGPPRGRRVTSASGAPAPGDAANTDIALVDVKTGAVTSLADTDGS 256

Query: 304 NISASYSPDSSQIVFESDRE-----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             S  +SPD   + + S           ++ V+ + G   + +S+  +A      WS  G
Sbjct: 257 EGSPRFSPDGKSVAYVSMAAPGFYFSAARVMVVPAAGGAPRALSETPDARPELLGWSAGG 316

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSG 401
           + +   +  G    I  +  DG   RL+ +  + + + T SP+G
Sbjct: 317 EAVYVREAQGTCAVIWALPVDGGPPRLVSDTPHVVASATLSPAG 360



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 15/146 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-- 264
               D     PRFSP+ + VAY +         Y    R+   P   G  R++   P   
Sbjct: 250 LADTDGSEGSPRFSPDGKSVAYVSMAAPGF---YFSAARVMVVPAAGGAPRALSETPDAR 306

Query: 265 -----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                +S+ G+   +   +     I+++ +       +++T  +  SA+ SP      F 
Sbjct: 307 PELLGWSAGGEAVYVREAQGTCAVIWALPVDGGPPRLVSDTPHVVASATLSPAGD--AFG 364

Query: 320 ---SDREGKEQLYVMQSNGSDQKRIS 342
              +D     + YV  ++    + +S
Sbjct: 365 LVLADSSLPPEAYVTPADRFAPRAVS 390



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 10/93 (10%)

Query: 356 PQGDLIAFTK-------FSGEKF-AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIF 406
           P G  +AFT          G+ +  I + +   +  R +  E +  + P++SP G  L +
Sbjct: 38  PDGRRVAFTVTRAAPEIRDGDLYSRIYLAEPGKAGPRPVTPETAQCEKPSFSPDGTRLAY 97

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            ++ D  T + L ++   G+   L        D
Sbjct: 98  LQQGDDTTEAVLQNL-ATGQTRRLSRGQGDVLD 129


>gi|113477377|ref|YP_723438.1| WD-40 repeat-containing protein [Trichodesmium erythraeum IMS101]
 gi|110168425|gb|ABG52965.1| WD-40 repeat [Trichodesmium erythraeum IMS101]
          Length = 1599

 Score = 90.1 bits (222), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 98/258 (37%), Gaps = 20/258 (7%)

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            Q+ITG                ++     ++ + +R G  ++ LT   +  ++   FSP+ 
Sbjct: 1086 QTITGHDNWVYGIAFSPDGETIASASWKTVKLWNRQGKLLQTLT-GHENWVYGVAFSPDG 1144

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            + +A           V L + R  +  + I    + +    FS +GK    +   D+ + 
Sbjct: 1145 KTIA----TAGGDKTVKLWN-RQGKLLQTIIGHENWVYGVAFSPDGKTIA-TASGDKTVK 1198

Query: 284  IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            ++  + Q    + L +        ++S D   +   S   G + + +    G   + + +
Sbjct: 1199 LW--NRQGKLLQTLKDHDNWVYGVAFSLDGKTVATAS---GDKTVKLWNRQGKLLQTL-K 1252

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGR 402
              +   +   +SP  + IA          + +  + G   + L   ++++    +SP G+
Sbjct: 1253 GHDNWVYGVAFSPDKETIATAS---GDKTVKLWNRQGKLLQTLTGHENSVYGVAFSPDGK 1309

Query: 403  SLIFSRKKDGDTGSKLYS 420
            ++  +    GD   KL++
Sbjct: 1310 TIATAS---GDQTVKLWT 1324



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 94/253 (37%), Gaps = 21/253 (8%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             E   +     F  E++ +     ++ + +  G  ++ +T   D  ++   FSP+ + +A
Sbjct: 1050 HENSVYGIAFSFDGETIATAGADKTVKLWNPQGKLLQTIT-GHDNWVYGIAFSPDGETIA 1108

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A++    +        R  +  + +    + +    FS +GK    +   D+ + ++  
Sbjct: 1109 SASWKTVKLWN------RQGKLLQTLTGHENWVYGVAFSPDGKTIA-TAGGDKTVKLW-- 1159

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            + Q    + +          ++SPD   I   S   G + + +    G   + + +D + 
Sbjct: 1160 NRQGKLLQTIIGHENWVYGVAFSPDGKTIATAS---GDKTVKLWNRQGKLLQTL-KDHDN 1215

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIF 406
              +   +S  G  +A          + +  + G   + L   D+ +    +SP   ++  
Sbjct: 1216 WVYGVAFSLDGKTVATAS---GDKTVKLWNRQGKLLQTLKGHDNWVYGVAFSPDKETIAT 1272

Query: 407  SRKKDGDTGSKLY 419
            +    GD   KL+
Sbjct: 1273 AS---GDKTVKLW 1282



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 93/275 (33%), Gaps = 47/275 (17%)

Query: 178  LFVSESVVSGIIKNSLCVMDR-----DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
              +     +  I N+L V        D       T + +  +    FSP+++ +A  +YD
Sbjct: 940  AKIKPIGKASKITNALRVAVYSYDKDDEFREINRTQAHENWVNGIAFSPDEETIASGSYD 999

Query: 233  D----------------EDILRVYLMDTRIDRAPKRIGNFRS-----------MILAPRF 265
            +                     V  M    D    ++ N +             +    F
Sbjct: 1000 NTMKLWNHQGNLLQTLKGHENWVNGMAFSPDGGTVKLWNHQGKLLQTLKGHENSVYGIAF 1059

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S +G+    +   D+ + ++  + Q    + +T         ++SPD   I   S     
Sbjct: 1060 SFDGETIA-TAGADKTVKLW--NPQGKLLQTITGHDNWVYGIAFSPDGETIASAS----W 1112

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            + + +    G   + ++   E   +   +SP G  IA    +G    + +  + G   + 
Sbjct: 1113 KTVKLWNRQGKLLQTLT-GHENWVYGVAFSPDGKTIA---TAGGDKTVKLWNRQGKLLQT 1168

Query: 386  LVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            ++   N      +SP G+++  +    GD   KL+
Sbjct: 1169 IIGHENWVYGVAFSPDGKTIATAS---GDKTVKLW 1200


>gi|319786426|ref|YP_004145901.1| WD40-like beta Propeller containing protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317464938|gb|ADV26670.1| WD40-like beta Propeller containing protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 697

 Score = 90.1 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 91/294 (30%), Gaps = 76/294 (25%)

Query: 214 LFEPRFSPNQQKVAYATYDDED-------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+  +V +A  +  +        L +  + TR    PKR+      + +P FS
Sbjct: 40  VSSPVLSPDGARVVFARREIGEDLGKASTGLWIRDLRTRDLAPPKRLTPEGWSVNSPSFS 99

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-----FE-- 319
           ++GK       K  +  +YS+ +      +LT       S   SPD  +I      F   
Sbjct: 100 ADGKSVYFLSAKGGSQQLYSIPVAGGEPRQLTRYPLDIGSYKVSPDGKRIAVSMDVFTDC 159

Query: 320 ----------------SDREG--KEQLYV----MQSNGSDQKRISQDKEASYFDPV---- 353
                           S   G   +QL+V      ++G   +       +    P     
Sbjct: 160 GADLDCTVSRLDKREKSKASGVVYDQLFVRHWDTWADGRHSRLFVTTPASGDKAPAPVLV 219

Query: 354 -----------------------WSPQGDLIAFTKFS-------GEKFAIGVMKKDGSQE 383
                                  WSP G  + F+             F + + + DG   
Sbjct: 220 GAGRNEPVGHVPSRPFGGSDEYTWSPDGKSLVFSMRVADRQEPWSTNFDLYLYR-DGQPL 278

Query: 384 RLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLIN 432
           + L     +    P +S  G++L +   K     +    L ++DL       I 
Sbjct: 279 KNLTASNPAWDTGPVFSADGKTLYYRAMKRPGFEADRFGLMAMDLASGKAREIA 332



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 68/189 (35%), Gaps = 10/189 (5%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPK 251
           + RDG  ++ LT S       P FS + + + Y          D   +  MD    +A +
Sbjct: 271 LYRDGQPLKNLTASNPAWDTGPVFSADGKTLYYRAMKRPGFEADRFGLMAMDLASGKARE 330

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
              ++         S++GK    + Q      ++ VD+ S   E++     I+   S+  
Sbjct: 331 IARSWDRSADGIVLSADGKAIYTTAQHLGQHPLFKVDMASGKVEQVVGEGTIS---SFDI 387

Query: 312 DSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
               + F   S R G +      +N + Q+ I+        D  +    +   F  ++ E
Sbjct: 388 AGDTLAFTRNSLRSGDQLFTTSLANPARQRAITPSAGEMLPDVAFG-DYEQFTFAGWNNE 446

Query: 370 KFAIGVMKK 378
                V+K 
Sbjct: 447 TVHGYVVKP 455


>gi|162453807|ref|YP_001616174.1| hypothetical protein sce5531 [Sorangium cellulosum 'So ce 56']
 gi|161164389|emb|CAN95694.1| hypothetical protein sce5531 [Sorangium cellulosum 'So ce 56']
          Length = 458

 Score = 90.1 bits (222), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 75/174 (43%), Gaps = 14/174 (8%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLY 329
           R       D    ++++DL +    +LT     NI+ ++  D  +I F S+R+G   +++
Sbjct: 127 RIAFMRSGD----VFAMDLATGVEAQLTRKTQRNIAPTFLGDGRRIAFLSNRDGMAWRVF 182

Query: 330 VMQSNGSDQKRISQDKEASYFDPVW--SPQGDLIAFTKF-----SGEKFAIGVMKKDGSQ 382
           +M ++G++Q+ I+    A Y +P +  SP G  +A+              + +++     
Sbjct: 183 LMNADGTEQRPITGKFSAWYGEPSFAISPDGARVAYVARARAPSDEGLEELHLVEVASGD 242

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           ++ + + + L   T+SP G ++             L S+D+  R    +     
Sbjct: 243 DQRVGQPATLGECTFSPGGDAIHCVA--GEFDAEHLLSVDIATRRVRRLPDAGN 294



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 66/299 (22%), Positives = 110/299 (36%), Gaps = 39/299 (13%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATY-- 231
           RI F+S       +   + +M+ DG   R +T        EP F  SP+  +VAY     
Sbjct: 167 RIAFLSNR---DGMAWRVFLMNADGTEQRPITGKFSAWYGEPSFAISPDGARVAYVARAR 223

Query: 232 --DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
              DE +  ++L++       +R+G   ++     FS  G        + +A  + SVD+
Sbjct: 224 APSDEGLEELHLVEVASGDD-QRVGQPATLGEC-TFSPGGDAIHCVAGEFDAEHLLSVDI 281

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQD 344
            +    RL +      SA+ S    +++F +   G     + QL+    +G+  K +   
Sbjct: 282 ATRRVRRLPDAGNHMFSAARS-LGDRLLFSASPTGAFCCQRSQLFTTALDGTGIKGLGAF 340

Query: 345 KEASYFDPVWSPQGDLIAFT-KFSGEKF------AIGVMKKDGSQERLLVEDS-----NL 392
             A    P  SP+G  IA         F       I ++  +G  ER L         + 
Sbjct: 341 WVAGSMRPEVSPKGSQIAVAWSVREGGFGADYRNEISLLDANGGAERPLTSAFPRPFYSA 400

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSK-----LYSIDL--NGRNETLINTPAYASDPQWVG 444
             P+W+P  R L F+       G +     +  +D    G     I     AS   W  
Sbjct: 401 YEPSWAPDDRHLAFTLSLCPYLGCEPRIRSVVVVDTRDAGAVPAFIAYGGNAS---WSP 456



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 89/246 (36%), Gaps = 22/246 (8%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V +  G           ++      +    ++A+    D     V+ MD       + +
Sbjct: 96  WVKEYSGLGEPEAEKRPPRLRRAKELALASGRIAFMRSGD-----VFAMDLATGVEAQ-L 149

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMD-IYSVDLQSNATERLT-NTLFINISASY-- 309
                  +AP F  +G+R      +D     ++ ++        +T          S+  
Sbjct: 150 TRKTQRNIAPTFLGDGRRIAFLSNRDGMAWRVFLMNADGTEQRPITGKFSAWYGEPSFAI 209

Query: 310 SPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD +++ +       SD EG E+L++++    D +R+   + A+  +  +SP GD I  
Sbjct: 210 SPDGARVAYVARARAPSD-EGLEELHLVEVASGDDQRV--GQPATLGECTFSPGGDAIHC 266

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT---GSKLYS 420
                +   +  +     + R L +  N         G  L+FS    G      S+L++
Sbjct: 267 VAGEFDAEHLLSVDIATRRVRRLPDAGNHMFSAARSLGDRLLFSASPTGAFCCQRSQLFT 326

Query: 421 IDLNGR 426
             L+G 
Sbjct: 327 TALDGT 332



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 48/169 (28%), Gaps = 14/169 (8%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            + D      +  +   +  +   S +      ++ L     DG  I+ L          
Sbjct: 288 RLPDAGNHMFSAARSLGDRLLFSASPTGAFCCQRSQLFTTALDGTGIKGLGAFWVAGSMR 347

Query: 217 PRFSPNQQKVAYATYDDEDIL------RVYLMDTRIDRAPKRIGNFRS---MILAPRFSS 267
           P  SP   ++A A    E          + L+D            F         P ++ 
Sbjct: 348 PEVSPKGSQIAVAWSVREGGFGADYRNEISLLDANGGAERPLTSAFPRPFYSAYEPSWAP 407

Query: 268 NGKRALISVQKDEAMDI-----YSVDLQSNATERLTNTLFINISASYSP 311
           + +    ++     +         V + +     +   +    +AS+SP
Sbjct: 408 DDRHLAFTLSLCPYLGCEPRIRSVVVVDTRDAGAVPAFIAYGGNASWSP 456


>gi|170092675|ref|XP_001877559.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647418|gb|EDR11662.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1585

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 106/307 (34%), Gaps = 44/307 (14%)

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                    R+WDV+  + +IG              H               D+ + + + 
Sbjct: 889  SGSYGKTIRVWDVQTGQTVIG----------PLKGH--------------DDWVTSVSYS 924

Query: 181  SESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            S+    VSG    ++ V D + G ++ Y     +  +    FSPN + +   + D     
Sbjct: 925  SDGRHIVSGSRDKTIRVWDAQTGHSVMYPLKGHENCVTSVSFSPNGRHIVSGSRDG---- 980

Query: 238  RVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--T 294
             + L D +  ++ +  +      I +  FS +G R ++S   D+ + ++  D Q+     
Sbjct: 981  TIGLWDAQTGQSVRNALKGHDDWITSVAFSHDG-RCIVSGSWDKTIRVW--DAQTGQSVV 1037

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPV 353
            + L        S ++S D   IV  SD      + V  +          +  +       
Sbjct: 1038 DPLKGHDASVTSVAFSHDGRHIVSGSD---DMTVRVWNAQTGQSVIEPLKGHDHWVTSVA 1094

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            +SP G  I    +              + + L    + + +  +SP G+ ++      GD
Sbjct: 1095 FSPDGKHIVSGSYDKTVRVWHTQTGQRAPDPLKGHVNYITSAAFSPDGKHIV---SGSGD 1151

Query: 414  TGSKLYS 420
               +++ 
Sbjct: 1152 GTVRVWD 1158



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 92/252 (36%), Gaps = 20/252 (7%)

Query: 164  QSITGEKGDFNSRILFVSES-----VVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEP 217
            +       D +S +  VS S     +VSG    ++ V D + G N+       D ++   
Sbjct: 819  EKCFLRLADHDSGVASVSFSPDGRHIVSGSWDKTIRVWDAQTGQNVIDPLKGHDDLVTSV 878

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FS   + +   +Y     +RV+ + T         G     + +  +SS+G+  + S  
Sbjct: 879  AFSLVGRHIVSGSY--GKTIRVWDVQTGQTVIGPLKG-HDDWVTSVSYSSDGRHIV-SGS 934

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            +D+ + ++      +    L        S S+SP+   IV  S R+G   + +  +    
Sbjct: 935  RDKTIRVWDAQTGHSVMYPLKGHENCVTSVSFSPNGRHIVSGS-RDGT--IGLWDAQTGQ 991

Query: 338  QKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQ 393
              R +      +     +S  G  I    +      I V      Q     L   D+++ 
Sbjct: 992  SVRNALKGHDDWITSVAFSHDGRCIVSGSWDKT---IRVWDAQTGQSVVDPLKGHDASVT 1048

Query: 394  APTWSPSGRSLI 405
            +  +S  GR ++
Sbjct: 1049 SVAFSHDGRHIV 1060



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 74/205 (36%), Gaps = 18/205 (8%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                D  +    FSP+ + +   + D    +R++   T         G+   +  +  FS
Sbjct: 1244 LTGHDNWVTSVAFSPDGRHIISGSCD--KTIRMWDAQTGQSVMNPLKGHDHYVN-SVAFS 1300

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREG 324
             NG+  + S  +D+ + ++  D Q+  +    L        S ++SPD   IV  S    
Sbjct: 1301 PNGRHIV-SGSRDKTIIVW--DAQTGQSVMDPLKGHDHYVTSVAFSPDGRHIVSGSY--- 1354

Query: 325  KEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + V  +          +  +       +SP G  I      G    + V  +   Q 
Sbjct: 1355 DKTVRVWDAKTGQSVVNPLKGHDNCVTSAAFSPDGRHIVSGSSDGT---VRVWDEKTGQS 1411

Query: 384  RL-LVEDSNLQ--APTWSPSGRSLI 405
             +  ++  +    +  +SP GR ++
Sbjct: 1412 TIDPLKGHDDWVTSAAFSPDGRYIV 1436



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 56/352 (15%), Positives = 115/352 (32%), Gaps = 57/352 (16%)

Query: 135  DRKQIIGKKFFSSPASWR-KIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNS 192
            D K I+   +  +   W  +      D     + G      S         +VSG    +
Sbjct: 1098 DGKHIVSGSYDKTVRVWHTQTGQRAPDP----LKGHVNYITSAAFSPDGKHIVSGSGDGT 1153

Query: 193  LCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD------------------- 232
            + V D + G ++       D  +    FSPN + +   +YD                   
Sbjct: 1154 VRVWDAQTGQSVMEPLKGHDHWVTSVAFSPNGRHIVSGSYDKTIRLWDAQAVTNRLGPKN 1213

Query: 233  DEDILRVYLMDTRIDRAPKR----------IGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             E ++   ++   I    +           +    + + +  FS +G+   IS   D+ +
Sbjct: 1214 KESVITRCIIGLVITGCNRLFNVLRLVIDPLTGHDNWVTSVAFSPDGRHI-ISGSCDKTI 1272

Query: 283  DIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             ++  D Q+       L        S ++SP+   IV  S     + + V  +       
Sbjct: 1273 RMW--DAQTGQSVMNPLKGHDHYVNSVAFSPNGRHIVSGSR---DKTIIVWDAQTGQSVM 1327

Query: 341  -ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APT 396
               +  +       +SP G  I    +      + V      Q  +     +     +  
Sbjct: 1328 DPLKGHDHYVTSVAFSPDGRHIVSGSYDKT---VRVWDAKTGQSVVNPLKGHDNCVTSAA 1384

Query: 397  WSPSGRSLIFSRKKDG-----DTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +SP GR ++ S   DG     D  +   +ID    ++  + + A++ D +++
Sbjct: 1385 FSPDGRHIV-SGSSDGTVRVWDEKTGQSTIDPLKGHDDWVTSAAFSPDGRYI 1435



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 87/239 (36%), Gaps = 23/239 (9%)

Query: 173  FNSRILFVSESVV--SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            + + + F  +     SG    ++ + D + G ++       D  +    FSPN + +   
Sbjct: 1250 WVTSVAFSPDGRHIISGSCDKTIRMWDAQTGQSVMNPLKGHDHYVNSVAFSPNGRHIVSG 1309

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            + D    + V+   T         G+    + +  FS +G+  + S   D+ + ++  D 
Sbjct: 1310 SRD--KTIIVWDAQTGQSVMDPLKGHDH-YVTSVAFSPDGRHIV-SGSYDKTVRVW--DA 1363

Query: 290  QSNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            ++       L        SA++SPD   IV  S  +G  +++  ++  S    + +  + 
Sbjct: 1364 KTGQSVVNPLKGHDNCVTSAAFSPDGRHIVSGSS-DGTVRVWDEKTGQSTIDPL-KGHDD 1421

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-------LVEDSNLQAPTWSP 399
                  +SP G  I    +      + V      Q+ +       L   SN   P  SP
Sbjct: 1422 WVTSAAFSPDGRYIVSGSYDRT---VRVWDTQTGQKIMDPFSVSCLSTSSNPVVPPISP 1477



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 76/206 (36%), Gaps = 19/206 (9%)

Query: 219 FSPNQQKVA-YATYDDEDILRVYL--MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           FSP+  K++ +     +  L V +  M+   ++   R+ +  S + +  FS +G+  + S
Sbjct: 788 FSPSDSKISMHFLKLFKKTLTVKMGKMEYWSEKCFLRLADHDSGVASVSFSPDGRHIV-S 846

Query: 276 VQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              D+ + ++  D Q+     + L     +  S ++S     IV  S   GK  + V   
Sbjct: 847 GSWDKTIRVW--DAQTGQNVIDPLKGHDDLVTSVAFSLVGRHIV--SGSYGKT-IRVWDV 901

Query: 334 NGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +  +       +S  G  I           I V         +     + 
Sbjct: 902 QTGQTVIGPLKGHDDWVTSVSYSSDGRHIVSGSRDKT---IRVWDAQTGHSVMYPLKGHE 958

Query: 393 Q---APTWSPSGRSLIFSRKKDGDTG 415
               + ++SP+GR ++ S  +DG  G
Sbjct: 959 NCVTSVSFSPNGRHIV-SGSRDGTIG 983


>gi|88803172|ref|ZP_01118698.1| putative peptidase/protease family protein [Polaribacter irgensii
           23-P]
 gi|88780738|gb|EAR11917.1| putative peptidase/protease family protein [Polaribacter irgensii
           23-P]
          Length = 1080

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 67/182 (36%), Gaps = 40/182 (21%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              +     S +G +   + + D    +Y V+ +    ++LT     +  A ++ + ++I
Sbjct: 21  PKWMRHSAISPDGTQIAFTYKGD----LYKVNSKGGNAQQLTFHSAHDYKAVWNKEGTKI 76

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            F S+R G   +YVM + G    R++      Y    +S     + F          G +
Sbjct: 77  AFASNRYGNFDIYVMNAGGGQATRLTYHSNDEY-PYTFSANDQEVLF----------GAL 125

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPA 435
           ++D ++ R     S                         S+LYS+ +  G+   L+  PA
Sbjct: 126 RQDTAEHRQYPHGSQ------------------------SELYSVPVTMGKVSQLLTIPA 161

Query: 436 YA 437
            A
Sbjct: 162 EA 163



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 97/265 (36%), Gaps = 39/265 (14%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR-APKRIGNFRSM 259
             IR+L+     +     F  + +   Y   +     ++ +  T  D+       +    
Sbjct: 261 HPIRFLSAGNGVL----SFGYDGE--LYTMQEGATPQKITVRITTQDKENTAEFVSIDGD 314

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           I     S NGK      +     +++   +  + T+RLT+T       S+ P+   +++ 
Sbjct: 315 IDEMAVSPNGKEIAFIARG----EVFVTAVDKSFTKRLTDTPQKESFISWGPEGKSVIYS 370

Query: 320 SDREGKEQLYVMQSNGSDQK-----------RISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           S+R+GK  +Y       ++             +  +   +Y    +SP G  IAF +   
Sbjct: 371 SERDGKWSVYKTTKIRKEEPFFYAATLLKEDALIANTHDNYLAQ-YSPDGKKIAFIENRR 429

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQA-------PTWSPSGRSLI--FSRKKDGDTGSKLY 419
               + +      +E  L+   +           TWSP  + L+  +S+     + S++ 
Sbjct: 430 T---LKIKDLKTKKEITLLNSEDFFHMRDGDKYFTWSPDSKWLLIDWSKTL---SNSEVL 483

Query: 420 SIDLNGRNETLINTPA-YASDPQWV 443
            +  +G     +N    Y S P+W+
Sbjct: 484 LMAADGSKRVNLNESGYYDSSPKWI 508



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/273 (16%), Positives = 89/273 (32%), Gaps = 48/273 (17%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +    +   K ++ +  +D  N          I      SPN +++A+    +       
Sbjct: 283 TMQEGATPQKITVRITTQDKENTAEFVSIDGDIDEM-AVSPNGKEIAFIARGE------V 335

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---- 296
            +        KR+ +         +   GK  + S ++D    +Y    ++    +    
Sbjct: 336 FVTAVDKSFTKRLTDTPQKESFISWGPEGKSVIYSSERDGKWSVY----KTTKIRKEEPF 391

Query: 297 -----------LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                      L      N  A YSPD  +I F  +R     L +       +K I+   
Sbjct: 392 FYAATLLKEDALIANTHDNYLAQYSPDGKKIAFIENR---RTLKIKDLKT--KKEITLLN 446

Query: 346 EASYFD-------PVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPT 396
              +F          WSP    +      +     + +M  DGS+   L E      +P 
Sbjct: 447 SEDFFHMRDGDKYFTWSPDSKWLLIDWSKTLSNSEVLLMAADGSKRVNLNESGYYDSSPK 506

Query: 397 WSPSGRSLIFSRKKD--------GDTGSKLYSI 421
           W   G+ +I++  ++        G + + +YS+
Sbjct: 507 WINKGKQMIWTSNRNGLKSYATSGSSQNDIYSM 539



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 79/235 (33%), Gaps = 35/235 (14%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            +    + +     SP+  ++A+      D+ +V           +++    +      +
Sbjct: 16  FSQQNPKWMRHSAISPDGTQIAFTY--KGDLYKVN----SKGGNAQQLTFHSAHDYKAVW 69

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--- 322
           +  G +   +  +    DIY ++       RLT         ++S +  +++F + R   
Sbjct: 70  NKEGTKIAFASNRYGNFDIYVMNAGGGQATRLTYHSNDEYPYTFSANDQEVLFGALRQDT 129

Query: 323 --------EGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--- 370
                     + +LY +    G   + ++   EA       S  G+++ +    G +   
Sbjct: 130 AEHRQYPHGSQSELYSVPVTMGKVSQLLTIPAEA----VQLSKSGEIMLYQDKKGGENEW 185

Query: 371 ---------FAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTG 415
                      + +     ++  +L  + +  + P +S   + L F  ++ G   
Sbjct: 186 RKHHTSAIARDLWMYNTITNKHTMLTSNIAEDRQPVFSEDEKDLYFLSERSGTFN 240



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 61/335 (18%), Positives = 112/335 (33%), Gaps = 93/335 (27%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H+  D  Y+++  ++G   ++I F S           + VM+  G     LT   +   +
Sbjct: 60  HSAHD--YKAVWNKEG---TKIAFASNR----YGNFDIYVMNAGGGQATRLTYHSND-EY 109

Query: 216 EPRFSPNQQKVAYAT----------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
              FS N Q+V +            Y       +Y +   + +  + +        A + 
Sbjct: 110 PYTFSANDQEVLFGALRQDTAEHRQYPHGSQSELYSVPVTMGKVSQLLTIP---AEAVQL 166

Query: 266 SSNGKRALISVQKDE------------AMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           S +G+  L   +K              A D++  +  +N    LT+ +  +    +S D 
Sbjct: 167 SKSGEIMLYQDKKGGENEWRKHHTSAIARDLWMYNTITNKHTMLTSNIAEDRQPVFSEDE 226

Query: 314 SQIVFESDREGK----------------------------------------EQLYVMQS 333
             + F S+R G                                          +LY MQ 
Sbjct: 227 KDLYFLSERSGTFNVHKLSLENPNQDEQLTSFKLHPIRFLSAGNGVLSFGYDGELYTMQE 286

Query: 334 NGSDQK---RISQDKEASYFDP----------VWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             + QK   RI+   + +  +             SP G  IAF         + V   D 
Sbjct: 287 GATPQKITVRITTQDKENTAEFVSIDGDIDEMAVSPNGKEIAFIARG----EVFVTAVDK 342

Query: 381 SQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDT 414
           S  + L +    ++  +W P G+S+I+S ++DG  
Sbjct: 343 SFTKRLTDTPQKESFISWGPEGKSVIYSSERDGKW 377



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 51/323 (15%), Positives = 106/323 (32%), Gaps = 49/323 (15%)

Query: 70  SKDL----QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
            KDL    +RS  FN+      K  + NP+   +   +     + L        G   L 
Sbjct: 226 EKDLYFLSERSGTFNV-----HKLSLENPNQDEQLTSFKLHPIRFL------SAGNGVLS 274

Query: 126 VEF--RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
             +   L+ +++           +       A  +S D         GD +   +  +  
Sbjct: 275 FGYDGELYTMQEGATPQKITVRITTQDKENTAEFVSID---------GDIDEMAVSPNGK 325

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            ++ I +  + V   D  +         Q      + P  + V Y++  D          
Sbjct: 326 EIAFIARGEVFVTAVD-KSFTKRLTDTPQKESFISWGPEGKSVIYSSERDGKWSVYKTTK 384

Query: 244 TRID----------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            R +          +    I N     LA ++S +GK+      +     +   DL++  
Sbjct: 385 IRKEEPFFYAATLLKEDALIANTHDNYLA-QYSPDGKKIAFIENR---RTLKIKDLKTKK 440

Query: 294 TERLTNTLFI------NISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKE 346
              L N+         +   ++SPDS  ++ + S      ++ +M ++GS +  +++   
Sbjct: 441 EITLLNSEDFFHMRDGDKYFTWSPDSKWLLIDWSKTLSNSEVLLMAADGSKRVNLNESGY 500

Query: 347 ASYFDPVWSPQGDLIAFTKFSGE 369
                P W  +G  + +T     
Sbjct: 501 Y-DSSPKWINKGKQMIWTSNRNG 522


>gi|294142361|ref|YP_003558339.1| hypothetical protein SVI_3590 [Shewanella violacea DSS12]
 gi|293328830|dbj|BAJ03561.1| hypothetical protein [Shewanella violacea DSS12]
          Length = 733

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 91/238 (38%), Gaps = 22/238 (9%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           D   F P  SP+ + +A++  D      R+ +M+    R    + +       P FS +G
Sbjct: 190 DGQEFSPVLSPDGKYLAFSQRDLGEKNWRIGMMEIE-SRLVVYLEDPMDSQGYPAFSPDG 248

Query: 270 KRALI-SVQKDEAMDIYSVDLQS---NATERLTN--TLFINISASYSPDSSQIVFES--- 320
            R    S   D    I  VD  S      +++T+      + S +++P    + +     
Sbjct: 249 SRIAYLSYNNDGGCKINVVDKHSRTFGKIQKITDCKRKLQSTSIAWNPSGQSLFYIDEDQ 308

Query: 321 --DREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGE-KFAIGV 375
             D   +++++ +  NG+++++I+Q        +    SP G  +A  +     +  + +
Sbjct: 309 QHDYHTEKKVFSVSLNGNNKQQITQPYSIGRGDYSISLSPDGKYLAMVRNVRWYQTQVIL 368

Query: 376 MKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +  +    + L   D  L    W+   RSLI+           L   DL   + T + 
Sbjct: 369 LSLETGIWQDLFTVDLLLHTVAWARDSRSLIYRSMTG-----NLARYDLESSSHTQLT 421



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 90/241 (37%), Gaps = 36/241 (14%)

Query: 229 ATYDDEDILRVYLMDTRIDRAP--KRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDI 284
           +++     L   ++D    +    KR+        +P  S +GK    S +        I
Sbjct: 160 SSWSAYQYLSSDMLDISHSQNTELKRLTFLDGQEFSPVLSPDGKYLAFSQRDLGEKNWRI 219

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQ---SNGSDQKR 340
             ++++S     L + +      ++SPD S+I + S + +G  ++ V+          ++
Sbjct: 220 GMMEIESRLVVYLEDPMDSQGYPAFSPDGSRIAYLSYNNDGGCKINVVDKHSRTFGKIQK 279

Query: 341 ISQ-DKEASYFDPVWSPQGDLIAFT-----KFSGEKFAIGVMKKDGSQERLLVE----DS 390
           I+   ++       W+P G  + +           +  +  +  +G+ ++ + +      
Sbjct: 280 ITDCKRKLQSTSIAWNPSGQSLFYIDEDQQHDYHTEKKVFSVSLNGNNKQQITQPYSIGR 339

Query: 391 NLQAPTWSPSGRSLIFSRKK------------DGDTGSKLYSIDLNGRNETLINTPAYAS 438
              + + SP G+ L   R              +      L+++DL      L++T A+A 
Sbjct: 340 GDYSISLSPDGKYLAMVRNVRWYQTQVILLSLETGIWQDLFTVDL------LLHTVAWAR 393

Query: 439 D 439
           D
Sbjct: 394 D 394



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 4/134 (2%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM--QSNGSDQKRISQDKEASY 349
           N   +   +  +N +AS + D S++ F S+R G  +L++     +G + K  S D+  S 
Sbjct: 477 NKVTKYIFSNGMNYTASTNLDGSKVAFVSNRTGVPELWLKSGDEDGIEVKLTSFDEIISI 536

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            D  +S  G  I   + +   F   +  K      L V D N+   +W PS  S++ +  
Sbjct: 537 KDISFSTSGRYIL-GRLNDSPFIYDITNKKIEHIDLKVND-NIYNVSWGPSSSSIVVTLD 594

Query: 410 KDGDTGSKLYSIDL 423
             G +  +L  I+ 
Sbjct: 595 TLGLSSLELIDINT 608



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 103/283 (36%), Gaps = 37/283 (13%)

Query: 188 IIKNSLCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             +  +  +  +G N + +T   S  +  +    SP+ + +A          +V L+   
Sbjct: 313 HTEKKVFSVSLNGNNKQQITQPYSIGRGDYSISLSPDGKYLAMVRNVRWYQTQVILLSLE 372

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + +     ++    ++ + +  +    +    ++   DL+S++  +LTN +   +
Sbjct: 373 TG-IWQDLFTVDLLLHTVAWARDSRSLIY---RSMTGNLARYDLESSSHTQLTNIMQSIV 428

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK----------------RISQDKEASY 349
           S   S  + +IV       K +++  +SN  ++                 ++++   ++ 
Sbjct: 429 SP-ISNQNGEIVAVLGEFFKTEIWRFESNFENESKKIKGKDKKNLENKVNKVTKYIFSNG 487

Query: 350 FDPVWSP--QGDLIAFTKFSGEKFAIGVM--KKDGSQERLLVEDS--NLQAPTWSPSGRS 403
            +   S    G  +AF         + +    +DG + +L   D   +++  ++S SGR 
Sbjct: 488 MNYTASTNLDGSKVAFVSNRTGVPELWLKSGDEDGIEVKLTSFDEIISIKDISFSTSGRY 547

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS--DPQWVG 444
           ++      G      +  D+  +    I+     +  +  W  
Sbjct: 548 IL------GRLNDSPFIYDITNKKIEHIDLKVNDNIYNVSWGP 584



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 7/70 (10%)

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-------NTPAY 436
           RL   D    +P  SP G+ L FS++  G+   ++  +++  R    +         PA+
Sbjct: 185 RLTFLDGQEFSPVLSPDGKYLAFSQRDLGEKNWRIGMMEIESRLVVYLEDPMDSQGYPAF 244

Query: 437 ASDPQWVGFM 446
           + D   + ++
Sbjct: 245 SPDGSRIAYL 254



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 55/167 (32%), Gaps = 15/167 (8%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ-SNATERLTNTLFI----NISASYSPD 312
            M      + +G +      +    +++           +LT+   I    +IS  +S  
Sbjct: 487 GMNYTASTNLDGSKVAFVSNRTGVPELWLKSGDEDGIEVKLTSFDEIISIKDIS--FSTS 544

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              I+    R   +  ++        + I      + ++  W P    I  T  +    +
Sbjct: 545 GRYIL---GRL-NDSPFIYDITNKKIEHIDLKVNDNIYNVSWGPSSSSIVVTLDTLGLSS 600

Query: 373 IGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           + ++  +  +  + L E        +S +G    F+++  G   + +
Sbjct: 601 LELIDINTGELIQSLAEGGEYGK--YSSNG-MFFFTKRSGGGLWTLI 644


>gi|242816729|ref|XP_002486804.1| WD-repeat protein, putative [Talaromyces stipitatus ATCC 10500]
 gi|218713269|gb|EED12693.1| WD-repeat protein, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1185

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 51/333 (15%), Positives = 107/333 (32%), Gaps = 48/333 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       +LWDVK  +++                H  SD I        G     
Sbjct: 652 STLASGSYDQTIKLWDVKTGQELQTLT-----------GH--SDLINSVAFSSDG----- 693

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG    ++ + D              + +    FS +   +A  ++D    
Sbjct: 694 -----STLASGSYDKTIKLWDMKTGQELQTLTGHSESVNSVAFSFDGSTLASGSHDR--- 745

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L + +  +  + +     +I +  FS +G     S      + ++  D+++    +
Sbjct: 746 -TIKLWNVKTGQELQTLTGHSDLINSVAFSFDGSTLA-SGSHYGTIKLW--DVKTGQELQ 801

Query: 297 -LTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            LT       S ++S D S +   S DR     + +       + +             +
Sbjct: 802 TLTGHSESVNSVTFSSDGSTLASGSHDRT----IKLWNVKTGQELQTLTGHSDLINSVAF 857

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGD 413
           S  G  +A +        +  +K  G + + L      + +  +S  G +L        D
Sbjct: 858 SSDGLTLA-SGSDDRTIKLWDVKT-GQEPQTLTGHSGWVNSVVFSSDGSTLASGSD---D 912

Query: 414 TGSKLYSIDLNGRNETL------INTPAYASDP 440
              KL+ +      +TL      +N+ A++SD 
Sbjct: 913 QTIKLWDVKTGQELQTLTGHSESVNSVAFSSDG 945



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 51/323 (15%), Positives = 109/323 (33%), Gaps = 42/323 (13%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    +LW+VK  +++  +         R +A   S D                  
Sbjct: 613 ASGSSDQTIKLWNVKTGQEL--QTLTGHSGWVRSVA--FSSD------------------ 650

Query: 180 VSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
              ++ SG    ++ + D   G  ++ LT   D I     FS +   +A  +YD      
Sbjct: 651 -GSTLASGSYDQTIKLWDVKTGQELQTLTGHSDLINSV-AFSSDGSTLASGSYDK----T 704

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
           + L D +  +  + +      + +  FS +G     S   D  + ++  ++++    + L
Sbjct: 705 IKLWDMKTGQELQTLTGHSESVNSVAFSFDGSTLA-SGSHDRTIKLW--NVKTGQELQTL 761

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T    +  S ++S D S +   S       + +       + +       S     +S  
Sbjct: 762 TGHSDLINSVAFSFDGSTLASGSHYG---TIKLWDVKTGQELQTLTGHSESVNSVTFSSD 818

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGS 416
           G  +A +        +  +K  G + + L   S+ + +  +S  G +L        D   
Sbjct: 819 GSTLA-SGSHDRTIKLWNVKT-GQELQTLTGHSDLINSVAFSSDGLTLASGSD---DRTI 873

Query: 417 KLYSIDLNGRNETLINTPAYASD 439
           KL+ +      +TL     + + 
Sbjct: 874 KLWDVKTGQEPQTLTGHSGWVNS 896



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/326 (15%), Positives = 109/326 (33%), Gaps = 42/326 (12%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        +LWDVK  +++  +       S   +  T S D               
Sbjct: 778  STLASGSHYGTIKLWDVKTGQEL--QTLTGHSESVNSV--TFSSD--------------- 818

Query: 177  ILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                  ++ SG    ++ + +   G  ++ LT   D I     FS +   +A  + D   
Sbjct: 819  ----GSTLASGSHDRTIKLWNVKTGQELQTLTGHSDLINSV-AFSSDGLTLASGSDDR-- 871

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
               + L D +  + P+ +      + +  FSS+G     S   D+ + ++  D+++    
Sbjct: 872  --TIKLWDVKTGQEPQTLTGHSGWVNSVVFSSDGSTLA-SGSDDQTIKLW--DVKTGQEL 926

Query: 296  R-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            + LT       S ++S D   +   S     + + +       + +      +      +
Sbjct: 927  QTLTGHSESVNSVAFSSDGLTLASGSS---DQTVKLWNVKTGQELQTLTGHLSWVRSVAF 983

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGD 413
            S  G  +A +    +   +  +K  G + + L   S+ + +  +S  G +L        D
Sbjct: 984  SSDGSTLA-SGSDDQTIKLWDVKT-GQELQTLTGHSDLINSVAFSSDGSTLASGSI---D 1038

Query: 414  TGSKLYSIDLNGRNETLINTPAYASD 439
                L+ +      +TL     +   
Sbjct: 1039 KTIILWDVKTGQELQTLTGHLGWVRS 1064



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 93/267 (34%), Gaps = 25/267 (9%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ SG    ++ + +                +    FS +   +A  +YD      + L 
Sbjct: 611 TLASGSSDQTIKLWNVKTGQELQTLTGHSGWVRSVAFSSDGSTLASGSYDQ----TIKLW 666

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D +  +  + +     +I +  FSS+G     S   D+ + ++ +       + LT    
Sbjct: 667 DVKTGQELQTLTGHSDLINSVAFSSDGSTLA-SGSYDKTIKLWDM-KTGQELQTLTGHSE 724

Query: 303 INISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              S ++S D S +   S DR     + +       + +             +S  G  +
Sbjct: 725 SVNSVAFSFDGSTLASGSHDRT----IKLWNVKTGQELQTLTGHSDLINSVAFSFDGSTL 780

Query: 362 AFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           A     G    I +      QE   L     ++ + T+S  G +L        D   KL+
Sbjct: 781 ASGSHYGT---IKLWDVKTGQELQTLTGHSESVNSVTFSSDGSTLASGSH---DRTIKLW 834

Query: 420 SIDLNGRNET------LINTPAYASDP 440
           ++      +T      LIN+ A++SD 
Sbjct: 835 NVKTGQELQTLTGHSDLINSVAFSSDG 861



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 86/234 (36%), Gaps = 18/234 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +N++ LT   + +     FS +   +A  + D      + L + +  +  + +      +
Sbjct: 588 SNLQTLTGHSESVNSV-AFSSDGLTLASGSSDQ----TIKLWNVKTGQELQTLTGHSGWV 642

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
            +  FSS+G     S   D+ + ++  D+++    + LT    +  S ++S D S +   
Sbjct: 643 RSVAFSSDGSTLA-SGSYDQTIKLW--DVKTGQELQTLTGHSDLINSVAFSSDGSTLASG 699

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     + + +       + +       S     +S  G  +A +        +  +K  
Sbjct: 700 SY---DKTIKLWDMKTGQELQTLTGHSESVNSVAFSFDGSTLA-SGSHDRTIKLWNVKT- 754

Query: 380 GSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           G + + L   S+ + +  +S  G +L            KL+ +      +TL  
Sbjct: 755 GQELQTLTGHSDLINSVAFSFDGSTLASGSHYG---TIKLWDVKTGQELQTLTG 805



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 78/218 (35%), Gaps = 15/218 (6%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           FSP Q  V   Y+    + I  +  ++       + +      + +  FSS+G     S 
Sbjct: 557 FSPKQSVVRKMYSDNIPKWICPLPQVEATWSSNLQTLTGHSESVNSVAFSSDGLTLA-SG 615

Query: 277 QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             D+ + ++  ++++    + LT       S ++S D S +   S     + + +     
Sbjct: 616 SSDQTIKLW--NVKTGQELQTLTGHSGWVRSVAFSSDGSTLASGSY---DQTIKLWDVKT 670

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQA 394
             + +             +S  G  +A   +  +   +  MK  G + + L     ++ +
Sbjct: 671 GQELQTLTGHSDLINSVAFSSDGSTLASGSYD-KTIKLWDMKT-GQELQTLTGHSESVNS 728

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +S  G +L        D   KL+++      +TL  
Sbjct: 729 VAFSFDGSTLASGSH---DRTIKLWNVKTGQELQTLTG 763



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 85/257 (33%), Gaps = 36/257 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G  +  G D   +  +LWDVK  +++  +       S   +A   S D            
Sbjct: 903  GSTLASGSDDQTI--KLWDVKTGQEL--QTLTGHSESVNSVA--FSSD------------ 944

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     ++ SG    ++ + +                +    FS +   +A  + D 
Sbjct: 945  -------GLTLASGSSDQTVKLWNVKTGQELQTLTGHLSWVRSVAFSSDGSTLASGSDDQ 997

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + L D +  +  + +     +I +  FSS+G     S   D+ + ++  D+++  
Sbjct: 998  ----TIKLWDVKTGQELQTLTGHSDLINSVAFSSDGSTLA-SGSIDKTIILW--DVKTGQ 1050

Query: 294  TER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              + LT  L    S ++S D S +   S     + + +       + +       S    
Sbjct: 1051 ELQTLTGHLGWVRSVAFSSDGSTLASGSS---DKTIKLWNVKTGQELQTLTGHSDSERSV 1107

Query: 353  VWSPQGDLIAFTKFSGE 369
             +S +  LI     +  
Sbjct: 1108 AFSSEDYLIPILHMNSN 1124


>gi|254416637|ref|ZP_05030388.1| hypothetical protein MC7420_5241 [Microcoleus chthonoplastes PCC
            7420]
 gi|196176603|gb|EDX71616.1| hypothetical protein MC7420_5241 [Microcoleus chthonoplastes PCC
            7420]
          Length = 1249

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 96/285 (33%), Gaps = 25/285 (8%)

Query: 145  FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV---VSGIIKNSLCVMDRDGA 201
              +      +     + I QS+ G K +     +     V    S   K  L  +   G 
Sbjct: 937  SGTEDGLVHLWTRQDNLIRQSLPGHKDEVTGVAVSPQGQVIASSSQDGKIRLWTVP--GQ 994

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             +      +D I     +SP+ Q +            V + + + +   +     + ++ 
Sbjct: 995  PLGQPFFGQDWITSI-AWSPDGQFLV----SGGKDGTVQVWNRQGNPIGQPFIGHQGVVF 1049

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFES 320
               FS +G+    S   D  + ++  + Q     +       +    ++SP+  +IV   
Sbjct: 1050 TVAFSPDGETIA-SGSGDGTIRVW--NRQGQPLGQPFRGHEGVVFDLAFSPNGERIV-SG 1105

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             R+G  +L+     G       +  +   F   +SP G+ IA     G    I +    G
Sbjct: 1106 GRDGTVRLW--NRQGELIGEPWRGHQGVVFAVAFSPDGETIASGSGDGT---IRLWNSQG 1160

Query: 381  --SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                + L      +++  +SP G  L    +   D   +L+ + +
Sbjct: 1161 QLRGQPLRGHQGAVRSLAFSPDGERLASGSQ---DKTVRLWDVRI 1202



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 87/245 (35%), Gaps = 20/245 (8%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            IR   P     +     SP  Q +A ++ D +  +R++ +  +    P      +  I +
Sbjct: 954  IRQSLPGHKDEVTGVAVSPQGQVIASSSQDGK--IRLWTVPGQPLGQP---FFGQDWITS 1008

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
              +S +G+  + S  KD  + ++  + Q N   +       +  + ++SPD   I   S 
Sbjct: 1009 IAWSPDGQFLV-SGGKDGTVQVW--NRQGNPIGQPFIGHQGVVFTVAFSPDGETIASGS- 1064

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              G   + V    G    +  +  E   FD  +SP G+ I      G    + +  + G 
Sbjct: 1065 --GDGTIRVWNRQGQPLGQPFRGHEGVVFDLAFSPNGERIVSGGRDGT---VRLWNRQGE 1119

Query: 382  --QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
               E        + A  +SP G ++       GD   +L++     R + L         
Sbjct: 1120 LIGEPWRGHQGVVFAVAFSPDGETIA---SGSGDGTIRLWNSQGQLRGQPLRGHQGAVRS 1176

Query: 440  PQWVG 444
              +  
Sbjct: 1177 LAFSP 1181



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 69/189 (36%), Gaps = 33/189 (17%)

Query: 106  LGAQVLV-TGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD 160
            +G Q +V T     +G            R+W    + Q +G+ F                
Sbjct: 1042 IGHQGVVFTVAFSPDGETIASGSGDGTIRVW--NRQGQPLGQPFRGHEG----------- 1088

Query: 161  DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
             ++       G          E +VSG    ++ + +R G  I         ++F   FS
Sbjct: 1089 VVFDLAFSPNG----------ERIVSGGRDGTVRLWNRQGELIGEPWRGHQGVVFAVAFS 1138

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+ + +A  + D      + L +++     + +   +  + +  FS +G+R   S  +D+
Sbjct: 1139 PDGETIASGSGDG----TIRLWNSQGQLRGQPLRGHQGAVRSLAFSPDGERLA-SGSQDK 1193

Query: 281  AMDIYSVDL 289
             + ++ V +
Sbjct: 1194 TVRLWDVRI 1202


>gi|254412251|ref|ZP_05026026.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
            PCC 7420]
 gi|196181217|gb|EDX76206.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
            PCC 7420]
          Length = 1673

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 59/296 (19%), Positives = 109/296 (36%), Gaps = 34/296 (11%)

Query: 130  LWDV---KDRKQIIGKKFFSSPASWRK-----IAHTISDDIYQSITGEKGDFNSRILFVS 181
            +WDV    + ++I       +   W K      +HT     Y+ +   +G  N  +L VS
Sbjct: 1334 VWDVSFSFNGERIASASADGTVKLWEKDSSTNGSHTPD---YRLLKTLQG-HNKEVLDVS 1389

Query: 182  ESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
             S              V    G   R         +F+   SP+ + +A A+ D  +I+R
Sbjct: 1390 LSQDGQLIATASYDTTVQLWTGNGRRLWILKHPDQVFDVSISPDGETIATASRD--NIVR 1447

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            ++  D    + P  + + R  +    FS +GK    S   D  + ++  D        L 
Sbjct: 1448 LWRFDGEWQQTP--LTDHRDWVRDVTFSPDGKIIA-SASDDTTVKLWKPD--GRLIGTLE 1502

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSP 356
                   S ++SPD   I   +  +   +L+ +       K I+             +SP
Sbjct: 1503 GHKSWVRSVAFSPDGQIIA-TASEDNTAKLWTI-----QGKYITTLAGHRDQVRSVAFSP 1556

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
             G  IA          + +  +DGS +R L    + ++  ++SP G++L  +   +
Sbjct: 1557 DGKTIATASDDKT---VKLWNRDGSLQRTLPRHRDGIRGVSFSPDGQTLALASASN 1609



 Score = 86.2 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 91/249 (36%), Gaps = 30/249 (12%)

Query: 129  RLWDVK---DRKQIIGKKFFSSPASW-----RKIAHTISDDIYQSITGEKGDFNSRILFV 180
             + DV    D + I    + ++   W     R       D ++       G         
Sbjct: 1384 EVLDVSLSQDGQLIATASYDTTVQLWTGNGRRLWILKHPDQVFDVSISPDG--------- 1434

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             E++ +    N + +   DG   +         + +  FSP+ + +A A+ D    ++++
Sbjct: 1435 -ETIATASRDNIVRLWRFDGEWQQTPLTDHRDWVRDVTFSPDGKIIASASDDT--TVKLW 1491

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              D R+      +   +S + +  FS +G+    +  +D    ++++  Q      L   
Sbjct: 1492 KPDGRLIGT---LEGHKSWVRSVAFSPDGQIIA-TASEDNTAKLWTI--QGKYITTLAGH 1545

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD   I   SD    + + +   +GS Q+ + + ++       +SP G  
Sbjct: 1546 RDQVRSVAFSPDGKTIATASD---DKTVKLWNRDGSLQRTLPRHRDG-IRGVSFSPDGQT 1601

Query: 361  IAFTKFSGE 369
            +A    S  
Sbjct: 1602 LALASASNT 1610



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 47/352 (13%), Positives = 113/352 (32%), Gaps = 40/352 (11%)

Query: 91   ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
            I         + WN    Q  +   +         V F         +++      S   
Sbjct: 1263 IATASQDNTVKVWNVENGQ--LQTTLTGHSNGVYDVNF-----LSENRLVSASADHSLKV 1315

Query: 151  WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG---------A 201
            W+    +   ++      E   ++    F  E + S     ++ + ++D           
Sbjct: 1316 WQLGKRSFKKNLN---GHEDIVWDVSFSFNGERIASASADGTVKLWEKDSSTNGSHTPDY 1372

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             +       ++ + +   S + Q +A A+YD        +     +     I      + 
Sbjct: 1373 RLLKTLQGHNKEVLDVSLSQDGQLIATASYDT------TVQLWTGNGRRLWILKHPDQVF 1426

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
                S +G+    +  +D  + ++  D +      LT+        ++SPD   I   SD
Sbjct: 1427 DVSISPDGETIA-TASRDNIVRLWRFDGEW-QQTPLTDHRDWVRDVTFSPDGKIIASASD 1484

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                  + + + +G     + +  ++      +SP G +IA          +  +   G 
Sbjct: 1485 ---DTTVKLWKPDGRLIGTL-EGHKSWVRSVAFSPDGQIIATASEDNTA-KLWTI--QGK 1537

Query: 382  QERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                L    + +++  +SP G+++  +     D   KL+  + +G  +  + 
Sbjct: 1538 YITTLAGHRDQVRSVAFSPDGKTIATASD---DKTVKLW--NRDGSLQRTLP 1584



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/285 (16%), Positives = 95/285 (33%), Gaps = 51/285 (17%)

Query: 130  LWDVK-------DRKQIIGKKFFSSPASWRK--------IAHTISDDIYQSITGEKG--- 171
            +WDV            I    +  +   W+          AH   D +        G   
Sbjct: 1030 VWDVSVLKNEDSKPTTIASASYDGTVRLWKPDGELIQEIKAHE--DRVLSVNFSPNGQIM 1087

Query: 172  ---DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                F+ ++     +   G    S   ++             ++ +++  FSP+ + +A 
Sbjct: 1088 ATASFDKKVKLWKANGQGGFEDFSYQTIE-----------GHNEGVYDVSFSPDGKIIAT 1136

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            A+ D      V L D   D      G+ +S+  +  FS +GK    +  +D  + ++  +
Sbjct: 1137 ASRDK----TVKLWDLEGDLLKTLTGHDKSVN-SVAFSPDGKMIA-TASRDNTVKLWQRN 1190

Query: 289  LQSNAT----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             +        + L     I  + S+SPD   I   + R+   +L+    +    K I   
Sbjct: 1191 DEGTFEILPDKTLQEHSDIVWAVSFSPDGETIA-TASRDKTVKLW--SLDDGSIKTI-NG 1246

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
             + S     +SP G +IA          + V   +  Q +  +  
Sbjct: 1247 HKDSVLSMSFSPNGKVIATASQDNT---VKVWNVENGQLQTTLTG 1288



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 89/218 (40%), Gaps = 22/218 (10%)

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + +    A+   +  +R++  D       + I      +L+  FS NG+    +   D+ 
Sbjct: 1040 DSKPTTIASASYDGTVRLWKPD---GELIQEIKAHEDRVLSVNFSPNGQIMA-TASFDKK 1095

Query: 282  MDIYSVDLQSN----ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            + ++  + Q      + + +          S+SPD   I   + R+   +L+     G  
Sbjct: 1096 VKLWKANGQGGFEDFSYQTIEGHNEGVYDVSFSPDGKIIA-TASRDKTVKLW--DLEGDL 1152

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE----RLLVEDSN-L 392
             K ++   + S     +SP G +IA          +     +G+ E    + L E S+ +
Sbjct: 1153 LKTLT-GHDKSVNSVAFSPDGKMIATASRDNTV-KLWQRNDEGTFEILPDKTLQEHSDIV 1210

Query: 393  QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             A ++SP G ++  + +   D   KL+S+D +G  +T+
Sbjct: 1211 WAVSFSPDGETIATASR---DKTVKLWSLD-DGSIKTI 1244



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 104/270 (38%), Gaps = 22/270 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            E++ +     ++ +   D  +I+ +   +D +L    FSPN + +A A+ D+     V +
Sbjct: 1220 ETIATASRDKTVKLWSLDDGSIKTINGHKDSVLSM-SFSPNGKVIATASQDN----TVKV 1274

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +    +    +    + +    F S  +  L+S   D ++ ++ +  +S   + L    
Sbjct: 1275 WNVENGQLQTTLTGHSNGVYDVNFLSENR--LVSASADHSLKVWQLGKRSFK-KNLNGHE 1331

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-----KRISQDKEAS--YFDPVW 354
             I    S+S +  +I   S  +G  +L+   S+ +       + +   +  +    D   
Sbjct: 1332 DIVWDVSFSFNGERIASAS-ADGTVKLWEKDSSTNGSHTPDYRLLKTLQGHNKEVLDVSL 1390

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            S  G LIA   +      + +   +G +  +L     +   + SP G ++  + +   D 
Sbjct: 1391 SQDGQLIATASYDTT---VQLWTGNGRRLWILKHPDQVFDVSISPDGETIATASR---DN 1444

Query: 415  GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              +L+  D   +   L +   +  D  +  
Sbjct: 1445 IVRLWRFDGEWQQTPLTDHRDWVRDVTFSP 1474



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 66/173 (38%), Gaps = 14/173 (8%)

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            S   D  + ++  D      + +       +S ++SP+   +   S  + K +L+     
Sbjct: 1048 SASYDGTVRLWKPD--GELIQEIKAHEDRVLSVNFSPNGQIMATASF-DKKVKLWKANGQ 1104

Query: 335  GSDQ---KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDS 390
            G  +    +  +      +D  +SP G +IA          + +   +G   + L   D 
Sbjct: 1105 GGFEDFSYQTIEGHNEGVYDVSFSPDGKIIATASRDKT---VKLWDLEGDLLKTLTGHDK 1161

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQW 442
            ++ +  +SP G+ +  + +   D   KL+  +  G  E L + T    SD  W
Sbjct: 1162 SVNSVAFSPDGKMIATASR---DNTVKLWQRNDEGTFEILPDKTLQEHSDIVW 1211


>gi|300867969|ref|ZP_07112608.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300333990|emb|CBN57786.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 1217

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 94/242 (38%), Gaps = 17/242 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            E++ S     ++ + + +   ++         ++   FSP+ + +A  + D      + L
Sbjct: 945  ETLASAGEDKTIWLWEVNTGRVKTPLLGHTGCVWSVAFSPDGRILASGSSDR----TIRL 1000

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
             D    R  K + +  S +L+  F  NGK    S   D+ + ++  D+ +    + L   
Sbjct: 1001 WDINTSRTLKILSDHESWVLSVTFDPNGKFLA-SSSADQTIRLW--DINTGECLKTLFGH 1057

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              +  S ++  D   +   S+      + V      + ++  +  ++  +    SP G L
Sbjct: 1058 QGLIWSVTFDRDGKTLASASE---DTTIKVWDIETGECQQTLEGHKSLVWSIASSPDGKL 1114

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +A T  + +   I      G   ++L    SNL +  ++ + ++L        D   K++
Sbjct: 1115 LASTS-ADQTVRIW-DSLTGQCVKVLESHGSNLWSVAFAKNSKTLA---SGSNDETVKVW 1169

Query: 420  SI 421
             +
Sbjct: 1170 DV 1171



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 86/251 (34%), Gaps = 18/251 (7%)

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G    ++ + D +            + +    FSPN + +A A  D      ++L +   
Sbjct: 908  GGASGTVTLWDIETHQCLKTLHRHQKSVRSVAFSPNGETLASAGEDK----TIWLWEVNT 963

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             R    +      + +  FS +G R L S   D  + ++ ++  S   + L++     +S
Sbjct: 964  GRVKTPLLGHTGCVWSVAFSPDG-RILASGSSDRTIRLWDIN-TSRTLKILSDHESWVLS 1021

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             ++ P+     F +     + + +   N  +  +     +   +   +   G  +A    
Sbjct: 1022 VTFDPNGK---FLASSSADQTIRLWDINTGECLKTLFGHQGLIWSVTFDRDGKTLASASE 1078

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  I V   +  + +  +E       +   SP G+ L        D   +++   L 
Sbjct: 1079 DTT---IKVWDIETGECQQTLEGHKSLVWSIASSPDGKLLA---STSADQTVRIWD-SLT 1131

Query: 425  GRNETLINTPA 435
            G+   ++ +  
Sbjct: 1132 GQCVKVLESHG 1142



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 96/291 (32%), Gaps = 42/291 (14%)

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
           K        E RLW V+D K +            R + HT +  ++       G      
Sbjct: 602 KIATGHADGEVRLWQVEDGKLLF-----------RSLGHTGA--VWSLSFSPDG------ 642

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
               E++ SG    ++ +       +R         ++   F+P+ Q +A  + D     
Sbjct: 643 ----ETLASGSFDWTIRLWALPNGELRQTLQGHGDWVWAIAFNPDGQLLASCSSDR---- 694

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + L D       K +      I A  F+ +GK    +   D  + I+ VD  +    ++
Sbjct: 695 TIKLWDIN-GNCIKTLEGHTDSINAIAFNPDGKTFA-TGSNDRTIRIWRVD--TFECHQI 750

Query: 298 TNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                  ISA ++SPD   +         + + +      + +    +     +  V+SP
Sbjct: 751 LQGSDSQISAIAFSPDGDILATC----DTQTIKLWDVKTGECRHTIANNLTFVWSIVFSP 806

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
            G         G+   I     +  +    +    S + +  +S  G+ + 
Sbjct: 807 DGQTFI----GGDGKVIKFWHIETGECWQTLSGFSSQVWSVAFSTDGQIIA 853



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/304 (13%), Positives = 99/304 (32%), Gaps = 58/304 (19%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA------------ 229
            ++  +G    ++ +   D      +    D  +    FSP+   +A              
Sbjct: 726  KTFATGSNDRTIRIWRVDTFECHQILQGSDSQISAIAFSPDGDILATCDTQTIKLWDVKT 785

Query: 230  ------------------------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                                    T+   D   +           + +  F S + +  F
Sbjct: 786  GECRHTIANNLTFVWSIVFSPDGQTFIGGDGKVIKFWHIETGECWQTLSGFSSQVWSVAF 845

Query: 266  SSNGKRALIS----------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            S++G+    S           +KD+  + +++   +N+    +  +  N++    P++S 
Sbjct: 846  STDGQIIAASDKQSLRLWQVGEKDDVAEFHTIQSYTNSV--WSVAISQNLAPGAIPNASL 903

Query: 316  IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             +      G   L+          +     + S     +SP G+ +A    +GE   I +
Sbjct: 904  AIACGGASGTVTLW--DIETHQCLKTLHRHQKSVRSVAFSPNGETLA---SAGEDKTIWL 958

Query: 376  MKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             + +  + +  LL     + +  +SP GR L        D   +L+ I+ +   + L + 
Sbjct: 959  WEVNTGRVKTPLLGHTGCVWSVAFSPDGRILA---SGSSDRTIRLWDINTSRTLKILSDH 1015

Query: 434  PAYA 437
             ++ 
Sbjct: 1016 ESWV 1019



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 80/227 (35%), Gaps = 26/227 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQI-----------LFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++      G N+R +   +  +           ++   FSP+  K+A    D E    V 
Sbjct: 558 TIWQAYLQGVNLRRVNFEKANLGKSVFSETFANIYSVAFSPDGGKIATGHADGE----VR 613

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTN 299
           L      +   R       + +  FS +G+    S   D  + ++++   +    + L  
Sbjct: 614 LWQVEDGKLLFRSLGHTGAVWSLSFSPDGETLA-SGSFDWTIRLWALP--NGELRQTLQG 670

Query: 300 TLFINISASYSPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                 + +++PD   +    SDR     + +   NG+  K + +    S     ++P G
Sbjct: 671 HGDWVWAIAFNPDGQLLASCSSDRT----IKLWDINGNCIKTL-EGHTDSINAIAFNPDG 725

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              A T  +     I  +      + L   DS + A  +SP G  L 
Sbjct: 726 KTFA-TGSNDRTIRIWRVDTFECHQILQGSDSQISAIAFSPDGDILA 771



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 45/121 (37%), Gaps = 18/121 (14%)

Query: 328 LYVMQSNGSDQKRISQDK-----------EASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           ++     G + +R++ +K            A+ +   +SP G  IA     GE     V 
Sbjct: 559 IWQAYLQGVNLRRVNFEKANLGKSVFSETFANIYSVAFSPDGGKIATGHADGEVRLWQV- 617

Query: 377 KKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +DG    R L     + + ++SP G +L        D   +L+++  NG     +    
Sbjct: 618 -EDGKLLFRSLGHTGAVWSLSFSPDGETLA---SGSFDWTIRLWALP-NGELRQTLQGHG 672

Query: 436 Y 436
            
Sbjct: 673 D 673


>gi|326801909|ref|YP_004319728.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphingobacterium sp. 21]
 gi|326552673|gb|ADZ81058.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphingobacterium sp. 21]
          Length = 701

 Score = 89.7 bits (221), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 108/339 (31%), Gaps = 55/339 (16%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG---------------IIK 190
                 R++ + ++DD  Q ++G K   + R +   +    G                 K
Sbjct: 64  GPTFELRRLTNFLADD-GQELSGLKISNDGRWVVYVKGGDHGAFDESEPRNPSSLPIKPK 122

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             +  +  +G N   L          P  +PN ++V +     E   +++ +     +  
Sbjct: 123 VEVWSIPFEGGNPICLGEGD-----YPVIAPNSKEVLF-----EQDGQLWTVPINGGQEA 172

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           K +   R      +FS +G + +    +D+   I          + L      ++S  ++
Sbjct: 173 KPLFFARGKNGGAQFSPDGSKVVFVSDRDDHSLIGVFHDIKTPIQWLAPDFSRDLSPRWA 232

Query: 311 PDSSQIVFE--------SDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           PD + +VF         SD           ++    +     +I      S    V +  
Sbjct: 233 PDGTAVVFVRTAAIGGASDSLTVQKARPWTIWRCDLDDGRSTKI-WSSPHSLSGSVPTTD 291

Query: 358 G---------DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFS 407
           G         + I F  +      +  +   G +  LL   + + +    S   + L+FS
Sbjct: 292 GGFNLHWADKERIVFLSYHDGWPHLYSISSAGGEASLLTPGNFMVEHVHLSADRKWLLFS 351

Query: 408 RKKDGDTG----SKLYSIDLN-GRNETLINTPAYASDPQ 441
                +        LY + ++  + E L       + PQ
Sbjct: 352 ANTGENNDDIDRRHLYRVSVSHSQMEALTKGTGIEAFPQ 390



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 70/237 (29%), Gaps = 71/237 (29%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESD--- 321
           G +  +++ +    +I+  +  +    RLTN L  +         S D   +V+      
Sbjct: 44  GSKIGLAINEQGKRNIWVAEGPTFELRRLTNFLADDGQELSGLKISNDGRWVVYVKGGDH 103

Query: 322 ---------------------------REGKE------------------------QLYV 330
                                        G                          QL+ 
Sbjct: 104 GAFDESEPRNPSSLPIKPKVEVWSIPFEGGNPICLGEGDYPVIAPNSKEVLFEQDGQLWT 163

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED- 389
           +  NG  + +             +SP G  + F     +   IGV     +  + L  D 
Sbjct: 164 VPINGGQEAKPLFFARGKNGGAQFSPDGSKVVFVSDRDDHSLIGVFHDIKTPIQWLAPDF 223

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSK-----------LYSIDL-NGRNETLINTP 434
           S   +P W+P G +++F R       S            ++  DL +GR+  + ++P
Sbjct: 224 SRDLSPRWAPDGTAVVFVRTAAIGGASDSLTVQKARPWTIWRCDLDDGRSTKIWSSP 280



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 62/185 (33%), Gaps = 25/185 (13%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGI---------IKNSLCVMDRD-GANIRYLT 207
           ++ D  + ++       + ++FV  + + G             ++   D D G + +  +
Sbjct: 219 LAPDFSRDLSPRWAPDGTAVVFVRTAAIGGASDSLTVQKARPWTIWRCDLDDGRSTKIWS 278

Query: 208 PSRDQILFEPR-------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                    P           +++++ + +Y D       +     + +    GNF  M+
Sbjct: 279 SPHSLSGSVPTTDGGFNLHWADKERIVFLSYHDGWPHLYSISSAGGEASLLTPGNF--MV 336

Query: 261 LAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSS 314
                S++ K  L S    E  D      +Y V +  +  E LT    I      + D  
Sbjct: 337 EHVHLSADRKWLLFSANTGENNDDIDRRHLYRVSVSHSQMEALTKGTGIEAFPQLTGDGG 396

Query: 315 QIVFE 319
            +VF 
Sbjct: 397 HVVFV 401


>gi|145504572|ref|XP_001438253.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405424|emb|CAK70856.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1016

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 50/311 (16%), Positives = 96/311 (30%), Gaps = 44/311 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  ++   +KF +         H   D IY +     G     
Sbjct: 456 TTLASGSDDTSIRLWDVKAGQK--KEKFDN---------HQ--DAIYSACFSPDGTIL-- 500

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                    SG    ++ + D                +    FSPN   +A  + D+   
Sbjct: 501 --------ASGSKDKTIRLWDVKTGQSIAKLDGHSGDVRSVNFSPNGTTLASGSDDN--- 549

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D    +   ++      + +  FS +G          +   I   D+++   + 
Sbjct: 550 -SILLWDVMTGQQKAKLYGHSGYVRSVNFSPDGTTLA---SGSDDCSILLWDVKTEQLKA 605

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L        S  +SPD   +   SD      + + +     QK  ++          +S
Sbjct: 606 KLDGHSGTIRSICFSPDGITLASGSD---DNSIRLWEVLTGQQK--AELDGYDVNQICFS 660

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           P G ++    +      I +      Q+   L      + +  +SP G  L        D
Sbjct: 661 PDGGMLVSCSWDDS---IRLWDVKSGQQTAELYCHSQGIISVNFSPDGTRLA---SGSSD 714

Query: 414 TGSKLYSIDLN 424
           +  +L+ +  +
Sbjct: 715 SSIRLWDVRQD 725



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 81/261 (31%), Gaps = 13/261 (4%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           ++   + SG    S+ + D      +         +    FSP+   +A       D   
Sbjct: 285 YMVIKIASGSDDYSILLWDVKTGQQKAKLYGHSGYVRSVNFSPDGTTLA----SGSDDCS 340

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           + L D + ++   ++   +  I +  FS +G     S   D ++ ++ V L       L 
Sbjct: 341 IILWDVKTEQYKAKLDGHQGAIRSICFSPDGITLA-SGSDDNSIRLWKV-LTGQQKAELG 398

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +     S  +SPD + +    D      + +        K        +     +SP G
Sbjct: 399 CSSNYVNSICFSPDGNTLASGGD---DNSIRLWNVKTGQIKAKFDGHSDAIRSICFSPDG 455

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +A +        +  +K    +E+       + +  +SP G  L        D   +L
Sbjct: 456 TTLA-SGSDDTSIRLWDVKAGQKKEKFDNHQDAIYSACFSPDGTILA---SGSKDKTIRL 511

Query: 419 YSIDLNGRNETLINTPAYASD 439
           + +        L         
Sbjct: 512 WDVKTGQSIAKLDGHSGDVRS 532



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 104/325 (32%), Gaps = 38/325 (11%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           VIK           LWDVK  +Q             +   H  S  +        G    
Sbjct: 287 VIKIASGSDDYSILLWDVKTGQQ-----------KAKLYGH--SGYVRSVNFSPDG---- 329

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                  ++ SG    S+ + D      +         +    FSP+   +A  + D+  
Sbjct: 330 ------TTLASGSDDCSIILWDVKTEQYKAKLDGHQGAIRSICFSPDGITLASGSDDN-- 381

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              + L      +    +G   + + +  FS +G          +   I   ++++   +
Sbjct: 382 --SIRLWKVLTGQQKAELGCSSNYVNSICFSPDGNTLA---SGGDDNSIRLWNVKTGQIK 436

Query: 296 -RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +         S  +SPD + +   SD      + +       +K    + + + +   +
Sbjct: 437 AKFDGHSDAIRSICFSPDGTTLASGSD---DTSIRLWDVKAGQKKEKFDNHQDAIYSACF 493

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           SP G ++A +    +   +  +K   S  +L     ++++  +SP+G +L        D 
Sbjct: 494 SPDGTILA-SGSKDKTIRLWDVKTGQSIAKLDGHSGDVRSVNFSPNGTTLASGSD---DN 549

Query: 415 GSKLYSIDLNGRNETLINTPAYASD 439
              L+ +    +   L     Y   
Sbjct: 550 SILLWDVMTGQQKAKLYGHSGYVRS 574



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 78/251 (31%), Gaps = 44/251 (17%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N           + E  FSP+   +A  ++DD     +   D R  +    I   +  + 
Sbjct: 193 NELNKLNGHTANVNEVCFSPDGMSLASCSFDD----SIVFWDFRTGKMQSLI-RGKRKVE 247

Query: 262 APRFSSNGKRALISVQK----------------DEAMDIYSV--------------DLQS 291
           +  FS N      S +K                D   +   +              D+++
Sbjct: 248 SLCFSPN-NTLAFSSRKFVYLWNLKTGKQISKLDGHSNYMVIKIASGSDDYSILLWDVKT 306

Query: 292 NATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              + +L        S ++SPD + +   SD      + +        K      + +  
Sbjct: 307 GQQKAKLYGHSGYVRSVNFSPDGTTLASGSD---DCSIILWDVKTEQYKAKLDGHQGAIR 363

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              +SP G  +A +        +  +     +  L    + + +  +SP G +L      
Sbjct: 364 SICFSPDGITLA-SGSDDNSIRLWKVLTGQQKAELGCSSNYVNSICFSPDGNTLA---SG 419

Query: 411 DGDTGSKLYSI 421
             D   +L+++
Sbjct: 420 GDDNSIRLWNV 430


>gi|281410813|gb|ADA68819.1| HET-D [Podospora anserina]
          Length = 504

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 96/283 (33%), Gaps = 21/283 (7%)

Query: 170 KGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G   + + F  +S  V SG    ++ + +    +           ++   FSP+ + VA
Sbjct: 172 HGGSVNSVAFSPDSKWVASGSTDRTIKIWEAATGSCTQTLEGHGGWVYSVAFSPDSKWVA 231

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D      + + +       + +      + +  FS + K    S   D  + I+  
Sbjct: 232 SGSADS----TIKIWEAATGSCTQTLEGHGGPVNSVAFSPDSKWVA-SGSDDHTIKIWEA 286

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
               + T+ L        S ++SPDS  +   SD      + + ++      +  +    
Sbjct: 287 -ATGSCTQTLEGHGGPVNSVTFSPDSKWVASGSD---DHTIKIWEAATGSCTQTLEGHGG 342

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
             +   +SP    +A +  +     I         + L     ++ +  +SP  + +   
Sbjct: 343 WVYSVAFSPDSKWVA-SGSADSTIKIWEAATGSCTQTLEGHGGSVNSVAFSPDSKWVASG 401

Query: 408 RKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
                D   K++        +TL      +N+  ++ D +WV 
Sbjct: 402 SD---DHTIKIWEAATGSCTQTLEGHGGPVNSVTFSPDSKWVA 441



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 92/267 (34%), Gaps = 19/267 (7%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG   +++ + +    +           +    FSP+ + VA  + D      + + +
Sbjct: 20  VASGSDDHTIKIWEAATGSCTQTLEGHGGWVLSVAFSPDSKWVASGSADS----TIKIWE 75

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  + +      +L+  FS + K  ++S   D  + I+      + T+ L      
Sbjct: 76  AATGSCTQTLEGHGGWVLSVAFSPDSKW-VVSGSADSTIKIWEA-ATGSCTQTLEGYGGW 133

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               ++SPDS  +   S       + + ++      +  +    S     +SP    +A 
Sbjct: 134 VWLVAFSPDSKWVASGS---ADSTIKIWEAATGSCTQTLEGHGGSVNSVAFSPDSKWVA- 189

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +  +     I         + L      + +  +SP  + +        D+  K++    
Sbjct: 190 SGSTDRTIKIWEAATGSCTQTLEGHGGWVYSVAFSPDSKWVA---SGSADSTIKIWEAAT 246

Query: 424 NGRNETL------INTPAYASDPQWVG 444
               +TL      +N+ A++ D +WV 
Sbjct: 247 GSCTQTLEGHGGPVNSVAFSPDSKWVA 273



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 14/224 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG   +++ + +    +           +    FSP+ + VA  + D      + + +
Sbjct: 272 VASGSDDHTIKIWEAATGSCTQTLEGHGGPVNSVTFSPDSKWVASGSDDH----TIKIWE 327

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  + +      + +  FS + K    S   D  + I+      + T+ L      
Sbjct: 328 AATGSCTQTLEGHGGWVYSVAFSPDSKWVA-SGSADSTIKIWEA-ATGSCTQTLEGHGGS 385

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SPDS  +   SD      + + ++      +  +          +SP    +A 
Sbjct: 386 VNSVAFSPDSKWVASGSD---DHTIKIWEAATGSCTQTLEGHGGPVNSVTFSPDSKWVA- 441

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
                +   I + +         +E     + +  +SP  + + 
Sbjct: 442 --SGSDDHTIKIWEAATGSCTQTLEGHGGWVYSVAFSPDSKWVA 483



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 83/244 (34%), Gaps = 19/244 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ + VA  + D      + + +       + +      +L+  FS
Sbjct: 1   LEGHSGSVNSVAFSPDSKWVASGSDDH----TIKIWEAATGSCTQTLEGHGGWVLSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            + K    S   D  + I+      + T+ L       +S ++SPDS  +V  S      
Sbjct: 57  PDSKWVA-SGSADSTIKIWEA-ATGSCTQTLEGHGGWVLSVAFSPDSKWVVSGS---ADS 111

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + + ++      +  +      +   +SP    +A +  +     I         + L 
Sbjct: 112 TIKIWEAATGSCTQTLEGYGGWVWLVAFSPDSKWVA-SGSADSTIKIWEAATGSCTQTLE 170

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDP 440
               ++ +  +SP  + +        D   K++        +TL      + + A++ D 
Sbjct: 171 GHGGSVNSVAFSPDSKWVASGST---DRTIKIWEAATGSCTQTLEGHGGWVYSVAFSPDS 227

Query: 441 QWVG 444
           +WV 
Sbjct: 228 KWVA 231


>gi|313125049|ref|YP_004035313.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Halogeometricum
           borinquense DSM 11551]
 gi|312291414|gb|ADQ65874.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Halogeometricum
           borinquense DSM 11551]
          Length = 719

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 79/199 (39%), Gaps = 22/199 (11%)

Query: 216 EPRFSPNQQKVAYATYDDED----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +P+ SP+  +VA+   + +D       +Y++    D  P+R+     +   PR+S +G R
Sbjct: 17  DPQVSPDGTRVAFVRKEPKDDESYEQTIYVVPAAGDSDPRRLTIAEGVDSQPRWSPSGDR 76

Query: 272 ALISVQK---DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                 +   D+   ++ + +     E++T+         +SPD ++I F+      E+ 
Sbjct: 77  LAFVSTRGADDDRPQLWVLPMDGGEAEQVTDVPGGVSGIEWSPDGTRIAFQQATTETERE 136

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQER 384
             +     D++    ++EAS    +     D + + +      G    + +   D   +R
Sbjct: 137 DGIDLGIGDEE---YEREASDPRVI-----DRLIYRQQTQYRDGTVAHVYLAHVDRDDDR 188

Query: 385 L--LVEDSNLQ-APTWSPS 400
           +  + +      AP W   
Sbjct: 189 VERVTDGELDHVAPAWRDD 207



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/345 (13%), Positives = 112/345 (32%), Gaps = 67/345 (19%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSG-IIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           DI Q    +     +R+ FV +        + ++ V+   G +        + +  +PR+
Sbjct: 11  DIVQVEDPQVSPDGTRVAFVRKEPKDDESYEQTIYVVPAAGDSDPRRLTIAEGVDSQPRW 70

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALIS--- 275
           SP+  ++A+ +    D  R  L    +D    +++ +    +    +S +G R       
Sbjct: 71  SPSGDRLAFVSTRGADDDRPQLWVLPMDGGEAEQVTDVPGGVSGIEWSPDGTRIAFQQAT 130

Query: 276 --VQKDEAMDIYS--------------------------------------VDLQSNATE 295
              ++++ +D+                                        VD   +  E
Sbjct: 131 TETEREDGIDLGIGDEEYEREASDPRVIDRLIYRQQTQYRDGTVAHVYLAHVDRDDDRVE 190

Query: 296 RLTNTLFINISASYSPDSSQIVFES---------DREGKEQLYVMQSNGSDQKRISQDKE 346
           R+T+    +++ ++  D   + F           D      +  ++    D   ++Q   
Sbjct: 191 RVTDGELDHVAPAW-RDDDTLYFGVKFPQGEVEPDDSPVIDIQSVELPSGDVTDVTQTTC 249

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVMKKDGSQERLLVEDSNLQAP-----T 396
                 V S  G  +A+ +   E+       I V   +  +  +  E  +         +
Sbjct: 250 WGLVMDVAS-DGR-VAYVRTPEERMSMRSSDIEVYDPETERAVVPTETLDRTVDLAAGLS 307

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           W P    + F     G   ++  S D+  R+     T +  ++P+
Sbjct: 308 WGPDEEDVYFLTPDGGHYVTRRVSADVEERSSADRETQSDDAEPE 352



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 9/103 (8%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDG-SQERLLV-EDSNLQAPTWSPSGRS 403
           DP  SP G  +AF +   +        I V+   G S  R L   +     P WSPSG  
Sbjct: 17  DPQVSPDGTRVAFVRKEPKDDESYEQTIYVVPAAGDSDPRRLTIAEGVDSQPRWSPSGDR 76

Query: 404 LIFSRKKDGDTG-SKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
           L F   +  D    +L+ + ++G   E + + P   S  +W  
Sbjct: 77  LAFVSTRGADDDRPQLWVLPMDGGEAEQVTDVPGGVSGIEWSP 119



 Score = 40.8 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 5/59 (8%)

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNG--RNETLINTPAYASDPQWVG 444
            ++ P  SP G  + F RK+  D  S    +Y +   G      L       S P+W  
Sbjct: 14  QVEDPQVSPDGTRVAFVRKEPKDDESYEQTIYVVPAAGDSDPRRLTIAEGVDSQPRWSP 72


>gi|160877356|ref|YP_001556672.1| peptidase S9 prolyl oligopeptidase [Shewanella baltica OS195]
 gi|160862878|gb|ABX51412.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella baltica OS195]
          Length = 698

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 54/327 (16%), Positives = 111/327 (33%), Gaps = 66/327 (20%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I+           K S  +   DG + R +T  +   + EP FSP+ + +A+ +  +ED
Sbjct: 73  HIIAPVTEYDLKADKGSTQLWRFDGKHNRAITA-KGLRVSEPVFSPDGKFLAFVSQRNED 131

Query: 236 -ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-------------------- 274
              ++YL+        +R+ +  + + + ++   GK                        
Sbjct: 132 EASQIYLLPMDGPGEAQRLTDIPTGVNSIKW--VGKHLYFISNIFPNQSWEEMKTQLTTD 189

Query: 275 --------------------SVQKDEAMDIYSVDLQSNATERLTNTLF------INISAS 308
                                + +     ++ +  +    E +T             SAS
Sbjct: 190 TDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHELPRSDQSSAS 249

Query: 309 Y--SPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           Y  SP+   I F       +      +++    G+  + ++ D +A   +P +SP G  +
Sbjct: 250 YDVSPNERWIAFNVYGSENKVDPKIDIFLATIGGNKAENLTADNQAPDLNPSFSPNGKTL 309

Query: 362 AFTKFSGEKF-----AIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDT 414
           AFT+     F      + ++  D  +   L  D +  +   +W+P  +   F    +   
Sbjct: 310 AFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTPDNKG--FYATVEDAA 367

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQ 441
            +++YSID        I      S P 
Sbjct: 368 TNRIYSIDAKNGKVKAITEATDFSQPA 394



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 98/295 (33%), Gaps = 72/295 (24%)

Query: 217 PRFSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  SP  + +      Y    D+   +++  D    +  + I      +  P FS +GK 
Sbjct: 65  PIVSPTGEHIIAPVTEYDLKADKGSTQLWRFD---GKHNRAITAKGLRVSEPVFSPDGKF 121

Query: 272 ALISVQK--DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-------- 320
                Q+  DEA  IY + +      +RLT+      S  +      + F S        
Sbjct: 122 LAFVSQRNEDEASQIYLLPMDGPGEAQRLTDIPTGVNSIKWV--GKHLYFISNIFPNQSW 179

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQ----- 343
                                           D   +  ++ + + G + + I+Q     
Sbjct: 180 EEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHE 239

Query: 344 --DKEASYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLVEDSN--LQA 394
               + S      SP    IAF  +  E        I +    G++   L  D+      
Sbjct: 240 LPRSDQSSASYDVSPNERWIAFNVYGSENKVDPKIDIFLATIGGNKAENLTADNQAPDLN 299

Query: 395 PTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
           P++SP+G++L F+R+K        S+L  +D++ R  T + +      S   W  
Sbjct: 300 PSFSPNGKTLAFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTP 354



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 85/267 (31%), Gaps = 17/267 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            + F+S    +   +     +  D  N             +     ++++ A+       
Sbjct: 166 HLYFISNIFPNQSWEEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAK 225

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-----QKDEAMDIYSVDLQ 290
              V  +         R         +   S N +    +V     + D  +DI+   + 
Sbjct: 226 GGNVENITQPAGHELPR---SDQSSASYDVSPNERWIAFNVYGSENKVDPKIDIFLATIG 282

Query: 291 SNATERLT-NTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKRISQD 344
            N  E LT +    +++ S+SP+   + F   +         +L ++  +      ++ D
Sbjct: 283 GNKAENLTADNQAPDLNPSFSPNGKTLAFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSD 342

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S     W+P       T        I  +     + + + E ++   P     G  +
Sbjct: 343 WDRSVSQFSWTPDNKGFYATVEDAATNRIYSIDAKNGKVKAITEATDFSQPAIGKDGELI 402

Query: 405 IFSRKKDGDTGSKLYSID-LNGRNETL 430
                +     ++L SI+  NG+ E L
Sbjct: 403 A--TNQSFLYPARLVSINPRNGKIERL 427



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 68/248 (27%), Gaps = 68/248 (27%)

Query: 260 ILAPRFSSNGKRAL-----ISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +P  S  G+  +       ++ D  +  ++  D        +T          +SPD 
Sbjct: 62  IGSPIVSPTGEHIIAPVTEYDLKADKGSTQLWRFD--GKHNRAITAKGLRVSEPVFSPDG 119

Query: 314 SQIVFESDR--EGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
             + F S R  +   Q+Y++  +G  + +R++ D         W   G  + F       
Sbjct: 120 KFLAFVSQRNEDEASQIYLLPMDGPGEAQRLT-DIPTGVNSIKWV--GKHLYFISNIFPN 176

Query: 367 ------------------------------------SGEKFAIGVMKKDGSQERLLVEDS 390
                                                  +  +  +   G     + + +
Sbjct: 177 QSWEEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPA 236

Query: 391 NLQAPT---------WSPSGRSLIF---SRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             + P           SP+ R + F     +   D    ++   + G     +     A 
Sbjct: 237 GHELPRSDQSSASYDVSPNERWIAFNVYGSENKVDPKIDIFLATIGGNKAENLTADNQAP 296

Query: 439 D--PQWVG 444
           D  P +  
Sbjct: 297 DLNPSFSP 304


>gi|332706634|ref|ZP_08426695.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332354518|gb|EGJ33997.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1453

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 98/266 (36%), Gaps = 30/266 (11%)

Query: 159  SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            SD +   +    G           ++ +    N++ + +R+G  ++ LT   + +     
Sbjct: 1187 SDWVNSVVFSPDG----------MTIATASDDNTVKLWNREGKPLQTLTGHSNWVNSV-V 1235

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+   +A A+ D+     V L + +  +    +      + +  FS +G     S   
Sbjct: 1236 FSPDGMTIATASDDN----TVKLWNLK-GKHLHTLTGHSEPVNSVAFSRDGMTIA-SASW 1289

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D  + ++  +L+      LT       S ++SPD   I   S     + + +    G   
Sbjct: 1290 DNTVKLW--NLKGKHLHTLTEHNANVTSVAFSPDGMTIATAS---WDKTVKLWNHQGKHL 1344

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTW 397
              ++   +    + V+S  G  +A   +      + +    G     L   S+   +  +
Sbjct: 1345 HTLTGHSDW-VNNVVFSRDGQTLASASWDKT---VKLWNHQGKDLHTLTGHSDWVNSVVF 1400

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSIDL 423
            SP G++L        D    L+++DL
Sbjct: 1401 SPDGQTLA---SASADNTVILWNLDL 1423



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 98/267 (36%), Gaps = 27/267 (10%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++ S    N++ + +  G ++  LT   D +     FSP+   +A A+ D      V L
Sbjct: 831  MTIASASWDNTVKLWNLQGKHLHTLTGHTDTVTSV-TFSPDGMTIASASLDK----TVKL 885

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             + +        G+   +     FS +G     S   D  + ++  +L+      LT   
Sbjct: 886  WNLQGKHLHTLTGHSEPVNSL-VFSPDGMTIA-SASFDNTVKLW--NLKGKPLHTLTGHS 941

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S ++S D   I   S     + + +    G     ++   E       + P G  I
Sbjct: 942  EPVTSVAFSRDGMTIATAS---WDKTVKLWNLKGKPLHTLTGHSE-PVTSVAFGPDGQTI 997

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A   +      + +    G     L    +++ +  +SP G ++  +     D   KL++
Sbjct: 998  ASASWDNT---VKLWNLKGKHLHTLTGHSADVTSLAFSPDGMTIATASL---DNTVKLWN 1051

Query: 421  I------DLNGRNETLINTPAYASDPQ 441
            +       L G ++ LI T A++ D Q
Sbjct: 1052 LQGKVLQTLTGHSQYLI-TVAFSPDGQ 1077



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 89/253 (35%), Gaps = 22/253 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++ S    N++ + +  G  +  LT   + +     FS +   +A A++D      V L
Sbjct: 913  MTIASASFDNTVKLWNLKGKPLHTLTGHSEPVTSV-AFSRDGMTIATASWDK----TVKL 967

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             + +  +    +      + +  F  +G+    S   D  + ++  +L+      LT   
Sbjct: 968  WNLK-GKPLHTLTGHSEPVTSVAFGPDGQTIA-SASWDNTVKLW--NLKGKHLHTLTGHS 1023

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S ++SPD   I   S       + +    G   + ++           +SP G  I
Sbjct: 1024 ADVTSLAFSPDGMTIATASL---DNTVKLWNLQGKVLQTLT-GHSQYLITVAFSPDGQTI 1079

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A          + +    G     L   S  + +  +S  G ++  +     D   KL+ 
Sbjct: 1080 ASASDDNT---VKLWNLKGKPLHTLTGHSEPVTSVAFSRDGMTIASASL---DNTVKLW- 1132

Query: 421  IDLNGRNETLINT 433
             +L G++  ++  
Sbjct: 1133 -NLKGKDLHILTG 1144



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/286 (16%), Positives = 102/286 (35%), Gaps = 24/286 (8%)

Query: 162  IYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            + Q++TG      +       +++ S    N++ + +  G  +  LT   + +     FS
Sbjct: 1056 VLQTLTGHSQYLITVAFSPDGQTIASASDDNTVKLWNLKGKPLHTLTGHSEPVTSV-AFS 1114

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
             +   +A A+ D+     V L + +  +    +    + + +  FS + +    +   D+
Sbjct: 1115 RDGMTIASASLDN----TVKLWNLK-GKDLHILTGHSADVTSVAFSRDDQTIA-TASWDK 1168

Query: 281  AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             + ++  + Q      LT       S  +SPD   I   SD      + +    G   + 
Sbjct: 1169 TVKLW--NHQGKHLHTLTGHSDWVNSVVFSPDGMTIATASD---DNTVKLWNREGKPLQT 1223

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSP 399
            ++          V+SP G  IA          + +    G     L   S  + +  +S 
Sbjct: 1224 LTGHSNW-VNSVVFSPDGMTIATASDDNT---VKLWNLKGKHLHTLTGHSEPVNSVAFSR 1279

Query: 400  SGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
             G ++  +     D   KL+  +L G++  TL    A  +   +  
Sbjct: 1280 DGMTIASASW---DNTVKLW--NLKGKHLHTLTEHNANVTSVAFSP 1320



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 83/247 (33%), Gaps = 22/247 (8%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G N           +    FS +   +A A++D+     V L + +  +    +      
Sbjct: 807  GVNQYNSLDKHTDTVTSVAFSRDGMTIASASWDN----TVKLWNLQ-GKHLHTLTGHTDT 861

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + +  FS +G     S   D+ + ++  +LQ      LT       S  +SPD   I   
Sbjct: 862  VTSVTFSPDGMTIA-SASLDKTVKLW--NLQGKHLHTLTGHSEPVNSLVFSPDGMTIASA 918

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            S       + +    G     ++   E       +S  G  IA   +      + +    
Sbjct: 919  SF---DNTVKLWNLKGKPLHTLTGHSE-PVTSVAFSRDGMTIATASWDKT---VKLWNLK 971

Query: 380  GSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYA 437
            G     L   S  + +  + P G+++  +     D   KL+  +L G++  TL    A  
Sbjct: 972  GKPLHTLTGHSEPVTSVAFGPDGQTIASASW---DNTVKLW--NLKGKHLHTLTGHSADV 1026

Query: 438  SDPQWVG 444
            +   +  
Sbjct: 1027 TSLAFSP 1033


>gi|332664564|ref|YP_004447352.1| WD40-like beta Propeller containing protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332333378|gb|AEE50479.1| WD40-like beta Propeller containing protein [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 1022

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 104/288 (36%), Gaps = 45/288 (15%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  Y   T E+  F++ I     +  +G I  ++    R G          D +     +
Sbjct: 303 DGKYVLFTSERNLFSTDIFLADAT--NGQIMKTVASTARSGN-----VDFFDFLESSGAW 355

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQK 278
           SP+ ++VA   +     + + +      +    +        + P +S +GK  ++S  K
Sbjct: 356 SPDSKRVAVVGFKRGRNV-LLIKSPFTGKTLDELAPADLQAFSNPTWSPDGKTIVVSGLK 414

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   D+Y+ ++++   ++LT+  +  I ++++ D   + F +D+           NG   
Sbjct: 415 EGHTDLYAYNIRTRTLKQLTDDKYSEIQSTWAEDGQTLFFSTDQ-------KAWENGRTY 467

Query: 339 KRISQD--------KEASYFDPVWSPQGD----------LIAFTKFSGEKFAIGVMKKDG 380
            R++ +         E +++D V+ P  D           I F         +     D 
Sbjct: 468 GRLTFNLASIDIVSGEVTHYDEVF-PGADNLNPQLDTAGNIIFMSNRDGYRNLYRYNLDT 526

Query: 381 SQERLLVE------DSNLQAPTWSPSGR--SLIFSRKKDGDTGSKLYS 420
            +   L +        +  +P  S   +   ++++       G  +Y 
Sbjct: 527 KELTQLTDLAVGISGISHYSPAISVDRKRDRVLYTLY--NKKGYSIYR 572



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 71/190 (37%), Gaps = 21/190 (11%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERL---TNTLFI------- 303
           +   M ++P  S +GK  L + +++  + DI+  D  +    +    T            
Sbjct: 290 DGGQMNISPSISPDGKYVLFTSERNLFSTDIFLADATNGQIMKTVASTARSGNVDFFDFL 349

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             S ++SPDS ++     + G+  L +     G     ++     ++ +P WSP G  I 
Sbjct: 350 ESSGAWSPDSKRVAVVGFKRGRNVLLIKSPFTGKTLDELAPADLQAFSNPTWSPDGKTIV 409

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKD--------GD 413
            +        +          + L +D   +  + W+  G++L FS  +         G 
Sbjct: 410 VSGLKEGHTDLYAYNIRTRTLKQLTDDKYSEIQSTWAEDGQTLFFSTDQKAWENGRTYGR 469

Query: 414 TGSKLYSIDL 423
               L SID+
Sbjct: 470 LTFNLASIDI 479



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 84/248 (33%), Gaps = 28/248 (11%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---------FRSM 259
              Q+   P  SP+ + V + +  +     ++L D    +  K + +         F  +
Sbjct: 290 DGGQMNISPSISPDGKYVLFTSERNLFSTDIFLADATNGQIMKTVASTARSGNVDFFDFL 349

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIV 317
             +  +S + KR  +   K     +      +  T  E     L    + ++SPD   IV
Sbjct: 350 ESSGAWSPDSKRVAVVGFKRGRNVLLIKSPFTGKTLDELAPADLQAFSNPTWSPDGKTIV 409

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-------- 369
               +EG   LY         K+++ DK  S     W+  G  + F+             
Sbjct: 410 VSGLKEGHTDLYAYNIRTRTLKQLTDDK-YSEIQSTWAEDGQTLFFSTDQKAWENGRTYG 468

Query: 370 --KFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              F +  +     +      +   ++   P    +G  +IF   +DG     LY  +L+
Sbjct: 469 RLTFNLASIDIVSGEVTHYDEVFPGADNLNPQLDTAGN-IIFMSNRDGYR--NLYRYNLD 525

Query: 425 GRNETLIN 432
            +  T + 
Sbjct: 526 TKELTQLT 533



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 58/152 (38%), Gaps = 15/152 (9%)

Query: 299 NTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSD--QKRISQDKEASY------ 349
           +   +NIS S SPD   ++F S+R      +++  +      +   S  +  +       
Sbjct: 290 DGGQMNISPSISPDGKYVLFTSERNLFSTDIFLADATNGQIMKTVASTARSGNVDFFDFL 349

Query: 350 -FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSLI 405
                WSP    +A   F   +  + +          E    +      PTWSP G++++
Sbjct: 350 ESSGAWSPDSKRVAVVGFKRGRNVLLIKSPFTGKTLDELAPADLQAFSNPTWSPDGKTIV 409

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            S  K+G T   LY+ ++  R    +    Y+
Sbjct: 410 VSGLKEGHT--DLYAYNIRTRTLKQLTDDKYS 439


>gi|332711659|ref|ZP_08431590.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332349637|gb|EGJ29246.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 959

 Score = 89.7 bits (221), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 103/252 (40%), Gaps = 22/252 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E + +  + N+  + D+ G  +  L   +D++     FSP+ Q++A A+ D        +
Sbjct: 656 ERLATASLDNTARIWDKKGNQLAVLKLHQDRVSSL-AFSPDGQRLATASRDG----TAII 710

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D + ++    +   + ++ +  FS +G+R   +  +D    I+  D + N    L    
Sbjct: 711 WDNKGNQLA-LLTGHQGLVSSLAFSPDGQRLA-TASRDGTAIIW--DNKGNQLALLKGHQ 766

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++SPD  ++   +  +    ++ +Q N   +  + +  E      V+SP G  +
Sbjct: 767 DEVSSLAFSPDGKKLA-TASLDKTAIIWDLQVN---EIAVLKGHEHKVSSLVFSPDGQRL 822

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           A            +  K G+Q  +L      L +  +SP G+ L  +     D  ++++ 
Sbjct: 823 ATASEDKTA---RIWDKKGNQLAVLKWHQDRLSSLAFSPDGQRLATASL---DNTARIW- 875

Query: 421 IDLNGRNETLIN 432
            DL G     + 
Sbjct: 876 -DLQGNQLARLT 886



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 55/324 (16%), Positives = 117/324 (36%), Gaps = 40/324 (12%)

Query: 88  KQKITNPDSIPRFQDWNSLGAQ-VLVTG---RVIKEGKDRLRVEFRLWDVKDRKQIIGKK 143
            Q++         + W++ G Q  L+TG    V      R           D +++    
Sbjct: 614 LQRLATASRDGTARIWDNKGNQLALLTGHQDEVTSVAFSR-----------DGERLATAS 662

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGA 201
             ++   W K  + ++      +  ++    S + F    + + +     +  + D  G 
Sbjct: 663 LDNTARIWDKKGNQLA---VLKLHQDR---VSSLAFSPDGQRLATASRDGTAIIWDNKG- 715

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N   L      ++    FSP+ Q++A A+ D        + D + ++    +   +  + 
Sbjct: 716 NQLALLTGHQGLVSSLAFSPDGQRLATASRDG----TAIIWDNKGNQLA-LLKGHQDEVS 770

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +  FS +GK+   +   D+   I+  DLQ N    L        S  +SPD  ++   S+
Sbjct: 771 SLAFSPDGKKLA-TASLDKTAIIW--DLQVNEIAVLKGHEHKVSSLVFSPDGQRLATASE 827

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               +   +    G+    +   ++       +SP G  +A            +    G+
Sbjct: 828 ---DKTARIWDKKGNQLAVLKWHQDR-LSSLAFSPDGQRLATASLDNTA---RIWDLQGN 880

Query: 382 QERLLVE-DSNLQAPTWSPSGRSL 404
           Q   L E +  + +  +SP G++L
Sbjct: 881 QLARLTEHEHKVYSLAFSPDGKTL 904



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 102/284 (35%), Gaps = 36/284 (12%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +  +  D   ++        S   +  L      G  +  L      +   P  SP   
Sbjct: 484 KLEQQGNDILRQLQDNVYYDTSTEREKLLYEAMETGQKLDNLVKDGRPLDHYPAISP--- 540

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
                       L          +    +   +  + +  FS +G++   +V  D    +
Sbjct: 541 ------------LYALQQSISKFQERAVVTGHQDKVTSVEFSPSGEKIA-TVSWDPTAKV 587

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  DLQ N   +L        S ++SPD  ++   + R+G  +++    N  +Q  +   
Sbjct: 588 W--DLQGNELAKLKGHQDEVTSVAFSPDLQRLA-TASRDGTARIW---DNKGNQLALLTG 641

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRS 403
            +       +S  G+ +A            +  K G+Q  +L +    + +  +SP G+ 
Sbjct: 642 HQDEVTSVAFSRDGERLATASLDNTA---RIWDKKGNQLAVLKLHQDRVSSLAFSPDGQR 698

Query: 404 LIFSRKKDG------DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           L  +  +DG      + G++L    L G ++ L+++ A++ D Q
Sbjct: 699 LA-TASRDGTAIIWDNKGNQLAL--LTG-HQGLVSSLAFSPDGQ 738



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 78/215 (36%), Gaps = 24/215 (11%)

Query: 192 SLCVMDRDG--------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            L    RDG         N   L       +    FSP+ +K+A A+ D        + D
Sbjct: 739 RLATASRDGTAIIWDNKGNQLALLKGHQDEVSSLAFSPDGKKLATASLDK----TAIIWD 794

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            +++      G+    + +  FS +G+R   +  +D+   I+  D + N    L      
Sbjct: 795 LQVNEIAVLKGHEHK-VSSLVFSPDGQRLA-TASEDKTARIW--DKKGNQLAVLKWHQDR 850

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SPD  ++   S         +    G+   R++ + E   +   +SP G  +  
Sbjct: 851 LSSLAFSPDGQRLATASL---DNTARIWDLQGNQLARLT-EHEHKVYSLAFSPDGKTLTT 906

Query: 364 TKFSGEKFAIGVMKKDGSQERL---LVEDSNLQAP 395
               G    I  ++  G        L+ED  ++ P
Sbjct: 907 ASLDGTVI-IWKVESLGDLLARGCELLEDYFVRHP 940


>gi|322433857|ref|YP_004216069.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX9]
 gi|321161584|gb|ADW67289.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX9]
          Length = 744

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 96/291 (32%), Gaps = 23/291 (7%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-------PRFSPN 222
               +SR      +  +     +  +   D  N      S    +         P  +  
Sbjct: 395 SWTSDSRYFVFQSTRGAASANATQNIWAVD--NQHRWLDSNPFQVTNGPLSYQGPATART 452

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              + +   +    L  + + T   +  ++  +        + S +G+      Q D ++
Sbjct: 453 GHTIFFLGLNARMSLLRFDLATHQFKPLRQDSSMMGHT---QVSYDGRWIAWINQSDGSL 509

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRI 341
                D   +   +LT+         +S D  Q+   + + G   ++ V+ + G   + +
Sbjct: 510 WRSRAD--GSERLQLTSAPTEVFRMHWSADDLQLAIMARQPGTPWKISVLSNAGGSSQPL 567

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAP 395
             D+     DP +SP G  + F +         +  +I ++     +   L   + L +P
Sbjct: 568 L-DERRDQADPSFSPDGRQVVFGRPPDLMGVERDPKSIAIVDLATHRVDPLPGSAGLFSP 626

Query: 396 TWSPSGRSL-IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
           +WSP G  +  F   + G       +             PA++ D +W+ F
Sbjct: 627 SWSPDGHYISAFPLDQSGIRLFDTRTHTWRNLITRSAADPAWSHDGKWIFF 677



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 52/318 (16%), Positives = 103/318 (32%), Gaps = 71/318 (22%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           +SL +   DG+N+R          F  R+SP+ + + +   D                 P
Sbjct: 320 SSLFLAADDGSNVR-KFADLSGRAFWLRWSPDGKLLRFTLLDPATHNTALWQIASDGTHP 378

Query: 251 KRIGNFRSMILAP------RFSSNGKRALI-----SVQKDEAMDIYSVDLQSN----ATE 295
           + +        AP       ++S+ +  +      +   +   +I++VD Q         
Sbjct: 379 QAV---FPANTAPTNECCGSWTSDSRYFVFQSTRGAASANATQNIWAVDNQHRWLDSNPF 435

Query: 296 RLTNTLFINISAS-------------------------------------------YSPD 312
           ++TN        +                                            S D
Sbjct: 436 QVTNGPLSYQGPATARTGHTIFFLGLNARMSLLRFDLATHQFKPLRQDSSMMGHTQVSYD 495

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSGEKF 371
              I + +  +G   L+  +++GS++ +++       F   WS     +A   +  G  +
Sbjct: 496 GRWIAWINQSDGS--LWRSRADGSERLQLTS-APTEVFRMHWSADDLQLAIMARQPGTPW 552

Query: 372 AIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGR 426
            I V+   G   + L+++   QA P++SP GR ++F R  D          +  +DL   
Sbjct: 553 KISVLSNAGGSSQPLLDERRDQADPSFSPDGRQVVFGRPPDLMGVERDPKSIAIVDLATH 612

Query: 427 NETLINTPAYASDPQWVG 444
               +   A    P W  
Sbjct: 613 RVDPLPGSAGLFSPSWSP 630



 Score = 83.5 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 82/227 (36%), Gaps = 23/227 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--------FSPNQQKVAYATY 231
           +  + VS   +    +   DG+  R      +++             +S +  ++A    
Sbjct: 487 MGHTQVSYDGRWIAWINQSDGSLWRSRADGSERLQLTSAPTEVFRMHWSADDLQLAIMAR 546

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD------EAMDIY 285
                 ++ ++ +    + + + + R     P FS +G++ +     D      +   I 
Sbjct: 547 QPGTPWKISVL-SNAGGSSQPLLDERRDQADPSFSPDGRQVVFGRPPDLMGVERDPKSIA 605

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQD 344
            VDL ++  + L  +  +  S S+SPD   I  F  D+ G   + +  +     + +   
Sbjct: 606 IVDLATHRVDPLPGSAGL-FSPSWSPDGHYISAFPLDQSG---IRLFDTRTHTWRNLIT- 660

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              S  DP WS  G  I F  F+     I  +  D  +   +   S+
Sbjct: 661 --RSAADPAWSHDGKWIFFHAFAEPGSPIYRVNVDSGELIRITGLSD 705



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 94/281 (33%), Gaps = 31/281 (11%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  + + G  + +L ++   G   R +    + +  +  + P+ + + +A          
Sbjct: 271 LVRNHLEGAPEQALWIVPTLGHEARRI---PNLLAHDATWMPDGRHILFANGSS------ 321

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERL 297
             +        ++  +        R+S +GK    ++         ++ +       + +
Sbjct: 322 LFLAADDGSNVRKFADLSGRAFWLRWSPDGKLLRFTLLDPATHNTALWQIASDGTHPQAV 381

Query: 298 T---NTLFINISASYSPDSSQIVFESDRE-----GKEQLYVMQSN----GSDQKRISQDK 345
                        S++ DS   VF+S R        + ++ + +      S+  +++ + 
Sbjct: 382 FPANTAPTNECCGSWTSDSRYFVFQSTRGAASANATQNIWAVDNQHRWLDSNPFQVT-NG 440

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSL 404
             SY  P  +  G  I F      + ++        Q + L +DS++      S  GR +
Sbjct: 441 PLSYQGPATARTGHTIFFLGL-NARMSLLRFDLATHQFKPLRQDSSMMGHTQVSYDGRWI 499

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            +  + DG     L+    +G     L + P       W  
Sbjct: 500 AWINQSDG----SLWRSRADGSERLQLTSAPTEVFRMHWSA 536



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 78/229 (34%), Gaps = 23/229 (10%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A+  +        + +           G    M   P  +++G R +  +  + A  + 
Sbjct: 179 LAFTWWRSAQHPTPFAIHQITFSGMISPGE-PEMEALPSLATDGPRLIAPIITEGASRLS 237

Query: 286 SVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQ 338
            V +    T  L          I      SPD ++++  +  EG  +  L+++ + G + 
Sbjct: 238 QVSISEGQTTSLDLPPDIAGPAIGD---ISPDGTRLLVRNHLEGAPEQALWIVPTLGHEA 294

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTW 397
           +RI         D  W P G  I F   S    ++ +   DGS  R   +         W
Sbjct: 295 RRI---PNLLAHDATWMPDGRHILFANGS----SLFLAADDGSNVRKFADLSGRAFWLRW 347

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI----NTPAYASDPQW 442
           SP G+ L F+        + L+ I  +G +   +      P       W
Sbjct: 348 SPDGKLLRFTLLDPATHNTALWQIASDGTHPQAVFPANTAPTNECCGSW 396


>gi|163847905|ref|YP_001635949.1| WD-40 repeat-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222525781|ref|YP_002570252.1| WD40 repeat-containing serine/threonine protein kinase
           [Chloroflexus sp. Y-400-fl]
 gi|163669194|gb|ABY35560.1| WD-40 repeat protein [Chloroflexus aurantiacus J-10-fl]
 gi|222449660|gb|ACM53926.1| serine/threonine protein kinase with WD40 repeats [Chloroflexus sp.
           Y-400-fl]
          Length = 1001

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 58/318 (18%), Positives = 107/318 (33%), Gaps = 41/318 (12%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWD    ++I         A  R   H  SD I        G            + S  
Sbjct: 473 RLWDTGTGREI---------AQLR--GH--SDWIRSLAFSPDG----------RLLASAS 509

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           +  ++ + +        +      +     FSP+ Q +A A+ D    L       +ID 
Sbjct: 510 VDQTIRIWEVTSGQTTAILRGHTDLPGNVAFSPDGQWLASASRDGTARLWDVSSGQQIDA 569

Query: 249 -----APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
                      N    +    FS +G++  +        ++Y +D  +   +R L     
Sbjct: 570 FSFSAPVDPTTNAPFWLTGIAFSGDGRQIAV---GSVNGNVYLLDAATGNVQRELRGHDG 626

Query: 303 INI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             +    +YSPD   +   S  +G  +L+        ++ + Q +        WSP G  
Sbjct: 627 WVVIRGVAYSPDGRLLASASL-DGSVRLW--SPTSGAERGVLQQRGLRLLGLSWSPDGTR 683

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           I  +   G    I  ++     +   V    +    +SP G+ L+ S     +   +++ 
Sbjct: 684 ILSSSDMGGNLVIWDVESTQVLQSFQVTQGVVTGVRYSPDGQRLVAS---GANGAVRVHM 740

Query: 421 IDLNGRNETLINTPAYAS 438
           +D +GR  +L    A A 
Sbjct: 741 LD-SGRTTSLDGGAATAQ 757



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 84/239 (35%), Gaps = 23/239 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D     ++      +  +    FSP+   +A      +D   V L DT   R   +
Sbjct: 429 IQLRDASSFLVQATLSGHEGDVSSLAFSPDGAILA---SGAQDDPVVRLWDTGTGREIAQ 485

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      I +  FS +G+    S   D+ + I+ V      T  L     +  + ++SPD
Sbjct: 486 LRGHSDWIRSLAFSPDGRLLA-SASVDQTIRIWEV-TSGQTTAILRGHTDLPGNVAFSPD 543

Query: 313 SSQIVFESDREGKEQLYVMQS-------NGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              +   S R+G  +L+ + S       + S     + +         +S  G  IA   
Sbjct: 544 GQWLASAS-RDGTARLWDVSSGQQIDAFSFSAPVDPTTNAPFWLTGIAFSGDGRQIAVGS 602

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +G    + ++       +  +   +         +SP GR L  +     D   +L+S
Sbjct: 603 VNG---NVYLLDAATGNVQRELRGHDGWVVIRGVAYSPDGRLLASASL---DGSVRLWS 655



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 57/164 (34%), Gaps = 15/164 (9%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFES 320
           A  +S +G    ++V       I   D  S   +  L+       S ++SPD + +   S
Sbjct: 411 AAAYSPDGLLVAVAV----GSAIQLRDASSFLVQATLSGHEGDVSSLAFSPDGAILA--S 464

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +    + +  +    +    +          +SP G L+A          I + +   
Sbjct: 465 GAQDDPVVRLWDTGTGREIAQLRGHSDWIRSLAFSPDGRLLASASVDQT---IRIWEVTS 521

Query: 381 SQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            Q   ++           +SP G+ L  S  +DG   ++L+ + 
Sbjct: 522 GQTTAILRGHTDLPGNVAFSPDGQWLA-SASRDGT--ARLWDVS 562



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 74/231 (32%), Gaps = 10/231 (4%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  +D  G+         +        SP++  +A      E    VYL +T   +  +
Sbjct: 775 EIVTIDLTGSRPNEQLSGMNGFPLNLTVSPDRSMIAVGNEQGE----VYLWETSSRQFLR 830

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--LQSNATERLTNTLFINISASY 309
           R+      I +  FS NG        +       +V    +    + L        S  +
Sbjct: 831 RLSGLSGPIYSLAFSDNGAYLAAVTNQPADAPQIAVWEMARGGQPQILRGHNGPVTSLIF 890

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSG 368
               + ++  +  +G  ++  +  N ++  +I   +   +F     +P   L+     SG
Sbjct: 891 V---NNLLLSASSDGLLRVRDVTRNNNEVLQIEVPQNWGWFTSLAVTPDHTLLIAGTISG 947

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                 +      +E  L E   + A   +  G  L  S + +G     L 
Sbjct: 948 HLLFYRLDDGTLLREIDLAEYGAVLAVAVTSDGTQLAVSTRDEGILLFDLM 998



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 47/144 (32%), Gaps = 13/144 (9%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A+YSPD   +           + +  ++    +      E       +SP G ++A    
Sbjct: 412 AAYSPDGLLVAVAV----GSAIQLRDASSFLVQATLSGHEGDVSSLAFSPDGAILASGAQ 467

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +          +L      +++  +SP GR L  +     D   +++ +     
Sbjct: 468 DDPVVRLWDTGTGREIAQLRGHSDWIRSLAFSPDGRLLASASV---DQTIRIWEVTSGQT 524

Query: 427 NETL---INTPA---YASDPQWVG 444
              L    + P    ++ D QW+ 
Sbjct: 525 TAILRGHTDLPGNVAFSPDGQWLA 548


>gi|145492580|ref|XP_001432287.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124399398|emb|CAK64890.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1103

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 90/255 (35%), Gaps = 15/255 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    S+ + D             + ++    FSP+   +A  + D      + L +  
Sbjct: 460 SGSQDESIRLWDVKTGQQISQFDGHNDVVSSVCFSPDGSILASGSSDK----SIRLWNVN 515

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
            ++   ++ N    +L+  FS +G+    S   D  + ++  D ++   + +        
Sbjct: 516 TEQQIAKLENHSREVLSVCFSPDGQTLA-SGSNDYTIRLW--DFKTGQQKAQFNGHKMFV 572

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  +SPD + +   S       + +       QK   +++  +     +SP G  +A +
Sbjct: 573 NSVCFSPDGTTLASGS---ADNSIRLWDVKTGQQKAKLENQNETVRSVCFSPDGTTLA-S 628

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               +   +  +K    + +L   +  +Q+  +SP G +L        D   +L+ +   
Sbjct: 629 GHVDKSIRLWDVKSGYQKVKLEGHNGVVQSVCFSPDGMTLA---SCSNDYSVRLWDVKAG 685

Query: 425 GRNETLINTPAYASD 439
            +   L         
Sbjct: 686 EQKAQLDGHSGQVQS 700



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 109/324 (33%), Gaps = 49/324 (15%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K          RLWDVK  +QI   +F           H   D +        G     
Sbjct: 456 TKLASGSQDESIRLWDVKTGQQI--SQFDG---------HN--DVVSSVCFSPDGSIL-- 500

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                    SG    S+ + + +         +  + +    FSP+ Q +A  + D    
Sbjct: 501 --------ASGSSDKSIRLWNVNTEQQIAKLENHSREVLSVCFSPDGQTLASGSND---- 548

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D +  +   +    +  + +  FS +G     S   D ++ ++  D+++   + 
Sbjct: 549 YTIRLWDFKTGQQKAQFNGHKMFVNSVCFSPDGTTLA-SGSADNSIRLW--DVKTGQQKA 605

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPV 353
           +L N      S  +SPD + +       G   + + +       QK   +          
Sbjct: 606 KLENQNETVRSVCFSPDGTTLA-----SGHVDKSIRLWDVKSGYQKVKLEGHNGVVQSVC 660

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +SP G  +A          +  +K    + +L      +Q+  +SP+  +L        D
Sbjct: 661 FSPDGMTLASCSNDYSV-RLWDVKAGEQKAQLDGHSGQVQSVCFSPNDNTLA---SGSSD 716

Query: 414 TGSKLYSI-------DLNGRNETL 430
              +L+ +        L+G ++T+
Sbjct: 717 NSIRLWDVKTRQQKTKLDGHSQTV 740



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 85/222 (38%), Gaps = 17/222 (7%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N  +       ++    FSP+  K+A  + D+     + L D +  +   +      ++ 
Sbjct: 434 NDLHQLVGHSNLVLSVCFSPDGTKLASGSQDE----SIRLWDVKTGQQISQFDGHNDVVS 489

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +  FS +G   L S   D+++ +++V+ +     +L N     +S  +SPD   +   S+
Sbjct: 490 SVCFSPDG-SILASGSSDKSIRLWNVNTE-QQIAKLENHSREVLSVCFSPDGQTLASGSN 547

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 + +       QK      +       +SP G  +A          I +      
Sbjct: 548 ---DYTIRLWDFKTGQQKAQFNGHKMFVNSVCFSPDGTTLASGSADNS---IRLWDVKTG 601

Query: 382 QERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           Q++  +E+ N  +++  +SP G +L        D   +L+ +
Sbjct: 602 QQKAKLENQNETVRSVCFSPDGTTLA---SGHVDKSIRLWDV 640



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 116/336 (34%), Gaps = 42/336 (12%)

Query: 120  GKDRLRVEFRLWDVKDRKQ---IIGKKFFS-----SPASWRKIAHTISDDIY-------- 163
                     RLWDVK R+Q   + G          SP      + ++ D I         
Sbjct: 711  ASGSSDNSIRLWDVKTRQQKTKLDGHSQTVQSLCFSPDGSTLASGSLDDSILLWDWKTGQ 770

Query: 164  --QSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
                + G     +S       ++  SG   N + + D     I+        I+    FS
Sbjct: 771  QKAKLDGHTNSVSSVCFSPDGTLLASGSSDNQILIWDVKTGVIKTKFHGHTYIVNSVCFS 830

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
             + + +A  + D      + L D    +   ++    ++++A  FS +      S   D+
Sbjct: 831  SDGKTLASGSNDK----TIRLWDITTGQQIAKLNGHTNLVIAVCFSPDHITLA-SGSHDQ 885

Query: 281  AMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            ++ ++  D ++     +L        S  +SP+   +   S     + + +       Q 
Sbjct: 886  SILLW--DYKTGKQRAKLDGHSDTVQSVCFSPNGLTLASCSH---DQTIRLWDVQTGQQI 940

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTW 397
            +     ++      +SP G ++A   +      I +      ++  +L+  D+ +Q   +
Sbjct: 941  KKLDGHDSYIRSVCFSPDGTILASGSYDKS---IRLWDAKTGEQKAKLVGHDTWVQTVCF 997

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            SP G +L       G T   +   D+  +   ++ +
Sbjct: 998  SPDGMTLA-----SGSTDQSIRVWDV--KKRQILPS 1026



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 104/316 (32%), Gaps = 42/316 (13%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             RLWDVK  +Q    +        + +  + +D                      ++ S
Sbjct: 676 SVRLWDVKAGEQ--KAQLDGHSGQVQSVCFSPND---------------------NTLAS 712

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G   NS+ + D      +       Q +    FSP+   +A  + DD     + L D + 
Sbjct: 713 GSSDNSIRLWDVKTRQQKTKLDGHSQTVQSLCFSPDGSTLASGSLDD----SILLWDWKT 768

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINI 305
            +   ++    + + +  FS +G     S   D  + I+  D+++     +     +I  
Sbjct: 769 GQQKAKLDGHTNSVSSVCFSPDGTLLA-SGSSDNQILIW--DVKTGVIKTKFHGHTYIVN 825

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S  +S D   +   S+    + + +       Q               +SP    +A   
Sbjct: 826 SVCFSSDGKTLASGSN---DKTIRLWDITTGQQIAKLNGHTNLVIAVCFSPDHITLASGS 882

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  I +      ++R  ++  +   Q+  +SP+G +L        D   +L+ +  
Sbjct: 883 HDQS---ILLWDYKTGKQRAKLDGHSDTVQSVCFSPNGLTLASCSH---DQTIRLWDVQT 936

Query: 424 NGRNETLINTPAYASD 439
             + + L    +Y   
Sbjct: 937 GQQIKKLDGHDSYIRS 952



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 76/221 (34%), Gaps = 36/221 (16%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ +  G +   +  RLWD+   +QI                HT  + +           
Sbjct: 833  GKTLASGSNDKTI--RLWDITTGQQIAKLN-----------GHT--NLVIAVCFSPD--- 874

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     ++ SG    S+ + D      R         +    FSPN   +A  ++D 
Sbjct: 875  -------HITLASGSHDQSILLWDYKTGKQRAKLDGHSDTVQSVCFSPNGLTLASCSHDQ 927

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + L D +  +  K++    S I +  FS +G   L S   D+++ ++  D ++  
Sbjct: 928  ----TIRLWDVQTGQQIKKLDGHDSYIRSVCFSPDGT-ILASGSYDKSIRLW--DAKTGE 980

Query: 294  TE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             + +L        +  +SPD   +   S     + + V   
Sbjct: 981  QKAKLVGHDTWVQTVCFSPDGMTLASGST---DQSIRVWDV 1018



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 7/133 (5%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           DL+ N   +L     + +S  +SPD +++   S     E + +       Q         
Sbjct: 430 DLKINDLHQLVGHSNLVLSVCFSPDGTKLASGSQ---DESIRLWDVKTGQQISQFDGHND 486

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                 +SP G ++A +  S +   +  +  +    +L      + +  +SP G++L   
Sbjct: 487 VVSSVCFSPDGSILA-SGSSDKSIRLWNVNTEQQIAKLENHSREVLSVCFSPDGQTLA-- 543

Query: 408 RKKDGDTGSKLYS 420
                D   +L+ 
Sbjct: 544 -SGSNDYTIRLWD 555


>gi|145478957|ref|XP_001425501.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392572|emb|CAK58103.1| unnamed protein product [Paramecium tetraurelia]
          Length = 778

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 60/376 (15%), Positives = 113/376 (30%), Gaps = 64/376 (17%)

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ-DWNSLGAQVL--VTG------RVIKE 119
           +  +L  S  F+ +          N +    F   W ++    L  + G       V   
Sbjct: 365 LRCNLNGS-QFDNVDIGGV-----NLNGAQLFNCKWKNIKLNELNKLEGHESSVNSVSIS 418

Query: 120 GKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
               +          RLWD K  +              + + H   + + Q      G  
Sbjct: 419 PDGTILASGSADNSIRLWDSKTGEL-----------KAKLVGHE--NAVNQICFSRDG-- 463

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    ++ S     ++ + D      +         +    FSP+   +A  + D 
Sbjct: 464 --------TTLASVSGDRTIRLWDVKTGRQKAQLDGHTNSVLTVCFSPDNTILASGSADH 515

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                V L D    +   R+        +  FS +G     S   D ++ ++ V  Q   
Sbjct: 516 ----SVRLWDITTRKEKARLV---GHSNSVCFSPDGTTLA-SGSGDNSIRLWDVKRQEIK 567

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            + L        S  +SPD   +   S       + +       QK              
Sbjct: 568 AK-LEGHRDYVRSICFSPDGKTLASCS---ADSSIRIWDLKTGKQKIQLDGHSDGVLSIS 623

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKD 411
           +SP G  IA          I +   +  Q+++ +ED +   ++  +SP G  L       
Sbjct: 624 FSPSGTTIASGSKDNS---IRLWDVNTGQQKVKLEDHHDFIRSVCFSPDGTKLA---SGS 677

Query: 412 GDTGSKLYSIDLNGRN 427
           GD   +L+ ++   +N
Sbjct: 678 GDKSLRLWDVNTEKKN 693



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 91/248 (36%), Gaps = 22/248 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   NS+ + D     ++      +  + +  FS +   +A  + D      + L D +
Sbjct: 426 SGSADNSIRLWDSKTGELKAKLVGHENAVNQICFSRDGTTLASVSGDR----TIRLWDVK 481

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
             R   ++    + +L   FS +    L S   D ++ ++  D+ +   + RL       
Sbjct: 482 TGRQKAQLDGHTNSVLTVCFSPD-NTILASGSADHSVRLW--DITTRKEKARLVGHSN-- 536

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  +SPD + +   S   G   + +      + K   +          +SP G  +A  
Sbjct: 537 -SVCFSPDGTTLASGS---GDNSIRLWDVKRQEIKAKLEGHRDYVRSICFSPDGKTLASC 592

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                   I +      ++++ ++  +    + ++SPSG ++        D   +L+ ++
Sbjct: 593 SADSS---IRIWDLKTGKQKIQLDGHSDGVLSISFSPSGTTIA---SGSKDNSIRLWDVN 646

Query: 423 LNGRNETL 430
              +   L
Sbjct: 647 TGQQKVKL 654



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 92/271 (33%), Gaps = 40/271 (14%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWDVK  +Q    +      S   +  +  + I                       SG
Sbjct: 475 IRLWDVKTGRQ--KAQLDGHTNSVLTVCFSPDNTIL---------------------ASG 511

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              +S+ + D      +         +    FSP+   +A  + D+     + L D +  
Sbjct: 512 SADHSVRLWDITTRKEKARLVGHSNSVC---FSPDGTTLASGSGDN----SIRLWDVKRQ 564

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINIS 306
               ++   R  + +  FS +GK    S   D ++ I+  DL++   + +L       +S
Sbjct: 565 EIKAKLEGHRDYVRSICFSPDGKTLA-SCSADSSIRIW--DLKTGKQKIQLDGHSDGVLS 621

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+SP  + I   S       + +   N   QK   +D         +SP G  +A    
Sbjct: 622 ISFSPSGTTIASGSK---DNSIRLWDVNTGQQKVKLEDHHDFIRSVCFSPDGTKLA---S 675

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                ++ +   +  ++ L  +      PT+
Sbjct: 676 GSGDKSLRLWDVNTEKKNLGYDCCFKDHPTF 706



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 58/178 (32%), Gaps = 28/178 (15%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDV  R++I  K             H   D +        G     
Sbjct: 545 TTLASGSGDNSIRLWDV-KRQEIKAK----------LEGHR--DYVRSICFSPDG----- 586

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                +++ S    +S+ + D      +         +    FSP+   +A  + D+   
Sbjct: 587 -----KTLASCSADSSIRIWDLKTGKQKIQLDGHSDGVLSISFSPSGTTIASGSKDN--- 638

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             + L D    +   ++ +    I +  FS +G +   S   D+++ ++ V+ +    
Sbjct: 639 -SIRLWDVNTGQQKVKLEDHHDFIRSVCFSPDGTKLA-SGSGDKSLRLWDVNTEKKNL 694


>gi|296804522|ref|XP_002843113.1| ribosome assembly protein 4 [Arthroderma otae CBS 113480]
 gi|238845715|gb|EEQ35377.1| ribosome assembly protein 4 [Arthroderma otae CBS 113480]
          Length = 520

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 57/344 (16%), Positives = 111/344 (32%), Gaps = 51/344 (14%)

Query: 102 DWNSL-GAQVLVT-----GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
            W +  G + +V      G V       +    RLWD    + +  +         R +A
Sbjct: 98  SWAARNGHESIVQLLLDRGAVSASDDGTV----RLWDPASGQHL--QTLEGHSDPVRAVA 151

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
              S D  + +     D   R+   +                  G +++ L    D +  
Sbjct: 152 --FSPD-GRMLASVSDDGTVRLWDPAS-----------------GWHLQTLKGHGDPVRA 191

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              FSP+ + +A A+ D      V L D+   +  + +  +   I A  FS +G+  + S
Sbjct: 192 V-AFSPDGRILASASDDG----TVRLWDSASRQHLRILEGYGDSIRAVAFSPDGRMLV-S 245

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D  + ++         + L        + ++SPD   +   SD +G  +L+   S  
Sbjct: 246 ASDDGIVRLWD-PASGWHLQTLKGHGDPVRAVAFSPDGRILASASD-DGTVRLW--DSAL 301

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA- 394
               +  +          + P G ++      G    + +      Q    +E       
Sbjct: 302 GRHLQTLEGYGDPIRAVAFLPDGRMLISASDDG---IVRLWDPASGQHLQTLEGHGDSVR 358

Query: 395 -PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              +SP GR L        D   +L+    +GR+   +     +
Sbjct: 359 PVAFSPDGRMLALVSD---DGTVQLWD-SASGRHLQTLEGHGDS 398



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 62/341 (18%), Positives = 108/341 (31%), Gaps = 70/341 (20%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR++    D   V  RLWD   R+ +             +I     D I        G  
Sbjct: 198 GRILASASDDGTV--RLWDSASRQHL-------------RILEGYGDSIRAVAFSPDG-- 240

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             R+L       S      L      G +++ L    D +     FSP+ + +A A+ D 
Sbjct: 241 --RMLV----SASDDGIVRLWD-PASGWHLQTLKGHGDPVRAV-AFSPDGRILASASDDG 292

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                V L D+ + R  + +  +   I A  F  +G+   IS   D  + ++  D  S  
Sbjct: 293 ----TVRLWDSALGRHLQTLEGYGDPIRAVAFLPDGRML-ISASDDGIVRLW--DPASGQ 345

Query: 294 TERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             +       ++   ++SPD   +   SD +G  QL+   S      +  +    S    
Sbjct: 346 HLQTLEGHGDSVRPVAFSPDGRMLALVSD-DGTVQLW--DSASGRHLQTLEGHGDSIRAV 402

Query: 353 VWSPQGDLIAFTKFSGEKFA--------------------------IGVMKKDGSQERLL 386
            +SP G ++A                                    + +      +    
Sbjct: 403 AFSPDGRILALVSDDRTTLESYGNPVRAVAFLLDRRMLASASDDRIVRLWDPASGRYLQT 462

Query: 387 VEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +E      +A  +SP GR +         T   +  +D  G
Sbjct: 463 LEGHGDPVRAVAFSPDGRYI------KTKTNKDILIVDSTG 497


>gi|158335320|ref|YP_001516492.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158305561|gb|ABW27178.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1409

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 53/340 (15%), Positives = 114/340 (33%), Gaps = 41/340 (12%)

Query: 121 KDRLRVEFRLWDVKDRKQI-------IGKKFFSSPASWRKIAHTISDDIYQSITGEKG-- 171
                   RLWDV   + +          +  +  A  R+     SD   +    + G  
Sbjct: 263 SGSYDRTVRLWDVDTGQSLRVMEGHTDSVQSVAFSADGRRALSGSSDRTVRLWDVDTGQS 322

Query: 172 ----------DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
                      ++          +SG   N++ + D D      +       ++   FS 
Sbjct: 323 LRVMEGHTDYVWSVAFSADGHRALSGSDDNTVRLWDVDTGQSLRVMEGHTDSVWSVAFSA 382

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + ++    +YD      V L D    ++ + +    S + +  FS++G+R  +S  +D  
Sbjct: 383 DGRRALSGSYDR----TVRLWDVDTGQSLRVMEGHTSYVNSVAFSADGRR-ALSGSQDRT 437

Query: 282 MDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQK 339
           + ++  D+ +  T R+         S  +S D    +  S DR     + +   +     
Sbjct: 438 VRLW--DVDTGQTLRVMEGHTEYLQSVVFSADGHYALSGSYDRT----VRLWDVDTGQSL 491

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTW 397
           R+ +   +      +S  G   A +  S     +     D  Q   ++E       +  +
Sbjct: 492 RVMEGHTSYVLSVAFSADGRR-ALSGSSDRTVRLW--DVDTGQSLRVMEGHTDAVWSVAF 548

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           S  GR    +     D   +L+ +D  G++  ++     +
Sbjct: 549 SADGRR---ALSGSSDRTVRLWDVD-TGQSLRVMEGHTDS 584



 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 53/319 (16%), Positives = 107/319 (33%), Gaps = 41/319 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI-AHTISDDIYQSITGEKGD 172
           GR    G +   V  RLWDV   +            S R +  HT  D +        G 
Sbjct: 174 GRRALSGSNDNTV--RLWDVDTGQ------------SLRVMEGHT--DSVNSVAFSADG- 216

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                       +SG    ++ + D D      +       +    FS + ++    +YD
Sbjct: 217 ---------RRALSGSSDRTVRLWDVDTGQSLRVMEGHTDSVQSVAFSADGRRALSGSYD 267

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 V L D    ++ + +      + +  FS++G+R  +S   D  + ++ VD    
Sbjct: 268 R----TVRLWDVDTGQSLRVMEGHTDSVQSVAFSADGRR-ALSGSSDRTVRLWDVD-TGQ 321

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           +   +        S ++S D  + +  SD      + +   +     R+ +    S +  
Sbjct: 322 SLRVMEGHTDYVWSVAFSADGHRALSGSD---DNTVRLWDVDTGQSLRVMEGHTDSVWSV 378

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +S  G   A +        +  +    S   +    S + +  +S  GR    +     
Sbjct: 379 AFSADGRR-ALSGSYDRTVRLWDVDTGQSLRVMEGHTSYVNSVAFSADGRR---ALSGSQ 434

Query: 413 DTGSKLYSIDLNGRNETLI 431
           D   +L+ +D  G+   ++
Sbjct: 435 DRTVRLWDVD-TGQTLRVM 452



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/293 (14%), Positives = 91/293 (31%), Gaps = 36/293 (12%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI-AHTISDDIYQSITGEKGDFNSRILF 179
                   RLWDV   +            S R +  HT    +        G        
Sbjct: 473 SGSYDRTVRLWDVDTGQ------------SLRVMEGHT--SYVLSVAFSADG-------- 510

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                +SG    ++ + D D      +       ++   FS + ++    + D      V
Sbjct: 511 --RRALSGSSDRTVRLWDVDTGQSLRVMEGHTDAVWSVAFSADGRRALSGSSDR----TV 564

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L D    ++ + +      + +  FS++G R  +S   D  + ++ VD    +   +  
Sbjct: 565 RLWDVDTGQSLRVMEGHTDSVNSVAFSADGHR-ALSGSYDRTVRLWDVD-TGQSLRVMEG 622

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S ++S D  + +  S+      + +   +     R+ +         V+S  G 
Sbjct: 623 HTDAVWSVAFSADGRRALSGSN---DNTVRLWDVDTGQTLRVMEGHTEYLQSVVFSADGH 679

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             A +        +  +    +   +      + +  +S  GR   +S   +G
Sbjct: 680 Y-ALSGSQDRTVRLWDVDTGQTLRVMEGHTGEVWSVAFSADGRQ-YYSSASNG 730



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 69/176 (39%), Gaps = 18/176 (10%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF 318
           + +  FS++G+R  +S   D  + ++  D+ +  + R+      ++ S ++S D  + + 
Sbjct: 165 VWSVAFSADGRR-ALSGSNDNTVRLW--DVDTGQSLRVMEGHTDSVNSVAFSADGRRALS 221

Query: 319 -ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             SDR     + +   +     R+ +    S     +S  G       +      + +  
Sbjct: 222 GSSDRT----VRLWDVDTGQSLRVMEGHTDSVQSVAFSADGRRALSGSYDRT---VRLWD 274

Query: 378 KDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            D  Q   ++E      Q+  +S  GR    +     D   +L+ +D  G++  ++
Sbjct: 275 VDTGQSLRVMEGHTDSVQSVAFSADGRR---ALSGSSDRTVRLWDVD-TGQSLRVM 326



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 78/221 (35%), Gaps = 28/221 (12%)

Query: 129 RLWDVKDRKQIIGKKFFSSP-------ASWRKIAHTISDDIYQ----------SITGEKG 171
           RLWDV   + +   +  +         A  R+     SD   +           +     
Sbjct: 523 RLWDVDTGQSLRVMEGHTDAVWSVAFSADGRRALSGSSDRTVRLWDVDTGQSLRVMEGHT 582

Query: 172 DFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           D  + + F +     +SG    ++ + D D      +       ++   FS + ++    
Sbjct: 583 DSVNSVAFSADGHRALSGSYDRTVRLWDVDTGQSLRVMEGHTDAVWSVAFSADGRRALSG 642

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D+     V L D    +  + +      + +  FS++G    +S  +D  + ++  D+
Sbjct: 643 SNDN----TVRLWDVDTGQTLRVMEGHTEYLQSVVFSADGHY-ALSGSQDRTVRLW--DV 695

Query: 290 QSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLY 329
            +  T R+         S ++S D  Q  + S   G  +L+
Sbjct: 696 DTGQTLRVMEGHTGEVWSVAFSADGRQ-YYSSASNGVLRLW 735



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 51/166 (30%), Gaps = 30/166 (18%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI-AHTISDDIYQSITGEKGDFNSRILF 179
                   RLWDV   +            S R +  HT  D ++       G        
Sbjct: 599 SGSYDRTVRLWDVDTGQ------------SLRVMEGHT--DAVWSVAFSADG-------- 636

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                +SG   N++ + D D      +     + L    FS +     +          V
Sbjct: 637 --RRALSGSNDNTVRLWDVDTGQTLRVMEGHTEYLQSVVFSADG----HYALSGSQDRTV 690

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            L D    +  + +      + +  FS++G++   S   +  + ++
Sbjct: 691 RLWDVDTGQTLRVMEGHTGEVWSVAFSADGRQ-YYSSASNGVLRLW 735


>gi|108757111|ref|YP_632483.1| hypothetical protein MXAN_4308 [Myxococcus xanthus DK 1622]
 gi|108460991|gb|ABF86176.1| hypothetical protein MXAN_4308 [Myxococcus xanthus DK 1622]
          Length = 1161

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 72/184 (39%), Gaps = 5/184 (2%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           VA  T     +      +    R P R+          + + +G   + +  +  A +I+
Sbjct: 23  VALVTLIAGSVWAQDDENDGGLRTPTRLTVGVGDQFLGQLAPDGNTLIFASNRSIATEIF 82

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQD 344
           + DL+     RL +          SPD   +++ S R +   QL V +   + ++R   +
Sbjct: 83  TQDLERGRERRLFDEGADVTWPRISPDGKHLLYISFRNQAGGQLCVRELPTAKERRCL-E 141

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGR 402
            +A+     W      IA    +  +  + + + +   E  +    + NL +PT SP GR
Sbjct: 142 GDANALQAEWM-DASHIALVSRTTIQGDLHLSRVELGGEWRVTPLLERNLTSPTLSPDGR 200

Query: 403 SLIF 406
            L++
Sbjct: 201 WLVY 204



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 79/215 (36%), Gaps = 23/215 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P+   + +A+        ++  D    R  +R+ +  + +  PR S +GK  L    ++
Sbjct: 63  APDGNTLIFASNR-SIATEIFTQDLERGRE-RRLFDEGADVTWPRISPDGKHLLYISFRN 120

Query: 280 E-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +    +   +L +    R        + A +  D+S I   S    +  L++ +     +
Sbjct: 121 QAGGQLCVRELPTAKERRCLEGDANALQAEWM-DASHIALVSRTTIQGDLHLSRVELGGE 179

Query: 339 KRISQDKEASYFDPVWSPQGDLIAF------TKFSGEKF------AIGVMKKD--GSQER 384
            R++   E +   P  SP G  + +       +  G  F       +  ++ D  G++  
Sbjct: 180 WRVTPLLERNLTSPTLSPDGRWLVYVPIERSVRQVGPGFAARAAPHLEALRLDAPGAKPV 239

Query: 385 LLVED--SNLQAPTWSPSGRSLI---FSRKKDGDT 414
            L  D       PT+S  GR L    F    + D 
Sbjct: 240 PLSLDIPGQTGQPTFSRDGRYLYVVQFFTDSNADG 274



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 72/208 (34%), Gaps = 18/208 (8%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             +   D +    R L      +   PR SP+ + + Y ++ ++   ++ + +    +  
Sbjct: 79  TEIFTQDLERGRERRLFDEGADVT-WPRISPDGKHLLYISFRNQAGGQLCVRELPTAKE- 136

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASY 309
           +R     +  L   +  +     +  +     D++   ++     R+T  L  N  S + 
Sbjct: 137 RRCLEGDANALQAEWM-DASHIALVSRTTIQGDLHLSRVELGGEWRVTPLLERNLTSPTL 195

Query: 310 SPDSSQIVFE----SDREGKEQL----------YVMQSNGSDQKRISQDKEASYFDPVWS 355
           SPD   +V+     S R+                 + + G+    +S D       P +S
Sbjct: 196 SPDGRWLVYVPIERSVRQVGPGFAARAAPHLEALRLDAPGAKPVPLSLDIPGQTGQPTFS 255

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             G  +   +F  +  A GV+    S  
Sbjct: 256 RDGRYLYVVQFFTDSNADGVIDASDSGV 283



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 48/143 (33%), Gaps = 14/143 (9%)

Query: 313 SSQIVFESDREGKEQLYVM---------QSNGSDQKRISQ--DKEASYFDPVWSPQGDLI 361
             + V    R G   L  +           N    +  ++        F    +P G+ +
Sbjct: 10  GREAVLTRRRRGVVALVTLIAGSVWAQDDENDGGLRTPTRLTVGVGDQFLGQLAPDGNTL 69

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            F         I     +  +ER L ++  ++  P  SP G+ L++   ++   G +L  
Sbjct: 70  IFASNRSIATEIFTQDLERGRERRLFDEGADVTWPRISPDGKHLLYISFRN-QAGGQLCV 128

Query: 421 IDLNGRNETL-INTPAYASDPQW 442
            +L    E   +   A A   +W
Sbjct: 129 RELPTAKERRCLEGDANALQAEW 151



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 14/107 (13%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDE-------------DILRVYLMDTRIDRAPK 251
            +TP  ++ L  P  SP+ + + Y   +                 L    +D    +   
Sbjct: 181 RVTPLLERNLTSPTLSPDGRWLVYVPIERSVRQVGPGFAARAAPHLEALRLDAPGAKPVP 240

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERL 297
              +       P FS +G+   +     ++     +D   S    R+
Sbjct: 241 LSLDIPGQTGQPTFSRDGRYLYVVQFFTDSNADGVIDASDSGVLFRV 287


>gi|281410803|gb|ADA68814.1| HET-R [Podospora anserina]
          Length = 504

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 75/226 (33%), Gaps = 14/226 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG    ++ + D             +  ++   FSP+ Q++A    DD     V +
Sbjct: 18  QRLASGAGDRTVKIWDPASGQCFQTLEGHNGSVYSVAFSPDGQRLASGAVDD----TVKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +  + +      + +  FS++G+R   S   D+ + I+         + L    
Sbjct: 74  WDPASGQCLQTLEGHNGSVYSVAFSADGQRLA-SGAGDDTVKIWD-PASGQCLQTLEGHR 131

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++SPD  +        G   + +         +  +    S     +S  G  +
Sbjct: 132 GSVSSVAFSPDGQRFA---SGAGDRTIKIWDPASGQCLQTLEGHRGSVSSVAFSADGQRL 188

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
           A +        I        Q    +E    ++ +  +SP G+   
Sbjct: 189 A-SGAVDRTVKIW--DPASGQCLQTLEGHTGSVSSVAFSPDGQRFA 231



 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 96/310 (30%), Gaps = 33/310 (10%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGK--------KFFSSPASWRKIAHTISDDI------ 162
            +     +    ++WD    + +               SP   R  +  + D +      
Sbjct: 186 QRLASGAVDRTVKIWDPASGQCLQTLEGHTGSVSSVAFSPDGQRFASGVVDDTVKIWDPA 245

Query: 163 ----YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                Q++ G +G  +S       +   SG    ++ + D                ++  
Sbjct: 246 SGQCLQTLEGHRGSVSSVAFSPDGQRFASGAGDRTIRIWDPASGQCLQTLEGHRGWVYSV 305

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + Q+ A    DD     V + D    +  + + +    + +  FS +G+R   S  
Sbjct: 306 AFSADGQRFASGAGDD----TVKIWDPASGQCLQTLESHNGSVSSVAFSPDGQRLA-SGA 360

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + I+         + L     +  S ++S D  ++       G + + +       
Sbjct: 361 DDDTVKIWD-PASGQCLQTLEGHKGLVYSVTFSADGQRLA---SGAGDDTVKIWDPASGQ 416

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAP 395
             +  +    S     +SP G   A          + +      Q    +E    ++ + 
Sbjct: 417 CLQTLEGHRGSVHSVAFSPDGQRFASGAVDDT---VKIWDPASGQCLQTLEGHNGSVSSV 473

Query: 396 TWSPSGRSLI 405
            +S  G+ L 
Sbjct: 474 AFSADGQRLA 483



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 82/242 (33%), Gaps = 19/242 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG + +++ + D             +  ++   FS + Q++A    DD     V +
Sbjct: 60  QRLASGAVDDTVKIWDPASGQCLQTLEGHNGSVYSVAFSADGQRLASGAGDD----TVKI 115

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +  + +   R  + +  FS +G+R   S   D  + I+         + L    
Sbjct: 116 WDPASGQCLQTLEGHRGSVSSVAFSPDGQRFA-SGAGDRTIKIWD-PASGQCLQTLEGHR 173

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               S ++S D  ++   + DR     + +         +  +    S     +SP G  
Sbjct: 174 GSVSSVAFSADGQRLASGAVDRT----VKIWDPASGQCLQTLEGHTGSVSSVAFSPDGQR 229

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            A          + +      Q    +E    ++ +  +SP G+         GD   ++
Sbjct: 230 FASGVVDDT---VKIWDPASGQCLQTLEGHRGSVSSVAFSPDGQRFA---SGAGDRTIRI 283

Query: 419 YS 420
           + 
Sbjct: 284 WD 285



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 69/201 (34%), Gaps = 14/201 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  ++   FS + Q++A    D      V + D    +  + +      + +  FS
Sbjct: 1   LEGHNGSVYSVAFSADGQRLASGAGDR----TVKIWDPASGQCFQTLEGHNGSVYSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+R   S   D+ + I+         + L        S ++S D  ++       G +
Sbjct: 57  PDGQRLA-SGAVDDTVKIWD-PASGQCLQTLEGHNGSVYSVAFSADGQRLA---SGAGDD 111

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +         +  +    S     +SP G    F   +G++  I +      Q    
Sbjct: 112 TVKIWDPASGQCLQTLEGHRGSVSSVAFSPDGQR--FASGAGDR-TIKIWDPASGQCLQT 168

Query: 387 VED--SNLQAPTWSPSGRSLI 405
           +E    ++ +  +S  G+ L 
Sbjct: 169 LEGHRGSVSSVAFSADGQRLA 189


>gi|182437191|ref|YP_001824910.1| WD repeat-containing protein [Streptomyces griseus subsp. griseus
            NBRC 13350]
 gi|178465707|dbj|BAG20227.1| putative WD-repeat containing protein [Streptomyces griseus subsp.
            griseus NBRC 13350]
          Length = 1523

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 56/335 (16%), Positives = 109/335 (32%), Gaps = 35/335 (10%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQII--------------GKKFFSSPASWRKIAHTISDDI 162
               G        RLWDV   +                 G    ++ A   ++  T  D  
Sbjct: 920  TGGGPGNSVGSVRLWDVATGESAATLPVPSRAPVFSPDGDTLATATAGLVRLWDT--DTG 977

Query: 163  YQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
                T   GD ++ +         +     +  + D D   I          L    FSP
Sbjct: 978  RNKATLSGGDGDAVVFSPDGETLATAGSDRTARLWDADTGRITATFAGHSDRLTSVVFSP 1037

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + + +A A  D        L D         +    + + A  FS +G+    +   D  
Sbjct: 1038 DGETLATAGSDS----TARLWDVSTREVTATLTGHSAWVNAVVFSPDGETLA-TAGNDAT 1092

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            + ++ V   + A       L    S ++SPD + +      +G  +L+   ++ +     
Sbjct: 1093 VQVWDVSAAAFAA-----HLGSVGSVAFSPDGAAVA-TGSEDGTARLWEADTSTNTATL- 1145

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                + +    V+SP G+ +A     G+     + + D  +  +      +    +SP G
Sbjct: 1146 -TGHDGAVDAVVFSPDGETLA---TRGKDRTARLWEADTGRM-IASLTGPVDEMVFSPDG 1200

Query: 402  RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
              L  + + + ++G  L+  D  GR    +  P  
Sbjct: 1201 EVLATAAESESESGVHLWEAD-TGRMIASLTGPVD 1234



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 73/216 (33%), Gaps = 16/216 (7%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+   VA  + D        L +         +      + A  FS +G+    +  
Sbjct: 1114 AFSPDGAAVATGSEDG----TARLWEADTSTNTATLTGHDGAVDAVVFSPDGETLA-TRG 1168

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            KD    ++  D        LT          +SPD   +   ++ E +  +++ +++   
Sbjct: 1169 KDRTARLWEAD-TGRMIASLT---GPVDEMVFSPDGEVLATAAESESESGVHLWEADTG- 1223

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              R+         + V+SP G+++A    S     +           L  +   + A  +
Sbjct: 1224 --RMIASLTGPVDEMVFSPDGEVLATAAESESGVHLWEADTGRKTASLTGDPQFVNAVVF 1281

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            SP G +L            +L+ +   GRN   +  
Sbjct: 1282 SPDGETLA---TAGNHGTVRLWDV-GTGRNTATLTG 1313



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 79/234 (33%), Gaps = 23/234 (9%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+ + +A A   +     V+L +    R    +      + A  FS +G+    +   
Sbjct: 1238 FSPDGEVLATAAESESG---VHLWEADTGRKTASLTGDPQFVNAVVFSPDGETLA-TAGN 1293

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
               + ++ V      T  LT       S  +SP    +   +  +G  +L+   + G + 
Sbjct: 1294 HGTVRLWDV-GTGRNTATLTGHTAPVASVVFSPGGDTLA-SAGEDGTARLWDADT-GRNT 1350

Query: 339  KRIS-----QDKEASYFDPV--------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
              ++      + +     P         +SP G  +A T  +     +  ++  G    L
Sbjct: 1351 ATLTGHVGHYEGDREDSGPAPASVDAVVFSPDGGTLATTALTDRTVRLWDVRTGGHTATL 1410

Query: 386  LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                S++    +SPSG +L        +   +L+ +       T+         
Sbjct: 1411 TGHTSSVDLVAFSPSGETLA---TAGAEGTVRLWDVATARSTATITGHDGAVHS 1461



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 55/322 (17%), Positives = 96/322 (29%), Gaps = 41/322 (12%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     RLWDV   +                      D +  S  G+          
Sbjct: 868  ATGGEDGTVRLWDVATGRDTA--TLTGHTEGV--------DAVVFSPDGDALATAGSASV 917

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                   G    S+ + D          P   +    P FSP+   +A AT        V
Sbjct: 918  PETGGGPGNSVGSVRLWDVATGESAATLPVPSRA---PVFSPDGDTLATATAGL-----V 969

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             L DT   R    +        A  FS +G+    +   D    ++  D  +    R+T 
Sbjct: 970  RLWDTDTGRNKATLSGGDGD--AVVFSPDGETLATAGS-DRTARLW--DADTG---RITA 1021

Query: 300  TLFIN----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            T   +     S  +SPD   +   +  +   +L+    +  +         A     V+S
Sbjct: 1022 TFAGHSDRLTSVVFSPDGETLA-TAGSDSTARLW--DVSTREVTATLTGHSAWVNAVVFS 1078

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            P G+ +A    +G    + V     S         ++ +  +SP G ++    +   D  
Sbjct: 1079 PDGETLA---TAGNDATVQVWDV--SAAAFAAHLGSVGSVAFSPDGAAVATGSE---DGT 1130

Query: 416  SKLYSIDLNGRNETLINTPAYA 437
            ++L+  D +    TL       
Sbjct: 1131 ARLWEADTSTNTATLTGHDGAV 1152



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 70/225 (31%), Gaps = 23/225 (10%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + + D            Q +    FSP+ + +A       +   V L D    R    + 
Sbjct: 1257 LWEADTGRKTASLTGDPQFVNAVVFSPDGETLA----TAGNHGTVRLWDVGTGRNTATLT 1312

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF------INISAS 308
               + + +  FS  G     S  +D    ++  D     T  LT  +        +   +
Sbjct: 1313 GHTAPVASVVFSPGGDTLA-SAGEDGTARLWDAD-TGRNTATLTGHVGHYEGDREDSGPA 1370

Query: 309  --------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                    +SPD   +   +  +   +L+                 +S     +SP G+ 
Sbjct: 1371 PASVDAVVFSPDGGTLATTALTDRTVRLW--DVRTGGHTATLTGHTSSVDLVAFSPSGET 1428

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +A T  +     +  +    S   +   D  + +  +SP G SL 
Sbjct: 1429 LA-TAGAEGTVRLWDVATARSTATITGHDGAVHSLVFSPDGDSLA 1472



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 30/263 (11%)

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G    ++ + D              + +    FSP+   +A       +   V L D   
Sbjct: 828  GGGHGTVRLWDVTVGRDVATFAGHTKPVNAVAFSPDGDTLA----TGGEDGTVRLWDVAT 883

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKD----EAMDIYSV------DLQSNATER 296
             R    +      + A  FS +G     +              SV      D+ +  +  
Sbjct: 884  GRDTATLTGHTEGVDAVVFSPDGDALATAGSASVPETGGGPGNSVGSVRLWDVATGESA- 942

Query: 297  LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                   + +  +SPD   +           + +  ++    K      +      V+SP
Sbjct: 943  -ATLPVPSRAPVFSPDGDTLA----TATAGLVRLWDTDTGRNKATLSGGDGD--AVVFSP 995

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDT 414
             G+ +A    +G      +   D  +        + +  +  +SP G +L        D+
Sbjct: 996  DGETLA---TAGSDRTARLWDADTGRITATFAGHSDRLTSVVFSPDGETLA---TAGSDS 1049

Query: 415  GSKLYSIDLNGRNETLINTPAYA 437
             ++L+ +       TL    A+ 
Sbjct: 1050 TARLWDVSTREVTATLTGHSAWV 1072



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 73/230 (31%), Gaps = 26/230 (11%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+   +A           V L D  + R           + A  FS +G     +  
Sbjct: 817  AFSPDSAVLA----MGGGHGTVRLWDVTVGRDVATFAGHTKPVNAVAFSPDGDTLA-TGG 871

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            +D  + ++ V      T  LT       +  +SPD   +   +      +      N   
Sbjct: 872  EDGTVRLWDV-ATGRDTATLTGHTEGVDAVVFSPDGDALA-TAGSASVPETGGGPGNSVG 929

Query: 338  QKRISQDKEA--------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              R+                  PV+SP GD +A    +     + +   D  + +  +  
Sbjct: 930  SVRLWDVATGESAATLPVPSRAPVFSPDGDTLA----TATAGLVRLWDTDTGRNKATLSG 985

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
             +  A  +SP G +L        D  ++L+  D       +  T A  SD
Sbjct: 986  GDGDAVVFSPDGETLA---TAGSDRTARLWDADTG----RITATFAGHSD 1028



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 65/225 (28%), Gaps = 20/225 (8%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            ++A A Y                  P +R  N    + +  FS +G+           +
Sbjct: 738 SRLAIAAYRTSPTSEAADALRAAAAVPLRRSINDSRPVKSVVFSPDGRTLAAGAFDGVGL 797

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                D+ +              S ++SPDS+ +       G   + +            
Sbjct: 798 W----DMATGRKT--ATFAAPVTSVAFSPDSAVLAMG---GGHGTVRLWDVTVGRDVATF 848

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                      +SP GD +A T        +  +        L      + A  +SP G 
Sbjct: 849 AGHTKPVNAVAFSPDGDTLA-TGGEDGTVRLWDVATGRDTATLTGHTEGVDAVVFSPDGD 907

Query: 403 SLIFSRK-----KDGDTGSKLYSIDL----NGRNETLINTPAYAS 438
           +L  +         G  G+ + S+ L     G +   +  P+ A 
Sbjct: 908 ALATAGSASVPETGGGPGNSVGSVRLWDVATGESAATLPVPSRAP 952



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 60/201 (29%), Gaps = 14/201 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----------YATY 231
            E++ +     ++ + D                +    FSP    +A          +   
Sbjct: 1286 ETLATAGNHGTVRLWDVGTGRNTATLTGHTAPVASVVFSPGGDTLASAGEDGTARLWDAD 1345

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
               +   +       +   +  G   + + A  FS +G     +   D  + ++ V    
Sbjct: 1346 TGRNTATLTGHVGHYEGDREDSGPAPASVDAVVFSPDGGTLATTALTDRTVRLWDVRTGG 1405

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            +    LT         ++SP    +   +  EG  +L+      +         + +   
Sbjct: 1406 HTAT-LTGHTSSVDLVAFSPSGETLA-TAGAEGTVRLW--DVATARSTATITGHDGAVHS 1461

Query: 352  PVWSPQGDLIAFTKFSGEKFA 372
             V+SP GD +A    +   + 
Sbjct: 1462 LVFSPDGDSLATVSANVRLWH 1482



 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 47/167 (28%), Gaps = 25/167 (14%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWD    +        ++      + H      Y+    + G   + +  V  S   G 
Sbjct: 1340 RLWDADTGR--------NTATLTGHVGH------YEGDREDSGPAPASVDAVVFSPDGGT 1385

Query: 189  ------IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
                     ++ + D                +    FSP+ + +A           V L 
Sbjct: 1386 LATTALTDRTVRLWDVRTGGHTATLTGHTSSVDLVAFSPSGETLA----TAGAEGTVRLW 1441

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            D    R+   I      + +  FS +G     +V  +  +  +    
Sbjct: 1442 DVATARSTATITGHDGAVHSLVFSPDGDSLA-TVSANVRLWHHIAPA 1487


>gi|114562258|ref|YP_749771.1| peptidase S41 [Shewanella frigidimarina NCIMB 400]
 gi|114333551|gb|ABI70933.1| peptidase S41 [Shewanella frigidimarina NCIMB 400]
          Length = 1094

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 116/307 (37%), Gaps = 36/307 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           ++    +   +N R+ FVS+   +      +  M  DG +I+ LT   D  + + +   N
Sbjct: 215 HEGSVKQPMLWNQRVYFVSDQSGNDN----IWSMTLDGKDIKQLTQYSDWQVRDAQL-NN 269

Query: 223 QQKVAYATYDDE---------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            + +     D +           + + L      R  + + +      +  FS  G   +
Sbjct: 270 GRIIFQQGADIKLLNLADLAESTVAIELTSDFTHRREQWVNDPMDYATSTVFSHQGDNVV 329

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVM 331
           I+ +      +           ++ ++   +    A  S D   +   SD  G+++++  
Sbjct: 330 ITAR----SHVAIASNDGRRLVQI-DSPADSRVRDALLSDDGKWVYGISDASGEQEIWQY 384

Query: 332 QSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            ++GS   K++++D          SP G  +    + G    + ++       + ++++ 
Sbjct: 385 PADGSAGAKQLTKDGSTLRTSLSLSPNGRYLVHDDYMG---NVWLLDLSRYNNQKIIQNG 441

Query: 391 NLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLIN------TPAYASD 439
               P     WS   + +  ++ + G    ++    +N  +++TL        +P+++ D
Sbjct: 442 EGLGPYQDIKWSGDSQFIALTKAEIGKQRPQIVLYSINESKSQTLTTDKYESFSPSFSHD 501

Query: 440 PQWVGFM 446
            +W+ F+
Sbjct: 502 GKWLYFL 508



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 72/198 (36%), Gaps = 22/198 (11%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+ +  +  L    S +GK    +   + A ++Y + +     +R++          ++ 
Sbjct: 63  RLTSLAAEELDATISKDGKWVAYTANYEGATEVYVMPIAGGVAKRVSFENSRVRLQGWTA 122

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
               +    +  G    +V+++       I+    A   +     +G+ + FT+F     
Sbjct: 123 SGEVLYSTDNAFGPANFWVLKTVDPQSLTITDLPLADAVEGTIDDKGEYVYFTQFGLQVS 182

Query: 367 --------SGEKFAIGVMKKDGSQE-RLLV--EDSNLQAPT-WSPSGRSLIFSRKKDGDT 414
                    G K  I   K    QE + L    + +++ P  W    + + F   + G  
Sbjct: 183 GDNVKVYRGGAKGEIWRYKLGSKQEAQQLTSAHEGSVKQPMLW---NQRVYFVSDQSG-- 237

Query: 415 GSKLYSIDLNGRNETLIN 432
              ++S+ L+G++   + 
Sbjct: 238 NDNIWSMTLDGKDIKQLT 255



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/275 (13%), Positives = 82/275 (29%), Gaps = 70/275 (25%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGN-FRSMILAP-RFSSNGKRALISVQKDEAMDIYSVD 288
           Y       ++       +  +++ +     +  P  ++   +R      +    +I+S+ 
Sbjct: 189 YRGGAKGEIWRYKLGSKQEAQQLTSAHEGSVKQPMLWN---QRVYFVSDQSGNDNIWSMT 245

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVF-----------------------ESDREGK 325
           L     ++LT      +  +   +  +I+F                        SD   +
Sbjct: 246 LDGKDIKQLTQYSDWQVRDAQLNNG-RIIFQQGADIKLLNLADLAESTVAIELTSDFTHR 304

Query: 326 EQLYVMQS-----------------------------NGSDQKRISQDKEASYFDPVWSP 356
            + +V                                +G    +I    ++   D + S 
Sbjct: 305 REQWVNDPMDYATSTVFSHQGDNVVITARSHVAIASNDGRRLVQIDSPADSRVRDALLSD 364

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGD 413
            G  +     +  +  I     DGS   + L +D +    + + SP+GR L+       D
Sbjct: 365 DGKWVYGISDASGEQEIWQYPADGSAGAKQLTKDGSTLRTSLSLSPNGRYLV-----HDD 419

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDP----QWVG 444
               ++ +DL+  N   I        P    +W G
Sbjct: 420 YMGNVWLLDLSRYNNQKIIQNGEGLGPYQDIKWSG 454



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 66/188 (35%), Gaps = 23/188 (12%)

Query: 275 SVQKDEAMDIYSVDLQSNAT-ERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +     +I+   L S    ++LT+              + ++ F SD+ G + ++ M 
Sbjct: 188 VYRGGAKGEIWRYKLGSKQEAQQLTSAHEGSVKQPMLW--NQRVYFVSDQSGNDNIWSMT 245

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSN 391
            +G D K+++Q  +    D         I F +   +   + +     S   + L  D  
Sbjct: 246 LDGKDIKQLTQYSDWQVRDAQL--NNGRIIF-QQGADIKLLNLADLAESTVAIELTSDFT 302

Query: 392 LQAPTWSPS----GRSLIFSRKKDG---DTGSKLYSIDLNGRNETLINTPAYAS------ 438
            +   W         S +FS + D       S +     +GR    I++PA +       
Sbjct: 303 HRREQWVNDPMDYATSTVFSHQGDNVVITARSHVAIASNDGRRLVQIDSPADSRVRDALL 362

Query: 439 --DPQWVG 444
             D +WV 
Sbjct: 363 SDDGKWVY 370



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 95/271 (35%), Gaps = 32/271 (11%)

Query: 193 LCVMDRDGANIRYLTPSRDQI--LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           + ++D    N + +  + + +    + ++S + Q +A    +        ++ +  +   
Sbjct: 424 VWLLDLSRYNNQKIIQNGEGLGPYQDIKWSGDSQFIALTKAEIGKQRPQIVLYSINESKS 483

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQK-------------------DEAMDIYSVDLQS 291
           + +   +    +P FS +GK       +                   D+   ++++ L +
Sbjct: 484 QTLTTDKYESFSPSFSHDGKWLYFLSNREFKANPGSPWGDRNMGPIFDKRTQVFALALDA 543

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            A    +         + + D+ +   +S  +       ++ +G + +R+ Q    +   
Sbjct: 544 KA----SFPFAKPTELTVNKDAKKA--DSKDQDIPAKVKVEWDGLN-QRLWQVPVDAGNY 596

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +   D +     S +K  + ++K D    ++     ++   + S  G  ++  ++ D
Sbjct: 597 NSLTAAKDKLYLLDGSQDKSELKLIKFDPLNIKVDAFSEDVGQYSLSKDGSKIMLRKQSD 656

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             +   L  +D  G       + A  S  QW
Sbjct: 657 PKS---LMIVDA-GDKLPSDVSRAKVSTDQW 683


>gi|307151414|ref|YP_003886798.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306981642|gb|ADN13523.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 1163

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 127/308 (41%), Gaps = 42/308 (13%)

Query: 130  LWDVK---DRKQIIGKKFFSSPASWR--KIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            ++D+    D K++       +   W+  +   T+  +  + IT    +FN  +L      
Sbjct: 809  IYDIYWSSDGKELATASGDGTVKLWQINEKNLTLISNAQRGITNVSFNFNGSLL------ 862

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                    + + D  G N+++   S  + +++ RFSP+ Q++A  +        + + D 
Sbjct: 863  AKAYKDGEIYLTDLQG-NLKHQFDSGLEWIYDLRFSPDGQQIAAVS----RGGMIKIWDL 917

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-- 302
                + + +G+  + I +  FS +GK    +  ++  + ++  +L  N  + L+N     
Sbjct: 918  TGKPSREWLGDS-NNIYSLAFSPDGKLLA-TGNQEGKVKVW--NLTGNPPQLLSNFSAHK 973

Query: 303  --INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              IN S ++SPD   I+  +  +G  +L+     G+ Q  + + +EA Y   ++SP G  
Sbjct: 974  DMIN-SLNFSPDGQNIL-TASADGLAKLW--DLQGNLQAELKEHQEAVYGA-IFSPDGKY 1028

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGS 416
            IA     G      +  ++G   + +        P     +SP  + +        D  +
Sbjct: 1029 IATASKDGTAL---LWNQEG---QQIAALQGDLFPVYRIAFSPDEKYIA---TGSSDGTT 1079

Query: 417  KLYSIDLN 424
            +L+ I  N
Sbjct: 1080 RLWDIKGN 1087



 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 59/352 (16%), Positives = 129/352 (36%), Gaps = 37/352 (10%)

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR-VEFRLWDVKDRKQIIGKKFF 145
               +    +I + +  +    +  +  ++ + G    R  EF   +        G++  
Sbjct: 463 MLSLMGAVIAIIQAKSASDKQREAQIGTQLQRSGDTAWRQFEFDEIEALLSAMQTGQELK 522

Query: 146 SSPASWRKIAHTIS-------DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++    R + +  +       + I + IT +      +    S S+     K  +    R
Sbjct: 523 NTVKDGRLLENYPATSPLVTLEQILEQITEKNSLKGHQDTVYSVSISPD--KKLIASASR 580

Query: 199 DG----ANIR----YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           DG     N +          +  ++   FSP+ Q +A A+ D    L      T+  +  
Sbjct: 581 DGTVKIWNPQGKQLATLRGHEGTIYGVSFSPDGQYIATASRDKTAKLW-----TKEGKLI 635

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             +   +  +    FS +GK    +  +D    ++  D + +    L          S+S
Sbjct: 636 ATLRGHKGSVYNVTFSPDGKLIA-TTSRDSTAILW--DKKGDKIAILRGHKKSVDDLSFS 692

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PDS +I   + R+G  +L+   + G+    + QD + +++   +S  G LIA     G  
Sbjct: 693 PDSKRIA-TASRDGTVKLW--DTKGNFLGNLKQD-DVAFYSVDFSHDGKLIAVASSDG-- 746

Query: 371 FAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             + V    G+    +      +    +SP+G+ +  +     D  +KL+++
Sbjct: 747 -VVKVSDLQGNLIVTIKGHQDFVNRVRFSPNGQWIATASS---DGTAKLWNL 794



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 88/246 (35%), Gaps = 20/246 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +         ++    SP+++ +A A+ D    ++++       +    +      I  
Sbjct: 552 EKNSLKGHQDTVYSVSISPDKKLIASASRD--GTVKIWNPQ---GKQLATLRGHEGTIYG 606

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             FS +G+    +  +D+   +++   +      L        + ++SPD   I   S  
Sbjct: 607 VSFSPDGQYIA-TASRDKTAKLWT--KEGKLIATLRGHKGSVYNVTFSPDGKLIATTS-- 661

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             ++   ++     D+  I +  + S  D  +SP    IA     G    + +    G+ 
Sbjct: 662 --RDSTAILWDKKGDKIAILRGHKKSVDDLSFSPDSKRIATASRDGT---VKLWDTKGNF 716

Query: 383 ERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY---SIDLNGRNETLINTPAYAS 438
              L  +D    +  +S  G+ +  +        S L     + + G ++  +N   ++ 
Sbjct: 717 LGNLKQDDVAFYSVDFSHDGKLIAVASSDGVVKVSDLQGNLIVTIKG-HQDFVNRVRFSP 775

Query: 439 DPQWVG 444
           + QW+ 
Sbjct: 776 NGQWIA 781



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 65/309 (21%), Positives = 116/309 (37%), Gaps = 48/309 (15%)

Query: 157  TISDDIYQSITGEKG--DFNSRILFVSESVVSGIIKNSLCVMDRDG----ANIR----YL 206
             +SD     I   KG  DF +R+ F      +G     +     DG     N++      
Sbjct: 749  KVSDLQGNLIVTIKGHQDFVNRVRF----SPNGQW---IATASSDGTAKLWNLKGKELLT 801

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                 + +++  +S + +++A A+ D      V L     ++    I N +  I    F+
Sbjct: 802  LRGHQESIYDIYWSSDGKELATASGDG----TVKLWQIN-EKNLTLISNAQRGITNVSFN 856

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             NG        KD   +IY  DLQ N   +  + L       +SPD  QI   S R G  
Sbjct: 857  FNGSLLA-KAYKDG--EIYLTDLQGNLKHQFDSGLEWIYDLRFSPDGQQIAAVS-RGG-- 910

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             + +    G    R       + +   +SP G L+A     G    + V    G+  +LL
Sbjct: 911  MIKIWDLTG-KPSREWLGDSNNIYSLAFSPDGKLLATGNQEG---KVKVWNLTGNPPQLL 966

Query: 387  VEDSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-------RNETLINTPA 435
               S       +  +SP G++++ +     D  +KL+  DL G        ++  +    
Sbjct: 967  SNFSAHKDMINSLNFSPDGQNILTAS---ADGLAKLW--DLQGNLQAELKEHQEAVYGAI 1021

Query: 436  YASDPQWVG 444
            ++ D +++ 
Sbjct: 1022 FSPDGKYIA 1030


>gi|225619584|ref|YP_002720841.1| hypothetical protein BHWA1_00641 [Brachyspira hyodysenteriae WA1]
 gi|225214403|gb|ACN83137.1| hypothetical protein BHWA1_00641 [Brachyspira hyodysenteriae WA1]
          Length = 2326

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 83/195 (42%), Gaps = 24/195 (12%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE---GK 325
           G     S +     DI++VD  +  T RLT +  I+ S S    S  IVF S R+   G 
Sbjct: 58  GTWIYYSRENAGNTDIFAVDSYTLETYRLTRSPAIDTSVSIDDKSRYIVFSSTRDDAFGD 117

Query: 326 EQLYVMQSNG------------SDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFA 372
             LY + + G                R++ D +    DPV S +G++IAF     G    
Sbjct: 118 IYLYKLYNLGIRTSKNNLENLEQSIVRLT-DYKGYDTDPVVSHKGNIIAFVSDRDGGIKK 176

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNET- 429
           +  +K +G   + L  D    +PT+S     + F   K GD  S+L  +DL  N  NET 
Sbjct: 177 LFAVKPNGKDVQKL-SDIEASSPTFSFDDTKIAFITSKIGDKYSQLAILDLTHNTNNETN 235

Query: 430 ---LINTPAYASDPQ 441
              L +T  +  +P 
Sbjct: 236 LTILTDTETFKFNPT 250



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 67/179 (37%), Gaps = 22/179 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT-------------RIDRAPK 251
           Y       I          + + +++  D+    +YL                 ++++  
Sbjct: 84  YRLTRSPAIDTSVSIDDKSRYIVFSSTRDDAFGDIYLYKLYNLGIRTSKNNLENLEQSIV 143

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYS 310
           R+ +++     P  S  G        +D  +  +++V       ++L++      S ++S
Sbjct: 144 RLTDYKGYDTDPVVSHKGNIIAFVSDRDGGIKKLFAVKPNGKDVQKLSDIEA--SSPTFS 201

Query: 311 PDSSQIVFESDREG--KEQLYVMQS--NGSDQKRIS--QDKEASYFDPVWSPQGDLIAF 363
            D ++I F + + G    QL ++    N +++  ++   D E   F+P +     +I F
Sbjct: 202 FDDTKIAFITSKIGDKYSQLAILDLTHNTNNETNLTILTDTETFKFNPTFYNDDTIIFF 260


>gi|302896250|ref|XP_003047005.1| hypothetical protein NECHADRAFT_45956 [Nectria haematococca mpVI
           77-13-4]
 gi|256727933|gb|EEU41292.1| hypothetical protein NECHADRAFT_45956 [Nectria haematococca mpVI
           77-13-4]
          Length = 688

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 50/257 (19%), Positives = 91/257 (35%), Gaps = 49/257 (19%)

Query: 212 QILFEPRFSPNQQKVAY-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           QI F  +FSP+ QKV Y            +  ++L  T    + +++ + +     P + 
Sbjct: 22  QIPFYIKFSPDGQKVLYKTGTNPHKGKNSVSTLWLASTTEPGSSRQLTSGKFQEGDPEWH 81

Query: 267 SNGKRALISVQK---DEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFES 320
            +G +      +    E+  IY + L       +T   N   I+ S ++SP+   I + S
Sbjct: 82  PSGNQVAFVSDRAKPGESSAIYMLRLDGGDAVAITSADNAQDID-SLAFSPNGETIAYLS 140

Query: 321 -------------------DREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                              D  G      +L ++     + K +    +    D  WSP 
Sbjct: 141 ADEKTQELKEKEEKEESGPDVWGEKWEHARLRLVNVASKETKTLV-GGDRHISDFAWSPD 199

Query: 358 GDLIAFTKFSGEKFA--------IGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSR 408
           G  +AF   +             I  +  +  + R L +  N     TW+P G S+ F+ 
Sbjct: 200 GKSVAFFSIANPNIEEAMLTGTTICTVNVETGKVRDLCKVPNELNYLTWAPDG-SIYFTT 258

Query: 409 ---KKDGDTGSKLYSID 422
                    G  +Y++D
Sbjct: 259 GTPDNRDTGGPAVYTVD 275



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 87/222 (39%), Gaps = 42/222 (18%)

Query: 265 FSSNGKRALISVQKD---EAMDIYSVDLQS----NATERLTNTLFINISASYSPDSSQIV 317
           FS +G++ L     +       + ++ L S     ++ +LT+  F      + P  +Q+ 
Sbjct: 29  FSPDGQKVLYKTGTNPHKGKNSVSTLWLASTTEPGSSRQLTSGKFQEGDPEWHPSGNQVA 88

Query: 318 FESDR---EGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFS------ 367
           F SDR        +Y+++ +G D   I+    A   D   +SP G+ IA+          
Sbjct: 89  FVSDRAKPGESSAIYMLRLDGGDAVAITSADNAQDIDSLAFSPNGETIAYLSADEKTQEL 148

Query: 368 --------------GEKFA---IGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
                         GEK+    + ++     + + LV  D ++    WSP G+S+ F   
Sbjct: 149 KEKEEKEESGPDVWGEKWEHARLRLVNVASKETKTLVGGDRHISDFAWSPDGKSVAFFSI 208

Query: 410 KDGD------TGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
            + +      TG+ + ++++  G+   L   P   +   W  
Sbjct: 209 ANPNIEEAMLTGTTICTVNVETGKVRDLCKVPNELNYLTWAP 250



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 75/278 (26%), Gaps = 44/278 (15%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLCVMDRDGANIRYLTPSRD 211
           ++A  I D           D    +     +   G    ++L +             S  
Sbjct: 13  QLAEAICDLQIPFYIKFSPDGQKVLYKTGTNPHKGKNSVSTLWLASTTEPGSSRQLTSGK 72

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILR--VYLMDTRIDRAPKRIGNFRSMILAP-RFSSN 268
               +P + P+  +VA+ +   +      +Y++      A        +  +    FS N
Sbjct: 73  FQEGDPEWHPSGNQVAFVSDRAKPGESSAIYMLRLDGGDAVAITSADNAQDIDSLAFSPN 132

Query: 269 GKRALI-----------------------SVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           G+                             +K E   +  V++ S  T+ L        
Sbjct: 133 GETIAYLSADEKTQELKEKEEKEESGPDVWGEKWEHARLRLVNVASKETKTLVGGDRHIS 192

Query: 306 SASYSPDSSQIVFESDREGK--------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
             ++SPD   + F S               +  +       + + +          W+P 
Sbjct: 193 DFAWSPDGKSVAFFSIANPNIEEAMLTGTTICTVNVETGKVRDLCKVPN-ELNYLTWAPD 251

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           G  I FT  + +        +D     +   D     P
Sbjct: 252 GS-IYFTTGTPD-------NRDTGGPAVYTVDPAAAEP 281



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 86/262 (32%), Gaps = 41/262 (15%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYAT---- 230
           ++ FVS+    G   +++ ++  DG +   +T + +    +   FSPN + +AY +    
Sbjct: 86  QVAFVSDRAKPGE-SSAIYMLRLDGGDAVAITSADNAQDIDSLAFSPNGETIAYLSADEK 144

Query: 231 -----------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                            + ++       +     +  K +      I    +S +GK   
Sbjct: 145 TQELKEKEEKEESGPDVWGEKWEHARLRLVNVASKETKTLVGGDRHISDFAWSPDGKSVA 204

Query: 274 ISVQKDEAMD--------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----D 321
                +  ++        I +V++++     L          +++PD S I F +    +
Sbjct: 205 FFSIANPNIEEAMLTGTTICTVNVETGKVRDLCKVPNELNYLTWAPDGS-IYFTTGTPDN 263

Query: 322 RE-GKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           R+ G   +Y +    ++ K       E  +   +    G L+        +F   + +  
Sbjct: 264 RDTGGPAVYTVDPAAAEPKHAKIACGEHDHAAGLSVAGGKLLV---NRAVRFNNAITELG 320

Query: 380 GSQERLLVEDSNLQAPTWSPSG 401
           G        +        +P  
Sbjct: 321 GKDLFQRDTEIWAWDVFVNPDS 342



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 9/99 (9%)

Query: 350 FDPVWSPQGDLIAF------TKFSGEKFAIGVMKKD--GSQERLLVEDSNLQAPTWSPSG 401
           F   +SP G  + +       K       + +      GS  +L         P W PSG
Sbjct: 25  FYIKFSPDGQKVLYKTGTNPHKGKNSVSTLWLASTTEPGSSRQLTSGKFQEGDPEWHPSG 84

Query: 402 RSLIFSRKKDGDT-GSKLYSIDLNGRNETLINTPAYASD 439
             + F   +      S +Y + L+G +   I +   A D
Sbjct: 85  NQVAFVSDRAKPGESSAIYMLRLDGGDAVAITSADNAQD 123


>gi|153827560|ref|ZP_01980227.1| protein TolB [Vibrio cholerae MZO-2]
 gi|149738473|gb|EDM52869.1| protein TolB [Vibrio cholerae MZO-2]
          Length = 100

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 13 MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
          M   L  +L+LIG  F    +A +++       +  P++I   K+    +L   VS V++
Sbjct: 1  MFKRLVFVLMLIGTGFSNIANAALELVITDGIDSARPIAIVPFKWEGATKLPEDVSAVIA 60

Query: 71 KDLQRSDVFNLISQDSFKQKITNPDSI 97
           DLQRS  F+ +      Q   + + +
Sbjct: 61 SDLQRSGKFSPVPTSKMPQTPYSEEQL 87


>gi|222480106|ref|YP_002566343.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halorubrum lacusprofundi ATCC 49239]
 gi|222453008|gb|ACM57273.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halorubrum lacusprofundi ATCC 49239]
          Length = 633

 Score = 89.3 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 78/214 (36%), Gaps = 13/214 (6%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + DT      + + +  ++  +PR S +G+   +        +++ +D +    E+L++ 
Sbjct: 1   MSDTDDADVLRELASLPTIA-SPRVSPDGETVALYYDVTGRNELHLLDPRDGNREQLSDG 59

Query: 301 ---LFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWS 355
                +     + P   ++ +  D +G EQ  ++ M  +G  +  +  D +        S
Sbjct: 60  EVPRSVRAGFEWDPSGDRLFYHRDEDGDEQHDVWAMSLDGESEPIVEMDGQ--LRLHSVS 117

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKK-DGD 413
             G+ +        +  +        +   L + +  + A   +P G  + ++  + D  
Sbjct: 118 EDGETLLLGSSRDGQMNLYRHDLQSDETTKLTDYERAVAAGELAPDGDRIAYATNETDAY 177

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQ---WVG 444
               +Y  D +G N   ++     ++     W  
Sbjct: 178 ENLDVYVADADGSNPRNLDIGDVGAEAAPIDWGP 211



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 101/252 (40%), Gaps = 20/252 (7%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG   R +    +       + P+  ++ Y   +D D  +  +    +D   + I    
Sbjct: 57  SDGEVPRSVRAGFE-------WDPSGDRLFYHRDEDGDE-QHDVWAMSLDGESEPIVEMD 108

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             +     S +G+  L+   +D  M++Y  DLQS+ T +LT+      +   +PD  +I 
Sbjct: 109 GQLRLHSVSEDGETLLLGSSRDGQMNLYRHDLQSDETTKLTDYERAVAAGELAPDGDRIA 168

Query: 318 FESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAI 373
           + ++     +   +YV  ++GS+ + +      +   P  W P GD +  +  + +    
Sbjct: 169 YATNETDAYENLDVYVADADGSNPRNLDIGDVGAEAAPIDWGPDGDRLLVSDNTEDLNRS 228

Query: 374 GVMKKDG-----SQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G++   G     +       D   ++P+ +  +G   + SR +   T   +Y  D+    
Sbjct: 229 GIVDLSGDVSGAADVTWFGGDEFEESPSHFLEAGDQFVASRTRGAVTVPVIY--DVETGE 286

Query: 428 ETLINTPAYASD 439
              ++ PA  ++
Sbjct: 287 ARELDFPAGVAN 298



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/224 (21%), Positives = 89/224 (39%), Gaps = 15/224 (6%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF---RSMILAPRFSSN 268
             +  PR SP+ + VA   YD      ++L+D R D   +++ +    RS+     +  +
Sbjct: 17  PTIASPRVSPDGETVA-LYYDVTGRNELHLLDPR-DGNREQLSDGEVPRSVRAGFEWDPS 74

Query: 269 GKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           G R      +D     D++++ L    +E +          S S D   ++  S R+G+ 
Sbjct: 75  GDRLFYHRDEDGDEQHDVWAMSLD-GESEPIVEMDGQLRLHSVSEDGETLLLGSSRDGQM 133

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQE 383
            LY       +  +++ D E +      +P GD IA+     + +    + V   DGS  
Sbjct: 134 NLYRHDLQSDETTKLT-DYERAVAAGELAPDGDRIAYATNETDAYENLDVYVADADGSNP 192

Query: 384 RLL--VEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           R L   +     AP  W P G  L+ S   +    S +  +  +
Sbjct: 193 RNLDIGDVGAEAAPIDWGPDGDRLLVSDNTEDLNRSGIVDLSGD 236



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/189 (12%), Positives = 58/189 (30%), Gaps = 14/189 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDD 233
            RI + +           + V D DG+N R L          P  + P+  ++   + + 
Sbjct: 165 DRIAYATNET-DAYENLDVYVADADGSNPRNLDIGDVGAEAAPIDWGPDGDRLL-VSDNT 222

Query: 234 EDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSN-----GKRALISVQKDEAMDIYSV 287
           ED+ R  ++D   D +    +  F         S +     G + + S  +         
Sbjct: 223 EDLNRSGIVDLSGDVSGAADVTWFGGDEFEE--SPSHFLEAGDQFVASRTRGAVTVPVIY 280

Query: 288 DLQSNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           D+++     L     +        + D   + + +    + +L          + +   +
Sbjct: 281 DVETGEARELDFPAGVANVTEGRLA-DDRLLAYRTTSSRRPELVAYDLASDATETVLDAE 339

Query: 346 EASYFDPVW 354
              +    +
Sbjct: 340 YGPFAPDDF 348


>gi|17228254|ref|NP_484802.1| WD repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17130104|dbj|BAB72716.1| WD-repeat containing protein [Nostoc sp. PCC 7120]
          Length = 1329

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 67/187 (35%), Gaps = 10/187 (5%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+   VA A+    D      +     +  + I           FS +GK        
Sbjct: 1108 FSPDGHTVATASV-YRDSDISGSVKLWNLKGEEIITLQHGSFSDVLFSPDGKTIATVSTL 1166

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                 ++  +LQ      LT+  +IN   S+SPD   I     R G + + +    G + 
Sbjct: 1167 SNTAKLW--NLQGREIATLTHDGWIN-HISFSPDGKTI---GIRSGDKTVKLWNLRGQEI 1220

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
              +  +      DP++SP G  IA          +    +DGS ++    +   +   +S
Sbjct: 1221 ATLKHNSSTIVSDPIFSPDGKTIATVSLD-RTVRLWTEVRDGSWQQ--FAEYQSRRVVFS 1277

Query: 399  PSGRSLI 405
            P  + + 
Sbjct: 1278 PDNKLIA 1284



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 93/258 (36%), Gaps = 26/258 (10%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F+     V+ +   G  K    + +  G  I     +++       FSP+ + V  A++
Sbjct: 615 AFSPNGQIVATASDDGTAK----LWNLQGGKIATFKHNKEVNDV--AFSPDGKTVGTASW 668

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D   +  +   +    +    + N         FS +GK   I+   D  + ++  +LQ 
Sbjct: 669 DTAKLWNLQGGEIATLQYDSLVQNI-------VFSPDGKNVAIA-SYDSDVKLW--NLQG 718

Query: 292 NAT-----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                    ++T  L +  +  +SPD   +   S R+   +L+     G +        +
Sbjct: 719 KEIATIIHNKMTKYLSVVNNLFFSPDGKVVATTSRRDATTKLW--NLQGKEIATFKYYPD 776

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
               + V+SP G ++A          + +    G+    L  +  ++   +SP G ++  
Sbjct: 777 IGIKNSVFSPNGKVVAIYSDDKT---VNLYNLQGNTIATLKHNDKVEDIVFSPDGNTVAT 833

Query: 407 SRKKDGDTGSKLYSIDLN 424
                 D    L+++  N
Sbjct: 834 VSSYVHDGTVNLWNLKGN 851



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 107/322 (33%), Gaps = 39/322 (12%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG----EKGDFNSRILFVSESVVSGIIK 190
           D K +    + S    W      I+  I+  +T         F S    V  +       
Sbjct: 698 DGKNVAIASYDSDVKLWNLQGKEIATIIHNKMTKYLSVVNNLFFSPDGKVVATTSRRDAT 757

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L  +   G  I       D  +    FSPN + VA  + D      V L + + +   
Sbjct: 758 TKLWNLQ--GKEIATFKYYPDIGIKNSVFSPNGKVVAIYSDDK----TVNLYNLQGNTIA 811

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSV--DLQSNATERLTNTLFINIS 306
               N +   +   FS +G           D  ++++++  ++      +    LF +IS
Sbjct: 812 TLKHNDKVEDI--VFSPDGNTVATVSSYVHDGTVNLWNLKGNIIGTFKHQ---GLFQDIS 866

Query: 307 -ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              +SPD   I   +  +    L+     G      +    +   +  +SP G  I    
Sbjct: 867 RLEFSPDGQTIA-TALLDNTAHLW--NLQGKKIAIFTH--YSQVLNLAFSPDGRTITTAS 921

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT------GSKLY 419
             G      +    G   R+L  +  +    +SP G+++  +   DG          ++ 
Sbjct: 922 SDGTA---KLWNLQGGNIRILKHNDQINNIVFSPDGKTVA-TTSYDGTAKLWNLQKGEIV 977

Query: 420 SIDLNGRNETLINTPAYASDPQ 441
           ++  +G    ++N   ++ D +
Sbjct: 978 TLKHDG----VVNDAVFSPDGK 995



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 93/244 (38%), Gaps = 23/244 (9%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + +  G NIR +    DQI     FSP+ + VA  +YD        L + +         
Sbjct: 928  LWNLQGGNIR-ILKHNDQIN-NIVFSPDGKTVATTSYDG----TAKLWNLQKGEIVTL-- 979

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                ++    FS +GK    +   D+ + ++  +LQ      L +    +    +SPDS+
Sbjct: 980  KHDGVVNDAVFSPDGKTIATTTSSDKTVKLW--NLQGQLIATLKHKYEPDKEVVFSPDSN 1037

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             I   SD   K    +    G     ++   E    + +++P G  +  T +   K    
Sbjct: 1038 IIA-TSDDTAK----LWNLQGQLIATLT--NEGGVREVIFNPDGKSVLTTSYENAK---- 1086

Query: 375  VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-KKDGDTGSKLYSIDLNGRNETLINT 433
            +   +G QE    +  +L    +SP G ++  +   +D D    +   +L G     +  
Sbjct: 1087 LWNLEG-QEIATFKHKHLGEVVFSPDGHTVATASVYRDSDISGSVKLWNLKGEEIITLQH 1145

Query: 434  PAYA 437
             +++
Sbjct: 1146 GSFS 1149



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 63/156 (40%), Gaps = 12/156 (7%)

Query: 164  QSITGEKGDFNSRILFVSESVVSG--IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            + IT + G F+  +       ++    + N+  + +  G  I  LT   D  +    FSP
Sbjct: 1139 EIITLQHGSFSDVLFSPDGKTIATVSTLSNTAKLWNLQGREIATLTH--DGWINHISFSP 1196

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + + +   + D      V L + R         N  +++  P FS +GK    +V  D  
Sbjct: 1197 DGKTIGIRSGDK----TVKLWNLRGQEIATLKHNSSTIVSDPIFSPDGKTIA-TVSLDRT 1251

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            + +++ +++  + ++        +   +SPD+  I 
Sbjct: 1252 VRLWT-EVRDGSWQQFAEYQSRRV--VFSPDNKLIA 1284



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 6/87 (6%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                ++ + +  G  I  L  +   I+ +P FSP+ + +A  + D      V L     D
Sbjct: 1205 SGDKTVKLWNLRGQEIATLKHNSSTIVSDPIFSPDGKTIATVSLDR----TVRLWTEVRD 1260

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALI 274
             + ++   ++S  +   FS + K   I
Sbjct: 1261 GSWQQFAEYQSRRV--VFSPDNKLIAI 1285


>gi|333031177|ref|ZP_08459238.1| putative exported aminopeptidase [Bacteroides coprosuis DSM 18011]
 gi|332741774|gb|EGJ72256.1| putative exported aminopeptidase [Bacteroides coprosuis DSM 18011]
          Length = 694

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 58/314 (18%), Positives = 113/314 (35%), Gaps = 64/314 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--- 231
           S+I F+S    S    + L  M+ DG   + L+   + I     FSP+++KV   +    
Sbjct: 114 SKIAFISSESGS----SQLWEMNADGTEKKQLSNVENGIEGF-SFSPDEKKVVLISTVKV 168

Query: 232 ----------------------------------------DDEDILRVYLMDTRIDRAPK 251
                                                   D      + L D       +
Sbjct: 169 GETTADKHPDLPKATGKVINDLMYKHWDEWVTDAPHPFVGDFNGSEIINLTDIMQGEPYE 228

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTL-F 302
                   I    +++ G +   + +K            DIY  DL++N T  +T  +  
Sbjct: 229 SPLRPFGGIEQIAWNTTGDKIAYTSRKKTGKEYAISTNSDIYVYDLKNNTTTNITEGMMG 288

Query: 303 INISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + +  YSPD   I + S +R+G    + +L+VM     +++ +S+D E++  D  WS  
Sbjct: 289 YDTNPQYSPDGKYISWLSMERDGYEADQNRLFVMDLASGEKRFMSKDFESNVDDYTWSSD 348

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              I F         +  +  + ++   + E  +  A T +  G  LI  ++    +  +
Sbjct: 349 SKSIYFIGVWHATSQMYAIDVEQAKVSQITEGMHDYA-TIALCGEGLI-GKRHSLSSADE 406

Query: 418 LYSIDLNGRNETLI 431
           ++S+ L+G    + 
Sbjct: 407 IFSVSLDGAQTQVT 420



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 98/288 (34%), Gaps = 65/288 (22%)

Query: 220 SPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ +++AY+         +    +++++T      K+I +      +P++   G +   
Sbjct: 60  SPDAKQLAYSVSYYSVPLDKSNSELFVINTDGTNN-KQITSTPFSEGSPKWIKEGSKIAF 118

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------------- 321
              +  +  ++ ++      ++L+N        S+SPD  ++V  S              
Sbjct: 119 ISSESGSSQLWEMNADGTEKKQLSNVENGIEGFSFSPDEKKVVLISTVKVGETTADKHPD 178

Query: 322 ---REGK-----------------EQLYVMQSNGSDQKRISQ-----------DKEASYF 350
                GK                    +V   NGS+   ++                   
Sbjct: 179 LPKATGKVINDLMYKHWDEWVTDAPHPFVGDFNGSEIINLTDIMQGEPYESPLRPFGGIE 238

Query: 351 DPVWSPQGDLIAFTKF--SGEKF------AIGVMKKDGSQERLLVED--SNLQAPTWSPS 400
              W+  GD IA+T    +G+++       I V     +    + E        P +SP 
Sbjct: 239 QIAWNTTGDKIAYTSRKKTGKEYAISTNSDIYVYDLKNNTTTNITEGMMGYDTNPQYSPD 298

Query: 401 GRSLIFSR-KKDGDTGSK--LYSIDLNGRNETLINTP--AYASDPQWV 443
           G+ + +   ++DG    +  L+ +DL    +  ++    +   D  W 
Sbjct: 299 GKYISWLSMERDGYEADQNRLFVMDLASGEKRFMSKDFESNVDDYTWS 346



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 83/247 (33%), Gaps = 61/247 (24%)

Query: 258 SMILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I +   S + K+   SV            +++ ++      +++T+T F   S  +  
Sbjct: 52  GRIGSFDVSPDAKQLAYSVSYYSVPLDKSNSELFVINTDGTNNKQITSTPFSEGSPKWIK 111

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------ 365
           + S+I F S   G  QL+ M ++G+++K++S  +        +SP    +          
Sbjct: 112 EGSKIAFISSESGSSQLWEMNADGTEKKQLSNVENGIEGF-SFSPDEKKVVLISTVKVGE 170

Query: 366 ---------------------------FSGEKFAIGVMKKDGSQERLLVE---DSNLQAP 395
                                      +  +     V   +GS+   L +       ++P
Sbjct: 171 TTADKHPDLPKATGKVINDLMYKHWDEWVTDAPHPFVGDFNGSEIINLTDIMQGEPYESP 230

Query: 396 ----------TWSPSGRSLIFSRKKDGD------TGSKLYSIDLNGRNETLINTP--AYA 437
                      W+ +G  + ++ +K         T S +Y  DL     T I      Y 
Sbjct: 231 LRPFGGIEQIAWNTTGDKIAYTSRKKTGKEYAISTNSDIYVYDLKNNTTTNITEGMMGYD 290

Query: 438 SDPQWVG 444
           ++PQ+  
Sbjct: 291 TNPQYSP 297


>gi|68349584|gb|AAY96687.1| protein kinase/protein beta WD-40 repeat [uncultured bacterium
           BAC10-4]
          Length = 940

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 78/225 (34%), Gaps = 9/225 (4%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           + YA      +    L+        ++       +   R S +G R  ++ +    + + 
Sbjct: 626 LVYAPVPPGSLRSSTLVWVDRHGTVEQAATVPFAVPQFRLSPDGGRIAVTGRDGGRVYVD 685

Query: 286 SVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQ 343
             DL   A  R  +  +    +  +S D  +++F     G+ +++    +GS   +RI  
Sbjct: 686 LYDLSRKAATRFMDRDVDYPTTPVFSVDGRRLLFGRWDTGRSEIWSQPVDGSAAPERILT 745

Query: 344 DKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQE---RLLVEDSNLQ-APTWS 398
                      S  G    F+ F+      + V   +   E   R  V  ++ + +  ++
Sbjct: 746 VPGIWLSPSSVSHDGRFATFSVFAMNSSHDVWVADLEARAEPRARPFVATADNEFSAAFA 805

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           P GR++ ++  + GD    +       R   +       +  QW 
Sbjct: 806 PDGRAIAYTTNETGDENIYVRRFPEGDRKVRISVAGGQGA--QWS 848



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 49/225 (21%), Positives = 77/225 (34%), Gaps = 10/225 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R SP+  ++A    D   +  V L D     A + +         P FS +G+R L    
Sbjct: 664 RLSPDGGRIAVTGRDGGRVY-VDLYDLSRKAATRFMDRDVDYPTTPVFSVDGRRLLFGRW 722

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISAS-YSPDSSQIVFESD-REGKEQLYVMQSN 334
                +I+S  +  +A  ER+     I +S S  S D     F          ++V    
Sbjct: 723 DTGRSEIWSQPVDGSAAPERILTVPGIWLSPSSVSHDGRFATFSVFAMNSSHDVWVADLE 782

Query: 335 GSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
              + R         + F   ++P G  IA+T        I V +      ++ +  +  
Sbjct: 783 ARAEPRARPFVATADNEFSAAFAPDGRAIAYTTNETGDENIYVRRFPEGDRKVRISVAGG 842

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTP 434
           Q   WS  G  L F +  DG   + L   D     G    L   P
Sbjct: 843 QGAQWSRDGSEL-FYQSPDGKLMAVLVRKDGGLSFGEPHVLFEGP 886



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 66/177 (37%), Gaps = 9/177 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S + ++VAY T          +   R+D    R          P FS +G        
Sbjct: 395 AISRDGRQVAYVTGKGIGSAGRQIYLRRLDDLTVRAVPETEGAFNPFFSPDGTWLAF-FS 453

Query: 278 KDEAMDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            D  +    V L       L       I +  S+S D  +IVF++   G   L V+ + G
Sbjct: 454 ADGMLK--KVSLAGGRPVVLARDLPSSIWMLGSWSDDG-RIVFDTSNAG---LRVVSAAG 507

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                ++      + DP   P+ D++ +T  +  K  I  +  DG + + L+E ++ 
Sbjct: 508 GAVTTLTMASGEWHLDPQVLPEWDVVLYTVQAISKLRIEAISLDGKKRKTLLESASH 564



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 62/369 (16%), Positives = 119/369 (32%), Gaps = 85/369 (23%)

Query: 37  KVATNSANYS-PVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK------- 88
           ++       S P+ +A         +       ++  L+ + V+  +   S +       
Sbjct: 590 RLEITGPAVSVPLEVAVDHPNQSAPVPQ-----LAVSLEGTLVYAPVPPGSLRSSTLVWV 644

Query: 89  -------QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR------------ 129
                  Q  T P ++P+F+  +  G ++ VTGR       R+ V+              
Sbjct: 645 DRHGTVEQAATVPFAVPQFR-LSPDGGRIAVTGR----DGGRVYVDLYDLSRKAATRFMD 699

Query: 130 ---------LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL-- 178
                    ++ V  R+ + G+        W +     +    + I    G + S     
Sbjct: 700 RDVDYPTTPVFSVDGRRLLFGRWDTGRSEIWSQPVDGSAAP--ERILTVPGIWLSPSSVS 757

Query: 179 ----FVSESVVSGIIKNSLCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATYD 232
               F + SV +    + + V D +        P  +     F   F+P+ + +AY T +
Sbjct: 758 HDGRFATFSVFAMNSSHDVWVADLEARAEPRARPFVATADNEFSAAFAPDGRAIAYTTNE 817

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS----------SNGKRALISVQKDEAM 282
             D   +Y+          RI          ++S           +GK   + V+KD   
Sbjct: 818 TGDE-NIYVRRFPEGDRKVRISVAGGQ--GAQWSRDGSELFYQSPDGKLMAVLVRKDGG- 873

Query: 283 DIYSVDLQSNATERLTNTL---FINISASY--SPDSSQIVFESDREGKE----QLYVMQS 333
                 L       L        I+I  SY  SPDS + +             +L V+Q+
Sbjct: 874 ------LSFGEPHVLFEGPYLTSIDIGPSYAVSPDSRRFLMARQSNVYPLRATELVVVQN 927

Query: 334 NGSDQKRIS 342
              D +R++
Sbjct: 928 WFEDVRRLT 936



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 60/149 (40%), Gaps = 19/149 (12%)

Query: 301 LFINISASYSPDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            F  ++ + S D  Q+ + + +       Q+Y+ + +    + + + + A  F+P +SP 
Sbjct: 388 SFPELNLAISRDGRQVAYVTGKGIGSAGRQIYLRRLDDLTVRAVPETEGA--FNPFFSPD 445

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDT 414
           G  +AF    G    +  +   G +  +L  D   S     +WS  GR ++F     G  
Sbjct: 446 GTWLAFFSADG---MLKKVSLAGGRPVVLARDLPSSIWMLGSWSDDGR-IVFDTSNAG-- 499

Query: 415 GSKLYSIDLNGRNETLINTPA--YASDPQ 441
              L  +   G   T +   +  +  DPQ
Sbjct: 500 ---LRVVSAAGGAVTTLTMASGEWHLDPQ 525



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 66/176 (37%), Gaps = 11/176 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           ++ +V+   + G     + +   D   +R +  +     F P FSP+   +A+ + D   
Sbjct: 402 QVAYVTGKGI-GSAGRQIYLRRLDDLTVRAVPETEG--AFNPFFSPDGTWLAFFSAD-GM 457

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           + +V L   R     + + +  S+ +   +S +G R +          +  V     A  
Sbjct: 458 LKKVSLAGGRPVVLARDLPS--SIWMLGSWSDDG-RIVFDTSNAG---LRVVSAAGGAVT 511

Query: 296 RLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            LT      ++     P+   +++      K ++  +  +G  +K + +    + +
Sbjct: 512 TLTMASGEWHLDPQVLPEWDVVLYTVQAISKLRIEAISLDGKKRKTLLESASHARY 567


>gi|268315902|ref|YP_003289621.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Rhodothermus marinus DSM 4252]
 gi|262333436|gb|ACY47233.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Rhodothermus marinus DSM 4252]
          Length = 800

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 76/209 (36%), Gaps = 31/209 (14%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERL--------TNTLFINISAS- 308
              P +S +G+ A++ V+  +  D + V  + ++     L             I+     
Sbjct: 339 AYGPYWSGDGRYAVLEVRARDNKDRWIVRLNPETGRLTVLDRQHDEAWIAGPGISWFGGR 398

Query: 309 ----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + PD+    F+S+R G   LYV+       ++++ D     FDP  S  G    FT
Sbjct: 399 STMGWLPDNRHFYFQSERTGYSHLYVVDVETGRIRQLT-DGAFEVFDPFISRDGRYWYFT 457

Query: 365 KFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYS 420
              G  F      M  DG     L   +       SP  +   +++S     +   ++Y 
Sbjct: 458 SSEGSPFERHFYRMPIDGGPRERLTTLTGRNDVVLSPDEQVMGILYSYS---NRPPEIYL 514

Query: 421 IDLN----GRNETLINTPAYASDPQWVGF 445
             L     G  + + ++P      +W+ +
Sbjct: 515 QPLRRGRPGEPQRITHSPTD----EWLAY 539



 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/220 (13%), Positives = 64/220 (29%), Gaps = 25/220 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQ--------------KVAYATYDDEDILRVYLMDTR 245
           G         R    + P +S + +               +     +   +  +      
Sbjct: 325 GVEPDSQKTKRFLYAYGPYWSGDGRYAVLEVRARDNKDRWIVRLNPETGRLTVLDRQHDE 384

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              A   I  F        +  + +      ++     +Y VD+++    +LT+  F   
Sbjct: 385 AWIAGPGISWFGGRSTM-GWLPDNRHFYFQSERTGYSHLYVVDVETGRIRQLTDGAFEVF 443

Query: 306 SASYSPDSSQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI- 361
               S D     F S  EG       Y M  +G  ++R++     +  D V SP   ++ 
Sbjct: 444 DPFISRDGRYWYFTSS-EGSPFERHFYRMPIDGGPRERLTTLTGRN--DVVLSPDEQVMG 500

Query: 362 AFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWS 398
               +S     I +         + + +      +   +S
Sbjct: 501 ILYSYSNRPPEIYLQPLRRGRPGEPQRITHSPTDEWLAYS 540



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 50/145 (34%), Gaps = 23/145 (15%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNG----- 269
            P +S + Q + +            L    R   AP+++       L P F  +G     
Sbjct: 43  NPFWSEDGQYLYFWWNPKGQFPSDSLYRVSRSGGAPEKVAPEERRNLPPAF--DGWHHGE 100

Query: 270 -------KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
                  +R + +  +D   D+Y  D  +    RLT T     +  ++PD   +VF  + 
Sbjct: 101 WVYDADFRRKVFA--RDG--DLYLYDRTTRRLTRLTRTAERESNPRFTPDGQAVVFVKE- 155

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEA 347
                L+ +        +++  +  
Sbjct: 156 ---NNLFQLDLRTGALTQLTDLRRG 177



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 61/154 (39%), Gaps = 17/154 (11%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASY--FDP 352
           T       +  +S D   + F  + +G    + LY +  +G   ++++ ++  +      
Sbjct: 35  TWIGDWPDNPFWSEDGQYLYFWWNPKGQFPSDSLYRVSRSGGAPEKVAPEERRNLPPAFD 94

Query: 353 VWSPQGDLIAFTKFSGEKF----AIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFS 407
            W   G+ +    F  + F     + +  +   +   L   +  ++ P ++P G++++F 
Sbjct: 95  GWH-HGEWVYDADFRRKVFARDGDLYLYDRTTRRLTRLTRTAERESNPRFTPDGQAVVFV 153

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           ++      + L+ +DL     T +       +P+
Sbjct: 154 KE------NNLFQLDLRTGALTQLTDLRRGQEPR 181


>gi|37519843|ref|NP_923220.1| hypothetical protein gll0274 [Gloeobacter violaceus PCC 7421]
 gi|35210834|dbj|BAC88215.1| gll0274 [Gloeobacter violaceus PCC 7421]
          Length = 615

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 91/268 (33%), Gaps = 16/268 (5%)

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYL 206
           P   R      +D I  +    K    +   FV      G   + L   D  DG     L
Sbjct: 54  PGGDRSQQTFFADRIQGASYPPKP---TGEFFVFAKDTGGNEFSQLYRYDPADGT--VNL 108

Query: 207 TPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-R 264
                       +S   +++AY +   +     +YL+D    ++ +++            
Sbjct: 109 LTDGKSRNTGATWSHTGRQIAYTSTRRNGKDTDIYLVDPLKAQSDRKLAAVEGGGWGVLD 168

Query: 265 FSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFIN----ISASYSPDSSQIVFE 319
           +S + K+ L+          ++  D  +     +T           +A ++ D   I   
Sbjct: 169 WSPDDKKLLVLEYVSINESYLWLFDAATGEKNLITPKGGTEKVSYGAAQFAADGRGIYLT 228

Query: 320 SDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           SDR+ + ++L  +   G+  K +S            SP G L+AF         + +++ 
Sbjct: 229 SDRDSEFQRLQYLDPAGNTTKILSGGIPWDIESFELSPDGRLLAFVANEDGIAKLHLLET 288

Query: 379 DGSQERLLVED--SNLQAPTWSPSGRSL 404
              +ER + +     + +  W P  R L
Sbjct: 289 ATGKERPVPKLPVGLIGSLEWRPDSREL 316



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 99/283 (34%), Gaps = 19/283 (6%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +++ T      + R + +          + + +   D +   +         + P+  P 
Sbjct: 21  FRTATLAGWHPSKREMLILTRFSDTNQVHRVQIPGGDRSQQTFFADRIQGASYPPK--PT 78

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DE 280
            +   +A     +           D     + + +S      +S  G++   +  +   +
Sbjct: 79  GEFFVFAKDTGGNEFSQLYRYDPADGTVNLLTDGKSRNTGATWSHTGRQIAYTSTRRNGK 138

Query: 281 AMDIYSVD-LQSNATERLTNTLFINIS-ASYSPDSSQIV---FESDREGKEQLYVMQSNG 335
             DIY VD L++ +  +L            +SPD  +++   + S  E    L++  +  
Sbjct: 139 DTDIYLVDPLKAQSDRKLAAVEGGGWGVLDWSPDDKKLLVLEYVSINE--SYLWLFDAAT 196

Query: 336 SDQKRISQDKEA---SYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSN 391
            ++  I+        SY    ++  G  I  T     +F  +  +   G+  ++L     
Sbjct: 197 GEKNLITPKGGTEKVSYGAAQFAADGRGIYLTSDRDSEFQRLQYLDPAGNTTKILSGGIP 256

Query: 392 LQAPTW--SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
               ++  SP GR L F   +DG   +KL+ ++     E  + 
Sbjct: 257 WDIESFELSPDGRLLAFVANEDG--IAKLHLLETATGKERPVP 297



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 78/229 (34%), Gaps = 16/229 (6%)

Query: 219 FSPNQQKVAYATY--DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           + P+++++   T   D   + RV +      +        +     P+    G+  + + 
Sbjct: 29  WHPSKREMLILTRFSDTNQVHRVQIPGGDRSQQTFFADRIQGASYPPK--PTGEFFVFAK 86

Query: 277 QKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQ 332
                    +Y  D        LT+    N  A++S    QI + S R       +Y++ 
Sbjct: 87  DTGGNEFSQLYRYDPADGTVNLLTDGKSRNTGATWSHTGRQIAYTSTRRNGKDTDIYLVD 146

Query: 333 SNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDS 390
              +   R ++  +   +    WSP    +   ++    +  + +      ++ L+    
Sbjct: 147 PLKAQSDRKLAAVEGGGWGVLDWSPDDKKLLVLEYVSINESYLWLFDAATGEKNLITPKG 206

Query: 391 NLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +  +     ++  GR +  +  +D +     Y +D  G    +++  
Sbjct: 207 GTEKVSYGAAQFAADGRGIYLTSDRDSEFQRLQY-LDPAGNTTKILSGG 254



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 64/151 (42%), Gaps = 5/151 (3%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRA---PKRIGNFRSMILAPRFSSNGKRALIS 275
           +SP+ +K+    Y   +   ++L D           + G  +    A +F+++G+   ++
Sbjct: 169 WSPDDKKLLVLEYVSINESYLWLFDAATGEKNLITPKGGTEKVSYGAAQFAADGRGIYLT 228

Query: 276 VQKDEAMD-IYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQS 333
             +D     +  +D   N T+ L+  +  +I +   SPD   + F ++ +G  +L+++++
Sbjct: 229 SDRDSEFQRLQYLDPAGNTTKILSGGIPWDIESFELSPDGRLLAFVANEDGIAKLHLLET 288

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               ++ + +          W P    +  T
Sbjct: 289 ATGKERPVPKLPVGLIGSLEWRPDSRELGMT 319



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/166 (10%), Positives = 53/166 (31%), Gaps = 5/166 (3%)

Query: 190 KNSLCVMDRDGA--NIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILRVYLMDTRI 246
           ++ L + D      N+       +++ +    F+ + + +   +  D +  R+  +D   
Sbjct: 186 ESYLWLFDAATGEKNLITPKGGTEKVSYGAAQFAADGRGIYLTSDRDSEFQRLQYLDPAG 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINI 305
           +      G     I +   S +G+       +D    ++ ++  +     +      +  
Sbjct: 246 NTTKILSGGIPWDIESFELSPDGRLLAFVANEDGIAKLHLLETATGKERPVPKLPVGLIG 305

Query: 306 SASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYF 350
           S  + PDS ++            ++          R ++ +     
Sbjct: 306 SLEWRPDSRELGMTLTAARSPADVFSWNVATGKVDRWTRSETGGLN 351


>gi|126658553|ref|ZP_01729700.1| Peptidase C14, caspase catalytic subunit p20 [Cyanothece sp. CCY0110]
 gi|126620140|gb|EAZ90862.1| Peptidase C14, caspase catalytic subunit p20 [Cyanothece sp. CCY0110]
          Length = 1523

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 53/337 (15%), Positives = 122/337 (36%), Gaps = 44/337 (13%)

Query: 86   SFKQKITNPDSIPRFQ---DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
            +  + +       +F    DW  +       G+++  G     +  +LW+++  + I  +
Sbjct: 866  ALIRTVYEGSEKNQFHCNCDW-VMNIDFHPNGQILASGGGDGTI--KLWNLETGELI--R 920

Query: 143  KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
                   +               I+    + NS+IL       S I  N + + + +   
Sbjct: 921  TLKGQNDT---------------ISSISFNGNSKIL-----ASSSINHNIIEIWNLETGK 960

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +       ++ +    FS + + +A  + D+     + L D +       +      I +
Sbjct: 961  VIRTLKEHNEGVQSVSFSFDGKTLASGSNDN----TIKLWDVKTGEVIHTLKGHNEPISS 1016

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT----NTLFINISASYSPDSSQIVF 318
              FS NGK  L S   D  + ++  +L++    R T    N      S S+SP+   +  
Sbjct: 1017 VSFSPNGK-ILASGSDDNTVKLW--NLETGELIR-TLKGHNDSGFVTSLSFSPNGQLLAS 1072

Query: 319  ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             S+      + +         +  +++E + +   +SP G  +A    S +   + +   
Sbjct: 1073 GSNGSKNGSIILWNIKTGQIIKNLENREVTIWSVSFSPDGKSLASGSGSDDN-TVKLWDI 1131

Query: 379  DGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGD 413
            +  +    ++  N   ++ ++SP  ++L  S   DG 
Sbjct: 1132 ETGELIRTLKGHNDRVRSVSFSPDSKTLA-SSSDDGR 1167



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 92/271 (33%), Gaps = 25/271 (9%)

Query: 156  HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
            H   D +        G              SG    ++ + + +   +      ++  + 
Sbjct: 881  HCNCDWVMNIDFHPNGQIL----------ASGGGDGTIKLWNLETGELIRTLKGQNDTIS 930

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               F+ N + +A ++ +      + + +    +  + +      + +  FS +GK    S
Sbjct: 931  SISFNGNSKILASSSINHN---IIEIWNLETGKVIRTLKEHNEGVQSVSFSFDGKTLA-S 986

Query: 276  VQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               D  + ++  D+++      L        S S+SP+   +   SD      + +    
Sbjct: 987  GSNDNTIKLW--DVKTGEVIHTLKGHNEPISSVSFSPNGKILASGSD---DNTVKLWNLE 1041

Query: 335  GSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-- 390
              +  R  +            +SP G L+A      +  +I +      Q    +E+   
Sbjct: 1042 TGELIRTLKGHNDSGFVTSLSFSPNGQLLASGSNGSKNGSIILWNIKTGQIIKNLENREV 1101

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             + + ++SP G+SL  S     D   KL+ I
Sbjct: 1102 TIWSVSFSPDGKSLA-SGSGSDDNTVKLWDI 1131



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 45/331 (13%), Positives = 107/331 (32%), Gaps = 60/331 (18%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ +  G        +LWD++  + I  +         R +  + S D            
Sbjct: 1112 GKSLASGSGSDDNTVKLWDIETGELI--RTLKGHNDRVRSV--SFSPD------------ 1155

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                   S+++ S      +   +        +T + D  ++   F P+ + +A      
Sbjct: 1156 -------SKTLASSSDDGRIQFWNVQLRQPVSITKAHDNGVYSVSFHPDGKILA----SG 1204

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-------- 285
                 + L D           +    +    F+ +GK  L S   D  + ++        
Sbjct: 1205 GRDGTIKLWDVEKGEIIHTFNHDNGSVWNIIFNPDGK-ILASSGDDGTIKLWDVKRTELL 1263

Query: 286  -SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             +++  +    R+          ++SP+   +    D      + +              
Sbjct: 1264 NTLNHHTGLVRRI----------NFSPEGKILASGGD---DGTIKLWDVEKGQLIHTLNP 1310

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
               +     +SP G L+A +  + +   I  ++     E L+  D+ +Q+ ++SP  + L
Sbjct: 1311 YNEAIVSISFSPNGKLLAASGINSKTIKIWNLQTQKYLEPLVGHDTAIQSLSFSPDNKIL 1370

Query: 405  I----------FSRKKDGDTGSKLYSIDLNG 425
                       +   K  ++ ++++SI   G
Sbjct: 1371 ASGSDQGIIKLWKSNKKQESFTEIFSITTYG 1401


>gi|329891011|ref|ZP_08269354.1| prolyl oligopeptidase family protein [Brevundimonas diminuta ATCC
           11568]
 gi|328846312|gb|EGF95876.1| prolyl oligopeptidase family protein [Brevundimonas diminuta ATCC
           11568]
          Length = 698

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 90/290 (31%), Gaps = 66/290 (22%)

Query: 216 EPRFSPNQQKVAYA-----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +PR SP+ ++V YA        + ++  ++++D     AP+R+      +   R++ +G+
Sbjct: 60  DPRVSPDGRRVIYAVTRTDWEGNRNLTGLWMVDVDGATAPRRLPISEGGVSGARWAPDGQ 119

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-------------- 316
                  +  +  ++  D +  A  ++T          ++PD   +              
Sbjct: 120 SIYFLSPRGGSNQVWRTDREGMAAAQVTTLPVSLSGFRFTPDGKALVLGVSVYTDCETLD 179

Query: 317 -----------------------VFESDREGKE-QLYVMQSNG-----SDQKRISQDKEA 347
                                  VF+   +G++  +++   NG        + ++   + 
Sbjct: 180 CTKDRLAERAKSTQQVYDRMPLRVFDRWADGRQSHIFLQPLNGSGFAEGQPRDLTAGLDG 239

Query: 348 SYFDP----VWSPQGDLIAFTKFS-------GEKFAIGVMKKDGSQERLLVED--SNLQA 394
                      +  G    +                +  +  DG     L E       A
Sbjct: 240 DVSVGEGGLTIARDGRAFIYAARKQADRAAFTNDSDLYRLSLDGGAPVNLTEGHSGPDGA 299

Query: 395 PTWSPSGRSLIFS---RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           P  SP GR L +    R+  G     +   D NG N   +    +   P 
Sbjct: 300 PALSPDGRRLAWLAAPRENVGGDQPVVMVADANGANARALTN--WDRGPS 347



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/338 (15%), Positives = 98/338 (28%), Gaps = 74/338 (21%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
               D    I  V+ +   G    + L ++D DGA      P  +  +   R++P+ Q +
Sbjct: 62  RVSPDGRRVIYAVTRTDWEGNRNLTGLWMVDVDGATAPRRLPISEGGVSGARWAPDGQSI 121

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-------------- 272
            + +              R   A  ++      +   RF+ +GK                
Sbjct: 122 YFLS--PRGGSNQVWRTDREGMAAAQVTTLPVSLSGFRFTPDGKALVLGVSVYTDCETLD 179

Query: 273 -----------------------LISVQKDEAM-DIYSVDLQS-----NATERLTNTLFI 303
                                  +     D     I+   L            LT  L  
Sbjct: 180 CTKDRLAERAKSTQQVYDRMPLRVFDRWADGRQSHIFLQPLNGSGFAEGQPRDLTAGLDG 239

Query: 304 NIS-----ASYSPDSS-----------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           ++S      + + D             +  F +D +    LY +  +G     +++    
Sbjct: 240 DVSVGEGGLTIARDGRAFIYAARKQADRAAFTNDSD----LYRLSLDGGAPVNLTEGHSG 295

Query: 348 SYFDPVWSPQGDLIAFT-----KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSG 401
               P  SP G  +A+         G++  + V   +G+  R L   D      TW   G
Sbjct: 296 PDGAPALSPDGRRLAWLAAPRENVGGDQPVVMVADANGANARALTNWDRGPSGLTWRSDG 355

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           R+L  +   +G    +L+ ID        +       D
Sbjct: 356 RALYVTAADEGQN--RLFEIDARTGAVKALTDIGSVGD 391



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 78/243 (32%), Gaps = 62/243 (25%)

Query: 260 ILAPRFSSNGKRALISVQKDEA------MDIYSVDLQS-NATERLTNTLFINISASYSPD 312
           +  PR S +G+R + +V + +         ++ VD+    A  RL  +      A ++PD
Sbjct: 58  VGDPRVSPDGRRVIYAVTRTDWEGNRNLTGLWMVDVDGATAPRRLPISEGGVSGARWAPD 117

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI----------- 361
              I F S R G  Q++     G    +++     S     ++P G  +           
Sbjct: 118 GQSIYFLSPRGGSNQVWRTDREGMAAAQVTTL-PVSLSGFRFTPDGKALVLGVSVYTDCE 176

Query: 362 --------------------------AFTKF-SGEKFAIGVMKKDG-----SQERLLVED 389
                                      F ++  G +  I +   +G      Q R L   
Sbjct: 177 TLDCTKDRLAERAKSTQQVYDRMPLRVFDRWADGRQSHIFLQPLNGSGFAEGQPRDLTAG 236

Query: 390 SNLQAP------TWSPSGRSLIFSRKKDGDTG-----SKLYSIDLNGRNETLINTPAYAS 438
            +          T +  GR+ I++ +K  D       S LY + L+G     +       
Sbjct: 237 LDGDVSVGEGGLTIARDGRAFIYAARKQADRAAFTNDSDLYRLSLDGGAPVNLTEGHSGP 296

Query: 439 DPQ 441
           D  
Sbjct: 297 DGA 299



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 71/194 (36%), Gaps = 7/194 (3%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDTRI 246
            + L  +  DG     LT         P  SP+ +++A+     E++     V ++    
Sbjct: 273 DSDLYRLSLDGGAPVNLTEGHSGPDGAPALSPDGRRLAWLAAPRENVGGDQPVVMVADAN 332

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + + N+        + S+G+   ++   +    ++ +D ++ A + LT+   +   
Sbjct: 333 GANARALTNWDRGPSGLTWRSDGRALYVTAADEGQNRLFEIDARTGAVKALTDIGSVGD- 391

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +      + +  +         +  NG   ++++Q   A     +  P+ + I F  +
Sbjct: 392 --FDEVGGVLAYAHESFTAPTQVFIARNGQAARQVTQ-HNAELLARIDLPRPEEIRFPGW 448

Query: 367 SGEKFAIGVMKKDG 380
           + E     V K  G
Sbjct: 449 NDETAHGWVFKPAG 462



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 25/122 (20%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----TKFSGEKF--AI 373
           SDR G + L +M+  G               DP  SP G  + +    T + G +    +
Sbjct: 44  SDRLGLKDLAMMERVG---------------DPRVSPDGRRVIYAVTRTDWEGNRNLTGL 88

Query: 374 GVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            ++  DG+    RL + +  +    W+P G+S+ F   + G    +++  D  G     +
Sbjct: 89  WMVDVDGATAPRRLPISEGGVSGARWAPDGQSIYFLSPRGGSN--QVWRTDREGMAAAQV 146

Query: 432 NT 433
            T
Sbjct: 147 TT 148



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 6/60 (10%)

Query: 391 NLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRN--ETLINTPAYASDPQWVG 444
            +  P  SP GR +I++  +         + L+ +D++G      L  +    S  +W  
Sbjct: 57  RVGDPRVSPDGRRVIYAVTRTDWEGNRNLTGLWMVDVDGATAPRRLPISEGGVSGARWAP 116


>gi|298244841|ref|ZP_06968647.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
            44963]
 gi|297552322|gb|EFH86187.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
            44963]
          Length = 1251

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 57/367 (15%), Positives = 115/367 (31%), Gaps = 56/367 (15%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDR---KQIIGKKFFSSPASWR----KIAHTISDDIY--- 163
            GR++  G        +LWD +     +QI  +        W     ++A   +D      
Sbjct: 707  GRLLTSGGG--DARIQLWDTQSGTVIQQITNQGGTVCWLDWSPDGTQLATGCADGNIWLW 764

Query: 164  --------QSITGEKGD--FNSRILFVSESVVSGIIKNSLCVMDRDGANIR--YLTPSRD 211
                      +    G   + + + F    +          V   D   +          
Sbjct: 765  QPGVSEPENHVHQLSGHTHWVTGLAFAPNGIQLASASFDGTVKLWDLERLECIQTFSGHT 824

Query: 212  QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              +    +SP+ + VA A +D      ++L DT+  RA   +    + I +  F+ + + 
Sbjct: 825  DRVIRVVWSPDGRTVASAGFDK----TIWLWDTQEQRARAVLREHTAAIFSLAFTPDSRT 880

Query: 272  ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             L S   D  +  + V+ +      +   +       ++PD  Q+ F +  +    ++  
Sbjct: 881  LL-SGSSDGTIRAWDVE-RGQCLHVIGGYVASLYDVDWNPDGKQL-FTAGADTLVTIW-- 935

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQE 383
                     I +    + F    SP G L+  T           G    + +++     +
Sbjct: 936  DRASGAPSGILRGHRWTVFGIAASPDGQLLVSTGHDNHMALWEVGNDVPLHLLRPPDGAD 995

Query: 384  RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE------TLINTPAYA 437
             +           WSP G  L       G   ++++ +    R         LI   A++
Sbjct: 996  TI------FYKVMWSPDGHFLACGTYMHG---AQVWDVTTLTRRWVAQASSNLIRDVAWS 1046

Query: 438  SDPQWVG 444
             D  WV 
Sbjct: 1047 PDGMWVA 1053



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/332 (13%), Positives = 106/332 (31%), Gaps = 41/332 (12%)

Query: 130 LWDVK----DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV- 184
           + DV       +      +      WR         +++          +     +  + 
Sbjct: 614 VIDVVAISPTGQYWAAAGYQGKVRLWRDAGR----VLHRVWQAHTNVIETLTFSPNGRLL 669

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG   +++ + D +   + +       +     F+P+ + +           R+ L DT
Sbjct: 670 VSGAWDDTIKLWDVESGKLLWTGVQHGNVNCV-TFTPDGRLLT----SGGGDARIQLWDT 724

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTNTLF 302
           +     ++I N    +    +S +G +   +   D  + ++   V    N   +L+    
Sbjct: 725 QSGTVIQQITNQGGTVCWLDWSPDGTQLA-TGCADGNIWLWQPGVSEPENHVHQLSGHTH 783

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                +++P+  Q+   S  +G  +L+       +  +            VWSP G  +A
Sbjct: 784 WVTGLAFAPNGIQLASASF-DGTVKLW--DLERLECIQTFSGHTDRVIRVVWSPDGRTVA 840

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKD--------- 411
              F      I +      + R ++    + + +  ++P  R+L+               
Sbjct: 841 SAGFDKT---IWLWDTQEQRARAVLREHTAAIFSLAFTPDSRTLLSGSSDGTIRAWDVER 897

Query: 412 -------GDTGSKLYSIDLNGRNETLINTPAY 436
                  G   + LY +D N   + L    A 
Sbjct: 898 GQCLHVIGGYVASLYDVDWNPDGKQLFTAGAD 929



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 88/283 (31%), Gaps = 45/283 (15%)

Query: 94   PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSS 147
            P  I R   W   G               +L V         LW+V +   +   +    
Sbjct: 942  PSGILRGHRWTVFGIAA--------SPDGQLLVSTGHDNHMALWEVGNDVPLHLLR---P 990

Query: 148  PASWRKIAHTISDDIYQSIT-GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
            P          +D I+  +     G F +   ++  +           V D      R++
Sbjct: 991  PDG--------ADTIFYKVMWSPDGHFLACGTYMHGA----------QVWDVTTLTRRWV 1032

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
              +   ++ +  +SP+   VA  + D    + ++       R  +R       I    +S
Sbjct: 1033 AQASSNLIRDVAWSPDGMWVAGGSDD--GSVSIWAAADGSQRLQRR---HAGAIFCVAWS 1087

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
             +G          E  ++   + QS    R L +   +  + ++SP    ++  +  +GK
Sbjct: 1088 LDGTWLACGGGGREGGEVLIYETQSGELLRTLVSHPGLVYAVAWSPGGDMLI-SAGSDGK 1146

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
              L   +       R+ +           SP G ++A     G
Sbjct: 1147 --LRWWEVASGQCVRVQEAHHGMVETLKVSPDGRMLASCGHDG 1187



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 70/200 (35%), Gaps = 12/200 (6%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               D I ++  +SP+   +A  TY      +V+ + T   R   +  +  ++I    +S 
Sbjct: 992  DGADTIFYKVMWSPDGHFLACGTYMHG--AQVWDVTTLTRRWVAQASS--NLIRDVAWSP 1047

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            +G         D ++ I++     +   +  +   I   A +S D + +          +
Sbjct: 1048 DGMWVA-GGSDDGSVSIWAA-ADGSQRLQRRHAGAIFCVA-WSLDGTWLACGGGGREGGE 1104

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERL 385
            + + ++   +  R         +   WSP GD++     +G    +   +    Q     
Sbjct: 1105 VLIYETQSGELLRTLVSHPGLVYAVAWSPGGDMLI---SAGSDGKLRWWEVASGQCVRVQ 1161

Query: 386  LVEDSNLQAPTWSPSGRSLI 405
                  ++    SP GR L 
Sbjct: 1162 EAHHGMVETLKVSPDGRMLA 1181


>gi|294012493|ref|YP_003545953.1| putative oligopeptidase [Sphingobium japonicum UT26S]
 gi|292675823|dbj|BAI97341.1| putative oligopeptidase [Sphingobium japonicum UT26S]
          Length = 685

 Score = 88.9 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 95/263 (36%), Gaps = 39/263 (14%)

Query: 214 LFEPRFSPNQQKVAYATY-----DDEDILRVYLMDTR-IDRAPKRIGNFRSMI-LAPRFS 266
           +  P  SP+ + +AY         +     +YL+D       P+ I +       AP FS
Sbjct: 40  VSAPAVSPDGKWLAYQLRVTDLAGNRGRTDLYLLDLGKAGATPRMIASAPDKNESAPAFS 99

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           ++GK       +     ++ V +   + E++T           S    ++   +DR    
Sbjct: 100 ADGKSLYYLSNRSGDDQLWRVAVAGGSAEQVTRAPGGISGFLLSATGDRVALWADRP--- 156

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +     + +    +        +D +++   D    T   G++  I VM   G +   +
Sbjct: 157 -VGAKTLDDTKPAALPSAGTGRVYDQLFARHWD----TWSDGQRSQIFVMPLSGGKAVSV 211

Query: 387 VEDSNLQAPT----------WSPSGRSLIFSRKKDGD-----TGSKLYSIDLNG------ 425
           +      +P+          WS  GR+L F+ ++ G      T   ++++  +G      
Sbjct: 212 MGALVGDSPSKPFGGAEEIAWSADGRTLFFALREAGRIEPLSTNLDIFAVPADGGAAPVN 271

Query: 426 ---RNETLINTPAYASDPQWVGF 445
               N+     PA + D +W+ +
Sbjct: 272 LTDANDATDTMPAVSPDGKWLAY 294



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 83/255 (32%), Gaps = 24/255 (9%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              G     L  + + GA  R +  + D+    P FS + + + Y +    D        
Sbjct: 63  GNRGRTDLYLLDLGKAGATPRMIASAPDKNESAPAFSADGKSLYYLSNRSGD--DQLWRV 120

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD------LQSNATERL 297
                + +++      I     S+ G R  +   +       ++D      L S  T R+
Sbjct: 121 AVAGGSAEQVTRAPGGISGFLLSATGDRVALWADRPVGAK--TLDDTKPAALPSAGTGRV 178

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + LF     ++S      +F     G + + VM +   D             +  WS  
Sbjct: 179 YDQLFARHWDTWSDGQRSQIFVMPLSGGKAVSVMGALVGDSP---SKPFGGAEEIAWSAD 235

Query: 358 GDLIAFTKFSGEKFA-------IGVMKKDGS-QERLLVE--DSNLQAPTWSPSGRSLIFS 407
           G  + F      +         I  +  DG      L +  D+    P  SP G+ L ++
Sbjct: 236 GRTLFFALREAGRIEPLSTNLDIFAVPADGGAAPVNLTDANDATDTMPAVSPDGKWLAYA 295

Query: 408 R-KKDGDTGSKLYSI 421
             K+ G    +L  +
Sbjct: 296 AMKRPGYESDRLVLM 310



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 66/202 (32%), Gaps = 18/202 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S + Q+             V +M   +  +P +            +S++G+    +++
Sbjct: 189 TWS-DGQRSQIFVMPLSGGKAVSVMGALVGDSPSKP---FGGAEEIAWSADGRTLFFALR 244

Query: 278 KDE-------AMDIYSVDLQSNA-TERLTN-TLFINISASYSPDSSQIVFES-DREGKEQ 327
           +          +DI++V     A    LT+     +   + SPD   + + +  R G E 
Sbjct: 245 EAGRIEPLSTNLDIFAVPADGGAAPVNLTDANDATDTMPAVSPDGKWLAYAAMKRPGYES 304

Query: 328 ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L +      + K ++ + + S     W   G  I  T        +  +     + 
Sbjct: 305 DRLVLMLRDIATGETKALTGNWDRSVASIAWEADGKGIIVTADDVLDHPVFRVDAASGKV 364

Query: 384 RLLVEDSNLQAPTWSPSGRSLI 405
             L +  +  +    P G  + 
Sbjct: 365 ARLTQAGHAGSVVPLPGGGFVY 386



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 5/113 (4%)

Query: 192 SLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRI 246
            +  +  DG A    LT + D     P  SP+ + +AYA         D L + L D   
Sbjct: 257 DIFAVPADGGAAPVNLTDANDATDTMPAVSPDGKWLAYAAMKRPGYESDRLVLMLRDIAT 316

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                  GN+   + +  + ++GK  +++        ++ VD  S    RLT 
Sbjct: 317 GETKALTGNWDRSVASIAWEADGKGIIVTADDVLDHPVFRVDAASGKVARLTQ 369



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 13/103 (12%)

Query: 347 ASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKD--GSQERLLVE--DSNLQAPT 396
                P  SP G  +A+         +  +  + ++     G+  R++    D N  AP 
Sbjct: 38  NRVSAPAVSPDGKWLAYQLRVTDLAGNRGRTDLYLLDLGKAGATPRMIASAPDKNESAPA 97

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYAS 438
           +S  G+SL +   + GD   +L+ + + G + E +   P   S
Sbjct: 98  FSADGKSLYYLSNRSGD--DQLWRVAVAGGSAEQVTRAPGGIS 138


>gi|145524157|ref|XP_001447906.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415439|emb|CAK80509.1| unnamed protein product [Paramecium tetraurelia]
          Length = 676

 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 112/307 (36%), Gaps = 43/307 (14%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           LWDVK  K              R +   + D I +SI              + ++++   
Sbjct: 246 LWDVKTGK-------------IRSL--FLGDRIVKSIC----------FSPNSTLLTSSS 280

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA---TYDDEDILRVYLMDTRI 246
              + V + +     Y      + +    FSP+   +A      +D+     +YL D R 
Sbjct: 281 GQFVYVWNINRGKQMYKLNGHTKNVNSVNFSPDGTTLASGDGDRFDNRGACFIYLWDIRT 340

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINI 305
            +   ++    + + +  FS NG     S   D+++  +  D+++   + +L        
Sbjct: 341 GQQKAQLYGHSNSVQSVCFSPNGNTLA-SGSSDKSIRFW--DVKTGQQKAKLDGHSDFVT 397

Query: 306 SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQGDLIAF 363
           S  +SPD +++   S DR     + +    G+ Q+++  +          +SP G  +A 
Sbjct: 398 SVCFSPDGTKLASGSYDRS----ILLWDV-GTGQQQVKFNGFIDKVMSICFSPDGYTLA- 451

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +        +  ++    + +++  + ++ +  +SP G +L        D    L+ +  
Sbjct: 452 SGSVDSLICLWYVRTGNQKAQIVGHNYDVMSICFSPDGNTLA---SGSADKFIGLWDVKT 508

Query: 424 NGRNETL 430
                 L
Sbjct: 509 GKDKAKL 515



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 103/312 (33%), Gaps = 42/312 (13%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             LWD++  +Q             +   H  S+ +        G           ++ SG
Sbjct: 333 IYLWDIRTGQQ-----------KAQLYGH--SNSVQSVCFSPNG----------NTLASG 369

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               S+   D      +         +    FSP+  K+A  +YD      + L D    
Sbjct: 370 SSDKSIRFWDVKTGQQKAKLDGHSDFVTSVCFSPDGTKLASGSYDR----SILLWDVGTG 425

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +   +   F   +++  FS +G     S   D  + ++ V    N   ++    +  +S 
Sbjct: 426 QQQVKFNGFIDKVMSICFSPDGYTLA-SGSVDSLICLWYV-RTGNQKAQIVGHNYDVMSI 483

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD + +   S     + + +        K       +      +S  G  +A     
Sbjct: 484 CFSPDGNTLASGS---ADKFIGLWDVKTGKDKAKLDGHSSGVCSVCFSHDGTTLA---SG 537

Query: 368 GEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               +I +      Q+  +L+     +Q+  +SP G++L       GD    L+ +   G
Sbjct: 538 SGDSSIRLWDVKSGQQKAKLIDHSRGVQSVCFSPDGKTLA----SSGDNSISLWDVK-TG 592

Query: 426 RNETLINTPAYA 437
           + +  +N   Y 
Sbjct: 593 KVKAKLNGHTYD 604



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 89/292 (30%), Gaps = 40/292 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K           LWDV   +Q +                   D +        G     
Sbjct: 406 TKLASGSYDRSILLWDVGTGQQQVKFN-------------GFIDKVMSICFSPDGY---- 448

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG + + +C+      N +      +  +    FSP+   +A  + D    
Sbjct: 449 ------TLASGSVDSLICLWYVRTGNQKAQIVGHNYDVMSICFSPDGNTLASGSADK--- 499

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D +  +   ++    S + +  FS +G     S   D ++ ++  D++S   + 
Sbjct: 500 -FIGLWDVKTGKDKAKLDGHSSGVCSVCFSHDGTTLA-SGSGDSSIRLW--DVKSGQQKA 555

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L +      S  +SPD   +       G   + +        K              +S
Sbjct: 556 KLIDHSRGVQSVCFSPDGKTLA----SSGDNSISLWDVKTGKVKAKLNGHTYDVHSICFS 611

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
           P G  +A         +I +      +E   L      +Q   +S  G +L 
Sbjct: 612 PDGINLA---SGSGDSSIRLWDVKTGKELANLQNSSKGIQQVCFSTDGITLA 660



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 90/269 (33%), Gaps = 21/269 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + +               + + D      +         +    FSPN   +A  + D  
Sbjct: 315 TTLASGDGDRFDNRGACFIYLWDIRTGQQKAQLYGHSNSVQSVCFSPNGNTLASGSSDK- 373

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               +   D +  +   ++      + +  FS +G +   S   D ++ ++ V       
Sbjct: 374 ---SIRFWDVKTGQQKAKLDGHSDFVTSVCFSPDGTKLA-SGSYDRSILLWDV---GTGQ 426

Query: 295 ERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           +++    FI+  +S  +SPD   +   S       + +      +QK             
Sbjct: 427 QQVKFNGFIDKVMSICFSPDGYTLASGSV---DSLICLWYVRTGNQKAQIVGHNYDVMSI 483

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            +SP G+ +A    S +KF IG+        + +L    S + +  +S  G +L      
Sbjct: 484 CFSPDGNTLA--SGSADKF-IGLWDVKTGKDKAKLDGHSSGVCSVCFSHDGTTLA---SG 537

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASD 439
            GD+  +L+ +    +   LI+       
Sbjct: 538 SGDSSIRLWDVKSGQQKAKLIDHSRGVQS 566



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 85/241 (35%), Gaps = 23/241 (9%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N         + +    FSP+ + +A  + D      + L D +  +  + +     ++ 
Sbjct: 211 NEGIKLKGHSRYVNSVCFSPDGKSLASCSDDQ----SIILWDVKTGK-IRSLFLGDRIVK 265

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV---- 317
           +  FS N    L++    + + +++++ +     +L        S ++SPD + +     
Sbjct: 266 SICFSPNST--LLTSSSGQFVYVWNIN-RGKQMYKLNGHTKNVNSVNFSPDGTTLASGDG 322

Query: 318 --FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             F  D  G   +Y+       QK        S     +SP G+ +A +  S +      
Sbjct: 323 DRF--DNRGACFIYLWDIRTGQQKAQLYGHSNSVQSVCFSPNGNTLA-SGSSDKSIRFWD 379

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +K    + +L      + +  +SP G  L        D    L+ +   G  +  +    
Sbjct: 380 VKTGQQKAKLDGHSDFVTSVCFSPDGTKLASGSY---DRSILLWDV---GTGQQQVKFNG 433

Query: 436 Y 436
           +
Sbjct: 434 F 434



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 75/188 (39%), Gaps = 18/188 (9%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           ++    +   +      +  I+   K  G+ R +  +  FS +GK    S   D+++ ++
Sbjct: 190 ISGMNLNQAKLYNCNWKNLIINEGIKLKGHSRYVN-SVCFSPDGKSLA-SCSDDQSIILW 247

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             D+++     L     I  S  +SP+S+ +   S     + +YV   N   Q       
Sbjct: 248 --DVKTGKIRSLFLGDRIVKSICFSPNSTLLTSSS----GQFVYVWNINRGKQMYKLNGH 301

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQE--RLLVEDSNLQAPTW 397
             +     +SP G  +A     G++F       I +      Q+  +L    +++Q+  +
Sbjct: 302 TKNVNSVNFSPDGTTLA--SGDGDRFDNRGACFIYLWDIRTGQQKAQLYGHSNSVQSVCF 359

Query: 398 SPSGRSLI 405
           SP+G +L 
Sbjct: 360 SPNGNTLA 367


>gi|117919593|ref|YP_868785.1| peptidase S41 [Shewanella sp. ANA-3]
 gi|117611925|gb|ABK47379.1| peptidase S41 [Shewanella sp. ANA-3]
          Length = 1093

 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 116/307 (37%), Gaps = 36/307 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +Q    +   +  R+ F+S+S  +      L  M  DG++ + LT  +D  +   R   +
Sbjct: 215 HQGSVRQPMLWQDRLYFISDSDGNDN----LWSMALDGSDAKQLTQYKDWQVRGARM--D 268

Query: 223 QQKVAY----------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           Q KV +               + +L + L      R    + +      +   +  G + 
Sbjct: 269 QGKVVFQQGADIHVFDIASAKDSLLDIELTSDFAQRREHWVKDPMDFATSANLALAGDKV 328

Query: 273 LISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           +I+ +      +    +  +   ++     +   +A  S D   +   SD  G+++++  
Sbjct: 329 VITAR----SHVAIAGIDGSRLVQVALPGTYRVRNAIMSQDGKSVYAISDMSGQQEIWQF 384

Query: 332 QSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            ++GS   K++++D          S  G  +A     G    + ++    +  + ++ + 
Sbjct: 385 PADGSSGAKQLTKDGHTLRMTLSLSNDGRYLAHDDNDG---NVWLLDLKKNSNQKIISNG 441

Query: 391 NLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLIN------TPAYASD 439
               P     WS   R +  ++ + G    ++    ++  + +TL +      +P ++ D
Sbjct: 442 EGLGPYADIRWSADSRFIALTKSEIGKQRPQIVLYSVDENKAQTLTSDKYESYSPTFSRD 501

Query: 440 PQWVGFM 446
            QW+ F+
Sbjct: 502 GQWLYFL 508



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 61/159 (38%), Gaps = 10/159 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSN-ATERLT-NTLFINISASYSPDSSQIVFESDRE 323
           S +GK            +I+      +   ++LT +   + ++ S S D   +    D +
Sbjct: 363 SQDGKSVYAISDMSGQQEIWQFPADGSSGAKQLTKDGHTLRMTLSLSNDGRYLA-HDDND 421

Query: 324 GKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKD 379
           G   ++++    +  ++I  + E    Y D  WS     IA TK     ++  I +   D
Sbjct: 422 GN--VWLLDLKKNSNQKIISNGEGLGPYADIRWSADSRFIALTKSEIGKQRPQIVLYSVD 479

Query: 380 GSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            ++ + L  D     +PT+S  G+ L F   +       
Sbjct: 480 ENKAQTLTSDKYESYSPTFSRDGQWLYFLSNRQFTATPS 518



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 62/163 (38%), Gaps = 13/163 (7%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKV 226
             +    S+      ++     +  +     DG+   + LT     +      S + + +
Sbjct: 356 RVRNAIMSQDGKSVYAISDMSGQQEIWQFPADGSSGAKQLTKDGHTLRMTLSLSNDGRYL 415

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDE-- 280
           A+   D      V+L+D + +   K I N     L P    R+S++ +   ++  +    
Sbjct: 416 AHDDNDG----NVWLLDLKKNSNQKIISNGEG--LGPYADIRWSADSRFIALTKSEIGKQ 469

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
              I    +  N  + LT+  + + S ++S D   + F S+R+
Sbjct: 470 RPQIVLYSVDENKAQTLTSDKYESYSPTFSRDGQWLYFLSNRQ 512



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 80/221 (36%), Gaps = 28/221 (12%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L       A  +  + +    AP      +  + + + D    +++  L   A  RLT  
Sbjct: 14  LGTLSAAHAIAQPASNQGYYRAPALHD--QTLVFTAEGD----LWTQTLGQKAATRLTTL 67

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               + A+ S D   + + ++ EG  ++YV+   G   KR+S +  +      W+ +G+ 
Sbjct: 68  PAEELGAAISADGKWVAYVANYEGASEVYVIPVAGGVAKRVSFE-NSRVRLQGWTAKGE- 125

Query: 361 IAFTKFSG----EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK------- 409
           + ++  SG      + + ++  +      L     ++      + + + F+R        
Sbjct: 126 VLYSTDSGFGPANNWMLRLVNPETLATTDLPLADAVEGVV-DANNQYVYFTRFGLQVTGD 184

Query: 410 ----KDGDTGSKLYSIDLNGRNETLINTP---AYASDPQ-W 442
                 G    +L+   L G++E  + +         P  W
Sbjct: 185 NAKVYRGGAKGELWRFKLGGKDEAQLLSGQHQGSVRQPMLW 225



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 59/208 (28%), Gaps = 63/208 (30%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN- 299
              T   +A  R+    +  L    S++GK        + A ++Y + +     +R++  
Sbjct: 52  WTQTLGQKAATRLTTLPAEELGAAISADGKWVAYVANYEGASEVYVIPVAGGVAKRVSFE 111

Query: 300 -----------------------TLFIN---------------------ISASYSPDSSQ 315
                                      N                     +      ++  
Sbjct: 112 NSRVRLQGWTAKGEVLYSTDSGFGPANNWMLRLVNPETLATTDLPLADAVEGVVDANNQY 171

Query: 316 IVFES------------DREG-KEQLYVMQSNGSDQKRI-SQDKEASYFDPV-WSPQGDL 360
           + F               R G K +L+  +  G D+ ++ S   + S   P+ W    D 
Sbjct: 172 VYFTRFGLQVTGDNAKVYRGGAKGELWRFKLGGKDEAQLLSGQHQGSVRQPMLWQ---DR 228

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           + F   S     +  M  DGS  + L +
Sbjct: 229 LYFISDSDGNDNLWSMALDGSDAKQLTQ 256



 Score = 40.0 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 275 SVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +     +++   L      +L                D  ++ F SD +G + L+ M 
Sbjct: 188 VYRGGAKGELWRFKLGGKDEAQLLSGQHQGSVRQPMLWQD--RLYFISDSDGNDNLWSMA 245

Query: 333 SNGSDQKRISQDKEA 347
            +GSD K+++Q K+ 
Sbjct: 246 LDGSDAKQLTQYKDW 260


>gi|332711151|ref|ZP_08431085.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332350133|gb|EGJ29739.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1239

 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 63/330 (19%), Positives = 120/330 (36%), Gaps = 42/330 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ +  G D   V  RLW+V   + +    +           HT  + I+       G  
Sbjct: 829  GQTLVSGSDDQTV--RLWNVSSGECL---NYLQG--------HT--NSIFSVAFNRDG-- 871

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    ++V SG    ++ + +        +       +F   FSPN Q++A A+ D+
Sbjct: 872  --------QTVASGSSDQTVRLWNSKTGRCLKILQGYTNSVFSAVFSPNGQQLASASTDN 923

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L D   D   KR+      + +  F  NG   L S   D+ + ++SV      
Sbjct: 924  ----MVRLWDVSSDNCLKRLEGHTGWVTSVAFHPNG-EILASSSADQTIHLWSVS-TGQC 977

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             + L    +   S S+SP    +    D    + + +   N     +I +   +  +   
Sbjct: 978  LKVLCGHSYWVQSVSFSPLGETLASSGD---DKTIRLWDVNTGQCFKILRGHTSWIWSVT 1034

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            +S  G  +A +    E   +  ++     + L    S +Q+  +SP G++L+ S    GD
Sbjct: 1035 FSRDGQTLA-SASEDETIRLWDVRSSECLKVLQGHTSRVQSVAFSPDGQTLVSSS---GD 1090

Query: 414  TGSKLYSIDLNGRNETLINTPAYASDPQWV 443
               +++ +   G    ++      S   W 
Sbjct: 1091 QTVRIWDVR-TGECVRIL---RGHSKGVWS 1116



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 88/240 (36%), Gaps = 19/240 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G ++  L +   +      +       ++   FSP+   +A  + D      + L +  
Sbjct: 624 TGDVEGQLRLWQVENGKPILICKGHTGWVWSVAFSPDGNTLASCSSDK----TIKLWNVS 679

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFIN 304
             +  K +    S I +  FS +GK    S   +  + ++  D+ +    ++        
Sbjct: 680 TGQCIKTLEGHTSSIWSVAFSRDGKTLA-SGSDESTVRLW--DVNTGECRQVCQGHTGQV 736

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S ++S D   +   SD    + + +   +  + ++I        +   +SP G ++A  
Sbjct: 737 LSVAFSADGKTLASGSD---DQTVRLWDLSTGECRQICYGHTNRIWSVNFSPDGAMLASA 793

Query: 365 KFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                 F I +      +    L      +++  +S  G++L+       D   +L+++ 
Sbjct: 794 SAD---FTIKLWDPCTGECLNTLTNHSDRVRSVMFSGDGQTLVSGSD---DQTVRLWNVS 847



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 55/318 (17%), Positives = 111/318 (34%), Gaps = 30/318 (9%)

Query: 88   KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
             Q + +  S    + WNS       TGR +K  +      F      + +Q+      +S
Sbjct: 871  GQTVASGSSDQTVRLWNSK------TGRCLKILQGYTNSVFSAVFSPNGQQLAS----AS 920

Query: 148  PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRY 205
              +  ++    SD+  + + G  G + + + F        S     ++ +          
Sbjct: 921  TDNMVRLWDVSSDNCLKRLEGHTG-WVTSVAFHPNGEILASSSADQTIHLWSVSTGQCLK 979

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            +       +    FSP  + +A       D   + L D    +  K +    S I +  F
Sbjct: 980  VLCGHSYWVQSVSFSPLGETLA----SSGDDKTIRLWDVNTGQCFKILRGHTSWIWSVTF 1035

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +G+    S  +DE + ++  D++S+   + L        S ++SPD   +V  S   G
Sbjct: 1036 SRDGQTLA-SASEDETIRLW--DVRSSECLKVLQGHTSRVQSVAFSPDGQTLVSSS---G 1089

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             + + +      +  RI +      +   +SP G+LIA          I + +    +  
Sbjct: 1090 DQTVRIWDVRTGECVRILRGHSKGVWSVAFSPDGELIASGSLDQT---IRLWQASTGKYL 1146

Query: 385  LLVEDSNLQAPT---WSP 399
              +        +   +SP
Sbjct: 1147 RTLHGHRNSVRSSIGFSP 1164



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 56/314 (17%), Positives = 112/314 (35%), Gaps = 46/314 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G D   V  RLWDV   +              R++    +  +        G  
Sbjct: 703 GKTLASGSDESTV--RLWDVNTGE-------------CRQVCQGHTGQVLSVAFSADG-- 745

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                   +++ SG    ++ + D      R +       ++   FSP+   +A A+ D 
Sbjct: 746 --------KTLASGSDDQTVRLWDLSTGECRQICYGHTNRIWSVNFSPDGAMLASASAD- 796

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L D         + N    + +  FS +G+  + S   D+ + ++  ++ S  
Sbjct: 797 ---FTIKLWDPCTGECLNTLTNHSDRVRSVMFSGDGQTLV-SGSDDQTVRLW--NVSSGE 850

Query: 294 ----TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                +  TN++F   S +++ D   +   S     + + +  S      +I Q    S 
Sbjct: 851 CLNYLQGHTNSIF---SVAFNRDGQTVASGSS---DQTVRLWNSKTGRCLKILQGYTNSV 904

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           F  V+SP G  +A +  +     +  +  D   +RL      + +  + P+G  L  S  
Sbjct: 905 FSAVFSPNGQQLA-SASTDNMVRLWDVSSDNCLKRLEGHTGWVTSVAFHPNGEILASSS- 962

Query: 410 KDGDTGSKLYSIDL 423
              D    L+S+  
Sbjct: 963 --ADQTIHLWSVST 974



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 74/220 (33%), Gaps = 19/220 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +      ++F   FSP+ + +A  T D E  LR  L      +           + + 
Sbjct: 600 KSVFTKTLGVVFGVAFSPDGKLLA--TGDVEGQLR--LWQVENGKPILICKGHTGWVWSV 655

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDR 322
            FS +G     S   D+ + ++  ++ +    + L        S ++S D   +   SD 
Sbjct: 656 AFSPDGNTLA-SCSSDKTIKLW--NVSTGQCIKTLEGHTSSIWSVAFSRDGKTLASGSDE 712

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                + +   N  + +++ Q          +S  G  +A          + +      +
Sbjct: 713 S---TVRLWDVNTGECRQVCQGHTGQVLSVAFSADGKTLASGSDDQT---VRLWDLSTGE 766

Query: 383 ERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            R +     + + +  +SP G  L        D   KL+ 
Sbjct: 767 CRQICYGHTNRIWSVNFSPDGAMLA---SASADFTIKLWD 803



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 53/364 (14%), Positives = 117/364 (32%), Gaps = 82/364 (22%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
               +  + RLW V++ K I+             I    +  ++       G        
Sbjct: 623 ATGDVEGQLRLWQVENGKPIL-------------ICKGHTGWVWSVAFSPDG-------- 661

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              ++ S     ++ + +                ++   FS + + +A       D   V
Sbjct: 662 --NTLASCSSDKTIKLWNVSTGQCIKTLEGHTSSIWSVAFSRDGKTLA----SGSDESTV 715

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-- 297
            L D       +        +L+  FS++GK    S   D+ + ++  DL +    ++  
Sbjct: 716 RLWDVNTGECRQVCQGHTGQVLSVAFSADGKTLA-SGSDDQTVRLW--DLSTGECRQICY 772

Query: 298 --TNTLFINISASYSPDSSQIV-----FE------------------SDR------EGKE 326
             TN ++   S ++SPD + +      F                   SDR       G  
Sbjct: 773 GHTNRIW---SVNFSPDGAMLASASADFTIKLWDPCTGECLNTLTNHSDRVRSVMFSGDG 829

Query: 327 Q----------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           Q          + +   +  +     Q    S F   ++  G  +A +  S +   +   
Sbjct: 830 QTLVSGSDDQTVRLWNVSSGECLNYLQGHTNSIFSVAFNRDGQTVA-SGSSDQTVRLW-N 887

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            K G   ++L    +++ +  +SP+G+ L  +     D   +L+ +  +   + L     
Sbjct: 888 SKTGRCLKILQGYTNSVFSAVFSPNGQQLASAST---DNMVRLWDVSSDNCLKRLEGHTG 944

Query: 436 YASD 439
           + + 
Sbjct: 945 WVTS 948



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 66/204 (32%), Gaps = 13/204 (6%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  +V       + +    +     D +         ++    FS +GK    +   +  
Sbjct: 572 DFSRVTIWQAYLQGVDLQDVNFAHSDLSKSVFTKTLGVVFGVAFSPDGKLLA-TGDVEGQ 630

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + ++ V+                 S ++SPD + +   S     + + +   +     + 
Sbjct: 631 LRLWQVE-NGKPILICKGHTGWVWSVAFSPDGNTLASCSS---DKTIKLWNVSTGQCIKT 686

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSP 399
            +   +S +   +S  G  +A      ++  + +   +  + R +       + +  +S 
Sbjct: 687 LEGHTSSIWSVAFSRDGKTLA---SGSDESTVRLWDVNTGECRQVCQGHTGQVLSVAFSA 743

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL 423
            G++L        D   +L+ +  
Sbjct: 744 DGKTLASGSD---DQTVRLWDLST 764


>gi|145590728|ref|YP_001152730.1| peptidase S41 [Pyrobaculum arsenaticum DSM 13514]
 gi|145282496|gb|ABP50078.1| peptidase S41 [Pyrobaculum arsenaticum DSM 13514]
          Length = 1016

 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 69/193 (35%), Gaps = 28/193 (14%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---- 320
            +  G   +   + D          +  A +RLT+   + I   +SPD   I F      
Sbjct: 8   PDIHGDEIVFVTEDDLWRY------RGGAGQRLTSDFGVVIRPKFSPDGKWIAFTRLQQT 61

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMK 377
           D+     +YV+ + G + +R++           W+P G ++A++ +     +   +  + 
Sbjct: 62  DQGTTSDVYVIPAEGGEPRRLTYFGTPFTRVVGWTPDGRVLAYSDYKTPFPQWRELYAIA 121

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI----------FSRKKDGDTGSKLYSIDLNGRN 427
            DG+ ERL +  +          G  ++          + R + G  G    S D     
Sbjct: 122 LDGTYERLNLGPATALVY---GDGGVVVLGRNNYELPHWKRYRGGARGVLWISRDGGKTF 178

Query: 428 ETLINTPAYASDP 440
              ++ P   + P
Sbjct: 179 AKFLDLPGNITSP 191



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 84/236 (35%), Gaps = 47/236 (19%)

Query: 221 PN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--- 275
           P+    ++ + T DD    R          A +R+ +   +++ P+FS +GK    +   
Sbjct: 8   PDIHGDEIVFVTEDDLWRYR--------GGAGQRLTSDFGVVIRPKFSPDGKWIAFTRLQ 59

Query: 276 -VQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQ---LYV 330
              +    D+Y +  +     RLT           ++PD   + +   +    Q   LY 
Sbjct: 60  QTDQGTTSDVYVIPAEGGEPRRLTYFGTPFTRVVGWTPDGRVLAYSDYKTPFPQWRELYA 119

Query: 331 MQSNGSDQK--------------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +  +G+ ++               +      +Y  P W          ++ G    +  +
Sbjct: 120 IALDGTYERLNLGPATALVYGDGGVVVLGRNNYELPHW---------KRYRGGARGVLWI 170

Query: 377 KKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +DG +   + L    N+ +P     G  + F    +G     LYS+DL+G +   
Sbjct: 171 SRDGGKTFAKFLDLPGNITSPMIV--GGRVFFVSDHEG--VGNLYSVDLSGGDLRR 222



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 69/167 (41%), Gaps = 10/167 (5%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            + A  ++G     +     +++G++  ++   D A+++YS+D      +R+     + +
Sbjct: 309 WEGAVVQLGERGGGVRYKHVATDGEKIAVAT-YDGAVEVYSID--GRIVKRI--EPGVGL 363

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             + +   S+I   + R    +L+++         + + +     +  W P G  +A+ K
Sbjct: 364 VEALAVKGSKIALANHRG---ELWILDLESGAASLVDRSEYGLITEMAWHPSGRWLAYAK 420

Query: 366 FSG-EKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKK 410
            +G     I ++     +   +    +   +P + P GR L F  ++
Sbjct: 421 PAGVYAQNIRLLDATTGKAYDVTSPTAYDYSPAFDPHGRYLYFLSRR 467



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 49/143 (34%), Gaps = 11/143 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEP------RFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           + V   DGA   Y    R     EP        +    K+A A +  E    ++++D   
Sbjct: 335 IAVATYDGAVEVYSIDGRIVKRIEPGVGLVEALAVKGSKIALANHRGE----LWILDLES 390

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINI 305
             A     +   +I    +  +G+    +      A +I  +D  +     +T+    + 
Sbjct: 391 GAASLVDRSEYGLITEMAWHPSGRWLAYAKPAGVYAQNIRLLDATTGKAYDVTSPTAYDY 450

Query: 306 SASYSPDSSQIVFESDREGKEQL 328
           S ++ P    + F S R     L
Sbjct: 451 SPAFDPHGRYLYFLSRRALNPAL 473



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 93/318 (29%), Gaps = 75/318 (23%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
             D + +    + +    WR++     D  Y+ +                      +  +
Sbjct: 96  TPDGRVLAYSDYKTPFPQWRELYAIALDGTYERL---------------------NLGPA 134

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
             ++  DG  +  L  +  ++    R+    + V + + D       +L           
Sbjct: 135 TALVYGDGG-VVVLGRNNYELPHWKRYRGGARGVLWISRDGGKTFAKFL----------- 182

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
             +    I +P     G R       +   ++YSVDL      R TN     +  + S D
Sbjct: 183 --DLPGNITSP--MIVGGRVFFVSDHEGVGNLYSVDLSGGDLRRHTNFTDFYVRNA-SSD 237

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +IVF+        +++        +R+         D   S +  +  F      K+ 
Sbjct: 238 GRRIVFQV----AGDIWLYDPAADKLERL-------DIDLPLSRKAKMAKFV--DPLKYL 284

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTW-------------------SPSGRSLIFSRKKDGD 413
                  G +  ++        P+W                   +  G  +  +     D
Sbjct: 285 EYFALASGERLAVITRGQAFLVPSWEGAVVQLGERGGGVRYKHVATDGEKIAVATY---D 341

Query: 414 TGSKLYSIDLNGRNETLI 431
              ++YSID  GR    I
Sbjct: 342 GAVEVYSID--GRIVKRI 357



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 56/347 (16%), Positives = 113/347 (32%), Gaps = 53/347 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G V++ G+    V ++     D ++I    +  +   +     +I   I + I  E G  
Sbjct: 311 GAVVQLGERGGGVRYKHV-ATDGEKIAVATYDGAVEVY-----SIDGRIVKRI--EPGVG 362

Query: 174 NSRILFVSESVVS-GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
               L V  S ++    +  L ++D +      +  S   ++ E  + P+ + +AYA   
Sbjct: 363 LVEALAVKGSKIALANHRGELWILDLESGAASLVDRSEYGLITEMAWHPSGRWLAYA--- 419

Query: 233 DEDILRVYLMDTR----IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI---- 284
                 VY  + R           + +  +   +P F  +G+      ++     +    
Sbjct: 420 --KPAGVYAQNIRLLDATTGKAYDVTSPTAYDYSPAFDPHGRYLYFLSRRALNPALDPVQ 477

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSS-QIVFESDREG----------KEQLY--VM 331
           +      ++   L      + S         + V + D EG          +E LY  V+
Sbjct: 478 FVYSFAKHSKPYLVVLRKDDASPFVEYKRREEKVEDIDVEGIERRVEPFPVEEGLYSAVV 537

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              G     +  D E +    +WS Q    A          + V   +      L+   +
Sbjct: 538 GLKGGKVAWLKYDVEGALRYYLWSAQERRGA----------VEVYDLETKMREQLISGVS 587

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                 SP G+ L+          ++L  ID+  + +     P   S
Sbjct: 588 AMRA--SPDGKYLLV------KEENRLRLIDIEKKPDVQSREPGRKS 626


>gi|145590968|ref|YP_001152970.1| peptidase S9 prolyl oligopeptidase [Pyrobaculum arsenaticum DSM
           13514]
 gi|145282736|gb|ABP50318.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Pyrobaculum arsenaticum DSM 13514]
          Length = 626

 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 56/310 (18%), Positives = 108/310 (34%), Gaps = 57/310 (18%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
               RILF    +     +    V   DG   R + P    +  +P  SP+  ++A  + 
Sbjct: 19  AGGGRILFTVTRISLENDRYESSVWACDGG-CRAVLPGPFDVSAKP--SPDGSRIALLSR 75

Query: 232 DD--EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--------- 280
               E    V L        P+ +  F   +L   ++ +G+   +   +           
Sbjct: 76  RGFGEKEKGVGLWVAEWGGEPRLLAKFLG-VLDYAWAPSGEALAVVAYEGSPEADVKHAE 134

Query: 281 ---------------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG- 324
                          +  +Y VD  S   E+LT      + A++SPD  ++ +   R+  
Sbjct: 135 RLPLWINDFGFAYNVSSHLYLVDAYSGVVEKLTEGDVRVLKAAFSPDGRRVAYAVARDWL 194

Query: 325 ---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKF----AIGVM 376
               + + V+     + +        S  +  W P G  +AFT       F     + V+
Sbjct: 195 RPYLQDVVVLDLKSGE-RATWASGYTSVTEIAWHPNGRGLAFTGHLRPRGFSSHSRVWVV 253

Query: 377 KKDGSQERLLV----------EDSNLQAPTWSP----SGRSLIFSRKKDGDTGSKLYSID 422
           + +G + R L            +S+ + P+++      G S++F     G  G  +Y   
Sbjct: 254 E-EGGEPRCLTCSFKYGVGNGVNSDARGPSYTRSLYWDGGSVLFQATVGGSVG--VYRAS 310

Query: 423 LNGRNETLIN 432
           L+G  E ++ 
Sbjct: 311 LSGEVEAVLA 320


>gi|288926776|ref|ZP_06420686.1| prolyl oligopeptidase family protein [Prevotella buccae D17]
 gi|288336457|gb|EFC74833.1| prolyl oligopeptidase family protein [Prevotella buccae D17]
          Length = 723

 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 79/234 (33%), Gaps = 63/234 (26%)

Query: 266 SSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +G+R    V      +      +Y +D       +LT        A++     +I F 
Sbjct: 56  SPDGRRIAYQVGYYSVKENKGHQILYVMDADGKNIRQLTTDAKNETDAAWIEGGRRIAFL 115

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----------------- 362
             R+G  QL+ M ++G+ +++++ DK        +SP G  +                  
Sbjct: 116 --RDG--QLWAMNADGTGRRQLTNDK-TDIEGFKFSPDGRHVLLIKSLPYHGTIKANPTD 170

Query: 363 -------------------FTKFSGEKFAIGVMK--KDGSQERL--------LVEDSNLQ 393
                              + +     F  GV     DG  + L        L     ++
Sbjct: 171 LPKATGRLVTDMNYRHWDHYVETIAHPFVAGVNDGKVDGGVDILEGQPYESPLAPFGGIE 230

Query: 394 APTWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              WS   + + ++ RKK+G      T + +Y  +++ R    +  PA   +P 
Sbjct: 231 QFDWSKDSKCVAYTCRKKEGVQYAISTDADIYLYNIDTRETRNLCKPADYREPA 284



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 51/338 (15%), Positives = 105/338 (31%), Gaps = 95/338 (28%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        L VMD DG NIR LT        +  +    +++A+             
Sbjct: 69  YSVKENKGHQILYVMDADGKNIRQLTTDAKN-ETDAAWIEGGRRIAFLRDGQ------LW 121

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTN 299
                    +++ N ++ I   +FS +G+  L+  S+     +     DL       +T+
Sbjct: 122 AMNADGTGRRQLTNDKTDIEGFKFSPDGRHVLLIKSLPYHGTIKANPTDLPKATGRLVTD 181

Query: 300 --------------------------TLFINI-------SA----------SYSPDSSQI 316
                                        ++I       S            +S DS  +
Sbjct: 182 MNYRHWDHYVETIAHPFVAGVNDGKVDGGVDILEGQPYESPLAPFGGIEQFDWSKDSKCV 241

Query: 317 VFE-SDREGKE-------QLYVMQSNGSDQKRISQDKE---------------------- 346
            +    +EG +        +Y+   +  + + + +  +                      
Sbjct: 242 AYTCRKKEGVQYAISTDADIYLYNIDTRETRNLCKPADYREPAIDATKTMKTQAVNHQSG 301

Query: 347 ----ASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAP 395
                   +P +SP G  IA+   +   +      + V      +++ + E  DSN++  
Sbjct: 302 DMNVGYDVNPRFSPDGKYIAWQSMAHNGYESDRNRLCVYDLRTGEKKYVAESFDSNVEDF 361

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            W+   R+L F           +Y  +L+G+ + L + 
Sbjct: 362 CWAADSRTLYFLGI--WHACVMVYQTNLDGQVKQLTDG 397



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/366 (13%), Positives = 97/366 (26%), Gaps = 101/366 (27%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            G        R    +V +         QI+   +                   + +T +
Sbjct: 50  IGGAQASPDGRRIAYQVGYYSVKENKGHQIL---YVMDADG----------KNIRQLTTD 96

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
             +            ++ +    L  M+ DG   R LT  +  I    +FSP+ + V   
Sbjct: 97  AKNETDAAWIEGGRRIAFLRDGQLWAMNADGTGRRQLTNDKTDIEGF-KFSPDGRHVLLI 155

Query: 230 TYDDEDI---------------------LRVYLMDTRIDRAPKRIGNFRSMI-------- 260
                                        R +         P   G     +        
Sbjct: 156 KSLPYHGTIKANPTDLPKATGRLVTDMNYRHWDHYVETIAHPFVAGVNDGKVDGGVDILE 215

Query: 261 -------LAP-------RFSSNGKRALISVQKDEA--------MDIYSVDLQSNATERL- 297
                  LAP        +S + K    + +K E          DIY  ++ +  T  L 
Sbjct: 216 GQPYESPLAPFGGIEQFDWSKDSKCVAYTCRKKEGVQYAISTDADIYLYNIDTRETRNLC 275

Query: 298 ------------TNTL--------------FINISASYSPDSSQIVFES-----DREGKE 326
                       T T+                +++  +SPD   I ++S         + 
Sbjct: 276 KPADYREPAIDATKTMKTQAVNHQSGDMNVGYDVNPRFSPDGKYIAWQSMAHNGYESDRN 335

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +L V      ++K +++  +++  D  W+     + F         +     DG Q + L
Sbjct: 336 RLCVYDLRTGEKKYVAESFDSNVEDFCWAADSRTLYFLGIWHACVMVYQTNLDG-QVKQL 394

Query: 387 VEDSNL 392
            +    
Sbjct: 395 TDGWYD 400



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 28/121 (23%)

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------TKFSGEKFA 372
           +SDR   E L+ M   G  Q                SP G  IA+       K +     
Sbjct: 35  QSDRMTPEALWAMGRIGGAQA---------------SPDGRRIAYQVGYYSVKENKGHQI 79

Query: 373 IGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           + VM  DG   R L  D+  +    W   GR + F R        +L++++ +G     +
Sbjct: 80  LYVMDADGKNIRQLTTDAKNETDAAWIEGGRRIAFLRD------GQLWAMNADGTGRRQL 133

Query: 432 N 432
            
Sbjct: 134 T 134



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 38/99 (38%), Gaps = 5/99 (5%)

Query: 212 QILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                PRFSP+ + +A+ +        D  R+ + D R         +F S +    +++
Sbjct: 306 GYDVNPRFSPDGKYIAWQSMAHNGYESDRNRLCVYDLRTGEKKYVAESFDSNVEDFCWAA 365

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           + +           + +Y  +L     ++LT+  +   S
Sbjct: 366 DSRTLYFLGIWHACVMVYQTNLD-GQVKQLTDGWYDYGS 403



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 398 SPSGRSLIF----SRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWV 443
           SP GR + +       K+      LY +D +G+N   + T A   +D  W+
Sbjct: 56  SPDGRRIAYQVGYYSVKENKGHQILYVMDADGKNIRQLTTDAKNETDAAWI 106


>gi|332710180|ref|ZP_08430133.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332351138|gb|EGJ30725.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1678

 Score = 88.9 bits (219), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 108/301 (35%), Gaps = 54/301 (17%)

Query: 163  YQSITGEKG-DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
             Q++TG  G  ++ R     +S+ +      + +   +G   + +  + D+ +    FSP
Sbjct: 1138 IQTLTGHTGWVWSVRFSPDLKSLAASSEDGRVIIWSLEGKKPQ-IFKAHDKAVLSISFSP 1196

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + + +A  ++D+   L     +    R P  I      + +  FS  GK    +  KD+ 
Sbjct: 1197 DSKVLATGSFDNTVKLWRRDRNGLYKRKPLTIQAHEDAVFSVSFSPKGKLIA-TGSKDKT 1255

Query: 282  MDIYSVDLQSNATERLTN-----TLFINISASYSPDSSQIVFES--------DREGK--- 325
            + ++ +D      + L N           S ++SPD   +   S        +R GK   
Sbjct: 1256 VKLWKMD--GTRYQTLGNDDHESHQSTVTSITFSPDGQTLASASADNTVKLWNRNGKLLE 1313

Query: 326  --------------------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                                      +    + S   ++  I   +E + F   +SP G 
Sbjct: 1314 TLTGHESTVWSVNFSPDSQTLASASADNTVKLWSRYGNELPIPTGEENTVFSVSYSPDGQ 1373

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKL 418
             IA    +     I +   +G  +R L   ++     ++SP G+++        D  +KL
Sbjct: 1374 TIATASKNNT---IQLWSLNGQLQRTLTGHTDWVWGVSFSPDGKTIA---SASADKTAKL 1427

Query: 419  Y 419
            +
Sbjct: 1428 W 1428



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 91/235 (38%), Gaps = 19/235 (8%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G   R      +  +    FSP+ + +A A+ D+  I      +        +    +  
Sbjct: 1050 GVRERNRLEGHNDTVNNVSFSPDGELIATASSDNVKIWSKEGKELYTLAGKHK---HKDE 1106

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            I +  FS +GK    +  KD+ + ++  +      + LT       S  +SPD   +   
Sbjct: 1107 IRSVTFSPDGKLIA-TASKDKTVKVWQRN--GKYIQTLTGHTGWVWSVRFSPDLKSLA-A 1162

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            S  +G+  ++ ++     + +I +  + +     +SP   ++A   F      +    ++
Sbjct: 1163 SSEDGRVIIWSLE---GKKPQIFKAHDKAVLSISFSPDSKVLATGSFDNTV-KLWRRDRN 1218

Query: 380  GSQERLLVEDSNLQ----APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            G  +R  +     +    + ++SP G+ +    K   D   KL+ +D   R +TL
Sbjct: 1219 GLYKRKPLTIQAHEDAVFSVSFSPKGKLIATGSK---DKTVKLWKMDGT-RYQTL 1269



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 112/304 (36%), Gaps = 27/304 (8%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT-GEKGDFNSRILFVSESVVSGIIKNSL 193
            D + +      ++   W +        + +++T  E   ++      S+++ S    N++
Sbjct: 1289 DGQTLASASADNTVKLWNRNG-----KLLETLTGHESTVWSVNFSPDSQTLASASADNTV 1343

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             +  R G N   +    +  +F   +SP+ Q +A A+        + L      +  + +
Sbjct: 1344 KLWSRYG-NELPIPTGEENTVFSVSYSPDGQTIATAS----KNNTIQLWSLN-GQLQRTL 1397

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                  +    FS +GK    S   D+   ++  +        L+    +  S ++SPD 
Sbjct: 1398 TGHTDWVWGVSFSPDGKTIA-SASADKTAKLW--NKNGKLLHTLSGHEKVVRSITFSPDG 1454

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA- 372
              I   + R+   +L+    NG   + ++           +SP G+ +A    +      
Sbjct: 1455 KIIA-TASRDNTVKLW--NQNGILIRTLTGHTNW-VNSVTFSPDGETLATASAATASSDP 1510

Query: 373  -IGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             + +      +E    +       +  +SP G++L  + +   D   KL+++  +G   T
Sbjct: 1511 TVKLWNVSDGKELKSFDGHTDWVFSVRFSPDGKTLASASR---DKTVKLWNVS-DGEELT 1566

Query: 430  LINT 433
             ++ 
Sbjct: 1567 SLDG 1570



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/340 (13%), Positives = 126/340 (37%), Gaps = 34/340 (10%)

Query: 89   QKITNPDSIPRFQDWNSLGAQVLV-TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
            Q + +  +    + W+  G ++ + TG            + +      +   I     + 
Sbjct: 1332 QTLASASADNTVKLWSRYGNELPIPTGEENTVFSVSYSPDGQTIATASKNNTIQLWSLNG 1391

Query: 148  PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
                    HT  D ++       G          +++ S     +  + +++G  +  L+
Sbjct: 1392 QLQRTLTGHT--DWVWGVSFSPDG----------KTIASASADKTAKLWNKNGKLLHTLS 1439

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               ++++    FSP+ + +A A+ D  + ++++  +       + +    + + +  FS 
Sbjct: 1440 -GHEKVVRSITFSPDGKIIATASRD--NTVKLWNQN---GILIRTLTGHTNWVNSVTFSP 1493

Query: 268  NGKRALISVQK----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +G+    +       D  + +++V       +          S  +SPD   +   S R+
Sbjct: 1494 DGETLATASAATASSDPTVKLWNVS-DGKELKSFDGHTDWVFSVRFSPDGKTLASAS-RD 1551

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               +L+ +  +G +   +    + + +  V+SP G+ IA          + V  + G Q 
Sbjct: 1552 KTVKLWNVS-DGEELTSL-DGHQNTVWSVVFSPDGETIATASADQT---VKVWNRKGKQL 1606

Query: 384  RLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +     D  + + ++SP G+++      D      ++++D
Sbjct: 1607 QTFYGHDDGVVSLSFSPDGQTIA---SSDSSARVIIWNLD 1643



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 100/285 (35%), Gaps = 21/285 (7%)

Query: 130  LWDVK---DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            +W V    D + +      ++   W +  + +     +  T     F+       +++ +
Sbjct: 1322 VWSVNFSPDSQTLASASADNTVKLWSRYGNELPIPTGEENT----VFSVSYSPDGQTIAT 1377

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                N++ +   +G  ++         ++   FSP+ + +A A+ D    L       + 
Sbjct: 1378 ASKNNTIQLWSLNGQ-LQRTLTGHTDWVWGVSFSPDGKTIASASADKTAKLW-----NKN 1431

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             +    +     ++ +  FS +GK    +  +D  + ++  +        LT       S
Sbjct: 1432 GKLLHTLSGHEKVVRSITFSPDGKIIA-TASRDNTVKLW--NQNGILIRTLTGHTNWVNS 1488

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASY-FDPVWSPQGDLIAFT 364
             ++SPD   +   S         V   N SD K + S D    + F   +SP G  +A  
Sbjct: 1489 VTFSPDGETLATASAATASSDPTVKLWNVSDGKELKSFDGHTDWVFSVRFSPDGKTLASA 1548

Query: 365  KFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSR 408
                      V   DG +   L    + + +  +SP G ++  + 
Sbjct: 1549 SRDKTVKLWNV--SDGEELTSLDGHQNTVWSVVFSPDGETIATAS 1591


>gi|304409393|ref|ZP_07391013.1| peptidase S41 [Shewanella baltica OS183]
 gi|307303751|ref|ZP_07583504.1| peptidase S41 [Shewanella baltica BA175]
 gi|304351911|gb|EFM16309.1| peptidase S41 [Shewanella baltica OS183]
 gi|306912649|gb|EFN43072.1| peptidase S41 [Shewanella baltica BA175]
          Length = 1094

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 115/297 (38%), Gaps = 36/297 (12%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---- 228
           +  R+ F+S+S  +      L  M  DG++ + LT  +D  +   +   +Q KV +    
Sbjct: 226 WQDRLYFISDSDGNDN----LWSMALDGSDAKQLTQFKDWQVRGAQM--DQGKVVFQQGA 279

Query: 229 --ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN----GKRALISVQKDEAM 282
               +D        L         +R  ++    +    S++    G + +I+ +     
Sbjct: 280 DIHVFDIAAAKDALLNIELTSDFAQRREHWVKDPMDYASSTDLALAGDKVVITAR----S 335

Query: 283 DIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKR 340
            +    +  +   ++     +    A  S D   +   SD  G+++++   ++GS   K+
Sbjct: 336 HVAIAGVDGSRLVQVALPGTYRVREAILSQDGKSVYAISDMTGQQEIWQFPADGSSGAKQ 395

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
           +++D          S  G  IA     G    + ++    +  + ++ +     P     
Sbjct: 396 LTKDGHTLRMSLNLSSDGRFIAHDDNDG---NVWLLDLKKNTNQKIITNGEGLGPYADIR 452

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLIN------TPAYASDPQWVGFM 446
           WS  GR +  ++ + G    ++    ++  + ETL +      +P ++SD QW+ F+
Sbjct: 453 WSGDGRFIALTKSEIGKQRPQIVLYSVDENKAETLTSDKYESYSPTFSSDGQWLYFL 509



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 60/154 (38%), Gaps = 10/154 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLT-NTLFINISASYSPDSSQIVFESDR 322
            S +GK            +I+      +   ++LT +   + +S + S D     F +  
Sbjct: 363 LSQDGKSVYAISDMTGQQEIWQFPADGSSGAKQLTKDGHTLRMSLNLSSDGR---FIAHD 419

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKK 378
           +    ++++    +  ++I  + E    Y D  WS  G  IA TK     ++  I +   
Sbjct: 420 DNDGNVWLLDLKKNTNQKIITNGEGLGPYADIRWSGDGRFIALTKSEIGKQRPQIVLYSV 479

Query: 379 DGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
           D ++   L  D     +PT+S  G+ L F   + 
Sbjct: 480 DENKAETLTSDKYESYSPTFSSDGQWLYFLSNRQ 513



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 103/283 (36%), Gaps = 58/283 (20%)

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKF 144
           S     ++   + +F+DW   GAQ+   G+V+ +    + V    +D+   K  ++  + 
Sbjct: 244 SMALDGSDAKQLTQFKDWQVRGAQMD-QGKVVFQQGADIHV----FDIAAAKDALLNIEL 298

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF-----VSESVVSGII---------- 189
            S  A  R+  H + D +  + + +      +++      V+ + V G            
Sbjct: 299 TSDFAQRRE--HWVKDPMDYASSTDLALAGDKVVITARSHVAIAGVDGSRLVQVALPGTY 356

Query: 190 ----------------------KNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKV 226
                                 +  +     DG+   + LT     +      S + + +
Sbjct: 357 RVREAILSQDGKSVYAISDMTGQQEIWQFPADGSSGAKQLTKDGHTLRMSLNLSSDGRFI 416

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDE-- 280
           A+   D      V+L+D + +   K I N     L P    R+S +G+   ++  +    
Sbjct: 417 AHDDNDG----NVWLLDLKKNTNQKIITNGEG--LGPYADIRWSGDGRFIALTKSEIGKQ 470

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
              I    +  N  E LT+  + + S ++S D   + F S+R+
Sbjct: 471 RPQIVLYSVDENKAETLTSDKYESYSPTFSSDGQWLYFLSNRQ 513



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 20/208 (9%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              T   +A  R+ +  +  L    S++GK        + A ++Y + +     +R++  
Sbjct: 53  WTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVYVIPVAGGVAKRVSFE 112

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   ++     +       G    ++++S        +    A   + V   + + 
Sbjct: 113 NSRVRVQGWTAKGEILYSTDSGFGPANNWMLRSVDPKTLTTTDLPLADAVEGVIDDRNEY 172

Query: 361 IAFTKF-------------SGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSL 404
           + FT+F              G K  +   K     E  L+    D +++ P        L
Sbjct: 173 VYFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQD--RL 230

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            F    DG     L+S+ L+G +   + 
Sbjct: 231 YFISDSDG--NDNLWSMALDGSDAKQLT 256



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 69/191 (36%), Gaps = 24/191 (12%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +  + + + D    +++  L   A  RLT+     + A+ S D   + + ++ EG  ++Y
Sbjct: 42  QTLVFTAEGD----LWTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVY 97

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V+   G   KR+S +  +      W+ +G+ I ++  SG   A   M +    + L   D
Sbjct: 98  VIPVAGGVAKRVSFE-NSRVRVQGWTAKGE-ILYSTDSGFGPANNWMLRSVDPKTLTTTD 155

Query: 390 ---SNLQAPTWSPSGRSLIFSRK-----------KDGDTGSKLYSIDLNGRNETLI---N 432
              ++            + F+R              G    +L+   L  + E  +    
Sbjct: 156 LPLADAVEGVIDDRNEYVYFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQ 215

Query: 433 TPAYASDPQ-W 442
                  P  W
Sbjct: 216 HDGSVRQPMLW 226



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 69/213 (32%), Gaps = 25/213 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G        S          S + + VAY   + E    VY++        KR+    S 
Sbjct: 58  GQKAATRLTSLPAEELGATISADGKWVAYVA-NYEGASEVYVIPV-AGGVAKRVSFENSR 115

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQI 316
           +    +++ G   L S           + L+S   + LT T   L   +       +  +
Sbjct: 116 VRVQGWTAKG-EILYSTDSGFGPANNWM-LRSVDPKTLTTTDLPLADAVEGVIDDRNEYV 173

Query: 317 VFES------------DREG-KEQLYVMQSNG-SDQKRISQDKEASYFDPV-WSPQGDLI 361
            F               R G K +L+  +    ++ + +S   + S   P+ W    D +
Sbjct: 174 YFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQ---DRL 230

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            F   S     +  M  DGS  + L +  + Q 
Sbjct: 231 YFISDSDGNDNLWSMALDGSDAKQLTQFKDWQV 263


>gi|258592376|emb|CBE68685.1| protein of unknown function [NC10 bacterium 'Dutch sediment']
          Length = 573

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 91/291 (31%), Gaps = 54/291 (18%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDD---------EDILRVYLMDTRIDRAPKRI 253
           I     S +   F P  S +  ++A+ +  D         +    ++L  T +    +  
Sbjct: 26  IHAQITSTEDETFAPSLSGDGTRIAFVSVYDLIPDSPGNADGNHEIFLWTTGVG-FTQIT 84

Query: 254 GNFRSMILAPRFSSNGKRALISVQKD---------EAMDIYSVDLQSNATERLTNTLFIN 304
                    P  S++G        +D         +      +  + +   ++TNT   +
Sbjct: 85  DTAGGASFEPSLSADGTSIAFRSNRDLTPNEPGNADGNWEIFLWTEGSGFTQITNTTGGD 144

Query: 305 -------ISASYSPDSSQIVFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASY 349
                     S + + ++I F S R        +  +++++  +  S   +I+    ++ 
Sbjct: 145 NIVGGSNSMPSINANGTRIAFRSSRNQISVGFEDINQEIFLW-TEESGLVQITDTIGSAS 203

Query: 350 FDPVWSPQGDLIAFTKFSG-----------EKFAIGVMKKDGSQERLL-VEDSNLQAPTW 397
             P  +  G  IAF   S              + I +  +  S  ++          P+ 
Sbjct: 204 DAPSINADGTRIAFRSTSNLIFPGRPGNADGNYEIFLWTEGSSFIQITNTTGGASFEPSL 263

Query: 398 SPSGRSLIFSRKK------DGDTGSKLYSIDLNGRNETLINTPAYAS-DPQ 441
           S  G  + F   +      + D   +++          + NT    S +P 
Sbjct: 264 SADGTRIAFVSNRNLTPDGNQDGNEEIFLWTTGVGFTQITNTAGGISLEPS 314



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 49/320 (15%), Positives = 104/320 (32%), Gaps = 48/320 (15%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +  F S    + +S  +    + + +    G     +T +     FEP  S +   +A+ 
Sbjct: 48  RIAFVSVYDLIPDSPGNADGNHEIFLWT-TGVGFTQITDTAGGASFEPSLSADGTSIAFR 106

Query: 230 TYDD---------EDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRALIS 275
           +  D         +    ++L                          P  ++NG R    
Sbjct: 107 SNRDLTPNEPGNADGNWEIFLWTEGSGFTQITNTTGGDNIVGGSNSMPSINANGTRIAFR 166

Query: 276 VQKD-------EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFES------- 320
             ++       +      +  + +   ++T+T+   + + S + D ++I F S       
Sbjct: 167 SSRNQISVGFEDINQEIFLWTEESGLVQITDTIGSASDAPSINADGTRIAFRSTSNLIFP 226

Query: 321 ----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-------- 368
               + +G  ++++  + GS   +I+     + F+P  S  G  IAF             
Sbjct: 227 GRPGNADGNYEIFLW-TEGSSFIQITNTTGGASFEPSLSADGTRIAFVSNRNLTPDGNQD 285

Query: 369 EKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               I +        ++          P+ S  G  + F+   D   GS     + +G  
Sbjct: 286 GNEEIFLWTTGVGFTQITNTAGGISLEPSLSADGTRIAFTSYNDLTPGS---PGNADGSE 342

Query: 428 ETLINTPAYASDPQWVGFMD 447
           E  ++T A  + P    F D
Sbjct: 343 EIFLSTQADTT-PALFAFTD 361


>gi|159896754|ref|YP_001543001.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Herpetosiphon aurantiacus ATCC 23779]
 gi|159889793|gb|ABX02873.1| Periplasmic component of the Tol biopolymer transport system-like
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 537

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 100/269 (37%), Gaps = 26/269 (9%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y  +     D  +   FV         K ++ + D DG+N R +   ++       +SP+
Sbjct: 263 YNDLLSWSPDGKTMAFFV-----RDGAKTNIYLADGDGSNSRSVIELQNMAPQSLSWSPD 317

Query: 223 QQKVAYAT----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQ 277
             K A+ T    ++ ++   +Y+ D   +   K++     +   P  +S + +  L +  
Sbjct: 318 SSKFAFITSDIDFETKEDQNLYVYDLASNNE-KQLTTTGLIDFDPLSWSPDNQTILFAAG 376

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FESDREGKEQLYVMQSNG 335
           +D  ++   ++   +   +L +    +  A ++ DS  I   F         + ++    
Sbjct: 377 QDG-IEFNVINADGSNLAKLADVFTSD--AWWTKDSKIIYDDFCDRSNFDRGVCLLDPAT 433

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            + +  +  K   ++    SP  +      ++    ++ ++  D   + L+   S+  + 
Sbjct: 434 GEVE--TLQKIGDFYLSGISPDANWYMLDNYNDG--SLLLINADTGDKELVAPPSSGGSY 489

Query: 396 ------TWSPSGRSLIFSRKKDGDTGSKL 418
                  WSP GR + +     G    ++
Sbjct: 490 EVRVWGKWSPDGRYVTYETIGQGTFIYEI 518



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 67/176 (38%), Gaps = 13/176 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVF-ES 320
            +S +GK     V+     +IY  D   + +  +     +    S S+SPDSS+  F  S
Sbjct: 268 SWSPDGKTMAFFVRDGAKTNIYLADGDGSNSRSVIELQNMAPQ-SLSWSPDSSKFAFITS 326

Query: 321 DRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           D +      + LYV     +++K+++      +    WSP    I F           V+
Sbjct: 327 DIDFETKEDQNLYVYDLASNNEKQLTTTGLIDFDPLSWSPDNQTILFAAGQDG-IEFNVI 385

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNETL 430
             DGS    L +     A  W+   + +   F  + + D G  L      G  ETL
Sbjct: 386 NADGSNLAKLADVFTSDA-WWTKDSKIIYDDFCDRSNFDRGVCLLD-PATGEVETL 439



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 13/173 (7%)

Query: 279 DEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D++ ++    + + +   L      + N   S+SPD   + F      K  +Y+   +GS
Sbjct: 237 DDSFELVRQTMSTGSVSPLDLGGQAYYNDLLSWSPDGKTMAFFVRDGAKTNIYLADGDGS 296

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVEDSN 391
           + + + + +  +     WSP     AF          E   + V     + E+ L     
Sbjct: 297 NSRSVIELQNMAPQSLSWSPDSSKFAFITSDIDFETKEDQNLYVYDLASNNEKQLTTTGL 356

Query: 392 LQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           +     +WSP  ++++F+  +DG   +    I+ +G N   +    + SD  W
Sbjct: 357 IDFDPLSWSPDNQTILFAAGQDGIEFN---VINADGSNLAKLA-DVFTSDAWW 405


>gi|298243316|ref|ZP_06967123.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297556370|gb|EFH90234.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 737

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 73/190 (38%), Gaps = 9/190 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++P+ Q+ A A    E ++ +            ++      + +  +S +GK    S  
Sbjct: 461 SWAPDGQRFAMAEASSEGLITI---GDASGNPLYQLSGHTGKVSSLAWSPDGKYLA-SGS 516

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + I+ V  Q NA  + +      I+ ++SPD   I   +D     Q++  Q     
Sbjct: 517 YDTTVRIWDV-GQQNAIYQYSQHNSRVIALAWSPDGMWIA-SADEHSPVQVWKAQPGSYG 574

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
               + D+        +SP G  +A    +     I  ++   S   L     + QA  W
Sbjct: 575 DGMWTIDQYGPAQALAFSPDGRYLASGHAANHGMVITEVQTRRS---LPPSSGSAQALAW 631

Query: 398 SPSGRSLIFS 407
           SP G+S+ ++
Sbjct: 632 SPDGKSIAYA 641



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/249 (18%), Positives = 80/249 (32%), Gaps = 23/249 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N  Y        +    +SP+ + +A  +YD      V + D     A  +     S +
Sbjct: 487 GNPLYQLSGHTGKVSSLAWSPDGKYLASGSYDT----TVRIWDVGQQNAIYQYSQHNSRV 542

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE 319
           +A  +S +G     S  +   + ++     S      T   +    A ++SPD   +   
Sbjct: 543 IALAWSPDGMWIA-SADEHSPVQVWKAQPGSYGDGMWTIDQYGPAQALAFSPDGRYLA-- 599

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               G    + M       +R       S     WSP G  IA+     ++  I V   +
Sbjct: 600 ---SGHAANHGMVITEVQTRRSLPPSSGSAQALAWSPDGKSIAYA----DEDTIYVGTFE 652

Query: 380 GSQERLLVEDSNLQ----APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL-INTP 434
                 +    + Q    A  WSP G SL        ++  +++++        L I   
Sbjct: 653 NGSITQMFAFRDYQDRVSALAWSPDGESLA---SAHWNSSLQIWNMSSKQVQRALSIPNG 709

Query: 435 AYASDPQWV 443
             A    W 
Sbjct: 710 GVALSLSWS 718



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 75/226 (33%), Gaps = 20/226 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D    N  Y     +  +    +SP+   +A  + D+   ++V+     
Sbjct: 514 SGSYDTTVRIWDVGQQNAIYQYSQHNSRVIALAWSPDGMWIA--SADEHSPVQVWKAQPG 571

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                    +      A  FS +G+              + + +    T R L  +    
Sbjct: 572 SYGDGMWTIDQYGPAQALAFSPDGRYLA-----SGHAANHGMVITEVQTRRSLPPSSGSA 626

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIA 362
            + ++SPD   I +  +    + +YV         ++   ++         WSP G+ +A
Sbjct: 627 QALAWSPDGKSIAYADE----DTIYVGTFENGSITQMFAFRDYQDRVSALAWSPDGESLA 682

Query: 363 FTKFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLI 405
              ++     + +      Q +    +       + +WS + + L 
Sbjct: 683 SAHWNSS---LQIWNMSSKQVQRALSIPNGGVALSLSWSKNNQLLA 725



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 61/193 (31%), Gaps = 12/193 (6%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           G  ++  LA  ++ +G+R  ++    E + I   D   N   +L+       S ++SPD 
Sbjct: 451 GVLQNGALAASWAPDGQRFAMAEASSEGL-ITIGDASGNPLYQLSGHTGKVSSLAWSPDG 509

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +   S       + +      +         +      WSP G  IA +        +
Sbjct: 510 KYLASGSY---DTTVRIWDVGQQNAIYQYSQHNSRVIALAWSPDGMWIA-SADEHSPVQV 565

Query: 374 GVMKKD--GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              +    G     + +    QA  +SP GR L       G   +    I       +L 
Sbjct: 566 WKAQPGSYGDGMWTIDQYGPAQALAFSPDGRYLA-----SGHAANHGMVITEVQTRRSLP 620

Query: 432 NTPAYASDPQWVG 444
            +   A    W  
Sbjct: 621 PSSGSAQALAWSP 633



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 76/253 (30%), Gaps = 38/253 (15%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    R+WDV  +  I    +  S  + R IA   S D    +     D +S +  
Sbjct: 513 ASGSYDTTVRIWDVGQQNAI----YQYSQHNSRVIALAWSPD---GMWIASADEHSPVQV 565

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                  G   + +  +D+ G                  FSP+ + +A + +     + +
Sbjct: 566 --WKAQPGSYGDGMWTIDQYGPAQAL------------AFSPDGRYLA-SGHAANHGMVI 610

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             + TR    P           A  +S +GK    +    +   IY    ++ +  ++  
Sbjct: 611 TEVQTRRSLPP-----SSGSAQALAWSPDGKSIAYA----DEDTIYVGTFENGSITQMFA 661

Query: 300 TLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWS 355
                   S   +SPD   +           L +   +    +R +S           WS
Sbjct: 662 FRDYQDRVSALAWSPDGESLA---SAHWNSSLQIWNMSSKQVQRALSIPNGGVALSLSWS 718

Query: 356 PQGDLIAFTKFSG 368
               L+A     G
Sbjct: 719 KNNQLLASDSVGG 731


>gi|281410805|gb|ADA68815.1| HET-R [Podospora anserina]
          Length = 504

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 96/310 (30%), Gaps = 33/310 (10%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGK--------KFFSSPASWRKIAHTISDDI------ 162
            +     +    ++WD    + +               SP   R  +  + D +      
Sbjct: 186 QRLASGAVDRTVKIWDPASGQCLQTLEGHTGSVSSVAFSPDGQRFASGVVDDTVKIWDPA 245

Query: 163 ----YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                Q++ G +G  +S       +   SG    ++ + D                ++  
Sbjct: 246 SGQCLQTLEGHRGSVSSVAFSPDGQRFASGAGDRTIKIWDPASGQCLQTLEGHRGWVYSV 305

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + Q+ A    DD     V + D    +  + + +    + +  FS +G+R   S  
Sbjct: 306 AFSADGQRFASGAGDD----TVKIWDPASGQCLQTLESHNGSVSSVAFSPDGQRLA-SGA 360

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + I+         + L     +  S ++S D  ++       G + + +       
Sbjct: 361 DDDTVKIWD-PASGQCLQTLEGHKGLVYSVTFSADGQRLA---SGAGDDTVKIWDPASGQ 416

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAP 395
             +  +    S     +SP G   A          + +      Q    +E    ++ + 
Sbjct: 417 CLQTLEGHRGSVHSVAFSPDGQRFASGAVDDT---VKIWDPASGQCLQTLEGHNGSVSSV 473

Query: 396 TWSPSGRSLI 405
            +S  G+ L 
Sbjct: 474 AFSADGQRLA 483



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 74/226 (32%), Gaps = 14/226 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG    ++ + D             +  ++   FS + Q++A    DD     V +
Sbjct: 18  QRLASGAGDRTVKIWDPASGQCLQTLEGHNGSVYSVAFSADGQRLASGAGDD----TVKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +  + +      + +  FS +G+R   S   D+ + I+         + L    
Sbjct: 74  WDPASGQCLQTLEGHNGSVYSVAFSPDGQRLA-SGAVDDTVKIWD-PASGQCLQTLEGHN 131

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++S D  ++       G + + +         +  +    S     +S  G  +
Sbjct: 132 GSVYSVAFSADGQRLA---SGAGDDTVKIWDPASGQCLQTLEGHRGSVSSVAFSADGQRL 188

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
           A +        I        Q    +E    ++ +  +SP G+   
Sbjct: 189 A-SGAVDRTVKIW--DPASGQCLQTLEGHTGSVSSVAFSPDGQRFA 231



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 68/203 (33%), Gaps = 18/203 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  ++   FS + Q++A    D      V + D    +  + +      + +  FS
Sbjct: 1   LEGHNGSVYSVAFSADGQRLASGAGDR----TVKIWDPASGQCLQTLEGHNGSVYSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK- 325
           ++G+R   S   D+ + I+         + L        S ++SPD  ++       G  
Sbjct: 57  ADGQRLA-SGAGDDTVKIWD-PASGQCLQTLEGHNGSVYSVAFSPDGQRLA-----SGAV 109

Query: 326 -EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +         +  +    S +   +S  G  +A          + +      Q  
Sbjct: 110 DDTVKIWDPASGQCLQTLEGHNGSVYSVAFSADGQRLA---SGAGDDTVKIWDPASGQCL 166

Query: 385 LLVED--SNLQAPTWSPSGRSLI 405
             +E    ++ +  +S  G+ L 
Sbjct: 167 QTLEGHRGSVSSVAFSADGQRLA 189



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 56/170 (32%), Gaps = 13/170 (7%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      + +  FS++G+R   S   D  + I+         + L        S ++S D
Sbjct: 1   LEGHNGSVYSVAFSADGQRLA-SGAGDRTVKIWD-PASGQCLQTLEGHNGSVYSVAFSAD 58

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             ++       G + + +         +  +    S +   +SP G  +A          
Sbjct: 59  GQRLA---SGAGDDTVKIWDPASGQCLQTLEGHNGSVYSVAFSPDGQRLASGAVDDT--- 112

Query: 373 IGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + +      Q    +E    ++ +  +S  G+ L       GD   K++ 
Sbjct: 113 VKIWDPASGQCLQTLEGHNGSVYSVAFSADGQRLA---SGAGDDTVKIWD 159


>gi|75906264|ref|YP_320560.1| peptidase C14 [Anabaena variabilis ATCC 29413]
 gi|75699989|gb|ABA19665.1| Peptidase C14, caspase catalytic subunit p20 [Anabaena variabilis
            ATCC 29413]
          Length = 1686

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 92/237 (38%), Gaps = 17/237 (7%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            RDG  ++ L    D  + +  FSP+ + +A A+ D+     + L +    +  + +    
Sbjct: 1437 RDGQLLKTLI-GHDNEVNKVNFSPDGKAIASASRDN----TIKLWNVSDGKLKQILKGHT 1491

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              +    FS +GK    S   D+ + ++   +  N  + L     +  S ++SPD S + 
Sbjct: 1492 EEVFWVSFSPDGKIIA-SASADKTIRLWD-SVSGNLIKSLPAHNDLVYSVNFSPDGSMLA 1549

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              S     + + + +S                +   +SP G  IA          + + +
Sbjct: 1550 STS---ADKTVKLWRSQDGHLLHTFSGHSDVVYSSSFSPDGRYIASASEDKT---VKIWQ 1603

Query: 378  KDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             DG     L    + + +  +SP G++LI       DT +K++  D      + INT
Sbjct: 1604 LDGHLLTTLPQHQAGVMSAIFSPDGKTLI---SGSLDTTTKIWRFDSQQAQTSQINT 1657



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 91/254 (35%), Gaps = 18/254 (7%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             + G  +  I    +++ SG +  ++ +  RDG  +       +  ++   FSP+ Q +A
Sbjct: 1074 HKDGVISISISGDGQTIASGGLDKTIKLWSRDG-RLFRTLNGHEDAVYSVSFSPDGQTIA 1132

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                       + L  T      K I      +    FS +GK    S   D ++ ++  
Sbjct: 1133 ----SGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVNFSPDGKTLA-SASSDHSIKLW-- 1185

Query: 288  DLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D  S      L       IS  +SPD   I   S+    + + +         +     +
Sbjct: 1186 DSTSGQLLMTLNGHSAGVISVRFSPDGQTIASASE---DKTVKLWHRQDGKLLKTLNGHQ 1242

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
                   +SP G  +A +  + +   +  +  DG   + L   + ++    +S  G+++ 
Sbjct: 1243 DWVNSLSFSPDGKTLA-SASADKTIKLWRI-ADGKLVKTLKGHNDSVWDVNFSQDGKAIA 1300

Query: 406  FSRKKDGDTGSKLY 419
             + +   D   KL+
Sbjct: 1301 SASR---DNTIKLW 1311



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 83/238 (34%), Gaps = 15/238 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ S    +S+ + D     +          +   RFSP+ Q +A A+ D      V L
Sbjct: 1171 KTLASASSDHSIKLWDSTSGQLLMTLNGHSAGVISVRFSPDGQTIASASEDK----TVKL 1226

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
               +  +  K +   +  + +  FS +GK    S   D+ + ++ +       + L    
Sbjct: 1227 WHRQDGKLLKTLNGHQDWVNSLSFSPDGKTLA-SASADKTIKLWRI-ADGKLVKTLKGHN 1284

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  ++S D   I   S       + +   +G + +  +       +   + P G  +
Sbjct: 1285 DSVWDVNFSQDGKAIASASR---DNTIKLWNRHGIELETFT-GHSGGVYAVNFLPDGKTL 1340

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            A          +   +   S   +L  +S + A ++SP G  +        D   +L+
Sbjct: 1341 ASASLDNT-IRLW-QRPLISPLEVLAGNSGVYALSFSPDGSIIA---TAGADGKIQLW 1393



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 52/346 (15%), Positives = 124/346 (35%), Gaps = 31/346 (8%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
            ++     + I +       + WN  G ++               V F    + D K +  
Sbjct: 1290 VNFSQDGKAIASASRDNTIKLWNRHGIELE---TFTGHSGGVYAVNF----LPDGKTLAS 1342

Query: 142  KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDG 200
                ++   W++    IS    + + G  G +          + +      + +   +DG
Sbjct: 1343 ASLDNTIRLWQR--PLISP--LEVLAGNSGVYALSFSPDGSIIATAGADGKIQLWHSQDG 1398

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            + ++ L    ++ ++   F+P    +A A  D      V +   R  +  K +    + +
Sbjct: 1399 SLLKTLP--GNKAIYGISFTPQGDLIASANADK----TVKIWRVRDGQLLKTLIGHDNEV 1452

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE 319
                FS +GK    S  +D  + ++  ++     +++       +   S+SPD   I   
Sbjct: 1453 NKVNFSPDGKAIA-SASRDNTIKLW--NVSDGKLKQILKGHTEEVFWVSFSPDGKIIASA 1509

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            S     + + +  S   +  +         +   +SP G ++A T  + +   +    +D
Sbjct: 1510 S---ADKTIRLWDSVSGNLIKSLPAHNDLVYSVNFSPDGSMLASTS-ADKTVKLWR-SQD 1564

Query: 380  GSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            G         S+ + + ++SP GR +  + +   D   K++ +D +
Sbjct: 1565 GHLLHTFSGHSDVVYSSSFSPDGRYIASASE---DKTVKIWQLDGH 1607



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 64/362 (17%), Positives = 128/362 (35%), Gaps = 86/362 (23%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              +LWD    + ++               H+             G  + R     +++ S
Sbjct: 1181 SIKLWDSTSGQLLMTLN-----------GHSA------------GVISVRFSPDGQTIAS 1217

Query: 187  GIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                 ++ +   +DG  ++ L   +D +     FSP+ + +A A+ D      + L    
Sbjct: 1218 ASEDKTVKLWHRQDGKLLKTLNGHQDWVNSL-SFSPDGKTLASASADK----TIKLWRIA 1272

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--- 302
              +  K +      +    FS +GK    S  +D  + ++  +      E  T       
Sbjct: 1273 DGKLVKTLKGHNDSVWDVNFSQDGKAIA-SASRDNTIKLW--NRHGIELETFTGHSGGVY 1329

Query: 303  ----------------INI---------SA-------------SYSPDSSQIVFESDREG 324
                             N          S              S+SPD S I   +  +G
Sbjct: 1330 AVNFLPDGKTLASASLDNTIRLWQRPLISPLEVLAGNSGVYALSFSPDGSIIA-TAGADG 1388

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            K QL+    +GS  K  +     + +   ++PQGDLIA +  + +   I  ++ DG   +
Sbjct: 1389 KIQLW-HSQDGSLLK--TLPGNKAIYGISFTPQGDLIA-SANADKTVKIWRVR-DGQLLK 1443

Query: 385  LLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             L+  D+ +    +SP G+++  + +   D   KL+++  +G+ + ++          WV
Sbjct: 1444 TLIGHDNEVNKVNFSPDGKAIASASR---DNTIKLWNVS-DGKLKQILKGHTEEVF--WV 1497

Query: 444  GF 445
             F
Sbjct: 1498 SF 1499



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 75/204 (36%), Gaps = 12/204 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S    N++ + +     ++ +     + +F   FSP+ + +A A+ D      + L D+ 
Sbjct: 1466 SASRDNTIKLWNVSDGKLKQILKGHTEEVFWVSFSPDGKIIASASADK----TIRLWDSV 1521

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 K +     ++ +  FS +G     S   D+ + ++      +     +    +  
Sbjct: 1522 SGNLIKSLPAHNDLVYSVNFSPDGSMLA-STSADKTVKLWR-SQDGHLLHTFSGHSDVVY 1579

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S+S+SPD   I   S+    + + + Q +G     +    +A     ++SP G  +    
Sbjct: 1580 SSSFSPDGRYIASASE---DKTVKIWQLDGHLLTTL-PQHQAGVMSAIFSPDGKTLISGS 1635

Query: 366  FSGEK--FAIGVMKKDGSQERLLV 387
                   +     +   SQ   LV
Sbjct: 1636 LDTTTKIWRFDSQQAQTSQINTLV 1659


>gi|17227974|ref|NP_484522.1| WD-40 repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17129823|dbj|BAB72436.1| WD-40 repeat protein [Nostoc sp. PCC 7120]
          Length = 1708

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 67/360 (18%), Positives = 132/360 (36%), Gaps = 45/360 (12%)

Query: 85   DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
                + I +       + W+  G   L+ G +         V F      D +       
Sbjct: 1320 SPNGETIGSASIDATLKLWSPQG---LLLGTLKGHNSWVNSVSFS----PDGRIFASGSR 1372

Query: 145  FSSPASWRKIAHTISDDIYQSITGEKG-DFNSRILFVSE--SVVSGIIKNSLCVMDRDGA 201
              +   WR       D++        G D+ + I F S+  ++ +     ++ ++ R G 
Sbjct: 1373 DKTVTLWRW------DEVLLRNPKGDGNDWVTSISFSSDGETLAAASRDQTVKILSRHGK 1426

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             +          ++   +SPN+Q +A A+ D    ++++  D +I      +   +  +L
Sbjct: 1427 -LLNTFKGHTGSIWGVAWSPNRQMIASASKD--QTVKLWHQDGKILHT---LQGHQDAVL 1480

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIV 317
            A  +SS+ +    S  KD+ + I+S   Q     +L +TL  +  A    S+SPD   + 
Sbjct: 1481 AVAWSSDSQVIA-SAGKDKIVKIWS---QGG---QLLHTLQGHTDAVNWVSFSPDGKLLA 1533

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              SD    +    + S         ++         WSP G ++A     G    + +  
Sbjct: 1534 SVSD----DTTVKLWSRDGQLLHTLKEHSRRVNGVAWSPDGQILASASIDGT---VKLWN 1586

Query: 378  KDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLIN 432
            +DGS  R L  D +   + ++SP G+ L  +           G+ L  +  +    T + 
Sbjct: 1587 RDGSLSRNLPGDGDSFISVSFSPDGKMLAANSDDQIRLWNQKGTLLMVLKGDKDELTSVT 1646



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 92/256 (35%), Gaps = 27/256 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ +   D   +R      +  +    FS + + +A A+ D    +++      
Sbjct: 1369 SGSRDKTVTLWRWDEVLLRNPKGDGNDWVTSISFSSDGETLAAASRD--QTVKI------ 1420

Query: 246  IDRAPKRIGNFRSMILA---PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            + R  K +  F+    +     +S N +    S  KD+ + ++  D        L     
Sbjct: 1421 LSRHGKLLNTFKGHTGSIWGVAWSPNRQMIA-SASKDQTVKLWHQD--GKILHTLQGHQD 1477

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              ++ ++S DS  I       GK+++  + S G       Q    +     +SP G L+A
Sbjct: 1478 AVLAVAWSSDSQVIA----SAGKDKIVKIWSQGGQLLHTLQGHTDAVNWVSFSPDGKLLA 1533

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                      + +  +DG     L E    +    WSP G+ L  S   DG    KL+  
Sbjct: 1534 SVSDDTT---VKLWSRDGQLLHTLKEHSRRVNGVAWSPDGQILA-SASIDGTV--KLW-- 1585

Query: 422  DLNGRNETLINTPAYA 437
            + +G     +     +
Sbjct: 1586 NRDGSLSRNLPGDGDS 1601



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 86/242 (35%), Gaps = 19/242 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ S     ++ + +RDG  ++      D  +    +SP  + +A A++D      + L
Sbjct: 1242 QTLASVGADKNIKLWNRDGKLLKTW-QGHDDAILGVAWSPKGETIATASFDQ----TIKL 1296

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             + R     K +    + + A  FS NG+    S   D  + ++S   Q      L    
Sbjct: 1297 WN-RQGNLLKTLSGHTAGVTAVTFSPNGETIG-SASIDATLKLWS--PQGLLLGTLKGHN 1352

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S S+SPD       S R+    L+         +    D         +S  G+ +
Sbjct: 1353 SWVNSVSFSPDGRIFASGS-RDKTVTLWRWDEV--LLRNPKGDGNDWVTSISFSSDGETL 1409

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A          + ++ + G           ++    WSP+ + +  + K   D   KL+ 
Sbjct: 1410 AAASRDQT---VKILSRHGKLLNTFKGHTGSIWGVAWSPNRQMIASASK---DQTVKLWH 1463

Query: 421  ID 422
             D
Sbjct: 1464 QD 1465



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/260 (16%), Positives = 94/260 (36%), Gaps = 28/260 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ + +R G  +         ++    FSP+   +A  + D    ++++   +R
Sbjct: 1164 SASQDKTVKLWNRVGQ-LVTTLQGHGDVVNNASFSPDGSLIASGSSD--KTVKLW---SR 1217

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +    +      +L   ++ +G+    SV  D+ + ++  +      +         +
Sbjct: 1218 EGKLLNTLSGHNDAVLGIAWTPDGQTLA-SVGADKNIKLW--NRDGKLLKTWQGHDDAIL 1274

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              ++SP    I   S     + + +    G+  K +S    A      +SP G+ I    
Sbjct: 1275 GVAWSPKGETIATASF---DQTIKLWNRQGNLLKTLS-GHTAGVTAVTFSPNGETIGSAS 1330

Query: 366  FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                   + +    G     L   +S + + ++SP GR  IF+      T + L+  D  
Sbjct: 1331 IDAT---LKLWSPQGLLLGTLKGHNSWVNSVSFSPDGR--IFASGSRDKTVT-LWRWD-- 1382

Query: 425  GRNETLINTP-AYASDPQWV 443
               E L+  P    +D  WV
Sbjct: 1383 ---EVLLRNPKGDGND--WV 1397



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 79/214 (36%), Gaps = 13/214 (6%)

Query: 162  IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            I  ++ G +    +        V++   K+ +  +   G  + +        +    FSP
Sbjct: 1468 ILHTLQGHQDAVLAVAWSSDSQVIASAGKDKIVKIWSQGGQLLHTLQGHTDAVNWVSFSP 1527

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + + +A  + D      V L  +R  +    +      +    +S +G + L S   D  
Sbjct: 1528 DGKLLASVSDDT----TVKLW-SRDGQLLHTLKEHSRRVNGVAWSPDG-QILASASIDGT 1581

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            + ++  +   + +  L       IS S+SPD   +   SD    +Q+ +    G+    +
Sbjct: 1582 VKLW--NRDGSLSRNLPGDGDSFISVSFSPDGKMLAANSD----DQIRLWNQKGTLLMVL 1635

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              DK+       +SP   ++A    +G+   + +
Sbjct: 1636 KGDKD-ELTSVTFSPDSQILAVGGGNGKVIFLNL 1668



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 16/210 (7%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G             +    FSP+   +A A+ D+     + L  +        +    ++
Sbjct: 1095 GVREYNRLEGHTAGVNSAVFSPDGSLIASASADN----TINLWRSD-GSLINTLSKHTNV 1149

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + +  FS +      S  +D+ + ++  +        L     +  +AS+SPD S I   
Sbjct: 1150 VNSVNFSPDALLIA-SASQDKTVKLW--NRVGQLVTTLQGHGDVVNNASFSPDGSLIASG 1206

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            S     + + +    G     +S     +     W+P G  +A     G    I +  +D
Sbjct: 1207 SS---DKTVKLWSREGKLLNTLS-GHNDAVLGIAWTPDGQTLASV---GADKNIKLWNRD 1259

Query: 380  GSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
            G   +     D  +    WSP G ++  + 
Sbjct: 1260 GKLLKTWQGHDDAILGVAWSPKGETIATAS 1289



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 74/227 (32%), Gaps = 23/227 (10%)

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            Q+ +    Y  E +           R   R+    + + +  FS +G     S   D  +
Sbjct: 1072 QRAIWVDPYTREQVQTALYQAVVGVREYNRLEGHTAGVNSAVFSPDGSLIA-SASADNTI 1130

Query: 283  DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +++  D   +    L+    +  S ++SPD+  I   S     ++   + +         
Sbjct: 1131 NLWRSD--GSLINTLSKHTNVVNSVNFSPDALLIASASQ----DKTVKLWNRVGQLVTTL 1184

Query: 343  QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAP---TWS 398
            Q       +  +SP G LIA             +K    + +LL     +  A     W+
Sbjct: 1185 QGHGDVVNNASFSPDGSLIASGSSDK------TVKLWSREGKLLNTLSGHNDAVLGIAWT 1238

Query: 399  PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
            P G++L        D   KL+  + +G+          A     W  
Sbjct: 1239 PDGQTLA---SVGADKNIKLW--NRDGKLLKTWQGHDDAILGVAWSP 1280


>gi|322703072|gb|EFY94687.1| NACHT and WD40 domain protein [Metarhizium anisopliae ARSEF 23]
          Length = 1673

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 76/244 (31%), Gaps = 25/244 (10%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             R +       +    FSP+   +A A+ D      V L D       + +      + A
Sbjct: 1100 HRQILEGHGSEVKAVAFSPDDNAIASASSDS----TVRLWDAATGTCRRSLSGHCGNVCA 1155

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESD 321
              FS +      S   D ++ ++     + A    L    +   S ++SPD   I   S 
Sbjct: 1156 VAFSPDSSMVA-SASSDCSIRLWV--AATGACRCALEGHKYWVSSVTFSPDGKMIASAS- 1211

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              G   + +  +     ++  +    S     +S  G L+A          + +      
Sbjct: 1212 --GDHTVRLWDAATGAHQQTLEGHRRSVTAVAFSHDGKLVASASVDRT---VRLWDVTTG 1266

Query: 382  QERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
              +  +     ++ A T+SP    +       GD   +L+        +TL         
Sbjct: 1267 AYQQTLTGHSRSINAVTFSPDDSIVA---SASGDCTVRLWDATTGAHKQTL------KGH 1317

Query: 440  PQWV 443
              W+
Sbjct: 1318 GSWI 1321



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 88/244 (36%), Gaps = 20/244 (8%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S  V S     S+ +        R         +    FSP+ + +A A+ D      V 
Sbjct: 1162 SSMVASASSDCSIRLWVAATGACRCALEGHKYWVSSVTFSPDGKMIASASGDH----TVR 1217

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT- 298
            L D       + +   R  + A  FS +GK    S   D  + ++  D+ + A ++ LT 
Sbjct: 1218 LWDAATGAHQQTLEGHRRSVTAVAFSHDGKLVA-SASVDRTVRLW--DVTTGAYQQTLTG 1274

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            ++  IN   ++SPD S +   S   G   + +  +     K+  +   +     ++S  G
Sbjct: 1275 HSRSINAV-TFSPDDSIVASAS---GDCTVRLWDATTGAHKQTLKGHGSWINAVIFSLDG 1330

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSK 417
             LIA          I +        R  ++  + +    +S  G+ +        D   +
Sbjct: 1331 MLIASASHDCT---IRLWDATTGVLRETLDGRHRVNDVAFSADGKIIA---SASADGTVR 1384

Query: 418  LYSI 421
            L+ +
Sbjct: 1385 LWDV 1388



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 99/304 (32%), Gaps = 41/304 (13%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             RLWD      ++ +             H ++D  + +        + +I+       S 
Sbjct: 1342 IRLWDATTG--VLRETLDGR--------HRVNDVAFSA--------DGKII------ASA 1377

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                ++ + D      R         +    FS +   VA A+ D      V L D    
Sbjct: 1378 SADGTVRLWDVASLAYRQTPTGHTHCVNAIDFSYDGTIVASASGD----CTVRLWDASTG 1433

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
               + +      +    FS   K    S   D  + ++  +  + + E++      +I A
Sbjct: 1434 ECRQIVEGHNGSVNTVAFSPCSKMLA-SASSDRHVRLW--NATTGSCEQILQGHISDIKA 1490

Query: 308  -SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             ++SPD S     SD      + +        ++             +SP G ++A +  
Sbjct: 1491 IAFSPDGSVAASASD---DCTIRLWNVATGAHQQTLDGYSGEVKAIAFSPDGKVVALSLS 1547

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             G      +       +  L++  +      SP G+  I +   D  +  +L+  ++ G 
Sbjct: 1548 DG---IPWLWDVATGAQWQLIQGGDSAPMALSPDGK--ISASASDDGSTIRLWD-EVAGA 1601

Query: 427  NETL 430
            ++ L
Sbjct: 1602 HQQL 1605



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 96/294 (32%), Gaps = 32/294 (10%)

Query: 161  DIYQSITGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            D ++ I    G     + F  +     S    +++ + D      R         +    
Sbjct: 1098 DAHRQILEGHGSEVKAVAFSPDDNAIASASSDSTVRLWDAATGTCRRSLSGHCGNVCAVA 1157

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+   VA A+ D      + L           +   +  + +  FS +GK    S   
Sbjct: 1158 FSPDSSMVASASSD----CSIRLWVAATGACRCALEGHKYWVSSVTFSPDGKMIA-SASG 1212

Query: 279  DEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGS 336
            D  + ++  D  + A ++ L        + ++S D   +   S DR     + +      
Sbjct: 1213 DHTVRLW--DAATGAHQQTLEGHRRSVTAVAFSHDGKLVASASVDRT----VRLWDVTTG 1266

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQA 394
              ++       S     +SP   ++A          + +        +  +    S + A
Sbjct: 1267 AYQQTLTGHSRSINAVTFSPDDSIVASAS---GDCTVRLWDATTGAHKQTLKGHGSWINA 1323

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSI-------DLNGRNETLINTPAYASDPQ 441
              +S  G  +  +     D   +L+          L+GR+   +N  A+++D +
Sbjct: 1324 VIFSLDGMLIASASH---DCTIRLWDATTGVLRETLDGRH--RVNDVAFSADGK 1372



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 69/209 (33%), Gaps = 15/209 (7%)

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            A+       I  V  +    D   + +    S + A  FS +      S   D  + ++ 
Sbjct: 1078 AHWQERLPFIQTVAGVRNHWDAHRQILEGHGSEVKAVAFSPDDNAIA-SASSDSTVRLW- 1135

Query: 287  VDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             D  +    R L+       + ++SPDSS +   S       + +  +     +   +  
Sbjct: 1136 -DAATGTCRRSLSGHCGNVCAVAFSPDSSMVASASS---DCSIRLWVAATGACRCALEGH 1191

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRS 403
            +       +SP G +IA          + +        +  +E    ++ A  +S  G+ 
Sbjct: 1192 KYWVSSVTFSPDGKMIASAS---GDHTVRLWDAATGAHQQTLEGHRRSVTAVAFSHDGKL 1248

Query: 404  LIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +  +     D   +L+ +      +TL  
Sbjct: 1249 VASASV---DRTVRLWDVTTGAYQQTLTG 1274


>gi|315269560|gb|ADT96413.1| WD40-like beta Propeller containing protein [Shewanella baltica
           OS678]
          Length = 673

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 54/327 (16%), Positives = 111/327 (33%), Gaps = 66/327 (20%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I+           K S  +   DG + R +T  +   + EP FSP+ + +A+ +  +ED
Sbjct: 48  HIIAPVTEYDLKADKGSTQLWRFDGKHNRAITA-KGLRVSEPVFSPDGKFLAFVSQRNED 106

Query: 236 -ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-------------------- 274
              ++YL+        +R+ +  + + + ++   GK                        
Sbjct: 107 EASQIYLLPMDGPGEAQRLTDIPTGVNSIKW--VGKHLYFISNIFPNQSWEEMKTQLTTD 164

Query: 275 --------------------SVQKDEAMDIYSVDLQSNATERLTNTLF------INISAS 308
                                + +     ++ +  +    E +T             SAS
Sbjct: 165 TDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHELPRSDQSSAS 224

Query: 309 Y--SPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           Y  SP+   I F       +      +++    G+  + ++ D +A   +P +SP G  +
Sbjct: 225 YDVSPNERWIAFNVYGSENKVDPKIDIFLATIGGNKAENLTADNQAPDLNPSFSPNGKTL 284

Query: 362 AFTKFSGEKF-----AIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDT 414
           AFT+     F      + ++  D  +   L  D +  +   +W+P  +   F    +   
Sbjct: 285 AFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTPDNKG--FYATVEDAA 342

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQ 441
            +++YSID        I      S P 
Sbjct: 343 TNRIYSIDAKNGKVKAITEATDFSQPA 369



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 98/295 (33%), Gaps = 72/295 (24%)

Query: 217 PRFSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  SP  + +      Y    D+   +++  D    +  + I      +  P FS +GK 
Sbjct: 40  PIVSPTGEHIIAPVTEYDLKADKGSTQLWRFD---GKHNRAITAKGLRVSEPVFSPDGKF 96

Query: 272 ALISVQK--DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-------- 320
                Q+  DEA  IY + +      +RLT+      S  +      + F S        
Sbjct: 97  LAFVSQRNEDEASQIYLLPMDGPGEAQRLTDIPTGVNSIKWV--GKHLYFISNIFPNQSW 154

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQ----- 343
                                           D   +  ++ + + G + + I+Q     
Sbjct: 155 EEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPAGHE 214

Query: 344 --DKEASYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLVEDSN--LQA 394
               + S      SP    IAF  +  E        I +    G++   L  D+      
Sbjct: 215 LPRSDQSSASYDVSPNERWIAFNVYGSENKVDPKIDIFLATIGGNKAENLTADNQAPDLN 274

Query: 395 PTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
           P++SP+G++L F+R+K        S+L  +D++ R  T + +      S   W  
Sbjct: 275 PSFSPNGKTLAFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSDWDRSVSQFSWTP 329



 Score = 75.4 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 85/267 (31%), Gaps = 17/267 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            + F+S    +   +     +  D  N             +     ++++ A+       
Sbjct: 141 HLYFISNIFPNQSWEEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAK 200

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-----QKDEAMDIYSVDLQ 290
              V  +         R         +   S N +    +V     + D  +DI+   + 
Sbjct: 201 GGNVENITQPAGHELPR---SDQSSASYDVSPNERWIAFNVYGSENKVDPKIDIFLATIG 257

Query: 291 SNATERLT-NTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKRISQD 344
            N  E LT +    +++ S+SP+   + F   +         +L ++  +      ++ D
Sbjct: 258 GNKAENLTADNQAPDLNPSFSPNGKTLAFTRQKIPGFYADTSRLMLLDIDSRKLTTLTSD 317

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S     W+P       T        I  +     + + + E ++   P     G  +
Sbjct: 318 WDRSVSQFSWTPDNKGFYATVEDAATNRIYSIDAKNGKVKAITEATDFSQPAIGKDGELI 377

Query: 405 IFSRKKDGDTGSKLYSID-LNGRNETL 430
                +     ++L SI+  NG+ E L
Sbjct: 378 A--TNQSFLYPARLVSINPRNGKIERL 402



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 68/248 (27%), Gaps = 68/248 (27%)

Query: 260 ILAPRFSSNGKRAL-----ISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +P  S  G+  +       ++ D  +  ++  D        +T          +SPD 
Sbjct: 37  IGSPIVSPTGEHIIAPVTEYDLKADKGSTQLWRFD--GKHNRAITAKGLRVSEPVFSPDG 94

Query: 314 SQIVFESDR--EGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
             + F S R  +   Q+Y++  +G  + +R++ D         W   G  + F       
Sbjct: 95  KFLAFVSQRNEDEASQIYLLPMDGPGEAQRLT-DIPTGVNSIKWV--GKHLYFISNIFPN 151

Query: 367 ------------------------------------SGEKFAIGVMKKDGSQERLLVEDS 390
                                                  +  +  +   G     + + +
Sbjct: 152 QSWEEMKTQLTTDTDNKVSAHQWNALPYSQFDHWLDERRQAHVFRIPAKGGNVENITQPA 211

Query: 391 NLQAPT---------WSPSGRSLIF---SRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             + P           SP+ R + F     +   D    ++   + G     +     A 
Sbjct: 212 GHELPRSDQSSASYDVSPNERWIAFNVYGSENKVDPKIDIFLATIGGNKAENLTADNQAP 271

Query: 439 D--PQWVG 444
           D  P +  
Sbjct: 272 DLNPSFSP 279


>gi|290956167|ref|YP_003487349.1| hypothetical protein SCAB_16491 [Streptomyces scabiei 87.22]
 gi|260645693|emb|CBG68784.1| putative WD-40 repeat protein [Streptomyces scabiei 87.22]
          Length = 1298

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 69/346 (19%), Positives = 118/346 (34%), Gaps = 47/346 (13%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
             V   G DR     RLWDV D +Q     F  S      +  T        + G  GD  
Sbjct: 868  TVASAGVDR---TVRLWDVADGRQ--TDTFTGSSDDINDVVFTPDGTT---VVGAVGDGT 919

Query: 175  SRILFVSESVVS----GIIKNSLCV-MDRDGA----------------NIRYLTPSRDQI 213
            +R+  V     +    G     L V +  DGA                    LT      
Sbjct: 920  TRLWDVRSGRQTLVLAGHTDYVLGVAVTSDGALLATAGFDQSVVLWDLGGAVLTSRPFTE 979

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +++  +SP+ + +A A  D      V L D         +      + +  FS +G+   
Sbjct: 980  VWQTAYSPDGKLLATADADH----TVRLWDAATHALVAALRGHTETVFSVAFSPDGRTLA 1035

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             S   D  + ++ V  +  A ++LT       S ++SPD   +           + +   
Sbjct: 1036 -SAGSDGTVRLWDV-AEHEALKKLTGHEGQVFSVAFSPDGRTLAST---GADHTVRLWDV 1090

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSN 391
                Q  +    +    D  +SP G  +A    +G+   + +      +ER  L      
Sbjct: 1091 ARRRQLGVFHGHKDFVNDVAFSPDGRTLA---TAGDDLTVRLWNVASHRERATLTGHSGA 1147

Query: 392  LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            ++   +SP GR+L        D   +L+ +  + R ET +   + A
Sbjct: 1148 VRGVAFSPDGRTLA---SSGNDGSVRLWDVR-HRRFETALTGHSGA 1189



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 89/263 (33%), Gaps = 27/263 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +    +++ + D     +        + +F   FSP+ + +A           V L D  
Sbjct: 994  TADADHTVRLWDAATHALVAALRGHTETVFSVAFSPDGRTLA----SAGSDGTVRLWDVA 1049

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--- 302
               A K++      + +  FS +G+    S   D  + ++ V        +L        
Sbjct: 1050 EHEALKKLTGHEGQVFSVAFSPDGRTLA-STGADHTVRLWDV----ARRRQLGVFHGHKD 1104

Query: 303  --INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               ++  ++SPD   +    D      + +       ++        +     +SP G  
Sbjct: 1105 FVNDV--AFSPDGRTLATAGD---DLTVRLWNVASHRERATLTGHSGAVRGVAFSPDGRT 1159

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +A +  +     +  ++    +  L      ++   +SP GR+L+       D   +L+ 
Sbjct: 1160 LA-SSGNDGSVRLWDVRHRRFETALTGHSGAVRGVDFSPDGRTLV---SSGNDRTVRLW- 1214

Query: 421  IDLNGRNETLINTPAYASDPQWV 443
             D+ GR   +  T    ++  W 
Sbjct: 1215 -DVAGR--RVWATLTGHTNAVWG 1234



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 80/243 (32%), Gaps = 17/243 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++ S     ++ + D             +  +F   FSP+ + +A    D      V L
Sbjct: 1032 RTLASAGSDGTVRLWDVAEHEALKKLTGHEGQVFSVAFSPDGRTLASTGADH----TVRL 1087

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D    R        +  +    FS +G+    +   D  + +++V         LT   
Sbjct: 1088 WDVARRRQLGVFHGHKDFVNDVAFSPDGRTLA-TAGDDLTVRLWNV-ASHRERATLTGHS 1145

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  ++SPD   +   S  +G  +L+         +        +     +SP G  +
Sbjct: 1146 GAVRGVAFSPDGRTLA-SSGNDGSVRLW--DVRHRRFETALTGHSGAVRGVDFSPDGRTL 1202

Query: 362  AFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                 SG    + +    G +    L    + +    ++P GR++  S     D   +L+
Sbjct: 1203 V---SSGNDRTVRLWDVAGRRVWATLTGHTNAVWGVDFAPDGRTVASSST---DGTVRLW 1256

Query: 420  SID 422
             +D
Sbjct: 1257 DLD 1259



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 81/227 (35%), Gaps = 27/227 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  + +  F+P+ + +A A+ D      V L +T               + +  FS
Sbjct: 681 LAGHRGPVNQVAFAPDDRTLATASSDG----TVVLRETADGHRVLARFTVPGRVRSVAFS 736

Query: 267 SNGKRALISVQKDEAMDIYSVD--LQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           ++G+   ++   D  + ++S     ++    + T      +   + P    +   +  +G
Sbjct: 737 TDGRTLAVTST-DGPVTLWSTTGHRRTGTLPKATKGARAVV---FDPRGGTLA-VAAADG 791

Query: 325 KEQLYVMQSNGSDQKRIS---QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             QL+    +   + R +      E       ++P G  +A    +G    + +   D +
Sbjct: 792 NVQLW----DTGTRPRRTATLPGHEGDVNALAYAPDGRTLA---SAGTDRDVRLWDTDRA 844

Query: 382 QERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +    +E    +     +SP GR++        D   +L+ +  +GR
Sbjct: 845 RVADTLEGHADEVLGVAFSPDGRTVA---SAGVDRTVRLWDV-ADGR 887



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 80/265 (30%), Gaps = 20/265 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++ S      + + D D A +          +    FSP+ + VA A  D      V L
Sbjct: 825  RTLASAGTDRDVRLWDTDRARVADTLEGHADEVLGVAFSPDGRTVASAGVDR----TVRL 880

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D    R           I    F+ +G   ++    D    ++ V      T  L    
Sbjct: 881  WDVADGRQTDTFTGSSDDINDVVFTPDGTT-VVGAVGDGTTRLWDV-RSGRQTLVLAGHT 938

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +  + + D + +       G +Q  V+   G     ++       +   +SP G L+
Sbjct: 939  DYVLGVAVTSDGALLA----TAGFDQSVVLWDLGGAV--LTSRPFTEVWQTAYSPDGKLL 992

Query: 362  AFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            A    +     + +           L      + +  +SP GR+L        D   +L+
Sbjct: 993  A---TADADHTVRLWDAATHALVAALRGHTETVFSVAFSPDGRTLA---SAGSDGTVRLW 1046

Query: 420  SIDLNGRNETLINTPAYASDPQWVG 444
             +  +   + L           +  
Sbjct: 1047 DVAEHEALKKLTGHEGQVFSVAFSP 1071



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 54/179 (30%), Gaps = 24/179 (13%)

Query: 129  RLWDVKDRKQII-----------------GKKFFSSPASWR-KIAHTISDDIYQSITGEK 170
            RLWDV  R+Q+                  G+   ++      ++ +  S     ++TG  
Sbjct: 1086 RLWDVARRRQLGVFHGHKDFVNDVAFSPDGRTLATAGDDLTVRLWNVASHRERATLTGHS 1145

Query: 171  GDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            G               S     S+ + D                +    FSP+ + +   
Sbjct: 1146 GAVRGVAFSPDGRTLASSGNDGSVRLWDVRHRRFETALTGHSGAVRGVDFSPDGRTLV-- 1203

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                 +   V L D    R    +    + +    F+ +G+    S   D  + ++ +D
Sbjct: 1204 --SSGNDRTVRLWDVAGRRVWATLTGHTNAVWGVDFAPDGRTVA-SSSTDGTVRLWDLD 1259


>gi|221134035|ref|ZP_03560340.1| putative peptidase [Glaciecola sp. HTCC2999]
          Length = 683

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 99/278 (35%), Gaps = 22/278 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S ++++   + +L  +  DG+       S +   +    S +  K+AY +       ++Y
Sbjct: 56  SMNIMADNKRINLWTVQLDGS-AHLPFISDEYNHYSAVLSNSASKIAYISTRSG-TPQIY 113

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQSNATERLTN 299
           + D   +   K + N +S      FS + K    ++         +S+  +        +
Sbjct: 114 VHDFASNTTIK-VTNVQSSPSNISFSPDDKHIAFTMFTPTNAKPKFSLGFKPKGATWAED 172

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             +I+ +  +  D S +       G   LYV+ + G   ++++Q +       +W+  G 
Sbjct: 173 AHYID-NTLFQRDGSGM----KAPGNTHLYVVPTIGGTPRQVTQGQYDFASKVIWAADGK 227

Query: 360 LIAFTK--FSGEKFAIG------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            +  +       +F I       V   DG+   L            SP G+ L F+   D
Sbjct: 228 SVLMSANIRDDREFDIFNTDILKVDLSDGTYTALTNNTGPENIAALSPDGQYLAFTGFDD 287

Query: 412 GDTGS---KLYSIDL--NGRNETLINTPAYASDPQWVG 444
               +   +L+ ++L  NG             D QW  
Sbjct: 288 NGKSNQLEQLFIMNLTDNGTRALTPTLDRAVDDVQWAA 325



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 91/272 (33%), Gaps = 60/272 (22%)

Query: 155 AHT--ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           AH   ISD+ Y   +    +  S+I ++S    +      + V D   +N      +   
Sbjct: 77  AHLPFISDE-YNHYSAVLSNSASKIAYISTRSGTP----QIYVHDF-ASNTTIKVTNVQS 130

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMD----------------------------- 243
                 FSP+ + +A+  +   +    + +                              
Sbjct: 131 SPSNISFSPDDKHIAFTMFTPTNAKPKFSLGFKPKGATWAEDAHYIDNTLFQRDGSGMKA 190

Query: 244 ---------TRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQ-KDE------AMDIYS 286
                      I   P+++   +    +   ++++GK  L+S   +D+        DI  
Sbjct: 191 PGNTHLYVVPTIGGTPRQVTQGQYDFASKVIWAADGKSVLMSANIRDDREFDIFNTDILK 250

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGK----EQLYVMQSNGSDQKRI 341
           VDL       LTN       A+ SPD   + F   D  GK    EQL++M    +  + +
Sbjct: 251 VDLSDGTYTALTNNTGPENIAALSPDGQYLAFTGFDDNGKSNQLEQLFIMNLTDNGTRAL 310

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +   + +  D  W+   + + +  +      +
Sbjct: 311 TPTLDRAVDDVQWAADSESL-YISYDDRGEKL 341


>gi|186682464|ref|YP_001865660.1| hypothetical protein Npun_R2098 [Nostoc punctiforme PCC 73102]
 gi|186464916|gb|ACC80717.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1175

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 58/331 (17%), Positives = 116/331 (35%), Gaps = 49/331 (14%)

Query: 107 GAQVLVT---GRVIKEGKDRLRVEFRLWDVKDRKQII---GKKFFSSPASWRKIAHTISD 160
           G   +     G+++  G     V  RL+ V D KQ+    G   F  P ++    H ++ 
Sbjct: 560 GIHAVAFSPDGKLLATGDTNGEV--RLYQVADGKQLFICKGHTGFIWPVTFSPDGHLLA- 616

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
                                    SG    ++ + D                ++   FS
Sbjct: 617 -------------------------SGSDDQTVKLWDTSTGQCLATFQGHSAGIWSVSFS 651

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + Q +A ++ D      V L DT   +  + +    S + +  FS +G   L S   D 
Sbjct: 652 SDGQTLASSSEDT----TVKLWDTSTGQCIQTLQGHSSRVWSVAFSPDGT-ILASGNDDS 706

Query: 281 AMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++ ++  D+ ++   + L        S ++SPD  +++     +   +L+    N S+  
Sbjct: 707 SIRLW--DISTSQCIKTLVGHTHRVQSVAFSPDGDKLI-SGCHDRTVRLW--DINTSECL 761

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
              Q          +S  GD +A +    +   +  +      + L    S + +  +SP
Sbjct: 762 YTFQSHTDLVNSVAFSSDGDRLA-SGSDDQTVKLWDVNTGLCLKTLKGHGSRVWSVAFSP 820

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            G+ L        D   +L+ ++  G  +TL
Sbjct: 821 DGKMLASGSD---DQTVRLWDVNTGGCLKTL 848



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 115/339 (33%), Gaps = 54/339 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G ++  G D   +  RLWD+   + I  K         + +A               GD 
Sbjct: 696 GTILASGNDDSSI--RLWDISTSQCI--KTLVGHTHRVQSVA-----------FSPDGD- 739

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     ++SG    ++ + D + +   Y   S   ++    FS +  ++A  + D 
Sbjct: 740 ---------KLISGCHDRTVRLWDINTSECLYTFQSHTDLVNSVAFSSDGDRLASGSDDQ 790

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                V L D       K +    S + +  FS +GK    S   D+ + ++ V+     
Sbjct: 791 ----TVKLWDVNTGLCLKTLKGHGSRVWSVAFSPDGKMLA-SGSDDQTVRLWDVN-TGGC 844

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFD 351
            + L        S ++S +   +       G     + +  ++     +  +        
Sbjct: 845 LKTLQGYCNGIWSVTFSSNGQILA-----SGNNDQTVKLWDTSTGLCLKTLRGHSNRVTS 899

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              S  G+L+A      E   + +   +  Q  + L    + + +  +SP G+ L     
Sbjct: 900 VSLSQDGNLLA---SGSEDQTVKLWNANTGQCLKTLGGHSNRIISVAFSPDGKILATGSD 956

Query: 410 KDGDTGSKLYSID-------LNGRNETLINTPAYASDPQ 441
              D   KL+ ++       L G  + + +  A++ D Q
Sbjct: 957 ---DQSIKLWDVNTGKCLKTLQGHTQRIWSV-AFSPDGQ 991



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 103/334 (30%), Gaps = 50/334 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+++  G D   V  RLWDV     +   +                + I+       G  
Sbjct: 822  GKMLASGSDDQTV--RLWDVNTGGCLKTLQ-------------GYCNGIWSVTFSSNGQI 866

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                        SG    ++ + D                +     S +   +A  + D 
Sbjct: 867  L----------ASGNNDQTVKLWDTSTGLCLKTLRGHSNRVTSVSLSQDGNLLASGSEDQ 916

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L +    +  K +G   + I++  FS +GK  L +   D+++ ++ V+     
Sbjct: 917  ----TVKLWNANTGQCLKTLGGHSNRIISVAFSPDGK-ILATGSDDQSIKLWDVN-TGKC 970

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFD 351
             + L        S ++SPD   +       G   + + +         ++ +      + 
Sbjct: 971  LKTLQGHTQRIWSVAFSPDGQTLA-----SGCHDQTVRLWDVCIGSCIQVLEGHTDWIWS 1025

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRK 409
             V+SP G  +A +        + +      +    ++       +   S  G  L     
Sbjct: 1026 VVFSPDGMTLASSS---GDQTVKLWDISTGKCLRTLQGHTNCVYSSAISIDGCILA---S 1079

Query: 410  KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              GD   KL+ +  N   +TL     +     W 
Sbjct: 1080 GSGDQTIKLWDLSTNKEIKTLSGHNKWV----WS 1109



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 13/189 (6%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             I A  FS +GK    +   +  + +Y V                    ++SPD   + 
Sbjct: 559 GGIHAVAFSPDGKLLA-TGDTNGEVRLYQV-ADGKQLFICKGHTGFIWPVTFSPDGHLLA 616

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             SD    + + +  ++        Q   A  +   +S  G  +A +        + +  
Sbjct: 617 SGSD---DQTVKLWDTSTGQCLATFQGHSAGIWSVSFSSDGQTLASSSEDTT---VKLWD 670

Query: 378 KDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
               Q    ++   S + +  +SP G  L      + D+  +L+ I  +   +TL+    
Sbjct: 671 TSTGQCIQTLQGHSSRVWSVAFSPDGTILA---SGNDDSSIRLWDISTSQCIKTLVGHTH 727

Query: 436 YASDPQWVG 444
                 +  
Sbjct: 728 RVQSVAFSP 736


>gi|294139644|ref|YP_003555622.1| hypothetical protein SVI_0873 [Shewanella violacea DSS12]
 gi|293326113|dbj|BAJ00844.1| hypothetical protein [Shewanella violacea DSS12]
          Length = 394

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 95/275 (34%), Gaps = 47/275 (17%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +N      +       P+FSP+  K+A+  + D+  + +Y+MD   +   + +      I
Sbjct: 110 SNRITPLTNNMSQDVNPQFSPDGHKLAFIRFIDKKKV-LYIMDLESNTELEVLRAED--I 166

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFI--NIS---------- 306
               +++  +   I++++ +   + S+ L     + L  T       +IS          
Sbjct: 167 FGYSWANTQEVLAIAIKQGDHSQLLSLKLDGLTKKPLLQTRRSADKDDISSTVNNLSNLN 226

Query: 307 ----------ASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                       +S D SQI F    + R    QL +   +    K +S    +      
Sbjct: 227 SYRDQSEIMTPVWSTDDSQIAFIFHPTKRGEMRQLALYPIDTGVVKLVSPANISVQSPVQ 286

Query: 354 WSPQGDLIAFTKFSG---------------EKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           WS     + ++                       I + K  GS  +L   D   + P +S
Sbjct: 287 WSKDNHSLLYSGLQDYRYYYDEQTQRKTYLGSMQIFMSKLTGSTVQLTQGDHLHRNPVFS 346

Query: 399 PSGRSLIFSRKK--DGDTGSKLYSIDLNGRNETLI 431
           P GR++ +       G     L ++ L+G +   I
Sbjct: 347 PDGRNIAYLYADELGGARHLSLRTMALDGSHSKQI 381



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 95/262 (36%), Gaps = 43/262 (16%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-- 278
           P    + +       +  +Y ++ +  +  K   N     L P  S  G+   +S ++  
Sbjct: 31  PVSSAIYFNAKVGGPVTNIYAIE-QQGKLTKLTQNRVWRDLQPSVSKLGELVFMSNRQAE 89

Query: 279 --------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                    E  +IY +D +SN    LTN +  +++  +SPD  ++ F    + K+ LY+
Sbjct: 90  VKVDLNQTSEVFNIYHLDPKSNRITPLTNNMSQDVNPQFSPDGHKLAFIRFIDKKKVLYI 149

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--- 387
           M    + +  + + ++   F   W+   +++A     G+   +  +K DG  ++ L+   
Sbjct: 150 MDLESNTELEVLRAED--IFGYSWANTQEVLAIAIKQGDHSQLLSLKLDGLTKKPLLQTR 207

Query: 388 ----------------------EDSNLQAPTWSPSGRSLIFS---RKKDGDTGSKLYSID 422
                                 + S +  P WS     + F     K+       LY ID
Sbjct: 208 RSADKDDISSTVNNLSNLNSYRDQSEIMTPVWSTDDSQIAFIFHPTKRGEMRQLALYPID 267

Query: 423 LNGRNETLINTPAYASDP-QWV 443
             G  + +         P QW 
Sbjct: 268 -TGVVKLVSPANISVQSPVQWS 288



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 55/310 (17%), Positives = 112/310 (36%), Gaps = 57/310 (18%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD----------EDI 236
           G    ++  +++ G  +  LT +R     +P  S    ++ + +              ++
Sbjct: 43  GGPVTNIYAIEQQGK-LTKLTQNRVWRDLQPSVSKLG-ELVFMSNRQAEVKVDLNQTSEV 100

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             +Y +D + +R    + N  S  + P+FS +G +       D+   +Y +DL+SN    
Sbjct: 101 FNIYHLDPKSNRIT-PLTNNMSQDVNPQFSPDGHKLAFIRFIDKKKVLYIMDLESNTE-- 157

Query: 297 LTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD---- 351
           L      +I   S++     +     +    QL  ++ +G  +K + Q + ++  D    
Sbjct: 158 LEVLRAEDIFGYSWANTQEVLAIAIKQGDHSQLLSLKLDGLTKKPLLQTRRSADKDDISS 217

Query: 352 -------------------PVWSPQGDLIAFT---KFSGEKFAIGVMKKDGSQERLLV-E 388
                              PVWS     IAF       GE   + +   D    +L+   
Sbjct: 218 TVNNLSNLNSYRDQSEIMTPVWSTDDSQIAFIFHPTKRGEMRQLALYPIDTGVVKLVSPA 277

Query: 389 DSNLQAPT-WSPSGRSLIFS------------RKKDGDTGS-KLYSIDLNGRNETLINTP 434
           + ++Q+P  WS    SL++S             ++    GS +++   L G    L    
Sbjct: 278 NISVQSPVQWSKDNHSLLYSGLQDYRYYYDEQTQRKTYLGSMQIFMSKLTGSTVQLTQGD 337

Query: 435 AYASDPQWVG 444
               +P +  
Sbjct: 338 HLHRNPVFSP 347


>gi|126659698|ref|ZP_01730827.1| Peptidase C14, caspase catalytic subunit p20 [Cyanothece sp. CCY0110]
 gi|126619043|gb|EAZ89783.1| Peptidase C14, caspase catalytic subunit p20 [Cyanothece sp. CCY0110]
          Length = 1516

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 99/248 (39%), Gaps = 31/248 (12%)

Query: 185  VSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             +     ++ +   DGAN++        D+      FSP+ +   + +  D     V L 
Sbjct: 1028 GTTYTDGTIALWKADGANLKTFKAHEDTDKGARSISFSPDGE--TFVSSGDR---SVQLW 1082

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            +       + +G     + +  FS NGK    S   D  + ++  +   N  + +     
Sbjct: 1083 NIN-GTLIRVLGKHNGSVPSVSFSPNGKIIA-SASGDGTIKLW--NPNGNLLKTIKQAHS 1138

Query: 303  INI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              + S  +SPD + +   S  +G  + +   ++G+  K I+       +D  +S  G +I
Sbjct: 1139 PYVHSVEFSPDGTVLA-SSGSDGMVKFWT--ADGNFIKEINHGSH--VYDVSFSRDGQMI 1193

Query: 362  AFTKFSGEKFAIGVMKKDGS------QERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDT 414
            A    +GE   + + K+DG+        + L    N +   ++SP  R +  + +   D 
Sbjct: 1194 A---SAGEDRNVKIWKRDGTPIMTFQAAQNLTSHGNAVYEVSFSPD-RKIASASQ---DH 1246

Query: 415  GSKLYSID 422
              +++++D
Sbjct: 1247 TVRIWTLD 1254



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 89/241 (36%), Gaps = 18/241 (7%)

Query: 173  FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            F+     ++ S   G++K        DG  I+ +            FS + Q +A A  D
Sbjct: 1146 FSPDGTVLASSGSDGMVK----FWTADGNFIKEINHGSHVYDV--SFSRDGQMIASAGED 1199

Query: 233  DE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                I +         +A + + +  + +    FS + ++   S  +D  + I+++D   
Sbjct: 1200 RNVKIWKRDGTPIMTFQAAQNLTSHGNAVYEVSFSPD-RKIA-SASQDHTVRIWTLD--G 1255

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               + L    F   S ++S D   +     R+G  +L+    N   Q R+    + +   
Sbjct: 1256 ILLQTLKADSFYVESVTFSKDGEYLA-SGGRDGTVKLW--SDNQQVQPRLMNSDKKTL-- 1310

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +S    LIA+         +         + +   D +++   +SP+ + +  + + D
Sbjct: 1311 -SFSQDSQLIAYGTIDNTVEILKTKDLK-PFKTIDNYDESIEEVVFSPNSKIIGIANQID 1368

Query: 412  G 412
            G
Sbjct: 1369 G 1369



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 84/227 (37%), Gaps = 20/227 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ + + +G  ++ +  +    +    FSP+   +A  +   + +++ +  D  
Sbjct: 1113 SASGDGTIKLWNPNGNLLKTIKQAHSPYVHSVEFSPDGTVLA--SSGSDGMVKFWTADGN 1170

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD----LQSNATERLTNTL 301
              +      N  S +    FS +G+    S  +D  + I+  D    +   A + LT+  
Sbjct: 1171 FIKEI----NHGSHVYDVSFSRDGQMIA-SAGEDRNVKIWKRDGTPIMTFQAAQNLTSHG 1225

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  S+SPD  +I   S       + +   +G   + +  D         +S  G+ +
Sbjct: 1226 NAVYEVSFSPD-RKIASASQ---DHTVRIWTLDGILLQTLKADSFY-VESVTFSKDGEYL 1280

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            A +        +     D  Q +  + +S+ +  ++S   + + +  
Sbjct: 1281 A-SGGRDGTVKLW---SDNQQVQPRLMNSDKKTLSFSQDSQLIAYGT 1323



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 88/285 (30%), Gaps = 28/285 (9%)

Query: 130  LWDVK---DRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
            ++DV    D + I       +   W R     ++    Q++T                + 
Sbjct: 1181 VYDVSFSRDGQMIASAGEDRNVKIWKRDGTPIMTFQAAQNLTSHGNAVYEVSFSPDRKIA 1240

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S    +++ +   DG  ++ L      +     FS + + +A           V L    
Sbjct: 1241 SASQDHTVRIWTLDGILLQTLKADSFYVESV-TFSKDGEYLA----SGGRDGTVKLWSDN 1295

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                P+ + + +  +    FS + +        +    + + DL     + + N      
Sbjct: 1296 QQVQPRLMNSDKKTL---SFSQDSQLIAYGTIDNTVEILKTKDL--KPFKTIDNYDESIE 1350

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               +SP+S  I   +  +G  QL  +                      + P+  ++A  +
Sbjct: 1351 EVVFSPNSKIIGIANQIDGIVQLGNLD---DTPPVFLPTDSTFLNSINFDPKSQVVATGR 1407

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-----WSPSGRSLI 405
                K  +     DG+  +      N ++P      +SP  R + 
Sbjct: 1408 TLDGKVELW--SVDGNFIQ----SFNTESPAVSDLQFSPDSRLIA 1446



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 44/113 (38%), Gaps = 8/113 (7%)

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY----DDED 235
            V  +  +   K  L  +D    N      +    + + +FSP+ + +A  T+    +   
Sbjct: 1402 VVATGRTLDGKVELWSVD---GNFIQSFNTESPAVSDLQFSPDSRLIAIGTWAPFLNAHG 1458

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + +   +       K +   R+ +    FSS+G+    S  +D  + ++S +
Sbjct: 1459 TVILGKFNGEKIEHYKTLKGHRNWVTEVSFSSDGEIIA-SASQDSTIMLWSKN 1510


>gi|281410795|gb|ADA68810.1| HET-R [Podospora anserina]
          Length = 462

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 96/310 (30%), Gaps = 33/310 (10%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGK--------KFFSSPASWRKIAHTISDDI------ 162
            +     +    ++WD    + +               SP   R  +  + D +      
Sbjct: 144 QRLASGAVDRTVKIWDPASGQCLQTLEGHTGSVSSVAFSPDGQRFASGVVDDTVKIWDPA 203

Query: 163 ----YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                Q++ G +G  +S       +   SG    ++ + D                ++  
Sbjct: 204 SGQCLQTLEGHRGSVSSVAFSPDGQRFASGAGDRTIKIWDPASGQCLQTLEGHRGWVYSV 263

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + Q+ A    DD     V + D    +  + + +    + +  FS +G+R   S  
Sbjct: 264 AFSADGQRFASGAGDD----TVKIWDPASGQCLQTLESHNGSVSSVAFSPDGQRLA-SGA 318

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + I+         + L     +  S ++S D  ++       G + + +       
Sbjct: 319 DDDTVKIWD-PASGQCLQTLEGHKGLVYSVTFSADGQRLA---SGAGDDTVKIWDPASGQ 374

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAP 395
             +  +    S     +SP G   A          + +      Q    +E    ++ + 
Sbjct: 375 CLQTLEGHRGSVHSVAFSPDGQRFASGAVDDT---VKIWDPASGQCLQTLEGHNGSVSSV 431

Query: 396 TWSPSGRSLI 405
            +S  G+ L 
Sbjct: 432 AFSADGQRLA 441



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 80/242 (33%), Gaps = 19/242 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG    ++ + D             +  +    FS + Q++A    D      V +
Sbjct: 18  QRLASGAGDRTVKIWDPASGQCFQTLEGHNGSVSSVAFSADGQRLASGAVDR----TVKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +  + +      + +  FS++G+R   S   D+ + I+         + L    
Sbjct: 74  WDPASGQCLQTLEGHNGSVYSVAFSADGQRLA-SGAGDDTVKIWD-PASGQCLQTLEGHR 131

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               S ++S D  ++   + DR     + +         +  +    S     +SP G  
Sbjct: 132 GSVSSVAFSADGQRLASGAVDRT----VKIWDPASGQCLQTLEGHTGSVSSVAFSPDGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            A +    +   I        Q    +E    ++ +  +SP G+         GD   K+
Sbjct: 188 FA-SGVVDDTVKIW--DPASGQCLQTLEGHRGSVSSVAFSPDGQRFA---SGAGDRTIKI 241

Query: 419 YS 420
           + 
Sbjct: 242 WD 243



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 89/267 (33%), Gaps = 21/267 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG +  ++ + D             +  ++   FS + Q++A    DD     V +
Sbjct: 60  QRLASGAVDRTVKIWDPASGQCLQTLEGHNGSVYSVAFSADGQRLASGAGDD----TVKI 115

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +  + +   R  + +  FS++G+R   S   D  + I+         + L    
Sbjct: 116 WDPASGQCLQTLEGHRGSVSSVAFSADGQRLA-SGAVDRTVKIWD-PASGQCLQTLEGHT 173

Query: 302 FINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               S ++SPD  +        G   + + +         +  +    S     +SP G 
Sbjct: 174 GSVSSVAFSPDGQRFA-----SGVVDDTVKIWDPASGQCLQTLEGHRGSVSSVAFSPDGQ 228

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              F   +G++  I +      Q    +E     + +  +S  G+         GD   K
Sbjct: 229 R--FASGAGDR-TIKIWDPASGQCLQTLEGHRGWVYSVAFSADGQRFA---SGAGDDTVK 282

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           ++        +TL +     S   +  
Sbjct: 283 IWDPASGQCLQTLESHNGSVSSVAFSP 309



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 65/201 (32%), Gaps = 14/201 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  ++   FS + Q++A    D      V + D    +  + +      + +  FS
Sbjct: 1   LEGHNGSVYSVAFSADGQRLASGAGDR----TVKIWDPASGQCFQTLEGHNGSVSSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           ++G+R   S   D  + I+         + L        S ++S D  ++       G +
Sbjct: 57  ADGQRLA-SGAVDRTVKIWD-PASGQCLQTLEGHNGSVYSVAFSADGQRLA---SGAGDD 111

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +         +  +    S     +S  G  +A +        I        Q    
Sbjct: 112 TVKIWDPASGQCLQTLEGHRGSVSSVAFSADGQRLA-SGAVDRTVKIW--DPASGQCLQT 168

Query: 387 VE--DSNLQAPTWSPSGRSLI 405
           +E    ++ +  +SP G+   
Sbjct: 169 LEGHTGSVSSVAFSPDGQRFA 189


>gi|283856314|ref|YP_162436.2| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Zymomonas mobilis subsp. mobilis ZM4]
 gi|283775310|gb|AAV89327.2| peptidase S9 prolyl oligopeptidase active site domain protein
           [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 740

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 85/250 (34%), Gaps = 30/250 (12%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           + P FSP+ Q + Y + +      ++L        P+++   R  I    +S NG+    
Sbjct: 189 YNPIFSPDGQSLVYISKN-----SLWLYKRDSQTPPQKLFTIRGHIRDLSWSPNGQSLAF 243

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----------ESDRE 323
              + +   I    + S   E L      ++   +SPDS ++ F            SDRE
Sbjct: 244 VDDRIDHGFIALYRITSGQLEYLPAAFGNDLFPVFSPDSQKLAFIRAYEPPQSISSSDRE 303

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEA--------SYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            G   L +   N           +          + +  W+ Q + I F         I 
Sbjct: 304 KGWWSLIIADINDLTLTEKWHAPKGQGEAYAGTRHQNLYWTEQ-NQILFPWEQDGWLHIY 362

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNG-RNETLI 431
            +  D  +   L+     +   +        LI+S  +D      L++  L+  + E L 
Sbjct: 363 SLNPDNGKVSPLM-QGAFEVEQFIVDKAKNRLIYSANRDNRDHYSLWARSLSSEKTERLG 421

Query: 432 NTPAYASDPQ 441
           +  + A  P 
Sbjct: 422 SQESLAFQPA 431



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 15/159 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRV-------YLMDTRIDRAPKRIGNFRSMILA----PRFS 266
            FSP+  ++AY    D +                        + +    I+A    P FS
Sbjct: 135 TFSPDDSQLAYVRGGDPEFPDAPPPNPTFQPQAPEATIHLIDLTSASDNIIASGYNPIFS 194

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+  +   +   ++ +Y  D Q+   ++L          S+SP+   + F  DR    
Sbjct: 195 PDGQSLVYISKN--SLWLYKRDSQT-PPQKLFTIRGHIRDLSWSPNGQSLAFVDDRIDHG 251

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            + + +      + +      +   PV+SP    +AF +
Sbjct: 252 FIALYRITSGQLEYL-PAAFGNDLFPVFSPDSQKLAFIR 289



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 61/153 (39%), Gaps = 23/153 (15%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-----------ISQDKE---ASYFDPV 353
           ++SPD SQ+ +   R G  +           +            ++   +   AS ++P+
Sbjct: 135 TFSPDDSQLAYV--RGGDPEFPDAPPPNPTFQPQAPEATIHLIDLTSASDNIIASGYNPI 192

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +SP G  + +   +    ++ + K+D      +L     +++  +WSP+G+SL F   + 
Sbjct: 193 FSPDGQSLVYISKN----SLWLYKRDSQTPPQKLFTIRGHIRDLSWSPNGQSLAFVDDRI 248

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                 LY I  +G+ E L         P +  
Sbjct: 249 DHGFIALYRI-TSGQLEYLPAAFGNDLFPVFSP 280



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 51/156 (32%), Gaps = 32/156 (20%)

Query: 314 SQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKEASYFDPVWSPQGDLIAFTK 365
            +  F   + G+ QL + + +                +D   + ++  +SP    +A+ +
Sbjct: 88  KEWAFVRYQAGQHQLLLTRPDPQADSLPLDCILAHYKEDDGQALYNLTFSPDDSQLAYVR 147

Query: 366 FSGEKF-----------------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
               +F                  I ++    + + ++    N   P +SP G+SL++  
Sbjct: 148 GGDPEFPDAPPPNPTFQPQAPEATIHLIDLTSASDNIIASGYN---PIFSPDGQSLVYIS 204

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           K        LY  D     + L     +  D  W  
Sbjct: 205 KNS----LWLYKRDSQTPPQKLFTIRGHIRDLSWSP 236


>gi|147677100|ref|YP_001211315.1| signaling protein [Pelotomaculum thermopropionicum SI]
 gi|146273197|dbj|BAF58946.1| hypothetical signaling protein [Pelotomaculum thermopropionicum SI]
          Length = 636

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 52/331 (15%), Positives = 94/331 (28%), Gaps = 71/331 (21%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRD------GANIRYLTPSRDQILFEPRFSPNQ 223
            G  N  I     +  +   +  L  + +D      G        +       P +S + 
Sbjct: 226 PGSGNPAINLPDVNAAAFKGQGDLAFVRQDLLYTLDGKTGEVRQLTGSGRALHPAWSHDG 285

Query: 224 QKVAYATYDDEDILRVYLMDTRID------------------------------------ 247
           + +A+     +D     L   R D                                    
Sbjct: 286 RWLAFIRVTGQDAGNGQLWLARWDGSQVRQVQGLPGLAGRERFCWSPAANVLAVAMPDGV 345

Query: 248 ------RAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMD-----IYSVDLQSNATE 295
                   P+R+      +    +S +GK                   +Y+VD+      
Sbjct: 346 WLVPAEGEPRRLAGSEGTVSL-AWSPDGKALAFNVTLPSGEPQARSDALYTVDVDGGRPV 404

Query: 296 R-LTNTLFINISASYSPDSSQIVF-------ESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           R LT        A++ PD   +++        S       L+ ++   +  K ++    A
Sbjct: 405 RHLTAPQAGIQVAAWWPDGKGLLYWLDPLHSASLAADGMGLWSLRLGDTGPKLLTS-GLA 463

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERLL--VEDSNLQAPTWSPSGR 402
                  SPQG L+         +A   +  +       R L   E S    P++SP G 
Sbjct: 464 HRGWQSLSPQGSLLMVEGGGRIVWAGKSLATIDLASGSVRELKNPEGSVAIDPSFSPDGS 523

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            + F   K  D G  ++  D +G     + T
Sbjct: 524 RIAFVAAK--DLGGNVWGFDNDGELAAWVAT 552



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 98/285 (34%), Gaps = 49/285 (17%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
              + +V++  + + + ++  +G   R L  S   +     +SP+ + +A+         
Sbjct: 330 WSPAANVLAVAMPDGVWLVPAEGE-PRRLAGSEGTVSL--AWSPDGKALAFNVTLPSGEP 386

Query: 238 R-----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------KDEAMDIY 285
           +     +Y +D    R  + +   ++ I    +  +GK  L  +          + M ++
Sbjct: 387 QARSDALYTVDVDGGRPVRHLTAPQAGIQVAAWWPDGKGLLYWLDPLHSASLAADGMGLW 446

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY------VMQSNGSDQK 339
           S+ L     + LT+ L      S SP  S ++ E    G   ++       +       +
Sbjct: 447 SLRLGDTGPKLLTSGLAHRGWQSLSPQGSLLMVE---GGGRIVWAGKSLATIDLASGSVR 503

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------------------IGVMKKDGS 381
            +   + +   DP +SP G  IAF                           + +   DGS
Sbjct: 504 ELKNPEGSVAIDPSFSPDGSRIAFVAAKDLGGNVWGFDNDGELAAWVATRTLWIGNPDGS 563

Query: 382 QERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               L    + +  P WS  G  +++ R       + L+ I   G
Sbjct: 564 GAHPLRSAGAGVYQPAWSKDGEHILYVRD------NALWIIGAGG 602



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 86/252 (34%), Gaps = 27/252 (10%)

Query: 203 IRYLTPSRDQILFEPRFS-PNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMI 260
            +   P        P  + P+    A+    D   +R  L+ T   +  + R        
Sbjct: 217 AQEAEPGSSPGSGNPAINLPDVNAAAFKGQGDLAFVRQDLLYTLDGKTGEVRQLTGSGRA 276

Query: 261 LAPRFSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--YSPDSSQ 315
           L P +S +G+       + Q      ++      +   ++     +       +SP ++ 
Sbjct: 277 LHPAWSHDGRWLAFIRVTGQDAGNGQLWLARWDGSQVRQVQGLPGLAGRERFCWSPAANV 336

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------KFSGE 369
           +   +  +G   ++++ + G + +R++           WSP G  +AF       +    
Sbjct: 337 LA-VAMPDG---VWLVPAEG-EPRRLA--GSEGTVSLAWSPDGKALAFNVTLPSGEPQAR 389

Query: 370 KFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFS-----RKKDGDTGSKLYSID 422
             A+  +  DG +    L    + +Q   W P G+ L++             G  L+S+ 
Sbjct: 390 SDALYTVDVDGGRPVRHLTAPQAGIQVAAWWPDGKGLLYWLDPLHSASLAADGMGLWSLR 449

Query: 423 LNGRNETLINTP 434
           L      L+ + 
Sbjct: 450 LGDTGPKLLTSG 461



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 74/259 (28%), Gaps = 46/259 (17%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITG--EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
           +       R + H  +      +      G      L    S         L  +     
Sbjct: 394 YTVDVDGGRPVRHLTAPQAGIQVAAWWPDGKGLLYWLDPLHSASLAADGMGLWSLRLGDT 453

Query: 202 NIRYLTPS---RDQILFEPRFSP----NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
             + LT     R      P+ S        ++ +A         +  +D       +   
Sbjct: 454 GPKLLTSGLAHRGWQSLSPQGSLLMVEGGGRIVWA------GKSLATIDLASGSVRELKN 507

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              S+ + P FS +G R      KD   +++                       +  D  
Sbjct: 508 PEGSVAIDPSFSPDGSRIAFVAAKDLGGNVW----------------------GFDNDGE 545

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              + + R     L++   +GS    +     A  + P WS  G+ I + + +    A+ 
Sbjct: 546 LAAWVATRT----LWIGNPDGSGAHPLRSAG-AGVYQPAWSKDGEHILYVRDN----ALW 596

Query: 375 VMKKDGSQERLLVEDSNLQ 393
           ++   G Q   ++E  + +
Sbjct: 597 IIGAGGGQPEKILELFSEE 615



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 19/144 (13%)

Query: 311 PDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           PD +   F+   +     ++ LY +     + ++++         P WS  G  +AF + 
Sbjct: 236 PDVNAAAFKGQGDLAFVRQDLLYTLDGKTGEVRQLT--GSGRALHPAWSHDGRWLAFIRV 293

Query: 367 SG---EKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +G       + + + DGSQ R    L   +  +   WSP+   L  +          ++ 
Sbjct: 294 TGQDAGNGQLWLARWDGSQVRQVQGLPGLAGRERFCWSPAANVLAVA------MPDGVWL 347

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
           +   G    L  +    S   W  
Sbjct: 348 VPAEGEPRRLAGSEGTVSL-AWSP 370


>gi|186680883|ref|YP_001864079.1| hypothetical protein Npun_F0353 [Nostoc punctiforme PCC 73102]
 gi|186463335|gb|ACC79136.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1218

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 61/376 (16%), Positives = 126/376 (33%), Gaps = 50/376 (13%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLG-AQVLVTG------RVIKEGKDRLRVE------F 128
            +S  S  Q + +  +    + W   G    ++ G       +      +  V        
Sbjct: 732  LSFSSDGQTLASGSADFTIRLWKISGECDRILEGHSDRIWSISFSPDGQTLVSGSADFTI 791

Query: 129  RLWDVKDRK----------QIIGKKFFSSPASWRKIAHTISDDIYQSITGE--------- 169
            RLW+V              ++    F  +       +   +  I+++ TGE         
Sbjct: 792  RLWEVSTGNCFNILQEHSDRVRSLAFSPNAQMLVSASDDKTVRIWEASTGECLNILPGHT 851

Query: 170  KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
               F+        ++ SG    ++ + D +              +F   F+ + Q +A  
Sbjct: 852  NSIFSVAFNVDGRTIASGSTDQTVKLWDVNTGRCFKTLKGYSNSVFSVAFNLDGQTLASG 911

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            + D      V L D       K+       + +  F  +G     S   D  + ++SV  
Sbjct: 912  STDQ----TVRLWDVNTGTCLKKFAGHSGWVTSVAFHPDGDLLA-SSSADRTIRLWSVS- 965

Query: 290  QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                 + L + +    S ++SPD   +   SD    + + +   +      I Q   +  
Sbjct: 966  TGQCLQILKDHVNWVQSVAFSPDRQILASGSD---DQTIRLWSVSTGKCLNILQGHSSWI 1022

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLL-VEDSNLQAPTWSPSGRSLIFS 407
            +   +SP G+++A +        I +  +   +  ++L    S +QA  +SP G+ L   
Sbjct: 1023 WCVTFSPNGEIVASSSEDQT---IRLWSRSTGECLQILEGHTSRVQAIAFSPDGQIL--- 1076

Query: 408  RKKDGDTGSKLYSIDL 423
                 D   +L+S+D 
Sbjct: 1077 -SSAEDETVRLWSVDT 1091



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 76/207 (36%), Gaps = 16/207 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A  T D E  LR  L +    +           + +  FS +G+    S  
Sbjct: 607 AFSPDGTLLA--TGDAEGELR--LWEVATGKLVVNFAGHLGWVWSLAFSPDGQLLA-SCS 661

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + ++ V+        L+       S ++S D   +    D      + +   N  D
Sbjct: 662 SDKTIRLWDVN-TGKCLRTLSGHTSSIWSVAFSADGQMLASGGDE---PTIRLWNVNTGD 717

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPT 396
             +I            +S  G  +A        F I + K  G  +R+L   S+ + + +
Sbjct: 718 CHKIFSGHTDRILSLSFSSDGQTLASGSAD---FTIRLWKISGECDRILEGHSDRIWSIS 774

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +SP G++L+       D   +L+ +  
Sbjct: 775 FSPDGQTLV---SGSADFTIRLWEVST 798



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 85/242 (35%), Gaps = 22/242 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G  +  L + +     +          ++   FSP+ Q +A  + D      + L D  
Sbjct: 617 TGDAEGELRLWEVATGKLVVNFAGHLGWVWSLAFSPDGQLLASCSSDK----TIRLWDVN 672

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  + +    S I +  FS++G+         +   I   ++ +    ++ +     I
Sbjct: 673 TGKCLRTLSGHTSSIWSVAFSADGQMLA---SGGDEPTIRLWNVNTGDCHKIFSGHTDRI 729

Query: 306 -SASYSPDSSQIVFESDREGKEQLYV-MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            S S+S D   +       G     + +     +  RI +      +   +SP G  +  
Sbjct: 730 LSLSFSSDGQTLA-----SGSADFTIRLWKISGECDRILEGHSDRIWSISFSPDGQTLVS 784

Query: 364 TKFSGEKFAIGVMKKDGSQ-ERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                  F I + +        +L E S+ +++  +SP+ + L+ +     D   +++  
Sbjct: 785 GSAD---FTIRLWEVSTGNCFNILQEHSDRVRSLAFSPNAQMLVSASD---DKTVRIWEA 838

Query: 422 DL 423
             
Sbjct: 839 ST 840



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 97/308 (31%), Gaps = 40/308 (12%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                  E RLW+V   K ++               H     ++       G        
Sbjct: 616 ATGDAEGELRLWEVATGKLVVN-----------FAGHL--GWVWSLAFSPDG-------- 654

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
             + + S     ++ + D +              ++   FS + Q +A       D   +
Sbjct: 655 --QLLASCSSDKTIRLWDVNTGKCLRTLSGHTSSIWSVAFSADGQMLA----SGGDEPTI 708

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L +       K        IL+  FSS+G+    S   D  + ++ +   S   +R+  
Sbjct: 709 RLWNVNTGDCHKIFSGHTDRILSLSFSSDGQTLA-SGSADFTIRLWKI---SGECDRILE 764

Query: 300 TLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  S S+SPD   +V  S       + + + +  +   I Q+         +SP  
Sbjct: 765 GHSDRIWSISFSPDGQTLVSGS---ADFTIRLWEVSTGNCFNILQEHSDRVRSLAFSPNA 821

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            ++  +    +   I           L    +++ +  ++  GR++        D   KL
Sbjct: 822 QMLV-SASDDKTVRIWEASTGECLNILPGHTNSIFSVAFNVDGRTIASGST---DQTVKL 877

Query: 419 YSIDLNGR 426
           + ++  GR
Sbjct: 878 WDVN-TGR 884


>gi|113969487|ref|YP_733280.1| peptidase S41 [Shewanella sp. MR-4]
 gi|113884171|gb|ABI38223.1| peptidase S41 [Shewanella sp. MR-4]
          Length = 1093

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 112/307 (36%), Gaps = 36/307 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +Q    +   +  R+ F+S+S  +      L  M  DG++ + LT  +D  +   R   +
Sbjct: 215 HQGSVRQPMLWQDRLYFISDSDGNDN----LWSMALDGSDAKQLTQYKDWQVRGARM--D 268

Query: 223 QQKVAY----------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           Q KV +               + +L + L      R    + +      +   +  G + 
Sbjct: 269 QGKVVFQQGADIHVFDIAAAKDSLLDIELKSDFAQRREHWVKDPMDYATSANLALAGDKV 328

Query: 273 LISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           +I+ +      +    +  +   ++     +   +A  S D   +   SD  G+++++  
Sbjct: 329 VITAR----SHVAIAGIDGSRLVQVALPGTYRVRNAIMSQDGKSVYAISDMSGQQEIWQF 384

Query: 332 QSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            ++GS   K++++D          S  G  +A     G    + ++    +  + ++ + 
Sbjct: 385 PADGSSGAKQLTKDGHTLRMTLSLSNDGRYLAHDDNDG---NVWLLDLKKNSNQKIISNG 441

Query: 391 NLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASD 439
               P     WS   R +  ++ + G    ++    ++      +        +P ++ D
Sbjct: 442 EGLGPYADIRWSADSRFIALTKSEIGKQRPQIVLYSVDENKAQALTSDKYESYSPTFSRD 501

Query: 440 PQWVGFM 446
            QW+ F+
Sbjct: 502 GQWLYFL 508



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 61/159 (38%), Gaps = 10/159 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSN-ATERLT-NTLFINISASYSPDSSQIVFESDRE 323
           S +GK            +I+      +   ++LT +   + ++ S S D   +    D +
Sbjct: 363 SQDGKSVYAISDMSGQQEIWQFPADGSSGAKQLTKDGHTLRMTLSLSNDGRYLA-HDDND 421

Query: 324 GKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKD 379
           G   ++++    +  ++I  + E    Y D  WS     IA TK     ++  I +   D
Sbjct: 422 GN--VWLLDLKKNSNQKIISNGEGLGPYADIRWSADSRFIALTKSEIGKQRPQIVLYSVD 479

Query: 380 GSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            ++ + L  D     +PT+S  G+ L F   +       
Sbjct: 480 ENKAQALTSDKYESYSPTFSRDGQWLYFLSNRQFTATPS 518



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 62/163 (38%), Gaps = 13/163 (7%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKV 226
             +    S+      ++     +  +     DG+   + LT     +      S + + +
Sbjct: 356 RVRNAIMSQDGKSVYAISDMSGQQEIWQFPADGSSGAKQLTKDGHTLRMTLSLSNDGRYL 415

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDE-- 280
           A+   D      V+L+D + +   K I N     L P    R+S++ +   ++  +    
Sbjct: 416 AHDDNDG----NVWLLDLKKNSNQKIISNGEG--LGPYADIRWSADSRFIALTKSEIGKQ 469

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
              I    +  N  + LT+  + + S ++S D   + F S+R+
Sbjct: 470 RPQIVLYSVDENKAQALTSDKYESYSPTFSRDGQWLYFLSNRQ 512



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 80/221 (36%), Gaps = 28/221 (12%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L       A  +  + +    AP      +  + + + D    +++  L   A  RLT  
Sbjct: 14  LGTLSAAHAIAQPASNQGYYRAPALHD--QTLVFTAEGD----LWTQTLGQKAATRLTTL 67

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               + A+ S D   + + ++ EG  ++YV+   G   KR+S +  +      W+ +G+ 
Sbjct: 68  PAEELGAAISADGKWVAYVANYEGASEVYVIPVAGGVAKRVSFE-NSRVRVQGWTAKGE- 125

Query: 361 IAFTKFSG----EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK------- 409
           + ++  SG      + + ++  +      L     ++      + + + F+R        
Sbjct: 126 VLYSTDSGFGPANNWMLRLVNPETLATTDLPLADAVEGVV-DANNQYVYFTRFGLQVTGD 184

Query: 410 ----KDGDTGSKLYSIDLNGRNETLINTP---AYASDPQ-W 442
                 G    +L+   L G++E  + +         P  W
Sbjct: 185 NAKVYRGGAKGELWRFKLGGKDEAQLLSGQHQGSVRQPMLW 225



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 59/208 (28%), Gaps = 63/208 (30%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN- 299
              T   +A  R+    +  L    S++GK        + A ++Y + +     +R++  
Sbjct: 52  WTQTLGQKAATRLTTLPAEELGAAISADGKWVAYVANYEGASEVYVIPVAGGVAKRVSFE 111

Query: 300 -----------------------TLFIN---------------------ISASYSPDSSQ 315
                                      N                     +      ++  
Sbjct: 112 NSRVRVQGWTAKGEVLYSTDSGFGPANNWMLRLVNPETLATTDLPLADAVEGVVDANNQY 171

Query: 316 IVFES------------DREG-KEQLYVMQSNGSDQKRI-SQDKEASYFDPV-WSPQGDL 360
           + F               R G K +L+  +  G D+ ++ S   + S   P+ W    D 
Sbjct: 172 VYFTRFGLQVTGDNAKVYRGGAKGELWRFKLGGKDEAQLLSGQHQGSVRQPMLWQ---DR 228

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           + F   S     +  M  DGS  + L +
Sbjct: 229 LYFISDSDGNDNLWSMALDGSDAKQLTQ 256



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 275 SVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +     +++   L      +L                D  ++ F SD +G + L+ M 
Sbjct: 188 VYRGGAKGELWRFKLGGKDEAQLLSGQHQGSVRQPMLWQD--RLYFISDSDGNDNLWSMA 245

Query: 333 SNGSDQKRISQDKEA 347
            +GSD K+++Q K+ 
Sbjct: 246 LDGSDAKQLTQYKDW 260


>gi|322437539|ref|YP_004219629.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321165432|gb|ADW71135.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 246

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 59/175 (33%), Gaps = 12/175 (6%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-ISVQKDEAMDIYSVDLQSNATER 296
           +++           ++ +    +    +S +GK+   ++ + +     Y +D      E 
Sbjct: 9   KLWRARALDGSDKVQLTSDSLEVFLAHWSPDGKQLAIMAKEHNGVWQNYIIDAAGGKPEP 68

Query: 297 LTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQDKEASYF 350
           L +         +S D S+IVF  + +      G   + ++       +  +       F
Sbjct: 69  LLHEARNAADPGWSADGSKIVFGREPDLMGKETGSHTIQILDLATHQTE--TVPGSEGLF 126

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            P WSP G  IA      +  ++ +        R L   S    P WS   + + 
Sbjct: 127 SPRWSPDGRWIAALTLDQK--SLMLYDVAAHHWRQLGSTSAAD-PVWSRDSKFIY 178



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 58/162 (35%), Gaps = 13/162 (8%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           L  +   +LT+       A +SPD  Q+     +  G  Q Y++ + G   + +  +   
Sbjct: 16  LDGSDKVQLTSDSLEVFLAHWSPDGKQLAIMAKEHNGVWQNYIIDAAGGKPEPLLHEAR- 74

Query: 348 SYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           +  DP WS  G  I F +             I ++     Q   +     L +P WSP G
Sbjct: 75  NAADPGWSADGSKIVFGREPDLMGKETGSHTIQILDLATHQTETVPGSEGLFSPRWSPDG 134

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           R +             L   D+   +   + +   A+DP W 
Sbjct: 135 RWIAALTLDQ----KSLMLYDVAAHHWRQLGS-TSAADPVWS 171



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 81/202 (40%), Gaps = 14/202 (6%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG++ +    S    +F   +SP+ +++A    +   + + Y++D      P+ + +   
Sbjct: 17  DGSD-KVQLTSDSLEVFLAHWSPDGKQLAIMAKEHNGVWQNYIID-AAGGKPEPLLHEAR 74

Query: 259 MILAPRFSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
               P +S++G + +   + D       +  I  +DL ++ TE +  +  +  S  +SPD
Sbjct: 75  NAADPGWSADGSKIVFGREPDLMGKETGSHTIQILDLATHQTETVPGSEGL-FSPRWSPD 133

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              I   +    ++ L +        +++      S  DPVWS     I    F  +   
Sbjct: 134 GRWIA--ALTLDQKSLMLYDVAAHHWRQL---GSTSAADPVWSRDSKFIYIHAFQADMEP 188

Query: 373 IGVMKKDGSQERLLVEDSNLQA 394
           I  +       + + + S+ Q+
Sbjct: 189 ILKVNVLDGSMQPVADLSSFQS 210



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 13/126 (10%)

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGVMKKDGSQ-ERLLVEDS 390
            +GSD+ +++ D     F   WSP G  +A   K     +   ++   G + E LL E  
Sbjct: 16  LDGSDKVQLTSDSL-EVFLAHWSPDGKQLAIMAKEHNGVWQNYIIDAAGGKPEPLLHEAR 74

Query: 391 NLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLIN------TPAYASDP 440
           N   P WS  G  ++F R+ D          +  +DL       +       +P ++ D 
Sbjct: 75  NAADPGWSADGSKIVFGREPDLMGKETGSHTIQILDLATHQTETVPGSEGLFSPRWSPDG 134

Query: 441 QWVGFM 446
           +W+  +
Sbjct: 135 RWIAAL 140



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 54/125 (43%), Gaps = 6/125 (4%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S+I+F  E  + G    S  +   D A  +  T    + LF PR+SP+ + +A  T D +
Sbjct: 86  SKIVFGREPDLMGKETGSHTIQILDLATHQTETVPGSEGLFSPRWSPDGRWIAALTLDQK 145

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            ++   +         +++G+  +    P +S + K   I   + +   I  V++   + 
Sbjct: 146 SLMLYDV----AAHHWRQLGS--TSAADPVWSRDSKFIYIHAFQADMEPILKVNVLDGSM 199

Query: 295 ERLTN 299
           + + +
Sbjct: 200 QPVAD 204


>gi|158333393|ref|YP_001514565.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158303634|gb|ABW25251.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1200

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 95/255 (37%), Gaps = 21/255 (8%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            ++D        +   +   + F    + + SG   N + V D            +  ++
Sbjct: 613 QVADGQLHMSFEDHSYWGWALAFSPDGQQLASGGEDNMVRVWDVTTGQCINSLELKCNVV 672

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +   FSPN Q +A  T D      + L D   ++ P+ +    S + + +FS +G++ + 
Sbjct: 673 WTVAFSPNGQTLAIGTSDT----DILLWDLERNQLPEVLQGHTSDVRSLQFSPDGQQLV- 727

Query: 275 SVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVFES-DREGKEQLYVM 331
           S   D  + I+  +LQS   ++ T        +S +YS D   +   S DR     + + 
Sbjct: 728 SASHDHTLKIW--NLQSGKCQQ-TCVGHSEWVLSVAYSIDGQTLASGSADRT----VRLW 780

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDS 390
                  ++     +       +SP G  IA      E   + V    G   + LV    
Sbjct: 781 DVKTGQCRQTLSGHDLMVTAIAFSPDGQHIASAS---EDRTVRVWDVRGQHLKTLVGHLH 837

Query: 391 NLQAPTWSPSGRSLI 405
            + +  +SP G+ L 
Sbjct: 838 WVWSVAFSPDGQMLA 852



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 95/300 (31%), Gaps = 51/300 (17%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ SG    ++ + D      R      D ++    FSP+ Q +A A+ D      V +
Sbjct: 766  QTLASGSADRTVRLWDVKTGQCRQTLSGHDLMVTAIAFSPDGQHIASASEDR----TVRV 821

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D R       +G+    + +  FS +G+    S   D+ +  + V       + L   +
Sbjct: 822  WDVRGQHLKTLVGHLH-WVWSVAFSPDGQMLA-SGGSDQTVRFWHVQ-TGRPLKTLAGYI 878

Query: 302  FINISASYSPDSS----------------------------QIVFESDR-------EGKE 326
              + + ++ PD                               +   S R        G  
Sbjct: 879  DYSYALAWLPDGQALLSGSSNHTIRTWEQGRCRQTWKAHENWVWSVSCRPDGQVLASGSN 938

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             + +     +      Q+ E   F   WSP G   A          + + K D  +   L
Sbjct: 939  AVKLWDMETNACIATLQEDEGFVFCLAWSPNGRYFA---TGSSDHRVRIWKADTQRCLQL 995

Query: 387  VED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            +E     +    WSP+G+SL        D  + +++I   G      +   +     W  
Sbjct: 996  LEGHEGWVFQVAWSPNGQSLA---SCGVDGTANVWNIK-TGDCLQTFHEDNWIWSVVWSP 1051



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 69/431 (16%), Positives = 130/431 (30%), Gaps = 109/431 (25%)

Query: 50   IAFTKFVSIDELGGKVSEVVSKDLQR---------------SDVFNLISQDSFKQKITNP 94
            +AF+       +G   ++++  DL+R               S  F+        Q++ + 
Sbjct: 675  VAFSPNGQTLAIGTSDTDILLWDLERNQLPEVLQGHTSDVRSLQFSPD-----GQQLVSA 729

Query: 95   DSIPRFQDWN----------------SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
                  + WN                 L     + G+ +  G     V  RLWDVK  + 
Sbjct: 730  SHDHTLKIWNLQSGKCQQTCVGHSEWVLSVAYSIDGQTLASGSADRTV--RLWDVKTGQC 787

Query: 139  IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
                +   S       A   S D                    + + S     ++ V D 
Sbjct: 788  ----RQTLSGHDLMVTAIAFSPD-------------------GQHIASASEDRTVRVWDV 824

Query: 199  DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
             G +++ L       ++   FSP+ Q +A           V     +  R  K +  +  
Sbjct: 825  RGQHLKTLV-GHLHWVWSVAFSPDGQMLA----SGGSDQTVRFWHVQTGRPLKTLAGYID 879

Query: 259  MILAPRFSSNGKRALISVQKDEAM-----------------DIYSVD--------LQSNA 293
               A  +  +G +AL+S   +  +                  ++SV            + 
Sbjct: 880  YSYALAWLPDG-QALLSGSSNHTIRTWEQGRCRQTWKAHENWVWSVSCRPDGQVLASGSN 938

Query: 294  TERL----TN--------TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
              +L    TN                ++SP+       S      ++ + +++     ++
Sbjct: 939  AVKLWDMETNACIATLQEDEGFVFCLAWSPNGRYFATGSS---DHRVRIWKADTQRCLQL 995

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
             +  E   F   WSP G  +A     G      +  K G   +   ED+ + +  WSP  
Sbjct: 996  LEGHEGWVFQVAWSPNGQSLASCGVDGTANVWNI--KTGDCLQTFHEDNWIWSVVWSPDH 1053

Query: 402  RSLIFSRKKDG 412
            R L +S     
Sbjct: 1054 RFLAYSTADGN 1064



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 84/256 (32%), Gaps = 29/256 (11%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG   +++   ++     R    + +  ++     P+ Q +A  +   +      L D  
Sbjct: 895  SGSSNHTIRTWEQ--GRCRQTWKAHENWVWSVSCRPDGQVLASGSNAVK------LWDME 946

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +     +      +    +S NG+    +   D  + I+  D Q    + L        
Sbjct: 947  TNACIATLQEDEGFVFCLAWSPNGRYFA-TGSSDHRVRIWKADTQ-RCLQLLEGHEGWVF 1004

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              ++SP+   +      +G   ++       D  + +  ++   +  VWSP    +A++ 
Sbjct: 1005 QVAWSPNGQSLASC-GVDGTANVW--NIKTGDCLQ-TFHEDNWIWSVVWSPDHRFLAYST 1060

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI-- 421
              G    I        +    +     Q     +SPSGR L        D   K++ +  
Sbjct: 1061 ADG---NIKFWDTKTWKLLQTLTGHTAQVTRIDFSPSGRRLASGSY---DLTIKIWDVET 1114

Query: 422  -----DLNGRNETLIN 432
                  L G  + + N
Sbjct: 1115 GNCQQTLTGHTQIITN 1130



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 57/172 (33%), Gaps = 12/172 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G   + + +   D      L    +  +F+  +SPN Q +A    D        + + +
Sbjct: 975  TGSSDHRVRIWKADTQRCLQLLEGHEGWVFQVAWSPNGQSLASCGVDG----TANVWNIK 1030

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFIN 304
                 +   +  + I +  +S + +    S   D  +  +  D ++    + LT      
Sbjct: 1031 TGDCLQTF-HEDNWIWSVVWSPDHRFLAYST-ADGNIKFW--DTKTWKLLQTLTGHTAQV 1086

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                +SP   ++   S       + +      + ++          + V++P
Sbjct: 1087 TRIDFSPSGRRLASGSY---DLTIKIWDVETGNCQQTLTGHTQIITNLVFNP 1135



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/276 (14%), Positives = 83/276 (30%), Gaps = 56/276 (20%)

Query: 189 IKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              SL  ++  GAN  + L       +    +SP    +A  T D    +R++ +     
Sbjct: 562 RDMSLPQVNFKGANFQQTLFTQSLSGILNIAYSPKGDFLA--TIDATGSVRLWQVADGQL 619

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRAL-------------------------------ISV 276
                  ++    LA  FS +G++                                 ++ 
Sbjct: 620 HMSFEDHSYWGWALA--FSPDGQQLASGGEDNMVRVWDVTTGQCINSLELKCNVVWTVAF 677

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQ 327
             +           DI   DL+ N    +      ++ S  +SPD  Q+V  S       
Sbjct: 678 SPNGQTLAIGTSDTDILLWDLERNQLPEVLQGHTSDVRSLQFSPDGQQLVSASH---DHT 734

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           L +        ++             +S  G  +A          + +      Q R  +
Sbjct: 735 LKIWNLQSGKCQQTCVGHSEWVLSVAYSIDGQTLASGSADRT---VRLWDVKTGQCRQTL 791

Query: 388 EDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +L   A  +SP G+ +  + +   D   +++ +
Sbjct: 792 SGHDLMVTAIAFSPDGQHIASASE---DRTVRVWDV 824


>gi|190576367|ref|YP_001974212.1| putative dipeptidyl peptidase [Stenotrophomonas maltophilia K279a]
 gi|190014289|emb|CAQ47936.1| putative dipeptidyl peptidase [Stenotrophomonas maltophilia K279a]
          Length = 790

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 74/186 (39%), Gaps = 13/186 (6%)

Query: 264 RFSSNGKRALISVQKDEA--MDIYSVDLQSNATE---RLTNTLFINISAS---YSPDSSQ 315
           R+S +G++A + ++ ++     I SV+      +   RLT+  +IN   +   +  D   
Sbjct: 343 RWSPDGQQAAVMLRANDNKDRWIISVNAADGRVQNRHRLTDNAWINWGFNDFGWMADGRT 402

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAI 373
           +   S+  G   LY    +G+ + +     +     PV S  G    F   + +   + +
Sbjct: 403 LWLLSEESGFSHLYT--QSGTGKPQALTSGKWETSAPVLSADGKGFYFLCNQQAPHDYEV 460

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             +     Q R L   + ++  + SP G+ L+  R       ++L  +   G  +  + T
Sbjct: 461 CAVDTGSRQVRELTSLNGVEDFSLSPDGQQLL-VRYSGAYLPAQLAVVPSTGAGQARVLT 519

Query: 434 PAYASD 439
               ++
Sbjct: 520 DTRTAE 525



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 70/201 (34%), Gaps = 11/201 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPK-RIGNFRSM 259
            R L    D +    R+SP+ Q+ A      D++D   + +         + R+ +   +
Sbjct: 328 ERSLQVMSDFMGGGIRWSPDGQQAAVMLRANDNKDRWIISVNAADGRVQNRHRLTDNAWI 387

Query: 260 ILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                   + ++G+   +  ++     +Y+    +   + LT+  +   +   S D    
Sbjct: 388 NWGFNDFGWMADGRTLWLLSEESGFSHLYTQS-GTGKPQALTSGKWETSAPVLSADGKGF 446

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIG 374
            F  +++      V   +   ++           D   SP G  +   ++SG      + 
Sbjct: 447 YFLCNQQAPHDYEVCAVDTGSRQVRELTSLNGVEDFSLSPDGQQLL-VRYSGAYLPAQLA 505

Query: 375 VMKKDG-SQERLLVEDSNLQA 394
           V+   G  Q R+L +    + 
Sbjct: 506 VVPSTGAGQARVLTDTRTAEF 526



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 45/144 (31%), Gaps = 7/144 (4%)

Query: 308 SYSPDSSQIVF---ESDREGKEQLYVMQSNGS--DQKRISQDK--EASYFDPVWSPQGDL 360
            +SPD  Q       +D + +  + V  ++G   ++ R++ +      + D  W   G  
Sbjct: 343 RWSPDGQQAAVMLRANDNKDRWIISVNAADGRVQNRHRLTDNAWINWGFNDFGWMADGRT 402

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +           +      G  + L        AP  S  G+   F   +      ++ +
Sbjct: 403 LWLLSEESGFSHLYTQSGTGKPQALTSGKWETSAPVLSADGKGFYFLCNQQAPHDYEVCA 462

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
           +D   R    + +     D     
Sbjct: 463 VDTGSRQVRELTSLNGVEDFSLSP 486



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 68/190 (35%), Gaps = 11/190 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG--ANIRYLTPSR--DQILFEPRFSPNQ 223
           G +   + +   V         +  + V   DG   N   LT +   +    +  +  + 
Sbjct: 341 GIRWSPDGQQAAVMLRANDNKDRWIISVNAADGRVQNRHRLTDNAWINWGFNDFGWMADG 400

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEA 281
           + +   + +       +L        P+ + + +    AP  S++GK      + Q    
Sbjct: 401 RTLWLLSEESGFS---HLYTQSGTGKPQALTSGKWETSAPVLSADGKGFYFLCNQQAPHD 457

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKR 340
            ++ +VD  S     LT+   +    S SPD  Q++          QL V+ S G+ Q R
Sbjct: 458 YEVCAVDTGSRQVRELTSLNGVEDF-SLSPDGQQLLVRYSGAYLPAQLAVVPSTGAGQAR 516

Query: 341 ISQDKEASYF 350
           +  D   + F
Sbjct: 517 VLTDTRTAEF 526



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 34/100 (34%), Gaps = 11/100 (11%)

Query: 350 FDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGS--QERLLVE----DSNLQAPTWSPS 400
               WSP G   A    + +    + I V   DG       L +    +       W   
Sbjct: 340 GGIRWSPDGQQAAVMLRANDNKDRWIISVNAADGRVQNRHRLTDNAWINWGFNDFGWMAD 399

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           GR+L    ++ G   S LY+    G+ + L +     S P
Sbjct: 400 GRTLWLLSEESG--FSHLYTQSGTGKPQALTSGKWETSAP 437


>gi|145498947|ref|XP_001435460.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402592|emb|CAK68063.1| unnamed protein product [Paramecium tetraurelia]
          Length = 852

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 84/238 (35%), Gaps = 21/238 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             S+   +       +   S  Q+     FSP+   +A    D      + L D +  + 
Sbjct: 198 SRSIYFWNLKTRRKTFELKSDFQVYKTISFSPDGTILASCHLDM----SIRLWDVQTRQQ 253

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-- 307
             ++      I +  FS +G     S  +D ++  +  ++++   + L N   I+ S   
Sbjct: 254 KFQLIGHTWSICSVCFSPDGATLA-SGSRDTSIRFW--NVKTGQLKLLAN---IDDSPIN 307

Query: 308 --SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              +SPD + +   S    K+ +++       ++        S     +SP G ++A   
Sbjct: 308 HICFSPDGAVLACSSK---KKSIWLWDVKKQRKQYQLNGHTESVQSVCFSPDGKILASGS 364

Query: 366 FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  I +      ++  L      + +  +SP G SL+    K   +   ++  D
Sbjct: 365 QDNS---IFLWDIQTGKKSQLHGHTGTVHSLCFSPDGYSLVSCSDKQDQSIFGMFKQD 419



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 98/251 (39%), Gaps = 19/251 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            S+ SG   NS+ + +     I+ +   R Q+  +  FSPN   +A           +Y 
Sbjct: 149 NSLASGSDDNSIRLWNIKTGKIKLMLVDRSQV-QQICFSPNGSTLASC----GSSRSIYF 203

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
            + +  R    + +   +     FS +G   L S   D ++ ++  D+Q+   + +L   
Sbjct: 204 WNLKTRRKTFELKSDFQVYKTISFSPDGT-ILASCHLDMSIRLW--DVQTRQQKFQLIGH 260

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +   S  +SPD + +   S       +          K ++   ++      +SP G +
Sbjct: 261 TWSICSVCFSPDGATLASGSR---DTSIRFWNVKTGQLKLLANIDDSPINHICFSPDGAV 317

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +A +      + +  +KK   Q +L     ++Q+  +SP G+ L       G   + ++ 
Sbjct: 318 LACSSKKKSIW-LWDVKKQRKQYQLNGHTESVQSVCFSPDGKILA-----SGSQDNSIFL 371

Query: 421 IDL-NGRNETL 430
            D+  G+   L
Sbjct: 372 WDIQTGKKSQL 382



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 80/222 (36%), Gaps = 36/222 (16%)

Query: 106 LGAQVLVTGRVIKEGKD------RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS 159
           L +   V   +             L +  RLWDV+ R+Q            ++ I HT S
Sbjct: 215 LKSDFQVYKTISFSPDGTILASCHLDMSIRLWDVQTRQQ-----------KFQLIGHTWS 263

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
             I        G           ++ SG    S+   +     ++ L    D  +    F
Sbjct: 264 --ICSVCFSPDGA----------TLASGSRDTSIRFWNVKTGQLKLLANIDDSPINHICF 311

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   +A ++        ++L D +  R   ++      + +  FS +GK    S  +D
Sbjct: 312 SPDGAVLACSS----KKKSIWLWDVKKQRKQYQLNGHTESVQSVCFSPDGKILA-SGSQD 366

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            ++ ++  D+Q+    +L        S  +SPD   +V  SD
Sbjct: 367 NSIFLW--DIQTGKKSQLHGHTGTVHSLCFSPDGYSLVSCSD 406



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 85/230 (36%), Gaps = 25/230 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +   +   +     S +   +A  + D      + L D +  +   ++      +L   
Sbjct: 542 SILDKKKYDVNSICCSSDSLTLASGSRDT----YICLWDAKSGQLKSQLDGHFGWVLCLC 597

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATE-RL-TNTLFINISASYSPDSSQIVFESDR 322
           FS +    L S   D A+ ++  D+++   + +L  +T  IN S  +SPD + +V     
Sbjct: 598 FSPD-CSILASGYDDNAIRLW--DIKTGQQKFQLNGHTWGIN-SLCFSPDGTTLV---SS 650

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--G 380
            G   +     N   Q     D         +SP G  +     SG   +I +       
Sbjct: 651 GGGNSILFWNVNTGRQNSYLHDHNKYTMSVQFSPDGTKLV----SGGNNSICLWDIQRCR 706

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKK------DGDTGSKLYSIDLN 424
              +LL    ++++  + P+ +++    +       D  TG +LY  +++
Sbjct: 707 QTFQLLGVTGSVKSIYFIPNCKTIATLSQDNQTCFWDSKTGKQLYISNID 756



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 77/223 (34%), Gaps = 20/223 (8%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S ++ SG     +C+ D     ++         +    FSP+   +A    D+     + 
Sbjct: 560 SLTLASGSRDTYICLWDAKSGQLKSQLDGHFGWVLCLCFSPDCSILASGYDDN----AIR 615

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L D +  +   ++      I +  FS +G   + S     ++  ++V+        L + 
Sbjct: 616 LWDIKTGQQKFQLNGHTWGINSLCFSPDGTTLV-SSGGGNSILFWNVN-TGRQNSYLHDH 673

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQS----NGSDQKRISQDKEASYFDP---- 352
               +S  +SPD +++V      G   + +              ++   ++ YF P    
Sbjct: 674 NKYTMSVQFSPDGTKLV----SGGNNSICLWDIQRCRQTFQLLGVTGSVKSIYFIPNCKT 729

Query: 353 --VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
               S       +   +G++  I  +       +LL ++ +  
Sbjct: 730 IATLSQDNQTCFWDSKTGKQLYISNIDNQDDFTKLLTKNQHFC 772


>gi|330995904|ref|ZP_08319799.1| WD40-like protein [Paraprevotella xylaniphila YIT 11841]
 gi|329574243|gb|EGG55818.1| WD40-like protein [Paraprevotella xylaniphila YIT 11841]
          Length = 543

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 55/275 (20%), Positives = 97/275 (35%), Gaps = 47/275 (17%)

Query: 194 CVMDRDGANIR--YLTPSRDQILFEPRFSPNQQKVAYA------TYDDEDILRVYLMDTR 245
            V+  DG  ++    T S       P + P ++ +AY+      T+   D+ +V + D R
Sbjct: 245 TVIAYDGTLVKANLKTDSLISGGVYPAWHPTEKLIAYSVNQTGQTFHTRDLQKVEVQDMR 304

Query: 246 ID---------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            D            +  G+   M + P +S +GK    +  +    D  + +L +    R
Sbjct: 305 SDLILYDVEKNEVIRIPGDANEMEVFPWWSPDGKYLYYASARFVRRDT-TENLDNETILR 363

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                +     S+ P        + R G  +L V  +    +         S   P  SP
Sbjct: 364 YKEIKYNLFRRSFDP-------ANHRVGPPEL-VFDAAARGK---------SATLPRISP 406

Query: 357 QGDLIAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIF 406
            G  + FT      F I        +M     Q R + E ++       +WS +GR ++F
Sbjct: 407 DGRYLMFTLGEFGVFHIWHKDADLYLMDLRTRQVRPMTEINSDDVESYHSWSSNGRWVVF 466

Query: 407 SRKK--DGDTGSKLYSIDLNGRNETLINTPAYASD 439
           S ++     T   +  ID +G+       P    D
Sbjct: 467 SSRRYDGNYTRPFIAYIDKDGKGRKPFELPQEVPD 501



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 68/188 (36%), Gaps = 38/188 (20%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---------------- 233
           ++ L + D +   +  +    +++   P +SP+ + + YA+                   
Sbjct: 304 RSDLILYDVEKNEVIRIPGDANEMEVFPWWSPDGKYLYYASARFVRRDTTENLDNETILR 363

Query: 234 EDILRVYLMDTRIDRAPKRIGNF---------RSMILAPRFSSNGKRALISVQKDE---- 280
              ++  L     D A  R+G                 PR S +G+  + ++ +      
Sbjct: 364 YKEIKYNLFRRSFDPANHRVGPPELVFDAAARGKSATLPRISPDGRYLMFTLGEFGVFHI 423

Query: 281 ---AMDIYSVDLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDR-EGK---EQLYVM 331
                D+Y +DL++     +T     ++    S+S +   +VF S R +G      +  +
Sbjct: 424 WHKDADLYLMDLRTRQVRPMTEINSDDVESYHSWSSNGRWVVFSSRRYDGNYTRPFIAYI 483

Query: 332 QSNGSDQK 339
             +G  +K
Sbjct: 484 DKDGKGRK 491


>gi|212547173|ref|XP_002153739.1| WD-repeat protein, putative [Penicillium marneffei ATCC 18224]
 gi|210064395|gb|EEA18492.1| WD-repeat protein, putative [Penicillium marneffei ATCC 18224]
          Length = 1597

 Score = 88.5 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 105/311 (33%), Gaps = 43/311 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+++  G +     F+LWD+      + + + +       +A   S D            
Sbjct: 1097 GKLVASGSN--DTTFKLWDLATGS--LQQTYVTHSKMILIVA--FSPD------------ 1138

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    + V SG     + + D    N+          +    FS + + +A  + D 
Sbjct: 1139 -------CKLVASGSDDKIIKLWDLGTGNLLRTLEGHSHWISAIAFSLDGKLMASGSGDK 1191

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L D       + + ++   + A  FS +GK  ++S  +D  + ++  D  ++ 
Sbjct: 1192 ----TVKLWDPATGSLQQTLESYSDSVNAVAFSPDGK-LVVSGLEDNTVKLW--DSATSI 1244

Query: 294  TERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             ++       +++A ++SPD   +   S       + +         +  +         
Sbjct: 1245 LQQSLEGHSDSVNAVAFSPDGKLVASGSF---DTAIKLWDPATGSLLQTLKGHSQMIDTL 1301

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKK 410
             +SP G  +  +        +          +  ++  +    A  +SP G+ +      
Sbjct: 1302 AFSPDGRFVVVSSSEDRIVKLW--DSATGNLQQSLKGHSHWVRAVVFSPDGKLVA---SG 1356

Query: 411  DGDTGSKLYSI 421
              DT  KL+++
Sbjct: 1357 SFDTTIKLWNL 1367



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 83/226 (36%), Gaps = 18/226 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG    ++ + + +  ++        Q +    FSP+ + +A  + D      V L D
Sbjct: 1016 VASGSDDRNVRLWNPETGSLLQTLKGHSQSVHAVMFSPDGKLIASGSGDK----TVKLWD 1071

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTL 301
                   +       ++ A  FS +GK    S   D    ++  DL + + ++  +T++ 
Sbjct: 1072 PATGSLQQTFKGHSELVNAVAFSLDGKLVA-SGSNDTTFKLW--DLATGSLQQTYVTHSK 1128

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             I I A +SPD   +   SD    + + +      +  R  +          +S  G L+
Sbjct: 1129 MILIVA-FSPDCKLVASGSD---DKIIKLWDLGTGNLLRTLEGHSHWISAIAFSLDGKLM 1184

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
            A          + +        +  +E  +    A  +SP G+ ++
Sbjct: 1185 A---SGSGDKTVKLWDPATGSLQQTLESYSDSVNAVAFSPDGKLVV 1227



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 80/242 (33%), Gaps = 25/242 (10%)

Query: 204  RYLTPSRDQILFEP--------RFSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRI 253
            R++      I   P         FSP    +   Y       I ++  +++      + I
Sbjct: 896  RFIRKHSSMIDCAPLQLYSSALIFSPTTSIIRNIYINKIPHWIQKLPEVESAWSALLQTI 955

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPD 312
                  + A  FS +GK    S   D+ + ++  +  + + ++       ++ A ++SPD
Sbjct: 956  EGHSKPVKAVAFSPDGKLVA-SGSDDKTVKLW--NPATGSLQQTIEAHSESVKAVAFSPD 1012

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               +   SD      + +         +  +    S    ++SP G LIA          
Sbjct: 1013 GKLVASGSD---DRNVRLWNPETGSLLQTLKGHSQSVHAVMFSPDGKLIA---SGSGDKT 1066

Query: 373  IGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            + +        +   +     + A  +S  G+ +        DT  KL+ +      +T 
Sbjct: 1067 VKLWDPATGSLQQTFKGHSELVNAVAFSLDGKLVA---SGSNDTTFKLWDLATGSLQQTY 1123

Query: 431  IN 432
            + 
Sbjct: 1124 VT 1125



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 105/315 (33%), Gaps = 50/315 (15%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     +LWD      +   K  S      ++  T++           G F      
Sbjct: 1269 ASGSFDTAIKLWDPATGSLLQTLKGHS------QMIDTLA-------FSPDGRFV----- 1310

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                VVS      + + D    N++         +    FSP+ + VA  ++D      +
Sbjct: 1311 ----VVSSSEDRIVKLWDSATGNLQQSLKGHSHWVRAVVFSPDGKLVASGSFDT----TI 1362

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             L +       + +     ++    FS NGK    S   D+ + ++  DL + + +++  
Sbjct: 1363 KLWNLATGSLLQTLKGHSLLVNTVAFSPNGKLIA-SGSSDKTVRLW--DLATGSLQQIFK 1419

Query: 300  TLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +   +++  ++S DS  +   S     + + +  S      +  +          +S   
Sbjct: 1420 SHSESVNIVAFSSDSKLVASGSV---DKTVKLWDSTTGSLLQTLEGHSDWVNAVTFSLDT 1476

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFS--------- 407
             L+A +  S +   +          +  ++  +      ++S  G+ L+F+         
Sbjct: 1477 RLVA-SGSSDKTAKLW--DPATGNLQQTLDGHSDSIYALSFSLDGK-LLFTDQGRFEVEP 1532

Query: 408  --RKKDGDTGSKLYS 420
               ++   T S LYS
Sbjct: 1533 LYNRRSSPTASGLYS 1547


>gi|284034240|ref|YP_003384171.1| WD40 domain-containing protein beta Propeller [Kribbella flavida
           DSM 17836]
 gi|283813533|gb|ADB35372.1| WD40 domain protein beta Propeller [Kribbella flavida DSM 17836]
          Length = 288

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 97/284 (34%), Gaps = 36/284 (12%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           + ++ + + G     + F + ++V G +K+       DG   + L  S       P +SP
Sbjct: 23  VAEAASPQPGGRLLYVEFATTTLVPGQLKS----AQPDGNGGQDLGKSL-PWYAGPDYSP 77

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  K  YA     + + + + D         +         PR+S +G+       +   
Sbjct: 78  DGTKFVYA-----EGMSLRIADADGGNDEWFVAGPSGPSF-PRWSPDGRWIA---TEAGG 128

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           +  +  D        L  T F NI+ +++P   +       +G+ ++Y +     +Q+ +
Sbjct: 129 IHAWRTDRS--EYSNL-ATAFENIAMAWAPGGKRFA-TVTNDGEVRIYRV----GNQEPV 180

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSP 399
            +   A      WSP G  +A          I ++       R +         +P WSP
Sbjct: 181 KRFAVAEPRQVDWSPDGKTLAVQAQGD----IVLITVSTGVIRRVTSTPEVYESSPVWSP 236

Query: 400 SGRSLIFSRKKDG--------DTGSKLYSIDLNGRNETLINTPA 435
            G  + +     G             ++ +   G ++   +   
Sbjct: 237 DGGWIAYGSGAAGYDEYGNPHTVAPVIHLMTRTGTDQHPTSIAG 280



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 74/231 (32%), Gaps = 27/231 (11%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
             ++ Y  +    ++   L   + D    + +G        P +S +G + + +    E 
Sbjct: 32  GGRLLYVEFATTTLVPGQLKSAQPDGNGGQDLGKSLPWYAGPDYSPDGTKFVYA----EG 87

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           M +   D      E             +SPD   I           ++  +++ S+   +
Sbjct: 88  MSLRIADADGGNDEWFVAGPSGPSFPRWSPDGRWIA-----TEAGGIHAWRTDRSEYSNL 142

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           +   E       W+P G   A     GE   + + +    +       +  +   WSP G
Sbjct: 143 ATAFENIAM--AWAPGGKRFATVTNDGE---VRIYRVGNQEPVKRFAVAEPRQVDWSPDG 197

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-------AYASDPQWVGF 445
           ++L             L ++   G    + +TP        ++ D  W+ +
Sbjct: 198 KTLA----VQAQGDIVLITVS-TGVIRRVTSTPEVYESSPVWSPDGGWIAY 243



 Score = 36.5 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 10/93 (10%)

Query: 356 PQGD--LIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG 412
           P G    + F   +     +   + DG+  + L +       P +SP G   +++     
Sbjct: 31  PGGRLLYVEFATTTLVPGQLKSAQPDGNGGQDLGKSLPWYAGPDYSPDGTKFVYAE---- 86

Query: 413 DTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
             G  L   D +G N E  +  P+  S P+W  
Sbjct: 87  --GMSLRIADADGGNDEWFVAGPSGPSFPRWSP 117


>gi|193213051|ref|YP_001999004.1| WD-40 repeat protein [Chlorobaculum parvum NCIB 8327]
 gi|193086528|gb|ACF11804.1| WD-40 repeat protein [Chlorobaculum parvum NCIB 8327]
          Length = 1264

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 98/258 (37%), Gaps = 29/258 (11%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S  VVSG    ++ + D    N           + +  FSP+ + V  ++YD      + 
Sbjct: 928  STRVVSGSGDKTVKIWDTYSGNCISTFFEHALTISDCSFSPDGKYVISSSYDK----TIK 983

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTN 299
            + + +       +    S +   +FS +G+R  IS   D+ + I+  D +S      L+ 
Sbjct: 984  IWNVQSGHCISTLCGHLSEVNNAKFSPDGERI-ISASSDKMLKIW--DARSGQCLLTLSG 1040

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                  S ++SPD ++I+  S       L + ++   +  +       + +   +SP G 
Sbjct: 1041 HTEAVWSCAFSPDGTRIISASS---DHTLKIWEAQSGNCIQTLSGHTGAVWSCAFSPNGT 1097

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLV------EDSNLQAPTWSPSGRSLIFSRKKDG- 412
             I    +      +     D   +++L+         +  +  +SP G  +I S  ++G 
Sbjct: 1098 RIISASYDNT-LKLW----DAFSQQILISLPEYRSWFDSNSCAFSPDGTKII-STSRNGI 1151

Query: 413  -----DTGSKLYSIDLNG 425
                  +G  + +I   G
Sbjct: 1152 KLWESSSGQCIMNISKTG 1169



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 96/282 (34%), Gaps = 34/282 (12%)

Query: 135  DRKQIIGKKFFSSPASWR-KIAHTIS------DDIYQSITGEKGDFNSRILFVSESVVSG 187
            D K +I   +  +   W  +  H IS       ++  +     G          E ++S 
Sbjct: 969  DGKYVISSSYDKTIKIWNVQSGHCISTLCGHLSEVNNAKFSPDG----------ERIISA 1018

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                 L + D              + ++   FSP+  ++  A+ D      + + + +  
Sbjct: 1019 SSDKMLKIWDARSGQCLLTLSGHTEAVWSCAFSPDGTRIISASSDH----TLKIWEAQSG 1074

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINIS 306
               + +      + +  FS NG R  IS   D  + ++  D  S      L        S
Sbjct: 1075 NCIQTLSGHTGAVWSCAFSPNGTRI-ISASYDNTLKLW--DAFSQQILISLPEYRSWFDS 1131

Query: 307  AS--YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S  +SPD ++I+  S    +  + + +S+                   ++P G+   F 
Sbjct: 1132 NSCAFSPDGTKIISTS----RNGIKLWESSSGQCIMNISKTGGLISACAFNPSGNR--FI 1185

Query: 365  KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
              S + F      + G   ++L E  + +    +SP G  +I
Sbjct: 1186 SGSHDHFIKLWETESGRCVKILAEYSNAVLMCAFSPDGSRII 1227



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 69/187 (36%), Gaps = 8/187 (4%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             ++S    ++L + +    N           ++   FSPN  ++  A+YD+   L     
Sbjct: 1056 RIISASSDHTLKIWEAQSGNCIQTLSGHTGAVWSCAFSPNGTRIISASYDNTLKLWDAFS 1115

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
               +   P+    F S   A  FS +G +  IS  ++  + ++           ++ T  
Sbjct: 1116 QQILISLPEYRSWFDSNSCA--FSPDGTKI-ISTSRNG-IKLWE-SSSGQCIMNISKTGG 1170

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +  + +++P  ++  F S       + + ++      +I  +   +     +SP G  I 
Sbjct: 1171 LISACAFNPSGNR--FISGSHDHF-IKLWETESGRCVKILAEYSNAVLMCAFSPDGSRII 1227

Query: 363  FTKFSGE 369
                S E
Sbjct: 1228 SVTDSSE 1234



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 55/162 (33%), Gaps = 13/162 (8%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS--GIIKNS 192
            +  +II   + ++   W       S  I  S+   +  F+S     S          +N 
Sbjct: 1095 NGTRIISASYDNTLKLW----DAFSQQILISLPEYRSWFDSNSCAFSPDGTKIISTSRNG 1150

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            + + +               ++    F+P+  +    ++D      + L +T   R  K 
Sbjct: 1151 IKLWESSSGQCIMNISKTGGLISACAFNPSGNRFISGSHDH----FIKLWETESGRCVKI 1206

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            +  + + +L   FS +G R +      ++ +I   D  S   
Sbjct: 1207 LAEYSNAVLMCAFSPDGSRII---SVTDSSEIKLFDSFSGQV 1245


>gi|300864476|ref|ZP_07109343.1| putative Histone acetyltransferase [Oscillatoria sp. PCC 6506]
 gi|300337535|emb|CBN54491.1| putative Histone acetyltransferase [Oscillatoria sp. PCC 6506]
          Length = 494

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 49/241 (20%), Positives = 85/241 (35%), Gaps = 30/241 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-- 260
           I  L     + ++   FSP+   +A A+ D      V L         + I ++++    
Sbjct: 211 IPLLLKGHQEWVYSVSFSPDGSTIASASKDK----TVKLWSLG----GEAIASWKAHNDE 262

Query: 261 -LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                FS +G+    +   D+ + ++  +        +        S  +SPD   I   
Sbjct: 263 VFDASFSPDGQTIA-TASADKTVKLW--NKNGKLLRTIAGHSGWVYSVCFSPDGQVIATA 319

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     ++   + +      R   +         +SP G  IA          I  +  D
Sbjct: 320 S----ADRTVKLWNKNGKLLRTIAEGGGEVNWVTFSPDGRTIALAS-DDNTVKIRTV--D 372

Query: 380 GSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           G   R L + SN +   ++SP+GR L  S     D   KL+S+D       L+ T A   
Sbjct: 373 GRLLRTLEDHSNKVSRVSFSPNGRVLASSS---FDNTVKLWSLDG-----RLLKTLAGHR 424

Query: 439 D 439
           D
Sbjct: 425 D 425



 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 103/303 (33%), Gaps = 30/303 (9%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS---DDIYQS 165
           + LV G V       +            +    K +       R+ A   S   D I   
Sbjct: 162 EHLVYG-VSFNPNGNIVAS-------ASRDKTVKLWNLKAEGRRQKAEEFSYLRDSIIPL 213

Query: 166 ITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +     ++   + F  +  ++ S     ++ +    G  I       D++ F+  FSP+ 
Sbjct: 214 LLKGHQEWVYSVSFSPDGSTIASASKDKTVKLWSLGGEAIASWKAHNDEV-FDASFSPDG 272

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           Q +A A+ D      V L + +  +  + I      + +  FS +G+    +   D  + 
Sbjct: 273 QTIATASADK----TVKLWN-KNGKLLRTIAGHSGWVYSVCFSPDGQVIA-TASADRTVK 326

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           ++  +        +          ++SPD   I   SD    +    +++      R  +
Sbjct: 327 LW--NKNGKLLRTIAEGGGEVNWVTFSPDGRTIALASD----DNTVKIRTVDGRLLRTLE 380

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGR 402
           D         +SP G ++A + F      + +   DG   + L    + +   +WS  G+
Sbjct: 381 DHSNKVSRVSFSPNGRVLASSSFDNT---VKLWSLDGRLLKTLAGHRDRVYGLSWSTDGK 437

Query: 403 SLI 405
            L 
Sbjct: 438 MLA 440



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/296 (19%), Positives = 112/296 (37%), Gaps = 37/296 (12%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E+G  +       +++ +    NS+ +   DG+ +         I++   FSP+ Q +A
Sbjct: 74  HERGIRSLNFSPNGQTLATASEDNSVKIWRLDGS-LLTTLKGHRAIIYGVSFSPDGQTIA 132

Query: 228 YATYDDE---DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            A+ D+        ++L+ T   + PK   +   ++    F+ NG   + S  +D+ + +
Sbjct: 133 TASADNTVKLWRPDIWLLKTLEVKFPK---DREHLVYGVSFNPNGN-IVASASRDKTVKL 188

Query: 285 YSVDLQSNATE--------------RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +++  +    +               L        S S+SPD S I   S    K++   
Sbjct: 189 WNLKAEGRRQKAEEFSYLRDSIIPLLLKGHQEWVYSVSFSPDGSTIASAS----KDKTVK 244

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-ED 389
           + S G +     +      FD  +SP G  IA          + +  K+G   R +    
Sbjct: 245 LWSLGGEAIASWKAHNDEVFDASFSPDGQTIATASADKT---VKLWNKNGKLLRTIAGHS 301

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
             + +  +SP G+ +  +     D   KL+  + NG+    I       +  WV F
Sbjct: 302 GWVYSVCFSPDGQVIATAS---ADRTVKLW--NKNGKLLRTIAEGGGEVN--WVTF 350



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 81/229 (35%), Gaps = 31/229 (13%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDD-----------EDILRVYLMDTRIDRAPKRIGNFR 257
            R+ +++   F+PN   VA A+ D                       R    P  +   +
Sbjct: 160 DREHLVYGVSFNPNGNIVASASRDKTVKLWNLKAEGRRQKAEEFSYLRDSIIPLLLKGHQ 219

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSS 314
             + +  FS +G     S  KD+ + ++S+         + +    N     AS+SPD  
Sbjct: 220 EWVYSVSFSPDGSTIA-SASKDKTVKLWSL---GGEA--IASWKAHNDEVFDASFSPDGQ 273

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            I   S     ++   + +      R         +   +SP G +IA          + 
Sbjct: 274 TIATAS----ADKTVKLWNKNGKLLRTIAGHSGWVYSVCFSPDGQVIATASADRT---VK 326

Query: 375 VMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +  K+G   R + E    +   T+SP GR++  +     D   K+ ++D
Sbjct: 327 LWNKNGKLLRTIAEGGGEVNWVTFSPDGRTIALASD---DNTVKIRTVD 372



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 81/215 (37%), Gaps = 25/215 (11%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH   D+++ +     G          +++ +     ++ + +++G  +R +       +
Sbjct: 258 AHN--DEVFDASFSPDG----------QTIATASADKTVKLWNKNGKLLRTI-AGHSGWV 304

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +   FSP+ Q +A A+ D     R   +  +  +  + I      +    FS +G+   +
Sbjct: 305 YSVCFSPDGQVIATASAD-----RTVKLWNKNGKLLRTIAEGGGEVNWVTFSPDGRTIAL 359

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +   D  + I +VD        L +        S+SP+   +   S       + +   +
Sbjct: 360 A-SDDNTVKIRTVD--GRLLRTLEDHSNKVSRVSFSPNGRVLASSSF---DNTVKLWSLD 413

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           G   K ++  ++  Y    WS  G ++A   + G 
Sbjct: 414 GRLLKTLAGHRDRVYGL-SWSTDGKMLASGSWDGT 447



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 89/223 (39%), Gaps = 34/223 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSPN   +A    D      V +            G+ R +  +  FS NG+    +  
Sbjct: 41  SFSPNSDIIATVGADK----LVKIWSINGTLLRTWEGHERGI-RSLNFSPNGQTLA-TAS 94

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE----GKEQLYVMQS 333
           +D ++ I+ +D   +    L     I    S+SPD   I   S        +  +++++ 
Sbjct: 95  EDNSVKIWRLD--GSLLTTLKGHRAIIYGVSFSPDGQTIATASADNTVKLWRPDIWLLK- 151

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--------- 384
             + + +  +D+E   +   ++P G+++A      +   +  +K +G +++         
Sbjct: 152 --TLEVKFPKDREHLVYGVSFNPNGNIVASASRD-KTVKLWNLKAEGRRQKAEEFSYLRD 208

Query: 385 ----LLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               LL++       + ++SP G ++  + K   D   KL+S+
Sbjct: 209 SIIPLLLKGHQEWVYSVSFSPDGSTIASASK---DKTVKLWSL 248


>gi|311030850|ref|ZP_07708940.1| WD-40-like beta propeller repeat-containing protein [Bacillus sp.
           m3-13]
          Length = 349

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 62/304 (20%), Positives = 120/304 (39%), Gaps = 42/304 (13%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT-PSRDQILFEPRFSPNQQKVAYATYD 232
           +  I+F       G     L   + DG+N+  LT P +++    PR+S N  K+ + + +
Sbjct: 52  DKSIVFPFYQSGDGA----LYKANVDGSNVNQLTYPRQEESHVHPRYSSNGDKILFLSQE 107

Query: 233 DED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------- 278
             +      +Y+M++       R+     +I    FS + +       K           
Sbjct: 108 KGENTLTRSLYIMNSD-GSELTRLSKENELITDAIFSQDDQTIFYLAAKHYQEGNEMEEG 166

Query: 279 DEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFE--SDREGK---EQLYVMQ 332
              +D+YS+ +  +  ERLT+   +   S S + D  ++ +   S  E K       VM 
Sbjct: 167 PTNIDLYSISITGDKKERLTHDESLKKRSLSLTEDGGKLGYVEWSKEEEKGLHSSFIVMD 226

Query: 333 SNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKDGSQER 384
           +   +++ ++ D   +  +    SP GDLIAF+  S          + +  M   G + +
Sbjct: 227 TQTMEKEYVNPDFNTNIIYSGKLSPTGDLIAFSAASENPREKSQFIYEMYTMSTSGKEVQ 286

Query: 385 LLVE-DSNLQAPTWSPSGRSLIFSRKKD---GDTGSKLYSIDLNGRNETLINTPAYASDP 440
            L    + +  P +      ++F + +    G    KL+++D+NG     I        P
Sbjct: 287 PLTSFRTLITEPVFFRDKERVLFIQDQSWLRGKPNYKLWAVDINGEKIQSITL----QMP 342

Query: 441 QWVG 444
           Q+ G
Sbjct: 343 QFSG 346


>gi|302327237|gb|ADL26438.1| conserved domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 418

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 53/317 (16%), Positives = 101/317 (31%), Gaps = 65/317 (20%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           KG     I++ +         + + +M+ DG N R LT S + + + PR +P+  KV + 
Sbjct: 60  KGKIEGAIVWATSRA---NPHHDIWIMNADGTNARALTKSNN-VDWFPRIAPDGSKVLFN 115

Query: 230 TY----------DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                       +  +   ++ +        K + N         +  +GK  + S    
Sbjct: 116 RSKGGWVPENDANYPEKWDLWTVGIDGTNETKIVEN----ATWGTWRPDGKSIVFS---- 167

Query: 280 EAMDIYSVDLQSNATERLTNTLF-------INISASYSPDSSQIVFE---SDREGK---- 325
            A  ++++DL S     + +          I    + SPD   +      S RE      
Sbjct: 168 RAGKVFTMDLASKKETLVLDGEKVFKKAGVILQEPNMSPDGKHLAITLRGSMRETGVWDL 227

Query: 326 -EQLYV---------MQSNGSDQKRISQDKEASYFDPV---W--SPQGDLIAFTKFSGEK 370
            + ++             +G+   R++         P    W  +  G  +    F G  
Sbjct: 228 TKNVWTKSGDGCQIDWNFDGTKLYRVNPTGNGGTAAPSEILWFTAKDGKQVEKVGFFGIP 287

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG------DTGSKLYSIDLN 424
             + +M   G +       S+   P  SP G+ L++     G      D    ++ I   
Sbjct: 288 KNVKLMDLPGRR-------SHEYFPRLSPDGKWLVWGATDKGHDHDLFDYELYIWKIGEP 340

Query: 425 GRNETLINTP-AYASDP 440
               T I         P
Sbjct: 341 VETATRITYNSGNDRWP 357



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 12/98 (12%)

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDG--- 412
           +G ++  T  +     I +M  DG+  R L + +N    P  +P G  ++F+R K G   
Sbjct: 64  EGAIVWATSRANPHHDIWIMNADGTNARALTKSNNVDWFPRIAPDGSKVLFNRSKGGWVP 123

Query: 413 ------DTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                      L+++ ++G NET I     A+   W  
Sbjct: 124 ENDANYPEKWDLWTVGIDGTNETKIVE--NATWGTWRP 159



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/248 (11%), Positives = 69/248 (27%), Gaps = 72/248 (29%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S+  +V E+  +   K  L  +  DG N   +  +         + P+ + + ++     
Sbjct: 117 SKGGWVPENDANYPEKWDLWTVGIDGTNETKIVEN----ATWGTWRPDGKSIVFSRAGKV 172

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKD-------------- 279
             + +      +    +++     +IL  P  S +GK   I+++                
Sbjct: 173 FTMDLASKKETLVLDGEKVFKKAGVILQEPNMSPDGKHLAITLRGSMRETGVWDLTKNVW 232

Query: 280 -------------EAMDIYSVDLQSNATE-----------------------------RL 297
                        +   +Y V+   N                                +L
Sbjct: 233 TKSGDGCQIDWNFDGTKLYRVNPTGNGGTAAPSEILWFTAKDGKQVEKVGFFGIPKNVKL 292

Query: 298 TNTLFI---NISASYSPDSSQIVFESDREGKEQ--------LYVMQSNGSDQKRISQDKE 346
            +             SPD   +V+ +  +G +         ++ +        RI+ +  
Sbjct: 293 MDLPGRRSHEYFPRLSPDGKWLVWGATDKGHDHDLFDYELYIWKIGEPVETATRITYNSG 352

Query: 347 ASYFDPVW 354
              +  +W
Sbjct: 353 NDRWPDIW 360



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 62/187 (33%), Gaps = 16/187 (8%)

Query: 132 DVKDRKQ---IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           D+  +K+   + G+K F       +  +   D  + +IT       + +  ++++V +  
Sbjct: 176 DLASKKETLVLDGEKVFKKAGVILQEPNMSPDGKHLAITLRGSMRETGVWDLTKNVWTKS 235

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                   + DG  +  + P+ +     P      + + +   D + + +V       + 
Sbjct: 236 GDGCQIDWNFDGTKLYRVNPTGNGGTAAPS-----EILWFTAKDGKQVEKVGFFGIPKNV 290

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNT 300
               +   RS    PR S +GK  +             D  + I+ +        R+T  
Sbjct: 291 KLMDLPGRRSHEYFPRLSPDGKWLVWGATDKGHDHDLFDYELYIWKIGEPVETATRITYN 350

Query: 301 LFINISA 307
              +   
Sbjct: 351 SGNDRWP 357


>gi|281410797|gb|ADA68811.1| HET-R [Podospora anserina]
          Length = 462

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 100/313 (31%), Gaps = 35/313 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQII------GKKFFS--SPASWRKIAHTISDDI--- 162
           G+ +  G     V  ++WD    +         G  +    SP   R  +  + D +   
Sbjct: 17  GQRLASGAGDRTV--KIWDPASGQCFQTLEGHNGSVYSVAFSPDGQRFASGVVDDTVKIW 74

Query: 163 -------YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                   Q++ G +G  +S       +   SG    ++ + D                +
Sbjct: 75  DPASGQCLQTLEGHRGSVSSVAFSPDGQRFASGAGDRTIKIWDPASGQCLQTLEGHRGWV 134

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +   FS + Q+ A    DD     V + D    +  + + +    + +  FS +G+R   
Sbjct: 135 YSVAFSADGQRFASGAGDD----TVKIWDPASGQCLQTLESHNGSVSSVAFSPDGQRLA- 189

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S   D+ + I+         + L     +  S ++S D  ++       G + + +    
Sbjct: 190 SGADDDTVKIWD-PASGQCLQTLEGHKGLVYSVTFSADGQRLA---SGAGDDTVKIWDPA 245

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNL 392
                +  +    S     +SP G   A          + +      Q    +E    ++
Sbjct: 246 SGQCLQTLEGHRGSVHSVAFSPDGQRFASGAVDDT---VKIWDPASGQCLQTLEGHNGSV 302

Query: 393 QAPTWSPSGRSLI 405
            +  +S  G+ L 
Sbjct: 303 SSVAFSADGQRLA 315



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 98/272 (36%), Gaps = 22/272 (8%)

Query: 141 GKKFFSSPASWR-KIAHTISDDIYQSITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMD 197
           G++F S       KI    S    Q++ G +G +   + F +  +   SG   +++ + D
Sbjct: 101 GQRFASGAGDRTIKIWDPASGQCLQTLEGHRG-WVYSVAFSADGQRFASGAGDDTVKIWD 159

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
                      S +  +    FSP+ Q++A    DD     V + D    +  + +   +
Sbjct: 160 PASGQCLQTLESHNGSVSSVAFSPDGQRLASGADDD----TVKIWDPASGQCLQTLEGHK 215

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            ++ +  FS++G+R   S   D+ + I+         + L        S ++SPD  +  
Sbjct: 216 GLVYSVTFSADGQRLA-SGAGDDTVKIWD-PASGQCLQTLEGHRGSVHSVAFSPDGQRFA 273

Query: 318 FESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                 G   + + +         +  +    S     +S  G  +A          + +
Sbjct: 274 -----SGAVDDTVKIWDPASGQCLQTLEGHNGSVSSVAFSADGQRLASGAVDCT---VKI 325

Query: 376 MKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLI 405
                 Q  + L   + ++ +  +SP G+ L 
Sbjct: 326 WDPASGQCLQTLESHNGSVSSVAFSPDGQRLA 357



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 65/201 (32%), Gaps = 14/201 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  ++   FS + Q++A    D      V + D    +  + +      + +  FS
Sbjct: 1   LEGHNGSVYSVAFSADGQRLASGAGDR----TVKIWDPASGQCFQTLEGHNGSVYSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+R   S   D+ + I+         + L        S ++SPD  +        G  
Sbjct: 57  PDGQRFA-SGVVDDTVKIWD-PASGQCLQTLEGHRGSVSSVAFSPDGQRFA---SGAGDR 111

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ER 384
            + +         +  +      +   +S  G   A          + +      Q  + 
Sbjct: 112 TIKIWDPASGQCLQTLEGHRGWVYSVAFSADGQRFA---SGAGDDTVKIWDPASGQCLQT 168

Query: 385 LLVEDSNLQAPTWSPSGRSLI 405
           L   + ++ +  +SP G+ L 
Sbjct: 169 LESHNGSVSSVAFSPDGQRLA 189



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 77/228 (33%), Gaps = 18/228 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG   +++ + D               +++   FS + Q++A    DD     V +
Sbjct: 186 QRLASGADDDTVKIWDPASGQCLQTLEGHKGLVYSVTFSADGQRLASGAGDD----TVKI 241

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +  + +   R  + +  FS +G+R   S   D+ + I+         + L    
Sbjct: 242 WDPASGQCLQTLEGHRGSVHSVAFSPDGQRFA-SGAVDDTVKIWD-PASGQCLQTLEGHN 299

Query: 302 FINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               S ++S D  ++       G     + +         +  +    S     +SP G 
Sbjct: 300 GSVSSVAFSADGQRLA-----SGAVDCTVKIWDPASGQCLQTLESHNGSVSSVAFSPDGQ 354

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
            +A +    +   I        Q    +E    ++ +  +SP G+   
Sbjct: 355 RLA-SGADDDTVKIW--DPASGQCLQTLEGHRGSVHSVAFSPDGQRFA 399



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 91/270 (33%), Gaps = 34/270 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQII------GKKFFSS-PASWRKIAHTISDDIY--- 163
           G+ +  G D   V  ++WD    + +       G  +  +  A  +++A    DD     
Sbjct: 185 GQRLASGADDDTV--KIWDPASGQCLQTLEGHKGLVYSVTFSADGQRLASGAGDDTVKIW 242

Query: 164 --------QSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                   Q++ G +G  +S       +   SG + +++ + D             +  +
Sbjct: 243 DPASGQCLQTLEGHRGSVHSVAFSPDGQRFASGAVDDTVKIWDPASGQCLQTLEGHNGSV 302

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               FS + Q++A    D      V + D    +  + + +    + +  FS +G+R   
Sbjct: 303 SSVAFSADGQRLASGAVD----CTVKIWDPASGQCLQTLESHNGSVSSVAFSPDGQRLA- 357

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--EQLYVMQ 332
           S   D+ + I+         + L        S ++SPD  +        G   + + +  
Sbjct: 358 SGADDDTVKIWD-PASGQCLQTLEGHRGSVHSVAFSPDGQRFA-----SGAVDDTVKIWD 411

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                  +  +    S     +S  G  +A
Sbjct: 412 PASGQCLQTLEGHNGSVSSVAFSADGQRLA 441



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 66/197 (33%), Gaps = 19/197 (9%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSP 311
           +      + +  FS++G+R   S   D  + I+  D  S    + L        S ++SP
Sbjct: 1   LEGHNGSVYSVAFSADGQRLA-SGAGDRTVKIW--DPASGQCFQTLEGHNGSVYSVAFSP 57

Query: 312 DSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           D  +        G   + + +         +  +    S     +SP G    F   +G+
Sbjct: 58  DGQRFA-----SGVVDDTVKIWDPASGQCLQTLEGHRGSVSSVAFSPDGQR--FASGAGD 110

Query: 370 KFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           +  I +      Q    +E     + +  +S  G+   F+    GD   K++        
Sbjct: 111 R-TIKIWDPASGQCLQTLEGHRGWVYSVAFSADGQR--FASG-AGDDTVKIWDPASGQCL 166

Query: 428 ETLINTPAYASDPQWVG 444
           +TL +     S   +  
Sbjct: 167 QTLESHNGSVSSVAFSP 183


>gi|17227525|ref|NP_484073.1| WD-40 repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17135007|dbj|BAB77553.1| WD-40 repeat protein [Nostoc sp. PCC 7120]
          Length = 1227

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 61/339 (17%), Positives = 118/339 (34%), Gaps = 51/339 (15%)

Query: 111 LVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           +V+ +   +G       +  E RLW   D KQ+                      IY+  
Sbjct: 605 VVSVKFSPDGKYFATGLMNGEIRLWQTSDNKQL---------------------RIYKGH 643

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T     F         +  S      L  +   G  ++ L+ + +++     FSP+ + +
Sbjct: 644 TAWVWAFAFSPDSRMLASGSADSTIKLWDVH-TGECLKTLSKNTNKVYSV-AFSPDGRIL 701

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS---NGKRALISVQKDEAMD 283
           A A+ D      + L D       + +      + +  FS    +    L S   D+ + 
Sbjct: 702 ASASQDQ----TIKLWDIATGNCQQTLIGHDDWVWSVTFSPVTDDRPLLLASSSADQHIK 757

Query: 284 IYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++  D+ +    + L        S S+SPD   +   S  +   +L+          +I 
Sbjct: 758 LW--DVATGKCLKTLKGHTREVHSVSFSPDGQTLA-SSGEDSTVRLW--DVKTGQCWQIF 812

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPS 400
           +      +   +SP G  +A     GE  +I +      +    L    S + A  +SP 
Sbjct: 813 EGHSKKVYSVRFSPDGQTLASC---GEDRSIKLWDIQRGECVNTLWGHSSQVWAIAFSPD 869

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           GR+LI       D  ++L+ + + G +  ++    Y  D
Sbjct: 870 GRTLISCSD---DQTARLWDV-ITGNSLNILR--GYTRD 902



 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 105/300 (35%), Gaps = 40/300 (13%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              +LWDV   K +   K            HT   +++       G          +++ S
Sbjct: 755  HIKLWDVATGKCLKTLK-----------GHTR--EVHSVSFSPDG----------QTLAS 791

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                +++ + D        +     + ++  RFSP+ Q +A    D      + L D + 
Sbjct: 792  SGEDSTVRLWDVKTGQCWQIFEGHSKKVYSVRFSPDGQTLASCGEDR----SIKLWDIQR 847

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI- 305
                  +    S + A  FS +G+   IS   D+   ++  D+ +  +  +      ++ 
Sbjct: 848  GECVNTLWGHSSQVWAIAFSPDGRTL-ISCSDDQTARLW--DVITGNSLNILRGYTRDVY 904

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S ++SPDS  +   S R+    + +      +   + +  +       + P G ++A   
Sbjct: 905  SVAFSPDSQILA--SGRD-DYTIGLWNLKTGECHPL-RGHQGRIRSVAFHPDGKILASGS 960

Query: 366  FSGEKFAIGVMKKDGSQE-RLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                     +   + S+  R L   +N      +SP   +L  S +   D   +L+  D 
Sbjct: 961  ADNTIKLWDISDTNHSKYIRTLTGHTNWVWTVVFSPDKHTLASSSE---DRTIRLWDKDT 1017



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 112/331 (33%), Gaps = 41/331 (12%)

Query: 119  EGKDRLRVEF------RLWDVKDRKQI-IGKKFFSSPASW------RKIAHTISDDIY-- 163
                R  +        RLWDV     + I + +     S       + +A    D     
Sbjct: 867  SPDGRTLISCSDDQTARLWDVITGNSLNILRGYTRDVYSVAFSPDSQILASGRDDYTIGL 926

Query: 164  --------QSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMD-RDGANIRYL--TPSRD 211
                      + G +G   S        +  SG   N++ + D  D  + +Y+       
Sbjct: 927  WNLKTGECHPLRGHQGRIRSVAFHPDGKILASGSADNTIKLWDISDTNHSKYIRTLTGHT 986

Query: 212  QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++   FSP++  +A ++ D      + L D       +++      +    FS +G R
Sbjct: 987  NWVWTVVFSPDKHTLASSSEDR----TIRLWDKDTGDCLQKLKGHSHWVWTVAFSPDG-R 1041

Query: 272  ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             L S   D  + I+ V       + LT+   +  S ++S D + +   S+    + + + 
Sbjct: 1042 ILASGSADSEIKIWDV-ASGKCLQTLTDPQGMIWSVAFSLDGTLLASASE---DQTVKLW 1097

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDS 390
                 +     +  E   +   +SP G  IA +        +  +      + L     +
Sbjct: 1098 NLKTGECVHTLKGHEKQVYSVAFSPNGQ-IAASGSEDTTVKLWDISTGSCVDTLKHGHTA 1156

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +++  +SP GR L        D   +L+ +
Sbjct: 1157 AIRSVAFSPDGRLLA---SGSEDEKIQLWDM 1184



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 61/147 (41%), Gaps = 13/147 (8%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T T+   +S  +SPD           G  ++ + Q++ + Q RI +   A  +   +SP 
Sbjct: 599 TETMSSVVSVKFSPDGKYFA-TGLMNG--EIRLWQTSDNKQLRIYKGHTAWVWAFAFSPD 655

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGS 416
             ++A +  +     +  +   G   + L +++N + +  +SP GR L  + +   D   
Sbjct: 656 SRMLA-SGSADSTIKLWDVHT-GECLKTLSKNTNKVYSVAFSPDGRILASASQ---DQTI 710

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWV 443
           KL+ I      +TLI    +     W 
Sbjct: 711 KLWDIATGNCQQTLIGHDDWV----WS 733



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/209 (12%), Positives = 67/209 (32%), Gaps = 14/209 (6%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   +       +++     +    D          S +++ +FS +GK    +   +  
Sbjct: 567 DFSGLTIWQAYFKEVKLKETIFANSDLTGSVFTETMSSVVSVKFSPDGKYFA-TGLMNGE 625

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + ++     +              + ++SPDS  +   S       + +   +  +  + 
Sbjct: 626 IRLWQTS-DNKQLRIYKGHTAWVWAFAFSPDSRMLASGS---ADSTIKLWDVHTGECLKT 681

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSP 399
                   +   +SP G ++A          I +        +  +   D  + + T+SP
Sbjct: 682 LSKNTNKVYSVAFSPDGRILASASQDQT---IKLWDIATGNCQQTLIGHDDWVWSVTFSP 738

Query: 400 --SGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               R L+ +     D   KL+ +   G+
Sbjct: 739 VTDDRPLLLASS-SADQHIKLWDV-ATGK 765


>gi|153006586|ref|YP_001380911.1| hypothetical protein Anae109_3748 [Anaeromyxobacter sp. Fw109-5]
 gi|152030159|gb|ABS27927.1| conserved hypothetical protein [Anaeromyxobacter sp. Fw109-5]
          Length = 1012

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 103/276 (37%), Gaps = 28/276 (10%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI--YQSITGEK---- 170
           +      + + FR  D +  +    + +     + R     +SD    ++S+   +    
Sbjct: 330 VSSADGNVLL-FRGIDRRKGR---ARLYLMDVRNPRSAIEIVSDSAPGFESLHPIEYGVI 385

Query: 171 GDFNSRILFVSESVVSGIIKNSLCV-MDRDGANIRYLTPSRDQI------------LFEP 217
           G  +  + F ++  +   +         ++G   R     R ++            + +P
Sbjct: 386 GLGHGILAFSAQDGIGDRLHVQRFRHRVKEGRPPRIELGRRRKLDVRAPSGAPFIQIADP 445

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  ++A+A    +    VY++  +     KR+ N   +     + ++G        
Sbjct: 446 AFSPDGSQIAFAGVSTDGQSDVYVVSVK-GGEAKRLTNDFYVEKDVAWGADGIYCSSDAT 504

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               M+++ +D  S A  RLT     +       D S ++F SD  GK  LY ++     
Sbjct: 505 DHGRMNLFRLDPSSGARTRLTTGPSTDRGPFPQEDGS-VLFSSDVAGKPDLYRLK--DGS 561

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +RI+ D       P  SP+G  +  + F G  F +
Sbjct: 562 IQRIT-DFTTGLTSPGPSPKGRGVFASTFYGGFFKL 596



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 73/187 (39%), Gaps = 8/187 (4%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSV 287
               +    R+ L   R        G     I  P FS +G +   + V  D   D+Y V
Sbjct: 411 HRVKEGRPPRIELGRRRKLDVRAPSGAPFIQIADPAFSPDGSQIAFAGVSTDGQSDVYVV 470

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDK 345
            ++    +RLTN  ++    ++  D   I   SD    G+  L+ +  +   + R++   
Sbjct: 471 SVKGGEAKRLTNDFYVEKDVAWGADG--IYCSSDATDHGRMNLFRLDPSSGARTRLTT-G 527

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            ++   P     G  + F+     K  +  +K DGS +R+    + L +P  SP GR + 
Sbjct: 528 PSTDRGPFPQEDGS-VLFSSDVAGKPDLYRLK-DGSIQRITDFTTGLTSPGPSPKGRGVF 585

Query: 406 FSRKKDG 412
            S    G
Sbjct: 586 ASTFYGG 592



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 56/140 (40%), Gaps = 11/140 (7%)

Query: 305 ISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              ++SPD SQI F     +G+  +YV+   G + KR++ D      D  W   G   + 
Sbjct: 443 ADPAFSPDGSQIAFAGVSTDGQSDVYVVSVKGGEAKRLTND-FYVEKDVAWGADGIYCSS 501

Query: 364 TKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSP--SGRSLIFSRKKDGDTGSKLYS 420
                 +  +  +    G++ RL    S  + P   P   G S++FS    G     LY 
Sbjct: 502 DATDHGRMNLFRLDPSSGARTRLTTGPSTDRGPF--PQEDG-SVLFSSDVAGK--PDLYR 556

Query: 421 IDLNGRNETLINTPAYASDP 440
           +  +G  + + +     + P
Sbjct: 557 LK-DGSIQRITDFTTGLTSP 575


>gi|209522641|ref|ZP_03271199.1| WD-40 repeat protein [Arthrospira maxima CS-328]
 gi|209496690|gb|EDZ96987.1| WD-40 repeat protein [Arthrospira maxima CS-328]
          Length = 1178

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 55/267 (20%), Positives = 111/267 (41%), Gaps = 24/267 (8%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             + V S      +   D  G N+       DQ +     SP+ + +A +++D+   +R++
Sbjct: 878  HQQVFSSSWGGEVYRWDMQG-NLLGSLEGHDQGVIGLAVSPDGEILATSSWDES--IRLW 934

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             M+  + +      +     LA  FS NG+    SV  D  + ++S             +
Sbjct: 935  NMEGELLKVINNAHSMGGNQLA--FSPNGEVIA-SVGNDNKVKLWS--RVGEFLREWEYS 989

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              I    ++SPD   +V  S+     ++ V+  +GS   R+  + + S +   +SPQGD+
Sbjct: 990  ESI-TGIAFSPDGKMVVTGSE---DTEVRVVYIDGSG-TRLIGNHQGSVWGVAFSPQGDM 1044

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            IA          + +   DG +  +L     +    +SP G+ +  +     D   +L++
Sbjct: 1045 IASASTDNT---LRLWFLDGREPIVLHHQGTVDKVAFSPDGQMIASASW---DGTIQLWT 1098

Query: 421  -----IDLNGRNETLINTPAYASDPQW 442
                 I    R++  + T A+++D +W
Sbjct: 1099 NEGVKIRTLIRHQGSVRTVAFSNDGKW 1125



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 84/236 (35%), Gaps = 24/236 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDT 244
            +     S+ + + +G  ++ +  +      +  FSPN + +A    D++  +        
Sbjct: 924  TSSWDESIRLWNMEGELLKVINNAHSMGGNQLAFSPNGEVIASVGNDNKVKLWSRVGEFL 983

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            R     + I           FS +GK  +      E  ++  V +  + T  + N     
Sbjct: 984  REWEYSESITGI-------AFSPDGKMVV---TGSEDTEVRVVYIDGSGTRLIGNHQGSV 1033

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               ++SP    I   S       L +   +G +   I    + +     +SP G +IA  
Sbjct: 1034 WGVAFSPQGDMIASAST---DNTLRLWFLDGREP--IVLHHQGTVDKVAFSPDGQMIASA 1088

Query: 365  KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             + G    I +   +G + R L+    +++   +S  G+ +I      GD    + 
Sbjct: 1089 SWDGT---IQLWTNEGVKIRTLIRHQGSVRTVAFSNDGKWMI----SGGDDNQVII 1137



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 105/288 (36%), Gaps = 24/288 (8%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            +  I       S   WR+    +++ +  + +  K  F+     ++ +   G +K  L 
Sbjct: 672 GQDTIATTSTKGSIKLWRRDGTLLNEFVGHTKSLTKIAFSPDGNRLASASNDGRVK--LW 729

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            +   G  +        Q +    FSP+ Q +A          ++ L     +R+   +G
Sbjct: 730 EI---GGELVASFEHSQQAVEALAFSPDGQYIA----AGGQDRQLKLWSIN-ERSAIVLG 781

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             ++ I    FS +G     S   D ++ ++S D      +   +        S+SPD  
Sbjct: 782 EHQNSIRTVAFSPDGNIIA-SGSWDRSIRLWSPD--GRHLQTFASHTAPMTQLSFSPDGE 838

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   +D  G+ +L+ +++       +    + +    V++P    +  + + GE +   
Sbjct: 839 TLA-SADFHGEVKLWKVKNRFFT---VLSGHQDNVRATVFTPDHQQVFSSSWGGEVYRWD 894

Query: 375 VM-KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +     GS E     D  +     SP G  L  S     D   +L+++
Sbjct: 895 MQGNLLGSLE---GHDQGVIGLAVSPDGEILATSSW---DESIRLWNM 936


>gi|193215177|ref|YP_001996376.1| WD40 domain-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193088654|gb|ACF13929.1| WD40 domain protein beta Propeller [Chloroherpeton thalassium ATCC
           35110]
          Length = 1147

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 78/216 (36%), Gaps = 18/216 (8%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           + +   +  S  I+    +   D         +  Q L  P FSP+ ++  +    ++D 
Sbjct: 426 LFYSKYTGTSFKIQKFNDLFTFDLEKKEETRLTYQQRLETPVFSPDGKR--FVARTEKDG 483

Query: 237 LRVYLMDT----RIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               +          +  +++  + +   +  P +S++G R   ++       +  +  +
Sbjct: 484 TANLIEGLFSADTAAQHLQKLTQYENGEQVFTPVYSADGSRIFFALGVRNQRRLMQLVRK 543

Query: 291 SNATERLTNT--------LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +   + L +            +   + SPD   + F SDR G   +Y +       ++++
Sbjct: 544 TGEVKPLFDATESQNAELPVDDRDPALSPDGHFLYFASDRSGIFNIYRLNFETGKTEQLT 603

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                ++   V S     +A+  F+ + + I VM  
Sbjct: 604 NVLGGAFMPSVDSAG--HLAYATFTSDGYKIAVMNA 637



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 56/391 (14%), Positives = 130/391 (33%), Gaps = 62/391 (15%)

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNS-LGAQVLVTGRVIKEGKDRLRVEFR 129
            DL       ++      + +    +   +Q+W + L    L   + ++           
Sbjct: 271 ADLT------VLDASDALEIVYEKPAEAIYQEWKNDLKQDYLARTQKVRA---------- 314

Query: 130 LWDVKDRKQIIGKKFFSSP-------ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
             ++++ + +    + ++         S    ++  +D   QS+          I   + 
Sbjct: 315 --NLQEGRVVAKVGYLNTNPLFSADGKSLFYTSNLGADFSAQSLVM-SDVEKDSIFSKTT 371

Query: 183 SVVSGIIKNSLCVMDRD---GANI----RYLTPSRD----QILFEPRFSPNQQKVAY--- 228
           +  + + K +L  +  D   G        + +P+RD     +    + S +   + Y   
Sbjct: 372 ASSNALHKTTLAELPVDVHAGGTCKVCGHHFSPNRDVLNGGVGSRLQLSADGNTLFYSKY 431

Query: 229 --ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-- 284
              ++  +    ++  D       +    ++  +  P FS +GKR +   +KD   ++  
Sbjct: 432 TGTSFKIQKFNDLFTFDLEKKEETRL--TYQQRLETPVFSPDGKRFVARTEKDGTANLIE 489

Query: 285 --YSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             +S D  +   ++LT         +  YS D S+I F      + +L  +     + K 
Sbjct: 490 GLFSADTAAQHLQKLTQYENGEQVFTPVYSADGSRIFFALGVRNQRRLMQLVRKTGEVKP 549

Query: 341 ISQDKEA-------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNL 392
           +    E+          DP  SP G  + F       F I  +  +  +   L       
Sbjct: 550 LFDATESQNAELPVDDRDPALSPDGHFLYFASDRSGIFNIYRLNFETGKTEQLTNVLGGA 609

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             P+   +G  L ++       G K+  ++ 
Sbjct: 610 FMPSVDSAG-HLAYATFTSD--GYKIAVMNA 637


>gi|313159781|gb|EFR59137.1| peptidase, S9A/B/C family, catalytic domain protein [Alistipes sp.
           HGB5]
          Length = 710

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 9/116 (7%)

Query: 258 SMILAPRFSSNGKRALIS------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           S   +   S +G+  L +       +      I+  DL + A  RLT+T   N    +S 
Sbjct: 51  SRAGSSSLSPDGRTLLYAQTDYNMAENRGVTTIWVEDLATKAVTRLTDTASNNADPKWSA 110

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKF 366
           D  +I F SDR G  Q++ M   G + +++S  DK+   F    SP+GD   + + 
Sbjct: 111 DGEKIYFLSDRSGSMQVWEMTPAGGNARQLSAFDKDVEGFG--ISPRGDKAWYVQR 164



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 85/282 (30%), Gaps = 80/282 (28%)

Query: 220 SPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ + + YA  D        +  +++ D    +A  R+ +  S    P++S++G++   
Sbjct: 59  SPDGRTLLYAQTDYNMAENRGVTTIWVEDLAT-KAVTRLTDTASNNADPKWSADGEKIYF 117

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--------------- 319
              +  +M ++ +        +L+           SP   +  +                
Sbjct: 118 LSDRSGSMQVWEMTPAGGNARQLSAFDKDVEGFGISPRGDKAWYVQRVEVCDRKSSDVYK 177

Query: 320 --------------------SDREGKEQLYVMQ--SNGSDQKRISQDKEASYFDP----- 352
                                D      ++V    + G         K+A++  P     
Sbjct: 178 DMDKSKARIYDDLMARHWNYWDEGSYLHIFVGDFGAEGLKPGVDIIGKDAAWDAPLAPYF 237

Query: 353 -----VWSPQGDLIAFT--KFSGEKF------AIGVMKKDGSQERLL------------- 386
                 W+  G ++A+T    +G ++       I V   +    + +             
Sbjct: 238 DMAEIAWNNAGTMLAYTCKPLTGTEYAVSTDSDIFVYVLENGVTQNICKPVNVNTGEPIA 297

Query: 387 ---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGS---KLYSID 422
                    + P WSP  R + F  ++     S   +L+  D
Sbjct: 298 DMATMAGYDKYPVWSPDDRQIAFLSQRRAGNESDKARLFLYD 339



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 11/134 (8%)

Query: 306 SASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S+S SPD   +++       ++  G   ++V         R++ D  ++  DP WS  G+
Sbjct: 55  SSSLSPDGRTLLYAQTDYNMAENRGVTTIWVEDLATKAVTRLT-DTASNNADPKWSADGE 113

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD--GDTGS 416
            I F         +  M   G   R L   D +++    SP G    + ++ +      S
Sbjct: 114 KIYFLSDRSGSMQVWEMTPAGGNARQLSAFDKDVEGFGISPRGDKAWYVQRVEVCDRKSS 173

Query: 417 KLYSIDLNGRNETL 430
            +Y  D++     +
Sbjct: 174 DVYK-DMDKSKARI 186



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 55/149 (36%), Gaps = 9/149 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYS-VDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
             S++    +  ++     +I   V++ +      +      +    +SPD  QI F S 
Sbjct: 264 AVSTDSDIFVYVLENGVTQNICKPVNVNTGEPIADMATMAGYDKYPVWSPDDRQIAFLSQ 323

Query: 322 R-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           R       K +L++     +  + +++D + +  + VWS   D++ F         I  +
Sbjct: 324 RRAGNESDKARLFLYDCQTAQMQDLTEDFDYNAMNVVWS-GSDMLYFIAPIEATHQICRI 382

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                +  ++    +     +S +G  + 
Sbjct: 383 APSVGEVEVVTR-GDHDINAFSMAGDRIA 410



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 59/189 (31%), Gaps = 18/189 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S +     Y   +         ++         +         P +S + ++     Q
Sbjct: 264 AVSTDSDIFVYVLENGVTQNICKPVNVNTGEPIADMATMAGYDKYPVWSPDDRQIAFLSQ 323

Query: 278 K-----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +      +   ++  D Q+   + LT     N        S  + F +  E   Q+  + 
Sbjct: 324 RRAGNESDKARLFLYDCQTAQMQDLTEDFDYNAMNVVWSGSDMLYFIAPIEATHQICRIA 383

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFSGEKFAIGVMKKDGSQERLLVE 388
            +  + + +++     +    +S  GD IA        + E F   V   DG+    L +
Sbjct: 384 PSVGEVEVVTR---GDHDINAFSMAGDRIAAEMCTISMATEFFD--VNPADGT----LTQ 434

Query: 389 DSNLQAPTW 397
            S +  P +
Sbjct: 435 ISAINKPVY 443



 Score = 36.9 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 29/60 (48%), Gaps = 5/60 (8%)

Query: 390 SNLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
           S   + + SP GR+L++++      +    + ++  DL  +    L +T +  +DP+W  
Sbjct: 51  SRAGSSSLSPDGRTLLYAQTDYNMAENRGVTTIWVEDLATKAVTRLTDTASNNADPKWSA 110


>gi|198275305|ref|ZP_03207836.1| hypothetical protein BACPLE_01466 [Bacteroides plebeius DSM 17135]
 gi|198271888|gb|EDY96158.1| hypothetical protein BACPLE_01466 [Bacteroides plebeius DSM 17135]
          Length = 708

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 88/281 (31%), Gaps = 69/281 (24%)

Query: 220 SPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ +++AY        +++  L +Y+M+       + +    +    P +  NG +   
Sbjct: 63  SPDGKRIAYTVSYYSVKENKSHLVIYVMNADGSGN-QLLTTTAASEGEPAWIKNGSKLAF 121

Query: 275 -SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-------- 325
            +   D    I+ ++   +   +L++         +SPD S+++F S  +          
Sbjct: 122 LAPDADGNSQIWEMNPDGSERVQLSSFAGGIDGFKFSPDESKVLFISQVKYGERTVDKYP 181

Query: 326 -------------------------EQLYVMQSNGSDQKRISQ-----------DKEASY 349
                                       +V    G+     +                  
Sbjct: 182 DLDKASGMVIDDLMYKHWDEWVQTVPHPFVAPFAGNKVGEATDILAGAPYESPMKPFGGI 241

Query: 350 FDPVWSPQGDLIAFTKFSGEKFA--------IGVMKKDGSQERLLVED-------SNLQA 394
               WSP    IA+T                I +   +  Q R L ++            
Sbjct: 242 EQLTWSPDSKCIAYTCRKKTGLEYAISTDSDIYLYNLETKQTRNLCKEDATDKNMGYDTN 301

Query: 395 PTWSPSGRSLIF-SRKKDG--DTGSKLYSIDLNGRNETLIN 432
           P +SP G  + + S +++G     ++L  +DL    +T + 
Sbjct: 302 PQFSPDGGFIAWQSMERNGYESDRNRLCVMDLKNGKKTYVT 342



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 45/282 (15%), Positives = 89/282 (31%), Gaps = 67/282 (23%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD----- 283
           A   D  I+    +  +  R           I +   S +GKR   +V      +     
Sbjct: 26  AAQTDGPIIGKQEVTVKDGRMTPETLWAMGRIGSSCVSPDGKRIAYTVSYYSVKENKSHL 85

Query: 284 -IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRI 341
            IY ++   +  + LT T       ++  + S++ F + D +G  Q++ M  +GS++ ++
Sbjct: 86  VIYVMNADGSGNQLLTTTAASEGEPAWIKNGSKLAFLAPDADGNSQIWEMNPDGSERVQL 145

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSG--------------------------------- 368
           S           +SP    + F                                      
Sbjct: 146 SSFAGGIDGFK-FSPDESKVLFISQVKYGERTVDKYPDLDKASGMVIDDLMYKHWDEWVQ 204

Query: 369 EKFAIGVMKKDG---SQERLLVEDSNLQAP----------TWSPSGRSLIFS-RKKDG-- 412
                 V    G    +   ++  +  ++P          TWSP  + + ++ RKK G  
Sbjct: 205 TVPHPFVAPFAGNKVGEATDILAGAPYESPMKPFGGIEQLTWSPDSKCIAYTCRKKTGLE 264

Query: 413 ---DTGSKLYSIDLNGRNETLI-------NTPAYASDPQWVG 444
               T S +Y  +L  +    +           Y ++PQ+  
Sbjct: 265 YAISTDSDIYLYNLETKQTRNLCKEDATDKNMGYDTNPQFSP 306



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 102/306 (33%), Gaps = 65/306 (21%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------D 232
                 + +  M+ DG+    L+     I    +FSP++ KV + +             D
Sbjct: 124 PDADGNSQIWEMNPDGSERVQLSSFAGGIDGF-KFSPDESKVLFISQVKYGERTVDKYPD 182

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAP----------------------------- 263
            +    + + D       + +       +AP                             
Sbjct: 183 LDKASGMVIDDLMYKHWDEWVQTVPHPFVAPFAGNKVGEATDILAGAPYESPMKPFGGIE 242

Query: 264 --RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERL-----TN-TLFINISA 307
              +S + K    + +K            DIY  +L++  T  L     T+  +  + + 
Sbjct: 243 QLTWSPDSKCIAYTCRKKTGLEYAISTDSDIYLYNLETKQTRNLCKEDATDKNMGYDTNP 302

Query: 308 SYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +SPD   I ++S +R G    + +L VM      +  +++  ++      W+P    + 
Sbjct: 303 QFSPDGGFIAWQSMERNGYESDRNRLCVMDLKNGKKTYVTESFQSGVDSYCWAPDNQTLY 362

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           FT        I      G  E+L     +  +      G+ L  +++       +L++++
Sbjct: 363 FTGVWHATSMIHRTNLKGEVEQLTEGMYDYASVEMLGDGQLL--TKRHSISEADELFTVN 420

Query: 423 LNGRNE 428
           LN  NE
Sbjct: 421 LNKANE 426



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 54/323 (16%), Positives = 104/323 (32%), Gaps = 71/323 (21%)

Query: 176 RILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           RI +     SV        + VM+ DG+  + LT +      EP +  N  K+A+   D 
Sbjct: 68  RIAYTVSYYSVKENKSHLVIYVMNADGSGNQLLTTTAAS-EGEPAWIKNGSKLAFLAPDA 126

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------KDEAMDI-- 284
           +   +++ M+        ++ +F   I   +FS +  + L   Q        D+  D+  
Sbjct: 127 DGNSQIWEMNPD-GSERVQLSSFAGGIDGFKFSPDESKVLFISQVKYGERTVDKYPDLDK 185

Query: 285 ------------------------YSVDLQSNATERLTN--TLFINISA----------S 308
                                   +      N     T+        S           +
Sbjct: 186 ASGMVIDDLMYKHWDEWVQTVPHPFVAPFAGNKVGEATDILAGAPYESPMKPFGGIEQLT 245

Query: 309 YSPDSSQIVFE-SDREG-------KEQLYVMQSNGSDQKRI-----SQDKEASYFDPVWS 355
           +SPDS  I +    + G          +Y+        + +     +        +P +S
Sbjct: 246 WSPDSKCIAYTCRKKTGLEYAISTDSDIYLYNLETKQTRNLCKEDATDKNMGYDTNPQFS 305

Query: 356 PQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSR 408
           P G  IA+       +      + VM     ++  + E   S + +  W+P  ++L F+ 
Sbjct: 306 PDGGFIAWQSMERNGYESDRNRLCVMDLKNGKKTYVTESFQSGVDSYCWAPDNQTLYFTG 365

Query: 409 KKDGDTGSKLYSIDLNGRNETLI 431
                  S ++  +L G  E L 
Sbjct: 366 V--WHATSMIHRTNLKGEVEQLT 386



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 65/195 (33%), Gaps = 22/195 (11%)

Query: 218 RFSPNQQKVAYA-------TYDDEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRF 265
            +SP+ + +AY         Y       +YL +    +                   P+F
Sbjct: 245 TWSPDSKCIAYTCRKKTGLEYAISTDSDIYLYNLETKQTRNLCKEDATDKNMGYDTNPQF 304

Query: 266 SSNGKRALI-SVQKDE----AMDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVF 318
           S +G      S++++        +  +DL++     +T +    ++ S  ++PD+  + F
Sbjct: 305 SPDGGFIAWQSMERNGYESDRNRLCVMDLKNGKKTYVTESFQSGVD-SYCWAPDNQTLYF 363

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                    ++     G + ++++ +    Y        G L+       E   +  +  
Sbjct: 364 TGVWHATSMIHRTNLKG-EVEQLT-EGMYDYASVEMLGDGQLLTKRHSISEADELFTVNL 421

Query: 379 DGSQERLLVEDSNLQ 393
           + + E   +   N  
Sbjct: 422 NKANEVTRITQENDH 436



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 59/146 (40%), Gaps = 6/146 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           T         P+FSP+   +A+ + +      D  R+ +MD +  +      +F+S + +
Sbjct: 292 TDKNMGYDTNPQFSPDGGFIAWQSMERNGYESDRNRLCVMDLKNGKKTYVTESFQSGVDS 351

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             ++ + +    +        I+  +L+    E+LT  ++   S     D   +      
Sbjct: 352 YCWAPDNQTLYFTGVWHATSMIHRTNLK-GEVEQLTEGMYDYASVEMLGDGQLLTKRHSI 410

Query: 323 EGKEQLYVMQSN-GSDQKRISQDKEA 347
              ++L+ +  N  ++  RI+Q+ + 
Sbjct: 411 SEADELFTVNLNKANEVTRITQENDH 436


>gi|21228732|ref|NP_634654.1| hypothetical protein MM_2630 [Methanosarcina mazei Go1]
 gi|20907242|gb|AAM32326.1| conserved protein [Methanosarcina mazei Go1]
          Length = 937

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 80/227 (35%), Gaps = 18/227 (7%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDE 280
             ++ +  Y    I  V+                +       F  +  G R +    ++ 
Sbjct: 593 GDRIVWQEYR-STIPGVWDKADIHMYNLSTSTEIQITDSGQAFCPDIYGDRIVWKDIRNG 651

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----QLYVMQSNGS 336
             DIY  DL ++   R+T         S      ++V++  R G       +Y+   + S
Sbjct: 652 KADIYMYDLSTSKETRITTNESYQGDPSIY--GDKVVWQDSRNGDGYNPADIYMYDLSTS 709

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAP 395
            + +I+ D    Y   ++   GD I +  +    + I +     S+E R+ ++  + + P
Sbjct: 710 REIQITHDDSDQYSPAIY---GDSIVWADWRNRGWDIYMYNISTSRETRITIDKGSQEYP 766

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQ 441
                G  + +   ++      +Y  DL+   ET I +      +P 
Sbjct: 767 AI--YGDKIAWVDSRNN--NPDIYLYDLSTHVETRITSNNSVQLNPA 809



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 17/155 (10%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++T       S +       IVF  DR G   +YV   + S + +I+ ++         +
Sbjct: 533 QITTNKSNQTSPAIY--GDNIVFFDDRGGYYNIYVYNLSTSRESQITFNETYYNTATGPA 590

Query: 356 PQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--GRSLIFS 407
             GD I + ++        +K  I +     S E  + +        + P   G  +++ 
Sbjct: 591 IYGDRIVWQEYRSTIPGVWDKADIHMYNLSTSTEIQITDSGQ----AFCPDIYGDRIVWK 646

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQ 441
             ++G   + +Y  DL+   ET I T  +Y  DP 
Sbjct: 647 DIRNGK--ADIYMYDLSTSKETRITTNESYQGDPS 679



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 76/205 (37%), Gaps = 27/205 (13%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFIN--ISAS 308
           +I   +S   +P     G   +    +    +IY  +L ++   ++T N  + N     +
Sbjct: 533 QITTNKSNQTSPAIY--GDNIVFFDDRGGYYNIYVYNLSTSRESQITFNETYYNTATGPA 590

Query: 309 YSPDSSQIVFESDREGKEQLY------VMQSNGSDQKRISQDKEASYFDPVWSPQ--GDL 360
                 +IV++  R     ++      +   + S + +I+   +A      + P   GD 
Sbjct: 591 IY--GDRIVWQEYRSTIPGVWDKADIHMYNLSTSTEIQITDSGQA------FCPDIYGDR 642

Query: 361 IAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIF--SRKKDGDTGSK 417
           I +      K  I +     S+E R+   +S    P+    G  +++  SR  DG   + 
Sbjct: 643 IVWKDIRNGKADIYMYDLSTSKETRITTNESYQGDPSI--YGDKVVWQDSRNGDGYNPAD 700

Query: 418 LYSIDL-NGRNETLINTPAYASDPQ 441
           +Y  DL   R   + +  +    P 
Sbjct: 701 IYMYDLSTSREIQITHDDSDQYSPA 725



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 14/163 (8%)

Query: 223 QQKVAYATYDDEDILR---VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
             KV +    + D      +Y+ D    R  + I +  S   +P     G   + +  ++
Sbjct: 682 GDKVVWQDSRNGDGYNPADIYMYDLSTSREIQ-ITHDDSDQYSPAIY--GDSIVWADWRN 738

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              DIY  ++ ++   R+T         +      +I +   R     +Y+   +   + 
Sbjct: 739 RGWDIYMYNISTSRETRITIDKGSQEYPAIY--GDKIAWVDSRNNNPDIYLYDLSTHVET 796

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAIGVMKKD 379
           RI+ +        ++   GD I +T +  E      + V  KD
Sbjct: 797 RITSNNSVQLNPAIY---GDRIVWTDWRNEYKQNDHLYVTNKD 836



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 63/177 (35%), Gaps = 16/177 (9%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            +S  G+   +  ++++       G     + + D   +    +T          ++SP 
Sbjct: 671 NESYQGDPSIYGDKVVWQDSRNGDGYNPADIYMYDLSTSREIQITHDDSD-----QYSPA 725

Query: 223 --QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
                + +A + +     +Y+ +    R   RI   +     P     G +      ++ 
Sbjct: 726 IYGDSIVWADWRNRG-WDIYMYNISTSRET-RITIDKGSQEYPAIY--GDKIAWVDSRNN 781

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---KEQLYVMQSN 334
             DIY  DL ++   R+T+   + ++ +      +IV+   R      + LYV   +
Sbjct: 782 NPDIYLYDLSTHVETRITSNNSVQLNPAIY--GDRIVWTDWRNEYKQNDHLYVTNKD 836


>gi|17229616|ref|NP_486164.1| WD-40 repeat-containing protein [Nostoc sp. PCC 7120]
 gi|20532307|sp|Q8YV57|Y2124_ANASP RecName: Full=Uncharacterized WD repeat-containing protein all2124
 gi|17131215|dbj|BAB73823.1| WD-40 repeat protein [Nostoc sp. PCC 7120]
          Length = 1683

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 92/254 (36%), Gaps = 18/254 (7%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             + G  +  I    +++ SG +  ++ +  RDG  +       +  ++   FSP+ Q +A
Sbjct: 1071 HKDGVISISISRDGQTIASGSLDKTIKLWSRDG-RLFRTLNGHEDAVYSVSFSPDGQTIA 1129

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                       + L  T      K I      +    FS +GK    S   D ++ ++  
Sbjct: 1130 ----SGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLA-SASSDHSIKLW-- 1182

Query: 288  DLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D  S      LT      I+  +SPD   I   S+    + + +         +     +
Sbjct: 1183 DTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSE---DKTVKLWHRQDGKLLKTLNGHQ 1239

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
                   +SP G  +A +  + +   +  +  DG   + L   + ++    +S  G+++ 
Sbjct: 1240 DWVNSLSFSPDGKTLA-SASADKTIKLWRI-ADGKLVKTLKGHNDSVWDVNFSSDGKAIA 1297

Query: 406  FSRKKDGDTGSKLY 419
             + +   D   KL+
Sbjct: 1298 SASR---DNTIKLW 1308



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/237 (19%), Positives = 92/237 (38%), Gaps = 17/237 (7%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            RDG  ++ L    D  + +  FSP+ + +A A+ D+     V L +    +  K +    
Sbjct: 1434 RDGKALKTLI-GHDNEVNKVNFSPDGKTLASASRDN----TVKLWNVSDGKFKKTLKGHT 1488

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              +    FS +GK    S   D+ + ++      N  + L     +  S +++PD S + 
Sbjct: 1489 DEVFWVSFSPDGKIIA-SASADKTIRLWD-SFSGNLIKSLPAHNDLVYSVNFNPDGSMLA 1546

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              S     + + + +S+               +   +SP G  IA          + + +
Sbjct: 1547 STS---ADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKT---VKIWQ 1600

Query: 378  KDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             DG     L    + + +  +SP G++LI       DT +K++  D      + +NT
Sbjct: 1601 IDGHLLTTLPQHQAGVMSAIFSPDGKTLI---SGSLDTTTKIWRFDSQQAKTSQMNT 1654



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 94/282 (33%), Gaps = 31/282 (10%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTI------SDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D + I       +   W +            D +Y       G          +++ SG 
Sbjct: 1083 DGQTIASGSLDKTIKLWSRDGRLFRTLNGHEDAVYSVSFSPDG----------QTIASGG 1132

Query: 189  IKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               ++ +    DG  ++ +T   +Q +    FSP+ + +A A+ D      + L DT   
Sbjct: 1133 SDKTIKLWQTSDGTLLKTIT-GHEQTVNNVYFSPDGKNLASASSDH----SIKLWDTTSG 1187

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            +    +    + ++  RFS +G+    +  +D+ + ++         + L        S 
Sbjct: 1188 QLLMTLTGHSAGVITVRFSPDGQTIA-AGSEDKTVKLW-HRQDGKLLKTLNGHQDWVNSL 1245

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            S+SPD   +   S     + + + +       +  +    S +D  +S  G  IA     
Sbjct: 1246 SFSPDGKTLASAS---ADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRD 1302

Query: 368  GEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
                 I +  + G +          + A  + P    +  + 
Sbjct: 1303 NT---IKLWNRHGIELETFTGHSGGVYAVNFLPDSNIIASAS 1341



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 81/241 (33%), Gaps = 20/241 (8%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             R         +     S + Q +A  + D      + L  +R  R  + +      + +
Sbjct: 1064 ERNRLEGHKDGVISISISRDGQTIASGSLDK----TIKLW-SRDGRLFRTLNGHEDAVYS 1118

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              FS +G+    S   D+ + ++         + +T       +  +SPD   +   S  
Sbjct: 1119 VSFSPDGQTIA-SGGSDKTIKLWQTS-DGTLLKTITGHEQTVNNVYFSPDGKNLASASS- 1175

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                 + +  +             A      +SP G  IA      +   +   ++DG  
Sbjct: 1176 --DHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGS-EDKTVKLW-HRQDGKL 1231

Query: 383  ERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             + L    +   + ++SP G++L        D   KL+ I  +G+   L+ T    +D  
Sbjct: 1232 LKTLNGHQDWVNSLSFSPDGKTLA---SASADKTIKLWRI-ADGK---LVKTLKGHNDSV 1284

Query: 442  W 442
            W
Sbjct: 1285 W 1285



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 58/345 (16%), Positives = 124/345 (35%), Gaps = 29/345 (8%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
            ++  S  + I +       + WN  G ++               V F    + D   I  
Sbjct: 1287 VNFSSDGKAIASASRDNTIKLWNRHGIELE---TFTGHSGGVYAVNF----LPDSNIIAS 1339

Query: 142  KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDG 200
                ++   W++    IS    + + G  G +    L     + +     ++ +   +DG
Sbjct: 1340 ASLDNTIRLWQR--PLISP--LEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDG 1395

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            + ++ L    ++ ++   F+P    +A A  D      V +   R  +A K +    + +
Sbjct: 1396 SLLKTLP--GNKAIYGISFTPQGDLIASANADK----TVKIWRVRDGKALKTLIGHDNEV 1449

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                FS +GK    S  +D  + +++V       + L          S+SPD   I   S
Sbjct: 1450 NKVNFSPDGKTLA-SASRDNTVKLWNVS-DGKFKKTLKGHTDEVFWVSFSPDGKIIASAS 1507

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                 + + +  S   +  +         +   ++P G ++A T  + +   +     DG
Sbjct: 1508 ---ADKTIRLWDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTS-ADKTVKLWRSH-DG 1562

Query: 381  SQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                     SN + + ++SP GR +  + +   D   K++ ID +
Sbjct: 1563 HLLHTFSGHSNVVYSSSFSPDGRYIASASE---DKTVKIWQIDGH 1604



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 83/232 (35%), Gaps = 19/232 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ S    N++ + +      +         +F   FSP+ + +A A+ D      + L
Sbjct: 1459 KTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADK----TIRL 1514

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D+      K +     ++ +  F+ +G     S   D+ + ++      +     +   
Sbjct: 1515 WDSFSGNLIKSLPAHNDLVYSVNFNPDGSMLA-STSADKTVKLWR-SHDGHLLHTFSGHS 1572

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +  S+S+SPD   I   S+    + + + Q +G     +    +A     ++SP G  +
Sbjct: 1573 NVVYSSSFSPDGRYIASASE---DKTVKIWQIDGHLLTTL-PQHQAGVMSAIFSPDGKTL 1628

Query: 362  AFTKFSGEK--FAIGVMKKDGSQERLLV-------EDSNLQAPTWSPSGRSL 404
                       +     +   SQ   LV       +D     P  +P+ + L
Sbjct: 1629 ISGSLDTTTKIWRFDSQQAKTSQMNTLVMSACNWLQDYLNTNPNVTPNEQKL 1680



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 38/199 (19%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             RLWD      I               AH   D +Y       G           +  S 
Sbjct: 1512 IRLWDSFSGNLIKSLP-----------AHN--DLVYSVNFNPDGS--------MLASTSA 1550

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                 L     DG  + +       +++   FSP+ + +A A+ D    ++++ +D    
Sbjct: 1551 DKTVKLWRSH-DGH-LLHTFSGHSNVVYSSSFSPDGRYIASASED--KTVKIWQID---G 1603

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-------- 299
                 +   ++ +++  FS +GK   IS   D    I+  D Q   T ++          
Sbjct: 1604 HLLTTLPQHQAGVMSAIFSPDGKTL-ISGSLDTTTKIWRFDSQQAKTSQMNTLVMSACNW 1662

Query: 300  -TLFINISASYSPDSSQIV 317
               ++N + + +P+  ++ 
Sbjct: 1663 LQDYLNTNPNVTPNEQKLC 1681


>gi|315608950|ref|ZP_07883922.1| prolyl oligopeptidase [Prevotella buccae ATCC 33574]
 gi|315249330|gb|EFU29347.1| prolyl oligopeptidase [Prevotella buccae ATCC 33574]
          Length = 723

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 79/234 (33%), Gaps = 63/234 (26%)

Query: 266 SSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +G+R    V      +      +Y +D       +LT        A++     +I F 
Sbjct: 56  SPDGRRIAYQVGYYSVKENKGHQILYVMDADGKNIRQLTTDAKNETDAAWIEGGRRIAFL 115

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI------------------ 361
             R+G  QL+ M ++G+ +++++ DK        +SP G  +                  
Sbjct: 116 --RDG--QLWAMNADGTGRRQLTNDK-TDIEGFKFSPDGRHVLLIKSLPYHGTIKANPTD 170

Query: 362 -------AFTKFSGEKFAIGVM-------------KKDGSQERL--------LVEDSNLQ 393
                    T  +   +   V              K DG  + L        L     ++
Sbjct: 171 LPKATGRLVTDMNYRHWDHYVETIAHPFVAEVNDGKVDGGVDILEGQPYESPLAPFGGIE 230

Query: 394 APTWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              WS   + + ++ RKK+G      T + +Y  +++ R    +  PA   +P 
Sbjct: 231 QFDWSKDSKCVAYTCRKKEGVQYAISTDADIYLYNIDTRETRNLCKPADYREPA 284



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 51/338 (15%), Positives = 105/338 (31%), Gaps = 95/338 (28%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        L VMD DG NIR LT        +  +    +++A+             
Sbjct: 69  YSVKENKGHQILYVMDADGKNIRQLTTDAKN-ETDAAWIEGGRRIAFLRDGQ------LW 121

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTN 299
                    +++ N ++ I   +FS +G+  L+  S+     +     DL       +T+
Sbjct: 122 AMNADGTGRRQLTNDKTDIEGFKFSPDGRHVLLIKSLPYHGTIKANPTDLPKATGRLVTD 181

Query: 300 --------------------------TLFINI-------SA----------SYSPDSSQI 316
                                        ++I       S            +S DS  +
Sbjct: 182 MNYRHWDHYVETIAHPFVAEVNDGKVDGGVDILEGQPYESPLAPFGGIEQFDWSKDSKCV 241

Query: 317 VFE-SDREGKE-------QLYVMQSNGSDQKRISQDKE---------------------- 346
            +    +EG +        +Y+   +  + + + +  +                      
Sbjct: 242 AYTCRKKEGVQYAISTDADIYLYNIDTRETRNLCKPADYREPAIDATKTMKTQAVNHQSG 301

Query: 347 ----ASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAP 395
                   +P +SP G  IA+   +   +      + V      +++ + E  DSN++  
Sbjct: 302 DMNVGYDVNPRFSPDGKYIAWQSMAHNGYESDRNRLCVYDLRTGEKKYVAESFDSNVEDF 361

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            W+   R+L F           +Y  +L+G+ + L + 
Sbjct: 362 CWAADSRTLYFLGI--WHACVMVYQTNLDGQVKQLTDG 397



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/314 (11%), Positives = 84/314 (26%), Gaps = 93/314 (29%)

Query: 220 SPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ +++AY     +  +    ++  +     +  +++           +   G+R    
Sbjct: 56  SPDGRRIAYQVGYYSVKENKGHQILYVMDADGKNIRQLTTDAKNETDAAWIEGGRRIAF- 114

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN- 334
             +D    +++++       +LTN         +SPD   ++          +    ++ 
Sbjct: 115 -LRDG--QLWAMNADGTGRRQLTNDKTDIEGFKFSPDGRHVLLIKSLPYHGTIKANPTDL 171

Query: 335 GSDQKRISQDKEASYFDP------------------------------------------ 352
                R+  D    ++D                                           
Sbjct: 172 PKATGRLVTDMNYRHWDHYVETIAHPFVAEVNDGKVDGGVDILEGQPYESPLAPFGGIEQ 231

Query: 353 -VWSPQGDLIAFTKFSGEKFA--------IGVMKKDGSQERLLVEDSNLQAPT------- 396
             WS     +A+T    E           I +   D  + R L + ++ + P        
Sbjct: 232 FDWSKDSKCVAYTCRKKEGVQYAISTDADIYLYNIDTRETRNLCKPADYREPAIDATKTM 291

Query: 397 ---------------------WSPSGRSLIFSRKKDGDTGS---KLYSIDL-NGRNETLI 431
                                +SP G+ + +         S   +L   DL  G  + + 
Sbjct: 292 KTQAVNHQSGDMNVGYDVNPRFSPDGKYIAWQSMAHNGYESDRNRLCVYDLRTGEKKYVA 351

Query: 432 NT-PAYASDPQWVG 444
            +  +   D  W  
Sbjct: 352 ESFDSNVEDFCWAA 365



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 52/366 (14%), Positives = 102/366 (27%), Gaps = 101/366 (27%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            G        R    +V +         QI+   +                   + +T +
Sbjct: 50  IGGAQASPDGRRIAYQVGYYSVKENKGHQIL---YVMDADG----------KNIRQLTTD 96

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-- 227
             +            ++ +    L  M+ DG   R LT  +  I    +FSP+ + V   
Sbjct: 97  AKNETDAAWIEGGRRIAFLRDGQLWAMNADGTGRRQLTNDKTDIEGF-KFSPDGRHVLLI 155

Query: 228 ----------------------------YATYDDE-----DILRVYLMDTRIDRAPKRI- 253
                                       Y  +D             + D ++D     + 
Sbjct: 156 KSLPYHGTIKANPTDLPKATGRLVTDMNYRHWDHYVETIAHPFVAEVNDGKVDGGVDILE 215

Query: 254 GNFRSMILAP-------RFSSNGKRALISVQKDEA--------MDIYSVDLQSNATERL- 297
           G      LAP        +S + K    + +K E          DIY  ++ +  T  L 
Sbjct: 216 GQPYESPLAPFGGIEQFDWSKDSKCVAYTCRKKEGVQYAISTDADIYLYNIDTRETRNLC 275

Query: 298 ------------TNTL--------------FINISASYSPDSSQIVFES-----DREGKE 326
                       T T+                +++  +SPD   I ++S         + 
Sbjct: 276 KPADYREPAIDATKTMKTQAVNHQSGDMNVGYDVNPRFSPDGKYIAWQSMAHNGYESDRN 335

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +L V      ++K +++  +++  D  W+     + F         +     DG Q + L
Sbjct: 336 RLCVYDLRTGEKKYVAESFDSNVEDFCWAADSRTLYFLGIWHACVMVYQTNLDG-QVKQL 394

Query: 387 VEDSNL 392
            +    
Sbjct: 395 TDGWYD 400


>gi|170107598|ref|XP_001885009.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164640223|gb|EDR04490.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 888

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 84/229 (36%), Gaps = 16/229 (6%)

Query: 182 ESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             VVSG    ++ + D   G  +          +    FSP+ ++V   + D      + 
Sbjct: 599 RRVVSGSDDETIRIWDAETGKLVGEPFQGHTYYITSVAFSPDGRRVLSGSCDK----TIR 654

Query: 241 LMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           + D    +   + +     MI +  FS +G+  ++S   D+ + I+ +DL     E L  
Sbjct: 655 VWDAETGKPVGESLQGHTDMITSVAFSPDGRH-VVSGSCDKTIRIWDLDLGEPVGEPLRG 713

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              +  S ++SPD  ++V  SD    E +++                   F   +SP G 
Sbjct: 714 HTNMVNSVAFSPDGGRVVSGSD---DETIWIWDVRTRMPVGEPFRGHNIVFSVAFSPDGR 770

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLI 405
            +           I +      +    V     + +++  +SP GR ++
Sbjct: 771 HVLSGSLDKT---IRIWDAATGKPVGDVFQGHTNGVRSVAFSPDGRHVV 816



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 97/302 (32%), Gaps = 50/302 (16%)

Query: 113 TGRVIKEGKDRLRVE------FRLWDVKDRKQII----GKKFFSSP----ASWRKIAHTI 158
           T  V      R  V        R+WD +  K +     G  ++ +        R++    
Sbjct: 589 TTSVTFSPDGRRVVSGSDDETIRIWDAETGKLVGEPFQGHTYYITSVAFSPDGRRVLSGS 648

Query: 159 SDDIYQSITGEKG-----------DFNSRILFVS--ESVVSGIIKNSLCVMDRD-GANIR 204
            D   +    E G           D  + + F      VVSG    ++ + D D G  + 
Sbjct: 649 CDKTIRVWDAETGKPVGESLQGHTDMITSVAFSPDGRHVVSGSCDKTIRIWDLDLGEPVG 708

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                   ++    FSP+  +V   + D+     +++ D R            +++ +  
Sbjct: 709 EPLRGHTNMVNSVAFSPDGGRVVSGSDDE----TIWIWDVRTRMPVGEPFRGHNIVFSVA 764

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNAT-----ERLTNTLFINISASYSPDSSQIVFE 319
           FS +G+  L S   D+ + I+  D  +        +  TN +    S ++SPD   +V  
Sbjct: 765 FSPDGRHVL-SGSLDKTIRIW--DAATGKPVGDVFQGHTNGV---RSVAFSPDGRHVVSG 818

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           SD    E + +  +          +           SP G  +           I +   
Sbjct: 819 SD---DETIRIWDAETGKPVGEPFEGHTGLITSVAISPDGRRVLSGSVDKT---IRIWDA 872

Query: 379 DG 380
           + 
Sbjct: 873 ET 874



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 64/187 (34%), Gaps = 20/187 (10%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFI 303
            D +   +    +   +  FS +G+R ++S   DE + I+  D ++     E      + 
Sbjct: 575 TDPSIFVLSGHTNSTTSVTFSPDGRR-VVSGSDDETIRIW--DAETGKLVGEPFQGHTYY 631

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIA 362
             S ++SPD  +++  S     + + V  +        S            +SP G  + 
Sbjct: 632 ITSVAFSPDGRRVLSGSC---DKTIRVWDAETGKPVGESLQGHTDMITSVAFSPDGRHVV 688

Query: 363 FTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                     I +   D  +     L    + + +  +SP G  ++      G     ++
Sbjct: 689 SGSCDKT---IRIWDLDLGEPVGEPLRGHTNMVNSVAFSPDGGRVV-----SGSDDETIW 740

Query: 420 SIDLNGR 426
             D+  R
Sbjct: 741 IWDVRTR 747


>gi|281410792|gb|ADA68809.1| HET-R [Podospora anserina]
          Length = 462

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 97/310 (31%), Gaps = 33/310 (10%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGK--------KFFSSPASWRKIAHTISDDI------ 162
            +     +    ++WD    + +               SP   R  +  + D +      
Sbjct: 144 QRLASGAVDRTVKIWDPASGQCLQTLEGHTGSVSSVAFSPDGQRFASGVVDDTVKIWDPA 203

Query: 163 ----YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                Q++ G +G  +S       +   SG    ++ + D                ++  
Sbjct: 204 SGQCLQTLEGHRGSVSSVAFSPDGQRFASGAGDRTIKIWDPASGQCLQTLEGHRGWVYSV 263

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + Q+ A    DD     V + D    +  + + +    + +  FS +G+R   S  
Sbjct: 264 AFSADGQRFASGAGDD----TVKIWDPASGQCLQTLESHNGSVSSVAFSPDGQRLA-SGA 318

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + I+         + L     +  S ++S D  ++       G + + +       
Sbjct: 319 DDDTVKIWD-PASGQCLQTLEGHKGLVYSVTFSADGQRLA---SGAGDDTVKIWDPASGQ 374

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAP 395
             +  +    S     +SP G   A +    +   I        Q    +E    ++ + 
Sbjct: 375 CLQTLEGHRGSVHSVAFSPDGQRFA-SGVVDDTVKIW--DPASGQCLQTLEGHNGSVSSV 431

Query: 396 TWSPSGRSLI 405
            +S  G+ L 
Sbjct: 432 AFSADGQRLA 441



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 83/242 (34%), Gaps = 19/242 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG    ++ + D             +  ++   FSP+ Q++A    DD     V +
Sbjct: 18  QRLASGAGDRTVKIWDPASGQCFQTLEGHNGSVYSVAFSPDGQRLASGAVDD----TVKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +  + +      + +  FS++G+R   S   D+ + I+         + L    
Sbjct: 74  WDPASGQCLQTLEGHNGSVYSVAFSADGQRLA-SGAGDDTVKIWD-PASGQCLQTLEGHR 131

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               S ++S D  ++   + DR     + +         +  +    S     +SP G  
Sbjct: 132 GSVSSVAFSADGQRLASGAVDRT----VKIWDPASGQCLQTLEGHTGSVSSVAFSPDGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            A +    +   I        Q    +E    ++ +  +SP G+         GD   K+
Sbjct: 188 FA-SGVVDDTVKIW--DPASGQCLQTLEGHRGSVSSVAFSPDGQRFA---SGAGDRTIKI 241

Query: 419 YS 420
           + 
Sbjct: 242 WD 243



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 65/201 (32%), Gaps = 14/201 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  ++   FS + Q++A    D      V + D    +  + +      + +  FS
Sbjct: 1   LEGHNGSVYSVAFSADGQRLASGAGDR----TVKIWDPASGQCFQTLEGHNGSVYSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+R   S   D+ + I+         + L        S ++S D  ++       G +
Sbjct: 57  PDGQRLA-SGAVDDTVKIWD-PASGQCLQTLEGHNGSVYSVAFSADGQRLA---SGAGDD 111

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +         +  +    S     +S  G  +A +        I        Q    
Sbjct: 112 TVKIWDPASGQCLQTLEGHRGSVSSVAFSADGQRLA-SGAVDRTVKIW--DPASGQCLQT 168

Query: 387 VE--DSNLQAPTWSPSGRSLI 405
           +E    ++ +  +SP G+   
Sbjct: 169 LEGHTGSVSSVAFSPDGQRFA 189


>gi|83945234|ref|ZP_00957583.1| putative exported tricorn protease [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851404|gb|EAP89260.1| putative exported tricorn protease [Oceanicaulis alexandrii
           HTCC2633]
          Length = 1093

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 74/212 (34%), Gaps = 31/212 (14%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R P R+ +  +   +P  S +G     +   +   D+Y + +     +RLT     +  
Sbjct: 55  GRDPVRLTSHAADERSPHISPDGTMVAFTADYENNQDVYVMPITGGQPQRLTWHPGNDQV 114

Query: 307 ASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             +SPD  +++F S R       +QL+ +       +   ++ +A +     S  G  +A
Sbjct: 115 TGWSPDG-RVLFASHREVNHGRSDQLWSIAPGEGYPR---KEMDARFVIGDMSADGR-LA 169

Query: 363 F------------------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRS 403
           +                      G    I ++  D     LL  D   +  P W   G  
Sbjct: 170 YHPTRLAHSFFTDGGSGWRIHRGGSTGTIRILSADRESSTLLESDRINEFYPIWV--GDL 227

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           + +    DG+    LYS D      T ++  A
Sbjct: 228 VYYLSDVDGEQ-LALYSYDPETGERTRLHDEA 258



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 58/315 (18%), Positives = 110/315 (34%), Gaps = 79/315 (25%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           SD I +      GD    +  V            L +   D       T   D+  ++ R
Sbjct: 213 SDRINEFYPIWVGDLVYYLSDVDGE--------QLALYSYDPETGER-TRLHDEAPWDIR 263

Query: 219 FS-PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------------ 265
           +   + Q + +   +    L+ Y + T      +   N     LAPR+            
Sbjct: 264 WMDSDGQTLVF---EAGGRLKRYDVATGQVSEIRVSLNADLPQLAPRWENAASTIQSAAL 320

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDREG 324
           S  G+RALI+ +     +++SV L   +T  +++T  +   +A +SPD +++ + +D  G
Sbjct: 321 SPTGQRALITARG----EVFSVPLDEGSTRNVSSTSGVREYTAIWSPDGNRVAYITDAGG 376

Query: 325 KEQL---------------------------------------------YVMQSNGSDQK 339
            +QL                                             YV+        
Sbjct: 377 AQQLTVVDQRGFESPRTLSLGGAEDSFYFLQSWTPETNRIVYTDHLLNLYVLNLETGRST 436

Query: 340 RISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPT 396
           R++ +   S F+   SP G  +A+T + +     + +   +    R+ V D   ++ AP 
Sbjct: 437 RVATEVRRSGFETAVSPDGRWLAYTLEQANFLRDLMLYNLEDG-TRITVSDGMADVGAPA 495

Query: 397 WSPSGRSLIFSRKKD 411
           +S  G  L F+   +
Sbjct: 496 FSRDGAYLYFAASTN 510



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 93/271 (34%), Gaps = 29/271 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L     DG +   LT S       P  SP+   VA+   D E+   VY+M       P+
Sbjct: 47  DLWRSGLDGRDPVRLT-SHAADERSPHISPDGTMVAFTA-DYENNQDVYVMPI-TGGQPQ 103

Query: 252 RIGNFRSMILAPRFSSNGKRALIS---VQKDEAMDIYSVDLQSNATER------LTNTLF 302
           R+           +S +G+    S   V    +  ++S+        +      +   + 
Sbjct: 104 RLTWHPGNDQVTGWSPDGRVLFASHREVNHGRSDQLWSIAPGEGYPRKEMDARFVIGDMS 163

Query: 303 INISASYSPDSSQIVFESD--------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +   +Y P      F +D        R G      + S   +   + +    + F P+W
Sbjct: 164 ADGRLAYHPTRLAHSFFTDGGSGWRIHRGGSTGTIRILSADRESSTLLESDRINEFYPIW 223

Query: 355 SPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
              GDL+ +     GE+ A+     +  +   L +++          G++L+F    +  
Sbjct: 224 V--GDLVYYLSDVDGEQLALYSYDPETGERTRLHDEAPWDIRWMDSDGQTLVF----EAG 277

Query: 414 TGSKLYSIDLNGRNETLINTPAYASD--PQW 442
              K Y +     +E  ++  A      P+W
Sbjct: 278 GRLKRYDVATGQVSEIRVSLNADLPQLAPRW 308



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 100/295 (33%), Gaps = 54/295 (18%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +  G    ++ ++  D      L  S     F P +      V Y +  D + L +Y  
Sbjct: 188 RIHRGGSTGTIRILSAD-RESSTLLESDRINEFYPIWV--GDLVYYLSDVDGEQLALYSY 244

Query: 243 DTRIDRAPKRIGNFRSMILAP---RFS-SNGKRALISVQKDEAMDIYSVDLQSNATE--- 295
           D       +          AP   R+  S+G+  +   +    +  Y  D+ +       
Sbjct: 245 DPETGERTRL------HDEAPWDIRWMDSDGQTLVF--EAGGRLKRY--DVATGQVSEIR 294

Query: 296 ------------RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                       R  N      SA+ SP   + +  +    + +++ +  +    + +S 
Sbjct: 295 VSLNADLPQLAPRWENAASTIQSAALSPTGQRALITA----RGEVFSVPLDEGSTRNVSS 350

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAP----TWS 398
                 +  +WSP G+ +A+   +G    + V+ + G    R L       +     +W+
Sbjct: 351 TSGVREYTAIWSPDGNRVAYITDAGGAQQLTVVDQRGFESPRTLSLGGAEDSFYFLQSWT 410

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--------AYASDPQWVGF 445
           P    ++++     D    LY ++L     T + T         A + D +W+ +
Sbjct: 411 PETNRIVYT-----DHLLNLYVLNLETGRSTRVATEVRRSGFETAVSPDGRWLAY 460



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 71/181 (39%), Gaps = 12/181 (6%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA-NIRYLTPSR--DQILFEPRF 219
            +  T       +R+ +++++  +      L V+D+ G  + R L+     D   F   +
Sbjct: 354 VREYTAIWSPDGNRVAYITDAGGA----QQLTVVDQRGFESPRTLSLGGAEDSFYFLQSW 409

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-QK 278
           +P   ++ Y  +    +L +Y+++    R+ +     R        S +G+    ++ Q 
Sbjct: 410 TPETNRIVYTDH----LLNLYVLNLETGRSTRVATEVRRSGFETAVSPDGRWLAYTLEQA 465

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   D+   +L+      +++ +    + ++S D + + F +      Q   +     ++
Sbjct: 466 NFLRDLMLYNLEDGTRITVSDGMADVGAPAFSRDGAYLYFAASTNVGPQQVGLNMQTRER 525

Query: 339 K 339
            
Sbjct: 526 P 526


>gi|116626431|ref|YP_828587.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229593|gb|ABJ88302.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 848

 Score = 88.2 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 70/215 (32%), Gaps = 10/215 (4%)

Query: 234 EDILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           +           +DRA K+I              S +GKR           D++  DL+ 
Sbjct: 555 KPSTSAQTHLVWVDRAGKQISEAAPPGSYGFVDLSRDGKRVAFDDMASSQFDVWLRDLER 614

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV-MQSNGSDQKRISQDKEASYF 350
               RLT          +SPD   +VF S   G +        +  +   +  +     F
Sbjct: 615 GIASRLTFKASNV--PLWSPDGGTVVFASAGNGLDLSQRPSNMSAPEAVLLKLNAPPFLF 672

Query: 351 DPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFS 407
              WS  G  +A+ +   +      V+   G ++ L  L  D N     +SP G+ + F 
Sbjct: 673 PSDWSSDGRYLAYFRTDPKTLLDQWVLPMFGDRQPLAFLHGDFNESQGQFSPDGQWMAFV 732

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             + G     + S         +       S P+W
Sbjct: 733 SDESGAPQINVVSFPTPAGIRQVSTAGG--SQPRW 765



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 58/348 (16%), Positives = 114/348 (32%), Gaps = 32/348 (9%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE-FRLWDVKDRKQ 138
             + + S   + + P  +   ++ ++L AQ    GR+   G      E    +DV   + 
Sbjct: 493 KPVIRASSSAQYSAPGYLLFLRE-STLMAQSFDLGRLSTSGDPSAIAERISEFDVSGNRT 551

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS------GIIKNS 192
           ++ K   S+      +     D   + I+      +   + +S              +  
Sbjct: 552 LVLKPSTSAQTHLVWV-----DRAGKQISEAAPPGSYGFVDLSRDGKRVAFDDMASSQFD 606

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D +      LT     +   P +SP+   V +A+  +   L     +     A   
Sbjct: 607 VWLRDLERGIASRLTFKASNV---PLWSPDGGTVVFASAGNGLDLSQRPSNMSAPEAVLL 663

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEA-MDIYSVDLQS-NATERLTNTLFINISASYS 310
             N    +    +SS+G+         +  +D + + +          +  F      +S
Sbjct: 664 KLNAPPFLFPSDWSSDGRYLAYFRTDPKTLLDQWVLPMFGDRQPLAFLHGDFNESQGQFS 723

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   + F SD  G  Q+ V+         I Q   A    P W   G  + +     + 
Sbjct: 724 PDGQWMAFVSDESGAPQINVVSFPT--PAGIRQVSTAGGSQPRWRRDGKELFYIALDHKL 781

Query: 371 FAIGVMKKDGSQ----------ERLLVEDSNLQAPTWSPSGRSLIFSR 408
            A+ V  K G+           E +L      QA + SP G+  + + 
Sbjct: 782 MAVSV--KTGAAFEAETPHPLFETILPTTPLRQAYSVSPDGQRFLLTS 827



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 72/209 (34%), Gaps = 26/209 (12%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINIS- 306
            P++   F   + +   S +G++ + +      +  ++   L S     LT         
Sbjct: 320 PPEKANFFSPEVKSQAISPDGRQLVFTAAISGQSPSLWLRPLDS-----LTAHPLAGTED 374

Query: 307 ---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                +SPDS  I F +      +L  + + G   + ++           WSP G +I F
Sbjct: 375 ALQPFWSPDSRSIGFFA----HGKLQKVDAAGGPAQPLADAP--LPLGGTWSPSG-VIVF 427

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               G   A+  +   G +   +         + P++ P GR  +F           +  
Sbjct: 428 APRIG---ALHRVPAGGGEAVPITHPELGMEHRFPSFLPDGRHFLFENFSPRHEKPDIGV 484

Query: 421 IDLNG---RNETLINTPAYASDPQWVGFM 446
             L+    +     ++ A  S P ++ F+
Sbjct: 485 GSLDSQDIKPVIRASSSAQYSAPGYLLFL 513



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 85/298 (28%), Gaps = 58/298 (19%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFR 257
           G  +    P        P F P+ +   +  +          + +   +  K +   +  
Sbjct: 442 GEAVPITHPELGMEHRFPSFLPDGRHFLFENFSPRHEKPDIGVGSLDSQDIKPVIRASSS 501

Query: 258 SMILAPRF------------SSN-GKRALISVQKDEAM---DIYSVDLQSNATERLTNTL 301
           +   AP +            S + G+   +S   D +     I   D+  N T  L  + 
Sbjct: 502 AQYSAPGYLLFLRESTLMAQSFDLGR---LSTSGDPSAIAERISEFDVSGNRTLVLKPST 558

Query: 302 FINISASY----------------------SPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                  +                      S D  ++ F+     +  +++         
Sbjct: 559 SAQTHLVWVDRAGKQISEAAPPGSYGFVDLSRDGKRVAFDDMASSQFDVWLRDLERGIAS 618

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAIGVMKKDGSQERLLVEDSNLQAPT 396
           R++     +   P+WSP G  + F               M    +    L     L    
Sbjct: 619 RLTFK---ASNVPLWSPDGGTVVFASAGNGLDLSQRPSNMSAPEAVLLKLNAPPFLFPSD 675

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA--------YASDPQWVGFM 446
           WS  GR L + R  D  T    + + + G  + L             ++ D QW+ F+
Sbjct: 676 WSSDGRYLAYFRT-DPKTLLDQWVLPMFGDRQPLAFLHGDFNESQGQFSPDGQWMAFV 732



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 60/170 (35%), Gaps = 14/170 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++ +          ++L       A    G   ++   P +S + +       
Sbjct: 335 AISPDGRQLVFTAAISGQSPSLWLRPLDSLTAHPLAGTEDALQ--PFWSPDSRSIGFFA- 391

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 +  VD      + L +   + +  ++SP    IVF   R G   L+ + + G +
Sbjct: 392 ---HGKLQKVDAAGGPAQPLADAP-LPLGGTWSPSG-VIVFA-PRIGA--LHRVPAGGGE 443

Query: 338 QKRISQDKEA-SYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQER 384
              I+  +    +  P + P G    F  FS   EK  IGV   D    +
Sbjct: 444 AVPITHPELGMEHRFPSFLPDGRHFLFENFSPRHEKPDIGVGSLDSQDIK 493



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 80/294 (27%), Gaps = 57/294 (19%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           SL +   D      L  + D    +P +SP+ + + +  +         L        P 
Sbjct: 355 SLWLRPLDSLTAHPLAGTED--ALQPFWSPDSRSIGFFAHGK-------LQKVDAAGGPA 405

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--FINISASY 309
           +      + L   +S +G    + V       ++ V         +T+      +   S+
Sbjct: 406 QPLADAPLPLGGTWSPSG----VIVFAPRIGALHRVPAGGGEAVPITHPELGMEHRFPSF 461

Query: 310 SPDSSQIVFE--SDREGKEQLYVMQSNGSDQK---------------------------- 339
            PD    +FE  S R  K  + V   +  D K                            
Sbjct: 462 LPDGRHFLFENFSPRHEKPDIGVGSLDSQDIKPVIRASSSAQYSAPGYLLFLRESTLMAQ 521

Query: 340 -----RISQDKEASYFDPVWS----PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                R+S   + S      S         +     +  +  +  + + G Q        
Sbjct: 522 SFDLGRLSTSGDPSAIAERISEFDVSGNRTLVLKPSTSAQTHLVWVDRAGKQISEAAPPG 581

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +      S  G+ + F       +   ++  DL     + +   A    P W  
Sbjct: 582 SYGFVDLSRDGKRVAF--DDMASSQFDVWLRDLERGIASRLTFKASNV-PLWSP 632



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 18/113 (15%)

Query: 341 ISQDKEASYFDP-----VWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           +   ++A++F P       SP G  + FT   SG+  ++ +   D      L    +   
Sbjct: 318 VLPPEKANFFSPEVKSQAISPDGRQLVFTAAISGQSPSLWLRPLDSLTAHPLAGTEDALQ 377

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP---QWVG 444
           P WSP  RS+ F          KL  +D  G     +   A A  P    W  
Sbjct: 378 PFWSPDSRSIGFFAH------GKLQKVDAAGGPAQPL---ADAPLPLGGTWSP 421


>gi|239616873|ref|YP_002940195.1| WD-40 repeat protein [Kosmotoga olearia TBF 19.5.1]
 gi|239505704|gb|ACR79191.1| WD-40 repeat protein [Kosmotoga olearia TBF 19.5.1]
          Length = 499

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 89/239 (37%), Gaps = 22/239 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG     + + +  G N   +       +     SP+ + +   ++D+     + L +T
Sbjct: 135 VSGSENGKIRIWNLKG-NCLRILSGHSGSVLSLAVSPDGKYIVSGSWDN----AIKLWNT 189

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +        + +   S +GK  + S  +D  + ++  DL+ N    L++     
Sbjct: 190 N-GECLRTFEGHIDWVRSVAISPDGKYIV-SGSEDGKIRLW--DLKGNCFGILSDHSGPV 245

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAF 363
           +S + SP+   IV  S       + +   NG   K  +      +   V  SP G  I  
Sbjct: 246 MSVAISPNGKYIVSGS---WDNTIKLWNVNGECLK--TFKGHTDWVRSVTISPDGRYIVS 300

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +G    + +   +G+  ++L      + +   SP  R ++   +   D   KL+S+
Sbjct: 301 GSENG---KVRIWDTEGNCLKILNGHSGPILSVAISPDKRYIVTGSR---DKTLKLWSL 353



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 78/218 (35%), Gaps = 21/218 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +     SP+ + +   ++D+     + L +       +        +     S
Sbjct: 74  LQGHSGPVSSVAISPDGKYIVSGSWDN----TIKLWNIN-GECLRTFEGHTDWVRTVAIS 128

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK  + S  ++  + I+  +L+ N    L+      +S + SPD   IV  S      
Sbjct: 129 PDGKYIV-SGSENGKIRIW--NLKGNCLRILSGHSGSVLSLAVSPDGKYIVSGS---WDN 182

Query: 327 QLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            + +  +NG   +  + +    +      SP G  I      G    I +    G+   +
Sbjct: 183 AIKLWNTNGECLR--TFEGHIDWVRSVAISPDGKYIVSGSEDG---KIRLWDLKGNCFGI 237

Query: 386 LVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           L +    + +   SP+G+ ++       D   KL++++
Sbjct: 238 LSDHSGPVMSVAISPNGKYIVSGSW---DNTIKLWNVN 272



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/275 (18%), Positives = 106/275 (38%), Gaps = 27/275 (9%)

Query: 163 YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           + S+ G  G  +S  +    + +VSG   N++ + + +G  +R      D +      SP
Sbjct: 71  FISLQGHSGPVSSVAISPDGKYIVSGSWDNTIKLWNINGECLRTFEGHTDWVRTV-AISP 129

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +   +  +   +R++ +        + +      +L+   S +GK  + S   D A
Sbjct: 130 DGKYI--VSGSENGKIRIWNLK---GNCLRILSGHSGSVLSLAVSPDGKYIV-SGSWDNA 183

Query: 282 MDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + ++     +N     T    I+   S + SPD   IV  S+ +GK +L+ ++    +  
Sbjct: 184 IKLW----NTNGECLRTFEGHIDWVRSVAISPDGKYIVSGSE-DGKIRLWDLK---GNCF 235

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWS 398
            I  D          SP G  I    +      I +   +G   +     ++  ++ T S
Sbjct: 236 GILSDHSGPVMSVAISPNGKYIVSGSWDNT---IKLWNVNGECLKTFKGHTDWVRSVTIS 292

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           P GR ++      G    K+   D  G    ++N 
Sbjct: 293 PDGRYIV-----SGSENGKVRIWDTEGNCLKILNG 322


>gi|20089376|ref|NP_615451.1| hypothetical protein MA0487 [Methanosarcina acetivorans C2A]
 gi|19914270|gb|AAM03931.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 429

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 94/268 (35%), Gaps = 24/268 (8%)

Query: 185 VSGIIKNSLCVMDRDGAN----IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S      +    RDG N    +  L+   +  +    F      V       ED    Y
Sbjct: 60  PSIYGDRVVWQDLRDGKNWDIYMYNLSTHEETRIMNDSFDHRGPVVYGDRIVWEDTSNGY 119

Query: 241 LM-DTRIDRAPKRIGNFRSMILAPRFSSN--GKRALI-----------SVQKDEAMDIYS 286
              D  +           +  ++ +++ +  G R +               +    DIY 
Sbjct: 120 QNADIHLYNLTTSTETQITTNMSGQYAPDIYGDRIVWEDTRNGGSWDKDGNRTGNWDIYL 179

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            DL ++   R+T    +    +   D  +IV++  R G   +Y+   + S + +I+ D  
Sbjct: 180 YDLSASTEYRITANESVQEYPAIYRD--RIVWQDFRNGNLDIYMYDLSTSRETQITTDPA 237

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           A Y   +    GD I +T     K  I +     S E  +    ++++ + +  G  +++
Sbjct: 238 AQYSPAI---HGDRIIWTDARNGKSDIYMYDISTSAESQITTSGSIESGS-AIYGNWIVW 293

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTP 434
              + G     +Y  DL+   ET I T 
Sbjct: 294 MDYRKGWENLDVYLYDLSTSTETQITTN 321



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 88/245 (35%), Gaps = 30/245 (12%)

Query: 201 ANIRYLTPSRDQILFEPRFSPN--QQKVAYATYDDEDILR----------VYLMDTRIDR 248
            N+   T ++       +++P+    ++ +    +               +YL D     
Sbjct: 127 YNLTTSTETQITTNMSGQYAPDIYGDRIVWEDTRNGGSWDKDGNRTGNWDIYLYDLSAST 186

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              RI    S+   P    +  R +    ++  +DIY  DL ++   ++T       S +
Sbjct: 187 EY-RITANESVQEYPAIYRD--RIVWQDFRNGNLDIYMYDLSTSRETQITTDPAAQYSPA 243

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                 +I++   R GK  +Y+   + S + +I+          ++   G+ I +  +  
Sbjct: 244 I--HGDRIIWTDARNGKSDIYMYDISTSAESQITTSGSIESGSAIY---GNWIVWMDYRK 298

Query: 369 E--KFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 + +     S E  +  + + Q      W      +++  +++G   + +Y   +
Sbjct: 299 GWENLDVYLYDLSTSTETQITTNESNQWGDLDIWR---NRIVWRDQRNG--NNDIYMCTV 353

Query: 424 NGRNE 428
           +G N+
Sbjct: 354 SGENK 358



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 89/268 (33%), Gaps = 71/268 (26%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTN 299
           L   R+     +I    S    P  S  G R +    +D    DIY  +L ++   R+ N
Sbjct: 38  LNSNRLTINETQITANSSDEACP--SIYGDRVVWQDLRDGKNWDIYMYNLSTHEETRIMN 95

Query: 300 TLFINISAS----------------------------------------YSPD--SSQIV 317
             F +                                            Y+PD    +IV
Sbjct: 96  DSFDHRGPVVYGDRIVWEDTSNGYQNADIHLYNLTTSTETQITTNMSGQYAPDIYGDRIV 155

Query: 318 FE-----------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +E            +R G   +Y+   + S + RI+ ++    +  ++    D I +  F
Sbjct: 156 WEDTRNGGSWDKDGNRTGNWDIYLYDLSASTEYRITANESVQEYPAIY---RDRIVWQDF 212

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGRSLIFSRKKDGDTGSKLYSIDLN 424
                 I +     S+E  +  D   Q   +SP   G  +I++  ++G   S +Y  D++
Sbjct: 213 RNGNLDIYMYDLSTSRETQITTDPAAQ---YSPAIHGDRIIWTDARNGK--SDIYMYDIS 267

Query: 425 GRNETLINTPAYASDPQ-----WVGFMD 447
              E+ I T             W+ +MD
Sbjct: 268 TSAESQITTSGSIESGSAIYGNWIVWMD 295


>gi|332139989|ref|YP_004425727.1| putative peptidase [Alteromonas macleodii str. 'Deep ecotype']
 gi|327550011|gb|AEA96729.1| putative peptidase [Alteromonas macleodii str. 'Deep ecotype']
          Length = 704

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 84/250 (33%), Gaps = 55/250 (22%)

Query: 222 NQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           +++ V Y+        D    R++ ++ +       I    ++  A   S NGK    + 
Sbjct: 68  DKETVVYSRQSMDIMTDSRQSRLWQVNIKTGEHRPFIALDENLSQA-TLSPNGKMVAYTK 126

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----------------- 319
             +    ++   L +  + RLTNT       ++S DS  + F                  
Sbjct: 127 SVNGRAQLHLYYLDTMQSVRLTNTSETPRQLTWSHDSEALAFTLFTEEKQKPLFSAMPSK 186

Query: 320 ------------------------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                                     REG +Q+YV+  +G   +++++    S     +S
Sbjct: 187 PKGAKWADNAKYIDSVQYRGDGRGYLREGFDQIYVLPVDGGTPRQLTKGHFPSGGTLSFS 246

Query: 356 PQGDLIAFTKFSGEKF-------AIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFS 407
              D I F     E +        I  +         + + +  ++ PT SP+G+ L F+
Sbjct: 247 KDNDWIYFASPQREDYALNPLFSDIYKVNVSSGVVEQVTDIAGPESRPTLSPNGKYLAFT 306

Query: 408 RKKDGDTGSK 417
           +  D     +
Sbjct: 307 QLNDRKLSYQ 316



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 12/173 (6%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-------D 283
           Y  E   ++Y++        +             FS +      +  + E         D
Sbjct: 211 YLREGFDQIYVLPVDGGTPRQLTKGHFPSGGTLSFSKDNDWIYFASPQREDYALNPLFSD 270

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQ---LYVMQSNGSDQ 338
           IY V++ S   E++T+        + SP+   + F   +DR+   Q   L V++    + 
Sbjct: 271 IYKVNVSSGVVEQVTDIAGPESRPTLSPNGKYLAFTQLNDRKLSYQNGDLLVLELESGEI 330

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            R++   + S    VW      + F+     +  +  +   G  ++L V    
Sbjct: 331 TRLTSSLDRSLGKFVWRKDSRGLMFSYLDHGETKLATVNLTGKVKKLEVTLGG 383



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 78/215 (36%), Gaps = 20/215 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------ILRVYLMDTR 245
            + V+  DG   R LT           FS +   + +A+   ED         +Y ++  
Sbjct: 218 QIYVLPVDGGTPRQLTKGHFPSGGTLSFSKDNDWIYFASPQREDYALNPLFSDIYKVNVS 277

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-----EAMDIYSVDLQSNATERLTNT 300
                +++ +       P  S NGK    +   D     +  D+  ++L+S    RLT++
Sbjct: 278 SG-VVEQVTDIAGPESRPTLSPNGKYLAFTQLNDRKLSYQNGDLLVLELESGEITRLTSS 336

Query: 301 LFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-- 357
           L  ++    +  DS  ++F     G+ +L  +   G  +K        ++  P  S    
Sbjct: 337 LDRSLGKFVWRKDSRGLMFSYLDHGETKLATVNLTGKVKKLEVTLGGQAFGRPYTSGDFA 396

Query: 358 ----GDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               GD++  T        + + +K G     L +
Sbjct: 397 LSEKGDIVFTTAARTMPGDLALYRK-GKSASKLTD 430


>gi|284166447|ref|YP_003404726.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haloterrigena turkmenica DSM 5511]
 gi|284016102|gb|ADB62053.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haloterrigena turkmenica DSM 5511]
          Length = 612

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 86/232 (37%), Gaps = 15/232 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F P+ +++++            L + R    P++   +   +    +S      +  + 
Sbjct: 19  SFGPDGERLSFLMNTTGTPQVWTLEEPRAW--PEQRTFYDERVTFASWSPERPELIFGMD 76

Query: 278 KDEA--MDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDR--EGKEQLYVMQ 332
           +       ++++D ++   E +T      +    +S D  +  F S+R  E    +YV  
Sbjct: 77  EGGNERAQLFTLDAETGEIENVTAMPEAKHRWGGWSHDGERFAFASNRRDESVFDIYVQD 136

Query: 333 SN-GSDQKRISQDKEASYFDPVWSPQGDLI----AFTKFSGEKFAIGVMKKDGSQERLLV 387
            +   D   +  + +       WSP    +    A++ F  + + + +   +   E L  
Sbjct: 137 RDETGDDADLVYEGDGWLSLSGWSPDDSRLLVSQAYSNFDQDLYVLDLEDDEPGLEHLTP 196

Query: 388 EDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAY 436
            + ++  Q+ +W+P G  +     +       L  +DL  +  ET+ +   +
Sbjct: 197 HEGDVRYQSASWAPDGEGIYLVTDEGDADTLYLAYLDLETKALETVADGDGW 248



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 73/193 (37%), Gaps = 13/193 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            F  +G+R    +       +++++      E+ T        AS+SP+  +++F  D  
Sbjct: 19  SFGPDGERLSFLMNTTGTPQVWTLEEPRAWPEQRTFYDERVTFASWSPERPELIFGMDEG 78

Query: 324 GKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKD 379
           G E  QL+ + +   + + ++   EA +    WS  G+  AF   +     F I V  +D
Sbjct: 79  GNERAQLFTLDAETGEIENVTAMPEAKHRWGGWSHDGERFAFASNRRDESVFDIYVQDRD 138

Query: 380 --GSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN---ETLINT 433
             G    L+ E     + + WSP    L+ S+    +    LY +DL       E L   
Sbjct: 139 ETGDDADLVYEGDGWLSLSGWSPDDSRLLVSQAYS-NFDQDLYVLDLEDDEPGLEHLTPH 197

Query: 434 PAYAS--DPQWVG 444
                     W  
Sbjct: 198 EGDVRYQSASWAP 210



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 92/269 (34%), Gaps = 24/269 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMD- 243
            G  +  L  +D +   I  +T   +       +S + ++ A+A+   DE +  +Y+ D 
Sbjct: 78  GGNERAQLFTLDAETGEIENVTAMPEAKHRWGGWSHDGERFAFASNRRDESVFDIYVQDR 137

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNAT--ERLTNT 300
                    +      +    +S +  R L+S    +   D+Y +DL+ +    E LT  
Sbjct: 138 DETGDDADLVYEGDGWLSLSGWSPDDSRLLVSQAYSNFDQDLYVLDLEDDEPGLEHLTPH 197

Query: 301 LFINI--SASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSP 356
                  SAS++PD   I   +D    + LY+  +       + ++     +        
Sbjct: 198 EGDVRYQSASWAPDGEGIYLVTDEGDADTLYLAYLDLETKALETVADGDGWNVGGIALDD 257

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----------TWSPSGRSLIF 406
           +     +++       + V K D S      E      P          ++ P       
Sbjct: 258 ETGRFVYSRNVEGYTDLTVGKFDESDP---TEFETFPEPDLPGGISGGVSFDPDAERFAL 314

Query: 407 SRKKDGDTGSKLYSIDL-NGRNETLINTP 434
           S        + ++ +D+ +G  E   + P
Sbjct: 315 STT-GDTVNTNVFVVDVESGETEQWTHAP 342


>gi|322436553|ref|YP_004218765.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321164280|gb|ADW69985.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 680

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 89/285 (31%), Gaps = 59/285 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALI 274
             SP+   +AY    +   + +           K +    S      +P +S + +    
Sbjct: 55  AISPDASTLAYTLRSEGSPIHLTSAVNPDPAKEKLVSPGSSTTCGNYSPVWSPDSQWLAY 114

Query: 275 SVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDRE 323
           +        K     I+     +  +++LT+   +    +++PD   + F      S   
Sbjct: 115 TSSCTTSQDKPGQDQIFLYSRATGESKQLTHLNGLFQEVAWAPDGKSLAFLFVQDASRSA 174

Query: 324 G-----KEQLYVMQSNGSDQKRIS----QDKEASYFDPV--------WSPQGDLIAFTKF 366
           G     K    V+  +G + +RI        + S+  P+        +SP    I +   
Sbjct: 175 GALAAMKPWAGVIGEDGVEVQRIYAVDVATGKGSFQSPLTLHVYEFGYSPSSKEITYIAA 234

Query: 367 S-GEKFAIGVMKK--------------------DGSQERLLVEDSNLQAPTWSPSGRSLI 405
               +    V +                     D +  +  +    +  P WSP G+ + 
Sbjct: 235 DAPGENNWWVAQLYAAPIKMGQNDVPAQPRGVFDPNTSKSALHGLQIAVPRWSPDGKHIA 294

Query: 406 F---SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP---QWVG 444
           F        G TG  ++ +D  G   T I TP     P    W G
Sbjct: 295 FIGGLMSDQGSTGGDVWVVDAKGGEATDI-TPNIDGTPTFLSWTG 338


>gi|75908062|ref|YP_322358.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75701787|gb|ABA21463.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 1661

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 104/294 (35%), Gaps = 41/294 (13%)

Query: 140  IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            + +  +      R   H  SD ++       G          + + SG    ++ +   D
Sbjct: 1021 LQQAVYGVTELNRLEGH--SDIVWGVAFSPDG----------QLLASGSTDRTIKLWRPD 1068

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID----RAPKRIGN 255
            G  ++ L      +     FSP+ Q +A  + D    +R++  +           + +  
Sbjct: 1069 GTLLQTLEGHTSAVTSV-SFSPDGQTIASTSLD--QTVRIWRKNPTTGEFAPEPAQSLRK 1125

Query: 256  FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             +  + +  FS +G+    +  +D  + I+  D   N  + L          S+SPDS  
Sbjct: 1126 HKDWVYSANFSPDGELLA-TASRDRTIKIW--DRDGNLIKTLKGHQGSVNWVSFSPDSQF 1182

Query: 316  IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            I   S+    + + + + +GS  K +S  +E       +SP G L+A          I +
Sbjct: 1183 IASASE---DKTVKIWRRDGSLVKTLSAHQEG-VTVVTFSPDGKLLASADRDN---VIQL 1235

Query: 376  MKKDGSQE---------RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             + D S            L    S + + ++S   + L  +     D    L+S
Sbjct: 1236 WQWDSSNHNNPEVDIYKTLKQHTSTVWSLSFSSDSKQLASASD---DNTINLWS 1286



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 55/290 (18%), Positives = 108/290 (37%), Gaps = 31/290 (10%)

Query: 161  DIYQSITGE-KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            DIY+++       ++      S+ + S    N++ +    G N+          +    F
Sbjct: 1249 DIYKTLKQHTSTVWSLSFSSDSKQLASASDDNTINLWSHTG-NLIKTFKGHSDAVVSVAF 1307

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+ + +A  +YD      V L      R P  +      +L+  +S +G+    S  +D
Sbjct: 1308 SPDTKILASGSYDK----SVKLWSLEAPRLP-ILRGHEDRVLSVAWSPDGQVLA-SSSRD 1361

Query: 280  EAMDIYSVDLQSNAT-----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
              + ++   L          + L     +  S S  P    +   S+    + + + + +
Sbjct: 1362 RTVKLWRRQLNKGRLDAHLYKTLVGHTQMVHSVSIDPKGEILASASE---DKTVKLWRLD 1418

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQ 393
            G+  K +S   ++        P G L+A          I +  +DGS  + LV  ++ + 
Sbjct: 1419 GTLLKTLSGHSDSVVSVSFS-PDGHLLASASRD---HTIKLWNRDGSLLKTLVGHEARVN 1474

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            + ++SP G  L  +     D   KL+  D +     LI T  +     WV
Sbjct: 1475 SVSFSPDGEVLASASD---DKTIKLWRPDGS-----LIKT--FDPHDSWV 1514



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 68/179 (37%), Gaps = 17/179 (9%)

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            R+     ++    FS +G+    S   D  + ++  D      + L        S S+SP
Sbjct: 1033 RLEGHSDIVWGVAFSPDGQLLA-SGSTDRTIKLWRPD--GTLLQTLEGHTSAVTSVSFSP 1089

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSD-----QKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            D   I   S  +   +++       +      + + + K+  Y    +SP G+L+A    
Sbjct: 1090 DGQTIASTSL-DQTVRIWRKNPTTGEFAPEPAQSLRKHKDWVYSAN-FSPDGELLATASR 1147

Query: 367  SGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  I +  +DG+  + L     ++   ++SP  + +  + +   D   K++  D +
Sbjct: 1148 DRT---IKIWDRDGNLIKTLKGHQGSVNWVSFSPDSQFIASASE---DKTVKIWRRDGS 1200



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/297 (14%), Positives = 113/297 (38%), Gaps = 28/297 (9%)

Query: 135  DRKQIIGKKFFSSPASWRKIAH--TISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKN 191
            D + +       +   WR+  +   +   +Y+++ G     +S  +     +  S     
Sbjct: 1351 DGQVLASSSRDRTVKLWRRQLNKGRLDAHLYKTLVGHTQMVHSVSIDPKGEILASASEDK 1410

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            ++ +   DG  ++ L+   D ++     SP+   +A A+ D      + L +        
Sbjct: 1411 TVKLWRLDGTLLKTLSGHSDSVVSVSF-SPDGHLLASASRDH----TIKLWNRDGSLLKT 1465

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             +G+   +  +  FS +G+    S   D+ + ++  D   +  +         +  S+SP
Sbjct: 1466 LVGHEARVN-SVSFSPDGEVLA-SASDDKTIKLWRPD--GSLIKTFDPHDSWVLGVSFSP 1521

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                +           + + + +G+  + + +    S     +SP G+++A   +     
Sbjct: 1522 TEKLLA---SAGWDNTVRLWRQDGTLLQTLLRGFSDSVNAVSFSPTGEILAAANWDS--- 1575

Query: 372  AIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                +K    + +L+   +  +AP    ++SP G++L  +     D    L+++ L+
Sbjct: 1576 ---TVKLWSREGKLIKTLNGHEAPVLSVSFSPDGQTLASASD---DNTIILWNLHLD 1626



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 88/222 (39%), Gaps = 16/222 (7%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAP-KRIGNFRSMILAP 263
            +    +  +    +SP+ Q +A ++ D    + R  L   R+D    K +     M+ + 
Sbjct: 1335 ILRGHEDRVLSVAWSPDGQVLASSSRDRTVKLWRRQLNKGRLDAHLYKTLVGHTQMVHSV 1394

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
                 G   L S  +D+ + ++ +D      + L+      +S S+SPD   +   S R+
Sbjct: 1395 SIDPKG-EILASASEDKTVKLWRLD--GTLLKTLSGHSDSVVSVSFSPDGHLLASAS-RD 1450

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                + +   +GS  K +    EA      +SP G+++A          I + + DGS  
Sbjct: 1451 HT--IKLWNRDGSLLKTLV-GHEARVNSVSFSPDGEVLASASDDKT---IKLWRPDGSLI 1504

Query: 384  RLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +     DS +   ++SP+ + L        D   +L+  D  
Sbjct: 1505 KTFDPHDSWVLGVSFSPTEKLLA---SAGWDNTVRLWRQDGT 1543


>gi|256380418|ref|YP_003104078.1| hypothetical protein Amir_6431 [Actinosynnema mirum DSM 43827]
 gi|255924721|gb|ACU40232.1| WD-40 repeat protein [Actinosynnema mirum DSM 43827]
          Length = 1766

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 85/242 (35%), Gaps = 19/242 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V     +  L V    G +   +  +R   +    +SP+ +++A A        +V L++
Sbjct: 1107 VAGTERRPELRVAAVSGRDRAEVMLARSGPVLAVAYSPDGERIALA-----HGRQVELLN 1161

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                 + + +G     + +  FS +G R + +  +D    +++ D   +    LT     
Sbjct: 1162 AAGHSSLRFVGEHGGKVTSVAFSPDGTRLV-TGGEDGTARVWTTD--GDHVLTLTGHERT 1218

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              + ++ PD  +I     R+G  + +    +  +  R+             +P G  +A 
Sbjct: 1219 VTAVAFFPDGRRIA-TGSRDGTTRTWT---SAGEPLRVLTSDSRPITALALAPDGRRLAT 1274

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +G      V    G     L    N   A  +SP G  +        D  ++ ++ D
Sbjct: 1275 GSSAGTA---HVWTAGGEHVAELAGHENWINAVAFSPDGARV---TTASSDRTARTWTTD 1328

Query: 423  LN 424
              
Sbjct: 1329 GT 1330



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 90/297 (30%), Gaps = 23/297 (7%)

Query: 133  VKDRKQIIGKKFFSSPASWRKIAHTISD----DIYQSITGEKGDFNSRILFVSESVVSGI 188
            V    +  G        + R+    ++     D  + +    G   +         ++  
Sbjct: 1093 VLTGSRWEGAALLGVAGTERRPELRVAAVSGRDRAEVMLARSGPVLAVAYSPDGERIALA 1152

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                + +++  G +           +    FSP+  ++   T  ++   RV+  D     
Sbjct: 1153 HGRQVELLNAAGHSSLRFVGEHGGKVTSVAFSPDGTRL--VTGGEDGTARVWTTD---GD 1207

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                +      + A  F  +G+R   +  +D     ++          LT+      + +
Sbjct: 1208 HVLTLTGHERTVTAVAFFPDGRRIA-TGSRDGTTRTWT--SAGEPLRVLTSDSRPITALA 1264

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             +PD  ++       G   ++     G +        E       +SP G  +       
Sbjct: 1265 LAPDGRRLA-TGSSAGTAHVWT---AGGEHVAELAGHENWINAVAFSPDGARVTTASSDR 1320

Query: 369  EKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                      DG+Q  +L +D   + A   SP G+ +        D    +++ D +
Sbjct: 1321 TA---RTWTTDGTQVAVLTDDVGPVTALAHSPDGKHVA---TGASDGTGHVWTADGS 1371



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 90/243 (37%), Gaps = 20/243 (8%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S  + +     +  V   DG++   L    +  +    FSPN + +A A  D        
Sbjct: 1474 SHRIATAGHDGTAHVWAGDGSSTATLV-GHEHRVNAVAFSPNGELIATAGSDQ----TAR 1528

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            L D+    A   +   R+ + +  FS +G   + +   D    I+SVD            
Sbjct: 1529 LWDSE-GSARAVLTGHRNWVTSVVFSPDG-ELVATASHDGTARIWSVD--GEPVTDFVKH 1584

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPDS  I      +G  +L+ ++       R             +SP G  
Sbjct: 1585 PRPVTSVAFSPDSGTIA-TGGNDGTARLWTVE---GGLLRSLPRHRGRVTAVAFSPNGAH 1640

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +A     G+   +G+   DG+   +L     ++    +SP G  L  +   DG T  +L+
Sbjct: 1641 VATAGSEGDAHVLGL---DGTVRAVLSGHSESVMTVAFSPRGNHLA-TGSVDGTT--RLW 1694

Query: 420  SID 422
            + D
Sbjct: 1695 TAD 1697



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 113/347 (32%), Gaps = 39/347 (11%)

Query: 80   NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLV----TGRVIKEGKDRLRVEFRLWDVKD 135
            N ++      ++T   S    + W + G QV V     G V                  D
Sbjct: 1302 NAVAFSPDGARVTTASSDRTARTWTTDGTQVAVLTDDVGPVTALAHS-----------PD 1350

Query: 136  RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
             K +       +   W      ++  +          ++     ++ +      +     
Sbjct: 1351 GKHVATGASDGTGHVWTADGSLVATLLGHQGVITSIAYSPDGAIITTAGSDKTAR----T 1406

Query: 196  MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
             + DG  +  +  +R + +    F+PN + +A A+ D     RV+   TR       +  
Sbjct: 1407 WNADGG-LVAIPTTRSRTVTSAAFAPNGRFLATASSD--GATRVW---TREGVLVTTVHG 1460

Query: 256  FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
              + + A  FS    R   +   D    +++ D  S AT  L        + ++SP+   
Sbjct: 1461 DGNRVNAVAFSPGSHRIA-TAGHDGTAHVWAGDGSSTAT--LVGHEHRVNAVAFSPNGEL 1517

Query: 316  IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            I       G +Q   +  +    + +           V+SP G+L+A     G      +
Sbjct: 1518 IA----TAGSDQTARLWDSEGSARAVLTGHRNWVTSVVFSPDGELVATASHDGTA---RI 1570

Query: 376  MKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               DG      +     + +  +SP   ++        D  ++L+++
Sbjct: 1571 WSVDGEPVTDFVKHPRPVTSVAFSPDSGTIA---TGGNDGTARLWTV 1614



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 65/190 (34%), Gaps = 17/190 (8%)

Query: 173  FNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            + + ++F  +   V +     +  +   DG  +         +     FSP+   +A  T
Sbjct: 1546 WVTSVVFSPDGELVATASHDGTARIWSVDGEPVTDFVKHPRPVTSV-AFSPDSGTIA--T 1602

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              ++   R++ ++       + +   R  + A  FS NG     +  +    D + + L 
Sbjct: 1603 GGNDGTARLWTVE---GGLLRSLPRHRGRVTAVAFSPNGAHVATAGSEG---DAHVLGLD 1656

Query: 291  SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                  L+      ++ ++SP  + +      +G  +L+            + D  A+ F
Sbjct: 1657 GTVRAVLSGHSESVMTVAFSPRGNHLA-TGSVDGTTRLWTADGALVATLIATDDGWATLF 1715

Query: 351  DPVWSPQGDL 360
                 P G  
Sbjct: 1716 -----PDGSY 1720


>gi|116180242|ref|XP_001219970.1| hypothetical protein CHGG_00749 [Chaetomium globosum CBS 148.51]
 gi|88185046|gb|EAQ92514.1| hypothetical protein CHGG_00749 [Chaetomium globosum CBS 148.51]
          Length = 346

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 87/261 (33%), Gaps = 15/261 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D                +F   +SP+  ++A  + D      + + +  
Sbjct: 53  SASADGTVKLWDPATHQCSATLEGHGGSVFSVVWSPDGTQLASGSADR----TIKIWNPA 108

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             +    + +    +L+  +S +G +   S  +D  ++I+  DL +      L       
Sbjct: 109 TGQCTATLESHAGSVLSVAWSPDGTQLA-SGSRDGPIEIW--DLATAQCVATLKGHDSAV 165

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S S+S +  ++V  S+    + +       +    I +          WSP G  IA  
Sbjct: 166 LSVSWSSNGWELVSGSE---DQTIRTWDMTNTWCTMILEAFRELVLSVAWSPDGYKIA-- 220

Query: 365 KFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               +   I +  +D  S   L     ++ +  WSP G  L             L+ +D 
Sbjct: 221 -SGPDDTIIKIWGEDYRSSLTLEGHTRSVGSVAWSPDGARLASGSDDRTVKVWDLWDLDH 279

Query: 424 NGRNETLINTPAYASDPQWVG 444
                TL+    +     W  
Sbjct: 280 GECTTTLLGHDKFVQSVAWSP 300



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 92/272 (33%), Gaps = 17/272 (6%)

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCV 195
            Q+       +   W    H  S     ++ G  G   S +     +   SG    ++ +
Sbjct: 49  GQLASASADGTVKLWDPATHQCS----ATLEGHGGSVFSVVWSPDGTQLASGSADRTIKI 104

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            +           S    +    +SP+  ++A  + D      + + D    +    +  
Sbjct: 105 WNPATGQCTATLESHAGSVLSVAWSPDGTQLASGSRDGP----IEIWDLATAQCVATLKG 160

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             S +L+  +SSNG   L+S  +D+ +  + +   +  T  L     + +S ++SPD  +
Sbjct: 161 HDSAVLSVSWSSNG-WELVSGSEDQTIRTWDM-TNTWCTMILEAFRELVLSVAWSPDGYK 218

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           I         + +  +           +    S     WSP G  +A            +
Sbjct: 219 IA----SGPDDTIIKIWGEDYRSSLTLEGHTRSVGSVAWSPDGARLASGSDDRTVKVWDL 274

Query: 376 MKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLI 405
              D  +    LL  D  +Q+  WSP+G  L 
Sbjct: 275 WDLDHGECTTTLLGHDKFVQSVAWSPNGARLA 306



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 72/175 (41%), Gaps = 13/175 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    ++   D        +  +  +++    +SP+  K+A  +  D+ I++++  D 
Sbjct: 178 VSGSEDQTIRTWDMTNTWCTMILEAFRELVLSVAWSPDGYKIA--SGPDDTIIKIWGEDY 235

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNA--TERLTNTL 301
           R       +      + +  +S +G R   S   D  + ++ + DL      T  L +  
Sbjct: 236 RSSLT---LEGHTRSVGSVAWSPDGARLA-SGSDDRTVKVWDLWDLDHGECTTTLLGHDK 291

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           F+  S ++SP+ +++   SD    E + +     S+     +  E + +   WSP
Sbjct: 292 FVQ-SVAWSPNGARLASGSD---DETVKIWDPVTSECVATLEGHEDTVYSVAWSP 342



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 45/131 (34%), Gaps = 6/131 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY- 240
             + SG     + +   D            + +    +SP+  ++A  + D    ++V+ 
Sbjct: 217 YKIASGPDDTIIKIWGED-YRSSLTLEGHTRSVGSVAWSPDGARLASGSDD--RTVKVWD 273

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L D         +      + +  +S NG R   S   DE + I+   + S     L   
Sbjct: 274 LWDLDHGECTTTLLGHDKFVQSVAWSPNGARLA-SGSDDETVKIWD-PVTSECVATLEGH 331

Query: 301 LFINISASYSP 311
                S ++SP
Sbjct: 332 EDTVYSVAWSP 342


>gi|239617551|ref|YP_002940873.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kosmotoga olearia TBF 19.5.1]
 gi|239506382|gb|ACR79869.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kosmotoga olearia TBF 19.5.1]
          Length = 605

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 10/185 (5%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           I+    SS+G++ L S  +    + + +DL++    +LT++        Y P+ +  +FE
Sbjct: 19  IIGTALSSDGRKILFSSDESGIFNAHEIDLETGKASKLTDSQDSVFIVGYLPEGNGFLFE 78

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGV 375
            D  G E   +Y+  ++G ++K ++ D++A      WS  G    F       + F I  
Sbjct: 79  KDNGGNEISHIYLKDADG-NEKDLTPDEKAKAMFHSWSDDGKGFYFLSNKRDPKYFDIYY 137

Query: 376 MKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
           M     +  L++E+       P  SP+GR +  S+        ++Y  DL  G    +  
Sbjct: 138 MDIKSLEADLILENNEGFNPGPV-SPNGRFIALSKTVT-MNDVEMYIKDLKTGELTHITP 195

Query: 433 TPAYA 437
                
Sbjct: 196 HEGEV 200



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 89/270 (32%), Gaps = 10/270 (3%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDIL 237
           F+ E    G   + + + D DG N + LTP          +S + +   + +   D    
Sbjct: 75  FLFEKDNGGNEISHIYLKDADG-NEKDLTPDEKAKAMFHSWSDDGKGFYFLSNKRDPKYF 133

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATER 296
            +Y MD +   A   + N       P  S NG+   +S        ++Y  DL++     
Sbjct: 134 DIYYMDIKSLEADLILENNEGFNPGP-VSPNGRFIALSKTVTMNDVEMYIKDLKTGELTH 192

Query: 297 LTNTLFIN-ISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +T           S+S DS  + F +D + + +     +  S      +          +
Sbjct: 193 ITPHEGEVFYDPVSFSRDSKILYFITDEDREFKYLKKYNLSSGTSEPFKVFAWDVVFAKF 252

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDG 412
           S     +A    +  +  + +       E  L E     +    +S   R L        
Sbjct: 253 SKNNRFLALAINNDARIELKIYDLKKDIEIDLPELPKGVVSDFDFSRDERFLALVADASN 312

Query: 413 DTGSKLYSIDL-NGRNETLINTPAYASDPQ 441
                L+ +D   G  + L ++     DP+
Sbjct: 313 SP-RNLFLLDFQTGEIKKLTDSLNPEIDPE 341



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 6/135 (4%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S D  +I+F SD  G    + +        +++ D + S F   + P+G+   F K +G 
Sbjct: 25  SSDGRKILFSSDESGIFNAHEIDLETGKASKLT-DSQDSVFIVGYLPEGNGFLFEKDNGG 83

Query: 370 K--FAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                I +   DG  E+ L  D   +A   +WS  G+   F   K       +Y +D+  
Sbjct: 84  NEISHIYLKDADG-NEKDLTPDEKAKAMFHSWSDDGKGFYFLSNKRDPKYFDIYYMDIKS 142

Query: 426 RNETLINTPAYASDP 440
               LI       +P
Sbjct: 143 LEADLILENNEGFNP 157



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 70/211 (33%), Gaps = 8/211 (3%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P      +   +  + +    +            + ++  +   +S +GK       K +
Sbjct: 70  PEGNGFLFEKDNGGNEISHIYLKDADGNEKDLTPDEKAKAMFHSWSDDGKGFYFLSNKRD 129

Query: 281 --AMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGS 336
               DIY +D++S   +  L N    N     SP+   I         + ++Y+      
Sbjct: 130 PKYFDIYYMDIKSLEADLILENNEGFNPGPV-SPNGRFIALSKTVTMNDVEMYIKDLKTG 188

Query: 337 DQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKK-DGSQERLLVEDSNLQ 393
           +   I+  + E  Y    +S    ++ F      +F  +       G+ E   V   ++ 
Sbjct: 189 ELTHITPHEGEVFYDPVSFSRDSKILYFITDEDREFKYLKKYNLSSGTSEPFKVFAWDVV 248

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +S + R L  +   D     K+Y +  +
Sbjct: 249 FAKFSKNNRFLALAINNDARIELKIYDLKKD 279



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 33/103 (32%), Gaps = 2/103 (1%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSG 401
             K  +      S  G  I F+      F    +  +  +   L +  +      + P G
Sbjct: 13  FMKNITIIGTALSSDGRKILFSSDESGIFNAHEIDLETGKASKLTDSQDSVFIVGYLPEG 72

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWV 443
              +F +   G+  S +Y  D +G  + L     A A    W 
Sbjct: 73  NGFLFEKDNGGNEISHIYLKDADGNEKDLTPDEKAKAMFHSWS 115



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 70/176 (39%), Gaps = 4/176 (2%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAY 228
            G  +    F++ S    +    + + D     + ++TP   ++ ++P  FS + + + +
Sbjct: 157 PGPVSPNGRFIALSKTVTMNDVEMYIKDLKTGELTHITPHEGEVFYDPVSFSRDSKILYF 216

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            T +D +   +   +     +         ++ A +FS N +   +++  D  +++   D
Sbjct: 217 ITDEDREFKYLKKYNLSSGTSEPFKVFAWDVVFA-KFSKNNRFLALAINNDARIELKIYD 275

Query: 289 LQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRIS 342
           L+ +    L      +     +S D   +   +D     + L+++     + K+++
Sbjct: 276 LKKDIEIDLPELPKGVVSDFDFSRDERFLALVADASNSPRNLFLLDFQTGEIKKLT 331


>gi|170120012|ref|XP_001891084.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164633736|gb|EDQ98266.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 921

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 89/242 (36%), Gaps = 21/242 (8%)

Query: 173 FNSRILFVSESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           + + + F  +    VSG    ++ V D + G ++       D  +    FSP+ + +   
Sbjct: 501 WVTSVAFSPDGRHIVSGSHDKTVRVWDAQTGQSVMDPLKGHDSWVTSVAFSPDGRHIVSG 560

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +YD    +RV+   T         G   S + +  FS +G+  + S   D+ + ++  D 
Sbjct: 561 SYD--KTVRVWDAQTGQSVMDPLKG-HDSWVTSVAFSPDGRHIV-SGSYDKTVRVW--DA 614

Query: 290 QSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKE 346
           Q+  +    L        S ++SPD   IV  S     + + V  +          +  +
Sbjct: 615 QTGQSVMDPLKGHDHWVTSVAFSPDGRHIVSGSH---DKTVRVWDAQTGQSVMDPLKGHD 671

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRS 403
           +      +SP G  I    +      + V      Q     L   D  + +  +SP GR 
Sbjct: 672 SWVTSVAFSPDGRHIVSGSYDKT---VRVWDAQTGQSVMDPLKGHDDWVTSVAFSPDGRH 728

Query: 404 LI 405
           ++
Sbjct: 729 IV 730



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/312 (17%), Positives = 110/312 (35%), Gaps = 38/312 (12%)

Query: 121 KDRLRVEFRLWDVKDRKQII---------GKKFFSSPASWRKIA--HTISDDIYQSITGE 169
                   R+WD +  + ++               SP     ++  H  +  ++ + TG+
Sbjct: 602 SGSYDKTVRVWDAQTGQSVMDPLKGHDHWVTSVAFSPDGRHIVSGSHDKTVRVWDAQTGQ 661

Query: 170 K--------GDFNSRILFVSESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPR 218
                      + + + F  +    VSG    ++ V D + G ++       D  +    
Sbjct: 662 SVMDPLKGHDSWVTSVAFSPDGRHIVSGSYDKTVRVWDAQTGQSVMDPLKGHDDWVTSVA 721

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +   + D    +RV+   T         G+    + +  FS +G+    S   
Sbjct: 722 FSPDGRHIVSGSRD--KTVRVWDAQTGQSVMDPLNGHDH-WVTSVAFSPDGRHIA-SGSH 777

Query: 279 DEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D+ + ++  D Q+  +    L        S ++SPD   IV  S R+   +++  Q+  S
Sbjct: 778 DKTVRVW--DAQTGQSVMDPLNGHDHWVTSVAFSPDGRHIVSGS-RDKTVRVWDAQTGQS 834

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQ 393
               +    +       +SP    I    +      + V      Q     L   DS + 
Sbjct: 835 VMDPL-NGHDHWVTSVAFSPDVRHIVSGSYDKT---VRVWDAQTGQSVMDPLKGHDSWVT 890

Query: 394 APTWSPSGRSLI 405
           +  +SP GR ++
Sbjct: 891 SVAFSPDGRHIV 902



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 79/218 (36%), Gaps = 18/218 (8%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            ++   G ++       D  +    FSP+ + +   ++D    +RV+   T         
Sbjct: 396 FILFDGGQSVMDPLKGHDHWVTSVAFSPDGRHIVSGSHD--KTVRVWDAQTGQSVMDPLK 453

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSP 311
           G+    + +  FS +G+  + S   D+ + ++  D Q+  +    L        S ++SP
Sbjct: 454 GHDH-WVTSVAFSPDGRHIV-SGSHDKTVRVW--DAQTGQSVMDPLKGHDHWVTSVAFSP 509

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           D   IV  S     + + V  +          +  ++      +SP G  I    +    
Sbjct: 510 DGRHIVSGSH---DKTVRVWDAQTGQSVMDPLKGHDSWVTSVAFSPDGRHIVSGSYDKT- 565

Query: 371 FAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLI 405
             + V      Q     L   DS + +  +SP GR ++
Sbjct: 566 --VRVWDAQTGQSVMDPLKGHDSWVTSVAFSPDGRHIV 601



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 64/169 (37%), Gaps = 14/169 (8%)

Query: 173 FNSRILFVSESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           + + + F  +     SG    ++ V D + G ++       D  +    FSP+ + +   
Sbjct: 759 WVTSVAFSPDGRHIASGSHDKTVRVWDAQTGQSVMDPLNGHDHWVTSVAFSPDGRHIVSG 818

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D    +RV+   T         G+    + +  FS + +  + S   D+ + ++  D 
Sbjct: 819 SRD--KTVRVWDAQTGQSVMDPLNGHDH-WVTSVAFSPDVRHIV-SGSYDKTVRVW--DA 872

Query: 290 QSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           Q+  +    L        S ++SPD   IV  SD      + V  +  S
Sbjct: 873 QTGQSVMDPLKGHDSWVTSVAFSPDGRHIVSGSD---DPTVRVWDARDS 918



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 55/191 (28%), Gaps = 21/191 (10%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y   +    +     D        R     +  L P++     + L  V+K   + +++
Sbjct: 334 VYHNLNTGHEVSAQTHDDLEKYFVARFS--EANWLPPKW-PGPDKILFLVRKAAGLFVWA 390

Query: 287 VDL------QSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                        +    L        S ++SPD   IV  S     + + V  +     
Sbjct: 391 KSAMDFILFDGGQSVMDPLKGHDHWVTSVAFSPDGRHIVSGSH---DKTVRVWDAQTGQS 447

Query: 339 KR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQA 394
                +  +       +SP G  I           + V      Q     L   D  + +
Sbjct: 448 VMDPLKGHDHWVTSVAFSPDGRHIVSGSHDKT---VRVWDAQTGQSVMDPLKGHDHWVTS 504

Query: 395 PTWSPSGRSLI 405
             +SP GR ++
Sbjct: 505 VAFSPDGRHIV 515


>gi|114046720|ref|YP_737270.1| peptidase S41 [Shewanella sp. MR-7]
 gi|113888162|gb|ABI42213.1| peptidase S41 [Shewanella sp. MR-7]
          Length = 1093

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 113/307 (36%), Gaps = 36/307 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +Q    +   +  R+ F+S+S  +      L  M  DG++ + LT  +D  +   R   +
Sbjct: 215 HQGSVRQPMLWQDRLYFISDSDGNDN----LWSMALDGSDAKQLTQYKDWQVRGVRM--D 268

Query: 223 QQKVAY----------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           Q KV +               + +L + L      R    + +      +   +  G + 
Sbjct: 269 QGKVVFQQGADIHVFDIASAKDSLLDIELTSDFAQRREHWVKDPMDYATSANLALAGDKV 328

Query: 273 LISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           +I+ +      +    +  +   ++     +   +A  S D   +   SD  G+++++  
Sbjct: 329 VITAR----SHVAIAGIDGSRLVQVALPGTYRVRNAIMSQDGKSVYAISDMSGQQEIWQF 384

Query: 332 QSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            ++GS   K++++D          S  G  +A     G    + ++    +  + ++ + 
Sbjct: 385 PADGSSGAKQLTKDGHTLRMTLSLSNDGRYLAHDDNDG---NVWLLDLKKNSNQKIISNG 441

Query: 391 NLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASD 439
               P     WS   R +  ++ + G    ++    ++      +        +P ++SD
Sbjct: 442 EGLGPYADIRWSADSRFIALTKSEIGKQRPQIVLYSVDENKAQALTSDKYESYSPTFSSD 501

Query: 440 PQWVGFM 446
            QW+ F+
Sbjct: 502 GQWLYFL 508



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 80/221 (36%), Gaps = 28/221 (12%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L       A  +  + +    AP      +  + + + D    +++  L   A  RLT  
Sbjct: 14  LGTLSAAHAIAQPASNQGYYRAPALHD--QTLVFTAEGD----LWTQTLGQKAATRLTTL 67

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               + A+ S D   + + ++ EG  ++YV+   G   KR+S +  +      W+ +G+ 
Sbjct: 68  PAEELGAAISVDGKWVAYVANYEGASEVYVIPVAGGVAKRVSFE-NSRVRVQGWTAKGE- 125

Query: 361 IAFTKFSG----EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK------- 409
           + ++  SG      + + ++  D      L     ++      + + + F+R        
Sbjct: 126 VLYSTDSGFGPANNWMLRLVNPDTLATTDLPLADAVEGVV-DANNQYVYFTRFGLQVTGD 184

Query: 410 ----KDGDTGSKLYSIDLNGRNETLINTP---AYASDPQ-W 442
                 G    +L+   L G++E  + +         P  W
Sbjct: 185 NAKVYRGGAKGELWRFKLGGKDEAQLLSGQHQGSVRQPMLW 225



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 9/79 (11%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 201 ANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           +N + ++         + R+S + + +A    +        ++ +  +   + + + +  
Sbjct: 433 SNQKIISNGEGLGPYADIRWSADSRFIALTKSEIGKQRPQIVLYSVDENKAQALTSDKYE 492

Query: 260 ILAPRFSSNGKRALISVQK 278
             +P FSS+G+       +
Sbjct: 493 SYSPTFSSDGQWLYFLSNR 511



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 275 SVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +     +++   L      +L                D  ++ F SD +G + L+ M 
Sbjct: 188 VYRGGAKGELWRFKLGGKDEAQLLSGQHQGSVRQPMLWQD--RLYFISDSDGNDNLWSMA 245

Query: 333 SNGSDQKRISQDKEA 347
            +GSD K+++Q K+ 
Sbjct: 246 LDGSDAKQLTQYKDW 260


>gi|281410801|gb|ADA68813.1| HET-R [Podospora anserina]
          Length = 504

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 99/313 (31%), Gaps = 35/313 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQII------GKKFFS--SPASWRKIAHTISDDI--- 162
           G+ +  G     V  ++WD    +         G  +    SP   R  +  + D +   
Sbjct: 17  GQRLASGAGDRTV--KIWDPASGQCFQTLEGHNGSVYSVAFSPDGQRLASGAVDDTVKIW 74

Query: 163 -------YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                   Q++ G +G  +S       + + SG +  ++ + D                +
Sbjct: 75  DPASGQCLQTLEGHRGSVSSVAFSADGQRLASGAVDRTVKIWDPASGQCLQTLEGHTGSV 134

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               FSP+ Q+ A    DD     V + D    +  + +   R  + +  FS +G+R   
Sbjct: 135 SSVAFSPDGQRFASGVVDD----TVKVWDPASGQCLQTLEGHRGSVSSVAFSPDGQRFA- 189

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S   D  + I+         + L        S ++S D  +        G + + +    
Sbjct: 190 SGAGDRTIKIWD-PASGQCLQTLEGHRGWVYSVAFSADGQRFA---SGAGDDTVKIWDPA 245

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNL 392
                +  +    S     +S  G  +A +        I        Q    +E    ++
Sbjct: 246 SGQCLQTLEGHRGSVSSVAFSADGQRLA-SGAVDRTVKIW--DPASGQCLQTLEGHTGSV 302

Query: 393 QAPTWSPSGRSLI 405
            +  +SP G+   
Sbjct: 303 SSVAFSPDGQRFA 315



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 91/269 (33%), Gaps = 16/269 (5%)

Query: 141 GKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDR 198
           G++F S       KI    S    Q++ G +G  +S       + + SG +  ++ + D 
Sbjct: 227 GQRFASGAGDDTVKIWDPASGQCLQTLEGHRGSVSSVAFSADGQRLASGAVDRTVKIWDP 286

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
                          +    FSP+ Q+ A    DD     V + D    +  + +   R 
Sbjct: 287 ASGQCLQTLEGHTGSVSSVAFSPDGQRFASGVVDD----TVKIWDPASGQCLQTLEGHRG 342

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            + +  FS +G+R   S   D+ + I+         + L     +  S ++S D  ++  
Sbjct: 343 SVSSVAFSPDGQRFA-SGVVDDTVKIWD-PASGQCLQTLEGHKGLVYSVTFSADGQRLA- 399

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                G + + +         +  +    S     +SP G   A          + +   
Sbjct: 400 --SGAGDDTVKIWDPASGQCLQTLEGHRGSVHSVAFSPDGQRFASGAVDDT---VKIWDP 454

Query: 379 DGSQERLLVED--SNLQAPTWSPSGRSLI 405
              Q    +E    ++ +  +S  G+ L 
Sbjct: 455 ASGQCLQTLEGHNGSVSSVAFSADGQRLA 483



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 73/217 (33%), Gaps = 19/217 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  ++   FS + Q++A    D      V + D    +  + +      + +  FS
Sbjct: 1   LEGHNGSVYSVAFSADGQRLASGAGDR----TVKIWDPASGQCFQTLEGHNGSVYSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGK 325
            +G+R   S   D+ + I+         + L        S ++S D  ++   + DR   
Sbjct: 57  PDGQRLA-SGAVDDTVKIWD-PASGQCLQTLEGHRGSVSSVAFSADGQRLASGAVDRT-- 112

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +         +  +    S     +SP G   A          + V      Q   
Sbjct: 113 --VKIWDPASGQCLQTLEGHTGSVSSVAFSPDGQRFASGVVDDT---VKVWDPASGQCLQ 167

Query: 386 LVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +E    ++ +  +SP G+   F+    GD   K++ 
Sbjct: 168 TLEGHRGSVSSVAFSPDGQR--FASG-AGDRTIKIWD 201


>gi|298250552|ref|ZP_06974356.1| hypothetical protein Krac_3234 [Ktedonobacter racemifer DSM 44963]
 gi|297548556|gb|EFH82423.1| hypothetical protein Krac_3234 [Ktedonobacter racemifer DSM 44963]
          Length = 372

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 95/254 (37%), Gaps = 27/254 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                + ++    +S + +++A   +D    +RV+   T  +   +    F        +
Sbjct: 74  TFTGHNDVVLAASWSLDGKRIASVGFD--GAVRVWNASTGTELWKRA---FPG-THEVAY 127

Query: 266 SSNGKRALISVQKDEAMD----IYSVDLQSNATERLTN--TLFINISASYSPDSSQIVFE 319
           S +G+   +             +Y ++  S  T  ++      I    S+SPDSS I + 
Sbjct: 128 SPDGQYVAVGTYVGGGDAGSGLVYILNAASGQTSFISQKYDHGI-TGLSWSPDSSAIAY- 185

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S   G  Q+  +++NG + K        +     WSP G  +A+   +     + V+   
Sbjct: 186 SVENGTIQILDIKTNGRNNKVYRLAASDTVGAVAWSPNGKFLAWAVTTPGNPQVQVINIS 245

Query: 380 -GSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------- 430
            G       E S+ + A  WSP  + +  +     D   +++    +G  + +       
Sbjct: 246 VGHTMYNYHEHSDLINAIAWSPDSQKIATASN---DKTVRIWD-SASGTTQRVYQEHTGE 301

Query: 431 INTPAYASDPQWVG 444
           + T +++ D  ++ 
Sbjct: 302 VVTVSWSKDGAYLA 315



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 103/310 (33%), Gaps = 45/310 (14%)

Query: 109 QVLVTGRVIKEGKDRLRVEF----RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
            V++      +GK    V F    R+W+     ++  + F  +               ++
Sbjct: 80  DVVLAASWSLDGKRIASVGFDGAVRVWNASTGTELWKRAFPGT---------------HE 124

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                 G + +   +V            + +++       +++   D  +    +SP+  
Sbjct: 125 VAYSPDGQYVAVGTYV---GGGDAGSGLVYILNAASGQTSFISQKYDHGITGLSWSPDSS 181

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +AY + ++  I  + +     +    R+    + + A  +S NGK    +V       +
Sbjct: 182 AIAY-SVENGTIQILDIKTNGRNNKVYRLAASDT-VGAVAWSPNGKFLAWAVTTPGNPQV 239

Query: 285 YSVDLQSNATERLTNTLFINISAS-------YSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             +++         +T++     S       +SPDS +I   S+    + + +  S    
Sbjct: 240 QVINISVG------HTMYNYHEHSDLINAIAWSPDSQKIATASN---DKTVRIWDSASGT 290

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAP 395
            +R+ Q+         WS  G  +A          + V         L+      ++   
Sbjct: 291 TQRVYQEHTGEVVTVSWSKDGAYLASGSTDKT---VHVFSATTGITSLVYRGHTGSVFGV 347

Query: 396 TWSPSGRSLI 405
            WSP G+ + 
Sbjct: 348 VWSPEGKRIA 357



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 76/192 (39%), Gaps = 14/192 (7%)

Query: 241 LMDTRIDRAPKRIGNFRSMI---LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +  T+  R    +  F       LA  +S +GKR   SV  D A+ +++    +   +R 
Sbjct: 60  ISTTKSARPGTELATFTGHNDVVLAASWSLDGKRIA-SVGFDGAVRVWNASTGTELWKR- 117

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPV 353
                 +   +YSPD   +   +   G +     +Y++ +       ISQ  +       
Sbjct: 118 -AFPGTH-EVAYSPDGQYVAVGTYVGGGDAGSGLVYILNAASGQTSFISQKYDHGITGLS 175

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKD 411
           WSP    IA+         I  +K +G   ++  L     + A  WSP+G+ L ++    
Sbjct: 176 WSPDSSAIAY-SVENGTIQILDIKTNGRNNKVYRLAASDTVGAVAWSPNGKFLAWAVTTP 234

Query: 412 GDTGSKLYSIDL 423
           G+   ++ +I +
Sbjct: 235 GNPQVQVINISV 246


>gi|261414780|ref|YP_003248463.1| WD40 domain protein beta Propeller [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371236|gb|ACX73981.1| WD40 domain protein beta Propeller [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 403

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 53/317 (16%), Positives = 101/317 (31%), Gaps = 65/317 (20%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           KG     I++ +         + + +M+ DG N R LT S + + + PR +P+  KV + 
Sbjct: 45  KGKIEGAIVWATSRA---NPHHDIWIMNADGTNARALTKSNN-VDWFPRIAPDGSKVLFN 100

Query: 230 TY----------DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                       +  +   ++ +        K + N         +  +GK  + S    
Sbjct: 101 RSKGGWVPENDANYPEKWDLWTVGIDGTNETKIVEN----ATWGTWRPDGKSIVFS---- 152

Query: 280 EAMDIYSVDLQSNATERLTNTLF-------INISASYSPDSSQIVFE---SDREGK---- 325
            A  ++++DL S     + +          I    + SPD   +      S RE      
Sbjct: 153 RAGKVFTMDLASKKETLVLDGEKVFKKAGVILQEPNMSPDGKHLAITLRGSMRETGVWDL 212

Query: 326 -EQLYV---------MQSNGSDQKRISQDKEASYFDPV---W--SPQGDLIAFTKFSGEK 370
            + ++             +G+   R++         P    W  +  G  +    F G  
Sbjct: 213 TKNVWTKSGDGCQIDWNFDGTKLYRVNPTGNGGTAAPSEILWFTAKDGKQVEKVGFFGIP 272

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG------DTGSKLYSIDLN 424
             + +M   G +       S+   P  SP G+ L++     G      D    ++ I   
Sbjct: 273 KNVKLMDLPGRR-------SHEYFPRLSPDGKWLVWGATDKGHDHDLFDYELYIWKIGEP 325

Query: 425 GRNETLINTP-AYASDP 440
               T I         P
Sbjct: 326 VETATRITYNSGNDRWP 342



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 12/98 (12%)

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDG--- 412
           +G ++  T  +     I +M  DG+  R L + +N    P  +P G  ++F+R K G   
Sbjct: 49  EGAIVWATSRANPHHDIWIMNADGTNARALTKSNNVDWFPRIAPDGSKVLFNRSKGGWVP 108

Query: 413 ------DTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                      L+++ ++G NET I     A+   W  
Sbjct: 109 ENDANYPEKWDLWTVGIDGTNETKIVE--NATWGTWRP 144



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/248 (11%), Positives = 69/248 (27%), Gaps = 72/248 (29%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S+  +V E+  +   K  L  +  DG N   +  +         + P+ + + ++     
Sbjct: 102 SKGGWVPENDANYPEKWDLWTVGIDGTNETKIVEN----ATWGTWRPDGKSIVFSRAGKV 157

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKD-------------- 279
             + +      +    +++     +IL  P  S +GK   I+++                
Sbjct: 158 FTMDLASKKETLVLDGEKVFKKAGVILQEPNMSPDGKHLAITLRGSMRETGVWDLTKNVW 217

Query: 280 -------------EAMDIYSVDLQSNATE-----------------------------RL 297
                        +   +Y V+   N                                +L
Sbjct: 218 TKSGDGCQIDWNFDGTKLYRVNPTGNGGTAAPSEILWFTAKDGKQVEKVGFFGIPKNVKL 277

Query: 298 TNTLFI---NISASYSPDSSQIVFESDREGKEQ--------LYVMQSNGSDQKRISQDKE 346
            +             SPD   +V+ +  +G +         ++ +        RI+ +  
Sbjct: 278 MDLPGRRSHEYFPRLSPDGKWLVWGATDKGHDHDLFDYELYIWKIGEPVETATRITYNSG 337

Query: 347 ASYFDPVW 354
              +  +W
Sbjct: 338 NDRWPDIW 345



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 62/187 (33%), Gaps = 16/187 (8%)

Query: 132 DVKDRKQ---IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           D+  +K+   + G+K F       +  +   D  + +IT       + +  ++++V +  
Sbjct: 161 DLASKKETLVLDGEKVFKKAGVILQEPNMSPDGKHLAITLRGSMRETGVWDLTKNVWTKS 220

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                   + DG  +  + P+ +     P      + + +   D + + +V       + 
Sbjct: 221 GDGCQIDWNFDGTKLYRVNPTGNGGTAAPS-----EILWFTAKDGKQVEKVGFFGIPKNV 275

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNT 300
               +   RS    PR S +GK  +             D  + I+ +        R+T  
Sbjct: 276 KLMDLPGRRSHEYFPRLSPDGKWLVWGATDKGHDHDLFDYELYIWKIGEPVETATRITYN 335

Query: 301 LFINISA 307
              +   
Sbjct: 336 SGNDRWP 342


>gi|171677167|ref|XP_001903535.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936651|emb|CAP61310.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1314

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 98/311 (31%), Gaps = 23/311 (7%)

Query: 136  RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS----ESVVSGIIKN 191
             + +I + F     +W  +   +  D    +   +G   S    V     + + SG    
Sbjct: 841  ERSLIRELFKKEEPNWMILKPRMEADWNACVQTLEGHGGSVRSVVFSADGQRLASGSDDR 900

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            ++ + D                +    FS + Q++A  + D      V + D       +
Sbjct: 901  TVKIWDAATGACVQTLEGHGGWVSSVVFSADGQRLASGSDDR----TVKIWDAATGACVQ 956

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYS 310
             +     ++++  FS++G+R   S   D  + I+  D  + A  + L        S  +S
Sbjct: 957  TLEGHGGLVMSVVFSADGQRLA-SGSDDRTVKIW--DAATGACVQTLEGHGGWVSSVVFS 1013

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             D  ++   SD      + +  +      +  +         V+S  G  +A        
Sbjct: 1014 ADGQRLASGSD---DRTVKIWDAATGACVQTLEGHGGLVMSVVFSADGQRLA---SGSGD 1067

Query: 371  FAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              + +           +E     +++  +S  G+ L        D   K++        +
Sbjct: 1068 KTVKIWDAATGACVQTLEGHGGWVRSVVFSADGQRLASGSH---DKTVKIWDAATGACVQ 1124

Query: 429  TLINTPAYASD 439
            TL     +   
Sbjct: 1125 TLEGHGGWVRS 1135



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 63/192 (32%), Gaps = 14/192 (7%)

Query: 219  FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FSP +  +   +   +   ++    M+   +   + +      + +  FS++G+R   S 
Sbjct: 838  FSPERSLIRELFKKEEPNWMILKPRMEADWNACVQTLEGHGGSVRSVVFSADGQRLA-SG 896

Query: 277  QKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D  + I+  D  + A  + L        S  +S D  ++   SD      + +  +  
Sbjct: 897  SDDRTVKIW--DAATGACVQTLEGHGGWVSSVVFSADGQRLASGSD---DRTVKIWDAAT 951

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQ 393
                +  +         V+S  G  +A +        I             +E     + 
Sbjct: 952  GACVQTLEGHGGLVMSVVFSADGQRLA-SGSDDRTVKIW--DAATGACVQTLEGHGGWVS 1008

Query: 394  APTWSPSGRSLI 405
            +  +S  G+ L 
Sbjct: 1009 SVVFSADGQRLA 1020



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 48/126 (38%), Gaps = 9/126 (7%)

Query: 170  KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             G +   ++F +  + + SG    ++ + D                +    FS + Q++A
Sbjct: 1087 HGGWVRSVVFSADGQRLASGSHDKTVKIWDAATGACVQTLEGHGGWVRSVVFSADGQRLA 1146

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D+     V + D       + +      +++  FS++G+R   S   DE + I+  
Sbjct: 1147 SGSGDE----TVKIWDAATGACVQTLEGHGGWVMSVVFSADGQRLA-SGSGDETVKIW-- 1199

Query: 288  DLQSNA 293
            D  +  
Sbjct: 1200 DAATGK 1205


>gi|330508213|ref|YP_004384641.1| WD40-like beta Propeller repeat-containing protein [Methanosaeta
           concilii GP-6]
 gi|328929021|gb|AEB68823.1| WD40-like Beta Propeller Repeat protein [Methanosaeta concilii
           GP-6]
          Length = 1216

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 85/232 (36%), Gaps = 16/232 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   +   A  D+        M        + +       ++P  S  G+R +    +  
Sbjct: 42  PAIDEYVVAWSDNRSGNYDIFMYDLETGLERWVCIDPFFQISPAVS--GERIVWQDMRSG 99

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             DIY  D+ +     +T           S   +++V+  DR+G  Q++++  +  ++  
Sbjct: 100 NGDIYMYDVINKTESAITTAEGNQTQPDIS--GNRVVWADDRKGTYQIHLLDLSSRNEVE 157

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSP 399
           IS  K      P  S     I +       F I +      +E  +     +   P+ S 
Sbjct: 158 ISSAK-GEQIRPKISDD--RIVWMDERSGDFDIYMYDISTGKESAVSTGPGDQSFPSVSK 214

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP----QWVGFMD 447
               + ++  + G+  S +  +DL+   ET IN     +DP    +++ +++
Sbjct: 215 D--IVAWADNRTGE--SDIAFMDLSSGKETTINKSGIQTDPRVYGRYIAYLN 262



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 90/249 (36%), Gaps = 16/249 (6%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNF 256
            D      +  +   I  EP  S  ++ V +  Y    +   + + D  I      I + 
Sbjct: 270 YDIETSADIALAPGSIKMEPAIS--ERGVVWTDYRKGTNDPDIQMFDFEILADIS-ITSG 326

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                 P  S +    + +  +D   ++Y  ++ +    ++T   F + S   S  +  +
Sbjct: 327 PFNHTNPSISED--SVVWTDNRDGNFNVYLFNITTGKETQITEDSFDHSSPDIS--NKNL 382

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           ++     G  Q+++   +  + K+++ D+    +  +    G+ I +         I + 
Sbjct: 383 IWTDMSLGNLQIFLRNLSTKETKQVTIDQSDHRYGMI---DGNNIIWIDARSGGEQIYLY 439

Query: 377 KKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTP 434
                QE+ +    S   +P        +++   + G+    LY  +L    ET I   P
Sbjct: 440 DIITGQEKQITAAQSLKLSPVIHQD--RIVWIDSRSGEDKWDLYLYNLTTGEETAICTNP 497

Query: 435 AYASDPQWV 443
           A  + P W+
Sbjct: 498 ARQAQP-WI 505



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/290 (15%), Positives = 90/290 (31%), Gaps = 26/290 (8%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF-----EPRFSP 221
           T   G  +   +    S         + + + DG +   +       L       P  S 
Sbjct: 585 TPNDGKGDPYQIKPYHSSKIISDNKIVWMDNSDGYSQIKMRYINSDPLLLLEADYP--ST 642

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N   + ++     +   +Y  D    R+ K I       L P+ S  G   + S  +   
Sbjct: 643 NGSLLVWSDNRRGN-WNIYGFD-FFTRSEKPITKGDYDQLYPKAS--GDIVVYSDYRSGD 698

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIY  ++ +     +       +  S S     +V++ +  G   +Y+ + +      I
Sbjct: 699 SDIYMTNIATGVESPVATGKRDQMWPSIS--GDLVVWQDNSSGNWDIYMKELSTDKTTPI 756

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                     P  S  GDL+ +       F I V       E  L  D +   P  S  G
Sbjct: 757 -YKGSGQQMYPAIS--GDLVVWQDSRNGDFDIYVKDLVNGTETKLTGDGDQLYPDIS--G 811

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ----WVGFMD 447
            ++ +     GD     +    + +           ++P     ++ ++D
Sbjct: 812 YTIAWQDATTGDISYYFW----DKKWGKTYPREGEQTNPVVSGNYIAYVD 857



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 78/212 (36%), Gaps = 17/212 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +    +P  S    +V +A  D +   +++L+D       + I + +   + P+ S +  
Sbjct: 120 EGNQTQPDIS--GNRVVWAD-DRKGTYQIHLLDLSSRNEVE-ISSAKGEQIRPKISDD-- 173

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R +   ++    DIY  D+ +     ++         S S D   + +  +R G+  +  
Sbjct: 174 RIVWMDERSGDFDIYMYDISTGKESAVSTGPGDQSFPSVSKD--IVAWADNRTGESDIAF 231

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M  +   +  I  +K     DP     G  IA+     +   I +   + S +  L   S
Sbjct: 232 MDLSSGKETTI--NKSGIQTDPRV--YGRYIAYLNNHTD---INLYDIETSADIALAPGS 284

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               P  S   R ++++  + G     +   D
Sbjct: 285 IKMEPAIS--ERGVVWTDYRKGTNDPDIQMFD 314



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 72/226 (31%), Gaps = 21/226 (9%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P  S +   +     +      +Y+ +   D+    I       + P  S  G   + 
Sbjct: 722 MWPSISGD---LVVWQDNSSGNWDIYMKELSTDK-TTPIYKGSGQQMYPAIS--GDLVVW 775

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
              ++   DIY  DL +    +LT      +    S     I ++    G    Y     
Sbjct: 776 QDSRNGDFDIYVKDLVNGTETKLT-GDGDQLYPDIS--GYTIAWQDATTGDISYYFWDKK 832

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                  +  +E    +PV S  G+ IA+   SGE  +I  +     ++ L+        
Sbjct: 833 WGK----TYPREGEQTNPVVS--GNYIAYVDGSGEDTSIRKLDLASWKDELVQAGPGQAK 886

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           P+     + L++     G   S   +    G+   +   P   S P
Sbjct: 887 PS---MDKKLVWINTHSGKPRSVAVAA---GQTSVISKVPGDQSHP 926



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 55/154 (35%), Gaps = 8/154 (5%)

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
               + +          ++L    +   P  I    +  +    S++G+  +    ++   
Sbjct: 1066 GDYLVFQNNKAGS-WDIFLWKQGMGTQPVSIVADPADQINA--STDGRTVVWQDNRNGNW 1122

Query: 283  DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            DIY+ DL ++   ++T      I+     ++  IV++  R G   +YV   N   +  I 
Sbjct: 1123 DIYAYDLNTSKEMQITTDSADQINPDV--ENGVIVWQDKRNGDWDIYVYDQNVGRETPIC 1180

Query: 343  QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             D   +  +P    +   I +T        I + 
Sbjct: 1181 TD-PGNQMEPRI--RTGRIVWTDDRSGDKDIYIY 1211



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 80/229 (34%), Gaps = 25/229 (10%)

Query: 223  QQKVAYAT------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALIS 275
               +A+        Y  ED   +   D  ID + + +         P   S +       
Sbjct: 977  GNIIAWVARNPDNQYQIEDYWCIRTFDISIDNSTELVYGLE--NSTPISLSDD--YLAYL 1032

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +      +YS  L    T   +    IN+ A        +VF++++ G   +++ +  G
Sbjct: 1033 RKTYFGWMVYSRPLYEKETAPESPPSGINVRA----GGDYLVFQNNKAGSWDIFLWKQ-G 1087

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
               + +S   + +      S  G  + +       + I     + S+E  +  DS  Q  
Sbjct: 1088 MGTQPVSIVADPADQINA-STDGRTVVWQDNRNGNWDIYAYDLNTSKEMQITTDSADQ-- 1144

Query: 396  TWSPS--GRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
              +P      +++  K++GD    +Y  D N GR   +   P    +P+
Sbjct: 1145 -INPDVENGVIVWQDKRNGDW--DIYVYDQNVGRETPICTDPGNQMEPR 1190


>gi|298242911|ref|ZP_06966718.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
            44963]
 gi|297555965|gb|EFH89829.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
            44963]
          Length = 1248

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 59/337 (17%), Positives = 113/337 (33%), Gaps = 43/337 (12%)

Query: 102  DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP-------ASWRKI 154
             W+  GA                    RLWDV+  +  +     S+        +  R +
Sbjct: 813  AWSPDGA---------TLASGSFDHTIRLWDVQRGRSRVVLSGHSAAVYSLTFTSDSRHL 863

Query: 155  AHTISDDIYQSITGEKGDFNSRILFVSESV------------VSGIIKNSLCVMDRDGAN 202
                 D   +    E+G+    +   + S+            VSG     + V +     
Sbjct: 864  LSGSDDGTLRLWEVERGESLRVLQGYAASLYDLDWSPDATQLVSGGTDTHVTVWEVASGM 923

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             R +     + ++   +SP  + +A   +D    +R++   T       R  +    + +
Sbjct: 924  PRGVLRGHSRTVYGVAWSPYGRLLASCGWD--HAIRLWDPTTGTCVQILRDLDHPDTVFS 981

Query: 263  -PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES 320
               +S +G+R            +   D  + +   L+          ++SPD +++V   
Sbjct: 982  GVAWSPDGERLA---SGTLLQGVLVWDGTARSPHWLSQQFPPWIRRVAWSPDGTRLV--- 1035

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKK 378
               G   +YV  +      +     + +     WSP G  +A        E   + V   
Sbjct: 1036 GGGGDGHVYVWDAFDGTLLQQLSGHQGAVMSVAWSPDGSRLASGGGSRGQEDGELLVWDA 1095

Query: 379  -DGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGD 413
             +G   R+L      + A TWSP+G+ LI S  +DG 
Sbjct: 1096 HNGEYVRILTGHPGGVSALTWSPNGQMLI-SGGRDGK 1131



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 54/353 (15%), Positives = 109/353 (30%), Gaps = 45/353 (12%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSS------PASWRKIAHTISD-DIYQSITGEKGD 172
                     R+WD K    +       +          R++A + SD  I        G 
Sbjct: 694  ASGGHDASIRVWDPKLGTLLQDVSHPGAVWALAWSTDGRRLASSGSDGHIQLWKRQPTGL 753

Query: 173  FNSRILFVSESVV--------------SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
             + R      +                S     ++ +                Q +    
Sbjct: 754  AHDRQALAGHNNWVRGLAFSPDGSVLASASWDGTVKLWALTSGRCVQTLKGHTQRVHCLA 813

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            +SP+   +A  ++D      + L D +  R+   +    + + +  F+S+ +  L S   
Sbjct: 814  WSPDGATLASGSFDH----TIRLWDVQRGRSRVVLSGHSAAVYSLTFTSDSRHLL-SGSD 868

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D  + ++ V+ +  +   L           +SPD++Q+V          + V +      
Sbjct: 869  DGTLRLWEVE-RGESLRVLQGYAASLYDLDWSPDATQLV---SGGTDTHVTVWEVASGMP 924

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVE----DSNLQ 393
            + + +    + +   WSP G L+A     G   AI +         ++L +    D+   
Sbjct: 925  RGVLRGHSRTVYGVAWSPYGRLLASC---GWDHAIRLWDPTTGTCVQILRDLDHPDTVFS 981

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
               WSP G  L       G     +   D   R+   ++   P +     W  
Sbjct: 982  GVAWSPDGERLA-----SGTLLQGVLVWDGTARSPHWLSQQFPPWIRRVAWSP 1029



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 84/240 (35%), Gaps = 15/240 (6%)

Query: 159  SDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
               I + +      F+            SG +   + V D    +  +L+      +   
Sbjct: 966  CVQILRDLDHPDTVFSGVAWSPDGERLASGTLLQGVLVWDGTARSPHWLSQQFPPWIRRV 1025

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--S 275
             +SP+  ++            VY+ D       +++   +  +++  +S +G R      
Sbjct: 1026 AWSPDGTRLV----GGGGDGHVYVWDAFDGTLLQQLSGHQGAVMSVAWSPDGSRLASGGG 1081

Query: 276  VQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             +  E  ++   D  +    R LT       + ++SP+   ++    R+GK  +   + +
Sbjct: 1082 SRGQEDGELLVWDAHNGEYVRILTGHPGGVSALTWSPNGQMLI-SGGRDGK--VRWWEVH 1138

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQ 393
              +   + +  + +      SP G  +A    SG+  AI +   + G   R L  D   +
Sbjct: 1139 SGECVHVQEGHQGAVHALKVSPDGGRLA---SSGDDGAIVLWDLERGKPLRTLRRDRPYE 1195



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 93/251 (37%), Gaps = 15/251 (5%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  + V    G  +  +  +    ++   FSP+++++A A++D      + L D    
Sbjct: 614 SGRGEVRVWREAGQTLHLVWSAHADSVWTLAFSPDERQLASASWDG----TIKLWDIE-S 668

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           RA   +G   S I+   FS +G              I   D +     +  +      + 
Sbjct: 669 RALLWVGWHTSAIVCLAFSPDGDLLA---SGGHDASIRVWDPKLGTLLQDVSHPGAVWAL 725

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKF 366
           ++S D  ++   S  +G  QL+  Q  G    R +     ++     +SP G ++A   +
Sbjct: 726 AWSTDGRRLA-SSGSDGHIQLWKRQPTGLAHDRQALAGHNNWVRGLAFSPDGSVLASASW 784

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            G    +  +      + L      +    WSP G +L        D   +L+ +   GR
Sbjct: 785 DGTV-KLWALTSGRCVQTLKGHTQRVHCLAWSPDGATLA---SGSFDHTIRLWDVQR-GR 839

Query: 427 NETLINTPAYA 437
           +  +++  + A
Sbjct: 840 SRVVLSGHSAA 850



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 95/266 (35%), Gaps = 26/266 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D +   + ++      I+    FSP+   +A           + + D +
Sbjct: 654 SASWDGTIKLWDIESRALLWVGWHTSAIVCL-AFSPDGDLLA----SGGHDASIRVWDPK 708

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFI 303
           +    + + +    + A  +S++G+R   S   D  + ++       A +R  L      
Sbjct: 709 LGTLLQDV-SHPGAVWALAWSTDGRRLASSGS-DGHIQLWKRQPTGLAHDRQALAGHNNW 766

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               ++SPD S +   S  +G  +L+ +        +  +          WSP G  +A 
Sbjct: 767 VRGLAFSPDGSVLASAS-WDGTVKLWAL--TSGRCVQTLKGHTQRVHCLAWSPDGATLAS 823

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
             F      I +      + R+++   +    +  ++   R L+       D   +L+ +
Sbjct: 824 GSFD---HTIRLWDVQRGRSRVVLSGHSAAVYSLTFTSDSRHLLSGSD---DGTLRLWEV 877

Query: 422 DLNGRNETLINTPAYAS---DPQWVG 444
           +   R E+L     YA+   D  W  
Sbjct: 878 E---RGESLRVLQGYAASLYDLDWSP 900


>gi|296125252|ref|YP_003632504.1| Tetratricopeptide TPR_2 repeat protein [Brachyspira murdochii DSM
           12563]
 gi|296017068|gb|ADG70305.1| Tetratricopeptide TPR_2 repeat protein [Brachyspira murdochii DSM
           12563]
          Length = 2335

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 75/197 (38%), Gaps = 25/197 (12%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-- 325
           +G     + +     DI+++D  +  T RLT +  I+ S S    S  +VF S R+    
Sbjct: 63  DGTWVYYARENAGNTDIFAIDSYTLETFRLTRSPGIDTSVSVDDKSKYVVFSSTRDDAFG 122

Query: 326 --EQLYVMQSNG------------SDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEK 370
                 ++   G                R++ D +    DPV S +G++IAF        
Sbjct: 123 DIYAYKLVNLVGIRTSKNNLENLEQSIIRLT-DYKGYDVDPVISHRGNMIAFVSDRDAGI 181

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN--- 427
             +  M+ +G   R L  D    +P +S     + F   K G+  S+L  +DL       
Sbjct: 182 KKLFTMRNNGKDVRKL-SDIEASSPAFSFDDTKIAFITSKIGEPYSQLAILDLTSSTNDQ 240

Query: 428 ---ETLINTPAYASDPQ 441
                L +T  +  +P 
Sbjct: 241 TNLTILTSTKTFKFNPT 257



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 89/239 (37%), Gaps = 30/239 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            LT        +     +   V YA  +  +   ++ +D+       R+     +  +  
Sbjct: 46  SLTSGEVNPALDAVIDRDGTWVYYARENAGNT-DIFAIDSYT-LETFRLTRSPGIDTSVS 103

Query: 265 FSSNGKRALISVQKDEAM-DIY---SVDLQS------------NATERLTNTLFINISAS 308
                K  + S  +D+A  DIY    V+L               +  RLT+    ++   
Sbjct: 104 VDDKSKYVVFSSTRDDAFGDIYAYKLVNLVGIRTSKNNLENLEQSIIRLTDYKGYDVDPV 163

Query: 309 YSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKF 366
            S   + I F SDR+ G ++L+ M++NG D +++S   +     P +S     IAF T  
Sbjct: 164 ISHRGNMIAFVSDRDAGIKKLFTMRNNGKDVRKLS---DIEASSPAFSFDDTKIAFITSK 220

Query: 367 SGEKF-AIGVMKKDGS-----QERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKL 418
            GE +  + ++    S        +L      +  PT+      + F  +KD D    L
Sbjct: 221 IGEPYSQLAILDLTSSTNDQTNLTILTSTKTFKFNPTFYNDDTIIFFEIEKDSDRDGNL 279



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 57/173 (32%), Gaps = 25/173 (14%)

Query: 297 LTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           LT+        A    D + + +  +  G   ++ + S   +  R+++            
Sbjct: 47  LTSGEVNPALDAVIDRDGTWVYYARENAGNTDIFAIDSYTLETFRLTR-SPGIDTSVSVD 105

Query: 356 PQGDLIAFTKFSGEKF-AIGVM----------------KKDGSQERLLVEDSNLQAPTWS 398
            +   + F+    + F  I                     + S  RL         P  S
Sbjct: 106 DKSKYVVFSSTRDDAFGDIYAYKLVNLVGIRTSKNNLENLEQSIIRLTDYKGYDVDPVIS 165

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-----NTPAYASDPQWVGFM 446
             G  + F   +D     KL+++  NG++   +     ++PA++ D   + F+
Sbjct: 166 HRGNMIAFVSDRDAGI-KKLFTMRNNGKDVRKLSDIEASSPAFSFDDTKIAFI 217


>gi|20091353|ref|NP_617428.1| WD-40 repeat-containing protein [Methanosarcina acetivorans C2A]
 gi|19916485|gb|AAM05908.1| WD40-repeat containing protein [Methanosarcina acetivorans C2A]
          Length = 1233

 Score = 87.8 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 98/327 (29%), Gaps = 48/327 (14%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV--- 185
           RLWD    KQI          +        S D  + I     D  SR+   +       
Sbjct: 653 RLWDTATGKQIFVLNQTDPVRNV-----VFSPD-GKYIATASADNTSRLWDTTTGKQIFD 706

Query: 186 -SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR------------------FSPNQQKV 226
                  ++ V   DG  +   +  +   L+                     FSP+ + +
Sbjct: 707 MKHDGPVNIVVFSPDGKYVATASADKKARLWNATTGKKIFDMKHDSGINTVVFSPDGKYI 766

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             A+ D    +       +I             +    FS +GK    +   D    ++ 
Sbjct: 767 VTASDDKTAGVWNTTTGKKIFDM-----KHDGSVNTVVFSPDGKYIA-TASADNTSRLW- 819

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DK 345
            D  +       N      +  +SPD   +   +  +    L+    + S  K+IS    
Sbjct: 820 -DTATGEKIFFLNHYGWVNTVVFSPDGKYVA-TASADKTAHLW----DVSTGKQISYLRH 873

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           ++   + V+ P G  +                  G +  +L     +    +SP G+ + 
Sbjct: 874 DSGVNNVVFGPDGKYVVTASADKTADVWNT--TTGEKIFVLNHTGRVNNAVFSPDGKYIA 931

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +     D  S+L+     G+   ++N
Sbjct: 932 TAS---ADNTSRLWDT-TTGKQIFVLN 954



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 56/313 (17%), Positives = 108/313 (34%), Gaps = 37/313 (11%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASW------RKIAHTISDD---IYQSITGEKGDFNSRILF 179
           RLWDV   KQI          +       + +A   +D    ++ + TGE     +    
Sbjct: 571 RLWDVSTGKQIFVLNHTDPVRNVVFSPDGKYVATASADKTAGVWNTTTGEGISVLNHTGR 630

Query: 180 VSESVVSGIIKN--------SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           V+  V S   K         +  + D       ++    D +     FSP+ + +A A+ 
Sbjct: 631 VNNVVFSPDGKYIATASDDNTSRLWDTATGKQIFVLNQTDPVRNV-VFSPDGKYIATASA 689

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D+       L DT   +    + +   + +   FS +GK    +   D+   +++     
Sbjct: 690 DNTSR----LWDTTTGKQIFDMKHDGPVNI-VVFSPDGKYVA-TASADKKARLWNA-TTG 742

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                + +   IN    +SPD   IV  SD    ++   + +  + +K      + S   
Sbjct: 743 KKIFDMKHDSGINTV-VFSPDGKYIVTASD----DKTAGVWNTTTGKKIFDMKHDGSVNT 797

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKK 410
            V+SP G  IA            +      ++   L     +    +SP G+ +  +   
Sbjct: 798 VVFSPDGKYIATASADNTS---RLWDTATGEKIFFLNHYGWVNTVVFSPDGKYVATAS-- 852

Query: 411 DGDTGSKLYSIDL 423
             D  + L+ +  
Sbjct: 853 -ADKTAHLWDVST 864



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 52/300 (17%), Positives = 109/300 (36%), Gaps = 37/300 (12%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R +      D+   +    G          + V +    N+  + D       ++    D
Sbjct: 539 RVVILKHYSDVNNVVFSPDG----------KYVATASNDNTSRLWDVSTGKQIFVLNHTD 588

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +     FSP+ + VA A+ D      V+   T    +   + N    +    FS +GK 
Sbjct: 589 PVRNV-VFSPDGKYVATASAD--KTAGVWNTTTGEGIS---VLNHTGRVNNVVFSPDGKY 642

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              +   D    ++  D  +     + N      +  +SPD   I   +  +   +L+  
Sbjct: 643 IA-TASDDNTSRLW--DTATGKQIFVLNQTDPVRNVVFSPDGKYIA-TASADNTSRLW-- 696

Query: 332 QSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             + +  K+I   K +      V+SP G  +A T  + +K  +      G +   +  DS
Sbjct: 697 --DTTTGKQIFDMKHDGPVNIVVFSPDGKYVA-TASADKKARLW-NATTGKKIFDMKHDS 752

Query: 391 NLQAPTWSPSGRSLIFSRKK------DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            +    +SP G+ ++ +         +  TG K++ +  +G     +NT  ++ D +++ 
Sbjct: 753 GINTVVFSPDGKYIVTASDDKTAGVWNTTTGKKIFDMKHDGS----VNTVVFSPDGKYIA 808



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 64/348 (18%), Positives = 114/348 (32%), Gaps = 69/348 (19%)

Query: 130  LWDVKDRKQIIGKKFFSSPASW------RKIAHTISD---DIYQSITGEKGDFNSRILFV 180
            LWDV   KQI   +  S   +       + +    +D   D++ + TGEK    +    V
Sbjct: 859  LWDVSTGKQISYLRHDSGVNNVVFGPDGKYVVTASADKTADVWNTTTGEKIFVLNHTGRV 918

Query: 181  SESVVSGIIKN--------SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            + +V S   K         +  + D       ++    D +     FSP+++ +A A+ D
Sbjct: 919  NNAVFSPDGKYIATASADNTSRLWDTTTGKQIFVLNQTDPVRNV-VFSPDRKYIATASDD 977

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +       L DT   +    + N    +    FSS+GK    +   D    ++  D  + 
Sbjct: 978  NTSR----LWDTATGKQI-LVLNHDGPVNTVVFSSDGKYIA-TASDDNTSRLW--DTATG 1029

Query: 293  ATERLTNTLFINISASYSPDSSQIV-------------------FESDREGKEQLYVMQS 333
                + N      +  +SPD   I                    F+   +G     V   
Sbjct: 1030 EEIFVLNHTDRVNNVVFSPDGKYIATAGDDNTSRLWGTATGEKIFDMKHDGPVNNVVFSP 1089

Query: 334  NG------------------SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            +G                  + +K    +        V+SP G  IA       +     
Sbjct: 1090 DGKYVATAGYDNTACLWDTATGEKIFVLNHAGRVNTVVFSPDGKYIATASADKARL---W 1146

Query: 376  MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                G Q   L  DS +    +SP G+ +  +     D  ++L++  L
Sbjct: 1147 NATTGKQISYLRHDSGVNNVVFSPDGKYIATASV---DKTARLWTAKL 1191



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 19/209 (9%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                      I    S +    FS +GK    +   D    ++  D+ +     + N  
Sbjct: 531 QGLLSMPHRVVILKHYSDVNNVVFSPDGKYVA-TASNDNTSRLW--DVSTGKQIFVLNHT 587

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +  +SPD   +   S     +   V  +   +   +  +      + V+SP G  I
Sbjct: 588 DPVRNVVFSPDGKYVATAS---ADKTAGVWNTTTGEGISVL-NHTGRVNNVVFSPDGKYI 643

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK------DGDTG 415
           A T        +      G Q  +L +   ++   +SP G+ +  +         D  TG
Sbjct: 644 A-TASDDNTSRLW-DTATGKQIFVLNQTDPVRNVVFSPDGKYIATASADNTSRLWDTTTG 701

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVG 444
            +++ +  +G     +N   ++ D ++V 
Sbjct: 702 KQIFDMKHDG----PVNIVVFSPDGKYVA 726


>gi|298242217|ref|ZP_06966024.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297555271|gb|EFH89135.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 702

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 83/270 (30%), Gaps = 78/270 (28%)

Query: 218 RFSPNQQKVAYATYDDEDILR-----VYLMDTRIDRA----PKRIGNFRSMILAPRFSSN 268
             SP+ + V ++    +         +YL+           P R+         P +S +
Sbjct: 26  ALSPDGRSVVFSLALKDKASNEVLSDIYLLRLDEHGQALNEPVRLTRGGKQNNFPVWSPD 85

Query: 269 GKRALISVQKDEA-MDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES------ 320
            +R L +  ++     ++ +++      +LTN    IN   ++SPD   I   S      
Sbjct: 86  SQRLLFTSNREGDKAQLWLLEMGGGEARKLTNFARGIN-EVAWSPDGKWIALTSAALNSD 144

Query: 321 -------------------------------------DREG----KEQLYVMQS------ 333
                                                D  G    +  ++VM +      
Sbjct: 145 EDDVLTGRKILDEAAKKRQDEEERYRQRTIKSVWYRLDGRGMLEKRMHVFVMPAPQPGDA 204

Query: 334 -----NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQ 382
                +    +R++   +  ++   W+P    I+      E +       +  +  +  +
Sbjct: 205 SEQPIDPQHIRRLTT-GDYDHYGIRWTPDSHEISLATNRNEDYDRTWVTDLWNIDIETGE 263

Query: 383 ERLLVEDS-NLQAPTWSPSGRSLIFSRKKD 411
            R L + S  + + +WSP G        +D
Sbjct: 264 MRCLTDSSLQVHSWSWSPDGSQAAVLAAQD 293



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/332 (13%), Positives = 105/332 (31%), Gaps = 87/332 (26%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA---- 229
           + R+LF S        K  L +++  G   R LT     I     +SP+ + +A      
Sbjct: 86  SQRLLFTSNREGD---KAQLWLLEMGGGEARKLTNFARGINEV-AWSPDGKWIALTSAAL 141

Query: 230 --------------------------TYDDEDILRVYLMDTRID---------------- 247
                                      Y    I  V+                       
Sbjct: 142 NSDEDDVLTGRKILDEAAKKRQDEEERYRQRTIKSVWYRLDGRGMLEKRMHVFVMPAPQP 201

Query: 248 ----------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA------MDIYSVDLQS 291
                     +  +R+          R++ +     ++  ++E        D++++D+++
Sbjct: 202 GDASEQPIDPQHIRRLTTGDYDHYGIRWTPDSHEISLATNRNEDYDRTWVTDLWNIDIET 261

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKE------QLYVMQSNGSDQKRISQDK 345
                LT++     S S+SPD SQ    + ++  +      +L ++    S+ + +  D 
Sbjct: 262 GEMRCLTDSSLQVHSWSWSPDGSQAAVLAAQDMNKEGISVIRLRLIAREDSEMRTLLSDL 321

Query: 346 EASY-------------FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +                + P WS  G  + F      +  +  +  + + +  L    ++
Sbjct: 322 DYDVAPTVGMRLGSPTPYQPRWSEDGKRVYFAIAEHGRVNLHAVDVEHNTQIPLTAGEHV 381

Query: 393 QAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  P G  +I+++ +      +LY ++L
Sbjct: 382 THYFDLLPGGHGIIYAQSQP-THPWELYRLEL 412



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 101/286 (35%), Gaps = 36/286 (12%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI-LFVSESVVSGIIK 190
           DV   ++I+ +          +        ++  +   +G    R+ +FV  +   G   
Sbjct: 147 DVLTGRKILDEAAKKRQDEEERYRQRTIKSVWYRL-DGRGMLEKRMHVFVMPAPQPGDAS 205

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI---- 246
                   D  +IR LT   D   +  R++P+  +++ AT  +ED  R ++ D       
Sbjct: 206 EQ----PIDPQHIRRLTTG-DYDHYGIRWTPDSHEISLATNRNEDYDRTWVTDLWNIDIE 260

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNT 300
               + + +    + +  +S +G +A +   +D   +      +  +  + +    L + 
Sbjct: 261 TGEMRCLTDSSLQVHSWSWSPDGSQAAVLAAQDMNKEGISVIRLRLIAREDSEMRTLLSD 320

Query: 301 LFINI--------------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           L  ++                 +S D  ++ F     G+  L+ +    + Q  ++  + 
Sbjct: 321 LDYDVAPTVGMRLGSPTPYQPRWSEDGKRVYFAIAEHGRVNLHAVDVEHNTQIPLTAGEH 380

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQERLLVE 388
            +++  +  P G  I + +         + + +     S+E  L  
Sbjct: 381 VTHYFDLL-PGGHGIIYAQSQPTHPWELYRLELRDGQPSEEHRLTH 425



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 23/131 (17%)

Query: 337 DQKRISQDKEASY---FDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQ----- 382
             ++++ D   +         SP G  + F+    +K        I +++ D        
Sbjct: 7   STRKLTHDDLWTLPEMGHVALSPDGRSVVFSLALKDKASNEVLSDIYLLRLDEHGQALNE 66

Query: 383 -ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL-------INTP 434
             RL         P WSP  + L+F+  ++GD  ++L+ +++ G            IN  
Sbjct: 67  PVRLTRGGKQNNFPVWSPDSQRLLFTSNREGDK-AQLWLLEMGGGEARKLTNFARGINEV 125

Query: 435 AYASDPQWVGF 445
           A++ D +W+  
Sbjct: 126 AWSPDGKWIAL 136


>gi|162456063|ref|YP_001618430.1| WD-40 repeat-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161166645|emb|CAN97950.1| WD-40 repeat protein [Sorangium cellulosum 'So ce 56']
          Length = 1177

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 95/266 (35%), Gaps = 20/266 (7%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             + +     +  V   DG+    +     + L    FSP+  ++   + D     R++  
Sbjct: 854  RIATAGTDKTARVFRADGSGEPVVLRGHAEHLLSVDFSPDGSRLVTGSAD--KTARIWRA 911

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            D R    P  +G     ++   FS  G R + +   +  + ++  D        L +   
Sbjct: 912  DGR--GQPIVLGVHDDRVVGVAFSPEGTRIV-TTSWNGILRVFE-DGVPGEPVVLRDERA 967

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDL 360
              + A++SPD   IV  S       + V  ++G    R+      + +      SP G  
Sbjct: 968  GLLRAAFSPDGQHIVATS----GPNVKVWPADGRGAPRVLPSGYEDRAIAAIAVSPDGSH 1023

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A     G    + +++ DG  + +L+    + ++   +S     L+       D  +++
Sbjct: 1024 VAIAALDGG---VRLLRVDGQGQPVLLSGLGAAVRTVAFSSDSARLVAVSS---DGIARV 1077

Query: 419  YSIDLNGRNETLINTPAYASDPQWVG 444
              +D  G   TL       +D  +  
Sbjct: 1078 LPVDGQGEAITLRAEGVTLTDAVFSP 1103



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/260 (20%), Positives = 91/260 (35%), Gaps = 20/260 (7%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            SVV+     +  V    G     L    +  L     S +  ++A  T   +   RV+  
Sbjct: 812  SVVTASEDGTARVWRLGGPGEPRLLRGHEGPLTGIAVSHDGSRIA--TAGTDKTARVFRA 869

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            D      P  +      +L+  FS +G R + +   D+   I+  D +      L     
Sbjct: 870  D--GSGEPVVLRGHAEHLLSVDFSPDGSRLV-TGSADKTARIWRADGR-GQPIVLGVHDD 925

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              +  ++SP+ ++IV  S       L V +     +  + +D+ A      +SP G  I 
Sbjct: 926  RVVGVAFSPEGTRIVTTS---WNGILRVFEDGVPGEPVVLRDERAGLLRAAFSPDGQHIV 982

Query: 363  FTKFSGEKFAIGVMKKDG-SQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             T        + V   DG    R+L    ED  + A   SP G  +  +    G    +L
Sbjct: 983  ATS----GPNVKVWPADGRGAPRVLPSGYEDRAIAAIAVSPDGSHVAIAALDGG---VRL 1035

Query: 419  YSIDLNGRNETLINTPAYAS 438
              +D  G+   L    A   
Sbjct: 1036 LRVDGQGQPVLLSGLGAAVR 1055



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/250 (19%), Positives = 94/250 (37%), Gaps = 18/250 (7%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + +  I  ++ V+  DG             +     SP   ++  AT D     R+   
Sbjct: 687 RIFATAISGTVHVVRADGHGAPAALKGHGPGVESADTSPVDDRIVLATGD--GTARILGA 744

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    R P  +      +    FS++G  A+++   D    ++  D +  A   L     
Sbjct: 745 D---RREPVVLRGHEGAVRGAAFSADGG-AVVTASADGTARVFRADGK-GAPVVLEGHEG 799

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +  SA++S D + +V  +  +G  +++ +   G  + R+ +  E        S  G  IA
Sbjct: 800 VVNSAAFSRDGASVV-TASEDGTARVWRL--GGPGEPRLLRGHEGPLTGIAVSHDGSRIA 856

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYS 420
               +G      V + DGS E +++        +  +SP G  L+       D  ++++ 
Sbjct: 857 ---TAGTDKTARVFRADGSGEPVVLRGHAEHLLSVDFSPDGSRLV---TGSADKTARIWR 910

Query: 421 IDLNGRNETL 430
            D  G+   L
Sbjct: 911 ADGRGQPIVL 920



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 86/250 (34%), Gaps = 14/250 (5%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VV+     +  V   DG     +    + ++    FS +   V  A+ D        +  
Sbjct: 771  VVTASADGTARVFRADGKGAPVVLEGHEGVVNSAAFSRDGASVVTASEDG----TARVWR 826

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  P+ +      +     S +G R   +   D+   ++  D  S     L      
Sbjct: 827  LGGPGEPRLLRGHEGPLTGIAVSHDGSRIATAGT-DKTARVFRAD-GSGEPVVLRGHAEH 884

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +S  +SPD S++V  S     +   + +++G  Q  +    +       +SP+G  I  
Sbjct: 885  LLSVDFSPDGSRLVTGS---ADKTARIWRADGRGQPIVLGVHDDRVVGVAFSPEGTRIVT 941

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            T ++G    +      G    L  E + L    +SP G+ ++ +         K++  D 
Sbjct: 942  TSWNG-ILRVFEDGVPGEPVVLRDERAGLLRAAFSPDGQHIVATS----GPNVKVWPADG 996

Query: 424  NGRNETLINT 433
             G    L + 
Sbjct: 997  RGAPRVLPSG 1006



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 86/247 (34%), Gaps = 15/247 (6%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             +V+G    +  +   DG     +    D  +    FSP   ++   +++   ILRV+  
Sbjct: 896  RLVTGSADKTARIWRADGRGQPIVLGVHDDRVVGVAFSPEGTRIVTTSWN--GILRVF-- 951

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            +  +   P  + + R+ +L   FS +G+  + +       ++           R+  + +
Sbjct: 952  EDGVPGEPVVLRDERAGLLRAAFSPDGQHIVATS----GPNVKVWPADGRGAPRVLPSGY 1007

Query: 303  IN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             +    + + SPD S +   +   G   + +++ +G  Q  +     A+     +S    
Sbjct: 1008 EDRAIAAIAVSPDGSHVAIAALDGG---VRLLRVDGQGQPVLLSGLGAAVRTVAFSSDSA 1064

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             +      G    + V    G    L  E   L    +SP    ++ +          + 
Sbjct: 1065 RLVAVSSDGIARVLPV-DGQGEAITLRAEGVTLTDAVFSPDATRVVTAANDGAARVFSIA 1123

Query: 420  SIDLNGR 426
            +  L  R
Sbjct: 1124 AESLMAR 1130



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 83/248 (33%), Gaps = 14/248 (5%)

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV---SESVVSGIIKNS 192
            + ++  +  S     R++A   + +  + +                 S       +  +
Sbjct: 468 ERALLRAQQESRENDARRLAAQSAKERAEGLLPRARLLAVEAALAARASGRPAGPAVVQA 527

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L       A  + +       +    FSP+ + VA A+ D     R++ +  R +    R
Sbjct: 528 LGDAVWGPAVDQEVLVGHGGAVHHAAFSPDGRLVATASAD--GAARIFRLGGRDEPLVLR 585

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                  ++A  F+ +G     +   D A+ ++  D   +    L        S ++SPD
Sbjct: 586 AAT-PGGVVAVAFNHDGSLLA-TASTDGAVRLWRPD--GHEVRALGTRDAAPTSVAFSPD 641

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            S++V  +   G            +   +    E      V+S  G  I  T  SG    
Sbjct: 642 GSRVV--AGTTGGAIYVWRPGMEGEPPLVVPLGERLIRRAVFSHDGARIFATAISGT--- 696

Query: 373 IGVMKKDG 380
           + V++ DG
Sbjct: 697 VHVVRADG 704



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 13/140 (9%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWS 355
           L         A++SPD  ++V  +  +G  +++ +   G D+  + +           ++
Sbjct: 542 LVGHGGAVHHAAFSPDG-RLVATASADGAARIFRL--GGRDEPLVLRAATPGGVVAVAFN 598

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             G L+A     G   A+ + + DG + R L   D+   +  +SP G  ++      G T
Sbjct: 599 HDGSLLATASTDG---AVRLWRPDGHEVRALGTRDAAPTSVAFSPDGSRVV-----AGTT 650

Query: 415 GSKLYSIDLNGRNETLINTP 434
           G  +Y        E  +  P
Sbjct: 651 GGAIYVWRPGMEGEPPLVVP 670


>gi|284038147|ref|YP_003388077.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
 gi|283817440|gb|ADB39278.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
          Length = 709

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 99/311 (31%), Gaps = 42/311 (13%)

Query: 157 TISDD----IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +ISDD    +Y        +++  +   + S  +   K  +  +   G   + +    D 
Sbjct: 85  SISDDGKWVVYVRGGDHGSNWDDELPVNTLSSPTP-PKVQIWTVPFAGGEPKAIAEG-DA 142

Query: 213 ILFEPRFSPNQ-QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +  P   P    ++A+         +V++       A K +   R    + ++S +G +
Sbjct: 143 PVISPTNDPGTPARIAFI-----KGGQVWVSPIDGSTAAKALFTARGTNSSLQWSPDGSK 197

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--REGKEQ-- 327
                 + +   +     ++     +  +   + S  +SPD  ++VF       G     
Sbjct: 198 LAFVCDRKDHAFLGVFTNETTPITWIAPSFSQDDSPRWSPDGKRLVFVRTPGSGGAPDSI 257

Query: 328 ---------LYVMQSNGSDQKRI---------SQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                    ++          +I         SQ      F+  W+  GD I F  +   
Sbjct: 258 LTRKHRPWSIWTADVASGTASQIWQAPKTLAGSQPTTHGGFNLHWAA-GDRIVFLSYQDG 316

Query: 370 KFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              +  +   G    LL       +  T +   + L+FS     D       +D++ R+ 
Sbjct: 317 WPHLYSIASSGGAPLLLTPAPFMAEHITLTHDRKWLLFSGNTGPDK------LDIDRRHV 370

Query: 429 TLINTPAYASD 439
             +     A +
Sbjct: 371 VRVPVDKAAME 381



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/211 (21%), Positives = 73/211 (34%), Gaps = 50/211 (23%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN----ISASYSPDSSQIVFESDREG 324
           G R   +  +    +IY  +    A  +LTN    +     S S S D   +V+   R G
Sbjct: 42  GSRIAWAFAEQGKRNIYVAEGPDFAPRKLTNYTDDDGQELTSLSISDDGKWVVYV--RGG 99

Query: 325 ---------------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD---- 359
                                K Q++ +   G + K I++        PV SP  D    
Sbjct: 100 DHGSNWDDELPVNTLSSPTPPKVQIWTVPFAGGEPKAIAEGD-----APVISPTNDPGTP 154

Query: 360 -LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             IAF K  G +  +  +    + + L        +  WSP G  L F   +       +
Sbjct: 155 ARIAFIK--GGQVWVSPIDGSTAAKALFTARGTNSSLQWSPDGSKLAFVCDRKDHAFLGV 212

Query: 419 YSIDLNGRNETLINT---PAYASD--PQWVG 444
           ++      NET   T   P+++ D  P+W  
Sbjct: 213 FT------NETTPITWIAPSFSQDDSPRWSP 237


>gi|284042934|ref|YP_003393274.1| hypothetical protein Cwoe_1471 [Conexibacter woesei DSM 14684]
 gi|283947155|gb|ADB49899.1| hypothetical protein Cwoe_1471 [Conexibacter woesei DSM 14684]
          Length = 311

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 104/278 (37%), Gaps = 48/278 (17%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             LCV+D     +  +        +     +PN + +A+A        R++    R   A
Sbjct: 52  RDLCVVDPATRRVTRVARGSAGAPYRGVSATPNGRTIAFA-----RGTRIFRAGPRGADA 106

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--------------ATE 295
            +         + P  S +G+    +V     + +   D                     
Sbjct: 107 RQV-----GGGMTPLVSPDGR----AVTWRGEIQVQQCDPFGGCAQVQTFALFRRANGEA 157

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPV 353
           R T     + S+++    +++V ++ R G   +++ ++  +G   + ++ D   SY  P 
Sbjct: 158 RPTVVEAYSYSSAWW--GTRLVSQNTRRGAEADEISLLDGDGRPVRSLTNDPARSYTSPA 215

Query: 354 WSPQGDLIAFTK---FSGE-----KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSL 404
            SP G L+A       +G+     K  + +   D G++ R+L E +    P++SP GR L
Sbjct: 216 LSPDGSLLAAISEPLPTGDADPTFKGRVELFDPDTGARVRVLTESATDDVPSFSPDGRQL 275

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            F+R +D      LY +   G     +      S P W
Sbjct: 276 AFNRGRD------LYVVATRGGRARRVAANFVLSGPSW 307



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 75/227 (33%), Gaps = 31/227 (13%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-------DDEDILRVYLMD 243
             +      GA+ R +          P  SP+ + V +                +V    
Sbjct: 94  TRIFRAGPRGADARQVGGG-----MTPLVSPDGRAVTWRGEIQVQQCDPFGGCAQVQTFA 148

Query: 244 T-RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNT 300
             R      R     +   +  +   G R +    +  A   +I  +D        LTN 
Sbjct: 149 LFRRANGEARPTVVEAYSYSSAWW--GTRLVSQNTRRGAEADEISLLDGDGRPVRSLTND 206

Query: 301 LFIN-ISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              +  S + SPD S +   S        D   K ++ +   +   + R+  +  A+   
Sbjct: 207 PARSYTSPALSPDGSLLAAISEPLPTGDADPTFKGRVELFDPDTGARVRVLTES-ATDDV 265

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           P +SP G  +AF +       + V+   G + R +  +  L  P+W+
Sbjct: 266 PSFSPDGRQLAFNRGRD----LYVVATRGGRARRVAANFVLSGPSWA 308



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 66/177 (37%), Gaps = 15/177 (8%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G     + A +R+        + ++ +     + +R+  VS++   G   + + ++D DG
Sbjct: 140 GCAQVQTFALFRRANGEARPTVVEAYSYSSAWWGTRL--VSQNTRRGAEADEISLLDGDG 197

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRI 253
             +R LT    +    P  SP+   +A  +              RV L D       + +
Sbjct: 198 RPVRSLTNDPARSYTSPALSPDGSLLAAISEPLPTGDADPTFKGRVELFDPDTGARVRVL 257

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
               +  + P FS +G++       +   D+Y V  +     R+    F+    S++
Sbjct: 258 TESATDDV-PSFSPDGRQLAF----NRGRDLYVVATRGGRARRV-AANFVLSGPSWA 308


>gi|158337728|ref|YP_001518904.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158307969|gb|ABW29586.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1167

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 97/249 (38%), Gaps = 26/249 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R         +    FSP+ Q +A A+ D     R++ +     +    +   +  +  
Sbjct: 559 ERNRLEGHAATVNSISFSPDGQSMATASRD--GTARLWNLQ---GQTQTILTGHQGDVYN 613

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESD 321
             FS +G+R   +  +D  + +++   +S  T R+           S+S D + I   S 
Sbjct: 614 IAFSPDGQRLA-TASQDRTIRLWT---RSGQTVRILQGHQGDIYDLSWSGDGNYIASAS- 668

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           ++G   ++     G+ + R  Q ++ S +    SP    IA T   G    + +    G 
Sbjct: 669 KDGTAIVF--DRQGNQRVRFQQHQD-SIYAISISPDSQKIATTSRDGT---LRIWTPTGK 722

Query: 382 QERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-----GRNETLINTPA 435
           Q  +L      +   ++SP G+ L+       D   +L+SI  N       ++  +   +
Sbjct: 723 QLLVLKGHQGAIYDVSFSPDGQQLV---TAGADQTVRLWSIQGNPIKIFRGHQGAVYDVS 779

Query: 436 YASDPQWVG 444
           +++  QW+ 
Sbjct: 780 FSATGQWLA 788



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/327 (16%), Positives = 118/327 (36%), Gaps = 26/327 (7%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGA-QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           N IS     Q +         + WN  G  Q ++TG       D   + F      D ++
Sbjct: 571 NSISFSPDGQSMATASRDGTARLWNLQGQTQTILTGH----QGDVYNIAFS----PDGQR 622

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           +       +   W +     S    + + G +GD          + ++   K+   ++  
Sbjct: 623 LATASQDRTIRLWTR-----SGQTVRILQGHQGDIYDLSWSGDGNYIASASKDGTAIVFD 677

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
              N R         ++    SP+ QK+A  + D    LR++   T   +    +   + 
Sbjct: 678 RQGNQRVRFQQHQDSIYAISISPDSQKIATTSRD--GTLRIW---TPTGKQLLVLKGHQG 732

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            I    FS +G++ + +   D+ + ++S+  Q N  +            S+S     +  
Sbjct: 733 AIYDVSFSPDGQQLV-TAGADQTVRLWSI--QGNPIKIFRGHQGAVYDVSFSATGQWLAS 789

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S   G + + +   +G    ++ +  + + +   +SPQG+L+A T    +   I  ++ 
Sbjct: 790 AS---GDKTIRLWDQSG-QALQVLRGHQGAVYSAQFSPQGNLLATTSNDEDSAHIWQVRS 845

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLI 405
               ++       + + ++S     LI
Sbjct: 846 AWLAQQQRQLQGRISSLSFSIDSPDLI 872



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 10/135 (7%)

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                  +      +   RFS +G + L++  +D    +++  L  N   +L +       
Sbjct: 968  GEQQALLKGHTGAVYTVRFSPDG-QLLMTTSEDGTARLWT--LTGNLIAQLPDHQGAVYD 1024

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              +SPD   +   +  +G+ +L+  Q     Q    ++  +S +   +SP G  IA    
Sbjct: 1025 GRFSPDGQTLA-TASEDGQIRLWTRQ---GQQISAFRNYPSSVYRLRFSPNGQRIATGST 1080

Query: 367  SGEKFAIGVMKKDGS 381
             G    I +    G+
Sbjct: 1081 DG---NIQLWDLQGN 1092



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 52/144 (36%), Gaps = 10/144 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +     ++ + +  G   + L       ++  RFSP+ Q +   + D    L      T 
Sbjct: 954  TASRDETVKLWNYKGE-QQALLKGHTGAVYTVRFSPDGQLLMTTSEDGTARLW-----TL 1007

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  ++ + +  +   RFS +G+    +  +D  + +++   Q        N      
Sbjct: 1008 TGNLIAQLPDHQGAVYDGRFSPDGQTLA-TASEDGQIRLWT--RQGQQISAFRNYPSSVY 1064

Query: 306  SASYSPDSSQIVFESDREGKEQLY 329
               +SP+  +I      +G  QL+
Sbjct: 1065 RLRFSPNGQRIA-TGSTDGNIQLW 1087



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 55/377 (14%), Positives = 125/377 (33%), Gaps = 63/377 (16%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
            IS     QKI         + W   G Q+LV   +         V F      D +Q++ 
Sbjct: 696  ISISPDSQKIATTSRDGTLRIWTPTGKQLLV---LKGHQGAIYDVSFS----PDGQQLVT 748

Query: 142  KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
                 +   W    + I   I++    +   ++       + + S     ++ + D+ G 
Sbjct: 749  AGADQTVRLWSIQGNPI--KIFRG--HQGAVYDVSFSATGQWLASASGDKTIRLWDQSGQ 804

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             ++ +       ++  +FSP    +A  + D ED   ++ + +      +R    +  I 
Sbjct: 805  ALQ-VLRGHQGAVYSAQFSPQGNLLATTSND-EDSAHIWQVRSAWLAQQQR--QLQGRIS 860

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            +  FS +    + + +K     +   +   +  +RL + +    S S+      +V  + 
Sbjct: 861  SLSFSIDSPDLITAWEKG---SLSIGNPTQSTFKRLNSQVKAVTSLSFQAHQQLLV-AAT 916

Query: 322  REGKEQLYVMQSN-------------------------------------GSDQKRISQD 344
            ++G   LY    +                                       +Q+ + + 
Sbjct: 917  KQGTVHLYKKDQSLQTFPAHKDTIYNIQLNPQKNLIATASRDETVKLWNYKGEQQALLKG 976

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRS 403
               + +   +SP G L+  T   G      +    G+    L +    +    +SP G++
Sbjct: 977  HTGAVYTVRFSPDGQLLMTTSEDGTA---RLWTLTGNLIAQLPDHQGAVYDGRFSPDGQT 1033

Query: 404  LIFSRKKDGDTGSKLYS 420
            L  + +   D   +L++
Sbjct: 1034 LATASE---DGQIRLWT 1047



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 73/203 (35%), Gaps = 30/203 (14%)

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                 +  + +Y  D  +   P       ++ L P+     K  + +  +DE + ++  +
Sbjct: 913  VAATKQGTVHLYKKDQSLQTFPAHKDTIYNIQLNPQ-----KNLIATASRDETVKLW--N 965

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             +      L        +  +SPD   ++  S+ +G  +L+ +     +      D + +
Sbjct: 966  YKGEQQALLKGHTGAVYTVRFSPDGQLLMTTSE-DGTARLWTL---TGNLIAQLPDHQGA 1021

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT------WSPSGR 402
             +D  +SP G  +A     G    I +  + G Q       +    P+      +SP+G+
Sbjct: 1022 VYDGRFSPDGQTLATASEDG---QIRLWTRQGQQI-----SAFRNYPSSVYRLRFSPNGQ 1073

Query: 403  SLIFSRKKDGDTGSKLYSIDLNG 425
             +       G T   +   DL G
Sbjct: 1074 RIA-----TGSTDGNIQLWDLQG 1091


>gi|125601237|gb|EAZ40813.1| hypothetical protein OsJ_25290 [Oryza sativa Japonica Group]
          Length = 594

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 48/312 (15%), Positives = 98/312 (31%), Gaps = 55/312 (17%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD---- 232
           I   +           L  ++ +  +      + +   + P FSP+  +V Y  +     
Sbjct: 259 IAVATRRKGRAQRHVELFDLETESFSPLTERLNPELHHYNPFFSPSGDRVGYHRFRGAGA 318

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             D +  YL   +   +  R+         P FS +     ++    +   +  +     
Sbjct: 319 RGDSVVPYLQPVQSPVSSLRMLRVYG--TFPSFSPDAAHLAMNGDFFKTPGVTILRSDGA 376

Query: 293 ATERLTNTLFINISASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQ-------- 338
               LT    +  + S+SP  S ++F S        +   ++  ++ +  +         
Sbjct: 377 KRWVLTREPNLFYT-SWSPAESGVIFTSMGPIFETTKATVRIARLEFDAGELTTGRDEVA 435

Query: 339 ---KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--------- 386
              K +++ +  +   P  SP G  + F         I +++ DGS  R +         
Sbjct: 436 ATLKVLTRPEAGNDAFPAVSPCGKWVVF--------RIYLVRPDGSGLRRVHVAGPAGSA 487

Query: 387 -VEDSNLQAPTWSPSGRSLIFSRKKDG------------DTGSKLYSIDLNGRNETLINT 433
             +   +    +SP  R L+F+    G                 LY   L+G     +  
Sbjct: 488 AADRERINHVCFSPDSRWLLFTANFGGVMAEPISAPNQFQPYGDLYVCRLDGSGLVRLTC 547

Query: 434 PAY-ASDPQWVG 444
            AY    P W  
Sbjct: 548 NAYENGTPAWGP 559



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 75/209 (35%), Gaps = 17/209 (8%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMD-----TRIDRAPKRIGNFRSMILAPR---FSS 267
            P +      V +    D+    V+ +D            +R+         P       
Sbjct: 196 WPTWHGEGT-VFFHRVADDGWWSVFRVDVSPETLEPTGGERRVTPPGLHCFTPAAVGRGG 254

Query: 268 NGKRALISVQKDEAMDIYS--VDLQSNATERLT---NTLFINISASYSPDSSQIVFESDR 322
            G+   ++ ++      +    DL++ +   LT   N    + +  +SP   ++ +   R
Sbjct: 255 GGRWIAVATRRKGRAQRHVELFDLETESFSPLTERLNPELHHYNPFFSPSGDRVGYHRFR 314

Query: 323 E-GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             G     V+      Q  +S  +    +   P +SP    +A      +   + +++ D
Sbjct: 315 GAGARGDSVVPYLQPVQSPVSSLRMLRVYGTFPSFSPDAAHLAMNGDFFKTPGVTILRSD 374

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           G++  +L  + NL   +WSP+   +IF+ 
Sbjct: 375 GAKRWVLTREPNLFYTSWSPAESGVIFTS 403



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 42/139 (30%), Gaps = 31/139 (22%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSM 259
           A ++ LT         P  SP  + V +         R+YL+        +  +      
Sbjct: 436 ATLKVLTRPEAGNDAFPAVSPCGKWVVF---------RIYLVRPDGSGLRRVHVAGPAGS 486

Query: 260 ILAPR-------FSSNGKRALISVQKDE--------------AMDIYSVDLQSNATERLT 298
             A R       FS + +  L +                     D+Y   L  +   RLT
Sbjct: 487 AAADRERINHVCFSPDSRWLLFTANFGGVMAEPISAPNQFQPYGDLYVCRLDGSGLVRLT 546

Query: 299 NTLFINISASYSPDSSQIV 317
              + N + ++ P SS   
Sbjct: 547 CNAYENGTPAWGPASSPAA 565



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 9/128 (7%)

Query: 293 ATERLTNTLFINISASYSPDSSQ-IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           A  R T+ + +N +A +  D  + + F S+R G   L+  +     +       E S F 
Sbjct: 35  AERRHTDGVSVNFNAQFVDDGGEEVAFVSERGGAAGLFRCRPGPEQRAEPLPTVEGSLFH 94

Query: 352 PVWSPQGDLIAFTK---FSGEKFAIG--VMKKD-GSQERLLVEDSN--LQAPTWSPSGRS 403
              + +G  + F          F     V   + GS+E + V        +P  S SG  
Sbjct: 95  DRPTVRGGRLYFVSAHEQPPAPFRSWAAVYATEIGSKETVRVSPPGVVDMSPAVSDSGEL 154

Query: 404 LIFSRKKD 411
           +  +   D
Sbjct: 155 VAVASYGD 162


>gi|225873085|ref|YP_002754544.1| peptidase, S9C (acylaminoacyl-peptidase) family [Acidobacterium
           capsulatum ATCC 51196]
 gi|225791490|gb|ACO31580.1| peptidase, S9C (acylaminoacyl-peptidase) family [Acidobacterium
           capsulatum ATCC 51196]
          Length = 669

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 57/330 (17%), Positives = 108/330 (32%), Gaps = 48/330 (14%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS---RILFVSESVVSGIIKNSLCV 195
           +    F  +P   R I H I  D  Q  T       S   + L  +E   +G       V
Sbjct: 14  LASGAFAQAPDHAR-INHLI--DALQQTTAVSETALSPNGQSLVWAEGGRNGAHLKVASV 70

Query: 196 MDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRI 253
            D  GA +    P        +  +SP+ +++A+ +    +    V++ +      PK +
Sbjct: 71  ADPAGARVITACPAGNSGRESDAVWSPDSKQIAFFSNCTPDHKPGVFVAEADGSGTPKLL 130

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                   +  +S NG+       K     + ++                  + S +P  
Sbjct: 131 AELDGYAHSLAWSPNGQELSFIYVKGSEGPVNAL------------------APSPAPSG 172

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-- 371
              V   +    +++  + + G +  +I+      Y +  WSP    + +          
Sbjct: 173 ---VIGVEHIQDQRVATVSAKGGEVAQITPASLYVY-EFEWSPDAQKLVYVAAPPPGDDN 228

Query: 372 ----AIGVMKKDGSQERLL--------VEDSNLQAPTWSPSGRSLIF---SRKKDGDTGS 416
                +       +   +L        +    +  P WSP G+ + F        G TG 
Sbjct: 229 WWTAEMYTQAIGEAPHVVLDPNTVSGALHGLQIAVPRWSPDGKQIAFIGGLMSDQGVTGG 288

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            +Y I  +G     I TP  AS P W+ ++
Sbjct: 289 DIYLIPASGGQPKDI-TPGIASTPTWLHWL 317


>gi|298244291|ref|ZP_06968097.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297551772|gb|EFH85637.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 654

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 80/268 (29%), Gaps = 25/268 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS     +L V D      R+        +     SP+ + +  A+ D      + +  T
Sbjct: 179 VSASDDRTLKVWDALTGAERHTLSGHTNWVTACAISPDGKWIISASADQ----TLKVWHT 234

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
                   +    S +     SS+G   + S   D  + ++     +      L      
Sbjct: 235 HTGELQHTLSGHTSRVNGCAISSDGTWIV-SASADRTLKVW--HTHTGELRHTLHGHTGS 291

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               + SPD + IV  SD    + L V  +    ++               SP G  I  
Sbjct: 292 VNGCAISPDGTWIVSASD---DQTLKVWDALTGAERHTFHGHTGPVNGCAISPDGKWIVS 348

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    + V       ER         +     SP G  ++ +     D   K++ +
Sbjct: 349 ASADTT---LKVWDVLTGAERHTFHGHTGLVNGCAISPDGTWIVSASY---DQTLKVWDV 402

Query: 422 DLNGRNETL------INTPAYASDPQWV 443
                  TL      +N  A + D +W+
Sbjct: 403 LTGAERHTLHGHTGPVNGCAISPDGKWI 430



 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 93/300 (31%), Gaps = 24/300 (8%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           K+ HT + ++  ++ G  G  N   +    + +VS     +L V D      R+      
Sbjct: 272 KVWHTHTGELRHTLHGHTGSVNGCAISPDGTWIVSASDDQTLKVWDALTGAERHTFHGHT 331

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +     SP+ + +  A+ D      + + D               ++     S +G  
Sbjct: 332 GPVNGCAISPDGKWIVSASADT----TLKVWDVLTGAERHTFHGHTGLVNGCAISPDGTW 387

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            + S   D+ + ++ V L       L          + SPD   IV  S     + L V 
Sbjct: 388 IV-SASYDQTLKVWDV-LTGAERHTLHGHTGPVNGCAISPDGKWIVSASY---DQTLKVW 442

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            +    ++       +  +    SP G  I           + V       ER       
Sbjct: 443 GALTGAERHTFHGHTSWVYTCAISPDGTWIVSASLDTT---LKVWDVLTGAERHTFHGHT 499

Query: 392 LQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWV 443
               A   SP G  ++ +     D   K++         TL      +   A + D +W+
Sbjct: 500 DTVTACAISPDGTWIVSASD---DETLKVWDALTGAERHTLSGHTNWVTACAISPDGKWI 556



 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 76/242 (31%), Gaps = 21/242 (8%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS     +L V D      R+        +     SP+ + +  A+YD      + +   
Sbjct: 389 VSASYDQTLKVWDVLTGAERHTLHGHTGPVNGCAISPDGKWIVSASYDQ----TLKVWGA 444

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                        S +     S +G   + S   D  + ++  D+ + A    T     +
Sbjct: 445 LTGAERHTFHGHTSWVYTCAISPDGTWIV-SASLDTTLKVW--DVLTGAERH-TFHGHTD 500

Query: 305 I--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              + + SPD + IV  SD    E L V  +    ++               SP G  I 
Sbjct: 501 TVTACAISPDGTWIVSASD---DETLKVWDALTGAERHTLSGHTNWVTACAISPDGKWII 557

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYS 420
                     + V       ER  +            SP G+ ++ + +   D   K++ 
Sbjct: 558 SASADQT---LKVWDVLTRAERYTLHGHTNWVRGCVISPDGKWIVSASE---DKTLKVWD 611

Query: 421 ID 422
           ++
Sbjct: 612 LN 613



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 78/268 (29%), Gaps = 25/268 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS     +L V       +R+        +     SP+   +  A+ D      + + D 
Sbjct: 263 VSASADRTLKVWHTHTGELRHTLHGHTGSVNGCAISPDGTWIVSASDDQ----TLKVWDA 318

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFI 303
                          +     S +GK  + S   D  + ++  D+ + A     +    +
Sbjct: 319 LTGAERHTFHGHTGPVNGCAISPDGKWIV-SASADTTLKVW--DVLTGAERHTFHGHTGL 375

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               + SPD + IV  S     + L V       ++               SP G  I  
Sbjct: 376 VNGCAISPDGTWIVSASY---DQTLKVWDVLTGAERHTLHGHTGPVNGCAISPDGKWIVS 432

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
             +      + V       ER           T   SP G  ++ +     DT  K++ +
Sbjct: 433 ASYDQT---LKVWGALTGAERHTFHGHTSWVYTCAISPDGTWIVSASL---DTTLKVWDV 486

Query: 422 DLNGRNETL------INTPAYASDPQWV 443
                  T       +   A + D  W+
Sbjct: 487 LTGAERHTFHGHTDTVTACAISPDGTWI 514



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 76/237 (32%), Gaps = 29/237 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +  A+ D      + + D         +    + + A   S +GK   IS  
Sbjct: 170 AISPDGTWIVSASDDR----TLKVWDALTGAERHTLSGHTNWVTACAISPDGKWI-ISAS 224

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNG 335
            D+ + ++     +   +  L+         + S D + IV  S DR     L V  ++ 
Sbjct: 225 ADQTLKVW--HTHTGELQHTLSGHTSRVNGCAISSDGTWIVSASADRT----LKVWHTHT 278

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQ 393
            + +        S      SP G  I           + V       ER         + 
Sbjct: 279 GELRHTLHGHTGSVNGCAISPDGTWIVSASDDQT---LKVWDALTGAERHTFHGHTGPVN 335

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-------LINTPAYASDPQWV 443
               SP G+ ++       DT  K++ + L G           L+N  A + D  W+
Sbjct: 336 GCAISPDGKWIV---SASADTTLKVWDV-LTGAERHTFHGHTGLVNGCAISPDGTWI 388



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 36/121 (29%), Gaps = 16/121 (13%)

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           +   S   R  +    +      SP G  I           + V       ER  +    
Sbjct: 149 RIESSTLLRTLRGHTDTVNACAISPDGTWIVSASDDRT---LKVWDALTGAERHTLSGHT 205

Query: 392 LQ--APTWSPSGRSLIFSRKKDGDTGSKLYSI-------DLNGRNETLINTPAYASDPQW 442
               A   SP G+ +I       D   K++          L+G     +N  A +SD  W
Sbjct: 206 NWVTACAISPDGKWII---SASADQTLKVWHTHTGELQHTLSGHTSR-VNGCAISSDGTW 261

Query: 443 V 443
           +
Sbjct: 262 I 262


>gi|296269459|ref|YP_003652091.1| pentapeptide repeat-containing protein [Thermobispora bispora DSM
            43833]
 gi|296092246|gb|ADG88198.1| pentapeptide repeat protein [Thermobispora bispora DSM 43833]
          Length = 1807

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 99/279 (35%), Gaps = 38/279 (13%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWD    + +                H  +  IY       G+     LFV+     G 
Sbjct: 1360 RLWDPHTGQLMGTLS-----------GHEGA--IYHVAFSPSGE-----LFVT-----GD 1396

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             +  + V    G  +  L+  R  + +   F P   ++  ++ D      + L D R  R
Sbjct: 1397 SEGVVRVWSASGEQLAELSGHRGSV-WPFAFHPKGHRLVTSSSDG----MIRLWDPRTGR 1451

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISA 307
              + +      I +  FS++G+        D  + ++  D Q+    R  T T     SA
Sbjct: 1452 CRRVLRGHGRRINSVAFSADGRMLAACGS-DGYVRLW--DPQTGRRIRSFTGTGDRLESA 1508

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +SP  S +   S+  G   +Y+         R         +   ++P G  +A T   
Sbjct: 1509 VFSPAGSLLATTSNDGG---VYLWDPTSDGYARELNVDTDHVWAQAFTPDGTRLA-TAND 1564

Query: 368  GEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
             +   +   +  G QE  L E    +++  +SP GR ++
Sbjct: 1565 DDSVRVW-HRASGRQELHLTEHRGRVRSIAFSPDGRLIV 1602



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 86/261 (32%), Gaps = 19/261 (7%)

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFS 220
            + +    G   + + F ++  +     +   V   D   G  IR  T + D++     FS
Sbjct: 1453 RRVLRGHGRRINSVAFSADGRMLAACGSDGYVRLWDPQTGRRIRSFTGTGDRLESA-VFS 1511

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P    +A  + D      VYL D   D   + +      + A  F+ +G R   +   D+
Sbjct: 1512 PAGSLLATTSNDGG----VYLWDPTSDGYARELNVDTDHVWAQAFTPDGTRLA-TANDDD 1566

Query: 281  AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQK 339
            ++ ++           LT       S ++SPD   IV    DR     + +      +  
Sbjct: 1567 SVRVW-HRASGRQELHLTEHRGRVRSIAFSPDGRLIVTGCDDR----IVRLWDMVTGECT 1621

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                  +   +   + P G+L+A     G    +  +        L      L    +SP
Sbjct: 1622 ATLSGHKDRVYAVAFHPSGELVASASNDGTA-RLWRVPSGDCLHVLEHGGGRLWTAAFSP 1680

Query: 400  SGRSLIFSRKKDGDTGSKLYS 420
             G  L        D   +L+ 
Sbjct: 1681 DGNLLA---TAGDDLAIRLWD 1698



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 51/271 (18%), Positives = 100/271 (36%), Gaps = 26/271 (9%)

Query: 178  LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +F+   +++G    ++ V D     +R+        L+    SP ++ +A       D  
Sbjct: 1260 VFLRGRLITGDADGTIRVWDLSTGKVRHELRGHSGALYRLVLSPERRLLA-----AGDGQ 1314

Query: 238  RVY-LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-E 295
             V  L D        R+      I A  F  +G  AL+S   +  + ++  D  +     
Sbjct: 1315 GVLCLWDPYTGELLHRLTGHPGGICAIAFHPDG-HALVSGDTEGTVRLW--DPHTGQLMG 1371

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             L+         ++SP     V   D EG  +++   ++G     +S     S +   + 
Sbjct: 1372 TLSGHEGAIYHVAFSPSGELFV-TGDSEGVVRVW--SASGEQLAELS-GHRGSVWPFAFH 1427

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI------FS 407
            P+G  +  +   G    I +      + R ++      + +  +S  GR L       + 
Sbjct: 1428 PKGHRLVTSSSDG---MIRLWDPRTGRCRRVLRGHGRRINSVAFSADGRMLAACGSDGYV 1484

Query: 408  RKKDGDTGSKLYSIDLNG-RNETLINTPAYA 437
            R  D  TG ++ S    G R E+ + +PA +
Sbjct: 1485 RLWDPQTGRRIRSFTGTGDRLESAVFSPAGS 1515


>gi|269125672|ref|YP_003299042.1| WD-40 repeat-containing protein [Thermomonospora curvata DSM 43183]
 gi|268310630|gb|ACY97004.1| WD-40 repeat protein [Thermomonospora curvata DSM 43183]
          Length = 344

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 82/250 (32%), Gaps = 22/250 (8%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +D     +          +    FSP+   +A A  D      V L      R    +  
Sbjct: 3   IDYGKLRLHATLTGHGGWIDSVVFSPDGTILATAGEDG----TVKLWQVETGRLITTLTG 58

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSS 314
            R  + +  FS +G     +  +DE + ++  D+++      LT       S ++SPD +
Sbjct: 59  HRDYVFSVAFSPDGTTLA-TASRDETVKLW--DVKTGQLITTLTEHQGWVRSVAFSPDGA 115

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +       G     + Q+         ++   + F  V+SP G  +A     G    + 
Sbjct: 116 VLA---SAGGGGTAKLWQAKTGRLITTLREHGWAVFWVVFSPDGTTLATATADG---VLE 169

Query: 375 VMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           + +    Q  +   D +        +SP G  L  S     D   KL+ +   G   T +
Sbjct: 170 LWQAKTGQL-ITTLDGHEDLVTDVAFSPDGSLLATSSH---DKTVKLWQVK-TGHLITTL 224

Query: 432 NTPAYASDPQ 441
                 S   
Sbjct: 225 TGDEDFSFGA 234



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 51/290 (17%), Positives = 103/290 (35%), Gaps = 25/290 (8%)

Query: 162 IYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           ++ ++TG  G  +S +     ++  +     ++ +   +   +          +F   FS
Sbjct: 10  LHATLTGHGGWIDSVVFSPDGTILATAGEDGTVKLWQVETGRLITTLTGHRDYVFSVAFS 69

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +A A+ D+     V L D +  +    +   +  + +  FS +G     S     
Sbjct: 70  PDGTTLATASRDE----TVKLWDVKTGQLITTLTEHQGWVRSVAFSPDGAVLA-SAGGGG 124

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              ++           L    +      +SPD + +   +  +G  +L+  Q+       
Sbjct: 125 TAKLWQA-KTGRLITTLREHGWAVFWVVFSPDGTTLA-TATADGVLELW--QAKTGQLIT 180

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWS 398
                E    D  +SP G L+A T    +   +  +K  G     L   ED +  A  +S
Sbjct: 181 TLDGHEDLVTDVAFSPDGSLLA-TSSHDKTVKLWQVKT-GHLITTLTGDEDFSFGALAFS 238

Query: 399 PSGRSLIFSRKKDGDTGSKLYSI-------DLNGRNETLINTPAYASDPQ 441
           P G +L      + D   KL+ +        L G    +I + A++ D  
Sbjct: 239 PDGTTLA---TANHDKTVKLWDVKTGHLITTLTGHRH-IIGSVAFSPDGT 284



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 92/293 (31%), Gaps = 37/293 (12%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           LWDVK  + I            R +A                 F+     ++ +   G  
Sbjct: 86  LWDVKTGQLIT--TLTEHQGWVRSVA-----------------FSPDGAVLASAGGGGTA 126

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K    +       +          +F   FSP+   +A AT D      + L   +  + 
Sbjct: 127 K----LWQAKTGRLITTLREHGWAVFWVVFSPDGTTLATATADG----VLELWQAKTGQL 178

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-S 308
              +     ++    FS +G     +   D+ + ++ V    +    LT     +  A +
Sbjct: 179 ITTLDGHEDLVTDVAFSPDGSLLA-TSSHDKTVKLWQV-KTGHLITTLTGDEDFSFGALA 236

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD + +   ++ +   +L+                        +SP G  +A T    
Sbjct: 237 FSPDGTTLA-TANHDKTVKLW--DVKTGHLITTLTGHRHIIGSVAFSPDGTTLATTS-DD 292

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +  ++       L      + +  +SP G +L  +     D  +K++ +
Sbjct: 293 ATVKLWQVETGRLITTLTEHKHTVGSVAFSPDGTTLATASD---DGTAKIWRV 342


>gi|256821999|ref|YP_003145962.1| transcriptional regulator CadC [Kangiella koreensis DSM 16069]
 gi|256795538|gb|ACV26194.1| transcriptional regulator, CadC [Kangiella koreensis DSM 16069]
          Length = 741

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 46/240 (19%), Positives = 99/240 (41%), Gaps = 20/240 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +N                +S   + + Y    + +   +      +      + N   + 
Sbjct: 386 SNSVKTVRQLVGWNRYFDWSNKGETIIY----NRNSTEIDAYHVGMGVERNIVKNVEPIS 441

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSN---ATERLT--NTLFINISASYSPDSSQ 315
             P  S       +   + + ++I +  L        + LT  ++  I+  A Y+  S +
Sbjct: 442 F-PTHSRIKDELAVVTGR-KVVNIVAESLGEGVVSEQKPLTIISSSSIDNYAEYANTSDR 499

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           IVF S R G+ Q+++  +NG++Q+  S ++        WSP  + + F      KF +  
Sbjct: 500 IVFVSRRTGEPQIWLKNTNGTEQQLTSFERNFDIRRIRWSPDDESLLFIH---NKF-LYQ 555

Query: 376 MKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +  +  + ++L E     +++  +W+ +GRS++FS  +DGD   ++Y + L   N+  I 
Sbjct: 556 LSLNNMELKVLYEAQGGESIEGESWTVNGRSVLFSSDRDGDW--QVYKLSLQSENDKAIP 613



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 98/272 (36%), Gaps = 31/272 (11%)

Query: 168 GEKGDFNSRI----LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            ++G + S I    + +  SVV  +             +      + D  + +P FSP+ 
Sbjct: 148 TKRGLWRSSIFWGLILLIVSVVGFLTVKLYFYYSMTSYSRSTPLITLDGAIRDPSFSPDG 207

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-- 281
           Q +A++            +++ +D    +I +  +  L+P +S +G++  I    ++   
Sbjct: 208 QFIAFSYRGGVQDDWDIYVESLVDGRLYQITDDITDELSPSWSPDGRKVAILRYDNQRCM 267

Query: 282 MDIYSVDL------------QSNATERLTNTLFI--NISASYSPDSSQIVFESDREGKE- 326
           +D  +V +            + +    L N   +  + S  +  +   + + S       
Sbjct: 268 IDAIAVPVSVSSTASPPSSTEESDASTLVNCSGVLQHNSVVWGKEGKYLYYTSASTKVSP 327

Query: 327 -QLYVMQSNGSDQKRISQDKEA---SYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGS 381
            Q++ +       ++++   +           SP+ + +A           I ++  + +
Sbjct: 328 LQVFRLTIKTGKTEQLTNYTQGETRGALGIKLSPENNKLAILNDVNWRNSRIDLLDLESN 387

Query: 382 Q---ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
                R LV     +   WS  G ++I++R  
Sbjct: 388 SVKTVRQLV--GWNRYFDWSNKGETIIYNRNS 417



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 61/169 (36%), Gaps = 24/169 (14%)

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRI 341
           YS+   S +T  +T    I    S+SPD   I F S R G +    +YV         +I
Sbjct: 180 YSMTSYSRSTPLITLDGAI-RDPSFSPDGQFIAF-SYRGGVQDDWDIYVESLVDGRLYQI 237

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM-----------------KKDGSQER 384
           + D       P WSP G  +A  ++  ++  I  +                 + D S   
Sbjct: 238 TDD-ITDELSPSWSPDGRKVAILRYDNQRCMIDAIAVPVSVSSTASPPSSTEESDASTLV 296

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
                    +  W   G+ L ++      +  +++ + +  G+ E L N
Sbjct: 297 NCSGVLQHNSVVWGKEGKYLYYTSASTKVSPLQVFRLTIKTGKTEQLTN 345



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 98/255 (38%), Gaps = 23/255 (9%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + RI+FVS           + + + +G   +  +  R+  +   R+SP+ + + +     
Sbjct: 497 SDRIVFVSRRTGEP----QIWLKNTNGTEQQLTSFERNFDIRRIRWSPDDESLLFIHNKF 552

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              L +  M+ ++    +   +         ++ NG+  L S  +D    +Y + LQS  
Sbjct: 553 LYQLSLNNMELKVLYEAQGGESIEGE----SWTVNGRSVLFSSDRDGDWQVYKLSLQSEN 608

Query: 294 ----TERLTNTLFINISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQK-RISQDKE 346
                ++LT       +A  SPD + I F          + Y M  + SDQ+ RI  + +
Sbjct: 609 DKAIPKQLTQKGGY--AAFESPDQAGIFFLKYHTKGLWFKTYGMAMSDSDQEIRIVDNID 666

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRS 403
              ++ ++  Q + I +      K ++       ++++     S   +P   + S     
Sbjct: 667 VFSWNSIYLRQNN-IYYLSNDYPKMSVYRYDL--AEQKRFFVQSYYGSPWLLSVSHQADK 723

Query: 404 LIFSRKKDGDTGSKL 418
           +++ R     +   L
Sbjct: 724 ILYQRNTQTQSSLVL 738



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNET 429
           +    M        L+  D  ++ P++SP G+ + FS +        +Y   L +GR   
Sbjct: 177 YFYYSMTSYSRSTPLITLDGAIRDPSFSPDGQFIAFSYRGGVQDDWDIYVESLVDGRLYQ 236

Query: 430 LINTPAYASDPQWVG 444
           + +       P W  
Sbjct: 237 ITDDITDELSPSWSP 251


>gi|242787697|ref|XP_002481069.1| platelet-activating factor acetylhydrolase isoform 1B alpha
           subunit, putative [Talaromyces stipitatus ATCC 10500]
 gi|218721216|gb|EED20635.1| platelet-activating factor acetylhydrolase isoform 1B alpha
           subunit, putative [Talaromyces stipitatus ATCC 10500]
          Length = 723

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 82/232 (35%), Gaps = 20/232 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-----GNFRSM 259
                    +    FSP+ Q V   +YD+     + L D +    P+ +           
Sbjct: 394 QTLEGHSDWVCSVAFSPDGQTVVSGSYDN----TIKLWDAKTGSEPQTLRDHLDSGHSEW 449

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVF 318
           + +  FS +G+  ++S   D  + ++  D ++ +  +        +   ++SPD   +V 
Sbjct: 450 VQSVAFSPDGQT-VVSGSYDRTIKLW--DAKTGSELQTLRGHSDWVQPVAFSPDGQTVVS 506

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S       + +  +  S + +  +          +SP G  +  +  + +   +   K 
Sbjct: 507 GSY---DNTIKLWDAKTSSELQNLRGHSGPVHSVAFSPDGQTVV-SGSNDKTIKLWDAKT 562

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
               + L    + + +  +SP  + ++       D   KL+    +   +TL
Sbjct: 563 SSELQTLRGHSNLIHSVAFSPDSQIVV---SGSNDRAIKLWDAKTSSELQTL 611



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 95/247 (38%), Gaps = 20/247 (8%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS--ESVVSGIIKNS 192
           D + ++   + ++   W     +    +   +     ++   + F    ++VVSG    +
Sbjct: 411 DGQTVVSGSYDNTIKLWDAKTGSEPQTLRDHLDSGHSEWVQSVAFSPDGQTVVSGSYDRT 470

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D    +           +    FSP+ Q V   +YD+     + L D +     + 
Sbjct: 471 IKLWDAKTGSELQTLRGHSDWVQPVAFSPDGQTVVSGSYDN----TIKLWDAKTSSELQN 526

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSP 311
           +      + +  FS +G+  ++S   D+ + ++  D ++++  + L     +  S ++SP
Sbjct: 527 LRGHSGPVHSVAFSPDGQT-VVSGSNDKTIKLW--DAKTSSELQTLRGHSNLIHSVAFSP 583

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQ------GDLIAFT 364
           DS  +V  S+      + +  +  S + +  +D   S+     S P       GD I + 
Sbjct: 584 DSQIVVSGSN---DRAIKLWDAKTSSELQTLRDHLDSFNFNQESLPDNWIALAGDNILWL 640

Query: 365 KFSGEKF 371
                +F
Sbjct: 641 PMEYRQF 647



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 74/213 (34%), Gaps = 24/213 (11%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +     + I  +  +        + +      + +  FS +G+  ++S   D  + ++  
Sbjct: 371 FLNCRPKQIHMLPQVKDDWSPGLQTLEGHSDWVCSVAFSPDGQT-VVSGSYDNTIKLW-- 427

Query: 288 DLQSNATERLTNTLFINISAS-------YSPDSSQIVFES-DREGKEQLYVMQSNGSDQK 339
           D ++ +  + T    ++   S       +SPD   +V  S DR     + +  +    + 
Sbjct: 428 DAKTGSEPQ-TLRDHLDSGHSEWVQSVAFSPDGQTVVSGSYDRT----IKLWDAKTGSEL 482

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTW 397
           +  +          +SP G  +    +      I +     S E   L      + +  +
Sbjct: 483 QTLRGHSDWVQPVAFSPDGQTVVSGSYDNT---IKLWDAKTSSELQNLRGHSGPVHSVAF 539

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           SP G++++       D   KL+    +   +TL
Sbjct: 540 SPDGQTVV---SGSNDKTIKLWDAKTSSELQTL 569


>gi|154936830|emb|CAL30200.1| NWD1 [Podospora anserina]
          Length = 1052

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 98/311 (31%), Gaps = 23/311 (7%)

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS----ESVVSGIIKN 191
            + +I + F     +W  +   +  D    +   +G   S    V     + + SG    
Sbjct: 579 ERSLIRELFKKEEPNWMILKPRMEADWNACVQTLEGHGGSVRSVVFSADGQRLASGSDDR 638

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++ + D                +    FS + Q++A  + D      V + D       +
Sbjct: 639 TVKIWDAATGACVQTLEGHGGWVSSVVFSADGQRLASGSDDR----TVKIWDAATGACVQ 694

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYS 310
            +     ++++  FS++G+R   S   D  + I+  D  + A  + L        S  +S
Sbjct: 695 TLEGHGGLVMSVVFSADGQRLA-SGSDDRTVKIW--DAATGACVQTLEGHGGWVSSVVFS 751

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D  ++   SD      + +  +      +  +         V+S  G  +A        
Sbjct: 752 ADGQRLASGSD---DRTVKIWDAATGACVQTLEGHGGLVMSVVFSADGQRLA---SGSGD 805

Query: 371 FAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             + +           +E     +++  +S  G+ L        D   K++        +
Sbjct: 806 KTVKIWDAATGACVQTLEGHGGWVRSVVFSADGQRLASGSH---DKTVKIWDAATGACVQ 862

Query: 429 TLINTPAYASD 439
           TL     +   
Sbjct: 863 TLEGHGGWVRS 873



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 63/192 (32%), Gaps = 14/192 (7%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           FSP +  +   +   +   ++    M+   +   + +      + +  FS++G+R   S 
Sbjct: 576 FSPERSLIRELFKKEEPNWMILKPRMEADWNACVQTLEGHGGSVRSVVFSADGQRLA-SG 634

Query: 277 QKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             D  + I+  D  + A  + L        S  +S D  ++   SD      + +  +  
Sbjct: 635 SDDRTVKIW--DAATGACVQTLEGHGGWVSSVVFSADGQRLASGSD---DRTVKIWDAAT 689

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQ 393
               +  +         V+S  G  +A +        I             +E     + 
Sbjct: 690 GACVQTLEGHGGLVMSVVFSADGQRLA-SGSDDRTVKIW--DAATGACVQTLEGHGGWVS 746

Query: 394 APTWSPSGRSLI 405
           +  +S  G+ L 
Sbjct: 747 SVVFSADGQRLA 758



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 48/126 (38%), Gaps = 9/126 (7%)

Query: 170 KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G +   ++F +  + + SG    ++ + D                +    FS + Q++A
Sbjct: 825 HGGWVRSVVFSADGQRLASGSHDKTVKIWDAATGACVQTLEGHGGWVRSVVFSADGQRLA 884

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D+     V + D       + +      +++  FS++G+R   S   DE + I+  
Sbjct: 885 SGSGDE----TVKIWDAATGACVQTLEGHGGWVMSVVFSADGQRLA-SGSGDETVKIW-- 937

Query: 288 DLQSNA 293
           D  +  
Sbjct: 938 DAATGK 943


>gi|284039578|ref|YP_003389508.1| hypothetical protein Slin_4731 [Spirosoma linguale DSM 74]
 gi|283818871|gb|ADB40709.1| WD40 domain protein beta Propeller [Spirosoma linguale DSM 74]
          Length = 509

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 47/296 (15%), Positives = 112/296 (37%), Gaps = 31/296 (10%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           YQ +  + GD  + + F   +V S  +     +                     P +S  
Sbjct: 161 YQVMLYKAGDITNVMSFTGLTVDSLALSG---LAYNTTYYWHVAVSDGISTTNGPVWS-- 215

Query: 223 QQKVAYATYDDEDILRV----YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            + + ++ Y      RV     L     ++ P +          P  S N ++      +
Sbjct: 216 FRTIPFSAYSYVFCRRVSGMYQLFSGNGNKLPVQQLTTEGSNWRPIVSPNRQQIAFISNR 275

Query: 279 DEAMDIYSVDLQSNATERLTNTL-----FINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +  + +Y +D   +   ++T+         ++S  +SPD +++V+ +     E LY +++
Sbjct: 276 NSELHLYLMDQDGSHVRQVTDVPIGGILGTDLSFCWSPDGTELVYPA----YENLYAVRT 331

Query: 334 NGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVE-- 388
           +G+  + +++     +F    WS Q + +      G  +   + ++   G+ ++LL+   
Sbjct: 332 DGTGLRTVAKAPTGRFFAGCDWSGQRNQLVARTTGGNLYNNELILISVSGNTQKLLLARP 391

Query: 389 DSNLQAPTWSPSGRSLIFSRK-------KDGDTGSKLYSIDL-NGRNETLINTPAY 436
            + +  P +S  G  ++F+         K     S+++ +D+  G    L   P  
Sbjct: 392 TNRIGNPVFSLDGTQILFAMDVSIFQNAKGRQLDSRIHKLDIATGVVSNLSLDPGN 447



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 105/305 (34%), Gaps = 67/305 (21%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           ++L+   +  ++  ++  +  ++WR                       +I F+S      
Sbjct: 236 YQLFS-GNGNKLPVQQLTTEGSNWR---------------PIVSPNRQQIAFISNRNS-- 277

Query: 188 IIKNSLCVMDRDGANIRYLTP----SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             +  L +MD+DG+++R +T               +SP+  ++ Y  Y++     +Y + 
Sbjct: 278 --ELHLYLMDQDGSHVRQVTDVPIGGILGTDLSFCWSPDGTELVYPAYEN-----LYAVR 330

Query: 244 TRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDE----AMDIYSVDLQSNATE--- 295
           T                 A   +S  G+R  +  +         ++  + +  N  +   
Sbjct: 331 TDGTGLRTVAKAPTGRFFAGCDWS--GQRNQLVARTTGGNLYNNELILISVSGNTQKLLL 388

Query: 296 -RLTNTLFINISASYSPDSSQIVFESD---------REGKEQLYVMQ----------SNG 335
            R TN +       +S D +QI+F  D         R+   +++ +            + 
Sbjct: 389 ARPTNRIGN---PVFSLDGTQILFAMDVSIFQNAKGRQLDSRIHKLDIATGVVSNLSLDP 445

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLVEDSNL 392
            +   IS+    +  DP +SP G  I F           +I  M  DG+   +L      
Sbjct: 446 GNLLTISKPTGTNDLDPRFSPTGGKIIFINSENTDQGSSSIMTMATDGTSRTVLFSLG-- 503

Query: 393 QAPTW 397
           + P W
Sbjct: 504 EMPFW 508


>gi|149174000|ref|ZP_01852628.1| probable TolB protein (Precursor) [Planctomyces maris DSM 8797]
 gi|148846980|gb|EDL61315.1| probable TolB protein (Precursor) [Planctomyces maris DSM 8797]
          Length = 310

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 49/279 (17%), Positives = 104/279 (37%), Gaps = 27/279 (9%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV---SESVVSGIIKNSLCVMDRD 199
           +F+ +PA     A  +    Y +        + + L             I+  + V++ D
Sbjct: 38  RFYQAPAEGGDAALFLVPGDYDTAGSPSFSADGQKLLFDGWKSQAGETSIQAKIIVVNAD 97

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G+N++ L P R      P +SP   ++A++ +    +  ++      D + + + +    
Sbjct: 98  GSNLKVLGPGR-----MPSWSPGGNRIAFSQHAPYGVAIMH-----ADGSHRTLIDAGG- 146

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSS 314
               ++S NG++   S   +   +I   DL       L     +    +  + ++SPDS 
Sbjct: 147 -WGAQWSPNGRKLAYSFPVNGRGNIRIYDLIEGTKTDLFPAGESPYTSVYWNMAWSPDSQ 205

Query: 315 QIVFESDR--EGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            + F+  R  +    +  +   G     K     + A Y D  W P G++I F   +  +
Sbjct: 206 WLCFKGCRAEDRSFDVATINIAGKQAGYKVHYHHETAPYADFAWHPVGEVIVFCPHTKPR 265

Query: 371 FAIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIF 406
             +     D +    +    E       +++P G  L+F
Sbjct: 266 QLLQFNPADANAPEPVDINFEGYLNGDVSFTPDGGQLLF 304



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 67/179 (37%), Gaps = 22/179 (12%)

Query: 260 ILAPRFSSNGKRALISVQKDEA------MDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             +P FS++G++ L    K +A        I  V+   +  + L          S+SP  
Sbjct: 61  AGSPSFSADGQKLLFDGWKSQAGETSIQAKIIVVNADGSNLKVL----GPGRMPSWSPGG 116

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           ++I F   +     + +M ++GS +  I      +     WSP G  +A++     +  I
Sbjct: 117 NRIAFS--QHAPYGVAIMHADGSHRTLIDAGGWGAQ----WSPNGRKLAYSFPVNGRGNI 170

Query: 374 GVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +       +  L         S      WSP  + L F   +  D    + +I++ G+
Sbjct: 171 RIYDLIEGTKTDLFPAGESPYTSVYWNMAWSPDSQWLCFKGCRAEDRSFDVATINIAGK 229



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 29/184 (15%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQ------LYVMQ 332
               Y    +             +   S S+S D  +++F+  +    +      + V+ 
Sbjct: 36  RDRFYQAPAEGGDAALFLVPGDYDTAGSPSFSADGQKLLFDGWKSQAGETSIQAKIIVVN 95

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           ++GS+ K +   +      P WSP G+ IAF++ +   + + +M  DGS   L+  D+  
Sbjct: 96  ADGSNLKVLGPGR-----MPSWSPGGNRIAFSQHAP--YGVAIMHADGSHRTLI--DAGG 146

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-----------AYASDPQ 441
               WSP+GR L +S   +G    ++Y + + G    L               A++ D Q
Sbjct: 147 WGAQWSPNGRKLAYSFPVNGRGNIRIYDL-IEGTKTDLFPAGESPYTSVYWNMAWSPDSQ 205

Query: 442 WVGF 445
           W+ F
Sbjct: 206 WLCF 209


>gi|125586595|gb|EAZ27259.1| hypothetical protein OsJ_11196 [Oryza sativa Japonica Group]
          Length = 744

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 123/389 (31%), Gaps = 84/389 (21%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              ++DV   +Q +     + P +       +        TG +    +RI   + S V+
Sbjct: 321 HIEIFDVASPEQPVKITQKTRPKTDHFNPFVLDGGSRIGSTGARASSFTRITVEARSSVA 380

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFE-----PRFSPNQQKVAYATYDDEDILRVYL 241
                            +  +P +D  LF      P  S +  K+A+   + + +     
Sbjct: 381 NNFH-------------KLQSPHKDVGLFRVSGVCPTISKDGSKLAFVDNEFKAVWLADS 427

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVD----LQSNATE 295
              R+    K   +  S       + +     +  S   D+ + IY++     L      
Sbjct: 428 HGLRVVYEKKGPNSVFSTAWNQNTALDTLYVCVGPSFSADKPLQIYAIHDVSALGGRQQR 487

Query: 296 RLTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVM------QSNGSDQKRISQ 343
           RLT     N   S SPD  ++VF S R+        + LYVM      +   S   R++ 
Sbjct: 488 RLTAGASNNAFPSSSPDGGRLVFRSTRDGGGGGRRHKNLYVMEDAAVGEFGTSKVTRLTS 547

Query: 344 DKEASYFDPVWSPQ--GDLIAFTKFSG--------------EKFAIGVMKKD--GSQERL 385
               +     WSP+   D I F+                    FA+ +++        R+
Sbjct: 548 -GAWTDTHCSWSPREGSDWIVFSSTRDKPAAAPADDNGLDPGYFAVFLVRASDPTVVVRV 606

Query: 386 LVE----DSNLQAPTWSPSGRSLIFSRK---------------KDGDTGSKLYSIDLN-- 424
           +        ++  P +SP GRS+  +                         ++++D++  
Sbjct: 607 VRSADSVAGHVNHPVFSPDGRSIAVTADLAAVSADPISLPLFLHSVRPYGDIFTVDIDPD 666

Query: 425 --------GRNETLINTPAYASDPQWVGF 445
                        + ++    S P W  F
Sbjct: 667 DISKNRDVRAFHRVTHSRYENSTPAWTTF 695



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 52/136 (38%), Gaps = 16/136 (11%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ------ 327
           ++ ++     +Y  +L++  T RLT     ++S + SP   ++   S  +GK        
Sbjct: 160 VAARRSPWTVVYGTNLRTGETARLTPRGTFDLSPAVSPSGKRVAVAS-WQGKPGLWDGEI 218

Query: 328 ------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 +YVM  +     R +     +   P W    D+I F +  G  + +        
Sbjct: 219 EDLRTDIYVMNVHKPPLGR-TGPVVKNAGWPTWGSD-DVIFFHRRVGTTWGVFRFSMSTG 276

Query: 382 QE-RLLVEDSNLQAPT 396
           +E R+  E+ +   P 
Sbjct: 277 EEARVTPEEFDAVTPA 292



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 12/154 (7%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-----------DEA 281
                 V            R+    +  L+P  S +GKR  ++  +           D  
Sbjct: 163 RRSPWTVVYGTNLRTGETARLTPRGTFDLSPAVSPSGKRVAVASWQGKPGLWDGEIEDLR 222

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIY +++      R    +      ++  D   I F         ++    +  ++ R+
Sbjct: 223 TDIYVMNVHKPPLGRTGPVVKNAGWPTWGSD-DVIFFHRRVGTTWGVFRFSMSTGEEARV 281

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + ++  +      S     +A  +   +   + V
Sbjct: 282 TPEEFDAVTPAAISETKVAVATIRRKSQFSDVRV 315


>gi|302528094|ref|ZP_07280436.1| predicted protein [Streptomyces sp. AA4]
 gi|302436989|gb|EFL08805.1| predicted protein [Streptomyces sp. AA4]
          Length = 633

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 77/230 (33%), Gaps = 58/230 (25%)

Query: 260 ILAPRFSSNGKRALISVQKDE-----AMDIYSVDLQSNATERLTN-TLFINISASYSPDS 313
             AP  S +G+        D      +  ++ + +    + +LT+  L  +    ++PDS
Sbjct: 58  DSAPAISPDGRWVAFLRAGDGKGAEGSPQVHVMPVDGGESRKLTSLHLGADA-PVWAPDS 116

Query: 314 SQIVFESD----------------------------------------REGKEQLYVMQS 333
             + F +                                         R+  ++L+V+ +
Sbjct: 117 RWLAFTAREAEPGRYGTEDADERTPEPAAEAPRLITRLDYRLDNIGFLRDRPKRLFVLDT 176

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIA------FTKFSGEKFAIGVMKKDGSQERLLV 387
               +      ++ S   PVW+P G+ +       F +    +  +     DG +  +L 
Sbjct: 177 FEEGEPEAVTPRDYSVSQPVWTPDGERVVVVVPHDFDRTETREHDLVAFPVDGGEPEVLT 236

Query: 388 E-DSNLQAPTWSPSGRSLIF-SRKKDG---DTGSKLYSIDLNGRNETLIN 432
                   P ++  G    F +  +DG    + + LY++  NG+   L +
Sbjct: 237 ACPGYADQPVYAADGTLYFFGTSHEDGVVVASNTGLYAVVSNGKPRRLTD 286



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 96/299 (32%), Gaps = 60/299 (20%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--------- 234
                    + VM  DG   R LT         P ++P+ + +A+   + E         
Sbjct: 78  GKGAEGSPQVHVMPVDGGESRKLTSLHLGAD-APVWAPDSRWLAFTAREAEPGRYGTEDA 136

Query: 235 ------------------------------DILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                                            R++++DT  +  P+ +      +  P 
Sbjct: 137 DERTPEPAAEAPRLITRLDYRLDNIGFLRDRPKRLFVLDTFEEGEPEAVTPRDYSVSQPV 196

Query: 265 FSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           ++ +G+R ++ V  D         D+ +  +     E LT          Y+ D +   F
Sbjct: 197 WTPDGERVVVVVPHDFDRTETREHDLVAFPVDGGEPEVLTACPGYADQPVYAADGTLYFF 256

Query: 319 -ESDREG-----KEQLYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGEK 370
             S  +G        LY + SNG   +R++  +  +         P+GD +     +   
Sbjct: 257 GTSHEDGVVVASNTGLYAVVSNG-KPRRLTDVETVDIEIGSGPAVPRGDEVLVAVRNRGA 315

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             +  +  D    +L         P+    ++  G +++ +     DT  +L  +  +G
Sbjct: 316 VELRAIPTDADGAKLDDLRVLHAGPSAVHGFAADGDTVV-AVVAGLDTAGELAVLGADG 373



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 11/86 (12%)

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSIDLNGR 426
           + AI  +   G  E    +     AP  SP GR + F R  DG   +   +++ + ++G 
Sbjct: 37  RSAIRRISLSGG-ETPWTQGPRDSAPAISPDGRWVAFLRAGDGKGAEGSPQVHVMPVDGG 95

Query: 427 NETLINT-------PAYASDPQWVGF 445
               + +       P +A D +W+ F
Sbjct: 96  ESRKLTSLHLGADAPVWAPDSRWLAF 121


>gi|289641264|ref|ZP_06473430.1| pentapeptide repeat protein [Frankia symbiont of Datisca glomerata]
 gi|289508862|gb|EFD29795.1| pentapeptide repeat protein [Frankia symbiont of Datisca glomerata]
          Length = 1600

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 50/268 (18%), Positives = 96/268 (35%), Gaps = 26/268 (9%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G I   + +    G   R +       ++   FSP+   +A  + D+  ++R  L+D  
Sbjct: 1137 TGDIAGVVRLWGVAGGTQRRILTRHGAAVYRVLFSPDGTLLA--SSDNNRVMR--LIDPA 1192

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                   +   +  +    F  +G +   +   D    ++  D  S A   LT       
Sbjct: 1193 TGEQRHELTGHKGAVWPMVFRPDGGQIA-TSSNDRTARLW--DPVSGACRVLTGHGRRLN 1249

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S  +SPD S +   S  +G  ++++       +              +++P G  IA T 
Sbjct: 1250 SVRFSPDGSLLA-TSGNDG--EVWLWDPRTGQRHGELTGAADRLTSAIFTPIGRRIAATS 1306

Query: 366  FSGEKF-----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +G        A G     G +  L VE  ++ A  +SP G  +      + D   +L+ 
Sbjct: 1307 SAGGVHLWNLDAPGTQDTGGYERELRVETDHVWAQVFSPDGEIIA---TANDDDSVRLW- 1362

Query: 421  IDLNGRNET-------LINTPAYASDPQ 441
                GR+          + + A+A D +
Sbjct: 1363 YRGTGRHIRTFEGHKGRVRSLAFAPDGR 1390



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 82/237 (34%), Gaps = 20/237 (8%)

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G    +L + D  G  +R L P     ++   F P+   +A    D      V L  T  
Sbjct: 1013 GDSSGTLRLWDTAGGQVRALLPGHASRVWTAAFHPDGSLLATGDSDG----TVRLWQTAT 1068

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINI 305
             +  +RI    + +    FS +G     +        ++  D  +      L        
Sbjct: 1069 GQLHQRIST-AAEVFRLAFSPDGSLLATAGDGGG---VHLWDPATGELREDLVGHERAVY 1124

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            +  + PD   +    D  G  +L+     G  Q+RI     A+ +  ++SP G L+A   
Sbjct: 1125 TLDFHPDGHLLA-TGDIAGVVRLW--GVAGGTQRRILTRHGAAVYRVLFSPDGTLLA--- 1178

Query: 366  FSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             S     + ++     ++R  L      +    + P G  +  S     D  ++L+ 
Sbjct: 1179 SSDNNRVMRLIDPATGEQRHELTGHKGAVWPMVFRPDGGQIATSSN---DRTARLWD 1232



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 112/326 (34%), Gaps = 34/326 (10%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++    +   V   LWD +  ++                    +D +  +I    G  
Sbjct: 1257 GSLLATSGNDGEV--WLWDPRTGQRHGELT-------------GAADRLTSAIFTPIGR- 1300

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
              RI   S +    +           G   R L    D + +   FSP+ + +A A  DD
Sbjct: 1301 --RIAATSSAGGVHLWNLDAPGTQDTGGYERELRVETDHV-WAQVFSPDGEIIATANDDD 1357

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L      R  +     +  + +  F+ +G+    +   D  + ++  D ++  
Sbjct: 1358 ----SVRLWYRGTGRHIRTFEGHKGRVRSLAFAPDGRLLA-TGCDDSGVRLW--DTETGE 1410

Query: 294  TER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              R LT       +  ++PD S +   S+ +G  +L+   +   +  R+        +  
Sbjct: 1411 CRRTLTGHTDRVYAVLFTPDGSLLASASN-DGTARLW--DAATGELLRVFAQHRGRLWAA 1467

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             +SP G ++A T        +  +   G  + L      + +  +SP G  L        
Sbjct: 1468 AFSPDGTVLA-TAGDDLVVQLWDIASGGRLDTLAGHTRRIWSLDFSPDGTRLA---SCGD 1523

Query: 413  DTGSKLYSIDLNGRNETLINTPAYAS 438
            D  ++L+++  +G     +    + S
Sbjct: 1524 DGTARLWNVGRSGPTGLAVTLVGHES 1549



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 103/339 (30%), Gaps = 65/339 (19%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD----FNS 175
                +    RLW V    Q             R+I       +Y+ +    G      ++
Sbjct: 1136 ATGDIAGVVRLWGVAGGTQ-------------RRILTRHGAAVYRVLFSPDGTLLASSDN 1182

Query: 176  RILFVSESVVSGIIKNSL---------CVMDRDGANIRYLTPSRDQILFEP--------- 217
              +       +G  ++ L          V   DG  I   +  R   L++P         
Sbjct: 1183 NRVMRLIDPATGEQRHELTGHKGAVWPMVFRPDGGQIATSSNDRTARLWDPVSGACRVLT 1242

Query: 218  ---------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                     RFSP+   +A +  D E    V+L D R  +    +      + +  F+  
Sbjct: 1243 GHGRRLNSVRFSPDGSLLATSGNDGE----VWLWDPRTGQRHGELTGAADRLTSAIFTPI 1298

Query: 269  GKRALISVQKDEAMDIYSVDL-----QSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            G+R   +      + ++++D             L        +  +SPD   I   +D  
Sbjct: 1299 GRRIAATSSAGG-VHLWNLDAPGTQDTGGYERELRVETDHVWAQVFSPDGEIIATAND-- 1355

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              + + +         R  +  +       ++P G L+A          + +   +  + 
Sbjct: 1356 -DDSVRLWYRGTGRHIRTFEGHKGRVRSLAFAPDGRLLATGCDDSG---VRLWDTETGEC 1411

Query: 384  RLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
            R  +     +     ++P G  L  +     D  ++L+ 
Sbjct: 1412 RRTLTGHTDRVYAVLFTPDGSLLASASN---DGTARLWD 1447



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 64/188 (34%), Gaps = 8/188 (4%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G   + + + D +    R         ++   F+P+   +A A+ D        L D  
Sbjct: 1394 TGCDDSGVRLWDTETGECRRTLTGHTDRVYAVLFTPDGSLLASASNDG----TARLWDAA 1449

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 +     R  + A  FS +G     +   D  + ++ +       + L        
Sbjct: 1450 TGELLRVFAQHRGRLWAAAFSPDGTVLA-TAGDDLVVQLWDI-ASGGRLDTLAGHTRRIW 1507

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S  +SPD +++    D +G  +L+ +  +G     ++            +P G       
Sbjct: 1508 SLDFSPDGTRLASCGD-DGTARLWNVGRSGPTGLAVTLVG-HESGWAALAPDGGYKFGGD 1565

Query: 366  FSGEKFAI 373
             +GE + +
Sbjct: 1566 LAGEIWHV 1573



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 58/176 (32%), Gaps = 18/176 (10%)

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +S +G    I+ ++     I   D  +    +         S +Y    +  V  S    
Sbjct: 921  YSPDGGILAIASEEGG---ILLCDAATGRPLQTLQGHH---SRAYIVRYASEVLVS--GS 972

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             +    +    S +   +      +  PV  SP G LIA    SG    + +    G Q 
Sbjct: 973  NDTTVRLWEPTSGRCLHTLGGHRDWAWPVEPSPDGSLIAVGDSSGT---LRLWDTAGGQV 1029

Query: 384  RLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            R L+    S +    + P G  L      D D   +L+     G+    I+T A  
Sbjct: 1030 RALLPGHASRVWTAAFHPDGSLLA---TGDSDGTVRLWQT-ATGQLHQRISTAAEV 1081


>gi|119964335|ref|YP_947935.1| acylaminoacyl-peptidase [Arthrobacter aurescens TC1]
 gi|119951194|gb|ABM10105.1| putative acylaminoacyl-peptidase [Arthrobacter aurescens TC1]
          Length = 660

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 90/267 (33%), Gaps = 38/267 (14%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDT-----RIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P   P+  K   +    +     Y+           + P+RI        +P FS +G  
Sbjct: 4   PAIHPDGTKAVVSVTRPDFDADSYVGQLWNVPLDTTKFPRRITRGFR-DSSPAFSPDGLV 62

Query: 272 ALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                   +    +Y V+      +R+T+         ++PDS +I FE+    + +   
Sbjct: 63  LAFLRSDPNGKPQLYVVEAAGGEPQRITDQHAGVGGFVWAPDSHRIAFEARVPEQGRYGT 122

Query: 331 MQSNGSDQK--RISQDKEASYFDPVWSPQGD---LIAFTKFSGEKFAIG----------V 375
           +   GS  +  R+    +       ++        +      G + A+            
Sbjct: 123 VDGVGSGAEDARLIAVNQYKQNGVGYTSDQRQQLFVVEVPELGGEPAVAPRGRAAHEQPT 182

Query: 376 MKKDG--SQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNG---- 425
               G  + +++   DS+ ++P +S  G  L F        D D  + +Y +  +G    
Sbjct: 183 RTATGIPTAKQVTYGDSDHESPCFSADGTHLYFIAALHEGHDDDLVTAVYRVAADGGQPT 242

Query: 426 -----RNETLINTPAYAS-DPQWVGFM 446
                + +    T   AS D +W+ ++
Sbjct: 243 AVEPFKQKLQTVTAVRASTDGRWLFYV 269



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 93/291 (31%), Gaps = 39/291 (13%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           +        +      L  +  D     R +T         P FSP+   +A+   D   
Sbjct: 15  VSVTRPDFDADSYVGQLWNVPLDTTKFPRRITRG--FRDSSPAFSPDGLVLAFLRSDPNG 72

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             ++Y+++      P+RI +  + +    ++ +  R     +  E     +VD   +  E
Sbjct: 73  KPQLYVVE-AAGGEPQRITDQHAGVGGFVWAPDSHRIAFEARVPEQGRYGTVDGVGSGAE 131

Query: 296 --RLTNTLFINISAS-YSPDSSQIVFE--------------SDREGKEQLYVMQSNGSDQ 338
             RL        +   Y+ D  Q +F                 R   EQ     +     
Sbjct: 132 DARLIAVNQYKQNGVGYTSDQRQQLFVVEVPELGGEPAVAPRGRAAHEQPTRTATGIPTA 191

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLL----VE 388
           K+++   ++ +  P +S  G  + F     E         +  +  DG Q   +     +
Sbjct: 192 KQVTY-GDSDHESPCFSADGTHLYFIAALHEGHDDDLVTAVYRVAADGGQPTAVEPFKQK 250

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTG-------SKLYSIDLNGRNETLIN 432
              + A   S  GR L +  +  GDTG       + LY +   G     + 
Sbjct: 251 LQTVTAVRASTDGRWLFYVAQDLGDTGKDFVARNAVLYVMPTAGGEAAALT 301



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 61/221 (27%), Gaps = 21/221 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVY 240
             G   +        G          D     P FS +   + +     E    D++   
Sbjct: 172 PRGRAAHEQPTRTATGIPTAKQVTYGDSDHESPCFSADGTHLYFIAALHEGHDDDLVTAV 231

Query: 241 LMDTRIDRAPKRIGNFRS---MILAPRFSSNGKRALISVQKDE---------AMDIYSVD 288
                    P  +  F+     + A R S++G+      Q               +Y + 
Sbjct: 232 YRVAADGGQPTAVEPFKQKLQTVTAVRASTDGRWLFYVAQDLGDTGKDFVARNAVLYVMP 291

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEA 347
                   LT+   +++S    P     V   +   G  +L  + + G     +      
Sbjct: 292 TAGGEAAALTDVEHLDVSGPLEPSGPASVLVLNTALGSVELLDVTAEGGITPLV--HGNR 349

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                  +  G+ IA   FS       V   +  + RLL +
Sbjct: 350 VVVGATVAANGE-IA-VSFSDASTVGDVASLERGEIRLLTD 388


>gi|270160220|ref|ZP_06188876.1| TolB-like protein [Legionella longbeachae D-4968]
 gi|269988559|gb|EEZ94814.1| TolB-like protein [Legionella longbeachae D-4968]
          Length = 286

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 83/246 (33%), Gaps = 29/246 (11%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +   + DG+  R +T       + P  SP+ + +AY T D +   R   +         +
Sbjct: 30  IWTSNLDGSKARKITAG-----YVPEISPDGKYIAYNTADHQSTNRYLAIVELKSGKVAQ 84

Query: 253 IGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           + +  S     P +S + K+ + +   +    +  ++  S+    L N      +  ++ 
Sbjct: 85  LQHIPSKNNFNPVWSPDSKKLIFNTFINNNWYLALINKDSSG-YLLLNNTQNKYTPVWAQ 143

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQK------RISQDKEASYFDPVWSPQGDLIAF-- 363
           D +   F  D    E +Y M   G   K       I     +S      SP G  +    
Sbjct: 144 DGNSF-FTHD---LETIYWMNLEGKLLKKWPLDTLIPHGSMSSASRIQVSPDGKTLLMDV 199

Query: 364 --------TKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                     + G   A+  +    G   R+  + +   +P W  + +  IF ++     
Sbjct: 200 DMDEEVHERNWEGPPPALWTLDLESGKTTRITPKGTLAWSPFWI-NSQQFIFLKQGKNKQ 258

Query: 415 GSKLYS 420
              LY 
Sbjct: 259 TLALYR 264



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 14/156 (8%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQ-LYV 330
           +I+ ++     I++ +L  +   ++T           SPD   I +  +D +   + L +
Sbjct: 21  VIAFERSGF--IWTSNLDGSKARKITAG----YVPEISPDGKYIAYNTADHQSTNRYLAI 74

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++       ++      + F+PVWSP    + F  F    + + ++ KD S   LL    
Sbjct: 75  VELKSGKVAQLQHIPSKNNFNPVWSPDSKKLIFNTFINNNWYLALINKDSSGYLLLNNTQ 134

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           N   P W+  G S  F+   +      +Y ++L G+
Sbjct: 135 NKYTPVWAQDGNSF-FTHDLE-----TIYWMNLEGK 164



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 76/231 (32%), Gaps = 32/231 (13%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L +++     +  L     +  F P +SP+ +K+ + T+ + +    YL     D
Sbjct: 67  STNRYLAIVELKSGKVAQLQHIPSKNNFNPVWSPDSKKLIFNTFINNNW---YLALINKD 123

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--- 304
            +   + N       P ++ +G     S    +   IY ++L+    ++      I    
Sbjct: 124 SSGYLLLNNTQNKYTPVWAQDGN----SFFTHDLETIYWMNLEGKLLKKWPLDTLIPHGS 179

Query: 305 -ISAS---YSPDSSQIVFESDRE----------GKEQLYVMQSNGSDQKRISQDKEASYF 350
             SAS    SPD   ++ + D +              L+ +        RI+        
Sbjct: 180 MSSASRIQVSPDGKTLLMDVDMDEEVHERNWEGPPPALWTLDLESGKTTRITPKG----- 234

Query: 351 DPVWSP---QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
              WSP         F K    K  + + +            +++Q P+ S
Sbjct: 235 TLAWSPFWINSQQFIFLKQGKNKQTLALYRGSLKNLVETFLLNDVQTPSIS 285


>gi|83592621|ref|YP_426373.1| WD-40 repeat-containing protein [Rhodospirillum rubrum ATCC 11170]
 gi|83575535|gb|ABC22086.1| WD-40 repeat [Rhodospirillum rubrum ATCC 11170]
          Length = 1491

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 98/242 (40%), Gaps = 12/242 (4%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +L    +  +    FSP+ ++V   T   E  +RV+ +     +     G+ R+   A R
Sbjct: 1059 FLLEGHEGSIQSASFSPDGRRV--VTGSGEGTVRVWDLSAPKSQPILLRGHLRATFFA-R 1115

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS++G+  +++   D    +++V         L  +     SAS+SPD   +V  SD   
Sbjct: 1116 FSADGRS-VVTASYDGTARVWAVPAVEPGELFLEGSDDSVRSASFSPDGEHLVTISD--- 1171

Query: 325  KEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + V   +    + +  +  E S     +SP G  +             + +      
Sbjct: 1172 DKTVRVWDLSVPKPRSLLLEGYEGSVQSASFSPDGQRLVTVSDDKTARVWDLAEPKAKAL 1231

Query: 384  RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQW 442
             L  +D+++ + ++SP GR ++ +     D  ++++ +  L  R  TL ++  +     +
Sbjct: 1232 ILEGDDASVGSASFSPDGRRVVTASY---DKTARVWDLSALKPRAITLESSLGWVGSANF 1288

Query: 443  VG 444
              
Sbjct: 1289 SP 1290



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 84/216 (38%), Gaps = 14/216 (6%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISV 276
             FSP+ Q+V   + D        + D    +        R   + +  FS +G+R +++ 
Sbjct: 901  SFSPDGQRVLKTSEDG----TAQVWDLSSSKIQAITLGERGHYVQSASFSPDGRR-VVTA 955

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              D A  ++ +         L        SAS+SPD  ++V  S  +G  +++ +     
Sbjct: 956  SSDGAAQVWDLSAPKTQAILLEGHEQPVQSASFSPDGQKVVTVSS-DGTARVWNLSEP-K 1013

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAP 395
             Q  +    +       +SP G  +      G+   +  +    SQ  LL   + ++Q+ 
Sbjct: 1014 PQALLLDGHKGLVQLASFSPDGQHVVTAS--GDTARVWDLSAPKSQAFLLEGHEGSIQSA 1071

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            ++SP GR ++      G+   +++ +        L+
Sbjct: 1072 SFSPDGRRVV---TGSGEGTVRVWDLSAPKSQPILL 1104



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 94/244 (38%), Gaps = 13/244 (5%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLT-PSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
              VV+G  + ++ V D      + +      +  F  RFS + + V  A+YD     RV+
Sbjct: 1078 RRVVTGSGEGTVRVWDLSAPKSQPILLRGHLRATFFARFSADGRSVVTASYD--GTARVW 1135

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +           G+  S + +  FS +G+  + ++  D+ + ++ + +    +  L   
Sbjct: 1136 AVPAVEPGELFLEGSDDS-VRSASFSPDGEHLV-TISDDKTVRVWDLSVPKPRSLLLEGY 1193

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGD 359
                 SAS+SPD  ++V  SD    +   V        K  I +  +AS     +SP G 
Sbjct: 1194 EGSVQSASFSPDGQRLVTVSD---DKTARVWDLAEPKAKALILEGDDASVGSASFSPDGR 1250

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             +    +        +         L      + +  +SP G+ ++ +       G++++
Sbjct: 1251 RVVTASYDKTARVWDLSALKPRAITLESSLGWVGSANFSPDGQRVVGASY----GGAQIW 1306

Query: 420  SIDL 423
             + +
Sbjct: 1307 DLSV 1310



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 57/326 (17%), Positives = 113/326 (34%), Gaps = 52/326 (15%)

Query: 109  QVLVTGRVIKEGKDRLRVE----FRLWD--VKDRKQIIGKKFFSSPASWRKIAHTISDDI 162
              + +     +G+  + +      R+WD  V   + ++ + +  S  S      + S D 
Sbjct: 1152 DSVRSASFSPDGEHLVTISDDKTVRVWDLSVPKPRSLLLEGYEGSVQSA-----SFSPD- 1205

Query: 163  YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
             Q +     D  +R+  ++E                       +    D  +    FSP+
Sbjct: 1206 GQRLVTVSDDKTARVWDLAEPKAKA-----------------LILEGDDASVGSASFSPD 1248

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             ++V  A+YD     RV+ +     RA   + +    + +  FS +G+R +         
Sbjct: 1249 GRRVVTASYD--KTARVWDLSALKPRAIT-LESSLGWVGSANFSPDGQRVV--GASYGGA 1303

Query: 283  DIYSVDLQSN-----ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             I+ + +          ++L     +  SAS+SPD  ++V  SD   +    V+  +   
Sbjct: 1304 QIWDLSVPERPKLCMRLKQL--NAGLLQSASFSPDGGRVVTVSDGGTR----VVDLSTPK 1357

Query: 338  QKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQ 393
               I+            +SP G  +    + G      V    GSQ   LV     S++ 
Sbjct: 1358 SPPITLGGRLDRARSASFSPDGQRVLTASYDGTA---RVWDLAGSQASALVLGEYSSSML 1414

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLY 419
               +S  GR ++     +      +Y
Sbjct: 1415 YANFSRDGRRVLTFSSPNKLRVWDVY 1440


>gi|300868388|ref|ZP_07113013.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300333606|emb|CBN58201.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 1236

 Score = 87.4 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 56/333 (16%), Positives = 101/333 (30%), Gaps = 38/333 (11%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH----------------T 157
            G+ +  G     V  +LW+      +            R +A                  
Sbjct: 796  GKTLASGGGDRTV--KLWETSTGTLLA--SLPGHSQRLRSLAFSPDGKLLASGSGDRTVK 851

Query: 158  ISDDIYQSITGEKGDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
            I D   +         +SR+  V  S      VSG    ++   +    N   +      
Sbjct: 852  IWDLTAKRCLKTLHGHSSRLCAVVFSPDGNTLVSGGEDRTVRFWEVSTGNCNSIWQGYAS 911

Query: 213  ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
                  FSP+ + +A  + D    L    +++    +P  +      + +  FS +G   
Sbjct: 912  WFQSVAFSPDGKTLASGSEDGTVKLWKTNLNSSGPCSPITLLGHAGWVCSVAFSPDGTTL 971

Query: 273  LISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
              S   D  + ++  D  S       L N  +I  S ++SPD   +       G   + +
Sbjct: 972  A-SASSDYTIKLW--DASSGTCLKTLLGNPRWI-RSIAFSPDGKMLA---SGGGDNTVKL 1024

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                  +     +      +   +SP G  I  +    +   +  +             S
Sbjct: 1025 WNLRSGNCCATWRSHAGWLWSVAFSPNG-AIVASASEDKTVKLWCVHTGRCLRTFEGHSS 1083

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +QA  +SP GR L        D   KL+ ID 
Sbjct: 1084 WVQAVAFSPDGRLLA---SGSCDQTIKLWDIDT 1113



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 79/220 (35%), Gaps = 10/220 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D    N        +Q +    FSP+ Q VA ++ D      V L D +
Sbjct: 675 SGSSDRTVKIWDVGTGNCLKTLSGHNQRVRTVAFSPDSQTVASSSSDR----TVRLWDIQ 730

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +      S + +  FS NG+    S  +D  + ++ V L     +   ++     
Sbjct: 731 SGWCQQIYAGHTSYVWSVTFSPNGRTLA-SGSEDRTIKLWDV-LTGKCLQTWQDSSSWVR 788

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + ++SPD   +       G   + + +++                   +SP G L+A + 
Sbjct: 789 TLAFSPDGKTLA---SGGGDRTVKLWETSTGTLLASLPGHSQRLRSLAFSPDGKLLA-SG 844

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  I  +      + L    S L A  +SP G +L+
Sbjct: 845 SGDRTVKIWDLTAKRCLKTLHGHSSRLCAVVFSPDGNTLV 884



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 78/240 (32%), Gaps = 17/240 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     +C+   D   +  +       +    FSPN   +   + D      V + D  
Sbjct: 633 TGDANGEICLWLADDGTLLRIYEGHAGWVNSIAFSPNGSLLCSGSSDR----TVKIWDVG 688

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFIN 304
                K +      +    FS + +    S   D  + ++  D+QS   +++        
Sbjct: 689 TGNCLKTLSGHNQRVRTVAFSPDSQTVA-SSSSDRTVRLW--DIQSGWCQQIYAGHTSYV 745

Query: 305 ISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            S ++SP+   +   S DR     + +         +  QD  +      +SP G  +A 
Sbjct: 746 WSVTFSPNGRTLASGSEDRT----IKLWDVLTGKCLQTWQDSSSWVRTLAFSPDGKTLA- 800

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +        +           L      L++  +SP G+ L       GD   K++ +  
Sbjct: 801 SGGGDRTVKLWETSTGTLLASLPGHSQRLRSLAFSPDGKLLA---SGSGDRTVKIWDLTA 857



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 59/383 (15%), Positives = 114/383 (29%), Gaps = 96/383 (25%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++  G     V  ++WDV     +  K         R +A   S D            
Sbjct: 670  GSLLCSGSSDRTV--KIWDVGTGNCL--KTLSGHNQRVRTVA--FSPD------------ 711

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                   S++V S     ++ + D      + +       ++   FSPN + +A  + D 
Sbjct: 712  -------SQTVASSSSDRTVRLWDIQSGWCQQIYAGHTSYVWSVTFSPNGRTLASGSEDR 764

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-- 291
                 + L D    +  +   +  S +    FS +GK    S   D  + ++     +  
Sbjct: 765  ----TIKLWDVLTGKCLQTWQDSSSWVRTLAFSPDGKTLA-SGGGDRTVKLWETSTGTLL 819

Query: 292  ----NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-------------- 333
                  ++RL        S ++SPD   +   S   G   + +                 
Sbjct: 820  ASLPGHSQRL-------RSLAFSPDGKLLASGS---GDRTVKIWDLTAKRCLKTLHGHSS 869

Query: 334  ---------------NGSDQKRIS------------QDKEASYFDP-VWSPQGDLIAFTK 365
                           +G + + +                 AS+F    +SP G  +A + 
Sbjct: 870  RLCAVVFSPDGNTLVSGGEDRTVRFWEVSTGNCNSIWQGYASWFQSVAFSPDGKTLA-SG 928

Query: 366  FSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   +     + S       LL     + +  +SP G +L  +     D   KL+  
Sbjct: 929  SEDGTVKLWKTNLNSSGPCSPITLLGHAGWVCSVAFSPDGTTLASASS---DYTIKLWDA 985

Query: 422  DLNGRNETLINTPAYASDPQWVG 444
                  +TL+  P +     +  
Sbjct: 986  SSGTCLKTLLGNPRWIRSIAFSP 1008



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 76/241 (31%), Gaps = 13/241 (5%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++ S     ++ + D              + +    FSP+ + +A           V L 
Sbjct: 970  TLASASSDYTIKLWDASSGTCLKTLLGNPRWIRSIAFSPDGKMLA----SGGGDNTVKLW 1025

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            + R         +    + +  FS NG   + S  +D+ + ++ V               
Sbjct: 1026 NLRSGNCCATWRSHAGWLWSVAFSPNGA-IVASASEDKTVKLWCV-HTGRCLRTFEGHSS 1083

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               + ++SPD   +   S     + + +   +     +   D  +      +SP G  +A
Sbjct: 1084 WVQAVAFSPDGRLLASGSC---DQTIKLWDIDTGQCLQTFWDHVSWVQTVAFSPDGKFLA 1140

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +    +      +      + L    + + A  +SP+G  L        D   KL+ + 
Sbjct: 1141 -SGSCDQTVKFWEIDSGECWQTLSAHTNWVWAIAFSPNGDILA---SAGQDETIKLWKVS 1196

Query: 423  L 423
             
Sbjct: 1197 T 1197



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 88/235 (37%), Gaps = 29/235 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A  T D    + ++L D       +        + +  FS NG   L S  
Sbjct: 623 AFSPDGTLLA--TGDANGEICLWLADDGT--LLRIYEGHAGWVNSIAFSPNG-SLLCSGS 677

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIV-FESDREGKEQLYVMQSNG 335
            D  + I+  D+ +    + L+       + ++SPDS  +    SDR     + +     
Sbjct: 678 SDRTVKIW--DVGTGNCLKTLSGHNQRVRTVAFSPDSQTVASSSSDRT----VRLWDIQS 731

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              ++I     +  +   +SP G  +A      E   I +      +     +DS+    
Sbjct: 732 GWCQQIYAGHTSYVWSVTFSPNGRTLA---SGSEDRTIKLWDVLTGKCLQTWQDSSSWVR 788

Query: 396 T--WSPSGRSLIFSRKKDGDTGSKLY-------SIDLNGRNETLINTPAYASDPQ 441
           T  +SP G++L       GD   KL+          L G ++ L +  A++ D +
Sbjct: 789 TLAFSPDGKTLA---SGGGDRTVKLWETSTGTLLASLPGHSQRLRSL-AFSPDGK 839



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 63/187 (33%), Gaps = 20/187 (10%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D       K++ N    +LA  FS +G     +   +  + ++  D              
Sbjct: 606 DLAKSVFAKQLTN----VLALAFSPDGTLLA-TGDANGEICLWLAD-DGTLLRIYEGHAG 659

Query: 303 INISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              S ++SP+ S +    SDR     + +      +  +             +SP    +
Sbjct: 660 WVNSIAFSPNGSLLCSGSSDRT----VKIWDVGTGNCLKTLSGHNQRVRTVAFSPDSQTV 715

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           A +        + +        + +     S + + T+SP+GR+L        D   KL+
Sbjct: 716 ASSSSDRT---VRLWDIQSGWCQQIYAGHTSYVWSVTFSPNGRTLA---SGSEDRTIKLW 769

Query: 420 SIDLNGR 426
            + L G+
Sbjct: 770 DV-LTGK 775


>gi|116669136|ref|YP_830069.1| hypothetical protein Arth_0570 [Arthrobacter sp. FB24]
 gi|116609245|gb|ABK01969.1| conserved hypothetical protein [Arthrobacter sp. FB24]
          Length = 314

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 77/193 (39%), Gaps = 17/193 (8%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFE 319
           AP ++ +G+  ++    +    ++++D+         LT    +N     +P  + I F 
Sbjct: 49  APNWTLDGRSLVL----NGDGKLWTLDVSGGRLTEVPLTGVPDLNNDHVLAPGGTGI-FL 103

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----AIGV 375
           S  +G   +Y    +G + +RI+ D  + +F    SP G  +A+       F     +  
Sbjct: 104 SANDG--HIYRAPLDGGEGQRITDDDGSFHFLHGVSPDGGELAYVGIQAGDFTRPGRLMT 161

Query: 376 MKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRK--KDGDTGSKLYSIDLNGRN-ETLI 431
           +  DG     + V   +   P +SP G+ L F+ +        ++L  + ++G   E L+
Sbjct: 162 IPSDGGTTAAVDVGPGHCDGPEYSPDGQWLYFNTESFSSLPGHAQLARVQVDGSGFERLL 221

Query: 432 NTPAYASDPQWVG 444
            +      P    
Sbjct: 222 ESVTVDWFPHLSP 234



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 88/291 (30%), Gaps = 36/291 (12%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
                  +    +  + +    G +    +   + +L  P ++ + + +      D  + 
Sbjct: 12  ALAMLRTLEPGQRCEVWIASVTGESEMVFSTD-EVLLEAPNWTLDGRSL--VLNGDGKLW 68

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + +   R+   P  +     +      +  G    +S        IY   L     +R+
Sbjct: 69  TLDVSGGRLTEVP--LTGVPDLNNDHVLAPGGTGIFLSANDG---HIYRAPLDGGEGQRI 123

Query: 298 TNTLFINISASY----SPDSSQIVFESDREGK----EQLYVMQSNGSDQKRISQDKEASY 349
           T+    + S  +    SPD  ++ +   + G      +L  + S+G     +        
Sbjct: 124 TDD---DGSFHFLHGVSPDGGELAYVGIQAGDFTRPGRLMTIPSDGGTTAAV-DVGPGHC 179

Query: 350 FDPVWSPQGDLIAFTKFS----GEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGR-- 402
             P +SP G  + F   S         +  ++ DGS  ERLL   +    P  SP G   
Sbjct: 180 DGPEYSPDGQWLYFNTESFSSLPGHAQLARVQVDGSGFERLLESVTVDWFPHLSPDGELA 239

Query: 403 -SLIFSRKKDGDTGS---KLYSIDLNGRNETLINTPAYASDP-----QWVG 444
             + F    +G        +  +        L   P +          W  
Sbjct: 240 CYIRFLTGTEGHPADLPVDVVLVSTGDWTAPLHTWPLFGGQGTLNVNSWSP 290



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 80/249 (32%), Gaps = 37/249 (14%)

Query: 193 LCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L  +D  G  +  +       +  +   +P    + + + +D  I R  L         +
Sbjct: 67  LWTLDVSGGRLTEVPLTGVPDLNNDHVLAPGGTGI-FLSANDGHIYRAPLD----GGEGQ 121

Query: 252 RIGNFRSMI-LAPRFSSNGKRALISVQKDEAM----DIYSVDLQSNATERLTNTLFINIS 306
           RI +           S +G        +         + ++      T  +         
Sbjct: 122 RITDDDGSFHFLHGVSPDGGELAYVGIQAGDFTRPGRLMTIPSDGGTTAAVDVGPGHCDG 181

Query: 307 ASYSPDSSQIVFE----SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             YSPD   + F     S   G  QL  +Q +GS  +R+ +     +F P  SP G+L  
Sbjct: 182 PEYSPDGQWLYFNTESFSSLPGHAQLARVQVDGSGFERLLESVTVDWF-PHLSPDGELAC 240

Query: 363 FTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQAP----------------TWSPSGRSLI 405
           + +F +G +     +  D     +LV   +  AP                +WSP      
Sbjct: 241 YIRFLTGTEGHPADLPVD----VVLVSTGDWTAPLHTWPLFGGQGTLNVNSWSPDSARFA 296

Query: 406 FSRKKDGDT 414
           +     G+T
Sbjct: 297 YVAYPLGNT 305



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 66/183 (36%), Gaps = 19/183 (10%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +++  +  +++   +   +    +    +  + +++ D   +V      G  +L+ +  +
Sbjct: 18  TLEPGQRCEVWIASVTGESEMVFSTDEVLLEAPNWTLDGRSLVLN----GDGKLWTLDVS 73

Query: 335 GSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           G     +          D V +P G  I  +   G    I     DG + + + +D    
Sbjct: 74  GGRLTEVPLTGVPDLNNDHVLAPGGTGIFLSANDG---HIYRAPLDGGEGQRITDDDGSF 130

Query: 394 AP--TWSPSGRSLIFSRKKDGDTG--SKLYSIDLNGRNETLIN-------TPAYASDPQW 442
                 SP G  L +   + GD     +L +I  +G     ++        P Y+ D QW
Sbjct: 131 HFLHGVSPDGGELAYVGIQAGDFTRPGRLMTIPSDGGTTAAVDVGPGHCDGPEYSPDGQW 190

Query: 443 VGF 445
           + F
Sbjct: 191 LYF 193


>gi|282896190|ref|ZP_06304213.1| hypothetical protein CRD_01071 [Raphidiopsis brookii D9]
 gi|281198879|gb|EFA73757.1| hypothetical protein CRD_01071 [Raphidiopsis brookii D9]
          Length = 1337

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 82/228 (35%), Gaps = 21/228 (9%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +    +  +    FSP+ Q +A  ++D      V L + R     ++       I + 
Sbjct: 749 RNIIKGHEGGITSVCFSPDGQSIATGSWDK----TVRLWNLR-GENIQQFRGHEGGITSV 803

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G+    +  +D    ++  +LQ    ++         S  +SPD   I      +
Sbjct: 804 CFSPDGQSIG-TGSEDGTARLW--NLQGKNIQQFRGHEGGITSVCFSPDGQSIG-TGSED 859

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  +L+     G + ++  +  E       +SP G  I       E     +    G   
Sbjct: 860 GTARLW--NLQGKNIQQF-RGHEGGITSVCFSPDGQNI---GTGSEDRTARLWNLQGENI 913

Query: 384 RLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +      +   + ++SP G++L  +     D  ++L+  +L G     
Sbjct: 914 QQFHGHEDWVTSVSFSPDGQTLATTSV---DKTARLW--NLQGETIQQ 956



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 87/250 (34%), Gaps = 18/250 (7%)

Query: 161  DIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            +  Q   G +G   S       +S+ +G    +  + +  G NI+      +  +    F
Sbjct: 788  ENIQQFRGHEGGITSVCFSPDGQSIGTGSEDGTARLWNLQGKNIQQ-FRGHEGGITSVCF 846

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+ Q +   + D     R++ +     +  ++       I +  FS +G+    +  +D
Sbjct: 847  SPDGQSIGTGSED--GTARLWNLQ---GKNIQQFRGHEGGITSVCFSPDGQNIG-TGSED 900

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                ++  +LQ    ++         S S+SPD   +   S     +   +    G   +
Sbjct: 901  RTARLW--NLQGENIQQFHGHEDWVTSVSFSPDGQTLATTSV---DKTARLWNLQGETIQ 955

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWS 398
            +     E       +SP G  +A T          +    G   +      N   + ++S
Sbjct: 956  QF-HGHENWVTSVSFSPDGQTLATTSVDKTA---RLWNLQGETIQQFHGHENWVTSVSFS 1011

Query: 399  PSGRSLIFSR 408
            P G++L  + 
Sbjct: 1012 PDGQTLATTS 1021



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 98/254 (38%), Gaps = 29/254 (11%)

Query: 164  QSITGEKG--DFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
              I   +G  D+ + + F    +++ +G   N+  + +R+G  ++     + ++     F
Sbjct: 1034 HKIQEIRGHEDWVTSVSFSPDGQTIATGSRDNTARLWNREGHLVQEFKGHQSRVTSV-NF 1092

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISV 276
            SP+ Q +   + D     R++ +   +      +G F      + +  FS +G+    + 
Sbjct: 1093 SPDGQTIGTGSAD--KTARLWNLQGDV------LGEFPGHQDWVTSVSFSPDGQTIA-TG 1143

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +D+   ++  +LQ +             S S+SP+   +V      G +++  + +   
Sbjct: 1144 SRDKTARLW--NLQGDVLREFPGHEDWVTSVSFSPNGQTLV----TGGADKIARLWNLQG 1197

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-VMKKDGSQERLLV-EDSNLQA 394
            D        E       +SP G+ +     +G    I  +    G   R     DS +  
Sbjct: 1198 DLLGEFPGHEGGVTSVSFSPNGETLV----TGSVDKIARLWNLKGYLIREFKGHDSGITN 1253

Query: 395  PTWSPSGRSLIFSR 408
             ++SP G++L  + 
Sbjct: 1254 VSFSPDGQTLATAS 1267



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 92/255 (36%), Gaps = 22/255 (8%)

Query: 173  FNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            + + + F    +++ +  +  +  + +  G  I+      +  +    FSP+ Q +A  +
Sbjct: 963  WVTSVSFSPDGQTLATTSVDKTARLWNLQGETIQQ-FHGHENWVTSVSFSPDGQTLATTS 1021

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             D     R++ +        + I      + +  FS +G+    +  +D    ++  + +
Sbjct: 1022 VD--KTARLWGLH---RHKIQEIRGHEDWVTSVSFSPDGQTIA-TGSRDNTARLW--NRE 1073

Query: 291  SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             +  +          S ++SPD   I      +   +L+ +Q    D        +    
Sbjct: 1074 GHLVQEFKGHQSRVTSVNFSPDGQTIG-TGSADKTARLWNLQ---GDVLGEFPGHQDWVT 1129

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRK 409
               +SP G  IA            +    G   R      +   + ++SP+G++L+    
Sbjct: 1130 SVSFSPDGQTIATGSRDKTA---RLWNLQGDVLREFPGHEDWVTSVSFSPNGQTLV---T 1183

Query: 410  KDGDTGSKLYSIDLN 424
               D  ++L+++  +
Sbjct: 1184 GGADKIARLWNLQGD 1198



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 80/233 (34%), Gaps = 35/233 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFRS 258
           AN+       + +   P  SP                 +Y ++T +D    R  I     
Sbjct: 715 ANLLKSIVQNNPLDKYPTVSP-----------------IYALNTILDAISDRNIIKGHEG 757

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            I +  FS +G+    +   D+ + ++  +L+    ++         S  +SPD   I  
Sbjct: 758 GITSVCFSPDGQSIA-TGSWDKTVRLW--NLRGENIQQFRGHEGGITSVCFSPDGQSIG- 813

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
               +G  +L+     G + ++  +  E       +SP G  I      G      +   
Sbjct: 814 TGSEDGTARLW--NLQGKNIQQF-RGHEGGITSVCFSPDGQSIGTGSEDGTA---RLWNL 867

Query: 379 DGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            G   +     +  + +  +SP G+++        D  ++L+  +L G N   
Sbjct: 868 QGKNIQQFRGHEGGITSVCFSPDGQNI---GTGSEDRTARLW--NLQGENIQQ 915



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 76/201 (37%), Gaps = 21/201 (10%)

Query: 172  DFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            D+ + + F    +++ +G    +  + +  G  +R   P  +  +    FSPN Q +   
Sbjct: 1126 DWVTSVSFSPDGQTIATGSRDKTARLWNLQGDVLRE-FPGHEDWVTSVSFSPNGQTL--V 1182

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYS 286
            T   + I R++ +          +G F      + +  FS NG+  + +   D+   ++ 
Sbjct: 1183 TGGADKIARLWNLQGD------LLGEFPGHEGGVTSVSFSPNGETLV-TGSVDKIARLW- 1234

Query: 287  VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
             +L+               + S+SPD   +   +  +   +L+ ++       +  +  +
Sbjct: 1235 -NLKGYLIREFKGHDSGITNVSFSPDGQTLA-TASVDKTVRLWNLK---GQLIQEFKGYD 1289

Query: 347  ASYFDPVWSPQGDLIAFTKFS 367
             ++    +SP G  +A     
Sbjct: 1290 DTFTSVSFSPDGQTLATGSLD 1310



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 52/143 (36%), Gaps = 7/143 (4%)

Query: 145  FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
                    ++ +   D + +    E G  +       E++V+G +     + +  G  IR
Sbjct: 1183 TGGADKIARLWNLQGDLLGEFPGHEGGVTSVSFSPNGETLVTGSVDKIARLWNLKGYLIR 1242

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                  D  +    FSP+ Q +A A+ D      V L + +  +  +    +     +  
Sbjct: 1243 E-FKGHDSGITNVSFSPDGQTLATASVDK----TVRLWNLK-GQLIQEFKGYDDTFTSVS 1296

Query: 265  FSSNGKRALISVQKDEAMDIYSV 287
            FS +G+    +   D+   ++ V
Sbjct: 1297 FSPDGQTLA-TGSLDKIARLWPV 1318


>gi|145519668|ref|XP_001445696.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124413160|emb|CAK78299.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1497

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 99/260 (38%), Gaps = 19/260 (7%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                 F+       +++ SG   NS+ + D    + + +      I+    FSP+   +A
Sbjct: 992  HTSIVFSVCFSSDLKTLASGSWDNSILLWDFKTEHQKAILDGHTYIVNSVCFSPDGTTLA 1051

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             ++ D+     + L + +  +   ++    S I    FS +G   L S   D  + ++  
Sbjct: 1052 SSSGDN----SIRLWNVKTGQYKAKLDGHTSTICQVCFSPDGT-ILASGSWDNTIRLW-- 1104

Query: 288  DLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            ++Q      +L   +    S  +SPD S++   S       + +   N   Q        
Sbjct: 1105 NVQDKQQTAKLDGHIGTIHSVCFSPDGSKLASCS---WDRTIILWNVNTRQQMTQLSGHS 1161

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSL 404
             + +   +SP G+ +A          I + +    Q+++ ++     + +  +SP+G +L
Sbjct: 1162 ETIYSVCFSPNGETLASGSQDKS---IRLWEVSTGQQKVKLDGHTYVINSVCFSPNGTTL 1218

Query: 405  IFSRKKD---GDTGSKLYSI 421
              +       GD   +L+ I
Sbjct: 1219 ASAGGNPYGLGDFIIRLWDI 1238



 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 93/305 (30%), Gaps = 36/305 (11%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     RLW+V   +Q                 H  +  +Y       GD       
Sbjct: 835  ASGSYDKSIRLWNVSTGQQKAILN-----------GHLFA--VYSVCFSPNGD------- 874

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL-- 237
               ++ SG    S+C+ D    +   +       ++   +SPN   +A    +       
Sbjct: 875  ---TLASGSGDKSICLWDVRTGHQTKILDGHLNNVYSVCYSPNGTILASGGGNHFGGGDC 931

Query: 238  RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-R 296
             + L   +  +   ++      +    FS +G     S   D  + ++  D++S   + +
Sbjct: 932  SIRLWCVKTGQQSAQLDGHSGTVYTVCFSHDGTTLA-SGSHDNCIRLW--DIKSGLEKSK 988

Query: 297  LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                  I  S  +S D   +   S       + +       QK I            +SP
Sbjct: 989  FNKHTSIVFSVCFSSDLKTLASGS---WDNSILLWDFKTEHQKAILDGHTYIVNSVCFSP 1045

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             G  +A +        +  +K    + +L    S +    +SP G  L        D   
Sbjct: 1046 DGTTLA-SSSGDNSIRLWNVKTGQYKAKLDGHTSTICQVCFSPDGTILASGSW---DNTI 1101

Query: 417  KLYSI 421
            +L+++
Sbjct: 1102 RLWNV 1106



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 52/297 (17%), Positives = 98/297 (32%), Gaps = 40/297 (13%)

Query: 130  LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            LW+V  R+Q+                H  S+ IY       G          E++ SG  
Sbjct: 1145 LWNVNTRQQMTQLS-----------GH--SETIYSVCFSPNG----------ETLASGSQ 1181

Query: 190  KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI--LRVYLMDTRID 247
              S+ + +      +        ++    FSPN   +A A  +   +    + L D R +
Sbjct: 1182 DKSIRLWEVSTGQQKVKLDGHTYVINSVCFSPNGTTLASAGGNPYGLGDFIIRLWDIRNE 1241

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINIS 306
            +    +    + I +  FS +G   LIS   D  + ++  D+++     +L       +S
Sbjct: 1242 KCKILLRGHINCINSICFSYDGT-ILISGSDDNTIRVW--DVETGKQTAKLDGHRNSVMS 1298

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
               S D + +   S       +Y+       Q         +     +SP G  +A +  
Sbjct: 1299 VCLSSDGTTLASGSL---DHLIYLWDIKTEKQIAKFDGHTYAVNSVCFSPNGTTLASSNL 1355

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
                  I +   +  Q    +        +  +SP G +L        D   +L+ I
Sbjct: 1356 DNS---ISLWDINTGQLNAKLHGHTNTVCSICFSPDGNTLASVSY---DQSIRLWDI 1406



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/293 (13%), Positives = 86/293 (29%), Gaps = 55/293 (18%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++ +G   NS+ + D      +         ++   FSPN + +A  +YD      + L 
Sbjct: 791  TLATGGDDNSIRLWDVQEQEAKAKLDGHSSAVYSVCFSPNGETLASGSYDK----SIRLW 846

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            +    +    +      + +  FS NG              I   D+++    ++ +   
Sbjct: 847  NVSTGQQKAILNGHLFAVYSVCFSPNGDTLA---SGSGDKSICLWDVRTGHQTKILDGHL 903

Query: 303  INI-SASYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             N+ S  YSP+ + +              + +       Q         + +   +S  G
Sbjct: 904  NNVYSVCYSPNGTILASGGGNHFGGGDCSIRLWCVKTGQQSAQLDGHSGTVYTVCFSHDG 963

Query: 359  DLIAFTKFSG-------------EKFA--------------------------IGVMKKD 379
              +A                    KF                           I +    
Sbjct: 964  TTLASGSHDNCIRLWDIKSGLEKSKFNKHTSIVFSVCFSSDLKTLASGSWDNSILLWDFK 1023

Query: 380  GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
               ++ +++     + +  +SP G +L  S    GD   +L+++        L
Sbjct: 1024 TEHQKAILDGHTYIVNSVCFSPDGTTLASSS---GDNSIRLWNVKTGQYKAKL 1073



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/276 (12%), Positives = 83/276 (30%), Gaps = 43/276 (15%)

Query: 120  GKDRLRVEFRLWDVKDRKQ---IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                     RLW+V   +Q   + G  +                 I        G     
Sbjct: 1177 ASGSQDKSIRLWEVSTGQQKVKLDGHTYV----------------INSVCFSPNGT---- 1216

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
             L  +     G+    + + D      + L       +    FS +   +   + D+   
Sbjct: 1217 TLASAGGNPYGLGDFIIRLWDIRNEKCKILLRGHINCINSICFSYDGTILISGSDDN--- 1273

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              + + D    +   ++   R+ +++   SS+G     S   D  + ++ +       ++
Sbjct: 1274 -TIRVWDVETGKQTAKLDGHRNSVMSVCLSSDGTTLA-SGSLDHLIYLWDI----KTEKQ 1327

Query: 297  LT----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +     +T  +N S  +SP+ + +   S+ +    + +   N             +    
Sbjct: 1328 IAKFDGHTYAVN-SVCFSPNGTTLA-SSNLD--NSISLWDINTGQLNAKLHGHTNTVCSI 1383

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             +SP G+ +A   +      I +       E +   
Sbjct: 1384 CFSPDGNTLASVSYDQS---IRLWDIKTKTEIINTA 1416


>gi|300789079|ref|YP_003769370.1| hypothetical protein AMED_7252 [Amycolatopsis mediterranei U32]
 gi|299798593|gb|ADJ48968.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
          Length = 305

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 96/290 (33%), Gaps = 35/290 (12%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V    +    +  + V DR   ++R +  SR+++   P ++ + + +            +
Sbjct: 6   VPLRRLRSGQRARIRVWDRRTGSVRTVFESRERLYEAPNWTADDRLLV------NGDGML 59

Query: 240 YLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +L+       P+ +       +      + +G     S        I+ V L      R+
Sbjct: 60  WLLPADGSAPPREVPAAGLPEVNNDHVLAPDGATVFASTN---DWHIWEVPLAGGTARRV 116

Query: 298 T-NTLFINISASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           T +   ++     SPD  ++ +        D      ++ +  +G D   ++ D      
Sbjct: 117 TVDDGGMHFLHGISPDGRRLGYVRLEPRGDDWWASATIHTVGLDGQDDVAVTTD-PGPAD 175

Query: 351 DPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
              W+P G  I F       +     +  ++ DG++   L  ++     P  +P+G   +
Sbjct: 176 GCEWTPDGAWIVFNTEQFSDTPGHAQLARVRPDGTEPEQLTFDERVNWFPHVAPTGDVAV 235

Query: 406 FSRKKDGDTG--------SKLYSIDLNGRNETLINTPAYASD---PQWVG 444
           +     G TG         +L S+       TL+           P W  
Sbjct: 236 YLSYPPGTTGHPADLRVELRLVSVKAWQEPATLVVLDGGQGTINVPSWAP 285



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 90/239 (37%), Gaps = 30/239 (12%)

Query: 193 LCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           L ++  DG+      P     ++  +   +P+   V  +T D      ++ +      A 
Sbjct: 59  LWLLPADGSAPPREVPAAGLPEVNNDHVLAPDGATVFASTND----WHIWEVPLAGGTAR 114

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFIN 304
           +   +   M      S +G+R      +    D      I++V L       +T      
Sbjct: 115 RVTVDDGGMHFLHGISPDGRRLGYVRLEPRGDDWWASATIHTVGLDGQDDVAVTTDPGPA 174

Query: 305 ISASYSPDSSQIVFE----SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               ++PD + IVF     SD  G  QL  ++ +G++ ++++ D+  ++F P  +P GD+
Sbjct: 175 DGCEWTPDGAWIVFNTEQFSDTPGHAQLARVRPDGTEPEQLTFDERVNWF-PHVAPTGDV 233

Query: 361 IAFTKFSGE--------KFAIGVMKKDGSQERLLV-----EDSNLQAPTWSPSGRSLIF 406
             +  +           +  + ++     QE   +         +  P+W+P G +  F
Sbjct: 234 AVYLSYPPGTTGHPADLRVELRLVSVKAWQEPATLVVLDGGQGTINVPSWAPDGTAFAF 292



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 55/194 (28%), Gaps = 21/194 (10%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-----ILRVYLMDTRID 247
           +  +   G   R +T     + F    SP+ +++ Y   +           ++ +     
Sbjct: 103 IWEVPLAGGTARRVTVDDGGMHFLHGISPDGRRLGYVRLEPRGDDWWASATIHTVGLDGQ 162

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK----DEAMDIYSVDLQSNATERLTNTLFI 303
                +           ++ +G   + + ++         +  V       E+LT    +
Sbjct: 163 DDVA-VTTDPGPADGCEWTPDGAWIVFNTEQFSDTPGHAQLARVRPDGTEPEQLTFDERV 221

Query: 304 NISASYSPDSSQIVFESDREGKEQ-----------LYVMQSNGSDQKRISQDKEASYFDP 352
           N     +P     V+ S   G              + V          +    + +   P
Sbjct: 222 NWFPHVAPTGDVAVYLSYPPGTTGHPADLRVELRLVSVKAWQEPATLVVLDGGQGTINVP 281

Query: 353 VWSPQGDLIAFTKF 366
            W+P G   AF  +
Sbjct: 282 SWAPDGTAFAFVDY 295


>gi|332876558|ref|ZP_08444320.1| WD40-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332685525|gb|EGJ58360.1| WD40-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 501

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 88/275 (32%), Gaps = 47/275 (17%)

Query: 194 CVMDRDGANIR--YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR------------- 238
            V+  DG  ++    T S       P + P ++ +AY+                      
Sbjct: 203 TVIAYDGTLVKANLKTDSLISGGVYPAWHPTEKLIAYSVNQTGQTFHTRDLQKVEVQDML 262

Query: 239 --VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L D   +   +  G+   + + P +S +GK    +  +    D    +L +    R
Sbjct: 263 SDLILYDVEKNEVTRIPGDTDELEVFPWWSPDGKYLYYASARFVRKDTIE-NLDNETILR 321

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                +     S+ P        S R G  +L    +       +          P  SP
Sbjct: 322 YKEIKYNLFRRSFDP-------ASRRIGPPELVFDAAARGKSATL----------PRISP 364

Query: 357 QGDLIAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIF 406
            G  + FT      F I        +M     Q R + E ++       +WS +GR ++F
Sbjct: 365 DGHYLMFTLGEFGVFHIWHKDADLYLMDLRTRQVRPMTEINSDDVESYHSWSSNGRWVVF 424

Query: 407 SRKK--DGDTGSKLYSIDLNGRNETLINTPAYASD 439
           S ++     T   +  ID NG+       P    D
Sbjct: 425 SSRRYDGNYTRPFIAYIDKNGKGRKPFELPQEVPD 459



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 38/187 (20%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI---- 246
           + L + D +   +  +    D++   P +SP+ + + YA+        +  +D       
Sbjct: 263 SDLILYDVEKNEVTRIPGDTDELEVFPWWSPDGKYLYYASARFVRKDTIENLDNETILRY 322

Query: 247 ------------DRAPKRIGNF---------RSMILAPRFSSNGKRALISVQKDE----- 280
                       D A +RIG                 PR S +G   + ++ +       
Sbjct: 323 KEIKYNLFRRSFDPASRRIGPPELVFDAAARGKSATLPRISPDGHYLMFTLGEFGVFHIW 382

Query: 281 --AMDIYSVDLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDR-EGK---EQLYVMQ 332
               D+Y +DL++     +T     ++    S+S +   +VF S R +G      +  + 
Sbjct: 383 HKDADLYLMDLRTRQVRPMTEINSDDVESYHSWSSNGRWVVFSSRRYDGNYTRPFIAYID 442

Query: 333 SNGSDQK 339
            NG  +K
Sbjct: 443 KNGKGRK 449


>gi|209963730|ref|YP_002296645.1| prolyl oligopeptidase family protein, putative [Rhodospirillum
           centenum SW]
 gi|209957196|gb|ACI97832.1| prolyl oligopeptidase family protein, putative [Rhodospirillum
           centenum SW]
          Length = 667

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 93/256 (36%), Gaps = 11/256 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMD 243
             G  +  L   D     +  LT  + +      +S    ++A+A+   D     VY+  
Sbjct: 134 RGGSEQFQLFRQDLKTGAVAMLTDGKSRNQGL-LWSSKGDRIAFASTRRDGRNTDVYVAT 192

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLF 302
                  + +           +S++  R L+          ++ VD+++    R+     
Sbjct: 193 PEQAATVQPLVAETGSWGPVAWSADDGRLLVGKSISVARSQLWVVDVKTGEKTRV-KPEM 251

Query: 303 INISAS---YSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            ++  S   ++PD   +V  SD  G+ ++L +    G   + IS+++     +   S  G
Sbjct: 252 DDVHLSGVGFTPDGKGVVLVSDEAGEFKRLGIYDLAGGKTRWISEEQPWDVEEAELSHDG 311

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            L+A+T        + ++     +     +     +    +SP G  L  S  +     S
Sbjct: 312 RLLAYTVNEAGYSTLHLLDMTSLKPLPAADLPKGTVGGLRFSPDGTRLAVSVSRP-TAPS 370

Query: 417 KLYSIDLNGRNETLIN 432
            ++ +D+ GR  T   
Sbjct: 371 DVFVVDIAGRTVTQWT 386



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 82/224 (36%), Gaps = 13/224 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR--ALISV 276
           ++ +   +  +T   E      +M      A +++      I + R S        + S 
Sbjct: 75  WTADGAGLLISTRFGETNQLHLVMQPL--GARQQLTFKEEPITSGRLSPRAGSADLIYSW 132

Query: 277 QKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQ 332
            +  +    ++  DL++ A   LT+    N    +S    +I F S R       +YV  
Sbjct: 133 DRGGSEQFQLFRQDLKTGAVAMLTDGKSRNQGLLWSSKGDRIAFASTRRDGRNTDVYVAT 192

Query: 333 SNGSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDGSQERLL---VE 388
              +   +    +  S+    WS   G L+     S  +  + V+     ++  +   ++
Sbjct: 193 PEQAATVQPLVAETGSWGPVAWSADDGRLLVGKSISVARSQLWVVDVKTGEKTRVKPEMD 252

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           D +L    ++P G+ ++    + G+   +L   DL G     I+
Sbjct: 253 DVHLSGVGFTPDGKGVVLVSDEAGEF-KRLGIYDLAGGKTRWIS 295



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 88/237 (37%), Gaps = 12/237 (5%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQK--VAYATYDDEDILRVYLMDTRIDRAPKR 252
           VM   GA  +     +++ +   R SP      + Y+                   A   
Sbjct: 97  VMQPLGARQQLTF--KEEPITSGRLSPRAGSADLIYSWDRGGSEQFQLFRQDLKTGAVAM 154

Query: 253 IGNFRSMILAPRFSSNGKRALI-SVQKDE-AMDIYSVDLQSNATERLTNTLFINISA-SY 309
           + + +S      +SS G R    S ++D    D+Y    +  AT +       +    ++
Sbjct: 155 LTDGKSRNQGLLWSSKGDRIAFASTRRDGRNTDVYVATPEQAATVQPLVAETGSWGPVAW 214

Query: 310 SPD-SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFS 367
           S D    +V +S    + QL+V+     ++ R+  + +  +   V ++P G  +      
Sbjct: 215 SADDGRLLVGKSISVARSQLWVVDVKTGEKTRVKPEMDDVHLSGVGFTPDGKGVVLVSDE 274

Query: 368 GEKF-AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +F  +G+    G + R + E    +++    S  GR L ++  + G +   L  +
Sbjct: 275 AGEFKRLGIYDLAGGKTRWISEEQPWDVEEAELSHDGRLLAYTVNEAGYSTLHLLDM 331



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 55/373 (14%), Positives = 115/373 (30%), Gaps = 45/373 (12%)

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S   +  +  +      +     +FQ +     Q L TG V      + R +  LW  K 
Sbjct: 116 SGRLSPRAGSADLIYSWDRGGSEQFQLFR----QDLKTGAVAMLTDGKSRNQGLLWSSKG 171

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-----VSGIIK 190
            +            +   +A        Q +  E G +        +          + +
Sbjct: 172 DRIAFASTRRDGRNTDVYVATPEQAATVQPLVAETGSWGPVAWSADDGRLLVGKSISVAR 231

Query: 191 NSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + L V+D   G   R      D  L    F+P+ + V   + +  +  R+ + D    + 
Sbjct: 232 SQLWVVDVKTGEKTRVKPEMDDVHLSGVGFTPDGKGVVLVSDEAGEFKRLGIYDLAGGKT 291

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINIS 306
                     +     S +G+    +V +     ++ +D+ S   + L            
Sbjct: 292 RWISEEQPWDVEEAELSHDGRLLAYTVNEAGYSTLHLLDMTS--LKPLPAADLPKGTVGG 349

Query: 307 ASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             +SPD +++     R      ++V+   G    + ++ +        ++    L+ +  
Sbjct: 350 LRFSPDGTRLAVSVSRPTAPSDVFVVDIAGRTVTQWTRSEVGGLNTDSFA-DATLVQYPT 408

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           F          K DG   ++                    F  K  G +G     ID++G
Sbjct: 409 FD---------KVDGKPRQIP------------------AFVYKPQGASGKLPVIIDIHG 441

Query: 426 RNETLINTPAYAS 438
             E     P+++S
Sbjct: 442 GPEGQTR-PSFSS 453


>gi|298241361|ref|ZP_06965168.1| hypothetical protein Krac_9705 [Ktedonobacter racemifer DSM 44963]
 gi|297554415|gb|EFH88279.1| hypothetical protein Krac_9705 [Ktedonobacter racemifer DSM 44963]
          Length = 539

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 77/217 (35%), Gaps = 17/217 (7%)

Query: 218 RFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRAL 273
            +S + + +A         +    + + +    ++   +       ++   +S +G    
Sbjct: 305 AWSADGKSIASVYSSGAGADGPAVIQIWNPFTGKSSTSLTTEPGWSISDISWSPDGAEIT 364

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYV 330
            S+     +    V + +  T ++     +N   I + + P S  + F    +G     V
Sbjct: 365 ASMSNSGNLPQSQVQVWNVQTRQVVFQQSMNQYVIGSIWQPGSHNLAFSLLPDGSYNAAV 424

Query: 331 MQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE- 388
           +Q  N   ++RI      +     WSP G  IA+    G     GV   D +  + +   
Sbjct: 425 LQIWNVQTKQRIKTFAGIAANTMAWSPDGKEIAYDNRVGGGHTAGVTILDSNTGQKVYTY 484

Query: 389 --------DSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                     N+  P WSP G+ ++ S     +T SK
Sbjct: 485 SVSAKANQSVNISVPAWSPDGKYIVTSESTVSNTPSK 521



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 84/272 (30%), Gaps = 28/272 (10%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V+  +G N + +T  R   +     +P     A +       + +             +
Sbjct: 239 RVLIVNGQNGKIVTSYRANSIAS---TPTGTVSAVSASTALTSVELPATKMSTLSYRLPL 295

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-----DLQSNATERLTNTLFINISA- 307
            +  S   +  +S++GK            D  +V          ++  LT     +IS  
Sbjct: 296 SSAPSF-RSIAWSADGKSIASVYSSGAGADGPAVIQIWNPFTGKSSTSLTTEPGWSISDI 354

Query: 308 SYSPDSSQIVFESDREGK---EQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIA 362
           S+SPD ++I       G     Q+ V        +++   +  + +    +W P    +A
Sbjct: 355 SWSPDGAEITASMSNSGNLPQSQVQVWNV---QTRQVVFQQSMNQYVIGSIWQPGSHNLA 411

Query: 363 FTKFSGEKFA---IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           F+      +    + +      Q              WSP G+ + +  +  G   + + 
Sbjct: 412 FSLLPDGSYNAAVLQIWNVQTKQRIKTFAGIAANTMAWSPDGKEIAYDNRVGGGHTAGVT 471

Query: 420 SIDLNGRNETLI-------NTPAYASDPQWVG 444
            +D N   +          N     S P W  
Sbjct: 472 ILDSNTGQKVYTYSVSAKANQSVNISVPAWSP 503



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 72/233 (30%), Gaps = 29/233 (12%)

Query: 95  DSIPRFQ--DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
            S P F+   W++ G + + +      G D   V  ++W+    K        ++   W 
Sbjct: 296 SSAPSFRSIAWSADG-KSIASVYSSGAGADGPAV-IQIWNPFTGK---SSTSLTTEPGW- 349

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
                       SI+      +   +  S S    + ++ + V +           S +Q
Sbjct: 350 ------------SISDISWSPDGAEITASMSNSGNLPQSQVQVWNV-QTRQVVFQQSMNQ 396

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +    + P    +A++   D       L    +    +             +S +GK  
Sbjct: 397 YVIGSIWQPGSHNLAFSLLPDGSYNAAVLQIWNVQTKQRIKTFAGIAANTMAWSPDGKEI 456

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTL-------FINIS-ASYSPDSSQIV 317
               +           L SN  +++            +NIS  ++SPD   IV
Sbjct: 457 AYDNRVGGGHTAGVTILDSNTGQKVYTYSVSAKANQSVNISVPAWSPDGKYIV 509



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 59/184 (32%), Gaps = 33/184 (17%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK--FFSSPASWRKIAHTIS 159
            W+  GA+  +T  +   G +  + + ++W+V+ R+ +  +    +   + W+  +H ++
Sbjct: 355 SWSPDGAE--ITASMSNSG-NLPQSQVQVWNVQTRQVVFQQSMNQYVIGSIWQPGSHNLA 411

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
                               +            +  +       + +            +
Sbjct: 412 ------------------FSLLPDGSYNAAVLQIWNV----QTKQRIKTFAGIAANTMAW 449

Query: 220 SPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-----PRFSSNGKRAL 273
           SP+ +++AY           V ++D+   +             +     P +S +GK  +
Sbjct: 450 SPDGKEIAYDNRVGGGHTAGVTILDSNTGQKVYTYSVSAKANQSVNISVPAWSPDGKYIV 509

Query: 274 ISVQ 277
            S  
Sbjct: 510 TSES 513



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 66/191 (34%), Gaps = 24/191 (12%)

Query: 268 NGKRALISVQKD---EAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVF-ES 320
           +G+R               +   D  +        L     ++I  ++SP S  +    S
Sbjct: 178 DGQRVAAVRNGTNAIGGGTVEIWDALTGLHRVNLELNPNEVLSIPQAWSPKSELLAVATS 237

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKD 379
           +R       V+  NG + K ++            +P G + A +  +      +   K  
Sbjct: 238 ER-------VLIVNGQNGKIVT---SYRANSIASTPTGTVSAVSASTALTSVELPATKMS 287

Query: 380 GSQERL-LVEDSNLQAPTWSPSGRSLI--FSR--KKDGDTGSKLYSIDLNGRNETLINTP 434
               RL L    + ++  WS  G+S+   +S     DG    ++++      + +L   P
Sbjct: 288 TLSYRLPLSSAPSFRSIAWSADGKSIASVYSSGAGADGPAVIQIWNPFTGKSSTSLTTEP 347

Query: 435 AYA-SDPQWVG 444
            ++ SD  W  
Sbjct: 348 GWSISDISWSP 358


>gi|94495659|ref|ZP_01302239.1| peptidase S9, prolyl oligopeptidase active site region
           [Sphingomonas sp. SKA58]
 gi|94425047|gb|EAT10068.1| peptidase S9, prolyl oligopeptidase active site region
           [Sphingomonas sp. SKA58]
          Length = 675

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 82/287 (28%), Gaps = 64/287 (22%)

Query: 217 PRFSPNQQKVAYATYD-----DEDILRVYLMDT-RIDRAPKRIGNFRSMILA-PRFSSNG 269
           P  SP+ + +AY         +     +YL+   R  + P++I +      A P FS +G
Sbjct: 38  PAVSPDGKWLAYQLRSTDLAANRGRTDLYLLAIDRPGQTPRKIASVADKNEASPVFSPDG 97

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------- 322
                         ++ V L      +++           SPD  ++   +DR       
Sbjct: 98  SALYFQSDASGDDQLWRVALSGGDPVQISKAPGGISGFLLSPDGMKVALWADRPVGAKTL 157

Query: 323 ------------------------------EGKEQLYVMQSNGSDQKRISQD-------- 344
                                           + Q++VM   G     +           
Sbjct: 158 DDVKPTAPADAGSGRVYEQLFVRHWDTWSDGQRSQIFVMPIAGGPAVSVMGGLVGDSPSK 217

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFA-------IGVMKKDGS-QERLLVE--DSNLQA 394
                 +  WS  G  + F      +         I     DGS     L +  D+    
Sbjct: 218 PFGGAEEIAWSRDGKTLFFALREAGRIEPLSTNLDIFSTPADGSAAPTNLTDANDATDTM 277

Query: 395 PTWSPSGRSLIFSR-KKDGDTGSKLYSIDLN-GRNETLINTPAYASD 439
           P  SP G+ L ++  K+ G    +L     N    ET   T  +   
Sbjct: 278 PAVSPDGQWLAYAAMKRPGYEADRLVLTLRNIATGETRALTEGWDRS 324



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 69/233 (29%), Gaps = 20/233 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S  Q+   +            +     D   K  G    +     +S +GK    +++
Sbjct: 184 TWSDGQRSQIFVMPIAGGPAVSVMGGLVGDSPSKPFGGAEEI----AWSRDGKTLFFALR 239

Query: 278 KDE-------AMDIYSVDLQSNA-TERLTN-TLFINISASYSPDSSQIVFES-DREGKEQ 327
           +          +DI+S     +A    LT+     +   + SPD   + + +  R G E 
Sbjct: 240 EAGRIEPLSTNLDIFSTPADGSAAPTNLTDANDATDTMPAVSPDGQWLAYAAMKRPGYEA 299

Query: 328 LYVM----QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             ++         + + +++  + S     W+  G  +  T        +  +     + 
Sbjct: 300 DRLVLTLRNIATGETRALTEGWDRSVGSIAWAADGKSLLVTANDVLDNPVFRVDAALGKV 359

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             L    +  +    P G  +              + +   G+   L    A 
Sbjct: 360 TRLTGKGHAGSVIPLPQGGFVYALDSIQSPADF--WKMPARGKPVRLTRVNAD 410



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 51/157 (32%), Gaps = 7/157 (4%)

Query: 192 SLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRI 246
            +     DG A    LT + D     P  SP+ Q +AYA         D L + L +   
Sbjct: 252 DIFSTPADGSAAPTNLTDANDATDTMPAVSPDGQWLAYAAMKRPGYEADRLVLTLRNIAT 311

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                    +   + +  ++++GK  L++        ++ VD       RLT       S
Sbjct: 312 GETRALTEGWDRSVGSIAWAADGKSLLVTANDVLDNPVFRVDAALGKVTRLT-GKGHAGS 370

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
               P     V+  D       +          R+++
Sbjct: 371 VIPLPQGG-FVYALDSIQSPADFWKMPARGKPVRLTR 406


>gi|282901415|ref|ZP_06309340.1| WD-40 repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281193694|gb|EFA68666.1| WD-40 repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 1341

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 108/287 (37%), Gaps = 27/287 (9%)

Query: 162  IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            I Q    E G  +       +S+ +G    +  + +  G NI+      +  +    FSP
Sbjct: 835  IQQFRGHEGGITSVCFSPDGQSIGTGSEDGTARLWNLQGKNIQQ-FRGHEGGVTSICFSP 893

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + Q +   + D     R++ +        ++       + +  FS +G + L +   D+ 
Sbjct: 894  DGQSIGTGSED--GTARLWNLQ---GENIQQFHGHEDWVTSVSFSPDG-QILATTSVDKT 947

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            + ++  +LQ    ++         S S+SPD   +   S     +   +    G   ++ 
Sbjct: 948  VRLW--NLQGETIQQFHGHENWVTSVSFSPDGKTLATTSV---DKTARLWNLQGETIQQF 1002

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                E       +SP G  +A T         G+ ++   + R    +  + + ++SP G
Sbjct: 1003 -HGHENWVTSVSFSPDGKTLATTSVDKTARLWGLHRQKIQEIR--GHEDWVTSVSFSPDG 1059

Query: 402  RSLIFSRKKDGDTGSKLYSIDLNGR-------NETLINTPAYASDPQ 441
            +++    +   D  ++L+  +  GR       +++ + +  ++ D Q
Sbjct: 1060 QNIATGSR---DNTARLW--NWEGRLIQEFKGHQSRVTSVNFSPDGQ 1101



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 16/206 (7%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +    +  +    FSP+ Q +   ++D      + L + R     ++       + + 
Sbjct: 753 RNIIKGHEGGITSVCFSPDGQSIGTGSWDK----TIRLWNLR-GENIQQFRGHEGGVTSI 807

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G+    +  +D    ++  +LQ    ++         S  +SPD   I      +
Sbjct: 808 CFSPDGQSIG-TGSEDGTARLW--NLQGKNIQQFRGHEGGITSVCFSPDGQSIG-TGSED 863

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  +L+     G + ++  +  E       +SP G  I      G      +    G   
Sbjct: 864 GTARLW--NLQGKNIQQF-RGHEGGVTSICFSPDGQSIGTGSEDGTA---RLWNLQGENI 917

Query: 384 RLLVEDSNL-QAPTWSPSGRSLIFSR 408
           +      +   + ++SP G+ L  + 
Sbjct: 918 QQFHGHEDWVTSVSFSPDGQILATTS 943



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 87/228 (38%), Gaps = 23/228 (10%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ +G    +  + +  G +I       +  +    FSPN Q +A  + D   I R++ 
Sbjct: 1101 QTIGTGSADKTARLWNLQG-DILGEFQGHEDWVTSVSFSPNGQILATGSRD--KIARLWS 1157

Query: 242  MDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            +          +G F      + +  FS NG+    +   D+   ++  +LQ +   +  
Sbjct: 1158 LQGD------LLGEFPGHEDWVTSVSFSPNGQTLA-TGSADKIARLW--NLQGDLLGKFP 1208

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   S S+SPD   +V  S     +++  + +      R  +  ++   +  +SP G
Sbjct: 1209 GHEGGVTSVSFSPDGQTLVTGS----VDKIARLWNLNGYLIREFKGHDSGITNVSFSPDG 1264

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
              +A          + +    G   +     D  + + ++SP G++L 
Sbjct: 1265 QTLATASVDKT---VRLWDLKGQLIQEFKGYDDTVTSVSFSPDGQTLA 1309



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 99/254 (38%), Gaps = 29/254 (11%)

Query: 164  QSITGEKG--DFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            Q I   +G  D+ + + F    +++ +G   N+  + + +G  I+     + ++     F
Sbjct: 1038 QKIQEIRGHEDWVTSVSFSPDGQNIATGSRDNTARLWNWEGRLIQEFKGHQSRVTSV-NF 1096

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISV 276
            SP+ Q +   + D     R++ +   I      +G F+     + +  FS NG + L + 
Sbjct: 1097 SPDGQTIGTGSAD--KTARLWNLQGDI------LGEFQGHEDWVTSVSFSPNG-QILATG 1147

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +D+   ++S  LQ +             S S+SP+   +   S     +++  + +   
Sbjct: 1148 SRDKIARLWS--LQGDLLGEFPGHEDWVTSVSFSPNGQTLATGS----ADKIARLWNLQG 1201

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-VMKKDGSQERLLV-EDSNLQA 394
            D        E       +SP G  +     +G    I  +   +G   R     DS +  
Sbjct: 1202 DLLGKFPGHEGGVTSVSFSPDGQTLV----TGSVDKIARLWNLNGYLIREFKGHDSGITN 1257

Query: 395  PTWSPSGRSLIFSR 408
             ++SP G++L  + 
Sbjct: 1258 VSFSPDGQTLATAS 1271



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 73/201 (36%), Gaps = 18/201 (8%)

Query: 233 DEDILRVYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              +  +Y ++T +D    R  I      I +  FS +G+    +   D+ + ++  +L+
Sbjct: 734 YPTVRPIYTLNTILDTISDRNIIKGHEGGITSVCFSPDGQSIG-TGSWDKTIRLW--NLR 790

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
               ++         S  +SPD   I      +G  +L+     G + ++  +  E    
Sbjct: 791 GENIQQFRGHEGGVTSICFSPDGQSIG-TGSEDGTARLW--NLQGKNIQQF-RGHEGGIT 846

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
              +SP G  I      G      +    G   +     +  + +  +SP G+S+     
Sbjct: 847 SVCFSPDGQSIGTGSEDGTA---RLWNLQGKNIQQFRGHEGGVTSICFSPDGQSI---GT 900

Query: 410 KDGDTGSKLYSIDLNGRNETL 430
              D  ++L+  +L G N   
Sbjct: 901 GSEDGTARLW--NLQGENIQQ 919


>gi|256374817|ref|YP_003098477.1| peptidase S41 [Actinosynnema mirum DSM 43827]
 gi|255919120|gb|ACU34631.1| peptidase S41 [Actinosynnema mirum DSM 43827]
          Length = 1069

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 67/197 (34%), Gaps = 33/197 (16%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G       + D    ++   L      R++       +  +SPD + + + S R+G  ++
Sbjct: 25  GDLVTFVAEDD----VWLAPLDGGRAWRVSADQVRASTPRFSPDGAHLAWTSHRDGAPEV 80

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---SGEKFAIGVMKKDGS---- 381
           +     G   +R++   + +     W+P G ++A +     +G +     +  DG     
Sbjct: 81  HAAPVLGGPARRLTHWGDYTTGVRTWTPDGRVVAVSTTGQATGNREWAHAVPLDGGPSEK 140

Query: 382 -------------QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                          ++L   +  + P W        + R + G        ++  G   
Sbjct: 141 LPYGWVGGVAYGPDRQVLTSSAAGRDPAW--------WKRYRGGTAAKLWVDVEGGGEFT 192

Query: 429 TLIN-TPAYASDPQWVG 444
            ++    +  + P WVG
Sbjct: 193 RVLPELTSPLTSPMWVG 209



 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 90/269 (33%), Gaps = 32/269 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +   DG    +   +       PRFSP+   +A+ ++ D            +    +
Sbjct: 35  DVWLAPLDGGRA-WRVSADQVRASTPRFSPDGAHLAWTSHRDGAPE--VHAAPVLGGPAR 91

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTNTLFINISA 307
           R+ ++       R ++ +G+   +S            ++V L    +E+L          
Sbjct: 92  RLTHWGDYTTGVRTWTPDGRVVAVSTTGQATGNREWAHAVPLDGGPSEKL--PYGWVGGV 149

Query: 308 SYSPD---------SSQIVFE-SDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +Y PD              +    R G   +L+V    G +  R+  +  +    P+W  
Sbjct: 150 AYGPDRQVLTSSAAGRDPAWWKRYRGGTAAKLWVDVEGGGEFTRVLPELTSPLTSPMWV- 208

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            GD IAF        ++     DG   R         A   +  GR +++          
Sbjct: 209 -GDRIAFLSDHEGVGSVYSALPDGGDLRRHTHQEFFYARAATTDGRRVVY------QCAG 261

Query: 417 KLYSID-LNGRNETL---INTPAYASDPQ 441
           +L+ +D L+     L   +  P  A  P+
Sbjct: 262 ELWLLDGLDAEPRRLDVVLAGPRTARTPR 290



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 58/182 (31%), Gaps = 13/182 (7%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT----ERL-TNTLFINISASYSPDSSQIVFESDRE 323
           G   +     D    +    +          R+ T  L   +  + SPD  ++   +  +
Sbjct: 344 GDTVVWVTDADGEEALEFSPVGGREPGAAPRRVATGELGRVLELAASPDGRKLA-VATHD 402

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKK-DGS 381
           G  +L ++     + + +         D V+SP    +A+ +        I +    D  
Sbjct: 403 G--RLLLVDVESGEVREVLSGANPHVDDLVFSPDSHWLAWAQPGPSPLQHIRMANTEDLV 460

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLINTPAYAS 438
              +     +  +P ++  GR L F   +  D     +  DL    G    L+   A   
Sbjct: 461 PVDVTPLRFSDFSPAFTEDGRHLAFLSVRSFDPVYDAHVFDLSFPTGCRPHLVPLAATTP 520

Query: 439 DP 440
            P
Sbjct: 521 SP 522



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 20/160 (12%)

Query: 180 VSESVVSGIIKNSLCVMDRDG---------------ANIRYLTPSRDQILFEPRFSPNQQ 224
           V   +   +    + V D DG               A  R +       + E   SP+ +
Sbjct: 335 VRARLPRVLGDTVVWVTDADGEEALEFSPVGGREPGAAPRRVATGELGRVLELAASPDGR 394

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           K+A AT+D     R+ L+D       + +      +    FS +      +      +  
Sbjct: 395 KLAVATHDG----RLLLVDVESGEVREVLSGANPHVDDLVFSPDSHWLAWAQPGPSPLQH 450

Query: 285 YSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             + + +      +T   F + S +++ D   + F S R 
Sbjct: 451 IRMANTEDLVPVDVTPLRFSDFSPAFTEDGRHLAFLSVRS 490



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 85/251 (33%), Gaps = 35/251 (13%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA----- 229
            RI F+S+    G + ++L     DG ++R    +  +  +    + + ++V Y      
Sbjct: 210 DRIAFLSDHEGVGSVYSAL----PDGGDLRR--HTHQEFFYARAATTDGRRVVYQCAGEL 263

Query: 230 -----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
                   +   L V L   R  R P+ +              +      +V+      +
Sbjct: 264 WLLDGLDAEPRRLDVVLAGPRTARTPRHVAPSPDDA-----HPDRTGRASAVEVRGT--V 316

Query: 285 YSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ----K 339
           + V  +      L     +             +V+ +D +G+E L      G +     +
Sbjct: 317 HWVTHRDGPVRALAEEPGVRARLPRVL--GDTVVWVTDADGEEALEFSPVGGREPGAAPR 374

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TW 397
           R++  +     +   SP G  +A     G    + ++  +  + R ++  +N       +
Sbjct: 375 RVATGELGRVLELAASPDGRKLAVATHDG---RLLLVDVESGEVREVLSGANPHVDDLVF 431

Query: 398 SPSGRSLIFSR 408
           SP    L +++
Sbjct: 432 SPDSHWLAWAQ 442


>gi|153868033|ref|ZP_01998164.1| WD-40 repeat protein [Beggiatoa sp. SS]
 gi|152144647|gb|EDN71836.1| WD-40 repeat protein [Beggiatoa sp. SS]
          Length = 261

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 73/212 (34%), Gaps = 20/212 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    FSP+  ++A A++D+       L + +  +  + +    S +L   
Sbjct: 53  QTLRGHTSSVLHAAFSPDGGRLATASWDN----TARLWEVKSGKLIQTLRGHTSSVLHAA 108

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G R   +   D+   ++  D++S    + L         A++SPD  ++   S   
Sbjct: 109 FSPDGGRLA-TASFDQTARLW--DVKSGKLIQTLRGHEAEVWHAAFSPDGGRLATASF-- 163

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             +   +         +  +  EA  +   +SP GD +A   F        +      + 
Sbjct: 164 -DQTARLWDVKSGKLIQTLRGHEAEVWHAAFSPNGDRLATASFDQTA---RLWDVKSGKL 219

Query: 384 RLLVEDSNLQAP----TWSPSGRSLIFSRKKD 411
              +     + P     +SP G  L  +    
Sbjct: 220 IQTLRG--HEEPVLHAAFSPDGGRLATASWDG 249



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 86/257 (33%), Gaps = 37/257 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
                +  D      RLW+VK+ K I   +            HT S  ++ + + + G  
Sbjct: 30  AGWQPQAGDN---TARLWEVKNGKLIQTLR-----------GHT-SSVLHAAFSPDGG-- 72

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     + +    N+  + +     +          +    FSP+  ++A A++D 
Sbjct: 73  ---------RLATASWDNTARLWEVKSGKLIQTLRGHTSSVLHAAFSPDGGRLATASFDQ 123

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                  L D +  +  + +    + +    FS +G R   +   D+   ++  D++S  
Sbjct: 124 ----TARLWDVKSGKLIQTLRGHEAEVWHAAFSPDGGRLA-TASFDQTARLW--DVKSGK 176

Query: 294 TER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             + L         A++SP+  ++   S     +   +         +  +  E      
Sbjct: 177 LIQTLRGHEAEVWHAAFSPNGDRLATASF---DQTARLWDVKSGKLIQTLRGHEEPVLHA 233

Query: 353 VWSPQGDLIAFTKFSGE 369
            +SP G  +A   + G 
Sbjct: 234 AFSPDGGRLATASWDGT 250



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 80/231 (34%), Gaps = 10/231 (4%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N + ++ S    LF     P  Q  A             L + +  +  + +    S 
Sbjct: 3   GQNGQTVSNSPGAYLFCQAAPPLVQMAA-GWQPQAGDNTARLWEVKNGKLIQTLRGHTSS 61

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +L   FS +G R   +   D    ++ V       + L       + A++SPD  ++   
Sbjct: 62  VLHAAFSPDGGRLA-TASWDNTARLWEV-KSGKLIQTLRGHTSSVLHAAFSPDGGRLATA 119

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     +   +         +  +  EA  +   +SP G  +A   F      +  +K  
Sbjct: 120 SF---DQTARLWDVKSGKLIQTLRGHEAEVWHAAFSPDGGRLATASFDQTA-RLWDVKSG 175

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
              + L   ++ +    +SP+G  L  +     D  ++L+ +      +TL
Sbjct: 176 KLIQTLRGHEAEVWHAAFSPNGDRLATAS---FDQTARLWDVKSGKLIQTL 223



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 76/201 (37%), Gaps = 32/201 (15%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLW+VK  K I   +            HT S  ++ + + + G            + +  
Sbjct: 84  RLWEVKSGKLIQTLR-----------GHT-SSVLHAAFSPDGG-----------RLATAS 120

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              +  + D     +       +  ++   FSP+  ++A A++D        L D +  +
Sbjct: 121 FDQTARLWDVKSGKLIQTLRGHEAEVWHAAFSPDGGRLATASFDQ----TARLWDVKSGK 176

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISA 307
             + +    + +    FS NG R   +   D+   ++  D++S    + L       + A
Sbjct: 177 LIQTLRGHEAEVWHAAFSPNGDRLA-TASFDQTARLW--DVKSGKLIQTLRGHEEPVLHA 233

Query: 308 SYSPDSSQIVFESDREGKEQL 328
           ++SPD  ++   +  +G  +L
Sbjct: 234 AFSPDGGRLA-TASWDGTARL 253


>gi|320335214|ref|YP_004171925.1| peptidase S9, prolyl oligopeptidase active site region protein
           [Deinococcus maricopensis DSM 21211]
 gi|319756503|gb|ADV68260.1| peptidase S9, prolyl oligopeptidase active site region protein
           [Deinococcus maricopensis DSM 21211]
          Length = 691

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 77/235 (32%), Gaps = 32/235 (13%)

Query: 216 EPRFSPNQQKVAYATYD-------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           +P+ SP+ Q+ A+   D       +   +R        D    R   F     APR+S +
Sbjct: 64  DPQVSPDGQRAAFVLTDVHDTGTKERPAMRYRARLHLADGHGTRPLTFGDTDRAPRWSPD 123

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G        + +   ++ + L     E++T+       A +SPD   + F S   G  + 
Sbjct: 124 GTTLAF--LRGQPAQLHLLPLAGGEAEKVTDLPGSVGDAQWSPDGEHLAFLS---GAGRD 178

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
                     +R+S       +                +    A+ V+     + R L  
Sbjct: 179 EHADDEARVAERLSYRFNGLGW---------------RTDVCRAVHVLNVRTREVRTLHM 223

Query: 388 EDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
               ++   W P GR L+ +      +D    + L ++ L+G     +       
Sbjct: 224 PPFEVRDFAWWPDGRGLLLATASDEAQDARGHADLVTVTLDGTPGETVAWGGSVG 278



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 41/106 (38%), Gaps = 15/106 (14%)

Query: 350 FDPVWSPQGDLIAFT----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            DP  SP G   AF           +    ++   +   DG   R L      +AP WSP
Sbjct: 63  SDPQVSPDGQRAAFVLTDVHDTGTKERPAMRYRARLHLADGHGTRPLTFGDTDRAPRWSP 122

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
            G +L F R +     ++L+ + L G   E + + P    D QW  
Sbjct: 123 DGTTLAFLRGQP----AQLHLLPLAGGEAEKVTDLPGSVGDAQWSP 164


>gi|319901291|ref|YP_004161019.1| hypothetical protein Bache_1428 [Bacteroides helcogenes P 36-108]
 gi|319416322|gb|ADV43433.1| hypothetical protein Bache_1428 [Bacteroides helcogenes P 36-108]
          Length = 494

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 92/263 (34%), Gaps = 58/263 (22%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------- 278
               +    + + + +I +   +     S ++ P +  +GK    SV             
Sbjct: 190 HVRSKHAGTILVNNGKITKIDTKTDQTISSLVYPYWHPSGKFITFSVNDTKQLFHTHNPN 249

Query: 279 -----DEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                D   D+   D+  N      +L +        ++SPD  ++ F        +L +
Sbjct: 250 RVEVLDRQSDVVVYDVLKNELITAPQLFDKEVFETFPTFSPDGKRLYFC-----TAKLRI 304

Query: 331 MQSNGSDQK----RISQDKE------------------ASYFDPVWSPQGDLIAFTKFSG 368
           M +     +     I+ D +                   S   P  SP G+ + FTK + 
Sbjct: 305 MPNEYDKVRYSLCSIAFDADSRSFGEKVDTLYNAEKEGGSVSFPRVSPDGNYLMFTKAAY 364

Query: 369 EKFAIGVMKKDG------SQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKL 418
             F+I     D         E+  ++++N ++     +WS + R ++FS ++     ++L
Sbjct: 365 GNFSIWHQDADLWMIDLKRHEKHALDEANSESVESYHSWSSNSRWVVFSSRRGDGLYTRL 424

Query: 419 YS--IDLNGRNETLINTPAYASD 439
           Y   +D +GR       P  + D
Sbjct: 425 YLAYVDADGRIHKPFVLPQKSGD 447



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 73/208 (35%), Gaps = 31/208 (14%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGNF-- 256
            ++     P FSP+ +++ + T     +   Y            D       +++     
Sbjct: 278 DKEVFETFPTFSPDGKRLYFCTAKLRIMPNEYDKVRYSLCSIAFDADSRSFGEKVDTLYN 337

Query: 257 ----RSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERL--TNTLFI 303
                  +  PR S +G   + +              D++ +DL+ +    L   N+  +
Sbjct: 338 AEKEGGSVSFPRVSPDGNYLMFTKAAYGNFSIWHQDADLWMIDLKRHEKHALDEANSESV 397

Query: 304 NISASYSPDSSQIVFESDREGK--EQLYV--MQSNGSDQKR--ISQDKEASYFDPVWSPQ 357
               S+S +S  +VF S R      +LY+  + ++G   K   + Q     Y   ++S  
Sbjct: 398 ESYHSWSSNSRWVVFSSRRGDGLYTRLYLAYVDADGRIHKPFVLPQKSGDFYDKCMYSYN 457

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERL 385
              +         + +    ++GS +++
Sbjct: 458 IPELVKGSVEVGNYRLVEQVREGSLQKV 485


>gi|241761275|ref|ZP_04759363.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Zymomonas mobilis subsp. mobilis ATCC 10988]
 gi|241374182|gb|EER63679.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Zymomonas mobilis subsp. mobilis ATCC 10988]
          Length = 739

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 81/249 (32%), Gaps = 28/249 (11%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           + P FSP+ Q + Y + +      ++L        P+++   +  I    +S NG+    
Sbjct: 188 YNPVFSPDGQSLVYISKN-----SLWLYKRDSQTPPQKLFTIKGHIRDLSWSPNGQSLAF 242

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
              + +   I    + S   E L      ++   +SPDS ++ F    E  + +      
Sbjct: 243 VDDRIDHGFIALYRITSGQLEYLPAAFGNDLFPVFSPDSQKLAFIRAYEPPQSISSPDRE 302

Query: 335 GSDQKRISQDKEASYFDPVW-SPQG------------------DLIAFTKFSGEKFAIGV 375
                 I  D         W +P+G                  + I F         I  
Sbjct: 303 KGWWSLIIADINDLTLTEKWHAPKGQGEAYAGTRHQNLYWTEQNQILFPWEQDGWLHIYS 362

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNG-RNETLIN 432
           +  D  +   L+     +   +        LI+S  +D      L++  L+  + E L +
Sbjct: 363 LNPDNGKVSPLM-QGAFEVEQFIVDKAKNRLIYSANRDNRDHYSLWARSLSSEKTERLGS 421

Query: 433 TPAYASDPQ 441
             + A  P 
Sbjct: 422 QESLAFQPA 430



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 15/159 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRV-------YLMDTRIDRAPKRIGNFRSMILA----PRFS 266
            FSP+  ++AY    D +                        + +    I+A    P FS
Sbjct: 134 TFSPDDSQLAYVRGGDPEFPDAPPPNPTFQPQAPEATIHLIDLTSASDNIIASGYNPVFS 193

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+  +   +   ++ +Y  D Q+   ++L          S+SP+   + F  DR    
Sbjct: 194 PDGQSLVYISKN--SLWLYKRDSQT-PPQKLFTIKGHIRDLSWSPNGQSLAFVDDRIDHG 250

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            + + +      + +      +   PV+SP    +AF +
Sbjct: 251 FIALYRITSGQLEYL-PAAFGNDLFPVFSPDSQKLAFIR 288



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 61/153 (39%), Gaps = 23/153 (15%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-----------ISQDKE---ASYFDPV 353
           ++SPD SQ+ +   R G  +           +            ++   +   AS ++PV
Sbjct: 134 TFSPDDSQLAYV--RGGDPEFPDAPPPNPTFQPQAPEATIHLIDLTSASDNIIASGYNPV 191

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +SP G  + +   +    ++ + K+D      +L     +++  +WSP+G+SL F   + 
Sbjct: 192 FSPDGQSLVYISKN----SLWLYKRDSQTPPQKLFTIKGHIRDLSWSPNGQSLAFVDDRI 247

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                 LY I  +G+ E L         P +  
Sbjct: 248 DHGFIALYRI-TSGQLEYLPAAFGNDLFPVFSP 279



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 51/156 (32%), Gaps = 32/156 (20%)

Query: 314 SQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKEASYFDPVWSPQGDLIAFTK 365
            +  F   + G+ QL + + +                +D   + ++  +SP    +A+ +
Sbjct: 87  KEWAFVRYQAGQHQLLLTRPDPQADSLPLDCILAHYKEDDGQALYNLTFSPDDSQLAYVR 146

Query: 366 FSGEKF-----------------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
               +F                  I ++    + + ++    N   P +SP G+SL++  
Sbjct: 147 GGDPEFPDAPPPNPTFQPQAPEATIHLIDLTSASDNIIASGYN---PVFSPDGQSLVYIS 203

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           K        LY  D     + L     +  D  W  
Sbjct: 204 KNS----LWLYKRDSQTPPQKLFTIKGHIRDLSWSP 235


>gi|21674797|ref|NP_662862.1| WD repeat-containing protein [Chlorobium tepidum TLS]
 gi|21648014|gb|AAM73204.1| WD-repeat family protein [Chlorobium tepidum TLS]
          Length = 329

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 48/243 (19%), Positives = 93/243 (38%), Gaps = 19/243 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG I +++ + D       ++    D  +    FSP+ + VA  + D      +  
Sbjct: 102 DKVASGSIDSTVRIWDVATGQCLHVCKGHDTEVRMIAFSPDGKTVASCSRDT----TIKF 157

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            DT      K +   +S I    FS++GK+ +      E   +   DL++   + + N  
Sbjct: 158 WDTETGNEVKTLFGHKSYIECIAFSADGKKLV---SCGEEPVVKIWDLETG--KNIANYP 212

Query: 302 FINI---SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             +      S+SPD SQI          ++ V+ +      ++ +  E       ++P G
Sbjct: 213 TGDTLSHFVSFSPDGSQIALC---GRDAKVKVLDAATGQMLKVLEGHEDGVRALCYNPAG 269

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            LIA +  + E   +  + K             +Q+  +SP G+ +        D   KL
Sbjct: 270 TLIA-SAANDESVRLWDVAKGALVHTYRGHTHEVQSVAFSPDGKVIASGSD---DFKIKL 325

Query: 419 YSI 421
           + +
Sbjct: 326 WGV 328



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 86/235 (36%), Gaps = 17/235 (7%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++ + F+S+      ++     +  D A I+ L    D++L   RFSP+ +K+   ++D+
Sbjct: 11  STLMGFLSKIFGKKEVELKRPQVREDAALIKTLVGHEDRVLGV-RFSPDGKKLVSGSFDE 69

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +    V L D     A   +    + +    +S  G +   S   D  + I+  D+ +  
Sbjct: 70  K----VKLWDVETGNAIHTMSGHTTWVKCVDYSPKGDKVA-SGSIDSTVRIW--DVATGQ 122

Query: 294 TERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              +       +   ++SPD   +   S       +    +   ++ +     ++     
Sbjct: 123 CLHVCKGHDTEVRMIAFSPDGKTVASCSR---DTTIKFWDTETGNEVKTLFGHKSYIECI 179

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLI 405
            +S  G  +      GE+  + +   +  +        D+     ++SP G  + 
Sbjct: 180 AFSADGKKLVSC---GEEPVVKIWDLETGKNIANYPTGDTLSHFVSFSPDGSQIA 231



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 69/246 (28%), Gaps = 34/246 (13%)

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
           K     +    R+WDV   + +            R IA   S D                
Sbjct: 103 KVASGSIDSTVRIWDVATGQCL--HVCKGHDTEVRMIA--FSPD---------------- 142

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
               ++V S     ++   D +  N           +    FS + +K+        +  
Sbjct: 143 ---GKTVASCSRDTTIKFWDTETGNEVKTLFGHKSYIECIAFSADGKKLVSC----GEEP 195

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TER 296
            V + D    +         ++     FS +G +  +  +      +  +D  +    + 
Sbjct: 196 VVKIWDLETGKNIANYPTGDTLSHFVSFSPDGSQIALCGR---DAKVKVLDAATGQMLKV 252

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L        +  Y+P  + I   ++    E + +            +          +SP
Sbjct: 253 LEGHEDGVRALCYNPAGTLIASAAN---DESVRLWDVAKGALVHTYRGHTHEVQSVAFSP 309

Query: 357 QGDLIA 362
            G +IA
Sbjct: 310 DGKVIA 315



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 74/208 (35%), Gaps = 29/208 (13%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-- 308
           K +      +L  RFS +GK+ + S   DE + ++  D+++       +T+  + +    
Sbjct: 41  KTLVGHEDRVLGVRFSPDGKKLV-SGSFDEKVKLW--DVETGNA---IHTMSGHTTWVKC 94

Query: 309 --YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             YSP   ++   S       + +          + +  +       +SP G  +A    
Sbjct: 95  VDYSPKGDKVASGSI---DSTVRIWDVATGQCLHVCKGHDTEVRMIAFSPDGKTVASCSR 151

Query: 367 SGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 I     +   E   +    S ++   +S  G+ L+       +   K++ ++  
Sbjct: 152 DTT---IKFWDTETGNEVKTLFGHKSYIECIAFSADGKKLV---SCGEEPVVKIWDLE-T 204

Query: 425 GRNE-------TLINTPAYASDPQWVGF 445
           G+N        TL +  +++ D   +  
Sbjct: 205 GKNIANYPTGDTLSHFVSFSPDGSQIAL 232


>gi|300712105|ref|YP_003737919.1| prolyl oligopeptidase family protein [Halalkalicoccus jeotgali B3]
 gi|299125788|gb|ADJ16127.1| prolyl oligopeptidase family protein [Halalkalicoccus jeotgali B3]
          Length = 611

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 109/326 (33%), Gaps = 28/326 (8%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEKGDFNSRILFVSESVVSG 187
           L D     Q+       +P  W    HT  D+   + S + ++    + +LF  +    G
Sbjct: 29  LMDTTGVPQVWSL---GAPTEWPAQ-HTFYDERVTFASFSPDR----TEVLFGMDEG--G 78

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMD-TR 245
             +  L ++  DG  +  LT   +       +S + ++ A+A+   D  +  +Y      
Sbjct: 79  NERQQLFLLCPDGT-VDPLTAHPEAKHRFGGWSHDGERFAFASNRRDGAVFDIYTQGRDE 137

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFIN 304
                + I      +    +S + +R +++        D+  +D+ S     LT      
Sbjct: 138 RGEEAELIHEGDGWLTIGGWSPDDERLIVTESHSSFDQDVSVLDIDSGELTHLTPHEGRV 197

Query: 305 I--SASYSPDSSQIVFESDREGKEQLY--VMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              S S+ PD    ++    EG + LY   + +   D   I +  E +        + + 
Sbjct: 198 RFQSPSWGPDGG--IYLVTDEGADTLYLARLDAETGDLSVIERGGEWNVDGVALDEESER 255

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           + +++       + V    GS    L             ++ P G     S        +
Sbjct: 256 VVYSRNVDGYTELTVGALSGSGIEELPTPDLPKGIAGGVSFGPEGERFAVSAT-GDTHTT 314

Query: 417 KLYSID-LNGRNETLINTPAYASDPQ 441
            +Y ++   G  E   +       P+
Sbjct: 315 NVYVVECETGETERWTDAATGGIPPE 340



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 72/196 (36%), Gaps = 12/196 (6%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                 F   G R    +       ++S+   +    + T        AS+SPD ++++F
Sbjct: 13  NAYGASFGPEGDRLSFLMDTTGVPQVWSLGAPTEWPAQHTFYDERVTFASFSPDRTEVLF 72

Query: 319 ESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIG 374
             D  G   +QL+++  +G+    ++   EA +    WS  G+  AF   +  G  F I 
Sbjct: 73  GMDEGGNERQQLFLLCPDGT-VDPLTAHPEAKHRFGGWSHDGERFAFASNRRDGAVFDIY 131

Query: 375 VMKKD--GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETL 430
              +D  G +  L+ E D  L    WSP    LI   +        +  +D++ G    L
Sbjct: 132 TQGRDERGEEAELIHEGDGWLTIGGWSPDDERLI-VTESHSSFDQDVSVLDIDSGELTHL 190

Query: 431 INTPAYAS--DPQWVG 444
                      P W  
Sbjct: 191 TPHEGRVRFQSPSWGP 206


>gi|94968842|ref|YP_590890.1| peptidase S9, prolyl oligopeptidase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94550892|gb|ABF40816.1| peptidase S9, prolyl oligopeptidase [Candidatus Koribacter
           versatilis Ellin345]
          Length = 653

 Score = 87.0 bits (214), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 77/204 (37%), Gaps = 10/204 (4%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +  + T ID   +R G+FR+      +       LIS +  +   ++ V        ++
Sbjct: 40  NIPPVPTSIDEQTRRYGDFRTAAHL-DWHPQRHEMLISTRFADVPQVHWVKTPGGERRQM 98

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           T      + A + P     VF  D  G E  Q Y       +   ++  K  +    V++
Sbjct: 99  TFYPDRVLGAQFEPGGRYFVFAKDVGGGEWFQFYRFDVQSGEITLLTDGKSRNTGM-VFA 157

Query: 356 PQGDLIAF--TKFSGEKFAIGVMK-KDGSQERLLVE-DSNLQAPT-WSPSGRSLIFSRKK 410
            +G  IA+  T+ +G    + VM   D   ++LL +       P  WS  G+ ++    K
Sbjct: 158 HEGTRIAYSSTRRTGADNDLWVMDTADPKTDKLLTQLQGGGWDPADWSHDGKQILLVEGK 217

Query: 411 DGDTGSKLYSIDLNGRNETLINTP 434
                S L+ +D+    +  I   
Sbjct: 218 S-INESNLWLVDVASGEKKQITAN 240



 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 49/297 (16%), Positives = 101/297 (34%), Gaps = 18/297 (6%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           +P   R+      D +  +     G +     FV    V G         D     I  L
Sbjct: 90  TPGGERRQMTFYPDRVLGAQFEPGGRY-----FVFAKDVGGGEWFQFYRFDVQSGEITLL 144

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPR- 264
           T  + +      F+    ++AY++         +++MDT   +  K +   +     P  
Sbjct: 145 TDGKSRNTGM-VFAHEGTRIAYSSTRRTGADNDLWVMDTADPKTDKLLTQLQGGGWDPAD 203

Query: 265 FSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVF 318
           +S +GK+ L+   K     +++ VD+ S   +++T            +A +S D   I  
Sbjct: 204 WSHDGKQILLVEGKSINESNLWLVDVASGEKKQITANQTSENQVSYDNARFSRDGRGIYV 263

Query: 319 ESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            +D + +  +L          K ++ D +    +   S  G  +AF         + +M 
Sbjct: 264 STDFDSEFHRLAYFDLATMKPKFLTTDIKWDVEEFDVSEDGKTLAFVTNENGIGKLYLMD 323

Query: 378 KDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
               + R +     + +        GR +         + + +YS+D+  R      
Sbjct: 324 TATGKYRSVTALPIAIITGAKLHRDGRVVA-VNVTSAKSPTDVYSVDVASRKVERWT 379



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 68/201 (33%), Gaps = 7/201 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP----RFSPNQQKVAYATYDDEDILRVY 240
              I +++L ++D      + +T ++           RFS + + +  +T  D +  R+ 
Sbjct: 216 GKSINESNLWLVDVASGEKKQITANQTSENQVSYDNARFSRDGRGIYVSTDFDSEFHRLA 275

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             D    +      + +  +     S +GK       ++    +Y +D  +     +T  
Sbjct: 276 YFDLATMKPKFLTTDIKWDVEEFDVSEDGKTLAFVTNENGIGKLYLMDTATGKYRSVTAL 335

Query: 301 L-FINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              I   A    D   +            +Y +       +R ++ +        +  + 
Sbjct: 336 PIAIITGAKLHRDGRVVAVNVTSAKSPTDVYSVDVASRKVERWTESETGGLNASNFV-EA 394

Query: 359 DLIAFTKFSGEKFAIGVMKKD 379
            L+ +  F G++ +  + + D
Sbjct: 395 QLVKWKTFDGKEISGFLYQPD 415


>gi|111223990|ref|YP_714784.1| serine/threonine-protein kinase [Frankia alni ACN14a]
 gi|111151522|emb|CAJ63240.1| Putative serine/threonine-protein kinase with WD40 domains [Frankia
           alni ACN14a]
          Length = 869

 Score = 86.6 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 54/270 (20%), Positives = 97/270 (35%), Gaps = 29/270 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFE-----PRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            L      G     LT   D I        P FSP+ + +A + ++D   + V L DT  
Sbjct: 496 QLWNASARGEARTPLTTFADGIDHFATTIAPVFSPDGRLLAVSGWNDNGPI-VQLWDTAA 554

Query: 247 DRAPK--------RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL- 297
               +           ++ + + A  FS +G+    +  KD    ++    +    + L 
Sbjct: 555 RGEARTPLTTFTTSTTSYDNGVSAVAFSPDGRLLA-TTSKDGTARLWDTTARGKVDQSLA 613

Query: 298 TNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-----QDKEASYFD 351
           T    I +S A++SPD   +   S      QL+   + G     ++       +  +   
Sbjct: 614 TFAASIVLSAAAFSPDGRLLA-VSGWGRIAQLWDTTARGEFHTPLTSFTGHTGRLGAVTA 672

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSR 408
            V+SP G L+A +   G         +      L    ++    +   +SP GR L  S 
Sbjct: 673 VVFSPDGRLLATSGEDGTARLWDTTARGEGNAALTTFTAHTDWVSEVTFSPDGRLLA-SS 731

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            +DG   ++L+     G  +    T  +A 
Sbjct: 732 SRDGT--ARLWPTTARGTVDQSSATFRFAP 759



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 82/245 (33%), Gaps = 34/245 (13%)

Query: 218 RFSPNQQKVA------YATYDDEDILRVYLMDTRIDRAPKRIGNFR------SMILAPRF 265
            FSP+ + +A      + +   E         +    A   +  F       +  +AP F
Sbjct: 469 TFSPDGRLLATTSDENFLSTPPEPGTVQLWNASARGEARTPLTTFADGIDHFATTIAPVF 528

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATER--------LTNTLFINISA-SYSPDSSQI 316
           S +G+   +S   D    +   D  +    R         T +    +SA ++SPD   +
Sbjct: 529 SPDGRLLAVSGWNDNGPIVQLWDTAARGEARTPLTTFTTSTTSYDNGVSAVAFSPDGRLL 588

Query: 317 VFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              S ++G  +L+   + G  DQ   +           +SP G L+A + + G    +  
Sbjct: 589 ATTS-KDGTARLWDTTARGKVDQSLATFAASIVLSAAAFSPDGRLLAVSGW-GRIAQLWD 646

Query: 376 MKKDGSQERLLVE-------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               G     L            + A  +SP GR L        D  ++L+     G   
Sbjct: 647 TTARGEFHTPLTSFTGHTGRLGAVTAVVFSPDGRLLA---TSGEDGTARLWDTTARGEGN 703

Query: 429 TLINT 433
             + T
Sbjct: 704 AALTT 708



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 75/235 (31%), Gaps = 29/235 (12%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---- 279
           +++A A Y      +      R+     R     +   A  FS +G+    +  ++    
Sbjct: 429 RRLALAAYRTAPTPQARNSVLRLLAFTNRPLATLAGGYARTFSPDGRLLATTSDENFLST 488

Query: 280 ----EAMDIYSVDLQSNATERLT------NTLFINISASYSPDSSQIVFESDREGKEQLY 329
                 + +++   +  A   LT      +     I+  +SPD   +      +    + 
Sbjct: 489 PPEPGTVQLWNASARGEARTPLTTFADGIDHFATTIAPVFSPDGRLLAVSGWNDNGPIVQ 548

Query: 330 VMQSNGSDQKRISQDK--------EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           +  +    + R             +       +SP G L+A T   G    +      G 
Sbjct: 549 LWDTAARGEARTPLTTFTTSTTSYDNGVSAVAFSPDGRLLATTSKDGTA-RLWDTTARGK 607

Query: 382 QERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            ++ L   +    L A  +SP GR L  S        ++L+     G   T + +
Sbjct: 608 VDQSLATFAASIVLSAAAFSPDGRLLAVS---GWGRIAQLWDTTARGEFHTPLTS 659



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 82/257 (31%), Gaps = 24/257 (9%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWD   R ++  +   +  AS    A   S D    +    G    RI  + ++   G 
Sbjct: 598 RLWDTTARGKVD-QSLATFAASIVLSAAAFSPD--GRLLAVSG--WGRIAQLWDTTARGE 652

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L      G         R   +    FSP+ + +A +  D    L         + 
Sbjct: 653 FHTPL--TSFTGH------TGRLGAVTAVVFSPDGRLLATSGEDGTARLWDTTARGEGNA 704

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY------SVDLQSNATERLTNTLF 302
           A          +    FS +G+    S  +D    ++      +VD  S         +F
Sbjct: 705 ALTTFTAHTDWVSEVTFSPDGRLLA-SSSRDGTARLWPTTARGTVDQSSATFRFAPTHVF 763

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +    +      +    D  G  QL+   + G   + ++    A+    V SP G L+A
Sbjct: 764 WDGGVVFDRAGRLLATSGD--GDPQLWDTTARGEVDQSLATLTNAAAGV-VPSPDGRLLA 820

Query: 363 FTKFSGEKFAIGVMKKD 379
            T  S     I  +  D
Sbjct: 821 -TANSNNITRIWDLDPD 836


>gi|158338099|ref|YP_001519275.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158308340|gb|ABW29957.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1275

 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 54/312 (17%), Positives = 106/312 (33%), Gaps = 38/312 (12%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-----VSGII 189
           D + +       +   W +    ++       TG     ++ +  V  S       SG  
Sbjct: 712 DGQTLASGSRDGTVKLWNRKGKELASFTGH-FTGRSWLHSNVVNSVVFSPDGQTLASGSS 770

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             ++ + DR G  +   T     I     FSP+ Q +A  + D              +R 
Sbjct: 771 DGTVKLWDRQGKELASFTKRGASINSV-VFSPDGQTLASGSTDG--------TVKLWNRQ 821

Query: 250 PKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            K + +F      +++  FS +G+    S  +D+ + ++  D Q       T      +S
Sbjct: 822 GKELASFTGHGDAVMSVVFSPDGQTLA-SGSRDDTVKLW--DRQGKELVSFTERGDSVMS 878

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +++PD   +       G   +  +      +    +    S     +S  G  +A    
Sbjct: 879 VAFNPDGQTLA----SGGIRGVVKLWDRQGKELASFKGHGNSVSFVAFSSDGQTLASRST 934

Query: 367 SGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            G      ++K  G Q + L        ++  +SP G++L F   +D +   KL+  D  
Sbjct: 935 DG------IVKLWGRQGKELASFTGGRAKSVAFSPDGQTLAF---EDSEGTMKLW--DRQ 983

Query: 425 GRNETLINTPAY 436
           G+     N    
Sbjct: 984 GKELASFNGHGN 995



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 63/365 (17%), Positives = 135/365 (36%), Gaps = 48/365 (13%)

Query: 88   KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
             Q + +       + W+  G +++      + G   + V F      D + +        
Sbjct: 844  GQTLASGSRDDTVKLWDRQGKELV---SFTERGDSVMSVAFN----PDGQTLASGGIRGV 896

Query: 148  PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
               W +    ++       +     F+S    ++     GI+K    +  R G  +   T
Sbjct: 897  VKLWDRQGKELASFKGHGNSVSFVAFSSDGQTLASRSTDGIVK----LWGRQGKELASFT 952

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI---LAPR 264
              R + +    FSP+ Q +A+   D E  ++++      DR  K + +F       ++  
Sbjct: 953  GGRAKSV---AFSPDGQTLAF--EDSEGTMKLW------DRQGKELASFNGHGNLGMSVV 1001

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS +G+    S     ++ ++  D Q               S ++SPD   +   S  +G
Sbjct: 1002 FSPDGQTLA-SGSHYGSVKLW--DRQGKELVSFKGHGNSVNSVAFSPDGQTLASGS-VDG 1057

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +L+        ++  S +   +  + V +SP G  +A     G    + +  + G + 
Sbjct: 1058 TVKLW----GRQGKELASFNGHGNSVNSVVFSPDGQTLASGSRDGT---VKLWNRQGKEL 1110

Query: 384  RLLVEDSN-LQAPTWSPSGRSLIFSRKKDG------DTGSKLYSIDLNGRNETLINTPAY 436
                   + + +  ++P G++L+ S   DG        G +L S   +  +   +N+ A+
Sbjct: 1111 ASFKGHGDSVMSVAFNPDGQTLV-SGSTDGTVKLWDRQGKELASFTGHSSS---VNSVAF 1166

Query: 437  ASDPQ 441
            +SD Q
Sbjct: 1167 SSDGQ 1171



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 77/240 (32%), Gaps = 27/240 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   +         +    FSP+ Q +A  + D      V L D +        G     
Sbjct: 606 GIKEQNQLTGHRVGVRSVTFSPDGQTLASGSADG----TVKLWDRQGKELASFTGTGYGT 661

Query: 260 IL-APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            + +  FS +G+    S      + ++  D Q              +S  +SPD   +  
Sbjct: 662 SINSVVFSPDGQTLA-SGGWFGTVKLW--DRQGKELASFKGHGNSVMSVVFSPDGQTLAS 718

Query: 319 ESDREGKEQLYVMQSNGSDQKRIS-------QDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            S R+G  +L+     G +    +                 V+SP G  +A     G   
Sbjct: 719 GS-RDGTVKLW--NRKGKELASFTGHFTGRSWLHSNVVNSVVFSPDGQTLASGSSDGT-- 773

Query: 372 AIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKD-----GDTGSKLYSIDLNG 425
            + +  + G +     +   ++ +  +SP G++L               G +L S   +G
Sbjct: 774 -VKLWDRQGKELASFTKRGASINSVVFSPDGQTLASGSTDGTVKLWNRQGKELASFTGHG 832



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 93/281 (33%), Gaps = 31/281 (11%)

Query: 77   DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
                 ++     Q +   DS    + W+  G ++         G   + V F      D 
Sbjct: 954  GRAKSVAFSPDGQTLAFEDSEGTMKLWDRQGKEL---ASFNGHGNLGMSVVFS----PDG 1006

Query: 137  KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS--ESVVSGIIKNSLC 194
            + +     + S   W +    +            G+  + + F    +++ SG +  ++ 
Sbjct: 1007 QTLASGSHYGSVKLWDRQGKELVS------FKGHGNSVNSVAFSPDGQTLASGSVDGTVK 1060

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            +  R G  +       + +     FSP+ Q +A  + D              +R  K + 
Sbjct: 1061 LWGRQGKELASFNGHGNSVNSV-VFSPDGQTLASGSRDG--------TVKLWNRQGKELA 1111

Query: 255  NFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +F+     +++  F+ +G+  + S   D  + ++  D Q       T       S ++S 
Sbjct: 1112 SFKGHGDSVMSVAFNPDGQTLV-SGSTDGTVKLW--DRQGKELASFTGHSSSVNSVAFSS 1168

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            D   +V  SD +   +L+ M      +            +P
Sbjct: 1169 DGQTLVSGSD-DRTVKLWNMDLEHLRELGCQWLGNYFANNP 1208


>gi|183220313|ref|YP_001838309.1| putative periplasmic component of the Tol biopolymer transport
           system [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
 gi|189910430|ref|YP_001961985.1| Tol transport system component [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775106|gb|ABZ93407.1| Tol transport system component [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167778735|gb|ABZ97033.1| Putative periplasmic component of the Tol biopolymer transport
           system [Leptospira biflexa serovar Patoc strain 'Patoc 1
           (Paris)']
          Length = 2644

 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 79/234 (33%), Gaps = 29/234 (12%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +D   I + Y   T+    P  +   R   L    + +G+    +  +    DI+  D
Sbjct: 34  VNFDYSAISKNYFSPTQSKPFP--LTVQRGNNLYSSTTKDGRYLFYATDQKGNFDIWFRD 91

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDK 345
           LQS+    +T+  F     + SPD   +VF S   D EG   L  + +    Q+ +  ++
Sbjct: 92  LQSSLVVPITDNSFSETKPAISPDGKYLVFVSEEFDSEGDLILLSIDTEEWIQEYLKGNR 151

Query: 346 EAS---------------------YFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQ 382
             +                       DPVWSP G  I F   +F+     +  +      
Sbjct: 152 FINDDFINLTNQPNKKGEYQKGITDTDPVWSPDGKTIYFISDRFTPGLPNLCYITMSNPD 211

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
               +       P  S  G+ +      + + G ++Y   +  +    I    +
Sbjct: 212 VIKPITTFGATTPFISADGQFVYIVSYFEDNKG-EVYQYQIANKALKRITNDNF 264



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 15/183 (8%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRA-L 273
           +P +SP+ + + + +      L      T  +    K I  F      P  S++G+   +
Sbjct: 178 DPVWSPDGKTIYFISDRFTPGLPNLCYITMSNPDVIKPITTFG--ATTPFISADGQFVYI 235

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---EGKEQ--- 327
           +S  +D   ++Y   + + A +R+TN  F++ + +    S  + + S R    G  +   
Sbjct: 236 VSYFEDNKGEVYQYQIANKALKRITNDNFLDFTPTIDNRSKNLYYSSIRKDTNGNGRLDE 295

Query: 328 ----LYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               L + ++  + ++RI    E S FD  +S   G  I F+        I  + ++GS 
Sbjct: 296 RDHSLLIKKNLTTGEERILSSGETSNFDVRYSNFNGGSILFSASYYNAINIYFIPENGSI 355

Query: 383 ERL 385
            + 
Sbjct: 356 PKQ 358



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 85/290 (29%), Gaps = 59/290 (20%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--------------I 253
                   +P  SP+ + + + + + +    + L+    +   +               +
Sbjct: 101 TDNSFSETKPAISPDGKYLVFVSEEFDSEGDLILLSIDTEEWIQEYLKGNRFINDDFINL 160

Query: 254 GNFRS---------MILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSNAT-ERLTNTL 301
            N  +             P +S +GK       +      ++  + + +    + +T   
Sbjct: 161 TNQPNKKGEYQKGITDTDPVWSPDGKTIYFISDRFTPGLPNLCYITMSNPDVIKPITTFG 220

Query: 302 FINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +   S D   +   S   + K ++Y  Q      KRI+ D     F P    +   
Sbjct: 221 A--TTPFISADGQFVYIVSYFEDNKGEVYQYQIANKALKRITNDNF-LDFTPTIDNRSKN 277

Query: 361 IAFTKFSGEKFAIGVMK-----------KDGSQERLLVEDSNLQA-PTWSP-SGRSLIFS 407
           + ++    +    G +                +ER+L           +S  +G S++FS
Sbjct: 278 LYYSSIRKDTNGNGRLDERDHSLLIKKNLTTGEERILSSGETSNFDVRYSNFNGGSILFS 337

Query: 408 RKKDGDTGSKLYSIDLNGRNETLIN-----------TPAYASDPQWVGFM 446
                     +Y I  NG      N           TP  + +     F+
Sbjct: 338 ASYYN--AINIYFIPENGSIPKQPNIKEQFQYSKTLTPGQSIE---SYFL 382


>gi|298251074|ref|ZP_06974878.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297549078|gb|EFH82945.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 1237

 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 99/313 (31%), Gaps = 31/313 (9%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKK--------FFSSPASWRKI--AHTISDDIYQSI 166
             +          RLW+V   + +   +           SP   R     H  +  +++  
Sbjct: 873  TRLASGSYDGTVRLWEVSTGQCLATLQGHAIWSTSVSFSPDRSRFATGGHDGTVKLWEVS 932

Query: 167  TGE---------KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            TG+             +         + SG    ++ V +                +   
Sbjct: 933  TGKCLKTLRGHTSWVGSVGFSLDGTLLASGSHDRTVRVWEVSTGKCLKTLQGHTDWVRSV 992

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+  ++A  +YD      V   +    +  + +    S + +  FS +G     S  
Sbjct: 993  TFSPDGSRLASGSYDT----TVRTWEVSTGKCLQTLRGHTSWVGSVGFSLDGTLLA-SGS 1047

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D  + ++ V       + L     +  S ++SPD + +   SD      + V   +   
Sbjct: 1048 HDRTVRVWEVS-TGKCLKTLQGHTDLVRSGAFSPDGTVLASGSD---DRTVRVWDVSTGQ 1103

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPT 396
              +I Q         ++SP G  +A     G      V    G+  + L      + A  
Sbjct: 1104 CLKILQGHTGWVESVIFSPDGATLASGGHDGTVRVWEV--SSGACLKTLHRHPGRIWAVV 1161

Query: 397  WSPSGRSLIFSRK 409
            +SP G  ++ + +
Sbjct: 1162 FSPDGSLVLSASE 1174



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 88/268 (32%), Gaps = 19/268 (7%)

Query: 176  RILFVSESVVSGIIKNSLCV--MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             + F ++S   G   N   V   + +              +    FSP+  ++A  ++D 
Sbjct: 781  SVAFSADSATLGSGSNDQMVKLWEVNTGKCLTTLQGHTDWVRSVAFSPDGARLASGSHDR 840

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V + +    +    +      + A  FS NG R   S   D  + ++ V      
Sbjct: 841  ----TVRVWEVSTGQCLTTLQGHTGQVWAVAFSPNGTRLA-SGSYDGTVRLWEVS-TGQC 894

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
               L      + S S+SPD S+       +G  +L+  + +     +  +   +      
Sbjct: 895  LATLQGHAIWSTSVSFSPDRSRFA-TGGHDGTVKLW--EVSTGKCLKTLRGHTSWVGSVG 951

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKD 411
            +S  G L+A          + V +    +    ++       + T+SP G  L       
Sbjct: 952  FSLDGTLLASGSHDRT---VRVWEVSTGKCLKTLQGHTDWVRSVTFSPDGSRLASGSY-- 1006

Query: 412  GDTGSKLYSIDLNGRNETLINTPAYASD 439
             DT  + + +      +TL    ++   
Sbjct: 1007 -DTTVRTWEVSTGKCLQTLRGHTSWVGS 1033



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 76/243 (31%), Gaps = 17/243 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + SG     + + +                +    FSP+  ++A ++ D      V L 
Sbjct: 664 RLASGGEDRLVRLWEVSTGQCLKTLQGHTDWVRSVAFSPDGARLASSSNDG----TVKLW 719

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +    +           + +  FS +G R   S   D  + ++ V  +      L     
Sbjct: 720 EVSTGQCLTTFQGHTGRVWSVAFSPDGTRLA-SSSDDGTVRLWEVSTEQCLAT-LQGHTG 777

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++S DS+ +         + + + + N        Q          +SP G  +A
Sbjct: 778 RVWSVAFSADSATL---GSGSNDQMVKLWEVNTGKCLTTLQGHTDWVRSVAFSPDGARLA 834

Query: 363 FTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                     + V +    Q    L      + A  +SP+G  L  S   DG    +L+ 
Sbjct: 835 SGSHDRT---VRVWEVSTGQCLTTLQGHTGQVWAVAFSPNGTRLA-SGSYDGTV--RLWE 888

Query: 421 IDL 423
           +  
Sbjct: 889 VST 891



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 75/227 (33%), Gaps = 13/227 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  + + E    + +      +    +      + +  F  +G R   S  
Sbjct: 615 AFSPDGQCLAGGSMNGE----IGVWQVARWKQLMTLSGHLGWVWSVAFRPDGARLA-SGG 669

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D  + ++ V       + L        S ++SPD +++   S  +G  +L+  + +   
Sbjct: 670 EDRLVRLWEVS-TGQCLKTLQGHTDWVRSVAFSPDGARLA-SSSNDGTVKLW--EVSTGQ 725

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                Q      +   +SP G  +A +        +  +  +     L      + +  +
Sbjct: 726 CLTTFQGHTGRVWSVAFSPDGTRLA-SSSDDGTVRLWEVSTEQCLATLQGHTGRVWSVAF 784

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           S    +L        D   KL+ ++      TL     +     +  
Sbjct: 785 SADSATL---GSGSNDQMVKLWEVNTGKCLTTLQGHTDWVRSVAFSP 828



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 76/230 (33%), Gaps = 21/230 (9%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             G N+  L       L    FS  + + AY        + +   +       + + +  
Sbjct: 553 YGGGNVINLLAQLRGTLRGYDFSHQRIRQAYLA-----GVELQEANFAASHFEQSVFSEP 607

Query: 258 -SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            S I    FS +G+        +  + ++ V  +      L+  L    S ++ PD +++
Sbjct: 608 FSAIYCVAFSPDGQCLA-GGSMNGEIGVWQV-ARWKQLMTLSGHLGWVWSVAFRPDGARL 665

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGV 375
                  G+++L  +    + Q   +      +     +SP G  +A +   G    + +
Sbjct: 666 A----SGGEDRLVRLWEVSTGQCLKTLQGHTDWVRSVAFSPDGARLASSSNDGT---VKL 718

Query: 376 MKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +    Q           + +  +SP G  L  S     D   +L+ +  
Sbjct: 719 WEVSTGQCLTTFQGHTGRVWSVAFSPDGTRLASSSD---DGTVRLWEVST 765



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 53/187 (28%), Gaps = 36/187 (19%)

Query: 113  TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
             G V       L          R+W+V   K +  K         R              
Sbjct: 1031 VGSVGFSLDGTLLASGSHDRTVRVWEVSTGKCL--KTLQGHTDLVR-------------- 1074

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                G F+     ++    SG    ++ V D        +       +    FSP+   +
Sbjct: 1075 ---SGAFSPDGTVLA----SGSDDRTVRVWDVSTGQCLKILQGHTGWVESVIFSPDGATL 1127

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            A           V + +       K +      I A  FS +G   ++S  +D  +  + 
Sbjct: 1128 A----SGGHDGTVRVWEVSSGACLKTLHRHPGRIWAVVFSPDG-SLVLSASEDRTILCW- 1181

Query: 287  VDLQSNA 293
             ++++  
Sbjct: 1182 -NVRTGE 1187


>gi|116620550|ref|YP_822706.1| WD40 domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223712|gb|ABJ82421.1| WD40 domain protein beta Propeller [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 851

 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 89/260 (34%), Gaps = 11/260 (4%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTR 245
           G     +  MDR G   + +  + +   + P R SP+  + A A     D    +L    
Sbjct: 554 GQPTRQMVWMDRSG---KQIALTGEPGEWGPGRISPDGNRAA-AGKLGPDGRNAHLWLLD 609

Query: 246 IDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +  A + + +       +P +S +G +     ++ +  DIYS      +   L     +N
Sbjct: 610 LSGAAEPVSSESGPHEGSPVWSPDGAKLAYFARQGDIYDIYSRSALPGSRPELLLKSDVN 669

Query: 305 ISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              + ++ D   +++     G        + G  +     D   S      SP G  +A+
Sbjct: 670 KYPTDWTHDGKYLIYGLTGRGTHLDVWGLAVGDRRSAPILDTVFSEGFASVSPDGKWLAY 729

Query: 364 TKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                 +  + V + DG     +R  +   +   P W      L +    DG   S    
Sbjct: 730 QSDQSGRTEVYVQQFDGLSNGTKRRWMVSKSGGLPRWRSDSNELFYMT-PDGRMMSVAIR 788

Query: 421 IDLNGRNETLINTPAYASDP 440
           I  +G  E     P + + P
Sbjct: 789 IGADGSIEAGAPQPLFQTRP 808



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 71/220 (32%), Gaps = 8/220 (3%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDE-AMDIYS 286
                    R  +   R  +    +          R S +G RA    +  D     ++ 
Sbjct: 549 VYQGVGQPTRQMVWMDRSGKQIA-LTGEPGEWGPGRISPDGNRAAAGKLGPDGRNAHLWL 607

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +DL   A    + +     S  +SPD +++ + + +     +Y   +    +  +    +
Sbjct: 608 LDLSGAAEPVSSESGPHEGSPVWSPDGAKLAYFARQGDIYDIYSRSALPGSRPELLLKSD 667

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRS 403
            + +   W+  G  + +   +G    + V        R   +L    +    + SP G+ 
Sbjct: 668 VNKYPTDWTHDGKYLIY-GLTGRGTHLDVWGLAVGDRRSAPILDTVFSEGFASVSPDGKW 726

Query: 404 LIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQW 442
           L +   + G T   +   D L+   +           P+W
Sbjct: 727 LAYQSDQSGRTEVYVQQFDGLSNGTKRRWMVSKSGGLPRW 766



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 65/178 (36%), Gaps = 19/178 (10%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            ++  M   P  S +G+    S    +    ++   L +     +  +   +    +SPD
Sbjct: 304 TSYPGM---PSVSPDGRYLTFSAVGPEGKRMLWLRPLDALHATVIQGSEGASA-PFWSPD 359

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S  I F     G + L  ++ +G   + I    EA      W+  G  I F+    E F 
Sbjct: 360 SQMIAFF----GGKNLMKVRISGGRPETI-CPAEAMPGGGAWNTDGT-ILFSPSLSEGF- 412

Query: 373 IGVMKKDGSQERLLV------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +   G + +L+        +     P + P  +  +F ++ D    S +Y+  ++
Sbjct: 413 -YKVPATGGKPQLVFKLDESKSERGDVWPQFLPDSKHFVFYQQTDLAETSGVYAGSMD 469



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 100/283 (35%), Gaps = 36/283 (12%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +++ S V    K  L +   D   +        +    P +SP+ Q +A+  +  +++++
Sbjct: 318 YLTFSAVGPEGKRMLWLRPLD--ALHATVIQGSEGASAPFWSPDSQMIAF--FGGKNLMK 373

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--- 295
           V +        P+ I    +M     ++++G   L S    E    Y V       +   
Sbjct: 374 VRI----SGGRPETICPAEAMPGGGAWNTDGT-ILFSPSLSEGF--YKVPATGGKPQLVF 426

Query: 296 RLTNTLFI--NISASYSPDSSQIVF--ESDREGKEQLYVMQSNGSDQKRI---SQDKEAS 348
           +L  +     ++   + PDS   VF  ++D      +Y    +  +  R+     +   S
Sbjct: 427 KLDESKSERGDVWPQFLPDSKHFVFYQQTDLAETSGVYAGSMDPPEYHRLFASQTNAVYS 486

Query: 349 YFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG---- 401
             DP  SP+   + +          F  G ++  G    L  +   +++   +P      
Sbjct: 487 ATDPN-SPKTGHLLYINERNLTAMAFNAGKLEVSGDPITLATDIGAVRSLALAPISVSAT 545

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             L++  +  G    ++  +D +G+   L   P       W  
Sbjct: 546 GVLVY--QGVGQPTRQMVWMDRSGKQIALTGEPGE-----WGP 581



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 66/214 (30%), Gaps = 19/214 (8%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P        P  SP+ + + ++    E    ++L       A    G+      AP +S 
Sbjct: 301 PEHTSYPGMPSVSPDGRYLTFSAVGPEGKRMLWLRPLDALHATVIQGSEG--ASAPFWSP 358

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           + +            ++  V +     E +     +    +++ D + +   S  EG   
Sbjct: 359 DSQMIAFF----GGKNLMKVRISGGRPETICPAEAMPGGGAWNTDGTILFSPSLSEG--- 411

Query: 328 LYVMQSNGSDQKRISQ----DKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGS 381
            Y + + G   + + +      E     P + P      F + +   E   +     D  
Sbjct: 412 FYKVPATGGKPQLVFKLDESKSERGDVWPQFLPDSKHFVFYQQTDLAETSGVYAGSMDPP 471

Query: 382 QERLLVEDSNLQAPTW----SPSGRSLIFSRKKD 411
           +   L         +     SP    L++  +++
Sbjct: 472 EYHRLFASQTNAVYSATDPNSPKTGHLLYINERN 505



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 8/93 (8%)

Query: 352 PVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           P  SP G  + F+      K  + +   D     ++       AP WSP  + + F    
Sbjct: 310 PSVSPDGRYLTFSAVGPEGKRMLWLRPLDALHATVIQGSEGASAPFWSPDSQMIAFF--- 366

Query: 411 DGDTGSKLYSIDLN-GRNETLINTPAYASDPQW 442
               G  L  + ++ GR ET+    A      W
Sbjct: 367 ---GGKNLMKVRISGGRPETICPAEAMPGGGAW 396



 Score = 40.0 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             S    P+ SP GR L FS     +    L+   L+  + T+I     AS P W  
Sbjct: 303 HTSYPGMPSVSPDGRYLTFSA-VGPEGKRMLWLRPLDALHATVIQGSEGASAPFWSP 358


>gi|170088711|ref|XP_001875578.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164648838|gb|EDR13080.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1496

 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 52/323 (16%), Positives = 102/323 (31%), Gaps = 49/323 (15%)

Query: 106  LGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS 159
            L    +    V      R  V        R+WD +  + ++                 +S
Sbjct: 936  LKGHGVYVTSVACSPDGRHIVSGSDDKTVRVWDAQTGQSVM----------------ILS 979

Query: 160  DDIYQSITGEKGDFNSRIL---FVSESVVSGIIKNSLCVMDRD----------GANIRYL 206
            +D+   +        + IL    +      G++K + C    D          G +    
Sbjct: 980  EDMVAMLLQLHFLLMAGILPLDLMMRQSECGMLKQAYCFWIYDKTVRVWDVQTGQSAMDP 1039

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRF 265
                D  +    FSPN + +A   YD      V + D +  ++         + + +  F
Sbjct: 1040 LKGHDHYVTSVAFSPNGKHIASGCYDK----TVRVWDAQTGQSVVDPLKGHGVYVTSVAF 1095

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDRE 323
            S + +  + S   D+ + ++  D Q+                S ++SPD   IV  SD  
Sbjct: 1096 SPDSRHIV-SGSDDKTVRVW--DAQTGQSVMTPFEGHDDYVTSVAFSPDGRHIVSGSD-- 1150

Query: 324  GKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              + + V  +          +   +S     +SP G  I    +        V     + 
Sbjct: 1151 -DKTVRVWDAQTGQSVMDPLKGHGSSVTSVAFSPDGRHIVSGSYDKTVRVWDVQTGQSAM 1209

Query: 383  ERLLVEDSNLQAPTWSPSGRSLI 405
            + +   D  + +  +SP GR + 
Sbjct: 1210 DPIKGHDHYVTSVAFSPDGRHIA 1232



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 103/307 (33%), Gaps = 51/307 (16%)

Query: 124  LRVEFRLWDVKDRKQ----IIGKKFFSSPASWRKIAHTISDDIYQSITGE---------- 169
                 R+WDV+  +     + G   + +  ++      I+   Y                
Sbjct: 1021 YDKTVRVWDVQTGQSAMDPLKGHDHYVTSVAFSPNGKHIASGCYDKTVRVWDAQTGQSVV 1080

Query: 170  -----KGDFNSRILFVSESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSP 221
                  G + + + F  +S   VSG    ++ V D + G ++       D  +    FSP
Sbjct: 1081 DPLKGHGVYVTSVAFSPDSRHIVSGSDDKTVRVWDAQTGQSVMTPFEGHDDYVTSVAFSP 1140

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + + +   + D    +RV+   T         G   S + +  FS +G+  + S   D+ 
Sbjct: 1141 DGRHIVSGSDD--KTVRVWDAQTGQSVMDPLKG-HGSSVTSVAFSPDGRHIV-SGSYDKT 1196

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQK 339
            + ++ V    +A + +        S ++SPD   I       G   + + V  +      
Sbjct: 1197 VRVWDVQTGQSAMDPIKGHDHYVTSVAFSPDGRHIA-----SGCYDKTVRVWDAQTGQIV 1251

Query: 340  R-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                +  +        SP G  I                  GS ++  V   + Q  T+S
Sbjct: 1252 VDPLKGHDLYVTSVACSPDGRHII----------------SGSDDK-TVRVWDAQTVTFS 1294

Query: 399  PSGRSLI 405
            P GR ++
Sbjct: 1295 PDGRHVV 1301



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 92/291 (31%), Gaps = 54/291 (18%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIG-----KKFFSSPASWRKIAHTIS--DD----IYQSITG 168
                     R+WD +  + ++        + +S A      H +S  DD    ++ + TG
Sbjct: 1060 ASGCYDKTVRVWDAQTGQSVVDPLKGHGVYVTSVAFSPDSRHIVSGSDDKTVRVWDAQTG 1119

Query: 169  EK--------GDFNSRILFVSESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEP 217
            +          D+ + + F  +    VSG    ++ V D + G ++          +   
Sbjct: 1120 QSVMTPFEGHDDYVTSVAFSPDGRHIVSGSDDKTVRVWDAQTGQSVMDPLKGHGSSVTSV 1179

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---- 273
             FSP+ + +   +YD    +RV+ + T         G+    + +  FS +G+       
Sbjct: 1180 AFSPDGRHIVSGSYD--KTVRVWDVQTGQSAMDPIKGHDH-YVTSVAFSPDGRHIASGCY 1236

Query: 274  -------------ISVQKDEAMDIYSVDLQ-SNATERLTNTLFINISASY-------SPD 312
                         I V   +  D+Y   +  S     + +         +       SPD
Sbjct: 1237 DKTVRVWDAQTGQIVVDPLKGHDLYVTSVACSPDGRHIISGSDDKTVRVWDAQTVTFSPD 1296

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIA 362
               +V  SD    + + V  +          +          +S  G  I 
Sbjct: 1297 GRHVVSGSD---DKTVRVWDAQTGQSVMDPLKGHGDGVTSVAFSSDGRHIV 1344



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 55/168 (32%), Gaps = 27/168 (16%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           M+   ++   R+ +    I +  FS +G+    S   D+ + ++  D Q+  T       
Sbjct: 812 MEDWSEKCLLRLADHDGWITSVTFSPDGRHIA-SGANDKTVRVW--DAQTGQT------- 861

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDL 360
                    P  +  ++  D+     + V  +          +          +SP G  
Sbjct: 862 ------VMDPLKAYRLWIYDKT----IRVWDAQTGQSAMDPLKGHNDDVTSVAFSPDGRH 911

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTW--SPSGRSLI 405
           IA   +      + V      Q  +  ++   +   +   SP GR ++
Sbjct: 912 IASGCYDKT---VRVWDAQTGQIVVDPLKGHGVYVTSVACSPDGRHIV 956



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 82/255 (32%), Gaps = 42/255 (16%)

Query: 182  ESVVSGIIKNSLCVMD--------RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            ++V+  +    L + D        + G +        +  +    FSP+ + +A   YD 
Sbjct: 860  QTVMDPLKAYRLWIYDKTIRVWDAQTGQSAMDPLKGHNDDVTSVAFSPDGRHIASGCYDK 919

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 V + D +  +          + + +   S +G+  + S   D+ + ++  D Q+ 
Sbjct: 920  ----TVRVWDAQTGQIVVDPLKGHGVYVTSVACSPDGRHIV-SGSDDKTVRVW--DAQTG 972

Query: 293  ATERLTNT--------------LFI---NISASYSPDS--SQIVFESDREGKEQLYVMQS 333
             +  + +                 I   ++    S      Q       +   +++ +Q+
Sbjct: 973  QSVMILSEDMVAMLLQLHFLLMAGILPLDLMMRQSECGMLKQAYCFWIYDKTVRVWDVQT 1032

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDS 390
              S    + +  +       +SP G  IA   +      + V      Q     L     
Sbjct: 1033 GQSAMDPL-KGHDHYVTSVAFSPNGKHIASGCYDKT---VRVWDAQTGQSVVDPLKGHGV 1088

Query: 391  NLQAPTWSPSGRSLI 405
             + +  +SP  R ++
Sbjct: 1089 YVTSVAFSPDSRHIV 1103



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 49/162 (30%), Gaps = 34/162 (20%)

Query: 207 TPSRDQILFEPRFSPNQQKV-------------------------AYATYDDEDILRVYL 241
               D  +    FSP+ + +                         AY  +  +  +RV+ 
Sbjct: 823 LADHDGWITSVTFSPDGRHIASGANDKTVRVWDAQTGQTVMDPLKAYRLWIYDKTIRVWD 882

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTN 299
             T         G     + +  FS +G+    S   D+ + ++  D Q+       L  
Sbjct: 883 AQTGQSAMDPLKG-HNDDVTSVAFSPDGRHIA-SGCYDKTVRVW--DAQTGQIVVDPLKG 938

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
                 S + SPD   IV  SD    + + V  +       I
Sbjct: 939 HGVYVTSVACSPDGRHIVSGSD---DKTVRVWDAQTGQSVMI 977


>gi|302539675|ref|ZP_07292017.1| WD-40 repeat protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302457293|gb|EFL20386.1| WD-40 repeat protein [Streptomyces himastatinicus ATCC 53653]
          Length = 1237

 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 89/246 (36%), Gaps = 23/246 (9%)

Query: 165 SITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           ++TG KG   S      S +  +    +++ + D      R        I++   FSP+ 
Sbjct: 695 ALTGHKGQIKSIAFSPDSRTAATAGADHTVRLWDTRRRARRLTLSGHTGIVWAAAFSPDG 754

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +A A  D +    V L +T   +    +      + A  FS +G+    +   D    
Sbjct: 755 RTLATAGADHK----VMLWNTATGKRIATLTGHTRSVDAVAFSPDGRTLA-TASDDWTAR 809

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS- 342
           ++ V   +     L        + ++SPD   +       G     VM  +     R++ 
Sbjct: 810 LWDVRRHTRVAT-LRGHSGEVRAVAFSPDGRTLA-----TGGHDKSVMLWDSGSATRLTT 863

Query: 343 -QDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
              +  + +   +SP+  L+A     G+   +    +   G ++R+           +SP
Sbjct: 864 LTGQTTNVYTLAFSPRDSLLASAGEDGKVVLWDTARIPLSGHRDRI-------NDVAFSP 916

Query: 400 SGRSLI 405
            GR+L 
Sbjct: 917 DGRTLA 922



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 81/245 (33%), Gaps = 22/245 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R      +  + E  F P+   +A  + D      + L DT   R    +    + + A 
Sbjct: 610 RAELSGHNDAVSEAAFGPDG-TLATVSRDR----TLTLWDTGARRRLATLTGHSTWLRAV 664

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDR 322
            +S +G     +   D  + ++  D         LT       S ++SPDS         
Sbjct: 665 AYSPDGCTLA-TGGDDGKLVLW--DAAKRRPSAALTGHKGQIKSIAFSPDSRTAA----T 717

Query: 323 EGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            G +    +       +R++        +   +SP G  +A    +G    + +      
Sbjct: 718 AGADHTVRLWDTRRRARRLTLSGHTGIVWAAAFSPDGRTLA---TAGADHKVMLWNTATG 774

Query: 382 QE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +    L     ++ A  +SP GR+L  +     D  ++L+ +  + R  TL         
Sbjct: 775 KRIATLTGHTRSVDAVAFSPDGRTLATASD---DWTARLWDVRRHTRVATLRGHSGEVRA 831

Query: 440 PQWVG 444
             +  
Sbjct: 832 VAFSP 836



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 86/263 (32%), Gaps = 19/263 (7%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ +G     L + D                +    FSP+ +  A A  D      V L 
Sbjct: 672 TLATGGDDGKLVLWDAAKRRPSAALTGHKGQIKSIAFSPDSRTAATAGADH----TVRLW 727

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           DTR       +     ++ A  FS +G+    +   D  + +++          LT    
Sbjct: 728 DTRRRARRLTLSGHTGIVWAAAFSPDGRTLA-TAGADHKVMLWNT-ATGKRIATLTGHTR 785

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              + ++SPD   +   SD +   +L+ ++ +        +          +SP G  +A
Sbjct: 786 SVDAVAFSPDGRTLATASD-DWTARLWDVRRHTRVATL--RGHSGEVRAVAFSPDGRTLA 842

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                       VM  D      L       +N+    +SP    L  + +         
Sbjct: 843 -----TGGHDKSVMLWDSGSATRLTTLTGQTTNVYTLAFSPRDSLLASAGEDGKVVLWDT 897

Query: 419 YSIDLNGRNETLINTPAYASDPQ 441
             I L+G  +  IN  A++ D +
Sbjct: 898 ARIPLSGHRDR-INDVAFSPDGR 919



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 87/263 (33%), Gaps = 10/263 (3%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            ++   +    + L   +  G             + +  +SP+ + VA    D + IL   
Sbjct: 968  TDGRPASARNHVLTFWNGSGQGPPVRRTGHAGPVKDVAYSPDGRLVATGGGDKKVILWDA 1027

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                R+       G   + +    FS +G+    +  +D    ++ V  ++     L+  
Sbjct: 1028 ARRNRLASLTAASGEAGTAVNGVAFSPDGRFLA-TANQDRKATLWDVAGRTRLAT-LSGH 1085

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++SPD   +         +++ +       +     D     F   +S  G +
Sbjct: 1086 TGQLRSVAFSPDGRMLA---TAGIDQKVMLWDVAERTRVATLADSTGPAFALAFSRDGRM 1142

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +A T  S +   +  + +      L      ++A  +SP GR+L        D    L++
Sbjct: 1143 LA-TANSNKSVMLWDIARRSPLALLTGHTKQVRALAFSPDGRTLA---TGGDDRSVLLWN 1198

Query: 421  IDLNGRNETLINTPAYASDPQ-W 442
             D       L  T      PQ W
Sbjct: 1199 ADTRHTPAQLCRTAGRNLTPQEW 1221



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 80/272 (29%), Gaps = 20/272 (7%)

Query: 160  DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            D     ++G +   N          ++    + + + D      R    S    +    F
Sbjct: 896  DTARIPLSGHRDRINDVAFSPDGRTLATAGGDDVVLWDSRRRTRRATFTSGSGPVHAVAF 955

Query: 220  SPNQQKVAYATYDDEDILR-----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            +P+ + +A  +  D          +   +      P R       +    +S +G+    
Sbjct: 956  APDGRTLATVSGTDGRPASARNHVLTFWNGSGQGPPVRRTGHAGPVKDVAYSPDGRLVA- 1014

Query: 275  SVQKDEAMDIYSVDLQSNA-TERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLY 329
                     +   D         LT       +A    ++SPD   +   ++++ K  L+
Sbjct: 1015 --TGGGDKKVILWDAARRNRLASLTAASGEAGTAVNGVAFSPDGRFLA-TANQDRKATLW 1071

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                 G  +               +SP G ++A T    +K  +  + +      L    
Sbjct: 1072 --DVAGRTRLATLSGHTGQLRSVAFSPDGRMLA-TAGIDQKVMLWDVAERTRVATLADST 1128

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                A  +S  GR L      + +    L+ I
Sbjct: 1129 GPAFALAFSRDGRMLA---TANSNKSVMLWDI 1157


>gi|237709872|ref|ZP_04540353.1| prolyl oligopeptidase [Bacteroides sp. 9_1_42FAA]
 gi|237725458|ref|ZP_04555939.1| prolyl oligopeptidase [Bacteroides sp. D4]
 gi|265753524|ref|ZP_06088879.1| prolyl oligopeptidase [Bacteroides sp. 3_1_33FAA]
 gi|229436145|gb|EEO46222.1| prolyl oligopeptidase [Bacteroides dorei 5_1_36/D4]
 gi|229455965|gb|EEO61686.1| prolyl oligopeptidase [Bacteroides sp. 9_1_42FAA]
 gi|263235238|gb|EEZ20762.1| prolyl oligopeptidase [Bacteroides sp. 3_1_33FAA]
          Length = 706

 Score = 86.6 bits (213), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 76/269 (28%), Gaps = 60/269 (22%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS------VQKDEAMDIY 285
             E I+    +  +  R           I +   S +GK+   +       +      IY
Sbjct: 28  GYEPIIGKQEITIKDGRLTPEALWAMGRIGSLSISPDGKKIAYTVAYYSVSENKSHHVIY 87

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            ++        LT T +      +    ++I F  +  G  Q++ M  +G++ +RI  D 
Sbjct: 88  VMNTDGKNNTLLTQTAWNESEPQWIKGGTKIAFLCNESGGSQIWEMNPDGTE-RRIISDF 146

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF---------------------------------A 372
           +       +SP G  I F                                          
Sbjct: 147 KGDIEGFSFSPDGKKILFISQIKYGQRTVDLYPDLPKASGIIVNDLMYKHWDEWVESIPH 206

Query: 373 IGVMKKDG---SQERLLVEDSNLQAP----------TWSPSGRSLIFSRKKDGD------ 413
             +   +G        ++E    +AP           WS   + + ++ +K         
Sbjct: 207 PFIADFNGNMMGAATDIMEGEPFEAPMKPFGGIEQLAWSNDSKQIAYTSRKKQGLAYAVS 266

Query: 414 TGSKLYSIDLN-GRNETLINTPAYASDPQ 441
           T S +Y  ++  G    L       S+  
Sbjct: 267 TDSDIYLYNIEKGTTLNLCKLNGQDSNGT 295



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 87/291 (29%), Gaps = 81/291 (27%)

Query: 218 RFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+ +K+AY        +++    +Y+M+T   +    +         P++   G + 
Sbjct: 60  SISPDGKKIAYTVAYYSVSENKSHHVIYVMNTD-GKNNTLLTQTAWNESEPQWIKGGTKI 118

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK------- 325
                +     I+ ++        +++        S+SPD  +I+F S  +         
Sbjct: 119 AFLCNESGGSQIWEMNPDGTERRIISDFKGDIEGFSFSPDGKKILFISQIKYGQRTVDLY 178

Query: 326 --------------------------EQLYVMQSNGSDQKRISQDKEASYFDP------- 352
                                        ++   NG+     +   E   F+        
Sbjct: 179 PDLPKASGIIVNDLMYKHWDEWVESIPHPFIADFNGNMMGAATDIMEGEPFEAPMKPFGG 238

Query: 353 ----VWSPQGDLIAFTKFSGEKFAIGV------------------------MKKDGSQER 384
                WS     IA+T    +  A  V                           +G+ E 
Sbjct: 239 IEQLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKLNGQDSNGTDEM 298

Query: 385 LLVEDSNLQAPTWSPSGRSLIF-SRKKDG--DTGSKLYSIDLNGRNETLIN 432
                     P +SP G+ + + S ++DG     ++L   +LN   +T + 
Sbjct: 299 R----GYDTNPKFSPDGKYIAWQSMERDGYESDRNRLCVYNLNNGQKTFVT 345



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 111/324 (34%), Gaps = 76/324 (23%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+          + +  M+ DG   R ++  +  I     FSP+ +K+ + +    
Sbjct: 116 TKIAFLCNESGG----SQIWEMNPDGTERRIISDFKGDIEGF-SFSPDGKKILFISQIKY 170

Query: 235 DILRVYL-------------------MDTRIDRAPKR-IGNFRSMILAPR---------- 264
               V L                    D  ++  P   I +F   ++             
Sbjct: 171 GQRTVDLYPDLPKASGIIVNDLMYKHWDEWVESIPHPFIADFNGNMMGAATDIMEGEPFE 230

Query: 265 -------------FSSNGKRALISVQKDEAM--------DIYSVDLQSNATERL------ 297
                        +S++ K+   + +K + +        DIY  +++   T  L      
Sbjct: 231 APMKPFGGIEQLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKLNGQ 290

Query: 298 ----TNT-LFINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEA 347
               T+     + +  +SPD   I ++S +R+G    + +L V   N   +  +++  E+
Sbjct: 291 DSNGTDEMRGYDTNPKFSPDGKYIAWQSMERDGYESDRNRLCVYNLNNGQKTFVTESFES 350

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
              D  W+     + F         +     +G  ++L     +  +   +  G  +I +
Sbjct: 351 GVDDYCWNNDSQSLYFIGVWHGTSMVYSTNLNGDIKKLTDGMYDYGSVAMA--GDKII-T 407

Query: 408 RKKDGDTGSKLYSID-LNGRNETL 430
           ++       ++Y++   +G+   L
Sbjct: 408 KRHSISAADEIYTLTPADGQVAQL 431



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 65/200 (32%), Gaps = 30/200 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-----------------FRSMI 260
            +S + +++AY +   + +      D+ I       G                   R   
Sbjct: 243 AWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKLNGQDSNGTDEMRGYD 302

Query: 261 LAPRFSSNGKRALI-SVQKDE----AMDIYSVDLQSNATERLTNT--LFINISASYSPDS 313
             P+FS +GK     S+++D        +   +L +     +T +    ++    ++ DS
Sbjct: 303 TNPKFSPDGKYIAWQSMERDGYESDRNRLCVYNLNNGQKTFVTESFESGVDDY-CWNNDS 361

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFA 372
             + F     G   +Y    NG     I +  +  Y     +  GD I   + S      
Sbjct: 362 QSLYFIGVWHGTSMVYSTNLNGD----IKKLTDGMYDYGSVAMAGDKIITKRHSISAADE 417

Query: 373 IGVMKKDGSQERLLVEDSNL 392
           I  +     Q   L  +++ 
Sbjct: 418 IYTLTPADGQVAQLSHENDH 437



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 63/162 (38%), Gaps = 9/162 (5%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRI 246
            +L +   +G +       R      P+FSP+ + +A+ + +      D  R+ + +   
Sbjct: 280 TTLNLCKLNGQDSNGTDEMR-GYDTNPKFSPDGKYIAWQSMERDGYESDRNRLCVYNLNN 338

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +      +F S +    ++++ +             +YS +L     ++LT+ ++   S
Sbjct: 339 GQKTFVTESFESGVDDYCWNNDSQSLYFIGVWHGTSMVYSTNLN-GDIKKLTDGMYDYGS 397

Query: 307 ASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEA 347
            + +    +I+ +       +++Y +        ++S + + 
Sbjct: 398 VAMA--GDKIITKRHSISAADEIYTLTPADGQVAQLSHENDH 437


>gi|227539553|ref|ZP_03969602.1| fibronectin, type III domain protein [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227240618|gb|EEI90633.1| fibronectin, type III domain protein [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 498

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 84/441 (19%), Positives = 147/441 (33%), Gaps = 65/441 (14%)

Query: 50  IAFTKFVSIDELGGKVSEVVSKDLQRSDV-----FNLISQDSFKQKITNPDSIPRFQDWN 104
           I    +    EL G V E+   +L  SD      F +    S     T P  I    +  
Sbjct: 74  IPLGDYAVKAELSGYVMEIKGGNLTASDQSVSLVFEMKDDKSLNSPPTVPQLISPVDNAT 133

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLW-------DVKDRKQIIGKKF------FSSPASW 151
           +L   V++T       +D L   +RL        DV+D + I  K +      + +   W
Sbjct: 134 NLPLSVILTWNCTDPDEDSLT--YRLIIKNNKSGDVRDIRNIKNKSYQLENLEYGTSYFW 191

Query: 152 RKIAHTISDDIYQSITGE------KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
           + +A   SD I+  +              +R  +V +S  +        ++  D  N  +
Sbjct: 192 QIVA---SDSIHTEVFSPTYKLTTSETPQNRFHYVRKSGDN------YLIVSSDENNQSF 242

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR----IGNFRSMIL 261
                       R S     +A+    D +   ++          K     I  F    L
Sbjct: 243 NLTGNHTNSLRVRKSNIAGVIAFIRVTDGNA-HIFTTKADGSAISKVTTIPIAGFNIAEL 301

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVF- 318
              +S+NGK  +          +Y V+   + TE +  T          +S D ++I   
Sbjct: 302 DFTWSANGKEIVY----PNFDKLYKVNKDGSGTEMIYRTPDGSFISECDWSNDGTKIALK 357

Query: 319 ESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-------- 369
            +D  G K ++Y++   G+ Q  I ++ + +     +S  GD I +T             
Sbjct: 358 TNDINGYKTKIYIIDIFGNVQNSILENVKGAAGGINFSASGDKILYTYDISGYESQDYRQ 417

Query: 370 -KFAIGVMKK------DGSQERLLVEDSNLQAPTWSPSGRSLIFS-RKKDGDTGSKLYSI 421
               I +         D S    +    N     +SP+   +IF+    DG +   +Y I
Sbjct: 418 LNSHIFLYNLADNTKTDLSVFTKIPAGYNDLDARFSPNEAEVIFTHTSNDGISQKNIYKI 477

Query: 422 DLNGRNETLINTPAYASDPQW 442
            +       +   A A  P W
Sbjct: 478 GITSETSRKLLF-ANAWMPDW 497



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 48/135 (35%), Gaps = 15/135 (11%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F   R+  +   ++ S+ ++Q         +      S    +IAF + +     I   K
Sbjct: 220 FHYVRKSGDNYLIVSSDENNQSFNLTGNHTNSLRVRKSNIAGVIAFIRVTDGNAHIFTTK 279

Query: 378 KDGSQERLLVE----DSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-- 429
            DGS    +        N+     TWS +G+ +++          KLY ++ +G      
Sbjct: 280 ADGSAISKVTTIPIAGFNIAELDFTWSANGKEIVY------PNFDKLYKVNKDGSGTEMI 333

Query: 430 -LINTPAYASDPQWV 443
                 ++ S+  W 
Sbjct: 334 YRTPDGSFISECDWS 348


>gi|212693127|ref|ZP_03301255.1| hypothetical protein BACDOR_02634 [Bacteroides dorei DSM 17855]
 gi|212664232|gb|EEB24804.1| hypothetical protein BACDOR_02634 [Bacteroides dorei DSM 17855]
          Length = 706

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 76/269 (28%), Gaps = 60/269 (22%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS------VQKDEAMDIY 285
             E I+    +  +  R           I +   S +GK+   +       +      IY
Sbjct: 28  GYEPIIGKQEITIKDGRLTPEALWAMGRIGSLSISPDGKKIAYTVAYYSVSENKSHHVIY 87

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            ++        LT T +      +    ++I F  +  G  Q++ M  +G++ +RI  D 
Sbjct: 88  VMNTDGKNNTLLTQTAWNESEPQWIKGGTKIAFLCNESGGSQIWEMNPDGTE-RRIISDF 146

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF---------------------------------A 372
           +       +SP G  I F                                          
Sbjct: 147 KGDIEGFSFSPDGKKILFISQIKYGQRTVDLYPDLPKASGIIVNDLMYKHWDEWVESIPH 206

Query: 373 IGVMKKDG---SQERLLVEDSNLQAP----------TWSPSGRSLIFSRKKDGD------ 413
             +   +G        ++E    +AP           WS   + + ++ +K         
Sbjct: 207 PFIADFNGDMMGAATDIMEGEPFEAPMKPFGGIEQLAWSNDSKQIAYTSRKKQGLAYAVS 266

Query: 414 TGSKLYSIDLN-GRNETLINTPAYASDPQ 441
           T S +Y  ++  G    L       S+  
Sbjct: 267 TDSDIYLYNIEKGTTLNLCKLNGQDSNGT 295



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 86/291 (29%), Gaps = 81/291 (27%)

Query: 218 RFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+ +K+AY        +++    +Y+M+T   +    +         P++   G + 
Sbjct: 60  SISPDGKKIAYTVAYYSVSENKSHHVIYVMNTD-GKNNTLLTQTAWNESEPQWIKGGTKI 118

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK------- 325
                +     I+ ++        +++        S+SPD  +I+F S  +         
Sbjct: 119 AFLCNESGGSQIWEMNPDGTERRIISDFKGDIEGFSFSPDGKKILFISQIKYGQRTVDLY 178

Query: 326 --------------------------EQLYVMQSNGSDQKRISQDKEASYFDP------- 352
                                        ++   NG      +   E   F+        
Sbjct: 179 PDLPKASGIIVNDLMYKHWDEWVESIPHPFIADFNGDMMGAATDIMEGEPFEAPMKPFGG 238

Query: 353 ----VWSPQGDLIAFTKFSGEKFAIGV------------------------MKKDGSQER 384
                WS     IA+T    +  A  V                           +G+ E 
Sbjct: 239 IEQLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKLNGQDSNGTDEM 298

Query: 385 LLVEDSNLQAPTWSPSGRSLIF-SRKKDG--DTGSKLYSIDLNGRNETLIN 432
                     P +SP G+ + + S ++DG     ++L   +LN   +T + 
Sbjct: 299 R----GYDTNPKFSPDGKYIAWQSMERDGYESDRNRLCVYNLNNGQKTFVT 345



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 111/324 (34%), Gaps = 76/324 (23%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+          + +  M+ DG   R ++  +  I     FSP+ +K+ + +    
Sbjct: 116 TKIAFLCNESGG----SQIWEMNPDGTERRIISDFKGDIEGF-SFSPDGKKILFISQIKY 170

Query: 235 DILRVYL-------------------MDTRIDRAPKR-IGNFRSMILAPR---------- 264
               V L                    D  ++  P   I +F   ++             
Sbjct: 171 GQRTVDLYPDLPKASGIIVNDLMYKHWDEWVESIPHPFIADFNGDMMGAATDIMEGEPFE 230

Query: 265 -------------FSSNGKRALISVQKDEAM--------DIYSVDLQSNATERL------ 297
                        +S++ K+   + +K + +        DIY  +++   T  L      
Sbjct: 231 APMKPFGGIEQLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKLNGQ 290

Query: 298 ----TNT-LFINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEA 347
               T+     + +  +SPD   I ++S +R+G    + +L V   N   +  +++  E+
Sbjct: 291 DSNGTDEMRGYDTNPKFSPDGKYIAWQSMERDGYESDRNRLCVYNLNNGQKTFVTESFES 350

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
              D  W+     + F         +     +G  ++L     +  +   +  G  +I +
Sbjct: 351 GVDDYCWNYDSQSLYFIGVWHGTSMVYSTNLNGDIKKLTDGMYDYGSVAMA--GDKII-T 407

Query: 408 RKKDGDTGSKLYSID-LNGRNETL 430
           ++       ++Y++   +G+   L
Sbjct: 408 KRHSISAADEIYTLTPADGQVAQL 431



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 65/200 (32%), Gaps = 30/200 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-----------------FRSMI 260
            +S + +++AY +   + +      D+ I       G                   R   
Sbjct: 243 AWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKLNGQDSNGTDEMRGYD 302

Query: 261 LAPRFSSNGKRALI-SVQKDE----AMDIYSVDLQSNATERLTNT--LFINISASYSPDS 313
             P+FS +GK     S+++D        +   +L +     +T +    ++    ++ DS
Sbjct: 303 TNPKFSPDGKYIAWQSMERDGYESDRNRLCVYNLNNGQKTFVTESFESGVDDY-CWNYDS 361

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFA 372
             + F     G   +Y    NG     I +  +  Y     +  GD I   + S      
Sbjct: 362 QSLYFIGVWHGTSMVYSTNLNGD----IKKLTDGMYDYGSVAMAGDKIITKRHSISAADE 417

Query: 373 IGVMKKDGSQERLLVEDSNL 392
           I  +     Q   L  +++ 
Sbjct: 418 IYTLTPADGQVAQLSHENDH 437



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 62/162 (38%), Gaps = 9/162 (5%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRI 246
            +L +   +G +       R      P+FSP+ + +A+ + +      D  R+ + +   
Sbjct: 280 TTLNLCKLNGQDSNGTDEMR-GYDTNPKFSPDGKYIAWQSMERDGYESDRNRLCVYNLNN 338

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +      +F S +    ++ + +             +YS +L     ++LT+ ++   S
Sbjct: 339 GQKTFVTESFESGVDDYCWNYDSQSLYFIGVWHGTSMVYSTNLN-GDIKKLTDGMYDYGS 397

Query: 307 ASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEA 347
            + +    +I+ +       +++Y +        ++S + + 
Sbjct: 398 VAMA--GDKIITKRHSISAADEIYTLTPADGQVAQLSHENDH 437


>gi|90021918|ref|YP_527745.1| hypothetical protein Sde_2273 [Saccharophagus degradans 2-40]
 gi|89951518|gb|ABD81533.1| hypothetical protein Sde_2273 [Saccharophagus degradans 2-40]
          Length = 378

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 113/331 (34%), Gaps = 49/331 (14%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG-------IIKNSLCV 195
           K  ++   WR +A  +                ++I+F+S    +          + ++ +
Sbjct: 65  KQITNDNRWRDLAFDV--------------GKNKIVFMSNRHTNTGIDLRKQSEQFNIYL 110

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
               G   + +  + +     P+ + ++  VAY   +      V L+D    +    I  
Sbjct: 111 TSTAGGEPQ-VLANTNLDETYPKLNSSETIVAYTLKEQPQEQLV-LLDIETRKPITTINA 168

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSP 311
              +  +  +     +  I     +  +I   D++   + ++ +    + S     S++P
Sbjct: 169 AAIIDYS--WHPQNNQIAIITDNADNTNIAIYDVKKQKSSQIFSLSKKDNSTLSYISWAP 226

Query: 312 DSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +   + F  +      K QL ++    +    ISQ  +       W+P    + ++    
Sbjct: 227 NGKNLAFIVNPGKPTAKRQLKLLNLATNKVSPISQPDQEVQSPVSWAPDSKSLTYSALLN 286

Query: 369 ---------------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-G 412
                           +  I V   +G+  ++         P +SP G+ + F   +D  
Sbjct: 287 YKYYFDETTYKKVYEGEMHIFVADTEGALRQVTTGKHLHNKPEFSPDGKQIAFLFAEDLS 346

Query: 413 DTGSKLYSIDLNGRNETLINTPAYA-SDPQW 442
              + L  +DLNG+    +  P +  S+  W
Sbjct: 347 QHTAALRIVDLNGKVLNELFKPVHGNSEIVW 377



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/237 (11%), Positives = 74/237 (31%), Gaps = 36/237 (15%)

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
                N  +I  +  W+    Q+ +   +     +       ++DVK +K    + F  S
Sbjct: 162 PITTINAAAIIDYS-WHPQNNQIAI---ITDNADNT---NIAIYDVKKQKS--SQIFSLS 212

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
                            +++      N + L    +      K  L +++     +  ++
Sbjct: 213 KKD------------NSTLSYISWAPNGKNLAFIVNPGKPTAKRQLKLLNLATNKVSPIS 260

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDIL------------RVYLMDTRIDRAPKRIGN 255
               ++     ++P+ + + Y+   +                 +++     + A +++  
Sbjct: 261 QPDQEVQSPVSWAPDSKSLTYSALLNYKYYFDETTYKKVYEGEMHIFVADTEGALRQVTT 320

Query: 256 FRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTNTLFINISASY 309
            + +   P FS +GK+      +D       +  VDL       L   +  N    +
Sbjct: 321 GKHLHNKPEFSPDGKQIAFLFAEDLSQHTAALRIVDLNGKVLNELFKPVHGNSEIVW 377


>gi|162451896|ref|YP_001614263.1| hypothetical protein sce3623 [Sorangium cellulosum 'So ce 56']
 gi|161162478|emb|CAN93783.1| hypothetical protein sce3623 [Sorangium cellulosum 'So ce 56']
          Length = 1722

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 56/323 (17%), Positives = 109/323 (33%), Gaps = 42/323 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++  G     V   LWD+     +            R   H  SD +        GD 
Sbjct: 1087 GTLLASGHSHGIV---LWDMATGGAL-----------RRLNGH--SDWVTSIAFSPDGD- 1129

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     ++ SG    ++ + D    N+  +       +    FSP+ + +A  + D 
Sbjct: 1130 ---------TLASGSDDCTVRLWDVSTGNVLCVLKGHAHHVNSVTFSPDGETLASGSSD- 1179

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L      R    +   R  ++A +FS +G     S   D  + ++ V    + 
Sbjct: 1180 ---CTVRLWQVATFRQIAVLHGHRDGVMAVKFSPDGATLA-SGAHDTVIRLWKV-ATGDV 1234

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
               ++      +S ++SPD   +   S       + +      +Q+   +    S     
Sbjct: 1235 LRVVSGHRAGVLSIAFSPDGGTLASGS---ADYDIGLWDVTTGEQRNTLKGHLRSVRSVA 1291

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP G  +A +   G   A+ +  + G     L    + + +  +SP G +L        
Sbjct: 1292 FSPDGATLASSAGDG---AVQLWNRSGVALHALQGHSAAVTSVAFSPDGATLA---SGSK 1345

Query: 413  DTGSKLYSIDLNGRNETLINTPA 435
            D+  +L+ +   G    L   P+
Sbjct: 1346 DSTVRLWHVSTGGAVRVLEGQPS 1368



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 107/337 (31%), Gaps = 29/337 (8%)

Query: 113  TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
            TG  ++  + +  V   +    D   +           WR  A T +  +      ++G 
Sbjct: 1356 TGGAVRVLEGQPSVSMAMALSADGGTLALGSEDVGIQLWRMSAWTAAPPLV-----DRGI 1410

Query: 173  FNSRILFVSESVVSGIIKN----SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             +++++F  +       +      L  +  D      +       + +  F  +   +A 
Sbjct: 1411 SSAKLVFSPDGTTLAFAQRDHTVRLGRLGAD--RTARVLRGHYHRIMDIAFRHDGGMLAS 1468

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + D      V L  T      + + +    I +  FS +G     S   D  + ++ VD
Sbjct: 1469 GSLDG----TVRLWHTEAAEPLRVMEDHEDGISSVAFSPDGTMLA-SGSFDRTIRLWKVD 1523

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             +  A   L     +  S ++SPD + +   SD      + +       ++R        
Sbjct: 1524 GE-GAARVLEGHGRVVRSVAFSPDGATLASGSD---DTTVRLWPLVEGAEQRALAGHAGQ 1579

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                 +SP G  +A +        +  +  D +   L      + +  + P G  L+ S 
Sbjct: 1580 VKCVTFSPDGAWLA-SGSDDGSVLLWRVSADYTARVLQGHTGEIVSVAFMPDGEMLL-SS 1637

Query: 409  KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
              DG      + +        L+  P       WV F
Sbjct: 1638 STDGTIRF--WDVRTGACLAVLLKLPEG-----WVAF 1667



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 98/327 (29%), Gaps = 52/327 (15%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQI-----------------IGKKFFSSPAS------ 150
            G  +  G D   V  RLWDV     +                  G+   S  +       
Sbjct: 1128 GDTLASGSDDCTV--RLWDVSTGNVLCVLKGHAHHVNSVTFSPDGETLASGSSDCTVRLW 1185

Query: 151  ----WRKIA--HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
                +R+IA  H   D +        G           ++ SG     + +      ++ 
Sbjct: 1186 QVATFRQIAVLHGHRDGVMAVKFSPDGA----------TLASGAHDTVIRLWKVATGDVL 1235

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             +       +    FSP+   +A  + D      + L D         +      + +  
Sbjct: 1236 RVVSGHRAGVLSIAFSPDGGTLASGSAD----YDIGLWDVTTGEQRNTLKGHLRSVRSVA 1291

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS +G     S   D A+ ++  +    A   L        S ++SPD + +   S    
Sbjct: 1292 FSPDGATLA-SSAGDGAVQLW--NRSGVALHALQGHSAAVTSVAFSPDGATLASGSK--- 1345

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
               + +   +     R+ + + +       S  G  +A          +  M    +   
Sbjct: 1346 DSTVRLWHVSTGGAVRVLEGQPSVSMAMALSADGGTLALGS-EDVGIQLWRMSAWTAAPP 1404

Query: 385  LLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            L+    +     +SP G +L F+++  
Sbjct: 1405 LVDRGISSAKLVFSPDGTTLAFAQRDH 1431



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 59/379 (15%), Positives = 124/379 (32%), Gaps = 87/379 (22%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G  +  G     +   LWDV   +Q           S R +A                 F
Sbjct: 1254 GGTLASGSADYDIG--LWDVTTGEQ--RNTLKGHLRSVRSVA-----------------F 1292

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +     ++ S   G ++    + +R G  +  L       +    FSP+   +A  + D 
Sbjct: 1293 SPDGATLASSAGDGAVQ----LWNRSGVALHAL-QGHSAAVTSVAFSPDGATLASGSKDS 1347

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L       A + +    S+ +A   S++G    +   +D  + ++ +   + A
Sbjct: 1348 ----TVRLWHVSTGGAVRVLEGQPSVSMAMALSADGGTLAL-GSEDVGIQLWRMSAWTAA 1402

Query: 294  TERLTNTLFINISASYSPDSSQIVFE------------SDR------------------- 322
               +   +  +    +SPD + + F             +DR                   
Sbjct: 1403 PPLVDRGIS-SAKLVFSPDGTTLAFAQRDHTVRLGRLGADRTARVLRGHYHRIMDIAFRH 1461

Query: 323  ----------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                      +G  +L+  ++   +  R+ +D E       +SP G ++A   F      
Sbjct: 1462 DGGMLASGSLDGTVRLWHTEAA--EPLRVMEDHEDGISSVAFSPDGTMLASGSFD-RTIR 1518

Query: 373  IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +  +  +G+   L      +++  +SP G +L        DT  +L+ + + G  +  + 
Sbjct: 1519 LWKVDGEGAARVLEGHGRVVRSVAFSPDGATLASGSD---DTTVRLWPL-VEGAEQRALA 1574

Query: 433  TPA-------YASDPQWVG 444
              A       ++ D  W+ 
Sbjct: 1575 GHAGQVKCVTFSPDGAWLA 1593



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 94/269 (34%), Gaps = 24/269 (8%)

Query: 113  TGRVIKEGKDR----LRVEF-RLWDVK---DRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
            T R+ + G DR    LR  + R+ D+    D   +       +     ++ HT + +  +
Sbjct: 1432 TVRLGRLGADRTARVLRGHYHRIMDIAFRHDGGMLASGSLDGTV----RLWHTEAAEPLR 1487

Query: 165  SITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
             +   +   +S       ++  SG    ++ +   DG     +     +++    FSP+ 
Sbjct: 1488 VMEDHEDGISSVAFSPDGTMLASGSFDRTIRLWKVDGEGAARVLEGHGRVVRSVAFSPDG 1547

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
              +A  + D      V L         + +      +    FS +G     S   D ++ 
Sbjct: 1548 ATLASGSDDT----TVRLWPLVEGAEQRALAGHAGQVKCVTFSPDGAWLA-SGSDDGSVL 1602

Query: 284  IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            ++ V         L       +S ++ PD  +++  S  +G  + + +++ G+    + +
Sbjct: 1603 LWRVSADY-TARVLQGHTGEIVSVAFMPDG-EMLLSSSTDGTIRFWDVRT-GACLAVLLK 1659

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              E       + P G        +G  + 
Sbjct: 1660 LPEG---WVAFRPDGCYKLSGNVAGGFWH 1685



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 74/243 (30%), Gaps = 54/243 (22%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              SP+   +A           + L D     A +R+      + +  FS +G     S  
Sbjct: 1082 AISPDGTLLA-----SGHSHGIVLWDMATGGALRRLNGHSDWVTSIAFSPDGDTLA-SGS 1135

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD---------------- 321
             D  + ++ V    N    L        S ++SPD   +   S                 
Sbjct: 1136 DDCTVRLWDVS-TGNVLCVLKGHAHHVNSVTFSPDGETLASGSSDCTVRLWQVATFRQIA 1194

Query: 322  -----REGKEQ------------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                 R+G                     + + +    D  R+     A      +SP G
Sbjct: 1195 VLHGHRDGVMAVKFSPDGATLASGAHDTVIRLWKVATGDVLRVVSGHRAGVLSIAFSPDG 1254

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGS 416
              +A        + IG+      ++R  ++    ++++  +SP G +L       GD   
Sbjct: 1255 GTLASGSAD---YDIGLWDVTTGEQRNTLKGHLRSVRSVAFSPDGATLA---SSAGDGAV 1308

Query: 417  KLY 419
            +L+
Sbjct: 1309 QLW 1311



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 59/172 (34%), Gaps = 11/172 (6%)

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            A   S +G   L++      + ++ +     A  RL        S ++SPD   +   SD
Sbjct: 1080 AVAISPDGT--LLASGHSHGIVLWDM-ATGGALRRLNGHSDWVTSIAFSPDGDTLASGSD 1136

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                  + +   +  +   + +          +SP G+ +A +  S     +  +     
Sbjct: 1137 ---DCTVRLWDVSTGNVLCVLKGHAHHVNSVTFSPDGETLA-SGSSDCTVRLWQVATFRQ 1192

Query: 382  QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
               L      + A  +SP G +L        DT  +L+ +   G    +++ 
Sbjct: 1193 IAVLHGHRDGVMAVKFSPDGATLA---SGAHDTVIRLWKV-ATGDVLRVVSG 1240


>gi|170108230|ref|XP_001885324.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164639800|gb|EDR04069.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1124

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 104/299 (34%), Gaps = 59/299 (19%)

Query: 173  FNSRILFVSE--SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            + + + F  +   +VSG    ++ + D + G  +          +    FSP+ + +   
Sbjct: 740  WVTSVAFSPDGKYIVSGSSDKTIRMWDAQTGKPVSDSFEGHTHFVNSVAFSPDGKYIVSG 799

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            ++D    +        +    +   N    + +  FS +GK  + S   DE + ++  D 
Sbjct: 800  SWDKTMRMWDAQTQNPVSGPSEDNTN---SVTSVAFSPDGKYIV-SGSWDETIRMW--DA 853

Query: 290  QSNATERLTNTLFIN-----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQ 343
            Q+   ++L    F        S ++SPD   IV  S     + + +  +   +     S+
Sbjct: 854  QT---QKLVTHPFEGHTEHVTSVAFSPDGKYIVSGS---WDKTMRMWDAQTQNPVSGPSE 907

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK------------------------KD 379
            D   S     +SP G  I           I +                           D
Sbjct: 908  DNTNSVTSVAFSPDGKYIVSGSRDKT---IRMWDAQTQKLVTHPFEGHTETVTSVAFSLD 964

Query: 380  GSQERL----LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            G QE L    L +  N+ +  +SP G+ ++       D   +++    + + E L++ P
Sbjct: 965  GKQESLSHIHLKDTQNVNSVAFSPDGKYIV---SGSSDKTIRMW----DAQTEKLVSDP 1016



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 58/410 (14%), Positives = 123/410 (30%), Gaps = 122/410 (29%)

Query: 78   VFNLISQDS-------FKQKITNPDSIPRFQ---------------DWNSLGAQVLVTG- 114
             F  ISQ +            ++   + ++                 W S+ +  ++ G 
Sbjct: 680  FFQPISQSAPHIYLSALPMSPSDSLIVKKYSHHFTRVVSFEKGKQISWPSINS--ILQGH 737

Query: 115  -----RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
                  V      +  V        R+WD +  K +                     D +
Sbjct: 738  TSWVTSVAFSPDGKYIVSGSSDKTIRMWDAQTGKPV--------------------SDSF 777

Query: 164  QSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRFS 220
            +  T     F + + F  +   +VSG    ++ + D    N     +      +    FS
Sbjct: 778  EGHTH----FVNSVAFSPDGKYIVSGSWDKTMRMWDAQTQNPVSGPSEDNTNSVTSVAFS 833

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKD 279
            P+ + +   ++D+     + + D +  +            + +  FS +GK  + S   D
Sbjct: 834  PDGKYIVSGSWDE----TIRMWDAQTQKLVTHPFEGHTEHVTSVAFSPDGKYIV-SGSWD 888

Query: 280  EAMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + M ++  D Q+       +    +      S ++SPD   IV  S R+   +++    +
Sbjct: 889  KTMRMW--DAQTQNPV---SGPSEDNTNSVTSVAFSPDGKYIVSGS-RDKTIRMW----D 938

Query: 335  GSDQKRISQDKEA----------------------------SYFDPVWSPQGDLIAFTKF 366
               QK ++   E                             +     +SP G  I     
Sbjct: 939  AQTQKLVTHPFEGHTETVTSVAFSLDGKQESLSHIHLKDTQNVNSVAFSPDGKYIVSGSS 998

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQ-----APTWSPSGRSLIFSRKKD 411
                  I +       E+L+ +          +  +SP G+ ++     D
Sbjct: 999  DKT---IRMWDAQT--EKLVSDPFECHTDIVTSLAFSPDGKGIVSESYDD 1043



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 87/249 (34%), Gaps = 47/249 (18%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--- 259
           I  +       +    FSP+ + +   + D      + + D +  +      +F      
Sbjct: 730 INSILQGHTSWVTSVAFSPDGKYIVSGSSDK----TIRMWDAQTGKPVSD--SFEGHTHF 783

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSS 314
           + +  FS +GK  + S   D+ M ++  D Q+       +    +      S ++SPD  
Sbjct: 784 VNSVAFSPDGKYIV-SGSWDKTMRMW--DAQTQNPV---SGPSEDNTNSVTSVAFSPDGK 837

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEA---SYFDPVWSPQGDLIAFTKFSGEKF 371
            IV  S     E + +  +    QK ++   E          +SP G  I    +     
Sbjct: 838 YIVSGS---WDETIRMWDAQT--QKLVTHPFEGHTEHVTSVAFSPDGKYIVSGSWDK--- 889

Query: 372 AIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               M+   +Q +  V   +        +  +SP G+ ++   +   D   +++    + 
Sbjct: 890 ---TMRMWDAQTQNPVSGPSEDNTNSVTSVAFSPDGKYIVSGSR---DKTIRMW----DA 939

Query: 426 RNETLINTP 434
           + + L+  P
Sbjct: 940 QTQKLVTHP 948


>gi|312197838|ref|YP_004017899.1| NB-ARC domain protein [Frankia sp. EuI1c]
 gi|311229174|gb|ADP82029.1| NB-ARC domain protein [Frankia sp. EuI1c]
          Length = 1339

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 92/312 (29%), Gaps = 42/312 (13%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSG 187
            RLWDV    +                          + TG  G   +        + V+G
Sbjct: 791  RLWDVVTGAE------------------------RAAFTGHVGAVTTMAFSPDGRLLVTG 826

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                +  +          +       +   RFSP+ + V    YD      V L D    
Sbjct: 827  GADRTARIWRPGATAEPVVLTGHAGSIKVVRFSPDGRMVVTGGYDR----TVRLWDAATG 882

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINIS 306
                 I +++  +    FS +G+   +      A  +   DL +      L         
Sbjct: 883  DELTVITDYKGRVTGVTFSPDGRLLAVV---GHARSVLLFDLATGVEHAILAGHTGGVSG 939

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            A +SPD   I   S  +   +L+   S       I            +SP G ++A    
Sbjct: 940  AVFSPDGRVIA-TSSEDWTVRLW--NSATGTANAILSGHGRPVNGLAFSPDGQVLA--TG 994

Query: 367  SGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            S + +A+     DG+  +        +    +S  GR +        D   +L+ ++   
Sbjct: 995  SDDTYALIWDVADGADHQARGGHTHQVTETVFSRDGRLIATGSD---DKTVRLWDVETGA 1051

Query: 426  RNETLINTPAYA 437
             +  L     + 
Sbjct: 1052 EHPALDGYAGWG 1063



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 74/247 (29%), Gaps = 16/247 (6%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V +G    +  + D      R         +    FSP+ + +              +  
Sbjct: 781  VATGGQDGTARLWDVVTGAERAAFTGHVGAVTTMAFSPDGRLLV----TGGADRTARIWR 836

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLF 302
                  P  +      I   RFS +G R +++   D  + ++  D  +      +T+   
Sbjct: 837  PGATAEPVVLTGHAGSIKVVRFSPDG-RMVVTGGYDRTVRLW--DAATGDELTVITDYKG 893

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 ++SPD   +           + +       +  I           V+SP G +IA
Sbjct: 894  RVTGVTFSPDGRLLAVV---GHARSVLLFDLATGVEHAILAGHTGGVSGAVFSPDGRVIA 950

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             T        +       +   L      +    +SP G+ L        DT + ++ + 
Sbjct: 951  -TSSEDWTVRLWNSATGTANAILSGHGRPVNGLAFSPDGQVLATGSD---DTYALIWDV- 1005

Query: 423  LNGRNET 429
             +G +  
Sbjct: 1006 ADGADHQ 1012



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 90/287 (31%), Gaps = 33/287 (11%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS-------PASWRKIAHTISDDIYQSI 166
            GR+I  G D   V  RLWDV+   +      ++          + R +A    D+  +  
Sbjct: 1030 GRLIATGSDDKTV--RLWDVETGAEHPALDGYAGWGNVVAFSPNGRLLATDCFDNTVRLW 1087

Query: 167  TGEKGD------FNSRILFVSESVVSGII------KNSLCVMDRDGANIRYLTPSRDQIL 214
                G        ++R +  +     G +        +  V D +    R         +
Sbjct: 1088 DPASGAQRAVLVGHTRPISGAAFSPDGSLLATCSHDRTARVWDPEAGVERRALVGHSGRI 1147

Query: 215  FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
                FSP+ Q +A           V L D         +     M   P FS +G+   +
Sbjct: 1148 LTVLFSPDGQTIA----TGGAHGTVRLWDVATGADRAVLHGADRMKSRPAFSPDGRFLAV 1203

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            S   D  + +++V +       L           +SP        S  +G  +L+   + 
Sbjct: 1204 SG-PDCTVQLWNV-VTGAEKTVLAGHSGPVTGGLFSPVGGLFA-TSSADGTVRLW--DAM 1258

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 R+      +     +SP G+L+A     G    I +    G 
Sbjct: 1259 TGVAGRVLTGHRGAVAGVAFSPHGELLASGGHDGT---IRIWDVAGG 1302



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 86/252 (34%), Gaps = 22/252 (8%)

Query: 186  SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +G       + D  DGA+ +       Q+     FS + + +A  + D      V L D 
Sbjct: 993  TGSDDTYALIWDVADGADHQARGGHTHQVTET-VFSRDGRLIATGSDDK----TVRLWDV 1047

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                    +  +        FS NG+  L++    +                L       
Sbjct: 1048 ETGAEHPALDGYAGWGNVVAFSPNGR--LLATDCFDNTVRLWDPASGAQRAVLVGHTRPI 1105

Query: 305  ISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              A++SPD S +   S DR  +    V       ++R            ++SP G  IA 
Sbjct: 1106 SGAAFSPDGSLLATCSHDRTAR----VWDPEAGVERRALVGHSGRILTVLFSPDGQTIA- 1160

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                G    + +       +R ++  ++     P +SP GR L  S     D   +L+++
Sbjct: 1161 --TGGAHGTVRLWDVATGADRAVLHGADRMKSRPAFSPDGRFLAVS---GPDCTVQLWNV 1215

Query: 422  DLNGRNETLINT 433
             + G  +T++  
Sbjct: 1216 -VTGAEKTVLAG 1226



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 90/304 (29%), Gaps = 61/304 (20%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY----- 240
           +G    +  + D     +R + P          FSP+   +A  TY  E   R++     
Sbjct: 699 TGASDGTARLWDVATGVVRAVLPGYGGTATTVAFSPDGSTLA--TYGAEGTARLWDAGTG 756

Query: 241 -----------------------------------LMDTRIDRAPKRIGNFRSMILAPRF 265
                                              L D                +    F
Sbjct: 757 TERACLAGHDRAVNALVFSPEEILVATGGQDGTARLWDVVTGAERAAFTGHVGAVTTMAF 816

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G R L++   D    I+     +     LT          +SPD   +V        
Sbjct: 817 SPDG-RLLVTGGADRTARIWR-PGATAEPVVLTGHAGSIKVVRFSPDGRMVV---TGGYD 871

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +  +   D+  +  D +       +SP G L+A     G   ++ +       E  
Sbjct: 872 RTVRLWDAATGDELTVITDYKGRVTGVTFSPDGRLLAVV---GHARSVLLFDLATGVEHA 928

Query: 386 LV--EDSNLQAPTWSPSGRSLIFSRKK------DGDTGSKLYSIDLNGRNETLINTPAYA 437
           ++      +    +SP GR +  S +       +  TG+    +  +GR    +N  A++
Sbjct: 929 ILAGHTGGVSGAVFSPDGRVIATSSEDWTVRLWNSATGTANAILSGHGRP---VNGLAFS 985

Query: 438 SDPQ 441
            D Q
Sbjct: 986 PDGQ 989



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 68/215 (31%), Gaps = 16/215 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A    D        L D         +  +        FS +G     +   
Sbjct: 690 FSPDGRLLATGASDG----TARLWDVATGVVRAVLPGYGGTATTVAFSPDGSTLA-TYGA 744

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +    ++  D  +             ++A  +SP+   +V    ++G  +L+        
Sbjct: 745 EGTARLW--DAGTGTERACLAGHDRAVNALVFSPE-EILVATGGQDGTARLW--DVVTGA 799

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           ++        +     +SP G L+  T  +     I           L     +++   +
Sbjct: 800 ERAAFTGHVGAVTTMAFSPDGRLLV-TGGADRTARIWRPGATAEPVVLTGHAGSIKVVRF 858

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           SP GR ++       D   +L+     G   T+I 
Sbjct: 859 SPDGRMVV---TGGYDRTVRLWDA-ATGDELTVIT 889



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 18/194 (9%)

Query: 248 RAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFI 303
           + P ++  F      +    FS +G+    +   D    ++  D+ +      L      
Sbjct: 670 KNPTQLRAFAGHTAPVGMVVFSPDGRLLA-TGASDGTARLW--DVATGVVRAVLPGYGGT 726

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + ++SPD S +      EG  +L+   +    ++      + +    V+SP+  L+A 
Sbjct: 727 ATTVAFSPDGSTLA-TYGAEGTARLW--DAGTGTERACLAGHDRAVNALVFSPEEILVAT 783

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               G      +       ER         +    +SP GR L+       D  ++++  
Sbjct: 784 GGQDGTA---RLWDVVTGAERAAFTGHVGAVTTMAFSPDGRLLV---TGGADRTARIWRP 837

Query: 422 DLNGRNETLINTPA 435
                   L     
Sbjct: 838 GATAEPVVLTGHAG 851


>gi|115373543|ref|ZP_01460839.1| peptidase C14, caspase catalytic subunit p20 [Stigmatella
           aurantiaca DW4/3-1]
 gi|310825099|ref|YP_003957457.1| wd-40 repeat containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|115369385|gb|EAU68324.1| peptidase C14, caspase catalytic subunit p20 [Stigmatella
           aurantiaca DW4/3-1]
 gi|309398171|gb|ADO75630.1| WD-40 repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1440

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 54/320 (16%), Positives = 113/320 (35%), Gaps = 31/320 (9%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF--NSRILFVSESVVSGIIKNS 192
           D + ++     + P+   +    ++    +SI      F  +  ++ V  S+ S     +
Sbjct: 679 DGQTVLSLA-SAEPSLLTRQGKRLATLGMKSIHVHHAQFSPDGEVIAVIPSLSSPDRSVA 737

Query: 193 LCVMDRDGANIRYLTPS-RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
             + ++ G  +  L      Q      FSP+ Q +  +       L ++ +         
Sbjct: 738 AYLFNKRGERLSTLQQEENGQPASCAEFSPDGQWILTSRTHAG--LSLWKISGERVAQVS 795

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             G +        FS +G + L+   +     ++  + +S    +L       I   +SP
Sbjct: 796 VGGGWPYGD----FSPDGTQILVIASESRTAALW--NPRSREVRQLEGHDHRIIRGRWSP 849

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             SQ    + R+   +++     G     ++    A   D  +SP G  +          
Sbjct: 850 -GSQHALTAARDNTARIW--DREGQCVATLT-GHTAPLSDGAFSPSGKRVLTVSEDRTA- 904

Query: 372 AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
              V    G   R+L + +  L+  +WSPSGR L+ + + DG     ++    +G+  + 
Sbjct: 905 --RVWDLTGKILRVLNDANVALRQGSWSPSGRHLL-AEEADGT----VHVYRADGKRLST 957

Query: 431 INTP------AYASDPQWVG 444
           +  P        +S P W  
Sbjct: 958 LRLPDPPDWMGRSSFPTWTP 977



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 82/233 (35%), Gaps = 24/233 (10%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L +    G  +  ++        +  FSP+  ++     +        L + R     + 
Sbjct: 781 LSLWKISGERVAQVSVGGGWPYGD--FSPDGTQILVIASESRTAA---LWNPRSREVRQL 835

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            G+   +I   R+S  G +  ++  +D    I+  D +      LT         ++SP 
Sbjct: 836 EGHDHRIIRG-RWSP-GSQHALTAARDNTARIW--DREGQCVATLTGHTAPLSDGAFSPS 891

Query: 313 SSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             +++  S DR  +    V    G    R+  D   +     WSP G  +   +  G   
Sbjct: 892 GKRVLTVSEDRTAR----VWDLTG-KILRVLNDANVALRQGSWSPSGRHLLAEEADGT-- 944

Query: 372 AIGVMKKDGSQERLLVED------SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            + V + DG +   L              PTW+P G SL+ SR       ++L
Sbjct: 945 -VHVYRADGKRLSTLRLPDPPDWMGRSSFPTWTPEGGSLLTSRLDHATRAARL 996



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 83/235 (35%), Gaps = 31/235 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---V 276
           SP+ Q V      +  +L      TR  +    +G     +   +FS +G+   +     
Sbjct: 677 SPDGQTVLSLASAEPSLL------TRQGKRLATLGMKSIHVHHAQFSPDGEVIAVIPSLS 730

Query: 277 QKDEAMDIYSVDLQSNATERL-TNTLFINISAS----YSPDSSQIVFESDREGKEQLYVM 331
             D ++  Y  + +    ERL T     N   +    +SPD   I+      G   L + 
Sbjct: 731 SPDRSVAAYLFNKRG---ERLSTLQQEENGQPASCAEFSPDGQWILTSRTHAG---LSLW 784

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDS 390
           + +G    ++S      Y D  +SP G  I          A+        + R L   D 
Sbjct: 785 KISGERVAQVSVGGGWPYGD--FSPDGTQILVIASESRTAALW--NPRSREVRQLEGHDH 840

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
            +    WSP  +  + + +   D  ++++  D  G+   TL    A  SD  +  
Sbjct: 841 RIIRGRWSPGSQHALTAAR---DNTARIW--DREGQCVATLTGHTAPLSDGAFSP 890



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 66/177 (37%), Gaps = 22/177 (12%)

Query: 145  FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
               P   R +    + DI   +    G   +R L VS   V        C+ D  G  +R
Sbjct: 1000 TVEPEPARAL-RRHAMDIQHVVPQPGG---TRFLTVSFDKV--------CLWDAQGTLLR 1047

Query: 205  YLTP-----SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
             L P     +     +   ++P   +  + TY     ++++  +  +  A +  G  +  
Sbjct: 1048 ELEPPPGESNTSVSFWNACWAPGGDR--FLTYGSHIPVQLWDGEGHLLLAFQGEGPHQRS 1105

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            +    F  +G + L ++  D +  ++S  L+     RL +  +     ++SP   ++
Sbjct: 1106 LRHACFRPDGTQVL-TLSTDGSGRLWS--LEGREVARLGDHYWGAEYGAFSPSGDRV 1159



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 51/147 (34%), Gaps = 19/147 (12%)

Query: 312 DSSQI--VFESDREGKEQLYVMQSNGS----DQKRISQDKEASYFDPV--WSPQGDLIAF 363
           D S     F    +G+  L +  +  S      KR++     S       +SP G++IA 
Sbjct: 666 DGSSASSAFCLSPDGQTVLSLASAEPSLLTRQGKRLATLGMKSIHVHHAQFSPDGEVIAV 725

Query: 364 T---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSK 417
                      A  +  K G +   L ++ N Q  +   +SP G+ ++ SR   G     
Sbjct: 726 IPSLSSPDRSVAAYLFNKRGERLSTLQQEENGQPASCAEFSPDGQWILTSRTHAG---LS 782

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           L+ I   G     ++         +  
Sbjct: 783 LWKIS--GERVAQVSVGGGWPYGDFSP 807


>gi|332829074|gb|EGK01738.1| hypothetical protein HMPREF9455_01886 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 693

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 94/257 (36%), Gaps = 62/257 (24%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTL 301
             P+ + +F   +   + S +  + L  V      Q     +++++++  +  +++T T 
Sbjct: 42  MTPEVLYSF-GRVSDVQVSPDKSKVLYGVTYVSIEQNKTNRELFTMNIDGSDKKQITQTA 100

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +A +    S+I F S   G  Q++ M  +G+++ +IS + E       +SP    I
Sbjct: 101 KSENNAVWIKGGSKIAFLSSESGSSQIWEMNPDGTERMQIS-EIEGGVNGFSYSPDEKKI 159

Query: 362 AFTK------FSGEKF---------------------------AIGVMKKDGSQERL--- 385
            + K       + +K+                              V   DG++      
Sbjct: 160 LYIKNIKFGERTADKYPDLPKASGRIIDDLMYKHWSEWVEEIPHSFVADYDGTKITEGID 219

Query: 386 LVEDSNLQAP----------TWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNET 429
           ++ D   + P           WSP  +S+ ++ RKK G      T S +Y  +++ +   
Sbjct: 220 ILGDEPYECPMLPFGGTEQLAWSPDSKSIAYTCRKKKGMEYALSTNSDIYLYNIDTKETK 279

Query: 430 LINTP--AYASDPQWVG 444
            +      Y  +P +  
Sbjct: 280 NLTEGMMGYDINPVFSP 296



 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 75/252 (29%), Gaps = 59/252 (23%)

Query: 220 SPNQQKV----AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP++ KV     Y + +     R            K+I           +   G +    
Sbjct: 59  SPDKSKVLYGVTYVSIEQNKTNRELFTMNIDGSDKKQITQTAKSENNAVWIKGGSKIAFL 118

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------------- 321
             +  +  I+ ++       +++         SYSPD  +I++  +              
Sbjct: 119 SSESGSSQIWEMNPDGTERMQISEIEGGVNGFSYSPDEKKILYIKNIKFGERTADKYPDL 178

Query: 322 --REGK-----------------EQLYVMQSNGSD-QKRISQDKEASYFDP--------- 352
               G+                    +V   +G+   + I    +  Y  P         
Sbjct: 179 PKASGRIIDDLMYKHWSEWVEEIPHSFVADYDGTKITEGIDILGDEPYECPMLPFGGTEQ 238

Query: 353 -VWSPQGDLIAFTKFSGEKFA--------IGVMKKDGSQERLLVED--SNLQAPTWSPSG 401
             WSP    IA+T    +           I +   D  + + L E        P +SP G
Sbjct: 239 LAWSPDSKSIAYTCRKKKGMEYALSTNSDIYLYNIDTKETKNLTEGMMGYDINPVFSPDG 298

Query: 402 RSLIF-SRKKDG 412
           + + + S ++DG
Sbjct: 299 KYIAWQSMERDG 310



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 84/252 (33%), Gaps = 34/252 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP----- 217
           Y  +    G     +++   S     I +S  V D DG     +T   D +  EP     
Sbjct: 175 YPDLPKASGRIIDDLMYKHWSEWVEEIPHS-FVADYDGT---KITEGIDILGDEPYECPM 230

Query: 218 ---------RFSPNQQKVAYATYDDEDILR-------VYLMDTRIDRAPKRIGNFRSMIL 261
                     +SP+ + +AY     + +         +YL +                 +
Sbjct: 231 LPFGGTEQLAWSPDSKSIAYTCRKKKGMEYALSTNSDIYLYNIDTKETKNLTEGMMGYDI 290

Query: 262 APRFSSNGKRALI-SVQKDEAMD----IYSVDLQSNATERLTNTLFINIS-ASYSPDSSQ 315
            P FS +GK     S+++D        ++ V+L +N    +T     N    +++ D+  
Sbjct: 291 NPVFSPDGKYIAWQSMERDGYESDKNRMFVVNLATNDKIYVTEKFDYNTDYLAWN-DNES 349

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           I F S  E K  ++    +  +  RI++  +  Y     +    LIA          I  
Sbjct: 350 IYFVSCVEAKTHIFKAFVHTKEINRITK-GDYDYESFGIAGD-KLIATRHSLSAPNEIYS 407

Query: 376 MKKDGSQERLLV 387
           +     +   L 
Sbjct: 408 VNTTNGEATELS 419



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/364 (12%), Positives = 109/364 (29%), Gaps = 76/364 (20%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW--RKIAHTISDDIYQSIT 167
            L+ G  +     +   +    + ++   +IGK            ++ ++        ++
Sbjct: 2   ALLLGASVVSCGGKFSAKIE--NTEEDAPLIGKATVKVENGIMTPEVLYSFGRVSDVQVS 59

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            +K      + +VS           L  M+ DG++ + +T +         +     K+A
Sbjct: 60  PDKSKVLYGVTYVSIE--QNKTNRELFTMNIDGSDKKQITQTAKSENNA-VWIKGGSKIA 116

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------------- 274
           + + +     +++ M+        +I      +    +S + K+ L              
Sbjct: 117 FLSSESGSS-QIWEMNPD-GTERMQISEIEGGVNGFSYSPDEKKILYIKNIKFGERTADK 174

Query: 275 --------------------SVQKDEAMDIYSVDLQSNATERLTNTLFI-NISA------ 307
                               S   +E    +  D       ++T  + I           
Sbjct: 175 YPDLPKASGRIIDDLMYKHWSEWVEEIPHSFVADYDG---TKITEGIDILGDEPYECPML 231

Query: 308 --------SYSPDSSQIVFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                   ++SPDS  I +                 +Y+   +  + K +++       +
Sbjct: 232 PFGGTEQLAWSPDSKSIAYTCRKKKGMEYALSTNSDIYLYNIDTKETKNLTEGMMGYDIN 291

Query: 352 PVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSL 404
           PV+SP G  IA+     + +      + V+    + +  + E  D N     W     S+
Sbjct: 292 PVFSPDGKYIAWQSMERDGYESDKNRMFVVNLATNDKIYVTEKFDYNTDYLAW-NDNESI 350

Query: 405 IFSR 408
            F  
Sbjct: 351 YFVS 354


>gi|298244050|ref|ZP_06967857.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297557104|gb|EFH90968.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 646

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 84/218 (38%), Gaps = 39/218 (17%)

Query: 266 SSNGKRALISV----QKDEAMD--IYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVF 318
           S +GKR   ++    ++DE  +  I+           + T     + S  + PD + + F
Sbjct: 21  SPDGKRIAYTLGALCKRDEHAESAIWLATTDGAEAPRQFTAGGVQDKSPQWEPDGNALAF 80

Query: 319 ESDR--EGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFS-------- 367
            SDR   G  QLY++ +NG + + ++ ++ +       WSP G  IAFT           
Sbjct: 81  LSDRVERGTAQLYLISANGGEAQALTPRENKRGVVLFAWSPGGGQIAFTSVDEPDEEDER 140

Query: 368 -----------GEKF---AIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG 412
                      GEK+    + ++     +   LV    ++    W P GR L ++  K  
Sbjct: 141 REKERDDAQVYGEKWPYARLRLLSLASREVSTLVAGERHVANFAWHPQGRELAYTTWKTP 200

Query: 413 DTGSK-----LYSIDLNGRNETLI-NTPAYASDPQWVG 444
           +  S      +  I L G    ++ +    AS+  W  
Sbjct: 201 ELNSSVQETVIERISLAGGEPQVVCHFAYGASNLTWSA 238



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 92/265 (34%), Gaps = 44/265 (16%)

Query: 212 QILFEPRFSPNQQKVAYA-----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           QI  + + SP+ +++AY        D+     ++L  T    AP++         +P++ 
Sbjct: 13  QIPQDIQISPDGKRIAYTLGALCKRDEHAESAIWLATTDGAEAPRQFTAGGVQDKSPQWE 72

Query: 267 SNGKRALISVQK--DEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFES- 320
            +G        +       +Y +       + LT   N   + +  ++SP   QI F S 
Sbjct: 73  PDGNALAFLSDRVERGTAQLYLISANGGEAQALTPRENKRGV-VLFAWSPGGGQIAFTSV 131

Query: 321 ---------------------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                                ++    +L ++     +   +    E    +  W PQG 
Sbjct: 132 DEPDEEDERREKERDDAQVYGEKWPYARLRLLSLASREVSTLV-AGERHVANFAWHPQGR 190

Query: 360 LIAFTKFSGEKFA-------IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR--K 409
            +A+T +   +         I  +   G + +++          TWS  G +L+F+    
Sbjct: 191 ELAYTTWKTPELNSSVQETVIERISLAGGEPQVVCHFAYGASNLTWSADGETLLFTSATA 250

Query: 410 KDGDTGSKLYSIDLNGRNETLINTP 434
           +   + + +Y++  +G     +   
Sbjct: 251 QRDQSSTAVYAVPASGGEPKRLAGG 275



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/240 (10%), Positives = 72/240 (30%), Gaps = 38/240 (15%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           ++++ +   DGA       +       P++ P+   +A+ +   E       + +     
Sbjct: 42  ESAIWLATTDGAEAPRQFTAGGVQDKSPQWEPDGNALAFLSDRVERGTAQLYLISANGGE 101

Query: 250 PKRIG---NFRSMILAPRFSSNGKRALISV----------------------QKDEAMDI 284
            + +    N R ++L   +S  G +   +                       +K     +
Sbjct: 102 AQALTPRENKRGVVLF-AWSPGGGQIAFTSVDEPDEEDERREKERDDAQVYGEKWPYARL 160

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-------KEQLYVMQSNGSD 337
             + L S     L        + ++ P   ++ + + +         +  +  +   G +
Sbjct: 161 RLLSLASREVSTLVAGERHVANFAWHPQGRELAYTTWKTPELNSSVQETVIERISLAGGE 220

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            + +      +  +  WS  G+ + FT           A+  +   G + + L       
Sbjct: 221 PQVVCHFAYGA-SNLTWSADGETLLFTSATAQRDQSSTAVYAVPASGGEPKRLAGGETNC 279



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 13/103 (12%)

Query: 354 WSPQGDLIAFT------KFSGEKFAIGVMKKDGSQ-ERLLVEDS-NLQAPTWSPSGRSLI 405
            SP G  IA+T      +    + AI +   DG++  R         ++P W P G +L 
Sbjct: 20  ISPDGKRIAYTLGALCKRDEHAESAIWLATTDGAEAPRQFTAGGVQDKSPQWEPDGNALA 79

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP----QWVG 444
           F   +     ++LY I  NG     + TP           W  
Sbjct: 80  FLSDRVERGTAQLYLISANGGEAQAL-TPRENKRGVVLFAWSP 121


>gi|298246390|ref|ZP_06970196.1| WD40 repeat domain containing protein [Ktedonobacter racemifer DSM
           44963]
 gi|297553871|gb|EFH87736.1| WD40 repeat domain containing protein [Ktedonobacter racemifer DSM
           44963]
          Length = 509

 Score = 86.6 bits (213), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 99/255 (38%), Gaps = 12/255 (4%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F++  + ++ +  S +         +  ++++  +     +     +SP+ + +A +  +
Sbjct: 249 FDTSSVVLNTNGTSPLNATGTAHTSKLLSSMQPFSGGGGAMFGALTWSPDSKYLAASATN 308

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           D     V + +       K + +F   IL   +S +      +     AM    V L   
Sbjct: 309 DPATNLVSIWNASNGSQVKSLTDFHGRILDLHWSPDDSWLATTAYP--AMVSPEVKLWDT 366

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQS-NGSDQKRISQDKEASYF 350
            T ++       +   +SP+  Q+     ++G  + + ++ + +G   K+ +Q  E    
Sbjct: 367 KTWQVKKQYANVVRLDWSPNGKQLALVDAQDGNGKDVRIVDALSGQTTKQFAQVGEGMVM 426

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSL--- 404
              WSP G  IA        F + +        +LL   S+  + +   WSP  + L   
Sbjct: 427 AVHWSPDGSRIAVETQDSAGFKMTITLWSAQSGKLLYTFSSQHSISDVAWSPDSKYLSSL 486

Query: 405 --IFSRKKDGDTGSK 417
             I+ + K+G+T +K
Sbjct: 487 ESIYVKDKNGNTITK 501



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 84/266 (31%), Gaps = 47/266 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-FRSMILAPRFSSNGKRALISVQ 277
           +SP+  +VA          +V   D R  R  +         +    +S +G    I+  
Sbjct: 174 WSPDGSRVAAVING-----QVESWDARTGRHVQIYHLMLNPFVWNMAWSPDGNILAINSY 228

Query: 278 KDEAMDIYSVDLQSNATERLTNTLF-----INISA------------------------- 307
            + +  I  V+ ++ A     +T          S                          
Sbjct: 229 SNTSAKIDLVNTKTGALLHTFDTSSVVLNTNGTSPLNATGTAHTSKLLSSMQPFSGGGGA 288

Query: 308 -----SYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                ++SPDS  +   +  +    L  +  ++   Q +   D      D  WSP    +
Sbjct: 289 MFGALTWSPDSKYLAASATNDPATNLVSIWNASNGSQVKSLTDFHGRILDLHWSPDDSWL 348

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A T +     +  V   D    ++  + +N+    WSP+G+ L     +DG+ G  +  +
Sbjct: 349 ATTAY-PAMVSPEVKLWDTKTWQVKKQYANVVRLDWSPNGKQLALVDAQDGN-GKDVRIV 406

Query: 422 D-LNGRNETLINTPAYASDPQ--WVG 444
           D L+G+                 W  
Sbjct: 407 DALSGQTTKQFAQVGEGMVMAVHWSP 432



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 52/176 (29%), Gaps = 42/176 (23%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTK 365
           A +SPD S++          Q+    +      +I         ++  WSP G+++A   
Sbjct: 172 AVWSPDGSRVAAVI----NGQVESWDARTGRHVQIYHLMLNPFVWNMAWSPDGNILAINS 227

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDS------NLQAP------------------------ 395
           +S     I ++           + S      N  +P                        
Sbjct: 228 YSNTSAKIDLVNTKTGALLHTFDTSSVVLNTNGTSPLNATGTAHTSKLLSSMQPFSGGGG 287

Query: 396 ------TWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTPAYASDPQWVG 444
                 TWSP  + L  S   D  T    +++     + ++L +      D  W  
Sbjct: 288 AMFGALTWSPDSKYLAASATNDPATNLVSIWNASNGSQVKSLTDFHGRILDLHWSP 343


>gi|271965515|ref|YP_003339711.1| hypothetical protein Sros_4060 [Streptosporangium roseum DSM 43021]
 gi|270508690|gb|ACZ86968.1| hypothetical protein Sros_4060 [Streptosporangium roseum DSM 43021]
          Length = 1059

 Score = 86.2 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 70/190 (36%), Gaps = 28/190 (14%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G R + + + D    ++ V +      RLT  +       +SP   Q+ F    EG E++
Sbjct: 12  GDRVVFAAEDD----LWMVPVTGGRAFRLTAGVAEAGYPRFSPCGDQLAFAGREEGPEEV 67

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDGSQER 384
           YVM ++G   +RI+     S     W P G  + +     + F     +  +  DG  ER
Sbjct: 68  YVMPADGGAARRITYHGARSTVTG-WDPDG-AVLYASDESQPFEGQKWLHRIHPDGIPER 125

Query: 385 LLVEDSNLQAPTWSPSGRSLI----------FSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           L    +N  +      G  ++          + R + G  G  L+          LI  P
Sbjct: 126 LPYGPANSISY-----GPQIVLGRNTADPARWKRYRGGTVG-DLWI--GTEEFRRLIALP 177

Query: 435 AYASDPQWVG 444
              + P W G
Sbjct: 178 GNLASPCWAG 187



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 83/222 (37%), Gaps = 33/222 (14%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             +V +A  DD        M         R+    +    PRFS  G +   + +++   
Sbjct: 12  GDRVVFAAEDD------LWMVPVTGGRAFRLTAGVAEAGYPRFSPCGDQLAFAGREEGPE 65

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQ 338
           ++Y +     A  R+T     +    + PD + +++ SD      G++ L+ +  +G  +
Sbjct: 66  EVYVMPADGGAARRITYHGARSTVTGWDPDGA-VLYASDESQPFEGQKWLHRIHPDGIPE 124

Query: 339 KRISQDKEASYFDPVWSPQ---GDLIA----FTKFSGEKF-AIGVMKKDGSQE--RLLVE 388
           +              + PQ   G   A    + ++ G     + +    G++E  RL+  
Sbjct: 125 RL----PYGPANSISYGPQIVLGRNTADPARWKRYRGGTVGDLWI----GTEEFRRLIAL 176

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             NL +P W+  G  + F    +G     +YS   +G +   
Sbjct: 177 PGNLASPCWA--GERVYFISDHEG--VGNVYSCTADGGDLRR 214



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/298 (16%), Positives = 96/298 (32%), Gaps = 44/298 (14%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT----- 230
           R+ F+S+    G     +     DG ++R  +   D        S +  ++ Y       
Sbjct: 189 RVYFISDHEGVGN----VYSCTADGGDLRRHSDHADYYARN--LSGDGHRLVYHAGAELY 242

Query: 231 -YDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK------DEAM 282
             +D +  RV + + +   +  +R       + +   S +G    I+ +       D   
Sbjct: 243 LVEDGESHRVEVCLRSSRTQRNRRFAAAEDFLDSATLSPDGSGLAITTRGKAFSFADWEG 302

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRI 341
            +           RL   L        + D   I   SD   +E L ++ ++GS +  ++
Sbjct: 303 PVRQHGAPYGVRYRLLTWL--------NDDERLIAAASDDGDREVLSILTADGSAEPVQL 354

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-------SNLQA 394
                        SP+ D +A      E   + V+   G                  ++ 
Sbjct: 355 DHLDTGRVTALEVSPKDDRVAIANHRNE---LLVVDLTGGTVTGARSTVIDASRFGAIED 411

Query: 395 PTWSPSGRSLIFS-RKKDGDTGSKLYSIDLN-----GRNETLINTPAYASDPQWVGFM 446
             WSP GR L ++ R        KL  I+        R     + PA+     ++ F+
Sbjct: 412 LAWSPDGRWLAYACRDTAQTMAVKLCRIETGETFFATRPVLWDSGPAFDPGGDYLYFI 469



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 79/240 (32%), Gaps = 33/240 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAP-----KRIG--NFRSMILAPRFSSNGKRA 272
           SP+   +A  T         +    R   AP     + +   N    ++A   S +G R 
Sbjct: 280 SPDGSGLAITTRGKAFSFADWEGPVRQHGAPYGVRYRLLTWLNDDERLIAAA-SDDGDRE 338

Query: 273 LIS-VQKDEAMDIYSVD-LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           ++S +  D + +   +D L +     L            SP   ++   + R    +L V
Sbjct: 339 VLSILTADGSAEPVQLDHLDTGRVTAL----------EVSPKDDRVAIANHR---NELLV 385

Query: 331 MQSNGSDQKR-----ISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQER 384
           +   G          I   +  +  D  WSP G  +A+  + + +  A+ + + +  +  
Sbjct: 386 VDLTGGTVTGARSTVIDASRFGAIEDLAWSPDGRWLAYACRDTAQTMAVKLCRIETGETF 445

Query: 385 LLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
                    + P + P G  L F  ++  +        DL    G     I   A    P
Sbjct: 446 FATRPVLWDSGPAFDPGGDYLYFIGQRVFNPVYDELQFDLGFPLGSRPYAIGLRADVRSP 505



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 45/141 (31%), Gaps = 3/141 (2%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                +  L ++  DG+         D   +     SP   +VA A + +E ++      
Sbjct: 332 SDDGDREVLSILTADGSAEPVQLDHLDTGRVTALEVSPKDDRVAIANHRNELLVVDLTGG 391

Query: 244 TRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTL 301
           T        I  +    I    +S +G+    + +         +  +++  T   T  +
Sbjct: 392 TVTGARSTVIDASRFGAIEDLAWSPDGRWLAYACRDTAQTMAVKLCRIETGETFFATRPV 451

Query: 302 FINISASYSPDSSQIVFESDR 322
             +   ++ P    + F   R
Sbjct: 452 LWDSGPAFDPGGDYLYFIGQR 472



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 62/205 (30%), Gaps = 19/205 (9%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL--WDVKDRKQI 139
           +S D     IT       F DW          G V + G     V +RL  W   D + I
Sbjct: 279 LSPDGSGLAITTRGKAFSFADWE---------GPVRQHGA-PYGVRYRLLTWLNDDERLI 328

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GIIKNSLCVMD- 197
                         +    S +  Q    + G   +  +   +  V+    +N L V+D 
Sbjct: 329 AAASDDGDREVLSILTADGSAEPVQLDHLDTGRVTALEVSPKDDRVAIANHRNELLVVDL 388

Query: 198 ----RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
                 GA    +  SR   + +  +SP+ + +AYA  D    + V L            
Sbjct: 389 TGGTVTGARSTVIDASRFGAIEDLAWSPDGRWLAYACRDTAQTMAVKLCRIETGETFFA- 447

Query: 254 GNFRSMILAPRFSSNGKRALISVQK 278
                    P F   G       Q+
Sbjct: 448 TRPVLWDSGPAFDPGGDYLYFIGQR 472


>gi|145548369|ref|XP_001459865.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427692|emb|CAK92468.1| unnamed protein product [Paramecium tetraurelia]
          Length = 735

 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 53/351 (15%), Positives = 116/351 (33%), Gaps = 41/351 (11%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQ---IIGKKFFSSPASWRKIAHTISD----------DIY 163
                       RLWDVK  +Q   + G     +  ++     T++           D+ 
Sbjct: 83  TTLASGSDDNSIRLWDVKTGQQKAKLDGHSASVTSVNFSPDGSTLASGSDDKSIRLWDVK 142

Query: 164 QSITGEKGDFNSRILFVSESVVSGII-----KNSLCVMDRDGANIRYLTPSRDQILFEPR 218
                 + D +++ ++       G         S+ + D      +         +    
Sbjct: 143 TGQQKAQLDGHTKTVYSVCFSPDGTNLASGSDKSIRLWDAKTGQQKAKLKGHSTSVSSIN 202

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+   +A  +YD+     + L D +  +    +      + +  FS +G     S   
Sbjct: 203 FSPDGTTLASGSYDN----SIRLWDVKTGQQKAELDGHSDYVRSVNFSPDGTTLA-SGSD 257

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D+++ ++  D+++   + +         S  +S D   +   SD      + +       
Sbjct: 258 DKSIRLW--DVKTGQQKAKFDGHSNWVKSVQFSTDGLTLASGSD---DNSIRLWDVKTGQ 312

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           QK        S     +SP G  +A   +      +  +K       L    +++ +  +
Sbjct: 313 QKAKLDGHSTSVSSINFSPDGTTLASGSYDNS-IRLWDVKTGQQNANLDGHSNSVNSVCF 371

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSI-------DLNGRNETLINTPAYASDPQ 441
           SP G +L        D   +L+ +        L+G +ET+ +   ++ D  
Sbjct: 372 SPDGTTLA---SGSLDNSIRLWDVKTGQQKAKLDGHSETVYSVN-FSPDGT 418



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 81/206 (39%), Gaps = 20/206 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+   +A  + D+     + L D +  +   ++    + + +  FS +G     S   
Sbjct: 78  FSPDGTTLASGSDDN----SIRLWDVKTGQQKAKLDGHSASVTSVNFSPDGSTLA-SGSD 132

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D+++ ++  D+++   + +L        S  +SPD + +   SD+     + +  +    
Sbjct: 133 DKSIRLW--DVKTGQQKAQLDGHTKTVYSVCFSPDGTNLASGSDKS----IRLWDAKTGQ 186

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT- 396
           QK   +    S     +SP G  +A   +      I +      Q++  ++  +    + 
Sbjct: 187 QKAKLKGHSTSVSSINFSPDGTTLASGSYDNS---IRLWDVKTGQQKAELDGHSDYVRSV 243

Query: 397 -WSPSGRSLIFSRKKDGDTGSKLYSI 421
            +SP G +L        D   +L+ +
Sbjct: 244 NFSPDGTTLASGSD---DKSIRLWDV 266



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 105/309 (33%), Gaps = 31/309 (10%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQ---IIGKKFFSSPASWRKIAHTIS---DDIYQSI---- 166
                       RLWDVK  +Q   + G   +    ++     T++   DD    +    
Sbjct: 208 TTLASGSYDNSIRLWDVKTGQQKAELDGHSDYVRSVNFSPDGTTLASGSDDKSIRLWDVK 267

Query: 167 -------TGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                       ++   + F ++  ++ SG   NS+ + D      +         +   
Sbjct: 268 TGQQKAKFDGHSNWVKSVQFSTDGLTLASGSDDNSIRLWDVKTGQQKAKLDGHSTSVSSI 327

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A  +YD+     + L D +  +    +    + + +  FS +G     S  
Sbjct: 328 NFSPDGTTLASGSYDN----SIRLWDVKTGQQNANLDGHSNSVNSVCFSPDGTTLA-SGS 382

Query: 278 KDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D ++ ++  D+++   + +L        S ++SPD + +   S+      +        
Sbjct: 383 LDNSIRLW--DVKTGQQKAKLDGHSETVYSVNFSPDGTTLASGSE---DNSIRFWDVKTG 437

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            QK              +S  G  +A +  S +   +  +K      +L      +++  
Sbjct: 438 QQKAKLDGHSNWVKSVQFSTDGLTLA-SGSSDKSIHLWDVKTGQQLAKLDGHTDQVKSVQ 496

Query: 397 WSPSGRSLI 405
           + P G  L 
Sbjct: 497 FCPDGTILA 505



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 104/306 (33%), Gaps = 38/306 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                  L    RLWDVK  +Q                 H  S+ +Y       G     
Sbjct: 376 TTLASGSLDNSIRLWDVKTGQQKAKLD-----------GH--SETVYSVNFSPDG----- 417

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG   NS+   D      +         +   +FS +   +A  + D    
Sbjct: 418 -----TTLASGSEDNSIRFWDVKTGQQKAKLDGHSNWVKSVQFSTDGLTLASGSSDK--- 469

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATE 295
             ++L D +  +   ++      + + +F  +G   L S   D+++  +  D+++     
Sbjct: 470 -SIHLWDVKTGQQLAKLDGHTDQVKSVQFCPDGT-ILASGSSDKSIRFW--DIKTEQQLA 525

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L        S  +SPD   +V  S     + + +  +    QK      +   +   +S
Sbjct: 526 KLDGHTNEVNSVCFSPDGILLVSGSQ---DKSIRIWDAKTGQQKAKLYGYKMIVYSVYFS 582

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P G  +A +  + +   +  +K      +L    +   +  +SP G ++        D+ 
Sbjct: 583 PDGTTLA-SGSNDKSIRLWDVKTGKQFAKLDGHSNCFNSVCFSPDGTTVASGSD---DSS 638

Query: 416 SKLYSI 421
            +L+ I
Sbjct: 639 IRLWDI 644



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 71/191 (37%), Gaps = 16/191 (8%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYS 310
           R+    + + +  FS +G     S   D ++ ++  D+++   + +L        S ++S
Sbjct: 65  RLDGHTNCVNSVCFSPDGTTLA-SGSDDNSIRLW--DVKTGQQKAKLDGHSASVTSVNFS 121

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD S +   SD    + + +       QK        + +   +SP G  +A    SG  
Sbjct: 122 PDGSTLASGSD---DKSIRLWDVKTGQQKAQLDGHTKTVYSVCFSPDGTNLA----SGSD 174

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +I +      Q++  ++  +    +  +SP G +L        D   +L+ +    +  
Sbjct: 175 KSIRLWDAKTGQQKAKLKGHSTSVSSINFSPDGTTLASGSY---DNSIRLWDVKTGQQKA 231

Query: 429 TLINTPAYASD 439
            L     Y   
Sbjct: 232 ELDGHSDYVRS 242


>gi|170077291|ref|YP_001733929.1| putative lipoprotein [Synechococcus sp. PCC 7002]
 gi|169884960|gb|ACA98673.1| lipoprotein, putative [Synechococcus sp. PCC 7002]
          Length = 176

 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 6/138 (4%)

Query: 248 RAPKRIGNFRSMILA---PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             P+      +   A   P +S +G+    + ++D   +I+  DLQ+N    L N    +
Sbjct: 38  YQPQIATGGINSNFAEEFPSYSGDGRYLAFASERDGRRNIFLYDLQTNQLVNLPNLNRRD 97

Query: 305 IS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            S      S D   I + S   G++ ++V   N    + ++ +   S  +P  S  G  +
Sbjct: 98  SSQDQPDLSEDGRFIAYVSTERGRQDVFVYDRNQGRSQLLTVNLRGSVQNPTISGDGRRV 157

Query: 362 AFTKFSGEKFAIGVMKKD 379
           AF      ++ + ++   
Sbjct: 158 AFQSNERGQWNLMLVDVT 175



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 4/127 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           N+ F     SYS D   + F S+R+G+  +++     +    +     +++S   P  S 
Sbjct: 48  NSNFAEEFPSYSGDGRYLAFASERDGRRNIFLYDLQTNQLVNLPNLNRRDSSQDQPDLSE 107

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  IA+      +  + V  ++  + +LL  +   ++Q PT S  GR + F   + G  
Sbjct: 108 DGRFIAYVSTERGRQDVFVYDRNQGRSQLLTVNLRGSVQNPTISGDGRRVAFQSNERGQW 167

Query: 415 GSKLYSI 421
              L  +
Sbjct: 168 NLMLVDV 174



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 50/127 (39%), Gaps = 2/127 (1%)

Query: 209 SRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           + +     P +S + + +A+A+  D    + +Y + T        +    S    P  S 
Sbjct: 48  NSNFAEEFPSYSGDGRYLAFASERDGRRNIFLYDLQTNQLVNLPNLNRRDSSQDQPDLSE 107

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKE 326
           +G+       +    D++  D     ++ LT N      + + S D  ++ F+S+  G+ 
Sbjct: 108 DGRFIAYVSTERGRQDVFVYDRNQGRSQLLTVNLRGSVQNPTISGDGRRVAFQSNERGQW 167

Query: 327 QLYVMQS 333
            L ++  
Sbjct: 168 NLMLVDV 174



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 15/122 (12%)

Query: 338 QKRISQDKEASYFD---PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DS 390
           Q +I+     S F    P +S  G  +AF      +  I +     +Q   L      DS
Sbjct: 39  QPQIATGGINSNFAEEFPSYSGDGRYLAFASERDGRRNIFLYDLQTNQLVNLPNLNRRDS 98

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL-------INTPAYASDPQWV 443
           +   P  S  GR + +   + G     +Y  +  GR++ L       +  P  + D + V
Sbjct: 99  SQDQPDLSEDGRFIAYVSTERGRQDVFVYDRN-QGRSQLLTVNLRGSVQNPTISGDGRRV 157

Query: 444 GF 445
            F
Sbjct: 158 AF 159



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 14/117 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYL-------------TPSRDQILFEPRFSPNQQKVAYATYD 232
           SG  +      +RDG    +L                RD    +P  S + + +AY + +
Sbjct: 59  SGDGRYLAFASERDGRRNIFLYDLQTNQLVNLPNLNRRDSSQDQPDLSEDGRFIAYVSTE 118

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                 V++ D    R+     N R  +  P  S +G+R      +    ++  VD+
Sbjct: 119 RGR-QDVFVYDRNQGRSQLLTVNLRGSVQNPTISGDGRRVAFQSNERGQWNLMLVDV 174


>gi|134299217|ref|YP_001112713.1| WD40 domain-containing protein [Desulfotomaculum reducens MI-1]
 gi|134051917|gb|ABO49888.1| WD40 domain protein beta Propeller [Desulfotomaculum reducens MI-1]
          Length = 489

 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 59/328 (17%), Positives = 113/328 (34%), Gaps = 60/328 (18%)

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSS---PASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           RL+VE R   +  +K+I+ +    +    A+ RKIA T    ++QS         + I  
Sbjct: 49  RLQVELRKKLLSRQKEIMNQNGIVTSPEEATKRKIAQT---GLWQSRLAPFLGVLAAIFI 105

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V          N    ++  G+         +    +P  SP+  K+             
Sbjct: 106 VMSLTCLWRYANGQYHLEVTGSPQEITRFWTEDAPLQPAVSPDGTKILVVRGGS------ 159

Query: 240 YLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKDEAMDIYSV----------- 287
            ++ +        +         +P +S NG++      +    +I  +           
Sbjct: 160 LVLLSHTGVQLAYLEPPEGATFQSPTWSPNGEQISFVFSQQGKEEIRQLAAEKIITATKM 219

Query: 288 ---------------------DLQSNATERL----TNTLFINISA-SYSPDSSQIVFESD 321
                                 LQ+ A ++L     N   I+ S   YSPD +++ +   
Sbjct: 220 SNVYSQTTARGAEKKGQEAKDSLQTFAGKKLKAADLNHKSIHFSNLVYSPDGNRLAYVMG 279

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDG 380
           R G+     ++ +  ++KRI+         P WSP G  +   +    K + + ++  + 
Sbjct: 280 RIGEPTEVWVRYSNGEEKRITNGD-----APTWSPNGKYLVVQRPGKSKTYDLWLVNVET 334

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSR 408
               LL      + PTWS +G  L F+ 
Sbjct: 335 GGADLL---GPGENPTWSKNG-YLAFNT 358



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 76/215 (35%), Gaps = 37/215 (17%)

Query: 242 MDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALIS-------VQKDEAMDIYSVDLQSN 292
               +  +P+ I  F +    L P  S +G + L+        +        Y    +  
Sbjct: 120 YHLEVTGSPQEITRFWTEDAPLQPAVSPDGTKILVVRGGSLVLLSHTGVQLAYLEPPEGA 179

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             +          S ++SP+  QI F   ++GKE++  + +    +K I+  K ++ +  
Sbjct: 180 TFQ----------SPTWSPNGEQISFVFSQQGKEEIRQLAA----EKIITATKMSNVYSQ 225

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRK 409
             + +G      +  G++    +    G + +   L  +  +     +SP G  L +   
Sbjct: 226 T-TARG-----AEKKGQEAKDSLQTFAGKKLKAADLNHKSIHFSNLVYSPDGNRLAYVMG 279

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           + G+          NG  + + N  A    P W  
Sbjct: 280 RIGEPTEVWVRYS-NGEEKRITNGDA----PTWSP 309


>gi|300867485|ref|ZP_07112136.1| WD-40 repeat protein [Oscillatoria sp. PCC 6506]
 gi|300334479|emb|CBN57304.1| WD-40 repeat protein [Oscillatoria sp. PCC 6506]
          Length = 1235

 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 61/403 (15%), Positives = 128/403 (31%), Gaps = 55/403 (13%)

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD------WNSLGAQVLVTG 114
               ++ +++  L  +  F    + +  ++      I            ++     L+  
Sbjct: 526 FAVSIALLIASSLGVTSYFQ-YHRAAISEREARISEIKALASSSEGLFASNRRLDALIEA 584

Query: 115 -----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
                ++ K GK    ++ ++ +V      + +  + +    R   H  +          
Sbjct: 585 IKAKRKLQKLGKADTNIQHQVINV------LRQAVYENDEYNRLSGHKAAAMAVDISPDS 638

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           K   +S +              ++ +   DG  I  L      I+   +FSP+ + +A  
Sbjct: 639 KFIASSSV------------DKTIKIWRSDGTEIATL-KGHKAIVRAVKFSPDGKFIAST 685

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D      V L   R     K I    + +    FS  G+    S   D  + ++  D 
Sbjct: 686 SDDG----TVKLWH-RNGTLIKTIQTNNTGLWGVAFSPEGQTVA-SASMDNTVKLWKRDG 739

Query: 290 QSNA---TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---SQ 343
                     L        S  +SPD   I       G + + + + +G+    +   + 
Sbjct: 740 AGTGVLPLRTLKGHTGGVSSVVFSPDGQLIA---SGGGDQTVKLWKRDGAGTGALPLRTF 796

Query: 344 DKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSG 401
               +      +SP G LIA          + + K DG+  +      + + +  +SP G
Sbjct: 797 RGHTTVISAVAFSPDGQLIA---SGSGDQTVKLWKLDGTLLQTFRGHTAVISSIAFSPDG 853

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           + +  + +   D   KL++ID      T     A      W  
Sbjct: 854 QIIASASR---DKTVKLWNIDGT-ELTTFRGHSAGIWGIAWSP 892



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/275 (18%), Positives = 95/275 (34%), Gaps = 17/275 (6%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D K I       +   WR     I+             F+    F++ +   G +K    
Sbjct: 637 DSKFIASSSVDKTIKIWRSDGTEIATLKGHKAIVRAVKFSPDGKFIASTSDDGTVK---- 692

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +  R+G  I+ +  +    L+   FSP  Q VA A+ D+   L             + + 
Sbjct: 693 LWHRNGTLIKTIQTNNTG-LWGVAFSPEGQTVASASMDNTVKLWKRDGAGTGVLPLRTLK 751

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSP 311
                + +  FS +G+    S   D+ + ++  D        L           + ++SP
Sbjct: 752 GHTGGVSSVVFSPDGQLIA-SGGGDQTVKLWKRDGAGTGALPLRTFRGHTTVISAVAFSP 810

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I   S   G + + + + +G+   +  +   A      +SP G +IA         
Sbjct: 811 DGQLIASGS---GDQTVKLWKLDGT-LLQTFRGHTAVISSIAFSPDGQIIASASRDKT-- 864

Query: 372 AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
            + +   DG++        + +    WSP GR + 
Sbjct: 865 -VKLWNIDGTELTTFRGHSAGIWGIAWSPDGRFIA 898



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 91/237 (38%), Gaps = 20/237 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S    N++ + DR+G+ +          +F   FSP+ Q +A  + D  + L+++  D  
Sbjct: 981  SARNDNTVNIWDRNGS-LVTTLAGHGATVFSIAFSPDGQTIASGSQD--NTLKLWRRDGT 1037

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +    +      + I    FS +GK    S   D  + ++ +D      + L        
Sbjct: 1038 LLHTLRE---HHAPIWQVVFSPDGKLIA-SAGGDGTVKLWRLD--GTLYKTLKGHTSSVW 1091

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              ++SPDS  +   S   G   + +   +G    R  +   A+ +   +SP G  IA   
Sbjct: 1092 RLAFSPDSKMLASGS---GDNTVKLWTVDG-QLLRTLEGHTAAVWGVAFSPDGKTIASGS 1147

Query: 366  FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   + + K DG++   L    + ++   +S  G+   F      D    L+++
Sbjct: 1148 VDNT---LKLWKVDGTELTTLRGHSAAIRGVAYSGDGK---FVASVSEDNTLILWNV 1198



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/262 (19%), Positives = 96/262 (36%), Gaps = 33/262 (12%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ +   DG  ++        ++    FSP+ Q +A A+ D      V L +  
Sbjct: 817  SGSGDQTVKLWKLDGTLLQT-FRGHTAVISSIAFSPDGQIIASASRDK----TVKLWNID 871

Query: 246  IDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTL 301
                   +  FR     I    +S +G+    +     A +   +    N  +R +T   
Sbjct: 872  GTE----LTTFRGHSAGIWGIAWSPDGRFIASA----GAENAVRLWQSQNPLKRTITAHK 923

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                + + S D++ I      +G  +L+   S      R  +   A+ +    S  G LI
Sbjct: 924  AGIWAIALSADNNIIA-TGSEDGTTKLW---SREGKLLRTLRGDTAAIYAVALSRDGQLI 979

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A  +       + +  ++GS    L    + + +  +SP G+++    +   D   KL+ 
Sbjct: 980  ASARNDNT---VNIWDRNGSLVTTLAGHGATVFSIAFSPDGQTIASGSQ---DNTLKLWR 1033

Query: 421  IDLNGRNETLINTPAYASDPQW 442
             D      TL++T      P W
Sbjct: 1034 RDG-----TLLHTLREHHAPIW 1050



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 70/193 (36%), Gaps = 25/193 (12%)

Query: 135  DRKQIIGKKFFSSPASWRK---IAHTI---SDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            D + I      ++   WR+   + HT+      I+Q +    G        ++ +   G 
Sbjct: 1016 DGQTIASGSQDNTLKLWRRDGTLLHTLREHHAPIWQVVFSPDGK------LIASAGGDGT 1069

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +K    +   DG  +          ++   FSP+ + +A  + D  + ++++ +D    +
Sbjct: 1070 VK----LWRLDGT-LYKTLKGHTSSVWRLAFSPDSKMLASGSGD--NTVKLWTVD---GQ 1119

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              + +    + +    FS +GK    S   D  + ++ VD        L          +
Sbjct: 1120 LLRTLEGHTAAVWGVAFSPDGKTIA-SGSVDNTLKLWKVD--GTELTTLRGHSAAIRGVA 1176

Query: 309  YSPDSSQIVFESD 321
            YS D   +   S+
Sbjct: 1177 YSGDGKFVASVSE 1189


>gi|319788383|ref|YP_004147858.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Pseudoxanthomonas suwonensis 11-1]
 gi|317466895|gb|ADV28627.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 800

 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 80/211 (37%), Gaps = 18/211 (8%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-----RLTNTL 301
              P ++G       A R+S +G+   + ++  +  D +   +  +        RLT+  
Sbjct: 334 GNRPLQVG-GEGAGAAIRWSDDGRNVAVMLRAIDNKDRWIASVDLDQARLQPRHRLTDPA 392

Query: 302 FINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +IN + +   + PD+  + F S+  G   LY    NG  ++R S         PV +  G
Sbjct: 393 WINWNFNEFGWLPDNQTLWFVSEESGYAHLYTQSGNGRPRQRTS--GRWEASAPVPTADG 450

Query: 359 DLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             + F   +     + +  +     Q R +     ++    SP GR L+  R        
Sbjct: 451 RGLLFLCNRAWPGDYEVCALDLGSDQVREVTALDGVEDFVLSPDGRQLL-VRYSGSWLPP 509

Query: 417 KLYSIDLNGRNETLIN---TPAYASDPQWVG 444
           +L    L+G    ++    +PA+ +   W  
Sbjct: 510 QLAVAPLDGGEARVLTDTRSPAFKAR-AWTA 539



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 71/204 (34%), Gaps = 17/204 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPK-RIGNFRSMI 260
           R L    +      R+S + + VA      D++D     +   +    P+ R+ +   + 
Sbjct: 336 RPLQVGGEGAGAAIRWSDDGRNVAVMLRAIDNKDRWIASVDLDQARLQPRHRLTDPAWIN 395

Query: 261 LAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                  +  + +      ++     +Y+         + T+  +   +   + D   ++
Sbjct: 396 WNFNEFGWLPDNQTLWFVSEESGYAHLYTQSGNGR-PRQRTSGRWEASAPVPTADGRGLL 454

Query: 318 FESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AI 373
           F  +R   G  ++  +       + ++       F  V SP G  +   ++SG      +
Sbjct: 455 FLCNRAWPGDYEVCALDLGSDQVREVTALDGVEDF--VLSPDGRQLL-VRYSGSWLPPQL 511

Query: 374 GVMKKDGSQERLLVEDSNLQAPTW 397
            V   DG + R+L +     +P +
Sbjct: 512 AVAPLDGGEARVLTDTR---SPAF 532



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 72/196 (36%), Gaps = 13/196 (6%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN--IRYLTPSRDQILFEPR---FSPN 222
             +   + R + V    +    +  +  +D D A    R+       I +      + P+
Sbjct: 348 AIRWSDDGRNVAVMLRAIDNKDRW-IASVDLDQARLQPRHRLTDPAWINWNFNEFGWLPD 406

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DE 280
            Q + + + +       +L     +  P++  + R    AP  +++G+  L    +    
Sbjct: 407 NQTLWFVSEESG---YAHLYTQSGNGRPRQRTSGRWEASAPVPTADGRGLLFLCNRAWPG 463

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQK 339
             ++ ++DL S+    +T    +      SPD  Q++          QL V   +G + +
Sbjct: 464 DYEVCALDLGSDQVREVTALDGVEDF-VLSPDGRQLLVRYSGSWLPPQLAVAPLDGGEAR 522

Query: 340 RISQDKEASYFDPVWS 355
            ++  +  ++    W+
Sbjct: 523 VLTDTRSPAFKARAWT 538



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 44/133 (33%), Gaps = 12/133 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRALI 274
            +S + ++       +   +R          A +R+ +     L    P +    +R   
Sbjct: 54  WWSWDGREAQLLLKREGSPVRDTWRQPVAGGALQRVPDAERAALDAPDPAYDPQRRRMAF 113

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               D    ++  DL S    +LT T        ++ D   +     R G +  +  +++
Sbjct: 114 VRNGD----VFVRDLASGRLVQLTRTAQAESQVRFAADGGVLW----RAGNDWFH-WRAD 164

Query: 335 GSDQKRISQDKEA 347
           G+  +  S   E 
Sbjct: 165 GTTAQVASPRAER 177


>gi|226357015|ref|YP_002786755.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Deinococcus
           deserti VCD115]
 gi|226319005|gb|ACO47001.1| putative dipeptidyl aminopeptidase/acylaminoacyl-peptidase
           [Deinococcus deserti VCD115]
          Length = 669

 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 73/199 (36%), Gaps = 35/199 (17%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQ--------------SNATERLTNTLFINISAS 308
           P+ S +G R    + + E  D++  +                    +  T     + +  
Sbjct: 26  PQISPDGTRVAFVLSRVEEEDVHKPEADWARPRYKSQIWLSSGEQAQAFTQGEARDAAPR 85

Query: 309 YSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +SPD + + F  D  G K QL+++  NG + +R++ D      D  WSP G  I+F    
Sbjct: 86  WSPDGATLAFVRDSNGRKGQLHLLPLNGGEARRVT-DFRQPVQDVQWSPDGRFISFLSTG 144

Query: 368 GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            ++      + +  + R++           W P             +  ++L+  D+   
Sbjct: 145 DDEDK----RDERGEARVITRPRYRFNGRDWLP-------------ERAARLWLYDVAQD 187

Query: 427 NETLINTPA-YASDPQWVG 444
           + T  + PA   +   W+ 
Sbjct: 188 DLTEWHAPAVEITSVAWLP 206



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 72/241 (29%), Gaps = 34/241 (14%)

Query: 216 EPRFSPNQQKVAYATYDDE------------DILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +P+ SP+  +VA+     E                   +        +      +   AP
Sbjct: 25  DPQISPDGTRVAFVLSRVEEEDVHKPEADWARPRYKSQIWLSSGEQAQAFTQGEARDAAP 84

Query: 264 RFSSNGKRALISVQKDEA-MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           R+S +G         +     ++ + L      R+T+         +SPD   I F S  
Sbjct: 85  RWSPDGATLAFVRDSNGRKGQLHLLPLNGGEARRVTDFRQPVQDVQWSPDGRFISFLSTG 144

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           + +++      +   + R+       +    W P+               + +       
Sbjct: 145 DDEDK-----RDERGEARVITRPRYRFNGRDWLPE-----------RAARLWLYDVAQDD 188

Query: 383 ERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG----DTGSKLYSIDLNGRNETLINTPAYA 437
                  +  + +  W P    ++F    D        S++Y + L+G    + +  A  
Sbjct: 189 LTEWHAPAVEITSVAWLPGSDGVLFVSSVDEFSATQWQSEVYRLPLSGEAAQITHWNASI 248

Query: 438 S 438
           S
Sbjct: 249 S 249



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 101/303 (33%), Gaps = 64/303 (21%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +    +    G   +  T   +     PR+SP+   +A+    +    +++L+     
Sbjct: 56  RPRYKSQIWLSSGEQAQAFTQG-EARDAAPRWSPDGATLAFVRDSNGRKGQLHLLPLN-G 113

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--------------------------- 280
              +R+ +FR  +   ++S +G+        D+                           
Sbjct: 114 GEARRVTDFRQPVQDVQWSPDGRFISFLSTGDDEDKRDERGEARVITRPRYRFNGRDWLP 173

Query: 281 --AMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDRE------GKEQLYVM 331
             A  ++  D+  +      +   +   S ++ P S  ++F S  +       + ++Y +
Sbjct: 174 ERAARLWLYDVAQDDLTEW-HAPAVEITSVAWLPGSDGVLFVSSVDEFSATQWQSEVYRL 232

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERL- 385
             +G +  +I+    AS    +  P G+  A       +       + ++  +G   RL 
Sbjct: 233 PLSG-EAAQITH-WNASISTVIPHPDGERFALVGRPEGQGNTQHAHLYLLHPNGEFTRLD 290

Query: 386 ---------LVE-----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
                    LV       +    P W     +++FS    G  G  L++  L G+ +   
Sbjct: 291 EGHDHPVGNLVGGDCHVGALPDRPVWL-DASTILFSSTVRGSCG--LFTATLGGQVQAHT 347

Query: 432 NTP 434
           + P
Sbjct: 348 HDP 350



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 17/111 (15%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--------------GSQERLLVED-SNLQA 394
            DP  SP G  +AF     E+  +   + D              G Q +   +  +   A
Sbjct: 24  SDPQISPDGTRVAFVLSRVEEEDVHKPEADWARPRYKSQIWLSSGEQAQAFTQGEARDAA 83

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
           P WSP G +L F R  +G  G +L+ + LNG     +        D QW  
Sbjct: 84  PRWSPDGATLAFVRDSNGRKG-QLHLLPLNGGEARRVTDFRQPVQDVQWSP 133


>gi|212634939|ref|YP_002311464.1| transcriptional regulator [Shewanella piezotolerans WP3]
 gi|212556423|gb|ACJ28877.1| Transcriptional regulatory protein [Shewanella piezotolerans WP3]
          Length = 699

 Score = 86.2 bits (212), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 64/168 (38%), Gaps = 9/168 (5%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDL--QSNATERLTNTLFINISA 307
           +RI NF  +      S +G+      +++ +   IY  DL  +S    +++ +     S 
Sbjct: 169 ERITNFEGVEEQAAISPDGRFMAFQWRRELKKAQIYIKDLTDKSAPLRQVSMSEDKETSP 228

Query: 308 SYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLIAFT 364
           ++SPD   + + S +  G+ +L+V +   +  + I              WSP G  +A+ 
Sbjct: 229 TWSPDGQALAYFSFNASGQCELHVRELITNQDRLIDTGCTSSGYVHSLDWSPDGKFLAYA 288

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRK 409
           K      AI       S+   L   +  +     +WS +       R 
Sbjct: 289 KAGEASVAIYAYSFASSEISQLSYPNTGEEDLLVSWSANSDEFAVVRS 336



 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 12/162 (7%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQS-NGSDQKRISQDKEASYF 350
             ER+TN   +   A+ SPD   + F+  RE  K Q+Y+    + S   R     E    
Sbjct: 167 TVERITNFEGVEEQAAISPDGRFMAFQWRRELKKAQIYIKDLTDKSAPLRQVSMSEDKET 226

Query: 351 DPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLI 405
            P WSP G  +A+  F+   +  + V +   +Q+RL+         + +  WSP G+ L 
Sbjct: 227 SPTWSPDGQALAYFSFNASGQCELHVRELITNQDRLIDTGCTSSGYVHSLDWSPDGKFLA 286

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP---QWVG 444
           ++  K G+    +Y+        + ++ P    +     W  
Sbjct: 287 YA--KAGEASVAIYAYSFASSEISQLSYPNTGEEDLLVSWSA 326



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 78/220 (35%), Gaps = 7/220 (3%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFS 266
            + + +  +   SP+ + +A+    +    ++Y+ D     AP +++        +P +S
Sbjct: 172 TNFEGVEEQAAISPDGRFMAFQWRRELKKAQIYIKDLTDKSAPLRQVSMSEDKETSPTWS 231

Query: 267 SNGKRAL-ISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQIVFESDR 322
            +G+     S       +++  +L +N    +           S  +SPD   + +    
Sbjct: 232 PDGQALAYFSFNASGQCELHVRELITNQDRLIDTGCTSSGYVHSLDWSPDGKFLAYAKAG 291

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           E    +Y      S+  ++S            WS   D  A  +      +I V+ +   
Sbjct: 292 EASVAIYAYSFASSEISQLSYPNTGEEDLLVSWSANSDEFAVVRSVAMDASIIVLSRSND 351

Query: 382 QERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               +VE   +  +  W      L F+  +DG    + YS
Sbjct: 352 SVVKVVESETMVISLEWEHDANMLYFNALRDGAFVIEQYS 391



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 46/336 (13%), Positives = 106/336 (31%), Gaps = 59/336 (17%)

Query: 163 YQSITGEKGDFNSRIL-----FVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFE 216
            + IT  +G      +     F++      + K  + + D  D +         +     
Sbjct: 168 VERITNFEGVEEQAAISPDGRFMAFQWRRELKKAQIYIKDLTDKSAPLRQVSMSEDKETS 227

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALI 274
           P +SP+ Q +AY +++      +++ +   ++             + +  +S +GK    
Sbjct: 228 PTWSPDGQALAYFSFNASGQCELHVRELITNQDRLIDTGCTSSGYVHSLDWSPDGKFLAY 287

Query: 275 SVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFE-SDREGKEQLYVM 331
           +   + ++ IY+    S+   +L+  NT   ++  S+S +S +     S       + + 
Sbjct: 288 AKAGEASVAIYAYSFASSEISQLSYPNTGEEDLLVSWSANSDEFAVVRSVAMDASIIVLS 347

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-------------------- 371
           +SN S  K +  + E       W    +++ F       F                    
Sbjct: 348 RSNDSVVKVV--ESETMVISLEWEHDANMLYFNALRDGAFVIEQYSFESQSITDFHRDDT 405

Query: 372 ----------------------AIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSR 408
                                  I V      Q +  L   S      +  S + ++F  
Sbjct: 406 ISSLAINEKNNRLYYSRHLSQEHITVHSLTNGQVKHRLASSSRDMFGQFIASSQEVLFLS 465

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            + G  G +L+ ++ +  ++ L         P    
Sbjct: 466 NRSG--GWELW-VNQDAGSKQLTQQMGIVGIPAASP 498



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 89/229 (38%), Gaps = 15/229 (6%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
                   +F  + Q+V + +         + +    D   K++     ++  P  S  G
Sbjct: 445 SSSRDMFGQFIASSQEVLFLSNRSGG----WELWVNQDAGSKQLTQQMGIVGIPAASPIG 500

Query: 270 KRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            + ++ ++  +A    +Y  D+ + +  ++        + S+S + S+I + S+ EG   
Sbjct: 501 SQYVLPIKAKDADSYSLYLGDVATESLAKIRGIKGDVRNPSFSNNGSKIYYSSNLEGHWG 560

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLL 386
           +Y    N    +R+                   + +T+    +  I     DGS+  ++ 
Sbjct: 561 VYAYDLN---SQRVEFM-FGQAAKYAVEDDVGGLYYTR--DNQAGIYYHANDGSEDIQVT 614

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            E S+    ++     +L F ++   DT  ++ +I  +G+  T+ + PA
Sbjct: 615 SELSSSDWGSFFYQNNALYFIKRT--DTNDQVIAITADGQQHTVFSLPA 661



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 91/252 (36%), Gaps = 52/252 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S N  + A       D   + L  +R + +  ++    +M+++  +  +      +  
Sbjct: 323 SWSANSDEFAVVRSVAMDASIIVL--SRSNDSVVKVVESETMVISLEWEHDANMLYFNAL 380

Query: 278 KDEAMDIYSVDLQSNATE----------------------------------RLTNT--- 300
           +D A  I     +S +                                     LTN    
Sbjct: 381 RDGAFVIEQYSFESQSITDFHRDDTISSLAINEKNNRLYYSRHLSQEHITVHSLTNGQVK 440

Query: 301 -----LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                   ++   +   S +++F S+R G  +L+V Q  GS  K+++Q +      P  S
Sbjct: 441 HRLASSSRDMFGQFIASSQEVLFLSNRSGGWELWVNQDAGS--KQLTQ-QMGIVGIPAAS 497

Query: 356 PQGDL--IAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           P G    +       + +++ +      S  ++     +++ P++S +G  + +S   +G
Sbjct: 498 PIGSQYVLPIKAKDADSYSLYLGDVATESLAKIRGIKGDVRNPSFSNNGSKIYYSSNLEG 557

Query: 413 DTGSKLYSIDLN 424
             G  +Y+ DLN
Sbjct: 558 HWG--VYAYDLN 567


>gi|75911228|ref|YP_325524.1| pentapeptide repeat-containing protein [Anabaena variabilis ATCC
           29413]
 gi|75704953|gb|ABA24629.1| Pentapeptide repeat protein [Anabaena variabilis ATCC 29413]
          Length = 1190

 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 86/243 (35%), Gaps = 17/243 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E+V  G     + +       +          ++   FSP+  K+A           + L
Sbjct: 575 ETVAVGDSTGLIYLWQITTTKLLATFEGHTSWVWSVAFSPDGHKLA----SSGSDTSIRL 630

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D +  +  + +      + +  FS +G+R   S   D+ + ++  +LQ +  + L    
Sbjct: 631 WDVQSGQCLRVLTEHTGCVWSVNFSPDGQRLA-SGSDDQTVRVW--NLQGDCLQVLKGHT 687

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S  +SPD   +   S     E + +      +   + Q          +SP G L+
Sbjct: 688 KNVYSVHFSPDHQTLASGSK---DESIRIWNVIDGNCLNVLQGHTEGVHCVRYSPDGQLL 744

Query: 362 AFTKFSGEKFAIGVMKKDGS--QERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKL 418
           A   F G    +   +   +  Q ++L   +N   +  +SP G  L        D   +L
Sbjct: 745 ASGSF-GGSIRLWSGQLHTNAYQSKVLHGHTNWVWSMAFSPDGGILASGSD---DGTLRL 800

Query: 419 YSI 421
           +++
Sbjct: 801 WNV 803



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 67/462 (14%), Positives = 154/462 (33%), Gaps = 91/462 (19%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDS 96
           ++    A+   V++A   F +              DL +S +F+     +    I+    
Sbjct: 530 ELVVQQADLRQVNLAGVNFQN-------------ADLTKS-IFSESLNSAMSIDISPDGE 575

Query: 97  IPRFQD-------WNSLGAQVLVT--GRVI------------KEGKDRLRVEFRLWDVKD 135
                D       W     ++L T  G               K          RLWDV+ 
Sbjct: 576 TVAVGDSTGLIYLWQITTTKLLATFEGHTSWVWSVAFSPDGHKLASSGSDTSIRLWDVQS 635

Query: 136 RKQIIGKKFFS--------SPASWRKIAHTISDDIYQSITGEKGD------FNSRILFVS 181
            + +      +        SP   R  +   SDD    +   +GD       +++ ++  
Sbjct: 636 GQCLRVLTEHTGCVWSVNFSPDGQRLASG--SDDQTVRVWNLQGDCLQVLKGHTKNVYSV 693

Query: 182 E------SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                  ++ SG    S+ + +    N   +     + +   R+SP+ Q +A  ++    
Sbjct: 694 HFSPDHQTLASGSKDESIRIWNVIDGNCLNVLQGHTEGVHCVRYSPDGQLLASGSF--GG 751

Query: 236 ILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            +R++      +    K +    + + +  FS +G   L S   D  + ++  ++Q    
Sbjct: 752 SIRLWSGQLHTNAYQSKVLHGHTNWVWSMAFSPDGG-ILASGSDDGTLRLW--NVQDGQC 808

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             + +    ++ A  +     +V  S     + + +   +G   K +             
Sbjct: 809 INVLSGHTDDVLA-IAIRGQLMVSASQ---DQTVRLWNLHGQSLKTLRGCTSG-IRSLSL 863

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDG----------SQERLLVEDSNLQAP----TWSPS 400
           SP G  +A ++   E   +  ++ DG          + +R+    + L +     ++SP 
Sbjct: 864 SPNGKTLA-SRGQDETIHLWHLQFDGDLSSPLRPDKTWQRVTDTTAGLTSWTSYLSFSPD 922

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +++        D    ++++    + E+L     + + P W
Sbjct: 923 SQTVA---TNGQDGSILIWNL----QTESLSQWSGHDA-PVW 956



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 107/283 (37%), Gaps = 31/283 (10%)

Query: 160  DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG----ANIRYLTPSRDQILF 215
            D  +Q +T       S   ++S S  S     ++    +DG     N++  + S+     
Sbjct: 897  DKTWQRVTDTTAGLTSWTSYLSFSPDS----QTVATNGQDGSILIWNLQTESLSQWSGHD 952

Query: 216  EPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             P +    +P+ + +A  ++D      V L D +  +  + +   +  + A  F ++G+R
Sbjct: 953  APVWTVMFNPSGKTLASGSHDQ----TVRLWDVQTHQCLQVLRGHQDGVRAIAFGTDGQR 1008

Query: 272  ALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
               S   D+ + ++ V  Q+ A    L        + +++    Q++  S     + + +
Sbjct: 1009 LA-SGSSDQTIRLWEV--QTGACLGVLQGHSGGVFTLAFTAHDQQLISGSF---DQTIRL 1062

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVE- 388
                  +  +I +      +    SP G  +A          + +         ++L E 
Sbjct: 1063 WDLQTRESIQILRGHTGGIWTIAISPDGKTLA---SGSGDQTVRLWNLQTGHCLQVLHEH 1119

Query: 389  DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             S + + ++S +G+ L+       D   K++ I      +TLI
Sbjct: 1120 RSWVTSVSFSSNGQFLLSGSD---DRTIKVWDIGTGRCIKTLI 1159



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 65/195 (33%), Gaps = 26/195 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRK--QIIGKKFFSSPA-----SWRKIAHTISDDIYQSI--- 166
                        RLWDV+  +  Q++        A       +++A   SD   +     
Sbjct: 965  KTLASGSHDQTVRLWDVQTHQCLQVLRGHQDGVRAIAFGTDGQRLASGSSDQTIRLWEVQ 1024

Query: 167  ---------TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                         G F        + ++SG    ++ + D        +       ++  
Sbjct: 1025 TGACLGVLQGHSGGVFTLAFTAHDQQLISGSFDQTIRLWDLQTRESIQILRGHTGGIWTI 1084

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              SP+ + +A  + D      V L + +     + +   RS + +  FSSNG+  L S  
Sbjct: 1085 AISPDGKTLASGSGDQ----TVRLWNLQTGHCLQVLHEHRSWVTSVSFSSNGQFLL-SGS 1139

Query: 278  KDEAMDIYSVDLQSN 292
             D  + ++  D+ + 
Sbjct: 1140 DDRTIKVW--DIGTG 1152


>gi|227819903|ref|YP_002823874.1| WD-repeart protein, beta transducin-like protein [Sinorhizobium
            fredii NGR234]
 gi|227338902|gb|ACP23121.1| WD-repeart protein, beta transducin-like protein [Sinorhizobium
            fredii NGR234]
          Length = 1536

 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 59/312 (18%), Positives = 105/312 (33%), Gaps = 28/312 (8%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWDV    ++      +S       +H       + I     D  +R+         G+
Sbjct: 1012 RLWDVPSGSEVATFGDHASDTQGTTFSHD-----GRLIATVSLDGTARLWDGVSGKERGV 1066

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +      + RD A +      ++       FSP+ + +A A+  +     V L D   D 
Sbjct: 1067 LGRETAGLKRDQAGVPGPEIDKEMNC---AFSPDDKLLATASLGN----LVRLWDVESDS 1119

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                I   R ++    FS +G R L +   DE   ++ +D                  A+
Sbjct: 1120 EFAVIAGHRGLVEHVAFSPDGTRLL-TASHDETARLWDID---GVLTTSMRHRRPPTFAA 1175

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPD ++++      G +   +       +    +       D  +SP G L+A     G
Sbjct: 1176 FSPDGTRVI---TGGGDDTANIWDVASGREVVRLEPNSGFIGDATFSPDGHLVATASSYG 1232

Query: 369  EKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                I +       E L +           +SP G  LI S   DG   ++L++    G 
Sbjct: 1233 ---RIVLWDAKSGHEALRLNSGKAAVVNLQFSP-GSDLIASASDDG--AARLWNTS-TGV 1285

Query: 427  NETLINTPAYAS 438
               ++ T     
Sbjct: 1286 QIAVLTTGGNLR 1297



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 97/263 (36%), Gaps = 17/263 (6%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             V++G   ++  + D                + +  FSP+   VA A+       R+ L 
Sbjct: 1182 RVITGGGDDTANIWDVASGREVVRLEPNSGFIGDATFSPDGHLVATAS----SYGRIVLW 1237

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            D +      R+ + ++ ++  +FS  G   + S   D A  ++  +  +     +  T  
Sbjct: 1238 DAKSGHEALRLNSGKAAVVNLQFSP-GSDLIASASDDGAARLW--NTSTGVQIAVLTTGG 1294

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                  +SPD  ++V  + ++   +L+        + R+    E       +SP G L+A
Sbjct: 1295 NLRKVLFSPDG-ELVLTALKDYTARLWKRD---GTEVRVLAGHEKRITAAAFSPNGRLVA 1350

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +   G    +  ++       +      L    +SP  +S++ + +   D  ++++ + 
Sbjct: 1351 TSSLDGTA-RVWSIEDGSVVATMRRPGEALTDVAFSPDSKSVVTASR---DGSARIWDV- 1405

Query: 423  LNGRNE-TLINTPAYASDPQWVG 444
             +G  +  L     +  +  +  
Sbjct: 1406 ADGAEQAALRGHKGFVREATFSP 1428



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 116/338 (34%), Gaps = 49/338 (14%)

Query: 97   IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
             P F  ++  G + ++TG     G D   +    WDV   ++++                
Sbjct: 1170 PPTFAAFSPDGTR-VITGG----GDDTANI----WDVASGREVV---------------- 1204

Query: 157  TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRDQILF 215
                     +    G            +V+       + + D    +      S    + 
Sbjct: 1205 --------RLEPNSGFIGDATFSPDGHLVATASSYGRIVLWDAKSGHEALRLNSGKAAVV 1256

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              +FSP    +A A+ D        L +T        +      +    FS +G   +++
Sbjct: 1257 NLQFSPGSDLIASASDDG----AARLWNTSTGVQIAVLTTG-GNLRKVLFSPDG-ELVLT 1310

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              KD    ++  D        L        +A++SP+  ++V  S  +G  +++ ++ +G
Sbjct: 1311 ALKDYTARLWKRD--GTEVRVLAGHEKRITAAAFSPNG-RLVATSSLDGTARVWSIE-DG 1366

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            S    + +  EA   D  +SP    +      G    I  +     Q  L      ++  
Sbjct: 1367 SVVATMRRPGEA-LTDVAFSPDSKSVVTASRDGSA-RIWDVADGAEQAALRGHKGFVREA 1424

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            T+SPSG  ++ +  +DG    +L+S   +GR   ++  
Sbjct: 1425 TFSPSGLYVVTASPQDGTV--RLWSAS-SGREIAILTG 1459



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 79/224 (35%), Gaps = 17/224 (7%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             + +      D  + +  FSP   ++  ++YD        + +         +      +
Sbjct: 807  QHRQTAVFRHDDGVTDAAFSPTGDRIVTSSYDK----TTRIWNVEDSFQIAILKGHEGPV 862

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                FS +G R   +  +D    I+  D  S     L        +A ++   ++++  S
Sbjct: 863  ERASFSPDGSRVA-TAGRDGTARIW--DAASGGQLYLLPQPGNVNTAMFNAAGTRLLTGS 919

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-D 379
            D      ++    +    K+++  +       ++SP G  ++F    GE+  + +    D
Sbjct: 920  DMR-APAVW----DTQTGKKVAAAEGDWTTSAMFSPDG--LSFAAGYGEERLVRIWSAED 972

Query: 380  GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG--SKLYSI 421
            G   R +   S      +SP G  L+ +  +        +L+ +
Sbjct: 973  GRPIREIYNRSWPDEVIFSPDGSKLVANAWRTLTWNAVPRLWDV 1016



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 12/196 (6%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L    +      +      +    FS  G R + +   D+   I++V+  S     L   
Sbjct: 801 LYQALLQHRQTAVFRHDDGVTDAAFSPTGDRIV-TSSYDKTTRIWNVE-DSFQIAILKGH 858

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 AS+SPD S++   + R+G  +++   +    Q  +   +  +    +++  G  
Sbjct: 859 EGPVERASFSPDGSRVA-TAGRDGTARIW--DAASGGQLYLLP-QPGNVNTAMFNAAGTR 914

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +       +  A  V      ++    E     +  +SP G  L F+     +   +++S
Sbjct: 915 LL---TGSDMRAPAVWDTQTGKKVAAAEGDWTTSAMFSPDG--LSFAAGYGEERLVRIWS 969

Query: 421 IDLNGRNETLINTPAY 436
            + +GR    I   ++
Sbjct: 970 AE-DGRPIREIYNRSW 984



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 81/293 (27%), Gaps = 62/293 (21%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYAT-------YDDEDILRVYLMD--------------- 243
            +    +  +    FSP+  +VA A        +D     ++YL+                
Sbjct: 854  ILKGHEGPVERASFSPDGSRVATAGRDGTARIWDAASGGQLYLLPQPGNVNTAMFNAAGT 913

Query: 244  ------------TRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKDEAMDIYSVDLQ 290
                            +  K++            FS +G        ++  + I+S +  
Sbjct: 914  RLLTGSDMRAPAVWDTQTGKKVAAAEGDWTTSAMFSPDGLSFAAGYGEERLVRIWSAE-D 972

Query: 291  SNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEAS 348
                  + N  + +    +SPD S++V  + R         +       +     D  + 
Sbjct: 973  GRPIREIYNRSWPD-EVIFSPDGSKLVANAWRTLTWNAVPRLWDVPSGSEVATFGDHASD 1031

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---------LLVEDSNLQAP---- 395
                 +S  G LIA     G      +      +ER         L  + + +  P    
Sbjct: 1032 TQGTTFSHDGRLIATVSLDGTA---RLWDGVSGKERGVLGRETAGLKRDQAGVPGPEIDK 1088

Query: 396  ----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                 +SP  + L  +         +L+ ++ +     +           +  
Sbjct: 1089 EMNCAFSPDDKLLATASL---GNLVRLWDVESDSEFAVIAGHRGLVEHVAFSP 1138



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 199  DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            DG+ +  +     + L +  FSP+ + V  A+ D        + D         +   + 
Sbjct: 1365 DGSVVATM-RRPGEALTDVAFSPDSKSVVTASRDG----SARIWDVADGAEQAALRGHKG 1419

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +    FS +G   + +  +D  + ++S          LT    +    +  P S+  VF
Sbjct: 1420 FVREATFSPSGLYVVTASPQDGTVRLWSAS-SGREIAILT---GLETVGNVEPASTLAVF 1475

Query: 319  ESD 321
             S+
Sbjct: 1476 NSE 1478


>gi|36958731|gb|AAQ87199.1| Vegetatible incompatibility protein HET-E-1 [Sinorhizobium fredii
            NGR234]
          Length = 1538

 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 59/312 (18%), Positives = 105/312 (33%), Gaps = 28/312 (8%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWDV    ++      +S       +H       + I     D  +R+         G+
Sbjct: 1014 RLWDVPSGSEVATFGDHASDTQGTTFSHD-----GRLIATVSLDGTARLWDGVSGKERGV 1068

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +      + RD A +      ++       FSP+ + +A A+  +     V L D   D 
Sbjct: 1069 LGRETAGLKRDQAGVPGPEIDKEMNC---AFSPDDKLLATASLGN----LVRLWDVESDS 1121

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                I   R ++    FS +G R L +   DE   ++ +D                  A+
Sbjct: 1122 EFAVIAGHRGLVEHVAFSPDGTRLL-TASHDETARLWDID---GVLTTSMRHRRPPTFAA 1177

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPD ++++      G +   +       +    +       D  +SP G L+A     G
Sbjct: 1178 FSPDGTRVI---TGGGDDTANIWDVASGREVVRLEPNSGFIGDATFSPDGHLVATASSYG 1234

Query: 369  EKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                I +       E L +           +SP G  LI S   DG   ++L++    G 
Sbjct: 1235 ---RIVLWDAKSGHEALRLNSGKAAVVNLQFSP-GSDLIASASDDG--AARLWNTS-TGV 1287

Query: 427  NETLINTPAYAS 438
               ++ T     
Sbjct: 1288 QIAVLTTGGNLR 1299



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 97/263 (36%), Gaps = 17/263 (6%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             V++G   ++  + D                + +  FSP+   VA A+       R+ L 
Sbjct: 1184 RVITGGGDDTANIWDVASGREVVRLEPNSGFIGDATFSPDGHLVATAS----SYGRIVLW 1239

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            D +      R+ + ++ ++  +FS  G   + S   D A  ++  +  +     +  T  
Sbjct: 1240 DAKSGHEALRLNSGKAAVVNLQFSP-GSDLIASASDDGAARLW--NTSTGVQIAVLTTGG 1296

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                  +SPD  ++V  + ++   +L+        + R+    E       +SP G L+A
Sbjct: 1297 NLRKVLFSPDG-ELVLTALKDYTARLWKRD---GTEVRVLAGHEKRITAAAFSPNGRLVA 1352

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +   G    +  ++       +      L    +SP  +S++ + +   D  ++++ + 
Sbjct: 1353 TSSLDGTA-RVWSIEDGSVVATMRRPGEALTDVAFSPDSKSVVTASR---DGSARIWDV- 1407

Query: 423  LNGRNE-TLINTPAYASDPQWVG 444
             +G  +  L     +  +  +  
Sbjct: 1408 ADGAEQAALRGHKGFVREATFSP 1430



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 57/338 (16%), Positives = 116/338 (34%), Gaps = 49/338 (14%)

Query: 97   IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
             P F  ++  G + ++TG     G D   +    WDV   ++++                
Sbjct: 1172 PPTFAAFSPDGTR-VITGG----GDDTANI----WDVASGREVV---------------- 1206

Query: 157  TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRDQILF 215
                     +    G            +V+       + + D    +      S    + 
Sbjct: 1207 --------RLEPNSGFIGDATFSPDGHLVATASSYGRIVLWDAKSGHEALRLNSGKAAVV 1258

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              +FSP    +A A+ D        L +T        +      +    FS +G   +++
Sbjct: 1259 NLQFSPGSDLIASASDDG----AARLWNTSTGVQIAVLTTG-GNLRKVLFSPDG-ELVLT 1312

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              KD    ++  D        L        +A++SP+  ++V  S  +G  +++ ++ +G
Sbjct: 1313 ALKDYTARLWKRD--GTEVRVLAGHEKRITAAAFSPNG-RLVATSSLDGTARVWSIE-DG 1368

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            S    + +  EA   D  +SP    +      G    I  +     Q  L      ++  
Sbjct: 1369 SVVATMRRPGEA-LTDVAFSPDSKSVVTASRDGSA-RIWDVADGAEQAALRGHKGFVREA 1426

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            T+SPSG  ++ +  +DG    +L+S   +GR   ++  
Sbjct: 1427 TFSPSGLYVVTASPQDGTV--RLWSAS-SGREIAILTG 1461



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 79/224 (35%), Gaps = 17/224 (7%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             + +      D  + +  FSP   ++  ++YD        + +         +      +
Sbjct: 809  QHRQTAVFRHDDGVTDAAFSPTGDRIVTSSYDK----TTRIWNVEDSFQIAILKGHEGPV 864

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                FS +G R   +  +D    I+  D  S     L        +A ++   ++++  S
Sbjct: 865  ERASFSPDGSRVA-TAGRDGTARIW--DAASGGQLYLLPQPGNVNTAMFNAAGTRLLTGS 921

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-D 379
            D      ++    +    K+++  +       ++SP G  ++F    GE+  + +    D
Sbjct: 922  DMR-APAVW----DTQTGKKVAAAEGDWTTSAMFSPDG--LSFAAGYGEERLVRIWSAED 974

Query: 380  GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG--SKLYSI 421
            G   R +   S      +SP G  L+ +  +        +L+ +
Sbjct: 975  GRPIREIYNRSWPDEVIFSPDGSKLVANAWRTLTWNAVPRLWDV 1018



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 12/196 (6%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L    +      +      +    FS  G R + +   D+   I++V+  S     L   
Sbjct: 803 LYQALLQHRQTAVFRHDDGVTDAAFSPTGDRIV-TSSYDKTTRIWNVE-DSFQIAILKGH 860

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 AS+SPD S++   + R+G  +++   +    Q  +   +  +    +++  G  
Sbjct: 861 EGPVERASFSPDGSRVA-TAGRDGTARIW--DAASGGQLYLLP-QPGNVNTAMFNAAGTR 916

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +       +  A  V      ++    E     +  +SP G  L F+     +   +++S
Sbjct: 917 LL---TGSDMRAPAVWDTQTGKKVAAAEGDWTTSAMFSPDG--LSFAAGYGEERLVRIWS 971

Query: 421 IDLNGRNETLINTPAY 436
            + +GR    I   ++
Sbjct: 972 AE-DGRPIREIYNRSW 986



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 81/293 (27%), Gaps = 62/293 (21%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYAT-------YDDEDILRVYLMD--------------- 243
            +    +  +    FSP+  +VA A        +D     ++YL+                
Sbjct: 856  ILKGHEGPVERASFSPDGSRVATAGRDGTARIWDAASGGQLYLLPQPGNVNTAMFNAAGT 915

Query: 244  ------------TRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKDEAMDIYSVDLQ 290
                            +  K++            FS +G        ++  + I+S +  
Sbjct: 916  RLLTGSDMRAPAVWDTQTGKKVAAAEGDWTTSAMFSPDGLSFAAGYGEERLVRIWSAE-D 974

Query: 291  SNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEAS 348
                  + N  + +    +SPD S++V  + R         +       +     D  + 
Sbjct: 975  GRPIREIYNRSWPD-EVIFSPDGSKLVANAWRTLTWNAVPRLWDVPSGSEVATFGDHASD 1033

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---------LLVEDSNLQAP---- 395
                 +S  G LIA     G      +      +ER         L  + + +  P    
Sbjct: 1034 TQGTTFSHDGRLIATVSLDGTA---RLWDGVSGKERGVLGRETAGLKRDQAGVPGPEIDK 1090

Query: 396  ----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                 +SP  + L  +         +L+ ++ +     +           +  
Sbjct: 1091 EMNCAFSPDDKLLATASL---GNLVRLWDVESDSEFAVIAGHRGLVEHVAFSP 1140



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 199  DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            DG+ +  +     + L +  FSP+ + V  A+ D        + D         +   + 
Sbjct: 1367 DGSVVATM-RRPGEALTDVAFSPDSKSVVTASRDG----SARIWDVADGAEQAALRGHKG 1421

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +    FS +G   + +  +D  + ++S          LT    +    +  P S+  VF
Sbjct: 1422 FVREATFSPSGLYVVTASPQDGTVRLWSAS-SGREIAILT---GLETVGNVEPASTLAVF 1477

Query: 319  ESD 321
             S+
Sbjct: 1478 NSE 1480


>gi|145545345|ref|XP_001458357.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426176|emb|CAK90960.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1166

 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 58/319 (18%), Positives = 109/319 (34%), Gaps = 48/319 (15%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             RLWDVK   Q   K  F+                       KG  +         +VSG
Sbjct: 785  IRLWDVKLGHQ---KTQFNG--------------------HRKGVTSVCFSSDGTRLVSG 821

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               NS+   D      +       + +    FSP+   +A  + D      + L D +  
Sbjct: 822  SQDNSIRFWDIKSGRQKSQLDGHKKEITSVCFSPDDTTLASGSSDK----TILLWDVKTG 877

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINIS 306
            +   ++      +++  FS NG            + I   D++    +  L        S
Sbjct: 878  QQQFQLNGHTRTVMSVCFSPNGTLLA---SGSGDITIILWDVKKGVKKSSLNGHSHYVAS 934

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              +S D + +   S   G + + +        K + +   +  F   +SP G ++A    
Sbjct: 935  VCFSFDGTLLASGS---GDKTILLWDVKTGQPKSLFKGHTSGVFSVCFSPDGSMLASGSQ 991

Query: 367  SGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  I +      Q+  +L V    + +  +SP GR+L    +   D   +L+ + + 
Sbjct: 992  DNS---IRLWDIKTGQQKSQLDVHCDYVTSICFSPDGRTLASGSQ---DNSIRLWDVKI- 1044

Query: 425  GRNETLINTPAYASDPQWV 443
            G+ ++L+N  +      WV
Sbjct: 1045 GKQKSLLNGHS-----SWV 1058



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 62/327 (18%), Positives = 114/327 (34%), Gaps = 48/327 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G  +  G D   +  RLWDVK  +Q             R   H  S+ +        G  
Sbjct: 316 GTTLASGSDDHSI--RLWDVKTGQQ-----------KARLDGH--SNGVRSVCFSPDG-- 358

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    ++ SG   +S+ + D      +         ++   FSP+   +A      
Sbjct: 359 --------TTLASGSYDHSIRLWDVKTGQQKAKLDGHSSYVYSVCFSPDGTTLA-----S 405

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              + + L D +  +   ++    + IL+  FS  G     S   DE++ ++  D+++  
Sbjct: 406 GSEVTIRLWDVKTGQQKAKLDGHLNGILSVCFSPEGSTLA-SGSNDESICLW--DVKTGQ 462

Query: 294 TERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            +++T    I   +S  +SPD + +   S     + +         QK            
Sbjct: 463 -QKVTLDGHIGKILSVCFSPDGTALASGSS---DKCIRFWDIKAIQQKIELNGHSNGILS 518

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRK 409
             +SP G  +A     G   +I +      Q+  RL    S +++  +SP G  L     
Sbjct: 519 VCFSPDGSTLA---SGGYNKSICLWDVKTGQQKSRLDGHTSCVRSVCFSPDGTILASGSD 575

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAY 436
              D+  +L++I   G   T I     
Sbjct: 576 ---DSSIRLWNIK-TGFQTTKIEDSGN 598



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 74/218 (33%), Gaps = 17/218 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             + +                  +    FSP+   +A  + D      + L D +  +  
Sbjct: 284 KFIYIWYLKTGKQMQKLIGHTHYVCSVCFSPDGTTLASGSDDH----SIRLWDVKTGQQK 339

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASY 309
            R+    + + +  FS +G     S   D ++ ++  D+++   + +L        S  +
Sbjct: 340 ARLDGHSNGVRSVCFSPDGTTLA-SGSYDHSIRLW--DVKTGQQKAKLDGHSSYVYSVCF 396

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD + +   S+      + +       QK              +SP+G  +A       
Sbjct: 397 SPDGTTLASGSEVT----IRLWDVKTGQQKAKLDGHLNGILSVCFSPEGSTLASGSNDES 452

Query: 370 KFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
              I +      Q+++ ++     + +  +SP G +L 
Sbjct: 453 ---ICLWDVKTGQQKVTLDGHIGKILSVCFSPDGTALA 487



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/309 (17%), Positives = 101/309 (32%), Gaps = 33/309 (10%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQ---IIGKKFFS----------SPASWRKIAHTISDDIY 163
                       RLWDVK  +Q   + G   +           + AS  ++   + D   
Sbjct: 359 TTLASGSYDHSIRLWDVKTGQQKAKLDGHSSYVYSVCFSPDGTTLASGSEVTIRLWDVKT 418

Query: 164 QSITGEKGDFNSRILFV-----SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
                +     + IL V       ++ SG    S+C+ D      +         +    
Sbjct: 419 GQQKAKLDGHLNGILSVCFSPEGSTLASGSNDESICLWDVKTGQQKVTLDGHIGKILSVC 478

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+   +A  + D      +   D +  +    +    + IL+  FS +G         
Sbjct: 479 FSPDGTALASGSSDK----CIRFWDIKAIQQKIELNGHSNGILSVCFSPDGSTLA---SG 531

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                I   D+++   + RL        S  +SPD + +   SD      + +       
Sbjct: 532 GYNKSICLWDVKTGQQKSRLDGHTSCVRSVCFSPDGTILASGSD---DSSIRLWNIKTGF 588

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           Q    +D     F   +SP G ++A        ++I + +     E+  +    L +   
Sbjct: 589 QTTKIEDSGNIIFSVCFSPDGIMLAALC----SYSICLWEIKTRIEKSRIWGYKLSSICM 644

Query: 398 SPSGRSLIF 406
           SP G +L +
Sbjct: 645 SPDGTTLAY 653



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 86/291 (29%), Gaps = 39/291 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                         LWDVK  +Q            ++   HT    +        G     
Sbjct: 858  TTLASGSSDKTILLWDVKTGQQ-----------QFQLNGHTR--TVMSVCFSPNGTLL-- 902

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                     SG    ++ + D      +         +    FS +   +A  + D    
Sbjct: 903  --------ASGSGDITIILWDVKKGVKKSSLNGHSHYVASVCFSFDGTLLASGSGDK--- 951

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
              + L D +  +         S + +  FS +G     S  +D ++ ++  D+++   + 
Sbjct: 952  -TILLWDVKTGQPKSLFKGHTSGVFSVCFSPDGSMLA-SGSQDNSIRLW--DIKTGQQKS 1007

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            +L        S  +SPD   +   S       + +       QK +     +      +S
Sbjct: 1008 QLDVHCDYVTSICFSPDGRTLASGSQ---DNSIRLWDVKIGKQKSLLNGHSSWVQSVCFS 1064

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            P G  +A          +  +K +  + ++        +   S  G +L F
Sbjct: 1065 PDGTTLASGSQDNS-IRLWNVKIENQKSQI----CQHYSVGISSDGSTLAF 1110



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 82/259 (31%), Gaps = 24/259 (9%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ SG    S+C+ D      +         +    FSP+   +A  + D      + L 
Sbjct: 527 TLASGGYNKSICLWDVKTGQQKSRLDGHTSCVRSVCFSPDGTILASGSDDS----SIRLW 582

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +      +I +  ++I +  FS +G              I   ++++   +       
Sbjct: 583 NIKTGFQTTKIEDSGNIIFSVCFSPDGIMLAALCS----YSICLWEIKTRIEKSRIWGYK 638

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +  S   SPD + + +  D      +          K              +SP G  +A
Sbjct: 639 L-SSICMSPDGTTLAYGLDNS----ICFFSMKTRQNKSKLNGHVQDITSLCFSPDGTKLA 693

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                     I +      Q++  +    S +++  +SP G+ L       G     +Y 
Sbjct: 694 SGSKDNS---IYLWDVKTGQQKATLFGHRSCIESICFSPDGKKLA-----SGSKEKLIYL 745

Query: 421 IDLNGRNETLINTPAYASD 439
            D+    +       + SD
Sbjct: 746 WDV-KTGKQWATLNGHISD 763



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/357 (14%), Positives = 103/357 (28%), Gaps = 77/357 (21%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
             K           LWDVK  +Q                 H     I        G     
Sbjct: 690  TKLASGSKDNSIYLWDVKTGQQKATL-----------FGHRSC--IESICFSPDG----- 731

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 + + SG  +  + + D                +    FSP+   +A  + D+   
Sbjct: 732  -----KKLASGSKEKLIYLWDVKTGKQWATLNGHISDITSICFSPDCTTLASGSRDN--- 783

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              + L D ++     +    R  + +  FSS+G R + S  +D ++  + +        +
Sbjct: 784  -CIRLWDVKLGHQKTQFNGHRKGVTSVCFSSDGTRLV-SGSQDNSIRFWDI-KSGRQKSQ 840

Query: 297  LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            L        S  +SPD + +   S     + + +       Q+        +     +SP
Sbjct: 841  LDGHKKEITSVCFSPDDTTLASGSS---DKTILLWDVKTGQQQFQLNGHTRTVMSVCFSP 897

Query: 357  QGDLIAF------------------TKFSGEKFAIG---------------------VMK 377
             G L+A                   +  +G    +                      +  
Sbjct: 898  NGTLLASGSGDITIILWDVKKGVKKSSLNGHSHYVASVCFSFDGTLLASGSGDKTILLWD 957

Query: 378  KDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                Q + L     S + +  +SP G  L    +   D   +L+ I   G+ ++ ++
Sbjct: 958  VKTGQPKSLFKGHTSGVFSVCFSPDGSMLASGSQ---DNSIRLWDIK-TGQQKSQLD 1010



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 82/231 (35%), Gaps = 20/231 (8%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N         + +    FSP+  ++A  + D+     + L D R  R    I   ++ + 
Sbjct: 213 NELKQFNDHVETVNSICFSPDGNQLASGSDDE----FIRLRDVRSGRLNS-IFQGKTKVK 267

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +  FS NG   +++    + + I+ +       ++L        S  +SPD + +   SD
Sbjct: 268 SVCFSPNGT--ILTSCCLKFIYIWYL-KTGKQMQKLIGHTHYVCSVCFSPDGTTLASGSD 324

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 + +       QK              +SP G  +A   +     +I +      
Sbjct: 325 ---DHSIRLWDVKTGQQKARLDGHSNGVRSVCFSPDGTTLASGSYD---HSIRLWDVKTG 378

Query: 382 QERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           Q++  ++   S + +  +SP G +L        +   +L+ +    +   L
Sbjct: 379 QQKAKLDGHSSYVYSVCFSPDGTTLA----SGSEVTIRLWDVKTGQQKAKL 425



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 87/263 (33%), Gaps = 22/263 (8%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +    + ++  + NS+C         +       Q +    FSP+  K+A  + D+    
Sbjct: 644 MSPDGTTLAYGLDNSICFFSMKTRQNKSKLNGHVQDITSLCFSPDGTKLASGSKDN---- 699

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-R 296
            +YL D +  +    +   RS I +  FS +GK+        +   IY  D+++      
Sbjct: 700 SIYLWDVKTGQQKATLFGHRSCIESICFSPDGKKLA---SGSKEKLIYLWDVKTGKQWAT 756

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L   +    S  +SPD + +   S       + +       QK              +S 
Sbjct: 757 LNGHISDITSICFSPDCTTLASGSR---DNCIRLWDVKLGHQKTQFNGHRKGVTSVCFSS 813

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +              +K    + +L      + +  +SP   +L        D   
Sbjct: 814 DGTRLVSGSQDNS-IRFWDIKSGRQKSQLDGHKKEITSVCFSPDDTTLA---SGSSDKTI 869

Query: 417 KLYSID-------LNGRNETLIN 432
            L+ +        LNG   T+++
Sbjct: 870 LLWDVKTGQQQFQLNGHTRTVMS 892



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 35/205 (17%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++  G     +   LWDVK  +          P S     HT             G F
Sbjct: 941  GTLLASGSGDKTI--LLWDVKTGQ----------PKSL-FKGHT------------SGVF 975

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +         + SG   NS+ + D      +         +    FSP+ + +A  + D+
Sbjct: 976  SVCFSPDGSMLASGSQDNSIRLWDIKTGQQKSQLDVHCDYVTSICFSPDGRTLASGSQDN 1035

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + L D +I +    +    S + +  FS +G     S  +D ++ +++V ++ N 
Sbjct: 1036 ----SIRLWDVKIGKQKSLLNGHSSWVQSVCFSPDGTTLA-SGSQDNSIRLWNVKIE-NQ 1089

Query: 294  TERLTNTLFINISASYSPDSSQIVF 318
              ++     +      S D S + F
Sbjct: 1090 KSQICQHYSVG----ISSDGSTLAF 1110



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 11/153 (7%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +L+ N  ++  + +    S  +SPD +Q+   SD    E + +          I    + 
Sbjct: 209 NLRINELKQFNDHVETVNSICFSPDGNQLASGSD---DEFIRLRDVRSGRLNSI-FQGKT 264

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIF 406
                 +SP G ++        KF      K G Q + L+     + +  +SP G +L  
Sbjct: 265 KVKSVCFSPNGTILTSCCL---KFIYIWYLKTGKQMQKLIGHTHYVCSVCFSPDGTTLAS 321

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                 D   +L+ +    +   L         
Sbjct: 322 GSD---DHSIRLWDVKTGQQKARLDGHSNGVRS 351


>gi|298373126|ref|ZP_06983116.1| prolyl oligopeptidase family protein [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298276030|gb|EFI17581.1| prolyl oligopeptidase family protein [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 704

 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 90/306 (29%), Gaps = 63/306 (20%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPK 251
           +  DG  +          L + + S + +K+ Y     + +     R   +        K
Sbjct: 39  IKVDGGLMTPEVLWAFGRLSDAKVSADGKKIVYGVSYYSVEQNKSNRELFVVNTDGSDNK 98

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +I        A ++  N  R      +  +  I+ ++   +   ++T+         YSP
Sbjct: 99  QITRTAKSENAAKWVKNDSRIAFLSSESGSSQIWEMNPDGSDRTQITDREGGINDFIYSP 158

Query: 312 DSSQIVFESDREGK---------------------------------EQLYVMQSNG--- 335
           D+ +I+F +D +                                      +V   +G   
Sbjct: 159 DNKKILFVADVKYGERTSDIYPDLPQATGMIIDDLMYKHWDEWVQSVPHPFVADFDGKAI 218

Query: 336 SDQKRISQD--------KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK---------K 378
           S++K + Q                  WSP    IA+T          V            
Sbjct: 219 SNEKDLLQGEPYESPMKPFGGAEQLAWSPDSKYIAYTCRKKTGIEYAVSTNSDIFLYDVA 278

Query: 379 DGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGS---KLYSIDLNGRNETLINT 433
            G   + + E        P +S  G+SL F   ++    S   +L  IDL   N+    T
Sbjct: 279 QGKTVQNISEGMPGYDINPQFSHDGKSLAFLSMQNDGCESDKNRLVIIDLT-NNQRADYT 337

Query: 434 PAYASD 439
             +   
Sbjct: 338 DGWDQS 343



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/337 (14%), Positives = 108/337 (32%), Gaps = 74/337 (21%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--- 230
           +SRI F+S    S    + +  M+ DG++   +T     I     +SP+ +K+ +     
Sbjct: 116 DSRIAFLSSESGS----SQIWEMNPDGSDRTQITDREGGINDFI-YSPDNKKILFVADVK 170

Query: 231 -----------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILA----------- 262
                               +D++  +  +         + +F    ++           
Sbjct: 171 YGERTSDIYPDLPQATGMIIDDLMYKHWDEWVQSVPHPFVADFDGKAISNEKDLLQGEPY 230

Query: 263 -----P-------RFSSNGKRALISVQK--------DEAMDIYSVDL-QSNATERLTNT- 300
                P        +S + K    + +K            DI+  D+ Q    + ++   
Sbjct: 231 ESPMKPFGGAEQLAWSPDSKYIAYTCRKKTGIEYAVSTNSDIFLYDVAQGKTVQNISEGM 290

Query: 301 LFINISASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
              +I+  +S D   + F S         K +L ++    + +   +   + S    VW 
Sbjct: 291 PGYDINPQFSHDGKSLAFLSMQNDGCESDKNRLVIIDLTNNQRADYTDGWDQSVESFVWD 350

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                I        +  I        +   + +  +      + +G  LI +R       
Sbjct: 351 RDDKNIFLISVWHGETQIYRADLKEKKISRITDGQHDYE-AVALAGDRLIGTRHSM-QMP 408

Query: 416 SKLYSID-LNGRNETLINTPAYASD--------PQWV 443
           +++YSID ++G+   +     +  D        P+W+
Sbjct: 409 NEIYSIDPVSGKQTQITFENKHILDQLKIADVKPRWI 445


>gi|212635429|ref|YP_002311954.1| peptidase [Shewanella piezotolerans WP3]
 gi|212556913|gb|ACJ29367.1| Peptidase [Shewanella piezotolerans WP3]
          Length = 710

 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 90/296 (30%), Gaps = 73/296 (24%)

Query: 220 SPNQQKVAY----ATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALI 274
           S +  KV Y       D +    +Y+ D   + A  K+I  F     +  F  N K    
Sbjct: 71  SHDGTKVVYAVKNVDADGKASSDLYIQDLNSNAATAKQITQFSGTEHSVAFGPNDKSIYF 130

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----------------- 317
              +D +  +Y + L      ++T+          S D +Q V                 
Sbjct: 131 LAARDGSSQLYQLALDGGEARQVTDFPLDVEGFKLSNDGTQAVVNMRVFPECKDLNCSKE 190

Query: 318 -FE-----------------------SDREGKEQLYVMQSNGSDQKR---ISQDKEASYF 350
            FE                       SD   +  L+V + NG        ++   +    
Sbjct: 191 KFEQEAARSSTGREYKQLMVRHWDTWSDHS-RSHLFVAKLNGEKVTTAVDVTAGLDTETP 249

Query: 351 DPVWS--------PQGDLIAFTKFSG-------EKFAIGVMKKDGSQERLLVEDSNLQ-- 393
              +S        P G  + ++  +          + +  +  DG + + L E +     
Sbjct: 250 PKPFSGMEEVTFTPDGKHVVYSAKAPAKDQAWITNYDLWKVSVDGGEAKNLTESNKAWDA 309

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSI----DLNGRNETLINTPAYASDPQWVGF 445
            PT+S  GR L +         +  Y I     + G+ + +   P +   P  + F
Sbjct: 310 HPTYSADGRYLAYLAMSKPGFEADRYRIMLRDTVTGQEKEV--APMWDRSPHSLAF 363



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 87/268 (32%), Gaps = 41/268 (15%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +    +G     L V   D                   +S + +   +    + + +   
Sbjct: 196 AARSSTGREYKQLMVRHWD------------------TWSDHSRSHLFVAKLNGEKVTTA 237

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-------EAMDIYSVDLQSNA 293
           +  T           F  M     F+ +GK  + S +            D++ V +    
Sbjct: 238 VDVTAGLDTETPPKPFSGME-EVTFTPDGKHVVYSAKAPAKDQAWITNYDLWKVSVDGGE 296

Query: 294 TERLT-NTLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQD 344
            + LT +    +   +YS D   +         FE+DR    ++ +  +    +K ++  
Sbjct: 297 AKNLTESNKAWDAHPTYSADGRYLAYLAMSKPGFEADR---YRIMLRDTVTGQEKEVAPM 353

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S     +      +  T     + +I  +       + +  + +      +     +
Sbjct: 354 WDRSPHSLAFGKDNKTLYVTAQDIGQVSIFEVNTQFGDVKTIYNEGSNSVVGINAD--KI 411

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +FS+K   + G  LYSI+L+G+N   + 
Sbjct: 412 VFSKKSLVEPG-DLYSINLDGQNLNRLT 438



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 95/314 (30%), Gaps = 82/314 (26%)

Query: 175 SRILFVSESV-VSGIIKNSLCVMD--RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           +++++  ++V   G   + L + D   + A  + +T           F PN + + +   
Sbjct: 75  TKVVYAVKNVDADGKASSDLYIQDLNSNAATAKQITQFSGTEHSV-AFGPNDKSIYFLA- 132

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----------------- 274
              D               +++ +F   +   + S++G +A++                 
Sbjct: 133 -ARDGSSQLYQLALDGGEARQVTDFPLDVEGFKLSNDGTQAVVNMRVFPECKDLNCSKEK 191

Query: 275 -----------------------SVQKDEAMDIYSVDLQSNATER---LTNTLFINISA- 307
                                  +        ++   L          +T  L       
Sbjct: 192 FEQEAARSSTGREYKQLMVRHWDTWSDHSRSHLFVAKLNGEKVTTAVDVTAGLDTETPPK 251

Query: 308 --------SYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQKRISQDKEASYFDP 352
                   +++PD   +V+ +    K+Q ++   +       G + K +++  +A    P
Sbjct: 252 PFSGMEEVTFTPDGKHVVYSAKAPAKDQAWITNYDLWKVSVDGGEAKNLTESNKAWDAHP 311

Query: 353 VWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERLLVEDSNLQAPTW--SPSGRSLIFS 407
            +S  G  +A+   S   F      +M +D      +       AP W  SP   SL F 
Sbjct: 312 TYSADGRYLAYLAMSKPGFEADRYRIMLRDT-----VTGQEKEVAPMWDRSP--HSLAF- 363

Query: 408 RKKDGDTGSKLYSI 421
               G     LY  
Sbjct: 364 ----GKDNKTLYVT 373


>gi|67904770|ref|XP_682641.1| hypothetical protein AN9372.2 [Aspergillus nidulans FGSC A4]
 gi|40747283|gb|EAA66439.1| hypothetical protein AN9372.2 [Aspergillus nidulans FGSC A4]
 gi|259488214|tpe|CBF87491.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 625

 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 82/216 (37%), Gaps = 38/216 (17%)

Query: 265 FSSNGKRALISVQKDEAMD------IYSVDLQ-SNATERLTNTLFINISASYSPDSSQIV 317
            S +G + + ++++    +      ++  D+   ++  ++T+ LF +    +SPD   I 
Sbjct: 24  VSPDGSKVVYALERFSEKNRRSLSSLWIADVGIDHSARQITSGLFRDEKPRWSPDGRFIA 83

Query: 318 FESDREGKEQLYVMQSNGS--DQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGE----- 369
           F SDR G+  +  M   G   +   +++ K+A    D  WS  G  IAF    G      
Sbjct: 84  FLSDRGGETGVIYMLGIGGFEEAYPLTEGKDARRVQDFEWSVDGRYIAFLSREGGDDEKE 143

Query: 370 ----------------KFAIGVMKKDGSQERLLV-EDSNLQAPTW--SPSGRSLIFSRKK 410
                              + ++  +  + R+L   D N+   +W  SP+   L ++   
Sbjct: 144 VDADEPLVFGEDEENSNQRLRIVDVERRRLRVLTPADQNVALFSWSPSPNTTELAYTVAD 203

Query: 411 DGDTGSKLYSIDL----NGRNETLINTPAYASDPQW 442
                S    IDL     G     I+T +  +   W
Sbjct: 204 PSALHSSSSQIDLVSVETGSRRRFISTNSPITSLVW 239


>gi|168702521|ref|ZP_02734798.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 1135

 Score = 86.2 bits (212), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 81/244 (33%), Gaps = 18/244 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R+           P   P+ + +   + +      V + +    R   +         A
Sbjct: 329 QRFRHGGGSVNRVLPT--PDGKML--VSKNYYGDASVLVWELATGRLLHQFPGHYKENRA 384

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
              S +GK   +     +   I   DL S    R L++++      ++SPD   +     
Sbjct: 385 VALSPDGKTLAL----GQDKVIRFYDLTSGKEVRNLSSSIGGTDGLAFSPDGKVLA---S 437

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G   + +    G   +   Q ++    + V+SP G  +A          +  +   G 
Sbjct: 438 GHGCNTVLLWDLAGGKVQSQLQAEQNQVSNLVFSPDGKTLATGDTIDTLIRLFDV-ATGK 496

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDP 440
           + + +      +   +SP G++L    ++     + L+ +   G+    +++P  Y    
Sbjct: 497 ERQQIRCAVFAREFAFSPDGKTLAVGAQEG---AASLWDV-TTGKPIRELHSPNKYVRSL 552

Query: 441 QWVG 444
            W  
Sbjct: 553 AWSP 556



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 82/239 (34%), Gaps = 35/239 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A    +        L D    +  + + +    + +  +S +GK    +  
Sbjct: 511 AFSPDGKTLAVGAQEGAAS----LWDVTTGKPIRELHSPNKYVRSLAWSPDGKSLA-TGD 565

Query: 278 KDEAMDIYSV----DLQSNATERL-TNTL-FINISASYSPDSSQIVFESDREGKEQLYVM 331
            D+   + +V            ++  N    +  S +++ D   ++          + + 
Sbjct: 566 LDDETQVVAVRLWDPATGKELRQMQMNGAVGMAESLAFTADGKTLICGGSHG---VIRLW 622

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                 +K  +            SP G  +AF+      + +       ++  +     +
Sbjct: 623 DPATGAEKSPT-GLPGPVRHMAVSPDGKTLAFSARDITLWDL------TAEREIGTLPGH 675

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-----WVGF 445
             + T++P G++L       G+  + L   D+ GR   L++      DPQ     WV F
Sbjct: 676 HWSFTFAPDGKTLA-----GGNDMNGLNVWDVTGR--RLLSQ--VKVDPQKENLKWVAF 725



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 88/233 (37%), Gaps = 22/233 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   N++ + D  G  ++    +    +    FSP+ + +A     D     + L D  
Sbjct: 437 SGHGCNTVLLWDLAGGKVQSQLQAEQNQVSNLVFSPDGKTLATGDTID---TLIRLFDVA 493

Query: 246 IDRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
             +  ++I   R  + A    FS +GK   +  Q + A  ++  D+ +    R L +   
Sbjct: 494 TGKERQQI---RCAVFAREFAFSPDGKTLAVGAQ-EGAASLW--DVTTGKPIRELHSPNK 547

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVM----QSNGSDQKRISQDKEASYFDP-VWSPQ 357
              S ++SPD   +    D + + Q+  +     + G + +++  +      +   ++  
Sbjct: 548 YVRSLAWSPDGKSLA-TGDLDDETQVVAVRLWDPATGKELRQMQMNGAVGMAESLAFTAD 606

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
           G  +      G    I +       E+        ++    SP G++L FS +
Sbjct: 607 GKTLI---CGGSHGVIRLWDPATGAEKSPTGLPGPVRHMAVSPDGKTLAFSAR 656



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 65/374 (17%), Positives = 118/374 (31%), Gaps = 74/374 (19%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIA---------HTISDDIYQSITGEKGD------ 172
            RLWD     +   K     P   R +A          +  D     +T E+        
Sbjct: 619 IRLWDPATGAE---KSPTGLPGPVRHMAVSPDGKTLAFSARDITLWDLTAEREIGTLPGH 675

Query: 173 -FNSRILFVSESVVSGIIKNSLCVMDRDGAN---IRYLTPSRDQILFEP----RFSPNQQ 224
            ++       +++  G   N L V D  G        + P ++ + +       FSP+ +
Sbjct: 676 HWSFTFAPDGKTLAGGNDMNGLNVWDVTGRRLLSQVKVDPQKENLKWVAFDCVAFSPDGK 735

Query: 225 KVAYATYDDE-----------DILRVYLMDTRIDRAPKR---IGNFRSMILAPRFSSNGK 270
            +A A  +                 V L +T   R  +          M  +  FS +G 
Sbjct: 736 VIATAGRELNETAGRELNGSDRYPVVRLWETATGRQIREHCYKDEIYDMPGSVAFSPDGT 795

Query: 271 RALIS---VQKDEAMDIYSVDLQS---------------NATERLTNTLFINISASYSPD 312
             + S   +++D A  +  +D+                   T+R           ++SPD
Sbjct: 796 LLVTSGAVLERDGA--VCVLDMSGAQDQSRLQQMINRSLGKTKRRFIGQIPEPRVAFSPD 853

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +      EG     V +     ++ + +  +       +S  G  +A    +G    
Sbjct: 854 GRLLAMNRSEEGIP---VWEMATGRERCLLRGHDGPTSAVAFSADGRTLA---SAGWDHT 907

Query: 373 IGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY--SIDLNGRNE 428
           I V   + + E  RL      + A  ++P GR LI      G+  + L+   +DL  R  
Sbjct: 908 IRVWNVETATELKRLKGHRGQVNALVFTPDGRRLI----SAGNDSTVLFWDVLDLTRRPR 963

Query: 429 TLINTPAYASDPQW 442
             +       D  W
Sbjct: 964 PALRLGPSEWDALW 977



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 84/254 (33%), Gaps = 22/254 (8%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           S+ V +     + +  P   +       SP+ + +A           +   D    +  +
Sbjct: 360 SVLVWELATGRLLHQFPGHYKENRAVALSPDGKTLA-----LGQDKVIRFYDLTSGKEVR 414

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYS 310
            + +         FS +GK             +   DL     + +L        +  +S
Sbjct: 415 NLSSSIGGTDGLAFSPDGKVLA---SGHGCNTVLLWDLAGGKVQSQLQAEQNQVSNLVFS 471

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +      +   +L+ + + G ++++I     A  F   +SP G  +A     G  
Sbjct: 472 PDGKTLATGDTIDTLIRLFDV-ATGKERQQIRCAVFAREF--AFSPDGKTLAVGAQEGAA 528

Query: 371 FAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL----NG 425
               V    G   R L   +  +++  WSP G+SL      D D  +++ ++ L     G
Sbjct: 529 SLWDV--TTGKPIRELHSPNKYVRSLAWSPDGKSLA---TGDLDDETQVVAVRLWDPATG 583

Query: 426 RNETLINTPAYASD 439
           +    +        
Sbjct: 584 KELRQMQMNGAVGM 597



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 95/297 (31%), Gaps = 50/297 (16%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
            D +    RL+DV   K+             R         ++        D  +  +  
Sbjct: 480 GDTIDTLIRLFDVATGKE---------RQQIRCA-------VFAREFAFSPDGKTLAV-- 521

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRV 239
                 G  + +  + D           S ++ +    +SP+ + +A    DDE  ++ V
Sbjct: 522 ------GAQEGAASLWDVTTGKPIRELHSPNKYVRSLAWSPDGKSLATGDLDDETQVVAV 575

Query: 240 YLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            L D    +  +++       M  +  F+++GK  +        + ++  D  + A +  
Sbjct: 576 RLWDPATGKELRQMQMNGAVGMAESLAFTADGKTLICGGS-HGVIRLW--DPATGAEKSP 632

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T         + SPD   + F S R+    + +        +R        ++   ++P 
Sbjct: 633 TGLPGPVRHMAVSPDGKTLAF-SARD----ITLWDL---TAEREIGTLPGHHWSFTFAPD 684

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSN-------LQAPTWSPSGRSLI 405
           G  +A          + V    G +   ++ V+               +SP G+ + 
Sbjct: 685 GKTLAGGNDMNG---LNVWDVTGRRLLSQVKVDPQKENLKWVAFDCVAFSPDGKVIA 738



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 63/395 (15%), Positives = 131/395 (33%), Gaps = 92/395 (23%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
           ++     +++ +P+   R   W+  G + L TG +     +   V  RLWD    K++  
Sbjct: 533 VTTGKPIRELHSPNKYVRSLAWSPDG-KSLATGDL---DDETQVVAVRLWDPATGKELRQ 588

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
            +   +      +A T                        ++++ G     + + D    
Sbjct: 589 MQMNGAVGMAESLAFTAD---------------------GKTLICGGSHGVIRLWDPATG 627

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             +  T     +      SP+ + +A++  D      + L D   +   + IG       
Sbjct: 628 AEKSPTGLPGPVRHM-AVSPDGKTLAFSARD------ITLWDLTAE---REIGTLPGHHW 677

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-----------ASYS 310
           +  F+ +GK            D+  +++      RL + + ++              ++S
Sbjct: 678 SFTFAPDGKTLA------GGNDMNGLNVWDVTGRRLLSQVKVDPQKENLKWVAFDCVAFS 731

Query: 311 PDSSQIVFE--------------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---V 353
           PD   I                 SDR     + + ++    Q R    K+  Y  P    
Sbjct: 732 PDGKVIATAGRELNETAGRELNGSDR--YPVVRLWETATGRQIREHCYKDEIYDMPGSVA 789

Query: 354 WSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVED--------------SNLQAP--T 396
           +SP G L+  +        A+ V+   G+Q++  ++                 +  P   
Sbjct: 790 FSPDGTLLVTSGAVLERDGAVCVLDMSGAQDQSRLQQMINRSLGKTKRRFIGQIPEPRVA 849

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +SP GR L  +R ++G    ++      GR   L+
Sbjct: 850 FSPDGRLLAMNRSEEGIPVWEM----ATGRERCLL 880



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 81/283 (28%), Gaps = 60/283 (21%)

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
            G DR  V  RLW+    +QI            R+  H   D+IY         F+    
Sbjct: 753 NGSDRYPV-VRLWETATGRQI------------RE--HCYKDEIYD--MPGSVAFSPDGT 795

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
            +  S        ++CV+D  GA                                +D  R
Sbjct: 796 LLVTSGAVLERDGAVCVLDMSGA--------------------------------QDQSR 823

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           +  M  R     KR   F   I  PR  FS +G+   ++  ++    ++ +   +     
Sbjct: 824 LQQMINRSLGKTKR--RFIGQIPEPRVAFSPDGRLLAMNRSEEGIP-VWEM--ATGRERC 878

Query: 297 LTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           L        SA ++S D   +           + V     + + +  +         V++
Sbjct: 879 LLRGHDGPTSAVAFSADGRTLA---SAGWDHTIRVWNVETATELKRLKGHRGQVNALVFT 935

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           P G  +             V+         L    +     W+
Sbjct: 936 PDGRRLISAGNDSTVLFWDVLDLTRRPRPALRLGPSEWDALWA 978


>gi|170092773|ref|XP_001877608.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647467|gb|EDR11711.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1151

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 80/227 (35%), Gaps = 17/227 (7%)

Query: 185 VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VSG    +L + D   G ++       D+ +    FSP+ + +A  ++D      V + D
Sbjct: 764 VSGSNDATLRIWDALTGISVMGPLRGHDREVTSVAFSPDGRYIASGSHD----CTVRVWD 819

Query: 244 TRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
               +     +      +++  FS +G+    S   D+ + +++     +  +  T    
Sbjct: 820 ASTGQCVMDPLKGHDQEVISVAFSPDGRYIA-SGSFDKTVRVWNALTGQSVLDFFTGHNN 878

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLI 361
              S S+SPD     F     G   +    +  G       +  +       +SP G  I
Sbjct: 879 RIYSVSFSPDGR---FIISGSGDRTIRAWDALTGQSIMNPLKGHKYGVMSVAFSPDGRYI 935

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLI 405
                      + V      Q  +      DS++ +  +SP GR ++
Sbjct: 936 VSGSHDKT---VRVWDFHTGQSVMTPLMGHDSHVSSVAFSPDGRYIV 979



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 85/249 (34%), Gaps = 23/249 (9%)

Query: 186  SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            SG    ++ V D   G  +       DQ +    FSP+ + +A  ++D    +RV+   T
Sbjct: 808  SGSHDCTVRVWDASTGQCVMDPLKGHDQEVISVAFSPDGRYIASGSFD--KTVRVWNALT 865

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLF 302
                         + I +  FS +G+     +       I + D  +       L    +
Sbjct: 866  GQSVL-DFFTGHNNRIYSVSFSPDGR---FIISGSGDRTIRAWDALTGQSIMNPLKGHKY 921

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDL 360
              +S ++SPD   IV  S     + + V   +      ++     ++      +SP G  
Sbjct: 922  GVMSVAFSPDGRYIVSGSH---DKTVRVWDFHTGQSV-MTPLMGHDSHVSSVAFSPDGRY 977

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            I              +  D   +      + +Q+  +SP GR +        D   KL+ 
Sbjct: 978  IVSGSHDKTIRLWHALTGDSLGDPFKGHYNRVQSVVFSPDGRHIA---SGSSDNTIKLWD 1034

Query: 421  -----IDLN 424
                 IDLN
Sbjct: 1035 AHEACIDLN 1043



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 74/237 (31%), Gaps = 33/237 (13%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++VSG    ++ V D        +       +    FSP+ + +        + +    
Sbjct: 634 MNIVSGSYDKTIRVWDASSGQSVMVLYRGSDPIQTIAFSPDGKHIL---CGTTNHIIRLW 690

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                      +G+    + +  FS +GK  +         D+  V       + LT+  
Sbjct: 691 NALTSHCMLSPLGDDEGSVDSVAFSPDGKHII-----SGCGDMIKV------WDALTSHT 739

Query: 302 FIN---------ISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFD 351
            I+          S ++SP+   IV  S+      L +  +  G       +  +     
Sbjct: 740 EIDHVRGHDKAIGSVAFSPNGKHIVSGSN---DATLRIWDALTGISVMGPLRGHDREVTS 796

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLI 405
             +SP G  IA          + V      Q     L   D  + +  +SP GR + 
Sbjct: 797 VAFSPDGRYIASGSHDCT---VRVWDASTGQCVMDPLKGHDQEVISVAFSPDGRYIA 850



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 76/227 (33%), Gaps = 20/227 (8%)

Query: 186 SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG    ++ V +   G  I       D  +    FSP+   +   + D      + + +T
Sbjct: 509 SGSFDKTIRVWNALTGQCIMGPVKGHDDWVSSVAFSPDGGHIVSGSGDK----TIRVWNT 564

Query: 245 RIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTL 301
              +     +      + +  +S +G   ++S   D  + I+  +  +       L    
Sbjct: 565 LTGQCVMDPLKGHGGGVNSVAYSPSG-WHIVSGSSDHTVRIW--NAGTGQCVMHPLFGHD 621

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +    +YSPD   IV  S     + + V  ++      +            +SP G  I
Sbjct: 622 DVVNCVAYSPDGMNIVSGSY---DKTIRVWDASSGQSVMVLYRGSDPIQTIAFSPDGKHI 678

Query: 362 AFTKFSGEKFAIGVMKKDGSQERL--LVED-SNLQAPTWSPSGRSLI 405
                      I +     S   L  L +D  ++ +  +SP G+ +I
Sbjct: 679 L---CGTTNHIIRLWNALTSHCMLSPLGDDEGSVDSVAFSPDGKHII 722



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 49/288 (17%), Positives = 99/288 (34%), Gaps = 38/288 (13%)

Query: 112  VTGRVIKEGKDRLRVE------FRLWDVKDRKQIIG------KKFFSSP--ASWRKIA-- 155
              G V      +  V        R+WD      ++G      ++  S       R IA  
Sbjct: 750  AIGSVAFSPNGKHIVSGSNDATLRIWDALTGISVMGPLRGHDREVTSVAFSPDGRYIASG 809

Query: 156  -HTISDDIYQSITGE------KGDFNSRILFVSES-----VVSGIIKNSLCVMDR-DGAN 202
             H  +  ++ + TG+      KG  +  ++ V+ S     + SG    ++ V +   G +
Sbjct: 810  SHDCTVRVWDASTGQCVMDPLKG-HDQEVISVAFSPDGRYIASGSFDKTVRVWNALTGQS 868

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +       +  ++   FSP+ + +   + D    +R +   T         G+    +++
Sbjct: 869  VLDFFTGHNNRIYSVSFSPDGRFIISGSGD--RTIRAWDALTGQSIMNPLKGHKYG-VMS 925

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              FS +G+  + S   D+ + ++      +    L        S ++SPD   IV  S  
Sbjct: 926  VAFSPDGRYIV-SGSHDKTVRVWDFHTGQSVMTPLMGHDSHVSSVAFSPDGRYIVSGSH- 983

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGE 369
               + + +  +   D          +    V +SP G  IA       
Sbjct: 984  --DKTIRLWHALTGDSLGDPFKGHYNRVQSVVFSPDGRHIASGSSDNT 1029



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 81/278 (29%), Gaps = 29/278 (10%)

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDR-D 199
           K         ++  H         +   KG             +VSG  + ++ + D   
Sbjct: 429 KTLTIENGQMKQWPHRC-------LLRIKGSSGPLAYSPDGRHIVSGSDEGAIHIWDAFT 481

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRS 258
           G N+  L    D I     +SP+ + +   ++D      + + +    +     +     
Sbjct: 482 GHNVMKLEGYADHITSI-VYSPDGKHIISGSFDK----TIRVWNALTGQCIMGPVKGHDD 536

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQI 316
            + +  FS +G   +          I   +  +     + L        S +YSP    I
Sbjct: 537 WVSSVAFSPDGGHIV---SGSGDKTIRVWNTLTGQCVMDPLKGHGGGVNSVAYSPSGWHI 593

Query: 317 VFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           V  S       + +  +             +       +SP G  I    +      I V
Sbjct: 594 VSGSS---DHTVRIWNAGTGQCVMHPLFGHDDVVNCVAYSPDGMNIVSGSYDKT---IRV 647

Query: 376 MKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKD 411
                 Q  +++   +   Q   +SP G+ ++      
Sbjct: 648 WDASSGQSVMVLYRGSDPIQTIAFSPDGKHILCGTTNH 685



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 51/178 (28%), Gaps = 33/178 (18%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      R  +        R WD    + I+               H     +      
Sbjct: 882  SVSFSPDGRFIISGSGDRTIRAWDALTGQSIMN----------PLKGHKY--GVMSVAFS 929

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G            +VSG    ++ V D   G ++       D  +    FSP+ + + 
Sbjct: 930  PDG----------RYIVSGSHDKTVRVWDFHTGQSVMTPLMGHDSHVSSVAFSPDGRYIV 979

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
              ++D    L   L    +    K      + + +  FS +G+    S   D  + ++
Sbjct: 980  SGSHDKTIRLWHALTGDSLGDPFK---GHYNRVQSVVFSPDGRHIA-SGSSDNTIKLW 1033


>gi|307149661|ref|YP_003891031.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
 gi|306986790|gb|ADN18666.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 1847

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 56/326 (17%), Positives = 110/326 (33%), Gaps = 38/326 (11%)

Query: 107  GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
             A+ +    +         V F      D K I+     S    W            +++
Sbjct: 1317 NAENISVTSLEGHSSGAYGVNFS----PDGKTIVSVGGDSQIQLW---------SSNETL 1363

Query: 167  TGEKGDFNSRILFVSESVVSG-----IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
              E  D       V+ S              + +   DG     L   R+ +     FSP
Sbjct: 1364 LKESWDGKETEWGVTFSPDGQLIATFGRGKVIKLWKNDGTLYATLKGHREFVNRV-SFSP 1422

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRALISVQKD 279
            N + +   + D    +R++  D  + +  +            +  FS +GK    +    
Sbjct: 1423 NGEMIVSGSDD--KTVRLWKRDGSLIKILEDNSQDEKSDFTKSVSFSPDGKIIATAS--G 1478

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            E + ++  +      + L +      S S+SPD  +I   S     + + +    G+   
Sbjct: 1479 EIVKLW--NQDGILLKTLQDHRNTVFSVSFSPDGKKIATASF---DKTVNIYNFEGTLIA 1533

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWS 398
             + Q  +A  +D  ++P G  IA          + +   DG     L   ++++   ++S
Sbjct: 1534 TL-QGHQAEVYDVKFNPDGKRIATASADDT---VRIWNLDGKLLTTLKGHNNDVYNLSFS 1589

Query: 399  PSGRSLIFSRKKDGDTGSKLYSIDLN 424
            P G++L       GD    L+ +DL+
Sbjct: 1590 PDGKTLA---SAGGDGKIILWDLDLD 1612



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 58/288 (20%), Positives = 104/288 (36%), Gaps = 36/288 (12%)

Query: 161  DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            DI       K      I       ++    NS+ + D DG N+          + +  FS
Sbjct: 1120 DIKIKTETIKSRLYKAIFSPDGKTLATTDGNSVKLWDLDG-NLLKTLEKNVLPIKDISFS 1178

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+ + +A A+    D  +++  D  + ++ K      + + +  FS +G   +I      
Sbjct: 1179 PDGKLIASAS---GDGFKLWKPDGTLVKSIK-----NADLTSISFSPDGSGIVI-GDAQG 1229

Query: 281  AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             + ++S D        +T   F     ++SPDSS+IV      G   L+       +   
Sbjct: 1230 YVKLWSRD--GEWLRTITKENFTVRDVAFSPDSSKIVAT-FNNGLTGLWSTD---GNLID 1283

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVMKKDGSQERLLVEDSNLQAP 395
            + Q  +       +SP G  IA   F           I V   +G         S     
Sbjct: 1284 VLQGHQNIASSVSFSPDGKTIATASFDRTVRLWNAENISVTSLEG-------HSSGAYGV 1336

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             +SP G++++      GD+  +L+S      NETL+       + +W 
Sbjct: 1337 NFSPDGKTIV---SVGGDSQIQLWS-----SNETLLKESWDGKETEWG 1376



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/245 (18%), Positives = 94/245 (38%), Gaps = 37/245 (15%)

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +S+I+    + ++G       +   DG N+  +      I     FSP+ + +A A++D 
Sbjct: 1260 SSKIVATFNNGLTG-------LWSTDG-NLIDVLQGHQNIASSVSFSPDGKTIATASFDR 1311

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L +   + +   +    S      FS +GK  + SV  D  + ++     S+ 
Sbjct: 1312 ----TVRLWNAE-NISVTSLEGHSSGAYGVNFSPDGKTIV-SVGGDSQIQLW-----SSN 1360

Query: 294  TERLT---NTLFINISASYSPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
               L    +        ++SPD   I  F     G+ ++  +  N        +      
Sbjct: 1361 ETLLKESWDGKETEWGVTFSPDGQLIATF-----GRGKVIKLWKNDGTLYATLKGHREFV 1415

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRS 403
                +SP G++I           + + K+DGS  ++L ++S  +      + ++SP G+ 
Sbjct: 1416 NRVSFSPNGEMIVSGSDDKT---VRLWKRDGSLIKILEDNSQDEKSDFTKSVSFSPDGKI 1472

Query: 404  LIFSR 408
            +  + 
Sbjct: 1473 IATAS 1477



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 101/244 (41%), Gaps = 25/244 (10%)

Query: 162  IYQSITGEKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPS----RDQILF 215
            +Y ++ G + +F +R+ F      +VSG    ++ +  RDG+ I+ L  +    +     
Sbjct: 1404 LYATLKGHR-EFVNRVSFSPNGEMIVSGSDDKTVRLWKRDGSLIKILEDNSQDEKSDFTK 1462

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               FSP+ + +A A+    +I++++  D       K + + R+ + +  FS +GK+   +
Sbjct: 1463 SVSFSPDGKIIATAS---GEIVKLWNQD---GILLKTLQDHRNTVFSVSFSPDGKKIA-T 1515

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               D+ ++IY  + +      L           ++PD  +I   S     + + +   +G
Sbjct: 1516 ASFDKTVNIY--NFEGTLIATLQGHQAEVYDVKFNPDGKRIATAS---ADDTVRIWNLDG 1570

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL----LVEDSN 391
                 + +      ++  +SP G  +A +     K  +  +  D  + R+    LV D  
Sbjct: 1571 KLLTTL-KGHNNDVYNLSFSPDGKTLA-SAGGDGKIILWDLDLDLEKIRVKACHLVRDYL 1628

Query: 392  LQAP 395
               P
Sbjct: 1629 KNNP 1632



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 59/278 (21%), Positives = 110/278 (39%), Gaps = 29/278 (10%)

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG--ANIRYLTPSRDQILFEPRFSP 221
            Q  TG +    +  +  SE       + +L +   D    +I+  T +    L++  FSP
Sbjct: 1080 QKTTGLESVERAAEIIKSELQGKPGREVTLRIYRPDTGEQDIKIKTETIKSRLYKAIFSP 1139

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + + +A       D   V L D   +       N   +     FS +GK    S   D  
Sbjct: 1140 DGKTLATT-----DGNSVKLWDLDGNLLKTLEKNVLPIKDI-SFSPDGKLIA-SASGDG- 1191

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
              ++  D      + + N      S S+SPD S IV   D +G  +L+    +G   + I
Sbjct: 1192 FKLWKPD--GTLVKSIKN--ADLTSISFSPDGSGIV-IGDAQGYVKLW--SRDGEWLRTI 1244

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPS 400
            +++   +  D  +SP    I  T  +G     G+   DG+   +L    N+  + ++SP 
Sbjct: 1245 TKENF-TVRDVAFSPDSSKIVATFNNGLT---GLWSTDGNLIDVLQGHQNIASSVSFSPD 1300

Query: 401  GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            G+++  +     D   +L+    N  N ++ +   ++S
Sbjct: 1301 GKTIATAS---FDRTVRLW----NAENISVTSLEGHSS 1331



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 86/243 (35%), Gaps = 39/243 (16%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
               R      +  ++   FSP+ + +A A+ D    ++++  D         +      +
Sbjct: 938  TRERNRLEGHEGPIYNVSFSPDGEMLASASGD--GTVKLWHHD---GTLVTTLKGHEGTV 992

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                FS +G++ + +   D  + ++  DL      + +   +  I         +     
Sbjct: 993  RDVNFSPDGQKIVTTGD-DGTVRLW--DLSGKQLNQWSGEEYTGIGIRL---GDKP---- 1042

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL------------IAFTKFS- 367
            D EGK    ++    S  K   +       D + S  G              I  ++   
Sbjct: 1043 DTEGKNTFTLIILEVSKNKPAQKAGLQKD-DLILSINGQKTTGLESVERAAEIIKSELQG 1101

Query: 368  --GEKFAIGVMKKDGSQE--RLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              G +  + + + D  ++  ++  E   S L    +SP G++L      DG++  KL+ +
Sbjct: 1102 KPGREVTLRIYRPDTGEQDIKIKTETIKSRLYKAIFSPDGKTLA---TTDGNSV-KLWDL 1157

Query: 422  DLN 424
            D N
Sbjct: 1158 DGN 1160



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 6/97 (6%)

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                R   R+      I    FS +G+    S   D  + ++           L      
Sbjct: 935  VNSTRERNRLEGHEGPIYNVSFSPDGEMLA-SASGDGTVKLW--HHDGTLVTTLKGHEGT 991

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
                ++SPD  +IV   D +G  +L+    +G    +
Sbjct: 992  VRDVNFSPDGQKIVTTGD-DGTVRLW--DLSGKQLNQ 1025



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 7/96 (7%)

Query: 290  QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
             +    RL        + S+SPD   +   S   G   + +   +G+    + +  E + 
Sbjct: 937  STRERNRLEGHEGPIYNVSFSPDGEMLASAS---GDGTVKLWHHDGTLVTTL-KGHEGTV 992

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             D  +SP G  I  T   G    + +    G Q   
Sbjct: 993  RDVNFSPDGQKIVTTGDDGT---VRLWDLSGKQLNQ 1025



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 42/95 (44%), Gaps = 9/95 (9%)

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSN 391
             N + ++   +  E   ++  +SP G+++A     G    + +   DG+    L   +  
Sbjct: 935  VNSTRERNRLEGHEGPIYNVSFSPDGEMLASASGDGT---VKLWHHDGTLVTTLKGHEGT 991

Query: 392  LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            ++   +SP G+ ++       D   +L+  DL+G+
Sbjct: 992  VRDVNFSPDGQKIV---TTGDDGTVRLW--DLSGK 1021


>gi|18312342|ref|NP_559009.1| acylamino-acid-releasing enzyme, conjectural [Pyrobaculum
           aerophilum str. IM2]
 gi|18159791|gb|AAL63191.1| acylamino-acid-releasing enzyme, conjectural [Pyrobaculum
           aerophilum str. IM2]
          Length = 627

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/325 (16%), Positives = 113/325 (34%), Gaps = 61/325 (18%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +         ++ F    +     +    +   +G   + + P         R SP+  K
Sbjct: 13  LVSNPDAAGGKVFFTVTRISLENDRYESSIWACEGEVCKPVLPG--PFDTAARASPDGSK 70

Query: 226 VAYATYDD--EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--- 280
           +A+ +     +    V L        P+++  F   +L   +S  G+   +   +     
Sbjct: 71  IAFLSRRGFGDKDKGVGLWVAEWGGEPRQLAKFLG-VLDFSWSPGGEALAVVAYEGSPEG 129

Query: 281 ---------------------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                                +  +Y VD  S   E++T+     + A+++PD  +I + 
Sbjct: 130 DVKHVERLPLWINDFGFAYNVSSHLYLVDSYSGVVEKITDGDVRVLKAAWAPDGRRIAYA 189

Query: 320 SDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----KFSGEK 370
             R+      + + V+     + +  +    +S  D  WSP G  IAFT     +     
Sbjct: 190 VARDLLKPYLQDVVVLDLKTGE-QMTAASGFSSVSDIAWSPDGRHIAFTGHLRPRGLSSH 248

Query: 371 FAIGVMKKDGSQERLLV----------EDSNLQAPT------WSPSGRSLIFSRKKDGDT 414
             I V++ +G   R +            +S+++ P+      W+  G  L+F     G  
Sbjct: 249 SRIWVLE-EGEGPRCVTCGFVYNVGNSVNSDVRGPSFARALYWAGDG--LLFQATVGGTV 305

Query: 415 GSKLYSIDLNGRNETLINTPAYASD 439
           G  ++   L+G  E ++ TP    D
Sbjct: 306 G--VFRAALSGDVEPVL-TPGGVVD 327



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 81/227 (35%), Gaps = 31/227 (13%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---EDILRVYLMDTRIDRA 249
           L ++D     +  +T   D  + +  ++P+ +++AYA   D     +  V ++D +    
Sbjct: 154 LYLVDSYSGVVEKITDG-DVRVLKAAWAPDGRRIAYAVARDLLKPYLQDVVVLDLKTGEQ 212

Query: 250 PKRIGNFRSMILAPRFSSNGKRALIS--VQKDE---AMDIYSVDLQSNATERLTNTLFIN 304
                 F S +    +S +G+    +  ++         I+ ++ +      +T     N
Sbjct: 213 MTAASGF-SSVSDIAWSPDGRHIAFTGHLRPRGLSSHSRIWVLE-EGEGPRCVTCGFVYN 270

Query: 305 ISASYSPD-------------SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           +  S + D                ++F++   G   ++    +G  +  ++       F 
Sbjct: 271 VGNSVNSDVRGPSFARALYWAGDGLLFQATVGGTVGVFRAALSGDVEPVLTPGGVVDEFV 330

Query: 352 PVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQAPTW 397
           P+    G  I +T     K   + +   DG + R L   ++     W
Sbjct: 331 PL----GGAIVYTYMEANKPKELYIW--DGGEPRRLTRFNDFVLERW 371


>gi|134054651|emb|CAK43496.1| unnamed protein product [Aspergillus niger]
          Length = 645

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 24/203 (11%)

Query: 264 RFSSNGKRALISVQ--------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             S +G R   ++Q           ++ I +VD + ++  + T+ LF +    +SP  + 
Sbjct: 26  SISPDGSRIAYALQPLSKKGDHATSSIWIATVDKEYSS-RQFTSGLFNDEQPQWSPAGTL 84

Query: 316 IVFESDR---EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-- 370
           I F+SDR        +YV+  +G +   ++                + +   +  G K  
Sbjct: 85  IAFKSDRHRPGKSSAIYVLPVDGGEAYPVTPVDCEKPIKTEEQVSKEKVKMIQLFGGKDL 144

Query: 371 --FAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD------GDTGSKLYSI 421
               + +      Q R +V    ++   TWSP    + F   K       G  G+++   
Sbjct: 145 EYSRLRIAHVATGQIRTIVAGHRHVHDFTWSPDSTQICFVAHKGPDINSAGFYGAEILIT 204

Query: 422 DLNGRNETLINT-PAYASDPQWV 443
            ++G  E L+   P   S   W 
Sbjct: 205 SISGSEEKLVAQFPGPISQIAWG 227



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 59/192 (30%), Gaps = 22/192 (11%)

Query: 218 RFSPNQQKVAYATYDDED-----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+  ++AYA              +++     + + ++  +       P++S  G   
Sbjct: 26  SISPDGSRIAYALQPLSKKGDHATSSIWIATVDKEYSSRQFTSGLFNDEQPQWSPAGTLI 85

Query: 273 LISVQK---DEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIV--FESDREG 324
                +    ++  IY + +       +T       I      S +  +++  F      
Sbjct: 86  AFKSDRHRPGKSSAIYVLPVDGGEAYPVTPVDCEKPIKTEEQVSKEKVKMIQLFGGKDLE 145

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--------IGVM 376
             +L +        + I         D  WSP    I F    G            I + 
Sbjct: 146 YSRLRIAHVATGQIRTIVAGHRH-VHDFTWSPDSTQICFVAHKGPDINSAGFYGAEILIT 204

Query: 377 KKDGSQERLLVE 388
              GS+E+L+ +
Sbjct: 205 SISGSEEKLVAQ 216



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 64/196 (32%), Gaps = 17/196 (8%)

Query: 175 SRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           SRI +  +  S       +S+ +   D         S      +P++SP    +A+ +  
Sbjct: 32  SRIAYALQPLSKKGDHATSSIWIATVDKEYSSRQFTSGLFNDEQPQWSPAGTLIAFKSDR 91

Query: 233 DEDI----LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA--LISVQKDEAMDIYS 286
                   + V  +D         +   + +    + S    +   L   +  E   +  
Sbjct: 92  HRPGKSSAIYVLPVDGGEAYPVTPVDCEKPIKTEEQVSKEKVKMIQLFGGKDLEYSRLRI 151

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--------GKEQLYVMQSNGSDQ 338
             + +     +          ++SPDS+QI F + +            ++ +   +GS++
Sbjct: 152 AHVATGQIRTIVAGHRHVHDFTWSPDSTQICFVAHKGPDINSAGFYGAEILITSISGSEE 211

Query: 339 KRISQDKEASYFDPVW 354
           K ++Q          W
Sbjct: 212 KLVAQ-FPGPISQIAW 226


>gi|160874428|ref|YP_001553744.1| peptidase S41 [Shewanella baltica OS195]
 gi|160859950|gb|ABX48484.1| peptidase S41 [Shewanella baltica OS195]
 gi|315266664|gb|ADT93517.1| peptidase S41 [Shewanella baltica OS678]
          Length = 1094

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 115/297 (38%), Gaps = 36/297 (12%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---- 228
           +  R+ F+S+S  +      L  M  DG++ + LT  +D  +   R   +Q KV +    
Sbjct: 226 WQDRLYFISDSDGNDN----LWSMALDGSDAKQLTQFKDWQVRGARM--DQGKVVFQLGA 279

Query: 229 --ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN----GKRALISVQKDEAM 282
               +D        L         +R  ++    +    S++    G + +I+ +     
Sbjct: 280 DIHVFDVAAAKDALLDIELTSDFAQRREHWVKDPMDYASSTDLALAGDKVVITAR----S 335

Query: 283 DIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKR 340
            +    +  +   ++     +   +A  S D   +   SD  G+++++   ++GS   K+
Sbjct: 336 HVAIAGVDGSRLVQVALPGTYRVRNAIMSQDGKSVYALSDMTGQQEIWQFPADGSSGAKQ 395

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
           +++D          S  G  IA     G    + ++    +  + ++ +     P     
Sbjct: 396 LTKDGHTLRMSLNLSNDGRFIAHDDNDG---NVWLLDLKKNTNQKIITNGEGLGPYADIR 452

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLIN------TPAYASDPQWVGFM 446
           WS   R +  ++ + G    ++    ++  + ETL +      +P ++SD QW+ F+
Sbjct: 453 WSGDSRFIALTKSEIGKQRPQIVLYSVDENKVETLTSDKYESYSPTFSSDGQWLYFL 509



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 103/283 (36%), Gaps = 58/283 (20%)

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKF 144
           S     ++   + +F+DW   GA++   G+V+     +L  +  ++DV   K  ++  + 
Sbjct: 244 SMALDGSDAKQLTQFKDWQVRGARMD-QGKVVF----QLGADIHVFDVAAAKDALLDIEL 298

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF-----VSESVVSGII---------- 189
            S  A  R+  H + D +  + + +      +++      V+ + V G            
Sbjct: 299 TSDFAQRRE--HWVKDPMDYASSTDLALAGDKVVITARSHVAIAGVDGSRLVQVALPGTY 356

Query: 190 ----------------------KNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKV 226
                                 +  +     DG+   + LT     +      S + + +
Sbjct: 357 RVRNAIMSQDGKSVYALSDMTGQQEIWQFPADGSSGAKQLTKDGHTLRMSLNLSNDGRFI 416

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDE-- 280
           A+   D      V+L+D + +   K I N     L P    R+S + +   ++  +    
Sbjct: 417 AHDDNDG----NVWLLDLKKNTNQKIITNGEG--LGPYADIRWSGDSRFIALTKSEIGKQ 470

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
              I    +  N  E LT+  + + S ++S D   + F S+R+
Sbjct: 471 RPQIVLYSVDENKVETLTSDKYESYSPTFSSDGQWLYFLSNRQ 513



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 10/153 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSN-ATERLT-NTLFINISASYSPDSSQIVFESDRE 323
           S +GK            +I+      +   ++LT +   + +S + S D     F +  +
Sbjct: 364 SQDGKSVYALSDMTGQQEIWQFPADGSSGAKQLTKDGHTLRMSLNLSNDGR---FIAHDD 420

Query: 324 GKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKD 379
               ++++    +  ++I  + E    Y D  WS     IA TK     ++  I +   D
Sbjct: 421 NDGNVWLLDLKKNTNQKIITNGEGLGPYADIRWSGDSRFIALTKSEIGKQRPQIVLYSVD 480

Query: 380 GSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
            ++   L  D     +PT+S  G+ L F   + 
Sbjct: 481 ENKVETLTSDKYESYSPTFSSDGQWLYFLSNRQ 513



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 6/120 (5%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +  + + + D    +++  L   A  RLT+     + A+ S D   + + ++ EG  ++Y
Sbjct: 42  QTLVFTAEGD----LWTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVY 97

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V+   G   KR+S +  +      W+P+G+ I ++  SG   A   M +    + L   D
Sbjct: 98  VIPVAGGVAKRVSFE-NSRVRVQGWTPKGE-ILYSTDSGFGPANNWMLRSVDPKTLTTTD 155



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 70/208 (33%), Gaps = 20/208 (9%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              T   +A  R+ +  +  L    S++GK        + A ++Y + +     +R++  
Sbjct: 53  WTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVYVIPVAGGVAKRVSFE 112

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   ++P    +       G    ++++S        +    A   + V   + + 
Sbjct: 113 NSRVRVQGWTPKGEILYSTDSGFGPANNWMLRSVDPKTLTTTDLPLADAVEGVIDERNEY 172

Query: 361 IAFTKF-------------SGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSL 404
           + FT+F              G K  +   K     E  L+    D +++ P        L
Sbjct: 173 VYFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQD--RL 230

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            F    DG     L+S+ L+G +   + 
Sbjct: 231 YFISDSDG--NDNLWSMALDGSDAKQLT 256



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 68/213 (31%), Gaps = 25/213 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G        S          S + + VAY   + E    VY++        KR+    S 
Sbjct: 58  GQKAATRLTSLPAEELGATISADGKWVAYVA-NYEGASEVYVIPV-AGGVAKRVSFENSR 115

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQI 316
           +    ++  G   L S           + L+S   + LT T   L   +       +  +
Sbjct: 116 VRVQGWTPKG-EILYSTDSGFGPANNWM-LRSVDPKTLTTTDLPLADAVEGVIDERNEYV 173

Query: 317 VFES------------DREG-KEQLYVMQSNG-SDQKRISQDKEASYFDPV-WSPQGDLI 361
            F               R G K +L+  +    ++ + +S   + S   P+ W    D +
Sbjct: 174 YFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQ---DRL 230

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            F   S     +  M  DGS  + L +  + Q 
Sbjct: 231 YFISDSDGNDNLWSMALDGSDAKQLTQFKDWQV 263


>gi|329961445|ref|ZP_08299550.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           fluxus YIT 12057]
 gi|328531793|gb|EGF58619.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           fluxus YIT 12057]
          Length = 715

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 46/115 (40%), Gaps = 7/115 (6%)

Query: 258 SMILAPRFSSNGKRALIS------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S + K+   S       Q     +I+ ++   +   ++T   +     ++  
Sbjct: 54  GRIGGVAVSPDEKQIAYSVAYYSVSQNKSNNEIFVMNADGSGNTQITRDAWQESQPTWFK 113

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           D  +I F  +  G  Q++ M  +GSD+K++++  +       +SP G  + F   
Sbjct: 114 DGKKIAFLCNESGSSQVWEMNPDGSDRKQLTRY-DGDIEGFSFSPDGKKLLFIAQ 167



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 310 SPDSSQIVF------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD  QI +       S  +   +++VM ++GS   +I++D       P W   G  IAF
Sbjct: 62  SPDEKQIAYSVAYYSVSQNKSNNEIFVMNADGSGNTQITRDA-WQESQPTWFKDGKKIAF 120

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
                    +  M  DGS  + L   D +++  ++SP G+ L+F  +
Sbjct: 121 LCNESGSSQVWEMNPDGSDRKQLTRYDGDIEGFSFSPDGKKLLFIAQ 167



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 54/328 (16%), Positives = 107/328 (32%), Gaps = 78/328 (23%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV      N + VM+ DG+    +T    Q   +P +  + +K+A+   +     +V+ 
Sbjct: 75  YSVSQNKSNNEIFVMNADGSGNTQITRDAWQ-ESQPTWFKDGKKIAFLCNESGSS-QVWE 132

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------------------------ 277
           M+       K++  +   I    FS +GK+ L   Q                        
Sbjct: 133 MNPD-GSDRKQLTRYDGDIEGFSFSPDGKKLLFIAQVKTVKSTADKYPDLPKATGIIVTD 191

Query: 278 ---------KDEAMDIYSVDLQSNATERLTN-------------TLFINISASYSPDSSQ 315
                       A   +  D   NA   + +                I    ++SP S +
Sbjct: 192 LMYKHWDEWVTTAPHPFVADFDGNAINNVKDILEGLPYESPMKPWGGIE-QLAWSPASDK 250

Query: 316 IVFESDR--------EGKEQLYVMQSNGSDQKRI----------SQDKEASYFDPVWSPQ 357
           + F                 +Y    N      +            +      +P +SP 
Sbjct: 251 VAFTCRMKTGLAYAISTDSDIYEYDVNKGGFINLCKKDGKDSDNKNEMAGYDTNPQYSPD 310

Query: 358 GDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKK 410
           G  IA+     + +      + +M +   ++  + +  +SN+ A  W+   +S+ F    
Sbjct: 311 GKYIAWQSMERDGYEADLNRLCIMDRATGEKHFVSQAFESNVDAFLWNKDSQSIYFIGVW 370

Query: 411 DGDTGSKLYSIDL-NGRNETLINTPAYA 437
            G+T  ++Y+I+L +G   T +    Y 
Sbjct: 371 HGET--QIYNINLADGNKLTQLTNGMYD 396



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 91/285 (31%), Gaps = 76/285 (26%)

Query: 218 RFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+++++AY+        ++    +++M+       + I         P +  +GK+ 
Sbjct: 60  AVSPDEKQIAYSVAYYSVSQNKSNNEIFVMNADGSGNTQ-ITRDAWQESQPTWFKDGKKI 118

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----------- 321
                +  +  ++ ++   +  ++LT         S+SPD  +++F +            
Sbjct: 119 AFLCNESGSSQVWEMNPDGSDRKQLTRYDGDIEGFSFSPDGKKLLFIAQVKTVKSTADKY 178

Query: 322 ----------------------REGKEQLYVMQSNGSDQKRISQDKEASYFDP------- 352
                                        +V   +G+    +    E   ++        
Sbjct: 179 PDLPKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNAINNVKDILEGLPYESPMKPWGG 238

Query: 353 ----VWSPQGDLIAFTKF--------------------SGEKFAIGVMKKDGSQERLLVE 388
                WSP  D +AFT                      +   F I + KKDG       E
Sbjct: 239 IEQLAWSPASDKVAFTCRMKTGLAYAISTDSDIYEYDVNKGGF-INLCKKDGKDSDNKNE 297

Query: 389 -DSNLQAPTWSPSGRSLIF-SRKKDGDTG--SKLYSID-LNGRNE 428
                  P +SP G+ + + S ++DG     ++L  +D   G   
Sbjct: 298 MAGYDTNPQYSPDGKYIAWQSMERDGYEADLNRLCIMDRATGEKH 342



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 46/306 (15%), Positives = 100/306 (32%), Gaps = 71/306 (23%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------DD 233
           +    + +  M+ DG++ + LT     I     FSP+ +K+ +               D 
Sbjct: 123 NESGSSQVWEMNPDGSDRKQLTRYDGDIEGF-SFSPDGKKLLFIAQVKTVKSTADKYPDL 181

Query: 234 EDILRVYLMDTRIDRAPKRIG--------NFRSMIL-------------AP--------- 263
                + + D       + +         +F    +             +P         
Sbjct: 182 PKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGNAINNVKDILEGLPYESPMKPWGGIEQ 241

Query: 264 -RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERL-------TNTL----FI 303
             +S    +   + +             DIY  D+       L       ++        
Sbjct: 242 LAWSPASDKVAFTCRMKTGLAYAISTDSDIYEYDVNKGGFINLCKKDGKDSDNKNEMAGY 301

Query: 304 NISASYSPDSSQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           + +  YSPD   I ++S +R+G      +L +M     ++  +SQ  E++    +W+   
Sbjct: 302 DTNPQYSPDGKYIAWQSMERDGYEADLNRLCIMDRATGEKHFVSQAFESNVDAFLWNKDS 361

Query: 359 DLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             I F      +  I  +   DG++   L       A + +  G  ++ +++     G +
Sbjct: 362 QSIYFIGVWHGETQIYNINLADGNKLTQLTNGMYDYA-SLALCGDKMV-AKRHSMSMGDE 419

Query: 418 LYSIDL 423
           +YS+ L
Sbjct: 420 IYSLPL 425



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 9/93 (9%)

Query: 347 ASYFDPVWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSP 399
                   SP    IA+         +     I VM  DGS    +  D+  ++ PTW  
Sbjct: 54  GRIGGVAVSPDEKQIAYSVAYYSVSQNKSNNEIFVMNADGSGNTQITRDAWQESQPTWFK 113

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            G+ + F   + G   S+++ ++ +G +   + 
Sbjct: 114 DGKKIAFLCNESGS--SQVWEMNPDGSDRKQLT 144



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 11/68 (16%)

Query: 390 SNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQW-- 442
             +     SP  + + +S          + ++++ ++ +G   T I   A+  S P W  
Sbjct: 54  GRIGGVAVSPDEKQIAYSVAYYSVSQNKSNNEIFVMNADGSGNTQITRDAWQESQPTWFK 113

Query: 443 ----VGFM 446
               + F+
Sbjct: 114 DGKKIAFL 121


>gi|170115924|ref|XP_001889155.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635945|gb|EDR00246.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1510

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 57/314 (18%), Positives = 101/314 (32%), Gaps = 50/314 (15%)

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                    R+WD      ++G          R   H      Y+ +T     F+    ++
Sbjct: 1124 SGSNDATLRVWDALTGLSVMG--------PLR--GH------YRQVTSV--AFSPDGRYI 1165

Query: 181  SESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            +    SG    ++ V D   G +        D  +    FSP+ + +A  ++D    +RV
Sbjct: 1166 A----SGSHDCTIRVWDALTGQSAMDPLKGHDNGVISVVFSPDGRYIASGSWD--KTVRV 1219

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERL 297
            +   T        IG+   +  +  FS +GK   IS  +D  +  +  D  +     + L
Sbjct: 1220 WNALTGQSVLNPFIGHTHRIN-SVSFSPDGKFI-ISGSEDRRIRAW--DALTGQSIMKPL 1275

Query: 298  TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSP 356
                    S ++SPD   IV  S+    E + V   N         +          +SP
Sbjct: 1276 IGHKGGVESVAFSPDGRYIVSGSN---DEAIRVWDFNAGQSVMDPLKGHGDDVTSVAFSP 1332

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-----APTWSPSGRSLIFSRKKD 411
             G  I           I +          L +          +  +SP GR +       
Sbjct: 1333 DGKYIVSGSCDKT---IRLWDAVTGHT--LGDPFKGHYEAVLSVVFSPDGRHIA-----S 1382

Query: 412  GDTGSKLYSIDLNG 425
            G + + +   D +G
Sbjct: 1383 GSSDNTIRLWDAHG 1396



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 64/356 (17%), Positives = 114/356 (32%), Gaps = 52/356 (14%)

Query: 111  LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR-----KIAHTISDDIYQ- 164
            +V+G V K          R+WD    + ++   +  S    R        H +    Y+ 
Sbjct: 994  IVSGSVDKT--------IRVWDALSGQSVMVL-YRGSDPIGRVTFSPDGKHIVCATQYRI 1044

Query: 165  -----------SITGEKGDFNSRILFVSESVV-----SGIIKNSLCVMDR-DGANIRYLT 207
                        ++  + D +S + FV+ S       SG   N++ V D   G       
Sbjct: 1045 IRFWNALTSECMLSPLEDDEHS-VSFVAFSPNGKHIISGCGNNTIKVWDALTGHTEIDHV 1103

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               +  +    FSPN + +   + D    LRV+   T +       G++R  + +  FS 
Sbjct: 1104 RGHNNGIRSVAFSPNGKHIVSGSNDA--TLRVWDALTGLSVMGPLRGHYR-QVTSVAFSP 1160

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            +G+    S   D  + ++      +A + L       IS  +SPD   I   S     + 
Sbjct: 1161 DGRYIA-SGSHDCTIRVWDALTGQSAMDPLKGHDNGVISVVFSPDGRYIASGS---WDKT 1216

Query: 328  LYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-- 384
            + V  +                     +SP G  I       E   I        Q    
Sbjct: 1217 VRVWNALTGQSVLNPFIGHTHRINSVSFSPDGKFII---SGSEDRRIRAWDALTGQSIMK 1273

Query: 385  -LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
             L+     +++  +SP GR ++      G     +   D N     +     +  D
Sbjct: 1274 PLIGHKGGVESVAFSPDGRYIV-----SGSNDEAIRVWDFNAGQSVMDPLKGHGDD 1324



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 55/309 (17%), Positives = 108/309 (34%), Gaps = 24/309 (7%)

Query: 103  WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI-AHTISDD 161
            WN+L ++ ++         D   V F  +   + K II     ++   W  +  HT  D 
Sbjct: 1048 WNALTSECML----SPLEDDEHSVSFVAFSP-NGKHIISGCGNNTIKVWDALTGHTEIDH 1102

Query: 162  IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFS 220
            +     G +    S      + +VSG    +L V D   G ++        + +    FS
Sbjct: 1103 VRGHNNGIRSVAFSPN---GKHIVSGSNDATLRVWDALTGLSVMGPLRGHYRQVTSVAFS 1159

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+ + +A  ++D    +RV+   T         G+    +++  FS +G+    S   D+
Sbjct: 1160 PDGRYIASGSHDC--TIRVWDALTGQSAMDPLKGHDNG-VISVVFSPDGRYIA-SGSWDK 1215

Query: 281  AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQK 339
             + +++     +             S S+SPD     F        ++    +  G    
Sbjct: 1216 TVRVWNALTGQSVLNPFIGHTHRINSVSFSPDGK---FIISGSEDRRIRAWDALTGQSIM 1272

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPT 396
            +     +       +SP G  I          AI V   +  Q     L     ++ +  
Sbjct: 1273 KPLIGHKGGVESVAFSPDGRYIVSGSNDE---AIRVWDFNAGQSVMDPLKGHGDDVTSVA 1329

Query: 397  WSPSGRSLI 405
            +SP G+ ++
Sbjct: 1330 FSPDGKYIV 1338



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 77/231 (33%), Gaps = 20/231 (8%)

Query: 182  ESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             ++VSG +  ++ V D   G ++  L    D I     FSP+ + +  AT      +  +
Sbjct: 992  MNIVSGSVDKTIRVWDALSGQSVMVLYRGSDPIGRV-TFSPDGKHIVCATQYR---IIRF 1047

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLT 298
                  +     + +    +    FS NGK  +          I   D  +  TE   + 
Sbjct: 1048 WNALTSECMLSPLEDDEHSVSFVAFSPNGKHII---SGCGNNTIKVWDALTGHTEIDHVR 1104

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SP+   IV  S+      L V  +  G       +          +SP 
Sbjct: 1105 GHNNGIRSVAFSPNGKHIVSGSN---DATLRVWDALTGLSVMGPLRGHYRQVTSVAFSPD 1161

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLI 405
            G  IA          I V      Q     L   D+ + +  +SP GR + 
Sbjct: 1162 GRYIASGSHDCT---IRVWDALTGQSAMDPLKGHDNGVISVVFSPDGRYIA 1209



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 77/223 (34%), Gaps = 17/223 (7%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK- 251
            + V D    N           +    +SPN + +   ++D      + + D    +    
Sbjct: 832  VQVWDALTGNNIISLKGHAHYISSVAYSPNGKHIISGSWDK----TIKIWDALTGQCVMG 887

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             +      I +   S +G   + S  +D  + +++     +    LT       S +YSP
Sbjct: 888  PLEGHCDTISSVAVSPDGGHIV-SGSRDTTIRVWNTLTGQSVMNPLTGHHLGVTSVAYSP 946

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGE 369
                IV  S  +G  +++   + G+ Q  +       +      +SP G  I        
Sbjct: 947  SGRHIVSGSL-DGTIRIW---NAGTGQCVMDPLIGHNSIVNCVAYSPNGMNIVSGSVDKT 1002

Query: 370  KFAIGVMK-KDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKK 410
               I V     G    +L   S+ +   T+SP G+ ++ + + 
Sbjct: 1003 ---IRVWDALSGQSVMVLYRGSDPIGRVTFSPDGKHIVCATQY 1042



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 65/192 (33%), Gaps = 15/192 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQ 277
           F+P   K++   +       + + + +I + P R +   ++      +S +G+  +    
Sbjct: 771 FAPQDSKIS-MHFMRYFAKTLTIENGQIKQWPDRCLLRIKTRNGPLAYSPDGRHIV--SG 827

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGS 336
              A+ ++   L  N    L        S +YSP+   I+  S     + + +  +  G 
Sbjct: 828 FVGAVQVWDA-LTGNNIISLKGHAHYISSVAYSPNGKHIISGS---WDKTIKIWDALTGQ 883

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQ 393
                 +    +      SP G  I           I V      Q     L      + 
Sbjct: 884 CVMGPLEGHCDTISSVAVSPDGGHIVSGSRDTT---IRVWNTLTGQSVMNPLTGHHLGVT 940

Query: 394 APTWSPSGRSLI 405
           +  +SPSGR ++
Sbjct: 941 SVAYSPSGRHIV 952


>gi|37521813|ref|NP_925190.1| WD repeat-containing protein [Gloeobacter violaceus PCC 7421]
 gi|35212812|dbj|BAC90185.1| WD-repeat protein [Gloeobacter violaceus PCC 7421]
          Length = 1721

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 82/215 (38%), Gaps = 19/215 (8%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                 +     SP+ + +A A+ D      V + ++          +  S + A  +S +
Sbjct: 1099 GHKSWISSIAHSPDGKAIASASADK----TVKIWNSNGTSFKTLFTD-TSDVRAVSYSPD 1153

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            G+    +   +  ++++    +      +   +      S+SPD  +IV  S  +G   +
Sbjct: 1154 GRLIA-TGNLNGGLNLWL--AEGKWLRFIPAHVQRITGLSFSPDGQKIV-TSSYDGT--I 1207

Query: 329  YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
             V + NG   K ++        D  +SP G  IA          + V + DG   + L  
Sbjct: 1208 KVWRINGKLIKTLT-GHNDKVIDVAFSPDGKWIASASADKT---VKVWRDDGILSKTLKG 1263

Query: 388  EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                +++ T+SP+ + +  +     D   KL+ ++
Sbjct: 1264 HTEQIESVTFSPNSQMIATASV---DKTVKLWQLN 1295



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 11/158 (6%)

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            R+   +S I +   S +GK    S   D+ + I+  +    + + L        + SYSP
Sbjct: 1096 RLVGHKSWISSIAHSPDGKAIA-SASADKTVKIW--NSNGTSFKTLFTDTSDVRAVSYSP 1152

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            D   I    +  G   L++ +       R             +SP G  I  + + G   
Sbjct: 1153 DGRLIA-TGNLNGGLNLWLAE---GKWLRFIPAHVQRITGLSFSPDGQKIVTSSYDGT-- 1206

Query: 372  AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
             I V + +G   + L   +  +    +SP G+ +  + 
Sbjct: 1207 -IKVWRINGKLIKTLTGHNDKVIDVAFSPDGKWIASAS 1243



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 77/227 (33%), Gaps = 17/227 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G    ++ +   +G           + + +   SP+++ +A A +D      + L  T 
Sbjct: 1404 AGGSDGTIKIWGNNG-RQISTLRGHIRTVHDISISPDKKMIASAGWDK----TIKLWHT- 1457

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 + +      + +   S NG+  +         +I            L        
Sbjct: 1458 SGELIQTLREHSRPVFSVAISPNGQYLV---SAGADKNIIVWKADGTKLRVLKGHSSEVN 1514

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               ++    +I+      G +   ++ +    +KR  +D+  S      SP G +IA   
Sbjct: 1515 RVFFTASGQEII----SGGADGKLILWNIDGSKKRTIEDRGNSLRSLSISPDGRIIAVGS 1570

Query: 366  FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
              G  F +    KDG      V  ++ +++  +SP G  +  +   D
Sbjct: 1571 VDG-HFKLW--HKDGRLLWQTVAHETEIRSIAYSPDGALIATAAGND 1614



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 18/156 (11%)

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            RL        S ++SPD   I   S     + + +  SNG+  K +  D         +S
Sbjct: 1096 RLVGHKSWISSIAHSPDGKAIASAS---ADKTVKIWNSNGTSFKTLFTDTS-DVRAVSYS 1151

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            P G LIA    +G    + +   +G   R +      +   ++SP G+ ++ S     D 
Sbjct: 1152 PDGRLIATGNLNGG---LNLWLAEGKWLRFIPAHVQRITGLSFSPDGQKIVTSSY---DG 1205

Query: 415  GSKLYSID------LNGRNETLINTPAYASDPQWVG 444
              K++ I+      L G N+ +I+  A++ D +W+ 
Sbjct: 1206 TIKVWRINGKLIKTLTGHNDKVIDV-AFSPDGKWIA 1240



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 100/239 (41%), Gaps = 22/239 (9%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G +   L +   +G  +R++     +I     FSP+ QK+  ++YD    ++V+ ++  
Sbjct: 1159 TGNLNGGLNLWLAEGKWLRFIPAHVQRITGL-SFSPDGQKIVTSSYD--GTIKVWRIN-- 1213

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFIN 304
              +  K +      ++   FS +GK    S   D+ + ++  D + S   +   +T  I 
Sbjct: 1214 -GKLIKTLTGHNDKVIDVAFSPDGKWIA-SASADKTVKVWRDDGILSKTLK--GHTEQIE 1269

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++SP+S  I   +  +   +L+ +        R  +      +D V+S  G   A  
Sbjct: 1270 -SVTFSPNSQMIA-TASVDKTVKLWQLN---GVLIRTVRGHTDGVYDVVFSQDGQTFATG 1324

Query: 365  KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    I +   DG+  R L    +++ + ++  S R+L+       D+  +++ + 
Sbjct: 1325 SSDRT---IMLWHVDGTLIRTLRGHSASVNSLSFGRSDRTLV---TGGDDSNLRIWKLS 1377


>gi|322421404|ref|YP_004200627.1| tetratricopeptide repeat-containing protein [Geobacter sp. M18]
 gi|320127791|gb|ADW15351.1| Tetratricopeptide repeat [Geobacter sp. M18]
          Length = 2763

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 83/225 (36%), Gaps = 16/225 (7%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           Q +     S + + +A     D                P+ +      I  P F++    
Sbjct: 62  QSVLYAARSLDGRWIATVEKGDAGYELWLHPAGNTAELPRLLQKSPVRISTPAFNATASL 121

Query: 272 ALISVQKDE-AMDIYSVDL-QSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQ 327
              + ++D+   DI+ +DL +     RLT       + S++   + + ++ +  G  + +
Sbjct: 122 IAFADERDDLKGDIWLLDLGRPGEPRRLTGNDAGEDAPSFARQGNTLYYQRELPGIERRE 181

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLL 386
           +  +  N    +R+    +A++  P  SP G+ IAF     +    + +  +  ++   L
Sbjct: 182 IMRLDLNTGKSERLEVGIDAAFAAP--SPDGNRIAFVSRDQDPGGDLWLWDRGANRLTRL 239

Query: 387 VEDS-NLQAPTWSPSGRSLIFSR-------KKDGDTGSKLYSIDL 423
              +     P W     +L+F+R          G  G  ++ + L
Sbjct: 240 TSGAERDLYPAW-QDDETLLFTRFAPPAGDSASGPEGGAIFRLRL 283



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 57/280 (20%), Positives = 104/280 (37%), Gaps = 35/280 (12%)

Query: 183 SVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +V  G     L +    + A +  L       +  P F+     +A+A   D+    ++L
Sbjct: 78  TVEKGDAGYELWLHPAGNTAELPRLLQKSPVRISTPAFNATASLIAFADERDDLKGDIWL 137

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTN 299
           +D      P+R+    +   AP F+  G       +       +I  +DL +  +ERL  
Sbjct: 138 LDLGRPGEPRRLTGNDAGEDAPSFARQGNTLYYQRELPGIERREIMRLDLNTGKSERL-- 195

Query: 300 TLFINIS-ASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + I+ + A+ SPD ++I F S D++    L++     +   R++   E   + P W   
Sbjct: 196 EVGIDAAFAAPSPDGNRIAFVSRDQDPGGDLWLWDRGANRLTRLTSGAERDLY-PAWQDD 254

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERL------------LVEDSN-LQAPTWSPSGRSL 404
             L+ FT+F+          + G+  RL            L        AP   P+G  +
Sbjct: 255 ETLL-FTRFAPPAGDSASGPEGGAIFRLRLGAGTLPAAFPLTSGLLSTAAPV--PAGDQV 311

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ--W 442
           +F        G ++ S+  +G             DP   W
Sbjct: 312 LFVA--GEAAGGQVMSLPSSGEIP-------DQPDPAGQW 342



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 60/145 (41%), Gaps = 10/145 (6%)

Query: 312 DSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGE 369
           D   I      +   +L++  + N ++  R+ Q        P ++    LIAF  +    
Sbjct: 72  DGRWIATVEKGDAGYELWLHPAGNTAELPRLLQKSPVRISTPAFNATASLIAFADERDDL 131

Query: 370 KFAIGVMKKD--GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GR 426
           K  I ++     G   RL   D+   AP+++  G +L + R+  G    ++  +DLN G+
Sbjct: 132 KGDIWLLDLGRPGEPRRLTGNDAGEDAPSFARQGNTLYYQRELPGIERREIMRLDLNTGK 191

Query: 427 NETL-----INTPAYASDPQWVGFM 446
           +E L         A + D   + F+
Sbjct: 192 SERLEVGIDAAFAAPSPDGNRIAFV 216



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 36/102 (35%), Gaps = 6/102 (5%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDS-NLQAPTWSPSG 401
              S      S  G  IA  +     + + +     + E  RLL +    +  P ++ + 
Sbjct: 60  TPQSVLYAARSLDGRWIATVEKGDAGYELWLHPAGNTAELPRLLQKSPVRISTPAFNATA 119

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN--GRNETLINTPAYASDPQ 441
             + F+ ++D D    ++ +DL   G    L    A    P 
Sbjct: 120 SLIAFADERD-DLKGDIWLLDLGRPGEPRRLTGNDAGEDAPS 160


>gi|119492582|ref|ZP_01623800.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
 gi|119453051|gb|EAW34221.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
          Length = 1649

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 103/266 (38%), Gaps = 21/266 (7%)

Query: 162  IYQSITGEKGD-----FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            I +++T  K       F+  +    + + +     ++ +  R+G N+          +  
Sbjct: 1053 INKTLTDHKDTVWCVTFSPDLSPERQIIATASKDKTIKLWSREG-NLIMTLRGHQNEVKW 1111

Query: 217  PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              FSP+ Q +A A+ D      + + +             +  +L+  FS +  + + S 
Sbjct: 1112 VTFSPDGQLIASASQDQ----TIKVWNRNTGELLTTFNGHQDSVLSVSFSPD-SQLITSA 1166

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             KD+ + ++  +L+    + L        + ++SPD   I   SD +   +L+    +  
Sbjct: 1167 SKDKTIKLW--NLEGKLIQTLNGHSDAVWTVNFSPDGEMIASGSD-DYTIKLWKRNDSTY 1223

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAP 395
               +  +  +    +  +SP G  IA    +G    + +   DG+    L+     +   
Sbjct: 1224 QIFKTLKQDQTPVNNISFSPDGQRIASGSSNG---EVKLWASDGTLISTLIGHGGAVNQV 1280

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +++   R+LI +     D   +L+S+
Sbjct: 1281 SFTSDSRTLISASS---DWTVRLWSM 1303



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 75/217 (34%), Gaps = 18/217 (8%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            L       +    L   +D +L     SP+ Q +A A+ D      + L + +     K 
Sbjct: 1003 LWRAAYFTSERNRLQDHQDSVLSV-SVSPDGQLIASASSDQ----TIKLWN-KNGVINKT 1056

Query: 253  IGNFRSMILAPRFSSN---GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            + + +  +    FS +    ++ + +  KD+ + ++S   + N    L          ++
Sbjct: 1057 LTDHKDTVWCVTFSPDLSPERQIIATASKDKTIKLWS--REGNLIMTLRGHQNEVKWVTF 1114

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            SPD   I   S     + + V   N  +        + S     +SP   LI        
Sbjct: 1115 SPDGQLIASASQ---DQTIKVWNRNTGELLTTFNGHQDSVLSVSFSPDSQLITSASKDKT 1171

Query: 370  KFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
               I +   +G   + L   S+ +    +SP G  + 
Sbjct: 1172 ---IKLWNLEGKLIQTLNGHSDAVWTVNFSPDGEMIA 1205



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 100/271 (36%), Gaps = 33/271 (12%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +    N+  + +      +   P     +    FSP+   +A A+ D      + L  T 
Sbjct: 1333 TPSDNNTFRLWNPTQGTRQLTVPGHQDQVTGISFSPDDTMMASASLDK----TIRLWQTN 1388

Query: 246  IDRAPKRIGNFRSMI---LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                   +G+ + +     +P  S   ++ + S  +D+ + ++  D        L +   
Sbjct: 1389 GKPIRTLLGHLQGVNDVSFSPERSPE-RQLIASASQDQTVKVWQRD--GKLLYTLRHDDA 1445

Query: 303  INISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +  S S+SP+   +   S        +R+  + +  + SN      +S     ++     
Sbjct: 1446 V-TSVSFSPNGRILASASRDQTVRLWNRQDGKLIAKLPSN-RKFSSVSFSPTDNHLIAAA 1503

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            +  G +  +    G    I ++   G+ ++ + +       ++SP G +L  + +   D 
Sbjct: 1504 TDDGSIKLWRSQDGNWQDISILTPIGAHKKAVYQ------VSFSPDGETLASASE---DG 1554

Query: 415  GSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
              K++  D  G    L+     +S  +WVGF
Sbjct: 1555 TVKIW--DHTGT--LLLTLQEGSSRVEWVGF 1581



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 78/218 (35%), Gaps = 22/218 (10%)

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            +   ++ LR             R+ + +  +L+   S +G+    S   D+ + ++  + 
Sbjct: 993  SESAQETLRHLWRAAYFTSERNRLQDHQDSVLSVSVSPDGQLIA-SASSDQTIKLW--NK 1049

Query: 290  QSNATERLTNTLFINISASYSPD---SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                 + LT+        ++SPD     QI+  + ++   +L+   S   +     +  +
Sbjct: 1050 NGVINKTLTDHKDTVWCVTFSPDLSPERQIIATASKDKTIKLW---SREGNLIMTLRGHQ 1106

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSL 404
                   +SP G LIA          I V  ++  +             + ++SP  + +
Sbjct: 1107 NEVKWVTFSPDGQLIASASQDQT---IKVWNRNTGELLTTFNGHQDSVLSVSFSPDSQLI 1163

Query: 405  IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                    D   KL+  +L G+   LI T    SD  W
Sbjct: 1164 ---TSASKDKTIKLW--NLEGK---LIQTLNGHSDAVW 1193



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 55/330 (16%), Positives = 106/330 (32%), Gaps = 68/330 (20%)

Query: 159  SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            SD ++       G+          +  S      L   +     I          +    
Sbjct: 1189 SDAVWTVNFSPDGE--------MIASGSDDYTIKLWKRNDSTYQIFKTLKQDQTPVNNIS 1240

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+ Q++A  + + E    V L  +        IG     +    F+S+ +   IS   
Sbjct: 1241 FSPDGQRIASGSSNGE----VKLWASDGTLISTLIG-HGGAVNQVSFTSDSRTL-ISASS 1294

Query: 279  DEAMDIYSV---------------------DLQSN------------------ATERLTN 299
            D  + ++S+                     +                       T +LT 
Sbjct: 1295 DWTVRLWSMENIPPKVFQPEYKVFGLGASFNNDGKLIATPSDNNTFRLWNPTQGTRQLTV 1354

Query: 300  TLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---QDKEASYFDPVW 354
                +     S+SPD + +   S     + + + Q+NG   + +    Q      F P  
Sbjct: 1355 PGHQDQVTGISFSPDDTMMASASL---DKTIRLWQTNGKPIRTLLGHLQGVNDVSFSPER 1411

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            SP+  LIA          + V ++DG     L  D  + + ++SP+GR L  + +   D 
Sbjct: 1412 SPERQLIASASQDQT---VKVWQRDGKLLYTLRHDDAVTSVSFSPNGRILASASR---DQ 1465

Query: 415  GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              +L++   +G+    + +    S   +  
Sbjct: 1466 TVRLWN-RQDGKLIAKLPSNRKFSSVSFSP 1494



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 54/338 (15%), Positives = 113/338 (33%), Gaps = 41/338 (12%)

Query: 114  GRVIKEGKDRLRV--------EFRLWDVKDRKQIIGKKFFSSPASWRKIAHT-------- 157
            G +I  G D   +         ++++    + Q        SP   R  + +        
Sbjct: 1201 GEMIASGSDDYTIKLWKRNDSTYQIFKTLKQDQTPVNNISFSPDGQRIASGSSNGEVKLW 1260

Query: 158  ISDDIYQSITGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
             SD    S     G   +++ F S+S    S     ++ +   +    +   P       
Sbjct: 1261 ASDGTLISTLIGHGGAVNQVSFTSDSRTLISASSDWTVRLWSMENIPPKVFQPEYKVFGL 1320

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               F+ + + +A  + ++   L      TR    P      +  +    FS +      S
Sbjct: 1321 GASFNNDGKLIATPSDNNTFRLWNPTQGTRQLTVP----GHQDQVTGISFSPDDTMMA-S 1375

Query: 276  VQKDEAMDIYSVDLQSNATER--LTNTLFINI---SASYSPDSSQIVFESDREGKEQLYV 330
               D+ + ++  +       R  L +   +N    S   SP+   I   S     + + V
Sbjct: 1376 ASLDKTIRLWQTN---GKPIRTLLGHLQGVNDVSFSPERSPERQLIASASQ---DQTVKV 1429

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             Q +G  +   +   + +     +SP G ++A      +   +   ++DG     L  + 
Sbjct: 1430 WQRDG--KLLYTLRHDDAVTSVSFSPNGRILASASRD-QTVRLW-NRQDGKLIAKLPSNR 1485

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               + ++SP+   LI +   DG    KL+    +G  +
Sbjct: 1486 KFSSVSFSPTDNHLIAAATDDGS--IKLWR-SQDGNWQ 1520



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 84/282 (29%), Gaps = 48/282 (17%)

Query: 91   ITNPDSIPRFQDW---------NSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKD 135
            I  P     F+ W            G Q  VTG +     D +          RLW    
Sbjct: 1331 IATPSDNNTFRLWNPTQGTRQLTVPGHQDQVTG-ISFSPDDTMMASASLDKTIRLWQTNG 1389

Query: 136  R--KQIIGK-------KFFSSPASWRKIAHTISDD----IYQS-----ITGEKGDFNSRI 177
            +  + ++G         F    +  R++  + S D    ++Q       T    D  + +
Sbjct: 1390 KPIRTLLGHLQGVNDVSFSPERSPERQLIASASQDQTVKVWQRDGKLLYTLRHDDAVTSV 1449

Query: 178  LFVSESVVSGIIKNSLCVM---DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
             F     +         V     +DG  I  L  +R        FSP    +  A  DD 
Sbjct: 1450 SFSPNGRILASASRDQTVRLWNRQDGKLIAKLPSNRKFSSV--SFSPTDNHLIAAATDDG 1507

Query: 235  DI--LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             I   R    + +       IG  +  +    FS +G+    S  +D  + I+  D    
Sbjct: 1508 SIKLWRSQDGNWQDISILTPIGAHKKAVYQVSFSPDGETLA-SASEDGTVKIW--DHTGT 1564

Query: 293  ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                L           +SPD   +      +   ++ V   +
Sbjct: 1565 LLLTLQEGSSRVEWVGFSPDGQLV----SIDATNRVSVWNLD 1602


>gi|55377098|ref|YP_134948.1| prolyl oligopeptidase family protein [Haloarcula marismortui ATCC
           43049]
 gi|55229823|gb|AAV45242.1| prolyl oligopeptidase family protein [Haloarcula marismortui ATCC
           43049]
          Length = 574

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 91/267 (34%), Gaps = 14/267 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMD- 243
            G  +  L  +D DG  I  LT   D       +SP+ ++ A+A+   DE +  +Y+ D 
Sbjct: 48  GGNERAQLYRLDADGH-IHELTGMPDAKHRWGGWSPDGERFAFASNRRDEAVFDIYVQDR 106

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLF 302
                  + +           FS +G+R L+S        DIY +D+ S     LT    
Sbjct: 107 DATGDDAELVWEGDGWFSVGGFSPDGERLLVSEAHSSFDQDIYVLDIDSGNRSHLTPHEG 166

Query: 303 --INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                SAS+ P+   +   +D E         S   D   +  D + +            
Sbjct: 167 KVRYTSASWGPEGEAVYLVTDAESDTLELARLSLEGDLDIVRSDDQWNIDGVALDKDSGR 226

Query: 361 IAFTKFSGEKFAIGVMKKDG--SQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDT- 414
           + +++       + V +  G  + E     D         +W P      F+    G T 
Sbjct: 227 LVYSRNIDGYNELTVGELTGPTTIETFPTPDLPGGLAGGVSWGPDAER--FAVSVTGRTV 284

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQ 441
            + ++ ++            + A  PQ
Sbjct: 285 NTNVFVVETETGESEQWTAASTAGIPQ 311



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 12/179 (6%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQS 333
           +       ++S+       E+LT          +SP+  ++VF  D  G E  QLY + +
Sbjct: 1   MNTTGVAQLWSLPEPHGWPEQLTFYDDTVSFVDFSPERQELVFGMDEGGNERAQLYRLDA 60

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQ---ERLLVE 388
           +G   + ++   +A +    WSP G+  AF     ++  F I V  +D +    E +   
Sbjct: 61  DGHIHE-LTGMPDAKHRWGGWSPDGERFAFASNRRDEAVFDIYVQDRDATGDDAELVWEG 119

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYAS--DPQWVG 444
           D       +SP G  L+   +        +Y +D++ G    L             W  
Sbjct: 120 DGWFSVGGFSPDGERLL-VSEAHSSFDQDIYVLDIDSGNRSHLTPHEGKVRYTSASWGP 177



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 66/186 (35%), Gaps = 12/186 (6%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTL-FINIS 306
           P+++  +   +    FS   +  +  + +       +Y +D        LT      +  
Sbjct: 19  PEQLTFYDDTVSFVDFSPERQELVFGMDEGGNERAQLYRLDAD-GHIHELTGMPDAKHRW 77

Query: 307 ASYSPDSSQIVFESDR--EGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +SPD  +  F S+R  E    +YV   +   D   +  + +  +    +SP G+ +  
Sbjct: 78  GGWSPDGERFAFASNRRDEAVFDIYVQDRDATGDDAELVWEGDGWFSVGGFSPDGERLLV 137

Query: 364 TKFSGE-KFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           ++        I V+  D      L          + +W P G ++      + DT  +L 
Sbjct: 138 SEAHSSFDQDIYVLDIDSGNRSHLTPHEGKVRYTSASWGPEGEAVYLVTDAESDT-LELA 196

Query: 420 SIDLNG 425
            + L G
Sbjct: 197 RLSLEG 202



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 84/238 (35%), Gaps = 13/238 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQ 277
           FSP +Q++ +   D+    R  L     D     +            +S +G+R   +  
Sbjct: 34  FSPERQELVFG-MDEGGNERAQLYRLDADGHIHELTGMPDAKHRWGGWSPDGERFAFASN 92

Query: 278 KDEA--MDIYSVDLQ--SNATERLTNTLFINISASYSPDSSQ-IVFESDREGKEQLYVMQ 332
           + +    DIY  D     +  E +           +SPD  + +V E+     + +YV+ 
Sbjct: 93  RRDEAVFDIYVQDRDATGDDAELVWEGDGWFSVGGFSPDGERLLVSEAHSSFDQDIYVLD 152

Query: 333 SNGSDQKRISQ-DKEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKDGSQERLLVED- 389
            +  ++  ++  + +  Y    W P+G+ +   T    +   +  +  +G  + +  +D 
Sbjct: 153 IDSGNRSHLTPHEGKVRYTSASWGPEGEAVYLVTDAESDTLELARLSLEGDLDIVRSDDQ 212

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--TPAYASDP-QWVG 444
            N+           L++SR  DG     +  +      ET      P   +    W  
Sbjct: 213 WNIDGVALDKDSGRLVYSRNIDGYNELTVGELTGPTTIETFPTPDLPGGLAGGVSWGP 270


>gi|91773689|ref|YP_566381.1| hypothetical protein Mbur_1741 [Methanococcoides burtonii DSM 6242]
 gi|91712704|gb|ABE52631.1| Hypothetical protein Mbur_1741 [Methanococcoides burtonii DSM 6242]
          Length = 559

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 50/298 (16%), Positives = 106/298 (35%), Gaps = 41/298 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-----TPSRDQIL 214
           D     +    GDFNS ++            ++L + + +G++++ +     + S  + +
Sbjct: 132 DASLFLLPKGGGDFNSSLI------------SALYIANANGSDVKRVAWGESSYSGSKSV 179

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-------LAPR--- 264
             P +S +    AY     E + RV      I  +  ++     +          P    
Sbjct: 180 TAPVWSHSGAYFAYMELSKERMYRVTSSQLIIMSSDMQLTQQVELDPEMIELESDPSNFK 239

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S    +          + IY ++  +N    L +      +  +SPD  +IVF    + 
Sbjct: 240 YSPTEDKIA--ALMPGNLIIYDLEENTNLVFNLPDDTADVENMEWSPDGEKIVFI---QN 294

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKK 378
              + ++     +  +I   +    +D  WSP  + + F + SG        + I  +  
Sbjct: 295 ICNIIIVDIEKRELNQIYSAEHVGMYDAQWSPDSNKLIFYEISGSEEDGTLNYDIYAIND 354

Query: 379 DGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            G     +   +  + +   W P    L+  +K+  D    LYS+ + G+   LI   
Sbjct: 355 SGGNPEKIAVFDSGSSRVIQWYPDSEKLL-VKKRSDDDTYALYSLSIIGKMGKLIEGN 411


>gi|332707508|ref|ZP_08427552.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332353722|gb|EGJ33218.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1182

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 51/252 (20%), Positives = 94/252 (37%), Gaps = 17/252 (6%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VSG   +++ + + DG   +       ++ +    SP+ Q +A    D     R+ L +T
Sbjct: 834  VSGSYPSTITLWNIDGLEPKRFGFGSTKV-WGVTISPDNQLLASGHDDH----RIKLWNT 888

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                  K +      +   +FS++GK    S   D  + ++ VD        LT      
Sbjct: 889  SDGSLNKTLTGHTDDVWRVKFSADGKLLA-SASLDNTVKLWDVD-NGKEIYTLTGHTSNV 946

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++  D   +   SD      + + +    +  R  +    S  D  ++P G  IA  
Sbjct: 947  RSITFRSDGRILASGSD---DRTIKLWRVQDGELLRTFKGHLHSIRDLSFTPDGQNIATA 1003

Query: 365  KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             F G    +    +DG   ++    DS L   + SP+G+ L       G  G KL++ + 
Sbjct: 1004 SFDGR--ILFWQVEDGRMVKVFDNIDSWLATISISPNGKLLA---SGGGYRGIKLWN-NS 1057

Query: 424  NGRNETLINTPA 435
            +G     +    
Sbjct: 1058 DGTIVKELPGHG 1069



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 93/223 (41%), Gaps = 20/223 (8%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            +  +    +SP+ Q +            V L +++        G+   ++   +FS +G
Sbjct: 563 HNGPISMVSWSPDGQLLV----SGGGDTLVKLWNSQGQLMHTLRGHSEQIV-NVQFSPDG 617

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           K    S  KD  + +++V   S A   L +        S+SPDS  +   SD  G  + +
Sbjct: 618 KLVA-SGSKDGTVKLWNVATGSLAKTILAHNNTWVRGLSFSPDSKLLA-SSDSRGWVKFW 675

Query: 330 VMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
               +   +  ++  +  + +     +SP G ++A +  S     +  ++ DGS  R L 
Sbjct: 676 ----DVETKALVTSIRAHNSWVTSVKFSPDGTILA-STNSDNTIKLWNVE-DGSLIRTLT 729

Query: 388 -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              S ++   ++  G++L  S +   DT  KL++++ +G   T
Sbjct: 730 GHQSGVRNVDFNADGKTLASSSE---DTTIKLWNLE-DGTEIT 768



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 87/242 (35%), Gaps = 21/242 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S  + N++ + D D     Y        +    F  + + +A  + D         +   
Sbjct: 918  SASLDNTVKLWDVDNGKEIYTLTGHTSNVRSITFRSDGRILASGSDDR-------TIKLW 970

Query: 246  IDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
              +  + +  F+  + + R   F+ +G+    +   D  +  + V+      +   N   
Sbjct: 971  RVQDGELLRTFKGHLHSIRDLSFTPDGQNIA-TASFDGRILFWQVE-DGRMVKVFDNIDS 1028

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               + S SP+   +       G   + +  ++     +             +SP G L+A
Sbjct: 1029 WLATISISPNGKLLA---SGGGYRGIKLWNNSDGTIVKELPGHGIWIRSLRFSPNGKLLA 1085

Query: 363  FTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               F      +  ++ DGS  R+L      ++  ++S  G+ L  S  +DG    KL+++
Sbjct: 1086 SGSFD-RTVKLWRVE-DGSLLRILEGHLGRVEDVSFSADGKLLA-SASRDGTV--KLWNL 1140

Query: 422  DL 423
            DL
Sbjct: 1141 DL 1142



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 89/279 (31%), Gaps = 41/279 (14%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            RV      +L          +LWDV + K+I         ++ R I              
Sbjct: 906  RVKFSADGKLLASASLDNTVKLWDVDNGKEIY--TLTGHTSNVRSITFR----------- 952

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                 + RIL    +  S      L  + +DG  +R         + +  F+P+ Q +A 
Sbjct: 953  ----SDGRIL----ASGSDDRTIKLWRV-QDGELLRT-FKGHLHSIRDLSFTPDGQNIAT 1002

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            A++D     R+        R  K   N  S +     S NGK    S      + +++ +
Sbjct: 1003 ASFDG----RILFWQVEDGRMVKVFDNIDSWLATISISPNGKLLA-SGGGYRGIKLWN-N 1056

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEA 347
                  + L        S  +SP+   +   S DR     + + +       RI +    
Sbjct: 1057 SDGTIVKELPGHGIWIRSLRFSPNGKLLASGSFDRT----VKLWRVEDGSLLRILEGHLG 1112

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
               D  +S  G L+A     G    +  +  +      L
Sbjct: 1113 RVEDVSFSADGKLLASASRDGTV-KLWNLDLELDDLMQL 1150



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 61/404 (15%), Positives = 133/404 (32%), Gaps = 55/404 (13%)

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLG---------AQVLVTGRVIKEG---- 120
             +   +++S     Q + +       + WNS G         ++ +V  +   +G    
Sbjct: 562 AHNGPISMVSWSPDGQLLVSGGGDTLVKLWNSQGQLMHTLRGHSEQIVNVQFSPDGKLVA 621

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG-----DFNS 175
                   +LW+V      + K   +   +W +      D    + +  +G     D  +
Sbjct: 622 SGSKDGTVKLWNVATGS--LAKTILAHNNTWVRGLSFSPDSKLLASSDSRGWVKFWDVET 679

Query: 176 RILFVSESV-----------------VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEP 217
           + L  S                     S    N++ + +  DG+ IR LT  +  +    
Sbjct: 680 KALVTSIRAHNSWVTSVKFSPDGTILASTNSDNTIKLWNVEDGSLIRTLTGHQSGVRNV- 738

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+ + + +A ++ D      + L +         +   +       FS +GK  L+S  
Sbjct: 739 DFNADGKTLASSSEDT----TIKLWNLEDGTEITTLKGHKGTTWGVNFSRDGK-LLVSCA 793

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + +++++      +          + S+ P++ +I+          + +   +G +
Sbjct: 794 DDGTIKLWNLENLEAEPQTFVGPQGRVTTVSFHPNNQKILVSG--SYPSTITLWNIDGLE 851

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLV-EDSNLQAP 395
            KR         +    SP   L+A      +   I +    DGS  + L     ++   
Sbjct: 852 PKRFGF-GSTKVWGVTISPDNQLLASGH---DDHRIKLWNTSDGSLNKTLTGHTDDVWRV 907

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            +S  G+ L  +     D   KL+ +D      TL    +    
Sbjct: 908 KFSADGKLLASASL---DNTVKLWDVDNGKEIYTLTGHTSNVRS 948


>gi|298251192|ref|ZP_06974996.1| hypothetical protein Krac_3977 [Ktedonobacter racemifer DSM 44963]
 gi|297549196|gb|EFH83063.1| hypothetical protein Krac_3977 [Ktedonobacter racemifer DSM 44963]
          Length = 540

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 76/217 (35%), Gaps = 17/217 (7%)

Query: 218 RFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRAL 273
            +S + + +A         +    + + +    ++   +       ++   +S +G    
Sbjct: 306 AWSADGKSIASVYSSGAGADGPAVIQIWNPFTGKSSTSLTTEPGWSISDISWSPDGAEIA 365

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYV 330
            S+     +    V + +  T ++     +N   I + + P S  + F    +G     V
Sbjct: 366 ASMSNSGNLPQSQVQVWNVQTRQVVFQQSMNQYVIGSIWQPGSHNLAFSLLPDGSYNAAV 425

Query: 331 MQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE- 388
           +Q  N   ++RI      +     WS  G  IA+    G     GV   D +  + +   
Sbjct: 426 LQIWNVQTKQRIKTFAGIAANTMAWSSDGKEIAYDNRVGGGHTAGVTILDSNTGQKVYTY 485

Query: 389 --------DSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                     N+  P WSP G+ ++ S     +T SK
Sbjct: 486 SVSAKANQSVNISVPAWSPDGKYIVTSESTVSNTPSK 522



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 83/272 (30%), Gaps = 28/272 (10%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V+  +G N + +T  R   +     +P     A +       + +             +
Sbjct: 240 RVLIVNGQNGKIVTSYRANSIAS---TPTGTVSAVSASTALTSVELPATKMSTLSYRLPL 296

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-----DLQSNATERLTNTLFINISA- 307
            +  S   +  +S++GK            D  +V          ++  LT     +IS  
Sbjct: 297 SSAPSF-RSIAWSADGKSIASVYSSGAGADGPAVIQIWNPFTGKSSTSLTTEPGWSISDI 355

Query: 308 SYSPDSSQIVFESDREGK---EQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIA 362
           S+SPD ++I       G     Q+ V        +++   +  + +    +W P    +A
Sbjct: 356 SWSPDGAEIAASMSNSGNLPQSQVQVWNV---QTRQVVFQQSMNQYVIGSIWQPGSHNLA 412

Query: 363 FTKFSGEKFA---IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           F+      +    + +      Q              WS  G+ + +  +  G   + + 
Sbjct: 413 FSLLPDGSYNAAVLQIWNVQTKQRIKTFAGIAANTMAWSSDGKEIAYDNRVGGGHTAGVT 472

Query: 420 SIDLNGRNETLI-------NTPAYASDPQWVG 444
            +D N   +          N     S P W  
Sbjct: 473 ILDSNTGQKVYTYSVSAKANQSVNISVPAWSP 504



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 73/233 (31%), Gaps = 29/233 (12%)

Query: 95  DSIPRFQ--DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
            S P F+   W++ G + + +      G D   V  ++W+    K        ++   W 
Sbjct: 297 SSAPSFRSIAWSADG-KSIASVYSSGAGADGPAV-IQIWNPFTGK---SSTSLTTEPGW- 350

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
                       SI+      +   +  S S    + ++ + V +           S +Q
Sbjct: 351 ------------SISDISWSPDGAEIAASMSNSGNLPQSQVQVWNV-QTRQVVFQQSMNQ 397

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +    + P    +A++   D       L    +    +             +SS+GK  
Sbjct: 398 YVIGSIWQPGSHNLAFSLLPDGSYNAAVLQIWNVQTKQRIKTFAGIAANTMAWSSDGKEI 457

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTL-------FINIS-ASYSPDSSQIV 317
               +           L SN  +++            +NIS  ++SPD   IV
Sbjct: 458 AYDNRVGGGHTAGVTILDSNTGQKVYTYSVSAKANQSVNISVPAWSPDGKYIV 510



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/184 (9%), Positives = 55/184 (29%), Gaps = 33/184 (17%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK--FFSSPASWRKIAHTIS 159
            W+  GA+       +    +  + + ++W+V+ R+ +  +    +   + W+  +H ++
Sbjct: 356 SWSPDGAE---IAASMSNSGNLPQSQVQVWNVQTRQVVFQQSMNQYVIGSIWQPGSHNLA 412

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
                               +            +  +       + +            +
Sbjct: 413 ------------------FSLLPDGSYNAAVLQIWNV----QTKQRIKTFAGIAANTMAW 450

Query: 220 SPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-----PRFSSNGKRAL 273
           S + +++AY           V ++D+   +             +     P +S +GK  +
Sbjct: 451 SSDGKEIAYDNRVGGGHTAGVTILDSNTGQKVYTYSVSAKANQSVNISVPAWSPDGKYIV 510

Query: 274 ISVQ 277
            S  
Sbjct: 511 TSES 514



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 66/191 (34%), Gaps = 24/191 (12%)

Query: 268 NGKRALISVQKD---EAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVF-ES 320
           +G+R               +   D  +        L     ++I  ++SP S  +    S
Sbjct: 179 DGQRVAAVRNGTNAIGGGTVEIWDALTGLHRVNLELNPNEVLSIPQAWSPKSELLAVATS 238

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKD 379
           +R       V+  NG + K ++            +P G + A +  +      +   K  
Sbjct: 239 ER-------VLIVNGQNGKIVT---SYRANSIASTPTGTVSAVSASTALTSVELPATKMS 288

Query: 380 GSQERL-LVEDSNLQAPTWSPSGRSLI--FSR--KKDGDTGSKLYSIDLNGRNETLINTP 434
               RL L    + ++  WS  G+S+   +S     DG    ++++      + +L   P
Sbjct: 289 TLSYRLPLSSAPSFRSIAWSADGKSIASVYSSGAGADGPAVIQIWNPFTGKSSTSLTTEP 348

Query: 435 AYA-SDPQWVG 444
            ++ SD  W  
Sbjct: 349 GWSISDISWSP 359


>gi|83765812|dbj|BAE55955.1| unnamed protein product [Aspergillus oryzae]
          Length = 301

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 81/222 (36%), Gaps = 15/222 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VVSG   N++ + D +              +    FSP+ Q VA  +YD+     + L D
Sbjct: 35  VVSGSDDNTIKLWDSNTGQQLRTMRGHSDWVQSVAFSPDGQLVASGSYDN----TIMLWD 90

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T   +  + +    S++ A  FS +G     S   D+ + +++          L     I
Sbjct: 91  TNTGQHLRTLKGHSSLVGAVAFSPDGHMIA-SGSYDKTVKLWNT-KTGQQLRTLEGHSGI 148

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++ PDS  +   S       + +  +    + R  +          +SP   +IA 
Sbjct: 149 VRSVTFLPDSQTVASGSY---DSTIKLWDTTTGLELRTIRGHSGPVRSVSFSPDSPMIAS 205

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSL 404
             +      I +      Q   L    +  +P T+SP  +++
Sbjct: 206 GSYDNT---IKLWDTKTGQH--LRTLGDHSSPVTFSPESQTI 242



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 81/243 (33%), Gaps = 22/243 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +R L    D ++    FSP+ Q V   + D+     + L D+   +  + +      
Sbjct: 10  GKQLRTLDGHSDSVVSV-AFSPDSQLVVSGSDDN----TIKLWDSNTGQQLRTMRGHSDW 64

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + +  FS +G + + S   D  + ++  +        L     +  + ++SPD   I   
Sbjct: 65  VQSVAFSPDG-QLVASGSYDNTIMLWDTN-TGQHLRTLKGHSSLVGAVAFSPDGHMIASG 122

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     + + +  +    Q R  +          + P    +A   +      I +    
Sbjct: 123 SY---DKTVKLWNTKTGQQLRTLEGHSGIVRSVTFLPDSQTVASGSYDST---IKLWDTT 176

Query: 380 GSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              E   +      +++ ++SP    +        D   KL+    + +    + T    
Sbjct: 177 TGLELRTIRGHSGPVRSVSFSPDSPMIASGSY---DNTIKLW----DTKTGQHLRTLGDH 229

Query: 438 SDP 440
           S P
Sbjct: 230 SSP 232



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 69/207 (33%), Gaps = 11/207 (5%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V    ++  +  + +      +++  FS +  + ++S   D  + ++  +        + 
Sbjct: 2   VNSTGSKTGKQLRTLDGHSDSVVSVAFSPD-SQLVVSGSDDNTIKLWDSN-TGQQLRTMR 59

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  S ++SPD   +   S       + +  +N     R  +   +      +SP G
Sbjct: 60  GHSDWVQSVAFSPDGQLVASGSY---DNTIMLWDTNTGQHLRTLKGHSSLVGAVAFSPDG 116

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            +IA   +  +   +    K G Q R L      +++ T+ P  +++        D+  K
Sbjct: 117 HMIASGSYD-KTVKLW-NTKTGQQLRTLEGHSGIVRSVTFLPDSQTVASGSY---DSTIK 171

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           L+         T+           +  
Sbjct: 172 LWDTTTGLELRTIRGHSGPVRSVSFSP 198



 Score = 46.2 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 59/201 (29%), Gaps = 40/201 (19%)

Query: 120 GKDRLRVEFRLWDVKDRK---QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                     LWD    +    + G        ++    H I+                 
Sbjct: 78  ASGSYDNTIMLWDTNTGQHLRTLKGHSSLVGAVAFSPDGHMIA----------------- 120

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                    SG    ++ + +               I+    F P+ Q VA  +YD    
Sbjct: 121 ---------SGSYDKTVKLWNTKTGQQLRTLEGHSGIVRSVTFLPDSQTVASGSYDS--- 168

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L DT      + I      + +  FS +      S   D  + ++  D ++    R
Sbjct: 169 -TIKLWDTTTGLELRTIRGHSGPVRSVSFSPDSPMIA-SGSYDNTIKLW--DTKTGQHLR 224

Query: 297 LTNTLFINISA-SYSPDSSQI 316
              TL  + S  ++SP+S  I
Sbjct: 225 ---TLGDHSSPVTFSPESQTI 242


>gi|332969102|gb|EGK08140.1| S9A/B/C family peptidase [Desmospora sp. 8437]
          Length = 466

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 86/243 (35%), Gaps = 17/243 (6%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-- 261
             L    D   +  RFSP+ +K+ + +    ++     +        + +   +   L  
Sbjct: 11  HRLLHQSDHTNYAGRFSPDGKKILF-SRVYSNMDNDLHLLDLDTGNTRLLTPRKGQTLFT 69

Query: 262 APRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
             RFS +G    + S ++ E   +  + L +     LT   +     S SPD   + F  
Sbjct: 70  GARFSPDGDTLFLLSNRESEFTRVARIHLDTLDWTWLTEDRWDAEDLSLSPDGGLLAFTQ 129

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKD 379
           +  G  +L V+ +  S   ++ +  +       W+ +G+ +A T  S      I  ++ +
Sbjct: 130 NEGGNSRLKVLNAESSRSLKLPELPQGVILGTTWNRRGNRLALTLSSPRHGTEIWQIQPE 189

Query: 380 GSQERLLVEDSNLQAP---TWSP--------SGRSL-IFSRKKDGDTGSKLYSIDLNGRN 427
             Q   +   S    P     SP         G  +  F  +  G  G     + ++G  
Sbjct: 190 EPQPERITYASISGVPQDTFISPEEVTYPSFDGLEIPAFYYRPPGHKGPHPVIVWVHGGP 249

Query: 428 ETL 430
           E+ 
Sbjct: 250 ESQ 252



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 62/139 (44%), Gaps = 4/139 (2%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRIS 342
           +Y  +L++++   L  +   N +  +SPD  +I+F          L+++  +  + + ++
Sbjct: 1   MYLYELETDSHRLLHQSDHTNYAGRFSPDGKKILFSRVYSNMDNDLHLLDLDTGNTRLLT 60

Query: 343 QDKEASYFDPV-WSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVED-SNLQAPTWSP 399
             K  + F    +SP GD +        +F  +  +  D      L ED  + +  + SP
Sbjct: 61  PRKGQTLFTGARFSPDGDTLFLLSNRESEFTRVARIHLDTLDWTWLTEDRWDAEDLSLSP 120

Query: 400 SGRSLIFSRKKDGDTGSKL 418
            G  L F++ + G++  K+
Sbjct: 121 DGGLLAFTQNEGGNSRLKV 139



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 46/108 (42%), Gaps = 5/108 (4%)

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLV---EDSN 391
           +D  R+    + + +   +SP G  I F++ +S     + ++  D    RLL      + 
Sbjct: 8   TDSHRLLHQSDHTNYAGRFSPDGKKILFSRVYSNMDNDLHLLDLDTGNTRLLTPRKGQTL 67

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                +SP G +L     ++ +  +++  I L+  + T +    + ++
Sbjct: 68  FTGARFSPDGDTLFLLSNRESEF-TRVARIHLDTLDWTWLTEDRWDAE 114


>gi|288924144|ref|ZP_06418190.1| WD-40 repeat protein [Frankia sp. EUN1f]
 gi|288344511|gb|EFC78994.1| WD-40 repeat protein [Frankia sp. EUN1f]
          Length = 1224

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 97/308 (31%), Gaps = 44/308 (14%)

Query: 112  VTGRVIKEGKDRL-----RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            V G V      R+         R+WD    ++++               H   D++    
Sbjct: 926  VNGGVWSPDGSRILTASEDGSARVWDGVSGQELLA-----------FAGHG--DEVN--- 969

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                G ++   L V  +   G+ +    V D        +    D  +++  +SP+  +V
Sbjct: 970  ---GGAWSPDGLRVLTAGGDGVAR----VWDAVSGQELLILSGHDGRVWDVAWSPDGSRV 1022

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
              A  D        + D    +    +      +    +S +G R  ++V  D +  ++ 
Sbjct: 1023 LTAGADG----SARMWDAVSGQELLILSGHDGRVWDVAWSPDGSR-FLTVGADGSARVW- 1076

Query: 287  VDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             D  S     +       + S  +S D  +++      G     V  +    +       
Sbjct: 1077 -DGVSGQKLLIFAGHGDGVNSGVWSSDGLRVL---TAGGDGVARVWDAVSGQELLTFAGH 1132

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRS 403
                +D  WSP G  +     +G      V      QE L++   D  +    WSP G  
Sbjct: 1133 SGRVWDAAWSPDGLRVL---TAGADGVARVWDAVSGQELLILSGHDGPVWDVAWSPDGSR 1189

Query: 404  LIFSRKKD 411
            ++ +    
Sbjct: 1190 ILTTGDDG 1197



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 72/240 (30%), Gaps = 17/240 (7%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                   +    +SP+  ++  A+ D        + D    +           +    +S
Sbjct: 919  FTGHRGWVNGGVWSPDGSRILTASEDG----SARVWDGVSGQELLAFAGHGDEVNGGAWS 974

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             +G R L +   D    ++   +       L+         ++SPD S+ V  +  +G  
Sbjct: 975  PDGLRVL-TAGGDGVARVWDA-VSGQELLILSGHDGRVWDVAWSPDGSR-VLTAGADGSA 1031

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +++   +    +  I    +   +D  WSP G         G      V      Q+ L+
Sbjct: 1032 RMW--DAVSGQELLILSGHDGRVWDVAWSPDGSRFLTVGADGSA---RVWDGVSGQKLLI 1086

Query: 387  VEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                     +  WS  G  ++      GD  ++++         T         D  W  
Sbjct: 1087 FAGHGDGVNSGVWSSDGLRVL---TAGGDGVARVWDAVSGQELLTFAGHSGRVWDAAWSP 1143


>gi|167623183|ref|YP_001673477.1| peptidase S41 [Shewanella halifaxensis HAW-EB4]
 gi|167353205|gb|ABZ75818.1| peptidase S41 [Shewanella halifaxensis HAW-EB4]
          Length = 1092

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 52/311 (16%), Positives = 121/311 (38%), Gaps = 40/311 (12%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
             +Q    +   + SR+ F+S+S  +      +  M  DG++I+  T  ++  +   R  
Sbjct: 214 QSHQGSVRQPMLWQSRLYFISDSDGNDN----IWSMATDGSDIKQHTHYKEWQVRTARL- 268

Query: 221 PNQQKVAY----------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            NQ ++ +              +E  L + L+     +    +        +   +  G 
Sbjct: 269 -NQGRIVFQQGADIKLFEIDSGEEQTLDIELISDFAQKREHWVKEPMKYATSTLLAPMGD 327

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTL----FINISASYSPDSSQIVFESDREGKE 326
           R +I+ +         V +     +RL            SA  S D + I   SD  G++
Sbjct: 328 RVVITARSH-------VAIAGTDGQRLVEIALPKHSRVRSAVMSQDGAWIYGISDASGEQ 380

Query: 327 QLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +++   ++GS + K++++D ++   +   SP G  +A   + G  + + +  K GS +++
Sbjct: 381 EVWQFAADGSDNAKQLTKDGKSLRLNLHLSPDGRYLAHDDYDGNVWLLDL--KKGSDKKI 438

Query: 386 LVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPA 435
           + +           WS   R +  ++ + G    ++    L       +        +P+
Sbjct: 439 ITQGEGLGPYGDIVWSGDSRFIALTKAEIGKARPQIVLYSLKKDRSGSLTSEKYESFSPS 498

Query: 436 YASDPQWVGFM 446
           +++D  W+ F+
Sbjct: 499 FSADGDWLYFL 509



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 73/200 (36%), Gaps = 17/200 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P   +V            V +  T   R  +      S + +   S +G          
Sbjct: 323 APMGDRVVITARSH-----VAIAGTDGQRLVEIALPKHSRVRSAVMSQDGAWIYGISDAS 377

Query: 280 EAMDIYSVDLQSN-ATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GS 336
              +++      +   ++LT +   + ++   SPD   +    D +G   ++++    GS
Sbjct: 378 GEQEVWQFAADGSDNAKQLTKDGKSLRLNLHLSPDGRYLA-HDDYDGN--VWLLDLKKGS 434

Query: 337 DQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQERLLVEDSN 391
           D+K I+Q      Y D VWS     IA TK    K      +  +KKD S   L  E   
Sbjct: 435 DKKIITQGEGLGPYGDIVWSGDSRFIALTKAEIGKARPQIVLYSLKKDRSGS-LTSEKYE 493

Query: 392 LQAPTWSPSGRSLIFSRKKD 411
             +P++S  G  L F   + 
Sbjct: 494 SFSPSFSADGDWLYFLSNRQ 513



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 71/204 (34%), Gaps = 26/204 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                AP  +   +  + + + D    +++  L  +   RLT+       AS S D   +
Sbjct: 31  PGYFRAPALAE--QTLVFTAEGD----LWTQSLGDSQATRLTSLPAQEFGASISKDGKYV 84

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            + ++ EG  ++YV+   G   KR+S +  +      W+  G ++  T  +       V+
Sbjct: 85  AYIANYEGSSEVYVIPIAGGQAKRVSFE-NSRVRVQGWTADGKVLYSTDNAFGPANYWVL 143

Query: 377 KKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRK-----------KDGDTGSKLYSID 422
           +     E L+  D   ++         G  + F+R              G    +L+   
Sbjct: 144 RTV-DPETLITADLPLADAIEGAIDDKGEYVYFTRFGLQTTGDNAKVYRGGAKGELWKFK 202

Query: 423 LNGRNETLINT---PAYASDPQ-W 442
           L  + E +  T         P  W
Sbjct: 203 LGSKQEAMPLTQSHQGSVRQPMLW 226



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 65/202 (32%), Gaps = 22/202 (10%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              +  D    R+ +  +       S +GK        + + ++Y + +     +R++  
Sbjct: 53  WTQSLGDSQATRLTSLPAQEFGASISKDGKYVAYIANYEGSSEVYVIPIAGGQAKRVSFE 112

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   ++ D   +    +  G    +V+++   +    +    A   +     +G+ 
Sbjct: 113 NSRVRVQGWTADGKVLYSTDNAFGPANYWVLRTVDPETLITADLPLADAIEGAIDDKGEY 172

Query: 361 IAFTK-------------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRS 403
           + FT+               G K  +   K    QE + +  S+  +      W      
Sbjct: 173 VYFTRFGLQTTGDNAKVYRGGAKGELWKFKLGSKQEAMPLTQSHQGSVRQPMLWQ---SR 229

Query: 404 LIFSRKKDGDTGSKLYSIDLNG 425
           L F    DG     ++S+  +G
Sbjct: 230 LYFISDSDG--NDNIWSMATDG 249



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 13/146 (8%)

Query: 185 VSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                +  +     DG+ N + LT     +      SP+ + +A+  YD      V+L+D
Sbjct: 374 SDASGEQEVWQFAADGSDNAKQLTKDGKSLRLNLHLSPDGRYLAHDDYDG----NVWLLD 429

Query: 244 TRIDRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDE--AMDIYSVDLQSNATERL 297
            +     K I       L P     +S + +   ++  +       I    L+ + +  L
Sbjct: 430 LKKGSDKKIITQGEG--LGPYGDIVWSGDSRFIALTKAEIGKARPQIVLYSLKKDRSGSL 487

Query: 298 TNTLFINISASYSPDSSQIVFESDRE 323
           T+  + + S S+S D   + F S+R+
Sbjct: 488 TSEKYESFSPSFSADGDWLYFLSNRQ 513


>gi|24374921|ref|NP_718964.1| protease, putative [Shewanella oneidensis MR-1]
 gi|24349630|gb|AAN56408.1|AE015777_3 protease, putative [Shewanella oneidensis MR-1]
          Length = 1094

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 114/307 (37%), Gaps = 36/307 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +Q    +   +  R+ F+S+S  +      L  M  DG++ + LT  +D  +   R   +
Sbjct: 216 HQGSVRQPMLWQDRLYFISDSDGNDN----LWSMALDGSDAKQLTQYKDWQMRGARM--D 269

Query: 223 QQKVAY----------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           Q  V +               + +L + L+     R    + +      +   +  G + 
Sbjct: 270 QGNVVFQLGADIHVFDIASAKDSLLNIELISDFAQRREHWVKDPMDYATSANLALAGDKV 329

Query: 273 LISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           +I+ +      +    +  +   ++     +   +A  S D   +   SD  G+++++  
Sbjct: 330 VITAR----SHVAITGIDGSRLVQVALPGTYRVRNAILSQDGKSVYAISDMTGQQEIWQF 385

Query: 332 QSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            ++G S  K++++D          S  G  +A     G    + ++    +  + ++ + 
Sbjct: 386 PADGTSGAKQLTKDGHTLRMSLSLSNDGRYLAHDDNDGS---VWLLDLKKNTNQKIISNG 442

Query: 391 NLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASD 439
               P     WS   R +  ++ + G   S++    ++      +        +P ++SD
Sbjct: 443 EGLGPYADIRWSGDSRFIALTKSEIGKQRSQVVLYSVDENKAQALTSDKYESYSPTFSSD 502

Query: 440 PQWVGFM 446
            QW+ F+
Sbjct: 503 GQWLYFL 509



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 61/160 (38%), Gaps = 10/160 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLT-NTLFINISASYSPDSSQIVFESDR 322
            S +GK            +I+       +  ++LT +   + +S S S D   +    D 
Sbjct: 363 LSQDGKSVYAISDMTGQQEIWQFPADGTSGAKQLTKDGHTLRMSLSLSNDGRYLA-HDDN 421

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKK 378
           +G   ++++    +  ++I  + E    Y D  WS     IA TK     ++  + +   
Sbjct: 422 DGS--VWLLDLKKNTNQKIISNGEGLGPYADIRWSGDSRFIALTKSEIGKQRSQVVLYSV 479

Query: 379 DGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           D ++ + L  D     +PT+S  G+ L F   +       
Sbjct: 480 DENKAQALTSDKYESYSPTFSSDGQWLYFLSNRQFTATPS 519



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 79/213 (37%), Gaps = 34/213 (15%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +  + +    AP      +  + + + D    +++  L   A  RLT      + A+ S 
Sbjct: 26  QSTSNQGYYRAPALHD--QTLVFTAEGD----LWTQTLGQKAATRLTTLPAEELGAAISA 79

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--- 368
           D   + + ++ EG  ++YV+   G   KR+S +  +      W+ +G+ + ++  +G   
Sbjct: 80  DGKWVAYVANYEGASEVYVIPVTGGVAKRVSFE-NSRVRVQGWTSKGE-VLYSTDAGFGP 137

Query: 369 -EKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRK-----------KDGD 413
              + + ++  +     L   D   ++        + + + F+R              G 
Sbjct: 138 ANNWMLRLVNPES----LTTTDLPLADAVEGVIDANHQYVYFTRFGLQVTGDNAKVYRGG 193

Query: 414 TGSKLYSIDLNGRNETLINTP---AYASDPQ-W 442
              +L+   L G++E  + +         P  W
Sbjct: 194 AKGELWRFKLGGKDEAQLLSGQHQGSVRQPMLW 226



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 107/295 (36%), Gaps = 39/295 (13%)

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL------WDVKDRK-Q 138
           S     ++   + +++DW   GA++           D+  V F+L      +D+   K  
Sbjct: 244 SMALDGSDAKQLTQYKDWQMRGARM-----------DQGNVVFQLGADIHVFDIASAKDS 292

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++  +  S  A  R+            +        S  L ++   V    ++ + +   
Sbjct: 293 LLNIELISDFAQRRE----------HWVKDPMDYATSANLALAGDKVVITARSHVAITGI 342

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFR 257
           DG+ +  +       +     S + + V YA  D      ++          K++  +  
Sbjct: 343 DGSRLVQVALPGTYRVRNAILSQDGKSV-YAISDMTGQQEIWQFPADGTSGAKQLTKDGH 401

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSS 314
           ++ ++   S++G+        D    ++ +DL+ N  +++ +    L       +S DS 
Sbjct: 402 TLRMSLSLSNDGRYLA---HDDNDGSVWLLDLKKNTNQKIISNGEGLGPYADIRWSGDSR 458

Query: 315 QIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            I       GK+  Q+ +   + +  + ++ DK  SY  P +S  G  + F    
Sbjct: 459 FIALTKSEIGKQRSQVVLYSVDENKAQALTSDKYESY-SPTFSSDGQWLYFLSNR 512



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 71/209 (33%), Gaps = 22/209 (10%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              T   +A  R+    +  L    S++GK        + A ++Y + +     +R++  
Sbjct: 53  WTQTLGQKAATRLTTLPAEELGAAISADGKWVAYVANYEGASEVYVIPVTGGVAKRVSFE 112

Query: 301 LFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                   ++    ++++ +D   G    ++++    +    +    A   + V      
Sbjct: 113 NSRVRVQGWTSKG-EVLYSTDAGFGPANNWMLRLVNPESLTTTDLPLADAVEGVIDANHQ 171

Query: 360 LIAFTKF-------------SGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRS 403
            + FT+F              G K  +   K  G  E  L+      +++ P        
Sbjct: 172 YVYFTRFGLQVTGDNAKVYRGGAKGELWRFKLGGKDEAQLLSGQHQGSVRQPMLWQD--R 229

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           L F    DG     L+S+ L+G +   + 
Sbjct: 230 LYFISDSDG--NDNLWSMALDGSDAKQLT 256



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 67/207 (32%), Gaps = 25/207 (12%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G        +          S + + VAY   + E    VY++        KR+    S 
Sbjct: 58  GQKAATRLTTLPAEELGAAISADGKWVAYVA-NYEGASEVYVIPV-TGGVAKRVSFENSR 115

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQI 316
           +    ++S G   L S           + L+    E LT T   L   +      +   +
Sbjct: 116 VRVQGWTSKG-EVLYSTDAGFGPANNWM-LRLVNPESLTTTDLPLADAVEGVIDANHQYV 173

Query: 317 VFES------------DREG-KEQLYVMQSNGSDQKRI-SQDKEASYFDPV-WSPQGDLI 361
            F               R G K +L+  +  G D+ ++ S   + S   P+ W    D +
Sbjct: 174 YFTRFGLQVTGDNAKVYRGGAKGELWRFKLGGKDEAQLLSGQHQGSVRQPMLWQ---DRL 230

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE 388
            F   S     +  M  DGS  + L +
Sbjct: 231 YFISDSDGNDNLWSMALDGSDAKQLTQ 257



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 275 SVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +     +++   L      +L                D  ++ F SD +G + L+ M 
Sbjct: 189 VYRGGAKGELWRFKLGGKDEAQLLSGQHQGSVRQPMLWQD--RLYFISDSDGNDNLWSMA 246

Query: 333 SNGSDQKRISQDKEA 347
            +GSD K+++Q K+ 
Sbjct: 247 LDGSDAKQLTQYKDW 261


>gi|153873027|ref|ZP_02001748.1| WD40-like Beta Propeller [Beggiatoa sp. PS]
 gi|152070507|gb|EDN68252.1| WD40-like Beta Propeller [Beggiatoa sp. PS]
          Length = 580

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 55/303 (18%), Positives = 103/303 (33%), Gaps = 66/303 (21%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSR-----DQILFEPRFSPNQQKVAYATY-------DD 233
             +    + V DR+    + ++ S      +    EP  S + + +A+ +Y       D 
Sbjct: 171 DNLKTTDIFVYDRETKATQIVSVSNKGKQGNSTSSEPDISADGRYIAFHSYATNLVSKDS 230

Query: 234 EDILRVYLMDTRIDRAPKRIGNF-----RSMILAPRFSSNGKRALISVQ--------KDE 280
            + + V+L D       +          +    +   S++G     + +        K++
Sbjct: 231 NNRVDVFLHDLETGETIRVSIKGNSVQAKGASFSAAISADGSYIAFTSEATNLVTDDKNQ 290

Query: 281 AMDIYSVDLQSNATERLT------NTLFINISASYSPDSSQIVFES--------DREGKE 326
             DI   D ++  T R++           +  AS S D   I F S        D  G E
Sbjct: 291 KTDILVRDWKNKETVRISINNNGEEGDGDSFDASMSADGRYIAFGSRATNLVTNDNNGVE 350

Query: 327 QLYVMQSNGSDQKRIS-----QDKEASYFDPVWSPQGDLIAFTK--------FSGEKFAI 373
            ++V      +  R+S     Q  E++ F P  S  G  + F             E   +
Sbjct: 351 DIFVHDRQMGETSRVSINSQGQQAESASFSPTLSTDGRYVVFNSEADNLVDDDDNETTDV 410

Query: 374 GVMKKDGSQERLLVEDSNLQA----PTWSP----SGRSLIFSRK------KDGDTGSKLY 419
            +  +   Q R L   S   A     ++SP    +GR ++F  +       D +  S ++
Sbjct: 411 FIHDRQTGQTRRLSLASQFYADSSAASYSPAISENGRWVVFESRAWNLASNDFNEASDIF 470

Query: 420 SID 422
             D
Sbjct: 471 LYD 473



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 103/313 (32%), Gaps = 75/313 (23%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDE--------DILRVYLMDTRIDRAPKRIGNFRS- 258
              + + F P  S N + V + +                +++ D           + +  
Sbjct: 139 NEGNFVSFFPNLSANGRYVTFQSDASNLVPNDDNLKTTDIFVYDRETKATQIVSVSNKGK 198

Query: 259 ----MILAPRFSSNGKRALI--------SVQKDEAMDIYSVDLQSNATERLT------NT 300
                   P  S++G+            S   +  +D++  DL++  T R++        
Sbjct: 199 QGNSTSSEPDISADGRYIAFHSYATNLVSKDSNNRVDVFLHDLETGETIRVSIKGNSVQA 258

Query: 301 LFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRIS-----QDKEA 347
              + SA+ S D S I F S        D+  K  + V      +  RIS     ++ + 
Sbjct: 259 KGASFSAAISADGSYIAFTSEATNLVTDDKNQKTDILVRDWKNKETVRISINNNGEEGDG 318

Query: 348 SYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKK---DGSQERLLVEDSNLQAPT 396
             FD   S  G  IAF           +     I V  +   + S+  +  +    ++ +
Sbjct: 319 DSFDASMSADGRYIAFGSRATNLVTNDNNGVEDIFVHDRQMGETSRVSINSQGQQAESAS 378

Query: 397 WSP----SGRSLIFSR------KKDGDTGSKLYSIDLNGRNETLIN-------------- 432
           +SP     GR ++F+         D +  + ++  D        ++              
Sbjct: 379 FSPTLSTDGRYVVFNSEADNLVDDDDNETTDVFIHDRQTGQTRRLSLASQFYADSSAASY 438

Query: 433 TPAYASDPQWVGF 445
           +PA + + +WV F
Sbjct: 439 SPAISENGRWVVF 451



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 82/272 (30%), Gaps = 60/272 (22%)

Query: 209 SRDQILFEPRFSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIGNFRSM-- 259
           + +     P  S + + +A+ +        D+     +++ D  + +  +   N      
Sbjct: 82  NGNSHSQAPALSADGRYIAFHSDANNLVPNDNNGFADIFVYDRILKQINRISVNSEGNEG 141

Query: 260 ---ILAPRFSSNGKRALISVQKDE---------AMDIYSVDLQSNATERLT------NTL 301
                 P  S+NG+                     DI+  D ++ AT+ ++         
Sbjct: 142 NFVSFFPNLSANGRYVTFQSDASNLVPNDDNLKTTDIFVYDRETKATQIVSVSNKGKQGN 201

Query: 302 FINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQDKE-----AS 348
             +     S D   I F S        D   +  +++      +  R+S          +
Sbjct: 202 STSSEPDISADGRYIAFHSYATNLVSKDSNNRVDVFLHDLETGETIRVSIKGNSVQAKGA 261

Query: 349 YFDPVWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLV-------EDSNLQ 393
            F    S  G  IAFT  +         +K  I V      +   +         D +  
Sbjct: 262 SFSAAISADGSYIAFTSEATNLVTDDKNQKTDILVRDWKNKETVRISINNNGEEGDGDSF 321

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             + S  GR + F     G   + L + D NG
Sbjct: 322 DASMSADGRYIAF-----GSRATNLVTNDNNG 348



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 58/336 (17%), Positives = 122/336 (36%), Gaps = 65/336 (19%)

Query: 37  KVATNSANYSPVSIAFTKFVSIDE----LGGKVSEVVSKD--LQRSDVF---------NL 81
           +++ NS       ++F   +S +          S +V  D  L+ +D+F          +
Sbjct: 131 RISVNSEGNEGNFVSFFPNLSANGRYVTFQSDASNLVPNDDNLKTTDIFVYDRETKATQI 190

Query: 82  ISQDSFKQKITNPDSIPRF-QDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
           +S  +  ++  +  S P    D   +      T  V K+  +R+ V   L D++  + I 
Sbjct: 191 VSVSNKGKQGNSTSSEPDISADGRYIAFHSYATNLVSKDSNNRVDV--FLHDLETGETIR 248

Query: 141 G--KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
              K            A   +D  Y + T E           + ++V+        ++ R
Sbjct: 249 VSIKGNSVQAKGASFSAAISADGSYIAFTSE-----------ATNLVTDDKNQKTDILVR 297

Query: 199 DGANIRYLTPS-------RDQILFEPRFSPNQQKVAY-------ATYDDEDILRVYLMDT 244
           D  N   +  S        D   F+   S + + +A+        T D+  +  +++ D 
Sbjct: 298 DWKNKETVRISINNNGEEGDGDSFDASMSADGRYIAFGSRATNLVTNDNNGVEDIFVHDR 357

Query: 245 RIDRAPKRIGNFRSMI-----LAPRFSSNGKRALISVQKD--------EAMDIYSVDLQS 291
           ++    +   N +         +P  S++G+  + + + D        E  D++  D Q+
Sbjct: 358 QMGETSRVSINSQGQQAESASFSPTLSTDGRYVVFNSEADNLVDDDDNETTDVFIHDRQT 417

Query: 292 NATERLT-------NTLFINISASYSPDSSQIVFES 320
             T RL+       ++   + S + S +   +VFES
Sbjct: 418 GQTRRLSLASQFYADSSAASYSPAISENGRWVVFES 453


>gi|158333400|ref|YP_001514572.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158303641|gb|ABW25258.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1191

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/312 (17%), Positives = 96/312 (30%), Gaps = 46/312 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G  +  G     +  +LWDV     +                HT+            G F
Sbjct: 784  GSSLVSGSGDQTI--KLWDVNQGHCL----------------HTL-------TGHHHGIF 818

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                      VVSG +  ++ + D D  N   +       +F    SP+ Q +A  ++D 
Sbjct: 819  AIAFHPNEHLVVSGSLDQTVRLWDVDTGNCLKVLTGYTNRIFAVACSPDGQTIASGSFDQ 878

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + L D +     + +      I +  FS NG   L S   D A+ ++        
Sbjct: 879  ----SIRLWDRKEGSLLRSLKGHHQPIYSLAFSPNG-EILASGGGDYAIKLWHY-HSGQC 932

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFD 351
               LT         +YSPD + +V      G     + V   N           +   + 
Sbjct: 933  ISALTGHRGWIYGLAYSPDGNWLV-----SGASDHVIKVWSLNSEACTMTLMGHQTWIWS 987

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRK 409
               SP    IA          I +      +    ++    +  +  +SP G+ ++    
Sbjct: 988  VAVSPNSQYIA---SGSGDRTIRLWDLQTGENIHTLKGHKDRVFSVAFSPDGQLVV---S 1041

Query: 410  KDGDTGSKLYSI 421
               D   K++ +
Sbjct: 1042 GSFDHTIKIWDV 1053



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 89/265 (33%), Gaps = 21/265 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + S    +++ + D D   +          +    FSP+   +   + D      + 
Sbjct: 742 TQRLASCSTDSTIKLWDGDSGELLQTLRGHRNWVNSLAFSPDGSSLVSGSGDQ----TIK 797

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L D         +      I A  F  N +  ++S   D+ + ++ VD   N  + LT  
Sbjct: 798 LWDVNQGHCLHTLTGHHHGIFAIAFHPN-EHLVVSGSLDQTVRLWDVD-TGNCLKVLTGY 855

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                + + SPD   I   S     + + +         R  +      +   +SP G++
Sbjct: 856 TNRIFAVACSPDGQTIASGSF---DQSIRLWDRKEGSLLRSLKGHHQPIYSLAFSPNGEI 912

Query: 361 IAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A     G  +AI +      Q    L      +    +SP G  L+       D   K+
Sbjct: 913 LA---SGGGDYAIKLWHYHSGQCISALTGHRGWIYGLAYSPDGNWLV---SGASDHVIKV 966

Query: 419 YSIDLNGRNETLINTPAYASDPQWV 443
           +S++      TL+    +     W 
Sbjct: 967 WSLNSEACTMTLMGHQTWI----WS 987



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 80/243 (32%), Gaps = 26/243 (10%)

Query: 191 NSLCVMDRD---------GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             L + D+D              ++       +    FSP+ Q +A A+ D      + L
Sbjct: 575 RYLAIADQDCKVRVWCAHTYQQLWVGHEHQNAVLSVSFSPDNQTLASASADH----TLKL 630

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +              S + A  FS +G+    S  +D  + I+ V+      + L    
Sbjct: 631 WNAEAGNCLYTFHGHDSEVCAVAFSPDGQLLA-SGSRDTTLKIWEVN-DYTCLQTLAGHQ 688

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               + ++SPD+S+I   S     + + +   +    +              + PQ   +
Sbjct: 689 QAIFTVAFSPDNSRIASGSS---DKTIKLWDVDEGTCQHTLHGHNNWIMSVAFCPQTQRL 745

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLY 419
           A          I +   D  +    +        +  +SP G SL+      GD   KL+
Sbjct: 746 ASCSTDST---IKLWDGDSGELLQTLRGHRNWVNSLAFSPDGSSLV---SGSGDQTIKLW 799

Query: 420 SID 422
            ++
Sbjct: 800 DVN 802



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/242 (13%), Positives = 83/242 (34%), Gaps = 13/242 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ S    ++L + + +  N  Y     D  +    FSP+ Q +A  + D      + +
Sbjct: 617 QTLASASADHTLKLWNAEAGNCLYTFHGHDSEVCAVAFSPDGQLLASGSRDT----TLKI 672

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +       + +   +  I    FS +  R   S   D+ + ++ VD +      L    
Sbjct: 673 WEVNDYTCLQTLAGHQQAIFTVAFSPDNSRIA-SGSSDKTIKLWDVD-EGTCQHTLHGHN 730

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              +S ++ P + ++   S       + +   +  +  +  +          +SP G  +
Sbjct: 731 NWIMSVAFCPQTQRLASCST---DSTIKLWDGDSGELLQTLRGHRNWVNSLAFSPDGSSL 787

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +    +   +  + +      L      + A  + P+   ++       D   +L+ +
Sbjct: 788 V-SGSGDQTIKLWDVNQGHCLHTLTGHHHGIFAIAFHPNEHLVV---SGSLDQTVRLWDV 843

Query: 422 DL 423
           D 
Sbjct: 844 DT 845



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 52/123 (42%), Gaps = 7/123 (5%)

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +  +   ++  +   S+ + SG    ++ + D + G NI  L   +D++     FSP+ Q
Sbjct: 979  MGHQTWIWSVAVSPNSQYIASGSGDRTIRLWDLQTGENIHTLKGHKDRVFSV-AFSPDGQ 1037

Query: 225  KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
             V   ++D      + + D +  +  + +    + I    FS  GK    S   D+ + +
Sbjct: 1038 LVVSGSFDH----TIKIWDVQTGQCLQTLTGHTNGIYTVAFSPEGKTLA-SGSLDQTIKL 1092

Query: 285  YSV 287
            + +
Sbjct: 1093 WEL 1095



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 50/163 (30%), Gaps = 13/163 (7%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFE 319
           A  FS +G+   I+ Q  +              +        N   S S+SPD+  +   
Sbjct: 567 AVAFSPDGRYLAIADQDCKVRVWC----AHTYQQLWVGHEHQNAVLSVSFSPDNQTLASA 622

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S       L +  +   +        ++      +SP G L+A +        I  +   
Sbjct: 623 S---ADHTLKLWNAEAGNCLYTFHGHDSEVCAVAFSPDGQLLA-SGSRDTTLKIWEVNDY 678

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L      +    +SP    +        D   KL+ +D
Sbjct: 679 TCLQTLAGHQQAIFTVAFSPDNSRIA---SGSSDKTIKLWDVD 718


>gi|159030307|emb|CAO91202.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 170

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 4/125 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           N+   +   SYS D   + F SDR G+  +Y+          +      ++S   P  + 
Sbjct: 42  NSFAPDQFPSYSADGRYLAFASDRSGRRSIYLFDLQEKRLVNLPNLNRGDSSQDQPSLNA 101

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G LIA+      K  + V  +  S+  LL  +   +++ PT S  GR + F   +DG  
Sbjct: 102 DGRLIAYISSERGKSDVMVYDRSRSRTTLLTANLRGSVRNPTISGDGRQIAFETNQDGQW 161

Query: 415 GSKLY 419
              + 
Sbjct: 162 NIAIV 166



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 3/118 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFE 319
           P +S++G+    +  +     IY  DLQ      L N           S + D   I + 
Sbjct: 50  PSYSADGRYLAFASDRSGRRSIYLFDLQEKRLVNLPNLNRGDSSQDQPSLNADGRLIAYI 109

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           S   GK  + V   + S    ++ +   S  +P  S  G  IAF      ++ I ++ 
Sbjct: 110 SSERGKSDVMVYDRSRSRTTLLTANLRGSVRNPTISGDGRQIAFETNQDGQWNIAIVN 167



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 53/127 (41%), Gaps = 12/127 (9%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA------PRFS 266
               P +S + + +A+A+ D      +YL D       KR+ N  ++         P  +
Sbjct: 46  PDQFPSYSADGRYLAFAS-DRSGRRSIYLFDL----QEKRLVNLPNLNRGDSSQDQPSLN 100

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGK 325
           ++G+       +    D+   D   + T  LT N      + + S D  QI FE++++G+
Sbjct: 101 ADGRLIAYISSERGKSDVMVYDRSRSRTTLLTANLRGSVRNPTISGDGRQIAFETNQDGQ 160

Query: 326 EQLYVMQ 332
             + ++ 
Sbjct: 161 WNIAIVN 167



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 1/84 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               D    +P  + + + +AY + +      V + D    R      N R  +  P  S
Sbjct: 87  LNRGDSSQDQPSLNADGRLIAYISSERGKS-DVMVYDRSRSRTTLLTANLRGSVRNPTIS 145

Query: 267 SNGKRALISVQKDEAMDIYSVDLQ 290
            +G++      +D   +I  V+ Q
Sbjct: 146 GDGRQIAFETNQDGQWNIAIVNGQ 169



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 34/102 (33%), Gaps = 4/102 (3%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSP 399
           +  A    P +S  G  +AF      + +I +      +   L      DS+   P+ + 
Sbjct: 42  NSFAPDQFPSYSADGRYLAFASDRSGRRSIYLFDLQEKRLVNLPNLNRGDSSQDQPSLNA 101

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            GR + +   + G +   +Y    +       N      +P 
Sbjct: 102 DGRLIAYISSERGKSDVMVYDRSRSRTTLLTANLRGSVRNPT 143


>gi|119512022|ref|ZP_01631117.1| Serine/Threonine protein kinase with WD40 repeats [Nodularia
           spumigena CCY9414]
 gi|119463312|gb|EAW44254.1| Serine/Threonine protein kinase with WD40 repeats [Nodularia
           spumigena CCY9414]
          Length = 511

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 83/259 (32%), Gaps = 13/259 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++ SG    ++ + +                +     SP+ + +A  + D+     + L
Sbjct: 246 RTLASGSNDKTIKLWNLQTQGEIATLTGHSDWVSSVAISPDGRTLASGSSDN----TIKL 301

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            + +  +           + +   S +G+    S   D  + ++++  Q       T   
Sbjct: 302 WNLQTQQQIATFTGHSEGVSSVAISPDGRTLA-SGSSDNTIKLWNLQTQQQIAT-FTGHS 359

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S + SPD   +   SD    + + +       +         +      SP G  +
Sbjct: 360 EWVWSVAISPDGRTLASGSD---DKTIKLWNLQTQGEIATLTGHSQAVRSVAISPDGRTL 416

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A +    +   +  ++  G    L     ++ +   SP GR+L       GD   KL+++
Sbjct: 417 A-SGSDDKTIKLWNLQTQGEIATLTRHSESVLSVAISPDGRTLA---SGSGDWTIKLWNL 472

Query: 422 DLNGRNETLINTPAYASDP 440
              G   T       A  P
Sbjct: 473 QTQGEIATFTGHSYVAISP 491



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 71/226 (31%), Gaps = 13/226 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +     SP+ + +A  + D      + L + +       +      + +   
Sbjct: 228 TLTGHSEGVRSVAISPDGRTLASGSNDK----TIKLWNLQTQGEIATLTGHSDWVSSVAI 283

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G+    S   D  + ++++  Q       T       S + SPD   +   S     
Sbjct: 284 SPDGRTLA-SGSSDNTIKLWNLQTQQQIAT-FTGHSEGVSSVAISPDGRTLASGSS---D 338

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +       Q           +    SP G  +A +    +   +  ++  G    L
Sbjct: 339 NTIKLWNLQTQQQIATFTGHSEWVWSVAISPDGRTLA-SGSDDKTIKLWNLQTQGEIATL 397

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
                 +++   SP GR+L        D   KL+++   G   TL 
Sbjct: 398 TGHSQAVRSVAISPDGRTLASGSD---DKTIKLWNLQTQGEIATLT 440



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 98/313 (31%), Gaps = 44/313 (14%)

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTG------RVIKEGKDRLRVE------FRLWDVKD 135
            +KI N +SI     W +      +TG       V      R           +LW+++ 
Sbjct: 205 IEKIPNLESIAAVVPWGNPTLGATLTGHSEGVRSVAISPDGRTLASGSNDKTIKLWNLQT 264

Query: 136 RKQIIGK-------KFFSSPASWRKIAHTISD------------DIYQSITGEKGDFNSR 176
           + +I             +     R +A   SD             I       +G  +  
Sbjct: 265 QGEIATLTGHSDWVSSVAISPDGRTLASGSSDNTIKLWNLQTQQQIATFTGHSEGVSSVA 324

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I     ++ SG   N++ + +              + ++    SP+ + +A  + D    
Sbjct: 325 ISPDGRTLASGSSDNTIKLWNLQTQQQIATFTGHSEWVWSVAISPDGRTLASGSDDK--- 381

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L + +       +      + +   S +G+    S   D+ + ++++  Q      
Sbjct: 382 -TIKLWNLQTQGEIATLTGHSQAVRSVAISPDGRTLA-SGSDDKTIKLWNLQTQGEIAT- 438

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT      +S + SPD   +   S   G   + +       +  I+     SY     SP
Sbjct: 439 LTRHSESVLSVAISPDGRTLASGS---GDWTIKLWNLQTQGE--IATFTGHSYV--AISP 491

Query: 357 QGDLIAFTKFSGE 369
            G  +A     G 
Sbjct: 492 DGRTLASGSLDGT 504


>gi|156051526|ref|XP_001591724.1| hypothetical protein SS1G_07170 [Sclerotinia sclerotiorum 1980]
 gi|154704948|gb|EDO04687.1| hypothetical protein SS1G_07170 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 334

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 76/225 (33%), Gaps = 14/225 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V SG    ++ + D                +    FSP+  KVA  ++D      + L 
Sbjct: 33  KVASGSYDQTIRLWDAATGESLQTLEGHLGSVTSVAFSPDGTKVASGSHDK----TIRLW 88

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D     + + +      + +  FS +G +   S   D+ + ++   +   + + L     
Sbjct: 89  DAATGESLQTLEGHSDWVFSVAFSPDGTKVA-SGSLDKTIRLWDA-ITGESLQTLEGHSN 146

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++SPD +++   S     + + +  +   +  +  +          +SP G  +A
Sbjct: 147 RVSSVAFSPDGTKVASGSL---DKTIRLWDAITGESLQTLEGHSNRVSSVAFSPDGTKVA 203

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
                     I +      +    +E     + +  +SP G  + 
Sbjct: 204 SGSDDKT---IRLWDAITGESLQTLEGHSGWVNSVAFSPDGTKVA 245



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 83/244 (34%), Gaps = 21/244 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    FSP+  KVA  +YD      + L D     + + +      + +  
Sbjct: 13  QTLEGHSDSVRSVAFSPDGTKVASGSYDQ----TIRLWDAATGESLQTLEGHLGSVTSVA 68

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G +   S   D+ + ++  D  +    + L        S ++SPD +++   S   
Sbjct: 69  FSPDGTKVA-SGSHDKTIRLW--DAATGESLQTLEGHSDWVFSVAFSPDGTKVASGSL-- 123

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  +  +          +SP G  +A          I +      + 
Sbjct: 124 -DKTIRLWDAITGESLQTLEGHSNRVSSVAFSPDGTKVASGSLDKT---IRLWDAITGES 179

Query: 384 RLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDP 440
              +E   + + +  +SP G  +        D   +L+   + G + +TL     + +  
Sbjct: 180 LQTLEGHSNRVSSVAFSPDGTKVASGSD---DKTIRLWDA-ITGESLQTLEGHSGWVNSV 235

Query: 441 QWVG 444
            +  
Sbjct: 236 AFSP 239



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 86/280 (30%), Gaps = 35/280 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K          RLWD    + +  +       S   +A   S D               
Sbjct: 32  TKVASGSYDQTIRLWDAATGESL--QTLEGHLGSVTSVA--FSPD--------------- 72

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                  V SG    ++ + D                +F   FSP+  KVA  + D    
Sbjct: 73  ----GTKVASGSHDKTIRLWDAATGESLQTLEGHSDWVFSVAFSPDGTKVASGSLDK--- 125

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L D     + + +    + + +  FS +G +   S   D+ + ++   +   + + 
Sbjct: 126 -TIRLWDAITGESLQTLEGHSNRVSSVAFSPDGTKVA-SGSLDKTIRLWDA-ITGESLQT 182

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L        S ++SPD +++   SD    + + +  +   +  +  +          +SP
Sbjct: 183 LEGHSNRVSSVAFSPDGTKVASGSD---DKTIRLWDAITGESLQTLEGHSGWVNSVAFSP 239

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            G  +A          I +      +    +E  +    +
Sbjct: 240 DGTKVASGSEDKT---IRLWDAITGESLQTLEGHSGWEAS 276



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 59/165 (35%), Gaps = 12/165 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLF 302
           +    A + +      + +  FS +G +   S   D+ + ++  D  +    + L   L 
Sbjct: 6   SNWSAALQTLEGHSDSVRSVAFSPDGTKVA-SGSYDQTIRLW--DAATGESLQTLEGHLG 62

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++SPD +++   S     + + +  +   +  +  +      F   +SP G  +A
Sbjct: 63  SVTSVAFSPDGTKVASGSH---DKTIRLWDAATGESLQTLEGHSDWVFSVAFSPDGTKVA 119

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
                     I +      +    +E   + + +  +SP G  + 
Sbjct: 120 SGSLDKT---IRLWDAITGESLQTLEGHSNRVSSVAFSPDGTKVA 161


>gi|91216587|ref|ZP_01253553.1| protease, putative [Psychroflexus torquis ATCC 700755]
 gi|91185381|gb|EAS71758.1| protease, putative [Psychroflexus torquis ATCC 700755]
          Length = 1099

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 68/194 (35%), Gaps = 13/194 (6%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + +++           +V++   +  R                FS +G        +   
Sbjct: 322 DGERIVITARG-----KVFVAPVKSGRFVSFADKAAVRFRDAVFSHDGSTIYTLSDESGE 376

Query: 282 MDIYSVDLQS-NATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            +  S+      A +RLT N   +      S D   I ++   + +  +YV++      K
Sbjct: 377 FEFMSMPSNGQGAEKRLTRNGDLLRYGGEPSSDGKWIAYD---DLESNMYVLEIATGVSK 433

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGS-QERLLVEDSNLQAPTW 397
           +IS ++E    D  WSP    +AF + +      I +   D      L  + +N   P W
Sbjct: 434 KISTNQEG-IRDFAWSPDNKWLAFVQSALNTMTQIKIYNVDTGVSFDLTTDRANSFNPRW 492

Query: 398 SPSGRSLIFSRKKD 411
           SP G  + F   + 
Sbjct: 493 SPDGEFIYFLSDRS 506



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 71/206 (34%), Gaps = 30/206 (14%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               +R+   +     P  S +GK    S   +  +++Y++ +      R T    ++I+
Sbjct: 60  GGLAQRLTTHQEEENFPSISPDGKTIAFSASYEGPVEVYTMPISGGLPIRWTYERDVSIT 119

Query: 307 ASYSPDSS----QIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDL 360
            S++PD         +    +   Q+  +     ++ RI  +Q  EASY        G  
Sbjct: 120 NSWTPDGKIIYNTRAYSKVPD--NQIITIDLATKEKTRIPLAQASEASYDST-----GKT 172

Query: 361 IAFTK-----------FSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFS 407
           + F +             G    I    +   +   L +D       P W      + F 
Sbjct: 173 VYFVRPAYHRNVTKRYKGGTARQIWKFTQGADEAIKLTKDYLGGSHHPMW--FSGRVYFI 230

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINT 433
             +DG     ++SI+ NG +     T
Sbjct: 231 SDRDGIM--NIWSINENGEDLKQHTT 254



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 76/189 (40%), Gaps = 25/189 (13%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              + + + D    +++V L     +RLT         S SPD   I F +  EG  ++Y
Sbjct: 43  TTIVFAAEGD----LWTVPLNGGLAQRLTTHQEEENFPSISPDGKTIAFSASYEGPVEVY 98

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLI----AFTKFSGEKFAIGVMKKDGSQERL 385
            M  +G    R + +++ S  +  W+P G +I    A++K    +  I  +     ++  
Sbjct: 99  TMPISGGLPIRWTYERDVSITN-SWTPDGKIIYNTRAYSKVPDNQ--IITIDLATKEKTR 155

Query: 386 LVEDSNLQAPTWSPSGRSLIFSR---------KKDGDTGSKLYSIDLNGRNETLINTP-- 434
           +      +A ++  +G+++ F R         +  G T  +++     G +E +  T   
Sbjct: 156 IPLAQASEA-SYDSTGKTVYFVRPAYHRNVTKRYKGGTARQIWKF-TQGADEAIKLTKDY 213

Query: 435 -AYASDPQW 442
              +  P W
Sbjct: 214 LGGSHHPMW 222



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 80/229 (34%), Gaps = 22/229 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +  +G   + LT  +++  F P  SP+ + +A+ +   E  + VY M       P 
Sbjct: 52  DLWTVPLNGGLAQRLTTHQEEENF-PSISPDGKTIAF-SASYEGPVEVYTMPI-SGGLPI 108

Query: 252 RIGNFRSMILAPRFSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           R    R + +   ++ +GK  +    +  K     I ++DL +    R+   L     AS
Sbjct: 109 RWTYERDVSITNSWTPDGK-IIYNTRAYSKVPDNQIITIDLATKEKTRI--PLAQASEAS 165

Query: 309 YSPDSSQIVFE----------SDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           Y      + F             + G   Q++       +  ++++D       P+W   
Sbjct: 166 YDSTGKTVYFVRPAYHRNVTKRYKGGTARQIWKFTQGADEAIKLTKDYLGGSHHPMW--F 223

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
              + F         I  + ++G   +           + S S   +++
Sbjct: 224 SGRVYFISDRDGIMNIWSINENGEDLKQHTTHKEFDVRSASVSKGIIVY 272



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 75/224 (33%), Gaps = 26/224 (11%)

Query: 103 WNSLGAQVLVTGRVIKEGKD-RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
           W+    Q +    V  +    R+ +  R           GK F +   S R +  + +D 
Sbjct: 306 WDDNPVQYI--TSVHPDADGERIVITAR-----------GKVFVAPVKSGRFV--SFADK 350

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFS 220
                       +   ++   ++     +     M  +G    + LT + D + +    S
Sbjct: 351 AAVRFRDAVFSHDGSTIY---TLSDESGEFEFMSMPSNGQGAEKRLTRNGDLLRYGGEPS 407

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-D 279
            + + +AY   +      +Y+++     + K   N   +     +S + K         +
Sbjct: 408 SDGKWIAYDDLES----NMYVLEIATGVSKKISTNQEGI-RDFAWSPDNKWLAFVQSALN 462

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
               I   ++ +  +  LT     + +  +SPD   I F SDR 
Sbjct: 463 TMTQIKIYNVDTGVSFDLTTDRANSFNPRWSPDGEFIYFLSDRS 506


>gi|255930945|ref|XP_002557029.1| Pc12g01300 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581648|emb|CAP79757.1| Pc12g01300 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 664

 Score = 85.8 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 116/366 (31%), Gaps = 39/366 (10%)

Query: 77  DVF-NLISQDSFKQKI---TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
             F N I + +        T  +  P+FQ  ++   ++++   +    K    V F    
Sbjct: 323 GAFENPIPRPTELGTSSLHTPSNETPKFQHESATPVRMVLPSTLEGHSKGVTSVAFS--- 379

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES--VVSGIIK 190
             D + +       +   W      I                + + F  +S  VVSG   
Sbjct: 380 -PDGRLVASGSKDMTVKLWNTTTGGI-----HKTLQGHWSQVTCVAFSPDSRFVVSGSYD 433

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            ++ + +    N           +    FSP+   VA  + D      V L +T   +  
Sbjct: 434 ATVKLWNSATGNTDKTLKGHSGFVASVAFSPDGTLVASGSSDH----TVKLWNTSTGKIY 489

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISAS 308
           K +       L+  FS +GK  L++ +      I   +  +    + T         + +
Sbjct: 490 KTLEGHTGSGLSMAFSPDGK--LVASRGAGFHTINLWNTTTGMIYK-TFGSAPPSVSNVA 546

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-----ISQDKEASYFDPVWSPQGDLIAF 363
           +SPD   +   S R     L+ +   G+  KR     ++++         +SP G L+A 
Sbjct: 547 FSPDGKLLASVS-RGHPVSLWNV-MTGTIHKRLEGHLLAENHSDLMASVTFSPDGKLVA- 603

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    I +           +E       +  +SP GR +       G     L+  
Sbjct: 604 --TGCANKRIKLWNTTTGDMHKTLEGHTDWVHSMVFSPDGRLVA---SGSGAPDETLWLW 658

Query: 422 DLNGRN 427
           D    N
Sbjct: 659 DAGSYN 664



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 77/228 (33%), Gaps = 16/228 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                  + +    FSP+ + VA  + D      V L +T      K +    S +    
Sbjct: 364 STLEGHSKGVTSVAFSPDGRLVASGSKDM----TVKLWNTTTGGIHKTLQGHWSQVTCVA 419

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +  R ++S   D  + +++     N  + L        S ++SPD + +   S    
Sbjct: 420 FSPD-SRFVVSGSYDATVKLWN-SATGNTDKTLKGHSGFVASVAFSPDGTLVASGSS--- 474

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +  ++     +  +    S     +SP G L+A          I +         
Sbjct: 475 DHTVKLWNTSTGKIYKTLEGHTGSGLSMAFSPDGKLVA--SRGAGFHTINLWNTTTGMIY 532

Query: 385 LLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                +  ++    +SP G+ L       G   S L+++     ++ L
Sbjct: 533 KTFGSAPPSVSNVAFSPDGKLLA--SVSRGHPVS-LWNVMTGTIHKRL 577


>gi|159029156|emb|CAO87516.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 183

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 57/147 (38%), Gaps = 8/147 (5%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSP 356
           NT     +  ++ D   +VF SDR G+  +Y+     +    +    +A  +   P  S 
Sbjct: 40  NTPSSENNPRFNYDGRYLVFASDRRGQRTIYLFDRVANRLVPLPGLNQAKTYQDQPDISA 99

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  I +      K  I +  +   Q + L E+    ++ PT S +GR + F   + G  
Sbjct: 100 DGRYIVYVSEQSGKPDIYIYDRQTLQAKNLTENILGEVRHPTISGNGRFIAFESNRFGQW 159

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQ 441
             +++    +   E   + P   S P 
Sbjct: 160 NLEIF----DRGGEISPSLPPINSSPS 182



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 3/129 (2%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSP 311
           N  S    PRF+ +G+  + +  +     IY  D  +N    L               S 
Sbjct: 40  NTPSSENNPRFNYDGRYLVFASDRRGQRTIYLFDRVANRLVPLPGLNQAKTYQDQPDISA 99

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   IV+ S++ GK  +Y+        K ++++       P  S  G  IAF      ++
Sbjct: 100 DGRYIVYVSEQSGKPDIYIYDRQTLQAKNLTENILGEVRHPTISGNGRFIAFESNRFGQW 159

Query: 372 AIGVMKKDG 380
            + +  + G
Sbjct: 160 NLEIFDRGG 168



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 4/129 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRAL 273
            PRF+ + + + +A+ D      +YL D   +R     G    ++    P  S++G+  +
Sbjct: 47  NPRFNYDGRYLVFAS-DRRGQRTIYLFDRVANRLVPLPGLNQAKTYQDQPDISADGRYIV 105

Query: 274 ISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
              ++    DIY  D Q+   + LT N L      + S +   I FES+R G+  L +  
Sbjct: 106 YVSEQSGKPDIYIYDRQTLQAKNLTENILGEVRHPTISGNGRFIAFESNRFGQWNLEIFD 165

Query: 333 SNGSDQKRI 341
             G     +
Sbjct: 166 RGGEISPSL 174



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 32/93 (34%), Gaps = 4/93 (4%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +P  S + + + Y +        +Y+ D +  +A     N    +  P  S NG+     
Sbjct: 94  QPDISADGRYIVYVSEQSGKP-DIYIYDRQTLQAKNLTENILGEVRHPTISGNGRFIAFE 152

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +    ++   D     +  L     IN S S
Sbjct: 153 SNRFGQWNLEIFDRGGEISPSL---PPINSSPS 182



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 32/85 (37%), Gaps = 8/85 (9%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------P 395
           + +  +S  +P ++  G  + F      +  I +   D    RL+      QA      P
Sbjct: 38  TLNTPSSENNPRFNYDGRYLVFASDRRGQRTIYLF--DRVANRLVPLPGLNQAKTYQDQP 95

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYS 420
             S  GR +++  ++ G     +Y 
Sbjct: 96  DISADGRYIVYVSEQSGKPDIYIYD 120


>gi|227496409|ref|ZP_03926697.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
 gi|226834061|gb|EEH66444.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
          Length = 242

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 77/226 (34%), Gaps = 26/226 (11%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS- 291
              +  + + D R     + +   + +I AP ++ +G R ++    +    + S+     
Sbjct: 23  PGQVALLVIHDLRTGSQ-QVVLESKELIEAPNWTRDGARLVV----NGGGRLLSIAADGS 77

Query: 292 NATERLTNT--LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            A   +       +N     SPD + I F ++      L  +   G   +RIS       
Sbjct: 78  GALTPIEVGAVRGVNNDHVISPDGTTIYFSAE----GHLDAVGIEGGQARRISNTHPEDQ 133

Query: 350 FDPVW----SPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSN-LQAPTWS 398
               W    SP G  +A+               +  +   G  +  L    N    P + 
Sbjct: 134 PYTSWLHGVSPDGQQVAYVSVEPWGEDVFGARNLATIPAAGGAQTQLTTGPNAYDGPEYH 193

Query: 399 PSGRSLIFSRKKDGD--TGSKLYSIDLN-GRNETLINTPAYASDPQ 441
           P G  L ++ ++       ++L+ + L+ G  E L +       PQ
Sbjct: 194 PDGGWLYYNSEEASQVAGHAQLFRMRLDTGEREQLTDDDRVNWFPQ 239



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 28/212 (13%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +     +++  P ++ +  ++     +    L     D      P  +G  R +    
Sbjct: 39  QQVVLESKELIEAPNWTRDGARLV---VNGGGRLLSIAADGSGALTPIEVGAVRGVNNDH 95

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--SY----SPDSSQIV 317
             S +G     S +      + +V ++     R++NT         S+    SPD  Q+ 
Sbjct: 96  VISPDGTTIYFSAEG----HLDAVGIEGGQARRISNT-HPEDQPYTSWLHGVSPDGQQVA 150

Query: 318 FES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----TKFS 367
           + S      D  G   L  + + G  Q +++    A Y  P + P G  + +        
Sbjct: 151 YVSVEPWGEDVFGARNLATIPAAGGAQTQLTTGPNA-YDGPEYHPDGGWLYYNSEEASQV 209

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                +  M+ D  +   L +D  +    W P
Sbjct: 210 AGHAQLFRMRLDTGEREQLTDDDRVN---WFP 238



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 52/147 (35%), Gaps = 11/147 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+   + ++     D + +     R            +  L    S +G++      +
Sbjct: 97  ISPDGTTIYFSAEGHLDAVGIEGGQARRISNTHPEDQPYTSWLH-GVSPDGQQVAYVSVE 155

Query: 279 D------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----EGKEQL 328
                   A ++ ++     A  +LT          Y PD   + + S+      G  QL
Sbjct: 156 PWGEDVFGARNLATIPAAGGAQTQLTTGPNAYDGPEYHPDGGWLYYNSEEASQVAGHAQL 215

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWS 355
           + M+ +  ++++++ D   ++F    S
Sbjct: 216 FRMRLDTGEREQLTDDDRVNWFPQPQS 242



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 72/190 (37%), Gaps = 27/190 (14%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++Q  +   +   DL++ + + +  +  +  + +++ D +++V      G  +L  + ++
Sbjct: 20  ALQPGQVALLVIHDLRTGSQQVVLESKELIEAPNWTRDGARLV----VNGGGRLLSIAAD 75

Query: 335 GSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           GS      +         D V SP G  I F+        +  +  +G Q R +      
Sbjct: 76  GSGALTPIEVGAVRGVNNDHVISPDGTTIYFSAEG----HLDAVGIEGGQARRISNTHPE 131

Query: 393 QAP--TW----SPSGRSLIFSR----KKDGDTGSKLYSIDLNGRNETLINT-------PA 435
             P  +W    SP G+ + +       +D      L +I   G  +T + T       P 
Sbjct: 132 DQPYTSWLHGVSPDGQQVAYVSVEPWGEDVFGARNLATIPAAGGAQTQLTTGPNAYDGPE 191

Query: 436 YASDPQWVGF 445
           Y  D  W+ +
Sbjct: 192 YHPDGGWLYY 201


>gi|219849903|ref|YP_002464336.1| WD40 repeat-containing serine/threonine protein kinase
           [Chloroflexus aggregans DSM 9485]
 gi|219544162|gb|ACL25900.1| serine/threonine protein kinase with WD40 repeats [Chloroflexus
           aggregans DSM 9485]
          Length = 1004

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 54/318 (16%), Positives = 110/318 (34%), Gaps = 47/318 (14%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           R+W+V++ ++++  +            H   D I        G            + SG 
Sbjct: 477 RVWNVRNGREVLQLQ-----------GHE--DWIRSLAFSPDG----------RLLASGS 513

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              ++ + D        +      +L    FSP+ +++A A+ D    +R++ + +    
Sbjct: 514 ADRTIRIWDVARGETLVVLRGHTDLLGNVAFSPDGRRLASASRD--GTVRLWDVASGQQI 571

Query: 249 APKRIG-------NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
              R         N    +    FS +G++   +   +    +Y +D ++   +R L   
Sbjct: 572 DTFRFTAPVDTQSNAPFWMTGIAFSPDGRQIA-AGSINGN--VYLLDAETGNVQRELRGH 628

Query: 301 LFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               +    +YSPD   +   S  +G  +L+        ++ + + +        WSP G
Sbjct: 629 DGWVVIRGVAYSPDGRLLASASL-DGSVRLW--NPVNGVERDVLRQRGLRLLGLSWSPDG 685

Query: 359 DLIAFTKFSGEKFAIG-VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             I  +   G   AI  V      Q   +     +    +SP G+ L+      G  G+ 
Sbjct: 686 SRILSSSDMGGNLAIWDVASAQIVQSFQIT-QGVVTGVHYSPDGKLLV----ASGANGAV 740

Query: 418 LYSIDLNGRNETLINTPA 435
              +  +GR   L    A
Sbjct: 741 RVHVLESGRTLNLDGGAA 758



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 74/233 (31%), Gaps = 30/233 (12%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R+  L    +SP+ Q VA A         V L D       + +      + A  FS +G
Sbjct: 409 REDGLGAATYSPDGQLVAVAV-----GKGVQLRDAETLALQQSLNGHTGDVSALVFSPDG 463

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQL 328
                  Q D  + +++V        +L        S ++SPD   +   S DR     +
Sbjct: 464 TILASGAQDDPVVRVWNV-RNGREVLQLQGHEDWIRSLAFSPDGRLLASGSADRT----I 518

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +      +   + +       +  +SP G  +A     G    + +      Q+     
Sbjct: 519 RIWDVARGETLVVLRGHTDLLGNVAFSPDGRRLASASRDGT---VRLWDVASGQQIDTFR 575

Query: 389 -----DSNLQAPTW------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                D+   AP W      SP GR +       G     +Y +D    N   
Sbjct: 576 FTAPVDTQSNAPFWMTGIAFSPDGRQIA-----AGSINGNVYLLDAETGNVQR 623



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 76/219 (34%), Gaps = 24/219 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           ++         +    FSP+   +A      +D   V + + R  R   ++      I +
Sbjct: 443 LQQSLNGHTGDVSALVFSPDGTILA---SGAQDDPVVRVWNVRNGREVLQLQGHEDWIRS 499

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             FS +G+    S   D  + I+ V  +      L     +  + ++SPD  ++   S R
Sbjct: 500 LAFSPDGRLLA-SGSADRTIRIWDV-ARGETLVVLRGHTDLLGNVAFSPDGRRLASAS-R 556

Query: 323 EGKEQLYVMQSNGSDQK---RISQDKEASYFDPVW------SPQGDLIAFTKFSGEKFAI 373
           +G  +L+        Q    R +   +     P W      SP G  IA    +G    +
Sbjct: 557 DGTVRLW--DVASGQQIDTFRFTAPVDTQSNAPFWMTGIAFSPDGRQIAAGSING---NV 611

Query: 374 GVMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSR 408
            ++  +    +  +   +         +SP GR L  + 
Sbjct: 612 YLLDAETGNVQRELRGHDGWVVIRGVAYSPDGRLLASAS 650



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 78/235 (33%), Gaps = 15/235 (6%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
             + V+D        +    +        SP+   +A      E    +YL +T      +
Sbjct: 779  EIVVIDLTNRRPNEMLDGMNGFPLNLAVSPDHSLIAVGNERGE----IYLWETVSRTYLR 834

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQ-SNATERLTNTLFINISASY 309
            R+      +    FS++      +  +  +A  I   DL      + L           +
Sbjct: 835  RLDGLSGPVYTLAFSADNAYLAAATNQPADAPQIAVWDLARGGNPQILRGHNGPIAKLVF 894

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
            S     ++F +  +G  ++  +  + ++  ++S   +  +      +P G ++     SG
Sbjct: 895  S---GTLLFSASSDGSLRVRDVAHDNTEVLQMSLPADRGWMTSVAITPNGKVLVAGTISG 951

Query: 369  EKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                +G       +    ++     +     +P GR L  S + +G     L S+
Sbjct: 952  ---HLGFYNISNGELLREIDLASGAVLDLAITPDGRQLAVSTRDEGILLFDLSSV 1003



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 10/130 (7%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A+YSPD   +     +     + +  +     ++            V+SP G ++A    
Sbjct: 416 ATYSPDGQLVAVAVGKG----VQLRDAETLALQQSLNGHTGDVSALVFSPDGTILASGAQ 471

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +  ++      +L   +  +++  +SP GR L        D   +++ +    R
Sbjct: 472 DDPVVRVWNVRNGREVLQLQGHEDWIRSLAFSPDGRLLA---SGSADRTIRIWDV---AR 525

Query: 427 NETLINTPAY 436
            ETL+    +
Sbjct: 526 GETLVVLRGH 535


>gi|119505607|ref|ZP_01627678.1| acyl-peptide hydrolase, putative [marine gamma proteobacterium
           HTCC2080]
 gi|119458550|gb|EAW39654.1| acyl-peptide hydrolase, putative [marine gamma proteobacterium
           HTCC2080]
          Length = 629

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 104/277 (37%), Gaps = 24/277 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVY 240
            ++++     ++  +D  G N + L     Q    PR+SP+  ++AY +  DD+  L V 
Sbjct: 1   MNIMTDTAHRAIWQVDAKGNNHQPLISGPGQY-SSPRWSPSGDRLAYLSKVDDKTQLHVR 59

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTN 299
            ++T        +    S I    ++ NGK    + +    A  + ++  +         
Sbjct: 60  WLETGATAKLTTLAEAPSDI---SWAPNGKWIAFTRKVPGPAPQLGAMPEKPKGASWADP 116

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            + I+   +Y  D    +      G + L+ + + G   ++++           W+    
Sbjct: 117 AIVIDRM-TYRRDGGGNI----APGSKHLFAIPAQGGTPRQLTTADYPMRKGIAWTRDSR 171

Query: 360 LIAFT-------KFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIF---SR 408
            I F+       ++   +  +  +     +   +      + +P  SP+G  L +   S 
Sbjct: 172 DIFFSGNHSDDHEYQPRQSDLFKISLISGELEPVTHQKGAEFSPAVSPNGLFLAYLASSD 231

Query: 409 KKDGDTGSKLYSIDL-NGRNETLINT-PAYASDPQWV 443
           ++ G   S+L  ++L  G + +L +       D QW 
Sbjct: 232 QRQGYNPSQLMIMNLETGESRSLTSDFDRSIDDFQWS 268



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 66/218 (30%), Gaps = 51/218 (23%)

Query: 218 RFSPNQQKVAYATYDDEDILRV----------YLMDTRIDRAPKRIGNFRSMILAP---- 263
            ++PN + +A+         ++             D  I              +AP    
Sbjct: 80  SWAPNGKWIAFTRKVPGPAPQLGAMPEKPKGASWADPAIVIDRMTYRRDGGGNIAPGSKH 139

Query: 264 -------------------------RFSSNGKRALISVQKDEA-------MDIYSVDLQS 291
                                     ++ + +    S    +         D++ + L S
Sbjct: 140 LFAIPAQGGTPRQLTTADYPMRKGIAWTRDSRDIFFSGNHSDDHEYQPRQSDLFKISLIS 199

Query: 292 NATERLTNTLFINISASYSPDSSQIVF--ESD-REGKE--QLYVMQSNGSDQKRISQDKE 346
              E +T+      S + SP+   + +   SD R+G    QL +M     + + ++ D +
Sbjct: 200 GELEPVTHQKGAEFSPAVSPNGLFLAYLASSDQRQGYNPSQLMIMNLETGESRSLTSDFD 259

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            S  D  WS  G+++           I  +   G Q +
Sbjct: 260 RSIDDFQWSKAGEVLWIQYVDQGMTRIASLSLSGKQRQ 297


>gi|327310653|ref|YP_004337550.1| tricorn protease [Thermoproteus uzoniensis 768-20]
 gi|326947132|gb|AEA12238.1| tricorn protease [Thermoproteus uzoniensis 768-20]
          Length = 1025

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 65/198 (32%), Gaps = 39/198 (19%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---- 320
            +  G   +   + D                RLT+   + +   +SPD   I F      
Sbjct: 8   PDIYGDDMVFVTEDDLWKY------SGGRAYRLTSDFGVVVRPKFSPDGRYIAFTRLQQT 61

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMK 377
           D+    + YV+ ++G   KR++           W+P G ++ F+ F     +   +  + 
Sbjct: 62  DQGTLAEAYVVPADGGQPKRLTYFGSPYTRVAGWTPDGRVLVFSDFKMPFPQWRELYSVS 121

Query: 378 KDGSQER--------LLVEDS-------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            DG  ER        LL  D        N   P W          R + G  G    S D
Sbjct: 122 LDGRYERLNLGPATALLYGDGFVVLGRNNYDLPYW---------KRYRGGMRGVLWISRD 172

Query: 423 LNGRNETLINTPAYASDP 440
                E L++ P   + P
Sbjct: 173 GGRTFEKLVDLPGNVTSP 190



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 81/228 (35%), Gaps = 38/228 (16%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPK--RIGNFRSMILAPRFSSNGKRALIS----VQKDEA 281
           Y     +D++ V   D       +  R+ +   +++ P+FS +G+    +      +   
Sbjct: 7   YPDIYGDDMVFVTEDDLWKYSGGRAYRLTSDFGVVVRPKFSPDGRYIAFTRLQQTDQGTL 66

Query: 282 MDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQ---LYVMQSNG-- 335
            + Y V       +RLT         A ++PD   +VF   +    Q   LY +  +G  
Sbjct: 67  AEAYVVPADGGQPKRLTYFGSPYTRVAGWTPDGRVLVFSDFKMPFPQWRELYSVSLDGRY 126

Query: 336 -----SDQKRISQD------KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-- 382
                     +            +Y  P W          ++ G    +  + +DG +  
Sbjct: 127 ERLNLGPATALLYGDGFVVLGRNNYDLPYW---------KRYRGGMRGVLWISRDGGRTF 177

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           E+L+    N+ +P     G  + F    +G     LYS+D +G++   
Sbjct: 178 EKLVDLPGNVTSPMIV--GGRIYFVSDHEG--VGNLYSVDPSGKDLRR 221



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 84/271 (30%), Gaps = 26/271 (9%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-- 231
               ++        +      +    G    Y   S   ++  P+FSP+ + +A+     
Sbjct: 2   KGYYMYPDIYGDDMVFVTEDDLWKYSGGRA-YRLTSDFGVVVRPKFSPDGRYIAFTRLQQ 60

Query: 232 -DDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQK---DEAMDIYS 286
            D   +   Y++       PKR+  F S       ++ +G+  + S  K    +  ++YS
Sbjct: 61  TDQGTLAEAYVVPAD-GGQPKRLTYFGSPYTRVAGWTPDGRVLVFSDFKMPFPQWRELYS 119

Query: 287 VDLQS-------NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           V L              L       +    + D     ++  R G   +  +  +G    
Sbjct: 120 VSLDGRYERLNLGPATALLYGDGFVVLGRNNYD--LPYWKRYRGGMRGVLWISRDGGRTF 177

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
               D   +   P+    G  I F         +  +   G   R   +         S 
Sbjct: 178 EKLVDLPGNVTSPMIV--GGRIYFVSDHEGVGNLYSVDPSGKDLRRHTDFKEFYVRNASS 235

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            GR ++F        G  +Y  D +GR E L
Sbjct: 236 DGRRVVF------QMGGDIYLYDPSGRLELL 260



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 58/149 (38%), Gaps = 12/149 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDRE 323
            S++G +  +S   D A++IY  D      +RL   L  I   A   P   ++   + R 
Sbjct: 325 VSADGDKIAVST-YDGAVEIYGKD--GALLKRLEPGLGLIEALALKYP---RLALANHRG 378

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMK-KDGS 381
              +L+++         + + +     +  W P G  +A+++ SG     I +   + G 
Sbjct: 379 ---ELWLLDVETGTAALVDRSEYGLITELAWHPSGLWLAYSRPSGPYTQNIRLYDVRSGR 435

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
                   S    P + P GR L F  ++
Sbjct: 436 SHDATPPTSFDYGPAFDPDGRYLYFLSRR 464



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 61/438 (13%), Positives = 118/438 (26%), Gaps = 111/438 (25%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
           +   V  R       R     RL         + + +       +    T     Y  + 
Sbjct: 36  SDFGVVVRPKFSPDGRYIAFTRLQQTDQGT--LAEAYVVPADGGQPKRLTYFGSPYTRVA 93

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK-- 225
           G   D   R+L  S+  +       L  +  DG   R        +L+   F    +   
Sbjct: 94  GWTPD--GRVLVFSDFKMPFPQWRELYSVSLDGRYERLNLGPATALLYGDGFVVLGRNNY 151

Query: 226 -VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            + Y       +  V  +     R  +++ +    + +P     G R       +   ++
Sbjct: 152 DLPYWKRYRGGMRGVLWISRDGGRTFEKLVDLPGNVTSP--MIVGGRIYFVSDHEGVGNL 209

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG--------- 335
           YSVD       R T+     +  + S D  ++VF+        +Y+   +G         
Sbjct: 210 YSVDPSGKDLRRHTDFKEFYVRNA-SSDGRRVVFQM----GGDIYLYDPSGRLELLDIEA 264

Query: 336 ------------------------SDQKRISQDKEASYFDPVW----------------- 354
                                   S    +   +  ++  P W                 
Sbjct: 265 PLARKQKAPKFVDPFKYLEGFALPSGDSVVLISRGQAFHMPAWEGAVVGLGAGGATRYKH 324

Query: 355 -SPQGDLIAFTKFSG------------------------------------EKFAIGVMK 377
            S  GD IA + + G                                     +  + ++ 
Sbjct: 325 VSADGDKIAVSTYDGAVEIYGKDGALLKRLEPGLGLIEALALKYPRLALANHRGELWLLD 384

Query: 378 KDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN-- 432
            +     L+       +    W PSG  L +SR   G     +   D+ +GR+       
Sbjct: 385 VETGTAALVDRSEYGLITELAWHPSGLWLAYSR-PSGPYTQNIRLYDVRSGRSHDATPPT 443

Query: 433 ----TPAYASDPQWVGFM 446
                PA+  D +++ F+
Sbjct: 444 SFDYGPAFDPDGRYLYFL 461



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 46/143 (32%), Gaps = 11/143 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEP------RFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           + V   DGA   Y          EP        +    ++A A +  E    ++L+D   
Sbjct: 332 IAVSTYDGAVEIYGKDGALLKRLEPGLGLIEALALKYPRLALANHRGE----LWLLDVET 387

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINI 305
             A     +   +I    +  +G     S        +I   D++S  +   T     + 
Sbjct: 388 GTAALVDRSEYGLITELAWHPSGLWLAYSRPSGPYTQNIRLYDVRSGRSHDATPPTSFDY 447

Query: 306 SASYSPDSSQIVFESDREGKEQL 328
             ++ PD   + F S R     +
Sbjct: 448 GPAFDPDGRYLYFLSRRALNPAM 470



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 79/269 (29%), Gaps = 38/269 (14%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  L ++D +      +  S   ++ E  + P+   +AY+         + L D R  
Sbjct: 375 NHRGELWLLDVETGTAALVDRSEYGLITELAWHPSGLWLAYSRPSGPYTQNIRLYDVRSG 434

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNATERLTNTLF 302
           R         S    P F  +G+      ++           Y V  + +    L     
Sbjct: 435 R-SHDATPPTSFDYGPAFDPDGRYLYFLSRRALNPAMDPVQFYYVFAKHSKP-YLIPLRR 492

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            ++S           F   R+ +     +   G   +      +   +  V   +G  +A
Sbjct: 493 DDLSP----------FVEYRKAEGAAQDIDVEGIAARAEPFPVDEGIYAAVVGLKGGKVA 542

Query: 363 FTKF-------------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           + ++                +  + V   +   +  L     + A   SP G+ L+    
Sbjct: 543 WLRYEVEGALKYYLWSAQERRGVVEVYDLETKSKEQLASG--VSAIRASPDGKYLLL--- 597

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                  +L  +D+  R +     P   S
Sbjct: 598 ---KEEGRLRLVDVEKRPDMQSREPGRKS 623


>gi|269127362|ref|YP_003300732.1| metallophosphoesterase [Thermomonospora curvata DSM 43183]
 gi|268312320|gb|ACY98694.1| metallophosphoesterase [Thermomonospora curvata DSM 43183]
          Length = 1831

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 83/307 (27%), Gaps = 42/307 (13%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            R+WD    + +                H  +D I+       G            + +  
Sbjct: 1503 RIWDTTTGQTL-------------HTLHGHTDPIWDLAWHPNG----------HHLATAS 1539

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               +  + D       +        +    + PN   +A A++D        + DT   +
Sbjct: 1540 DDGTARIWDTTTGQTLHTLHGHTDWVRALAWHPNGHHLATASHDG----TARIWDTTTGQ 1595

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISA 307
                +      I    +  NG     +   D    I+  D  +      L          
Sbjct: 1596 TLHTLHGHTGPIWDLAWHPNGHHLA-TASHDGTARIW--DTTTGQTLHTLHGHTGPIWDL 1652

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            ++ P+   +   +  +G  +++   +                +D  W P G  +A     
Sbjct: 1653 AWHPNGHHLA-TASHDGTARIW--DTTTGQTLHTLHGHTGPIWDLAWHPNGHHLATASHD 1709

Query: 368  GEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            G    I +      Q    +           W P+G  L  + +   D   +++ I    
Sbjct: 1710 GT---IHIWDTTTGQTLHTLHGHTDWVSALAWHPNGHHLATASR---DGAIRIWDITSGT 1763

Query: 426  RNETLIN 432
               TL+ 
Sbjct: 1764 PLSTLLP 1770



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/340 (13%), Positives = 91/340 (26%), Gaps = 42/340 (12%)

Query: 129  RLWDVKDRKQII---GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
            R+WD    + +    G   + S  +W    H ++   +            + L       
Sbjct: 1251 RIWDTTTGQTLHTLHGHTDWVSALAWHPNGHHLATASHDGTIRIWDTTTGQTLHTLHGHT 1310

Query: 186  SGIIK-------NSLCVMDRDGANIRY---------LTPSRDQILFEPRFSPNQQKVAYA 229
              I         + L     DG    +                 +    + PN   +A A
Sbjct: 1311 DPIWDLAWHPNGHHLATASHDGTARIWDTTTGQTLHTLHGHTDWVSALAWHPNGHHLATA 1370

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            ++D        + DT   +    +      I    +  NG     +   D    I+  D 
Sbjct: 1371 SHDG----TARIWDTTTGQTLHTLHGHTDPIWDLAWHPNGHHLA-TASHDGTARIW--DT 1423

Query: 290  QSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             +      L        + ++ P+   +   +  +G  +++   +               
Sbjct: 1424 TTGQTLHTLHGHTDWVSALAWHPNGHHLA-TASHDGTARIW--DTTTGQTLHTLHGHTDP 1480

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSL 404
             +D  W P G  +A     G    I     D +  + L        P     W P+G  L
Sbjct: 1481 IWDLAWHPNGHHLATASRDGTA-RIW----DTTTGQTLHTLHGHTDPIWDLAWHPNGHHL 1535

Query: 405  IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              +     D  ++++         TL     +     W  
Sbjct: 1536 ATASD---DGTARIWDTTTGQTLHTLHGHTDWVRALAWHP 1572



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 50/369 (13%), Positives = 103/369 (27%), Gaps = 63/369 (17%)

Query: 82   ISQDSFKQKITNPDSIPRFQ--DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
            +      +  T+P     +    W+         G++I    D      R+WD    + +
Sbjct: 1085 LPPFRQPRLETSPSRQATYTTVAWSP-------DGKLITTASDDGTA--RIWDTTTGQTL 1135

Query: 140  IGKKFFSSPA---SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
                  + P    +W    H ++            D  +RI   +               
Sbjct: 1136 HTLHGHTGPIWDLAWHPNGHHLA--------TASDDGTARIWDTTT-------------- 1173

Query: 197  DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
               G  +  L    D +     + PN   +A A+ D        + DT   +    +   
Sbjct: 1174 ---GQTLHTLHGHTDWVSAL-AWHPNGHHLATASRDG----TARIWDTTTGQTLHTLHGH 1225

Query: 257  RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQ 315
               + A  +  NG     +   D    I+  D  +      L        + ++ P+   
Sbjct: 1226 TDWVSALAWHPNGHHLA-TASHDGTARIW--DTTTGQTLHTLHGHTDWVSALAWHPNGHH 1282

Query: 316  IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            +   +  +G   + +  +                +D  W P G  +A     G      +
Sbjct: 1283 LA-TASHDGT--IRIWDTTTGQTLHTLHGHTDPIWDLAWHPNGHHLATASHDGTA---RI 1336

Query: 376  MKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                  Q    +           W P+G  L  +     D  ++++    +      ++T
Sbjct: 1337 WDTTTGQTLHTLHGHTDWVSALAWHPNGHHLATASH---DGTARIW----DTTTGQTLHT 1389

Query: 434  PAYASDPQW 442
                +DP W
Sbjct: 1390 LHGHTDPIW 1398



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 35/107 (32%), Gaps = 12/107 (11%)

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TW 397
            S  ++A+Y    WSP G LI      G    I     D +  + L        P     W
Sbjct: 1096 SPSRQATYTTVAWSPDGKLITTASDDGTA-RIW----DTTTGQTLHTLHGHTGPIWDLAW 1150

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             P+G  L  +     D  ++++         TL     + S   W  
Sbjct: 1151 HPNGHHLATASD---DGTARIWDTTTGQTLHTLHGHTDWVSALAWHP 1194


>gi|212534082|ref|XP_002147197.1| Pfs, NACHT and WD domain protein [Penicillium marneffei ATCC 18224]
 gi|210069596|gb|EEA23686.1| Pfs, NACHT and WD domain protein [Penicillium marneffei ATCC 18224]
          Length = 1558

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 89/270 (32%), Gaps = 17/270 (6%)

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
              + S  V SG    ++ + D     ++         +    F  + + VA A+YDD   
Sbjct: 1056 FSYDSRLVASGSGDATVKLWDLATGTLQLTLKGHSHSVEVVAFILDGRLVASASYDD--- 1112

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              V L D       +        + A  FS NG R + S   D+ + ++ +D      + 
Sbjct: 1113 -TVMLWDPATGTLLQAFKGHSGFVTAMAFSPNG-RLVASASYDDIVKLWDLD-TGTVLQT 1169

Query: 297  LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            L   L I    ++SPDS  +   SD      + +         R  +    S     +SP
Sbjct: 1170 LRGHLEIVTIVAFSPDSRLLASGSD---DMTVKLWDPATGTLLRTLKGHYGSVMTVAFSP 1226

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDT 414
                +A          + +     S  +  +   +    A  +SP  + +       GD 
Sbjct: 1227 DSGQVA---SGSGDKTVKLWDPATSPLQQTLNGHSDAITAVAFSPDNKLVA---SGSGDA 1280

Query: 415  GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              KL+        +TL +   + +   +  
Sbjct: 1281 TVKLWDPATGTLQQTLKDHSDWITAIAFSP 1310



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 86/255 (33%), Gaps = 23/255 (9%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S  V SG    ++ + D   + ++         +    FSP+ + VA  + D      V 
Sbjct: 1228 SGQVASGSGDKTVKLWDPATSPLQQTLNGHSDAITAVAFSPDNKLVASGSGD----ATVK 1283

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-- 298
            L D       + + +    I A  FS NG R + S   D  + ++  DL +    +LT  
Sbjct: 1284 LWDPATGTLQQTLKDHSDWITAIAFSPNG-RLVASASGDMTVKLW--DLATGTL-QLTLK 1339

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                +    ++SP+S  +   S     + + +         +  +          +S   
Sbjct: 1340 GHSDMVTVLAFSPNSRLMASGSY---DKTVKLWDLATGTLLQTLKGHSHCTTAVAFSADS 1396

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGS 416
             L+A          + +        +  +   +    A  +SP GR ++      GD   
Sbjct: 1397 RLVASASHDE---IVRLWDPVTGTLQQTLGGHSRCATAVAFSPDGRLVV---SASGDMTV 1450

Query: 417  KLYSIDLNGRNETLI 431
            +L+  DL      L 
Sbjct: 1451 RLW--DLATGTLQLT 1463



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 87/266 (32%), Gaps = 18/266 (6%)

Query: 164  QSITGEKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            Q       D  + + F  ++  V SG    ++ + D     ++         +    FSP
Sbjct: 1251 QQTLNGHSDAITAVAFSPDNKLVASGSGDATVKLWDPATGTLQQTLKDHSDWITAIAFSP 1310

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            N + VA A+ D      V L D         +     M+    FS N +    S   D+ 
Sbjct: 1311 NGRLVASASGDM----TVKLWDLATGTLQLTLKGHSDMVTVLAFSPNSRLMA-SGSYDKT 1365

Query: 282  MDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + ++  DL +    + L        + ++S DS  +   S     E + +        ++
Sbjct: 1366 VKLW--DLATGTLLQTLKGHSHCTTAVAFSADSRLVASASH---DEIVRLWDPVTGTLQQ 1420

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWS 398
                         +SP G L+           + +        +L ++  +    A  +S
Sbjct: 1421 TLGGHSRCATAVAFSPDGRLVVSAS---GDMTVRLWDLATGTLQLTLKGHSDLIWALAFS 1477

Query: 399  PSGRSLIFSRKKDGDTGSKLYSIDLN 424
            P G  L+  + +      +L SI   
Sbjct: 1478 PDGSFLVTDQGRFDIESLRLRSISPT 1503



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 77/229 (33%), Gaps = 19/229 (8%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                     +    FSP+ + VA  + D      + L D       + +      ++   
Sbjct: 958  QTLEDHSDSVMAVAFSPDSRLVASGSSDK----TIKLWDPATGTLLQTLKGHSDSVMIVA 1013

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
            FS NGK    SV  D  + ++  DL +   ++       +++A ++S DS  +   S   
Sbjct: 1014 FSPNGKLLA-SVSGDLTVKLW--DLATGTLQQTLKGHSHSVNAIAFSYDSRLVASGS--- 1067

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            G   + +        +   +    S     +   G L+A   +      + +        
Sbjct: 1068 GDATVKLWDLATGTLQLTLKGHSHSVEVVAFILDGRLVASASYDDT---VMLWDPATGTL 1124

Query: 384  RLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                      + A  +SP+GR +  +   D     KL+ +D     +TL
Sbjct: 1125 LQAFKGHSGFVTAMAFSPNGRLVASASYDD---IVKLWDLDTGTVLQTL 1170



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 72/227 (31%), Gaps = 20/227 (8%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG    ++ + D     +          +    FSPN + +A  + D    L V L D
Sbjct: 979  VASGSSDKTIKLWDPATGTLLQTLKGHSDSVMIVAFSPNGKLLASVSGD----LTVKLWD 1034

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NT 300
                   + +      + A  FS +  R + S   D  + ++  DL +    +LT   ++
Sbjct: 1035 LATGTLQQTLKGHSHSVNAIAFSYD-SRLVASGSGDATVKLW--DLATGTL-QLTLKGHS 1090

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              + + A    D   +   S     + + +         +  +          +SP G L
Sbjct: 1091 HSVEVVAFIL-DGRLVASASY---DDTVMLWDPATGTLLQAFKGHSGFVTAMAFSPNGRL 1146

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLI 405
            +A   +      + +   D       +           +SP  R L 
Sbjct: 1147 VASASYDD---IVKLWDLDTGTVLQTLRGHLEIVTIVAFSPDSRLLA 1190



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/198 (11%), Positives = 66/198 (33%), Gaps = 14/198 (7%)

Query: 219  FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            F+P +  +   Y       I ++  ++       + + +    ++A  FS +  R + S 
Sbjct: 924  FAPERSIIRNKYIDKTPSWIQKLPEVELAWSSVLQTLEDHSDSVMAVAFSPD-SRLVASG 982

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D+ + ++  D  +    +       ++   ++SP+   +   S   G   + +     
Sbjct: 983  SSDKTIKLW--DPATGTLLQTLKGHSDSVMIVAFSPNGKLLASVS---GDLTVKLWDLAT 1037

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQ 393
               ++  +    S     +S    L+A          + +        +L +     +++
Sbjct: 1038 GTLQQTLKGHSHSVNAIAFSYDSRLVA---SGSGDATVKLWDLATGTLQLTLKGHSHSVE 1094

Query: 394  APTWSPSGRSLIFSRKKD 411
               +   GR +  +   D
Sbjct: 1095 VVAFILDGRLVASASYDD 1112


>gi|145527034|ref|XP_001449320.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124416902|emb|CAK81923.1| unnamed protein product [Paramecium tetraurelia]
          Length = 417

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 95/253 (37%), Gaps = 15/253 (5%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ SG   N + + D     +R         ++   FSP+   +A  +YD+     + L 
Sbjct: 19  TLASGSDDNFIRLWDIKTGQLRAKLDGHSSSVWSVNFSPDGATLASGSYDN----SIRLW 74

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTL 301
           D +      ++   ++ + +  FS +G     +   D ++ ++  D+++   + +L    
Sbjct: 75  DAKTGEQKAKLDCHQNGVYSVNFSPDGTTLA-TGSNDNSIRLW--DVKTGQQKSKLDGHE 131

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++SPD S I   S     + + +       QK          +   +SP G  +
Sbjct: 132 DSVKSVNFSPDGSTIASGSL---DKSIRLWDVKTGQQKAQLDGHLGFVYSVNFSPDGTTL 188

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A      +   +  +K    + +L      + +  +SP G +L       GD    L+ +
Sbjct: 189 ASGSLD-KSIRLWDVKTRLQKAQLDGHSDYVTSVDFSPDGTTLA---SGSGDKSMCLWDV 244

Query: 422 DLNGRNETLINTP 434
               +   L+++ 
Sbjct: 245 KTGQQIAKLVHSN 257



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 100/288 (34%), Gaps = 38/288 (13%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    RLWD K  +Q                 H   + +Y       G        
Sbjct: 63  ASGSYDNSIRLWDAKTGEQKAKLD-----------CHQ--NGVYSVNFSPDG-------- 101

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              ++ +G   NS+ + D      +      +  +    FSP+   +A  + D      +
Sbjct: 102 --TTLATGSNDNSIRLWDVKTGQQKSKLDGHEDSVKSVNFSPDGSTIASGSLDK----SI 155

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLT 298
            L D +  +   ++      + +  FS +G     S   D+++ ++  D+++   + +L 
Sbjct: 156 RLWDVKTGQQKAQLDGHLGFVYSVNFSPDGTTLA-SGSLDKSIRLW--DVKTRLQKAQLD 212

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQ 357
                  S  +SPD + +   S   G + + +        ++I++   ++  + + +S  
Sbjct: 213 GHSDYVTSVDFSPDGTTLASGS---GDKSMCLWDVKTG--QQIAKLVHSNCVNSICYSSD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           G  +A          +  +K    + +L    +++    +SP G ++ 
Sbjct: 268 GTTLASGSQDNS-IRLWDVKARQQKAKLDGHSASVYQVYFSPDGTTIA 314



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 11/119 (9%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S   SPD + +   SD      + +        +       +S +   +SP G  +A  
Sbjct: 9   TSVKISPDGTTLASGSD---DNFIRLWDIKTGQLRAKLDGHSSSVWSVNFSPDGATLASG 65

Query: 365 KFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +      I +      ++  +L    + + +  +SP G +L        D   +L+ +
Sbjct: 66  SYDNS---IRLWDAKTGEQKAKLDCHQNGVYSVNFSPDGTTLATGSN---DNSIRLWDV 118



 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 68/196 (34%), Gaps = 33/196 (16%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                  L    RLWDVK R Q             +   H  SD +        G     
Sbjct: 186 TTLASGSLDKSIRLWDVKTRLQ-----------KAQLDGH--SDYVTSVDFSPDG----- 227

Query: 177 ILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                 ++ SG    S+C+ D   G  I  L  S    +    +S +   +A  + D+  
Sbjct: 228 -----TTLASGSGDKSMCLWDVKTGQQIAKLVHSNC--VNSICYSSDGTTLASGSQDN-- 278

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              + L D +  +   ++    + +    FS +G     S   D+++  +  D+++    
Sbjct: 279 --SIRLWDVKARQQKAKLDGHSASVYQVYFSPDGTTIA-SGSLDKSIRFW--DVKTGQQI 333

Query: 296 RLTNTLFINISASYSP 311
           + ++  + +I A   P
Sbjct: 334 QQSDNHYKDILAQLQP 349


>gi|262194516|ref|YP_003265725.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262077863|gb|ACY13832.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1190

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 10/170 (5%)

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               + AP         + +  FS +G R   S   D  + ++S D    A   L      
Sbjct: 967  LHSNVAPVVFTEHEDAVWSASFSPDGARVA-SASYDRTILLWSAD-GVGAPTVLRGHEDA 1024

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +S ++SPD +++   S ++G  +++   ++G+   RI+   EA      +SP G  +  
Sbjct: 1025 VLSVNFSPDGTRLASAS-KDGSVRVW--NTDGAGASRIAGKHEAGTNSASFSPDGSRVVS 1081

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKD 411
                     + V   DGS E +++ +         +SP GR L+ +    
Sbjct: 1082 AAQDAT---VRVWNADGSGEPVVLRNHGDWDTQARFSPDGRRLVTAADDG 1128



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 11/168 (6%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
               +    +  ++   FSP+  +VA A+YD      + L       AP  +      +L+
Sbjct: 972  APVVFTEHEDAVWSASFSPDGARVASASYDR----TILLWSADGVGAPTVLRGHEDAVLS 1027

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESD 321
              FS +G R   S  KD ++ ++  +       R+         SAS+SPD S++V  + 
Sbjct: 1028 VNFSPDGTRLA-SASKDGSVRVW--NTDGAGASRIAGKHEAGTNSASFSPDGSRVVSAAQ 1084

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                  + V  ++GS +  + ++         +SP G  +      G 
Sbjct: 1085 ---DATVRVWNADGSGEPVVLRNHGDWDTQARFSPDGRRLVTAADDGT 1129



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 67/162 (41%), Gaps = 7/162 (4%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             E   +++        V S     ++ +   DG     +    +  +    FSP+  ++A
Sbjct: 979  HEDAVWSASFSPDGARVASASYDRTILLWSADGVGAPTVLRGHEDAVLSVNFSPDGTRLA 1038

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A+ D      V + +T    A +  G   +   +  FS +G R ++S  +D  + +++ 
Sbjct: 1039 SASKDG----SVRVWNTDGAGASRIAGKHEAGTNSASFSPDGSR-VVSAAQDATVRVWNA 1093

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            D  S     L N    +  A +SPD  ++V  +D +G  +++
Sbjct: 1094 D-GSGEPVVLRNHGDWDTQARFSPDGRRLVTAAD-DGTVRVW 1133


>gi|325297708|ref|YP_004257625.1| prolyl oligopeptidase family protein [Bacteroides salanitronis DSM
           18170]
 gi|324317261|gb|ADY35152.1| prolyl oligopeptidase family protein [Bacteroides salanitronis DSM
           18170]
          Length = 702

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 93/295 (31%), Gaps = 68/295 (23%)

Query: 218 RFSPNQQKVAYA--TYDDEDILRVYLMDTRI--DRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+ +++AY    Y  +D     ++ T        + +        +P +   G +  
Sbjct: 58  SVSPDGKQIAYTVSYYSVKDNASHTVIYTMNADGSNNRMLTATPENESSPAWIKGGTKIA 117

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---------ESD--- 321
               +  +  ++ ++      ++L+          +SPD ++++F          SD   
Sbjct: 118 FLTPQGGSYQLWEMNPDGTGRKQLSEYKGDIEGFKFSPDETKVLFIAQVKYGKRTSDLYP 177

Query: 322 ----REGK-----------------EQLYVMQSNGSDQKR----ISQDKEASYFDP---- 352
                 G+                    ++   +G+        ++ +   S   P    
Sbjct: 178 DLDKASGRVINDLMYKHWDEWVETVPHPFIADFDGNKVGEAADILAGEPYESPMKPFGGI 237

Query: 353 ---VWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVED-------SNLQA 394
               WS     IA+T                I +   +  Q R L ++            
Sbjct: 238 EQLAWSNDSKQIAYTCRKKTGVAYSQSTDSDIYLYDIETRQTRNLCKEDANDQNKGYDTN 297

Query: 395 PTWSPSGRSLIF-SRKKDG--DTGSKLYSIDLNGRNETLINTP--AYASDPQWVG 444
           P +SP G  + + S ++DG     ++L  ++L+   +T +     +   D  W  
Sbjct: 298 PKFSPDGTRIAWQSMERDGYESDRNRLCVMNLSTGEKTYVTEAFQSGVDDYCWAP 352



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 94/274 (34%), Gaps = 67/274 (24%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F++    S      L  M+ DG   + L+  +  I    +FSP++ KV +      
Sbjct: 114 TKIAFLTPQGGS----YQLWEMNPDGTGRKQLSEYKGDIEGF-KFSPDETKVLFIAQVKY 168

Query: 235 DILRVYLMDTRIDRAPKRI--------------------GNFRSMIL------------- 261
                 L       + + I                     +F    +             
Sbjct: 169 GKRTSDLYPDLDKASGRVINDLMYKHWDEWVETVPHPFIADFDGNKVGEAADILAGEPYE 228

Query: 262 AP----------RFSSNGKRALIS--------VQKDEAMDIYSVDLQSNATERL------ 297
           +P           +S++ K+   +          +    DIY  D+++  T  L      
Sbjct: 229 SPMKPFGGIEQLAWSNDSKQIAYTCRKKTGVAYSQSTDSDIYLYDIETRQTRNLCKEDAN 288

Query: 298 TNTLFINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYFDP 352
                 + +  +SPD ++I ++S +R+G    + +L VM  +  ++  +++  ++   D 
Sbjct: 289 DQNKGYDTNPKFSPDGTRIAWQSMERDGYESDRNRLCVMNLSTGEKTYVTEAFQSGVDDY 348

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            W+P  + + FT        I      G  E+L 
Sbjct: 349 CWAPDSETLYFTGVWHATSMIHSTNLKGEVEQLT 382



 Score = 81.2 bits (199), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 50/320 (15%), Positives = 98/320 (30%), Gaps = 80/320 (25%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        +  M+ DG+N R LT + +     P +     K+A+ T       +++ 
Sbjct: 73  YSVKDNASHTVIYTMNADGSNNRMLTATPEN-ESSPAWIKGGTKIAFLT-PQGGSYQLWE 130

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------------- 278
           M+       K++  ++  I   +FS +  + L   Q                        
Sbjct: 131 MNPD-GTGRKQLSEYKGDIEGFKFSPDETKVLFIAQVKYGKRTSDLYPDLDKASGRVIND 189

Query: 279 ----------DEAMDIYSVDLQSNATERLTNTLFINI-------SA----------SYSP 311
                     +     +  D   N           +I       S           ++S 
Sbjct: 190 LMYKHWDEWVETVPHPFIADFDGNKV-----GEAADILAGEPYESPMKPFGGIEQLAWSN 244

Query: 312 DSSQIVFE--------SDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDPVWSPQG 358
           DS QI +           +     +Y+        + +     +   +    +P +SP G
Sbjct: 245 DSKQIAYTCRKKTGVAYSQSTDSDIYLYDIETRQTRNLCKEDANDQNKGYDTNPKFSPDG 304

Query: 359 DLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKD 411
             IA+     + +      + VM     ++  + E   S +    W+P   +L F+    
Sbjct: 305 TRIAWQSMERDGYESDRNRLCVMNLSTGEKTYVTEAFQSGVDDYCWAPDSETLYFTGV-- 362

Query: 412 GDTGSKLYSIDLNGRNETLI 431
               S ++S +L G  E L 
Sbjct: 363 WHATSMIHSTNLKGEVEQLT 382



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 40/103 (38%), Gaps = 5/103 (4%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                    P+FSP+  ++A+ + +      D  R+ +M+            F+S +   
Sbjct: 289 DQNKGYDTNPKFSPDGTRIAWQSMERDGYESDRNRLCVMNLSTGEKTYVTEAFQSGVDDY 348

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            ++ + +    +        I+S +L+    E+LT  ++   S
Sbjct: 349 CWAPDSETLYFTGVWHATSMIHSTNLK-GEVEQLTEGMYDYAS 390


>gi|288916591|ref|ZP_06410967.1| WD-40 repeat protein [Frankia sp. EUN1f]
 gi|288352022|gb|EFC86223.1| WD-40 repeat protein [Frankia sp. EUN1f]
          Length = 523

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 94/305 (30%), Gaps = 42/305 (13%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWDV   +Q             R +    ++ ++       G+             +  
Sbjct: 223 RLWDVASGQQ-------------RAVLKGHTEPVWSVAISPNGEHF----------ATAS 259

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              ++ + D        +        +   FSP+  ++A  + D        L D+   R
Sbjct: 260 WDRTIRLWDITTGRQVAVLTGHLGPAWFVTFSPDGTRIASTSADG----TARLWDSATGR 315

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISA 307
               +   ++ +    FS +G     +  KD    ++  D  +      LT       + 
Sbjct: 316 QQAVLAGHKNTVYWGSFSPDGTLLA-TTSKDTTACLW--DATTGRQRAVLTGHTDPVWAG 372

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD S     S     +   +          +            +SP G + A     
Sbjct: 373 EFSPDGSLFATTSK---DKTARLWDVATGRTHAVLDRHSDPVPWGSFSPDGTVFATASRD 429

Query: 368 GEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                  V    GS+  +L   D  +    +SP G  L  + K   DT  +L+  D+   
Sbjct: 430 KTARLWDV--ATGSERAVLTGHDDTVWHGRFSPDGTLLATTSK---DTTVRLW--DVASG 482

Query: 427 NETLI 431
           +E L+
Sbjct: 483 SERLV 487



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 52/299 (17%), Positives = 96/299 (32%), Gaps = 45/299 (15%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWD+   +Q+        PA             +       G   +RI   S    + 
Sbjct: 264 IRLWDITTGRQVAVLTGHLGPA-------------WFVTFSPDG---TRIASTSADGTA- 306

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                  + D      + +       ++   FSP+   +A  + D        L D    
Sbjct: 307 ------RLWDSATGRQQAVLAGHKNTVYWGSFSPDGTLLATTSKDTTAC----LWDATTG 356

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R    +      + A  FS +G     +  KD+   ++ V         L          
Sbjct: 357 RQRAVLTGHTDPVWAGEFSPDG-SLFATTSKDKTARLWDV-ATGRTHAVLDRHSDPVPWG 414

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SPD +     + R+   +L+        ++ +    + + +   +SP G L+A T   
Sbjct: 415 SFSPDGTVFA-TASRDKTARLW--DVATGSERAVLTGHDDTVWHGRFSPDGTLLATTSKD 471

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKDGDTGSKLYSI 421
                + +       ERL++     + P     T+S  G  L        D  ++L+SI
Sbjct: 472 TT---VRLWDVASGSERLVLRG--HEEPVSWGTTFSSDGAILA---TVSADRTARLWSI 522



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 62/187 (33%), Gaps = 21/187 (11%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS----PDSSQIV 317
           +  FS +    L+++ +D    ++  D+ S     +      +    +S    P+     
Sbjct: 203 SAAFSRD-NSVLVTISRDRTTRLW--DVASGQQRAVLKG---HTEPVWSVAISPNGEHFA 256

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S       + +       Q  +        +   +SP G  IA T   G    +    
Sbjct: 257 TAS---WDRTIRLWDITTGRQVAVLTGHLGPAWFVTFSPDGTRIASTSADGTA-RLWDSA 312

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               Q  L    + +   ++SP G  L  + K   DT + L+     GR   ++      
Sbjct: 313 TGRQQAVLAGHKNTVYWGSFSPDGTLLATTSK---DTTACLWDA-TTGRQRAVLT---GH 365

Query: 438 SDPQWVG 444
           +DP W G
Sbjct: 366 TDPVWAG 372


>gi|297204688|ref|ZP_06922085.1| WD repeat protein [Streptomyces sviceus ATCC 29083]
 gi|297148756|gb|EDY54791.2| WD repeat protein [Streptomyces sviceus ATCC 29083]
          Length = 1167

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 96/293 (32%), Gaps = 21/293 (7%)

Query: 145  FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANI 203
              S  +  +I  T +  +  S+TG +G   +         +V+G         +    + 
Sbjct: 818  TGSHVALVRIWDTATGQVVHSLTGHRGAVLTVAFAPDGARLVTGGNDRIALAWEPTAGST 877

Query: 204  RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                  R + L     SPN   V  ++ D      V + D       + +   +  +LA 
Sbjct: 878  PVPLTGRAEQLHAVVVSPNGSCVVTSSRDT----AVPIWDPVTGDVTRSLRGHQGAVLAV 933

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDR 322
             FS +G R   S   D  M ++  ++++  T R        + A ++SPD +++   S  
Sbjct: 934  AFSPDGTRLATSSS-DRTMRLW--NMETGETVRTLRGRTDQLHALAFSPDGARLATGSS- 989

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                 + +   +     RI            + P G  +A          + +       
Sbjct: 990  --DTTVRLWDPSTGAMVRILNGHRGPVRALAFHPDGTFLATASHDRT---VRIWDPSTGD 1044

Query: 383  ER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                L+     L    +SP GR L        DT  +L+     G    +++ 
Sbjct: 1045 VVRSLVGHTDQLHTVAFSPDGRLLA---TGSSDTTVRLWDAS-TGAMVRMLSG 1093



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 79/231 (34%), Gaps = 14/231 (6%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             + +     ++ + + +          R   L    FSP+  ++A  + D      V L 
Sbjct: 941  RLATSSSDRTMRLWNMETGETVRTLRGRTDQLHALAFSPDGARLATGSSDT----TVRLW 996

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTL 301
            D       + +   R  + A  F  +G     +   D  + I+  D  +    R L    
Sbjct: 997  DPSTGAMVRILNGHRGPVRALAFHPDGTFLA-TASHDRTVRIW--DPSTGDVVRSLVGHT 1053

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                + ++SPD   +   S       + +  ++     R+            +SP G  +
Sbjct: 1054 DQLHTVAFSPDGRLLATGSS---DTTVRLWDASTGAMVRMLSGHRGPVRAVAFSPDGSCL 1110

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            A +  + E   I      G    ++  DS + + +WS  GR ++F+    G
Sbjct: 1111 A-SGGADETIRIHA-PASGEALTMMRTDSAVWSCSWSADGR-VLFAGTTAG 1158



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 64/186 (34%), Gaps = 13/186 (6%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + +   R  + A  +S +G R   +  +D  + ++S  +   A   LT       + ++S
Sbjct: 574 RTLTGHRGPVHAVAYSPDGVRIA-TSSRDTTVRMWS-SVTGEALHTLTGHQGPVRAVAFS 631

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +V    R+   +++   +      R  +  +       +SP G L+A        
Sbjct: 632 PDGRLLV-TGGRDATARIW--DATTGQPVRTMRGHDGPVLAVAFSPDGSLLATGSSDTT- 687

Query: 371 FAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             + +      +           + A  +   G  L        DT ++L+ +   G + 
Sbjct: 688 --VRIWDPATGEVLHTASGHGGLVSAVVFDRDGSRLA---SGGADTTARLWDLTSPGPDR 742

Query: 429 TLINTP 434
              + P
Sbjct: 743 RPGDGP 748



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/310 (15%), Positives = 94/310 (30%), Gaps = 42/310 (13%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANI 203
            SS  +  ++  +++ +   ++TG +G   +        + V+G    +  + D      
Sbjct: 597 TSSRDTTVRMWSSVTGEALHTLTGHQGPVRAVAFSPDGRLLVTGGRDATARIWDATTGQP 656

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                  D  +    FSP+   +A  + D      V + D               ++ A 
Sbjct: 657 VRTMRGHDGPVLAVAFSPDGSLLATGSSDT----TVRIWDPATGEVLHTASGHGGLVSAV 712

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-------------NATERLTNTLFINISASYS 310
            F  +G R   S   D    ++ +                  A+  LT       + +++
Sbjct: 713 VFDRDGSRLA-SGGADTTARLWDLTSPGPDRRPGDGPPRALRASRVLTGHRGQVRALAFT 771

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD S+++  S     ++   +   G        D         +SP G  +A        
Sbjct: 772 PDGSRLLSCS----NDRTLRIWGPGGAVAV--HDLSGVVRAAGFSPDGTRLATGSHVA-- 823

Query: 371 FAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY--------S 420
             + +      Q    L      +    ++P G  L+      G+    L          
Sbjct: 824 -LVRIWDTATGQVVHSLTGHRGAVLTVAFAPDGARLV----TGGNDRIALAWEPTAGSTP 878

Query: 421 IDLNGRNETL 430
           + L GR E L
Sbjct: 879 VPLTGRAEQL 888



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 82/256 (32%), Gaps = 34/256 (13%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    +SP+  ++A ++ D      V +  +    A   +   +  + A  
Sbjct: 574 RTLTGHRGPVHAVAYSPDGVRIATSSRDT----TVRMWSSVTGEALHTLTGHQGPVRAVA 629

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G R L++  +D    I+  D  +    R +       ++ ++SPD S +   S   
Sbjct: 630 FSPDG-RLLVTGGRDATARIW--DATTGQPVRTMRGHDGPVLAVAFSPDGSLLATGSS-- 684

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + +      +    +          V+   G  +A +  +     +  +   G   
Sbjct: 685 -DTTVRIWDPATGEVLHTASGHGGLVSAVVFDRDGSRLA-SGGADTTARLWDLTSPGPDR 742

Query: 384 R--------------LLVEDSNLQAPTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNG 425
           R              L      ++A  ++P G  L+        +    G  +   DL+G
Sbjct: 743 RPGDGPPRALRASRVLTGHRGQVRALAFTPDGSRLLSCSNDRTLRIWGPGGAVAVHDLSG 802

Query: 426 RNETLINTPAYASDPQ 441
               ++    ++ D  
Sbjct: 803 ----VVRAAGFSPDGT 814



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/303 (14%), Positives = 93/303 (30%), Gaps = 43/303 (14%)

Query: 163 YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            +++TG +G  ++         + +     ++ +         +        +    FSP
Sbjct: 573 MRTLTGHRGPVHAVAYSPDGVRIATSSRDTTVRMWSSVTGEALHTLTGHQGPVRAVAFSP 632

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +              + D    +  + +      +LA  FS +G     +   D  
Sbjct: 633 DGRLLV----TGGRDATARIWDATTGQPVRTMRGHDGPVLAVAFSPDGSLLA-TGSSDTT 687

Query: 282 MDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK- 339
           + I+  D  +       +     +SA  +  D S++      +   +L+ + S G D++ 
Sbjct: 688 VRIW--DPATGEVLHTASGHGGLVSAVVFDRDGSRLA-SGGADTTARLWDLTSPGPDRRP 744

Query: 340 -----------RISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVMKKDGSQ 382
                      R+            ++P G  +            G   A+ V    G  
Sbjct: 745 GDGPPRALRASRVLTGHRGQVRALAFTPDGSRLLSCSNDRTLRIWGPGGAVAVHDLSGV- 803

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                    ++A  +SP G  L         +  DT +      L G    ++ T A+A 
Sbjct: 804 ---------VRAAGFSPDGTRLATGSHVALVRIWDTATGQVVHSLTGHRGAVL-TVAFAP 853

Query: 439 DPQ 441
           D  
Sbjct: 854 DGA 856



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 55/197 (27%), Gaps = 30/197 (15%)

Query: 118  KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            +          RLWD      +  +         R +A               G F    
Sbjct: 983  RLATGSSDTTVRLWDPSTGAMV--RILNGHRGPVRALA-----------FHPDGTFL--- 1026

Query: 178  LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
                    +     ++ + D    ++          L    FSP+ + +A  + D     
Sbjct: 1027 -------ATASHDRTVRIWDPSTGDVVRSLVGHTDQLHTVAFSPDGRLLATGSSDT---- 1075

Query: 238  RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             V L D       + +   R  + A  FS +G     S   DE + I+       A   +
Sbjct: 1076 TVRLWDASTGAMVRMLSGHRGPVRAVAFSPDGSCLA-SGGADETIRIH-APASGEALTMM 1133

Query: 298  TNTLFINISASYSPDSS 314
                 +  S S+S D  
Sbjct: 1134 RTDSAV-WSCSWSADGR 1149


>gi|217974238|ref|YP_002358989.1| peptidase S41 [Shewanella baltica OS223]
 gi|217499373|gb|ACK47566.1| peptidase S41 [Shewanella baltica OS223]
          Length = 1094

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 114/297 (38%), Gaps = 36/297 (12%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---- 228
           +  R+ F+S+S  +      L  M  DG++ + LT  +D  +   +   +Q KV +    
Sbjct: 226 WQDRLYFISDSDGNDN----LWSMALDGSDAKQLTQFKDWQVRGAQM--DQGKVVFQQGA 279

Query: 229 --ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN----GKRALISVQKDEAM 282
               +D        +         +R  ++    +    S++    G + +I+ +     
Sbjct: 280 DIHVFDIAAAKDALVNIELTSDFAQRREHWVKDPMDYASSTDLALAGDKVVITAR----S 335

Query: 283 DIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKR 340
            +    +  +   ++     +    A  S D   +   SD  G+++++   ++G S  K+
Sbjct: 336 HVAIAGVDGSRLVQVALPGTYRVREAILSQDGKSVYAISDMTGQQEIWQFPADGSSGAKQ 395

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
           +++D          S  G  IA     G    + ++    +  + ++ +     P     
Sbjct: 396 LTKDGHTLRMSLNLSNDGRFIAHDDNDG---NVWLLDLKKNTNQKIITNGEGLGPYADIR 452

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLIN------TPAYASDPQWVGFM 446
           WS   R +  ++ + G    ++    ++  + ETL +      +P ++SD QW+ F+
Sbjct: 453 WSGDSRFIALTKSEIGKQRPQIVLYSVDENKAETLTSDKYESYSPTFSSDGQWLYFL 509



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 59/154 (38%), Gaps = 10/154 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLT-NTLFINISASYSPDSSQIVFESDR 322
            S +GK            +I+      +   ++LT +   + +S + S D     F +  
Sbjct: 363 LSQDGKSVYAISDMTGQQEIWQFPADGSSGAKQLTKDGHTLRMSLNLSNDGR---FIAHD 419

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKK 378
           +    ++++    +  ++I  + E    Y D  WS     IA TK     ++  I +   
Sbjct: 420 DNDGNVWLLDLKKNTNQKIITNGEGLGPYADIRWSGDSRFIALTKSEIGKQRPQIVLYSV 479

Query: 379 DGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
           D ++   L  D     +PT+S  G+ L F   + 
Sbjct: 480 DENKAETLTSDKYESYSPTFSSDGQWLYFLSNRQ 513



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 102/283 (36%), Gaps = 58/283 (20%)

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKF 144
           S     ++   + +F+DW   GAQ+   G+V+ +    + V    +D+   K  ++  + 
Sbjct: 244 SMALDGSDAKQLTQFKDWQVRGAQMD-QGKVVFQQGADIHV----FDIAAAKDALVNIEL 298

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF-----VSESVVSGII---------- 189
            S  A  R+  H + D +  + + +      +++      V+ + V G            
Sbjct: 299 TSDFAQRRE--HWVKDPMDYASSTDLALAGDKVVITARSHVAIAGVDGSRLVQVALPGTY 356

Query: 190 ----------------------KNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKV 226
                                 +  +     DG+   + LT     +      S + + +
Sbjct: 357 RVREAILSQDGKSVYAISDMTGQQEIWQFPADGSSGAKQLTKDGHTLRMSLNLSNDGRFI 416

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDE-- 280
           A+   D      V+L+D + +   K I N     L P    R+S + +   ++  +    
Sbjct: 417 AHDDNDG----NVWLLDLKKNTNQKIITNGEG--LGPYADIRWSGDSRFIALTKSEIGKQ 470

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
              I    +  N  E LT+  + + S ++S D   + F S+R+
Sbjct: 471 RPQIVLYSVDENKAETLTSDKYESYSPTFSSDGQWLYFLSNRQ 513



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 70/208 (33%), Gaps = 20/208 (9%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              T   +A  R+ +  +  L    S++GK        + A ++Y + +     +R++  
Sbjct: 53  WTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVYVIPVAGGVAKRVSFE 112

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   ++P    +       G    ++++S        +    A   + V   + + 
Sbjct: 113 NSRVRVQGWTPKGEILYSTDSGFGPANNWMLRSVDPKTFTTTDLPLADAVEGVIDDRNEY 172

Query: 361 IAFTKF-------------SGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSL 404
           + FT+F              G K  +   K     E  L+    D +++ P        L
Sbjct: 173 VYFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQD--RL 230

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            F    DG     L+S+ L+G +   + 
Sbjct: 231 YFISDSDG--NDNLWSMALDGSDAKQLT 256



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 51/115 (44%), Gaps = 10/115 (8%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +  + + + D    +++  L   A  RLT+     + A+ S D   + + ++ EG  ++Y
Sbjct: 42  QTLVFTAEGD----LWTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVY 97

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG----EKFAIGVMKKDG 380
           V+   G   KR+S +  +      W+P+G+ I ++  SG      + +  +    
Sbjct: 98  VIPVAGGVAKRVSFE-NSRVRVQGWTPKGE-ILYSTDSGFGPANNWMLRSVDPKT 150



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 67/213 (31%), Gaps = 25/213 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G        S          S + + VAY   + E    VY++        KR+    S 
Sbjct: 58  GQKAATRLTSLPAEELGATISADGKWVAYVA-NYEGASEVYVIPV-AGGVAKRVSFENSR 115

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQI 316
           +    ++  G   L S           + L+S   +  T T   L   +       +  +
Sbjct: 116 VRVQGWTPKG-EILYSTDSGFGPANNWM-LRSVDPKTFTTTDLPLADAVEGVIDDRNEYV 173

Query: 317 VFES------------DREG-KEQLYVMQSNG-SDQKRISQDKEASYFDPV-WSPQGDLI 361
            F               R G K +L+  +    ++ + +S   + S   P+ W    D +
Sbjct: 174 YFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQ---DRL 230

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            F   S     +  M  DGS  + L +  + Q 
Sbjct: 231 YFISDSDGNDNLWSMALDGSDAKQLTQFKDWQV 263


>gi|291515909|emb|CBK65119.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Alistipes
           shahii WAL 8301]
          Length = 711

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 44/115 (38%), Gaps = 8/115 (6%)

Query: 258 SMILAPRFSSNGKRALIS------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           S       S +G+  L         +      I   D+ S A   LT+    ++S  +S 
Sbjct: 50  SRAGGSSLSPDGRTLLYQQTDYNMAENRGVTTIRVEDMDSKAVTCLTDFTSNSLSPKWSA 109

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFT 364
           D   I F SDR G  Q++ M ++G D  +I+   +          SP G  I + 
Sbjct: 110 DGRHIYFLSDRGGSMQVWRMNASGGDATQITGSGDGVPDVEGFGVSPDGKHIWWV 164



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 89/283 (31%), Gaps = 80/283 (28%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR----IGNFRSMILAPRFSSNGKRALIS 275
           SP+ + + Y   D        +   R++    +    + +F S  L+P++S++G+     
Sbjct: 58  SPDGRTLLYQQTDYNMAENRGVTTIRVEDMDSKAVTCLTDFTSNSLSPKWSADGRHIYFL 117

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLF--INISAS-YSPDSSQIVF-----ESDREGKEQ 327
             +  +M ++ ++       ++T +     ++     SPD   I +      +DR   + 
Sbjct: 118 SDRGGSMQVWRMNASGGDATQITGSGDGVPDVEGFGVSPDGKHIWWVQTVRTADRRSSDI 177

Query: 328 LYVMQSN--------------------------GSDQKRISQDK-----EASYFDP---- 352
              M  +                          G   K +         +A +  P    
Sbjct: 178 YKDMDKSKARIYDDLMARHWDYWDEGEYRHIFVGELSKGVVTGGRDIMPDAQWDAPLAPY 237

Query: 353 ------VWSPQGDLIAFT--KFSGEKF------AIGVMKKDGSQERLLVEDSNLQ----- 393
                  W+  G ++A+T    +G  +       I V   +    + + + +N       
Sbjct: 238 FDMAEIAWNNAGTMLAYTCKPLTGTAYAVSTDSDIFVYDLESGATQNICKPTNFNTGKPV 297

Query: 394 -----------APTWSPSGRSLIFSRKKDGDTGS---KLYSID 422
                       P WSP    + F  ++     S   +L+  D
Sbjct: 298 NDQAAMVGYDKYPVWSPDDSKIAFLSQRRAGNESDKARLFVYD 340



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 94/301 (31%), Gaps = 81/301 (26%)

Query: 168 GEKGDFNSR-ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF--SPNQQ 224
             K   + R I F+S+   S      +  M+  G +   +T S D +     F  SP+ +
Sbjct: 104 SPKWSADGRHIYFLSDRGGS----MQVWRMNASGGDATQITGSGDGVPDVEGFGVSPDGK 159

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNF---------------------------- 256
            + +         R   +   +D++  RI +                             
Sbjct: 160 HIWWVQTVRTADRRSSDIYKDMDKSKARIYDDLMARHWDYWDEGEYRHIFVGELSKGVVT 219

Query: 257 RSMILAP-----------------RFSSNGKRALIS--------VQKDEAMDIYSVDLQS 291
               + P                  +++ G     +               DI+  DL+S
Sbjct: 220 GGRDIMPDAQWDAPLAPYFDMAEIAWNNAGTMLAYTCKPLTGTAYAVSTDSDIFVYDLES 279

Query: 292 NATERL---TNTL------------FINISASYSPDSSQIVFESDR-----EGKEQLYVM 331
            AT+ +   TN                +    +SPD S+I F S R       K +L+V 
Sbjct: 280 GATQNICKPTNFNTGKPVNDQAAMVGYDKYPVWSPDDSKIAFLSQRRAGNESDKARLFVY 339

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             + ++ + ++ D + +  + VWS   DLI F         I  +     +  ++    +
Sbjct: 340 DCHTAEMQDLTADFDYNAQNVVWS-GNDLIYFIAPIEATHQICRVAPSVGEVEVITRGDH 398

Query: 392 L 392
            
Sbjct: 399 D 399



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 63/198 (31%), Gaps = 35/198 (17%)

Query: 218 RFSPNQQKVAYA---------TYDDEDILRVYLMDTRIDRAPKRIGNFR----------- 257
            ++     +AY              +  + VY +++   +   +  NF            
Sbjct: 244 AWNNAGTMLAYTCKPLTGTAYAVSTDSDIFVYDLESGATQNICKPTNFNTGKPVNDQAAM 303

Query: 258 -SMILAPRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                 P +S +  +     Q+      +   ++  D  +   + LT     N       
Sbjct: 304 VGYDKYPVWSPDDSKIAFLSQRRAGNESDKARLFVYDCHTAEMQDLTADFDYNAQNVVWS 363

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFS 367
            +  I F +  E   Q+  +  +  + + I++     +    ++  G+ IA        +
Sbjct: 364 GNDLIYFIAPIEATHQICRVAPSVGEVEVITR---GDHDINAFTMAGERIAAEMCTISMA 420

Query: 368 GEKFAIGVMKKDGSQERL 385
            E F I    +DGS  ++
Sbjct: 421 TEFFEIN--PEDGSLAQI 436


>gi|332710678|ref|ZP_08430621.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332350554|gb|EGJ30151.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1181

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 92/256 (35%), Gaps = 19/256 (7%)

Query: 172  DFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            D+   I F S   ++ SG    ++ V D    +     P     ++   FS +++ +A  
Sbjct: 860  DWAMPIAFSSDGHTLASGSNDYTVRVWDYGTGSCIRTLPGHTDFVYSVAFSSDRKTLASG 919

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            + D+     + L D       + +      + +  FSS+GK    S   D  + ++  D+
Sbjct: 920  STDN----TIRLWDVSTGCCIRTLHGHTDWVFSVAFSSDGKTLA-SGSADHTVKLW--DV 972

Query: 290  QSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             +    R T     +   S ++S D   +   S       + +          I +    
Sbjct: 973  STGHCIR-TFQEHTDRLRSVAFSNDGKTLASGS---ADHTVRLWNCETGSCVGILRGHSN 1028

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                  +SP G L+A +  +     +  +++    + L    + + +  +SP G++L   
Sbjct: 1029 RVHSVAFSPNGQLLA-SGSTDHTVKLWDIRESKCCKTLTGHTNWVLSVAFSPDGKTL--- 1084

Query: 408  RKKDGDTGSKLYSIDL 423
                 D   +L+ +  
Sbjct: 1085 SSGSADKTVRLWDVST 1100



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 74/221 (33%), Gaps = 17/221 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           L      ++ +  FS + + +A  + D      V   D    +  K      + + +  F
Sbjct: 602 LCEGHTNLVRDLAFSHDGKILASCSADH----TVKFWDVSDGKCLKTCTGHTNEVCSVAF 657

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREG 324
           S +GK  + +   D  + ++  D+++    +  T       S ++SPD   I   SD   
Sbjct: 658 SPDGKTLV-TSSGDHTLKVW--DIKTAECLKTCTGHSSWVRSVAFSPDGKTIASSSD--- 711

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              +    S   +                ++  G  +A    SG+          G   R
Sbjct: 712 DHTVKFWDSGTGECLNTGTGHRDCVGSVAFTSDGKTLA--SGSGDHTVKFWEVSTGRCLR 769

Query: 385 LLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 S + +  +SP G++L       GD   +L+    N
Sbjct: 770 TYTGHSSGVYSVAFSPDGKTLA---SGGGDHIVRLWDTSTN 807



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 83/257 (32%), Gaps = 20/257 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++V+    ++L V D   A            +    FSP+ + +A ++ D      V  
Sbjct: 662 KTLVTSSGDHTLKVWDIKTAECLKTCTGHSSWVRSVAFSPDGKTIASSSDDH----TVKF 717

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D+            R  + +  F+S+GK    S   D  +  + V          T   
Sbjct: 718 WDSGTGECLNTGTGHRDCVGSVAFTSDGKTLA-SGSGDHTVKFWEVS-TGRCLRTYTGHS 775

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++SPD   +       G   + +  ++ ++  +         F   +SP G+ +
Sbjct: 776 SGVYSVAFSPDGKTLA---SGGGDHIVRLWDTSTNECLKTLHGHSNQVFSVAFSPYGNTL 832

Query: 362 AFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLY 419
                      + +      Q  +    +++   P  +S  G +L        D   +++
Sbjct: 833 VCVSLDQ---KVKLWDCQTGQCLKTWYGNTDWAMPIAFSSDGHTLA---SGSNDYTVRVW 886

Query: 420 SIDLNGRNETLINTPAY 436
                G    +   P +
Sbjct: 887 DY---GTGSCIRTLPGH 900



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 94/285 (32%), Gaps = 43/285 (15%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLW+V   K ++  +        R +A +    I  S +    D   +   VS       
Sbjct: 590 RLWEVPSGKLVLLCE--GHTNLVRDLAFSHDGKILASCSA---DHTVKFWDVS------- 637

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                     DG  ++  T   +++     FSP+ + +  ++ D      + + D +   
Sbjct: 638 ----------DGKCLKTCTGHTNEVCSV-AFSPDGKTLVTSSGDH----TLKVWDIKTAE 682

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINI 305
             K      S + +  FS +GK    S   D  +  +     S   E L   T       
Sbjct: 683 CLKTCTGHSSWVRSVAFSPDGKTIA-SSSDDHTVKFW----DSGTGECLNTGTGHRDCVG 737

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S +++ D   +   S   G   +   + +     R      +  +   +SP G  +A   
Sbjct: 738 SVAFTSDGKTLASGS---GDHTVKFWEVSTGRCLRTYTGHSSGVYSVAFSPDGKTLA--- 791

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSR 408
             G    + +     ++    +   + Q  +  +SP G +L+   
Sbjct: 792 SGGGDHIVRLWDTSTNECLKTLHGHSNQVFSVAFSPYGNTLVCVS 836



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 86/279 (30%), Gaps = 36/279 (12%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        RLWDV     I             +  H  +D ++       G     
Sbjct: 914  KTLASGSTDNTIRLWDVSTGCCI-------------RTLHGHTDWVFSVAFSSDG----- 955

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 +++ SG   +++ + D    +           L    FS + + +A  + D    
Sbjct: 956  -----KTLASGSADHTVKLWDVSTGHCIRTFQEHTDRLRSVAFSNDGKTLASGSADH--- 1007

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              V L +         +    + + +  FS NG+    S   D  + ++ +  +S   + 
Sbjct: 1008 -TVRLWNCETGSCVGILRGHSNRVHSVAFSPNGQLLA-SGSTDHTVKLWDI-RESKCCKT 1064

Query: 297  LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            LT      +S ++SPD   +   S     + + +   +  +   I            +S 
Sbjct: 1065 LTGHTNWVLSVAFSPDGKTL---SSGSADKTVRLWDVSTGECLDICTGHSHLVSSVAFSV 1121

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQA 394
             G ++A          + +   +  +  ++L      +A
Sbjct: 1122 DGQIMASGSQDQT---VRLKDVETGECLKILKTPRLYEA 1157



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 57/195 (29%), Gaps = 12/195 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +   +     + E I    +     D            IL+  FS +GK    +   D
Sbjct: 528 SYDFSNLTVWQANLEGIKLHNVNFADADLTSSVFTETLGNILSAAFSPDGKLLA-TCDTD 586

Query: 280 EAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             + ++ V   S     L      +    ++S D   +   S       +     +    
Sbjct: 587 WKVRLWEVP--SGKLVLLCEGHTNLVRDLAFSHDGKILASCS---ADHTVKFWDVSDGKC 641

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPT 396
            +             +SP G  +  +        + V     ++  +      S +++  
Sbjct: 642 LKTCTGHTNEVCSVAFSPDGKTLVTSS---GDHTLKVWDIKTAECLKTCTGHSSWVRSVA 698

Query: 397 WSPSGRSLIFSRKKD 411
           +SP G+++  S    
Sbjct: 699 FSPDGKTIASSSDDH 713


>gi|153006398|ref|YP_001380723.1| protein kinase [Anaeromyxobacter sp. Fw109-5]
 gi|152029971|gb|ABS27739.1| protein kinase [Anaeromyxobacter sp. Fw109-5]
          Length = 1100

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 86/262 (32%), Gaps = 14/262 (5%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             VV+     +  +    G     +     ++L      P+++++  A+ D      V L 
Sbjct: 763  RVVTAGHDGTARIWPVHGEGAPLVIADPGRVLHAADLDPDERRLVTASEDG----VVRLW 818

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            D R  R  + +    S +L+  FS +G R   S   D  + ++ V         LT    
Sbjct: 819  DARDGRLLRELRGHTSSVLSAAFSPDGSRIA-SASLDGTVRVWPV-AGDAPPVVLTGHEK 876

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S  ++PD   +V  S  +   +++    +GS  + I    E S F    +P G  + 
Sbjct: 877  GITSVCWTPDGRAVVSASQLDATVRIW--PLDGSAARVI--RAERSVFRATVTPDGTRLL 932

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              +       +  +   G    +      L +   SP G  +  +     D   ++Y   
Sbjct: 933  VAE-ENGPLHVYRLDTLGELPPIAALPEGLFSAAASPDGARIALTSH---DGIVRVYRAS 988

Query: 423  LNGRNETLINTPAYASDPQWVG 444
              G    L           +  
Sbjct: 989  GEGEPLVLRGHDGSVGHATFSP 1010



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 91/227 (40%), Gaps = 15/227 (6%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            RDG  +R L       +    FSP+  ++A A+ D      V +     D  P  +    
Sbjct: 821  RDGRLLREL-RGHTSSVLSAAFSPDGSRIASASLDG----TVRVWPVAGDAPPVVLTGHE 875

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              I +  ++ +G+  + + Q D  + I+   L  +A   +     +   A+ +PD ++++
Sbjct: 876  KGITSVCWTPDGRAVVSASQLDATVRIW--PLDGSAARVIRAERSV-FRATVTPDGTRLL 932

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              ++  G   +Y + + G +   I+   E   F    SP G  IA T   G    +    
Sbjct: 933  -VAEENGPLHVYRLDTLG-ELPPIAALPEG-LFSAAASPDGARIALTSHDG-IVRVYRAS 988

Query: 378  KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +G    L   D ++   T+SP G  L  +     D  ++++ +  +
Sbjct: 989  GEGEPLVLRGHDGSVGHATFSPDGSELATASV---DGTARVWPVSWD 1032



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 87/225 (38%), Gaps = 15/225 (6%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G +     ++  D A         D  +    ++P+  ++A  + D      + + D R 
Sbjct: 519 GALDGRAWLVALDAARPAQPLV-HDGAVLALAYAPDGARLATGSGDG----HLRIFDARS 573

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               +R+      + A  +S +G+    +  +D    ++  D +  A    T      + 
Sbjct: 574 GALLERVTLPGGAVFALAWSRDGRAIA-TGSEDGVARLFGADGRPRAAFGATGAPLSTV- 631

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPDS +I   + ++G  ++Y + S   + +   +    S  D  +SP G  +     
Sbjct: 632 -AFSPDSLRIA-TASQDGSARVYPIASPAQEVRL--RGHRGSVSDARFSPDGRRVLTVSG 687

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            G    + V   DG    +++        ++SP G  + F+R KD
Sbjct: 688 DGT---VRVWPADGEGPTMVLRGHPAFEASFSPDGARI-FTRGKD 728



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 86/280 (30%), Gaps = 49/280 (17%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-------------------D 235
           +   DG     +  +    +    F+P+  +V  A++D E                    
Sbjct: 443 ISSADGRGGVRVLTAPGGRVNAVAFTPDGTRVVAASHDGEVRVFRADGSSAPLLLQAGSS 502

Query: 236 ILRVYLMDTRIDR------------------APKRIGNFRSMILAPRFSSNGKRALISVQ 277
              V  +D                        P +       +LA  ++ +G R   +  
Sbjct: 503 PHAVLAVDPGGRTAAVGALDGRAWLVALDAARPAQPLVHDGAVLALAYAPDGARLA-TGS 561

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + I+  D +S A  ER+T       + ++S D   I      +G  +L+       
Sbjct: 562 GDGHLRIF--DARSGALLERVTLPGGAVFALAWSRDGRAIA-TGSEDGVARLFGAD---G 615

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             +       A      +SP    IA     G      +      + RL     ++    
Sbjct: 616 RPRAAFGATGAPLSTVAFSPDSLRIATASQDGSARVYPIASPA-QEVRLRGHRGSVSDAR 674

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           +SP GR ++      GD   +++  D  G    L   PA+
Sbjct: 675 FSPDGRRVL---TVSGDGTVRVWPADGEGPTMVLRGHPAF 711



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 86/241 (35%), Gaps = 33/241 (13%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWD +D + +   +            HT S  +  +     G            + S  
Sbjct: 816  RLWDARDGRLLRELR-----------GHTSS--VLSAAFSPDG----------SRIASAS 852

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  ++ V    G     +    ++ +    ++P+ + V  A+      L   +    +D 
Sbjct: 853  LDGTVRVWPVAGDAPPVVLTGHEKGITSVCWTPDGRAVVSASQ-----LDATVRIWPLDG 907

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            +  R+      +     + +G R L++ +++  + +Y +D        +        SA+
Sbjct: 908  SAARVIRAERSVFRATVTPDGTRLLVA-EENGPLHVYRLDTL-GELPPIAALPEGLFSAA 965

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             SPD ++I   S       + V +++G  +  + +  + S     +SP G  +A     G
Sbjct: 966  ASPDGARIALTSH---DGIVRVYRASGEGEPLVLRGHDGSVGHATFSPDGSELATASVDG 1022

Query: 369  E 369
             
Sbjct: 1023 T 1023



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 69/211 (32%), Gaps = 19/211 (9%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKR--------ALISVQKDEAMDIYSVDLQSNA 293
                +  P  +       L    S +G++               +  + I S D +   
Sbjct: 393 QRILAEPIPVAVLEHPPGGLGLAISPDGRQVAVGAAAARAGGGAAETGVAISSADGRGG- 451

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              LT       + +++PD +++V  S      ++ V +++GS    + Q   + +    
Sbjct: 452 VRVLTAPGGRVNAVAFTPDGTRVVAASH---DGEVRVFRADGSSAPLLLQAGSSPHAVLA 508

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             P G   A     G  + + +        + LV D  + A  ++P G  L       GD
Sbjct: 509 VDPGGRTAAVGALDGRAWLVALDAA--RPAQPLVHDGAVLALAYAPDGARLA---TGSGD 563

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDP-QWV 443
              +++    +G     +  P  A     W 
Sbjct: 564 GHLRIFDAR-SGALLERVTLPGGAVFALAWS 593


>gi|73670802|ref|YP_306817.1| hypothetical protein Mbar_A3364 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397964|gb|AAZ72237.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 551

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 70/397 (17%), Positives = 136/397 (34%), Gaps = 61/397 (15%)

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           S+DL     FN+   +   Q       +    +W+  G  +LVT            V+  
Sbjct: 27  SEDLS----FNVTPLNKILQIEDGF--VVTSTEWSPDGQYLLVTCS-KMNSPLNYIVKHY 79

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L D           +  + +         ++ I Q+     GD   +I F    +     
Sbjct: 80  LLDTNSH-TFGEINYGINGSD--------TNGILQAKWTPSGD---KIYFGVSRIEETNS 127

Query: 190 KNSLCVMDRDGANIRYLTP------------SRDQILFEPRFSPNQQKVAYATYDDE-DI 236
            +   + + DG N+R +                        ++ +  K+ +         
Sbjct: 128 GHCYIICNPDGTNLRCIGTNYTDLSYIIKNLGSIGFQRNLNWNQDSNKIVFEWEKPGNHS 187

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRAL-----ISVQKDEAMDIYSVDLQ 290
             VY+ D +     + +         P  + S+    +     + +  DE   I +   +
Sbjct: 188 PGVYIADGKGTIISELLSATYPQ---PALYDSDKVFIVKDEGTVVLANDEGDLIQTFQPE 244

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +              + S SP+  +I+F   S      Q YV   +GS+ K      E  
Sbjct: 245 NKDERY--------CAFSLSPNRKKIMFAVGSSDSYNLQTYVSNIDGSNLKGNISYNENL 296

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           + +  W P G L+       +   + +++ D + +RLL + +  ++  W P G+ ++F  
Sbjct: 297 WANESWQPNGSLLLV----NQNRNLYIVEGDENNKRLLYKGNASES-QWFPDGKKILFVE 351

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
                 G+KLYSID++G N + I +        W  F
Sbjct: 352 N-----GNKLYSIDIDGTNLSFITSFGPTYSYTWKYF 383



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 87/250 (34%), Gaps = 40/250 (16%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +   ++D+       SPN++K+ +A    +   L+ Y+ +         I    ++    
Sbjct: 241 FQPENKDERYCAFSLSPNRKKIMFAVGSSDSYNLQTYVSNIDGSNLKGNISYNENLWANE 300

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +  NG   L+    ++  ++Y V+   N    L         + + PD  +I+F    E
Sbjct: 301 SWQPNGSLLLV----NQNRNLYIVEGDENNKRLL--YKGNASESQWFPDGKKILFV---E 351

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYF---------DPVWSPQGDLIAFTKF-------- 366
              +LY +  +G++   I+       +             SP G+ IAF           
Sbjct: 352 NGNKLYSIDIDGTNLSFITSFGPTYSYTWKYFNEGQHFSISPSGNTIAFMSAFDSSTGKM 411

Query: 367 --SGEKFAI------GVMKKDGSQERLLV---EDSNLQAPTWSPSGRS--LIFSRKKDGD 413
                 F I       ++  +GS    +    +        WSP G+   +  ++  +G 
Sbjct: 412 IEDNNIFNIEIAAPLFIINSNGSNLTQVTPAVKGIFDTCINWSPDGKQFTIGSTKYSNGH 471

Query: 414 TGSKLYSIDL 423
             S L  +D 
Sbjct: 472 GNSSLVKLDT 481



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 81/237 (34%), Gaps = 42/237 (17%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R   +     S        V + DG+N++      + +     + PN   +      +  
Sbjct: 259 RKKIMFAVGSSDSYNLQTYVSNIDGSNLKGNISYNENLWANESWQPNGSLLLVNQNRN-- 316

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                L     D   KR+  ++      ++  +GK+ L     +    +YS+D+      
Sbjct: 317 -----LYIVEGDENNKRLL-YKGNASESQWFPDGKKILFVENGN---KLYSIDIDGTNLS 367

Query: 296 RLTNTLFINISASY-----------SPDSSQIVFES---DREGKEQ-------------L 328
            +T +     S ++           SP  + I F S      GK               L
Sbjct: 368 FIT-SFGPTYSYTWKYFNEGQHFSISPSGNTIAFMSAFDSSTGKMIEDNNIFNIEIAAPL 426

Query: 329 YVMQSNGSDQKRISQDKEASYFDPV-WSPQGDL--IAFTKFSGEKFAIGVMKKDGSQ 382
           +++ SNGS+  +++   +  +   + WSP G    I  TK+S       ++K D   
Sbjct: 427 FIINSNGSNLTQVTPAVKGIFDTCINWSPDGKQFTIGSTKYSNGHGNSSLVKLDTKN 483


>gi|73669318|ref|YP_305333.1| hypothetical protein Mbar_A1812 [Methanosarcina barkeri str.
           Fusaro]
 gi|72396480|gb|AAZ70753.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 575

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 68/381 (17%), Positives = 128/381 (33%), Gaps = 57/381 (14%)

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
                    +  W+  G  +L+T          +   + L D K  + +    +     +
Sbjct: 59  PKEEGFSVSYASWSPDGQYLLITSSKSISLSHSIHKHY-LLDTKS-RTLGEIDYGVKEFN 116

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-- 208
                       Y     E      +I F    V          + + DG N++ +    
Sbjct: 117 -----------SYSIPGAEWSPSGDKIYFGVSKVERTNTGYCFVICNPDGTNLKCIGTNY 165

Query: 209 ----------SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
                            + ++SP+  K+ +   + E+        +R     + + +   
Sbjct: 166 TDLSSILENIGNIGFQRKLKWSPDSSKITFEWENPENHSTKVYTASRNGTNARELSSATY 225

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDL--QSNATERLTNTLFINIS----ASYSPD 312
               P +  +  +  I+  +       SVDL  +S    + T     N       S SPD
Sbjct: 226 PQ--PVW-YDSDKIFITTDEG------SVDLINESGDLIQ-TFQPEDNDEKYCAFSLSPD 275

Query: 313 SSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEAS----YFDPVWSPQGDLIAFTKF 366
             +I+  S   G    Q Y+  ++GS+ K      + +         W P G  +     
Sbjct: 276 RKKILLVSGLPGSFDLQTYISNTDGSELKGKISYYDGTEKRILTKEYWQPNGSCLLV--- 332

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             +   + +++ D +++ LL +  N   P W P G+ ++F   K+     KLYSID++G 
Sbjct: 333 -NQNGNLYLVEGDENKKSLLYK-GNASEPQWFPDGKKILFVEGKN-----KLYSIDVDGT 385

Query: 427 NETLINTPAYASDPQWVGFMD 447
           N T I +    S   W  F D
Sbjct: 386 NLTFITSFGLTSSYFWDLFCD 406



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 84/240 (35%), Gaps = 53/240 (22%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ----ILFEPRFSPNQQKVAYAT 230
            R   +  S + G       + + DG+ ++      D     IL +  + PN   +    
Sbjct: 275 DRKKILLVSGLPGSFDLQTYISNTDGSELKGKISYYDGTEKRILTKEYWQPNGSCLL--- 331

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                   +YL++       K+   ++     P++  +GK+ L     +    +YS+D+ 
Sbjct: 332 --VNQNGNLYLVE---GDENKKSLLYKGNASEPQWFPDGKKILFV---EGKNKLYSIDVD 383

Query: 291 SNATER-----LTNTLFINI--SA-------SYSPDSSQIVFES-----------DREGK 325
                      LT++ F ++           S SP    IVF S           +  G 
Sbjct: 384 GTNLTFITSFGLTSSYFWDLFCDPLDEAKKFSISPSGDLIVFTSALYPDTGKIIENEPGP 443

Query: 326 EQ-------LYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDL-----IAFTKFSGEKFA 372
            +       L+V+ S+ S+  +I+   +  +     WS  G+      I F+  S  ++ 
Sbjct: 444 SKCQNIAAPLFVVNSDSSNLTQITPTIKGRHDILREWSSNGERLTIRSIMFSSDSDWEYK 503


>gi|298246283|ref|ZP_06970089.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
           44963]
 gi|297553764|gb|EFH87629.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
           44963]
          Length = 1219

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 109/334 (32%), Gaps = 47/334 (14%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           RVI    D++    RLW+ +  + +  K         R IA   + D             
Sbjct: 658 RVISGSDDQI---IRLWNTRTTQCL--KTLVGHTNRIRSIAFAPAGD------------- 699

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                     +SG    +L + D +      +    +  ++   +SP+   VA  + D  
Sbjct: 700 --------RAISGSDDMTLMLWDLEKGECLRIFRGHESRIWSVAYSPDGAYVASGSSD-- 749

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA- 293
               V + +       + +      + +  FS +G+    S  +D+ + ++  DLQ+   
Sbjct: 750 --FSVRVWNVENGACVRVLNGHSGRVHSVTFSPDGRYLA-SGSEDQVICLW--DLQTGEC 804

Query: 294 TERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             +L           +S DS Q+   S DR     + +      +     +      +  
Sbjct: 805 LRKLQGHTGRIWPVRFSYDSKQLASGSEDRS----IRIWDVASGECLSTLRGHHNRVWAL 860

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKK 410
            +S    +I           I +   +DG   + L    S +++  +SP G  L+     
Sbjct: 861 AYSFDNRIIVSGSDDQT---IRMWNCEDGQCFKTLQGHSSRVRSVRFSPDGTRLLSGSD- 916

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             D   +L+ +      +TL     +     +  
Sbjct: 917 --DRAVRLWDVASGQSIKTLQGHSTWIYAVAYSP 948



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 108/333 (32%), Gaps = 41/333 (12%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA-------SWRKIAHTISDDIYQSITGE 169
             +          R+WDV   + +   +   +           R I     D   +    E
Sbjct: 825  KQLASGSEDRSIRIWDVASGECLSTLRGHHNRVWALAYSFDNRIIVSGSDDQTIRMWNCE 884

Query: 170  KG-------DFNSRILFVSESVV-----SGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
             G         +SR+  V  S       SG    ++ + D                ++  
Sbjct: 885  DGQCFKTLQGHSSRVRSVRFSPDGTRLLSGSDDRAVRLWDVASGQSIKTLQGHSTWIYAV 944

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +SP+   VA  + D      + L D       + +G   + + A  FS +G + + S  
Sbjct: 945  AYSPHGNIVASGSDDQ----TIRLWDVNTGYCLRTLGGHENWVRAVDFSPDGTQLV-SGS 999

Query: 278  KDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQS-NG 335
             D+ + ++ V+  +    R+         S ++SPD   I       G++ +  +     
Sbjct: 1000 DDQTVRLWQVN--TGLCIRILQHRQSRLWSVAFSPDGHTIA----SGGEDNVVRLWHKET 1053

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQ 393
             +  R     E       +SP G ++A          I + +    +   + +   + + 
Sbjct: 1054 GECLRELHGHERRVRSVTFSPDGLVLASCSDDST---IRIWELATGKCVRIFKGHINWIW 1110

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +  +SP G  L        D   +L+ +  +GR
Sbjct: 1111 SVAFSPDGSCL---TSGGDDNSVRLWDV-ASGR 1139


>gi|189197819|ref|XP_001935247.1| vegetative incompatibility protein HET-E-1 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187981195|gb|EDU47821.1| vegetative incompatibility protein HET-E-1 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 847

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 78/219 (35%), Gaps = 18/219 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R         +    FSP+ Q VA A+ D      V L +         +    S I A
Sbjct: 643 CRSTLEGHSDYVRAVAFSPDGQLVASASNDK----TVRLWEAATGTCRSTLEGHFSYIRA 698

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
             FS +G + + S   D+ + ++  D  +      L        + ++SPD   +   S+
Sbjct: 699 VAFSPDG-QLVASASNDKTVRLW--DAATGTCRSTLEGHSDYVTAVAFSPDGQLVASASN 755

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               + + + ++     +   +   +      +SP G L+A   +      + + +    
Sbjct: 756 ---DKTVQLWEAATGTCRSTLEGHSSYIRAVAFSPDGQLVASASWDST---VRLWEAATG 809

Query: 382 QERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKL 418
             R  +E  +   +A  +SP G+ +      D  TG  +
Sbjct: 810 TCRSTLEGHSDYVRAVAFSPDGQLVA--SASDDKTGGDI 846



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 59/191 (30%), Gaps = 9/191 (4%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V S     ++ + +      R         +    FSP+ Q VA A+ D      V L D
Sbjct: 666 VASASNDKTVRLWEAATGTCRSTLEGHFSYIRAVAFSPDGQLVASASNDK----TVRLWD 721

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                    +      + A  FS +G + + S   D+ + ++           L      
Sbjct: 722 AATGTCRSTLEGHSDYVTAVAFSPDG-QLVASASNDKTVQLWEA-ATGTCRSTLEGHSSY 779

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + ++SPD   +   S       + + ++     +   +          +SP G L+A 
Sbjct: 780 IRAVAFSPDGQLVASAS---WDSTVRLWEAATGTCRSTLEGHSDYVRAVAFSPDGQLVAS 836

Query: 364 TKFSGEKFAIG 374
                    I 
Sbjct: 837 ASDDKTGGDIA 847



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 71/212 (33%), Gaps = 23/212 (10%)

Query: 220 SPNQQKVAYATYDD----------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           SP+ Q       D           E I  + + +   D     +      + A  FS +G
Sbjct: 604 SPDLQYACRYWVDHLKQGGQDQVPEKIKMLSMKEADWDACRSTLEGHSDYVRAVAFSPDG 663

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            + + S   D+ + ++           L        + ++SPD   +   S+    + + 
Sbjct: 664 -QLVASASNDKTVRLWEA-ATGTCRSTLEGHFSYIRAVAFSPDGQLVASASN---DKTVR 718

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +  +     +   +          +SP G L+A          + + +      R  +E 
Sbjct: 719 LWDAATGTCRSTLEGHSDYVTAVAFSPDGQLVASASNDKT---VQLWEAATGTCRSTLEG 775

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             S ++A  +SP G+ +  +     D+  +L+
Sbjct: 776 HSSYIRAVAFSPDGQLVASASW---DSTVRLW 804


>gi|125544252|gb|EAY90391.1| hypothetical protein OsI_11968 [Oryza sativa Indica Group]
          Length = 744

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/294 (16%), Positives = 94/294 (31%), Gaps = 66/294 (22%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-- 274
           P  S +  K+A+   + + +        R+    K   +  S       + +     +  
Sbjct: 403 PTISKDGSKLAFVDNEFKAVWLADSHGLRVVYEKKGPNSVFSTAWNQNTALDTLYVCVGP 462

Query: 275 SVQKDEAMDIYSVD----LQSNATERLTNTLFINISASYSPDSSQIVFESDRE------G 324
           S   D+ + IY++     L      RLT     N   S SPD  ++VF S R+       
Sbjct: 463 SFSADKPLQIYAIHDVSALGGRQQRRLTAGASNNAFPSSSPDGGRLVFRSTRDGGGGGRR 522

Query: 325 KEQLYVM------QSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSG-------- 368
            + LYVM      +       R++     +     WSP+   D I F+            
Sbjct: 523 HKNLYVMEDAAVGEFGTGKVTRLTS-GAWTDTHCSWSPREGSDWIVFSSTRDKPAAAPAD 581

Query: 369 ------EKFAIGVMKKD--GSQERLLVE----DSNLQAPTWSPSGRSLIFSRK------- 409
                   FA+ +++        R++        ++  P +SP GRS+  +         
Sbjct: 582 DNGLDPGYFAVFLVRASDPTVVVRVVRSADSVAGHVNHPVFSPDGRSIAVTADLAAVSAD 641

Query: 410 --------KDGDTGSKLYSIDLN----------GRNETLINTPAYASDPQWVGF 445
                           ++++D++               + ++    S P W  F
Sbjct: 642 PISLPLFLHSVRPYGDIFTVDIDPDDISKNRDVRAFHRVTHSRYENSTPAWTTF 695



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 52/136 (38%), Gaps = 16/136 (11%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ------ 327
           ++ ++     +Y  +L++  T RLT     ++S + SP   ++   S  +GK        
Sbjct: 160 VAARRSPWTVVYGTNLRTGETARLTPRGTFDLSPAVSPSGKRVAVAS-WQGKPGLWDGEI 218

Query: 328 ------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 +YVM  +     R +     +   P W    D+I F +  G  + +        
Sbjct: 219 EDLRTDIYVMNVHKPPLGR-TGPVVKNAGWPTWGSD-DVIFFHRRVGTTWGVFRFSMSTG 276

Query: 382 QE-RLLVEDSNLQAPT 396
           +E R+  E+ +   P 
Sbjct: 277 EEARVTPEEFDAVTPA 292



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 12/154 (7%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-----------DEA 281
                 V            R+    +  L+P  S +GKR  ++  +           D  
Sbjct: 163 RRSPWTVVYGTNLRTGETARLTPRGTFDLSPAVSPSGKRVAVASWQGKPGLWDGEIEDLR 222

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIY +++      R    +      ++  D   I F         ++    +  ++ R+
Sbjct: 223 TDIYVMNVHKPPLGRTGPVVKNAGWPTWGSD-DVIFFHRRVGTTWGVFRFSMSTGEEARV 281

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + ++  +      S     +A  +   +   + V
Sbjct: 282 TPEEFDAVTPAAISETKVAVATIRRKSQFSDVRV 315


>gi|300787956|ref|YP_003768247.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Amycolatopsis
           mediterranei U32]
 gi|299797470|gb|ADJ47845.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Amycolatopsis
           mediterranei U32]
          Length = 648

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 63/212 (29%), Gaps = 34/212 (16%)

Query: 255 NFRSMILAPRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISASY 309
                  AP  S +G+             D +  ++ +        RLT+         +
Sbjct: 53  THGPRDSAPAISPDGRWVAFLRAGEGQGADGSPQLHVMPSDGGEARRLTSLHLGAGEPVW 112

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNG-------SDQKRISQDKEASYFDPVWSPQGDLIA 362
           +PDS +I F +      +     ++G          +RI++                   
Sbjct: 113 APDSRRIAFTARVPEAGRYGTPDADGETPEPAAEAPRRITRMDYRIDDVGF--------- 163

Query: 363 FTKFSGEKFAIGVMKKD-----GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT--- 414
                     + V+  D     G  E L  +  +   P W+P G  ++F+   D      
Sbjct: 164 ---LRDRMQRLFVVDADAALEPGDLEPLTGDGFDAAHPVWTPDGTRVVFTAPPDWGAAES 220

Query: 415 -GSKLYSIDLN-GRNETLINTPAYASDPQWVG 444
               + +I    G  E ++    Y+  P +  
Sbjct: 221 DARDICAISAEGGEPEVVVRCEGYSERPAFGA 252



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 78/239 (32%), Gaps = 28/239 (11%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE---DILRVYL 241
            +    +++  +  DG    +    RD     P  SP+ + VA+    +    D      
Sbjct: 32  RANATHSAVRRVSLDGGEAAWTHGPRDSA---PAISPDGRWVAFLRAGEGQGADGSPQLH 88

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-------NAT 294
           +        +R+ +       P ++ + +R   + +  EA    + D           A 
Sbjct: 89  VMPSDGGEARRLTSLHLGAGEPVWAPDSRRIAFTARVPEAGRYGTPDADGETPEPAAEAP 148

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            R+T   +      +  D  Q +F  D +             D + ++ D       PVW
Sbjct: 149 RRITRMDYRIDDVGFLRDRMQRLFVVDAD-------AALEPGDLEPLTGDGF-DAAHPVW 200

Query: 355 SPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
           +P G  + FT          +   I  +  +G +  ++V  +   + P +   G    F
Sbjct: 201 TPDGTRVVFTAPPDWGAAESDARDICAISAEGGEPEVVVRCEGYSERPAFGADGTLFYF 259



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 5/84 (5%)

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
           + +    A+  +  DG +           AP  SP GR + F R  +G   D   +L+ +
Sbjct: 32  RANATHSAVRRVSLDGGEA-AWTHGPRDSAPAISPDGRWVAFLRAGEGQGADGSPQLHVM 90

Query: 422 DLNGRNETLINT-PAYASDPQWVG 444
             +G     + +    A +P W  
Sbjct: 91  PSDGGEARRLTSLHLGAGEPVWAP 114


>gi|194367705|ref|YP_002030315.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Stenotrophomonas maltophilia R551-3]
 gi|194350509|gb|ACF53632.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Stenotrophomonas maltophilia R551-3]
          Length = 789

 Score = 85.5 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 70/179 (39%), Gaps = 13/179 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSN-----ATERLTNTLFINISAS---YSPDSSQ 315
           R+S +G++A + ++ ++  D + + + +         RLT++ +IN   +   +  D   
Sbjct: 343 RWSPDGQQAAVMLRANDNKDRWIISVNATDGRVQNRHRLTDSGWINWGFNDFGWMADGRT 402

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAI 373
           +   S+  G   LY     G+ + +     +     PV S  G    F   + +   + +
Sbjct: 403 LWLLSEESGFSHLYT--QAGTAKPQALTSGKWETSAPVPSADGKGFYFLCNQQAPHDYEV 460

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +     Q R L   + ++  + SP G+ L+  R        +L  +   G    ++ 
Sbjct: 461 CAVDTGNRQVRELTSLNGVEDFSLSPDGQQLL-VRYSGAYLPPQLAVLPSTGGQARVLT 518



 Score = 65.8 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 71/199 (35%), Gaps = 10/199 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPK-RIGNFRSM 259
            R L    D +    R+SP+ Q+ A      D++D   + +  T      + R+ +   +
Sbjct: 328 ERSLQVMSDFMGGGIRWSPDGQQAAVMLRANDNKDRWIISVNATDGRVQNRHRLTDSGWI 387

Query: 260 ILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                   + ++G+   +  ++     +Y+    +   + LT+  +   +   S D    
Sbjct: 388 NWGFNDFGWMADGRTLWLLSEESGFSHLYT-QAGTAKPQALTSGKWETSAPVPSADGKGF 446

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIG 374
            F  +++      V   +  +++           D   SP G  +   ++SG      + 
Sbjct: 447 YFLCNQQAPHDYEVCAVDTGNRQVRELTSLNGVEDFSLSPDGQQLL-VRYSGAYLPPQLA 505

Query: 375 VMKKDGSQERLLVEDSNLQ 393
           V+   G Q R+L +     
Sbjct: 506 VLPSTGGQARVLTDTRTAD 524



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 69/194 (35%), Gaps = 11/194 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG--ANIRYLTPSR--DQILFEPRFSPNQ 223
           G +   + +   V         +  + V   DG   N   LT S   +    +  +  + 
Sbjct: 341 GIRWSPDGQQAAVMLRANDNKDRWIISVNATDGRVQNRHRLTDSGWINWGFNDFGWMADG 400

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEA 281
           + +   + +       +L        P+ + + +    AP  S++GK      + Q    
Sbjct: 401 RTLWLLSEESGFS---HLYTQAGTAKPQALTSGKWETSAPVPSADGKGFYFLCNQQAPHD 457

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
            ++ +VD  +     LT+   +    S SPD  Q++   S      QL V+ S G   + 
Sbjct: 458 YEVCAVDTGNRQVRELTSLNGVEDF-SLSPDGQQLLVRYSGAYLPPQLAVLPSTGGQARV 516

Query: 341 ISQDKEASYFDPVW 354
           ++  + A Y    W
Sbjct: 517 LTDTRTADYKARQW 530



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 40/144 (27%), Gaps = 7/144 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-----RISQDK--EASYFDPVWSPQGDL 360
            +SPD  Q          +  +++  N +D +     R++        + D  W   G  
Sbjct: 343 RWSPDGQQAAVMLRANDNKDRWIISVNATDGRVQNRHRLTDSGWINWGFNDFGWMADGRT 402

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +           +         + L        AP  S  G+   F   +      ++ +
Sbjct: 403 LWLLSEESGFSHLYTQAGTAKPQALTSGKWETSAPVPSADGKGFYFLCNQQAPHDYEVCA 462

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
           +D   R    + +     D     
Sbjct: 463 VDTGNRQVRELTSLNGVEDFSLSP 486


>gi|240169436|ref|ZP_04748095.1| putative regulatory protein [Mycobacterium kansasii ATCC 12478]
          Length = 962

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 83/309 (26%), Gaps = 39/309 (12%)

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
           +          RLWD    K +                HT    +        G      
Sbjct: 327 RIASGGADNTLRLWDAATGKPVGA----------PLTGHTA--PVLSVAFSPDG------ 368

Query: 178 LFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 +VSG    +L + D   GA I          +    FSP+ +++  A     D 
Sbjct: 369 ----RRIVSGSDDKTLRLWDAATGAPIGAPLTGHTGPVESAGFSPDGRRIVSAGDTIADG 424

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNA 293
                      +    +        +  FS +G+R +        +   +V   D  +  
Sbjct: 425 TVRLWDSGTGQQIGALLTGNSGPWDSVAFSPDGRRIVSGSGPVGNVGPGTVQVWDADTGQ 484

Query: 294 T--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYF 350
              + L        S ++SPD  +IV  S       + +  +               +  
Sbjct: 485 PIGQPLVGGTGPVFSVAFSPDGRRIVSGS---ADSTVRLWDAGTGQPIGAPLTGHTGAVA 541

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFS 407
              +SP G  I           + +      Q     L      + +  +SP G  ++ S
Sbjct: 542 SVAFSPDGRRIVSGSADST---VRLWDAGTGQPIGVPLTGHTGAVASVAFSPDGGRIV-S 597

Query: 408 RKKDGDTGS 416
              DG    
Sbjct: 598 GSPDGRRTP 606



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 77/240 (32%), Gaps = 28/240 (11%)

Query: 182 ESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             +VSG   +++ + D   G  I          +    FSP+ +++   + D      V 
Sbjct: 507 RRIVSGSADSTVRLWDAGTGQPIGAPLTGHTGAVASVAFSPDGRRIVSGSADS----TVR 562

Query: 241 LMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD--------IYSVDLQS 291
           L D    +     +      + +  FS +G R + S   D            +   D+ +
Sbjct: 563 LWDAGTGQPIGVPLTGHTGAVASVAFSPDGGRIV-SGSPDGRRTPPGSVEGTLQLWDVGT 621

Query: 292 NATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEAS 348
                  LT       S ++SPD  +IV  SD    + L +  +              AS
Sbjct: 622 GQQIGAPLTGHTGAVDSVAFSPDGRRIVSGSD---DKTLRLWDAATGQPIGAPLSGSTAS 678

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLI 405
                +SP G  I           + +      Q     L      + +  +SP GR ++
Sbjct: 679 VSSVAFSPDGRRIVSASAD----TVRLWDAGTGQPIGAPLTGHTLWVTSVAFSPDGRRIV 734



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 99/317 (31%), Gaps = 39/317 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIG---------KKFFSSPASWRKIAHTISDD------ 161
            +     +    +LWDV   +QI                SP   R ++   SDD      
Sbjct: 603 RRTPPGSVEGTLQLWDVGTGQQIGAPLTGHTGAVDSVAFSPDGRRIVSG--SDDKTLRLW 660

Query: 162 -------IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQI 213
                  I   ++G     +S         +     +++ + D   G  I          
Sbjct: 661 DAATGQPIGAPLSGSTASVSSVAFSPDGRRIVSASADTVRLWDAGTGQPIGAPLTGHTLW 720

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +    FSP+ +++   + D  D LR++   T        +    + + +  FS +G R +
Sbjct: 721 VTSVAFSPDGRRIVSGSAD--DTLRLWDAGTG-QPIGAPLTGHTASVSSVAFSPDGHRIV 777

Query: 274 ISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            S   D+ + ++  D  +       LT       S ++SPD  +IV  S       L + 
Sbjct: 778 -SGSYDKTLRLW--DAATGQPIGAPLTGHTESVTSVAFSPDGHRIVSGST---DTTLRLW 831

Query: 332 QSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLV-E 388
            +               S     +S  G  I      +     +  +         L   
Sbjct: 832 DAATGAPIGAPLTGHTDSVDSVAFSSDGRRIVSGGSIADGTVRLWDVSTGQQIGPPLSGH 891

Query: 389 DSNLQAPTWSPSGRSLI 405
              + +  +SP GR ++
Sbjct: 892 TGTVFSVAFSPDGRRIV 908



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 65/205 (31%), Gaps = 12/205 (5%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           QQ +A         +   L      ++  +I      + +  FS +G R   S   D  +
Sbjct: 279 QQILAAPAIAPSTDISALLTAVVERQSTIKIIPTPDAVFSVAFSPDGLRIA-SGGADNTL 337

Query: 283 DIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-K 339
            ++  D  +       LT      +S ++SPD  +IV  SD    + L +  +       
Sbjct: 338 RLW--DAATGKPVGAPLTGHTAPVLSVAFSPDGRRIVSGSD---DKTLRLWDAATGAPIG 392

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPT 396
                         +SP G  I     +     + +      Q+    L        +  
Sbjct: 393 APLTGHTGPVESAGFSPDGRRIVSAGDTIADGTVRLWDSGTGQQIGALLTGNSGPWDSVA 452

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
           +SP GR ++      G+ G     +
Sbjct: 453 FSPDGRRIVSGSGPVGNVGPGTVQV 477



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 55/189 (29%), Gaps = 29/189 (15%)

Query: 113 TGRVIKEGKDRLRVE------FRLWDVKDRKQI----IGKKFFSSPASWRKIAHTISDDI 162
              V      R  V        RLWD    + I     G     S  ++    H I    
Sbjct: 721 VTSVAFSPDGRRIVSGSADDTLRLWDAGTGQPIGAPLTGHTASVSSVAFSPDGHRIVSGS 780

Query: 163 YQSITGEKGDFN---------------SRILFVS--ESVVSGIIKNSLCVMDR-DGANIR 204
           Y                          + + F      +VSG    +L + D   GA I 
Sbjct: 781 YDKTLRLWDAATGQPIGAPLTGHTESVTSVAFSPDGHRIVSGSTDTTLRLWDAATGAPIG 840

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    FS + +++       +  +R++ + T     P  +      + +  
Sbjct: 841 APLTGHTDSVDSVAFSSDGRRIVSGGSIADGTVRLWDVSTGQQIGP-PLSGHTGTVFSVA 899

Query: 265 FSSNGKRAL 273
           FS +G+R +
Sbjct: 900 FSPDGRRIV 908



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 38/127 (29%), Gaps = 13/127 (10%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKF 366
           ++SPD  +I           L +  +              A      +SP G  I     
Sbjct: 320 AFSPDGLRIA---SGGADNTLRLWDAATGKPVGAPLTGHTAPVLSVAFSPDGRRIVSGSD 376

Query: 367 SGEKFAIGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 + +            L      +++  +SP GR ++ +     D   +L+    
Sbjct: 377 DKT---LRLWDAATGAPIGAPLTGHTGPVESAGFSPDGRRIVSAGDTIADGTVRLWD--- 430

Query: 424 NGRNETL 430
           +G  + +
Sbjct: 431 SGTGQQI 437


>gi|37523920|ref|NP_927297.1| WD repeat-containing protein [Gloeobacter violaceus PCC 7421]
 gi|35214926|dbj|BAC92292.1| WD-repeat protein [Gloeobacter violaceus PCC 7421]
          Length = 1184

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/352 (14%), Positives = 114/352 (32%), Gaps = 42/352 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA---SWRKIAHTISD------------D 161
                   L    RLW+    + +   +  +      ++    HT++             +
Sbjct: 788  RSLATGSLDRTVRLWETITGQCLKTLQEHTDQVFSIAFHPQGHTLASGSPTQTVKLWDTE 847

Query: 162  IYQSITGEKGDFNSRILFVS----ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
              Q +   +G   + +        +++VSG     + + D        +     + +   
Sbjct: 848  SGQCLRTLQGKTVTVLAVAFSPHGQTLVSGSDDRLVRLWDVRTGECTRVLRGHLRGVTTV 907

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              +P+ + +A A  D    L V + D    +  + +      I +  F+ +G+    S  
Sbjct: 908  AVAPDGRTLASAGAD----LSVKIWDALSGQCLRTLREHTGSIRSVAFAPDGRLLA-SGS 962

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            +D    ++           L        S +++PD   +   S  +G  +++   +   +
Sbjct: 963  QDGTAKLWD-PGTGRCVATLRGHTSWIRSVAFAPDGGLLASGSQ-DGTARIW--DTRTGE 1018

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVE-DSNLQAP 395
              +I            +S  G L+A          I + +       R L E    + + 
Sbjct: 1019 CLQILAGHTYLICSVAFSLDGQLLASGSQDQT---IRLWEVQTGACLRTLTEKTGMVFSL 1075

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSIDLN------GRNETLINTPAYASDPQ 441
             +SP G+ L        D   KL+ +         G + +L+ + AYA D  
Sbjct: 1076 AFSPDGQILA---SGSNDMTVKLWQVGTGRCVKTLGPHTSLVVSIAYAPDGS 1124



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 102/324 (31%), Gaps = 49/324 (15%)

Query: 112 VTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           V   V       L          +LWD    + +   +  + P             I   
Sbjct: 693 VVHSVAFAPDGSLLASAGQDSTVKLWDAATGRCLATLQGHTEP-------------IRSV 739

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +    G            + S     ++ + +                +    F+P+ + 
Sbjct: 740 VFSPDG----------HRLASASHDRTVKLWNPATGRCLATLAGHGDWVSAVAFAPDGRS 789

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A  + D      V L +T   +  K +      + +  F   G     S    + + ++
Sbjct: 790 LATGSLDR----TVRLWETITGQCLKTLQEHTDQVFSIAFHPQGHTLA-SGSPTQTVKLW 844

Query: 286 SVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             D +S    R      + + A ++SP    +V  SD      + +      +  R+ + 
Sbjct: 845 --DTESGQCLRTLQGKTVTVLAVAFSPHGQTLVSGSD---DRLVRLWDVRTGECTRVLRG 899

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVE-DSNLQAPTWSPSGR 402
                     +P G  +A    +G   ++ +     G   R L E   ++++  ++P GR
Sbjct: 900 HLRGVTTVAVAPDGRTLA---SAGADLSVKIWDALSGQCLRTLREHTGSIRSVAFAPDGR 956

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR 426
            L  S  +DG   +KL+     GR
Sbjct: 957 LLA-SGSQDGT--AKLWD-PGTGR 976



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 71/225 (31%), Gaps = 18/225 (8%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V     +  L     DG   +         +    F+PN Q  A A+ D      V L D
Sbjct: 582 VGDDNSEIRLWRA-ADGQ-QQLSCQGHTDWVCAVAFAPNGQTFASASQDG----TVKLWD 635

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLF 302
            RI +    +      + +  F+ +G     S  +D  + ++  D  +      L     
Sbjct: 636 ARIGQCLATLRGHIGWVRSAAFAPDGSLLA-SAGQDSTVKLW--DAATGRCLATLQGHTG 692

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +  S +++PD S +           + +  +         Q         V+SP G  +A
Sbjct: 693 VVHSVAFAPDGSLLA---SAGQDSTVKLWDAATGRCLATLQGHTEPIRSVVFSPDGHRLA 749

Query: 363 FTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLI 405
                     + +      +    L      + A  ++P GRSL 
Sbjct: 750 SASHDRT---VKLWNPATGRCLATLAGHGDWVSAVAFAPDGRSLA 791



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 70/213 (32%), Gaps = 22/213 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ +++A      +D   + L      +           + A  F+ NG+    S  
Sbjct: 572 AFSPDGEQIAV----GDDNSEIRLWRAADGQQQLSCQGHTDWVCAVAFAPNGQTFA-SAS 626

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D  + ++   +       L   +    SA+++PD S +           + +  +    
Sbjct: 627 QDGTVKLWDARI-GQCLATLRGHIGWVRSAAFAPDGSLLA---SAGQDSTVKLWDAATGR 682

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-- 395
                Q          ++P G L+A    +G+   + +        R L        P  
Sbjct: 683 CLATLQGHTGVVHSVAFAPDGSLLA---SAGQDSTVKLWDAATG--RCLATLQGHTEPIR 737

Query: 396 --TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              +SP G  L  +     D   KL++    GR
Sbjct: 738 SVVFSPDGHRLASASH---DRTVKLWN-PATGR 766



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 58/163 (35%), Gaps = 10/163 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    +  + D        +      ++    FS + Q +A  + D      + L + +
Sbjct: 1002 SGSQDGTARIWDTRTGECLQILAGHTYLICSVAFSLDGQLLASGSQDQ----TIRLWEVQ 1057

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 + +     M+ +  FS +G + L S   D  + ++ V       + L     + +
Sbjct: 1058 TGACLRTLTEKTGMVFSLAFSPDG-QILASGSNDMTVKLWQV-GTGRCVKTLGPHTSLVV 1115

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEA 347
            S +Y+PD S +   S     E + +         +R + ++  
Sbjct: 1116 SIAYAPDGSTLASASL---DETIRLFDPATGACLRRFTVERTY 1155



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 60/173 (34%), Gaps = 18/173 (10%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQ 315
             + +  FS +G++  +    D+  +I          ++L+     +   + +++P+   
Sbjct: 566 GGVFSVAFSPDGEQIAV---GDDNSEIRLWRAADGQ-QQLSCQGHTDWVCAVAFAPNGQT 621

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
               S  +G  +L+   +         +          ++P G L+A    +G+   + +
Sbjct: 622 FASASQ-DGTVKLW--DARIGQCLATLRGHIGWVRSAAFAPDGSLLA---SAGQDSTVKL 675

Query: 376 MKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +    L      + +  ++P G  L        D+  KL+     GR
Sbjct: 676 WDAATGRCLATLQGHTGVVHSVAFAPDGSLLA---SAGQDSTVKLWDA-ATGR 724



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 9/121 (7%)

Query: 327 QLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            LY +  + +D  R +        F   +SP G+ IA      +   I + +    Q++L
Sbjct: 545 NLYGVNFSHTDLARCVFAQNFGGVFSVAFSPDGEQIAV---GDDNSEIRLWRAADGQQQL 601

Query: 386 LVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             +       A  ++P+G++   S  +DG    KL+   +     TL     +     + 
Sbjct: 602 SCQGHTDWVCAVAFAPNGQTFA-SASQDGTV--KLWDARIGQCLATLRGHIGWVRSAAFA 658

Query: 444 G 444
            
Sbjct: 659 P 659


>gi|170103266|ref|XP_001882848.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642219|gb|EDR06476.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1515

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 87/230 (37%), Gaps = 18/230 (7%)

Query: 186  SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            SG   N++ V D   G ++       D+ +    FSPN + +   + D    +RV+   T
Sbjct: 816  SGHYDNTVRVWDALSGHSVMDPLKGHDRCINSVAFSPNGRHIVSGSND--KTIRVWDAQT 873

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLF 302
                    +      + +  FS +G+  + S   D+ + ++  D Q+       L     
Sbjct: 874  GQIVM-DPLEGHNDDVTSVAFSPDGRHIV-SGSNDKTIRVW--DSQTGQDVINPLKGHDE 929

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++SPD  QIV  S     + + +     G +     +   ++     +SP G  I
Sbjct: 930  EVTSVAFSPDGRQIVSGSS---DKTIRLWDVQTGQNVIDPLEGHNSNVTSVAFSPDGRHI 986

Query: 362  AFTKFSGEKFAIGVMK-KDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRK 409
                +     ++ V     G    +L+  S  +++  +SP G  +I +  
Sbjct: 987  VSGSYD---MSVRVWNALSGQSIMILLRGSQIIESVAFSPDGNDIICATD 1033



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 96/294 (32%), Gaps = 36/294 (12%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     R+WD      ++               H     I        G        
Sbjct: 815  ASGHYDNTVRVWDALSGHSVMD----------PLKGHDRC--INSVAFSPNG-------- 854

Query: 180  VSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
                +VSG    ++ V D + G  +       +  +    FSP+ + +   + D    +R
Sbjct: 855  --RHIVSGSNDKTIRVWDAQTGQIVMDPLEGHNDDVTSVAFSPDGRHIVSGSND--KTIR 910

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            V+   T  D      G+    + +  FS +G++ + S   D+ + ++ V    N  + L 
Sbjct: 911  VWDSQTGQDVINPLKGHDEE-VTSVAFSPDGRQIV-SGSSDKTIRLWDVQTGQNVIDPLE 968

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   S ++SPD   IV  S       + V  +       I            +SP G
Sbjct: 969  GHNSNVTSVAFSPDGRHIVSGSY---DMSVRVWNALSGQSIMILLRGSQIIESVAFSPDG 1025

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRK 409
            + I     + + F I       SQ  L + + N +  +   +SP G+ ++ +  
Sbjct: 1026 NDII---CATDCFIIRFWDALKSQSMLSILEENCEGISTVAFSPDGKYILSASD 1076



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 47/291 (16%), Positives = 97/291 (33%), Gaps = 41/291 (14%)

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                    R+WD      I+G              H   DD+ QS+      F+    ++
Sbjct: 1115 SGSNDATLRVWDTLTGLSIVG----------PLKGH---DDMVQSV-----AFSPDGSYI 1156

Query: 181  SESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            +    SG    ++ + D   G ++          +     SP+ + +A  +      + V
Sbjct: 1157 A----SGSADCTVRIWDALTGQSLLEPPILHSDQVSSVAVSPDGRHIA--SGSHNRTVTV 1210

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERL 297
            + + T        IG     I +  +S +G+   IS   D+ + I+  D ++       L
Sbjct: 1211 WDVCTGHSMLDPFIG-HNGCISSVAYSPDGRYI-ISGSGDKTIRIW--DARTGQSLMNPL 1266

Query: 298  TNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                +  +S ++SPD   I   S DR     + +                 +     +SP
Sbjct: 1267 IGHEYHVLSVAFSPDGQYIASGSLDRT----VRLWDFQTGQSVMDPLKDRDTVCSVAFSP 1322

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
             G  I    +     ++ +         + +     ++++  +SP GR + 
Sbjct: 1323 DGRYIVSGSY---GHSVRLWDALTGNAVVELGGHYRSVESVVFSPDGRHIA 1370



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 77/201 (38%), Gaps = 18/201 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D I     +SP+ + +A   YD  + +RV+   +         G+ R +  +  FS NG+
Sbjct: 799 DSITEAVAYSPDGRCIASGHYD--NTVRVWDALSGHSVMDPLKGHDRCIN-SVAFSPNGR 855

Query: 271 RALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
             + S   D+ + ++  D Q+       L        S ++SPD   IV  S+    + +
Sbjct: 856 HIV-SGSNDKTIRVW--DAQTGQIVMDPLEGHNDDVTSVAFSPDGRHIVSGSN---DKTI 909

Query: 329 YVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-- 385
            V  S  G D     +  +       +SP G  I           I +      Q  +  
Sbjct: 910 RVWDSQTGQDVINPLKGHDEEVTSVAFSPDGRQIVSGSSDKT---IRLWDVQTGQNVIDP 966

Query: 386 -LVEDSNLQAPTWSPSGRSLI 405
               +SN+ +  +SP GR ++
Sbjct: 967 LEGHNSNVTSVAFSPDGRHIV 987



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 51/303 (16%), Positives = 103/303 (33%), Gaps = 47/303 (15%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      R  V        R+WD +  + ++               H   DD+      
Sbjct: 847  SVAFSPNGRHIVSGSNDKTIRVWDAQTGQIVMD----------PLEGHN--DDVTSVAFS 894

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G            +VSG    ++ V D + G ++       D+ +    FSP+ +++ 
Sbjct: 895  PDG----------RHIVSGSNDKTIRVWDSQTGQDVINPLKGHDEEVTSVAFSPDGRQIV 944

Query: 228  YATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
              + D      + L D +  +     +    S + +  FS +G+  + S   D ++ +++
Sbjct: 945  SGSSDK----TIRLWDVQTGQNVIDPLEGHNSNVTSVAFSPDGRHIV-SGSYDMSVRVWN 999

Query: 287  VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDK 345
              L   +   L     I  S ++SPD + I+  +D      +    +  S     I ++ 
Sbjct: 1000 A-LSGQSIMILLRGSQIIESVAFSPDGNDIICATD---CFIIRFWDALKSQSMLSILEEN 1055

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGR 402
                    +SP G  I     S   F I V     S   +     +     +  +SP+ +
Sbjct: 1056 CEGISTVAFSPDGKYI----LSASDFGIRVWDAATSHTEVDYLRGHYDGIKSVAFSPNCK 1111

Query: 403  SLI 405
             ++
Sbjct: 1112 HIV 1114



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 78/235 (33%), Gaps = 29/235 (12%)

Query: 182  ESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
              +VSG    ++ + D + G N+       +  +    FSP+ + +   +YD      V 
Sbjct: 941  RQIVSGSSDKTIRLWDVQTGQNVIDPLEGHNSNVTSVAFSPDGRHIVSGSYDM----SVR 996

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATE 295
            + +    ++   +     +I +  FS +G   +       ++  +A+   S+        
Sbjct: 997  VWNALSGQSIMILLRGSQIIESVAFSPDGNDIICATDCFIIRFWDALKSQSM------LS 1050

Query: 296  RLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPV 353
             L      I+  A +SPD   I+  SD      + V  +  S  +    +          
Sbjct: 1051 ILEENCEGISTVA-FSPDGKYILSASD----FGIRVWDAATSHTEVDYLRGHYDGIKSVA 1105

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSLI 405
            +SP    I           + V            L   D  +Q+  +SP G  + 
Sbjct: 1106 FSPNCKHIVSGSNDAT---LRVWDTLTGLSIVGPLKGHDDMVQSVAFSPDGSYIA 1157



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 72/212 (33%), Gaps = 29/212 (13%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           PN Q   +   D  + LRV   + R +   + +    S+  A  +S +G+    S   D 
Sbjct: 764 PNSQISMHFMKDFANTLRVQNGE-RSNWPDRCLLRIDSITEAVAYSPDGRCIA-SGHYDN 821

Query: 281 AMDIY-------SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            + ++        +D          +   IN S ++SP+   IV  S+    + + V  +
Sbjct: 822 TVRVWDALSGHSVMDPLKG------HDRCIN-SVAFSPNGRHIVSGSN---DKTIRVWDA 871

Query: 334 NGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +          +SP G  I           I V      Q+ +     + 
Sbjct: 872 QTGQIVMDPLEGHNDDVTSVAFSPDGRHIVSGSNDKT---IRVWDSQTGQDVINPLKGHD 928

Query: 393 Q---APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +   +  +SP GR ++       D   +L+ +
Sbjct: 929 EEVTSVAFSPDGRQIV---SGSSDKTIRLWDV 957



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 61/178 (34%), Gaps = 35/178 (19%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      R  +        R+WD +  + ++             I H      Y  +  
Sbjct: 1232 SVAYSPDGRYIISGSGDKTIRIWDARTGQSLMN----------PLIGHE-----YHVL-- 1274

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                F+    +++    SG +  ++ + D + G ++      RD +     FSP+ + + 
Sbjct: 1275 -SVAFSPDGQYIA----SGSLDRTVRLWDFQTGQSVMDPLKDRDTVCSV-AFSPDGRYIV 1328

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
              +Y       V L D     A   +G     + +  FS +G+    S   D+ + ++
Sbjct: 1329 SGSYGH----SVRLWDALTGNAVVELGGHYRSVESVVFSPDGRHIA-SGSADKTIRLW 1381


>gi|83765018|dbj|BAE55161.1| unnamed protein product [Aspergillus oryzae]
          Length = 1373

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 61/341 (17%), Positives = 114/341 (33%), Gaps = 68/341 (19%)

Query: 102  DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK--QIIGKKFFS------SPASWRK 153
             W+S G          +          R+WDV+      I+  +F        SP   R 
Sbjct: 927  AWSSDG---------SRLASGSTDETIRIWDVRTMDCVFILEGQFSVILCLAWSPDGSRL 977

Query: 154  IAHTISDDI--------YQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANI 203
             + ++ D+I        ++SIT    +    I +  + V  VS     ++ V +      
Sbjct: 978  ASASMDDNIKIWDTTSQFKSITRGHDEILESITWSHDGVQLVSLAEDRTVRVRNTTTGGQ 1037

Query: 204  RYLTPSRDQILFEPR-------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
              +   R  I            +SP+  ++A  + D      V + +           + 
Sbjct: 1038 LSIFQGRPNIRHWHTDYIHKLVWSPDGNQLASGSGDG----TVRVWNPITGDQLSIFRDH 1093

Query: 257  RSMILAPRFSSNGKRALISVQKDEAMDIY------SVDLQSNATERLTNTLFINISASYS 310
             + I    +S +G++   S   D  + ++       + +  +  +R+T         ++S
Sbjct: 1094 INDIRDIAWSPDGRQLA-SASADSTIRVWNPTTGNQLSISGDHIKRITYI-------AWS 1145

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            PD SQ+   +   G  Q++       DQ  IS D      D  WSP G  +A    +G  
Sbjct: 1146 PDGSQLASVAL-NGTAQVW--NPTTGDQLSISGDGIKRATDIAWSPDGSQLASVALNGTA 1202

Query: 371  FAIGV------MKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              +        +   G   + + +        WSP G  L 
Sbjct: 1203 -QVWKPTTSDHLSISGYGIKRITDI------AWSPDGSQLA 1236



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 92/277 (33%), Gaps = 37/277 (13%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             + SG    ++ + D    +  ++   +  ++    +SP+  ++A A+ D  D ++++  
Sbjct: 934  RLASGSTDETIRIWDVRTMDCVFILEGQFSVILCLAWSPDGSRLASASMD--DNIKIWDT 991

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             ++     +       ++ +  +S +G + + S+ +D  + +   +  +     +     
Sbjct: 992  TSQFKSITR---GHDEILESITWSHDGVQLV-SLAEDRTVRVR--NTTTGGQLSIFQGRP 1045

Query: 303  INISAS--------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                          +SPD +Q+   S   G   + V      DQ  I +D      D  W
Sbjct: 1046 NIRHWHTDYIHKLVWSPDGNQLASGS---GDGTVRVWNPITGDQLSIFRDHINDIRDIAW 1102

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKD- 411
            SP G  +A          I V       +  +  D    +    WSP G  L        
Sbjct: 1103 SPDGRQLASASADST---IRVWNPTTGNQLSISGDHIKRITYIAWSPDGSQLASVALNGT 1159

Query: 412  ----GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                  T     SI  +G           A+D  W  
Sbjct: 1160 AQVWNPTTGDQLSISGDGIKR--------ATDIAWSP 1188



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 52/312 (16%), Positives = 105/312 (33%), Gaps = 61/312 (19%)

Query: 84   QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK 143
               FK      D I     W+  G Q++         +DR     R+ +     Q+    
Sbjct: 992  TSQFKSITRGHDEILESITWSHDGVQLV------SLAEDR---TVRVRNTTTGGQL---S 1039

Query: 144  FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
             F    + R   H  +D I++ +    G            + SG    ++ V +    + 
Sbjct: 1040 IFQGRPNIR---HWHTDYIHKLVWSPDG----------NQLASGSGDGTVRVWNPITGDQ 1086

Query: 204  RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
              +       + +  +SP+ +++A A+ D      + + +          G+    I   
Sbjct: 1087 LSIFRDHINDIRDIAWSPDGRQLASASADS----TIRVWNPTTGNQLSISGDHIKRITYI 1142

Query: 264  RFSSNGKRALISVQKDEAMDIY------SVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             +S +G +   SV  +    ++       + +  +  +R T+        ++SPD SQ+ 
Sbjct: 1143 AWSPDGSQLA-SVALNGTAQVWNPTTGDQLSISGDGIKRATDI-------AWSPDGSQLA 1194

Query: 318  FESDREGKEQLYV------MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              +   G  Q++       +  +G   KRI+        D  WSP G  +A    +G   
Sbjct: 1195 SVAL-NGTAQVWKPTTSDHLSISGYGIKRIT--------DIAWSPDGSQLASVALNGT-- 1243

Query: 372  AIGVMKKDGSQE 383
             + V        
Sbjct: 1244 -VWVWNLTTENP 1254



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 61/203 (30%), Gaps = 22/203 (10%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    ++    +S +  ++A   Y    I      D       +        I    
Sbjct: 837  QTLEGHTDVICSLAWSRDGSRLASGAYSSARI-----WDLDTSECSRLYS-----ICCLA 886

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +S +G R            +   D Q+              S ++S D S++   S    
Sbjct: 887  WSPDGSRLA---AGSLYPIVNVWDTQTRDCVLRKGHASRITSVAWSSDGSRLASGST--- 940

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             E + +      D   I + + +      WSP G  +A          I +     SQ +
Sbjct: 941  DETIRIWDVRTMDCVFILEGQFSVILCLAWSPDGSRLASASMDD---NIKIWDT-TSQFK 996

Query: 385  LLVEDSN--LQAPTWSPSGRSLI 405
             +    +  L++ TWS  G  L+
Sbjct: 997  SITRGHDEILESITWSHDGVQLV 1019


>gi|37521534|ref|NP_924911.1| WD repeat-containing protein [Gloeobacter violaceus PCC 7421]
 gi|35212532|dbj|BAC89906.1| WD-repeat protein [Gloeobacter violaceus PCC 7421]
          Length = 1197

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 51/293 (17%), Positives = 96/293 (32%), Gaps = 37/293 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GRV+  G     V  RLWD +  + +  K F       R +A               G  
Sbjct: 621 GRVLASGSADRTV--RLWDYRTGQCL--KVFQGHEGWVRSVA-----------FHPGGGI 665

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                       SG    ++ + + D              +   RFSPN Q +A ++ D 
Sbjct: 666 L----------ASGSEDAAVRLWEVDSGRCLLTLRGHSGWIHAVRFSPNGQWLASSSQDG 715

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +    + L         + +      + +  F+ +G+   IS   D+ + ++ V  +   
Sbjct: 716 K----IQLWHPESGEPLQAMQGHTGWVRSIAFAPDGQTL-ISGSDDQTLRLWDVQ-RGLL 769

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            + L        S  +S D   +   SD    + + +  ++     R+           V
Sbjct: 770 LKCLQGHTGWVRSVDFSADGRTLASGSD---DQTVRLWDADSGLCFRVMHGHSNWISSVV 826

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
           +SP G L+           I  +   G   R+L    S + +  +   G++L 
Sbjct: 827 FSPDGRLLTSGSVDHSV-RIWEIS-SGHCLRVLQGHGSGIWSVAFRGDGKTLA 877



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 112/349 (32%), Gaps = 38/349 (10%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS-------PASWRKIAHTISDDIYQ-- 164
            G+ +  G D   +  RLWDV+    +   +  +         A  R +A    D   +  
Sbjct: 747  GQTLISGSDDQTL--RLWDVQRGLLLKCLQGHTGWVRSVDFSADGRTLASGSDDQTVRLW 804

Query: 165  --------SITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                     +     ++ S ++F  +     SG + +S+ + +    +   +       +
Sbjct: 805  DADSGLCFRVMHGHSNWISSVVFSPDGRLLTSGSVDHSVRIWEISSGHCLRVLQGHGSGI 864

Query: 215  FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            +   F  + + +A  + D      V L D    +  + +    S +    FS +G     
Sbjct: 865  WSVAFRGDGKTLASGSIDH----SVRLWDFSTRQPMRSLQAHTSWVRTVAFSPDGTLLA- 919

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            S  +D  + ++  D      + L        S ++SP+ + +   S       L +    
Sbjct: 920  SSGQDRTIKLWDPD-SGRCLKTLRGHTGWVNSLAFSPNGALLASSSV---DHSLRIWNVE 975

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                  + Q   +      + P G ++A          +  ++       L    S +++
Sbjct: 976  TGQCLGMLQGHTSWVRSVAFHPDGRVLASASQDKTA-RLWDIETGRCLWTLQGHTSWVRS 1034

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              + P G +L        D   KL+ +        L ++ +      W 
Sbjct: 1035 VAFHPDGHTLASGSD---DGTVKLWDVQTG----RLADSLSGHGSGVWS 1076



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/288 (15%), Positives = 93/288 (32%), Gaps = 23/288 (7%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK--------NSLC 194
                 A  R     + +  +Q     +  F   +  VS    S   +         ++ 
Sbjct: 535 TLTVRQADLRGA--RLCNANFQQTNFSQSIFTEALSTVSSVAFSPDGQLLATSEINGTIR 592

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +     A            ++   FSP+ + +A  + D      V L D R  +  K   
Sbjct: 593 LWQAADAQQLAYCRGHTSWVWSIAFSPDGRVLASGSADR----TVRLWDYRTGQCLKVFQ 648

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                + +  F   G   L S  +D A+ ++ VD        L        +  +SP+  
Sbjct: 649 GHEGWVRSVAFHPGGG-ILASGSEDAAVRLWEVD-SGRCLLTLRGHSGWIHAVRFSPNGQ 706

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S ++GK QL+       +  +  Q          ++P G  +  +    +   + 
Sbjct: 707 WLA-SSSQDGKIQLW--HPESGEPLQAMQGHTGWVRSIAFAPDGQTLI-SGSDDQTLRLW 762

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +++    + L      +++  +S  GR+L        D   +L+  D
Sbjct: 763 DVQRGLLLKCLQGHTGWVRSVDFSADGRTLASGSD---DQTVRLWDAD 807



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 79/255 (30%), Gaps = 15/255 (5%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
               G ++       +++ SG I +S+ + D           +    +    FSP+   +A
Sbjct: 860  HGSGIWSVAFRGDGKTLASGSIDHSVRLWDFSTRQPMRSLQAHTSWVRTVAFSPDGTLLA 919

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                       + L D    R  K +      + +  FS NG     S   D ++ I+  
Sbjct: 920  ----SSGQDRTIKLWDPDSGRCLKTLRGHTGWVNSLAFSPNGALLA-SSSVDHSLRIW-- 972

Query: 288  DLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            ++++      L        S ++ PD   +   S     +   +            Q   
Sbjct: 973  NVETGQCLGMLQGHTSWVRSVAFHPDGRVLASASQ---DKTARLWDIETGRCLWTLQGHT 1029

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +      + P G  +A +        +  ++     + L    S + +  ++  G+ L  
Sbjct: 1030 SWVRSVAFHPDGHTLA-SGSDDGTVKLWDVQTGRLADSLSGHGSGVWSVVFAADGKRLA- 1087

Query: 407  SRKKDGDTGSKLYSI 421
                  D   +L+  
Sbjct: 1088 --SGGDDKTVRLWDT 1100



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 75/250 (30%), Gaps = 34/250 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G         +    RLWD   R+ +   +           AHT    +        G  
Sbjct: 871  GDGKTLASGSIDHSVRLWDFSTRQPMRSLQ-----------AHT--SWVRTVAFSPDGTL 917

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                        S     ++ + D D              +    FSPN   +A ++ D 
Sbjct: 918  L----------ASSGQDRTIKLWDPDSGRCLKTLRGHTGWVNSLAFSPNGALLASSSVDH 967

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + + +    +    +    S + +  F  +G+    S  +D+   ++  D+++  
Sbjct: 968  ----SLRIWNVETGQCLGMLQGHTSWVRSVAFHPDGRVLA-SASQDKTARLW--DIETGR 1020

Query: 294  -TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                L        S ++ PD   +   SD +G  +L+                 +  +  
Sbjct: 1021 CLWTLQGHTSWVRSVAFHPDGHTLASGSD-DGTVKLW--DVQTGRLADSLSGHGSGVWSV 1077

Query: 353  VWSPQGDLIA 362
            V++  G  +A
Sbjct: 1078 VFAADGKRLA 1087



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 57/157 (36%), Gaps = 21/157 (13%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWS 355
           T  L    S ++SPD   +   S+  G  +L+      +D ++++  +  +   +   +S
Sbjct: 564 TEALSTVSSVAFSPDGQLLA-TSEINGTIRLWQA----ADAQQLAYCRGHTSWVWSIAFS 618

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGD 413
           P G ++A          + +      Q   + +     +++  + P G  L        D
Sbjct: 619 PDGRVLASGSADRT---VRLWDYRTGQCLKVFQGHEGWVRSVAFHPGGGILA---SGSED 672

Query: 414 TGSKLYSIDLNGRNETLINTPAY------ASDPQWVG 444
              +L+ +D      TL     +      + + QW+ 
Sbjct: 673 AAVRLWEVDSGRCLLTLRGHSGWIHAVRFSPNGQWLA 709


>gi|332706346|ref|ZP_08426409.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332354895|gb|EGJ34372.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1625

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 58/336 (17%), Positives = 127/336 (37%), Gaps = 44/336 (13%)

Query: 109  QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI---IGKKFFSSPASWRKIAHTI----SD- 160
            Q+L TG         ++    LW++   K+I   +G        S+ +   T+    +D 
Sbjct: 1030 QLLATGS----ADGTVK----LWNLNTGKEIGTLLGHTGTVKSLSFSRYGKTLTTGSADG 1081

Query: 161  -----------DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
                       +I   +  +    +   +   E +VS    +++ + DR G  I     +
Sbjct: 1082 TVKLWNLETGQEIRTLLGQKADITSLSFILDGELIVSASRDSTVSLWDRQGNPIGQPFQA 1141

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            ++  +     SP+ Q +  A  D      V L + +  +  + + +  + I +  FS +G
Sbjct: 1142 QEAGVTSISISPDGQTLVTANMDG----AVILWNLQ-GQEKRTLQSSGATISSVSFSPDG 1196

Query: 270  KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +    +   D  + ++S   +    + L        + S+SPD + +   + R+   +L+
Sbjct: 1197 QTIA-TGSFDGTVKLWS--REGQELQILPGHNRGITTISFSPDGNILA-TASRDLTVRLW 1252

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VE 388
             ++ +   + +     +A      +SP G  IA   F G    + V ++DG+    L   
Sbjct: 1253 SVE-DYDLKTQTLFGHKAVVDSVSFSPDGRTIATASFDGT---VKVWERDGTLVSTLEGH 1308

Query: 389  DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               + + ++SP    +        D   KL+ +D  
Sbjct: 1309 QGAVISLSFSPDDNVIA---SLGLDGSVKLWKLDGT 1341



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 93/229 (40%), Gaps = 19/229 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++ +     ++ V +RDG  +          +    FSP+   +A  +   +  ++++ 
Sbjct: 1281 RTIATASFDGTVKVWERDGT-LVSTLEGHQGAVISLSFSPDDNVIA--SLGLDGSVKLWK 1337

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +D       K +   ++ I++  FS +GK    S   D  + ++S  L+    + +    
Sbjct: 1338 LD---GTLVKTLEENQNPIISFSFSPDGKFLA-SAGLDGTVKLWS--LEGKLIKTIDAHK 1391

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDL 360
                S S+SPD+      S+ +G  +L+    N   Q+  +       FD V +SP G +
Sbjct: 1392 ASVYSVSFSPDAQLFASASN-DGTVKLW----NLIGQQLATLKGHNDDFDSVKFSPNGKI 1446

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
            IA     G    + +    G +   L    + + + ++S  G++L  + 
Sbjct: 1447 IATASKDGT---LKLWNLSGEELETLKGHSAAVISLSFSRDGQTLATAS 1492



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 100/255 (39%), Gaps = 29/255 (11%)

Query: 173  FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            F+    F++ + + G +K    +   +G  I+ +   +  +     FSP+ Q  A A+ D
Sbjct: 1358 FSPDGKFLASAGLDGTVK----LWSLEGKLIKTIDAHKASVYSV-SFSPDAQLFASASND 1412

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSNGKRALISVQKDEAMDIYSVDL 289
                  V L +       +++   +       + +FS NGK    +  KD  + ++  +L
Sbjct: 1413 G----TVKLWNL----IGQQLATLKGHNDDFDSVKFSPNGKIIA-TASKDGTLKLW--NL 1461

Query: 290  QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                 E L       IS S+S D   +   +  +G   + +    G     + +      
Sbjct: 1462 SGEELETLKGHSAAVISLSFSRDGQTLA-TASLDGT--IKLWNLQGQQLATL-KGHSGVV 1517

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSR 408
                + P G ++A +  S     +  +  +G   + L    + + + ++SP G++L  + 
Sbjct: 1518 NSLSFIPYGTILA-SGSSDGTVKLWSL-PEGKVLQTLKSSGAAINSVSFSPDGKTLATAS 1575

Query: 409  KKDGDTGSKLYSIDL 423
            +   D    L++IDL
Sbjct: 1576 E---DKTVMLWNIDL 1587



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 87/256 (33%), Gaps = 57/256 (22%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                +  +    FSP+ Q +A  + D  D ++++  D    +  + +    S + +  FS
Sbjct: 972  LEGYESWVNSVSFSPDGQFIATGSAD--DTVKLWHRD---GKLLRTLVGHSSYVNSVSFS 1026

Query: 267  SNGKRALISVQKDEAMDIYSVDLQ------------------SNATERLTNTLFIN---- 304
             +G+    +   D  + +++++                    S   + LT          
Sbjct: 1027 PDGQLLA-TGSADGTVKLWNLNTGKEIGTLLGHTGTVKSLSFSRYGKTLTTGSADGTVKL 1085

Query: 305  -------------------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                                S S+  D   IV  S R+    L+     G+   +  Q +
Sbjct: 1086 WNLETGQEIRTLLGQKADITSLSFILDGELIVSAS-RDSTVSLW--DRQGNPIGQPFQAQ 1142

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSL 404
            EA       SP G  +      G   A+ +    G ++R L    + + + ++SP G+++
Sbjct: 1143 EAGVTSISISPDGQTLVTANMDG---AVILWNLQGQEKRTLQSSGATISSVSFSPDGQTI 1199

Query: 405  IFSRKKDGDTGSKLYS 420
                    D   KL+S
Sbjct: 1200 A---TGSFDGTVKLWS 1212



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 63/188 (33%), Gaps = 14/188 (7%)

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              L          R   R+  + S + +  FS +G+    +   D+ + ++         
Sbjct: 954  QTLAALQQGIYAVRESNRLEGYESWVNSVSFSPDGQFIA-TGSADDTVKLW--HRDGKLL 1010

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
              L        S S+SPD   +      +G  +L+    N   +         +     +
Sbjct: 1011 RTLVGHSSYVNSVSFSPDGQLLA-TGSADGTVKLW--NLNTGKEIGTLLGHTGTVKSLSF 1067

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            S  G  +      G    + +   +  QE   LL + +++ + ++   G  ++ + +   
Sbjct: 1068 SRYGKTLTTGSADGT---VKLWNLETGQEIRTLLGQKADITSLSFILDGELIVSASR--- 1121

Query: 413  DTGSKLYS 420
            D+   L+ 
Sbjct: 1122 DSTVSLWD 1129



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 45/109 (41%), Gaps = 6/109 (5%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ +  +  ++ + +  G  +  L      ++    F P    +A  + D      V L
Sbjct: 1486 QTLATASLDGTIKLWNLQGQQLATL-KGHSGVVNSLSFIPYGTILASGSSDG----TVKL 1540

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                  +  + + +  + I +  FS +GK    +  +D+ + ++++DL 
Sbjct: 1541 WSLPEGKVLQTLKSSGAAINSVSFSPDGKTLA-TASEDKTVMLWNIDLA 1588


>gi|75909063|ref|YP_323359.1| WD-40 repeat-containing serine/threonine protein kinase [Anabaena
           variabilis ATCC 29413]
 gi|75702788|gb|ABA22464.1| serine/threonine protein kinase with WD40 repeats [Anabaena
           variabilis ATCC 29413]
          Length = 677

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 81/243 (33%), Gaps = 19/243 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                  + +    FSP+ + +   + D+     + + + +  +  + I      +    
Sbjct: 430 STLNGHSRKVNAVVFSPDGKTLVSGSDDN----TIKIWNLKTGQVIRTITGHSDAVHTLA 485

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S NGK  + S   D  + +++++        LT   F   S + SPD   I   S    
Sbjct: 486 ISPNGKTLV-SGSDDNTVKVWNLN-TGRLINTLTGHTFWVRSVAISPDGVNIASGSF--- 540

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +      +          +     +SP G+ +A          I  +        
Sbjct: 541 DKTVKIWNLETGNLTHTLAGNGETVTSIAFSPDGNTLASASRD-RTIKIWKVGAGTRVRT 599

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYAS 438
           L      + +  +SP G +L  + +   D   KL++++      TL      + T A+  
Sbjct: 600 LKGSTETITSIAFSPDGNTLASASR---DQTIKLWNLETGEEIRTLEGHENTVTTVAFTP 656

Query: 439 DPQ 441
           D  
Sbjct: 657 DGA 659



 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 74/226 (32%), Gaps = 15/226 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             PS +        SPN Q +A    D      + +           +      + A  F
Sbjct: 389 TLPSDENAFVSLAISPNGQIIASCGSDR----SIKIWQLATGEDISTLNGHSRKVNAVVF 444

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREG 324
           S +GK  + S   D  + I+  +L++    R +T       + + SP+   +V  SD   
Sbjct: 445 SPDGKTLV-SGSDDNTIKIW--NLKTGQVIRTITGHSDAVHTLAISPNGKTLVSGSD--- 498

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + V   N                    SP G  IA   F  +   I  ++       
Sbjct: 499 DNTVKVWNLNTGRLINTLTGHTFWVRSVAISPDGVNIASGSFD-KTVKIWNLETGNLTHT 557

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           L      + +  +SP G +L  + +   D   K++ +    R  TL
Sbjct: 558 LAGNGETVTSIAFSPDGNTLASASR---DRTIKIWKVGAGTRVRTL 600



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 66/163 (40%), Gaps = 12/163 (7%)

Query: 173 FNSRILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           F  R + +S   V   SG    ++ + + +  N+ +      + +    FSP+   +A A
Sbjct: 521 FWVRSVAISPDGVNIASGSFDKTVKIWNLETGNLTHTLAGNGETVTSIAFSPDGNTLASA 580

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D      + +         + +      I +  FS +G     S  +D+ + ++  +L
Sbjct: 581 SRDR----TIKIWKVGAGTRVRTLKGSTETITSIAFSPDGNTLA-SASRDQTIKLW--NL 633

Query: 290 QSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           ++    R L        + +++PD + +V  S+ +   +++ +
Sbjct: 634 ETGEEIRTLEGHENTVTTVAFTPDGANLVSGSE-DNTMRIWRI 675


>gi|152965662|ref|YP_001361446.1| hypothetical protein Krad_1696 [Kineococcus radiotolerans SRS30216]
 gi|151360179|gb|ABS03182.1| WD40 domain protein beta Propeller [Kineococcus radiotolerans
           SRS30216]
          Length = 285

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 76/218 (34%), Gaps = 26/218 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++PN  + A       D     ++      A + +    S      F+ + +   IS  
Sbjct: 66  AWAPNGVQAAIL-----DPNGALIVINTRTCAKRTVATGVSRFHGLAFTPDSRSIAISRN 120

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            D    ++ +   + A   +LT+T  I     S+SPD   + +   REG   +++     
Sbjct: 121 GD----LFLISAGTGATVRKLTSTRLIVESDPSFSPDGKSVAYR--REGA--IWIQTIAT 172

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-------EKFAIGVMKKDGSQERLLVE 388
               R          +P +SP G  IA+  + G           I      G   +  + 
Sbjct: 173 GQSIR----WRVGAINPQYSPDGTKIAYQVYEGDEPAYNRGDGRIWYAPVTGGTPKDTLI 228

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           D+N     WSP G +  FS    G+    ++     GR
Sbjct: 229 DANADDFVWSPDGTAFAFSAASTGENAYTIFLARTTGR 266



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 61/166 (36%), Gaps = 22/166 (13%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           GA +R LT +R  +  +P FSP+ + VAY          +++      ++ +    +R  
Sbjct: 131 GATVRKLTSTRLIVESDPSFSPDGKSVAY-----RREGAIWIQTIATGQSIR----WRVG 181

Query: 260 ILAPRFSSNGKRALISVQKD-------EAMDIYSVDLQSNATE-RLTNTLFINISASYSP 311
            + P++S +G +    V +            I+   +     +  L +    +    +SP
Sbjct: 182 AINPQYSPDGTKIAYQVYEGDEPAYNRGDGRIWYAPVTGGTPKDTLIDANADDF--VWSP 239

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSP 356
           D +   F +   G+    +  +  +   RI Q           W P
Sbjct: 240 DGTAFAFSAASTGENAYTIFLARTTG--RIYQSVGGTPSSGVSWQP 283


>gi|254426115|ref|ZP_05039832.1| hypothetical protein S7335_683 [Synechococcus sp. PCC 7335]
 gi|196188538|gb|EDX83503.1| hypothetical protein S7335_683 [Synechococcus sp. PCC 7335]
          Length = 1236

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/331 (15%), Positives = 107/331 (32%), Gaps = 40/331 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQI------------------IGKKFFSSPASWRKIAHTI 158
            +          RLWD K  K +                    +    S     ++ H  
Sbjct: 662 TQLASGSADRTVRLWDAKTGKCLKVLEGHQNWVMSVAFSPDGTQLASGSADRTVRLWHVA 721

Query: 159 SDDIYQSI-TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           S    + +     G ++      ++ + SG    ++ + D                ++  
Sbjct: 722 SGKCQRVLEGHGHGVWSVAFAATADYLASGSADRTVRLWDVRTGECLKTLIDHQHGVWSV 781

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F P+  ++A  + D      V L D    +    +    + I    FS +G +   +  
Sbjct: 782 AFHPDGSQLASGSADQ----TVRLWDVPSGKCLDTLLGHSNWIWTVAFSPDGSQLA-TGS 836

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNG 335
            D+ + ++  ++ +      L        S ++SP+   +   S DR     + +     
Sbjct: 837 ADQTVRLW--NVATRQCLRVLAGHSNWVWSIAFSPNGHYLTSGSEDRT----MRLWNLMS 890

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD----GSQERLLVEDSN 391
               +  Q      +   +SP G  +A +        +  M+ D     S + L      
Sbjct: 891 GQCLKSLQGSGNWVWALAFSPDGKTLA-SGQGDRSLVLRDMQADLSLESSSKTLFGAQKA 949

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           + +  +SP+GR L  S  +DG  G  L+ +D
Sbjct: 950 IWSVVFSPNGRQLA-SGNEDG--GVHLWQLD 977



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 100/294 (34%), Gaps = 26/294 (8%)

Query: 130 LWDV-KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           L DV      +    F     S R +A   +D++  +     GD N  I      + +G 
Sbjct: 577 LHDVVFSGSDLSNSLFNQPFGSIRAMAFR-ADNVLAT-----GDTNGEIWLWQSQLSAGT 630

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                 +   D  +           +    FSP+  ++A  + D      V L D +  +
Sbjct: 631 S----AMTAGDIGSHISTFKGHQNWVCSVAFSPDGTQLASGSADR----TVRLWDAKTGK 682

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K +   ++ +++  FS +G +   S   D  + ++ V         L        S +
Sbjct: 683 CLKVLEGHQNWVMSVAFSPDGTQLA-SGSADRTVRLWHV-ASGKCQRVLEGHGHGVWSVA 740

Query: 309 YSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++  +  +   S DR     + +      +  +   D +   +   + P G  +A +  +
Sbjct: 741 FAATADYLASGSADRT----VRLWDVRTGECLKTLIDHQHGVWSVAFHPDGSQLA-SGSA 795

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +   +  +      + LL   + +    +SP G  L        D   +L+++
Sbjct: 796 DQTVRLWDVPSGKCLDTLLGHSNWIWTVAFSPDGSQLA---TGSADQTVRLWNV 846



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 103/317 (32%), Gaps = 35/317 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDRK---QIIGKK----FFSSPASWRKIAHTISDDIYQ----- 164
             +          RLWDV   K    ++G        +      ++A   +D   +     
Sbjct: 788  SQLASGSADQTVRLWDVPSGKCLDTLLGHSNWIWTVAFSPDGSQLATGSADQTVRLWNVA 847

Query: 165  -----SITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                  +     ++   I F      + SG    ++ + +                ++  
Sbjct: 848  TRQCLRVLAGHSNWVWSIAFSPNGHYLTSGSEDRTMRLWNLMSGQCLKSLQGSGNWVWAL 907

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ + +A    D   +LR    D  ++ + K +   +  I +  FS NG++   S  
Sbjct: 908  AFSPDGKTLASGQGDRSLVLRDMQADLSLESSSKTLFGAQKAIWSVVFSPNGRQLA-SGN 966

Query: 278  KDEAMDIYSVDLQ-------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            +D  + ++ +D Q         +  R +       S ++SP   ++   S     + + +
Sbjct: 967  EDGGVHLWQLDKQLWRSPSKGESHYRFSGHEKSVWSVAFSPTGDRLASGS---ADQSIKL 1023

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VE 388
               +    ++     +       + P+ +L+A   +      I +               
Sbjct: 1024 WDLDTRKCQQTLTGHQHWVSSVAFHPEENLLASGSYDRT---IKLWDLATHNCVATWRGH 1080

Query: 389  DSNLQAPTWSPSGRSLI 405
             S L    +SP+G  L+
Sbjct: 1081 TSGLWCIAFSPTGDFLV 1097



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 81/240 (33%), Gaps = 26/240 (10%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +   L      G +  Y     ++ ++   FSP   ++A  + D      + L D    
Sbjct: 975  QLDKQLWRSPSKGES-HYRFSGHEKSVWSVAFSPTGDRLASGSADQ----SIKLWDLDTR 1029

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA----TERLTNTLFI 303
            +  + +   +  + +  F    +  L S   D  + ++  DL ++         T+ L+ 
Sbjct: 1030 KCQQTLTGHQHWVSSVAFHPE-ENLLASGSYDRTIKLW--DLATHNCVATWRGHTSGLWC 1086

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                ++SP    +V  S       + +  ++    K+I +  +        SP G  IA 
Sbjct: 1087 I---AFSPTGDFLVSGSL---DCTVRLWDTHTGTCKQIFEGHKNWVISVAVSPDGQCIAS 1140

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
                     + +      Q    ++       +  +SP G+ L        D   +L+S+
Sbjct: 1141 ASADRT---VRLWNTHSGQLVHALQGHTNSVWSVDFSPDGKMLASGSD---DKTIRLWSV 1194



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 71/222 (31%), Gaps = 16/222 (7%)

Query: 163  YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            Y+    EK  ++       + + SG    S+ + D D    +         +    F P 
Sbjct: 991  YRFSGHEKSVWSVAFSPTGDRLASGSADQSIKLWDLDTRKCQQTLTGHQHWVSSVAFHPE 1050

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +  +A  +YD      + L D              S +    FS  G   + S   D  +
Sbjct: 1051 ENLLASGSYDR----TIKLWDLATHNCVATWRGHTSGLWCIAFSPTGDFLV-SGSLDCTV 1105

Query: 283  DIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKR 340
             ++  D  +   +++        IS + SPD   I   S DR     + +  ++      
Sbjct: 1106 RLW--DTHTGTCKQIFEGHKNWVISVAVSPDGQCIASASADRT----VRLWNTHSGQLVH 1159

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              Q    S +   +SP G ++A          I +   +   
Sbjct: 1160 ALQGHTNSVWSVDFSPDGKMLASGSDDKT---IRLWSVETGD 1198



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 59/168 (35%), Gaps = 28/168 (16%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     +LWD+     +         A+WR   HT    ++       GDF      
Sbjct: 1055 ASGSYDRTIKLWDLATHNCV---------ATWR--GHT--SGLWCIAFSPTGDFL----- 1096

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                 VSG +  ++ + D      + +       +     SP+ Q +A A+ D      V
Sbjct: 1097 -----VSGSLDCTVRLWDTHTGTCKQIFEGHKNWVISVAVSPDGQCIASASADR----TV 1147

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             L +T   +    +    + + +  FS +GK    S   D+ + ++SV
Sbjct: 1148 RLWNTHSGQLVHALQGHTNSVWSVDFSPDGKMLA-SGSDDKTIRLWSV 1194


>gi|186686879|ref|YP_001870072.1| WD-40 repeat-containing protein [Nostoc punctiforme PCC 73102]
 gi|186469231|gb|ACC85031.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1006

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 91/270 (33%), Gaps = 23/270 (8%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDR--DGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             F  ++L  + +  +     +L V     D           +  +    FSP+ + +  
Sbjct: 31  IFFAPQVLAQTPNQPNPHKNPALAVTGSFIDYFAEERQLKGHEGSVNSASFSPDDKLI-- 88

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            T   ++  RV+       +    +   +S + +  FS +GK  +++   D    I+  D
Sbjct: 89  VTAGADNTARVWDF---SGKQLVELIGHQSNVYSANFSPDGK-LIVTASFDGTARIW--D 142

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +       L        SA++S D   I+  S     +   +   +G    +I+   E  
Sbjct: 143 ISGKQLVELKGHQGNVYSANFSSDGKWIITAS---ADKTARIWDISGQQIAQIT-GHENI 198

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFS 407
                +S  G  I             +    G     L      + +  +SP G+ ++ +
Sbjct: 199 VTSANFSSDGKRIITASADKTA---CMWDLSGKLLVQLKGHTDTVWSANFSPDGQRIVTA 255

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                D  ++++  DL+G+    +     +
Sbjct: 256 SD---DKTARVW--DLSGKVLAELKGHGDS 280



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 51/284 (17%), Positives = 100/284 (35%), Gaps = 41/284 (14%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           R+WD    KQ++             I H    ++Y +     G          + +V+  
Sbjct: 98  RVWD-FSGKQLVEL-----------IGHQ--SNVYSANFSPDG----------KLIVTAS 133

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              +  + D  G  +          ++   FS + + +  A+ D     R++ +     +
Sbjct: 134 FDGTARIWDISGKQL-VELKGHQGNVYSANFSSDGKWIITASAD--KTARIWDI---SGQ 187

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              +I    +++ +  FSS+GKR  I+   D+   ++  DL      +L        SA+
Sbjct: 188 QIAQITGHENIVTSANFSSDGKRI-ITASADKTACMW--DLSGKLLVQLKGHTDTVWSAN 244

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD  +IV  SD    +   V   +G     +    + S +   +SP G LI       
Sbjct: 245 FSPDGQRIVTASD---DKTARVWDLSGKVLAELKGHGD-SVYSASFSPDGKLIVTASIDR 300

Query: 369 EKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                 V    G    +L     ++    +S  G  ++ +    
Sbjct: 301 TA---RVWDATGKVIGKLEGHQGSVNNAKFSFDGTQIVTASSDG 341



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 49/285 (17%), Positives = 101/285 (35%), Gaps = 43/285 (15%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           R+WD+  ++ +  K    +              +Y +     G +          +++  
Sbjct: 139 RIWDISGKQLVELKGHQGN--------------VYSANFSSDGKW----------IITAS 174

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              +  + D  G  I  +T   + I+    FS + +++  A+ D    +          +
Sbjct: 175 ADKTARIWDISGQQIAQIT-GHENIVTSANFSSDGKRIITASADKTACMW-----DLSGK 228

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              ++      + +  FS +G+R + +   D+   ++  DL       L        SAS
Sbjct: 229 LLVQLKGHTDTVWSANFSPDGQRIV-TASDDKTARVW--DLSGKVLAELKGHGDSVYSAS 285

Query: 309 YSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +SPD   IV  S DR  +    V  + G    ++ +  + S  +  +S  G  I      
Sbjct: 286 FSPDGKLIVTASIDRTAR----VWDATGKVIGKL-EGHQGSVNNAKFSFDGTQIVTASSD 340

Query: 368 GEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           G    I +          LL     + + ++SP G+ +I + K  
Sbjct: 341 GS---ILIWNTSKKIFIELLGHLGEVFSASFSPDGKQIITTSKDG 382



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 76/240 (31%), Gaps = 32/240 (13%)

Query: 191 NSLCVMDRDGA-------NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             +    +DG        N +         +    FSPN + +   + +        + D
Sbjct: 373 KQIITTSKDGTVRIWNTLNKQITEIKAQVAVQSANFSPNGKLIVTTSSEK----FAQVWD 428

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T      +  G+   +  A  FS +GK  + +   D    I+  D+       L      
Sbjct: 429 TSGKILTELKGHESRVNSA-TFSPDGKFIV-TASDDTTARIW--DISGKLLTELKADHGR 484

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIA 362
            +SA++S D  QI+  S        ++  ++G    ++  +  + S     +S    LI 
Sbjct: 485 VVSANFSYDGKQIITGS----GNTAFIWNTSGKLISKLELKGPQYSVISANFSRDRQLIV 540

Query: 363 FTKFSGEKFAIGVMKKDGSQERLL---------VEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                G      +    G     +           ++ +    ++P G+ L+      G 
Sbjct: 541 TASHDGSA---WIWDSSGKVITKIEFPNNITENYSENRVYGADFTPDGKYLVTVTSDGGR 597



 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 76/230 (33%), Gaps = 25/230 (10%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+G    ++ + D  G  +       +  +    FS + + +   +    D  RV+    
Sbjct: 686 VTGSKSGNVKIWDTSGK-LLNELRGHEYQINGINFSSDGKSILTVSL---DFARVWSNSG 741

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           ++    K      + + +   S +GK  +++       + Y  D        L       
Sbjct: 742 KLLAEIKGKQKHDAALTSASLSPDGK-LIVTGYSSFQQNAYLWDSSGKQQMELQGHQNFV 800

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPD   IV  SD    E   +  + G     + +   +      +SP G  I  T
Sbjct: 801 NSVNFSPDGKLIVTASD---DETACIWDTTGKLLNEL-KGNSSKVKSASFSPDGKKIITT 856

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---------TWSPSGRSLI 405
              G      +    G     L+   N+  P          +SP GR +I
Sbjct: 857 SSDGTAI---IWDTFGK----LLAKFNIGFPISSYSSTRVNFSPDGRFII 899



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/234 (18%), Positives = 81/234 (34%), Gaps = 25/234 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                +F   FSP+ +++   + D    +R++    +     K     +S      FS N
Sbjct: 358 GHLGEVFSASFSPDGKQIITTSKD--GTVRIWNTLNKQITEIKAQVAVQSAN----FSPN 411

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           GK  +++   ++   ++  D        L        SA++SPD   IV  SD       
Sbjct: 412 GK-LIVTTSSEKFAQVW--DTSGKILTELKGHESRVNSATFSPDGKFIVTASD---DTTA 465

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERL 385
            +   +G     +  D         +S  G  I     +G      +    G   S+  L
Sbjct: 466 RIWDISGKLLTELKADH-GRVVSANFSYDGKQII----TGSGNTAFIWNTSGKLISKLEL 520

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                ++ +  +S   R LI +   DG      +  D +G+  T I  P   ++
Sbjct: 521 KGPQYSVISANFSRD-RQLIVTASHDGSA----WIWDSSGKVITKIEFPNNITE 569



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/235 (20%), Positives = 93/235 (39%), Gaps = 25/235 (10%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            + D  G   +         +    FSP+ + +  A+ D+       + DT      +  
Sbjct: 781 YLWDSSGK-QQMELQGHQNFVNSVNFSPDGKLIVTASDDETAC----IWDTTGKLLNELK 835

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN----ISASY 309
           GN  S + +  FS +GK+  I+   D    I+  D       +      I+       ++
Sbjct: 836 GNS-SKVKSASFSPDGKKI-ITTSSDGTAIIW--DTFGKLLAKFNIGFPISSYSSTRVNF 891

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   I+ + +  G  +L+     G+D   IS D+  S  +  +SP G LIA  +  G 
Sbjct: 892 SPDGRFIIAQIE-GGFTRLW-----GADGTVISTDE--SLGNITFSPDGKLIAIVRR-GG 942

Query: 370 KFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             ++G+   +  +  +L +E   +Q   +S + +  +   +    +  K+   D+
Sbjct: 943 SASVGI--PEEKKLAILQIEPYLVQRVIFSHNSKFFVTISEIPFSSVDKIQVWDV 995



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 59/156 (37%), Gaps = 18/156 (11%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              +L        SAS+SPD   IV            V   +G     +    +++ +  
Sbjct: 65  EERQLKGHEGSVNSASFSPDDKLIV---TAGADNTARVWDFSGKQLVELI-GHQSNVYSA 120

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
            +SP G LI    F G      +    G Q   L     N+ +  +S  G+ +I +    
Sbjct: 121 NFSPDGKLIVTASFDGTA---RIWDISGKQLVELKGHQGNVYSANFSSDGKWIITAS--- 174

Query: 412 GDTGSKLYSID------LNGRNETLINTPAYASDPQ 441
            D  ++++ I       + G +E ++ +  ++SD +
Sbjct: 175 ADKTARIWDISGQQIAQITG-HENIVTSANFSSDGK 209



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 55/344 (15%), Positives = 100/344 (29%), Gaps = 53/344 (15%)

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDR--KQIIGKKFFSSPASWR--- 152
             + AQV V          +L V        ++WD   +   ++ G +   + A++    
Sbjct: 395 TEIKAQVAVQ-SANFSPNGKLIVTTSSEKFAQVWDTSGKILTELKGHESRVNSATFSPDG 453

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL------ 206
           K   T SDD    I    G   + +      VVS         +     N  ++      
Sbjct: 454 KFIVTASDDTTARIWDISGKLLTELKADHGRVVSANFSYDGKQIITGSGNTAFIWNTSGK 513

Query: 207 ------TPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVYLMDTRIDRAPKRIGNFRSM 259
                        +    FS ++Q +  A++D    I             P  I    S 
Sbjct: 514 LISKLELKGPQYSVISANFSRDRQLIVTASHDGSAWIWDSSGKVITKIEFPNNITENYSE 573

Query: 260 I--LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                  F+ +GK  +        +     D+               I+ S SPD  Q++
Sbjct: 574 NRVYGADFTPDGKYLVTVTSDGGRVW----DISGKLIAEFKGHQDEVINFSLSPDGKQML 629

Query: 318 FESDREGKEQLYVMQSNGSDQKRI---------------SQDKEASYFDPVWSPQGDLIA 362
             SD      + V   +     +I                +D++ S     +SP      
Sbjct: 630 TASD---DRTVRVWDISNKSLAQINSSQIPSTNNQTKLQYKDEDKSITSLAFSPDNQFFV 686

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
               SG    + +    G     L   +  +    +S  G+S++
Sbjct: 687 TGSKSG---NVKIWDTSGKLLNELRGHEYQINGINFSSDGKSIL 727


>gi|325067838|ref|ZP_08126511.1| WD-40 repeat-containing protein [Actinomyces oris K20]
          Length = 795

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/329 (14%), Positives = 108/329 (32%), Gaps = 40/329 (12%)

Query: 129 RLWDVKDRKQII--------GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
           R+WDV    +++        G+     P         I     + +TG     +SR +  
Sbjct: 175 RVWDVTTGTELLRVGPMAFVGRGATMGPDGRPTHVGPI-----EPMTGLSWSPDSRRIIT 229

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +       + ++       G  +  L     + +    +SP+  ++     DD      +
Sbjct: 230 AFDSAEPRVWDA-----ATGEEVLSLHGRERRWVSVVSWSPDGSRII---TDDISGTTAH 281

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D         +        A  +S +  R   +   D+ + ++  D  +    +L   
Sbjct: 282 IWDAATGEELLSLRGHHQWACALAWSPDSSRVA-TGSHDDTVRVW--DAATGQ-TQLVLG 337

Query: 301 LFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              ++   S+SPD +++   +   G     V  +   + +    +      + VWSP G 
Sbjct: 338 AGNSVETVSWSPDGTKLSIGAKIGGN---RVWDATTGEPRLTVDNGARELSEVVWSPDGT 394

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A + +   +  I +    G   + L    +      WSP    ++      GD  + +
Sbjct: 395 RLATSSYLSPRVLI-LDASTGDVVQALTAGEDDVNDIAWSPDSERIL---TGLGDDRAAI 450

Query: 419 YSIDLNGRNETLINTPAYA---SDPQWVG 444
           +      R E L+    ++   +   W  
Sbjct: 451 WDA---ARGERLLTLEGHSDMITSVAWSP 476



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 90/284 (31%), Gaps = 41/284 (14%)

Query: 186 SGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           +    +S+ V D   GA++  L      +     +SP+  ++  +  D        + D 
Sbjct: 82  TAAEDHSVRVWDATTGADLLTLGVGGSGVGGAVAWSPDSTRILTSFDDA----SARIWDA 137

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--------- 295
              +  + +      + A  +S +G R   +   D    ++ V   +             
Sbjct: 138 SSGQVVRTLSGHTEHLTAVSWSPDGTRVA-TASDDGTARVWDVTTGTELLRVGPMAFVGR 196

Query: 296 --------RLTNTLFIN--ISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQ 343
                   R T+   I      S+SPDS +I   F+S      +  V  +   ++     
Sbjct: 197 GATMGPDGRPTHVGPIEPMTGLSWSPDSRRIITAFDS-----AEPRVWDAATGEEVLSLH 251

Query: 344 DKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPS 400
            +E  +   V WSP G  I     SG    I        +E L +   +  A    WSP 
Sbjct: 252 GRERRWVSVVSWSPDGSRIITDDISGTTAHIW--DAATGEELLSLRGHHQWACALAWSPD 309

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              +      D     +++     G+ + ++          W  
Sbjct: 310 SSRVATGSHDD---TVRVWDA-ATGQTQLVLGAGNSVETVSWSP 349



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 86/263 (32%), Gaps = 37/263 (14%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L       L+   +SP+  ++   ++D        + D         +      I A  
Sbjct: 17  SLYAGHFDALWGVAWSPDGTRLLSGSHDG----TARVWDASRGTELFALAGPSLSISAVA 72

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDR 322
           +S +G R L +  +D ++ ++  D  + A           +  + ++SPDS++I+  S  
Sbjct: 73  WSPDGTRLL-TAAEDHSVRVW--DATTGADLLTLGVGGSGVGGAVAWSPDSTRIL-TSFD 128

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +   +++   ++     R             WSP G  +A     G    +  +      
Sbjct: 129 DASARIW--DASSGQVVRTLSGHTEHLTAVSWSPDGTRVATASDDGTA-RVWDVTTGTEL 185

Query: 383 ERL----LVEDSNLQAP----------------TWSPSGRSLIFSRKKDGDTGSKLYS-- 420
            R+     V       P                +WSP  R +I +            +  
Sbjct: 186 LRVGPMAFVGRGATMGPDGRPTHVGPIEPMTGLSWSPDSRRIITAFDSAEPRVWDAATGE 245

Query: 421 --IDLNGRNETLINTPAYASDPQ 441
             + L+GR    ++  +++ D  
Sbjct: 246 EVLSLHGRERRWVSVVSWSPDGS 268



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 96/311 (30%), Gaps = 37/311 (11%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQ--IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            +          R+WD    +   ++G        SW      +S  I   I G +  ++
Sbjct: 311 SRVATGSHDDTVRVWDAATGQTQLVLGAGNSVETVSWSPDGTKLS--IGAKIGGNR-VWD 367

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDG--------------------ANIRYLTPSRDQIL 214
           +       +V +G  + S  V   DG                     ++     + +  +
Sbjct: 368 ATTGEPRLTVDNGARELSEVVWSPDGTRLATSSYLSPRVLILDASTGDVVQALTAGEDDV 427

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            +  +SP+ +++     DD    R  + D         +     MI +  +S NG+R  +
Sbjct: 428 NDIAWSPDSERILTGLGDD----RAAIWDAARGERLLTLEGHSDMITSVAWSPNGQR-AL 482

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +  +D    I+  D  +      T T        ++    ++V     +G   ++     
Sbjct: 483 TGSQDGTARIW--DAATGEVIH-TYTGNWVRDVVWTQGGPRVV-TGSADGAAHVW--DVI 536

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            S +    +D  A      WSP G  +    F      +           L      +  
Sbjct: 537 TSGELVTLRDDAAMVRSYAWSPDGSKVL-AGFDDGVVRVWDEVSGKIVLSLAGHRFGVTD 595

Query: 395 PTWSPSGRSLI 405
             WSP G  ++
Sbjct: 596 AQWSPDGTRIL 606



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 80/242 (33%), Gaps = 22/242 (9%)

Query: 161 DIYQSITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+ Q++T  + D N       SE +++G+  +   + D               ++    +
Sbjct: 415 DVVQALTAGEDDVNDIAWSPDSERILTGLGDDRAAIWDAARGERLLTLEGHSDMITSVAW 474

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN Q+    + D     R++   T             + +    ++  G R +++   D
Sbjct: 475 SPNGQRALTGSQD--GTARIWDAATGEVIH----TYTGNWVRDVVWTQGGPR-VVTGSAD 527

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            A  ++ V + S     L +   +  S ++SPD S+ V     +G  +++          
Sbjct: 528 GAAHVWDV-ITSGELVTLRDDAAMVRSYAWSPDGSK-VLAGFDDGVVRVW--DEVSGKIV 583

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                      D  WSP G  I      G    + +      +   L          + P
Sbjct: 584 LSLAGHRFGVTDAQWSPDGTRILTGSEDGT---VRLWDATTGEMTGLFL-------CFLP 633

Query: 400 SG 401
            G
Sbjct: 634 DG 635


>gi|159479442|ref|XP_001697802.1| hypothetical protein CHLREDRAFT_120222 [Chlamydomonas reinhardtii]
 gi|158274170|gb|EDO99954.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 293

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 80/239 (33%), Gaps = 14/239 (5%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             D  +    +SP+  K+A    D      V + D         +      +    +S +
Sbjct: 1   GHDGSVLAVAWSPDGSKLASGGLDT----TVKVWDAVGGACLLTLTGHSGRVCGVAWSPD 56

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDREGK 325
           G   + S   D  + +++V+     +  LTN         S ++SPD SQ+V  +  +G 
Sbjct: 57  GAMLV-SGGWDGGLRLWNVEAGETPSRCLTNMKGHTAPVKSVAWSPD-SQMVMSAGWDGS 114

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            +L+   S       + ++   +     WSP G  +A   + G                 
Sbjct: 115 IRLW--DSRSGGSVAVLKEHSENVRHVSWSPDGRRVASCSWRGCVQVWDAEPAARDAGGG 172

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               + ++   W+P G+ L        D   ++++    G    +     Y +   W  
Sbjct: 173 AGHTALVRTLAWAPDGKLLA---SGAWDCTVRVWNPSSGGCLMAIEAHKDYIAHMSWSP 228



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 73/232 (31%), Gaps = 17/232 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG +  ++ V D  G             +    +SP+   +    +D      + L +  
Sbjct: 20  SGGLDTTVKVWDAVGGACLLTLTGHSGRVCGVAWSPDGAMLVSGGWDGG----LRLWNVE 75

Query: 246 IDRAPKR-IGNFRSMIL---APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
               P R + N +       +  +S +  + ++S   D ++ ++       +   L    
Sbjct: 76  AGETPSRCLTNMKGHTAPVKSVAWSPD-SQMVMSAGWDGSIRLWD-SRSGGSVAVLKEHS 133

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 S+SPD  ++   S R G  Q++  +    D         A      W+P G L+
Sbjct: 134 ENVRHVSWSPDGRRVASCSWR-GCVQVWDAEPAARDAGG-GAGHTALVRTLAWAPDGKLL 191

Query: 362 AFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           A   +      + V           +      +   +WSP    L  +    
Sbjct: 192 ASGAWDCT---VRVWNPSSGGCLMAIEAHKDYIAHMSWSPDSSQLATASWDG 240



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 67/188 (35%), Gaps = 9/188 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S+ V+S     S+ + D        +     + +    +SP+ ++VA  ++       V 
Sbjct: 103 SQMVMSAGWDGSIRLWDSRSGGSVAVLKEHSENVRHVSWSPDGRRVASCSWRG----CVQ 158

Query: 241 LMDTR-IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           + D     R         +++    ++ +GK    S   D  + +++          +  
Sbjct: 159 VWDAEPAARDAGGGAGHTALVRTLAWAPDGKLLA-SGAWDCTVRVWN-PSSGGCLMAIEA 216

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                   S+SPDSSQ+   +  +G  +L+    + ++     +    +     WS  G 
Sbjct: 217 HKDYIAHMSWSPDSSQLA-TASWDGDVRLWR-PRSSTECVGALEGHMGAVAAVQWSGDGR 274

Query: 360 LIAFTKFS 367
            +A   + 
Sbjct: 275 RLASGSWD 282


>gi|322369089|ref|ZP_08043655.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
 gi|320551312|gb|EFW92960.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
          Length = 681

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 102/313 (32%), Gaps = 89/313 (28%)

Query: 218 RFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+  ++A+        +D+    ++++ +     P R+    S   +P++S +G + 
Sbjct: 20  ALSPDGDRIAFVADEFDESEDDRRTSLFVVPSDGSDDPYRLSR-ASDAGSPKWSPDGAKL 78

Query: 273 LISVQKDEA------------------------------MDIYSVD-LQSNATERLTNTL 301
                +DE                                 ++  D ++     ++T+  
Sbjct: 79  AFLAARDEDVSLSVRADDTDEDGDEDEADEANGADDEPKPQVWLFDMVRGGDARQITDRE 138

Query: 302 FINISASYSPDSSQIVFESD-------------REGKE---------------------Q 327
                  + PD  ++V  S              R+G                        
Sbjct: 139 EGVREFDWGPDGDRLVVSSRDPTETERDYLADLRDGGPVETERLQHRFDGEGFLDDVTTY 198

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVW----SPQGDLIAFTKFS------GEKFAIGVMK 377
           L+V+     D +R+        ++P++    +   D IAF               +  + 
Sbjct: 199 LFVVDVETRDSRRLDDAYGGGAYEPMFGLQPAWGADRIAFLSNRTDRPDDSGVMDVYTIA 258

Query: 378 KDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTG--SKLYSIDLNGR----NETL 430
            DGS  R + +     A P WSP G  L F+     +T   ++LY  D +G      E+L
Sbjct: 259 PDGSDLRTVTDSDLAAAGPRWSPDGSRLAFAVDDPVNTHIPTQLYVAD-DGDYRSVTESL 317

Query: 431 INTPAYASDPQWV 443
             T A +   +WV
Sbjct: 318 DRTLARSRRFRWV 330



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/295 (18%), Positives = 101/295 (34%), Gaps = 84/295 (28%)

Query: 175 SRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            RI FV++         + SL V+  DG++  Y   SR      P++SP+  K+A+    
Sbjct: 26  DRIAFVADEFDESEDDRRTSLFVVPSDGSDDPYRL-SRASDAGSPKWSPDGAKLAFLAAR 84

Query: 233 DEDI-----------------------------LRVYLMDTRIDRAPKRIGNFRSMILAP 263
           DED+                              +V+L D       ++I +    +   
Sbjct: 85  DEDVSLSVRADDTDEDGDEDEADEANGADDEPKPQVWLFDMVRGGDARQITDREEGVREF 144

Query: 264 RFSSNGKRALISVQ-------------KDEAM---------------------DIYSVDL 289
            +  +G R ++S +             +D                         ++ VD+
Sbjct: 145 DWGPDGDRLVVSSRDPTETERDYLADLRDGGPVETERLQHRFDGEGFLDDVTTYLFVVDV 204

Query: 290 QSNATERLTNTLF-------INISASYSPDSSQIVFESDR------EGKEQLYVMQSNGS 336
           ++  + RL +            +  ++  D  +I F S+R       G   +Y +  +GS
Sbjct: 205 ETRDSRRLDDAYGGGAYEPMFGLQPAWGAD--RIAFLSNRTDRPDDSGVMDVYTIAPDGS 262

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI--GVMKKDGSQERLLVED 389
           D + ++ D + +   P WSP G  +AF         I   +   D    R + E 
Sbjct: 263 DLRTVT-DSDLAAAGPRWSPDGSRLAFAVDDPVNTHIPTQLYVADDGDYRSVTES 316



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 44/322 (13%), Positives = 100/322 (31%), Gaps = 86/322 (26%)

Query: 183 SVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +      K  + + D   G + R +T   + +     + P+  ++  ++ D  +  R YL
Sbjct: 110 NGADDEPKPQVWLFDMVRGGDARQITDREEGVREF-DWGPDGDRLVVSSRDPTETERDYL 168

Query: 242 MDTRID--------------------------------RAPKRIGNFRS-------MILA 262
            D R                                  R  +R+ +            L 
Sbjct: 169 ADLRDGGPVETERLQHRFDGEGFLDDVTTYLFVVDVETRDSRRLDDAYGGGAYEPMFGLQ 228

Query: 263 PRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P + ++  R      + +  D      +Y++    +    +T++        +SPD S++
Sbjct: 229 PAWGAD--RIAFLSNRTDRPDDSGVMDVYTIAPDGSDLRTVTDSDLAAAGPRWSPDGSRL 286

Query: 317 VFESDREGKEQL--YVMQSNGSDQKRISQDKE---ASYFDPVWSPQGDLIAFTKFSGEKF 371
            F  D      +   +  ++  D + +++  +   A      W   G L+A         
Sbjct: 287 AFAVDDPVNTHIPTQLYVADDGDYRSVTESLDRTLARSRRFRWVDDGTLLAAV------- 339

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGR--------------SLIFSRKKDGDTGSK 417
                  D    RL+   ++  +P ++   +              ++ F     G  G  
Sbjct: 340 ------GDEGSTRLVRCSADEGSPAFTFDSQGDYRTVQTFDFADETVAFLLTDPGTVG-D 392

Query: 418 LYSIDLN----GRNETLINTPA 435
           LY++D +    G    + +  A
Sbjct: 393 LYAMDADELDAGEPARVTDCNA 414



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/358 (13%), Positives = 108/358 (30%), Gaps = 52/358 (14%)

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
           +F+++     +Q     + +  F DW   G +++V+ R   E +     + R        
Sbjct: 122 LFDMVRGGDARQITDREEGVREF-DWGPDGDRLVVSSRDPTETERDYLADLR-------- 172

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
                     P    ++ H             +G  +    ++    V       L    
Sbjct: 173 -------DGGPVETERLQHRF---------DGEGFLDDVTTYLFVVDVETRDSRRLDDAY 216

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRI 253
             GA              +P +  +  ++A+ +   +      +MD           + +
Sbjct: 217 GGGA-------YEPMFGLQPAWGAD--RIAFLSNRTDRPDDSGVMDVYTIAPDGSDLRTV 267

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERLT----NTLFINISA 307
            +       PR+S +G R   +V       I +            +T     TL  +   
Sbjct: 268 TDSDLAAAGPRWSPDGSRLAFAVDDPVNTHIPTQLYVADDGDYRSVTESLDRTLARSRRF 327

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKF 366
            +  D + +    D EG  +L    ++       + D +  Y     +    + +AF   
Sbjct: 328 RWVDDGTLLAAVGD-EGSTRLVRCSADEGSPA-FTFDSQGDYRTVQTFDFADETVAFLLT 385

Query: 367 SGEKF-AIGVMK---KDGSQERLLVEDSNLQAPTWSPSG-RSLIFSRKKDGDTGSKLY 419
                  +  M     D  +   + + +      +  SG R +++S + D +    +Y
Sbjct: 386 DPGTVGDLYAMDADELDAGEPARVTDCNAAFEERYDTSGCRRVVYSNEADDEIEGIVY 443


>gi|189210756|ref|XP_001941709.1| vegetative incompatibility protein HET-E-1 [Pyrenophora
            tritici-repentis Pt-1C-BFP]
 gi|187977802|gb|EDU44428.1| vegetative incompatibility protein HET-E-1 [Pyrenophora
            tritici-repentis Pt-1C-BFP]
          Length = 1371

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 86/249 (34%), Gaps = 18/249 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V S     ++ + D      R        ++    FSP+ Q VA A+ D      V L +
Sbjct: 1044 VASISRDTTVRLWDAGTGTCRSTLEGHSDLVTAVVFSPDGQLVASASEDS----TVRLWE 1099

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                     +     ++ A  FS +G + + S+ +D  + ++           L     +
Sbjct: 1100 AGTGTCRSMLEGHSDLVTAVAFSPDG-QLVASISRDTTVRLWEA-GTGTCRSTLEGHSDL 1157

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              +  +SPD   +   S     + + + ++     +   +         V+SP G L+A 
Sbjct: 1158 VTAVVFSPDGQLVASASS---DKTVRLWEAGTGTCRSTLEGHSLCVRAVVFSPDGQLVAS 1214

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                     I + +      R  +E     ++A  +SP G+ +  +     +   +L+  
Sbjct: 1215 ASSD----KIRLWEAWTGTCRSTLEGHSGWVRAVAFSPDGQLVASASW---NKTVRLWEA 1267

Query: 422  DLNGRNETL 430
                R  TL
Sbjct: 1268 ATGTRRSTL 1276



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 79/219 (36%), Gaps = 17/219 (7%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +R +      ++    FSP+ Q VA  + D      V L +         +     ++ A
Sbjct: 937  VRLMLEGHSDLVTAVAFSPDGQLVASISRDT----TVRLWEAGTGTCRSTLEGHSGLVTA 992

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              FS +G+    S   D+ + ++           L     +  + ++SPD   +   S R
Sbjct: 993  VAFSPDGQLIA-SASSDKTVRLWEA-GTGTCRSTLEGHSGLVTAVAFSPDGQLVASIS-R 1049

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            +   +L+   +     +   +         V+SP G L+A          + + +     
Sbjct: 1050 DTTVRLW--DAGTGTCRSTLEGHSDLVTAVVFSPDGQLVASASEDST---VRLWEAGTGT 1104

Query: 383  ERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             R ++E  +    A  +SP G+ +    +   DT  +L+
Sbjct: 1105 CRSMLEGHSDLVTAVAFSPDGQLVASISR---DTTVRLW 1140



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 81/238 (34%), Gaps = 27/238 (11%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V S    +++ + +      R        ++    FSP+ Q +A  ++D           
Sbjct: 886  VASASEDSTVRLWEAGTGTCRSTLEGHCNVVTAVAFSPDGQLIASTSWDK---------- 935

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                     +     ++ A  FS +G + + S+ +D  + ++           L     +
Sbjct: 936  ----TVRLMLEGHSDLVTAVAFSPDG-QLVASISRDTTVRLWEA-GTGTCRSTLEGHSGL 989

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              + ++SPD   I   S     + + + ++     +   +          +SP G L+A 
Sbjct: 990  VTAVAFSPDGQLIASASS---DKTVRLWEAGTGTCRSTLEGHSGLVTAVAFSPDGQLVAS 1046

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                     + +        R  +E  +    A  +SP G+ +  + +   D+  +L+
Sbjct: 1047 ISRDTT---VRLWDAGTGTCRSTLEGHSDLVTAVVFSPDGQLVASASE---DSTVRLW 1098



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 109/348 (31%), Gaps = 56/348 (16%)

Query: 75   RSDVFNLISQDSFKQKITNPDSIPRFQDW---------NSLGAQVLVTGRVIKEGKDRLR 125
             S +   ++     Q I +  S    + W            G   LVT  V      +L 
Sbjct: 986  HSGLVTAVAFSPDGQLIASASSDKTVRLWEAGTGTCRSTLEGHSGLVT-AVAFSPDGQLV 1044

Query: 126  VEF------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     RLWD                 + R      SD +   +    G        
Sbjct: 1045 ASISRDTTVRLWDAGTG-------------TCRSTLEGHSDLVTAVVFSPDG-------- 1083

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              + V S    +++ + +      R +      ++    FSP+ Q VA  + D      V
Sbjct: 1084 --QLVASASEDSTVRLWEAGTGTCRSMLEGHSDLVTAVAFSPDGQLVASISRDT----TV 1137

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             L +         +     ++ A  FS +G + + S   D+ + ++     +        
Sbjct: 1138 RLWEAGTGTCRSTLEGHSDLVTAVVFSPDG-QLVASASSDKTVRLWE--AGTGTCRSTLE 1194

Query: 300  TLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               + + A  +SPD   +   S     +++ + ++     +   +          +SP G
Sbjct: 1195 GHSLCVRAVVFSPDGQLVASAS----SDKIRLWEAWTGTCRSTLEGHSGWVRAVAFSPDG 1250

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSL 404
             L+A   ++     + + +      R  ++    ++    +SP G +L
Sbjct: 1251 QLVASASWNKT---VRLWEAATGTRRSTLDLHFKDISYIVFSPDGHAL 1295



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 86/238 (36%), Gaps = 27/238 (11%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V S    +++ + +      R        ++    FSP+ Q VA  ++D+     V L +
Sbjct: 760 VASASEDSTVRLWEAGTGTCRSTLEGHCNVVTAVAFSPDGQLVASTSWDE----TVRLWE 815

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTL 301
                    +    +++ A  FS +G + + S   D  + ++          R  L    
Sbjct: 816 AGTGTCRSTLEGHCNVVTAVAFSPDG-QLVASASFDTTVRLWE---AGTGMCRSTLEGHS 871

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +  + ++SPD   +   S+      + + ++     +   +          +SP G LI
Sbjct: 872 DLVTAVAFSPDGQLVASASE---DSTVRLWEAGTGTCRSTLEGHCNVVTAVAFSPDGQLI 928

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           A T +      + +M  +G           + A  +SP G+ +    +   DT  +L+
Sbjct: 929 ASTSWDKT---VRLM-LEG-------HSDLVTAVAFSPDGQLVASISR---DTTVRLW 972



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 73/210 (34%), Gaps = 18/210 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R         +    FSP+ Q VA A+ D      V L +         +    +++ A
Sbjct: 737 CRSTLEGHSSYVTAVAFSPDGQLVASASEDS----TVRLWEAGTGTCRSTLEGHCNVVTA 792

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFES 320
             FS +G + + S   DE + ++        T R T     N   + ++SPD   +   S
Sbjct: 793 VAFSPDG-QLVASTSWDETVRLWE---AGTGTCRSTLEGHCNVVTAVAFSPDGQLVASAS 848

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + + ++     +   +          +SP G L+A          + + +   
Sbjct: 849 F---DTTVRLWEAGTGMCRSTLEGHSDLVTAVAFSPDGQLVASASEDST---VRLWEAGT 902

Query: 381 SQERLLVED--SNLQAPTWSPSGRSLIFSR 408
              R  +E   + + A  +SP G+ +  + 
Sbjct: 903 GTCRSTLEGHCNVVTAVAFSPDGQLIASTS 932



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 77/207 (37%), Gaps = 19/207 (9%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           F+P +  +   + +   E +  + + +   D     +    S + A  FS +G + + S 
Sbjct: 705 FAPERSLIRQTFVSQVPEKVKMLSMKEAGWDACRSTLEGHSSYVTAVAFSPDG-QLVASA 763

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +D  + ++        T R T     N   + ++SPD   +   S     E + + ++ 
Sbjct: 764 SEDSTVRLWE---AGTGTCRSTLEGHCNVVTAVAFSPDGQLVASTS---WDETVRLWEAG 817

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-- 392
               +   +          +SP G L+A   F      + + +      R  +E  +   
Sbjct: 818 TGTCRSTLEGHCNVVTAVAFSPDGQLVASASFDTT---VRLWEAGTGMCRSTLEGHSDLV 874

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            A  +SP G+ +  + +   D+  +L+
Sbjct: 875 TAVAFSPDGQLVASASE---DSTVRLW 898


>gi|218437712|ref|YP_002376041.1| hypothetical protein PCC7424_0717 [Cyanothece sp. PCC 7424]
 gi|218170440|gb|ACK69173.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 1348

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 96/259 (37%), Gaps = 27/259 (10%)

Query: 168  GEKGDFNSRILFVSES----VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
             E   ++++I+   ++      S      L    ++  N++ L            FSPN 
Sbjct: 987  HENWIWDTKIISKGQNQTIASASKDGTVRLWQWQQNEQNLKQLLLKDKGTDI--AFSPNG 1044

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            Q VA A  D+        +     +  +        +    FS +G+    SV +D+ + 
Sbjct: 1045 QIVAIANIDN-------TVQLWNGKKLRTFSGHEGKVWGVNFSPDGQTLA-SVGEDKLIK 1096

Query: 284  IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            ++  DL+++ +  L        S  +SPD   I   S     ++   + S         +
Sbjct: 1097 LW--DLKNHQSRTLKGHQDKVWSVKFSPDGKIIASAS----SDRTVKLWSFEGQLLNTLK 1150

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGR 402
            +         +SP G LIA   F+G    + +    G   R       ++   ++SP+G+
Sbjct: 1151 ENLGEIHAVSFSPDGTLIALGGFNG---QVALFSPQGQLLRKFDAHPDSIFELSFSPNGK 1207

Query: 403  SLIFSRKKDGDTGSKLYSI 421
             L  +    GD   KL+++
Sbjct: 1208 MLATAS---GDKTVKLWNL 1223



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 71/228 (31%), Gaps = 20/228 (8%)

Query: 198  RDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
             D  N +          ++  +FSP+ + +A A+ D      V L             N 
Sbjct: 1098 WDLKNHQSRTLKGHQDKVWSVKFSPDGKIIASASSDR----TVKLWSFEGQLLNTLKENL 1153

Query: 257  RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               I A  FS +G    +         +     Q     +           S+SP+   +
Sbjct: 1154 -GEIHAVSFSPDGTLIAL---GGFNGQVALFSPQGQLLRKFDAHPDSIFELSFSPNGKML 1209

Query: 317  VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
               S   G + + +    G   + +     +S +   +SP G  I           I   
Sbjct: 1210 ATAS---GDKTVKLWNLQGQVLETLI-GHRSSIYRVKFSPDGKFIVTASADNTA-KIW-- 1262

Query: 377  KKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              DG   +      + +     SP G++L        D  + LYS+DL
Sbjct: 1263 SLDGRVVQTFTTHSAAVNGIDISPDGKTLA---TVSSDKSAILYSLDL 1307



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 53/270 (19%), Positives = 101/270 (37%), Gaps = 22/270 (8%)

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            D  + I F     +  I      V   +G  +R  +   +  ++   FSP+ Q +A    
Sbjct: 1033 DKGTDIAFSPNGQIVAIANIDNTVQLWNGKKLRTFS-GHEGKVWGVNFSPDGQTLASVGE 1091

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D      + L D + +   + +   +  + + +FS +GK    S   D  + ++S   + 
Sbjct: 1092 DK----LIKLWDLK-NHQSRTLKGHQDKVWSVKFSPDGKIIA-SASSDRTVKLWSF--EG 1143

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                 L   L    + S+SPD + I       G      + S      R       S F+
Sbjct: 1144 QLLNTLKENLGEIHAVSFSPDGTLIAL----GGFNGQVALFSPQGQLLRKFDAHPDSIFE 1199

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              +SP G ++A          + +    G   E L+   S++    +SP G+ ++ +   
Sbjct: 1200 LSFSPNGKMLATAS---GDKTVKLWNLQGQVLETLIGHRSSIYRVKFSPDGKFIVTAS-- 1254

Query: 411  DGDTGSKLYSIDLNGRNETLINTPAYASDP 440
              D  +K++S  L+GR      T + A + 
Sbjct: 1255 -ADNTAKIWS--LDGRVVQTFTTHSAAVNG 1281



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 77/226 (34%), Gaps = 23/226 (10%)

Query: 191 NSLCVMDRDGANIRY--------LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           N +     DG  I +           + D +++   FSP+ + +A  + D     +++  
Sbjct: 750 NYIATAHNDGTVILWNENGSQYKQFKAHDGLVWGISFSPDGRYLASVSAD--KTAKLWTE 807

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + ++ +  +        +    FS +G+   ++   +    +    L     + L     
Sbjct: 808 NGQLVKIFQTGKEGYGEVSDVSFSPDGEIIAVT---NGNKTVTLYRLNGQLFKTLEGHNG 864

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S  +SPD+  +   S  +G   + +    G   K +   ++  +    +SP    + 
Sbjct: 865 QVWSVKFSPDNKMLA-SSSADGT--IKLWDKEGKLLKTLEGHQDWIWTVN-FSPDSQRLV 920

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLI 405
                G    I +     ++   L    +        +SP G+ +I
Sbjct: 921 SGSKDGT---IKLWNLKDNKPLSLSWKGDNDGVLSINFSPDGQGII 963



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 72/197 (36%), Gaps = 20/197 (10%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+      + +  +   G     +   D  + ++  +   +  ++      +    S+SP
Sbjct: 734 RLSAGHGAVFSVSYH--GNYIA-TAHNDGTVILW--NENGSQYKQFKAHDGLVWGISFSP 788

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   +   S  +   +L+          +  ++      D  +SP G++IA T       
Sbjct: 789 DGRYLASVS-ADKTAKLWTENGQLVKIFQTGKEGYGEVSDVSFSPDGEIIAVT---NGNK 844

Query: 372 AIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            + + + +G   + L   +  + +  +SP  + L  S   DG    KL+  D  G+   L
Sbjct: 845 TVTLYRLNGQLFKTLEGHNGQVWSVKFSPDNKMLA-SSSADGT--IKLW--DKEGK---L 896

Query: 431 INTPAYASDPQWVGFMD 447
           + T     D  W+  ++
Sbjct: 897 LKTLEGHQD--WIWTVN 911



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 13/182 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ +   +G  +  L  +  +I     FSP+   +A              + + 
Sbjct: 1129 SASSDRTVKLWSFEGQLLNTLKENLGEIHAV-SFSPDGTLIA-----LGGFNGQVALFSP 1182

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +  ++       I    FS NGK    +   D+ + ++  +LQ    E L        
Sbjct: 1183 QGQLLRKFDAHPDSIFELSFSPNGKMLA-TASGDKTVKLW--NLQGQVLETLIGHRSSIY 1239

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               +SPD     F           +   +G   +  +    A+      SP G  +A   
Sbjct: 1240 RVKFSPDGK---FIVTASADNTAKIWSLDGRVVQTFTT-HSAAVNGIDISPDGKTLATVS 1295

Query: 366  FS 367
              
Sbjct: 1296 SD 1297



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 85/268 (31%), Gaps = 57/268 (21%)

Query: 181  SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----- 234
            S+ +VSG    ++ + + +D   +       +  +    FSP+ Q +  +  D +     
Sbjct: 916  SQRLVSGSKDGTIKLWNLKDNKPLSLSWKGDNDGVLSINFSPDGQGIISSGVDKKVKIWN 975

Query: 235  ------------------------------------DILRVYLMDTRIDRAPKRIGNFRS 258
                                                  +R++          + +   + 
Sbjct: 976  LKGEQLETFEGHENWIWDTKIISKGQNQTIASASKDGTVRLWQWQQNEQNLKQLLLKDKG 1035

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
              +A  FS NG+   I+   D  + ++            +         ++SPD   +  
Sbjct: 1036 TDIA--FSPNGQIVAIA-NIDNTVQLW----NGKKLRTFSGHEGKVWGVNFSPDGQTLAS 1088

Query: 319  ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                 G+++L  +    + Q R  +  +   +   +SP G +IA          + +   
Sbjct: 1089 V----GEDKLIKLWDLKNHQSRTLKGHQDKVWSVKFSPDGKIIASASSDRT---VKLWSF 1141

Query: 379  DGSQERLLVED-SNLQAPTWSPSGRSLI 405
            +G     L E+   + A ++SP G  + 
Sbjct: 1142 EGQLLNTLKENLGEIHAVSFSPDGTLIA 1169



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 57/171 (33%), Gaps = 10/171 (5%)

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G     + +    G  +R      D I     FSPN + +A A+ D      V L + + 
Sbjct: 1171 GGFNGQVALFSPQGQLLRKFDAHPDSIFEL-SFSPNGKMLATASGDK----TVKLWNLQG 1225

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                  IG  RS I   +FS +GK  + +   D    I+S+D      +  T        
Sbjct: 1226 QVLETLIG-HRSSIYRVKFSPDGKFIV-TASADNTAKIWSLD--GRVVQTFTTHSAAVNG 1281

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
               SPD   +   S  +    LY +     +        +   F   W+  
Sbjct: 1282 IDISPDGKTLATVSS-DKSAILYSLDLAKLNSLANLNLDKLMNFACHWAGD 1331


>gi|189209021|ref|XP_001940843.1| vegetative incompatibility protein HET-E-1 [Pyrenophora
            tritici-repentis Pt-1C-BFP]
 gi|187976936|gb|EDU43562.1| vegetative incompatibility protein HET-E-1 [Pyrenophora
            tritici-repentis Pt-1C-BFP]
          Length = 1352

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 80/238 (33%), Gaps = 17/238 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V S     ++ + +      R         +    FSP+ Q VA A+ D      V L +
Sbjct: 856  VASASSDKTVRLWEAATGTCRSTLEGHSHHVTAVAFSPDGQLVASASSDK----TVRLWE 911

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                     +      + A  FS +G + + S   D+ + ++           L     +
Sbjct: 912  AATGMCRSTLEGHSDHVTAVTFSPDG-QLVTSASGDKTVRLWEA-ATGTCRSTLEGHSSV 969

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                ++SPD   +   S   G + + +  +     +   +          +SP G L+A 
Sbjct: 970  VNVVTFSPDGQLVASAS---GDKTVRLWVAATGTCRSTLEGHSDDVTAMAFSPDGQLVAS 1026

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                     + + +      R  +E  +  + A  +SP G+ +  +     D+  +L+
Sbjct: 1027 ASSDKT---VRLWEAATGTCRSTLEGHSEYVNAVAFSPDGQLVASASY---DSTVRLW 1078



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 76/237 (32%), Gaps = 13/237 (5%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V S     ++ + +      R        ++    FSP+ Q VA A+ D      V L  
Sbjct: 940  VTSASGDKTVRLWEAATGTCRSTLEGHSSVVNVVTFSPDGQLVASASGDK----TVRLWV 995

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                     +      + A  FS +G + + S   D+ + ++           L      
Sbjct: 996  AATGTCRSTLEGHSDDVTAMAFSPDG-QLVASASSDKTVRLWEA-ATGTCRSTLEGHSEY 1053

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              + ++SPD   +   S       + + ++     +   +          +SP G L+A 
Sbjct: 1054 VNAVAFSPDGQLVASASY---DSTVRLWEATTGMCRSTLEGHSREVRVVAFSPDGQLVAS 1110

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              +      +        +  L    S + A  +SP G+ +       GD   +L+ 
Sbjct: 1111 ASYDSTV-RLWEATAGTCRSTLEGHSSVVNAVAFSPDGQLVA---SASGDKTVRLWV 1163



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 84/228 (36%), Gaps = 24/228 (10%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V S    +++ + +      R       + +    FSP+ Q VA A+YD      V L +
Sbjct: 1066 VASASYDSTVRLWEATTGMCRSTLEGHSREVRVVAFSPDGQLVASASYDS----TVRLWE 1121

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                     +    S++ A  FS +G + + S   D+ + ++    ++  +  L +    
Sbjct: 1122 ATAGTCRSTLEGHSSVVNAVAFSPDG-QLVASASGDKTVRLWVAATRTCRST-LESHSDD 1179

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              + + SPD   +   S   G + + + ++     +   +      +   +SP G L+A 
Sbjct: 1180 VTAVAVSPDRQLVASAS---GDKIVRLWEAATGTCRSTLEGHSYYVWALAFSPDGQLVAS 1236

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSL 404
                     + + +      R     S  ++P+       +SP G+ L
Sbjct: 1237 AS---GDKTVWLWEAATGTCR-----SKFESPSGYITYIDFSPDGQVL 1276



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 101/294 (34%), Gaps = 26/294 (8%)

Query: 126  VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
            V   L+D   ++ ++  +   + A  +          Y ++        +R  FV + V 
Sbjct: 769  VSGFLYD--AKRFVLRFQSVLTDAPLQIY--------YSALVFAPERSLTRKTFV-DQVP 817

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
              +   S    D D    R       + +    FSP+ Q VA A+ D      V L +  
Sbjct: 818  ERVKMLSTKETDWD--ECRSTLEGHSKYVNAVAFSPDGQLVASASSDK----TVRLWEAA 871

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                   +      + A  FS +G + + S   D+ + ++           L        
Sbjct: 872  TGTCRSTLEGHSHHVTAVAFSPDG-QLVASASSDKTVRLWEA-ATGMCRSTLEGHSDHVT 929

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            + ++SPD   +   S   G + + + ++     +   +   +      +SP G L+A + 
Sbjct: 930  AVTFSPDGQLVTSAS---GDKTVRLWEAATGTCRSTLEGHSSVVNVVTFSPDGQLVA-SA 985

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
               +   + V      +  L     ++ A  +SP G+ +  +     D   +L+
Sbjct: 986  SGDKTVRLWVAATGTCRSTLEGHSDDVTAMAFSPDGQLVASASS---DKTVRLW 1036



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 76/238 (31%), Gaps = 17/238 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V S     ++ + +      R       + +    FSP+ Q VA A+YD      V L +
Sbjct: 1024 VASASSDKTVRLWEAATGTCRSTLEGHSEYVNAVAFSPDGQLVASASYDS----TVRLWE 1079

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                     +      +    FS +G + + S   D  + ++           L     +
Sbjct: 1080 ATTGMCRSTLEGHSREVRVVAFSPDG-QLVASASYDSTVRLWEA-TAGTCRSTLEGHSSV 1137

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              + ++SPD   +   S   G + + +  +     +   +           SP   L+A 
Sbjct: 1138 VNAVAFSPDGQLVASAS---GDKTVRLWVAATRTCRSTLESHSDDVTAVAVSPDRQLVAS 1194

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                     + + +      R  +E     + A  +SP G+ +       GD    L+
Sbjct: 1195 AS---GDKIVRLWEAATGTCRSTLEGHSYYVWALAFSPDGQLVA---SASGDKTVWLW 1246



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 74/206 (35%), Gaps = 15/206 (7%)

Query: 219 FSPNQQ--KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           F+P +   +  +     E +  +   +T  D     +      + A  FS +G + + S 
Sbjct: 801 FAPERSLTRKTFVDQVPERVKMLSTKETDWDECRSTLEGHSKYVNAVAFSPDG-QLVASA 859

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D+ + ++           L        + ++SPD   +   S     + + + ++   
Sbjct: 860 SSDKTVRLWEA-ATGTCRSTLEGHSHHVTAVAFSPDGQLVASASS---DKTVRLWEAATG 915

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQA 394
             +   +          +SP G L+  T  SG+K  + + +      R  +E  +  +  
Sbjct: 916 MCRSTLEGHSDHVTAVTFSPDGQLV--TSASGDK-TVRLWEAATGTCRSTLEGHSSVVNV 972

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYS 420
            T+SP G+ +       GD   +L+ 
Sbjct: 973 VTFSPDGQLVA---SASGDKTVRLWV 995


>gi|257387703|ref|YP_003177476.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halomicrobium mukohataei DSM 12286]
 gi|257170010|gb|ACV47769.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halomicrobium mukohataei DSM 12286]
          Length = 692

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 98/267 (36%), Gaps = 36/267 (13%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGI-IKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+ Q  T        R+ +V  +       + ++ V D  G  ++  T   + +  EPR+
Sbjct: 11  DLAQVSTPRLSPSGDRVAYVRRTPSDDSEYEATVYVADATGGEVQRFTL-AEGVDSEPRW 69

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  ++A+ +    D  +   +         ++ +    +    ++ +G+R     Q  
Sbjct: 70  SPSGDRLAFVSTRGADDRQQLWVVPTDGGEATQVTSVVGGVGQIAWAPDGERIAFVQQVT 129

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY---SPDSS---QIVF---ESDREG-KEQLY 329
           +A      DL               +   +   +PD     + V+   E  R+G + Q+Y
Sbjct: 130 DADREADRDL--------------EVEPDFEPETPDPRVVDRTVYRTAERYRDGRRSQVY 175

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-------AIGVMKKDGSQ 382
           +  ++G   +R++   +  +  P W   GD +   + +            I     D   
Sbjct: 176 LATADGEGVERVTT-ADRDHASPTWG-DGDTLYVARDADVADPDDSLATEIRAYDLDSGD 233

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             +  E +  Q PT + SGR + FS  
Sbjct: 234 SVVRHETTTFQ-PTLAASGRRVAFSYT 259



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 82/237 (34%), Gaps = 27/237 (11%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---Y 231
            R ++ +        ++ + +   DG  +  +T   D+    P +  +   +  A     
Sbjct: 156 DRTVYRTAERYRDGRRSQVYLATADGEGVERVTT-ADRDHASPTW-GDGDTLYVARDADV 213

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-- 289
            D D      +      +   +    +    P  +++G+R   S    E   +   +L  
Sbjct: 214 ADPDDSLATEIRAYDLDSGDSVVRHETTTFQPTLAASGRRVAFSYTDPEQGTMAQTELHL 273

Query: 290 --QSNATERLT----NTLFINISASYSPDSSQIVFESDREGKEQLYVM--------QSNG 335
             +++    LT     TL  ++  ++ P+   + F +  EG   L+ +         S  
Sbjct: 274 LDETDTVHDLTAALDRTLDTDLGPTWDPNGGTLYFGTPDEGATALWRVHAADLATTDSPE 333

Query: 336 SDQKRISQDKEASYFDPVWSPQG-----DLIAFTKFS-GEKFAIGVMKKDGSQERLL 386
           S+ + ++ + E    D   +  G     D +A+ + S      + V   DG   RL 
Sbjct: 334 SEPRPVAVEPERVRRDEWSAIDGFDIGDDRVAYVQSSWDHPGDLFVADADGETTRLT 390


>gi|212636580|ref|YP_002313105.1| transcriptional regulator [Shewanella piezotolerans WP3]
 gi|212558064|gb|ACJ30518.1| Transcriptional regulatory protein [Shewanella piezotolerans WP3]
          Length = 711

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 94/242 (38%), Gaps = 13/242 (5%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRF 265
                +    P  SP+ Q + Y + ++     +YL D    + +PKR+ +  S      +
Sbjct: 176 LSWGGEAERFPAVSPDGQWLVYGSRNNGQSYSLYLKDLSDFNSSPKRLTSNASREARAVW 235

Query: 266 SSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-- 321
           SS+G       + ++     I    + +  T  L+       +   +P+ +++ +     
Sbjct: 236 SSDGTALYFPSTDKRTGDCFIKQFTIATANTVDLSRCNSYMSALDLAPNDTELAYIGFDL 295

Query: 322 REGKEQLYVMQSNGSD--QKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFA-IGVM 376
                 LY +    ++   +R+S   + +Y D    +S  G  +A  +  G     I + 
Sbjct: 296 DTSTGGLYTVNLQETEAPPRRLSCLVDCNYRDRDLAYSTDGKWLAIARRFGNISEDIFIR 355

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +   +E  L E   +++  +W    + L+FS +  G      + ID++ +    +N   
Sbjct: 356 NRATGEELRLTEGLEDIRGLSWHQDNKRLVFSTETSGVRNG--FIIDISTKQSKALNIAG 413

Query: 436 YA 437
           ++
Sbjct: 414 FS 415



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 87/219 (39%), Gaps = 5/219 (2%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S + + +A A     +I     +  R      R+      I    +  + KR + S +
Sbjct: 331 AYSTDGKWLAIAR-RFGNISEDIFIRNRATGEELRLTEGLEDIRGLSWHQDNKRLVFSTE 389

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV-MQSNGS 336
                + + +D+ +  ++ L N    +   S+  +S+ +VFE  ++  + +Y+   +  +
Sbjct: 390 TSGVRNGFIIDISTKQSKAL-NIAGFSY-PSFLANSNALVFERHKKEYQIVYLATDAAVA 447

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAP 395
                      S+ +P +S Q   I +         +     +G   R L   +  +  P
Sbjct: 448 SAPFPMLQSGFSFRNPDYSEQTKRIVYVSNLTGANELWTADINGENRRQLTRLNQRVAYP 507

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            WS  G+++ F        G+ ++ ++L  ++ +++ +P
Sbjct: 508 KWSHDGKNIAFLAPDAKGEGNVIHILNLASQSLSILTSP 546



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 75/211 (35%), Gaps = 13/211 (6%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P F  N   + +  +  E  +     D  +  AP  +         P +S   KR +  
Sbjct: 416 YPSFLANSNALVFERHKKEYQIVYLATDAAVASAPFPMLQSGFSFRNPDYSEQTKRIVYV 475

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSN 334
                A ++++ D+      +LT          +S D   I F + D +G+  +  + + 
Sbjct: 476 SNLTGANELWTADINGENRRQLTRLNQRVAYPKWSHDGKNIAFLAPDAKGEGNVIHILNL 535

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQ 393
            S    I       +    WS     I FT          +     S+ ++ ++ D +++
Sbjct: 536 ASQSLSILTSPYIDHGRLNWSHDDSAI-FTSTDDGLTQFFL-----SEHQVKVISDVDIR 589

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               +  GR L+F+R         L+ ++L+
Sbjct: 590 LAQATNDGR-LLFTRDDKNG----LWEMELD 615



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 65/159 (40%), Gaps = 14/159 (8%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RI++VS    +    N L   D +G N R LT    ++ + P++S + + +A+   D + 
Sbjct: 471 RIVYVSNLTGA----NELWTADINGENRRQLTRLNQRVAY-PKWSHDGKNIAFLAPDAKG 525

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              V  +     ++   + +         +S +   A+ +   D     +       +  
Sbjct: 526 EGNVIHILNLASQSLSILTSPYIDHGRLNWSHD-DSAIFTSTDDGLTQFFL------SEH 578

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++     ++I  + + +  +++F   R+ K  L+ M+ +
Sbjct: 579 QVKVISDVDIRLAQATNDGRLLFT--RDDKNGLWEMELD 615



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 47/137 (34%), Gaps = 7/137 (5%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNG--SDQKRISQDKEASY 349
              RL+         + SPD   +V+ S   G    LY+   +   S  KR++ +     
Sbjct: 172 QVSRLSWGGEAERFPAVSPDGQWLVYGSRNNGQSYSLYLKDLSDFNSSPKRLTSNASREA 231

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGV--MKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
              VWS  G  + F           +       +    L   +S + A   +P+   L +
Sbjct: 232 RA-VWSSDGTALYFPSTDKRTGDCFIKQFTIATANTVDLSRCNSYMSALDLAPNDTELAY 290

Query: 407 SRKKDGDTGSKLYSIDL 423
                  +   LY+++L
Sbjct: 291 IGFDLDTSTGGLYTVNL 307


>gi|91773774|ref|YP_566466.1| hypothetical protein Mbur_1833 [Methanococcoides burtonii DSM 6242]
 gi|91712789|gb|ABE52716.1| protein with TolB-like six-bladed beta-propeller domain
           [Methanococcoides burtonii DSM 6242]
          Length = 528

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 104/279 (37%), Gaps = 30/279 (10%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYL------TPSRDQILFEPRFSPNQQKVAYATY 231
            +   +   G +  +L   + DG+ I  +      + +  QI+  P +S +    AY   
Sbjct: 84  AYPKGNPRLGGVS-ALYAANSDGSGITRIAWGECTSSNGGQIVTTPVWSQSGDYFAYLEL 142

Query: 232 DDEDILRVYLMDTRIDRAPKRIG--------NFR-SMILAPRFSSNGKRALISVQKDEAM 282
            +  + ++      +  +  ++         N R S    P++S    +    V     +
Sbjct: 143 LEGSMHKIKSAQLLVMSSDLKLVEKIDCDPKNVRCSPEWTPKWSPKENKIAAIVS--GKI 200

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +Y +D +++ +  + +         +SPD  +IVF    +    +  +     +  ++ 
Sbjct: 201 TVYDLDEKTDFSFEMPDDTVRVEDMEWSPDGEKIVFL---QNNHDVITLDIENRELNQLY 257

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQE--RLLVEDSNLQA 394
                + +   WSP    + F +  G +      + + VM ++G+     +     + + 
Sbjct: 258 SRDFVAMYGAQWSPDSKKLLFFEKKGSELSGDLSYDVYVMDEEGNNPSKIITFNSGSSKV 317

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             W P    L+  +K+ GD    LYS+ + G    LI+ 
Sbjct: 318 IQWYPDSERLL-VKKRHGDDSYVLYSLSMTGDMNKLIDG 355



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 81/222 (36%), Gaps = 16/222 (7%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R    + P++SP + K+A        +  +          P        M     +S +G
Sbjct: 176 RCSPEWTPKWSPKENKIAAIVSGKITVYDLDEKTDFSFEMPDDTVRVEDME----WSPDG 231

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVF----ESDREG 324
           ++ +         D+ ++D+++    +L +        A +SPDS +++F     S+  G
Sbjct: 232 EKIVF---LQNNHDVITLDIENRELNQLYSRDFVAMYGAQWSPDSKKLLFFEKKGSELSG 288

Query: 325 --KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGS 381
                +YVM   G++  +I      S     W P  + +   K  G+  + +  +   G 
Sbjct: 289 DLSYDVYVMDEEGNNPSKIITFNSGSSKVIQWYPDSERLLVKKRHGDDSYVLYSLSMTGD 348

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +L+  D +L      P+G  L             + + DL
Sbjct: 349 MNKLIDGDHDLDG-MVGPNGYILASVPNPGSRIPPYIETYDL 389



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 77/240 (32%), Gaps = 53/240 (22%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV----------QKDEAMDIYSVDLQSN 292
           D R      R+    S++    +S +G   L  V          +      +Y+ +   +
Sbjct: 47  DIRSLVDTNRLDIGNSLVFDVLWSPDGSNMLTDVFIGAYPKGNPRLGGVSALYAANSDGS 106

Query: 293 ATERL-------TNTLFINISASYSPDSSQIVFESDREGKE------QLYVMQSNGSDQK 339
              R+       +N   I  +  +S       +    EG        QL VM S+    +
Sbjct: 107 GITRIAWGECTSSNGGQIVTTPVWSQSGDYFAYLELLEGSMHKIKSAQLLVMSSDLKLVE 166

Query: 340 RISQDKEA----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +I  D +       + P WSP+ + IA          I V   D         D + + P
Sbjct: 167 KIDCDPKNVRCSPEWTPKWSPKENKIAAIVSG----KITVYDLDEK------TDFSFEMP 216

Query: 396 T---------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD--PQWVG 444
                     WSP G  ++F +         + ++D+  R    + +  + +    QW  
Sbjct: 217 DDTVRVEDMEWSPDGEKIVFLQN-----NHDVITLDIENRELNQLYSRDFVAMYGAQWSP 271


>gi|58040002|ref|YP_191966.1| Tricorn protease-like protein [Gluconobacter oxydans 621H]
 gi|58002416|gb|AAW61310.1| Tricorn protease homolog [Gluconobacter oxydans 621H]
          Length = 1089

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 55/309 (17%), Positives = 112/309 (36%), Gaps = 39/309 (12%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           + +       +  R++ +S+       + +L  +  DG + + LT   D  + E   S +
Sbjct: 201 HDANLIRPMPWRDRLIVISDE----NGRYNLWSLATDGTDAKQLTHFTDYSVLEASISGD 256

Query: 223 ------QQKVAYATYDDED--ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
                    +        +   ++V L    + R+P  +      + A   S  G+ A  
Sbjct: 257 HIVMRKGADLFDFNLASGETTPIKVDLTSDNLPRSPYWLEKPTRFLTASAISPKGETAAF 316

Query: 275 SVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +++       A     V L +    RL         A  +PD   ++  SD  G   L+ 
Sbjct: 317 TMRGHVVVAGASPRRVVVLATPDNVRL-------RLAQITPDGKSVIAFSDVNGDSALWR 369

Query: 331 MQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--- 386
             ++GS + + ISQ           SP G   A T   G    + +       ++L+   
Sbjct: 370 FAADGSGKGEAISQPSPTEPVILSLSPDGKYAAHTDLLG---RLWLTDLSTKADKLVDNA 426

Query: 387 VEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYS-IDLNGRNETLIN------TPAYA 437
            +D      + +WS  G  L F R +  +   ++   +   G+   + +      TP+++
Sbjct: 427 TQDGTNVFDSLSWSSDGHVLAFVRTRGANLRRQIALYVPATGQTNWVTDGRYESYTPSFS 486

Query: 438 SDPQWVGFM 446
            D +W+ F+
Sbjct: 487 PDGKWLWFL 495



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 71/196 (36%), Gaps = 26/196 (13%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL----FINISASYSPD 312
              +  P  S  G+  L     +    ++SV L     +RLT        I+     SPD
Sbjct: 12  PGYLREPSIS--GQTVLF----NAEQSVWSVPLAGGQAQRLTTVPQGANAIDPHPVISPD 65

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +QI F ++ +G  ++YVM  +G   +R++ +  A      W     ++     +   + 
Sbjct: 66  GTQIAFAANFDGPTEIYVMPRSGGTPRRLTFENVARLKIIGWDAHAGILYAAPAATGPYY 125

Query: 373 ---IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI-----------FSRKKDGDTGSKL 418
              +  +    S + +        A   SP GR L              R   G   S+L
Sbjct: 126 TQTVTAIDPKTSAKHVFPLSGVNDA-ALSPDGRWLYAVRFGLATTGDHMRAYRGGALSQL 184

Query: 419 YSIDL-NGRNETLINT 433
           +  DL NG+    I T
Sbjct: 185 WRFDLQNGKEAERIGT 200



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 63/219 (28%), Gaps = 26/219 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMI 260
           Y      + L     SP  +  A+             R  ++    D    R+       
Sbjct: 293 YWLEKPTRFLTASAISPKGETAAFTMRGHVVVAGASPRRVVVLATPDNVRLRLAQIT--- 349

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIV 317
                  +GK  +     +    ++      +      +           S SPD     
Sbjct: 350 ------PDGKSVIAFSDVNGDSALWRFAADGSGKGEAISQPSP-TEPVILSLSPDGKYAA 402

Query: 318 FESDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-- 372
                +   +L++   +    K +   +QD    +    WS  G ++AF +  G      
Sbjct: 403 ---HTDLLGRLWLTDLSTKADKLVDNATQDGTNVFDSLSWSSDGHVLAFVRTRGANLRRQ 459

Query: 373 IGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKK 410
           I +      Q   + +       P++SP G+ L F   +
Sbjct: 460 IALYVPATGQTNWVTDGRYESYTPSFSPDGKWLWFLSDR 498



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 90/278 (32%), Gaps = 40/278 (14%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               + VM R G   R LT      L    +  +   +  A           +       
Sbjct: 77  GPTEIYVMPRSGGTPRRLTFENVARLKIIGWDAHAGILYAAPAATGPYYTQTVTAIDPKT 136

Query: 249 APKRIGNFRSMILAPRFSSNGKRALI-------------SVQKDEAMDIYSVDLQ-SNAT 294
           + K +     +  A   S +G+                 + +      ++  DLQ     
Sbjct: 137 SAKHVFPLSGVNDA-ALSPDGRWLYAVRFGLATTGDHMRAYRGGALSQLWRFDLQNGKEA 195

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           ER+       I      D  +++  SD  G+  L+ + ++G+D K+++   + S  +   
Sbjct: 196 ERIGTHDANLIRPMPWRD--RLIVISDENGRYNLWSLATDGTDAKQLTHFTDYSVLEASI 253

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTW-------------SPS 400
           S  GD I   +   + F   +   + +  ++ L  D+  ++P W             SP 
Sbjct: 254 S--GDHIVM-RKGADLFDFNLASGETTPIKVDLTSDNLPRSPYWLEKPTRFLTASAISPK 310

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           G +  F+ +        +     + R   ++ TP    
Sbjct: 311 GETAAFTMR------GHVVVAGASPRRVVVLATPDNVR 342



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 63/187 (33%), Gaps = 11/187 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G    +  +  R +     D++   +     D  S I F   +  S      L     DG
Sbjct: 320 GHVVVAGASPRRVVVLATPDNVRLRLAQITPDGKSVIAFSDVNGDSA-----LWRFAADG 374

Query: 201 ANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           +     ++            SP+ +  A+   D    L +  + T+ D+         + 
Sbjct: 375 SGKGEAISQPSPTEPVILSLSPDGKYAAHT--DLLGRLWLTDLSTKADKLVDNATQDGTN 432

Query: 260 ILAP-RFSSNGKRALISVQKDEAM--DIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +     +SS+G        +   +   I      +  T  +T+  + + + S+SPD   +
Sbjct: 433 VFDSLSWSSDGHVLAFVRTRGANLRRQIALYVPATGQTNWVTDGRYESYTPSFSPDGKWL 492

Query: 317 VFESDRE 323
            F SDR 
Sbjct: 493 WFLSDRT 499



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 72/254 (28%), Gaps = 67/254 (26%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             L EP  S   Q V +    ++ +  V L   +  R         ++   P  S +G +
Sbjct: 13  GYLREPSIS--GQTVLF--NAEQSVWSVPLAGGQAQRLTTVPQGANAIDPHPVISPDGTQ 68

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTL-------FIN------------ISASY--- 309
              +   D   +IY +        RLT            +                Y   
Sbjct: 69  IAFAANFDGPTEIYVMPRSGGTPRRLTFENVARLKIIGWDAHAGILYAAPAATGPYYTQT 128

Query: 310 ------------------------SPDSSQIVFE------------SDREGK-EQLYVMQ 332
                                   SPD   +               + R G   QL+   
Sbjct: 129 VTAIDPKTSAKHVFPLSGVNDAALSPDGRWLYAVRFGLATTGDHMRAYRGGALSQLWRFD 188

Query: 333 S-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             NG + +RI    +A+   P+  P  D +        ++ +  +  DG+  + L   ++
Sbjct: 189 LQNGKEAERI-GTHDANLIRPM--PWRDRLIVISDENGRYNLWSLATDGTDAKQLTHFTD 245

Query: 392 LQAPTWSPSGRSLI 405
                 S SG  ++
Sbjct: 246 YSVLEASISGDHIV 259



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 110/304 (36%), Gaps = 45/304 (14%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            ++ +    +     D ++ IL+ + +        ++  +D   +       S    + +
Sbjct: 93  RLTFENVARLKIIGWDAHAGILYAAPAATGPYYTQTVTAIDPKTSAKHVFPLSG---VND 149

Query: 217 PRFSPNQQKVAYAT------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
              SP+ + +                Y    + +++  D +  +  +RIG   + ++ P 
Sbjct: 150 AALSPDGRWLYAVRFGLATTGDHMRAYRGGALSQLWRFDLQNGKEAERIGTHDANLIRP- 208

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDRE 323
                 R ++   ++   +++S+       ++LT+    ++  AS S     IV    R+
Sbjct: 209 -MPWRDRLIVISDENGRYNLWSLATDGTDAKQLTHFTDYSVLEASIS--GDHIVM---RK 262

Query: 324 GKEQLYVMQSNGSDQKRISQD--KEASYFDPVW-------------SPQGDLIAFTKFSG 368
           G + L+       +   I  D   +     P W             SP+G+  AFT    
Sbjct: 263 GAD-LFDFNLASGETTPIKVDLTSDNLPRSPYWLEKPTRFLTASAISPKGETAAFTMRG- 320

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               + V      +  +L    N++      +P G+S+I     +GD+    ++ D +G+
Sbjct: 321 ---HVVVAGASPRRVVVLATPDNVRLRLAQITPDGKSVIAFSDVNGDSALWRFAADGSGK 377

Query: 427 NETL 430
            E +
Sbjct: 378 GEAI 381


>gi|220911028|ref|YP_002486337.1| hypothetical protein Achl_0247 [Arthrobacter chlorophenolicus A6]
 gi|219857906|gb|ACL38248.1| conserved hypothetical protein [Arthrobacter chlorophenolicus A6]
          Length = 294

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 91/289 (31%), Gaps = 38/289 (13%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            +  +    ++ + +    G     L  S D +   P ++ +   +           +++
Sbjct: 1   MKRTLQPGQRSEVWIASVTGE-AELLYSSDDVLFEAPNWTLDGAALV-----LNGDGKLW 54

Query: 241 LMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            +D       +  +     +      + +G    +S        IY   L   A  R+T 
Sbjct: 55  TLDVAGGHPVEVPLTGVPDLNNDHVLAPDGTGIFLSANDG---HIYRASLAGGAATRIT- 110

Query: 300 TLFINISASY----SPDSSQIVFESDREGK----EQLYVMQSNGSDQKRISQDKEASYFD 351
               + +  +    SPD  ++ +     G      +L  + SNG     +          
Sbjct: 111 --GEDGTFHFLHGVSPDGRELAYVGIEAGDFTRPGRLMTIASNGGAAASV-DVGPGHCDG 167

Query: 352 PVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGR---S 403
           P +SP G  +         +     +  ++ DG+  E+LL  DS    P  SP GR    
Sbjct: 168 PEYSPDGKWLYLNTESFSTAPGHAQLARVRSDGTGFEQLLTSDSVDWFPHLSPDGRLASY 227

Query: 404 LIFSRKKDGDTGSKLYSIDL--NGRNETLINT-PAYASDP-----QWVG 444
           + F R   G       ++ L   G   T + T P +          W  
Sbjct: 228 IRFPRGTQGHPADLPVAVVLVSTGDWTTPLQTWPLFGGQGTLNVNSWSP 276



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 70/239 (29%), Gaps = 27/239 (11%)

Query: 193 LCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L  +D   G  +         +  +   +P+   +  +  D      +Y        A +
Sbjct: 53  LWTLDVAGGHPVEVPLTGVPDLNNDHVLAPDGTGIFLSANDG----HIYRASLAGGAATR 108

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAM----DIYSVDLQSNATERLTNTLFINISA 307
             G   +       S +G+       +         + ++     A   +          
Sbjct: 109 ITGEDGTFHFLHGVSPDGRELAYVGIEAGDFTRPGRLMTIASNGGAAASVDVGPGHCDGP 168

Query: 308 SYSPDSSQIVFE----SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            YSPD   +       S   G  QL  ++S+G+  +++       +F P  SP G L ++
Sbjct: 169 EYSPDGKWLYLNTESFSTAPGHAQLARVRSDGTGFEQLLTSDSVDWF-PHLSPDGRLASY 227

Query: 364 TKFSGE------KFAIGVMKKDGSQERLLVED-------SNLQAPTWSPSGRSLIFSRK 409
            +F            + V+          ++          L   +WSP    + F   
Sbjct: 228 IRFPRGTQGHPADLPVAVVLVSTGDWTTPLQTWPLFGGQGTLNVNSWSPDSAHIAFVAY 286


>gi|145538919|ref|XP_001455154.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422953|emb|CAK87757.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1165

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/302 (15%), Positives = 98/302 (32%), Gaps = 40/302 (13%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
               L  + RLWDV+ ++Q    +                  +Y       G        
Sbjct: 700 ASGSLDKDIRLWDVRTKQQKNELEGHDGT-------------VYCVSFSIDGTLL----- 741

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                 S    NS+ + D      ++        +    FSPN   +A  ++D      +
Sbjct: 742 -----ASSSADNSIRLWDVKTGQQKFKLDGHTNQVQSVSFSPNGSMLASGSWDQ----SI 792

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L D        ++      I +  FS +G +   S   D ++ ++ ++       ++ +
Sbjct: 793 RLWDVESGEQKLQLEGHDGTIYSVSFSPDGTKLA-SGGSDISIRLWQIN-TGKQILKIRS 850

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S  +S D S +   SD      + +   N + Q+              +SP G+
Sbjct: 851 HSNCVNSVCFSTDGSMLASGSD---DNSICLWDFNENQQRFKLVGHRKEVISVCFSPNGN 907

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            +A          I +      +++ ++    SN+Q+  +SP   +L        D   +
Sbjct: 908 TLASGSNDKS---ICLWDVKTGKQKAVLNGHTSNIQSVCFSPDSNTLA---SGSNDFSVR 961

Query: 418 LY 419
           L+
Sbjct: 962 LW 963



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 105/327 (32%), Gaps = 49/327 (14%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS-------PASWRKIAHTISD------DIY 163
             K       +  RLW +   KQI+  +  S+             +A    D      D  
Sbjct: 823  TKLASGGSDISIRLWQINTGKQILKIRSHSNCVNSVCFSTDGSMLASGSDDNSICLWDFN 882

Query: 164  QSITGEKGDFNSRILFVS------ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            ++    K   + + +          ++ SG    S+C+ D      + +       +   
Sbjct: 883  ENQQRFKLVGHRKEVISVCFSPNGNTLASGSNDKSICLWDVKTGKQKAVLNGHTSNIQSV 942

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+   +A  + D      V L + +     +++    S + +  F S G     S  
Sbjct: 943  CFSPDSNTLASGSND----FSVRLWNAKNGELIQQLNGHTSYVQSVSFCSCGTLLA-SGS 997

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGS 336
            +D ++ +++ +  +              S S+S D   I       G +  +++      
Sbjct: 998  RDHSIRLWNFEKNT------------IYSVSFSYDCLTIA----SGGNDNSIHLWDVKTE 1041

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
              K   Q    +     +S  G  +A          I +      Q+++ +E   S + +
Sbjct: 1042 QLKANLQGHNDAVRSVCFSADGTKLASGSDDKT---ICLWDIKTGQQQVKLEGHCSTVYS 1098

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +S  G  L        D   +L+ +
Sbjct: 1099 VCFSADGTKLASGSD---DKSIRLWDV 1122


>gi|239996198|ref|ZP_04716722.1| putative peptidase [Alteromonas macleodii ATCC 27126]
          Length = 702

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 85/255 (33%), Gaps = 53/255 (20%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             D    R++ ++ +       IG   ++  A   S NGK    +   +    I+   L 
Sbjct: 80  MTDGRQSRLWQVNIKSGEHRPFIGVDENLSQA-TLSPNGKMVAYTKSVNGRAQIHLYYLD 138

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFE------------------------------- 319
           +  + RLTNT       ++S DS  + F                                
Sbjct: 139 TMQSVRLTNTGEAPRQLTWSHDSKTLAFTQFTEEKQKPLFTGMPSKPKGAKWADQGTYID 198

Query: 320 ----------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                       REG +Q++V+   G   ++++  K  S     +S + D I F     E
Sbjct: 199 AVQYRGDGRGYLREGFDQIFVLPVEGGTPRQLTTGKFPSGGTLSFSKENDWIYFATPQRE 258

Query: 370 KF-------AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD---TGSKL 418
            +        I  +  + +    + + +     PT SP G+ L F++  D         L
Sbjct: 259 DYALHPLFSDIYKVNVNTAAVEQVTDIEGPEGRPTLSPDGKYLAFTQLNDRKLSYQNGDL 318

Query: 419 YSIDLNGRNETLINT 433
             ++L   + T + T
Sbjct: 319 VVLELESGDITHLTT 333



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 103/266 (38%), Gaps = 24/266 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +     S   +  + +   D      LT + +       +S + + +A+  + +E    +
Sbjct: 119 MVAYTKSVNGRAQIHLYYLDTMQSVRLTNTGEAPRQL-TWSHDSKTLAFTQFTEEKQKPL 177

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +           +  +  + I A ++  +G+  L    ++    I+ + ++     +LT 
Sbjct: 178 FT-GMPSKPKGAKWADQGTYIDAVQYRGDGRGYL----REGFDQIFVLPVEGGTPRQLTT 232

Query: 300 TLFINIS-ASYSPDSSQIVFES-DREGK------EQLYVMQSNGSDQKRISQDKEASYFD 351
             F +    S+S ++  I F +  RE          +Y +  N +  ++++ D E     
Sbjct: 233 GKFPSGGTLSFSKENDWIYFATPQREDYALHPLFSDIYKVNVNTAAVEQVT-DIEGPEGR 291

Query: 352 PVWSPQGDLIAFTKFSGEKF-----AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSL 404
           P  SP G  +AFT+ +  K       + V++ +      L    D +L    W    R L
Sbjct: 292 PTLSPDGKYLAFTQLNDRKLSYQNGDLVVLELESGDITHLTTSLDRSLGKFEWRKDSRGL 351

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETL 430
           IFS    G+T  KL ++ L G  + +
Sbjct: 352 IFSYLDHGET--KLAAVSLKGDVKPI 375


>gi|166368233|ref|YP_001660506.1| WD repeat-containing protein [Microcystis aeruginosa NIES-843]
 gi|166090606|dbj|BAG05314.1| WD-repeat protein [Microcystis aeruginosa NIES-843]
          Length = 1385

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 94/229 (41%), Gaps = 36/229 (15%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISV 276
           SPN Q +   + D      ++L D + +     +  F+     +    FS +GK  + + 
Sbjct: 700 SPNGQYIVTESKDG----AIHLWDLKGN----LLTEFKGHQEDVETVAFSPDGKYLV-TG 750

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D+   ++  DL+ N  +          + ++SPD   +      +   +L+    NG+
Sbjct: 751 SEDDTARLW--DLKGNLLKEFKGHQGDVETVAFSPDGKYLA-TGSMDDTARLW--DLNGN 805

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE------DS 390
               + +  + +     +SP G  +A          + +    G+   LL E      D 
Sbjct: 806 LIAEL-KGHQNNVVSVNFSPDGKYLATGSKDNT---LRLWDLKGN---LLTEFKGHQKDE 858

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-----GRNETLINTP 434
           ++++  +SP+G+ L    + + DT ++L+ I  N      +N+ ++ +P
Sbjct: 859 DVESVAFSPNGKYLATGSEDENDT-ARLWDIKGNLVKEFKKNKRIVFSP 906



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/261 (18%), Positives = 97/261 (37%), Gaps = 29/261 (11%)

Query: 172  DFNSRILFVSESV--VSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAY 228
            DF++ + F   S    +G       + +  G   I +    ++  +    FSP+ Q +A 
Sbjct: 1111 DFDASVAFSPNSQYLATGSEDGIARLWNLQGKLLIEFKGHRKNLDINTIAFSPDDQYLAT 1170

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + D+       L D + +   +  G+ +  + +  FS +GK    +   D    ++  D
Sbjct: 1171 GSQDN----TARLWDLKGNLLAQFKGHQQG-VSSVAFSPDGKYLA-TGSGDNTARLW--D 1222

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            L+ N   +         S ++SPD   +   S   G     +    G+   +    +E  
Sbjct: 1223 LKGNLLTKFKGHQQGVSSVAFSPDGKYLATGS---GDNTARLWDLKGNLLTKFKGHQEG- 1278

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSL 404
                 +SP G  +A   +        +    G+   +L E       +++  +SP G+ L
Sbjct: 1279 VSSVAFSPDGKYLATGSWDNTA---RLWDLQGN---ILAEFKGHQEGVKSVAFSPDGKYL 1332

Query: 405  IFSRKKDGDTGSKLYSI-DLN 424
                    D  ++L+ I DL+
Sbjct: 1333 ATGSM---DATARLWLIEDLD 1350



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 57/337 (16%), Positives = 124/337 (36%), Gaps = 32/337 (9%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
           + ++ +     ++    Q + K  F +  S      TI   I +     +  F ++I+ +
Sbjct: 640 EGQISLLIEALEIGQELQNVAKSGFKNEYSAPGFLLTIRTIINEIQERNRLVFQAKIITL 699

Query: 181 SESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           S +    V+     ++ + D  G N+        + +    FSP+ + +   + DD    
Sbjct: 700 SPNGQYIVTESKDGAIHLWDLKG-NLLTEFKGHQEDVETVAFSPDGKYLVTGSEDD---- 754

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
              L D + +   +  G  +  +    FS +GK    +   D+   ++  DL  N    L
Sbjct: 755 TARLWDLKGNLLKEFKG-HQGDVETVAFSPDGKYLA-TGSMDDTARLW--DLNGNLIAEL 810

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSP 356
                  +S ++SPD   +   S       L +    G+         K+       +SP
Sbjct: 811 KGHQNNVVSVNFSPDGKYLATGSK---DNTLRLWDLKGNLLTEFKGHQKDEDVESVAFSP 867

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +A T    E     +    G+  +   ++  +    +SP  + L+          +
Sbjct: 868 NGKYLA-TGSEDENDTARLWDIKGNLVKEFKKNKRI---VFSPDSKYLVTRS-----FEA 918

Query: 417 KLYSI------DLNGRNETLINTPAYASDPQWVGFMD 447
           +L+ I      +LNG    +I+  +++ D +++  +D
Sbjct: 919 ELWDIKRNVITELNGHQRGVIDV-SFSPDGKYLATLD 954



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 106/308 (34%), Gaps = 69/308 (22%)

Query: 115 RVIKEGKDRLRVEF------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            V      +  V        RLWD+K     + K+F         +A   S D       
Sbjct: 737 TVAFSPDGKYLVTGSEDDTARLWDLKGN---LLKEFKGHQGDVETVA--FSPD------- 784

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                        + + +G + ++  + D +G N+          +    FSP+ + +A 
Sbjct: 785 ------------GKYLATGSMDDTARLWDLNG-NLIAELKGHQNNVVSVNFSPDGKYLAT 831

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-----ILAPRFSSNGKRALISVQKDEAMD 283
            + D+     + L D + +     +  F+       + +  FS NGK    +  +DE   
Sbjct: 832 GSKDN----TLRLWDLKGN----LLTEFKGHQKDEDVESVAFSPNGKYLA-TGSEDENDT 882

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL---YVMQSNGSDQKR 340
               D++ N  +       I     +SPDS  +V  S       +    + + NG  +  
Sbjct: 883 ARLWDIKGNLVKEFKKNKRI----VFSPDSKYLVTRSFEAELWDIKRNVITELNGHQRGV 938

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTW 397
           I         D  +SP G  +A   + G   A+ +    G+   Q ++  +        +
Sbjct: 939 I---------DVSFSPDGKYLATLDYYG---AVRLWNLKGNLIIQFKVHFDQGKRLE--F 984

Query: 398 SPSGRSLI 405
           SP G+ L+
Sbjct: 985 SPDGQYLM 992



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 67/201 (33%), Gaps = 26/201 (12%)

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--------TNTLFINISASYS 310
             I +  FS NGK      ++     I+  DLQ      L              + S ++S
Sbjct: 1062 HISSVSFSPNGKYLATGPKRSAIAQIW--DLQGKLLVNLGKRDLKFGATVADFDASVAFS 1119

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P+S  +      +G  +L+     G          K        +SP    +A       
Sbjct: 1120 PNSQYLA-TGSEDGIARLW--NLQGKLLIEFKGHRKNLDINTIAFSPDDQYLATGSQDNT 1176

Query: 370  KFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---- 424
                 +    G+           + +  +SP G+ L       GD  ++L+ +  N    
Sbjct: 1177 A---RLWDLKGNLLAQFKGHQQGVSSVAFSPDGKYLA---TGSGDNTARLWDLKGNLLTK 1230

Query: 425  -GRNETLINTPAYASDPQWVG 444
               ++  +++ A++ D +++ 
Sbjct: 1231 FKGHQQGVSSVAFSPDGKYLA 1251



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 93/291 (31%), Gaps = 78/291 (26%)

Query: 186  SGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY---- 240
            +G   N+L + D  G  +  +    +D+ +    FSPN + +A  + D+ D  R++    
Sbjct: 831  TGSKDNTLRLWDLKGNLLTEFKGHQKDEDVESVAFSPNGKYLATGSEDENDTARLWDIKG 890

Query: 241  -----------------------------LMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
                                         L D + +   +  G+ R  ++   FS +GK 
Sbjct: 891  NLVKEFKKNKRIVFSPDSKYLVTRSFEAELWDIKRNVITELNGHQRG-VIDVSFSPDGKY 949

Query: 272  ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ---IVFESDREGKEQL 328
               ++    A+ ++  +L+ N   +            +SPD      I      +  + L
Sbjct: 950  LA-TLDYYGAVRLW--NLKGNLIIQFKVHFDQGKRLEFSPDGQYLMSIASTGVIDKNDTL 1006

Query: 329  YVMQSNGSDQKRISQDKEASYFDPVWSPQ------------GDLIAFTKFSGEKFAIGVM 376
            +V         ++S  K+     P  +               + IAF         I   
Sbjct: 1007 FVWDLPKDLITQLSCLKDNERIQPCIASNVLIDIAKDCYESTESIAFQAIYCSIHHI--- 1063

Query: 377  KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGR 426
                             + ++SP+G+ L       G   S +  I DL G+
Sbjct: 1064 ----------------SSVSFSPNGKYLA-----TGPKRSAIAQIWDLQGK 1093


>gi|260752808|ref|YP_003225701.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Zymomonas mobilis subsp. mobilis NCIMB 11163]
 gi|258552171|gb|ACV75117.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Zymomonas mobilis subsp. mobilis NCIMB 11163]
          Length = 739

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 28/249 (11%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           + P FSP+ Q + Y + +      ++L         +++   +  I    +S +G+    
Sbjct: 188 YNPVFSPDGQSLVYISKN-----SLWLYKRDSQTPLQKLFTIKGHIRDLSWSPDGQSLAF 242

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
              + +   I    + S   E L      ++   +SPDS ++ F    E  + +      
Sbjct: 243 VDDRIDHGFIALYRIISGQLEYLPAAFGNDLFPVFSPDSQKLAFIRAYEPPQSISSPDRE 302

Query: 335 GSDQKRISQDKEASYFDPVW-SPQG------------------DLIAFTKFSGEKFAIGV 375
                 I  D         W +P+G                  + I F         I  
Sbjct: 303 KGWWSLIIADINDLTLTEKWHAPKGQGEAYAGTRHQNLYWTEQNQILFPWEQDGWLHIYS 362

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNG-RNETLIN 432
           +  D  +   L+     +   +        LI+S  +D      L++  L+  + E L +
Sbjct: 363 LNPDNGKVSPLM-QGAFEVEQFIVDKAKNRLIYSANRDNHDHYSLWARSLSSEKTERLGS 421

Query: 433 TPAYASDPQ 441
             + A  P 
Sbjct: 422 QESLAFQPA 430



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 15/159 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRV-------YLMDTRIDRAPKRIGNFRSMILA----PRFS 266
            FSP+  ++AY    D +                        + +    I+A    P FS
Sbjct: 134 TFSPDDSQLAYVRGGDPEFPDAPPPNPTFQPQAPEATIHLIDLTSASDNIIASGYNPVFS 193

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+  +   +   ++ +Y  D Q+   ++L          S+SPD   + F  DR    
Sbjct: 194 PDGQSLVYISKN--SLWLYKRDSQT-PLQKLFTIKGHIRDLSWSPDGQSLAFVDDRIDHG 250

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            + + +      + +      +   PV+SP    +AF +
Sbjct: 251 FIALYRIISGQLEYL-PAAFGNDLFPVFSPDSQKLAFIR 288



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 61/153 (39%), Gaps = 23/153 (15%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-----------ISQDKE---ASYFDPV 353
           ++SPD SQ+ +   R G  +           +            ++   +   AS ++PV
Sbjct: 134 TFSPDDSQLAYV--RGGDPEFPDAPPPNPTFQPQAPEATIHLIDLTSASDNIIASGYNPV 191

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +SP G  + +   +    ++ + K+D      +L     +++  +WSP G+SL F   + 
Sbjct: 192 FSPDGQSLVYISKN----SLWLYKRDSQTPLQKLFTIKGHIRDLSWSPDGQSLAFVDDRI 247

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                 LY I ++G+ E L         P +  
Sbjct: 248 DHGFIALYRI-ISGQLEYLPAAFGNDLFPVFSP 279



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 51/156 (32%), Gaps = 32/156 (20%)

Query: 314 SQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKEASYFDPVWSPQGDLIAFTK 365
            +  F   + G+ QL + + +                +D   + ++  +SP    +A+ +
Sbjct: 87  KEWAFVRYQAGQHQLLLTRPDPQADSLPLDCILAHYKEDDGQALYNLTFSPDDSQLAYVR 146

Query: 366 FSGEKF-----------------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
               +F                  I ++    + + ++    N   P +SP G+SL++  
Sbjct: 147 GGDPEFPDAPPPNPTFQPQAPEATIHLIDLTSASDNIIASGYN---PVFSPDGQSLVYIS 203

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           K        LY  D     + L     +  D  W  
Sbjct: 204 KNS----LWLYKRDSQTPLQKLFTIKGHIRDLSWSP 235


>gi|116626667|ref|YP_828823.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229829|gb|ABJ88538.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 849

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 95/244 (38%), Gaps = 19/244 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                    R  I+   RF P+ + V YA   +   + +Y +      +         ++
Sbjct: 325 QPAFQRLTFRRGIVQSARFGPDGRTVVYAAAWNGQPVELYSVQPGSPESRPLELKSTGLL 384

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYS-----VDLQSNATERLTNTLFINISASYSPDSSQ 315
                S +G+ AL+   + +   +         L   A   L + +     A +SPD +Q
Sbjct: 385 G---VSKSGELALLVACRFQGAFLTVGTLAQAPLNGGAPRELLDEVAY---ADWSPDGTQ 438

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAI 373
           +   +  + +   Y +       +  +    A   +   SP+GD IAF    + G+  ++
Sbjct: 439 MAVSTYAKPRRIEYPV-----GTRLFTAPGSAWPGEVRISPKGDRIAFADHYYYGDDGSV 493

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            V+   G ++ L  + ++LQ   WSP G  + F+  K+G   + +Y++ L G+   +   
Sbjct: 494 AVVNLQGEKKTLSSKFNSLQGIAWSPDGDEVWFTGAKNGGQRA-VYAVTLGGKERLIFRA 552

Query: 434 PAYA 437
           P   
Sbjct: 553 PGAV 556



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 84/258 (32%), Gaps = 27/258 (10%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + R L + ES      + +  +   DG+    +             SP+ + +       
Sbjct: 605 DGRTLAIDESGEGSAGETATYIRKSDGSPAVRIGARWTGHAL----SPDGKSLLSTDDLT 660

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSN 292
            +    +L+  R                   +  + KR + +  ++     +Y  D+   
Sbjct: 661 PNATGFWLVPLRAGAPVHVENGLEFNRGIAAWFPDSKRIVYTANERGHEPRVYVQDV-GG 719

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           A   LT     +   + SPD+++++  S     +   +  ++G + +  S          
Sbjct: 720 AARALT--PEGDQFVALSPDAAEVLVRS----AKGYSIYPASGGNPRPASVLTPQDTVLG 773

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---------WSPSGRS 403
                G    +   + E+  I  +   G   R L ++ +   P           +  G+S
Sbjct: 774 F--ADGGKSVYLVTAQERNRIFRVDLSGG-RRELWKELHPPDPAGMRGVGQIKITADGKS 830

Query: 404 LIFSRKKDGDTGSKLYSI 421
           +  S  +   T S+LY +
Sbjct: 831 IASSVNR---TLSELYLV 845


>gi|290960893|ref|YP_003492075.1| hypothetical protein SCAB_65331 [Streptomyces scabiei 87.22]
 gi|260650419|emb|CBG73535.1| putative WD-40 repeat protein [Streptomyces scabiei 87.22]
          Length = 1263

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 96/289 (33%), Gaps = 44/289 (15%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            +LWD+   + +   +  +   S     HT                        +++ +G 
Sbjct: 775  QLWDLTTGRVLFTLRSTTGVVSSLAFDHT-----------------------GKTLATGT 811

Query: 189  IKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               ++ + +  DG   R    S    +    F+P+ + +A  +YD      V L D    
Sbjct: 812  EDGTVHLWNVADGTR-RTTLTSASSRVESLAFAPDGRTLAAGSYDG----TVRLWDPATG 866

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNT-LFI 303
            RA   +    S +++  FS +G R      +           +        R T      
Sbjct: 867  RARTTLTGHTSPVMSVAFSPDGNRLATGDEAGSFGGGDVGVRLWKVGTNRPRATLHVPGG 926

Query: 304  N-ISASYSPDSSQIVFESD----REGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            +  S +Y PD   I   SD    R+G+ +  + +  +     +    D  A     ++SP
Sbjct: 927  DLRSVAYGPDGDTIATSSDETNVRDGRTRGAVRLWDAATRRPRGTLMDGPAGGGPVLFSP 986

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             G  +A T     +    +      + R       +    +SP GR+L+
Sbjct: 987  DGRTLAVTAGPRGQ----LWDVATRRIRTTFPVRFVNGMAFSPDGRTLV 1031



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 100/337 (29%), Gaps = 49/337 (14%)

Query: 120 GKDRLRVEFRLWDVKDRKQ---IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                    RLWD    +      G     +P   R +A            G  G     
Sbjct: 636 ASGAFDGTVRLWDPATGRTRKVFGGHAGRDTPEFVRTLA-----------FGPDG----- 679

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRY---LTPSRDQILFEPRFSPNQQKVAYATYDD 233
                  V  G  +  L   D D   +R    +    D  +    F  + + +A      
Sbjct: 680 ----RTLVTGGNDEARLW--DPDTGRVRASVAVRHPDDDNMAAVGFDRDGRALAVTESGQ 733

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                  ++D    R    +     + +A  F  +G+    SV ++    ++ +      
Sbjct: 734 -------VLDVADGRVTTTLRGPTGLEMAVAFGPDGRTLATSV-RNRTAQLWDL-TTGRV 784

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              L +T  +  S ++      +      +G   L+ + ++G+ +  ++           
Sbjct: 785 LFTLRSTTGVVSSLAFDHTGKTLA-TGTEDGTVHLWNV-ADGTRRTTLTSASSR-VESLA 841

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIF----S 407
           ++P G  +A   + G    + +      + R  L    S + +  +SP G  L       
Sbjct: 842 FAPDGRTLAAGSYDGT---VRLWDPATGRARTTLTGHTSPVMSVAFSPDGNRLATGDEAG 898

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               GD G +L+ +  N    TL           +  
Sbjct: 899 SFGGGDVGVRLWKVGTNRPRATLHVPGGDLRSVAYGP 935



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/354 (13%), Positives = 90/354 (25%), Gaps = 79/354 (22%)

Query: 122  DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                V  RLW V   +              R +A+    D   + + E            
Sbjct: 901  GGGDVGVRLWKVGTNRP--RATLHVPGGDLRSVAYGPDGDTIATSSDE------------ 946

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             +V  G  + ++ + D      R              FSP+ + +A        +  V  
Sbjct: 947  TNVRDGRTRGAVRLWDAATRRPRGTLMDGPAGGGPVLFSPDGRTLAVTAGPRGQLWDVAT 1006

Query: 242  MDTRIDRAPKRIGNFRSMILAP-----------------------------------RFS 266
               R     + +     M  +P                                    FS
Sbjct: 1007 RRIRTTFPVRFV---NGMAFSPDGRTLVTVGEGLVLWDARTGRPRVELPEAEEGSPVAFS 1063

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----------------YS 310
              G     +        I   D  +             +                   + 
Sbjct: 1064 PTGD-VFATTAGSGDGTIRLRDPATGRVRSTLAEPRGGVPPRTASGGPPLFRQVQAMAFG 1122

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            PD   +   ++ +GK +L+   +   D        +    +  +SP G  +A        
Sbjct: 1123 PDGRTLA-SAESDGKVRLWDTGTGHLDATLTVSLTDGPV-ELAFSPDGRTLATV----GG 1176

Query: 371  FAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             A+ +        R    +      P +SP GR+L+   ++D      L+ +DL
Sbjct: 1177 GAVRLWDTATRYARASFPDGGGTLRPAFSPDGRTLVVGGRRD---RLSLWDVDL 1227



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 67/202 (33%), Gaps = 33/202 (16%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---- 307
           R+    + + A  +S +G+    S   D  + ++  D  +  T ++        +     
Sbjct: 615 RLTGHTATVSALAYSPDGETLA-SGAFDGTVRLW--DPATGRTRKVFGGHAGRDTPEFVR 671

Query: 308 --SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++ PD   +V      G ++  +   +    +             V  P  D +A   
Sbjct: 672 TLAFGPDGRTLV----TGGNDEARLWDPDTGRVR---------ASVAVRHPDDDNMAAVG 718

Query: 366 FSGEKFAIGV----MKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           F  +  A+ V       D +  R+            A  + P GR+L  S +   +  ++
Sbjct: 719 FDRDGRALAVTESGQVLDVADGRVTTTLRGPTGLEMAVAFGPDGRTLATSVR---NRTAQ 775

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           L+ +       TL +T    S 
Sbjct: 776 LWDLTTGRVLFTLRSTTGVVSS 797



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 60/187 (32%), Gaps = 34/187 (18%)

Query: 113  TGRVIKEGKDRLRVEFRLWDVKDRKQ----------IIGKKFFSSPASWRKIAHTISDDI 162
            TG V            RL D    +           +  +     P  +R++        
Sbjct: 1065 TGDVFATTAGSGDGTIRLRDPATGRVRSTLAEPRGGVPPRTASGGPPLFRQVQAMAFGPD 1124

Query: 163  YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
             +++   + D   R+        +G +  +L V   DG                  FSP+
Sbjct: 1125 GRTLASAESDGKVRLW----DTGTGHLDATLTVSLTDGPVEL-------------AFSPD 1167

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             + +A           V L DT   R  +         L P FS +G+  ++  ++D  +
Sbjct: 1168 GRTLATV-----GGGAVRLWDTAT-RYARASFPDGGGTLRPAFSPDGRTLVVGGRRD-RL 1220

Query: 283  DIYSVDL 289
             ++ VDL
Sbjct: 1221 SLWDVDL 1227



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 17/126 (13%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP- 352
             RLT       + +YSPD   +      +G  +L+         +++            
Sbjct: 613 EHRLTGHTATVSALAYSPDGETLA-SGAFDGTVRLW--DPATGRTRKVFGGHAGRDTPEF 669

Query: 353 ----VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-----EDSNLQAPTWSPSGRS 403
                + P G  +     +G      +   D  + R  V     +D N+ A  +   GR+
Sbjct: 670 VRTLAFGPDGRTLV----TGGNDEARLWDPDTGRVRASVAVRHPDDDNMAAVGFDRDGRA 725

Query: 404 LIFSRK 409
           L  +  
Sbjct: 726 LAVTES 731


>gi|289582194|ref|YP_003480660.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
 gi|289531747|gb|ADD06098.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
          Length = 611

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 72/198 (36%), Gaps = 13/198 (6%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                 F  +G      +       ++++       E+ T        AS+SP+  +++F
Sbjct: 14  SAYGASFGPDGDELSFLMDTTGTPQVWTLTGPREWPEQRTFADERVTFASWSPERPELIF 73

Query: 319 ESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIG 374
             D  G E  QL+ + +     + ++   +A +    WS  GD  AFT    ++  F + 
Sbjct: 74  GMDEGGNERAQLFRLDAETGTIENVTAMPDAKHRWGGWSHDGDQFAFTSNRRDEAVFDVY 133

Query: 375 VMKKD--GSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-- 429
           V  +D  G +  L+ E     + + WSP    L+ S+    +    LY +DL     T  
Sbjct: 134 VQDRDETGDEAALVYEGDGWLSLSGWSPDDSRLLVSQAYS-NFDQDLYVLDLEAEKPTLE 192

Query: 430 -LINTPAYAS--DPQWVG 444
            L             W  
Sbjct: 193 HLTPHEGDVRYQSASWAP 210



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 83/269 (30%), Gaps = 73/269 (27%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F P+  ++++   D     +V+ +    +   +R      +  A  +S      +  + 
Sbjct: 19  SFGPDGDELSFL-MDTTGTPQVWTLTGPREWPEQRTFADERVTFA-SWSPERPELIFGMD 76

Query: 278 KDEA--MDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDR--EGKEQLYVMQ 332
           +       ++ +D ++   E +T      +    +S D  Q  F S+R  E    +YV  
Sbjct: 77  EGGNERAQLFRLDAETGTIENVTAMPDAKHRWGGWSHDGDQFAFTSNRRDEAVFDVYVQD 136

Query: 333 SN-GSDQKRISQDKEA-------------------------------------------- 347
            +   D+  +  + +                                             
Sbjct: 137 RDETGDEAALVYEGDGWLSLSGWSPDDSRLLVSQAYSNFDQDLYVLDLEAEKPTLEHLTP 196

Query: 348 -----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSP 399
                 Y    W+P G+ I      G+   + +   D       +E   L++     W+ 
Sbjct: 197 HEGDVRYQSASWAPDGEGIYLVTDHGDTDTLYLAYLD-------LESGALESVVADEWNV 249

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            G +L      D +TG  +YS ++ G  E
Sbjct: 250 DGIAL------DDETGRFVYSQNVEGYTE 272


>gi|115453447|ref|NP_001050324.1| Os03g0403400 [Oryza sativa Japonica Group]
 gi|29788823|gb|AAP03369.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108708691|gb|ABF96486.1| WD40-like Beta Propeller Repeat family protein, expressed [Oryza
           sativa Japonica Group]
 gi|113548795|dbj|BAF12238.1| Os03g0403400 [Oryza sativa Japonica Group]
          Length = 744

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 95/294 (32%), Gaps = 66/294 (22%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-- 274
           P  S +  K+A+   + + +        R+    K   +  S       + +     +  
Sbjct: 403 PTISKDGSKLAFVDNEFKAVWLADSHGLRVVYEKKGPNSVFSTAWNQNTALDTLYVCVGP 462

Query: 275 SVQKDEAMDIYSVD----LQSNATERLTNTLFINISASYSPDSSQIVFESDRE------G 324
           S   D+ + IY++     L      RLT     N   S SPD  ++VF S R+       
Sbjct: 463 SFSADKPLQIYAIHDVSALGGRQQRRLTAGASNNAFPSSSPDGGRLVFRSTRDGGGGGRR 522

Query: 325 KEQLYVM------QSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSG-------- 368
            + LYVM      +   S   R++     +     WSP+   D I F+            
Sbjct: 523 HKNLYVMEDAAVGEFGTSKVTRLTS-GAWTDTHCSWSPREGSDWIVFSSTRDKPAAAPAD 581

Query: 369 ------EKFAIGVMKKD--GSQERLLVE----DSNLQAPTWSPSGRSLIFSRK------- 409
                   FA+ +++        R++        ++  P +SP GRS+  +         
Sbjct: 582 DNGLDPGYFAVFLVRASDPTVVVRVVRSADSVAGHVNHPVFSPDGRSIAVTADLAAVSAD 641

Query: 410 --------KDGDTGSKLYSIDLN----------GRNETLINTPAYASDPQWVGF 445
                           ++++D++               + ++    S P W  F
Sbjct: 642 PISLPLFLHSVRPYGDIFTVDIDPDDISKNRDVRAFHRVTHSRYENSTPAWTTF 695



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 52/136 (38%), Gaps = 16/136 (11%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ------ 327
           ++ ++     +Y  +L++  T RLT     ++S + SP   ++   S  +GK        
Sbjct: 160 VAARRSPWTVVYGTNLRTGETARLTPRGTFDLSPAVSPSGKRVAVAS-WQGKPGLWDGEI 218

Query: 328 ------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 +YVM  +     R +     +   P W    D+I F +  G  + +        
Sbjct: 219 EDLRTDIYVMNVHKPPLGR-TGPVVKNAGWPTWGSD-DVIFFHRRVGTTWGVFRFSMSTG 276

Query: 382 QE-RLLVEDSNLQAPT 396
           +E R+  E+ +   P 
Sbjct: 277 EEARVTPEEFDAVTPA 292



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 12/154 (7%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-----------DEA 281
                 V            R+    +  L+P  S +GKR  ++  +           D  
Sbjct: 163 RRSPWTVVYGTNLRTGETARLTPRGTFDLSPAVSPSGKRVAVASWQGKPGLWDGEIEDLR 222

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIY +++      R    +      ++  D   I F         ++    +  ++ R+
Sbjct: 223 TDIYVMNVHKPPLGRTGPVVKNAGWPTWGSD-DVIFFHRRVGTTWGVFRFSMSTGEEARV 281

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + ++  +      S     +A  +   +   + V
Sbjct: 282 TPEEFDAVTPAAISETKVAVATIRRKSQFSDVRV 315


>gi|319900490|ref|YP_004160218.1| hypothetical protein Bache_0607 [Bacteroides helcogenes P 36-108]
 gi|319415521|gb|ADV42632.1| hypothetical protein Bache_0607 [Bacteroides helcogenes P 36-108]
          Length = 480

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 84/270 (31%), Gaps = 51/270 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP++  +       ++      M+ ++ +        +     P +   G+    S  
Sbjct: 180 AYSPDRMML---HVRGKNGGTALWMNGKLSKVALNQIGPKKNGSYPMWHPAGRYIAFSSN 236

Query: 278 K----------------DEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVF 318
           +                D   D+   D Q+       R   +       ++S D   + +
Sbjct: 237 ETKQSFYSEGEKQIEVYDLQSDLIIYDTQTGKVLSDSRFMESSHWETFPAWSMDGKWLYY 296

Query: 319 ESD---------REGKEQLYVMQSNGSDQ---KRISQ-----DKEASYFDPVWSPQGDLI 361
            S          ++ K  L  +  +G+     +RI           S   P  SP G  +
Sbjct: 297 CSALARQIPAGLKQLKYSLCRVGFDGATGMLGERIDTLYNAERGGGSASYPRISPDGQYL 356

Query: 362 AFTKFSGEKFAIGVMKKDGSQER----------LLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            +TK +   F I   + D    R          +L          WS + R ++FS ++ 
Sbjct: 357 LYTKAAFGTFPIHHQESDLKMLRLMDGTEMDTAILNSGEADSYHAWSSNSRWILFSSRRI 416

Query: 412 GDTGSKLYS--IDLNGRNETLINTPAYASD 439
               ++++   +D  G+       P  + +
Sbjct: 417 DGRYTRIFIAWMDAQGKLHKPFLLPQRSPE 446



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 56/172 (32%), Gaps = 33/172 (19%)

Query: 195 VMDRDGANIRYLTPSR----DQILFEPRFSPNQQKVAYATYDDEDILRVYLM-------- 242
           ++  D    + L+ SR          P +S + + + Y +     I              
Sbjct: 259 LIIYDTQTGKVLSDSRFMESSHWETFPAWSMDGKWLYYCSALARQIPAGLKQLKYSLCRV 318

Query: 243 --DTRIDRAPKRIGN------FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             D       +RI               PR S +G+  L +        I+  +      
Sbjct: 319 GFDGATGMLGERIDTLYNAERGGGSASYPRISPDGQYLLYTKAAFGTFPIHHQESDLKML 378

Query: 295 ERLTNTLFINIS----------ASYSPDSSQIVFESDR-EGKE-QLYVMQSN 334
            RL +   ++ +           ++S +S  I+F S R +G+  ++++   +
Sbjct: 379 -RLMDGTEMDTAILNSGEADSYHAWSSNSRWILFSSRRIDGRYTRIFIAWMD 429


>gi|315046594|ref|XP_003172672.1| hypothetical protein MGYG_05262 [Arthroderma gypseum CBS 118893]
 gi|311343058|gb|EFR02261.1| hypothetical protein MGYG_05262 [Arthroderma gypseum CBS 118893]
          Length = 1321

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 94/280 (33%), Gaps = 32/280 (11%)

Query: 170 KGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G + + + F        S  +  ++ + +     +       D  +    FSP+ + +A
Sbjct: 698 HGHWVTSVAFSPNGQLLASSSLDKTVRLWETATGALYQTLEGHDDGVTSVVFSPDGRLLA 757

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            A+ D      + L D       +        I A  FS +G+  L++     +  ++  
Sbjct: 758 SASRDT----VIRLWDMVTGALQQTFEGHDEWIEAVAFSIDGQ--LLASSCSGSFKLW-- 809

Query: 288 DLQSNATERLTNTLFINISASYSPDSS--QIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           D+ + A ++ T          +SPD     + F         + +  +     +RI +  
Sbjct: 810 DVTTRALKQ-TIKADWYGYPVFSPDGRLLAVAFH-----DNTIRLWDAGTGAPQRILKGH 863

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNLQA--PTW 397
             S     +SP G ++A +   G    I +              R ++ED         +
Sbjct: 864 RDSVNSIKFSPDGQILASSSDDGT---IILWDAATGAPKRSLNARQIIEDDESCFSLVAF 920

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           SP  + L     +  DT   L+   + G  + ++     +
Sbjct: 921 SPDSQLLALCFHR--DTTITLWDT-ITGAVQQVLEGHRDS 957



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 82/229 (35%), Gaps = 23/229 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSPN Q +A ++ D      V L +T      + +      + +  FS
Sbjct: 695 LEGHGHWVTSVAFSPNGQLLASSSLDK----TVRLWETATGALYQTLEGHDDGVTSVVFS 750

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGK 325
            +G+    S  +D  + ++  D+ + A ++        I A ++S D   +   S   G 
Sbjct: 751 PDGRLLA-SASRDTVIRLW--DMVTGALQQTFEGHDEWIEAVAFSIDGQLLA--SSCSGS 805

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            +L+         K+    K   Y  PV+SP G L+A          I +        + 
Sbjct: 806 FKLW--DVTTRALKQ--TIKADWYGYPVFSPDGRLLAVAFHDNT---IRLWDAGTGAPQR 858

Query: 386 LVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +++       +  +SP G+ L  S     D    L+     G  +  +N
Sbjct: 859 ILKGHRDSVNSIKFSPDGQILASSSD---DGTIILWDA-ATGAPKRSLN 903



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 58/318 (18%), Positives = 106/318 (33%), Gaps = 52/318 (16%)

Query: 127  EFRLWDVKDR--KQIIGKKFFSSP---ASWRKIAHTISDDIY----------QSITGEKG 171
             F+LWDV  R  KQ I   ++  P      R +A    D+            Q I     
Sbjct: 805  SFKLWDVTTRALKQTIKADWYGYPVFSPDGRLLAVAFHDNTIRLWDAGTGAPQRILKGHR 864

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGA--------NIRYLTPSRDQILFEPRFSPNQ 223
            D  + I F  +  +     +   ++  D A        N R +    +       FSP+ 
Sbjct: 865  DSVNSIKFSPDGQILASSSDDGTIILWDAATGAPKRSLNARQIIEDDESCFSLVAFSPDS 924

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            Q +A   + D     + L DT      + +   R  I    FS +G+    S   D  + 
Sbjct: 925  QLLALCFHRD---TTITLWDTITGAVQQVLEGHRDSITEVAFSPDGRLLA-SSSDDNTVR 980

Query: 284  IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            ++  D+ + A + L                 +I++ S   G + + +  +  +  +R   
Sbjct: 981  LW--DMATRAQQTLKGHE------------QEIIYSS---GDKAVGLWDT-TTRAQRTLN 1022

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                      +SP G L+A     G+   +          +  +E  +     +S  GR 
Sbjct: 1023 GYGKEVISVTFSPDGQLLASISLDGKTVELW--NVVTGALKQTLEGESYSM-AFSSDGRL 1079

Query: 404  LIFSRKKDGDTGSKLYSI 421
            L     K      +L+++
Sbjct: 1080 LASGSYK----TVRLWNV 1093



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 90/270 (33%), Gaps = 23/270 (8%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            +GD +S I    +      +KN   V   D A ++        ++F PR +  ++   +
Sbjct: 619 IRGDRSSEISEFIQDAKQFTLKNRQMV---DTAPLQL---YNSGLVFAPRTAVTRK--FF 670

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                + + R+  ++       + +      + +  FS NG+    S   D+ + ++   
Sbjct: 671 EMDFPKWLSRLPNVEETWSAHIQALEGHGHWVTSVAFSPNGQLLA-SSSLDKTVRLWE-- 727

Query: 289 LQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             + A  + L        S  +SPD   +   S       + +        ++  +  + 
Sbjct: 728 TATGALYQTLEGHDDGVTSVVFSPDGRLLASASR---DTVIRLWDMVTGALQQTFEGHDE 784

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                 +S  G L+A        F +          +  ++      P +SP GR L  +
Sbjct: 785 WIEAVAFSIDGQLLA--SSCSGSFKLW--DVTTRALKQTIKADWYGYPVFSPDGRLLAVA 840

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                D   +L+     G  + ++     +
Sbjct: 841 FH---DNTIRLWDA-GTGAPQRILKGHRDS 866



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 88/263 (33%), Gaps = 47/263 (17%)

Query: 188  IIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR- 245
                ++ + D   GA  + L   RD I     FSP+ + +A ++ D  + +R++ M TR 
Sbjct: 932  HRDTTITLWDTITGAVQQVLEGHRDSITEV-AFSPDGRLLASSSDD--NTVRLWDMATRA 988

Query: 246  -------------------------IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
                                       RA + +  +   +++  FS +G+    S+  D 
Sbjct: 989  QQTLKGHEQEIIYSSGDKAVGLWDTTTRAQRTLNGYGKEVISVTFSPDGQLLA-SISLDG 1047

Query: 281  AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
                   ++ + A ++       + S ++S D   +   S +     + +        + 
Sbjct: 1048 KTVELW-NVVTGALKQ--TLEGESYSMAFSSDGRLLASGSYKT----VRLWNVATGVLQL 1100

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWS 398
              +           SP G L+A +      F + +           +E  N    +  +S
Sbjct: 1101 AVECHSNLVLSVAISPNGQLLASSSM----FRVKLCDVATGLLLQTIEGHNRDITSMAFS 1156

Query: 399  PSGRSLIFSRKKDGDTGSKLYSI 421
            P  + L        D   KL+ +
Sbjct: 1157 PDNQVLA---SGSKDKTIKLWKV 1176



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 99/317 (31%), Gaps = 39/317 (12%)

Query: 130  LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            LWD       + +       S  ++A   S D  + +     D   R+  ++      + 
Sbjct: 939  LWDTITGA--VQQVLEGHRDSITEVA--FSPD-GRLLASSSDDNTVRLWDMATRAQQTLK 993

Query: 190  KNSLCVMDRDG----------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
             +   ++   G             +       + +    FSP+ Q +A  + D +    V
Sbjct: 994  GHEQEIIYSSGDKAVGLWDTTTRAQRTLNGYGKEVISVTFSPDGQLLASISLDGK---TV 1050

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
             L +       + +        +  FSS+G+       K   +     ++ +   +  + 
Sbjct: 1051 ELWNVVTGALKQTL---EGESYSMAFSSDGRLLASGSYKTVRLW----NVATGVLQLAVE 1103

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                + +S + SP+   +   S      ++ +         +  +          +SP  
Sbjct: 1104 CHSNLVLSVAISPNGQLLASSS----MFRVKLCDVATGLLLQTIEGHNRDITSMAFSPDN 1159

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGS 416
             ++A          I + K      +  + D   +  +  +SP GR L    +   D   
Sbjct: 1160 QVLASGSKDKT---IKLWKVATGVLQQTLSDHRHKVTSVAFSPDGRLLASGSR---DKTL 1213

Query: 417  KLYSIDLNGRNETLINT 433
            +L+     G +  + +T
Sbjct: 1214 RLWDA-ATGASRHIFDT 1229



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 97/311 (31%), Gaps = 52/311 (16%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            GR++    D   V  RLWD+  R Q   +                   IY S     G +
Sbjct: 967  GRLLASSSDDNTV--RLWDMATRAQ---QTLKGHEQEI----------IYSSGDKAVGLW 1011

Query: 174  NSRILFVSESVVSGIIKNSLCV-MDRDGANIRYLTPSRDQILFEP--------------- 217
            ++     ++  ++G  K  + V    DG  +  ++     +                   
Sbjct: 1012 DTTT--RAQRTLNGYGKEVISVTFSPDGQLLASISLDGKTVELWNVVTGALKQTLEGESY 1069

Query: 218  --RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               FS + + +A  +Y       V L +         +    +++L+   S NG+    S
Sbjct: 1070 SMAFSSDGRLLASGSYKT-----VRLWNVATGVLQLAVECHSNLVLSVAISPNGQLLASS 1124

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                    +   D+ +    +       +  S ++SPD+  +   S     + + + +  
Sbjct: 1125 S----MFRVKLCDVATGLLLQTIEGHNRDITSMAFSPDNQVLASGSK---DKTIKLWKVA 1177

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQ 393
                ++   D         +SP G L+A          + +        R + +  +   
Sbjct: 1178 TGVLQQTLSDHRHKVTSVAFSPDGRLLASGSRDKT---LRLWDAATGASRHIFDTKDTAT 1234

Query: 394  APTWSPSGRSL 404
            +  +S  G  L
Sbjct: 1235 SLKFSEDGSYL 1245


>gi|302867847|ref|YP_003836484.1| hypothetical protein Micau_3380 [Micromonospora aurantiaca ATCC
           27029]
 gi|315505751|ref|YP_004084638.1| hypothetical protein ML5_5014 [Micromonospora sp. L5]
 gi|302570706|gb|ADL46908.1| hypothetical protein Micau_3380 [Micromonospora aurantiaca ATCC
           27029]
 gi|315412370|gb|ADU10487.1| hypothetical protein ML5_5014 [Micromonospora sp. L5]
          Length = 320

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 71/198 (35%), Gaps = 16/198 (8%)

Query: 220 SPNQQKVAYATYDDED----ILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALI 274
           SP+ + VA+              V + D    +    + +   +   AP +S +G    +
Sbjct: 77  SPDGRYVAWVNTARSGDGTLEPYVAVYDRVTGQKRTLLADPFGVRYGAPTWSPDGTEIAL 136

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQS 333
            V       + +VD+ + AT  L     +     +S D S IV     R    QL V++ 
Sbjct: 137 -VTGQGNDRLIAVDVVTGATRVLVEGHSM-RDPDWSRDGSMIVVRWRSRSQGWQLRVLEL 194

Query: 334 NGSDQKRISQDKEASYF-DPVWSPQGDLIAFT----KFSGEKFA--IGVMKKDGSQERLL 386
                + I        F  PV+ P    + F         E +   +  ++  G+  + L
Sbjct: 195 ATGTVRPIYTPVAGEMFISPVFMPDSGRVVFCTNRWHLDREVYNQSLASVRIGGTGLKKL 254

Query: 387 VEDSNLQ-APTWSPSGRS 403
            ++     +P +SP GR 
Sbjct: 255 TDEPRFYLSPVFSPDGRY 272



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 46/238 (19%), Positives = 85/238 (35%), Gaps = 24/238 (10%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           + R +    +  SG       V   D   G     L          P +SP+  ++A  T
Sbjct: 79  DGRYVAWVNTARSGDGTLEPYVAVYDRVTGQKRTLLADPFGVRYGAPTWSPDGTEIALVT 138

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDL 289
               D L    + T      + +    SM   P +S +G   ++    + +   +  ++L
Sbjct: 139 GQGNDRLIAVDVVTGA---TRVLVEGHSM-RDPDWSRDGSMIVVRWRSRSQGWQLRVLEL 194

Query: 290 QSNATERLTNTLFINI--SASYSPDSSQIVFESDREG------KEQLYVMQSNGSDQKRI 341
            +     +   +   +  S  + PDS ++VF ++R         + L  ++  G+  K++
Sbjct: 195 ATGTVRPIYTPVAGEMFISPVFMPDSGRVVFCTNRWHLDREVYNQSLASVRIGGTGLKKL 254

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           + D+   Y  PV+SP G   A      E         DG    ++V  S      W P
Sbjct: 255 T-DEPRFYLSPVFSPDGRYCAALSIPPENEY-----PDGGN--IIVSTSGFGEQWWIP 304



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 69/195 (35%), Gaps = 19/195 (9%)

Query: 266 SSNGKRALI---SVQKDEAMDIYS--VDLQSNATERLTNTLF--INISASYSPDSSQIVF 318
           S +G+       +   D  ++ Y    D  +     L    F     + ++SPD ++I  
Sbjct: 77  SPDGRYVAWVNTARSGDGTLEPYVAVYDRVTGQKRTLLADPFGVRYGAPTWSPDGTEIAL 136

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMK 377
            +  +G ++L  +       + + +    S  DP WS  G +I    +   + + + V++
Sbjct: 137 VTG-QGNDRLIAVDVVTGATRVLVEG--HSMRDPDWSRDGSMIVVRWRSRSQGWQLRVLE 193

Query: 378 KDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRN-ET 429
                 R     V      +P + P    ++F   +           L S+ + G   + 
Sbjct: 194 LATGTVRPIYTPVAGEMFISPVFMPDSGRVVFCTNRWHLDREVYNQSLASVRIGGTGLKK 253

Query: 430 LINTPAYASDPQWVG 444
           L + P +   P +  
Sbjct: 254 LTDEPRFYLSPVFSP 268



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 65/218 (29%), Gaps = 29/218 (13%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            +      + G   L     ++D    ++   +   + P   R  A T S D        
Sbjct: 82  YVAWVNTARSGDGTLEPYVAVYDRVTGQK---RTLLADPFGVRYGAPTWSPD-------- 130

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
                + I  V+     G   + L  +D      R L       + +P +S +   +   
Sbjct: 131 ----GTEIALVT-----GQGNDRLIAVDVVTGATRVLVEGHS--MRDPDWSRDGSMIVVR 179

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDE------AM 282
                   ++ +++                M ++P F  +  R +    +          
Sbjct: 180 WRSRSQGWQLRVLELATGTVRPIYTPVAGEMFISPVFMPDSGRVVFCTNRWHLDREVYNQ 239

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            + SV +     ++LT+     +S  +SPD       S
Sbjct: 240 SLASVRIGGTGLKKLTDEPRFYLSPVFSPDGRYCAALS 277


>gi|67923180|ref|ZP_00516668.1| G-protein beta WD-40 repeat [Crocosphaera watsonii WH 8501]
 gi|67854966|gb|EAM50237.1| G-protein beta WD-40 repeat [Crocosphaera watsonii WH 8501]
          Length = 541

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 58/266 (21%), Positives = 102/266 (38%), Gaps = 22/266 (8%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D I      E G          +   SG    ++ + +  G N R L    D +L     
Sbjct: 257 DSIISLEDHEDGVSTVVYSPDGQFFASGSRDETVRLWNNQGENFRTLEGHTDWVLTV-AI 315

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN Q +A  +   +  ++++  D         I      +L   FS +GK  + S  +D
Sbjct: 316 SPNNQLIA--SGGLDRTIKLWRKD---GTLITTITEHERGVLDLAFSPDGKYLV-SSSRD 369

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + + I+ +D   +    +        + + SPD S+IV  S R+   +++       +  
Sbjct: 370 QTIKIWRLD--GSLVRNIEGHQAPVRTIAISPDGSKIVSGS-RDNTVKVWSWD---GELL 423

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWS 398
              Q+ +   +D  +SP G++IA     G    +     DG   + L    S +++  +S
Sbjct: 424 HTLQEHQERVWDVAFSPNGEMIASGSDDGT---VRFWNLDGQLIKTLYSYSSMVRSLAFS 480

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLN 424
           P G+ L       G   S L   DLN
Sbjct: 481 PDGQQLAV-----GSRESMLILWDLN 501



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 87/250 (34%), Gaps = 25/250 (10%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             +V+    ++L + +    +I  L    D +     +SP+ Q   +A+   ++ +R++ 
Sbjct: 238 NRIVTASRDHTLKLWNPQQDSIISLEDHEDGVSTV-VYSPDGQ--FFASGSRDETVRLWN 294

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                    + +      +L    S N +    S   D  + ++  D        +T   
Sbjct: 295 NQ---GENFRTLEGHTDWVLTVAISPNNQLIA-SGGLDRTIKLWRKD--GTLITTITEHE 348

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              +  ++SPD   +V  S R+  + + + + +GS  + I +  +A       SP G  I
Sbjct: 349 RGVLDLAFSPDGKYLV-SSSRD--QTIKIWRLDGSLVRNI-EGHQAPVRTIAISPDGSKI 404

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKK--------DG 412
                      + V   DG     L E    +    +SP+G  +              DG
Sbjct: 405 VSGSRDNT---VKVWSWDGELLHTLQEHQERVWDVAFSPNGEMIASGSDDGTVRFWNLDG 461

Query: 413 DTGSKLYSID 422
                LYS  
Sbjct: 462 QLIKTLYSYS 471



 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 83/210 (39%), Gaps = 27/210 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+Q ++  A+ D    L     D+ I      + +    +    +S +G+    S  
Sbjct: 232 AFSPDQNRIVTASRDHTLKLWNPQQDSIIS-----LEDHEDGVSTVVYSPDGQFFA-SGS 285

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGS 336
           +DE + ++  + Q      L       ++ + SP++  I       G ++ + + + +G+
Sbjct: 286 RDETVRLW--NNQGENFRTLEGHTDWVLTVAISPNNQLIA----SGGLDRTIKLWRKDGT 339

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP- 395
               I+ + E    D  +SP G  +  +        I + + DGS  R +      QAP 
Sbjct: 340 LITTIT-EHERGVLDLAFSPDGKYLVSSSRDQT---IKIWRLDGSLVRNI---EGHQAPV 392

Query: 396 ---TWSPSGRSLIFSRKKDGDTGSKLYSID 422
                SP G  ++   +   D   K++S D
Sbjct: 393 RTIAISPDGSKIVSGSR---DNTVKVWSWD 419



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 69/170 (40%), Gaps = 14/170 (8%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +  I    FS +  R + +  +D  + ++  + Q ++   L +      +  YSPD   
Sbjct: 224 HQGEIRGIAFSPDQNRIV-TASRDHTLKLW--NPQQDSIISLEDHEDGVSTVVYSPDGQF 280

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
               S R+   +L+   + G + + +    +        SP   LIA     G    I +
Sbjct: 281 FASGS-RDETVRLW--NNQGENFRTLEGHTDW-VLTVAISPNNQLIA---SGGLDRTIKL 333

Query: 376 MKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +KDG+    + E +  +    +SP G+ L+ S +   D   K++ +D +
Sbjct: 334 WRKDGTLITTITEHERGVLDLAFSPDGKYLVSSSR---DQTIKIWRLDGS 380


>gi|329955036|ref|ZP_08296017.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           clarus YIT 12056]
 gi|328526326|gb|EGF53341.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           clarus YIT 12056]
          Length = 736

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 49/115 (42%), Gaps = 7/115 (6%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I +   S + K+   SV      +     +++ ++   +  +++T   +     ++  
Sbjct: 52  GRIGSVAVSPDEKQIAYSVAYYSVPENKSNNELFVMNADGSNNKQITRDNWQESQPAWIK 111

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           D  +I F  +  G  Q++ M  +G+++K+++Q  +       +SP G  + F   
Sbjct: 112 DGKKIAFLCNESGSSQVWEMNPDGTERKQLTQY-DGDIEGFAFSPDGKKLLFIAQ 165



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 96/281 (34%), Gaps = 36/281 (12%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV      N L VM+ DG+N + +T    Q   +P +  + +K+A+   +     +V+ 
Sbjct: 73  YSVPENKSNNELFVMNADGSNNKQITRDNWQ-ESQPAWIKDGKKIAFLCNESGSS-QVWE 130

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----KDEAMDIYSVDLQSNATERL 297
           M+       K++  +   I    FS +GK+ L   Q    +  A     +   +     +
Sbjct: 131 MNPD-GTERKQLTQYDGDIEGFAFSPDGKKLLFIAQVKTVQSTADKHPDLPKATGII--V 187

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T+ ++ +    +   +    F ++ +G     V                       WSP 
Sbjct: 188 TDLMYKHWD-EWVTTAPHP-FVAEFDGNGISNVKDILEGLPYESPMKPFGGIEQLAWSPA 245

Query: 358 GDLIAFTKF---------------------SGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            D +AFT                        G    +       S  +  +   +   P 
Sbjct: 246 SDKVAFTCRMKTGLAYAISTDSDIYEYDVQKGGFVNLCKQDAKASDGQTEMAGYDTN-PQ 304

Query: 397 WSPSGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLINTP 434
           +SP G+ + + S ++DG     ++L  +D     +  ++  
Sbjct: 305 YSPDGKYIAWQSMERDGYEADLNRLCVMDRATGEKRFVSQG 345



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 8/107 (7%)

Query: 310 SPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD  QI +        + +   +L+VM ++GS+ K+I++D       P W   G  IAF
Sbjct: 60  SPDEKQIAYSVAYYSVPENKSNNELFVMNADGSNNKQITRD-NWQESQPAWIKDGKKIAF 118

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
                    +  M  DG++ + L + D +++   +SP G+ L+F  +
Sbjct: 119 LCNESGSSQVWEMNPDGTERKQLTQYDGDIEGFAFSPDGKKLLFIAQ 165



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 91/304 (29%), Gaps = 71/304 (23%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------DD 233
           +    + +  M+ DG   + LT     I     FSP+ +K+ +               D 
Sbjct: 121 NESGSSQVWEMNPDGTERKQLTQYDGDIEGF-AFSPDGKKLLFIAQVKTVQSTADKHPDL 179

Query: 234 EDILRVYLMDTRIDRAPKRIGNFR-------------------------------SMILA 262
                + + D       + +                                     I  
Sbjct: 180 PKATGIIVTDLMYKHWDEWVTTAPHPFVAEFDGNGISNVKDILEGLPYESPMKPFGGIEQ 239

Query: 263 PRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERL-----------TNTLFI 303
             +S    +   + +             DIY  D+Q      L           T     
Sbjct: 240 LAWSPASDKVAFTCRMKTGLAYAISTDSDIYEYDVQKGGFVNLCKQDAKASDGQTEMAGY 299

Query: 304 NISASYSPDSSQIVFES-DREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           + +  YSPD   I ++S +R+G      +L VM     +++ +SQ  +++    +W+   
Sbjct: 300 DTNPQYSPDGKYIAWQSMERDGYEADLNRLCVMDRATGEKRFVSQGFQSNVDAFLWNKDS 359

Query: 359 DLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             I F      +  I      D      L       A + +  G S+I +++     G +
Sbjct: 360 RSIFFLGVWQGRTQIYNTGLEDDKHIYQLTNGMYDYA-SMALCGNSMI-AKRHSMSMGDE 417

Query: 418 LYSI 421
           ++SI
Sbjct: 418 IFSI 421



 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 10/59 (16%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 390 SNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQWV 443
             + +   SP  + + +S       +  + ++L+ ++ +G N   I    +  S P W+
Sbjct: 52  GRIGSVAVSPDEKQIAYSVAYYSVPENKSNNELFVMNADGSNNKQITRDNWQESQPAWI 110


>gi|170114191|ref|XP_001888293.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636782|gb|EDR01074.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1388

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 82/234 (35%), Gaps = 22/234 (9%)

Query: 185  VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VSG    ++ V D + G ++         ++    FSP+ + +   + D  D +RV+   
Sbjct: 847  VSGSDDKTVRVWDAQTGQSVMDPLKGHSSLVTSVAFSPDGRHIVSGSND--DTVRVWDAQ 904

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTL 301
            T         G+   ++ +  FS +G+  + S   DE + ++  D Q+  +    L    
Sbjct: 905  TGQSIMDPLKGHDH-IVTSVAFSPDGRHIV-SGSNDETVRVW--DAQTGQSVMDPLKGHD 960

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDL 360
                S ++SPD   IV  S+    E + V  +          +  +       +SP G  
Sbjct: 961  HDVTSVAFSPDGRHIVSGSN---DETVRVWDAQTGQSVMDPLKGHDHDVTSVAFSPDGRH 1017

Query: 361  IAFTKFSGEKFAIGVM----KKDGSQER-----LLVEDSNLQAPTWSPSGRSLI 405
            I                     DG           V   + Q   +SP GR ++
Sbjct: 1018 IVSGSADKTVRVWDAQTVAFSPDGRHIVSGSNDKTVRVWDAQTVAFSPDGRHIV 1071



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 86/237 (36%), Gaps = 28/237 (11%)

Query: 185  VSGIIKNSLCVMDR-------DGANIRYLTPSRDQILFEP---RFSPNQQKVAYATYDDE 234
            VSG    ++ V D        DG +I   +  +   +++     FSP+ + +   +YD  
Sbjct: 1071 VSGSCDKTVRVWDAQTVAFSPDGRHIVSGSYDKTVRVWDAQTVAFSPDGRHIVSGSYD-- 1128

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              +RV+   T         G+    + +  FS +G+  + S   D  + ++  D Q+  +
Sbjct: 1129 KTVRVWDAQTGQSVMDPLKGHDH-HVTSVAFSPDGRHIV-SGSADNTVRVW--DAQTGQS 1184

Query: 295  E--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FD 351
                L        S ++SPD  QIV  S     + + V  +              ++   
Sbjct: 1185 VMDPLKGHDHYVTSVAFSPDGRQIVSGS---ADKTVRVWDAQTGQSVMDPFKGHDNWVTS 1241

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLI 405
              +SP G  I    +      + V      Q     L   D  + +  +SP GR ++
Sbjct: 1242 VAFSPDGRHIVSGSYDKT---VRVWDAQTGQSVMDPLKGHDHYVTSVAFSPDGRHIV 1295



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 81/228 (35%), Gaps = 19/228 (8%)

Query: 185  VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VSG    ++ V D + G ++       D  +    FSP+ + +   + D  + +RV+   
Sbjct: 1123 VSGSYDKTVRVWDAQTGQSVMDPLKGHDHHVTSVAFSPDGRHIVSGSAD--NTVRVWDAQ 1180

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTL 301
            T         G+    + +  FS +G++ + S   D+ + ++  D Q+  +         
Sbjct: 1181 TGQSVMDPLKGHDH-YVTSVAFSPDGRQIV-SGSADKTVRVW--DAQTGQSVMDPFKGHD 1236

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDL 360
                S ++SPD   IV  S     + + V  +          +  +       +SP G  
Sbjct: 1237 NWVTSVAFSPDGRHIVSGSY---DKTVRVWDAQTGQSVMDPLKGHDHYVTSVAFSPDGRH 1293

Query: 361  IAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLI 405
            I           + V      Q     L   D  + +  +S  GR ++
Sbjct: 1294 IVSGSADKT---VRVWDAQTGQSVMDPLKGHDRYVTSVAFSSDGRHIV 1338



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 52/240 (21%), Positives = 85/240 (35%), Gaps = 25/240 (10%)

Query: 185  VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VSG   +++ V D + G +I       D I+    FSP+ + +   + D+   +RV+   
Sbjct: 890  VSGSNDDTVRVWDAQTGQSIMDPLKGHDHIVTSVAFSPDGRHIVSGSNDE--TVRVWDAQ 947

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTL 301
            T         G+    + +  FS +G+  + S   DE + ++  D Q+  +    L    
Sbjct: 948  TGQSVMDPLKGHDH-DVTSVAFSPDGRHIV-SGSNDETVRVW--DAQTGQSVMDPLKGHD 1003

Query: 302  FINISASYSPDSSQIVFES----DREGKEQLYVMQSNGSDQKRISQDKEASYFDP---VW 354
                S ++SPD   IV  S     R    Q      +G      S DK    +D     +
Sbjct: 1004 HDVTSVAFSPDGRHIVSGSADKTVRVWDAQTVAFSPDGRHIVSGSNDKTVRVWDAQTVAF 1063

Query: 355  SPQGDLIAFTKFSGEKFAIGVM----KKDG-----SQERLLVEDSNLQAPTWSPSGRSLI 405
            SP G  I                     DG           V   + Q   +SP GR ++
Sbjct: 1064 SPDGRHIVSGSCDKTVRVWDAQTVAFSPDGRHIVSGSYDKTVRVWDAQTVAFSPDGRHIV 1123



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 61/326 (18%), Positives = 108/326 (33%), Gaps = 56/326 (17%)

Query: 106  LGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS 159
             G   LVT  V      R  V        R+WD +  + I+               H   
Sbjct: 871  KGHSSLVT-SVAFSPDGRHIVSGSNDDTVRVWDAQTGQSIMD----------PLKGH--- 916

Query: 160  DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPR 218
            D I  S+                 +VSG    ++ V D + G ++       D  +    
Sbjct: 917  DHIVTSVAFSPDG---------RHIVSGSNDETVRVWDAQTGQSVMDPLKGHDHDVTSVA 967

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+ + +   + D+   +RV+   T         G+    + +  FS +G+  + S   
Sbjct: 968  FSPDGRHIVSGSNDE--TVRVWDAQTGQSVMDPLKGHDH-DVTSVAFSPDGRHIV-SGSA 1023

Query: 279  DEAMDIY-----SVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESD----REGK 325
            D+ + ++     +           +N   + +    + ++SPD   IV  S     R   
Sbjct: 1024 DKTVRVWDAQTVAFSPDGRHIVSGSNDKTVRVWDAQTVAFSPDGRHIVSGSCDKTVRVWD 1083

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDP---VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             Q      +G      S DK    +D     +SP G  I    +      + V      Q
Sbjct: 1084 AQTVAFSPDGRHIVSGSYDKTVRVWDAQTVAFSPDGRHIVSGSYDKT---VRVWDAQTGQ 1140

Query: 383  ER---LLVEDSNLQAPTWSPSGRSLI 405
                 L   D ++ +  +SP GR ++
Sbjct: 1141 SVMDPLKGHDHHVTSVAFSPDGRHIV 1166



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 54/323 (16%), Positives = 103/323 (31%), Gaps = 63/323 (19%)

Query: 113  TGRVIKEGKDRLRVE------FRLWDVKDRKQII----GKKFFSSP----ASWRKIAHTI 158
               V      R  V        R+WD +  + ++    G     +        R I    
Sbjct: 963  VTSVAFSPDGRHIVSGSNDETVRVWDAQTGQSVMDPLKGHDHDVTSVAFSPDGRHIVSGS 1022

Query: 159  SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-------DGANIRYLTPSRD 211
            +D   +    +   F+         +VSG    ++ V D        DG +I   +  + 
Sbjct: 1023 ADKTVRVWDAQTVAFSPD----GRHIVSGSNDKTVRVWDAQTVAFSPDGRHIVSGSCDKT 1078

Query: 212  QILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              +++     FSP+ + +   +YD    +RV+   T                    FS +
Sbjct: 1079 VRVWDAQTVAFSPDGRHIVSGSYD--KTVRVWDAQT------------------VAFSPD 1118

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKE 326
            G+  + S   D+ + ++  D Q+  +    L        S ++SPD   IV  S      
Sbjct: 1119 GRHIV-SGSYDKTVRVW--DAQTGQSVMDPLKGHDHHVTSVAFSPDGRHIVSGS---ADN 1172

Query: 327  QLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + V  +          +  +       +SP G  I           + V      Q  +
Sbjct: 1173 TVRVWDAQTGQSVMDPLKGHDHYVTSVAFSPDGRQIVSGSADKT---VRVWDAQTGQSVM 1229

Query: 386  ---LVEDSNLQAPTWSPSGRSLI 405
                  D+ + +  +SP GR ++
Sbjct: 1230 DPFKGHDNWVTSVAFSPDGRHIV 1252



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 18/196 (9%)

Query: 219 FSPNQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           F+P   +++      +     +++  M+   ++   R+      + +  FS +G   + S
Sbjct: 790 FAPKNSRISRHFLKLFAKTLTVKMGQMENWSEKCILRLAGHDDYVTSVAFSPDGIHIV-S 848

Query: 276 VQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              D+ + ++  D Q+  +    L     +  S ++SPD   IV  S+    + + V  +
Sbjct: 849 GSDDKTVRVW--DAQTGQSVMDPLKGHSSLVTSVAFSPDGRHIVSGSN---DDTVRVWDA 903

Query: 334 NGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVED 389
                     +  +       +SP G  I           + V      Q     L   D
Sbjct: 904 QTGQSIMDPLKGHDHIVTSVAFSPDGRHIVSGSNDET---VRVWDAQTGQSVMDPLKGHD 960

Query: 390 SNLQAPTWSPSGRSLI 405
            ++ +  +SP GR ++
Sbjct: 961 HDVTSVAFSPDGRHIV 976



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 80/225 (35%), Gaps = 30/225 (13%)

Query: 121  KDRLRVEFRLWDVKDRKQII----GKKFFSSP----ASWRKIAHTISDDIYQSITGEKG- 171
                    R+WD +  + ++    G     +        R I    +D+  +    + G 
Sbjct: 1124 SGSYDKTVRVWDAQTGQSVMDPLKGHDHHVTSVAFSPDGRHIVSGSADNTVRVWDAQTGQ 1183

Query: 172  ----------DFNSRILFVS--ESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPR 218
                       + + + F      +VSG    ++ V D + G ++       D  +    
Sbjct: 1184 SVMDPLKGHDHYVTSVAFSPDGRQIVSGSADKTVRVWDAQTGQSVMDPFKGHDNWVTSVA 1243

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+ + +   +YD    +RV+   T         G+    + +  FS +G+  + S   
Sbjct: 1244 FSPDGRHIVSGSYD--KTVRVWDAQTGQSVMDPLKGHDH-YVTSVAFSPDGRHIV-SGSA 1299

Query: 279  DEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESD 321
            D+ + ++  D Q+  +    L        S ++S D   IV  SD
Sbjct: 1300 DKTVRVW--DAQTGQSVMDPLKGHDRYVTSVAFSSDGRHIVSGSD 1342


>gi|158338566|ref|YP_001519743.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158308807|gb|ABW30424.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1208

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 88/274 (32%), Gaps = 16/274 (5%)

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
             F++  L     V S  + +++C+ D +    +         +      P    +A    
Sbjct: 806  IFSASFLPNRSVVASAGLDSTICITDLETGICQRRLLGHHSCINSVTCHPQGNLLA---- 861

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
               D   + L D    +A +      +  L+ R S +G+  + S   D A+  + V   +
Sbjct: 862  SGGDEPMIRLYDLTTGQALQSWRAQVNSTLSIRHSPDGQTIV-SGSTDGAIRFWQV--AT 918

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               +            ++ P    +         +Q+ +      +  ++     A+   
Sbjct: 919  GTYQTYWQHQGWVYGLAFHPQGHLLA---SAGNDQQIRIWDVATKEVLQVLPGHGATIAS 975

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +SP G  +A   + G  + +        Q    +    +   +W P  + +       
Sbjct: 976  LAFSPDGQWLASGSWDGT-WRLW--DVAKGQMVQAIPGHFVSGLSWGPDSQQIAIGS--- 1029

Query: 412  GDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
             D   ++Y +     ++TL+  P +A    W   
Sbjct: 1030 FDAHVQIYDVPSATLSQTLVGHPFWAWYVAWSPL 1063



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 50/313 (15%), Positives = 105/313 (33%), Gaps = 36/313 (11%)

Query: 113  TGRVIKEGKDRLRVEFRLWDVKDRKQIIG-KKFFSSPASWRKIAH--------------- 156
             G ++  G D   +  RL+D+   + +   +   +S  S R                   
Sbjct: 856  QGNLLASGGDEPMI--RLYDLTTGQALQSWRAQVNSTLSIRHSPDGQTIVSGSTDGAIRF 913

Query: 157  -TISDDIYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
              ++   YQ+    +G +   + F  +     S      + + D     +  + P     
Sbjct: 914  WQVATGTYQTYWQHQG-WVYGLAFHPQGHLLASAGNDQQIRIWDVATKEVLQVLPGHGAT 972

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +    FSP+ Q +A  ++D        L D    +  + I      +    +  + ++  
Sbjct: 973  IASLAFSPDGQWLASGSWDGTWR----LWDVAKGQMVQAIPGH--FVSGLSWGPDSQQIA 1026

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQ 332
            I    D  + IY V   + +   L    F     ++SP  +++       G +Q L +  
Sbjct: 1027 I-GSFDAHVQIYDVPSATLSQT-LVGHPFWAWYVAWSPLGNRMA----TGGADQTLRIWD 1080

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             +  +   +  D         +SP G  +A      E   +  ++      +L    S  
Sbjct: 1081 VDSGECLHVLTDHTDWVMGVAFSPDGQTVASCS-KDETARLWSVETGQCLAKLSGHPSWS 1139

Query: 393  QAPTWSPSGRSLI 405
             A  +SP G++L+
Sbjct: 1140 TAVEFSPDGQTLV 1152



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 89/261 (34%), Gaps = 24/261 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + ++S     +  + D    +    TP  +Q ++E   SP+   +A A++D      V +
Sbjct: 690 QRLISAGEDRTWRIWDLQTGDCLQTTPGHEQGIWEIALSPDGHTLASASHD----ATVKV 745

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    R  + +      +    FS +G+  + S   D  + I+ V       + LT   
Sbjct: 746 WDLETGRCLRTLKGHTDWLRTVAFSDDGQWLV-SGGCDRTLRIWKVS-SGQCVQVLTPHT 803

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               SAS+ P+ S +           + +        +R      +        PQG+L+
Sbjct: 804 QAIFSASFLPNRSVVA---SAGLDSTICITDLETGICQRRLLGHHSCINSVTCHPQGNLL 860

Query: 362 AFTKFSGEKFAIGVMKKDGSQ-----ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           A     G++  I +      Q        +    +++    SP G++++           
Sbjct: 861 A---SGGDEPMIRLYDLTTGQALQSWRAQVNSTLSIRH---SPDGQTIVSGSTDGAIRFW 914

Query: 417 KLYSIDLNGRNETLINTPAYA 437
           ++      G  +T      + 
Sbjct: 915 QV----ATGTYQTYWQHQGWV 931



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 73/208 (35%), Gaps = 15/208 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F P  +++A   + +  +L       +  +A     + ++ + +  FS +G   L S  
Sbjct: 596 AFDPKGKRLATGHFANVIMLWDVQNPKQGSQAIGIFKSHQNNVWSVAFSVDG-SILASAS 654

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGS 336
           +D+ + ++ VD         T       S    PD  +++      G+++ + +      
Sbjct: 655 EDQTIRLWQVD-TGQCLSIFTGHTDCVRSVVMHPDGQRLI----SAGEDRTWRIWDLQTG 709

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--A 394
           D  + +   E   ++   SP G  +A          + V   +  +    ++        
Sbjct: 710 DCLQTTPGHEQGIWEIALSPDGHTLASASHDAT---VKVWDLETGRCLRTLKGHTDWLRT 766

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +S  G+ L+       D   +++ + 
Sbjct: 767 VAFSDDGQWLV---SGGCDRTLRIWKVS 791



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 76/231 (32%), Gaps = 21/231 (9%)

Query: 182 ESVVSGIIKNSLCVMDRD----GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           + + +G   N + + D      G+    +  S    ++   FS +   +A A+ D     
Sbjct: 602 KRLATGHFANVIMLWDVQNPKQGSQAIGIFKSHQNNVWSVAFSVDGSILASASEDQ---- 657

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + L      +           + +     +G+R  IS  +D    I+  DLQ+    + 
Sbjct: 658 TIRLWQVDTGQCLSIFTGHTDCVRSVVMHPDGQRL-ISAGEDRTWRIW--DLQTGDCLQT 714

Query: 298 T--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           T  +   I    + SPD   +   S       + V         R  +          +S
Sbjct: 715 TPGHEQGI-WEIALSPDGHTLASASH---DATVKVWDLETGRCLRTLKGHTDWLRTVAFS 770

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
             G  +  +        I  +   G   ++L      + + ++ P+ RS++
Sbjct: 771 DDGQWLV-SGGCDRTLRIWKVS-SGQCVQVLTPHTQAIFSASFLPN-RSVV 818



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 67/238 (28%), Gaps = 31/238 (13%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   +A    D  D   + +     D            + A  F   GKR          
Sbjct: 554 DLSHLALWQADLRDTALMKVNMAGADLKDTVFATAFPHVAATAFDPKGKRLA-----TGH 608

Query: 282 MDIYSVDLQSNATERLTNTLFI-------NISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                +       ++ +  + I         S ++S D S +   S+    + + + Q +
Sbjct: 609 FANVIMLWDVQNPKQGSQAIGIFKSHQNNVWSVAFSVDGSILASASE---DQTIRLWQVD 665

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNL 392
                 I           V  P G  +  +      + I                 +  +
Sbjct: 666 TGQCLSIFTGHTDCVRSVVMHPDGQRLI-SAGEDRTWRIW--DLQTGDCLQTTPGHEQGI 722

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-------LINTPAYASDPQWV 443
                SP G +L  +     D   K++ ++  GR           + T A++ D QW+
Sbjct: 723 WEIALSPDGHTLASASH---DATVKVWDLE-TGRCLRTLKGHTDWLRTVAFSDDGQWL 776


>gi|170095689|ref|XP_001879065.1| WD-40 repeat-containing protein [Laccaria bicolor S238N-H82]
 gi|164646369|gb|EDR10615.1| WD-40 repeat-containing protein [Laccaria bicolor S238N-H82]
          Length = 1588

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 89/193 (46%), Gaps = 19/193 (9%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              S +  ++ +   D    L+++  D +  +  + +    + + +  FS NG + + S  
Sbjct: 927  ALSGDGNQIVFGCEDRSGALQIW--DAKTGQQLRNLQGHTAAVTSVAFSPNGNQIV-SGS 983

Query: 278  KDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D ++ ++  D +S    ++L N     +SA +SPD  +IV  S R+   +++ +++   
Sbjct: 984  WDTSVRVW--DAKSGYQLKKL-NHPDWVLSAVFSPDGHKIVSGS-RDELVRIWEIKTG-- 1037

Query: 337  DQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNL 392
              +R+ + K  + +     +SP G+ I         +++ V   +   + ++ +     +
Sbjct: 1038 --RRLLKLKGHTEWVRSVAFSPNGNAIVSGSRD---YSVRVWNAETGHQDMMFQGHMGQV 1092

Query: 393  QAPTWSPSGRSLI 405
            ++ T+SP GR ++
Sbjct: 1093 KSVTFSPDGRKIV 1105



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 77/215 (35%), Gaps = 15/215 (6%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            L + D                +    FSPN  ++   ++D      V + D +     K+
Sbjct: 946  LQIWDAKTGQQLRNLQGHTAAVTSVAFSPNGNQIVSGSWDT----SVRVWDAKSGYQLKK 1001

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            + N    +L+  FS +G + + S  +DE + I+ +        +L        S ++SP+
Sbjct: 1002 L-NHPDWVLSAVFSPDGHKIV-SGSRDELVRIWEI-KTGRRLLKLKGHTEWVRSVAFSPN 1058

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             + IV  S       + V  +    Q  + Q          +SP G  I    +      
Sbjct: 1059 GNAIVSGSR---DYSVRVWNAETGHQDMMFQGHMGQVKSVTFSPDGRKIVSGAWDN---C 1112

Query: 373  IGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLI 405
            I +      Q+   L      + +  +SP+G+ ++
Sbjct: 1113 IKIWDAKTGQQLKDLQGHTGPINSVAFSPNGKQIL 1147



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/364 (14%), Positives = 109/364 (29%), Gaps = 81/364 (22%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      R  V        ++WD K  +Q+   +  + P             I      
Sbjct: 1094 SVTFSPDGRKIVSGAWDNCIKIWDAKTGQQLKDLQGHTGP-------------INSVAFS 1140

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              G          + ++SG   NS+CV D    +           +    FS +   +  
Sbjct: 1141 PNG----------KQILSGAGDNSVCVWDVKTGDQLAELQGHAGPVQSVAFSHDGNSIVS 1190

Query: 229  ATYD----------------DEDILRV--------------------YLMDTRIDRAPKR 252
             +YD                      V                     + D    +  +R
Sbjct: 1191 GSYDCSVWVWDIKFSSSQRLQGHTSPVRSVIFLSDDQILSGFENGLMKVWDANTGKELRR 1250

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            + +    +L+  FSS G++ +          +Y  D +++   +      I  S ++SPD
Sbjct: 1251 LQDTNFGVLSVAFSSVGQKIV---SGLFNGSVYVRDAKTDQLRKFQGHTGIVTSVAFSPD 1307

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             + I   S     + + + ++N   Q R             +SP G+ +           
Sbjct: 1308 GNLIASGSK---DQSVRIWKANEGHQLRNMPGNNGGVLSVAFSPDGNFVVSGCIDT---R 1361

Query: 373  IGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDG------DTGSKLYSIDLNG 425
            + +   +  Q R +   S+ +    +S  G+ ++   +         +TG  L+S+  + 
Sbjct: 1362 VQIWNVNTGQLRNIQGHSDSVHTVAFSHDGKFIVSGSEDKSVRVWEAETGHLLWSMQGHT 1421

Query: 426  RNET 429
                
Sbjct: 1422 DTVR 1425



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 61/388 (15%), Positives = 116/388 (29%), Gaps = 77/388 (19%)

Query: 110  VLVTGRVIKEGK----DRLRVEFRLWDVKDRKQIIGKKFF--SSPASWRKIAHTIS---- 159
             + +      G            R+WD K   Q+           A +    H I     
Sbjct: 966  AVTSVAFSPNGNQIVSGSWDTSVRVWDAKSGYQLKKLNHPDWVLSAVFSPDGHKIVSGSR 1025

Query: 160  DDIYQ--------SITGEKG--DFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLT 207
            D++ +         +   KG  ++   + F     ++VSG    S+ V + +  +   + 
Sbjct: 1026 DELVRIWEIKTGRRLLKLKGHTEWVRSVAFSPNGNAIVSGSRDYSVRVWNAETGHQDMMF 1085

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                  +    FSP+ +K+    +D+     + + D +  +  K +      I +  FS 
Sbjct: 1086 QGHMGQVKSVTFSPDGRKIVSGAWDN----CIKIWDAKTGQQLKDLQGHTGPINSVAFSP 1141

Query: 268  NGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIV--------- 317
            NGK+    +       +   D+++      L        S ++S D + IV         
Sbjct: 1142 NGKQI---LSGAGDNSVCVWDVKTGDQLAELQGHAGPVQSVAFSHDGNSIVSGSYDCSVW 1198

Query: 318  -----FESDR---------------------EG--KEQLYVMQSNGSDQKRISQDKEASY 349
                 F S +                      G     + V  +N   + R  QD     
Sbjct: 1199 VWDIKFSSSQRLQGHTSPVRSVIFLSDDQILSGFENGLMKVWDANTGKELRRLQDTNFGV 1258

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
                +S  G  I    F+G    + V      Q R        + +  +SP G  +    
Sbjct: 1259 LSVAFSSVGQKIVSGLFNGS---VYVRDAKTDQLRKFQGHTGIVTSVAFSPDGNLIA--- 1312

Query: 409  KKDGDTGSKLYSIDLNGRNETLINTPAY 436
                D   +++  +       L N P  
Sbjct: 1313 SGSKDQSVRIWKAN---EGHQLRNMPGN 1337



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 64/392 (16%), Positives = 126/392 (32%), Gaps = 59/392 (15%)

Query: 71   KDLQ-RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLV-----TGRVIKEG---- 120
            KDLQ  +   N ++     ++I +         W+      L       G V        
Sbjct: 1125 KDLQGHTGPINSVAFSPNGKQILSGAGDNSVCVWDVKTGDQLAELQGHAGPVQSVAFSHD 1184

Query: 121  -----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI-----------YQ 164
                          +WD+K       ++     +  R +     D I           + 
Sbjct: 1185 GNSIVSGSYDCSVWVWDIKFSS---SQRLQGHTSPVRSVIFLSDDQILSGFENGLMKVWD 1241

Query: 165  SITGEK---------GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
            + TG++         G  +     V + +VSG+   S+ V D    +          I+ 
Sbjct: 1242 ANTGKELRRLQDTNFGVLSVAFSSVGQKIVSGLFNGSVYVRDAK-TDQLRKFQGHTGIVT 1300

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               FSP+   +A  + D      V +         + +      +L+  FS +G   ++S
Sbjct: 1301 SVAFSPDGNLIASGSKDQ----SVRIWKANEGHQLRNMPGNNGGVLSVAFSPDGNF-VVS 1355

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               D  + I+  ++ +     +        + ++S D   IV  S+    + + V ++  
Sbjct: 1356 GCIDTRVQIW--NVNTGQLRNIQGHSDSVHTVAFSHDGKFIVSGSE---DKSVRVWEAET 1410

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLV-EDSNLQ 393
                   Q    +     +SP  +LI           + +     G Q R L    + + 
Sbjct: 1411 GHLLWSMQGHTDTVRSVAFSPDSNLIVSGSKDKT---VRIWDAKTGHQLRKLQGHSAVVF 1467

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLY--SIDL 423
            A  +S  G+ +I   +   D   +L+   IDL
Sbjct: 1468 AVAFSSDGKQIISGSQ---DFSVRLWDAVIDL 1496


>gi|158340170|ref|YP_001521340.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158310411|gb|ABW32026.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1292

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 53/297 (17%), Positives = 114/297 (38%), Gaps = 34/297 (11%)

Query: 129 RLWDVKDRKQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           RL  +   K +    +        +R +   +SD  +  ++  +               +
Sbjct: 590 RLLSLTRGKSLEEMGYVGGNIVNLFRHLQVDLSDHNFSHLSVWQ---------------A 634

Query: 187 GIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +   +L  ++  G+++ + +       +    FSP+ Q +A    + +    + L D+ 
Sbjct: 635 DMRGINLYGVNFTGSDLSKSVFSQTLGSVHSIAFSPDDQMIAAGDVNGK----IRLFDSE 690

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  + I    S + +  FS  G     S   D+ + I+ V+ +    + LT    +  
Sbjct: 691 NGQHLRTITGHTSWVQSIVFSPTGNLIA-SGSPDQTIMIWDVE-KGENLKLLTGHTNVVY 748

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++SPD  Q+V  SD +G  +L+   S      +I            +SP G  +A   
Sbjct: 749 SINFSPDGQQLVSGSD-DGTVRLW--NSQSGQCHKI-FKYSHGARSTAFSPDGQNLA-IG 803

Query: 366 FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           ++     I  +K  G   +     +  + + T+SP G++L  +     D   KL+++
Sbjct: 804 YADGTIRIWDIK-SGLCLKAWSGHEGWVWSITYSPDGQALASASD---DETIKLWNV 856



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 87/240 (36%), Gaps = 16/240 (6%)

Query: 186 SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           +G +   + + D  +G ++R +T      +    FSP    +A  + D      + + D 
Sbjct: 677 AGDVNGKIRLFDSENGQHLRTIT-GHTSWVQSIVFSPTGNLIASGSPDQ----TIMIWDV 731

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 K +    +++ +  FS +G++ + S   D  + ++  + QS    ++       
Sbjct: 732 EKGENLKLLTGHTNVVYSINFSPDGQQLV-SGSDDGTVRLW--NSQSGQCHKIFKYSHGA 788

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPD   +      +G   + +         +     E   +   +SP G  +A  
Sbjct: 789 RSTAFSPDGQNLA-IGYADGT--IRIWDIKSGLCLKAWSGHEGWVWSITYSPDGQALASA 845

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                     V+    +   L+   + L+   +SPSG  LI       D   K++ I   
Sbjct: 846 SDDETIKLWNVINGACTS-TLVGHSNALRCIVFSPSGDYLI---SGGADHLIKIWDIRTT 901



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 96/272 (35%), Gaps = 26/272 (9%)

Query: 158 ISDDIYQSITGEKG--DFNSRILFVSESV--VSGIIKNSLCVMDRD-GANIRYLTPSRDQ 212
              +  Q +    G   +   I+F        SG    ++ + D + G N++ L      
Sbjct: 687 FDSENGQHLRTITGHTSWVQSIVFSPTGNLIASGSPDQTIMIWDVEKGENLK-LLTGHTN 745

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +++   FSP+ Q++   + D      V L +++  +  K          +  FS +G+  
Sbjct: 746 VVYSINFSPDGQQLVSGSDDG----TVRLWNSQSGQCHKIFKYSHG-ARSTAFSPDGQNL 800

Query: 273 LISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            I    D  + I+  D++S    +  +       S +YSPD   +   SD    E + + 
Sbjct: 801 AI-GYADGTIRIW--DIKSGLCLKAWSGHEGWVWSITYSPDGQALASASD---DETIKLW 854

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                           +    V+SP GD +      G    I +     +Q    +    
Sbjct: 855 NVINGACTSTLVGHSNALRCIVFSPSGDYLI---SGGADHLIKIWDIRTTQCLKTLFGHT 911

Query: 392 LQAPTWSPSG--RSLIFSRKKDGDTGSKLYSI 421
               + + +   R++  S  +DG    K++ I
Sbjct: 912 NWVWSVAINSTQRTIA-SGSEDGS--IKIWDI 940



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 88/261 (33%), Gaps = 35/261 (13%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            +VI  G        RLWDV+  +                  H +S         +KG ++
Sbjct: 1021 QVIASGSSTNDKTIRLWDVQTGQ----------------CKHILS-------GHDKGIWS 1057

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                   + + S     ++ + D             +  ++   FSP ++ +A  ++D  
Sbjct: 1058 LAFHPKGKILASCGSDQTVKLWDTQKGVCLTTFQGHNHWIWSVAFSPKEEILATGSFD-- 1115

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA- 293
                + L + + ++    +    S + +  F  NG   L S   D    ++  DL +N  
Sbjct: 1116 --CSIKLWNIQSEKCLNTLNGHSSCVSSVAFCPNGT-ILASGSFDHTAILW--DLNTNQY 1170

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              +L           +SPD   +   +  +   +L+ +  +     RI +    + F   
Sbjct: 1171 IHKLEGHSHPIWDMDFSPDGQLLA-TASVDHTVRLWKV--DTGQCLRILEGHTNAIFSAS 1227

Query: 354  WSPQGDLIAFTKFSGEKFAIG 374
            +S  G L+  T    E   I 
Sbjct: 1228 FSFDGQLLV-TSSQDETIKIW 1247



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 46/104 (44%), Gaps = 5/104 (4%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG   ++  + D +     +        +++  FSP+ Q +A A+ D      V L    
Sbjct: 1153 SGSFDHTAILWDLNTNQYIHKLEGHSHPIWDMDFSPDGQLLATASVDH----TVRLWKVD 1208

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
              +  + +    + I +  FS +G + L++  +DE + I++V +
Sbjct: 1209 TGQCLRILEGHTNAIFSASFSFDG-QLLVTSSQDETIKIWNVSM 1251



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 17/152 (11%)

Query: 291 SNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEAS 348
                 L   L +++S  ++S      V+++D  G   LY +   GSD  K +      S
Sbjct: 607 GGNIVNLFRHLQVDLSDHNFS---HLSVWQADMRGIN-LYGVNFTGSDLSKSVFSQTLGS 662

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIF 406
                +SP   +IA    +G    I +   +  Q    +    S +Q+  +SP+G  +  
Sbjct: 663 VHSIAFSPDDQMIAAGDVNG---KIRLFDSENGQHLRTITGHTSWVQSIVFSPTGNLIA- 718

Query: 407 SRKKDGDTGSKLYSIDLN-GRNETLINTPAYA 437
                G     +   D+  G N  L+      
Sbjct: 719 ----SGSPDQTIMIWDVEKGENLKLLTGHTNV 746


>gi|300773709|ref|ZP_07083578.1| fibronectin, type III domain protein [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300759880|gb|EFK56707.1| fibronectin, type III domain protein [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 498

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 84/438 (19%), Positives = 149/438 (34%), Gaps = 67/438 (15%)

Query: 54  KFVSIDELGGKVSEVVSKDLQR-----SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGA 108
            +    EL G V+E+   +L       S VF +    S     T P  I    +  ++  
Sbjct: 78  DYAIKAELNGYVTEIKGANLTNADQSVSLVFEMKDDKSLNSPPTVPQLISPADN--AINL 135

Query: 109 QVLVTGRVIKEGKDRLRVEFRLW-------DVKDRKQIIGKKF------FSSPASWRKIA 155
            + V         D   + +RL        D++D K I  K +      + +   W+ +A
Sbjct: 136 PLSVKLTWNCTDPDEDSLSYRLIIKNNKSGDIRDIKNIKDKSYQLENLEYGTSYFWQVVA 195

Query: 156 HTISDDIYQSITGEKGDFNS------RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
              SD I+  +        +      R  +V +S  +        ++  D  N  +   S
Sbjct: 196 ---SDSIHAEVFSPSYKLTTSETPQNRFHYVRKSGDN------YLIVSSDENNQSFNLTS 246

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR----IGNFRSMILAPRF 265
                   R S     +A+    D +   ++          +     I  F    L   +
Sbjct: 247 NQTNSLRVRKSNVAGVLAFIRVTDGNA-HIFTTKADGSALSRVTTIPIAGFNITELDFAW 305

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVF-ESDR 322
           S+NGK  +          +Y V+   + TE +  T          +S D S+I    +D 
Sbjct: 306 SANGKEIVY----PNFDKLYRVNKDGSGTEMIYRTPDGSFISECDWSNDGSKIALKTNDI 361

Query: 323 EG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---------KFA 372
           +G K ++YV+   G+ Q  I ++ + +     +S  GD I +T              K  
Sbjct: 362 DGYKTKIYVIDILGNVQHSILENVKGAAGGINFSVSGDKILYTHDISGYESQDYRQLKSH 421

Query: 373 IGVMKK------DGSQERLLVEDSNLQAPTWSPSGRSLIFS-RKKDGDTGSKLYSIDLNG 425
           I +         D S    +    N     +SP+   +IF+    DG +   +Y I +  
Sbjct: 422 IFLYNLVDNTKTDLSAFTKIPAGYNDLDARFSPNEAEVIFTQTSNDGISQKDIYKIAITN 481

Query: 426 RNET-LINTPAYASDPQW 442
                L+ T A+   P W
Sbjct: 482 ETSRKLLFTNAW--MPDW 497


>gi|302653487|ref|XP_003018569.1| Pfs, NACHT and WD domain protein [Trichophyton verrucosum HKI 0517]
 gi|291182223|gb|EFE37924.1| Pfs, NACHT and WD domain protein [Trichophyton verrucosum HKI 0517]
          Length = 1538

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 53/325 (16%), Positives = 102/325 (31%), Gaps = 64/325 (19%)

Query: 149  ASWRKIAHTISDDIYQ--------SITGEKG--DFNSRILFVSESV--VSGIIKNSLCVM 196
            +  R +A   SD   +         IT  KG  D+ + I F   SV   SG    ++ + 
Sbjct: 795  SGLRHLASASSDRTIRIWDVDDGRCITILKGHSDWVNSISFKQNSVYLASGSSDKTVRIW 854

Query: 197  DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
            D   ++   +       +    FS N + +A A+ D      + + D+   +  + + + 
Sbjct: 855  DVATSSCVKVLQGHTNWINSVAFSHNGKYLASASNDA----SIKIWDSD-GKCEQTLRSH 909

Query: 257  RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               + A  FS + +R  IS   D  + ++ + +       ++       S ++S D   I
Sbjct: 910  SWTVTALAFSPDDQRL-ISGSSDRTIKVWDMSIIGKNMRVISAHDKWVDSLTFSRDGKYI 968

Query: 317  V---------------------------------FESD-----REGKEQLYVMQSNGSDQ 338
                                              F SD         +   +      + 
Sbjct: 969  ASISDDWTLMIWSATTGEYMHTLGSHKDMLNGLCFSSDTHLASASSDQTARIWDIITGEC 1028

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PT 396
            K   +  E       +SP G L+  +        + V + D      L E          
Sbjct: 1029 KETLEGHEDCVNSVDFSPDGSLLVSSS---GDHTVRVWEVDTGMCIQLFEGHTDSVGTAV 1085

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSI 421
            +S  GR +  S +   D   +++S 
Sbjct: 1086 FSTDGRYIASSSR---DKSVRIWST 1107



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 90/251 (35%), Gaps = 35/251 (13%)

Query: 182  ESVVSGIIKNSLCVMDRD--GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            + ++SG    ++ V D    G N+R ++   D+ +    FS + + +A  + D      +
Sbjct: 923  QRLISGSSDRTIKVWDMSIIGKNMRVISA-HDKWVDSLTFSRDGKYIASISDD----WTL 977

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLT 298
             +           +G+ + M+    FSS+    L S   D+   I+  D+ +    E L 
Sbjct: 978  MIWSATTGEYMHTLGSHKDMLNGLCFSSD--THLASASSDQTARIW--DIITGECKETLE 1033

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   S  +SPD S +V  S   G   + V + +     ++ +    S    V+S  G
Sbjct: 1034 GHEDCVNSVDFSPDGSLLVSSS---GDHTVRVWEVDTGMCIQLFEGHTDSVGTAVFSTDG 1090

Query: 359  DLIAFTKFSGEKFA--------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              IA +                I V+            D  + +  +S   + +  +   
Sbjct: 1091 RYIASSSRDKSVRIWSTAEVECIWVLNG---------HDGWVNSAVFSDDSQFVASTST- 1140

Query: 411  DGDTGSKLYSI 421
              D   +++ +
Sbjct: 1141 --DKTVRIWHV 1149


>gi|148508342|gb|ABQ76125.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [uncultured
           haloarchaeon]
          Length = 627

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 100/244 (40%), Gaps = 8/244 (3%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             +N L V+D +    +  +         +  ++  +   V Y  +D +   +  +    
Sbjct: 42  TGRNELHVLDIESGERKQWSDGEVPRNARWFVKWGADGDWV-YFHFDKDGNEQNDVYRIS 100

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + +      ++    S +G+  ++   +D  M++Y   L+S+ TE++T+      
Sbjct: 101 PRGEVETVIEMDGQVVLNDVSEDGQTLIVGSTRDGQMNLYRHHLESSQTEKITSYNRATA 160

Query: 306 SASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLI 361
           +A  SP+  ++ +     D      +YV  ++GS+ + +   +  +   PV W P    +
Sbjct: 161 NAILSPECDRLAYSTNERDNFNNRDVYVAAADGSNPRNLDIGEIGAESTPVDWGPDNQQL 220

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYS 420
             T  + E   IGV      + + L +D   ++   ++P G  +I  R ++  +   +Y 
Sbjct: 221 LITDNTAEFDRIGVYDLKTHELKWLGDDQREESAVAFTPDGNRVIGIRVREAVSVPVVYD 280

Query: 421 IDLN 424
           I+ N
Sbjct: 281 IESN 284



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 65/193 (33%), Gaps = 12/193 (6%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQIVF 318
            P  S +G +  +        +++ +D++S   ++ ++            +  D   + F
Sbjct: 25  HPTVSPDGNKIAMYYDITGRNELHVLDIESGERKQWSDGEVPRNARWFVKWGADGDWVYF 84

Query: 319 ESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             D++G EQ  +Y +   G  +  I  D +    D   S  G  +        +  +   
Sbjct: 85  HFDKDGNEQNDVYRISPRGEVETVIEMDGQVVLND--VSEDGQTLIVGSTRDGQMNLYRH 142

Query: 377 KKDGSQERLLVEDSNLQAPTW-SPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETLINTP 434
             + SQ   +   +   A    SP    L +S   +D      +Y    +G N   ++  
Sbjct: 143 HLESSQTEKITSYNRATANAILSPECDRLAYSTNERDNFNNRDVYVAAADGSNPRNLDIG 202

Query: 435 --AYASDPQ-WVG 444
                S P  W  
Sbjct: 203 EIGAESTPVDWGP 215



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 79/219 (36%), Gaps = 11/219 (5%)

Query: 212 QILFEPRFSPNQQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             L  P  SP+  K+A Y      + L V  +++   +        R+     ++ ++G 
Sbjct: 21  PTLAHPTVSPDGNKIAMYYDITGRNELHVLDIESGERKQWSDGEVPRNARWFVKWGADGD 80

Query: 271 RALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                  KD     D+Y +  +      +       +    S D   ++  S R+G+  L
Sbjct: 81  WVYFHFDKDGNEQNDVYRISPRGEVETVI-EMDGQVVLNDVSEDGQTLIVGSTRDGQMNL 139

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL 385
           Y      S  ++I+    A+    + SP+ D +A++    + F    + V   DGS  R 
Sbjct: 140 YRHHLESSQTEKITSYNRATANA-ILSPECDRLAYSTNERDNFNNRDVYVAAADGSNPRN 198

Query: 386 L--VEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSI 421
           L   E      P  W P  + L+ +          +Y +
Sbjct: 199 LDIGEIGAESTPVDWGPDNQQLLITDNTAEFDRIGVYDL 237



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 34/94 (36%), Gaps = 4/94 (4%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAPTWSPSGRS 403
           +   P  SP G+ IA       +  + V+  +  + +   +     +      W   G  
Sbjct: 22  TLAHPTVSPDGNKIAMYYDITGRNELHVLDIESGERKQWSDGEVPRNARWFVKWGADGDW 81

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           + F   KDG+  + +Y I   G  ET+I      
Sbjct: 82  VYFHFDKDGNEQNDVYRISPRGEVETVIEMDGQV 115



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 63/195 (32%), Gaps = 19/195 (9%)

Query: 115 RVIKEGKDRLRVEF----RLWDVK--DRKQIIGKKFFSSPASWRKIAHTISDDI-----Y 163
           R+   G+    +E      L DV    +  I+G         +R   H  S        Y
Sbjct: 98  RISPRGEVETVIEMDGQVVLNDVSEDGQTLIVGSTRDGQMNLYRH--HLESSQTEKITSY 155

Query: 164 QSITGEKG--DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFS 220
              T          R+ + +           + V   DG+N R L          P  + 
Sbjct: 156 NRATANAILSPECDRLAYSTNER-DNFNNRDVYVAAADGSNPRNLDIGEIGAESTPVDWG 214

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ Q++       E   R+ + D +     K +G+ +    A  F+ +G R +    ++ 
Sbjct: 215 PDNQQLLITDNTAE-FDRIGVYDLKTHEL-KWLGDDQREESAVAFTPDGNRVIGIRVREA 272

Query: 281 AMDIYSVDLQSNATE 295
                  D++SN   
Sbjct: 273 VSVPVVYDIESNEAT 287



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 55/140 (39%), Gaps = 3/140 (2%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR---IGNFRSMILAPRFSSNGKRALISV 276
           SP   ++AY+T + ++     +     D +  R   IG   +      +  + ++ LI+ 
Sbjct: 165 SPECDRLAYSTNERDNFNNRDVYVAAADGSNPRNLDIGEIGAESTPVDWGPDNQQLLITD 224

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              E   I   DL+++  + L +      + +++PD ++++    RE      V     +
Sbjct: 225 NTAEFDRIGVYDLKTHELKWLGDDQREESAVAFTPDGNRVIGIRVREAVSVPVVYDIESN 284

Query: 337 DQKRISQDKEASYFDPVWSP 356
           +       +  + F    SP
Sbjct: 285 EATEFDLPEGVARFGYGGSP 304


>gi|166363202|ref|YP_001655475.1| hypothetical protein MAE_04610 [Microcystis aeruginosa NIES-843]
 gi|166085575|dbj|BAG00283.1| hypothetical protein MAE_04610 [Microcystis aeruginosa NIES-843]
          Length = 170

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 4/125 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           N+   +   SYS D   + F SDR G+  +Y+          +      ++S   P  + 
Sbjct: 42  NSFAPDQFPSYSADGRYLAFASDRSGRRSIYLFDLQEKRLVNLPNLNRGDSSQDQPSLNA 101

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G LIA+      K  + V  +  S+  LL  +   +++ PT S  GR + F   +DG  
Sbjct: 102 DGRLIAYISSERGKSDVMVYDRSQSRATLLTANLRGSVRNPTISGDGRQIAFETNQDGQW 161

Query: 415 GSKLY 419
              + 
Sbjct: 162 NIAIV 166



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 3/118 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFE 319
           P +S++G+    +  +     IY  DLQ      L N           S + D   I + 
Sbjct: 50  PSYSADGRYLAFASDRSGRRSIYLFDLQEKRLVNLPNLNRGDSSQDQPSLNADGRLIAYI 109

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           S   GK  + V   + S    ++ +   S  +P  S  G  IAF      ++ I ++ 
Sbjct: 110 SSERGKSDVMVYDRSQSRATLLTANLRGSVRNPTISGDGRQIAFETNQDGQWNIAIVN 167



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 52/127 (40%), Gaps = 12/127 (9%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA------PRFS 266
               P +S + + +A+A+ D      +YL D       KR+ N  ++         P  +
Sbjct: 46  PDQFPSYSADGRYLAFAS-DRSGRRSIYLFDL----QEKRLVNLPNLNRGDSSQDQPSLN 100

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGK 325
           ++G+       +    D+   D   +    LT N      + + S D  QI FE++++G+
Sbjct: 101 ADGRLIAYISSERGKSDVMVYDRSQSRATLLTANLRGSVRNPTISGDGRQIAFETNQDGQ 160

Query: 326 EQLYVMQ 332
             + ++ 
Sbjct: 161 WNIAIVN 167



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 1/84 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               D    +P  + + + +AY + +      V + D    RA     N R  +  P  S
Sbjct: 87  LNRGDSSQDQPSLNADGRLIAYISSERGKS-DVMVYDRSQSRATLLTANLRGSVRNPTIS 145

Query: 267 SNGKRALISVQKDEAMDIYSVDLQ 290
            +G++      +D   +I  V+ Q
Sbjct: 146 GDGRQIAFETNQDGQWNIAIVNGQ 169



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 8/104 (7%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSP 399
           +  A    P +S  G  +AF      + +I +      +   L      DS+   P+ + 
Sbjct: 42  NSFAPDQFPSYSADGRYLAFASDRSGRRSIYLFDLQEKRLVNLPNLNRGDSSQDQPSLNA 101

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYASDPQ 441
            GR + +   + G   S +   D +    TL+         +P 
Sbjct: 102 DGRLIAYISSERGK--SDVMVYDRSQSRATLLTANLRGSVRNPT 143


>gi|170107037|ref|XP_001884729.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164640291|gb|EDR04557.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1379

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 81/241 (33%), Gaps = 19/241 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V+SG   N +C+ +                +     SP+ + VA  ++D+     + + D
Sbjct: 975  VISGSSDNIVCIWNVATRKAVMELYGHLNYVRAVACSPDGKLVASGSHDN----TIRIWD 1030

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLF 302
                     +    + +    FSS+G    +S   D  + I+  DL +     RL+    
Sbjct: 1031 AETGTLNAVLTGHSAAVTGLAFSSDGG-LFVSASDDGTLCIW--DLATRQPKRRLSGHQS 1087

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S +YS D   I+  S       + +            +          +SP G L+ 
Sbjct: 1088 SVNSVAYSSDGLYIISGSS---DSTICIWSVETGKPTLKLKGNSGWVNTVAFSPDGKLVV 1144

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
            +         I +      +    +E  +    +  +SP+G+ L+       D   +++ 
Sbjct: 1145 YAS---GSKEISICDAKTGEHMAELEGHSEAVTSINFSPNGKYLV---SGSSDKTIRIWD 1198

Query: 421  I 421
            +
Sbjct: 1199 M 1199



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 89/223 (39%), Gaps = 12/223 (5%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG   N++ + D +   +  +       +    FS +     + +  D+  L ++  D
Sbjct: 1017 VASGSHDNTIRIWDAETGTLNAVLTGHSAAVTGLAFSSDGG--LFVSASDDGTLCIW--D 1072

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLF 302
                +  +R+   +S + +  +SS+G    IS   D  + I+SV  ++     +L     
Sbjct: 1073 LATRQPKRRLSGHQSSVNSVAYSSDGLYI-ISGSSDSTICIWSV--ETGKPTLKLKGNSG 1129

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               + ++SPD   +V+ S   G +++ +  +   +     +    +     +SP G  + 
Sbjct: 1130 WVNTVAFSPDGKLVVYAS---GSKEISICDAKTGEHMAELEGHSEAVTSINFSPNGKYLV 1186

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +  S +   I  M    ++  L    + + +  +SP G  ++
Sbjct: 1187 -SGSSDKTIRIWDMLACETKMELKGHLNWVASVAFSPDGSHIV 1228



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 85/238 (35%), Gaps = 16/238 (6%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E   F+S   +V    VSG   +++ V +                +    FSP+   +  
Sbjct: 754 ESVAFSSNGKYV----VSGSHDHTVRVWNSVTGYPEANLKGHSSWVVSVAFSPDGNHIVS 809

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D+     + + +         +    + + +  +SS+G+R + S   D  + ++  +
Sbjct: 810 GSSDN----SIRIWNATTWETEAELKGHSNGVNSVAYSSDGRRIV-SASDDSTVCLW--N 862

Query: 289 LQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             +   E  L        SA +SP+ + +   S   G + + +  S   +   I +    
Sbjct: 863 ALTGELEATLRGHASWVASAVFSPNGAHVTSTS---GDKTVRIWNSLPEESDIILKGHST 919

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 +S  G  I  +     K  I  +     + +L+   S++    +SP G  +I
Sbjct: 920 YIRSVAFSLNGTYIV-SGSDDCKIYIWNIASSSPEAQLIGHSSSVITVAFSPDGTHVI 976



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 75/267 (28%), Gaps = 52/267 (19%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V S     ++ + +        +       +    FS N   +   + D +    +Y+ +
Sbjct: 891  VTSTSGDKTVRIWNSLPEESDIILKGHSTYIRSVAFSLNGTYIVSGSDDCK----IYIWN 946

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGK--------------------------------- 270
                    ++    S ++   FS +G                                  
Sbjct: 947  IASSSPEAQLIGHSSSVITVAFSPDGTHVISGSSDNIVCIWNVATRKAVMELYGHLNYVR 1006

Query: 271  --------RALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESD 321
                    + + S   D  + I+  D ++      LT         ++S D    V  SD
Sbjct: 1007 AVACSPDGKLVASGSHDNTIRIW--DAETGTLNAVLTGHSAAVTGLAFSSDGGLFVSASD 1064

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                  L +        KR     ++S     +S  G  I  +  S     I  ++    
Sbjct: 1065 ---DGTLCIWDLATRQPKRRLSGHQSSVNSVAYSSDGLYII-SGSSDSTICIWSVETGKP 1120

Query: 382  QERLLVEDSNLQAPTWSPSGRSLIFSR 408
              +L      +    +SP G+ ++++ 
Sbjct: 1121 TLKLKGNSGWVNTVAFSPDGKLVVYAS 1147



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 61/205 (29%), Gaps = 20/205 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +    +SP+ + +     D+     + L +         +    S + +  F
Sbjct: 619 ILTGHSAPVVSVAYSPDGKHIVSGARDN----IIRLWNAVTGEPEAELTGHSSWVTSVAF 674

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREG 324
           S +G              I S + ++     +L        S S+SPD    V      G
Sbjct: 675 SPDGAHIA---SASGDRTICSWNPETGEFESQLKVHPTFVRSVSFSPDGRHGV-----SG 726

Query: 325 KEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS- 381
             +  + +  +  ++ +   +          +S  G  +           + V       
Sbjct: 727 LNENSICIWNTVTAESEVELKGHSNWVESVAFSSNGKYVVSGSHD---HTVRVWNSVTGY 783

Query: 382 -QERLLVEDSNLQAPTWSPSGRSLI 405
            +  L    S + +  +SP G  ++
Sbjct: 784 PEANLKGHSSWVVSVAFSPDGNHIV 808



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 61/179 (34%), Gaps = 8/179 (4%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y +        +       D     +    + +++  +S +GK  + S  +D  + ++  
Sbjct: 595 YESERPSPWKLILGQRHTWDACEAILTGHSAPVVSVAYSPDGKHIV-SGARDNIIRLW-- 651

Query: 288 DLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +  +   E  LT       S ++SPD + I   S   G   +        + +   +   
Sbjct: 652 NAVTGEPEAELTGHSSWVTSVAFSPDGAHIASAS---GDRTICSWNPETGEFESQLKVHP 708

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  +SP G     +  +     I       S+  L    + +++  +S +G+ ++
Sbjct: 709 TFVRSVSFSPDGRHGV-SGLNENSICIWNTVTAESEVELKGHSNWVESVAFSSNGKYVV 766



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 87/261 (33%), Gaps = 15/261 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG   N + + +                +    FSP+   +A A+ D      +   + 
Sbjct: 640 VSGARDNIIRLWNAVTGEPEAELTGHSSWVTSVAFSPDGAHIASASGDR----TICSWNP 695

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                  ++    + + +  FS +G+  +  + ++      +V  +S     L       
Sbjct: 696 ETGEFESQLKVHPTFVRSVSFSPDGRHGVSGLNENSICIWNTVTAES--EVELKGHSNWV 753

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++S +   +V  S       + V  S     +   +   +      +SP G+ I  +
Sbjct: 754 ESVAFSSNGKYVVSGSH---DHTVRVWNSVTGYPEANLKGHSSWVVSVAFSPDGNHIV-S 809

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             S     I       ++  L    + + +  +S  GR ++ +     D+   L++  L 
Sbjct: 810 GSSDNSIRIWNATTWETEAELKGHSNGVNSVAYSSDGRRIVSASD---DSTVCLWNA-LT 865

Query: 425 GR-NETLINTPAYASDPQWVG 444
           G    TL    ++ +   +  
Sbjct: 866 GELEATLRGHASWVASAVFSP 886



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 64/193 (33%), Gaps = 13/193 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG   +++C+   +              +    FSP+ + V YA+   E    + + D +
Sbjct: 1103 SGSSDSTICIWSVETGKPTLKLKGNSGWVNTVAFSPDGKLVVYASGSKE----ISICDAK 1158

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                   +      + +  FS NGK  + S   D+ + I+ +       E L   L    
Sbjct: 1159 TGEHMAELEGHSEAVTSINFSPNGKYLV-SGSSDKTIRIWDMLACETKME-LKGHLNWVA 1216

Query: 306  SASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            S ++SPD S IV      G     + V        +   +D     +   + P G  +  
Sbjct: 1217 SVAFSPDGSHIV-----SGCHDHTVRVWDIMTGLCEAEFKDHSGQVYAAAYFPDGQHVIS 1271

Query: 364  TKFSGEKFAIGVM 376
                       +M
Sbjct: 1272 GSDDRMVRKWNIM 1284



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 45/138 (32%), Gaps = 6/138 (4%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VV       + + D              + +    FSPN + +   + D      + + D
Sbjct: 1143 VVYASGSKEISICDAKTGEHMAELEGHSEAVTSINFSPNGKYLVSGSSDK----TIRIWD 1198

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                     +    + + +  FS +G   + S   D  + ++ + +         +    
Sbjct: 1199 MLACETKMELKGHLNWVASVAFSPDGSHIV-SGCHDHTVRVWDI-MTGLCEAEFKDHSGQ 1256

Query: 304  NISASYSPDSSQIVFESD 321
              +A+Y PD   ++  SD
Sbjct: 1257 VYAAAYFPDGQHVISGSD 1274



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 34/103 (33%), Gaps = 5/103 (4%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VSG    ++ + D      +         +    FSP+   +    +D      V + D 
Sbjct: 1186 VSGSSDKTIRIWDMLACETKMELKGHLNWVASVAFSPDGSHIVSGCHDH----TVRVWDI 1241

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                      +    + A  +  +G+  +IS   D  +  +++
Sbjct: 1242 MTGLCEAEFKDHSGQVYAAAYFPDGQH-VISGSDDRMVRKWNI 1283


>gi|281410809|gb|ADA68817.1| HET-R [Podospora anserina]
          Length = 378

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 98/310 (31%), Gaps = 33/310 (10%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQII------GKKFFSS-PASWRKIAHTISDDIYQSITGE 169
            +     +    ++WD    + +       G  +  +  A  +++A    DD  +     
Sbjct: 60  QRLASGAVDDTVKIWDPASGQCLQTLEGHNGSVYSVAFSADGQRLASGAGDDTVKIWDPA 119

Query: 170 KG----------DFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            G             S + F +  + + SG +  ++ + D                +   
Sbjct: 120 SGQCLQTLEGHRGSVSSVAFSADGQRLASGAVDRTVKIWDPASGQCLQTLEGHTGSVSSV 179

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + Q+ A    DD     V + D    +  + + +    + +  FS +G+R   S  
Sbjct: 180 AFSLDGQRFASGAGDD----TVKIWDPASGQCLQTLESHNGSVSSVAFSPDGQRLA-SGA 234

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + I+         + L     +  S ++S D  ++       G + + +       
Sbjct: 235 DDDTVKIWD-PASGQCLQTLEGHKGLVYSVTFSADGQRLA---SGAGDDTVKIWDPASGQ 290

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAP 395
             +  +    S     +SP G   A          + +      Q    +E    ++ + 
Sbjct: 291 CLQTLEGHRGSVHSVAFSPDGQRFASGAVDDT---VKIWDPASGQCLQTLEGHNGSVSSV 347

Query: 396 TWSPSGRSLI 405
            +S  G+ L 
Sbjct: 348 AFSADGQRLA 357



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 78/227 (34%), Gaps = 16/227 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG    ++ + D             +  ++   FSP+ Q++A    DD     V +
Sbjct: 18  QRLASGAGDRTVKIWDPASGQCFQTLEGHNGSVYSVAFSPDGQRLASGAVDD----TVKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +  + +      + +  FS++G+R   S   D+ + I+         + L    
Sbjct: 74  WDPASGQCLQTLEGHNGSVYSVAFSADGQRLA-SGAGDDTVKIWD-PASGQCLQTLEGHR 131

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               S ++S D  ++   + DR     + +         +  +    S     +S  G  
Sbjct: 132 GSVSSVAFSADGQRLASGAVDRT----VKIWDPASGQCLQTLEGHTGSVSSVAFSLDGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLI 405
            A          + +      Q  + L   + ++ +  +SP G+ L 
Sbjct: 188 FA---SGAGDDTVKIWDPASGQCLQTLESHNGSVSSVAFSPDGQRLA 231



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 77/240 (32%), Gaps = 17/240 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  ++   FS + Q++A    D      V + D    +  + +      + +  FS
Sbjct: 1   LEGHNGSVYSVAFSADGQRLASGAGDR----TVKIWDPASGQCFQTLEGHNGSVYSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+R   S   D+ + I+         + L        S ++S D  ++       G +
Sbjct: 57  PDGQRLA-SGAVDDTVKIWD-PASGQCLQTLEGHNGSVYSVAFSADGQRLA---SGAGDD 111

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +         +  +    S     +S  G  +A +        I        Q    
Sbjct: 112 TVKIWDPASGQCLQTLEGHRGSVSSVAFSADGQRLA-SGAVDRTVKIW--DPASGQCLQT 168

Query: 387 VE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +E    ++ +  +S  G+   F+    GD   K++        +TL +     S   +  
Sbjct: 169 LEGHTGSVSSVAFSLDGQR--FASG-AGDDTVKIWDPASGQCLQTLESHNGSVSSVAFSP 225


>gi|169866186|ref|XP_001839683.1| HNWD3 [Coprinopsis cinerea okayama7#130]
 gi|116499236|gb|EAU82131.1| HNWD3 [Coprinopsis cinerea okayama7#130]
          Length = 1364

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 55/333 (16%), Positives = 107/333 (32%), Gaps = 45/333 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIG---------KKFFSSPASWRKIAHTISDDIYQSIT 167
             +          R+WD    K ++               SP   R IA    D+  +   
Sbjct: 1023 SRIASGSGDETIRIWDAHSGKALLEPIQGHTDPVTSVAFSPDGSR-IASGSGDETIRIWD 1081

Query: 168  GEKG-----------DFNSRILFVSE--SVVSGIIKNSLCVMDR-DGANIRYLTPSRDQI 213
               G           D+ + + F  +   + SG    ++ + D   G  +          
Sbjct: 1082 AHSGKALLEPMQGHTDWVTSVAFSPDGSRIASGSGDETIRIWDAHSGKALLEPMQRHTDP 1141

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +    FSP+  ++A  + D  + +R++   +         G+    + +  FS +G R  
Sbjct: 1142 VTSVAFSPDGSRIASGSGD--NTIRIWDAHSGKALLEPMQGHTHP-VKSVAFSPDGSRIA 1198

Query: 274  ISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             S   DE + I+  D  S     E +        S ++SPD S+I   SD    + + + 
Sbjct: 1199 -SGSGDETIRIW--DAHSGKALLEPMQGHTDPVTSVAFSPDGSRIASGSD---DKTIRIW 1252

Query: 332  QSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             ++             ++     +SP G  IA          I +      +  L     
Sbjct: 1253 DAHSGKALLEPMQGHTNWVTSVAFSPDGSRIA---SGSGDETIRIWDAHSGKALLEPMQG 1309

Query: 391  NLQ---APTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +     +  +SP G  +       GD   +++ 
Sbjct: 1310 HTDWVTSVAFSPDGSRIA---SGSGDNTIRIWD 1339



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 85/246 (34%), Gaps = 22/246 (8%)

Query: 182  ESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             SV +G +  ++ V + D G  +          +    FSP+   +A  +  D+  +R++
Sbjct: 937  RSVAAGCVYGAVVVFNADTGEPLLPPMQGHTSYITSVAFSPDGSCIA--SGLDDKTIRIW 994

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLT 298
               +         G+   +  +  FS +G R   S   DE + I+  D  S     E + 
Sbjct: 995  DAHSGKALLEPMQGHTHRIT-SVAFSPDGSRIA-SGSGDETIRIW--DAHSGKALLEPIQ 1050

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQ 357
                   S ++SPD S+I   S   G E + +  ++              +     +SP 
Sbjct: 1051 GHTDPVTSVAFSPDGSRIASGS---GDETIRIWDAHSGKALLEPMQGHTDWVTSVAFSPD 1107

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDT 414
            G  IA          I +      +  L     +     +  +SP G  +       GD 
Sbjct: 1108 GSRIA---SGSGDETIRIWDAHSGKALLEPMQRHTDPVTSVAFSPDGSRIA---SGSGDN 1161

Query: 415  GSKLYS 420
              +++ 
Sbjct: 1162 TIRIWD 1167



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 90/292 (30%), Gaps = 39/292 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIG---------KKFFSSPASWR----------KIAHT 157
             +          R+WD    K ++               SP   R          +I   
Sbjct: 1066 SRIASGSGDETIRIWDAHSGKALLEPMQGHTDWVTSVAFSPDGSRIASGSGDETIRIWDA 1125

Query: 158  ISDDIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDR-DGANIRYLTPSRDQIL 214
             S            D  + + F  +   + SG   N++ + D   G  +          +
Sbjct: 1126 HSGKALLEPMQRHTDPVTSVAFSPDGSRIASGSGDNTIRIWDAHSGKALLEPMQGHTHPV 1185

Query: 215  FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRAL 273
                FSP+  ++A  + D+     + + D    +A  + +      + +  FS +G R  
Sbjct: 1186 KSVAFSPDGSRIASGSGDE----TIRIWDAHSGKALLEPMQGHTDPVTSVAFSPDGSRIA 1241

Query: 274  ISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             S   D+ + I+  D  S     E +        S ++SPD S+I   S   G E + + 
Sbjct: 1242 -SGSDDKTIRIW--DAHSGKALLEPMQGHTNWVTSVAFSPDGSRIASGS---GDETIRIW 1295

Query: 332  QSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             ++              +     +SP G  IA          I +      +
Sbjct: 1296 DAHSGKALLEPMQGHTDWVTSVAFSPDGSRIASGSGDNT---IRIWDAHSGK 1344



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 59/159 (37%), Gaps = 12/159 (7%)

Query: 183  SVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             + SG    ++ + D   G  +          +    FSP+  ++A  + D    +R++ 
Sbjct: 1196 RIASGSGDETIRIWDAHSGKALLEPMQGHTDPVTSVAFSPDGSRIASGSDD--KTIRIWD 1253

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTN 299
              +      + +    + + +  FS +G R   S   DE + I+  D  S     E +  
Sbjct: 1254 AHSG-KALLEPMQGHTNWVTSVAFSPDGSRIA-SGSGDETIRIW--DAHSGKALLEPMQG 1309

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                  S ++SPD S+I   S   G   + +  ++    
Sbjct: 1310 HTDWVTSVAFSPDGSRIASGS---GDNTIRIWDAHSGKA 1345



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 56/172 (32%), Gaps = 14/172 (8%)

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            I +    +++  +S +G+    +     A+ +++ D        +        S ++SPD
Sbjct: 920  IPSQHGSVISVAYSPDGRSVA-AGCVYGAVVVFNADTGEPLLPPMQGHTSYITSVAFSPD 978

Query: 313  SSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             S I    D    + + +  + +G       Q          +SP G  IA         
Sbjct: 979  GSCIASGLD---DKTIRIWDAHSGKALLEPMQGHTHRITSVAFSPDGSRIA---SGSGDE 1032

Query: 372  AIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYS 420
             I +      +  L     +     +  +SP G  +       GD   +++ 
Sbjct: 1033 TIRIWDAHSGKALLEPIQGHTDPVTSVAFSPDGSRIA---SGSGDETIRIWD 1081


>gi|124008195|ref|ZP_01692892.1| WD-40 repeat [Microscilla marina ATCC 23134]
 gi|123986294|gb|EAY26116.1| WD-40 repeat [Microscilla marina ATCC 23134]
          Length = 743

 Score = 84.7 bits (208), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 21/218 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +        ++   FSP+ +KV   + D     +++  D    +  K +   R  + +  
Sbjct: 356 HTLSGHTNSVYSASFSPDGKKVITGSED--GTAKIWSFD---GKLLKTLTGHRKAVYSTE 410

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DRE 323
           FS NGK  L +   D+   ++S+D        L        SA +SP+ S+IV  S DR 
Sbjct: 411 FSPNGKYVL-TASADKTAKVWSLD--GKIIRDLKRHRRAIFSARFSPNGSKIVTASADRT 467

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            +    +    G    R+ +    + +   +SP G  I             +    G++ 
Sbjct: 468 AR----IWSFTGRQLHRL-KGHRKAVYAATFSPNGQYILTASEDNTA---KLWDVQGTKV 519

Query: 384 RLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             L  E+S      +SP+GR ++ + K   D  +KL++
Sbjct: 520 STLKSENSPFSYAVFSPNGRYILTASK---DNTAKLWT 554



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 52/251 (20%), Positives = 91/251 (36%), Gaps = 27/251 (10%)

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
           KD  R+ VF         Q I         + W++ G    +   +           F  
Sbjct: 321 KDFIRTAVF-----SKNNQYIVTASGDNTAKIWSTRGQ---LLHTLSGHTNSVYSASFS- 371

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT-GEKGDFNSRILFVSESVVSGII 189
               D K++I      +   W     +    + +++T   K  +++      + V++   
Sbjct: 372 ---PDGKKVITGSEDGTAKIW-----SFDGKLLKTLTGHRKAVYSTEFSPNGKYVLTASA 423

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             +  V   DG  IR L   R + +F  RFSPN  K+  A+ D     R++       R 
Sbjct: 424 DKTAKVWSLDGKIIRDLKRHR-RAIFSARFSPNGSKIVTASAD--RTARIWSF---TGRQ 477

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             R+   R  + A  FS NG+  L +  +D    ++  D+Q      L +       A +
Sbjct: 478 LHRLKGHRKAVYAATFSPNGQYIL-TASEDNTAKLW--DVQGTKVSTLKSENSPFSYAVF 534

Query: 310 SPDSSQIVFES 320
           SP+   I+  S
Sbjct: 535 SPNGRYILTAS 545



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 70/196 (35%), Gaps = 19/196 (9%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +   +  +    FS NG   + +   D+   ++SV         L        +A +S 
Sbjct: 275 VLKGHQKAVATAVFSPNGSYLV-TASSDKTAKVWSV--TGRLIATLRGHKDFIRTAVFSK 331

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           ++  IV  S   G     +  + G     +S     S +   +SP G  +      G   
Sbjct: 332 NNQYIVTAS---GDNTAKIWSTRGQLLHTLS-GHTNSVYSASFSPDGKKVITGSEDGTA- 386

Query: 372 AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-----G 425
              +   DG   + L      + +  +SP+G+ ++ +     D  +K++S+D        
Sbjct: 387 --KIWSFDGKLLKTLTGHRKAVYSTEFSPNGKYVLTAS---ADKTAKVWSLDGKIIRDLK 441

Query: 426 RNETLINTPAYASDPQ 441
           R+   I +  ++ +  
Sbjct: 442 RHRRAIFSARFSPNGS 457



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 50/131 (38%), Gaps = 8/131 (6%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +  F++R       +V+     +  +    G  +  L   R + ++   FSPN Q + 
Sbjct: 443 HRRAIFSARFSPNGSKIVTASADRTARIWSFTGRQLHRLKGHR-KAVYAATFSPNGQYIL 501

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            A+ D+       L D +  +             A  FS NG+  L +  KD    +++ 
Sbjct: 502 TASEDN----TAKLWDVQGTKVSTLKSENSPFSYA-VFSPNGRYIL-TASKDNTAKLWTK 555

Query: 288 -DLQSNATERL 297
            DL +N   +L
Sbjct: 556 PDLAANTPYQL 566


>gi|242770782|ref|XP_002342049.1| F-box and wd40 domain protein, putative [Talaromyces stipitatus ATCC
            10500]
 gi|218725245|gb|EED24662.1| F-box and wd40 domain protein, putative [Talaromyces stipitatus ATCC
            10500]
          Length = 1260

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 61/351 (17%), Positives = 130/351 (37%), Gaps = 50/351 (14%)

Query: 108  AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
            +Q++V+G       D+     +LWD K   ++  +           +A +  D +  S +
Sbjct: 835  SQMVVSGS-----DDK---TIKLWDTKTGSEL--QTLKGHSNGVYSVAFSYDDQMVASGS 884

Query: 168  GE-----------------KGDFNS--RILFVSES--VVSGIIKNSLCVMDR-DGANIRY 205
             +                 KG  +S   + F  +   VVSG   N++ + D   G+ ++ 
Sbjct: 885  RDNTIKLWNAKTSSELQIFKGHSDSIRSVAFSHDGQMVVSGSRDNTIKLWDAKTGSELQT 944

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            L       +    FS + Q VA  + D+     + L D +       +      + +  F
Sbjct: 945  LKGHSHMGVNSVAFSHDGQMVASGSSDE----TIKLWDAKTGSELHTLKGHSHWVNSVAF 1000

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREG 324
            S +G+    S   D  + ++  D+++ +  +        +   ++S DS  +V  SD   
Sbjct: 1001 SHDGQMVA-SGSDDHTIKLW--DVKTGSELQTLKGHSGRVKPVAFSYDSQMVVSGSD--- 1054

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
               + +  +    + +  +   +  +   +S  G ++     SG    +   K  GS+ R
Sbjct: 1055 DYTVKLWDTKTGSELQTLEGHSSWVYSVAFSHDGQMVV--SGSGGTIKLWDAKT-GSELR 1111

Query: 385  LLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             L     ++ +  +S  G+ +I       D   KL+ +      +TL + P
Sbjct: 1112 TLKGHSGDIYSVVFSYDGQMVISCSD---DNTIKLWDVKTGSELQTLKSHP 1159



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 84/249 (33%), Gaps = 17/249 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VVSG   N++ + D    +           ++   FS + Q V   + D+     + L D
Sbjct: 628 VVSGSYDNTIKLWDAKTGSELQTLKGHSSWVYSVAFSHDSQMVVSGSDDN----TIKLWD 683

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            +     + + +    + +  FS N  + ++S   D+ + +++     +  + L      
Sbjct: 684 AKTGSELQTLKDHSDSVHSVAFSHN-DQMVVSGSDDKTIKLWNT-KTGSELQTLRGHYGH 741

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++S +   +V  SD      + +       + +  +      +   +S    ++  
Sbjct: 742 IYSVAFSHNDQIVVSGSD---DYTIKLWDIKTGSELQTLEGYLRYIYSVAFSHDDQMVVS 798

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +      I +           +    S++ +  +S   + ++       D   KL+  
Sbjct: 799 GSYDNT---IKLWDAKTGSLLQTLKGHSSHVYSVAFSHDSQMVVSGSD---DKTIKLWDT 852

Query: 422 DLNGRNETL 430
                 +TL
Sbjct: 853 KTGSELQTL 861



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 81/229 (35%), Gaps = 19/229 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                   ++    FS + Q V   +YD+     + L D +     + +    S + +  
Sbjct: 607 QTLEGHSGLVHSVAFSHDGQMVVSGSYDN----TIKLWDAKTGSELQTLKGHSSWVYSVA 662

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           FS +  + ++S   D  + ++  D ++ +  + L +      S ++S +   +V  SD  
Sbjct: 663 FSHD-SQMVVSGSDDNTIKLW--DAKTGSELQTLKDHSDSVHSVAFSHNDQMVVSGSD-- 717

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +    + +  +      +   +S   D I  +    + + I +       E
Sbjct: 718 -DKTIKLWNTKTGSELQTLRGHYGHIYSVAFSHN-DQIVVS--GSDDYTIKLWDIKTGSE 773

Query: 384 RLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
              +E     + +  +S   + ++       D   KL+        +TL
Sbjct: 774 LQTLEGYLRYIYSVAFSHDDQMVVSGSY---DNTIKLWDAKTGSLLQTL 819



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 77/206 (37%), Gaps = 13/206 (6%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +     + I  +  ++       + +     ++ +  FS +G + ++S   D  + ++ 
Sbjct: 583 IFLDSRPKQIHMLPQVEDNWSPGLQTLEGHSGLVHSVAFSHDG-QMVVSGSYDNTIKLW- 640

Query: 287 VDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            D ++ +  + L        S ++S DS  +V  SD      + +  +    + +  +D 
Sbjct: 641 -DAKTGSELQTLKGHSSWVYSVAFSHDSQMVVSGSD---DNTIKLWDAKTGSELQTLKDH 696

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSL 404
             S     +S   D +  +    +   +    K GS+ + L     ++ +  +S + + +
Sbjct: 697 SDSVHSVAFSHN-DQMVVSGSDDKTIKLW-NTKTGSELQTLRGHYGHIYSVAFSHNDQIV 754

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETL 430
           +       D   KL+ I      +TL
Sbjct: 755 VSGSD---DYTIKLWDIKTGSELQTL 777


>gi|91793266|ref|YP_562917.1| peptidase S9, prolyl oligopeptidase active site region [Shewanella
           denitrificans OS217]
 gi|91715268|gb|ABE55194.1| peptidase S9, prolyl oligopeptidase active site region [Shewanella
           denitrificans OS217]
          Length = 683

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 90/258 (34%), Gaps = 74/258 (28%)

Query: 262 APRFSSNGKRALI-----SVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSS 314
           +   S++G + +          + + D+Y +DL     +  +LT+        +++PD  
Sbjct: 40  SAAVSNDGTKLVYGVKIKDANNEASSDLYLLDLSDKNAKPMQLTSAAGTESDVTFAPDGK 99

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---------- 364
            I F + R G  Q+Y +  NG +  +++ D          S  G  +  T          
Sbjct: 100 SIYFMASRSGSSQIYKLALNGGEAIQVT-DLPLDVNGYKLSQDGKQVVMTLRVFPECKDL 158

Query: 365 -------------KFSGEKF-----------------AIGVMKKDGSQERL---LVEDSN 391
                        K +G ++                  + V   +G++      + +  +
Sbjct: 159 QCSKDKFQAEKDKKTTGREYKQLMVRHWDTWEDHARNHLFVAPLNGNKITTAINVTQGRD 218

Query: 392 LQAP----------TWSPSGRSLIF-----SRKKDGDTGSKLYSIDLNGRNETLIN---- 432
            + P          T++P G+ +++     S  +   T   L+ + + G   T +     
Sbjct: 219 TETPPKPFSGMEEVTFTPDGQHIVYSAKAPSTDQAWTTNYDLWQVSVKGGETTNLTPSNA 278

Query: 433 ----TPAYASDPQWVGFM 446
                P +++D +++ ++
Sbjct: 279 AWDAQPVFSADGRYLAYL 296



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/314 (14%), Positives = 94/314 (29%), Gaps = 73/314 (23%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATY----DDEDILRVYLMDT-RIDRAPKRIGN 255
            N++ L       L     S +  K+ Y       ++E    +YL+D    +  P ++ +
Sbjct: 27  FNVQQLVNLNK--LHSAAVSNDGTKLVYGVKIKDANNEASSDLYLLDLSDKNAKPMQLTS 84

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                    F+ +GK       +  +  IY + L      ++T+          S D  Q
Sbjct: 85  AAGTESDVTFAPDGKSIYFMASRSGSSQIYKLALNGGEAIQVTDLPLDVNGYKLSQDGKQ 144

Query: 316 IV------------------FESDRE----------------------GKEQLYVMQSNG 335
           +V                  F+++++                       +  L+V   NG
Sbjct: 145 VVMTLRVFPECKDLQCSKDKFQAEKDKKTTGREYKQLMVRHWDTWEDHARNHLFVAPLNG 204

Query: 336 SDQKR---ISQDKEASYFDPVWS--------PQGDLIAFTKFSG-------EKFAIGVMK 377
           +       ++Q ++       +S        P G  I ++  +          + +  + 
Sbjct: 205 NKITTAINVTQGRDTETPPKPFSGMEEVTFTPDGQHIVYSAKAPSTDQAWTTNYDLWQVS 264

Query: 378 KDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSI----DLNGRNETLI 431
             G +   L   +      P +S  GR L +         +  Y I    +  G    + 
Sbjct: 265 VKGGETTNLTPSNAAWDAQPVFSADGRYLAYLAMSKPGFEADRYKIMLRDNATGDEREV- 323

Query: 432 NTPAYASDPQWVGF 445
             P +   P  + F
Sbjct: 324 -APLWDRSPSSINF 336



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 89/263 (33%), Gaps = 41/263 (15%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     L V   D     +   +R+ +   P    N  K+  A         + +   R
Sbjct: 174 TGREYKQLMVRHWD----TWEDHARNHLFVAP---LNGNKITTA---------INVTQGR 217

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLT 298
               P +   F  M     F+ +G+  + S +            D++ V ++   T  LT
Sbjct: 218 DTETPPKP--FSGME-EVTFTPDGQHIVYSAKAPSTDQAWTTNYDLWQVSVKGGETTNLT 274

Query: 299 -NTLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +    +    +S D   +         FE+DR    ++ +  +   D++ ++   + S 
Sbjct: 275 PSNAAWDAQPVFSADGRYLAYLAMSKPGFEADR---YKIMLRDNATGDEREVAPLWDRSP 331

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               +S  G  +  T     + +I  +       R +    +      +   + +IF   
Sbjct: 332 SSINFSSDGRTLYVTAQDVGQVSIFEVNTQFGDVRPIYNQGSSHLVAVT--SKGIIFDNT 389

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
              + G  LY I+L G + T + 
Sbjct: 390 SLTEPG-DLYKINLEGEHLTRLT 411



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 8/184 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G           +  +      L  +   G     LTPS      +P FS + 
Sbjct: 231 EVTFTPDGQHIVYSAKAPSTDQAWTTNYDLWQVSVKGGETTNLTPSNAAWDAQPVFSADG 290

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D  ++ L D       +    +     +  FSS+G+   ++ Q  
Sbjct: 291 RYLAYLAMSKPGFEADRYKIMLRDNATGDEREVAPLWDRSPSSINFSSDGRTLYVTAQDV 350

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
             + I+ V+ Q      + N    ++ A  S     I+F++    +   LY +   G   
Sbjct: 351 GQVSIFEVNTQFGDVRPIYNQGSSHLVAVTS---KGIIFDNTSLTEPGDLYKINLEGEHL 407

Query: 339 KRIS 342
            R++
Sbjct: 408 TRLT 411


>gi|161528944|ref|YP_001582770.1| hypothetical protein Nmar_1436 [Nitrosopumilus maritimus SCM1]
 gi|160340245|gb|ABX13332.1| hypothetical protein Nmar_1436 [Nitrosopumilus maritimus SCM1]
          Length = 596

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 92/263 (34%), Gaps = 34/263 (12%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFR 257
           G   +   P+R Q ++   +S + + + ++ Y  +  D +  YL     D       N  
Sbjct: 272 GTVEKIPKPNRMQSMYLLDWSNDGKSILFSYYLQKTEDSITPYLGILSTDDYEITTLNIP 331

Query: 258 SM------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI---NISAS 308
           ++      I A +FS +GK       +    +++  D++++   +LTN       +    
Sbjct: 332 TLLETDEKIRAAKFSPDGKYIHFVANEG---NLFQYDIETSHVLKLTNFSEWVNFDYYHY 388

Query: 309 YSPDSSQ--IVFESDREGKEQL------YVMQSNGSDQKRISQDKE----ASYFDPVWSP 356
           Y  D  +  IV   DRE            ++     ++  +    E            SP
Sbjct: 389 YEEDPEKYSIVISLDRESYYDDPSEQGSILLDIGNGEENSVDNAHELISGDELHHFDISP 448

Query: 357 QGDLIAFTKFSGEKF-----AIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIF--SR 408
            G  I F K     +      +     +G+   +         P+ W+P G  +++  S 
Sbjct: 449 DGKKILFHKTIESSYGWADRVLAYYTPEGNVVEIPNSQVKCGHPSKWTPDGEMIVYGVSS 508

Query: 409 KKDGDTGSKLYSIDLNGRNETLI 431
              G  G  L+ I  +G    +I
Sbjct: 509 CGRGAPGGTLHIISTDGSYHEII 531



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 11/117 (9%)

Query: 266 SSNGKRALIS----VQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF-- 318
           S +GK+ L           A  + +          + N+       S ++PD   IV+  
Sbjct: 447 SPDGKKILFHKTIESSYGWADRVLAYYTPEGNVVEIPNSQVKCGHPSKWTPDGEMIVYGV 506

Query: 319 ESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            S   G     L+++ ++GS  + I           V SP G  + + +     F I
Sbjct: 507 SSCGRGAPGGTLHIISTDGSYHEIILGYNNDRPDTFVISPDGLSLVYLR--ENNFEI 561



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 50/168 (29%), Gaps = 26/168 (15%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------FESDREGKE 326
                 D    + S + +  +    T  L  ++   +S             +ES      
Sbjct: 203 AFYTNPDGEEFMTSSNPEKKSCTNFTANLSAHVPGEWSVYVKAFWMENEILYESTSHSIT 262

Query: 327 QLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKF---------------SGEK 370
            L          ++I   ++  S +   WS  G  I F+ +               S + 
Sbjct: 263 YLVKESLFQGTVEKIPKPNRMQSMYLLDWSNDGKSILFSYYLQKTEDSITPYLGILSTDD 322

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           + I  +        LL  D  ++A  +SP G+ + F   +       +
Sbjct: 323 YEITTLNI----PTLLETDEKIRAAKFSPDGKYIHFVANEGNLFQYDI 366


>gi|111220179|ref|YP_710973.1| WD repeat-containing protein [Frankia alni ACN14a]
 gi|111147711|emb|CAJ59369.1| WD-repeat protein [Frankia alni ACN14a]
          Length = 741

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 81/276 (29%), Gaps = 22/276 (7%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
              F+     ++ +   G     +      G     L+  +  ++    FSP+ + +A  
Sbjct: 466 SAAFSPDGALLATTSKDGTRLWDVAT----GRTSLTLSGRKSLVVHGCAFSPDGKLLATT 521

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
             D        + D    R    +   R  +    FS +G   L++    +         
Sbjct: 522 GSDK----TARIWDVASGRQTVTLTGHRGPVYGCAFSPDGS--LVATTGTDRTVRLWGSS 575

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                  L          ++SPD   +V      G E   +   +  +            
Sbjct: 576 TGKNIATLNGHRGTVYGCAFSPDGRLLV----SAGAESTLLWDVSVGEALMSLPGHTNFA 631

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               +SP G L+A     G +     +   GS   +     + Q+  +SP GR L  +  
Sbjct: 632 GGCAFSPDGSLLATAGNEGTR-----LTDAGSGSTVATLPGSAQSCAFSPDGRLLATAST 686

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
            D    + L+ +       TL    +      +  F
Sbjct: 687 DD---TALLWDVSTGAAIATLTGHSSTVMSCAFAPF 719



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 81/243 (33%), Gaps = 20/243 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R      ++ +    FSP+   +A  + D   +  V    T +  + ++          
Sbjct: 453 ARATLKGHERDVTSAAFSPDGALLATTSKDGTRLWDVATGRTSLTLSGRKSLVVHGC--- 509

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             FS +GK    +   D+   I+ V      T  LT         ++SPD S +      
Sbjct: 510 -AFSPDGKLLATTGS-DKTARIWDV-ASGRQTVTLTGHRGPVYGCAFSPDGSLVATT--- 563

Query: 323 EGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            G ++   +  + + +   + +    + +   +SP G L+       E   +  +    +
Sbjct: 564 -GTDRTVRLWGSSTGKNIATLNGHRGTVYGCAFSPDGRLLV--SAGAESTLLWDVSVGEA 620

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              L    +      +SP G  L       G+ G++L   D  G   T+   P  A    
Sbjct: 621 LMSLPGHTNFAGGCAFSPDGSLLA----TAGNEGTRL--TDA-GSGSTVATLPGSAQSCA 673

Query: 442 WVG 444
           +  
Sbjct: 674 FSP 676


>gi|108805695|ref|YP_645632.1| peptidase S9, prolyl oligopeptidase active site region [Rubrobacter
           xylanophilus DSM 9941]
 gi|108766938|gb|ABG05820.1| peptidase S9, prolyl oligopeptidase active site region [Rubrobacter
           xylanophilus DSM 9941]
          Length = 606

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 86/222 (38%), Gaps = 17/222 (7%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           L  P  SP+  + A++         V+       R P R+           ++ +G+  +
Sbjct: 18  LSHPLVSPDGGRAAWSWSRLGPAADVFFAPLDGSRPPARLTETPEDTFPVSWTPDGEGLV 77

Query: 274 ISVQKDE--AMDIYSVDL-QSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQ- 327
           +   +       ++ V L +    E LT+    F        P+   +V+ ++ + +   
Sbjct: 78  VRQDRGGDERARLFLVRLRRPGEMEPLTDPEPDFYVRGGQLHPNGRWLVYGANADPETGE 137

Query: 328 ------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKD 379
                 +Y       + + +++ +      P  + QGDL+ + +         I V+  +
Sbjct: 138 EIEPTVVYRRDLRTGELRALARPRRGGPCRPELNRQGDLVLYQRHDEHPAGQQIWVVDIE 197

Query: 380 GSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKD-GDTGSKL 418
           G+++R +++   ++    TW P GR ++F+ + + G     L
Sbjct: 198 GAEDRKVLDFGPASKVEATWLPDGRRILFAAETERGRRPGVL 239



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 90/260 (34%), Gaps = 18/260 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVYLMDTRIDRAP 250
            +     DG+          +  F   ++P+ + +        D   R++L+  R     
Sbjct: 42  DVFFAPLDGSRPPARLTETPEDTFPVSWTPDGEGLVVRQDRGGDERARLFLVRLRRPGEM 101

Query: 251 KRIGNFRS--MILAPRFSSNGKRALISVQKDEAM-------DIYSVDLQSNATERLTNTL 301
           + + +      +   +   NG+  +     D           +Y  DL++     L    
Sbjct: 102 EPLTDPEPDFYVRGGQLHPNGRWLVYGANADPETGEEIEPTVVYRRDLRTGELRALARPR 161

Query: 302 -FINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                    +     ++++   E    +Q++V+   G++ +++     AS  +  W P G
Sbjct: 162 RGGPCRPELNRQGDLVLYQRHDEHPAGQQIWVVDIEGAEDRKVLDFGPASKVEATWLPDG 221

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSK 417
             I F   +      GV++  G + R L          + +P G +++      G T + 
Sbjct: 222 RRILFAAETERGRRPGVLEP-GGEVRWLAGGERDVERAFAAPDGTAVL-LEAAGGRTRAL 279

Query: 418 LYSIDLNGRNETLINTPAYA 437
           L  +D +   E  + TP  +
Sbjct: 280 L--VDPDSGEEGRLETPRGS 297



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 77/221 (34%), Gaps = 20/221 (9%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATE-RLTN 299
           M    +   + + +   +   P  S +G RA  S  +   A D++   L  +    RLT 
Sbjct: 1   MSGAAEGFLEELLSVPGL-SHPLVSPDGGRAAWSWSRLGPAADVFFAPLDGSRPPARLTE 59

Query: 300 TLFINISA-SYSPDSSQIVFESDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVW 354
           T   +    S++PD   +V   DR G E+    L  ++  G  +     + +        
Sbjct: 60  TP-EDTFPVSWTPDGEGLVVRQDRGGDERARLFLVRLRRPGEMEPLTDPEPDFYVRGGQL 118

Query: 355 SPQGDLIAFTKFSG-------EKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
            P G  + +   +        E   +        + R L          P  +  G  ++
Sbjct: 119 HPNGRWLVYGANADPETGEEIEPTVVYRRDLRTGELRALARPRRGGPCRPELNRQGDLVL 178

Query: 406 FSRKKDGDTGSKLYSIDLNGRNET--LINTPAYASDPQWVG 444
           + R  +   G +++ +D+ G  +   L   PA   +  W+ 
Sbjct: 179 YQRHDEHPAGQQIWVVDIEGAEDRKVLDFGPASKVEATWLP 219



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 95/312 (30%), Gaps = 22/312 (7%)

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F  +       ++T          W   G + LV  R  + G +R     RL+ V+ R+
Sbjct: 44  FFAPLDGSRPPARLTETPEDTFPVSWTPDG-EGLVV-RQDRGGDER----ARLFLVRLRR 97

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
               +        +          +        G +              I    +   D
Sbjct: 98  PGEMEPLTDPEPDF---------YVRGGQLHPNGRWLVYGANADPETGEEIEPTVVYRRD 148

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNF 256
                +R L   R      P  +     V Y  +D      +++++D       K +   
Sbjct: 149 LRTGELRALARPRRGGPCRPELNRQGDLVLYQRHDEHPAGQQIWVVDIEGAEDRKVLDFG 208

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQ 315
            +  +   +  +G+R L + + +         L+     R       ++  ++ +PD + 
Sbjct: 209 PASKVEATWLPDGRRILFAAETERGRRPGV--LEPGGEVRWLAGGERDVERAFAAPDGTA 266

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           ++ E+   G+ +  ++  +  ++ R+ +    S+     +  G    + +       + +
Sbjct: 267 VLLEA-AGGRTRALLVDPDSGEEGRL-ETPRGSFVPLARTGDGWAGVYREARSPADLVAL 324

Query: 376 MKKDGSQERLLV 387
                   R L 
Sbjct: 325 -DPRRGAMRSLT 335


>gi|313681097|ref|YP_004058836.1| peptidase s9 prolyl oligopeptidase active site domain protein
           [Oceanithermus profundus DSM 14977]
 gi|313153812|gb|ADR37663.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Oceanithermus profundus DSM 14977]
          Length = 600

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 77/231 (33%), Gaps = 14/231 (6%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             +V +   +    +           AP    +         F+ +G   L   +     
Sbjct: 24  GGRVYWTEQEGGRTVLTGWDGAPRRYAPDHALSPGVGYGGGAFNLDGDAVLYVAEG---- 79

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++ +  +      LT           SPD +++V+    EG++ L V  ++     R+ 
Sbjct: 80  RVWRLPREGREPVPLTPPFGAAADPQPSPDGARVVYVHHHEGRDVLAVAGADPDGWPRVW 139

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVMKKDGSQE---RLLVEDSN--L 392
                 Y  P WSP G  +A+ ++           + + + +G      R L   +   +
Sbjct: 140 ARGADFYMQPAWSPDGAWLAWVEWDHPNMPWDGARLMLARVEGGGPAEVRQLAGGARTPV 199

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             P + P GR L +    +G    +L  +DL     ++        +P W 
Sbjct: 200 FQPLFDPEGRGLFWIENPEGAEFDRLVRLDLETGERSVWMEERALIEPAWS 250



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 88/283 (31%), Gaps = 35/283 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  + R+G     LTP       +P+ SP+  +V Y  + +   +   +     D  P+
Sbjct: 80  RVWRLPREGREPVPLTPPF-GAAADPQPSPDGARVVYVHHHEGRDVLA-VAGADPDGWPR 137

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKD-----EAMDIYSVDLQSNAT---ERLTNTLFI 303
                    + P +S +G               +   +    ++        +L      
Sbjct: 138 VWARGADFYMQPAWSPDGAWLAWVEWDHPNMPWDGARLMLARVEGGGPAEVRQLAGGART 197

Query: 304 NI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +    + P+   + +  + EG E   +++ +    +R    +E +  +P WS    +++
Sbjct: 198 PVFQPLFDPEGRGLFWIENPEGAEFDRLVRLDLETGERSVWMEERALIEPAWSQAQRVMS 257

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----TWS----------------PS- 400
           F    G    +   +   +    L   +  + P      W                 P  
Sbjct: 258 FG--PGGALYLRENRAGRAHLWRLTGGAPEELPLPEGAAWLASLSGDEAGLAALASGPDQ 315

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           G  ++F   +   T +  +   L+G           A D  WV
Sbjct: 316 GERVVFYDGEAWQTRAYGWPAGLDGGGAAPEGVRFQAEDGAWV 358



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 66/193 (34%), Gaps = 24/193 (12%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE- 234
           R+++V      G    ++   D DG   R      D    +P +SP+   +A+  +D   
Sbjct: 112 RVVYVHH--HEGRDVLAVAGADPDGW-PRVWARGAD-FYMQPAWSPDGAWLAWVEWDHPN 167

Query: 235 ---DILRVYLMDTRIDRA---PKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYS 286
              D  R+ L            +  G  R+ +  P F   G+        + A    +  
Sbjct: 168 MPWDGARLMLARVEGGGPAEVRQLAGGARTPVFQPLFDPEGRGLFWIENPEGAEFDRLVR 227

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVF--------ESDREGKEQLYVMQSNGSDQ 338
           +DL++           + I  ++S     + F          +R G+  L+ +   G   
Sbjct: 228 LDLETGERSVWMEERAL-IEPAWSQAQRVMSFGPGGALYLRENRAGRAHLWRL--TGGAP 284

Query: 339 KRISQDKEASYFD 351
           + +   + A++  
Sbjct: 285 EELPLPEGAAWLA 297



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 48/146 (32%), Gaps = 18/146 (12%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDLIAFTKFSG 368
             ++ +     G+  L          +R + D        Y    ++  GD + +     
Sbjct: 24  GGRVYWTEQEGGRTVLTGWD---GAPRRYAPDHALSPGVGYGGGAFNLDGDAVLYVAEG- 79

Query: 369 EKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-- 425
               +  + ++G +   L         P  SP G  +++    +G     +   D +G  
Sbjct: 80  ---RVWRLPREGREPVPLTPPFGAAADPQPSPDGARVVYVHHHEGRDVLAVAGADPDGWP 136

Query: 426 ----RNETLINTPAYASDPQWVGFMD 447
               R       PA++ D  W+ +++
Sbjct: 137 RVWARGADFYMQPAWSPDGAWLAWVE 162


>gi|323455994|gb|EGB11861.1| hypothetical protein AURANDRAFT_2904 [Aureococcus anophagefferens]
          Length = 281

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 79/241 (32%), Gaps = 19/241 (7%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +G    +  V D D              +    FSP+  +VA A+ D        + D
Sbjct: 19  VATGSCDKTARVWDADSGACLATLTGHGSFVRGVAFSPDGTRVATASQDH----TAKVWD 74

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  + +      + A  FS +G R   +  +D+   ++ +   +     L      
Sbjct: 75  AATGSLLRTLEGHELSVNAVAFSPDGHRLA-TASRDKTALVWDLRDDAAPPVVLEGHDSC 133

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               +++PD S++   S+    ++  V  +   ++    +  E       +SP G  +A 
Sbjct: 134 VNGCAFAPDGSRVATASN---DKRCIVWDAATGEELESLEGHENWVEGCAFSPDGARVAT 190

Query: 364 TKFSGEKFA----IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                        + VM   G  +R+           ++  G +L+ +   +      L 
Sbjct: 191 ASQDHHARVWEGGVCVMTLAGHGKRV-------NGVAFAGDGATLVTASDDETAKRWDLA 243

Query: 420 S 420
           +
Sbjct: 244 T 244



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 83/229 (36%), Gaps = 18/229 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S +   VA  + D        + D         +    S +    FS +G R   +  
Sbjct: 11  AVSGDGNWVATGSCDK----TARVWDADSGACLATLTGHGSFVRGVAFSPDGTRVA-TAS 65

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +D    ++  D  + +  R      ++++A ++SPD  ++   + R+    ++ ++ + +
Sbjct: 66  QDHTAKVW--DAATGSLLRTLEGHELSVNAVAFSPDGHRLA-TASRDKTALVWDLR-DDA 121

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQA 394
               + +  ++      ++P G  +A            V      +E   L   ++ ++ 
Sbjct: 122 APPVVLEGHDSCVNGCAFAPDGSRVATASNDKRCI---VWDAATGEELESLEGHENWVEG 178

Query: 395 PTWSPSGRSLIFSRKKDGDTGSK--LYSIDLNGRNETLINTPAYASDPQ 441
             +SP G  +  + +       +  +  + L G  +  +N  A+A D  
Sbjct: 179 CAFSPDGARVATASQDHHARVWEGGVCVMTLAGHGKR-VNGVAFAGDGA 226



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 47/156 (30%), Gaps = 7/156 (4%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDS 313
                + +   S +G     +   D+   ++  D  S A    LT         ++SPD 
Sbjct: 2   GHGGEVTSVAVSGDGNWVA-TGSCDKTARVW--DADSGACLATLTGHGSFVRGVAFSPDG 58

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +++   S         V  +      R  +  E S     +SP G  +A           
Sbjct: 59  TRVATASQ---DHTAKVWDAATGSLLRTLEGHELSVNAVAFSPDGHRLATASRDKTALVW 115

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            +         L   DS +    ++P G  +  +  
Sbjct: 116 DLRDDAAPPVVLEGHDSCVNGCAFAPDGSRVATASN 151



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 15/178 (8%)

Query: 170 KGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G F   + F  +   V +    ++  V D    ++       +  +    FSP+  ++A
Sbjct: 45  HGSFVRGVAFSPDGTRVATASQDHTAKVWDAATGSLLRTLEGHELSVNAVAFSPDGHRLA 104

Query: 228 YATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            A+ D        + D R D   P  +    S +    F+ +G R   +           
Sbjct: 105 TASRDK----TALVWDLRDDAAPPVVLEGHDSCVNGCAFAPDGSRVATASN---DKRCIV 157

Query: 287 VDLQSN-ATERLTNTLFINISASYSPDSSQIVFESD----REGKEQLYVMQSNGSDQK 339
            D  +    E L          ++SPD +++   S     R  +  + VM   G  ++
Sbjct: 158 WDAATGEELESLEGHENWVEGCAFSPDGARVATASQDHHARVWEGGVCVMTLAGHGKR 215


>gi|285017861|ref|YP_003375572.1| dipeptidyl peptidase precursor [Xanthomonas albilineans GPE PC73]
 gi|283473079|emb|CBA15584.1| hypothetical dipeptidyl peptidase precursor protein [Xanthomonas
           albilineans]
          Length = 692

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 51/322 (15%), Positives = 103/322 (31%), Gaps = 47/322 (14%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           +L DV     +    +  +P   R      S  ++Q    + G    R+    ++  SG 
Sbjct: 128 QLTDV----PLDVDSYHVAPQGDRVA---FSVAVFQDCLSDLGCTQKRLQAKKQAKASGE 180

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           + + L V   D  N                   + ++ +          +   +      
Sbjct: 181 VFDHLFVRHWDTWN-------------------DGRRNSLFVAALPGGAKAKPVIAAKAV 221

Query: 249 APKRIGNFRSMILAP----RFSSNGKRALISVQKDE-------AMDIYSVDLQSN-ATER 296
           +    G+  S          ++ +G+  + SV+            D+Y +D     A   
Sbjct: 222 SVTLDGDIPSKPFGGGDDYTWAPDGQSLVASVRVAGRQEPWSTNFDLYRLDPAGKAAPVN 281

Query: 297 LT-NTLFINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYF 350
           LT +    +    +S D   + + +  R G    + +L  M       + I    + S  
Sbjct: 282 LTASNPAWDAGPVFSADGKTLYYRAMKRPGFEADRFELMAMDVVSGKTRAIVPQWDRSAI 341

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               S  G  +  T     +  +  +     Q R LV D  +  P  +  G +L F+R  
Sbjct: 342 GIALSANGATLYTTADDMGQHPLFAVDLANGQVRRLVADGTIGTPVVA--GGTLAFTRD- 398

Query: 411 DGDTGSKLYSIDLNGRNETLIN 432
              +G ++   D +G++   I 
Sbjct: 399 SLKSGDQIVVADADGQHVRAIT 420



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 85/260 (32%), Gaps = 37/260 (14%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILR-----VYLMDTRIDR-----APKRIGNFRSMILAP 263
           +  P  +P+ + V +A    +         ++L D R  R      PKR+      +  P
Sbjct: 36  VSSPLLTPDGRSVIFAKQQMDKATDKASTALWLRDLRDLRGGDAATPKRLTPEGWNVNTP 95

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---- 319
           + S++GK       K     +Y++ L      +LT+      S   +P   ++ F     
Sbjct: 96  QLSADGKTVYFLSAKSGRQQVYALPLAGGTPRQLTDVPLDVDSYHVAPQGDRVAFSVAVF 155

Query: 320 ----SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--- 372
               SD  G  Q  +     +       D         W+       F            
Sbjct: 156 QDCLSD-LGCTQKRLQAKKQAKASGEVFDHLFVRHWDTWNDGRRNSLFVAALPGGAKAKP 214

Query: 373 -IGV----MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSID 422
            I      +  DG          +    TW+P G+SL+ S +  G      T   LY +D
Sbjct: 215 VIAAKAVSVTLDGDIPSKPFGGGDDY--TWAPDGQSLVASVRVAGRQEPWSTNFDLYRLD 272

Query: 423 LNGRNETLINTPAYASDPQW 442
             G+   +  T   AS+P W
Sbjct: 273 PAGKAAPVNLT---ASNPAW 289



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 63/197 (31%), Gaps = 10/197 (5%)

Query: 188 IIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLM 242
                L  +D  G A    LT S       P FS + + + Y          D   +  M
Sbjct: 263 STNFDLYRLDPAGKAAPVNLTASNPAWDAGPVFSADGKTLYYRAMKRPGFEADRFELMAM 322

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    +    +  +    +    S+NG     +        +++VDL +    RL     
Sbjct: 323 DVVSGKTRAIVPQWDRSAIGIALSANGATLYTTADDMGQHPLFAVDLANGQVRRLVADGT 382

Query: 303 INISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           I      +     + F  D  +  +Q+ V  ++G   + I+           +    +  
Sbjct: 383 IGT-PVVA--GGTLAFTRDSLKSGDQIVVADADGQHVRAITPSTSELLPGVAFG-DYEQF 438

Query: 362 AFTKFSGEKFAIGVMKK 378
           AF  ++ +     V+K 
Sbjct: 439 AFKGWNNDTVHGYVVKP 455


>gi|242804736|ref|XP_002484436.1| wd40 protein, putative [Talaromyces stipitatus ATCC 10500]
 gi|218717781|gb|EED17202.1| wd40 protein, putative [Talaromyces stipitatus ATCC 10500]
          Length = 1522

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 89/258 (34%), Gaps = 21/258 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D     ++Y        +    FSP+     +      D   + L D  
Sbjct: 1195 SGSEDQTIKLWDPATGTLKYTLVGHSHSVQSVAFSPDG----WLLASGSDDQTIKLWDPA 1250

Query: 246  IDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
             +     +    S ++ +  FS +GK    S   D+ + ++  D  + A    LT  L  
Sbjct: 1251 AEALSHALEEGHSRLVQSVAFSPDGKLLA-SGSSDKTIGLW--DPTTGAPIHILTGHLHS 1307

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              S ++SPD   +   S+    + +          K   +          +SP G L+A 
Sbjct: 1308 VQSVAFSPDGQLLASGSN---DQTIKFWDPAIGTLKHTLKGHSRPVQSVAFSPDGWLLAS 1364

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                     I +        R  ++       + T+SP GR L  S     D   KL+ +
Sbjct: 1365 GSNDKT---IRLWDLTTGTSRHTLKGHLDWVRSVTFSPDGRLLASSSD---DKTIKLWDL 1418

Query: 422  DLNGRNETLINTPAYASD 439
             + G  +  I+T    ++
Sbjct: 1419 AI-GALKHTISTDGVVTN 1435



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 49/266 (18%), Positives = 90/266 (33%), Gaps = 37/266 (13%)

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR-------YLTPSRDQILFEPR 218
            IT  +   +  I     +V+   +K  L      G  +                 +    
Sbjct: 898  ITPLQLYASGLIFAPKMAVIRKNLKKELPHWIHRGPRVEENWNPELQTLEGHSNFIQSVA 957

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+ Q +A  ++D      + L D         +    + + A  FS NG + L+S   
Sbjct: 958  FSPDGQLLASGSWDK----TIKLWDPVTGTLKYTLEGHSASVQAITFSPNG-QLLVSGSG 1012

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQS 333
            D+ +  +  D  + A +          S      ++SPD   + F S     + + +   
Sbjct: 1013 DQTIKFW--DPATGALKHTLEGQSKGGSHYVQLVAFSPDGRLLAFSSL---DQTIKLWDP 1067

Query: 334  NGSDQKRISQDKEA--SYFDP------------VWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                 KR  + +    S FDP             +SP G L+A   +  +   +      
Sbjct: 1068 ATGTLKRTLERRSDPFSDFDPHSEGHTDYIQSVAFSPDGQLLASGSWD-KTIKLWDPAIG 1126

Query: 380  GSQERLLVEDSNLQAPTWSPSGRSLI 405
              +  L+   S +Q+ T+SP  + L 
Sbjct: 1127 SLKHTLVGHLSTVQSVTFSPDSQLLA 1152



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 85/265 (32%), Gaps = 24/265 (9%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D     + Y        +    FS + Q +A  + D      + L D  
Sbjct: 1153 SGFNDKTIKLWDPATGALIYTLVGHSASVQSITFSADGQVLASGSEDQ----TIKLWDPA 1208

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNATE----RLTN 299
                   +      + +  FS +G   L S   D+ + ++  + +  S+A E    RL  
Sbjct: 1209 TGTLKYTLVGHSHSVQSVAFSPDG-WLLASGSDDQTIKLWDPAAEALSHALEEGHSRLVQ 1267

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            ++       +SPD   +   S     + + +          I      S     +SP G 
Sbjct: 1268 SVA------FSPDGKLLASGSS---DKTIGLWDPTTGAPIHILTGHLHSVQSVAFSPDGQ 1318

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            L+A +  + +            +  L      +Q+  +SP G  L+       D   +L+
Sbjct: 1319 LLA-SGSNDQTIKFWDPAIGTLKHTLKGHSRPVQSVAFSPDG-WLL--ASGSNDKTIRLW 1374

Query: 420  SIDLNGRNETLINTPAYASDPQWVG 444
             +       TL     +     +  
Sbjct: 1375 DLTTGTSRHTLKGHLDWVRSVTFSP 1399



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 80/239 (33%), Gaps = 30/239 (12%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D     ++Y        +    FSPN Q +   + D    ++ +   T 
Sbjct: 967  SGSWDKTIKLWDPVTGTLKYTLEGHSASVQAITFSPNGQLLVSGSGD--QTIKFWDPATG 1024

Query: 246  IDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNT 300
              +      +      +    FS +G+    S   D+ + ++  D  +   +R     + 
Sbjct: 1025 ALKHTLEGQSKGGSHYVQLVAFSPDGRLLAFS-SLDQTIKLW--DPATGTLKRTLERRSD 1081

Query: 301  LFINISA------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             F +               ++SPD   +   S     + + +        K       ++
Sbjct: 1082 PFSDFDPHSEGHTDYIQSVAFSPDGQLLASGS---WDKTIKLWDPAIGSLKHTLVGHLST 1138

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
                 +SP   L+A + F+ +   +             L+   +++Q+ T+S  G+ L 
Sbjct: 1139 VQSVTFSPDSQLLA-SGFNDKTIKLW--DPATGALIYTLVGHSASVQSITFSADGQVLA 1194



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 80/229 (34%), Gaps = 30/229 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRK---QIIGKKFFS-----SPASWRKIAH------TIS 159
            G+V+  G +   +  +LWD         ++G          SP  W   +        + 
Sbjct: 1190 GQVLASGSEDQTI--KLWDPATGTLKYTLVGHSHSVQSVAFSPDGWLLASGSDDQTIKLW 1247

Query: 160  DDIYQSITGEKGDFNSRILFVSESVV------SGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            D   ++++    + +SR++             SG    ++ + D       ++       
Sbjct: 1248 DPAAEALSHALEEGHSRLVQSVAFSPDGKLLASGSSDKTIGLWDPTTGAPIHILTGHLHS 1307

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +    FSP+ Q +A  + D      +   D  I      +      + +  FS +G   L
Sbjct: 1308 VQSVAFSPDGQLLASGSNDQ----TIKFWDPAIGTLKHTLKGHSRPVQSVAFSPDG-WLL 1362

Query: 274  ISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
             S   D+ + ++  DL +  +   L   L    S ++SPD   +   SD
Sbjct: 1363 ASGSNDKTIRLW--DLTTGTSRHTLKGHLDWVRSVTFSPDGRLLASSSD 1409



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 45/142 (31%), Gaps = 19/142 (13%)

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            ++SPD   +   S     + + +        K   +   AS     +SP G L+      
Sbjct: 957  AFSPDGQLLASGS---WDKTIKLWDPVTGTLKYTLEGHSASVQAITFSPNGQLLV---SG 1010

Query: 368  GEKFAIGVMKKDGSQERLLVEDSN------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 I          +  +E  +      +Q   +SP GR L FS     D   KL+  
Sbjct: 1011 SGDQTIKFWDPATGALKHTLEGQSKGGSHYVQLVAFSPDGRLLAFSSL---DQTIKLWD- 1066

Query: 422  DLNG---RNETLINTPAYASDP 440
               G   R     + P    DP
Sbjct: 1067 PATGTLKRTLERRSDPFSDFDP 1088


>gi|240169435|ref|ZP_04748094.1| WD-40 repeat-containing protein [Mycobacterium kansasii ATCC 12478]
          Length = 769

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 81/248 (32%), Gaps = 24/248 (9%)

Query: 183 SVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +  G    ++ + D + G  +          +    FSP+ +++   + D      V +
Sbjct: 224 RIACGGNNGTIQIWDLNTGRTVGKPLAGHQGPVIALAFSPDGRRIISGSADQ----TVRV 279

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +   +       +L+  FS +G R   S   D  + ++  D        +T   
Sbjct: 280 WDAATGQPIGQQTTG-GSVLSVAFSPDGTRIA-SANSDGTIQLWDADATHAVGPAMTGHA 337

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++SPD ++I     ++   +L+   + G    R       +     +SP G  +
Sbjct: 338 GNVYSVAFSPDGTRIA-SGGQDKTVRLWNADT-GQPVGRPLVGHRWTVGTVAFSPDGKRV 395

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTW--------SPSGRSLIFSRKKDG 412
           A +        +   +      + L        +P W        SP GR +       G
Sbjct: 396 A-SGSGDRTVRLWSAEPGPLVGQSLTPPGWTPSSPGWVKNVKVAVSPDGRWIA-----SG 449

Query: 413 DTGSKLYS 420
             G  L+ 
Sbjct: 450 GDGVALWD 457



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 72/216 (33%), Gaps = 24/216 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISV 276
            FSP+  ++        D   V L D    R     +    S +    FS +G R     
Sbjct: 516 AFSPDGTRIV----SGGDDQTVRLWDVATGRQIGDPMTGHSSDVKGVAFSPDGTRIASGS 571

Query: 277 QKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +    +   +   Q      +  T +  +  S  +SPD  +I  + D      + +  + 
Sbjct: 572 RDGVRLWDATTARQVGGLMAIGGTESRGVE-SVVFSPDGRRIAADEDTVAGTTVRLWDTA 630

Query: 335 GSDQ--KRISQDKEASY-------FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER- 384
                 + ++     SY           +SP G  IA T +      + +   D  Q   
Sbjct: 631 TGKPVGRPMTAKTLMSYPGLLLYEMSVAFSPDGKRIASTVWD---HTVRLWDADTGQPVG 687

Query: 385 --LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             L    +++ +  +SP G  L+ S  +DG     L
Sbjct: 688 APLRGHTADVTSVAFSPDGTFLV-SGSEDGTVRLWL 722



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 112/377 (29%), Gaps = 75/377 (19%)

Query: 129 RLWDVKDRKQIIGKKFFSS-------PASWRKIAHTI--------SDDIY---QSITGEK 170
           R+WD    + I  +    S       P   R  +           +D  +    ++TG  
Sbjct: 278 RVWDAATGQPIGQQTTGGSVLSVAFSPDGTRIASANSDGTIQLWDADATHAVGPAMTGHA 337

Query: 171 GDFNSRILFVSESV-VSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           G+  S       +   SG    ++ + + D G  +          +    FSP+ ++VA 
Sbjct: 338 GNVYSVAFSPDGTRIASGGQDKTVRLWNADTGQPVGRPLVGHRWTVGTVAFSPDGKRVAS 397

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-----ILAPRFSSNGKRAL---------- 273
            + D    L        + ++    G   S       +    S +G+             
Sbjct: 398 GSGDRTVRLWSAEPGPLVGQSLTPPGWTPSSPGWVKNVKVAVSPDGRWIASGGDGVALWD 457

Query: 274 -----------------ISVQKDE-------AMDIYSVDLQSNATERLTNTLFINISASY 309
                            +++ +D           +  +D+ +          +     ++
Sbjct: 458 PATGQAIRAPITEYGEFVALSRDGKRIAAMGDGKVQVLDVGTGRPVGAPVENWEVRIVAF 517

Query: 310 SPDSSQIVFESDREGKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SPD ++IV      G +Q   +   + G           +      +SP G  IA     
Sbjct: 518 SPDGTRIV----SGGDDQTVRLWDVATGRQIGDPMTGHSSDVKGVAFSPDGTRIASGSRD 573

Query: 368 GEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G +       +       +   E   +++  +SP GR +         T  +L+     G
Sbjct: 574 GVRLWDATTARQVGGLMAIGGTESRGVESVVFSPDGRRIAADEDTVAGTTVRLWDT-ATG 632

Query: 426 RN-------ETLINTPA 435
           +        +TL++ P 
Sbjct: 633 KPVGRPMTAKTLMSYPG 649



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 49/332 (14%), Positives = 101/332 (30%), Gaps = 57/332 (17%)

Query: 117 IKEGKDRLRVEFRLW--DVKD--RKQIIGKKFFSSPASWRKIAHTIS----DDIYQSITG 168
            +          RLW  D      + ++G ++     ++      ++    D   +  + 
Sbjct: 350 TRIASGGQDKTVRLWNADTGQPVGRPLVGHRWTVGTVAFSPDGKRVASGSGDRTVRLWSA 409

Query: 169 EKGDFNSRILFVSESVVS--GIIKNSLCVMDRDGANIRYLTPSRDQILFE---------- 216
           E G    + L       S  G +KN    +  DG   R++    D +             
Sbjct: 410 EPGPLVGQSLTPPGWTPSSPGWVKNVKVAVSPDG---RWIASGGDGVALWDPATGQAIRA 466

Query: 217 P--------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           P          S + +++A       D     L           + N+   +    FS +
Sbjct: 467 PITEYGEFVALSRDGKRIA----AMGDGKVQVLDVGTGRPVGAPVENWE--VRIVAFSPD 520

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKE 326
           G R +      +   +   D+ +       +T         ++SPD ++I   S R+G  
Sbjct: 521 GTRIV---SGGDDQTVRLWDVATGRQIGDPMTGHSSDVKGVAFSPDGTRIASGS-RDGV- 575

Query: 327 QLY--VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE- 383
           +L+             I   +       V+SP G  IA  + +     + +      +  
Sbjct: 576 RLWDATTARQVGGLMAIGGTESRGVESVVFSPDGRRIAADEDTVAGTTVRLWDTATGKPV 635

Query: 384 -RLLVEDSNLQAP---------TWSPSGRSLI 405
            R +   + +  P          +SP G+ + 
Sbjct: 636 GRPMTAKTLMSYPGLLLYEMSVAFSPDGKRIA 667



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 95/260 (36%), Gaps = 40/260 (15%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           R++  G D+     RLWDV   +QI G       +  + +A                 F+
Sbjct: 523 RIVSGGDDQ---TVRLWDVATGRQI-GDPMTGHSSDVKGVA-----------------FS 561

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                ++     G+         + G  +  +  +  + +    FSP+ +++A A  D  
Sbjct: 562 PDGTRIASGSRDGVRLWDATTARQVGG-LMAIGGTESRGVESVVFSPDGRRIA-ADEDTV 619

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAP---------RFSSNGKRALISVQKDEAMDIY 285
               V L DT   +   R    ++++  P          FS +GKR   S   D  + ++
Sbjct: 620 AGTTVRLWDTATGKPVGRPMTAKTLMSYPGLLLYEMSVAFSPDGKRIA-STVWDHTVRLW 678

Query: 286 SVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--KRI 341
             D  +       L        S ++SPD + +V  S+ +G  +L++   + +     ++
Sbjct: 679 --DADTGQPVGAPLRGHTADVTSVAFSPDGTFLVSGSE-DGTVRLWLNYPDAASALCAKL 735

Query: 342 SQDKEASYFDPVWSPQGDLI 361
           S +     +    SP  D +
Sbjct: 736 STNMSRRLWQAWVSPGIDYV 755



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 68/229 (29%), Gaps = 44/229 (19%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---------------- 275
           D+  +  V   + R  +  +      + + +  FS +G+R + +                
Sbjct: 106 DNGPLRSVLEDNYRALKIIETSFQPPNAVTSVAFSRDGRRIVAADDLGVSVWNAESGGAI 165

Query: 276 -------------VQKDEAMDIYSVDLQSNATERLTNTLFIN------ISASYSPDSSQI 316
                        V  D    +  +       +  T     +         ++SPD+S+I
Sbjct: 166 GERAHLDGVRTAVVSPDGTRAVAILRNTGQVLDAETGHPIGDPLKLNGAEVAFSPDNSRI 225

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                  G  Q++ + +  +  K ++   +       +SP G  I           + V 
Sbjct: 226 A-CGGNNGTIQIWDLNTGRTVGKPLA-GHQGPVIALAFSPDGRRIISGSADQT---VRVW 280

Query: 377 KKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                Q         ++ +  +SP G  +      + D   +L+  D  
Sbjct: 281 DAATGQPIGQQTTGGSVLSVAFSPDGTRIA---SANSDGTIQLWDADAT 326


>gi|75908842|ref|YP_323138.1| Fis family transcriptional regulator [Anabaena variabilis ATCC 29413]
 gi|75702567|gb|ABA22243.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 1221

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 104/300 (34%), Gaps = 40/300 (13%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              +LWDV   K +  K                  +++       G          +++ S
Sbjct: 749  HIKLWDVATGKCL--KTLKGHTK-----------EVHSVSFSPDG----------QTLAS 785

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                +++ + D        +     + ++  RFSP+ + +A    D      V L D + 
Sbjct: 786  SGEDSTVRLWDVKTGQCGQIFEGHSKKVYSVRFSPDGETLASCGEDR----SVKLWDIQR 841

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI- 305
                  +    S + A  FS +G+   IS   D+   ++  D+ +  +  +      ++ 
Sbjct: 842  GECTNTLWGHSSQVWAIAFSPDGRTL-ISCSDDQTARLW--DVITGNSLNILRGYTRDVY 898

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S ++SPDS  +   S R+    + +   N  +   + +  +       + P G ++A   
Sbjct: 899  SVAFSPDSQILA--SGRD-DYTIGLWNLNTGECHPL-RGHQGRIRSVAFHPDGQILASGS 954

Query: 366  FSGEKFAIGVMKKDGSQ-ERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                     +   + S+  R L   +N      +SP   +L  S +   D   +L+  D 
Sbjct: 955  ADNTIKLWDISDTNHSRCIRTLTGHTNWVWTVVFSPDKHTLASSSE---DRTIRLWDKDT 1011



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 86/241 (35%), Gaps = 19/241 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G++   + +          +       ++   FSP+ + +A  + D      + L D  
Sbjct: 613 TGLMNGEIRLWQTTDNKQLRIYKGHTAWVWAFAFSPDSRMLASGSADS----TIKLWDVH 668

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                K +    + + +  FS +G R L S  +D  + ++  D+ +   ++ L       
Sbjct: 669 TGECLKTLSKNANKVYSVAFSPDG-RILASAGQDHTIKLW--DIATGNCQQTLPGHDDWV 725

Query: 305 ISASYSP--DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            S ++SP  D   ++  S     + + +         +  +          +SP G  +A
Sbjct: 726 WSVTFSPVTDDKPLLLASS-SADQHIKLWDVATGKCLKTLKGHTKEVHSVSFSPDGQTLA 784

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               SGE   + +      Q   + E  +  + +  +SP G +L        D   KL+ 
Sbjct: 785 ---SSGEDSTVRLWDVKTGQCGQIFEGHSKKVYSVRFSPDGETLA---SCGEDRSVKLWD 838

Query: 421 I 421
           I
Sbjct: 839 I 839



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 52/330 (15%), Positives = 107/330 (32%), Gaps = 55/330 (16%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ +    +   V  RLWDVK  +                        I++         
Sbjct: 780  GQTLASSGEDSTV--RLWDVKTGQ---------------------CGQIFE--------G 808

Query: 174  NSRILFVSESVVSGII------KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            +S+ ++       G          S+ + D                ++   FSP+ + + 
Sbjct: 809  HSKKVYSVRFSPDGETLASCGEDRSVKLWDIQRGECTNTLWGHSSQVWAIAFSPDGRTLI 868

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D        L D     +   +  +   + +  FS +  + L S + D  + ++  
Sbjct: 869  SCSDDQ----TARLWDVITGNSLNILRGYTRDVYSVAFSPD-SQILASGRDDYTIGLW-- 921

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKE 346
            +L +     L        S ++ PD   +   S  +   +L+ +  +N S   R      
Sbjct: 922  NLNTGECHPLRGHQGRIRSVAFHPDGQILASGS-ADNTIKLWDISDTNHSRCIRTLTGHT 980

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSL 404
               +  V+SP    +A +    E   I +  KD     ++L      +    +SP GR+L
Sbjct: 981  NWVWTVVFSPDKHTLASSS---EDRTIRLWDKDTGDCLQKLKGHSHWVWTVAFSPDGRTL 1037

Query: 405  IFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                    D+  K++ +  +G     +  P
Sbjct: 1038 A---SGSADSEIKIWDV-ASGECLQTLTDP 1063



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 112/332 (33%), Gaps = 43/332 (12%)

Query: 119  EGKDRLRVEF------RLWDVKDRKQI-IGKKFFSSPASW------RKIAHTISDDIY-- 163
                R  +        RLWDV     + I + +     S       + +A    D     
Sbjct: 861  SPDGRTLISCSDDQTARLWDVITGNSLNILRGYTRDVYSVAFSPDSQILASGRDDYTIGL 920

Query: 164  --------QSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDR---DGANIRYLTPSRD 211
                      + G +G   S        +  SG   N++ + D    + +          
Sbjct: 921  WNLNTGECHPLRGHQGRIRSVAFHPDGQILASGSADNTIKLWDISDTNHSRCIRTLTGHT 980

Query: 212  QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++   FSP++  +A ++ D      + L D       +++      +    FS +G+ 
Sbjct: 981  NWVWTVVFSPDKHTLASSSEDR----TIRLWDKDTGDCLQKLKGHSHWVWTVAFSPDGRT 1036

Query: 272  ALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
               S   D  + I+  D+ S    + LT+ L +  S ++S D + +   S+    + + +
Sbjct: 1037 LA-SGSADSEIKIW--DVASGECLQTLTDPLGMIWSVAFSLDGALLASASE---DQTVKL 1090

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-ED 389
                  +        +   +   +SP G ++A +        +  + K    + L     
Sbjct: 1091 WNLKTGECVHTLTGHDKQVYSVAFSPNGQILA-SGSEDTTVKLWDISKGSCIDTLKHGHT 1149

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + +++  +SP GR L        D   +L+ +
Sbjct: 1150 AAIRSVAFSPDGRLLA---SGSEDEKIQLWDM 1178



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 78/210 (37%), Gaps = 21/210 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           RFSP+ +  A    + E    + L  T  ++  +      + + A  FS + +    S  
Sbjct: 603 RFSPDGKYFATGLMNGE----IRLWQTTDNKQLRIYKGHTAWVWAFAFSPDSRMLA-SGS 657

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNG 335
            D  + ++  D+ +    + L+       S ++SPD   +       G++  + +     
Sbjct: 658 ADSTIKLW--DVHTGECLKTLSKNANKVYSVAFSPDGRILA----SAGQDHTIKLWDIAT 711

Query: 336 SDQKRISQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSN 391
            + ++     +   +   +SP      +     S ++  I +      +  + L      
Sbjct: 712 GNCQQTLPGHDDWVWSVTFSPVTDDKPLLLASSSADQ-HIKLWDVATGKCLKTLKGHTKE 770

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + + ++SP G++L        D+  +L+ +
Sbjct: 771 VHSVSFSPDGQTLA---SSGEDSTVRLWDV 797



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 68/209 (32%), Gaps = 14/209 (6%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   +       +++     +    D          S +++ RFS +GK    +   +  
Sbjct: 561 DFSGLTIWQAYFKEVKLRETIFANSDLTGSVFTETMSSVVSVRFSPDGKYFA-TGLMNGE 619

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + ++     +              + ++SPDS  +   S       + +   +  +  + 
Sbjct: 620 IRLWQT-TDNKQLRIYKGHTAWVWAFAFSPDSRMLASGS---ADSTIKLWDVHTGECLKT 675

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSP 399
                   +   +SP G ++A    +G+   I +        +  +   +    +  +SP
Sbjct: 676 LSKNANKVYSVAFSPDGRILA---SAGQDHTIKLWDIATGNCQQTLPGHDDWVWSVTFSP 732

Query: 400 --SGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               + L+ +     D   KL+ +   G+
Sbjct: 733 VTDDKPLLLASS-SADQHIKLWDV-ATGK 759



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 57/147 (38%), Gaps = 13/147 (8%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T T+   +S  +SPD           G  ++ + Q+  + Q RI +   A  +   +SP 
Sbjct: 593 TETMSSVVSVRFSPDGKYFA-TGLMNG--EIRLWQTTDNKQLRIYKGHTAWVWAFAFSPD 649

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGS 416
             ++A +  +     +  +   G   + L +++N + +  +SP GR L        D   
Sbjct: 650 SRMLA-SGSADSTIKLWDVHT-GECLKTLSKNANKVYSVAFSPDGRILA---SAGQDHTI 704

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWV 443
           KL+ I      +TL     +     W 
Sbjct: 705 KLWDIATGNCQQTLPGHDDWV----WS 727


>gi|119511037|ref|ZP_01630157.1| WD-40 repeat protein [Nodularia spumigena CCY9414]
 gi|119464288|gb|EAW45205.1| WD-40 repeat protein [Nodularia spumigena CCY9414]
          Length = 872

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 101/326 (30%), Gaps = 39/326 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+++  G     +  +LW V   K+I                H  SD +        G  
Sbjct: 394 GQILASGSGDETI--KLWSVSTGKEIRTLT-----------GH--SDYVNFVAFSHDGQI 438

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                       SG    ++ +         Y   + D  +    FS + Q +A  + D+
Sbjct: 439 L----------ASGSGDETIKLWSVSTGKEIYTFTAHDDSVNSVAFSHDGQILASGSDDN 488

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L      R  +        I    FS +G + L S   D  + ++SV   +  
Sbjct: 489 ----TIKLWSVSTGREIRTFTAHDDYINCVAFSHDG-QILASGSYDNTIKLWSV--STGR 541

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             R  +      S ++S D   +   SD      + +   +   +       + S     
Sbjct: 542 EIRTFSHDDSVKSVAFSHDGQILASSSD---DNTIKLWSVSTGTEIYTLTGHDYSVKSVA 598

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +S  G ++A +     K  + ++        L    S++ +  +S  G+ L         
Sbjct: 599 FSHDGQILA-SGSGDNKIKLWLVSTGREILTLTGHSSSVNSVAFSHDGKILASGSD---S 654

Query: 414 TGSKLYSIDLNGRNETLINTPAYASD 439
              KL+S+       TL    +  + 
Sbjct: 655 KTIKLWSVSTGTEIYTLTGHSSSVNS 680



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 81/247 (32%), Gaps = 14/247 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +                  +    FS + Q +A  + D+     + L    
Sbjct: 357 SGSEDKTIKLWSVSTGREICTLLGHSSSVNCVAFSHDGQILASGSGDE----TIKLWSVS 412

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  + +      +    FS +G + L S   DE + ++SV          T       
Sbjct: 413 TGKEIRTLTGHSDYVNFVAFSHDG-QILASGSGDETIKLWSVS-TGKEIYTFTAHDDSVN 470

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++S D   +   SD      + +   +   + R     +       +S  G ++A   
Sbjct: 471 SVAFSHDGQILASGSD---DNTIKLWSVSTGREIRTFTAHDDYINCVAFSHDGQILASGS 527

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +      +  +   G + R    D ++++  +S  G+ L  S     D   KL+S+    
Sbjct: 528 YDNT-IKLWSVST-GREIRTFSHDDSVKSVAFSHDGQILASSSD---DNTIKLWSVSTGT 582

Query: 426 RNETLIN 432
              TL  
Sbjct: 583 EIYTLTG 589



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 97/300 (32%), Gaps = 37/300 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+++  G    ++  +LW V   ++I+     SS  +    +H                 
Sbjct: 603 GQILASGSGDNKI--KLWLVSTGREILTLTGHSSSVNSVAFSH----------------- 643

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +IL       SG    ++ +         Y        +    FS + + +A  + D 
Sbjct: 644 DGKIL------ASGSDSKTIKLWSVSTGTEIYTLTGHSSSVNSVAFSHDGKILASGSDDK 697

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L           +    S + +  FSS+G + L S    + + ++SV      
Sbjct: 698 ----TIKLWSVSTGTEICTLTGHSSWVYSVAFSSDG-QILASGSFYKTIKLWSVS-TGKK 751

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              LT       S ++S D   +   SD    + + +       +               
Sbjct: 752 IYTLTGHSSWVYSVAFSGDGQILASGSD---DKTIKLWSLTTGKEIYTLTGHSKGVNFVA 808

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +S  G ++A +  S +   +  M   G +   L     + +  +SP    L  +  + G+
Sbjct: 809 FSSDGQILA-SGSSDKTIKLWSM-TTGKEIYTLNHLDQVLSVAFSPDAGWLA-AGDRRGN 865



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 72/217 (33%), Gaps = 33/217 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+++  G D   +  +LW V    +I                H  S  +Y       G  
Sbjct: 687 GKILASGSDDKTI--KLWSVSTGTEICTLT-----------GH--SSWVYSVAFSSDGQI 731

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                       SG    ++ +         Y        ++   FS + Q +A  + D 
Sbjct: 732 L----------ASGSFYKTIKLWSVSTGKKIYTLTGHSSWVYSVAFSGDGQILASGSDDK 781

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L      +    +      +    FSS+G + L S   D+ + ++S+   +  
Sbjct: 782 ----TIKLWSLTTGKEIYTLTGHSKGVNFVAFSSDG-QILASGSSDKTIKLWSM--TTGK 834

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                N L   +S ++SPD+  +    DR G  +++ 
Sbjct: 835 EIYTLNHLDQVLSVAFSPDAGWLA-AGDRRGNIKIWR 870



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 48/165 (29%), Gaps = 27/165 (16%)

Query: 290 QSNATERLTNTLFINISASY---------------SPDSSQIVFESDREGKEQLYVMQSN 334
               ++ +T+    +   S+               SP    +   +       ++++ + 
Sbjct: 273 AGIKSQPVTSHP--HTPPSWECVHIIPSISGIIALSPKGDMLASVAYST----IHLLSAT 326

Query: 335 GSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                      +         +S  G ++A +    +   +  +        LL   S++
Sbjct: 327 TGKLICTLTGHDYILPVESVAFSHDGQILA-SGSEDKTIKLWSVSTGREICTLLGHSSSV 385

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               +S  G+ L       GD   KL+S+       TL     Y 
Sbjct: 386 NCVAFSHDGQILA---SGSGDETIKLWSVSTGKEIRTLTGHSDYV 427


>gi|291451256|ref|ZP_06590646.1| protease [Streptomyces albus J1074]
 gi|291354205|gb|EFE81107.1| protease [Streptomyces albus J1074]
          Length = 1090

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 67/190 (35%), Gaps = 19/190 (10%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+      + D    ++   L      R++          +SPD + + + S R+G  ++
Sbjct: 14  GELVAFVAEDD----VWVAPLDGGRAWRVSADNMPVDHPRFSPDGTTVAWTSTRDGAPEV 69

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL 385
           +V  ++G   +R++           W+P G+++A T +            +  DG     
Sbjct: 70  HVAPTDGGPSRRLTHWGSKRTSVRGWTPGGEVLALTTYGEASLRRSWARAVPLDGGPAPA 129

Query: 386 LVEDSNLQAPTWSPSGRSL----------IFSRKKDGDTGSKLYSIDLNGRNETL-INTP 434
           L     +    + P G+ L           + ++  G T  KL++    G    L     
Sbjct: 130 LPFGP-VGGVAYGPDGQVLLGSVSMGREAAWWKRYRGGTAGKLWTGTEGGEFTRLHAGLD 188

Query: 435 AYASDPQWVG 444
                P WVG
Sbjct: 189 GNIEYPLWVG 198



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 95/269 (35%), Gaps = 35/269 (13%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R   V   +V+ + ++ + V   DG    +   + +  +  PRFSP+   VA+ +  D  
Sbjct: 8   RFPHVHGELVAFVAEDDVWVAPLDGGRA-WRVSADNMPVDHPRFSPDGTTVAWTSTRDG- 65

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKD---EAMDIYSVDLQS 291
              V++  T      +R+ ++ S   + R ++  G+   ++   +         +V L  
Sbjct: 66  APEVHVAPTD-GGPSRRLTHWGSKRTSVRGWTPGGEVLALTTYGEASLRRSWARAVPLDG 124

Query: 292 NATERLTNTLFINISASYSPDSS-----------QIVFESDREGKEQLYVMQSNGSDQKR 340
                L       +  +Y PD                ++  R G        + G +  R
Sbjct: 125 GPAPALPFGPVGGV--AYGPDGQVLLGSVSMGREAAWWKRYRGGTAGKLWTGTEGGEFTR 182

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW- 397
           +    + +   P+W   GD IAF        A+     DG+  R      D +   P + 
Sbjct: 183 LHAGLDGNIEYPLWV--GDRIAFLSDHEGVGALYSSLPDGTDLRRHTPLTDPDTGLPAFY 240

Query: 398 ----SPSGRSLIFSRKKDGDTGSKLYSID 422
               +  G  ++++         +L+ +D
Sbjct: 241 ARHAATDGTRVVYTA------AGRLWVLD 263



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 79/234 (33%), Gaps = 31/234 (13%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + VA+   DD     V++      RA  R+      +  PRFS +G     +  +D A 
Sbjct: 14  GELVAFVAEDD-----VWVAPLDGGRAW-RVSADNMPVDHPRFSPDGTTVAWTSTRDGAP 67

Query: 283 DIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQ---LYVMQSNGSDQ 338
           +++        + RLT+      S   ++P    +   +  E   +      +  +G   
Sbjct: 68  EVHVAPTDGGPSRRLTHWGSKRTSVRGWTPGGEVLALTTYGEASLRRSWARAVPLDGGPA 127

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---------- 388
             +            + P G ++  +   G + A     + G+  +L             
Sbjct: 128 PALPFGPVGGV---AYGPDGQVLLGSVSMGREAAWWKRYRGGTAGKLWTGTEGGEFTRLH 184

Query: 389 ---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
              D N++ P W   G  + F    +G     LYS   +G +    +TP    D
Sbjct: 185 AGLDGNIEYPLWV--GDRIAFLSDHEG--VGALYSSLPDGTDLRR-HTPLTDPD 233



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 75/252 (29%), Gaps = 26/252 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-IL 261
            R + P RD     P  +     V         +       T      + +     +   
Sbjct: 293 PRPVEPGRDLGGASPDHTGRGSAVT--------VRGAVHWVTHRSGPARLLSGEPGVRHR 344

Query: 262 APR-FSSNGK-RALISVQKDEAMDIYSVDL----QSNATERLTNT-LFINISASYSPDSS 314
            PR F  +G+         +    +           +   R+    L   +    +PD S
Sbjct: 345 LPRTFRVDGEEYVAWVTDAEGEDALEFAPATGTAAGSTPRRIAAGQLGRVLQLRMAPDGS 404

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +    S      ++ ++     + + + + ++      V+SP    +A++    E     
Sbjct: 405 RAAVASH---DGRVLLVDRETGEVREVDRSEDGDATGLVFSPDSSWLAWSHPGPEPLR-Q 460

Query: 375 VMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID---LNGRNE 428
           +   + +   +        N  +P ++  G+ L F  ++  D     +  D   L+    
Sbjct: 461 LKLANTTDLTVSEATPLRFNDHSPAFTLDGKHLAFLSERSFDPVYDDHVFDLAFLDSSRP 520

Query: 429 TLINTPAYASDP 440
            LI   A    P
Sbjct: 521 HLITLAATTPSP 532



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 58/158 (36%), Gaps = 11/158 (6%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           + D    + +V+++     ++ +       G+  R +   +   + + R +P+  + A A
Sbjct: 350 RVDGEEYVAWVTDAEGEDALEFAPATGTAAGSTPRRIAAGQLGRVLQLRMAPDGSRAAVA 409

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD----IY 285
           ++D     RV L+D       +   +         FS +      S    E +       
Sbjct: 410 SHDG----RVLLVDRETGEVREVDRSEDGDATGLVFSPDSSWLAWSHPGPEPLRQLKLAN 465

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           + DL  +    L    F + S +++ D   + F S+R 
Sbjct: 466 TTDLTVSEATPL---RFNDHSPAFTLDGKHLAFLSERS 500


>gi|281410807|gb|ADA68816.1| HET-R [Podospora anserina]
          Length = 252

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 80/227 (35%), Gaps = 16/227 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG    ++ + D             +  ++   FSP+ Q++A    DD     V +
Sbjct: 18  QRLASGAGDRTVKIWDPASGQCFQTLEGHNGSVYSVAFSPDGQRLASGADDD----TVKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +  + +   R  + +  FS++G+R   S   D+ + I+         + L    
Sbjct: 74  WDPASGQCLQTLEGHRGSVSSVAFSADGQRLA-SGAGDDTVKIWD-PASGQCLQTLEGHR 131

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               S ++S D  ++   + DR     + +         +  +    S     +S  G  
Sbjct: 132 GSVSSVAFSADGQRLASGAVDRT----VKIWDPASGQCLQTLEGHRGSVSSVAFSADGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
           +A +   G+   I        Q    +E    ++ +  +SP G+   
Sbjct: 188 LA-SGAGGDTVKIW--DPASGQCLQTLEGHRGSVHSVAFSPDGQRFA 231



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 68/210 (32%), Gaps = 16/210 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  ++   FS + Q++A    D      V + D    +  + +      + +  FS
Sbjct: 1   LEGHNGSVYSVAFSADGQRLASGAGDR----TVKIWDPASGQCFQTLEGHNGSVYSVAFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+R   S   D+ + I+         + L        S ++S D  ++       G +
Sbjct: 57  PDGQRLA-SGADDDTVKIWD-PASGQCLQTLEGHRGSVSSVAFSADGQRLA---SGAGDD 111

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +         +  +    S     +S  G  +A          + +      Q    
Sbjct: 112 TVKIWDPASGQCLQTLEGHRGSVSSVAFSADGQRLASGAVDRT---VKIWDPASGQCLQT 168

Query: 387 VED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
           +E    ++ +  +S  G+ L       GDT
Sbjct: 169 LEGHRGSVSSVAFSADGQRLA--SGAGGDT 196


>gi|309791519|ref|ZP_07686021.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Oscillochloris trichoides DG6]
 gi|308226444|gb|EFO80170.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Oscillochloris trichoides DG6]
          Length = 629

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 74/242 (30%), Gaps = 35/242 (14%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + D    R++        A   +        AP  S +G+  +          +  V 
Sbjct: 87  VFFVDGGSGRIWRQSIAGGSAT-PVTPAFGHAAAPAISPDGRWLIYVHSDAGVDCLAVVP 145

Query: 289 LQSNA-TERLTNTLFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSD-- 337
              +   +RL       +   + P   Q+ + +        D  G   LY+     S+  
Sbjct: 146 ADGSQWPQRLIAGHDFFMQPCWHPSGKQVAYVAWDFPNMPWDGSG---LYLADLEVSERM 202

Query: 338 -----QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-N 391
                   I+   E + F P ++P G  +A+         + V   + +    +      
Sbjct: 203 PVARMPNLIAGGTEVAIFQPCFAPDGRYLAYVSDESGWGHVYVRDLEQNHVHQISSGEVE 262

Query: 392 LQAP---------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
              P         +WS   R +   R + G    ++ S  L+G +   +   A     QW
Sbjct: 263 HGHPAWIQGMRNLSWSSDSRRIYALRSQHG--LVEMCSYGLDGSSVEQVQLGADY---QW 317

Query: 443 VG 444
           +G
Sbjct: 318 LG 319



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 79/246 (32%), Gaps = 26/246 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP------RFSSNGKRA 272
           +  + Q V +        + V   +     AP+ +      + A        F       
Sbjct: 29  WDSDGQHVVWLEGRGGRGVLV-CAEVGSADAPRDLTPTEFSVRAKIGYGGGDFCVGHGTV 87

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                   +  I+   +   +   +T       + + SPD   +++     G + L V+ 
Sbjct: 88  FFV--DGGSGRIWRQSIAGGSATPVTPAFGHAAAPAISPDGRWLIYVHSDAGVDCLAVVP 145

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVMKKDGSQERLLV 387
           ++GS   +        +  P W P G  +A+  +           + +   + S+   + 
Sbjct: 146 ADGSQWPQRLIAGHDFFMQPCWHPSGKQVAYVAWDFPNMPWDGSGLYLADLEVSERMPVA 205

Query: 388 EDSNLQA---------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYA 437
              NL A         P ++P GR L +   + G     +Y  DL   +   I++     
Sbjct: 206 RMPNLIAGGTEVAIFQPCFAPDGRYLAYVSDESG--WGHVYVRDLEQNHVHQISSGEVEH 263

Query: 438 SDPQWV 443
             P W+
Sbjct: 264 GHPAWI 269



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 72/229 (31%), Gaps = 23/229 (10%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 +      G +   +TP+       P  SP+ + + Y   D   +  + ++    
Sbjct: 91  DGGSGRIWRQSIAGGSATPVTPAFGHAA-APAISPDGRWLIYVHSDAG-VDCLAVVPADG 148

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQ-----KDEAMDIYSVDLQSNA---TERLT 298
            + P+R+       + P +  +GK+             +   +Y  DL+ +      R+ 
Sbjct: 149 SQWPQRLIAGHDFFMQPCWHPSGKQVAYVAWDFPNMPWDGSGLYLADLEVSERMPVARMP 208

Query: 299 NTLFINIS-----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE------- 346
           N +            ++PD   + + SD  G   +YV     +   +IS  +        
Sbjct: 209 NLIAGGTEVAIFQPCFAPDGRYLAYVSDESGWGHVYVRDLEQNHVHQISSGEVEHGHPAW 268

Query: 347 -ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                +  WS     I   +       +     DGS    +   ++ Q 
Sbjct: 269 IQGMRNLSWSSDSRRIYALRSQHGLVEMCSYGLDGSSVEQVQLGADYQW 317



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 75/191 (39%), Gaps = 21/191 (10%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRID- 247
           L V+  DG+       +      +P + P+ ++VAY  +D      D   +YL D  +  
Sbjct: 141 LAVVPADGSQWPQRLIAGHDFFMQPCWHPSGKQVAYVAWDFPNMPWDGSGLYLADLEVSE 200

Query: 248 -----RAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                R P  I     + I  P F+ +G+       +     +Y  DL+ N   ++++  
Sbjct: 201 RMPVARMPNLIAGGTEVAIFQPCFAPDGRYLAYVSDESGWGHVYVRDLEQNHVHQISSGE 260

Query: 302 FINISA---------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FD 351
             +            S+S DS +I     + G  ++     +GS  +++    +  +   
Sbjct: 261 VEHGHPAWIQGMRNLSWSSDSRRIYALRSQHGLVEMCSYGLDGSSVEQVQLGADYQWLGQ 320

Query: 352 PVWSPQGDLIA 362
           P  +P+GD +A
Sbjct: 321 PSTNPKGDGVA 331



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 42/141 (29%), Gaps = 5/141 (3%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--- 365
           +  D   +V+   R G+  L   +   +D  R     E S    +    GD         
Sbjct: 29  WDSDGQHVVWLEGRGGRGVLVCAEVGSADAPRDLTPTEFSVRAKIGYGGGDFCVGHGTVF 88

Query: 366 -FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              G    I      G     +     +  AP  SP GR LI+     G     +   D 
Sbjct: 89  FVDGGSGRIWRQSIAGGSATPVTPAFGHAAAPAISPDGRWLIYVHSDAGVDCLAVVPADG 148

Query: 424 NGRNETLINTPAYASDPQWVG 444
           +   + LI    +   P W  
Sbjct: 149 SQWPQRLIAGHDFFMQPCWHP 169


>gi|242811032|ref|XP_002485707.1| acylamino-acid-releasing enzyme, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218716332|gb|EED15754.1| acylamino-acid-releasing enzyme, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 729

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 67/179 (37%), Gaps = 35/179 (19%)

Query: 265 FSSNGKRALISVQ-----KDEAMDIYSVDLQSNAT----ERLTNTLFINISASYSPDSSQ 315
            S +    L S +     +     + ++ L S        +LT  LF + + ++SPD + 
Sbjct: 83  LSPDRSSVLYSTELSWGHRKGKHPVSTIWLASTGRADSSRQLTRGLFRDYAPAWSPDGNA 142

Query: 316 IVFESDR---EGKEQLYVMQS-NGSDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFS--- 367
           + F SDR     K  +Y++    G +   I+ +  AS      +SP G  IAF       
Sbjct: 143 VAFVSDRADAGSKWAIYLLSLQEGCEAYPITPETSASPIEAFAFSPDGSRIAFLSADEDI 202

Query: 368 ---------------GEKF---AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                          GE +    + V+     Q R    D ++ +  WSP G  + FS 
Sbjct: 203 QLASAGDGPPDVQPWGETWRFARLRVVDLRTKQVRCAKLDRHVTSVCWSPDGTRIGFSS 261



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 64/203 (31%), Gaps = 33/203 (16%)

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES---VVSGIIKNSLCVMDRDGANIR 204
           P++      ++ D           D +S +     S          +++ +     A+  
Sbjct: 62  PSAHEHFIQSLCDLQVPKTLQLSPDRSSVLYSTELSWGHRKGKHPVSTIWLASTGRADSS 121

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATY--DDEDILRVYLMDTRID--RAPKRIGNFRSMI 260
                     + P +SP+   VA+ +   D      +YL+  +      P       S I
Sbjct: 122 RQLTRGLFRDYAPAWSPDGNAVAFVSDRADAGSKWAIYLLSLQEGCEAYPITPETSASPI 181

Query: 261 LAPRFSSNGKRALI---------SVQKDEAMD------------IYSVDLQSNATE--RL 297
            A  FS +G R            +   D   D            +  VDL++      +L
Sbjct: 182 EAFAFSPDGSRIAFLSADEDIQLASAGDGPPDVQPWGETWRFARLRVVDLRTKQVRCAKL 241

Query: 298 TNTLFINISASYSPDSSQIVFES 320
              +    S  +SPD ++I F S
Sbjct: 242 DRHV---TSVCWSPDGTRIGFSS 261


>gi|117165248|emb|CAJ88807.1| putative WD-repeat containing protein [Streptomyces ambofaciens ATCC
            23877]
          Length = 1418

 Score = 84.3 bits (207), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 57/325 (17%), Positives = 100/325 (30%), Gaps = 55/325 (16%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     RLWDV+  + +      S+              ++       G        
Sbjct: 937  ATGASDATIRLWDVRRHRFLAALTGHSTT-------------VFALAFSPDG-------- 975

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
               ++ SG    S  + D        +       +    FSP+   +A  + D     RV
Sbjct: 976  --RTLASGGQDRSARLWDVRERTALVVLNGHTGYVNALAFSPDGSTLASGSAD----ARV 1029

Query: 240  YLMDTRIDRAPKRIGNFRSMIL-------APRFSSNGKRALISVQKDEAMDIYSVDLQS- 291
             L D R+ R    I      +           +S +GK   +    D +  +   D ++ 
Sbjct: 1030 RLWDMRVGRPRATITGSNGSVSQTVVSRPQAVYSPDGKVLAV---GDNSGTVRLYDARTR 1086

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASY 349
                RLT       S  +SPDS  +   S       L+    +    +R++     E   
Sbjct: 1087 RTLGRLTGHRSKVSSLRFSPDSRFVAASSHDSSLVMLW----DARTHRRLATLDGHERPV 1142

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR 408
                +SP    +A + F      +  +       R L   D+      +SP GR+L+   
Sbjct: 1143 QSVAFSPDARTLATSSFIDGTTRLWSVPT----HRQLASIDAGAGWARFSPDGRTLV--- 1195

Query: 409  KKDGDTGSKLYSIDLNGRNETLINT 433
               G   S +  +D+  R    + T
Sbjct: 1196 -TSGFQSSSMQLVDV--RTHRRLGT 1217



 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 67/336 (19%), Positives = 121/336 (36%), Gaps = 42/336 (12%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                 R E  LWD + R++I   +   S            D    S      D  +  + 
Sbjct: 841  ATSGRRGEVLLWDARTRQRIDVLQVVDSD-----------DTALPSRLAFSPDGRTLAVT 889

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            +S  V S   K ++ + D        +       +    FSP+   +A    D      +
Sbjct: 890  LSNFVSSEREKAAVQLWDVRERRRTAMLKGHTGQVASLAFSPDGATLATGASDA----TI 945

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             L D R  R    +    + + A  FS +G+    S  +D +  ++ V  ++ A   L  
Sbjct: 946  RLWDVRRHRFLAALTGHSTTVFALAFSPDGRTLA-SGGQDRSARLWDVRERT-ALVVLNG 1003

Query: 300  TLFINISASYSPDSSQIVFES---------DREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                  + ++SPD S +   S          R G+ +  +  SNGS  + +    +A   
Sbjct: 1004 HTGYVNALAFSPDGSTLASGSADARVRLWDMRVGRPRATITGSNGSVSQTVVSRPQA--- 1060

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              V+SP G ++A    SG    +   +   +  RL    S + +  +SP  R +  S   
Sbjct: 1061 --VYSPDGKVLAVGDNSGTV-RLYDARTRRTLGRLTGHRSKVSSLRFSPDSRFVAASSHD 1117

Query: 411  -------DGDTGSKLYSIDLNGRNETLINTPAYASD 439
                   D  T  +L ++D +   E  + + A++ D
Sbjct: 1118 SSLVMLWDARTHRRLATLDGH---ERPVQSVAFSPD 1150



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 101/311 (32%), Gaps = 44/311 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+V+  G +   V  RL+D + R+ +            R   H         ++  +   
Sbjct: 1066 GKVLAVGDNSGTV--RLYDARTRRTLG-----------RLTGHR------SKVSSLRFSP 1106

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +SR +  S    S      + + D             ++ +    FSP+ + +A +++ D
Sbjct: 1107 DSRFVAASSHDSS-----LVMLWDARTHRRLATLDGHERPVQSVAFSPDARTLATSSFID 1161

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                             +++ +  +     RFS +G+  + S  +  +M +    +    
Sbjct: 1162 G------TTRLWSVPTHRQLASIDAGAGWARFSPDGRTLVTSGFQSSSMQL----VDVRT 1211

Query: 294  TERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              RL     I+    S ++SPD + +   S   G  +L +                    
Sbjct: 1212 HRRLGTLDAIDKSIHSVTFSPDGNTLALAS---GNGRLRLWDLGRRSLTATLVGHTDKVQ 1268

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               ++P G  +  +        +  ++       L      + +   SP G++L      
Sbjct: 1269 SVSFTPDGTTLV-SSDDAGAVMVWDVRTHRRLTTLTGHTGVVWSAVVSPDGKTLA---TA 1324

Query: 411  DGDTGSKLYSI 421
              D   +L+ I
Sbjct: 1325 GDDRVIRLWDI 1335



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 49/271 (18%), Positives = 94/271 (34%), Gaps = 23/271 (8%)

Query: 178  LFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDED 235
            ++  +  V  +  NS  V   D    R L         +   RFSP+ + VA +++D   
Sbjct: 1061 VYSPDGKVLAVGDNSGTVRLYDARTRRTLGRLTGHRSKVSSLRFSPDSRFVAASSHDSS- 1119

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
               V L D R  R    +      + +  FS + +    S   D    ++SV        
Sbjct: 1120 --LVMLWDARTHRRLATLDGHERPVQSVAFSPDARTLATSSFIDGTTRLWSVP----THR 1173

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPV 353
            +L +       A +SPD   +V    +    QL     +    +R+      + S     
Sbjct: 1174 QLASIDAGAGWARFSPDGRTLVTSGFQSSSMQL----VDVRTHRRLGTLDAIDKSIHSVT 1229

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            +SP G+ +A       +  +  + +      L+     +Q+ +++P G +L+     D  
Sbjct: 1230 FSPDGNTLALAS-GNGRLRLWDLGRRSLTATLVGHTDKVQSVSFTPDGTTLV---SSDDA 1285

Query: 414  TGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                ++ +  + R  TL           W  
Sbjct: 1286 GAVMVWDVRTHRRLTTLTGHTGVV----WSA 1312



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 95/292 (32%), Gaps = 31/292 (10%)

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
           ++   +P +  ++  T+S  +  ++TG     +S         +      +  + D  G 
Sbjct: 720 QRVSPTPETRAQLLSTVSAPLRTTLTGHTTGVSSVDFSPDGKTLVTGGSGTARLWDMTGR 779

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
                   R   +    FSP+ + +            V L D       KR G       
Sbjct: 780 RQPTSLGGRSGQIDTAHFSPDGRTLL-------TGPEVQLWDVHT---RKRTGALAGADR 829

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-------TNTLFINISASYSPDSS 314
              FS +G     S ++ E      +   +   +R+       ++   +    ++SPD  
Sbjct: 830 PAVFSPDGDMIATSGRRGE-----VLLWDARTRQRIDVLQVVDSDDTALPSRLAFSPDGR 884

Query: 315 QIV-----FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +      F S    K  + +       +  + +          +SP G  +A T  S  
Sbjct: 885 TLAVTLSNFVSSEREKAAVQLWDVRERRRTAMLKGHTGQVASLAFSPDGATLA-TGASDA 943

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +  +++      L    + + A  +SP GR+L        D  ++L+ +
Sbjct: 944 TIRLWDVRRHRFLAALTGHSTTVFALAFSPDGRTLA---SGGQDRSARLWDV 992



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 70/215 (32%), Gaps = 20/215 (9%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R  L+ T        +    + + +  FS +GK  +          ++ +  +      L
Sbjct: 729 RAQLLSTVSAPLRTTLTGHTTGVSSVDFSPDGKTLV--TGGSGTARLWDMTGR-RQPTSL 785

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +A +SPD   ++         ++ +   +   +   +     +    V+SP 
Sbjct: 786 GGRSGQIDTAHFSPDGRTLL------TGPEVQLWDVHTRKR---TGALAGADRPAVFSPD 836

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLI-----FSRK 409
           GD+IA +   GE        +       +V+  +   P+   +SP GR+L      F   
Sbjct: 837 GDMIATSGRRGEVLLWDARTRQRIDVLQVVDSDDTALPSRLAFSPDGRTLAVTLSNFVSS 896

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +      +L+ +    R   L       +   +  
Sbjct: 897 EREKAAVQLWDVRERRRTAMLKGHTGQVASLAFSP 931



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 82/258 (31%), Gaps = 42/258 (16%)

Query: 80   NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV-------EFRLWD 132
              ++  SF    T   S+P  +   S+ A     G        R  V         +L D
Sbjct: 1152 RTLATSSFIDGTTRLWSVPTHRQLASIDAGA---GWARFSPDGRTLVTSGFQSSSMQLVD 1208

Query: 133  VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
            V+  +++                  I   I+       G+        + ++ SG  +  
Sbjct: 1209 VRTHRRLGTL-------------DAIDKSIHSVTFSPDGN--------TLALASGNGRLR 1247

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            L  + R   ++          +    F+P+   +       +D   V + D R  R    
Sbjct: 1248 LWDLGR--RSLTATLVGHTDKVQSVSFTPDGTTLV----SSDDAGAVMVWDVRTHRRLTT 1301

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSP 311
            +     ++ +   S +GK         +   I   D+++   +        +  SA +SP
Sbjct: 1302 LTGHTGVVWSAVVSPDGKTLA---TAGDDRVIRLWDIETHRYSAMYAGHTGVVNSAFFSP 1358

Query: 312  DSSQIVFESDREGKEQLY 329
            D + +V  S  +   +L+
Sbjct: 1359 DGNTLV-TSSSDLTVRLW 1375


>gi|85708708|ref|ZP_01039774.1| protease, putative [Erythrobacter sp. NAP1]
 gi|85690242|gb|EAQ30245.1| protease, putative [Erythrobacter sp. NAP1]
          Length = 1106

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 76/227 (33%), Gaps = 19/227 (8%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V DR+    R L    +QI    R SP    +A          +V L      R  +   
Sbjct: 294 VTDREQTRPRTLDNPMEQIEAA-RVSPTGDAIAVTARG-----QVALASPLARRRVEFNV 347

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPD 312
              +          G    + + + +  D+  +D   +    +   N      S   SPD
Sbjct: 348 PDGARAREAVAGPEGDNLFLILDRGDTRDLVRMDADGSGEPNVIAANYDAHIWSFVVSPD 407

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSGE 369
              +V    R+   +L  +         +   +   + ++ + V+SP    IA+++   E
Sbjct: 408 GKTLV---VRDKLARLQKVDVESGAVTLLAQNTTGNDNAFVNIVFSPDSKFIAYSETGPE 464

Query: 370 KF----AIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
           +F     I V      +         N   P +SP G+ L F  +++
Sbjct: 465 QFSNTANIQVQNLSTGERVQASSGKFNDFVPAFSPDGKWLYFVSERN 511



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 60/165 (36%), Gaps = 19/165 (11%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   + + + D    I+          RLTN      +   SPD S + F +  +  + +
Sbjct: 37  GDVLVFASEGD----IWRASRDGGTAVRLTNHEGEERNLHISPDGSMVAFNAGYDSGDDI 92

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLL 386
           YVM   G    R++ +         W+P G +I  ++  G      +  +   G Q   +
Sbjct: 93  YVMPVAGGRPTRLTYEG-GGMTTVGWTPDGQVIFSSRLRGSGQGEVLHTIAATGGQPSAI 151

Query: 387 VEDSNLQAPTWSPSGRSL-----IFSRKKD------GDTGSKLYS 420
                  +  +   GR       +++R +D      G   ++L+S
Sbjct: 152 P-LWRANSAAYGSDGRFFFNRRGLYARARDNAVLYRGGGMAQLWS 195



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 62/209 (29%), Gaps = 27/209 (12%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              +R      R+ N          S +G     +   D   DIY + +      RLT  
Sbjct: 49  WRASRDGGTAVRLTNHEGEERNLHISPDGSMVAFNAGYDSGDDIYVMPVAGGRPTRLTYE 108

Query: 301 LFINISASYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                +  ++PD  Q++F S   G  Q   L+ + + G     I            +   
Sbjct: 109 GGGMTTVGWTPDG-QVIFSSRLRGSGQGEVLHTIAATGGQPSAI---PLWRANSAAYGSD 164

Query: 358 GDLI-------------AFTKFSGEKFAIG-VMKKDGSQERLLVEDSN--LQAPTWSPSG 401
           G                A     G    +   M     +   L+ D    ++ P     G
Sbjct: 165 GRFFFNRRGLYARARDNAVLYRGGGMAQLWSWMPGSTDEATQLLADFGAPIRMPMAH--G 222

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             + F   K G  G  ++S+  +G   T 
Sbjct: 223 GRIYFISDKSG--GDAIWSVSQDGSGVTQ 249



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 66/188 (35%), Gaps = 11/188 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G+   +SP + R++   + D          G     +  + +   +      L  MD DG
Sbjct: 330 GQVALASPLARRRVEFNVPDGARAR-EAVAGPEGDNLFLILDRGDT----RDLVRMDADG 384

Query: 201 AN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           +     +  + D  ++    SP+ + +         + +V +    +    +      + 
Sbjct: 385 SGEPNVIAANYDAHIWSFVVSPDGKTLV-VRDKLARLQKVDVESGAVTLLAQNTTGNDNA 443

Query: 260 ILAPRFSSNGKRALISVQKDE----AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +   FS + K    S    E      +I   +L +    + ++  F +   ++SPD   
Sbjct: 444 FVNIVFSPDSKFIAYSETGPEQFSNTANIQVQNLSTGERVQASSGKFNDFVPAFSPDGKW 503

Query: 316 IVFESDRE 323
           + F S+R 
Sbjct: 504 LYFVSERN 511



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 2/79 (2%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAPR 264
           T   D       FSP+ + +AY+    E       +  +     +R+   + +     P 
Sbjct: 437 TTGNDNAFVNIVFSPDSKFIAYSETGPEQFSNTANIQVQNLSTGERVQASSGKFNDFVPA 496

Query: 265 FSSNGKRALISVQKDEAMD 283
           FS +GK      +++ + +
Sbjct: 497 FSPDGKWLYFVSERNFSPE 515



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 82/245 (33%), Gaps = 33/245 (13%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + VM   G     LT     +     ++P+ Q +  +         V          P 
Sbjct: 91  DIYVMPVAGGRPTRLTYEGGGMTTV-GWTPDGQVIFSSRLRGSGQGEVLHTIAATGGQPS 149

Query: 252 RIGNFRSMILAPRFSSNG-----KRALISVQKD--------EAMDIYS-VDLQSNATERL 297
            I  +R+   +  + S+G     +R L +  +D            ++S +   ++   +L
Sbjct: 150 AIPLWRAN--SAAYGSDGRFFFNRRGLYARARDNAVLYRGGGMAQLWSWMPGSTDEATQL 207

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                  I         +I F SD+ G + ++ +  +GS   + S++             
Sbjct: 208 LADFGAPIRMP-MAHGGRIYFISDKSGGDAIWSVSQDGSGVTQHSEEFAFPVLQAAI--D 264

Query: 358 GDLI---------AFTKFSGEKFAIGV-MKKDGSQERLLVEDS---NLQAPTWSPSGRSL 404
           G  +          F+  S     + + +  D  Q R    D+    ++A   SP+G ++
Sbjct: 265 GGAVFIQNGADLHVFSLASNTLSTLAIDLVTDREQTRPRTLDNPMEQIEAARVSPTGDAI 324

Query: 405 IFSRK 409
             + +
Sbjct: 325 AVTAR 329


>gi|67920521|ref|ZP_00514041.1| G-protein beta WD-40 repeat [Crocosphaera watsonii WH 8501]
 gi|67858005|gb|EAM53244.1| G-protein beta WD-40 repeat [Crocosphaera watsonii WH 8501]
          Length = 1173

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 102/279 (36%), Gaps = 34/279 (12%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           I H   D +        G +          + +     ++ + +R G   + +    +  
Sbjct: 557 IGHQ--DAVNSVTFSRDGQW----------IATASSDGTIRLWNRQGQ-QKAVLRGHEGN 603

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++   FSP+ Q +A A  D  D  RV+ +     +    +    + + +  FS +G+R  
Sbjct: 604 IYGVAFSPDSQTLATAAQD--DTARVWNLQ---GKQLALLKGHDASVYSVTFSPDGQRLA 658

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +  +D    ++  D Q N+   L          ++SPD   I   + R+G  +L+    
Sbjct: 659 -TTSRDNTARVW--DKQGNSLLVLKGHKKSVDDVAFSPDGQYIA-TASRDGTAKLW---D 711

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNL 392
           +  + ++  Q+K    F   +S     IA     G    I +  K G+    L      +
Sbjct: 712 SQGNLRKTLQEKATPLFSISFSLDSQRIAAGARDGT---IYIWDKQGNLTLNLNGHQELV 768

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +  +S  G  +        D  ++L+S    G   T++
Sbjct: 769 NSVVFSQDGNLIA---SGSSDGTARLWS--TEGEEITVL 802



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 86/231 (37%), Gaps = 28/231 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + Q +A A+ D    +R++    R  +    +      I    FS + +    +  
Sbjct: 567 TFSRDGQWIATASSD--GTIRLW---NRQGQQKAVLRGHEGNIYGVAFSPDSQTLA-TAA 620

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D+   ++  +LQ      L        S ++SPD  ++   S R+   +++       +
Sbjct: 621 QDDTARVW--NLQGKQLALLKGHDASVYSVTFSPDGQRLATTS-RDNTARVW---DKQGN 674

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPT 396
              + +  + S  D  +SP G  IA     G      +    G+  + L E +  L + +
Sbjct: 675 SLLVLKGHKKSVDDVAFSPDGQYIATASRDGTA---KLWDSQGNLRKTLQEKATPLFSIS 731

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNG-------RNETLINTPAYASDP 440
           +S   + +       G     +Y  D  G        ++ L+N+  ++ D 
Sbjct: 732 FSLDSQRIA-----AGARDGTIYIWDKQGNLTLNLNGHQELVNSVVFSQDG 777



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 66/191 (34%), Gaps = 14/191 (7%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           Y     +          +   ++   +  + +  FS +G+    +   D  + ++  + Q
Sbjct: 534 YPATSPISALEQILNRIQEKNKLIGHQDAVNSVTFSRDGQWIA-TASSDGTIRLW--NRQ 590

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 L          ++SPDS  +   +     +   V    G     + +  +AS +
Sbjct: 591 GQQKAVLRGHEGNIYGVAFSPDSQTLATAAQ---DDTARVWNLQGKQLALL-KGHDASVY 646

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
              +SP G  +A T          V  K G+   +L     ++    +SP G+ +  + +
Sbjct: 647 SVTFSPDGQRLATTSRDNTA---RVWDKQGNSLLVLKGHKKSVDDVAFSPDGQYIATASR 703

Query: 410 KDGDTGSKLYS 420
              D  +KL+ 
Sbjct: 704 ---DGTAKLWD 711



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 62/347 (17%), Positives = 125/347 (36%), Gaps = 45/347 (12%)

Query: 88  KQKITNPDSIPRFQDWNSLGAQ-VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS 146
            Q I    S    + WN  G Q  ++ G       +   V F      D + +       
Sbjct: 572 GQWIATASSDGTIRLWNRQGQQKAVLRGH----EGNIYGVAFS----PDSQTLATAAQDD 623

Query: 147 SPASWRKIAHTIS------DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           +   W      ++        +Y       G          + + +    N+  V D+ G
Sbjct: 624 TARVWNLQGKQLALLKGHDASVYSVTFSPDG----------QRLATTSRDNTARVWDKQG 673

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N   +     + + +  FSP+ Q +A A+ D        L D++     K +    + +
Sbjct: 674 -NSLLVLKGHKKSVDDVAFSPDGQYIATASRDG----TAKLWDSQ-GNLRKTLQEKATPL 727

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +  FS + +R   +  +D  + I+  D Q N T  L     +  S  +S D + I   S
Sbjct: 728 FSISFSLDSQRIA-AGARDGTIYIW--DKQGNLTLNLNGHQELVNSVVFSQDGNLIASGS 784

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G  +L+   S   ++  + +  +   +D   + Q   +A     G+     V +   
Sbjct: 785 S-DGTARLW---STEGEEITVLKGHQDPIYDVALNYQSTELATASSDGKVKLWAVKQTLN 840

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           +    L  DS + +  +S  G+ L  + ++      ++Y+ +L G+N
Sbjct: 841 NGFNTL--DSYVTSADFSEDGKFLAIADERG-----QVYTWNLQGKN 880


>gi|271964476|ref|YP_003338672.1| hypothetical protein Sros_2975 [Streptosporangium roseum DSM 43021]
 gi|270507651|gb|ACZ85929.1| WD40 repeatdomain-containing protein-like protein [Streptosporangium
            roseum DSM 43021]
          Length = 1901

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 61/315 (19%), Positives = 107/315 (33%), Gaps = 38/315 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS-------PASWRKIAHTISDDIYQSI 166
            G  +    DR  V  R+WD +D + +      +          S R +A   +D   +  
Sbjct: 1386 GGTLLAAGDREGV-VRIWDPRDGQVLHALTGHTGSVYALSFAPSGRLLATGDTDGAIRLW 1444

Query: 167  TGEKGDFNS------RILFVSESVVSGIIKNSLCVMDRDGA---------NIRYLTPSRD 211
                G            ++       G +   L   D DGA           R       
Sbjct: 1445 DPVSGASRGMRTGHRAAVYQVGFSPDGSL---LASADSDGAVHLHGVAEERERVELAGHR 1501

Query: 212  QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++   F P   ++A ++ D      V L DT   +  + +      I + RFS++G  
Sbjct: 1502 GSVWPFAFRPGGGQLATSSNDG----TVRLWDTATGQCRRVLRGHGRKITSVRFSADGSM 1557

Query: 272  ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
               S   D  + I+           LT      ISA++SP    I   S+  G   ++  
Sbjct: 1558 LATSGN-DGVVRIWE-PRTGRRLRELTGQADRLISAAFSPADPTIAAASNDGG---VHFW 1612

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DS 390
             +   D +R    +    +   +SP GD +A T    +   +   +  G Q   L +   
Sbjct: 1613 NAATGDYERELDVETDHVWAEAFSPGGDHLA-TANDDDSVRVW-YRASGRQVVKLADHHG 1670

Query: 391  NLQAPTWSPSGRSLI 405
             +++  +SP GR + 
Sbjct: 1671 RVRSIAFSPDGRHVA 1685



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 58/332 (17%), Positives = 111/332 (33%), Gaps = 55/332 (16%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI--AHTISDDIYQSITGEKG 171
            G++     D      RLWD    +              R++   H       + IT  + 
Sbjct: 1514 GQLATSSNDG---TVRLWDTATGQ-------------CRRVLRGHG------RKITSVR- 1550

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
             F++    ++ S   G+++  +    R G  +R LT   D+++    FSP    +A A+ 
Sbjct: 1551 -FSADGSMLATSGNDGVVR--IWE-PRTGRRLRELTGQADRLISA-AFSPADPTIAAASN 1605

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D      V+  +       + +      + A  FS  G     +   D+++ ++      
Sbjct: 1606 DGG----VHFWNAATGDYERELDVETDHVWAEAFSPGGDHLA-TANDDDSVRVW-YRASG 1659

Query: 292  NATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                +L +      S ++SPD   +     DR  +    V +        I +      +
Sbjct: 1660 RQVVKLADHHGRVRSIAFSPDGRHVATGCDDRLAR----VWEVETGTCVAILEGHTDRVY 1715

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQER------LLVEDSNLQAPTWSPSG 401
              V+SP G  +A +  +     +  ++ D   G   R      L      L    +SP G
Sbjct: 1716 SVVFSPDGSTLA-SAGNDGDARVWDLRPDPRPGHPWRPRLLHTLTRHPGRLWTVAFSPDG 1774

Query: 402  RSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              L        D   +L+     GR+   +  
Sbjct: 1775 SLLA---TGGDDPAVRLWDAR-TGRHLHALTG 1802



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 93/320 (29%), Gaps = 43/320 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++    +   V  R+W+ +  +++  ++           A + +D    + + + G  
Sbjct: 1555 GSMLATSGNDGVV--RIWEPRTGRRL--RELTGQADRLISAAFSPADPTIAAASNDGGVH 1610

Query: 174  --------NSRILFVSESVV-------------SGIIKNSLCVMDRDGANIRYLTPSRDQ 212
                      R L V    V             +    +S+ V  R              
Sbjct: 1611 FWNAATGDYERELDVETDHVWAEAFSPGGDHLATANDDDSVRVWYRASGRQVVKLADHHG 1670

Query: 213  ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             +    FSP+ + VA    D        + +         +      + +  FS +G   
Sbjct: 1671 RVRSIAFSPDGRHVATGCDDR----LARVWEVETGTCVAILEGHTDRVYSVVFSPDGSTL 1726

Query: 273  LISVQKDEAMDIYSV--DLQSNATER------LTNTLFINISASYSPDSSQIVFESDREG 324
              S   D    ++ +  D +     R      LT       + ++SPD S +    D   
Sbjct: 1727 A-SAGNDGDARVWDLRPDPRPGHPWRPRLLHTLTRHPGRLWTVAFSPDGSLLATGGD--- 1782

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
               + +  +                +   ++P GDL+A +        +  +    +  +
Sbjct: 1783 DPAVRLWDARTGRHLHALTGHTRRIWSLAFAPAGDLLA-SAGDDGVAILWELHPGTAPAQ 1841

Query: 385  LLVEDSNLQAP-TWSPSGRS 403
             +      +     +P GR 
Sbjct: 1842 RVALLGLPEGWAAIAPDGRY 1861



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 77/226 (34%), Gaps = 20/226 (8%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
              G  +R L   R ++     FS +   +A    D      V L D     A   +   R
Sbjct: 1237 ATGLPVRNLQGHRGRVYAV-TFSRSGDLLATGASDG----TVRLWDPVTASASHVLAGHR 1291

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQI 316
              +    FS  G+    +   D  + I+  D  +    R L   L    +A++      +
Sbjct: 1292 DGVWPVVFSPAGRLIA-AGGADGTVRIW--DTATGLPYRELPGHLAPIYTATFDAGGDTL 1348

Query: 317  VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            V   D  G  +++       +  R       S +   + P G L+A     G    + + 
Sbjct: 1349 V-TGDAGGTVRMW--DVRTGEIVRTLDGHRGSVYRIAYDPGGTLLAAGDREG---VVRIW 1402

Query: 377  KK-DGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               DG     L     ++ A +++PSGR L      D D   +L+ 
Sbjct: 1403 DPRDGQVLHALTGHTGSVYALSFAPSGRLLA---TGDTDGAIRLWD 1445



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 25/153 (16%)

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDR 322
             +S +G+  +I         +   D  +    R L        + ++S     +      
Sbjct: 1214 AYSPDGETLVIGGDDGG---VLLCDSATGLPVRNLQGHRGRVYAVTFSRSGDLLA-TGAS 1269

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA------------------FT 364
            +G  +L+      +    +        +  V+SP G LIA                  + 
Sbjct: 1270 DGTVRLW--DPVTASASHVLAGHRDGVWPVVFSPAGRLIAAGGADGTVRIWDTATGLPYR 1327

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +  G    I     D   + L+  D+      W
Sbjct: 1328 ELPGHLAPIYTATFDAGGDTLVTGDAGGTVRMW 1360


>gi|300865942|ref|ZP_07110679.1| putative Peptidase C14, caspase catalytic subunit p20 [Oscillatoria
            sp. PCC 6506]
 gi|300336061|emb|CBN55837.1| putative Peptidase C14, caspase catalytic subunit p20 [Oscillatoria
            sp. PCC 6506]
          Length = 1470

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 93/265 (35%), Gaps = 18/265 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++  S      + +   D   ++ +       +    FSPN + +A  +YD      V L
Sbjct: 1171 KTFASASADGQVKLWRTDKTLLKTIKLDSSNKVSSISFSPNGKILAAGSYDK----TVTL 1226

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +       K +      + +  FS NG   L S   D+ + ++++       + +T   
Sbjct: 1227 WNAADGTQLKNLAAHNEGVTSVAFSPNGN-ILASGSDDKTIKLWNI-ADGKMLKNITEHS 1284

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S ++S D   +   S+    + + +  S+G+  K + +    +     W P   ++
Sbjct: 1285 DGITSLAFSSDGKFLASGSN---DKTVKLFNSDGTLVKTL-EGHSQAVQAVAWHPNSKIL 1340

Query: 362  AFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            A          I     D G + R L    + + + ++SP G+ L        D   KL+
Sbjct: 1341 ASASADNT---IKFWDADSGKEIRTLTGHQNAVVSVSFSPDGKILA---SGSADNTIKLW 1394

Query: 420  SIDLNGRNETLINTPAYASDPQWVG 444
            +       +TLI          +  
Sbjct: 1395 NATDRTLIKTLIGHQGQVKSMGFSP 1419



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 106/252 (42%), Gaps = 20/252 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ +     ++ +   DG  ++ LT   ++ + +  FSP+ + +A A+ D   I++++ 
Sbjct: 882  KTIATASSDKTIKLWSADGRLLQTLT-GNERSVNDLSFSPDGKLLAAASSD--GIVKLWN 938

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +D    +  K        + +  FS +GK    +   D+ + ++  +L  +  + LT   
Sbjct: 939  ID---GKLIKTFTGDSEKVNSISFSPDGKMLA-TASDDKTIKLW--NLDGSLIKTLTGHT 992

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  S+S DS  I   S+ +   +L+ +    S++ +I +       D  +SP G ++
Sbjct: 993  ERVTRISWSSDSKNIASVSE-DKTLKLWSIN---SNKSQICKGHTDYIMDVSFSPDGKIL 1048

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A          + + + D        E      + ++S  G+ L        D  ++++S
Sbjct: 1049 ATASLDKT---VKIWQPDCKIIANFTEQEKGAISVSFSADGKMLASGSD---DYTARVWS 1102

Query: 421  IDLNGRNETLIN 432
            ++  G    L+N
Sbjct: 1103 LESGGVGAILLN 1114



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 77/216 (35%), Gaps = 17/216 (7%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                   +   ++SP+ + +A A+ D      + L            GN RS+     FS
Sbjct: 865  LEGHGDRVQAVKYSPDGKTIATASSDK----TIKLWSADGRLLQTLTGNERSVNDL-SFS 919

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             +GK    +   D  + ++  ++     +  T       S S+SPD   +   SD    +
Sbjct: 920  PDGKLLA-AASSDGIVKLW--NIDGKLIKTFTGDSEKVNSISFSPDGKMLATASD---DK 973

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             + +   +GS  K ++   E       WS     IA      +   +  +  + SQ    
Sbjct: 974  TIKLWNLDGSLIKTLTGHTER-VTRISWSSDSKNIASVS-EDKTLKLWSINSNKSQICKG 1031

Query: 387  VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              D  +   ++SP G+ L  +     D   K++  D
Sbjct: 1032 HTDYIMDV-SFSPDGKILATASL---DKTVKIWQPD 1063



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 69/184 (37%), Gaps = 14/184 (7%)

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                  +   R+      + A ++S +GK    +   D+ + ++S D      + LT   
Sbjct: 854  QAIDNGKENNRLEGHGDRVQAVKYSPDGKTIA-TASSDKTIKLWSAD--GRLLQTLTGNE 910

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  S+SPD   +   S  +G  +L+    +G   K  + D E       +SP G ++
Sbjct: 911  RSVNDLSFSPDGKLLAAASS-DGIVKLW--NIDGKLIKTFTGDSE-KVNSISFSPDGKML 966

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A          I +   DGS  + L      +   +WS   +++        D   KL+S
Sbjct: 967  ATASDDKT---IKLWNLDGSLIKTLTGHTERVTRISWSSDSKNIA---SVSEDKTLKLWS 1020

Query: 421  IDLN 424
            I+ N
Sbjct: 1021 INSN 1024



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 91/246 (36%), Gaps = 18/246 (7%)

Query: 166  ITGEKGDFNSRILFVSESVVS-----GIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRF 219
            +   K D ++++  +S S        G    ++ + +  DG  ++ L    + +     F
Sbjct: 1192 LKTIKLDSSNKVSSISFSPNGKILAAGSYDKTVTLWNAADGTQLKNLAAHNEGVTSV-AF 1250

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SPN   +A  + D      + L +    +  K I      I +  FSS+GK    S   D
Sbjct: 1251 SPNGNILASGSDDK----TIKLWNIADGKMLKNITEHSDGITSLAFSSDGKFLA-SGSND 1305

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + + ++  +      + L        + ++ P+S  +   S       +    ++   + 
Sbjct: 1306 KTVKLF--NSDGTLVKTLEGHSQAVQAVAWHPNSKILASAS---ADNTIKFWDADSGKEI 1360

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            R     + +     +SP G ++A +  +     +         + L+     +++  +SP
Sbjct: 1361 RTLTGHQNAVVSVSFSPDGKILA-SGSADNTIKLWNATDRTLIKTLIGHQGQVKSMGFSP 1419

Query: 400  SGRSLI 405
             G+ LI
Sbjct: 1420 DGKILI 1425



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 89/245 (36%), Gaps = 24/245 (9%)

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            + +T      +S+    + + VS      L  ++    N   +       + +  FSP+ 
Sbjct: 993  ERVTRISWSSDSK----NIASVSEDKTLKLWSINS---NKSQICKGHTDYIMDVSFSPDG 1045

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            + +A A+ D    ++++  D +I              ++  FS++GK    S   D    
Sbjct: 1046 KILATASLD--KTVKIWQPDCKIIAN---FTEQEKGAISVSFSADGKMLA-SGSDDYTAR 1099

Query: 284  IYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            ++S++        L           S ++SPD   +   +  +   +++ +  +      
Sbjct: 1100 VWSLESGGVGAILLNQFKGHGDQVTSVNFSPDGKNLA-TASADKTVKIWRLDGD------ 1152

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            I    +       ++P G   A +  +  +  +    K   +   L   + + + ++SP+
Sbjct: 1153 IPLRNDGFIESVNFNPDGKTFA-SASADGQVKLWRTDKTLLKTIKLDSSNKVSSISFSPN 1211

Query: 401  GRSLI 405
            G+ L 
Sbjct: 1212 GKILA 1216



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 78/210 (37%), Gaps = 16/210 (7%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FS + + +A  + D    +              +       + +  FS +GK    +  
Sbjct: 1081 SFSADGKMLASGSDDYTARVWSLESGGVGAILLNQFKGHGDQVTSVNFSPDGKNLA-TAS 1139

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D+ + I+ +D        L N  FI  S +++PD       S      Q+ + +++ + 
Sbjct: 1140 ADKTVKIWRLDGD----IPLRNDGFIE-SVNFNPDGKTFASAS---ADGQVKLWRTDKTL 1191

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPT 396
             K I  D         +SP G ++A   +            DG+Q + L   +  + +  
Sbjct: 1192 LKTIKLDSSNKVSSISFSPNGKILAAGSYDKTVTLWNA--ADGTQLKNLAAHNEGVTSVA 1249

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +SP+G  L        D   KL++I  +G+
Sbjct: 1250 FSPNGNILASGSD---DKTIKLWNI-ADGK 1275



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 90/234 (38%), Gaps = 21/234 (8%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + + DG  I+  T   +++     FSP+ + +A A+ D      + L +       K + 
Sbjct: 936  LWNIDGKLIKTFTGDSEKVNSI-SFSPDGKMLATASDDK----TIKLWNLD-GSLIKTLT 989

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                 +    +SS+ K    SV +D+ + ++S++   +   +        +  S+SPD  
Sbjct: 990  GHTERVTRISWSSDSKNIA-SVSEDKTLKLWSINSNKSQICK--GHTDYIMDVSFSPDGK 1046

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             +   S     + + + Q +       + ++E       +S  G ++A          + 
Sbjct: 1047 ILATASL---DKTVKIWQPDCKIIANFT-EQEKGAISVSFSADGKMLASGSDDYTA-RVW 1101

Query: 375  VMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             ++  G    LL         + +  +SP G++L  +     D   K++ +D +
Sbjct: 1102 SLESGGVGAILLNQFKGHGDQVTSVNFSPDGKNLATAS---ADKTVKIWRLDGD 1152



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 5/97 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S    N++   D D              +    FSP+ + +A  + D+     + L +  
Sbjct: 1342 SASADNTIKFWDADSGKEIRTLTGHQNAVVSVSFSPDGKILASGSADN----TIKLWNAT 1397

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                 K +   +  + +  FS +GK  LIS   D+ +
Sbjct: 1398 DRTLIKTLIGHQGQVKSMGFSPDGK-ILISGSYDQTI 1433


>gi|163848036|ref|YP_001636080.1| WD40 domain-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222525923|ref|YP_002570394.1| WD40 domain-containing protein [Chloroflexus sp. Y-400-fl]
 gi|163669325|gb|ABY35691.1| WD40 domain protein beta Propeller [Chloroflexus aurantiacus
           J-10-fl]
 gi|222449802|gb|ACM54068.1| WD40 domain protein beta Propeller [Chloroflexus sp. Y-400-fl]
          Length = 329

 Score = 83.9 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 87/275 (31%), Gaps = 31/275 (11%)

Query: 186 SGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVA----------YATYD 232
              +   L     DG      R      +  + +P F+P   ++A              D
Sbjct: 38  GDTLSGRLLFSRDDGIWLWEGRTARRLINPPVTQPAFNPTGNQIACIVLHAGASDLVITD 97

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQ---------KDEA 281
               +   L        P  I    S   A  P +  +G   L+S Q          D  
Sbjct: 98  TAGAMLAQLTRNEPAAPPGSIERVYSAKWAFYPTWLPDGSGVLVSAQIAPPVGDPPADAP 157

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQK 339
           + I   D+        ++       +   P    IV  +    +G++QL+ + +N +   
Sbjct: 158 LAIVRYDVNGRQQVVFSDANAHLGKSVVLPSGDFIVVRTPLGSDGQQQLFRISNNQATP- 216

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                     +DP  SP G  + F         +  M  +G     L +  + ++P ++P
Sbjct: 217 --LPGAPTPAYDPALSPDGTWLVFAVGINGGSDLYAMPANGGSPIRLTDIGSARSPAFAP 274

Query: 400 SGRSLIFSRKKDGDTGSKLYS--IDLNGRNETLIN 432
            G++L F     G  G  LY   + + G    L  
Sbjct: 275 DGKTLAFLAIPPGGRGFDLYLAEVAIAGDTLQLSP 309



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 75/224 (33%), Gaps = 27/224 (12%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-- 301
               R  +R+ N    +  P F+  G +    V    A D+   D       +LT     
Sbjct: 55  LWEGRTARRLINPP--VTQPAFNPTGNQIACIVLHAGASDLVITDTAGAMLAQLTRNEPA 112

Query: 302 ----FINI--------SASYSPDSSQIVFES-------DREGKEQLYVMQSNGSDQKRIS 342
                I            ++ PD S ++  +       D      L +++ + + ++++ 
Sbjct: 113 APPGSIERVYSAKWAFYPTWLPDGSGVLVSAQIAPPVGDPPADAPLAIVRYDVNGRQQVV 172

Query: 343 Q-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPS 400
             D  A     V  P GD I      G      + +   +Q   L         P  SP 
Sbjct: 173 FSDANAHLGKSVVLPSGDFIVVRTPLGSDGQQQLFRISNNQATPLPGAPTPAYDPALSPD 232

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           G  L+F+   +G  GS LY++  NG +   +     A  P +  
Sbjct: 233 GTWLVFAVGING--GSDLYAMPANGGSPIRLTDIGSARSPAFAP 274


>gi|302506585|ref|XP_003015249.1| Pfs, NACHT and WD domain protein [Arthroderma benhamiae CBS 112371]
 gi|291178821|gb|EFE34609.1| Pfs, NACHT and WD domain protein [Arthroderma benhamiae CBS 112371]
          Length = 1538

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 53/325 (16%), Positives = 103/325 (31%), Gaps = 64/325 (19%)

Query: 149  ASWRKIAHTISDDIYQ--------SITGEKG--DFNSRILFVSESV--VSGIIKNSLCVM 196
            +  R +A   SD   +         IT  KG  D+ + I F   SV   SG    ++ + 
Sbjct: 795  SGLRHLASASSDRTIRIWDVDDGRCITILKGHSDWVNSISFKQNSVYLASGSSDKTVRIW 854

Query: 197  DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
            D   ++   +       +    FS N + +A A+ D    ++++  D    +  + + + 
Sbjct: 855  DVATSSCVKVLQGHTNWINSVAFSHNGKYLASASNDAS--IKIWNSD---GKCEQTLRSH 909

Query: 257  RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               + A  FS + +R  IS   D  + ++ + +       ++       S ++S D   I
Sbjct: 910  SWTVTALAFSPDDQRL-ISGSSDRTIKVWDMSIIGKNMRVISAHDKWVDSLTFSRDGKYI 968

Query: 317  V---------------------------------FESD-----REGKEQLYVMQSNGSDQ 338
                                              F SD             +      + 
Sbjct: 969  ASISDDWTLMIWSATTGEYMHTLGSHKDMLNGLCFSSDTYLASASSDRTARIWDITTGEC 1028

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PT 396
            K   +  E       +SP G L+  +        + V + D      L E          
Sbjct: 1029 KETLEGHEDCVNSVDFSPDGSLLVSSS---GDHTVRVWEVDTGMCIQLFEGHTESVGTAV 1085

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSI 421
            +S  G+ +  S +   D   +++SI
Sbjct: 1086 FSTDGQYIASSSR---DKSVRIWSI 1107



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 91/243 (37%), Gaps = 19/243 (7%)

Query: 182  ESVVSGIIKNSLCVMDRD--GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            + ++SG    ++ V D    G N+R ++   D+ +    FS + + +A  + D      +
Sbjct: 923  QRLISGSSDRTIKVWDMSIIGKNMRVISA-HDKWVDSLTFSRDGKYIASISDD----WTL 977

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLT 298
             +           +G+ + M+    FSS+    L S   D    I+  D+ +    E L 
Sbjct: 978  MIWSATTGEYMHTLGSHKDMLNGLCFSSD--TYLASASSDRTARIW--DITTGECKETLE 1033

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   S  +SPD S +V  S   G   + V + +     ++ +    S    V+S  G
Sbjct: 1034 GHEDCVNSVDFSPDGSLLVSSS---GDHTVRVWEVDTGMCIQLFEGHTESVGTAVFSTDG 1090

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              IA +    +   I  + +      L   D  + +  +S   + +  +     D   ++
Sbjct: 1091 QYIA-SSSRDKSVRIWSIAEVECVWVLNGHDGWVNSAVFSDDSQFIASTST---DKTVRI 1146

Query: 419  YSI 421
            + +
Sbjct: 1147 WHV 1149


>gi|154493660|ref|ZP_02032980.1| hypothetical protein PARMER_03000 [Parabacteroides merdae ATCC
           43184]
 gi|154086870|gb|EDN85915.1| hypothetical protein PARMER_03000 [Parabacteroides merdae ATCC
           43184]
          Length = 708

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 98/294 (33%), Gaps = 64/294 (21%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVY---LMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           L     S + +    AT    +   V     +  +  R    +      I     S +G+
Sbjct: 14  LLFGACSGDGKTCDRATQQKGNTENVIGRSDIKVKDGRMTPEVLWAMGRIGGMNVSPDGQ 73

Query: 271 RALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           + + +V      +     +++ ++      +++T T +    A +     +I F  +  G
Sbjct: 74  KVVYTVAYYSVPENRSNREVFVMNADGTDNKQITKTSYSENEAVWIKGGKKIAFLCNESG 133

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF------SGEKF------- 371
             QL+ M  +GSD++++S + E       +SP    + F         + +K+       
Sbjct: 134 SSQLWEMNPDGSDRRQLS-EYEGDIEGFAFSPDEKKVLFISQVKTVKSTADKYPDLDKAT 192

Query: 372 --------------------AIGVMKKDG---SQERLLVEDSNLQAP----------TWS 398
                                  V   DG   S    ++E    ++P           W+
Sbjct: 193 GIIVTDLMYKHWDEWVTTAPHPFVADFDGKAISNPVDIMEGEPFESPMKPFGGIEQLAWN 252

Query: 399 PSGRSLIFSRKKDGD------TGSKLYSIDLNGRNETLINTP--AYASDPQWVG 444
            +   + ++ +K         T S +Y  DLN +    I+     Y ++PQ+  
Sbjct: 253 TTSDKIAYTSRKKTGKEYALSTNSDIYVYDLNTKKTANISEGIMGYDTNPQYSP 306



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 55/314 (17%), Positives = 103/314 (32%), Gaps = 65/314 (20%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG + + +T +      E  +    +K+A+   +     +++ 
Sbjct: 82  YSVPENRSNREVFVMNADGTDNKQITKT-SYSENEAVWIKGGKKIAFLCNESGSS-QLWE 139

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------------DEAMDIYSVD 288
           M+       +++  +   I    FS + K+ L   Q              D+A  I   D
Sbjct: 140 MNPD-GSDRRQLSEYEGDIEGFAFSPDEKKVLFISQVKTVKSTADKYPDLDKATGIIVTD 198

Query: 289 LQSNAT-ERLTNTLFI-----------------NISAS--------------YSPDSSQI 316
           L      E +T                                         ++  S +I
Sbjct: 199 LMYKHWDEWVTTAPHPFVADFDGKAISNPVDIMEGEPFESPMKPFGGIEQLAWNTTSDKI 258

Query: 317 VFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            + S +             +YV   N      IS+       +P +SP G  IA+     
Sbjct: 259 AYTSRKKTGKEYALSTNSDIYVYDLNTKKTANISEGIMGYDTNPQYSPDGKFIAWQSMER 318

Query: 369 EKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +      + VM  +  ++    +  DSN+    WS   ++L F+    G+  S++Y I
Sbjct: 319 DGYESDQNRLMVMNLETGEKIFASKDFDSNVDGFVWSADAKALYFTGVWHGE--SQVYKI 376

Query: 422 DLNGRNETLINTPA 435
           DL   N+    T  
Sbjct: 377 DLTDSNKITPLTSG 390



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 69/220 (31%), Gaps = 25/220 (11%)

Query: 194 CVMDRDG---ANIRYLTPSRD-QILFEP-------RFSPNQQKVAYAT-------YDDED 235
            V D DG   +N   +      +   +P        ++    K+AY +       Y    
Sbjct: 215 FVADFDGKAISNPVDIMEGEPFESPMKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYALST 274

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMD----IYSVDLQ 290
              +Y+ D    +              P++S +GK     S+++D        +  ++L+
Sbjct: 275 NSDIYVYDLNTKKTANISEGIMGYDTNPQYSPDGKFIAWQSMERDGYESDQNRLMVMNLE 334

Query: 291 SNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +      +     N+    +S D+  + F     G+ Q+Y +    S++          Y
Sbjct: 335 TGEKIFASKDFDSNVDGFVWSADAKALYFTGVWHGESQVYKIDLTDSNKITPLTSGMYDY 394

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVE 388
                  +  LI           I  +   D ++   L  
Sbjct: 395 AGVALLGEHKLIVQRHSLSMGDEIYSIDLADNNKIAQLTT 434


>gi|284038122|ref|YP_003388052.1| Fibronectin type III domain protein [Spirosoma linguale DSM 74]
 gi|283817415|gb|ADB39253.1| Fibronectin type III domain protein [Spirosoma linguale DSM 74]
          Length = 405

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 72/185 (38%), Gaps = 12/185 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I ++S    +      L V + +    R L   +     E  +S + Q +A+  ++ E 
Sbjct: 190 SIAYLSTVNTNTSYTTQLFVKNLESGATRLLETKQAIFSLE--WSSDSQSIAFMAFNLES 247

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAP------RFSSNGKRALISV----QKDEAMDIY 285
                +   +I           S+ L         +S +G+  ++S+    Q      + 
Sbjct: 248 NAGTGVWLRKISEDTSVPLYIPSVGLNQLRTDQLDWSPDGQSVVVSLEIPLQGQVGTQLL 307

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            + +   +++ +  + + +   +YSPD +++ F S R G   +++ +      ++++   
Sbjct: 308 KIPIGGGSSQAILASNWQDRYPTYSPDGTRLAFISTRSGYPAIWLYELQTGKLRQLTGVG 367

Query: 346 EASYF 350
           E  Y+
Sbjct: 368 EGFYY 372



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 82/253 (32%), Gaps = 30/253 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N   L P+   ++    +S     + Y++  +     V        R  K+ G++    
Sbjct: 131 GNTNVLFPNSTPLVTFGSWS--GSTLLYSSSLN---TWVIQSTDGATRTLKQEGSY---- 181

Query: 261 LAPRFSSNGKRALISVQKDEAM----DIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             P  S +G+        +        ++  +L+S AT  L     I  S  +S DS  I
Sbjct: 182 --PLLSPDGRSIAYLSTVNTNTSYTTQLFVKNLESGATRLLETKQAI-FSLEWSSDSQSI 238

Query: 317 VF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGE 369
            F     ES+      L  +  + S    I              WSP G  +  +     
Sbjct: 239 AFMAFNLESNAGTGVWLRKISEDTSVPLYIPSVGLNQLRTDQLDWSPDGQSVVVSLEIPL 298

Query: 370 KFAIGVMKK-----DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +  +G          GS + +L  +   + PT+SP G  L F   + G     ++  +L 
Sbjct: 299 QGQVGTQLLKIPIGGGSSQAILASNWQDRYPTYSPDGTRLAFISTRSG--YPAIWLYELQ 356

Query: 425 GRNETLINTPAYA 437
                 +      
Sbjct: 357 TGKLRQLTGVGEG 369


>gi|158339297|ref|YP_001520474.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158309538|gb|ABW31155.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1210

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 62/379 (16%), Positives = 126/379 (33%), Gaps = 72/379 (18%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS-----------DDI 162
           G+++  G D  ++ F  WD++  + +   +  +     R  A   S           D  
Sbjct: 620 GKLLASGGDDYKIVF--WDIQTGQCLKTLQEHTG----RVCALMFSPNGQALVSSSEDQT 673

Query: 163 YQ-------SITGEKGDFNSRILFVSE-----SVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            +                  +I  V        +VSG    ++ + D             
Sbjct: 674 IRLWEVNSGECCAIMSGHTQQIWSVQFDPEGKRLVSGGEDKTVKIWDVQTGQCLNTFTGH 733

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
              +    FSP+ Q V  A++D      + L + +     + +    + I +  FS +G+
Sbjct: 734 TNWIGSVAFSPDGQLVGSASHDQ----TIRLWNAQTGECLQILKGHTNWIWSIAFSPDGQ 789

Query: 271 RALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
               S  +D  + ++  ++ +    + LT       S  +SPD S +      +   +L+
Sbjct: 790 MLA-SGSEDHTVRLW--NVHTGECLKVLTGHTHRVWSVVFSPDQSMLA-SGGEDQTIRLW 845

Query: 330 VM--------QSNGSDQK----------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            M         ++    +          R  Q      +   +SP G  +A      EKF
Sbjct: 846 EMSRLVSEEYSADSRTSQLHWPLSARCLRTLQGHTNQVWGIAFSPDGQRLA--SVGDEKF 903

Query: 372 AIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID------- 422
            I +   +     + L+     + +  WSP G +L        D   +L+ I        
Sbjct: 904 -IRIWHTETRICNQILVGHTRRISSVDWSPDGVTLA---SGGEDQTVRLWDIKTGSCLKI 959

Query: 423 LNGRNETLINTPAYASDPQ 441
           L+G  + + +  A++ D  
Sbjct: 960 LSGHTKQIWSV-AFSPDGA 977



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 82/260 (31%), Gaps = 35/260 (13%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V S     ++ + +        +       ++   FSP+ Q +A  + D      V L +
Sbjct: 749 VGSASHDQTIRLWNAQTGECLQILKGHTNWIWSIAFSPDGQMLASGSEDH----TVRLWN 804

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---------------- 287
                  K +      + +  FS +      S  +D+ + ++ +                
Sbjct: 805 VHTGECLKVLTGHTHRVWSVVFSPDQSMLA-SGGEDQTIRLWEMSRLVSEEYSADSRTSQ 863

Query: 288 ---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
               L +     L          ++SPD  ++    D    + + +  +      +I   
Sbjct: 864 LHWPLSARCLRTLQGHTNQVWGIAFSPDGQRLASVGDE---KFIRIWHTETRICNQILVG 920

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLV-EDSNLQAPTWSPSGR 402
                    WSP G  +A     GE   + +   K GS  ++L      + +  +SP G 
Sbjct: 921 HTRRISSVDWSPDGVTLA---SGGEDQTVRLWDIKTGSCLKILSGHTKQIWSVAFSPDGA 977

Query: 403 SLIFSRKKDGDTGSKLYSID 422
            L        D   KL+ +D
Sbjct: 978 ILA---SGGEDQTIKLWLVD 994



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 93/301 (30%), Gaps = 47/301 (15%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-- 184
           E  LWDV D + +                          +T    D+   + F +     
Sbjct: 590 ECHLWDVADGQLL--------------------------LTLPGVDWVRSVAFNTNGKLL 623

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            SG     +   D                +    FSPN Q +  ++ D      + L + 
Sbjct: 624 ASGGDDYKIVFWDIQTGQCLKTLQEHTGRVCALMFSPNGQALVSSSEDQ----TIRLWEV 679

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFI 303
                   +      I + +F   GKR + S  +D+ + I+  D+Q+       T     
Sbjct: 680 NSGECCAIMSGHTQQIWSVQFDPEGKRLV-SGGEDKTVKIW--DVQTGQCLNTFTGHTNW 736

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SPD             + + +  +   +  +I +      +   +SP G ++A 
Sbjct: 737 IGSVAFSPDGQL---VGSASHDQTIRLWNAQTGECLQILKGHTNWIWSIAFSPDGQMLA- 792

Query: 364 TKFSGEKFAIGVMKKDGSQ-ERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                E   + +      +  ++L      + +  +SP    L        D   +L+ +
Sbjct: 793 --SGSEDHTVRLWNVHTGECLKVLTGHTHRVWSVVFSPDQSMLA---SGGEDQTIRLWEM 847

Query: 422 D 422
            
Sbjct: 848 S 848



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 87/236 (36%), Gaps = 21/236 (8%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            A            ++   FSP+ Q++A       D   + +  T      + +      I
Sbjct: 870  ARCLRTLQGHTNQVWGIAFSPDGQRLASV----GDEKFIRIWHTETRICNQILVGHTRRI 925

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
             +  +S +G     S  +D+ + ++  D+++ +  + L+       S ++SPD + +   
Sbjct: 926  SSVDWSPDGVTLA-SGGEDQTVRLW--DIKTGSCLKILSGHTKQIWSVAFSPDGAILA-- 980

Query: 320  SDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                G++Q + +   +  D  +  +  +   +   ++P   L+A   F      + +   
Sbjct: 981  --SGGEDQTIKLWLVDRQDCVKTMEGHKNWVWSLDFNPVNSLLASGSFD---HTVKLWDI 1035

Query: 379  DGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +       +E     +    +SP G+ L        D   +++ + L G+   ++ 
Sbjct: 1036 ETGDCVRTLEGHQGWIMGVAFSPDGQLLA--SGSPYDKTIRIWEV-LTGKCLEILP 1088



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 72/218 (33%), Gaps = 10/218 (4%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + + S   +  + +   +      +     + +    +SP+   +A       +   V L
Sbjct: 893  QRLASVGDEKFIRIWHTETRICNQILVGHTRRISSVDWSPDGVTLA----SGGEDQTVRL 948

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D +     K +      I +  FS +G     S  +D+ + ++ VD Q    + +    
Sbjct: 949  WDIKTGSCLKILSGHTKQIWSVAFSPDGAILA-SGGEDQTIKLWLVDRQD-CVKTMEGHK 1006

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S  ++P +S +   S       + +      D  R  +  +       +SP G L+
Sbjct: 1007 NWVWSLDFNPVNSLLASGSF---DHTVKLWDIETGDCVRTLEGHQGWIMGVAFSPDGQLL 1063

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            A      +   I  +   G    +L E S       SP
Sbjct: 1064 ASGSPYDKTIRIWEV-LTGKCLEILPEQSAYCLAFSSP 1100



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 79/264 (29%), Gaps = 40/264 (15%)

Query: 102  DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
            DW+  G        +   G+D+     RLWD+K    +  K                   
Sbjct: 929  DWSPDGV------TLASGGEDQ---TVRLWDIKTGSCL--KILSGHTKQ----------- 966

Query: 162  IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            I+       G              SG    ++ +   D  +           ++   F+P
Sbjct: 967  IWSVAFSPDGAIL----------ASGGEDQTIKLWLVDRQDCVKTMEGHKNWVWSLDFNP 1016

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
                +A  ++D      V L D       + +   +  I+   FS +G+        D+ 
Sbjct: 1017 VNSLLASGSFDH----TVKLWDIETGDCVRTLEGHQGWIMGVAFSPDGQLLASGSPYDKT 1072

Query: 282  MDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            + I+ V L     E L           S   +P S Q    +     + + +  +N    
Sbjct: 1073 IRIWEV-LTGKCLEILPEQSAYCLAFSSPLRAPSSEQDAILAIGGLDQTIKLWNTNTKKI 1131

Query: 339  KRISQDKEASYFDPVWSPQGDLIA 362
              +    +   FD  +SP    IA
Sbjct: 1132 TCLPTLHKRWIFDIAFSPDCQTIA 1155



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 32/242 (13%), Positives = 79/242 (32%), Gaps = 18/242 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++V+S + +N    +   G N+  L       +    FS    ++A      +D+     
Sbjct: 496 QAVLSTLRQNQDYRLSYAGGNVLNLCRQGQLDIKGFDFS----QLAIWHAFLQDVELQQT 551

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             T  + +        S IL+  FS +G+    S   D   + +  D+       L    
Sbjct: 552 NFTEAEFSNASFAQTFSSILSLAFSPDGQLLAAS---DTNGECHLWDVADGQL--LLTLP 606

Query: 302 FINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            ++   S +++ +   +    D     ++           +  Q+        ++SP G 
Sbjct: 607 GVDWVRSVAFNTNGKLLASGGD---DYKIVFWDIQTGQCLKTLQEHTGRVCALMFSPNGQ 663

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +  +    +   +  +        +      + +  + P G+ L+       D   K++
Sbjct: 664 ALV-SSSEDQTIRLWEVNSGECCAIMSGHTQQIWSVQFDPEGKRLV---SGGEDKTVKIW 719

Query: 420 SI 421
            +
Sbjct: 720 DV 721


>gi|145511403|ref|XP_001441629.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408879|emb|CAK74232.1| unnamed protein product [Paramecium tetraurelia]
          Length = 672

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 81/225 (36%), Gaps = 15/225 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ SG    S+ + D      +         ++   FS +   +A  +Y+      + L 
Sbjct: 308 TLASGSQDESISLWDMKTGQQKAKLDGHSGSVYSVNFSHDGTTLASGSYNF-----INLW 362

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D +  +   +I      + +  FS +G     +   D+ +  + V+       +L   L 
Sbjct: 363 DFKTGQLKTKIECQLGSVYSVSFSPDGTTLA-TGSDDDFICFWDVN-TGQQIAKLDGHLG 420

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++SPD + +   S     E +++        K    +          SP G  +A
Sbjct: 421 RVYSVNFSPDGNTLASGSC---DESIHLWDVKTEQLKAKLDEHINGILSVCSSPDGTTLA 477

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
              +      I +      QE+ +++   S +Q+  +SP G +L 
Sbjct: 478 SGSWDKS---IRLWDVKTRQEKAMLDGHTSYVQSVRFSPDGSTLA 519



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 95/296 (32%), Gaps = 43/296 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G  +  G D   + F  WDV   +QI                H     +Y       G  
Sbjct: 389 GTTLATGSDDDFICF--WDVNTGQQIAKLD-----------GHL--GRVYSVNFSPDG-- 431

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    ++ SG    S+ + D     ++         +     SP+   +A  ++D 
Sbjct: 432 --------NTLASGSCDESIHLWDVKTEQLKAKLDEHINGILSVCSSPDGTTLASGSWDK 483

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L D +  +    +    S + + RFS +G          +   I   D+++  
Sbjct: 484 ----SIRLWDVKTRQEKAMLDGHTSYVQSVRFSPDGSTLA---SGSDDKSICIWDIKTGQ 536

Query: 294 TER--LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            +R  L +T  I +S  +S D   +   S     + +          K            
Sbjct: 537 LKRKLLGHTSGI-LSVYFSHDGHTLASGSL---DKSILFWDVQTGQLKNKYVGHTTGILA 592

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
             +SP G  +A         +I +      +++ ++    S +Q+  +SP G +L 
Sbjct: 593 VCFSPDGTTLASCS---SNMSIRLWDVKKGEQQAILNGHTSYVQSVCFSPDGSTLA 645



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 91/233 (39%), Gaps = 19/233 (8%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           ++ F  +S       NS+ + D     I+ +     ++  +  FSP    +A+++     
Sbjct: 219 QVCFSKDSKFFASCDNSIIIWDLRTGKIKSIIKGDAEVKSQ-CFSPKNSTLAFSSRQF-- 275

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +YL + +  +   ++  +   + +  FS +G     S  +DE++ ++  D+++   +
Sbjct: 276 ---IYLWNLKSGKQISKLDGYSKKVNSICFSPDGSTLA-SGSQDESISLW--DMKTGQQK 329

Query: 296 -RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +L        S ++S D + +           + +        K   + +  S +   +
Sbjct: 330 AKLDGHSGSVYSVNFSHDGTTLA----SGSYNFINLWDFKTGQLKTKIECQLGSVYSVSF 385

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
           SP G  +A    S + F I     +  Q+   ++     + +  +SP G +L 
Sbjct: 386 SPDGTTLA--TGSDDDF-ICFWDVNTGQQIAKLDGHLGRVYSVNFSPDGNTLA 435



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 81/259 (31%), Gaps = 22/259 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            S+      S ++   +  + + +              + +    FSP+   +A  + D+
Sbjct: 257 KSQCFSPKNSTLAFSSRQFIYLWNLKSGKQISKLDGYSKKVNSICFSPDGSTLASGSQDE 316

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L D +  +   ++      + +  FS +G              I   D ++  
Sbjct: 317 ----SISLWDMKTGQQKAKLDGHSGSVYSVNFSHDGTTLA----SGSYNFINLWDFKTGQ 368

Query: 294 T-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              ++   L    S S+SPD + +   SD    + +     N   Q           +  
Sbjct: 369 LKTKIECQLGSVYSVSFSPDGTTLATGSD---DDFICFWDVNTGQQIAKLDGHLGRVYSV 425

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPSGRSLIFSRKK 410
            +SP G+ +A          I +      Q +  +++      +   SP G +L      
Sbjct: 426 NFSPDGNTLASGSCDES---IHLWDVKTEQLKAKLDEHINGILSVCSSPDGTTLA----- 477

Query: 411 DGDTGSKLYSIDLNGRNET 429
            G     +   D+  R E 
Sbjct: 478 SGSWDKSIRLWDVKTRQEK 496



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 73/189 (38%), Gaps = 12/189 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A  + DD     +   D    +   ++      + +  FS +G     S  
Sbjct: 384 SFSPDGTTLATGSDDD----FICFWDVNTGQQIAKLDGHLGRVYSVNFSPDGNTLA-SGS 438

Query: 278 KDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            DE++ ++  D+++   + +L   +   +S   SPD + +   S     + + +      
Sbjct: 439 CDESIHLW--DVKTEQLKAKLDEHINGILSVCSSPDGTTLASGS---WDKSIRLWDVKTR 493

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +K +     +      +SP G  +A +    +   I  +K    + +LL   S + +  
Sbjct: 494 QEKAMLDGHTSYVQSVRFSPDGSTLA-SGSDDKSICIWDIKTGQLKRKLLGHTSGILSVY 552

Query: 397 WSPSGRSLI 405
           +S  G +L 
Sbjct: 553 FSHDGHTLA 561


>gi|75911051|ref|YP_325347.1| WD-40 repeat-containing serine/threonine protein kinase [Anabaena
           variabilis ATCC 29413]
 gi|75704776|gb|ABA24452.1| serine/threonine protein kinase with WD40 repeats [Anabaena
           variabilis ATCC 29413]
          Length = 676

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 47/339 (13%), Positives = 111/339 (32%), Gaps = 32/339 (9%)

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITN--PDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
           ++ V  DL        I Q S   ++    P S      W++  +  L      K+ +  
Sbjct: 292 ADEVMNDL--------IKQRSLLSRLKTTIPKSALFSTSWSA--STSLTASTTKKQARKS 341

Query: 124 LRVEFR---LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
           L  +F+   L +      ++G        S  ++    S+   Q  T +    +   +  
Sbjct: 342 LNGKFKQQLLINTMSA--LLGLVGVGHLQSLPQLITKFSEISTQPYTLKGHASDVNSVAF 399

Query: 181 SESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           S +     SG    ++ V +       +  P     ++   FSP+ + +  A  D     
Sbjct: 400 SPNGEFLASGSDDKTIKVWNLKTKQKIHTLPGHSGWVWAIAFSPDGKTLVSAGADK---- 455

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + L +       + +      + +  FS +GK    S   D+ + ++++         L
Sbjct: 456 TIKLWNLATGTEIRTLKGHSQGVASVAFSPDGKTLA-SGSLDKTIKLWNL-ATGKEIRTL 513

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +    +  + ++SPD   +   S     + + +     +   R  +         V++P 
Sbjct: 514 SEHSNVVANVAFSPDGKTLASGS---WDKTIKLWNLTTNKVFRTLEGHSDLVMSVVFNPD 570

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           G  +A          I +      +    ++  + +  +
Sbjct: 571 GKTLASASKDKT---IRLWNLAAGKTIRTLKGHSDKVNS 606



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 83/231 (35%), Gaps = 19/231 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             Y        +    FSPN + +A  + D      + + + +  +    +      + A
Sbjct: 383 QPYTLKGHASDVNSVAFSPNGEFLASGSDDK----TIKVWNLKTKQKIHTLPGHSGWVWA 438

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
             FS +GK  + S   D+ + ++  +L +    R L        S ++SPD   +   S 
Sbjct: 439 IAFSPDGKTLV-SAGADKTIKLW--NLATGTEIRTLKGHSQGVASVAFSPDGKTLASGSL 495

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               + + +       + R   +      +  +SP G  +A   +      I +     +
Sbjct: 496 ---DKTIKLWNLATGKEIRTLSEHSNVVANVAFSPDGKTLASGSWDKT---IKLWNLTTN 549

Query: 382 QERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +    +E  +    +  ++P G++L  + K   D   +L+++       TL
Sbjct: 550 KVFRTLEGHSDLVMSVVFNPDGKTLASASK---DKTIRLWNLAAGKTIRTL 597



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 87/264 (32%), Gaps = 17/264 (6%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I+         +        +++VS     ++ + +              Q +    FSP
Sbjct: 426 IHTLPGHSGWVWAIAFSPDGKTLVSAGADKTIKLWNLATGTEIRTLKGHSQGVASVAFSP 485

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +A  + D      + L +    +  + +    +++    FS +GK    S   D+ 
Sbjct: 486 DGKTLASGSLDK----TIKLWNLATGKEIRTLSEHSNVVANVAFSPDGKTLA-SGSWDKT 540

Query: 282 MDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + ++  +L +N   R L     + +S  ++PD   +   S     + + +         R
Sbjct: 541 IKLW--NLTTNKVFRTLEGHSDLVMSVVFNPDGKTLASASK---DKTIRLWNLAAGKTIR 595

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWS 398
             +         V+ P+   +  +  +     +        +    +  +   + +   S
Sbjct: 596 TLKGHSDKVNSVVYVPRNSTVLASGSNDNTIKLW--NLTTGEIIRTLKRDSGYIYSVAIS 653

Query: 399 PSGRSLIFSRKKDGDTGSKLYSID 422
           P GR+L        +   K++ + 
Sbjct: 654 PDGRNLA--SGGSAENIIKIWPMS 675


>gi|218262543|ref|ZP_03476964.1| hypothetical protein PRABACTJOHN_02643 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223329|gb|EEC95979.1| hypothetical protein PRABACTJOHN_02643 [Parabacteroides johnsonii
           DSM 18315]
          Length = 708

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 91/263 (34%), Gaps = 61/263 (23%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATE 295
           +  +  R    +      I     S +G++ + +V      +     +++ ++      +
Sbjct: 45  IKVKDGRMTPEVLWAMGRIGGMNVSPDGQKVVYTVAYYSVPENRSNREVFVMNADGTDNK 104

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++T T +    A +     +I F  +  G  QL+ M  +GSD+K++S+  +       +S
Sbjct: 105 QITKTAYSENEAVWIKGGKKIAFLCNESGSSQLWEMNPDGSDRKQLSRY-DGDIEGFAFS 163

Query: 356 PQGDLIAFTKF------SGEKF---------------------------AIGVMKKDG-- 380
           P    + F         + +K+                              V   DG  
Sbjct: 164 PDEKKVLFISQVKTVKSTADKYPDLDKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGKA 223

Query: 381 -SQERLLVEDSNLQAP----------TWSPSGRSLIFSRKKDGD------TGSKLYSIDL 423
            S    ++E    ++P           W+ +   + ++ +K         T S +Y  DL
Sbjct: 224 ISNPVDIMEGEPFESPMKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYALSTNSDIYVYDL 283

Query: 424 NGRNETLINTP--AYASDPQWVG 444
           N +  T I+     Y ++PQ+  
Sbjct: 284 NTKETTNISEGIMGYDTNPQYSP 306



 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 57/317 (17%), Positives = 107/317 (33%), Gaps = 66/317 (20%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + VM+ DG + + +T +      E  +    +K+A+   +     +++ 
Sbjct: 82  YSVPENRSNREVFVMNADGTDNKQITKT-AYSENEAVWIKGGKKIAFLCNESGSS-QLWE 139

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------------DEAMDIYSVD 288
           M+       K++  +   I    FS + K+ L   Q              D+A  I   D
Sbjct: 140 MNPD-GSDRKQLSRYDGDIEGFAFSPDEKKVLFISQVKTVKSTADKYPDLDKATGIIVTD 198

Query: 289 LQSNAT-ERLTNTLFI-----------------NISAS--------------YSPDSSQI 316
           L      E +T                                         ++  S +I
Sbjct: 199 LMYKHWDEWVTTAPHPFVADFDGKAISNPVDIMEGEPFESPMKPFGGIEQLAWNTTSDKI 258

Query: 317 VFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            + S +             +YV   N  +   IS+       +P +SP G  IA+     
Sbjct: 259 AYTSRKKTGKEYALSTNSDIYVYDLNTKETTNISEGIMGYDTNPQYSPDGKFIAWQSMER 318

Query: 369 EKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +      + VM  +  ++    +  DSN+    WS   ++L F+    G+  S++Y I
Sbjct: 319 DGYESDQNRLMVMNLETGEKIFASKDFDSNVDGFVWSADAKALYFTGVWHGE--SQVYKI 376

Query: 422 DL-NGRNETLINTPAYA 437
           DL +G   T + +  Y 
Sbjct: 377 DLKDGNKITPLTSGMYD 393



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 86/270 (31%), Gaps = 61/270 (22%)

Query: 220 SPNQQKV----AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ QKV    AY +  +    R   +        K+I           +   GK+    
Sbjct: 69  SPDGQKVVYTVAYYSVPENRSNREVFVMNADGTDNKQITKTAYSENEAVWIKGGKKIAFL 128

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------------- 321
             +  +  ++ ++   +  ++L+         ++SPD  +++F S               
Sbjct: 129 CNESGSSQLWEMNPDGSDRKQLSRYDGDIEGFAFSPDEKKVLFISQVKTVKSTADKYPDL 188

Query: 322 -------------------REGKEQLYVMQSNG---SDQKRISQD--------KEASYFD 351
                                     +V   +G   S+   I +                
Sbjct: 189 DKATGIIVTDLMYKHWDEWVTTAPHPFVADFDGKAISNPVDIMEGEPFESPMKPFGGIEQ 248

Query: 352 PVWSPQGDLIAFTKF--SGEKF------AIGVMKKDGSQERLLVED--SNLQAPTWSPSG 401
             W+   D IA+T    +G+++       I V   +  +   + E        P +SP G
Sbjct: 249 LAWNTTSDKIAYTSRKKTGKEYALSTNSDIYVYDLNTKETTNISEGIMGYDTNPQYSPDG 308

Query: 402 RSLIF-SRKKDG--DTGSKLYSIDLNGRNE 428
           + + + S ++DG     ++L  ++L    +
Sbjct: 309 KFIAWQSMERDGYESDQNRLMVMNLETGEK 338



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 67/220 (30%), Gaps = 25/220 (11%)

Query: 194 CVMDRDG---ANIRYLTPSRD-QILFEP-------RFSPNQQKVAYAT-------YDDED 235
            V D DG   +N   +      +   +P        ++    K+AY +       Y    
Sbjct: 215 FVADFDGKAISNPVDIMEGEPFESPMKPFGGIEQLAWNTTSDKIAYTSRKKTGKEYALST 274

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMD----IYSVDLQ 290
              +Y+ D                   P++S +GK     S+++D        +  ++L+
Sbjct: 275 NSDIYVYDLNTKETTNISEGIMGYDTNPQYSPDGKFIAWQSMERDGYESDQNRLMVMNLE 334

Query: 291 SNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +      +     N+    +S D+  + F     G+ Q+Y +     ++          Y
Sbjct: 335 TGEKIFASKDFDSNVDGFVWSADAKALYFTGVWHGESQVYKIDLKDGNKITPLTSGMYDY 394

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVE 388
                  +  LI           I  +   D ++   L  
Sbjct: 395 AGVALLGENKLIVQRHSLSMGDEIYSIDLADNNKVAQLTT 434


>gi|197123923|ref|YP_002135874.1| serine/threonine protein kinase with WD40 repeats [Anaeromyxobacter
           sp. K]
 gi|196173772|gb|ACG74745.1| serine/threonine protein kinase with WD40 repeats [Anaeromyxobacter
           sp. K]
          Length = 1072

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 58/373 (15%), Positives = 127/373 (34%), Gaps = 42/373 (11%)

Query: 77  DVFNLI--SQDSFKQKITNPDSIPRFQDWN------SLGAQVLVT------GRVIKE-GK 121
               +I     +       P  +     W+      ++G++  V       GRV +  G 
Sbjct: 553 GFVRVIASPGGAVLATAPLPGGVVWSVAWSPDGRLVAVGSEDGVVRLLGPDGRVRQSLGA 612

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             L V    +D    + + G +   +   WR  A     ++   + G +G          
Sbjct: 613 PGLAVSSVAFDRAGTRVVAGSQ-DGAARVWRLGA--AVPEV--RLRGHRGSVAYAAFAPD 667

Query: 182 ESVV-SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
              V +G    ++ +   DG     +      +   P   P+  ++    +       + 
Sbjct: 668 GRRVITGGTDGTVRIWPADGEGSPVVLRGHTVVDGAPT--PDGSRL----FTRGTDDVIR 721

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +  T   R   ++    +++   +++ +G R L +   D    ++   +   A   + + 
Sbjct: 722 VWRTDDPRQRGQLVGHEALVDTVQWTRDGTRVL-TASHDGTARLW--PVHGGAALTVRDP 778

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             +  SA   P     V  S+      + V  +      R  +  +       +SP G L
Sbjct: 779 GNVIHSADLDPTERTFVTSSE---DRTVRVWDAATGALVRELRGHDGPVLSAAFSPDGTL 835

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           IA          + V + DG+   L+     + L A TW+P G+++I S + +    + +
Sbjct: 836 IASGSLDKT---VRVWRADGTGTPLVFRGHGAVLTAVTWAPDGKAVISSSQDE----ASV 888

Query: 419 YSIDLNGRNETLI 431
           +   L+G    ++
Sbjct: 889 HVWPLDGSPPRVV 901



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 103/312 (33%), Gaps = 30/312 (9%)

Query: 118  KEGKDRLRVEFRLWDVK----DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
               + +L     L D      D  +++      +   W    H  +    +         
Sbjct: 728  PRQRGQLVGHEALVDTVQWTRDGTRVLTASHDGTARLWP--VHGGAALTVR---DPGNVI 782

Query: 174  NSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            +S  L  +E   V+     ++ V D     +       D  +    FSP+   +A  + D
Sbjct: 783  HSADLDPTERTFVTSSEDRTVRVWDAATGALVRELRGHDGPVLSAAFSPDGTLIASGSLD 842

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                  V +        P       +++ A  ++ +GK  + S Q + ++ ++ +D    
Sbjct: 843  K----TVRVWRADGTGTPLVFRGHGAVLTAVTWAPDGKAVISSSQDEASVHVWPLD---G 895

Query: 293  ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +  R+         A+ +PD + +V     E    L +   +G ++       E   F  
Sbjct: 896  SPPRVVRAGRPVFRAAVAPDGTLLV----PEQGGTLRLFGPDGEERAPFPALPEG-LFSV 950

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              S  G   A     G    + V  +DGS     L   +  +    +SP G  L      
Sbjct: 951  AVSRDGRRWALASSDGT---VRVYPRDGSGDPLVLRAHEGAVGNAAFSPDGTELA---TV 1004

Query: 411  DGDTGSKLYSID 422
              D  +++ ++D
Sbjct: 1005 SADGTARVSTVD 1016



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 80/252 (31%), Gaps = 21/252 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             +V+     +L V   DG       P+    L      P  +  A    D     R++L
Sbjct: 461 RRLVTADHAGTLRVFPLDGGGAPRTLPAGGVPLVRLALDPAGRIAAAGALDG----RLWL 516

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D   D  P+ +      +LA  FS +G R   +   D  + + +      A   L    
Sbjct: 517 ADLAGDAPPRSV-VHDGAVLALAFSPDGTRVA-TGTADGFVRVIASP--GGAV--LATAP 570

Query: 302 ---FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               +  S ++SPD   +   S+    + +  +       ++       +     +   G
Sbjct: 571 LPGGVVWSVAWSPDGRLVAVGSE----DGVVRLLGPDGRVRQSLGAPGLAVSSVAFDRAG 626

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +      G    +  +     + RL     ++    ++P GR +I       D   ++
Sbjct: 627 TRVVAGSQDGAA-RVWRLGAAVPEVRLRGHRGSVAYAAFAPDGRRVI---TGGTDGTVRI 682

Query: 419 YSIDLNGRNETL 430
           +  D  G    L
Sbjct: 683 WPADGEGSPVVL 694



 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 105/290 (36%), Gaps = 37/290 (12%)

Query: 104  NSLGAQVLV-TGRVIKEGKDRLRVE----FRLWDVKDRKQIIGK---------------K 143
              +G + LV T +  ++G   L        RLW V     +  +               +
Sbjct: 733  QLVGHEALVDTVQWTRDGTRVLTASHDGTARLWPVHGGAALTVRDPGNVIHSADLDPTER 792

Query: 144  FFSSPASWR--KIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDG 200
             F + +  R  ++    +  + + + G  G   S       + + SG +  ++ V   DG
Sbjct: 793  TFVTSSEDRTVRVWDAATGALVRELRGHDGPVLSAAFSPDGTLIASGSLDKTVRVWRADG 852

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                 +      +L    ++P+ + V  ++ D+     V++     D +P R+      +
Sbjct: 853  TGTPLVFRGHGAVLTAVTWAPDGKAVISSSQDE---ASVHVWPL--DGSPPRVVRAGRPV 907

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
                 + +G   L+  ++   + ++  D +  A    L   LF   S + S D  +    
Sbjct: 908  FRAAVAPDGT--LLVPEQGGTLRLFGPDGEERAPFPALPEGLF---SVAVSRDGRRWALA 962

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            S  +G  ++Y    +GS    + +  E +  +  +SP G  +A     G 
Sbjct: 963  SS-DGTVRVY--PRDGSGDPLVLRAHEGAVGNAAFSPDGTELATVSADGT 1009



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 62/200 (31%), Gaps = 17/200 (8%)

Query: 241 LMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
           L       AP+ +G +  +      F+ +G+R +     D A  +    L      R L 
Sbjct: 431 LWRADGTGAPRVLGADGPARTDGLAFTPDGRRLV---TADHAGTLRVFPLDGGGAPRTLP 487

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                 +  +  P        +      +L++    G    R S   + +     +SP G
Sbjct: 488 AGGVPLVRLALDPAGRIAAAGAL---DGRLWLADLAGDAPPR-SVVHDGAVLALAFSPDG 543

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             +A     G    I      G+      +    + +  WSP GR +       G     
Sbjct: 544 TRVATGTADGFVRVIA--SPGGAVLATAPLPGGVVWSVAWSPDGRLVAV-----GSEDGV 596

Query: 418 LYSIDLNGRNETLINTPAYA 437
           +  +  +GR    +  P  A
Sbjct: 597 VRLLGPDGRVRQSLGAPGLA 616



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 80/228 (35%), Gaps = 15/228 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L   D  GA  R L            F+P+ +++   T D    LRV+ +D        
Sbjct: 430 RLWRADGTGA-PRVLGADGPARTDGLAFTPDGRRL--VTADHAGTLRVFPLDGGGAPRTL 486

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             G    + LA      G R   +   D    ++  DL  +A  R        ++ ++SP
Sbjct: 487 PAGGVPLVRLA--LDPAG-RIAAAGALDGR--LWLADLAGDAPPRSVVHDGAVLALAFSP 541

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D +++      +G   + V+ S G      +       +   WSP G L+A     G   
Sbjct: 542 DGTRVA-TGTADGF--VRVIASPGGAVLATAPLPGGVVWSVAWSPDGRLVAVGSEDG--- 595

Query: 372 AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            + ++  DG   + L      + +  +  +G  ++   +       +L
Sbjct: 596 VVRLLGPDGRVRQSLGAPGLAVSSVAFDRAGTRVVAGSQDGAARVWRL 643



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 70/218 (32%), Gaps = 19/218 (8%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D              +  P+ + +          S +G     +  +     ++  D  +
Sbjct: 380 DPPPRAVAIAQRLLSEPIPETVLDGVPKGEGLAVSPDGAWVA-AGGEGGGARLWRAD-GT 437

Query: 292 NATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            A   L  +        +++PD  ++V  +D  G   L V   +G    R          
Sbjct: 438 GAPRVLGADGPARTDGLAFTPDGRRLV-TADHAGT--LRVFPLDGGGAPRTLPAGGVPLV 494

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLI---- 405
                P G + A     G    + +    G +  R +V D  + A  +SP G  +     
Sbjct: 495 RLALDPAGRIAAAGALDG---RLWLADLAGDAPPRSVVHDGAVLALAFSPDGTRVATGTA 551

Query: 406 --FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             F R      G+ L +  L G    ++ + A++ D +
Sbjct: 552 DGFVRVIASPGGAVLATAPLPGG---VVWSVAWSPDGR 586


>gi|153873535|ref|ZP_02002086.1| Serine/Threonine protein kinase with WD40 repeats [Beggiatoa sp.
           PS]
 gi|152070000|gb|EDN67915.1| Serine/Threonine protein kinase with WD40 repeats [Beggiatoa sp.
           PS]
          Length = 369

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 85/245 (34%), Gaps = 15/245 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + + +   +     + +  +    FSP  + +A       +   + L +  
Sbjct: 102 SGSEDETIKLWNVNTGEVLRTLKAHNFWVTSVTFSPYGKILA----SGGEDHIINLWEVG 157

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +    +   ++ + +  FS +G+    S   D  + ++ +         L        
Sbjct: 158 TGKKLHALKGHKNAVTSVTFSPDGRFLA-SSSWDRDIHLWEI-ATGRKVRTLKGHRRNVP 215

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++SP+   +   S     + L +       + R  +          +SP G  +A   
Sbjct: 216 FVTFSPNGKMLASAS---WDKTLRLWDVRTGKKLRTLRGHRGWLNTVAFSPDGKTLASGS 272

Query: 366 FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  +  + K G + R+L    S + + ++S  G+ L        D   +L++++  
Sbjct: 273 LD-RTIRLWDVDKKGKRSRVLRGHRSAVMSVSFSNDGKILA---SGSLDKTIRLWNVE-T 327

Query: 425 GRNET 429
           G+ E 
Sbjct: 328 GKLER 332



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 80/227 (35%), Gaps = 13/227 (5%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                  + +    FSP+ + +A  + D+     + L +       + +      + +  
Sbjct: 79  RTLKGHGRNVTSIAFSPDGKMLASGSEDE----TIKLWNVNTGEVLRTLKAHNFWVTSVT 134

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS  GK  L S  +D  ++++ V         L        S ++SPD     F +    
Sbjct: 135 FSPYGK-ILASGGEDHIINLWEV-GTGKKLHALKGHKNAVTSVTFSPDGR---FLASSSW 189

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              +++ +     + R  +    +     +SP G ++A   +  +   +  ++       
Sbjct: 190 DRDIHLWEIATGRKVRTLKGHRRNVPFVTFSPNGKMLASASWD-KTLRLWDVRTGKKLRT 248

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           L      L    +SP G++L        D   +L+ +D  G+   ++
Sbjct: 249 LRGHRGWLNTVAFSPDGKTLA---SGSLDRTIRLWDVDKKGKRSRVL 292



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 81/200 (40%), Gaps = 21/200 (10%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + +      + +  FS +GK    S  +DE + +++V+        L    F   S ++S
Sbjct: 79  RTLKGHGRNVTSIAFSPDGKMLA-SGSEDETIKLWNVN-TGEVLRTLKAHNFWVTSVTFS 136

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           P    +       G++ +  +   G+ +K    +  + +     +SP G  +A + +  +
Sbjct: 137 PYGKILA----SGGEDHIINLWEVGTGKKLHALKGHKNAVTSVTFSPDGRFLASSSWDRD 192

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              I + +    ++   ++      P  T+SP+G+ L  +     D   +L+ +    + 
Sbjct: 193 ---IHLWEIATGRKVRTLKGHRRNVPFVTFSPNGKMLASASW---DKTLRLWDVRTGKKL 246

Query: 428 ETL------INTPAYASDPQ 441
            TL      +NT A++ D +
Sbjct: 247 RTLRGHRGWLNTVAFSPDGK 266



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 50/143 (34%), Gaps = 12/143 (8%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           L S     L        S ++SPD   +   S+    E + +   N  +  R  +     
Sbjct: 73  LPSKVLRTLKGHGRNVTSIAFSPDGKMLASGSE---DETIKLWNVNTGEVLRTLKAHNFW 129

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIF 406
                +SP G ++A     GE   I + +    +    L    + + + T+SP GR L  
Sbjct: 130 VTSVTFSPYGKILA---SGGEDHIINLWEVGTGKKLHALKGHKNAVTSVTFSPDGRFLAS 186

Query: 407 SRKKDGDTGSKLYSIDLNGRNET 429
           S     D    L+ I   GR   
Sbjct: 187 SSW---DRDIHLWEI-ATGRKVR 205



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 63/163 (38%), Gaps = 34/163 (20%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVS 186
            RLWDV+  K++                        +++ G +G  N+       +++ S
Sbjct: 235 LRLWDVRTGKKL------------------------RTLRGHRGWLNTVAFSPDGKTLAS 270

Query: 187 GIIKNSLCVMDRD--GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           G +  ++ + D D  G   R L   R  ++    FS + + +A  + D      + L + 
Sbjct: 271 GSLDRTIRLWDVDKKGKRSRVLRGHRSAVMSV-SFSNDGKILASGSLDK----TIRLWNV 325

Query: 245 RIDRAPKRIGNFRSMILAPRFSS--NGKRALISVQKDEAMDIY 285
              +  + +      IL+  F+   N +  L S  +D+ + ++
Sbjct: 326 ETGKLERTLKGHWGHILSVSFNPNDNSRSVLASGSEDKTIKLW 368


>gi|291566054|dbj|BAI88326.1| serine/threonine protein kinase with WD-40 repeats [Arthrospira
           platensis NIES-39]
          Length = 770

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 87/262 (33%), Gaps = 23/262 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG    ++ + D     +R         +    FS + Q +   + D+     + L
Sbjct: 501 QTLASGSSDKTIKLWDVTTGKLRETLTGHSDWVSSVAFSRDGQTLCSGSGDN----TIKL 556

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D    +  + +      + +  FS +G     S   D+ + ++  D+++      LT  
Sbjct: 557 WDVTTGKLRETLTGHPDWVRSVAFSRDGHTLA-SGSFDKTIKLW--DVRTGKVRHTLTGH 613

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++S D   +   S     + + + +      +              +S  G  
Sbjct: 614 SDRVYSVAFSRDGQTLASGSS---DKTIKLWEVKTGKLRETLTGHSDWVRSVAFSRDGKT 670

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A   F      + +      Q R  +      + +  +S  G++L        D   KL
Sbjct: 671 LASASFDKT---VKLWDVRTGQLRHTLTGHYGWVWSVAFSRDGQTLA---SGSLDNTIKL 724

Query: 419 YSIDLNGRNETLINTPAYASDP 440
           + +    R   L +T    SDP
Sbjct: 725 WDV----RTGKLRHTLTGHSDP 742



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 80/242 (33%), Gaps = 19/242 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           ++         ++   FSP+ Q +A  + D      + L D    +  + +      + +
Sbjct: 480 LQKTLMGHSNSVYSVAFSPDNQTLASGSSDK----TIKLWDVTTGKLRETLTGHSDWVSS 535

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
             FS +G+    S   D  + ++  D+ +      LT       S ++S D   +   S 
Sbjct: 536 VAFSRDGQTLC-SGSGDNTIKLW--DVTTGKLRETLTGHPDWVRSVAFSRDGHTLASGSF 592

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               + + +        +          +   +S  G  +A +  S +   +  +K    
Sbjct: 593 ---DKTIKLWDVRTGKVRHTLTGHSDRVYSVAFSRDGQTLA-SGSSDKTIKLWEVKTGKL 648

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +E L      +++  +S  G++L        D   KL+ +       TL     +     
Sbjct: 649 RETLTGHSDWVRSVAFSRDGKTLA---SASFDKTVKLWDVRTGQLRHTLTGHYGWV---- 701

Query: 442 WV 443
           W 
Sbjct: 702 WS 703



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 80/257 (31%), Gaps = 36/257 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G     +  +LWDV   K  + +     P   R +A               G  
Sbjct: 542 GQTLCSGSGDNTI--KLWDVTTGK--LRETLTGHPDWVRSVA-----------FSRDG-- 584

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    ++ SG    ++ + D     +R+        ++   FS + Q +A  + D 
Sbjct: 585 --------HTLASGSFDKTIKLWDVRTGKVRHTLTGHSDRVYSVAFSRDGQTLASGSSDK 636

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L + +  +  + +      + +  FS +GK    S   D+ + ++  D+++  
Sbjct: 637 ----TIKLWEVKTGKLRETLTGHSDWVRSVAFSRDGKTLA-SASFDKTVKLW--DVRTGQ 689

Query: 294 TER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               LT       S ++S D   +   S       + +        +             
Sbjct: 690 LRHTLTGHYGWVWSVAFSRDGQTLASGSL---DNTIKLWDVRTGKLRHTLTGHSDPVNSV 746

Query: 353 VWSPQGDLIAFTKFSGE 369
            +S  G  +A       
Sbjct: 747 AFSQDGQTLASGSGDNT 763


>gi|189347641|ref|YP_001944170.1| hypothetical protein Clim_2167 [Chlorobium limicola DSM 245]
 gi|189341788|gb|ACD91191.1| WD-40 repeat protein [Chlorobium limicola DSM 245]
          Length = 316

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 87/239 (36%), Gaps = 19/239 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   +++ + D    N  ++    D  +    FSP+ + +A  + D      + L D  
Sbjct: 93  SGSTDSTVRIWDPATGNCVHVCKGHDTAVRMVAFSPDSRVLASCSRDT----TIRLWDVE 148

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R   R    +S I    +S +GK+        E   I   D+ S   + + N    + 
Sbjct: 149 TGRETARFLGHKSYIECLAWSHDGKKIA---SCGEEPVIKIWDVASG--KNIANYQTGDT 203

Query: 306 ---SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              +  +SPD S+I F        ++ ++ +   +  ++    E       ++P G  +A
Sbjct: 204 LSHAVVFSPDDSRIAFC---GRDAKVKILDAATGEILKVLVGHEDGVRSVCFNPDGSAVA 260

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +  + E   +  +K              +Q+   SP GR +        D   KL+ I
Sbjct: 261 -SAANDESVRLWDVKSGALLHTYRGHTHEVQSVDISPDGRVIASGSD---DFKIKLWGI 315



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 65/208 (31%), Gaps = 16/208 (7%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N+          +   +F+ +  K+    +D+     V L D    +    +    + + 
Sbjct: 25  NLIKTMEGHQDRVLGVKFNADGTKLVSGGFDE----LVMLWDVATGKPLHTMKGHETWVE 80

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES 320
              +S +G+    S   D  + I+  D  +     +       +   ++SPDS  +   S
Sbjct: 81  CIDYSRDGRWLA-SGSTDSTVRIW--DPATGNCVHVCKGHDTAVRMVAFSPDSRVLASCS 137

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + +       +       ++      WS  G  IA     GE+  I +     
Sbjct: 138 R---DTTIRLWDVETGRETARFLGHKSYIECLAWSHDGKKIASC---GEEPVIKIWDVAS 191

Query: 381 SQ--ERLLVEDSNLQAPTWSPSGRSLIF 406
            +        D+   A  +SP    + F
Sbjct: 192 GKNIANYQTGDTLSHAVVFSPDDSRIAF 219



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 69/196 (35%), Gaps = 33/196 (16%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWDV+  ++           + R + H    +        K     +I    E  V  
Sbjct: 142 IRLWDVETGRE-----------TARFLGHKSYIECLAWSHDGK-----KIASCGEEPV-- 183

Query: 188 IIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                + + D   G NI     + D +     FSP+  ++A+   D +    V ++D   
Sbjct: 184 -----IKIWDVASGKNIAN-YQTGDTLSHAVVFSPDDSRIAFCGRDAK----VKILDAAT 233

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI- 305
               K +      + +  F+ +G     S   DE++ ++  D++S A           + 
Sbjct: 234 GEILKVLVGHEDGVRSVCFNPDGSAVA-SAANDESVRLW--DVKSGALLHTYRGHTHEVQ 290

Query: 306 SASYSPDSSQIVFESD 321
           S   SPD   I   SD
Sbjct: 291 SVDISPDGRVIASGSD 306


>gi|75909286|ref|YP_323582.1| peptidase C14 [Anabaena variabilis ATCC 29413]
 gi|75703011|gb|ABA22687.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 1711

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 87/220 (39%), Gaps = 18/220 (8%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               +++ + +RDG  +R L P  +  +    FSP+ Q +A  + D    ++++ ++    
Sbjct: 1453 SPDHTIHLYNRDGILLRSL-PGHNHWITSLSFSPDNQILASGSAD--KTIKLWSVN---G 1506

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            R  K +      +   +FS++GK  + S   D+ + I+S+D        L        S 
Sbjct: 1507 RLLKTLSGHNGWVTDIKFSADGKNIV-SASADKTIKIWSLD--GKLIRTLQGHSASVWSV 1563

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            ++SPD   +   S     E + +   +G     +    +  Y +  +SP    IA     
Sbjct: 1564 NFSPDGQTLASTSQ---DETIKLWNLDGELIYTLRGHGDVVY-NLSFSPDSKTIASASDD 1619

Query: 368  GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
            G    I +            +     +++ ++SP G+ L 
Sbjct: 1620 GT---IKLWNVTHGTLLKTFQGHRGGVRSVSFSPDGKILA 1656



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 88/240 (36%), Gaps = 20/240 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG   +++ +  R+G  +       DQ +    FSPN + +A           + L    
Sbjct: 1164 SGSADSTIKLWQRNGK-LITTLKGHDQGVKSVSFSPNGEIIA----SGGSDNTINLWSRA 1218

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                    G+ + +  + +FS  G     S   D  + ++S+D        + +     +
Sbjct: 1219 GKLLLSLNGHSQGVN-SVKFSPEGDTIA-SASDDGTIRLWSLD--GRPLITIPSHTKQVL 1274

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S S+SPD   I       G +    + S      +  +    + +  ++SP G LIA   
Sbjct: 1275 SISFSPDGQTIA----SAGADNTVKLWSRNGTLLKTLEGHNEAVWQVIFSPDGQLIATAS 1330

Query: 366  FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                   I +  +DG+        +  + + ++SP G +L        D   +L++++  
Sbjct: 1331 ADKT---ITLWSRDGNILGTFAGHNHEVNSLSFSPDGNTLASGSD---DNTVRLWTVNRT 1384



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 88/235 (37%), Gaps = 20/235 (8%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               +++ +   DG  ++ L+     +     F+P+   VA A+ D         +  R  
Sbjct: 1412 STDSTMKIWSLDGKLLQTLSSPLPDVTSV-SFTPDNNIVALASPDH-----TIHLYNRDG 1465

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
               + +      I +  FS +  + L S   D+ + ++SV+      + L+         
Sbjct: 1466 ILLRSLPGHNHWITSLSFSPD-NQILASGSADKTIKLWSVN--GRLLKTLSGHNGWVTDI 1522

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +S D   IV  S     + + +   +G   + + Q   AS +   +SP G  +A T   
Sbjct: 1523 KFSADGKNIVSAS---ADKTIKIWSLDGKLIRTL-QGHSASVWSVNFSPDGQTLASTSQD 1578

Query: 368  GEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 I +   DG     L    ++    ++SP  +++  +     D   KL+++
Sbjct: 1579 ET---IKLWNLDGELIYTLRGHGDVVYNLSFSPDSKTIASASD---DGTIKLWNV 1627



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 87/243 (35%), Gaps = 22/243 (9%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            + +  S      L  ++R    +          +   +FS + QK+   +   +  ++++
Sbjct: 1366 TLASGSDDNTVRLWTVNRT---LPKTFYGHKGSVSYVKFSNDGQKI--TSLSTDSTMKIW 1420

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +D    +  + + +    + +  F+ +     ++        I+  +        L   
Sbjct: 1421 SLD---GKLLQTLSSPLPDVTSVSFTPDNNIVALAS---PDHTIHLYNRDGILLRSLPGH 1474

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S S+SPD+  +   S     + + +   NG   K +S        D  +S  G  
Sbjct: 1475 NHWITSLSFSPDNQILASGS---ADKTIKLWSVNGRLLKTLS-GHNGWVTDIKFSADGKN 1530

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            I           I +   DG   R L    +++ +  +SP G++L  + +   D   KL+
Sbjct: 1531 IVSASADKT---IKIWSLDGKLIRTLQGHSASVWSVNFSPDGQTLASTSQ---DETIKLW 1584

Query: 420  SID 422
            ++D
Sbjct: 1585 NLD 1587



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 82/237 (34%), Gaps = 30/237 (12%)

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             +  +    +SP+ + +A  + D+     ++L            G+   +  +  FS +G
Sbjct: 1105 HNAWVTSVSYSPDGEVIASGSVDN----TIHLWRRDGKLLTTLTGHNDGVN-SVSFSPDG 1159

Query: 270  KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDREGKE 326
            +    S   D  + ++         + +T     +    S S+SP+   I       G +
Sbjct: 1160 EIIA-SGSADSTIKLWQ-----RNGKLITTLKGHDQGVKSVSFSPNGEIIA----SGGSD 1209

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RL 385
                + S                    +SP+GD IA     G    I +   DG     +
Sbjct: 1210 NTINLWSRAGKLLLSLNGHSQGVNSVKFSPEGDTIASASDDGT---IRLWSLDGRPLITI 1266

Query: 386  LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                  + + ++SP G+++        D   KL+S     RN TL+ T    ++  W
Sbjct: 1267 PSHTKQVLSISFSPDGQTIA---SAGADNTVKLWS-----RNGTLLKTLEGHNEAVW 1315



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 43/116 (37%), Gaps = 8/116 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ S     ++ + + DG  + Y       +++   FSP+ + +A A+ D      + L
Sbjct: 1570 QTLASTSQDETIKLWNLDGE-LIYTLRGHGDVVYNLSFSPDSKTIASASDDG----TIKL 1624

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             +       K     R  + +  FS +GK             I   +L+    + L
Sbjct: 1625 WNVTHGTLLKTFQGHRGGVRSVSFSPDGKILA---SGGHDTTIKVWNLEGIELQTL 1677



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 39/99 (39%), Gaps = 12/99 (12%)

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQA 394
            S Q+R      A      +SP G++IA          I + ++DG     L   +  + +
Sbjct: 1096 STQERNRLLHNAWVTSVSYSPDGEVIASGSVDNT---IHLWRRDGKLLTTLTGHNDGVNS 1152

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             ++SP G  +        D+  KL+      RN  LI T
Sbjct: 1153 VSFSPDGEIIA---SGSADSTIKLWQ-----RNGKLITT 1183


>gi|88603682|ref|YP_503860.1| hypothetical protein Mhun_2440 [Methanospirillum hungatei JF-1]
 gi|88189144|gb|ABD42141.1| PKD [Methanospirillum hungatei JF-1]
          Length = 1042

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 92/259 (35%), Gaps = 15/259 (5%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     D + RI+   ++        ++   D        ++ S      +P  S   +
Sbjct: 139 KLHQTNPDISGRIVVYEQAGAGSNQVTNINGYDLQTDTAAPISSSTSNQN-QPVVS--GR 195

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +A+  +   +   +Y+ D       + +    +    P  S  G   +    ++   DI
Sbjct: 196 YIAWQDWRSGNP-DIYMADLNSGT-SQAVTKDLAEQKRPDIS--GSYIIWEDWRNGNADI 251

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           Y  D+ +    +LTN      +   S     +V+E +R G   +Y M  +   + +++  
Sbjct: 252 YLYDITAGKEYQLTNDRSDQRNPRIS--GKIVVWEDNRNGISDIYAMTLDTFQEYQLTDS 309

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRS 403
           K  +    V  P   L+ +  +      I ++    G   ++     + + P+    G  
Sbjct: 310 KYKAVNPDVSGP---LVVWEDYRNGNADIYLLDLITGYIYQVTTNQGDQKNPSI--YGNH 364

Query: 404 LIFSRKKDGDTGSKLYSID 422
           L++   + G++   LY+  
Sbjct: 365 LVWQDYRTGNSNIFLYTFS 383



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 72/200 (36%), Gaps = 16/200 (8%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             A K+I       + P+ S +G R +          I   D+QS     +        +
Sbjct: 87  GGAEKQITFGNLNHINPKVS-DG-RVVFEEWNAGVSGIGLYDIQSGGLYPVYPGKLHQTN 144

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGDLIA 362
              S     +V+E    G  Q  V   NG D +  +        ++   PV S  G  IA
Sbjct: 145 PDIS--GRIVVYEQAGAGSNQ--VTNINGYDLQTDTAAPISSSTSNQNQPVVS--GRYIA 198

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +  +      I +   +    + + +D +  + P  S  G  +I+   ++G+    LY I
Sbjct: 199 WQDWRSGNPDIYMADLNSGTSQAVTKDLAEQKRPDIS--GSYIIWEDWRNGNADIYLYDI 256

Query: 422 DLNGRNETLINTPAYASDPQ 441
              G+   L N  +   +P+
Sbjct: 257 TA-GKEYQLTNDRSDQRNPR 275


>gi|307151562|ref|YP_003886946.1| periplasmic component of the Tol biopolymer transporter-like
           protein [Cyanothece sp. PCC 7822]
 gi|306981790|gb|ADN13671.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Cyanothece sp. PCC 7822]
          Length = 174

 Score = 83.9 bits (206), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 48/127 (37%), Gaps = 4/127 (3%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISASYS 310
           N R     P  S +G+       ++    I   DLQ+    +L     +   I  S S S
Sbjct: 28  NSRYNDEQPTLSGDGRLLAFVSNRNGKSQIVLYDLQARQFRQLRGFEPSGGAIAESPSLS 87

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
                +V+ S  +G+  + +        + ++Q+  +   +P  SP G  I F      +
Sbjct: 88  RTGRYLVYISSIQGRPDIILYDQATGRSELLTQNYRSWLRNPNISPDGRYIVFETARRGQ 147

Query: 371 FAIGVMK 377
           + + V+ 
Sbjct: 148 WDVEVLD 154



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 54/148 (36%), Gaps = 7/148 (4%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---QDKEASYFDPVWS 355
           N+ + +   + S D   + F S+R GK Q+ +        +++        A    P  S
Sbjct: 28  NSRYNDEQPTLSGDGRLLAFVSNRNGKSQIVLYDLQARQFRQLRGFEPSGGAIAESPSLS 87

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGD 413
             G  + +      +  I +  +   +  LL ++       P  SP GR ++F   + G 
Sbjct: 88  RTGRYLVYISSIQGRPDIILYDQATGRSELLTQNYRSWLRNPNISPDGRYIVFETARRGQ 147

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQ 441
              ++  +D     E  I       +PQ
Sbjct: 148 WDVEV--LDRGPLVELDIPDGTRVPNPQ 173



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 55/140 (39%), Gaps = 7/140 (5%)

Query: 199 DGANIRYLTPSRDQ--ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D  N   L    +      +P  S + + +A+ +  +    ++ L D +  +  +  G  
Sbjct: 16  DFTNGPQLLSGLNSRYNDEQPTLSGDGRLLAFVSNRNGKS-QIVLYDLQARQFRQLRGFE 74

Query: 257 RS---MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPD 312
            S   +  +P  S  G+  +         DI   D  +  +E LT N      + + SPD
Sbjct: 75  PSGGAIAESPSLSRTGRYLVYISSIQGRPDIILYDQATGRSELLTQNYRSWLRNPNISPD 134

Query: 313 SSQIVFESDREGKEQLYVMQ 332
              IVFE+ R G+  + V+ 
Sbjct: 135 GRYIVFETARRGQWDVEVLD 154



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 13/114 (11%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWS 398
           +   +   P  S  G L+AF      K  I +      Q R L        +  ++P+ S
Sbjct: 28  NSRYNDEQPTLSGDGRLLAFVSNRNGKSQIVLYDLQARQFRQLRGFEPSGGAIAESPSLS 87

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGF 445
            +GR L++     G     LY     GR+E L          P  + D +++ F
Sbjct: 88  RTGRYLVYISSIQGRPDIILYD-QATGRSELLTQNYRSWLRNPNISPDGRYIVF 140



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 38/112 (33%), Gaps = 2/112 (1%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           L    S  +G  +  L  +        R   PS   I   P  S   + + Y +      
Sbjct: 44  LLAFVSNRNGKSQIVLYDLQARQFRQLRGFEPSGGAIAESPSLSRTGRYLVYISSIQGRP 103

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + L D    R+     N+RS +  P  S +G+  +    +    D+  +D
Sbjct: 104 -DIILYDQATGRSELLTQNYRSWLRNPNISPDGRYIVFETARRGQWDVEVLD 154


>gi|315605485|ref|ZP_07880522.1| WD-40 repeat-containing protein [Actinomyces sp. oral taxon 180
           str. F0310]
 gi|315312752|gb|EFU60832.1| WD-40 repeat-containing protein [Actinomyces sp. oral taxon 180
           str. F0310]
          Length = 360

 Score = 83.5 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 82/237 (34%), Gaps = 18/237 (7%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            +  +    +SP+   +   + D     R++   T  +       ++   + A  +S +G
Sbjct: 5   HNTWVRAVAWSPDGHHILTGSGD--GTARIWNTTTGENTLTLPHADW---VTAVAWSPDG 59

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              L +  +D    ++  D  +              + ++SPD   I+    ++   +++
Sbjct: 60  HHIL-TASEDHTTRVW--DATTGENTLTLTHNTWVRAVAWSPDGHHIL-TGSQDATARIW 115

Query: 330 -VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LV 387
                  + + +++           WSP G  I      G      +      +  L L 
Sbjct: 116 DATTREDTPKPKLTLPHADWVRAVAWSPDGHHILTGSGDGTA---RIWNTTTGENTLTLT 172

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            ++ ++A  WSP G  ++      GD  +++++    G N   +    + +   W  
Sbjct: 173 HNTWVRAVAWSPDGHHIL---TGSGDGTARIWNT-TTGENTLTLTHTDWVTAVAWSP 225



 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 88/262 (33%), Gaps = 34/262 (12%)

Query: 199 DGANIRYLTPSRDQILFEP--------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           DG    + T + +  L  P         +SP+   +  A+ D     RV+   T  +   
Sbjct: 27  DGTARIWNTTTGENTLTLPHADWVTAVAWSPDGHHILTASED--HTTRVWDATTGENTLT 84

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE---RLT-NTLFINIS 306
                  + + A  +S +G   L +  +D    I+  D  +       +LT        +
Sbjct: 85  ---LTHNTWVRAVAWSPDGHHIL-TGSQDATARIW--DATTREDTPKPKLTLPHADWVRA 138

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPD   I+  S  +G  +++   +  + +  ++           WSP G  I     
Sbjct: 139 VAWSPDGHHILTGSG-DGTARIW---NTTTGENTLTLTHNTWVRAVAWSPDGHHILTGSG 194

Query: 367 SGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-- 423
            G      +      +  L L     + A  WSP G  ++ + +   D  ++++      
Sbjct: 195 DGTA---RIWNTTTGENTLTLTHTDWVTAVAWSPDGHHILTASR---DGTARIWDATTRE 248

Query: 424 -NGRNETLINTPAYASDPQWVG 444
              + +  +    +     W  
Sbjct: 249 DTPKPKLTLPHADWVRAVAWSP 270



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 102/261 (39%), Gaps = 20/261 (7%)

Query: 166 ITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPN 222
           +T    D+ + + +      +++    ++  V D   G N   LT + +  +    +SP+
Sbjct: 42  LTLPHADWVTAVAWSPDGHHILTASEDHTTRVWDATTGEN--TLTLTHNTWVRAVAWSPD 99

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
              +   + D     R++   TR D   PK        + A  +S +G   L +   D  
Sbjct: 100 GHHILTGSQDA--TARIWDATTREDTPKPKLTLPHADWVRAVAWSPDGHHIL-TGSGDGT 156

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             I++     N    LT+  ++   A +SPD   I+  S  +G  +++   +  + +  +
Sbjct: 157 ARIWNTTTGENTLT-LTHNTWVRAVA-WSPDGHHILTGSG-DGTARIW---NTTTGENTL 210

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLLVEDSNL-QAPTWSP 399
           +           WSP G  I      G         ++D  + +L +  ++  +A  WSP
Sbjct: 211 TLTHTDWVTAVAWSPDGHHILTASRDGTARIWDATTREDTPKPKLTLPHADWVRAVAWSP 270

Query: 400 SGRSLIFSRKKDGDTGSKLYS 420
            G  ++   +   D+ ++++ 
Sbjct: 271 DGTQILTGSQ---DSTARIWD 288



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 64/192 (33%), Gaps = 13/192 (6%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              + + A  +S +G   L +   D    I+  +  +              + ++SPD  
Sbjct: 4   THNTWVRAVAWSPDGHHIL-TGSGDGTARIW--NTTTGENTLTLPHADWVTAVAWSPDGH 60

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI- 373
            I+  S+    +    +    + +  ++           WSP G  I             
Sbjct: 61  HILTASE----DHTTRVWDATTGENTLTLTHNTWVRAVAWSPDGHHILTGSQDATARIWD 116

Query: 374 GVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              ++D  + +L +  ++  +A  WSP G  ++      GD  +++++    G N   + 
Sbjct: 117 ATTREDTPKPKLTLPHADWVRAVAWSPDGHHIL---TGSGDGTARIWNT-TTGENTLTLT 172

Query: 433 TPAYASDPQWVG 444
              +     W  
Sbjct: 173 HNTWVRAVAWSP 184



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 64/205 (31%), Gaps = 18/205 (8%)

Query: 186 SGIIKNSLCVMDR----DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +G    +  + D     D    +   P  D +     +SP+   +   + D     R++ 
Sbjct: 105 TGSQDATARIWDATTREDTPKPKLTLPHADWVRAV-AWSPDGHHILTGSGD--GTARIWN 161

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             T  +          + + A  +S +G   L +   D    I+  +  +          
Sbjct: 162 TTTGENTLT---LTHNTWVRAVAWSPDGHHIL-TGSGDGTARIW--NTTTGENTLTLTHT 215

Query: 302 FINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               + ++SPD   I+  + R+G  +++       + + +++           WSP G  
Sbjct: 216 DWVTAVAWSPDGHHIL-TASRDGTARIWDATTREDTPKPKLTLPHADWVRAVAWSPDGTQ 274

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERL 385
           I             +      ++  
Sbjct: 275 ILTGSQDSTA---RIWDATTGEQVR 296



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 32/104 (30%), Gaps = 8/104 (7%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPS 400
           +           WSP G  I      G      +      +  L +  ++   A  WSP 
Sbjct: 2   TLTHNTWVRAVAWSPDGHHILTGSGDGTA---RIWNTTTGENTLTLPHADWVTAVAWSPD 58

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           G  ++ + +   D  ++++     G N   +    +     W  
Sbjct: 59  GHHILTASE---DHTTRVWDA-TTGENTLTLTHNTWVRAVAWSP 98


>gi|159476014|ref|XP_001696109.1| hypothetical protein CHLREDRAFT_119580 [Chlamydomonas reinhardtii]
 gi|158275280|gb|EDP01058.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 291

 Score = 83.5 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 79/234 (33%), Gaps = 22/234 (9%)

Query: 182 ESVVSGIIKNSLCVMDR-----DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
            S+VSG    +L V D       G   R         +    FSP+ + V   + D    
Sbjct: 60  RSLVSGSEDKTLRVWDACQRGVQGHAQRTQQRGYQPAVSSVCFSPDGRSVVSGSEDK--- 116

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---ISVQKDEAMDIYSVDLQSNA 293
             + + D         +    S + +  FS +G+  +   +S    + + ++  D  S  
Sbjct: 117 -TLRVWDAASGECKATLSGHSSAVTSVCFSPDGRSLVSGTLSAAVGQTLRVW--DAASGD 173

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              L+       S  +SPD   +V  S+    + L V      + K       ++     
Sbjct: 174 VATLSGHSSAVTSVCFSPDGRSLVSGSE---DKTLRVWDPASGECKATLSGHSSAVTSVC 230

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
           +SP G  +           + V      + +  +    S + +  +SP G SL+
Sbjct: 231 FSPDGRSLVSGSEDKT---LRVWDVASRECKATLSGHSSAVTSVCFSPDGCSLV 281



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 86/231 (37%), Gaps = 16/231 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY- 240
            S+VSG    +L V D      +         +    FSP+ + +   + D    LRV+ 
Sbjct: 18  RSLVSGSEDKTLRVWDAASGECKATLSGHSSAVTSVCFSPDGRSLVSGSED--KTLRVWD 75

Query: 241 --LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RL 297
                 +      +   ++  + +  FS +G+  ++S  +D+ + ++  D  S   +  L
Sbjct: 76  ACQRGVQGHAQRTQQRGYQPAVSSVCFSPDGRS-VVSGSEDKTLRVW--DAASGECKATL 132

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +       S  +SPD   +V  +      Q L V  +   D   +S    ++     +SP
Sbjct: 133 SGHSSAVTSVCFSPDGRSLVSGTLSAAVGQTLRVWDAASGDVATLS-GHSSAVTSVCFSP 191

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
            G  +           + V      + +  +    S + +  +SP GRSL+
Sbjct: 192 DGRSLVSGSEDKT---LRVWDPASGECKATLSGHSSAVTSVCFSPDGRSLV 239



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 70/207 (33%), Gaps = 18/207 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ + +   + D      + + D         +    S + +  FS
Sbjct: 1   MQGHKNAVTSVCFSPDGRSLVSGSEDK----TLRVWDAASGECKATLSGHSSAVTSVCFS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFIN---ISASYSPDSSQIVFES 320
            +G+  + S  +D+ + ++  D      +   + T          S  +SPD   +V  S
Sbjct: 57  PDGRSLV-SGSEDKTLRVW--DACQRGVQGHAQRTQQRGYQPAVSSVCFSPDGRSVVSGS 113

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKD 379
           +    + L V  +   + K       ++     +SP G  +     S      + V    
Sbjct: 114 E---DKTLRVWDAASGECKATLSGHSSAVTSVCFSPDGRSLVSGTLSAAVGQTLRVWDAA 170

Query: 380 GSQERLLV-EDSNLQAPTWSPSGRSLI 405
                 L    S + +  +SP GRSL+
Sbjct: 171 SGDVATLSGHSSAVTSVCFSPDGRSLV 197



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 64/187 (34%), Gaps = 8/187 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SVVSG    +L V D      +         +    FSP+ + +   T        + +
Sbjct: 107 RSVVSGSEDKTLRVWDAASGECKATLSGHSSAVTSVCFSPDGRSLVSGTLSAAVGQTLRV 166

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
            D         +    S + +  FS +G+  + S  +D+ + ++  D  S   +  L+  
Sbjct: 167 WDAASGDVAT-LSGHSSAVTSVCFSPDGRSLV-SGSEDKTLRVW--DPASGECKATLSGH 222

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S  +SPD   +V  S+    + L V      + K       ++     +SP G  
Sbjct: 223 SSAVTSVCFSPDGRSLVSGSE---DKTLRVWDVASRECKATLSGHSSAVTSVCFSPDGCS 279

Query: 361 IAFTKFS 367
           +      
Sbjct: 280 LVSGSHD 286



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 48/150 (32%), Gaps = 5/150 (3%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D + ++     ++     ++    S D+           +        S+VSG    +L 
Sbjct: 147 DGRSLVSGTLSAAVGQTLRVWDAASGDVATLSGHSSAVTSVCFSPDGRSLVSGSEDKTLR 206

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V D      +         +    FSP+ + +   + D      + + D         + 
Sbjct: 207 VWDPASGECKATLSGHSSAVTSVCFSPDGRSLVSGSEDK----TLRVWDVASRECKATLS 262

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDI 284
              S + +  FS +G   + S   DE + +
Sbjct: 263 GHSSAVTSVCFSPDGCSLV-SGSHDETLRM 291


>gi|197106224|ref|YP_002131601.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Phenylobacterium
           zucineum HLK1]
 gi|196479644|gb|ACG79172.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Phenylobacterium
           zucineum HLK1]
          Length = 654

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 7/175 (4%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDRE 323
           FS +G+R LIS       ++Y++     A + LTN+      +AS+ P   +I+F +D+ 
Sbjct: 72  FSPDGQRILISSDATGVFNVYALPAAGGAPQPLTNSKTDATFAASWFPSDERILFTADQG 131

Query: 324 GK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAIGVMKKD 379
           G     LYV + +G   + ++  ++       W+  GD   +   +   + F +      
Sbjct: 132 GNELNHLYVREPDG-KVRDLTPGEKLKAQFLGWNAAGDTFYVGSNERDPQTFDVYAYSAK 190

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               RL+  +S       S  GR     + +     + LY  DL G  E  + TP
Sbjct: 191 DYARRLVFRNSGYTVGAISRDGRRAALVKARS-SADNDLYLADLEGGGEPKLITP 244



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 57/267 (21%), Positives = 100/267 (37%), Gaps = 15/267 (5%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + RILF ++    G   N L V + DG  +R LTP          ++       Y   ++
Sbjct: 121 DERILFTADQG--GNELNHLYVREPDGK-VRDLTPGEKLKAQFLGWNAAGDT-FYVGSNE 176

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSN 292
            D     +         +R+    S       S +G+RA +   +  A  D+Y  DL+  
Sbjct: 177 RDPQTFDVYAYSAKDYARRLVFRNSGYTVGAISRDGRRAALVKARSSADNDLYLADLEGG 236

Query: 293 ATERLTNTLFINISAS---YSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQ-DKEA 347
              +L      NI  +   ++PDS  +V+ +D  G+  Q +     G  +  + Q D + 
Sbjct: 237 GEPKLITPHQGNIEHTVYGFTPDSQALVYGTDEHGEFTQAWRYDLAGGAKTPLIQADWDV 296

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIF 406
            Y    WS  G        +    A+ +    G    L      +L +  +S   R + F
Sbjct: 297 MYVIHGWS--GRYRVHAVNADASTAVTITDAAGRPVTLSGAPAGDLGSVRFSGDERRIAF 354

Query: 407 SRKKDGDTGSKLYSIDL-NGRNETLIN 432
           +   D  + + ++  DL +GR   L  
Sbjct: 355 TVASD-TSPADVFVADLADGRARRLTT 380



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 86/249 (34%), Gaps = 16/249 (6%)

Query: 201 ANIRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             +R    + +  +  P    FSP+ Q++  ++ D   +  VY +      AP+ + N +
Sbjct: 51  YPVREFFETTNYRMAAPAGYGFSPDGQRILISS-DATGVFNVYALP-AAGGAPQPLTNSK 108

Query: 258 S-MILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISAS-YSPDS 313
           +    A  +  + +R L +  +       +Y  +        LT    +      ++   
Sbjct: 109 TDATFAASWFPSDERILFTADQGGNELNHLYVREPDGK-VRDLTPGEKLKAQFLGWNAAG 167

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFA 372
                 S+    +   V   +  D  R    + + Y     S  G   A  K  S     
Sbjct: 168 DTFYVGSNERDPQTFDVYAYSAKDYARRLVFRNSGYTVGAISRDGRRAALVKARSSADND 227

Query: 373 IGVMKKDGSQER--LLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           + +   +G  E   +     N++     ++P  ++L++   + G+     +  DL G  +
Sbjct: 228 LYLADLEGGGEPKLITPHQGNIEHTVYGFTPDSQALVYGTDEHGEFTQA-WRYDLAGGAK 286

Query: 429 TLINTPAYA 437
           T +    + 
Sbjct: 287 TPLIQADWD 295



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 48/317 (15%), Positives = 96/317 (30%), Gaps = 44/317 (13%)

Query: 99  RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP--ASWRKIAH 156
           +F  WN+ G      G   ++ +      +   D   R       +         R+ A 
Sbjct: 159 QFLGWNAAG-DTFYVGSNERDPQTFDVYAYSAKDYARRLVFRNSGYTVGAISRDGRRAAL 217

Query: 157 ---TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
                S D    +   +G    +++    +   G I++++     D   + Y T    + 
Sbjct: 218 VKARSSADNDLYLADLEGGGEPKLI----TPHQGNIEHTVYGFTPDSQALVYGTDEHGEF 273

Query: 214 LFEPRFSPNQQ----------KVAYATYDDEDILRVYLMDTRI----------DRAPKRI 253
               R+                V Y  +      RV+ ++              R     
Sbjct: 274 TQAWRYDLAGGAKTPLIQADWDVMYVIHGWSGRYRVHAVNADASTAVTITDAAGRPVTLS 333

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTN--TLFIN----IS 306
           G     + + RFS + +R   +V  D +  D++  DL      RLT      I+    + 
Sbjct: 334 GAPAGDLGSVRFSGDERRIAFTVASDTSPADVFVADLADGRARRLTTALNPAIDEADLVE 393

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-K 365
           A+ +       F S    +    + +  G+   R        +  P    +   IA    
Sbjct: 394 ATIAR------FASYDGLQIPGVLYRPKGASAARPVPALVWVHGGPGGQSRRGYIAEVQN 447

Query: 366 FSGEKFAIGVMKKDGSQ 382
              + +A+ ++   GS 
Sbjct: 448 LVNKGYAVYMINNRGSS 464


>gi|254515673|ref|ZP_05127733.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [gamma proteobacterium NOR5-3]
 gi|219675395|gb|EED31761.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [gamma proteobacterium NOR5-3]
          Length = 696

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 76/201 (37%), Gaps = 29/201 (14%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINIS-ASYSPDSSQIVFES- 320
           + +       +      +I+      ++  ++   T+   IN+S   ++ D  ++VF   
Sbjct: 42  APDTPGLAFVLNDRGVRNIWYAGGPGDSARQITAFTDDDGINVSDLKFTADGKRLVFIRG 101

Query: 321 ---------------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
                           R G+  +YV+  +G + +++          P   P G  IA+  
Sbjct: 102 GSPNAAGELPNPASLTRGGEHAVYVIAVDGGEARKLDNG-----SGPSVHPSGGQIAYVN 156

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                ++I +   +   E L     ++ +  WSP G  L+F   +   +   +++ D +G
Sbjct: 157 ER-TVWSIALDDPEAKPEALFQARGSIGSLAWSPDGSRLLFRSNRGTHSYIGVWTPD-DG 214

Query: 426 RNETLINTPAYASD--PQWVG 444
           + E +  +P+   D  P W  
Sbjct: 215 QGEIVWLSPSVDRDLSPTWSP 235



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 81/253 (32%), Gaps = 37/253 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--- 274
            +SP+  ++ + +                      +       L+P +S +G++      
Sbjct: 186 AWSPDGSRLLFRSNRGTHSYIGVWTPDDGQGEIVWLSPSVDRDLSPTWSPDGRQLAFLRL 245

Query: 275 -----------SVQKDEAMDIYSVDLQSNATERL--------TNTLFINIS--ASYSPDS 313
                       +++D    I   D  +  +  +        +    I       +S D 
Sbjct: 246 PSPASDHFPFEPIREDLPWSIRVADPDTGTSVEVWRADKGHGSVHRGIEGGQQLFWSAD- 304

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KF 371
            +++F  ++ G  QLY + + G   K ++  +    +  + S     + +     +  + 
Sbjct: 305 DRLLFFWEKNGWNQLYSVAAKGGQPKHLTPGEFEIEYAALTS-DRRSLVYASNQDDIHRR 363

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSP----SGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            +  +   G Q R L     ++   W+P     G  + F R     T ++   I   G+ 
Sbjct: 364 HLWQVDTGGGQPRELTSGDGIE---WAPAPLADGG-IAFLRS-GATTPARAAVISRKGKI 418

Query: 428 ETLINTPAYASDP 440
           + L      A  P
Sbjct: 419 QGLATDTLPAGFP 431



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 91/294 (30%), Gaps = 63/294 (21%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY--------------- 228
                 +      D DG N+  L           +F+ + +++ +               
Sbjct: 65  GPGDSARQITAFTDDDGINVSDL-----------KFTADGKRLVFIRGGSPNAAGELPNP 113

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           A+        VY++        +++ N       P    +G +     ++   +   ++D
Sbjct: 114 ASLTRGGEHAVYVIAVD-GGEARKLDNGSG----PSVHPSGGQIAYVNER--TVWSIALD 166

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                 E L        S ++SPD S+++F S+R     + V   +    + +       
Sbjct: 167 DPEAKPEALFQARGSIGSLAWSPDGSRLLFRSNRGTHSYIGVWTPDDGQGEIVWLSPSVD 226

Query: 349 -YFDPVWSPQGDLIAFTK--------------FSGEKFAIGVMKKD-GSQERLLVEDSNL 392
               P WSP G  +AF +                   ++I V   D G+   +   D   
Sbjct: 227 RDLSPTWSPDGRQLAFLRLPSPASDHFPFEPIREDLPWSIRVADPDTGTSVEVWRADKGH 286

Query: 393 QAP----------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            +            WS   R L F  K      ++LYS+   G     + TP  
Sbjct: 287 GSVHRGIEGGQQLFWSADDRLLFFWEKNG---WNQLYSVAAKGGQPKHL-TPGE 336



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 46/140 (32%), Gaps = 5/140 (3%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + + + +    +++              PK +      I     +S+ +  + +  +
Sbjct: 301 WSADDRLLFFW---EKNGWNQLYSVAAKGGQPKHLTPGEFEIEYAALTSDRRSLVYASNQ 357

Query: 279 DE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D+     ++ VD        LT+   I  + +   D       S      +  V+   G 
Sbjct: 358 DDIHRRHLWQVDTGGGQPRELTSGDGIEWAPAPLADGGIAFLRSGATTPARAAVISRKGK 417

Query: 337 DQKRISQDKEASYFDPVWSP 356
            Q   +    A + D + +P
Sbjct: 418 IQGLATDTLPAGFPDDLVTP 437


>gi|145509981|ref|XP_001440929.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408157|emb|CAK73532.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2569

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 82/206 (39%), Gaps = 16/206 (7%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            +N  +        +    FSP+   +A  +YD+     + L D +  +   ++    + +
Sbjct: 2290 SNDLHSLIGHSSAVASVNFSPDGTILASGSYDN----SIRLWDVKTGQQKAKLDGHSNYV 2345

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFE 319
            ++  FS +      S   D ++ ++  D+++   + +L       +S ++SPD + +   
Sbjct: 2346 MSVNFSPDSTTLA-SGSYDNSIRLW--DVKTGQQKAKLDGHSNYVMSVNFSPDGTTLASG 2402

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            S     + +++       QK        + +   +SP G  +A   +      I +    
Sbjct: 2403 SY---DKSIHLWDVKTGQQKAKFDGHSNTVYSVNFSPDGTTLASGSYDNS---IRLWDVK 2456

Query: 380  GSQERLLVEDSN--LQAPTWSPSGRS 403
              Q++ ++E  +  +++  +SP  + 
Sbjct: 2457 TGQQKPILEGHSRCVRSVCFSPDAKM 2482



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 75/203 (36%), Gaps = 11/203 (5%)

Query: 159  SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            S+D++  I       +         + SG   NS+ + D      +         +    
Sbjct: 2290 SNDLHSLIGHSSAVASVNFSPDGTILASGSYDNSIRLWDVKTGQQKAKLDGHSNYVMSVN 2349

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+   +A  +YD+     + L D +  +   ++    + +++  FS +G     S   
Sbjct: 2350 FSPDSTTLASGSYDN----SIRLWDVKTGQQKAKLDGHSNYVMSVNFSPDGTTLA-SGSY 2404

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+++ ++  D+++   +   +     + S ++SPD + +   S       + +       
Sbjct: 2405 DKSIHLW--DVKTGQQKAKFDGHSNTVYSVNFSPDGTTLASGSY---DNSIRLWDVKTGQ 2459

Query: 338  QKRISQDKEASYFDPVWSPQGDL 360
            QK I +          +SP   +
Sbjct: 2460 QKPILEGHSRCVRSVCFSPDAKM 2482



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 66/199 (33%), Gaps = 31/199 (15%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        RLWDVK  +Q                 H  S+ +              
Sbjct: 2313 TILASGSYDNSIRLWDVKTGQQKAKLD-----------GH--SNYVMSVNFSPD------ 2353

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                S ++ SG   NS+ + D      +         +    FSP+   +A  +YD    
Sbjct: 2354 ----STTLASGSYDNSIRLWDVKTGQQKAKLDGHSNYVMSVNFSPDGTTLASGSYDK--- 2406

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              ++L D +  +   +     + + +  FS +G     S   D ++ ++  D+++   + 
Sbjct: 2407 -SIHLWDVKTGQQKAKFDGHSNTVYSVNFSPDGTTLA-SGSYDNSIRLW--DVKTGQQKP 2462

Query: 297  LTNTLFINI-SASYSPDSS 314
            +       + S  +SPD+ 
Sbjct: 2463 ILEGHSRCVRSVCFSPDAK 2481



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 68/182 (37%), Gaps = 16/182 (8%)

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSP 311
            +    S + +  FS +G   L S   D ++ ++  D+++   + +L       +S ++SP
Sbjct: 2296 LIGHSSAVASVNFSPDGT-ILASGSYDNSIRLW--DVKTGQQKAKLDGHSNYVMSVNFSP 2352

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            DS+ +   S       + +       QK              +SP G  +A   +     
Sbjct: 2353 DSTTLASGSY---DNSIRLWDVKTGQQKAKLDGHSNYVMSVNFSPDGTTLASGSYDKS-- 2407

Query: 372  AIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             I +      Q++   +  +    +  +SP G +L        D   +L+ +   G+ + 
Sbjct: 2408 -IHLWDVKTGQQKAKFDGHSNTVYSVNFSPDGTTLASGSY---DNSIRLWDVK-TGQQKP 2462

Query: 430  LI 431
            ++
Sbjct: 2463 IL 2464



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 44/136 (32%), Gaps = 11/136 (8%)

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +LQSN    L        S ++SPD + +   S       + +       QK        
Sbjct: 2287 NLQSNDLHSLIGHSSAVASVNFSPDGTILASGSY---DNSIRLWDVKTGQQKAKLDGHSN 2343

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
                  +SP    +A   +      I +      Q++  ++  +    +  +SP G +L 
Sbjct: 2344 YVMSVNFSPDSTTLASGSYDNS---IRLWDVKTGQQKAKLDGHSNYVMSVNFSPDGTTLA 2400

Query: 406  FSRKKDGDTGSKLYSI 421
                   D    L+ +
Sbjct: 2401 SGSY---DKSIHLWDV 2413


>gi|20090401|ref|NP_616476.1| hypothetical protein MA1543 [Methanosarcina acetivorans C2A]
 gi|19915411|gb|AAM04956.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 576

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 54/284 (19%), Positives = 101/284 (35%), Gaps = 36/284 (12%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYL------------TPSRDQILFEPRFSPNQQKVA 227
           VS    +G     +   + DG N+R +                       ++SP+  K+A
Sbjct: 120 VSGYGPTGPGNCYIF-CNSDGTNLRGVGTNYTDLSKILENRGDIGSQRNLKWSPDSSKIA 178

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +      +      +          + +       P +  +GK  +  V  +  +D+ + 
Sbjct: 179 FEWQKPGNASTGVFIANGNGTNAHELSSATYPQ--PAWYDSGK--VFIVTDEGTVDLINE 234

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL--YVMQSNGSDQKR-ISQD 344
                 T +  +        S SPD  +I+  S       L  Y+  ++GS+ K  +S  
Sbjct: 235 SSDLIDTFQPEDKDEKYWGFSLSPDRKKILLVSGLPDSFDLHTYISDTDGSNLKGNVSFY 294

Query: 345 KEAS------YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
              +           W P G L+       +   + +++ + + +RLL E  N   P W 
Sbjct: 295 DGDNPEDTNILTKEYWQPNGSLLLV----NQNRNLYIVEGNENNKRLLYE-GNASEPQWF 349

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           P G+ ++F   K+     KLYSID++G N + I          W
Sbjct: 350 PDGKKILFVENKN-----KLYSIDIDGTNLSFITNFGPTPSHSW 388



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 90/259 (34%), Gaps = 40/259 (15%)

Query: 214 LFEPRFSPNQQKVAY--ATYDDEDILRVYLMDTRIDRAPKRIGNF----------RSMIL 261
           + + +++P+  K+ +  + Y        Y+         + +G            R  I 
Sbjct: 104 ILQAKWTPSGDKICFEVSGYGPTGPGNCYIFCNSDGTNLRGVGTNYTDLSKILENRGDIG 163

Query: 262 APR---FSSNGKRALISVQKDEAMD--IYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           + R   +S +  +     QK       ++  +        L++  +     ++       
Sbjct: 164 SQRNLKWSPDSSKIAFEWQKPGNASTGVFIANGNGTNAHELSSATYPQ--PAWYDSGK-- 219

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI--G 374
           VF    EG   L    S+  D  +  +DK+  Y+    SP    I       + F +   
Sbjct: 220 VFIVTDEGTVDLINESSDLIDTFQP-EDKDEKYWGFSLSPDRKKILLVSGLPDSFDLHTY 278

Query: 375 VMKKDGSQERLLVEDSNLQAP---------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +   DGS  +  V   +   P          W P+G  L+ ++ ++      LY ++ N 
Sbjct: 279 ISDTDGSNLKGNVSFYDGDNPEDTNILTKEYWQPNGSLLLVNQNRN------LYIVEGNE 332

Query: 426 RNETLINTPAYASDPQWVG 444
            N+ L+     AS+PQW  
Sbjct: 333 NNKRLL-YEGNASEPQWFP 350



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 88/276 (31%), Gaps = 53/276 (19%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-------ILFEPRFSPNQQKVA 227
            R   +  S +         + D DG+N++      D        IL +  + PN   + 
Sbjct: 259 DRKKILLVSGLPDSFDLHTYISDTDGSNLKGNVSFYDGDNPEDTNILTKEYWQPNGSLLL 318

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                +       L     +   KR+  +      P++  +GK+ L    K+    +YS+
Sbjct: 319 VNQNRN-------LYIVEGNENNKRLL-YEGNASEPQWFPDGKKILFVENKN---KLYSI 367

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D+       +TN         + P  S   + SD+  +  +Y           IS   + 
Sbjct: 368 DIDGTNLSFITN---------FGPTPSHSWYNSDKIDRFSIYS----------ISPSGDV 408

Query: 348 SYFDPVWSPQG--------DLIAFTKFSGEKFA-----IGVMKKDGSQERL---LVEDSN 391
             F    +P          D I  ++    K++     + ++  +GS         +   
Sbjct: 409 IVFASALNPDTGKFYKNETDKILESENDSSKYSSIAAPLFIVNCNGSSLTQVTPTTKGRF 468

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                W P G+           T  +   +DLN +N
Sbjct: 469 DMLRRWRPDGKQFTIESYSLYRTDWEDSLVDLNNQN 504



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 30/165 (18%)

Query: 306 SASYSPDSSQIVFE---SDREGKEQL--YVMQSNGSDQKRISQDKEASYFDPV----WSP 356
           S  +SPD   ++     SD      +  Y++ +N      I         + +    W+P
Sbjct: 52  STEWSPDVQYLLVTCSKSDSPSTNIVKHYLLDTNSHTFGEIDYGVHGPDTNGILQAKWTP 111

Query: 357 QGDLIAF-----TKFSGEKFAIGVMKKDGSQER-----------LLVEDSNLQAPT---W 397
            GD I F              I     DG+  R           +L    ++ +     W
Sbjct: 112 SGDKICFEVSGYGPTGPGNCYIF-CNSDGTNLRGVGTNYTDLSKILENRGDIGSQRNLKW 170

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           SP    + F  +K G+  + ++  + NG N   +++  Y   P W
Sbjct: 171 SPDSSKIAFEWQKPGNASTGVFIANGNGTNAHELSSATY-PQPAW 214


>gi|148655047|ref|YP_001275252.1| WD-40 repeat-containing protein [Roseiflexus sp. RS-1]
 gi|148567157|gb|ABQ89302.1| ribosome assembly protein 4 (RSA4) [Roseiflexus sp. RS-1]
          Length = 696

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 85/229 (37%), Gaps = 24/229 (10%)

Query: 186 SGIIKNSLCVMDR-DGANIRYL---TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           SG   +++ + D   G  +R L     S    ++   FSP+ + +A  + D+     + L
Sbjct: 469 SGARDSTVRLWDAASGQLLRTLKGHGSSHGSSVWSVAFSPDGRLLASGSLDN----TIRL 524

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D    +  + +    S + +  FS +G+    S  +D  + ++  D+ S    R L   
Sbjct: 525 WDAASGQLVRTLEGHTSDVNSVAFSPDGRLLA-SGARDSTVRLW--DVASGQLLRTLEGH 581

Query: 301 LFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                S ++SPD   +       G     + +  +      R  +          +SP G
Sbjct: 582 TDWVNSVAFSPDGRLLA-----SGSPDKTVRLWDAASGQLVRTLEGHTGRVLSVAFSPDG 636

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
            L+A     G  + + +      Q    +E   + + +  +SP GR L 
Sbjct: 637 RLLA---SGGRDWTVRLWDVQTGQLVRTLEGHTNLVSSVVFSPDGRLLA 682



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/266 (17%), Positives = 91/266 (34%), Gaps = 19/266 (7%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGAN 202
             SP    ++    S  + +++ G  GD    + F  +     SG    ++ + D     
Sbjct: 175 SGSPDKTVRLWDAASGRLVRTLKG-HGDSVFSVAFAPDGRLLASGSPDKTVRLWDVASGQ 233

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +          +F   F+P+ + +A  + D      V L D    +  + +      +L+
Sbjct: 234 LVRTLEGHTDWVFSVAFAPDGRLLASGSLDK----TVRLWDAASGQLVRALEGHTDSVLS 289

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
             F+ +G+    S   D+ + ++  D  S    R L        S +++PD   +   S 
Sbjct: 290 VAFAPDGRLLA-SGSPDKTVRLW--DAASGQLVRTLEGHTNWVRSVAFAPDGRLLASGSS 346

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               + + +  +      R  +   +      +SP G L+A     G    I +      
Sbjct: 347 ---DKTVRLWDAASGQLVRTLEGHTSDVNSVAFSPDGRLLASASADGT---IRLRDAASG 400

Query: 382 QERLLVEDSNLQAP--TWSPSGRSLI 405
           Q    +E         + SP GR L 
Sbjct: 401 QRVSALEGHTDIVAGLSISPDGRLLA 426



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 49/323 (15%), Positives = 99/323 (30%), Gaps = 45/323 (13%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSS-------PASWRKIAHTISDD 161
            V      RL          RLWD    + +   +  ++           R +A   SD 
Sbjct: 289 SVAFAPDGRLLASGSPDKTVRLWDAASGQLVRTLEGHTNWVRSVAFAPDGRLLASGSSDK 348

Query: 162 IYQSITGEKGDFN----------SRILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPS 209
             +      G             + + F  +  +         +  RD A+ + +     
Sbjct: 349 TVRLWDAASGQLVRTLEGHTSDVNSVAFSPDGRLLASASADGTIRLRDAASGQRVSALEG 408

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              I+     SP+ + +A A +D      + L +    R  + +      + +  F+ +G
Sbjct: 409 HTDIVAGLSISPDGRLLASAAWDS----VISLQEAATGRRVRALEGHTDAVFSVAFAPDG 464

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREG 324
           +    S  +D  + ++  D  S    R      ++      S ++SPD   +   S    
Sbjct: 465 RLLA-SGARDSTVRLW--DAASGQLLRTLKGHGSSHGSSVWSVAFSPDGRLLASGSL--- 518

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +  +      R  +   +      +SP G L+A          + +      Q  
Sbjct: 519 DNTIRLWDAASGQLVRTLEGHTSDVNSVAFSPDGRLLASGARDST---VRLWDVASGQLL 575

Query: 385 LLVEDSNLQ--APTWSPSGRSLI 405
             +E       +  +SP GR L 
Sbjct: 576 RTLEGHTDWVNSVAFSPDGRLLA 598



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 96/276 (34%), Gaps = 21/276 (7%)

Query: 101 QDWNS-LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS 159
             W+S +  Q   TGR ++  +      F +    D + +       +  S  ++    S
Sbjct: 428 AAWDSVISLQEAATGRRVRALEGHTDAVFSVAFAPDGRLLAS----GARDSTVRLWDAAS 483

Query: 160 DDIYQSITGEKGDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
             + +++ G      S +  V+ S       SG + N++ + D     +          +
Sbjct: 484 GQLLRTLKGHGSSHGSSVWSVAFSPDGRLLASGSLDNTIRLWDAASGQLVRTLEGHTSDV 543

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               FSP+ + +A    D      V L D    +  + +      + +  FS +G+    
Sbjct: 544 NSVAFSPDGRLLASGARDS----TVRLWDVASGQLLRTLEGHTDWVNSVAFSPDGRLLA- 598

Query: 275 SVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           S   D+ + ++  D  S    R L       +S ++SPD   +     R+   +L+    
Sbjct: 599 SGSPDKTVRLW--DAASGQLVRTLEGHTGRVLSVAFSPDGRLLA-SGGRDWTVRLW--DV 653

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                 R  +         V+SP G L+A     G 
Sbjct: 654 QTGQLVRTLEGHTNLVSSVVFSPDGRLLASGSDDGT 689



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 59/188 (31%), Gaps = 24/188 (12%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSP-------ASWRKIAHTISDDIYQSITGEKG- 171
               L    RLWD    + +   +  +S           R +A    D   +      G 
Sbjct: 514 ASGSLDNTIRLWDAASGQLVRTLEGHTSDVNSVAFSPDGRLLASGARDSTVRLWDVASGQ 573

Query: 172 ---------DFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
                    D+ + + F  +     SG    ++ + D     +          +    FS
Sbjct: 574 LLRTLEGHTDWVNSVAFSPDGRLLASGSPDKTVRLWDAASGQLVRTLEGHTGRVLSVAFS 633

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + +A           V L D +  +  + +    +++ +  FS +G+    S   D 
Sbjct: 634 PDGRLLA----SGGRDWTVRLWDVQTGQLVRTLEGHTNLVSSVVFSPDGRLLA-SGSDDG 688

Query: 281 AMDIYSVD 288
            + ++ V 
Sbjct: 689 TIRLWGVP 696


>gi|281410827|gb|ADA68826.1| NWD1 [Podospora anserina]
          Length = 294

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 82/242 (33%), Gaps = 19/242 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG    ++ + D               ++    FS + Q++A  + D      V +
Sbjct: 18  QRLASGSGDETVKIWDAATGACVQTLEGHGGLVMSVVFSADGQRLASGSRDK----TVKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
            D       + +     ++ +  FS++G+R   S   D  + I+  D  + A  + L   
Sbjct: 74  WDAATGACVRTLEGHGGLVSSVVFSADGQRLA-SGSDDRTVKIW--DAATGACVQTLEGH 130

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             + +S  +S D  ++   S   G + + +  +      +  +         V+S  G  
Sbjct: 131 GGLVMSVVFSADGQRLASGS---GDKTVKIWDAATGACVQTLEGHGGWVRSVVFSADGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A          + +           +E     + +  +S  G+ L       GD   K+
Sbjct: 188 LASGSHDKT---VKIWDAATGACVQTLEGHGGWVSSVVFSADGQRLA---SGSGDETVKI 241

Query: 419 YS 420
           + 
Sbjct: 242 WD 243



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 64/190 (33%), Gaps = 15/190 (7%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSP 311
           +      + +  FS++G+R   S   DE + I+  D  + A  + L     + +S  +S 
Sbjct: 1   LEGHGGSVRSVVFSADGQRLA-SGSGDETVKIW--DAATGACVQTLEGHGGLVMSVVFSA 57

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D  ++   S R+   +++   +      R  +         V+S  G  +A +       
Sbjct: 58  DGQRLASGS-RDKTVKIW--DAATGACVRTLEGHGGLVSSVVFSADGQRLA-SGSDDRTV 113

Query: 372 AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            I             +E     + +  +S  G+ L       GD   K++        +T
Sbjct: 114 KIW--DAATGACVQTLEGHGGLVMSVVFSADGQRLA---SGSGDKTVKIWDAATGACVQT 168

Query: 430 LINTPAYASD 439
           L     +   
Sbjct: 169 LEGHGGWVRS 178



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 48/126 (38%), Gaps = 9/126 (7%)

Query: 170 KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G +   ++F +  + + SG    ++ + D                +    FS + Q++A
Sbjct: 172 HGGWVRSVVFSADGQRLASGSHDKTVKIWDAATGACVQTLEGHGGWVSSVVFSADGQRLA 231

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D+     V + D       + +     ++ +  FS++G+R   S   DE + I+  
Sbjct: 232 SGSGDE----TVKIWDAATGACVQTLEGHGGLVRSVVFSADGQRLA-SGSGDETVKIW-- 284

Query: 288 DLQSNA 293
           D  +  
Sbjct: 285 DAATGE 290


>gi|300863567|ref|ZP_07108513.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300338434|emb|CBN53655.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 612

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 94/242 (38%), Gaps = 16/242 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +S+VSG    ++ + D       Y        ++   FS + Q +  ++ D      + L
Sbjct: 381 QSLVSGSRDKTIQMWDLKKGKWWYSLVGHSDRVYTVAFSADGQSLVSSSRDK----TIRL 436

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            + +  +  + I      + A  FS N  + L S  +D+ + ++ +     +   L+   
Sbjct: 437 WNLQKGKCTQTITGHSEGVFAVAFSPN-SQLLASGSRDKTVQLWDI-ATGRSICTLSGHT 494

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDL 360
              I+ ++SPD   +   S R+G  +L+ +  +G  +      D   S F   +S  G +
Sbjct: 495 NWIIAVAFSPDGKILASGS-RDGTIKLWRVNGDGKGELLHAIADNSESVFSVAFSGDGKI 553

Query: 361 IAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A +   G    I +   D     E L     ++ +  +S  G+SL        D   K+
Sbjct: 554 LASSGREG---QISLWDVDTGVLLEILSGHSGDVLSLAFSGDGKSLA---SGGSDRSIKI 607

Query: 419 YS 420
           + 
Sbjct: 608 WR 609



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 91/246 (36%), Gaps = 18/246 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG   N++ +   D  N  Y        +    F+PN Q +   + D      + +
Sbjct: 339 QTLASGSGDNTIEIWKLDTGNRWYTLRGHSDWVNCVAFNPNGQSLVSGSRDK----TIQM 394

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D +  +    +      +    FS++G+  + S  +D+ + ++  +LQ     +     
Sbjct: 395 WDLKKGKWWYSLVGHSDRVYTVAFSADGQSLV-SSSRDKTIRLW--NLQKGKCTQTITGH 451

Query: 302 FINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              + A ++SP+S  +   S R+   QL+                        +SP G +
Sbjct: 452 SEGVFAVAFSPNSQLLASGS-RDKTVQLW--DIATGRSICTLSGHTNWIIAVAFSPDGKI 508

Query: 361 IAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           +A     G    +  +  DG  E    +     ++ +  +S  G+ L  S  ++G     
Sbjct: 509 LASGSRDGT-IKLWRVNGDGKGELLHAIADNSESVFSVAFSGDGKILA-SSGREGQ--IS 564

Query: 418 LYSIDL 423
           L+ +D 
Sbjct: 565 LWDVDT 570



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 75/218 (34%), Gaps = 21/218 (9%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           SD +Y       G          +S+VS     ++ + +              + +F   
Sbjct: 410 SDRVYTVAFSADG----------QSLVSSSRDKTIRLWNLQKGKCTQTITGHSEGVFAVA 459

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSPN Q +A  + D      V L D    R+   +    + I+A  FS +GK  L S  +
Sbjct: 460 FSPNSQLLASGSRDK----TVQLWDIATGRSICTLSGHTNWIIAVAFSPDGK-ILASGSR 514

Query: 279 DEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D  + ++ V+          + +      S ++S D   +   S REG  Q+ +   +  
Sbjct: 515 DGTIKLWRVNGDGKGELLHAIADNSESVFSVAFSGDGKILA-SSGREG--QISLWDVDTG 571

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
               I            +S  G  +A +  S     I 
Sbjct: 572 VLLEILSGHSGDVLSLAFSGDGKSLA-SGGSDRSIKIW 608



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 83/228 (36%), Gaps = 13/228 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I Y        +    FSP+ Q +A  + D+     + +           +      +  
Sbjct: 318 IIYTMTGHLDSVTSVAFSPDNQTLASGSGDN----TIEIWKLDTGNRWYTLRGHSDWVNC 373

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             F+ NG+  + S  +D+ + ++ +  +      L        + ++S D   +V  S R
Sbjct: 374 VAFNPNGQSLV-SGSRDKTIQMWDL-KKGKWWYSLVGHSDRVYTVAFSADGQSLV-SSSR 430

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +  + + +         +         F   +SP   L+A +    +   +  +    S 
Sbjct: 431 D--KTIRLWNLQKGKCTQTITGHSEGVFAVAFSPNSQLLA-SGSRDKTVQLWDIATGRSI 487

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             L    + + A  +SP G+ L  S  +DG    KL+ ++ +G+ E L
Sbjct: 488 CTLSGHTNWIIAVAFSPDGKILA-SGSRDGT--IKLWRVNGDGKGELL 532


>gi|94971416|ref|YP_593464.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553466|gb|ABF43390.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 938

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 67/206 (32%), Gaps = 17/206 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R   +  +   G     +  ++ DG+N   LT         P  SP+ + V +     +
Sbjct: 722 DRYFVLQWAFHGGGYSYPVWRVNLDGSNPLRLTDGS--YDGRPNCSPDGKTVYFEPTTSK 779

Query: 235 DILRVYLMDTR--IDRAPKRIGNFRSMILAPRFSSNGKRALI------SVQKDEAMDIYS 286
             +    +D           +     + +    S +GK            Q      I  
Sbjct: 780 ATVARVPIDGGKQETVPGSEVERGFGIGVGHAVSPDGKLLAFNAEISTDAQGHVGEKIVF 839

Query: 287 VDLQS-NATERLTNTLFINISA------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           V L    A +R+ N      S       +++PD   + +     G E +++   +G+   
Sbjct: 840 VTLDGSGAAQRIINADPRISSGRLANTLTFTPDGKSVAYVVREHGVENVFIQPIDGTPGH 899

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTK 365
           +++        +  WSP G  +A  +
Sbjct: 900 QLTNFTSQLISNFHWSPDGKTLAIAR 925



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 92/297 (30%), Gaps = 28/297 (9%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GIIKNS 192
            D K I   +   +   W   A   +D +        G  N+     +           +
Sbjct: 635 GDGKTIAAVQQRVTRTFW--TAAMSNDALAAPPQSVAGVENAHTFAFNPDGSLLVSDDQT 692

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L   D  GA    +    +  + E     ++  V    +                  P R
Sbjct: 693 LRRTDLAGAATTTVLGDGNAYIVELAPCGDRYFVLQWAFHGGGYSYPVWRVNLDGSNPLR 752

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-----NTLFINISA 307
           + +  S    P  S +GK         +A  +  V +     E +          I +  
Sbjct: 753 LTDG-SYDGRPNCSPDGKTVYFEPTTSKAT-VARVPIDGGKQETVPGSEVERGFGIGVGH 810

Query: 308 SYSPDSSQIVFES----DREG--KEQLYVMQSNGSDQ--------KRISQDKEASYFDPV 353
           + SPD   + F +    D +G   E++  +  +GS           RIS  + A+     
Sbjct: 811 AVSPDGKLLAFNAEISTDAQGHVGEKIVFVTLDGSGAAQRIINADPRISSGRLANTL--T 868

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSR 408
           ++P G  +A+         + +   DG+    L       +    WSP G++L  +R
Sbjct: 869 FTPDGKSVAYVVREHGVENVFIQPIDGTPGHQLTNFTSQLISNFHWSPDGKTLAIAR 925



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 11/157 (7%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +LTNT     SA  SPD   +V   D  G   L++         ++       Y    +S
Sbjct: 389 QLTNTGKARQSA-ISPDGKYVVSVQDDNGVRSLWLRNVPTGSDTQVLPPSPVIYATLTFS 447

Query: 356 PQGDLIAF---TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           P G+ I +   +  +  ++ I  +   G   ++L +D +    T+SP G  + + R  D 
Sbjct: 448 PDGNYIYYRKASSAAQSEWDIFRIPVLGGSPQVLAKDVDSNV-TFSPDGTKMAYFRGNDP 506

Query: 413 DTGSKLY--SIDLNGRNETLINTPAYASDP---QWVG 444
           + G KLY    +L+G NE  +   +    P    W  
Sbjct: 507 EVG-KLYFLIANLDGSNEETVYIGSAVDLPRSIAWSA 542



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 77/185 (41%), Gaps = 13/185 (7%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQI 316
                   S +GK  +     +    ++  ++ + +  + L  +  I  + ++SPD + I
Sbjct: 394 GKARQSAISPDGKYVVSVQDDNGVRSLWLRNVPTGSDTQVLPPSPVIYATLTFSPDGNYI 453

Query: 317 VF---ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---EK 370
            +    S  + +  ++ +   G   + +++D +++     +SP G  +A+ + +     K
Sbjct: 454 YYRKASSAAQSEWDIFRIPVLGGSPQVLAKDVDSNVT---FSPDGTKMAYFRGNDPEVGK 510

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               +   DGS E  +   S +  P    WS  G+ L ++        S++  I++  + 
Sbjct: 511 LYFLIANLDGSNEETVYIGSAVDLPRSIAWSADGKRLFYNIFTLKTALSEIRQIEIASKK 570

Query: 428 ETLIN 432
            +L++
Sbjct: 571 ASLLS 575



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 83/250 (33%), Gaps = 34/250 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P+   +                D         +G+          +  G R    +Q
Sbjct: 678 AFNPDGSLLVSDDQTLRRT------DLAGAATTTVLGD--GNAYIVELAPCGDR-YFVLQ 728

Query: 278 -----KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                   +  ++ V+L  +   RLT+    +   + SPD   + FE     K  +  + 
Sbjct: 729 WAFHGGGYSYPVWRVNLDGSNPLRLTDG-SYDGRPNCSPDGKTVYFE-PTTSKATVARVP 786

Query: 333 SNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTK--------FSGEKFAIGVMKKDG 380
            +G  Q+ +     +           SP G L+AF            GEK     +   G
Sbjct: 787 IDGGKQETVPGSEVERGFGIGVGHAVSPDGKLLAFNAEISTDAQGHVGEKIVFVTLDGSG 846

Query: 381 SQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           + +R++  D  + +       T++P G+S+ +  ++ G     +  ID    ++    T 
Sbjct: 847 AAQRIINADPRISSGRLANTLTFTPDGKSVAYVVREHGVENVFIQPIDGTPGHQLTNFTS 906

Query: 435 AYASDPQWVG 444
              S+  W  
Sbjct: 907 QLISNFHWSP 916



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 67/193 (34%), Gaps = 18/193 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N      +      +   SP+ + V  +  DD  +  ++L +       + +     + 
Sbjct: 383 QNFTVAQLTNTGKARQSAISPDGKYVV-SVQDDNGVRSLWLRNVPTGSDTQVLPPSPVIY 441

Query: 261 LAPRFSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               FS +G        S       DI+ + +   + + L     ++ + ++SPD +++ 
Sbjct: 442 ATLTFSPDGNYIYYRKASSAAQSEWDIFRIPVLGGSPQVL--AKDVDSNVTFSPDGTKMA 499

Query: 318 FESDRE---GKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAI 373
           +    +   GK    +   +GS+++ +             WS  G  + +         I
Sbjct: 500 YFRGNDPEVGKLYFLIANLDGSNEETVYIGSAVDLPRSIAWSADGKRLFY--------NI 551

Query: 374 GVMKKDGSQERLL 386
             +K   S+ R +
Sbjct: 552 FTLKTALSEIRQI 564



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 78/242 (32%), Gaps = 15/242 (6%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY--ATYDDEDILR 238
             SV       SL + +    +   + P    I     FSP+   + Y  A+   +    
Sbjct: 408 VVSVQDDNGVRSLWLRNVPTGSDTQVLPPSPVIYATLTFSPDGNYIYYRKASSAAQSEWD 467

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATE 295
           ++ +            +  S +    FS +G +       D     +     +L  +  E
Sbjct: 468 IFRIPVLGGSPQVLAKDVDSNV---TFSPDGTKMAYFRGNDPEVGKLYFLIANLDGSNEE 524

Query: 296 RLTNTLFIN--ISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            +     ++   S ++S D  ++ +   + +    ++  ++        +S        +
Sbjct: 525 TVYIGSAVDLPRSIAWSADGKRLFYNIFTLKTALSEIRQIEIASKKASLLSAQTSTLVQE 584

Query: 352 PVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
               P    +         +    IGV+   G    +  + ++ +  + S  G+++   +
Sbjct: 585 LERLPGSSSLLIRGLDKSNYTKSQIGVLSDSGQVVPITRDTNSYEGMSLSGDGKTIAAVQ 644

Query: 409 KK 410
           ++
Sbjct: 645 QR 646



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 98/311 (31%), Gaps = 61/311 (19%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDD 233
           +++ +   +         L + + DG+N   +       +     +S + +++ Y  +  
Sbjct: 496 TKMAYFRGNDPEVGKLYFL-IANLDGSNEETVYIGSAVDLPRSIAWSADGKRLFYNIFTL 554

Query: 234 EDILRVYLM---------------DTRIDRAPKRIGNFRSMILAPRFS----------SN 268
           +  L                     T +    +  G+   +I     S          S+
Sbjct: 555 KTALSEIRQIEIASKKASLLSAQTSTLVQELERLPGSSSLLIRGLDKSNYTKSQIGVLSD 614

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT----ERLTNT-----LFINISAS----------- 308
             + +   +   + +  S+           +R+T T     +  +  A+           
Sbjct: 615 SGQVVPITRDTNSYEGMSLSGDGKTIAAVQQRVTRTFWTAAMSNDALAAPPQSVAGVENA 674

Query: 309 ----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               ++PD S +V  SD    + L      G+    +  D  A   +         +   
Sbjct: 675 HTFAFNPDGSLLV--SD---DQTLRRTDLAGAATTTVLGDGNAYIVELAPCGDRYFVLQW 729

Query: 365 KFSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            F G  ++  +  +  DGS    L + S    P  SP G+++ F   +   + + +  + 
Sbjct: 730 AFHGGGYSYPVWRVNLDGSNPLRLTDGSYDGRPNCSPDGKTVYF---EPTTSKATVARVP 786

Query: 423 LNGRNETLINT 433
           ++G  +  +  
Sbjct: 787 IDGGKQETVPG 797


>gi|295838967|ref|ZP_06825900.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|197695523|gb|EDY42456.1| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 1073

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 65/198 (32%), Gaps = 34/198 (17%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+    + + D    ++   L      R++           SPD + + + S REG  ++
Sbjct: 14  GELIAFTAEDD----VWIAPLDGGRAWRVSADNVPVQRPRISPDGATVAWTSHREGAPEV 69

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGS---- 381
           +V    G   +R++    A      W+P G+++A T              +  DGS    
Sbjct: 70  FVAPVEGGPSRRLTYWGSAKTAVRSWTPAGEVVAITSHGQASMRRTWAHALPLDGSASRR 129

Query: 382 --------------QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                          ER+L+     + P W        + R + G  G      D  G  
Sbjct: 130 LPYGPIGDLAHEPEGERVLLGTVPSREPAW--------WKRYRGGTAGKLWIGPDAEGAW 181

Query: 428 ETL-INTPAYASDPQWVG 444
           + +  +       P W G
Sbjct: 182 QRVHADLDGNIESPLWAG 199



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 97/260 (37%), Gaps = 32/260 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +   DG    +   + +  +  PR SP+   VA+ ++  E    V++         +
Sbjct: 24  DVWIAPLDGGRA-WRVSADNVPVQRPRISPDGATVAWTSHR-EGAPEVFVAPVE-GGPSR 80

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTNTLFINISA 307
           R+  + S   A R ++  G+   I+            +++ L  +A+ RL      +++ 
Sbjct: 81  RLTYWGSAKTAVRSWTPAGEVVAITSHGQASMRRTWAHALPLDGSASRRLPYGPIGDLAH 140

Query: 308 SYSPDSSQI-----------VFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
              P+  ++            ++  R G   +L++        +R+  D + +   P+W+
Sbjct: 141 E--PEGERVLLGTVPSREPAWWKRYRGGTAGKLWIGPDAEGAWQRVHADLDGNIESPLWA 198

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  IAF        A+     DGS  R    V+     A   +  G  +++S      
Sbjct: 199 --GGRIAFLSDHEGVGALYSSLPDGSDLRRHSPVDPDAFYARQAATDGTRVVWSS----- 251

Query: 414 TGSKLYSI-DLNGRNETLIN 432
              +L+ + DL G     ++
Sbjct: 252 -AGRLWILDDLEGAEPRPLD 270



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 81/226 (35%), Gaps = 31/226 (13%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A+   DD     V++      RA +   +   +   PR S +G     +  ++ A 
Sbjct: 14  GELIAFTAEDD-----VWIAPLDGGRAWRVSADNVPVQR-PRISPDGATVAWTSHREGAP 67

Query: 283 DIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQ 338
           +++   ++   + RLT       +  S++P    +   S  +   +    + +  +GS  
Sbjct: 68  EVFVAPVEGGPSRRLTYWGSAKTAVRSWTPAGEVVAITSHGQASMRRTWAHALPLDGSAS 127

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---------- 388
           +R+              P+G+ +        + A     + G+  +L +           
Sbjct: 128 RRLPYGPIGDLAHE---PEGERVLLGTVPSREPAWWKRYRGGTAGKLWIGPDAEGAWQRV 184

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
               D N+++P W+  G  + F    +G     LYS   +G +   
Sbjct: 185 HADLDGNIESPLWA--GGRIAFLSDHEG--VGALYSSLPDGSDLRR 226



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 72/215 (33%), Gaps = 18/215 (8%)

Query: 240 YLMDTRIDRAPKRIGNFRSM-ILAPR-FSSNGK-RALISVQKDEAMDIYSVDLQS----N 292
               T  D   + +   + +    PR F  +G+         +    I            
Sbjct: 311 VHWVTHRDGPARVLAGEQGVRARLPRTFRLDGEEWVAWVTDAEGEDAIEFAPATGAAPGT 370

Query: 293 ATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           A  R+        +S + +PD  ++   S      ++ +++ +  + + + + ++    +
Sbjct: 371 APRRIAAGRLGRVLSFAVAPDGERLGVASH---DGRVLLVERSSGEVREVDRTEDGDARE 427

Query: 352 PVWSPQGDLIAFTKFSGE---KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            V+SP    +A++    +   +  +  +  D +            +P ++P G+ L F  
Sbjct: 428 LVFSPDSTWLAWSHPGPDPLRQLKLAHVS-DLAPVEATPLRFKDYSPAFTPDGKHLAFLS 486

Query: 409 KKDGDTGSKLYSIDL---NGRNETLINTPAYASDP 440
            +  D     ++ DL         LI   A    P
Sbjct: 487 DRAFDPLYDAHNFDLAFIGTTRPHLITLAATTPSP 521



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 5/124 (4%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   R +   R   +     +P+ +++  A++D     RV L++       +        
Sbjct: 369 GTAPRRIAAGRLGRVLSFAVAPDGERLGVASHDG----RVLLVERSSGEVREVDRTEDGD 424

Query: 260 ILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                FS +      S    D    +    +   A    T   F + S +++PD   + F
Sbjct: 425 ARELVFSPDSTWLAWSHPGPDPLRQLKLAHVSDLAPVEATPLRFKDYSPAFTPDGKHLAF 484

Query: 319 ESDR 322
            SDR
Sbjct: 485 LSDR 488


>gi|258649216|ref|ZP_05736685.1| prolyl oligopeptidase family protein [Prevotella tannerae ATCC
           51259]
 gi|260850481|gb|EEX70350.1| prolyl oligopeptidase family protein [Prevotella tannerae ATCC
           51259]
          Length = 714

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 56/330 (16%), Positives = 108/330 (32%), Gaps = 85/330 (25%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----------------- 227
            +    + L +M+ DG+N + ++  +  +      SP+ +K+                  
Sbjct: 112 SNASGSSQLWMMNADGSNRQQISHEKTDVNDF-LVSPDNKKIIMIMDVPQHHSIQENDKD 170

Query: 228 -------------YATYDD-----EDILRVYLMDTRIDRAPKRIGNFR--------SMIL 261
                        Y  +D             L    I      +                
Sbjct: 171 LPKASGMVINDLMYKHWDHYVTTAPHPYVADLNALGITNPIDLLAGEPYECPMEPFGGAE 230

Query: 262 APRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERL-------------TNT 300
              +S + K+ + + +K            DIY  DL S  T  L             T +
Sbjct: 231 QLAWSPDSKQIVYTSRKKVGLKYAISTDSDIYLYDLTSRKTVNLCKPSDYKEPESTPTQS 290

Query: 301 L--------------FINISASYSPDSSQIVFESD-REG----KEQLYVMQSNGSDQKRI 341
           L                + +  +SPD   + + S  R+G    + +L V + +   ++ +
Sbjct: 291 LQAQAVNHQQSDFNVGYDQNPQFSPDGRYVAWLSMARDGYESDRSRLCVYELSTGKKQYV 350

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           ++  E+S  D +WS     I FT        I      GS ++L+ + ++    + SPS 
Sbjct: 351 TESFESSVNDFLWSSNSKDIYFTGVWHGVANIYATNLKGSVKKLINDIADYSLVSLSPSN 410

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           + LI ++K       +LY +  NG+   L 
Sbjct: 411 KGLI-AKKHSMSQADELYEVGFNGKVSQLT 439



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 89/250 (35%), Gaps = 60/250 (24%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFI 303
           P+ + +F   I +   S N  +A+ +V      Q      +Y++ L + A++ LT + + 
Sbjct: 37  PEVLWSF-GRIGSVNVSPNDNKAVYTVSYFSKEQNKSHSVLYAMALSNKASKLLTASSYN 95

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                +      I+F S+  G  QL++M ++GS++++IS +K     D + SP    I  
Sbjct: 96  ERGGVFVNQGKSIIFLSNASGSSQLWMMNADGSNRQQISHEK-TDVNDFLVSPDNKKIIM 154

Query: 364 TKFSGEKFAI---------------------------------GVMKKDGSQERL---LV 387
                +  +I                                  V   +         L+
Sbjct: 155 IMDVPQHHSIQENDKDLPKASGMVINDLMYKHWDHYVTTAPHPYVADLNALGITNPIDLL 214

Query: 388 EDSNLQAP----------TWSPSGRSLIFSRKKDGD------TGSKLYSIDLNGRNETLI 431
                + P           WSP  + ++++ +K         T S +Y  DL  R    +
Sbjct: 215 AGEPYECPMEPFGGAEQLAWSPDSKQIVYTSRKKVGLKYAISTDSDIYLYDLTSRKTVNL 274

Query: 432 NTPAYASDPQ 441
             P+   +P+
Sbjct: 275 CKPSDYKEPE 284



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 63/151 (41%), Gaps = 7/151 (4%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATY----DDEDILRVYLMDTRIDRAPKRIGNFRSM 259
              +         P+FSP+ + VA+ +      + D  R+ + +    +      +F S 
Sbjct: 298 HQQSDFNVGYDQNPQFSPDGRYVAWLSMARDGYESDRSRLCVYELSTGKKQYVTESFESS 357

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +    +SSN K    +       +IY+ +L+  + ++L N +      S SP +  ++ +
Sbjct: 358 VNDFLWSSNSKDIYFTGVWHGVANIYATNLK-GSVKKLINDIADYSLVSLSPSNKGLIAK 416

Query: 320 S-DREGKEQLYVMQSNGSDQKRISQDKEASY 349
                  ++LY +  NG    +++ + +A Y
Sbjct: 417 KHSMSQADELYEVGFNG-KVSQLTFENKAFY 446


>gi|126173470|ref|YP_001049619.1| peptidase S41 [Shewanella baltica OS155]
 gi|125996675|gb|ABN60750.1| peptidase S41 [Shewanella baltica OS155]
          Length = 1094

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 113/297 (38%), Gaps = 36/297 (12%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---- 228
           +  R+ F+S+S  +      L  M  DG++ + LT  +D  +   +   +Q KV +    
Sbjct: 226 WQDRLYFISDSDGNDN----LWSMALDGSDAKQLTQFKDWQVRGAQM--DQGKVVFQQGA 279

Query: 229 --ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN----GKRALISVQKDEAM 282
               +D        L         +R  ++    +    S++    G + +I+ +     
Sbjct: 280 DIHVFDIAAAKDALLNIELTSDFAQRREHWVKDPMDYASSTDLALAGDKVVITAR----S 335

Query: 283 DIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKR 340
            +    +  +   ++     +    A  S D   +   SD  G+++++   ++G S  K+
Sbjct: 336 HVAIAGVDGSRLIQVALPGTYRVREAILSQDGKSVYAISDMTGQQEIWQFPADGSSGAKQ 395

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
           +++D          S  G  IA     G    + ++    +  + ++ +     P     
Sbjct: 396 LTKDGHTLRMSLNLSNDGRFIAHDDNDG---NVWLLDLKKNTNQKIITNGEGLGPYADIR 452

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLIN------TPAYASDPQWVGFM 446
           WS   R +  ++ + G    ++    ++  + ETL +      +P ++SD  W+ F+
Sbjct: 453 WSGDSRFIALTKSEIGKQRPQIVLYSVDENKAETLTSDKYESYSPTFSSDGLWLYFL 509



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 115/289 (39%), Gaps = 27/289 (9%)

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-QIIGKKF 144
           S     ++   + +F+DW   GAQ+   G+V+ +       +  ++D+   K  ++  + 
Sbjct: 244 SMALDGSDAKQLTQFKDWQVRGAQMD-QGKVVFQQG----ADIHVFDIAAAKDALLNIEL 298

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            S  A  R+  H + D +  + + +      +++  + S V         +   DG+ + 
Sbjct: 299 TSDFAQRRE--HWVKDPMDYASSTDLALAGDKVVITARSHV--------AIAGVDGSRLI 348

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAP 263
            +       + E   S + + V YA  D      ++          K++  +  ++ ++ 
Sbjct: 349 QVALPGTYRVREAILSQDGKSV-YAISDMTGQQEIWQFPADGSSGAKQLTKDGHTLRMSL 407

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISA--SYSPDSSQIVFES 320
             S++G+        D   +++ +DL+ N  ++ +TN   +   A   +S DS  I    
Sbjct: 408 NLSNDGRFIA---HDDNDGNVWLLDLKKNTNQKIITNGEGLGPYADIRWSGDSRFIALTK 464

Query: 321 DREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
              GK   Q+ +   + +  + ++ DK  SY  P +S  G  + F    
Sbjct: 465 SEIGKQRPQIVLYSVDENKAETLTSDKYESY-SPTFSSDGLWLYFLSNR 512



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 58/154 (37%), Gaps = 10/154 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLT-NTLFINISASYSPDSSQIVFESDR 322
            S +GK            +I+      +   ++LT +   + +S + S D     F +  
Sbjct: 363 LSQDGKSVYAISDMTGQQEIWQFPADGSSGAKQLTKDGHTLRMSLNLSNDGR---FIAHD 419

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKK 378
           +    ++++    +  ++I  + E    Y D  WS     IA TK     ++  I +   
Sbjct: 420 DNDGNVWLLDLKKNTNQKIITNGEGLGPYADIRWSGDSRFIALTKSEIGKQRPQIVLYSV 479

Query: 379 DGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
           D ++   L  D     +PT+S  G  L F   + 
Sbjct: 480 DENKAETLTSDKYESYSPTFSSDGLWLYFLSNRQ 513



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 6/120 (5%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +  + + + D    +++  L   A  RLT+     + A+ S D   + + ++ EG  ++Y
Sbjct: 42  QTLVFTAEGD----LWTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVY 97

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V+   G   KR+S +  +      W+P+G+ I ++  SG   A   M +    + L   D
Sbjct: 98  VIPVAGGVAKRVSFE-NSRVRVQGWTPKGE-ILYSTDSGFGPANNWMLRSVDPKTLTTTD 155



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 70/208 (33%), Gaps = 20/208 (9%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              T   +A  R+ +  +  L    S++GK        + A ++Y + +     +R++  
Sbjct: 53  WTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVYVIPVAGGVAKRVSFE 112

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   ++P    +       G    ++++S        +    A   + V   + + 
Sbjct: 113 NSRVRVQGWTPKGEILYSTDSGFGPANNWMLRSVDPKTLTTTDLPLADAVEGVIDERNEY 172

Query: 361 IAFTKF-------------SGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSL 404
           + FT+F              G K  +   K     E  L+    D +++ P        L
Sbjct: 173 VYFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQD--RL 230

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            F    DG     L+S+ L+G +   + 
Sbjct: 231 YFISDSDG--NDNLWSMALDGSDAKQLT 256



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 68/213 (31%), Gaps = 25/213 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G        S          S + + VAY   + E    VY++        KR+    S 
Sbjct: 58  GQKAATRLTSLPAEELGATISADGKWVAYVA-NYEGASEVYVIPV-AGGVAKRVSFENSR 115

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQI 316
           +    ++  G   L S           + L+S   + LT T   L   +       +  +
Sbjct: 116 VRVQGWTPKG-EILYSTDSGFGPANNWM-LRSVDPKTLTTTDLPLADAVEGVIDERNEYV 173

Query: 317 VFES------------DREG-KEQLYVMQSNG-SDQKRISQDKEASYFDPV-WSPQGDLI 361
            F               R G K +L+  +    ++ + +S   + S   P+ W    D +
Sbjct: 174 YFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQ---DRL 230

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            F   S     +  M  DGS  + L +  + Q 
Sbjct: 231 YFISDSDGNDNLWSMALDGSDAKQLTQFKDWQV 263


>gi|86159869|ref|YP_466654.1| WD-40 repeat-containing serine/threonin protein kinase
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776380|gb|ABC83217.1| serine/threonine protein kinase with WD40 repeats [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 1076

 Score = 83.5 bits (205), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 61/374 (16%), Positives = 125/374 (33%), Gaps = 40/374 (10%)

Query: 77  DVFNLI--SQDSFKQKITNPDSIPRFQDWN------SLGA-QVLVT-----GRVIKE-GK 121
               +I     +       P  +P    W+      ++G+   LV      GR+ +  G 
Sbjct: 556 GFVRVIASPSGAVLATAPLPGGVPFSVAWSPDGRVIAVGSEDGLVRLLGPDGRIRQTLGA 615

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             + V    +D    + + G +   +   WR  A   +    +      G   +      
Sbjct: 616 PGMAVSSVEFDRAGTRVVAGSQ-DGAAHVWRLGA---AGPEIRLRGHRGGVAYAAFAPDG 671

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             V++G    ++ +   DG     +      I   P   P+  +V    +       + +
Sbjct: 672 RHVITGGTDGTVRIWRADGEGTPVVLRGHTVIDGAPT--PDGTRV----FTRGTDDVIRV 725

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             T   R   ++    +++    ++ +G R L +   D    ++   +   A   + +  
Sbjct: 726 WRTDDPRQRGQLVGHEALVDTVEWTRDGTRVL-TASHDGTARLW--PVHGGAALTVRDPG 782

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +  SA   P     V  S+      + V  +      R  +  E       +SP G LI
Sbjct: 783 NVIHSADLDPTERTFVTSSE---DRTVRVWDAATGALVRELRGHEGPVLSAAFSPDGTLI 839

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           A          + V + DG+   L+     + L A TW+P G+++I       +  + ++
Sbjct: 840 ASGSLDKT---VRVWRADGTGTPLVFRGHGAVLTAVTWTPDGKAVI--SSSQDEASAHVW 894

Query: 420 SIDLNGRNETLINT 433
              L+G    +I T
Sbjct: 895 --PLDGSPPRIIKT 906



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 102/312 (32%), Gaps = 30/312 (9%)

Query: 118  KEGKDRLRVEFRLWDVK----DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
               + +L     L D      D  +++      +   W    H  +    +         
Sbjct: 731  PRQRGQLVGHEALVDTVEWTRDGTRVLTASHDGTARLWP--VHGGAALTVR---DPGNVI 785

Query: 174  NSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            +S  L  +E   V+     ++ V D     +       +  +    FSP+   +A  + D
Sbjct: 786  HSADLDPTERTFVTSSEDRTVRVWDAATGALVRELRGHEGPVLSAAFSPDGTLIASGSLD 845

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                  V +        P       +++ A  ++ +GK  + S Q + +  ++ +D    
Sbjct: 846  K----TVRVWRADGTGTPLVFRGHGAVLTAVTWTPDGKAVISSSQDEASAHVWPLD---G 898

Query: 293  ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +  R+  T      A  +PD + +V     E    L +   +G ++       E   F  
Sbjct: 899  SPPRIIKTERPVFRAVVAPDGTLLV----PEQGGTLRLFGPDGEERAPFPALPEG-LFSA 953

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              S  G   A     G    + V  +DG+     L   +  +    +SP G  L      
Sbjct: 954  AVSRDGRRWALASSDGS---VRVYPRDGTGDPLVLRAHEGAVGHAAFSPDGTELA---TV 1007

Query: 411  DGDTGSKLYSID 422
              D  +++ ++D
Sbjct: 1008 SADGTARVSTVD 1019



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 78/260 (30%), Gaps = 12/260 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             +V+     +L V   DG       P+    L +    P   +VA A   D  +    +
Sbjct: 461 RRLVTADHAGALRVFALDGDAPPRTLPAGSVPLVKLALDPAG-RVAAAGALDGRLWLADV 519

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                   P+ +      +LA  FS +G R   +   D  + + +               
Sbjct: 520 TGAAGGTPPRAVL-HDGAVLALAFSPDGARVA-TGSVDGFVRVIASP-SGAVLATAPLPG 576

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +  S ++SPD   I   S+    + L  +       ++       +     +   G  +
Sbjct: 577 GVPFSVAWSPDGRVIAVGSE----DGLVRLLGPDGRIRQTLGAPGMAVSSVEFDRAGTRV 632

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 G    +  +   G + RL      +    ++P GR +I       D   +++  
Sbjct: 633 VAGSQDGAA-HVWRLGAAGPEIRLRGHRGGVAYAAFAPDGRHVI---TGGTDGTVRIWRA 688

Query: 422 DLNGRNETLINTPAYASDPQ 441
           D  G    L         P 
Sbjct: 689 DGEGTPVVLRGHTVIDGAPT 708



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 103/290 (35%), Gaps = 37/290 (12%)

Query: 104  NSLGAQVLV-TGRVIKEGKDRLRVE----FRLWDVKDRKQIIGK---------------K 143
              +G + LV T    ++G   L        RLW V     +  +               +
Sbjct: 736  QLVGHEALVDTVEWTRDGTRVLTASHDGTARLWPVHGGAALTVRDPGNVIHSADLDPTER 795

Query: 144  FFSSPASWR--KIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDG 200
             F + +  R  ++    +  + + + G +G   S       + + SG +  ++ V   DG
Sbjct: 796  TFVTSSEDRTVRVWDAATGALVRELRGHEGPVLSAAFSPDGTLIASGSLDKTVRVWRADG 855

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                 +      +L    ++P+ + V  ++ D+            +D +P RI      +
Sbjct: 856  TGTPLVFRGHGAVLTAVTWTPDGKAVISSSQDEASA-----HVWPLDGSPPRIIKTERPV 910

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
                 + +G   L+  ++   + ++  D +  A    L   LF   SA+ S D  +    
Sbjct: 911  FRAVVAPDGT--LLVPEQGGTLRLFGPDGEERAPFPALPEGLF---SAAVSRDGRRWALA 965

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            S  +G  ++Y    +G+    + +  E +     +SP G  +A     G 
Sbjct: 966  SS-DGSVRVY--PRDGTGDPLVLRAHEGAVGHAAFSPDGTELATVSADGT 1012



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 60/216 (27%), Gaps = 12/216 (5%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           +              +  P+ + +     L    S +G    +  ++  A  ++  D  +
Sbjct: 380 EPPPRAVAIAQRLLSEPIPETVLDGVPKGLGLAVSPDGAWVAVGGEQGGA-KLWRAD-GT 437

Query: 292 NATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            A   L           +++PD  ++V  +D  G   L V   +G    R          
Sbjct: 438 GAPRVLAADGAARTDGLAFTPDGRRLV-TADHAGA--LRVFALDGDAPPRTLPAGSVPLV 494

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                P G + A     G  +   V    G    R ++ D  + A  +SP G  +     
Sbjct: 495 KLALDPAGRVAAAGALDGRLWLADVTGAAGGTPPRAVLHDGAVLALAFSPDGARVA---- 550

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
                G        +G        P        W  
Sbjct: 551 TGSVDGFVRVIASPSGAVLATAPLPGGVPFSVAWSP 586



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 62/221 (28%), Gaps = 14/221 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+    A+     E                    +  +      F+ +G+R + +  
Sbjct: 412 AVSPDG---AWVAVGGEQGGAKLWRADGTGAPRVLAADGAARTDGLAFTPDGRRLV-TAD 467

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              A+ ++++D        L       +  +  P        +         V  + G  
Sbjct: 468 HAGALRVFALDGD-APPRTLPAGSVPLVKLALDPAGRVAAAGALDGRLWLADVTGAAGGT 526

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPT 396
             R +   + +     +SP G  +A     G    I      G+      +      +  
Sbjct: 527 PPR-AVLHDGAVLALAFSPDGARVATGSVDGFVRVIA--SPSGAVLATAPLPGGVPFSVA 583

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           WSP GR +       G     +  +  +GR    +  P  A
Sbjct: 584 WSPDGRVIAV-----GSEDGLVRLLGPDGRIRQTLGAPGMA 619


>gi|189501134|ref|YP_001960604.1| WD-40 repeat protein [Chlorobium phaeobacteroides BS1]
 gi|189496575|gb|ACE05123.1| WD-40 repeat protein [Chlorobium phaeobacteroides BS1]
          Length = 317

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 82/239 (34%), Gaps = 17/239 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG     + + D +   I +        +    +SP+  KVA  + D      V + D 
Sbjct: 51  VSGSFDEKVMLWDVETGTILHTMSGHSTWVKCVDYSPDGDKVASGSIDS----TVRIWDV 106

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              ++        + +    FS +GK    S  +D  + ++ V+      + LT      
Sbjct: 107 ETGKSLHECKGHDTEVRMVAFSPDGKTLA-SCSRDTTIKLWDVE-SGKELKTLTGHTSYI 164

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              ++S D  ++V   +      + +            + ++   +   +SP   LI   
Sbjct: 165 ECVAFSHDGKKLVSCGEE---PVVRIWDVASGKNTANYKTRDRHTYSVSFSPDSSLIILC 221

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              G    + ++       + ++E  +   ++  +SP G     +     D   +L+ +
Sbjct: 222 ---GRDAMVKILDAATGDIKHIMEGHHDGVRSVRFSPDGNK---AASVANDESVRLWDV 274



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 82/229 (35%), Gaps = 20/229 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG I +++ + D +     +     D  +    FSP+ + +A  + D      + L
Sbjct: 90  DKVASGSIDSTVRIWDVETGKSLHECKGHDTEVRMVAFSPDGKTLASCSRDT----TIKL 145

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +  K +    S I    FS +GK+ +      E   +   D+ S       N  
Sbjct: 146 WDVESGKELKTLTGHTSYIECVAFSHDGKKLV---SCGEEPVVRIWDVASGKNT--ANYK 200

Query: 302 FIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             +    S S+SPDSS I+          + ++ +   D K I +          +SP G
Sbjct: 201 TRDRHTYSVSFSPDSSLIILC---GRDAMVKILDAATGDIKHIMEGHHDGVRSVRFSPDG 257

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
           +  A          + +   +  +E        L+  +   SP G  ++
Sbjct: 258 NKAASVANDES---VRLWDVESGKEIHSYRGHVLEVQSVDISPDGTMIV 303



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 68/205 (33%), Gaps = 20/205 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                +  +   RFSP+ +K+   ++D++    V L D         +    + +    +
Sbjct: 30  TFEGHEDRVLGVRFSPDGKKLVSGSFDEK----VMLWDVETGTILHTMSGHSTWVKCVDY 85

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDR 322
           S +G +   S   D  + I+  D+++  +  L      +       +SPD   +   S  
Sbjct: 86  SPDGDKVA-SGSIDSTVRIW--DVETGKS--LHECKGHDTEVRMVAFSPDGKTLASCSR- 139

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                + +       + +      +      +S  G  +      GE+  + +      +
Sbjct: 140 --DTTIKLWDVESGKELKTLTGHTSYIECVAFSHDGKKLVSC---GEEPVVRIWDVASGK 194

Query: 383 --ERLLVEDSNLQAPTWSPSGRSLI 405
                   D +  + ++SP    +I
Sbjct: 195 NTANYKTRDRHTYSVSFSPDSSLII 219



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 79/262 (30%), Gaps = 37/262 (14%)

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
           K     +    R+WDV+  K +   +        R +A   S D                
Sbjct: 91  KVASGSIDSTVRIWDVETGKSL--HECKGHDTEVRMVA--FSPD---------------- 130

Query: 178 LFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               +++ S     ++ + D + G  ++ LT     I     FS + +K+        + 
Sbjct: 131 ---GKTLASCSRDTTIKLWDVESGKELKTLTGHTSYIECV-AFSHDGKKLVSC----GEE 182

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             V + D    +             +  FS +    ++  +      +  +D  +   + 
Sbjct: 183 PVVRIWDVASGKNTANYKTRDRHTYSVSFSPDSSLIILCGR---DAMVKILDAATGDIKH 239

Query: 297 LTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +       + S  +SPD ++    ++    E + +       +    +           S
Sbjct: 240 IMEGHHDGVRSVRFSPDGNKAASVAN---DESVRLWDVESGKEIHSYRGHVLEVQSVDIS 296

Query: 356 PQGDLIAFTKFSGEKFAIGVMK 377
           P G +I  +     K     MK
Sbjct: 297 PDGTMIV-SGSDDRKIKFWKMK 317


>gi|224023611|ref|ZP_03641977.1| hypothetical protein BACCOPRO_00318 [Bacteroides coprophilus DSM
           18228]
 gi|224016833|gb|EEF74845.1| hypothetical protein BACCOPRO_00318 [Bacteroides coprophilus DSM
           18228]
          Length = 489

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 55/279 (19%), Positives = 92/279 (32%), Gaps = 61/279 (21%)

Query: 194 CVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            + + DG   +      + Q L  P +  + + +A++    +                 R
Sbjct: 205 YLSEPDGVKRLEAKINGKVQSLVYPSWHSSGRFIAFSMNQTKQAFH--------QNDRNR 256

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I  F        FSS+    +  +++D  +              L          ++SPD
Sbjct: 257 IEVFD-------FSSD--VVVYDLERDAVLTDSL----------LMKQTAFETFPTFSPD 297

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD------------------PVW 354
             ++ F S  E K   Y           I  D E+  F                   P  
Sbjct: 298 GKKLYFCS-AEAKTLPYEFDQVKYSLCSIDFDAESRSFGTQVDTLYNGRLKNKSVSFPRV 356

Query: 355 SPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLL--VEDSNLQAP-TWSPSGRSL 404
           SP G  + FT  S   F+I        ++     Q   L  V  +++++  +WS +G  L
Sbjct: 357 SPDGRFLVFTLSSYGNFSIWHKDADLMMVDLKTGQVSELEGVNSNDVESYHSWSSNGHWL 416

Query: 405 IFSRKK-DG-DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +FS ++ DG  T   L  +D  G        P   SDPQ
Sbjct: 417 VFSSRRVDGLYTHPYLVHVDGEGHWSKPFAVP--QSDPQ 453



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 85/248 (34%), Gaps = 43/248 (17%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII--- 189
           V   +  +G  + S P   +++   I+  + QS+       + R +  S +         
Sbjct: 194 VFHMRAQLGGTYLSEPDGVKRLEAKINGKV-QSLVYPSWHSSGRFIAFSMNQTKQAFHQN 252

Query: 190 -KNSLCVMD-------RDGANIRYLTPS----RDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +N + V D        D      LT S    +      P FSP+ +K+ + + + + + 
Sbjct: 253 DRNRIEVFDFSSDVVVYDLERDAVLTDSLLMKQTAFETFPTFSPDGKKLYFCSAEAKTLP 312

Query: 238 RVYLM----------DTRIDRAPKRIGNFRS------MILAPRFSSNGKRALISVQKDEA 281
             +            D        ++    +       +  PR S +G+  + ++     
Sbjct: 313 YEFDQVKYSLCSIDFDAESRSFGTQVDTLYNGRLKNKSVSFPRVSPDGRFLVFTLSSYGN 372

Query: 282 MDIY-------SVDLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDR-EG-KEQLYV 330
             I+        VDL++     L      ++    S+S +   +VF S R +G     Y+
Sbjct: 373 FSIWHKDADLMMVDLKTGQVSELEGVNSNDVESYHSWSSNGHWLVFSSRRVDGLYTHPYL 432

Query: 331 MQSNGSDQ 338
           +  +G   
Sbjct: 433 VHVDGEGH 440



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 41/132 (31%), Gaps = 32/132 (24%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---QDKEASYFDPVWSP 356
             F N          ++VF   R      Y+ + +G   KR+      K  S   P W  
Sbjct: 183 HSFNNREP------DRMVFH-MRAQLGGTYLSEPDG--VKRLEAKINGKVQSLVYPSWHS 233

Query: 357 QGDLIAFTK-------FSGEKFAIGVMKKDGSQER-------LLVE------DSNLQAPT 396
            G  IAF+           ++  I V                +L +       +    PT
Sbjct: 234 SGRFIAFSMNQTKQAFHQNDRNRIEVFDFSSDVVVYDLERDAVLTDSLLMKQTAFETFPT 293

Query: 397 WSPSGRSLIFSR 408
           +SP G+ L F  
Sbjct: 294 FSPDGKKLYFCS 305


>gi|227113077|ref|ZP_03826733.1| hypothetical protein PcarbP_08950 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 370

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 54/147 (36%), Gaps = 18/147 (12%)

Query: 280 EAMDIYSVDLQSNATERLT-----NTLFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT         +      +   SPD S+I F   D  G  QL+
Sbjct: 218 GTTTSMPAPPAGVQQRRLTFTHSHRYPGLVNQPRHWLRASPDGSEIAFLMRDEAGVVQLW 277

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +  NG + +++++ +        W P G  +AF   +    +I + +    +   L   
Sbjct: 278 TLSPNGGEPRQVTRTEHGVQSAFNWHPDGRSLAFVSDN----SIMLCEAKSGELVRLTAR 333

Query: 390 SN----LQAPTWSPSGRSLIFSRKKDG 412
           ++      A  +SP G+ + + R+ DG
Sbjct: 334 TDSAPSADAVVFSPDGKHIAYMREIDG 360



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 53/129 (41%), Gaps = 12/129 (9%)

Query: 256 FRSMILAPR-F---SSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTL-FINISASY 309
           +  ++  PR +   S +G      ++ +   + ++++        ++T T   +  + ++
Sbjct: 243 YPGLVNQPRHWLRASPDGSEIAFLMRDEAGVVQLWTLSPNGGEPRQVTRTEHGVQSAFNW 302

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS 367
            PD   + F SD      + + ++   +  R++   D   S    V+SP G  IA+ +  
Sbjct: 303 HPDGRSLAFVSDNS----IMLCEAKSGELVRLTARTDSAPSADAVVFSPDGKHIAYMREI 358

Query: 368 GEKFAIGVM 376
                + V+
Sbjct: 359 DGFNQLFVV 367



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 11/126 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +Q     R SP+  ++A+   D+  +++++ +        +       +  A  +  +G+
Sbjct: 248 NQPRHWLRASPDGSEIAFLMRDEAGVVQLWTLSPNGGEPRQVTRTEHGVQSAFNWHPDGR 307

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-----YSPDSSQIVFESDREGK 325
                        I   + +S    RLT     + + S     +SPD   I +  + +G 
Sbjct: 308 SLAFVSDNS----IMLCEAKSGELVRLTART--DSAPSADAVVFSPDGKHIAYMREIDGF 361

Query: 326 EQLYVM 331
            QL+V+
Sbjct: 362 NQLFVV 367



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/98 (14%), Positives = 35/98 (35%), Gaps = 7/98 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +  +G   R +T +   +     + P+ + +A+ + +      + L + +     +
Sbjct: 275 QLWTLSPNGGEPRQVTRTEHGVQSAFNWHPDGRSLAFVSDN-----SIMLCEAKSGELVR 329

Query: 252 RI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                +      A  FS +GK      + D    ++ V
Sbjct: 330 LTARTDSAPSADAVVFSPDGKHIAYMREIDGFNQLFVV 367


>gi|29832117|ref|NP_826751.1| protease [Streptomyces avermitilis MA-4680]
 gi|29609235|dbj|BAC73286.1| putative protease [Streptomyces avermitilis MA-4680]
          Length = 1073

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 70/194 (36%), Gaps = 23/194 (11%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+    + + D    ++   L      R++           SPD + + + S R+G  ++
Sbjct: 17  GELVAFTAEDD----VWVAPLDGGRAWRVSADNVPVTHPRISPDGTTVAWTSTRDGAPEV 72

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL 385
           ++   +G   +R++    +      W+P G ++A +              +  DG     
Sbjct: 73  HIAPVDGGPARRLTHWGSSRTQVRGWTPAGQVLAISTVGQASLRRSWARAVPLDGGPATT 132

Query: 386 L----VEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSIDLN------GRNETL- 430
           L    V D +   P      +P GR   + ++  G T  KL+ ID +      G    L 
Sbjct: 133 LPYGPVGDVSYGGPGVLLLSAPMGREAAWWKRYRGGTAGKLW-IDRDAEGEEAGEFVRLH 191

Query: 431 INTPAYASDPQWVG 444
            +       P WVG
Sbjct: 192 ADLDGNIEYPSWVG 205



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 80/228 (35%), Gaps = 32/228 (14%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + VA+   DD     V++      RA  R+      +  PR S +G     +  +D A 
Sbjct: 17  GELVAFTAEDD-----VWVAPLDGGRAW-RVSADNVPVTHPRISPDGTTVAWTSTRDGAP 70

Query: 283 DIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFE-----SDREGKEQLYVMQSNGS 336
           +++   +      RLT+          ++P    +        S R    +   +  +G 
Sbjct: 71  EVHIAPVDGGPARRLTHWGSSRTQVRGWTPAGQVLAISTVGQASLRRSWAR--AVPLDGG 128

Query: 337 DQKRISQD--KEASYFDP----VWSPQGDLIA-FTKFSGEKFAIGVMKKD------GSQE 383
               +      + SY  P    + +P G   A + ++ G       + +D      G   
Sbjct: 129 PATTLPYGPVGDVSYGGPGVLLLSAPMGREAAWWKRYRGGTAGKLWIDRDAEGEEAGEFV 188

Query: 384 RLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           RL  + D N++ P+W   G  + F    +G     LYS   +G +   
Sbjct: 189 RLHADLDGNIEYPSWV--GERVAFLSDHEG--VGALYSSLADGSDLRR 232



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 74/211 (35%), Gaps = 24/211 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +   DG   R LT           ++P  Q +A +T     + R +     +D  P 
Sbjct: 71  EVHIAPVDGGPARRLTHWGSSRTQVRGWTPAGQVLAISTVGQASLRRSWARAVPLDGGPA 130

Query: 252 RIGNFRSMILAPRF---------SSNGKRALISVQ-KDEAMDIYSVDLQS-----NATER 296
                   +    +         +  G+ A    + +        +D  +         R
Sbjct: 131 T-TLPYGPVGDVSYGGPGVLLLSAPMGREAAWWKRYRGGTAGKLWIDRDAEGEEAGEFVR 189

Query: 297 LTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           L   L  NI   S+     ++ F SD EG   LY   ++GSD +R +      ++    +
Sbjct: 190 LHADLDGNIEYPSWV--GERVAFLSDHEGVGALYSSLADGSDLRRHTPID--GFYARHAA 245

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             G  + ++  +GE + +     DG++ R L
Sbjct: 246 TDGTRVVYSS-AGELWLLD--DLDGAEPRRL 273



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 55/319 (17%), Positives = 104/319 (32%), Gaps = 48/319 (15%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRY-- 205
           +  R+  HT  D  Y       G   +R+++ S           L ++D  DGA  R   
Sbjct: 228 SDLRR--HTPIDGFYARHAATDG---TRVVYSSA--------GELWLLDDLDGAEPRRLD 274

Query: 206 LTPSRDQILFEP------RF----SPN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           +     +   +P      R+    +P+   +  A +         V+ +  R   A    
Sbjct: 275 IRLGGQRADLQPHPVSAARWFGAAAPDHTGRGSAISVRGA-----VHWVTHRSGPARALA 329

Query: 254 GNFRSMILAPR-FSSNGKRALISVQKDEAMDIYSVDLQSNA-----TERLTNT-LFINIS 306
                    PR F  +G+  ++ V   E  D       + A       RL    L   + 
Sbjct: 330 AEHGVRARLPRTFRVDGEEHVVWVTDAEGEDALEFAPATGAAPGAIPRRLAAGQLGRVVG 389

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + +PD S+    S      ++ +++    + + + + ++      V+SP    +A++  
Sbjct: 390 LAMAPDGSRAAVASH---DGRVLLVEQETGEVREVDRSEDGDVTGLVFSPDSAWLAWSHP 446

Query: 367 SGEKFA-IGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL- 423
                  + +    D S            AP ++  G+ L F   +  D     +  DL 
Sbjct: 447 GPRPLRQLKLANTADLSVTEATPLRFRDYAPAFTLDGKHLAFLSARSFDPVYDEHVFDLA 506

Query: 424 --NGRNETLINTPAYASDP 440
              G    LI   A    P
Sbjct: 507 FVGGSRPHLITLAATTPSP 525



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 12/166 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +++++   +R +  S D  +    FSP+   +A+ ++     LR   +    D +  
Sbjct: 407 RVLLVEQETGEVREVDRSEDGDVTGLVFSPDSAWLAW-SHPGPRPLRQLKLANTADLSVT 465

Query: 252 RIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQ--SNATERLTNTLFINISA 307
                R    AP F+ +GK      +   D   D +  DL     +   L        S 
Sbjct: 466 EATPLRFRDYAPAFTLDGKHLAFLSARSFDPVYDEHVFDLAFVGGSRPHLITLAATTPSP 525

Query: 308 SYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            + P      F++ D++         S G+   RI  D       P
Sbjct: 526 -FGPQRHGRPFDAPDKDETP-----DSEGAPSTRIDLDGLGDRIVP 565


>gi|17230292|ref|NP_486840.1| WD repeat-containing protein [Nostoc sp. PCC 7120]
 gi|20140995|sp|Q8YTC2|Y2800_ANASP RecName: Full=Uncharacterized WD repeat-containing protein alr2800
 gi|17131893|dbj|BAB74499.1| WD-repeat protein [Nostoc sp. PCC 7120]
          Length = 1258

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 90/284 (31%), Gaps = 37/284 (13%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             R+W+VK  K ++             I    S+ +   +    G+  +           
Sbjct: 665 HVRVWEVKSGKLLL-------------ICRGHSNWVRFVVFSPDGEILAS--------CG 703

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L  + RDG  I+ LT   +  +F   F P+ + +A A+ D      + L D + 
Sbjct: 704 ADENVKLWSV-RDGVCIKTLT-GHEHEVFSVAFHPDGETLASASGDK----TIKLWDIQD 757

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + +      +    FS +G     S   D  + ++ V  Q      L +      S
Sbjct: 758 GTCLQTLTGHTDWVRCVAFSPDGNTLA-SSAADHTIKLWDVS-QGKCLRTLKSHTGWVRS 815

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++S D   +   S   G   + +   +  +  +       S +   +SP   ++     
Sbjct: 816 VAFSADGQTLASGS---GDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILV---S 869

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSR 408
                 I +           +     +  +  +SP G++L    
Sbjct: 870 GSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDGQTLACVS 913



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 60/320 (18%), Positives = 106/320 (33%), Gaps = 48/320 (15%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL--------- 178
             +LWDV   K +  +   S     R +A   S D  Q++    GD   +I          
Sbjct: 792  IKLWDVSQGKCL--RTLKSHTGWVRSVA--FSAD-GQTLASGSGDRTIKIWNYHTGECLK 846

Query: 179  -FVSESV--------------VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
             ++  +               VSG    ++ + D                +    FSP+ 
Sbjct: 847  TYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEVCSVAFSPDG 906

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            Q +A  + D      V L + R  +  K         L   FS + ++ L S   D+ + 
Sbjct: 907  QTLACVSLDQ----SVRLWNCRTGQCLKAWYGNTDWALPVAFSPD-RQILASGSNDKTVK 961

Query: 284  IYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++  D Q+      L          ++SPDS  +   S       + +   +     +I 
Sbjct: 962  LW--DWQTGKYISSLEGHTDFIYGIAFSPDSQTLASAST---DSSVRLWNISTGQCFQIL 1016

Query: 343  QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSN-LQAPTWSPS 400
             +     +  V+ PQG +IA          + +      Q  + L E S+ +    WSP 
Sbjct: 1017 LEHTDWVYAVVFHPQGKIIATGSADCT---VKLWNISTGQCLKTLSEHSDKILGMAWSPD 1073

Query: 401  GRSLIFSRKKDGDTGSKLYS 420
            G+ L        D   +L+ 
Sbjct: 1074 GQLLA---SASADQSVRLWD 1090



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 85/254 (33%), Gaps = 19/254 (7%)

Query: 172  DFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            DF   I F   S+++ S    +S+ + +        +       ++   F P  + +A  
Sbjct: 979  DFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKIIATG 1038

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            + D      V L +    +  K +      IL   +S +G+    S   D+++ ++    
Sbjct: 1039 SAD----CTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLA-SASADQSVRLWDC-C 1092

Query: 290  QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                   L        SA +SP+   I   S     + + +         +         
Sbjct: 1093 TGRCVGILRGHSNRVYSAIFSPNGEIIATCST---DQTVKIWDWQQGKCLKTLTGHTNWV 1149

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFS 407
            FD  +SP G ++A          + +   +  +     +     + +  +SP G  +   
Sbjct: 1150 FDIAFSPDGKILASASHDQT---VRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASG 1206

Query: 408  RKKDGDTGSKLYSI 421
             +   D   +++++
Sbjct: 1207 SQ---DQTVRIWNV 1217



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 54/142 (38%), Gaps = 11/142 (7%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            +       ++   FSPN + +A  + D      V + D +  +  K +    + +    F
Sbjct: 1099 ILRGHSNRVYSAIFSPNGEIIATCSTDQ----TVKIWDWQQGKCLKTLTGHTNWVFDIAF 1154

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREG 324
            S +GK  L S   D+ + I+  D+ +     +      +  S ++SPD   +   S    
Sbjct: 1155 SPDGK-ILASASHDQTVRIW--DVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQ--- 1208

Query: 325  KEQLYVMQSNGSDQKRISQDKE 346
             + + +      +  +I + K 
Sbjct: 1209 DQTVRIWNVKTGECLQILRAKR 1230



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 60/189 (31%), Gaps = 13/189 (6%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQI 316
             IL+  FS  G+        D    +   +++S     +            +SPD   +
Sbjct: 643 GNILSAAFSPEGQLLATC---DTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEIL 699

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                    E + +         +     E   F   + P G+ +A +    +   +  +
Sbjct: 700 ASC---GADENVKLWSVRDGVCIKTLTGHEHEVFSVAFHPDGETLA-SASGDKTIKLWDI 755

Query: 377 KKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           + DG+  + L   ++  +   +SP G +L        D   KL+ +       TL +   
Sbjct: 756 Q-DGTCLQTLTGHTDWVRCVAFSPDGNTLA---SSAADHTIKLWDVSQGKCLRTLKSHTG 811

Query: 436 YASDPQWVG 444
           +     +  
Sbjct: 812 WVRSVAFSA 820



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 51/125 (40%), Gaps = 9/125 (7%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T TL   +SA++SP+   +      +    + V +        I +         V+SP 
Sbjct: 639 TETLGNILSAAFSPEGQLLATC---DTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPD 695

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           G+++A +  + E   +  ++ DG   + L   +  + +  + P G +L       GD   
Sbjct: 696 GEILA-SCGADENVKLWSVR-DGVCIKTLTGHEHEVFSVAFHPDGETLA---SASGDKTI 750

Query: 417 KLYSI 421
           KL+ I
Sbjct: 751 KLWDI 755


>gi|284043771|ref|YP_003394111.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Conexibacter woesei DSM 14684]
 gi|283947992|gb|ADB50736.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Conexibacter woesei DSM 14684]
          Length = 654

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 74/211 (35%), Gaps = 39/211 (18%)

Query: 265 FSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            S +G+R L+ +   D   D ++  +       LT     + + ++ PD S +VF SDR 
Sbjct: 32  VSPDGRRDLVQLLAVDVGGDEWAAPVA------LTRLEATDTAPAWLPDGSGVVFLSDRA 85

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKF---------------- 366
           G+ QL+ +  +G+    ++         +P  SP G  +                     
Sbjct: 86  GERQLHRVGRDGAPPVALTGRPWGVCGVEPAVSPDGRTVVVGARAVPPRDRSEPYRVTDE 145

Query: 367 ----------SGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTG 415
                           +  +  DG +   L +   +  +  WSP G  L+      G+  
Sbjct: 146 MWRLEGVGLVRDAVAELFAVDADGGEPVQLTDHGAVPVSVAWSPDGGELLHLSFTLGERP 205

Query: 416 -SKLYSIDLNGRNETLI---NTPAYASDPQW 442
             +L ++ L  R E L+       +A    W
Sbjct: 206 CFQLRALRLADRAERLLWETPFEGFAPVAAW 236



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 74/224 (33%), Gaps = 32/224 (14%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +T +       +  VS      +++     +  D           +     P + P+  
Sbjct: 17  RLTRDGATAVCAVAGVSPDGRRDLVQLLAVDVGGDEWAAPVALTRLEATDTAPAWLPDGS 76

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQ----- 277
            V + +    +  R      R    P  +      +  + P  S +G+  ++  +     
Sbjct: 77  GVVFLSDRAGE--RQLHRVGRDGAPPVALTGRPWGVCGVEPAVSPDGRTVVVGARAVPPR 134

Query: 278 ---------------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                                +D   ++++VD       +LT+   + +S ++SPD  ++
Sbjct: 135 DRSEPYRVTDEMWRLEGVGLVRDAVAELFAVDADGGEPVQLTDHGAVPVSVAWSPDGGEL 194

Query: 317 VFESDREGKEQLYVMQS--NGSDQKRISQDKEASYFDPVWSPQG 358
           +  S   G+   + +++       +R+  +     F PV + +G
Sbjct: 195 LHLSFTLGERPCFQLRALRLADRAERLLWETPFEGFAPVAAWRG 238


>gi|238483775|ref|XP_002373126.1| wd40 protein, putative [Aspergillus flavus NRRL3357]
 gi|220701176|gb|EED57514.1| wd40 protein, putative [Aspergillus flavus NRRL3357]
          Length = 632

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 96/263 (36%), Gaps = 20/263 (7%)

Query: 167 TGEKGDFNSRILFVSES-----VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           T    D+++ ++ V  S     + SG   N++ + D +      +       +    FS 
Sbjct: 360 TINPWDYSNSVVSVDFSSNGQMIASGSKANTVKLWDPNTGQPLRVLEGHSDSVASVVFSF 419

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   +A  +YD      + L D++  +  + +      +++  FS +  + ++S   D  
Sbjct: 420 DSHMIASGSYDR----TIKLWDSKTGKQLRTLDGHSDSVVSVAFSPD-SQLVVSGSDDNT 474

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + ++  +        +        S ++SPD   +   S       + +  +N     R 
Sbjct: 475 IKLWDSN-TGQQLRTMRGHSDWVQSVAFSPDGQLVASGSY---DNTIMLWDTNTGQHLRT 530

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPS 400
            +   +      +SP G +IA   +  +   +    K G Q R L      +++ T+ P 
Sbjct: 531 LKGHSSLVGAVAFSPDGHMIASGSYD-KTVKLW-NTKTGQQLRTLEGHSGIVRSVTFLPD 588

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL 423
            +++        D+  KL+    
Sbjct: 589 SQTVASGSY---DSTIKLWDTTT 608



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/292 (17%), Positives = 99/292 (33%), Gaps = 33/292 (11%)

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +F    Q        N  +   + + + +       G++I  G     V  +LWD   
Sbjct: 342 SGLFPPDDQVLASGSKDNTINPWDYSN-SVVSVDFSSNGQMIASGSKANTV--KLWDPNT 398

Query: 136 RK---QIIGKKFFSSPASWRKIAHTISDDIYQS------------ITGEKGDFNSRILFV 180
            +    + G     +   +   +H I+   Y              +    G  +S +   
Sbjct: 399 GQPLRVLEGHSDSVASVVFSFDSHMIASGSYDRTIKLWDSKTGKQLRTLDGHSDSVVSVA 458

Query: 181 ----SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               S+ VVSG   N++ + D +              +    FSP+ Q VA  +YD+   
Sbjct: 459 FSPDSQLVVSGSDDNTIKLWDSNTGQQLRTMRGHSDWVQSVAFSPDGQLVASGSYDN--- 515

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATE 295
             + L DT   +  + +    S++ A  FS +G     S   D+ + ++  + ++     
Sbjct: 516 -TIMLWDTNTGQHLRTLKGHSSLVGAVAFSPDGHMIA-SGSYDKTVKLW--NTKTGQQLR 571

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            L     I  S ++ PDS  +   S       + +  +    + R  +    
Sbjct: 572 TLEGHSGIVRSVTFLPDSQTVASGSY---DSTIKLWDTTTGLELRTIRGHSG 620


>gi|167753157|ref|ZP_02425284.1| hypothetical protein ALIPUT_01428 [Alistipes putredinis DSM 17216]
 gi|167659471|gb|EDS03601.1| hypothetical protein ALIPUT_01428 [Alistipes putredinis DSM 17216]
          Length = 712

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 74/227 (32%), Gaps = 62/227 (27%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             +     S +  R L +V      +      IY  D  S    +LT+    N    ++ 
Sbjct: 51  GRVGLASLSPDASRLLYTVTWYNMQENRGVTAIYVRDAASGEVAQLTDFSSNNSDPKWNA 110

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------ 365
           D S+I F SDR G  Q++ M ++G + +++S+  +      V +P GD + + +      
Sbjct: 111 DGSKIYFLSDRSGSSQIWEMAADGQNPRQLSKLDKDIEGFGV-NPAGDKVFYVQGVQVAD 169

Query: 366 -----------------------------FSGEKFAIGVMKKD----GSQERLLVEDSNL 392
                                          GE   I + +      G    ++ E +  
Sbjct: 170 RKSSDIHPDMAESKARVYDDLMCRHWDRWDEGEYRHIFIAELTSGGIGKGVDIIGEGAEW 229

Query: 393 QAP----------TWSPSGRSLIFS------RKKDGDTGSKLYSIDL 423
             P           W+P G  L ++       K    T S ++  D 
Sbjct: 230 DTPLAPYFDMSEIAWAPDGTRLAYTCKPLTGAKYAVSTDSDIFVYDT 276



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 59/335 (17%), Positives = 111/335 (33%), Gaps = 88/335 (26%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA----- 229
           S+I F+S+   S    + +  M  DG N R L+     I      +P   KV Y      
Sbjct: 113 SKIYFLSDRSGS----SQIWEMAADGQNPRQLSKLDKDIEGF-GVNPAGDKVFYVQGVQV 167

Query: 230 -----------------------------TYDDEDILRVYLMDTRIDRAPKRI-----GN 255
                                         +D+ +   +++ +       K +     G 
Sbjct: 168 ADRKSSDIHPDMAESKARVYDDLMCRHWDRWDEGEYRHIFIAELTSGGIGKGVDIIGEGA 227

Query: 256 FRSMILAP-------RFSSNGKRALIS--------VQKDEAMDIYSVDLQSNATERL--- 297
                LAP        ++ +G R   +               DI+  D ++ AT  +   
Sbjct: 228 EWDTPLAPYFDMSEIAWAPDGTRLAYTCKPLTGAKYAVSTDSDIFVYDTETGATTNICKG 287

Query: 298 ------------TNTL--FINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQ 338
                       T       +    +SPD ++I F S R       KE+L V  S     
Sbjct: 288 LTPISGHDAAAKTELPFVGYDKYPVFSPDGTKIAFRSQRRAGNEADKERLMVWNSETGLV 347

Query: 339 KRISQDKEASYFDPVWSPQG-DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           K ++++ + +  + +W   G + + F         +  +  +G+   L   D ++ A + 
Sbjct: 348 KELTKNFDYNATNVIW--DGSEALWFLAPMEATHQLCRVDMNGNVSVLTRGDHDINAVSI 405

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431
           + +G+++           S+LY IDL +G    L 
Sbjct: 406 A-NGKAVADICTISSP--SELYEIDLKDGAITQLT 437



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/269 (12%), Positives = 83/269 (30%), Gaps = 79/269 (29%)

Query: 220 SPNQQKVAYA-----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+  ++ Y        ++  +  +Y+ D       + + +F S    P+++++G +   
Sbjct: 59  SPDASRLLYTVTWYNMQENRGVTAIYVRDAASGEVAQ-LTDFSSNNSDPKWNADGSKIYF 117

Query: 275 SVQKDEAMDIYSVDLQSNATERLT----NTLFINISAS-------------------YSP 311
              +  +  I+ +        +L+    +     ++ +                     P
Sbjct: 118 LSDRSGSSQIWEMAADGQNPRQLSKLDKDIEGFGVNPAGDKVFYVQGVQVADRKSSDIHP 177

Query: 312 D---SSQIVF---------ESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDP------ 352
           D   S   V+           D      +++ +  +G   K +    E + +D       
Sbjct: 178 DMAESKARVYDDLMCRHWDRWDEGEYRHIFIAELTSGGIGKGVDIIGEGAEWDTPLAPYF 237

Query: 353 -----VWSPQGDLIAFT--KFSGEKF------AIGVMKKDGSQERLLVED---------- 389
                 W+P G  +A+T    +G K+       I V   +      + +           
Sbjct: 238 DMSEIAWAPDGTRLAYTCKPLTGAKYAVSTDSDIFVYDTETGATTNICKGLTPISGHDAA 297

Query: 390 --------SNLQAPTWSPSGRSLIFSRKK 410
                      + P +SP G  + F  ++
Sbjct: 298 AKTELPFVGYDKYPVFSPDGTKIAFRSQR 326



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 9/133 (6%)

Query: 216 EPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            P FSP+  K+A+ +        D  R+ + ++      +   NF        +  +G  
Sbjct: 310 YPVFSPDGTKIAFRSQRRAGNEADKERLMVWNSETGLVKELTKNFDYNATNVIW--DGSE 367

Query: 272 ALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           AL  +   EA   +  VD+       LT     +I+A    +   +          +LY 
Sbjct: 368 ALWFLAPMEATHQLCRVDMN-GNVSVLTRGDH-DINAVSIANGKAVADICTISSPSELYE 425

Query: 331 MQSNGSDQKRISQ 343
           +        +++ 
Sbjct: 426 IDLKDGAITQLTF 438


>gi|256841673|ref|ZP_05547179.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256736567|gb|EEU49895.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 489

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 69/479 (14%), Positives = 151/479 (31%), Gaps = 113/479 (23%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSP------VSI--AFTKFVSIDELGGKV 65
           ++++C ++  + G          +      +  P      V +  A   F  +D+    +
Sbjct: 3   RLSICWIIGCLLGLVACRPEVPAQAEQGETDVFPDYREVTVPVNMAPPNFKLVDQQLQGI 62

Query: 66  SE--------VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +         +++ D     VFNL                    DW +L           
Sbjct: 63  TRLKTMNRELIIAAD---HGVFNLPET-----------------DWKTLSQDA------- 95

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSR 176
                              KQI    +F  P + W+++    S  IY S          R
Sbjct: 96  -----------------QGKQIDVTVYFREPQSDWKQM----SFPIYVSRDSVDAYLVYR 134

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            +F    + + +     CV +    +I    + +   +          +++ +      +
Sbjct: 135 RIFPGYRMWNEMGIYQRCVENYVEKSILDNQSTNNSCMNCHAFCERQGEQMLFHQRGSHN 194

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------DEAMDIYSVD 288
              +         A +R G   S +  P +  +G+    S  +        +   I   D
Sbjct: 195 GTYLIDHRQVKTIALERDGKPASFVY-PYWHPSGRYVAFSTNETHQDFHLSDENRIEVYD 253

Query: 289 LQS------NATERLTNTL------FINISASYSPDSSQIVFES---------DREGKEQ 327
           ++S         ER+ ++             +++PD + ++F S          R+ +  
Sbjct: 254 VESDVLIYDTEKERVFSSPLLASMACYETFPTFTPDGNYLLFCSADSVCMPENYRDVRYN 313

Query: 328 LYVMQSN------GSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIG----- 374
           L  +  +      G+    +   +EA      P  SP G  + +T      F+I      
Sbjct: 314 LLRVAFDLEDGSIGTQVDTLYNAREAGRSVKFPRVSPDGKRLLYTVSDYGNFSIWHKDAD 373

Query: 375 --VMKKDGSQERLL--VEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             ++         L  V   ++++  +WS + R  +FS ++D    ++ Y + +N R +
Sbjct: 374 LYMLDLSTGAIDSLPEVNSPDVESYHSWSGNSRWFVFSSRRDDGLFTRPYLVHVNERGQ 432


>gi|119488491|ref|ZP_01621664.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
 gi|119455302|gb|EAW36442.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
          Length = 1540

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 94/248 (37%), Gaps = 26/248 (10%)

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
            N  +L   R  +     F P+ + +A  ++D      V           +   N    I 
Sbjct: 902  NYNHLEGHRSGVQTV-AFRPDGEMMATVSWDG----TVKFWQPDGSLLNRPWLNNLKNIS 956

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            A  FS + K    +  K   +     +L      RL    +  ++ ++SPDS  I   S 
Sbjct: 957  AVAFSPDSKIIATASGKTVTLW----NLNGKMLNRLEGHKYTVVALAFSPDSQIIATASG 1012

Query: 322  --REGKEQLYVMQSNGSDQKRISQDKEASY---FDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                G+  + + + +G+  K +   K ++        +SP G +IA   + G   A+ + 
Sbjct: 1013 DAASGQGAVQLWRQDGTLLKTLEDQKNSNLDFQLTVAFSPDGKMIASGGWHG---ALRLW 1069

Query: 377  KKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            KKDG+     +  ++ +   ++SP+ + +       G     +Y   ++G   TL  T +
Sbjct: 1070 KKDGTSITHTLLGADAINTVSFSPNSQIIA-----TGTANGSVYIHQVDG---TLATTFS 1121

Query: 436  YASDPQWV 443
               D  W 
Sbjct: 1122 GDKDGVWG 1129



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 87/233 (37%), Gaps = 15/233 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDT 244
            +      + +   DG  I+ L     + +    FSP+ Q +A A+ D    + +      
Sbjct: 1263 TASGDQYVRLWKSDGILIKPLERHSGKFVGV-SFSPDSQVIAAASDDGTVKLWKRQASGE 1321

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER----LTNT 300
               R    +      + A  FS  G+    +   D+ + ++  +     + R    LT  
Sbjct: 1322 FSSRPDTTLSGHTQAVRAVAFSPEGQIIA-TASDDQTVKLWKREAAGEFSSRPNNTLTGH 1380

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR---ISQDKEASYFDPVWSPQ 357
                 + ++SPD   I   S+ +   +L+  Q++G    R          +     +SP 
Sbjct: 1381 TQAVRAVAFSPDGEIIAAASN-DQTIKLWKRQASGEFSSRPHNTLTGHTQAVRAVAFSPD 1439

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRK 409
            G++IA          I + K DG+  + L    +  +   +SP G++L  + K
Sbjct: 1440 GEIIATASNDQT---IKLWKTDGTLIKTLTGHRDAVSAIAFSPDGKTLASASK 1489



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 95/290 (32%), Gaps = 34/290 (11%)

Query: 147  SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
             P      A      IY       G            + +     ++ + +R+G  ++  
Sbjct: 1193 KPNQPPMPALKPGSQIYAVRFSPDG----------RQIATTSGYGTVTLWNREGTLLKT- 1241

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                D  +    FSP  Q +A A+ D    +R++  D       K +       +   FS
Sbjct: 1242 GEWHDGPVVGIDFSPEGQIIATASGD--QYVRLWKSD---GILIKPLERHSGKFVGVSFS 1296

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDR 322
             + +    +   D  + ++        + R   TL  +  A    ++SP+   I   SD 
Sbjct: 1297 PDSQVIA-AASDDGTVKLWKRQASGEFSSRPDTTLSGHTQAVRAVAFSPEGQIIATASD- 1354

Query: 323  EGKEQLYVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            +   +L+  ++ G    R          +     +SP G++IA    + +   +   +  
Sbjct: 1355 DQTVKLWKREAAGEFSSRPNNTLTGHTQAVRAVAFSPDGEIIAAAS-NDQTIKLWKRQAS 1413

Query: 380  G----SQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            G         L      ++A  +SP G  +  +     D   KL+  D  
Sbjct: 1414 GEFSSRPHNTLTGHTQAVRAVAFSPDGEIIATASN---DQTIKLWKTDGT 1460



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 89/246 (36%), Gaps = 27/246 (10%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                ++     DG+ +     +  + +    FSP+ + +A A+      + ++ ++    
Sbjct: 929  SWDGTVKFWQPDGSLLNRPWLNNLKNISAVAFSPDSKIIATAS---GKTVTLWNLN---G 982

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFI 303
            +   R+   +  ++A  FS + +    +         A+ ++  D      + L +    
Sbjct: 983  KMLNRLEGHKYTVVALAFSPDSQIIATASGDAASGQGAVQLWRQD--GTLLKTLEDQKNS 1040

Query: 304  NISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            N+      ++SPD   I           L + + +G+     +     +     +SP   
Sbjct: 1041 NLDFQLTVAFSPDGKMIA---SGGWHGALRLWKKDGTSITH-TLLGADAINTVSFSPNSQ 1096

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +IA    +G    + + + DG+       D + +   ++SP+G  +        D   KL
Sbjct: 1097 IIATGTANGS---VYIHQVDGTLATTFSGDKDGVWGVSFSPNGEIIA---TAGSDRTVKL 1150

Query: 419  YSIDLN 424
            + +D  
Sbjct: 1151 WKLDGT 1156



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 81/240 (33%), Gaps = 18/240 (7%)

Query: 159  SDDIYQS-ITGEKGDFNSRILFVSESV---VSGIIKNSLCVMDRDGA---NIRYLTPSRD 211
            SD I    +    G F          V    S      L      G              
Sbjct: 1275 SDGILIKPLERHSGKFVGVSFSPDSQVIAAASDDGTVKLWKRQASGEFSSRPDTTLSGHT 1334

Query: 212  QILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            Q +    FSP  Q +A A+ D    + +         R    +      + A  FS +G+
Sbjct: 1335 QAVRAVAFSPEGQIIATASDDQTVKLWKREAAGEFSSRPNNTLTGHTQAVRAVAFSPDGE 1394

Query: 271  RALISVQKDEAMDIYSVDLQSNATER----LTNTLFINISASYSPDSSQIVFESDREGKE 326
                +   D+ + ++        + R    LT       + ++SPD   I   S+    +
Sbjct: 1395 IIA-AASNDQTIKLWKRQASGEFSSRPHNTLTGHTQAVRAVAFSPDGEIIATASN---DQ 1450

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             + + +++G+  K ++  ++A      +SP G  +A +    +   +   +++   ERLL
Sbjct: 1451 TIKLWKTDGTLIKTLTGHRDA-VSAIAFSPDGKTLA-SASKDKTVILWNWQENLGIERLL 1508



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 104/293 (35%), Gaps = 24/293 (8%)

Query: 146  SSPASWRKIAHTISDDIYQSITGEK-GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            +  A+     H +   +  + +G+K G +        E + +     ++ +   DG  + 
Sbjct: 1100 TGTANGSVYIHQVDGTLATTFSGDKDGVWGVSFSPNGEIIATAGSDRTVKLWKLDGTLVN 1159

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             L   R+ +L    FS     +A A+ D        +   + ++ P       S I A R
Sbjct: 1160 TLQGHRNVVLAV-AFSRQGSMIASASDDG------TIKLWKPNQPPMPALKPGSQIYAVR 1212

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS +G++   +      + ++  + +    +         +   +SP+   I   S   G
Sbjct: 1213 FSPDGRQIA-TTSGYGTVTLW--NREGTLLKTGEWHDGPVVGIDFSPEGQIIATAS---G 1266

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--- 381
             + + + +S+G   K + +     +    +SP   +IA     G    +   +  G    
Sbjct: 1267 DQYVRLWKSDGILIKPL-ERHSGKFVGVSFSPDSQVIAAASDDGTV-KLWKRQASGEFSS 1324

Query: 382  --QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                 L      ++A  +SP G+ +  +     D   KL+  +  G   +  N
Sbjct: 1325 RPDTTLSGHTQAVRAVAFSPEGQIIATASD---DQTVKLWKREAAGEFSSRPN 1374



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 91/294 (30%), Gaps = 27/294 (9%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
            I      Q I         + W S     ++   + +     + V F      D + I  
Sbjct: 1252 IDFSPEGQIIATASGDQYVRLWKS---DGILIKPLERHSGKFVGVSFS----PDSQVIAA 1304

Query: 142  KKFFSSPASW-RKIAHTIS---DDIYQSITG--EKGDFNSRILFVSESVVSGIIKNSLCV 195
                 +   W R+ +   S   D      T       F+     ++ +     +K  L  
Sbjct: 1305 ASDDGTVKLWKRQASGEFSSRPDTTLSGHTQAVRAVAFSPEGQIIATASDDQTVK--LWK 1362

Query: 196  MDRDGA---NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPK 251
             +  G              Q +    FSP+ + +A A+ D    + +         R   
Sbjct: 1363 REAAGEFSSRPNNTLTGHTQAVRAVAFSPDGEIIAAASNDQTIKLWKRQASGEFSSRPHN 1422

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             +      + A  FS +G+    +   D+ + ++  D      + LT       + ++SP
Sbjct: 1423 TLTGHTQAVRAVAFSPDGEIIA-TASNDQTIKLWKTD--GTLIKTLTGHRDAVSAIAFSP 1479

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLI 361
            D   +   S ++    L+  Q N   ++ +       ++    +P  S +   +
Sbjct: 1480 DGKTLASAS-KDKTVILWNWQENLGIERLLELGCDWVRDYLKTNPNMSDRDKRL 1532



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 71/260 (27%), Gaps = 34/260 (13%)

Query: 49   SIAFTKFVSIDEL-----GGKVSEVVSKD------LQR-SDVFNLISQDSFKQKITNPDS 96
             +    F    ++     G +   +   D      L+R S  F  +S     Q I     
Sbjct: 1248 PVVGIDFSPEGQIIATASGDQYVRLWKSDGILIKPLERHSGKFVGVSFSPDSQVIAAASD 1307

Query: 97   IPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD----RKQIIGKKFFSSPASW- 151
                + W         +G         L    +           + I       +   W 
Sbjct: 1308 DGTVKLWKRQ-----ASGEFSSRPDTTLSGHTQAVRAVAFSPEGQIIATASDDQTVKLWK 1362

Query: 152  RKIAHTISDDIYQSITGEKGDFNSRILFVSES---VVSGIIKNSLCVMDRDGA---NIRY 205
            R+ A   S     ++TG      +             S      L      G        
Sbjct: 1363 REAAGEFSSRPNNTLTGHTQAVRAVAFSPDGEIIAAASNDQTIKLWKRQASGEFSSRPHN 1422

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                  Q +    FSP+ + +A A+ D      + L  T      K +   R  + A  F
Sbjct: 1423 TLTGHTQAVRAVAFSPDGEIIATASNDQ----TIKLWKTD-GTLIKTLTGHRDAVSAIAF 1477

Query: 266  SSNGKRALISVQKDEAMDIY 285
            S +GK    S  KD+ + ++
Sbjct: 1478 SPDGKTLA-SASKDKTVILW 1496


>gi|37520744|ref|NP_924121.1| WD repeat-containing protein [Gloeobacter violaceus PCC 7421]
 gi|35211739|dbj|BAC89116.1| WD-repeat protein [Gloeobacter violaceus PCC 7421]
          Length = 1183

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 81/221 (36%), Gaps = 13/221 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S  +  ++ +       ++      ++ +    F+P+   +A  + D      + L D +
Sbjct: 625 SAGLDGTIRLWQVVSGQLQATLTGHNKGVRSVAFAPDGHLIASGSLDG----TIKLWDAQ 680

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +    +   R+++ +  +S +G+    S   D  +  +   +       L        
Sbjct: 681 SGQCRLTLTGHRNVVASVVWSPDGQYLA-SGSNDGTVKFWR-PVGGRCLRTLRGHTDEVW 738

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++ PDS  ++  S  +G  +++   ++G   K+     +       WS  G  +A   
Sbjct: 739 SVAFGPDSRTLLSGSS-DGTLRMW--DTHGGTCKQALSGHQDKVRTVAWSLDGQRLASGS 795

Query: 366 FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
           +      + V   DG  + +L      +++  ++P G  L 
Sbjct: 796 WDAT---VRVWNADGRCQSILRGHSGIIRSVAFAPDGGLLA 833



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 77/232 (33%), Gaps = 21/232 (9%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R++       +    FSP+ + +A A  D      + L      +    +      + +
Sbjct: 600 QRFVCAGHSGWVEGLAFSPDSEILASAGLDG----TIRLWQVVSGQLQATLTGHNKGVRS 655

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESD 321
             F+ +G     S   D  + ++  D QS      LT    +  S  +SPD   +   S+
Sbjct: 656 VAFAPDGHLIA-SGSLDGTIKLW--DAQSGQCRLTLTGHRNVVASVVWSPDGQYLASGSN 712

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +G  + +  +  G    R  +      +   + P    +      G    + +    G 
Sbjct: 713 -DGTVKFW--RPVGGRCLRTLRGHTDEVWSVAFGPDSRTLLSGSSDGT---LRMWDTHGG 766

Query: 382 QERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             +  +     +     WS  G+ L       G   + +   + +GR ++++
Sbjct: 767 TCKQALSGHQDKVRTVAWSLDGQRLA-----SGSWDATVRVWNADGRCQSIL 813



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 82/240 (34%), Gaps = 18/240 (7%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++ SG   + + +   +      +       ++   F+P    +A A+ D      V L 
Sbjct: 872  TLASGDADHRVRIWSTEDGRCTRVLSGHTHPIWSVAFAPGGATLASASADH----AVRLW 927

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            D    R    +    S + +  FS +G+R   S   D  + ++  D  +    R T+T  
Sbjct: 928  DGASGRCTHILQGHTSWVWSVAFSPDGRRLA-SGGADRTVRLW--DTATGQCLR-TSTEA 983

Query: 303  INI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             +   + ++ PD   +    D    + + +  +      R      +  +    S  G L
Sbjct: 984  DHRVLAVAFMPDGLTLAGSVD----QTVRLWDAATGRCLRTLAGHTSWIWSLAASADGRL 1039

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +A T  +     I  +      + L      + +  +SP  R L        D   +L+S
Sbjct: 1040 MA-TGSADRSVRIWEVATGRCLKHLEEHGGWVWSVAFSPDERRLAVGSM---DGTIRLWS 1095



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 104/349 (29%), Gaps = 77/349 (22%)

Query: 120  GKDRLRVEFRLWDVKDRK---QIIGKKFFSSPASW----RKIAHTISDDIYQSITGEKG- 171
                L    +LWD +  +    + G +   +   W    + +A   +D   +      G 
Sbjct: 666  ASGSLDGTIKLWDAQSGQCRLTLTGHRNVVASVVWSPDGQYLASGSNDGTVKFWRPVGGR 725

Query: 172  -----------DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
                        ++      S +++SG    +L + D  G   +         +    +S
Sbjct: 726  CLRTLRGHTDEVWSVAFGPDSRTLLSGSSDGTLRMWDTHGGTCKQALSGHQDKVRTVAWS 785

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
             + Q++A  ++D    +RV+  D    R    +     +I +  F+ +G     +   D+
Sbjct: 786  LDGQRLASGSWDA--TVRVWNAD---GRCQSILRGHSGIIRSVAFAPDGGLLA-TGSIDQ 839

Query: 281  AMDIYSVDLQSNATE--------------------------------------RLTNTLF 302
             + ++  DLQS                                          R T  L 
Sbjct: 840  TVKLW--DLQSGQCVYSFKGHSGGVAAVAVGGHGTLASGDADHRVRIWSTEDGRCTRVLS 897

Query: 303  INISASYS----PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             +    +S    P  + +   S       + +          I Q   +  +   +SP G
Sbjct: 898  GHTHPIWSVAFAPGGATLASAS---ADHAVRLWDGASGRCTHILQGHTSWVWSVAFSPDG 954

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
              +A     G    + +      Q      +++ +  A  + P G +L 
Sbjct: 955  RRLA---SGGADRTVRLWDTATGQCLRTSTEADHRVLAVAFMPDGLTLA 1000



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 67/202 (33%), Gaps = 28/202 (13%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVF 318
           +LA  FS +G+   ++  + E         QS     +           ++SPDS  +  
Sbjct: 569 VLALAFSPDGRWLAMADTRGEVRLCLV---QSREQRFVCAGHSGWVEGLAFSPDSEILA- 624

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +  +G  +L+ +       +              ++P G LIA     G    I +   
Sbjct: 625 SAGLDGTIRLWQVV--SGQLQATLTGHNKGVRSVAFAPDGHLIASGSLDGT---IKLWDA 679

Query: 379 DGSQERLLVEDSNLQAPT--WSPSGRSLI---------FSRKKDGD-------TGSKLYS 420
              Q RL +        +  WSP G+ L          F R   G           +++S
Sbjct: 680 QSGQCRLTLTGHRNVVASVVWSPDGQYLASGSNDGTVKFWRPVGGRCLRTLRGHTDEVWS 739

Query: 421 IDLNGRNETLINTPAYASDPQW 442
           +     + TL++  +  +   W
Sbjct: 740 VAFGPDSRTLLSGSSDGTLRMW 761


>gi|302518996|ref|ZP_07271338.1| protease [Streptomyces sp. SPB78]
 gi|302427891|gb|EFK99706.1| protease [Streptomyces sp. SPB78]
          Length = 1074

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 69/192 (35%), Gaps = 21/192 (10%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+    + + D    ++   L      R++           SPD + + + S REG  ++
Sbjct: 14  GEFIAFTAEDD----VWIAPLDGGRAWRVSADNVPVQHPRISPDGATVAWTSKREGAPEV 69

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL 385
           +V    G   +R++           W+ +GD++A T              +  DGS  R 
Sbjct: 70  FVAPLEGGPARRLTYWGSNKTSVRGWTAEGDVVAITSHGQPSLRRTWAHALPLDGSASRR 129

Query: 386 LVE---DSNLQAP--------TWSPSGRSLIFSRKKDGDTGSKLYS-IDLNGRNETL-IN 432
           L      +    P        + S  GR   + ++  G T  KL+   D  G  + +  +
Sbjct: 130 LPYGPIGALAHEPEGERVLLGSVS-MGREAAWWKRYRGGTAGKLWLGPDAEGAWQRVHAD 188

Query: 433 TPAYASDPQWVG 444
                 DP WVG
Sbjct: 189 LDGNIEDPLWVG 200



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 95/261 (36%), Gaps = 33/261 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +   DG    +   + +  +  PR SP+   VA+ +   E    V++         +
Sbjct: 24  DVWIAPLDGGRA-WRVSADNVPVQHPRISPDGATVAWTS-KREGAPEVFVAPLE-GGPAR 80

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTNTLFINISA 307
           R+  + S   + R +++ G    I+            +++ L  +A+ RL       ++ 
Sbjct: 81  RLTYWGSNKTSVRGWTAEGDVVAITSHGQPSLRRTWAHALPLDGSASRRLPYGPIGALAH 140

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-------------KRISQDKEASYFDPVW 354
              P+  +++  S   G+E  +  +  G                +R+  D + +  DP+W
Sbjct: 141 E--PEGERVLLGSVSMGREAAWWKRYRGGTAGKLWLGPDAEGAWQRVHADLDGNIEDPLW 198

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDG 412
              G  IAF        A+     +GS  R    VE     A   +  G  ++++     
Sbjct: 199 V--GGRIAFLSDHEGVGALYSSLPNGSDLRRHSPVEPDGFYARQAATDGTRVVWAS---- 252

Query: 413 DTGSKLYSI-DLNGRNETLIN 432
               +L+ I DL G     ++
Sbjct: 253 --AGRLWIIDDLEGAEPRPLD 271



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 81/229 (35%), Gaps = 36/229 (15%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A+   DD     V++      RA  R+      +  PR S +G     + +++ A 
Sbjct: 14  GEFIAFTAEDD-----VWIAPLDGGRAW-RVSADNVPVQHPRISPDGATVAWTSKREGAP 67

Query: 283 DIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYV-----MQSNGS 336
           +++   L+     RLT       S   ++ +   +   S   G+  L       +  +GS
Sbjct: 68  EVFVAPLEGGPARRLTYWGSNKTSVRGWTAEGDVVAITSH--GQPSLRRTWAHALPLDGS 125

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTK-------------FSGEKFAIGV-MKKDGSQ 382
             +R+      +       P+G+ +                   G    + +    +G+ 
Sbjct: 126 ASRRLPYGPIGALAHE---PEGERVLLGSVSMGREAAWWKRYRGGTAGKLWLGPDAEGAW 182

Query: 383 ERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +R+  + D N++ P W   G  + F    +G     LYS   NG +   
Sbjct: 183 QRVHADLDGNIEDPLWV--GGRIAFLSDHEG--VGALYSSLPNGSDLRR 227



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 95/295 (32%), Gaps = 27/295 (9%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRY--LTPSRDQILFEPRFSPNQQK 225
           E   F +R      + V       L ++D  +GA  R   +     +   +P   P  + 
Sbjct: 232 EPDGFYARQAATDGTRVVWASAGRLWIIDDLEGAEPRPLDIGLGGQRADLQPFAIPASRW 291

Query: 226 VAYATYDDEDILRVYL------MDTRIDRAPKRIGNFRSM-ILAPR-FSSNGK-RALISV 276
           ++ A  D        L        T  D   + +   + +    PR F  +G+       
Sbjct: 292 LSAARPDHTGRGSAVLVRGAVHWVTHRDGPARVLAGEQGVRARLPRTFRLDGEEWVAWVT 351

Query: 277 QKDEAMDIYSVDLQSNAT----ERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVM 331
             +    I        A      R+        +S + +PD  ++   S      ++ ++
Sbjct: 352 DAEGEDAIEFAPATGTAPGTAPRRIARGKLGRVLSFTVAPDGERLGVASH---DGRVLLV 408

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAIGVMKKDGSQERLLVE 388
           + +  + + + + +       V+SP    +A++    +   +  +  +  D +       
Sbjct: 409 ERSSGEVREVDRSENGDASGLVFSPDSTWLAWSHPGPDPLRQLKLAHVS-DLAPVEATPL 467

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLINTPAYASDP 440
                +P ++P G+ L F   +  D     ++ DL         LI   A    P
Sbjct: 468 RFKDYSPAFTPDGKHLAFLSDRAFDPLYDAHNFDLAFIGTTRPHLITLAATTPSP 522


>gi|254421317|ref|ZP_05035035.1| YD repeat protein [Synechococcus sp. PCC 7335]
 gi|196188806|gb|EDX83770.1| YD repeat protein [Synechococcus sp. PCC 7335]
          Length = 708

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 90/210 (42%), Gaps = 18/210 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A A+ +      V L +    +  +      + +    FS NGK    S  
Sbjct: 455 SFSPDGETLATASLNG----TVKLWNVN-GQELQTFAGHSNYVYDVSFSPNGKMLA-SAS 508

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D  + ++  ++     +            S+SPD   I   S+ +G  +L+    +G  
Sbjct: 509 EDGTVKLW--NVNGQELKTFAGHSGGVNGVSFSPDGEVIASASE-DGTVKLW--NLSGQS 563

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPT 396
            + +    +    D  +SP G++IA     G    + +   +G + + LV+    + +  
Sbjct: 564 LQTLIGHSDG-VNDVSFSPDGEVIASASKDG---RVKLWNLEGQELQTLVDGSGRVSSVR 619

Query: 397 WSPSGRSLIFSRK--KDGDTGSKLYSIDLN 424
           +SP+G++L+      ++G++   +++ D++
Sbjct: 620 FSPNGKALVSVDGDIEEGNSRVIIWNFDVD 649



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 69/393 (17%), Positives = 143/393 (36%), Gaps = 47/393 (11%)

Query: 59  DELGGKVSEVVSKDL---QRSDVFNLISQDSFK--QKITNPDSIPRFQDWNSLGAQVLVT 113
           D  G +V  +V  DL   +RSD  +++        Q I         + W+  G ++   
Sbjct: 270 DRNGQQVLSLVG-DLDSRERSD--SILDASFSPNGQTIVAVSQNGTVRLWDKRGQEL--- 323

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
               +       V F      D + I       +   W    H    ++       +   
Sbjct: 324 ----QTLDGSGTVRFS----PDGETIAAVGQNHTIKLW----HRQRQELPTLAGHSRWAS 371

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +       ES+VS    +++ + + +G  ++ L    + +      SPN + +A    D 
Sbjct: 372 DVSFWPDGESIVSLGQNHTVKLWNLNGEVLQNLIGYINGLKSVSA-SPNGEMLALLYSDG 430

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              LR       +D   + +    + I +  FS +G+    +   +  + ++  ++    
Sbjct: 431 TAELR------NLDSQARTVIKHSTSIRSVSFSPDGETLA-TASLNGTVKLW--NVNGQE 481

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            +            S+SP+   +   S+ +G  +L+    NG + K  +           
Sbjct: 482 LQTFAGHSNYVYDVSFSPNGKMLASASE-DGTVKLW--NVNGQELKTFA-GHSGGVNGVS 537

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDG 412
           +SP G++IA     G    + +    G   + L+  S+ +   ++SP G  +  S  KDG
Sbjct: 538 FSPDGEVIASASEDGT---VKLWNLSGQSLQTLIGHSDGVNDVSFSPDGEVIA-SASKDG 593

Query: 413 DTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
               KL+  +L G+  +TL++     S  ++  
Sbjct: 594 RV--KLW--NLEGQELQTLVDGSGRVSSVRFSP 622



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 64/389 (16%), Positives = 135/389 (34%), Gaps = 52/389 (13%)

Query: 73  LQRSDV--------FNLISQDSF---KQKITNPDSIPRFQDWNSLGAQVL-VTGRV--IK 118
           L +S          F  I    F    + + +       + W+  G QVL + G +   +
Sbjct: 228 LNKSGQLLTTFAAHFQNIESMGFSADGETLISAGGDGLVKLWDRNGQQVLSLVGDLDSRE 287

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
                L   F      + + I+      +   W        D   Q +    G    R  
Sbjct: 288 RSDSILDASFS----PNGQTIVAVSQNGTVRLW--------DKRGQELQTLDGSGTVRFS 335

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
              E++ +    +++ +  R    +  L     +   +  F P+ + +            
Sbjct: 336 PDGETIAAVGQNHTIKLWHRQRQELPTL-AGHSRWASDVSFWPDGESIV----SLGQNHT 390

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V L +   +     IG    +      S NG+   + +  D   ++   +L S A   + 
Sbjct: 391 VKLWNLNGEVLQNLIGYINGLKSVSA-SPNGEMLAL-LYSDGTAELR--NLDSQARTVIK 446

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQ 357
           ++  I  S S+SPD   +   S       + +   NG + +  +    ++Y +D  +SP 
Sbjct: 447 HSTSI-RSVSFSPDGETLATASL---NGTVKLWNVNGQELQ--TFAGHSNYVYDVSFSPN 500

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           G ++A     G    + +   +G + +        +   ++SP G  +  + +   D   
Sbjct: 501 GKMLASASEDGT---VKLWNVNGQELKTFAGHSGGVNGVSFSPDGEVIASASE---DGTV 554

Query: 417 KLYSIDLNGRN-ETLINTPAYASDPQWVG 444
           KL+  +L+G++ +TLI      +D  +  
Sbjct: 555 KLW--NLSGQSLQTLIGHSDGVNDVSFSP 581



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 89/245 (36%), Gaps = 30/245 (12%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG             +    FSP+ + +  A+ D      V L D R      R      
Sbjct: 69  DGYLFSNRLIGHSSRVTSMSFSPDGEILVSASEDG----TVKLWDKRGQEI--RTLEHSG 122

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            + +  FS NG+    + + D+ + ++  D      + L        +  + PD   ++ 
Sbjct: 123 RVHSVSFSPNGETIAAAGE-DKTVKLW--DRSGRNIQTL-EHDGRVTNVDFFPDGEMLIT 178

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S       + +   +G + + +  D  A   D   SP G+ +A  +       + ++ K
Sbjct: 179 VSQ---NNTVKLWNRDGQEIRTLEYDG-AYIRDVSISPNGETLAIAQ----GHEVMLLNK 230

Query: 379 DGSQERLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            G   +LL   +    N+++  +S  G +LI      GD   KL+  D NG+    +   
Sbjct: 231 SG---QLLTTFAAHFQNIESMGFSADGETLI---SAGGDGLVKLW--DRNGQQVLSLVGD 282

Query: 435 AYASD 439
             + +
Sbjct: 283 LDSRE 287



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 57/151 (37%), Gaps = 11/151 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + + +G  ++        +     FSP+ + +A A+ D      V L +  
Sbjct: 506 SASEDGTVKLWNVNGQELKTFAGHSGGVNGV-SFSPDGEVIASASEDG----TVKLWNLS 560

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  IG+   +     FS +G+    S  KD  + ++  +L+    + L +      
Sbjct: 561 GQSLQTLIGHSDGVN-DVSFSPDGEVIA-SASKDGRVKLW--NLEGQELQTLVDGSGRVS 616

Query: 306 SASYSPDSSQIVFESD--REGKEQLYVMQSN 334
           S  +SP+   +V       EG  ++ +   +
Sbjct: 617 SVRFSPNGKALVSVDGDIEEGNSRVIIWNFD 647



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 85/263 (32%), Gaps = 59/263 (22%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS     ++ + D+ G  IR L  S    +    FSPN + +A A  D      V L D 
Sbjct: 97  VSASEDGTVKLWDKRGQEIRTLEHS--GRVHSVSFSPNGETIAAAGEDK----TVKLWD- 149

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           R  R  + +      +    F  +G   LI+V ++  + ++  +        L       
Sbjct: 150 RSGRNIQTL-EHDGRVTNVDFFPDG-EMLITVSQNNTVKLW--NRDGQEIRTLEYDGAYI 205

Query: 305 ISASYSPDSSQIV-------------------------------FESD------REGKEQ 327
              S SP+   +                                F +D        G   
Sbjct: 206 RDVSISPNGETLAIAQGHEVMLLNKSGQLLTTFAAHFQNIESMGFSADGETLISAGGDGL 265

Query: 328 LYVMQSNGSDQKRI-----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           + +   NG     +     S+++  S  D  +SP G  I     +G    + +  K G +
Sbjct: 266 VKLWDRNGQQVLSLVGDLDSRERSDSILDASFSPNGQTIVAVSQNGT---VRLWDKRGQE 322

Query: 383 ERLLVEDSNLQAPTWSPSGRSLI 405
            + L     +    +SP G ++ 
Sbjct: 323 LQTLDGSGTV---RFSPDGETIA 342


>gi|88858551|ref|ZP_01133193.1| TolB domain protein [Pseudoalteromonas tunicata D2]
 gi|88820168|gb|EAR29981.1| TolB domain protein [Pseudoalteromonas tunicata D2]
          Length = 689

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 92/208 (44%), Gaps = 12/208 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISV 276
            + PN  K+ +A++++   L        +D   + +        + PR+ + G     + 
Sbjct: 362 SWHPNLAKLVFASHENGKRL-----GYEMDMKTRELTKLPVQGFSYPRYDAKGDIYYHNW 416

Query: 277 QKDEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           Q   A+    +D Q ++A   L  + +     ++S  ++++V  S+  G ++L++   +G
Sbjct: 417 QMGTAIMRIELDAQINSAPFPLLQSDYNFRYPNFSAAANKLVVVSNESGGDELWLASLDG 476

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA- 394
           +++ +++ +  A   DPVWS  G  I F   +  +  + ++     Q ++L         
Sbjct: 477 TNRTQLT-ELNAVVRDPVWSHDGRFIVFNAITLTENVLYLLDVATRQVQVLNTQFAFHYK 535

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +WS   +++  S   DG+   KL  +D
Sbjct: 536 ASWSLDDKAIFVS---DGNDVFKLTLVD 560



 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 101/277 (36%), Gaps = 17/277 (6%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQ-QKVAYAT 230
           ++R+L++ ++       N++  +D    +   LT   S          SP++   +   +
Sbjct: 273 DTRLLYIGKTETDDA--NAIYQLDLTTQHREKLTCVTSCHFDEEYVTLSPDELSMIVVRS 330

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                   V  + T   +  + +  +   I    +  N  + + +  ++     Y +D++
Sbjct: 331 LSTGQHQLV--LHTFSTQQEQVLLTWMHTIRGVSWHPNLAKLVFASHENGKRLGYEMDMK 388

Query: 291 SNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYV-MQSNGSDQKRISQDKEAS 348
           +    +L            Y      I + + + G   + + + +  +         + +
Sbjct: 389 TRELTKLPVQGFSY---PRYDAKGD-IYYHNWQMGTAIMRIELDAQINSAPFPLLQSDYN 444

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFS 407
           +  P +S   + +           + +   DG+    L E ++ ++ P WS  GR ++F+
Sbjct: 445 FRYPNFSAAANKLVVVSNESGGDELWLASLDGTNRTQLTELNAVVRDPVWSHDGRFIVFN 504

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWV 443
                 T + LY +D+  R   ++NT  A+     W 
Sbjct: 505 AIT--LTENVLYLLDVATRQVQVLNTQFAFHYKASWS 539



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 62/174 (35%), Gaps = 3/174 (1%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R LT    Q    PR+      + Y  +     +    +D +I+ AP  +         P
Sbjct: 390 RELTKLPVQGFSYPRYDAKGD-IYYHNWQMGTAIMRIELDAQINSAPFPLLQSDYNFRYP 448

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS+   + ++   +    +++   L      +LT    +     +S D   IVF +   
Sbjct: 449 NFSAAANKLVVVSNESGGDELWLASLDGTNRTQLTELNAVVRDPVWSHDGRFIVFNAITL 508

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            +  LY++        ++   + A ++   WS     I F     + F + ++ 
Sbjct: 509 TENVLYLLDVATRQV-QVLNTQFAFHYKASWSLDDKAI-FVSDGNDVFKLTLVD 560



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 54/291 (18%), Positives = 99/291 (34%), Gaps = 64/291 (21%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            + + +   P +S + Q + Y  Y  +   ++       D          S   A     
Sbjct: 214 TNSEFVESRPIWSSDNQTIYY--YRKKQKCQIIAQHLETDDVTVIGHCAASGGGALALFK 271

Query: 268 NGKRALIS--VQKDEAMDIYSVDLQSNATERLT-------NTLFINISA----------- 307
           +  R L     + D+A  IY +DL +   E+LT       +  ++ +S            
Sbjct: 272 DDTRLLYIGKTETDDANAIYQLDLTTQHREKLTCVTSCHFDEEYVTLSPDELSMIVVRSL 331

Query: 308 ------------------------------SYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                                         S+ P+ +++VF S   GK   Y M      
Sbjct: 332 STGQHQLVLHTFSTQQEQVLLTWMHTIRGVSWHPNLAKLVFASHENGKRLGYEMDM---K 388

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD----GSQERLLVEDSNLQ 393
            + +++     +  P +  +GD I +  +     AI  ++ D     +   LL  D N +
Sbjct: 389 TRELTKLPVQGFSYPRYDAKGD-IYYHNWQMGT-AIMRIELDAQINSAPFPLLQSDYNFR 446

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQWV 443
            P +S +   L+    + G  G +L+   L+G N T +    A   DP W 
Sbjct: 447 YPNFSAAANKLVVVSNESG--GDELWLASLDGTNRTQLTELNAVVRDPVWS 495



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 82/245 (33%), Gaps = 55/245 (22%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQ--SNATERLTNTLF 302
               P+ +  +    L P  S +G+  L S +K D   D+Y  DL   S   + +TN+ F
Sbjct: 159 TYGDPELLTQYPGRELFPAMSEDGRYLLFSWRKMDRDTDLYLKDLSQPSVPPKNITNSEF 218

Query: 303 INISASYSPDSSQIVF------------------------ESDREGK------------- 325
           +     +S D+  I +                         +   G              
Sbjct: 219 VESRPIWSSDNQTIYYYRKKQKCQIIAQHLETDDVTVIGHCAASGGGALALFKDDTRLLY 278

Query: 326 ---------EQLYVMQSNGSDQKRISQDKEASYFDP--VWSPQG-DLIAFTKFSGEKFAI 373
                      +Y +      +++++      + +     SP    +I     S  +  +
Sbjct: 279 IGKTETDDANAIYQLDLTTQHREKLTCVTSCHFDEEYVTLSPDELSMIVVRSLSTGQHQL 338

Query: 374 GVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +      QE++L+     ++  +W P+   L+F+  ++G      Y +D+  R  T + 
Sbjct: 339 VLHTFSTQQEQVLLTWMHTIRGVSWHPNLAKLVFASHENGKRLG--YEMDMKTRELTKLP 396

Query: 433 TPAYA 437
              ++
Sbjct: 397 VQGFS 401



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 51/158 (32%), Gaps = 7/158 (4%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGS 336
                 SV       E LT      +  + S D   ++F     DR+    L  +     
Sbjct: 149 GLFSRPSVAPTYGDPELLTQYPGRELFPAMSEDGRYLLFSWRKMDRDTDLYLKDLSQPSV 208

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQA 394
             K I+ + E     P+WS     I +     +K  I     +     ++     S   A
Sbjct: 209 PPKNIT-NSEFVESRPIWSSDNQTIYY-YRKKQKCQIIAQHLETDDVTVIGHCAASGGGA 266

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                    L++  K + D  + +Y +DL  ++   + 
Sbjct: 267 LALFKDDTRLLYIGKTETDDANAIYQLDLTTQHREKLT 304


>gi|289581394|ref|YP_003479860.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
 gi|289530947|gb|ADD05298.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
          Length = 762

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 8/116 (6%)

Query: 259 MILAPRFSSNGKRALISVQ-----KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +  P+ S  G+R     Q     +     I+ V +  +   +LT +  ++    +SPD 
Sbjct: 14  QVSDPQLSPGGERVAYVEQLPEDEESSEATIHVVPVGGDEPTQLTISEGVDSQPRWSPDG 73

Query: 314 SQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++ F S R   + ++QL+++ +    + R             WSP G  + FT+ 
Sbjct: 74  DRLAFASTRGEDDDRQQLWILPTTTGGEARQLTSVVGGVTGLEWSPDGSRLLFTQQ 129



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 214 LFEPRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           + +P+ SP  ++VAY      D+E       +       P ++     +   PR+S +G 
Sbjct: 15  VSDPQLSPGGERVAYVEQLPEDEESSEATIHVVPVGGDEPTQLTISEGVDSQPRWSPDGD 74

Query: 271 RALISVQK---DEAMDIYSVD-LQSNATERLTNTLFINISASYSPDSSQIVFE 319
           R   +  +   D+   ++ +         +LT+ +       +SPD S+++F 
Sbjct: 75  RLAFASTRGEDDDRQQLWILPTTTGGEARQLTSVVGGVTGLEWSPDGSRLLFT 127



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 47/323 (14%), Positives = 104/323 (32%), Gaps = 79/323 (24%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+ +V +         +   +   G +        + +  +PR+SP+  ++A+A+   ED
Sbjct: 26  RVAYVEQLPEDEESSEATIHVVPVGGDEPTQLTISEGVDSQPRWSPDGDRLAFASTRGED 85

Query: 236 ILR--VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
             R  ++++ T      +++ +    +    +S +G R L + Q                
Sbjct: 86  DDRQQLWILPTTTGGEARQLTSVVGGVTGLEWSPDGSRLLFTQQVTADDREEGRDLAVDP 145

Query: 278 ------------------------KDEAMDIYSVDL-----------------QSNATER 296
                                         +Y +D+                  ++A ER
Sbjct: 146 EYEPETPDPRVIDRMIYRAGTEYMDGRRSHVYVLDIEAALESDPSDPTDTDSEDTDAIER 205

Query: 297 LTNTLFINISASYSPDSSQI--------VFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           LT+    +I A++  D +            E+D   +  LY       +    +Q     
Sbjct: 206 LTDGDEDHIGATWGDDETVYYAVKTAEDAVEADDSSRYDLYEHDLETDEATAFTQTTGWV 265

Query: 349 YFDPVWSPQGDLIAFT-----KFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPS 400
                 +  G  IA+      + S  +  + V  ++   E       +       TW+P 
Sbjct: 266 TELEATT-DGR-IAYAFTPEEQASLRQTDVRVHDRETGAETTPTASLDRTIDGNFTWAPD 323

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL 423
              L F+   +G   + L+S+++
Sbjct: 324 EELLYFTTPDEG--ANVLWSVNV 344



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 11/118 (9%)

Query: 306 SASYSPDSSQIVFE-----SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               SP   ++ +       +   +  ++V+   G +  +++   E     P WSP GD 
Sbjct: 17  DPQLSPGGERVAYVEQLPEDEESSEATIHVVPVGGDEPTQLT-ISEGVDSQPRWSPDGDR 75

Query: 361 IAFTKFSGE---KFAIGVMK-KDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD 413
           +AF    GE   +  + ++    G + R L      +    WSP G  L+F+++   D
Sbjct: 76  LAFASTRGEDDDRQQLWILPTTTGGEARQLTSVVGGVTGLEWSPDGSRLLFTQQVTAD 133


>gi|145478263|ref|XP_001425154.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392222|emb|CAK57756.1| unnamed protein product [Paramecium tetraurelia]
          Length = 682

 Score = 83.5 bits (205), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 103/282 (36%), Gaps = 39/282 (13%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             RLWDVK  +Q    KF    +S   +    S D                     ++ S
Sbjct: 425 SIRLWDVKSGQQ--KAKFDGHLSSVLSV--NFSPD-------------------HTTLAS 461

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G +  S+ + D      +         +    FSP+   +A  + D+     + L DT+ 
Sbjct: 462 GSVDKSIRLWDVKTGYQKAKVDGHLSTVVSVNFSPDGTTLASGSSDN----SIRLWDTKT 517

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINI 305
            +   ++      + +  FS +G   L S   D ++ ++  D+++   + +L        
Sbjct: 518 GQQKVKLDGHSGYVNSVNFSLDGT-ILASGSFDNSIRLW--DVKTGQQKAKLDGHSETVT 574

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++SPDS+ +   S       + +       QK        + +   +SP G L+A   
Sbjct: 575 SVNFSPDSTILASGSH---DNSICIWDVKTGQQKAKLDGHSQTVYSVNFSPDGTLLASGS 631

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
           +      I +      Q+++ ++  +    +  +SP+G  L 
Sbjct: 632 WDK---LILLWDVKTGQQKVKLDGHSQTVYSVNFSPNGTLLA 670



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 96/304 (31%), Gaps = 28/304 (9%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQ---IIGKK---FFSSPASWRKIAHTISDDIYQSITGEK 170
                       RLWDVK  KQ    IG     +  + +   KI  ++   + Q      
Sbjct: 338 TTLASGSWDNSIRLWDVKTGKQKAIFIGHSGCVYSVNFSPEMKINLSVYGMLRQDNKKPN 397

Query: 171 GDFNSRILF------VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                 +L       +          NS+ + D      +         +    FSP+  
Sbjct: 398 QLVTQVMLIQSISLLMVLHQHLVSSDNSIRLWDVKSGQQKAKFDGHLSSVLSVNFSPDHT 457

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +A  + D      + L D +      ++    S +++  FS +G     S   D ++ +
Sbjct: 458 TLASGSVDK----SIRLWDVKTGYQKAKVDGHLSTVVSVNFSPDGTTLA-SGSSDNSIRL 512

Query: 285 YSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +  D ++   + +L        S ++S D + +   S       + +       QK    
Sbjct: 513 W--DTKTGQQKVKLDGHSGYVNSVNFSLDGTILASGSF---DNSIRLWDVKTGQQKAKLD 567

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSG 401
               +     +SP   ++A          I +      Q++  ++  +    +  +SP G
Sbjct: 568 GHSETVTSVNFSPDSTILASGSHDNS---ICIWDVKTGQQKAKLDGHSQTVYSVNFSPDG 624

Query: 402 RSLI 405
             L 
Sbjct: 625 TLLA 628



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/368 (13%), Positives = 112/368 (30%), Gaps = 81/368 (22%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                  +    RLWDVK  +Q                 H   D +        G     
Sbjct: 296 TILASGSVDKSIRLWDVKTGQQKAKLD-----------GHL--DYVNSVNFSCDG----- 337

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP--------------N 222
                 ++ SG   NS+ + D      + +       ++   FSP              +
Sbjct: 338 -----TTLASGSWDNSIRLWDVKTGKQKAIFIGHSGCVYSVNFSPEMKINLSVYGMLRQD 392

Query: 223 QQK-----------------VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            +K                 +    +       + L D +  +   +     S +L+  F
Sbjct: 393 NKKPNQLVTQVMLIQSISLLMVLHQHLVSSDNSIRLWDVKSGQQKAKFDGHLSSVLSVNF 452

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREG 324
           S +      S   D+++ ++  D+++   + ++   L   +S ++SPD + +   S    
Sbjct: 453 SPDHTTLA-SGSVDKSIRLW--DVKTGYQKAKVDGHLSTVVSVNFSPDGTTLASGSS--- 506

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +  +    QK              +S  G ++A   F      I +      Q++
Sbjct: 507 DNSIRLWDTKTGQQKVKLDGHSGYVNSVNFSLDGTILASGSFDNS---IRLWDVKTGQQK 563

Query: 385 LLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSID---------LNGRNETLINT 433
             ++  +    +  +SP    L       G   + +   D         L+G ++T+ + 
Sbjct: 564 AKLDGHSETVTSVNFSPDSTILA-----SGSHDNSICIWDVKTGQQKAKLDGHSQTVYSV 618

Query: 434 PAYASDPQ 441
             ++ D  
Sbjct: 619 N-FSPDGT 625



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 48/352 (13%), Positives = 101/352 (28%), Gaps = 79/352 (22%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             RLWDV+  KQ             +   H   D +        G           ++ S
Sbjct: 222 SIRLWDVQTGKQ-----------KVKIDGHR--DYVNSVCFSPNG----------TTLAS 258

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    ++ + D      + +       ++   FSP+   +A  + D      + L D + 
Sbjct: 259 GSDDQTIRLWDVKTGKQKAIFIGHSDFVYSVNFSPDSTILASGSVDK----SIRLWDVKT 314

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINI 305
            +   ++      + +  FS +G     S   D ++ ++  D+++   + +         
Sbjct: 315 GQQKAKLDGHLDYVNSVNFSCDGTTLA-SGSWDNSIRLW--DVKTGKQKAIFIGHSGCVY 371

Query: 306 SASYSP--------------DSSQI----------------------VFESDREGKEQLY 329
           S ++SP              D+ +                       +  SD      + 
Sbjct: 372 SVNFSPEMKINLSVYGMLRQDNKKPNQLVTQVMLIQSISLLMVLHQHLVSSDNS----IR 427

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +       QK       +S     +SP    +A          I +       ++  V+ 
Sbjct: 428 LWDVKSGQQKAKFDGHLSSVLSVNFSPDHTTLASGSVDKS---IRLWDVKTGYQKAKVDG 484

Query: 390 SNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                 +  +SP G +L        D   +L+      +   L     Y + 
Sbjct: 485 HLSTVVSVNFSPDGTTLA---SGSSDNSIRLWDTKTGQQKVKLDGHSGYVNS 533



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 69/197 (35%), Gaps = 16/197 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +    FSP+   +A  + D+     + L D +  +   +I   R  + +  F
Sbjct: 194 ILDGHSNQVNSICFSPDGTLLASGSCDN----SIRLWDVQTGKQKVKIDGHRDYVNSVCF 249

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREG 324
           S NG     S   D+ + ++  D+++   + +         S ++SPDS+ +   S    
Sbjct: 250 SPNGTTLA-SGSDDQTIRLW--DVKTGKQKAIFIGHSDFVYSVNFSPDSTILASGSV--- 303

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +       QK              +S  G  +A   +      I +      +++
Sbjct: 304 DKSIRLWDVKTGQQKAKLDGHLDYVNSVNFSCDGTTLASGSWDNS---IRLWDVKTGKQK 360

Query: 385 LLV--EDSNLQAPTWSP 399
            +       + +  +SP
Sbjct: 361 AIFIGHSGCVYSVNFSP 377



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 61/175 (34%), Gaps = 11/175 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   NS+ + D      +         +    FSPN   +A  + D      + L D +
Sbjct: 216 SGSCDNSIRLWDVQTGKQKVKIDGHRDYVNSVCFSPNGTTLASGSDDQ----TIRLWDVK 271

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
             +           + +  FS +    L S   D+++ ++  D+++   + +L   L   
Sbjct: 272 TGKQKAIFIGHSDFVYSVNFSPD-STILASGSVDKSIRLW--DVKTGQQKAKLDGHLDYV 328

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            S ++S D + +   S       + +       QK I        +   +SP+  
Sbjct: 329 NSVNFSCDGTTLASGS---WDNSIRLWDVKTGKQKAIFIGHSGCVYSVNFSPEMK 380


>gi|94971417|ref|YP_593465.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553467|gb|ABF43391.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 915

 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 67/184 (36%), Gaps = 18/184 (9%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              P  SS+G R     +KD    I+   L      ++           +SPD + + F 
Sbjct: 377 NGPPELSSDGTRVAFVARKDGQNSIWVRSLDKLEATQV-QGTAEGFRPFWSPDGTSLAFF 435

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +      +L+ +  NG     I+   E       W   G+ I F   +G    +  +   
Sbjct: 436 A----HAKLWRVDLNGVAPVAIADAPEG--RGGTWGA-GNTIVFAPNTGGP--LMEVDAA 486

Query: 380 GS------QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG--SKLYSIDLNGRNETLI 431
           G       +  + V+    + P + P G+  ++ R + G++   ++L    ++   +TLI
Sbjct: 487 GGAATPVTKMVVTVQGGTDRWPHFLPDGKHFLYLRVQTGNSSDHNELRVGSVDQSTDTLI 546

Query: 432 NTPA 435
               
Sbjct: 547 MHGG 550



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/285 (16%), Positives = 93/285 (32%), Gaps = 38/285 (13%)

Query: 192 SLCVMDRDGANIRYLTPS--------RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           SL     D  N +              D++ F   FS +QQ +        +    ++  
Sbjct: 568 SLLAWRFDPKNAKTSGEGIQIVGKLATDEVTFAGVFSVSQQGILLYQPGSSETGDRHVWT 627

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLF 302
               +   +I          R S +G R +          DI+  DL   A  RL+    
Sbjct: 628 DASGKPGAQISE-PGYYGPTRLSPDGTRVVTPVSSATGDSDIWMWDLLGGARARLSKGDV 686

Query: 303 INISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                ++S D+  I F +SD++G EQ+  + ++GS  +R     +        +  G  +
Sbjct: 687 FVDMPTWSADARTIYFGQSDKDGHEQIRAVPADGSAPERTLLKIDGDVLPVETTKDGRWL 746

Query: 362 AFTKFSGEKFA----IGVMKKDGSQERLLVEDSNLQAPTWS-----PSGR-SLIFSRKKD 411
            + +           +  +          V DS      +S     P     L +   + 
Sbjct: 747 LYEELIPGSLNNNEVLKALPLGSGDAPFTVLDS---VAAYSKASLKPESNDWLAYQSNES 803

Query: 412 GDTGSKL---------YSIDLNGRNETLINTPAYASDPQWVGFMD 447
           G +   L         Y +  +G  +     P ++ D + + ++D
Sbjct: 804 GHSEVYLTRFPHPGAKYQVSQSGATQ-----PLWSKDGKRLYYLD 843



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 41/118 (34%), Gaps = 6/118 (5%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Q  VM++N      +  +       P  S  G  +AF      + +I V   D  +   +
Sbjct: 355 QPRVMRTNLVAPNGMVFETLYRNGPPELSSDGTRVAFVARKDGQNSIWVRSLDKLEATQV 414

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              +    P WSP G SL F         +KL+ +DLNG     I          W  
Sbjct: 415 QGTAEGFRPFWSPDGTSLAFFAH------AKLWRVDLNGVAPVAIADAPEGRGGTWGA 466



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 58/151 (38%), Gaps = 17/151 (11%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           TL+ N     S D +++ F + ++G+  ++V   +  +  ++    E   F P WSP G 
Sbjct: 373 TLYRNGPPELSSDGTRVAFVARKDGQNSIWVRSLDKLEATQVQGTAEG--FRPFWSPDGT 430

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF   +     +  +  +G     + +    +  TW   G +++F+    G     L 
Sbjct: 431 SLAFFAHA----KLWRVDLNGVAPVAIADAPEGRGGTWGA-GNTIVFAPNTGGP----LM 481

Query: 420 SIDLNGRNETLIN------TPAYASDPQWVG 444
            +D  G   T +              P ++ 
Sbjct: 482 EVDAAGGAATPVTKMVVTVQGGTDRWPHFLP 512



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/327 (13%), Positives = 81/327 (24%), Gaps = 75/327 (22%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +R+ FV+        +NS+ V   D      +  + +   F P +SP+   +A+  +   
Sbjct: 387 TRVAFVARKDG----QNSIWVRSLDKLEATQVQGTAEG--FRPFWSPDGTSLAF--FAHA 438

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            + RV L                    A      G   + +        +  VD    A 
Sbjct: 439 KLWRVDLNGVAPVAIADAPEGRGGTWGA------GNTIVFAPNTGG--PLMEVDAAGGAA 490

Query: 295 ERLTN-----TLFINISASYSPDSSQIVFESDREGK----EQLYVMQSNGSDQKRISQDK 345
             +T          +    + PD    ++   + G      +L V   + S    I    
Sbjct: 491 TPVTKMVVTVQGGTDRWPHFLPDGKHFLYLRVQTGNSSDHNELRVGSVDQSTDTLIMHGG 550

Query: 346 EA-SYFDPVW---------------------SPQGDLIA--------------FTKFSG- 368
              + +   W                     S +G  I                    G 
Sbjct: 551 VYETRYVSGWLLVDRTGSLLAWRFDPKNAKTSGEGIQIVGKLATDEVTFAGVFSVSQQGI 610

Query: 369 ----------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                         +      G     + E         SP G  ++ +        S +
Sbjct: 611 LLYQPGSSETGDRHVWT-DASGKPGAQISEPGYYGPTRLSPDGTRVV-TPVSSATGDSDI 668

Query: 419 YSID-LNGRNETLINTPAYASDPQWVG 444
           +  D L G    L     +   P W  
Sbjct: 669 WMWDLLGGARARLSKGDVFVDMPTWSA 695



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 87/253 (34%), Gaps = 24/253 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V   V S    + + + D  G   R      D  +  P +S + + + +   D +   ++
Sbjct: 655 VVTPVSSATGDSDIWMWDLLGG-ARARLSKGDVFVDMPTWSADARTIYFGQSDKDGHEQI 713

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----VQKDEAMDIYSVDLQSN-AT 294
             +        + +      +L    + +G+  L         +    + ++ L S  A 
Sbjct: 714 RAVPADGSAPERTLLKIDGDVLPVETTKDGRWLLYEELIPGSLNNNEVLKALPLGSGDAP 773

Query: 295 ERLTNTLFINISASYSPDS-SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             + +++     AS  P+S   + ++S+  G  ++Y+ +      K   Q  ++    P+
Sbjct: 774 FTVLDSVAAYSKASLKPESNDWLAYQSNESGHSEVYLTRFPHPGAK--YQVSQSGATQPL 831

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           WS  G  + +      +  I V        +L  +   + AP         +F       
Sbjct: 832 WSKDGKRLYY--LDNSQHLISV------DIQLRGDSPQIGAP-------KTLFQTTIRDS 876

Query: 414 TGSKLYSIDLNGR 426
             +  Y +  +GR
Sbjct: 877 ITANGYDVTRDGR 889


>gi|127512833|ref|YP_001094030.1| peptidase S9 prolyl oligopeptidase [Shewanella loihica PV-4]
 gi|126638128|gb|ABO23771.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella loihica PV-4]
          Length = 685

 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 86/295 (29%), Gaps = 69/295 (23%)

Query: 214 LFEPRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           L     S +  K+ YA     D  +      + + ID   KR+ + +    +  FS++ K
Sbjct: 42  LHSSALSNDGTKIVYAVKKFDDKGEAQSDLYLQSLIDGKVKRLTSAKGTEHSVAFSADDK 101

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------------- 317
           +      +D +  +Y + L      +++N          S D +Q+V             
Sbjct: 102 KIYFLAARDGSSQLYELALDGGEAVKISNLPLDVEGFKLSQDGAQVVMNMRVYPECDTLQ 161

Query: 318 --------------------------------------FESDREGKEQLYVMQSNGSDQK 339
                                                 F +  +GK     +        
Sbjct: 162 CTADKREQEAERKSTGREYKQLMVRHWDTWGDHSRSHLFVAKLDGKMIDTAVDVTKGLDT 221

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSG-------EKFAIGVMKKDGSQERLLVEDSNL 392
                  +   +  ++P G  + ++  +          + +  +   G + + L E +  
Sbjct: 222 ETPPLPFSGMEEVTFTPDGKYVVYSAKAPSKSQAWETNYDLWQVSVLGGEAKNLTESNKA 281

Query: 393 QA--PTWSPSGRSLIFSRKKDGDTGSKLYSI----DLNGRNETLINTPAYASDPQ 441
               PT+S  GR L +         +  Y +     + G+ + +   P +   P 
Sbjct: 282 WDAQPTFSADGRYLAYLAMSKPGFEADRYRVMLRDTVTGQEKEV--APLWDRSPS 334



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 88/268 (32%), Gaps = 41/268 (15%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +E   +G     L V   D                   +  + +   +    D  ++   
Sbjct: 171 AERKSTGREYKQLMVRHWD------------------TWGDHSRSHLFVAKLDGKMIDTA 212

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------DEAMDIYSVDLQSNA 293
           +  T+          F  M     F+ +GK  + S +        +   D++ V +    
Sbjct: 213 VDVTKGLDTETPPLPFSGME-EVTFTPDGKYVVYSAKAPSKSQAWETNYDLWQVSVLGGE 271

Query: 294 TERLT-NTLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQD 344
            + LT +    +   ++S D   +         FE+DR    ++ +  +    +K ++  
Sbjct: 272 AKNLTESNKAWDAQPTFSADGRYLAYLAMSKPGFEADR---YRVMLRDTVTGQEKEVAPL 328

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S     +      +  T     + +I  +       + L  D +      +  G  +
Sbjct: 329 WDRSPSSLTFGADNRTLYVTAQDLGQVSIFEVNTQFGDVKTLHNDGSNSILGVT--GDKI 386

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +F+ K   + G  LY++ L+G+N   + 
Sbjct: 387 VFNHKSLVEPG-DLYTMSLDGQNVNRLT 413



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 75/244 (30%), Gaps = 32/244 (13%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-SRDQILFEP----------RF 219
           G    +++           ++ L V   DG  I      ++      P           F
Sbjct: 177 GREYKQLMVRHWDTWGDHSRSHLFVAKLDGKMIDTAVDVTKGLDTETPPLPFSGMEEVTF 236

Query: 220 SPNQQKVAYATYDDEDI------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +P+ + V Y+               ++ +      A     + ++    P FS++G+   
Sbjct: 237 TPDGKYVVYSAKAPSKSQAWETNYDLWQVSVLGGEAKNLTESNKAWDAQPTFSADGRYLA 296

Query: 274 I-SVQKDE----AMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGK 325
             ++ K         +   D  +   + +      + S S   +  D+  +   +   G+
Sbjct: 297 YLAMSKPGFEADRYRVMLRDTVTGQEKEV--APLWDRSPSSLTFGADNRTLYVTAQDLGQ 354

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQER 384
             ++ + +   D K +  D   S         GD I F   S  E   +  M  DG    
Sbjct: 355 VSIFEVNTQFGDVKTLHNDGSNSILGVT----GDKIVFNHKSLVEPGDLYTMSLDGQNVN 410

Query: 385 LLVE 388
            L E
Sbjct: 411 RLTE 414



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 10/191 (5%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G +            +      L  +   G   + LT S      +P FS + 
Sbjct: 233 EVTFTPDGKYVVYSAKAPSKSQAWETNYDLWQVSVLGGEAKNLTESNKAWDAQPTFSADG 292

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D  RV L DT   +  +    +     +  F ++ +   ++ Q  
Sbjct: 293 RYLAYLAMSKPGFEADRYRVMLRDTVTGQEKEVAPLWDRSPSSLTFGADNRTLYVTAQDL 352

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSD 337
             + I+ V+ Q    + L N    +I         +IVF   S  E    LY M  +G +
Sbjct: 353 GQVSIFEVNTQFGDVKTLHNDGSNSILGV---TGDKIVFNHKSLVE-PGDLYTMSLDGQN 408

Query: 338 QKRISQDKEAS 348
             R+++  + +
Sbjct: 409 VNRLTEVNKDN 419


>gi|309790238|ref|ZP_07684808.1| WD-40 repeat-containing protein [Oscillochloris trichoides DG6]
 gi|308227702|gb|EFO81360.1| WD-40 repeat-containing protein [Oscillochloris trichoides DG6]
          Length = 635

 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 87/231 (37%), Gaps = 22/231 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++ +   DG  +  +       ++   + P+ Q +A    D     ++ L       +  
Sbjct: 425 TVYLWAADGTPMSEIHCPERAKVYSLAWRPDGQMLAVGYDDH----QIRLWQMAEQLSVF 480

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +      + +  +S +G+    S   D ++ ++ +       + L          ++ P
Sbjct: 481 SLQGHTGCVYSLAWSPDGQSLA-SASADSSLRLWRL-ANGRLVDELRRHKNWAAKLAWHP 538

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D S         G+EQ ++ + + +    I        +   WSP G ++A     G   
Sbjct: 539 DGS---------GEEQPWLWRVSDTSLCLIVTGHRNYVYCVAWSPDGQVLASC---GADS 586

Query: 372 AIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + + + DGS   LL+  S+  QA  WSP G SL  +     D   +L+S+
Sbjct: 587 TLRLWRNDGSPISLLMGHSDWVQAVAWSPDGNSLASASL---DGSVQLWSM 634



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 86/254 (33%), Gaps = 20/254 (7%)

Query: 152 RKIAH---TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           R   H    +SD I ++++    D         +  + G  +  +      GA +R    
Sbjct: 263 RLNGHVSRHVSDAIMRAMSRLPLDRYPN-AEAFKRDLLGKTQRYIR-----GAQMRERLV 316

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            +   ++   + P    +A       +   V+L           +   +S + A  +  +
Sbjct: 317 DQGLFIYTLAWHPGGHILA----SSGEDRMVHLWRPHDGAPLGSLRGHQSKVQALAWHPD 372

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +  L S   D  + ++      +    +T         ++SPD   +         + +
Sbjct: 373 -EDLLASASADRTIRLWR-STDLSCVTTITGHREPVTCLAWSPDGEVLA----SGSGDTV 426

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y+  ++G+    I   + A  +   W P G ++A   +   +  +  M +  S   L   
Sbjct: 427 YLWAADGTPMSEIHCPERAKVYSLAWRPDGQMLA-VGYDDHQIRLWQMAEQLSVFSLQGH 485

Query: 389 DSNLQAPTWSPSGR 402
              + +  WSP G+
Sbjct: 486 TGCVYSLAWSPDGQ 499


>gi|333027173|ref|ZP_08455237.1| putative protease [Streptomyces sp. Tu6071]
 gi|332747025|gb|EGJ77466.1| putative protease [Streptomyces sp. Tu6071]
          Length = 1077

 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 69/192 (35%), Gaps = 21/192 (10%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+    + + D    ++   L      R++           SPD + + + S REG  ++
Sbjct: 17  GEFIAFTAEDD----VWIAPLDGGRAWRVSADNVPVQHPRISPDGATVAWTSKREGAPEV 72

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL 385
           +V    G   +R++           W+ +GD++A T              +  DGS  R 
Sbjct: 73  FVAPLEGGPARRLTYWGSNKTSVRGWTAEGDVVAITSHGQPSLRRTWAHALPLDGSASRR 132

Query: 386 LVE---DSNLQAP--------TWSPSGRSLIFSRKKDGDTGSKLYS-IDLNGRNETL-IN 432
           L      +    P        + S  GR   + ++  G T  KL+   D  G  + +  +
Sbjct: 133 LPYGPIGALAHEPEGERVLLGSVS-MGREAAWWKRYRGGTAGKLWLGPDAEGAWQRVHAD 191

Query: 433 TPAYASDPQWVG 444
                 DP WVG
Sbjct: 192 LDGNIEDPLWVG 203



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 95/261 (36%), Gaps = 33/261 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +   DG    +   + +  +  PR SP+   VA+ +   E    V++         +
Sbjct: 27  DVWIAPLDGGRA-WRVSADNVPVQHPRISPDGATVAWTS-KREGAPEVFVAPLE-GGPAR 83

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTNTLFINISA 307
           R+  + S   + R +++ G    I+            +++ L  +A+ RL       ++ 
Sbjct: 84  RLTYWGSNKTSVRGWTAEGDVVAITSHGQPSLRRTWAHALPLDGSASRRLPYGPIGALAH 143

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-------------KRISQDKEASYFDPVW 354
              P+  +++  S   G+E  +  +  G                +R+  D + +  DP+W
Sbjct: 144 E--PEGERVLLGSVSMGREAAWWKRYRGGTAGKLWLGPDAEGAWQRVHADLDGNIEDPLW 201

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDG 412
              G  IAF        A+     DGS  R    VE     A   +  G  ++++     
Sbjct: 202 V--GGRIAFLSDHEGVGALYSSLPDGSDLRRHSPVEPDGFYARQAATDGTRVVWAS---- 255

Query: 413 DTGSKLYSI-DLNGRNETLIN 432
               +L+ I DL G     ++
Sbjct: 256 --AGRLWIIDDLEGAEPRPLD 274



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 81/229 (35%), Gaps = 36/229 (15%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A+   DD     V++      RA  R+      +  PR S +G     + +++ A 
Sbjct: 17  GEFIAFTAEDD-----VWIAPLDGGRAW-RVSADNVPVQHPRISPDGATVAWTSKREGAP 70

Query: 283 DIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYV-----MQSNGS 336
           +++   L+     RLT       S   ++ +   +   S   G+  L       +  +GS
Sbjct: 71  EVFVAPLEGGPARRLTYWGSNKTSVRGWTAEGDVVAITSH--GQPSLRRTWAHALPLDGS 128

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTK-------------FSGEKFAIGV-MKKDGSQ 382
             +R+      +       P+G+ +                   G    + +    +G+ 
Sbjct: 129 ASRRLPYGPIGALAHE---PEGERVLLGSVSMGREAAWWKRYRGGTAGKLWLGPDAEGAW 185

Query: 383 ERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +R+  + D N++ P W   G  + F    +G     LYS   +G +   
Sbjct: 186 QRVHADLDGNIEDPLWV--GGRIAFLSDHEG--VGALYSSLPDGSDLRR 230



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 95/295 (32%), Gaps = 27/295 (9%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRY--LTPSRDQILFEPRFSPNQQK 225
           E   F +R      + V       L ++D  +GA  R   +     +   +P   P  + 
Sbjct: 235 EPDGFYARQAATDGTRVVWASAGRLWIIDDLEGAEPRPLDIGLGGQRADLQPFAIPASRW 294

Query: 226 VAYATYDDEDILRVYL------MDTRIDRAPKRIGNFRSM-ILAPR-FSSNGK-RALISV 276
           ++ A  D        L        T  D   + +   + +    PR F  +G+       
Sbjct: 295 LSAARPDHTGRGSAVLVRGAVHWVTHRDGPARVLAGEQGVRARLPRTFRLDGEEWVAWVT 354

Query: 277 QKDEAMDIYSVDLQSNAT----ERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVM 331
             +    I        A      R+        +S + +PD  ++   S      ++ ++
Sbjct: 355 DAEGEDAIEFAPATGTAPGTAPRRIARGKLGRVLSFAVAPDGERLGVASH---DGRVLLV 411

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAIGVMKKDGSQERLLVE 388
           + +  + + + + +       V+SP    +A++    +   +  +  +  D +       
Sbjct: 412 ERSSGEVREVDRSENGDASGLVFSPDSTWLAWSHPGPDPLRQLKLAHVS-DLAPVEATPL 470

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLINTPAYASDP 440
                +P ++P G+ L F   +  D     ++ DL         LI   A    P
Sbjct: 471 RFKDYSPAFTPDGKHLAFLSDRAFDPLYDAHNFDLAFIGTTRPHLITLAATTPSP 525


>gi|332707423|ref|ZP_08427472.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332353774|gb|EGJ33265.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1143

 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 88/239 (36%), Gaps = 26/239 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              + +       +    FSP+ + +A A+ D  + +RV+ +          +   +  +
Sbjct: 238 FREKRIFRGHQDWVRSVSFSPDGKTLATASAD--NTVRVWDLQ---GNQLALLKGHQGSV 292

Query: 261 LAPRFSSNGKRAL-------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +  FS +GK          ++  K E   +   DLQ N    L        S S+SPD 
Sbjct: 293 RSVSFSPDGKMLATASDSTMLTEDKTEDTTVRVWDLQGNPLAVLRGHEGWVRSVSFSPDG 352

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +   SD+     + V    G +Q  + +          +S  G  +A   F      I
Sbjct: 353 KTLATASDKT----VRVWDLEG-NQLALLKGHRFWVNSVSFSRDGKTLATASFDNT---I 404

Query: 374 GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +    G+   +L     ++ + +++ +G+ L  +     D+  +L+  DL G    ++
Sbjct: 405 ILWDLQGNPLVMLRGHQDSVNSLSFNRNGKRLATASS---DSTIRLW--DLQGNPLAVL 458



 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/300 (17%), Positives = 112/300 (37%), Gaps = 34/300 (11%)

Query: 129 RLWDVKDRKQIIGKKFFSSPAS--WRKIAHTISDDIYQS--------------ITGEKGD 172
           RLWD++  + ++ K +  S  S  + +   T++   Y                + G +G 
Sbjct: 574 RLWDLQGNRLVLLKGYRRSVNSVSFSRDGKTLATVSYDKTVRLWDLQGKQLALLKGHQGS 633

Query: 173 FNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
             S       +++ +     ++ + D  G N   +       +   RFS + Q +A A+ 
Sbjct: 634 IESVSFSRDGKTLATASEDKTVRLWDLQG-NPLAVLRGHQNSVISVRFSRDGQMLATASE 692

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D      V L D +       +   +  + +  FS +GK    +   D+ + ++  DLQ 
Sbjct: 693 DK----TVRLWDLQ-GNPLAVLRGHQPSVKSISFSRDGKTLA-TASYDKTVRLW--DLQG 744

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           N    L        S S+S D   +   S+    + + +    G +   + +  + S   
Sbjct: 745 NQLALLKGHEGSVNSVSFSRDGKTLATASE---DKTVRLWDLQG-NPLAVLRGHQNSVIS 800

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKK 410
             +S  G ++A          + +    G+   +L     ++++ ++SP G+ L  +  +
Sbjct: 801 VRFSRDGQMLATASEDKT---VRLWDLQGNPLAVLRGHQPSVKSVSFSPDGKMLATTSGR 857



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 100/272 (36%), Gaps = 27/272 (9%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           + G +G   S         ++     ++ V D +G N   L       +    FS + + 
Sbjct: 336 LRGHEGWVRSVSFSPDGKTLATASDKTVRVWDLEG-NQLALLKGHRFWVNSVSFSRDGKT 394

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A A++D+     + L D + +      G+  S+     F+ NGKR   +   D  + ++
Sbjct: 395 LATASFDN----TIILWDLQGNPLVMLRGHQDSVNSL-SFNRNGKRLA-TASSDSTIRLW 448

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             DLQ N    L        S S+SPD   +   S     ++   + ++  +Q  + Q  
Sbjct: 449 --DLQGNPLAVLRGHQGSVNSLSFSPDGKTLATAS----SDRTVRLWNSKGNQLALFQGY 502

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNLQAPTWSP 399
             S     +SP G  +A     G    +      G+        +  V   ++ + ++S 
Sbjct: 503 RRSVNSVSFSPDGKALAMALSDGT---VRFWDLQGNRLGLSQGYQDRVNRRSVISISFSS 559

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             + L     +  D   +L+  DL G    L+
Sbjct: 560 DAKMLA---TESDDHTVRLW--DLQGNRLVLL 586



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 70/227 (30%), Gaps = 31/227 (13%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L      G  +  +      +   P  SP               +          R 
Sbjct: 196 RELLYSAMETGQQLFNIVKDGRPLDNYPAISP---------------IYALQQSLSKFRE 240

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +     +  + +  FS +GK    +   D  + ++  DLQ N    L        S S+
Sbjct: 241 KRIFRGHQDWVRSVSFSPDGKTLA-TASADNTVRVW--DLQGNQLALLKGHQGSVRSVSF 297

Query: 310 SPDSSQIVFESDR-------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           SPD   +   SD             + V    G +   + +  E       +SP G  +A
Sbjct: 298 SPDGKMLATASDSTMLTEDKTEDTTVRVWDLQG-NPLAVLRGHEGWVRSVSFSPDGKTLA 356

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
                     + V   +G+Q  LL      + + ++S  G++L  + 
Sbjct: 357 TASDK----TVRVWDLEGNQLALLKGHRFWVNSVSFSRDGKTLATAS 399


>gi|323345691|ref|ZP_08085914.1| prolyl oligopeptidase [Prevotella oralis ATCC 33269]
 gi|323093805|gb|EFZ36383.1| prolyl oligopeptidase [Prevotella oralis ATCC 33269]
          Length = 722

 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 84/241 (34%), Gaps = 63/241 (26%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S +GK+ +  V      +      +Y  D      ++LT +      A++  
Sbjct: 49  GRISGVSASPDGKKIVYQVGYYSVKENKGHQILYVSDADGKNKKQLTTSAENETDAAWIG 108

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--------- 362
           + S+I F   R+G  QL+ M ++GS +K+++ + +       +SP G  +          
Sbjct: 109 NGSKIAFL--RDG--QLWSMNADGSSRKQLT-NSKTDIEGFKFSPDGKHVILIKSIPYHG 163

Query: 363 ---------------------------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                                      + +     F   V +   S  + ++     + P
Sbjct: 164 TIKANPNDLPLATGRLVTDMNYRHWDHYVETIAHPFVAEVTENGISDGKDILNGEPYECP 223

Query: 396 T----------WSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTPAYASD 439
                      WSP  + + ++ RKK+G      T S +Y  +++ +    +  PA   +
Sbjct: 224 MAPFGGIEQLCWSPDSKYIAYTCRKKEGVGYAISTDSDIYLYNIDTQETRNLCKPAGYKE 283

Query: 440 P 440
           P
Sbjct: 284 P 284



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 78/278 (28%), Gaps = 89/278 (32%)

Query: 220 SPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ +K+ Y     +  +    ++  +     +  K++           +  NG +    
Sbjct: 57  SPDGKKIVYQVGYYSVKENKGHQILYVSDADGKNKKQLTTSAENETDAAWIGNGSKIAF- 115

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN- 334
             +D    ++S++   ++ ++LTN+        +SPD   ++          +    ++ 
Sbjct: 116 -LRDG--QLWSMNADGSSRKQLTNSKTDIEGFKFSPDGKHVILIKSIPYHGTIKANPNDL 172

Query: 335 GSDQKRISQDKEASYFDPV----------------------------------------- 353
                R+  D    ++D                                           
Sbjct: 173 PLATGRLVTDMNYRHWDHYVETIAHPFVAEVTENGISDGKDILNGEPYECPMAPFGGIEQ 232

Query: 354 --WSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVED-------------- 389
             WSP    IA+T    E           I +   D  + R L +               
Sbjct: 233 LCWSPDSKYIAYTCRKKEGVGYAISTDSDIYLYNIDTQETRNLCKPAGYKEPNIDATKSM 292

Query: 390 --------------SNLQAPTWSPSGRSLIF-SRKKDG 412
                              P++SP G+ + + S  +DG
Sbjct: 293 KDQAVNRQDGDFSVGYDINPSFSPDGKYIAWQSMARDG 330



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 104/336 (30%), Gaps = 95/336 (28%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        L V D DG N + LT S +    +  +  N  K+A+             
Sbjct: 70  YSVKENKGHQILYVSDADGKNKKQLTTSAEN-ETDAAWIGNGSKIAFLRDGQ------LW 122

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI----YSVDLQSNATER- 296
                  + K++ N ++ I   +FS +GK  ++         I      + L +      
Sbjct: 123 SMNADGSSRKQLTNSKTDIEGFKFSPDGKHVILIKSIPYHGTIKANPNDLPLATGRLVTD 182

Query: 297 -------------------------LTNTLFI-NISA--------------SYSPDSSQI 316
                                    +++   I N                  +SPDS  I
Sbjct: 183 MNYRHWDHYVETIAHPFVAEVTENGISDGKDILNGEPYECPMAPFGGIEQLCWSPDSKYI 242

Query: 317 VFE-SDREG-------KEQLYVMQSNGSDQKRI-----------------------SQDK 345
            +    +EG          +Y+   +  + + +                        QD 
Sbjct: 243 AYTCRKKEGVGYAISTDSDIYLYNIDTQETRNLCKPAGYKEPNIDATKSMKDQAVNRQDG 302

Query: 346 E---ASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAP 395
           +       +P +SP G  IA+   + + +      + +     + ++ + E  DSN+ A 
Sbjct: 303 DFSVGYDINPSFSPDGKYIAWQSMARDGYESDRNRLCIFSLADASKKYITEKFDSNVDAY 362

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           TW+   R+L F+          +Y  +L G  + + 
Sbjct: 363 TWANDSRTLYFTGC--WHATVNIYQTNLAGEVKQMT 396



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/287 (16%), Positives = 88/287 (30%), Gaps = 85/287 (29%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI------------ 236
               L  M+ DG++ + LT S+  I    +FSP+ + V                      
Sbjct: 117 RDGQLWSMNADGSSRKQLTNSKTDIEGF-KFSPDGKHVILIKSIPYHGTIKANPNDLPLA 175

Query: 237 ---------LRVYLMDTRIDRAP-------------KRIGNFRSMI--LAP-------RF 265
                     R +         P             K I N       +AP        +
Sbjct: 176 TGRLVTDMNYRHWDHYVETIAHPFVAEVTENGISDGKDILNGEPYECPMAPFGGIEQLCW 235

Query: 266 SSNGKRALISVQKDEA--------MDIYSVDLQSNATERL-------------TNTL--- 301
           S + K    + +K E          DIY  ++ +  T  L             T ++   
Sbjct: 236 SPDSKYIAYTCRKKEGVGYAISTDSDIYLYNIDTQETRNLCKPAGYKEPNIDATKSMKDQ 295

Query: 302 -----------FINISASYSPDSSQIVFESD-REG----KEQLYVMQSNGSDQKRISQDK 345
                        +I+ S+SPD   I ++S  R+G    + +L +     + +K I++  
Sbjct: 296 AVNRQDGDFSVGYDINPSFSPDGKYIAWQSMARDGYESDRNRLCIFSLADASKKYITEKF 355

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +++     W+     + FT        I      G + + + E  N 
Sbjct: 356 DSNVDAYTWANDSRTLYFTGCWHATVNIYQTNLAG-EVKQMTEGWND 401


>gi|58583948|ref|YP_202964.1| dipeptidyl peptidase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|58428542|gb|AAW77579.1| dipeptidyl peptidase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 812

 Score = 83.1 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 17/214 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATE---RLT 298
            + +RA +   N      A  +S +G+   + ++  +  D +   VDL +   +   RL+
Sbjct: 345 LKGNRAVRVESNGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDLDNAKLQPRHRLS 404

Query: 299 NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++ +IN   +   + PD+  +   S+  G  QLY M+ N   ++R     +     PV S
Sbjct: 405 DSAWINWDFNDFGWLPDNRTLWLLSEESGYSQLYTMEGNSKPRQR--TRGKWEVSMPVPS 462

Query: 356 PQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  + F         + +  +     Q   +   + ++  + SP+G+ L+        
Sbjct: 463 ADGSGMFFLCNQKWPGDYEVCKLDLRNDQLTEVTALNGVEGFSLSPNGQQLL-VSYSGSY 521

Query: 414 TGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
             ++L  +   G   T++    TPA+ + P W+ 
Sbjct: 522 LPTQLAVVPATGGQATVLTDTRTPAFKAQP-WIA 554



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 16/142 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--S 258
           A+  ++ PS DQ      +  + ++V Y        +R     +      +R+ +     
Sbjct: 54  ADPDWIGPSVDQA----WWQWDGKQVQYLLKRAGSPVRDTYRQSTAGGTAERVADTARAG 109

Query: 259 MILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +  A P + +  +R L +   D    I+  DL+S A  +LT +  I     ++ D   I 
Sbjct: 110 LDAANPSYDATRQRMLFARNGD----IFLRDLRSGALTQLTRSNEIESRPQFASDGGAIW 165

Query: 318 FESDREGKEQLYVMQSNGSDQK 339
               R G    Y  +++G   +
Sbjct: 166 ----RAGNN-WYHWRADGGTAQ 182



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 78/251 (31%), Gaps = 33/251 (13%)

Query: 130 LWDVKDRKQIIGKKFFSSP---------ASWRKIAHTISDDIYQSITGEK-GDFNSRILF 179
           L DV        K     P         A+ RK A   +    +++  E  GD +   + 
Sbjct: 309 LVDVSAG---TAKSLSFDPLPGIATDPLAALRKAAKRDALKGNRAVRVESNGDGSGPAVH 365

Query: 180 VSESVVS------GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-------PNQQKV 226
            S+   +       +      +   D  N +     R        +        P+ + +
Sbjct: 366 WSDDGRNVAVEIRAVDNKDRWIASVDLDNAKLQPRHRLSDSAWINWDFNDFGWLPDNRTL 425

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDI 284
              + +        L     +  P++    +  +  P  S++G        +      ++
Sbjct: 426 WLLSEESG---YSQLYTMEGNSKPRQRTRGKWEVSMPVPSADGSGMFFLCNQKWPGDYEV 482

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQ 343
             +DL+++    +T    +    S SP+  Q++          QL V+ + G     ++ 
Sbjct: 483 CKLDLRNDQLTEVTALNGVEGF-SLSPNGQQLLVSYSGSYLPTQLAVVPATGGQATVLTD 541

Query: 344 DKEASYFDPVW 354
            +  ++    W
Sbjct: 542 TRTPAFKAQPW 552


>gi|320162537|ref|YP_004175762.1| hypothetical protein ANT_31360 [Anaerolinea thermophila UNI-1]
 gi|319996391|dbj|BAJ65162.1| hypothetical protein ANT_31360 [Anaerolinea thermophila UNI-1]
          Length = 144

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 55/138 (39%), Gaps = 11/138 (7%)

Query: 265 FSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           +S +G+    +    +     IY +    +   +L +         +SPD SQI F S+ 
Sbjct: 6   WSPDGEEIAFTYNAGDGQGTSIYLIRPDGSGLRKLASRAA---EPVWSPDGSQIYFFSNL 62

Query: 323 EGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFSGE----KFAIGVM 376
            G+ +++ ++ +GS  +++S    +         SP G  +AF     E       I V+
Sbjct: 63  TGQVEIWRIRRDGSGLQQVSSLYPQVNVDHSLRISPDGAQLAFYGVGPEVAEYGTEIYVL 122

Query: 377 KKDGSQERLLVEDSNLQA 394
             DGS  R +      + 
Sbjct: 123 NVDGSNLRSITLSRGQEE 140



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 59/132 (44%), Gaps = 12/132 (9%)

Query: 309 YSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +SPD  +I F  +    +   +Y+++ +GS  ++++        +PVWSP G  I F   
Sbjct: 6   WSPDGEEIAFTYNAGDGQGTSIYLIRPDGSGLRKLASR----AAEPVWSPDGSQIYFFSN 61

Query: 367 SGEKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPSGRSLIFSRKKD--GDTGSKLYS 420
              +  I  +++DGS  + +           +   SP G  L F        + G+++Y 
Sbjct: 62  LTGQVEIWRIRRDGSGLQQVSSLYPQVNVDHSLRISPDGAQLAFYGVGPEVAEYGTEIYV 121

Query: 421 IDLNGRNETLIN 432
           ++++G N   I 
Sbjct: 122 LNVDGSNLRSIT 133



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 56/132 (42%), Gaps = 12/132 (9%)

Query: 219 FSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +SP+ +++A+     D     +YL+        K      S    P +S +G +      
Sbjct: 6   WSPDGEEIAFTYNAGDGQGTSIYLIRPDGSGLRKL----ASRAAEPVWSPDGSQIYFFSN 61

Query: 278 KDEAMDIYSVDLQSNATERLTNTL---FINISASYSPDSSQIVFES----DREGKEQLYV 330
               ++I+ +    +  +++++      ++ S   SPD +Q+ F        E   ++YV
Sbjct: 62  LTGQVEIWRIRRDGSGLQQVSSLYPQVNVDHSLRISPDGAQLAFYGVGPEVAEYGTEIYV 121

Query: 331 MQSNGSDQKRIS 342
           +  +GS+ + I+
Sbjct: 122 LNVDGSNLRSIT 133



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 351 DPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
              WSP G+ IAFT  +G+    +I +++ DGS  R L   S    P WSP G  + F  
Sbjct: 3   WQQWSPDGEEIAFTYNAGDGQGTSIYLIRPDGSGLRKLA--SRAAEPVWSPDGSQIYFFS 60

Query: 409 KKDGDTGSKLYSIDLNGRNETLINT 433
              G    +++ I  +G     +++
Sbjct: 61  NLTGQV--EIWRIRRDGSGLQQVSS 83



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 45/125 (36%), Gaps = 11/125 (8%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                   S+ ++  DG+ +R L         EP +SP+  ++ + +      + ++ + 
Sbjct: 18  NAGDGQGTSIYLIRPDGSGLRKLASR----AAEPVWSPDGSQIYFFSNLTGQ-VEIWRIR 72

Query: 244 TRIDRAPKRIGNFRSMIL--APRFSSNGKRALISVQKDE----AMDIYSVDLQSNATERL 297
                  +    +  + +  + R S +G +        E      +IY +++  +    +
Sbjct: 73  RDGSGLQQVSSLYPQVNVDHSLRISPDGAQLAFYGVGPEVAEYGTEIYVLNVDGSNLRSI 132

Query: 298 TNTLF 302
           T +  
Sbjct: 133 TLSRG 137



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           WSP G  + F+       G+ +Y I  +G     + +   A++P W  
Sbjct: 6   WSPDGEEIAFTYNAGDGQGTSIYLIRPDGSGLRKLAS--RAAEPVWSP 51


>gi|220918692|ref|YP_002493996.1| serine/threonine protein kinase with WD40 repeats [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956546|gb|ACL66930.1| serine/threonine protein kinase with WD40 repeats [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 1072

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 59/373 (15%), Positives = 129/373 (34%), Gaps = 42/373 (11%)

Query: 77  DVFNLI--SQDSFKQKITNPDSIPRFQDWN------SLGAQVLVT------GRVIKE-GK 121
               +I     +       P  +     W+      ++G++  V       GRV +  G 
Sbjct: 553 GFVRVIASPGGAVLATAPLPGGVVWSVAWSPDGRLVAVGSEDGVVRLLGPDGRVRQSLGA 612

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
             L V    +D    + + G +   +   WR  A     ++   + G +G          
Sbjct: 613 PGLAVSSVAFDRAGTRVVAGSQ-DGAARVWRLGA--AVPEV--RLRGHRGSVAYAAFAPD 667

Query: 182 -ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
              VV+G  + ++ +   DG     +      +   P   P+  ++    +       + 
Sbjct: 668 GRRVVTGGTEGTVRIWPADGEGSPVVLRGHTVVDGAPT--PDGSRL----FTRGTDDVIR 721

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +  T   R   ++    +++   +++ +G R L +   D    ++   +   A   + + 
Sbjct: 722 VWRTDDPRQRGQLVGHEALVDTVQWTRDGTRVL-TASHDGTARLW--PVHGGAALTVRDP 778

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             +  SA   P     V  S+      + V  +      R  +  +       +SP G L
Sbjct: 779 GNVIHSADLDPTERTFVTSSE---DRTVRVWDAATGALVRELRGHDGPVLSAAFSPDGTL 835

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           IA          + V + DG+   L+     + L A TW+P G+++I S + +    + +
Sbjct: 836 IASGSLDKT---VRVWRADGTGTPLVFRGHGAVLTAVTWTPDGKAVISSSQDE----ASV 888

Query: 419 YSIDLNGRNETLI 431
           +   L+G    ++
Sbjct: 889 HVWPLDGSPPRVV 901



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/312 (16%), Positives = 102/312 (32%), Gaps = 30/312 (9%)

Query: 118  KEGKDRLRVEFRLWDVK----DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
               + +L     L D      D  +++      +   W    H  +    +         
Sbjct: 728  PRQRGQLVGHEALVDTVQWTRDGTRVLTASHDGTARLWP--VHGGAALTVR---DPGNVI 782

Query: 174  NSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            +S  L  +E   V+     ++ V D     +       D  +    FSP+   +A  + D
Sbjct: 783  HSADLDPTERTFVTSSEDRTVRVWDAATGALVRELRGHDGPVLSAAFSPDGTLIASGSLD 842

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                  V +        P       +++ A  ++ +GK  + S Q + ++ ++ +D    
Sbjct: 843  K----TVRVWRADGTGTPLVFRGHGAVLTAVTWTPDGKAVISSSQDEASVHVWPLD---G 895

Query: 293  ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +  R+         A+ +PD + +V     E    L     +G ++       E   F  
Sbjct: 896  SPPRVVRAGRPVFRAAVAPDGTLLV----PEQGGALRRFSPDGEERAPFPALPEG-LFSV 950

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              S  G   A     G    + V  +DGS     L   D  +    +SP G  L      
Sbjct: 951  AVSRDGRRWALASSDGT---VRVYPRDGSGDPLVLRAHDGAVGNAAFSPDGTELA---TV 1004

Query: 411  DGDTGSKLYSID 422
              D  +++ ++D
Sbjct: 1005 SADGTARVSTVD 1016



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 95/255 (37%), Gaps = 18/255 (7%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G     + V+   G  +    P    +++   +SP+ + VA  + D      V  +
Sbjct: 545 RVATGTADGFVRVIASPGGAVLATAPLPGGVVWSVAWSPDGRLVAVGSEDG-----VVRL 599

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                R  + +G     + +  F   G R +++  +D A  ++ +        RL     
Sbjct: 600 LGPDGRVRQSLGAPGLAVSSVAFDRAGTR-VVAGSQDGAARVWRLGAAV-PEVRLRGHRG 657

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               A+++PD  ++V     EG  +++     GS        +  +  D   +P G  + 
Sbjct: 658 SVAYAAFAPDGRRVV-TGGTEGTVRIWPADGEGSPVVL----RGHTVVDGAPTPDGSRL- 711

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           FT+ + +   +        + +L+  ++ +    W+  G  ++ +     D  ++L+ + 
Sbjct: 712 FTRGTDDVIRVWRTDDPRQRGQLVGHEALVDTVQWTRDGTRVLTASH---DGTARLWPV- 767

Query: 423 LNGRNETLINTPAYA 437
            +G     +  P   
Sbjct: 768 -HGGAALTVRDPGNV 781



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 80/252 (31%), Gaps = 21/252 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             +V+     +L V   DG       P+    L      P  +  A    D     R++L
Sbjct: 461 RRLVTADHAGTLRVFPLDGGGAPRTLPAGGVPLVRLALDPAGRIAAAGALDG----RLWL 516

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D   D  P+ +      +LA  FS +G R   +   D  + + +      A   L    
Sbjct: 517 ADLAGDAPPRSV-VHDGAVLALAFSPDGTRVA-TGTADGFVRVIASP--GGAV--LATAP 570

Query: 302 ---FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               +  S ++SPD   +   S+    + +  +       ++       +     +   G
Sbjct: 571 LPGGVVWSVAWSPDGRLVAVGSE----DGVVRLLGPDGRVRQSLGAPGLAVSSVAFDRAG 626

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +      G    +  +     + RL     ++    ++P GR ++       +   ++
Sbjct: 627 TRVVAGSQDGAA-RVWRLGAAVPEVRLRGHRGSVAYAAFAPDGRRVV---TGGTEGTVRI 682

Query: 419 YSIDLNGRNETL 430
           +  D  G    L
Sbjct: 683 WPADGEGSPVVL 694



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 50/290 (17%), Positives = 106/290 (36%), Gaps = 37/290 (12%)

Query: 104  NSLGAQVLV-TGRVIKEGKDRLRVE----FRLWDVKDRKQIIGK---------------K 143
              +G + LV T +  ++G   L        RLW V     +  +               +
Sbjct: 733  QLVGHEALVDTVQWTRDGTRVLTASHDGTARLWPVHGGAALTVRDPGNVIHSADLDPTER 792

Query: 144  FFSSPASWR--KIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDG 200
             F + +  R  ++    +  + + + G  G   S       + + SG +  ++ V   DG
Sbjct: 793  TFVTSSEDRTVRVWDAATGALVRELRGHDGPVLSAAFSPDGTLIASGSLDKTVRVWRADG 852

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                 +      +L    ++P+ + V  ++ D+     V++     D +P R+      +
Sbjct: 853  TGTPLVFRGHGAVLTAVTWTPDGKAVISSSQDE---ASVHVWPL--DGSPPRVVRAGRPV 907

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
                 + +G   L+  ++  A+  +S D +  A    L   LF   S + S D  +    
Sbjct: 908  FRAAVAPDGT--LLVPEQGGALRRFSPDGEERAPFPALPEGLF---SVAVSRDGRRWALA 962

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            S  +G  ++Y    +GS    + +  + +  +  +SP G  +A     G 
Sbjct: 963  SS-DGTVRVY--PRDGSGDPLVLRAHDGAVGNAAFSPDGTELATVSADGT 1009



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 80/228 (35%), Gaps = 15/228 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L   D  GA  R L            F+P+ +++   T D    LRV+ +D        
Sbjct: 430 RLWRADGTGA-PRGLGADGPARTDGLAFTPDGRRL--VTADHAGTLRVFPLDGGGAPRTL 486

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             G    + LA      G R   +   D    ++  DL  +A  R        ++ ++SP
Sbjct: 487 PAGGVPLVRLA--LDPAG-RIAAAGALDGR--LWLADLAGDAPPRSVVHDGAVLALAFSP 541

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D +++      +G   + V+ S G      +       +   WSP G L+A     G   
Sbjct: 542 DGTRVA-TGTADGF--VRVIASPGGAVLATAPLPGGVVWSVAWSPDGRLVAVGSEDG--- 595

Query: 372 AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            + ++  DG   + L      + +  +  +G  ++   +       +L
Sbjct: 596 VVRLLGPDGRVRQSLGAPGLAVSSVAFDRAGTRVVAGSQDGAARVWRL 643



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 62/200 (31%), Gaps = 17/200 (8%)

Query: 241 LMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
           L       AP+ +G +  +      F+ +G+R +     D A  +    L      R L 
Sbjct: 431 LWRADGTGAPRGLGADGPARTDGLAFTPDGRRLV---TADHAGTLRVFPLDGGGAPRTLP 487

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                 +  +  P        +      +L++    G    R S   + +     +SP G
Sbjct: 488 AGGVPLVRLALDPAGRIAAAGAL---DGRLWLADLAGDAPPR-SVVHDGAVLALAFSPDG 543

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             +A     G    I      G+      +    + +  WSP GR +       G     
Sbjct: 544 TRVATGTADGFVRVIA--SPGGAVLATAPLPGGVVWSVAWSPDGRLVAV-----GSEDGV 596

Query: 418 LYSIDLNGRNETLINTPAYA 437
           +  +  +GR    +  P  A
Sbjct: 597 VRLLGPDGRVRQSLGAPGLA 616



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 67/217 (30%), Gaps = 17/217 (7%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D              +  P+ + +          S +G     +  +     ++  D   
Sbjct: 380 DPPPRAVAIAQRLLSEPIPETVLDGVPKGEGLAVSPDGAWVA-AGGEGGGARLWRADGTG 438

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                  +        +++PD  ++V  +D  G   L V   +G    R           
Sbjct: 439 APRGLGADGPARTDGLAFTPDGRRLV-TADHAGT--LRVFPLDGGGAPRTLPAGGVPLVR 495

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLI----- 405
               P G + A     G    + +    G +  R +V D  + A  +SP G  +      
Sbjct: 496 LALDPAGRIAAAGALDG---RLWLADLAGDAPPRSVVHDGAVLALAFSPDGTRVATGTAD 552

Query: 406 -FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            F R      G+ L +  L G    ++ + A++ D +
Sbjct: 553 GFVRVIASPGGAVLATAPLPGG---VVWSVAWSPDGR 586


>gi|186686880|ref|YP_001870073.1| WD-40 repeat-containing protein [Nostoc punctiforme PCC 73102]
 gi|186469232|gb|ACC85032.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1170

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 86/237 (36%), Gaps = 26/237 (10%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            + D  G  +      +D  +    FSP+ + +   T     I+RV+  +    +     
Sbjct: 153 TLWDTSGKLLVEFKEDKDNPVMSASFSPDSKLII--TALRNGIVRVWDTN---GKLITEF 207

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPD 312
              R+++ +  FS NGK    +      +     D+       L    L I  SA++SPD
Sbjct: 208 TADRNLLKSAVFSPNGKLIFTTSFGTSRVW----DILGKLLAELKGRHLSIQ-SANFSPD 262

Query: 313 SSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S  IV  S            V  ++G +   + +  E       +SP G  I      G 
Sbjct: 263 SKLIVTTSLNNSDFFNRNAQVWDTSGKEIAEL-KGHEGDVTGANFSPDGKRIVTVSNDGT 321

Query: 370 KFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              I     D + + LL       N+   ++SP G+ +I +     D  S+L+  + 
Sbjct: 322 A-RIW----DTNGKMLLTLKGHQGNVSKASFSPDGQLVITASD---DGTSRLWDANA 370



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 50/287 (17%), Positives = 102/287 (35%), Gaps = 37/287 (12%)

Query: 130 LWDVKDRKQIIGKKFFSSPAS------WRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           +WD   +K +  K +  S +          +  T+ D   + +   K D ++ ++  S S
Sbjct: 120 IWDTSGKKLVELKGYNPSISPDCKFIVTTFLGATLWDTSGKLLVEFKEDKDNPVMSASFS 179

Query: 184 VVSGIIKNSLC-----VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
             S +I  +L      V D +G  I   T  R+ +L    FSPN + +   ++    +  
Sbjct: 180 PDSKLIITALRNGIVRVWDTNGKLITEFTADRN-LLKSAVFSPNGKLIFTTSFGTSRVWD 238

Query: 239 VYLMDTRIDRAPKRIGNFRS---MILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSN 292
           +           K +   +     I +  FS + K  + +   +      +    D    
Sbjct: 239 IL---------GKLLAELKGRHLSIQSANFSPDSKLIVTTSLNNSDFFNRNAQVWDTSGK 289

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L         A++SPD  +IV  S+ +G  +++   +NG     + +  + +    
Sbjct: 290 EIAELKGHEGDVTGANFSPDGKRIVTVSN-DGTARIW--DTNGKMLLTL-KGHQGNVSKA 345

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            +SP G L+      G        +   +  + L   +  +    SP
Sbjct: 346 SFSPDGQLVITASDDGTS------RLWDANAKQLATLNLGEKIAISP 386



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/230 (19%), Positives = 79/230 (34%), Gaps = 40/230 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F PN+Q +  A+   +DI +          +P  +  + S +    FS +G+   I+   
Sbjct: 20  FIPNRQLIVTASTIFKDIAQA---SGASKYSPIELNPYASTVENASFSPDGRFI-ITGFD 75

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---------------E 323
           +    I+  D   N    L        SA +SP+S  IV  S+R                
Sbjct: 76  NGTARIW--DKSGNLITELKAGENKVKSAFFSPNSKFIVTSSNRTKIWDTSGKKLVELKG 133

Query: 324 GKEQLY--------------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
               +               +  ++G       +DK+       +SP   LI     +G 
Sbjct: 134 YNPSISPDCKFIVTTFLGATLWDTSGKLLVEFKEDKDNPVMSASFSPDSKLIITALRNG- 192

Query: 370 KFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              + V   +G        D N L++  +SP+G+ LIF+          +
Sbjct: 193 --IVRVWDTNGKLITEFTADRNLLKSAVFSPNGK-LIFTTSFGTSRVWDI 239


>gi|318061227|ref|ZP_07979948.1| protease [Streptomyces sp. SA3_actG]
 gi|318076103|ref|ZP_07983435.1| protease [Streptomyces sp. SA3_actF]
          Length = 1074

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 69/192 (35%), Gaps = 21/192 (10%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+    + + D    ++   L      R++           SPD + + + S REG  ++
Sbjct: 14  GEFIAFTAEDD----VWIAPLDGGRAWRVSADNVPVQHPRISPDGATVAWTSKREGAPEV 69

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL 385
           +V    G   +R++           W+ +GD++A T              +  DGS  R 
Sbjct: 70  FVAPLEGGPARRLTYWGSNKTSVRGWTAEGDVVAITSHGQPSLRRTWAHALPLDGSASRR 129

Query: 386 LVE---DSNLQAP--------TWSPSGRSLIFSRKKDGDTGSKLYS-IDLNGRNETL-IN 432
           L      +    P        + S  GR   + ++  G T  KL+   D  G  + +  +
Sbjct: 130 LPYGPIGALAHEPEGERVLLGSVS-MGREAAWWKRYRGGTAGKLWLGPDAEGAWQRVHAD 188

Query: 433 TPAYASDPQWVG 444
                 DP WVG
Sbjct: 189 LDGNIEDPLWVG 200



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/268 (17%), Positives = 96/268 (35%), Gaps = 34/268 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +   DG    +   + +  +  PR SP+   VA+ +   E    V++         +
Sbjct: 24  DVWIAPLDGGRA-WRVSADNVPVQHPRISPDGATVAWTS-KREGAPEVFVAPLE-GGPAR 80

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTNTLFINISA 307
           R+  + S   + R +++ G    I+            +++ L  +A+ RL       ++ 
Sbjct: 81  RLTYWGSNKTSVRGWTAEGDVVAITSHGQPSLRRTWAHALPLDGSASRRLPYGPIGALAH 140

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-------------KRISQDKEASYFDPVW 354
              P+  +++  S   G+E  +  +  G                +R+  D + +  DP+W
Sbjct: 141 E--PEGERVLLGSVSMGREAAWWKRYRGGTAGKLWLGPDAEGAWQRVHADLDGNIEDPLW 198

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDG 412
              G  IAF        A+     DGS  R    VE     A   +  G  ++++     
Sbjct: 199 V--GGRIAFLSDHEGVGALYSSLPDGSDLRRHSPVEPDGFYARQAATDGTRVVWAS---- 252

Query: 413 DTGSKLYSI-DLNGRNETLIN-TPAYAS 438
               +L+ I DL G     ++  P    
Sbjct: 253 --AGRLWIIDDLEGAEPRPLDIGPGGQR 278



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 81/229 (35%), Gaps = 36/229 (15%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A+   DD     V++      RA  R+      +  PR S +G     + +++ A 
Sbjct: 14  GEFIAFTAEDD-----VWIAPLDGGRAW-RVSADNVPVQHPRISPDGATVAWTSKREGAP 67

Query: 283 DIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYV-----MQSNGS 336
           +++   L+     RLT       S   ++ +   +   S   G+  L       +  +GS
Sbjct: 68  EVFVAPLEGGPARRLTYWGSNKTSVRGWTAEGDVVAITSH--GQPSLRRTWAHALPLDGS 125

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTK-------------FSGEKFAIGV-MKKDGSQ 382
             +R+      +       P+G+ +                   G    + +    +G+ 
Sbjct: 126 ASRRLPYGPIGALAHE---PEGERVLLGSVSMGREAAWWKRYRGGTAGKLWLGPDAEGAW 182

Query: 383 ERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +R+  + D N++ P W   G  + F    +G     LYS   +G +   
Sbjct: 183 QRVHADLDGNIEDPLWV--GGRIAFLSDHEG--VGALYSSLPDGSDLRR 227



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 96/295 (32%), Gaps = 27/295 (9%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRY--LTPSRDQILFEPRFSPNQQK 225
           E   F +R      + V       L ++D  +GA  R   + P   +   +P   P  + 
Sbjct: 232 EPDGFYARQAATDGTRVVWASAGRLWIIDDLEGAEPRPLDIGPGGQRADLQPFAIPASRW 291

Query: 226 VAYATYDDEDILRVYL------MDTRIDRAPKRIGNFRSM-ILAPR-FSSNGK-RALISV 276
           ++ A  D        L        T  D   + +   + +    PR F  +G+       
Sbjct: 292 LSAARPDHTGRGSAVLVRGAVHWVTHRDGPARVLAGEQGVRARLPRTFRLDGEEWVAWVT 351

Query: 277 QKDEAMDIYSVDLQSNAT----ERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVM 331
             +    I        A      R+        +S + +PD  ++   S      ++ ++
Sbjct: 352 DAEGEDAIEFAPATGTAPGTAPRRIARGKLGRVLSFTVAPDGERLGVASH---DGRVLLV 408

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAIGVMKKDGSQERLLVE 388
           + +  + + + + +       V+SP    +A++    +   +  +  +  D +       
Sbjct: 409 ERSSGEVREVDRSENGDASGLVFSPDSTWLAWSHPGPDPLRQLKLAHVS-DLAPVEATPL 467

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLINTPAYASDP 440
                +P ++P G+ L F   +  D     ++ DL         LI   A    P
Sbjct: 468 RFKDYSPAFTPDGKHLAFLSDRAFDPLYDAHNFDLAFIGTTRPHLITLAATTPSP 522


>gi|229488622|ref|ZP_04382488.1| beta-lactamase family protein/peptidase S9 domain protein
           [Rhodococcus erythropolis SK121]
 gi|229324126|gb|EEN89881.1| beta-lactamase family protein/peptidase S9 domain protein
           [Rhodococcus erythropolis SK121]
          Length = 1127

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 96/307 (31%), Gaps = 58/307 (18%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T      + RI +V          N   +          L  +       P + P    +
Sbjct: 34  TSIAVSASGRIAYVRTEANPAADTNEHSIWLA----SPQLQLTAGPADTSPAWHPVSTLL 89

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALISVQKDE---- 280
            +   D     +++ +D     A +            AP FS +G R   S   D     
Sbjct: 90  VFVRPDSSGTPQLWKVDATGGPATQLTTTAQLPLGAGAPVFSPDGARIAFSAPVDRTAAG 149

Query: 281 -----------------------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                                     ++  DL + +  +LT+  +     +YSPD +++ 
Sbjct: 150 SSCLLVTKRLNYKVDGSGVRGSVRAHLFEFDLAAGSLRQLTDGDWDASHPAYSPDGTELA 209

Query: 318 FESDREGKEQL------YVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-- 368
           F +  +G   L      + +   + +   R+            W+P GD +    +    
Sbjct: 210 FTAAMDGDADLTRASSAWTVSLTDLASAPRMLGHARGIAGPLAWTPAGDAVVAVGWHTPI 269

Query: 369 -EKFAIGVMKKD-GSQERLLVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTG 415
                + V+ +D   ++R L    +             AP+++  G  ++F  +  G T 
Sbjct: 270 IHNNELLVLHRDQRVEDRSLTSGLDRNVMPGGTGYPGGAPSFTADGD-IVFCIRNHGST- 327

Query: 416 SKLYSID 422
            +L+ +D
Sbjct: 328 -ELHKVD 333



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 21/102 (20%)

Query: 360 LIAFTKF------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            IA+ +          + +I +       +  L       +P W P    L+F R  D  
Sbjct: 43  RIAYVRTEANPAADTNEHSIWLASP----QLQLTAGPADTSPAWHPVSTLLVFVR-PDSS 97

Query: 414 TGSKLYSIDLNGRNETLINT----------PAYASDPQWVGF 445
              +L+ +D  G   T + T          P ++ D   + F
Sbjct: 98  GTPQLWKVDATGGPATQLTTTAQLPLGAGAPVFSPDGARIAF 139


>gi|315231509|ref|YP_004071945.1| acylamino-acid-releasing enzyme [Thermococcus barophilus MP]
 gi|315184537|gb|ADT84722.1| acylamino-acid-releasing enzyme [Thermococcus barophilus MP]
          Length = 635

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 53/315 (16%), Positives = 102/315 (32%), Gaps = 60/315 (19%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
              ++  F    V          +   DG  +   T         P+FSP+   +A+ + 
Sbjct: 20  IHKNKTAFTVTEVNLEKDDYFSKIYLYDGRKVMQFTSG--PKDSNPKFSPDGNFMAFTSK 77

Query: 232 DDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--------QKDE- 280
            ++      +YL+ TR     K +  F+  I    FS +GK   +          +KD+ 
Sbjct: 78  RNKESKESELYLIPTR-GGEAKLLTRFKYGINDFEFSPDGKALAVISPVEVDRKKEKDDV 136

Query: 281 -------------------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES- 320
                                 I+ V+ +S    +LT      ++  +S D S+I F + 
Sbjct: 137 HIIKEIPFWFNGIGWIYGKRAQIFLVNTESGRKRKLTKGKLNILTLKWSDDGSKIYFIAQ 196

Query: 321 -DREGKEQL---YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFSGEKFA 372
            DRE K  +   YV+       ++++ D +    D V   +   +       +       
Sbjct: 197 EDRERKPMISDLYVLDVKSKKIEKLT-DSKWRIGDFVIIDEKHFVLRMSTLERGIPTNTH 255

Query: 373 IGVMKKDGSQERLLVE--------------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           I +   +  + + L E                  + P     G  + +         + L
Sbjct: 256 IYLFNAETKEIKKLTEKLDRSAYNSLNCDVRGKSRNPLIYKDG-WVYYIATDGPR--ANL 312

Query: 419 YSIDLNGRNETLINT 433
           + +DL G  E +I  
Sbjct: 313 FRVDLEGNIERVIAG 327


>gi|113477231|ref|YP_723292.1| WD-40 repeat-containing protein [Trichodesmium erythraeum IMS101]
 gi|110168279|gb|ABG52819.1| WD-40 repeat [Trichodesmium erythraeum IMS101]
          Length = 1858

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 82/217 (37%), Gaps = 17/217 (7%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                 L    FSPN Q +A  +   +  +R++    R  +  K +      + +  FS +
Sbjct: 1628 GHTDSLLSVSFSPNNQVIA--SSGKDKTIRLW---NREGKLLKTLVGHNEWVSSVSFSPD 1682

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            GK    S   D  + +++   +    + +       +  S+SP+   I   S       +
Sbjct: 1683 GKILA-SASDDGTVKLWTQ--KGVLLKTINAHSGWVLGVSFSPNGQAIATASY---DNTV 1736

Query: 329  YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
             +   +G   +   +    S     +SP G  IA + + G+     +   DGS  + L  
Sbjct: 1737 KLWSLDGELLRTFLKGASDSVTSVSFSPDGQAIASSSYDGKVKLWSLY--DGSLLKTLNG 1794

Query: 388  EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               ++ + ++SP G+ L    +   D    L+ + L+
Sbjct: 1795 HQDSVMSVSFSPDGKLLASGSR---DKTVILWDLALD 1828



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/243 (20%), Positives = 104/243 (42%), Gaps = 28/243 (11%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG +  ++ + +  G  +R +      ++    FSPN + +A    +    ++++ ++ +
Sbjct: 1219 SGSLDKTIKIWNYTGVLLRTIRTKS--VVKWVSFSPNGKMIA--AANANGTVQLWNLNGK 1274

Query: 246  IDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
            + +  K   GN    + +  FS +GKR + +   D+ + I+         E+ +T     
Sbjct: 1275 LLKTLKHGAGNHNYPVYSANFSPDGKRMV-TASGDQTVKIWRFFRNIPILEKTITGHKKQ 1333

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             I+AS+SPD   I   S     + + V Q +G+  K  S   + +     +SP G+ +A 
Sbjct: 1334 VINASFSPDGKIIASSST---DKTIKVWQLDGTLLKTFSGHGD-TVTQVTFSPDGETLAS 1389

Query: 364  TKFSGEKFAIGVMKKD------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              +  +      +K D      G + R+L         ++SP G+ L  + +   D   K
Sbjct: 1390 ASYD-KTIKFWSLKNDSLNVLQGHKHRVL-------GVSFSPDGQILASASQ---DNTIK 1438

Query: 418  LYS 420
            L+S
Sbjct: 1439 LWS 1441



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 53/299 (17%), Positives = 122/299 (40%), Gaps = 27/299 (9%)

Query: 137  KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII------K 190
            KQ++G++  S+   +R IA ++   +Y        + ++ I++       G +       
Sbjct: 1081 KQLLGEQNLSNDTEYR-IAASLQQAVYGVNKYNHLEGHNNIVWSVIFHPEGNLIASASAD 1139

Query: 191  NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             ++ +  RDG   + LT  ++++  +  FS + + +A A++D    ++++ +  +++  P
Sbjct: 1140 KTIKLWSRDGKLQKTLTNHKNRV-SKISFSSDGKYLASASHD--STVKIWDLQ-QLEMKP 1195

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              + +    ++   FS N K    S   D+ + I++    +    R   T  +    S+S
Sbjct: 1196 LSLKSHSDSVVTINFSPNNKMLA-SGSLDKTIKIWNY---TGVLLRTIRTKSVVKWVSFS 1251

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASY--FDPVWSPQGDLIAFTKFS 367
            P+   I   ++  G  QL+    NG   K +       +Y  +   +SP G  +  T   
Sbjct: 1252 PNGKMIA-AANANGTVQLW--NLNGKLLKTLKHGAGNHNYPVYSANFSPDGKRMV-TASG 1307

Query: 368  GEKFAIGVM--KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +   I          ++ +      +   ++SP G+ +  S     D   K++ +D  
Sbjct: 1308 DQTVKIWRFFRNIPILEKTITGHKKQVINASFSPDGKIIASSST---DKTIKVWQLDGT 1363



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 89/235 (37%), Gaps = 19/235 (8%)

Query: 192  SLCVMDRDGANIRYLTPS---RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            ++ + + +G  ++ L       +  ++   FSP+ +++  A+ D    ++++     I  
Sbjct: 1265 TVQLWNLNGKLLKTLKHGAGNHNYPVYSANFSPDGKRMVTASGD--QTVKIWRFFRNIPI 1322

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              K I   +  ++   FS +GK    S   D+ + ++ +D      +  +         +
Sbjct: 1323 LEKTITGHKKQVINASFSPDGKIIA-SSSTDKTIKVWQLD--GTLLKTFSGHGDTVTQVT 1379

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPD   +   S  +   + + ++++  +   + Q  +       +SP G ++A      
Sbjct: 1380 FSPDGETLASASY-DKTIKFWSLKNDSLN---VLQGHKHRVLGVSFSPDGQILASASQDN 1435

Query: 369  EKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                I +    G     L      + + ++S   + L        D   KL+ ++
Sbjct: 1436 T---IKLWSPTGKLLNNLEGHTDRVASVSFSSDAQILASGSY---DNTVKLWYLN 1484



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 100/258 (38%), Gaps = 36/258 (13%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G N        + I++   F P    +A A+ D      + L  +R  +  K + N ++ 
Sbjct: 1107 GVNKYNHLEGHNNIVWSVIFHPEGNLIASASADK----TIKLW-SRDGKLQKTLTNHKNR 1161

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIV 317
            +    FSS+GK    S   D  + I+  DLQ    + L+  +     ++ ++SP++  + 
Sbjct: 1162 VSKISFSSDGKYLA-SASHDSTVKIW--DLQQLEMKPLSLKSHSDSVVTINFSPNNKMLA 1218

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              S     + + +    G   + I       +    +SP G +IA    +G    + +  
Sbjct: 1219 SGSL---DKTIKIWNYTGVLLRTIRTKSVVKWV--SFSPNGKMIAAANANGT---VQLWN 1270

Query: 378  KDGSQERLLVED-SNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSI---------DL 423
             +G   + L     N   P     +SP G+ ++ +    GD   K++            +
Sbjct: 1271 LNGKLLKTLKHGAGNHNYPVYSANFSPDGKRMVTAS---GDQTVKIWRFFRNIPILEKTI 1327

Query: 424  NGRNETLINTPAYASDPQ 441
             G  + +IN  +++ D +
Sbjct: 1328 TGHKKQVIN-ASFSPDGK 1344



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 73/194 (37%), Gaps = 16/194 (8%)

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +    +++ +  F   G     S   D+ + ++S D      + LTN        S+S D
Sbjct: 1114 LEGHNNIVWSVIFHPEGNLIA-SASADKTIKLWSRD--GKLQKTLTNHKNRVSKISFSSD 1170

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
               +   S       + +      + K +S +    S     +SP   ++A         
Sbjct: 1171 GKYLASASH---DSTVKIWDLQQLEMKPLSLKSHSDSVVTINFSPNNKMLASGSLDKT-- 1225

Query: 372  AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETL 430
             I +    G   R +   S ++  ++SP+G+ +  +   +G    +L+  +LNG+  +TL
Sbjct: 1226 -IKIWNYTGVLLRTIRTKSVVKWVSFSPNGKMIA-AANANGTV--QLW--NLNGKLLKTL 1279

Query: 431  INTPAYASDPQWVG 444
             +     + P +  
Sbjct: 1280 KHGAGNHNYPVYSA 1293



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 57/150 (38%), Gaps = 7/150 (4%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
               +    +    FSPN Q +A A+YD+     V L     +     +      + +  F
Sbjct: 1707 TINAHSGWVLGVSFSPNGQAIATASYDN----TVKLWSLDGELLRTFLKGASDSVTSVSF 1762

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S +G+    S   D  + ++S+    +  + L       +S S+SPD   +   S R+  
Sbjct: 1763 SPDGQAIA-SSSYDGKVKLWSL-YDGSLLKTLNGHQDSVMSVSFSPDGKLLASGS-RDKT 1819

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
              L+ +  +    +  S  ++    +P  S
Sbjct: 1820 VILWDLALDSLLDQGCSWVRDYLRTNPHVS 1849



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 45/106 (42%), Gaps = 5/106 (4%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +    N++ +   DG  +R         +    FSP+ Q +A ++YD +    V L    
Sbjct: 1729 TASYDNTVKLWSLDGELLRTFLKGASDSVTSVSFSPDGQAIASSSYDGK----VKLWSLY 1784

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                 K +   +  +++  FS +GK    S  +D+ + ++ + L S
Sbjct: 1785 DGSLLKTLNGHQDSVMSVSFSPDGKLLA-SGSRDKTVILWDLALDS 1829



 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 61/196 (31%), Gaps = 12/196 (6%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              SG     +    R+   +        + +    FSP+ + +A ++ D    ++V+ +D
Sbjct: 1304 TASGDQTVKIWRFFRNIPILEKTITGHKKQVINASFSPDGKIIASSSTD--KTIKVWQLD 1361

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                   K        +    FS +G+    S   D+ +  +S+   S    +       
Sbjct: 1362 ---GTLLKTFSGHGDTVTQVTFSPDGETLA-SASYDKTIKFWSLKNDSLNVLQ--GHKHR 1415

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +  S+SPD   +   S       + +    G     + +          +S    ++A 
Sbjct: 1416 VLGVSFSPDGQILASASQ---DNTIKLWSPTGKLLNNL-EGHTDRVASVSFSSDAQILAS 1471

Query: 364  TKFSGEKFAIGVMKKD 379
              +        +   +
Sbjct: 1472 GSYDNTVKLWYLNSPN 1487


>gi|332665099|ref|YP_004447887.1| dipeptidyl aminopeptidase [Haliscomenobacter hydrossis DSM 1100]
 gi|332333913|gb|AEE51014.1| dipeptidyl aminopeptidase [Haliscomenobacter hydrossis DSM 1100]
          Length = 692

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 105/318 (33%), Gaps = 46/318 (14%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGII----------KNSLCVMDRDGANIRYLTPSR 210
           DI +      G     ++FV  +  +G            + S  +   D  + R L    
Sbjct: 80  DISELSFTPSG---KHVVFVRGNTPNGQGYAANPAQLQMETSRFLYMTDLEHGRDLRKIA 136

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
               F  + +P+ + +AY   +   +    L+DT +   P+ +   R  + A R++ +G 
Sbjct: 137 AGYAF--KIAPDGRSMAY--LNAGQVWLASLVDTVV--KPQVLFKIRGGVSALRWNPDGS 190

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--------- 321
           +      + +   I   DL + +      +   N    +SPD   + +  +         
Sbjct: 191 KLAFVNTRGDHSFIGIYDLAAKSISFPDPSADKNQDPVWSPDGEWLAYIRNPIQADEFLF 250

Query: 322 ---REGKE-QLYVMQSNGSDQKRISQDKEA----------SYFDPVWSPQGDLIAFTKFS 367
              R G    + ++     + K I +  E           +  + +   +G  I F    
Sbjct: 251 APRRTGFPWSIRLLHVKTGEVKEIWKADEGKGSVLVGDLPAVENKLLWAKGQQIIFPWEK 310

Query: 368 GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  +  +    +LL      ++    +P G++L +S          ++ +D+N  
Sbjct: 311 DGWVHLNALDIEKKSAKLLTPGAGEVENVVLAPDGQTLYYSCNIGDLNRRHIWKMDINTA 370

Query: 427 NETLINTPAYASDPQWVG 444
               I T     +  W  
Sbjct: 371 QAEQI-TEGEGIE--WSP 385



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 76/206 (36%), Gaps = 28/206 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVD-LQSNATERLT----NTLFINIS-ASYSPDSSQIVFE 319
           S++GK        + + ++YS   +  N   R+T        I+IS  S++P    +VF 
Sbjct: 37  SADGKNIAWVFNDNGSRNVYSASGVNFNDGARITGFEEKDNGIDISELSFTPSGKHVVFV 96

Query: 320 SDREGKEQLYVMQSNG--SDQKRISQDKE----------ASYFDPVWSPQGDLIAFTKFS 367
                  Q Y         +  R     +          A+ +    +P G  +A+   +
Sbjct: 97  RGNTPNGQGYAANPAQLQMETSRFLYMTDLEHGRDLRKIAAGYAFKIAPDGRSMAYLN-A 155

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G+ +   ++      + L      + A  W+P G  L F   +   +   +Y  DL  ++
Sbjct: 156 GQVWLASLVDTVVKPQVLFKIRGGVSALRWNPDGSKLAFVNTRGDHSFIGIY--DLAAKS 213

Query: 428 ETLIN-------TPAYASDPQWVGFM 446
            +  +        P ++ D +W+ ++
Sbjct: 214 ISFPDPSADKNQDPVWSPDGEWLAYI 239


>gi|325922936|ref|ZP_08184650.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           gardneri ATCC 19865]
 gi|325546583|gb|EGD17723.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           gardneri ATCC 19865]
          Length = 789

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 88/214 (41%), Gaps = 17/214 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATE---RLT 298
            + +R  +   +      A  +S +G+   + ++  +  D +   VDL +   +   RL+
Sbjct: 322 LKGNRGVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDLANAKLQPRHRLS 381

Query: 299 NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++ +IN   +   + PD+  +   S+  G  QLY ++ NG  ++R     +     P  S
Sbjct: 382 DSAWINWDFNDFGWLPDNRTLWLLSEESGYSQLYTVEGNGKPRQR--TRGKWEVSMPAPS 439

Query: 356 PQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  + F         + +  +     Q   +   + ++  + SP+G+ L+  R  D  
Sbjct: 440 ADGSGMYFLCNQKWPGDYEVCKLDLRTDQLTEVTALNGVEGFSLSPNGQQLL-VRYSDSY 498

Query: 414 TGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
              +L  +   G   T++    TPA+ + P W+ 
Sbjct: 499 LPQQLAVVPAAGGQATVLTDTRTPAFKAQP-WIA 531



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 65/191 (34%), Gaps = 17/191 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-------PNQQKV 226
           + R + V    V    +    +   D AN +     R        +        P+ + +
Sbjct: 346 DGRNVAVEIRAVDNKDR---WIASVDLANAKLQPRHRLSDSAWINWDFNDFGWLPDNRTL 402

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDI 284
              + +        L     +  P++    +  +  P  S++G        +      ++
Sbjct: 403 WLLSEESG---YSQLYTVEGNGKPRQRTRGKWEVSMPAPSADGSGMYFLCNQKWPGDYEV 459

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQ 343
             +DL+++    +T    +    S SP+  Q++   SD    +QL V+ + G     ++ 
Sbjct: 460 CKLDLRTDQLTEVTALNGVEGF-SLSPNGQQLLVRYSDSYLPQQLAVVPAAGGQATVLTD 518

Query: 344 DKEASYFDPVW 354
            +  ++    W
Sbjct: 519 TRTPAFKAQPW 529



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 97/299 (32%), Gaps = 79/299 (26%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A+  ++ PS DQ      +  + ++V Y    +   +R          A +R+ +     
Sbjct: 31  ADPDWIGPSVDQA----WWQWDGKQVQYLLKREGSPVRDTYRQGIGGAAAERVADNARAG 86

Query: 261 LA---PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           L    P + +  +R L +   D    I+  DL+S A  +LT +  +     ++ D   I 
Sbjct: 87  LDADNPSYDAARQRMLFARNGD----IFLRDLRSGALTQLTRSNEVESRPQFASDGGAIW 142

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
               R G    Y  +++G   +      E    DP  +P+ D++       +   +  ++
Sbjct: 143 ----RAGNN-WYHWRADGGTAQVAVVKAE---RDPNAAPKADVL----REQQLATLATLR 190

Query: 378 KDGSQERLLVEDSNLQ---------APTW------------SPSGRSLIFSRK------- 409
           +D  Q   L    +           AP +            SP GR L+   +       
Sbjct: 191 RDREQREALRTQEDTWRRADATRATAPVYLGDEVEIVDSALSPDGRHLLVVTQAKSAEEG 250

Query: 410 -------------------------KDGDTGSKLYSIDLNGRNETLI---NTPAYASDP 440
                                    ++      L+ +D++      +     P  A+DP
Sbjct: 251 QAGKMPKYVTESGYEEFQEVRTRVGRNAPVAHALWLVDVSAGTAKPLSFDPLPGIATDP 309


>gi|332711539|ref|ZP_08431470.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332349517|gb|EGJ29126.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1620

 Score = 83.1 bits (204), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 75/203 (36%), Gaps = 18/203 (8%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ + +A  + DD     V L + + +     +   +  +    FS +G+    +  
Sbjct: 1305 SFSPDGEIIASGSRDDN---TVKLWNPKEEIRKLTLQGHQGFVNGVDFSPDGQLIA-TAS 1360

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D+ + ++  + Q      L        S S+SPDS  I   S+    +    + +    
Sbjct: 1361 NDKTVKLW--NRQGKLLHTLAGHSDRVYSVSFSPDSQIIASASE----DSTVKLWTREGK 1414

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              R       +     +S  G LIA          + + K+DG+    L  D  L + ++
Sbjct: 1415 LLRTLAGHTDAINRVSFSSDGQLIASASNDKT---VKLWKQDGTLITTLPGDRKLSSVSF 1471

Query: 398  SPSGRSLIFSRKKDGDTGSKLYS 420
            SP G+ ++      G  G  +  
Sbjct: 1472 SPDGKRIV-----AGAAGGSIVI 1489



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 91/254 (35%), Gaps = 19/254 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S      + +  RDG          D+ ++   FSPN Q +A A+ D      V L + R
Sbjct: 1149 SASKDKMVKLWSRDGK-FINTLEGHDKAVWSVIFSPNSQTIASASDDQ----TVKLWN-R 1202

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 K +      I +  FS NG+    S   D  + +++ +        L        
Sbjct: 1203 DGTLRKTLAGHDDAINSVSFSPNGEWIA-SGTSDGKIKLWTGN--GTPISTLPGHKDTVN 1259

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              S++PD   +   S  +   +L+ +        + +      Y    +SP G++IA   
Sbjct: 1260 QVSFTPDGKMLASASL-DFTVKLWSLDQILPKVFQPTSYTVYGYGA-SFSPDGEIIASGS 1317

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                   +   K++  +  L      +    +SP G+ +  +     D   KL++     
Sbjct: 1318 RDDNTVKLWNPKEEIRKLTLQGHQGFVNGVDFSPDGQLIATASN---DKTVKLWN----- 1369

Query: 426  RNETLINTPAYASD 439
            R   L++T A  SD
Sbjct: 1370 RQGKLLHTLAGHSD 1383



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 51/240 (21%), Positives = 99/240 (41%), Gaps = 24/240 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ +  RDG  I  LT     + +   FSP+ + +A A+ D      + L   R
Sbjct: 1067 SASKDKTVKLWGRDGRLINTLTGHGKGVKWV-SFSPDGETIASASGDQ----TIKLWK-R 1120

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 K +   +  +L+  FS++G+    S  KD+ + ++S D        L        
Sbjct: 1121 DGTLLKTLKGHQDAVLSVSFSNDGELIA-SASKDKMVKLWSRD--GKFINTLEGHDKAVW 1177

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S  +SP+S  I   SD    + + +   +G+ +K ++   + +     +SP G+ IA + 
Sbjct: 1178 SVIFSPNSQTIASASD---DQTVKLWNRDGTLRKTLA-GHDDAINSVSFSPNGEWIA-SG 1232

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             S  K  +      G+   +     +   +   +++P G+ L  +     D   KL+S+D
Sbjct: 1233 TSDGKIKLWT----GNGTPISTLPGHKDTVNQVSFTPDGKMLASASL---DFTVKLWSLD 1285



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 95/252 (37%), Gaps = 24/252 (9%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ +  RDG  I+ L    +  ++   FSP+ Q +A A+ D      V L    
Sbjct: 1026 SASSDQTIKLWSRDGQLIKDL-KGHEDTVWCVSFSPDNQIIASASKDK----TVKLWGRD 1080

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                    G+ + +     FS +G+    S   D+ + ++  D      + L       +
Sbjct: 1081 GRLINTLTGHGKGVKW-VSFSPDGETIA-SASGDQTIKLWKRD--GTLLKTLKGHQDAVL 1136

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S S+S D   I   S    K+++  + S         +  + + +  ++SP    IA   
Sbjct: 1137 SVSFSNDGELIASAS----KDKMVKLWSRDGKFINTLEGHDKAVWSVIFSPNSQTIASAS 1192

Query: 366  FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                   + +  +DG+  + L   D  + + ++SP+G  +  S   DG    KL+     
Sbjct: 1193 DDQT---VKLWNRDGTLRKTLAGHDDAINSVSFSPNGEWIA-SGTSDGK--IKLW----T 1242

Query: 425  GRNETLINTPAY 436
            G    +   P +
Sbjct: 1243 GNGTPISTLPGH 1254



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 92/259 (35%), Gaps = 21/259 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            E++ S     ++ +  RDG  ++ L   +D +L    FS + + +A A+ D   +++++ 
Sbjct: 1104 ETIASASGDQTIKLWKRDGTLLKTLKGHQDAVLSV-SFSNDGELIASASKD--KMVKLW- 1159

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
              +R  +    +      + +  FS N +    S   D+ + ++  +      + L    
Sbjct: 1160 --SRDGKFINTLEGHDKAVWSVIFSPNSQTIA-SASDDQTVKLW--NRDGTLRKTLAGHD 1214

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S S+SP+   I      +GK +L+                + +     ++P G ++
Sbjct: 1215 DAINSVSFSPNGEWIA-SGTSDGKIKLWTGN---GTPISTLPGHKDTVNQVSFTPDGKML 1270

Query: 362  AFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            A        F + +   D       +           ++SP G  +        D   KL
Sbjct: 1271 ASASLD---FTVKLWSLDQILPKVFQPTSYTVYGYGASFSPDGEIIA--SGSRDDNTVKL 1325

Query: 419  YSIDLNGRNETLINTPAYA 437
            ++     R  TL     + 
Sbjct: 1326 WNPKEEIRKLTLQGHQGFV 1344



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 62/372 (16%), Positives = 124/372 (33%), Gaps = 48/372 (12%)

Query: 80   NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL-RVEFRLWDVKDRKQ 138
            N +S     + I +  S  + + W   G  +      +   KD + +V F      D K 
Sbjct: 1218 NSVSFSPNGEWIASGTSDGKIKLWTGNGTPI----STLPGHKDTVNQVSF----TPDGKM 1269

Query: 139  IIGKKFFSSPASWRKIAHTISDDIYQSITGEK-----GDFNSRILFVSESVVSGIIKNSL 193
            +       +   W        D I   +         G   S               N++
Sbjct: 1270 LASASLDFTVKLWSL------DQILPKVFQPTSYTVYGYGASFSPDGEIIASGSRDDNTV 1323

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             + +      +         +    FSP+ Q +A A+ D      V L + R  +    +
Sbjct: 1324 KLWNPKEEIRKLTLQGHQGFVNGVDFSPDGQLIATASNDK----TVKLWN-RQGKLLHTL 1378

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                  + +  FS +  + + S  +D  + +++   +      L          S+S D 
Sbjct: 1379 AGHSDRVYSVSFSPD-SQIIASASEDSTVKLWT--REGKLLRTLAGHTDAINRVSFSSDG 1435

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
              I   S+    + + + + +G+     +   +       +SP G  I     +G    I
Sbjct: 1436 QLIASASN---DKTVKLWKQDGTLIT--TLPGDRKLSSVSFSPDGKRIV-AGAAGGSIVI 1489

Query: 374  GVMKKDGS-----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               ++D S      +R++ +   +   ++ P+ + +I S   DG    KL+  + NG   
Sbjct: 1490 W-SRQDISWQQFESKRVVGDTKTVYDVSFHPN-QDIIASGSADGTV--KLW--NPNG--- 1540

Query: 429  TLINTPAYASDP 440
             LI T    S+P
Sbjct: 1541 ILIATLKQGSEP 1552



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 99/244 (40%), Gaps = 28/244 (11%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +     ++ + +R G  +  L    D++     FSP+ Q +A A+ D      V L  TR
Sbjct: 1358 TASNDKTVKLWNRQGKLLHTLAGHSDRVYSV-SFSPDSQIIASASEDS----TVKLW-TR 1411

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN- 304
              +  + +      I    FSS+G+    S   D+ + ++  D        +T       
Sbjct: 1412 EGKLLRTLAGHTDAINRVSFSSDGQLIA-SASNDKTVKLWKQDG-----TLITTLPGDRK 1465

Query: 305  -ISASYSPDSSQIVFESDREGKEQLYVMQSNGS----DQKRISQDKEASYFDPVWSPQGD 359
              S S+SPD  +IV  +   G   +   + + S    + KR+  D + + +D  + P  D
Sbjct: 1466 LSSVSFSPDGKRIV--AGAAGGSIVIWSRQDISWQQFESKRVVGDTK-TVYDVSFHPNQD 1522

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +IA     G    + +   +G     L + S  +++  +SP G +L+     +      +
Sbjct: 1523 IIASGSADGT---VKLWNPNGILIATLKQGSEPVESVNFSPDGETLV---SINAANRVSI 1576

Query: 419  YSID 422
            +++D
Sbjct: 1577 WNLD 1580



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 11/135 (8%)

Query: 291  SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            +    RL       +S S SPDS  I   S     + + +   +G   K + +  E + +
Sbjct: 999  TQERNRLDGHQGSVLSVSVSPDSQLIASASS---DQTIKLWSRDGQLIKDL-KGHEDTVW 1054

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
               +SP   +IA          + +  +DG     L      ++  ++SP G ++     
Sbjct: 1055 CVSFSPDNQIIASASKDKT---VKLWGRDGRLINTLTGHGKGVKWVSFSPDGETIA---S 1108

Query: 410  KDGDTGSKLYSIDLN 424
              GD   KL+  D  
Sbjct: 1109 ASGDQTIKLWKRDGT 1123


>gi|67924632|ref|ZP_00518044.1| similar to Periplasmic component of the Tol biopolymer transport
           system [Crocosphaera watsonii WH 8501]
 gi|67853531|gb|EAM48878.1| similar to Periplasmic component of the Tol biopolymer transport
           system [Crocosphaera watsonii WH 8501]
          Length = 195

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 4/130 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFD-PVWSP 356
           NT        +S +   +VF SDR+GK  +++    NG        ++  S  D P  S 
Sbjct: 55  NTRSSEQHPRFSYEGRYLVFASDRQGKRSVWLYDQINGGLLPLPGLNQLGSVQDQPDISA 114

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  I +      K  I V  +  S+   + ++    ++ P+ S +GR + F   + G  
Sbjct: 115 DGRYIVYVSEQEGKQDIFVYDRQTSRADNITKNILGEVRHPSISGNGRFVAFESNRSGQW 174

Query: 415 GSKLYSIDLN 424
              +Y   LN
Sbjct: 175 DIIIYDRGLN 184



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 3/128 (2%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASY 309
           + N RS    PRFS  G+  + +  +     ++  D  +     L        +      
Sbjct: 53  VLNTRSSEQHPRFSYEGRYLVFASDRQGKRSVWLYDQINGGLLPLPGLNQLGSVQDQPDI 112

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S D   IV+ S++EGK+ ++V     S    I+++       P  S  G  +AF      
Sbjct: 113 SADGRYIVYVSEQEGKQDIFVYDRQTSRADNITKNILGEVRHPSISGNGRFVAFESNRSG 172

Query: 370 KFAIGVMK 377
           ++ I +  
Sbjct: 173 QWDIIIYD 180



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 2/119 (1%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALI 274
            PRFS   + + +A+                   P    N    +   P  S++G+  + 
Sbjct: 62  HPRFSYEGRYLVFASDRQGKRSVWLYDQINGGLLPLPGLNQLGSVQDQPDISADGRYIVY 121

Query: 275 SVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +++   DI+  D Q++  + +T N L      S S +   + FES+R G+  + +  
Sbjct: 122 VSEQEGKQDIFVYDRQTSRADNITKNILGEVRHPSISGNGRFVAFESNRSGQWDIIIYD 180



 Score = 36.5 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 4/51 (7%)

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +L   S+ Q P +S  GR L+F+  + G     LY   +NG    L+  P 
Sbjct: 53  VLNTRSSEQHPRFSYEGRYLVFASDRQGKRSVWLYD-QINGG---LLPLPG 99


>gi|156055132|ref|XP_001593490.1| hypothetical protein SS1G_04917 [Sclerotinia sclerotiorum 1980]
 gi|154702702|gb|EDO02441.1| hypothetical protein SS1G_04917 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 1581

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 92/263 (34%), Gaps = 26/263 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--------FSPNQQKV--AYATYDDED 235
           S I  + L     D    R+L  +R  I   P         F+P    +   +  Y    
Sbjct: 729 SNIKGSELYTFIYD--AKRFLLHNRVGIEQAPLQIYCSALFFAPENSIIRKTFQEYIPSW 786

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           I ++    +    A + +    S + +  FS +G +   S   D+ + ++   +   + +
Sbjct: 787 IYKISRTRSNWSAALQTLEGHSSWVRSVAFSPDGTKVA-SGSYDKTIRLWDT-VTGESLQ 844

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L        S ++SPD +++   S     + + +  +   +  +  +   +      +S
Sbjct: 845 TLEGHSIWVSSVAFSPDGTKVASASY---DKTIRLWDTITGESLQTLEGHWSWVSSVAFS 901

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGD 413
           P G  +A          I +      +    +E   S + +  +SP G  +    +   D
Sbjct: 902 PDGTKVASGSRDET---IRLWDVVTGESLQTLEGHWSWVNSVAFSPDGTKVASGSR---D 955

Query: 414 TGSKLYSIDLNGRNETLINTPAY 436
              +L+ + + G +   +   +Y
Sbjct: 956 QTIRLWDV-VTGESLQTLKGHSY 977



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 64/172 (37%), Gaps = 9/172 (5%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V SG    ++ + D                +    FSP+  KVA A+YD      + L 
Sbjct: 822 KVASGSYDKTIRLWDTVTGESLQTLEGHSIWVSSVAFSPDGTKVASASYDK----TIRLW 877

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           DT    + + +    S + +  FS +G +   S  +DE + ++ V +   + + L     
Sbjct: 878 DTITGESLQTLEGHWSWVSSVAFSPDGTKVA-SGSRDETIRLWDV-VTGESLQTLEGHWS 935

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
              S ++SPD +++   S     + + +      +  +  +         ++
Sbjct: 936 WVNSVAFSPDGTKVASGSR---DQTIRLWDVVTGESLQTLKGHSYFDTSSIF 984



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 64/195 (32%), Gaps = 33/195 (16%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K          RLWD    + +   +            H+I              + S 
Sbjct: 821 TKVASGSYDKTIRLWDTVTGESLQTLE-----------GHSI--------------WVSS 855

Query: 177 ILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + F  +   V S     ++ + D                +    FSP+  KVA  + D+ 
Sbjct: 856 VAFSPDGTKVASASYDKTIRLWDTITGESLQTLEGHWSWVSSVAFSPDGTKVASGSRDE- 914

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               + L D     + + +    S + +  FS +G +   S  +D+ + ++ V +   + 
Sbjct: 915 ---TIRLWDVVTGESLQTLEGHWSWVNSVAFSPDGTKVA-SGSRDQTIRLWDV-VTGESL 969

Query: 295 ERLTNTLFINISASY 309
           + L    + + S+ +
Sbjct: 970 QTLKGHSYFDTSSIF 984


>gi|311747326|ref|ZP_07721111.1| putative dipeptidyl peptidase IV [Algoriphagus sp. PR1]
 gi|126579043|gb|EAZ83207.1| putative dipeptidyl peptidase IV [Algoriphagus sp. PR1]
          Length = 691

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 104/303 (34%), Gaps = 79/303 (26%)

Query: 179 FVSESVVSGIIK-----NSLCVMDRDGANIRYLTPSRDQILFEP---------------- 217
           F S     G +K      ++ + + DG+N+  +T   ++                     
Sbjct: 102 FASAESPDGKLKAFTQDRNMYISNPDGSNVVPITTDGNEENQVKYGIATWVYGEELGQIT 161

Query: 218 --RFSPNQQKVAYATYDDEDILRVYLM--------DTRIDRAPKRI-------------- 253
              +SP+ +KVA+  + ++D+ + Y++           ++  PK                
Sbjct: 162 AMWWSPDSKKVAFYRFVEKDVKKYYVLLDQLSLYDSLEVEAYPKVGEPNLPVDLMVYDLE 221

Query: 254 -----------------GNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSNAT 294
                            G+  + I    ++ +GK  L          +++ + + ++  +
Sbjct: 222 TKEITELDIRDGKAFNDGDLGTYIYGVSWTPDGKELLYHSTNRLQNTLELRAANPETGKS 281

Query: 295 ERLTNTLFINISASY---SP------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             + +  ++    S+   SP      D    ++ S+R G    Y+   +G+    I+   
Sbjct: 282 RTIIHEEWL---PSFVVNSPEMEVLEDGEHFIWASERSGFNNYYLYNFDGTLVNAITSHP 338

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                      +  L+ +   SGE      +  ++ DG+++  L + +   +   SP G+
Sbjct: 339 FEVSNIVRVDEEEGLLYYMARSGENHMLMQLHRVEIDGTKDTQLTDPAFNHSVAISPDGK 398

Query: 403 SLI 405
             +
Sbjct: 399 YFV 401



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/283 (12%), Positives = 70/283 (24%), Gaps = 82/283 (28%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN------FRSMILAPRFSSNGKR 271
            +S +     Y          V    T       R          R    A   S +GK 
Sbjct: 53  NWSEDGDSFEYVQSGKIYRYDVKKKTTEEIGEASRPERRRYNRPARGRQFASAESPDGKL 112

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-------------------ISASYSPD 312
              +  ++    +Y  +   +    +T                          +  +SPD
Sbjct: 113 KAFTQDRN----MYISNPDGSNVVPITTDGNEENQVKYGIATWVYGEELGQITAMWWSPD 168

Query: 313 SSQIVFESDRE---------------------------GKEQ----LYVMQSNGSDQKRI 341
           S ++ F    E                           G+      L V      +   +
Sbjct: 169 SKKVAFYRFVEKDVKKYYVLLDQLSLYDSLEVEAYPKVGEPNLPVDLMVYDLETKEITEL 228

Query: 342 ---------SQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDS 390
                      D     +   W+P G  + +   +       +     +  + R ++ + 
Sbjct: 229 DIRDGKAFNDGDLGTYIYGVSWTPDGKELLYHSTNRLQNTLELRAANPETGKSRTIIHE- 287

Query: 391 NLQAPTW---SP------SGRSLIFSRKKDGDTGSKLYSIDLN 424
               P++   SP       G   I++ ++ G     LY+ D  
Sbjct: 288 -EWLPSFVVNSPEMEVLEDGEHFIWASERSGFNNYYLYNFDGT 329



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 82/271 (30%), Gaps = 88/271 (32%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL----------QSNATER 296
           + AP+   + +S  ++  +S +G          ++  IY  D+           S    R
Sbjct: 36  NMAPQIYSSVKSGAISANWSEDGDSFEYV----QSGKIYRYDVKKKTTEEIGEASRPERR 91

Query: 297 LTNTLFINISASY--SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-------- 346
             N        +   SPD     F  DR     +Y+   +GS+   I+ D          
Sbjct: 92  RYNRPARGRQFASAESPDGKLKAFTQDR----NMYISNPDGSNVVPITTDGNEENQVKYG 147

Query: 347 -ASYFDPV---------WSPQGDLIAFTKFSGEK-------------------------- 370
            A++             WSP    +AF +F  +                           
Sbjct: 148 IATWVYGEELGQITAMWWSPDSKKVAFYRFVEKDVKKYYVLLDQLSLYDSLEVEAYPKVG 207

Query: 371 -----FAIGVMKKDGSQERLL-------VEDSN----LQAPTWSPSGRSLIFSRKKDGDT 414
                  + V   +  +   L         D +    +   +W+P G+ L++        
Sbjct: 208 EPNLPVDLMVYDLETKEITELDIRDGKAFNDGDLGTYIYGVSWTPDGKELLYHSTNRLQN 267

Query: 415 GSKLYSID-LNGRNETLINTPAYASDPQWVG 444
             +L + +   G++ T+I+        +W+ 
Sbjct: 268 TLELRAANPETGKSRTIIHE-------EWLP 291


>gi|73670768|ref|YP_306783.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
 gi|72397930|gb|AAZ72203.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
          Length = 938

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 68/177 (38%), Gaps = 14/177 (7%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G R +    ++   DIY  DL ++   R+T         S   D  +IV++ DR G
Sbjct: 635 PDIYGNRIVWQDLRNGNYDIYMYDLSTSRETRITANESNQTYPSLYCD--RIVWQDDRNG 692

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +  +Y+   + S + +IS    A          GD I +  +      I V     S+E 
Sbjct: 693 QYDIYMYNISTSKETQISTSGRAQRPKIY----GDRIMWMDYRTRNKGIYVHDLSTSKET 748

Query: 385 LLVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            ++       P +    G  +++   +       +Y  DL+   ET I +   A+ P
Sbjct: 749 RIISKG---IPQYINMQGNLIVWHDLR--YISPDIYMYDLSTSKETQITSNGEATFP 800



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 89/259 (34%), Gaps = 28/259 (10%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + + D   +    +T +     +   +     ++ +    +     +Y+ +    
Sbjct: 649 NGNYDIYMYDLSTSRETRITANESNQTYPSLY---CDRIVWQDDRNGQ-YDIYMYNISTS 704

Query: 248 RAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           +  +   + R+            G R +    +     IY  DL ++   R+  +  I  
Sbjct: 705 KETQISTSGRAQ------RPKIYGDRIMWMDYRTRNKGIYVHDLSTSKETRII-SKGI-- 755

Query: 306 SASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              Y     + IV+   R     +Y+   + S + +I+ + EA++ +      G+ I + 
Sbjct: 756 -PQYINMQGNLIVWHDLRYISPDIYMYDLSTSKETQITSNGEATFPNVY----GNRIVWK 810

Query: 365 --KFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                     I +     S+  ++    S+   P     G  +++   ++      +Y  
Sbjct: 811 EWHREDVTTDIYMYDLSTSKKTQITTNKSSQYYPAI--YGNKIVWEDFRN--EYINIYMY 866

Query: 422 DLNGRNETLINTPAYASDP 440
           DL+ + ET I T   A DP
Sbjct: 867 DLSTQKETQITTSGGAHDP 885



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 92/271 (33%), Gaps = 23/271 (8%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            IT  + +     L+    V          +   + +  +    S       P+      
Sbjct: 666 RITANESNQTYPSLYCDRIVWQDDRNGQYDIYMYNISTSKETQISTSGRAQRPKIY--GD 723

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++ +  Y   +   +Y+ D    +  + I       +  +    G   +    +  + DI
Sbjct: 724 RIMWMDYRTRN-KGIYVHDLSTSKETRIISKGIPQYINMQ----GNLIVWHDLRYISPDI 778

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREG-KEQLYVMQSNGSDQKRIS 342
           Y  DL ++   ++T+        +     ++IV+ E  RE     +Y+   + S + +I+
Sbjct: 779 YMYDLSTSKETQITSN-GEATFPNVY--GNRIVWKEWHREDVTTDIYMYDLSTSKKTQIT 835

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            +K + Y+  ++   G+ I +  F  E   I +      +E  +        P     G 
Sbjct: 836 TNKSSQYYPAIY---GNKIVWEDFRNEYINIYMYDLSTQKETQITTSGGAHDPDI--YGD 890

Query: 403 SLIFSRKKDGDTG------SKLYSIDLNGRN 427
            +++ +     +       S +Y  DL  R 
Sbjct: 891 RIVYRKYSYHRSPVDHVFFSDIYMYDLTARP 921



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 92/290 (31%), Gaps = 43/290 (14%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +        ++++I++   +V    ++  L V   D  N      + +     P      
Sbjct: 79  EHYVSHPAIYDNKIVYCLYNVNENPVRVRLYV--YDILNSTSSLITENLSHCVPDIY--G 134

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM- 282
            ++ +A   D     VY+ +       +     R     P  S    + +     D    
Sbjct: 135 DRIVWAAERDYKT-DVYMYNISTHTQTQITT--RGSASNP--SIYENKIVWVGYGDNGTI 189

Query: 283 -----------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF----ESDREGKEQ 327
                       I   DL +     + NT+    +     D  +IV+     SD  G+  
Sbjct: 190 IDKNNNSISRDSICIYDLSTKKETMI-NTIGRAYAPVIYSD--RIVWKDSRNSDFTGRRG 246

Query: 328 -LYVMQSNGSDQKRISQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +Y+   +   + RIS   ++S      SP   GD I +      K+ I +      +E 
Sbjct: 247 DVYMYNLSTEKESRISYSGQSSLGS---SPAIYGDRIVWDDNRNGKWDIYMYNLSTKKET 303

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKD------GD-TGSKLYSIDLNGRN 427
            +    +   P     G  +++S  +       GD     +Y  DL  R 
Sbjct: 304 QITTSGSAMGPDI--YGDRIVYSDNRQRLTPGPGDVYFCDIYVYDLTARP 351



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 88/241 (36%), Gaps = 40/241 (16%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS---SN--GKRALISVQK 278
            K+ Y  Y       V     R+      I N  S ++    S    +  G R + + ++
Sbjct: 90  NKIVYCLY------NVNENPVRVRLYVYDILNSTSSLITENLSHCVPDIYGDRIVWAAER 143

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE------------GKE 326
           D   D+Y  ++ ++   ++T T     + S   +  +IV+    +             ++
Sbjct: 144 DYKTDVYMYNISTHTQTQIT-TRGSASNPSIYEN--KIVWVGYGDNGTIIDKNNNSISRD 200

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS 381
            + +   +   +  I+    A Y   ++S   D I +     + F+G +  + +      
Sbjct: 201 SICIYDLSTKKETMINTIGRA-YAPVIYS---DRIVWKDSRNSDFTGRRGDVYMYNLSTE 256

Query: 382 QERLLVEDSNLQAPTWSP--SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +E  +         + SP   G  +++   ++G     +Y  +L+ + ET I T   A  
Sbjct: 257 KESRISYSGQSSLGS-SPAIYGDRIVWDDNRNGKW--DIYMYNLSTKKETQITTSGSAMG 313

Query: 440 P 440
           P
Sbjct: 314 P 314


>gi|301161946|emb|CBW21490.1| putative cytochrome c binding protein [Bacteroides fragilis 638R]
          Length = 478

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 58/331 (17%), Positives = 115/331 (34%), Gaps = 68/331 (20%)

Query: 147 SPASWRKIAHTISD-DIYQSITGEKGDFNSRILFVSESVVSGIIKNSL------------ 193
               W+K+    +  DI+  IT  +G   +R   + +++ +  I   L            
Sbjct: 87  PTKKWKKLLQKAAGKDIFIRITLLRGGKWTRYADIKDTISNEPIDEYLVYRLLYPGYELW 146

Query: 194 -----CVMDRDGANIRYLTPSRD---QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                   D  G     +  +R+   Q +    F+ N  +        +    +   + +
Sbjct: 147 NEMGIYQRDLTGYEETPIAENRNFGKQCINCHTFNQNSPETMMVHVRGKSGGTLICKNGK 206

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------DEAMDIYSVDL-------QS 291
           +++   +   F++      +  +G+    S+ +            I   DL        +
Sbjct: 207 VEKVNTKPEGFKNGGTYAAWHPSGRYIAFSMNEIQQFFHSSGQKPIEVSDLAADLIVYDT 266

Query: 292 NATERLTNT-----LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                LT++      ++    +++PD   + F      KE++  + S   D  RI  D E
Sbjct: 267 EKKTFLTDSLICGERYMETFPNWTPDGKTLYFCRGNAYKEKM-PLDSIRYDLCRIGFDPE 325

Query: 347 ASYFD-----------------PVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQ 382
           +  F                  P  SP G  + FT      F+I        ++  D  +
Sbjct: 326 SGKFSTPECVYRASEEGKSVSFPRVSPDGKYLMFTLSDYGNFSIWHPESELCLLTMDTGE 385

Query: 383 ERLL--VEDSNLQAP-TWSPSGRSLIFSRKK 410
            RLL  V  +++++  TWS SGR  +FS K+
Sbjct: 386 IRLLNEVNSNDVESFHTWSSSGRWFVFSSKR 416


>gi|218440928|ref|YP_002379257.1| hypothetical protein PCC7424_4015 [Cyanothece sp. PCC 7424]
 gi|218173656|gb|ACK72389.1| WD40 domain protein beta Propeller [Cyanothece sp. PCC 7424]
          Length = 174

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 3/136 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSN---ATERLTNTLFINISASYSPDSSQIVFE 319
           P  S +G+       ++    I   DLQ         L     I  S S S     +V+ 
Sbjct: 37  PSLSGDGRLVAFVSNRNGKSQILLYDLQGRRFIGLRGLDPGGAIAESPSLSRTGRYLVYI 96

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S  +G+  + +        + ++Q   +   +P  SP G  I F      ++ I V+ + 
Sbjct: 97  SSIQGRPDIVLYDQATGRSQLLTQGYRSWIRNPNISPDGRYIVFETARRGQWDIEVLDRG 156

Query: 380 GSQERLLVEDSNLQAP 395
              E  + + S + +P
Sbjct: 157 PLIELDIADGSRVPSP 172



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 4/124 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSP 356
           N+ F +   S S D   + F S+R GK Q+ +    G     +       A    P  S 
Sbjct: 29  NSRFNDEQPSLSGDGRLVAFVSNRNGKSQILLYDLQGRRFIGLRGLDPGGAIAESPSLSR 88

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDT 414
            G  + +      +  I +  +   + +LL +        P  SP GR ++F   + G  
Sbjct: 89  TGRYLVYISSIQGRPDIVLYDQATGRSQLLTQGYRSWIRNPNISPDGRYIVFETARRGQW 148

Query: 415 GSKL 418
             ++
Sbjct: 149 DIEV 152



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 4/120 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRAL 273
           +P  S + + VA+ +  +    ++ L D +  R     G      +A  P  S  G+  +
Sbjct: 36  QPSLSGDGRLVAFVSNRNGKS-QILLYDLQGRRFIGLRGLDPGGAIAESPSLSRTGRYLV 94

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                    DI   D  +  ++ LT        + + SPD   IVFE+ R G+  + V+ 
Sbjct: 95  YISSIQGRPDIVLYDQATGRSQLLTQGYRSWIRNPNISPDGRYIVFETARRGQWDIEVLD 154



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 37/116 (31%), Gaps = 11/116 (9%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYL----TPSRDQILFEPRFSPNQQKVAYATYD 232
           + FVS             ++  D    R++          I   P  S   + + Y +  
Sbjct: 46  VAFVSNRNGKSQ------ILLYDLQGRRFIGLRGLDPGGAIAESPSLSRTGRYLVYISSI 99

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                 + L D    R+      +RS I  P  S +G+  +    +    DI  +D
Sbjct: 100 QGRP-DIVLYDQATGRSQLLTQGYRSWIRNPNISPDGRYIVFETARRGQWDIEVLD 154



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           L    N + P+ S  GR + F   ++G +   LY  DL GR 
Sbjct: 28  LNSRFNDEQPSLSGDGRLVAFVSNRNGKSQILLY--DLQGRR 67


>gi|72160460|ref|YP_288117.1| WD-40 repeat-containing tyrosine protein kinase [Thermobifida fusca
           YX]
 gi|1346729|sp|P49695|PKWA_THECU RecName: Full=Probable serine/threonine-protein kinase pkwA
 gi|886024|gb|AAB05822.1| PkwA [Thermomonospora curvata]
 gi|71914192|gb|AAZ54094.1| Tyrosine protein kinase:WD-40 repeat:Serine/threonine protein
           kinase [Thermobifida fusca YX]
          Length = 742

 Score = 83.1 bits (204), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 46/295 (15%), Positives = 93/295 (31%), Gaps = 39/295 (13%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             +WDV    ++   +            HT  D +        G              SG
Sbjct: 483 IHVWDVASGDELHTLE-----------GHT--DWVRAVAFSPDGALL----------ASG 519

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               ++ + D   A  R +       + +  FSP+   VA  + D        L +    
Sbjct: 520 SDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDG----TARLWNVATG 575

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-IS 306
                +      + A  FS +G     S  +D  + ++  D+ +     +      N +S
Sbjct: 576 TEHAVLKGHTDYVYAVAFSPDGSMVA-SGSRDGTIRLW--DVATGKERDVLQAPAENVVS 632

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPD S +V  SD      +++      +     +          +SP G L+A +  
Sbjct: 633 LAFSPDGSMLVHGSDST----VHLWDVASGEALHTFEGHTDWVRAVAFSPDGALLA-SGS 687

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 +  +        L      + +  + P G +L  + +   D   +++ I
Sbjct: 688 DDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTLASASE---DGTIRIWPI 739


>gi|166710292|ref|ZP_02241499.1| dipeptidyl peptidase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 789

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 17/214 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATE---RLT 298
            + +RA +   +      A  +S +G+   + ++  +  D +   VDL +   +   RL+
Sbjct: 322 LKGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDLDNAKLQPRHRLS 381

Query: 299 NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++ +IN   +   + PD+  +   S+  G  QLY M+ N   ++R     +     PV S
Sbjct: 382 DSAWINWDFNDFGWLPDNRTLWLLSEESGYSQLYTMEGNSKPRQR--TRGKWEVSMPVPS 439

Query: 356 PQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  + F         + +  +     Q   +   + ++  + SP+GR L+        
Sbjct: 440 ADGSGMFFLCNQKWPGDYEVCKLDLRNDQLTEVTALNGVEGFSLSPNGRQLL-VSYSGSY 498

Query: 414 TGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
             ++L  +   G   T++    TPA+ + P W+ 
Sbjct: 499 LPTQLAVVPATGGQATVLTDTRTPAFKAQP-WIA 531



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 16/142 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--S 258
           A+  ++ PS DQ      +  + ++V Y        +R     +      +R+ +     
Sbjct: 31  ADPDWIGPSVDQA----WWQWDGKQVQYLLKRAGSPVRDTYRQSTAGGTAERVADTARAG 86

Query: 259 MILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +  A P + +  +R L +   D    I+  DL+S A  +LT +  I     ++ D   I 
Sbjct: 87  LDAANPSYDATRQRMLFARNGD----IFLRDLRSGALTQLTRSNEIESRPQFASDGGAIW 142

Query: 318 FESDREGKEQLYVMQSNGSDQK 339
               R G    Y  +++G   +
Sbjct: 143 ----RAGNN-WYHWRADGGTAQ 159



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 61/191 (31%), Gaps = 17/191 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-------PNQQKV 226
           + R + V    V    +    +   D  N +     R        +        P+ + +
Sbjct: 346 DGRNVAVEIRAVDNKDR---WIASVDLDNAKLQPRHRLSDSAWINWDFNDFGWLPDNRTL 402

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDI 284
              + +        L     +  P++    +  +  P  S++G        +      ++
Sbjct: 403 WLLSEESG---YSQLYTMEGNSKPRQRTRGKWEVSMPVPSADGSGMFFLCNQKWPGDYEV 459

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQ 343
             +DL+++    +T    +    S SP+  Q++          QL V+ + G     ++ 
Sbjct: 460 CKLDLRNDQLTEVTALNGVEGF-SLSPNGRQLLVSYSGSYLPTQLAVVPATGGQATVLTD 518

Query: 344 DKEASYFDPVW 354
            +  ++    W
Sbjct: 519 TRTPAFKAQPW 529



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 52/369 (14%), Positives = 108/369 (29%), Gaps = 85/369 (23%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +D   ++ +  +         R  A T        +T    +  SR  F S+        
Sbjct: 94  YDATRQRMLFARNGDIFLRDLRSGALT-------QLT-RSNEIESRPQFASDGGAIWRAG 145

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPN-----QQKVAYATYDDEDILRVYLMDTR 245
           N+      DG   +      ++   +P  +P      +Q++A       D  +   + T+
Sbjct: 146 NNWYHWRADGGTAQVAVVKAER---DPDAAPKPDVLREQQLATLATLRRDKEQRDALRTQ 202

Query: 246 IDRAPKRIGNFRSM---------ILAPRFSSNGKRALISVQKDEAMD------------- 283
            D   +      +          I+    S +G+  L+  Q   A +             
Sbjct: 203 DDAWRRADATRAAAPVYLGDEVEIVDSALSPDGRHLLVVTQATNAEEGQAGKMPKYVTES 262

Query: 284 ---------------------IYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFES 320
                                ++ VD+ +   + L+      I            +    
Sbjct: 263 GYEEFQEVRTRVGRNASVAHALWLVDVSAGTAKSLSFDPLPGIATDP--------LAALR 314

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKK 378
               ++ L      G+   R+  D + S     WS  G  +A        +   I  +  
Sbjct: 315 KAAKRDAL-----KGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDL 369

Query: 379 DGSQER---LLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           D ++ +    L + + +        W P  R+L    ++ G   S+LY+++ N +     
Sbjct: 370 DNAKLQPRHRLSDSAWINWDFNDFGWLPDNRTLWLLSEESG--YSQLYTMEGNSKPRQRT 427

Query: 432 NTPAYASDP 440
                 S P
Sbjct: 428 RGKWEVSMP 436


>gi|253563729|ref|ZP_04841186.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251947505|gb|EES87787.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 478

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 57/331 (17%), Positives = 115/331 (34%), Gaps = 68/331 (20%)

Query: 147 SPASWRKIAHTISD-DIYQSITGEKGDFNSRILFVSESVVSGIIKNSL------------ 193
               W+K+    +  +I+  IT  +G   +R   + +++ +  I   L            
Sbjct: 87  PTKKWKKLLQKAAGKEIFIRITLLRGGKWTRYADIKDTISNEPIDEYLVYRLLYPGYELW 146

Query: 194 -----CVMDRDGANIRYLTPSRD---QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                   D  G     +  +R+   Q +    F+ N  +        +    +   + +
Sbjct: 147 NEMGIYQRDLTGYEETPIAENRNFGKQCINCHTFNQNSPETMMVHVRGKSGGTLVCKNGK 206

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------DEAMDIYSVDL-------QS 291
           +++   +   F++      +  +G+    S+ +            I   DL        +
Sbjct: 207 VEKVNTKPEGFKNGGTYAAWHPSGRYIAFSMNEIQQFFHSSGQKPIEVSDLAADLMVYDT 266

Query: 292 NATERLTNT-----LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                LT++      ++    +++PD   + F      KE++  + S   D  RI  D E
Sbjct: 267 EKKTFLTDSLICGERYMETFPNWTPDGKTLYFCRGNAYKEKM-PLDSIRYDLCRIGFDPE 325

Query: 347 ASYFD-----------------PVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQ 382
           +  F                  P  SP G  + FT      F+I        ++  D  +
Sbjct: 326 SGKFGTPECVYRASEEGKSVSFPRVSPDGKYLMFTLSDYGNFSIWHPESELCLLTMDTGE 385

Query: 383 ERLL--VEDSNLQAP-TWSPSGRSLIFSRKK 410
            RLL  V  +++++  TWS SGR  +FS K+
Sbjct: 386 IRLLNEVNSNDVESFHTWSSSGRWFVFSSKR 416


>gi|67921369|ref|ZP_00514887.1| Protein kinase:G-protein beta WD-40 repeat [Crocosphaera watsonii
           WH 8501]
 gi|67856481|gb|EAM51722.1| Protein kinase:G-protein beta WD-40 repeat [Crocosphaera watsonii
           WH 8501]
          Length = 734

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 52/335 (15%), Positives = 104/335 (31%), Gaps = 65/335 (19%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            V      +           ++W+VK  K I  + F    +S        S D     T 
Sbjct: 429 SVAYSPDGKYLASGSWDNTVKIWEVKTGKLI--RTFEGDFSSV-----AYSPDGRYLATY 481

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            + DF++             I+N + + +     +        + +    +SP+ + +A 
Sbjct: 482 REPDFDT-------------IENPIKIWEVKTGKLLRTLKGHSKGVHSIAYSPDGKYLAI 528

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           + +++        +  R     K I  F    +   +S +GK      + +  + I+   
Sbjct: 529 SNWENP-------VKIREVNTGKLIRTFEGYSILVAYSLDGKYLA--TESENTIKIWE-- 577

Query: 289 LQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            ++    R LT      +S +YSPD   +   S       + + +       R       
Sbjct: 578 AKTGKLVRTLTGHSDSVVSVAYSPDGKYLASGS---WDNTVKIWEVKTGKSIRTLTGFSG 634

Query: 348 ---SYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-----------------KDGSQERLLV 387
              S     +SP G  +A            ++                    G   + L 
Sbjct: 635 WLSSLTSISYSPDGKYLAARCNIARVSHDSMLDDTVKKWDVGHPICTWEVATGKVIQTLT 694

Query: 388 -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              SN+ +  +SP G+ L  S     D   K++ +
Sbjct: 695 GHASNINSVAYSPDGKYLASSSS---DRQIKIWRV 726



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 79/227 (34%), Gaps = 24/227 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + +A  ++D  + ++++ + T      K I  F     +  +S +G+      +
Sbjct: 431 AYSPDGKYLASGSWD--NTVKIWEVKTG-----KLIRTFEGDFSSVAYSPDGRYLATYRE 483

Query: 278 KDEAMDIYSVDL----QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            D       + +           L        S +YSPD   +   S+ E   ++  + +
Sbjct: 484 PDFDTIENPIKIWEVKTGKLLRTLKGHSKGVHSIAYSPDGKYLA-ISNWENPVKIREVNT 542

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-L 392
                 ++ +  E       +S  G  +A    S     I   K  G   R L   S+ +
Sbjct: 543 G-----KLIRTFEGYSILVAYSLDGKYLA--TESENTIKIWEAKT-GKLVRTLTGHSDSV 594

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            +  +SP G+ L        D   K++ +       TL     + S 
Sbjct: 595 VSVAYSPDGKYLASGSW---DNTVKIWEVKTGKSIRTLTGFSGWLSS 638


>gi|86160034|ref|YP_466819.1| hypothetical protein Adeh_3616 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85776545|gb|ABC83382.1| hypothetical protein Adeh_3616 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 1041

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 69/172 (40%), Gaps = 5/172 (2%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           ++R  T SR   + +P FS +   +A+    ++    VY++        +R+ N      
Sbjct: 458 DLRPPTGSRFITVADPTFSADASHLAFVGVAEDGQQDVYVVPV-TGGVARRVTNDGYTEK 516

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              + ++G            ++++ +D  +    RLT     +       D S ++F SD
Sbjct: 517 DLHWGADGLYCASDATDHGRLNLFRIDPATGERTRLTTGPSTDRHPYPQADGS-VLFSSD 575

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             GK  LY+++      +R++ D       P  +P+   +    F+G  F +
Sbjct: 576 ARGKPDLYLLK--SGAVQRLT-DFTTGLTSPAVAPKARGVLAATFNGGLFRL 624



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 69/185 (37%), Gaps = 4/185 (2%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSV 287
             + +    R  L   R        G+    +  P FS++        V +D   D+Y V
Sbjct: 439 HKFTEGRTARFQLGKRRKLDLRPPTGSRFITVADPTFSADASHLAFVGVAEDGQQDVYVV 498

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +      R+TN  +      +  D      ++   G+  L+ +     ++ R++    +
Sbjct: 499 PVTGGVARRVTNDGYTEKDLHWGADGLYCASDATDHGRLNLFRIDPATGERTRLTT-GPS 557

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +   P     G  + F+  +  K  + ++K  G+ +RL    + L +P  +P  R ++ +
Sbjct: 558 TDRHPYPQADGS-VLFSSDARGKPDLYLLK-SGAVQRLTDFTTGLTSPAVAPKARGVLAA 615

Query: 408 RKKDG 412
               G
Sbjct: 616 TFNGG 620



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 8/170 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           + IT     F++    ++   V+   +  + V+   G   R +T        +  +  + 
Sbjct: 466 RFITVADPTFSADASHLAFVGVAEDGQQDVYVVPVTGGVARRVTNDG-YTEKDLHWGADG 524

Query: 224 QKVAYATYDDEDILRVYLMDTR-IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
               Y   D  D  R+ L           R+    S    P   ++G   L S       
Sbjct: 525 ---LYCASDATDHGRLNLFRIDPATGERTRLTTGPSTDRHPYPQADG-SVLFSSDARGKP 580

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           D+Y   L+S A +RLT+      S + +P +  ++  +   G  +L  + 
Sbjct: 581 DLYL--LKSGAVQRLTDFTTGLTSPAVAPKARGVLAATFNGGLFRLVEVP 628


>gi|289642687|ref|ZP_06474827.1| pentapeptide repeat protein [Frankia symbiont of Datisca glomerata]
 gi|289507517|gb|EFD28476.1| pentapeptide repeat protein [Frankia symbiont of Datisca glomerata]
          Length = 1744

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 85/232 (36%), Gaps = 22/232 (9%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+   +A  T D      V L D R  R  + + +    + +  FS +G     +  
Sbjct: 1455 AFSPDGTLLATGTQDGP----VSLWDVRTGRRQRILADHTQWVSSVAFSPDGSTIA-TAA 1509

Query: 278  KDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  + ++  D  +      LT       S  +SPD + I   S+ +   +L+ + + G 
Sbjct: 1510 GDHTVRLW--DTTTGDPLPPLTGHTGPVRSVEFSPDRTTIASGSN-DCTVRLWDI-ATGR 1565

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
              + ++ ++ +      +SP G  IA    +     + +      +    ++   S + +
Sbjct: 1566 RLRTLTGNRTSWMSSVAFSPDGSTIA---AAAGDRTVRLWDTTTGEPLHTLQGHISTVWS 1622

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
              +SP G  +        D   +L+  D      TL+     A    W  F+
Sbjct: 1623 VRFSPDGSVIA---SGSNDGTVRLWRADTGTLIATLLGPTKDA----WAVFV 1667



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 71/220 (32%), Gaps = 14/220 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G     + + D      + +     Q +    FSP+   +A A  D      V L DT 
Sbjct: 1465 TGTQDGPVSLWDVRTGRRQRILADHTQWVSSVAFSPDGSTIATAAGDH----TVRLWDTT 1520

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFIN 304
                   +      + +  FS +      S   D  + ++ +         LT N     
Sbjct: 1521 TGDPLPPLTGHTGPVRSVEFSPDRTTIA-SGSNDCTVRLWDI-ATGRRLRTLTGNRTSWM 1578

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++SPD S I   +   G   + +  +   +     Q   ++ +   +SP G +IA  
Sbjct: 1579 SSVAFSPDGSTIAAAA---GDRTVRLWDTTTGEPLHTLQGHISTVWSVRFSPDGSVIASG 1635

Query: 365  KFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRS 403
               G    + + + D       L+  +      +   G  
Sbjct: 1636 SNDGT---VRLWRADTGTLIATLLGPTKDAWAVFVRDGSY 1672



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 62/204 (30%), Gaps = 35/204 (17%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G  I        V  RLWD      +                          +TG  G  
Sbjct: 1502 GSTIATAAGDHTV--RLWDTTTGDPL------------------------PPLTGHTGPV 1535

Query: 174  NSRILFVSESV-VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
             S       +   SG    ++ + D   G  +R LT +R   +    FSP+   +A A  
Sbjct: 1536 RSVEFSPDRTTIASGSNDCTVRLWDIATGRRLRTLTGNRTSWMSSVAFSPDGSTIAAAAG 1595

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D      V L DT        +    S + + RFS +G     S   D  + ++  D  +
Sbjct: 1596 DR----TVRLWDTTTGEPLHTLQGHISTVWSVRFSPDGSVIA-SGSNDGTVRLWRADTGT 1650

Query: 292  NATERLTNTLFINISASYSPDSSQ 315
                 L      +  A +  D S 
Sbjct: 1651 LIATLL--GPTKDAWAVFVRDGSY 1672


>gi|119509783|ref|ZP_01628927.1| Peptidase C14, caspase catalytic subunit p20 [Nodularia spumigena
            CCY9414]
 gi|119465518|gb|EAW46411.1| Peptidase C14, caspase catalytic subunit p20 [Nodularia spumigena
            CCY9414]
          Length = 1727

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 85/224 (37%), Gaps = 14/224 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++V       S+ +  RDG  +  L   +  +     FSP+ Q +A A+ D      + L
Sbjct: 1463 KTVALASADQSIQIRQRDGTLLHTLKGHKHWVRSM-SFSPDDQILASASADK----TIKL 1517

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
              +R  R    +      +   +FS +GK    S   D+ + ++S+D      +      
Sbjct: 1518 W-SRDGRLLHTLDGHNGWVTNIQFSPDGKIIA-SASADKTIKLWSLD--GRLLKTFPGHS 1573

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S +++PD   I   SD      + +   +GS   +  Q          +S  G ++
Sbjct: 1574 ASIWSINFAPDGKTIASASD---DTTVKLWNLDGS-LLQTFQGHSGLVTHVSFSADGKML 1629

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            A +    +   +  +      +     + ++++  +SP G+ L+
Sbjct: 1630 A-SASDDDTIKLWNINSGILLKTFFGHNGDVKSVNFSPDGKMLV 1672



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 73/226 (32%), Gaps = 20/226 (8%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G   R        +     FSP+ Q +A    D+     + L  +          +   +
Sbjct: 1112 GTQERNRLTHNSWVSSV-SFSPDGQILASGYADN----SIKLWGSNGSLLATLTEHQDGV 1166

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                 FS NGK    S   D ++ ++S D        L   +    S S+SP+   +   
Sbjct: 1167 NSL-SFSPNGKMLA-SASNDNSIKLWSRD--GKLLTTLIGHIHSVNSVSFSPNGEVLA-- 1220

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                  +    + S              S     +SP+GD +A     G    + +   D
Sbjct: 1221 --SGSNDNTAKLWSRNGKLLVNFIGHNGSVKSVSFSPEGDTMASASDDGT---VKLWSLD 1275

Query: 380  GSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            G     L      +   ++SP G+++        D   KL+S D N
Sbjct: 1276 GRLLSTLPASTREVLDVSFSPDGQTIA---SASADHTIKLWSRDGN 1318



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 89/241 (36%), Gaps = 20/241 (8%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++ S    N++ + + +G  ++ L PS  + +    F+ + + VA A+ D         +
Sbjct: 1423 NITSFSSDNTMKIWNLNGELLQTL-PSPIEDVTSISFTRDGKTVALASADQS-----IQI 1476

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
              R       +   +  + +  FS +  + L S   D+ + ++S D        L     
Sbjct: 1477 RQRDGTLLHTLKGHKHWVRSMSFSPD-DQILASASADKTIKLWSRD--GRLLHTLDGHNG 1533

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               +  +SPD   I   S     + + +   +G   K       AS +   ++P G  IA
Sbjct: 1534 WVTNIQFSPDGKIIASAS---ADKTIKLWSLDGRLLKTF-PGHSASIWSINFAPDGKTIA 1589

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                      + +   DGS  +        +   ++S  G+ L  +   D     KL++I
Sbjct: 1590 SASDDTT---VKLWNLDGSLLQTFQGHSGLVTHVSFSADGKMLASASDDD---TIKLWNI 1643

Query: 422  D 422
            +
Sbjct: 1644 N 1644



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 86/243 (35%), Gaps = 26/243 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S    NS+ +  RDG  +  L      +     FSPN + +A  + D+            
Sbjct: 1180 SASNDNSIKLWSRDGKLLTTLIGHIHSVNSV-SFSPNGEVLASGSNDN--------TAKL 1230

Query: 246  IDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
              R  K + NF     +     FS  G     S   D  + ++S+D        L  +  
Sbjct: 1231 WSRNGKLLVNFIGHNGSVKSVSFSPEGDTMA-SASDDGTVKLWSLD--GRLLSTLPASTR 1287

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              +  S+SPD   I   S     +    + S   +  R  +      +   +SP G ++A
Sbjct: 1288 EVLDVSFSPDGQTIASAS----ADHTIKLWSRDGNLLRTIEGHSGGVWQVKFSPDGKIMA 1343

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                      I +  + G+    L   S+ + + ++SP  + L  +     D   +L+ +
Sbjct: 1344 SASADKT---IKLWTRAGNLLGTLQGHSHEVNSLSFSPDSQRLASASD---DNTIRLWKL 1397

Query: 422  DLN 424
            + N
Sbjct: 1398 ERN 1400



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 105/275 (38%), Gaps = 21/275 (7%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            + + +      ++   W +    + + I  + + +   F+     ++ +   G +K    
Sbjct: 1215 NGEVLASGSNDNTAKLWSRNGKLLVNFIGHNGSVKSVSFSPEGDTMASASDDGTVK---- 1270

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            +   DG  +    P+  + + +  FSP+ Q +A A+ D      + L  +R     + I 
Sbjct: 1271 LWSLDG-RLLSTLPASTREVLDVSFSPDGQTIASASADH----TIKLW-SRDGNLLRTIE 1324

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                 +   +FS +GK    S   D+ + +++     N    L        S S+SPDS 
Sbjct: 1325 GHSGGVWQVKFSPDGKIMA-SASADKTIKLWT--RAGNLLGTLQGHSHEVNSLSFSPDSQ 1381

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            ++   SD +   +L+ ++ N     +     + S  D  ++  G  I     S     I 
Sbjct: 1382 RLASASD-DNTIRLWKLERN---LPQTFYGHKGSVNDVKFTVDGSNITSFS-SDNTMKIW 1436

Query: 375  VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSR 408
                +G   + L     ++ + +++  G+++  + 
Sbjct: 1437 --NLNGELLQTLPSPIEDVTSISFTRDGKTVALAS 1469



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 79/208 (37%), Gaps = 29/208 (13%)

Query: 238  RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             +        +   R+    S + +  FS +G + L S   D ++ ++  +   +    L
Sbjct: 1104 NILQQAVYGTQERNRLT-HNSWVSSVSFSPDG-QILASGYADNSIKLWGSN--GSLLATL 1159

Query: 298  TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWS 355
            T       S S+SP+   +   S+      + +   +G   K ++       S     +S
Sbjct: 1160 TEHQDGVNSLSFSPNGKMLASASN---DNSIKLWSRDG---KLLTTLIGHIHSVNSVSFS 1213

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKD 411
            P G+++A              K      +LLV     + ++++ ++SP G ++  +    
Sbjct: 1214 PNGEVLASGSNDNTA------KLWSRNGKLLVNFIGHNGSVKSVSFSPEGDTMASASD-- 1265

Query: 412  GDTGSKLYSIDLNGRNETLINTPAYASD 439
             D   KL+S  L+GR   L   PA   +
Sbjct: 1266 -DGTVKLWS--LDGR--LLSTLPASTRE 1288


>gi|172036046|ref|YP_001802547.1| hypothetical protein cce_1131 [Cyanothece sp. ATCC 51142]
 gi|171697500|gb|ACB50481.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 903

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 105/327 (32%), Gaps = 50/327 (15%)

Query: 120 GKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
             DR  +        RLWD    K I   K  +             + +Y       G +
Sbjct: 577 ADDRYLISAASDNTIRLWDRDTGKAIKQLKQHT-------------NWVYSVACSADGRW 623

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     V  G    ++ + D             +  +    F P+ Q +   ++D 
Sbjct: 624 ----------VAIGYNDWTVRLWDIIEQREVNCLEGHESAVSSVAFCPDSQHLISGSWDG 673

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD----- 288
                + + D    +  + +    + +     S NG+    S   D+ + ++ +      
Sbjct: 674 ----TLRVWDILTGKCKRILQGHENWVSCVAVSPNGQWVA-SGSWDKTVCLWEITNNWPH 728

Query: 289 LQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            + +   R+      +I   ++SPDS  +   S+    + + + +     Q +  +  + 
Sbjct: 729 FKGSKPTRILQGHLEDIEGVAFSPDSQLMASSSN---DKTIRIWEVASGQQVQQLEGHKY 785

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIF 406
           S  D V+SP G  IA            V+   G +  R       ++   +S  GR L+ 
Sbjct: 786 SVDDVVFSPDGQFIASVSRDKTVRVWHVIS--GKEIHRFQGHTHYVKCVAFSLDGRYLV- 842

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT 433
                 D    ++ + ++G    LI  
Sbjct: 843 --SGGKDKMIAIWDL-ISGELSQLIQG 866



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 54/351 (15%), Positives = 117/351 (33%), Gaps = 46/351 (13%)

Query: 101 QDWNSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKI 154
           Q+W  L    +    +I     +L          RLWDV   K    ++       W   
Sbjct: 472 QEWRCLEGHQMAVESLIFSSDSKLLASAGRDKTIRLWDVTSGK---FQQVLEGHQDW--- 525

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                    ++++     F+    +++    S I   ++ +   D              +
Sbjct: 526 --------VKALS-----FDKNADYLAS--ASAINDKTIRIWSIDQRQQTQQLQGHRNSI 570

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               F  + + +  A  D+     + L D    +A K++    + + +   S++G+   I
Sbjct: 571 QAIAFCADDRYLISAASDN----TIRLWDRDTGKAIKQLKQHTNWVYSVACSADGRWVAI 626

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               D  + ++ + ++      L        S ++ PDS  ++  S       L V    
Sbjct: 627 GYN-DWTVRLWDI-IEQREVNCLEGHESAVSSVAFCPDSQHLISGS---WDGTLRVWDIL 681

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAI--GVMKKDGSQERLLVEDS 390
               KRI Q  E        SP G  +A   +      + I        GS+   +++  
Sbjct: 682 TGKCKRILQGHENWVSCVAVSPNGQWVASGSWDKTVCLWEITNNWPHFKGSKPTRILQGH 741

Query: 391 --NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
             +++   +SP  + +  S     D   +++ +  +G+    +    Y+ D
Sbjct: 742 LEDIEGVAFSPDSQLMASSSN---DKTIRIWEV-ASGQQVQQLEGHKYSVD 788



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 78/224 (34%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N +      D        S N+  +A     +     +YL D    +  +++      I
Sbjct: 346 FNTKIAHWEIDCPTSWGAVSENKNILALVWQQN-----IYLWDLNQGKLLRQLQGHSKKI 400

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               F+ +G   L+S   DE + I+ +         L+  +    + ++S D+    F +
Sbjct: 401 TDLAFNKDG-SLLLSGSLDETLIIWEIQ-TGRKRHELSEPMGRITAVAFSEDNQ---FIA 455

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + +  +    + R  +  + +    ++S    L+A    +G    I +     
Sbjct: 456 SGSHTGIVRIWGAISGQEWRCLEGHQMAVESLIFSSDSKLLA---SAGRDKTIRLWDVTS 512

Query: 381 SQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            + + ++E       A ++  +   L  S     D   +++SID
Sbjct: 513 GKFQQVLEGHQDWVKALSFDKNADYLA-SASAINDKTIRIWSID 555


>gi|116670739|ref|YP_831672.1| peptidase S9 prolyl oligopeptidase [Arthrobacter sp. FB24]
 gi|116610848|gb|ABK03572.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Arthrobacter sp. FB24]
          Length = 701

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 13/141 (9%)

Query: 259 MILAPRFSSNGKRALISVQKDEAM------DIYSVDLQ-SNATERLTNTLFINISASYSP 311
            + AP    +G RA++SV + +         +++V L       RLT   F + + ++SP
Sbjct: 26  SVSAPAVHPDGSRAVVSVIRPDFDADTYVGQLWTVPLDPEKLPRRLTRG-FRDTAPAFSP 84

Query: 312 DSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           D   + F  +  +GK QLYV+++ G + + ++  K        WSP    I F   + + 
Sbjct: 85  DGLVLAFLRATADGKPQLYVVEAAGGEPQVLTNAKLG-VSSFAWSPDSHSIVFGARTPDD 143

Query: 371 FAIGVMK---KDGSQERLLVE 388
              G +          RL+ +
Sbjct: 144 GRYGTLDGVSAGAEDARLITD 164



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 86/285 (30%), Gaps = 54/285 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-----DRAPKRIGNFRSMILAPRFSSN 268
           +  P   P+  +   +    +     Y+          ++ P+R+        AP FS +
Sbjct: 27  VSAPAVHPDGSRAVVSVIRPDFDADTYVGQLWTVPLDPEKLPRRLTRGFR-DTAPAFSPD 85

Query: 269 GKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           G          D    +Y V+      + LTN      S ++SPDS  IVF +      +
Sbjct: 86  GLVLAFLRATADGKPQLYVVEAAGGEPQVLTNAKLGVSSFAWSPDSHSIVFGARTPDDGR 145

Query: 328 LYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAF------------TKFSGEKFAI 373
              +   S G++  R+  D +       ++    L  +               +G     
Sbjct: 146 YGTLDGVSAGAEDARLITDFKYRMNGVGYTADKPLQLYVVEVPELDDEPPVAPAGRALRA 205

Query: 374 GVMKKDGSQ-------------------ERLLVEDSNLQAPTWSPSGRSLIFSR----KK 410
                +G+                     +L    ++    ++S  G S+ F        
Sbjct: 206 QKTVAEGTGREAGPAREADTAEALLPPARQLTFAAADHSGESFSTDGHSVYFVAALHEGS 265

Query: 411 DGDTGSKLYSIDLNG----------RNETLINTPAYASDPQWVGF 445
           D D  + +Y + + G               +     + + QW+ +
Sbjct: 266 DHDLETGVYRVPVVGGEPEPVRAANSGRQTVGAARQSRNGQWLFY 310



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/309 (10%), Positives = 99/309 (32%), Gaps = 59/309 (19%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +  +     +      L  +  D   +      R      P FSP+   +A+     +  
Sbjct: 41  VSVIRPDFDADTYVGQLWTVPLDPEKLPRRLT-RGFRDTAPAFSPDGLVLAFLRATADGK 99

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--- 293
            ++Y+++      P+ + N +  + +  +S +    +   +  +     ++D  S     
Sbjct: 100 PQLYVVE-AAGGEPQVLTNAKLGVSSFAWSPDSHSIVFGARTPDDGRYGTLDGVSAGAED 158

Query: 294 TERLTNTLF----------------------INISASYSPDSSQIVF---ESDREGKEQL 328
              +T+  +                      ++     +P    +      ++  G+E  
Sbjct: 159 ARLITDFKYRMNGVGYTADKPLQLYVVEVPELDDEPPVAPAGRALRAQKTVAEGTGREAG 218

Query: 329 YVMQSNGSD-----QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +++ ++      ++++    A +    +S  G  + F     E         +    
Sbjct: 219 PAREADTAEALLPPARQLTFAA-ADHSGESFSTDGHSVYFVAALHEGSD---HDLETGVY 274

Query: 384 RLLVEDSNLQAPTW-------------SPSGRSLIFSRKKDGDTG-------SKLYSIDL 423
           R+ V     +                 S +G+ L ++ ++ G++G       + LY +  
Sbjct: 275 RVPVVGGEPEPVRAANSGRQTVGAARQSRNGQWLFYTAQELGESGQDFVARNTALYVMPA 334

Query: 424 NGRNETLIN 432
            G + ++++
Sbjct: 335 GGGDASVLS 343



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 32/105 (30%), Gaps = 9/105 (8%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPS 400
           S   P   P G     +    +         +  +  D     R L       AP +SP 
Sbjct: 26  SVSAPAVHPDGSRAVVSVIRPDFDADTYVGQLWTVPLDPEKLPRRLTRGFRDTAPAFSPD 85

Query: 401 GRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQWVG 444
           G  L F R    D   +LY ++   G  + L N     S   W  
Sbjct: 86  GLVLAFLRATA-DGKPQLYVVEAAGGEPQVLTNAKLGVSSFAWSP 129


>gi|257389180|ref|YP_003178953.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halomicrobium mukohataei DSM 12286]
 gi|257171487|gb|ACV49246.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halomicrobium mukohataei DSM 12286]
          Length = 596

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 79/202 (39%), Gaps = 12/202 (5%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +R  N RS   A     +G +    +       +++VD      ++ T        ASYS
Sbjct: 5   ERYLNVRSATGA-TLGPDG-QLAFRMNATGTFQLWNVDEPGGWPQQRTFYEDSVSFASYS 62

Query: 311 PDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KF 366
           P+  +++F  D  G  + QL+ + ++G+    ++   +A +    WS  G+  AF   + 
Sbjct: 63  PERPELIFGKDEGGDERMQLFRLDADGT-ITSLTDSPDAKHRWGGWSHDGERFAFASNRR 121

Query: 367 SGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-N 424
               F I V  +D  +  L+ E D  L    WSP    L+   +   +    L+ +DL +
Sbjct: 122 DESVFDIYVQGRDDDEATLVHEGDGWLTVGGWSPDDTKLL-VGEAHSNVDQDLFVLDLES 180

Query: 425 GRNETLINTPAYASDPQ--WVG 444
           G  E L             W  
Sbjct: 181 GDFEHLTPHHGDVRYGSAQWAP 202



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 92/266 (34%), Gaps = 16/266 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G  +  L  +D DG  I  LT S D       +S + ++ A+A+   ++ +    +  R
Sbjct: 75  GGDERMQLFRLDADGT-ITSLTDSPDAKHRWGGWSHDGERFAFASNRRDESVFDIYVQGR 133

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFI- 303
            D     +      +    +S +  + L+     +   D++ +DL+S   E LT      
Sbjct: 134 DDDEATLVHEGDGWLTVGGWSPDDTKLLVGEAHSNVDQDLFVLDLESGDFEHLTPHHGDV 193

Query: 304 -NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              SA ++PD   +   +D +   +           + +  D + +            +A
Sbjct: 194 RYGSAQWAPDGDGVYLVTDSDADLRWLARLDLDETLREVVSDDDWNVDGVSVDVDTGRLA 253

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-------TWSPSGRSLIFSRKKDGDT- 414
           +++       + V +   + E  +      + P       +W P      F+    G T 
Sbjct: 254 YSRNVDGYTDLTVGRL--TDETTIETFPTPELPGGIAGGVSWGPDAER--FAVTVTGRTV 309

Query: 415 GSKLYSIDLNGRNETLINTPAYASDP 440
            + ++ ++      T     + A  P
Sbjct: 310 NTNVFVVETETGEATRWTHASTAGIP 335


>gi|115373641|ref|ZP_01460936.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|310824959|ref|YP_003957317.1| hypothetical protein STAUR_7735 [Stigmatella aurantiaca DW4/3-1]
 gi|115369344|gb|EAU68284.1| tetratricopeptide repeat family [Stigmatella aurantiaca DW4/3-1]
 gi|309398031|gb|ADO75490.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1196

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 5/162 (3%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R P R+          +   +GKR +    ++ A +IY+ DL+     RL +        
Sbjct: 32  RTPTRLTVGMGDHFLGQLEPDGKRLIFVSNRNIATEIYAQDLEGGRERRLFDEGADVTWP 91

Query: 308 SYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             SPD   +++ S R+    QL V     ++++R   D+E+S     W      +A    
Sbjct: 92  RISPDGKHLLYISFRDQAGGQLCVRTLPAAEERRCL-DEESSAVQAEW-IDASHVALVSR 149

Query: 367 SG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           +       +  +          + + NL +P  SP GR L++
Sbjct: 150 AAIQGDLHLSRVDVALKLSAKPLLERNLTSPALSPDGRWLVY 191



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 23/213 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ +++ + +  +     +Y  D    R  +R+ +  + +  PR S +GK  L    +D+
Sbjct: 51  PDGKRLIFVSNRN-IATEIYAQDLEGGRE-RRLFDEGADVTWPRISPDGKHLLYISFRDQ 108

Query: 281 -AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               +    L +    R  +     + A +  D+S +   S    +  L++ + + + + 
Sbjct: 109 AGGQLCVRTLPAAEERRCLDEESSAVQAEWI-DASHVALVSRAAIQGDLHLSRVDVALKL 167

Query: 340 RISQDKEASYFDPVWSPQGDLIAF------TKFSGEKF------AIGVMKKD--GSQERL 385
                 E +   P  SP G  + +          G  F       + V++ D  G+    
Sbjct: 168 SAKPLLERNLTSPALSPDGRWLVYVPIERAVPQVGPGFAARAARHLEVLRLDRPGAAPIP 227

Query: 386 LVED--SNLQAPTWSPSGRSLI---FSRKKDGD 413
           L  D       P ++  GRSL    F    +GD
Sbjct: 228 LTLDLPGQTGQPVFARDGRSLYVVQFFTDSNGD 260



 Score = 73.1 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 64/164 (39%), Gaps = 12/164 (7%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               RLT  +  +      PD  +++F S+R    ++Y     G  ++R+  D+ A    
Sbjct: 32  RTPTRLTVGMGDHFLGQLEPDGKRLIFVSNRNIATEIYAQDLEGGRERRL-FDEGADVTW 90

Query: 352 PVWSPQGDLIAFTKFS---GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           P  SP G  + +  F    G +  +  +     + R L E+S+     W      +    
Sbjct: 91  PRISPDGKHLLYISFRDQAGGQLCVRTLPAA-EERRCLDEESSAVQAEWI-DASHVALVS 148

Query: 409 KKDGDTGSKLYSID----LNGRN--ETLINTPAYASDPQWVGFM 446
           +        L  +D    L+ +   E  + +PA + D +W+ ++
Sbjct: 149 RAAIQGDLHLSRVDVALKLSAKPLLERNLTSPALSPDGRWLVYV 192



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 6/114 (5%)

Query: 334 NGS--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS- 390
           +G      R++      +F     P G  + F         I     +G +ER L ++  
Sbjct: 28  DGGLRTPTRLT-VGMGDHFLGQLEPDGKRLIFVSNRNIATEIYAQDLEGGRERRLFDEGA 86

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL-INTPAYASDPQWV 443
           ++  P  SP G+ L++   +D   G +L    L    E   ++  + A   +W+
Sbjct: 87  DVTWPRISPDGKHLLYISFRD-QAGGQLCVRTLPAAEERRCLDEESSAVQAEWI 139



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 79/244 (32%), Gaps = 38/244 (15%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R++FVS       I   +   D +G   R L      +   PR SP+ + + Y ++ D+ 
Sbjct: 55  RLIFVSNR----NIATEIYAQDLEGGRERRLFDEGADVT-WPRISPDGKHLLYISFRDQA 109

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSN- 292
             ++  + T      +R  +  S  +   +  +     +  +      + +  VD+    
Sbjct: 110 GGQL-CVRTLPAAEERRCLDEESSAVQAEW-IDASHVALVSRAAIQGDLHLSRVDVALKL 167

Query: 293 -----ATERLTNTLFINISASYSPDSSQIV--------------FESDREGKEQLYVMQS 333
                    LT       S + SPD   +V              F +      ++  +  
Sbjct: 168 SAKPLLERNLT-------SPALSPDGRWLVYVPIERAVPQVGPGFAARAARHLEVLRLDR 220

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSN 391
            G+    ++ D       PV++  G  +   +F  +     V+    S    R+      
Sbjct: 221 PGAAPIPLTLDLPGQTGQPVFARDGRSLYVVQFFTDSNGDEVIDASDSGVLFRVPFAAER 280

Query: 392 LQAP 395
             AP
Sbjct: 281 DDAP 284


>gi|239979381|ref|ZP_04701905.1| protease [Streptomyces albus J1074]
          Length = 1075

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 65/188 (34%), Gaps = 19/188 (10%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                 + D    ++   L      R++          +SPD + + + S R+G  +++V
Sbjct: 1   MVAFVAEDD----VWVAPLDGGRAWRVSADNMPVDHPRFSPDGTTVAWTSTRDGAPEVHV 56

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERLLV 387
             ++G   +R++           W+P G+++A T +            +  DG     L 
Sbjct: 57  APTDGGPSRRLTHWGSKRTSVRGWTPGGEVLALTTYGEASLRRSWARAVPLDGGPAPALP 116

Query: 388 EDSNLQAPTWSPSGRSL----------IFSRKKDGDTGSKLYSIDLNGRNETL-INTPAY 436
               +    + P G+ L           + ++  G T  KL++    G    L       
Sbjct: 117 FGP-VGGVAYGPDGQVLLGSVSMGREAAWWKRYRGGTAGKLWTGTEGGEFTRLHAGLDGN 175

Query: 437 ASDPQWVG 444
              P WVG
Sbjct: 176 IEYPLWVG 183



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 87/253 (34%), Gaps = 35/253 (13%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + V   DG    +   + +  +  PRFSP+   VA+ +  D     V++  T      +
Sbjct: 9   DVWVAPLDGGRA-WRVSADNMPVDHPRFSPDGTTVAWTSTRDG-APEVHVAPTD-GGPSR 65

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTNTLFINISA 307
           R+ ++ S   + R ++  G+   ++   +         +V L       L       +  
Sbjct: 66  RLTHWGSKRTSVRGWTPGGEVLALTTYGEASLRRSWARAVPLDGGPAPALPFGPVGGV-- 123

Query: 308 SYSPDSS-----------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +Y PD                ++  R G        + G +  R+    + +   P+W  
Sbjct: 124 AYGPDGQVLLGSVSMGREAAWWKRYRGGTAGKLWTGTEGGEFTRLHAGLDGNIEYPLWV- 182

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW-----SPSGRSLIFSRK 409
            GD IAF        A+     DG+  R      D +   P +     +  G  ++++  
Sbjct: 183 -GDRIAFLSDHEGVGALYSSLPDGTDLRRHTPLTDPDTGLPAFYARHAATDGTRVVYTA- 240

Query: 410 KDGDTGSKLYSID 422
                  +L+ +D
Sbjct: 241 -----AGRLWVLD 248



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 68/205 (33%), Gaps = 25/205 (12%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+      +  PRFS +G     +  +D A +++        + RLT+      S   ++
Sbjct: 22  RVSADNMPVDHPRFSPDGTTVAWTSTRDGAPEVHVAPTDGGPSRRLTHWGSKRTSVRGWT 81

Query: 311 PDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           P    +   +  E   +      +  +G     +            + P G ++  +   
Sbjct: 82  PGGEVLALTTYGEASLRRSWARAVPLDGGPAPALPFGPVGGV---AYGPDGQVLLGSVSM 138

Query: 368 GEKFAIGVMKKDGSQERLLVE-------------DSNLQAPTWSPSGRSLIFSRKKDGDT 414
           G + A     + G+  +L                D N++ P W   G  + F    +G  
Sbjct: 139 GREAAWWKRYRGGTAGKLWTGTEGGEFTRLHAGLDGNIEYPLWV--GDRIAFLSDHEG-- 194

Query: 415 GSKLYSIDLNGRNETLINTPAYASD 439
              LYS   +G +    +TP    D
Sbjct: 195 VGALYSSLPDGTDLRR-HTPLTDPD 218



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 75/252 (29%), Gaps = 26/252 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-IL 261
            R + P RD     P  +     V         +       T      + +     +   
Sbjct: 278 PRPVEPGRDLGGASPDHTGRGSAVT--------VRGAVHWVTHRSGPARLLSGEPGVRHR 329

Query: 262 APR-FSSNGK-RALISVQKDEAMDIYSVDL----QSNATERLTNT-LFINISASYSPDSS 314
            PR F  +G+         +    +           +   R+    L   +    +PD S
Sbjct: 330 LPRTFRVDGEEYVAWVTDAEGEDALEFAPATGTAAGSTPRRIAAGQLGRVLQLRMAPDGS 389

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +    S      ++ ++     + + + + ++      V+SP    +A++    E     
Sbjct: 390 RAAVASH---DGRVLLVDRETGEVREVDRSEDGDATGLVFSPDSSWLAWSHPGPEPLR-Q 445

Query: 375 VMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID---LNGRNE 428
           +   + +   +        N  +P ++  G+ L F  ++  D     +  D   L+    
Sbjct: 446 LKLANTTDLTVSEATPLRFNDHSPAFTLDGKHLAFLSERSFDPVYDDHVFDLAFLDSSRP 505

Query: 429 TLINTPAYASDP 440
            LI   A    P
Sbjct: 506 HLITLAATTPSP 517



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 58/158 (36%), Gaps = 11/158 (6%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           + D    + +V+++     ++ +       G+  R +   +   + + R +P+  + A A
Sbjct: 335 RVDGEEYVAWVTDAEGEDALEFAPATGTAAGSTPRRIAAGQLGRVLQLRMAPDGSRAAVA 394

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD----IY 285
           ++D     RV L+D       +   +         FS +      S    E +       
Sbjct: 395 SHDG----RVLLVDRETGEVREVDRSEDGDATGLVFSPDSSWLAWSHPGPEPLRQLKLAN 450

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           + DL  +    L    F + S +++ D   + F S+R 
Sbjct: 451 TTDLTVSEATPL---RFNDHSPAFTLDGKHLAFLSERS 485


>gi|229822426|ref|YP_002883952.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Beutenbergia cavernae DSM 12333]
 gi|229568339|gb|ACQ82190.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Beutenbergia cavernae DSM 12333]
          Length = 716

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 93/286 (32%), Gaps = 35/286 (12%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKV----------AYAT 230
             +     +  +  +  DG  +RY     D     PR FS     +            + 
Sbjct: 155 RRLRKARKEKKVAAILHDGYPVRYW--DHDLGPAFPRLFSVEGAPLPPEKPEDAEKVTSD 212

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDEA----- 281
            +              +R  + +       L+P      + +G   + S     A     
Sbjct: 213 AEGGSPSSTKDPGPDDERGTRDLTADARRALSPEAGFDLAPDGATIVASWAVPGAKGFVR 272

Query: 282 MDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQ------LYVMQSN 334
             +  +D+ +     + +    ++ A+  SPD +++ +  +            L+V   +
Sbjct: 273 SVLARIDVATGERTVIVDDAGADLGAAVISPDGTRVAYVRETISTPHDAPRVELWVAGID 332

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-----KDGSQERLLVED 389
           GS  +R+  D +       W P G  +  T   G    + V+         S  R L  D
Sbjct: 333 GSGARRLVSDWDRWAHPEAWLPDGSALLVTADDGGAAPVFVVPVGDPGAGASDVRRLTAD 392

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                   +P G +  F+ +   +  +++  + L+G   +++  P+
Sbjct: 393 GAFTNVVVAPDGSA-AFALRSSYEYPAEVVRVALDGSGVSVLPGPS 437



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 63/189 (33%), Gaps = 12/189 (6%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           ++      D  + +   +     G +++ L  +D        +       L     SP+ 
Sbjct: 246 EAGFDLAPDGATIVASWAVPGAKGFVRSVLARIDVATGERTVIVDDAGADLGAAVISPDG 305

Query: 224 QKVAYAT---YDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAP-RFSSNGKRALISVQK 278
            +VAY         D  RV L    ID +  +R+ +       P  +  +G   L++   
Sbjct: 306 TRVAYVRETISTPHDAPRVELWVAGIDGSGARRLVSDWDRWAHPEAWLPDGSALLVTADD 365

Query: 279 DEAMDIYSVDLQS-----NATERLTNTLFINISASYSPDSS-QIVFESDREGKEQLYVMQ 332
             A  ++ V +       +   RLT       +   +PD S      S  E   ++  + 
Sbjct: 366 GGAAPVFVVPVGDPGAGASDVRRLTADGAF-TNVVVAPDGSAAFALRSSYEYPAEVVRVA 424

Query: 333 SNGSDQKRI 341
            +GS    +
Sbjct: 425 LDGSGVSVL 433



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 58/219 (26%), Gaps = 33/219 (15%)

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
           PD       W   GA+  V   + +             DV   +    +      A    
Sbjct: 253 PDGATIVASWAVPGAKGFVRSVLAR------------IDVATGE----RTVIVDDAGADL 296

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
            A  IS D             +R+ +V  + S      +  L V   DG+  R L    D
Sbjct: 297 GAAVISPD------------GTRVAYVRETISTPHDAPRVELWVAGIDGSGARRLVSDWD 344

Query: 212 QILFEPRFSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           +      + P+   +     D     +  V + D     +  R             + +G
Sbjct: 345 RWAHPEAWLPDGSALLVTADDGGAAPVFVVPVGDPGAGASDVRRLTADGAFTNVVVAPDG 404

Query: 270 KRA-LISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
             A  +    +   ++  V L  +    L          
Sbjct: 405 SAAFALRSSYEYPAEVVRVALDGSGVSVLPGPSARPALP 443


>gi|89095982|ref|ZP_01168875.1| prolyl oligopeptidase family protein [Bacillus sp. NRRL B-14911]
 gi|89088836|gb|EAR67944.1| prolyl oligopeptidase family protein [Bacillus sp. NRRL B-14911]
          Length = 597

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 51/274 (18%), Positives = 94/274 (34%), Gaps = 18/274 (6%)

Query: 174 NSRILFVSESVVSGII----------KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
             RI+FVS    +G            K  L ++   G  IR LT S + I      SP+ 
Sbjct: 56  AERIMFVSFIQGTGKRIFGMDEGVNEKQQLFLLTETGEVIR-LTDSPEHIHKYGGVSPDG 114

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAM 282
           + +++A+    +      + +      K +          ++   G   LI  V  +   
Sbjct: 115 KWISWASNRRHNTYFDIYIQSLESFEVKMVFQGDGHFSPLQWHPEGNSLLIEQVNTNLDN 174

Query: 283 DIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQK 339
           D+  +DL     + LT         S ++S D   I   S+R+ +   L  +     + K
Sbjct: 175 DLGLLDLSGGTVQWLTKHEGEAAFASPAFSSDGKMIYMLSNRDREFMNLARLNLETLETK 234

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWS 398
            +  +KE    +   S     IAF+   G      ++  + ++          +   ++S
Sbjct: 235 WLV-EKEWDLEELKLSTDKKKIAFSINEGGVSKGALLDFESNEVTEWESPAGVITDFSFS 293

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           P    L F         S ++ +DL  R      
Sbjct: 294 PDNSRLAFILN-GPQHPSDIWELDLRSRKAKRAT 326



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 6/148 (4%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +   GK             ++ +  +     ++  T    +  S+   + + +F  D 
Sbjct: 18  PAYGPQGKMLNFISDASGIPQLWEIHAEGGNPNQVLETAERIMFVSFIQGTGKRIFGMDE 77

Query: 323 E--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMKK 378
               K+QL+++ +   +  R++   E  +     SP G  I  A  +     F I +   
Sbjct: 78  GVNEKQQLFLL-TETGEVIRLTDSPEHIHKYGGVSPDGKWISWASNRRHNTYFDIYIQSL 136

Query: 379 DGSQERLLVEDSNLQAP-TWSPSGRSLI 405
           +  + +++ +     +P  W P G SL+
Sbjct: 137 ESFEVKMVFQGDGHFSPLQWHPEGNSLL 164



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 99/257 (38%), Gaps = 19/257 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-----TRI 246
            L  +  +G N   +  + ++I+F        +++        +  +++L+       R+
Sbjct: 38  QLWEIHAEGGNPNQVLETAERIMFVSFIQGTGKRIFGMDEGVNEKQQLFLLTETGEVIRL 97

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFIN 304
             +P+ I  +         S +GK    +  +  +   DIY   L+S   + +       
Sbjct: 98  TDSPEHIHKYGG------VSPDGKWISWASNRRHNTYFDIYIQSLESFEVKMVFQGDGHF 151

Query: 305 ISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIA 362
               + P+ + ++  + +      L ++  +G   + ++  + EA++  P +S  G +I 
Sbjct: 152 SPLQWHPEGNSLLIEQVNTNLDNDLGLLDLSGGTVQWLTKHEGEAAFASPAFSSDGKMIY 211

Query: 363 FTKFSGEKF-AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                  +F  +  +  +  + + LVE + +L+    S   + + FS  + G +   L  
Sbjct: 212 MLSNRDREFMNLARLNLETLETKWLVEKEWDLEELKLSTDKKKIAFSINEGGVSKGAL-- 269

Query: 421 IDLNGRNETLINTPAYA 437
           +D      T   +PA  
Sbjct: 270 LDFESNEVTEWESPAGV 286



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 77/201 (38%), Gaps = 9/201 (4%)

Query: 200 GANIRYLTPSRDQILF-EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           G  +++LT    +  F  P FS + + +   +  D + + +  ++         +     
Sbjct: 183 GGTVQWLTKHEGEAAFASPAFSSDGKMIYMLSNRDREFMNLARLNLETLETKWLVEKEWD 242

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +    + S++ K+   S+ +        +D +SN      +   +    S+SPD+S++ F
Sbjct: 243 LEEL-KLSTDKKKIAFSINEGGVSKGALLDFESNEVTEWESPAGVITDFSFSPDNSRLAF 301

Query: 319 E-SDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             +  +    ++ +       KR +    +    + + +P  +LI+F  F G +      
Sbjct: 302 ILNGPQHPSDIWELDLRSRKAKRATFISHDPLVEEKLCAP--ELISFASFDGLEIPAFYY 359

Query: 377 KK---DGSQERLLVEDSNLQA 394
           K    DG    ++      ++
Sbjct: 360 KPKKADGKLPVVVFVHGGPES 380



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 53/142 (37%), Gaps = 3/142 (2%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-AFT 364
           + +Y P    + F SD  G  QL+ + + G +  ++ +  E   F       G  I    
Sbjct: 17  NPAYGPQGKMLNFISDASGIPQLWEIHAEGGNPNQVLETAERIMFVSFIQGTGKRIFGMD 76

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +   EK  + ++ + G   RL     ++      SP G+ + ++  +  +T   +Y   L
Sbjct: 77  EGVNEKQQLFLLTETGEVIRLTDSPEHIHKYGGVSPDGKWISWASNRRHNTYFDIYIQSL 136

Query: 424 NGRNETLINTPAYASDP-QWVG 444
                 ++        P QW  
Sbjct: 137 ESFEVKMVFQGDGHFSPLQWHP 158



 Score = 43.1 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 43/106 (40%), Gaps = 10/106 (9%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWS-PSGRSL 404
            +  +P + PQG ++ F   +     +  +  +G     ++E +  +   ++   +G+ +
Sbjct: 13  RNVKNPAYGPQGKMLNFISDASGIPQLWEIHAEGGNPNQVLETAERIMFVSFIQGTGKRI 72

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTP-------AYASDPQWV 443
            F   +  +   +L+ +   G    L ++P         + D +W+
Sbjct: 73  -FGMDEGVNEKQQLFLLTETGEVIRLTDSPEHIHKYGGVSPDGKWI 117


>gi|284040573|ref|YP_003390503.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
 gi|283819866|gb|ADB41704.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
          Length = 735

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 12/113 (10%)

Query: 264 RFSSNGKRALISV-----------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
             S +G+RA+ ++           + +    +Y   L+   ++ LT        A +SPD
Sbjct: 39  SLSPDGQRAVYALATIEPNPDNKEEYEYKTHVYLTGLKPGDSKALTRGPESARQAVWSPD 98

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             +I F    +GK Q+++M  +G +  +++     +   P+WSP G  I+FT 
Sbjct: 99  GQRIAFVRTVKGKGQIFIMPLDGGEAWQLTNTTYGA-STPLWSPDGTRISFTS 150



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 97/289 (33%), Gaps = 63/289 (21%)

Query: 220 SPNQQKVAYATYDDEDIL----------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           SP+ Q+  YA    E              VYL   +     K +           +S +G
Sbjct: 41  SPDGQRAVYALATIEPNPDNKEEYEYKTHVYLTGLKPGD-SKALTRGPESARQAVWSPDG 99

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +R            I+ + L      +LTNT +   +  +SPD ++I F S     + L 
Sbjct: 100 QRIAFVRTVKGKGQIFIMPLDGGEAWQLTNTTYGASTPLWSPDGTRISFTSGITMAQMLT 159

Query: 330 VMQSNGSDQKRISQDKEASYFDPVW---------SPQG----------------DLIAFT 364
               N      +   ++  + +  +         +P G                    F 
Sbjct: 160 DSLVNPGKNTPLWSLEKPGFANNNFIKSDKKVKPNPDGSLAEVRAYLEKDVDDKKAKVFN 219

Query: 365 KFSGEK----------FAIGVMK-KDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG 412
           + + +             + V+  K+G+  + L     + Q   W P+G+ L+    +D 
Sbjct: 220 RLNFQGEATTEPELSFTHMYVVDVKEGATPKALTRGFYSYQGGNWLPNGQGLLVVTDRDS 279

Query: 413 ------DTGSKLYSI--DLNGRNETLIN-------TPAYASDPQWVGFM 446
                 +  +++  I  D +G  + +++       +P+ + D + + FM
Sbjct: 280 LKHPDREQDNRIVYIPADGSGTQKAVLSEAGKSYRSPSVSPDGKQLVFM 328



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 13/113 (11%)

Query: 308 SYSPDSSQIVFES-----------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           S SPD  + V+             + E K  +Y+      D K +++  E S    VWSP
Sbjct: 39  SLSPDGQRAVYALATIEPNPDNKEEYEYKTHVYLTGLKPGDSKALTRGPE-SARQAVWSP 97

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSR 408
            G  IAF +    K  I +M  DG +   L   +     P WSP G  + F+ 
Sbjct: 98  DGQRIAFVRTVKGKGQIFIMPLDGGEAWQLTNTTYGASTPLWSPDGTRISFTS 150



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 90/271 (33%), Gaps = 50/271 (18%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ Q++A+         ++++M      A + + N       P +S +G R   +   
Sbjct: 95  WSPDGQRIAFVRTVKGKG-QIFIMPLDGGEAWQ-LTNTTYGASTPLWSPDGTRISFTSGI 152

Query: 279 DEAMDIYSVDLQSNATERL--------TNTLFI--NISASYSPDSS-------------- 314
             A  +    +       L         N  FI  +     +PD S              
Sbjct: 153 TMAQMLTDSLVNPGKNTPLWSLEKPGFANNNFIKSDKKVKPNPDGSLAEVRAYLEKDVDD 212

Query: 315 -------QIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LI 361
                  ++ F+ +   +       +YV+        +       SY    W P G  L+
Sbjct: 213 KKAKVFNRLNFQGEATTEPELSFTHMYVVDVKEGATPKALTRGFYSYQGGNWLPNGQGLL 272

Query: 362 AFTKFSGEKF-------AIGVMKKDGSQER--LLVEDS-NLQAPTWSPSGRSLIFS-RKK 410
             T     K         I  +  DGS  +  +L E   + ++P+ SP G+ L+F     
Sbjct: 273 VVTDRDSLKHPDREQDNRIVYIPADGSGTQKAVLSEAGKSYRSPSVSPDGKQLVFMVSPS 332

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +G    +L    LNG + + +    +   P 
Sbjct: 333 EGVNFPQLGLATLNGTSVSGVELVTFDRAPS 363



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 81/218 (37%), Gaps = 27/218 (12%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--------EAMDIYSVDLQS 291
           Y++D +    PK +           +  NG+  L+   +D        +   I  +    
Sbjct: 239 YVVDVKEGATPKALTRGFYSYQGGNWLPNGQGLLVVTDRDSLKHPDREQDNRIVYIPADG 298

Query: 292 NATER--LTNTLFINISASYSPDSSQIVF-ESDREGK--EQLYVMQSNG---SDQKRISQ 343
           + T++  L+       S S SPD  Q+VF  S  EG    QL +   NG   S  + ++ 
Sbjct: 299 SGTQKAVLSEAGKSYRSPSVSPDGKQLVFMVSPSEGVNFPQLGLATLNGTSVSGVELVTF 358

Query: 344 DKEAS---YFDPVWSPQGDL------IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           D+  S   +     S +G        I F   +     +  +     Q   L  D     
Sbjct: 359 DRAPSSMAWTTAPISAKGKKGTAGYVIYFNASANGGSPLYRLDPATKQVTQLT-DFTAGV 417

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            ++  SG  ++ ++ +  +  S+LY  D   + +T ++
Sbjct: 418 TSFDVSGNRVVLAKTEVANP-SELYLTDAAAKTQTKLS 454



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 67/222 (30%), Gaps = 30/222 (13%)

Query: 193 LCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--------DILRVYLMD 243
           + V+D  +GA  + LT           + PN Q +   T  D         D   VY+  
Sbjct: 238 MYVVDVKEGATPKALTRGFYSYQGG-NWLPNGQGLLVVTDRDSLKHPDREQDNRIVYIPA 296

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------NATERL 297
                    +        +P  S +GK+ +  V   E ++   + L +      +  E +
Sbjct: 297 DGSGTQKAVLSEAGKSYRSPSVSPDGKQLVFMVSPSEGVNFPQLGLATLNGTSVSGVELV 356

Query: 298 TNTLFIN----ISASYSPDSSQ------IVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           T     +     +A  S    +      I F +   G   LY +        +++ D  A
Sbjct: 357 TFDRAPSSMAWTTAPISAKGKKGTAGYVIYFNASANGGSPLYRLDPATKQVTQLT-DFTA 415

Query: 348 SYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVE 388
                  S  G+ +   K        + +       +  L  
Sbjct: 416 GVTSFDVS--GNRVVLAKTEVANPSELYLTDAAAKTQTKLSN 455



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 20/122 (16%)

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFSGEKF----AIGVMKKDGSQER 384
           +D  RI Q    S      SP G    +          + E++     + +        +
Sbjct: 27  TDLTRIKQVGGISL-----SPDGQRAVYALATIEPNPDNKEEYEYKTHVYLTGLKPGDSK 81

Query: 385 LLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQW 442
            L     + +   WSP G+ + F R   G    +++ + L+G     L NT   AS P W
Sbjct: 82  ALTRGPESARQAVWSPDGQRIAFVRTVKGKG--QIFIMPLDGGEAWQLTNTTYGASTPLW 139

Query: 443 VG 444
             
Sbjct: 140 SP 141


>gi|326515644|dbj|BAK07068.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 733

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 88/234 (37%), Gaps = 45/234 (19%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS--NGKRAL 273
            P  S +  K+A+   + + +        R     +      + I +  ++   +     
Sbjct: 416 FPTTSKDGSKLAFVDNNFKAVWLADSHGIRRVYEMR----GTNSIFSTSWNKNQDRDTLY 471

Query: 274 I----SVQKDEAMDIYSV-----DLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +    S    + ++IY++            ERLT+  F N   S +PD ++ VF S R+G
Sbjct: 472 VCIGPSFSAGKPLEIYAISNVSGPRGGRKVERLTDGHFNNAFPSSNPDGTKFVFRSTRDG 531

Query: 325 K----EQLYVM------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
                + LY+M      + +    +R++ +   +     WSP+ D I F+          
Sbjct: 532 GAELHKNLYIMEDAEVGEFSEGTVRRLT-NGPWTDTHCSWSPKNDWIVFSSSRDKAAGAP 590

Query: 369 -------EKFAIG-VMKKDGSQERLLVED-----SNLQAPTWSPSGRSLIFSRK 409
                    FA+  VM  D +    +++       ++  P +SP  RS++ +  
Sbjct: 591 KRDILDPGSFAVFMVMASDPTVVVRVMKSSDSVAGHVTHPMFSPDMRSIVVAAD 644



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 69/189 (36%), Gaps = 31/189 (16%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISA 307
           +G FR   + P  S +G +        +A+ +      S+   R+     TN++F + S 
Sbjct: 407 VGLFRVSGVFPTTSKDGSKLAFVDNNFKAVWL----ADSHGIRRVYEMRGTNSIF-STSW 461

Query: 308 SYSPDSSQIVFE---SDREGKE-QLYVM-----QSNGSDQKRISQDKEASYFDPVWSPQG 358
           + + D   +      S   GK  ++Y +        G   +R++     + F P  +P G
Sbjct: 462 NKNQDRDTLYVCIGPSFSAGKPLEIYAISNVSGPRGGRKVERLTDGHFNNAF-PSSNPDG 520

Query: 359 DLIAFTKFSGEKF----AIGVMK-------KDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
               F             + +M+        +G+  RL          +WSP    ++FS
Sbjct: 521 TKFVFRSTRDGGAELHKNLYIMEDAEVGEFSEGTVRRLTNGPWTDTHCSWSPKNDWIVFS 580

Query: 408 RKKDGDTGS 416
             +D   G+
Sbjct: 581 SSRDKAAGA 589



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 36/148 (24%), Gaps = 26/148 (17%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID--------RAPK 251
           G                P  +P+  K  + +  D        +    D           +
Sbjct: 497 GGRKVERLTDGHFNNAFPSSNPDGTKFVFRSTRDGGAELHKNLYIMEDAEVGEFSEGTVR 556

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQS-----------NATERL 297
           R+ N         +S      + S  +D    A     +D  S               R+
Sbjct: 557 RLTNGPWTDTHCSWSPKNDWIVFSSSRDKAAGAPKRDILDPGSFAVFMVMASDPTVVVRV 616

Query: 298 TNTL----FINISASYSPDSSQIVFESD 321
             +            +SPD   IV  +D
Sbjct: 617 MKSSDSVAGHVTHPMFSPDMRSIVVAAD 644



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 37/141 (26%), Gaps = 22/141 (15%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD-----DEDILRVYLMDTR 245
             L + D  GA+        D       F      + Y +             V    + 
Sbjct: 120 KVLRLADVYGADAFGGVRMEDSGCVAGGFDGVGHSLVYVSTKEPAKKRRAPWTVVYKTSL 179

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA---------MDIYSVDLQ---SNA 293
            D   +R+       L+P  S +GK   ++  +             DI  +++       
Sbjct: 180 ADGKTERLTPPDQYDLSPAVSPSGKMVAVANFRWNQWTGEIEHLKTDIVVMNVDRWAQGG 239

Query: 294 TER--LTNTLFINISASYSPD 312
             R  L          ++  D
Sbjct: 240 LRRKILIRDGGW---PTWGSD 257



 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 46/135 (34%), Gaps = 22/135 (16%)

Query: 269 GKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           G   +    K+ A         +Y   L    TERLT     ++S + SP    +   + 
Sbjct: 152 GHSLVYVSTKEPAKKRRAPWTVVYKTSLADGKTERLTPPDQYDLSPAVSPSGKMVAVANF 211

Query: 322 REG---------KEQLYVMQSN---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           R           K  + VM  +       +R    ++  +  P W    ++I F +   +
Sbjct: 212 RWNQWTGEIEHLKTDIVVMNVDRWAQGGLRRKILIRDGGW--PTWGSD-NIIFFHRGVDK 268

Query: 370 KFAIGVMKKDGSQER 384
               G+++ D    R
Sbjct: 269 MLPSGMVQTDWGVFR 283


>gi|188574727|ref|YP_001911656.1| dipeptidyl peptidase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188519179|gb|ACD57124.1| dipeptidyl peptidase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 786

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 17/214 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATE---RLT 298
            + +RA +   N      A  +S +G+   + ++  +  D +   VDL +   +   RL+
Sbjct: 319 LKGNRAVRVESNGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDLDNAKLQPRHRLS 378

Query: 299 NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++ +IN   +   + PD+  +   S+  G  QLY M+ N   ++R     +     PV S
Sbjct: 379 DSAWINWDFNDFGWLPDNRTLWLLSEESGYSQLYTMEGNSKPRQR--TRGKWEVSMPVPS 436

Query: 356 PQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  + F         + +  +     Q   +   + ++  + SP+G+ L+        
Sbjct: 437 ADGSGMFFLCNQKWPGDYEVCKLDLRNDQLTEVTALNGVEGFSLSPNGQQLL-VSYSGSY 495

Query: 414 TGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
             ++L  +   G   T++    TPA+ + P W+ 
Sbjct: 496 LPTQLAVVPATGGQATVLTDTRTPAFKAQP-WIA 528



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 16/142 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--S 258
           A+  ++ PS DQ      +  + ++V Y        +R     +      +R+ +     
Sbjct: 28  ADPDWIGPSVDQA----WWQWDGKQVQYLLKRAGSPVRDTYRQSTAGGTAERVADTARAG 83

Query: 259 MILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +  A P + +  +R L +   D    I+  DL+S A  +LT +  I     ++ D   I 
Sbjct: 84  LDAANPSYDATRQRMLFARNGD----IFLRDLRSGALTQLTRSNEIESRPQFASDGGAIW 139

Query: 318 FESDREGKEQLYVMQSNGSDQK 339
               R G    Y  +++G   +
Sbjct: 140 ----RAGNN-WYHWRADGGTAQ 156



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 61/191 (31%), Gaps = 17/191 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-------PNQQKV 226
           + R + V    V    +    +   D  N +     R        +        P+ + +
Sbjct: 343 DGRNVAVEIRAVDNKDR---WIASVDLDNAKLQPRHRLSDSAWINWDFNDFGWLPDNRTL 399

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDI 284
              + +        L     +  P++    +  +  P  S++G        +      ++
Sbjct: 400 WLLSEESG---YSQLYTMEGNSKPRQRTRGKWEVSMPVPSADGSGMFFLCNQKWPGDYEV 456

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQ 343
             +DL+++    +T    +    S SP+  Q++          QL V+ + G     ++ 
Sbjct: 457 CKLDLRNDQLTEVTALNGVEGF-SLSPNGQQLLVSYSGSYLPTQLAVVPATGGQATVLTD 515

Query: 344 DKEASYFDPVW 354
            +  ++    W
Sbjct: 516 TRTPAFKAQPW 526


>gi|17227934|ref|NP_484482.1| WD-40 repeat-containing serine/threonin protein kinase [Nostoc sp.
           PCC 7120]
 gi|17129783|dbj|BAB72396.1| serine/threonine kinase with WD-40 repeat [Nostoc sp. PCC 7120]
          Length = 677

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 76/229 (33%), Gaps = 19/229 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +        D   + + + +  +  + I      +     S NGK  + S   
Sbjct: 444 FSPDGKTLV----SGGDDNTIKIWNLKTGKVIRTITGHSDAVHTLAISPNGKTLV-SGSD 498

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + +++++        LT   F   S + SPD   I   S     + + +        
Sbjct: 499 DNTVKVWNLN-TGRLINTLTGHTFWVRSVAISPDGVNIASGSF---DKTVKIWNLETGTL 554

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                    +     ++P G+ +A          I  +        L      + +  +S
Sbjct: 555 THTLAGNGETVTSIAFNPDGNTLASASRD-RTIKIWKVGAGTRVRTLKGSTETITSIAFS 613

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQ 441
           P G +L  + +   D   KL++++      TL      + T A+  D  
Sbjct: 614 PDGNTLASASR---DQTIKLWNLETGKEIRTLEGHENTVTTVAFTPDGA 659



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 73/226 (32%), Gaps = 15/226 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             P  +        SPN Q +A    D      + +           +      + A  F
Sbjct: 389 TLPDDENAFVSLAISPNGQIIASCGSDR----TIKIWQLATGEDISSLKGHSRKVNAVVF 444

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREG 324
           S +GK  + S   D  + I+  +L++    R +T       + + SP+   +V  SD   
Sbjct: 445 SPDGKTLV-SGGDDNTIKIW--NLKTGKVIRTITGHSDAVHTLAISPNGKTLVSGSD--- 498

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + V   N                    SP G  IA   F  +   I  ++       
Sbjct: 499 DNTVKVWNLNTGRLINTLTGHTFWVRSVAISPDGVNIASGSFD-KTVKIWNLETGTLTHT 557

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           L      + +  ++P G +L  + +   D   K++ +    R  TL
Sbjct: 558 LAGNGETVTSIAFNPDGNTLASASR---DRTIKIWKVGAGTRVRTL 600



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 64/163 (39%), Gaps = 12/163 (7%)

Query: 173 FNSRILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           F  R + +S   V   SG    ++ + + +   + +      + +    F+P+   +A A
Sbjct: 521 FWVRSVAISPDGVNIASGSFDKTVKIWNLETGTLTHTLAGNGETVTSIAFNPDGNTLASA 580

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D      + +         + +      I +  FS +G     S  +D+ + ++  +L
Sbjct: 581 SRDR----TIKIWKVGAGTRVRTLKGSTETITSIAFSPDGNTLA-SASRDQTIKLW--NL 633

Query: 290 QSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           ++    R L        + +++PD + +V  S  +   +++ +
Sbjct: 634 ETGKEIRTLEGHENTVTTVAFTPDGANLVSGSG-DNTMRIWRI 675


>gi|229819307|ref|YP_002880833.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Beutenbergia cavernae DSM 12333]
 gi|229565220|gb|ACQ79071.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Beutenbergia cavernae DSM 12333]
          Length = 719

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 70/236 (29%), Gaps = 66/236 (27%)

Query: 263 PRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P    +G  A +++ + +         ++ V     A  RLT     +     SPD   +
Sbjct: 15  PSVHPDGGWAAVAISRPDLDDDAYRSQVWRVPTDGGAPVRLTGGDS-DSEPVISPDGRWL 73

Query: 317 VFESDREGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            F   R GK+   QL ++   G + + ++  +      P WSP    IA+T    E    
Sbjct: 74  AFL--RAGKDAPAQLALLDLLGGEARVLTDHRIGVGSRPAWSPDSRRIAYTARVPEPGRY 131

Query: 374 GVMKKDGSQ------------------------------------------------ERL 385
           G     G+                                                  RL
Sbjct: 132 GTKDGVGAGAESPRHITTYTYRIDNVGFTTGRPAHVFVLEVLDAPSPTDADARDVVPVRL 191

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              D +   P W+P G +L+  R +D      L  +            PA+  DP 
Sbjct: 192 TEGDLSHGLPVWAPDGGALLTVRSRDDALRGDLLRV------AVPAQLPAHEKDPA 241



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 68/205 (33%), Gaps = 7/205 (3%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G + + +      +     ++ +  +  DG     LT        EP  SP+ + +A
Sbjct: 18  HPDGGWAA-VAISRPDLDDDAYRSQVWRVPTDGGAPVRLTGGDS--DSEPVISPDGRWLA 74

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +     +   ++ L+D     A     +   +   P +S + +R   + +  E     + 
Sbjct: 75  FLRAGKDAPAQLALLDLLGGEARVLTDHRIGVGSRPAWSPDSRRIAYTARVPEPGRYGTK 134

Query: 288 DLQSNA---TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           D           +T   +   +  ++      VF  +           +      R++ +
Sbjct: 135 DGVGAGAESPRHITTYTYRIDNVGFTTGRPAHVFVLEVLDAPSPTDADARDVVPVRLT-E 193

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGE 369
            + S+  PVW+P G  +   +   +
Sbjct: 194 GDLSHGLPVWAPDGGALLTVRSRDD 218



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 33/103 (32%), Gaps = 9/103 (8%)

Query: 350 FDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             P   P G   A      +      +  +  +  DG     L    +   P  SP GR 
Sbjct: 13  GRPSVHPDGGWAAVAISRPDLDDDAYRSQVWRVPTDGGAPVRLTGGDSDSEPVISPDGRW 72

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYASDPQWVG 444
           L F R    D  ++L  +DL G    ++        S P W  
Sbjct: 73  LAFLR-AGKDAPAQLALLDLLGGEARVLTDHRIGVGSRPAWSP 114


>gi|302836445|ref|XP_002949783.1| hypothetical protein VOLCADRAFT_90161 [Volvox carteri f.
           nagariensis]
 gi|300265142|gb|EFJ49335.1| hypothetical protein VOLCADRAFT_90161 [Volvox carteri f.
           nagariensis]
          Length = 479

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 88/267 (32%), Gaps = 18/267 (6%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S ++VSG       + +        +       +    +SP+ +++   T  +E  +RV+
Sbjct: 210 SRTLVSGGADKQTLLWEASSGRCMNMLRGHRHEICALGYSPDGRRL--TTVGEEGTVRVW 267

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +      P  I      + +  +  +    L++  ++  + +++V L   A ERL   
Sbjct: 268 HAE-DPQYEPPLILPGDGSLTSMSWYPD-NYHLLTCSRERVLRVWNVWL--GARERLLRL 323

Query: 301 LFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                     SPD  ++           ++V++    +     Q    +     WSP G 
Sbjct: 324 PDNVGFHLRLSPDGYKLAAS---GSPPIVWVLKETTGEPLLSMQGHADTVTSLAWSPDGR 380

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSK 417
            +A T          V      Q R++       + A  WSP GR L        D   +
Sbjct: 381 FLATTSRDKTA---RVWDVATGQCRIIFAGHTEFVTAACWSPDGRQLATGSD---DKTLR 434

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           ++ +       TL       +   W  
Sbjct: 435 VWDLGSGVCRRTLSGHAGAVTSVAWSP 461



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 65/219 (29%), Gaps = 19/219 (8%)

Query: 192 SLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           ++ V    D      L    D  L    + P+     Y          + + +  +    
Sbjct: 263 TVRVWHAEDPQYEPPLILPGDGSLTSMSWYPDN----YHLLTCSRERVLRVWNVWLGARE 318

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISAS 308
           + +    ++    R S +G +   S     +  I  V  ++     L+         S +
Sbjct: 319 RLLRLPDNVGFHLRLSPDGYKLAAS----GSPPIVWVLKETTGEPLLSMQGHADTVTSLA 374

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +   S R+   +++         + I            WSP G  +A      
Sbjct: 375 WSPDGRFLATTS-RDKTARVW--DVATGQCRIIFAGHTEFVTAACWSPDGRQLATGSDDK 431

Query: 369 EKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
               + V        R  +      + +  WSP GR + 
Sbjct: 432 T---LRVWDLGSGVCRRTLSGHAGAVTSVAWSPDGRHVA 467



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 10/88 (11%), Positives = 30/88 (34%), Gaps = 4/88 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     +  V D      R +     + +    +SP+ +++A  + D      + + D  
Sbjct: 384 TTSRDKTARVWDVATGQCRIIFAGHTEFVTAACWSPDGRQLATGSDDK----TLRVWDLG 439

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                + +      + +  +S +G+   
Sbjct: 440 SGVCRRTLSGHAGAVTSVAWSPDGRHVA 467



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 44/130 (33%), Gaps = 7/130 (5%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +S DS  +V        +Q  + +++      + +          +SP G  +      G
Sbjct: 206 WSSDSRTLV---SGGADKQTLLWEASSGRCMNMLRGHRHEICALGYSPDGRRLTTVGEEG 262

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                           +L  D +L + +W P    L+   +   +   +++++ L G  E
Sbjct: 263 TVRVWHAEDPQYEPPLILPGDGSLTSMSWYPDNYHLLTCSR---ERVLRVWNVWL-GARE 318

Query: 429 TLINTPAYAS 438
            L+  P    
Sbjct: 319 RLLRLPDNVG 328


>gi|172037101|ref|YP_001803602.1| WD-40 repeat-containing protein [Cyanothece sp. ATCC 51142]
 gi|171698555|gb|ACB51536.1| WD-40 repeat protein [Cyanothece sp. ATCC 51142]
          Length = 1750

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 85/241 (35%), Gaps = 25/241 (10%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             S      L  +  D   +          +F   FSP+ Q +   + D      + L + 
Sbjct: 1500 SSDDRTIKLWNLHGD---LLETFRGHQDSVFAVAFSPDGQYIISGSNDR----TIKLWNL 1552

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              D      G+   +  A  FS +G+   IS   D  + ++  +LQ +  +     +F  
Sbjct: 1553 HGDLLETFRGHQDGI-FAVAFSPDGQYI-ISGSNDRTIKLW--NLQGDLLKTFEGHVFYI 1608

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S  ++PD   I   S     + + +    G     + +  +      V+SP G  IA  
Sbjct: 1609 SSLRFNPDGQTIASAS---ADKTIKLWNLQGD----LLETFDDDVNSIVFSPDGQTIASA 1661

Query: 365  KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                    I +    G    +      ++ A  +SP G+++        D   KL+S+DL
Sbjct: 1662 SADKT---IKLWNLQGDLLEIFQGHQDSIFAVAFSPDGQTIA---SISADNTIKLWSLDL 1715

Query: 424  N 424
            +
Sbjct: 1716 D 1716



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 78/223 (34%), Gaps = 28/223 (12%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILA 262
                    +    FS + Q +  ++ D      + L +   D     +  FR     + A
Sbjct: 1477 TFRGHQDGVLAVAFSHDSQYIVSSSDDR----TIKLWNLHGD----LLETFRGHQDSVFA 1528

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              FS +G+   IS   D  + ++  +L  +  E          + ++SPD   I+  S+ 
Sbjct: 1529 VAFSPDGQYI-ISGSNDRTIKLW--NLHGDLLETFRGHQDGIFAVAFSPDGQYIISGSN- 1584

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 + +    G   K  + +    Y     ++P G  IA          I +    G 
Sbjct: 1585 --DRTIKLWNLQGDLLK--TFEGHVFYISSLRFNPDGQTIASASADKT---IKLWNLQGD 1637

Query: 382  QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               L   D ++ +  +SP G+++        D   KL+++  +
Sbjct: 1638 L--LETFDDDVNSIVFSPDGQTIA---SASADKTIKLWNLQGD 1675



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 90/242 (37%), Gaps = 25/242 (10%)

Query: 143  KFFSSPASWR--KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
            ++  S +  R  K+ +   D +      +   F        + ++SG    ++ + +  G
Sbjct: 1495 QYIVSSSDDRTIKLWNLHGDLLETFRGHQDSVFAVAFSPDGQYIISGSNDRTIKLWNLHG 1554

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++          +F   FSP+ Q +   + D      + L + + D     +  F   +
Sbjct: 1555 -DLLETFRGHQDGIFAVAFSPDGQYIISGSNDR----TIKLWNLQGD----LLKTFEGHV 1605

Query: 261  L---APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                + RF+ +G+    S   D+ + ++  +LQ +  E  T    +N S  +SPD   I 
Sbjct: 1606 FYISSLRFNPDGQTIA-SASADKTIKLW--NLQGDLLE--TFDDDVN-SIVFSPDGQTIA 1659

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              S     + + +    G D   I Q  + S F   +SP G  IA    +     +  + 
Sbjct: 1660 SAS---ADKTIKLWNLQG-DLLEIFQGHQDSIFAVAFSPDGQTIASIS-ADNTIKLWSLD 1714

Query: 378  KD 379
             D
Sbjct: 1715 LD 1716



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 69/227 (30%), Gaps = 26/227 (11%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                +       FSPN + +A       DI  + + + +            S I    FS
Sbjct: 1102 LEGHEYDELGITFSPNGEIIASY-----DIKTIRIWNFKGKLLTTIKAGHTSWIDQVVFS 1156

Query: 267  SNGKRA-------LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             NG+           +  +D  + ++  +L+      L           +SPD   I   
Sbjct: 1157 PNGQIVASASSLASATTGQDGTIKLW--NLKGKLLHTLNGHGRWVNQVVFSPDGQTIA-S 1213

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               +G  +L+     G          + +     +SP G  I      G    + +    
Sbjct: 1214 GGWDGTVKLW--NLKGDLLHTFEGQFDGAASSVAFSPDGQTIV---SGGSDGTVKLWNLR 1268

Query: 380  GSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            G     L      +     +SPSG  +  S     D   KL+++  +
Sbjct: 1269 GDLLNTL-NGHEFEINRILFSPSGELIASSSY---DKTIKLWNLKGD 1311



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 105/305 (34%), Gaps = 34/305 (11%)

Query: 109  QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
              LVTG    +   R++  F   D K + ++IGK   +     R+         +  + G
Sbjct: 1058 DALVTG---LKAGRRIKNSFFGVDNKIKIKLIGK-LQNIFYQIRE---------FNRLEG 1104

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             + D        +  +++     ++ + +  G  +  +       + +  FSPN Q VA 
Sbjct: 1105 HEYDELGITFSPNGEIIASYDIKTIRIWNFKGKLLTTIKAGHTSWIDQVVFSPNGQIVAS 1164

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIY 285
            A+                +   K +         +    FS +G+    S   D  + ++
Sbjct: 1165 ASSLASATTGQDGTIKLWNLKGKLLHTLNGHGRWVNQVVFSPDGQTIA-SGGWDGTVKLW 1223

Query: 286  SVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
              +L+ +     T     + +AS   +SPD   IV      G +    + +   D     
Sbjct: 1224 --NLKGDLLH--TFEGQFDGAASSVAFSPDGQTIV----SGGSDGTVKLWNLRGDLLNTL 1275

Query: 343  QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPS 400
               E      ++SP G+LIA + +      I +    G       E      +   +SP+
Sbjct: 1276 NGHEFEINRILFSPSGELIASSSYDKT---IKLWNLKG-DLIHTFEGHKDVVENIMFSPN 1331

Query: 401  GRSLI 405
             + ++
Sbjct: 1332 SQFIV 1336



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 82/231 (35%), Gaps = 27/231 (11%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +      + + +  FSP+ Q +A   +D      V L + + D      G F     +  
Sbjct: 1190 HTLNGHGRWVNQVVFSPDGQTIASGGWDG----TVKLWNLKGDLLHTFEGQFDGAASSVA 1245

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS +G+  + S   D  + ++  +L+ +    L    F      +SP    I   S    
Sbjct: 1246 FSPDGQTIV-SGGSDGTVKLW--NLRGDLLNTLNGHEFEINRILFSPSGELIASSSY--- 1299

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--- 381
             + + +    G D     +  +    + ++SP    I     S +   I + K  G    
Sbjct: 1300 DKTIKLWNLKG-DLIHTFEGHKDVVENIMFSPNSQFIV----SSDSEDIKLWKLGGKLVH 1354

Query: 382  --QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD------TGSKLYSIDLN 424
              + + L + S      ++ +G+ +  S   DG        G  +Y++  N
Sbjct: 1355 TIKGKKLFQTSGGHKVLFNSNGKIIA-SSGIDGTVKLWNLMGELIYTLPGN 1404



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 81/207 (39%), Gaps = 17/207 (8%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             F PN   VA  + D +DI R +     +    K++ +    +    FSS+        +
Sbjct: 1407 TFHPNGLIVA--SSDAKDI-RFWNFSEELLHTSKKLTDDIGEV---AFSSDSSLITSFGR 1460

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             DE + ++  +L  +  E         ++ ++S DS  IV  SD      + +   +G D
Sbjct: 1461 FDEVIKLW--NLHGDLLETFRGHQDGVLAVAFSHDSQYIVSSSD---DRTIKLWNLHG-D 1514

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 +  + S F   +SP G  I  +  +     +  +  D  +     +D  + A  +
Sbjct: 1515 LLETFRGHQDSVFAVAFSPDGQYII-SGSNDRTIKLWNLHGDLLETFRGHQDG-IFAVAF 1572

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            SP G+ +I       D   KL+++  +
Sbjct: 1573 SPDGQYII---SGSNDRTIKLWNLQGD 1596



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 84/237 (35%), Gaps = 24/237 (10%)

Query: 170  KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             G + ++++F    +++ SG    ++ + +  G  +       D       FSP+ Q + 
Sbjct: 1195 HGRWVNQVVFSPDGQTIASGGWDGTVKLWNLKGDLLHTFEGQFDGAASSVAFSPDGQTIV 1254

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                       V L + R D      G+   +     FS +G+    S   D+ + ++  
Sbjct: 1255 ----SGGSDGTVKLWNLRGDLLNTLNGHEFEINRI-LFSPSGELIA-SSSYDKTIKLW-- 1306

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +L+ +          +  +  +SP+S  IV  SD E    + + +  G     I   K  
Sbjct: 1307 NLKGDLIHTFEGHKDVVENIMFSPNSQFIV-SSDSE---DIKLWKLGGKLVHTIKGKKLF 1362

Query: 348  SYFDPV---WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                     ++  G +IA +   G      +M      E +     N    T+ P+G
Sbjct: 1363 QTSGGHKVLFNSNGKIIASSGIDGTVKLWNLM-----GELIYTLPGNN--VTFHPNG 1412



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 61/365 (16%), Positives = 113/365 (30%), Gaps = 49/365 (13%)

Query: 72   DLQRS--DVF----NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR 125
            DL  +    F    + ++     Q I +  S    + WN  G  +L              
Sbjct: 1228 DLLHTFEGQFDGAASSVAFSPDGQTIVSGGSDGTVKLWNLRG-DLL-----NTLNGHEFE 1281

Query: 126  VEFRLWDVKDRKQIIGKKFFSSPASWR---KIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            +   L+     + I    +  +   W     + HT           E   F+    F+  
Sbjct: 1282 INRILFSP-SGELIASSSYDKTIKLWNLKGDLIHTFE---GHKDVVENIMFSPNSQFIVS 1337

Query: 183  SVVSGIIKNSLC---VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            S    I    L    V    G  +   +     +     F+ N + +A +  D      V
Sbjct: 1338 SDSEDIKLWKLGGKLVHTIKGKKLFQTSGGHKVL-----FNSNGKIIASSGIDG----TV 1388

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             L +       + I       +   F  NG     S  KD     +S +L   + ++LT+
Sbjct: 1389 KLWNL----MGELIYTLPGNNV--TFHPNGLIVASSDAKDIRFWNFSEELLHTS-KKLTD 1441

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             +      ++S DSS I   S     E + +   +G D     +  +       +S    
Sbjct: 1442 DIG---EVAFSSDSSLI--TSFGRFDEVIKLWNLHG-DLLETFRGHQDGVLAVAFSHDSQ 1495

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             I  +        +  +  D   E       ++ A  +SP G+ +I       D   KL+
Sbjct: 1496 YIV-SSSDDRTIKLWNLHGDL-LETFRGHQDSVFAVAFSPDGQYII---SGSNDRTIKLW 1550

Query: 420  SIDLN 424
            ++  +
Sbjct: 1551 NLHGD 1555


>gi|254412090|ref|ZP_05025865.1| hypothetical protein MC7420_5479 [Microcoleus chthonoplastes PCC
           7420]
 gi|196181056|gb|EDX76045.1| hypothetical protein MC7420_5479 [Microcoleus chthonoplastes PCC
           7420]
          Length = 1162

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 99/301 (32%), Gaps = 43/301 (14%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWD+  ++ +  +                   ++       G+      +++ +   G 
Sbjct: 674 RLWDLSGQQLVEFRGHQG--------------QVWSVSFSPNGE------YIATAGEDGT 713

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +    + D  G  +          +    FSPN + +A A+ D        L +    +
Sbjct: 714 AR----LWDLSGQQL-VEFEGHQGKVLSVSFSPNSEYLATASTDG----TARLWNLFGKQ 764

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +  G  +  +L+  FS NG+    +   D    ++  DL  N    L        S S
Sbjct: 765 LVEFQGGVQGTVLSVDFSPNGEYIA-TAHDDSTTRLW--DLSGNQIAELKGHQGWVTSVS 821

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SP+   +   S+      +  +    S  K   +  +       +SP G  IA     G
Sbjct: 822 FSPNGEYLATASE----GGIVRLWDLFSHPKAEFRGHQGWLTSVSFSPNGQYIATASSDG 877

Query: 369 EKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                 +    G+Q          +   ++SP+G  +        D  ++L+ +  N + 
Sbjct: 878 TA---RLWDLSGNQNAEFKGHQGWVTRISFSPNGEYIA---TAGEDGTARLWDLSGNQKA 931

Query: 428 E 428
           E
Sbjct: 932 E 932



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/282 (16%), Positives = 97/282 (34%), Gaps = 42/282 (14%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG--------ANIRYLTP 208
            I D+I +    +      RI  VS S  S      +     DG         N +    
Sbjct: 552 QILDNIRERNQIK--GHQQRIWHVSFSPNS----KYMATASSDGTARLWDLSGNQKAEFK 605

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                +    FSPN + +A  T  ++   R++ +  +     +     +  + +  FS N
Sbjct: 606 GHQGWVTHVSFSPNGEYIA--TAGEDGTARLWDLSGKQLVEFR---GHQGQVWSVSFSPN 660

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+    +  +D    ++  DL                S S+SP+   I   +  +G  +L
Sbjct: 661 GEYIA-TAGEDGTARLW--DLSGQQLVEFRGHQGQVWSVSFSPNGEYIA-TAGEDGTARL 716

Query: 329 YVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSG-----EKFAIGVMKKDGSQ 382
           +    + S Q+ +  +  +       +SP  + +A     G       F   +++  G  
Sbjct: 717 W----DLSGQQLVEFEGHQGKVLSVSFSPNSEYLATASTDGTARLWNLFGKQLVEFQGGV 772

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                    + +  +SP+G  +        D+ ++L+ +  N
Sbjct: 773 ------QGTVLSVDFSPNGEYIA---TAHDDSTTRLWDLSGN 805



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 24/253 (9%)

Query: 170  KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            +  F+    +++ +   G  +    + D  G N +         L +  FSPN Q +A A
Sbjct: 901  RISFSPNGEYIATAGEDGTAR----LWDLSG-NQKAEFKGHQDWLTDVSFSPNGQYMATA 955

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            + D        L D    +  +  G  +  + +  FS N      +  +D  +  +   L
Sbjct: 956  SSDG----TARLWDLSGKQKAEFKG-HQGWVTSVSFSPNEPYIA-TAGEDGTVRFW--HL 1007

Query: 290  QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
              N             + S+SP    I   +  +G  +L+    +G+      +  +   
Sbjct: 1008 SGNPLTGFQGHQDWITNVSFSPTGEYIA-TASHDGTARLW--DLSGNPLAEF-KGHQGWV 1063

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
                +SP    IA     G      +    G+           + + ++SP G+ L  + 
Sbjct: 1064 RSVSFSPNELYIATAGEDGTA---RLWDLWGNPLAEFKGHQRAVTSVSFSPDGKYLATAS 1120

Query: 409  KKDGDTGSKLYSI 421
                D  ++++ +
Sbjct: 1121 H---DGTARIWRV 1130



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 16/137 (11%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SP+S  +   +  +G  +L+ +     +QK   +  +       +SP G+ IA     
Sbjct: 574 SFSPNSKYMA-TASSDGTARLWDLS---GNQKAEFKGHQGWVTHVSFSPNGEYIATAGED 629

Query: 368 GEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           G      +    G Q          + + ++SP+G  +        D  ++L+  DL+G 
Sbjct: 630 GTA---RLWDLSGKQLVEFRGHQGQVWSVSFSPNGEYIA---TAGEDGTARLW--DLSG- 680

Query: 427 NETLINTPAYASDPQWV 443
            + L+    +     W 
Sbjct: 681 -QQLVEFRGHQGQ-VWS 695


>gi|170115898|ref|XP_001889142.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635932|gb|EDR00233.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1499

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 58/318 (18%), Positives = 104/318 (32%), Gaps = 53/318 (16%)

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                    R+WD      +IG          R   H   D++  S+              
Sbjct: 1111 SGSTDATLRVWDALTGLSVIG--------PLR--GH---DEVVTSVAVSPDG-------- 1149

Query: 181  SESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
               + SG    ++ V D   G ++ +     D  +    FSP+ + +A  ++D    +R+
Sbjct: 1150 -RYIASGSNDCTVRVWDALTGQSVIHPLTGHDCAIMSVAFSPDGRYIASGSWDM--TVRI 1206

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERL 297
            +   T        IG+   +  +  FS +G+   IS  +D  +  +  D  +       L
Sbjct: 1207 WNALTGQSVLDPFIGHTDCIQ-SVSFSPDGRFI-ISGSEDRTIRAW--DALTGQSIMNPL 1262

Query: 298  TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSP 356
                   +S ++SPD   IV  S     + + V   +       +    +       +SP
Sbjct: 1263 QGHKHAVLSVAFSPDGRYIVSGSH---DKTVRVWDFHTGQSVMTLLMGHDFHVTSVAFSP 1319

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-----NLQAPTWSPSGRSLIFSRKKD 411
             G  I           I +        R L E        +++  +SP GR +       
Sbjct: 1320 DGRYIVSGSNDKT---IRLWDAVTG--RSLGEPFKGHYKGVRSVVFSPDGRHIA---SGS 1371

Query: 412  GDTGSKLYS-----IDLN 424
             D   +L+      IDLN
Sbjct: 1372 SDNTIRLWDAHAACIDLN 1389



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 90/306 (29%), Gaps = 48/306 (15%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSL----------GAQVLVTGRVIKEGKDRLRVE---- 127
            ++     + I +  +    + W++L          G   +VT  V      R        
Sbjct: 1100 VAFSPNGKHIVSGSTDATLRVWDALTGLSVIGPLRGHDEVVT-SVAVSPDGRYIASGSND 1158

Query: 128  --FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
               R+WD    + +I               H  +  I        G            + 
Sbjct: 1159 CTVRVWDALTGQSVIH----------PLTGHDCA--IMSVAFSPDG----------RYIA 1196

Query: 186  SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            SG    ++ + +   G ++          +    FSP+ +   +     ED         
Sbjct: 1197 SGSWDMTVRIWNALTGQSVLDPFIGHTDCIQSVSFSPDGR---FIISGSEDRTIRAWDAL 1253

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                    +   +  +L+  FS +G+  + S   D+ + ++      +    L    F  
Sbjct: 1254 TGQSIMNPLQGHKHAVLSVAFSPDGRYIV-SGSHDKTVRVWDFHTGQSVMTLLMGHDFHV 1312

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SPD   IV  S+    + + +  +  G       +         V+SP G  IA 
Sbjct: 1313 TSVAFSPDGRYIVSGSN---DKTIRLWDAVTGRSLGEPFKGHYKGVRSVVFSPDGRHIAS 1369

Query: 364  TKFSGE 369
                  
Sbjct: 1370 GSSDNT 1375



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 70/223 (31%), Gaps = 19/223 (8%)

Query: 193  LCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + V D   G NI               +SP+ + +   +      +   L    I    +
Sbjct: 819  IHVWDALTGHNIMNFQDYAHYASSV-AYSPDGKYIVSGSAYGTLRVWDALSGLCIMNPLR 877

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +       + +  FS +G   + S   D+ + +++      A + L +      S +YSP
Sbjct: 878  K---HDGCVTSVAFSPDGVHIV-SGSADKTIRLWNTLTGEGAMDPLKDHGGGVNSVAYSP 933

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLIAFTKFSG 368
                I+      G +   V   +    + +                SP G  I    +  
Sbjct: 934  SGRHII-----SGSDDCTVRIWDAGTSQCVMDPLIGHNTGILSVAVSPDGRNIVSGSYDS 988

Query: 369  EKFAIGVMK-KDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRK 409
                I V     G    +L   S+  A   +SP G+ ++ +  
Sbjct: 989  T---IMVWDALSGQSLMVLFRGSDAIATVAFSPDGKHILCATS 1028



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/323 (12%), Positives = 88/323 (27%), Gaps = 43/323 (13%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIG---------KKFFSSPASWRKIAHTIS 159
             V      +  V        R+WD      I+               SP     ++ +  
Sbjct: 842  SVAYSPDGKYIVSGSAYGTLRVWDALSGLCIMNPLRKHDGCVTSVAFSPDGVHIVSGSAD 901

Query: 160  DDIYQSIT----------GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP- 208
              I    T           + G   + + +           +   V   D    + +   
Sbjct: 902  KTIRLWNTLTGEGAMDPLKDHGGGVNSVAYSPSGRHIISGSDDCTVRIWDAGTSQCVMDP 961

Query: 209  --SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                +  +     SP+ + +   +YD      + + D    ++   +      I    FS
Sbjct: 962  LIGHNTGILSVAVSPDGRNIVSGSYDS----TIMVWDALSGQSLMVLFRGSDAIATVAFS 1017

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             +GK  L +   +  +  ++          L +        ++SP+   I+      G  
Sbjct: 1018 PDGKHILCATS-NYIIRFWNALTSHCMLSPLEDDEGSVFPVAFSPNGKHII---SGCGGN 1073

Query: 327  QLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + V  +  G  +    +  + +     +SP G  I           + V         +
Sbjct: 1074 TIKVWDALAGHTEVDHVRGHDENILSVAFSPNGKHIVSGSTDAT---LRVWDALTGLSVI 1130

Query: 386  LVEDSNLQ---APTWSPSGRSLI 405
                 + +   +   SP GR + 
Sbjct: 1131 GPLRGHDEVVTSVAVSPDGRYIA 1153



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 61/188 (32%), Gaps = 7/188 (3%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P   K++                       + +   ++   +  +S +G+   I    
Sbjct: 758 FAPQHSKISLHFRKYFRKTLTIEDGQMKQWPDRCLIRIKTSHSSLAYSPDGR--CIVSGY 815

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSD 337
             A+ ++   L  +      +      S +YSPD   IV  S       L V  + +G  
Sbjct: 816 LGAIHVWDA-LTGHNIMNFQDYAHYASSVAYSPDGKYIVSGS---AYGTLRVWDALSGLC 871

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                +  +       +SP G  I              +  +G+ + L      + +  +
Sbjct: 872 IMNPLRKHDGCVTSVAFSPDGVHIVSGSADKTIRLWNTLTGEGAMDPLKDHGGGVNSVAY 931

Query: 398 SPSGRSLI 405
           SPSGR +I
Sbjct: 932 SPSGRHII 939


>gi|84625732|ref|YP_453104.1| putative dipeptidyl peptidase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|15055555|gb|AAK82926.1| putative dipeptidyl peptidase [Xanthomonas oryzae pv. oryzae]
 gi|84369672|dbj|BAE70830.1| putative dipeptidyl peptidase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 789

 Score = 82.8 bits (203), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 88/214 (41%), Gaps = 17/214 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATE---RLT 298
            + +RA +   N      A  +S +G+   + ++  +  D +   VDL +   +   RL+
Sbjct: 322 LKGNRAVRVESNGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDLDNAKLQPRHRLS 381

Query: 299 NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++ +IN   +   + PD+  +   S+  G  QLY M+ N   ++R     +     PV S
Sbjct: 382 DSAWINWDFNDFGWLPDNRTLWLLSEESGYSQLYTMEGNSKPRQR--TRGKWEVSMPVPS 439

Query: 356 PQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  + F         + +  +     Q   +   + ++  + SP+G+ L+        
Sbjct: 440 ADGSGMFFLCNQKWPGDYEVCKLDLRNDQLTEVTALNGVEGFSLSPNGQQLL-VSYSGSY 498

Query: 414 TGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
             ++L  +   G   T++    TPA+ + P W+ 
Sbjct: 499 LPTQLAVVPATGGQATVLTDTRTPAFKAQP-WIA 531



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 16/142 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--S 258
           A+  ++ PS DQ      +  + ++V Y        +R     +      +R+ +     
Sbjct: 31  ADPDWIGPSVDQA----WWQWDGKQVQYLLKRAGSPVRDTYRQSTAGGTAERVADTARAG 86

Query: 259 MILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +  A P + +  +R L +   D    I+  DL+S A  +LT +  I     ++ D   I 
Sbjct: 87  LDAANPSYDATRQRMLFARNGD----IFLRDLRSGALTQLTRSNEIESRPQFASDGGAIW 142

Query: 318 FESDREGKEQLYVMQSNGSDQK 339
               R G    Y  +++G   +
Sbjct: 143 ----RAGNN-WYHWRADGGTAQ 159



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/191 (12%), Positives = 61/191 (31%), Gaps = 17/191 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-------PNQQKV 226
           + R + V    V    +    +   D  N +     R        +        P+ + +
Sbjct: 346 DGRNVAVEIRAVDNKDR---WIASVDLDNAKLQPRHRLSDSAWINWDFNDFGWLPDNRTL 402

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDI 284
              + +        L     +  P++    +  +  P  S++G        +      ++
Sbjct: 403 WLLSEESG---YSQLYTMEGNSKPRQRTRGKWEVSMPVPSADGSGMFFLCNQKWPGDYEV 459

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQ 343
             +DL+++    +T    +    S SP+  Q++          QL V+ + G     ++ 
Sbjct: 460 CKLDLRNDQLTEVTALNGVEGF-SLSPNGQQLLVSYSGSYLPTQLAVVPATGGQATVLTD 518

Query: 344 DKEASYFDPVW 354
            +  ++    W
Sbjct: 519 TRTPAFKAQPW 529


>gi|317155299|ref|XP_003190585.1| WD domain protein [Aspergillus oryzae RIB40]
          Length = 1301

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 52/294 (17%), Positives = 104/294 (35%), Gaps = 40/294 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            GR++  G + + V  RLWD                 ++++  +  SD I+       G  
Sbjct: 962  GRLLASGSEDMTV--RLWDTATG-------------TYQQTLNGHSDRIHSVAFLPNG-- 1004

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
              R+L       SG    ++ + D     ++         +    FSPN Q +   + D 
Sbjct: 1005 --RLL------ASGSEDRTVRLWDTVTGELQKTIEGHLGTVQSVAFSPNGQLLVSGSTDR 1056

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L DT      + +      +L+  FS +G R L S  +D  + ++ V ++   
Sbjct: 1057 ----TVRLWDTETGALQQILKGHSGRVLSVVFSPDG-RLLSSGSEDNIICLWEV-VKGAL 1110

Query: 294  TERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               LT       S  +SP+   +   S DR     + +  +     ++       +    
Sbjct: 1111 QRTLTGHSSGIRSVVFSPNGRLLASGSEDRT----VRLWDTVTGKLQKTFNGHLNAIQSV 1166

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLI 405
            ++SP   L+           I +   +    +  LV+   +++  +SP  + + 
Sbjct: 1167 IFSPNSYLVVSGSTDKT---IRLWDTETGALQQTLVQSGAIRSVAFSPHDQLVA 1217



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 59/312 (18%), Positives = 110/312 (35%), Gaps = 37/312 (11%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDR---KQIIGK-------------KFFSSPASWR--KIA 155
            GR++  G +   V  RLWD       K I G              +   S ++ R  ++ 
Sbjct: 1004 GRLLASGSEDRTV--RLWDTVTGELQKTIEGHLGTVQSVAFSPNGQLLVSGSTDRTVRLW 1061

Query: 156  HTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
             T +  + Q + G  G   S +      +  SG   N +C+ +     ++         +
Sbjct: 1062 DTETGALQQILKGHSGRVLSVVFSPDGRLLSSGSEDNIICLWEVVKGALQRTLTGHSSGI 1121

Query: 215  FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
                FSPN + +A  + D      V L DT   +  K      + I +  FS N    ++
Sbjct: 1122 RSVVFSPNGRLLASGSEDR----TVRLWDTVTGKLQKTFNGHLNAIQSVIFSPN-SYLVV 1176

Query: 275  SVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            S   D+ + ++  D ++ A ++ L  +  I  S ++SP   Q+V    R+   + +    
Sbjct: 1177 SGSTDKTIRLW--DTETGALQQTLVQSGAI-RSVAFSPH-DQLVASGSRDSIVRFW--DL 1230

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                 ++             +SP G L+A          + +             + N  
Sbjct: 1231 ATGAPQQTFNGHSDRIHLVAFSPDGRLLATGSHDQT---VRLWNIATGALLQ-TLNVNGL 1286

Query: 394  APTWSPSGRSLI 405
            AP    SG  ++
Sbjct: 1287 APLMFNSGGKIM 1298



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 87/242 (35%), Gaps = 26/242 (10%)

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQQKV-- 226
            IL   ++ +SG    ++     D    R+L  +R  +   P         F+P    +  
Sbjct: 862  ILDTLQTGISGNESPAIWDFLHD--AKRFLLKNRQIVDEAPLQIYCAGLVFAPQTAIIRR 919

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             + +     I +   ++ R     + +      + +  FSS+G+    S  +D  + ++ 
Sbjct: 920  QFGSEGPSWICQFPQVEERWSAELQALEGHSQPVNSVAFSSDGRLLA-SGSEDMTVRLW- 977

Query: 287  VDLQSNATERLTNTLFINI-SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQD 344
             D  +   ++  N     I S ++ P+   +   S DR     + +  +   + ++  + 
Sbjct: 978  -DTATGTYQQTLNGHSDRIHSVAFLPNGRLLASGSEDRT----VRLWDTVTGELQKTIEG 1032

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGR 402
               +     +SP G L+           + +   +    + ++      + +  +SP GR
Sbjct: 1033 HLGTVQSVAFSPNGQLLVSGSTDRT---VRLWDTETGALQQILKGHSGRVLSVVFSPDGR 1089

Query: 403  SL 404
             L
Sbjct: 1090 LL 1091


>gi|20091530|ref|NP_617605.1| cell surface protein [Methanosarcina acetivorans C2A]
 gi|19916684|gb|AAM06085.1| cell surface protein [Methanosarcina acetivorans C2A]
          Length = 909

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 68/177 (38%), Gaps = 14/177 (7%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G R +    ++   DIY  DL ++   R+T         S   D  +IV++ DR G
Sbjct: 625 PDIYGNRIVWQDLRNGNYDIYMYDLSTSRETRITANESNQTYPSLYCD--RIVWQDDRNG 682

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +  +Y+   + S + +IS    A          GD I +  +      I V     S+E 
Sbjct: 683 QYDIYMYNISTSKETQISTSGRAQRPKIY----GDRIMWMDYRTRNEGIYVHDLSTSKET 738

Query: 385 LLVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            ++       P +    G  +++   +       +Y  DL+   ET I +   A+ P
Sbjct: 739 RIISKG---IPQYINMQGNLIVWHDLR--YISPDIYMYDLSTSKETQITSNGEATFP 790



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 80/259 (30%), Gaps = 52/259 (20%)

Query: 221 PN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           P+    ++ +    + +   +Y+ D    R  +   N  +      +     R +    +
Sbjct: 625 PDIYGNRIVWQDLRNGN-YDIYMYDLSTSRETRITANESNQTYPSLYC---DRIVWQDDR 680

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   DIY  ++ ++   ++ +T              +I++   R   E +YV   + S +
Sbjct: 681 NGQYDIYMYNISTSKETQI-STSGRAQRPKIY--GDRIMWMDYRTRNEGIYVHDLSTSKE 737

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            RI             + QG+LI +         I +     S+E  +  +     P   
Sbjct: 738 TRIISKG----IPQYINMQGNLIVWHDLRYISPDIYMYDLSTSKETQITSNGEATFPNV- 792

Query: 399 PSGRSLIFSRKKDG-------------------------------------DTGSKLYSI 421
             G  +++   ++                                        G  +Y  
Sbjct: 793 -YGNRIVWQEWREDVTTDIYMYDLSTSKKTQITTNKSSQYYPAIYGNKIVWRQGYDIYMY 851

Query: 422 DLNGRNETLINTPAYASDP 440
           DL+ + ET +     A++P
Sbjct: 852 DLSTQKETRVTASGSATEP 870



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/285 (13%), Positives = 84/285 (29%), Gaps = 41/285 (14%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                    ++++I+F   +     ++  L V   D  N      + +     P      
Sbjct: 80  HYYASHPAIYDNKIVFCICNYNENPVRYRLYV--YDILNSTSSLIAENLSHCVPDIY--G 135

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM- 282
            ++ +A   +     VY+ +       +   +       P  S    + +     D    
Sbjct: 136 DRIVWAEERNYKT-GVYMYNISTQMKTQITTS--GSASNP--SIYENKIVWVGYGDNGTI 190

Query: 283 -----------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKE 326
                       I   DL +     ++       +        +IV++  R      G+ 
Sbjct: 191 TDRNNNSISIDSICIYDLSTKKETMISTG-GRAYAPVIY--GDRIVWQDSRNSDFTKGRG 247

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +Y+   +   + RIS   ++S      SP   GD I +      K+ I +      +E 
Sbjct: 248 DVYMYNLSTEKESRISYSGQSSLGS---SPAIYGDRIVWQDHRNGKYNIYMYNLSTQKET 304

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKK-----DGDTGSKLYSIDLN 424
            +    +   P     G  +++   +          S +Y  DL 
Sbjct: 305 QITTSGSAMGPDI--YGDRIVYRDNRQRLPPGDGYFSDVYVYDLT 347



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 92/272 (33%), Gaps = 42/272 (15%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D    N   +T         P    N  K+ +   +  +    Y +          
Sbjct: 62  IHLYDLKTGNDTIITTPEHYYASHPAIYDN--KIVFCICNYNENPVRYRLYVYD------ 113

Query: 253 IGNFRSMILAPRFS---SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           I N  S ++A   S    +  G R + + +++    +Y  ++ +    ++T +     + 
Sbjct: 114 ILNSTSSLIAENLSHCVPDIYGDRIVWAEERNYKTGVYMYNISTQMKTQITTSGSA-SNP 172

Query: 308 SYSPDSSQIVFE--------SDREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           S   +  +IV+         +DR       + + +   +   +  IS    A  + PV  
Sbjct: 173 SIYEN--KIVWVGYGDNGTITDRNNNSISIDSICIYDLSTKKETMISTGGRA--YAPVI- 227

Query: 356 PQGDLIAFTKFSGEKF-----AIGVMKKDGSQERLLVEDSNLQAPTWSP--SGRSLIFSR 408
             GD I +       F      + +      +E  +         + SP   G  +++  
Sbjct: 228 -YGDRIVWQDSRNSDFTKGRGDVYMYNLSTEKESRISYSGQSSLGS-SPAIYGDRIVWQD 285

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            ++G     +Y  +L+ + ET I T   A  P
Sbjct: 286 HRNGK--YNIYMYNLSTQKETQITTSGSAMGP 315


>gi|254523065|ref|ZP_05135120.1| peptidase, S9A/B/C family, catalytic domain protein
           [Stenotrophomonas sp. SKA14]
 gi|219720656|gb|EED39181.1| peptidase, S9A/B/C family, catalytic domain protein
           [Stenotrophomonas sp. SKA14]
          Length = 786

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 70/179 (39%), Gaps = 13/179 (7%)

Query: 264 RFSSNGKRALISVQKDEA--MDIYSVDLQSNATE---RLTNTLFINISAS---YSPDSSQ 315
           R+S++G++A + ++ ++     I SV+      +   RLT+  +IN   +   +  D   
Sbjct: 340 RWSADGQQAAVMLRANDNKDRWIISVNAADGRVQNRHRLTDNAWINWGFNDFGWMADGRT 399

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAI 373
           +   S+  G   LY     GS + +     +     PV S  G    F   + +   + +
Sbjct: 400 LWLLSEESGFSHLYT--QAGSAKPQALTSGKWETSAPVLSADGKGFYFLCNQQAPHDYEV 457

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +     + R L   + ++  + SP G+ L+  R        +L  +   G    ++ 
Sbjct: 458 CAVDTGSRRVRELTSLNGVEDFSLSPDGQQLL-VRYSGAYLPPQLAVLPSTGGQARVLT 515



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 68/199 (34%), Gaps = 10/199 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPK-RIGNFRSM 259
            R L    D +    R+S + Q+ A      D++D   + +         + R+ +   +
Sbjct: 325 ERSLQVMSDFMGGGIRWSADGQQAAVMLRANDNKDRWIISVNAADGRVQNRHRLTDNAWI 384

Query: 260 ILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                   + ++G+   +  ++     +Y+    S   + LT+  +   +   S D    
Sbjct: 385 NWGFNDFGWMADGRTLWLLSEESGFSHLYT-QAGSAKPQALTSGKWETSAPVLSADGKGF 443

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIG 374
            F  +++      V   +   ++           D   SP G  +   ++SG      + 
Sbjct: 444 YFLCNQQAPHDYEVCAVDTGSRRVRELTSLNGVEDFSLSPDGQQLL-VRYSGAYLPPQLA 502

Query: 375 VMKKDGSQERLLVEDSNLQ 393
           V+   G Q R+L +     
Sbjct: 503 VLPSTGGQARVLTDTRTAD 521



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 69/194 (35%), Gaps = 11/194 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG--ANIRYLTPSR--DQILFEPRFSPNQ 223
           G +   + +   V         +  + V   DG   N   LT +   +    +  +  + 
Sbjct: 338 GIRWSADGQQAAVMLRANDNKDRWIISVNAADGRVQNRHRLTDNAWINWGFNDFGWMADG 397

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEA 281
           + +   + +       +L        P+ + + +    AP  S++GK      + Q    
Sbjct: 398 RTLWLLSEESGFS---HLYTQAGSAKPQALTSGKWETSAPVLSADGKGFYFLCNQQAPHD 454

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
            ++ +VD  S     LT+   +    S SPD  Q++   S      QL V+ S G   + 
Sbjct: 455 YEVCAVDTGSRRVRELTSLNGVEDF-SLSPDGQQLLVRYSGAYLPPQLAVLPSTGGQARV 513

Query: 341 ISQDKEASYFDPVW 354
           ++  + A Y    W
Sbjct: 514 LTDTRTADYKARQW 527



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 7/144 (4%)

Query: 308 SYSPDSSQIVF---ESDREGKEQLYVMQSNGS--DQKRISQDK--EASYFDPVWSPQGDL 360
            +S D  Q       +D + +  + V  ++G   ++ R++ +      + D  W   G  
Sbjct: 340 RWSADGQQAAVMLRANDNKDRWIISVNAADGRVQNRHRLTDNAWINWGFNDFGWMADGRT 399

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +           +         + L        AP  S  G+   F   +      ++ +
Sbjct: 400 LWLLSEESGFSHLYTQAGSAKPQALTSGKWETSAPVLSADGKGFYFLCNQQAPHDYEVCA 459

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
           +D   R    + +     D     
Sbjct: 460 VDTGSRRVRELTSLNGVEDFSLSP 483


>gi|301310891|ref|ZP_07216820.1| putative Cytochrome c binding protein [Bacteroides sp. 20_3]
 gi|300830954|gb|EFK61595.1| putative Cytochrome c binding protein [Bacteroides sp. 20_3]
          Length = 489

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 69/479 (14%), Positives = 154/479 (32%), Gaps = 113/479 (23%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSP------VSI--AFTKFVSIDELGGKV 65
           ++++C ++  + G          +      +  P      V +  A   F  +D+    +
Sbjct: 3   RLSICWIIGCLLGLVACRPEVPAQAEQGETDVFPDYREVTVPVNMAPPNFKLVDQQLQGI 62

Query: 66  SE--------VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +         +++ D     VFNL                    DW +L           
Sbjct: 63  TRLKTMNRELIIAAD---HGVFNLPET-----------------DWKTLSQDA------- 95

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSR 176
                              KQI    +F  P ++W+++    S  IY S          R
Sbjct: 96  -----------------QGKQIDVTVYFREPQSNWKQM----SFPIYVSRDSVDAYLVYR 134

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            +F    + + +     CV +    +I    + +   +          +++ +      +
Sbjct: 135 RIFPGYRMWNEMGIYQRCVENYVEKSILDNQSTNNSCMNCHAFCERQGEQMLFHQRGSHN 194

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------DEAMDIYSVD 288
              +         A +R G   S +  P +  +G+    S  +        +   I   D
Sbjct: 195 GTYLIDHRQVKKIALERDGKLASFVY-PYWHPSGRYVAFSTNETHQDFHLSDENRIEVYD 253

Query: 289 LQS------NATERLTNTL------FINISASYSPDSSQIVFES---------DREGKEQ 327
           ++S         ER+ ++             +++PD + ++F S          R+ +  
Sbjct: 254 VESDVLIYDTEKERVFSSPLLASMACYETFPTFTPDGNYLLFCSADSVCMPENYRDVRYN 313

Query: 328 LYVM---QSNGSDQKRI-----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG----- 374
           L  +     +GS   ++     +++   S   P  SP G  + +T      F+I      
Sbjct: 314 LLRVAFDPEDGSIGTQVDTLYNAREAGRSVKFPRVSPDGKRLLYTVSDYGNFSIWHKDAD 373

Query: 375 --VMKKDGSQERLL--VEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             ++         L  V   ++++  +WS + R  +FS ++D    ++ Y + +N R +
Sbjct: 374 LYMLDLSTGAIDSLPEVNSPDVESYHSWSGNSRWFVFSSRRDDGLFTRPYLVHVNERGQ 432


>gi|288916059|ref|ZP_06410440.1| NB-ARC domain protein [Frankia sp. EUN1f]
 gi|288352455|gb|EFC86651.1| NB-ARC domain protein [Frankia sp. EUN1f]
          Length = 1303

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 84/250 (33%), Gaps = 23/250 (9%)

Query: 171  GDFNSRILFVSESV-VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            GD+ + + F  + +  +G    ++ + D   G  IR        ++    FSP+ Q +A 
Sbjct: 1016 GDWMTAVAFSRQGLLATGGADGAVQLWDPVRGTPIRTPFTGHCDMVTAVAFSPDGQFLAA 1075

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRS---MILAPRFSSNGKRALISVQKDEAMDIY 285
            A  D     +  L D      P            + A  F  +G+   ++          
Sbjct: 1076 AGRD-----QAILWDRENGGEPVATLAGPGRGEWVTAVAFDPDGRFLAVA----GRDQAI 1126

Query: 286  SVDLQSNATERLTNTLFIN--ISASYSPDSSQIV-FESDREGKEQLYVMQ-SNGSDQKRI 341
              D ++      T  +      +  +SPD   +    SDR     + +   ++ ++  R 
Sbjct: 1127 LWDRENRGGPVATFAVGDEWVTAVGFSPDGQLLATASSDRT----IRLWDPADATEPTRT 1182

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                        +SP G L+A T        +   + DG    L      + A  +SP G
Sbjct: 1183 IDGHGHGVTAMAFSPDGSLLA-TADQDATVRLWDPEGDGGPITLAGHTDWVTAVAFSPDG 1241

Query: 402  RSLIFSRKKD 411
            R L  + +  
Sbjct: 1242 RYLATASRDQ 1251



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 103/297 (34%), Gaps = 46/297 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR++  G     V  RLW      ++              +AH       + ++   G  
Sbjct: 735 GRLLAAGGGDGTV--RLWSPATGTELPAS-----------LAHG------EPVSTLAGAP 775

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             +++ V  +  +  + + +       A    +    ++ +    FSP+ + +  A YD+
Sbjct: 776 AGQVIAVGGTGGAVRLWDPV-------ARTNEVLAGHERGVTAVAFSPDGKLLVTAGYDE 828

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +    V L D   +     +      + A  FS +GK    +   D  + ++  +  +  
Sbjct: 829 K----VRLRDLAANVEKPALVGLDGWVNAVAFSPDGKLLA-TAGYDGTVRLW--NPATG- 880

Query: 294 TERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
             + T+    +   + +Y+ D   I F    +G  +L+          +     E S   
Sbjct: 881 ERQPTSADHRDAVNAVAYATDGHLIAF-GGADGSVRLW--DPAMETNSQALAGAEGSVAA 937

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLI 405
             +SP G L+A    +     + + + +   + +     +   + A  +SP G  L 
Sbjct: 938 VAFSPDGSLLA----ASGDRKVRLWEPEAGADPITTLAGHSLGVAAVAFSPDGSLLA 990



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 84/283 (29%), Gaps = 38/283 (13%)

Query: 88   KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
             +     D +    DW +     +   R             +LWD              +
Sbjct: 1003 PRASAARDPVAGLGDWMT----AVAFSRQGLLATGGADGAVQLWDPVRG----------T 1048

Query: 148  PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
            P       H   D +        G F            +G  +  L   +  G  +  L 
Sbjct: 1049 PIRTPFTGH--CDMVTAVAFSPDGQFL---------AAAGRDQAILWDRENGGEPVATLA 1097

Query: 208  -PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             P R + +    F P+ + +A A  D      +                    + A  FS
Sbjct: 1098 GPGRGEWVTAVAFDPDGRFLAVAGRDQ----AILWDRENRGGPVATFAVGDEWVTAVGFS 1153

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGK 325
             +G+    +   D  + ++     +    R  +     ++A ++SPD S +   +D++  
Sbjct: 1154 PDGQLLA-TASSDRTIRLWD-PADATEPTRTIDGHGHGVTAMAFSPDGSLLA-TADQDAT 1210

Query: 326  EQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFS 367
             +L+  + +G     I+      +     +SP G  +A     
Sbjct: 1211 VRLWDPEGDGGP---ITLAGHTDWVTAVAFSPDGRYLATASRD 1250



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 81/255 (31%), Gaps = 34/255 (13%)

Query: 197  DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
               G         RD +     ++ +   +A+   D      V L D  ++   + +   
Sbjct: 877  PATGERQPTSADHRDAVNAV-AYATDGHLIAFGGADG----SVRLWDPAMETNSQALAGA 931

Query: 257  RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               + A  FS +G   L++   D  + ++  +  ++    L        + ++SPD S +
Sbjct: 932  EGSVAAVAFSPDGS--LLAASGDRKVRLWEPEAGADPITTLAGHSLGVAAVAFSPDGSLL 989

Query: 317  VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-----SGEKF 371
                  EG  +L+          R S  ++       W      +AF++       G   
Sbjct: 990  A-SGGAEGTVRLW--------DPRASAARDPVAGLGDWM---TAVAFSRQGLLATGGADG 1037

Query: 372  AIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            A+ +               +     A  +SP G+ L       G   + L+  +  G   
Sbjct: 1038 AVQLWDPVRGTPIRTPFTGHCDMVTAVAFSPDGQFLA----AAGRDQAILWDRENGGEPV 1093

Query: 429  TLINTPAYASDPQWV 443
              +  P      +WV
Sbjct: 1094 ATLAGPGR---GEWV 1105



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 6/101 (5%)

Query: 186  SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +     ++ + D  D              +    FSP+   +A A  D      V L D 
Sbjct: 1161 TASSDRTIRLWDPADATEPTRTIDGHGHGVTAMAFSPDGSLLATADQDA----TVRLWDP 1216

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
              D  P  +      + A  FS +G+    +  +D+ + ++
Sbjct: 1217 EGDGGPITLAGHTDWVTAVAFSPDGRYLA-TASRDQTVRLW 1256



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 63/186 (33%), Gaps = 14/186 (7%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                 + A  FS++G+    +   D  + ++S    +     L +   ++  A  +P  
Sbjct: 720 SGAGGSVNAVAFSADGRLLA-AGGGDGTVRLWSPATGTELPASLAHGEPVSTLAG-APAG 777

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             I       G      +    +    +    E       +SP G L+  T    EK  +
Sbjct: 778 QVIA----VGGTGGAVRLWDPVARTNEVLAGHERGVTAVAFSPDGKLLV-TAGYDEKVRL 832

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             +  +  +  L+  D  + A  +SP G+ L  +     D   +L++    G  +    T
Sbjct: 833 RDLAANVEKPALVGLDGWVNAVAFSPDGKLLATAGY---DGTVRLWN-PATGERQ---PT 885

Query: 434 PAYASD 439
            A   D
Sbjct: 886 SADHRD 891


>gi|218248855|ref|YP_002374226.1| WD40 domain-containing protein beta Propeller [Cyanothece sp. PCC
           8801]
 gi|218169333|gb|ACK68070.1| WD40 domain protein beta Propeller [Cyanothece sp. PCC 8801]
          Length = 197

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 52/147 (35%), Gaps = 12/147 (8%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           N+        +S D   +VF SDR+G+  +++     +    +            P  S 
Sbjct: 46  NSRSAEEFPRFSYDGRYLVFASDRQGQRGIWLYDRLNNRLLPLPGINQPGTRQDQPDISS 105

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDT 414
            G  I +      K  I +  +   Q   + ++   +   PT S +GR + F   + G  
Sbjct: 106 DGRYIVYVSEQEGKPDIFLYDRFTFQREQITKNWLGEVRHPTISGNGRLIAFEANRQGQW 165

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQ 441
              +Y           +NTP    +PQ
Sbjct: 166 DLVIYD--------RGLNTPLSVPNPQ 184



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 9/129 (6%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN------ISAS 308
           N RS    PRFS +G+  + +  +     I+  D  +N   RL     IN          
Sbjct: 46  NSRSAEEFPRFSYDGRYLVFASDRQGQRGIWLYDRLNN---RLLPLPGINQPGTRQDQPD 102

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S D   IV+ S++EGK  +++       +++I+++       P  S  G LIAF     
Sbjct: 103 ISSDGRYIVYVSEQEGKPDIFLYDRFTFQREQITKNWLGEVRHPTISGNGRLIAFEANRQ 162

Query: 369 EKFAIGVMK 377
            ++ + +  
Sbjct: 163 GQWDLVIYD 171



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 2/119 (1%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALI 274
            PRFS + + + +A+                   P    N        P  SS+G+  + 
Sbjct: 53  FPRFSYDGRYLVFASDRQGQRGIWLYDRLNNRLLPLPGINQPGTRQDQPDISSDGRYIVY 112

Query: 275 SVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +++   DI+  D  +   E++T N L      + S +   I FE++R+G+  L +  
Sbjct: 113 VSEQEGKPDIFLYDRFTFQREQITKNWLGEVRHPTISGNGRLIAFEANRQGQWDLVIYD 171



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 18/139 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILF-------------EPRFSPNQQKVAYATYD 232
           S   +  +   DR G    +L    +  L              +P  S + + + Y +  
Sbjct: 57  SYDGRYLVFASDRQGQRGIWLYDRLNNRLLPLPGINQPGTRQDQPDISSDGRYIVYVSEQ 116

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           +     ++L D    +  +   N+   +  P  S NG+       +    D+   D   N
Sbjct: 117 EGKP-DIFLYDRFTFQREQITKNWLGEVRHPTISGNGRLIAFEANRQGQWDLVIYDRGLN 175

Query: 293 ATERLTN----TLFINISA 307
               + N       IN + 
Sbjct: 176 TPLSVPNPQQKETGINTNP 194



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           L   S  + P +S  GR L+F+  + G  G  LY    +  N  L+  P 
Sbjct: 45  LNSRSAEEFPRFSYDGRYLVFASDRQGQRGIWLY----DRLNNRLLPLPG 90


>gi|302560716|ref|ZP_07313058.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302478334|gb|EFL41427.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 1071

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 99/270 (36%), Gaps = 24/270 (8%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R       +V+   ++ + +   DG    +   + +  +  PR SP+   VA+ +  D  
Sbjct: 17  RFPHPHGELVAFTAEDDVWLAPLDGGRA-WRVSADNVPVNHPRVSPDGTTVAWTSTRDG- 74

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKD---EAMDIYSVDLQS 291
              V++         +R+ ++ S     R ++++G+   +S +           +V L  
Sbjct: 75  APEVHVAPVD-GGPGRRLTHWGSARTQVRGWTADGRVLALSTEGQASLRRSWARAVPLDG 133

Query: 292 NATERLTNTLFINI--SASY----SPDSSQIVFE-SDREGK-EQLYVMQSNGSDQKRISQ 343
                L      ++          +P   +  +    R G   +L++ ++   +  R+ +
Sbjct: 134 GPAATLPYGPVGDVADGPHTVLLSAPMGREAAWWKRYRGGTAGKLWIDRAGDGEFVRLHE 193

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             + +   P+W+  GD IAF        A+     DGS  R         A   +  G  
Sbjct: 194 GLDGNIEYPLWA--GDRIAFLSDHEGTGALYSSLADGSDLRRHTPLGGFYARHAASDGTR 251

Query: 404 LIFSRKKDGDTGSKLYSI-DLNGRNETLIN 432
           +++S         +L+ + DL+G     ++
Sbjct: 252 VVYSS------AGELWILDDLDGAEPRRLD 275



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 18/191 (9%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+    + + D    ++   L      R++           SPD + + + S R+G  
Sbjct: 21  PHGELVAFTAEDD----VWLAPLDGGRAWRVSADNVPVNHPRVSPDGTTVAWTSTRDGAP 76

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQE 383
           +++V   +G   +R++    A      W+  G ++A +              +  DG   
Sbjct: 77  EVHVAPVDGGPGRRLTHWGSARTQVRGWTADGRVLALSTEGQASLRRSWARAVPLDGGPA 136

Query: 384 RLL-------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI---NT 433
             L       V D        +P GR   + ++  G T  KL+ ID  G  E +      
Sbjct: 137 ATLPYGPVGDVADGPHTVLLSAPMGREAAWWKRYRGGTAGKLW-IDRAGDGEFVRLHEGL 195

Query: 434 PAYASDPQWVG 444
                 P W G
Sbjct: 196 DGNIEYPLWAG 206



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 48/307 (15%), Positives = 97/307 (31%), Gaps = 27/307 (8%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRY--LTPSRDQI 213
           +++D          G F +R      + V       L ++D  DGA  R   +     ++
Sbjct: 224 SLADGSDLRRHTPLGGFYARHAASDGTRVVYSSAGELWILDDLDGAEPRRLDIRLGGQRV 283

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--------RF 265
             +P      +    A+ D         +   +     R G  R++   P         F
Sbjct: 284 DLQPFPVNAARWFGSASPDHTARGSAVCVRGTVHWVTHRSGPARALAATPGVRARRPRTF 343

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSN-----ATERLTNT-LFINISASYSPDSSQIVFE 319
            ++G+  ++ V   E  D       +         R+    L   +  + +PD  +    
Sbjct: 344 RADGEEWVVWVTDAEGEDALEFAPATGLAPGAVPRRIAAGQLGRVVGLAMAPDGGRAAVA 403

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAIGVM 376
           S      ++ +++    + + + + ++      V+SP    +A++        +  +   
Sbjct: 404 SH---DGRVLLVERETGEVREVDRSEDGDVSGLVFSPDSGWLAWSHPGPRPLSQLKLA-H 459

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLINT 433
             D S            AP ++  GR L F   +  D     +  DL    G    LI  
Sbjct: 460 TTDLSVTEATPLRFQDYAPAFTLDGRHLAFLSSRSFDPVYDEHVFDLAFVEGVRPYLITL 519

Query: 434 PAYASDP 440
            A    P
Sbjct: 520 AATTPSP 526


>gi|257061917|ref|YP_003139805.1| hypothetical protein Cyan8802_4178 [Cyanothece sp. PCC 8802]
 gi|256592083|gb|ACV02970.1| WD40 domain protein beta Propeller [Cyanothece sp. PCC 8802]
          Length = 197

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 52/147 (35%), Gaps = 12/147 (8%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           N+        +S D   +VF SDR+G+  +++     +    +            P  S 
Sbjct: 46  NSRSAEEFPRFSYDGRYLVFASDRQGQRGIWLYDRLNNRLLPLPGINQPGTRQDQPDISS 105

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDT 414
            G  I +      K  I +  +   Q   + ++   +   PT S +GR + F   + G  
Sbjct: 106 DGRYIVYVSEQEGKPDIFLYDRFTFQREQITKNWLGEVRHPTISGNGRLIAFEANRQGQW 165

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQ 441
              +Y           +NTP    +PQ
Sbjct: 166 DLVIYD--------RGLNTPLSVPNPQ 184



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 9/129 (6%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN------ISAS 308
           N RS    PRFS +G+  + +  +     I+  D  +N   RL     IN          
Sbjct: 46  NSRSAEEFPRFSYDGRYLVFASDRQGQRGIWLYDRLNN---RLLPLPGINQPGTRQDQPD 102

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S D   IV+ S++EGK  +++       +++I+++       P  S  G LIAF     
Sbjct: 103 ISSDGRYIVYVSEQEGKPDIFLYDRFTFQREQITKNWLGEVRHPTISGNGRLIAFEANRQ 162

Query: 369 EKFAIGVMK 377
            ++ + +  
Sbjct: 163 GQWDLVIYD 171



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 2/119 (1%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALI 274
            PRFS + + + +A+                   P    N        P  SS+G+  + 
Sbjct: 53  FPRFSYDGRYLVFASDRQGQRGIWLYDRLNNRLLPLPGINQPGTRQDQPDISSDGRYIVY 112

Query: 275 SVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +++   DI+  D  +   E++T N L      + S +   I FE++R+G+  L +  
Sbjct: 113 VSEQEGKPDIFLYDRFTFQREQITKNWLGEVRHPTISGNGRLIAFEANRQGQWDLVIYD 171



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 43/139 (30%), Gaps = 18/139 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILF-------------EPRFSPNQQKVAYATYD 232
           S   +  +   DR G    +L    +  L              +P  S + + + Y +  
Sbjct: 57  SYDGRYLVFASDRQGQRGIWLYDRLNNRLLPLPGINQPGTRQDQPDISSDGRYIVYVSEQ 116

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           +     ++L D    +  +   N+   +  P  S NG+       +    D+   D   N
Sbjct: 117 EGKP-DIFLYDRFTFQREQITKNWLGEVRHPTISGNGRLIAFEANRQGQWDLVIYDRGLN 175

Query: 293 ATERLTN----TLFINISA 307
               + N       IN + 
Sbjct: 176 TPLSVPNPQQKETGINTNP 194



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           L   S  + P +S  GR L+F+  + G  G  LY    +  N  L+  P 
Sbjct: 45  LNSRSAEEFPRFSYDGRYLVFASDRQGQRGIWLY----DRLNNRLLPLPG 90


>gi|156052939|ref|XP_001592396.1| hypothetical protein SS1G_06637 [Sclerotinia sclerotiorum 1980]
 gi|154704415|gb|EDO04154.1| hypothetical protein SS1G_06637 [Sclerotinia sclerotiorum 1980 UF-70]
          Length = 1249

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 26/227 (11%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                     ++   FSP+  K+A  + D      + L DT      +R       + +  
Sbjct: 998  QTLEGHSSWVYSVAFSPDGTKIASGSRDR----TIRLWDTITGELLQRFKGHSDSVNSVA 1053

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS +G +   S  +D  + ++   +     +R         S ++SPD ++I   SD   
Sbjct: 1054 FSPDGTKIA-SGSRDRTIRLWDT-VTGEPLQRFEGHSNWVRSVAFSPDGTKIASGSD--- 1108

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             E + +  +      +      + +           IA          I +      +  
Sbjct: 1109 DETIRLWNTTTGKSLQ-RFKGHSDWVS-------TKIASGSDDDT---IRLWDTITGELL 1157

Query: 385  LLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              +E  +    +  +SP G  +       GD   +L+   + G +  
Sbjct: 1158 QTLEGYSDWISSIAFSPDGTKVA---SGSGDQMIRLWDT-ITGESLQ 1200



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 74/230 (32%), Gaps = 30/230 (13%)

Query: 159  SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            S  +Y       G            + SG    ++ + D     +          +    
Sbjct: 1004 SSWVYSVAFSPDG----------TKIASGSRDRTIRLWDTITGELLQRFKGHSDSVNSVA 1053

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+  K+A  + D      + L DT      +R     + + +  FS +G +   S   
Sbjct: 1054 FSPDGTKIASGSRDR----TIRLWDTVTGEPLQRFEGHSNWVRSVAFSPDGTKIA-SGSD 1108

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            DE + +++      + +R                S++I   SD    + + +  +   + 
Sbjct: 1109 DETIRLWNT-TTGKSLQRFKGHSDWV--------STKIASGSD---DDTIRLWDTITGEL 1156

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             +  +          +SP G  +A    SG++  I +      +    +E
Sbjct: 1157 LQTLEGYSDWISSIAFSPDGTKVA--SGSGDQM-IRLWDTITGESLQTLE 1203



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 68/225 (30%), Gaps = 42/225 (18%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
             K          RLWD    + +            R   H  SD +        G     
Sbjct: 1017 TKIASGSRDRTIRLWDTITGELL-----------QRFKGH--SDSVNSVAFSPDG----- 1058

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                   + SG    ++ + D                +    FSP+  K+A  + D+   
Sbjct: 1059 -----TKIASGSRDRTIRLWDTVTGEPLQRFEGHSNWVRSVAFSPDGTKIASGSDDE--- 1110

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              + L +T   ++ +R       +          +   S   D+ + ++  D  +    +
Sbjct: 1111 -TIRLWNTTTGKSLQRFKGHSDWVS--------TKIA-SGSDDDTIRLW--DTITGELLQ 1158

Query: 297  -LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             L        S ++SPD +++   S   G + + +  +   +  +
Sbjct: 1159 TLEGYSDWISSIAFSPDGTKVASGS---GDQMIRLWDTITGESLQ 1200



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 53/162 (32%), Gaps = 19/162 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH-----TIS----DDIYQSIT 167
             K          RLWD    + +  ++F       R +A       I+    D+  +   
Sbjct: 1059 TKIASGSRDRTIRLWDTVTGEPL--QRFEGHSNWVRSVAFSPDGTKIASGSDDETIRLWN 1116

Query: 168  GEKGD----FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
               G     F     +VS  + SG   +++ + D     +          +    FSP+ 
Sbjct: 1117 TTTGKSLQRFKGHSDWVSTKIASGSDDDTIRLWDTITGELLQTLEGYSDWISSIAFSPDG 1176

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             KVA  + D      + L DT    + + +    S+  +  F
Sbjct: 1177 TKVASGSGDQ----MIRLWDTITGESLQTLEYHSSLKASSAF 1214


>gi|23098536|ref|NP_692002.1| acylaminoacyl-peptidase [Oceanobacillus iheyensis HTE831]
 gi|22776762|dbj|BAC13037.1| acylaminoacyl-peptidase [Oceanobacillus iheyensis HTE831]
          Length = 667

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 80/227 (35%), Gaps = 56/227 (24%)

Query: 261 LAPRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             P ++++  R      K     +    +YS D+ +N T++ T     N +   +P ++Q
Sbjct: 20  SGPTYTASNNRFTYVSTKVNEDNEYESHVYSTDISTNQTKQWTFGKHSNTNFRINPSNTQ 79

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---------- 365
            VF+S R G  QL+++  +G + K+I+  ++ +Y  P W+P G  I F+           
Sbjct: 80  AVFQSTRSGTSQLWLIDLDGGEPKQITFFQKGAY-SPRWAPDGSSIFFSAPLNTDDDIHS 138

Query: 366 -----------------------------------FSGEKFAIGVMKKDGSQERLLVEDS 390
                                                     I        Q +     S
Sbjct: 139 QKELTCEEKQQIKKDKQKEPLVVNRLKYKSDAKGFHDDSNIQIIEYHLTTKQFKQWTTKS 198

Query: 391 NLQAP-TWSPSGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLIN 432
              +    S  G+ L+FS       D    S L+ ++L+ +  TL+ 
Sbjct: 199 TDHSLHDISTDGKKLVFSSNWSEEADSQLISDLFLLNLHTQEFTLLT 245



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 50/332 (15%), Positives = 102/332 (30%), Gaps = 79/332 (23%)

Query: 172 DFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             N+R  +VS  V       S +   D      +  T  +       R +P+  +  + +
Sbjct: 26  ASNNRFTYVSTKVNEDNEYESHVYSTDISTNQTKQWTFGKHSNTNF-RINPSNTQAVFQS 84

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-------------- 276
                  +++L+D      PK+I  F+    +PR++ +G     S               
Sbjct: 85  TRSG-TSQLWLIDLD-GGEPKQITFFQKGAYSPRWAPDGSSIFFSAPLNTDDDIHSQKEL 142

Query: 277 -------------------------------QKDEAMDIYSVDLQSNATERLTNTLFINI 305
                                            D  + I    L +   ++ T     + 
Sbjct: 143 TCEEKQQIKKDKQKEPLVVNRLKYKSDAKGFHDDSNIQIIEYHLTTKQFKQWTTKSTDHS 202

Query: 306 SASYSPDSSQIVFESDREGK------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               S D  ++VF S+   +        L+++  +  +   ++ D  ++Y++  +S    
Sbjct: 203 LHDISTDGKKLVFSSNWSEEADSQLISDLFLLNLHTQEFTLLT-DGNSNYYNSRFSSDSS 261

Query: 360 LIA-----FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ----------------APTWS 398
            I      F         + + +    + + +    ++Q                 P WS
Sbjct: 262 QIITFGHDFDYAGATLTKLYLFELSSKERKEITNQWDIQLGDAMITDSRLGESEDGPIWS 321

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             G+S+ F     G T   LY  DL G  E +
Sbjct: 322 KDGKSIYFLGTDQGAT--SLYQTDLEGNLEKV 351



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 87/280 (31%), Gaps = 61/280 (21%)

Query: 212 QILFEPRFSPNQQKVAYATY----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           +IL  P ++ +  +  Y +     D+E    VY  D   ++  K+    +      R + 
Sbjct: 17  EILSGPTYTASNNRFTYVSTKVNEDNEYESHVYSTDISTNQ-TKQWTFGKHSNTNFRINP 75

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------- 319
           +  +A+    +     ++ +DL     +++T       S  ++PD S I F         
Sbjct: 76  SNTQAVFQSTRSGTSQLWLIDLDGGEPKQITFFQKGAYSPRWAPDGSSIFFSAPLNTDDD 135

Query: 320 --------------------------------SDREG-----KEQLYVMQSNGSDQKRIS 342
                                           SD +G       Q+          K+ +
Sbjct: 136 IHSQKELTCEEKQQIKKDKQKEPLVVNRLKYKSDAKGFHDDSNIQIIEYHLTTKQFKQWT 195

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVED-SNLQAP 395
             K   +     S  G  + F+    E+        + ++     +  LL +  SN    
Sbjct: 196 T-KSTDHSLHDISTDGKKLVFSSNWSEEADSQLISDLFLLNLHTQEFTLLTDGNSNYYNS 254

Query: 396 TWSPSGRSLIFSR---KKDGDTGSKLYSIDLNGRNETLIN 432
            +S     +I         G T +KLY  +L+ +    I 
Sbjct: 255 RFSSDSSQIITFGHDFDYAGATLTKLYLFELSSKERKEIT 294



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 103/295 (34%), Gaps = 73/295 (24%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--------- 230
           V +S  SG   + L ++D DG   + +T  +    + PR++P+   + ++          
Sbjct: 81  VFQSTRSGT--SQLWLIDLDGGEPKQITFFQKG-AYSPRWAPDGSSIFFSAPLNTDDDIH 137

Query: 231 -----------------------------------YDDEDILRVYLMDTRIDRAPKRIGN 255
                                              + D+  +++        +  +    
Sbjct: 138 SQKELTCEEKQQIKKDKQKEPLVVNRLKYKSDAKGFHDDSNIQIIEYHLTTKQFKQWTTK 197

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASY 309
                L    S++GK+ + S    E  D      ++ ++L +     LT+      ++ +
Sbjct: 198 STDHSLH-DISTDGKKLVFSSNWSEEADSQLISDLFLLNLHTQEFTLLTDGNSNYYNSRF 256

Query: 310 SPDSSQIV-----FESDREGKEQLYVMQSNGSDQKRISQDKEASYFD------------- 351
           S DSSQI+     F+       +LY+ + +  ++K I+   +    D             
Sbjct: 257 SSDSSQIITFGHDFDYAGATLTKLYLFELSSKERKEITNQWDIQLGDAMITDSRLGESED 316

Query: 352 -PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            P+WS  G  I F        ++     +G+ E++   D+++   T+ P   S I
Sbjct: 317 GPIWSKDGKSIYFLGTDQGATSLYQTDLEGNLEKVYGADNHVFGFTYYPDEESFI 371


>gi|257386220|ref|YP_003175993.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halomicrobium mukohataei DSM 12286]
 gi|257168527|gb|ACV46286.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halomicrobium mukohataei DSM 12286]
          Length = 617

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 65/191 (34%), Gaps = 12/191 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQIVFES 320
             S +G    +   +    +++ VD+ +    R ++            +  D  ++ F  
Sbjct: 19  TVSPDGNEVAVYYDETGRNELHVVDVATGERTRWSDGEVPRNARWHVEWGADGDRVFFHL 78

Query: 321 DREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           D +G EQ  +Y +  +GS +  +  D +    D      G+ +     +  +  +     
Sbjct: 79  DDDGNEQNDVYAIARDGSVEPVVQLDGQTVLQDVG--EDGETLLVGSTASGQMQLYRHDC 136

Query: 379 DGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLI---NT 433
              +   L E D  + A   SP    + ++  +      +  Y  D +G N+  +    T
Sbjct: 137 ATGETTQLTEYDRAVGAGVLSPDCERIAYATNETDTFENTDTYVADADGSNQRNLEIGET 196

Query: 434 PAYASDPQWVG 444
            A      W  
Sbjct: 197 GAEVGPVDWGP 207



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 92/258 (35%), Gaps = 9/258 (3%)

Query: 188 IIKNSLCVMD-RDGANIRYLTPSRDQIL-FEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             +N L V+D   G   R+      +   +   +  +  +V +   DD +     +    
Sbjct: 34  TGRNELHVVDVATGERTRWSDGEVPRNARWHVEWGADGDRVFFHLDDDGNEQN-DVYAIA 92

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            D + + +       +      +G+  L+       M +Y  D  +  T +LT       
Sbjct: 93  RDGSVEPVVQLDGQTVLQDVGEDGETLLVGSTASGQMQLYRHDCATGETTQLTEYDRAVG 152

Query: 306 SASYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLI 361
           +   SPD  +I + ++          YV  ++GS+Q+ +   +  +   PV W P GD +
Sbjct: 153 AGVLSPDCERIAYATNETDTFENTDTYVADADGSNQRNLEIGETGAEVGPVDWGPDGDRL 212

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             T  + +    GV      +      + +  A ++ P G    F   +  +   ++   
Sbjct: 213 LVTDNTADLGRCGVYDLSTDEVTWYGGEFDEDAESFLPGGDR--FLAVRTRECAKEVVVY 270

Query: 422 DLNGRNETLINTPAYASD 439
           D      T ++ P+  + 
Sbjct: 271 DARTGAATTLDLPSGVAS 288



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 70/221 (31%), Gaps = 9/221 (4%)

Query: 212 QILFEPRFSPNQQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
                   SP+  +VA Y      + L V  + T            R+      + ++G 
Sbjct: 13  PTFHHATVSPDGNEVAVYYDETGRNELHVVDVATGERTRWSDGEVPRNARWHVEWGADGD 72

Query: 271 RALISVQKDEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           R    +  D         +    + E +       +      D   ++  S   G+ QLY
Sbjct: 73  RVFFHLDDDGNEQNDVYAIARDGSVEPVVQLDGQTVLQDVGEDGETLLVGSTASGQMQLY 132

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERLL 386
                  +  +++ + + +    V SP  + IA+     + F      V   DGS +R L
Sbjct: 133 RHDCATGETTQLT-EYDRAVGAGVLSPDCERIAYATNETDTFENTDTYVADADGSNQRNL 191

Query: 387 --VEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              E      P  W P G  L+ +          +Y +  +
Sbjct: 192 EIGETGAEVGPVDWGPDGDRLLVTDNTADLGRCGVYDLSTD 232


>gi|145512722|ref|XP_001442277.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409550|emb|CAK74880.1| unnamed protein product [Paramecium tetraurelia]
          Length = 490

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 103/317 (32%), Gaps = 45/317 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                    +  RLWDVK  +Q                 H   D +        G     
Sbjct: 71  TTLASGSEDISIRLWDVKTGQQKAKLD-----------GHI--DQVLSVCFSPDGIIL-- 115

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                    SG    S+ + D      +         +    FSP+   +A  + D    
Sbjct: 116 --------ASGSGDKSIRLWDVRIGQQKAKQDGHSDYVMSVNFSPDGTTLASGSGDK--- 164

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D    +   ++     +  A  FS NG   +++    +++ ++  D+++   + 
Sbjct: 165 -SIRLWDVNTGQQKAKLDANYEIEYA-CFSPNGT--ILAASCYQSIQLW--DIKTGQQKA 218

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L   L       +SPD + +   S     + + +       QK +  D     +   +S
Sbjct: 219 KLDGHLNYVFKICFSPDGTTLASCSS---DKSIRLWDVKAGQQKAVFDDHSDMGYTICFS 275

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGD 413
           P G  +A + ++    +I +      Q++  ++          +SP G +L       GD
Sbjct: 276 PDGSTLASSIYN----SIHLWDAKTGQQQTQLDGHTYYVRITCFSPDGTTLA---SGSGD 328

Query: 414 TGSKLYSIDLNGRNETL 430
              + +++    +   L
Sbjct: 329 KSIRFWNVKTGQQKAKL 345



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 109/314 (34%), Gaps = 52/314 (16%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             RLWDV+  +Q   +             H  SD +        G           ++ S
Sbjct: 123 SIRLWDVRIGQQKAKQD-----------GH--SDYVMSVNFSPDG----------TTLAS 159

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    S+ + D +    +    +  +I +   FSPN   +A + Y       + L D + 
Sbjct: 160 GSGDKSIRLWDVNTGQQKAKLDANYEIEYA-CFSPNGTILAASCYQ-----SIQLWDIKT 213

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINI 305
            +   ++    + +    FS +G     S   D+++ ++  D+++   + +  +   +  
Sbjct: 214 GQQKAKLDGHLNYVFKICFSPDGTTLA-SCSSDKSIRLW--DVKAGQQKAVFDDHSDMGY 270

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  +SPD S +           +++  +    Q+              +SP G  +A   
Sbjct: 271 TICFSPDGSTLA----SSIYNSIHLWDAKTGQQQTQLDGHTYYVRITCFSPDGTTLA--- 323

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSID- 422
                 +I        Q++  +E  + +  +  +SP G +L        D   +L+ +  
Sbjct: 324 SGSGDKSIRFWNVKTGQQKAKLEGHSNEILSVNFSPDGTTLA---SGSSDCSIRLWDVKT 380

Query: 423 ------LNGRNETL 430
                 L+G  + +
Sbjct: 381 GQQKAQLDGHFQRV 394



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 88/231 (38%), Gaps = 19/231 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D +    +         ++   FSP+   +A  + D    + + L D +  +   +
Sbjct: 40  IHLWDVETGQYKAKLEGHSSAIYSINFSPDGTTLASGSED----ISIRLWDVKTGQQKAK 95

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      +L+  FS +G   L S   D+++ ++ V +     ++        +S ++SPD
Sbjct: 96  LDGHIDQVLSVCFSPDG-IILASGSGDKSIRLWDVRIGQQKAKQ-DGHSDYVMSVNFSPD 153

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            + +   S   G + + +   N   QK    D         +SP G ++A + +     +
Sbjct: 154 GTTLASGS---GDKSIRLWDVNTGQQKA-KLDANYEIEYACFSPNGTILAASCYQ----S 205

Query: 373 IGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSI 421
           I +      Q++  ++          +SP G +L        D   +L+ +
Sbjct: 206 IQLWDIKTGQQKAKLDGHLNYVFKICFSPDGTTLA---SCSSDKSIRLWDV 253



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 93/284 (32%), Gaps = 33/284 (11%)

Query: 108 AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGK--KFFSSPASWRKIAHTISDD 161
           +  +++     +G            RLWDV   +Q       +    A +      ++  
Sbjct: 142 SDYVMSVNFSPDGTTLASGSGDKSIRLWDVNTGQQKAKLDANYEIEYACFSPNGTILAAS 201

Query: 162 IYQSIT---------GEKGDFNSRILFVSESVVSGII------KNSLCVMDRDGANIRYL 206
            YQSI            K D +   +F       G          S+ + D      + +
Sbjct: 202 CYQSIQLWDIKTGQQKAKLDGHLNYVFKICFSPDGTTLASCSSDKSIRLWDVKAGQQKAV 261

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                 + +   FSP+   +A + Y+      ++L D +  +   ++      +    FS
Sbjct: 262 FDDHSDMGYTICFSPDGSTLASSIYN-----SIHLWDAKTGQQQTQLDGHTYYVRITCFS 316

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGK 325
            +G     S   D+++  +  ++++   + +L       +S ++SPD + +   S     
Sbjct: 317 PDGTTLA-SGSGDKSIRFW--NVKTGQQKAKLEGHSNEILSVNFSPDGTTLASGSS---D 370

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             + +       QK              +SP GD++A       
Sbjct: 371 CSIRLWDVKTGQQKAQLDGHFQRVRSVCFSPDGDILASGSEDNT 414



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 81/212 (38%), Gaps = 19/212 (8%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +A +  D    + ++L D    +   ++    S I +  FS +G     S  +D 
Sbjct: 26  PDGATLASSDGD----ILIHLWDVETGQYKAKLEGHSSAIYSINFSPDGTTLA-SGSEDI 80

Query: 281 AMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++ ++  D+++   + +L   +   +S  +SPD   +   S   G + + +       QK
Sbjct: 81  SIRLW--DVKTGQQKAKLDGHIDQVLSVCFSPDGIILASGS---GDKSIRLWDVRIGQQK 135

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWS 398
                         +SP G  +A         +I +   +  Q++  L  +  ++   +S
Sbjct: 136 AKQDGHSDYVMSVNFSPDGTTLA---SGSGDKSIRLWDVNTGQQKAKLDANYEIEYACFS 192

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           P+G  L  S  +      +L+ I    +   L
Sbjct: 193 PNGTILAASCYQS----IQLWDIKTGQQKAKL 220


>gi|124005212|ref|ZP_01690054.1| dipeptidyl-peptidase [Microscilla marina ATCC 23134]
 gi|123989464|gb|EAY29025.1| dipeptidyl-peptidase [Microscilla marina ATCC 23134]
          Length = 790

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 83/215 (38%), Gaps = 28/215 (13%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSNGKRALISVQKDEAMDIYS 286
             D E +  +Y +        ++ G  ++  +   +P +S++GK+A++ ++  ++ D + 
Sbjct: 301 MVDFEQLAGIYDLPAYYKEYGRKPGKKKARKVIPHSPIWSADGKKAVMVIRSQDSKDRWI 360

Query: 287 V--DLQSNATERLTN--------TLFINISAS-----YSPDSSQIVFESDREGKEQLYVM 331
           V  +  +   + L             I+ +       + PD+ ++ F+S++ G   LY +
Sbjct: 361 VLLNASTGKLKLLNRQRNEAWIGGPGISWNFFMGNVGWMPDNQRVYFQSEKTGYSHLYTV 420

Query: 332 QSNGSDQKRISQDKEASYFDPVW-SPQGDL--IAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             N    K ++Q K        W S       +   +     + +  M   G +   +  
Sbjct: 421 NVNNGKTKALTQGKF--EVTEAWISRDKKWWYLRTNEVHPGVYHVYKMPLKGGKRTQITT 478

Query: 389 DSNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSI 421
            +     T SP      +++S     +T  +LY +
Sbjct: 479 KTGFNNVTLSPDETQAAVLYSNT---NTPPELYLM 510



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 86/262 (32%), Gaps = 31/262 (11%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPR-- 264
           R  I   P +S + +K A      +D    +++         ++ N +     I  P   
Sbjct: 330 RKVIPHSPIWSADGKK-AVMVIRSQDSKDRWIVLLNASTGKLKLLNRQRNEAWIGGPGIS 388

Query: 265 ---------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                    +  + +R     +K     +Y+V++ +  T+ LT   F    A  S D   
Sbjct: 389 WNFFMGNVGWMPDNQRVYFQSEKTGYSHLYTVNVNNGKTKALTQGKFEVTEAWISRDKKW 448

Query: 316 IVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFA 372
               ++    G   +Y M   G  + +I+      + +   SP     A     +     
Sbjct: 449 WYLRTNEVHPGVYHVYKMPLKGGKRTQITTKT--GFNNVTLSPDETQAAVLYSNTNTPPE 506

Query: 373 IGVM-KKDGSQERLLVE--DSNLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLN---G 425
           + +M  K  +Q   + +   S  +   W +P    + F  +      +++Y        G
Sbjct: 507 LYLMPNKAKAQAVKITDSRTSAFKQYAWLAP--EIISFKARDGATVYARVYRPKTAPKQG 564

Query: 426 RNETLINTPAYASDPQ--WVGF 445
           +    ++   Y  +    W  +
Sbjct: 565 KAAIFVHGAGYLQNAHKGWSSY 586



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 55/153 (35%), Gaps = 14/153 (9%)

Query: 203 IRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDI----LRVYLMDTRIDRAPKRIGN 255
           I  +      I + P    ++ +  KV +     +        V + D ++   P++I  
Sbjct: 32  IDQIMEGEKFIGYAPSRIFWAEDGSKVYFHWNPKQAPQGALYGVKIRDGKVVGKPEKISK 91

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                +  RF   G       QK    +      ++    ++T+T     + S+S D   
Sbjct: 92  NELANMPDRF---GNYNKARTQKVYTQNGDVYWHKNGKIRQITHTTAQESNVSFSGDEKS 148

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +V++   +G   L+    +    K+++  K  +
Sbjct: 149 LVYQ---QGNN-LFEWSLSDGSLKQLTNFKSGN 177


>gi|21221008|ref|NP_626787.1| protease [Streptomyces coelicolor A3(2)]
 gi|20140898|sp|Q9RDE2|TRI1_STRCO RecName: Full=Tricorn protease homolog 1
 gi|6714763|emb|CAB66227.1| possible protease [Streptomyces coelicolor A3(2)]
          Length = 1067

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 100/280 (35%), Gaps = 24/280 (8%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +T        R       +V+   ++ + +   DG    +   + +  +  PR SP+  K
Sbjct: 3   VTQPAAPAYLRFPHPHGELVAFTAEDDVWLAPLDGGRA-WRVSADNVPVNHPRISPDGTK 61

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKD---EA 281
           VA+ +  D     V++         KR+ ++ S+    R ++++G+   +S         
Sbjct: 62  VAWTSTRDG-APEVHVAPVE-GGPAKRLTHWGSIRTQVRGWTADGRVLALSTYGQASLRR 119

Query: 282 MDIYSVDLQSNATERLTNTLFINI--SASY----SPDSSQIVFE-SDREGK-EQLYVMQS 333
               ++ L       L      ++          +P   +  +    R G   +L++ + 
Sbjct: 120 SWARALPLDGGPATTLPYGPVGDVAQGPHTVLLSAPMGREAAWWKRYRGGTAGKLWIDRE 179

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +  +  R+    + +   P W   GD IAF        A+     DGS  R         
Sbjct: 180 DDGEFVRLHDGLDGNIEYPFWV--GDRIAFLSDHEGTGALYSSLADGSDLRRHTPVDGFY 237

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLIN 432
           A   +  G  ++++         +L+++ DL+G     ++
Sbjct: 238 ARHAATDGSRVVYAS------AGELWTLDDLDGAEPRRLD 271



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 68/192 (35%), Gaps = 20/192 (10%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+    + + D    ++   L      R++           SPD +++ + S R+G  
Sbjct: 17  PHGELVAFTAEDD----VWLAPLDGGRAWRVSADNVPVNHPRISPDGTKVAWTSTRDGAP 72

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQE 383
           +++V    G   KR++           W+  G ++A + +            +  DG   
Sbjct: 73  EVHVAPVEGGPAKRLTHWGSIRTQVRGWTADGRVLALSTYGQASLRRSWARALPLDGGPA 132

Query: 384 RLL--------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNETL-IN 432
             L         +  +    + +P GR   + ++  G T  KL+ ID   +G    L   
Sbjct: 133 TTLPYGPVGDVAQGPHTVLLS-APMGREAAWWKRYRGGTAGKLW-IDREDDGEFVRLHDG 190

Query: 433 TPAYASDPQWVG 444
                  P WVG
Sbjct: 191 LDGNIEYPFWVG 202



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 94/306 (30%), Gaps = 25/306 (8%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYL--------T 207
           +++D            F +R      S V       L  +D  DGA  R L         
Sbjct: 220 SLADGSDLRRHTPVDGFYARHAATDGSRVVYASAGELWTLDDLDGAEPRRLDIRLGGARV 279

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPR-F 265
             +   +   R+  +      A      +       T      + +     +    PR F
Sbjct: 280 DLQSYPVNAARWFGSASPDHTARGSAVAVRGGVHWVTHRSGPARALAATPGVRNRLPRTF 339

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSN-----ATERLTNT-LFINISASYSPDSSQIVFE 319
             +G+  ++ V   E  D       +         RL    L   +  + +PD S++   
Sbjct: 340 RVDGEEWVVWVTDAEGDDALEFAPATGLAPGATARRLAAGQLGRVLHLAVAPDGSRVAVA 399

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKK 378
           S      ++ +++    + + + + ++      V+SP    +A++    E    + +   
Sbjct: 400 SH---DGRVLLVERESGEVREVDRSEDGDASGLVFSPDSSWLAWSHPGPEPLRQLKLANT 456

Query: 379 -DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLINTP 434
            D S            +P ++  G+ L F   +  D     +  DL    G    LI   
Sbjct: 457 TDLSVSEATPLRFKDYSPAFTLDGKHLAFLSTRSFDPVYDEHVFDLAFVEGARPYLITLA 516

Query: 435 AYASDP 440
           A    P
Sbjct: 517 ATTPSP 522



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/254 (19%), Positives = 102/254 (40%), Gaps = 36/254 (14%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---- 230
            RI F+S+   +G + +SL     DG+++R  TP             +  +V YA+    
Sbjct: 203 DRIAFLSDHEGTGALYSSL----ADGSDLRRHTPVDGFYARHAA--TDGSRVVYASAGEL 256

Query: 231 --YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----SSNG--KRALISVQKDEAM 282
              DD D      +D R+  A   + ++   + A R+    S +   + + ++V+     
Sbjct: 257 WTLDDLDGAEPRRLDIRLGGARVDLQSYP--VNAARWFGSASPDHTARGSAVAVRGG--- 311

Query: 283 DIYSVDLQSNATERLTNTLFI-NISA-SYSPDSS-QIVFESDREGKEQLYVMQS----NG 335
            ++ V  +S     L  T  + N    ++  D    +V+ +D EG + L    +     G
Sbjct: 312 -VHWVTHRSGPARALAATPGVRNRLPRTFRVDGEEWVVWVTDAEGDDALEFAPATGLAPG 370

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQ 393
           +  +R++  +         +P G  +A     G    + +++++  + R +   ED +  
Sbjct: 371 ATARRLAAGQLGRVLHLAVAPDGSRVAVASHDG---RVLLVERESGEVREVDRSEDGDAS 427

Query: 394 APTWSPSGRSLIFS 407
              +SP    L +S
Sbjct: 428 GLVFSPDSSWLAWS 441


>gi|302543389|ref|ZP_07295731.1| WD-40 repeat protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302461007|gb|EFL24100.1| WD-40 repeat protein [Streptomyces himastatinicus ATCC 53653]
          Length = 1319

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/301 (16%), Positives = 101/301 (33%), Gaps = 25/301 (8%)

Query: 160 DDIYQSITGEKGDFNSR-------ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           D +++ +  E   F  R       +  V+  +          ++    A +         
Sbjct: 611 DAVFEQVVTEADRFEYRDPSLSAQLALVAHRLRPDDEATKNRLISIVNAPLATPLLGHTG 670

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            ++   FSP+ + +A A YD    L      TR     K +    S + +  FS +G+  
Sbjct: 671 AVYLTSFSPDGKTLATAAYDRTVRLWDTSDPTRPKPLGKPLTGHTSWVSSAVFSPDGRTL 730

Query: 273 LISVQKDEAMDIYSVDLQSNATE----RLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
             S   D  + ++ V             L+         ++SPD   +   +D + K +L
Sbjct: 731 A-SAGDDGTVRLWDVS-DPRHPRPLGAPLSGHDGTIYLLAFSPDGKTLAAATD-DSKVRL 787

Query: 329 YVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM----KKDGSQE 383
           + M+  G  +         A+     +SP G ++A          +  M          +
Sbjct: 788 WDMRGRGRPKPLGALTGATAAVRSVAFSPDGKMLA-GGGDDGTIRLWNMADPRHPKRIGK 846

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQW 442
            L      + +  +SP GR+L        D   +L+ +  + R    + +P    + P W
Sbjct: 847 ALTGHTDLIHSVAFSPDGRTLA---SGAADNTIRLWDV-GDPRRAEPLGSPLTGHTGPVW 902

Query: 443 V 443
            
Sbjct: 903 S 903



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 52/318 (16%), Positives = 93/318 (29%), Gaps = 46/318 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDV-KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
            G+ +    D  +V  RLWD+    +         + A+ R +A               G 
Sbjct: 773  GKTLAAATDDSKV--RLWDMRGRGRPKPLGALTGATAAVRSVA-----------FSPDGK 819

Query: 173  FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL---TPSRDQILFEPRFSPNQQKVAYA 229
                      +         L  M  D  + + +         ++    FSP+ + +A  
Sbjct: 820  --------MLAGGGDDGTIRLWNM-ADPRHPKRIGKALTGHTDLIHSVAFSPDGRTLASG 870

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
              D+   L       R +     +      + +  FS +G     + Q   A      D 
Sbjct: 871  AADNTIRLWDVGDPRRAEPLGSPLTGHTGPVWSVAFSPDGNMLAAASQDSTASLWNVQDP 930

Query: 290  Q--SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
               S   E L        +  +SPD   +   S   G   + +     SD          
Sbjct: 931  AYPSQVGEPLAGASGEMYALGFSPDGRTLATGS---GDNTVRLWSIPTSDMIG------- 980

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQ--APTWSPSGRSL 404
                  + P G ++A      +     V K                +   PT+SP GR  
Sbjct: 981  --RVGAFRPDGRVLATAARDEKVRMWNVAKPGRPVPMGKPFSPGKGEVREPTFSPDGR-- 1036

Query: 405  IFSRKKDGDTGSKLYSID 422
            IF+    G +  +L+++ 
Sbjct: 1037 IFAVMTGG-SAVRLWNVS 1053



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 59/372 (15%), Positives = 116/372 (31%), Gaps = 41/372 (11%)

Query: 76   SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK-EGKDRLRVE------F 128
            S     +      + +         + W+   + ++  GRV       R+          
Sbjct: 944  SGEMYALGFSPDGRTLATGSGDNTVRLWSIPTSDMI--GRVGAFRPDGRVLATAARDEKV 1001

Query: 129  RLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            R+W+V    R   +GK F       R+   +    I+  +TG        +   +  V +
Sbjct: 1002 RMWNVAKPGRPVPMGKPFSPGKGEVREPTFSPDGRIFAVMTGGSAVRLWNVSDPAHPVPA 1061

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G                      R +      FSP+ + +A    D    L       R+
Sbjct: 1062 GPP-----------------LDVRARFAGALAFSPDGKTLASVYDDRTIQLWDVSDPKRV 1104

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTLFI 303
                  +   +  + A  FS +G+    S   D  + ++ V  +       + LT  L  
Sbjct: 1105 RPLGAPLTGHKGYVNALVFSPDGRMLA-SGSADNTIRLWKVTDRRRTVPLGKPLTGHLGP 1163

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLI 361
              + +YSPD   +   SD +   +L+ +       +  R       S      S  G  +
Sbjct: 1164 VNALAYSPDGDTLASGSD-DNTVRLWNIADPRRATRLGRPLTGHTDSIVSLTLSRDGTTL 1222

Query: 362  AFTKFSG--EKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKL 418
            A          + I V  K  +  + +  ++ +    ++SP    L  S    G    +L
Sbjct: 1223 ASGGNDNAVRLWDITVPSKADAIGQSMSPNAKIGNFLSFSPQSHMLGVSS---GADTVRL 1279

Query: 419  YSIDLNGRNETL 430
            + +D +     +
Sbjct: 1280 WDLDTDKAIRRV 1291


>gi|156139606|gb|ABU51103.1| unknown [uncultured bacterium Bio6]
          Length = 610

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 77/246 (31%), Gaps = 25/246 (10%)

Query: 185 VSGIIKNSLCVMD-----RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            +      L +       R G  ++    +      +PR+SP+  ++A+     +D    
Sbjct: 8   PNDSSSTELWLYPTGFGSRTGKPVKPRRLTAGDKDSDPRWSPDGTRIAFTAKRKDDAEAQ 67

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--- 296
             +         R+ +  +   A ++   GKR          +   +   +    +R   
Sbjct: 68  VYLIAPDGGEAVRLTSLPTGASAVKWFPGGKRIAFVSWVWPDLTSEAAQSKRYKEKREAA 127

Query: 297 ----LTNTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               LT          +  D  +  VF  D        V    G+       D  A ++D
Sbjct: 128 VKAHLTERGEYRYWDHWLTDGREPHVFACDVATGR--CVDLLAGTGVALQPWDPTAEHYD 185

Query: 352 PVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRS 403
              +P G  IA T           +  I V+     + + L   S    + P++SP GR 
Sbjct: 186 --IAPDGREIALTIDPASEPALMNRCDIVVVDLATRRAKNLTAKSGLSDEHPSYSPDGRY 243

Query: 404 LIFSRK 409
           + +   
Sbjct: 244 IAYHAY 249



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 53/376 (14%), Positives = 110/376 (29%), Gaps = 76/376 (20%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V +E  D    E  L+      +         P   R++  T  D          G   +
Sbjct: 4   VTQEPNDSSSTELWLYPTGFGSR------TGKPVKPRRL--TAGDKDSDPRWSPDG---T 52

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY---- 231
           RI F ++       +  + ++  DG     LT          ++ P  +++A+ ++    
Sbjct: 53  RIAFTAKR--KDDAEAQVYLIAPDGGEAVRLTSLPTGASAV-KWFPGGKRIAFVSWVWPD 109

Query: 232 ------------------------------------DDEDILRVYLMDTRIDRAPKRIGN 255
                                                D     V+  D    R    +  
Sbjct: 110 LTSEAAQSKRYKEKREAAVKAHLTERGEYRYWDHWLTDGREPHVFACDVATGRCVDLLA- 168

Query: 256 FRSMILAP--------RFSSNGKRALISVQKDEAM------DIYSVDLQSNATERLTNTL 301
              + L P          + +G+   +++            DI  VDL +   + LT   
Sbjct: 169 GTGVALQPWDPTAEHYDIAPDGREIALTIDPASEPALMNRCDIVVVDLATRRAKNLTAKS 228

Query: 302 FINIS-ASYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            ++    SYSPD   I + +         + QL ++     + +R++   + +     W+
Sbjct: 229 GLSDEHPSYSPDGRYIAYHAYDVARAFNDQGQLRLLTRKSGESRRVAPAFDRATNHLQWT 288

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P    +        +  +       +    L+    +     S  G  L+++R       
Sbjct: 289 PDASALLSLTEDRGRVGLWRHPLTDALPAALIHGGVISGYAQSGDGSVLVYTRDTA-RCP 347

Query: 416 SKLYSIDLNGRNETLI 431
             L++   +G  E  I
Sbjct: 348 PSLFAAAGDGTGERAI 363



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDP 440
           + R L        P WSP G  + F+ K+  D  +++Y I  +G     L + P  AS  
Sbjct: 32  KPRRLTAGDKDSDPRWSPDGTRIAFTAKRKDDAEAQVYLIAPDGGEAVRLTSLPTGASAV 91

Query: 441 QWVG 444
           +W  
Sbjct: 92  KWFP 95


>gi|289771715|ref|ZP_06531093.1| protease [Streptomyces lividans TK24]
 gi|289701914|gb|EFD69343.1| protease [Streptomyces lividans TK24]
          Length = 1067

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 100/280 (35%), Gaps = 24/280 (8%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +T        R       +V+   ++ + +   DG    +   + +  +  PR SP+  K
Sbjct: 3   VTQPAAPAYLRFPHPHGELVAFTAEDDVWLAPLDGGRA-WRVSADNVPVNHPRISPDGTK 61

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKD---EA 281
           VA+ +  D     V++         KR+ ++ S+    R ++++G+   +S         
Sbjct: 62  VAWTSTRDG-APEVHVAPVE-GGPAKRLTHWGSIRTQVRGWTADGRVLALSTYGQASLRR 119

Query: 282 MDIYSVDLQSNATERLTNTLFINI--SASY----SPDSSQIVFE-SDREGK-EQLYVMQS 333
               ++ L       L      ++          +P   +  +    R G   +L++ + 
Sbjct: 120 SWARALPLDGGPATTLPYGPVGDVAQGPHTVLLSAPMGREAAWWKRYRGGTAGKLWIDRE 179

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +  +  R+    + +   P W   GD IAF        A+     DGS  R         
Sbjct: 180 DDGEFVRLHDGLDGNIEYPFWV--GDRIAFLSDHEGTGALYSSLADGSDLRRHTPVDGFY 237

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLIN 432
           A   +  G  ++++         +L+++ DL+G     ++
Sbjct: 238 ARHAATDGSRVVYAS------AGELWTLDDLDGAEPRRLD 271



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 68/192 (35%), Gaps = 20/192 (10%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+    + + D    ++   L      R++           SPD +++ + S R+G  
Sbjct: 17  PHGELVAFTAEDD----VWLAPLDGGRAWRVSADNVPVNHPRISPDGTKVAWTSTRDGAP 72

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQE 383
           +++V    G   KR++           W+  G ++A + +            +  DG   
Sbjct: 73  EVHVAPVEGGPAKRLTHWGSIRTQVRGWTADGRVLALSTYGQASLRRSWARALPLDGGPA 132

Query: 384 RLL--------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNETL-IN 432
             L         +  +    + +P GR   + ++  G T  KL+ ID   +G    L   
Sbjct: 133 TTLPYGPVGDVAQGPHTVLLS-APMGREAAWWKRYRGGTAGKLW-IDREDDGEFVRLHDG 190

Query: 433 TPAYASDPQWVG 444
                  P WVG
Sbjct: 191 LDGNIEYPFWVG 202



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 94/306 (30%), Gaps = 25/306 (8%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYL--------T 207
           +++D            F +R      S V       L  +D  DGA  R L         
Sbjct: 220 SLADGSDLRRHTPVDGFYARHAATDGSRVVYASAGELWTLDDLDGAEPRRLDIRLGGARV 279

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPR-F 265
             +   +   R+  +      A      +       T      + +     +    PR F
Sbjct: 280 DLQSYPVNAARWFGSASPDHTARGSAVAVRGGVHWVTHRSGPARALAATPGVRTRLPRTF 339

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSN-----ATERLTNT-LFINISASYSPDSSQIVFE 319
             +G+  ++ V   E  D       +         RL    L   +  + +PD S++   
Sbjct: 340 RVDGEEWVVWVTDAEGDDALEFAPATGLAPGATARRLAAGQLGRVLHLAVAPDGSRVAVA 399

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKK 378
           S      ++ +++    + + + + ++      V+SP    +A++    E    + +   
Sbjct: 400 SH---DGRVLLVERESGEVREVDRSEDGDASGLVFSPDSSWLAWSHPGPEPLRQLKLANT 456

Query: 379 -DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLINTP 434
            D S            +P ++  G+ L F   +  D     +  DL    G    LI   
Sbjct: 457 TDLSVSEATPLRFKDYSPAFTLDGKHLAFLSTRSFDPVYDEHVFDLAFVEGARPYLITLA 516

Query: 435 AYASDP 440
           A    P
Sbjct: 517 ATTPSP 522



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 101/254 (39%), Gaps = 36/254 (14%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---- 230
            RI F+S+   +G + +SL     DG+++R  TP             +  +V YA+    
Sbjct: 203 DRIAFLSDHEGTGALYSSL----ADGSDLRRHTPVDGFYARHAA--TDGSRVVYASAGEL 256

Query: 231 --YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----SSNG--KRALISVQKDEAM 282
              DD D      +D R+  A   + ++   + A R+    S +   + + ++V+     
Sbjct: 257 WTLDDLDGAEPRRLDIRLGGARVDLQSYP--VNAARWFGSASPDHTARGSAVAVRGG--- 311

Query: 283 DIYSVDLQSNATERLTNTLFINISA--SYSPDSS-QIVFESDREGKEQLYVMQS----NG 335
            ++ V  +S     L  T  +      ++  D    +V+ +D EG + L    +     G
Sbjct: 312 -VHWVTHRSGPARALAATPGVRTRLPRTFRVDGEEWVVWVTDAEGDDALEFAPATGLAPG 370

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQ 393
           +  +R++  +         +P G  +A     G    + +++++  + R +   ED +  
Sbjct: 371 ATARRLAAGQLGRVLHLAVAPDGSRVAVASHDG---RVLLVERESGEVREVDRSEDGDAS 427

Query: 394 APTWSPSGRSLIFS 407
              +SP    L +S
Sbjct: 428 GLVFSPDSSWLAWS 441


>gi|17227779|ref|NP_484327.1| WD-40 repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17135261|dbj|BAB77807.1| WD-40 repeat protein [Nostoc sp. PCC 7120]
          Length = 1747

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 84/243 (34%), Gaps = 14/243 (5%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ +    N++ + D     +          +    F P+ Q +A  + D      + +
Sbjct: 1489 KTIATASADNTIKLWDSQTQQLIKTLTGHKDRITTLSFHPDNQTIASGSADK----TIKI 1544

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                  +  + +      + +  FS +G+    S   D  + I+  D      + +T   
Sbjct: 1545 WRVNDGQLLRTLTGHNDEVTSVNFSPDGQFLA-SGSTDNTVKIWQTD--GRLIKNITGHG 1601

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S  +SPDS  +   S       + + Q                     +SP G+++
Sbjct: 1602 LAIASVKFSPDSHTLASAS---WDNTIKLWQVTDGKLINNLNGHIDGVTSLSFSPDGEIL 1658

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            A +  +     +  +      + LL     +    +SP G++L+       D G  ++++
Sbjct: 1659 A-SGSADNTIKLWNLPNATLLKTLLGHPGKINTLAFSPDGKTLL---SGGEDAGVMVWNL 1714

Query: 422  DLN 424
            DL+
Sbjct: 1715 DLD 1717



 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 52/269 (19%), Positives = 107/269 (39%), Gaps = 30/269 (11%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S+++VS  +  ++ +   DG+ I     + +  +    FSP+ + +A       +   V 
Sbjct: 1243 SKTIVSSSLDKTIKLWRIDGSIINTW-NAHNGWVNSISFSPDGKMIA----SGGEDNLVK 1297

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            L         K +   +  I + +FS +GK  L S   D+ +  +  +      + +   
Sbjct: 1298 LWQATNGHLIKTLTGHKERITSVKFSPDGK-ILASASGDKTIKFW--NTDGKFLKTIAAH 1354

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++S DS  +V          + V + +G+  K IS   E    D  +SP   +
Sbjct: 1355 NQQVNSINFSSDSKTLV---SAGADSTMKVWKIDGTLIKTISGRGEQ-IRDVTFSPDNKV 1410

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY- 419
            IA +  S +   I  +    SQ+      SN+ + +++P G++         D    ++ 
Sbjct: 1411 IA-SASSDKTVRIRQLNYQKSQK------SNVNSVSFNPDGKTFA---SAGWDGNITIWQ 1460

Query: 420  -------SIDLNGRNETLINTPAYASDPQ 441
                   S+    +N+ +I T +Y+ D +
Sbjct: 1461 RETLAHSSLSTIQKNQNIITTVSYSPDGK 1489



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 84/227 (37%), Gaps = 16/227 (7%)

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               I+    +SP+ + +A A+ D+     + L D++  +  K +   +  I    F  + 
Sbjct: 1475 NQNIITTVSYSPDGKTIATASADN----TIKLWDSQTQQLIKTLTGHKDRITTLSFHPDN 1530

Query: 270  KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +    S   D+ + I+ V+        LT       S ++SPD     F +       + 
Sbjct: 1531 QTIA-SGSADKTIKIWRVN-DGQLLRTLTGHNDEVTSVNFSPDGQ---FLASGSTDNTVK 1585

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            + Q++G   K I+    A      +SP    +A   +      +     DG     L   
Sbjct: 1586 IWQTDGRLIKNITGHGLAIASVK-FSPDSHTLASASWDNT-IKLW-QVTDGKLINNLNGH 1642

Query: 390  SN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
             + + + ++SP G  L        D   KL+++      +TL+  P 
Sbjct: 1643 IDGVTSLSFSPDGEILA---SGSADNTIKLWNLPNATLLKTLLGHPG 1686



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 78/211 (36%), Gaps = 17/211 (8%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             F+P+ +  A A +D    + ++  +T    +   I   +++I    +S +GK    +  
Sbjct: 1439 SFNPDGKTFASAGWD--GNITIWQRETLAHSSLSTIQKNQNIITTVSYSPDGKTIA-TAS 1495

Query: 278  KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  + ++  D Q+    + LT       + S+ PD+  I   S     + + + + N  
Sbjct: 1496 ADNTIKLW--DSQTQQLIKTLTGHKDRITTLSFHPDNQTIASGS---ADKTIKIWRVNDG 1550

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               R             +SP G  +A          + + + DG   + +       A  
Sbjct: 1551 QLLRTLTGHNDEVTSVNFSPDGQFLASGSTDNT---VKIWQTDGRLIKNITGHGLAIASV 1607

Query: 397  -WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             +SP   +L  +     D   KL+ +  +G+
Sbjct: 1608 KFSPDSHTLASASW---DNTIKLWQV-TDGK 1634



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 70/210 (33%), Gaps = 27/210 (12%)

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            +       +   R+      + A  FS +GK    S   D  + ++  D+       +T 
Sbjct: 1120 FQQAIANTQEINRLQGHAQQVNAVSFSPDGKVLA-SASDDRTVKLW--DIHGQLITTITA 1176

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--------SQDKEAS-YF 350
            +     + ++S +   +   ++ +   +LY + ++      +        +         
Sbjct: 1177 SQKRVTAIAFSHNGKYLA-TANADYTIKLYALDTSCLIVNNLQKCIQLIKTFPGHTDIVT 1235

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRK 409
            D V+SP    I  +        I + + DGS        +  + + ++SP G+ +     
Sbjct: 1236 DVVFSPDSKTIVSSSLDKT---IKLWRIDGSIINTWNAHNGWVNSISFSPDGKMIA---S 1289

Query: 410  KDGDTGSKLYSI-------DLNGRNETLIN 432
               D   KL+          L G  E + +
Sbjct: 1290 GGEDNLVKLWQATNGHLIKTLTGHKERITS 1319



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 93/270 (34%), Gaps = 40/270 (14%)

Query: 201  ANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            AN + +       Q +    FSP+ + +A A+ D      V L D    +    I   + 
Sbjct: 1125 ANTQEINRLQGHAQQVNAVSFSPDGKVLASASDDR----TVKLWDIH-GQLITTITASQK 1179

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTN-------TLFINISAS 308
             + A  FS NGK    +   D  + +Y++D      N  ++             I     
Sbjct: 1180 RVTAIAFSHNGKYLA-TANADYTIKLYALDTSCLIVNNLQKCIQLIKTFPGHTDIVTDVV 1238

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPDS  IV  S  +   +L+ +                      +SP G +IA +    
Sbjct: 1239 FSPDSKTIV-SSSLDKTIKLWRID---GSIINTWNAHNGWVNSISFSPDGKMIA-SGGED 1293

Query: 369  EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR--------KKDGDTGSKLY 419
                +     +G   + L      + +  +SP G+ L  +           DG     + 
Sbjct: 1294 NLVKLW-QATNGHLIKTLTGHKERITSVKFSPDGKILASASGDKTIKFWNTDGKFLKTIA 1352

Query: 420  -------SIDLNGRNETLINTPAYASDPQW 442
                   SI+ +  ++TL++  A ++   W
Sbjct: 1353 AHNQQVNSINFSSDSKTLVSAGADSTMKVW 1382



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 72/203 (35%), Gaps = 17/203 (8%)

Query: 89   QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
            Q I +  +    + W     Q+L T  +     +   V F      D + +      ++ 
Sbjct: 1531 QTIASGSADKTIKIWRVNDGQLLRT--LTGHNDEVTSVNFS----PDGQFLASGSTDNTV 1584

Query: 149  ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLT 207
              W+     I +     +      F+      S ++ S    N++ +    DG  I  L 
Sbjct: 1585 KIWQTDGRLIKNITGHGLAIASVKFSPD----SHTLASASWDNTIKLWQVTDGKLINNLN 1640

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               D +     FSP+ + +A  + D+     + L +       K +      I    FS 
Sbjct: 1641 GHIDGVTSL-SFSPDGEILASGSADN----TIKLWNLPNATLLKTLLGHPGKINTLAFSP 1695

Query: 268  NGKRALISVQKDEAMDIYSVDLQ 290
            +GK  L S  +D  + ++++DL 
Sbjct: 1696 DGKTLL-SGGEDAGVMVWNLDLD 1717


>gi|261819407|ref|YP_003257513.1| hypothetical protein Pecwa_0037 [Pectobacterium wasabiae WPP163]
 gi|261603420|gb|ACX85906.1| conserved hypothetical protein [Pectobacterium wasabiae WPP163]
          Length = 428

 Score = 82.4 bits (202), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 52/148 (35%), Gaps = 20/148 (13%)

Query: 280 EAMDIYSVDLQSNATERLT-----NTLFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                  V        RLT         +      +   SPD  +I F   D  G  QL+
Sbjct: 274 GTATSMPVPPAGVQQRRLTFTHQRRYPGLVNQPRHWLRSSPDGGEIAFLMRDEAGVAQLW 333

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +  NG + ++++  +        W P G  +AF   +    +I +      +   +   
Sbjct: 334 AISPNGGEPRQVTHTEHGVQSAFNWHPDGRSLAFVCDN----SIMLCDAKSGELVRMTA- 388

Query: 390 SNLQAPT-----WSPSGRSLIFSRKKDG 412
               AP+     +SP G+ + + R+ DG
Sbjct: 389 RTDNAPSADAVVFSPDGKHIAYMREIDG 416



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 51/129 (39%), Gaps = 12/129 (9%)

Query: 256 FRSMILAPR-F---SSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTL-FINISASY 309
           +  ++  PR +   S +G      ++ +     ++++        ++T+T   +  + ++
Sbjct: 299 YPGLVNQPRHWLRSSPDGGEIAFLMRDEAGVAQLWAISPNGGEPRQVTHTEHGVQSAFNW 358

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS 367
            PD   + F  D      + +  +   +  R++   +   S    V+SP G  IA+ +  
Sbjct: 359 HPDGRSLAFVCDNS----IMLCDAKSGELVRMTARTDNAPSADAVVFSPDGKHIAYMREI 414

Query: 368 GEKFAIGVM 376
                + V+
Sbjct: 415 DGFNQLFVV 423



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 49/131 (37%), Gaps = 11/131 (8%)

Query: 208 PSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                ++ +PR     SP+  ++A+   D+  + +++ +        +       +  A 
Sbjct: 297 RRYPGLVNQPRHWLRSSPDGGEIAFLMRDEAGVAQLWAISPNGGEPRQVTHTEHGVQSAF 356

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFES 320
            +  +G+             I   D +S    R+T       SA    +SPD   I +  
Sbjct: 357 NWHPDGRSLAFVCDNS----IMLCDAKSGELVRMTARTDNAPSADAVVFSPDGKHIAYMR 412

Query: 321 DREGKEQLYVM 331
           + +G  QL+V+
Sbjct: 413 EIDGFNQLFVV 423



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 35/96 (36%), Gaps = 3/96 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +  +G   R +T +   +     + P+ + +A+    D  I+        + R   
Sbjct: 331 QLWAISPNGGEPRQVTHTEHGVQSAFNWHPDGRSLAFV--CDNSIMLCDAKSGELVRMTA 388

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           R  N  S   A  FS +GK      + D    ++ V
Sbjct: 389 RTDNAPSAD-AVVFSPDGKHIAYMREIDGFNQLFVV 423


>gi|291439735|ref|ZP_06579125.1| protease [Streptomyces ghanaensis ATCC 14672]
 gi|291342630|gb|EFE69586.1| protease [Streptomyces ghanaensis ATCC 14672]
          Length = 1068

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 91/254 (35%), Gaps = 24/254 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +   DG    +   + +  +  PR SP+   VA+++  D     V++         +
Sbjct: 30  DVWLAPLDGGRA-WRVSADNVPVTHPRISPDGTTVAWSSTRDG-APEVHVAPVD-GGPAE 86

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTNTLFINI-- 305
           R+  + ++    R ++ +G+   +S             +V L       L      ++  
Sbjct: 87  RLTYWGNLKTQVRGWTPDGRVLALSAHGQPSLRRTWARAVPLDGGPATTLPYGPVGDVVL 146

Query: 306 SASY----SPDSSQIVFE-SDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                   +P   +  +    R G   +L++ +    +  R+ +D + +   P+W+  G 
Sbjct: 147 GPHTVLLSAPMGREAAWWKRYRGGTAGKLWIDREGDGEFVRLHEDLDGNIEYPLWA--GT 204

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAF        A+     DGS  R         A   +  G  +++S         +L+
Sbjct: 205 RIAFLSDHEGTGALYSSLADGSDLRRHTPLGGFYARHAATDGTRVVYSA------AGELW 258

Query: 420 SI-DLNGRNETLIN 432
            + DL+G     ++
Sbjct: 259 ILDDLDGAEPRRLD 272



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 65/190 (34%), Gaps = 20/190 (10%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+    + + D    ++   L      R++           SPD + + + S R+G  ++
Sbjct: 20  GELVAFTAEDD----VWLAPLDGGRAWRVSADNVPVTHPRISPDGTTVAWSSTRDGAPEV 75

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL 385
           +V   +G   +R++           W+P G ++A +              +  DG     
Sbjct: 76  HVAPVDGGPAERLTYWGNLKTQVRGWTPDGRVLALSAHGQPSLRRTWARAVPLDGGPATT 135

Query: 386 LVEDSNLQAP--------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI---NTP 434
           L                 + +P GR   + ++  G T  KL+ ID  G  E +    +  
Sbjct: 136 LPYGPVGDVVLGPHTVLLS-APMGREAAWWKRYRGGTAGKLW-IDREGDGEFVRLHEDLD 193

Query: 435 AYASDPQWVG 444
                P W G
Sbjct: 194 GNIEYPLWAG 203



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 95/306 (31%), Gaps = 25/306 (8%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTP--SRDQI 213
           +++D          G F +R      + V       L ++D  DGA  R L       + 
Sbjct: 221 SLADGSDLRRHTPLGGFYARHAATDGTRVVYSAAGELWILDDLDGAEPRRLDVRLGGQRA 280

Query: 214 LFEP------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPR-F 265
             +P      R+S +      A      +       T      + +     +    PR F
Sbjct: 281 DLQPFPVNAARWSGSASPDHTARGSAVCVRGTVHWVTHRSGPARALAATPGVRARRPRTF 340

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSN-----ATERLTNTL-FINISASYSPDSSQIVFE 319
            +NG+  ++ V   E  D       +         R+        +  + +PD S+    
Sbjct: 341 RANGEEWVVWVTDAEGDDALEFAPATGLAPGATPRRIAAGRLGRVLELAMAPDGSRAAIA 400

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKK 378
           S      ++ +++    + + + + ++       +SP    +A++         + +   
Sbjct: 401 SH---DGRVLLVERETGEVREVDRSEDGDVSGLAFSPDSAWLAWSHPGPRPLSQLRLANT 457

Query: 379 -DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLINTP 434
            D S            AP ++  G+ L F   +  D     +  DL    G    LI   
Sbjct: 458 TDLSVTEATPLRFQDYAPAFTLDGKHLAFLSTRSFDPVYDEHVFDLAFVEGVRPYLITLA 517

Query: 435 AYASDP 440
           A    P
Sbjct: 518 ATTPSP 523


>gi|304398058|ref|ZP_07379933.1| WD40 domain protein beta Propeller [Pantoea sp. aB]
 gi|304354344|gb|EFM18716.1| WD40 domain protein beta Propeller [Pantoea sp. aB]
          Length = 422

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 15/144 (10%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISAS-Y---SPDSSQIVF-ESDREGKEQLYVMQS 333
           + +              RLT++  + +    +   +PD SQI F  +D     QL+++  
Sbjct: 269 EGSSQQLPAPPAGVQQRRLTHSRGVALQPRHWLRAAPDGSQIAFLMADAGEVIQLWMVSP 328

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           NG + ++I+    +      W P+G  IAF   +    ++     +    + L      +
Sbjct: 329 NGGEPRQITHLSHSIQSAFSWHPEGQAIAFICDN----SVMRCDIESGACQRLT-GRTEE 383

Query: 394 APT-----WSPSGRSLIFSRKKDG 412
           AP+     WSP G  + + R+ +G
Sbjct: 384 APSGDAVVWSPDGTQIAYMREVNG 407



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 53/145 (36%), Gaps = 12/145 (8%)

Query: 247 DRAPKRIGNFRSMILAPR-F---SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTN-T 300
               +R+ + R + L PR +   + +G +         E + ++ V        ++T+ +
Sbjct: 281 GVQQRRLTHSRGVALQPRHWLRAAPDGSQIAFLMADAGEVIQLWMVSPNGGEPRQITHLS 340

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQG 358
             I  + S+ P+   I F  D      +          +R++   E +       WSP G
Sbjct: 341 HSIQSAFSWHPEGQAIAFICDNS----VMRCDIESGACQRLTGRTEEAPSGDAVVWSPDG 396

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQE 383
             IA+ +       +  +    +QE
Sbjct: 397 TQIAYMREVNGWRQLFTVAAATAQE 421



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 76/213 (35%), Gaps = 18/213 (8%)

Query: 139 IIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDF-----NSRILFVSESVVSGIIKNS 192
           +  + +     SW R     I D +          F     ++   +           + 
Sbjct: 214 VGERGYQKPDGSWQRWAIAFIGDTVTAQGEKRPEVFIVDLPDALEDYARAGEKPLEGSSQ 273

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                  G   R LT SR  +  +PR     +P+  ++A+   D  ++++++++      
Sbjct: 274 QLPAPPAGVQQRRLTHSR-GVALQPRHWLRAAPDGSQIAFLMADAGEVIQLWMVSPNGGE 332

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINIS 306
             +      S+  A  +   G+             +   D++S A +RLT       +  
Sbjct: 333 PRQITHLSHSIQSAFSWHPEGQAIAFICDNS----VMRCDIESGACQRLTGRTEEAPSGD 388

Query: 307 A-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           A  +SPD +QI +  +  G  QL+ + +  + +
Sbjct: 389 AVVWSPDGTQIAYMREVNGWRQLFTVAAATAQE 421


>gi|284097405|ref|ZP_06385518.1| peptidase C14, caspase catalytic subunit p20 [Candidatus
           Poribacteria sp. WGA-A3]
 gi|283831084|gb|EFC35081.1| peptidase C14, caspase catalytic subunit p20 [Candidatus
           Poribacteria sp. WGA-A3]
          Length = 665

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 54/341 (15%), Positives = 114/341 (33%), Gaps = 50/341 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS-------PASWRKIAHTISDDIYQSITGE 169
                       RLWDV   +       ++              +A   +DD        
Sbjct: 67  RTLASSGYDKTVRLWDVATGRHTSTLTGYTKWINSIAFSPDGSILAGGGTDDTVHLWDPV 126

Query: 170 KGDFNSRILFVSESV------------VSGIIKNSLCVMDRDGA------NIRYLTPSRD 211
            G+  + +   +++V             SG   N++ + D          N         
Sbjct: 127 SGEHKATLTGHTQTVNTVAFSPDGKTLASGAWDNTVRLWDVATRTQKAVLNEHTFFGENM 186

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +    FS +   +A   ++++    V L D       + +      I +  FS +G+ 
Sbjct: 187 SGISHVAFSADGHTLASVAFNED---TVRLSDPETGAEKRILDT--GRISSLTFSPDGRT 241

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYV 330
             +S   D  + ++  D+ S   + + +    +I A ++SPD   +V      G  QL +
Sbjct: 242 LAMSNGMDRTIQLW--DVASGERKTVLSGNSWSIGAIAFSPDGKTLV----SGGGWQLLL 295

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVE 388
                  Q         + +   ++P G  +A    +G +  + +      Q +  L+  
Sbjct: 296 WDPRTGAQTGEIAGHIPNGWRIAFTPDGKTLA---STGTRHTVHLWDVSNGQHKAALIGA 352

Query: 389 DSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            ++    +  +SP GR+L       G +G  ++  D+  R+
Sbjct: 353 RADDWISSINFSPDGRTLA------GGSGWHIWLWDVENRH 387



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 96/297 (32%), Gaps = 31/297 (10%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQS---------ITGEKGDFNSRILFVSESVVSGIIK 190
           +G+  +S   S   +A+ +   IY +             +G  +        ++ S    
Sbjct: 16  VGEIRYSPDGSLLAVANAVGIWIYDARSFVELDLLTGHREGIRSIAFSPDGRTLASSGYD 75

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            ++ + D              + +    FSP+   +A           V+L D       
Sbjct: 76  KTVRLWDVATGRHTSTLTGYTKWINSIAFSPDGSILA----GGGTDDTVHLWDPVSGEHK 131

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISA 307
             +      +    FS +GK    S   D  + ++  D+ +   + + N       N+S 
Sbjct: 132 ATLTGHTQTVNTVAFSPDGKTLA-SGAWDNTVRLW--DVATRTQKAVLNEHTFFGENMSG 188

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               ++S D   +   +  E  + + +       +KRI      S     +SP G  +A 
Sbjct: 189 ISHVAFSADGHTLASVAFNE--DTVRLSDPETGAEKRILDTGRISSL--TFSPDGRTLAM 244

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +        +  +     +  L     ++ A  +SP G++L+      G     L+ 
Sbjct: 245 SNGMDRTIQLWDVASGERKTVLSGNSWSIGAIAFSPDGKTLV----SGGGWQLLLWD 297



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 90/299 (30%), Gaps = 39/299 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +     R  V   LWDV + +                I     D I        G  
Sbjct: 323 GKTLASTGTRHTVH--LWDVSNGQHKAAL-----------IGARADDWISSINFSPDG-- 367

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS------RDQILFEPRFSPNQQKVA 227
                      ++G     + + D +  ++  +             +    FSP+ + +A
Sbjct: 368 ---------RTLAGGSGWHIWLWDVENRHLEAVVKGYTGSSVSGGGIRAVAFSPDGRFLA 418

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             +   +  ++V+            +   +  I +  F+ + +    S   D  + ++ +
Sbjct: 419 SGSGHRDMKIQVWY---GGRTHKATLTGHKDAITSIAFNPDSRTLA-SGSADHTVRLWDI 474

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +       LT       + ++SP+   +   S       + +  +     K        
Sbjct: 475 -ISERHINTLTGHTDWVNTVAFSPEGRTLASGSR---DTTICLWDAVTGAHKATLMGHIH 530

Query: 348 SYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           S     +SP G  +A    +      +  +     +  L     ++ +  +SP GR+L 
Sbjct: 531 SVESVAFSPDGRTLASGSGYDDRTVRLWDVDTGRHKMTLTGHTDSVVSVAFSPDGRTLA 589



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 84/242 (34%), Gaps = 15/242 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            SG     + V    G   +         +    F+P+ + +A  + D      V L D 
Sbjct: 420 GSGHRDMKIQVW-YGGRTHKATLTGHKDAITSIAFNPDSRTLASGSADH----TVRLWDI 474

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFI 303
             +R    +      +    FS  G+    S  +D  + ++  D  + A +  L   +  
Sbjct: 475 ISERHINTLTGHTDWVNTVAFSPEGRTLA-SGSRDTTICLW--DAVTGAHKATLMGHIHS 531

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SPD   +   S  + +  + +   +    K        S     +SP G  +A 
Sbjct: 532 VESVAFSPDGRTLASGSGYDDRT-VRLWDVDTGRHKMTLTGHTDSVVSVAFSPDGRTLAT 590

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             + G    +  +  + +  R + ED N        +   L+F     G++G +   ++ 
Sbjct: 591 GSWDGTVL-LWDITPETA-ARHIAEDVNRDGIV---NHHDLVFVASYFGESGVREADVNG 645

Query: 424 NG 425
           +G
Sbjct: 646 DG 647



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 50/153 (32%), Gaps = 13/153 (8%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSS 314
            +  +   R+S +G    ++     A+ I+  D +S    + LT       S ++SPD  
Sbjct: 12  GKGGVGEIRYSPDGSLLAVA----NAVGIWIYDARSFVELDLLTGHREGIRSIAFSPDGR 67

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +         + + +                       +SP G ++A     G    + 
Sbjct: 68  TLA---SSGYDKTVRLWDVATGRHTSTLTGYTKWINSIAFSPDGSILA---GGGTDDTVH 121

Query: 375 VMKKDGSQER--LLVEDSNLQAPTWSPSGRSLI 405
           +      + +  L      +    +SP G++L 
Sbjct: 122 LWDPVSGEHKATLTGHTQTVNTVAFSPDGKTLA 154



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 31/213 (14%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWD+   + I                HT  D +       +G           ++ SG 
Sbjct: 470 RLWDIISERHINTLT-----------GHT--DWVNTVAFSPEG----------RTLASGS 506

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              ++C+ D      +         +    FSP+ + +A  +    D   V L D    R
Sbjct: 507 RDTTICLWDAVTGAHKATLMGHIHSVESVAFSPDGRTLA--SGSGYDDRTVRLWDVDTGR 564

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
               +      +++  FS +G+    +   D  + ++ +  ++ A       +  +++  
Sbjct: 565 HKMTLTGHTDSVVSVAFSPDGRTLA-TGSWDGTVLLWDITPETAA-----RHIAEDVNRD 618

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
              +   +VF +   G+  +     NG     I
Sbjct: 619 GIVNHHDLVFVASYFGESGVREADVNGDGVVNI 651


>gi|307150171|ref|YP_003885555.1| Sigma 54 interacting domain-containing protein [Cyanothece sp. PCC
            7822]
 gi|306980399|gb|ADN12280.1| Sigma 54 interacting domain protein [Cyanothece sp. PCC 7822]
          Length = 1290

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 64/381 (16%), Positives = 135/381 (35%), Gaps = 66/381 (17%)

Query: 88   KQKITNPDSIPRFQDWNSLGAQVL--------VTGRVIKEGKDRLRVE------FRLWDV 133
             + I +       + W+  G+ +         +   V       + V        RLWD 
Sbjct: 661  GEMIVSGSGDDTVRLWDKKGSPIADPFKVHESIVNSVAFSSDGEMIVSGSWDDTVRLWD- 719

Query: 134  KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
              +  +I + F    +    +A   S D                    E +VSG    ++
Sbjct: 720  -KQGNLIAEPFRGHESYVTSVA--FSSD-------------------GEMIVSGSWDKTV 757

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             + D+ G  I       +  +    FS + + +   ++D      V L D + +   +  
Sbjct: 758  RLWDKQGNLIAEPFRGHEDYVTSVAFSSDGEMIVSGSWDK----TVRLWDKQGNLIAEPF 813

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSP- 311
                + + +  FSS+G+  + S  +DE + ++  D Q N   E          S ++SP 
Sbjct: 814  IGHENWVTSVAFSSDGEMIV-SGSEDETVRLW--DKQGNPIAEPFRGHESYVTSVAFSPL 870

Query: 312  ---DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
               +   IV  S R+G  +L+     G+      +  +       +SP G++I       
Sbjct: 871  PQTEGGIIVSGS-RDGTVRLW--DKQGNPLAEPFRGHKRIVTSVAFSPDGEMIVTGSQDD 927

Query: 369  EKFAIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-- 424
                + +  K G+   E L   +  + +  +SP G  ++ + +   D   +L+    N  
Sbjct: 928  T---VRLWDKKGNPIAEPLRGHERGVTSVAFSPDGEMIVSASQ---DKTVRLWDKKGNPI 981

Query: 425  ----GRNETLINTPAYASDPQ 441
                  ++ ++ + A++ D +
Sbjct: 982  AEPFRGHKRIVTSVAFSPDGE 1002



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 86/224 (38%), Gaps = 16/224 (7%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            V+G   +++ + D+ G  I       ++ +    FSP+ + +  A+ D      V L D 
Sbjct: 921  VTGSQDDTVRLWDKKGNPIAEPLRGHERGVTSVAFSPDGEMIVSASQDK----TVRLWDK 976

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFI 303
            + +   +     + ++ +  FS +G+    S  KD+ + ++  D + N   E L      
Sbjct: 977  KGNPIAEPFRGHKRIVTSVAFSPDGEMIT-SGSKDKTVWLW--DKKGNPIGEPLRGHENG 1033

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              S ++S D   IV  S+    + + +    G+      +  E       +S  G++I  
Sbjct: 1034 VTSVAFSRDGEMIVSGSE---DKTVRLWDKKGNPIGEPLRGHENPVTSVAFSRDGEMIVS 1090

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
                     + +  K G+          + + +  +SP G  ++
Sbjct: 1091 GSEDKT---VRLWDKQGNPIAAPFRGHENRVNSVAFSPDGEIIV 1131



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/302 (16%), Positives = 106/302 (35%), Gaps = 47/302 (15%)

Query: 109  QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            +++V+G   K          RLWD   +  +I + F                        
Sbjct: 788  EMIVSGSWDKT--------VRLWD--KQGNLIAEPFIGHEN------------------- 818

Query: 169  EKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                + + + F S+   +VSG    ++ + D+ G  I       +  +    FSP  Q  
Sbjct: 819  ----WVTSVAFSSDGEMIVSGSEDETVRLWDKQGNPIAEPFRGHESYVTSVAFSPLPQTE 874

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                        V L D + +   +     + ++ +  FS +G+  + +  +D+ + ++ 
Sbjct: 875  GGIIVSGSRDGTVRLWDKQGNPLAEPFRGHKRIVTSVAFSPDGEMIV-TGSQDDTVRLW- 932

Query: 287  VDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             D + N   E L        S ++SPD   IV  S     + + +    G+      +  
Sbjct: 933  -DKKGNPIAEPLRGHERGVTSVAFSPDGEMIVSASQ---DKTVRLWDKKGNPIAEPFRGH 988

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRS 403
            +       +SP G++I           + +  K G+   E L   ++ + +  +S  G  
Sbjct: 989  KRIVTSVAFSPDGEMITSGSKDKT---VWLWDKKGNPIGEPLRGHENGVTSVAFSRDGEM 1045

Query: 404  LI 405
            ++
Sbjct: 1046 IV 1047



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 89/246 (36%), Gaps = 16/246 (6%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
                 E+G  +       E +VSG   N++ + D+ G  I       +  +    FS +
Sbjct: 559 IPFCGHERGVTSVAFSRDGEMIVSGSWDNTVRLWDKKGNPIAEPLRGHESTVESVAFSRD 618

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +   ++D+     V L D + +   + +    S + +  FS +G+  + S   D+ +
Sbjct: 619 GEMIVSGSWDN----TVRLWDKKGNPIAEPLRGHESTVESVAFSPDGEMIV-SGSGDDTV 673

Query: 283 DIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++  D + +   +       I  S ++S D   IV  S     + + +    G+     
Sbjct: 674 RLW--DKKGSPIADPFKVHESIVNSVAFSSDGEMIVSGS---WDDTVRLWDKQGNLIAEP 728

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSP 399
            +  E+      +S  G++I    +      + +  K G+              +  +S 
Sbjct: 729 FRGHESYVTSVAFSSDGEMIVSGSWDKT---VRLWDKQGNLIAEPFRGHEDYVTSVAFSS 785

Query: 400 SGRSLI 405
            G  ++
Sbjct: 786 DGEMIV 791



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 108/274 (39%), Gaps = 19/274 (6%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D + I+   + ++   W K  + I++ +    +  +    SR     E +VSG   N++ 
Sbjct: 576 DGEMIVSGSWDNTVRLWDKKGNPIAEPLRGHESTVESVAFSRD---GEMIVSGSWDNTVR 632

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D+ G  I       +  +    FSP+ + +   + D  D +R++         P ++ 
Sbjct: 633 LWDKKGNPIAEPLRGHESTVESVAFSPDGEMIVSGSGD--DTVRLWDKKGSPIADPFKV- 689

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDS 313
              S++ +  FSS+G+  + S   D+ + ++  D Q N   E          S ++S D 
Sbjct: 690 -HESIVNSVAFSSDGEMIV-SGSWDDTVRLW--DKQGNLIAEPFRGHESYVTSVAFSSDG 745

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             IV  S     + + +    G+      +  E       +S  G++I    +      +
Sbjct: 746 EMIVSGS---WDKTVRLWDKQGNLIAEPFRGHEDYVTSVAFSSDGEMIVSGSWDKT---V 799

Query: 374 GVMKKDGS--QERLLVEDSNLQAPTWSPSGRSLI 405
            +  K G+   E  +  ++ + +  +S  G  ++
Sbjct: 800 RLWDKQGNLIAEPFIGHENWVTSVAFSSDGEMIV 833



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 103/286 (36%), Gaps = 27/286 (9%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISD--DIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           D + I+      +   W K    I+D   +++SI       +   + V     SG   ++
Sbjct: 660 DGEMIVSGSGDDTVRLWDKKGSPIADPFKVHESIVNSVAFSSDGEMIV-----SGSWDDT 714

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D+ G  I       +  +    FS + + +   ++D      V L D + +   + 
Sbjct: 715 VRLWDKQGNLIAEPFRGHESYVTSVAFSSDGEMIVSGSWDK----TVRLWDKQGNLIAEP 770

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSP 311
                  + +  FSS+G+  + S   D+ + ++  D Q N   E          S ++S 
Sbjct: 771 FRGHEDYVTSVAFSSDGEMIV-SGSWDKTVRLW--DKQGNLIAEPFIGHENWVTSVAFSS 827

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP----QGDLIAFTKFS 367
           D   IV  S+    E + +    G+      +  E+      +SP    +G +I      
Sbjct: 828 DGEMIVSGSE---DETVRLWDKQGNPIAEPFRGHESYVTSVAFSPLPQTEGGIIVSGSRD 884

Query: 368 GEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKD 411
           G    + +  K G+            + +  +SP G  ++   + D
Sbjct: 885 GT---VRLWDKQGNPLAEPFRGHKRIVTSVAFSPDGEMIVTGSQDD 927



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 90/229 (39%), Gaps = 14/229 (6%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            D + I+      +   W K  + I++ +      E+G  +       E +VS     ++ 
Sbjct: 916  DGEMIVTGSQDDTVRLWDKKGNPIAEPLR---GHERGVTSVAFSPDGEMIVSASQDKTVR 972

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + D+ G  I        +I+    FSP+ + +   + D      V+L D + +   + + 
Sbjct: 973  LWDKKGNPIAEPFRGHKRIVTSVAFSPDGEMITSGSKDK----TVWLWDKKGNPIGEPLR 1028

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDS 313
               + + +  FS +G+  + S  +D+ + ++  D + N   E L        S ++S D 
Sbjct: 1029 GHENGVTSVAFSRDGEMIV-SGSEDKTVRLW--DKKGNPIGEPLRGHENPVTSVAFSRDG 1085

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              IV  S+    + + +    G+      +  E       +SP G++I 
Sbjct: 1086 EMIVSGSE---DKTVRLWDKQGNPIAAPFRGHENRVNSVAFSPDGEIIV 1131



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 55/137 (40%), Gaps = 8/137 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D+ G  I       +  +    FS + + +   + D      V L D +
Sbjct: 1006 SGSKDKTVWLWDKKGNPIGEPLRGHENGVTSVAFSRDGEMIVSGSEDK----TVRLWDKK 1061

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +   + +    + + +  FS +G+  + S  +D+ + ++  D Q N            +
Sbjct: 1062 GNPIGEPLRGHENPVTSVAFSRDGEMIV-SGSEDKTVRLW--DKQGNPIAAPFRGHENRV 1118

Query: 306  -SASYSPDSSQIVFESD 321
             S ++SPD   IV  SD
Sbjct: 1119 NSVAFSPDGEIIVSGSD 1135



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 39/102 (38%), Gaps = 5/102 (4%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VSG    ++ + D+ G  I       +  +    FS + + +   + D      V L D 
Sbjct: 1047 VSGSEDKTVRLWDKKGNPIGEPLRGHENPVTSVAFSRDGEMIVSGSEDK----TVRLWDK 1102

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            + +          + + +  FS +G   ++S   D+ + ++ 
Sbjct: 1103 QGNPIAAPFRGHENRVNSVAFSPDG-EIIVSGSDDKTVRLWR 1143


>gi|291568164|dbj|BAI90436.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 1179

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 88/240 (36%), Gaps = 20/240 (8%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +KG     +    E V +G    S+ + + +G  ++ +  +    + +  FSPN + +A
Sbjct: 907  HDKGVIGLGVSPDGEIVATGSWDESIRLWNMEGELLKVINNAHSMGVNQLAFSPNGEVIA 966

Query: 228  YATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                D +  +        R     + I           FS +GK  +      E  ++  
Sbjct: 967  SVGNDKKVKLWSRVGEFIREWEYSEVITGV-------AFSPDGKMVV---TGSEDKEVRV 1016

Query: 287  VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            V +  + T  + N        ++SP    I   S  +   +L+ +      +K I    +
Sbjct: 1017 VYIDGSGTRLIGNHQGSVWGVAFSPQGDIIASAST-DNTVRLWFLD----GRKSIVLHHQ 1071

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
                   +SP G++IA   + G    I +   +G + + L+      +   +S  G+ +I
Sbjct: 1072 GIVDHVAFSPDGEMIASASWDGT---IQLWTNEGVKLKTLIRHQGPARTVAFSNDGKWII 1128



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 52/367 (14%), Positives = 121/367 (32%), Gaps = 97/367 (26%)

Query: 162  IYQSITGEKGDFNSRILFVSES-----VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            I +      G  ++ I  V+ S     + SG    ++ +   DG +++        +   
Sbjct: 773  INERSAIVLGKHDNSIRTVAFSPDGNIIASGSWDQTIRLWSPDGRHLQTFVSHTAPLTQL 832

Query: 217  PRFSPNQQKVAYATYD-------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF---- 265
              FSP+ + +A A ++        +      L           +      + +  +    
Sbjct: 833  -AFSPDGETLASADFNGEVKLWKVKSPFLTVLSGHETHLRRVALTPDHQQVFSVSWGGEV 891

Query: 266  -------------------------SSNGKRALISVQKDEAMDIYSV---------DLQS 291
                                     S +G   + +   DE++ ++++         +  S
Sbjct: 892  YRWDMQGRLLGRLEGHDKGVIGLGVSPDG-EIVATGSWDESIRLWNMEGELLKVINNAHS 950

Query: 292  NATERLTNTL--------FIN----------------------ISASYSPDSSQIVFESD 321
                +L  +           +                         ++SPD   +V  S+
Sbjct: 951  MGVNQLAFSPNGEVIASVGNDKKVKLWSRVGEFIREWEYSEVITGVAFSPDGKMVVTGSE 1010

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                +++ V+  +GS   R+  + + S +   +SPQGD+IA          + +   DG 
Sbjct: 1011 ---DKEVRVVYIDGSG-TRLIGNHQGSVWGVAFSPQGDIIASASTDNT---VRLWFLDGR 1063

Query: 382  QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS---IDLNG--RNETLINTPAY 436
            +  +L     +    +SP G  +  +     D   +L++   + L    R++    T A+
Sbjct: 1064 KSIVLHHQGIVDHVAFSPDGEMIASASW---DGTIQLWTNEGVKLKTLIRHQGPARTVAF 1120

Query: 437  ASDPQWV 443
            ++D +W+
Sbjct: 1121 SNDGKWI 1127



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 100/338 (29%), Gaps = 63/338 (18%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            D  ++       +   W      ++D  +     E   F+    ++     +  +K  L 
Sbjct: 714  DGNRLASVSDDGTVKLWDITGELLADFEHSQEPVEALAFSPDGQYLVAGGHNRELK--LW 771

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
             ++        +    D  +    FSP+   +A  ++D    +R++  D    R  +   
Sbjct: 772  SIN---ERSAIVLGKHDNSIRTVAFSPDGNIIASGSWD--QTIRLWSPD---GRHLQTFV 823

Query: 255  NFRSMILAPRFSSNGKRAL----------------------------------------I 274
            +  + +    FS +G+                                            
Sbjct: 824  SHTAPLTQLAFSPDGETLASADFNGEVKLWKVKSPFLTVLSGHETHLRRVALTPDHQQVF 883

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            SV     +  +  D+Q     RL       I    SPD   +   S     E + +    
Sbjct: 884  SVSWGGEVYRW--DMQGRLLGRLEGHDKGVIGLGVSPDGEIVATGS---WDESIRLWNME 938

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            G   K I+           +SP G++IA     G    + +  + G   R       +  
Sbjct: 939  GELLKVINNAHSMGVNQLAFSPNGEVIASV---GNDKKVKLWSRVGEFIREWEYSEVITG 995

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              +SP G+ ++      G    ++  + ++G    LI 
Sbjct: 996  VAFSPDGKMVV-----TGSEDKEVRVVYIDGSGTRLIG 1028



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 107/268 (39%), Gaps = 23/268 (8%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D ++     E+  ++  I+   +++ +   + S+ +  RDG  +        Q++ +  F
Sbjct: 654 DLVFTFSAHEEEIWDL-IIRDQDTIATSSNRGSIKLWRRDGT-LLNEFVGHTQLVKKIAF 711

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  ++A  + D      V L D           + +  + A  FS +G+  + +   +
Sbjct: 712 SPDGNRLASVSDDG----TVKLWDI-TGELLADFEHSQEPVEALAFSPDGQYLV-AGGHN 765

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             + ++S++    +   L        + ++SPD + I   S     + + +   +G   +
Sbjct: 766 RELKLWSIN--ERSAIVLGKHDNSIRTVAFSPDGNIIASGS---WDQTIRLWSPDGRHLQ 820

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWS 398
                  A      +SP G+ +A   F+G    + + K       +L   +++L+    +
Sbjct: 821 TFVSHT-APLTQLAFSPDGETLASADFNG---EVKLWKVKSPFLTVLSGHETHLRRVALT 876

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           P  + + FS       G ++Y  D+ GR
Sbjct: 877 PDHQQV-FSVS----WGGEVYRWDMQGR 899



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 96/272 (35%), Gaps = 43/272 (15%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           NS+ +    G N  +    ++  ++   +S + +++A  T  +   +         D   
Sbjct: 547 NSVLIQSVYGMNEYHSFGRQEDRVWSLDWSKDGEQIAIITRTNSQDVDR-RDKIITDNNQ 605

Query: 251 KRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             I N R   + + P F+   +            D Y     SN   R+ +    ++  +
Sbjct: 606 ILIFNRRGKLLNIIPNFAYELRTLAF------FPDGYIATGHSNGEIRIWSNQG-DLVFT 658

Query: 309 YSP-----------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +S            D   I   S+R     + + + +G+                 +SP 
Sbjct: 659 FSAHEEEIWDLIIRDQDTIATSSNRG---SIKLWRRDGTLLNEFV-GHTQLVKKIAFSPD 714

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGD 413
           G+ +A     G    + +    G    LL +  + Q P     +SP G+ L+       +
Sbjct: 715 GNRLASVSDDGT---VKLWDITGE---LLADFEHSQEPVEALAFSPDGQYLV---AGGHN 765

Query: 414 TGSKLYSID-----LNGRNETLINTPAYASDP 440
              KL+SI+     + G+++  I T A++ D 
Sbjct: 766 RELKLWSINERSAIVLGKHDNSIRTVAFSPDG 797


>gi|253686441|ref|YP_003015631.1| hypothetical protein PC1_0032 [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753019|gb|ACT11095.1| conserved hypothetical protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 434

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 53/147 (36%), Gaps = 18/147 (12%)

Query: 280 EAMDIYSVDLQSNATERLT-----NTLFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT         +      +   SPD S+I F   D  G  QL+
Sbjct: 282 GTATSMPAPPAGVQQRRLTFTHSRRYPGLVNQPRHWLRASPDGSEIAFLMRDEAGVVQLW 341

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +  NG + ++++  +        W P G  +AF   +    +I + +    +   L   
Sbjct: 342 TISPNGGEPRQVTHTEHGVQSAFNWHPDGRSLAFVCDN----SIMLCEAKSGELVRLTAR 397

Query: 390 SN----LQAPTWSPSGRSLIFSRKKDG 412
           ++      A  +SP G+ + + R+ DG
Sbjct: 398 TDSAPSADAVVFSPDGKHIAYMREIDG 424



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 57/159 (35%), Gaps = 15/159 (9%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-F---SSNGKRALISVQKD-E 280
           +A                       +R   +  ++  PR +   S +G      ++ +  
Sbjct: 280 LAGTATSMPAPPAGVQQRRLTFTHSRR---YPGLVNQPRHWLRASPDGSEIAFLMRDEAG 336

Query: 281 AMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + ++++        ++T+T   +  + ++ PD   + F  D      + + ++   +  
Sbjct: 337 VVQLWTISPNGGEPRQVTHTEHGVQSAFNWHPDGRSLAFVCDNS----IMLCEAKSGELV 392

Query: 340 RIS--QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           R++   D   S    V+SP G  IA+ +       + V+
Sbjct: 393 RLTARTDSAPSADAVVFSPDGKHIAYMREIDGFNQLFVV 431



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 49/126 (38%), Gaps = 11/126 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +Q     R SP+  ++A+   D+  +++++ +        +       +  A  +  +G+
Sbjct: 312 NQPRHWLRASPDGSEIAFLMRDEAGVVQLWTISPNGGEPRQVTHTEHGVQSAFNWHPDGR 371

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-----YSPDSSQIVFESDREGK 325
                        I   + +S    RLT     + + S     +SPD   I +  + +G 
Sbjct: 372 SLAFVCDNS----IMLCEAKSGELVRLTART--DSAPSADAVVFSPDGKHIAYMREIDGF 425

Query: 326 EQLYVM 331
            QL+V+
Sbjct: 426 NQLFVV 431


>gi|186687001|ref|YP_001870390.1| WD-40 repeat-containing protein [Nostoc punctiforme PCC 73102]
 gi|186469625|gb|ACC85422.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1182

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/310 (16%), Positives = 107/310 (34%), Gaps = 23/310 (7%)

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q+I +     PA        +  ++   +   K DF +          +     +L  +
Sbjct: 489 QQLILRLQKEIPAQ----PGYVCGNLINLLRHLKVDFTNYDFSNLTIWQADFQGTNLNKV 544

Query: 197 DRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +  GANI+  +           +FSP+ + +   + D  D + ++ ++         +  
Sbjct: 545 NFTGANIKKSVFTEYLASSLCVKFSPDGKFL--VSTDANDGIHLWNIEGLAAIHLTTLQG 602

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            ++ +   +FS NGK    +   D  + I++++        L +    + S S+SPD   
Sbjct: 603 HQAWVWDAKFSPNGKVLA-TCSDDGVIKIWNIN-TGKCHHTLQDDSKRSWSISFSPDGKI 660

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +   S   G   + +   N     ++ +         ++S  G +IA      E   I +
Sbjct: 661 LASGS---GDHTVKLWDINTGQLLKVLKGHINIVRPVIFSSDGKIIA---SGSEDQTIKI 714

Query: 376 MKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              D  +    +E   + + + + S  G+ L        D   KL+ +      E     
Sbjct: 715 WDVDSGEYLQTLEGHLAQVWSVSLSEDGKILA---SGSADKTVKLWDVS---TGECRTTL 768

Query: 434 PAYASDPQWV 443
                D  W 
Sbjct: 769 QGNQIDGVWS 778



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 75/205 (36%), Gaps = 17/205 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +++ +FSPN + +A  + D      + + +    +    + +      +  
Sbjct: 598 TTLQGHQAWVWDAKFSPNGKVLATCSDDG----VIKIWNINTGKCHHTLQDDSKRSWSIS 653

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           FS +GK  L S   D  + ++  D+ +    ++       +    +S D   I   S+  
Sbjct: 654 FSPDGK-ILASGSGDHTVKLW--DINTGQLLKVLKGHINIVRPVIFSSDGKIIASGSE-- 708

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +   +  +  +  +   A  +    S  G ++A          + +      + 
Sbjct: 709 -DQTIKIWDVDSGEYLQTLEGHLAQVWSVSLSEDGKILASGSADKT---VKLWDVSTGEC 764

Query: 384 RLLVEDSN---LQAPTWSPSGRSLI 405
           R  ++ +    + + ++SPSG S++
Sbjct: 765 RTTLQGNQIDGVWSVSFSPSGESVV 789



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 76/214 (35%), Gaps = 20/214 (9%)

Query: 211  DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            +  +     SP    +A A  D        + D +     K +      + +  +S NG+
Sbjct: 939  NGWILSLAMSPQGNALATANTDT----MAKIWDIKTGECIKTLEGHTGWVFSVAWSPNGQ 994

Query: 271  RALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
                S  +   +     D+++    + L        S  +SPD   ++  S       L 
Sbjct: 995  FLATSSDRCIKLW----DVKTWQCIKTLEAHSGWVYSLDWSPDGQTLLSGSF---DLSLK 1047

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVE 388
            +   N  + ++             + PQG++IA T   G    I +   +  +  R L+ 
Sbjct: 1048 LWDINTGNCQQTLHGHTKIVLGAKFHPQGNIIASTGQDGT---IKLWNSNTGECLRTLIG 1104

Query: 389  DSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             ++   A  + P+G++L    +   D   KL+ +
Sbjct: 1105 HADWIWAIAFHPNGQTLASGSQ---DETIKLWDV 1135



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 53/391 (13%), Positives = 111/391 (28%), Gaps = 76/391 (19%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY---------- 163
            G+++  G     V  +LWD+   + +  K         R +  +    I           
Sbjct: 658  GKILASGSGDHTV--KLWDINTGQLL--KVLKGHINIVRPVIFSSDGKIIASGSEDQTIK 713

Query: 164  -------QSITGEKG----DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
                   + +   +G     ++  +    + + SG    ++ + D      R        
Sbjct: 714  IWDVDSGEYLQTLEGHLAQVWSVSLSEDGKILASGSADKTVKLWDVSTGECRTTLQGNQI 773

Query: 213  ILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
                   FSP+ + V  A     ++  + L D +     +        + +  FS NGK 
Sbjct: 774  DGVWSVSFSPSGESVVVA----GEVPVISLWDIKTGECIQTFLGHIGRVWSVAFSPNGKT 829

Query: 272  ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-------------- 317
               S  +D+++ ++ V       + L          + + +   +               
Sbjct: 830  LA-SASEDQSVKLWDV-TTGRCLKTLQGYSSRVWCVAVNANGQLLAANTNKTLRIWDIST 887

Query: 318  ------------------FESDR------EGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                              F S             + +  +      R +           
Sbjct: 888  AKCIHTLHGHTREICGTVFSSHETILASAGADGTIRLWDTITGKCLR-TLQVNGWILSLA 946

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             SPQG+ +A T  +     I  +K     + L      + +  WSP+G+ L  S  +   
Sbjct: 947  MSPQGNALA-TANTDTMAKIWDIKTGECIKTLEGHTGWVFSVAWSPNGQFLATSSDR--- 1002

Query: 414  TGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               KL+ +      +TL     +     W  
Sbjct: 1003 -CIKLWDVKTWQCIKTLEAHSGWVYSLDWSP 1032



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 67/189 (35%), Gaps = 15/189 (7%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + D                +F   +SPN Q +A ++        + L D +  +  K + 
Sbjct: 965  IWDIKTGECIKTLEGHTGWVFSVAWSPNGQFLATSSDR-----CIKLWDVKTWQCIKTLE 1019

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDS 313
                 + +  +S +G+  L S   D ++ ++  D+ +   ++ L     I + A + P  
Sbjct: 1020 AHSGWVYSLDWSPDGQTLL-SGSFDLSLKLW--DINTGNCQQTLHGHTKIVLGAKFHPQG 1076

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            + I   + ++G   + +  SN  +  R         +   + P G  +A          I
Sbjct: 1077 NIIA-STGQDGT--IKLWNSNTGECLRTLIGHADWIWAIAFHPNGQTLASGSQDET---I 1130

Query: 374  GVMKKDGSQ 382
             +   +  +
Sbjct: 1131 KLWDVETGE 1139


>gi|297194448|ref|ZP_06911846.1| protease [Streptomyces pristinaespiralis ATCC 25486]
 gi|197718743|gb|EDY62651.1| protease [Streptomyces pristinaespiralis ATCC 25486]
          Length = 1066

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 94/256 (36%), Gaps = 28/256 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + V   DG    +   + +  +  PR SP+  ++A+++Y D     V+L         +
Sbjct: 24  DVWVAPLDGGRA-WRVSADNMPVNHPRISPDGTRIAWSSYRDG-TPEVHLAPVD-GGPSE 80

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTNTLFINISA 307
           R+ ++ S   + R ++ +G+   ++            ++V L     + L       +  
Sbjct: 81  RLTHWGSHKTSVRGWTPDGRVLALTSSGQASLRRTWAHAVPLDGGPADVLPYGPVGGV-- 138

Query: 308 SYSP---------DSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +Y P               ++  R G   +L++      +  R+ +D + +   P+W   
Sbjct: 139 AYGPRTLLLSATMGREAAAWKRYRGGTAGKLWIEGETEGEFVRLHEDIDGNVEYPLWV-- 196

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G+ +AF        A+     DGS  R         A   +  G  + ++         +
Sbjct: 197 GERVAFLSDHEGVGALYSSLPDGSDLRRHTGLDGFYARHAATDGIRVAYA------CAGE 250

Query: 418 LYSID-LNGRNETLIN 432
           L+ +D L+G     ++
Sbjct: 251 LWLLDGLDGEQPRRLD 266



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 18/189 (9%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+    + + D    ++   L      R++           SPD ++I + S R+G  ++
Sbjct: 14  GELIAFTAEDD----VWVAPLDGGRAWRVSADNMPVNHPRISPDGTRIAWSSYRDGTPEV 69

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL 385
           ++   +G   +R++           W+P G ++A T              +  DG    +
Sbjct: 70  HLAPVDGGPSERLTHWGSHKTSVRGWTPDGRVLALTSSGQASLRRTWAHAVPLDGGPADV 129

Query: 386 LVEDSNLQAPTWSP--------SGR-SLIFSRKKDGDTGSKLYSIDLNGRNETL-INTPA 435
           L     +    + P         GR +  + R + G  G      +  G    L  +   
Sbjct: 130 LPYGP-VGGVAYGPRTLLLSATMGREAAAWKRYRGGTAGKLWIEGETEGEFVRLHEDIDG 188

Query: 436 YASDPQWVG 444
               P WVG
Sbjct: 189 NVEYPLWVG 197



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 80/224 (35%), Gaps = 29/224 (12%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A+   DD     V++      RA +   +   +   PR S +G R   S  +D   
Sbjct: 14  GELIAFTAEDD-----VWVAPLDGGRAWRVSADNMPVN-HPRISPDGTRIAWSSYRDGTP 67

Query: 283 DIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQ---LYVMQSNGSDQ 338
           +++   +    +ERLT+      S   ++PD   +   S  +   +    + +  +G   
Sbjct: 68  EVHLAPVDGGPSERLTHWGSHKTSVRGWTPDGRVLALTSSGQASLRRTWAHAVPLDGGPA 127

Query: 339 KRISQDKEASYFDPVWSPQGDLI---------AFTKFSGEKF-AIGVMKKDGSQERLLVE 388
             +            + P+  L+         A+ ++ G     + +  +   +   L E
Sbjct: 128 DVL---PYGPVGGVAYGPRTLLLSATMGREAAAWKRYRGGTAGKLWIEGETEGEFVRLHE 184

Query: 389 --DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             D N++ P W   G  + F    +G     LYS   +G +   
Sbjct: 185 DIDGNVEYPLWV--GERVAFLSDHEG--VGALYSSLPDGSDLRR 224



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 8/136 (5%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +PD S+    S      ++ +++    + + + + +       V+SP    +A++     
Sbjct: 385 APDGSRAAVASH---DGRVLLVERETGEVREVDRSEHGDADGLVFSPDSAWLAWSHPGPS 441

Query: 370 KFA-IGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---N 424
               I +    D S             P ++  G+ L F  ++  D     +  DL    
Sbjct: 442 PLRQIKLANTGDLSVSEATPLRFADFQPAFTLDGKHLAFLSERAFDPVYDAHVFDLAFVG 501

Query: 425 GRNETLINTPAYASDP 440
           G    LI   A    P
Sbjct: 502 GCRPHLITLAATTPSP 517



 Score = 43.5 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 41/123 (33%), Gaps = 11/123 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R L   R   +     +P+  + A A++D     RV L++       +   +        
Sbjct: 369 RRLAAGRLGRVLALAVAPDGSRAAVASHDG----RVLLVERETGEVREVDRSEHGDADGL 424

Query: 264 RFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            FS +      S      +    +    DL  +    L    F +   +++ D   + F 
Sbjct: 425 VFSPDSAWLAWSHPGPSPLRQIKLANTGDLSVSEATPL---RFADFQPAFTLDGKHLAFL 481

Query: 320 SDR 322
           S+R
Sbjct: 482 SER 484



 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 90/258 (34%), Gaps = 46/258 (17%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYA----- 229
           R+ F+S+    G + +SL     DG+++R          F  R +  +  +VAYA     
Sbjct: 199 RVAFLSDHEGVGALYSSL----PDGSDLR---RHTGLDGFYARHAATDGIRVAYACAGEL 251

Query: 230 ------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKD-- 279
                   +    L + L   R D  P+ I       L      +  G+ + + ++    
Sbjct: 252 WLLDGLDGEQPRRLDIRLGGQRTDLQPRPI--DAGHHLGAA-DPDHTGRGSAVEIRGGIH 308

Query: 280 ----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL----YVM 331
                     S+ ++     RL  T  +            +V+ +D EG + L       
Sbjct: 309 WVTHREGPARSLAVEPGVRARLPRTFGVEGE-------QYVVWVTDAEGDDALEFAPATG 361

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VED 389
            + G+  +R++  +         +P G   A     G    + +++++  + R +   E 
Sbjct: 362 TAAGATPRRLAAGRLGRVLALAVAPDGSRAAVASHDG---RVLLVERETGEVREVDRSEH 418

Query: 390 SNLQAPTWSPSGRSLIFS 407
            +     +SP    L +S
Sbjct: 419 GDADGLVFSPDSAWLAWS 436


>gi|308188759|ref|YP_003932890.1| hypothetical protein Pvag_3303 [Pantoea vagans C9-1]
 gi|308059269|gb|ADO11441.1| Uncharacterized protein yidR [Pantoea vagans C9-1]
          Length = 419

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 59/144 (40%), Gaps = 15/144 (10%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISAS-Y---SPDSSQIVF-ESDREGKEQLYVMQS 333
           + +              RLT++  + +    +   +PD SQI F  +D     QL+ +  
Sbjct: 269 EGSSQQLPAPPAGVQQRRLTHSRGVALQPRHWLRTAPDGSQIAFLMADAGAVIQLWTVSP 328

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           NG + ++I++   +      W P G  IAF   +    ++   + +    + L      +
Sbjct: 329 NGGEPRQITELSHSIQSAFSWHPDGQSIAFICDN----SVMRCEVESGTCQRLTR-RTEE 383

Query: 394 APT-----WSPSGRSLIFSRKKDG 412
           AP+     WSP G  + F R+ +G
Sbjct: 384 APSGDAVVWSPDGSQIAFMREVNG 407



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 53/140 (37%), Gaps = 12/140 (8%)

Query: 247 DRAPKRIGNFRSMILAPR-F---SSNGKRALISVQKDEA-MDIYSVDLQSNATERLTN-T 300
               +R+ + R + L PR +   + +G +    +    A + +++V        ++T  +
Sbjct: 281 GVQQRRLTHSRGVALQPRHWLRTAPDGSQIAFLMADAGAVIQLWTVSPNGGEPRQITELS 340

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQG 358
             I  + S+ PD   I F  D      +   +      +R+++  E +       WSP G
Sbjct: 341 HSIQSAFSWHPDGQSIAFICDNS----VMRCEVESGTCQRLTRRTEEAPSGDAVVWSPDG 396

Query: 359 DLIAFTKFSGEKFAIGVMKK 378
             IAF +       +  +  
Sbjct: 397 SQIAFMREVNGWRQLFTVAA 416



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 57/141 (40%), Gaps = 12/141 (8%)

Query: 200 GANIRYLTPSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           G   R LT SR  +  +PR     +P+  ++A+   D   +++++ +        +    
Sbjct: 281 GVQQRRLTHSR-GVALQPRHWLRTAPDGSQIAFLMADAGAVIQLWTVSPNGGEPRQITEL 339

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPD 312
             S+  A  +  +G+             +   +++S   +RLT       S     +SPD
Sbjct: 340 SHSIQSAFSWHPDGQSIAFICDNS----VMRCEVESGTCQRLTRRTEEAPSGDAVVWSPD 395

Query: 313 SSQIVFESDREGKEQLYVMQS 333
            SQI F  +  G  QL+ + +
Sbjct: 396 GSQIAFMREVNGWRQLFTVAA 416



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 53/149 (35%), Gaps = 8/149 (5%)

Query: 141 GKKFFSSPA--SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
            ++  + PA    R++ H+    +            S+I F+     +      L  +  
Sbjct: 272 SQQLPAPPAGVQQRRLTHSRGVALQPRHWLRTAPDGSQIAFLMADAGA---VIQLWTVSP 328

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           +G   R +T     I     + P+ Q +A+    D  ++R  +      R  +R     S
Sbjct: 329 NGGEPRQITELSHSIQSAFSWHPDGQSIAF--ICDNSVMRCEVESGTCQRLTRRTEEAPS 386

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSV 287
              A  +S +G +     + +    +++V
Sbjct: 387 GD-AVVWSPDGSQIAFMREVNGWRQLFTV 414


>gi|239931364|ref|ZP_04688317.1| protease [Streptomyces ghanaensis ATCC 14672]
          Length = 1047

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 91/254 (35%), Gaps = 24/254 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +   DG    +   + +  +  PR SP+   VA+++  D     V++         +
Sbjct: 9   DVWLAPLDGGRA-WRVSADNVPVTHPRISPDGTTVAWSSTRDG-APEVHVAPVD-GGPAE 65

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTNTLFINI-- 305
           R+  + ++    R ++ +G+   +S             +V L       L      ++  
Sbjct: 66  RLTYWGNLKTQVRGWTPDGRVLALSAHGQPSLRRTWARAVPLDGGPATTLPYGPVGDVVL 125

Query: 306 SASY----SPDSSQIVFE-SDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                   +P   +  +    R G   +L++ +    +  R+ +D + +   P+W+  G 
Sbjct: 126 GPHTVLLSAPMGREAAWWKRYRGGTAGKLWIDREGDGEFVRLHEDLDGNIEYPLWA--GT 183

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAF        A+     DGS  R         A   +  G  +++S         +L+
Sbjct: 184 RIAFLSDHEGTGALYSSLADGSDLRRHTPLGGFYARHAATDGTRVVYSA------AGELW 237

Query: 420 SI-DLNGRNETLIN 432
            + DL+G     ++
Sbjct: 238 ILDDLDGAEPRRLD 251



 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 63/188 (33%), Gaps = 20/188 (10%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
               + + D    ++   L      R++           SPD + + + S R+G  +++V
Sbjct: 1   MVAFTAEDD----VWLAPLDGGRAWRVSADNVPVTHPRISPDGTTVAWSSTRDGAPEVHV 56

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERLLV 387
              +G   +R++           W+P G ++A +              +  DG     L 
Sbjct: 57  APVDGGPAERLTYWGNLKTQVRGWTPDGRVLALSAHGQPSLRRTWARAVPLDGGPATTLP 116

Query: 388 EDSNLQAP--------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI---NTPAY 436
                           + +P GR   + ++  G T  KL+ ID  G  E +    +    
Sbjct: 117 YGPVGDVVLGPHTVLLS-APMGREAAWWKRYRGGTAGKLW-IDREGDGEFVRLHEDLDGN 174

Query: 437 ASDPQWVG 444
              P W G
Sbjct: 175 IEYPLWAG 182



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 95/306 (31%), Gaps = 25/306 (8%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTP--SRDQI 213
           +++D          G F +R      + V       L ++D  DGA  R L       + 
Sbjct: 200 SLADGSDLRRHTPLGGFYARHAATDGTRVVYSAAGELWILDDLDGAEPRRLDVRLGGQRA 259

Query: 214 LFEP------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPR-F 265
             +P      R+S +      A      +       T      + +     +    PR F
Sbjct: 260 DLQPFPVNAARWSGSASPDHTARGSAVCVRGTVHWVTHRSGPARALAATPGVRARRPRTF 319

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSN-----ATERLTNTL-FINISASYSPDSSQIVFE 319
            +NG+  ++ V   E  D       +         R+        +  + +PD S+    
Sbjct: 320 RANGEEWVVWVTDAEGDDALEFAPATGLAPGATPRRIAAGRLGRVLELAMAPDGSRAAIA 379

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKK 378
           S      ++ +++    + + + + ++       +SP    +A++         + +   
Sbjct: 380 SH---DGRVLLVERETGEVREVDRSEDGDVSGLAFSPDSAWLAWSHPGPRPLSQLRLANT 436

Query: 379 -DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLINTP 434
            D S            AP ++  G+ L F   +  D     +  DL    G    LI   
Sbjct: 437 TDLSVTEATPLRFQDYAPAFTLDGKHLAFLSTRSFDPVYDEHVFDLAFVEGVRPYLITLA 496

Query: 435 AYASDP 440
           A    P
Sbjct: 497 ATTPSP 502


>gi|297199590|ref|ZP_06916987.1| protease [Streptomyces sviceus ATCC 29083]
 gi|297147442|gb|EFH28631.1| protease [Streptomyces sviceus ATCC 29083]
          Length = 290

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 66/188 (35%), Gaps = 16/188 (8%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+    + + D    ++   L      R++           SPD + + + S R+G  ++
Sbjct: 17  GELVAFTAEDD----VWLAPLDGGRAWRVSADNVPVTHPRISPDGTTVAWTSARDGAPEV 72

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL 385
           ++   +G   +R++    A      W+P G+++A T              +  DG     
Sbjct: 73  HIAPVDGGPGRRLTHWGSARTQVRGWTPDGEVLAITTHGQASLRRSWARTVPLDGGPGTT 132

Query: 386 LVEDS---NLQAPTW----SPSGRSLIFSRKKDGDTGSKLYS-IDLNGRNETL-INTPAY 436
           L           P      +P GR   + ++  G T  KL+   D +G    L  +    
Sbjct: 133 LPYGPVGHVAHGPATVILSAPMGREAAWWKRYRGGTAGKLWIDRDGDGEFVRLHDDLDGN 192

Query: 437 ASDPQWVG 444
              P W G
Sbjct: 193 LEYPVWAG 200



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 92/279 (32%), Gaps = 24/279 (8%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +T        R   +   +V+   ++ + +   DG    +   + +  +  PR SP+   
Sbjct: 1   MTQPATSAYLRFPHLRGELVAFTAEDDVWLAPLDGGRA-WRVSADNVPVTHPRISPDGTT 59

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKD---EA 281
           VA+ +    D      +        +R+ ++ S     R ++ +G+   I+         
Sbjct: 60  VAWTS--ARDGAPEVHIAPVDGGPGRRLTHWGSARTQVRGWTPDGEVLAITTHGQASLRR 117

Query: 282 MDIYSVDLQSNATERLTNTL------FINISASYSPDSSQIVFE-SDREGKEQLYVMQSN 334
               +V L       L                  +P   +  +    R G      +  +
Sbjct: 118 SWARTVPLDGGPGTTLPYGPVGHVAHGPATVILSAPMGREAAWWKRYRGGTAGKLWIDRD 177

Query: 335 G-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           G  +  R+  D + +   PVW+  GD IAF        A+     DGS  R         
Sbjct: 178 GDGEFVRLHDDLDGNLEYPVWA--GDRIAFLSDHEGTGAVYSSLADGSDLRRHTPLDGYY 235

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLI 431
           A   +  G  ++++         +L+ + DL+G     +
Sbjct: 236 ARHAAGDGTRVVYTS------AGELWILDDLDGAEPRRL 268


>gi|159028494|emb|CAO87301.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 1165

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 104/317 (32%), Gaps = 42/317 (13%)

Query: 113 TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            G V      +L          ++W V   K +                H   D ++Q  
Sbjct: 670 VGGVTFSPNGQLLASGSADKTIKIWSVDTGKCLHTLT-----------GHQ--DWVWQVA 716

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
               G           +  SG     +  +              +  ++   FSP+ Q +
Sbjct: 717 FSSDGQ--------LLASGSGDKTIKIWSIIEGEYQNIDTLEGHESWIWSIAFSPDGQYI 768

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A  + D      + L   +     +  G + + + +  FS + +  L S   D ++ ++S
Sbjct: 769 ASGSED----FTLRLWSVKTRECLQCFGGYGNRLSSITFSPDSQYIL-SGSIDRSIRLWS 823

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +       +++        S ++SPD   ++  S   G + + +      +  +I Q+K 
Sbjct: 824 I-KNHKCLQQINGHTDWICSVAFSPDGKTLISGS---GDQTIRLWSVESGEVIQILQEKY 879

Query: 347 AS--YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                +    S  G LIA T        +  +K D            + +  +SP+ + L
Sbjct: 880 YWVLLYQVAVSANGQLIASTSHDN-IIKLWDIKTDEKYTFAPEHQKRVWSIAFSPNSQIL 938

Query: 405 IFSRKKDGDTGSKLYSI 421
           +      GD   KL+S+
Sbjct: 939 V---SGSGDNSVKLWSV 952



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 81/237 (34%), Gaps = 13/237 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ +   +     +      + +    FSPN Q +A  + D      + +    
Sbjct: 642 TGSEDKTIKIWSVETGECLHTLEGHQERVGGVTFSPNGQLLASGSADK----TIKIWSVD 697

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATERLTNTLFIN 304
             +    +   +  +    FSS+G+    S   D+ + I+  ++ +    + L       
Sbjct: 698 TGKCLHTLTGHQDWVWQVAFSSDGQLLA-SGSGDKTIKIWSIIEGEYQNIDTLEGHESWI 756

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPD   I   S+      L +      +  +             +SP    I   
Sbjct: 757 WSIAFSPDGQYIASGSE---DFTLRLWSVKTRECLQCFGGYGNRLSSITFSPDSQYILSG 813

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   +  +K     +++      + +  +SP G++LI      GD   +L+S+
Sbjct: 814 SID-RSIRLWSIKNHKCLQQINGHTDWICSVAFSPDGKTLI---SGSGDQTIRLWSV 866



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 71/208 (34%), Gaps = 19/208 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + + +A  + D      + +           +   +  +    FS NG+    S  
Sbjct: 632 AFSADSKFLATGSEDK----TIKIWSVETGECLHTLEGHQERVGGVTFSPNGQLLA-SGS 686

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + I+SVD        LT         ++S D   +   S   G + + +      +
Sbjct: 687 ADKTIKIWSVD-TGKCLHTLTGHQDWVWQVAFSSDGQLLASGS---GDKTIKIWSIIEGE 742

Query: 338 QKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-- 393
            + I      E+  +   +SP G  IA      E F + +      +          +  
Sbjct: 743 YQNIDTLEGHESWIWSIAFSPDGQYIA---SGSEDFTLRLWSVKTRECLQCFGGYGNRLS 799

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + T+SP  + ++       D   +L+SI
Sbjct: 800 SITFSPDSQYILSGSI---DRSIRLWSI 824



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 98/252 (38%), Gaps = 22/252 (8%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLMD 243
             SG     L  ++  G  I+ L      +L      S N Q +A  ++D+     + L D
Sbjct: 855  GSGDQTIRLWSVES-GEVIQILQEKYYWVLLYQVAVSANGQLIASTSHDN----IIKLWD 909

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
             + D         +  + +  FS N  + L+S   D ++ ++SV  +    +        
Sbjct: 910  IKTDEKYTFAPEHQKRVWSIAFSPN-SQILVSGSGDNSVKLWSVP-RGFCLKTFEEHQAW 967

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +S ++S D   I      +   +L+ ++ + +   R  +  +   +  V+S  G  +A 
Sbjct: 968  VLSVNFSLDGKLIA-TGSEDRTIKLWSIEDDMTQSLRTFKGHQGRIWSVVFSSDGQRLA- 1025

Query: 364  TKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +    +   +  +K DG   RL+       S + +  +SP G+ L        D   +++
Sbjct: 1026 SSSDDQTVKVWQVK-DG---RLINSFEGHKSWVWSVAFSPDGKLLA---SGGDDATIRIW 1078

Query: 420  SIDLNGRNETLI 431
             ++  G+   L+
Sbjct: 1079 DVE-TGQLHQLL 1089



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 52/157 (33%), Gaps = 11/157 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              S      L  ++ D              ++   FS + Q++A ++ D      V +  
Sbjct: 982  TGSEDRTIKLWSIEDDMTQSLRTFKGHQGRIWSVVFSSDGQRLASSSDDQ----TVKVWQ 1037

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLF 302
             +  R        +S + +  FS +GK         +   I   D+++    +L      
Sbjct: 1038 VKDGRLINSFEGHKSWVWSVAFSPDGKLLA---SGGDDATIRIWDVETGQLHQLLCQHTK 1094

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               S  +SP+ + +   S+    E + +      + +
Sbjct: 1095 SVRSVCFSPNGNTLASASE---DETIKLWNQKTGECQ 1128


>gi|332662802|ref|YP_004445590.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Haliscomenobacter hydrossis DSM 1100]
 gi|332331616|gb|AEE48717.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 719

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 69/419 (16%), Positives = 127/419 (30%), Gaps = 81/419 (19%)

Query: 65  VSEVVSKDLQR-SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDR 123
            ++V+S   Q  S    +      KQ ++   S    +        + V   +     ++
Sbjct: 14  FAQVISSSAQNGSQKIQVTDLTRIKQVVSVAASPDGTKA-------MYVLRTIEPNADNK 66

Query: 124 LRVEFR--LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
           L  ++R  L+ V  +   + K       S           I   +    G     I FV 
Sbjct: 67  LEYDYRNHLYLVDLQANAVSKALTRGSES-----------ISGPVFAPDG---KSIAFV- 111

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-------- 233
               +   K  + +M  DG    +           PRFSP+ +K+ ++   +        
Sbjct: 112 ---RAVKSKPQVFIMPLDGGEA-WQLTDVSYGAGNPRFSPDGRKILFSVSLNLSSLLADT 167

Query: 234 --EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK--RALISVQKD---------- 279
                  V          PK     R   + P    +G        + KD          
Sbjct: 168 LLNPSKGVPAWSMEKPGFPKNEFLNRDKKIKPN--PDGNLDEIRAYLDKDVEDRKAKVFN 225

Query: 280 --------------EAMDIYSVDL-QSNATERLTNTLFINISASYSPDSSQIVFES---- 320
                             ++ +++ +      LT   +      +SPD  +I   +    
Sbjct: 226 RLNFQGEAMVEPEISFNHLFVIEVKEGAKATPLTKGFWSYGQGGWSPDGQRIWAVTGKDR 285

Query: 321 ----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---AI 373
               DRE +  +  M  NG D+K I  +K+ S+     SP G  +     +        I
Sbjct: 286 TQHPDREQESTIVSMNLNGGDEKTILAEKDKSFGGYDLSPDGKTLVAIMSTPNLLSFSQI 345

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +    G+  + +  D       WS  G+ +  +   +G  G  +Y ID   R    + 
Sbjct: 346 VMADASGANLQTVAFDRTANGANWSRDGKYVYLTAPSNG--GVPVYRIDAKTRKVEQLG 402



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 97/307 (31%), Gaps = 59/307 (19%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +N L ++D     +        + +  P F+P+ + +A+     +   +V++M      
Sbjct: 71  YRNHLYLVDLQANAVSKALTRGSESISGPVFAPDGKSIAFVR-AVKSKPQVFIMPLDGGE 129

Query: 249 APKRIGNFRSMILAPRFSSNGKRA------------------------LISVQKDEAMDI 284
           A + + +       PRFS +G++                           S++K      
Sbjct: 130 AWQ-LTDVSYGAGNPRFSPDGRKILFSVSLNLSSLLADTLLNPSKGVPAWSMEKPGFPKN 188

Query: 285 YSVDLQ-------SNATERLTNTLFINISASYSPDSSQIVFES-DREGK---------EQ 327
             ++             + +   L  ++      D    VF   + +G+           
Sbjct: 189 EFLNRDKKIKPNPDGNLDEIRAYLDKDVE-----DRKAKVFNRLNFQGEAMVEPEISFNH 243

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--------IGVMKKD 379
           L+V++     +         SY    WSP G  I                   I  M  +
Sbjct: 244 LFVIEVKEGAKATPLTKGFWSYGQGGWSPDGQRIWAVTGKDRTQHPDREQESTIVSMNLN 303

Query: 380 GSQERLLV--EDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           G  E+ ++  +D +      SP G++ +      +  + S++   D +G N   +     
Sbjct: 304 GGDEKTILAEKDKSFGGYDLSPDGKTLVAIMSTPNLLSFSQIVMADASGANLQTVAFDRT 363

Query: 437 ASDPQWV 443
           A+   W 
Sbjct: 364 ANGANWS 370



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 89/222 (40%), Gaps = 12/222 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK-VAYATYDDEDILRVYLMD 243
                ++++  M+ +G + + +   +D+       SP+ +  VA  +  +       +M 
Sbjct: 289 PDREQESTIVSMNLNGGDEKTILAEKDKSFGGYDLSPDGKTLVAIMSTPNLLSFSQIVMA 348

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  + +   R+   A  +S +GK   ++   +  + +Y +D ++   E+L +    
Sbjct: 349 DASGANLQTVAFDRTANGA-NWSRDGKYVYLTAPSNGGVPVYRIDAKTRKVEQLGDFES- 406

Query: 304 NISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLI 361
            +SA +   SS++V+  +D      LY       +  ++++  EA   D   S P+    
Sbjct: 407 GVSA-FDLTSSKVVYAKTDVLNPSDLYFADLTLKNPVQLTRLNEAWLKDKKLSLPEKR-- 463

Query: 362 AFTKFSGEKFAIGVMKKD----GSQERLLVEDSNLQAPTWSP 399
            +T   G+K    +MK      G +  L+++        W P
Sbjct: 464 VYTNSKGQKVEYWIMKPSFMEAGKKYPLVLQLHGGPTAMWGP 505



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 47/127 (37%), Gaps = 17/127 (13%)

Query: 333 SNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFS-----------GEKFAIGVMKKDG 380
            NGS + +++             SP G    +   +             +  + ++    
Sbjct: 23  QNGSQKIQVTDLTRIKQVVSVAASPDGTKAMYVLRTIEPNADNKLEYDYRNHLYLVDLQA 82

Query: 381 SQE-RLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYA 437
           +   + L   S ++  P ++P G+S+ F R     +  +++ + L+G     L +    A
Sbjct: 83  NAVSKALTRGSESISGPVFAPDGKSIAFVRAV--KSKPQVFIMPLDGGEAWQLTDVSYGA 140

Query: 438 SDPQWVG 444
            +P++  
Sbjct: 141 GNPRFSP 147


>gi|332711178|ref|ZP_08431111.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332349992|gb|EGJ29599.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1197

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 55/364 (15%), Positives = 130/364 (35%), Gaps = 52/364 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK--- 170
           G ++  G +   +  RLW+V   + +  K      +  + +A +   +I  S + ++   
Sbjct: 623 GEILASGSNDQTI--RLWNVHTGQCL--KTLRGHTSWVQSLAFSPEGEILASGSHDQTVK 678

Query: 171 ------------------GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
                               F +     ++++V+G    ++ V D +  +   +      
Sbjct: 679 LWNVHTGKCLQTLSGHSNPVFFTTFTPNAQTLVTGGEDQTVRVWDVNTGSCLQVLEIPIN 738

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +     SP+ + +A  +    D   V   D       K + ++ S + +  FS +GK  
Sbjct: 739 WVLSIALSPDGETLATGS----DGTTVKFWDLASGECIKTLPDYNSHVWSVAFSPDGKTL 794

Query: 273 LISVQKDEAMDIYSVDLQSNA----TERLTNTLFINISAS--Y----SPDSSQIVFESDR 322
           + +  +D  + I+  D+ +          +N+   N  AS  +    +PD   ++  S+ 
Sbjct: 795 V-TGSEDTTVKIW--DVATGKCLQTLHEYSNSPLGNSYASRIWLVAVNPDGQTLLSVSE- 850

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              + + +   +     R             +SP G ++A +    E   + +   D  Q
Sbjct: 851 --NQTMKLWDIHTGQCLRTVYGYSNWILSVAFSPDGQMLASSS---EDQRVILWDSDTGQ 905

Query: 383 -ERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             + L    + + + T++P    ++ S     DT  KL+  +     +TL    ++    
Sbjct: 906 CLQTLSGHTNLVSSVTFAPKDDQILASSSD--DTTIKLWDANTGECLQTLWGHDSWVHAV 963

Query: 441 QWVG 444
            +  
Sbjct: 964 SFSP 967



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 108/281 (38%), Gaps = 22/281 (7%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL--T 207
           +  ++    +D    ++T   G   S        +++  + N + + D   ANI+ +   
Sbjct: 550 NLHRVNFANADLSKSALTRTLGGVLSATFSPDGKLLATSVDNEIWLWDV--ANIKQIITC 607

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                 +     SP  + +A  + D      + L +    +  K +    S + +  FS 
Sbjct: 608 NGHTAWVQSLAVSPEGEILASGSNDQ----TIRLWNVHTGQCLKTLRGHTSWVQSLAFSP 663

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            G   L S   D+ + +++V       + L+         +++P++  +V      G++Q
Sbjct: 664 EG-EILASGSHDQTVKLWNV-HTGKCLQTLSGHSNPVFFTTFTPNAQTLV----TGGEDQ 717

Query: 328 -LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + V   N     ++ +           SP G+ +A T   G       +   G   + L
Sbjct: 718 TVRVWDVNTGSCLQVLEIPINWVLSIALSPDGETLA-TGSDGTTVKFWDL-ASGECIKTL 775

Query: 387 VE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            + +S++ +  +SP G++L+   +   DT  K++ +   G+
Sbjct: 776 PDYNSHVWSVAFSPDGKTLVTGSE---DTTVKIWDV-ATGK 812



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 79/239 (33%), Gaps = 19/239 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ + D +           D  +    FSP  + +A A+ D      V L D  
Sbjct: 932  SSSDDTTIKLWDANTGECLQTLWGHDSWVHAVSFSPEGEILASASRDQ----TVKLWDWH 987

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
                   +      +    FS  GK  L S   D  + ++  D+ +    + L       
Sbjct: 988  TGECLHTLEGHIHHVKTISFSPCGK-ILASGSHDNTIKLW--DVSTGTCLQTLPGQGDWV 1044

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +S  +SP  + +   S   G + + +         +      +      +SP G  +A  
Sbjct: 1045 LSVVFSPGGNLLASAS---GDQTIKLWDVETGQCLQTLSGHTSRVRTIAFSPDGKSLASG 1101

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    + +          L +  +  +++  +SP+ R ++ S  +  D   KL+ +
Sbjct: 1102 SDDQT---VQLWDISTGTVLKLFQGHHKAIRSIAFSPN-RPVLVSSSE--DETIKLWDV 1154



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 56/328 (17%), Positives = 105/328 (32%), Gaps = 47/328 (14%)

Query: 127 EFRLWDVKDRKQIIG--------KKFFSSPASWRKIAHTISDDIY--------QSITGEK 170
           E  LWDV + KQII         +    SP     +A   +D           Q +   +
Sbjct: 592 EIWLWDVANIKQIITCNGHTAWVQSLAVSPEG-EILASGSNDQTIRLWNVHTGQCLKTLR 650

Query: 171 G--DFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           G   +   + F  E     SG    ++ + +                +F   F+PN Q +
Sbjct: 651 GHTSWVQSLAFSPEGEILASGSHDQTVKLWNVHTGKCLQTLSGHSNPVFFTTFTPNAQTL 710

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                   +   V + D       + +    + +L+   S +G+    +      +  + 
Sbjct: 711 V----TGGEDQTVRVWDVNTGSCLQVLEIPINWVLSIALSPDGETLA-TGSDGTTVKFW- 764

Query: 287 VDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            DL S    + L +      S ++SPD   +V  S+      + +         +   + 
Sbjct: 765 -DLASGECIKTLPDYNSHVWSVAFSPDGKTLVTGSE---DTTVKIWDVATGKCLQTLHEY 820

Query: 346 -----EASYFDPVW----SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-AP 395
                  SY   +W    +P G  +       +   +  +   G   R +   SN   + 
Sbjct: 821 SNSPLGNSYASRIWLVAVNPDGQTLLSVS-ENQTMKLWDIHT-GQCLRTVYGYSNWILSV 878

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +SP G+ L  S +   D    L+  D 
Sbjct: 879 AFSPDGQMLASSSE---DQRVILWDSDT 903



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 13/153 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG   N++ + D          P +   +    FSP    +A A+ D      + L D  
Sbjct: 1016 SGSHDNTIKLWDVSTGTCLQTLPGQGDWVLSVVFSPGGNLLASASGDQ----TIKLWDVE 1071

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFI 303
              +  + +    S +    FS +GK    S   D+ + ++  D+ +    +L   +   I
Sbjct: 1072 TGQCLQTLSGHTSRVRTIAFSPDGKSLA-SGSDDQTVQLW--DISTGTVLKLFQGHHKAI 1128

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              S ++SP+  + V  S  E  E + +      
Sbjct: 1129 -RSIAFSPN--RPVLVSSSE-DETIKLWDVETG 1157


>gi|308049480|ref|YP_003913046.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ferrimonas balearica DSM 9799]
 gi|307631670|gb|ADN75972.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ferrimonas balearica DSM 9799]
          Length = 675

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 85/252 (33%), Gaps = 34/252 (13%)

Query: 218 RFSPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             SP+   V YA    D D  +  L    +    +R+   +    +  F+++GK      
Sbjct: 38  ALSPDGSTVVYAIKTVDGDHSQSDLYRQVVGGEAQRLTFDKGTEHSVAFAADGKGIYFLA 97

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +     ++ + L      ++++         +     Q+V +   +         +  +
Sbjct: 98  ARSGTTQLWYLPLAGGEARQVSDLPLNVDGFKFDNAGQQVVLQLRVDPACDTLACSAEKA 157

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKKDG---SQERLLVED 389
           + K   +     Y           + +  +     G +  + V K DG   S+   +   
Sbjct: 158 EAKAEQKTTGQHYTG---------LMYRHWDTWTDGLRNHLFVAKLDGDTLSEPVDVTAG 208

Query: 390 SNLQAP----------TWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNGRNETLIN-- 432
            + + P          +++P G+ ++++ K  G      T   L+ + + G +   +   
Sbjct: 209 LDTEVPPLPFSGLEEVSFTPDGKHVVYAAKAPGRDQSWHTNYDLWQVPVAGGDAVNLTAD 268

Query: 433 TPAYASDPQWVG 444
            PA+ S P +  
Sbjct: 269 NPAWDSHPTFSA 280



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/338 (13%), Positives = 105/338 (31%), Gaps = 60/338 (17%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           L  G   +     L V+   +D   ++ ++  +   +  +    A        Q  T   
Sbjct: 110 LAGGEARQVSDLPLNVDGFKFDNAGQQVVLQLRVDPACDTLACSAEKAEAKAEQKTT--- 166

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   + +++      +  ++N L V   DG             L EP             
Sbjct: 167 GQHYTGLMYRHWDTWTDGLRNHLFVAKLDG-----------DTLSEP------------- 202

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-------AMD 283
                      +D       +      S +    F+ +GK  + + +            D
Sbjct: 203 -----------VDVTAGLDTEVPPLPFSGLEEVSFTPDGKHVVYAAKAPGRDQSWHTNYD 251

Query: 284 IYSVDLQSNATERLT-NTLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSN 334
           ++ V +       LT +    +   ++S D   +         +E+DR    ++ +    
Sbjct: 252 LWQVPVAGGDAVNLTADNPAWDSHPTFSADGQFMAWMAMSIPGYEADR---FRVMLKDLR 308

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
             + K ++   + S     +    + +  T     + +I  M         LV + +   
Sbjct: 309 SGEVKELAPGWDRSAGSIAFGDDSNTLFVTTQDLGQVSIYAMDTRFGDRITLVNEGSNSL 368

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              +  G  ++++R       + LY +D  GRN+T + 
Sbjct: 369 QAAA--GGKVLYTRNTL-HEPTDLYLMDEGGRNQTRLT 403



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 61/185 (32%), Gaps = 8/185 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G              S      L  +   G +   LT         P FS + 
Sbjct: 223 EVSFTPDGKHVVYAAKAPGRDQSWHTNYDLWQVPVAGGDAVNLTADNPAWDSHPTFSADG 282

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           Q +A+          D  RV L D R     +    +     +  F  +     ++ Q  
Sbjct: 283 QFMAWMAMSIPGYEADRFRVMLKDLRSGEVKELAPGWDRSAGSIAFGDDSNTLFVTTQDL 342

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQ 338
             + IY++D +      L N    ++ A+      ++++  +   +   LY+M   G +Q
Sbjct: 343 GQVSIYAMDTRFGDRITLVNEGSNSLQAA---AGGKVLYTRNTLHEPTDLYLMDEGGRNQ 399

Query: 339 KRISQ 343
            R++Q
Sbjct: 400 TRLTQ 404



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/330 (13%), Positives = 105/330 (31%), Gaps = 73/330 (22%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S +++  ++V     ++ L      G   R              F+ + + + +      
Sbjct: 44  STVVYAIKTVDGDHSQSDLYRQVVGGEAQRLTFD--KGTEHSVAFAADGKGIYFLAARSG 101

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD----------- 283
                YL         +++ +    +   +F + G++ ++ ++ D A D           
Sbjct: 102 TTQLWYL--PLAGGEARQVSDLPLNVDGFKFDNAGQQVVLQLRVDPACDTLACSAEKAEA 159

Query: 284 -----------------------------IYSVDLQS---NATERLTNTLFINISA---- 307
                                        ++   L     +    +T  L   +      
Sbjct: 160 KAEQKTTGQHYTGLMYRHWDTWTDGLRNHLFVAKLDGDTLSEPVDVTAGLDTEVPPLPFS 219

Query: 308 -----SYSPDSSQIVFESDREGKEQ-------LYVMQSNGSDQKRISQDKEASYFDPVWS 355
                S++PD   +V+ +   G++Q       L+ +   G D   ++ D  A    P +S
Sbjct: 220 GLEEVSFTPDGKHVVYAAKAPGRDQSWHTNYDLWQVPVAGGDAVNLTADNPAWDSHPTFS 279

Query: 356 PQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSR 408
             G  +A+   S      ++F + +      + + L    +  A +  +     +L  + 
Sbjct: 280 ADGQFMAWMAMSIPGYEADRFRVMLKDLRSGEVKELAPGWDRSAGSIAFGDDSNTLFVTT 339

Query: 409 KKDGDTGSKLYSIDLN-GRNETLINTPAYA 437
           +  G     +Y++D   G   TL+N  + +
Sbjct: 340 QDLGQV--SIYAMDTRFGDRITLVNEGSNS 367


>gi|329851215|ref|ZP_08265972.1| prolyl oligopeptidase family protein [Asticcacaulis biprosthecum
           C19]
 gi|328840061|gb|EGF89633.1| prolyl oligopeptidase family protein [Asticcacaulis biprosthecum
           C19]
          Length = 658

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 79/232 (34%), Gaps = 17/232 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++PN + +   T          L         +R  +F +  ++  +S  G   +    
Sbjct: 77  SWNPNDKSMLITT---RFGNTAQLHQVAGPMMDRRQISFEAEPVSGSWSPKGDVLITQKD 133

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQS-N 334
                      L+      LT+    N   ++S D     + S R       +Y++   +
Sbjct: 134 TGGNEFFQLYRLKDGRLTLLTDAKSRNSGNAWSQDGQYFAYTSTRRNGSDNDIYIIDPRD 193

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERL---LVEDS 390
            +  + ++Q K   +    ++P G      ++ S  K  + V+            L +D 
Sbjct: 194 PASNRLVAQVKGGGWRLSDFAPDGKTAVVAEYLSVTKSNLYVLDIASGVMTPIGDLKKDI 253

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           +     ++P G+  ++    +G    +L  +D+     T       + +P+W
Sbjct: 254 SYGGAEFAPDGK--LWVTSDEGSDFQRLGVLDVKTGKFTP-----KSPEPKW 298



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 91/270 (33%), Gaps = 12/270 (4%)

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD--DIYQSITGEKGDFNSRILFVSE 182
              F  W+  D+  +I  +F  + A   ++A  + D   I        G ++ +   +  
Sbjct: 72  TASFASWNPNDKSMLITTRF-GNTAQLHQVAGPMMDRRQISFEAEPVSGSWSPKGDVLIT 130

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYL 241
              +G  +       +DG     L            +S + Q  AY +   +     +Y+
Sbjct: 131 QKDTGGNEFFQLYRLKDG--RLTLLTDAKSRNSGNAWSQDGQYFAYTSTRRNGSDNDIYI 188

Query: 242 MDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTN 299
           +D R   + + +   +        F+ +GK A+++        ++Y +D+ S     + +
Sbjct: 189 IDPRDPASNRLVAQVKGGGWRLSDFAPDGKTAVVAEYLSVTKSNLYVLDIASGVMTPIGD 248

Query: 300 TLFI--NISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                    A ++PD    V  SD     ++L V+          S + +        + 
Sbjct: 249 LKKDISYGGAEFAPDGKLWV-TSDEGSDFQRLGVLDVKTGKFTPKSPEPKWDIQSFDIAD 307

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            G  + ++        + VM       R +
Sbjct: 308 DGSFLVYSINEAGAEKVKVMDLKTGAVRTV 337



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 53/355 (14%), Positives = 127/355 (35%), Gaps = 52/355 (14%)

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
               S +++     +   + ++     ++  + ++ P    W+  G  VL+T      G 
Sbjct: 80  PNDKSMLITTRFGNTAQLHQVAGPMMDRRQISFEAEPVSGSWSPKG-DVLIT--QKDTGG 136

Query: 122 DRLRVEFRLWDVKDRKQ--IIGKKFFSSPASWRKIAHTIS----------DDIYQSITGE 169
           +     F+L+ +KD +   +   K  +S  +W +     +          +DIY  I   
Sbjct: 137 NEF---FQLYRLKDGRLTLLTDAKSRNSGNAWSQDGQYFAYTSTRRNGSDNDIY--IIDP 191

Query: 170 KGDFNSRILFVSESV--------VSGII----------KNSLCVMDRDGANIRYLTPSRD 211
           +   ++R++   +            G            K++L V+D     +  +   + 
Sbjct: 192 RDPASNRLVAQVKGGGWRLSDFAPDGKTAVVAEYLSVTKSNLYVLDIASGVMTPIGDLKK 251

Query: 212 QILFEPR-FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            I +    F+P+  K+   + +  D  R+ ++D +  +   +    +  I +   + +G 
Sbjct: 252 DISYGGAEFAPDG-KLWVTSDEGSDFQRLGVLDVKTGKFTPKSPEPKWDIQSFDIADDGS 310

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREGK 325
             + S+ +  A  +  +DL++ A   +      N   I+I+  +      + F S R   
Sbjct: 311 FLVYSINEAGAEKVKVMDLKTGAVRTVEDLPAGNVGGIDIAP-WGTIG--LTFTSARSAA 367

Query: 326 EQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +  Y +        R +Q +           P  + +    F GE  +  + + D
Sbjct: 368 DA-YSIDPKTLAVTRWTQSETGGLDVTKNVEP--EFVEVKSFDGEPVSGFLYRPD 419


>gi|55378825|ref|YP_136675.1| hypothetical protein rrnAC2119 [Haloarcula marismortui ATCC 43049]
 gi|55231550|gb|AAV46969.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 635

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 95/258 (36%), Gaps = 9/258 (3%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             +N L V+D +       +         +   +  + ++V +   DD +     +    
Sbjct: 43  SGRNELHVLDVEAGTHEQWSDGDVPRNARWHVEWDADGERVFFHLDDDGNEQN-DVYAID 101

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            D + + +      ++      +G+  L+   +D  M++YS  L S  T ++T+      
Sbjct: 102 RDGSVEAVVEMDGQVVLQDVGEDGETLLVGSTRDGQMNLYSHHLGSGETSKITDYDRAVH 161

Query: 306 SASYSPDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLI 361
           +   SPD SQ+ + ++         +YV  ++ SD + +      +   P  W P GD +
Sbjct: 162 TGLLSPDGSQLAYATNETDDFDNMDVYVSDADESDPETLEIGVTGAEAAPADWGPDGDRL 221

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                S +    GV   +  +      +   +     P G+  +  R ++      +Y I
Sbjct: 222 LVVDNSEDLSRSGVYDLETDEVTWFGGEYEEEPQALLPDGKRFLAVRTREATKLPVVYGI 281

Query: 422 DLNGRNETLINTPAYASD 439
           +     E  ++ PA  + 
Sbjct: 282 ETGDARE--LDLPAGVAS 297



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 80/222 (36%), Gaps = 11/222 (4%)

Query: 212 QILFEPRFSPNQQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             L  P  SP+  +VA Y      + L V  ++             R+      + ++G+
Sbjct: 22  PTLAHPTASPDGSEVACYYDVSGRNELHVLDVEAGTHEQWSDGDVPRNARWHVEWDADGE 81

Query: 271 RALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           R    +  D     D+Y++D    + E +       +      D   ++  S R+G+  L
Sbjct: 82  RVFFHLDDDGNEQNDVYAIDRD-GSVEAVVEMDGQVVLQDVGEDGETLLVGSTRDGQMNL 140

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQERL 385
           Y       +  +I+ D + +    + SP G  +A+     + F    + V   D S    
Sbjct: 141 YSHHLGSGETSKIT-DYDRAVHTGLLSPDGSQLAYATNETDDFDNMDVYVSDADESDPET 199

Query: 386 L---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           L   V  +      W P G  L+     +  + S +Y ++ +
Sbjct: 200 LEIGVTGAEAAPADWGPDGDRLLVVDNSEDLSRSGVYDLETD 241



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 4/94 (4%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAPTWSPSGRS 403
           +   P  SP G  +A       +  + V+  +        +     +      W   G  
Sbjct: 23  TLAHPTASPDGSEVACYYDVSGRNELHVLDVEAGTHEQWSDGDVPRNARWHVEWDADGER 82

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           + F    DG+  + +Y+ID +G  E ++      
Sbjct: 83  VFFHLDDDGNEQNDVYAIDRDGSVEAVVEMDGQV 116


>gi|327304877|ref|XP_003237130.1| WD-40 repeat protein [Trichophyton rubrum CBS 118892]
 gi|326460128|gb|EGD85581.1| WD-40 repeat protein [Trichophyton rubrum CBS 118892]
          Length = 1538

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/326 (17%), Positives = 107/326 (32%), Gaps = 59/326 (18%)

Query: 141  GKKFFSSPASWRKIAHTISD-DIYQSITGEKG--DFNSRILFVSESV--VSGIIKNSLCV 195
            G++  +S +S R I   I D D  + IT  KG  D+ + I F   SV   SG    ++ +
Sbjct: 796  GQRHLASASSDRTI--RIWDVDDGRCITILKGHSDWVNSISFKQNSVYLASGSSDKTVRI 853

Query: 196  MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
             D   +    +       +    FS N + +A A+ D    ++++  D    +  + + +
Sbjct: 854  WDVATSTCVKVLQGHTNWINSVAFSHNGKYLASASNDAS--IKIWNSD---GKCEQTLRS 908

Query: 256  FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                + A  FS + +R  IS   D  + ++ + +       ++       S ++S D   
Sbjct: 909  HSWTVTALAFSPDDQRL-ISGSSDRTIKVWDMSIIGKNMRVVSAHDKWVDSLTFSRDGKF 967

Query: 316  IV---------------------------------FESD-----REGKEQLYVMQSNGSD 337
            I                                  F SD             +      +
Sbjct: 968  IASISDDWTLMIWSATTGEYMHTLGSHKDMLNGLCFSSDTHLASASSDRTARIWDITTGE 1027

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--P 395
             K   +  E       +SP G L+  +        + V + D      L E         
Sbjct: 1028 CKETLEGHEDCVNSVDFSPDGSLLVSSS---GDHTVRVWEVDTGMCIQLFEGHTDSVGTA 1084

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +S  G+ +  S +   D   +++S 
Sbjct: 1085 VFSTDGQYIASSSR---DKSVRIWST 1107



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 90/243 (37%), Gaps = 19/243 (7%)

Query: 182  ESVVSGIIKNSLCVMDRD--GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            + ++SG    ++ V D    G N+R ++   D+ +    FS + + +A  + D      +
Sbjct: 923  QRLISGSSDRTIKVWDMSIIGKNMRVVSA-HDKWVDSLTFSRDGKFIASISDD----WTL 977

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLT 298
             +           +G+ + M+    FSS+    L S   D    I+  D+ +    E L 
Sbjct: 978  MIWSATTGEYMHTLGSHKDMLNGLCFSSD--THLASASSDRTARIW--DITTGECKETLE 1033

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   S  +SPD S +V  S   G   + V + +     ++ +    S    V+S  G
Sbjct: 1034 GHEDCVNSVDFSPDGSLLVSSS---GDHTVRVWEVDTGMCIQLFEGHTDSVGTAVFSTDG 1090

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              IA +    +   I    +      L   D  + +  +S   + +  +     D   ++
Sbjct: 1091 QYIA-SSSRDKSVRIWSTAEVECVWVLNGHDGWVNSAVFSDDSQFVASTST---DKTVRI 1146

Query: 419  YSI 421
            + +
Sbjct: 1147 WHV 1149


>gi|294626786|ref|ZP_06705379.1| dipeptidyl peptidase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
 gi|292598902|gb|EFF43046.1| dipeptidyl peptidase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 11122]
          Length = 789

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 90/214 (42%), Gaps = 17/214 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATE---RLT 298
            + +RA +   +      A  +S +G+   + ++  +  D +   VDL +   +   RL+
Sbjct: 322 LKGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDLDNARLQPRHRLS 381

Query: 299 NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++ +IN   +   + PD+  +   S+  G  QLY ++ +G  ++R     +     PV S
Sbjct: 382 DSAWINWDFNDFGWLPDNRTLWLLSEESGYSQLYTVEGDGKPRQR--TRGKWEVSMPVPS 439

Query: 356 PQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  + F         + +  +     Q   +   + ++  + SP+G+ L+  R     
Sbjct: 440 ADGSGMFFLCNQKWPGDYEVCKLDLRNDQLTEITALNGVEGYSLSPNGQQLL-VRYSGSY 498

Query: 414 TGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
             ++L  +   G   T++    TPA+ + P W+ 
Sbjct: 499 LPTQLAVVPAAGGQATVLTDTRTPAFKAQP-WIA 531



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 16/142 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--S 258
           A+  ++ PS DQ      +  + ++V Y    D   +R            +R+ +     
Sbjct: 31  ADPDWIGPSVDQA----WWQWDGKQVQYLLKRDGSPVRDTYRQGTGGGTAERVADTARAG 86

Query: 259 MILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +  A P + +  +R L +   D    I+  DL++ A  +LT +  I     ++ D   I 
Sbjct: 87  LDAANPSYDATRQRMLFARNGD----IFLRDLRTGALTQLTRSNEIESRPQFASDGGAIW 142

Query: 318 FESDREGKEQLYVMQSNGSDQK 339
               R G    Y  +++G   +
Sbjct: 143 ----RAGNN-WYHWRADGGTAQ 159



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/369 (14%), Positives = 110/369 (29%), Gaps = 85/369 (23%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +D   ++ +  +         R  A T        +T    +  SR  F S+        
Sbjct: 94  YDATRQRMLFARNGDIFLRDLRTGALT-------QLT-RSNEIESRPQFASDGGAIWRAG 145

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPN-----QQKVAYATYDDEDILRVYLMDTR 245
           N+      DG   +      ++   +P  +P      +Q++A       D  +   + T+
Sbjct: 146 NNWYHWRADGGTAQVAVVKAER---DPNAAPKADVLREQQLATLATLRRDKEQRDALRTQ 202

Query: 246 IDRAPKRIGNFRSM---------ILAPRFSSNGKRALISVQKDEAMD------------- 283
            D   +      +          I+    S +G+  L+  Q   A +             
Sbjct: 203 EDAWRRADATRAAAPVYLGDEVEIVDSALSPDGRHLLVVTQAKSADEGQAGKMPKYVTES 262

Query: 284 ---------------------IYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFES 320
                                ++ VD+ +   + L+      I+           +    
Sbjct: 263 GYEEFQEVRTRVGRNAPAAHALWLVDVGAGTAKTLSFDPLPGISTDP--------LAALR 314

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKK 378
               ++ L      G+   R+  D + S     WS  G  +A        +   I  +  
Sbjct: 315 KTAKRDAL-----KGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDL 369

Query: 379 DGSQER---LLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           D ++ +    L + + +        W P  R+L    ++ G   S+LY+++ +G+     
Sbjct: 370 DNARLQPRHRLSDSAWINWDFNDFGWLPDNRTLWLLSEESG--YSQLYTVEGDGKPRQRT 427

Query: 432 NTPAYASDP 440
                 S P
Sbjct: 428 RGKWEVSMP 436



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 61/191 (31%), Gaps = 17/191 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-------PNQQKV 226
           + R + V    V    +    +   D  N R     R        +        P+ + +
Sbjct: 346 DGRNVAVEIRAVDNKDR---WIASVDLDNARLQPRHRLSDSAWINWDFNDFGWLPDNRTL 402

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDI 284
              + +        L     D  P++    +  +  P  S++G        +      ++
Sbjct: 403 WLLSEESG---YSQLYTVEGDGKPRQRTRGKWEVSMPVPSADGSGMFFLCNQKWPGDYEV 459

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQ 343
             +DL+++    +T    +    S SP+  Q++          QL V+ + G     ++ 
Sbjct: 460 CKLDLRNDQLTEITALNGVEGY-SLSPNGQQLLVRYSGSYLPTQLAVVPAAGGQATVLTD 518

Query: 344 DKEASYFDPVW 354
            +  ++    W
Sbjct: 519 TRTPAFKAQPW 529


>gi|21244823|ref|NP_644405.1| dipeptidyl peptidase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21110525|gb|AAM38941.1| dipeptidyl peptidase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 800

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 90/214 (42%), Gaps = 17/214 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATE---RLT 298
            + +RA +   +      A  +S +G+   + ++  +  D +   VDL +   +   RL+
Sbjct: 333 LKGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDLDNARLQPRHRLS 392

Query: 299 NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++ +IN   +   + PD+  +   S+  G  QLY ++ NG  ++R     +     PV S
Sbjct: 393 DSAWINWDFNDFGWLPDNRTLWLLSEESGYSQLYTVEGNGKPRQR--TRGKWEVSMPVPS 450

Query: 356 PQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  + F         + +  +     Q   +   + ++  + SP+G+ L+  R     
Sbjct: 451 ADGSGMFFLCNQKWPGDYEVCKLDLRNDQLTEITALNGVEGYSLSPNGQQLL-VRYSGSY 509

Query: 414 TGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
             ++L  +   G   T++    TPA+ + P W+ 
Sbjct: 510 LPTQLAVVPAAGGQATVLTDTRTPAFKAQP-WIA 542



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 16/142 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--S 258
           A+  ++ PS DQ      +  + ++V Y    D   +R            +R+ +     
Sbjct: 42  ADPDWIGPSVDQA----WWQWDGKQVQYLLKRDGSPVRDTYRQGTGGGTAERVADAARAG 97

Query: 259 MILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +  A P + +  +R L +   D    I+  DL++ A  +LT +  I     ++ D   I 
Sbjct: 98  LDAANPSYDATRQRMLFARNGD----IFLRDLRTGALTQLTRSNEIESRPQFASDGGAIW 153

Query: 318 FESDREGKEQLYVMQSNGSDQK 339
               R G    Y  +++G   +
Sbjct: 154 ----RAGNN-WYHWRADGGTAQ 170



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 53/369 (14%), Positives = 108/369 (29%), Gaps = 85/369 (23%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +D   ++ +  +         R  A T        +T    +  SR  F S+        
Sbjct: 105 YDATRQRMLFARNGDIFLRDLRTGALT-------QLT-RSNEIESRPQFASDGGAIWRAG 156

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-----QKVAYATYDDEDILRVYLMDTR 245
           N+      DG   +      ++   +P  +P       Q++A       D  +   + T+
Sbjct: 157 NNWYHWRADGGTAQVAVVKAER---DPNAAPKADVLRDQQLATLATLRRDKEQRDALRTQ 213

Query: 246 IDRAPKRIGNFRSM---------ILAPRFSSNGKRALISVQKDEAMD------------- 283
            D   +      +          I+    S +G+  L+  Q   A +             
Sbjct: 214 EDAWRRADATRAAAPVYLGDEVEIVDSALSPDGRHLLVVTQAKSADEGQAGKMPKYVTES 273

Query: 284 ---------------------IYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFES 320
                                ++ VD+ +     L+      I                +
Sbjct: 274 GYEEFQEVRTRVGRNAPAAHALWLVDVGAGTARSLSFDPLPGIATDP----------LAA 323

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKK 378
            R+  ++       G+   R+  D + S     WS  G  +A        +   I  +  
Sbjct: 324 LRKAAKRD---PLKGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDL 380

Query: 379 DGSQER---LLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           D ++ +    L + + +        W P  R+L    ++ G   S+LY+++ NG+     
Sbjct: 381 DNARLQPRHRLSDSAWINWDFNDFGWLPDNRTLWLLSEESG--YSQLYTVEGNGKPRQRT 438

Query: 432 NTPAYASDP 440
                 S P
Sbjct: 439 RGKWEVSMP 447



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 61/191 (31%), Gaps = 17/191 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-------PNQQKV 226
           + R + V    V    +    +   D  N R     R        +        P+ + +
Sbjct: 357 DGRNVAVEIRAVDNKDR---WIASVDLDNARLQPRHRLSDSAWINWDFNDFGWLPDNRTL 413

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDI 284
              + +        L     +  P++    +  +  P  S++G        +      ++
Sbjct: 414 WLLSEESG---YSQLYTVEGNGKPRQRTRGKWEVSMPVPSADGSGMFFLCNQKWPGDYEV 470

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQ 343
             +DL+++    +T    +    S SP+  Q++          QL V+ + G     ++ 
Sbjct: 471 CKLDLRNDQLTEITALNGVEGY-SLSPNGQQLLVRYSGSYLPTQLAVVPAAGGQATVLTD 529

Query: 344 DKEASYFDPVW 354
            +  ++    W
Sbjct: 530 TRTPAFKAQPW 540


>gi|257095115|ref|YP_003168756.1| WD-40 repeat-containing protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047639|gb|ACV36827.1| WD-40 repeat protein [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 1347

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/321 (14%), Positives = 100/321 (31%), Gaps = 50/321 (15%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWDV   +++              + HT    +  +     G          ++V++  
Sbjct: 674 RLWDVASGRELQVL-----------VGHTA--PVGSAAFSPDG----------QTVITAA 710

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              +  + D       ++    +  ++  +F+ + +          D     L D    R
Sbjct: 711 EDRTARLWDVASGRELHVLRGHEGPVWSAQFAADSK----TALTAGDDRTARLWDVDSGR 766

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
               +      + + +FS++G +  ++   D    +++V   +   + L        +A 
Sbjct: 767 ELHVLRGHAGPVWSAQFSADG-QFALTASDDGTARLWNV-ASARELQVLRGHQGAVWAAQ 824

Query: 309 YSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +S D  + V  S DR  +    +       +  + +  E S     +S  G  I      
Sbjct: 825 FSADGQRAVTASYDRTAR----LWDVASGRELHVLRGHEGSVRAARFSADGQFILTASRD 880

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSIDL 423
                I     D +  R L      + P W    S  G +++ +    GD  ++L+ +  
Sbjct: 881 KTA-RIW----DATHGRQLHVLRGHEGPVWGVQLSADGGTVLTAS---GDKTARLWEMTS 932

Query: 424 NGRNETLINTPAYASDPQWVG 444
                 L           W  
Sbjct: 933 GQEVRNLRGHEGAV----WSA 949



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 99/291 (34%), Gaps = 21/291 (7%)

Query: 157 TISDDIYQSITGEKG----DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
             +   +   T  +G     + ++     ++ ++    ++  + D        +      
Sbjct: 633 RAAGYAFPYSTVLRGHANKVWVAQFSADGKTAITASEDHTARLWDVASGRELQVLVGHTA 692

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +    FSP+ Q V  A  D        L D    R    +      + + +F+++ K  
Sbjct: 693 PVGSAAFSPDGQTVITAAEDR----TARLWDVASGRELHVLRGHEGPVWSAQFAADSKT- 747

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            ++   D    ++ VD        L        SA +S D  Q    +  +G  +L+   
Sbjct: 748 ALTAGDDRTARLWDVD-SGRELHVLRGHAGPVWSAQFSADG-QFALTASDDGTARLW--N 803

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
              + + ++ +  + + +   +S  G   A T        +  +        L   + ++
Sbjct: 804 VASARELQVLRGHQGAVWAAQFSADGQR-AVTASYDRTARLWDVASGRELHVLRGHEGSV 862

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           +A  +S  G+ ++ + +   D  ++++    +GR   ++        P W 
Sbjct: 863 RAARFSADGQFILTASR---DKTARIWDA-THGRQLHVLRGHEG---PVWG 906



 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/317 (12%), Positives = 104/317 (32%), Gaps = 42/317 (13%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLW+V   +++             ++ H     +  +     G          + V++  
Sbjct: 1010 RLWEVASGREL-------------RVLHGHEAPVVGAQFSADG----------QRVLTTS 1046

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  +  + D    +   +       +   +F+ +   V            V L +    R
Sbjct: 1047 LDETARLWDVVSGHELRVLRGHHGAVLSGQFTRDGMTV----LTTGKDQTVRLWEAASGR 1102

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              + +    + +++ + +++G   L +   D    ++ +       + L       ISA 
Sbjct: 1103 ELRTLKGHEAPVVSVQLAADGATLL-TASSDRTARLWEMS-SGRELQVLRGHEAPVISAE 1160

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +S D  + V  +  +   +L+   +       + +  E +     +SP G  +       
Sbjct: 1161 FSADGKR-VLTASWDATARLW--DATSGGALHVLRGHEEALRSARFSPDGRTVLTASLDE 1217

Query: 369  EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                  V    G +  +L   + ++++  +SP G+S++ +    GD  ++L+     G  
Sbjct: 1218 TARLWEV--ASGRELHVLRGHEDSVESAQFSPDGKSVLTAS---GDMTARLWDATSGGEL 1272

Query: 428  ETLINTPAYASDPQWVG 444
              L           W  
Sbjct: 1273 PVLRGHSGGV----WSA 1285



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 57/361 (15%), Positives = 118/361 (32%), Gaps = 46/361 (12%)

Query: 77   DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLV-TGRVIKEGKDRLRVEF----RLW 131
              F L + D    ++ N  S    Q     G Q  V   +   +G+  +   +    RLW
Sbjct: 787  GQFALTASDDGTARLWNVASARELQVLR--GHQGAVWAAQFSADGQRAVTASYDRTARLW 844

Query: 132  DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
            DV   +++   +      S R  A   S D         G F          +++     
Sbjct: 845  DVASGRELHVLR--GHEGSVR--AARFSAD---------GQF----------ILTASRDK 881

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  + D       ++    +  ++  + S +   V  A+ D        L +    +  +
Sbjct: 882  TARIWDATHGRQLHVLRGHEGPVWGVQLSADGGTVLTASGDK----TARLWEMTSGQEVR 937

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             +      + + +FS +GK  L +   D    ++           L         A +S 
Sbjct: 938  NLRGHEGAVWSAQFSGDGKTVL-TASGDHTARLWEASGN-RQLGVLLGHAGAVSLAQFSA 995

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            D   ++  SD +G  +L+  +     + R+    EA      +S  G  +  T       
Sbjct: 996  DGRTLLTASD-DGSARLW--EVASGRELRVLHGHEAPVVGAQFSADGQRVLTTSLDETAR 1052

Query: 372  AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
               V+   G + R+L      + +  ++  G +++       D   +L+    +GR    
Sbjct: 1053 LWDVVS--GHELRVLRGHHGAVLSGQFTRDGMTVL---TTGKDQTVRLWEA-ASGRELRT 1106

Query: 431  I 431
            +
Sbjct: 1107 L 1107



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 81/259 (31%), Gaps = 48/259 (18%)

Query: 76   SDVFNLISQDSFKQKITNPDSIPRFQDW---------NSLGAQV-LVTGRVIKEGKDRLR 125
            S  F    +D      T  D   R   W            G +  +V+ ++  +G   L 
Sbjct: 1074 SGQFT---RDGMTVLTTGKDQTVRL--WEAASGRELRTLKGHEAPVVSVQLAADGATLLT 1128

Query: 126  VE----FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                   RLW++   +++   +   +P     I+   S D                    
Sbjct: 1129 ASSDRTARLWEMSSGRELQVLRGHEAPV----ISAEFSAD-------------------G 1165

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V++     +  + D       ++    ++ L   RFSP+ + V  A+ D+       L
Sbjct: 1166 KRVLTASWDATARLWDATSGGALHVLRGHEEALRSARFSPDGRTVLTASLDE----TARL 1221

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +    R    +      + + +FS +GK  L +   D    ++           L    
Sbjct: 1222 WEVASGRELHVLRGHEDSVESAQFSPDGKSVL-TASGDMTARLWDA-TSGGELPVLRGHS 1279

Query: 302  FINISASYSPDSSQIVFES 320
                SA +S D    V  S
Sbjct: 1280 GGVWSAQFSADGKTAVTTS 1298


>gi|254421468|ref|ZP_05035186.1| hypothetical protein S7335_1618 [Synechococcus sp. PCC 7335]
 gi|196188957|gb|EDX83921.1| hypothetical protein S7335_1618 [Synechococcus sp. PCC 7335]
          Length = 1187

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 109/314 (34%), Gaps = 47/314 (14%)

Query: 109  QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            ++L TG   +          R+WDV   + +  K F     + R +              
Sbjct: 737  EMLATGSTDET--------VRMWDVHTGQCL--KTFTGHTHAVRSV-----------TFR 775

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              G          + +VSG    ++ + +                ++   +SP+   +  
Sbjct: 776  PNG----------QELVSGGGDQTIKIWNVQTGRCLKTLSGHRNWIWSIVYSPDGSLLV- 824

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                  +   V + + +     K +  + + I A  FS +G+  + S   D  + ++ ++
Sbjct: 825  ---SGGEDQTVRIWNIQTGHCLKSLTGYANAIRAITFSPDGQTLV-SGSDDYTVKLWDIE 880

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEA 347
             Q    + LT      +S +  PDS  I   S DR     + +     +   R       
Sbjct: 881  -QEQCLQTLTGHKNWILSVAVHPDSRLIASSSADRT----VKIWDIQRNRCVRTLPGHTN 935

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            + +   +SP    I  +        +  ++ DG +  +L   S +++  +SP GR+L+  
Sbjct: 936  TVWSVAFSPN-RQILASGGHDGSIHLWDIQ-DGHRLAILKHPSQVRSVAFSPDGRTLV-- 991

Query: 408  RKKDGDTGSKLYSI 421
                 D   +L+ +
Sbjct: 992  -SGSSDKQVRLWDV 1004



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 84/221 (38%), Gaps = 26/221 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               D  ++   FSP+ Q +A  + D      V + D         +    + + +  FS
Sbjct: 595 CRGHDAWIWSIAFSPDGQWLASGSADQ----TVKIWDVHTGCCMLTLKGHTNWVRSVVFS 650

Query: 267 SNGKRALISVQKDEAMDIYSVD----LQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            +  + + S   D+ + ++ V+    L++     L          S+SPD   I      
Sbjct: 651 PD-SKIVASGSSDQMVKLWDVERCCCLKT-----LKGHTNYVQGVSFSPDGQLIA---SA 701

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              +++ +      +  + + D + S++   +SP G+++A          + +      Q
Sbjct: 702 GWDQRVNIWDVESGECLQ-TVDDKNSFWSIAFSPDGEMLATGSTDET---VRMWDVHTGQ 757

Query: 383 --ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +        +++ T+ P+G+ L+      GD   K++++
Sbjct: 758 CLKTFTGHTHAVRSVTFRPNGQELV---SGGGDQTIKIWNV 795



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 83/219 (37%), Gaps = 20/219 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    FSP+ Q +A A +D     RV + D       + + + ++   +  F
Sbjct: 678 TLKGHTNYVQGVSFSPDGQLIASAGWDQ----RVNIWDVESGECLQTV-DDKNSFWSIAF 732

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREG 324
           S +G+    +   DE + ++  D+ +    +  T       S ++ P+  ++V      G
Sbjct: 733 SPDGEMLA-TGSTDETVRMW--DVHTGQCLKTFTGHTHAVRSVTFRPNGQELV---SGGG 786

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-E 383
            + + +         +         +  V+SP G L+      GE   + +         
Sbjct: 787 DQTIKIWNVQTGRCLKTLSGHRNWIWSIVYSPDGSLLV---SGGEDQTVRIWNIQTGHCL 843

Query: 384 RLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + L   +N ++A T+SP G++L+       D   KL+ I
Sbjct: 844 KSLTGYANAIRAITFSPDGQTLVSGSD---DYTVKLWDI 879



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 62/188 (32%), Gaps = 27/188 (14%)

Query: 115  RVIKEGKDRLRV------EFRLWDVKDRK---QIIGKKFFSSPASWRKIAHTISDDIYQS 165
             V      R  V      + RLWDV+  +    + G        ++R  + T+      S
Sbjct: 980  SVAFSPDGRTLVSGSSDKQVRLWDVESGQCLRVMSGHSGMVWTVAYR--SKTVDSKTVNS 1037

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
             T               ++ S     +L +      +           ++   FSP    
Sbjct: 1038 KTDGSD---------EPTIASASSDKTLRLWHAQSGDCLRTLEGHTNWIWSIAFSPQGNL 1088

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +A  + D      V L D    R  K +    +++ +  FS  G     SV +DE + ++
Sbjct: 1089 LASGSADK----TVKLWDVDNGRCLKTLLGHGNVVRSLAFSPKGDYLA-SVSEDETIKLW 1143

Query: 286  SVDLQSNA 293
              D+++  
Sbjct: 1144 --DVKTGN 1149



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 95/288 (32%), Gaps = 50/288 (17%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRK---QIIG-----KKFFSSPASWRKIAHTISDDIYQ- 164
            G+ +  G D   V  +LWD++  +    + G           P S R IA + +D   + 
Sbjct: 862  GQTLVSGSDDYTV--KLWDIEQEQCLQTLTGHKNWILSVAVHPDS-RLIASSSADRTVKI 918

Query: 165  ------SITGEKGDFNSRILFVSESV-----VSGIIKNSLCVMD-RDGANIRYLTPSRDQ 212
                            + +  V+ S       SG    S+ + D +DG  +  L      
Sbjct: 919  WDIQRNRCVRTLPGHTNTVWSVAFSPNRQILASGGHDGSIHLWDIQDGHRLAILKHPSQV 978

Query: 213  ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS---NG 269
                  FSP+ + +   + D     +V L D    +  + +     M+    + S   + 
Sbjct: 979  RSV--AFSPDGRTLVSGSSDK----QVRLWDVESGQCLRVMSGHSGMVWTVAYRSKTVDS 1032

Query: 270  KRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN------------ISASYSPDSSQIV 317
            K   ++ + D + +       S+ T RL +    +             S ++SP  + + 
Sbjct: 1033 KT--VNSKTDGSDEPTIASASSDKTLRLWHAQSGDCLRTLEGHTNWIWSIAFSPQGNLLA 1090

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              S     + + +   +     +             +SP+GD +A   
Sbjct: 1091 SGS---ADKTVKLWDVDNGRCLKTLLGHGNVVRSLAFSPKGDYLASVS 1135


>gi|134079415|emb|CAK40796.1| unnamed protein product [Aspergillus niger]
          Length = 1163

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 94/265 (35%), Gaps = 29/265 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D +   ++         +    FSP+   +A  + D      V L DT 
Sbjct: 558 SGSEDQTVLLWDPESGILQQTLEGHSASVQSVAFSPDGHLLASGSEDQ----TVRLWDTA 613

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + +    + + +  FS +G     S  +D    ++  D  +   +R+      ++
Sbjct: 614 TGMLQQTLEGHSASVQSVAFSPDGHLLA-SGSRDRTARLW--DPVTGILQRILKGHSESV 670

Query: 306 -SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPDS  +   S+    + + +        ++   +  +S     +S  G L+A  
Sbjct: 671 QSVAFSPDSHILASGSE---DQSVQLWNPVTGILQKSLAEDSSSILSVTFSSDGYLLA-- 725

Query: 365 KFSGEKFAIGVMKKDGSQERLLVED---------SNLQAPTWSPSGRSLIFSRKKDGDTG 415
               + + + V        +  V+              A  ++P G++L        D  
Sbjct: 726 -SGSDDWYVYVWDLATGTLQQTVDGHMSSGFRGSGASDAVAFTPDGKTLA---SCSADET 781

Query: 416 SKLYSIDLNGRNETLINTPAYASDP 440
            +L+  DL     T  N  + + +P
Sbjct: 782 IRLW--DLTASEVTQ-NHNSDSFEP 803



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 48/290 (16%), Positives = 98/290 (33%), Gaps = 49/290 (16%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWD      ++ +      AS + +A   S D                      + SG 
Sbjct: 608 RLWDTATG--MLQQTLEGHSASVQSVA--FSPD-------------------GHLLASGS 644

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              +  + D     ++ +     + +    FSP+   +A  + D      V L +     
Sbjct: 645 RDRTARLWDPVTGILQRILKGHSESVQSVAFSPDSHILASGSEDQ----SVQLWNPVTGI 700

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-------- 300
             K +    S IL+  FSS+G          +   +Y  DL +   ++  +         
Sbjct: 701 LQKSLAEDSSSILSVTFSSDGYLLA---SGSDDWYVYVWDLATGTLQQTVDGHMSSGFRG 757

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-----VWS 355
              + + +++PD   +   S     E + +     S+   ++Q+  +  F+P      +S
Sbjct: 758 SGASDAVAFTPDGKTLASCS---ADETIRLWDLTASE---VTQNHNSDSFEPPPQIMTFS 811

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           P G  +A   +      I  + +      L    + + +  +SP  R L+
Sbjct: 812 PDGLFLASGSYESPVVRIWNVTEGTIAWTLDEHSAAINSLAFSPDNRILV 861



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 78/230 (33%), Gaps = 21/230 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    FSP+   +A  + D      V L D       + +    + + +  
Sbjct: 535 QTLEGHSDSVQSVAFSPDGHLLASGSEDQ----TVLLWDPESGILQQTLEGHSASVQSVA 590

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G     S  +D+ + ++  D  +   ++ L        S ++SPD   +   S R+
Sbjct: 591 FSPDGHLLA-SGSEDQTVRLW--DTATGMLQQTLEGHSASVQSVAFSPDGHLLASGS-RD 646

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +L+         +RI +    S     +SP   ++A      E  ++ +        
Sbjct: 647 RTARLW--DPVTGILQRILKGHSESVQSVAFSPDSHILA---SGSEDQSVQLWNPVTGIL 701

Query: 384 R--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +  L  + S++ + T+S  G  L       G     +Y  DL        
Sbjct: 702 QKSLAEDSSSILSVTFSSDGYLLA-----SGSDDWYVYVWDLATGTLQQT 746



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 74/200 (37%), Gaps = 20/200 (10%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRV---YLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            I+F PR     + + +  + +E    +    ++    D   + +      + +  FS +
Sbjct: 498 GIIFVPR-----KTIIHTEFANEVPTWICQFPIVKDNWDAELQTLEGHSDSVQSVAFSPD 552

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           G     S  +D+ + ++  D +S   ++ L        S ++SPD   +   S+    + 
Sbjct: 553 GHLLA-SGSEDQTVLLW--DPESGILQQTLEGHSASVQSVAFSPDGHLLASGSE---DQT 606

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +  +     ++  +   AS     +SP G L+A            +        + ++
Sbjct: 607 VRLWDTATGMLQQTLEGHSASVQSVAFSPDGHLLASGSRDRTA---RLWDPVTGILQRIL 663

Query: 388 EDS--NLQAPTWSPSGRSLI 405
           +    ++Q+  +SP    L 
Sbjct: 664 KGHSESVQSVAFSPDSHILA 683



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 60/346 (17%), Positives = 100/346 (28%), Gaps = 63/346 (18%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIA-----HTIS----DDIYQSITGEKGDF------ 173
           RLWD      I+ +       S + +A     H ++    D   Q      G        
Sbjct: 650 RLWDPVTG--ILQRILKGHSESVQSVAFSPDSHILASGSEDQSVQLWNPVTGILQKSLAE 707

Query: 174 -NSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-------RFS 220
            +S IL V+ S       SG     + V D     ++          F          F+
Sbjct: 708 DSSSILSVTFSSDGYLLASGSDDWYVYVWDLATGTLQQTVDGHMSSGFRGSGASDAVAFT 767

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----RFSSNGKRALIS 275
           P+ + +A  + D+     + L D       +   N  S    P      FS +G      
Sbjct: 768 PDGKTLASCSADE----TIRLWDLTASEVTQ---NHNSDSFEPPPQIMTFSPDGLFLASG 820

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +   + I++V  +      L        S ++SPD+  +V  S         +     
Sbjct: 821 SYESPVVRIWNV-TEGTIAWTLDEHSAAINSLAFSPDNRILVTCS---ADNSACLWDLTT 876

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED------ 389
                       S     +SP G L+A          + +        +  +        
Sbjct: 877 RTLLHTIDSHSESVNSVAFSPNGQLLASCSDDDT---VCIWDFATYTLQQTLTACPHLGD 933

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
                ++ T+SP G+ L       G     L   DL  G     IN
Sbjct: 934 SIGGYKSVTFSPDGKLLA-----SGTYSGLLCVWDLATGAIYRTIN 974



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 56/184 (30%), Gaps = 17/184 (9%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            + + +     I +        +    FSP+ + +   + D+       L D         
Sbjct: 827  VRIWNVTEGTIAWTLDEHSAAINSLAFSPDNRILVTCSADNSAC----LWDLTTRTLLHT 882

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-------LTNTLFINI 305
            I +    + +  FS NG+    S   D+ + I+  D  +   ++       L +++    
Sbjct: 883  IDSHSESVNSVAFSPNGQLLA-SCSDDDTVCIW--DFATYTLQQTLTACPHLGDSIGGYK 939

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S ++SPD   +           L V         R       +     + P   L+A   
Sbjct: 940  SVTFSPDGKLLA---SGTYSGLLCVWDLATGAIYRTINAHLDTIEYLAFDPDSQLLASCS 996

Query: 366  FSGE 369
                
Sbjct: 997  SDDT 1000



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 67/199 (33%), Gaps = 25/199 (12%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               NS C+ D     + +   S  + +    FSPN Q +A  + D  D + ++   T   
Sbjct: 864  SADNSACLWDLTTRTLLHTIDSHSESVNSVAFSPNGQLLASCSDD--DTVCIWDFATYTL 921

Query: 248  RAP----KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            +        +G+      +  FS +GK          +  +   DL + A  R T    +
Sbjct: 922  QQTLTACPHLGDSIGGYKSVTFSPDGKLLA---SGTYSGLLCVWDLATGAIYR-TINAHL 977

Query: 304  NI--SASYSPDSSQIVFESDREGKE----------QLYVMQSNGSDQKRISQDKEASYFD 351
            +     ++ PDS  +   S  +             Q++ ++ +G             +F 
Sbjct: 978  DTIEYLAFDPDSQLLASCSSDDTMRLWALEEYALVQIWDIEWDGDSCG---FSHYFEFFH 1034

Query: 352  PVWSPQGDLIAFTKFSGEK 370
               S  G+  AF    G  
Sbjct: 1035 DDLSIHGNSAAFVVERGSD 1053


>gi|116180278|ref|XP_001219988.1| hypothetical protein CHGG_00767 [Chaetomium globosum CBS 148.51]
 gi|88185064|gb|EAQ92532.1| hypothetical protein CHGG_00767 [Chaetomium globosum CBS 148.51]
          Length = 302

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 81/222 (36%), Gaps = 14/222 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D                +F   +SP+  ++A  + D      + + +  
Sbjct: 53  SASADGTVKIWDPATHQCSATLEGHGGSVFSVVWSPDGTQLASGSADR----TIKIWNPA 108

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +    + +    +L+  +S +G +   S  +D  ++I+  DL +     L     + +
Sbjct: 109 TGQCTATLESHAGSVLSVAWSPDGTQLA-SASRDGPIEIW--DLATAQMI-LEAFRELVL 164

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++SPD  +  F S  +    + +     ++   + +    S     WSP G  +A   
Sbjct: 165 SVAWSPDGYK--FASGPD-DTIIKIWGWACTNSLTL-EGHTRSVGSVAWSPDGARLASGS 220

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
                    +   D  Q    +   +  +Q+ TWSP+G  L 
Sbjct: 221 DDRTVKVWDLWDLDHGQCTATLSGHDKFVQSVTWSPNGARLA 262



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 68/206 (33%), Gaps = 9/206 (4%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V + D    +    +      + +  +S +G +   S   D  + I++       T  L 
Sbjct: 60  VKIWDPATHQCSATLEGHGGSVFSVVWSPDGTQLA-SGSADRTIKIWN-PATGQCTATLE 117

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +     +S ++SPD +Q+   S R+G  +++    + +  + I +          WSP G
Sbjct: 118 SHAGSVLSVAWSPDGTQLASAS-RDGPIEIW----DLATAQMILEAFRELVLSVAWSPDG 172

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              A +        I       +   L     ++ +  WSP G  L             L
Sbjct: 173 YKFA-SGPDDTIIKIWGW-ACTNSLTLEGHTRSVGSVAWSPDGARLASGSDDRTVKVWDL 230

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           + +D      TL     +     W  
Sbjct: 231 WDLDHGQCTATLSGHDKFVQSVTWSP 256


>gi|291565851|dbj|BAI88123.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 952

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 107/319 (33%), Gaps = 34/319 (10%)

Query: 123 RLRVEFRLWDVKDRKQIIGKK--------FFSSPASWRKIAHTISDDIYQSITGEKG--- 171
            +    +LWD++  +++               +P   R ++ ++ D   +    E+G   
Sbjct: 174 SVDATLKLWDLEQGRELATLSGHSREVLAVAIAPDGKRAVSASV-DATLKLWDLEQGREL 232

Query: 172 ---DFNSRILFVSESVVSGII------KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
                +SR +        G         N+L + D D              ++    +P+
Sbjct: 233 ATLSGHSREVLAVAIAPDGKRAVSASGDNTLKLWDLDQGRELATLSGHSDSVWAVAIAPD 292

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            ++   A+ D      + L D    R    +      + A   + +GKRA+ S   DE +
Sbjct: 293 GKRAVSASDDA----TLKLWDLEQGRELATLSGHSGGVRAVAIAPDGKRAV-SASSDETL 347

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++ ++ Q      L+       + + +PD  + V  S   G + L +       +    
Sbjct: 348 KLWDLE-QGRELATLSGHSSSVRAVAIAPDGKRAVSAS---GDKTLKLWDLEQGRELATL 403

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    +P G   A +  + +   +  +++      L      + A   +P G+
Sbjct: 404 SGHSDWVYAVAIAPDGKR-AVSASNDKTLKLWDLEQGRELATLSGHSHWVLAVAIAPDGK 462

Query: 403 SLIFSRKKDGDTGSKLYSI 421
               +    GD   KL+ +
Sbjct: 463 R---AVSASGDKTLKLWDL 478



 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 50/325 (15%), Positives = 109/325 (33%), Gaps = 43/325 (13%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            V   G   L+    LWD++  +++                H  SD +Y       G   
Sbjct: 380 AVSASGDKTLK----LWDLEQGRELATLS-----------GH--SDWVYAVAIAPDG--- 419

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                  +  VS     +L + D +              +     +P+ ++   A+ D  
Sbjct: 420 -------KRAVSASNDKTLKLWDLEQGRELATLSGHSHWVLAVAIAPDGKRAVSASGDK- 471

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               + L D    R    +      +LA   + +GKR  +S   D+ + ++ ++ Q    
Sbjct: 472 ---TLKLWDLEQGRELATLSGHSHWVLAVAIAPDGKR-AVSASGDKTLKLWDLE-QGREL 526

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             L+       + + +PD  + V  S     E L +       +         S +    
Sbjct: 527 ATLSGHSSEVRAVAIAPDGKRAVSAS---WDETLKLWDLEQGRELATLSGHSDSVWAVAI 583

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           +P G  +A +    +   +  +++      L    S ++A   +P G+  + + +   D 
Sbjct: 584 APDGK-LAVSASEDKTLKLWDLEQGRELATLSGHSSEVRAVAIAPDGKRAVSASR---DN 639

Query: 415 GSKLYSIDLNGRNETLINTPAYASD 439
             KL+ ++   +   L     ++S+
Sbjct: 640 TLKLWDLE---QGRELATLSGHSSE 661



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 95/285 (33%), Gaps = 40/285 (14%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            V   G   L+    LWD++  +++         +  R +A  I+ D             
Sbjct: 506 AVSASGDKTLK----LWDLEQGRELA--TLSGHSSEVRAVA--IAPD------------- 544

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                  +  VS     +L + D +              ++    +P+ +    A+ D  
Sbjct: 545 ------GKRAVSASWDETLKLWDLEQGRELATLSGHSDSVWAVAIAPDGKLAVSASEDK- 597

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               + L D    R    +    S + A   + +GKR  +S  +D  + ++ ++ Q    
Sbjct: 598 ---TLKLWDLEQGRELATLSGHSSEVRAVAIAPDGKR-AVSASRDNTLKLWDLE-QGREL 652

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             L+       + + +PD  + V  S     E L +      +    +   + +      
Sbjct: 653 ATLSGHSSEVRAVAIAPDGKRAVSAS---WDETLKLWDLVTGEV-LATFIGDGAMLSCEV 708

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           +P G  +      G    +  ++ +G     L  D+ L +P+ +P
Sbjct: 709 APDGVTVVAGDNGG---RVHFLRLEGVDFLPLEMDAPLTSPSENP 750



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 58/192 (30%), Gaps = 9/192 (4%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + +      + A   + +GKR  +S   D  + ++ ++ Q      L+      ++
Sbjct: 145 GPLIRTLSGHSGGVRAVAIAPDGKR-AVSASVDATLKLWDLE-QGRELATLSGHSREVLA 202

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + +PD  + V  S       L +       +                +P G   A +  
Sbjct: 203 VAIAPDGKRAVSASV---DATLKLWDLEQGRELATLSGHSREVLAVAIAPDGKR-AVSAS 258

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +  + +      L     ++ A   +P G+  + +     D   KL+ ++    
Sbjct: 259 GDNTLKLWDLDQGRELATLSGHSDSVWAVAIAPDGKRAVSASD---DATLKLWDLEQGRE 315

Query: 427 NETLINTPAYAS 438
             TL        
Sbjct: 316 LATLSGHSGGVR 327


>gi|126659692|ref|ZP_01730821.1| WD40-like beta propeller repeat protein [Cyanothece sp. CCY0110]
 gi|126619037|gb|EAZ89777.1| WD40-like beta propeller repeat protein [Cyanothece sp. CCY0110]
          Length = 188

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 8/143 (5%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           NT        +S +   +VF SDR+GK  +++          +            P  S 
Sbjct: 44  NTRSSEQHPRFSYEGRYLVFASDRQGKRSIWLYDQINGRLLPLPGLNQPGTIQDQPDISA 103

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  I +      K  I V  +  S+   + ++    ++ PT S +GR + F   + G  
Sbjct: 104 DGRYIVYVSEQEGKQDIFVYDRQTSRADNITKNILGEVRHPTISGNGRLIAFESNRSGQW 163

Query: 415 GSKLYSIDLNGRNETLINTPAYA 437
              +Y   LN    T ++ P+ +
Sbjct: 164 DIIIYDRGLN----TPLSLPSQS 182



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 3/143 (2%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLF-INISASYSP 311
           N RS    PRFS  G+  + +  +     I+  D  +     L   N    I      S 
Sbjct: 44  NTRSSEQHPRFSYEGRYLVFASDRQGKRSIWLYDQINGRLLPLPGLNQPGTIQDQPDISA 103

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   IV+ S++EGK+ ++V     S    I+++       P  S  G LIAF      ++
Sbjct: 104 DGRYIVYVSEQEGKQDIFVYDRQTSRADNITKNILGEVRHPTISGNGRLIAFESNRSGQW 163

Query: 372 AIGVMKKDGSQERLLVEDSNLQA 394
            I +  +  +    L   S++ +
Sbjct: 164 DIIIYDRGLNTPLSLPSQSDIGS 186



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 2/119 (1%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALI 274
            PRFS   + + +A+                   P    N    I   P  S++G+  + 
Sbjct: 51  HPRFSYEGRYLVFASDRQGKRSIWLYDQINGRLLPLPGLNQPGTIQDQPDISADGRYIVY 110

Query: 275 SVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +++   DI+  D Q++  + +T N L      + S +   I FES+R G+  + +  
Sbjct: 111 VSEQEGKQDIFVYDRQTSRADNITKNILGEVRHPTISGNGRLIAFESNRSGQWDIIIYD 169



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 195 VMDRDGANIRYL----TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           +   D  N R L          I  +P  S + + + Y +  +     +++ D +  RA 
Sbjct: 73  IWLYDQINGRLLPLPGLNQPGTIQDQPDISADGRYIVYVSEQEGK-QDIFVYDRQTSRAD 131

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
               N    +  P  S NG+       +    DI   D
Sbjct: 132 NITKNILGEVRHPTISGNGRLIAFESNRSGQWDIIIYD 169



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 8/106 (7%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------AP 395
           S +  +S   P +S +G  + F      K +I +  +     RLL      Q       P
Sbjct: 42  SLNTRSSEQHPRFSYEGRYLVFASDRQGKRSIWLYDQING--RLLPLPGLNQPGTIQDQP 99

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             S  GR +++  +++G     +Y    +  +    N       P 
Sbjct: 100 DISADGRYIVYVSEQEGKQDIFVYDRQTSRADNITKNILGEVRHPT 145


>gi|119512021|ref|ZP_01631116.1| hypothetical protein N9414_03358 [Nodularia spumigena CCY9414]
 gi|119463311|gb|EAW44253.1| hypothetical protein N9414_03358 [Nodularia spumigena CCY9414]
          Length = 517

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/334 (15%), Positives = 112/334 (33%), Gaps = 52/334 (15%)

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTG------RVIKEGKDRLRVE------FRLWDVKD 135
            +KI N +SI     W +      +TG       V      R           +LW+++ 
Sbjct: 206 IEKIPNLESIAAVVPWANPTLLATLTGHSDLVESVAISPDGRTLASGSWDNTIKLWNLQT 265

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS--ESVVSGIIKNSL 193
           ++QI                         ++TG    F + + F     ++ SG    ++
Sbjct: 266 QQQIA------------------------TLTGHSDYFVNSVAFSPDGRTLASGSWDKTI 301

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            + +              + +    FSP+ + +A  ++D      + L + +  +    +
Sbjct: 302 KLWNLQTQQEVATLTGHSEGVNSVAFSPDGRTLASGSWDK----TIKLWNLQTQQEVATL 357

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                 + +  FS +G+    S   D+ + ++++  Q        ++  +N S ++SPDS
Sbjct: 358 TGHSEGVNSVAFSLDGRTLA-SGSWDKTIKLWNLQTQQQIATFTGHSEGVN-SVAFSPDS 415

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +   S     + + +       Q               +SP G  +A   +      I
Sbjct: 416 RTLASGS---WDKTIKLWNLQTQQQIVTFTGHSGGVNSVAFSPDGRTLASGSWDKT---I 469

Query: 374 GVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
            +      QE   L      + +  +SP GR+L 
Sbjct: 470 KLWNLQTQQEVATLTGHSEAVNSVAFSPDGRTLA 503



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/105 (13%), Positives = 39/105 (37%), Gaps = 5/105 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S ++ SG    ++ + +                +    FSP+ + +A  ++D      + 
Sbjct: 415 SRTLASGSWDKTIKLWNLQTQQQIVTFTGHSGGVNSVAFSPDGRTLASGSWDK----TIK 470

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           L + +  +    +      + +  FS +G+    S   D+ + ++
Sbjct: 471 LWNLQTQQEVATLTGHSEAVNSVAFSPDGRTLA-SGSTDKTIKLW 514


>gi|307591415|ref|YP_003900214.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306986269|gb|ADN18148.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 1246

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 52/319 (16%), Positives = 106/319 (33%), Gaps = 46/319 (14%)

Query: 113  TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
             G V      +L          ++W V+  K +   K            H   D ++Q  
Sbjct: 751  VGGVTFSPNGQLLASGSADKTIKIWLVETGKCLHTLK-----------GHQ--DWVWQVA 797

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                G           +  SG     +  +  +           +  ++   FSP+ Q +
Sbjct: 798  FSSDGQ--------LLASGSGDKTIKIWSIIEEKYQNIDTLKGHENWIWSIAFSPDGQYI 849

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            A  + D      + L   +     +    + + + +  FS + +  L S   D ++ ++S
Sbjct: 850  ASGSED----FTLRLWSVKTRECLQCFRGYGNRLSSIAFSPDSQYIL-SGSIDRSIRLWS 904

Query: 287  VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            +        ++        S ++SPD   +V  S   G + + +      +  +I Q+K+
Sbjct: 905  I-KNHKCLRQINGHTDWICSVAFSPDGKTLVSGS---GDQTIRLWSVESGEVIKILQEKD 960

Query: 347  AS--YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGR 402
                 +    SP   LIA T        I +      ++          + A  +SP+ +
Sbjct: 961  DWVLLYQVAVSPNAQLIASTSHDNT---IKLWDLKTGEKYTFAPEHQKRVWALAFSPNSQ 1017

Query: 403  SLIFSRKKDGDTGSKLYSI 421
             L+      GD   KL+S+
Sbjct: 1018 MLV---SGSGDNSVKLWSV 1033



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 82/242 (33%), Gaps = 23/242 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ +   D     +      + +    FSPN Q +A  + D      + +    
Sbjct: 723 TGSEDKTIKIWSVDTGECLHTLEGHQERVGGVTFSPNGQLLASGSADK----TIKIWLVE 778

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV------DLQSNATERLTN 299
             +    +   +  +    FSS+G+    S   D+ + I+S+      ++ +     L  
Sbjct: 779 TGKCLHTLKGHQDWVWQVAFSSDGQLLA-SGSGDKTIKIWSIIEEKYQNIDT-----LKG 832

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S ++SPD   I   S+      L +      +  +  +          +SP   
Sbjct: 833 HENWIWSIAFSPDGQYIASGSE---DFTLRLWSVKTRECLQCFRGYGNRLSSIAFSPDSQ 889

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            I           +  +K      ++      + +  +SP G++L+      GD   +L+
Sbjct: 890 YILSGSID-RSIRLWSIKNHKCLRQINGHTDWICSVAFSPDGKTLV---SGSGDQTIRLW 945

Query: 420 SI 421
           S+
Sbjct: 946 SV 947



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 59/330 (17%), Positives = 122/330 (36%), Gaps = 53/330 (16%)

Query: 108  AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI-AHTISDDIYQSI 166
            +Q +++G + +          RLW +K+ K +            R+I  HT  D I    
Sbjct: 888  SQYILSGSIDR--------SIRLWSIKNHKCL------------RQINGHT--DWICSVA 925

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQK 225
                G         +    SG     L  ++  G  I+ L    D +L      SPN Q 
Sbjct: 926  FSPDGK--------TLVSGSGDQTIRLWSVES-GEVIKILQEKDDWVLLYQVAVSPNAQL 976

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +A  ++D+     + L D +           +  + A  FS N  + L+S   D ++ ++
Sbjct: 977  IASTSHDN----TIKLWDLKTGEKYTFAPEHQKRVWALAFSPN-SQMLVSGSGDNSVKLW 1031

Query: 286  SVD----LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            SV     L++    +        +S ++SPD + I      +   +L+ ++ + +   + 
Sbjct: 1032 SVPRRFCLKTFQEHQ-----AWVLSVAFSPDGTLIA-TGSEDRTIKLWSIEDDLTQSLQT 1085

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
             +  +   +   +SP G L+A +    +   +  ++            S + +  +SP G
Sbjct: 1086 FKGHQGRIWSVAFSPDGQLLA-SSSDDQTVKLWKVEDGTLINSFEGHKSWVWSVDFSPEG 1144

Query: 402  RSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            + L        D    ++ ++  G+   L 
Sbjct: 1145 KLLA---SGGDDATILIWDVE-TGQRRQLP 1170



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 71/239 (29%), Gaps = 42/239 (17%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES---- 183
             +LWD+K      G+K+  +P   +++         Q +    GD + ++  V       
Sbjct: 986  IKLWDLKT-----GEKYTFAPEHQKRVWALAFSPNSQMLVSGSGDNSVKLWSVPRRFCLK 1040

Query: 184  ----------------------VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
                                    S      L  ++ D              ++   FSP
Sbjct: 1041 TFQEHQAWVLSVAFSPDGTLIATGSEDRTIKLWSIEDDLTQSLQTFKGHQGRIWSVAFSP 1100

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + Q +A ++ D      V L               +S + +  FS  GK         + 
Sbjct: 1101 DGQLLASSSDDQ----TVKLWKVEDGTLINSFEGHKSWVWSVDFSPEGKLLA---SGGDD 1153

Query: 282  MDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              I   D+++    +L         S  +SP+   +   S+    E + +      + +
Sbjct: 1154 ATILIWDVETGQRRQLPCEHTKSVRSVCFSPNGQTLASASE---DETIKLWNVKTGECQ 1209


>gi|307152434|ref|YP_003887818.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306982662|gb|ADN14543.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 964

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 82/213 (38%), Gaps = 22/213 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSM 259
              R+L  S D ++    FS + Q +   + D      V+L + R  +A ++ +   + M
Sbjct: 604 ERQRFLPDSTDSMILSVAFSRDGQTIVGGSRDG----SVWLWNVRTGKANRKPLTGHKDM 659

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIV 317
           + +  FS +G+  + S   D  + ++  D ++     + LT    +  S ++SPD   IV
Sbjct: 660 VTSVAFSPDGQTIV-SGSYDHTVRLW--DAKTGLPKGKPLTGHADVVTSVAFSPDGQTIV 716

Query: 318 FESDREGKEQ-LYVMQSNGSDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                 G +  + +  +     K       A       +SP G  I      G    + +
Sbjct: 717 ----SGGYDHTVRLWDAKTGLPKGKPLTGHADVVTSVAFSPDGQTIV---SGGYDHTVRL 769

Query: 376 MKKDGS--QERLLVEDSN-LQAPTWSPSGRSLI 405
                   + + L   ++ + +  +S  G +++
Sbjct: 770 WDAKTGLPKGKPLTGHADVVTSVAFSRDGETIV 802



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 54/368 (14%), Positives = 126/368 (34%), Gaps = 53/368 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGA------ 108
           F++   +  +++ + + DL RS    +   D      +  ++     +W           
Sbjct: 557 FLTSQPVEAEINAIAAWDLSRSAFARVSDNDRLAADNSLLNAQRN--NWERQRFLPDSTD 614

Query: 109 QVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
            ++++    ++G             LW+V+  K                  H   D +  
Sbjct: 615 SMILSVAFSRDGQTIVGGSRDGSVWLWNVRTGK----------ANRKPLTGHK--DMVTS 662

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQ 223
                 G          +++VSG   +++ + D   G            ++    FSP+ 
Sbjct: 663 VAFSPDG----------QTIVSGSYDHTVRLWDAKTGLPKGKPLTGHADVVTSVAFSPDG 712

Query: 224 QKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           Q +    YD      V L D +      K +     ++ +  FS +G+  + S   D  +
Sbjct: 713 QTIVSGGYDH----TVRLWDAKTGLPKGKPLTGHADVVTSVAFSPDGQTIV-SGGYDHTV 767

Query: 283 DIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            ++  D ++   +   LT    +  S ++S D   IV  S+ +   +L+  ++     K 
Sbjct: 768 RLW--DAKTGLPKGKPLTGHADVVTSVAFSRDGETIVSGSE-DTTVRLWDAKTGLPKGKP 824

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTW 397
           ++   +A      +S  G+ I           + +        +   L+   + + +  +
Sbjct: 825 LTGHTDA-VTSVAFSRDGETIVSGSEDTT---VRLWNAQTGIPQGNPLIGHWNRVNSVAF 880

Query: 398 SPSGRSLI 405
           SP G +++
Sbjct: 881 SPDGETIV 888



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 103/307 (33%), Gaps = 45/307 (14%)

Query: 109 QVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
            ++ +     +G            RLWD K             P       H  +D +  
Sbjct: 658 DMVTSVAFSPDGQTIVSGSYDHTVRLWDAKTG----------LPKGKPLTGH--ADVVTS 705

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQ 223
                 G          +++VSG   +++ + D   G            ++    FSP+ 
Sbjct: 706 VAFSPDG----------QTIVSGGYDHTVRLWDAKTGLPKGKPLTGHADVVTSVAFSPDG 755

Query: 224 QKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           Q +    YD      V L D +      K +     ++ +  FS +G+  + S  +D  +
Sbjct: 756 QTIVSGGYDH----TVRLWDAKTGLPKGKPLTGHADVVTSVAFSRDGETIV-SGSEDTTV 810

Query: 283 DIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            ++  D ++   +   LT       S ++S D   IV  S+      + +  +     + 
Sbjct: 811 RLW--DAKTGLPKGKPLTGHTDAVTSVAFSRDGETIVSGSE---DTTVRLWNAQTGIPQG 865

Query: 341 ISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWS 398
                  +  +   +SP G+ I           + +       ++ L+   + +Q+  +S
Sbjct: 866 NPLIGHWNRVNSVAFSPDGETIVSGSHDNT---VRLWDAQTRLKKPLIGHRDLVQSVAFS 922

Query: 399 PSGRSLI 405
             G++++
Sbjct: 923 RDGKTIV 929



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 81/242 (33%), Gaps = 36/242 (14%)

Query: 108 AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
           A V+ +     +G            RLWD K             P       H  +D + 
Sbjct: 743 ADVVTSVAFSPDGQTIVSGGYDHTVRLWDAKTG----------LPKGKPLTGH--ADVVT 790

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPN 222
                  G          E++VSG    ++ + D   G             +    FS +
Sbjct: 791 SVAFSRDG----------ETIVSGSEDTTVRLWDAKTGLPKGKPLTGHTDAVTSVAFSRD 840

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +   + D    +R++   T I +    IG++  +  +  FS +G+  + S   D  +
Sbjct: 841 GETIVSGSEDT--TVRLWNAQTGIPQGNPLIGHWNRVN-SVAFSPDGETIV-SGSHDNTV 896

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++  D Q+   + L     +  S ++S D   IV  S       + +  +     KR +
Sbjct: 897 RLW--DAQTRLKKPLIGHRDLVQSVAFSRDGKTIVSGS---WDNTVRLWDAKTGVSKRKT 951

Query: 343 QD 344
            D
Sbjct: 952 VD 953


>gi|288918092|ref|ZP_06412449.1| WD-40 repeat protein [Frankia sp. EUN1f]
 gi|288350474|gb|EFC84694.1| WD-40 repeat protein [Frankia sp. EUN1f]
          Length = 781

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 78/233 (33%), Gaps = 18/233 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G     L+  R   L    FSP+ + +A  +YD        + +   ++    +   +  
Sbjct: 527 GRAAGQLSGRRISGLHGCAFSPDGRLLATTSYDK----TARIWEIATEKQTLALNGHKGP 582

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +    FS +G+    +V  D  + ++ V   +     L        S ++SPD   +V  
Sbjct: 583 VYGCAFSPDGRLLA-TVSTDRTVRLWGVSTGTCIAT-LAGHRGSVYSCAFSPDGRLLV-- 638

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               G +Q  +      +                +SP G L+A T   G +    +    
Sbjct: 639 --SAGADQTLLWDVTNGETVHHLDGHTNYANGCSFSPDGLLLAATSNDGTR----LTDTP 692

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                 L    + Q+  +SP G  L  +   D    +KL+ +       TL  
Sbjct: 693 TGSTT-LTLPGSAQSCAFSPDGLLLATASTDD---TAKLWDVATGTAVATLTG 741



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 75/239 (31%), Gaps = 18/239 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     +  + +                ++   FSP+ + +A  + D      V L    
Sbjct: 555 TTSYDKTARIWEIATEKQTLALNGHKGPVYGCAFSPDGRLLATVSTDR----TVRLWGVS 610

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +   R  + +  FS +G R L+S   D+ +     + ++     L        
Sbjct: 611 TGTCIATLAGHRGSVYSCAFSPDG-RLLVSAGADQTLLWDVTNGET--VHHLDGHTNYAN 667

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             S+SPD   +   S     +   +  +        +     S     +SP G L+A   
Sbjct: 668 GCSFSPDGLLLAATS----NDGTRLTDTPTGST---TLTLPGSAQSCAFSPDGLLLATAS 720

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  +  +    +   L    S + A T++P G  L  +     D  ++L+ I   
Sbjct: 721 TDDTA-KLWDVATGTAVATLTGHTSTVMACTFAPFGLVLATTST---DKTARLWDISYT 775



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 11/86 (12%)

Query: 340 RIS-QDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDG--SQERLLVEDSNLQAP 395
           R++    E       +SP G L+A T   G + +  G  +  G  S  R+    S L   
Sbjct: 489 RLTLSGHERDVTCAAFSPDGQLLATTSKDGARLWDAGTGRAAGQLSGRRI----SGLHGC 544

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +SP GR L  +     D  ++++ I
Sbjct: 545 AFSPDGRLLATTSY---DKTARIWEI 567


>gi|119775549|ref|YP_928289.1| protease [Shewanella amazonensis SB2B]
 gi|119768049|gb|ABM00620.1| protease, putative [Shewanella amazonensis SB2B]
          Length = 1084

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 51/307 (16%), Positives = 110/307 (35%), Gaps = 36/307 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +     +   +  R+ F+S++  +      L  +   G ++R  +  +D  +   R   N
Sbjct: 210 HPGSLRQPMPWEGRLYFISDADGNDN----LYSVTPGGDDLRQHSQYKDFQIRAARI--N 263

Query: 223 QQKVAY----------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             K+ +               +++L + L      R  + + N    +   R + +G +A
Sbjct: 264 NGKLVFQMGADIRVMDIASGKDEVLPLTLTSDFTARRARWVNNPMDYVSDVRLAPSGDKA 323

Query: 273 LISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           +I+ +      +           ++         +A  S D   +   SD  G+++L+  
Sbjct: 324 VITAR----SKVAIAATDGRRLVQVGVPADSRIRNAVLSHDGQSVFGISDASGEQELWRF 379

Query: 332 QSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            ++GSD   +++QD  A     V SP G  +A   + G    + +          +V   
Sbjct: 380 PADGSDGGVQLTQDASAMRMSLVLSPDGRYLAHDDYDG---NLYLYDIKKGTNSRIVTGH 436

Query: 391 NLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASD 439
               P     WSP  R L       G    ++    L  + +  +        +PA++ D
Sbjct: 437 QGLGPYGDIIWSPDSRFLALGMNVMGQNRGQIVLYSLEEKRQASLTSDKYESFSPAFSRD 496

Query: 440 PQWVGFM 446
            +W+ F+
Sbjct: 497 GEWLYFL 503



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 71/239 (29%), Gaps = 28/239 (11%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              D     P    +   + +    D        ++        R+ +  +     R S 
Sbjct: 22  HGSDGYYRFPELHND--TLVFTAEGD------LWLNRLGQAQASRLTSQSAEESQARISP 73

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G +       D   ++Y + +     +R++          +S D   +    +  G   
Sbjct: 74  DGTQVAFVANYDGTDEVYLMPIGGGEAKRVSFENSRVRLQGWSQDGRVLYATDNAFGPAN 133

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-------------SGEKFAIG 374
            +V++       +      A   +     +G  + F +F              G +  + 
Sbjct: 134 YWVLRLVDPKTLKTEDLPLADAIEGAMDDKGQYLYFVRFGLQATGDNAKVYRGGARGELW 193

Query: 375 VMKKDGSQ--ERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             +   ++  ERLL     +L+ P   P    L F    DG     LYS+   G +   
Sbjct: 194 RYELGSNKEAERLLEGHPGSLRQPM--PWEGRLYFISDADG--NDNLYSVTPGGDDLRQ 248



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 67/183 (36%), Gaps = 9/183 (4%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           ++ + +   DG  +  +    D  +     S + Q V   +    +           D  
Sbjct: 328 RSKVAIAATDGRRLVQVGVPADSRIRNAVLSHDGQSVFGISDASGEQELWRFPADGSDGG 387

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINIS 306
            +   +  +M ++   S +G+        D   ++Y  D++     R+      L     
Sbjct: 388 VQLTQDASAMRMSLVLSPDGRYLA---HDDYDGNLYLYDIKKGTNSRIVTGHQGLGPYGD 444

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQGDLIAFT 364
             +SPDS  +    +  G+ +  ++  +  ++++  ++ DK  S F P +S  G+ + F 
Sbjct: 445 IIWSPDSRFLALGMNVMGQNRGQIVLYSLEEKRQASLTSDKYES-FSPAFSRDGEWLYFL 503

Query: 365 KFS 367
              
Sbjct: 504 SNR 506



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 90/265 (33%), Gaps = 33/265 (12%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G        S+     + R SP+  +VA+    D     VYLM        KR+    S 
Sbjct: 52  GQAQASRLTSQSAEESQARISPDGTQVAFVANYDG-TDEVYLMPIG-GGEAKRVSFENSR 109

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYS---VDLQSNATERLTNTLFINISASYSPDSSQI 316
           +    +S +G+    +       + +    VD ++  TE L     I    +       +
Sbjct: 110 VRLQGWSQDGRVLYATDNAFGPANYWVLRLVDPKTLKTEDLPLADAI--EGAMDDKGQYL 167

Query: 317 VFES------------DREG-KEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIA 362
            F               R G + +L+  +   + + +R+ +    S   P+  P    + 
Sbjct: 168 YFVRFGLQATGDNAKVYRGGARGELWRYELGSNKEAERLLEGHPGSLRQPM--PWEGRLY 225

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           F   +     +  +   G   R   +  + Q      +   L+F        G+ +  +D
Sbjct: 226 FISDADGNDNLYSVTPGGDDLRQHSQYKDFQIRAARINNGKLVF------QMGADIRVMD 279

Query: 423 L-NGRNETL---INTPAYASDPQWV 443
           + +G++E L   + +   A   +WV
Sbjct: 280 IASGKDEVLPLTLTSDFTARRARWV 304



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 101/320 (31%), Gaps = 53/320 (16%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D + + G    S      +     SD   Q +T +       ++   +            
Sbjct: 360 DGQSVFGISDASGEQELWRFPADGSDGGVQ-LTQDASAMRMSLVLSPDGRYLAHDDYDGN 418

Query: 195 VMDRD---GANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           +   D   G N R +T  +      +  +SP+ + +A             ++ +  ++  
Sbjct: 419 LYLYDIKKGTNSRIVTGHQGLGPYGDIIWSPDSRFLALGMNVMGQNRGQIVLYSLEEKRQ 478

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQK----------DEAMDIYSVDLQSN-------- 292
             + + +    +P FS +G+       +           +       D ++         
Sbjct: 479 ASLTSDKYESFSPAFSRDGEWLYFLSNREFNATPGSPWGDRNMGPVFDKRTGVFALALRQ 538

Query: 293 -------ATERLTNTLFINISASYSPDSSQIV-FESDREG-KEQLYVMQSNGSDQKRISQ 343
                      LT +         + D  + V  + D  G + +L+ +     +   ++ 
Sbjct: 539 DARFAFERPTELTASPK-------AADGDKPVSLKVDWPGLEGRLWQVPVGTGNFSNLTL 591

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             +  Y        GD       +G + A+ V K DG   +L     ++ +   S  G+ 
Sbjct: 592 GADRLYLL-----DGD------IAGNQSALKVAKFDGLAPKLDTFSDDIGSYVLSTDGKK 640

Query: 404 LIFSRKKDGDTGSKLYSIDL 423
           L+ S+K + +   +L  +D 
Sbjct: 641 LLLSKKSNPN---ELLIVDA 657


>gi|189424667|ref|YP_001951844.1| peptidase C14 caspase catalytic subunit p20 [Geobacter lovleyi SZ]
 gi|189420926|gb|ACD95324.1| peptidase C14 caspase catalytic subunit p20 [Geobacter lovleyi SZ]
          Length = 1088

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 81/243 (33%), Gaps = 27/243 (11%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +    + +L     SP+ + VA   +     +    VYL DT      +R+  F   +  
Sbjct: 81  IAAGSEGMLHAVALSPDGRLVAAAGWTGVSWDGSYSVYLFDTSSGEMRQRLTGFPKPLKR 140

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFE 319
             FS +GK+  + +       +Y V +     +RL     +N       +      +   
Sbjct: 141 LAFSPDGKKLAVGLHSSGG--VYLVRVSDG--KRLMFDASLNGTCFGLVFDQKGGLLA-G 195

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD+    QL     +G+    +  ++         SP    +A     G +  +     D
Sbjct: 196 SDQG---QLCRYTPDGARVYVVQTEERTKLLSMALSPDSRYLALVYGDGHQVELRTA-AD 251

Query: 380 GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           G  E +L        +  WS  G+ ++ +     + G KL           L+   A   
Sbjct: 252 GRFESVLQRPGGRFFSVAWSRDGKQILAAGNLKAEDGRKL-----------LVTWSAEQR 300

Query: 439 DPQ 441
            PQ
Sbjct: 301 RPQ 303


>gi|113972067|ref|YP_735860.1| peptidase S9 prolyl oligopeptidase [Shewanella sp. MR-4]
 gi|113886751|gb|ABI40803.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sp. MR-4]
          Length = 681

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/317 (17%), Positives = 103/317 (32%), Gaps = 68/317 (21%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTR 245
                 L   D +G N R +T  +   + EP FSP+ + +A+ +  + +D  ++YL+   
Sbjct: 67  DKGSTQLWRFDGEGKNNRAITA-KGLKVSEPVFSPDGKTLAFISERNDDDAGQIYLLPMD 125

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALI------------------------------- 274
                 ++ +  + +   ++   GK                                   
Sbjct: 126 GPGEASKLTDIPTGVNGIKW--VGKHLYFISNIFPEQNWEQMKAQLKTDKDNKVSARQWN 183

Query: 275 ---------SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQI 316
                     + +     ++ +     A E +T  L   +             SPD   I
Sbjct: 184 ALPYSQFDHWLDERRQAHVFRIPATGGAVEAVTQPLGHEL-PRSSQSSSSYDISPDERLI 242

Query: 317 VFE---SDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            F    SD   + K  L++    GS  + I+ D  A   +P +SP G+ +AFT+     F
Sbjct: 243 AFSTYGSDNRVDPKLDLFLATIGGSKAENITPDNPAPDLNPTFSPNGNTLAFTRQKIPGF 302

Query: 372 -----AIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + +M     +   L  D +       W+P  +   F    D    +++Y ID  
Sbjct: 303 YADTARLMLMDVSSRKLTTLTADWDRSVSQFEWTPDSKG--FYASIDDAATNRIYHIDAK 360

Query: 425 GRNETLINTPAYASDPQ 441
                 I      S P 
Sbjct: 361 SGKAKAITQATDFSQPA 377



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 67/177 (37%), Gaps = 14/177 (7%)

Query: 266 SSNGKRALISV-----QKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFE 319
           S + +    S      + D  +D++   +  +  E +T +    +++ ++SP+ + + F 
Sbjct: 236 SPDERLIAFSTYGSDNRVDPKLDLFLATIGGSKAENITPDNPAPDLNPTFSPNGNTLAFT 295

Query: 320 SDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             +         +L +M  +      ++ D + S     W+P       +        I 
Sbjct: 296 RQKIPGFYADTARLMLMDVSSRKLTTLTADWDRSVSQFEWTPDSKGFYASIDDAATNRIY 355

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETL 430
            +     + + + + ++   P  +  G+ +     +     ++L SI+  NG+ E L
Sbjct: 356 HIDAKSGKAKAITQATDFSQPAIAKDGQLIA--TNQSFLYPARLVSINPRNGKTERL 410



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 95/295 (32%), Gaps = 70/295 (23%)

Query: 217 PRFSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  S   + +      Y   +D+   +++  D    +  + I      +  P FS +GK 
Sbjct: 46  PVVSSTGEHIIAPVTEYDLKEDKGSTQLWRFDGE-GKNNRAITAKGLKVSEPVFSPDGKT 104

Query: 272 ALISVQK--DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-------- 320
                ++  D+A  IY + +       +LT+         +      + F S        
Sbjct: 105 LAFISERNDDDAGQIYLLPMDGPGEASKLTDIPTGVNGIKWV--GKHLYFISNIFPEQNW 162

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQDKEA- 347
                                           D   +  ++ + + G   + ++Q     
Sbjct: 163 EQMKAQLKTDKDNKVSARQWNALPYSQFDHWLDERRQAHVFRIPATGGAVEAVTQPLGHE 222

Query: 348 ------SYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLVED--SNLQA 394
                 S      SP   LIAF+ +  +        + +    GS+   +  D  +    
Sbjct: 223 LPRSSQSSSSYDISPDERLIAFSTYGSDNRVDPKLDLFLATIGGSKAENITPDNPAPDLN 282

Query: 395 PTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
           PT+SP+G +L F+R+K        ++L  +D++ R  T +        S  +W  
Sbjct: 283 PTFSPNGNTLAFTRQKIPGFYADTARLMLMDVSSRKLTTLTADWDRSVSQFEWTP 337



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 68/215 (31%), Gaps = 12/215 (5%)

Query: 174 NSRILFVSESVVSGII--KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           + R++  S       +  K  L +    G+    +TP        P FSPN   +A+   
Sbjct: 238 DERLIAFSTYGSDNRVDPKLDLFLATIGGSKAENITPDNPAPDLNPTFSPNGNTLAFTRQ 297

Query: 232 DDEDIL----RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                     R+ LMD    +      ++   +    ++ + K    S+       IY +
Sbjct: 298 KIPGFYADTARLMLMDVSSRKLTTLTADWDRSVSQFEWTPDSKGFYASIDDAATNRIYHI 357

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D +S   + +T         + + D   I          +L  +       +R+ Q  + 
Sbjct: 358 DAKSGKAKAITQATDF-SQPAIAKDGQLIATNQSFLYPARLVSINPRNGKTERLEQFNDE 416

Query: 348 SYFDPVWSPQGDL--IAFTKFSGEKFAIGVMKKDG 380
              D      G    + +  + G+   + V    G
Sbjct: 417 ILKDVDL---GTYESVTYKGYQGQDIQMWVHYPPG 448



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 67/247 (27%), Gaps = 64/247 (25%)

Query: 260 ILAPRFSSNGKRAL-----ISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +P  SS G+  +       +++D  +  ++  D +      +T          +SPD 
Sbjct: 43  IGSPVVSSTGEHIIAPVTEYDLKEDKGSTQLWRFDGEGKNNRAITAKGLKVSEPVFSPDG 102

Query: 314 SQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
             + F S+R  +   Q+Y++  +G  +     D         W   G  + F        
Sbjct: 103 KTLAFISERNDDDAGQIYLLPMDGPGEASKLTDIPTGVNGIKWV--GKHLYFISNIFPEQ 160

Query: 367 -----------------------------------SGEKFAIGVMKKDGSQERLLVEDSN 391
                                                 +  +  +   G     + +   
Sbjct: 161 NWEQMKAQLKTDKDNKVSARQWNALPYSQFDHWLDERRQAHVFRIPATGGAVEAVTQPLG 220

Query: 392 LQAPT---------WSPSGRSLIFSRKKDG---DTGSKLYSIDLNGRNETLIN--TPAYA 437
            + P           SP  R + FS        D    L+   + G     I    PA  
Sbjct: 221 HELPRSSQSSSSYDISPDERLIAFSTYGSDNRVDPKLDLFLATIGGSKAENITPDNPAPD 280

Query: 438 SDPQWVG 444
            +P +  
Sbjct: 281 LNPTFSP 287


>gi|83771564|dbj|BAE61695.1| unnamed protein product [Aspergillus oryzae]
          Length = 371

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 76/232 (32%), Gaps = 16/232 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +++    N++ + D     ++         +    FSP+ + +A  + D+     V L 
Sbjct: 9   RMITHSDDNTVRLWDPATGTLQQTLKGHTDPVNSMVFSPDGRLLASGSDDN----TVRLW 64

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTL 301
           D       + +      +    FS +G R L+S   D  + ++  D  +   ++ L    
Sbjct: 65  DPVTGTLQQTLEGHTGWVKTMVFSPDG-RLLVSGSDDNTVRLW--DPVTGTLQQTLKGHT 121

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S  +SPD   +   SD      + +        ++  +          +SP G L+
Sbjct: 122 DPVNSMVFSPDGRLLASGSD---DNTVRLWDPVTGTLQQTLEGHTGWVKTVAFSPDGRLL 178

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKD 411
                      + +        +  ++       +  +SP GR L      D
Sbjct: 179 VSGSDDNT---VRLWDPVTGTLQQTLKGHTDPVNSMVFSPDGRLLASGSDDD 227



 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 77/224 (34%), Gaps = 16/224 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG   N++ + D     ++         +    FSP+ + +A  + D+     V L D 
Sbjct: 95  VSGSDDNTVRLWDPVTGTLQQTLKGHTDPVNSMVFSPDGRLLASGSDDN----TVRLWDP 150

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
                 + +      +    FS +G R L+S   D  + ++  D  +   ++ L      
Sbjct: 151 VTGTLQQTLEGHTGWVKTVAFSPDG-RLLVSGSDDNTVRLW--DPVTGTLQQTLKGHTDP 207

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S  +SPD   +   SD    + + +        ++  +          +SP G L+A 
Sbjct: 208 VNSMVFSPDGRLLASGSD---DDTVRLWDPATGALQQTLEGHTDPVEFVTFSPDGRLLAS 264

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
                    I +        +  +E       +  +S +GR L 
Sbjct: 265 CSSDKT---IRLWDPATGTLQQTLEGHTRSVVSVAFSTNGRLLA 305


>gi|17230283|ref|NP_486831.1| WD repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17131884|dbj|BAB74490.1| WD-repeat protein [Nostoc sp. PCC 7120]
          Length = 1189

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 92/248 (37%), Gaps = 20/248 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +     ++ + + +G   R         +    FSP+ + +A A++D      V L +  
Sbjct: 928  TASRDKTVKLWNLNGK-ERATLHGHQADVRSATFSPDSKTIASASWDT----TVKLWNLN 982

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              R    +   ++ +    FS +  + + +  +D    ++  + Q      L        
Sbjct: 983  -GREIMTLRGHQAGVRNVSFSPD-DQIIATASEDGTAKLW--NRQGQELVTLKGHQAGIQ 1038

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            + S+SPDS  I   S    K++   + +    +               +SP  + IA   
Sbjct: 1039 AVSFSPDSQVIATAS----KDKTVKLWNRQGKELLTLLGHRGEVNAVSFSPNRETIATAS 1094

Query: 366  FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               E   + +    G Q + L   D+ +++ ++SP G+ L  S    G     L+++D +
Sbjct: 1095 ---EDMTVKLWNLKGGQMQTLSGLDAGVKSVSFSPDGKVLA-SSDSLGKVT--LWNLDFD 1148

Query: 425  GRNETLIN 432
               E L+ 
Sbjct: 1149 SSPEKLLA 1156



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 95/228 (41%), Gaps = 25/228 (10%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             R        ++   +FSP+ +K+A A++D    ++++  D ++    +        + 
Sbjct: 569 RERNRLVGHGDVVTRVKFSPDGEKLASASWD--KTVKIWQRDGKLLHTLR---GHTDAVW 623

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +  FS +GK  + S  +D+ + ++ V+        LT+  ++     +SPDS  +     
Sbjct: 624 SVNFSPDGKMLV-SASRDKTVKVWRVE-DGQEIATLTHQNWVACIG-FSPDSKTVA---S 677

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            E    + +    G + K      +A      +SP+G++IA     G      V   DG 
Sbjct: 678 MEWNGTMRLWNLQGQELKSF-PTHKAPVVAVHFSPKGNMIATASRDGTA---KVWSLDGK 733

Query: 382 QERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +  LL    +        +S  G++L+ + +   D  +K++  DL G+
Sbjct: 734 E--LLSLGGHKNWVMYVNFSEDGKNLVTASR---DKTAKIW--DLQGK 774



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 89/240 (37%), Gaps = 20/240 (8%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                    L   +FSP+ Q +A A+ D      V L +    +    +   ++ + +  F
Sbjct: 906  TLNGHSDTLRSLQFSPDGQIIATASRDK----TVKLWNLN-GKERATLHGHQADVRSATF 960

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S + K    S   D  + ++  +L       L        + S+SPD   I   +  +G 
Sbjct: 961  SPDSKTIA-SASWDTTVKLW--NLNGREIMTLRGHQAGVRNVSFSPDDQIIA-TASEDGT 1016

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ER 384
             +L+     G +   + +  +A      +SP   +IA          + +  + G +   
Sbjct: 1017 AKLW--NRQGQELVTL-KGHQAGIQAVSFSPDSQVIATASKDKT---VKLWNRQGKELLT 1070

Query: 385  LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            LL     + A ++SP+  ++  + +   D   KL+++   G+ +TL    A      +  
Sbjct: 1071 LLGHRGEVNAVSFSPNRETIATASE---DMTVKLWNLKG-GQMQTLSGLDAGVKSVSFSP 1126



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 123/325 (37%), Gaps = 35/325 (10%)

Query: 130 LWDVK---DRKQIIGKKFFSSPASWR-KIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           +W V    D K ++      +   WR +    I+     ++T +           S++V 
Sbjct: 622 VWSVNFSPDGKMLVSASRDKTVKVWRVEDGQEIA-----TLTHQNWVACIGFSPDSKTVA 676

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + +  G  ++     +  ++    FSP    +A A+ D     +V+ +D  
Sbjct: 677 SMEWNGTMRLWNLQGQELKSFPTHKAPVVAV-HFSPKGNMIATASRD--GTAKVWSLD-- 731

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +    +G  ++ ++   FS +GK  + +  +D+   I+  DLQ      L        
Sbjct: 732 -GKELLSLGGHKNWVMYVNFSEDGKNLV-TASRDKTAKIW--DLQGKELATLRGHSDTVA 787

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           SA +S D   I   S     ++   + +   ++ ++      + +    S  G L+  + 
Sbjct: 788 SAVFSRDGQTIATAS----SDKTVRLWNRKGEELQVFWGHTDAVWGVNLSKDGKLLVSSG 843

Query: 366 FSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY--- 419
             G      +   +  + + L     ++     ++SP G+ L         T +KL+   
Sbjct: 844 EDGTVRLWNMENGEAGKFQSLSFNLGEAAAGTISFSPDGKIL---GTTGRYTMAKLWNHQ 900

Query: 420 ---SIDLNGRNETLINTPAYASDPQ 441
               + LNG ++TL +   ++ D Q
Sbjct: 901 GQELVTLNGHSDTLRSLQ-FSPDGQ 924



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 110/284 (38%), Gaps = 29/284 (10%)

Query: 171  GDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            G   + +++V+ S      V+     +  + D  G  +  L       +    FS + Q 
Sbjct: 739  GGHKNWVMYVNFSEDGKNLVTASRDKTAKIWDLQGKELATL-RGHSDTVASAVFSRDGQT 797

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +A A+ D    +R++    R     +        +     S +GK  L+S  +D  + ++
Sbjct: 798  IATASSD--KTVRLW---NRKGEELQVFWGHTDAVWGVNLSKDGK-LLVSSGEDGTVRLW 851

Query: 286  SV-DLQSNATERLTNTLFINISA--SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++ + ++   + L+  L    +   S+SPD   +       G+  +  + ++   +    
Sbjct: 852  NMENGEAGKFQSLSFNLGEAAAGTISFSPDGKIL----GTTGRYTMAKLWNHQGQELVTL 907

Query: 343  QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSG 401
                 +     +SP G +IA          + +   +G +   L    +++++ T+SP  
Sbjct: 908  NGHSDTLRSLQFSPDGQIIATASRDKT---VKLWNLNGKERATLHGHQADVRSATFSPDS 964

Query: 402  RSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            +++  +     DT  KL+  +LNGR   TL    A   +  +  
Sbjct: 965  KTIASASW---DTTVKLW--NLNGREIMTLRGHQAGVRNVSFSP 1003



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 85/207 (41%), Gaps = 21/207 (10%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                 R   R+     ++   +FS +G++   S   D+ + I+  D        L    
Sbjct: 563 QSLYWVRERNRLVGHGDVVTRVKFSPDGEKLA-SASWDKTVKIWQRD--GKLLHTLRGHT 619

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++SPD   +V  S R+   +++ ++ +G +   ++   +       +SP    +
Sbjct: 620 DAVWSVNFSPDGKMLVSAS-RDKTVKVWRVE-DGQEIATLTH--QNWVACIGFSPDSKTV 675

Query: 362 AFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           A  +++G    + +    G + +      + + A  +SP G  +  + +   D  +K++S
Sbjct: 676 ASMEWNGT---MRLWNLQGQELKSFPTHKAPVVAVHFSPKGNMIATASR---DGTAKVWS 729

Query: 421 IDLNGRNETLINTPAYASDPQWVGFMD 447
           +D     + L++   + +   WV +++
Sbjct: 730 LDG----KELLSLGGHKN---WVMYVN 749


>gi|325921683|ref|ZP_08183517.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           gardneri ATCC 19865]
 gi|325547823|gb|EGD18843.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           gardneri ATCC 19865]
          Length = 711

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 50/272 (18%), Positives = 84/272 (30%), Gaps = 47/272 (17%)

Query: 214 LFEPRFSPNQQKVAYATYDDED-------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   + +A    +         L +  + TR    PKR+      + +P  S
Sbjct: 36  VSSPALSPDGSVLVFAKRQAKSSNGKPATGLWMRNLRTRDAAPPKRLTPEGWNVNSPALS 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------- 319
            +GK       +     +Y+  L     ++LT       S   SPD  +I F        
Sbjct: 96  PDGKTVYFLSSRSGTQQLYAQPLTGGTPQQLTAFAVDVDSYKLSPDGKRIAFSAGVFQDC 155

Query: 320 -SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD  G  +  +     +    +  D+        W+       F        A  V+  
Sbjct: 156 GSD-LGCTKTKLASVKNAKASGVVYDQLFVRHWDTWNDGRRNTLFVADLPAAGAKAVIGA 214

Query: 379 DGSQERLLVED-----SNLQAPTWSPSGRSLIFSRKKDGDTGSK---------------- 417
                 L  +            TWSP G S++ S +     G +                
Sbjct: 215 SAISATLAGDAPSKPFGGNDDYTWSPDGSSVVASVRVPQPHGPEAGKNAKAGSKPTGNDE 274

Query: 418 -------LYSIDLNGRNETLINTPAYASDPQW 442
                  LY +D  G++  +  T   AS+P W
Sbjct: 275 PWQTNFDLYRLDAAGKSAPVNLT---ASNPAW 303



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 52/332 (15%), Positives = 102/332 (30%), Gaps = 66/332 (19%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R      S  ++Q    + G   +++  V  +  SG++ + L V   D  N
Sbjct: 135 SYKLSPDGKRIA---FSAGVFQDCGSDLGCTKTKLASVKNAKASGVVYDQLFVRHWDTWN 191

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDTRIDRAPKRIGNFRSM 259
                              + ++      D         +         A          
Sbjct: 192 -------------------DGRRNTLFVADLPAAGAKAVIGASAISATLAGDAPSKPFGG 232

Query: 260 ILAPRFSSNGKRALISVQKDE-------------------------AMDIYSVDLQSNA- 293
                +S +G   + SV+  +                           D+Y +D    + 
Sbjct: 233 NDDYTWSPDGSSVVASVRVPQPHGPEAGKNAKAGSKPTGNDEPWQTNFDLYRLDAAGKSA 292

Query: 294 TERLT-NTLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQD 344
              LT +    +    +S D   +         FE+DR G   L  M       + I+  
Sbjct: 293 PVNLTASNPAWDAGPVFSSDGKTLYYRAMKRPGFEADRFG---LIAMDVASGKTREIAPK 349

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S  + V S  G  +  +     +  +  +     +   LV + ++ APT +  G +L
Sbjct: 350 WDRSAGEIVLSDDGASLYTSADDLGEHPLFKIDIASGEATKLVGEGSVHAPTLA--GNTL 407

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            F+R     +G +++  D+ G+    I   A 
Sbjct: 408 AFTRN-SLKSGDQVFVSDVQGQGLRAITQSAG 438


>gi|15836620|ref|NP_297308.1| dipeptidyl-peptidase [Xylella fastidiosa 9a5c]
 gi|9104777|gb|AAF82828.1|AE003856_7 dipeptidyl-peptidase [Xylella fastidiosa 9a5c]
          Length = 795

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 101/306 (33%), Gaps = 40/306 (13%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD- 197
           ++ K          KI H +++  Y+     +          +    +     +L ++D 
Sbjct: 246 LVTKAKNIDEGQIGKIPHYVTESGYEEFQDVR----------TRVGRNIPAPQTLWLIDL 295

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNF 256
           +DG   +    S   I  +P                E + +    D      P RI  N 
Sbjct: 296 KDGTARKLSFSSLPGINEDP---------------LEALRKANRKDPFKGERPVRIETNA 340

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-----RLTNTLFINISAS--- 308
            S + A  ++ +G+   + ++  +  D +   +           RL ++ +IN   +   
Sbjct: 341 DSNVPAIHWTQDGRNVAVDIRSIDNKDRWIAAVDLKQATLNVRHRLHDSAWINWDFNDFG 400

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS- 367
           + PD+  +   S+  G   LY +Q  G+ ++R           P +S  G  + F     
Sbjct: 401 WLPDNRTLWLLSEESGYSHLYTIQETGTPKQR--TFGHWEVSAPRFSADGRSVYFVCNPT 458

Query: 368 -GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               + +  +  D      L     ++    SP GR ++           +L  I  NG 
Sbjct: 459 WPGGYEVCKLDLDSGHFDTLTALQGVEDFDLSPDGRQIL-VLYSGSYLPPQLAVISTNGG 517

Query: 427 NETLIN 432
              ++ 
Sbjct: 518 QARVLT 523



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 71/201 (35%), Gaps = 12/201 (5%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPK-RIGNF 256
           G     +  + D  +    ++ + + VA    + D++D     +   +     + R+ + 
Sbjct: 330 GERPVRIETNADSNVPAIHWTQDGRNVAVDIRSIDNKDRWIAAVDLKQATLNVRHRLHDS 389

Query: 257 RSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             +        +  + +   +  ++     +Y++  ++   ++ T   +   +  +S D 
Sbjct: 390 AWINWDFNDFGWLPDNRTLWLLSEESGYSHLYTIQ-ETGTPKQRTFGHWEVSAPRFSADG 448

Query: 314 SQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-AFTKFSGEK 370
             + F  +    G  ++  +  +      ++  +    FD   SP G  I      S   
Sbjct: 449 RSVYFVCNPTWPGGYEVCKLDLDSGHFDTLTALQGVEDFD--LSPDGRQILVLYSGSYLP 506

Query: 371 FAIGVMKKDGSQERLLVEDSN 391
             + V+  +G Q R+L +   
Sbjct: 507 PQLAVISTNGGQARVLTDTRT 527



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 62/159 (38%), Gaps = 10/159 (6%)

Query: 202 NIRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           N+R+       I ++     + P+ + +   + +       +L   +    PK+      
Sbjct: 381 NVRHRLHDSAWINWDFNDFGWLPDNRTLWLLSEESG---YSHLYTIQETGTPKQRTFGHW 437

Query: 259 MILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            + APRFS++G+              ++  +DL S   + LT    +      SPD  QI
Sbjct: 438 EVSAPRFSADGRSVYFVCNPTWPGGYEVCKLDLDSGHFDTLTALQGVEDF-DLSPDGRQI 496

Query: 317 -VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            V  S      QL V+ +NG   + ++  + +++    W
Sbjct: 497 LVLYSGSYLPPQLAVISTNGGQARVLTDTRTSTFKAKQW 535



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 51/157 (32%), Gaps = 9/157 (5%)

Query: 288 DLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-----RI 341
             +     R+ TN      +  ++ D   +  +      +  ++   +          R+
Sbjct: 327 PFKGERPVRIETNADSNVPAIHWTQDGRNVAVDIRSIDNKDRWIAAVDLKQATLNVRHRL 386

Query: 342 SQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                    + D  W P    +           +  +++ G+ ++       + AP +S 
Sbjct: 387 HDSAWINWDFNDFGWLPDNRTLWLLSEESGYSHLYTIQETGTPKQRTFGHWEVSAPRFSA 446

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPA 435
            GRS+ F        G ++  +DL+ G  +TL     
Sbjct: 447 DGRSVYFVCNPTWPGGYEVCKLDLDSGHFDTLTALQG 483


>gi|317031732|ref|XP_001393388.2| hypothetical protein ANI_1_988084 [Aspergillus niger CBS 513.88]
          Length = 1463

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 94/307 (30%), Gaps = 64/307 (20%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D   + ++         +     SP+ +++A A+ D      V + D  
Sbjct: 916  SGSQDRTVKIWDAVTSTLQQTLKGHTDSVISISISPDGRRLASASMDR----TVKVWDLM 971

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 + +    S I    FS +G+    S   D+   I+  DL +   + L        
Sbjct: 972  TSTH-QTLNGHESYIYGVAFSPDGRLLA-SGSYDKTARIW--DLTTGTHQTLMGHDDYVY 1027

Query: 306  SASYSPDSSQIVFESDRE-----------------------------------GKEQLYV 330
            S S+S D  ++   +  +                                   G   + +
Sbjct: 1028 SVSFSADGRRLASGAKDKTVKIWDVATGALQDTIQTDLHIESAVLLPDGRLAVGDRLIKI 1087

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED- 389
                    ++    K  S      S  G L+A T  S     I V          + E  
Sbjct: 1088 WDLATGTMQQTLGTKNFSAPKVASSQDGRLLACTSGS----NIIVWNMSTQTLHQICEGH 1143

Query: 390  -SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL------------NGRNETLINTPAY 436
             + + A   SP GR L    +   D   K++ +D                +  LI +  +
Sbjct: 1144 RNQVWAVAISPDGRRLASGSQ---DATIKIWDLDAPFYEPPFRERERTAESHGLITSMVF 1200

Query: 437  ASDPQWV 443
            + D +W+
Sbjct: 1201 SPDGKWL 1207



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 48/360 (13%), Positives = 110/360 (30%), Gaps = 49/360 (13%)

Query: 120  GKDRLRVEFRLWDVKDR--KQIIGKK---FFSS-PASWRKIAHTISDDIYQSITGEKGDF 173
                     R+WD+     + ++G     +  S  A  R++A    D   +      G  
Sbjct: 998  ASGSYDKTARIWDLTTGTHQTLMGHDDYVYSVSFSADGRRLASGAKDKTVKIWDVATGAL 1057

Query: 174  NSRI--------LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
               I          +       +    + + D     ++    +++    +   S + + 
Sbjct: 1058 QDTIQTDLHIESAVLLPDGRLAVGDRLIKIWDLATGTMQQTLGTKNFSAPKVASSQDGRL 1117

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +A  +        + + +       +     R+ + A   S +G+R   S  +D  + I+
Sbjct: 1118 LACTS-----GSNIIVWNMSTQTLHQICEGHRNQVWAVAISPDGRRLA-SGSQDATIKIW 1171

Query: 286  SVDL-----QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS---- 336
             +D           ER   +  +  S  +SPD   +V     +  E + +          
Sbjct: 1172 DLDAPFYEPPFRERERTAESHGLITSMVFSPDGKWLV-SGGGDDTESVKIWDLETKLWGS 1230

Query: 337  ---DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SN 391
                  +  +          +SP    +A +        I +        +  +E     
Sbjct: 1231 ANDALHQTLKGHRHFIHWLSFSPDMRQLASSSADRT---IKIWDTATGSLQHTLEGHEWG 1287

Query: 392  LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-------AYASDPQWVG 444
            +    +SP GR L        D   +L+     G  + ++  P       A+++D +W+ 
Sbjct: 1288 VNIAVFSPDGRRLA---SGADDKTFRLWD-PATGTLQHILKHPTWLCRSVAFSADGRWLA 1343



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 18/207 (8%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQ 277
            F+P+   +       E I R+  ++       + I   + + + A  FS +G+    S  
Sbjct: 860  FAPSHSIIRRTFEMPEWISRLPEVEESWSAELESIEGHKDIAVRAVAFSPDGRWLA-SGS 918

Query: 278  KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNG 335
            +D  + I+  D  ++  ++ L       IS S SPD  ++   S DR     + V     
Sbjct: 919  QDRTVKIW--DAVTSTLQQTLKGHTDSVISISISPDGRRLASASMDRT----VKVWDLMT 972

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQA 394
            S  + +    E+  +   +SP G L+A   +        +        + L+  D  + +
Sbjct: 973  STHQTL-NGHESYIYGVAFSPDGRLLASGSYDKTA---RIWDLTTGTHQTLMGHDDYVYS 1028

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             ++S  GR L        D   K++ +
Sbjct: 1029 VSFSADGRRLA---SGAKDKTVKIWDV 1052



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 83/238 (34%), Gaps = 22/238 (9%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            A +  +   +D  +    FSP+ + +A  + D      V + D       + +      +
Sbjct: 889  AELESIEGHKDIAVRAVAFSPDGRWLASGSQDR----TVKIWDAVTSTLQQTLKGHTDSV 944

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            ++   S +G+R   S   D  + ++  DL ++  + L          ++SPD   +   S
Sbjct: 945  ISISISPDGRRLA-SASMDRTVKVW--DLMTSTHQTLNGHESYIYGVAFSPDGRLLASGS 1001

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                 +   +        + +    +   +   +S  G  +A +    +   I       
Sbjct: 1002 Y---DKTARIWDLTTGTHQTL-MGHDDYVYSVSFSADGRRLA-SGAKDKTVKIW--DVAT 1054

Query: 381  SQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               +  +  D ++++    P GR  +      GD   K++ +   G  +  + T  ++
Sbjct: 1055 GALQDTIQTDLHIESAVLLPDGRLAV------GDRLIKIWDL-ATGTMQQTLGTKNFS 1105



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 72/204 (35%), Gaps = 26/204 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ +  G        ++WD++                  K+  + +D ++Q++ G +   
Sbjct: 1204 GKWLVSGGGDDTESVKIWDLET-----------------KLWGSANDALHQTLKGHRHFI 1246

Query: 174  NSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            +            S     ++ + D    ++++     +  +    FSP+ +++A    D
Sbjct: 1247 HWLSFSPDMRQLASSSADRTIKIWDTATGSLQHTLEGHEWGVNIAVFSPDGRRLASGADD 1306

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                    L D         + +   +  +  FS++G+     +  D  + I+  D  + 
Sbjct: 1307 K----TFRLWDPATGTLQHILKHPTWLCRSVAFSADGRWLATGL--DRIIRIW--DPDTG 1358

Query: 293  ATERLTNTLFINISASYSPDSSQI 316
              +   +T     + ++S D + I
Sbjct: 1359 TLQHTIDTQKHIHNLAFSSDGNSI 1382


>gi|312892049|ref|ZP_07751549.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Mucilaginibacter paludis DSM 18603]
 gi|311295421|gb|EFQ72590.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Mucilaginibacter paludis DSM 18603]
          Length = 684

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/329 (15%), Positives = 96/329 (29%), Gaps = 65/329 (19%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            Q +T E G      +      V+      +  MD DG N+  LT ++       R SP+
Sbjct: 78  VQQLTNEPGSKAILKIDALTGRVTYWYDGRIWQMDSDGGNLAMLTVNQQDDFDNIRISPD 137

Query: 223 QQKVAYA----------------------------------TYDDEDILRVYLMDTRIDR 248
            +K+ Y                                   T+       V+L D    +
Sbjct: 138 GKKIMYTRDVQIQKVLGKDRYADLPKATAYVITDLNYRHWDTWSTGKFSHVFLADYDNGK 197

Query: 249 APKRIGNFRSMILA----PR-------FSSNGKRALIS--------VQKDEAMDIYSVDL 289
                             P        FS + K+ L            +     +Y   +
Sbjct: 198 ISNEKDIMHGEAFDTPQKPAGGLEDLIFSPDSKQVLYVCKKKSGKDYAQSTNTGLYQYTI 257

Query: 290 QSNATERLTNTL-FINISASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRISQ 343
            ++ T  LT  +   +   S+S D +++ + S         K  + +       +  ++ 
Sbjct: 258 ATDETRELTQGMNGYDTQPSFSHDGNRLAWLSMKEDGYEADKNDIIIKDIKTGIKVNLTA 317

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-----KDGSQERLLVEDSNLQAPTWS 398
             + S     +S     I F         +  +        G     + +          
Sbjct: 318 KWDESISSFTFSKDDSKIYFIAVHNGTEQLFSVDVKKPSPSGESIVQITKGQWDVTSIIG 377

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            SG  L+ +R  D +  +++YS++L G N
Sbjct: 378 QSGNQLLVTRT-DMNHAAEIYSVNLPGGN 405



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 60/161 (37%), Gaps = 9/161 (5%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSM 259
           R LT   +    +P FS +  ++A+ +  ++    D   + + D +          +   
Sbjct: 263 RELTQGMNGYDTQPSFSHDGNRLAWLSMKEDGYEADKNDIIIKDIKTGIKVNLTAKWDES 322

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDL-----QSNATERLTNTLFINISASYSPDSS 314
           I +  FS +  +       +    ++SVD+        +  ++T   +   S      + 
Sbjct: 323 ISSFTFSKDDSKIYFIAVHNGTEQLFSVDVKKPSPSGESIVQITKGQWDVTSIIGQSGNQ 382

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            +V  +D     ++Y +   G +  ++S   + +Y   + S
Sbjct: 383 LLVTRTDMNHAAEIYSVNLPGGNMHKLSDINDKAYNKLMTS 423



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 80/254 (31%), Gaps = 70/254 (27%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINI 305
           ++G F S I+ P    + K  + SV            +++SV +     ++LTN      
Sbjct: 34  KLGRFGSGIITP----DEKNIIYSVSTYNMGLNKAEPNLFSVPVTGGPVQQLTNEPGSKA 89

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
                  + ++ +  D     +++ M S+G +   ++ +++  + +   SP G  I +T+
Sbjct: 90  ILKIDALTGRVTYWYD----GRIWQMDSDGGNLAMLTVNQQDDFDNIRISPDGKKIMYTR 145

Query: 366 -----------------------------------FSGEKFAIGVMKKDGS---QERLLV 387
                                               +G+   + +   D      E+ ++
Sbjct: 146 DVQIQKVLGKDRYADLPKATAYVITDLNYRHWDTWSTGKFSHVFLADYDNGKISNEKDIM 205

Query: 388 EDSNLQAPT----------WSPSGRSLIFS------RKKDGDTGSKLYSIDLNGRNETLI 431
                  P           +SP  + +++       +     T + LY   +       +
Sbjct: 206 HGEAFDTPQKPAGGLEDLIFSPDSKQVLYVCKKKSGKDYAQSTNTGLYQYTIATDETREL 265

Query: 432 N--TPAYASDPQWV 443
                 Y + P + 
Sbjct: 266 TQGMNGYDTQPSFS 279


>gi|297203258|ref|ZP_06920655.1| WD-40 repeat-containing protein [Streptomyces sviceus ATCC 29083]
 gi|197711344|gb|EDY55378.1| WD-40 repeat-containing protein [Streptomyces sviceus ATCC 29083]
          Length = 1222

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 102/316 (32%), Gaps = 34/316 (10%)

Query: 109  QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
              + T R    G+     E +LWD                A  RK        +      
Sbjct: 899  HAVATVRQGPVGRG----EVQLWDAGTGDHEASLPLDKDSAPGRKQPQFPVSRLAAVGFD 954

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              G         + SV  G+I+        D A  R              FSP+  ++A 
Sbjct: 955  PTGR-----ALAARSVKKGVIE------VLDVATGRIRLSRALGAGGAAVFSPDGTRLA- 1002

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                 +  + +  + T +     + G+ R       F+ +G+       + +   +   D
Sbjct: 1003 -VIGRQGAVHLLNLSTGVRHTAAKPGSRRM-----AFTPDGRTLAAVGNEADGDQVRLFD 1056

Query: 289  LQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
              +  ++R        +SA  +SPD   +   S   G   ++ ++   + + + S   E 
Sbjct: 1057 TATGRSQRTIKLGARFLSAFAFSPDGRTLATVSGSRGSVTIWNVR---TGRLQDSFRVEG 1113

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                  +SP    +A    +G    + +        RL +   + +A  +SP GR+L   
Sbjct: 1114 EVASLAFSPDARTLA----AGGARGVQLWDLATGLHRLTLPARSPEAVAFSPDGRTLA-- 1167

Query: 408  RKKDGDTGSKLYSIDL 423
                      L+S+DL
Sbjct: 1168 --IGAAGSVGLWSVDL 1181



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 92/277 (33%), Gaps = 29/277 (10%)

Query: 174  NSRILFVSESVVSGIIKNSLC-----------VMDRDGANIRYLTPSRDQILFEPRFSPN 222
            +   +        G  +  L             +D+D A  R         L    F P 
Sbjct: 897  DGHAVATVRQGPVGRGEVQLWDAGTGDHEASLPLDKDSAPGRKQPQFPVSRLAAVGFDPT 956

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             + +A  +        + ++D    R   R+        A  FS +G R  +  ++    
Sbjct: 957  GRALAARSVKKG---VIEVLDVATGRI--RLSRALGAGGAAVFSPDGTRLAVIGRQG--- 1008

Query: 283  DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
             ++ ++L +    R T     +   +++PD   +    +    +Q+ +  +     +R  
Sbjct: 1009 AVHLLNLSTGV--RHTAAKPGSRRMAFTPDGRTLAAVGNEADGDQVRLFDTATGRSQRTI 1066

Query: 343  QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            +          +SP G  +A    S     I  ++    Q+   VE   + +  +SP  R
Sbjct: 1067 KLGARFLSAFAFSPDGRTLATVSGSRGSVTIWNVRTGRLQDSFRVE-GEVASLAFSPDAR 1125

Query: 403  SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            +L       G  G +L+ +   G     +  PA + +
Sbjct: 1126 TLA----AGGARGVQLWDL-ATG--LHRLTLPARSPE 1155



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 86/278 (30%), Gaps = 34/278 (12%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +V +      + +    G  +R+     D       FSP+   +A A     D + + L
Sbjct: 603 HTVAATSRDGKVRIWSLPGGRLRHTFTGYDSGEVA-AFSPDGGTLAVAFARGADGM-IGL 660

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +D    R  + I      +    FS +G+    +      +     D+ +    R    L
Sbjct: 661 LDPVTGRKLRTITVPDGSVRGMAFSPDGRTVAAASVTTVRVW----DVATGRKRRGFTWL 716

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +    A + PD   +       G + L  +    + + R  +          +SP G   
Sbjct: 717 YPQAVA-FGPDGRTVA----AAGLDGLVRVWDVVTGRTRTVRGDRIDGKAVTFSPDGRTY 771

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIF------------- 406
           A  +  G    + + +      R   +D    +    ++P GR++               
Sbjct: 772 AVVRAGGS---VQLREAATGIVRRTFKDVPVGMNQLAFAPDGRTIAIPSLDGTVRLWDTA 828

Query: 407 -----SRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                +    G  G  +  + L+    TL+ +     D
Sbjct: 829 SGAARATVTAGHHGRGVMQVALSADGRTLVTSNNGDPD 866



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 60/181 (33%), Gaps = 11/181 (6%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            KR+      + +   S +      +  +D  + I+S+                   A++
Sbjct: 583 RKRLVGGTEPVDSIALSPDEHTVA-ATSRDGKVRIWSLP--GGRLRHTFTGYDSGEVAAF 639

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   +     R     + ++      + R     + S     +SP G  +A    +  
Sbjct: 640 SPDGGTLAVAFARGADGMIGLLDPVTGRKLRTITVPDGSVRGMAFSPDGRTVAAASVT-- 697

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              + V      ++R        QA  + P GR++        D   +++ + + GR  T
Sbjct: 698 --TVRVWDVATGRKRRGFTWLYPQAVAFGPDGRTVA---AAGLDGLVRVWDV-VTGRTRT 751

Query: 430 L 430
           +
Sbjct: 752 V 752



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 29/94 (30%), Gaps = 6/94 (6%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKD 411
             SP    +A T   G    + +    G + R      +  +   +SP G +L  +  + 
Sbjct: 597 ALSPDEHTVAATSRDG---KVRIWSLPGGRLRHTFTGYDSGEVAAFSPDGGTLAVAFARG 653

Query: 412 GDTGSKLYSIDLNGRNETLINTP-AYASDPQWVG 444
            D    L    + GR    I  P        +  
Sbjct: 654 ADGMIGLLD-PVTGRKLRTITVPDGSVRGMAFSP 686


>gi|153809123|ref|ZP_01961791.1| hypothetical protein BACCAC_03433 [Bacteroides caccae ATCC 43185]
 gi|149128456|gb|EDM19675.1| hypothetical protein BACCAC_03433 [Bacteroides caccae ATCC 43185]
          Length = 480

 Score = 81.6 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 63/439 (14%), Positives = 133/439 (30%), Gaps = 86/439 (19%)

Query: 44  NYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW 103
              P +IA   F          ++ +  D            +       +   IP+ + W
Sbjct: 41  TAIPYNIAPLNFEVKG------AQEIRADFAGEG------VNLLTVTGKHEIRIPK-KKW 87

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
             +         + K     L V   +W+    + +  K F       R  +  I + I 
Sbjct: 88  KEM---------LDKLKDKDLEVTVSVWNSSSPEGVRYKPFTV-----RVASDAIDEWIA 133

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
             +  E G     +L + +  ++   +  +     D +                 +SP  
Sbjct: 134 YRL-IEPGYEGWNMLGIYQRNLTSFEEKEIATNRADKSKCM-------NCHSFANYSP-- 183

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------ 277
           Q++ +    +     ++  D  + + P      +     P +  NG+  + S        
Sbjct: 184 QQMIFHVRGEGGGTALW-KDGELSKLPLETTGPKKSGTYPMWHPNGRYIVFSSNLTRQSF 242

Query: 278 ----------KDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFES---- 320
                      D   D+   D Q+      +R  +        ++S D   + +      
Sbjct: 243 LSEGEKALEVYDLQSDLILYDTQTKKVLTDKRFMDEAHWETFPAWSADGKSLYYCGALPK 302

Query: 321 -----DREGKEQLYVMQSN---GSDQKRISQ-----DKEASYFDPVWSPQGDLIAFTKFS 367
                 +     L  +  +   G+  +RI           S   P  SP G  + +TK +
Sbjct: 303 NMPIDYQNLHYSLCKVDFDEATGTFGERIDTIYNAERDGGSVSFPRLSPDGHYLLYTKAA 362

Query: 368 GEKFAIGVMKKDGSQERL---------LVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSK 417
              F I   + D    RL         ++  +  ++  +WS +GR ++FS ++     ++
Sbjct: 363 CATFPIWHKEADLKMLRLSDGEELDVEILNSAETESYHSWSSNGRWILFSSRRLDGRYTR 422

Query: 418 LYS--IDLNGRNETLINTP 434
           L+   +D  G        P
Sbjct: 423 LFIAWMDEKGNIHKPFLLP 441


>gi|298250143|ref|ZP_06973947.1| WD40 repeat containing protein [Ktedonobacter racemifer DSM 44963]
 gi|297548147|gb|EFH82014.1| WD40 repeat containing protein [Ktedonobacter racemifer DSM 44963]
          Length = 365

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 87/221 (39%), Gaps = 18/221 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L + +      R +T S   +     +S N Q + Y     ++ + +Y+ D +  +    
Sbjct: 87  LYIWNY--QQQRMITLSATPLWNTSAWSFNGQYLFYQESQGDNSVSMYVWDIQTRQKVSS 144

Query: 253 IGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASY 309
             N +        ++ +G +  + + +D+   +    L +     L          + ++
Sbjct: 145 YANEKYGEADLVCWAPDGSKIAL-LSRDQNKLLL---LAAQPLWPLFTLELPSAVGTFAW 200

Query: 310 SPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFT 364
           SPDS ++ F            Q++ +QS    Q+   Q    SY     WSP G+ IA  
Sbjct: 201 SPDSQKLAFIISTPEQSAWSVQIWDLQSRRKSQEIAFQGHPNSYNSQLAWSPDGNRIA-- 258

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            + G +  I +  K+ S   LL E S+     WSP+G+ L 
Sbjct: 259 AWGGGQLQI-IQTKNTSSSYLLTE-SDHGKMCWSPNGKYLA 297



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 87/256 (33%), Gaps = 36/256 (14%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             FN + LF  ES     +   +  +        Y      +      ++P+  K+A  +
Sbjct: 111 WSFNGQYLFYQESQGDNSVSMYVWDIQTRQKVSSYANEKYGEADLV-CWAPDGSKIALLS 169

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVD 288
            D   +L +          P       S +    +S + ++    +   E  A  +   D
Sbjct: 170 RDQNKLLLLAAQPLW----PLFTLELPSAVGTFAWSPDSQKLAFIISTPEQSAWSVQIWD 225

Query: 289 LQSNATERLT----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           LQS    +      +    N   ++SPD ++I       G  QL ++Q+  +    +  +
Sbjct: 226 LQSRRKSQEIAFQGHPNSYNSQLAWSPDGNRIA----AWGGGQLQIIQTKNTSSSYLLTE 281

Query: 345 KEASYFDPVWSPQGDLIA----------FTKFSGEKFAIGVMKKDGSQERLL--VEDSNL 392
            +       WSP G  +A          +T   G +F +     D +Q++ +        
Sbjct: 282 SDHGKMC--WSPNGKYLAVIDASDFMDFWTASLGSRFNVW----DITQQKTIHSFNRGTA 335

Query: 393 QAPT---WSPSGRSLI 405
             P    WS  G+ ++
Sbjct: 336 YVPEALGWSRDGKHIV 351



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 57/179 (31%), Gaps = 21/179 (11%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSD 337
           D    +Y  + Q      L+ T   N SA +S +   + ++ S  +    +YV       
Sbjct: 82  DHDGKLYIWNYQQQRMITLSATPLWNTSA-WSFNGQYLFYQESQGDNSVSMYVWDIQTRQ 140

Query: 338 -QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                + +K        W+P G  IA       K  +          + L     L+ P+
Sbjct: 141 KVSSYANEKYGEADLVCWAPDGSKIALLSRDQNKLLLL-------AAQPLWPLFTLELPS 193

Query: 397 ------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-----LINTPAYASDPQWVG 444
                 WSP  + L F       +   +   DL  R ++       +  +Y S   W  
Sbjct: 194 AVGTFAWSPDSQKLAFIISTPEQSAWSVQIWDLQSRRKSQEIAFQGHPNSYNSQLAWSP 252


>gi|291615637|ref|YP_003518379.1| YidR [Pantoea ananatis LMG 20103]
 gi|291150667|gb|ADD75251.1| YidR [Pantoea ananatis LMG 20103]
          Length = 428

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 82/210 (39%), Gaps = 42/210 (20%)

Query: 221 PNQQK----VAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           P+       +A+     +   E    V+++D      P+++ +F      P         
Sbjct: 233 PDGSWQRWAIAFTGDTLSASGEKCPEVFVVDL-----PEKLEDFAKPGFFP--------- 278

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-Y---SPDSSQIVF-ESDREGKEQ 327
                 + + D            R+T T  +      +   SPD S+I F  +D +   Q
Sbjct: 279 -----LEGSSDRLPAPPAGVRQRRITTTRGLASQPRHWLRSSPDGSKIAFLMADNQQVIQ 333

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           L+V+  NG +  ++++   +      W P+G+ IAF           V+   G  ERL V
Sbjct: 334 LWVVSPNGGEPHQVTRLTHSIQSAFSWQPRGEAIAFIS-DNSVMRCHVV--TGECERLTV 390

Query: 388 EDSNLQAPT-----WSPSGRSLIFSRKKDG 412
             S  +AP+     WSP G+ + F R+ +G
Sbjct: 391 RSS--EAPSGDAVVWSPDGKQIAFMREIEG 418



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 12/138 (8%)

Query: 247 DRAPKRIGNFRSMILAPR-F---SSNGKRALISVQKDEA-MDIYSVDLQSNATERLTN-T 300
               +RI   R +   PR +   S +G +    +  ++  + ++ V        ++T  T
Sbjct: 292 GVRQRRITTTRGLASQPRHWLRSSPDGSKIAFLMADNQQVIQLWVVSPNGGEPHQVTRLT 351

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPV-WSPQG 358
             I  + S+ P    I F SD      +        + +R++ +  EA   D V WSP G
Sbjct: 352 HSIQSAFSWQPRGEAIAFISDNS----VMRCHVVTGECERLTVRSSEAPSGDAVVWSPDG 407

Query: 359 DLIAFTKFSGEKFAIGVM 376
             IAF +       +  +
Sbjct: 408 KQIAFMREIEGWRQLFTV 425



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 75/211 (35%), Gaps = 28/211 (13%)

Query: 139 IIGKKFFSSPASWRKIAHTI-----------SDDIYQSITGEKGDFNSRILFVSESVVSG 187
           I  + +     SW++ A                +++     EK +  ++  F      S 
Sbjct: 225 IGNQGYQKPDGSWQRWAIAFTGDTLSASGEKCPEVFVVDLPEKLEDFAKPGFFPLEGSSD 284

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMD 243
            +          G   R +T +R  +  +PR     SP+  K+A+   D++ +++++++ 
Sbjct: 285 RLP-----APPAGVRQRRITTTR-GLASQPRHWLRSSPDGSKIAFLMADNQQVIQLWVVS 338

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  +      S+  A  +   G+             +    + +   ERLT     
Sbjct: 339 PNGGEPHQVTRLTHSIQSAFSWQPRGEAIAFISDNS----VMRCHVVTGECERLTVRSSE 394

Query: 304 NISA---SYSPDSSQIVFESDREGKEQLYVM 331
             S     +SPD  QI F  + EG  QL+ +
Sbjct: 395 APSGDAVVWSPDGKQIAFMREIEGWRQLFTV 425


>gi|56964382|ref|YP_176113.1| acylamino-acid-releasing enzyme [Bacillus clausii KSM-K16]
 gi|56910625|dbj|BAD65152.1| acylamino-acid-releasing enzyme [Bacillus clausii KSM-K16]
          Length = 648

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 49/237 (20%), Positives = 95/237 (40%), Gaps = 53/237 (22%)

Query: 260 ILAPRFSSNGKRALISVQK------DEAMDIYSVDLQ-SNATERLTNTLFINISASYSPD 312
           + +P  + +GK A I V K      D   +IY +D+Q S+   + T     +IS  +S  
Sbjct: 16  VTSPAVAPDGKSAAIVVTKMDKQKNDYIANIYGLDMQKSSHVSQWTFGNDKHISPKWSST 75

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------- 365
            + + + S+R GK Q+YV +   ++ ++++ D E       WSP G  IAF         
Sbjct: 76  GA-LAYLSNRTGKMQVYV-KQGMAEAEQLT-DLENGVNAFFWSPDGSKIAFAAYKQPEET 132

Query: 366 ------------------------FSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPS 400
                                   F G    IGV+     + + + +  +++    +S +
Sbjct: 133 GTSNDWPKPLVVEAMKYKSDERGLFDGSLKQIGVIDIATKKWKWVTDSPADVNVIDFSAN 192

Query: 401 GRSLIFS----RKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGFM 446
           GR+++ +       D      ++ IDL+   +T I        + + + D  +V  +
Sbjct: 193 GRAVLVAGSHNENNDFTFAVDVWFIDLDTGAKTQITKEPMVVQSGSVSPDGSYVALL 249



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 93/272 (34%), Gaps = 51/272 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDED-----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           +  P  +P+ +  A      +      I  +Y +D +      +        ++P++SS 
Sbjct: 16  VTSPAVAPDGKSAAIVVTKMDKQKNDYIANIYGLDMQKSSHVSQWTFGNDKHISPKWSST 75

Query: 269 GKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFE-------- 319
           G        +   M +Y    Q     E+LT+      +  +SPD S+I F         
Sbjct: 76  GA-LAYLSNRTGKMQVYV--KQGMAEAEQLTDLENGVNAFFWSPDGSKIAFAAYKQPEET 132

Query: 320 ------------------SDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                             SD  G      +Q+ V+       K ++ D  A      +S 
Sbjct: 133 GTSNDWPKPLVVEAMKYKSDERGLFDGSLKQIGVIDIATKKWKWVT-DSPADVNVIDFSA 191

Query: 357 QGD--LIAFTKFSGEKF----AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFS-- 407
            G   L+A +      F     +  +  D   +  + ++   +Q+ + SP G  +     
Sbjct: 192 NGRAVLVAGSHNENNDFTFAVDVWFIDLDTGAKTQITKEPMVVQSGSVSPDGSYVALLGH 251

Query: 408 -RKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            R+    T +KLY  D   +   L+++   AS
Sbjct: 252 EREYKNATLTKLYVYDCQKQEIRLLSSQLDAS 283



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 53/302 (17%), Positives = 102/302 (33%), Gaps = 59/302 (19%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
             +K +H +S   + +       ++S       S  +G     + V  + G         
Sbjct: 50  DMQKSSH-VSQWTFGNDKHISPKWSSTGALAYLSNRTGK----MQVYVKQGMAEAEQLTD 104

Query: 210 RDQILFEPRFSPNQQKVAYATY----------DDEDILRVYLMDTRIDRAP--------- 250
            +  +    +SP+  K+A+A Y          D    L V  M  + D            
Sbjct: 105 LENGVNAFFWSPDGSKIAFAAYKQPEETGTSNDWPKPLVVEAMKYKSDERGLFDGSLKQI 164

Query: 251 ----------KRIGNFRSMILAPRFSSNGKRALISVQKDEA------MDIYSVDLQSNAT 294
                     K + +  + +    FS+NG+  L++   +E       +D++ +DL + A 
Sbjct: 165 GVIDIATKKWKWVTDSPADVNVIDFSANGRAVLVAGSHNENNDFTFAVDVWFIDLDTGAK 224

Query: 295 ERLTNTLFINISASYSPDSSQIVFES-DREGKE----QLYVMQSNGSDQKRISQDKEASY 349
            ++T    +  S S SPD S +     +RE K     +LYV      + + +S   +AS 
Sbjct: 225 TQITKEPMVVQSGSVSPDGSYVALLGHEREYKNATLTKLYVYDCQKQEIRLLSSQLDASI 284

Query: 350 FDPV--------------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            D                W   G  I           +   + DG+  ++  E  ++   
Sbjct: 285 GDVAIGDFLQNIGSNGLKWGEDGQSIYALVSKEGDVNVWSFRLDGTVNQVTHEKRHINGF 344

Query: 396 TW 397
            +
Sbjct: 345 DF 346


>gi|134077926|emb|CAL00324.1| unnamed protein product [Aspergillus niger]
          Length = 1510

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 94/307 (30%), Gaps = 64/307 (20%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D   + ++         +     SP+ +++A A+ D      V + D  
Sbjct: 963  SGSQDRTVKIWDAVTSTLQQTLKGHTDSVISISISPDGRRLASASMDR----TVKVWDLM 1018

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 + +    S I    FS +G+    S   D+   I+  DL +   + L        
Sbjct: 1019 TSTH-QTLNGHESYIYGVAFSPDGRLLA-SGSYDKTARIW--DLTTGTHQTLMGHDDYVY 1074

Query: 306  SASYSPDSSQIVFESDRE-----------------------------------GKEQLYV 330
            S S+S D  ++   +  +                                   G   + +
Sbjct: 1075 SVSFSADGRRLASGAKDKTVKIWDVATGALQDTIQTDLHIESAVLLPDGRLAVGDRLIKI 1134

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED- 389
                    ++    K  S      S  G L+A T  S     I V          + E  
Sbjct: 1135 WDLATGTMQQTLGTKNFSAPKVASSQDGRLLACTSGS----NIIVWNMSTQTLHQICEGH 1190

Query: 390  -SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL------------NGRNETLINTPAY 436
             + + A   SP GR L    +   D   K++ +D                +  LI +  +
Sbjct: 1191 RNQVWAVAISPDGRRLASGSQ---DATIKIWDLDAPFYEPPFRERERTAESHGLITSMVF 1247

Query: 437  ASDPQWV 443
            + D +W+
Sbjct: 1248 SPDGKWL 1254



 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 49/358 (13%), Positives = 110/358 (30%), Gaps = 45/358 (12%)

Query: 120  GKDRLRVEFRLWDVKDR--KQIIGKK---FFSS-PASWRKIAHTISDDIYQSITGEKGDF 173
                     R+WD+     + ++G     +  S  A  R++A    D   +      G  
Sbjct: 1045 ASGSYDKTARIWDLTTGTHQTLMGHDDYVYSVSFSADGRRLASGAKDKTVKIWDVATGAL 1104

Query: 174  NSRI--------LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
               I          +       +    + + D     ++    +++    +   S + + 
Sbjct: 1105 QDTIQTDLHIESAVLLPDGRLAVGDRLIKIWDLATGTMQQTLGTKNFSAPKVASSQDGRL 1164

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +A  +        + + +       +     R+ + A   S +G+R   S  +D  + I+
Sbjct: 1165 LACTS-----GSNIIVWNMSTQTLHQICEGHRNQVWAVAISPDGRRLA-SGSQDATIKIW 1218

Query: 286  SVDL-----QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS---- 336
             +D           ER   +  +  S  +SPD   +V     +  E + +          
Sbjct: 1219 DLDAPFYEPPFRERERTAESHGLITSMVFSPDGKWLV-SGGGDDTESVKIWDLETKLWGS 1277

Query: 337  ---DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                  +  +          +SP    +A +  +     I        Q  L   +  + 
Sbjct: 1278 ANDALHQTLKGHRHFIHWLSFSPDMRQLA-SSSADRTIKIWDTATGSLQHTLEGHEWGVN 1336

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-------AYASDPQWVG 444
               +SP GR L        D   +L+     G  + ++  P       A+++D +W+ 
Sbjct: 1337 IAVFSPDGRRLA---SGADDKTFRLWD-PATGTLQHILKHPTWLCRSVAFSADGRWLA 1390



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 18/207 (8%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQ 277
            F+P+   +       E I R+  ++       + I   + + + A  FS +G+    S  
Sbjct: 907  FAPSHSIIRRTFEMPEWISRLPEVEESWSAELESIEGHKDIAVRAVAFSPDGRWLA-SGS 965

Query: 278  KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNG 335
            +D  + I+  D  ++  ++ L       IS S SPD  ++   S DR     + V     
Sbjct: 966  QDRTVKIW--DAVTSTLQQTLKGHTDSVISISISPDGRRLASASMDRT----VKVWDLMT 1019

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQA 394
            S  + +    E+  +   +SP G L+A   +        +        + L+  D  + +
Sbjct: 1020 STHQTL-NGHESYIYGVAFSPDGRLLASGSYDKTA---RIWDLTTGTHQTLMGHDDYVYS 1075

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             ++S  GR L        D   K++ +
Sbjct: 1076 VSFSADGRRLA---SGAKDKTVKIWDV 1099



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 83/238 (34%), Gaps = 22/238 (9%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            A +  +   +D  +    FSP+ + +A  + D      V + D       + +      +
Sbjct: 936  AELESIEGHKDIAVRAVAFSPDGRWLASGSQDR----TVKIWDAVTSTLQQTLKGHTDSV 991

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            ++   S +G+R   S   D  + ++  DL ++  + L          ++SPD   +   S
Sbjct: 992  ISISISPDGRRLA-SASMDRTVKVW--DLMTSTHQTLNGHESYIYGVAFSPDGRLLASGS 1048

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                 +   +        + +    +   +   +S  G  +A +    +   I       
Sbjct: 1049 Y---DKTARIWDLTTGTHQTL-MGHDDYVYSVSFSADGRRLA-SGAKDKTVKIW--DVAT 1101

Query: 381  SQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               +  +  D ++++    P GR  +      GD   K++ +   G  +  + T  ++
Sbjct: 1102 GALQDTIQTDLHIESAVLLPDGRLAV------GDRLIKIWDL-ATGTMQQTLGTKNFS 1152



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 72/204 (35%), Gaps = 26/204 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ +  G        ++WD++                  K+  + +D ++Q++ G +   
Sbjct: 1251 GKWLVSGGGDDTESVKIWDLET-----------------KLWGSANDALHQTLKGHRHFI 1293

Query: 174  NSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            +            S     ++ + D    ++++     +  +    FSP+ +++A    D
Sbjct: 1294 HWLSFSPDMRQLASSSADRTIKIWDTATGSLQHTLEGHEWGVNIAVFSPDGRRLASGADD 1353

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                    L D         + +   +  +  FS++G+     +  D  + I+  D  + 
Sbjct: 1354 K----TFRLWDPATGTLQHILKHPTWLCRSVAFSADGRWLATGL--DRIIRIW--DPDTG 1405

Query: 293  ATERLTNTLFINISASYSPDSSQI 316
              +   +T     + ++S D + I
Sbjct: 1406 TLQHTIDTQKHIHNLAFSSDGNSI 1429


>gi|242094216|ref|XP_002437598.1| hypothetical protein SORBIDRAFT_10g030220 [Sorghum bicolor]
 gi|241915821|gb|EER88965.1| hypothetical protein SORBIDRAFT_10g030220 [Sorghum bicolor]
          Length = 769

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 84/245 (34%), Gaps = 54/245 (22%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF--SSNGKRAL 273
            P  S +  K+A+   + +    V++ D              + + +  +    +     
Sbjct: 417 FPTVSSDGSKLAFVDNEFK---AVWVADEPRGLRVVWEWRRPNSVFSTAWNHDPDKDVLY 473

Query: 274 ISV----QKDEAMDIYSV-----DLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           + V      D  ++I+++     D       +LT   F N   S +P  ++IVF S ++ 
Sbjct: 474 VCVGPAFSADSRLEIHAIFNASGDESQRQLRKLTAGGFNNAFPSSNPAGTKIVFRSTKDA 533

Query: 325 KE---------QLYVM-QSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTK------- 365
                       LY+M  +   +   +++  D + +     WSP GD I F+        
Sbjct: 534 PPPPPGGFRQKNLYIMEDAMEGESAGVTRLTDGDWTDTHCQWSPSGDWIVFSSSRHKPDG 593

Query: 366 -------FSGEKFAIGVMKKDG--SQERLLVED------------SNLQAPTWSPSGRSL 404
                       F + ++      +  R++                ++  P +SP GRS+
Sbjct: 594 APKTDNFLDPGYFGVYLVNPASPKAVVRVMTSALPPPVPTNVAGLGHVNHPMFSPDGRSI 653

Query: 405 IFSRK 409
           + +  
Sbjct: 654 VVTAD 658



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 66/193 (34%), Gaps = 31/193 (16%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASY 309
           K +  FR   + P  SS+G +       +E   ++  D               ++ S ++
Sbjct: 406 KDVDVFRVSGVFPTVSSDGSKLAFV--DNEFKAVWVADEPRGLRVVWEWRRPNSVFSTAW 463

Query: 310 SPDSSQ--------IVFESDREGKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQ 357
           + D  +          F +D    E   +  ++G + +R    ++     + F P  +P 
Sbjct: 464 NHDPDKDVLYVCVGPAFSAD-SRLEIHAIFNASGDESQRQLRKLTAGGFNNAF-PSSNPA 521

Query: 358 GDLIAFTKFSG---------EKFAIGVMK-----KDGSQERLLVEDSNLQAPTWSPSGRS 403
           G  I F               +  + +M+     +     RL   D       WSPSG  
Sbjct: 522 GTKIVFRSTKDAPPPPPGGFRQKNLYIMEDAMEGESAGVTRLTDGDWTDTHCQWSPSGDW 581

Query: 404 LIFSRKKDGDTGS 416
           ++FS  +    G+
Sbjct: 582 IVFSSSRHKPDGA 594



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 48/148 (32%), Gaps = 30/148 (20%)

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--------- 372
           R     +Y       +  R++ D E     P  SP G  +A  KFS  K++         
Sbjct: 159 RTPWTVVYRTNLRTGETVRLTPDGEYDL-SPAVSPSGKRVAVAKFSDNKWSGEIEHLKTD 217

Query: 373 --IGVMKKDG---SQERLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSK------ 417
             + +M  D       + L + +    +   P+W      + F R  D            
Sbjct: 218 IVVMIMNVDRNAQGGGKPLDDRAVCIQDAGWPSWGSD-NVIFFHRAVDKKDDPDSDRLTP 276

Query: 418 ---LYSIDL-NGRNETLINTPAYASDPQ 441
              +Y  D+  GR E +     YA  P 
Sbjct: 277 HWGVYRYDIAAGRTEPVTPGNIYAMTPA 304



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/148 (12%), Positives = 48/148 (32%), Gaps = 33/148 (22%)

Query: 163 YQSITGEKGDFNSRILFVSES-----VVSGIIKNSLCVMD--RDGANI-RYLTPSRDQIL 214
           + +         ++I+F S          G  + +L +M+   +G +         D   
Sbjct: 511 FNNAFPSSNPAGTKIVFRSTKDAPPPPPGGFRQKNLYIMEDAMEGESAGVTRLTDGDWTD 570

Query: 215 FEPRFSPNQQKVAYATYDDE-------------DILRVYLMDTRIDRAPKRIGNFR---- 257
              ++SP+   + +++   +                 VYL++    +A  R+        
Sbjct: 571 THCQWSPSGDWIVFSSSRHKPDGAPKTDNFLDPGYFGVYLVNPASPKAVVRVMTSALPPP 630

Query: 258 --------SMILAPRFSSNGKRALISVQ 277
                     +  P FS +G+  +++  
Sbjct: 631 VPTNVAGLGHVNHPMFSPDGRSIVVTAD 658



 Score = 37.3 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 29/60 (48%), Gaps = 2/60 (3%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSN 334
           ++     +Y  +L++  T RLT     ++S + SP   ++     SD +   ++  ++++
Sbjct: 158 RRTPWTVVYRTNLRTGETVRLTPDGEYDLSPAVSPSGKRVAVAKFSDNKWSGEIEHLKTD 217


>gi|186686180|ref|YP_001869376.1| hypothetical protein Npun_F6147 [Nostoc punctiforme PCC 73102]
 gi|186468632|gb|ACC84433.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1174

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 86/244 (35%), Gaps = 13/244 (5%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S  + SG    ++ + D     +          ++   F P  Q    A+   +    + 
Sbjct: 854  SNYLASGHEDQTIKLWDIKNGTLVQTLREHTNRVWSVAFQPASQHPLLASGSAD--YSIK 911

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTN 299
            L D ++    + +    S +    FS +G++   S   D+ + ++  D+ +    +    
Sbjct: 912  LWDWKLGTCLQTLHGHTSWVWTVVFSPDGRQLA-SSSYDQTVKLW--DINTGECLKTFKG 968

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 +S ++SPD   +   S+ +G   + +   +  + ++       S +   +SP G 
Sbjct: 969  HNSPVVSVAFSPDGQLLA-SSEFDG--MIKLWNIDTGECRQTLTGHTNSVWSVTFSPNGQ 1025

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             +  T F      + ++      +  +     +    +SP  + ++       D   KL+
Sbjct: 1026 WLLSTSFD-RTLKLWLVSTGKCLQTFVGHQDPVMVAQFSPDAQFIV---SGSVDRNLKLW 1081

Query: 420  SIDL 423
             I  
Sbjct: 1082 HIST 1085



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 87/255 (34%), Gaps = 18/255 (7%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F+S   +++ S   G     + + D                 +   FSP+ + +A A+ 
Sbjct: 553 AFSSDGQYLATSDTKG----DIQIWDVSTVKQLVRCRGHQHWAWSVAFSPDGRYLASASD 608

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ- 290
           D      V L D    +           + A  FS  G   + S  +D ++ ++ V  + 
Sbjct: 609 D----YLVKLWDVETGQCLHTYQGHTYSVNAVAFSPKGN-IVASCGQDLSIRLWEVAPEK 663

Query: 291 -SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +   + L        + ++ P+   +   S+      + +      +   + Q  +   
Sbjct: 664 LNPEVQTLVGHEGRVWAIAFHPNGKILASCSE---DYTIRLWDVATGNCFCVWQGHDRWL 720

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               +SP G L+A   +      +  +K     + L      + A  +SP+G+ L  S  
Sbjct: 721 RSITFSPDGKLLASGSYDNT-IKLWDVKSQKCLQTLRGHRQTVTAIAFSPNGQQLASSS- 778

Query: 410 KDGDTGSKLYSIDLN 424
              D   KL+ +  N
Sbjct: 779 --FDRTVKLWDVSGN 791



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 61/402 (15%), Positives = 125/402 (31%), Gaps = 92/402 (22%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQII---GKKFFSSPASWRKIAHTISD---------- 160
           GR +    D   V  +LWDV+  + +    G  +  +  ++    + ++           
Sbjct: 600 GRYLASASDDYLV--KLWDVETGQCLHTYQGHTYSVNAVAFSPKGNIVASCGQDLSIRLW 657

Query: 161 -----DIYQSITGEKGDFNSRILFVSESVVSG-----IIKNSLCVMDRDGANIRYLTPSR 210
                 +   +    G    R+  ++               ++ + D    N   +    
Sbjct: 658 EVAPEKLNPEVQTLVG-HEGRVWAIAFHPNGKILASCSEDYTIRLWDVATGNCFCVWQGH 716

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D+ L    FSP+ + +A  +YD+     + L D +  +  + +   R  + A  FS NG+
Sbjct: 717 DRWLRSITFSPDGKLLASGSYDN----TIKLWDVKSQKCLQTLRGHRQTVTAIAFSPNGQ 772

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LY 329
           +   S   D  + ++  D+  N  +          S +Y P+  Q+V      G +    
Sbjct: 773 QLA-SSSFDRTVKLW--DVSGNCLKTFLGHSSRLWSVAYHPNEQQLV----SGGDDHATK 825

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---------------------FSG 368
           +         +  +    S      SP  + +A                         + 
Sbjct: 826 LWNLQIGRCTKTLKGHTNSVLSLAPSPDSNYLASGHEDQTIKLWDIKNGTLVQTLREHTN 885

Query: 369 EKFAIGVMKKD---------------------GSQERLLV-EDSNLQAPTWSPSGRSLIF 406
             +++                           G+  + L    S +    +SP GR L  
Sbjct: 886 RVWSVAFQPASQHPLLASGSADYSIKLWDWKLGTCLQTLHGHTSWVWTVVFSPDGRQLAS 945

Query: 407 SRKKDGDTGSKLYSIDLN-------GRNETLINTPAYASDPQ 441
           S     D   KL+ I+         G N  +++  A++ D Q
Sbjct: 946 SSY---DQTVKLWDINTGECLKTFKGHNSPVVSV-AFSPDGQ 983



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 74/236 (31%), Gaps = 16/236 (6%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              ++      G N+  L       L    FS     +A       +        T +  
Sbjct: 482 RHQTVVQTGYAGGNLLNLFSYLQTDLSSFDFSH----LAIRQAYLANTTLHNTNFTNVKI 537

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISA 307
                      +L+  FSS+G+    S   D   DI   D+ +     R         S 
Sbjct: 538 RETVFAETFGGVLSVAFSSDGQYLATS---DTKGDIQIWDVSTVKQLVRCRGHQHWAWSV 594

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD   +   SD      + +            Q    S     +SP+G+++A     
Sbjct: 595 AFSPDGRYLASASD---DYLVKLWDVETGQCLHTYQGHTYSVNAVAFSPKGNIVASCGQD 651

Query: 368 G--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                + +   K +   + L+  +  + A  + P+G+ L        D   +L+ +
Sbjct: 652 LSIRLWEVAPEKLNPEVQTLVGHEGRVWAIAFHPNGKILA---SCSEDYTIRLWDV 704


>gi|291568163|dbj|BAI90435.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 1194

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 66/300 (22%), Positives = 119/300 (39%), Gaps = 41/300 (13%)

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           KQ + + FF +    R +AH   D +   +T     F+    +++ S       N++ + 
Sbjct: 552 KQTVSRAFFRADEFNRIVAH---DHLIWRVT-----FSPDGEYIATSSND----NTIKLW 599

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+ G N+  +    +  +F+  FSP+ Q +A A+ D     +++ +D         +   
Sbjct: 600 DKRG-NLLQVFAGHEGDVFDVAFSPDGQFLASASLD--KTAKIWTVD---GNLVTTLSLH 653

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFIN-ISA-SYSPD 312
           ++ + A  FS +G+   I+ Q D+   ++    Q   +A   LT T   + + A ++SPD
Sbjct: 654 KNGVRAIAFSPDGQTIGIASQ-DKTAQLWRRGDQGWVDAYLHLTLTGHDDAVEAIAFSPD 712

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              I   S ++   +L+ +              +   +D V+SP G  I      G    
Sbjct: 713 GQNIA-TSSKDHTVKLWGID---GSLVNTFSGHQNPVWDVVFSPDGKTIVSGSNDGTA-- 766

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWS-----PSG---RSLIFSRKKDGDTGSKLYSIDLN 424
             V   DGS   L+    + +   WS     P     R  I     D     KL+ ID N
Sbjct: 767 -KVWGLDGS---LITTLPSQEGWVWSVAISPPDSIIRRLGIVFATADLANNIKLWDIDGN 822



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 87/282 (30%), Gaps = 51/282 (18%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +       D  +    FSP+ Q +A ++ D      V L               ++ +  
Sbjct: 693 LHLTLTGHDDAVEAIAFSPDGQNIATSSKDH----TVKLWGID-GSLVNTFSGHQNPVWD 747

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS-----QIV 317
             FS +GK  + S   D    ++ +D   +    L +      S + SP  S      IV
Sbjct: 748 VVFSPDGKTIV-SGSNDGTAKVWGLD--GSLITTLPSQEGWVWSVAISPPDSIIRRLGIV 804

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F    +    + +   +G+    + +  +   ++  +SP G  +A           G   
Sbjct: 805 FA-TADLANNIKLWDIDGNLLYTL-EGHQQQVWNVSFSPDGKTLASVSNDKTLRLWGFEH 862

Query: 378 KDGSQER-----------------LLVEDSNLQAPTWSPSGRSLIFSRKKDG-------- 412
              +  R                 ++    +     W P+G  L      DG        
Sbjct: 863 PSLTILRGHNRGILDAVFSEDDSFVVTGSDDKTLRIWRPNGELLQTIPTSDGGVLSVSVA 922

Query: 413 -----------DTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
                      D   +L+ I  +G N TL+NT    + P W 
Sbjct: 923 SQYQILATGSYDQIIQLWQISPDGTNITLLNTLTEHTGPVWS 964



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 92/252 (36%), Gaps = 17/252 (6%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VV+G    +L +   +G  ++ +  S   +L     S   Q +A  +YD    L     D
Sbjct: 887  VVTGSDDKTLRIWRPNGELLQTIPTSDGGVLSVSVAS-QYQILATGSYDQIIQLWQISPD 945

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                     +      + +  FS NG+  + S   D  + ++  +      +  ++    
Sbjct: 946  GTNITLLNTLTEHTGPVWSVAFSPNGEFLV-SGSGDSTIKLW--NKDGVLLKSWSSQGQT 1002

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              + + S D+  I   S   G   + +   +GS ++ +S     +     +SP G  +  
Sbjct: 1003 IRTIAISRDNQLIA--SGGSGGM-VKIWGVDGSLKRELSPYHRGTILGLDFSPDGRFLV- 1058

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               + E   + +   +G+       D N      T+SP  + L        D  +K++S 
Sbjct: 1059 --SAAEDDMVMLWDINGNLINDFKADHNDIVSDVTFSPDSQILA---TAGTDGSAKIWS- 1112

Query: 422  DLNGRNETLINT 433
             L+G N  + N 
Sbjct: 1113 -LDGENLAIFNG 1123


>gi|309791402|ref|ZP_07685909.1| WD-40 repeat-containing protein [Oscillochloris trichoides DG6]
 gi|308226535|gb|EFO80256.1| WD-40 repeat-containing protein [Oscillochloris trichoides DG6]
          Length = 1196

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 84/292 (28%), Gaps = 27/292 (9%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSP----ASWRKIAHTIS---DDIYQS--ITGEKGDFNSRI 177
              R+WDV   +++      S      A     A  IS   D   +   +    G     +
Sbjct: 820  SIRIWDVAAGQELFSLHDHSGAVFRIAFTPDSAGLISAGYDRSIRRWDLPMVHGQAVYGV 879

Query: 178  LFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
             +  +    VS      L V D     + +   + +  L  P FSP+ Q +         
Sbjct: 880  AYSPDGRMIVSTANGKDLKVWDATSQALLHTFTTDEYYLINPTFSPDGQSI---AAAGAS 936

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                      +  AP+ I        A  +S +G     S            DL      
Sbjct: 937  GSAYLWSLADMQAAPRTIMAHPGGCYAVAWSPDGNFVATSGVDTSVRVWAVADLA--IQR 994

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             LT       S S+S D   +   S  +    L +             D   +     WS
Sbjct: 995  ELTAEAGQITSVSWSADGQFLAAASQND----LLIWNVTAGILIP-KPDTFTNAKAVAWS 1049

Query: 356  PQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            P G  +A          + I    +D ++  L    S  +   +S  G  ++
Sbjct: 1050 PHGLRLAVVWQNQPPTVYNI----EDETKVVLEQNPSGAERIHFSADGNRVV 1097



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 79/252 (31%), Gaps = 20/252 (7%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            + V D                + +  F+PN   +A A+ D      + + D    +    
Sbjct: 779  IHVWDVASGREERTLFGHSNSILQLAFAPNGAFLASASSDT----SIRIWDVAAGQELFS 834

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            + +    +    F+ +    LIS   D ++  + + +                  +YSPD
Sbjct: 835  LHDHSGAVFRIAFTPD-SAGLISAGYDRSIRRWDLPMVHGQAV---------YGVAYSPD 884

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               IV  S   GK+ L V  +            E    +P +SP G  IA    SG  + 
Sbjct: 885  GRMIV--STANGKD-LKVWDATSQALLHTFTTDEYYLINPTFSPDGQSIAAAGASGSAYL 941

Query: 373  IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              +     +   ++       A  WSP G    F      DT  +++++        L  
Sbjct: 942  WSLADMQAAPRTIMAHPGGCYAVAWSPDGN---FVATSGVDTSVRVWAVADLAIQRELTA 998

Query: 433  TPAYASDPQWVG 444
                 +   W  
Sbjct: 999  EAGQITSVSWSA 1010



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 93/318 (29%), Gaps = 47/318 (14%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
              +WDV   ++   +  F             S+ I Q      G F            S 
Sbjct: 779  IHVWDVASGRE--ERTLFGH-----------SNSILQLAFAPNGAFL----------ASA 815

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                S+ + D       +        +F   F+P+   +  A YD            R  
Sbjct: 816  SSDTSIRIWDVAAGQELFSLHDHSGAVFRIAFTPDSAGLISAGYDRS---------IRRW 866

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINIS 306
              P         +    +S +G+  + +       D+   D  S A     T   +  I+
Sbjct: 867  DLPMV---HGQAVYGVAYSPDGRMIVSTAN---GKDLKVWDATSQALLHTFTTDEYYLIN 920

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             ++SPD   I   +            ++     R         +   WSP G+ +A +  
Sbjct: 921  PTFSPDGQSI--AAAGASGSAYLWSLADMQAAPRTIMAHPGGCYAVAWSPDGNFVATSGV 978

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                    V      +E L  E   + + +WS  G+ L  + + D      ++++   G 
Sbjct: 979  DTSVRVWAVADLAIQRE-LTAEAGQITSVSWSADGQFLAAASQND----LLIWNVTA-GI 1032

Query: 427  NETLINTPAYASDPQWVG 444
                 +T   A    W  
Sbjct: 1033 LIPKPDTFTNAKAVAWSP 1050



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 89/253 (35%), Gaps = 29/253 (11%)

Query: 182 ESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ES+V       +     DG+N     T +         FSP+ + VA +  D        
Sbjct: 590 ESIVGTTFDGEVLRWPNDGSNLPLQRTATHTGSTNGIAFSPDGRFVATSGGDS------- 642

Query: 241 LMDTRIDRAPKRIGNFRSMILAP------RFSSNGKRALISVQKDEAMDIYSV-DLQSNA 293
               R+   P+      SM+ +P      RFS +G+  L+S    +   IY +     + 
Sbjct: 643 --AIRLWSFPEMTLLRTSMVYSPTLLAQIRFSPDGQ--LLSANSYDDSTIYLLKTADLSL 698

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ----SNGSDQKRISQDKEASY 349
                    +  +  +SPD   +   +  +G  +++           +Q+R         
Sbjct: 699 ATPPLVHPDLVNALDFSPDGRWLA-TAGNDGVARIWETSSGALVAELEQRRNLDGTSYPL 757

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSR 408
           +   +SP    +  T        +  +   G +ER L   SN +    ++P+G  L  + 
Sbjct: 758 YSIAFSPTQSNLLVTSGQDALIHVWDV-ASGREERTLFGHSNSILQLAFAPNGAFLASAS 816

Query: 409 KKDGDTGSKLYSI 421
               DT  +++ +
Sbjct: 817 S---DTSIRIWDV 826



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 35/99 (35%), Gaps = 10/99 (10%)

Query: 326 EQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE- 383
            ++  +      + R+    E     D   SP G+ I  T F GE         DGS   
Sbjct: 556 PEIRQILQQTVQEARLRWVMETPDLVDVALSPDGESIVGTTFDGEVLR---WPNDGSNLP 612

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             R      +     +SP GR   F     GD+  +L+S
Sbjct: 613 LQRTATHTGSTNGIAFSPDGR---FVATSGGDSAIRLWS 648


>gi|193214091|ref|YP_001995290.1| peptidase S41 [Chloroherpeton thalassium ATCC 35110]
 gi|193087568|gb|ACF12843.1| peptidase S41 [Chloroherpeton thalassium ATCC 35110]
          Length = 1062

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 65/191 (34%), Gaps = 29/191 (15%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +   + D    +++V+       RLT  L      S SPD   I F S  EG+  +Y+M
Sbjct: 21  IVFVSEDD----LWTVEASGGVARRLTAGLAECAFPSVSPDGKFIAFVSSEEGQPDVYLM 76

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----AIGVMKKDGSQERLLV 387
              G   KR++           W   G  I F+  + + F    A+  +  +G +     
Sbjct: 77  PILGGQPKRLTYLGATGTRVIGWH-DGK-IIFSTNAKQPFLNIQAVYALSPEGGEP---- 130

Query: 388 EDSNLQAPTWSPSG--RSLI----------FSRKKDGDTGSKLYSIDLNGRNETL---IN 432
           E       T+   G    ++          + R + G  G   ++   N   E     + 
Sbjct: 131 EPFAFGTATYLSFGAENQIVLGRNSADAARWKRYRGGTAGEIWWARSANEPFENFSKKLG 190

Query: 433 TPAYASDPQWV 443
                + P W+
Sbjct: 191 LKGNFNSPIWI 201



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 60/196 (30%), Gaps = 28/196 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +R+    +    P  S +GK       ++   D+Y + +     +RLT       
Sbjct: 35  SGGVARRLTAGLAECAFPSVSPDGKFIAFVSSEEGQPDVYLMPILGGQPKRLTYLGATGT 94

Query: 306 SASYSPDSSQIVFESDREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D  +I+F ++ +      + +Y +   G + +  +                + I
Sbjct: 95  RVIGWHDG-KIIFSTNAKQPFLNIQAVYALSPEGGEPEPFAFGTATYLSFGA----ENQI 149

Query: 362 AFTKFSGEKFAIGVMKKDGSQE---------------RLLVEDSNLQAPTWSP-SG-RSL 404
              + S +       +   + E               + L    N  +P W   +G   +
Sbjct: 150 VLGRNSADAARWKRYRGGTAGEIWWARSANEPFENFSKKLGLKGNFNSPIWIQENGAARI 209

Query: 405 IFSRKKDGDTGSKLYS 420
            F    DG   + LYS
Sbjct: 210 YFVSDHDG--VANLYS 223



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 69/182 (37%), Gaps = 14/182 (7%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASY---SPDSSQIVFESDRE 323
           +G+   ++   D A D   +++ +    ++ +    +I  A +   +P +  +   ++R 
Sbjct: 347 DGEHVAMTS--DAADDQEILEIYNGDNVQVHSFEHFDIGIARFLQPNPKNKLLAVGNNR- 403

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQ 382
              +L ++  +      I Q+   +  +  WSP G  +A++   S E+  I +      +
Sbjct: 404 --NELKLIDIDNETAVLIEQNSFGAIGEADWSPCGRYLAYSSPISMEQTEIKIYDTKTGK 461

Query: 383 ERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYAS 438
              + E       P +S  G+ L F   +  D        DLN   G    L+      +
Sbjct: 462 THPVTEPVLRDYCPAFSVDGKYLYFLSDRIFDPVYDNLLFDLNFPRGTKPYLLTLQKDLT 521

Query: 439 DP 440
            P
Sbjct: 522 SP 523



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 97/281 (34%), Gaps = 39/281 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            Q        F + I+FVSE          L  ++  G   R LT    +    P  SP+
Sbjct: 7   VQGYYRHPSVFENAIVFVSED--------DLWTVEASGGVARRLTAGLAE-CAFPSVSPD 57

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A+ + ++     VYLM     +  +      +      +  +GK    +  K   +
Sbjct: 58  GKFIAFVSSEEGQP-DVYLMPILGGQPKRLTYLGATGTRVIGWH-DGKIIFSTNAKQPFL 115

Query: 283 DI---YSVDLQSNATERLTNTLFINIS---------ASYSPDSSQIVFESDREGK-EQLY 329
           +I   Y++  +    E         +S            S D+++  ++  R G   +++
Sbjct: 116 NIQAVYALSPEGGEPEPFAFGTATYLSFGAENQIVLGRNSADAAR--WKRYRGGTAGEIW 173

Query: 330 VMQSNGSDQKRISQ--DKEASYFDPVWSPQGD--LIAFTKFSGEKFAIGVMKKDGSQERL 385
             +S     +  S+    + ++  P+W  +     I F         +     D +  + 
Sbjct: 174 WARSANEPFENFSKKLGLKGNFNSPIWIQENGAARIYFVSDHDGVANLYSALPDATDLKR 233

Query: 386 LVE--DSNLQAPTWSPSGR-SLIFSRKKDGDTGSKLYSIDL 423
                D  ++ P    SG+  +++        G+ ++  D+
Sbjct: 234 HTHHTDFYVRYPQKDASGKNRIVY------HAGADIFLYDI 268



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 7/128 (5%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G  +N L ++D D      +  +    + E  +SP  + +AY++    +   + + DT+ 
Sbjct: 400 GNNRNELKLIDIDNETAVLIEQNSFGAIGEADWSPCGRYLAYSSPISMEQTEIKIYDTKT 459

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQ---SNATERLTNTL 301
            +    +         P FS +GK       +  D   D    DL          LT   
Sbjct: 460 GK-THPVTEPVLRDYCPAFSVDGKYLYFLSDRIFDPVYDNLLFDLNFPRGTKPYLLTLQK 518

Query: 302 FINISASY 309
            +  S  +
Sbjct: 519 DL-TSPFF 525



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 3/126 (2%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            +G N++  +     I       PN +    A  ++ + L++  +D       ++  N  
Sbjct: 367 YNGDNVQVHSFEHFDIGIARFLQPNPKNKLLAVGNNRNELKLIDIDNETAVLIEQ--NSF 424

Query: 258 SMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             I    +S  G+    S     E  +I   D ++  T  +T  +  +   ++S D   +
Sbjct: 425 GAIGEADWSPCGRYLAYSSPISMEQTEIKIYDTKTGKTHPVTEPVLRDYCPAFSVDGKYL 484

Query: 317 VFESDR 322
            F SDR
Sbjct: 485 YFLSDR 490


>gi|170118529|ref|XP_001890441.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164634563|gb|EDQ98896.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1481

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 55/323 (17%), Positives = 102/323 (31%), Gaps = 43/323 (13%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIG--KKFFSSPASW------RKIA---HT 157
             V+        V        R+W+    + ++   K    S  S       R I    H 
Sbjct: 870  SVVCSPDGGHIVSGSSDTTIRVWNTLTGQSVMEPLKGHSGSVTSVAYSPCGRHIISGSHD 929

Query: 158  ISDDIYQSIT----------GEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYL 206
             +  I+ ++T           +KG           ++VSG    ++ + D   G +I  L
Sbjct: 930  CTVRIWDAVTGQCLMDPLIGHDKGVSCIAYSPNGMNIVSGSSDKTIRLWDALSGQSIMVL 989

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRF 265
                D       FSP+ + +  AT        +   +    +     + +    +    F
Sbjct: 990  FRGSDPFYTV-AFSPDGKHIVCAT----QCHIIRFWNALTSQCILSPLEDDEGSVFRVAF 1044

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDRE 323
            S NGK     + +     I   D  +  T+   +        S ++SPD   IV  S+  
Sbjct: 1045 SPNGKHI---LSRCGDNIIKVWDALTGHTKVDHVRGHEDAIRSVAFSPDGKHIVSGSN-- 1099

Query: 324  GKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                L +  +  G       +  +A      +SP G  IA             +    + 
Sbjct: 1100 -DATLRIWDALTGLSVMGPLRGHDAMVTSVAFSPDGRYIASGSHDCTVRVWDALTGQSAM 1158

Query: 383  ERLLVEDSNLQAPTWSPSGRSLI 405
            + L   D  + +  +SP G+ + 
Sbjct: 1159 DPLKGHDKGVISVAFSPDGKYIA 1181



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 91/250 (36%), Gaps = 25/250 (10%)

Query: 186  SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            SG    ++ V D   G +        D+ +    FSP+ + +A  ++D    +RV+   T
Sbjct: 1139 SGSHDCTVRVWDALTGQSAMDPLKGHDKGVISVAFSPDGKYIASGSWD--KTVRVWNALT 1196

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                    IG+    I +  FS +G+   IS  +D  +  ++     +    L       
Sbjct: 1197 GQSVVDPFIGHTH-WIHSVSFSPDGRFI-ISGSEDRTIRAWNALTGQSIMNPLIGHQGGI 1254

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++SPD   IV  S+ +   +++   +  S    +    +A      +SP G  I   
Sbjct: 1255 NSVAFSPDRRYIVSGSN-DRTVRVWEFNAGQSIMDPLKGHGDAVDSV-AFSPDGRYIVSG 1312

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDS-----NLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                    I +      Q   L +        +Q+  +SP GR +        D   +L+
Sbjct: 1313 SRDKT---IRLWNAVTGQS--LGDPFEGHHKGVQSVVFSPDGRHIA---SGSSDNTIRLW 1364

Query: 420  S-----IDLN 424
                  IDLN
Sbjct: 1365 DAYGGCIDLN 1374



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 95/305 (31%), Gaps = 42/305 (13%)

Query: 106  LGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS 159
             G   +VT  V      R           R+WD    +           A      H   
Sbjct: 1119 RGHDAMVT-SVAFSPDGRYIASGSHDCTVRVWDALTGQS----------AMDPLKGH--- 1164

Query: 160  DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPR 218
                     +KG  +       + + SG    ++ V +   G ++          +    
Sbjct: 1165 ---------DKGVISVAFSPDGKYIASGSWDKTVRVWNALTGQSVVDPFIGHTHWIHSVS 1215

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+ + +   + D    +R +   T        IG+   +  +  FS + +R ++S   
Sbjct: 1216 FSPDGRFIISGSED--RTIRAWNALTGQSIMNPLIGHQGGIN-SVAFSPD-RRYIVSGSN 1271

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D  + ++  +   +  + L        S ++SPD   IV  S     + + +  +     
Sbjct: 1272 DRTVRVWEFNAGQSIMDPLKGHGDAVDSVAFSPDGRYIVSGSR---DKTIRLWNAVTGQS 1328

Query: 339  KRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT- 396
                 +         V+SP G  IA          I +    G    L     ++  P+ 
Sbjct: 1329 LGDPFEGHHKGVQSVVFSPDGRHIASGSSDNT---IRLWDAYGGCIDLNPSAPSVTLPST 1385

Query: 397  WSPSG 401
            + PSG
Sbjct: 1386 FFPSG 1390



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 84/250 (33%), Gaps = 24/250 (9%)

Query: 186  SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G    ++ + D   G  +       D  +     SP+   +   + D      + + +T
Sbjct: 839  KGHAGYTIKIWDALTGQCVMGPLEGHDDRITSVVCSPDGGHIVSGSSDT----TIRVWNT 894

Query: 245  RIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTL 301
               ++  + +      + +  +S  G+   IS   D  + I+  D  +     + L    
Sbjct: 895  LTGQSVMEPLKGHSGSVTSVAYSPCGRHI-ISGSHDCTVRIW--DAVTGQCLMDPLIGHD 951

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  +YSP+   IV  S     + + +  +       +       ++   +SP G  I
Sbjct: 952  KGVSCIAYSPNGMNIVSGSS---DKTIRLWDALSGQSIMVLFRGSDPFYTVAFSPDGKHI 1008

Query: 362  AFTKFSGEKFAIGVMKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                       I       SQ     L  ++ ++    +SP+G+ ++    + GD   K+
Sbjct: 1009 VCATQC---HIIRFWNALTSQCILSPLEDDEGSVFRVAFSPNGKHIL---SRCGDNIIKV 1062

Query: 419  YSIDLNGRNE 428
            +   L G  +
Sbjct: 1063 WDA-LTGHTK 1071



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 64/215 (29%), Gaps = 32/215 (14%)

Query: 218  RFSPNQQKVA-----------------YATYDDEDILRVYLMDTRIDRAPK-RIGNFRSM 259
             +SP+ +++                     +       + + D    +     +      
Sbjct: 808  AYSPDGRRIVSGTYGAIHVWDALTGHDIMYFKGHAGYTIKIWDALTGQCVMGPLEGHDDR 867

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            I +   S +G   + S   D  + +++     +  E L        S +YSP    I+  
Sbjct: 868  ITSVVCSPDGGHIV-SGSSDTTIRVWNTLTGQSVMEPLKGHSGSVTSVAYSPCGRHIISG 926

Query: 320  SDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            S       + +  +          I  DK  S     +SP G  I           I + 
Sbjct: 927  SH---DCTVRIWDAVTGQCLMDPLIGHDKGVS--CIAYSPNGMNIVSGSSDKT---IRLW 978

Query: 377  K-KDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRK 409
                G    +L   S+      +SP G+ ++ + +
Sbjct: 979  DALSGQSIMVLFRGSDPFYTVAFSPDGKHIVCATQ 1013


>gi|83776065|dbj|BAE66184.1| unnamed protein product [Aspergillus oryzae]
          Length = 324

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 79/230 (34%), Gaps = 21/230 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    FSP+ Q +A  + D      + L D +     +      S +L+  
Sbjct: 32  QTHEGHSSSVLSVAFSPDGQTIASGSSDT----TIKLWDAKTGMELQTFKGHSSSVLSVA 87

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFES-DR 322
           FS +G+    S   D+ + ++  D +++   +        + S ++SPD   I   S DR
Sbjct: 88  FSPDGQTIA-SGSSDKTIKLW--DAKTDTELQTFKGHSDGVRSVAFSPDGQTIASGSYDR 144

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                + +       + +  +          +SP G  IA   +      I +       
Sbjct: 145 T----IKLWDPKTGTELQTFKGHSDGVRSVAFSPDGQTIASGSYDRT---IKLWDPKTGT 197

Query: 383 ERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           E    +  +   ++  +SP G+++        D   KL+        +TL
Sbjct: 198 ELQTFKGHSDGVRSVAFSPDGQTIASGSY---DKTIKLWDARTGTELQTL 244



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 85/253 (33%), Gaps = 21/253 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG    ++ + D                +    FSP+ Q +A  + D      + L
Sbjct: 51  QTIASGSSDTTIKLWDAKTGMELQTFKGHSSSVLSVAFSPDGQTIASGSSDK----TIKL 106

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D + D   +        + +  FS +G+    S   D  + ++  D ++    +     
Sbjct: 107 WDAKTDTELQTFKGHSDGVRSVAFSPDGQTIA-SGSYDRTIKLW--DPKTGTELQTFKGH 163

Query: 302 FINI-SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              + S ++SPD   I   S DR     + +       + +  +          +SP G 
Sbjct: 164 SDGVRSVAFSPDGQTIASGSYDRT----IKLWDPKTGTELQTFKGHSDGVRSVAFSPDGQ 219

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSK 417
            IA   +      I +       E   ++  +   ++  +S  G+++        D   K
Sbjct: 220 TIASGSYDKT---IKLWDARTGTELQTLKGHSDGVRSVAFSRDGQTIASGSY---DKTIK 273

Query: 418 LYSIDLNGRNETL 430
           L+        +TL
Sbjct: 274 LWDARTGTELQTL 286



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 15/193 (7%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDS 313
              S +L+  FS +G+    S   D  + ++  D ++    +       ++ S ++SPD 
Sbjct: 36  GHSSSVLSVAFSPDGQTIA-SGSSDTTIKLW--DAKTGMELQTFKGHSSSVLSVAFSPDG 92

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             I   S     + + +  +    + +  +          +SP G  IA   +      I
Sbjct: 93  QTIASGSS---DKTIKLWDAKTDTELQTFKGHSDGVRSVAFSPDGQTIASGSYDRT---I 146

Query: 374 GVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +       E    +  +   ++  +SP G+++        D   KL+        +T  
Sbjct: 147 KLWDPKTGTELQTFKGHSDGVRSVAFSPDGQTIASGSY---DRTIKLWDPKTGTELQTFK 203

Query: 432 NTPAYASDPQWVG 444
                     +  
Sbjct: 204 GHSDGVRSVAFSP 216



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 77/236 (32%), Gaps = 36/236 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ I  G     +  +LWD K   ++  + F       R +A   S D            
Sbjct: 92  GQTIASGSSDKTI--KLWDAKTDTEL--QTFKGHSDGVRSVA--FSPD------------ 133

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                   +++ SG    ++ + D                +    FSP+ Q +A  +YD 
Sbjct: 134 -------GQTIASGSYDRTIKLWDPKTGTELQTFKGHSDGVRSVAFSPDGQTIASGSYDR 186

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L D +     +        + +  FS +G+    S   D+ + ++  D ++  
Sbjct: 187 ----TIKLWDPKTGTELQTFKGHSDGVRSVAFSPDGQTIA-SGSYDKTIKLW--DARTGT 239

Query: 294 TER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             + L        S ++S D   I   S     + + +  +    + +  +    S
Sbjct: 240 ELQTLKGHSDGVRSVAFSRDGQTIASGSY---DKTIKLWDARTGTELQTLKGHSVS 292


>gi|220910143|ref|YP_002485454.1| WD-40 repeat-containing protein [Cyanothece sp. PCC 7425]
 gi|219866754|gb|ACL47093.1| WD-40 repeat protein [Cyanothece sp. PCC 7425]
          Length = 1193

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 79/206 (38%), Gaps = 15/206 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A    D      + +      R  K +    + +LA  FS +G+R   S  
Sbjct: 669 AFSPDGSLLASCGIDA----NIKIWLVSEGRLLKVLTGHSNGLLAVHFSPDGQRLA-SGG 723

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + I+  D+++ +    LT+      +A++S + + +V  S  +G  +++   +   
Sbjct: 724 YDTQIKIW--DIETGSCLYTLTDHENWIGAANFSSNGAMLVSASC-DGTVRIW--DTQNY 778

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               + +      +  VWS    LIA    +     I  ++       L   D  +    
Sbjct: 779 QCLEVLRGHTGWVWRAVWSRDDRLIASCS-ADRTLRIWDVETGTCLHTLKGHDHQIWGIA 837

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSID 422
           +SP  + L  + +   D   +L+ + 
Sbjct: 838 FSPDHQMLASASE---DQTIRLWQVS 860



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 64/218 (29%), Gaps = 17/218 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    FSP+ Q +A A+ D      V +      +    +        A  F
Sbjct: 615 TLKGHTNWIRRVVFSPDGQLLASASDDG----TVRIWQLSSGQCLHTLSISTGSEYAVAF 670

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G     S   D  + I+ V  +    + LT      ++  +SPD  ++         
Sbjct: 671 SPDGSLLA-SCGIDANIKIWLVS-EGRLLKVLTGHSNGLLAVHFSPDGQRLA---SGGYD 725

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--E 383
            Q+ +             D E       +S  G ++      G    + +      Q  E
Sbjct: 726 TQIKIWDIETGSCLYTLTDHENWIGAANFSSNGAMLVSASCDGT---VRIWDTQNYQCLE 782

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            L      +    WS   R +        D   +++ +
Sbjct: 783 VLRGHTGWVWRAVWSRDDRLIA---SCSADRTLRIWDV 817



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 93/254 (36%), Gaps = 20/254 (7%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S ++  G    ++ + D       +        ++   FSP+ Q +A +++D      V 
Sbjct: 926  STTIAGGSQDATIKLWDLKTGECSHTFTGHTDEVWSLAFSPDGQLLASSSFDH----TVK 981

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            L D  ++   + +   R  + A  FS  GK  L S   D  + ++  DLQ+     +   
Sbjct: 982  LWDLNLNECCQTLEGHRDRVAAVAFSPEGK-ILASGSDDCTIRLW--DLQAYRCINVLEG 1038

Query: 301  LFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                I   ++SP+ + +V  S     + L V      +  R  Q   +      +SP G 
Sbjct: 1039 HTARIGPIAFSPEGNLLVSPSL---DQTLKVWDMRTGECLRTLQGHSSWVMAASFSPDGQ 1095

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSK 417
             +A          + +      Q    L   SN   +  +S  G  L  + +   D   +
Sbjct: 1096 TLASASCDQT---VKIWDVSTGQCLTTLSGHSNWIWSVAFSQDGLLLASASE---DETIR 1149

Query: 418  LYSIDLNGRNETLI 431
            L+ +  +GR   ++
Sbjct: 1150 LWDL-GSGRCLRIL 1162



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 68/196 (34%), Gaps = 13/196 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSPN Q +A A  +      V+L      +    +    + I    FS +G+    S   
Sbjct: 586 FSPNGQTLATADTNGG----VHLWQLVDQQRLLTLKGHTNWIRRVVFSPDGQLLA-SASD 640

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + I+ +         L+ +     + ++SPD S +           + +   +    
Sbjct: 641 DGTVRIWQLS-SGQCLHTLSISTGSEYAVAFSPDGSLLASC---GIDANIKIWLVSEGRL 696

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-W 397
            ++            +SP G  +A +     +  I  ++  GS    L +  N      +
Sbjct: 697 LKVLTGHSNGLLAVHFSPDGQRLA-SGGYDTQIKIWDIET-GSCLYTLTDHENWIGAANF 754

Query: 398 SPSGRSLIFSRKKDGD 413
           S +G  L+ S   DG 
Sbjct: 755 SSNGAMLV-SASCDGT 769



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 82/224 (36%), Gaps = 22/224 (9%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                +L + D +     +     D  ++   FSP+ Q +A A+ D      + L      
Sbjct: 807  SADRTLRIWDVETGTCLHTLKGHDHQIWGIAFSPDHQMLASASEDQ----TIRLWQVSNG 862

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            +   RI  + + I A  FS N  + L S  +D ++ I+    +     +L  + F     
Sbjct: 863  QCMARIQGYTNWIKAVAFSPN-DQLLASGHRDRSLRIWD-RHRGECIRQL--SGFAEGLP 918

Query: 308  --SYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              ++ P+S+ I       G +   + +      +            +   +SP G L+A 
Sbjct: 919  AVAFHPNSTTIA-----GGSQDATIKLWDLKTGECSHTFTGHTDEVWSLAFSPDGQLLAS 973

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
            + F      + +   + ++    +E    +  A  +SP G+ L 
Sbjct: 974  SSFD---HTVKLWDLNLNECCQTLEGHRDRVAAVAFSPEGKILA 1014



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 62/172 (36%), Gaps = 17/172 (9%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSP 311
                 +LA  FS NG+    +           VD        LT            +SP
Sbjct: 575 TQAFGGMLAVDFSPNGQTLATADTNGGVHLWQLVD----QQRLLTLKGHTNWIRRVVFSP 630

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   +   SD +G  +++  Q +             S +   +SP G L+A +       
Sbjct: 631 DGQLLASASD-DGTVRIW--QLSSGQCLHTLSISTGSEYAVAFSPDGSLLA-SCGIDANI 686

Query: 372 AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDG-DTGSKLYSI 421
            I ++  +G   ++L   SN L A  +SP G+ L       G DT  K++ I
Sbjct: 687 KIWLVS-EGRLLKVLTGHSNGLLAVHFSPDGQRLA----SGGYDTQIKIWDI 733


>gi|298242356|ref|ZP_06966163.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297555410|gb|EFH89274.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 434

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 73/213 (34%), Gaps = 11/213 (5%)

Query: 194 CVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            V   D  ++R L        ++E  +SP    +A A  D      V + +T+  R+   
Sbjct: 218 TVRIWDAHSLRTLQVWHASDTIWEVSWSPGSDFLAAAINDG----TVNVWNTQSGRSAYT 273

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
               + ++ +  +S +G +   S   D  + I+ ++    A    T       + ++S D
Sbjct: 274 YRGHQDVVYSVAWSPDGGKIA-SGSWDHTVHIWDLNADH-AASIYTEHDNKVTAIAWSND 331

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S    F         + V  +     +++ ++         WSP G  I  +  +     
Sbjct: 332 S---AFIVSGSSDTTVQVWNAATGQTRQVYREHNGVIQAVAWSPDGRQIV-SSSADNTVK 387

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +    +  S    L E        WSP  + + 
Sbjct: 388 LWDPTRSTSIYTYLPEGLTPWTLAWSPDSKFVA 420



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 79/243 (32%), Gaps = 11/243 (4%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMIL 261
           +RY  P  +  +    +SP   ++A A    +     +++ D    +  +        + 
Sbjct: 140 LRYRYPGGEGSVGSVSWSPTSSRIASAAGPQDLKGGHIHVWDAFTGQNDQVYARHTKNVQ 199

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +GK    S   D  + I+  D  S  T ++ +        S+SP  S  +  + 
Sbjct: 200 TVAWSPDGKFLA-SAGSDNTVRIW--DAHSLRTLQVWHASDTIWEVSWSP-GSDFLAAAI 255

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +G   + V  +         +  +   +   WSP G  IA   +      I  +  D +
Sbjct: 256 NDGT--VNVWNTQSGRSAYTYRGHQDVVYSVAWSPDGGKIASGSWDHTV-HIWDLNADHA 312

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                  D+ + A  WS     ++       DT  ++++       +             
Sbjct: 313 ASIYTEHDNKVTAIAWSNDSAFIV---SGSSDTTVQVWNAATGQTRQVYREHNGVIQAVA 369

Query: 442 WVG 444
           W  
Sbjct: 370 WSP 372



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 85/268 (31%), Gaps = 18/268 (6%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
             S +    +    + V D        +     + +    +SP+ + +A  +   ++ +R
Sbjct: 163 IASAAGPQDLKGGHIHVWDAFTGQNDQVYARHTKNVQTVAWSPDGKFLA--SAGSDNTVR 220

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++   +       ++ +    I    +S  G   L +   D  +++++      +     
Sbjct: 221 IWDAHSL---RTLQVWHASDTIWEVSWSP-GSDFLAAAINDGTVNVWNTQ-SGRSAYTYR 275

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               +  S ++SPD  +I   S       +++   N      I  + +       WS   
Sbjct: 276 GHQDVVYSVAWSPDGGKIASGS---WDHTVHIWDLNADHAASIYTEHDNKVTAIAWSNDS 332

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             I           + V      Q R +    +  +QA  WSP GR ++ S     D   
Sbjct: 333 AFIVSGSSDTT---VQVWNAATGQTRQVYREHNGVIQAVAWSPDGRQIVSSS---ADNTV 386

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVG 444
           KL+    +    T +          W  
Sbjct: 387 KLWDPTRSTSIYTYLPEGLTPWTLAWSP 414



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 73/217 (33%), Gaps = 22/217 (10%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           ++ H  SD I++       DF            + I   ++ V +       Y       
Sbjct: 231 QVWH-ASDTIWEVSWSPGSDFL----------AAAINDGTVNVWNTQSGRSAYTYRGHQD 279

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +++   +SP+  K+A  ++D      V++ D   D A        + + A  +S++    
Sbjct: 280 VVYSVAWSPDGGKIASGSWDH----TVHIWDLNADHAASIYTEHDNKVTAIAWSNDS--- 332

Query: 273 LISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              V       +   +  +  T ++      +  + ++SPD  QIV  S       + + 
Sbjct: 333 AFIVSGSSDTTVQVWNAATGQTRQVYREHNGVIQAVAWSPDGRQIVSSS---ADNTVKLW 389

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
               S        +  + +   WSP    +A     G
Sbjct: 390 DPTRSTSIYTYLPEGLTPWTLAWSPDSKFVATGLLDG 426



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 57/185 (30%), Gaps = 11/185 (5%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERL-TN 299
            T I     R       + +  +S    R   +    +     I+  D  +   +++   
Sbjct: 134 HTGIGTLRYRYPGGEGSVGSVSWSPTSSRIASAAGPQDLKGGHIHVWDAFTGQNDQVYAR 193

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 + ++SPD     F +       + +  ++     ++    +  + +  WSP  D
Sbjct: 194 HTKNVQTVAWSPDGK---FLASAGSDNTVRIWDAHSLRTLQVWHASDTIW-EVSWSPGSD 249

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +A    +     +   +   S          + +  WSP G  +        D    ++
Sbjct: 250 FLA-AAINDGTVNVWNTQSGRSAYTYRGHQDVVYSVAWSPDGGKIASGSW---DHTVHIW 305

Query: 420 SIDLN 424
            ++ +
Sbjct: 306 DLNAD 310


>gi|265765565|ref|ZP_06093840.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263254949|gb|EEZ26383.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 478

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 57/331 (17%), Positives = 115/331 (34%), Gaps = 68/331 (20%)

Query: 147 SPASWRKIAHTISD-DIYQSITGEKGDFNSRILFVSESVVSGIIKNSL------------ 193
               W+K+    +  +I+  IT  +G   +R   + +++ +  I   L            
Sbjct: 87  PTKKWKKLLQKAAGKEIFIRITLLRGGKWTRYADIKDTISNEPIDEYLVYRLLYPGYELW 146

Query: 194 -----CVMDRDGANIRYLTPSRD---QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                   D  G     +  +R+   Q +    F+ N  +        +    +   + +
Sbjct: 147 NEMGIYQRDLTGYEETPIAENRNFGKQCINCHTFNQNSPETMMVHVRGKSGGTLICKNGK 206

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------DEAMDIYSVDL-------QS 291
           +++   +   F++      +  +G+    S+ +            I   DL        +
Sbjct: 207 VEKVNTKPEGFKNGGTYAAWHPSGRYIAFSMNEIQQFFHSSGQKPIEVSDLAADLIVYDT 266

Query: 292 NATERLTNT-----LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                LT++      ++    +++PD   + F      KE++  + S   D  RI  D E
Sbjct: 267 EKKTFLTDSLICGERYMETFPNWTPDGKTLYFCRGNAYKEKM-PLDSIRYDLCRIGFDPE 325

Query: 347 ASYFD-----------------PVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQ 382
           +  F                  P  SP G  + FT      F+I        ++  D  +
Sbjct: 326 SGKFSTPECVYRASEQGKSISFPRVSPDGKYLMFTLSDYGNFSIWHPESELCLLTMDTRE 385

Query: 383 ERLL--VEDSNLQAP-TWSPSGRSLIFSRKK 410
            RLL  V  +++++  TWS SGR  +FS K+
Sbjct: 386 IRLLNEVNSNDVESFHTWSSSGRWFVFSSKR 416


>gi|254425851|ref|ZP_05039568.1| caspase domain protein [Synechococcus sp. PCC 7335]
 gi|196188274|gb|EDX83239.1| caspase domain protein [Synechococcus sp. PCC 7335]
          Length = 1660

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 53/254 (20%), Positives = 95/254 (37%), Gaps = 18/254 (7%)

Query: 160  DDIYQSITGEKGDFNS-RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            + ++  + G +G  NS R     E++VS     S+ + + DG  I    P+ + ++    
Sbjct: 1338 NPLHTVLKGHQGYINSLRFDAAGETLVSAGQDGSIRLWNPDGRQIHE-YPAHEDLITAVN 1396

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP++Q +A  ++D      V L  T      + I      +    FS +    + S   
Sbjct: 1397 FSPDRQLIASTSFDK----TVKLWHTN-GSLSQIIRGHSGRVYGSAFSPSDDMIV-SASA 1450

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D    ++S   + +    L +     +  +++ +   IV          LY  Q +G+  
Sbjct: 1451 DGTAKLWS--TEGSLLVTLPHPGNEVVCVTFAQEGKTIV---SGTSNGSLYFWQPDGT-L 1504

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTW 397
             R+ +           SP G  +A          I V   DG     L E S      ++
Sbjct: 1505 VRVVKAHGNMILAFSLSPDGSKLATASQDRT---IKVWDIDGEPLNALPEQSGPAYNVSF 1561

Query: 398  SPSGRSLIFSRKKD 411
            SP G SL F+   +
Sbjct: 1562 SPDGSSLAFASSSN 1575



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 54/314 (17%), Positives = 117/314 (37%), Gaps = 24/314 (7%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G + K  +D ++      +++ +++   K+      +    AH  +D   +++       
Sbjct: 965  GEISKVCQDFIQASAIAREIQRQQEHQAKEDGVKALNLIAEAHLNADRQLEAL--ISSTK 1022

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATY 231
                L    +V   +   ++ V+     N++ L      + ++     SPN + +   + 
Sbjct: 1023 AGHKLQQLPTVSQHLRTETIQVLHHVCTNVQELNRLYGHEDVVTCVSISPNGELI--VSG 1080

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D    ++++            I      ++   FS++G++  +S  K+  + I+ +  + 
Sbjct: 1081 DLTGTIKLWQ---TTGTLLNTIAGHSEAVVNVAFSADGQQ-FVSASKNTTLKIWGI--EG 1134

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              T  LT    +N S S + D  QI+  SD  G   L+        Q  + Q  E +   
Sbjct: 1135 ELTHLLTCPDAVN-SLSLNTD-RQIIAASDSSGHLSLWRWD---GSQINLFQAHEDTAHR 1189

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKK 410
               SP    +A     G    I + + DG+ +      D  + +  +SP G++L      
Sbjct: 1190 VAISPDTQYLASASADGS---IKLWQLDGTLDNNWSGHDGLITSLCFSPDGQTLA---SA 1243

Query: 411  DGDTGSKLYSIDLN 424
              D   K + +D  
Sbjct: 1244 GADQTIKHWHLDGT 1257



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 53/154 (34%), Gaps = 10/154 (6%)

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                + +    +MILA   S +G +   +  +D  + ++  D+       L        +
Sbjct: 1502 GTLVRVVKAHGNMILAFSLSPDGSKLA-TASQDRTIKVW--DIDGEPLNALPEQSGPAYN 1558

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             S+SPD S + F S       +      G   + +    +       + PQ +L+A    
Sbjct: 1559 VSFSPDGSSLAFASS---SNVIQTWSLEGILTQSLI-CSQNPCVSVCFHPQCNLLAVGDT 1614

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
             G    I +M    +   L+    N     +S +
Sbjct: 1615 DG---LIHLMSWPLNLNDLVTHGDNWLQDYYSAN 1645



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 87/229 (37%), Gaps = 30/229 (13%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            L +   DG+ I  L  + +        SP+ Q +A A+ D    ++++ +D  +D     
Sbjct: 1167 LSLWRWDGSQI-NLFQAHEDTAHRVAISPDTQYLASASAD--GSIKLWQLDGTLDNNW-- 1221

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                  +I +  FS +G+    S   D+ +  + +D        L N    +I+A+    
Sbjct: 1222 -SGHDGLITSLCFSPDGQTLA-SAGADQTIKHWHLD--GTLITAL-NGHSNSITAAIFHT 1276

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA---------- 362
               ++  S  +   +++ M  +G+    I+  +E +  +   S    L+A          
Sbjct: 1277 ERPVIVSSSFDSTIKIWGM--DGTLHSTIAGHRE-TVSEITLSADNTLLASAGADRVIKL 1333

Query: 363  -------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                    T   G +  I  ++ D + E L+    +     W+P GR +
Sbjct: 1334 WYWQNPLHTVLKGHQGYINSLRFDAAGETLVSAGQDGSIRLWNPDGRQI 1382


>gi|157693638|ref|YP_001488100.1| peptidase [Bacillus pumilus SAFR-032]
 gi|157682396|gb|ABV63540.1| S9C subfamily peptidase [Bacillus pumilus SAFR-032]
          Length = 656

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 91/258 (35%), Gaps = 49/258 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNF---RSMILAPRFSSNG 269
           +  P +SP+ +K  +      D    Y +   + D   + +  +         P +S + 
Sbjct: 16  VSHPVYSPDGKKAVFTKVTVNDKKDDYNIHLWVRDEETEELSQWTFEEGKHYQPVWSKDS 75

Query: 270 KRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----------- 317
           ++    +QK  EA  +  +  +      LT   +      +S D + I            
Sbjct: 76  RQLAFILQKPKEAPQLALIQCEGGGVRTLTAIPYGVSHPVFSLDGAFIYAAVSLKPSESV 135

Query: 318 ----------F--------ESDREGKE-------QLYVMQSNGSDQKRISQDKEASYFDP 352
                     F            +G+        Q+ ++  +  + + ++   +  + + 
Sbjct: 136 HDEKKEERDEFAPAVYDDLTYKADGRGFLDGRFTQIILVNVHSGEIEAVTS-GQHHHVNH 194

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVM----KKDGSQERLLVEDSNLQAPTWSPSGRSLIFS- 407
             SP G  +A+ + + +K  I  +     +DG+ +++          +++P+G SL++  
Sbjct: 195 TLSPCGKWLAYIQSNPQKPYISDVCLRSLEDGTTKKITQSSGAYSTVSFAPNGESLVYIG 254

Query: 408 --RKKDGDTGSKLYSIDL 423
             R+    T   L+  DL
Sbjct: 255 HEREFQNATFPALWLYDL 272



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/311 (12%), Positives = 94/311 (30%), Gaps = 65/311 (20%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLT-PSRDQILFEPRFSPNQQKVAYATYDDE 234
           + +F   +V       ++ +  RD            +   ++P +S + +++A+     +
Sbjct: 27  KAVFTKVTVNDKKDDYNIHLWVRDEETEELSQWTFEEGKHYQPVWSKDSRQLAFILQKPK 86

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--------------------- 273
           +  ++ L+        + +      +  P FS +G                         
Sbjct: 87  EAPQLALIQCEGGG-VRTLTAIPYGVSHPVFSLDGAFIYAAVSLKPSESVHDEKKEERDE 145

Query: 274 --------ISVQKDEA-------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                   ++ + D           I  V++ S   E +T+    +++ + SP    + +
Sbjct: 146 FAPAVYDDLTYKADGRGFLDGRFTQIILVNVHSGEIEAVTSGQHHHVNHTLSPCGKWLAY 205

Query: 319 ESDREGKEQL---YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKF 371
                 K  +    +        K+I+Q    +Y    ++P G+ + +     +F    F
Sbjct: 206 IQSNPQKPYISDVCLRSLEDGTTKKITQ-SSGAYSTVSFAPNGESLVYIGHEREFQNATF 264

Query: 372 -AIGVMKKDGSQERLLVE----------------DSNLQAPTWSPSGRSLIFSRKKDGDT 414
            A+ +          L E                    Q P W+   +         G T
Sbjct: 265 PALWLYDLKEGNVVQLSEMLDMYVGNCMAGDSFMGEANQLPQWTKDSQGFYALVSDQGST 324

Query: 415 GSKLYSIDLNG 425
           G  +Y   + G
Sbjct: 325 G--IYYFSVEG 333



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 36/104 (34%), Gaps = 9/104 (8%)

Query: 348 SYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPS 400
           S   PV+SP G    FTK             + V  ++  +      E+     P WS  
Sbjct: 15  SVSHPVYSPDGKKAVFTKVTVNDKKDDYNIHLWVRDEETEELSQWTFEEGKHYQPVWSKD 74

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWV 443
            R L F  +K  +   +L  I   G    TL   P   S P + 
Sbjct: 75  SRQLAFILQKPKE-APQLALIQCEGGGVRTLTAIPYGVSHPVFS 117


>gi|71899908|ref|ZP_00682056.1| alanyl dipeptidyl peptidase [Xylella fastidiosa Ann-1]
 gi|71730348|gb|EAO32431.1| alanyl dipeptidyl peptidase [Xylella fastidiosa Ann-1]
          Length = 715

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 52/259 (20%), Positives = 85/259 (32%), Gaps = 39/259 (15%)

Query: 214 LFEPRFSPNQQKVAYA--TYDDEDI-----LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   + +A    D ++I     + V  +      AP R+      + AP FS
Sbjct: 62  VSSPELSPDGAVLVFAKRQMDAKNIKASTSVWVKWLQAGAPAAPVRLTPLGWDVSAPAFS 121

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y + +      +LTN      S   SP   ++VF +      
Sbjct: 122 RDGKAVYFLSAKSGSNQLYVLPVSGGTPRQLTNLAVDIDSYKLSPQGDRVVFSAS---VF 178

Query: 327 QLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDL----IAFTKFSGEKFA 372
           Q+     +           S    +  ++        W+  G      IA     G K  
Sbjct: 179 QVCGSDLSCTKRKLDEKKNSKASGVVFEQLFVRHWDTWN-DGRRNTLFIASLPRGGAKPV 237

Query: 373 IGVMK----KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDL 423
             V       DG                WSP G S++ S +  G      T   LY  D+
Sbjct: 238 SAVSAMSAMLDGDVPSKPF--GGADHFVWSPDGHSVVASIRVAGRQEPWSTNFDLYRFDV 295

Query: 424 NGRNETLINTPAYASDPQW 442
           +G +         A++P W
Sbjct: 296 SGHD---TPVNLTAANPAW 311



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 70/221 (31%), Gaps = 13/221 (5%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQ 223
                D +S +  +  +           L   D  G +    LT +       P FS + 
Sbjct: 262 FVWSPDGHSVVASIRVAGRQEPWSTNFDLYRFDVSGHDTPVNLTAANPAWDATPMFSADG 321

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + + Y          D   +  M+ +  +  +   ++         S++GK   ++    
Sbjct: 322 KMLYYRAMRRPGFEADRFGLMEMEVQSGKVREIAPHWDRSADEIALSADGKALYVNADDH 381

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQ 338
               ++ VD+ S   E+      ++     +     + F  +  +  +Q++V  +     
Sbjct: 382 GEHPLFKVDIVSGKVEKWVGEGSVHA-PVLA--GETLAFMRNSLKSADQIFVTNAAARAP 438

Query: 339 -KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
              I+        D  W    +  +F  ++ E     V+K 
Sbjct: 439 LHAITSATGEVLQDVRWG-DFEQFSFKGWNDETVHGYVVKP 478


>gi|307326979|ref|ZP_07606169.1| WD40 repeat, subgroup [Streptomyces violaceusniger Tu 4113]
 gi|306887277|gb|EFN18273.1| WD40 repeat, subgroup [Streptomyces violaceusniger Tu 4113]
          Length = 1337

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 102/300 (34%), Gaps = 23/300 (7%)

Query: 160 DDIYQSITGEKGDF-------NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           D +++ +  E   F       ++++   +  +          ++    A +         
Sbjct: 629 DAVFEQVVTEADRFQYTDPSLSAQLALAAHRLRPDDEATKNRLLSVVNAPLATPLHGHTG 688

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            ++   FSPN + +A A+YD    L      TR     K +    S + +  FS +G+  
Sbjct: 689 AVYLTTFSPNGRLLATASYDRTVRLWDVSDRTRPKPLGKPLTGHTSWVSSAVFSPDGRTL 748

Query: 273 LISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
             S   D  + ++ V    +       L++        ++SPD   +   +  +   +L+
Sbjct: 749 A-SAGDDGTVRLWDVRNPGHPRPIGAPLSHHDGTIYLLAFSPDGRTLA-TATEDRVVRLW 806

Query: 330 VMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
            M   G  +         A+     +SP G  +A          +  M       R+   
Sbjct: 807 DMSRPGRPRPLGALTGHTAAVRSVAFSPDGRTLA-AGGDNGTIRLWNMADPRHPRRIETV 865

Query: 388 ---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWV 443
                  + +  +SP GR+L        D   +L+++  + R    + +P    + P W 
Sbjct: 866 LTGHKDLVHSVAFSPDGRTLA---SGSADNTVRLWNV-GDPRRAEPLGSPLTGHTGPIWS 921



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 54/311 (17%), Positives = 104/311 (33%), Gaps = 28/311 (9%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            D   +      S+ + W      +SD  Y S  GE    +S  ++       G    +L 
Sbjct: 927  DGSMLAAASQDSTASLW-----NVSDPEYPSQVGEPLAGSSGEMYALGFSPDG---RTLA 978

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
                D     +  P+ D +     F P+ + +A A  D++  L      +R     K   
Sbjct: 979  TGTGDNTVRLWSLPTSDMVGRSGAFRPDGRVLATAGRDEKVRLWNVEKPSRPVPLGKPFS 1038

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-----DLQSNATERLTNTLFINISASY 309
                 I    FS +G    + +  D  + +++V      +       L       +   +
Sbjct: 1039 PGEGAIRELTFSPDGHTLAM-MTGDREVRLWNVTDPAHPVAYKPPVPLRTRFAGALG--F 1095

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAFTKF 366
            SPD   +   +  +   QL+ +  + S  +R+       +      V+SP G  +A    
Sbjct: 1096 SPDGRVMA-TAYNDDTIQLWNVS-DLSHVRRLGAPLTGHKGYVNTLVFSPNGHTLASGSA 1153

Query: 367  SGEKFAIGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                    V     +     R+      + A  +SP GR+L        D   +L+++  
Sbjct: 1154 DNTIRLWNVTDPRHTVQAGPRVTGHLGPVNALAYSPDGRTLASGSD---DNTVRLWNV-T 1209

Query: 424  NGRNETLINTP 434
            +    T + +P
Sbjct: 1210 DPSKATRLRSP 1220



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 75/226 (33%), Gaps = 22/226 (9%)

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             I  +      ++    FSP+ + +A  + D+   L       R +     +      I 
Sbjct: 861  RIETVLTGHKDLVHSVAFSPDGRTLASGSADNTVRLWNVGDPRRAEPLGSPLTGHTGPIW 920

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSPDSSQIVFE 319
            +  FS +G     + Q   A      D +  S   E L  +     +  +SPD   +   
Sbjct: 921  SVSFSPDGSMLAAASQDSTASLWNVSDPEYPSQVGEPLAGSSGEMYALGFSPDGRTLA-- 978

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                G   + +     SD                + P G ++A T    EK  +  ++K 
Sbjct: 979  -TGTGDNTVRLWSLPTSDMVG---------RSGAFRPDGRVLA-TAGRDEKVRLWNVEKP 1027

Query: 380  GSQERL----LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 L       +  ++  T+SP G +L       GD   +L+++
Sbjct: 1028 SRPVPLGKPFSPGEGAIRELTFSPDGHTLA---MMTGDREVRLWNV 1070



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 55/296 (18%), Positives = 98/296 (33%), Gaps = 48/296 (16%)

Query: 114  GRVIKEGKDRLRVEFRLWDV--KDRKQIIGKKFFSSPASWRKI-----AHTIS------- 159
            GRV+       +V  RLW+V    R   +GK F     + R++      HT++       
Sbjct: 1007 GRVLATAGRDEKV--RLWNVEKPSRPVPLGKPFSPGEGAIRELTFSPDGHTLAMMTGDRE 1064

Query: 160  -------DDIYQSITGEKGDFNSRILFVSESVVSGII------KNSLCVMD-RDGANIRY 205
                   D  +           +R          G +       +++ + +  D +++R 
Sbjct: 1065 VRLWNVTDPAHPVAYKPPVPLRTRFAGALGFSPDGRVMATAYNDDTIQLWNVSDLSHVRR 1124

Query: 206  L---TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            L          +    FSPN   +A  + D+   L          +A  R+      + A
Sbjct: 1125 LGAPLTGHKGYVNTLVFSPNGHTLASGSADNTIRLWNVTDPRHTVQAGPRVTGHLGPVNA 1184

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFE 319
              +S +G+    S   D  + +++V   S AT     LT      +S S+S D S +   
Sbjct: 1185 LAYSPDGRTLA-SGSDDNTVRLWNVTDPSKATRLRSPLTGHTDAIVSLSFSRDGSTLA-- 1241

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                G +    +         ++   +A       SP      F  FS     +GV
Sbjct: 1242 --SGGNDNTARLWD-------VTAPSKAKSIGQSLSPNAKTGNFLSFSRGNRMLGV 1288


>gi|296114767|ref|ZP_06833417.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Gluconacetobacter hansenii ATCC 23769]
 gi|295978691|gb|EFG85419.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Gluconacetobacter hansenii ATCC 23769]
          Length = 718

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 86/258 (33%), Gaps = 48/258 (18%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----SSNGKRALIS----- 275
           ++A+    +       +M +   +AP+R+ ++ +      +    + +G+          
Sbjct: 73  RIAWV---ERRAGVRNIMISDHGQAPRRVTHYTTDDGTDLWGLTLTPDGRNLAYVEGGDP 129

Query: 276 -VQKDEAMDIYSVDLQSNATERLTNTLFINI------SASYSPDSSQIVFESDREGKEQL 328
               D   +          T  L      +       S ++SPD + + F   R G    
Sbjct: 130 EYPNDAPPNAGQATFAGKETVHLIGPSGRDSVMGEGHSPAFSPDGAFLAFS--RGGT--- 184

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
            +M  +       +     S     W+P G  +A     G    I +    G++  +L  
Sbjct: 185 -LMVGHTGGVPTAAFTTPGSITALRWAPDGRHVAVEIDRGSHGVIALWDV-GAKATVLTF 242

Query: 388 ---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK--------LYSIDL-NGRNETLINTPA 435
                SN + P +SP G+S+ F R +D   G+         ++  DL +G   T+   PA
Sbjct: 243 IPPALSNDRQPVFSPDGKSVAFMRTQDPILGTDPAKGRFWSVHVYDLASGHEHTVWTAPA 302

Query: 436 YASD---------PQWVG 444
                        P W  
Sbjct: 303 GKGSRFAAPEGSVPYWSA 320



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 80/251 (31%), Gaps = 37/251 (14%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P FSP+   +A++           LM       P         I A R++ +G+   +
Sbjct: 166 HSPAFSPDGAFLAFSRGGT-------LMVGHTGGVPTAAFTTPGSITALRWAPDGRHVAV 218

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTL---FINISASYSPDSSQIVFESDRE-------- 323
            + +     I   D+       LT        +    +SPD   + F   ++        
Sbjct: 219 EIDRGSHGVIALWDV-GAKATVLTFIPPALSNDRQPVFSPDGKSVAFMRTQDPILGTDPA 277

Query: 324 -GK-EQLYVMQSNGSDQKRISQD--KEASYFD------PVWSPQGDLIAFTKFSGEKFAI 373
            G+   ++V       +  +      + S F       P WS  G L+ F         I
Sbjct: 278 KGRFWSVHVYDLASGHEHTVWTAPAGKGSRFAAPEGSVPYWSADGRLL-FPWEGSGWMRI 336

Query: 374 G----VMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 M   G Q+    L  + + + A   S  G++L+++         + +S  + G 
Sbjct: 337 CALPMTMAGPGGQDTPECLTPDGAEVSAYQVSQDGKNLLYTSNTGDLDQWRAWSRPVAGT 396

Query: 427 NETLINTPAYA 437
              +  TP   
Sbjct: 397 GAAIALTPGND 407



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 64/202 (31%), Gaps = 35/202 (17%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY----SPDSSQIVFESDREGKE 326
           R     ++    +I   D    A  R+T+    + +  +    +PD   + +    EG +
Sbjct: 73  RIAWVERRAGVRNIMISDH-GQAPRRVTHYTTDDGTDLWGLTLTPDGRNLAYV---EGGD 128

Query: 327 QLYVMQSNGSDQKRISQDKE---------------ASYFDPVWSPQGDLIAFTKFSGEKF 371
             Y   +   +  + +   +                    P +SP G  +AF++      
Sbjct: 129 PEYPNDAP-PNAGQATFAGKETVHLIGPSGRDSVMGEGHSPAFSPDGAFLAFSR----GG 183

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            + V    G          ++ A  W+P GR +     +       L+ +       T I
Sbjct: 184 TLMVGHTGGVPTAAFTTPGSITALRWAPDGRHVAVEIDRGSHGVIALWDVGAKATVLTFI 243

Query: 432 N-------TPAYASDPQWVGFM 446
                    P ++ D + V FM
Sbjct: 244 PPALSNDRQPVFSPDGKSVAFM 265



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 69/249 (27%), Gaps = 29/249 (11%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G+ +S       + ++     +L V    G      T          R++P+ + VA   
Sbjct: 163 GEGHSPAFSPDGAFLAFSRGGTLMVGHTGGVPTAAFTTPGSITAL--RWAPDGRHVAVEI 220

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD----------E 280
                 +               I    S    P FS +GK       +D           
Sbjct: 221 DRGSHGVIALWDVGAKATVLTFIPPALSNDRQPVFSPDGKSVAFMRTQDPILGTDPAKGR 280

Query: 281 AMDIYSVDLQSNATERLTNTLFINIS---------ASYSPDSSQIVFESDREGKEQLYVM 331
              ++  DL S     +        S           +S D  +++F  +  G  ++  +
Sbjct: 281 FWSVHVYDLASGHEHTVWTAPAGKGSRFAAPEGSVPYWSADG-RLLFPWEGSGWMRICAL 339

Query: 332 Q-----SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQER 384
                   G D         A       S  G  + +T  +G  +++        G+   
Sbjct: 340 PMTMAGPGGQDTPECLTPDGAEVSAYQVSQDGKNLLYTSNTGDLDQWRAWSRPVAGTGAA 399

Query: 385 LLVEDSNLQ 393
           + +   N +
Sbjct: 400 IALTPGNDE 408


>gi|289670822|ref|ZP_06491897.1| dipeptidyl peptidase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 789

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 87/214 (40%), Gaps = 17/214 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-----RLT 298
            + +RA +   +      A  +S +G+   + ++  +  D +   +  +        RL+
Sbjct: 322 LKGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDLDKARLQPRHRLS 381

Query: 299 NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++ +I+   +   + PD+  +   S+  G  QLY ++ NG  ++R     +     PV S
Sbjct: 382 DSAWISWDFNDFGWLPDNRTLWLLSEESGYSQLYTVEGNGKPRQR--TRGQWEVSMPVPS 439

Query: 356 PQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  + F         + +  +     Q   +   + ++  + SP+G+ L+  R     
Sbjct: 440 ADGSGMFFMCNQKWPGDYEVCKLDLRSDQLTEVTALNGVEGFSLSPNGQQLL-VRYSGSY 498

Query: 414 TGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
             ++L  +   G   T++    TPA+ + P W+ 
Sbjct: 499 LPTQLAVVPATGSQATVLTDTRTPAFKAQP-WIA 531



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 51/298 (17%), Positives = 98/298 (32%), Gaps = 77/298 (25%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--S 258
           A+  ++ PS DQ      +  + ++V Y    D   +R     +      +R+ +     
Sbjct: 31  ADPDWIGPSVDQA----WWQWDGKQVQYLLKRDGSPVRDTYRQSTGGGTAERVADTARAG 86

Query: 259 MILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +  A P + +  +R L +   D    I+  DL++ A  +LT +  I     ++ D   I 
Sbjct: 87  LDAANPSYDATRQRMLFARNGD----IFLRDLRTGALTQLTRSNEIESYPQFASDGGAIW 142

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL--------IAFTKFSGE 369
               R G    Y  +++G   +      E     P   P+ D+        +A  +   E
Sbjct: 143 ----RAGNN-WYHWRADGGTAQVAVVKAERDPNAP---PKADVLREQQLATLATLRRDKE 194

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTW------------SPSGRSLIFSRK-------- 409
           +      ++D        + +   AP +            SP GR L+   +        
Sbjct: 195 QRDALRTQED---AWRRADTTRAAAPVYLGDEVEIVDSALSPDGRHLLVVTQAKNADEGQ 251

Query: 410 ------------------------KDGDTGSKLYSIDLN-GRNETLI--NTPAYASDP 440
                                   ++      L+ +D+  G  +TL     P  A+DP
Sbjct: 252 AGKMPKYVTESGYEEFQEVRTRVGRNAPAAHALWLVDVTSGTAKTLSFDPLPGIATDP 309



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 78/251 (31%), Gaps = 33/251 (13%)

Query: 130 LWDVKDRKQIIGKKFFSSP---------ASWRKIAHTISDDIYQSITGEK-GDFNSRILF 179
           L DV        K     P         A+ RK A   +    +++  E  GD +   + 
Sbjct: 286 LVDVTSG---TAKTLSFDPLPGIATDPLAALRKAAKREALKGNRAVRVESDGDGSGPAVH 342

Query: 180 VSESVVS------GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-------PNQQKV 226
            S+   +       +      +   D    R     R        +        P+ + +
Sbjct: 343 WSDDGRNVAVEIRAVDNKDRWIASVDLDKARLQPRHRLSDSAWISWDFNDFGWLPDNRTL 402

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDI 284
              + +        L     +  P++    +  +  P  S++G        +      ++
Sbjct: 403 WLLSEESG---YSQLYTVEGNGKPRQRTRGQWEVSMPVPSADGSGMFFMCNQKWPGDYEV 459

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQ 343
             +DL+S+    +T    +    S SP+  Q++          QL V+ + GS    ++ 
Sbjct: 460 CKLDLRSDQLTEVTALNGVEGF-SLSPNGQQLLVRYSGSYLPTQLAVVPATGSQATVLTD 518

Query: 344 DKEASYFDPVW 354
            +  ++    W
Sbjct: 519 TRTPAFKAQPW 529


>gi|111223027|ref|YP_713821.1| WD repeat-containing protein [Frankia alni ACN14a]
 gi|111150559|emb|CAJ62260.1| putative WD-repeat protein [Frankia alni ACN14a]
          Length = 1317

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 54/349 (15%), Positives = 110/349 (31%), Gaps = 38/349 (10%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD-VKD--RKQ 138
            IS D       + D   R  D      + ++TG              RLW+ V     + 
Sbjct: 918  ISPDGTLVATVSDDQTARLWDLAERSEKAVLTGH-----------SGRLWECVFSPDGQI 966

Query: 139  IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV--SGIIKNSLCVM 196
            +       +   W      + +    +     G       F ++S    +     ++   
Sbjct: 967  LATGGHDGTARLW-----NVCETTEHAALAGHGGAVRGCAFSADSRTLITVGHDQTIRAW 1021

Query: 197  DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
                A++R+    R   +    FSP+   +A +  +      V +M        +     
Sbjct: 1022 SVAAASLRFSVTGRTSRMNRCAFSPDGTLLAASMVNG----AVRVMQVSDRTEIRDFDGQ 1077

Query: 257  RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQ 315
               I    FS +G     +   D    ++ +  ++     RL        S ++SPD + 
Sbjct: 1078 AGGIRGCAFSPDGTLLATTGN-DGTTRLWEI--RTGEERLRLRGHTGWVRSCAFSPDGAL 1134

Query: 316  IVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +     DR  +    + Q        +    + +     +SP G ++A     G    + 
Sbjct: 1135 LATCGLDRTTR----LWQVTDGVLVAVLDGHQNTVHCCDFSPDGTVLATCSGDGMT-RLW 1189

Query: 375  VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +     + +L+     + A  +SP G  L  +     DT  +L+ +D 
Sbjct: 1190 NVSDGTKRAQLIGHTDAVTACAFSPDGSLLATTSD---DTTVRLWQVDT 1235



 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 93/273 (34%), Gaps = 15/273 (5%)

Query: 167 TGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           TG  G   S  L    SV  +     ++ + D     +R +       ++   FSP+   
Sbjct: 740 TGHAGGIYSCALSPDGSVLATASDDGTVQIRDLAAMTVRAVLAGHTAAIWRCTFSPDGTS 799

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A       +   V L D     A + + + R+ +    FS +G     +  ++  + ++
Sbjct: 800 LA----TAGNDGVVRLWDVESG-ATRSVLSHRAAVTCCAFSPDGAVLA-TTAQNGIVRLW 853

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            V   + A   +        S +++PD   +   +  +G  +++   S       +    
Sbjct: 854 GV-ADAQARWSVEGHSGGAWSCAFAPDGRWLA-TAGSDGLVRIW--DSADGTPAGVLSGH 909

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            A+      SP G L+A      +   +  + +   +  L      L    +SP G+ L 
Sbjct: 910 GATVRACSISPDGTLVATVS-DDQTARLWDLAERSEKAVLTGHSGRLWECVFSPDGQILA 968

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                  D  ++L+++     +  L        
Sbjct: 969 ---TGGHDGTARLWNVCETTEHAALAGHGGAVR 998



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 72/205 (35%), Gaps = 15/205 (7%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+   +A       +     L + R      R+      + +  FS +G        
Sbjct: 1085 AFSPDGTLLATT----GNDGTTRLWEIRTGEERLRLRGHTGWVRSCAFSPDGALLATCG- 1139

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D    ++ V         + +     +    +SPD + +   S  +G  +L+ +  +G+
Sbjct: 1140 LDRTTRLWQV--TDGVLVAVLDGHQNTVHCCDFSPDGTVLATCSG-DGMTRLWNVS-DGT 1195

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             + ++    +A      +SP G L+A T        +  +        L+     +++  
Sbjct: 1196 KRAQLIGHTDA-VTACAFSPDGSLLATTS-DDTTVRLWQVDTGEVSHVLMGHTHWVESCA 1253

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSI 421
            +SP G  L        D   +L+++
Sbjct: 1254 FSPDGTILA---TAGSDGVIRLWNV 1275


>gi|255589668|ref|XP_002535042.1| acylamino-acid-releasing enzyme, putative [Ricinus communis]
 gi|223524139|gb|EEF27340.1| acylamino-acid-releasing enzyme, putative [Ricinus communis]
          Length = 667

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/336 (12%), Positives = 104/336 (30%), Gaps = 77/336 (22%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIR---YLTPSRDQILFEPRFSPNQQKVAYAT 230
            +R+++   +      + +  +   D  + +              +P ++PN + + + +
Sbjct: 43  ATRVVYTVRTTDLDKNRGNTQLYLLDLRHPKAAPVRLTQAAASSSDPEWAPNGEAIYFLS 102

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---------------- 274
                                ++ +    +   R S  G R L                 
Sbjct: 103 --GRSGSSQVWRLPLTGGEASKVTDLPLDVDNFRLSPQGDRLLFSMAVFRDCADLACTKK 160

Query: 275 ------------------------SVQKDEAMDIYSVDLQ-----SNATERLTNTLFINI 305
                                   +        +YS  +      S     L+  L  ++
Sbjct: 161 RLDEQAKVKASGKVYDKLFVRHWDTWADGRNNVLYSAPIDASGKVSAQPVSLSGKLDGDV 220

Query: 306 SAS----------YSPDSSQIVFESDREGKEQ-------LYVMQSNGSDQKRISQDKEAS 348
             S          +SPD   + F +   G+ +       +Y + + G +   ++ D  A 
Sbjct: 221 -PSKPFGDHDDYHFSPDGKTVAFSARIAGRTEAWSTNFDVYTVPAAGGEPANLTADNPAW 279

Query: 349 YFDPVWSPQGDLIAFT-----KFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSG 401
               ++SP G  +A+       F  ++F + ++     ++R + +  D ++    W+P  
Sbjct: 280 DTKAIYSPDGKTLAYVAMTKPTFEADRFHLVLIDVATGKKRTVADHWDRSIADYRWTPDS 339

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           ++++ +    G    +L+SID      T +    Y 
Sbjct: 340 KAILATADDIGQ--HRLFSIDAASGKVTALTGNGYV 373



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 98/312 (31%), Gaps = 81/312 (25%)

Query: 210 RDQILFEPRFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRA-PKRIGNFRSMILAP 263
           R + +  P  SP+  +V Y         +    ++YL+D R  +A P R+    +    P
Sbjct: 30  RMERVGNPVLSPDATRVVYTVRTTDLDKNRGNTQLYLLDLRHPKAAPVRLTQAAASSSDP 89

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---- 319
            ++ NG+       +  +  ++ + L      ++T+      +   SP   +++F     
Sbjct: 90  EWAPNGEAIYFLSGRSGSSQVWRLPLTGGEASKVTDLPLDVDNFRLSPQGDRLLFSMAVF 149

Query: 320 -----------------------------------SDREGKEQLYV---MQSNGSDQKR- 340
                                              +  +G+  +     + ++G    + 
Sbjct: 150 RDCADLACTKKRLDEQAKVKASGKVYDKLFVRHWDTWADGRNNVLYSAPIDASGKVSAQP 209

Query: 341 ----------ISQDKEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMKKDGSQE 383
                     +       + D  +SP G  +AF+             F +  +   G + 
Sbjct: 210 VSLSGKLDGDVPSKPFGDHDDYHFSPDGKTVAFSARIAGRTEAWSTNFDVYTVPAAGGEP 269

Query: 384 RLLVEDSNLQAPTW------SPSGRSLIFSRKKDGDTGSK---LYSIDL-NGRNETLIN- 432
             L  D     P W      SP G++L +         +    L  ID+  G+  T+ + 
Sbjct: 270 ANLTAD----NPAWDTKAIYSPDGKTLAYVAMTKPTFEADRFHLVLIDVATGKKRTVADH 325

Query: 433 TPAYASDPQWVG 444
                +D +W  
Sbjct: 326 WDRSIADYRWTP 337



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 70/215 (32%), Gaps = 22/215 (10%)

Query: 157 TISDDIYQSITGEKGD----FNSRILFVSESVVSGIIKNSLCVM--DRDGANIRYLTPSR 210
             S  +Y  +     D      + +L+ +    SG +      +    DG          
Sbjct: 169 KASGKVYDKLFVRHWDTWADGRNNVLYSAPIDASGKVSAQPVSLSGKLDGDVPSKPFGDH 228

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDI------LRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           D       FSP+ + VA++               VY +            +  +      
Sbjct: 229 DDYH----FSPDGKTVAFSARIAGRTEAWSTNFDVYTVPAAGGEPANLTADNPAWDTKAI 284

Query: 265 FSSNGKRALISV-----QKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVF 318
           +S +GK            + +   +  +D+ +     + +    +I+   ++PDS  I+ 
Sbjct: 285 YSPDGKTLAYVAMTKPTFEADRFHLVLIDVATGKKRTVADHWDRSIADYRWTPDSKAILA 344

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            +D  G+ +L+ + +       ++ +   + FD  
Sbjct: 345 TADDIGQHRLFSIDAASGKVTALTGNGYVAGFDVA 379



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 82/227 (36%), Gaps = 16/227 (7%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           DD + S  G+   F++RI        +      +  +   G     LT        +  +
Sbjct: 229 DDYHFSPDGKTVAFSARIA---GRTEAWSTNFDVYTVPAAGGEPANLTADNPAWDTKAIY 285

Query: 220 SPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ + +AY          D   + L+D    +      ++   I   R++ + K  L +
Sbjct: 286 SPDGKTLAYVAMTKPTFEADRFHLVLIDVATGKKRTVADHWDRSIADYRWTPDSKAILAT 345

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                   ++S+D  S     LT           + D + +  ++      QLY  +  G
Sbjct: 346 ADDIGQHRLFSIDAASGKVTALT-GNGYVAGFDVARD-TIVTSQASLSSGAQLYKFKLGG 403

Query: 336 S--DQKRISQDKEASYFDPVWSPQGDL--IAFTKFSGEKFAIGVMKK 378
           +    ++++   EA+  D  +   G+    +FT  +G+     VMK 
Sbjct: 404 TADKAEQLTHLNEAALADVKF---GEYEQFSFTGANGDTVYGHVMKP 447


>gi|328951523|ref|YP_004368858.1| WD40 repeat-containing protein [Marinithermus hydrothermalis DSM
           14884]
 gi|328451847|gb|AEB12748.1| WD40 repeat-containing protein [Marinithermus hydrothermalis DSM
           14884]
          Length = 316

 Score = 81.2 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 85/228 (37%), Gaps = 19/228 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  ++A ++ D      + ++D       +R+      ILA  +S +G R  IS  
Sbjct: 43  ALSPDGARLAASSADH----ALVILDAATGAELQRLTGHFGRILALAWSPDGTRL-ISSS 97

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D  + +++V   S    R+     + ++ +++P   ++       G + +  +  +G+ 
Sbjct: 98  RDATVRVWAV-GSSRELRRVPVGKRLVLALAWNPTGLEVAL----GGADGVVRLWRSGTA 152

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           + R             WSP G  +A    +G    +  +   G   R L     ++A  W
Sbjct: 153 EVRALSGPGPGIAALAWSPDGAHLA----AGGYAGVVRVWTSGRPVRDLPLGGVVRALAW 208

Query: 398 SPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTPAYASDPQWVG 444
           SP G  L       G+TG   L+++        L           W  
Sbjct: 209 SPDGAWLA----AGGETGQVHLWAVGGWRAGPVLSGPEGEVLALAWSP 252



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 87/249 (34%), Gaps = 22/249 (8%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             GA ++ LT    +IL    +SP+  ++  ++ D      V +      R  +R+   +
Sbjct: 66  ATGAELQRLTGHFGRILAL-AWSPDGTRLISSSRD----ATVRVWAVGSSRELRRVPVGK 120

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQI 316
            ++LA  ++  G    +      A  +  +     A  R  +     I+A ++SPD + +
Sbjct: 121 RLVLALAWNPTGLEVAL----GGADGVVRLWRSGTAEVRALSGPGPGIAALAWSPDGAHL 176

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                  G   +  + ++G   + +            WSP G  +A       +  +  +
Sbjct: 177 A----AGGYAGVVRVWTSGRPVRDLPLGGV--VRALAWSPDGAWLA-AGGETGQVHLWAV 229

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTPA 435
               +   L   +  + A  WSP G  L        D   +++    +GR   ++   P 
Sbjct: 230 GGWRAGPVLSGPEGEVLALAWSPEGNRLA---SGGADLTVRIWEA-GSGRPLQVLGPLPG 285

Query: 436 YASDPQWVG 444
                 W  
Sbjct: 286 PVHAVAWGP 294



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 52/201 (25%), Gaps = 49/201 (24%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           + S+ L +    +   T+    + + SPD +++   S       L ++ +    + +   
Sbjct: 19  LGSLPLPTLPAWQRPGTVGFGDTLALSPDGARLAASS---ADHALVILDAATGAELQRLT 75

Query: 344 DKEASYFDPVWSPQGDLIAFTKFS------------------------------------ 367
                     WSP G  +  +                                       
Sbjct: 76  GHFGRILALAWSPDGTRLISSSRDATVRVWAVGSSRELRRVPVGKRLVLALAWNPTGLEV 135

Query: 368 ---GEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              G    + + +   ++ R L      + A  WSP G  L           + +  +  
Sbjct: 136 ALGGADGVVRLWRSGTAEVRALSGPGPGIAALAWSPDGAHLA------AGGYAGVVRVWT 189

Query: 424 NGRNETLINTPAYASDPQWVG 444
           +GR    +          W  
Sbjct: 190 SGRPVRDLPLGGVVRALAWSP 210



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 6/96 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+   +A       +  +V+L      RA   +      +LA  +S  G R   S  
Sbjct: 207 AWSPDGAWLA----AGGETGQVHLWAVGGWRAGPVLSGPEGEVLALAWSPEGNRLA-SGG 261

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            D  + I+         + L        + ++ P  
Sbjct: 262 ADLTVRIWEA-GSGRPLQVLGPLPGPVHAVAWGPQG 296


>gi|317038876|ref|XP_001402352.2| hypothetical protein ANI_1_2284184 [Aspergillus niger CBS 513.88]
          Length = 336

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 91/269 (33%), Gaps = 50/269 (18%)

Query: 212 QILFEPRFSPNQQKVAY---------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             L  P +SP+ + V Y          +   +    ++  D   D     +         
Sbjct: 3   PALRSPAWSPDGKYVIYEKQGPTGGSTSTSKKQYSDLWNFDPDWDYRFTDVFPMAKRGGC 62

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---------------NTLFINISA 307
           P          +S Q +   +   + LQ N T+++T                        
Sbjct: 63  P-------MMAMSQQMEGVAESNLMRLQMNGTDQVTLFETKKGMINPSIAEGFNARAYQG 115

Query: 308 SYSPD------SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           S+ P+           F   +     ++ +   G+    ++ +   +Y  P ++  G  +
Sbjct: 116 SWGPNDTNITFGYGAYFVGRQSSPGFIFSVTPEGTGVTLLAGNNITNYGFPSYNYDGTQV 175

Query: 362 AFTKFSGEKFA--------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            F  + G            + ++     Q   L  + +   P +SP G+ ++F+R+ + D
Sbjct: 176 VFRTWPGTASNGTTVGTTGLAIVDLPSRQVTQLTTEWD-NLPAFSPDGKKILFTRRTNLD 234

Query: 414 T---GSKLYSIDLNGRNETLINTPAYASD 439
                  +++++ +G   T + TP+ ASD
Sbjct: 235 NIGDNYDIFTMNPDGSELTKL-TPSIASD 262



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 79/206 (38%), Gaps = 27/206 (13%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F     FV      G     +  +  +G  +  L  +       P ++ +  +V + T+ 
Sbjct: 126 FGYGAYFVGRQSSPGF----IFSVTPEGTGVTLLAGNNITNYGFPSYNYDGTQVVFRTWP 181

Query: 233 DEDILRVYLMDTR---IDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKD-----EAMD 283
                   +  T    +D   +++    +     P FS +GK+ L + + +     +  D
Sbjct: 182 GTASNGTTVGTTGLAIVDLPSRQVTQLTTEWDNLPAFSPDGKKILFTRRTNLDNIGDNYD 241

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSS-------------QIVFESDREGKEQLYV 330
           I++++   +   +LT ++  +  A ++ D                 +++   +    + +
Sbjct: 242 IFTMNPDGSELTKLTPSIASDAHAVWTQDGRILYSTAMFGFQQEAPLYDDSMQPYAIIML 301

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSP 356
           M+++GS++  +S +       P+++P
Sbjct: 302 MEADGSNKTALS-NSLWEDAMPMFAP 326


>gi|60680412|ref|YP_210556.1| putative cytochrome c binding protein [Bacteroides fragilis NCTC
           9343]
 gi|60491846|emb|CAH06604.1| putative cytochrome c binding protein [Bacteroides fragilis NCTC
           9343]
          Length = 478

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 57/331 (17%), Positives = 115/331 (34%), Gaps = 68/331 (20%)

Query: 147 SPASWRKIAHTISD-DIYQSITGEKGDFNSRILFVSESVVSGIIKNSL------------ 193
               W+K+    +  +I+  IT  +G   +R   + +++ +  I   L            
Sbjct: 87  PTKKWKKLLQKAAGKEIFIRITLLRGGKWTRYADIKDTISNEPIDEYLVYRLLYPGYELW 146

Query: 194 -----CVMDRDGANIRYLTPSRD---QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                   D  G     +  +R+   Q +    F+ N  +        +    +   + +
Sbjct: 147 NEMGIYQRDLTGYEETPIAENRNFGKQCINCHTFNQNSPETMMVHVRGKSGGTLICKNGK 206

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------DEAMDIYSVDL-------QS 291
           +++   +   F++      +  +G+    S+ +            I   DL        +
Sbjct: 207 VEKVNTKPEGFKNGGTYAAWHPSGRYIAFSMNEIQQFFHSSGQKPIEVSDLAADLIVYDT 266

Query: 292 NATERLTNT-----LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                LT++      ++    +++PD   + F      KE++  + S   D  RI  D E
Sbjct: 267 EKKTFLTDSLICGERYMETFPNWTPDGKTLYFCRGNAYKEKM-PLDSIRYDLCRIGFDPE 325

Query: 347 ASYFD-----------------PVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQ 382
           +  F                  P  SP G  + FT      F+I        ++  D  +
Sbjct: 326 SGKFGTPECVYRASEQGKSVSFPRVSPNGKYLMFTLSDYGNFSIWHPESELCLLTMDTGE 385

Query: 383 ERLL--VEDSNLQAP-TWSPSGRSLIFSRKK 410
            RLL  V  +++++  TWS SGR  +FS K+
Sbjct: 386 IRLLNEVNSNDVESFHTWSSSGRWFVFSSKR 416


>gi|327395903|dbj|BAK13325.1| cytoplasmic protein YidR [Pantoea ananatis AJ13355]
          Length = 417

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 81/210 (38%), Gaps = 42/210 (20%)

Query: 221 PNQQK----VAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           P+       +A+     +   E    V+++D      P+++ +F      P         
Sbjct: 222 PDGSWQRWAIAFTGDTLSASGEKCPEVFVVDL-----PEKLEDFAKPGFFP--------- 267

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-Y---SPDSSQIVF-ESDREGKEQ 327
                 + + D            R+T T  +      +   SPD S+I F  +D     Q
Sbjct: 268 -----LEGSSDRLPAPPAGVRQRRITTTRGLASQPRHWLRSSPDGSKIAFLMADNHQVIQ 322

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           L+V+  NG +  ++++   +      W P+G+ IAF           V+   G  ERL V
Sbjct: 323 LWVVSPNGGEPHQVTRLTHSIQSAFSWQPRGEAIAFIS-DNSVMRCHVV--TGECERLTV 379

Query: 388 EDSNLQAPT-----WSPSGRSLIFSRKKDG 412
             S  +AP+     WSP G+ + F R+ +G
Sbjct: 380 RSS--EAPSGDAVVWSPDGKQIAFMREIEG 407



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 12/138 (8%)

Query: 247 DRAPKRIGNFRSMILAPR-F---SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTN-T 300
               +RI   R +   PR +   S +G +         + + ++ V        ++T  T
Sbjct: 281 GVRQRRITTTRGLASQPRHWLRSSPDGSKIAFLMADNHQVIQLWVVSPNGGEPHQVTRLT 340

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPV-WSPQG 358
             I  + S+ P    I F SD      +        + +R++ +  EA   D V WSP G
Sbjct: 341 HSIQSAFSWQPRGEAIAFISDNS----VMRCHVVTGECERLTVRSSEAPSGDAVVWSPDG 396

Query: 359 DLIAFTKFSGEKFAIGVM 376
             IAF +       +  +
Sbjct: 397 KQIAFMREIEGWRQLFTV 414



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 74/211 (35%), Gaps = 28/211 (13%)

Query: 139 IIGKKFFSSPASWRKIAHTI-----------SDDIYQSITGEKGDFNSRILFVSESVVSG 187
           I  + +     SW++ A                +++     EK +  ++  F      S 
Sbjct: 214 IGNQGYQKPDGSWQRWAIAFTGDTLSASGEKCPEVFVVDLPEKLEDFAKPGFFPLEGSSD 273

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMD 243
            +          G   R +T +R  +  +PR     SP+  K+A+   D+  +++++++ 
Sbjct: 274 RLP-----APPAGVRQRRITTTR-GLASQPRHWLRSSPDGSKIAFLMADNHQVIQLWVVS 327

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  +      S+  A  +   G+             +    + +   ERLT     
Sbjct: 328 PNGGEPHQVTRLTHSIQSAFSWQPRGEAIAFISDNS----VMRCHVVTGECERLTVRSSE 383

Query: 304 NISA---SYSPDSSQIVFESDREGKEQLYVM 331
             S     +SPD  QI F  + EG  QL+ +
Sbjct: 384 APSGDAVVWSPDGKQIAFMREIEGWRQLFTV 414


>gi|298377132|ref|ZP_06987086.1| cytochrome c binding protein [Bacteroides sp. 3_1_19]
 gi|298266116|gb|EFI07775.1| cytochrome c binding protein [Bacteroides sp. 3_1_19]
          Length = 489

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 68/479 (14%), Positives = 152/479 (31%), Gaps = 113/479 (23%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSP------VSI--AFTKFVSIDELGGKV 65
           ++++C ++  + G          +      +  P      V +  A   F  +++    +
Sbjct: 3   RLSICWIIGCLLGLVACRPEVPAQAEQGETDVFPDYREVTVPVNMAPPNFKLVNQQLQGI 62

Query: 66  SE--------VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
           +         +++ D     VFNL                    DW  L           
Sbjct: 63  TRLKTMNRELIIAAD---HGVFNLPET-----------------DWKVLSQDA------- 95

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSR 176
                              KQI    +F  P + W+++    S  IY S          R
Sbjct: 96  -----------------QGKQIDVTVYFREPQSDWKQM----SFPIYVSRDSVDAYLVYR 134

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            +F    + + +     CV +    +I    + +   +          +++ +      +
Sbjct: 135 RIFPGYRMWNEMGIYKRCVENYVEKSILDNQSTNNSCMNCHAFCERQGEQMLFHQRGSHN 194

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------DEAMDIYSVD 288
              +         A +R G   S +  P +  +G+    S  +        +   I   D
Sbjct: 195 GTYLIDHRQVKKIALERDGKPASFVY-PYWHPSGRYVAFSTNETHQDFHLSDENRIEVYD 253

Query: 289 LQS------NATERLTNTL------FINISASYSPDSSQIVFES---------DREGKEQ 327
           ++S         ER+ ++             +++PD + ++F S          R+ +  
Sbjct: 254 VESDVLIYDTEKERVFSSPLLASMACYETFPTFTPDGNYLLFCSADSVCMPENYRDVRYN 313

Query: 328 LYVM---QSNGSDQKRI-----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG----- 374
           L  +     +GS   ++     +++   S   P  SP G  + +T      F+I      
Sbjct: 314 LLRVAFDPEDGSIGTQVDTLYNAREAGRSVKFPRVSPDGKRLLYTVSDYGNFSIWHKDAD 373

Query: 375 --VMKKDGSQERLL--VEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             ++         L  V   ++++  +WS + R  +FS ++D    ++ Y + +N R +
Sbjct: 374 LYMLDLSTGAIDSLPEVNSPDVESYHSWSGNSRWFVFSSRRDDGLFTRPYLVHVNERGQ 432


>gi|254414838|ref|ZP_05028602.1| hypothetical protein MC7420_1123 [Microcoleus chthonoplastes PCC
           7420]
 gi|196178327|gb|EDX73327.1| hypothetical protein MC7420_1123 [Microcoleus chthonoplastes PCC
           7420]
          Length = 428

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 103/279 (36%), Gaps = 29/279 (10%)

Query: 135 DRKQIIGKKFFSSPASW----RKIAHTIS---DDIYQSITGEKGDFNSRILFVSESVVSG 187
           D + ++   + +    W    R+I HT++   D +        G          +++VSG
Sbjct: 156 DGETLVSGGYDNMIKVWNLQTREIIHTLAGHTDSVVSVAISPDG----------KTLVSG 205

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              N+L + + +              +     SPN++ VA A+ D      + L D    
Sbjct: 206 SADNTLKMWNLNTGTEIMTADEHLDSVLSVAISPNRKTVASASSDG----TIKLWDLITG 261

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINIS 306
              + +   +  +L+   S +G+  + S   D+ + ++  +L++    R LT      +S
Sbjct: 262 YEIRTLFGHKDAVLSVAISPDGQNLV-SGSSDDTIKVW--NLKTGKEIRTLTGHRNSVLS 318

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + +PD   +V        + + V      ++ R     E S      SP G ++  +  
Sbjct: 319 VAINPDGQTVV---SGGYDDTIKVWNLKTGEEIRTITGHEDSVLSVAVSPAGQMLV-SGS 374

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           S     +  +K       L    S++ +   S  G+++ 
Sbjct: 375 SDNTVKVWHLKTGEEIHTLRGHSSSVISVALSRDGKTIA 413



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/229 (11%), Positives = 74/229 (32%), Gaps = 18/229 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S    + +    + V++ +    ++        +     SP+ + +    YD+     + 
Sbjct: 115 SHQESTPLPPLEVAVLNYELIEHQFTLNDFSDSVLSVAISPDGETLVSGGYDN----MIK 170

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + +       +      +++   S +GK  + S   D  + ++  +L +     +T  
Sbjct: 171 VWNLQTREIIHTLAGHTDSVVSVAISPDGKTLV-SGSADNTLKMW--NLNTGTEI-MTAD 226

Query: 301 LFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             ++   S + SP+   +   S       + +       + R     + +      SP G
Sbjct: 227 EHLDSVLSVAISPNRKTVASASS---DGTIKLWDLITGYEIRTLFGHKDAVLSVAISPDG 283

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS--PSGRSLI 405
             +           I V      +E   +        + +  P G++++
Sbjct: 284 QNLVSGSSDDT---IKVWNLKTGKEIRTLTGHRNSVLSVAINPDGQTVV 329



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 68/201 (33%), Gaps = 15/201 (7%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             L V +++  +      + +F   +L+   S +G+  +          I   +LQ+   
Sbjct: 123 PPLEVAVLNYELIEHQFTLNDFSDSVLSVAISPDGETLV---SGGYDNMIKVWNLQTREI 179

Query: 295 ER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              L       +S + SPD   +V  S       L +   N   +   + +   S     
Sbjct: 180 IHTLAGHTDSVVSVAISPDGKTLVSGS---ADNTLKMWNLNTGTEIMTADEHLDSVLSVA 236

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
            SP    +A     G    I +     G + R L    + + +   SP G++L+      
Sbjct: 237 ISPNRKTVASASSDGT---IKLWDLITGYEIRTLFGHKDAVLSVAISPDGQNLV---SGS 290

Query: 412 GDTGSKLYSIDLNGRNETLIN 432
            D   K++++       TL  
Sbjct: 291 SDDTIKVWNLKTGKEIRTLTG 311



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 67/182 (36%), Gaps = 34/182 (18%)

Query: 109 QVLVTGRVIKEGKDRLRVE----FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
             +++  +  +G++ +        ++W++K  K+I                H   + +  
Sbjct: 272 DAVLSVAISPDGQNLVSGSSDDTIKVWNLKTGKEIRTLT-----------GHR--NSVLS 318

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQ 223
                 G          ++VVSG   +++ V + + G  IR +T   D +L     SP  
Sbjct: 319 VAINPDG----------QTVVSGGYDDTIKVWNLKTGEEIRTITGHEDSVLSV-AVSPAG 367

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           Q +   + D+     V +   +       +    S +++   S +GK    S   D+ + 
Sbjct: 368 QMLVSGSSDN----TVKVWHLKTGEEIHTLRGHSSSVISVALSRDGKTIA-SCSSDKTIK 422

Query: 284 IY 285
           ++
Sbjct: 423 VW 424


>gi|167624179|ref|YP_001674473.1| peptidase S9 prolyl oligopeptidase [Shewanella halifaxensis
           HAW-EB4]
 gi|167354201|gb|ABZ76814.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella halifaxensis HAW-EB4]
          Length = 683

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/275 (14%), Positives = 88/275 (32%), Gaps = 41/275 (14%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             R    +E   +G     L V   D                   +S + +   +    +
Sbjct: 162 KDRFAAEAERDTTGREYKQLMVRHWD------------------TWSDHSRSHLFVAQLN 203

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-------AMDIYS 286
            + +   +  T           F  M     F+ +GK  + + +            D++ 
Sbjct: 204 GNKVSNAVDVTAGLDTETPPKPFSGME-EVTFTPDGKHVVYTAKAPGKDQAWITNYDLWK 262

Query: 287 VDLQSNATERLT-NTLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSD 337
           V +     E LT +    +   +YS D   +         FE+DR    ++ +  +    
Sbjct: 263 VSVAGGTAENLTESNKAWDAHPTYSTDGRYLAYFAMTKPGFEADR---YRIMLRDTVTGQ 319

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +K ++   + S     +      +  T     + +I  +       + +  + +      
Sbjct: 320 EKEVAPLWDRSPSSLAFGKDNKTLYVTAQDLGQVSIFEVNTQFGDVKTIYNEGSNNIVGI 379

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +   +IFS K   + G  LYSI+L+G+N   + 
Sbjct: 380 --NNDKIIFSNKTLVEPG-DLYSINLDGQNLNRLT 411



 Score = 75.4 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 96/297 (32%), Gaps = 34/297 (11%)

Query: 175 SRILFVSESVVS-GIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYD 232
           ++I++  +++ + G     L + D   ++ +     S         F PN   + +    
Sbjct: 48  TKIVYAVKNIDAEGEASTDLYIQDLSSSSSQAKQLTSAAGTEHSVVFGPNDNSIYFLAAR 107

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----------SVQKDEA 281
           D    +VY +      A + + +F   +   + S +GK+ ++           +  KD  
Sbjct: 108 DGSS-QVYKLALDGGEAIQ-VTDFPLDVEGFKLSQDGKQVVVNMRVFPECTDLACSKDRF 165

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
                 D      ++L      +    +S  S   +F +   G +    +          
Sbjct: 166 AAEAERDTTGREYKQLM-VRHWDT---WSDHSRSHLFVAQLNGNKVSNAVDVTAGLDTET 221

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVEDSNLQ- 393
                +   +  ++P G  + +T  +          + +  +   G     L E +    
Sbjct: 222 PPKPFSGMEEVTFTPDGKHVVYTAKAPGKDQAWITNYDLWKVSVAGGTAENLTESNKAWD 281

Query: 394 -APTWSPSGRSLIFSRKKDGDTGSKLYSI----DLNGRNETLINTPAYASDPQWVGF 445
             PT+S  GR L +         +  Y I     + G+ + +   P +   P  + F
Sbjct: 282 AHPTYSTDGRYLAYFAMTKPGFEADRYRIMLRDTVTGQEKEV--APLWDRSPSSLAF 336



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 82/258 (31%), Gaps = 26/258 (10%)

Query: 214 LFEPRFSPNQQKVAYATY----DDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSN 268
           L     S +  K+ YA      + E    +Y+ D        K++ +      +  F  N
Sbjct: 38  LHSAALSNDGTKIVYAVKNIDAEGEASTDLYIQDLSSSSSQAKQLTSAAGTEHSVVFGPN 97

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FESDREGKE 326
                    +D +  +Y + L      ++T+          S D  Q+V       E  +
Sbjct: 98  DNSIYFLAARDGSSQVYKLALDGGEAIQVTDFPLDVEGFKLSQDGKQVVVNMRVFPECTD 157

Query: 327 QLYVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS- 381
                    ++ +R +  +E           WS       F            +      
Sbjct: 158 LACSKDRFAAEAERDTTGREYKQLMVRHWDTWSDHSRSHLFVAQLNGNKVSNAVDVTAGL 217

Query: 382 -QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNG--------RN 427
             E      S ++  T++P G+ ++++ K  G      T   L+ + + G         N
Sbjct: 218 DTETPPKPFSGMEEVTFTPDGKHVVYTAKAPGKDQAWITNYDLWKVSVAGGTAENLTESN 277

Query: 428 ETLINTPAYASDPQWVGF 445
           +     P Y++D +++ +
Sbjct: 278 KAWDAHPTYSTDGRYLAY 295



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 8/184 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G              + I    L  +   G     LT S       P +S + 
Sbjct: 231 EVTFTPDGKHVVYTAKAPGKDQAWITNYDLWKVSVAGGTAENLTESNKAWDAHPTYSTDG 290

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D  R+ L DT   +  +    +     +  F  + K   ++ Q  
Sbjct: 291 RYLAYFAMTKPGFEADRYRIMLRDTVTGQEKEVAPLWDRSPSSLAFGKDNKTLYVTAQDL 350

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
             + I+ V+ Q    + + N    NI      ++ +I+F +    +   LY +  +G + 
Sbjct: 351 GQVSIFEVNTQFGDVKTIYNEGSNNIVGI---NNDKIIFSNKTLVEPGDLYSINLDGQNL 407

Query: 339 KRIS 342
            R++
Sbjct: 408 NRLT 411


>gi|71899724|ref|ZP_00681876.1| Peptidase S9, prolyl oligopeptidase active site region [Xylella
           fastidiosa Ann-1]
 gi|71730519|gb|EAO32598.1| Peptidase S9, prolyl oligopeptidase active site region [Xylella
           fastidiosa Ann-1]
          Length = 795

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 100/306 (32%), Gaps = 40/306 (13%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD- 197
           ++ K          KI H +++  Y+     +          +    +    ++L ++D 
Sbjct: 246 LVTKAKNIDEGQIGKIPHYVTESGYEEFQDVR----------TRVGRNMPAPHTLWLIDL 295

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNF 256
           +DG   +    S   I  +P                  + +    D      P RI  N 
Sbjct: 296 KDGTARQLSFSSLPGINEDP---------------LAALRKANRKDPFKGERPVRIETNA 340

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-----RLTNTLFINISAS--- 308
            S + A  ++ +G+   + ++  +  D +   +           RL +  +IN   +   
Sbjct: 341 ESNVPAIHWTQDGRNVAVDIRSIDNKDRWIAAVDLKQATLNVRHRLHDGAWINWDFNDFG 400

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS- 367
           + PD+  +   S+  G   LY ++  G+ ++R           P  S  G  + F     
Sbjct: 401 WLPDNRTLWLLSEESGYSHLYTIEETGTPKQR--TFGHWEVSAPRLSADGRSVYFVCNPT 458

Query: 368 -GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               + +  +  D      L     ++    SP GR ++          S+L  I  NG 
Sbjct: 459 WPGGYEVCKLDLDSGHFDTLTALQGVEDFDLSPDGRQIL-VLYSGSYLPSQLAVISTNGG 517

Query: 427 NETLIN 432
              ++ 
Sbjct: 518 QARVLT 523



 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 71/201 (35%), Gaps = 12/201 (5%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPK-RIGNF 256
           G     +  + +  +    ++ + + VA    + D++D     +   +     + R+ + 
Sbjct: 330 GERPVRIETNAESNVPAIHWTQDGRNVAVDIRSIDNKDRWIAAVDLKQATLNVRHRLHDG 389

Query: 257 RSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             +        +  + +   +  ++     +Y+++ ++   ++ T   +   +   S D 
Sbjct: 390 AWINWDFNDFGWLPDNRTLWLLSEESGYSHLYTIE-ETGTPKQRTFGHWEVSAPRLSADG 448

Query: 314 SQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-AFTKFSGEK 370
             + F  +    G  ++  +  +      ++  +    FD   SP G  I      S   
Sbjct: 449 RSVYFVCNPTWPGGYEVCKLDLDSGHFDTLTALQGVEDFD--LSPDGRQILVLYSGSYLP 506

Query: 371 FAIGVMKKDGSQERLLVEDSN 391
             + V+  +G Q R+L +   
Sbjct: 507 SQLAVISTNGGQARVLTDTRT 527



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 60/159 (37%), Gaps = 10/159 (6%)

Query: 202 NIRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           N+R+       I ++     + P+ + +   + +       +L        PK+      
Sbjct: 381 NVRHRLHDGAWINWDFNDFGWLPDNRTLWLLSEESG---YSHLYTIEETGTPKQRTFGHW 437

Query: 259 MILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            + APR S++G+              ++  +DL S   + LT    +      SPD  QI
Sbjct: 438 EVSAPRLSADGRSVYFVCNPTWPGGYEVCKLDLDSGHFDTLTALQGVEDF-DLSPDGRQI 496

Query: 317 -VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            V  S      QL V+ +NG   + ++  + +++    W
Sbjct: 497 LVLYSGSYLPSQLAVISTNGGQARVLTDTRTSTFKAKQW 535



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 50/157 (31%), Gaps = 9/157 (5%)

Query: 288 DLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-----RI 341
             +     R+ TN      +  ++ D   +  +      +  ++   +          R+
Sbjct: 327 PFKGERPVRIETNAESNVPAIHWTQDGRNVAVDIRSIDNKDRWIAAVDLKQATLNVRHRL 386

Query: 342 SQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                    + D  W P    +           +  +++ G+ ++       + AP  S 
Sbjct: 387 HDGAWINWDFNDFGWLPDNRTLWLLSEESGYSHLYTIEETGTPKQRTFGHWEVSAPRLSA 446

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPA 435
            GRS+ F        G ++  +DL+ G  +TL     
Sbjct: 447 DGRSVYFVCNPTWPGGYEVCKLDLDSGHFDTLTALQG 483


>gi|332708633|ref|ZP_08428606.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332352589|gb|EGJ32156.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1183

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 88/256 (34%), Gaps = 20/256 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++V S     ++ + D        +       ++   FS + + +A  + D      V L
Sbjct: 916  KTVASSSRDETIRLWDIKTGKCLRILHGHTDWIYSVTFSGDGKTLASGSADQ----TVRL 971

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D R       +    + I +  FSS+GK    S   D+ + ++  D+ +    +     
Sbjct: 972  WDQRTGDCVSTLEGHTNQIWSVAFSSDGKTLA-SSNTDQTVRLW--DVSTGECLKTLQGH 1028

Query: 302  FINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               + S ++SP  + +   S     E + +   +  +  ++ +      F   +SP G+ 
Sbjct: 1029 GNRVKSVAFSPKDNILASCST---DETIRLWDLSTGECSKLLRGHNNWVFSVAFSPDGNT 1085

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKL 418
            IA          + V      + R           +  +S  G+ +    +   D   +L
Sbjct: 1086 IASGSHDQT---VKVWDVSTGECRHTCTGHTHLISSVAFSGDGQIVASGSQ---DQTVRL 1139

Query: 419  YSIDLNGRNETLINTP 434
            +     G+   ++  P
Sbjct: 1140 WDTK-TGKCLKILRAP 1154



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 92/310 (29%), Gaps = 38/310 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G  +  G +   V  RLWD +    +                H  S  +Y       G  
Sbjct: 747  GNTLASGSNDHTV--RLWDARTGSCVSTHT-----------GH--SSGVYSVAFSTDG-- 789

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    +++ +G   +++ + D                +F   FSP    +   + D 
Sbjct: 790  --------KTLATGSGDHTVRLWDYHTGICLKTLHGHTNQIFSVAFSPEGNTLVCVSLDQ 841

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L D    +  K        +    FS +GK    S   D  + ++        
Sbjct: 842  ----TVRLWDWGTGQCLKTWQGHTDWVFPVAFSPDGKTLA-SGSNDNTVRLWDYHSD-RC 895

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
               L        S ++S D   +   S R+  E + +         RI        +   
Sbjct: 896  ISILHGHTAHVCSVAFSTDGKTVA-SSSRD--ETIRLWDIKTGKCLRILHGHTDWIYSVT 952

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            +S  G  +A +  + +   +   +       L    + + +  +S  G++L      + D
Sbjct: 953  FSGDGKTLA-SGSADQTVRLWDQRTGDCVSTLEGHTNQIWSVAFSSDGKTLA---SSNTD 1008

Query: 414  TGSKLYSIDL 423
               +L+ +  
Sbjct: 1009 QTVRLWDVST 1018



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 69/231 (29%), Gaps = 15/231 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +       +  +       +    FS + + +A  + D      V L         +
Sbjct: 590 QIRLWHVQTGKLLVICEGHTNWVRSVAFSRDGKTLASGSADH----TVKLWQVSDGSCLQ 645

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYS 310
                   + +  F+  G    IS   D  + ++  D  +     R T       S ++S
Sbjct: 646 TCTGHTDEVFSVAFNPQGNTL-ISGSSDHTVILW--DGDTGQCLNRFTGHTGCVRSVAFS 702

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D   +   SD      + +  ++     R      +      +S  G+ +A +  +   
Sbjct: 703 TDGKTLASGSD---DHTVILWDASTGSWVRTCTGHTSGVRSVAFSTDGNTLA-SGSNDHT 758

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +   +            S + +  +S  G++L       GD   +L+  
Sbjct: 759 VRLWDARTGSCVSTHTGHSSGVYSVAFSTDGKTLA---TGSGDHTVRLWDY 806



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 78/231 (33%), Gaps = 18/231 (7%)

Query: 182 ESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +++ SG   +++ +    DG+ ++  T   D++     F+P    +   + D      V 
Sbjct: 622 KTLASGSADHTVKLWQVSDGSCLQTCTGHTDEVFSV-AFNPQGNTLISGSSDH----TVI 676

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTN 299
           L D    +   R       + +  FS++GK    S   D  + ++  D  + +  R  T 
Sbjct: 677 LWDGDTGQCLNRFTGHTGCVRSVAFSTDGKTLA-SGSDDHTVILW--DASTGSWVRTCTG 733

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S ++S D + +   S+      + +  +             +  +   +S  G 
Sbjct: 734 HTSGVRSVAFSTDGNTLASGSN---DHTVRLWDARTGSCVSTHTGHSSGVYSVAFSTDGK 790

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSR 408
            +A          + +           +     Q  +  +SP G +L+   
Sbjct: 791 TLA---TGSGDHTVRLWDYHTGICLKTLHGHTNQIFSVAFSPEGNTLVCVS 838



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 63/195 (32%), Gaps = 12/195 (6%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +    FSP+ + +A    D     ++ L   +  +         + + +  FS +GK 
Sbjct: 568 GNMLSAAFSPDGRMLAICDTD----FQIRLWHVQTGKLLVICEGHTNWVRSVAFSRDGKT 623

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S   D  + ++ V    +  +  T       S +++P  + ++  S       + + 
Sbjct: 624 LA-SGSADHTVKLWQVS-DGSCLQTCTGHTDEVFSVAFNPQGNTLISGSS---DHTVILW 678

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDS 390
             +                   +S  G  +A    S +   I      GS  R      S
Sbjct: 679 DGDTGQCLNRFTGHTGCVRSVAFSTDGKTLA--SGSDDHTVILWDASTGSWVRTCTGHTS 736

Query: 391 NLQAPTWSPSGRSLI 405
            +++  +S  G +L 
Sbjct: 737 GVRSVAFSTDGNTLA 751



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 70/213 (32%), Gaps = 27/213 (12%)

Query: 128  FRLWDVKDRK---QIIGKK---FFSS-PASWRKIAHTISDDIYQSITGEKGDFNS----- 175
             RLWD+K  K    + G     +  +     + +A   +D   +      GD  S     
Sbjct: 927  IRLWDIKTGKCLRILHGHTDWIYSVTFSGDGKTLASGSADQTVRLWDQRTGDCVSTLEGH 986

Query: 176  -----RILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                  + F S+  ++ S     ++ + D                +    FSP    +A 
Sbjct: 987  TNQIWSVAFSSDGKTLASSNTDQTVRLWDVSTGECLKTLQGHGNRVKSVAFSPKDNILAS 1046

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + D+     + L D       K +    + + +  FS +G     S   D+ + ++  D
Sbjct: 1047 CSTDE----TIRLWDLSTGECSKLLRGHNNWVFSVAFSPDGNTIA-SGSHDQTVKVW--D 1099

Query: 289  LQSNATER-LTNTLFINISASYSPDSSQIVFES 320
            + +       T    +  S ++S D   +   S
Sbjct: 1100 VSTGECRHTCTGHTHLISSVAFSGDGQIVASGS 1132



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 31/87 (35%), Gaps = 9/87 (10%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWS 398
           +  +   +     +SP G ++A        F I +      +  ++ E       +  +S
Sbjct: 562 VFTETLGNMLSAAFSPDGRMLAIC---DTDFQIRLWHVQTGKLLVICEGHTNWVRSVAFS 618

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             G++L        D   KL+ +  +G
Sbjct: 619 RDGKTLA---SGSADHTVKLWQVS-DG 641



 Score = 36.9 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 9/119 (7%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           DL  +     T TL   +SA++SPD   +      +   Q+ +          I +    
Sbjct: 557 DLAGSV---FTETLGNMLSAAFSPDGRMLAIC---DTDFQIRLWHVQTGKLLVICEGHTN 610

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
                 +S  G  +A +  +     +  +  DGS  +        + +  ++P G +LI
Sbjct: 611 WVRSVAFSRDGKTLA-SGSADHTVKLWQVS-DGSCLQTCTGHTDEVFSVAFNPQGNTLI 667


>gi|289664698|ref|ZP_06486279.1| dipeptidyl peptidase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 786

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 87/214 (40%), Gaps = 17/214 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-----RLT 298
            + +RA +   +      A  +S +G+   + ++  +  D +   +  +        RL+
Sbjct: 319 LKGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWITSVDLDKARLQPRHRLS 378

Query: 299 NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++ +I+   +   + PD+  +   S+  G  QLY ++ NG  ++R     +     PV S
Sbjct: 379 DSAWISWDFNDFGWLPDNRTLWLLSEESGYSQLYTVEGNGKPRQR--TRGQWEVSMPVPS 436

Query: 356 PQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  + F         + +  +     Q   +   + ++  + SP+G+ L+  R     
Sbjct: 437 ADGSGMFFMCNQKWPGDYEVCKLDLRSDQLTEVTALNGVEGFSLSPNGQQLL-VRYSGSY 495

Query: 414 TGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
             ++L  +   G   T++    TPA+ + P W+ 
Sbjct: 496 LPTQLAVVPATGSQATVLTDTRTPAFKAQP-WIA 528



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/298 (17%), Positives = 98/298 (32%), Gaps = 77/298 (25%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--S 258
           A+  ++ PS DQ      +  + ++V Y    D   +R     +      +R+ +     
Sbjct: 28  ADPDWIGPSVDQA----WWQWDGKQVQYLLKRDGSPVRDTYRQSTGGGTAERVADTARAG 83

Query: 259 MILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +  A P + +  +R L +   D    I+  DL++ A  +LT +  I     ++ D   I 
Sbjct: 84  LDAANPSYDATRQRMLFARNGD----IFLRDLRTGALTQLTRSNEIESHPQFASDGGAIW 139

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL--------IAFTKFSGE 369
               R G    Y  +++G   +      E     P   P+ D+        +A  +   E
Sbjct: 140 ----RAGNN-WYHWRADGGTAQVAVVKAERDPNAP---PKADVLREQQLATLATLRRDKE 191

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTW------------SPSGRSLIFSRK-------- 409
           +      ++D        + +   AP +            SP GR L+   +        
Sbjct: 192 QRDALRTQED---AWRRADTTRAAAPVYLGDEVEIVDSALSPDGRHLLVVTQAKNADEGQ 248

Query: 410 ------------------------KDGDTGSKLYSIDLN-GRNETLI--NTPAYASDP 440
                                   ++      L+ +D+  G  +TL     P  A+DP
Sbjct: 249 AGKMPKYVTESGYEEFQEVRTRVGRNAPAAHALWLVDVTSGTAKTLSFDPLPGIATDP 306



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 78/251 (31%), Gaps = 33/251 (13%)

Query: 130 LWDVKDRKQIIGKKFFSSP---------ASWRKIAHTISDDIYQSITGEK-GDFNSRILF 179
           L DV        K     P         A+ RK A   +    +++  E  GD +   + 
Sbjct: 283 LVDVTSG---TAKTLSFDPLPGIATDPLAALRKAAKREALKGNRAVRVESDGDGSGPAVH 339

Query: 180 VSESVVS------GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-------PNQQKV 226
            S+   +       +      +   D    R     R        +        P+ + +
Sbjct: 340 WSDDGRNVAVEIRAVDNKDRWITSVDLDKARLQPRHRLSDSAWISWDFNDFGWLPDNRTL 399

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDI 284
              + +        L     +  P++    +  +  P  S++G        +      ++
Sbjct: 400 WLLSEESG---YSQLYTVEGNGKPRQRTRGQWEVSMPVPSADGSGMFFMCNQKWPGDYEV 456

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQ 343
             +DL+S+    +T    +    S SP+  Q++          QL V+ + GS    ++ 
Sbjct: 457 CKLDLRSDQLTEVTALNGVEGF-SLSPNGQQLLVRYSGSYLPTQLAVVPATGSQATVLTD 515

Query: 344 DKEASYFDPVW 354
            +  ++    W
Sbjct: 516 TRTPAFKAQPW 526


>gi|268317396|ref|YP_003291115.1| WD40 domain-containing protein beta Propeller [Rhodothermus marinus
           DSM 4252]
 gi|262334930|gb|ACY48727.1| WD40 domain protein beta Propeller [Rhodothermus marinus DSM 4252]
          Length = 340

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 54/265 (20%), Positives = 94/265 (35%), Gaps = 46/265 (17%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR---- 245
            N L ++ RDG  +R+L PS         +SP+ +++A  TY       V+++       
Sbjct: 59  PNQLWLVRRDGRQMRFLGPSIGSAD----WSPDGKRLA-LTYHRGLCCDVHVVTLDLESG 113

Query: 246 ----IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATE- 295
                  A   + +  +    P +  +G+R L SV            IY ++L+    E 
Sbjct: 114 QVAVWTGADTLLLSHPTASF-PHWFQDGRRLLFSVIGKAYGQLYETGIYVLNLEHRQVEG 172

Query: 296 ---------RLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                    +L      +  A    P     V+      +E     +        ++   
Sbjct: 173 PLVKSMVAAQL---GGRDRFAVGIMPQPQGRVY------RENAVRYEFATGALAVLTDFG 223

Query: 346 --EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             EA  F    SP  DLI   +       + +M   G   R L E      P WS  GR+
Sbjct: 224 PEEAFRFAVTPSPVEDLIVLERRVEGVPQLFLMDGKGRILRQLTERGGHN-PRWSYDGRA 282

Query: 404 LIFSRKKDGDTGSK----LYSIDLN 424
           ++F R  +   G++    +Y +D +
Sbjct: 283 VLFLRDVEAGPGARNVPFVYWLDED 307



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 16/108 (14%)

Query: 348 SYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           + ++   SP G+ +A  +            + ++++DG Q R L    ++ +  WSP G+
Sbjct: 32  NLYNLRLSPDGEWVALIRAYTPERLDPPNQLWLVRRDGRQMRFL--GPSIGSADWSPDGK 89

Query: 403 SLIFSRKKDGDTGSKLYSIDL--------NGRNETLINTPAYASDPQW 442
            L  +  +       + ++DL         G +  L++ P  AS P W
Sbjct: 90  RLALTYHRGLCCDVHVVTLDLESGQVAVWTGADTLLLSHPT-ASFPHW 136


>gi|209525420|ref|ZP_03273960.1| WD-40 repeat protein [Arthrospira maxima CS-328]
 gi|209494100|gb|EDZ94415.1| WD-40 repeat protein [Arthrospira maxima CS-328]
          Length = 738

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/335 (13%), Positives = 97/335 (28%), Gaps = 48/335 (14%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            V      +  V        +LWD++   ++                H  S+D+      
Sbjct: 286 AVAIAPDGKRAVSASRDKTLKLWDLETGTELATLT-----------GH--SNDVNAVAIA 332

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G          +  VS     +L + D +              +     +P+ ++   
Sbjct: 333 PDG----------KRAVSASDDKTLKLWDLETGTELATLTGHSGWVKAVAIAPDGKRAVS 382

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-----QKDEAMD 283
           A+ D      + L D         +     ++ A   + +GKRA+ +       +D  + 
Sbjct: 383 ASEDK----TLKLWDLETGTELATLTGHSGLVWAVAITPDGKRAVSASGSLFGSEDNTLK 438

Query: 284 IYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++  DL++      LT       + + +PD  + V  S       L +       +    
Sbjct: 439 LW--DLETGTELATLTGHSSSVTAVAIAPDGKRAVSAS---WDTTLKLWDLETGTELATL 493

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                       +P G   A +        +  ++       L     ++ A   +P G+
Sbjct: 494 TGHSGLVNAVAIAPDGKR-AVSASWDTTLKLWDLETGTELATLTGHSDDVNAVAIAPDGK 552

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               +     D   KL+ ++      TL     + 
Sbjct: 553 R---AVSASFDKTLKLWDLETGTELATLTGHSDWV 584



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 80/241 (33%), Gaps = 15/241 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +  VS     +L + D +             ++     +P+ ++   A++D      + L
Sbjct: 468 KRAVSASWDTTLKLWDLETGTELATLTGHSGLVNAVAIAPDGKRAVSASWDT----TLKL 523

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNT 300
            D         +      + A   + +GKR  +S   D+ + ++  DL++      LT  
Sbjct: 524 WDLETGTELATLTGHSDDVNAVAIAPDGKR-AVSASFDKTLKLW--DLETGTELATLTGH 580

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               ++ + +PD  + V  SD    + L +       +                +P G  
Sbjct: 581 SDWVMAVAIAPDGKRAVSASD---DKTLKLWDLETGTELATLTGHSDWVMAVAIAPDGKR 637

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A +        +  ++       L    S + A   +P G+  + +     D   KL+ 
Sbjct: 638 -AVSASGDNTLKLWDLETGTELATLTGHSSRVTAVAIAPDGKRAVSASD---DNTLKLWD 693

Query: 421 I 421
           +
Sbjct: 694 L 694



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 90/262 (34%), Gaps = 19/262 (7%)

Query: 166 ITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           +TG  G  N+  +    +  VS     +L + D +              +     +P+ +
Sbjct: 493 LTGHSGLVNAVAIAPDGKRAVSASWDTTLKLWDLETGTELATLTGHSDDVNAVAIAPDGK 552

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           +   A++D      + L D         +      ++A   + +GKR  +S   D+ + +
Sbjct: 553 RAVSASFDK----TLKLWDLETGTELATLTGHSDWVMAVAIAPDGKR-AVSASDDKTLKL 607

Query: 285 YSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +  DL++      LT      ++ + +PD  + V  S   G   L +       +     
Sbjct: 608 W--DLETGTELATLTGHSDWVMAVAIAPDGKRAVSAS---GDNTLKLWDLETGTELATLT 662

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
              +       +P G   A +        +  ++  G +      ++ + +   +P G +
Sbjct: 663 GHSSRVTAVAIAPDGKR-AVSASDDNTLKLWDLET-GKELATFTGEARMLSCAIAPDGVT 720

Query: 404 LIFSRKKDGDTGSKLYSIDLNG 425
           +       GD    ++ + L G
Sbjct: 721 VA-----AGDEAGVVHFLRLEG 737



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/275 (12%), Positives = 78/275 (28%), Gaps = 15/275 (5%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I        G     I    +  VS     +L + D                +     +P
Sbjct: 148 IRTLTGHSSGVSAVAITPDGKQAVSASFDKTLKLWDLATGLELSTFMGHSSEVNAVAIAP 207

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + ++   A++D      + L D                + A   + +GK+  +S   D  
Sbjct: 208 DGKQAVSASFDK----TLKLWDLATGSQLATFTGHSGSVYAVAITPDGKQ-AVSASGDNT 262

Query: 282 MDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + ++  D  +               + + +PD  + V  S     + L +       +  
Sbjct: 263 LKMW--DFATRNLLATFRGHRGKVRAVAIAPDGKRAVSASR---DKTLKLWDLETGTELA 317

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                         +P G   A +    +   +  ++       L      ++A   +P 
Sbjct: 318 TLTGHSNDVNAVAIAPDGKR-AVSASDDKTLKLWDLETGTELATLTGHSGWVKAVAIAPD 376

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           G+  + + +   D   KL+ ++      TL     
Sbjct: 377 GKRAVSASE---DKTLKLWDLETGTELATLTGHSG 408



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 63/232 (27%), Gaps = 49/232 (21%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRA---------------------------------- 272
               + +    S + A   + +GK+A                                  
Sbjct: 145 GPLIRTLTGHSSGVSAVAITPDGKQAVSASFDKTLKLWDLATGLELSTFMGHSSEVNAVA 204

Query: 273 -------LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
                   +S   D+ + ++ +    +     T       + + +PD  Q V  S   G 
Sbjct: 205 IAPDGKQAVSASFDKTLKLWDL-ATGSQLATFTGHSGSVYAVAITPDGKQAVSAS---GD 260

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             L +      +     +           +P G   A +    +   +  ++       L
Sbjct: 261 NTLKMWDFATRNLLATFRGHRGKVRAVAIAPDGKR-AVSASRDKTLKLWDLETGTELATL 319

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               +++ A   +P G+  + +     D   KL+ ++      TL     + 
Sbjct: 320 TGHSNDVNAVAIAPDGKRAVSASD---DKTLKLWDLETGTELATLTGHSGWV 368



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 79/257 (30%), Gaps = 44/257 (17%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNS-LGAQ-VLVTG------RVIKEGKDRLRV 126
            S + N ++     ++  +       + W+   G +   +TG       V      +  V
Sbjct: 496 HSGLVNAVAIAPDGKRAVSASWDTTLKLWDLETGTELATLTGHSDDVNAVAIAPDGKRAV 555

Query: 127 E------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                   +LWD++   ++                H  SD +        G         
Sbjct: 556 SASFDKTLKLWDLETGTELATLT-----------GH--SDWVMAVAIAPDG--------- 593

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            +  VS     +L + D +              +     +P+ ++   A+ D+     + 
Sbjct: 594 -KRAVSASDDKTLKLWDLETGTELATLTGHSDWVMAVAIAPDGKRAVSASGDN----TLK 648

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L D         +    S + A   + +GKR  +S   D  + ++  DL++         
Sbjct: 649 LWDLETGTELATLTGHSSRVTAVAIAPDGKR-AVSASDDNTLKLW--DLETGKELATFTG 705

Query: 301 LFINISASYSPDSSQIV 317
               +S + +PD   + 
Sbjct: 706 EARMLSCAIAPDGVTVA 722



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 37/131 (28%), Gaps = 8/131 (6%)

Query: 291 SNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                R LT       + + +PD  Q V  S     + L +       +        +  
Sbjct: 144 GGPLIRTLTGHSSGVSAVAITPDGKQAVSASF---DKTLKLWDLATGLELSTFMGHSSEV 200

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +P G   A +    +   +  +              ++ A   +P G+    +  
Sbjct: 201 NAVAIAPDGKQ-AVSASFDKTLKLWDLATGSQLATFTGHSGSVYAVAITPDGKQ---AVS 256

Query: 410 KDGDTGSKLYS 420
             GD   K++ 
Sbjct: 257 ASGDNTLKMWD 267


>gi|320161597|ref|YP_004174822.1| putative S9 family peptidase [Anaerolinea thermophila UNI-1]
 gi|319995451|dbj|BAJ64222.1| putative S9 family peptidase [Anaerolinea thermophila UNI-1]
          Length = 624

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 24/210 (11%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINI 305
              P+ I        +P  S +GK  +          +  VD +     ++L       +
Sbjct: 102 HGTPRPITPPFGACASPVASPDGKWVVFVWSDGIQDVLGIVDSRGQQWPQKLAIGADFYM 161

Query: 306 SASYSPDSSQIVFESDRE-----GKEQLYVMQSNGSDQ-----KRISQDKEASYFDPVWS 355
             ++ P    + +             ++ +    G+       + +  D     F P +S
Sbjct: 162 QPAWHPQGKYLAWVEWNHPHMPWDGSRVMLATLEGTTPVIQHMQVVGGDDHTPTFQPAFS 221

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW---------SPSGRSL 404
           P G  + F +   E   + +        ++L   E ++L  P W         +P  +++
Sbjct: 222 PDGQWLCFVEGGEEWDRLILFHLSSGARQVLYAPEQAHLMVPAWVQGLRTLAWAPDSQAI 281

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              +   G   S L  I L+G+ E +  +P
Sbjct: 282 YVVQNALGQ--SNLSRISLDGKVEFVSTSP 309



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 86/246 (34%), Gaps = 31/246 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALISV 276
           ++ + Q + +        + V    + + R    I + R  +      F+ + +  L  V
Sbjct: 31  WTLDGQFLVWTESRSGQTVPVLCSRSGVRRDLNAIQSLRGGVGYGGGEFNLSEEYLLF-V 89

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           ++D    IY+   Q      +T       S   SPD   +VF      ++ L ++ S G 
Sbjct: 90  ERDGR--IYAQPFQHGTPRPITPPFGACASPVASPDGKWVVFVWSDGIQDVLGIVDSRGQ 147

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-- 394
              +        Y  P W PQG  +A+ +++        M  DGS+  L   +       
Sbjct: 148 QWPQKLAIGADFYMQPAWHPQGKYLAWVEWNHPH-----MPWDGSRVMLATLEGTTPVIQ 202

Query: 395 ---------------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                          P +SP G+ L F   + G+   +L    L+     ++  P  A  
Sbjct: 203 HMQVVGGDDHTPTFQPAFSPDGQWLCFV--EGGEEWDRLILFHLSSGARQVLYAPEQAHL 260

Query: 440 --PQWV 443
             P WV
Sbjct: 261 MVPAWV 266



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 88/276 (31%), Gaps = 24/276 (8%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES----VVSGIIKNSLCVMDRDGAN 202
                R  A        + IT   G   S +          V S  I++ L ++D  G  
Sbjct: 89  VERDGRIYAQPFQHGTPRPITPPFGACASPVASPDGKWVVFVWSDGIQDVLGIVDSRGQQ 148

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTR-----IDRAPKRI 253
                        +P + P  + +A+  ++      D  RV L         I       
Sbjct: 149 WPQKLAIGADFYMQPAWHPQGKYLAWVEWNHPHMPWDGSRVMLATLEGTTPVIQHMQVVG 208

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--------- 304
           G+  +    P FS +G+        +E   +    L S A + L      +         
Sbjct: 209 GDDHTPTFQPAFSPDGQWLCFVEGGEEWDRLILFHLSSGARQVLYAPEQAHLMVPAWVQG 268

Query: 305 -ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + +++PDS  I    +  G+  L  +  +G   + +S            SP+ D++AF
Sbjct: 269 LRTLAWAPDSQAIYVVQNALGQSNLSRISLDG-KVEFVSTSPYTWLSQITVSPKDDVLAF 327

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
              S       V+        L   +S + +P + P
Sbjct: 328 IASSPNTPNQIVILDQHGFHTLAYSESEMISPEFYP 363



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 72/206 (34%), Gaps = 28/206 (13%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-----NATERLTNTLFINISASYSPDSSQIVFE 319
           ++ +G+  + +  +                  NA + L           ++     ++F 
Sbjct: 31  WTLDGQFLVWTESRSGQTVPVLCSRSGVRRDLNAIQSL-RGGVGYGGGEFNLSEEYLLFV 89

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            +R+G  ++Y         + I+     +   PV SP G  + F    G +  +G++   
Sbjct: 90  -ERDG--RIYAQPFQHGTPRPITP-PFGACASPVASPDGKWVVFVWSDGIQDVLGIVDSR 145

Query: 380 GSQ-ERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRN------- 427
           G Q  + L   ++    P W P G+ L +           GS++    L G         
Sbjct: 146 GQQWPQKLAIGADFYMQPAWHPQGKYLAWVEWNHPHMPWDGSRVMLATLEGTTPVIQHMQ 205

Query: 428 ------ETLINTPAYASDPQWVGFMD 447
                  T    PA++ D QW+ F++
Sbjct: 206 VVGGDDHTPTFQPAFSPDGQWLCFVE 231


>gi|324997534|ref|ZP_08118646.1| peptidase S41 [Pseudonocardia sp. P1]
          Length = 326

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 14/166 (8%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D+++  +      RLT       +   SPD + + + S R+G  ++Y    +G    R
Sbjct: 20  EDDVWTAPVAGGRAYRLTADEVPVTAPRISPDGAAVAWTSRRDGMWEVYRTALDGGGVTR 79

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           ++   +AS     W+P+G ++A +       +     +   G   RLL   S   A  + 
Sbjct: 80  LTWWGDASTRAAGWTPEGGVVALSAHDEATARSRAYAVPATGGTPRLLPYGSLT-AVAFQ 138

Query: 399 PSGRSLI-----------FSRKKDGDTGSKLYSIDLNGRNETLINT 433
           P G +++           + R + G  G         G    ++  
Sbjct: 139 PGGPAVLTQVEGGRDAAHWKRYRGGRAGRLWLDAGGTGDFVRVLAG 184



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 71/196 (36%), Gaps = 24/196 (12%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                R+      + APR S +G     + ++D   ++Y   L      RLT     +  
Sbjct: 30  GGRAYRLTADEVPVTAPRISPDGAAVAWTSRRDGMWEVYRTALDGGGVTRLTWWGDASTR 89

Query: 307 AS-YSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA- 362
           A+ ++P+   +   +  +   + + Y + + G   + +      S     + P G  +  
Sbjct: 90  AAGWTPEGGVVALSAHDEATARSRAYAVPATGGTPRLL---PYGSLTAVAFQPGGPAVLT 146

Query: 363 ----------FTKFSGEKFAIGVMKKDGSQ--ERLLVE-DSNLQAPTW--SPSGRSLIFS 407
                     + ++ G +     +   G+    R+L   D  L++P    +P G  L F 
Sbjct: 147 QVEGGRDAAHWKRYRGGRAGRLWLDAGGTGDFVRVLAGLDGQLESPMVVDTPGGARLAFV 206

Query: 408 RKKDGDTGSKLYSIDL 423
              +G     +YS+ L
Sbjct: 207 SDHEG--WGNVYSVPL 220



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 70/259 (27%), Gaps = 68/259 (26%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +      G     LT   +  +  PR SP+   VA+ +  D  +  VY          +
Sbjct: 22  DVWTAPVAGGRAYRLTAD-EVPVTAPRISPDGAAVAWTSRRDG-MWEVYRTALDGGGVTR 79

Query: 252 RIGNFRSMILAPRFSSNGKRALISV--QKDEAMDIYSVDLQSNATE-------------- 295
                 +   A  ++  G    +S   +       Y+V                      
Sbjct: 80  LTWWGDASTRAAGWTPEGGVVALSAHDEATARSRAYAVPATGGTPRLLPYGSLTAVAFQP 139

Query: 296 ----RLTNTLFINISASY---------------------------------------SPD 312
                LT       +A +                                       +P 
Sbjct: 140 GGPAVLTQVEGGRDAAHWKRYRGGRAGRLWLDAGGTGDFVRVLAGLDGQLESPMVVDTPG 199

Query: 313 SSQIVFESDREGKEQLYVMQSN--GSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKF 366
            +++ F SD EG   +Y +     GSD +R +          ++    S  G  + + + 
Sbjct: 200 GARLAFVSDHEGWGNVYSVPLADPGSDLRRHTDHGAGGAVPDFYARHASTDGRRVVY-EC 258

Query: 367 SGEKFAIGVMKKDGSQERL 385
           +GE F +  +       R+
Sbjct: 259 AGEIFLLDGLDAGSRPRRI 277



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             G   RL  ++  + AP  SP G ++ ++ ++DG    ++Y   L+G   T +     A
Sbjct: 29  AGGRAYRLTADEVPVTAPRISPDGAAVAWTSRRDGMW--EVYRTALDGGGVTRLTWWGDA 86

Query: 438 SDPQ--WVG 444
           S     W  
Sbjct: 87  STRAAGWTP 95


>gi|213582019|ref|ZP_03363845.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 91

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 3/93 (3%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           S  G  +     +  +  I          ++L      + P+ +P+G  +I+S  +    
Sbjct: 1   SSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG--M 58

Query: 415 GSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
           GS L  +  +GR +  L  T      P W  ++
Sbjct: 59  GSVLNLVSTDGRFKARLPATDGQVKSPAWSPYL 91



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 3/91 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S D   +V  S   G++ +          + +S         P  +P G ++ ++   G 
Sbjct: 1   SSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSSTF--LDETPSLAPNGTMVIYSSSQGM 58

Query: 370 KFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
              + ++  DG  + RL   D  +++P WSP
Sbjct: 59  GSVLNLVSTDGRFKARLPATDGQVKSPAWSP 89



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 45/91 (49%), Gaps = 2/91 (2%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           SS+GK  ++    +    I   DL +   + L++T F++ + S +P+ + +++ S +   
Sbjct: 1   SSDGKFMVMVSSNNGQQHIAKQDLVTGGVQVLSST-FLDETPSLAPNGTMVIYSSSQGMG 59

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             L ++ ++G  + R+    +     P WSP
Sbjct: 60  SVLNLVSTDGRFKARL-PATDGQVKSPAWSP 89



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/92 (13%), Positives = 30/92 (32%), Gaps = 3/92 (3%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + +   +      +  + ++    +     ++ +   +   P  + NG   + S  + 
Sbjct: 1   SSDGK---FMVMVSSNNGQQHIAKQDLVTGGVQVLSSTFLDETPSLAPNGTMVIYSSSQG 57

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSP 311
               +  V        RL  T     S ++SP
Sbjct: 58  MGSVLNLVSTDGRFKARLPATDGQVKSPAWSP 89


>gi|163752106|ref|ZP_02159312.1| peptidase, putative [Shewanella benthica KT99]
 gi|161327998|gb|EDP99172.1| peptidase, putative [Shewanella benthica KT99]
          Length = 683

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 92/259 (35%), Gaps = 26/259 (10%)

Query: 214 LFEPRFSPNQQKVAY----ATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSN 268
           L+    S +   + +         +    +Y+ D T++   PK++        +  FS++
Sbjct: 38  LYSSALSNDGNNIVFGIKKTDTKGKASSDIYIQDLTQMGSKPKQLTFAAGTEHSAVFSAD 97

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +       +D +  +Y + L      ++++          S D  Q+V         Q 
Sbjct: 98  DQSVYFLASRDGSSQLYQLPLTGGEARQVSDLPLDVEGFKLSQDGKQVVLNMRVFPDCQD 157

Query: 329 YVMQSN--GSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGS 381
                +   ++ +R S  +E           WS       F    +G+K    V    G 
Sbjct: 158 LQCSEDKFTAEAERKSTGREYKQLMIRHWDTWSDHSRSHLFVAQLNGDKITTAVDVTAGL 217

Query: 382 QERLLVED-SNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNG--------RN 427
                 +  S ++  T++P G+ +++S K   +     T   L+ + + G         N
Sbjct: 218 DTETPPKPFSGMEEVTFTPDGKYVVYSAKAPSNDQAWITNYDLWQVPVTGGDAVNLTESN 277

Query: 428 ETLINTPAYASDPQWVGFM 446
           +     P Y++D +++ ++
Sbjct: 278 KAWDAHPTYSADGRYLAYL 296



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/337 (12%), Positives = 105/337 (31%), Gaps = 74/337 (21%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRD--GANIRYLTPSRDQILFEPRFSPNQQKVA 227
             D N+ +  + ++   G   + + + D    G+  + LT           FS + Q V 
Sbjct: 44  SNDGNNIVFGIKKTDTKGKASSDIYIQDLTQMGSKPKQLT-FAAGTEHSAVFSADDQSVY 102

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------------- 274
           +      D               +++ +    +   + S +GK+ ++             
Sbjct: 103 FLA--SRDGSSQLYQLPLTGGEARQVSDLPLDVEGFKLSQDGKQVVLNMRVFPDCQDLQC 160

Query: 275 ---------------------------SVQKDEAMDIYSVDLQSNATER---LTNTLFIN 304
                                      +        ++   L  +       +T  L   
Sbjct: 161 SEDKFTAEAERKSTGREYKQLMIRHWDTWSDHSRSHLFVAQLNGDKITTAVDVTAGLDTE 220

Query: 305 ISA---------SYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQKRISQDKEAS 348
                       +++PD   +V+ +     +Q ++   +       G D   +++  +A 
Sbjct: 221 TPPKPFSGMEEVTFTPDGKYVVYSAKAPSNDQAWITNYDLWQVPVTGGDAVNLTESNKAW 280

Query: 349 YFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSG 401
              P +S  G  +A+       F  +++ I +      QE+ +    D +  + T+    
Sbjct: 281 DAHPTYSADGRYLAYLAMTKPGFEADRYRIMLRDIVTGQEKEVAPLWDRSASSLTFGKDN 340

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYA 437
           R+L  + +  G     ++ ++   G  +TL N  + +
Sbjct: 341 RTLYVTAQDVGQVT--IFEVNTQFGDVKTLYNEGSNS 375



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 45/144 (31%), Gaps = 4/144 (2%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G +         +  + I    L  +   G +   LT S       P +S + 
Sbjct: 231 EVTFTPDGKYVVYSAKAPSNDQAWITNYDLWQVPVTGGDAVNLTESNKAWDAHPTYSADG 290

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D  R+ L D    +  +    +     +  F  + +   ++ Q  
Sbjct: 291 RYLAYLAMTKPGFEADRYRIMLRDIVTGQEKEVAPLWDRSASSLTFGKDNRTLYVTAQDV 350

Query: 280 EAMDIYSVDLQSNATERLTNTLFI 303
             + I+ V+ Q    + L N    
Sbjct: 351 GQVTIFEVNTQFGDVKTLYNEGSN 374


>gi|50123323|ref|YP_052490.1| hypothetical protein ECA4405 [Pectobacterium atrosepticum SCRI1043]
 gi|49613849|emb|CAG77301.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 428

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 54/147 (36%), Gaps = 18/147 (12%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   SPD S+I F   D  G  QL+
Sbjct: 274 GTATSMPAPPAGVQQRRLTFTHQRCYPGLVNQPRHWLRASPDGSEIAFLMRDEIGVVQLW 333

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +  NG + +++++ +        W P G  +AF   +    +I +      +   L   
Sbjct: 334 TISPNGGEPRQVTRTEHGVQSAFNWHPDGGSLAFVCDN----SIMLCDAKSGELVRLSAR 389

Query: 390 SNL----QAPTWSPSGRSLIFSRKKDG 412
           ++      A  +SP G+ + + R+ DG
Sbjct: 390 TDCAPSADAVVFSPDGKHIAYMREIDG 416



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 51/129 (39%), Gaps = 12/129 (9%)

Query: 256 FRSMILAPR-F---SSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTL-FINISASY 309
           +  ++  PR +   S +G      ++ +   + ++++        ++T T   +  + ++
Sbjct: 299 YPGLVNQPRHWLRASPDGSEIAFLMRDEIGVVQLWTISPNGGEPRQVTRTEHGVQSAFNW 358

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFS 367
            PD   + F  D      + +  +   +  R+S   +   S    V+SP G  IA+ +  
Sbjct: 359 HPDGGSLAFVCDNS----IMLCDAKSGELVRLSARTDCAPSADAVVFSPDGKHIAYMREI 414

Query: 368 GEKFAIGVM 376
                + V+
Sbjct: 415 DGFNQLFVV 423



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 48/126 (38%), Gaps = 11/126 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +Q     R SP+  ++A+   D+  +++++ +        +       +  A  +  +G 
Sbjct: 304 NQPRHWLRASPDGSEIAFLMRDEIGVVQLWTISPNGGEPRQVTRTEHGVQSAFNWHPDGG 363

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-----YSPDSSQIVFESDREGK 325
                        I   D +S    RL+     + + S     +SPD   I +  + +G 
Sbjct: 364 SLAFVCDNS----IMLCDAKSGELVRLSART--DCAPSADAVVFSPDGKHIAYMREIDGF 417

Query: 326 EQLYVM 331
            QL+V+
Sbjct: 418 NQLFVV 423



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 7/98 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +  +G   R +T +   +     + P+   +A+   +      + L D +     +
Sbjct: 331 QLWTISPNGGEPRQVTRTEHGVQSAFNWHPDGGSLAFVCDN-----SIMLCDAKSGELVR 385

Query: 252 RI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                +      A  FS +GK      + D    ++ V
Sbjct: 386 LSARTDCAPSADAVVFSPDGKHIAYMREIDGFNQLFVV 423


>gi|271967555|ref|YP_003341751.1| acylaminoacyl-peptidase [Streptosporangium roseum DSM 43021]
 gi|270510730|gb|ACZ89008.1| Acylaminoacyl-peptidase [Streptosporangium roseum DSM 43021]
          Length = 641

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 74/217 (34%), Gaps = 24/217 (11%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNA 293
           D  R  L     D  P +   F     +PR S +G        Q      ++ +      
Sbjct: 44  DAYRGGLWRLPQDGPPVQFT-FGDHDSSPRISPDGAWVAFLRAQDGGRPQLHVMPTGGGE 102

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV---MQSNGSDQKRISQDKEASYF 350
              LT+      +  ++PDS +I F +      +      + +     +RI+  +     
Sbjct: 103 ARPLTDLPLGAGAPVWAPDSRRIAFVARVPEAGRYGTEEDVSAAAEAPRRITGFRYRHDG 162

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMK--KDGSQERLLVEDSN-LQAPTWSPSGRSLIFS 407
                     + FT       A+ V+    D  Q   L E    + +P+W+P G  ++ S
Sbjct: 163 ----------VGFTL--DRWPALFVVNALADIPQPVRLTEGPYEVASPSWTPDGEHVLVS 210

Query: 408 RKKDGDTG---SKLYSIDL-NGRNETLINTPAYASDP 440
             +D D     S LY++    G    ++ +   A  P
Sbjct: 211 ADRDLDGESLHSDLYAVPAGGGAPIPVVRSAGSAGLP 247



 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 80/238 (33%), Gaps = 27/238 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   +  L  + +DG  +++     D     PR SP+   VA+    D    ++++M T 
Sbjct: 43  ADAYRGGLWRLPQDGPPVQFTFGDHDS---SPRISPDGAWVAFLRAQDGGRPQLHVMPTG 99

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS---VDLQSNATERLTNTLF 302
                + + +      AP ++ + +R     +  EA    +   V   + A  R+T    
Sbjct: 100 -GGEARPLTDLPLGAGAPVWAPDSRRIAFVARVPEAGRYGTEEDVSAAAEAPRRIT---- 154

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 Y  D     F  DR     L+V+   ++     R++ +       P W+P G+ 
Sbjct: 155 ---GFRYRHDGVG--FTLDR--WPALFVVNALADIPQPVRLT-EGPYEVASPSWTPDGEH 206

Query: 361 IAFTKFSGEK-----FAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG 412
           +  +             +  +   G     +V    +   P   P G  L       G
Sbjct: 207 VLVSADRDLDGESLHSDLYAVPAGGGAPIPVVRSAGSAGLPVALPGGDVLYLGTAFSG 264


>gi|255535449|ref|YP_003095820.1| Fibronectin, type III domain protein [Flavobacteriaceae bacterium
           3519-10]
 gi|255341645|gb|ACU07758.1| Fibronectin, type III domain protein [Flavobacteriaceae bacterium
           3519-10]
          Length = 497

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 105/310 (33%), Gaps = 31/310 (10%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           T+ D +  ++      F +  +  +       +  +  ++  + AN  +         + 
Sbjct: 194 TVDDGVNPAVNSPVFRFKTSAIPNNRFHYVKKMDGNYYIVSSNEANTNFQFTPISANSWR 253

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR----IGNFRSMILAPRFSSNGKRA 272
           PR S N   +A+         +++       +  +     +  F +      +S+NGK  
Sbjct: 254 PRLSQNAGLIAFLR-TVGGSAQIFTAKPDGSQPFQVTTIPVSGFNNAETDFSWSTNGKEF 312

Query: 273 LISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVF-ESDREG-KEQL 328
           L          +Y ++   +  E +  T          +S D S+I    +D  G   ++
Sbjct: 313 LY----PSFSKLYKINKDGSGLELIYTTTDGSFISECDWSYDGSKIAIKTNDPNGYNAKI 368

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---------KFSGEKFAIGVMKKD 379
            V+   G+  K + ++   +     +S  G+L+ +T          +      I +    
Sbjct: 369 LVIDMQGNTVKTVLENVAGAVGGLNFSVDGNLLLYTYDISGHQDNSYRQLNTHIFIYNLT 428

Query: 380 GSQERLLV------EDSNLQAPTWSPSGRSLIFS-RKKDGDTGSKLYSIDLNGRNETLIN 432
                 +       + SN   P +SP+   +IF+    DG +   +  I L     T + 
Sbjct: 429 NDVRTNISLASEKPDGSNDLDPRFSPNNAEIIFTNTSNDGISVKNILKITLQDNERTALF 488

Query: 433 TPAYASDPQW 442
           + A    P W
Sbjct: 489 SDAE--MPDW 496



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 55/136 (40%), Gaps = 17/136 (12%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +    +G    Y++ SN ++         A+ + P  S    LIAF +  G    I   K
Sbjct: 222 YVKKMDGNY--YIVSSNEANTNFQFTPISANSWRPRLSQNAGLIAFLRTVGGSAQIFTAK 279

Query: 378 KDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            DGSQ   +        ++     +WS +G+  ++       + SKLY I+ +G    LI
Sbjct: 280 PDGSQPFQVTTIPVSGFNNAETDFSWSTNGKEFLY------PSFSKLYKINKDGSGLELI 333

Query: 432 NT---PAYASDPQWVG 444
            T    ++ S+  W  
Sbjct: 334 YTTTDGSFISECDWSY 349


>gi|119490041|ref|ZP_01622665.1| WD-repeat protein [Lyngbya sp. PCC 8106]
 gi|119454193|gb|EAW35345.1| WD-repeat protein [Lyngbya sp. PCC 8106]
          Length = 1224

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 50/300 (16%), Positives = 99/300 (33%), Gaps = 37/300 (12%)

Query: 129  RLWDVKDRK-------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG-------DFN 174
            RLWD++  +        +      +     + +A +  D   +    + G        F 
Sbjct: 796  RLWDIESGQCFQSLEGHLDSVWAVAFSRDGQLLASSSDDQTVKVWQTKTGSCLKTLKGFE 855

Query: 175  SRILFVSESV-----VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            S++  V+ S       +G  +  + + D   G  +R L       ++    SP+ + +A 
Sbjct: 856  SQVCSVAFSQDDQILATGSQEQMVQLWDIATGQRLRTL-RGHKHQVWSFVLSPDGKTLAT 914

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + D     RV L D    R  KR       + +  FS NG+    S   D  + ++  D
Sbjct: 915  GSDDH----RVRLWDIHAGRCIKRFSGHSDWVWSVCFSPNGRMLA-SGSYDSTVKLW--D 967

Query: 289  LQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
              +    +  +     I    +S D   +   SD    + + V      +          
Sbjct: 968  TDTGEALKTLHGHSDRIETVVFSGDGKLLASASD---DQTVRVWDVQTGECLHTLTGHSR 1024

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLI 405
                  +SP G ++A         ++ +      +    +E    +     +SP G+SL 
Sbjct: 1025 WVGVVAFSPDGQILASGSHD---HSLKLWDIQTGKCLQTLEGHFQRIDLLAFSPDGQSLA 1081



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 104/312 (33%), Gaps = 16/312 (5%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD- 172
           G+++  G D   V  R+WDV     +  +         R +  +  + I  S + ++   
Sbjct: 673 GQMLASGSDDRTV--RVWDVNSGGCL--QVLTGHREGIRTVIFSPDNSIVASSSDDQTVR 728

Query: 173 -FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            ++ +      +       N      ++G     L     Q L       +  K+++   
Sbjct: 729 LWSIQTGECLRTFTGNSTWNWTVAFIKEGTENSQLKNGNCQNLTLVNSEFDLSKISWIAS 788

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              D   V L D    +  + +      + A  FS +G+    S   D+ + ++      
Sbjct: 789 SC-DENTVRLWDIESGQCFQSLEGHLDSVWAVAFSRDGQLLA-SSSDDQTVKVWQT-KTG 845

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           +  + L        S ++S D   +   S     + + +       + R  +  +   + 
Sbjct: 846 SCLKTLKGFESQVCSVAFSQDDQILATGSQE---QMVQLWDIATGQRLRTLRGHKHQVWS 902

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            V SP G  +A T     +  +  +      +R       + +  +SP+GR L       
Sbjct: 903 FVLSPDGKTLA-TGSDDHRVRLWDIHAGRCIKRFSGHSDWVWSVCFSPNGRMLASGSY-- 959

Query: 412 GDTGSKLYSIDL 423
            D+  KL+  D 
Sbjct: 960 -DSTVKLWDTDT 970



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 56/336 (16%), Positives = 103/336 (30%), Gaps = 50/336 (14%)

Query: 109  QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            Q+L TG   +          +LWD+   +++          + R   H     ++  +  
Sbjct: 868  QILATGSQEQM--------VQLWDIATGQRL---------RTLRGHKH----QVWSFVLS 906

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              G          +++ +G   + + + D                ++   FSPN + +A 
Sbjct: 907  PDG----------KTLATGSDDHRVRLWDIHAGRCIKRFSGHSDWVWSVCFSPNGRMLAS 956

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +YD      V L DT    A K +      I    FS +GK    S   D+ + ++  D
Sbjct: 957  GSYDS----TVKLWDTDTGEALKTLHGHSDRIETVVFSGDGKLLA-SASDDQTVRVW--D 1009

Query: 289  LQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +Q+      LT         ++SPD   +   S       L +         +  +    
Sbjct: 1010 VQTGECLHTLTGHSRWVGVVAFSPDGQILASGSH---DHSLKLWDIQTGKCLQTLEGHFQ 1066

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                  +SP G  +A            V        RL+  +       W      L   
Sbjct: 1067 RIDLLAFSPDGQSLASGSHDCTVKVWDVCTGKCQNSRLVESEHLQALMFW--DEGQLWVG 1124

Query: 408  RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
               +G+   +L+ +   G    +    A    P W 
Sbjct: 1125 GSNEGEV--RLWDVK-TGECVRMF---ADQDSPVWS 1154



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 60/174 (34%), Gaps = 10/174 (5%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              ++ +G     + + + +      +   + + +    FSP    +A  + D      V
Sbjct: 588 PQNTLATGDADGKILLWNSEQGQKLLVFQGKTKGVKSIVFSPEGNLIASGSDDQ----TV 643

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            +          R    +  I    FSS+G+    S   D  + ++ V+      + LT 
Sbjct: 644 RIWKVSTGECLDRWSGHQETIKCVNFSSDGQMLA-SGSDDRTVRVWDVN-SGGCLQVLTG 701

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                 +  +SPD+S +   SD    + + +      +  R +    +++   V
Sbjct: 702 HREGIRTVIFSPDNSIVASSSD---DQTVRLWSIQTGECLR-TFTGNSTWNWTV 751


>gi|42524720|ref|NP_970100.1| putative TolB protein [Bdellovibrio bacteriovorus HD100]
 gi|39576930|emb|CAE78159.1| putative TolB protein [Bdellovibrio bacteriovorus HD100]
          Length = 1281

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 53/346 (15%), Positives = 117/346 (33%), Gaps = 34/346 (9%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +D         K        W+KI+  ++   Y ++       +S  + +S  + +  + 
Sbjct: 245 FDTA-GNISETKSVTIRYPQWQKISPDVTSTGYPAVRQIAQYGDSGRVLLSSPLRNDDMV 303

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRI 246
             L +++ DG  +  + P   Q   +   +    P   +  Y  +    +    L   +I
Sbjct: 304 -DLGLVNFDGTGLTRINPMSGQWGLDQTSAITPVPKHSRALYVRFTIGRVQLKELHSVKI 362

Query: 247 DRAPKRIG------NFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATERL 297
           D +  R+       N    +     + +    +        D   ++Y++++ + A  +L
Sbjct: 363 DGSGDRVLMGPTSVNPTGGVTTYALTPDQNTVIAIGDVGPTDNEFNLYAINVLTGAQTKL 422

Query: 298 ---TNTLFINISASYSPDSSQIVFESDREGKEQL--YVMQSNGSDQKRISQ---DKEASY 349
                          SPD S +VF  D++  E +  Y +  NG++ +R+       EA  
Sbjct: 423 NGAMVAGGDVREFRISPDGSTVVFRMDKDIDEAINLYAVNVNGTNLRRLGPAMATNEAVQ 482

Query: 350 FDPVWSPQGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRS 403
            D + S     + +     F+    A+G +     +   +   S          SP+ R 
Sbjct: 483 SDYIISADSKWVVYRENKTFNNVGMALGAVSLVTGEVIDVSATSFNGVSAMAEISPNSRY 542

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTP-----AYASDPQWVG 444
           + +   +   T  +++  DL  R +  +  P            W  
Sbjct: 543 VAYRIDRGMATCLEMWVYDLQARTDNRVTVPCTATTMDVGSFVWSP 588



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 81/216 (37%), Gaps = 19/216 (8%)

Query: 165  SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT---PSRDQILFEPRFSP 221
                      +++ F     V   +   L   D +G+N+  +T   P+    L    F+ 
Sbjct: 799  YFFVPPPASGTKVAFRGNPEVDAEMH--LYASDPNGSNLVRVTKAYPAGGGKLTTFAFTD 856

Query: 222  NQQKVAY-ATYDDEDILRVYLMDTRIDRAPKR---IGNFRSMILAPRFSSNGKRALIS-- 275
            +  K+ Y A  D   +  +Y+ ++      K    I N    I A +F+   ++      
Sbjct: 857  DGTKIIYLADQDTSGLQELYVGNSNGAAPVKVSVPITNPNGAITAFKFNEATQKLYYIGD 916

Query: 276  VQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIV--FESDREGKEQLYV 330
            +  D   +I+ V+L      ++T       I      +PD S IV  ++ D + K ++  
Sbjct: 917  ITVDTIPEIHRVNLDGTGAVKITPDFAHPVIYTDWDVAPDGSYIVVRWDYDIDAKWEIGK 976

Query: 331  MQSNGSD-QKRISQDKEASY--FDPVWSPQGDLIAF 363
            +  +GS    RI+    A Y     V SP    + +
Sbjct: 977  VAVDGSGTVTRINSVIAAGYDLASFVISPDSQWVCY 1012



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 88/310 (28%), Gaps = 60/310 (19%)

Query: 188 IIKNSLCVMDRDGANIRYLTP-------SRDQIL-FEPRFSPNQQKVAYATYDDE----- 234
             +  L + + DG  +  L+            I      F+ N QK+ +           
Sbjct: 601 SYRFDLHIANPDGTGLLRLSTTTVVRNGGHQGIEKNTINFTGNGQKIIWQADVSGISPPA 660

Query: 235 -DILRVYLMDTRIDRAPKRIGNFRSMILAPR-------FSSNGKRALIS--VQKDEAMDI 284
              ++  L+    D +   +        +          S +G R      ++ D   ++
Sbjct: 661 VGEMKYDLLAINADGSGTPVLLTPQAQASVVRNYPVLEVSPSGDRVAYIADLEVDGKYEM 720

Query: 285 YSVDLQSNATERLTNTLFINISASYSP-DSS------QIVFESDRE-----------GKE 326
           Y   +  ++  RL        S   S  D        Q  F+ DR               
Sbjct: 721 YISAVDGSSNRRL--------SPVISNLDGDVLTGNLQYFFDWDRSTVMMLADDNIEAVN 772

Query: 327 QLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDG 380
            LY    N +    +  +    +   YF       G  +AF        +  +     +G
Sbjct: 773 GLYRASLNLAVSSSVKINMPLIRSGDYFFVPPPASGTKVAFRGNPEVDAEMHLYASDPNG 832

Query: 381 SQERLLVE-----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           S    + +        L    ++  G  +I+   +D     +LY  + NG     ++ P 
Sbjct: 833 SNLVRVTKAYPAGGGKLTTFAFTDDGTKIIYLADQDTSGLQELYVGNSNGAAPVKVSVPI 892

Query: 436 YASDPQWVGF 445
              +     F
Sbjct: 893 TNPNGAITAF 902



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 36/272 (13%), Positives = 85/272 (31%), Gaps = 30/272 (11%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYAT-YDDEDILRVYLMDTRIDR 248
             +  ++ DG     +TP     +    +  +P+   +     YD +    +  +      
Sbjct: 924  EIHRVNLDGTGAVKITPDFAHPVIYTDWDVAPDGSYIVVRWDYDIDAKWEIGKVAVDGSG 983

Query: 249  APKRIGNF--RSMILAP-RFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFI 303
               RI +       LA    S + +              D+      + A         +
Sbjct: 984  TVTRINSVIAAGYDLASFVISPDSQWVCYWGITSVSGVYDVKVASAANPAGVNYMAAQGV 1043

Query: 304  N-----ISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-- 354
            +         +S DS   V   D    G+  L   + +   Q  I+    A+    ++  
Sbjct: 1044 DPTRMGSGCRFSEDSEYAVIPGDFVTNGRTSLKTFRLSDQVQFDINPGLPATSHTSLYQT 1103

Query: 355  ---SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG---------- 401
                    LI  ++ S + + +  M  DGS  R + ++        + +G          
Sbjct: 1104 LTEGANKRLITLSESSPDIYELYSMNLDGSDIRKISQNPIAGGQVNANNGTSVKFLNDAN 1163

Query: 402  RSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            ++++++   +      L+++  +G     + T
Sbjct: 1164 KTIVYTGLIETVGKWDLFAVKWDGTESRKLVT 1195



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 104/289 (35%), Gaps = 45/289 (15%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQ---ILFEPR--FSPNQQKVAY-ATYDDEDILRVY 240
           G +K  L  ++ DG+    L   + Q   +   P    SP+  +VAY A  + +    +Y
Sbjct: 662 GEMKYDLLAINADGSGTPVLLTPQAQASVVRNYPVLEVSPSGDRVAYIADLEVDGKYEMY 721

Query: 241 LMDTRIDRAPK---RIGNFRSMILAP--RFSSNGKRALISVQKDEAMDI------YSVDL 289
           +         +    I N    +L    ++  +  R+ + +  D+ ++        S++L
Sbjct: 722 ISAVDGSSNRRLSPVISNLDGDVLTGNLQYFFDWDRSTVMMLADDNIEAVNGLYRASLNL 781

Query: 290 QSNATERLTNTLFINISASYSP---DSSQIVFESDR--EGKEQLYVMQSNGSDQKRIS-- 342
             +++ ++   L  +    + P     +++ F  +   + +  LY    NGS+  R++  
Sbjct: 782 AVSSSVKINMPLIRSGDYFFVPPPASGTKVAFRGNPEVDAEMHLYASDPNGSNLVRVTKA 841

Query: 343 -QDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                       ++  G  I +           + V   +G+    +            P
Sbjct: 842 YPAGGGKLTTFAFTDDGTKIIYLADQDTSGLQELYVGNSNGAAPVKVSVPITN------P 895

Query: 400 SG-----------RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           +G           + L +      DT  +++ ++L+G     I TP +A
Sbjct: 896 NGAITAFKFNEATQKLYYIGDITVDTIPEIHRVNLDGTGAVKI-TPDFA 943



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 52/280 (18%), Positives = 96/280 (34%), Gaps = 51/280 (18%)

Query: 190  KNSLCVMDRDGANIRYLTPS---RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            K  +  +  DG+       S       L     SP+ Q V Y  +    +  VY +    
Sbjct: 971  KWEIGKVAVDGSGTVTRINSVIAAGYDLASFVISPDSQWVCY--WGITSVSGVYDVKVAS 1028

Query: 247  DRAPKRIGNFRSMILAP-------RFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLT 298
               P  +    +  + P       RFS + + A+I          +  + +++  T RL+
Sbjct: 1029 AANPAGVNYMAAQGVDPTRMGSGCRFSEDSEYAVI-------PGDFVTNGRTSLKTFRLS 1081

Query: 299  NTLFINISASYSPDSSQIVFESDREGKE--------------QLYVMQSNGSDQKRISQD 344
            + +  +I+      S   ++++  EG                +LY M  +GSD ++ISQ+
Sbjct: 1082 DQVQFDINPGLPATSHTSLYQTLTEGANKRLITLSESSPDIYELYSMNLDGSDIRKISQN 1141

Query: 345  K--------EASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVE-----D 389
                              +     I +T    +  K+ +  +K DG++ R LV      D
Sbjct: 1142 PIAGGQVNANNGTSVKFLNDANKTIVYTGLIETVGKWDLFAVKWDGTESRKLVTLNSFAD 1201

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                  +       + F    D D    LYS+  +G    
Sbjct: 1202 IYDTFVSELAD--RVFFRADNDKDGVLSLYSVKGDGTGLK 1239


>gi|75909287|ref|YP_323583.1| peptidase C14 [Anabaena variabilis ATCC 29413]
 gi|75703012|gb|ABA22688.1| Peptidase C14, caspase catalytic subunit p20 [Anabaena variabilis
            ATCC 29413]
          Length = 1760

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 85/243 (34%), Gaps = 14/243 (5%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ +    N++ + +     +          +    F P+ Q +A  + D      + +
Sbjct: 1502 KTIATASADNTIKLWNSKTQQLIKTLTGHKDRVTSLSFHPDNQTIASGSADK----TIKI 1557

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                  +  + +      +++  +S +G+    S   D  + I+  D      + LT   
Sbjct: 1558 WQINNGQLLRTLTGHNDEVISIDYSPDGQFLA-SGSADNTVKIWQTD--GTLIKNLTGHG 1614

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S  +SPDS  +   S       + + Q                     +SP G+++
Sbjct: 1615 LAIASVKFSPDSQTLASAS---WDNTIKLWQVTDGKLINNLSAHTDGVTSLSFSPDGEIL 1671

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            A +  +     +  +      + LL     +    +SP G++L+       D G  ++++
Sbjct: 1672 A-SGSADNTIKLWNLPHATLLKTLLGHPGKINTLAFSPDGKTLL---SGGEDAGVMVWNL 1727

Query: 422  DLN 424
            DL+
Sbjct: 1728 DLD 1730



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 82/220 (37%), Gaps = 17/220 (7%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            S+   +    F+P+    A A +D    + ++  +     +  +I   +++I    +S +
Sbjct: 1443 SKTSNVNSISFNPDGTTFASAGWD--GNITIWQREKLARSSLSKIQTNQNIITTISYSHD 1500

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            GK    +   D  + ++  + ++    + LT       S S+ PD+  I   S     + 
Sbjct: 1501 GKTIA-TASADNTIKLW--NSKTQQLIKTLTGHKDRVTSLSFHPDNQTIASGS---ADKT 1554

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            + + Q N     R             +SP G  +A          + + + DG+  + L 
Sbjct: 1555 IKIWQINNGQLLRTLTGHNDEVISIDYSPDGQFLASGSADNT---VKIWQTDGTLIKNLT 1611

Query: 388  EDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                  A   +SP  ++L  +     D   KL+ +  +G+
Sbjct: 1612 GHGLAIASVKFSPDSQTLASASW---DNTIKLWQV-TDGK 1647



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 101/267 (37%), Gaps = 26/267 (9%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S+++ S  +  ++ +   DG+ I     + +  +    F P+ + +        +   V 
Sbjct: 1256 SKTIASSSLDKTIKIWRFDGSIINTW-NAHNSWVNSIDFRPDGKIIV----SGGEDNLVQ 1310

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            L      +  K +   +  I + +FS +  + L S   D+ +  +    +    + +   
Sbjct: 1311 LWQVTNGQLIKTLAGHKERITSVKFSPD-SKILASASGDKTIKFW--HTEGKFLKTIAAH 1367

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++S DS  +V          + V + +G+  K I    E    D  +SP    
Sbjct: 1368 NQQVNSINFSSDSKILV---SAGADSTIKVWKIDGTLIKTIPGRGEQ-IRDVTFSPDNKF 1423

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS---- 416
            IA +  + +   I  +           + SN+ + +++P G +   S   DG+       
Sbjct: 1424 IA-SASNDKTVRIWQLN------YQESKTSNVNSISFNPDGTTFA-SAGWDGNITIWQRE 1475

Query: 417  KLYSIDLNG--RNETLINTPAYASDPQ 441
            KL    L+    N+ +I T +Y+ D +
Sbjct: 1476 KLARSSLSKIQTNQNIITTISYSHDGK 1502



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 52/310 (16%), Positives = 113/310 (36%), Gaps = 33/310 (10%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+V+    D   V  +LWD      I G+   +  AS +++   I+              
Sbjct: 1162 GKVLASASDDRTV--KLWD------IHGQLITTIAASQKRVT-AIAVSRNGKYFAIANAD 1212

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             +  L+  ++    +     C+       +    P    I+ +  FSP+ + +A ++ D 
Sbjct: 1213 YTIKLYAFDTSCLTLKSLQKCIQ------LIKTFPGHTNIVTDVVFSPDSKTIASSSLD- 1265

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               ++++  D  I           S + +  F  +GK  ++S  +D  + ++ V      
Sbjct: 1266 -KTIKIWRFDGSIINTWNA---HNSWVNSIDFRPDGK-IIVSGGEDNLVQLWQV-TNGQL 1319

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             + L        S  +SPDS  +   S   G + +    + G   K I+           
Sbjct: 1320 IKTLAGHKERITSVKFSPDSKILASAS---GDKTIKFWHTEGKFLKTIA-AHNQQVNSIN 1375

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDG 412
            +S    ++     +G    I V K DG+  + +      ++  T+SP  + +  +     
Sbjct: 1376 FSSDSKILV---SAGADSTIKVWKIDGTLIKTIPGRGEQIRDVTFSPDNKFIASASN--- 1429

Query: 413  DTGSKLYSID 422
            D   +++ ++
Sbjct: 1430 DKTVRIWQLN 1439



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 71/210 (33%), Gaps = 27/210 (12%)

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            +       +   R+ +    + A  FS +GK    S   D  + ++  D+       +  
Sbjct: 1133 FQQAIANTQEINRLQSHAQQVNAVSFSPDGKVLA-SASDDRTVKLW--DIHGQLITTIAA 1189

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--------SQDKEAS-YF 350
            +     + + S +       ++ +   +LY   ++    K +        +     +   
Sbjct: 1190 SQKRVTAIAVSRNGKYFA-IANADYTIKLYAFDTSCLTLKSLQKCIQLIKTFPGHTNIVT 1248

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRK 409
            D V+SP    IA +        I + + DGS        +S + +  + P G+ ++    
Sbjct: 1249 DVVFSPDSKTIASSSLDKT---IKIWRFDGSIINTWNAHNSWVNSIDFRPDGKIIV---S 1302

Query: 410  KDGDTGSKLYSI-------DLNGRNETLIN 432
               D   +L+ +        L G  E + +
Sbjct: 1303 GGEDNLVQLWQVTNGQLIKTLAGHKERITS 1332



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 79/223 (35%), Gaps = 29/223 (13%)

Query: 201  ANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            AN + +    S  Q +    FSP+ + +A A+ D      V L D    +    I   + 
Sbjct: 1138 ANTQEINRLQSHAQQVNAVSFSPDGKVLASASDDR----TVKLWDIH-GQLITTIAASQK 1192

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----------TNTLFINISAS 308
             + A   S NGK   I+   D  + +Y+ D      + L               I     
Sbjct: 1193 RVTAIAVSRNGKYFAIA-NADYTIKLYAFDTSCLTLKSLQKCIQLIKTFPGHTNIVTDVV 1251

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFS 367
            +SPDS  I   S     + + + + +GS     + +   S+ +   + P G +I      
Sbjct: 1252 FSPDSKTIASSSL---DKTIKIWRFDGSIIN--TWNAHNSWVNSIDFRPDGKIIV---SG 1303

Query: 368  GEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSR 408
            GE   + + +    Q    +     +  +  +SP  + L  + 
Sbjct: 1304 GEDNLVQLWQVTNGQLIKTLAGHKERITSVKFSPDSKILASAS 1346


>gi|17230611|ref|NP_487159.1| hypothetical protein alr3119 [Nostoc sp. PCC 7120]
 gi|17132214|dbj|BAB74818.1| alr3119 [Nostoc sp. PCC 7120]
          Length = 676

 Score = 80.8 bits (198), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 52/411 (12%), Positives = 120/411 (29%), Gaps = 81/411 (19%)

Query: 66  SEVVSKDL--QRSDVFNL---ISQDSFKQKITNPD-----SIPRFQDWNSLGAQVLVTGR 115
           ++ V  DL  QRS +  L   I + +   +  +       S  + Q W  L       GR
Sbjct: 292 ADEVMNDLIKQRSLLSRLKTTIPKSAIFSRSWSASTSLTASTTKKQAWKLLN------GR 345

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           + ++          L +      ++G        S  ++    S+   Q  T +    + 
Sbjct: 346 LKQQ---------LLINTMSA--LLGLVGVGHLQSLPQLITKFSEISTQPYTLKGHASDV 394

Query: 176 RILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
             +  S +     SG    ++ V +       +  P     ++   FSP+ + +A    D
Sbjct: 395 NSVAFSPNGEFLASGSDDKTIKVWNLKNKQKIHTLPGHSGWVWAIAFSPDGKTLASTGAD 454

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 + L +    +  + +      + +  FS +GK    S   D+ + +++      
Sbjct: 455 K----TIKLWNLATGKEIRHLKGHSQGVASVAFSPDGKTLA-SGSLDKTIKLWN-PATGK 508

Query: 293 ATERLTNTLFINISASYSPDSS---------------------------------QIVFE 319
               L        + ++SPD                                    + F 
Sbjct: 509 EIRTLQEHSSGVANVAFSPDGKTLASGSWDKTIKLWNLTTSKVIHTLKGHSDLVMSVAFN 568

Query: 320 SDR------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           SD          + + +   +     R  +          + P+   +  +  +     +
Sbjct: 569 SDSQTLASGSKDKTIKLWNLSTGKTIRTLRGHSDKVNSVAYVPRDSTVLASGSNDNTIKL 628

Query: 374 GVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                   +    +  +   + +   SP GR+L        +   K++ + 
Sbjct: 629 W--NLTTGEIIRTLKRDSGYIYSIVISPDGRNLA--SGGSAENIIKIWPMS 675



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 81/244 (33%), Gaps = 17/244 (6%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             Y        +    FSPN + +A  + D      + + + +  +    +      + A
Sbjct: 383 QPYTLKGHASDVNSVAFSPNGEFLASGSDDK----TIKVWNLKNKQKIHTLPGHSGWVWA 438

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             FS +GK    S   D+ + ++++         L        S ++SPD   +   S  
Sbjct: 439 IAFSPDGKTLA-STGADKTIKLWNL-ATGKEIRHLKGHSQGVASVAFSPDGKTLASGSL- 495

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              + + +       + R  Q+  +   +  +SP G  +A   +      I +     S+
Sbjct: 496 --DKTIKLWNPATGKEIRTLQEHSSGVANVAFSPDGKTLASGSWDKT---IKLWNLTTSK 550

Query: 383 ERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
               ++  +    +  ++   ++L        D   KL+++       TL       +  
Sbjct: 551 VIHTLKGHSDLVMSVAFNSDSQTLA---SGSKDKTIKLWNLSTGKTIRTLRGHSDKVNSV 607

Query: 441 QWVG 444
            +V 
Sbjct: 608 AYVP 611


>gi|207108378|ref|ZP_03242540.1| translocation protein TolB [Helicobacter pylori HPKX_438_CA4C1]
          Length = 150

 Score = 80.8 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVW 354
           ++T    I++S  +  D   + F SDR G   +Y+ +       +++  +  ++     +
Sbjct: 1   KITRYPGIDVSGVFLEDDKSMAFVSDRSGYPNIYMKKLGLKESAEQLLYEGRSNESIDAY 60

Query: 355 SPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
               D I +             F + ++  +    R L  + + Q P +S  GR++++ +
Sbjct: 61  ---KDSIVYVSRENLNEFGKTVFNLNLITLNSKYIRRLTVNGSNQMPRFSTDGRNIMYIK 117

Query: 409 KKDGDTGSKLYSIDLN 424
           K   +    L  +D N
Sbjct: 118 KTPQEYAMGLILLDYN 133


>gi|15805202|ref|NP_293889.1| acyl-peptide hydrolase [Deinococcus radiodurans R1]
 gi|6457834|gb|AAF09754.1|AE001879_2 acyl-peptide hydrolase, putative [Deinococcus radiodurans R1]
          Length = 655

 Score = 80.8 bits (198), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 54/155 (34%), Gaps = 23/155 (14%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQ--------------SNATERLTN--TLFINIS 306
           P+ S +GK+    + +    D    D                  A   LT+  T   + +
Sbjct: 23  PQVSPDGKQVAFVLAQISEEDPAKPDKDFARPRYRSGLWLSEGGAARPLTHAETGRGDSA 82

Query: 307 ASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             +SPD   + F       K  L ++   G + +R++  K      P WSP G  IAFT 
Sbjct: 83  PRWSPDGQNLAFVRSAGEVKAALMLLPLKGGEARRVTHFKNG-VSGPQWSPDGRFIAFTT 141

Query: 366 FSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
            +  +      + +  + R+L           W P
Sbjct: 142 TADTEDK----RDERGEARVLTRPVYRANGADWLP 172



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 66/212 (31%), Gaps = 32/212 (15%)

Query: 216 EPRFSPNQQKVAYA--------------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           +P+ SP+ ++VA+                +          +       P           
Sbjct: 22  DPQVSPDGKQVAFVLAQISEEDPAKPDKDFARPRYRSGLWLSEGGAARPLTHAETGRGDS 81

Query: 262 APRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           APR+S +G+         E    +  + L+     R+T+         +SPD   I F +
Sbjct: 82  APRWSPDGQNLAFVRSAGEVKAALMLLPLKGGEARRVTHFKNGVSGPQWSPDGRFIAFTT 141

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             + +++      +   + R+            W P+              A+ +   + 
Sbjct: 142 TADTEDK-----RDERGEARVLTRPVYRANGADWLPE-----------RPAALWLYDVEA 185

Query: 381 SQERLLVEDS-NLQAPTWSPSGRSLIFSRKKD 411
            + R        + A +W P  R ++  + +D
Sbjct: 186 DKLREWYAPEIGIGALSWWPDSRGVLIVQSED 217



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 98/312 (31%), Gaps = 68/312 (21%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQI-LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
             +    +   +G   R LT +        PR+SP+ Q +A+      ++    ++    
Sbjct: 53  RPRYRSGLWLSEGGAARPLTHAETGRGDSAPRWSPDGQNLAFVR-SAGEVKAALMLLPLK 111

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-------------IYSVDLQSNA 293
               +R+ +F++ +  P++S +G+    +   D                 +Y  +     
Sbjct: 112 GGEARRVTHFKNGVSGPQWSPDGRFIAFTTTADTEDKRDERGEARVLTRPVYRANGADWL 171

Query: 294 TERLTNTLFINISA----------------SYSPDSSQI-VFESDREGKEQLYVMQ---- 332
            ER       ++ A                S+ PDS  + + +S+ E +   +       
Sbjct: 172 PERPAALWLYDVEADKLREWYAPEIGIGALSWWPDSRGVLIVQSEDEWQASQWRQDVYDL 231

Query: 333 ----SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---SGEKFAIGVMKKDGSQERL 385
               ++     +   D  ++       P G   A        G      +   +  Q R 
Sbjct: 232 PLPTADAPAAPQKLLDWNSAAHGLAPHPDGQRFALIGRPAGKGNTEHAHLYLIENGQHRR 291

Query: 386 LVEDSNL----------------QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           L    +                 + P W   G +L+FS    G  G  L++  + G  + 
Sbjct: 292 LDTGHDHPVGDAVGGDCHVGAFPEGPRWL-DGDTLLFSSTVRGSVG--LFTAHIGGGVK- 347

Query: 430 LINTPAYASDPQ 441
                AY  DPQ
Sbjct: 348 -----AYDHDPQ 354



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 41/113 (36%), Gaps = 19/113 (16%)

Query: 350 FDPVWSPQGDLIAFT--------------KFSGEKFAIGVMKKDGSQERLLVE---DSNL 392
            DP  SP G  +AF                F+  ++  G+   +G   R L         
Sbjct: 21  SDPQVSPDGKQVAFVLAQISEEDPAKPDKDFARPRYRSGLWLSEGGAARPLTHAETGRGD 80

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
            AP WSP G++L F R   G+  + L  + L G     +       S PQW  
Sbjct: 81  SAPRWSPDGQNLAFVRS-AGEVKAALMLLPLKGGEARRVTHFKNGVSGPQWSP 132


>gi|73667676|ref|YP_303691.1| hypothetical protein Mbar_A0125 [Methanosarcina barkeri str.
           Fusaro]
 gi|72394838|gb|AAZ69111.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 379

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 111/304 (36%), Gaps = 47/304 (15%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ---- 223
            E   F+ +I++      SG       +   D    +    +     ++P    ++    
Sbjct: 54  NEPKIFDDKIVWGERYSNSGNN-----IYMYDFYTSKETQITTSGSAYDPDIYGDRIVYI 108

Query: 224 ---QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQK 278
                +AY+T +D  +  +Y+ D    +  +   + ++ I     + +  G + +     
Sbjct: 109 DNRNALAYSTKEDIYLHDIYMYDLSTKKETQITTSGKAWI-----NPDIYGDKIVWQEIH 163

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----QLYVMQSN 334
           ++ +DIY  +L +    ++TN+    IS +     ++IV+   R+G +     +Y+   +
Sbjct: 164 NQKVDIYMYNLSTKKEIQITNSGSA-ISPAIY--GNRIVYTDKRDGNDDWLHGIYIYNLS 220

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---------EKFAIGVMKKDGSQERL 385
            + + +IS +  A       S   D I +   +          E   I +      +E  
Sbjct: 221 TNKKMKISNNGPAD----HPSIYKDRIVWENTTFYSNGYGNEVEDHNIYMYDLSTKKETQ 276

Query: 386 LVEDSNLQAPTWSPS--GRSLIFSRKKDGD---TGSKLYSIDLNGRNETLINTPAYASDP 440
           +    + Q    SP   G  +++      D   T   +Y  D++   +T I+       P
Sbjct: 277 ITSSLDDQT---SPDIYGDKIVWEEDGGKDAVYTNHGIYMYDISTNKKTRISASGSVYQP 333

Query: 441 QWVG 444
            ++ 
Sbjct: 334 IYIY 337



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 68/226 (30%), Gaps = 56/226 (24%)

Query: 218 RFSPN--QQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP     ++ Y    D +   +  +Y+ +   ++  K   N  +    P    +  R 
Sbjct: 188 AISPAIYGNRIVYTDKRDGNDDWLHGIYIYNLSTNKKMKISNNGPAD--HPSIYKD--RI 243

Query: 273 L-----ISVQKDEA----MDIYSVDLQSNATERLTNTLFINISA-------SYSPDSSQ- 315
           +                  +IY  DL +    ++T++L    S         +  D  + 
Sbjct: 244 VWENTTFYSNGYGNEVEDHNIYMYDLSTKKETQITSSLDDQTSPDIYGDKIVWEEDGGKD 303

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            V+         +Y+   + + + RIS     S + P                    I +
Sbjct: 304 AVYT-----NHGIYMYDISTNKKTRIS--ASGSVYQP--------------------IYI 336

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                +++  +    +     +   G  +++  + D      + +I
Sbjct: 337 YDISTNKKMRISASGSTYPAIF---GNKIVWEYEVDNKYYVYMVAI 379


>gi|46130696|ref|XP_389128.1| hypothetical protein FG08952.1 [Gibberella zeae PH-1]
          Length = 1113

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 89/223 (39%), Gaps = 15/223 (6%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S+ V SG   +++ + + +      +       +    FS + +KVA +++D      + 
Sbjct: 803  SKKVASGSDDDTIWIWNAETGECEQVLEGHSDDIRSVVFSHDSKKVASSSWDK----TIR 858

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + +       + +     ++ +  FS + K+   S   D+ + I+  + ++   ER    
Sbjct: 859  IWNAETGECEQVLEGHSHIVNSVVFSHDSKKVA-SGSSDKTIRIW--NAETGECERELKG 915

Query: 301  LFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               ++ S  +S DS ++   SD    + + +  +   + +R+ +         V+S    
Sbjct: 916  HSDDVRSVVFSHDSKKVASGSD---DKTIRIWNAETGECERVLEGHSNWVNPVVFSHDSK 972

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSG 401
             +A   +      I +   +  + E ++  D ++ A +++  G
Sbjct: 973  KVASGSWDNT---IRIWDAETGECEEIVPLDGSIYALSFATDG 1012


>gi|289165013|ref|YP_003455151.1| acylaminoacyl-peptidase protein [Legionella longbeachae NSW150]
 gi|288858186|emb|CBJ12054.1| putative acylaminoacyl-peptidase protein [Legionella longbeachae
           NSW150]
          Length = 239

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 74/223 (33%), Gaps = 24/223 (10%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALI 274
            P  SP+ + +AY T D +   R   +         ++ +  S     P +S + K+ + 
Sbjct: 1   MPEISPDGKYIAYNTADHQSTNRYLAIVELKSGKVAQLQHIPSKNNFNPVWSPDSKKLIF 60

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +   +    +  ++  S+    L N      +  ++ D +   F  D    E +Y M   
Sbjct: 61  NTFINNNWYLALINKDSSG-YLLLNNTQNKYTPVWAQDGNSF-FTHD---LETIYWMNLE 115

Query: 335 GSDQK------RISQDKEASYFDPVWSPQGDLIAF----------TKFSGEKFAIGVMKK 378
           G   K       I     +S      SP G  +              + G   A+  +  
Sbjct: 116 GKLLKKWPLDTLIPHGSMSSASRIQVSPDGKTLLMDVDMDEEVHERNWEGPPPALWTLDL 175

Query: 379 -DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G   R+  + +   +P W  + +  IF ++        LY 
Sbjct: 176 ESGKTTRITPKGTLAWSPFWI-NSQQFIFLKQGKNKQTLALYR 217



 Score = 73.1 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 8/122 (6%)

Query: 307 ASYSPDSSQIVF-ESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              SPD   I +  +D +   + L +++       ++      + F+PVWSP    + F 
Sbjct: 2   PEISPDGKYIAYNTADHQSTNRYLAIVELKSGKVAQLQHIPSKNNFNPVWSPDSKKLIFN 61

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            F    + + ++ KD S   LL    N   P W+  G S  F+   +      +Y ++L 
Sbjct: 62  TFINNNWYLALINKDSSGYLLLNNTQNKYTPVWAQDGNSF-FTHDLE-----TIYWMNLE 115

Query: 425 GR 426
           G+
Sbjct: 116 GK 117



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 76/231 (32%), Gaps = 32/231 (13%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L +++     +  L     +  F P +SP+ +K+ + T+ + +    YL     D
Sbjct: 20  STNRYLAIVELKSGKVAQLQHIPSKNNFNPVWSPDSKKLIFNTFINNNW---YLALINKD 76

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--- 304
            +   + N       P ++ +G     S    +   IY ++L+    ++      I    
Sbjct: 77  SSGYLLLNNTQNKYTPVWAQDGN----SFFTHDLETIYWMNLEGKLLKKWPLDTLIPHGS 132

Query: 305 -ISAS---YSPDSSQIVFESDRE----------GKEQLYVMQSNGSDQKRISQDKEASYF 350
             SAS    SPD   ++ + D +              L+ +        RI+        
Sbjct: 133 MSSASRIQVSPDGKTLLMDVDMDEEVHERNWEGPPPALWTLDLESGKTTRITPKG----- 187

Query: 351 DPVWSP---QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
              WSP         F K    K  + + +            +++Q P+ S
Sbjct: 188 TLAWSPFWINSQQFIFLKQGKNKQTLALYRGSLKNLVETFLLNDVQTPSIS 238


>gi|170115928|ref|XP_001889157.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635947|gb|EDR00248.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1181

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 56/311 (18%), Positives = 104/311 (33%), Gaps = 45/311 (14%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             R+WD    + ++               H   D+++       G            ++SG
Sbjct: 822  IRVWDSLTGQSVMN----------PLKGHK--DEVHSVAFSPDG----------RYIISG 859

Query: 188  IIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                ++ V D   G ++       +  +    FS + + +   + D    LRV+   T  
Sbjct: 860  SADKTIRVWDAHTGQSVMDPLRGHEAEVHSVVFSSDGRYIVSGSAD--KTLRVWDAQTGQ 917

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI- 305
                  +      + +  FSS+G+  + S   D  + ++         + + +     + 
Sbjct: 918  SVM-DPLEGHDRKVYSIAFSSDGRHIV-SGSGDGTVRVW----DFQGCQSVMDPCDDEVY 971

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S ++SPD   +V  S  +G   +      G    R S+          +SP G  +    
Sbjct: 972  SVAFSPDGRHVV--SGCDGHSVMVWDTWTGQCVMRDSRGHPCPVNAVAFSPDGKHVVSVA 1029

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID- 422
             S     I V      Q  L  +D    + +  +SP GR +        D   KL+    
Sbjct: 1030 DS-----IRVWDTQTGQCMLSPDDGTGSIHSVAYSPCGRHIALGLY---DGTVKLWDAQV 1081

Query: 423  LNGRNETLINT 433
            L G N+T I T
Sbjct: 1082 LTGPNKTDIAT 1092



 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/317 (15%), Positives = 97/317 (30%), Gaps = 50/317 (15%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      R  +        R+WD    + ++           R   H    +++  +  
Sbjct: 846  SVAFSPDGRYIISGSADKTIRVWDAHTGQSVM--------DPLR--GHEA--EVHSVVFS 893

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G            +VSG    +L V D + G ++       D+ ++   FS + + + 
Sbjct: 894  SDG----------RYIVSGSADKTLRVWDAQTGQSVMDPLEGHDRKVYSIAFSSDGRHIV 943

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D    +RV+            +      + +  FS +G+  +      +   +   
Sbjct: 944  SGSGD--GTVRVWDFQ----GCQSVMDPCDDEVYSVAFSPDGRHVV---SGCDGHSVMVW 994

Query: 288  DLQSNA-TERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            D  +     R +      ++A ++SPD   +V  +D      + V  +          D 
Sbjct: 995  DTWTGQCVMRDSRGHPCPVNAVAFSPDGKHVVSVADS-----IRVWDTQTGQCMLSPDDG 1049

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRS 403
              S     +SP G  IA   + G           G  +  +            +SP G  
Sbjct: 1050 TGSIHSVAYSPCGRHIALGLYDGTVKLWDAQVLTGPNKTDIATHYKKWIKQVAFSPDGMH 1109

Query: 404  LIFSRKKDGDTGSKLYS 420
            +        DT  K++ 
Sbjct: 1110 IASVSD---DTTVKIWD 1123



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 83/227 (36%), Gaps = 20/227 (8%)

Query: 185  VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VSG    ++ V D   G ++          +    FSP+ + +   + D    +RV+   
Sbjct: 814  VSGSDDKTIRVWDSLTGQSVMNPLKGHKDEVHSVAFSPDGRYIISGSAD--KTIRVWDAH 871

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTL 301
            T        +    + + +  FSS+G+  + S   D+ + ++  D Q+  +    L    
Sbjct: 872  TGQSVM-DPLRGHEAEVHSVVFSSDGRYIV-SGSADKTLRVW--DAQTGQSVMDPLEGHD 927

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S ++S D   IV  S   G   + V    G   + +    +   +   +SP G  +
Sbjct: 928  RKVYSIAFSSDGRHIVSGS---GDGTVRVWDFQG--CQSVMDPCDDEVYSVAFSPDGRHV 982

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLI 405
                   +  ++ V      Q  +     +   + A  +SP G+ ++
Sbjct: 983  V---SGCDGHSVMVWDTWTGQCVMRDSRGHPCPVNAVAFSPDGKHVV 1026



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 67/205 (32%), Gaps = 11/205 (5%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               +       +    FSP+   +   + D    +RV+   T         G  +  + 
Sbjct: 789 RCFLILEGHSDSVKSVAFSPDGMHIVSGSDD--KTIRVWDSLTGQSVMNPLKG-HKDEVH 845

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +  FS +G+   IS   D+ + ++      +  + L        S  +S D   IV  S 
Sbjct: 846 SVAFSPDGRYI-ISGSADKTIRVWDAHTGQSVMDPLRGHEAEVHSVVFSSDGRYIVSGS- 903

Query: 322 REGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
               + L V  +          +  +   +   +S  G  I      G    + V    G
Sbjct: 904 --ADKTLRVWDAQTGQSVMDPLEGHDRKVYSIAFSSDGRHIVSGSGDGT---VRVWDFQG 958

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI 405
            Q  +   D  + +  +SP GR ++
Sbjct: 959 CQSVMDPCDDEVYSVAFSPDGRHVV 983



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 70/211 (33%), Gaps = 21/211 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTR-----IDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           F+P   K+  + +  +   +  ++ T       DR    +      + +  FS +G   +
Sbjct: 757 FAPKDSKI--SMHFLKHFEKTLIVQTGQMENWSDRCFLILEGHSDSVKSVAFSPDGMHIV 814

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            S   D+ + ++      +    L        S ++SPD   I+  S     + + V  +
Sbjct: 815 -SGSDDKTIRVWDSLTGQSVMNPLKGHKDEVHSVAFSPDGRYIISGS---ADKTIRVWDA 870

Query: 334 NGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVED 389
           +         +  EA     V+S  G  I           + V      Q     L   D
Sbjct: 871 HTGQSVMDPLRGHEAEVHSVVFSSDGRYIVSGSADKT---LRVWDAQTGQSVMDPLEGHD 927

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             + +  +S  GR ++      GD   +++ 
Sbjct: 928 RKVYSIAFSSDGRHIV---SGSGDGTVRVWD 955


>gi|282879437|ref|ZP_06288175.1| peptidase, S9A/B/C familie, catalytic domain protein [Prevotella
           buccalis ATCC 35310]
 gi|281298435|gb|EFA90866.1| peptidase, S9A/B/C familie, catalytic domain protein [Prevotella
           buccalis ATCC 35310]
          Length = 722

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 78/242 (32%), Gaps = 63/242 (26%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S +GK+ +  V      Q      ++ +D       +LT         ++  
Sbjct: 49  GRIGGATASPDGKQVVYQVGYYSVKQNKSQQMLFVMDADGKNKRQLTTGQQSETDGAWIE 108

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--------- 362
              +I F +      QL+ M ++GSD+K+++ +         +SP    +          
Sbjct: 109 QGRRIAFIT----GGQLWSMNADGSDRKQLT-NSSVDIEGFKFSPDERKVILIKSLPYHG 163

Query: 363 ------------------------FTKFSGEKFAIGVMKKDGSQERL---LVEDSNLQAP 395
                                   +  +        V   DGS       +++    + P
Sbjct: 164 TIQANPADLPLATGRLATDMNYRHWDHYVETIAHPFVADYDGSSINEGVDVLQGEPFECP 223

Query: 396 T----------WSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTPAYASD 439
           T          WSP  +S+ ++ RKK+G      T + +Y  D+  R    +  P+   +
Sbjct: 224 TAPFGGTEQLAWSPDSKSIAYTCRKKEGVQYAISTDTDIYLYDVATRKTKNLCKPSGYKE 283

Query: 440 PQ 441
           P 
Sbjct: 284 PA 285



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/282 (10%), Positives = 70/282 (24%), Gaps = 88/282 (31%)

Query: 220 SPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ ++V Y     +       ++  +     +  +++   +       +   G+R    
Sbjct: 57  SPDGKQVVYQVGYYSVKQNKSQQMLFVMDADGKNKRQLTTGQQSETDGAWIEQGRRIAFI 116

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------------------ 317
                   ++S++   +  ++LTN+        +SPD  +++                  
Sbjct: 117 T----GGQLWSMNADGSDRKQLTNSSVDIEGFKFSPDERKVILIKSLPYHGTIQANPADL 172

Query: 318 --------------------------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                                     F +D +G      +     +              
Sbjct: 173 PLATGRLATDMNYRHWDHYVETIAHPFVADYDGSSINEGVDVLQGEPFECPTAPFGGTEQ 232

Query: 352 PVWSPQGDLIAFTKFSGEKFA--------IGVMKKDGSQERLLVEDSNLQAPT------- 396
             WSP    IA+T    E           I +      + + L + S  + P        
Sbjct: 233 LAWSPDSKSIAYTCRKKEGVQYAISTDTDIYLYDVATRKTKNLCKPSGYKEPAIDATKSM 292

Query: 397 ---------------------WSPSGRSLIFSRKKDGDTGSK 417
                                +S  G+ + +         S 
Sbjct: 293 KNQAVNHQPGDMNVGYDTNPQFSSDGKYIAWQSMAHNGYESD 334



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 42/313 (13%), Positives = 87/313 (27%), Gaps = 87/313 (27%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           + +T  +              ++ I    L  M+ DG++ + LT S   I    +FSP++
Sbjct: 92  RQLTTGQQSETDGAWIEQGRRIAFITGGQLWSMNADGSDRKQLTNSSVDIEGF-KFSPDE 150

Query: 224 QKVAYATYDDEDI---------------------LRVYLMDTRIDRAPKRIGNFRSMIL- 261
           +KV                                R +         P  + ++    + 
Sbjct: 151 RKVILIKSLPYHGTIQANPADLPLATGRLATDMNYRHWDHYVETIAHP-FVADYDGSSIN 209

Query: 262 ---------------AP-------RFSSNGKRALISVQKDEA--------MDIYSVDLQS 291
                          AP        +S + K    + +K E          DIY  D+ +
Sbjct: 210 EGVDVLQGEPFECPTAPFGGTEQLAWSPDSKSIAYTCRKKEGVQYAISTDTDIYLYDVAT 269

Query: 292 NATERL-------------TNTL--------------FINISASYSPDSSQIVFES---- 320
             T+ L             T ++                + +  +S D   I ++S    
Sbjct: 270 RKTKNLCKPSGYKEPAIDATKSMKNQAVNHQPGDMNVGYDTNPQFSSDGKYIAWQSMAHN 329

Query: 321 -DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                + +L V       +  +++  +++     W    +   F      K  +      
Sbjct: 330 GYESDRNRLCVYTLANGTKNYVTEQFDSNVDAYCWGNDNNTFYFIGVWHGKTHVYQTNLK 389

Query: 380 GSQERLLVEDSNL 392
           G Q + L +    
Sbjct: 390 G-QIKQLTDGQYD 401



 Score = 43.1 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 398 SPSGRSLIF----SRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQWV 443
           SP G+ +++       K   +   L+ +D +G+N+  + T   + +D  W+
Sbjct: 57  SPDGKQVVYQVGYYSVKQNKSQQMLFVMDADGKNKRQLTTGQQSETDGAWI 107


>gi|326435541|gb|EGD81111.1| WD-40 repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 1661

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 97/320 (30%), Gaps = 63/320 (19%)

Query: 108  AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            A  + +     +G       +    R+WD   R+ +                H  ++D+Y
Sbjct: 1324 ADNVTSVTFSPDGKRIVSGSIDSTVRIWDAGVRQTLA-------------QCHGHTNDVY 1370

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                              + +VSG    ++ V D +              +    FSP  
Sbjct: 1371 SVAFSPDD----------KRIVSGSHDKTVRVWDAETGQELAQCNGHTNSVTSVSFSPTG 1420

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK---------RALI 274
             ++   + D      V + +T       R       + +   S +GK          AL 
Sbjct: 1421 TRIVSGSKDK----TVRIWNTDTGEELARYSGHTGKVRSVALSRDGKLIVSGSGTPSALF 1476

Query: 275  SVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +  +D ++ I+  D+ +   ++LT       +  S ++ PD   IV  S       + + 
Sbjct: 1477 TRGEDYSVRIW--DVTTG--QQLTKCDGHTDVVTSVAFGPDGQHIVSGSR---DNTVCIW 1529

Query: 332  QSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
                   +++++    +       + P G  I           + +        + L   
Sbjct: 1530 DVTTG--QQLTKCDGHTDVVTSVAFGPDGRRIVSGSRDNT---VCIWDVTTG--QQLTKC 1582

Query: 388  --EDSNLQAPTWSPSGRSLI 405
                  + +  + P GR ++
Sbjct: 1583 DGHTDVVTSVAFGPDGRRIV 1602



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 102/308 (33%), Gaps = 39/308 (12%)

Query: 153  KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
               H ++     + +     F+     ++    SG    ++ + D    N+         
Sbjct: 1228 HTGHKLAQWNGHTASISSVAFSDDGKLIA----SGSQDMTVRIWDAGTGNLLAQCDGHLG 1283

Query: 213  ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             +    FS +  ++A  + D      V + + +  +           + +  FS +GKR 
Sbjct: 1284 DVNSVTFSADGTRIASGSDDK----TVRIWNAKTGQEMATYIGHADNVTSVTFSPDGKRI 1339

Query: 273  LISVQKDEAMDIYSVDLQSNATERLT--NTLFINI-SASYSPDSSQIVFESDREGKEQLY 329
            + S   D  + I+     +   + L   +    ++ S ++SPD  +IV  S     + + 
Sbjct: 1340 V-SGSIDSTVRIW----DAGVRQTLAQCHGHTNDVYSVAFSPDDKRIVSGSH---DKTVR 1391

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLV 387
            V  +    +         S     +SP G  I           + +   D  +E  R   
Sbjct: 1392 VWDAETGQELAQCNGHTNSVTSVSFSPTGTRIVSGSKDKT---VRIWNTDTGEELARYSG 1448

Query: 388  EDSNLQAPTWSPSGRSLIFSR-------KKDGDTGSKLYSIDLNGRNET-------LINT 433
                +++   S  G+ ++           +  D   +++ +   G+  T       ++ +
Sbjct: 1449 HTGKVRSVALSRDGKLIVSGSGTPSALFTRGEDYSVRIWDV-TTGQQLTKCDGHTDVVTS 1507

Query: 434  PAYASDPQ 441
             A+  D Q
Sbjct: 1508 VAFGPDGQ 1515



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 84/246 (34%), Gaps = 21/246 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + +VSG   N++ V D    +           +    FS + + +A  + D      V +
Sbjct: 1211 QRIVSGCADNTVRVWDAHTGHKLAQWNGHTASISSVAFSDDGKLIASGSQDM----TVRI 1266

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTN 299
             D        +       + +  FS++G R   S   D+ + I+  + ++       +  
Sbjct: 1267 WDAGTGNLLAQCDGHLGDVNSVTFSADGTRIA-SGSDDKTVRIW--NAKTGQEMATYI-G 1322

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                  S ++SPD  +IV  S       + +  +                +   +SP   
Sbjct: 1323 HADNVTSVTFSPDGKRIVSGSI---DSTVRIWDAGVRQTLAQCHGHTNDVYSVAFSPDDK 1379

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             I           + V   +  QE  +     +++ + ++SP+G  ++       D   +
Sbjct: 1380 RIVSGSHDKT---VRVWDAETGQELAQCNGHTNSVTSVSFSPTGTRIV---SGSKDKTVR 1433

Query: 418  LYSIDL 423
            +++ D 
Sbjct: 1434 IWNTDT 1439



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/236 (11%), Positives = 78/236 (33%), Gaps = 26/236 (11%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT------YDDEDI 236
             +VSG    ++ + + D              +     S + + +   +      +   + 
Sbjct: 1422 RIVSGSKDKTVRIWNTDTGEELARYSGHTGKVRSVALSRDGKLIVSGSGTPSALFTRGED 1481

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              V + D    +   +      ++ +  F  +G+  + S  +D  + I+  D+ +   ++
Sbjct: 1482 YSVRIWDVTTGQQLTKCDGHTDVVTSVAFGPDGQHIV-SGSRDNTVCIW--DVTTG--QQ 1536

Query: 297  LTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FD 351
            LT       +  S ++ PD  +IV  S       + +        +++++    +     
Sbjct: 1537 LTKCDGHTDVVTSVAFGPDGRRIVSGSR---DNTVCIWDVTTG--QQLTKCDGHTDVVTS 1591

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
              + P G  I           + V      ++        S +++  +S  G  ++
Sbjct: 1592 VAFGPDGRRIVSGSHDKT---VRVWDSSTGEDLCVYRGHTSTVRSAVFSTLGTFIV 1644



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 67/236 (28%), Gaps = 50/236 (21%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                   +    FS + +++   ++D      V + D    +   R       + +  F+
Sbjct: 1076 LKGHTGYVTSVSFSADGKRLVSGSWDK----TVRVWDASTGQELARCIGHTDWVTSVVFT 1131

Query: 267  SNGKRALISVQKDEAMDIY----------------------SVDLQSNATE--------R 296
             + K   +SV  D+ +  +                      +V                R
Sbjct: 1132 PDNKHI-MSVSDDKTVRTWDSDTTDELILRRMQTEELGQRAAVSANGKYVRTGIWAERFR 1190

Query: 297  LTNTLFIN---ISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFD 351
              N    N    SAS SPD  +IV      G     + V  ++   +        AS   
Sbjct: 1191 AGNHNTPNSSATSASVSPDGQRIV-----SGCADNTVRVWDAHTGHKLAQWNGHTASISS 1245

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
              +S  G LIA          + +            +    ++ + T+S  G  + 
Sbjct: 1246 VAFSDDGKLIASGSQD---MTVRIWDAGTGNLLAQCDGHLGDVNSVTFSADGTRIA 1298



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 71/203 (34%), Gaps = 27/203 (13%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             P R  +   P  +     + +        L         D    ++      + +  FS
Sbjct: 1035 LPLRSSLAASPAIA-----LLWTVSSQPQPLMTIPPILTQDPCLMQLKGHTGYVTSVSFS 1089

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGK 325
            ++GKR + S   D+ + ++  D  +     R         S  ++PD+  I+  SD    
Sbjct: 1090 ADGKRLV-SGSWDKTVRVW--DASTGQELARCIGHTDWVTSVVFTPDNKHIMSVSD---D 1143

Query: 326  EQLYVMQSNGSDQ---KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            + +    S+ +D+   +R+  ++         S  G  +  T    E+F  G        
Sbjct: 1144 KTVRTWDSDTTDELILRRMQTEELGQRA--AVSANGKYV-RTGIWAERFRAGNHN----- 1195

Query: 383  ERLLVEDSNLQAPTWSPSGRSLI 405
                  +S+  + + SP G+ ++
Sbjct: 1196 ----TPNSSATSASVSPDGQRIV 1214



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 72/199 (36%), Gaps = 30/199 (15%)

Query: 110  VLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIG----KKFFSSPASWRKIAHTIS-- 159
            ++V+G           +   V  R+WDV   +Q+          +S A      H +S  
Sbjct: 1464 LIVSGSGTPSALFTRGEDYSV--RIWDVTTGQQLTKCDGHTDVVTSVAFGPDGQHIVSGS 1521

Query: 160  -DDIY--------QSITGEKG--DFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYL 206
             D+          Q +T   G  D  + + F      +VSG   N++C+ D         
Sbjct: 1522 RDNTVCIWDVTTGQQLTKCDGHTDVVTSVAFGPDGRRIVSGSRDNTVCIWDVTTGQQLTK 1581

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  ++    F P+ +++   ++D    +RV+   T  D    R     S + +  FS
Sbjct: 1582 CDGHTDVVTSVAFGPDGRRIVSGSHD--KTVRVWDSSTGEDLCVYR--GHTSTVRSAVFS 1637

Query: 267  SNGKRALISVQKDEAMDIY 285
            + G   + S   D  + I+
Sbjct: 1638 TLGTFIV-SGGYDNTVRIW 1655


>gi|220909615|ref|YP_002484926.1| WD-40 repeat-containing protein [Cyanothece sp. PCC 7425]
 gi|219866226|gb|ACL46565.1| WD-40 repeat protein [Cyanothece sp. PCC 7425]
          Length = 1209

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 71/190 (37%), Gaps = 12/190 (6%)

Query: 218  RFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             FSP+ ++V    +     + R   +        + +   ++ + A  F+  G     S 
Sbjct: 979  AFSPDGRQVISGGSNGTVKLWRRDKLGRFPRHPDQSLVGHQTAVYAVSFNPQGNLIA-SG 1037

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              D+ + ++  +      + LT       S S+SPD   +   S     +    +   G 
Sbjct: 1038 SADQTIKLWRPN--GQLFQTLTGHRGAINSVSFSPDGKTLASAS----SDNTVKLWQPGK 1091

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAP 395
            D  +  +  +A   D  +SP G L+A     G    + V    GS  R L   +  +Q  
Sbjct: 1092 DAVKTLEGHDAGVADVKFSPDGRLLASASVDG---KVKVWTLAGSLLRTLTGHEGLVQTV 1148

Query: 396  TWSPSGRSLI 405
             +SP+GR + 
Sbjct: 1149 AFSPNGRLIA 1158



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 89/262 (33%), Gaps = 51/262 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALI 274
             SP+ Q +  A  D                  +R+   R     + A  FS +G+    
Sbjct: 574 AVSPDGQLLGVAALDG--------TVQLWRPNGQRVATLRGHQAAVHAVDFSPDGRLLA- 624

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +   D+ + ++ VD      + LT       +  +SPD  ++    D + K  L+     
Sbjct: 625 TGSTDQTVKLWRVD--GTLLKTLTRHQARVHTVKFSPDGQRLA-SIDSDQKAYLWNTTQP 681

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFT-----KFSGEKFAIGVMKKDGS-------- 381
            S   R+ Q    +     +SP    I  +     +F      I + +   +        
Sbjct: 682 ASQLGRLIQPLP-NCNYLAFSPDRRWIVASFGPARRFRDPPREIQLKRPKDNNTETTEPP 740

Query: 382 ---QERLLVEDS-------NLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GR 426
                RLL  +          + P    ++SP  R +  +   DG     L+ +D + G+
Sbjct: 741 LPANVRLLTAEGRLVREFATERGPIFALSFSPDSRLIA-TASVDGPV--NLWQLDGSLGK 797

Query: 427 N----ETLINTPAYASDPQWVG 444
                 + + T A++ D QW+ 
Sbjct: 798 TFIGHRSNVRTIAFSPDGQWLA 819



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 116/315 (36%), Gaps = 41/315 (13%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +D+I   +    G ++  +    + +    +  ++ +   +G  +  L       +    
Sbjct: 558 ADEIN-RLDIGAGAWDVAVSPDGQLLGVAALDGTVQLWRPNGQRVATL-RGHQAAVHAVD 615

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A  + D    ++++ +D       K +   ++ +   +FS +G+R   S+  
Sbjct: 616 FSPDGRLLATGSTD--QTVKLWRVD---GTLLKTLTRHQARVHTVKFSPDGQRLA-SIDS 669

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-----SDREGKEQLYVMQS 333
           D+   +++    ++   RL   L      ++SPD   IV         R+   ++ + + 
Sbjct: 670 DQKAYLWNTTQPASQLGRLIQPLPNCNYLAFSPDRRWIVASFGPARRFRDPPREIQLKRP 729

Query: 334 NGS-----------DQKRISQDK---------EASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +           + + ++ +              F   +SP   LIA     G    +
Sbjct: 730 KDNNTETTEPPLPANVRLLTAEGRLVREFATERGPIFALSFSPDSRLIATASVDG---PV 786

Query: 374 GVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL---YSIDLNGRNET 429
            + + DGS  +  +   SN++   +SP G+ L  +         +    +     G   T
Sbjct: 787 NLWQLDGSLGKTFIGHRSNVRTIAFSPDGQWLATAGTDQDIRLWQTEGGWLKTFAGHQAT 846

Query: 430 LINTPAYASDPQWVG 444
           + N   ++   QW+ 
Sbjct: 847 VWNV-VFSPAGQWLA 860



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 53/297 (17%), Positives = 101/297 (34%), Gaps = 32/297 (10%)

Query: 71   KDLQRSDVFNLISQDSFKQKIT--NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
             +L  +  FN +   S  +++     DS   FQ   ++  Q +VT  +   G        
Sbjct: 889  NNLLFTPEFNQLLSLSVDRRLNIWQEDSGDNFQ---AVPVQSIVTSPLSVRG-------- 937

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
                + ++  +I   + S     R+   ++   +  +       F+     V     +G 
Sbjct: 938  --LALSNQGDVIAIAYQSGQIELRRRNGSLVQTLEANGGIRGVAFSPDGRQVISGGSNGT 995

Query: 189  IKNSLCVMDRDGANIRYLTPS---RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +K  L   D+ G   R+   S       ++   F+P    +A  + D      + L    
Sbjct: 996  VK--LWRRDKLGRFPRHPDQSLVGHQTAVYAVSFNPQGNLIASGSADQ----TIKLWRPN 1049

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +  + +   R  I +  FS +GK    S   D  + ++       A + L        
Sbjct: 1050 -GQLFQTLTGHRGAINSVSFSPDGKTLA-SASSDNTVKLWQPGKD--AVKTLEGHDAGVA 1105

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               +SPD   +   S  +GK +++ +        R     E       +SP G LIA
Sbjct: 1106 DVKFSPDGRLLASAS-VDGKVKVWTLA---GSLLRTLTGHEGLVQTVAFSPNGRLIA 1158



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 54/276 (19%), Positives = 96/276 (34%), Gaps = 29/276 (10%)

Query: 162  IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            + +  T     F       S  + +  +   + +   DG+  +     R  +     FSP
Sbjct: 755  VREFATERGPIFALSFSPDSRLIATASVDGPVNLWQLDGSLGKTFIGHRSNV-RTIAFSP 813

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + Q +A A  D      + L  T      K     ++ +    FS  G+    S  +D  
Sbjct: 814  DGQWLATAGTDQ----DIRLWQTE-GGWLKTFAGHQATVWNVVFSPAGQWLA-SASEDGT 867

Query: 282  MDIY--------SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            + ++         +   ++    L  T   N   S S D    +++ D     Q   +QS
Sbjct: 868  VRLWKPRQPLWDVLAGHTDTVNNLLFTPEFNQLLSLSVDRRLNIWQEDSGDNFQAVPVQS 927

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
              +           S      S QGD+IA    SG    I + +++GS  + L  +  ++
Sbjct: 928  IVTSPL--------SVRGLALSNQGDVIAIAYQSG---QIELRRRNGSLVQTLEANGGIR 976

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
               +SP GR +I       +   KL+  D  GR   
Sbjct: 977  GVAFSPDGRQVI---SGGSNGTVKLWRRDKLGRFPR 1009



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 77/246 (31%), Gaps = 15/246 (6%)

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES- 183
           RV+  L     R Q        SP   R  +       Y   T +      R++    + 
Sbjct: 636 RVDGTLLKTLTRHQARVHTVKFSPDGQRLASIDSDQKAYLWNTTQPASQLGRLIQPLPNC 695

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                  +   ++   G   R+  P R+  L  P+   +          +  +     + 
Sbjct: 696 NYLAFSPDRRWIVASFGPARRFRDPPREIQLKRPK---DNN----TETTEPPLPANVRLL 748

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T   R  +     R  I A  FS + +    +   D  ++++ +D     T         
Sbjct: 749 TAEGRLVREFATERGPIFALSFSPDSRLIA-TASVDGPVNLWQLDGSLGKT--FIGHRSN 805

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + ++SPD   +       G +Q   +        +     +A+ ++ V+SP G  +A 
Sbjct: 806 VRTIAFSPDGQWLA----TAGTDQDIRLWQTEGGWLKTFAGHQATVWNVVFSPAGQWLAS 861

Query: 364 TKFSGE 369
               G 
Sbjct: 862 ASEDGT 867



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 72/198 (36%), Gaps = 13/198 (6%)

Query: 219  FSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P   ++   + D   +I +    D       + I      +     S+ G    I+ Q
Sbjct: 893  FTPEFNQLLSLSVDRRLNIWQEDSGDNFQAVPVQSIVTSPLSVRGLALSNQGDVIAIAYQ 952

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               +  I       +  + L     I    ++SPD  Q++      G  +L+     G  
Sbjct: 953  ---SGQIELRRRNGSLVQTLEANGGI-RGVAFSPDGRQVI-SGGSNGTVKLWRRDKLGRF 1007

Query: 338  QKRISQ---DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQ 393
             +   Q     + + +   ++PQG+LIA          I + + +G   + L      + 
Sbjct: 1008 PRHPDQSLVGHQTAVYAVSFNPQGNLIASGSADQT---IKLWRPNGQLFQTLTGHRGAIN 1064

Query: 394  APTWSPSGRSLIFSRKKD 411
            + ++SP G++L  +   +
Sbjct: 1065 SVSFSPDGKTLASASSDN 1082


>gi|312199879|ref|YP_004019940.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EuI1c]
 gi|311231215|gb|ADP84070.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EuI1c]
          Length = 964

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 88/280 (31%), Gaps = 19/280 (6%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVV---SGIIKNSLC-VMDRDGANIRYLTPSRDQ 212
           + +      +TG  G      +     V    S      L  V D + +    +   +D 
Sbjct: 617 SFAAAAATPLTGHTGAVLGAAVSPDGRVAATASADGSIRLWDVRDAESSRPLAVIDQQDG 676

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNG 269
            +    FSP+   +A A Y+        L D      P ++ + R     + +  FS +G
Sbjct: 677 WVTAAAFSPDGNLLATAGYNR----LATLWDVSDPTRPSKVASLRGHDGYVASVAFSPDG 732

Query: 270 KRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                +   D A     VD         LT         ++SPD   +   S  +   +L
Sbjct: 733 NLLATAGYDDTARVWNVVDPTDPVQLAVLTGHTGWVRQVAFSPDGRLLATAST-DHTTRL 791

Query: 329 YVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERL 385
           + +    S     +      Y     +SP G  +A   + G      V       +   +
Sbjct: 792 WDVAVPTSPTLLATLTGHTDYVWALAFSPDGRELATAGYDGTARLWDVTDPAHPRAVATI 851

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             +   + A  +SP GR+L        D    L+ +   G
Sbjct: 852 PADAHWVLAVAFSPDGRTLA---TGGRDGTVHLWDLTAPG 888



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 73/243 (30%), Gaps = 12/243 (4%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +     SP+  +VA     D  I    + D    R    I      + A  
Sbjct: 624 TPLTGHTGAVLGAAVSPDG-RVAATASADGSIRLWDVRDAESSRPLAVIDQQDGWVTAAA 682

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIVFESDR 322
           FS +G     +   +    ++ V   +  ++   L        S ++SPD + +      
Sbjct: 683 FSPDGNLLA-TAGYNRLATLWDVSDPTRPSKVASLRGHDGYVASVAFSPDGNLLATAGYD 741

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDG 380
           +      V+      Q  +            +SP G L+A          + + V     
Sbjct: 742 DTARVWNVVDPTDPVQLAVLTGHTGWVRQVAFSPDGRLLATASTDHTTRLWDVAVPTSPT 801

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
               L      + A  +SP GR L  +     D  ++L+ +        +   PA A   
Sbjct: 802 LLATLTGHTDYVWALAFSPDGRELATAGY---DGTARLWDVTDPAHPRAVATIPADAH-- 856

Query: 441 QWV 443
            WV
Sbjct: 857 -WV 858



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 43/116 (37%), Gaps = 10/116 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS---MILA 262
                   ++   FSP+ +++A A YD        L D      P+ +    +    +LA
Sbjct: 805 TLTGHTDYVWALAFSPDGRELATAGYDG----TARLWDVTDPAHPRAVATIPADAHWVLA 860

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISASYSPDSSQI 316
             FS +G+    +  +D  + ++ +       A   L        S +++PD   +
Sbjct: 861 VAFSPDGRTLA-TGGRDGTVHLWDLTAPGQPAAAGVLAGHSDWIESIAFTPDGRAL 915


>gi|148658115|ref|YP_001278320.1| NB-ARC domain-containing protein [Roseiflexus sp. RS-1]
 gi|148570225|gb|ABQ92370.1| NB-ARC domain protein [Roseiflexus sp. RS-1]
          Length = 1523

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 76/228 (33%), Gaps = 18/228 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++VSG    ++ V + +   +          +     SP+ + +   + D      V +
Sbjct: 1254 RTIVSGSDDRTVKVWEAESGRLLRSLEGHTGSVLAVAVSPDGRTIVSGSDDR----TVKV 1309

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +    R  + +      +LA   S +G+  + S   D  + ++  +        L    
Sbjct: 1310 WEAESGRLLRSLEGHTGSVLAVAVSPDGRTIV-SGSDDRTVKVWEAE-SGRLLRSLEGHT 1367

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                + + SPD   IV  S       + V ++      R  +    S      SP G  I
Sbjct: 1368 DWVRAVAVSPDGRTIVSGS---WDNTVKVWEAESGRLLRSLKGHTGSVRAVAVSPDGRTI 1424

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLI 405
                +      + V + +    RLL         + A   SP GR+++
Sbjct: 1425 VSGSWDNT---VKVWEAESG--RLLRSLEGHTGGVNAVAVSPDGRTIV 1467



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 75/225 (33%), Gaps = 12/225 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++VSG    ++ V + +   +          +     SP+ + +   ++D      V +
Sbjct: 750 RTIVSGSHDRTVKVWEAESGRLLRSLEGHTGSVRAVAVSPDGRTIVSGSHDR----TVKV 805

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +    R  + +      + A   S +G+  + S   D  + ++  +        L    
Sbjct: 806 WEAESGRLLRSLEGHTGSVRAVAVSPDGRTIV-SGSHDRTVKVWEAE-SGRLLRSLEGHT 863

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               + + SPD   IV  S DR     + V  +      R  +    S      SP G  
Sbjct: 864 GSVRAVAVSPDGRTIVSGSHDRT----VKVWDAASGRLLRSLKGHTGSVLAVAVSPDGRT 919

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           I  +        +   +       L     +++A   SP GR+++
Sbjct: 920 IV-SGSHDRTVKVWEAESGRLLRSLEGHTGSVRAVAVSPDGRTIV 963



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 72/226 (31%), Gaps = 14/226 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++VSG    ++ V + +   +          +     SP+ + +   + D      V +
Sbjct: 1002 RTIVSGSDDRTVKVWEAESGRLLRSLEGHTDWVLAVAVSPDGRTIVSGSRDR----TVKV 1057

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +    R  + +      +LA   S +G+  + S   D  + ++  +        L    
Sbjct: 1058 WEAESGRLLRSLEGHTGSVLAVAVSPDGRTIV-SGSHDRTVKVWEAE-SGRLLRSLEGHT 1115

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                + + SPD   IV  S       + V ++      R  +    S      SP G  I
Sbjct: 1116 DWVRAVAVSPDGRTIVSGS---WDNTVKVWEAESGRLLRSLEGHTGSVRAVAVSPDGRTI 1172

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
                       + V      +    +E       A   SP GR+++
Sbjct: 1173 VSGSHDRT---VKVWDAASGRLLRSLEGHTDWVLAVAVSPDGRTIV 1215



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 88/266 (33%), Gaps = 32/266 (12%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++VSG    ++ V + +   +          +     SP+ + +   ++D      V +
Sbjct: 834  RTIVSGSHDRTVKVWEAESGRLLRSLEGHTGSVRAVAVSPDGRTIVSGSHDR----TVKV 889

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D    R  + +      +LA   S +G+  + S   D  + ++  +        L    
Sbjct: 890  WDAASGRLLRSLKGHTGSVLAVAVSPDGRTIV-SGSHDRTVKVWEAE-SGRLLRSLEGHT 947

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                + + SPD   IV  S       + V ++      R  +    S      SP G  I
Sbjct: 948  GSVRAVAVSPDGRTIVSGS---WDNTVKVWEAESGRPLRSLEGHTGSVRAVAVSPDGRTI 1004

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI-------------- 405
                   +   + V + +  +    +E       A   SP GR+++              
Sbjct: 1005 V---SGSDDRTVKVWEAESGRLLRSLEGHTDWVLAVAVSPDGRTIVSGSRDRTVKVWEAE 1061

Query: 406  ---FSRKKDGDTGSKL-YSIDLNGRN 427
                 R  +G TGS L  ++  +GR 
Sbjct: 1062 SGRLLRSLEGHTGSVLAVAVSPDGRT 1087



 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 96/306 (31%), Gaps = 50/306 (16%)

Query: 113  TGRVIK---EGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            TG V         R  V        ++WD    + +   +            HT  D + 
Sbjct: 1157 TGSVRAVAVSPDGRTIVSGSHDRTVKVWDAASGRLLRSLE-----------GHT--DWVL 1203

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                   G           ++VSG    ++ V + +   +          +     SP+ 
Sbjct: 1204 AVAVSPDG----------RTIVSGSHDRTVKVWEAESGRLLRSLEGHTGGVNAVAVSPDG 1253

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            + +   + D      V + +    R  + +      +LA   S +G+  + S   D  + 
Sbjct: 1254 RTIVSGSDDR----TVKVWEAESGRLLRSLEGHTGSVLAVAVSPDGRTIV-SGSDDRTVK 1308

Query: 284  IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            ++  +        L       ++ + SPD   IV  SD      + V ++      R  +
Sbjct: 1309 VWEAE-SGRLLRSLEGHTGSVLAVAVSPDGRTIVSGSD---DRTVKVWEAESGRLLRSLE 1364

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSP 399
                       SP G  I    +      + V + +    RLL        +++A   SP
Sbjct: 1365 GHTDWVRAVAVSPDGRTIVSGSWDNT---VKVWEAESG--RLLRSLKGHTGSVRAVAVSP 1419

Query: 400  SGRSLI 405
             GR+++
Sbjct: 1420 DGRTIV 1425



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 65/202 (32%), Gaps = 16/202 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +     SP+ + +   ++D      V + +    R  + +      + A   S
Sbjct: 733 LEGHTHWVLAVAVSPDGRTIVSGSHDR----TVKVWEAESGRLLRSLEGHTGSVRAVAVS 788

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGK 325
            +G+  + S   D  + ++  +        L        + + SPD   IV  S DR   
Sbjct: 789 PDGRTIV-SGSHDRTVKVWEAE-SGRLLRSLEGHTGSVRAVAVSPDGRTIVSGSHDRT-- 844

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQER 384
             + V ++      R  +    S      SP G  I           + V     G   R
Sbjct: 845 --VKVWEAESGRLLRSLEGHTGSVRAVAVSPDGRTIVSGSHDRT---VKVWDAASGRLLR 899

Query: 385 LLV-EDSNLQAPTWSPSGRSLI 405
            L     ++ A   SP GR+++
Sbjct: 900 SLKGHTGSVLAVAVSPDGRTIV 921



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 81/245 (33%), Gaps = 18/245 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++VSG    ++ V + +   +          +     SP+ + +   + D      V +
Sbjct: 1296 RTIVSGSDDRTVKVWEAESGRLLRSLEGHTGSVLAVAVSPDGRTIVSGSDDR----TVKV 1351

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +    R  + +      + A   S +G+  + S   D  + ++  +        L    
Sbjct: 1352 WEAESGRLLRSLEGHTDWVRAVAVSPDGRTIV-SGSWDNTVKVWEAE-SGRLLRSLKGHT 1409

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                + + SPD   IV  S       + V ++      R  +           SP G  I
Sbjct: 1410 GSVRAVAVSPDGRTIVSGS---WDNTVKVWEAESGRLLRSLEGHTGGVNAVAVSPDGRTI 1466

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                +      I     +  +  +L   D+ +++   S  G+ L+      GD   +++ 
Sbjct: 1467 VSGSWD---HTIRAWNLESGESCVLFWNDAAIRSLALSGDGQLLVC-----GDVSGRVWL 1518

Query: 421  IDLNG 425
             D+ G
Sbjct: 1519 FDVVG 1523



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 64/196 (32%), Gaps = 26/196 (13%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + +      +LA   S +G+  + S   D  + ++  +        L        + + S
Sbjct: 731 RSLEGHTHWVLAVAVSPDGRTIV-SGSHDRTVKVWEAE-SGRLLRSLEGHTGSVRAVAVS 788

Query: 311 PDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           PD   IV  S DR     + V ++      R  +    S      SP G  I  +     
Sbjct: 789 PDGRTIVSGSHDRT----VKVWEAESGRLLRSLEGHTGSVRAVAVSPDGRTIV-SGSHDR 843

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI-----------------FSRKKDG 412
              +   +       L     +++A   SP GR+++                   R   G
Sbjct: 844 TVKVWEAESGRLLRSLEGHTGSVRAVAVSPDGRTIVSGSHDRTVKVWDAASGRLLRSLKG 903

Query: 413 DTGSKL-YSIDLNGRN 427
            TGS L  ++  +GR 
Sbjct: 904 HTGSVLAVAVSPDGRT 919


>gi|119510750|ref|ZP_01629877.1| Serine/Threonine protein kinase with WD40 repeats [Nodularia
            spumigena CCY9414]
 gi|119464614|gb|EAW45524.1| Serine/Threonine protein kinase with WD40 repeats [Nodularia
            spumigena CCY9414]
          Length = 1093

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 45/328 (13%), Positives = 103/328 (31%), Gaps = 41/328 (12%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        ++WDV     +                H  S+ I        G     
Sbjct: 736  QTLASGSWDKTIKIWDVTTGNLLQTLT-----------GH--SNSINSVAYSHDG----- 777

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 +++ SG    ++ + +    N+        + ++   +SP+ Q +A A+ D    
Sbjct: 778  -----QTLASGSWDKTIKIWNVTTGNLVQTLTGHSENIWCVAYSPDGQTLASASVDR--- 829

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              + L D    +  +        I +  +S +G+    S   D+ + ++  D+ +    +
Sbjct: 830  -TIKLWDVSTGKLLQTFPGHSHSINSVAYSHDGQTLA-SGSSDKTIKLW--DVSTGKLLQ 885

Query: 297  -LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             L+      +S ++SPD   +   S       + +     +   +             + 
Sbjct: 886  TLSGHSEAVVSIAFSPDGQTLASGS---ADNTIKLWDVATARLLQTLSGHSYGVSSVAFC 942

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDT 414
            P    +A +        +  +   G   R L   S+   +  +SP G++L        D 
Sbjct: 943  PDSQTLA-SGSGDNTIKLWNVST-GRLVRNLSGHSDWVFSVAFSPDGQTLA---SGSKDR 997

Query: 415  GSKLYSIDLNGRNETLI-NTPAYASDPQ 441
              K++ +  +    + +  T    S P 
Sbjct: 998  TIKIWQMGASPTTSSSVKPTQPQVSQPT 1025



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 81/238 (34%), Gaps = 26/238 (10%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  ++ L+   D +     +S + Q +A  ++D      + + D       + +    + 
Sbjct: 713 GKLLQTLSEHFDSVSSV-AYSRDGQTLASGSWDK----TIKIWDVTTGNLLQTLTGHSNS 767

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVF 318
           I +  +S +G+    S   D+ + I+  ++ +    + LT         +YSPD   +  
Sbjct: 768 INSVAYSHDGQTLA-SGSWDKTIKIW--NVTTGNLVQTLTGHSENIWCVAYSPDGQTLAS 824

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +   +     +       S     +S  G  +A          I +  
Sbjct: 825 ASVDRT----IKLWDVSTGKLLQTFPGHSHSINSVAYSHDGQTLASGSSDKT---IKLWD 877

Query: 378 KDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
               +    +   +    +  +SP G++L        D   KL+ +        L+ T
Sbjct: 878 VSTGKLLQTLSGHSEAVVSIAFSPDGQTLA---SGSADNTIKLWDV----ATARLLQT 928


>gi|291302348|ref|YP_003513626.1| peptidase S41 [Stackebrandtia nassauensis DSM 44728]
 gi|290571568|gb|ADD44533.1| peptidase S41 [Stackebrandtia nassauensis DSM 44728]
          Length = 1089

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 60/185 (32%), Gaps = 19/185 (10%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              +   + D    ++SV        RLT  +        SPD S I +    EG   ++
Sbjct: 14  DTIVFVAEDD----LWSVTTAGGTARRLTAGVAAASFPRISPDGSLIAYTGAEEGPPDVH 69

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----KFAIGVMKKDGSQERL 385
           V+ + G + +R++ +         W P G+ + +   +         +  +  DG     
Sbjct: 70  VVPTEGGETRRLTYEGGRISRVAGWDPTGEFVIYATSAHSPELLDVRLRRVSADGGVPAE 129

Query: 386 LVEDSNLQAPTWSPSGRSLI----------FSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           L           S +G  ++          + R + G  G        +G    L++   
Sbjct: 130 LTWGRATAIAQGS-NGVVVLGREYWKDHAHWKRYRGGTAGQLWIDASGDGEFRKLVSLDG 188

Query: 436 YASDP 440
             S P
Sbjct: 189 NLSCP 193



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 74/230 (32%), Gaps = 28/230 (12%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P    +   + +   DD          T      +R+    +    PR S +G     +
Sbjct: 8   FPAIHND--TIVFVAEDD------LWSVTTAGGTARRLTAGVAAASFPRISPDGSLIAYT 59

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKE----QLYV 330
             ++   D++ V  +   T RLT     I+  A + P    +++ +     E    +L  
Sbjct: 60  GAEEGPPDVHVVPTEGGETRRLTYEGGRISRVAGWDPTGEFVIYATSAHSPELLDVRLRR 119

Query: 331 MQSNGSDQKRISQDKEASYFDPV----------WSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           + ++G     ++  +  +               W        +   +  +  I     DG
Sbjct: 120 VSADGGVPAELTWGRATAIAQGSNGVVVLGREYWKDHAHWKRYRGGTAGQLWIDA-SGDG 178

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
              +L+  D NL  P     G  + F    +G     +YS D +G N   
Sbjct: 179 EFRKLVSLDGNLSCPHII--GDRVYFLSDHEGHG--NVYSTDFDGANLRR 224



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 73/245 (29%), Gaps = 26/245 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   R LT         PR SP+   +AY   + E    V+++ T      +
Sbjct: 23  DLWSVTTAGGTARRLTAG-VAAASFPRISPDGSLIAYTGAE-EGPPDVHVVPTEGGETRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE----AMDIYSVDLQSNATERLTNTLFINI-- 305
                  +     +   G+  + +          + +  V         LT      I  
Sbjct: 81  LTYEGGRISRVAGWDPTGEFVIYATSAHSPELLDVRLRRVSADGGVPAELTWGRATAIAQ 140

Query: 306 --------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                      Y  D +   ++  R G      + ++G  + R     + +   P     
Sbjct: 141 GSNGVVVLGREYWKDHAH--WKRYRGGTAGQLWIDASGDGEFRKLVSLDGNLSCPHI--I 196

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           GD + F         +     DG+  R   +  +  A   S  G  L++        G +
Sbjct: 197 GDRVYFLSDHEGHGNVYSTDFDGANLRRHTDHEDFYARGLSGDGARLVY------HCGGR 250

Query: 418 LYSID 422
           LY +D
Sbjct: 251 LYLLD 255



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 94/261 (36%), Gaps = 43/261 (16%)

Query: 188 IIKNSLCVMDRDG--ANIRYLTPSRDQILFEPRFSPNQQKVAY-------ATYDDEDILR 238
             +N L ++D DG  A    +  SR   + +  FS +   +AY          +DE++ R
Sbjct: 390 NHRNELVLVDVDGEEATATVIDSSRHGEISDVVFSADGTWLAYACPESSGTDNEDENVAR 449

Query: 239 VYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQKDEAMDIYSVDLQSN---AT 294
             +    +    K +   R +    P F  +GK      Q++      S+    N    +
Sbjct: 450 STIKLLELSTGRKAVAAKRILNDFGPSFDPDGKYLYFVGQREFNPVYDSLHFDLNFPMGS 509

Query: 295 ERLTNTLFINISASYSP------------------DSSQIVFESDREGKEQLYVMQSNGS 336
                 L  ++S  + P                  D S+   +SD +  ++  V+  +G 
Sbjct: 510 RPYAVALRADVSPPFVPQPKPMHDTGEESTKDSGDDESKT--DSD-DTTDESLVIDLDGI 566

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK--KDGSQERLLVEDSNLQ- 393
           + + +      + +  V    G ++  +     +     +    DG  + + +E   ++ 
Sbjct: 567 ENRIVPLPVSDAKYTQVLGVSGKVLVLSHPVAGRIRPHQVDDEPDGVLDSVDLETGKVER 626

Query: 394 ---APTW---SPSGRSLIFSR 408
              A +W   +P G+++++  
Sbjct: 627 FADAVSWVMSTPDGKTVLYMS 647



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 48/336 (14%), Positives = 102/336 (30%), Gaps = 80/336 (23%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA----- 229
            R+ F+S+    G     +   D DGAN+R  T   D        S +  ++ Y      
Sbjct: 198 DRVYFLSDHEGHGN----VYSTDFDGANLRRHTDHEDFYARG--LSGDGARLVYHCGGRL 251

Query: 230 -----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK------ 278
                  +   ++ V++  TR  RA + +     +  +   S++     ++ +       
Sbjct: 252 YLLDPAEEHPSVVDVHIPVTRTQRARRFVDAAEYLD-SVDLSADASHLAVTTRGKAFTFA 310

Query: 279 -----------------------DEAMDIYSVDLQSNATERLTNTLFINISASY------ 309
                                   +   + +    +   E L                  
Sbjct: 311 DWEGPVTQHGEVDGVRYRLLTWLHDRERLIAAVADNGPREVLVGITADASKPPCRLDHLD 370

Query: 310 ---------SPDSSQIVFESDREGKEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQG 358
                    SP   ++V  + R    +L ++  +G +     I   +     D V+S  G
Sbjct: 371 TGRAGELVASPTEGKVVIANHR---NELVLVDVDGEEATATVIDSSRHGEISDVVFSADG 427

Query: 359 DLIAFTKFSGE----------KFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFS 407
             +A+                +  I +++    ++ +  +   N   P++ P G+ L F 
Sbjct: 428 TWLAYACPESSGTDNEDENVARSTIKLLELSTGRKAVAAKRILNDFGPSFDPDGKYLYFV 487

Query: 408 RKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
            +++ +        DLN   G     +   A  S P
Sbjct: 488 GQREFNPVYDSLHFDLNFPMGSRPYAVALRADVSPP 523


>gi|77747686|ref|NP_779500.2| alanyl dipeptidyl peptidase [Xylella fastidiosa Temecula1]
 gi|182681917|ref|YP_001830077.1| peptidase S9 prolyl oligopeptidase [Xylella fastidiosa M23]
 gi|182632027|gb|ACB92803.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Xylella fastidiosa M23]
 gi|307578173|gb|ADN62142.1| peptidase S9 prolyl oligopeptidase [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 688

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 55/265 (20%), Positives = 89/265 (33%), Gaps = 41/265 (15%)

Query: 214 LFEPRFSPNQQKVAYA--TYDDEDI-----LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   + +A    D ++I     + V  +      AP R+      + AP FS
Sbjct: 35  VSSPELSPDGAVLVFAKRQMDAKNIKASTSVWVKWLQAGAPAAPVRLTPLGWDVSAPAFS 94

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y + +      +LTN      S   SP   ++VF +      
Sbjct: 95  RDGKAVYFLSAKSGSNQLYVLPVSGGTPRQLTNLAVDIDSYKLSPQGDRVVFSAS----- 149

Query: 327 QLYVMQSNGSDQKRISQDKEAS------------YFDPVWSPQGDLIAFTKFSGEK---- 370
              V  S+ S  KR   +KE S                 W+       F           
Sbjct: 150 VFQVCGSDLSCTKRKLDEKENSKASGVVFEQLFVRHWDTWNDGRRNTLFIASLPRGRAKP 209

Query: 371 -FAIGVMK--KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSID 422
             A+  M    DG                WSP G S++ S +  G      T   LY  D
Sbjct: 210 VSAVSAMSAMLDGDVPSKPF--GGADHFVWSPDGHSVVASIRVAGRQEPWSTNFDLYRFD 267

Query: 423 LNGRNETL---INTPAYASDPQWVG 444
           ++G +  +   +  PA+ + P +  
Sbjct: 268 VSGHDTPVNLTVANPAWDATPMFSA 292



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 42/310 (13%), Positives = 91/310 (29%), Gaps = 42/310 (13%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R +    S  ++Q    +      ++     S  SG++   L V   D  N
Sbjct: 134 SYKLSPQGDRVV---FSASVFQVCGSDLSCTKRKLDEKENSKASGVVFEQLFVRHWDTWN 190

Query: 203 IRYLTPSRDQILFEPRFSPNQQK--VAYATYDDEDILRVYLMDTRIDR-APKRIGNFRSM 259
                              + ++  +  A+        V  +                  
Sbjct: 191 -------------------DGRRNTLFIASLPRGRAKPVSAVSAMSAMLDGDVPSKPFGG 231

Query: 260 ILAPRFSSNGKRALISVQKDE-------AMDIYSVDLQSN-ATERLT-NTLFINISASYS 310
                +S +G   + S++            D+Y  D+  +     LT      + +  +S
Sbjct: 232 ADHFVWSPDGHSVVASIRVAGRQEPWSTNFDLYRFDVSGHDTPVNLTVANPAWDATPMFS 291

Query: 311 PDSSQIVFESDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            D   + + + R       +  L  M+      + I+   + S  +   S  G  +    
Sbjct: 292 ADGKMLYYRAMRRPGFEADRFGLMEMEVQSGKVREIAPHWDRSADEIALSADGKALYVNA 351

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               +  +  +     +    V + ++ AP  +  G  L F+R     +  +++  D   
Sbjct: 352 DDHGEHPLFKVDIVSGKVEKWVGEGSVHAPVLA--GGKLAFARN-SLKSADQIFVTDAVA 408

Query: 426 RNETLINTPA 435
           R      T A
Sbjct: 409 REPLQAITSA 418


>gi|302554355|ref|ZP_07306697.1| WD40 domain-containing protein beta Propeller [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471973|gb|EFL35066.1| WD40 domain-containing protein beta Propeller [Streptomyces
           viridochromogenes DSM 40736]
          Length = 416

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 87/276 (31%), Gaps = 48/276 (17%)

Query: 210 RDQILFEPRFSPNQQKVAYATY-------DDEDILRVYLMDTRIDRAPKRIGNFR-SMIL 261
            +     P  S + + +A+ +        D +     ++ D +               + 
Sbjct: 50  GNAASGGPSLSADGRHLAFVSTADNLVAGDTDGAADAFVRDLKTGTTRLVSTAAGVGPVD 109

Query: 262 APRFSSNGKRALISVQK--DEAMDIYSVDLQSNATERL--TNTLFINI--SASYSPDSSQ 315
               S NG+    S     D    ++  DL++   +R+  T     +     + S D   
Sbjct: 110 DVALSGNGRYLAFSATGTGDGLGHLWVKDLKAGTVQRVKDTVDTGYDTARQPAISADGRY 169

Query: 316 IVFESDREG-------KEQLYVMQSNGSDQKRISQ-----DKEASYFDPVWSPQGDLIAF 363
           + F ++R G       + ++Y +        RISQ     D++ +  +P  S  G  + +
Sbjct: 170 VAFVAERSGLTQGDDVRGRVYRVDRTSGKAVRISQVPAPGDRKTAATNPSISADGSRVGY 229

Query: 364 -----TKFSGEKFAIGVMKKDGSQERLL-------VEDSNLQAPTWSPSGRSLIFSRK-- 409
                   SG+     V      +             D   + P  S  GR  +F+    
Sbjct: 230 QFFVPHPASGDWSDAWVRDVPSGELIQADRAPDGRTSDGQTEFPQISADGRYAVFNSLDS 289

Query: 410 ----KDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                D + G  ++  DL       I     A+DP 
Sbjct: 290 RLTPDDTNKGHNVFVRDLKTGGLRRI----DAADPA 321



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 78/281 (27%), Gaps = 53/281 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILA--PRFSSNGKRAL 273
             S N + +A++     D L    +        +R+          A  P  S++G+   
Sbjct: 112 ALSGNGRYLAFSATGTGDGLGHLWVKDLKAGTVQRVKDTVDTGYDTARQPAISADGRYVA 171

Query: 274 ISVQKDEAMD-------IYSVDLQSNATERLTNTLFIN------ISASYSPDSSQIVFES 320
              ++            +Y VD  S    R++             + S S D S++ ++ 
Sbjct: 172 FVAERSGLTQGDDVRGRVYRVDRTSGKAVRISQVPAPGDRKTAATNPSISADGSRVGYQF 231

Query: 321 D-----REGKEQLYVMQSNGSDQKRISQDKEASYFD-----PVWSPQGDLIAFTKFS--- 367
                        +V      +  +  +  +    D     P  S  G    F       
Sbjct: 232 FVPHPASGDWSDAWVRDVPSGELIQADRAPDGRTSDGQTEFPQISADGRYAVFNSLDSRL 291

Query: 368 -----GEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTG---- 415
                 +   + V        R +      +    P  S   R L F     GDT     
Sbjct: 292 TPDDTNKGHNVFVRDLKTGGLRRIDAADPAAFTAHPQLSGDNRHLAFVSADPGDTSYTYR 351

Query: 416 ----------SKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
                     + L S D  G  N+  ++ P    + + V F
Sbjct: 352 AYVRDLRTGRTVLASPDTEGGPNDQSVSAPVLDRNGRQVAF 392



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 73/264 (27%), Gaps = 42/264 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL------RVYLMDTRIDRAPKR-- 252
             ++    +      +P  S + + VA+               RVY +D    +A +   
Sbjct: 145 QRVKDTVDTGYDTARQPAISADGRYVAFVAERSGLTQGDDVRGRVYRVDRTSGKAVRISQ 204

Query: 253 ---IGNFRSMILAPRFSSNGKRALISV-----QKDEAMDIYSVDLQSNATERLTNTLFIN 304
               G+ ++    P  S++G R             +  D +  D+ S    +        
Sbjct: 205 VPAPGDRKTAATNPSISADGSRVGYQFFVPHPASGDWSDAWVRDVPSGELIQADRAPDGR 264

Query: 305 IS------ASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            S         S D    VF S        D      ++V        +RI     A++ 
Sbjct: 265 TSDGQTEFPQISADGRYAVFNSLDSRLTPDDTNKGHNVFVRDLKTGGLRRIDAADPAAFT 324

Query: 351 D-PVWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQERLLV-------EDSNLQAPTWS 398
             P  S     +AF           +   V      +  L          D ++ AP   
Sbjct: 325 AHPQLSGDNRHLAFVSADPGDTSYTYRAYVRDLRTGRTVLASPDTEGGPNDQSVSAPVLD 384

Query: 399 PSGRSLIFSRKKDGDTGSKLYSID 422
            +GR + FS           Y   
Sbjct: 385 RNGRQVAFSSSSPDLVPGDTYDTS 408



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 22/125 (17%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVEDSNL--- 392
           +  A+   P  S  G  +AF           +       V        RL+   + +   
Sbjct: 49  EGNAASGGPSLSADGRHLAFVSTADNLVAGDTDGAADAFVRDLKTGTTRLVSTAAGVGPV 108

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT----------PAYASDPQ 441
                S +GR L FS    GD    L+  DL  G  + + +T          PA ++D +
Sbjct: 109 DDVALSGNGRYLAFSATGTGDGLGHLWVKDLKAGTVQRVKDTVDTGYDTARQPAISADGR 168

Query: 442 WVGFM 446
           +V F+
Sbjct: 169 YVAFV 173


>gi|290960541|ref|YP_003491723.1| protease [Streptomyces scabiei 87.22]
 gi|260650067|emb|CBG73183.1| putative protease [Streptomyces scabiei 87.22]
          Length = 1070

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 57/162 (35%), Gaps = 14/162 (8%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G     + + D    ++   L      R++           SPD + + + S R+G  ++
Sbjct: 14  GDLVAFTAEDD----VWLAPLDGGRAWRVSADNVPVNHPRISPDGTTLAWTSTRDGAPEV 69

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL 385
           +V   +G   +R++           W+P G ++A +              +  DG     
Sbjct: 70  HVAPVDGGSSRRLTYWGSWRTQVRGWTPDGRVLALSTQGQASLRRSWARAVPLDGGPATT 129

Query: 386 L----VEDSNLQAPTW---SPSGRSLIFSRKKDGDTGSKLYS 420
           L    V D      T    +P GR   + ++  G T  KL+ 
Sbjct: 130 LPYGPVGDVAHGPATVLLSAPMGREAAWWKRYRGGTAGKLWI 171



 Score = 76.6 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 90/259 (34%), Gaps = 29/259 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +   DG    +   + +  +  PR SP+   +A+ +  D     V++       + +
Sbjct: 24  DVWLAPLDGGRA-WRVSADNVPVNHPRISPDGTTLAWTSTRDG-APEVHVAPVD-GGSSR 80

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTNTLFINI-- 305
           R+  + S     R ++ +G+   +S Q           +V L       L      ++  
Sbjct: 81  RLTYWGSWRTQVRGWTPDGRVLALSTQGQASLRRSWARAVPLDGGPATTLPYGPVGDVAH 140

Query: 306 SASY----SPDSSQIVFE-SDREGK-EQLYV-----MQSNGSDQKRISQDKEASYFDPVW 354
             +     +P   +  +    R G   +L++        N  +  R+  + + +   P+W
Sbjct: 141 GPATVLLSAPMGREAAWWKRYRGGTAGKLWIDRSDAGDENTGEFTRLHAELDGNLEYPLW 200

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
              GD I F        A+     DGS  R         A   +  G  ++++       
Sbjct: 201 V--GDRIGFLSDHEGVGALYSSLADGSDLRRHTPLDGFYARHAATDGTRVVYTA------ 252

Query: 415 GSKLYSI-DLNGRNETLIN 432
             +L+ + DL+G     ++
Sbjct: 253 AGELWLLDDLDGAEPRRLD 271



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 74/226 (32%), Gaps = 28/226 (12%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              VA+   DD     V+L      RA +   +   +   PR S +G     +  +D A 
Sbjct: 14  GDLVAFTAEDD-----VWLAPLDGGRAWRVSADNVPVN-HPRISPDGTTLAWTSTRDGAP 67

Query: 283 DIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQ---LYVMQSNGSDQ 338
           +++   +   ++ RLT           ++PD   +   +  +   +      +  +G   
Sbjct: 68  EVHVAPVDGGSSRRLTYWGSWRTQVRGWTPDGRVLALSTQGQASLRRSWARAVPLDGGPA 127

Query: 339 KRISQDKEASYFDP-----VWSPQGDLIAFTK--FSGEKFAIGVMKKD-----GSQERLL 386
             +                + +P G   A+ K    G    + + + D       +   L
Sbjct: 128 TTLPYGPVGDVAHGPATVLLSAPMGREAAWWKRYRGGTAGKLWIDRSDAGDENTGEFTRL 187

Query: 387 VE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
               D NL+ P W   G  + F    +G     LYS   +G +   
Sbjct: 188 HAELDGNLEYPLWV--GDRIGFLSDHEG--VGALYSSLADGSDLRR 229



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 98/306 (32%), Gaps = 25/306 (8%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRY--LTPSRDQI 213
           +++D            F +R      + V       L ++D  DGA  R   +     ++
Sbjct: 220 SLADGSDLRRHTPLDGFYARHAATDGTRVVYTAAGELWLLDDLDGAEPRRLDIRLGGQRV 279

Query: 214 LFEP------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPR-F 265
             +P      R+  +      A      +       T      + +   + +    PR F
Sbjct: 280 DLQPVPVNAARWFGSASPDHTARGSAVSVRGSIHWITHRSGPARALAAEQGVRARLPRTF 339

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNAT-----ERLTNT-LFINISASYSPDSSQIVFE 319
              G+  ++ V   E  D       + A       RL    L   +  S +PD S++   
Sbjct: 340 RVEGEEWVVWVTDAEGDDALEFAPATGAAPGATPRRLAAGQLGRVLGLSVAPDGSRVAVA 399

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMK- 377
           +      ++ +++    + + + + ++      V+SP    +A++         + +   
Sbjct: 400 AH---DGRVLLVERETGEVREVDRSEDGEVSGLVFSPDSAWLAWSHPGPRPLRQLKLANT 456

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLINTP 434
            D S            +P ++  G+ L F   +  D     +  DL   +G    LI   
Sbjct: 457 ADLSVTEATPLRFQDFSPAFTLDGKHLAFLSARAFDPVYDEHVFDLHFVSGARPHLITLA 516

Query: 435 AYASDP 440
           A    P
Sbjct: 517 ATTPSP 522



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 94/252 (37%), Gaps = 32/252 (12%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---- 230
            RI F+S+    G + +SL     DG+++R  TP             +  +V Y      
Sbjct: 203 DRIGFLSDHEGVGALYSSL----ADGSDLRRHTPLDGFYARHAA--TDGTRVVYTAAGEL 256

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----SSNG--KRALISVQKDEAMDI 284
           +  +D+         I    +R+      + A R+    S +   + + +SV+      I
Sbjct: 257 WLLDDLDGAEPRRLDIRLGGQRVDLQPVPVNAARWFGSASPDHTARGSAVSVRGS----I 312

Query: 285 YSVDLQSNATERLTNTLFINISA--SYSPDSS-QIVFESDREGKEQL----YVMQSNGSD 337
           + +  +S     L     +      ++  +    +V+ +D EG + L        + G+ 
Sbjct: 313 HWITHRSGPARALAAEQGVRARLPRTFRVEGEEWVVWVTDAEGDDALEFAPATGAAPGAT 372

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAP 395
            +R++  +         +P G  +A     G    + +++++  + R +   ED  +   
Sbjct: 373 PRRLAAGQLGRVLGLSVAPDGSRVAVAAHDG---RVLLVERETGEVREVDRSEDGEVSGL 429

Query: 396 TWSPSGRSLIFS 407
            +SP    L +S
Sbjct: 430 VFSPDSAWLAWS 441



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 66/204 (32%), Gaps = 14/204 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V        + +++R+   +R +  S D  +    FSP+   +A+ ++     LR   +
Sbjct: 395 RVAVAAHDGRVLLVERETGEVREVDRSEDGEVSGLVFSPDSAWLAW-SHPGPRPLRQLKL 453

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQ--SNATERLT 298
               D +       R    +P F+ +GK       +  D   D +  DL   S A   L 
Sbjct: 454 ANTADLSVTEATPLRFQDFSPAFTLDGKHLAFLSARAFDPVYDEHVFDLHFVSGARPHLI 513

Query: 299 NTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                  S  + P      FE+ D++           G+   RI  D  A    P     
Sbjct: 514 TLAATTPSP-FGPQRHGRPFEAPDKDETP-----DGEGAPATRIDLDGLADRIVPFPVEA 567

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGS 381
           G     T  + +   + +      
Sbjct: 568 GRY--STLRTAKDGVLWLHHPVTG 589


>gi|148655566|ref|YP_001275771.1| hypothetical protein RoseRS_1421 [Roseiflexus sp. RS-1]
 gi|148567676|gb|ABQ89821.1| hypothetical protein RoseRS_1421 [Roseiflexus sp. RS-1]
          Length = 561

 Score = 80.4 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 104/338 (30%), Gaps = 72/338 (21%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +GD +  +  +     +      L  MD DG N + +       +  P +S + Q++A  
Sbjct: 220 RGDGSRPLAVIRAEGQN----RWLYRMDTDGTNAQLIYRGLLGDVRYPAWSHDGQRIAVV 275

Query: 230 TY--------------------------DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                                       D     +VY   +R       I    +    P
Sbjct: 276 DNNTWPWPTPDPDPQNNLVASAITVINADGSGARQVYQTQSRKGSRCPFIPGPGNPTETP 335

Query: 264 R---------FSSNGKRALIS-----------VQKDEAMDIYSVDLQSNATERLTNTLFI 303
                     +  +  R  ++           + +    DI S+   S  T  L      
Sbjct: 336 SLILRISSVQWLPDNNRIALTQVGFGAFCDGRLAQGGTADILSLTPPSLVTSPLAQRA-- 393

Query: 304 NISASYSPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             + S + +  +++F        R   + ++ +                +   P W+P G
Sbjct: 394 -TAPSINRNG-KMLFHGFDLSRPRNRADGVWELDLGAQPPSETHLIAHGADQSPAWAPDG 451

Query: 359 DLIAFTKF--------SGEKFAIGVMKKDG-SQERLLV---EDSNLQAPTWSPSGRSLIF 406
              A  +         S   +AI +  +   +  R+L+      ++ + +WSP G  L++
Sbjct: 452 RRFAVVRRTTSPSADVSESTYAIMLYDRQNLNNPRMLLFADHGRSVSSLSWSPDGAYLVY 511

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +  +  D G  ++ +D++      I     A +  W  
Sbjct: 512 TLYQS-DGGGDIWWLDVSSGATGPITKDGQALEAAWRP 548



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 68/255 (26%), Gaps = 58/255 (22%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P    +  +       +     +Y MDT    A          +  P +S +G+R  +
Sbjct: 215 LPPALRGDGSRPLAVIRAEGQNRWLYRMDTDGTNAQLIYRGLLGDVRYPAWSHDGQRIAV 274

Query: 275 SVQKDE--------------AMDIYSVDLQSNATERL--TN-----------TLFINIS- 306
                               A  I  ++   +   ++  T                    
Sbjct: 275 VDNNTWPWPTPDPDPQNNLVASAITVINADGSGARQVYQTQSRKGSRCPFIPGPGNPTET 334

Query: 307 AS---------YSPDSSQI--------VFESDR---EGKEQLYVMQSNGSDQKRISQDKE 346
            S         + PD+++I         F   R    G   +  +    +    ++    
Sbjct: 335 PSLILRISSVQWLPDNNRIALTQVGFGAFCDGRLAQGGTADILSL----TPPSLVTSPLA 390

Query: 347 ASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMKKDGS----QERLLVEDSNLQAPTWSPS 400
                P  +  G ++   F        A GV + D       E  L+     Q+P W+P 
Sbjct: 391 QRATAPSINRNGKMLFHGFDLSRPRNRADGVWELDLGAQPPSETHLIAHGADQSPAWAPD 450

Query: 401 GRSLIFSRKKDGDTG 415
           GR     R+    + 
Sbjct: 451 GRRFAVVRRTTSPSA 465


>gi|28057292|gb|AAO29149.1| alanyl dipeptidyl peptidase [Xylella fastidiosa Temecula1]
          Length = 682

 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 55/265 (20%), Positives = 89/265 (33%), Gaps = 41/265 (15%)

Query: 214 LFEPRFSPNQQKVAYA--TYDDEDI-----LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   + +A    D ++I     + V  +      AP R+      + AP FS
Sbjct: 29  VSSPELSPDGAVLVFAKRQMDAKNIKASTSVWVKWLQAGAPAAPVRLTPLGWDVSAPAFS 88

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y + +      +LTN      S   SP   ++VF +      
Sbjct: 89  RDGKAVYFLSAKSGSNQLYVLPVSGGTPRQLTNLAVDIDSYKLSPQGDRVVFSAS----- 143

Query: 327 QLYVMQSNGSDQKRISQDKEAS------------YFDPVWSPQGDLIAFTKFSGEK---- 370
              V  S+ S  KR   +KE S                 W+       F           
Sbjct: 144 VFQVCGSDLSCTKRKLDEKENSKASGVVFEQLFVRHWDTWNDGRRNTLFIASLPRGRAKP 203

Query: 371 -FAIGVMK--KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSID 422
             A+  M    DG                WSP G S++ S +  G      T   LY  D
Sbjct: 204 VSAVSAMSAMLDGDVPSKPF--GGADHFVWSPDGHSVVASIRVAGRQEPWSTNFDLYRFD 261

Query: 423 LNGRNETL---INTPAYASDPQWVG 444
           ++G +  +   +  PA+ + P +  
Sbjct: 262 VSGHDTPVNLTVANPAWDATPMFSA 286



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 93/313 (29%), Gaps = 48/313 (15%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R +    S  ++Q    +      ++     S  SG++   L V   D  N
Sbjct: 128 SYKLSPQGDRVV---FSASVFQVCGSDLSCTKRKLDEKENSKASGVVFEQLFVRHWDTWN 184

Query: 203 IRYLTPSRDQILFEPRFSPNQQK--VAYATYDDEDILRVYLMDTRIDR-APKRIGNFRSM 259
                              + ++  +  A+        V  +                  
Sbjct: 185 -------------------DGRRNTLFIASLPRGRAKPVSAVSAMSAMLDGDVPSKPFGG 225

Query: 260 ILAPRFSSNGKRALISVQKDE-------AMDIYSVDLQSN-ATERLT-NTLFINISASYS 310
                +S +G   + S++            D+Y  D+  +     LT      + +  +S
Sbjct: 226 ADHFVWSPDGHSVVASIRVAGRQEPWSTNFDLYRFDVSGHDTPVNLTVANPAWDATPMFS 285

Query: 311 PDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            D   +         FE+DR G   L  M+      + I+   + S  +   S  G  + 
Sbjct: 286 ADGKMLYYRAMRRPGFEADRFG---LMEMEVQSGKVREIAPHWDRSADEIALSADGKALY 342

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  +  +  +     +    V + ++ AP  +  G  L F+R     +  +++  D
Sbjct: 343 VNADDHGEHPLFKVDIVSGKVEKWVGEGSVHAPVLA--GGKLAFARN-SLKSADQIFVTD 399

Query: 423 LNGRNETLINTPA 435
              R      T A
Sbjct: 400 AVAREPLQAITSA 412


>gi|157375494|ref|YP_001474094.1| peptidase S9 prolyl oligopeptidase [Shewanella sediminis HAW-EB3]
 gi|157317868|gb|ABV36966.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sediminis HAW-EB3]
          Length = 684

 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 93/259 (35%), Gaps = 26/259 (10%)

Query: 214 LFEPRFSPNQQKVAYATY----DDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSN 268
           L  P  S +  K+ YA      + E    +Y+ D  + D   K++ + +    +  F+++
Sbjct: 38  LHSPALSNDGSKIVYAVKKFDAEGESSSDLYIQDLSQADSKAKQLTSVKGTEHSVAFAAD 97

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKE 326
            +       +  +  +Y + L      ++++          S D +Q+V       E K+
Sbjct: 98  DQSIYFLAGRSGSSQLYKLSLNGGEAIQISDFPLDVEGFKLSQDGTQVVMNMRVFPECKD 157

Query: 327 QLYVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS- 381
                    ++Q+R S  +E           WS       F      +  I  +      
Sbjct: 158 LKCSEDKFTAEQERKSSGREYKQLMVRHWDTWSDHSRSHLFVAKLNGEKIITAVDVTAGL 217

Query: 382 -QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNG--------RN 427
             E      S ++  T++P G+ L++  K  G      T   L+ + + G         N
Sbjct: 218 DTETPPKPFSGMEEVTFTPDGKHLVYGAKAPGKDQAWITNYDLWQVPVTGGDAVNLTEAN 277

Query: 428 ETLINTPAYASDPQWVGFM 446
           +     P +++D +++ ++
Sbjct: 278 KAWDANPTFSADGRYLAYL 296



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 80/267 (29%), Gaps = 41/267 (15%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E   SG     L V   D                   +S + +   +    + + +   +
Sbjct: 170 ERKSSGREYKQLMVRHWD------------------TWSDHSRSHLFVAKLNGEKIITAV 211

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-------AMDIYSVDLQSNAT 294
             T           F  M     F+ +GK  +   +            D++ V +     
Sbjct: 212 DVTAGLDTETPPKPFSGME-EVTFTPDGKHLVYGAKAPGKDQAWITNYDLWQVPVTGGDA 270

Query: 295 ERLT-NTLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQDK 345
             LT      + + ++S D   +         FE+DR    ++ +  +    +K ++   
Sbjct: 271 VNLTEANKAWDANPTFSADGRYLAYLAMTKPGFEADR---YRIMLRDTVTGQEKEVAPLW 327

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           + S     +      +  T     +  +  +       + +  D +      +     +I
Sbjct: 328 DRSASSLTFGKDNRTLYVTAQDVGQVTVFEVNTQFGDVKTVYNDGSNSVVGVTND--KII 385

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLIN 432
            + K     G  LYS++L+G+    + 
Sbjct: 386 INHKSLVQPG-DLYSMNLDGQGIKQLT 411



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 14/188 (7%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G              + I    L  +   G +   LT +       P FS + 
Sbjct: 231 EVTFTPDGKHLVYGAKAPGKDQAWITNYDLWQVPVTGGDAVNLTEANKAWDANPTFSADG 290

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D  R+ L DT   +  +    +     +  F  + +   ++ Q  
Sbjct: 291 RYLAYLAMTKPGFEADRYRIMLRDTVTGQEKEVAPLWDRSASSLTFGKDNRTLYVTAQDV 350

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSP----DSSQIVFESDREGKEQLYVMQSNG 335
             + ++ V+ Q    + + N    ++    +     +   +V          LY M  +G
Sbjct: 351 GQVTVFEVNTQFGDVKTVYNDGSNSVVGVTNDKIIINHKSLV------QPGDLYSMNLDG 404

Query: 336 SDQKRISQ 343
              K+++Q
Sbjct: 405 QGIKQLTQ 412


>gi|294507328|ref|YP_003571386.1| peptidase S9, prolyl oligopeptidase active site region
           [Salinibacter ruber M8]
 gi|294343656|emb|CBH24434.1| Peptidase S9, prolyl oligopeptidase active site region
           [Salinibacter ruber M8]
          Length = 856

 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 68/205 (33%), Gaps = 25/205 (12%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERL--------TNTLFINI---- 305
              P +S++G   ++ V+ D   D +   +D ++     L             I+     
Sbjct: 396 SYGPYWSADGDHGVLVVRADNNKDRWIARLDPETGDLTVLDRQHDTAWIGGPGISAYGGP 455

Query: 306 -SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL--IA 362
            +  + PD     F+S+  G   LY +     +  +++   +    D   S  G    + 
Sbjct: 456 GNVGWMPDGEHFYFQSEATGYSHLYTVDVETGETTQLTS-GDFEVLDARLSQDGSTWTLT 514

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             + S  +  +  M  DG     L + +       SP G  L  +     +  + LY  D
Sbjct: 515 TNRHSPHQQHVERMPADGGDITRLTQMTGTHDAVLSPDGTRLA-TLYSTTNQPADLYLKD 573

Query: 423 --LNGRNETLINTPAYASDPQWVGF 445
              +     +  +P      +W  +
Sbjct: 574 ATADADPVRITESPTD----EWAAY 594



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 91/291 (31%), Gaps = 36/291 (12%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           D  D  Q+I     S  A  R+            +    GDF   +  +       +  +
Sbjct: 315 DAADPTQVIDYVTESGQADVRRA--------RPKVGIPPGDFALHVQDLKRDTTIAVNLH 366

Query: 192 SLCVMDRD--------GANIRYLTPSRDQILFEPRFSPNQQK-VAYATYDDEDILRVYLM 242
            L     D        GA +      R    + P +S +    V     D+     +  +
Sbjct: 367 QLPGA-YDVPAYRQEQGAELDSSEAKRALYSYGPYWSADGDHGVLVVRADNNKDRWIARL 425

Query: 243 DTRIDRAPKRIGNFRSMILA------------PRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           D              +  +               +  +G+      +      +Y+VD++
Sbjct: 426 DPETGDLTVLDRQHDTAWIGGPGISAYGGPGNVGWMPDGEHFYFQSEATGYSHLYTVDVE 485

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEAS 348
           +  T +LT+  F  + A  S D S     ++R    ++ +  M ++G D  R++Q     
Sbjct: 486 TGETTQLTSGDFEVLDARLSQDGSTWTLTTNRHSPHQQHVERMPADGGDITRLTQMTGT- 544

Query: 349 YFDPVWSPQGDLIA-FTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTW 397
             D V SP G  +A     + +   + +      +    + E    +   +
Sbjct: 545 -HDAVLSPDGTRLATLYSTTNQPADLYLKDATADADPVRITESPTDEWAAY 594



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 57/158 (36%), Gaps = 24/158 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNG------- 269
           R+  + Q + +      D     L    R   AP+++         P F  +G       
Sbjct: 102 RWHESGQALYFNWNPGGDFPSDSLYKVSRSGGAPQKVSPAERRSNPPTF--DGWHHGEHV 159

Query: 270 -----KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
                 R + +   D    +Y  + +++   RLT+T     +  +  +  +++FE D   
Sbjct: 160 YTDDFSRKVYAADGD----LYLYNRETDTQTRLTDTPAREGNPRFGLEEDRVLFERD--- 212

Query: 325 KEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLI 361
            + L+ +  +    ++++  +      +   SP+   +
Sbjct: 213 -DNLFSVHLSTGQIRQLTNVQSGREPQEGAPSPRERFL 249



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 53/154 (34%), Gaps = 17/154 (11%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASY--FDP 352
           T       +A +      + F  +  G    + LY +  +G   +++S  +  S      
Sbjct: 92  TWIGDWPTNARWHESGQALYFNWNPGGDFPSDSLYKVSRSGGAPQKVSPAERRSNPPTFD 151

Query: 353 VWSPQGDLIAFTKFSGEKF----AIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFS 407
            W   G+ +    FS + +     + +  ++   +  L +    +  P +      ++F 
Sbjct: 152 GWH-HGEHVYTDDFSRKVYAADGDLYLYNRETDTQTRLTDTPAREGNPRFGLEEDRVLFE 210

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R  +      L+S+ L+      +       +PQ
Sbjct: 211 RDDN------LFSVHLSTGQIRQLTNVQSGREPQ 238


>gi|325279275|ref|YP_004251817.1| WD40-like beta Propeller containing protein [Odoribacter
           splanchnicus DSM 20712]
 gi|324311084|gb|ADY31637.1| WD40-like beta Propeller containing protein [Odoribacter
           splanchnicus DSM 20712]
          Length = 690

 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 55/300 (18%), Positives = 104/300 (34%), Gaps = 63/300 (21%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA-------------------- 229
           K  L  M+ DG+N R +T   D I     ++P+  K+ Y                     
Sbjct: 120 KGQLWEMNPDGSNPRQVTDIPDGINGY-VYAPDMSKIVYLKDVQLEPTVQDLHPDLPKAK 178

Query: 230 --------TYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRF-SS------------ 267
                        D +  Y      D  P + I   + ++   R+ S             
Sbjct: 179 ARIVDDQFYRHWNDWVDAYTHLFIADYVPAQPITTGKDIMEGERWESPVRPWGGVEQLAW 238

Query: 268 --NGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQI 316
             +GK+ + + +K            D+Y+ + ++  T  LT  +   + +   SP+   +
Sbjct: 239 TKDGKKLIYTCRKKIGIDYAESTNTDLYAYNTENGETVNLTEGMMGYDKNPVISPNGRYM 298

Query: 317 VFES-DREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            +ES +REG E    +LYVM     ++   S+  + +     W      I F        
Sbjct: 299 AWESMEREGYEADKIRLYVMDLTTGEKNDFSEGFDQNAEGLKWGDDNT-IWFISDWHATD 357

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETL 430
            I  +     +      D      +  P+G+ L+ + K      +++Y +D   G++E L
Sbjct: 358 EIYSLDIPTGRITK-HTDGVHNYTSVIPTGKMLL-ATKVSMSKPAEIYKVDPATGKDEEL 415



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 55/137 (40%), Gaps = 11/137 (8%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV------QKDEAMDIYS 286
           ++       +    D     +      I     S +G +A+  +      +     D+Y 
Sbjct: 26  NQKGYTPPAIKLSSDVMTPEVLWSFGRIGNVSVSPDGSKAVYDITYFNKEEDRGYSDLYL 85

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           ++L    T RLT+T +    A ++PD   I + +    K QL+ M  +GS+ ++++   +
Sbjct: 86  MNLPEGQTTRLTDTDYNESDAGWTPDGKFITYLA----KGQLWEMNPDGSNPRQVTDIPD 141

Query: 347 ASYFDPVWSPQGDLIAF 363
                 V++P    I +
Sbjct: 142 G-INGYVYAPDMSKIVY 157



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 82/273 (30%), Gaps = 66/273 (24%)

Query: 218 RFSPNQQK----VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+  K    + Y   +++       +    +    R+ +         ++ +GK   
Sbjct: 57  SVSPDGSKAVYDITYFNKEEDRGYSDLYLMNLPEGQTTRLTDTDYNESDAGWTPDGKFIT 116

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------------ 321
              +      ++ ++   +   ++T+         Y+PD S+IV+  D            
Sbjct: 117 YLAKG----QLWEMNPDGSNPRQVTDIPDGINGYVYAPDMSKIVYLKDVQLEPTVQDLHP 172

Query: 322 -------REGKEQLYVMQ------------SNGSDQKRISQDKE--------------AS 348
                  R   +Q Y               ++    + I+  K+                
Sbjct: 173 DLPKAKARIVDDQFYRHWNDWVDAYTHLFIADYVPAQPITTGKDIMEGERWESPVRPWGG 232

Query: 349 YFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVED--SNLQAPTWS 398
                W+  G  + +T                +     +  +   L E      + P  S
Sbjct: 233 VEQLAWTKDGKKLIYTCRKKIGIDYAESTNTDLYAYNTENGETVNLTEGMMGYDKNPVIS 292

Query: 399 PSGRSLIF-SRKKDGDTGSK--LYSIDLNGRNE 428
           P+GR + + S +++G    K  LY +DL    +
Sbjct: 293 PNGRYMAWESMEREGYEADKIRLYVMDLTTGEK 325



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 31/95 (32%), Gaps = 13/95 (13%)

Query: 345 KEASYFDPVWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-W 397
                 +   SP G    +       +       + +M     Q   L +    ++   W
Sbjct: 49  SFGRIGNVSVSPDGSKAVYDITYFNKEEDRGYSDLYLMNLPEGQTTRLTDTDYNESDAGW 108

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +P G+ + +  K       +L+ ++ +G N   + 
Sbjct: 109 TPDGKFITYLAK------GQLWEMNPDGSNPRQVT 137



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 8/143 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMIL 261
           LT         P  SPN + +A+ + + E    D +R+Y+MD            F     
Sbjct: 278 LTEGMMGYDKNPVISPNGRYMAWESMEREGYEADKIRLYVMDLTTGEKNDFSEGFDQNAE 337

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
             ++  +              +IYS+D+ +    + T+ +    S    P    ++    
Sbjct: 338 GLKW-GDDNTIWFISDWHATDEIYSLDIPTGRITKHTDGVHNYTS--VIPTGKMLLATKV 394

Query: 322 REGKE-QLYVMQSNGSDQKRISQ 343
              K  ++Y +       + +S 
Sbjct: 395 SMSKPAEIYKVDPATGKDEELSF 417


>gi|83815441|ref|YP_445444.1| dipeptidyl-peptidase [Salinibacter ruber DSM 13855]
 gi|83756835|gb|ABC44948.1| dipeptidyl-peptidase [Salinibacter ruber DSM 13855]
          Length = 821

 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 68/205 (33%), Gaps = 25/205 (12%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERL--------TNTLFINI---- 305
              P +S++G   ++ V+ D   D +   +D ++     L             I+     
Sbjct: 361 SYGPYWSADGDHGVLVVRADNNKDRWIARLDPETGDLTVLDRQHDTAWIGGPGISAYGGP 420

Query: 306 -SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL--IA 362
            +  + PD     F+S+  G   LY +     +  +++   +    D   S  G    + 
Sbjct: 421 GNVGWMPDGEHFYFQSEATGYSHLYTVDVETGETTQLTS-GDFEVLDARLSQDGSTWTLT 479

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             + S  +  +  M  DG     L + +       SP G  L  +     +  + LY  D
Sbjct: 480 TNRHSPHQQHVERMPADGGDITRLTQMTGTHDAVLSPDGTRLA-TLYSTTNQPADLYLKD 538

Query: 423 --LNGRNETLINTPAYASDPQWVGF 445
              +     +  +P      +W  +
Sbjct: 539 ATADADPVRITESPTD----EWAAY 559



 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 91/291 (31%), Gaps = 36/291 (12%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           D  D  Q+I     S  A  R+            +    GDF   +  +       +  +
Sbjct: 280 DAADPTQVIDYVTESGQADVRRA--------RPKVGIPPGDFALHVQDLKRDTTIAVNLH 331

Query: 192 SLCVMDRD--------GANIRYLTPSRDQILFEPRFSPNQQK-VAYATYDDEDILRVYLM 242
            L     D        GA +      R    + P +S +    V     D+     +  +
Sbjct: 332 QLPGA-YDVPAYRQEQGAELDSSEAKRALYSYGPYWSADGDHGVLVVRADNNKDRWIARL 390

Query: 243 DTRIDRAPKRIGNFRSMILA------------PRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           D              +  +               +  +G+      +      +Y+VD++
Sbjct: 391 DPETGDLTVLDRQHDTAWIGGPGISAYGGPGNVGWMPDGEHFYFQSEATGYSHLYTVDVE 450

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEAS 348
           +  T +LT+  F  + A  S D S     ++R    ++ +  M ++G D  R++Q     
Sbjct: 451 TGETTQLTSGDFEVLDARLSQDGSTWTLTTNRHSPHQQHVERMPADGGDITRLTQMTGT- 509

Query: 349 YFDPVWSPQGDLIA-FTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTW 397
             D V SP G  +A     + +   + +      +    + E    +   +
Sbjct: 510 -HDAVLSPDGTRLATLYSTTNQPADLYLKDATADADPVRITESPTDEWAAY 559



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 57/158 (36%), Gaps = 24/158 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNG------- 269
           R+  + Q + +      D     L    R   AP+++         P F  +G       
Sbjct: 67  RWHESGQALYFNWNPGGDFPSDSLYKVSRSGGAPQKVSPAERRSNPPTF--DGWHHGEHV 124

Query: 270 -----KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
                 R + +   D    +Y  + +++   RLT+T     +  +  +  +++FE D   
Sbjct: 125 YTDDFSRKVYAADGD----LYLYNRETDTQTRLTDTPAREGNPRFGLEEDRVLFERD--- 177

Query: 325 KEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLI 361
            + L+ +  +    ++++  +      +   SP+   +
Sbjct: 178 -DNLFSVHLSTGQIRQLTNVQSGREPQEGAPSPRERFL 214



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 53/154 (34%), Gaps = 17/154 (11%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASY--FDP 352
           T       +A +      + F  +  G    + LY +  +G   +++S  +  S      
Sbjct: 57  TWIGDWPTNARWHESGQALYFNWNPGGDFPSDSLYKVSRSGGAPQKVSPAERRSNPPTFD 116

Query: 353 VWSPQGDLIAFTKFSGEKF----AIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFS 407
            W   G+ +    FS + +     + +  ++   +  L +    +  P +      ++F 
Sbjct: 117 GWH-HGEHVYTDDFSRKVYAADGDLYLYNRETDTQTRLTDTPAREGNPRFGLEEDRVLFE 175

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R  +      L+S+ L+      +       +PQ
Sbjct: 176 RDDN------LFSVHLSTGQIRQLTNVQSGREPQ 203


>gi|18312539|ref|NP_559206.1| tricorn protease [Pyrobaculum aerophilum str. IM2]
 gi|18160005|gb|AAL63388.1| tricorn protease [Pyrobaculum aerophilum str. IM2]
          Length = 1016

 Score = 80.4 bits (197), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 66/193 (34%), Gaps = 28/193 (14%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---- 320
            +  G   +   + D               +RLT+   + +   +SPD   I F      
Sbjct: 8   PDIYGDEIIFVTEDDLWKY------AKGIGQRLTSDFGVVLKPKFSPDGKWIAFTRLQQT 61

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMK 377
           D+     +YV+ S G + KRI+           W+P G ++ ++ F     +   +  + 
Sbjct: 62  DQGTTADVYVVPSEGGEPKRITYFGTPFTRVVGWTPDGRVLVYSDFKTPFPQWRELYAIS 121

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI----------FSRKKDGDTGSKLYSIDLNGRN 427
            DG  ERL +  +          G  ++          + R K G  G    S D     
Sbjct: 122 LDGIYERLNLGPATALVY---GDGGIVVLGRNTYDLPYWKRYKGGARGVLWISRDGGRTF 178

Query: 428 ETLINTPAYASDP 440
           E  ++ P   + P
Sbjct: 179 EKFLDLPGNITSP 191



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 23/200 (11%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALIS----VQKDEAMDIYSVDLQSNATERLTNTLFI 303
              +R+ +   ++L P+FS +GK    +      +    D+Y V  +    +R+T     
Sbjct: 29  GIGQRLTSDFGVVLKPKFSPDGKWIAFTRLQQTDQGTTADVYVVPSEGGEPKRITYFGTP 88

Query: 304 NISAS-YSPDSSQIVFESDREGKEQ---LYVMQSNG-------SDQKRISQDKEASYFDP 352
                 ++PD   +V+   +    Q   LY +  +G            +           
Sbjct: 89  FTRVVGWTPDGRVLVYSDFKTPFPQWRELYAISLDGIYERLNLGPATALVYGDGGIVVLG 148

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
             +    L  + ++ G    +  + +DG +  E+ L    N+ +P     G  + F    
Sbjct: 149 RNTYD--LPYWKRYKGGARGVLWISRDGGRTFEKFLDLPGNITSPMIV--GGRVYFLSDH 204

Query: 411 DGDTGSKLYSIDLNGRNETL 430
           +G     LYS+D +GR+   
Sbjct: 205 EG--VGNLYSVDFSGRDMRR 222



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 79/191 (41%), Gaps = 16/191 (8%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + +++   +     ++  +      + A  +IG+    +     S++G++  ++   D A
Sbjct: 291 SGERIVLVSRGQAFVMPSW------EGAVIQIGHRGGGVRYKHISTDGEKVAVAT-YDGA 343

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           +++Y  +L+    +R+     I +  + +   S+I   + R    +L+V+  +  + +  
Sbjct: 344 VEVY--NLEGVLVKRI--EPGIGLIEALALKQSKIAAANHRG---ELWVIDIDTGNVQMA 396

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQER-LLVEDSNLQAPTWSP 399
            + +       VW P G  +A+ K SG     I +      +   +    +   +P + P
Sbjct: 397 DKSEYGLITGIVWHPAGRWLAYAKPSGIYTQNIRIYDAATGKIYDVTSPTAYDYSPAFDP 456

Query: 400 SGRSLIFSRKK 410
            GR L F  ++
Sbjct: 457 EGRYLYFLSRR 467



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 75/232 (32%), Gaps = 28/232 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRS-MILA 262
             S   ++ +P+FSP+ + +A+      D      VY++ +     PKRI  F +     
Sbjct: 34  LTSDFGVVLKPKFSPDGKWIAFTRLQQTDQGTTADVYVVPSE-GGEPKRITYFGTPFTRV 92

Query: 263 PRFSSNGKRALISVQKDEAMD---IYSVDLQSNATERLTNTLFINISASYSPDS------ 313
             ++ +G+  + S  K        +Y++ L     ERL   L    +  Y          
Sbjct: 93  VGWTPDGRVLVYSDFKTPFPQWRELYAISLD-GIYERL--NLGPATALVYGDGGIVVLGR 149

Query: 314 ---SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
                  ++  + G   +  +  +G        D   +   P+    G  + F       
Sbjct: 150 NTYDLPYWKRYKGGARGVLWISRDGGRTFEKFLDLPGNITSPMIV--GGRVYFLSDHEGV 207

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +  +   G   R      +  A   +  G+ ++F           ++  D
Sbjct: 208 GNLYSVDFSGRDMRRHTNFKDYYARNANSDGKRIVF------QAAGDIWLYD 253



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 69/224 (30%), Gaps = 28/224 (12%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I F             + V+  +G   + +T           ++P+ + + Y+ +     
Sbjct: 53  IAFTRLQQTDQGTTADVYVVPSEGGEPKRITYFGTPFTRVVGWTPDGRVLVYSDFKTPFP 112

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFS---SNGKRALISVQ----------KDEAMD 283
               L    +D   +R+       L P  +    +G   ++             K  A  
Sbjct: 113 QWRELYAISLDGIYERL------NLGPATALVYGDGGIVVLGRNTYDLPYWKRYKGGARG 166

Query: 284 IYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +  +      T E+  +      S        ++ F SD EG   LY +  +G D +R +
Sbjct: 167 VLWISRDGGRTFEKFLDLPGNITSPMIV--GGRVYFLSDHEGVGNLYSVDFSGRDMRRHT 224

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             K+  Y+    +  G  I F         I +      +   L
Sbjct: 225 NFKD--YYARNANSDGKRIVFQAAGD----IWLYDPATERLEKL 262



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 119/385 (30%), Gaps = 87/385 (22%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG----DFNSRILFVSES----- 183
             D + ++   F +    WR++     D IY+ +           +  I+ +  +     
Sbjct: 96  TPDGRVLVYSDFKTPFPQWRELYAISLDGIYERLNLGPATALVYGDGGIVVLGRNTYDLP 155

Query: 184 ---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 G  +  L +  RDG             +  P       +V + + D E +  +Y
Sbjct: 156 YWKRYKGGARGVLWIS-RDGGRTFEKFLDLPGNITSPMIV--GGRVYFLS-DHEGVGNLY 211

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +D    R  +R  NF+        S +GKR +     D    I+  D  +   E+L   
Sbjct: 212 SVD-FSGRDMRRHTNFKDYYARNANS-DGKRIVFQAAGD----IWLYDPATERLEKLEID 265

Query: 301 LFINISASYS--------------PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           L ++  A  +                  +IV  S    + Q +VM S      +I     
Sbjct: 266 LPLSRKAKMAKFVDPVKYLEYFALASGERIVLVS----RGQAFVMPSWEGAVIQIGHRG- 320

Query: 347 ASYFDPVWSPQGDLIAFTKFSG------------------------------------EK 370
                   S  G+ +A   + G                                     +
Sbjct: 321 GGVRYKHISTDGEKVAVATYDGAVEVYNLEGVLVKRIEPGIGLIEALALKQSKIAAANHR 380

Query: 371 FAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRN 427
             + V+  D    ++  +     +    W P+GR L ++ K  G     +   D   G+ 
Sbjct: 381 GELWVIDIDTGNVQMADKSEYGLITGIVWHPAGRWLAYA-KPSGIYTQNIRIYDAATGKI 439

Query: 428 ETLIN------TPAYASDPQWVGFM 446
             + +      +PA+  + +++ F+
Sbjct: 440 YDVTSPTAYDYSPAFDPEGRYLYFL 464



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 46/143 (32%), Gaps = 11/143 (7%)

Query: 193 LCVMDRDGANIRY------LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           + V   DGA   Y      +      I      +  Q K+A A +  E    ++++D   
Sbjct: 335 VAVATYDGAVEVYNLEGVLVKRIEPGIGLIEALALKQSKIAAANHRGE----LWVIDIDT 390

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINI 305
                   +   +I    +   G+    +        +I   D  +     +T+    + 
Sbjct: 391 GNVQMADKSEYGLITGIVWHPAGRWLAYAKPSGIYTQNIRIYDAATGKIYDVTSPTAYDY 450

Query: 306 SASYSPDSSQIVFESDREGKEQL 328
           S ++ P+   + F S R     L
Sbjct: 451 SPAFDPEGRYLYFLSRRALNPAL 473



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 90/283 (31%), Gaps = 44/283 (15%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +      + +   +  L V+D D  N++    S   ++    + P  + +AYA       
Sbjct: 367 LALKQSKIAAANHRGELWVIDIDTGNVQMADKSEYGLITGIVWHPAGRWLAYA-----KP 421

Query: 237 LRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRALISVQKDEAMDI----YSVD 288
             +Y  + RI  A       + +  +   +P F   G+      ++     +    +S  
Sbjct: 422 SGIYTQNIRIYDAATGKIYDVTSPTAYDYSPAFDPEGRYLYFLSRRALNPALDPVQFSYI 481

Query: 289 LQSNATERLTNTLFINISASYS-PDSSQIVFESDREG----------KEQLY--VMQSNG 335
              ++   L      + S       +     E D EG          +E LY  V+   G
Sbjct: 482 FAKHSKPYLAVLRRGDTSPFVQYKKADVKAEEVDLEGIETRVEPFPVEEGLYASVVGLKG 541

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                +  D E +    +WS Q    A          + +   +      LV  ++    
Sbjct: 542 GKVAWLKYDVEGALRYYLWSAQERRGA----------VEIYDLETKTRDQLVAGASSLRA 591

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             SP G+ L+          ++L  ID+  + +     P   S
Sbjct: 592 --SPDGKYLLV------KEENRLRLIDVEKKPDLQSRDPGRKS 626


>gi|70986548|ref|XP_748765.1| NACHT and WD40 domain protein [Aspergillus fumigatus Af293]
 gi|66846395|gb|EAL86727.1| NACHT and WD40 domain protein [Aspergillus fumigatus Af293]
          Length = 1272

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 85/235 (36%), Gaps = 26/235 (11%)

Query: 204  RYLTPSRDQILFEP--------RFSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRI 253
            R++      I   P         FSP    V   +       +  +  +        + +
Sbjct: 851  RFVLKHAQMINMAPLQVYCSGLAFSPTDSIVRRIFNNKQPSWLPVLPQVHKSWSAELQTL 910

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPD 312
                S + +  FS +G+R + S   D  + ++  D Q+ +  +       ++ S ++SPD
Sbjct: 911  EGHSSWVSSVAFSPDGQRIV-SGSDDNTIKLW--DAQTGSELQSLQGHSDSVHSVAFSPD 967

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +IV  SD      + +  +    + R  +      +   +S  G  I           
Sbjct: 968  GQRIVSGSD---DNTIKLWDAQTGSELRSLEGHSRPVYSVAFSLDGQRIVSGSDDNT--- 1021

Query: 373  IGVMKK-DGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKK----DGDTGSKLYSI 421
            I +     GS+ R L   S+   +  +SP G+ ++    K    D  TGS+L S+
Sbjct: 1022 IKLWDAQTGSELRSLEGHSDWVHSVAFSPDGQRIVIYGSKIRLWDAQTGSELQSL 1076



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 63/190 (33%), Gaps = 38/190 (20%)

Query: 113  TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
               V      +  V        +LWD +   ++   +            H  SD ++   
Sbjct: 917  VSSVAFSPDGQRIVSGSDDNTIKLWDAQTGSELQSLQ-----------GH--SDSVHSVA 963

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                G          + +VSG   N++ + D    +         + ++   FS + Q++
Sbjct: 964  FSPDG----------QRIVSGSDDNTIKLWDAQTGSELRSLEGHSRPVYSVAFSLDGQRI 1013

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
               + D+     + L D +     + +      + +  FS +G+R +I   K     I  
Sbjct: 1014 VSGSDDN----TIKLWDAQTGSELRSLEGHSDWVHSVAFSPDGQRIVIYGSK-----IRL 1064

Query: 287  VDLQSNATER 296
             D Q+ +  +
Sbjct: 1065 WDAQTGSELQ 1074


>gi|322437538|ref|YP_004219628.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX9]
 gi|321165431|gb|ADW71134.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX9]
          Length = 501

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 49/263 (18%), Positives = 89/263 (33%), Gaps = 34/263 (12%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDE------------DILRVYLMDTRIDRAP--- 250
           L  S  +    P  S ++++ A  +  +              +  +Y     +   P   
Sbjct: 157 LPTSEVETALLPAVSMDKRRAARWSVRERVLGAAAAILLLALLTTLYYWHRPLHPQPLRI 216

Query: 251 KRIGNFRSMILAP-------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-- 301
           ++I +F  +   P         +++G R L SV  D    + ++ + +    +L      
Sbjct: 217 EQISHFIPIFSGPPNAESFLTLATDGDRILTSVSVDGRPRLSAIYISTGEVHKLATPKEL 276

Query: 302 FINISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             N     S D S+++  S    E ++ L+V  S G    RI         D  W P G 
Sbjct: 277 SSNSLEDISKDGSKLLLRSQLSSESEQPLWVTPSAGGSGLRI---GNVLAQDATWMPDGV 333

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            I +   +     +  ++ DG   +L            WSP GR L F+        + L
Sbjct: 334 SILYANGND----LYTVQADGGSSKLYATLQGRAFWMRWSPDGRLLRFTLVDPVTHSTNL 389

Query: 419 YSIDLNGRNETLINTPAYASDPQ 441
           Y ++   R    +  P     P 
Sbjct: 390 YELEAGSRTARPVRLPGLTPQPA 412



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 63/188 (33%), Gaps = 19/188 (10%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            S +S   +  L V    G +   +    + +  +  + P+   + YA     +   +Y 
Sbjct: 294 RSQLSSESEQPLWVTPSAGGSGLRI---GNVLAQDATWMPDGVSILYA-----NGNDLYT 345

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
           +      + K     +      R+S +G+    ++           +L++ +   R    
Sbjct: 346 VQAD-GGSSKLYATLQGRAFWMRWSPDGRLLRFTLVDPVTHSTNLYELEAGSRTARPVRL 404

Query: 301 LFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWS 355
             +        +++ D    VFE+     E L+ ++        I   +    +F PV +
Sbjct: 405 PGLTPQPACCGTWTADGGAYVFEA----SENLWELEGEYHSPTLIQLTNGPLRFFSPVAA 460

Query: 356 PQGDLIAF 363
             G  I F
Sbjct: 461 RSGFRIFF 468



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 56/175 (32%), Gaps = 19/175 (10%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N L  +  DG + + L  +     F  R+SP+ + + +   D        L +       
Sbjct: 341 NDLYTVQADGGSSK-LYATLQGRAFWMRWSPDGRLLRFTLVD-PVTHSTNLYELEAGSRT 398

Query: 251 KRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R      +   P     ++++G       +  E +     +  S    +LTN       
Sbjct: 399 ARPVRLPGLTPQPACCGTWTADGG--AYVFEASENLWELEGEYHSPTLIQLTNGPLR--- 453

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +SP        + R G    ++     S  ++ S+ +      P +    + +
Sbjct: 454 -FFSP-------VAARSGFRIFFLGLEPTSGLQQFSEARHEFQPAPAFLADANRL 500


>gi|294665760|ref|ZP_06731032.1| dipeptidyl peptidase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
 gi|292604455|gb|EFF47834.1| dipeptidyl peptidase [Xanthomonas fuscans subsp. aurantifolii str.
           ICPB 10535]
          Length = 789

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 87/214 (40%), Gaps = 17/214 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-----RLT 298
            + +RA +   +      A  +S +G+   + ++  +  D +   +  +        RL+
Sbjct: 322 LKGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVGLDNARLQPRHRLS 381

Query: 299 NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++ +IN   +   + PD+  +   S+  G  QLY ++ +G  ++R     +     PV S
Sbjct: 382 DSAWINWDFNDFGWLPDNRTLWLLSEESGYSQLYTVEGDGKPRQR--TRGKWEVSMPVPS 439

Query: 356 PQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  + F         + +  +     Q   +   + ++  + SP+G+ L+  R     
Sbjct: 440 ADGSGMFFLCNQKWPGDYEVCKLDLRNDQLTEITALNGVEGYSLSPNGQQLL-VRYSGSY 498

Query: 414 TGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
             ++L  +   G   T++    TPA+ + P W+ 
Sbjct: 499 LPTQLAVVPAAGGQATVLTDTRTPAFKAQP-WIA 531



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 16/142 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--S 258
           A+  ++ PS DQ      +  + ++V Y    D   +R            +R+ +     
Sbjct: 31  ADPDWIGPSVDQA----WWQWDGKQVQYLLKRDGSPVRDTYRQGTGGGTAERVADTARAG 86

Query: 259 MILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +  A P + +  +R L +   D    I+  DL++ A  +LT +  I     ++ D   I 
Sbjct: 87  LDAANPSYDATRQRMLFARNGD----IFLRDLRTGALTQLTRSNEIESRPQFASDGGAIW 142

Query: 318 FESDREGKEQLYVMQSNGSDQK 339
               R G    Y  +++G   +
Sbjct: 143 ----RAGNN-WYHWRADGGTAQ 159



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 50/139 (35%), Gaps = 7/139 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +   + +        L     D  P++    +  +  P  S++G        +
Sbjct: 395 WLPDNRTLWLLSEESG---YSQLYTVEGDGKPRQRTRGKWEVSMPVPSADGSGMFFLCNQ 451

Query: 279 --DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNG 335
                 ++  +DL+++    +T    +    S SP+  Q++          QL V+ + G
Sbjct: 452 KWPGDYEVCKLDLRNDQLTEITALNGVEGY-SLSPNGQQLLVRYSGSYLPTQLAVVPAAG 510

Query: 336 SDQKRISQDKEASYFDPVW 354
                ++  +  ++    W
Sbjct: 511 GQATVLTDTRTPAFKAQPW 529


>gi|71274471|ref|ZP_00650759.1| Peptidase S9, prolyl oligopeptidase active site region [Xylella
           fastidiosa Dixon]
 gi|71898304|ref|ZP_00680477.1| alanyl dipeptidyl peptidase [Xylella fastidiosa Ann-1]
 gi|170730572|ref|YP_001776005.1| alanyl dipeptidyl peptidase [Xylella fastidiosa M12]
 gi|71164203|gb|EAO13917.1| Peptidase S9, prolyl oligopeptidase active site region [Xylella
           fastidiosa Dixon]
 gi|71731827|gb|EAO33885.1| alanyl dipeptidyl peptidase [Xylella fastidiosa Ann-1]
 gi|167965365|gb|ACA12375.1| alanyl dipeptidyl peptidase [Xylella fastidiosa M12]
          Length = 717

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 53/259 (20%), Positives = 87/259 (33%), Gaps = 39/259 (15%)

Query: 214 LFEPRFSPNQQKVAYA--TYDDEDI-----LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   + +A    D ++I     + V  +      AP R+      + AP FS
Sbjct: 64  VSSPELSPDGAVLVFAKRQMDAKNIKASTSVWVKWLQAGAPAAPVRLTPLGWDVSAPVFS 123

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y + +      +LTN      S   SP   ++VF +      
Sbjct: 124 RDGKAVYFLSAKSGSNQLYVLPVSGGTPRQLTNLAVDIDSYKLSPQGDRVVFSAS---VF 180

Query: 327 QLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDL----IAFTKFSGEKFA 372
           Q+     +           S    +  ++        W+  G      IA     G K  
Sbjct: 181 QVCGSDLSCTKRKLDEKKNSKASGVVFEQLFVRHWDTWN-DGRRNTLFIASLPRGGAKPV 239

Query: 373 IGVMK----KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDL 423
             V       DG                WSP G S++ S +  G      T   LY  D+
Sbjct: 240 SAVSAMSAMLDGDVPSKPF--GGADHFVWSPDGHSVVASIRVAGRQEPWSTNFDLYRFDV 297

Query: 424 NGRNETLINTPAYASDPQW 442
           +G +  +  T   A++P W
Sbjct: 298 SGHDAPVNLT---AANPAW 313



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 58/175 (33%), Gaps = 11/175 (6%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQ 223
                D +S +  +  +           L   D  G +    LT +       P FS + 
Sbjct: 264 FVWSPDGHSVVASIRVAGRQEPWSTNFDLYRFDVSGHDAPVNLTAANPAWDATPMFSADG 323

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + + Y          D   +  M+ +  +  +   ++         S++GK   ++    
Sbjct: 324 KMLYYRAMRRPGFEADRFGLMEMEVQSGKVREIAPHWDRSADEIALSADGKALYVNADDH 383

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQS 333
               ++ VD+ S   E+      ++     +    ++ F  +  +  +Q++V  +
Sbjct: 384 GEHPLFKVDIVSGKVEKWVGEGSVHA-PVLA--GGKLAFARNSLKSADQIFVTDA 435


>gi|332185818|ref|ZP_08387565.1| dipeptidyl peptidase IV (DPP IV) [Sphingomonas sp. S17]
 gi|332014176|gb|EGI56234.1| dipeptidyl peptidase IV (DPP IV) [Sphingomonas sp. S17]
          Length = 751

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 85/253 (33%), Gaps = 61/253 (24%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           ++ R   RIG  + ++ A  ++ +GK  L+ +  D    +Y   L      RLTNT    
Sbjct: 110 KMQRERARIGGSKGIV-AYDWAPDGKSILVPLDGD----LYLAGLDG-QVRRLTNTPGGE 163

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---------------- 348
           ++   SP    + F  D    + L+ M   G + + ++++   +                
Sbjct: 164 LNPIVSPKGGYVSFVRD----QNLWAMPLAGGEARALTKEGGGTVHFGEAEFVAQEEMHR 219

Query: 349 YFDPVWSPQGDLIAFTKFSGEK------------------------------FAIGVMKK 378
           +    WSP    IA  +F                                    + VMK 
Sbjct: 220 FTGYWWSPDERYIAVERFDDAPVKVAVRAAIGAAGTKVYEQRYPAAGTPNALVDLYVMKA 279

Query: 379 DGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           DGS    +   SN         W+P G +++  R+        +  +D      TL+ T 
Sbjct: 280 DGSGRVKVDLGSNPDIYLARVDWTPDGSAMLVQRESRDQKTLDMLRVDPKTGKSTLLFTE 339

Query: 435 AYASDPQWVGFMD 447
             + D  W+   D
Sbjct: 340 -RSGDRSWLNLSD 351



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 115/348 (33%), Gaps = 67/348 (19%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-- 217
           D   + +T   G   + I+      VS +   +L  M   G   R LT      +     
Sbjct: 150 DGQVRRLTNTPGGELNPIVSPKGGYVSFVRDQNLWAMPLAGGEARALTKEGGGTVHFGEA 209

Query: 218 --------------RFSPNQQKVAYATYDDEDI--------------------------- 236
                          +SP+++ +A   +DD  +                           
Sbjct: 210 EFVAQEEMHRFTGYWWSPDERYIAVERFDDAPVKVAVRAAIGAAGTKVYEQRYPAAGTPN 269

Query: 237 --LRVYLMDTRIDRAPKR-IGNFRSMILA-PRFSSNGKRALISV-QKDE-AMDIYSVDLQ 290
             + +Y+M        K  +G+   + LA   ++ +G   L+    +D+  +D+  VD +
Sbjct: 270 ALVDLYVMKADGSGRVKVDLGSNPDIYLARVDWTPDGSAMLVQRESRDQKTLDMLRVDPK 329

Query: 291 SNATERLTNTLFINISA-----SYSP--DSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +  +  L      + S      +Y P  D S +++ S+R+G   LY          ++++
Sbjct: 330 TGKSTLLFTERSGDRSWLNLSDAYRPMKDGS-LIWRSERDGYGHLYRF--ADGQWTQLTK 386

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQAPTW-SP 399
                            + FT    +     +   D +Q      L E     + +  S 
Sbjct: 387 GPWVVTGLVGVDEAKGRLYFTGLKDDVLEQHLYAVDIAQPNVITRLTERGYTNSASMDSS 446

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVGFM 446
           + R ++   +      +++Y  D  G+    IN  A  A  P +  ++
Sbjct: 447 ASRFIV--SRSSPTQPTQIYLADTTGKRLNWINENAIVAGHP-YAPYL 491


>gi|186682047|ref|YP_001865243.1| protein kinase [Nostoc punctiforme PCC 73102]
 gi|186464499|gb|ACC80300.1| protein kinase [Nostoc punctiforme PCC 73102]
          Length = 687

 Score = 80.1 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 93/266 (34%), Gaps = 19/266 (7%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           +I+         +       S+++ SG    ++ + + +   +          +    FS
Sbjct: 431 EIHTLEGHSNWIWTVAFSPDSKTLASGSADKTIKLWNVETGKLVRTLEGNTDGVTSVAFS 490

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + +A  +      +R+ L + +  +  + +      + +  FS +GK    S   D+
Sbjct: 491 PDGKTLA--SGTASKDIRIKLWNVKTGKLIRTLEGHTDGVPSVAFSPDGKTLA-SGSWDK 547

Query: 281 AMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + ++  +L +    R       +I S +++PD   +   S     + + +   N   + 
Sbjct: 548 TIKLW--NLNTGKEIRTLKGNAESILSVAFAPDGVTLASGSK---DKTIKLWNLNTGKEI 602

Query: 340 RISQDKEASYFDPVWSPQGD---LIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAP 395
           R  +  +       + P G    L   +  S +   +      G + R L      + A 
Sbjct: 603 RTLKGHKDKVNSVAFLPSGTQNGLTLVSGSSDKTIKLW-NPLTGKEIRTLDTGSGYIYAI 661

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSI 421
             SP G ++       G +G  +  I
Sbjct: 662 AISPDGETIA-----GGGSGENILKI 682



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 47/308 (15%), Positives = 101/308 (32%), Gaps = 32/308 (10%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEK----------GDFNSRILFVSESVVSGI 188
           ++   F S+P + R  +  +++ +   +                F +R   +SE   S  
Sbjct: 314 VLTSTFASTPGNKRPFSLRLNNTLKSQLLLISSISVLGLAGVWYFQTRPHTMSEYSPSNS 373

Query: 189 IKNSLCVM---DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
              SL +      D     +   S D       FSP+   +  A+ D      + L +  
Sbjct: 374 PPTSLPISLPSKSDFLPKAFKGHSSDVNSV--AFSPDGTTLGSASDDK----TIKLWNLA 427

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                  +    + I    FS + K    S   D+ + ++  ++++    R L       
Sbjct: 428 RGEEIHTLEGHSNWIWTVAFSPDSKTLA-SGSADKTIKLW--NVETGKLVRTLEGNTDGV 484

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPD   +          ++ +         R  +          +SP G  +A  
Sbjct: 485 TSVAFSPDGKTLA-SGTASKDIRIKLWNVKTGKLIRTLEGHTDGVPSVAFSPDGKTLASG 543

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +      I +   +  +E   ++ +     +  ++P G +L        D   KL++++
Sbjct: 544 SWDKT---IKLWNLNTGKEIRTLKGNAESILSVAFAPDGVTLA---SGSKDKTIKLWNLN 597

Query: 423 LNGRNETL 430
                 TL
Sbjct: 598 TGKEIRTL 605



 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 91/260 (35%), Gaps = 20/260 (7%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ S     ++ + +       +        ++   FSP+ + +A  + D      + L 
Sbjct: 411 TLGSASDDKTIKLWNLARGEEIHTLEGHSNWIWTVAFSPDSKTLASGSADK----TIKLW 466

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTL 301
           +    +  + +      + +  FS +GK     +  KD  + ++  ++++    R T   
Sbjct: 467 NVETGKLVRTLEGNTDGVTSVAFSPDGKTLASGTASKDIRIKLW--NVKTGKLIR-TLEG 523

Query: 302 FINISAS--YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             +   S  +SPD   +   S     + + +   N   + R  +    S     ++P G 
Sbjct: 524 HTDGVPSVAFSPDGKTLASGS---WDKTIKLWNLNTGKEIRTLKGNAESILSVAFAPDGV 580

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRS-LIFSRKKDGDTGS 416
            +A          I +   +  +E   ++       +  + PSG    +       D   
Sbjct: 581 TLASGSKDKT---IKLWNLNTGKEIRTLKGHKDKVNSVAFLPSGTQNGLTLVSGSSDKTI 637

Query: 417 KLYSIDLNGRNETLINTPAY 436
           KL++  L G+    ++T + 
Sbjct: 638 KLWN-PLTGKEIRTLDTGSG 656



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 82/260 (31%), Gaps = 30/260 (11%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       +LW+V+  K +  +    +      +A                 F+  
Sbjct: 452 KTLASGSADKTIKLWNVETGKLV--RTLEGNTDGVTSVA-----------------FSPD 492

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
              ++    S  I+  L  +   G  IR L    D +     FSP+ + +A  ++D    
Sbjct: 493 GKTLASGTASKDIRIKLWNVK-TGKLIRTLEGHTDGVPSV-AFSPDGKTLASGSWDK--- 547

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L +    +  + +      IL+  F+ +G     S  KD+ + +++++        
Sbjct: 548 -TIKLWNLNTGKEIRTLKGNAESILSVAFAPDGVTLA-SGSKDKTIKLWNLN-TGKEIRT 604

Query: 297 LTNTLFINISASYSPDSSQ--IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           L        S ++ P  +Q  +   S    K  + +       + R         +    
Sbjct: 605 LKGHKDKVNSVAFLPSGTQNGLTLVSGSSDKT-IKLWNPLTGKEIRTLDTGSGYIYAIAI 663

Query: 355 SPQGDLIAFTKFSGEKFAIG 374
           SP G+ IA          I 
Sbjct: 664 SPDGETIAGGGSGENILKIW 683



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 52/183 (28%), Gaps = 27/183 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD------------ 161
           G+ +  G     +  +LW+VK  K I  +           +A   S D            
Sbjct: 493 GKTLASGTASKDIRIKLWNVKTGKLI--RTLEGHTDGVPSVA--FSPDGKTLASGSWDKT 548

Query: 162 -------IYQSITGEKGDFNS--RILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSR 210
                    + I   KG+  S   + F  + V   SG    ++ + + +           
Sbjct: 549 IKLWNLNTGKEIRTLKGNAESILSVAFAPDGVTLASGSKDKTIKLWNLNTGKEIRTLKGH 608

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
              +    F P+  +             + L +    +  + +      I A   S +G+
Sbjct: 609 KDKVNSVAFLPSGTQNGLTLVSGSSDKTIKLWNPLTGKEIRTLDTGSGYIYAIAISPDGE 668

Query: 271 RAL 273
              
Sbjct: 669 TIA 671


>gi|281410829|gb|ADA68827.1| NWD1 [Podospora anserina]
          Length = 420

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 87/256 (33%), Gaps = 21/256 (8%)

Query: 170 KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G +   ++F +  + + SG    ++ + D               ++    FS + Q++A
Sbjct: 172 HGGWVMSVVFSADGQRLASGSDDRTVKIWDAATGACVQTLEGHGGLVSSVVFSADGQRLA 231

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D      V + D       + +     ++++  FS++G+R   S   D+ + I+  
Sbjct: 232 SGSDDR----TVKIWDAATGACVQTLEGHGGLVMSVVFSADGQRLA-SGSGDKTVKIW-- 284

Query: 288 DLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D  + A  + L        S  +S D  ++   S     + + +  +      +  +   
Sbjct: 285 DAATGACVQTLEGHGGWVRSVVFSADGQRLASGSH---DKTVKIWDAATGACVQTLEGHG 341

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSL 404
                 V+S  G  +A          + +           +E     + +  +S  G+ L
Sbjct: 342 GWVRSVVFSADGQRLA---SGSGDETVKIWDAATGACVQTLEGHGGWVMSVVFSADGQRL 398

Query: 405 IFSRKKDGDTGSKLYS 420
                  GD   K++ 
Sbjct: 399 A---SGSGDETVKIWD 411



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 16/227 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG    ++ + D                +    FS + Q++A  + D      V +
Sbjct: 18  QRLASGSDDRTVKIWDAATGACVQTLEGHGGWVSSVVFSADGQRLASGSDDR----TVKI 73

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
            D       + +     ++++  FS++G+R   S   D  + I+  D  + A  + L   
Sbjct: 74  WDAATGACVQTLEGHGGLVMSVVFSADGQRLA-SGSDDRTVKIW--DAATGACVQTLEGH 130

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             +  S  +S D  ++   SD      + +  +      +  +         V+S  G  
Sbjct: 131 GGLVSSVVFSADGQRLASGSD---DRTVKIWDAATGACVQTLEGHGGWVMSVVFSADGQR 187

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
           +A +        I             +E     + +  +S  G+ L 
Sbjct: 188 LA-SGSDDRTVKIW--DAATGACVQTLEGHGGLVSSVVFSADGQRLA 231



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 58/188 (30%), Gaps = 15/188 (7%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSP 311
           +      + +  FS++G+R   S   D  + I+  D  + A  + L        S  +S 
Sbjct: 1   LEGHGGSVRSVVFSADGQRLA-SGSDDRTVKIW--DAATGACVQTLEGHGGWVSSVVFSA 57

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D  ++   SD      + +  +      +  +         V+S  G  +A +       
Sbjct: 58  DGQRLASGSD---DRTVKIWDAATGACVQTLEGHGGLVMSVVFSADGQRLA-SGSDDRTV 113

Query: 372 AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            I             +E     + +  +S  G+ L        D   K++        +T
Sbjct: 114 KIW--DAATGACVQTLEGHGGLVSSVVFSADGQRLASGSD---DRTVKIWDAATGACVQT 168

Query: 430 LINTPAYA 437
           L     + 
Sbjct: 169 LEGHGGWV 176


>gi|271968428|ref|YP_003342624.1| hypothetical protein Sros_7190 [Streptosporangium roseum DSM 43021]
 gi|270511603|gb|ACZ89881.1| WD40 repeat-domain-containing protein-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 675

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 111/294 (37%), Gaps = 30/294 (10%)

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
              D   V  RLWDV   + ++G       +    +A +    I   +     D   R+ 
Sbjct: 404 AADDGYTV--RLWDVAT-RALLGTPLTGHTSWVSAVAFSPDGKI---LASGSYDDTVRLW 457

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
            V+ +   G            G N      +    +    FSP+ + +A    DD+D +R
Sbjct: 458 DVATNTPIGRPLA--------GRN------NPTGAVSAVAFSPDGKILA---TDDDDAVR 500

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++ + TR     + +  +   + +  FS +GK  +++   D+A+ ++ V  ++     LT
Sbjct: 501 LWDVVTRT-PVGRPLTGYTDSLQSVAFSPDGK--ILATDDDDAVRLWDVVTRTAIGRPLT 557

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  + ++SPD   +      +   +L+ + +     + ++   + S     +SP G
Sbjct: 558 GHTSWIAAVAFSPDGKILA-TGSTDDTVRLWDVATRTPVGRPLTGHTD-SLQSVAFSPDG 615

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
            ++A T    E   +  +       R L     +LQ+  +SP G+ L       
Sbjct: 616 KILA-TGSDDETVRLWDVATRTPVGRPLTGHTDSLQSVAFSPDGKILATGSDDG 668



 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/260 (19%), Positives = 100/260 (38%), Gaps = 10/260 (3%)

Query: 164 QSITGEKGDFNSRILF-VSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSP 221
           Q +TG  G   S + F     +++     ++ + D    A +          +    FSP
Sbjct: 381 QPLTGHTGVAVSAVAFSPDGKILAADDGYTVRLWDVATRALLGTPLTGHTSWVSAVAFSP 440

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +A  +YDD   L     +T I R      N    + A  FS +GK  +++   D+A
Sbjct: 441 DGKILASGSYDDTVRLWDVATNTPIGRPLAGRNNPTGAVSAVAFSPDGK--ILATDDDDA 498

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + ++ V  ++     LT       S ++SPD   +   +D +   +L+ + +  +  + +
Sbjct: 499 VRLWDVVTRTPVGRPLTGYTDSLQSVAFSPDGKILA--TDDDDAVRLWDVVTRTAIGRPL 556

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           +           +SP G ++A            V  +      L     +LQ+  +SP G
Sbjct: 557 TGHTSW-IAAVAFSPDGKILATGSTDDTVRLWDVATRTPVGRPLTGHTDSLQSVAFSPDG 615

Query: 402 RSLIFSRKKDGDTGSKLYSI 421
           + L        D   +L+ +
Sbjct: 616 KILATGSD---DETVRLWDV 632


>gi|223934546|ref|ZP_03626467.1| hypothetical protein Cflav_PD6084 [bacterium Ellin514]
 gi|223897009|gb|EEF63449.1| hypothetical protein Cflav_PD6084 [bacterium Ellin514]
          Length = 1049

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 68/211 (32%), Gaps = 29/211 (13%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ +   + T+     + V+      +          + +     S +G     S     
Sbjct: 698 PDGR---FVTFGAGSTVLVWSGQGHTNVFTASATGTTTGV---AISPDGHHIAFSYFLSL 751

Query: 281 AMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              IY  D+ +   + +      ++S   +S D   +V+ +   GK Q+Y+         
Sbjct: 752 TSYIYIADVVAKTNKNINTASATSVSKLQFSSDGRYLVYTAPAVGKSQIYLYDFVTGTNI 811

Query: 340 RISQD------KEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERL 385
            +S+D         +   P  SP G  IA+           S     + +    G    L
Sbjct: 812 LVSRDFSSSLAANGNSDSPALSPDGRFIAYRSSANNLVPGDSNGYPDLFLYDSFGGSTTL 871

Query: 386 L--------VEDSNLQAPTWSPSGRSLIFSR 408
           +          ++    P +SP G++L F  
Sbjct: 872 VSLSQTGNSTANNRSLYPVFSPDGQTLFFQS 902



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 69/245 (28%), Gaps = 23/245 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            PS +     P  S + Q V + +         Y   T       R  N    +     S
Sbjct: 633 LPSGNGDSSAPIISADGQYVLFRSKASNLAPGPYSSGTENLFFRDRQANKTYAVTTAGVS 692

Query: 267 -----SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
                 +G+             +     Q +      +        + SPD   I F   
Sbjct: 693 KTAMTPDGRFVTF----GAGSTVLVWSGQGHTNVFTASATGTTTGVAISPDGHHIAFSYF 748

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 +Y+        K I+     S     +S  G  + +T  +  K  I +      
Sbjct: 749 LSLTSYIYIADVVAKTNKNINTASATSVSKLQFSSDGRYLVYTAPAVGKSQIYLYDFVTG 808

Query: 382 QERL--------LVEDSNLQAPTWSPSGRSLIFSRKK------DGDTGSKLYSIDLNGRN 427
              L        L  + N  +P  SP GR + +          D +    L+  D  G +
Sbjct: 809 TNILVSRDFSSSLAANGNSDSPALSPDGRFIAYRSSANNLVPGDSNGYPDLFLYDSFGGS 868

Query: 428 ETLIN 432
            TL++
Sbjct: 869 TTLVS 873



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/345 (14%), Positives = 95/345 (27%), Gaps = 71/345 (20%)

Query: 122 DRLRVEFRLWDVKDRKQIIGKK----FFSSPASWRKI--AHTISDDIYQSITGEKGDFNS 175
                   +WD +    I+         SS ASW  I  +      I  ++T +  D   
Sbjct: 372 GTTNTAVYVWDAQLGTNILVSADQSHSVSSAASWPAITPSGQFVAFISSNLTPDSLDGLG 431

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY------- 228
            I   +    +     +L  + + G                PR S + + VA+       
Sbjct: 432 HIYLRNLQSST----TTLLDVKQTGLGAFV------PFATLPRISDDGRFVAFDTSSPNL 481

Query: 229 ATYDDEDILRVYLMDTRID----------RAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            + D+     V++ DT               P    N  S +     S+NG+      + 
Sbjct: 482 VSNDNNAAYDVFVRDTTSQITELTSSILPSLPALSANGPSSLSGYPISTNGRYVAFYSEA 541

Query: 279 --------DEAMDIYSVDLQSNATERLT------NTLFINISASYSPDSSQIVFES---- 320
                   +   D++  D  S     ++          ++   S S D   + F S    
Sbjct: 542 SNLVPNDTNGFRDVFIHDRISGTNVLVSVAVGGAGANGLSTEPSISADGRYVAFSSTATN 601

Query: 321 ----DREGKEQLYVMQSNGSDQKRIS------QDKEASYFDPVWSPQGDLIAFTK----- 365
               D      ++V          IS               P+ S  G  + F       
Sbjct: 602 LVSGDTNKFSDVFVRDLVTGSTSLISIGTNGLPSGNGDSSAPIISADGQYVLFRSKASNL 661

Query: 366 ----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
               +S     +    +  ++   +      +    +P GR + F
Sbjct: 662 APGPYSSGTENLFFRDRQANKTYAVTTAGVSKT-AMTPDGRFVTF 705



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 92/276 (33%), Gaps = 66/276 (23%)

Query: 221 PNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILA----------- 262
           P+   VA+A+        D  +I  +++ D ++     ++   ++M  A           
Sbjct: 174 PDGHFVAFASSANNLTAQDTNNIADIFVRDLQLG--TTKLATPKAMASAASPAYGPFSEL 231

Query: 263 PRFSSNGKRALISVQKDE-------AMDIYSVDL-------QSNATERLTNTLF-----I 303
           P  + +G+                   +IY  DL        S    +L  ++      I
Sbjct: 232 PDITPDGRYVAFFSNATNLVAGVTNIGEIYVRDLVAGTTSLASTNAHQLMQSIAGTNRTI 291

Query: 304 NISASYSPDSSQIVFESDR---EGKEQLYVMQSN---------GSDQKRISQDKEASYFD 351
           + + + S D S +V+E+      G     + + N          ++  R++  +EA    
Sbjct: 292 SYNHTISQDGSILVYEASPLTTAGNSYGVIFRHNLQTGLTLVINTNAARVALGEEAIDRT 351

Query: 352 PVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVED------SNLQAPTWSPS 400
              +P G  IA+   +         A+ V         L+  D      S    P  +PS
Sbjct: 352 LEMTPDGRFIAYATKNTLFPGTTNTAVYVWDAQLGTNILVSADQSHSVSSAASWPAITPS 411

Query: 401 GRSLIFSRKK----DGDTGSKLYSIDLNGRNETLIN 432
           G+ + F          D    +Y  +L     TL++
Sbjct: 412 GQFVAFISSNLTPDSLDGLGHIYLRNLQSSTTTLLD 447



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 64/234 (27%), Gaps = 66/234 (28%)

Query: 263 PRFSSNGKRALISVQKD-----------------------EAMDIYSVDLQSNATERLTN 299
           P  S++G+  L S + +                       +   + SV+L        T 
Sbjct: 51  PIISADGRYVLFSSRANNLTTNNAVATTFSQNVYLRDRLNQTTTLISVNLAG------TG 104

Query: 300 TLFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               + +   S +   ++FES        D      ++V     S     S     +  +
Sbjct: 105 GNGDSTAIEISTNGQYVLFESSASDLVANDTNNASDVFVRNLLTSTTTLASVSTNGTVAN 164

Query: 352 PVW-----SPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVE---------- 388
                   +P G  +AF           +     I V        +L             
Sbjct: 165 GASRSSAMTPDGHFVAFASSANNLTAQDTNNIADIFVRDLQLGTTKLATPKAMASAASPA 224

Query: 389 -DSNLQAPTWSPSGRSLIFSRKKDG-----DTGSKLYSIDLNGRNETLINTPAY 436
                + P  +P GR + F               ++Y  DL     +L +T A+
Sbjct: 225 YGPFSELPDITPDGRYVAFFSNATNLVAGVTNIGEIYVRDLVAGTTSLASTNAH 278



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 20/127 (15%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFE-----PRFSPNQQKV 226
           F+S   ++  +  + + K+ + + D   G NI         +        P  SP+ + +
Sbjct: 781 FSSDGRYLVYTAPA-VGKSQIYLYDFVTGTNILVSRDFSSSLAANGNSDSPALSPDGRFI 839

Query: 227 AYATY-------DDEDILRVYLMDTRIDRAPKRIGNFRSMILA------PRFSSNGKRAL 273
           AY +        D      ++L D+          +      A      P FS +G+   
Sbjct: 840 AYRSSANNLVPGDSNGYPDLFLYDSFGGSTTLVSLSQTGNSTANNRSLYPVFSPDGQTLF 899

Query: 274 ISVQKDE 280
                 +
Sbjct: 900 FQSWASD 906


>gi|219846977|ref|YP_002461410.1| WD40 domain-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219541236|gb|ACL22974.1| WD40 domain protein beta Propeller [Chloroflexus aggregans DSM
           9485]
          Length = 684

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 76/261 (29%), Gaps = 37/261 (14%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-------PKRIGNFRSMILAP 263
              L  P  SP  +        D D+ +V    T               + N        
Sbjct: 247 SDTLRMPAGSPPGRLEPLYMLFDGDVWQVRPQTTIAGPGMVGLAAGAVNLTNSAETETYL 306

Query: 264 RFSSNGKRALISVQKDEAM----------DIYSVDLQSNATERLTNTLFINISASYSPDS 313
             S  G        +               ++ + +       L           +SPD 
Sbjct: 307 AVSPRGDYLAFCRAEPGLDPADAVLPVPSTLWLLPVNGGEARPLAQPGVSCAEPVFSPDG 366

Query: 314 SQIVFESDREG----KEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSG 368
           S I F  D  G    +  +Y +  +G +  RI +   E S F P W   G LI   +   
Sbjct: 367 SAIAFSVDETGAIPTQWAIYTVSVDGGEPIRIEAALDEWSRFRPQWLSGGRLIYRVESPD 426

Query: 369 EKFAIGVMKKDG----------SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            + ++ +    G          +  RL+V          SP+G  +     +  D G+ L
Sbjct: 427 GRSSLFLRLPTGEVLDVGADLLTDARLVVRYRGFGELVASPNGDYVAVEALRADDPGADL 486

Query: 419 YSIDLNGR-----NETLINTP 434
             ++  G+      E  +  P
Sbjct: 487 LILNSAGQLVERIGEQRVTLP 507


>gi|167647064|ref|YP_001684727.1| peptidase S9 prolyl oligopeptidase [Caulobacter sp. K31]
 gi|167349494|gb|ABZ72229.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Caulobacter sp. K31]
          Length = 700

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 94/282 (33%), Gaps = 69/282 (24%)

Query: 214 LFEPRFSPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           + +PR SP+ + V Y+         +  + +++ + +   AP+R+        +PR+S +
Sbjct: 47  ISDPRVSPDGRFVVYSVRTMDYAANKASMSLWIANLKARMAPRRLAVSEGGATSPRWSPD 106

Query: 269 GKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS-----QIVF---- 318
           GK     S +      +Y  D    A  + T   F   +   +PD       Q VF    
Sbjct: 107 GKALYFLSGRTGGLDQVYRTDAAGEAAVQATKAPFDVGAFKIAPDGKTIVISQAVFPDCA 166

Query: 319 ----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                 DR       +          +  DK        W+            G +  + 
Sbjct: 167 TLDCTKDR-------LAAKGAKKATGVVFDKLFIRHWDAWN-----------DGLQNHLY 208

Query: 375 VMKKD-----GSQERLLVEDSNLQAPT----------WSPSGRSLIFS-----RKKDGDT 414
            +K D           L+   N  APT           +P G+S++FS     R++   T
Sbjct: 209 ALKLDDQGLATGAPVALMNGFNGDAPTKPFGGDEDFNITPDGKSVVFSAKPADREEAWST 268

Query: 415 GSKLYSIDLNGR---------NETLINTPAYASDP---QWVG 444
              ++   L+G          N+ + + P  + D     W+ 
Sbjct: 269 NYDVWRAPLDGSAAPANETSVNKAMDSQPGVSPDGKTEAWLA 310



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 56/347 (16%), Positives = 110/347 (31%), Gaps = 77/347 (22%)

Query: 164 QSITGEKGDFNSRILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           + I+  +   + R +  S       +     SL + +             +     PR+S
Sbjct: 45  ERISDPRVSPDGRFVVYSVRTMDYAANKASMSLWIANLKARMAPRRLAVSEGGATSPRWS 104

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + + + +     + +VY  D     A  +       + A + + +GK  +IS     
Sbjct: 105 PDGKALYFLSGRTGGLDQVYRTD-AAGEAAVQATKAPFDVGAFKIAPDGKTIVISQAV-- 161

Query: 281 AMDIYSVD-----------------------------------------------LQSNA 293
             D  ++D                                               L + A
Sbjct: 162 FPDCATLDCTKDRLAAKGAKKATGVVFDKLFIRHWDAWNDGLQNHLYALKLDDQGLATGA 221

Query: 294 TERLTNT---------LFINISASYSPDSSQIVFE---SDR----EGKEQLYVMQSNGSD 337
              L N             +   + +PD   +VF    +DR         ++    +GS 
Sbjct: 222 PVALMNGFNGDAPTKPFGGDEDFNITPDGKSVVFSAKPADREEAWSTNYDVWRAPLDGSA 281

Query: 338 QKR-ISQDKEASYFDPVWSPQGD---LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                +   +A    P  SP G     +A  +   E   + +M ++G + R L    +  
Sbjct: 282 APANETSVNKAMDSQPGVSPDGKTEAWLAMKRPGFEADRVAIMIREGEKVRELSPTWDRS 341

Query: 394 APT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           A +  WS  G++L  + +  G T  KL++ID+     T +    + S
Sbjct: 342 AQSIAWSGDGKTLYTTAEDVGQT--KLFAIDVKTGKVTALTGEGHVS 386



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 68/186 (36%), Gaps = 18/186 (9%)

Query: 267 SNGKRALISVQK-------DEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIV 317
            +GK  + S +            D++   L  +A      +    ++     SPD     
Sbjct: 248 PDGKSVVFSAKPADREEAWSTNYDVWRAPLDGSAAPANETSVNKAMDSQPGVSPDGKTEA 307

Query: 318 FES-DREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           + +  R G   +++ +M   G   + +S   + S     WS  G  +  T     +  + 
Sbjct: 308 WLAMKRPGFEADRVAIMIREGEKVRELSPTWDRSAQSIAWSGDGKTLYTTAEDVGQTKLF 367

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLI 431
            +     +   L  + ++ A  +S  G +L++++  +    ++LY++      G    L 
Sbjct: 368 AIDVKTGKVTALTGEGHVSA--FSLGGGTLVYAQD-NLKGPAQLYALSTAKKAGAPIKLT 424

Query: 432 NTPAYA 437
           N  A A
Sbjct: 425 NNNAEA 430



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 56/151 (37%), Gaps = 7/151 (4%)

Query: 188 IIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL--RVYLMDT 244
                +     DG A     T     +  +P  SP+ +  A+           RV +M  
Sbjct: 267 STNYDVWRAPLDGSAAPANETSVNKAMDSQPGVSPDGKTEAWLAMKRPGFEADRVAIMIR 326

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             ++  +    +     +  +S +GK    + +      ++++D+++     LT    ++
Sbjct: 327 EGEKVRELSPTWDRSAQSIAWSGDGKTLYTTAEDVGQTKLFAIDVKTGKVTALTGEGHVS 386

Query: 305 ISASYSPDSSQIVFESDR-EGKEQLYVMQSN 334
              ++S     +V+  D  +G  QLY + + 
Sbjct: 387 ---AFSLGGGTLVYAQDNLKGPAQLYALSTA 414


>gi|300867562|ref|ZP_07112212.1| Serine/threonine protein kinase with WD40 repeats [Oscillatoria sp.
           PCC 6506]
 gi|300334450|emb|CBN57382.1| Serine/threonine protein kinase with WD40 repeats [Oscillatoria sp.
           PCC 6506]
          Length = 622

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 43/267 (16%), Positives = 94/267 (35%), Gaps = 24/267 (8%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG    ++ +   +DG  I  L    + +     FSP+ + +A +++D      + L   
Sbjct: 358 SGSDDKTIKLWQLKDGQEICTLHGHNNSVYCV-AFSPDGKNIASSSHDK----TIRLWQV 412

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  +R     + + +  FS +G+    S   D ++ I+ V         L     + 
Sbjct: 413 NNGQEIRRFLGHTNAVYSVAFSLDGELIA-SSSWDRSVKIWRV-KDGQEIRTLMGHTNLV 470

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPD   I   S     + + V Q             +       +SP G+  A  
Sbjct: 471 YSVAFSPDGQLIASSS---WDKTIKVWQVKDGKLISTITIHKDCVRCVAFSPNGEFFASG 527

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI--- 421
                   +  +K       +      + +  ++P G  L  S  +      K++ +   
Sbjct: 528 SHDNT-IKLWWVKDWQEVLTIGGHSWYIDSIAFNPDGEFLASSSNQ----VIKIWRVKDG 582

Query: 422 ----DLNGRNETLINTPAYASDPQWVG 444
               +L G +   + + A++ D +++ 
Sbjct: 583 QEVCNLTG-HANSVYSVAFSPDGEYLA 608



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 81/230 (35%), Gaps = 18/230 (7%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
               +++   FSP++  +A  + D      + L   +  +    +    + +    FS +
Sbjct: 339 GHKNLVYSVAFSPDEDIIASGSDDK----TIKLWQLKDGQEICTLHGHNNSVYCVAFSPD 394

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQ 327
           GK    S   D+ + ++ V+       R         S ++S D   I   S DR     
Sbjct: 395 GKNIA-SSSHDKTIRLWQVN-NGQEIRRFLGHTNAVYSVAFSLDGELIASSSWDRS---- 448

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + + +     + R         +   +SP G LIA + +  +   +  +K       + +
Sbjct: 449 VKIWRVKDGQEIRTLMGHTNLVYSVAFSPDGQLIASSSWD-KTIKVWQVKDGKLISTITI 507

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               ++   +SP+G    F+     +T    +  D     + ++    ++
Sbjct: 508 HKDCVRCVAFSPNGEF--FASGSHDNTIKLWWVKD----WQEVLTIGGHS 551



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 58/341 (17%), Positives = 122/341 (35%), Gaps = 52/341 (15%)

Query: 94  PDSIPRFQDWN----SLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKK 143
            +S P+ Q+W      +G + LV   V     + +          +LW +KD ++I    
Sbjct: 322 AESQPKIQNWKCTNTLIGHKNLVY-SVAFSPDEDIIASGSDDKTIKLWQLKDGQEICTL- 379

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
                       H  ++ +Y       G         + +  S      L  ++ +G  I
Sbjct: 380 ------------HGHNNSVYCVAFSPDGK--------NIASSSHDKTIRLWQVN-NGQEI 418

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R         ++   FS + + +A +++D      V +   +  +  + +    +++ + 
Sbjct: 419 RRFL-GHTNAVYSVAFSLDGELIASSSWDR----SVKIWRVKDGQEIRTLMGHTNLVYSV 473

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G+    S   D+ + ++ V         +T         ++SP+       S   
Sbjct: 474 AFSPDGQLIA-SSSWDKTIKVWQV-KDGKLISTITIHKDCVRCVAFSPNGEFFASGSHDN 531

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             +  +V       Q+ ++    + Y D   ++P G+ +A    S +   I  +K DG +
Sbjct: 532 TIKLWWVKDW----QEVLTIGGHSWYIDSIAFNPDGEFLA--SSSNQVIKIWRVK-DGQE 584

Query: 383 ERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              L   +N + +  +SP G  L        D   KL+  D
Sbjct: 585 VCNLTGHANSVYSVAFSPDGEYLA---SGSSDKTIKLWQCD 622


>gi|218248703|ref|YP_002374074.1| hypothetical protein PCC8801_3979 [Cyanothece sp. PCC 8801]
 gi|257061766|ref|YP_003139654.1| hypothetical protein Cyan8802_4021 [Cyanothece sp. PCC 8802]
 gi|218169181|gb|ACK67918.1| conserved hypothetical protein [Cyanothece sp. PCC 8801]
 gi|256591932|gb|ACV02819.1| WD40 domain protein beta Propeller [Cyanothece sp. PCC 8802]
          Length = 171

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 3/131 (2%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSP 311
           N +S    P +S NG+    +  ++   DI+  DLQ  +   L N    + S    S S 
Sbjct: 39  NSQSPDEYPAYSGNGRYLAFASDRNGHRDIFLFDLQQRSLVPLPNLNRRDSSQDQPSLSA 98

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I + S   GK  + V        + ++ + + +   P  S  G  +AF      ++
Sbjct: 99  DGRYIAYVSTERGKTDIMVYDRQRQRSELLTVNVKGTVKQPTISGDGRKVAFQTSQLGQW 158

Query: 372 AIGVMKKDGSQ 382
            I ++ ++ + 
Sbjct: 159 DIAIINRNTNS 169



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 4/130 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           N+   +   +YS +   + F SDR G   +++          +     +++S   P  S 
Sbjct: 39  NSQSPDEYPAYSGNGRYLAFASDRNGHRDIFLFDLQQRSLVPLPNLNRRDSSQDQPSLSA 98

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  IA+      K  I V  +   +  LL  +    ++ PT S  GR + F   + G  
Sbjct: 99  DGRYIAYVSTERGKTDIMVYDRQRQRSELLTVNVKGTVKQPTISGDGRKVAFQTSQLGQW 158

Query: 415 GSKLYSIDLN 424
              + + + N
Sbjct: 159 DIAIINRNTN 168



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 53/133 (39%), Gaps = 2/133 (1%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           +       P +S N + +A+A+  +    + ++ +  R       +    S    P  S+
Sbjct: 39  NSQSPDEYPAYSGNGRYLAFASDRNGHRDIFLFDLQQRSLVPLPNLNRRDSSQDQPSLSA 98

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKE 326
           +G+       +    DI   D Q   +E LT N        + S D  ++ F++ + G+ 
Sbjct: 99  DGRYIAYVSTERGKTDIMVYDRQRQRSELLTVNVKGTVKQPTISGDGRKVAFQTSQLGQW 158

Query: 327 QLYVMQSNGSDQK 339
            + ++  N + Q+
Sbjct: 159 DIAIINRNTNSQE 171



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 45/123 (36%), Gaps = 14/123 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYL-------------TPSRDQILFEPRFSPNQQKVAYATYD 232
           SG  +      DR+G    +L                RD    +P  S + + +AY + +
Sbjct: 50  SGNGRYLAFASDRNGHRDIFLFDLQQRSLVPLPNLNRRDSSQDQPSLSADGRYIAYVSTE 109

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 + + D +  R+     N +  +  P  S +G++      +    DI  ++  +N
Sbjct: 110 RGKT-DIMVYDRQRQRSELLTVNVKGTVKQPTISGDGRKVAFQTSQLGQWDIAIINRNTN 168

Query: 293 ATE 295
           + E
Sbjct: 169 SQE 171



 Score = 37.3 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 32/71 (45%), Gaps = 12/71 (16%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT----------PA 435
           L   S  + P +S +GR L F+  ++G     ++  DL  R+   +            P+
Sbjct: 38  LNSQSPDEYPAYSGNGRYLAFASDRNGHR--DIFLFDLQQRSLVPLPNLNRRDSSQDQPS 95

Query: 436 YASDPQWVGFM 446
            ++D +++ ++
Sbjct: 96  LSADGRYIAYV 106


>gi|157961860|ref|YP_001501894.1| peptidase S9 prolyl oligopeptidase [Shewanella pealeana ATCC
           700345]
 gi|157846860|gb|ABV87359.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella pealeana ATCC 700345]
          Length = 683

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 88/298 (29%), Gaps = 73/298 (24%)

Query: 218 RFSPNQQKVAYATY----DDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             S +  K+ YA      + E    +Y+ D T      K+I +      +  F+ N K  
Sbjct: 42  ALSNDGTKIVYAVKNIDAEGEASTDLYIQDLTSSSSKAKQITSAAGTEHSVAFAPNDKSI 101

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------------- 317
                ++ +  +Y + L      ++T+          S D  Q+V               
Sbjct: 102 YFLAARNGSSQVYELALDGGEAIQVTDFPLNVEGYKLSQDGKQVVVNMRVFPDCKDLACS 161

Query: 318 ---FE-----------------------SDREGKEQLYVMQSNGSDQKR---ISQDKEAS 348
              F                        SD   +  L+V Q NG        ++   +  
Sbjct: 162 KDKFTAEAERDTTGREYKQLMVRHWDTWSDHS-RSHLFVAQLNGEKVTSAIDVTAGLDTE 220

Query: 349 YFDPVWS--------PQGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVEDSNLQ 393
                +S        P G  + +T  +          + +  +   G +   L E +   
Sbjct: 221 TPPKPFSGMEEVTFTPDGKHVVYTAKAPGKDQAWITNYDLWKVSVAGGEAENLTESNKAW 280

Query: 394 --APTWSPSGRSLIFSRKKDGDTGSKLYSI----DLNGRNETLINTPAYASDPQWVGF 445
              PT+S  GR L +         +  Y I     + G+ + +   P +   P  + F
Sbjct: 281 DAHPTYSADGRYLAYFAMTKPGFEADRYRIILRDTVTGQEKEV--APLWDRSPSSLAF 336



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 88/275 (32%), Gaps = 41/275 (14%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             +    +E   +G     L V   D                   +S + +   +    +
Sbjct: 162 KDKFTAEAERDTTGREYKQLMVRHWD------------------TWSDHSRSHLFVAQLN 203

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-------AMDIYS 286
            + +   +  T           F  M     F+ +GK  + + +            D++ 
Sbjct: 204 GEKVTSAIDVTAGLDTETPPKPFSGME-EVTFTPDGKHVVYTAKAPGKDQAWITNYDLWK 262

Query: 287 VDLQSNATERLT-NTLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSD 337
           V +     E LT +    +   +YS D   +         FE+DR    ++ +  +    
Sbjct: 263 VSVAGGEAENLTESNKAWDAHPTYSADGRYLAYFAMTKPGFEADR---YRIILRDTVTGQ 319

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +K ++   + S     +      +  T     + +I  +       + +  + +      
Sbjct: 320 EKEVAPLWDRSPSSLAFGKDNKTLYVTAQDVGQVSIFEVNTQFGDVKTIYNEGSNSIVGV 379

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +   +IFS K   + G  LY+I+L+G+N   + 
Sbjct: 380 --NNDKIIFSHKSLVEPG-DLYTINLDGQNLNRVT 411



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 86/250 (34%), Gaps = 68/250 (27%)

Query: 262 APRFSSNGKRALISV-----QKDEAMDIYSVDL--QSNATERLTNTLFINISASYSPDSS 314
           +   S++G + + +V     + + + D+Y  DL   S+  +++T+      S +++P+  
Sbjct: 40  SAALSNDGTKIVYAVKNIDAEGEASTDLYIQDLTSSSSKAKQITSAAGTEHSVAFAPNDK 99

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-------- 366
            I F + R G  Q+Y +  +G +  +++ D   +      S  G  +             
Sbjct: 100 SIYFLAARNGSSQVYELALDGGEAIQVT-DFPLNVEGYKLSQDGKQVVVNMRVFPDCKDL 158

Query: 367 --------------------------------SGEKFAIGVMKKDGSQER--------LL 386
                                              +  + V + +G +          L 
Sbjct: 159 ACSKDKFTAEAERDTTGREYKQLMVRHWDTWSDHSRSHLFVAQLNGEKVTSAIDVTAGLD 218

Query: 387 VED-----SNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNGRNETLIN--TP 434
            E      S ++  T++P G+ ++++ K  G      T   L+ + + G     +     
Sbjct: 219 TETPPKPFSGMEEVTFTPDGKHVVYTAKAPGKDQAWITNYDLWKVSVAGGEAENLTESNK 278

Query: 435 AYASDPQWVG 444
           A+ + P +  
Sbjct: 279 AWDAHPTYSA 288



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 62/185 (33%), Gaps = 10/185 (5%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G              + I    L  +   G     LT S       P +S + 
Sbjct: 231 EVTFTPDGKHVVYTAKAPGKDQAWITNYDLWKVSVAGGEAENLTESNKAWDAHPTYSADG 290

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D  R+ L DT   +  +    +     +  F  + K   ++ Q  
Sbjct: 291 RYLAYFAMTKPGFEADRYRIILRDTVTGQEKEVAPLWDRSPSSLAFGKDNKTLYVTAQDV 350

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSD 337
             + I+ V+ Q    + + N    +I      ++ +I+F S +       LY +  +G +
Sbjct: 351 GQVSIFEVNTQFGDVKTIYNEGSNSIVGV---NNDKIIF-SHKSLVEPGDLYTINLDGQN 406

Query: 338 QKRIS 342
             R++
Sbjct: 407 LNRVT 411


>gi|226308474|ref|YP_002768434.1| S9 family peptidase [Rhodococcus erythropolis PR4]
 gi|226187591|dbj|BAH35695.1| putative S9 family peptidase [Rhodococcus erythropolis PR4]
          Length = 1119

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 96/307 (31%), Gaps = 58/307 (18%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T      + RI +V          N   +          L  +       P + P    +
Sbjct: 34  TSIAVSASGRIAYVRTEANPAADTNEHSIWLA----SPQLQLTAGPADTSPAWHPVSTLL 89

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALISVQKDE---- 280
            +   D     +++ +D     A +            AP FS +G R   S   D     
Sbjct: 90  VFVRPDSSGTPQLWKVDATGGPAVQMTTTAQLPLGAGAPVFSPDGARIAFSAPVDRTAAG 149

Query: 281 -----------------------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                                     ++  DL + +  +LT+  +     +YSPD +++ 
Sbjct: 150 SSHLLVAKRLNYKVDGSGVRGSVRAHLFEFDLAAGSLRQLTDGDWDASHPAYSPDGTELA 209

Query: 318 FESDREGKEQL------YVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-- 368
           F +  +G   L      + +   + +   R+            W+P GD +    +    
Sbjct: 210 FTAAMDGNADLTRASSAWTVSLTDLASAPRMLGHARGIAGPLTWTPVGDAVVAVGWHTPI 269

Query: 369 -EKFAIGVMKKD-GSQERLLVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTG 415
                + V+ +D   ++R L  + +             AP ++  G  ++F  +  G T 
Sbjct: 270 IHNNELLVLHRDQRVEDRSLTSELDRNVMPGGTGYPGGAPCFTADGD-IVFCIRNHGST- 327

Query: 416 SKLYSID 422
            +L+ +D
Sbjct: 328 -ELHKVD 333



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 33/102 (32%), Gaps = 21/102 (20%)

Query: 360 LIAFTKF------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            IA+ +          + +I +       +  L       +P W P    L+F R  D  
Sbjct: 43  RIAYVRTEANPAADTNEHSIWLASP----QLQLTAGPADTSPAWHPVSTLLVFVR-PDSS 97

Query: 414 TGSKLYSIDLNGRNETLINT----------PAYASDPQWVGF 445
              +L+ +D  G     + T          P ++ D   + F
Sbjct: 98  GTPQLWKVDATGGPAVQMTTTAQLPLGAGAPVFSPDGARIAF 139


>gi|323360025|ref|YP_004226421.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Microbacterium
           testaceum StLB037]
 gi|323276396|dbj|BAJ76541.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Microbacterium
           testaceum StLB037]
          Length = 656

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 25/187 (13%)

Query: 263 PRFSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P  SS+G  A+ +  +           ++ VDL      RLT  + ++ S   SPD S I
Sbjct: 15  PVLSSDGGFAVFATSRPDLAADRGVGQLWRVDLPDGTPRRLTRGV-VDRSPRLSPDDSTI 73

Query: 317 VF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            F  +D  G+ Q++V+ + G +  +++ ++     D  WSP G  +AF+    E    G 
Sbjct: 74  AFLRADERGRAQVFVVSATGGEPVQVT-EQHGGVTDLAWSPDGARLAFSARVPEPGRYGT 132

Query: 376 M---KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +          R +          W  +G  L +      D  + L+ +D+         
Sbjct: 133 VEGRDAAAEPPRRITGI------RWHANG--LGYL-----DRPTHLFVVDVPSMEAEPFY 179

Query: 433 TPAYASD 439
            PA A D
Sbjct: 180 APAPAID 186



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 89/285 (31%), Gaps = 66/285 (23%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           +      L  +D  DG   R     R  +   PR SP+   +A+   D+    +V+++ +
Sbjct: 35  ADRGVGQLWRVDLPDGTPRRLT---RGVVDRSPRLSPDDSTIAFLRADERGRAQVFVV-S 90

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLT--- 298
                P ++      +    +S +G R   S +  E     +V   D  +    R+T   
Sbjct: 91  ATGGEPVQVTEQHGGVTDLAWSPDGARLAFSARVPEPGRYGTVEGRDAAAEPPRRITGIR 150

Query: 299 ------------------NTLFINISASYSP-----DSSQIVFESDREGKEQLYVMQSNG 335
                             +   +     Y+P        + V  SD              
Sbjct: 151 WHANGLGYLDRPTHLFVVDVPSMEAEPFYAPAPAIDAPDKRVVASD-------------- 196

Query: 336 SDQKRISQDKEASYFDPVWSPQGDL------IAFTKFSGEKFAIGVMKKDGSQERLLVED 389
               R++ + + S+   VW+  G        +  T     +  I  +  +G  ER ++  
Sbjct: 197 --ATRLT-EGDTSWNGVVWTRDGAELLSVPDVIETDRRDLRDRIVAIAVEGGAEREVLGT 253

Query: 390 SNL---QAPTWSPSGRSLIFSRKKDGDT------GSKLYSIDLNG 425
           +          +P G     +     +       G  L++++ +G
Sbjct: 254 AADLSISEVAVAPDGAVFALANDVGPEGVDFVAPGVALFALEADG 298



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 30/104 (28%), Gaps = 8/104 (7%)

Query: 348 SYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           S   PV S  G    F               +  +       R L      ++P  SP  
Sbjct: 11  SVGRPVLSSDGGFAVFATSRPDLAADRGVGQLWRVDLPDGTPRRLTRGVVDRSPRLSPDD 70

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQWVG 444
            ++ F R  D    ++++ +    G    +       +D  W  
Sbjct: 71  STIAFLR-ADERGRAQVFVVSATGGEPVQVTEQHGGVTDLAWSP 113


>gi|159124379|gb|EDP49497.1| NACHT and WD domain protein [Aspergillus fumigatus A1163]
          Length = 989

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 56/294 (19%), Positives = 100/294 (34%), Gaps = 32/294 (10%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            VI +  D +  EF L D         K+F       R+IA      IY +       F 
Sbjct: 629 TVIPDDDDSVLAEF-LHD--------AKRFALKN---RRIADEAPLQIYCAGL----VFA 672

Query: 175 SRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +   +     + +          +   GA ++ L       +    FSP+ + +A    
Sbjct: 673 PQTAMIRREFETELPSWICQFPQVNETWGAELQTL-EGHSISVNSVAFSPDNRLLA---- 727

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              D   V L D       + +      + +  FS +G+     +  D  + ++  DL +
Sbjct: 728 SGSDNCTVQLWDAATGDLQQTLEGHSGWVNSVAFSPDGRLLAAGLFDDSTVRLW--DLAT 785

Query: 292 NATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              ++ L       +S ++SPD   +V  SD      + +      D ++  +    S  
Sbjct: 786 GDLQQTLQCHSGSVLSVAFSPDGRLLVSGSD---DCTVCLWDPTTGDLQQTLRGHSGSVN 842

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
               SP G L+A +  S     +        QE L  E S  +   +S  G +L
Sbjct: 843 SVALSPDGQLLA-SGSSDRTVRLWDSATGALQETLRTEMSATEL-KFSLDGSTL 894



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 67/201 (33%), Gaps = 15/201 (7%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
           ++       + +      + +  FS +  R L S   +  + ++  D  +   ++ L   
Sbjct: 696 VNETWGAELQTLEGHSISVNSVAFSPD-NRLLASGSDNCTVQLW--DAATGDLQQTLEGH 752

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SPD   +      +   +L+       D ++  Q    S     +SP G L
Sbjct: 753 SGWVNSVAFSPDGRLLAAGLFDDSTVRLW--DLATGDLQQTLQCHSGSVLSVAFSPDGRL 810

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +       +   + +        +  +     ++ +   SP G+ L        D   +L
Sbjct: 811 LV---SGSDDCTVCLWDPTTGDLQQTLRGHSGSVNSVALSPDGQLLA---SGSSDRTVRL 864

Query: 419 YSIDLNGRNETLINTPAYASD 439
           +     G  +  + T   A++
Sbjct: 865 WD-SATGALQETLRTEMSATE 884


>gi|53712233|ref|YP_098225.1| hypothetical protein BF0941 [Bacteroides fragilis YCH46]
 gi|52215098|dbj|BAD47691.1| hypothetical protein [Bacteroides fragilis YCH46]
          Length = 478

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 56/331 (16%), Positives = 115/331 (34%), Gaps = 68/331 (20%)

Query: 147 SPASWRKIAHTISD-DIYQSITGEKGDFNSRILFVSESVVSGIIKNSL------------ 193
               W+K+    +  +I+  IT  +G   +R   + +++ +  I   L            
Sbjct: 87  PTKKWKKLLQKAAGKEIFIRITLLRGGKWTRYADIKDTISNEPIDEYLVYRLLYPGYELW 146

Query: 194 -----CVMDRDGANIRYLTPSRD---QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                   D  G     +  +R+   Q +    F+ N  +        +    +   + +
Sbjct: 147 NEMGIYQRDLTGYEETPIAENRNFGKQCINCHAFNQNSPETMMVHVRGKSGGTLICKNGK 206

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------DEAMDIYSVDL-------QS 291
           +++   +   F++      +  +G+    S+ +            I   DL        +
Sbjct: 207 VEKVNTKPEGFKNGGTYAAWHPSGRYIAFSMNEIQQFFHSSGQKPIEVSDLAADLMVYDT 266

Query: 292 NATERLTNT-----LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                LT++      ++    +++PD   + F      KE++  + S   D  RI  D +
Sbjct: 267 EKKTFLTDSLICGERYMETFPNWTPDGKTLYFCRANAYKEKM-PLDSIRYDLCRIGFDPK 325

Query: 347 ASYFD-----------------PVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQ 382
           +  F                  P  SP G  + FT      F+I        ++  D  +
Sbjct: 326 SGKFGTPECVYRASEQGKSVSFPRVSPDGKHLMFTLSDYGNFSIWHPESELCLLTMDTGE 385

Query: 383 ERLL--VEDSNLQAP-TWSPSGRSLIFSRKK 410
            RLL  V  +++++  TWS SGR  +FS K+
Sbjct: 386 IRLLNEVNSNDVESFHTWSSSGRWFVFSSKR 416


>gi|17227780|ref|NP_484328.1| WD-40 repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17135262|dbj|BAB77808.1| WD-40 repeat protein [Nostoc sp. PCC 7120]
          Length = 1711

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 57/302 (18%), Positives = 103/302 (34%), Gaps = 33/302 (10%)

Query: 133  VKDRKQIIGKKFFSSPASWRKIAHTISDDIY---QSITGEKGDFNSRILFVSESVV--SG 187
            V+  K++        P +  + A  +   +Y   +        + + + +  +  V  SG
Sbjct: 1065 VQAGKEVQNISLGIPPDTRTQTATILQQAVYNTQERNRLLHNAWVTSVSYSPDGEVIASG 1124

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             + N++ +  RDG  +  LT   D +     FSP+ + +A A+ D      + L      
Sbjct: 1125 SVDNTIHLWRRDGKLLTTLTGHNDGVNSV-SFSPDGEILASASADS----TIKLWQRNGQ 1179

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                  G+ +  + +  FS NG+    S   D  ++++S          L        S 
Sbjct: 1180 LITTLKGHDQG-VKSVSFSPNGEIIA-SGSSDHTINLWS--RAGKLLLSLNGHSQGVNSI 1235

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKF 366
             +SP+   I   SD +G  +L+ +      +  I+            +SP G  I     
Sbjct: 1236 KFSPEGDTIASASD-DGTIRLWSLD----GRPLITIPSHTKQVLAVTFSPDGQTIVSAGA 1290

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSID 422
                     +K       LL          W    SP GR +  +     D    L+S D
Sbjct: 1291 DN------TVKLWSRNGTLLTTLEGHNEAVWQVIFSPDGRLIATAS---ADKTITLWSRD 1341

Query: 423  LN 424
             N
Sbjct: 1342 GN 1343



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 109/276 (39%), Gaps = 26/276 (9%)

Query: 134  KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES--VVSGIIKN 191
             D K+I      S+  +W     ++   + Q+++    D  + I F  ++  V      +
Sbjct: 1403 NDGKKITSLSTDSTMKTW-----SLDGKLLQTLSSPLPD-VTSISFTPDNKIVALASPDH 1456

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            ++ + +R G  +R L P  +  +    FSPN+Q +A  + D    ++++ ++    R  K
Sbjct: 1457 TIHLYNRQGGLLRSL-PGHNHWITSLSFSPNKQILASGSAD--KTIKLWSVN---GRLLK 1510

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             +      +   +FS++GK  + S   D+ + I+S+D        L        S + SP
Sbjct: 1511 TLLGHNGWVTDIKFSADGKNIV-SASADKTIKIWSLD--GRLIRTLQGHSASVWSVNLSP 1567

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            D   +   S     E + +   NG     + +      ++  +SP G  IA     G   
Sbjct: 1568 DGQTLASTSQ---DETIKLWNLNGELIYTL-RGHSDVVYNLSFSPDGKTIASASDDGT-- 1621

Query: 372  AIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
             I +            +     +++ ++SP G+ L 
Sbjct: 1622 -IKLWNVPNGTLLKTFQGHRGGVRSVSFSPDGKILA 1656



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 77/201 (38%), Gaps = 15/201 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ +   +G  ++ L    +  + + +FS + + +  A+ D    ++++ +D  
Sbjct: 1492 SGSADKTIKLWSVNGRLLKTLL-GHNGWVTDIKFSADGKNIVSASAD--KTIKIWSLD-- 1546

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              R  + +    + + +   S +G+    S  +DE + ++  +L       L     +  
Sbjct: 1547 -GRLIRTLQGHSASVWSVNLSPDGQTLA-STSQDETIKLW--NLNGELIYTLRGHSDVVY 1602

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            + S+SPD   I   SD      + +         +  Q          +SP G ++A   
Sbjct: 1603 NLSFSPDGKTIASASD---DGTIKLWNVPNGTLLKTFQGHRGGVRSVSFSPDGKILA--- 1656

Query: 366  FSGEKFAIGVMKKDGSQERLL 386
              G    + V   +G + + L
Sbjct: 1657 SGGHDTTVKVWNLEGIELQTL 1677



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 60/309 (19%), Positives = 112/309 (36%), Gaps = 46/309 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++  G D   V  RLW V      + K F+    S   +    S+D            
Sbjct: 1364 GNILASGSDDNTV--RLWTVNRT---LPKTFYGHKGSVSYV--RFSND------------ 1404

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    + + S    +++     DG  ++ L+ S    +    F+P+ + VA A+ D 
Sbjct: 1405 -------GKKITSLSTDSTMKTWSLDGKLLQTLS-SPLPDVTSISFTPDNKIVALASPDH 1456

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                    +  R     + +      I +  FS N K+ L S   D+ + ++SV+     
Sbjct: 1457 -----TIHLYNRQGGLLRSLPGHNHWITSLSFSPN-KQILASGSADKTIKLWSVN--GRL 1508

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             + L           +S D   IV  S     + + +   +G   + + Q   AS +   
Sbjct: 1509 LKTLLGHNGWVTDIKFSADGKNIVSAS---ADKTIKIWSLDGRLIRTL-QGHSASVWSVN 1564

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDG 412
             SP G  +A T        I +   +G     L   S++    ++SP G+++  +     
Sbjct: 1565 LSPDGQTLASTSQDET---IKLWNLNGELIYTLRGHSDVVYNLSFSPDGKTIASASD--- 1618

Query: 413  DTGSKLYSI 421
            D   KL+++
Sbjct: 1619 DGTIKLWNV 1627



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 89/256 (34%), Gaps = 27/256 (10%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             S      L  ++R    +          +   RFS + +K+   +   +  ++ + +D 
Sbjct: 1370 GSDDNTVRLWTVNRT---LPKTFYGHKGSVSYVRFSNDGKKI--TSLSTDSTMKTWSLD- 1423

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               +  + + +    + +  F+ + K   ++        I+  + Q      L       
Sbjct: 1424 --GKLLQTLSSPLPDVTSISFTPDNKIVALAS---PDHTIHLYNRQGGLLRSLPGHNHWI 1478

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S S+SP+   +   S     + + +   NG   K +         D  +S  G  I   
Sbjct: 1479 TSLSFSPNKQILASGS---ADKTIKLWSVNGRLLKTLL-GHNGWVTDIKFSADGKNIVSA 1534

Query: 365  KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                    I +   DG   R L    +++ +   SP G++L  + +   D   KL+  +L
Sbjct: 1535 SADKT---IKIWSLDGRLIRTLQGHSASVWSVNLSPDGQTLASTSQ---DETIKLW--NL 1586

Query: 424  NGRNETLINTPAYASD 439
            NG    LI T    SD
Sbjct: 1587 NGE---LIYTLRGHSD 1599



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 93/258 (36%), Gaps = 38/258 (14%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG   +++ +  R G  +        Q +   +FSP    +A A+ D    +R++ +D  
Sbjct: 1205 SGSSDHTINLWSRAGK-LLLSLNGHSQGVNSIKFSPEGDTIASASDD--GTIRLWSLD-- 1259

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              R    I +    +LA  FS +G+  + S   D  + ++     S     LT     N 
Sbjct: 1260 -GRPLITIPSHTKQVLAVTFSPDGQTIV-SAGADNTVKLW-----SRNGTLLTTLEGHN- 1311

Query: 306  SASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             A +    SPD   I   S     ++   + S   +                +SP G+++
Sbjct: 1312 EAVWQVIFSPDGRLIATAS----ADKTITLWSRDGNILGTFAGHNHEVNSLSFSPDGNIL 1367

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVED-----SNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            A +        +  +       R L +       ++    +S  G+ +        D+  
Sbjct: 1368 A-SGSDDNTVRLWTVN------RTLPKTFYGHKGSVSYVRFSNDGKKI---TSLSTDSTM 1417

Query: 417  KLYSIDLNGRNETLINTP 434
            K +S  L+G+    +++P
Sbjct: 1418 KTWS--LDGKLLQTLSSP 1433



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 76/241 (31%), Gaps = 54/241 (22%)

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            L     +   +      + + +  +S +G+    S   D  + ++  D        LT  
Sbjct: 1090 LQQAVYNTQERNRLLHNAWVTSVSYSPDGEVIA-SGSVDNTIHLWRRD--GKLLTTLTGH 1146

Query: 301  LFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQDKEA----- 347
                 S S+SPD   +   S         R G + +  ++ +    K +S          
Sbjct: 1147 NDGVNSVSFSPDGEILASASADSTIKLWQRNG-QLITTLKGHDQGVKSVSFSPNGEIIAS 1205

Query: 348  -------------------------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                                           +SP+GD IA     G    I +   DG  
Sbjct: 1206 GSSDHTINLWSRAGKLLLSLNGHSQGVNSIKFSPEGDTIASASDDGT---IRLWSLDGRP 1262

Query: 383  E-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
               +      + A T+SP G++++       D   KL+S     RN TL+ T    ++  
Sbjct: 1263 LITIPSHTKQVLAVTFSPDGQTIV---SAGADNTVKLWS-----RNGTLLTTLEGHNEAV 1314

Query: 442  W 442
            W
Sbjct: 1315 W 1315



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 48/116 (41%), Gaps = 8/116 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ S     ++ + + +G  + Y       +++   FSP+ + +A A+ D      + L
Sbjct: 1570 QTLASTSQDETIKLWNLNGE-LIYTLRGHSDVVYNLSFSPDGKTIASASDDG----TIKL 1624

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             +       K     R  + +  FS +GK  L S   D  + ++  +L+    + L
Sbjct: 1625 WNVPNGTLLKTFQGHRGGVRSVSFSPDGK-ILASGGHDTTVKVW--NLEGIELQTL 1677


>gi|302685219|ref|XP_003032290.1| hypothetical protein SCHCODRAFT_32238 [Schizophyllum commune H4-8]
 gi|300105983|gb|EFI97387.1| hypothetical protein SCHCODRAFT_32238 [Schizophyllum commune H4-8]
          Length = 765

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 57/318 (17%), Positives = 111/318 (34%), Gaps = 38/318 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+V+  G +   +  RLWD    +Q+            R          Y+S+T      
Sbjct: 356 GKVLASGSEDCTI--RLWDTATCQQLG--------EPLRSQ--------YESVTSVAFSC 397

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +         +G     +  +         L      +     FSP+  +VA    DD
Sbjct: 398 DGK----HLMTCTGNTTVRIWDVASRQQVREALGHGAWPVSI--AFSPDGSRVASGALDD 451

Query: 234 EDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQS 291
                V L D     +  + +      + A  FS +G   + S   D  + I+ +  +Q 
Sbjct: 452 ----SVRLWDVESGCQVGEALEGHDDAVTAVAFSPDGTHIV-SGSTDCTIRIWELPSVQH 506

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYF 350
            +  +  N   I +S ++SPD   I   +  +G   + +  ++   Q   + +  E    
Sbjct: 507 KSPPKHHNRQDICLSITFSPDGRLIA-SAMLDGT--IVLWDASTGQQVGYVLRGHEDRVT 563

Query: 351 DPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
              +SP G  +A   F      + +G  ++ G+  R   +   +   T+SP G+ ++   
Sbjct: 564 SVSFSPDGRYLASGSFDCTVRLWDVGTGQRVGAVRREPSDVHRVHHVTFSPDGKHVLSGS 623

Query: 409 KKDGDTGSKLYSIDLNGR 426
              G       ++   GR
Sbjct: 624 DY-GSLRIWTAAVKTQGR 640



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 51/316 (16%), Positives = 101/316 (31%), Gaps = 33/316 (10%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA------HTIS------DDIYQ 164
            +     L    RLWDV+   Q+ G+       +   +A      H +S        I++
Sbjct: 442 SRVASGALDDSVRLWDVESGCQV-GEALEGHDDAVTAVAFSPDGTHIVSGSTDCTIRIWE 500

Query: 165 SI---------TGEKGDFNSRILFVSESV--VSGIIKNSLCVMDR-DGANIRYLTPSRDQ 212
                         + D    I F  +     S ++  ++ + D   G  + Y+    + 
Sbjct: 501 LPSVQHKSPPKHHNRQDICLSITFSPDGRLIASAMLDGTIVLWDASTGQQVGYVLRGHED 560

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +    FSP+ + +A  ++D    L       R+    +   +    +    FS +GK  
Sbjct: 561 RVTSVSFSPDGRYLASGSFDCTVRLWDVGTGQRVGAVRREPSDVHR-VHHVTFSPDGKHV 619

Query: 273 LISVQKDEAMDIYS--VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           L S     ++ I++  V  Q       +         +YSPD   +   S+      + V
Sbjct: 620 L-SGSDYGSLRIWTAAVKTQGRVGTAFSGHSGTITVVAYSPDGKLLATGSE---DHTVRV 675

Query: 331 MQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
             +              A+     +SP G  +      G       M        L    
Sbjct: 676 WDAMTGHPVVDAQTGHAAAITYVSFSPDGGRVISCANDGTIRVWDTMTGKQIGSALRGHY 735

Query: 390 SNLQAPTWSPSGRSLI 405
           + + +  ++P GR ++
Sbjct: 736 AAVDSVAFAPDGRHVV 751



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 15/191 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQ 277
           FSP+ +++A A+ D      V L D  I +     +G     + +  FS +GK    S  
Sbjct: 309 FSPDGKRLASASND----CTVRLWDPAIGKQIGLTMGAHTKSVWSVAFSPDGKVLA-SGS 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D  + ++         E L +      S ++S D   ++      G   + +       
Sbjct: 364 EDCTIRLWDTATCQQLGEPLRSQYESVTSVAFSCDGKHLMTC---TGNTTVRIWDVASRQ 420

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQA 394
           Q R +    A      +SP G  +A          + +   +      E L   D  + A
Sbjct: 421 QVREALGHGAWPVSIAFSPDGSRVASGALDDS---VRLWDVESGCQVGEALEGHDDAVTA 477

Query: 395 PTWSPSGRSLI 405
             +SP G  ++
Sbjct: 478 VAFSPDGTHIV 488



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 58/160 (36%), Gaps = 17/160 (10%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNATERLTNTLFINISASYS 310
           I +  + +LA   S +G+    S  KD  + ++      Q  A  R      I  + +YS
Sbjct: 211 IIHTPAEVLAMSISPDGQYIA-SGLKDGTVCVWGAITGRQVGAAHR--GHEDIVSAVAYS 267

Query: 311 PDSSQIVFES-DREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           P+   I   S DR     + + +++   Q            +  V+SP G  +A      
Sbjct: 268 PNGEVIASASKDRT----IRLWEASTGMQICGTLTGHTHHVYSVVFSPDGKRLASASNDC 323

Query: 369 EKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLI 405
               + +      ++  L       ++ +  +SP G+ L 
Sbjct: 324 T---VRLWDPAIGKQIGLTMGAHTKSVWSVAFSPDGKVLA 360



 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 49/148 (33%), Gaps = 15/148 (10%)

Query: 271 RALISVQKDEAMDIYSV------DLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           R LI+ + D+ + +Y        D        + +T    ++ S SPD   I   S  + 
Sbjct: 180 RLLITTRPDDDIRLYLAGNAPEDDWPPGEPF-IIHTPAEVLAMSISPDGQYIA--SGLKD 236

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE- 383
                     G       +  E       +SP G++IA          I + +     + 
Sbjct: 237 GTVCVWGAITGRQVGAAHRGHEDIVSAVAYSPNGEVIASASKDRT---IRLWEASTGMQI 293

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRK 409
              L     ++ +  +SP G+ L  +  
Sbjct: 294 CGTLTGHTHHVYSVVFSPDGKRLASASN 321



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 62/199 (31%), Gaps = 41/199 (20%)

Query: 113 TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAH-TISDD---- 161
              V      R           RLWDV   +++   +    P+   ++ H T S D    
Sbjct: 562 VTSVSFSPDGRYLASGSFDCTVRLWDVGTGQRVGAVRR--EPSDVHRVHHVTFSPDGKHV 619

Query: 162 ----------IYQSITGEKG-------DFNSRILFVSESV-----VSGIIKNSLCVMDR- 198
                     I+ +    +G         +  I  V+ S       +G   +++ V D  
Sbjct: 620 LSGSDYGSLRIWTAAVKTQGRVGTAFSGHSGTITVVAYSPDGKLLATGSEDHTVRVWDAM 679

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKRIGNFR 257
            G  +          +    FSP+  +V     D      + + DT   +     +    
Sbjct: 680 TGHPVVDAQTGHAAAITYVSFSPDGGRVISCANDG----TIRVWDTMTGKQIGSALRGHY 735

Query: 258 SMILAPRFSSNGKRALISV 276
           + + +  F+ +G+  + S 
Sbjct: 736 AAVDSVAFAPDGRHVVSSA 754


>gi|256787828|ref|ZP_05526259.1| protease [Streptomyces lividans TK24]
          Length = 1047

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 92/254 (36%), Gaps = 24/254 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +   DG    +   + +  +  PR SP+  KVA+ +  D     V++         K
Sbjct: 9   DVWLAPLDGGRA-WRVSADNVPVNHPRISPDGTKVAWTSTRDG-APEVHVAPVE-GGPAK 65

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTNTLFINI-- 305
           R+ ++ S+    R ++++G+   +S             ++ L       L      ++  
Sbjct: 66  RLTHWGSIRTQVRGWTADGRVLALSTYGQASLRRSWARALPLDGGPATTLPYGPVGDVAQ 125

Query: 306 SASY----SPDSSQIVFE-SDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                   +P   +  +    R G   +L++ + +  +  R+    + +   P W   GD
Sbjct: 126 GPHTVLLSAPMGREAAWWKRYRGGTAGKLWIDREDDGEFVRLHDGLDGNIEYPFWV--GD 183

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAF        A+     DGS  R         A   +  G  ++++         +L+
Sbjct: 184 RIAFLSDHEGTGALYSSLADGSDLRRHTPVDGFYARHAATDGSRVVYAS------AGELW 237

Query: 420 SI-DLNGRNETLIN 432
           ++ DL+G     ++
Sbjct: 238 TLDDLDGAEPRRLD 251



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 78/212 (36%), Gaps = 19/212 (8%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V+L      RA +   +   +   PR S +G +   +  +D A +++   ++    +RLT
Sbjct: 10  VWLAPLDGGRAWRVSADNVPVN-HPRISPDGTKVAWTSTRDGAPEVHVAPVEGGPAKRLT 68

Query: 299 NTLFINISAS-YSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDK-----EASY 349
           +   I      ++ D   +   +  +   +      +  +G     +         +  +
Sbjct: 69  HWGSIRTQVRGWTADGRVLALSTYGQASLRRSWARALPLDGGPATTLPYGPVGDVAQGPH 128

Query: 350 FDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
              + +P G   A+ K    G    + + ++D  +   L +  D N++ P W   G  + 
Sbjct: 129 TVLLSAPMGREAAWWKRYRGGTAGKLWIDREDDGEFVRLHDGLDGNIEYPFWV--GDRIA 186

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           F    +G     LYS   +G +    +TP   
Sbjct: 187 FLSDHEGTGA--LYSSLADGSDLRR-HTPVDG 215



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 20/188 (10%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
               + + D    ++   L      R++           SPD +++ + S R+G  +++V
Sbjct: 1   MVAFTAEDD----VWLAPLDGGRAWRVSADNVPVNHPRISPDGTKVAWTSTRDGAPEVHV 56

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERLL- 386
               G   KR++           W+  G ++A + +            +  DG     L 
Sbjct: 57  APVEGGPAKRLTHWGSIRTQVRGWTADGRVLALSTYGQASLRRSWARALPLDGGPATTLP 116

Query: 387 -------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNETL-INTPAY 436
                   +  +    + +P GR   + ++  G T  KL+ ID   +G    L       
Sbjct: 117 YGPVGDVAQGPHTVLLS-APMGREAAWWKRYRGGTAGKLW-IDREDDGEFVRLHDGLDGN 174

Query: 437 ASDPQWVG 444
              P WVG
Sbjct: 175 IEYPFWVG 182



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 94/306 (30%), Gaps = 25/306 (8%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYL--------T 207
           +++D            F +R      S V       L  +D  DGA  R L         
Sbjct: 200 SLADGSDLRRHTPVDGFYARHAATDGSRVVYASAGELWTLDDLDGAEPRRLDIRLGGARV 259

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPR-F 265
             +   +   R+  +      A      +       T      + +     +    PR F
Sbjct: 260 DLQSYPVNAARWFGSASPDHTARGSAVAVRGGVHWVTHRSGPARALAATPGVRTRLPRTF 319

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSN-----ATERLTNT-LFINISASYSPDSSQIVFE 319
             +G+  ++ V   E  D       +         RL    L   +  + +PD S++   
Sbjct: 320 RVDGEEWVVWVTDAEGDDALEFAPATGLAPGATARRLAAGQLGRVLHLAVAPDGSRVAVA 379

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKK 378
           S      ++ +++    + + + + ++      V+SP    +A++    E    + +   
Sbjct: 380 SH---DGRVLLVERESGEVREVDRSEDGDASGLVFSPDSSWLAWSHPGPEPLRQLKLANT 436

Query: 379 -DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLINTP 434
            D S            +P ++  G+ L F   +  D     +  DL    G    LI   
Sbjct: 437 TDLSVSEATPLRFKDYSPAFTLDGKHLAFLSTRSFDPVYDEHVFDLAFVEGARPYLITLA 496

Query: 435 AYASDP 440
           A    P
Sbjct: 497 ATTPSP 502



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 101/254 (39%), Gaps = 36/254 (14%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---- 230
            RI F+S+   +G + +SL     DG+++R  TP             +  +V YA+    
Sbjct: 183 DRIAFLSDHEGTGALYSSL----ADGSDLRRHTPVDGFYARHAA--TDGSRVVYASAGEL 236

Query: 231 --YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----SSNG--KRALISVQKDEAM 282
              DD D      +D R+  A   + ++   + A R+    S +   + + ++V+     
Sbjct: 237 WTLDDLDGAEPRRLDIRLGGARVDLQSYP--VNAARWFGSASPDHTARGSAVAVRGG--- 291

Query: 283 DIYSVDLQSNATERLTNTLFINISA--SYSPDSS-QIVFESDREGKEQLYVMQS----NG 335
            ++ V  +S     L  T  +      ++  D    +V+ +D EG + L    +     G
Sbjct: 292 -VHWVTHRSGPARALAATPGVRTRLPRTFRVDGEEWVVWVTDAEGDDALEFAPATGLAPG 350

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQ 393
           +  +R++  +         +P G  +A     G    + +++++  + R +   ED +  
Sbjct: 351 ATARRLAAGQLGRVLHLAVAPDGSRVAVASHDG---RVLLVERESGEVREVDRSEDGDAS 407

Query: 394 APTWSPSGRSLIFS 407
              +SP    L +S
Sbjct: 408 GLVFSPDSSWLAWS 421


>gi|73668269|ref|YP_304284.1| hypothetical protein Mbar_A0726 [Methanosarcina barkeri str.
           Fusaro]
 gi|72395431|gb|AAZ69704.1| hypothetical protein Mbar_A0726 [Methanosarcina barkeri str.
           Fusaro]
          Length = 560

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 81/232 (34%), Gaps = 12/232 (5%)

Query: 219 FSPN--QQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +S +    K+ + T    D+  +Y +    I    +++         P     G + +  
Sbjct: 183 WSSSICGDKMVWTTCPYGDLSDLYDVCMYDISTKTEKMITDNGYSYYPAIY--GNKIVWV 240

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             ++   D+Y  D+ +    ++TN     +  +      +IV+   R     +Y+   + 
Sbjct: 241 DYRNGYTDVYMYDISTKKETQITNNESEKMCPAIY--GDKIVWMDSRNENWDIYMYDLST 298

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
             + +I+     S +  ++   GD I +       + + V      QE    + S+    
Sbjct: 299 KKETQITTGPSDSLYPAIY---GDRIVWNNNRKGNWDVYVYDLATGQEWHTTDKSDQYYS 355

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
                G  ++++  ++G+    +  +  +        +P     P  V F D
Sbjct: 356 AI--YGDRIVWTDMRNGNPDIYMGILSKSSPVAAFSASPTTGKAPLNVAFTD 405



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 67/176 (38%), Gaps = 20/176 (11%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------- 322
            R +    ++   DIY  DL +    ++T  +    S       +++V+  +R       
Sbjct: 99  NRIVWYDNRNGNWDIYMYDLSTKKETQITTNVSDQYSPYIY--GNRVVWVDERNRNPEDF 156

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMKK 378
            G   +Y+   +   + +I+ ++   +     S  GD + +T          + + +   
Sbjct: 157 SGNSDIYMYDLSTKKETQITNNEGYLWSS---SICGDKMVWTTCPYGDLSDLYDVCMYDI 213

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               E+++ ++     P     G  +++   ++G T   +Y  D++ + ET I   
Sbjct: 214 STKTEKMITDNGYSYYPAI--YGNKIVWVDYRNGYT--DVYMYDISTKKETQITNN 265



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 86/233 (36%), Gaps = 26/233 (11%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             +C+ D      + +T   +   + P       K+ +  Y +     VY+ D    +  
Sbjct: 206 YDVCMYDISTKTEKMITD--NGYSYYPAIY--GNKIVWVDYRNG-YTDVYMYDIST-KKE 259

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            +I N  S  + P     G + +    ++E  DIY  DL +    ++T     ++  +  
Sbjct: 260 TQITNNESEKMCPAIY--GDKIVWMDSRNENWDIYMYDLSTKKETQITTGPSDSLYPAIY 317

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
               +IV+ ++R+G   +YV       +   +   +  Y        GD I +T      
Sbjct: 318 --GDRIVWNNNRKGNWDVYVYDLATGQEWHTTDKSDQYYSAIY----GDRIVWTDMRNGN 371

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSP-SGRS---LIFSRKKDGDTGSKLY 419
             I +         +L + S + A + SP +G++   + F+    G   S  +
Sbjct: 372 PDIYMG--------ILSKSSPVAAFSASPTTGKAPLNVAFTDTSTGSPTSWFW 416



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 78/217 (35%), Gaps = 24/217 (11%)

Query: 223 QQKVAYATYDDEDI------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +V +    + +         +Y+ D    +   +I N    + +      G + + + 
Sbjct: 140 GNRVVWVDERNRNPEDFSGNSDIYMYDLST-KKETQITNNEGYLWSSSIC--GDKMVWTT 196

Query: 277 QKDEA----MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                     D+   D+ +   + +T+  +    A Y    ++IV+   R G   +Y+  
Sbjct: 197 CPYGDLSDLYDVCMYDISTKTEKMITDNGYSYYPAIY---GNKIVWVDYRNGYTDVYMYD 253

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSN 391
            +   + +I+ ++       ++   GD I +     E + I +      +E ++    S+
Sbjct: 254 ISTKKETQITNNESEKMCPAIY---GDKIVWMDSRNENWDIYMYDLSTKKETQITTGPSD 310

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              P     G  ++++  + G+    +Y  DL    E
Sbjct: 311 SLYPAI--YGDRIVWNNNRKGNW--DVYVYDLATGQE 343


>gi|299739162|ref|XP_001835095.2| WD-repeat-containing protein [Coprinopsis cinerea okayama7#130]
 gi|298403650|gb|EAU86737.2| WD-repeat-containing protein [Coprinopsis cinerea okayama7#130]
          Length = 1292

 Score = 80.1 bits (196), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 84/294 (28%), Gaps = 38/294 (12%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        RLW  +  + ++G                        + G  G  +  
Sbjct: 908  TTIASGSYDCSVRLWSTQSGEPVLG-----------------------PLKGHTGPISVA 944

Query: 177  ILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                  ++ SG    S+ +   + G  +         ++    F P+   +A  + D   
Sbjct: 945  FSPDGTTIASGSADCSVQLWSTQSGEPVLGPLEGHTGVVTSVAFYPDGTTIASGSSDG-- 1002

Query: 236  ILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               V+L  T+        +G    ++ +  FS +G     S   D  + ++S        
Sbjct: 1003 --SVWLWSTQSGEPVLGPLGEHTDLVSSVAFSPDGTTIA-SGSWDGLVRLWSTQSGQPVL 1059

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM---QSNGSDQKRISQDKEASYFD 351
              L        S ++SPD + I       G     V      +G       +    S   
Sbjct: 1060 GPLEGHTGAVTSVAFSPDGTTIA-----SGSYDCSVWLWSTQSGQPVLGPLEGHTGSVNS 1114

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              +SP G  IA        +  G    +     L      + +  +SP G ++ 
Sbjct: 1115 VAFSPDGTTIASGSADCSVWLWGTQSGEPVLGPLEGHTDTVTSVVFSPDGTTIA 1168



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 76/234 (32%), Gaps = 18/234 (7%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
             L      G  +          +    FSP+   +A  +YD      V+L  T+  +   
Sbjct: 1048 RLWSTQS-GQPVLGPLEGHTGAVTSVAFSPDGTTIASGSYD----CSVWLWSTQSGQPVL 1102

Query: 252  -RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              +      + +  FS +G     S   D ++ ++           L        S  +S
Sbjct: 1103 GPLEGHTGSVNSVAFSPDGTTIA-SGSADCSVWLWGTQSGEPVLGPLEGHTDTVTSVVFS 1161

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            PD + I   S  +   +L+    +G       +    S     +SP G  IA   +    
Sbjct: 1162 PDGTTIASGS-ADCSVRLWST-QSGEPVLGPLEGHTGSVTLVAFSPDGTTIASGSYD--- 1216

Query: 371  FAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             ++ +      +     L      + +  +SP G +  F+    GD   +L+S 
Sbjct: 1217 CSVRLWSTQSGEPVLGPLEGHTGAVTSVAFSPDGTT--FASG-SGDCSVRLWST 1267



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 65/193 (33%), Gaps = 17/193 (8%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+   +A  +YD      V L  T+            +  ++  FS +G     S  
Sbjct: 902  AFSPDGTTIASGSYD----CSVRLWSTQSGEPVLGPLKGHTGPISVAFSPDGTTIA-SGS 956

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D ++ ++S          L     +  S ++ PD + I   S       +++  +   +
Sbjct: 957  ADCSVQLWSTQSGEPVLGPLEGHTGVVTSVAFYPDGTTIASGSS---DGSVWLWSTQSGE 1013

Query: 338  QKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNL 392
               +    E +       +SP G  IA   + G    + +      Q     L      +
Sbjct: 1014 PV-LGPLGEHTDLVSSVAFSPDGTTIASGSWDG---LVRLWSTQSGQPVLGPLEGHTGAV 1069

Query: 393  QAPTWSPSGRSLI 405
             +  +SP G ++ 
Sbjct: 1070 TSVAFSPDGTTIA 1082



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 57/206 (27%), Gaps = 29/206 (14%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                         LW  +  + ++G              HT S  +        G     
Sbjct: 1079 TTIASGSYDCSVWLWSTQSGQPVLG----------PLEGHTGS--VNSVAFSPDG----- 1121

Query: 177  ILFVSESVVSGIIKNSLCVM-DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                  ++ SG    S+ +   + G  +          +    FSP+   +A  + D   
Sbjct: 1122 -----TTIASGSADCSVWLWGTQSGEPVLGPLEGHTDTVTSVVFSPDGTTIASGSAD--- 1173

Query: 236  ILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               V L  T+        +      +    FS +G     S   D ++ ++S        
Sbjct: 1174 -CSVRLWSTQSGEPVLGPLEGHTGSVTLVAFSPDGTTIA-SGSYDCSVRLWSTQSGEPVL 1231

Query: 295  ERLTNTLFINISASYSPDSSQIVFES 320
              L        S ++SPD +     S
Sbjct: 1232 GPLEGHTGAVTSVAFSPDGTTFASGS 1257



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 10/149 (6%)

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + +  FS +G     S   D ++ ++S          L       IS ++SPD + I   
Sbjct: 898  VTSVAFSPDGTTIA-SGSYDCSVRLWSTQSGEPVLGPLKGHTGP-ISVAFSPDGTTIASG 955

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            S  +   QL+    +G       +          + P G  IA     G    + +    
Sbjct: 956  S-ADCSVQLWST-QSGEPVLGPLEGHTGVVTSVAFYPDGTTIASGSSDGS---VWLWSTQ 1010

Query: 380  GSQERLLV---EDSNLQAPTWSPSGRSLI 405
              +  L         + +  +SP G ++ 
Sbjct: 1011 SGEPVLGPLGEHTDLVSSVAFSPDGTTIA 1039


>gi|256379516|ref|YP_003103176.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Actinosynnema mirum DSM 43827]
 gi|255923819|gb|ACU39330.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Actinosynnema mirum DSM 43827]
          Length = 634

 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 44/296 (14%), Positives = 96/296 (32%), Gaps = 61/296 (20%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   + SL  +  DG+  R  T    +    PR SP+ + VA+             +   
Sbjct: 33  TNTYRGSLHRLPLDGSGARQWTW--AERDSAPRISPDGRWVAFLRVTGSGKPPQVHVMAA 90

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------------------- 277
                +R+ +      AP +S +  R   + +                            
Sbjct: 91  DGGDARRVTDAPLGAGAPVWSPDSTRLAYTARVPEPGRYGSEVDGVAPGPDAEAPRHITR 150

Query: 278 -----------KDEAMDIYSVD--LQSNATERLTNTLFINISASYSPDSSQIVFESDRE- 323
                       D    ++ VD  +       LT+      + +++ D +++VF + R+ 
Sbjct: 151 LDYRVDDLGFTGDRRPRLFVVDALVAGADPVELTDGSHDLGAPAWTADGTRLVFSAPRDL 210

Query: 324 -----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIG 374
                 ++ LY + + G     +      +  DPV    G ++ +     + SG    +G
Sbjct: 211 DAVETHQDDLYSVPAEGGAAPELLVRAPGAAGDPVPLADGGVLFYGLDNPEDSGVARNLG 270

Query: 375 VMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +    G + R L +      +    AP  +  G  ++ + +  G    +   +D +
Sbjct: 271 LWLARGDELRRLTDVETVDCEKAAGAPVVTGDG--VLVAVRNRGAVELRRVPLDAD 324



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 7/103 (6%)

Query: 349 YFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                 S +GDL+       +      + ++  +  DGS  R         AP  SP GR
Sbjct: 10  DLPGSLSVRGDLVLVNTARPDAETNTYRGSLHRLPLDGSGARQWTWAERDSAPRISPDGR 69

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
            + F R        +++ +  +G +   +   P  A  P W  
Sbjct: 70  WVAFLRVTGSGKPPQVHVMAADGGDARRVTDAPLGAGAPVWSP 112


>gi|218440521|ref|YP_002378850.1| hypothetical protein PCC7424_3594 [Cyanothece sp. PCC 7424]
 gi|218173249|gb|ACK71982.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 1164

 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 94/255 (36%), Gaps = 31/255 (12%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D    +      + I++    SP+ + +A A+ D      V L + ++      +     
Sbjct: 545 DQITEKNRFKGHEDIVYSASLSPDGKLIASASKDG----TVKLWN-QVGEQLAILRGHEG 599

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            I    FS +G+    +   DE   ++S D        L        + ++SPD   I  
Sbjct: 600 AIYGVSFSPDGQYIA-TASSDETAKLWSSD--GKEIATLKGHQGSVYNVTFSPDGQYIAT 656

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S R+   +L+   +    Q  + +    S  D  ++ +GD IA     G    + +   
Sbjct: 657 TS-RDNTARLW---NKKGQQIAVLKGHTQSVDDISFNAKGDRIATASRDGT---VKLWDI 709

Query: 379 DG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY------SIDLNGRNET 429
            G      R   +D    +  +SP G+ +  +   D +   K++       + + G ++ 
Sbjct: 710 KGILLGNVR--SDDVAFYSVDFSPDGK-IAIA---DSEGVVKVWDEKGNLMVTIKG-HQD 762

Query: 430 LINTPAYASDPQWVG 444
            IN   ++ + +W+ 
Sbjct: 763 FINRVRFSPNGKWIA 777



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 72/380 (18%), Positives = 133/380 (35%), Gaps = 59/380 (15%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
            IS ++   +I         + W+  G    + G V  +      V F   D     +I  
Sbjct: 686  ISFNAKGDRIATASRDGTVKLWDIKGI---LLGNVRSD-----DVAFYSVDFSPDGKIAI 737

Query: 142  KKFFSSPASWRKIAHTISDDIYQSITGEKG--DFNSRILFVSESVVSGIIKNSLCVMDRD 199
                     W        D+    +   KG  DF +R+ F      +G     +     D
Sbjct: 738  ADSEGVVKVW--------DEKGNLMVTIKGHQDFINRVRF----SPNGKW---IATASSD 782

Query: 200  G----ANIR----YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            G     N++           + +++  +S + Q++  A+ D      V L +   D+   
Sbjct: 783  GVAKLWNLQGKEFITFKGHQEAIYDIAWSSDGQELVTASGDG----TVKLWEIN-DQNLT 837

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            R  + +  I +  FS NG   L+    +  +++   DL+ N  ++  + L       +S 
Sbjct: 838  RNSDLQRRITSVSFSPNG-ELLVRSSINGEIELS--DLEGNLKQQFDSGLDWISDLKFSA 894

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            DS +IV  S R G  +L+          +   +K  ++     S  G  +A     G   
Sbjct: 895  DSQKIVAVS-RGGMIRLW---ERKGRVLKEWPEKYNNFSSVALSQDGKKLATADREG--- 947

Query: 372  AIGVMKKDGSQERLLVEDSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             + +     +  +LL + S       + ++SP G  +I +   D     KL+  D  G  
Sbjct: 948  QVWIWDLTNNVPKLLTKFSAHKDVINSISFSPDGEEIITASSDD---SVKLW--DSQGNL 1002

Query: 428  ETLINTPAYASDPQWVGFMD 447
            +T       A    WV F +
Sbjct: 1003 KTQFKGHKEAVY--WVSFSN 1020



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 60/304 (19%), Positives = 124/304 (40%), Gaps = 42/304 (13%)

Query: 130  LWDVK---DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-- 184
            ++D+    D ++++      +   W         +I         D   RI  VS S   
Sbjct: 805  IYDIAWSSDGQELVTASGDGTVKLW---------EINDQNLTRNSDLQRRITSVSFSPNG 855

Query: 185  ---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
               V   I   + + D +G N++    S    + + +FS + QK+   +     ++R++ 
Sbjct: 856  ELLVRSSINGEIELSDLEG-NLKQQFDSGLDWISDLKFSADSQKIVAVS--RGGMIRLWE 912

Query: 242  MDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
               R+ +  P++  NF S+      S +GK+   +  ++  + I+  DL +N  + LT  
Sbjct: 913  RKGRVLKEWPEKYNNFSSV----ALSQDGKKLA-TADREGQVWIW--DLTNNVPKLLTKF 965

Query: 301  LFINI---SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                    S S+SPD  +I+  S     + + +  S G+ + +    KEA Y+   +S  
Sbjct: 966  SAHKDVINSISFSPDGEEIITASS---DDSVKLWDSQGNLKTQFKGHKEAVYWV-SFSND 1021

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G+ I      G      +  ++G   ++L  D   +   ++SP+G+ +        D  +
Sbjct: 1022 GNYIGTASKDGTA---RLWNREGETIKVLQGDLFPVYRVSFSPNGKYIA---TGSSDGTA 1075

Query: 417  KLYS 420
            +L+ 
Sbjct: 1076 RLWD 1079



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 110/298 (36%), Gaps = 42/298 (14%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R   H   D +Y +     G          + + S     ++ + ++ G  +  +    +
Sbjct: 552 RFKGHE--DIVYSASLSPDG----------KLIASASKDGTVKLWNQVGEQLA-ILRGHE 598

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             ++   FSP+ Q +A A+ D+   L      +   +    +   +  +    FS +G+ 
Sbjct: 599 GAIYGVSFSPDGQYIATASSDETAKLW-----SSDGKEIATLKGHQGSVYNVTFSPDGQY 653

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              +  +D    ++  + +      L          S++    +I   + R+G  +L+  
Sbjct: 654 IA-TTSRDNTARLW--NKKGQQIAVLKGHTQSVDDISFNAKGDRIA-TASRDGTVKLW-- 707

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDS 390
              G     +  D + +++   +SP G  IA     G    + V  + G+    +     
Sbjct: 708 DIKGILLGNVRSD-DVAFYSVDFSPDGK-IAIADSEG---VVKVWDEKGNLMVTIKGHQD 762

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-------NETLINTPAYASDPQ 441
            +    +SP+G+ +  +     D  +KL+  +L G+       ++  I   A++SD Q
Sbjct: 763 FINRVRFSPNGKWIATASS---DGVAKLW--NLQGKEFITFKGHQEAIYDIAWSSDGQ 815



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 55/330 (16%), Positives = 117/330 (35%), Gaps = 44/330 (13%)

Query: 102  DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR---------KQIIGKKFFSSPASWR 152
             W+S G ++     V   G   ++    LW++ D+         ++I    F  +     
Sbjct: 809  AWSSDGQEL-----VTASGDGTVK----LWEINDQNLTRNSDLQRRITSVSFSPNGELLV 859

Query: 153  KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
            + +     ++       K  F+S + ++S+   S   +  + V    G  IR        
Sbjct: 860  RSSINGEIELSDLEGNLKQQFDSGLDWISDLKFSADSQKIVAVSR--GGMIRLWERKGRV 917

Query: 213  ILFEP---------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            +   P           S + +K+A  T D E  + ++ +   + +   +    + +I + 
Sbjct: 918  LKEWPEKYNNFSSVALSQDGKKLA--TADREGQVWIWDLTNNVPKLLTKFSAHKDVINSI 975

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             FS +G+   I+   D+++ ++  D Q N   +           S+S D + I   + ++
Sbjct: 976  SFSPDGEEI-ITASSDDSVKLW--DSQGNLKTQFKGHKEAVYWVSFSNDGNYIG-TASKD 1031

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            G  +L+     G   K +  D     +   +SP G  IA     G      +    G   
Sbjct: 1032 GTARLW--NREGETIKVLQGDLF-PVYRVSFSPNGKYIATGSSDGTA---RLWDNQG-NL 1084

Query: 384  RLLVEDSNLQAP--TWSPSGRSLIFSRKKD 411
            R   +         T+SP  +++    +  
Sbjct: 1085 RAEFKGHQDSIYGITFSPDSKTVTTVSRDG 1114


>gi|56752090|ref|YP_172791.1| hypothetical protein syc2081_d [Synechococcus elongatus PCC 6301]
 gi|81300823|ref|YP_401031.1| hypothetical protein Synpcc7942_2014 [Synechococcus elongatus PCC
           7942]
 gi|56687049|dbj|BAD80271.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81169704|gb|ABB58044.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 197

 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 3/126 (2%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSP 311
           N R     P  S +G+      ++D    IY  DLQ    + L    +   I  S S S 
Sbjct: 47  NSRYSESQPALSGDGRYLAYVAERDGHRTIYLYDLQRRQLQPLPGFADRDAIAESPSLSW 106

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
               I +     G+ ++ V       ++ ++Q        P  SP G L+AF      ++
Sbjct: 107 TGRYIAYVGSDRGRPEIQVYDRATQRREVLTQGWRGWVRQPSISPDGRLVAFESSRRGQW 166

Query: 372 AIGVMK 377
            I +  
Sbjct: 167 DIELFD 172



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 56/145 (38%), Gaps = 8/145 (5%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           N+ +     + S D   + + ++R+G   +Y+        + +    D++A    P  S 
Sbjct: 47  NSRYSESQPALSGDGRYLAYVAERDGHRTIYLYDLQRRQLQPLPGFADRDAIAESPSLSW 106

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDT 414
            G  IA+      +  I V  +   +  +L +        P+ SP GR + F   + G  
Sbjct: 107 TGRYIAYVGSDRGRPEIQVYDRATQRREVLTQGWRGWVRQPSISPDGRLVAFESSRRGQW 166

Query: 415 GSKLYSIDLNGRNETLINTPAYASD 439
             +L+    +    T ++ P  + +
Sbjct: 167 DIELF----DRGELTELDRPEGSRE 187



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 53/160 (33%), Gaps = 5/160 (3%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           GA +     +      +P  S + + +AY    D     +YL D +  +     G     
Sbjct: 38  GAVVVTPNLNSRYSESQPALSGDGRYLAYVAERDGH-RTIYLYDLQRRQLQPLPGFADRD 96

Query: 260 ILA--PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQI 316
            +A  P  S  G+            +I   D  +   E LT          S SPD   +
Sbjct: 97  AIAESPSLSWTGRYIAYVGSDRGRPEIQVYDRATQRREVLTQGWRGWVRQPSISPDGRLV 156

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            FES R G+  + +    G   +    +       P+ SP
Sbjct: 157 AFESSRRGQWDIELFDR-GELTELDRPEGSRESSAPIASP 195



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 36/116 (31%), Gaps = 14/116 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTP-------------SRDQILFEPRFSPNQQKVAYATYD 232
           SG  +    V +RDG    YL                RD I   P  S   + +AY   D
Sbjct: 58  SGDGRYLAYVAERDGHRTIYLYDLQRRQLQPLPGFADRDAIAESPSLSWTGRYIAYVGSD 117

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                 + + D    R       +R  +  P  S +G+       +    DI   D
Sbjct: 118 RGRP-EIQVYDRATQRREVLTQGWRGWVRQPSISPDGRLVAFESSRRGQWDIELFD 172



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 32/103 (31%), Gaps = 6/103 (5%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--- 400
           +   S   P  S  G  +A+         I +      Q + L   ++  A   SPS   
Sbjct: 47  NSRYSESQPALSGDGRYLAYVAERDGHRTIYLYDLQRRQLQPLPGFADRDAIAESPSLSW 106

Query: 401 -GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQ 441
            GR + +     G    ++Y      R E L      +   P 
Sbjct: 107 TGRYIAYVGSDRGRPEIQVYD-RATQRREVLTQGWRGWVRQPS 148


>gi|116624299|ref|YP_826455.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227461|gb|ABJ86170.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 931

 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 90/256 (35%), Gaps = 21/256 (8%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V   D    R     + Q L    +S   +++ +   ++ ++  +Y +      A + + 
Sbjct: 568 VAVVDLQGHRRTLTRKFQCLQGLAWSLGGKEIWFTGCNEGNLASIYAVTL--SGALRLVA 625

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              + +     + +G+  L   + D   ++Y +    +    LT  L   +S   S D  
Sbjct: 626 QVPADLRIQDIAPDGRLLL--TRTDLRANVYFLGAGESEPHDLT-WLDWALSPVLSADGK 682

Query: 315 QIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +++     +   GK  LY+  ++GS   R+             SP G   A      E+ 
Sbjct: 683 RVLMTESGAGTGGKAVLYLRGTDGSPAVRL----GDQLSGHALSPDGLWAAARSDDQERL 738

Query: 372 AIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            I ++     +   L   S   AP         W P  R ++F+  + G    + Y  D+
Sbjct: 739 RIVLLPVKAGKPVWLETGSLEVAPNLGDRTNIAWLPDSRRILFAAAEPGHFV-RTYVQDI 797

Query: 424 NGRNETLINTPAYASD 439
           NG +   +     +  
Sbjct: 798 NGGSPRPVTPEGISGS 813



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 94/248 (37%), Gaps = 33/248 (13%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
              R  ++   RF+P+ + V YA   +   + ++ M      + + +G   + +L+   S
Sbjct: 402 LTFRRGLVQGARFAPDGRSVIYAATFEGQAVELFSMQPGSPESSRPLGFSSTGVLS--IS 459

Query: 267 SNGKRAL-----ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
             G+ A+     I    D    +    +   A   +   L    SA + PD  Q+     
Sbjct: 460 RTGEMAVSSNCRIDFWGDCVGTLAQKPVAGGAPREI---LGNVRSADWMPDGKQLAVS-- 514

Query: 322 REGKEQLYVMQSNGSDQKRISQD---------KEASYFDPVWSPQGDLIAF--TKFSGEK 370
                    M++    ++R+                  DP  SP GDL+AF    + G  
Sbjct: 515 ---------MRAANGKRERLEFPIGKVLFEASGTGWAGDPRVSPGGDLVAFADHYYFGND 565

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            ++ V+   G +  L  +   LQ   WS  G+ + F+   +G+  S +Y++ L+G    +
Sbjct: 566 GSVAVVDLQGHRRTLTRKFQCLQGLAWSLGGKEIWFTGCNEGNLAS-IYAVTLSGALRLV 624

Query: 431 INTPAYAS 438
              PA   
Sbjct: 625 AQVPADLR 632



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/264 (16%), Positives = 92/264 (34%), Gaps = 34/264 (12%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + + + ++ES      K  L +   DG+    L             SP+    A A  DD
Sbjct: 680 DGKRVLMTESGAGTGGKAVLYLRGTDGSPAVRLGDQLSGHAL----SPDGLWAA-ARSDD 734

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAP--------RFSSNGKRALISVQKDEAM-DI 284
           ++ LR+ L+  +  +         S+ +AP         +  + +R L +  +       
Sbjct: 735 QERLRIVLLPVKAGKPVWLET--GSLEVAPNLGDRTNIAWLPDSRRILFAAAEPGHFVRT 792

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQ 343
           Y  D+   +   +T    I+ S   S D + +   +S+     + ++    G   K +  
Sbjct: 793 YVQDINGGSPRPVT-PEGISGS-VLSVDGTSLLALDSE----AKAFLYPLGGGTPKPL-P 845

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-------DSNLQAPT 396
                     +S     I   + S     +  +     +  L  E        + + +  
Sbjct: 846 VLTTDERLMSFSEDARSIFVARRSERLAKVWRVDLSSGRMELWRELPIDPAGQTRVNSVQ 905

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYS 420
            +P G+SL+++  ++    S+LY 
Sbjct: 906 ITPDGKSLVYAVVRN---SSELYL 926



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 55/187 (29%), Gaps = 45/187 (24%)

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKR-------- 340
           ++ + ERLT    +   A ++PD   +++ +  EG+  +L+ MQ    +  R        
Sbjct: 395 ETASFERLTFRRGLVQGARFAPDGRSVIYAATFEGQAVELFSMQPGSPESSRPLGFSSTG 454

Query: 341 ---ISQDKE---------------------------------ASYFDPVWSPQGDLIAFT 364
              IS+  E                                  +     W P G  +A +
Sbjct: 455 VLSISRTGEMAVSSNCRIDFWGDCVGTLAQKPVAGGAPREILGNVRSADWMPDGKQLAVS 514

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +       +    G              P  SP G  + F+          +  +DL 
Sbjct: 515 MRAANGKRERLEFPIGKVLFEASGTGWAGDPRVSPGGDLVAFADHYYFGNDGSVAVVDLQ 574

Query: 425 GRNETLI 431
           G   TL 
Sbjct: 575 GHRRTLT 581


>gi|332163514|ref|YP_004300091.1| hypothetical protein YE105_C3894 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318608017|emb|CBY29515.1| uncharacterized protein YidR [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325667744|gb|ADZ44388.1| hypothetical protein YE105_C3894 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330861737|emb|CBX71911.1| uncharacterized protein yidR [Yersinia enterocolitica W22703]
          Length = 433

 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 20/160 (12%)

Query: 279 DEAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQL 328
           +                RLT T       +  S   +   SPD S I     D EG  QL
Sbjct: 280 EGTQTTMPAPPAGVRQRRLTFTAERRFPGLATSPRHWLRTSPDGSAIACLMKDDEGVVQL 339

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++  NG + ++++  +        W PQG  +AF   +    ++        Q R L  
Sbjct: 340 WLVSPNGGEPRQLTFTEGGIQSAFSWHPQGHSLAFVCDN----SVMQCDSTTGQLRRLTA 395

Query: 389 DSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            S +     A  +SP G  + F R+ DG   ++++++ ++
Sbjct: 396 RSAIAPMADAVVFSPDGTKVAFMREIDG--LAQIFTVKVD 433



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 11/134 (8%)

Query: 208 PSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                +   PR     SP+   +A    DDE +++++L+        +       +  A 
Sbjct: 304 RRFPGLATSPRHWLRTSPDGSAIACLMKDDEGVVQLWLVSPNGGEPRQLTFTEGGIQSAF 363

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFES 320
            +   G              +   D  +    RLT    I   A    +SPD +++ F  
Sbjct: 364 SWHPQGHSLAFVCDNS----VMQCDSTTGQLRRLTARSAIAPMADAVVFSPDGTKVAFMR 419

Query: 321 DREGKEQLYVMQSN 334
           + +G  Q++ ++ +
Sbjct: 420 EIDGLAQIFTVKVD 433



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 47/139 (33%), Gaps = 15/139 (10%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASY-----FDPVW---SPQGDLIA-FTKFSGEKFAI 373
           EG +        G  Q+R++   E  +         W   SP G  IA   K       +
Sbjct: 280 EGTQTTMPAPPAGVRQRRLTFTAERRFPGLATSPRHWLRTSPDGSAIACLMKDDEGVVQL 339

Query: 374 GVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRN 427
            ++  +G + R L   E     A +W P G SL F           T  +L  +      
Sbjct: 340 WLVSPNGGEPRQLTFTEGGIQSAFSWHPQGHSLAFVCDNSVMQCDSTTGQLRRLTARSAI 399

Query: 428 ETLINTPAYASDPQWVGFM 446
             + +   ++ D   V FM
Sbjct: 400 APMADAVVFSPDGTKVAFM 418



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 7/101 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++  +G   R LT +   I     + P    +A+   +      V   D+   +  +
Sbjct: 338 QLWLVSPNGGEPRQLTFTEGGIQSAFSWHPQGHSLAFVCDN-----SVMQCDSTTGQLRR 392

Query: 252 RIGNF--RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                    M  A  FS +G +     + D    I++V + 
Sbjct: 393 LTARSAIAPMADAVVFSPDGTKVAFMREIDGLAQIFTVKVD 433


>gi|209522640|ref|ZP_03271198.1| WD-40 repeat protein [Arthrospira maxima CS-328]
 gi|209496689|gb|EDZ96986.1| WD-40 repeat protein [Arthrospira maxima CS-328]
          Length = 1194

 Score = 80.1 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 61/301 (20%), Positives = 115/301 (38%), Gaps = 43/301 (14%)

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           K+ + + FF +    R +AH   + I++      G          + + +     ++ + 
Sbjct: 552 KETVSRAFFRADEFNRIVAHQ--NLIWRVTFSPDG----------QYIATSSNDRTIRLW 599

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D  G N+  +       +F+  FSP+ Q +A A+ D     +V+ +D         +   
Sbjct: 600 DISG-NLLRVFEGHAGDIFDVAFSPDGQFLASASLD--KTAKVWTLD---GNLVTTLNLH 653

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFIN-ISA-SYSPD 312
            + + A  FS +G+    +  +D+   ++    Q   +A   LT T   + + A ++SPD
Sbjct: 654 ENGVRAIAFSPDGQTIG-TASQDKTAQLWRRGDQGWTDAYLYLTLTGHDDAVEAIAFSPD 712

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              I   S ++   +L+ +           +  +   +D V+SP G  I      G    
Sbjct: 713 GQNIA-TSSKDHTVKLWGID---GSLVNTFRGHQNPVWDVVFSPDGKTIVSGSNDGTA-- 766

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWS-----PSG--RS--LIFSRKKDGDTGSKLYSIDL 423
             V   DGS   L+    + +   WS     P    R   + F+   D     KL+ ID 
Sbjct: 767 -KVWGLDGS---LITTLPSQEGWVWSVAISPPDSIIRRLGIAFAT-ADLANNIKLWDIDG 821

Query: 424 N 424
           N
Sbjct: 822 N 822



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 55/313 (17%), Positives = 111/313 (35%), Gaps = 17/313 (5%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS--ESVVSGIIKNS 192
           D + I       +   WR+     +D           D    I F    +++ +    ++
Sbjct: 665 DGQTIGTASQDKTAQLWRRGDQGWTDAYLYLTLTGHDDAVEAIAFSPDGQNIATSSKDHT 724

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY-LMDTRIDRAPK 251
           + +   DG+ +          +++  FSP+ + +   + D     +V+ L  + I   P 
Sbjct: 725 VKLWGIDGS-LVNTFRGHQNPVWDVVFSPDGKTIVSGSND--GTAKVWGLDGSLITTLPS 781

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           + G   S+ ++P  S   +  +     D A +I   D+  N    L        + S+SP
Sbjct: 782 QEGWVWSVAISPPDSIIRRLGIAFATADLANNIKLWDIDGNLLYTLEGHEQQVWNVSFSP 841

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   +   S+ +   +L+           I +       D V+S   D    T    +  
Sbjct: 842 DGKTLASVSN-DNSLRLWSFDHPSLT---ILRGHNRGILDAVFSED-DSFVVTGSDDKTL 896

Query: 372 AIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            I   + +G   + +   D  + + ++    + L        D   +L+ I  +G N TL
Sbjct: 897 KIW--RPNGELLQTIPTSDGGVLSVSFDYHNQILATGSY---DNIVQLWQISPDGTNITL 951

Query: 431 INTPAYASDPQWV 443
           +NT    + P W 
Sbjct: 952 LNTLTEHTGPVWS 964



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 68/196 (34%), Gaps = 21/196 (10%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           RI   +++I    FS +G+    +   D  + ++  D+  N               ++SP
Sbjct: 567 RIVAHQNLIWRVTFSPDGQYIA-TSSNDRTIRLW--DISGNLLRVFEGHAGDIFDVAFSP 623

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   +   S  +   +++ +     +        E       +SP G  I          
Sbjct: 624 DGQFLASASL-DKTAKVWTLD---GNLVTTLNLHENGVRAIAFSPDGQTIGTASQDKTA- 678

Query: 372 AIGVMKKDGSQ-----ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +      G         L   D  ++A  +SP G+++  S K   D   KL+ ID +  
Sbjct: 679 QLWRRGDQGWTDAYLYLTLTGHDDAVEAIAFSPDGQNIATSSK---DHTVKLWGIDGS-- 733

Query: 427 NETLINTPAYASDPQW 442
              L+NT     +P W
Sbjct: 734 ---LVNTFRGHQNPVW 746



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 91/241 (37%), Gaps = 15/241 (6%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VV+G    +L +   +G  ++ +  S   +L    F  + Q +A  +YD+   L     D
Sbjct: 887  VVTGSDDKTLKIWRPNGELLQTIPTSDGGVLSV-SFDYHNQILATGSYDNIVQLWQISPD 945

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--LQSNATERLTNTL 301
                     +      + +  FS NG+  + S   D  + +++ D  LQ++ + +     
Sbjct: 946  GTNITLLNTLTEHTGPVWSVAFSPNGEFLV-SGGGDGTIKLWNKDGVLQNSWSSQ---GQ 1001

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             I   A  S DS  I +       E + +   +GS ++ +SQ    +     +SP G  +
Sbjct: 1002 TIRTVA-ISRDSQLIAYG---GSGETVQIWGVDGSLKRELSQYHTGTILGLDFSPDGRFL 1057

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            A      +   I  +  +         +  +    +SP  + L        D  +KL+++
Sbjct: 1058 ASVA-EDDMVKIWDVNSNLINSFKTYHNDIVSDVNFSPDSKILA---TVGTDGSAKLWTV 1113

Query: 422  D 422
             
Sbjct: 1114 S 1114



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 97/268 (36%), Gaps = 32/268 (11%)

Query: 167  TGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYL--TPSRDQILFEPRFSPN 222
            T + G  +    + ++ + +G   N   L  +  DG NI  L         ++   FSPN
Sbjct: 911  TSDGGVLSVSFDYHNQILATGSYDNIVQLWQISPDGTNITLLNTLTEHTGPVWSVAFSPN 970

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             + +   +   +  ++++  D  +  +     +    I     S + +         E +
Sbjct: 971  GEFL--VSGGGDGTIKLWNKDGVLQNSW---SSQGQTIRTVAISRDSQLIAYGGS-GETV 1024

Query: 283  DIYSVDLQSNATER-LTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             I+ VD    + +R L+       +   +SPD   +   ++    + + +   N +    
Sbjct: 1025 QIWGVD---GSLKRELSQYHTGTILGLDFSPDGRFLASVAE---DDMVKIWDVNSNLINS 1078

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL------VEDSNLQA 394
                      D  +SP   ++A     G    +  +    S E+L          + + +
Sbjct: 1079 FKTYHNDIVSDVNFSPDSKILATVGTDGSA-KLWTV----SGEKLAVFNGHRTRQTRVLS 1133

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             ++S  G+ LI S   DG   + L+++D
Sbjct: 1134 VSFSNDGKKLI-STDTDG--VAILWNLD 1158


>gi|307592329|ref|YP_003899920.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306985974|gb|ADN17854.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 1173

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 57/342 (16%), Positives = 121/342 (35%), Gaps = 46/342 (13%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI----YQSITGEKGDFNSRILFVS--- 181
           RLWDV   + +  K F         +A + ++ +    ++S      D ++R    +   
Sbjct: 665 RLWDVNTGQCL--KIFEQDDTQSLGVAFSPNNQVLASSHESGKIHLWDISTRQYLATLQD 722

Query: 182 --------------ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                         + + SG    ++ + D       ++      I+    FSP    +A
Sbjct: 723 NTHRVECIAFSPDGQKLASGSSDKTVKIWDLTTKKCLFILQGHTDIIISVSFSPKTNILA 782

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            +  D      V L D    R  K +    + +    FS +GK  L S   D+ + ++  
Sbjct: 783 SSGEDK----TVKLWDINTGRCVKTLEGHETRVWIVDFSPDGK-ILASGSDDQTVKLW-- 835

Query: 288 DLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           DL  N   +        + S ++SPD  ++V  S+    + L +        +++     
Sbjct: 836 DLSKNQCCKTLRGWSNGVWSIAFSPDGHKLVSGSN---DQTLNLWDITTGLCRKMWHGHN 892

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                  +SP   + A +    +   I  ++     + L      + +  +SP G++L  
Sbjct: 893 HRVTSVAFSPNNRIFA-SSSEDQTIKIWDVETLQYIKSLQGHTHRVWSVAFSPDGQTLAS 951

Query: 407 SRKKDGDTGSKLYSI-------DLNGRNETLINTPAYASDPQ 441
             ++      +L++I        L G    + +  A++ D +
Sbjct: 952 GSQEQ---VVRLWNITTGQCFKSLQGHTHRIWSV-AFSPDGR 989



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 100/275 (36%), Gaps = 23/275 (8%)

Query: 171  GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            G ++         +VSG    +L + D      R +    +  +    FSPN +  A ++
Sbjct: 852  GVWSIAFSPDGHKLVSGSNDQTLNLWDITTGLCRKMWHGHNHRVTSVAFSPNNRIFASSS 911

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             D      + + D    +  K +      + +  FS +G+    S  +++ + ++  ++ 
Sbjct: 912  EDQ----TIKIWDVETLQYIKSLQGHTHRVWSVAFSPDGQTLA-SGSQEQVVRLW--NIT 964

Query: 291  SNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +    + L        S ++SPD   +   S     + + +   +     +I  + +   
Sbjct: 965  TGQCFKSLQGHTHRIWSVAFSPDGRILASGSH---DQTIRLWDIHTGQCLKIFDEHQDWI 1021

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSR 408
            +  V+SP G ++A +  S     I  +   G   + L   S+   +   S   + LI   
Sbjct: 1022 WSVVFSPDGRILA-SSSSDRTIKIWDV-FTGQCLKTLRGHSHCVYSIAISRDNQILI--- 1076

Query: 409  KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
               GD    L+ I+  G     +        P+W+
Sbjct: 1077 SGGGDQLINLWDIN-TGICLKSLP-----KQPKWI 1105



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 92/247 (37%), Gaps = 28/247 (11%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G   N + +        +++       ++  +FSP     A ++ D      + L D   
Sbjct: 574 GDTNNDIYLYSIKEERHKFIYKEHFGWIWSLKFSPKGNLFASSSVDK----TIKLWDVET 629

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-----TNTL 301
            ++ + +   +  + +  FSS+G     S  +D+ + ++  D+ +    ++     T +L
Sbjct: 630 GKSIQTLQGHKGGVWSIAFSSDGCLLA-SSSEDKTVRLW--DVNTGQCLKIFEQDDTQSL 686

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +    ++SP++  +   S   GK  +++   +        QD         +SP G  +
Sbjct: 687 GV----AFSPNNQVLA-SSHESGK--IHLWDISTRQYLATLQDNTHRVECIAFSPDGQKL 739

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           A +  S +   I        +   +++       + ++SP    L        D   KL+
Sbjct: 740 A-SGSSDKTVKIW--DLTTKKCLFILQGHTDIIISVSFSPKTNILA---SSGEDKTVKLW 793

Query: 420 SIDLNGR 426
            I+  GR
Sbjct: 794 DIN-TGR 799



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ SG  +  + + +                ++   FSP+ + +A  ++D      + L
Sbjct: 947  QTLASGSQEQVVRLWNITTGQCFKSLQGHTHRIWSVAFSPDGRILASGSHDQ----TIRL 1002

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
             D    +  K     +  I +  FS +G+  L S   D  + I+  D+ +    + L   
Sbjct: 1003 WDIHTGQCLKIFDEHQDWIWSVVFSPDGR-ILASSSSDRTIKIW--DVFTGQCLKTLRGH 1059

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S + S D+  ++      G + + +   N     +    +    +    SP G 
Sbjct: 1060 SHCVYSIAISRDNQILI---SGGGDQLINLWDINTGICLKSLPKQPKWIWAVRLSPDGQ 1115



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 57/169 (33%), Gaps = 15/169 (8%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQI 316
             I +  FS +G   +I    D   DIY   ++    + +         S  +SP  +  
Sbjct: 557 GGIHSLAFSPDGSFLVI---GDTNNDIYLYSIKEERHKFIYKEHFGWIWSLKFSPKGNLF 613

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              S     + + +         +  Q  +   +   +S  G L+A +        + + 
Sbjct: 614 ASSSV---DKTIKLWDVETGKSIQTLQGHKGGVWSIAFSSDGCLLASSSEDKT---VRLW 667

Query: 377 KKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +  Q   + E  + Q+    +SP+ + L  S  + G     L+ I  
Sbjct: 668 DVNTGQCLKIFEQDDTQSLGVAFSPNNQVLA-SSHESGK--IHLWDIST 713


>gi|170115916|ref|XP_001889151.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635941|gb|EDR00242.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1415

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 11/224 (4%)

Query: 185  VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VSG    +L + D   G ++       D  +    FSP+ + +A  + D    +RV+   
Sbjct: 1029 VSGSNDATLRIWDALTGLSVMGPLKGHDHQVTSVAFSPDGRYIASGSRDC--TVRVWDAL 1086

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            T         G+ + ++ +  FS +G+    S   D  + +++     +  +  T     
Sbjct: 1087 TGQCVIDPLKGHGKGVV-SVAFSPDGRYLA-SGSWDMTVRVWNALTGQSVLDPFTGHTSW 1144

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S S+SPD     F       + +    +  G          +       +SP G  I 
Sbjct: 1145 IHSVSFSPDGK---FIISGSEDDTIRAWNALTGQSVMNPLICHKYGVKSVAFSPDGRYIV 1201

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
                      +       S    L    + + +  +SP GR ++
Sbjct: 1202 SGSRDDTV-RVWDFNAGQSVMDPLKGHGDVVDSVAFSPDGRYIV 1244



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 45/246 (18%), Positives = 86/246 (34%), Gaps = 22/246 (8%)

Query: 186  SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            SG    ++ V D   G  +        + +    FSP+ + +A  ++D    +RV+   T
Sbjct: 1073 SGSRDCTVRVWDALTGQCVIDPLKGHGKGVVSVAFSPDGRYLASGSWDM--TVRVWNALT 1130

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                         S I +  FS +GK   IS  +D+ +  ++     +    L    +  
Sbjct: 1131 GQSVL-DPFTGHTSWIHSVSFSPDGKFI-ISGSEDDTIRAWNALTGQSVMNPLICHKYGV 1188

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++SPD   IV  S R+   +++   +  S    +    +       +SP G  I   
Sbjct: 1189 KSVAFSPDGRYIVSGS-RDDTVRVWDFNAGQSVMDPLKGHGDVVDSV-AFSPDGRYIVSG 1246

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQ-----APTWSPSGRSLIFSRKKDGDTGSKLY 419
                    I +   +      L +          +  +SP GR +       G + + + 
Sbjct: 1247 SDDKT---IRLWDAETGYS--LGDPFKGHYAAVLSVVFSPDGRHIA-----SGSSDNTIR 1296

Query: 420  SIDLNG 425
              D +G
Sbjct: 1297 LWDAHG 1302



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 94/266 (35%), Gaps = 17/266 (6%)

Query: 186  SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            SG   +++ V D   G          D  +    FSPN + +   + D    LR++   T
Sbjct: 987  SGSGGHTIKVWDALTGHTEIDHVRGHDYGITSVAFSPNCKHIVSGSNDA--TLRIWDALT 1044

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLF 302
             +       G+    + +  FS +G+    S  +D  + ++  D  +     + L     
Sbjct: 1045 GLSVMGPLKGHDH-QVTSVAFSPDGRYIA-SGSRDCTVRVW--DALTGQCVIDPLKGHGK 1100

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLI 361
              +S ++SPD   +   S       + V  +              S+     +SP G  I
Sbjct: 1101 GVVSVAFSPDGRYLASGS---WDMTVRVWNALTGQSVLDPFTGHTSWIHSVSFSPDGKFI 1157

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG----DTGSK 417
                      A   +        L+     +++  +SP GR ++   + D     D  + 
Sbjct: 1158 ISGSEDDTIRAWNALTGQSVMNPLICHKYGVKSVAFSPDGRYIVSGSRDDTVRVWDFNAG 1217

Query: 418  LYSIDLNGRNETLINTPAYASDPQWV 443
               +D    +  ++++ A++ D +++
Sbjct: 1218 QSVMDPLKGHGDVVDSVAFSPDGRYI 1243



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 81/219 (36%), Gaps = 13/219 (5%)

Query: 186  SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            SG    ++ V +   G ++          +    FSP+ + +   + D  D +R +   T
Sbjct: 1116 SGSWDMTVRVWNALTGQSVLDPFTGHTSWIHSVSFSPDGKFIISGSED--DTIRAWNALT 1173

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                    I +    + +  FS +G+  + S  +D+ + ++  +   +  + L     + 
Sbjct: 1174 GQSVMNPLICHKYG-VKSVAFSPDGRYIV-SGSRDDTVRVWDFNAGQSVMDPLKGHGDVV 1231

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SPD   IV  SD    + + +  +  G       +   A+    V+SP G  IA 
Sbjct: 1232 DSVAFSPDGRYIVSGSD---DKTIRLWDAETGYSLGDPFKGHYAAVLSVVFSPDGRHIAS 1288

Query: 364  TKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSG 401
                     I +    G    L     S   + T+ PSG
Sbjct: 1289 GSSDNT---IRLWDAHGGCIDLNPSSPSVTLSSTFLPSG 1324



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 55/326 (16%), Positives = 101/326 (30%), Gaps = 49/326 (15%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQII---------GKKFFSSPASWRKIAHTIS 159
             V      +  +        R+WD    + ++          K    SP+  R I     
Sbjct: 804  SVAYSPDGKHIISGSEDKTIRVWDAFTGQSVMDPLKGHGSPVKSVAYSPSG-RHIVPGSC 862

Query: 160  D---DIYQSITGE--------KGDFNSRILFVS--ESVVSGIIKNSLCVMDR-DGANIRY 205
            D    I+ + TG+          D+   + +     ++VSG    ++ V D   G +++ 
Sbjct: 863  DCTVRIWDAGTGQCVMDPLIGHDDWVQSVAYSPDGMNIVSGSNDKTIRVWDALSGQSVKI 922

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            L    D I     FS + + +       +  L  +            + +    +    F
Sbjct: 923  LFEGSDPIYTV-AFSLDGKHIV---CAAKYRLIRFWNALTSQCMLSPLEDDEGSVYRVAF 978

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDRE 323
            S NGK  +          I   D  +  TE   +    +   S ++SP+   IV  S+  
Sbjct: 979  SPNGKHII---SGSGGHTIKVWDALTGHTEIDHVRGHDYGITSVAFSPNCKHIVSGSN-- 1033

Query: 324  GKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                L +  +  G       +  +       +SP G  IA          + V      Q
Sbjct: 1034 -DATLRIWDALTGLSVMGPLKGHDHQVTSVAFSPDGRYIASGSRDCT---VRVWDALTGQ 1089

Query: 383  ERL---LVEDSNLQAPTWSPSGRSLI 405
              +         + +  +SP GR L 
Sbjct: 1090 CVIDPLKGHGKGVVSVAFSPDGRYLA 1115



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 82/231 (35%), Gaps = 16/231 (6%)

Query: 185 VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VSG  + ++ + D   G N+  L    +  +    +SP+ + +     D  D   +    
Sbjct: 729 VSGSNEGAIHIWDALTGHNVMDLERHANYGVLAVAYSPDGKHII---SDSGDNTIIVWDA 785

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           +        +    S +L+  +S +GK   IS  +D+ + ++      +  + L      
Sbjct: 786 STGQSVMDPLEGHNSWVLSVAYSPDGKHI-ISGSEDKTIRVWDAFTGQSVMDPLKGHGSP 844

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLI 361
             S +YSP    IV        +    +   G+ Q  +      +       +SP G  I
Sbjct: 845 VKSVAYSPSGRHIV----PGSCDCTVRIWDAGTGQCVMDPLIGHDDWVQSVAYSPDGMNI 900

Query: 362 AFTKFSGEKFAIGVMK-KDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKK 410
                      I V     G   ++L E S+ +    +S  G+ ++ + K 
Sbjct: 901 VSGSNDKT---IRVWDALSGQSVKILFEGSDPIYTVAFSLDGKHIVCAAKY 948



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 69/204 (33%), Gaps = 16/204 (7%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                +  ++   FSPN + +   +      ++V+   T         G+   +  +  FS
Sbjct: 966  LEDDEGSVYRVAFSPNGKHII--SGSGGHTIKVWDALTGHTEIDHVRGHDYGIT-SVAFS 1022

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISASYSPDSSQIVFESDREG 324
             N K  + S   D  + I+  D  +       L        S ++SPD   I   S R+ 
Sbjct: 1023 PNCKHIV-SGSNDATLRIW--DALTGLSVMGPLKGHDHQVTSVAFSPDGRYIASGS-RDC 1078

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              +++     G       +          +SP G  +A   +      + V      Q  
Sbjct: 1079 TVRVWDA-LTGQCVIDPLKGHGKGVVSVAFSPDGRYLASGSWD---MTVRVWNALTGQSV 1134

Query: 385  L---LVEDSNLQAPTWSPSGRSLI 405
            L       S + + ++SP G+ +I
Sbjct: 1135 LDPFTGHTSWIHSVSFSPDGKFII 1158


>gi|170728810|ref|YP_001762836.1| peptidase S9 prolyl oligopeptidase [Shewanella woodyi ATCC 51908]
 gi|169814157|gb|ACA88741.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella woodyi ATCC 51908]
          Length = 681

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 103/278 (37%), Gaps = 37/278 (13%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-L 237
                V        L +  +DG++ R LT  +   + EP FSP+ + +A+ +  DED   
Sbjct: 59  VTQYDVPEDKGATQLWLFAKDGSSQRPLTA-KGLRVSEPVFSPDSKVLAFVSKRDEDEDG 117

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           ++YL+        +R+ +    +   ++   G+      +         +       E+L
Sbjct: 118 QIYLLPMDRAGEAQRLTDVPGGVKGVKW--VGEHVYFISRVFPDKTWPEM------AEQL 169

Query: 298 TNTLFINISAS------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-------D 344
           T      +SA       YS     I    + + +  ++ + + G + + ++Q        
Sbjct: 170 TANKKDKVSARQWNALPYSSFDHWI----EEDRQAHVFRIPAKGGEVEAVTQAMNKQLPR 225

Query: 345 KEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTW 397
              S  +   SP    IAF           K  I + K    +   +   +N     PT+
Sbjct: 226 SSQSAANYDISPDERFIAFNSNGWDNRVDPKIDIFLAKIGSDKAENVTAKNNAPDTNPTF 285

Query: 398 SPSGRSLIFSRK-KDGDTG--SKLYSIDLNGRNETLIN 432
           SP G++L F+R+   G     + L  +D+  R E  I 
Sbjct: 286 SPDGKTLAFTRQLIHGFYADTANLILLDVKKRTERNIT 323



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 62/166 (37%), Gaps = 12/166 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATY----DDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            P   Q       SP+++ +A+ +       +  + ++L     D+A        +    
Sbjct: 223 LPRSSQSAANYDISPDERFIAFNSNGWDNRVDPKIDIFLAKIGSDKAENVTAKNNAPDTN 282

Query: 263 PRFSSNGKRALISVQ-----KDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQI 316
           P FS +GK    + Q       +  ++  +D++      +T     +++  S++ DS   
Sbjct: 283 PTFSPDGKTLAFTRQLIHGFYADTANLILLDVKKRTERNITADWDRSVARFSWTADSKGF 342

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               D     +++ +       + I+Q  + ++     +  G LIA
Sbjct: 343 YAAIDDAATRRIFHINGKNGKVRAITQ--QTNFGRLSIAKDGTLIA 386



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 40/103 (38%), Gaps = 9/103 (8%)

Query: 351 DPVWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRS 403
            P  S  G+ I                 + +  KDGS +R L      +  P +SP  + 
Sbjct: 45  SPTISSNGEFIIAPVTQYDVPEDKGATQLWLFAKDGSSQRPLTAKGLRVSEPVFSPDSKV 104

Query: 404 LIFSRKKDGDTGSKLYS--IDLNGRNETLINTPAYASDPQWVG 444
           L F  K+D D   ++Y   +D  G  + L + P      +WVG
Sbjct: 105 LAFVSKRDEDEDGQIYLLPMDRAGEAQRLTDVPGGVKGVKWVG 147



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 58/177 (32%), Gaps = 14/177 (7%)

Query: 266 SSNGKRALISV-----QKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFE 319
           S + +    +      + D  +DI+   + S+  E +T      + + ++SPD   + F 
Sbjct: 236 SPDERFIAFNSNGWDNRVDPKIDIFLAKIGSDKAENVTAKNNAPDTNPTFSPDGKTLAFT 295

Query: 320 SD-----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                        L ++      ++ I+ D + S     W+                 I 
Sbjct: 296 RQLIHGFYADTANLILLDVKKRTERNITADWDRSVARFSWTADSKGFYAAIDDAATRRIF 355

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
            +     + R + + +N    + +  G  +           +++  I+  NG+   L
Sbjct: 356 HINGKNGKVRAITQQTNFGRLSIAKDGTLIA--SNDSFLYPARVVKINPKNGKTTRL 410


>gi|166366485|ref|YP_001658758.1| WD repeat-containing protein [Microcystis aeruginosa NIES-843]
 gi|166088858|dbj|BAG03566.1| WD-repeat protein [Microcystis aeruginosa NIES-843]
          Length = 1230

 Score = 79.7 bits (195), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 96/262 (36%), Gaps = 29/262 (11%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++VSG    ++ + D             D  +    FS + + +   + D      + L
Sbjct: 905  KTLVSGSDDGTIKLWDVKTGEEIRTLHGHDYPVRSVNFSRDGKTLVSGSDDK----TIIL 960

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-- 299
             D +  +    +     ++ +  FS NG+  + S   D  + ++  ++++       +  
Sbjct: 961  WDVKTGKKIHTLKGHGGLVRSVNFSPNGETLV-SGSWDGTIKLW--NVKTGKEIPTFHGF 1017

Query: 300  --TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                    S ++SPD   +V  SD    + + +      ++    +          +SP 
Sbjct: 1018 QGHDGRVRSVNFSPDGKTLVSGSD---NKTITLWNVETGEEIHTFEGHHDRVRSVNFSPN 1074

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            G+ +    +      I +   +  QE       D  +++  +SP+G++L+       D  
Sbjct: 1075 GETLVSGSYDKT---IKLWDVEKRQEIHTFKGHDGPVRSVNFSPNGKTLVSGSD---DKT 1128

Query: 416  SKLYSI-------DLNGRNETL 430
             KL+++        L+G N  +
Sbjct: 1129 IKLWNVEKRQEIRTLHGHNSRV 1150



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 87/249 (34%), Gaps = 27/249 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R         +    FS + + +   + D      + L +    +  + +      + +
Sbjct: 591 ERNRLEGHGSYVHSVNFSRDGKTLVSGSDDK----TIKLWNVETGQEIRTLKGHGGPVYS 646

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
             FS +GK  + S   D+ + ++  ++++    R L        S ++S D   +V  SD
Sbjct: 647 VNFSRDGKTLV-SGSDDKTIKLW--NVETGQEIRTLKGHGGTVYSVNFSRDGKTLVSGSD 703

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               + + +       + R  +  E   +   +S  G  +           I +   +  
Sbjct: 704 ---DKTIKLWDVEKPQEIRTLKVHEGPVYSVNFSRNGKTLV---SGSGDKTIKLWNVETG 757

Query: 382 QERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-------DLNGRNETLIN 432
           QE   +      + +  +S  G++L+      GD   KL+++        L G N  + +
Sbjct: 758 QEIRTLKGHGGPVYSVNFSHDGKTLV---SGSGDKTIKLWNVEKPQEIRTLKGHNSRVRS 814

Query: 433 TPAYASDPQ 441
              ++ D +
Sbjct: 815 VN-FSRDGK 822



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 51/337 (15%), Positives = 114/337 (33%), Gaps = 51/337 (15%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ +  G D   +  +LWDVK  ++I             +  H     +        G  
Sbjct: 904  GKTLVSGSDDGTI--KLWDVKTGEEI-------------RTLHGHDYPVRSVNFSRDG-- 946

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    +++VSG    ++ + D       +       ++    FSPN + +   ++D 
Sbjct: 947  --------KTLVSGSDDKTIILWDVKTGKKIHTLKGHGGLVRSVNFSPNGETLVSGSWDG 998

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                 + L + +  +       F+     + +  FS +GK  +      +   I   +++
Sbjct: 999  ----TIKLWNVKTGKEIPTFHGFQGHDGRVRSVNFSPDGKTLV---SGSDNKTITLWNVE 1051

Query: 291  SNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            +      T     +   S ++SP+   +V  S     + + +       +    +  +  
Sbjct: 1052 TGEEIH-TFEGHHDRVRSVNFSPNGETLVSGSY---DKTIKLWDVEKRQEIHTFKGHDGP 1107

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIF 406
                 +SP G  +           I +   +  QE   +   N +  +  +SP+G++L+ 
Sbjct: 1108 VRSVNFSPNGKTLVSGSDDKT---IKLWNVEKRQEIRTLHGHNSRVRSVNFSPNGKTLV- 1163

Query: 407  SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
                  D   KL+ ++ +     L      + D  WV
Sbjct: 1164 --SGSWDNTIKLWKVETDSNLLNLDALMGRSCD--WV 1196



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 94/262 (35%), Gaps = 17/262 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++VSG    ++ + + +              ++   FS + + +   + D      + L
Sbjct: 612 KTLVSGSDDKTIKLWNVETGQEIRTLKGHGGPVYSVNFSRDGKTLVSGSDDK----TIKL 667

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +    +  + +      + +  FS +GK  + S   D+ + ++ V+ +      L    
Sbjct: 668 WNVETGQEIRTLKGHGGTVYSVNFSRDGKTLV-SGSDDKTIKLWDVE-KPQEIRTLKVHE 725

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++S +   +V  S   G + + +       + R  +      +   +S  G  +
Sbjct: 726 GPVYSVNFSRNGKTLVSGS---GDKTIKLWNVETGQEIRTLKGHGGPVYSVNFSHDGKTL 782

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +    +   +  ++K      L   +S +++  +S  G++L+       D   KL++ 
Sbjct: 783 V-SGSGDKTIKLWNVEKPQEIRTLKGHNSRVRSVNFSRDGKTLV---SGSWDNTIKLWN- 837

Query: 422 DLNGRNETLINTPAYASDPQWV 443
                 + ++    +   P W 
Sbjct: 838 --ESTGQEILTLKGHEG-PVWS 856



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 86/230 (37%), Gaps = 20/230 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++VSG   N++ + +             +  ++   FSP++ K         D   + L
Sbjct: 822  KTLVSGSWDNTIKLWNESTGQEILTLKGHEGPVWSVNFSPDEGK---TLVSGSDDGTIKL 878

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +  I +  K       ++ +  F+ +  + L+S   D  + ++  D+++    R  +  
Sbjct: 879  WNVEIVQTLK---GHDDLVNSVEFNPDEGKTLVSGSDDGTIKLW--DVKTGEEIRTLHGH 933

Query: 302  FINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               + S ++S D   +V  SD    + + +       +    +          +SP G+ 
Sbjct: 934  DYPVRSVNFSRDGKTLVSGSD---DKTIILWDVKTGKKIHTLKGHGGLVRSVNFSPNGET 990

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLV-----EDSNLQAPTWSPSGRSLI 405
            +    + G    I +      +E          D  +++  +SP G++L+
Sbjct: 991  LVSGSWDGT---IKLWNVKTGKEIPTFHGFQGHDGRVRSVNFSPDGKTLV 1037



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 95/272 (34%), Gaps = 17/272 (6%)

Query: 171 GDFNSRILFVSESVVSG------IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           G     ++ V  S   G        +  L + +  G +   L     ++          +
Sbjct: 507 GIAAGSLVAVVVSTGLGLMAWKQTQQAELNLANARGFSSLSLFDRGKELDAFVEAIKAGK 566

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +      D++++              R+    S + +  FS +GK  + S   D+ + +
Sbjct: 567 TLQKQQASDKEVMNALQELLNRKSERNRLEGHGSYVHSVNFSRDGKTLV-SGSDDKTIKL 625

Query: 285 YSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +  ++++    R L        S ++S D   +V  SD    + + +       + R  +
Sbjct: 626 W--NVETGQEIRTLKGHGGPVYSVNFSRDGKTLVSGSD---DKTIKLWNVETGQEIRTLK 680

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
               + +   +S  G  +  +    +   +  ++K      L V +  + +  +S +G++
Sbjct: 681 GHGGTVYSVNFSRDGKTLV-SGSDDKTIKLWDVEKPQEIRTLKVHEGPVYSVNFSRNGKT 739

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           L+      GD   KL++++      TL     
Sbjct: 740 LV---SGSGDKTIKLWNVETGQEIRTLKGHGG 768


>gi|325924864|ref|ZP_08186298.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           perforans 91-118]
 gi|325544709|gb|EGD16058.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           perforans 91-118]
          Length = 789

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 89/214 (41%), Gaps = 17/214 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATE---RLT 298
            + +RA +   +      A  +S +G+   + ++  +  D +   VDL +   +   RL+
Sbjct: 322 LKGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDLDNARLQPRHRLS 381

Query: 299 NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++ +IN   +   + PD+  +   S+  G  QLY ++ NG  ++R     +     PV S
Sbjct: 382 DSAWINWDFNDFGWLPDNRTLWLLSEESGYSQLYTVEGNGKPRQR--TRGKWEVSMPVPS 439

Query: 356 PQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  + F         + +  +     Q   +   + ++  + SP+G+ L+  R     
Sbjct: 440 ADGSGMFFLCNQKWPGDYEVCKLDLRNDQLTEITALNGVEGFSLSPNGQQLL-VRYSGSY 498

Query: 414 TGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
             ++L  +   G   T++    T A+ + P W+ 
Sbjct: 499 LPTQLAVVPATGGQATVLTDTRTAAFKAQP-WIA 531



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 62/191 (32%), Gaps = 17/191 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-------PNQQKV 226
           + R + V    V    +    +   D  N R     R        +        P+ + +
Sbjct: 346 DGRNVAVEIRAVDNKDR---WIASVDLDNARLQPRHRLSDSAWINWDFNDFGWLPDNRTL 402

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDI 284
              + +        L     +  P++    +  +  P  S++G        +      ++
Sbjct: 403 WLLSEESG---YSQLYTVEGNGKPRQRTRGKWEVSMPVPSADGSGMFFLCNQKWPGDYEV 459

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQ 343
             +DL+++    +T    +    S SP+  Q++          QL V+ + G     ++ 
Sbjct: 460 CKLDLRNDQLTEITALNGVEGF-SLSPNGQQLLVRYSGSYLPTQLAVVPATGGQATVLTD 518

Query: 344 DKEASYFDPVW 354
            + A++    W
Sbjct: 519 TRTAAFKAQPW 529



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 11/118 (9%)

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQER---LL 386
              G+   R+  D + S     WS  G  +A        +   I  +  D ++ +    L
Sbjct: 321 PLKGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDLDNARLQPRHRL 380

Query: 387 VEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            + + +        W P  R+L    ++ G   S+LY+++ NG+           S P
Sbjct: 381 SDSAWINWDFNDFGWLPDNRTLWLLSEESG--YSQLYTVEGNGKPRQRTRGKWEVSMP 436



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 46/125 (36%), Gaps = 12/125 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--SMILA-PRFSSNGKRALI 274
            +  + ++V Y    D   +R            +R+ +     +  A P + +  +R L 
Sbjct: 44  WWQWDGKQVQYLLKRDGSPVRDTYRQGTGGGTAERVADTARAGLDAANPSYDATRQRMLF 103

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +   D    I+  DL++ A  +LT +        ++ D   I     R G    Y  +++
Sbjct: 104 ARNGD----IFLRDLRTGALTQLTRSNETESRPQFASDGGAIW----RAGNN-WYHWRAD 154

Query: 335 GSDQK 339
           G   +
Sbjct: 155 GGTAQ 159



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 44/146 (30%), Gaps = 18/146 (12%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              ++  A +  D  Q+ +   R+G      Y   + G   +R++    A       S  
Sbjct: 37  GPAVD-QAWWQWDGKQVQYLLKRDGSPVRDTYRQGTGGGTAERVADTARAGLDAANPSYD 95

Query: 358 GDL--IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDT 414
                + F +       I +          L   +  ++ P ++  G ++          
Sbjct: 96  ATRQRMLFARNGD----IFLRDLRTGALTQLTRSNETESRPQFASDGGAIW-------RA 144

Query: 415 GSKLYSIDLNGRNETLINTPAYASDP 440
           G+  Y    +G    +    A   DP
Sbjct: 145 GNNWYHWRADGGTAQVAVVKAE-RDP 169


>gi|327438783|dbj|BAK15148.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Solibacillus
           silvestris StLB046]
          Length = 657

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 73/218 (33%), Gaps = 50/218 (22%)

Query: 263 PRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P  + N + A+    +      +    ++ +DL+S    + T       S  +S D  Q+
Sbjct: 19  PVLAPNEQEAVFIRTQINEKENNYNAHLFHIDLESGEITQWTYGNERVSSPQWSTDGKQV 78

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---------- 366
            F   R  K+QLY++   G + + I+          +WSP G+ +  T            
Sbjct: 79  AFLVKRNEKQQLYILSRRGGEAQEITTLPNG-VNSFLWSPCGEKVWITSTVKKGLDITKE 137

Query: 367 ----------------------------SGEKFAIGVMKKDGSQERLLVEDSNLQAPT-W 397
                                             I  +     +     E +        
Sbjct: 138 EEKEDTKFPKAYVVDKMKYKADSVGLLKQDRYSQIAAVDLATKEVNTFTEGNYSHILQGI 197

Query: 398 SPSGRSLIFSRKKDGDTGSK----LYSIDLNGRNETLI 431
           S  G++L+ +  ++ +T +     LY +D++ + ET++
Sbjct: 198 SHDGKTLVIAVNREENTDNVFRTPLYLVDVDSKEETVL 235



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 85/273 (31%), Gaps = 53/273 (19%)

Query: 212 QILFEPRFSPNQQKVAYAT---YDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPRFSS 267
           Q +  P  +PN+Q+  +      + E+    +L    +      +       + +P++S+
Sbjct: 14  QSIANPVLAPNEQEAVFIRTQINEKENNYNAHLFHIDLESGEITQWTYGNERVSSPQWST 73

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------ 321
           +GK+    V+++E   +Y +  +    + +T       S  +SP   ++   S       
Sbjct: 74  DGKQVAFLVKRNEKQQLYILSRRGGEAQEITTLPNGVNSFLWSPCGEKVWITSTVKKGLD 133

Query: 322 --------------------------------REGKEQLYVMQSNGSDQKRISQDKEASY 349
                                           ++   Q+  +     +    + +   S+
Sbjct: 134 ITKEEEKEDTKFPKAYVVDKMKYKADSVGLLKQDRYSQIAAVDLATKEVNTFT-EGNYSH 192

Query: 350 FDPVWSPQGDLIAFT----KFSGEKFA--IGVMKKDGSQERLLV-EDSNLQAPTWSPSGR 402
                S  G  +       + +   F   + ++  D  +E +L+ ED       +S   R
Sbjct: 193 ILQGISHDGKTLVIAVNREENTDNVFRTPLYLVDVDSKEETVLIEEDGYFGGAEFSFDDR 252

Query: 403 SLIFSRKKD---GDTGSKLYSIDLNGRNETLIN 432
            + F          T   +Y  D   +    + 
Sbjct: 253 YIAFGGSDHTFRNATHGHVYIYDTETKTTQQLT 285



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 84/263 (31%), Gaps = 57/263 (21%)

Query: 178 LFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +F+   +       +  +   D   G   ++     ++ +  P++S + ++VA+    +E
Sbjct: 29  VFIRTQINEKENNYNAHLFHIDLESGEITQWTY--GNERVSSPQWSTDGKQVAFLVKRNE 86

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----------------- 277
                 L  +R     + I    + + +  +S  G++  I+                   
Sbjct: 87  KQQLYIL--SRRGGEAQEITTLPNGVNSFLWSPCGEKVWITSTVKKGLDITKEEEKEDTK 144

Query: 278 ---------------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                                +D    I +VDL +      T   + +I    S D   +
Sbjct: 145 FPKAYVVDKMKYKADSVGLLKQDRYSQIAAVDLATKEVNTFTEGNYSHILQGISHDGKTL 204

Query: 317 VFESDREGKEQ------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-----TK 365
           V   +RE          LY++  +  ++  +  +++  +    +S     IAF     T 
Sbjct: 205 VIAVNREENTDNVFRTPLYLVDVDSKEETVLI-EEDGYFGGAEFSFDDRYIAFGGSDHTF 263

Query: 366 FSGEKFAIGVMKKDGSQERLLVE 388
            +     + +   +    + L E
Sbjct: 264 RNATHGHVYIYDTETKTTQQLTE 286



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 10/105 (9%)

Query: 348 SYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPS 400
           S  +PV +P      F +       +     +  +  +  +       +  + +P WS  
Sbjct: 15  SIANPVLAPNEQEAVFIRTQINEKENNYNAHLFHIDLESGEITQWTYGNERVSSPQWSTD 74

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           G+ + F  K++     +LY +   G     I T P   +   W  
Sbjct: 75  GKQVAFLVKRNEKQ--QLYILSRRGGEAQEITTLPNGVNSFLWSP 117


>gi|119358123|ref|YP_912767.1| WD-40 repeat-containing protein [Chlorobium phaeobacteroides DSM
           266]
 gi|119355472|gb|ABL66343.1| WD-40 repeat-containing protein [Chlorobium phaeobacteroides DSM
           266]
          Length = 316

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 80/248 (32%), Gaps = 29/248 (11%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             + SG   +++ + D       ++    D  +    FSP+   VA  + D      + +
Sbjct: 89  RRLASGSTDSTVRIWDAATGQCLHVCKGHDTAVRMVAFSPDSTVVASCSRDT----TIRI 144

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    R  KR     S I    +S +GK+        E   I   D Q+       NT 
Sbjct: 145 WDVETGRELKRFTGHISYIECLAWSHDGKKIA---SCGEETVIRIWDAQTGK-----NTA 196

Query: 302 FINISAS------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             N   +      +SPD S I F        ++ ++ +   +     +    +     ++
Sbjct: 197 NYNTGDTLSHAVVFSPDDSLIAFC---GRDSKIKILDARSGELLCTLEGHHDAVRSVCFT 253

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGD 413
           P G  IA          + +      +         L+  +   SP GR +        D
Sbjct: 254 PDGTEIASAANDES---VRLWDVKSGKLLHTYRGHTLEVQSVDISPDGRVIASGSD---D 307

Query: 414 TGSKLYSI 421
              KL+ I
Sbjct: 308 RKIKLWGI 315



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 81/210 (38%), Gaps = 18/210 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           AN+     +    +   +FS + +K+    +D+    +V L D    +    +    + +
Sbjct: 24  ANLLKTMEAHLDRVLGVKFSTDGKKLVSGGFDE----QVILWDIESGKPLHTMKGHETWV 79

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE 319
               +S + +R   S   D  + I+  D  +     +       +   ++SPDS+ +   
Sbjct: 80  ECVDYSRDQRRLA-SGSTDSTVRIW--DAATGQCLHVCKGHDTAVRMVAFSPDSTVVASC 136

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKK 378
           S R+   +++ +++ G + KR +     SY +   WS  G  IA     GE+  I +   
Sbjct: 137 S-RDTTIRIWDVET-GRELKRFT--GHISYIECLAWSHDGKKIASC---GEETVIRIWDA 189

Query: 379 DGSQ--ERLLVEDSNLQAPTWSPSGRSLIF 406
              +        D+   A  +SP    + F
Sbjct: 190 QTGKNTANYNTGDTLSHAVVFSPDDSLIAF 219


>gi|126658982|ref|ZP_01730124.1| Peptidase C14, caspase catalytic subunit p20 [Cyanothece sp.
           CCY0110]
 gi|126619780|gb|EAZ90507.1| Peptidase C14, caspase catalytic subunit p20 [Cyanothece sp.
           CCY0110]
          Length = 1060

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 54/324 (16%), Positives = 106/324 (32%), Gaps = 41/324 (12%)

Query: 109 QVLVTGRVIKEGK----DRLRVEFRLWDVKDR---KQIIGKKFFSSP----ASWRKIAHT 157
             + T  V  +G            RLW+ + +     ++G     +     A  R +   
Sbjct: 89  DKVSTVAVSPDGSIIVSGSWDGTIRLWNPQGQLLRDPLLGHGEKVTALAFSADGRYLISG 148

Query: 158 ISDDIY-------QSITGEKGDFNSRILFVSESVV-----SGIIKNSLCVMDRDGANIRY 205
            SD  +       +++T      N+ I  ++ S       +G    SL + D DG  ++ 
Sbjct: 149 SSDRTFIIWNRQGEAVTNRIEGHNAGITALACSPKGDYFITGSSDRSLKLWDFDGEPLKP 208

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                D  +     SP+ Q +  +++D      + L +         I   +  I +  F
Sbjct: 209 PFQGHDGEITSIAISPDGQIIVSSSWDK----TLRLWNLEGKEIIDPITVHQQRIESVAF 264

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVF-ESDRE 323
           S +G+   IS   D+ + ++  +L+       +       +  + SPD   I    SDR 
Sbjct: 265 SPDGQY-FISGSWDKTIRLW--NLEGTEICPPIKGHEDYILCVAISPDGEMIASGSSDRT 321

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + +    G          + S  D  ++P G  +           +     +G + 
Sbjct: 322 ----IRIHNRYGQMIYDPFLGHQGSVRDIAFTPDGKTLI---SGSSDHEVRFWDIEGQRL 374

Query: 384 RLLVEDSNLQAPT--WSPSGRSLI 405
               +       +   SP G  LI
Sbjct: 375 FKATQSQYCAVWSVGISPDGERLI 398



 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 77/231 (33%), Gaps = 23/231 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           GA  +         +     SP+   +   ++D      + L + +       +      
Sbjct: 77  GAREKNCCFGHQDKVSTVAVSPDGSIIVSGSWDG----TIRLWNPQGQLLRDPLLGHGEK 132

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVF 318
           + A  FS++G+   IS   D    I+  + Q  A   R+        + + SP     + 
Sbjct: 133 VTALAFSADGRYL-ISGSSDRTFIIW--NRQGEAVTNRIEGHNAGITALACSPKGDYFIT 189

Query: 319 -ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             SDR     L +   +G   K   Q  +        SP G +I  + +      + +  
Sbjct: 190 GSSDRS----LKLWDFDGEPLKPPFQGHDGEITSIAISPDGQIIVSSSWDKT---LRLWN 242

Query: 378 KDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +G +    + V    +++  +SP G+  I      G     +   +L G 
Sbjct: 243 LEGKEIIDPITVHQQRIESVAFSPDGQYFI-----SGSWDKTIRLWNLEGT 288



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 77/233 (33%), Gaps = 23/233 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + +R G  I          + +  F+P+ + +   + D E    V   D  
Sbjct: 315 SGSSDRTIRIHNRYGQMIYDPFLGHQGSVRDIAFTPDGKTLISGSSDHE----VRFWDIE 370

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
             R  K   +    + +   S +G+R +          I   +L   +    +       
Sbjct: 371 GQRLFKATQSQYCAVWSVGISPDGERLI---SNWGNGSIRFWNLVGKSISNPIQAHNGDV 427

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +YSP   + V  S     E + +  + G     + +  +       + PQG+ I   
Sbjct: 428 TCMAYSPQGDKFVTGS---WDETIRIWTAAGKPLTELIKAHDGDVTCLAYHPQGNYIVTG 484

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGD 413
              G       +K   SQ + L +   ++       +SP G  ++ +    G 
Sbjct: 485 GRDGR------VKLWTSQGK-LCQQGQMEDEVTSVLFSPDGHKVM-ASDAKGQ 529



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 53/331 (16%), Positives = 114/331 (34%), Gaps = 47/331 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF--------SSPASWRKIAH------TIS 159
           G+ +  G     V F  WD++ ++     +           SP   R I++         
Sbjct: 352 GKTLISGSSDHEVRF--WDIEGQRLFKATQSQYCAVWSVGISPDGERLISNWGNGSIRFW 409

Query: 160 DDIYQSITGEKGDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           + + +SI+      N  +  ++ S      V+G    ++ +    G  +  L  + D  +
Sbjct: 410 NLVGKSISNPIQAHNGDVTCMAYSPQGDKFVTGSWDETIRIWTAAGKPLTELIKAHDGDV 469

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               + P    +           RV L  ++     +  G     + +  FS +G + ++
Sbjct: 470 TCLAYHPQGNYIV----TGGRDGRVKLWTSQGKLCQQ--GQMEDEVTSVLFSPDGHK-VM 522

Query: 275 SVQKDEAMDIYSVDLQ-------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +      +  +  + Q           E++T+        + SP  + +V  S  EG   
Sbjct: 523 ASDAKGQIWQWQGETQWLGTVIFKRNQEKITD-------LAISPQGNILV--SGYEGGNL 573

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            +        Q  I    +AS     +SP G ++  +  S     +  ++ +        
Sbjct: 574 CF-WDLENIAQPPIICSHDASITKIAFSPNGKVLV-SGGSDGNLRLWTVRGESLSYPQPN 631

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           ++S +    +SP G+ LI S   DG    ++
Sbjct: 632 KNSEVTYVKFSPDGQQLI-SGYLDGTIKIEI 661


>gi|238495088|ref|XP_002378780.1| hypothetical protein AFLA_060360 [Aspergillus flavus NRRL3357]
 gi|220695430|gb|EED51773.1| hypothetical protein AFLA_060360 [Aspergillus flavus NRRL3357]
          Length = 188

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 65/163 (39%), Gaps = 26/163 (15%)

Query: 307 ASYSPDSSQIVFE----------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            S+SPD ++IVF           + + G   L++ Q   +    ++         P +SP
Sbjct: 23  PSFSPDGTKIVFRVWGADAEDGDTSQLGLRILHLDQVTANGTYPVTVLTNWWDTLPSFSP 82

Query: 357 QGDLIAFTKF-SGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSR-KKDGD 413
            G  I F +  SG  + +  +  DGS  ++L    ++     WS  GR +++S  +    
Sbjct: 83  DGTKIVFMRRVSGSNYEVCTIAPDGSDLQVLTSSEADDAHAVWSHDGR-IMYSTGEYGFQ 141

Query: 414 TGSKLY-----------SIDLNGRNETLINTPAY-ASDPQWVG 444
           +   LY            +D +G N+  +    +  S P +V 
Sbjct: 142 SECALYDNTFQPYGQINIMDADGGNKRALTNSLWEDSMPAYVP 184



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 63/175 (36%), Gaps = 33/175 (18%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQ------SNATERLTNT 300
           GN       P FS +G + +  V   +A D       +  + L       +     LTN 
Sbjct: 14  GNNTLNTGFPSFSPDGTKIVFRVWGADAEDGDTSQLGLRILHLDQVTANGTYPVTVLTN- 72

Query: 301 LFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            + +   S+SPD ++IVF     G   ++  +  +GSD + ++   EA     VWS  G 
Sbjct: 73  -WWDTLPSFSPDGTKIVFMRRVSGSNYEVCTIAPDGSDLQVLTS-SEADDAHAVWSHDGR 130

Query: 360 LIAFTKFSGE--------------KFAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
            I ++                      I +M  DG  +R L         P + P
Sbjct: 131 -IMYSTGEYGFQSECALYDNTFQPYGQINIMDADGGNKRALTNSLWEDSMPAYVP 184



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 58/153 (37%), Gaps = 27/153 (17%)

Query: 216 EPRFSPNQQKVAYATYDDE-----------DILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            P FSP+  K+ +  +  +            IL +  +          + N+      P 
Sbjct: 22  FPSFSPDGTKIVFRVWGADAEDGDTSQLGLRILHLDQVTANGTYPVTVLTNWW--DTLPS 79

Query: 265 FSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------ 317
           FS +G + +   +      ++ ++    +  + LT++   +  A +S D   +       
Sbjct: 80  FSPDGTKIVFMRRVSGSNYEVCTIAPDGSDLQVLTSSEADDAHAVWSHDGRIMYSTGEYG 139

Query: 318 FESD-------REGKEQLYVMQSNGSDQKRISQ 343
           F+S+        +   Q+ +M ++G +++ ++ 
Sbjct: 140 FQSECALYDNTFQPYGQINIMDADGGNKRALTN 172



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 48/109 (44%), Gaps = 14/109 (12%)

Query: 348 SYFDPVWSPQGDLIAFTKF-----SGEKFAIGV-------MKKDGSQERLLVEDSNLQAP 395
           +   P +SP G  I F  +      G+   +G+       +  +G+    ++ +     P
Sbjct: 19  NTGFPSFSPDGTKIVFRVWGADAEDGDTSQLGLRILHLDQVTANGTYPVTVLTNWWDTLP 78

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWV 443
           ++SP G  ++F R+  G +  ++ +I  +G + + L ++ A  +   W 
Sbjct: 79  SFSPDGTKIVFMRRVSG-SNYEVCTIAPDGSDLQVLTSSEADDAHAVWS 126



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 35/114 (30%), Gaps = 14/114 (12%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +     P FSP+  K+ +          V  +        + + +  +      +S +G+
Sbjct: 72  NWWDTLPSFSPDGTKIVFMRRVSGSNYEVCTIAPD-GSDLQVLTSSEADDAHAVWSHDGR 130

Query: 271 RALISVQKD-------------EAMDIYSVDLQSNATERLTNTLFINISASYSP 311
               + +                   I  +D        LTN+L+ +   +Y P
Sbjct: 131 IMYSTGEYGFQSECALYDNTFQPYGQINIMDADGGNKRALTNSLWEDSMPAYVP 184


>gi|298242991|ref|ZP_06966798.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297556045|gb|EFH89909.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 566

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 79/258 (30%), Gaps = 22/258 (8%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            ++ + D + + +        + +    +SP+   +A A+ D      V + +    +  
Sbjct: 303 KTVALWDPETSQLLATYTGHRRDVTAVAWSPDGTCLASASSDR----TVQIWEAMTRKPV 358

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SAS 308
           +        + A  +S +G     S   D ++ ++            T    I+   + +
Sbjct: 359 RMYQEHTDDVFAVAWSPDGTYLA-SAGSDRSVRVWE-PTTGKTLS--TYHGHIDDILAVA 414

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SP    +   S       ++V       ++ ++    A  +   WSP G L+A   +  
Sbjct: 415 WSPKGKLLASASY---DTTVHVHDILSG-RQVLTYGGRAGVYALAWSPDGALLASASYDQ 470

Query: 369 EKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               + V +    +         + + A  WSP G  +      D +    ++       
Sbjct: 471 T---VQVREVPSGRLVQEYQGHTAGIFALAWSPDGSFIA---SGDDEKTIHIWEASTGKL 524

Query: 427 NETLINTPAYASDPQWVG 444
                          W  
Sbjct: 525 VHIYRGHMRGVRSLAWSP 542



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 70/218 (32%), Gaps = 17/218 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + +        +       +F   +SP+   +A           V + +  
Sbjct: 340 SASSDRTVQIWEAMTRKPVRMYQEHTDDVFAVAWSPDGTYLA----SAGSDRSVRVWEPT 395

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFIN 304
             +           ILA  +S  GK    S   D  + ++ + L       LT       
Sbjct: 396 TGKTLSTYHGHIDDILAVAWSPKGKLLA-SASYDTTVHVHDI-LSGRQV--LTYGGRAGV 451

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + ++SPD + +   S     + + V +       +  Q   A  F   WSP G  IA  
Sbjct: 452 YALAWSPDGALLASASY---DQTVQVREVPSGRLVQEYQGHTAGIFALAWSPDGSFIA-- 506

Query: 365 KFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPS 400
               ++  I + +    +   +       +++  WSP 
Sbjct: 507 -SGDDEKTIHIWEASTGKLVHIYRGHMRGVRSLAWSPD 543



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 52/179 (29%), Gaps = 14/179 (7%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+R     +  EA++  S          L   + +  S ++SP+   +         + +
Sbjct: 250 GQRFASVGEFAEALEKASKPPLGTTLLVLDTHIDLITSLAWSPNGLYLA----SSNGKTV 305

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +     S                 WSP G  +A             M +   +      
Sbjct: 306 ALWDPETSQLLATYTGHRRDVTAVAWSPDGTCLASASSDRTVQIWEAMTRKPVRMYQEHT 365

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP---QWVG 444
           D ++ A  WSP G  L        D   +++     G+  TL     +  D     W  
Sbjct: 366 D-DVFAVAWSPDGTYLA---SAGSDRSVRVWE-PTTGK--TLSTYHGHIDDILAVAWSP 417


>gi|315126189|ref|YP_004068192.1| peptidase [Pseudoalteromonas sp. SM9913]
 gi|315014703|gb|ADT68041.1| peptidase [Pseudoalteromonas sp. SM9913]
          Length = 647

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 7/171 (4%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           + I+   FS  G + L+S  +     +Y VD+++ +  RLTN         Y P+  +++
Sbjct: 52  TSIMGSSFSPTGDKVLVSSDESGIYSLYEVDVKTGSKTRLTNFEDSTYPIRYFPNDERVL 111

Query: 318 FESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           F  D  G E+  +YV + +GS  K ++  +E       ++  G     T    +   + +
Sbjct: 112 FTKDSGGNERYHVYVREVDGS-IKDLTPGEETRASFAGFTKDGSQFFITSNQRDAKFMDL 170

Query: 376 MKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            + D    ++         L     SP GR +  S+    +  S  + +D 
Sbjct: 171 YRVDSKTYKVTPVYQNTQGLDVGAISPDGRYIALSKNNT-NKDSDTFILDT 220



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 52/242 (21%), Positives = 94/242 (38%), Gaps = 25/242 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N +    +    +    FSP   KV   + D+  I  +Y +D +      R+ NF    
Sbjct: 43  YNAKTFFDTTS--IMGSSFSPTGDKVL-VSSDESGIYSLYEVDVKTGSKT-RLTNFEDST 98

Query: 261 LAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYS---PDSSQ 315
              R+  N +R L +          +Y  ++   + + LT        AS++    D SQ
Sbjct: 99  YPIRYFPNDERVLFTKDSGGNERYHVYVREVD-GSIKDLT--PGEETRASFAGFTKDGSQ 155

Query: 316 IVFESD-REGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--- 370
               S+ R+ K   LY + S       + Q+ +        SP G  IA +K +  K   
Sbjct: 156 FFITSNQRDAKFMDLYRVDSKTYKVTPVYQNTQGLDVG-AISPDGRYIALSKNNTNKDSD 214

Query: 371 -FAIGVMKKDGSQERLLV--EDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NG 425
            F +   KK   + +L+   +      P T+S   + L +S    G+  S+++  +L  G
Sbjct: 215 TFILDTYKK-TLKPQLISKHDTPAQYTPETFSVDSKYLYYSTDAKGEF-SEVWQYELATG 272

Query: 426 RN 427
           ++
Sbjct: 273 KH 274



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 4/135 (2%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SP   +++  SD  G   LY +      + R++  ++++Y    + P  + + FTK S
Sbjct: 58  SFSPTGDKVLVSSDESGIYSLYEVDVKTGSKTRLTNFEDSTYPIRYF-PNDERVLFTKDS 116

Query: 368 GEK--FAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           G    + + V + DGS + L   E++      ++  G     +  +       LY +D  
Sbjct: 117 GGNERYHVYVREVDGSIKDLTPGEETRASFAGFTKDGSQFFITSNQRDAKFMDLYRVDSK 176

Query: 425 GRNETLINTPAYASD 439
               T +       D
Sbjct: 177 TYKVTPVYQNTQGLD 191



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 41/105 (39%), Gaps = 3/105 (2%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS 400
           +     S     +SP GD +  +      +++  +      +  L    +   P  + P+
Sbjct: 47  TFFDTTSIMGSSFSPTGDKVLVSSDESGIYSLYEVDVKTGSKTRLTNFEDSTYPIRYFPN 106

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
              ++F++   G+    +Y  +++G  + L  TP   +   + GF
Sbjct: 107 DERVLFTKDSGGNERYHVYVREVDGSIKDL--TPGEETRASFAGF 149



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/338 (13%), Positives = 109/338 (32%), Gaps = 81/338 (23%)

Query: 112 VTGRVIKEGKDRLRVE------FRLW--DVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
           + G       D++ V       + L+  DVK   +     F  S    R   +       
Sbjct: 54  IMGSSFSPTGDKVLVSSDESGIYSLYEVDVKTGSKTRLTNFEDSTYPIRYFPN------- 106

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                     + R+LF  +S   G  +  + V + DG+ I+ LTP  +       F+ + 
Sbjct: 107 ----------DERVLFTKDSG--GNERYHVYVREVDGS-IKDLTPGEETRASFAGFTKDG 153

Query: 224 QKVAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEA 281
            +    +   D   + +Y +D++  +      N + + +    S +G+   +S    ++ 
Sbjct: 154 SQFFITSNQRDAKFMDLYRVDSKTYKVTPVYQNTQGLDVG-AISPDGRYIALSKNNTNKD 212

Query: 282 MDIYSVDLQSNATE-RLT---NTLFINISASYSPDSSQIVFESD---------------- 321
            D + +D      + +L    +T       ++S DS  + + +D                
Sbjct: 213 SDTFILDTYKKTLKPQLISKHDTPAQYTPETFSVDSKYLYYSTDAKGEFSEVWQYELATG 272

Query: 322 ------------------REGKEQLYVMQSNGSDQKRI--SQDKE---------ASYFDP 352
                             + G+ Q+  + ++ S +  +  +Q  +          +    
Sbjct: 273 KHSPALKDDWDVSFIDFSKSGRYQVSGVNADASTKVTVKDTQTGDEIAMPKLPAGNLRGV 332

Query: 353 VWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVED 389
            +S     +AF          + V +   ++ + L   
Sbjct: 333 NFSSDEKTMAFYLNSDTSPSNLFVWQVGSNEAKQLTNT 370


>gi|284097430|ref|ZP_06385538.1| WD40 domain protein beta Propeller [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283831059|gb|EFC35061.1| WD40 domain protein beta Propeller [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 162

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 66/143 (46%), Gaps = 7/143 (4%)

Query: 264 RFSSNGKRALISVQKDEAMD-IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            +S N KR   S+ +   ++ +Y +D+++   E LT  L  +    ++PD ++I+F    
Sbjct: 5   SWSPNSKRIAFSLSRPGWLEHLYLLDVETKEIELLT-ELHKDFYPVWAPDGNRILFLRWN 63

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              +  Y +       + +    +A+ +   WSP+GD IA++++     ++ +      +
Sbjct: 64  REFDTFYTIDIETKTIEALFDVDKATGYWADWSPEGDYIAYSRWG----SVYLYDFATDE 119

Query: 383 ERLLVE-DSNLQAPTWSPSGRSL 404
             ++VE D ++    W   G  L
Sbjct: 120 TEVMVEVDGSVFVIAWLRDGDVL 142



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 60/145 (41%), Gaps = 8/145 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SPN +++A++      +  +YL+D             +     P ++ +G R L    
Sbjct: 5   SWSPNSKRIAFSLSRPGWLEHLYLLDVETKEIELLTELHK--DFYPVWAPDGNRILFLRW 62

Query: 278 KDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             E    Y++D+++   E L +        A +SP+   I +   R G   LY   ++ +
Sbjct: 63  NREFDTFYTIDIETKTIEALFDVDKATGYWADWSPEGDYIAYS--RWGSVYLYDFATDET 120

Query: 337 DQKRISQDKEASYFDPVWSPQGDLI 361
           +   +  + + S F   W   GD++
Sbjct: 121 E---VMVEVDGSVFVIAWLRDGDVL 142



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 5/104 (4%)

Query: 308 SYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           S+SP+S +I F   R G  E LY++     + + +++  +   F PVW+P G+ I F ++
Sbjct: 5   SWSPNSKRIAFSLSRPGWLEHLYLLDVETKEIELLTELHK--DFYPVWAPDGNRILFLRW 62

Query: 367 SGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSR 408
           + E      +  +      L  V+ +      WSP G  + +SR
Sbjct: 63  NREFDTFYTIDIETKTIEALFDVDKATGYWADWSPEGDYIAYSR 106



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 5/81 (6%)

Query: 349 YFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           ++   WSP    IAF+    G    + ++  +  +  LL E      P W+P G  ++F 
Sbjct: 1   FWGMSWSPNSKRIAFSLSRPGWLEHLYLLDVETKEIELLTELHKDFYPVWAPDGNRILFL 60

Query: 408 R-KKDGDTGSKLYSIDLNGRN 427
           R  ++ DT    Y+ID+  + 
Sbjct: 61  RWNREFDTF---YTIDIETKT 78



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 31/111 (27%), Gaps = 16/111 (14%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            F P ++P+  ++ +  + + +    Y +D             ++      +S  G    
Sbjct: 45  DFYPVWAPDGNRILFLRW-NREFDTFYTIDIETKTIEALFDVDKATGYWADWSPEGDYIA 103

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S        +Y  D  +                    D S  V    R+G
Sbjct: 104 YS----RWGSVYLYDFAT-----------DETEVMVEVDGSVFVIAWLRDG 139


>gi|188993604|ref|YP_001905614.1| Aminopeptidase, probable [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167735364|emb|CAP53578.1| Aminopeptidase, probable [Xanthomonas campestris pv. campestris]
          Length = 815

 Score = 79.7 bits (195), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 84/214 (39%), Gaps = 17/214 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATE---RLT 298
            + +RA +   +      A  +S +G+   + ++  +  D +   VDL     +   RL+
Sbjct: 348 LKGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDLDDAKLQPRHRLS 407

Query: 299 NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++ +IN   +   + PD+  +   S+  G  QLY +  NG   +R           PV S
Sbjct: 408 DSAWINWGFNEFGWLPDNRTLWLLSEESGYSQLYTVDGNGKPCQR--TRGTFEVSAPVPS 465

Query: 356 PQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  + F   +     + +  +     Q   +     ++  + SP+G+ ++  R     
Sbjct: 466 ADGSGMFFLCNRKWPGDYEVCKLDLRTDQLSEVTALDGVEDFSLSPNGQQVL-VRYSGSY 524

Query: 414 TGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
              +L  +   G   T++    T A+ + P W+ 
Sbjct: 525 LPPQLAVVPAAGGQATVLTDTRTAAFKAQP-WIA 557



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 54/369 (14%), Positives = 105/369 (28%), Gaps = 85/369 (23%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +D   ++ +  +         R  A T        +T    +  SR  F S+        
Sbjct: 120 YDAGRQRMLFARNGDIFLRDLRSGALT-------QLT-RSNEVESRPQFASDGGAIWRAG 171

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPN-----QQKVAYATYDDEDILRVYLMDTR 245
           N+      DG   +      ++   +P  +P      +Q++A       D  +   + T+
Sbjct: 172 NNWYHWRADGGTAQVAVVKAER---DPNAAPKADVLREQQLATLATLRRDREQREALRTQ 228

Query: 246 IDRAPKRIGNFRSM---------ILAPRFSSNGKRALISVQKDEAMD------------- 283
            D   +                 I+    S +G+  L+  Q   A +             
Sbjct: 229 DDAWRRADSTRAPAPVYLGDEVEIVDSALSPDGRHLLVVTQAKGADEGQEGKMPKYITES 288

Query: 284 ---------------------IYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFES 320
                                ++ VD+ + +   L+      I            +    
Sbjct: 289 GYEEFQEVRTRVGRNAPVAHALWLVDVTAGSARALSFDPLPGIATDP--------LAALR 340

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKK 378
               K+        G+   R+  D + S     WS  G  +A        +   I  +  
Sbjct: 341 KAAKKD-----PLKGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDL 395

Query: 379 DGSQER---LLVED----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           D ++ +    L +            W P  R+L    ++ G   S+LY++D NG+     
Sbjct: 396 DDAKLQPRHRLSDSAWINWGFNEFGWLPDNRTLWLLSEESG--YSQLYTVDGNGKPCQRT 453

Query: 432 NTPAYASDP 440
                 S P
Sbjct: 454 RGTFEVSAP 462



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 79/220 (35%), Gaps = 41/220 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFR--SMILA-PRFSSNGKRAL 273
            +  + ++V Y    +   +R  Y        A +R+ +     +  A P + +  +R L
Sbjct: 69  WWQWDGKQVQYQLKREGSPVRDTYRQPAAGGTAAERVADTARAGLDAANPSYDAGRQRML 128

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +   D    I+  DL+S A  +LT +  +     ++ D   I     R G    Y  ++
Sbjct: 129 FARNGD----IFLRDLRSGALTQLTRSNEVESRPQFASDGGAIW----RAGNN-WYHWRA 179

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL------- 386
           +G   +      E    DP  +P+ D++       +   +  +++D  Q   L       
Sbjct: 180 DGGTAQVAVVKAE---RDPNAAPKADVL----REQQLATLATLRRDREQREALRTQDDAW 232

Query: 387 --VEDSNLQAPTW------------SPSGRSLIFSRKKDG 412
              + +   AP +            SP GR L+   +  G
Sbjct: 233 RRADSTRAPAPVYLGDEVEIVDSALSPDGRHLLVVTQAKG 272


>gi|117922370|ref|YP_871562.1| peptidase S9 prolyl oligopeptidase [Shewanella sp. ANA-3]
 gi|117614702|gb|ABK50156.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sp. ANA-3]
          Length = 681

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/317 (16%), Positives = 99/317 (31%), Gaps = 68/317 (21%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTR 245
                 L   D +G N R +T  +   + EP FSP+ + +A+ +  + +D  ++YL+   
Sbjct: 67  DKGSTQLWRFDGEGKNNRAITA-KGLKVSEPVFSPDGKTLAFISERNDDDAGQIYLLPMD 125

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALI------------------------------- 274
                 ++ +  + +   ++   GK                                   
Sbjct: 126 GPGEASKLTDIPTGVNGIKW--VGKHLYFISNIFPEQNWEQMKAQLKTDKDNKVSARQWN 183

Query: 275 ---------SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQI 316
                     + +     ++ +     A E +T  L   +             SPD   I
Sbjct: 184 ALPYSQFDHWLDERRQAHVFRIPATGGAVEAVTQPLGHEL-PRSSQSSSSYDISPDERLI 242

Query: 317 VFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            F +            L++    GS  + I+ D  A   +P +SP G  +AFT+     F
Sbjct: 243 AFSAYGSDNRVDPKLDLFLATIGGSKAENITPDNPAPDLNPTFSPNGKTLAFTRQKIPGF 302

Query: 372 -----AIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + ++     +   L  D +       W+P  +   F    D    +++Y ID  
Sbjct: 303 YADTARLMLLDVSSRKLTTLTADWDRSVSQFEWTPDSKG--FYASIDDAATNRIYHIDAK 360

Query: 425 GRNETLINTPAYASDPQ 441
                 I      S P 
Sbjct: 361 SGKAKAITQATDYSQPA 377



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 66/177 (37%), Gaps = 14/177 (7%)

Query: 266 SSNGKRALISV-----QKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFE 319
           S + +    S      + D  +D++   +  +  E +T +    +++ ++SP+   + F 
Sbjct: 236 SPDERLIAFSAYGSDNRVDPKLDLFLATIGGSKAENITPDNPAPDLNPTFSPNGKTLAFT 295

Query: 320 SDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             +         +L ++  +      ++ D + S     W+P       +        I 
Sbjct: 296 RQKIPGFYADTARLMLLDVSSRKLTTLTADWDRSVSQFEWTPDSKGFYASIDDAATNRIY 355

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETL 430
            +     + + + + ++   P  +  G+ +     +     ++L SI+  NG+ E L
Sbjct: 356 HIDAKSGKAKAITQATDYSQPAIAKDGQLIA--TNQSFLYPARLVSINPRNGKTERL 410



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 96/295 (32%), Gaps = 70/295 (23%)

Query: 217 PRFSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  S   + +      Y   +D+   +++  D    +  + I      +  P FS +GK 
Sbjct: 46  PVVSSTGEHIIAPVTEYDLKEDKGSTQLWRFDGE-GKNNRAITAKGLKVSEPVFSPDGKT 104

Query: 272 ALISVQK--DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-------- 320
                ++  D+A  IY + +       +LT+         +      + F S        
Sbjct: 105 LAFISERNDDDAGQIYLLPMDGPGEASKLTDIPTGVNGIKWV--GKHLYFISNIFPEQNW 162

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQDKEA- 347
                                           D   +  ++ + + G   + ++Q     
Sbjct: 163 EQMKAQLKTDKDNKVSARQWNALPYSQFDHWLDERRQAHVFRIPATGGAVEAVTQPLGHE 222

Query: 348 ------SYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLVED--SNLQA 394
                 S      SP   LIAF+ +  +        + +    GS+   +  D  +    
Sbjct: 223 LPRSSQSSSSYDISPDERLIAFSAYGSDNRVDPKLDLFLATIGGSKAENITPDNPAPDLN 282

Query: 395 PTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
           PT+SP+G++L F+R+K        ++L  +D++ R  T +        S  +W  
Sbjct: 283 PTFSPNGKTLAFTRQKIPGFYADTARLMLLDVSSRKLTTLTADWDRSVSQFEWTP 337



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 12/215 (5%)

Query: 174 NSRILFVSESVVSGII--KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           + R++  S       +  K  L +    G+    +TP        P FSPN + +A+   
Sbjct: 238 DERLIAFSAYGSDNRVDPKLDLFLATIGGSKAENITPDNPAPDLNPTFSPNGKTLAFTRQ 297

Query: 232 DDEDIL----RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                     R+ L+D    +      ++   +    ++ + K    S+       IY +
Sbjct: 298 KIPGFYADTARLMLLDVSSRKLTTLTADWDRSVSQFEWTPDSKGFYASIDDAATNRIYHI 357

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D +S   + +T         + + D   I          +L  +       +R+ Q  + 
Sbjct: 358 DAKSGKAKAITQATDY-SQPAIAKDGQLIATNQSFLYPARLVSINPRNGKTERLEQFNDE 416

Query: 348 SYFDPVWSPQGDL--IAFTKFSGEKFAIGVMKKDG 380
              D      G    + +  + G+   + V    G
Sbjct: 417 ILKDVDL---GTYESVTYKGYQGQDIQMWVHYPPG 448



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 67/247 (27%), Gaps = 64/247 (25%)

Query: 260 ILAPRFSSNGKRAL-----ISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +P  SS G+  +       +++D  +  ++  D +      +T          +SPD 
Sbjct: 43  IGSPVVSSTGEHIIAPVTEYDLKEDKGSTQLWRFDGEGKNNRAITAKGLKVSEPVFSPDG 102

Query: 314 SQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
             + F S+R  +   Q+Y++  +G  +     D         W   G  + F        
Sbjct: 103 KTLAFISERNDDDAGQIYLLPMDGPGEASKLTDIPTGVNGIKWV--GKHLYFISNIFPEQ 160

Query: 367 -----------------------------------SGEKFAIGVMKKDGSQERLLVEDSN 391
                                                 +  +  +   G     + +   
Sbjct: 161 NWEQMKAQLKTDKDNKVSARQWNALPYSQFDHWLDERRQAHVFRIPATGGAVEAVTQPLG 220

Query: 392 LQAPT---------WSPSGRSLIFS---RKKDGDTGSKLYSIDLNGRNETLIN--TPAYA 437
            + P           SP  R + FS        D    L+   + G     I    PA  
Sbjct: 221 HELPRSSQSSSSYDISPDERLIAFSAYGSDNRVDPKLDLFLATIGGSKAENITPDNPAPD 280

Query: 438 SDPQWVG 444
            +P +  
Sbjct: 281 LNPTFSP 287


>gi|51892847|ref|YP_075538.1| hypothetical protein STH1709 [Symbiobacterium thermophilum IAM
           14863]
 gi|51856536|dbj|BAD40694.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 341

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 88/268 (32%), Gaps = 32/268 (11%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +       ++ +    + +    G  +R LT         P + P+ + +A+      D 
Sbjct: 78  VWSPDGREIAFMRDGQILLTTPQGRPVRVLTTQPGAWDAGPVWRPDGRALAFVRLSTRDG 137

Query: 237 LRVYLM-----DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
               ++         D  P  + +    I    +  +G R   +        I  + + S
Sbjct: 138 GAQVMLLPVPPGNAPDGKPVALTSEPGAIGYLAWDHSGDRLYYTT----NDRIVRIAVPS 193

Query: 292 NATERLTNTLF----INISASYSPDSSQIVFESD-REGK---EQLYVMQSNGSDQKRISQ 343
              E +         I+   + + D   ++F    R G     +LY +   G + +R++ 
Sbjct: 194 GRKEEIFRAPEGWELISGGLAVAQDGRWLLFGGGPRTGTGVEYELYRLPLEGGEPERLTS 253

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPS 400
                   P   P G L+A+         I V+     + R ++ D   +    P +SP 
Sbjct: 254 GGG---IMPGLHPGGRLVAYRNPRATT-GIYVLDLATKEARRVLPDDARAMFFHPHFSPD 309

Query: 401 GRSLIFSRKK--------DGDTGSKLYS 420
           G  L+ SR +         G   S +Y 
Sbjct: 310 GTKLLVSRLRLAPAQQRARGGFTSNIYV 337



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 62/171 (36%), Gaps = 29/171 (16%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              LT T  ++  A +SPD  +I F  D     Q+ +    G   + ++    A    PV
Sbjct: 64  LTPLTQTAAMDGFAVWSPDGREIAFMRD----GQILLTTPQGRPVRVLTTQPGAWDAGPV 119

Query: 354 WSPQGDLIAFTKFSGEKFAIGVM--------KKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           W P G  +AF + S       VM          DG    L  E   +    W  SG  L 
Sbjct: 120 WRPDGRALAFVRLSTRDGGAQVMLLPVPPGNAPDGKPVALTSEPGAIGYLAWDHSGDRLY 179

Query: 406 FSRKKDGDTGSKLYSIDL-NGRNETLINTP----------AYASDPQWVGF 445
           ++         ++  I + +GR E +   P          A A D +W+ F
Sbjct: 180 YTTN------DRIVRIAVPSGRKEEIFRAPEGWELISGGLAVAQDGRWLLF 224



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 94/283 (33%), Gaps = 34/283 (12%)

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI--------- 162
           V      EG+ R   E+        +      F       R+IA      I         
Sbjct: 44  VPASAGPEGEGRPEAEWAARLTPLTQTAAMDGFAVWSPDGREIAFMRDGQILLTTPQGRP 103

Query: 163 YQSITGEKGDFNSR---------ILFVSESVVSGIIKNSLCVMDR----DGANIRYLTPS 209
            + +T + G +++          + FV  S   G  +  L  +      DG  +     S
Sbjct: 104 VRVLTTQPGAWDAGPVWRPDGRALAFVRLSTRDGGAQVMLLPVPPGNAPDGKPV--ALTS 161

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    +  +  ++ Y T D   I+R+ +   R +   +    +  +      + +G
Sbjct: 162 EPGAIGYLAWDHSGDRLYYTTND--RIVRIAVPSGRKEEIFRAPEGWELISGGLAVAQDG 219

Query: 270 KRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           +  L             ++Y + L+    ERLT+   I       P    + + + R   
Sbjct: 220 RWLLFGGGPRTGTGVEYELYRLPLEGGEPERLTSGGGI--MPGLHPGGRLVAYRNPRA-T 276

Query: 326 EQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFS 367
             +YV+     + +R+  D   A +F P +SP G  +  ++  
Sbjct: 277 TGIYVLDLATKEARRVLPDDARAMFFHPHFSPDGTKLLVSRLR 319


>gi|77747590|ref|NP_299539.2| alanyl dipeptidyl peptidase [Xylella fastidiosa 9a5c]
          Length = 688

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 83/258 (32%), Gaps = 37/258 (14%)

Query: 214 LFEPRFSPNQQKVAYA-------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   + +A              + V  +      AP R+      + AP FS
Sbjct: 35  VSSPELSPDGAVLVFAKRQMDAKYIKASTSVWVQRLQAGTSAAPVRLTPLGWDVSAPVFS 94

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y + +    + +LTN      S   SP   +IVF +   G  
Sbjct: 95  RDGKAVYFLSAKSGSHQLYVLPVSGGTSRQLTNLAVDIDSYKLSPQGDRIVFSA---GVF 151

Query: 327 QLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIG 374
           Q+     +           +    +  ++        W+       F           + 
Sbjct: 152 QVCGSDLSCTKRKLDEKKNAKASGVVFEQLFVRHWDTWNDGRRNTLFIASLPAVGAKPVS 211

Query: 375 VMK-----KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLN 424
           V+       DG                WSP G S++ S +  G      T   LY  D++
Sbjct: 212 VVSAMSAMLDGDVPSKPF--GGADHFVWSPDGHSVVASIRVAGRQEPWSTNFDLYRFDVS 269

Query: 425 GRNETLINTPAYASDPQW 442
           G +  +  T   A++P W
Sbjct: 270 GHDAPVNLT---AANPAW 284



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 58/175 (33%), Gaps = 11/175 (6%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQ 223
                D +S +  +  +           L   D  G +    LT +       P FS + 
Sbjct: 235 FVWSPDGHSVVASIRVAGRQEPWSTNFDLYRFDVSGHDAPVNLTAANPAWDATPMFSADG 294

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + + Y          D   +  M+ +  +  +   ++         S++GK   ++    
Sbjct: 295 KMLYYRAMRRPGFEADRFGLMEMEVQSGKVREIAPHWDRSADEIALSADGKALYVNADDH 354

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQS 333
               ++ VD+ S   E+      ++     +    ++ F  +  +  +Q++V  +
Sbjct: 355 GEHPLFKVDIASGKVEKWVGEGSVHA-PVLA--GGKLAFARNSLKSADQIFVTDA 406


>gi|172038487|ref|YP_001804988.1| WD repeat-containing protein [Cyanothece sp. ATCC 51142]
 gi|171699941|gb|ACB52922.1| WD-repeat protein [Cyanothece sp. ATCC 51142]
          Length = 1171

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/269 (18%), Positives = 102/269 (37%), Gaps = 34/269 (12%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           I H   D +        G +          + +     ++ + ++ G   + +    +  
Sbjct: 557 IGHQ--DAVNSVSFSPDGQW----------IATASSDGTVRLWNQQGQ-QKVILNGHEGN 603

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++   FSP+ Q +A A  D  D  R++ +     +    +    + + +  FS +G+R  
Sbjct: 604 IYGVAFSPDSQTLATAAQD--DTARIWDLQ---GKQLAVLKGHTASVYSVTFSQDGQRLA 658

Query: 274 ISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +  +D    I+  D Q N    L  +T  ++  A +S D   I   + R+G  +L+   
Sbjct: 659 -TTSRDNTARIW--DRQGNPLVVLQGHTRSVDDVA-FSTDGQYIA-TASRDGTAKLW--D 711

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSN 391
           + G+  K + Q+     +   +SP G  IA     G    + +  K G+    L      
Sbjct: 712 NQGNLIKSL-QEDAIPVYSISFSPDGQRIAAGARDGT---VKIWDKQGNLTLTLKGHQEL 767

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + +  +S  G  +        D  ++L+S
Sbjct: 768 VNSVVFSRDGNWIA---SGSSDGTARLWS 793



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/258 (17%), Positives = 90/258 (34%), Gaps = 61/258 (23%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
             I  +  +  RI    K IG+  ++  +  FS +G+    +                  
Sbjct: 538 SPISAIEQILNRIQEKNKLIGHQDAVN-SVSFSPDGQWIATASSDGTVRLWNQQGQQKVI 596

Query: 278 ------------------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                                   +D+   I+  DLQ      L        S ++S D 
Sbjct: 597 LNGHEGNIYGVAFSPDSQTLATAAQDDTARIW--DLQGKQLAVLKGHTASVYSVTFSQDG 654

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            ++   S R+   +++       +   + Q    S  D  +S  G  IA     G     
Sbjct: 655 QRLATTS-RDNTARIW---DRQGNPLVVLQGHTRSVDDVAFSTDGQYIATASRDGTA--- 707

Query: 374 GVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLY------SIDLNGR 426
            +    G+  + L ED+  + + ++SP G+ +  +  +DG    K++      ++ L G 
Sbjct: 708 KLWDNQGNLIKSLQEDAIPVYSISFSPDGQRIA-AGARDGTV--KIWDKQGNLTLTLKG- 763

Query: 427 NETLINTPAYASDPQWVG 444
           ++ L+N+  ++ D  W+ 
Sbjct: 764 HQELVNSVVFSRDGNWIA 781



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/353 (14%), Positives = 121/353 (34%), Gaps = 45/353 (12%)

Query: 89  QKITNPDSIPRFQDWNSLGAQ-VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
           Q +         + W+  G Q  ++ G           V F     +D +++      ++
Sbjct: 614 QTLATAAQDDTARIWDLQGKQLAVLKGHTASV----YSVTFS----QDGQRLATTSRDNT 665

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
              W +  + +      + + +   F++   +++ +   G  K    + D  G N+    
Sbjct: 666 ARIWDRQGNPLVVLQGHTRSVDDVAFSTDGQYIATASRDGTAK----LWDNQG-NLIKSL 720

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                 ++   FSP+ Q++A    D    ++++     +    K     + ++ +  FS 
Sbjct: 721 QEDAIPVYSISFSPDGQRIAAGARD--GTVKIWDKQGNLTLTLK---GHQELVNSVVFSR 775

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G     S   D    ++S   Q      L          + S   +++   +  +G  +
Sbjct: 776 DGNWIA-SGSSDGTARLWS--NQGQEMTVLKGHQDPIYDVALSRQGTELA-TASSDGTVK 831

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL- 386
           L+ ++   ++        +       +S  G L+A    SG    + +    G + +   
Sbjct: 832 LWAVRQTPNNG---FNTLDTYVTSADFSQDGQLLAIADESG---RVYLWNLQGKKLQEFE 885

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDG---------------DTGSKLYSIDLN 424
             +S + A   SP+G+ +  +    G               D   ++YS+D N
Sbjct: 886 AHNSGINAIRISPNGKIIATTGNNGGVKLWNLQGQLLGELKDDNVRIYSLDFN 938



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 91/294 (30%), Gaps = 48/294 (16%)

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
            Q++         + W+  G  ++V     +   D   V F      D + I       +
Sbjct: 654 GQRLATTSRDNTARIWDRQGNPLVVLQGHTRSVDD---VAFS----TDGQYIATASRDGT 706

Query: 148 PASWRKIAHTI------SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
              W    + I      +  +Y       G          + + +G    ++ + D+ G 
Sbjct: 707 AKLWDNQGNLIKSLQEDAIPVYSISFSPDG----------QRIAAGARDGTVKIWDKQG- 755

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N+        +++    FS +   +A  + D    L      +   +    +   +  I 
Sbjct: 756 NLTLTLKGHQELVNSVVFSRDGNWIASGSSDGTARLW-----SNQGQEMTVLKGHQDPIY 810

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI------SASYSPDSSQ 315
               S  G     +   D  + +++V        R T     N       SA +S D   
Sbjct: 811 DVALSRQGTELA-TASSDGTVKLWAV--------RQTPNNGFNTLDTYVTSADFSQDGQL 861

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +   +D  G  ++Y+    G   +   +   +       SP G +IA T  +G 
Sbjct: 862 LA-IADESG--RVYLWNLQGKKLQEF-EAHNSGINAIRISPNGKIIATTGNNGG 911



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 97/312 (31%), Gaps = 70/312 (22%)

Query: 160  DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            D IY      +G         + S    +   ++     +G N      + D  +    F
Sbjct: 807  DPIYDVALSRQGTE-----LATASSDGTVKLWAVRQTPNNGFN------TLDTYVTSADF 855

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            S + Q +A A        RVYL + +  +  +   +   +  A R S NGK    +   +
Sbjct: 856  SQDGQLLAIADESG----RVYLWNLQGKKLQEFEAHNSGIN-AIRISPNGKIIATTGN-N 909

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--------------- 324
              + ++  +LQ      L +      S  ++ DS+ +   ++R G               
Sbjct: 910  GGVKLW--NLQGQLLGELKDDNVRIYSLDFNEDSTTLA-IANRSGEVWLWDLEINPYQLL 966

Query: 325  ------------------KEQLYVMQSNG--------SDQKRISQDKEASYFDPVWSPQG 358
                               + L     +G         + ++             +SP G
Sbjct: 967  KKFKAHDDTITHISFSQNTQNLGTASIDGTAKIWDLEGNLQQSLAGHSDPINWLSFSPNG 1026

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            D +           I +    G     L  D   +   T+SP+G+  + + +   D   +
Sbjct: 1027 DYLLTGSQDST---IKLWNPTGDLIATLKSDLFPISRVTFSPNGQYFLTASQ---DGTVR 1080

Query: 418  LYSIDLNGRNET 429
            L+  D  G+  T
Sbjct: 1081 LW--DREGKLHT 1090



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 64/165 (38%), Gaps = 10/165 (6%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            ++++ +  I  +  + D +G N++         +    FSPN   +   + D      + 
Sbjct: 985  TQNLGTASIDGTAKIWDLEG-NLQQSLAGHSDPINWLSFSPNGDYLLTGSQDS----TIK 1039

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            L +   D       +   +     FS NG+   ++  +D  + ++  D +     ++   
Sbjct: 1040 LWNPTGDLIATLKSDLFPISR-VTFSPNGQY-FLTASQDGTVRLW--DREGKLHTKMKGH 1095

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                 S  ++P++  I+    R+GK +++ +++  +    +    
Sbjct: 1096 QESLESLQFTPNNQTIL-TIGRDGKVKMWPVEAEYARLTSLLNQG 1139


>gi|268315663|ref|YP_003289382.1| WD40 domain-containing protein beta Propeller [Rhodothermus marinus
           DSM 4252]
 gi|262333197|gb|ACY46994.1| WD40 domain protein beta Propeller [Rhodothermus marinus DSM 4252]
          Length = 352

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 53/264 (20%), Positives = 94/264 (35%), Gaps = 44/264 (16%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            N L ++ RDG  +R+L PS         +SP+ +++A  TY+      V+++   ++  
Sbjct: 71  PNQLWLVHRDGRKMRFLGPSIGSAD----WSPDGKRLA-LTYEPGLCCDVHVVTLDLESG 125

Query: 250 PKRIGNF-------RSMILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATE-- 295
              +                P +  +G+R L+SV            IY ++L     E  
Sbjct: 126 QVVVWTGADTLLLSHPTASFPHWFQDGQRLLVSVIGKAYGQLYETGIYVLNLVHRQVEGP 185

Query: 296 --------RLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK- 345
                   +L      +  A    P     V+      +E     +        ++    
Sbjct: 186 LVKSMVGAQL---GGRDRFAVGIMPQPQGRVY------RENAVRYEFATGALTVLTDFGP 236

Query: 346 -EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            EA  F    SP  DLI   +       + +M   G   R L E      P WS  GR++
Sbjct: 237 EEAYRFAVSPSPVEDLIVLERRVEGVPQLFLMDGKGRILRQLTERGGHN-PRWSYDGRAV 295

Query: 405 IFSRKKDGDTGSK----LYSIDLN 424
           +F R  +   G++    +Y +D +
Sbjct: 296 LFLRDVEAGPGARNVPFVYWLDED 319



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 16/108 (14%)

Query: 348 SYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           + ++   SP G+ +A  +            + ++ +DG + R L    ++ +  WSP G+
Sbjct: 44  NLYNLRLSPDGEWVALIRAYTPERLDPPNQLWLVHRDGRKMRFL--GPSIGSADWSPDGK 101

Query: 403 SLIFSRKKDGDTGSKLYSIDL--------NGRNETLINTPAYASDPQW 442
            L  + +        + ++DL         G +  L++ P  AS P W
Sbjct: 102 RLALTYEPGLCCDVHVVTLDLESGQVVVWTGADTLLLSHPT-ASFPHW 148


>gi|170115908|ref|XP_001889147.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635937|gb|EDR00238.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1487

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/247 (21%), Positives = 97/247 (39%), Gaps = 22/247 (8%)

Query: 181  SESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            S+ +VSG    +L V D   G ++       D  +    FSP+ + +A  ++D    +RV
Sbjct: 1102 SKHIVSGSNDRTLRVWDALTGLSVMGPLRGHDAEVRSVAFSPDGRYIASGSHDC--TVRV 1159

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATERLT 298
            +   T  +      G+ + ++ +  FS +G+    S   D+ + ++ ++  QS     + 
Sbjct: 1160 WDAFTGQNVIDPLKGHDK-VVTSVAFSPDGRYIT-SGSWDKTVRVWNTLTGQSVLDSFIG 1217

Query: 299  NTLFINISASYSPDSSQIVFES-DREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSP 356
            +T FI+ S S+SPD   I+  S DR     + V  +  G          +       +SP
Sbjct: 1218 HTDFIH-SVSFSPDGKLIISGSEDRT----IRVWDALTGQSIMNPLIGHKRGVNTVAFSP 1272

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  I           + V      Q     L   D  + +  +SP G+ ++       D
Sbjct: 1273 DGRYIVSGSHDKT---VRVWDFSTGQSVMDPLKSHDGWVYSVAFSPDGKYIVSGSY---D 1326

Query: 414  TGSKLYS 420
               +L+ 
Sbjct: 1327 KTIRLWD 1333



 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/297 (17%), Positives = 100/297 (33%), Gaps = 46/297 (15%)

Query: 116  VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            ++    DR     R+WD      ++G       A  R +A   S D              
Sbjct: 1105 IVSGSNDR---TLRVWDALTGLSVMG-PLRGHDAEVRSVA--FSPD-------------- 1144

Query: 176  RILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                    + SG    ++ V D   G N+       D+++    FSP+ + +   ++D  
Sbjct: 1145 -----GRYIASGSHDCTVRVWDAFTGQNVIDPLKGHDKVVTSVAFSPDGRYITSGSWD-- 1197

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              +RV+   T        IG     I +  FS +GK  +IS  +D  + ++  D  +  +
Sbjct: 1198 KTVRVWNTLTGQSVLDSFIG-HTDFIHSVSFSPDGK-LIISGSEDRTIRVW--DALTGQS 1253

Query: 295  ---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYF 350
                 + +   +N  A +SPD   IV  S     + + V   +         +  +   +
Sbjct: 1254 IMNPLIGHKRGVNTVA-FSPDGRYIVSGSH---DKTVRVWDFSTGQSVMDPLKSHDGWVY 1309

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSL 404
               +SP G  I    +      I +               + +   +  +S  GR +
Sbjct: 1310 SVAFSPDGKYIVSGSYDKT---IRLWDGVTGHSVGGPFKGHCEAVLSVVFSCDGRHI 1363



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 90/295 (30%), Gaps = 43/295 (14%)

Query: 116  VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            V   G   + V    WD      I+          ++  AH  S   Y            
Sbjct: 807  VSGSGGGAIHV----WDALTGHNIM---------DFKGHAHYASSVAYSPTGKH------ 847

Query: 176  RILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                    ++SG    ++ + D   G  +       D  +    FSP+   +   + D  
Sbjct: 848  --------IISGSWDKTIKIWDVLTGQCVMGPLEGHDHWVVSVAFSPDGGHIVSGSNDK- 898

Query: 235  DILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + + DT   ++           I +  +S +G+  + S   D  + I+  D  +  
Sbjct: 899  ---TIRVWDTLTGQSVMDPLRGHGDWITSVAYSPSGRHIV-SGSHDCTVRIW--DAGTGQ 952

Query: 294  --TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               + L          +YSPD   IV  S+    E + V  +       +          
Sbjct: 953  CLMDPLIGHGKGVYCVAYSPDGMNIVSGSN---DETIRVWDALSGQSVMVLFRGSDPINT 1009

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLI 405
              +SP G  I                 +      LV+D  ++    +SP+G+ +I
Sbjct: 1010 VAFSPDGKHII-CATGNRIIRFWNALTNHCMLSPLVDDECSVFTVAFSPNGKHII 1063



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 75/231 (32%), Gaps = 21/231 (9%)

Query: 185  VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VSG    ++ V D   G NI               +SP  + +   ++D      + + D
Sbjct: 807  VSGSGGGAIHVWDALTGHNIMD-FKGHAHYASSVAYSPTGKHIISGSWDK----TIKIWD 861

Query: 244  TRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                +     +      +++  FS +G   + S   D+ + ++      +  + L     
Sbjct: 862  VLTGQCVMGPLEGHDHWVVSVAFSPDGGHIV-SGSNDKTIRVWDTLTGQSVMDPLRGHGD 920

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ---KRISQDKEASYFDPVWSPQGD 359
               S +YSP    IV  S       + +  +          I   K    +   +SP G 
Sbjct: 921  WITSVAYSPSGRHIVSGSH---DCTVRIWDAGTGQCLMDPLIGHGK--GVYCVAYSPDGM 975

Query: 360  LIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSN-LQAPTWSPSGRSLIFSR 408
             I           I V     G    +L   S+ +    +SP G+ +I + 
Sbjct: 976  NIVSGSNDET---IRVWDALSGQSVMVLFRGSDPINTVAFSPDGKHIICAT 1023



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 63/200 (31%), Gaps = 30/200 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--KRIGNFRSMILAPRFSSNGKRALISV 276
           F+P   K+  + +  +  ++   ++    +    + +   +       +S +G+  + S 
Sbjct: 753 FAPQNSKI--SLHFMKHFVKTLTIENGQMKQWPDRCLLKIKGGNGPLAYSPDGRHIV-SG 809

Query: 277 QKDEAMDIY-------SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
               A+ ++        +D +               S +YSP    I+  S     + + 
Sbjct: 810 SGGGAIHVWDALTGHNIMDFKG--------HAHYASSVAYSPTGKHIISGS---WDKTIK 858

Query: 330 VMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---L 385
           +     G       +  +       +SP G  I           I V      Q     L
Sbjct: 859 IWDVLTGQCVMGPLEGHDHWVVSVAFSPDGGHIVSGSNDKT---IRVWDTLTGQSVMDPL 915

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
                 + +  +SPSGR ++
Sbjct: 916 RGHGDWITSVAYSPSGRHIV 935


>gi|256389448|ref|YP_003111012.1| cell wall binding repeat 2-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256355674|gb|ACU69171.1| cell wall binding repeat 2-containing protein [Catenulispora
           acidiphila DSM 44928]
          Length = 663

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 88/263 (33%), Gaps = 33/263 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S +  L +  +SP+  K+A       +  R  +  + ID+    + +   M+  P ++
Sbjct: 73  LSSLNGTLSDLAWSPDGTKIAAVLTHGSNQQRALIAYSLIDQTVTTVEDGIPMLADPSWT 132

Query: 267 SNGKRALIS----VQKDEAMDIYSV-DLQSNATERLTNTLFI--NISASYSPDSSQIVFE 319
           ++G   L +     Q++    ++++  +      RL         I  S  P    +VF 
Sbjct: 133 ADGSTILFAAAGGAQRNGLEVLWAISPVAGAVEHRLLPNEPNCQEIEPSAGP-GGAVVFT 191

Query: 320 SDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFA 372
                    G    Y +  +       +   +A  F P  SP G  I +         + 
Sbjct: 192 RTPYLTCDGGNGIGYSVNGHT------TVIGQAQDFHPALSPDGRTIVYCHQDVATGYYQ 245

Query: 373 IGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +          +         +PT       +SP G ++ F       TG +L ++ + G
Sbjct: 246 LYRSAIVNGVPQ--PGTPLPGSPTMVTGDLVFSPDGSAVAFHVFTG--TGPQLATMPVAG 301

Query: 426 RNETLINTPAYA-SDPQWVGFMD 447
            N   ++ P  +     W    D
Sbjct: 302 GNPVYLSWPGASTGRLSWQPLFD 324



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 60/197 (30%), Gaps = 19/197 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYD--DEDILRVYLMDTRIDRAP--KRIGNFRS-M 259
                   +L +P ++ +   + +A       + L V    + +  A   + + N  +  
Sbjct: 117 TTVEDGIPMLADPSWTADGSTILFAAAGGAQRNGLEVLWAISPVAGAVEHRLLPNEPNCQ 176

Query: 260 ILAPRFSSNGKRAL----ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + P     G                   YSV+  +    +       +   + SPD   
Sbjct: 177 EIEPSAGPGGAVVFTRTPYLTCDGGNGIGYSVNGHTTVIGQ-----AQDFHPALSPDGRT 231

Query: 316 IVFESD--REGKEQLYVMQSNGSDQKRISQDKEAS---YFDPVWSPQGDLIAFTKFSGEK 370
           IV+       G  QLY         +  +    +      D V+SP G  +AF  F+G  
Sbjct: 232 IVYCHQDVATGYYQLYRSAIVNGVPQPGTPLPGSPTMVTGDLVFSPDGSAVAFHVFTGTG 291

Query: 371 FAIGVMKKDGSQERLLV 387
             +  M   G     L 
Sbjct: 292 PQLATMPVAGGNPVYLS 308


>gi|78186131|ref|YP_374174.1| WD-40 repeat-containing protein [Chlorobium luteolum DSM 273]
 gi|78166033|gb|ABB23131.1| WD-40 repeat-containing protein [Chlorobium luteolum DSM 273]
          Length = 335

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 83/241 (34%), Gaps = 23/241 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   +++ + D       ++    D  +    FSP+ + +A  + D      + L D  
Sbjct: 109 SGSTDSTVRIWDASNGQCLHVCKGHDTAVRMVAFSPDGKTLASCSRDT----TIRLWDVE 164

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +   +S I    +S +G++ +      E   I   D  S   + + N    + 
Sbjct: 165 SGACRSVLNGHKSYIECLAYSHDGQKLV---SCGEEPVIKLWDAASG--KNIANYETGDT 219

Query: 306 -SAS--YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            S +  +SPD   I          ++ ++ ++     R+ +    +     +SP G  +A
Sbjct: 220 LSHTVLFSPDDRTIALA---GRNSKIRILDASDGSLIRVLEGHHDAVRGLAYSPDGHYLA 276

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
                     + +      +         L+  +   SP G+++        D   KL++
Sbjct: 277 SVSNDES---LRLWNTADGRHLHTYRGHVLEVQSVDISPDGKTIATGSD---DRKIKLWA 330

Query: 421 I 421
           +
Sbjct: 331 L 331


>gi|119962812|ref|YP_946516.1| hypothetical protein AAur_0714 [Arthrobacter aurescens TC1]
 gi|119949671|gb|ABM08582.1| conserved hypothetical protein [Arthrobacter aurescens TC1]
          Length = 239

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 18/166 (10%)

Query: 262 APRFS--SNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIV 317
           AP ++  S G    + +  D    ++++D+         LT    +N     +PD   I 
Sbjct: 35  APNWTLTSKGSGHALVLNGDG--KLWTLDVTGGHPVEVPLTGIPDLNNDHVLAPDGESI- 91

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----AI 373
           F S  +G   +Y    +G    RI+ D  + +F    SP G  +A+       F     +
Sbjct: 92  FLSANDG--HIYRASLSGGPATRITDDDGSFHFLHGVSPDGKELAYVGIEAGDFTQPGRL 149

Query: 374 GVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +  DG    R+ V   +   P +SP G+ L     ++G    +L
Sbjct: 150 MTIASDGGAIARVDVGSGHCDGPEYSPDGKWLY----RNGRPPRRL 191



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 33/126 (26%), Gaps = 11/126 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI--LRVYLMDTRIDRAP 250
           +      G     +T       F    SP+ +++AY   +  D       +       A 
Sbjct: 100 IYRASLSGGPATRITDDDGSFHFLHGVSPDGKELAYVGIEAGDFTQPGRLMTIASDGGAI 159

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            R+         P +S +GK       ++                R      ++ S  Y 
Sbjct: 160 ARVDVGSGHCDGPEYSPDGKWLY----RNGRPPRRLA-----GRRRPCFDRGLDHSPPYM 210

Query: 311 PDSSQI 316
               + 
Sbjct: 211 ATFRRP 216


>gi|9107416|gb|AAF85059.1|AE004038_8 alanyl dipeptidyl peptidase [Xylella fastidiosa 9a5c]
          Length = 709

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 83/258 (32%), Gaps = 37/258 (14%)

Query: 214 LFEPRFSPNQQKVAYA-------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   + +A              + V  +      AP R+      + AP FS
Sbjct: 56  VSSPELSPDGAVLVFAKRQMDAKYIKASTSVWVQRLQAGTSAAPVRLTPLGWDVSAPVFS 115

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y + +    + +LTN      S   SP   +IVF +   G  
Sbjct: 116 RDGKAVYFLSAKSGSHQLYVLPVSGGTSRQLTNLAVDIDSYKLSPQGDRIVFSA---GVF 172

Query: 327 QLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIG 374
           Q+     +           +    +  ++        W+       F           + 
Sbjct: 173 QVCGSDLSCTKRKLDEKKNAKASGVVFEQLFVRHWDTWNDGRRNTLFIASLPAVGAKPVS 232

Query: 375 VMK-----KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLN 424
           V+       DG                WSP G S++ S +  G      T   LY  D++
Sbjct: 233 VVSAMSAMLDGDVPSKPF--GGADHFVWSPDGHSVVASIRVAGRQEPWSTNFDLYRFDVS 290

Query: 425 GRNETLINTPAYASDPQW 442
           G +  +  T   A++P W
Sbjct: 291 GHDAPVNLT---AANPAW 305



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 58/175 (33%), Gaps = 11/175 (6%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQ 223
                D +S +  +  +           L   D  G +    LT +       P FS + 
Sbjct: 256 FVWSPDGHSVVASIRVAGRQEPWSTNFDLYRFDVSGHDAPVNLTAANPAWDATPMFSADG 315

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + + Y          D   +  M+ +  +  +   ++         S++GK   ++    
Sbjct: 316 KMLYYRAMRRPGFEADRFGLMEMEVQSGKVREIAPHWDRSADEIALSADGKALYVNADDH 375

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQS 333
               ++ VD+ S   E+      ++     +    ++ F  +  +  +Q++V  +
Sbjct: 376 GEHPLFKVDIASGKVEKWVGEGSVHA-PVLA--GGKLAFARNSLKSADQIFVTDA 427


>gi|16331266|ref|NP_441994.1| beta transducin-like-protein [Synechocystis sp. PCC 6803]
 gi|3123058|sp|Q55563|Y163_SYNY3 RecName: Full=Uncharacterized WD repeat-containing protein sll0163
 gi|1001440|dbj|BAA10064.1| beta transducin-like protein [Synechocystis sp. PCC 6803]
          Length = 1693

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 50/314 (15%), Positives = 102/314 (32%), Gaps = 52/314 (16%)

Query: 109  QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            Q +VTG   K          +LW+V  +K  + +    +  + R                
Sbjct: 1396 QWIVTGSADKTA--------QLWNVLGKKLTVLRGHQDAVLNVR---------------- 1431

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                F+    ++  +   G  +    V +  G     +    ++ +F   FS + Q +  
Sbjct: 1432 ----FSPDSQYIVTASKDGTAR----VWNNTG-RELAVLRHYEKNIFAAEFSADGQFIVT 1482

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            A+ D  +   ++ +  R     +        +   +FS++ +  L +   D    I+  D
Sbjct: 1483 ASDD--NTAGIWEIVGREVGICR---GHEGPVYFAQFSADSRYIL-TASVDNTARIW--D 1534

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                    L     I   A +SP+ + I   S     +    +         +    +  
Sbjct: 1535 FLGRPLLTLAGHQSIVYQARFSPEGNLIATVS----ADHTARLWDRSGKTVAVLYGHQGL 1590

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFS 407
                 WSP G ++      G      +    G +   L    N  ++  +SP GR ++ S
Sbjct: 1591 VGTVDWSPDGQMLVTASNDGTA---RLWDLSGRELLTLEGHGNWVRSAEFSPDGRWVLTS 1647

Query: 408  RKKDGDTGSKLYSI 421
                 D  +KL+ +
Sbjct: 1648 S---ADGTAKLWPV 1658



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 53/306 (17%), Positives = 102/306 (33%), Gaps = 54/306 (17%)

Query: 75   RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLG---------AQVLVTGRVIKEGKDRLR 125
            R   F+        Q I    +    Q WN LG            ++  R       +  
Sbjct: 1387 REGQFSPD-----GQWIVTGSADKTAQLWNVLGKKLTVLRGHQDAVLNVRFSP--DSQYI 1439

Query: 126  VEF------RLWDVKDRKQIIGKK------FFSSPASWRKIAHTISDD----IYQSITGE 169
            V        R+W+    +++   +      F +  ++  +   T SDD    I++ +  E
Sbjct: 1440 VTASKDGTARVWN-NTGRELAVLRHYEKNIFAAEFSADGQFIVTASDDNTAGIWEIVGRE 1498

Query: 170  KGD---FNSRILFVSESVVS-----GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
             G        + F   S  S       + N+  + D  G            I+++ RFSP
Sbjct: 1499 VGICRGHEGPVYFAQFSADSRYILTASVDNTARIWDFLG-RPLLTLAGHQSIVYQARFSP 1557

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
                +A  + D    L       R  +    +   + ++    +S +G+  + +   D  
Sbjct: 1558 EGNLIATVSADHTARLW-----DRSGKTVAVLYGHQGLVGTVDWSPDGQMLV-TASNDGT 1611

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
              ++  DL       L        SA +SPD    V  S  +G  +L+ ++   +  + +
Sbjct: 1612 ARLW--DLSGRELLTLEGHGNWVRSAEFSPDGRW-VLTSSADGTAKLWPVK---TLPQLL 1665

Query: 342  SQDKEA 347
            SQ  + 
Sbjct: 1666 SQGGQW 1671



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 84/233 (36%), Gaps = 21/233 (9%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                    +    F+P   ++   + D     R++   T        + + +  +   +F
Sbjct: 1337 TLTGHSHWVRNAHFNPKGDRLLTVSRD--KTARLW---TTEGECVAVLADHQGWVREGQF 1391

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S +G+  + +   D+   ++  ++       L       ++  +SPDS  IV  + ++G 
Sbjct: 1392 SPDGQWIV-TGSADKTAQLW--NVLGKKLTVLRGHQDAVLNVRFSPDSQYIV-TASKDGT 1447

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             +++   +N   +  + +  E + F   +S  G  I             ++ ++    R 
Sbjct: 1448 ARVW---NNTGRELAVLRHYEKNIFAAEFSADGQFIVTASDDNTAGIWEIVGREVGICR- 1503

Query: 386  LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
               +  +    +S   R ++ +     D  ++++  D  GR   L+    + S
Sbjct: 1504 -GHEGPVYFAQFSADSRYILTASV---DNTARIW--DFLGRP--LLTLAGHQS 1548



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 86/260 (33%), Gaps = 21/260 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +     +  + D +G     L       +   +FSP+ Q +   + D     R++ +   
Sbjct: 1154 TASRDGTARLWDLEG-REIGLCQGHTSWVRNAQFSPDGQWIVTCSAD--GTARLWDL--- 1207

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +    +   ++ +    +S +G+   I+   D    ++S          L        
Sbjct: 1208 SSQCFAVLKGHQNWVNNALWSPDGQHI-ITSSSDGTARVWS--RHGKCLGTLRGHDHNIH 1264

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             A +S D  +IV     +   +L+  +        I +  +   +D  +S  G  +    
Sbjct: 1265 GARFSLDGQKIV-TYSTDNTARLWTKE---GTLLTILRGHQKEVYDADFSADGRFVFTVS 1320

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                     + +KD     L      ++   ++P G  L+   +   D  ++L++    G
Sbjct: 1321 ADQTARQWDISQKDT--ITLTGHSHWVRNAHFNPKGDRLLTVSR---DKTARLWT--TEG 1373

Query: 426  R-NETLINTPAYASDPQWVG 444
                 L +   +  + Q+  
Sbjct: 1374 ECVAVLADHQGWVREGQFSP 1393



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 58/151 (38%), Gaps = 13/151 (8%)

Query: 271  RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            + L++  +D    ++  DL+               +A +SPD   IV  S  +G  +L+ 
Sbjct: 1150 QILLTASRDGTARLW--DLEGREIGLCQGHTSWVRNAQFSPDGQWIVTCS-ADGTARLWD 1206

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVED 389
            +    S    + +  +    + +WSP G  I  +   G      V  + G     L   D
Sbjct: 1207 LS---SQCFAVLKGHQNWVNNALWSPDGQHIITSSSDGTA---RVWSRHGKCLGTLRGHD 1260

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             N+    +S  G+ ++       D  ++L++
Sbjct: 1261 HNIHGARFSLDGQKIV---TYSTDNTARLWT 1288



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 76/219 (34%), Gaps = 25/219 (11%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            +     + +    +S + Q  A A+ D      V L   R       +      + +  F
Sbjct: 1050 VLRGHQEAITALDWSADGQYFATASADH----TVKLWQ-RHGEEVATLRGHEDWVRSVHF 1104

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDR 322
            S    + L++  +D    I+  +      E+LT          +A ++    QI+  + R
Sbjct: 1105 SP-HHQFLVTSGQDNTARIW--NFAG---EQLTLCQGHADWVRNAEFNCHG-QILLTASR 1157

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            +G  +L+     G +   + Q   +   +  +SP G  I      G      +       
Sbjct: 1158 DGTARLW--DLEGREI-GLCQGHTSWVRNAQFSPDGQWIVTCSADGTA---RLWDLSSQC 1211

Query: 383  ERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYS 420
              +L    N      WSP G+ +I S     D  ++++S
Sbjct: 1212 FAVLKGHQNWVNNALWSPDGQHIITSSS---DGTARVWS 1247


>gi|89100146|ref|ZP_01173014.1| hypothetical protein B14911_14335 [Bacillus sp. NRRL B-14911]
 gi|89085112|gb|EAR64245.1| hypothetical protein B14911_14335 [Bacillus sp. NRRL B-14911]
          Length = 349

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/276 (16%), Positives = 97/276 (35%), Gaps = 45/276 (16%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------ILRVYLMDTRIDRAPKRIGN 255
           N    +    +++ +P FS +   +++ + + +          ++++D    +       
Sbjct: 72  NAEAFSLDSSRMILDPSFSYDGSLLSFISTNKQQDEDTAFKTTIHILDLSTKQVTDAFTE 131

Query: 256 FRSMILAPRFSSNGKRALI------------SVQKDEAMDIYSVDLQSNATERLTNTLFI 303
              +I    FS                    + ++   +D++S +      +++T+    
Sbjct: 132 NE-LITETEFSPVDDTLYYLRAGTFQNYSPIASKRPHDLDVWSFNPAEGEHKQITDLKSY 190

Query: 304 NI-SASYSPDSSQIVFE--SDREG----------KEQLYVMQSNGSDQKRISQDKEA--S 348
           ++ S   SP     VF    D +G          K++++ +  +  D  +I+ D +    
Sbjct: 191 SMHSLQLSP-GENSVFIQMDDDQGADTPEETFEVKQRIFEIPIDNPDSMKIAGDPDRKMD 249

Query: 349 YFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDS-NLQAPTWSPSG 401
            FD  +SP G+ + F   S         + +  M  D  +E  L         P +S  G
Sbjct: 250 VFDFTFSPDGNTMIFQSISNSDEGGTYEYELYKMDVDSGEEAQLTHLGEYTDRPVFSADG 309

Query: 402 RSLIFS---RKKDGDTGSKLYSIDLNGRNETLINTP 434
             + F    R   G     LY + LNG+    I  P
Sbjct: 310 DRVYFMVDKRFAKGSPEYHLYCVKLNGKEIEKIELP 345



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 94/276 (34%), Gaps = 61/276 (22%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             +AY  Y D     +     +   A     +   MIL P FS +G          +  +
Sbjct: 48  NTIAYVNYKDGKPSLMLYNKEKDINAEAFSLDSSRMILDPSFSYDGSLLSFISTNKQQDE 107

Query: 284 -------IYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVF------------ESD 321
                  I+ +DL +   +++T+    N       +SP    + +             S 
Sbjct: 108 DTAFKTTIHILDLST---KQVTDAFTENELITETEFSPVDDTLYYLRAGTFQNYSPIASK 164

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK----------- 370
           R     ++       + K+I+  K  S      SP G+   F +   ++           
Sbjct: 165 RPHDLDVWSFNPAEGEHKQITDLKSYSMHSLQLSP-GENSVFIQMDDDQGADTPEETFEV 223

Query: 371 ----FAIGVMKKD-----GSQERLLVEDSNLQAPTWSPSGRSLIF----SRKKDGDTGSK 417
               F I +   D     G  +R +    ++   T+SP G ++IF    +  + G    +
Sbjct: 224 KQRIFEIPIDNPDSMKIAGDPDRKM----DVFDFTFSPDGNTMIFQSISNSDEGGTYEYE 279

Query: 418 LYSIDLNGRNETLINT-------PAYASDPQWVGFM 446
           LY +D++   E  +         P +++D   V FM
Sbjct: 280 LYKMDVDSGEEAQLTHLGEYTDRPVFSADGDRVYFM 315


>gi|152999809|ref|YP_001365490.1| peptidase S41 [Shewanella baltica OS185]
 gi|151364427|gb|ABS07427.1| peptidase S41 [Shewanella baltica OS185]
          Length = 1094

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/297 (16%), Positives = 113/297 (38%), Gaps = 36/297 (12%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---- 228
           +  R+ F+S+S  +      L  M  DG++ + LT  +D  +   +    Q KV +    
Sbjct: 226 WQDRLYFISDSDGNDN----LWSMALDGSDTKQLTQFKDWQVRGAQM--GQGKVVFQQGA 279

Query: 229 --ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN----GKRALISVQKDEAM 282
               +D        L         +R  ++    +    S++    G + +I+ +     
Sbjct: 280 DIHVFDIAAAKDALLNIELTSDFAQRREHWVKDPMDYASSTDLALAGDKVVITAR----S 335

Query: 283 DIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKR 340
            +    +  +   ++     +    A  S D+  +   SD  G+++++   ++GS   K+
Sbjct: 336 HVAIAGVDGSRLVQVALPGTYRLREAILSQDNKSVYAISDMTGQQEIWQFPADGSSGAKQ 395

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
           +++D          S  G  IA     G    + ++    +  + ++ +     P     
Sbjct: 396 LTKDGHTLRMSLNLSSDGRFIAHDDNDG---NVWLLDLKKNTNQKIITNGEGLGPYADIR 452

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLI------NTPAYASDPQWVGFM 446
           WS   R +  ++ + G    ++    ++  + ETL        +P ++SD QW+ F+
Sbjct: 453 WSGDSRFIALTKSEIGKQRPQIVLYSVDENKAETLTRDKYESYSPTFSSDGQWLYFL 509



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 55/292 (18%), Positives = 115/292 (39%), Gaps = 33/292 (11%)

Query: 86  SFKQKITNPDSIPRFQDWNSLGAQVLVTGR---VIKEGKDRLRVEFRLWDVKDRK-QIIG 141
           S     ++   + +F+DW   GAQ    G+   V ++G D       ++D+   K  ++ 
Sbjct: 244 SMALDGSDTKQLTQFKDWQVRGAQ---MGQGKVVFQQGAD-----IHVFDIAAAKDALLN 295

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
            +  S  A  R+  H + D +  + + +      +++  + S V         +   DG+
Sbjct: 296 IELTSDFAQRRE--HWVKDPMDYASSTDLALAGDKVVITARSHV--------AIAGVDGS 345

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMI 260
            +  +       L E   S +  K  YA  D      ++          K++  +  ++ 
Sbjct: 346 RLVQVALPGTYRLREAILSQD-NKSVYAISDMTGQQEIWQFPADGSSGAKQLTKDGHTLR 404

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISA--SYSPDSSQIV 317
           ++   SS+G+        D   +++ +DL+ N  ++ +TN   +   A   +S DS  I 
Sbjct: 405 MSLNLSSDGRFIA---HDDNDGNVWLLDLKKNTNQKIITNGEGLGPYADIRWSGDSRFIA 461

Query: 318 FESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
                 GK   Q+ +   + +  + +++DK  SY  P +S  G  + F    
Sbjct: 462 LTKSEIGKQRPQIVLYSVDENKAETLTRDKYESY-SPTFSSDGQWLYFLSNR 512



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 10/154 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLT-NTLFINISASYSPDSSQIVFESDR 322
            S + K            +I+      +   ++LT +   + +S + S D     F +  
Sbjct: 363 LSQDNKSVYAISDMTGQQEIWQFPADGSSGAKQLTKDGHTLRMSLNLSSDGR---FIAHD 419

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKK 378
           +    ++++    +  ++I  + E    Y D  WS     IA TK     ++  I +   
Sbjct: 420 DNDGNVWLLDLKKNTNQKIITNGEGLGPYADIRWSGDSRFIALTKSEIGKQRPQIVLYSV 479

Query: 379 DGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
           D ++   L  D     +PT+S  G+ L F   + 
Sbjct: 480 DENKAETLTRDKYESYSPTFSSDGQWLYFLSNRQ 513



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 20/208 (9%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              T   +A  R+ +  +  L    S++GK        + A ++Y + +     +R++  
Sbjct: 53  WTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVYVIPVAGGVAKRVSFE 112

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   ++     +       G    ++++S        +    A   + V   + + 
Sbjct: 113 NSRVRVQGWTAKGEILYSTDSGFGPANNWMLRSVDPKTLTTTDLPLADAVEGVIDDRNEY 172

Query: 361 IAFTKF-------------SGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSL 404
           + FT+F              G K  +   K     E  L+    D +++ P        L
Sbjct: 173 VYFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQD--RL 230

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            F    DG     L+S+ L+G +   + 
Sbjct: 231 YFISDSDG--NDNLWSMALDGSDTKQLT 256



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 69/191 (36%), Gaps = 24/191 (12%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +  + + + D    +++  L   A  RLT+     + A+ S D   + + ++ EG  ++Y
Sbjct: 42  QTLVFTAEGD----LWTQTLGQKAATRLTSLPAEELGATISADGKWVAYVANYEGASEVY 97

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V+   G   KR+S +  +      W+ +G+ I ++  SG   A   M +    + L   D
Sbjct: 98  VIPVAGGVAKRVSFE-NSRVRVQGWTAKGE-ILYSTDSGFGPANNWMLRSVDPKTLTTTD 155

Query: 390 ---SNLQAPTWSPSGRSLIFSRK-----------KDGDTGSKLYSIDLNGRNETLI---N 432
              ++            + F+R              G    +L+   L  + E  +    
Sbjct: 156 LPLADAVEGVIDDRNEYVYFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQ 215

Query: 433 TPAYASDPQ-W 442
                  P  W
Sbjct: 216 HDGSVRQPMLW 226



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 69/213 (32%), Gaps = 25/213 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G        S          S + + VAY   + E    VY++        KR+    S 
Sbjct: 58  GQKAATRLTSLPAEELGATISADGKWVAYVA-NYEGASEVYVIPV-AGGVAKRVSFENSR 115

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQI 316
           +    +++ G   L S           + L+S   + LT T   L   +       +  +
Sbjct: 116 VRVQGWTAKG-EILYSTDSGFGPANNWM-LRSVDPKTLTTTDLPLADAVEGVIDDRNEYV 173

Query: 317 VFES------------DREG-KEQLYVMQSNG-SDQKRISQDKEASYFDPV-WSPQGDLI 361
            F               R G K +L+  +    ++ + +S   + S   P+ W    D +
Sbjct: 174 YFTRFGLQVTGDNAKVYRGGAKGELWRFKLGSKTEAQLLSGQHDGSVRQPMLWQ---DRL 230

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            F   S     +  M  DGS  + L +  + Q 
Sbjct: 231 YFISDSDGNDNLWSMALDGSDTKQLTQFKDWQV 263


>gi|24376012|ref|NP_720055.1| peptidase, putative [Shewanella oneidensis MR-1]
 gi|24351015|gb|AAN57499.1|AE015885_12 peptidase, putative [Shewanella oneidensis MR-1]
          Length = 675

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 51/316 (16%), Positives = 101/316 (31%), Gaps = 66/316 (20%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTR 245
                 L   D +G N R +T  +   + EP FSP+ + +A+ +  + +D  ++YL+   
Sbjct: 61  DKGSTQLWRFDVEGKNNRAITA-KGLKVSEPVFSPDGKTLAFISERNDDDAGQIYLLPMD 119

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALI------------------------------- 274
                 ++ +  + +   ++   GK                                   
Sbjct: 120 GPGEAAKLTDIPTGVNGIKW--VGKHLYFISNIFPEQNWEQMKAQLKTDKDNKVSARQWN 177

Query: 275 ---------SVQKDEAMDIYSVDLQSNATERLTNTLFIN------ISASY--SPDSSQIV 317
                     + +     ++ +       E +T  L          S SY  SPD   I 
Sbjct: 178 ALPYSQFDHWLDERRQAHVFRIPATGGTVEAVTQPLGHELPRSSQSSESYDISPDERLIA 237

Query: 318 FESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF- 371
           F +            L++    G+  + I+ +  A   +P +SP G  +AFT+     F 
Sbjct: 238 FSAYGSDNRVDPKLDLFLATIGGNKAENITPENPAPDLNPSFSPNGKTLAFTRQKIPGFY 297

Query: 372 ----AIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                + ++     +   L  D +  +    W+P  +   F    +    +++Y ID   
Sbjct: 298 ADTARLMLLDVSSRKLTTLTPDWDRSVSEFEWTPDSKG--FYASIEDAATNRIYHIDAKS 355

Query: 426 RNETLINTPAYASDPQ 441
                I      S P 
Sbjct: 356 GKAKAITQATDFSQPA 371



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 66/177 (37%), Gaps = 14/177 (7%)

Query: 266 SSNGKRALISV-----QKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFE 319
           S + +    S      + D  +D++   +  N  E +T      +++ S+SP+   + F 
Sbjct: 230 SPDERLIAFSAYGSDNRVDPKLDLFLATIGGNKAENITPENPAPDLNPSFSPNGKTLAFT 289

Query: 320 SDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             +         +L ++  +      ++ D + S  +  W+P       +        I 
Sbjct: 290 RQKIPGFYADTARLMLLDVSSRKLTTLTPDWDRSVSEFEWTPDSKGFYASIEDAATNRIY 349

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETL 430
            +     + + + + ++   P  +  G+ +     +     ++L SI+  NG+ E L
Sbjct: 350 HIDAKSGKAKAITQATDFSQPAIAKDGQLIA--TNQSFLYPARLVSINPRNGKTERL 404



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 99/296 (33%), Gaps = 72/296 (24%)

Query: 217 PRFSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  S   + +      Y   +D+   +++  D    +  + I      +  P FS +GK 
Sbjct: 40  PVVSSTGEHIIAPVTEYDLKEDKGSTQLWRFDVE-GKNNRAITAKGLKVSEPVFSPDGKT 98

Query: 272 ALISVQK--DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-------- 320
                ++  D+A  IY + +       +LT+         +      + F S        
Sbjct: 99  LAFISERNDDDAGQIYLLPMDGPGEAAKLTDIPTGVNGIKWV--GKHLYFISNIFPEQNW 156

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQ----- 343
                                           D   +  ++ + + G   + ++Q     
Sbjct: 157 EQMKAQLKTDKDNKVSARQWNALPYSQFDHWLDERRQAHVFRIPATGGTVEAVTQPLGHE 216

Query: 344 --DKEASYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLV--EDSNLQA 394
                 S      SP   LIAF+ +  +        + +    G++   +     +    
Sbjct: 217 LPRSSQSSESYDISPDERLIAFSAYGSDNRVDPKLDLFLATIGGNKAENITPENPAPDLN 276

Query: 395 PTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLINTPAY---ASDPQWVG 444
           P++SP+G++L F+R+K        ++L  +D++ R  T + TP +    S+ +W  
Sbjct: 277 PSFSPNGKTLAFTRQKIPGFYADTARLMLLDVSSRKLTTL-TPDWDRSVSEFEWTP 331



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 68/247 (27%), Gaps = 64/247 (25%)

Query: 260 ILAPRFSSNGKRAL-----ISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +P  SS G+  +       +++D  +  ++  D++      +T          +SPD 
Sbjct: 37  IGSPVVSSTGEHIIAPVTEYDLKEDKGSTQLWRFDVEGKNNRAITAKGLKVSEPVFSPDG 96

Query: 314 SQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
             + F S+R  +   Q+Y++  +G  +     D         W   G  + F        
Sbjct: 97  KTLAFISERNDDDAGQIYLLPMDGPGEAAKLTDIPTGVNGIKWV--GKHLYFISNIFPEQ 154

Query: 367 -----------------------------------SGEKFAIGVMKKDGSQERLLVEDSN 391
                                                 +  +  +   G     + +   
Sbjct: 155 NWEQMKAQLKTDKDNKVSARQWNALPYSQFDHWLDERRQAHVFRIPATGGTVEAVTQPLG 214

Query: 392 LQAPT---------WSPSGRSLIFS---RKKDGDTGSKLYSIDLNGRNETLIN--TPAYA 437
            + P           SP  R + FS        D    L+   + G     I    PA  
Sbjct: 215 HELPRSSQSSESYDISPDERLIAFSAYGSDNRVDPKLDLFLATIGGNKAENITPENPAPD 274

Query: 438 SDPQWVG 444
            +P +  
Sbjct: 275 LNPSFSP 281



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 12/215 (5%)

Query: 174 NSRILFVSESVVSGII--KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           + R++  S       +  K  L +    G     +TP        P FSPN + +A+   
Sbjct: 232 DERLIAFSAYGSDNRVDPKLDLFLATIGGNKAENITPENPAPDLNPSFSPNGKTLAFTRQ 291

Query: 232 DDEDIL----RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                     R+ L+D    +      ++   +    ++ + K    S++      IY +
Sbjct: 292 KIPGFYADTARLMLLDVSSRKLTTLTPDWDRSVSEFEWTPDSKGFYASIEDAATNRIYHI 351

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D +S   + +T         + + D   I          +L  +       +R+ Q  + 
Sbjct: 352 DAKSGKAKAITQATDF-SQPAIAKDGQLIATNQSFLYPARLVSINPRNGKTERLEQFNDD 410

Query: 348 SYFDPVWSPQGDL--IAFTKFSGEKFAIGVMKKDG 380
              D      G    + +  + G+   + V    G
Sbjct: 411 ILKDVDL---GTYESVTYKGYQGQDIQMWVHYPPG 442


>gi|219848357|ref|YP_002462790.1| WD40 domain-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219542616|gb|ACL24354.1| WD40 domain protein beta Propeller [Chloroflexus aggregans DSM
           9485]
          Length = 325

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 70/251 (27%), Gaps = 25/251 (9%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-------DILRVYLMDTRID 247
           V   +G   R L         +P F P  +++ Y             D     L     +
Sbjct: 49  VWLWEGRTARQLIA---PPATQPAFDPRGERIVYVAARAGASDLWVADGSGAMLAQLTRN 105

Query: 248 RAPKRIGNFRSMILA-----PRFSSNGKRALISVQK---------DEAMDIYSVDLQSNA 293
                 G+   +  A     P +  +G   L + Q          D    I+   L    
Sbjct: 106 DPAAPPGSIERVYAAMWAFYPVWLPDGSGVLAAAQAAPPVGDPPADAPFAIFRYALNGQR 165

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                +           P    I   +    + Q  + +  G   + +        +DP 
Sbjct: 166 QPVFADANAHIGRIVVLPSDELIAVRTVLGSEGQQQLYRIAGGQAEPL-PGAPTPAYDPA 224

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            SP G  + F         +  +   G     + +    +AP +SP G  L F     G+
Sbjct: 225 VSPDGKWVVFAVGINGGSDLYTLPAAGGSPVRITDLGTARAPVFSPDGTLLAFLAIPPGE 284

Query: 414 TGSKLYSIDLN 424
            G  LY   + 
Sbjct: 285 RGFDLYLATVT 295



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 12/107 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P      ++P  SP+ + V +A   +       L       +P RI +      AP FS
Sbjct: 213 LPGAPTPAYDPAVSPDGKWVVFAVGINGGSDLYTL--PAAGGSPVRITDL-GTARAPVFS 269

Query: 267 SNGKRALISVQKDE--AMDIY----SVDLQS---NATERLTNTLFIN 304
            +G               D+Y    +VD        + RL+    IN
Sbjct: 270 PDGTLLAFLAIPPGERGFDLYLATVTVDDTGLRLGPSRRLSTGFAIN 316


>gi|194015272|ref|ZP_03053888.1| YuxL [Bacillus pumilus ATCC 7061]
 gi|194012676|gb|EDW22242.1| YuxL [Bacillus pumilus ATCC 7061]
          Length = 656

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 99/257 (38%), Gaps = 20/257 (7%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLT-PSRDQILFEPRFSPNQQKVAYATYDDE 234
           + +F   +V       ++ +  RD            D    +P +S + +++A+     +
Sbjct: 27  KAVFTKVTVNDKKDDYNIHLWVRDEETEELSQWTFEDGKHHQPVWSKDSRQLAFILQKPK 86

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +  ++ L+ +      + +      +  P FS +G     +V    +  ++         
Sbjct: 87  EAPQLALIQSEGGG-VRTLTAVPYGVSHPVFSLDGAFIYAAVSLKPSESVH----DEKKE 141

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPV 353
           ER      +    +Y  D    +     +G+  Q+  + ++  + + ++   +  + +  
Sbjct: 142 ERDEFAPAVYDDLTYKADGRGFL-----DGRFTQIIQVDTHSEEVEAVTS-GQHHHVNHT 195

Query: 354 WSPQGDLIAFTKFSGEKFAIGVM----KKDGSQERLLVEDSNLQAPTWSPSGRSLIFS-- 407
            SP G  +A+ + + +K  I  +     ++G+ +++          +++P+G SL++   
Sbjct: 196 LSPCGKWLAYIQSNPQKPYISDVCLRSLEEGTTKKITQSSGAYSTVSFAPNGESLVYIGH 255

Query: 408 -RKKDGDTGSKLYSIDL 423
            R+    T   L+  DL
Sbjct: 256 EREFKNATFPALWLYDL 272



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 75/223 (33%), Gaps = 47/223 (21%)

Query: 259 MILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +  P +S +GK+A+ +       + D  + ++  D ++    + T     +    +S D
Sbjct: 15  SVSHPVYSPDGKKAVFTKVTVNDKKDDYNIHLWVRDEETEELSQWTFEDGKHHQPVWSKD 74

Query: 313 SSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-AFTKFSG-- 368
           S Q+ F   +     QL ++QS G   + ++         PV+S  G  I A        
Sbjct: 75  SRQLAFILQKPKEAPQLALIQSEGGGVRTLTAVPYG-VSHPVFSLDGAFIYAAVSLKPSE 133

Query: 369 ----------EKFAIGVMK-----------KDGSQERLLVEDSNLQAP------------ 395
                     ++FA  V              DG   +++  D++ +              
Sbjct: 134 SVHDEKKEERDEFAPAVYDDLTYKADGRGFLDGRFTQIIQVDTHSEEVEAVTSGQHHHVN 193

Query: 396 -TWSPSGRSLIFS-RKKDGDTGSKLYSIDL-NGRNETLINTPA 435
            T SP G+ L +          S +    L  G  + +  +  
Sbjct: 194 HTLSPCGKWLAYIQSNPQKPYISDVCLRSLEEGTTKKITQSSG 236



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 36/104 (34%), Gaps = 9/104 (8%)

Query: 348 SYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPS 400
           S   PV+SP G    FTK             + V  ++  +      ED     P WS  
Sbjct: 15  SVSHPVYSPDGKKAVFTKVTVNDKKDDYNIHLWVRDEETEELSQWTFEDGKHHQPVWSKD 74

Query: 401 GRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASDPQWV 443
            R L F  +K  +   +L  I    G   TL   P   S P + 
Sbjct: 75  SRQLAFILQKPKE-APQLALIQSEGGGVRTLTAVPYGVSHPVFS 117


>gi|170111432|ref|XP_001886920.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164638278|gb|EDR02557.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1128

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 76/239 (31%), Gaps = 30/239 (12%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F   +  +   +     +  L + D DGA                 FSP+ + +   + D
Sbjct: 779 FQKTMTVMMGQMEHWSERCFLRIADHDGAVKSV------------AFSPDGRHIVSGSDD 826

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
               +RV+   T        +      + +  FS +G+   IS   D+ + ++  D Q+ 
Sbjct: 827 --KTVRVWDAQTGQTVM-HPLKGHEDHVTSVAFSPDGRHI-ISGSDDKTVRVW--DAQTG 880

Query: 293 ATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASY 349
                 L    F   S ++SPD   IV  S     + + +  +          +   A  
Sbjct: 881 QEVMDPLKGHEFWVKSVAFSPDGRHIVSGSC---DKTVRLWDAQTGQSVMHPLKGHHAWV 937

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLI 405
               +SP G  I           + V      Q     L      + +  +SP  R ++
Sbjct: 938 TSVTFSPDGRYIVSGSCDKT---VRVWDAQTGQSVMHPLKGHHGWVASVAFSPDSRHIV 993



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 73/225 (32%), Gaps = 17/225 (7%)

Query: 163  YQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFS 220
            +  I    G   S         +VSG    ++ V D + G  + +     +  +    FS
Sbjct: 798  FLRIADHDGAVKSVAFSPDGRHIVSGSDDKTVRVWDAQTGQTVMHPLKGHEDHVTSVAFS 857

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+ + +   + D    +RV+   T  +      G+    + +  FS +G+  + S   D+
Sbjct: 858  PDGRHIISGSDD--KTVRVWDAQTGQEVMDPLKGHEF-WVKSVAFSPDGRHIV-SGSCDK 913

Query: 281  AMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             + ++  D Q+       L        S ++SPD   IV  S     + + V  +     
Sbjct: 914  TVRLW--DAQTGQSVMHPLKGHHAWVTSVTFSPDGRYIVSGSC---DKTVRVWDAQTGQS 968

Query: 339  K-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                 +          +SP    I           + V      Q
Sbjct: 969  VMHPLKGHHGWVASVAFSPDSRHIVSGSCDNT---VRVWDAQTGQ 1010



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 62/183 (33%), Gaps = 35/183 (19%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            GR I  G D   V  R+WD +  ++++               H                +
Sbjct: 860  GRHIISGSDDKTV--RVWDAQTGQEVMD----------PLKGHEF--------------W 893

Query: 174  NSRILFVSESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
               + F  +    VSG    ++ + D + G ++ +        +    FSP+ + +   +
Sbjct: 894  VKSVAFSPDGRHIVSGSCDKTVRLWDAQTGQSVMHPLKGHHAWVTSVTFSPDGRYIVSGS 953

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             D    +RV+   T        +      + +  FS + +  + S   D  + ++  D Q
Sbjct: 954  CD--KTVRVWDAQTGQSVM-HPLKGHHGWVASVAFSPDSRHIV-SGSCDNTVRVW--DAQ 1007

Query: 291  SNA 293
            +  
Sbjct: 1008 TGQ 1010


>gi|288927878|ref|ZP_06421725.1| prolyl oligopeptidase family protein [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288330712|gb|EFC69296.1| prolyl oligopeptidase family protein [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 707

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 79/234 (33%), Gaps = 63/234 (26%)

Query: 266 SSNGKRALI-----SVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GK  +      SVQ++     ++  +      +RLT T      A++  +  +I F 
Sbjct: 42  SPDGKLVVYRVAYYSVQENKGHHMLFVSNADGTNKKRLTTTADNETDAAWIENGRRIAFL 101

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +    K QL+ M  +GSD+K+++           +SP G  +   K       I     D
Sbjct: 102 T----KGQLWSMNPDGSDRKQLTH-SATDIEGFKFSPDGKKVVLVKSIKYTGVIQANPTD 156

Query: 380 -----GSQERLL-------------------------VEDSNL------QAP-------- 395
                G +   L                          E  ++      + P        
Sbjct: 157 LPKATGRKVTDLMYRHWDHYVESIQHPFVADVQADGITEGKDMLEGEPYECPMEPFGGVE 216

Query: 396 --TWSPSGRSLIFS-RKKDGD-----TGSKLYSIDLNGRNETLINTPAYASDPQ 441
              WSP  +++ ++ RKK G      T S +Y  +L     T +  PA    P 
Sbjct: 217 QLAWSPDSKTIAYTCRKKTGREYSISTDSDIYLYELATGKTTNLCKPADYKAPA 270



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 92/314 (29%), Gaps = 85/314 (27%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           + +T    +        +   ++ + K  L  M+ DG++ + LT S   I    +FSP+ 
Sbjct: 77  KRLTTTADNETDAAWIENGRRIAFLTKGQLWSMNPDGSDRKQLTHSATDIEGF-KFSPDG 135

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--------------------------- 256
           +KV          +             +++ +                            
Sbjct: 136 KKVVLVKSIKYTGVIQANPTDLPKATGRKVTDLMYRHWDHYVESIQHPFVADVQADGITE 195

Query: 257 ----------------RSMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSN 292
                              +    +S + K    + +K            DIY  +L + 
Sbjct: 196 GKDMLEGEPYECPMEPFGGVEQLAWSPDSKTIAYTCRKKTGREYSISTDSDIYLYELATG 255

Query: 293 ATERL-------------TNTL--------------FINISASYSPDSSQIVFES-DREG 324
            T  L             T +L                +++  +SPD   + ++S  R+G
Sbjct: 256 KTTNLCKPADYKAPAVDATKSLRNQAVNRQAKDYNVGYDVNPQFSPDGKYVAWQSMKRDG 315

Query: 325 ----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
               + +L +      +++ +++  +++  D  W+     + F         +      G
Sbjct: 316 CESDRNRLCIYTLATGEKRYVTESFDSNVDDYCWAANSQTLYFIGVWHGCVNMYQTNLVG 375

Query: 381 SQERLLVEDSNLQA 394
              + L E  +  A
Sbjct: 376 KVMQ-LTEGWHDYA 388



 Score = 40.0 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 5/107 (4%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSM 259
           R            P+FSP+ + VA+ +        D  R+ +             +F S 
Sbjct: 284 RQAKDYNVGYDVNPQFSPDGKYVAWQSMKRDGCESDRNRLCIYTLATGEKRYVTESFDSN 343

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +    +++N +           +++Y  +L      +LT       S
Sbjct: 344 VDDYCWAANSQTLYFIGVWHGCVNMYQTNLVGKVM-QLTEGWHDYAS 389


>gi|302889896|ref|XP_003043833.1| hypothetical protein NECHADRAFT_48128 [Nectria haematococca mpVI
           77-13-4]
 gi|256724751|gb|EEU38120.1| hypothetical protein NECHADRAFT_48128 [Nectria haematococca mpVI
           77-13-4]
          Length = 1105

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 82/242 (33%), Gaps = 19/242 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
              +    +    FSP+ + +   +YD      V + D       + I      I +  F
Sbjct: 606 TLDNHHNSIRSLAFSPDGKMLISGSYDR----TVKIWDIATGDLGRLIKGHDDNIRSVAF 661

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREG 324
           S +GK    S  +D+ + I+  D+ + A  R L        S  +S   S +   S+   
Sbjct: 662 SPDGKLMA-SGSRDKTIKIW--DVATGALARTLKGHRSGVGSVVFSTGGSLVASGSE--- 715

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +   +     +  +    S +    S    L+A +     +  I        + R
Sbjct: 716 DNTIKIWDVSSGKAMKTLKGHTGSVWSVTLSADSKLLA-SGSDDTRVKIW--DATTGKVR 772

Query: 385 LLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
              E   +++++  +S  GR +  S   DG  G  ++   +N    T+       +   +
Sbjct: 773 QTFEGHWNSVRSVAFSMDGRLVA-SGSSDGTIG--IWDTTINRERRTVGAHGKDVTSMAF 829

Query: 443 VG 444
             
Sbjct: 830 SP 831



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 87/228 (38%), Gaps = 15/228 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D    ++  L    D  +    FSP+ + +A  + D      + + D  
Sbjct: 628 SGSYDRTVKIWDIATGDLGRLIKGHDDNIRSVAFSPDGKLMASGSRDK----TIKIWDVA 683

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + +   RS + +  FS+ G   + S  +D  + I+ V     A + L        
Sbjct: 684 TGALARTLKGHRSGVGSVVFSTGG-SLVASGSEDNTIKIWDVS-SGKAMKTLKGHTGSVW 741

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S + S DS  +   SD     ++ +  +     ++  +    S     +S  G L+A   
Sbjct: 742 SVTLSADSKLLASGSD---DTRVKIWDATTGKVRQTFEGHWNSVRSVAFSMDGRLVASGS 798

Query: 366 FSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKD 411
             G    IG+     ++ER  V     ++ +  +SP+ R L+ S   D
Sbjct: 799 SDGT---IGIWDTTINRERRTVGAHGKDVTSMAFSPN-RKLMASGSYD 842



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 107/336 (31%), Gaps = 49/336 (14%)

Query: 113 TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            G V+      L          ++WDV   K +  K       S                
Sbjct: 698 VGSVVFSTGGSLVASGSEDNTIKIWDVSSGKAM--KTLKGHTGS---------------- 739

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                 ++  +   S+ + SG     + + D     +R         +    FS + + V
Sbjct: 740 -----VWSVTLSADSKLLASGSDDTRVKIWDATTGKVRQTFEGHWNSVRSVAFSMDGRLV 794

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A  + D      + + DT I+R  + +G     + +  FS N ++ + S   DE + I+ 
Sbjct: 795 ASGSSDG----TIGIWDTTINRERRTVGAHGKDVTSMAFSPN-RKLMASGSYDETVKIW- 848

Query: 287 VDLQSNATERLTN--TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
            D  +   ++ T      +  S ++S D++ +   S         +       +  +   
Sbjct: 849 -DTATGEVKQ-TCKGHTSLITSVAFSADNALVASGSF---DMTTIIWDVGTGKRLLVLTG 903

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRS 403
                F   +S    L+A     G    I +        +   E     Q+ ++S +G+ 
Sbjct: 904 HTILVFSVAFSRDSKLVASGSELGT---IKIWDTKTGGIKKTFEGHGRTQSISFSNNGKL 960

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +I       D   +++ +      +TLI        
Sbjct: 961 IISGSD---DGTVRIWDLTAGTILQTLIGHGDGVRS 993


>gi|256391003|ref|YP_003112567.1| hypothetical protein Caci_1805 [Catenulispora acidiphila DSM 44928]
 gi|256357229|gb|ACU70726.1| Putative cell wall-binding domain-like protein [Catenulispora
           acidiphila DSM 44928]
          Length = 688

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 74/192 (38%), Gaps = 19/192 (9%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI--------NISASYSPDS 313
           +P FS +G RA+   +   +  +++ +        L              +++  +  D 
Sbjct: 81  SPVFSPDGTRAVFMDETTGS--LWTSNADGTGARLLDKATGPIVDGVDPADLAPQWL-DD 137

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           S IVFE +  G    + ++++GS                V+ P G L+A  + +G  F I
Sbjct: 138 STIVFERNNGGGY--FQIKADGSGLTAYKAPG-GLQGQLVFGPGG-LVAGIQNNGYTFTI 193

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLIN 432
            +     S    +    N  + ++SP G+ +  +    G   +++   +++G    TL +
Sbjct: 194 SIFDPATSTVATV---PNADSISFSPDGKKIAHTVYGGGHGTAQIVVANIDGTSPTTLTH 250

Query: 433 TPAYASDPQWVG 444
               A  P W  
Sbjct: 251 VAGSAFGPVWSP 262



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 73/258 (28%), Gaps = 25/258 (9%)

Query: 194 CVMDRDGANIRYLTPSR-----DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++ DG+    +TPS            P FSP+  +  +       +       T    
Sbjct: 54  YAVNPDGSGKHIVTPSGGGFDPSDATPSPVFSPDGTRAVFMDETTGSLWTSNADGTGARL 113

Query: 249 APKRIG----NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             K  G          LAP++  +    +           + +    +          + 
Sbjct: 114 LDKATGPIVDGVDPADLAPQW-LDDSTIVFERNNGGGY--FQIKADGSGLTAYKAPGGLQ 170

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P    +    +      + +     S     +     +     +SP G  IA T
Sbjct: 171 GQLVFGP-GGLVAGIQNNGYTFTISIFDPATS-----TVATVPNADSISFSPDGKKIAHT 224

Query: 365 KFSGEK--FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKK----DGDTGSK 417
            + G      I V   DG+    L     +   P WSP G  + F  +      G   + 
Sbjct: 225 VYGGGHGTAQIVVANIDGTSPTTLTHVAGSAFGPVWSPDGTEIAFQEQTWTAASGWGTNN 284

Query: 418 LYSIDLNGRNETLINTPA 435
           L  +   G +   I T A
Sbjct: 285 LDVVPAAGGDPKAIITDA 302



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 78/233 (33%), Gaps = 32/233 (13%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRY-------LTPSRDQILFEPRFSPNQQKVA 227
           +R +F+ E+  S      L   + DG   R        +    D     P++  +   + 
Sbjct: 89  TRAVFMDETTGS------LWTSNADGTGARLLDKATGPIVDGVDPADLAPQW-LDDSTIV 141

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +   +     ++    + +       G    ++  P     G              I   
Sbjct: 142 FERNNGGGYFQIKADGSGLTAYKAPGGLQGQLVFGP-----GGLVAGIQNNGYTFTISIF 196

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDK 345
           D  ++    + N   I    S+SPD  +I       G    Q+ V   +G+    ++   
Sbjct: 197 DPATSTVATVPNADSI----SFSPDGKKIAHTVYGGGHGTAQIVVANIDGTSPTTLTHVA 252

Query: 346 EASYFDPVWSPQGDLIAF-----TKFSG-EKFAIGVMKKDGSQERLLVEDSNL 392
             S F PVWSP G  IAF     T  SG     + V+   G   + ++ D+ +
Sbjct: 253 -GSAFGPVWSPDGTEIAFQEQTWTAASGWGTNNLDVVPAAGGDPKAIITDATI 304


>gi|297623843|ref|YP_003705277.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Truepera radiovictrix DSM 17093]
 gi|297165023|gb|ADI14734.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Truepera radiovictrix DSM 17093]
          Length = 666

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 93/291 (31%), Gaps = 71/291 (24%)

Query: 218 RFSPNQQKVAYATYDDEDILR--------------------VYLMDTRIDRAPKRIGNFR 257
           R SPN ++        +   +                    ++L DT      +++    
Sbjct: 20  RLSPNGRRAVAVHTTIQTPPKDREEAAPDANAEAAPRYVSHLFLYDTAAAGRAQQLTQAG 79

Query: 258 SMILAPRFSSNGKRALISVQKD-----EAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                PRFS  G       ++      E   ++ + L      RLT+         + P 
Sbjct: 80  DANTHPRFSPKGDAVAFLSKRGSPGEAEGAQLHLLPLAGGEARRLTDLPAGVTEFCWHPG 139

Query: 313 SSQIVFES--------------DR------------EGKEQLYVMQSNGSDQKRISQDKE 346
              +   S              DR             G  Q+Y+   +G +  ++++  +
Sbjct: 140 GELLALVSQGERDTAKGRPRVIDRMFYKGDGVGFRPSGSAQIYLCDLSG-EVTKLTKL-Q 197

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEK---------FAIGVMKKDGSQER------LLVEDSN 391
           +S    V++P G  + FT    E+         + + +    G   +      ++   + 
Sbjct: 198 SSPSGLVFTPDGAALLFTAAEDERAADAWQSLLWTLPLEDAKGGGYKGGRPTPVVSNLTR 257

Query: 392 LQAPTWSPSGRSLIFSR---KKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           + AP+ SP GR +       +++  T + L+   L G    L+     A+ 
Sbjct: 258 VAAPSPSPDGRFVALLSPTDQRNFGTPTGLWVAPLAGGEAQLLTGDFEATS 308



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 89/299 (29%), Gaps = 66/299 (22%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDTRIDRA 249
           L + D   A               PRFSP    VA+ +              +       
Sbjct: 61  LFLYDTAAAGRAQQLTQAGDANTHPRFSPKGDAVAFLSKRGSPGEAEGAQLHLLPLAGGE 120

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKD--------------------------EAMD 283
            +R+ +  + +    +   G+   +  Q +                           +  
Sbjct: 121 ARRLTDLPAGVTEFCWHPGGELLALVSQGERDTAKGRPRVIDRMFYKGDGVGFRPSGSAQ 180

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------SDREGKEQLYVM---QSN 334
           IY  DL S    +LT          ++PD + ++F       +    +  L+ +    + 
Sbjct: 181 IYLCDL-SGEVTKLTKLQSSPSGLVFTPDGAALLFTAAEDERAADAWQSLLWTLPLEDAK 239

Query: 335 GSDQK--RISQ--DKEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERL 385
           G   K  R +           P  SP G  +A    +     G    + V    G + +L
Sbjct: 240 GGGYKGGRPTPVVSNLTRVAAPSPSPDGRFVALLSPTDQRNFGTPTGLWVAPLAGGEAQL 299

Query: 386 LVEDS--------------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           L  D                 + P W   G S++ +  ++G +G  L  + L+GR   L
Sbjct: 300 LTGDFEATSSVAGDSRYGALPETPCW--DGESVLVNLNREGRSG--LARVSLSGRVRAL 354



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 83/259 (32%), Gaps = 73/259 (28%)

Query: 260 ILAPRFSSNGKRALISVQKDEAM---------------------DIYSVD-LQSNATERL 297
           +   R S NG+RA+      +                        ++  D   +   ++L
Sbjct: 16  VSDARLSPNGRRAVAVHTTIQTPPKDREEAAPDANAEAAPRYVSHLFLYDTAAAGRAQQL 75

Query: 298 TNTLFINISASYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T     N    +SP    + F S R         QL+++   G + +R++ D  A   + 
Sbjct: 76  TQAGDANTHPRFSPKGDAVAFLSKRGSPGEAEGAQLHLLPLAGGEARRLT-DLPAGVTEF 134

Query: 353 VWSPQGDLIAFTKFS--------------------------GEKFAIGVMKKDGSQERLL 386
            W P G+L+A                                    I +    G   +L 
Sbjct: 135 CWHPGGELLALVSQGERDTAKGRPRVIDRMFYKGDGVGFRPSGSAQIYLCDLSGEVTKLT 194

Query: 387 VEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSIDLN---------GR------N 427
              S+     ++P G +L+F+     +      S L+++ L          GR      N
Sbjct: 195 KLQSSPSGLVFTPDGAALLFTAAEDERAADAWQSLLWTLPLEDAKGGGYKGGRPTPVVSN 254

Query: 428 ETLINTPAYASDPQWVGFM 446
            T +  P+ + D ++V  +
Sbjct: 255 LTRVAAPSPSPDGRFVALL 273


>gi|73668267|ref|YP_304282.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
 gi|72395429|gb|AAZ69702.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
          Length = 713

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 96/290 (33%), Gaps = 22/290 (7%)

Query: 165 SITGEKGDFNSRI----LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           SI   +G F   I    +              +   D      + +T     +   P   
Sbjct: 131 SIIDAEGTFAPAIYGDKIVCMGYRGEPYEGYDIYTYDISTKKEKRITDD-SAVFSAPAIY 189

Query: 221 PNQQKVAYA---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
               ++ +     Y    +  +Y+ +    +   RI N  S      +     R +    
Sbjct: 190 --GDRIVWEDNRRYGSTGMDDIYMYNLSTSKET-RITNSGSANYPAIYD---NRIVWVDS 243

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           ++   D+Y  D+ +    ++TN     + +       +I +  +R G   +Y+   +   
Sbjct: 244 RNGYTDVYMYDISTKKETQITNNESKKMYSVI--CGDRIAWMDNRNGSWDIYMYDLSTKK 301

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +  I+ + E + +  ++   GD I ++      + + V      QE    + S+   P  
Sbjct: 302 ETPIT-NHETTCYPEIY---GDRIVWSDGRNGNWDVYVYDLATGQEWHTTDKSDQYDPEI 357

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
              G  ++++  ++G+    + ++  +         P     P  V F D
Sbjct: 358 --YGDRIVWTDLRNGNRDIYMGTLSKSSPVAAFSAAPTTGKAPLKVKFTD 405


>gi|284989733|ref|YP_003408287.1| WD40 repeat, subgroup [Geodermatophilus obscurus DSM 43160]
 gi|284062978|gb|ADB73916.1| WD40 repeat, subgroup [Geodermatophilus obscurus DSM 43160]
          Length = 1217

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 70/237 (29%), Gaps = 20/237 (8%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGN 255
              G             +    FSP+   +A A  D      V L +    R     +  
Sbjct: 771 PATGQPRGVPLEGHVGAVNGVAFSPDGTLLATAGADA----TVRLWNPATGRPRGGPLAG 826

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
               + A  FS +G     S   D+   I+ V    + + RL     +    ++SPD   
Sbjct: 827 HDGAVTAVAFSPDGASLG-SAGTDQTARIWEVADTYSVSRRLAGDPGLVYEVAFSPDG-- 883

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
               S      ++ +      + +         +     +SP G L+A            
Sbjct: 884 -ALLSTAGRNGRVRLWDPVTGEPRGAPLFGHSGAVNGVAFSPDGTLLASASVDEMAL--- 939

Query: 375 VMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +      + +   L      + A  +SP G  L  + +   D   +L+     G  +
Sbjct: 940 LWDPATGRPQGALLTTHGGPVNAVAFSPDGTPLATASE---DGTVQLWDA-ATGEPQ 992



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 81/250 (32%), Gaps = 24/250 (9%)

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
             F+     +S +  +G ++  L      G             +    FSP+   +A A+ 
Sbjct: 878  AFSPDGALLSTAGRNGRVR--LWD-PVTGEPRGAPLFGHSGAVNGVAFSPDGTLLASASV 934

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D+   + +             +      + A  FS +G     +  +D  + ++  D  +
Sbjct: 935  DE---MALLWDPATGRPQGALLTTHGGPVNAVAFSPDGTPLA-TASEDGTVQLW--DAAT 988

Query: 292  NATE--RLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKE-A 347
               +   LT         ++SPD + +    SDR     + +         R        
Sbjct: 989  GEPQGAPLTGHTDAVNGVAFSPDGTLLASAGSDRT----VRLWNPATGRPHREPLGGHVG 1044

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSL 404
            +     +SP G L+A     G    + +         +E L      + A  +SP G  L
Sbjct: 1045 AVNGVAFSPDGTLLATAGADGT---VRLWNPATGRPHREPLTGHTDAVNAVAFSPDGTLL 1101

Query: 405  IFSRKKDGDT 414
            + S   DG T
Sbjct: 1102 V-SAGADGTT 1110



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 77/242 (31%), Gaps = 20/242 (8%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             D  ++         +++E  FSP+    A  +    +           +     +    
Sbjct: 858  ADTYSVSRRLAGDPGLVYEVAFSPDG---ALLSTAGRNGRVRLWDPVTGEPRGAPLFGHS 914

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQ 315
              +    FS +G     S   DE   ++  D  +   +   LT       + ++SPD + 
Sbjct: 915  GAVNGVAFSPDGTLLA-SASVDEMALLW--DPATGRPQGALLTTHGGPVNAVAFSPDGTP 971

Query: 316  IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            +   +  +G  QL+   +       ++   +A      +SP G L+A    +G    + +
Sbjct: 972  LA-TASEDGTVQLWDAATGEPQGAPLTGHTDA-VNGVAFSPDGTLLA---SAGSDRTVRL 1026

Query: 376  MKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                  +        +   +    +SP G  L        D   +L++    GR      
Sbjct: 1027 WNPATGRPHREPLGGHVGAVNGVAFSPDGTLLA---TAGADGTVRLWN-PATGRPHREPL 1082

Query: 433  TP 434
            T 
Sbjct: 1083 TG 1084



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 71/228 (31%), Gaps = 20/228 (8%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                D  +    FSP+   +   +   +   R++ +        +R+     ++    FS
Sbjct: 824  LAGHDGAVTAVAFSPDGASL--GSAGTDQTARIWEVA-DTYSVSRRLAGDPGLVYEVAFS 880

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREG 324
             +G   L +  ++  + ++  D  +       L          ++SPD + +   S  E 
Sbjct: 881  PDGA-LLSTAGRNGRVRLW--DPVTGEPRGAPLFGHSGAVNGVAFSPDGTLLASASVDE- 936

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
               L    + G  Q  +            +SP G  +A     G    + +      + +
Sbjct: 937  -MALLWDPATGRPQGALLTTHGGPVNAVAFSPDGTPLATASEDGT---VQLWDAATGEPQ 992

Query: 385  ---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
               L      +    +SP G  L        D   +L++    GR   
Sbjct: 993  GAPLTGHTDAVNGVAFSPDGTLLA---SAGSDRTVRLWN-PATGRPHR 1036



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 57/383 (14%), Positives = 108/383 (28%), Gaps = 59/383 (15%)

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV------EFRLWDVKDR 136
            +      IT    +     W S G    V G V       +          RLWD    
Sbjct: 537 DRSPPAGLITALSQLTHRTAWVSDGHDGAVFG-VAFSPDGAVLAGAGADGTVRLWDAATG 595

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +                  HT +             F+     ++ +   G ++  L   
Sbjct: 596 R----------ARGAPLTGHTDAVTAV--------AFSPDGAVLASAGADGTVR--LWD- 634

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
              G             +    F+P+   +  A  D      + L DT   R    +   
Sbjct: 635 PATGRPRGAPLAGHTDAVNAVAFNPDGTLLVSAGTDR----TIRLWDTATGRGRGELAGV 690

Query: 257 RSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATE------RLTNTLFIN-IS 306
                A     FS +G     S   D  + ++  D  +          +  +   +N ++
Sbjct: 691 AGHAGAVNAVAFSPDGSLLA-SAGADGTVRLW--DPATGGPHGAPLAGQAGHVGAVNAVA 747

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAFTK 365
            S +PD S +           + +        + +  +    +     +SP G L+A   
Sbjct: 748 FSPAPDGSLLA---TAGADRTVRLWNPATGQPRGVPLEGHVGAVNGVAFSPDGTLLA--- 801

Query: 366 FSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI- 421
            +G    + +      + R   L   D  + A  +SP G SL        D  ++++ + 
Sbjct: 802 TAGADATVRLWNPATGRPRGGPLAGHDGAVTAVAFSPDGASL---GSAGTDQTARIWEVA 858

Query: 422 DLNGRNETLINTPAYASDPQWVG 444
           D    +  L   P    +  +  
Sbjct: 859 DTYSVSRRLAGDPGLVYEVAFSP 881



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 64/206 (31%), Gaps = 15/206 (7%)

Query: 165  SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSP 221
            ++    G   + + F  +            V   D   G             +    FSP
Sbjct: 951  ALLTTHGGPVNAVAFSPDGTPLATASEDGTVQLWDAATGEPQGAPLTGHTDAVNGVAFSP 1010

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            +   +A           V L +    R   + +G     +    FS +G     +   D 
Sbjct: 1011 DGTLLA----SAGSDRTVRLWNPATGRPHREPLGGHVGAVNGVAFSPDGTLLA-TAGADG 1065

Query: 281  AMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             + ++  +  +    R  LT       + ++SPD + +V  +  +G   L+   + G   
Sbjct: 1066 TVRLW--NPATGRPHREPLTGHTDAVNAVAFSPDGTLLV-SAGADGTTLLWD-PATGQPY 1121

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFT 364
                +      +   +S  G L+A T
Sbjct: 1122 GEPLEGNSGVVWSAAFSLDGRLLATT 1147


>gi|325285905|ref|YP_004261695.1| secreted dipeptidyl-peptidase IV family protein [Cellulophaga
           lytica DSM 7489]
 gi|324321359|gb|ADY28824.1| secreted dipeptidyl-peptidase IV family protein [Cellulophaga
           lytica DSM 7489]
          Length = 790

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 85/252 (33%), Gaps = 22/252 (8%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D  N  Y   +R   +  P +S + +K     ++ D +D   V L             + 
Sbjct: 313 DYPNKTYKNDNRIGYIVGPIWSADGKKAVLDISSNDYKDRWIVLLNLADGTVTNLDHQHD 372

Query: 257 RSMILAPR-------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           ++ I  P        +  +        +K     +Y+ ++ +  T+ LT+  F     + 
Sbjct: 373 KAWIAGPGIGWGNLGWLPDDNSIWFQSEKTGYSHLYTTNVLTKKTKALTSGNFEIYEPTI 432

Query: 310 SPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKF 366
           S D  +  F +++   G  Q Y M   G    +++     +  +   SP    +A    +
Sbjct: 433 STDKKRWYFTANKNHPGDRQFYTMPLKGGKLTQLTTMVGNN--EVTLSPDERQMAILHSY 490

Query: 367 SGEKFAIGVM-----KKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLY 419
           S +   + +       +  +  + +           TW      + F  +   +  ++LY
Sbjct: 491 SNKPTELYIQPNPIKNRSKTAPKQITNSLTDSFKKYTW-KDPEVITFKAEDGAEVYARLY 549

Query: 420 SIDLNGRNETLI 431
                 +N+  +
Sbjct: 550 QPKTATKNKAAV 561



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 11/146 (7%)

Query: 299 NTLFINISASYSPDSSQIVF-ESDREGKEQ-LYVMQSNGSDQKRISQ--------DKEAS 348
           N +   +   +S D  + V   S  + K++ + ++         +               
Sbjct: 323 NRIGYIVGPIWSADGKKAVLDISSNDYKDRWIVLLNLADGTVTNLDHQHDKAWIAGPGIG 382

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFS 407
           + +  W P  + I F         +        + + L      +  PT S   +   F+
Sbjct: 383 WGNLGWLPDDNSIWFQSEKTGYSHLYTTNVLTKKTKALTSGNFEIYEPTISTDKKRWYFT 442

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINT 433
             K+     + Y++ L G   T + T
Sbjct: 443 ANKNHPGDRQFYTMPLKGGKLTQLTT 468


>gi|170096538|ref|XP_001879489.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164645857|gb|EDR10104.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 918

 Score = 79.3 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 52/307 (16%), Positives = 107/307 (34%), Gaps = 44/307 (14%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           R+WD +  +Q+ G            +A   S D                     S+VSG 
Sbjct: 629 RIWDAETGRQVGG-PLQGKENQLCSVA--FSPD-------------------GMSIVSGS 666

Query: 189 IKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               + + D   G  +        + ++   FSP+ +++   + D    +R++ + T   
Sbjct: 667 DDGMVQIWDAKTGGQVGEPLRGHIKWVWSVAFSPDGKRIVSGSGD--RTVRIWDVTTG-G 723

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINI 305
                +      + +  FS +G   + S   D+ + I+  D ++     E L        
Sbjct: 724 PVGDPLRGHIDWVWSVAFSPDGTHIV-SGSYDKTIRIW--DARTGIQVKEPLCGHTDWVC 780

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLIAF 363
           S ++SPD  +IV  S     E + +  +       ++  +      +   +SP G  I  
Sbjct: 781 SVAFSPDGGRIVSGSR---DETIRIWDAKDGKPVGEKPLEGHRNFIWSVAFSPDGRRIV- 836

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-----WSPSGRSLIFSRKKDGDTGSKL 418
           +  S     I V +   +   + V     Q+P+     +S  G  +I       D   ++
Sbjct: 837 SGSSDGAIRIWVAETSETWSPVAVTSLREQSPSTSSVAFSSDGALMI--SGSTFDRTIRI 894

Query: 419 YSIDLNG 425
           + ++  G
Sbjct: 895 WDVEALG 901



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 59/193 (30%), Gaps = 16/193 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISV 276
             SP+   +     D      V + D    R        +   L +  FS +G   + S 
Sbjct: 611 AISPDGTSIVSGLRDG----TVRIWDAETGRQVGGPLQGKENQLCSVAFSPDGMSIV-SG 665

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  + I+         E L   +    S ++SPD  +IV  S   G   + +      
Sbjct: 666 SDDGMVQIWDAKTGGQVGEPLRGHIKWVWSVAFSPDGKRIVSGS---GDRTVRIWDVTTG 722

Query: 337 DQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNL 392
                       + +   +SP G  I    +      I +         +E L      +
Sbjct: 723 GPVGDPLRGHIDWVWSVAFSPDGTHIVSGSYDKT---IRIWDARTGIQVKEPLCGHTDWV 779

Query: 393 QAPTWSPSGRSLI 405
            +  +SP G  ++
Sbjct: 780 CSVAFSPDGGRIV 792



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 74/210 (35%), Gaps = 35/210 (16%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ I  G     V  R+WDV     +            R   H   D ++       G  
Sbjct: 702 GKRIVSGSGDRTV--RIWDVTTGGPVG--------DPLR--GHI--DWVWSVAFSPDGTH 747

Query: 174 NSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                     +VSG    ++ + D R G  ++         +    FSP+  ++   + D
Sbjct: 748 ----------IVSGSYDKTIRIWDARTGIQVKEPLCGHTDWVCSVAFSPDGGRIVSGSRD 797

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           +   +R++          K +   R+ I +  FS +G+R + S   D A+ I+  +    
Sbjct: 798 E--TIRIWDAKDGKPVGEKPLEGHRNFIWSVAFSPDGRRIV-SGSSDGAIRIWVAETSE- 853

Query: 293 ATERLTNTLFINISAS-YSPDSSQIVFESD 321
                T +     S    SP +S + F SD
Sbjct: 854 -----TWSPVAVTSLREQSPSTSSVAFSSD 878


>gi|322370480|ref|ZP_08045038.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
 gi|320549897|gb|EFW91553.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haladaptatus paucihalophilus DX253]
          Length = 595

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 69/186 (37%), Gaps = 10/186 (5%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
              +P  + +G   +          ++S+D       RLT         S SP  S++VF
Sbjct: 16  SAGSPTMTIDG-SLVFLADTTGTPQVWSLDEPGAFPSRLTAHDERVSFVSASPTRSEVVF 74

Query: 319 ESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIG 374
             D   +  +QLY    +   +  ++   EA +    WSP GD IAFT  +  G  F + 
Sbjct: 75  GMDTGSDEHDQLYRYDLDSGTETALTATPEAIHLWGAWSPDGDRIAFTANRREGSTFDVY 134

Query: 375 VMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           V  +D ++  L+ E     L    W   G   I   K +      L+ +D    +   + 
Sbjct: 135 VQGRDDAEATLVHEGPGGFLSVEAW---GEPGIVCSKANASFDQNLFLLDPESGDYRKLT 191

Query: 433 TPAYAS 438
               A 
Sbjct: 192 DDTDAR 197



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 45/346 (13%), Positives = 101/346 (29%), Gaps = 28/346 (8%)

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
             LG      G         L     L D     Q+       +  S R  AH   D+  
Sbjct: 10  RYLGIDS--AGSPTMTIDGSLV---FLADTTGTPQVWSLDEPGAFPS-RLTAH---DERV 60

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
             ++       +R   V          + L   D D      LT + + I     +SP+ 
Sbjct: 61  SFVSASP----TRSEVVFGMDTGSDEHDQLYRYDLDSGTETALTATPEAIHLWGAWSPDG 116

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAM 282
            ++A+     E       +  R D     +       L+   +   G+  ++  + + + 
Sbjct: 117 DRIAFTANRREGSTFDVYVQGRDDAEATLVHEGPGGFLSVEAW---GEPGIVCSKANASF 173

Query: 283 D--IYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           D  ++ +D +S    +LT +T       ++ PD       +       +  +  +     
Sbjct: 174 DQNLFLLDPESGDYRKLTDDTDARYHDVTFGPDDDLYCVTNHGADTAYVARLDLDDGAPT 233

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            + +  + +    +       + + +       +   +     +   +   +L      P
Sbjct: 234 VVEEAGDWNVSHLLLHGGTGRVVWVRNVDGYSEVHAGRLTAGDDIEPLSTPDL------P 287

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
            G  ++F+     D    +     +      +  P   S  +W  F
Sbjct: 288 DG--VVFAAGFGPDGDCAISMSRSDDPKNVFVLNPDTGSAERWTNF 331


>gi|225559733|gb|EEH08015.1| WD domain-containing protein [Ajellomyces capsulatus G186AR]
          Length = 1445

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 81/223 (36%), Gaps = 16/223 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG   N++ + D     ++++      ++    FSP+ Q +A  ++D+     + L +  
Sbjct: 993  SGSSDNTIQLWDPATGVLKHILEGHSNLVSSVAFSPDGQLLASGSFDN----TIQLWNPA 1048

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                   +      +L+  FSSN ++ L S   D  + ++  D  + A +  L       
Sbjct: 1049 TGALKHILEGHSDSVLSVAFSSN-EQLLASGSSDNTIQLW--DPATGALKHTLEGHTGSV 1105

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++S D   +   S       + +        K I      + +   +S    L+A  
Sbjct: 1106 RSVAFSSDGQLLASGSS---DNTIQLWDPATGVLKHILGGHSETVWSVAFSSDEQLLASG 1162

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
                    I +        + ++E  +    +  +SP G+ L+
Sbjct: 1163 SSDNT---IQLWDPATGVLKHILEGHSDLVSSVAFSPDGQLLV 1202



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 81/242 (33%), Gaps = 23/242 (9%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                     ++   FSPN + +A  + D+     ++L D         +      +L+  
Sbjct: 928  QTLEGHSNSVWSVAFSPNGRLLASGSSDN----TIWLWDPATGALEHTLEGHSGPVLSVA 983

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
            FSS+G+    S   D  + ++  D  +   + +       +S+ ++SPD   +   S   
Sbjct: 984  FSSDGQLLA-SGSSDNTIQLW--DPATGVLKHILEGHSNLVSSVAFSPDGQLLASGSF-- 1038

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                + +        K I +    S     +S    L+A          I +        
Sbjct: 1039 -DNTIQLWNPATGALKHILEGHSDSVLSVAFSSNEQLLASGSSDNT---IQLWDPATGAL 1094

Query: 384  RLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            +  +E    ++++  +S  G+ L        D   +L+     G  + ++      S+  
Sbjct: 1095 KHTLEGHTGSVRSVAFSSDGQLLA---SGSSDNTIQLWD-PATGVLKHIL---GGHSETV 1147

Query: 442  WV 443
            W 
Sbjct: 1148 WS 1149



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/238 (13%), Positives = 77/238 (32%), Gaps = 19/238 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG   N++ + D     + +        +    FS + Q +A  + D+     + L D  
Sbjct: 951  SGSSDNTIWLWDPATGALEHTLEGHSGPVLSVAFSSDGQLLASGSSDN----TIQLWDPA 1006

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                   +    +++ +  FS +G+    S   D  + ++  +  + A + +      ++
Sbjct: 1007 TGVLKHILEGHSNLVSSVAFSPDGQLLA-SGSFDNTIQLW--NPATGALKHILEGHSDSV 1063

Query: 306  -SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++S +   +   S       + +        K   +    S     +S  G L+A  
Sbjct: 1064 LSVAFSSNEQLLASGSS---DNTIQLWDPATGALKHTLEGHTGSVRSVAFSSDGQLLASG 1120

Query: 365  KFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                    I +        + ++      + +  +S   + L        D   +L+ 
Sbjct: 1121 SSDNT---IQLWDPATGVLKHILGGHSETVWSVAFSSDEQLLA---SGSSDNTIQLWD 1172



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/343 (14%), Positives = 108/343 (31%), Gaps = 48/343 (13%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI---------SDDIYQ------ 164
                     +LWD       +         S R +A +          SD+  Q      
Sbjct: 1076 ASGSSDNTIQLWDPATGA--LKHTLEGHTGSVRSVAFSSDGQLLASGSSDNTIQLWDPAT 1133

Query: 165  -SITGEKGDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
              +    G  +  +  V+ S       SG   N++ + D     ++++      ++    
Sbjct: 1134 GVLKHILGGHSETVWSVAFSSDEQLLASGSSDNTIQLWDPATGVLKHILEGHSDLVSSVA 1193

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+ Q +   ++D      V   D   D     + +    +    FSS+G+    S   
Sbjct: 1194 FSPDGQLLVSGSFDK----TVRFWDPATDTLKHTLEDHLDKLYLVVFSSDGQLLA-SCSS 1248

Query: 279  DEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++  +  + A +  +     +  S ++SPD   +   S     +   +       
Sbjct: 1249 DNTIRLW--NSVTGALKHTIRGHSDVVQSVAFSPDGQLLASGSF---DKTARLWNLAMGT 1303

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPT 396
             K   +      +   +SP   L+A    SG    + +        +  L  +  +    
Sbjct: 1304 LKHTLEGHSDGVYSVAFSPNSQLLA----SGSDKTVRLWNPATGALQETLSTEGIVSRLE 1359

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            +S      ++     G    +      +GR   + N+P+   +
Sbjct: 1360 FSQDS---LYLNTNLGPFKIQ------SGRGNPIYNSPSTNPE 1393



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 61/182 (33%), Gaps = 15/182 (8%)

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            ++ +     + +    + + +  FS NG+    S   D  + ++  D  + A E  L   
Sbjct: 919  VNEKWSAELQTLEGHSNSVWSVAFSPNGRLLA-SGSSDNTIWLW--DPATGALEHTLEGH 975

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                +S ++S D   +   S       + +        K I +          +SP G L
Sbjct: 976  SGPVLSVAFSSDGQLLASGSS---DNTIQLWDPATGVLKHILEGHSNLVSSVAFSPDGQL 1032

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKL 418
            +A   F      I +        + ++E  +    +  +S + + L        D   +L
Sbjct: 1033 LASGSFDNT---IQLWNPATGALKHILEGHSDSVLSVAFSSNEQLLA---SGSSDNTIQL 1086

Query: 419  YS 420
            + 
Sbjct: 1087 WD 1088


>gi|172039634|ref|YP_001806135.1| WD40-like beta-propeller protein [Cyanothece sp. ATCC 51142]
 gi|171701088|gb|ACB54069.1| WD40-like beta-propeller protein [Cyanothece sp. ATCC 51142]
          Length = 189

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 8/143 (5%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           NT        +S +   +VF SDR+GK  +++          +            P  S 
Sbjct: 45  NTRSSEQYPRFSYEGRYLVFASDRQGKRSIWLYDQVNGRLLPLPGLNQPGTIQDQPDISA 104

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  I +      K  I V  +  S+   + ++    ++ PT S +GR + F   + G  
Sbjct: 105 DGRYIVYVSEQEGKQDIFVYDRQTSRADNITKNIIGEVRHPTISGNGRLIAFESNRLGQW 164

Query: 415 GSKLYSIDLNGRNETLINTPAYA 437
              +Y   LN    T ++ P+ +
Sbjct: 165 DIIIYDRGLN----TPLSLPSQS 183



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 57/143 (39%), Gaps = 3/143 (2%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLF-INISASYSP 311
           N RS    PRFS  G+  + +  +     I+  D  +     L   N    I      S 
Sbjct: 45  NTRSSEQYPRFSYEGRYLVFASDRQGKRSIWLYDQVNGRLLPLPGLNQPGTIQDQPDISA 104

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   IV+ S++EGK+ ++V     S    I+++       P  S  G LIAF      ++
Sbjct: 105 DGRYIVYVSEQEGKQDIFVYDRQTSRADNITKNIIGEVRHPTISGNGRLIAFESNRLGQW 164

Query: 372 AIGVMKKDGSQERLLVEDSNLQA 394
            I +  +  +    L   S++ +
Sbjct: 165 DIIIYDRGLNTPLSLPSQSDIGS 187



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 2/119 (1%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALI 274
            PRFS   + + +A+                   P    N    I   P  S++G+  + 
Sbjct: 52  YPRFSYEGRYLVFASDRQGKRSIWLYDQVNGRLLPLPGLNQPGTIQDQPDISADGRYIVY 111

Query: 275 SVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +++   DI+  D Q++  + +T N +      + S +   I FES+R G+  + +  
Sbjct: 112 VSEQEGKQDIFVYDRQTSRADNITKNIIGEVRHPTISGNGRLIAFESNRLGQWDIIIYD 170



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 5/98 (5%)

Query: 195 VMDRDGANIRYL----TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           +   D  N R L          I  +P  S + + + Y +  +     +++ D +  RA 
Sbjct: 74  IWLYDQVNGRLLPLPGLNQPGTIQDQPDISADGRYIVYVSEQEGK-QDIFVYDRQTSRAD 132

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
               N    +  P  S NG+       +    DI   D
Sbjct: 133 NITKNIIGEVRHPTISGNGRLIAFESNRLGQWDIIIYD 170



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 8/85 (9%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------AP 395
           S +  +S   P +S +G  + F      K +I +  +     RLL      Q       P
Sbjct: 43  SLNTRSSEQYPRFSYEGRYLVFASDRQGKRSIWLYDQ--VNGRLLPLPGLNQPGTIQDQP 100

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYS 420
             S  GR +++  +++G     +Y 
Sbjct: 101 DISADGRYIVYVSEQEGKQDIFVYD 125


>gi|172035655|ref|YP_001802156.1| WD40-like beta-propeller protein [Cyanothece sp. ATCC 51142]
 gi|171697109|gb|ACB50090.1| WD40-like beta-propeller protein [Cyanothece sp. ATCC 51142]
          Length = 170

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 57/137 (41%), Gaps = 5/137 (3%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISAS 308
           R  N R+  L P+ +S     +    ++ + D+Y  D Q      L     ++      S
Sbjct: 35  RGLNSRASDLEPQVTS--TYIVFISDRNGSQDVYLFDAQQRQLISLPGLNALDEIASHPS 92

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S D   +VF   R+GK  +YV       ++ ++ D +A   +P+ +  G  IAF     
Sbjct: 93  ISEDGRYVVFGGSRQGKSNIYVYDRQTEQKRNLTADLQAEVRNPIINADGTQIAFEIAQD 152

Query: 369 EKFAIGVMKKDGSQERL 385
            ++ I +    G+  +L
Sbjct: 153 GQWDIMIYDLSGNPLKL 169



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 12/138 (8%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY----FDPVW 354
           N+   ++    +  S+ IVF SDR G + +Y+  +    ++ IS     +       P  
Sbjct: 38  NSRASDLEPQVT--STYIVFISDRNGSQDVYLFDAQ--QRQLISLPGLNALDEIASHPSI 93

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDG 412
           S  G  + F      K  I V  +   Q+R L  D   +   P  +  G  + F   +DG
Sbjct: 94  SEDGRYVVFGGSRQGKSNIYVYDRQTEQKRNLTADLQAEVRNPIINADGTQIAFEIAQDG 153

Query: 413 DTGSKLYSIDLNGRNETL 430
                +Y  DL+G    L
Sbjct: 154 QWDIMIY--DLSGNPLKL 169



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 50/124 (40%), Gaps = 7/124 (5%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATY 231
           ++ I+F+S+   S      + + D     +  L    + D+I   P  S + + V +   
Sbjct: 50  STYIVFISDRNGS----QDVYLFDAQQRQLISLPGLNALDEIASHPSISEDGRYVVFGGS 105

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                  +Y+ D + ++      + ++ +  P  +++G +    + +D   DI   DL  
Sbjct: 106 RQGKS-NIYVYDRQTEQKRNLTADLQAEVRNPIINADGTQIAFEIAQDGQWDIMIYDLSG 164

Query: 292 NATE 295
           N  +
Sbjct: 165 NPLK 168



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 38/126 (30%), Gaps = 17/126 (13%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G  +      +G  +     +  AS  +P  +     I F         + +      Q
Sbjct: 20  TGYPRYLNFPFDGGGRGL---NSRASDLEPQVT--STYIVFISDRNGSQDVYLFDAQ--Q 72

Query: 383 ERLLVEDSNL------QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-- 434
            +L+              P+ S  GR ++F   + G   S +Y  D     +  +     
Sbjct: 73  RQLISLPGLNALDEIASHPSISEDGRYVVFGGSRQGK--SNIYVYDRQTEQKRNLTADLQ 130

Query: 435 AYASDP 440
           A   +P
Sbjct: 131 AEVRNP 136


>gi|163848054|ref|YP_001636098.1| WD-40 repeat-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222525943|ref|YP_002570414.1| WD-40 repeat-containing protein [Chloroflexus sp. Y-400-fl]
 gi|163669343|gb|ABY35709.1| WD-40 repeat protein [Chloroflexus aurantiacus J-10-fl]
 gi|222449822|gb|ACM54088.1| WD-40 repeat protein [Chloroflexus sp. Y-400-fl]
          Length = 438

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/223 (19%), Positives = 83/223 (37%), Gaps = 14/223 (6%)

Query: 199 DGANIRYLTP-SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           DG  + +L    R    F   F PN + +A A +D      VYL D +  +    +    
Sbjct: 227 DGELLFHLGDEQRHGAFFSVAFQPNGRFIATAGWD----PVVYLWDAQNGQPVAELPGHE 282

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            +I +  FS +    L S   D  + ++ VD ++       ++  I  S + SPD   + 
Sbjct: 283 GLINSVTFSPD-SSLLFSAGYDRVIRVWDVDSRTLVQTLRGHSDAI-FSMTVSPDGRLLA 340

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     ++V +       +I      + FD  +SP G  +A   + G    +  + 
Sbjct: 341 ---SAGSDGAIFVWRVADGQPLQILATPSGACFDVAFSPDGRYLASAHY-GRIVRVWHVS 396

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G +  L   + ++    ++P G  L        D   +++S
Sbjct: 397 DGGLRWELSGHNESVTCVAFTPDGDMLASGSY---DATVRIWS 436



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 76/222 (34%), Gaps = 16/222 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP++Q +A  ++D      + L      +  + I      I A  FS + +    + +
Sbjct: 161 TFSPDRQMLAIGSWDG----AIRLWRLPDYQMIRVISGNIGEINAIDFSPDSQLIAAAGR 216

Query: 278 KDEAMDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +   + ++ ++        L +        S ++ P+     F +       +Y+  +  
Sbjct: 217 QHG-VRVWRIE-DGELLFHLGDEQRHGAFFSVAFQPNGR---FIATAGWDPVVYLWDAQN 271

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                     E       +SP   L+ F+        +  +      + L      + + 
Sbjct: 272 GQPVAELPGHEGLINSVTFSPDSSLL-FSAGYDRVIRVWDVDSRTLVQTLRGHSDAIFSM 330

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           T SP GR L        D    ++ +  +G+   ++ TP+ A
Sbjct: 331 TVSPDGRLLA---SAGSDGAIFVWRV-ADGQPLQILATPSGA 368



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 65/202 (32%), Gaps = 12/202 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQK 225
              G F S + F               V   D  N + +   P  + ++    FSP+   
Sbjct: 238 QRHGAFFS-VAFQPNGRFIATAGWDPVVYLWDAQNGQPVAELPGHEGLINSVTFSPDSSL 296

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +  A YD      + + D       + +      I +   S +G+    S   D A+ ++
Sbjct: 297 LFSAGYDR----VIRVWDVDSRTLVQTLRGHSDAIFSMTVSPDGRLLA-SAGSDGAIFVW 351

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            V       + L          ++SPD   +   S   G+  + V   +    +      
Sbjct: 352 RV-ADGQPLQILATPSGACFDVAFSPDGRYLA--SAHYGR-IVRVWHVSDGGLRWELSGH 407

Query: 346 EASYFDPVWSPQGDLIAFTKFS 367
             S     ++P GD++A   + 
Sbjct: 408 NESVTCVAFTPDGDMLASGSYD 429


>gi|170115910|ref|XP_001889148.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635938|gb|EDR00239.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1139

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 94/307 (30%), Gaps = 48/307 (15%)

Query: 126  VEFRLWDVKDRKQIIGKKFFSSPASWRKIA------HTIS----------DDIYQSITGE 169
            V  R+WD    + I     F    S R++A      H +           + +    T  
Sbjct: 801  VTIRVWDALSGQNIT--VIFRGSDSIRRVAFSSDGKHILCATGNRIIRLWNALTSHCTLS 858

Query: 170  KGDFNSRILFVSESVVSGI------IKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPN 222
              + +   +F      +G         N + V D   G          +  +    FSP+
Sbjct: 859  PLEDDEGSVFTVAFSPNGKHILSRCGDNIIKVWDALTGHTKVDHVRGHEDGIRSVAFSPD 918

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             + +   + D    LR++   T +      +    +M+ +  FS +G+    S   D  +
Sbjct: 919  GKHIVSGSNDA--TLRIWDALTGLSVMG-PLRGHDAMVTSVAFSPDGRYIA-SGSHDCTV 974

Query: 283  DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRI 341
             ++           LT    +  S ++SPD     F         + V  +  G      
Sbjct: 975  RVWDA---------LTGHGDLINSVAFSPDGR---FIISGSNDRTIRVWDALTGQSIMNP 1022

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWS 398
                +       +SP G  I           + V      Q     L    + + +  +S
Sbjct: 1023 LIGHKGRVNSVAFSPDGRYIVSGSDDKT---VRVWDSSTGQSVMDPLKGHYAWVYSVAFS 1079

Query: 399  PSGRSLI 405
            P G+ ++
Sbjct: 1080 PDGKYIV 1086



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 76/229 (33%), Gaps = 32/229 (13%)

Query: 185  VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VSG    +L + D   G ++       D ++    FSP+ + +A  ++D           
Sbjct: 923  VSGSNDATLRIWDALTGLSVMGPLRGHDAMVTSVAFSPDGRYIASGSHDC---------- 972

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTL 301
                R    +     +I +  FS +G+   IS   D  + ++  D  +       L    
Sbjct: 973  --TVRVWDALTGHGDLINSVAFSPDGRFI-ISGSNDRTIRVW--DALTGQSIMNPLIGHK 1027

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDL 360
                S ++SPD   IV  SD    + + V  S+         +   A  +   +SP G  
Sbjct: 1028 GRVNSVAFSPDGRYIVSGSD---DKTVRVWDSSTGQSVMDPLKGHYAWVYSVAFSPDGKY 1084

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-----APTWSPSGRSL 404
            I           I +          L +          +  +SP  +++
Sbjct: 1085 IVSGSLDKT---IRLWDAVTGHS--LGDPFQGHYAAVLSVVFSPDDKTI 1128



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 90/270 (33%), Gaps = 27/270 (10%)

Query: 185 VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILR---V 239
           VSG    ++ V D   G NI       D  +    +     Q V       +D +    +
Sbjct: 746 VSGSDGGAIHVWDALTGHNIMDFKGHADYTIKI--WDALTGQCVMGPLEGHDDWISSVTI 803

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERL 297
            + D    +    I      I    FSS+GK  L +        I   +  ++      L
Sbjct: 804 RVWDALSGQNITVIFRGSDSIRRVAFSSDGKHILCAT---GNRIIRLWNALTSHCTLSPL 860

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSP 356
            +      + ++SP+   I+    R G   + V  +     K    +  E       +SP
Sbjct: 861 EDDEGSVFTVAFSPNGKHIL---SRCGDNIIKVWDALTGHTKVDHVRGHEDGIRSVAFSP 917

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            G  I           + +            L   D+ + +  +SP GR +        D
Sbjct: 918 DGKHIVSGSNDAT---LRIWDALTGLSVMGPLRGHDAMVTSVAFSPDGRYIASGSH---D 971

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              +++   L G  + LIN+ A++ D +++
Sbjct: 972 CTVRVWDA-LTGHGD-LINSVAFSPDGRFI 999



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 94/283 (33%), Gaps = 65/283 (22%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQ 277
           F+P   K++   +       + + + ++ + P R        + P  +S +G+  + S  
Sbjct: 692 FAPQNSKIS-LHFIQHFGKTLTIENGQMKQWPDRCLLKIKTDIGPLAYSPDGRHIV-SGS 749

Query: 278 KDEAMDIY-------SVDLQS------NATERLT-------------------------- 298
              A+ ++        +D +          + LT                          
Sbjct: 750 DGGAIHVWDALTGHNIMDFKGHADYTIKIWDALTGQCVMGPLEGHDDWISSVTIRVWDAL 809

Query: 299 NTLFINISASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKR-ISQDKEASYFD 351
           +   I +    S    ++ F SD        G   + +  +  S       +D E S F 
Sbjct: 810 SGQNITVIFRGSDSIRRVAFSSDGKHILCATGNRIIRLWNALTSHCTLSPLEDDEGSVFT 869

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSR 408
             +SP G  I      G+   I V        +   +   +  +++  +SP G+ ++   
Sbjct: 870 VAFSPNGKHIL--SRCGDNI-IKVWDALTGHTKVDHVRGHEDGIRSVAFSPDGKHIV--- 923

Query: 409 KKDGDTGSKLYS----IDLNG---RNETLINTPAYASDPQWVG 444
               D   +++     + + G    ++ ++ + A++ D +++ 
Sbjct: 924 SGSNDATLRIWDALTGLSVMGPLRGHDAMVTSVAFSPDGRYIA 966


>gi|194334792|ref|YP_002016652.1| WD-40 repeat-containing protein [Prosthecochloris aestuarii DSM
           271]
 gi|194312610|gb|ACF47005.1| WD-40 repeat protein [Prosthecochloris aestuarii DSM 271]
          Length = 316

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 19/241 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG   +++ + D       +L    D  +    FSP+ + +A  + D      + L
Sbjct: 89  DRVASGSTDSTVRIWDPAPGKCVHLCKGHDTAVRMVAFSPDGKTLASCSRDT----LIKL 144

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
            D    R  K +    S I    +S++GKR +      E   I   D+ S          
Sbjct: 145 WDVETGRELKTLSGHISYIECVAWSNDGKRLV---SCGEETVIRIWDVASGKNTASYATG 201

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             ++ +A +SPD S I          ++ ++ +   + K   +  +       +SP G  
Sbjct: 202 DSLSHTACFSPDDSLIALC---GRDAKVKILDAASGEIKHTLEGHDDGARSVCFSPDGTK 258

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKL 418
            A          + +      +         L+  +   SP G +++ S     D   KL
Sbjct: 259 AASVANDE---KVILWDVVTGRLIHTYRGHVLEVQSVDISPDGTTIVSSSD---DRKIKL 312

Query: 419 Y 419
           +
Sbjct: 313 W 313



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 63/208 (30%), Gaps = 16/208 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N+          +   RFSP+ +K+   ++D++    V L D         +    + +
Sbjct: 24  ENLIRTLEGHQDRVLGVRFSPDGKKLVSGSFDEK----VMLWDVATGAPLHTMSGHDTWV 79

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE 319
               +S NG R   S   D  + I+  D        L       +   ++SPD   +   
Sbjct: 80  ECVDYSPNGDRVA-SGSTDSTVRIW--DPAPGKCVHLCKGHDTAVRMVAFSPDGKTLASC 136

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S       + +       + +      +      WS  G  +      GE+  I +    
Sbjct: 137 SR---DTLIKLWDVETGRELKTLSGHISYIECVAWSNDGKRLVSC---GEETVIRIWDVA 190

Query: 380 GSQER--LLVEDSNLQAPTWSPSGRSLI 405
             +        DS      +SP    + 
Sbjct: 191 SGKNTASYATGDSLSHTACFSPDDSLIA 218



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 63/195 (32%), Gaps = 31/195 (15%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            +LWDV+  +++       S               Y        D           +VS 
Sbjct: 142 IKLWDVETGRELKTLSGHIS---------------YIECVAWSNDGK--------RLVSC 178

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  + + D           + D +     FSP+   +A    D +    V ++D    
Sbjct: 179 GEETVIRIWDVASGKNTASYATGDSLSHTACFSPDDSLIALCGRDAK----VKILDAASG 234

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-S 306
                +        +  FS +G +A  SV  DE + ++  D+ +           + + S
Sbjct: 235 EIKHTLEGHDDGARSVCFSPDGTKAA-SVANDEKVILW--DVVTGRLIHTYRGHVLEVQS 291

Query: 307 ASYSPDSSQIVFESD 321
              SPD + IV  SD
Sbjct: 292 VDISPDGTTIVSSSD 306


>gi|71275523|ref|ZP_00651809.1| Peptidase S9, prolyl oligopeptidase active site region:Peptidase
           S9B, dipeptidylpeptidase IV N-terminal [Xylella
           fastidiosa Dixon]
 gi|71900170|ref|ZP_00682310.1| Peptidase S9, prolyl oligopeptidase active site region [Xylella
           fastidiosa Ann-1]
 gi|170729264|ref|YP_001774697.1| dipeptidyl-peptidase [Xylella fastidiosa M12]
 gi|71163823|gb|EAO13539.1| Peptidase S9, prolyl oligopeptidase active site region:Peptidase
           S9B, dipeptidylpeptidase IV N-terminal [Xylella
           fastidiosa Dixon]
 gi|71730059|gb|EAO32150.1| Peptidase S9, prolyl oligopeptidase active site region [Xylella
           fastidiosa Ann-1]
 gi|167964057|gb|ACA11067.1| dipeptidyl-peptidase [Xylella fastidiosa M12]
          Length = 795

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 98/306 (32%), Gaps = 40/306 (13%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD- 197
           ++ K          KI H +++  Y+     +          +    +    ++L ++D 
Sbjct: 246 LVTKAKNVDKGQIGKIPHYVTESGYEEFQDVR----------TRVGRNMPAPHTLWLIDL 295

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNF 256
           +DG   +    S   I  +P                  + +    D      P RI  N 
Sbjct: 296 KDGTARQLSFSSLPGINEDP---------------LAALRKANRKDPFKGERPVRIETNA 340

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-----RLTNTLFINISAS--- 308
            S + A  ++ +G+   + ++  +  D +   +           RL +  +IN   +   
Sbjct: 341 ESNVPAIHWTQDGRNVAVDIRSIDNKDRWIAAVDLKQATLNVRHRLHDGAWINWDFNDFG 400

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS- 367
           + PD+  +   S+  G   LY ++  G  ++R           P  S  G  + F     
Sbjct: 401 WLPDNRTLWLLSEESGYSHLYTIEETGIPKQR--TFGHWEVSAPRLSADGRSVYFVCNPT 458

Query: 368 -GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               + +  +  D      L     ++    SP GR ++           +L  I  NG 
Sbjct: 459 WPGGYEVCKLDLDSGHFDTLTALQGVEDFDLSPDGRQIL-VLYSGSYLPPQLAVISTNGG 517

Query: 427 NETLIN 432
              ++ 
Sbjct: 518 QARVLT 523



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 60/159 (37%), Gaps = 10/159 (6%)

Query: 202 NIRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           N+R+       I ++     + P+ + +   + +       +L        PK+      
Sbjct: 381 NVRHRLHDGAWINWDFNDFGWLPDNRTLWLLSEESG---YSHLYTIEETGIPKQRTFGHW 437

Query: 259 MILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            + APR S++G+              ++  +DL S   + LT    +      SPD  QI
Sbjct: 438 EVSAPRLSADGRSVYFVCNPTWPGGYEVCKLDLDSGHFDTLTALQGVEDF-DLSPDGRQI 496

Query: 317 -VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            V  S      QL V+ +NG   + ++  + +++    W
Sbjct: 497 LVLYSGSYLPPQLAVISTNGGQARVLTDTRTSTFKAKQW 535



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 71/201 (35%), Gaps = 12/201 (5%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPK-RIGNF 256
           G     +  + +  +    ++ + + VA    + D++D     +   +     + R+ + 
Sbjct: 330 GERPVRIETNAESNVPAIHWTQDGRNVAVDIRSIDNKDRWIAAVDLKQATLNVRHRLHDG 389

Query: 257 RSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             +        +  + +   +  ++     +Y+++ ++   ++ T   +   +   S D 
Sbjct: 390 AWINWDFNDFGWLPDNRTLWLLSEESGYSHLYTIE-ETGIPKQRTFGHWEVSAPRLSADG 448

Query: 314 SQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-AFTKFSGEK 370
             + F  +    G  ++  +  +      ++  +    FD   SP G  I      S   
Sbjct: 449 RSVYFVCNPTWPGGYEVCKLDLDSGHFDTLTALQGVEDFD--LSPDGRQILVLYSGSYLP 506

Query: 371 FAIGVMKKDGSQERLLVEDSN 391
             + V+  +G Q R+L +   
Sbjct: 507 PQLAVISTNGGQARVLTDTRT 527



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 49/157 (31%), Gaps = 9/157 (5%)

Query: 288 DLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-----RI 341
             +     R+ TN      +  ++ D   +  +      +  ++   +          R+
Sbjct: 327 PFKGERPVRIETNAESNVPAIHWTQDGRNVAVDIRSIDNKDRWIAAVDLKQATLNVRHRL 386

Query: 342 SQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                    + D  W P    +           +  +++ G  ++       + AP  S 
Sbjct: 387 HDGAWINWDFNDFGWLPDNRTLWLLSEESGYSHLYTIEETGIPKQRTFGHWEVSAPRLSA 446

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPA 435
            GRS+ F        G ++  +DL+ G  +TL     
Sbjct: 447 DGRSVYFVCNPTWPGGYEVCKLDLDSGHFDTLTALQG 483


>gi|149923599|ref|ZP_01911998.1| WD-40 repeat [Plesiocystis pacifica SIR-1]
 gi|149815568|gb|EDM75102.1| WD-40 repeat [Plesiocystis pacifica SIR-1]
          Length = 1894

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 79/228 (34%), Gaps = 16/228 (7%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++V+     SL V D + A  R      +  +    FSP+  ++A  +   +   RV+ +
Sbjct: 1068 TLVTASADGSLRVWDANTAVERTRLDGHEGPVLAVDFSPDGTRIA--SAGRDGSARVWDL 1125

Query: 243  DTRIDRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
                     R        ++      F  +G   +I+        ++S    S     + 
Sbjct: 1126 SAESSPVVLRPEGPERTTVSALHDVAFGPDGA-LVITASHTGQATVWS--TASGEALLVL 1182

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +      +A +S D +Q++  +D  G+ QL+   +   +++       A       SP G
Sbjct: 1183 DHDHPVRAARFSEDGTQLI-TADEGGQVQLW--DATTGERRGPLVGHTAPVRGLALSPDG 1239

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLI 405
             L+A          + V      + R  L     +    +SP G  L 
Sbjct: 1240 TLLASASEDET---VRVWDLVTGEARSTLAHGQVVYTVAFSPDGELLA 1284



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 88/249 (35%), Gaps = 17/249 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ V D      R       Q+++   FSP+ + +A  T+DDE     +L +  
Sbjct: 1244 SASEDETVRVWDLVTGEARSTLA-HGQVVYTVAFSPDGELLATGTFDDETG---HLWELA 1299

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +R  +        ++   FS +G+    +   D +  ++ +D  S A   L        
Sbjct: 1300 TERHLRSF-PHEGPVVGVAFSPSGRHLS-TASWDGSGRVWGLDP-SPALVELEGHGEPIY 1356

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
                SPD   +       G        +     + + +  +       +SP    +A   
Sbjct: 1357 DLELSPDGRHLA---TAGGDNDARWWDAATWTPRAVLRGHDLDLDAVAFSPDSSTLATAG 1413

Query: 366  FSGEKFAIGVMKKDG----SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + G    +     +G    S+  L++    ++   + P G  L+ +R       ++++S 
Sbjct: 1414 WDG-VVRLWRTDPEGDVDVSERALVLGKGRIRDLAFMPGGEGLVLARDV--TKTAEIWST 1470

Query: 422  DLNGRNETL 430
                R+E L
Sbjct: 1471 AGAYRDEVL 1479



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 76/240 (31%), Gaps = 15/240 (6%)

Query: 196  MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
             D      R +    D  L    FSP+   +A A +D    L     +  +D + + +  
Sbjct: 1379 WDAATWTPRAVLRGHDLDLDAVAFSPDSSTLATAGWDGVVRLWRTDPEGDVDVSERALVL 1438

Query: 256  FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             +  I    F   G+  +++    +  +I+S                  +    SP+   
Sbjct: 1439 GKGRIRDLAFMPGGEGLVLARDVTKTAEIWSTAGAYRDEVLELEAPARRVE--VSPEGGH 1496

Query: 316  IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            ++   D +G   L+ +     + +R+      +     +SP    +A            +
Sbjct: 1497 LL-ALDEDGALSLWALPLTEDEPERV-----PTISAAAFSPGDTHLALAGRDNRIQLRAL 1550

Query: 376  MKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                 +    L      +    +SP GR L    + D      L S       ET+++ P
Sbjct: 1551 TSPTSTAAPALEGHTGPVIGLAFSPDGRRLASLSEDDSVRVWDLAS------GETIVSLP 1604


>gi|145516530|ref|XP_001444155.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411563|emb|CAK76758.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1898

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 82/225 (36%), Gaps = 23/225 (10%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            +     + +    FSP+  ++A  + D      ++L D + ++   ++  F S I    F
Sbjct: 1393 ILIGHTREIISVSFSPDGTELASCSLDK----SIFLWDVKREQQKSKLDGFTSQIKCVCF 1448

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S +G     S   D+++ ++ V +      +L       +S S SPD + +   S     
Sbjct: 1449 SPDGTTLA-SGGDDKSIRLWYV-ITGQQKAKLDGHSNGVLSVSSSPDGNTLASGS---WD 1503

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-- 383
            + + +       QK I     +      +SP G  +A      +  +I        Q   
Sbjct: 1504 KSIRLWDVKTGKQKAIFDGHTSYVQSVCFSPDGTTLA---SGSDDMSICFWNVKTGQLKD 1560

Query: 384  RLLVEDSNLQAPTWSPSG---------RSLIFSRKKDGDTGSKLY 419
            +L+   S + +  +SP G         + + F   K G    KL 
Sbjct: 1561 KLVGHTSGISSVCFSPDGTTLASCSLDKYIHFWNVKTGQLKEKLI 1605



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 47/139 (33%), Gaps = 8/139 (5%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++ SG    S+ +        +         +     SP+   +A  ++D      + L 
Sbjct: 1454 TLASGGDDKSIRLWYVITGQQKAKLDGHSNGVLSVSSSPDGNTLASGSWDK----SIRLW 1509

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTL 301
            D +  +         S + +  FS +G          + M I   ++++   + +L    
Sbjct: 1510 DVKTGKQKAIFDGHTSYVQSVCFSPDGTTLA---SGSDDMSICFWNVKTGQLKDKLVGHT 1566

Query: 302  FINISASYSPDSSQIVFES 320
                S  +SPD + +   S
Sbjct: 1567 SGISSVCFSPDGTTLASCS 1585



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 49/131 (37%), Gaps = 8/131 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++ SG    S+ + D      + +       +    FSP+   +A  + D      +  
Sbjct: 1495 NTLASGSWDKSIRLWDVKTGKQKAIFDGHTSYVQSVCFSPDGTTLASGSDDM----SICF 1550

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
             + +  +   ++    S I +  FS +G     S   D+ +  +  ++++   + +L   
Sbjct: 1551 WNVKTGQLKDKLVGHTSGISSVCFSPDGTTLA-SCSLDKYIHFW--NVKTGQLKEKLIGH 1607

Query: 301  LFINISASYSP 311
                +S  ++P
Sbjct: 1608 TSGILSVCFTP 1618



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 53/164 (32%), Gaps = 31/164 (18%)

Query: 108  AQVLVTGRVIKEGK----DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            +  +++     +G            RLWDVK  KQ   K  F          HT    + 
Sbjct: 1482 SNGVLSVSSSPDGNTLASGSWDKSIRLWDVKTGKQ---KAIFDG--------HT--SYVQ 1528

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                   G           ++ SG    S+C  +     ++         +    FSP+ 
Sbjct: 1529 SVCFSPDG----------TTLASGSDDMSICFWNVKTGQLKDKLVGHTSGISSVCFSPDG 1578

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              +A  + D      ++  + +  +  +++    S IL+  F+ 
Sbjct: 1579 TTLASCSLDK----YIHFWNVKTGQLKEKLIGHTSGILSVCFTP 1618


>gi|238754010|ref|ZP_04615369.1| hypothetical protein yruck0001_29310 [Yersinia ruckeri ATCC 29473]
 gi|238707762|gb|EEQ00121.1| hypothetical protein yruck0001_29310 [Yersinia ruckeri ATCC 29473]
          Length = 428

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 22/157 (14%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +  +   +   SPD   I     D  G  QL+
Sbjct: 276 GDSQTLPAPPLGIQQRRLTYTDKRRFPGLATTPRHWLRSSPDGRAIACLMRDDAGVVQLW 335

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++   G + ++++Q +        WSPQGD IAF + +    +I   +    + + L E 
Sbjct: 336 LVSPLGGEPQQLTQGRHDIQSAFSWSPQGDKIAFVRDN----SIAYCEVSSGRIQQLTEP 391

Query: 390 SNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSI 421
              + P+     +SP G+ + + R  DG   ++++++
Sbjct: 392 -TAEPPSGDAVVFSPDGKRIAYMRNLDG--WTQIFTV 425



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 51/132 (38%), Gaps = 12/132 (9%)

Query: 256 FRSMILAPR-F---SSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLF-INISASY 309
           F  +   PR +   S +G+     ++ D   + ++ V       ++LT     I  + S+
Sbjct: 301 FPGLATTPRHWLRSSPDGRAIACLMRDDAGVVQLWLVSPLGGEPQQLTQGRHDIQSAFSW 360

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFS 367
           SP   +I F  D      +   + +    +++++      S    V+SP G  IA+ +  
Sbjct: 361 SPQGDKIAFVRDNS----IAYCEVSSGRIQQLTEPTAEPPSGDAVVFSPDGKRIAYMRNL 416

Query: 368 GEKFAIGVMKKD 379
                I  ++  
Sbjct: 417 DGWTQIFTVEAG 428



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 50/134 (37%), Gaps = 11/134 (8%)

Query: 208 PSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                +   PR     SP+ + +A    DD  +++++L+        +       +  A 
Sbjct: 299 RRFPGLATTPRHWLRSSPDGRAIACLMRDDAGVVQLWLVSPLGGEPQQLTQGRHDIQSAF 358

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFES 320
            +S  G +            I   ++ S   ++LT       S     +SPD  +I +  
Sbjct: 359 SWSPQGDKIAFVRDNS----IAYCEVSSGRIQQLTEPTAEPPSGDAVVFSPDGKRIAYMR 414

Query: 321 DREGKEQLYVMQSN 334
           + +G  Q++ +++ 
Sbjct: 415 NLDGWTQIFTVEAG 428



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++   G   + LT  R  I     +SP   K+A+    D  I    +   RI +  +
Sbjct: 333 QLWLVSPLGGEPQQLTQGRHDIQSAFSWSPQGDKIAFV--RDNSIAYCEVSSGRIQQLTE 390

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                 S   A  FS +GKR       D    I++V+ 
Sbjct: 391 PTAEPPSGD-AVVFSPDGKRIAYMRNLDGWTQIFTVEA 427


>gi|296532601|ref|ZP_06895306.1| peptidase S9 [Roseomonas cervicalis ATCC 49957]
 gi|296267092|gb|EFH13012.1| peptidase S9 [Roseomonas cervicalis ATCC 49957]
          Length = 595

 Score = 78.9 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 87/294 (29%), Gaps = 20/294 (6%)

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
            G  RL V   L D     Q+            R      +D +        G       
Sbjct: 25  AGDGRLYV---LHDAGGSAQVWEVPPGGGAPRQRT---RHADAVAFVAGLPDGGA----- 73

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
            +     +G  +  L  +   G   R LT + + I      SP+  ++AY          
Sbjct: 74  -IFGRDGAGDERIQLYHLPPAGE-ARPLTEAPNVIHGWGALSPDGSRIAYTANARHPAHT 131

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATER- 296
              +          +           ++ +G+  L++   +     +  V L   A    
Sbjct: 132 DAWVMDLSTGTASCVAEVEGPHELLAWAPDGQSLLLATAPRTFESTLLRVALDGAAPPAD 191

Query: 297 LT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +T  +    +++  +  D S     +DR+       +Q+ G   + +             
Sbjct: 192 ITPHDGDARHLNPRWKRDGSAFWLLTDRDSDFLSVAIQAPGEAPRPL-YAPPFDVEKLEP 250

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIF 406
           SP   L+A     G    + ++           +  +  +   +WSP G SL F
Sbjct: 251 SPDQSLLAVVVNEGGYSRLRLLDAATGAVVQEPIHPEGVITKLSWSPDGASLAF 304



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 65/188 (34%), Gaps = 11/188 (5%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P F+ +G R  +      +  ++ V     A  + T         +  PD   I F  D 
Sbjct: 22  PAFAGDG-RLYVLHDAGGSAQVWEVPPGGGAPRQRTRHADAVAFVAGLPDGGAI-FGRDG 79

Query: 323 EGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKD 379
            G E++ +       + + +++     +     SP G  IA+T            VM   
Sbjct: 80  AGDERIQLYHLPPAGEARPLTEAPNVIHGWGALSPDGSRIAYTANARHPAHTDAWVMDLS 139

Query: 380 GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AY 436
                 + E +   +   W+P G+SL+ +        S L  + L+G       TP    
Sbjct: 140 TGTASCVAEVEGPHELLAWAPDGQSLLLATAPR-TFESTLLRVALDGAAPPADITPHDGD 198

Query: 437 ASD--PQW 442
           A    P+W
Sbjct: 199 ARHLNPRW 206



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 50/135 (37%), Gaps = 9/135 (6%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            ERL  T   +   +++ D    V   D  G  Q++ +   G   ++ ++  +A  F   
Sbjct: 10  LERLLTTPA-STLPAFAGDGRLYVLH-DAGGSAQVWEVPPGGGAPRQRTRHADAVAFVAG 67

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTW---SPSGRSLIFSRK 409
             P G  I F +       I +       + R L E  N+    W   SP G  + ++  
Sbjct: 68  L-PDGGAI-FGRDGAGDERIQLYHLPPAGEARPLTEAPNVIH-GWGALSPDGSRIAYTAN 124

Query: 410 KDGDTGSKLYSIDLN 424
                 +  + +DL+
Sbjct: 125 ARHPAHTDAWVMDLS 139


>gi|5051805|emb|CAB45034.1| putative WD-repeat containing protein [Amycolatopsis orientalis]
          Length = 1241

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 56/331 (16%), Positives = 106/331 (32%), Gaps = 40/331 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            GRV+  G D  +V  RLW+    ++++        A  R +A +    I   +     D 
Sbjct: 933  GRVLGTGADDRKV--RLWETSTHRELVA-PLTGHTAEVRSMAFSPQGGI---LATGSWDG 986

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
              R+   +     G                          +    FSP+   VA A  D 
Sbjct: 987  TLRLWDAANRAPIGSP-----------------LTGHVDWVRGLAFSPDGHFVATAGMDM 1029

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               +R++ + TR    P  +    + +    FS +G+    +   D+ + ++ V  +S  
Sbjct: 1030 --TVRLWNVATRAPFGP-PLTGHTNSVTGIAFSPDGRSLA-TAANDKTIRLWDVPSRSPI 1085

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             E LT    +     +SPD   +    D    + + +            +          
Sbjct: 1086 GEPLTGHTSVVRDVVFSPDGKLLASAGD---DKTVRLWDVASRTLIATLEGHTGEVLKLA 1142

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             SP G  +A T        + +    + S   +L   + L    ++P G           
Sbjct: 1143 ISPDGRELASTSLDKT---VRLWDTANRSTTTVLSASTGLAGVAYTPDG-----LVTGGV 1194

Query: 413  DTGSKLYSIDLNG-RNETLINTPAYASDPQW 442
                 L++ D+     +    T +  SD +W
Sbjct: 1195 TGNVLLWTTDVTRLAGQVCAATGSELSDDEW 1225



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 57/329 (17%), Positives = 113/329 (34%), Gaps = 47/329 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GRV+        V  RLWD+   +Q +G            +A   S D   ++     D 
Sbjct: 637 GRVLATAAGDSSV--RLWDIAS-RQPLGNPLTGHTGMVNGLA--FSPD-GTTLATASADR 690

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             R+  V+     G                          +    FS + + +   + D 
Sbjct: 691 TVRLWDVARHRPIGEP-----------------MSGHTNTVTSIAFSSDGRLLVTGSAD- 732

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +R + + +R       +G  +  I A   S +G  A  +   D+ + +++V  ++  
Sbjct: 733 -GTVRTWDITSRTPIGEPMVG-HKGPITAVALSPDGVTAA-TSSNDKTVRLWNVATRAPI 789

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--ISQDKEASYFD 351
            + LT    +    ++SPD   +   S   G + + +            ++     +Y  
Sbjct: 790 GDPLTGHTSVTNGVAFSPDGQILASTS---GDKTVRLWNVATRAPIGDPLTGHTNVTYGV 846

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSR 408
             +SP G  +A + +      + +      +++   L+   S++    +SP G +L    
Sbjct: 847 -AFSPDGRTLATSSWDKT---VRIWDTTSRRQQGTALIGSTSSVFNIAFSPDGSALA--- 899

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              GD+ S      L G   TL+   A A
Sbjct: 900 --GGDSDSSTLVWSLRG---TLVPAHADA 923



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 71/198 (35%), Gaps = 10/198 (5%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A+    D    R  L+  +    P R+      +    FS +G+    +   D ++ ++
Sbjct: 594 IAWQIAPDVPATRDSLLSVQAYPLPTRLLGHTGEVRDVAFSPDGRVLA-TAAGDSSVRLW 652

Query: 286 SVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
             D+ S       LT    +    ++SPD + +   +  +   +L+ +  +    + +S 
Sbjct: 653 --DIASRQPLGNPLTGHTGMVNGLAFSPDGTTLA-TASADRTVRLWDVARHRPIGEPMS- 708

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
               +     +S  G L+      G      +  +    E ++     + A   SP G  
Sbjct: 709 GHTNTVTSIAFSSDGRLLVTGSADGTVRTWDITSRTPIGEPMVGHKGPITAVALSPDG-- 766

Query: 404 LIFSRKKDGDTGSKLYSI 421
            + +     D   +L+++
Sbjct: 767 -VTAATSSNDKTVRLWNV 783


>gi|309790803|ref|ZP_07685347.1| serine/threonine protein kinase with WD40 repeats [Oscillochloris
           trichoides DG6]
 gi|308227090|gb|EFO80774.1| serine/threonine protein kinase with WD40 repeats [Oscillochloris
           trichoides DG6]
          Length = 832

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 77/226 (34%), Gaps = 24/226 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A +  D++    V + +    +   R+      + +  FS +G     S  
Sbjct: 288 AFSPDSRWLASSAQDEQ---EVLIWNATTGQERMRLQGHTGWVRSLAFSPDGTLLA-SGS 343

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY-------V 330
            D  + ++ V     A   L        S +++PD  ++   + R+G  +++       V
Sbjct: 344 IDTTVRLWDV-ATGRALGVLEGHTDYLGSIAFAPDGRRLASTA-RDGTVRVWDVATQQPV 401

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                      +           +SP G  IA    S     I ++     Q    +   
Sbjct: 402 AGFAFRAPINPTTGAPYWLTGIDYSPDGTHIAVGSVSNS---IYILDATTGQLLRELRGH 458

Query: 391 NLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                    ++SP G +L  +     D   +L+   + G  + ++ 
Sbjct: 459 KDWVVIRGLSYSPDGSTLASAST---DGTLRLWD-PITGSEQAVLT 500



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 87/271 (32%), Gaps = 25/271 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG I  ++ + D        +       L    F+P+ +++A    D    +RV+ + T+
Sbjct: 341 SGSIDTTVRLWDVATGRALGVLEGHTDYLGSIAFAPDGRRLASTARD--GTVRVWDVATQ 398

Query: 246 I-------DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
                                +    +S +G    +    +    IY +D  +    R L
Sbjct: 399 QPVAGFAFRAPINPTTGAPYWLTGIDYSPDGTHIAVGSVSN---SIYILDATTGQLLREL 455

Query: 298 TNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                  +    SYSPD S +   S  +G  +L+        ++ +  ++        W+
Sbjct: 456 RGHKDWVVIRGLSYSPDGSTLASAST-DGTLRLW--DPITGSEQAVLTERSMRLLGFSWA 512

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                +      G    +   +    +  +L+    + A  +S    +++ S    G   
Sbjct: 513 TDSQHLVTASDVGGALTVWNTQTRKIERTILLAQGVVTALAYS-DSGAVLGSGGASGTVR 571

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
             +        ++  +N        Q++ F+
Sbjct: 572 LHIL------GDDRQVNINGGLPTNQFIAFL 596



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 77/223 (34%), Gaps = 9/223 (4%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++D  G    +     + +      S +++ +A       +  +V + D +  +  +
Sbjct: 609 EVVIIDLSGQYRNHELAGLEGVAVSVVVSRDRKLIA----AGSNTGQVVIWDAQTFKPIR 664

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYS 310
            +   +   +   F+ +  R   +   D +  I+  + QS   + +       I+A   +
Sbjct: 665 TLSGVQGPAVLLAFNRDASRLAAATNADGSAAIHVWNAQSGTEQIVIPNPQTQITALDLT 724

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGE 369
            +   +V  S   GK   +   ++GS+ + I+      +F     SP   L+      G 
Sbjct: 725 ANGDMLVSASS-NGKLTFWRT-ADGSEVRSINAPTNERWFSSVALSPNATLLVTGSLIGT 782

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
                  +       + +    + A  + P GR +  S    G
Sbjct: 783 -LEFWDAQSGTRLGGISLATGQVMAMAFRPDGRQIAVSTFDGG 824


>gi|148554016|ref|YP_001261598.1| peptidase S9 prolyl oligopeptidase [Sphingomonas wittichii RW1]
 gi|148499206|gb|ABQ67460.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Sphingomonas wittichii RW1]
          Length = 680

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 97/319 (30%), Gaps = 72/319 (22%)

Query: 186 SGIIKNSLCVMD--RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           +   +  L  +D  R GA    L     +    P FSP+ Q V +   +           
Sbjct: 58  ANKGRTDLWRLDLSRKGAVPEKLAADPAKSESGPAFSPDGQWVFFTADNGGK--SAVWRV 115

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK------------------------- 278
                AP+ + +    +   R +  G + L+   +                         
Sbjct: 116 AIAGGAPELVADQD--VSGFRIAPTGDKLLVWADRPVGAKSLADKAASKDGGSARTYDHY 173

Query: 279 ----------DEAMDIYSVDLQSNATE---------RLTNTL----FINISASYSPDSSQ 315
                      +   ++ + L                + +T           ++S D   
Sbjct: 174 FVRHWDTWSDGQRSQLFVLPLAGGKATGDGVAIGGALVGDTPSKPFGDGSEIAWSKDGRT 233

Query: 316 IVFESDREGKEQ-------LYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + F     G  +       ++   ++GS     +++  +A+   P  SP G  +A+    
Sbjct: 234 VYFTLREAGTTEPLSTNLDIFAAPADGSAAPVNLTEANQATDTLPTVSPDGKWLAYVAMK 293

Query: 368 GEKFA-----IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              +      I +      + R L E  +  + +  WS  G++L  + +  GD    +++
Sbjct: 294 RPTYEADRQVIQLRNLATGEVRALTEGWDRSVGSLAWSRDGKTLYATAQDTGD--DAVFA 351

Query: 421 IDL-NGRNETLINTPAYAS 438
           +DL  G+   L      A 
Sbjct: 352 VDLATGKPARLTGEGTAAG 370



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 75/262 (28%), Gaps = 18/262 (6%)

Query: 146 SSPASWRKIAHTISDDIY--QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
              A WR      + ++   Q ++G +       L V      G    +     +DG + 
Sbjct: 108 GKSAVWRVAIAGGAPELVADQDVSGFRIAPTGDKLLVWADRPVGAKSLADKAASKDGGSA 167

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R  T     +     +S  Q+   +             +                     
Sbjct: 168 R--TYDHYFVRHWDTWSDGQRSQLFVLPLAGGKATGDGVAIGGALVGDTPSKPFGDGSEI 225

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQ--------SNATERLT-NTLFINISASYSPDSS 314
            +S +G+    ++++    +  S +L         S A   LT      +   + SPD  
Sbjct: 226 AWSKDGRTVYFTLREAGTTEPLSTNLDIFAAPADGSAAPVNLTEANQATDTLPTVSPDGK 285

Query: 315 QIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            + + +         ++ + +      + + +++  + S     WS  G  +  T     
Sbjct: 286 WLAYVAMKRPTYEADRQVIQLRNLATGEVRALTEGWDRSVGSLAWSRDGKTLYATAQDTG 345

Query: 370 KFAIGVMKKDGSQERLLVEDSN 391
             A+  +     +   L  +  
Sbjct: 346 DDAVFAVDLATGKPARLTGEGT 367



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 94/266 (35%), Gaps = 55/266 (20%)

Query: 220 SPNQQKVAYATYD-----DEDILRVYLMDT-RIDRAPKRIGNFRS-MILAPRFSSNGKRA 272
           SP+ + + +   +     ++    ++ +D  R    P+++    +     P FS +G+  
Sbjct: 41  SPDGRWLVWDQRETDMAANKGRTDLWRLDLSRKGAVPEKLAADPAKSESGPAFSPDGQWV 100

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE-GKEQL-- 328
             +        ++ V +   A E + +    ++S    +P   +++  +DR  G + L  
Sbjct: 101 FFTADNGGKSAVWRVAIAGGAPELVADQ---DVSGFRIAPTGDKLLVWADRPVGAKSLAD 157

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---- 384
                +G   +  + D         WS            G++  + V+   G +      
Sbjct: 158 KAASKDGGSAR--TYDHYFVRHWDTWS-----------DGQRSQLFVLPLAGGKATGDGV 204

Query: 385 ----LLVED------SNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNGR--- 426
                LV D       +     WS  GR++ F+ ++ G      T   +++   +G    
Sbjct: 205 AIGGALVGDTPSKPFGDGSEIAWSKDGRTVYFTLREAGTTEPLSTNLDIFAAPADGSAAP 264

Query: 427 ------NETLINTPAYASDPQWVGFM 446
                 N+     P  + D +W+ ++
Sbjct: 265 VNLTEANQATDTLPTVSPDGKWLAYV 290



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 62/197 (31%), Gaps = 12/197 (6%)

Query: 192 SLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRI 246
            +     DG A    LT +       P  SP+ + +AY          D   + L +   
Sbjct: 252 DIFAAPADGSAAPVNLTEANQATDTLPTVSPDGKWLAYVAMKRPTYEADRQVIQLRNLAT 311

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                    +   + +  +S +GK    + Q      +++VDL +    RLT       +
Sbjct: 312 GEVRALTEGWDRSVGSLAWSRDGKTLYATAQDTGDDAVFAVDLATGKPARLT---GEGTA 368

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSN---GSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           A         V+  +       +   +    G    R++   +         P  + + F
Sbjct: 369 AGVLATPRGYVYTLNSLTAPSDFYAGTGVKAGGKPTRLTWVNKDKLAGIDM-PGVEHVGF 427

Query: 364 TKFSGEKFAIGVMKKDG 380
              +G+     VMK  G
Sbjct: 428 KGANGDTVWAYVMKPAG 444


>gi|86739038|ref|YP_479438.1| WD-40 repeat-containing protein [Frankia sp. CcI3]
 gi|86565900|gb|ABD09709.1| WD-40 repeat-containing protein [Frankia sp. CcI3]
          Length = 872

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 82/243 (33%), Gaps = 20/243 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R      ++ +    FSP+ + +A  + D   +  V    T +  + ++          
Sbjct: 584 ARATLKGHERDVTSAAFSPDGKLLATTSKDGTRLWDVATGRTSVTLSGRKSLVVHGC--- 640

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-D 321
             FSS+GK    +   D+   I+ VD     T  LT         ++SPD S +   S D
Sbjct: 641 -AFSSDGKLLATTGS-DKTARIWDVDAA-RQTVTLTGHRGPVYGCAFSPDGSLLATTSTD 697

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R     + +  S+             S +   +SP G L+           +  +     
Sbjct: 698 RT----VRLWGSSTGKNLATLNGHRGSVYGCAFSPDGRLLVTAGAESTL--LWNVTVGEI 751

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              L    +      +SP GR L       G+ G++L   D +    T++  P  A    
Sbjct: 752 IMSLPGHTNFAGGCAFSPDGRLLA----TSGNEGTRL--TDASSGT-TVLTLPGSAQSCA 804

Query: 442 WVG 444
           +  
Sbjct: 805 FSP 807



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 91/293 (31%), Gaps = 40/293 (13%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWDV   +  +      S      + H  +             F+S    ++ +     
Sbjct: 616 RLWDVATGRTSVTLSGRKS-----LVVHGCA-------------FSSDGKLLATTGSDKT 657

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +    + D D A            ++   FSP+   +A  + D      V L  +   +
Sbjct: 658 AR----IWDVDAARQTVTLTGHRGPVYGCAFSPDGSLLATTSTDR----TVRLWGSSTGK 709

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
               +   R  +    FS +G+  + +  +   +   +V         L          +
Sbjct: 710 NLATLNGHRGSVYGCAFSPDGRLLVTAGAESTLLWNVTV---GEIIMSLPGHTNFAGGCA 766

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +   S  EG      +    S    ++     S     +SP G L+A      
Sbjct: 767 FSPDGRLLA-TSGNEGT----RLTDASSGTTVLTL--PGSAQSCAFSPDGHLLATASTDD 819

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +  +    +   L    S + +  ++P G  L  +     D  ++L+ I
Sbjct: 820 TA-QLWDVATGSAIATLTGHSSTVMSCAFAPYGLLLATTST---DMTARLWDI 868


>gi|226312266|ref|YP_002772160.1| hypothetical protein BBR47_26790 [Brevibacillus brevis NBRC 100599]
 gi|226095214|dbj|BAH43656.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 599

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 96/259 (37%), Gaps = 10/259 (3%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMDT 244
            G  +    ++  +GA ++ LT + D   +   +SP +QK+A+++   +     +++ D 
Sbjct: 74  KGDERQQFFLLTENGAVVKPLTDAPDYFHYLGGWSPCRQKIAWSSNRRNPRSFDIFVQDV 133

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-IYSVDLQSNATERLT--NTL 301
                 + +  +        +  +G+  + SVQ+    + +Y ++LQ+   ++L+  N  
Sbjct: 134 ESGAYEE-VFRYDGRTDPIGWLPDGRGLIFSVQETNIDNCLYLLNLQTKEAQKLSICNKH 192

Query: 302 FINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               S   S D       +DR+   + L        +  ++  D +        SP    
Sbjct: 193 ARYHSLVLSKDGQTGYLVTDRDDNTKALCRFSLRTGELDKLVHDPKWDMEATQLSPDEKF 252

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +AFT   G    + +        + + E     + +  W      L ++ K        +
Sbjct: 253 LAFTINEGGYSVLALYSLTEQSWKRVEEAPRGVISSLAWVND-DQLAYTLKSP-TLPGDI 310

Query: 419 YSIDLNGRNETLINTPAYA 437
           ++  L+ +    +     +
Sbjct: 311 WTYTLSEQTSRRVTNIGQS 329



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 73/171 (42%), Gaps = 6/171 (3%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-- 324
              +      +      ++  + +SN +E++T      +   +SP  ++ +   D +G  
Sbjct: 18  PERREITFLTKLTGIAQLWRWNEESNRSEQVTFLPDRVVEVDHSPCGTKTIVGMDNKGDE 77

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKK-DGS 381
           ++Q +++  NG+  K ++   +  ++   WSP    IA++  + +   F I V     G+
Sbjct: 78  RQQFFLLTENGAVVKPLTDAPDYFHYLGGWSPCRQKIAWSSNRRNPRSFDIFVQDVESGA 137

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            E +   D       W P GR LIFS ++       LY ++L  +    ++
Sbjct: 138 YEEVFRYDGRTDPIGWLPDGRGLIFSVQETNIDNC-LYLLNLQTKEAQKLS 187



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 77/212 (36%), Gaps = 10/212 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQ 277
            SP   K      +  D  + + + T      K + +          +S   ++   S  
Sbjct: 60  HSPCGTKTIVGMDNKGDERQQFFLLTENGAVVKPLTDAPDYFHYLGGWSPCRQKIAWSSN 119

Query: 278 K--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSN 334
           +    + DI+  D++S A E +           + PD   ++F       +  LY++   
Sbjct: 120 RRNPRSFDIFVQDVESGAYEEVFRYDGRTDPIGWLPDGRGLIFSVQETNIDNCLYLLNLQ 179

Query: 335 GSDQKRISQ-DKEASYFDPVWSPQGD--LIAFTKFSGEKFAIGVMKKDGSQERLLVED-- 389
             + +++S  +K A Y   V S  G    +  T       A+        +   LV D  
Sbjct: 180 TKEAQKLSICNKHARYHSLVLSKDGQTGYLV-TDRDDNTKALCRFSLRTGELDKLVHDPK 238

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +++A   SP  + L F+  + G +   LYS+
Sbjct: 239 WDMEATQLSPDEKFLAFTINEGGYSVLALYSL 270



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 78/237 (32%), Gaps = 9/237 (3%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           + D +  + G       +I + S           +  ++       +    R   +    
Sbjct: 97  APDYFHYLGGWS-PCRQKIAWSSNRRNPRSFDIFVQDVESGAYEEVFRYDGRTDPIG--- 152

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQ 277
           + P+ + + ++  +      +YL++ +   A K  I N  +   +   S +G+   +   
Sbjct: 153 WLPDGRGLIFSVQETNIDNCLYLLNLQTKEAQKLSICNKHARYHSLVLSKDGQTGYLVTD 212

Query: 278 KDEAMD-IYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNG 335
           +D+    +    L++   ++L +    ++ A+  SPD   + F  +  G   L +     
Sbjct: 213 RDDNTKALCRFSLRTGELDKLVHDPKWDMEATQLSPDEKFLAFTINEGGYSVLALYSLTE 272

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVEDSN 391
              KR+ +          W    D +A+T  S      I          R +     
Sbjct: 273 QSWKRVEEAPRGVISSLAWVND-DQLAYTLKSPTLPGDIWTYTLSEQTSRRVTNIGQ 328



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 53/140 (37%), Gaps = 8/140 (5%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL--IAFTKFSG 368
           P+  +I F +   G  QL+      +  ++++   +        SP G    +       
Sbjct: 18  PERREITFLTKLTGIAQLWRWNEESNRSEQVTFLPDRVVEVDH-SPCGTKTIVGMDNKGD 76

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NG 425
           E+    ++ ++G+  + L +  +       WSP  + + +S  +       ++  D+ +G
Sbjct: 77  ERQQFFLLTENGAVVKPLTDAPDYFHYLGGWSPCRQKIAWSSNRRNPRSFDIFVQDVESG 136

Query: 426 RNETLINTPAYASDPQ-WVG 444
             E +       +DP  W+ 
Sbjct: 137 AYEEVFRYDGR-TDPIGWLP 155


>gi|114563326|ref|YP_750839.1| peptidase S9 prolyl oligopeptidase [Shewanella frigidimarina NCIMB
           400]
 gi|114334619|gb|ABI72001.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella frigidimarina NCIMB 400]
          Length = 686

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/301 (13%), Positives = 85/301 (28%), Gaps = 71/301 (23%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAY----ATYDDEDILRVYLMDT-RIDRAPKRIGN 255
            N++ L       L     S + + + Y         E    +YL+D    +  PK++ +
Sbjct: 30  FNVQQLVNLNK--LHSAAVSNDGKTMVYGVKVVDDKGEGSSDLYLLDLNDKNAKPKQLTS 87

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                    FS +GK       +     +Y + L       +T+          S D  Q
Sbjct: 88  AAGTEHDVSFSPDGKSIYFLASRSGTSQLYQLALDGGEAIAVTDLPLDINGYKLSNDGKQ 147

Query: 316 IV------------------FESDREGK----------------------EQLYVMQSNG 335
           +V                  F ++ E K                        L+V   NG
Sbjct: 148 VVMTLRVFPECKDLACSKDKFTAEAERKSTGREYKQLMVRHWDTWEDHARNHLFVASLNG 207

Query: 336 SDQKRISQDKEASYFDP-----------VWSPQGDLIAFTKFSG-------EKFAIGVMK 377
           +     +        +             ++  G  + ++  +          + +  + 
Sbjct: 208 NKITTATNVTAGRDTETPPKPFSGMEEVTFTADGKYVVYSAKAPSRDQAWTTNYDLWQVP 267

Query: 378 KDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSI----DLNGRNETLI 431
             G +   L  D+      PT+S  GR L +         +  Y I    ++ G+ + + 
Sbjct: 268 VAGGETVNLTPDNQAWDAQPTFSADGRYLAYLAMSKAGYEADRYRIMLRDNVTGQEKEVA 327

Query: 432 N 432
            
Sbjct: 328 P 328



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 97/313 (30%), Gaps = 69/313 (22%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRFSPNQQKV 226
               D  + +  V      G   + L ++D +  N +     S      +  FSP+ + +
Sbjct: 45  AVSNDGKTMVYGVKVVDDKGEGSSDLYLLDLNDKNAKPKQLTSAAGTEHDVSFSPDGKSI 104

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------- 277
            +         ++Y +      A   + +    I   + S++GK+ +++++         
Sbjct: 105 YFLASRSG-TSQLYQLALDGGEAIA-VTDLPLDINGYKLSNDGKQVVMTLRVFPECKDLA 162

Query: 278 -------------------------------KDEAMDIYSVDLQSNA---TERLTNTLFI 303
                                                ++   L  N       +T     
Sbjct: 163 CSKDKFTAEAERKSTGREYKQLMVRHWDTWEDHARNHLFVASLNGNKITTATNVTAGRDT 222

Query: 304 NISA---------SYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQKRISQDKEA 347
                        +++ D   +V+ +    ++Q +    +       G +   ++ D +A
Sbjct: 223 ETPPKPFSGMEEVTFTADGKYVVYSAKAPSRDQAWTTNYDLWQVPVAGGETVNLTPDNQA 282

Query: 348 SYFDPVWSPQGDLIAFTKFSG-----EKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPS 400
               P +S  G  +A+   S      +++ I +      QE+ +    +  A +  +S  
Sbjct: 283 WDAQPTFSADGRYLAYLAMSKAGYEADRYRIMLRDNVTGQEKEVAPLWDRSASSLNFSAD 342

Query: 401 GRSLIFSRKKDGD 413
           GR+L  + +  G 
Sbjct: 343 GRTLYVTAQDLGQ 355



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 8/161 (4%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD----DEDILRVYLMD 243
                L  +   G     LTP       +P FS + + +AY        + D  R+ L D
Sbjct: 258 TTNYDLWQVPVAGGETVNLTPDNQAWDAQPTFSADGRYLAYLAMSKAGYEADRYRIMLRD 317

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +  +    +     +  FS++G+   ++ Q    + I+ V+ Q      + N    
Sbjct: 318 NVTGQEKEVAPLWDRSASSLNFSADGRTLYVTAQDLGQVTIFEVNTQFGDVRPIYNQGSN 377

Query: 304 NISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQ 343
           ++ A  S   ++++F +S       L+ +   G   K+++ 
Sbjct: 378 SLVAVTS---NRLIFKKSSLVEPGDLFSVSLEGEQLKQLTN 415



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/185 (12%), Positives = 58/185 (31%), Gaps = 19/185 (10%)

Query: 218 RFSPNQQKVAYATYDDED------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            F+ + + V Y+               ++ +            + ++    P FS++G+ 
Sbjct: 236 TFTADGKYVVYSAKAPSRDQAWTTNYDLWQVPVAGGETVNLTPDNQAWDAQPTFSADGRY 295

Query: 272 ALI-----SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDRE 323
                   +  + +   I   D  +   + +      + SAS   +S D   +   +   
Sbjct: 296 LAYLAMSKAGYEADRYRIMLRDNVTGQEKEV--APLWDRSASSLNFSADGRTLYVTAQDL 353

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G+  ++ + +   D + I      S      +    LI       E   +  +  +G Q 
Sbjct: 354 GQVTIFEVNTQFGDVRPIYNQGSNSLVAVTSN---RLIFKKSSLVEPGDLFSVSLEGEQL 410

Query: 384 RLLVE 388
           + L  
Sbjct: 411 KQLTN 415


>gi|254415380|ref|ZP_05029141.1| hypothetical protein MC7420_3304 [Microcoleus chthonoplastes PCC
           7420]
 gi|196177855|gb|EDX72858.1| hypothetical protein MC7420_3304 [Microcoleus chthonoplastes PCC
           7420]
          Length = 404

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 81/224 (36%), Gaps = 17/224 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ +   DG  ++ L      +     FSP  Q +A  + D      V L  T 
Sbjct: 146 SASGDKTIKLWQSDGTLLKTLRKHSSGVYTV-AFSPEGQLLASGSGDQ----TVKLW-TG 199

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  K +     ++    FS +G+    S  +D+ + +++ D        LT       
Sbjct: 200 EGQLLKTLTGHTGIVFDVVFSPDGQLIA-SGGEDKTIKLWTRD--GTLLNTLTGHDDSIR 256

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + ++SPDS ++   S       + +   +G+    +            +SP G  +A   
Sbjct: 257 ALAFSPDSQRLASAS---WDNTIKLWTRDGTLLATL-DGHRDRVNGIAFSPDGRFLASAS 312

Query: 366 FSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSR 408
                  + + + DG+    L      +   T+SP GR+L  + 
Sbjct: 313 LDKT---VKLWRDDGTLLVTLEAHGDRVYDVTFSPDGRTLASAS 353



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 67/182 (36%), Gaps = 13/182 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +G  ++ LT     I+F+  FSP+ Q +A  +  ++  ++++   TR
Sbjct: 187 SGSGDQTVKLWTGEGQLLKTLT-GHTGIVFDVVFSPDGQLIA--SGGEDKTIKLW---TR 240

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +      I A  FS + +R   S   D  + +++ D        L        
Sbjct: 241 DGTLLNTLTGHDDSIRALAFSPDSQRLA-SASWDNTIKLWTRD--GTLLATLDGHRDRVN 297

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++SPD   +   S     ++   +  +        +      +D  +SP G  +A   
Sbjct: 298 GIAFSPDGRFLASAS----LDKTVKLWRDDGTLLVTLEAHGDRVYDVTFSPDGRTLASAS 353

Query: 366 FS 367
             
Sbjct: 354 VD 355



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 77/231 (33%), Gaps = 22/231 (9%)

Query: 91  ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
           I +       + W S      +   + K       V F      + + +       +   
Sbjct: 144 IASASGDKTIKLWQS---DGTLLKTLRKHSSGVYTVAFS----PEGQLLASGSGDQTVKL 196

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPS 209
           W          + +++TG  G     +       + SG    ++ +  RDG  +  LT  
Sbjct: 197 WTGEG-----QLLKTLTGHTGIVFDVVFSPDGQLIASGGEDKTIKLWTRDGTLLNTLTGH 251

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            D I     FSP+ Q++A A++D+     + L  TR       +   R  +    FS +G
Sbjct: 252 DDSIRAL-AFSPDSQRLASASWDN----TIKLW-TRDGTLLATLDGHRDRVNGIAFSPDG 305

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +    S   D+ + ++  D        L          ++SPD   +   S
Sbjct: 306 RFLA-SASLDKTVKLWRDD--GTLLVTLEAHGDRVYDVTFSPDGRTLASAS 353



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 59/324 (18%), Positives = 107/324 (33%), Gaps = 89/324 (27%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +   DG  +  +       L+   FSP+ Q +A A+ D      + L   +       + 
Sbjct: 1   MWQIDGTELA-VLKGHQNGLWAAAFSPDCQMLASASLDS----TIKLWTPKKTLLT-FLQ 54

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ------------------------ 290
             +  +    FS + +  + S   D A+ ++  D Q                        
Sbjct: 55  GHQDAVWGVDFSPDSQTLV-SGSWDGAIKLWRRDGQVLKSFEGHDEAVFDVAVAPPVKAN 113

Query: 291 -----------------SNATERLTNTLFINISAS-------YSPDSS------------ 314
                            S + E L     I  SAS       +  D +            
Sbjct: 114 FPSENGRVNKKEKNQGKSKSIELLPTPELIIASASGDKTIKLWQSDGTLLKTLRKHSSGV 173

Query: 315 -QIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             + F       +   G + + +    G   K ++       FD V+SP G LIA     
Sbjct: 174 YTVAFSPEGQLLASGSGDQTVKLWTGEGQLLKTLT-GHTGIVFDVVFSPDGQLIA---SG 229

Query: 368 GEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID---- 422
           GE   I +  +DG+    L   D +++A  +SP  + L  +     D   KL++ D    
Sbjct: 230 GEDKTIKLWTRDGTLLNTLTGHDDSIRALAFSPDSQRLASASW---DNTIKLWTRDGTLL 286

Query: 423 --LNGRNETLINTPAYASDPQWVG 444
             L+G  +  +N  A++ D +++ 
Sbjct: 287 ATLDGHRDR-VNGIAFSPDGRFLA 309


>gi|108762678|ref|YP_628563.1| putative lipoprotein [Myxococcus xanthus DK 1622]
 gi|108466558|gb|ABF91743.1| putative lipoprotein [Myxococcus xanthus DK 1622]
          Length = 320

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 82/242 (33%), Gaps = 25/242 (10%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +  A+   DD ++  V   D     +P+R+ N       P  S +G+  +   +      
Sbjct: 41  RGFAFVREDDRNVYVVD--DGGDANSPQRLTNVGGAYW-PSVSRDGRSVVFVQRSGGTTT 97

Query: 284 IYSVDLQSNATERLTNTL--------FINISASYSPDSSQIVFESDREGKEQ--LYVMQS 333
           + +V         L                + ++SPD   +VF        Q  L  + +
Sbjct: 98  LLTVPTSGGTPSTLFRANDSTCARGCSNFRTPTFSPDGRSVVFVFSPGNSSQTALARINT 157

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLVEDSN 391
           +GS  + ++ +   +Y  P + P G  +     SG      +  +  +G         + 
Sbjct: 158 DGSGFQELTPNNVIAYGAPSFVPNGGAVLAGAGSGLNQLDQLAHVPLNGGTITYSSLSAG 217

Query: 392 LQA----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-----ETLINTPAYASDPQW 442
           +Q        SP+G  +     +    G++++   L+G N        I      S P W
Sbjct: 218 VQFVENRVAVSPNGSQVA-LDGRLSSGGTRIFVAQLSGSNVGALQRVTIGGAGEESWPSW 276

Query: 443 VG 444
            G
Sbjct: 277 TG 278



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 92/274 (33%), Gaps = 23/274 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             ++ V+D  G        +     + P  S + + V +          + +  +    +
Sbjct: 50  DRNVYVVDDGGDANSPQRLTNVGGAYWPSVSRDGRSVVFVQRSGGTTTLLTVPTSGGTPS 109

Query: 250 PKRIGNFR------SMILAPRFSSNGKRALISVQKDEAMD--IYSVDLQSNATERLTNTL 301
                N        S    P FS +G+  +       +    +  ++   +  + LT   
Sbjct: 110 TLFRANDSTCARGCSNFRTPTFSPDGRSVVFVFSPGNSSQTALARINTDGSGFQELTPNN 169

Query: 302 FINIS-ASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQK--RISQDKEASYFDPVWSP 356
            I     S+ P+   ++  +     +  QL  +  NG       +S   +        SP
Sbjct: 170 VIAYGAPSFVPNGGAVLAGAGSGLNQLDQLAHVPLNGGTITYSSLSAGVQFVENRVAVSP 229

Query: 357 QGDLIAF-TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQA-PTWSPSGRSLIFSRKK 410
            G  +A   + S     I V +  GS      R+ +  +  ++ P+W+ + +        
Sbjct: 230 NGSQVALDGRLSSGGTRIFVAQLSGSNVGALQRVTIGGAGEESWPSWTGASQLGFLISAG 289

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             DTG  +Y  +L+  + +L      A++P +  
Sbjct: 290 GSDTG--IYRANLSTGSVSLAVP--SATEPSYGP 319



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 164 QSITGEKGDFNSRI-------LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           Q +T   G +   +       +FV  S  +     +L  +   G     L  + D     
Sbjct: 66  QRLTNVGGAYWPSVSRDGRSVVFVQRSGGT----TTLLTVPTSGGTPSTLFRANDSTCAR 121

Query: 217 -------PRFSPNQQKVAYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAPRFSSN 268
                  P FSP+ + V +              ++T      +   N      AP F  N
Sbjct: 122 GCSNFRTPTFSPDGRSVVFVFSPGNSSQTALARINTDGSGFQELTPNNVIAYGAPSFVPN 181

Query: 269 GKRALISVQKDE---AMDIYSVDLQSNATER--LTNT-LFINISASYSPDSSQIVFESD- 321
           G  A+++           +  V L         L+    F+    + SP+ SQ+  +   
Sbjct: 182 GG-AVLAGAGSGLNQLDQLAHVPLNGGTITYSSLSAGVQFVENRVAVSPNGSQVALDGRL 240

Query: 322 REGKEQLYVMQSNGSDQ---KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             G  +++V Q +GS+    +R++         P W+    L       G    I     
Sbjct: 241 SSGGTRIFVAQLSGSNVGALQRVTIGGAGEESWPSWTGASQLGFLISAGGSDTGIYRANL 300

Query: 379 DGSQERLLVEDSNLQAPTWSP 399
                 L V  +    P++ P
Sbjct: 301 STGSVSLAVPSAT--EPSYGP 319


>gi|326772403|ref|ZP_08231687.1| vegetative incompatibility protein HET-E-1 [Actinomyces viscosus
           C505]
 gi|326637035|gb|EGE37937.1| vegetative incompatibility protein HET-E-1 [Actinomyces viscosus
           C505]
          Length = 1026

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 90/257 (35%), Gaps = 26/257 (10%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V D      R    +  + L E  +SP+  ++A ++Y      RV ++D       + +
Sbjct: 52  RVWDATTGQPRLTVDNGARELSEVVWSPDGTRLATSSYLS---PRVLILDASTGDVVQAL 108

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSP 311
                 +    +S + +R L +   D+   I+  D        LT     +   S ++SP
Sbjct: 109 TAGEDDVNDIAWSPDSERIL-TGLGDDRAAIW--DAA-RGERLLTLEGHSDMITSVAWSP 164

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +  Q      ++G  +++   +   +   I         D VW+  G  +      G   
Sbjct: 165 NG-QRALTGSQDGTARIW--DAATGEV--IHTYTGNWVRDVVWTQGGPRVVTGSADGAAH 219

Query: 372 AIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
              V+     +   L +D+ + ++  WSP G  ++            +  +      + +
Sbjct: 220 VWDVI--TSGELVTLRDDAAMVRSYAWSPDGTKVL------AGFDDGVVRVWDEVSGKVV 271

Query: 431 INTPAY---ASDPQWVG 444
           ++   +    +D QW  
Sbjct: 272 LSLAGHRFGVTDAQWSP 288



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 79/219 (36%), Gaps = 23/219 (10%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           AT   +D +RV+   T      + +    + +    +S +G R  I  +          D
Sbjct: 2   ATGSHDDTVRVWDAAT---GQTQLVLGAGNSVETVSWSPDGTRLSIGAKIGGNR---VWD 55

Query: 289 LQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
             +    RLT            +SPD +++   S      ++ ++ ++  D  +     E
Sbjct: 56  ATTGQP-RLTVDNGARELSEVVWSPDGTRLATSSYLS--PRVLILDASTGDVVQALTAGE 112

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRS 403
               D  WSP  + I  T    ++ AI         ERLL  + +     +  WSP+G+ 
Sbjct: 113 DDVNDIAWSPDSERIL-TGLGDDRAAIW---DAARGERLLTLEGHSDMITSVAWSPNGQR 168

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
              +  +DG   ++++  D          T  +  D  W
Sbjct: 169 -ALTGSQDGT--ARIW--DAATGEVIHTYTGNWVRDVVW 202



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 95/308 (30%), Gaps = 37/308 (12%)

Query: 120 GKDRLRVEFRLWDVKDRKQ--IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
                    R+WD    +   ++G        SW      +S  I   I G +  +++  
Sbjct: 2   ATGSHDDTVRVWDAATGQTQLVLGAGNSVETVSWSPDGTRLS--IGAKIGGNR-VWDATT 58

Query: 178 LFVSESVVSGIIKNSLCVMDRDG--------------------ANIRYLTPSRDQILFEP 217
                +V +G  + S  V   DG                     ++     + +  + + 
Sbjct: 59  GQPRLTVDNGARELSEVVWSPDGTRLATSSYLSPRVLILDASTGDVVQALTAGEDDVNDI 118

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ +++     DD    R  + D         +     MI +  +S NG+R  ++  
Sbjct: 119 AWSPDSERILTGLGDD----RAAIWDAARGERLLTLEGHSDMITSVAWSPNGQR-ALTGS 173

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D    I+  D  +      T T        ++    ++V     +G   ++      S 
Sbjct: 174 QDGTARIW--DAATGEVIH-TYTGNWVRDVVWTQGGPRVV-TGSADGAAHVW--DVITSG 227

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +    +D  A      WSP G  +    F      +           L      +    W
Sbjct: 228 ELVTLRDDAAMVRSYAWSPDGTKVL-AGFDDGVVRVWDEVSGKVVLSLAGHRFGVTDAQW 286

Query: 398 SPSGRSLI 405
           SP G  ++
Sbjct: 287 SPDGTRIL 294



 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 61/175 (34%), Gaps = 18/175 (10%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQS 333
           +   D+ + ++  D  +    +L      ++   S+SPD +++   +   G     V  +
Sbjct: 3   TGSHDDTVRVW--DAATGQ-TQLVLGAGNSVETVSWSPDGTRLSIGAKIGGN---RVWDA 56

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL- 392
                +    +      + VWSP G  +A + +   +  I +    G   + L    +  
Sbjct: 57  TTGQPRLTVDNGARELSEVVWSPDGTRLATSSYLSPRVLI-LDASTGDVVQALTAGEDDV 115

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA---SDPQWVG 444
               WSP    ++      GD  + ++      R E L+    ++   +   W  
Sbjct: 116 NDIAWSPDSERIL---TGLGDDRAAIWDA---ARGERLLTLEGHSDMITSVAWSP 164



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 80/242 (33%), Gaps = 22/242 (9%)

Query: 161 DIYQSITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+ Q++T  + D N       SE +++G+  +   + D               ++    +
Sbjct: 103 DVVQALTAGEDDVNDIAWSPDSERILTGLGDDRAAIWDAARGERLLTLEGHSDMITSVAW 162

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN Q+    + D     R++   T             + +    ++  G R +++   D
Sbjct: 163 SPNGQRALTGSQD--GTARIWDAATGEVIH----TYTGNWVRDVVWTQGGPR-VVTGSAD 215

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            A  ++ V + S     L +   +  S ++SPD ++ V     +G  +++          
Sbjct: 216 GAAHVWDV-ITSGELVTLRDDAAMVRSYAWSPDGTK-VLAGFDDGVVRVW--DEVSGKVV 271

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                      D  WSP G  I      G    + +      +   L          + P
Sbjct: 272 LSLAGHRFGVTDAQWSPDGTRILTGSEDGT---VRLWDATTGEMTGLFL-------CFLP 321

Query: 400 SG 401
            G
Sbjct: 322 DG 323



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 52/303 (17%), Positives = 101/303 (33%), Gaps = 55/303 (18%)

Query: 58  IDELGGKVSEVVSK-D---LQRSDVFNL------ISQDSFKQKITNPDSIPRFQDWNSLG 107
           +D    ++SEVV   D   L  S   +        S     Q +T  +       W S  
Sbjct: 65  VDNGARELSEVVWSPDGTRLATSSYLSPRVLILDASTGDVVQALTAGEDDVNDIAW-SPD 123

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS--------SPASWRKI----- 154
           ++ ++TG     G DR  +    WD    ++++  +  S        SP   R +     
Sbjct: 124 SERILTG----LGDDRAAI----WDAARGERLLTLEGHSDMITSVAWSPNGQRALTGSQD 175

Query: 155 --AHTISDDIYQSITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
             A        + I    G++   +++      VV+G    +  V D   +         
Sbjct: 176 GTARIWDAATGEVIHTYTGNWVRDVVWTQGGPRVVTGSADGAAHVWDVITSGELVTLRDD 235

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             ++    +SP+  KV        D   V + D    +    +   R  +   ++S +G 
Sbjct: 236 AAMVRSYAWSPDGTKV----LAGFDDGVVRVWDEVSGKVVLSLAGHRFGVTDAQWSPDGT 291

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----SDREGKE 326
           R L +  +D  + ++  D  +     L           + PD    + +    S R G  
Sbjct: 292 RIL-TGSEDGTVRLW--DATTGEMTGL--------FLCFLPDGGVAILDAPSLSLRSGPG 340

Query: 327 QLY 329
           +++
Sbjct: 341 EVW 343


>gi|94972140|ref|YP_594180.1| WD-40 repeat-containing protein [Deinococcus geothermalis DSM
           11300]
 gi|94554191|gb|ABF44106.1| WD-40 repeat protein [Deinococcus geothermalis DSM 11300]
          Length = 335

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 80/226 (35%), Gaps = 14/226 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP- 250
            + + D     +R         +    FSP+  ++A  + D+  +          D    
Sbjct: 109 RVRLWDVTTGQLRRTLELGTYYVTAVAFSPDGTRLATGSGDNSAVSSSANSVKLWDVPTG 168

Query: 251 KRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINIS 306
           + +G+ R     +    FS +G+    S  +D+   ++  D+ +    R LT    +  +
Sbjct: 169 RLLGSLRGHTDVVTGVAFSPDGRLLA-SASRDQTARLW--DVATRLPTRTLTGHTDVVSA 225

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPD + +   S       + V            +   A      +SP G  +A +  
Sbjct: 226 LAFSPDGTLLATVS---WDASVKVWTVPEGRLLHTLRGHTAPVETVAFSPDGRTLA-SGG 281

Query: 367 SGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
              +  +  M   G   R L      + +  +SP+G+ L  S  +D
Sbjct: 282 QDREVRLWEM-ATGRLARTLSGHTDTVNSLAFSPNGQWLASSGSRD 326



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 86/242 (35%), Gaps = 29/242 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A A  D     RV L D    +  + +      + A  FS +G R   +  
Sbjct: 93  AFSPDGGLLATAGSDG----RVRLWDVTTGQLRRTLELGTYYVTAVAFSPDGTRLA-TGS 147

Query: 278 KD--------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            D         ++ ++ V         L     +    ++SPD   +   S R+   +L+
Sbjct: 148 GDNSAVSSSANSVKLWDVP-TGRLLGSLRGHTDVVTGVAFSPDGRLLASAS-RDQTARLW 205

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                     R             +SP G L+A   +      +  + +      L    
Sbjct: 206 --DVATRLPTRTLTGHTDVVSALAFSPDGTLLATVSWDASV-KVWTVPEGRLLHTLRGHT 262

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-------DLNGRNETLINTPAYASDPQW 442
           + ++   +SP GR+L        D   +L+ +        L+G  +T +N+ A++ + QW
Sbjct: 263 APVETVAFSPDGRTLA---SGGQDREVRLWEMATGRLARTLSGHTDT-VNSLAFSPNGQW 318

Query: 443 VG 444
           + 
Sbjct: 319 LA 320



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 21/229 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G+    +            F P+ + +A       D     L     +R  +R+      
Sbjct: 35  GSAPVRILQLSGPYAGALAFRPDGRLLA-----SGDGRGTLLWQLPGERLIRRLTE-PGT 88

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVF 318
           + A  FS +G     +   D  + ++  D+ +    R L    +   + ++SPD +++  
Sbjct: 89  VNAVAFSPDGGLLATAGS-DGRVRLW--DVTTGQLRRTLELGTYYVTAVAFSPDGTRLAT 145

Query: 319 ESD-----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            S            + +            +          +SP G L+A           
Sbjct: 146 GSGDNSAVSSSANSVKLWDVPTGRLLGSLRGHTDVVTGVAFSPDGRLLASASRDQTARLW 205

Query: 374 GVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            V        R L   +++ +   +SP G  L        D   K++++
Sbjct: 206 DV--ATRLPTRTLTGHTDVVSALAFSPDGTLLATVSW---DASVKVWTV 249



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 82/255 (32%), Gaps = 32/255 (12%)

Query: 127 EFRLWDVKDRK---QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
             RLWDV   +    +    ++ +  ++      ++     +        + ++  V   
Sbjct: 109 RVRLWDVTTGQLRRTLELGTYYVTAVAFSPDGTRLATGSGDNSAVSSSANSVKLWDVPTG 168

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            + G ++                      ++    FSP+ + +A A+ D        L D
Sbjct: 169 RLLGSLR------------------GHTDVVTGVAFSPDGRLLASASRDQ----TARLWD 206

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  + +     ++ A  FS +G     +V  D ++ +++V  +      L      
Sbjct: 207 VATRLPTRTLTGHTDVVSALAFSPDGTLLA-TVSWDASVKVWTVP-EGRLLHTLRGHTAP 264

Query: 304 NISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             + ++SPD   +       G+++ + + +       R       +     +SP G  +A
Sbjct: 265 VETVAFSPDGRTLA----SGGQDREVRLWEMATGRLARTLSGHTDTVNSLAFSPNGQWLA 320

Query: 363 FTKFSGEKFAIGVMK 377
            +        +   +
Sbjct: 321 SSGSRDRSVRLWAWR 335



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 58/189 (30%), Gaps = 18/189 (9%)

Query: 241 LMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           L    +  AP RI         A  F  +G+        D    +           RLT 
Sbjct: 29  LPTATVGSAPVRILQLSGPYAGALAFRPDGRLLA---SGDGRGTLLWQLPGERLIRRLTE 85

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              +N  A +SPD   +   +  +G+ +L+         +R  +          +SP G 
Sbjct: 86  PGTVNAVA-FSPDGGLLA-TAGSDGRVRLW--DVTTGQLRRTLELGTYYVTAVAFSPDGT 141

Query: 360 LIAFTKFS-------GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +A                 +  +        L      +    +SP GR L  + +   
Sbjct: 142 RLATGSGDNSAVSSSANSVKLWDVPTGRLLGSLRGHTDVVTGVAFSPDGRLLASASR--- 198

Query: 413 DTGSKLYSI 421
           D  ++L+ +
Sbjct: 199 DQTARLWDV 207



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 30/96 (31%), Gaps = 6/96 (6%)

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           GS   RI Q          + P G L+A       +  +          R L E   + A
Sbjct: 35  GSAPVRILQLSGPYAGALAFRPDGRLLA---SGDGRGTLLWQLPGERLIRRLTEPGTVNA 91

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             +SP G  L        D   +L+ +       TL
Sbjct: 92  VAFSPDGGLLA---TAGSDGRVRLWDVTTGQLRRTL 124


>gi|257056568|ref|YP_003134400.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase
           [Saccharomonospora viridis DSM 43017]
 gi|256586440|gb|ACU97573.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase
           [Saccharomonospora viridis DSM 43017]
          Length = 648

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 80/244 (32%), Gaps = 30/244 (12%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R    +  +    P  SP+ + VA+         ++++M T       R+ +      AP
Sbjct: 39  RTSAWTHGERDTAPAISPDGRWVAFLRATGTHAPQLHVMPT-SGGEALRLTDLPLGAGAP 97

Query: 264 RFSSNGKRALISVQKDE--------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            ++ +  R   + +  E          D   +   S    R+T   +      +  D  +
Sbjct: 98  VWAPDSARIAFTARVPEPGRYGTATGPDGEKLGADSEPPRRITRRDYRLDDEGFVRDRPR 157

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            +F  D      +  +  +    + +      D  AS  DPVW+P G  +          
Sbjct: 158 RLFVID------VKPVLEDDESTRPVKPTPLTDATASVADPVWTPDGTGVIVVAPRDWDR 211

Query: 372 A------IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDG----DTGSKLYS 420
                  + ++   G + RLLV        P  S  G    +S   +G       + L++
Sbjct: 212 HESLHKDLYLVPVGGGEPRLLVRCPGAAAHPAVSDDGTVFFYSAAFEGWAPVARNTGLWA 271

Query: 421 IDLN 424
             L+
Sbjct: 272 ATLD 275



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 73/217 (33%), Gaps = 25/217 (11%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLF 302
            RID              AP  S +G+           A  ++ +        RLT+   
Sbjct: 33  LRIDPGRTSAWTHGERDTAPAISPDGRWVAFLRATGTHAPQLHVMPTSGGEALRLTDLPL 92

Query: 303 INISASYSPDSSQIVFES-----DREGK---EQLYVMQSNGSDQKRISQDKEASYFDPVW 354
              +  ++PDS++I F +      R G         + ++    +RI++       +   
Sbjct: 93  GAGAPVWAPDSARIAFTARVPEPGRYGTATGPDGEKLGADSEPPRRITRRDYRLDDEGFV 152

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGS----QERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
             +   +             V++ D S    +   L +  +++  P W+P G  +I    
Sbjct: 153 RDRPRRLFVIDVKP------VLEDDESTRPVKPTPLTDATASVADPVWTPDGTGVIVVAP 206

Query: 410 KDGDT----GSKLYSIDLNGRNETLINT-PAYASDPQ 441
           +D D        LY + + G    L+   P  A+ P 
Sbjct: 207 RDWDRHESLHKDLYLVPVGGGEPRLLVRCPGAAAHPA 243



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 28/77 (36%), Gaps = 2/77 (2%)

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             +   +++ D  +           AP  SP GR + F R   G    +L+ +  +G   
Sbjct: 26  NSYRSSLLRIDPGRTSAWTHGERDTAPAISPDGRWVAFLRAT-GTHAPQLHVMPTSGGEA 84

Query: 429 -TLINTPAYASDPQWVG 444
             L + P  A  P W  
Sbjct: 85  LRLTDLPLGAGAPVWAP 101



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 42/154 (27%), Gaps = 52/154 (33%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSN-LQAPTWSPS 400
                    P  SP G  +AF + +G     + VM   G +   L +      AP W+P 
Sbjct: 43  WTHGERDTAPAISPDGRWVAFLRATGTHAPQLHVMPTSGGEALRLTDLPLGAGAPVWAPD 102

Query: 401 GRSLIFSRKKD---------GDTGSKL--------------YSIDLNG------------ 425
              + F+ +           G  G KL              Y +D  G            
Sbjct: 103 SARIAFTARVPEPGRYGTATGPDGEKLGADSEPPRRITRRDYRLDDEGFVRDRPRRLFVI 162

Query: 426 ---------------RNETLINTPAYASDPQWVG 444
                          +   L +  A  +DP W  
Sbjct: 163 DVKPVLEDDESTRPVKPTPLTDATASVADPVWTP 196


>gi|94971418|ref|YP_593466.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553468|gb|ABF43392.1| serine/threonine protein kinase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 891

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/313 (16%), Positives = 106/313 (33%), Gaps = 23/313 (7%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           D    +        + P++  K A  I+     +       + +  + ++ +V + + K 
Sbjct: 289 DTDSSRAKAAGVLVAEPSAATKPASPIAAKSVSAGKPFPWLWIAASILLALAVGAVVGK- 347

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +       A + +    R   +   RF+P+ Q + Y+     +   V     R      
Sbjct: 348 RVWGSAAPSAPLYHELTFRRGDVRSARFAPDGQTLLYSAAWQGNP--VETFSAREGMVES 405

Query: 252 RIGNFRSMILAPRFSSNGKRALI-----SVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           R        L    SS G+ AL      +        +    L       +      ++ 
Sbjct: 406 RSLGLAKAELM-AISSKGEMALSLNSHPTGTWTRVGTLARAPLAGGTPRPILE----DVE 460

Query: 307 -ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT- 364
            A +SPD   +    +  G ++L          K + +        P  SP+GD IAF  
Sbjct: 461 WADWSPDGENLAVVRNVGGHDRL-----EYPIGKVLYETSGGWISYPRVSPKGDYIAFMD 515

Query: 365 --KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                 +   I V+   G+++ L  E    +   W+P G+ + F+  + G     +  +D
Sbjct: 516 HPTQGDDGGTIAVVDMSGTKKVLTREWYGTEGLAWTPDGKEIWFTASELG-LFHYISGVD 574

Query: 423 LNGRNETLINTPA 435
           L+G+   +   P 
Sbjct: 575 LSGKLRLISRVPG 587



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 72/219 (32%), Gaps = 14/219 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRALI 274
           S + + + +        ++             R  +           +   S + ++  +
Sbjct: 636 SLDGKTLLFDEEGIGGGVQYGGSQDMTYAVYTRGTDGSPALRLGDGSSLSLSPD-QKWAM 694

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQS 333
                    +  +      ++ +TN    +  A + PD  + +F  +  GK  +LY+   
Sbjct: 695 VQTPAAPQQLRLLPTGPGESQTITNDSINHQYARWVPDGKRFIFTGNEPGKGVRLYIQTL 754

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             +    IS +          S  G   A      + +   +    G   RL+       
Sbjct: 755 GTTQPTPISPEGL-DAQSFAISSDGQWAAGVAHDDKTY---LYPTGGGDARLVTGVEPGD 810

Query: 394 AP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            P  +S  GRSL   RK   +  +K+Y ++L    +T++
Sbjct: 811 VPINFSADGRSLYVFRKD--EVPAKVYRVELATGKKTVL 847



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 86/301 (28%), Gaps = 67/301 (22%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + L  +    +  PR SP    +A+  +  +      +    +    K +          
Sbjct: 489 KVLYETSGGWISYPRVSPKGDYIAFMDHPTQGDDGGTIAVVDMSGTKKVLTREWYGTEGL 548

Query: 264 RFSSNGKRALISVQKDEAMDIYS-VDLQS--------------------------NATER 296
            ++ +GK    +  +       S VDL                             +  R
Sbjct: 549 AWTPDGKEIWFTASELGLFHYISGVDLSGKLRLISRVPGSLLIFDIWRDGRVLIARSERR 608

Query: 297 -----LTNTLFINISASY---------SPDSSQIVF-----------ESDREGKEQLYVM 331
                L+       + S+         S D   ++F              ++    +Y  
Sbjct: 609 REVMGLSAGATKERNLSWLDYSYPTDLSLDGKTLLFDEEGIGGGVQYGGSQDMTYAVYTR 668

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS- 390
            ++GS   R+             SP     A  +       + ++     + + +  DS 
Sbjct: 669 GTDGSPALRL-----GDGSSLSLSPDQKW-AMVQTPAAPQQLRLLPTGPGESQTITNDSI 722

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-------YASDPQWV 443
           N Q   W P G+  IF+  + G  G +LY   L     T I+           +SD QW 
Sbjct: 723 NHQYARWVPDGKRFIFTGNEPGK-GVRLYIQTLGTTQPTPISPEGLDAQSFAISSDGQWA 781

Query: 444 G 444
            
Sbjct: 782 A 782



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 52/170 (30%), Gaps = 10/170 (5%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G        +        R+ P+ ++  +   +    +R+Y+      + P  I      
Sbjct: 710 GPGESQTITNDSINHQYARWVPDGKRFIFTGNEPGKGVRLYIQTLGTTQ-PTPISPEGLD 768

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VF 318
             +   SS+G+ A      D     Y           +T     ++  ++S D   + VF
Sbjct: 769 AQSFAISSDGQWAAGVAHDD---KTYLYPTGGGDARLVTGVEPGDVPINFSADGRSLYVF 825

Query: 319 ESDREGKEQLYVMQSNG-----SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             D    +   V  + G      +   I     +     + +P G   A+
Sbjct: 826 RKDEVPAKVYRVELATGKKTVLKEIAPIDPTGVSMIGPILITPDGKNYAY 875


>gi|28197958|ref|NP_778272.1| dipeptidyl-peptidase [Xylella fastidiosa Temecula1]
 gi|182680585|ref|YP_001828745.1| peptidase S9 prolyl oligopeptidase [Xylella fastidiosa M23]
 gi|28056018|gb|AAO27921.1| dipeptidyl-peptidase [Xylella fastidiosa Temecula1]
 gi|182630695|gb|ACB91471.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Xylella fastidiosa M23]
 gi|307579037|gb|ADN63006.1| peptidase S9 prolyl oligopeptidase [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 795

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 99/306 (32%), Gaps = 40/306 (13%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD- 197
           ++ K          KI H +++  Y+     +          +    +    ++L ++D 
Sbjct: 246 LVTKAKNIDEGQIGKIPHYVTESGYEEFQDVR----------TRVGRNMPAPHTLWLIDL 295

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNF 256
           +DG   +    S   I  +P                  + +    D      P RI  N 
Sbjct: 296 KDGTARQLSFSSLPGINEDP---------------LAALRKANRKDPFKGERPVRIETNA 340

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-----RLTNTLFINISAS--- 308
            S + A  ++ +G+   + ++  +  D +   +           RL +  +IN   +   
Sbjct: 341 ESNVPAIHWTQDGRNVAVDIRSIDNKDRWIAAVDLKQATLNVRHRLHDGAWINWDFNDFG 400

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS- 367
           + PD+  +   S+  G   LY ++  G+ ++R           P  S  G  + F     
Sbjct: 401 WLPDNRTLWLLSEESGYSHLYTIEETGTPKQR--TFGHWEVSAPRLSADGSSVYFVCNPT 458

Query: 368 -GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               + +  +  D      L     ++    SP GR ++           +L  I  NG 
Sbjct: 459 WPGGYEVCKLDLDSGYFDTLTALQGVEDFDLSPDGRQIL-VLYSGSYLPPQLAVISTNGG 517

Query: 427 NETLIN 432
              ++ 
Sbjct: 518 QARVLT 523



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 72/201 (35%), Gaps = 12/201 (5%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPK-RIGNF 256
           G     +  + +  +    ++ + + VA    + D++D     +   +     + R+ + 
Sbjct: 330 GERPVRIETNAESNVPAIHWTQDGRNVAVDIRSIDNKDRWIAAVDLKQATLNVRHRLHDG 389

Query: 257 RSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             +        +  + +   +  ++     +Y+++ ++   ++ T   +   +   S D 
Sbjct: 390 AWINWDFNDFGWLPDNRTLWLLSEESGYSHLYTIE-ETGTPKQRTFGHWEVSAPRLSADG 448

Query: 314 SQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-AFTKFSGEK 370
           S + F  +    G  ++  +  +      ++  +    FD   SP G  I      S   
Sbjct: 449 SSVYFVCNPTWPGGYEVCKLDLDSGYFDTLTALQGVEDFD--LSPDGRQILVLYSGSYLP 506

Query: 371 FAIGVMKKDGSQERLLVEDSN 391
             + V+  +G Q R+L +   
Sbjct: 507 PQLAVISTNGGQARVLTDTRT 527



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 10/159 (6%)

Query: 202 NIRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           N+R+       I ++     + P+ + +   + +       +L        PK+      
Sbjct: 381 NVRHRLHDGAWINWDFNDFGWLPDNRTLWLLSEESG---YSHLYTIEETGTPKQRTFGHW 437

Query: 259 MILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            + APR S++G               ++  +DL S   + LT    +      SPD  QI
Sbjct: 438 EVSAPRLSADGSSVYFVCNPTWPGGYEVCKLDLDSGYFDTLTALQGVEDF-DLSPDGRQI 496

Query: 317 -VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            V  S      QL V+ +NG   + ++  + +++    W
Sbjct: 497 LVLYSGSYLPPQLAVISTNGGQARVLTDTRTSTFKAKQW 535



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 49/157 (31%), Gaps = 9/157 (5%)

Query: 288 DLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-----RI 341
             +     R+ TN      +  ++ D   +  +      +  ++   +          R+
Sbjct: 327 PFKGERPVRIETNAESNVPAIHWTQDGRNVAVDIRSIDNKDRWIAAVDLKQATLNVRHRL 386

Query: 342 SQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                    + D  W P    +           +  +++ G+ ++       + AP  S 
Sbjct: 387 HDGAWINWDFNDFGWLPDNRTLWLLSEESGYSHLYTIEETGTPKQRTFGHWEVSAPRLSA 446

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPA 435
            G S+ F        G ++  +DL+ G  +TL     
Sbjct: 447 DGSSVYFVCNPTWPGGYEVCKLDLDSGYFDTLTALQG 483


>gi|307324780|ref|ZP_07603986.1| transcriptional regulator, XRE family [Streptomyces violaceusniger
           Tu 4113]
 gi|306889662|gb|EFN20642.1| transcriptional regulator, XRE family [Streptomyces violaceusniger
           Tu 4113]
          Length = 1184

 Score = 78.9 bits (193), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 53/332 (15%), Positives = 105/332 (31%), Gaps = 38/332 (11%)

Query: 101 QDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD 160
           + W +     + TG++     DR                +   +       R +A     
Sbjct: 685 KAWTAT--DHVETGQLAFSPDDRT---------------LAVGYSDGRVRLRDVATGA-- 725

Query: 161 DIYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
              Q+         + I +  +      G   + + V D      R +  +    L    
Sbjct: 726 --IQTTLPVSASRTTAIAYSPDGSLLSVGGADSVIRVRDLSNGATRSIKFTSPGALTSMA 783

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSPN   +A  +    D+  V L DT    +  R  + +  I A +FS +G+    +   
Sbjct: 784 FSPNGNLLAVGS----DLGEVQLSDTETGASRARFTDHKGPIRAVKFSPDGRLLA-TGSD 838

Query: 279 DEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D    +Y  D+ +  +  + T       S S++PD + +   S     ++   +      
Sbjct: 839 DNTARLY--DVTTGESRAVFTGHTEGVASLSFNPDGTVLATGS----SDRTVRLWDTSRG 892

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             R+++  E +    V++  G  +     +G       + +     R +V      + + 
Sbjct: 893 AARVTEKTENTATSMVFTTDGRALETGDAAGRISTWDTVSRQTHSTRTVVFGGLTTSVSL 952

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            P G  +      DG T       D  G    
Sbjct: 953 PPDGHVIATVTSDDGRTAQVW---DTTGHIHR 981



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 66/210 (31%), Gaps = 18/210 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R       + +    FSP+ + VA A+ D      +   D     A   + +    +  
Sbjct: 602 LRNRLTGHARPVEAVAFSPDGRTVAAASSDG----TIQRWDAGTGAARTPLRSPAGGVKT 657

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESD 321
             +S  G+    S   D +  +   +L +      T T  +     ++SPD   +     
Sbjct: 658 ITYSVAGQLLAAS---DTSKTLRVSNLVTGKA--WTATDHVETGQLAFSPDDRTLA-VGY 711

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +G+ +L          +       +      +SP G L+      G    I V      
Sbjct: 712 SDGRVRLR--DVATGAIQTTLPVSASRTTAIAYSPDGSLL---SVGGADSVIRVRDLSNG 766

Query: 382 QERLL--VEDSNLQAPTWSPSGRSLIFSRK 409
             R +       L +  +SP+G  L     
Sbjct: 767 ATRSIKFTSPGALTSMAFSPNGNLLAVGSD 796



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 96/315 (30%), Gaps = 43/315 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G V+  G     V  RLWD       + +K  ++  S                      F
Sbjct: 872  GTVLATGSSDRTV--RLWDTSRGAARVTEKTENTATSM--------------------VF 909

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             +    +     +G I     V  +  +    +       +  P   P+   +A  T DD
Sbjct: 910  TTDGRALETGDAAGRISTWDTVSRQTHSTRTVVFGGLTTSVSLP---PDGHVIATVTSDD 966

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                +V+     I R      +     +    S +G+        D    +   D+ +  
Sbjct: 967  GRTAQVWDTTGHIHRTTVHGPSRSVAFVTTALSPDGRVLA---TGDTGATVRLWDVTTGK 1023

Query: 294  TE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +   LT    +  + ++S D   +   +D  G  +L+ + + G  +  ++     +    
Sbjct: 1024 SRTVLTGHTDVVAALAFSGDGHTLA-SADASGTIRLWDV-ATGRSRAALTD----NATSV 1077

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKK 410
              S  G  +A     G    + +        R  +      + +   SP   +L    + 
Sbjct: 1078 ALSFDGRTLAVGHDDGT---VRLWDVSTLTVRSTLRGRQLPVSSVVMSPDQHTLAAGSE- 1133

Query: 411  DGDTGSKLYSIDLNG 425
              D   +L+ + + G
Sbjct: 1134 --DGTIQLWKLTVPG 1146


>gi|212538615|ref|XP_002149463.1| NACHT and WD40 domain protein [Penicillium marneffei ATCC 18224]
 gi|210069205|gb|EEA23296.1| NACHT and WD40 domain protein [Penicillium marneffei ATCC 18224]
          Length = 1131

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 93/268 (34%), Gaps = 23/268 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++VVSG +  ++ + D    +           +    FS + Q VA  ++D      + L
Sbjct: 630 QTVVSGSVDRTIKLWDTKTGSELQTLKGHSASVTSVAFSSDGQTVASGSWDS----TIKL 685

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            DT+     + +    + + +  FSSNG+    S   D  + ++      +  + L    
Sbjct: 686 WDTKAGSELQILKGHSAWVSSVAFSSNGQTVA-SGSNDGTIKLWDT-RTGSKLQTLKAHS 743

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +  S ++S D   +   S       +    +    + +  +   AS      S  G ++
Sbjct: 744 ALVTSVAFSSDGQAVASGS---WDRTIKFWDTKTGSELQTLKGHSASVTSVACSSDGQIV 800

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLY 419
           A          I +       E   ++       +  +S  G+++        D   KL+
Sbjct: 801 ASGSQDCT---IKLWDTKTGSELQTLKGHLASLTSVAFSSDGQTV---TSGSVDCTIKLW 854

Query: 420 SIDLNGRNETL------INTPAYASDPQ 441
                   +TL      + + A++SD Q
Sbjct: 855 DTKTGSELQTLKGHSDPVTSVAFSSDGQ 882



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 92/287 (32%), Gaps = 39/287 (13%)

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
               +    +LWD K   ++   K            H  SD +        G         
Sbjct: 844  SGSVDCTIKLWDTKTGSELQTLK-----------GH--SDPVTSVAFSSDG--------- 881

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             ++V SG    ++ + D    +   +       +    FS + Q VA  ++D      + 
Sbjct: 882  -QTVASGSNDCTIKLWDTKTGSELQILNGHSDSVSSVTFSSDGQTVASGSWDG----TIK 936

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            L DTR     + +    + + +  FSS+G+    S   D  + ++      +  + L   
Sbjct: 937  LWDTRTSSELQTLKAHSAWVSSVAFSSDGQTVA-SGSNDGTIKLWDT-RTGSKLQTLKAH 994

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++S D   +V  S       +    +    + ++ +   AS     +S  G +
Sbjct: 995  SDPVTSVAFSSDGQTVVSGS---WDRTIKFWDTKTGSELQMLKGHSASVISVAFSSDGQI 1051

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            +A    SG +  I     D               P  S +   + F+
Sbjct: 1052 VA----SGSRDRIQTFSSDRHDH---DSTPYNSNPQVSVANSWVSFA 1091



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/341 (14%), Positives = 109/341 (31%), Gaps = 46/341 (13%)

Query: 113  TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
               V      ++          +LWD K   ++  +      AS   +A   S D     
Sbjct: 788  VTSVACSSDGQIVASGSQDCTIKLWDTKTGSEL--QTLKGHLASLTSVA--FSSD----- 838

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                           ++V SG +  ++ + D    +           +    FS + Q V
Sbjct: 839  --------------GQTVTSGSVDCTIKLWDTKTGSELQTLKGHSDPVTSVAFSSDGQTV 884

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            A  + D      + L DT+     + +      + +  FSS+G+    S   D  + ++ 
Sbjct: 885  ASGSND----CTIKLWDTKTGSELQILNGHSDSVSSVTFSSDGQTVA-SGSWDGTIKLWD 939

Query: 287  VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                S+  + L        S ++S D   +   S+      + +  +    + +  +   
Sbjct: 940  T-RTSSELQTLKAHSAWVSSVAFSSDGQTVASGSN---DGTIKLWDTRTGSKLQTLKAHS 995

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
                   +S  G  +    +           K GS+ ++L    +++ +  +S  G+ + 
Sbjct: 996  DPVTSVAFSSDGQTVVSGSWDRTIK--FWDTKTGSELQMLKGHSASVISVAFSSDGQIVA 1053

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQWVGF 445
                       + +S D +  + T  N+    S    WV F
Sbjct: 1054 ----SGSRDRIQTFSSDRHDHDSTPYNSNPQVSVANSWVSF 1090



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 73/192 (38%), Gaps = 14/192 (7%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           FSP Q  +   +     + I  +  ++       + +    + +++  FSS+G+  ++S 
Sbjct: 577 FSPMQSTIRKMFFDSSPKQISILPQVEDYWSPGLQTLEGHSASVMSVAFSSDGQT-VVSG 635

Query: 277 QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             D  + ++  D ++ +  + L        S ++S D   +   S       + +  +  
Sbjct: 636 SVDRTIKLW--DTKTGSELQTLKGHSASVTSVAFSSDGQTVASGS---WDSTIKLWDTKA 690

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLL-VEDSNLQ 393
             + +I +   A      +S  G  +A     G    I +     GS+ + L    + + 
Sbjct: 691 GSELQILKGHSAWVSSVAFSSNGQTVASGSNDGT---IKLWDTRTGSKLQTLKAHSALVT 747

Query: 394 APTWSPSGRSLI 405
           +  +S  G+++ 
Sbjct: 748 SVAFSSDGQAVA 759



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 79/245 (32%), Gaps = 23/245 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    FS + Q V   + D      + L DT+     + +    + + +  
Sbjct: 611 QTLEGHSASVMSVAFSSDGQTVVSGSVDR----TIKLWDTKTGSELQTLKGHSASVTSVA 666

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FSS+G+    S   D  + ++      +  + L        S ++S +   +   S+   
Sbjct: 667 FSSDGQTVA-SGSWDSTIKLWDT-KAGSELQILKGHSAWVSSVAFSSNGQTVASGSN--- 721

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +  +    + +  +   A      +S  G  +A   +      I         E 
Sbjct: 722 DGTIKLWDTRTGSKLQTLKAHSALVTSVAFSSDGQAVASGSWDRT---IKFWDTKTGSEL 778

Query: 385 LLVEDSNLQAPTW--SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAY 436
             ++  +    +   S  G+ +    +   D   KL+        +TL      + + A+
Sbjct: 779 QTLKGHSASVTSVACSSDGQIVASGSQ---DCTIKLWDTKTGSELQTLKGHLASLTSVAF 835

Query: 437 ASDPQ 441
           +SD Q
Sbjct: 836 SSDGQ 840


>gi|116621101|ref|YP_823257.1| hypothetical protein Acid_1982 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224263|gb|ABJ82972.1| hypothetical protein Acid_1982 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 407

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 88/284 (30%), Gaps = 66/284 (23%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-------FSSNGKR 271
           +SP+ ++      D   + ++Y+ +           + R    AP        +  +GK 
Sbjct: 64  WSPDGKQYVVNKKDAAGVYQLYVGNAADTNPVCISCSQRPNSPAPDRHKLQPNWHPSGKW 123

Query: 272 ALISVQKDEAM--------------------DIYSVDLQSNATERLTNTLFIN----ISA 307
             ++ + D                       +IY      +   RL++    N       
Sbjct: 124 IAVAGEWDVLPPLLFSTPDLIEGWVQSGLWVNIYVTRPDGSEWHRLSDFGHGNGDGFTGV 183

Query: 308 SYSPDSSQIVFESDREGK------------EQLYVMQSNG----SDQKRISQDKEASYFD 351
           +++PD +Q V+    +G             +  +   +NG    S+ + I+    +    
Sbjct: 184 AFTPDGTQGVWAQIVDGNISKFLFGRWQLIQADFRQDANGVPGFSNLRDITPAGASWVEP 243

Query: 352 PVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
             ++P G  +  T        +     ++       R L    +   +  T+SP G+ + 
Sbjct: 244 GNFAPDGKSLVMTADIGLTDPQGMDQFILDISTGNVRNLTNSPDVWDEHGTFSPDGKKIF 303

Query: 406 FSRKKDGDTGS----------KLYSIDLNGRNETLI---NTPAY 436
           F                    +   +D +G N   +   N+P Y
Sbjct: 304 FMSSYPFRNNPLAHTVLFLQTEFMLMDSDGSNLQQVTHFNSPGY 347



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 91/289 (31%), Gaps = 73/289 (25%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYAT---------YDDEDILRVYLMDTRI---------DR 248
           +P+ D+   +P + P+ + +A A          +   D++  ++                
Sbjct: 105 SPAPDRHKLQPNWHPSGKWIAVAGEWDVLPPLLFSTPDLIEGWVQSGLWVNIYVTRPDGS 164

Query: 249 APKRIGNFRSMI----LAPRFSSNGKRALISVQKDEAMDIYSV------------DLQS- 291
              R+ +F            F+ +G + + +   D  +  +              D    
Sbjct: 165 EWHRLSDFGHGNGDGFTGVAFTPDGTQGVWAQIVDGNISKFLFGRWQLIQADFRQDANGV 224

Query: 292 ---NATERLTNTLFINISA-SYSPDSSQIVFESD-----REGKEQLYVMQSNGSDQKRIS 342
              +    +T      +   +++PD   +V  +D      +G +Q +++  +  + + ++
Sbjct: 225 PGFSNLRDITPAGASWVEPGNFAPDGKSLVMTADIGLTDPQGMDQ-FILDISTGNVRNLT 283

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFA------------IGVMKKDGSQERLLVEDS 390
              +       +SP G  I F      +                +M  DGS  + +   +
Sbjct: 284 NSPDVWDEHGTFSPDGKKIFFMSSYPFRNNPLAHTVLFLQTEFMLMDSDGSNLQQVTHFN 343

Query: 391 NLQAP--------------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +   P               W P GR +  S         + + I+L+G
Sbjct: 344 SPGYPESNVPLQRTAAAGGVWRPDGRQI--SALNLFFPVYQTWWINLSG 390



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 52/155 (33%), Gaps = 33/155 (21%)

Query: 298 TNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--- 353
           T     +    +SPD  Q V    D  G  QLYV  +  ++   IS  +  +   P    
Sbjct: 53  TAKRAPDGLVVWSPDGKQYVVNKKDAAGVYQLYVGNAADTNPVCISCSQRPNSPAPDRHK 112

Query: 354 ----WSPQGDLIAFTK--------------------FSGEKFAIGVMKKDGSQERLLVED 389
               W P G  IA                        SG    I V + DGS+   L + 
Sbjct: 113 LQPNWHPSGKWIAVAGEWDVLPPLLFSTPDLIEGWVQSGLWVNIYVTRPDGSEWHRLSDF 172

Query: 390 SN-----LQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +          ++P G   ++++  DG+    L+
Sbjct: 173 GHGNGDGFTGVAFTPDGTQGVWAQIVDGNISKFLF 207



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/147 (11%), Positives = 48/147 (32%), Gaps = 26/147 (17%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           ++ R I    +  +        G     ++  ++  ++        ++D    N+R LT 
Sbjct: 228 SNLRDITPAGASWVEPGNFAPDG---KSLVMTADIGLTDPQGMDQFILDISTGNVRNLTN 284

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRV----------YLMDTRIDRAPKRIGNF-- 256
           S D       FSP+ +K+ + +        +          +++        +++ +F  
Sbjct: 285 SPDVWDEHGTFSPDGKKIFFMSSYPFRNNPLAHTVLFLQTEFMLMDSDGSNLQQVTHFNS 344

Query: 257 -----------RSMILAPRFSSNGKRA 272
                      R+      +  +G++ 
Sbjct: 345 PGYPESNVPLQRTAAAGGVWRPDGRQI 371


>gi|307607781|emb|CBI44152.1| putative acylaminoacyl-peptidase fragment [Bacillus
           amyloliquefaciens DSM 7]
          Length = 489

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 30/168 (17%)

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-----REGKEQ-LYVMQSNGSDQ 338
             + L++   ++LT+    +  A++SPD  Q+ F ++       GK + +Y+M     D 
Sbjct: 1   MLIHLETGEIQQLTDHEADHFDAAFSPDGKQLAFTANLCEPGDAGKPRDVYLMNLADGDL 60

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK---DGSQERL--LVE----- 388
           K+I+     S+   V+SP G  IA      E     ++K    D   ERL  L +     
Sbjct: 61  KQITP-HSGSFGSCVFSPDGSYIALLGHENEFRNATLVKAWLYDVKNERLSCLTDMLDVH 119

Query: 389 -----------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                            P W+  G+       + G TG  +Y I ++G
Sbjct: 120 LSDALIADSLIGGVTPRPVWTNDGQGFYVLGSEQGSTG--IYYISIDG 165



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 69/214 (32%), Gaps = 27/214 (12%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNT 300
               +++ +  +      FS +GK+   +          +  D+Y ++L     +++T  
Sbjct: 7   TGEIQQLTDHEADHFDAAFSPDGKQLAFTANLCEPGDAGKPRDVYLMNLADGDLKQITPH 66

Query: 301 LFINISASYSPDSSQIVFESDREGKEQ-----LYVMQSNGSDQKRISQDKEASYFD---- 351
                S  +SPD S I                 ++          ++   +    D    
Sbjct: 67  SGSFGSCVFSPDGSYIALLGHENEFRNATLVKAWLYDVKNERLSCLTDMLDVHLSDALIA 126

Query: 352 ----------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                     PVW+  G              I  +  DG    + +E+  +    + P  
Sbjct: 127 DSLIGGVTPRPVWTNDGQGFYVLGSEQGSTGIYYISIDGLVYPIRLEEEYVNGFAFHPDQ 186

Query: 402 RSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTP 434
           +S I +     +  S+LYSI L +G  + L N  
Sbjct: 187 KSCI-AVIVKPERPSELYSISLEDGEEKQLTNNN 219



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 73/214 (34%), Gaps = 31/214 (14%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSM 259
                 +   F+  FSP+ +++A+        D      VYLM+   D   K+I      
Sbjct: 11  QQLTDHEADHFDAAFSPDGKQLAFTANLCEPGDAGKPRDVYLMNL-ADGDLKQITPHSGS 69

Query: 260 ILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINIS-------- 306
             +  FS +G    +   ++E  +      +  D+++     LT+ L +++S        
Sbjct: 70  FGSCVFSPDGSYIALLGHENEFRNATLVKAWLYDVKNERLSCLTDMLDVHLSDALIADSL 129

Query: 307 -------ASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQG 358
                    ++ D          +G   +Y +  +G     R+   +E       + P  
Sbjct: 130 IGGVTPRPVWTNDGQGFYVLGSEQGSTGIYYISIDGLVYPIRL---EEEYVNGFAFHPDQ 186

Query: 359 DL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              IA          +  +  +  +E+ L  +++
Sbjct: 187 KSCIAVIVKPERPSELYSISLEDGEEKQLTNNND 220


>gi|220933736|ref|YP_002512635.1| hypothetical protein Tgr7_0551 [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995046|gb|ACL71648.1| conserved hypothetical protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 944

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 54/282 (19%), Positives = 98/282 (34%), Gaps = 56/282 (19%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             +     N+       D I+F P        +           R+ +         +R 
Sbjct: 33  FPVAYVQRNVSTAGNPTDGIMFSP-----GGDLFIMEKASASARRINI--------TQRE 79

Query: 254 GNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSNATERL-----TNTLFINIS 306
              +  +  P  S +G R L ++++   E+ +I+  D+Q++A  R+     T  L  ++ 
Sbjct: 80  TQGQGDVSDPEVSYDGTRLLFAMRRHTGESWNIWEYDIQTDALRRIIPDDETANLGNDVD 139

Query: 307 ASYSPDSSQIVFESDREGKEQ------------------------LYVMQSNGSDQKRIS 342
             Y PD  +IVF SDR+ K +                        L+VM  NG + ++IS
Sbjct: 140 PHYLPDG-RIVFSSDRQEKTRALMQAEEIEPYAYRDEYEREAVIALHVMDQNGQNLRQIS 198

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSG----EKFAIGVMKKDGSQERL----LVEDSNLQA 394
            ++       V       I ++++        F I     DG+   +        ++   
Sbjct: 199 FNQSHDRNPTVLMSG--EIMYSRWDHVANRNHFPIFFTNPDGTNMFVHYGAFSPGNSFLH 256

Query: 395 PTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLINTPA 435
           P   P GR +       G + G  L  ID+   +E     P 
Sbjct: 257 PREMPDGRVMSSLMPLQGTSEGGALVIIDIANYSENNHPAPG 298



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 38/113 (33%), Gaps = 13/113 (11%)

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           Q+ +S     +    ++SP GDL    K S     I +       +R      ++  P  
Sbjct: 39  QRNVSTAGNPTD-GIMFSPGGDLFIMEKASASARRINI------TQRETQGQGDVSDPEV 91

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI------NTPAYASDPQWVG 444
           S  G  L+F+ ++       ++  D+       I             DP ++ 
Sbjct: 92  SYDGTRLLFAMRRHTGESWNIWEYDIQTDALRRIIPDDETANLGNDVDPHYLP 144


>gi|254416276|ref|ZP_05030030.1| protein kinase domain [Microcoleus chthonoplastes PCC 7420]
 gi|196176958|gb|EDX71968.1| protein kinase domain [Microcoleus chthonoplastes PCC 7420]
          Length = 656

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 83/234 (35%), Gaps = 17/234 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +        +    F+P+ Q +A  +YD      + +      +    +   R  I +  
Sbjct: 404 HTLNGHLGRVCAIAFTPDSQYLATGSYDQ----TIKVWQVENGQLILTLTGHRKWISSLA 459

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +G   L S   D  + ++ +  Q    + LT         + SPD   I   S  +G
Sbjct: 460 ISPDG-EILASGSNDGTIKLWHIQ-QGRELQTLTGHTSYINDIAISPDGESIASVSG-DG 516

Query: 325 KEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             +L+ + + G +Q     SQ +   ++   +SP G L+A T  S     +  + +    
Sbjct: 517 TVKLWQIST-GEEQNSFGHSQLRFGFFYSVAFSPDGQLLA-TGKSDGTITLWQVGERREL 574

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             L      ++   +SP+G +L            +LY        +TL     +
Sbjct: 575 GTLRGHTQRVRTLAFSPNGYTLASGSMDKTIKIWQLYD------RQTLATLNGH 622



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 81/233 (34%), Gaps = 23/233 (9%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S+ + +G    ++ V   +   +        + +     SP+ + +A  + D      + 
Sbjct: 422 SQYLATGSYDQTIKVWQVENGQLILTLTGHRKWISSLAISPDGEILASGSNDG----TIK 477

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE----- 295
           L   +  R  + +    S I     S +G+    SV  D  + ++ +   +   +     
Sbjct: 478 LWHIQQGRELQTLTGHTSYINDIAISPDGESIA-SVSGDGTVKLWQI--STGEEQNSFGH 534

Query: 296 -RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-- 352
            +L    F ++  ++SPD   +      +G   L+ +     +++ +   +  +      
Sbjct: 535 SQLRFGFFYSV--AFSPDGQLLA-TGKSDGTITLWQV----GERRELGTLRGHTQRVRTL 587

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +SP G  +A            +  +      L      + A  +SP G +L+
Sbjct: 588 AFSPNGYTLASGSMDKTIKIWQLYDRQT-LATLNGHTWEVYAVAFSPDGETLV 639



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 58/186 (31%), Gaps = 12/186 (6%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +  + +      + A   S +G   L S   D    ++ +  +      L   L  
Sbjct: 355 LTNWQVIQTLDGHWGSVEAVTISPDG-LILASGSADATAMLWQLP-EGQEYHTLNGHLGR 412

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + +++PDS  +   S     + + V Q                      SP G+++A 
Sbjct: 413 VCAIAFTPDSQYLATGSY---DQTIKVWQVENGQLILTLTGHRKWISSLAISPDGEILAS 469

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               G      +    G + + L    S +     SP G S+       GD   KL+ I 
Sbjct: 470 GSNDGTIKLWHIQ--QGRELQTLTGHTSYINDIAISPDGESIA---SVSGDGTVKLWQIS 524

Query: 423 LNGRNE 428
             G  +
Sbjct: 525 -TGEEQ 529



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/273 (12%), Positives = 77/273 (28%), Gaps = 44/273 (16%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
           +Q L TG   +          ++W V++ + I+               H           
Sbjct: 422 SQYLATGSYDQT--------IKVWQVENGQLILTLT-----------GHR---------- 452

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             K   +  I    E + SG    ++ +                  + +   SP+ + +A
Sbjct: 453 --KWISSLAISPDGEILASGSNDGTIKLWHIQQGRELQTLTGHTSYINDIAISPDGESIA 510

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRALISVQKDEAMDI 284
             + D      V L            G+ +       +  FS +G+    + + D  + +
Sbjct: 511 SVSGDG----TVKLWQISTGEEQNSFGHSQLRFGFFYSVAFSPDGQLLA-TGKSDGTITL 565

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + V  +      L        + ++SP+   +   S     + + + Q            
Sbjct: 566 WQV-GERRELGTLRGHTQRVRTLAFSPNGYTLASGSM---DKTIKIWQLYDRQTLATLNG 621

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                +   +SP G+ +       +   +    
Sbjct: 622 HTWEVYAVAFSPDGETLVSGSMD-KTMKVWRCD 653


>gi|197116844|ref|YP_002137271.1| TPR domain-containing protein [Geobacter bemidjiensis Bem]
 gi|197086204|gb|ACH37475.1| TPR domain protein [Geobacter bemidjiensis Bem]
          Length = 2741

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 93/235 (39%), Gaps = 13/235 (5%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCV-MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
              SR   +  +V  G     L +    +   +  L       +  P F+     +AYA 
Sbjct: 63  AARSRDGKLVATVERGDAGYELWLHAPGNAEALPRLLRQSPMRISAPAFNAAATLLAYAD 122

Query: 231 YDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSV 287
             D+    ++L+D  R+D  P+R+    +   AP FS +G   L   Q   +   +I  +
Sbjct: 123 ERDDLKGDIWLIDLARLDAEPRRVTGNDAGEDAPAFSPDGSALLYQRQLPGSERREIIRL 182

Query: 288 DLQSNATERLTNTLFINIS-ASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDK 345
           +L +   + L   + I+ + A+ SPD  ++ F S +++    L++         +++   
Sbjct: 183 ELAAGGAKAL--PIGIDAAFAAPSPDGEKLAFVSREKDAGGDLWLYDR--GSLTQLTSGP 238

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSP 399
           E   + P W    D I FT+F+          + G+  RL L    +   P   P
Sbjct: 239 ERDLY-PTW-QDSDTILFTRFAPPSGDSATGPEGGAIFRLKLSRKGSDGLPAAFP 291



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 81/200 (40%), Gaps = 17/200 (8%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASY 309
           +   RS++ A R S +GK      + D   +++ +    NA      L  +     + ++
Sbjct: 54  VYTPRSVLYAAR-SRDGKLVATVERGDAGYELW-LHAPGNAEALPRLLRQSPMRISAPAF 111

Query: 310 SPDSSQIVFESDREG-KEQLYVMQSN--GSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +  ++ + +  +R+  K  ++++      ++ +R++   +A    P +SP G  + + + 
Sbjct: 112 NAAATLLAYADERDDLKGDIWLIDLARLDAEPRRVT-GNDAGEDAPAFSPDGSALLYQRQ 170

Query: 367 SGEKFA---IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    I +    G  + L +  D+   AP  SP G  L F   ++ D G  L+  D
Sbjct: 171 LPGSERREIIRLELAAGGAKALPIGIDAAFAAP--SPDGEKLAFVS-REKDAGGDLWLYD 227

Query: 423 LNGRNETLINTPAYASDPQW 442
             G    L + P     P W
Sbjct: 228 R-GSLTQLTSGPERDLYPTW 246


>gi|228471645|ref|ZP_04056419.1| prolyl oligopeptidase family protein [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228277064|gb|EEK15750.1| prolyl oligopeptidase family protein [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 623

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 68/181 (37%), Gaps = 18/181 (9%)

Query: 265 FSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQ 315
           +S +GK+ L   +             DIY  D+ +  T  LT  +   + + S+S +   
Sbjct: 165 WSPDGKKVLYVTKAKVGTQYVVSTNTDIYQYDIATKTTTNLTEGMMGYDTNPSFSKEGVL 224

Query: 316 IVFESDREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                  +G       LY++ +    +  ++   + + F  +WS  G  I F   +    
Sbjct: 225 AWLSMKEDGNEADKNDLYILHN--GQKINLTATWDNTVFSYLWSDDGKKIYFIAATNGTQ 282

Query: 372 AIGVMKK--DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            +  ++        + L +           SG  L+ +R  D +   ++Y+++L GR   
Sbjct: 283 QLFEIEPFAKNPTVKQLTKGIFDINNIIGQSGDLLVVTRN-DMNRAPEIYTVNLKGRKAP 341

Query: 430 L 430
           L
Sbjct: 342 L 342



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 63/180 (35%), Gaps = 15/180 (8%)

Query: 219 FSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +SP+ +KV Y T       Y       +Y  D                   P FS  G  
Sbjct: 165 WSPDGKKVLYVTKAKVGTQYVVSTNTDIYQYDIATKTTTNLTEGMMGYDTNPSFSKEGVL 224

Query: 272 ALISVQKDEA----MDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKE 326
           A +S+++D       D+Y   L +     LT T    + S  +S D  +I F +   G +
Sbjct: 225 AWLSMKEDGNEADKNDLYI--LHNGQKINLTATWDNTVFSYLWSDDGKKIYFIAATNGTQ 282

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERL 385
           QL+ ++    +       K     + +    GDL+  T+        I  +   G +  L
Sbjct: 283 QLFEIEPFAKNPTVKQLTKGIFDINNIIGQSGDLLVVTRNDMNRAPEIYTVNLKGRKAPL 342



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 75/217 (34%), Gaps = 15/217 (6%)

Query: 176 RILFVSESVVSGII----KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           ++L+V+++ V           +   D        LT         P FS     +A+ + 
Sbjct: 171 KVLYVTKAKVGTQYVVSTNTDIYQYDIATKTTTNLTEGMMGYDTNPSFSKEG-VLAWLSM 229

Query: 232 --DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD- 288
             D  +  +  L      +       + + + +  +S +GK+       +    ++ ++ 
Sbjct: 230 KEDGNEADKNDLYILHNGQKINLTATWDNTVFSYLWSDDGKKIYFIAATNGTQQLFEIEP 289

Query: 289 -LQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGS----DQKRIS 342
             ++   ++LT  +F +I+         +V   +D     ++Y +   G     + K++S
Sbjct: 290 FAKNPTVKQLTKGIF-DINNIIGQSGDLLVVTRNDMNRAPEIYTVNLKGRKAPLEVKQLS 348

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
              +  Y +    P  +    T    +  A  +   D
Sbjct: 349 HINDYLYKNIAKCPVKERTIKTTDGKDMLAWVIYPPD 385



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 37/103 (35%), Gaps = 13/103 (12%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFS--GEKF------AIGVMKKDGSQERLLVED--SNL 392
           Q+      D +WSP G  + +   +  G ++       I            L E      
Sbjct: 154 QEPHGGEEDYIWSPDGKKVLYVTKAKVGTQYVVSTNTDIYQYDIATKTTTNLTEGMMGYD 213

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSK--LYSIDLNGRNETLINT 433
             P++S  G     S K+DG+   K  LY +  NG+   L  T
Sbjct: 214 TNPSFSKEGVLAWLSMKEDGNEADKNDLYILH-NGQKINLTAT 255


>gi|315045974|ref|XP_003172362.1| vegetative incompatibility protein HET-E-1 [Arthroderma gypseum CBS
            118893]
 gi|311342748|gb|EFR01951.1| vegetative incompatibility protein HET-E-1 [Arthroderma gypseum CBS
            118893]
          Length = 1533

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/375 (14%), Positives = 119/375 (31%), Gaps = 81/375 (21%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDR---KQIIGKK------FFSSPASWRKIAHTIS 159
             V+    ++  +        ++WD+      K + G +        S  + +  +A   S
Sbjct: 741  SVVLSHDNQYLISASCDRNIKIWDIAKGDCAKTLQGHQDWVNALALSRKSGYHHLASASS 800

Query: 160  DDIYQ--------SITGEKG--DFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLT 207
            D   +         IT  KG  D+ + I F  +S+   SG    ++ + D   ++   + 
Sbjct: 801  DRTIRIWDTKDCRCITVLKGHSDWVNSIAFKQDSLYLASGSSDKTVRIWDVATSSCVKIL 860

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            P     +    FS N + +A ++ D      + + D+   +  + +       +   FS 
Sbjct: 861  PGHSNWVNSVAFSHNGKYLASSSNDA----TIKIWDSG-GKCEQTLRGHSWTAICLTFSP 915

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            + +R  IS   D  + ++ + +   +   L        S ++S D   I   SD +    
Sbjct: 916  DDQRL-ISGSSDRTIKVWDMTVIGKSERVLNAHDKWVDSLTFSHDGKYIASISD-DWTLM 973

Query: 328  LY---------------------------------------VMQSNGSDQKRISQDKEAS 348
            ++                                       +      + K   +  E  
Sbjct: 974  VWSASTGKYMHTLGTHKDMLNGLCFSYDTLLASASSDHTAKIWDIITGECKETLEGHEDC 1033

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIF 406
                 +SP G L+  +        + V + D      L E       T  ++  G+ +  
Sbjct: 1034 VNSVDFSPDGSLLVSSS---GDHTVRVWEVDTGMCIRLFEGHTDSVGTAIFANDGQYIAS 1090

Query: 407  SRKKDGDTGSKLYSI 421
            S +   D   +++S 
Sbjct: 1091 SSR---DKSVRIWST 1102



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 90/243 (37%), Gaps = 19/243 (7%)

Query: 182  ESVVSGIIKNSLCVMDRD--GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            + ++SG    ++ V D    G + R +  + D+ +    FS + + +A  + D      +
Sbjct: 918  QRLISGSSDRTIKVWDMTVIGKSER-VLNAHDKWVDSLTFSHDGKYIASISDD----WTL 972

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLT 298
             +      +    +G  + M+    FS +    L S   D    I+  D+ +    E L 
Sbjct: 973  MVWSASTGKYMHTLGTHKDMLNGLCFSYD--TLLASASSDHTAKIW--DIITGECKETLE 1028

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   S  +SPD S +V  S   G   + V + +     R+ +    S    +++  G
Sbjct: 1029 GHEDCVNSVDFSPDGSLLVSSS---GDHTVRVWEVDTGMCIRLFEGHTDSVGTAIFANDG 1085

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              IA +    +   I   +++     L   D  + +  +S   + +  +     D   +L
Sbjct: 1086 QYIA-SSSRDKSVRIWSTEQENCIWVLNGHDGWVNSVAFSDDSKYVASTST---DRTIRL 1141

Query: 419  YSI 421
            + +
Sbjct: 1142 WHV 1144



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 13/138 (9%)

Query: 158  ISDDIYQSITGEKG--DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
            +   +++  T   G   F +   +++ S        S+ +   +  N  ++    D  + 
Sbjct: 1064 MCIRLFEGHTDSVGTAIFANDGQYIASS----SRDKSVRIWSTEQENCIWVLNGHDGWVN 1119

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               FS + + VA  + D      + L   R       +   +  + A  FS NGK    S
Sbjct: 1120 SVAFSDDSKYVASTSTDR----TIRLWHVRTGVCAHVLHGHKDSVNAVAFSHNGKFLA-S 1174

Query: 276  VQKDEAMDIYSVDLQSNA 293
               DE + I+  D  +  
Sbjct: 1175 TSADETIRIW--DTDTGK 1190


>gi|115385425|ref|XP_001209259.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114187706|gb|EAU29406.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 1641

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 91/256 (35%), Gaps = 19/256 (7%)

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             KG +  ++ +V  ++        L          R +    + ++    FSPN + +A 
Sbjct: 977  RKGFWGEKLPYVK-NISGIKESWDLY---------RQVLSGHNGVVSAVAFSPNGKILAS 1026

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + D +  L      T      + +     M+ A  FS NG + L S   D+ + +++VD
Sbjct: 1027 GSSDTKVCLWAIDAATASGTPTQTLSGHTDMVKAVAFSPNG-QILASASDDQTLRLWTVD 1085

Query: 289  LQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
              +   E    +     +  + ++SPD   +   S  +   +L+ + S        +   
Sbjct: 1086 SATATIEPKQTIGGHTDLVNAVAFSPDGLLLASASS-DKTIRLWYLGSPELTSHMFT-GH 1143

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                     SP G  +A            +     +        + + A  +SP+G  L+
Sbjct: 1144 GGRVNAVTISPDGKQLASASSDKTIALWSLDHPGTANSEFKSLPNEVNAIAFSPNGEMLV 1203

Query: 406  FSRKKDGDTGSKLYSI 421
             S   +G+    L+SI
Sbjct: 1204 -SGSSNGELI--LWSI 1216



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 79/246 (32%), Gaps = 19/246 (7%)

Query: 186  SGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S     ++ +   D          S    +    FSPN + +   + + E IL     + 
Sbjct: 1161 SASSDKTIALWSLDHPGTANSEFKSLPNEVNAIAFSPNGEMLVSGSSNGELILWSIGPEL 1220

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--LQSNATERLTNTLF 302
               RA K + +    I A  FS +G +   S   D  + ++ V+  +      RLT    
Sbjct: 1221 ATTRAVKLLYHSVDSIHAVAFSPDGTKFA-SASSDATVCLWDVNTSISDTCIARLTGHEN 1279

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQG 358
               S ++S D +     S+      + +   + +    +S   E            SP  
Sbjct: 1280 CVRSVAFSSDGNIFASASN---DATVRLWDIDSATNTGVSHCPETCHKGMVTAVALSPDD 1336

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             ++A +  S     +  +         ++ L   S      +SP  + L          G
Sbjct: 1337 RMLA-SASSDATVRLCSIDPTTGTSIFKQSLYLKSWATTVAFSPDSKLLA----TGTTWG 1391

Query: 416  SKLYSI 421
              LY I
Sbjct: 1392 VVLYEI 1397



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 72/204 (35%), Gaps = 40/204 (19%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRI--------DRAPKRIGNFRSMILAPRFSSNGK 270
            +S N + +A A+ D      +YL +               +++   +  +    FS++G 
Sbjct: 1421 WSFNGKMLASASSDQ----IIYLWNISSSAHGLRILGNESQKLIGHKGSVSTAAFSTDGT 1476

Query: 271  RALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQ 327
              L S   D  + ++S+D  + A      L        + ++S D+  +   SD +G  +
Sbjct: 1477 -ILASGSTDTTVRLWSIDASTGAARSRQTLAGHRKSVNALTFSLDNRMLASCSD-DGSVR 1534

Query: 328  LYVMQS--NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            ++ +       +  R+ +  E       +S     I               + DG    L
Sbjct: 1535 IWNIDPITATGECTRLLRV-ELPVRSLTFSGDVRYI---------------RTDGGLLSL 1578

Query: 386  LVED---SNLQAPTWSPSGRSLIF 406
            L  D    + ++P     G  +I+
Sbjct: 1579 LESDMPFGHDRSPYVR--GEWIIW 1600



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/342 (12%), Positives = 94/342 (27%), Gaps = 65/342 (19%)

Query: 145  FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
             ++  + + + H++ D I+       G       F S S  + +    +     D     
Sbjct: 1220 LATTRAVKLLYHSV-DSIHAVAFSPDGTK-----FASASSDATVCLWDVNTSISD--TCI 1271

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                  +  +    FS +    A A+ D    L      T    +       + M+ A  
Sbjct: 1272 ARLTGHENCVRSVAFSSDGNIFASASNDATVRLWDIDSATNTGVSHCPETCHKGMVTAVA 1331

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIV----- 317
             S + +    S   D  + + S+D  +  +  ++         + ++SPDS  +      
Sbjct: 1332 LSPDDRMLA-SASSDATVRLCSIDPTTGTSIFKQSLYLKSWATTVAFSPDSKLLATGTTW 1390

Query: 318  --------------------------------FE----SDREGKEQLYVMQSNG------ 335
                                            F     +     + +Y+   +       
Sbjct: 1391 GVVLYEIVPECAEIVSEDWLDPSDSVNAVVWSFNGKMLASASSDQIIYLWNISSSAHGLR 1450

Query: 336  --SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER----LLVED 389
               ++ +     + S     +S  G ++A +  +     +  +       R    L    
Sbjct: 1451 ILGNESQKLIGHKGSVSTAAFSTDGTILA-SGSTDTTVRLWSIDASTGAARSRQTLAGHR 1509

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             ++ A T+S   R L             +  I   G    L+
Sbjct: 1510 KSVNALTFSLDNRMLASCSDDGSVRIWNIDPITATGECTRLL 1551



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 3/118 (2%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             N           +    FS +   +A  + D    L      T   R+ + +   R  +
Sbjct: 1453 GNESQKLIGHKGSVSTAAFSTDGTILASGSTDTTVRLWSIDASTGAARSRQTLAGHRKSV 1512

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDL--QSNATERLTNTLFINISASYSPDSSQI 316
             A  FS + +    S   D ++ I+++D    +    RL        S ++S D   I
Sbjct: 1513 NALTFSLDNRMLA-SCSDDGSVRIWNIDPITATGECTRLLRVELPVRSLTFSGDVRYI 1569


>gi|332706283|ref|ZP_08426351.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332354988|gb|EGJ34460.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1611

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 82/217 (37%), Gaps = 17/217 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D  G N   L       +    FSP+   +A A+YD  +  R++ +          
Sbjct: 761 IRLWDLQG-NPLALFQGHQDWVRSVSFSPDGYMLATASYD--NTARLWDLQ---GNPLAL 814

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
               +S + +  FS +GK    +  +D+ + ++  DLQ N             S S+SPD
Sbjct: 815 FQGHQSSVNSVSFSPDGKTLA-TASEDKTVKLW--DLQGNPLAVFQGHQSSVNSVSFSPD 871

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +   S+    + + +    G +   + Q  +       +SP G  +A          
Sbjct: 872 GKTLATASE---DKTVKLWDLQG-NPLAVFQGHQDWVRSVSFSPDGKTLATASEDKT--- 924

Query: 373 IGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
           + +    G+Q  L     S + + ++S  G++L  + 
Sbjct: 925 VRLWDLQGNQLALFQGHQSLVTSVSFSRDGKTLATAS 961



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 91/245 (37%), Gaps = 29/245 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L       +    FSP+   +A A+  +     + L D +           +  + +  
Sbjct: 732 RLFRGHQGPVESVSFSPDGHMLATASDGN-----IRLWDLQ-GNPLALFQGHQDWVRSVS 785

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G     +   D    ++  DLQ N             S S+SPD   +   S+   
Sbjct: 786 FSPDGYMLA-TASYDNTARLW--DLQGNPLALFQGHQSSVNSVSFSPDGKTLATASE--- 839

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +    G +   + Q  ++S     +SP G  +A          + +    G+   
Sbjct: 840 DKTVKLWDLQG-NPLAVFQGHQSSVNSVSFSPDGKTLATASEDKT---VKLWDLQGNPLA 895

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-------RNETLINTPAY 436
           +     +  ++ ++SP G++L  + +   D   +L+  DL G        +++L+ + ++
Sbjct: 896 VFQGHQDWVRSVSFSPDGKTLATASE---DKTVRLW--DLQGNQLALFQGHQSLVTSVSF 950

Query: 437 ASDPQ 441
           + D +
Sbjct: 951 SRDGK 955



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 98/251 (39%), Gaps = 23/251 (9%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ +     ++ + D  G N   L      ++    FS + + +A A++   D LRV+ 
Sbjct: 914  KTLATASEDKTVRLWDLQG-NQLALFQGHQSLVTSVSFSRDGKTLATASW---DTLRVWD 969

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +          +   +  +L+  FS +GK    +   D+ + ++  DLQSN         
Sbjct: 970  LQ---GNLLALLKGHQDWVLSVSFSRDGKTLA-TASADKTVRLW--DLQSNQLALFQGHQ 1023

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +  S  +S D   +   S     + + +    G +   + +  ++S     +S  G  +
Sbjct: 1024 GLVTSVRFSRDGKTLATAS---WDKTVRLWDLQG-NPLAVLRGHQSSVTSVRFSRDGKTL 1079

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A          + +    G+   +L    S++ +  +S  G++L  + +   D   +L+ 
Sbjct: 1080 ATASEDKT---VRLWDLQGNPLAVLRGHQSSVTSVRFSRDGKTLATASE---DKTVRLW- 1132

Query: 421  IDLNGRNETLI 431
             DL G    ++
Sbjct: 1133 -DLQGNPLAVL 1142



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 89/269 (33%), Gaps = 38/269 (14%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +L V D  G N+  L       +    FS + + +A A+ D      V L D + ++   
Sbjct: 964  TLRVWDLQG-NLLALLKGHQDWVLSVSFSRDGKTLATASADK----TVRLWDLQSNQLA- 1017

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                 + ++ + RFS +GK    +   D+ + ++  DLQ N    L        S  +S 
Sbjct: 1018 LFQGHQGLVTSVRFSRDGKTLA-TASWDKTVRLW--DLQGNPLAVLRGHQSSVTSVRFSR 1074

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            D   +   S+    + + +    G +   + +  ++S     +S  G  +A         
Sbjct: 1075 DGKTLATASE---DKTVRLWDLQG-NPLAVLRGHQSSVTSVRFSRDGKTLATASEDKT-- 1128

Query: 372  AIGVMKKDGSQERLL--------------------VEDSNLQAPTWSPSGRSLIFSRKKD 411
             + +    G+   +L                       S+     W   G+ L   +   
Sbjct: 1129 -VRLWDLQGNPLAVLRGHQSSVSSVSFSRDGKTLATASSDNTFRVWDLQGKQLALFQGHQ 1187

Query: 412  GDTGS--KLYSIDLNGRNETLINTPAYAS 438
            G  G    L S   NG+    ++      
Sbjct: 1188 GHQGPLTNLVSFSPNGKTLATVSGDNMVR 1216



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 75/237 (31%), Gaps = 32/237 (13%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L      G  +  +          P  SP               L          + 
Sbjct: 686 RELLYSAMETGQELYNIVKDGRPFDNYPAISP---------------LYALQQSLSKFKE 730

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +     +  + +  FS +G     +   D  + ++  DLQ N             S S+
Sbjct: 731 NRLFRGHQGPVESVSFSPDGHMLATAS--DGNIRLW--DLQGNPLALFQGHQDWVRSVSF 786

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   +   S         +    G +   + Q  ++S     +SP G  +A       
Sbjct: 787 SPDGYMLATASY---DNTARLWDLQG-NPLALFQGHQSSVNSVSFSPDGKTLATASEDKT 842

Query: 370 KFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              + +    G+   +     S++ + ++SP G++L  + +   D   KL+  DL G
Sbjct: 843 ---VKLWDLQGNPLAVFQGHQSSVNSVSFSPDGKTLATASE---DKTVKLW--DLQG 891



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 92/251 (36%), Gaps = 33/251 (13%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ +     ++ + D  G N   +       +    FS + + +A A+ D  +  RV+ 
Sbjct: 1118 KTLATASEDKTVRLWDLQG-NPLAVLRGHQSSVSSVSFSRDGKTLATASSD--NTFRVW- 1173

Query: 242  MDTRIDRAPKRIGNFRSMILA-------PRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                 D   K++  F+              FS NGK    +V  D  + ++  DLQ    
Sbjct: 1174 -----DLQGKQLALFQGHQGHQGPLTNLVSFSPNGKTLA-TVSGDNMVRVW--DLQGKQL 1225

Query: 295  ERLTNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                       N+  S+SPD   +   S     + + +    G +Q  + Q  +      
Sbjct: 1226 ALFQGHQGPLTNVVVSFSPDGQMLATAS---WDKTVRLWDLEG-NQLALFQGHQDRVNSV 1281

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKK 410
             +SP G ++A          + +    G+   L    +     + ++SP G++L  + K 
Sbjct: 1282 SFSPNGQMLATASVDKT---VRLWDLQGNPLALFKGHQSLVNNSVSFSPDGKTLATASK- 1337

Query: 411  DGDTGSKLYSI 421
              D   +L+ +
Sbjct: 1338 --DNTVRLWPV 1346



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 116/348 (33%), Gaps = 57/348 (16%)

Query: 129  RLWDVKDRKQII--GKKFFSSPASWRKIAHTISDDIYQ------------SITGEKGDFN 174
            RLWD++  +  +  G +   +  S+ +   T++   +             ++     D+ 
Sbjct: 926  RLWDLQGNQLALFQGHQSLVTSVSFSRDGKTLATASWDTLRVWDLQGNLLALLKGHQDWV 985

Query: 175  SRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
              + F  +            V   D  +N   L      ++   RFS + + +A A++D 
Sbjct: 986  LSVSFSRDGKTLATASADKTVRLWDLQSNQLALFQGHQGLVTSVRFSRDGKTLATASWDK 1045

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L D +       +   +S + + RFS +GK    +  +D+ + ++  DLQ N 
Sbjct: 1046 ----TVRLWDLQ-GNPLAVLRGHQSSVTSVRFSRDGKTLA-TASEDKTVRLW--DLQGNP 1097

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
               L        S  +S D   +   S+    + + +    G +   + +  ++S     
Sbjct: 1098 LAVLRGHQSSVTSVRFSRDGKTLATASE---DKTVRLWDLQG-NPLAVLRGHQSSVSSVS 1153

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE------------------------RLLVED 389
            +S  G  +A T  S   F +      G Q                          L    
Sbjct: 1154 FSRDGKTLA-TASSDNTFRVW--DLQGKQLALFQGHQGHQGPLTNLVSFSPNGKTLATVS 1210

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             +     W   G+ L   +   G   + + S   +G    ++ T ++ 
Sbjct: 1211 GDNMVRVWDLQGKQLALFQGHQGPLTNVVVSFSPDG---QMLATASWD 1255



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 65/193 (33%), Gaps = 31/193 (16%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS------ 181
            FR+WD++ ++  + +           +  + S +  +++    GD   R+  +       
Sbjct: 1170 FRVWDLQGKQLALFQGHQGHQGPLTNLV-SFSPN-GKTLATVSGDNMVRVWDLQGKQLAL 1227

Query: 182  ESVVSGIIKNSLCVMDRDGA------------------NIRYLTPSRDQILFEPRFSPNQ 223
                 G + N +     DG                   N   L       +    FSPN 
Sbjct: 1228 FQGHQGPLTNVVVSFSPDGQMLATASWDKTVRLWDLEGNQLALFQGHQDRVNSVSFSPNG 1287

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            Q +A A+ D      V L D + +      G+   +  +  FS +GK    +  KD  + 
Sbjct: 1288 QMLATASVDK----TVRLWDLQGNPLALFKGHQSLVNNSVSFSPDGKTLA-TASKDNTVR 1342

Query: 284  IYSVDLQSNATER 296
            ++ V+       R
Sbjct: 1343 LWPVEDLGQMLVR 1355


>gi|299139909|ref|ZP_07033080.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
 gi|298598056|gb|EFI54223.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
          Length = 407

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSN 334
           Q+     ++ +       ++LT     + +  YSPD   I   S+RE   +  ++++  N
Sbjct: 20  QETGWDKVFLIPASGGKPKQLTKGESEDETPVYSPDGKSIAIVSNREFAEEHHIWIVPLN 79

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           GS  +R++        DP WSP G  I F +
Sbjct: 80  GSKPRRLTHLA-GVESDPQWSPDGTTIYFQR 109



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 56/113 (49%), Gaps = 5/113 (4%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDG 380
            G ++++++ ++G   K++++  E+    PV+SP G  IA        E+  I ++  +G
Sbjct: 22  TGWDKVFLIPASGGKPKQLTK-GESEDETPVYSPDGKSIAIVSNREFAEEHHIWIVPLNG 80

Query: 381 SQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           S+ R L   + +++ P WSP G ++ F R     +    Y+   NG     +N
Sbjct: 81  SKPRRLTHLAGVESDPQWSPDGTTIYFQRGTALRS-PATYTAATNGGEAHPLN 132



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 4/130 (3%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--E 280
            Q+   + + +    +V+L+       PK++    S    P +S +GK   I   ++  E
Sbjct: 11  GQQDLSSGFQETGWDKVFLIP-ASGGKPKQLTKGESEDETPVYSPDGKSIAIVSNREFAE 69

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQK 339
              I+ V L  +   RLT+   +     +SPD + I F+          Y   +NG +  
Sbjct: 70  EHHIWIVPLNGSKPRRLTHLAGVESDPQWSPDGTTIYFQRGTALRSPATYTAATNGGEAH 129

Query: 340 RISQDKEASY 349
            ++    + Y
Sbjct: 130 PLNPLPPSKY 139



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 2/81 (2%)

Query: 366 FSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  + ++   G + + L +  S  + P +SP G+S+     ++      ++ + LN
Sbjct: 20  QETGWDKVFLIPASGGKPKQLTKGESEDETPVYSPDGKSIAIVSNREFAEEHHIWIVPLN 79

Query: 425 G-RNETLINTPAYASDPQWVG 444
           G +   L +     SDPQW  
Sbjct: 80  GSKPRRLTHLAGVESDPQWSP 100



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 37/116 (31%), Gaps = 2/116 (1%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S       + + ++   G   + LT    +    P +SP+ + +A  +  +        +
Sbjct: 17  SGFQETGWDKVFLIPASGGKPKQLTKGESE-DETPVYSPDGKSIAIVSNREFAEEHHIWI 75

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERL 297
                  P+R+ +   +   P++S +G            +   Y+          L
Sbjct: 76  VPLNGSKPRRLTHLAGVESDPQWSPDGTTIYFQRGTALRSPATYTAATNGGEAHPL 131


>gi|260911837|ref|ZP_05918404.1| prolyl oligopeptidase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634048|gb|EEX52171.1| prolyl oligopeptidase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 718

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 82/234 (35%), Gaps = 63/234 (26%)

Query: 266 SSNGKRALI-----SVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GK  +      SVQ++     ++  +       +LT T      A +  +  +I F 
Sbjct: 54  SPDGKLVVYRVAYYSVQENKGHHMLFVSNADGTNKRQLTTTADNETDAVWIENGRRIAFL 113

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------------- 365
           +    K Q++ M+ +GSD+K++++          +SP G  +   K              
Sbjct: 114 T----KGQVWSMKPDGSDRKQLTR-SATDIEGFKFSPDGKKVILVKSLKYTGVIQANPTD 168

Query: 366 -----------FSGEKFAIGV----------MKKDG-SQERLLVEDSNLQAP-------- 395
                           +   V          ++ DG +  + L+E    + P        
Sbjct: 169 LPKATGRKVTDLMYRHWDHYVESILHPFVADVQADGITDGKDLLEGEPYECPMEPFGGVE 228

Query: 396 --TWSPSGRSLIFS-RKKDGD-----TGSKLYSIDLNGRNETLINTPAYASDPQ 441
              WSP  +S+ ++ RKK G      T S +Y  +L     T +  PA    P 
Sbjct: 229 QLAWSPDSKSIAYTCRKKTGREYSISTDSDIYLYELASGKTTNLCKPADYKAPA 282



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 93/314 (29%), Gaps = 85/314 (27%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           + +T    +    +   +   ++ + K  +  M  DG++ + LT S   I    +FSP+ 
Sbjct: 89  RQLTTTADNETDAVWIENGRRIAFLTKGQVWSMKPDGSDRKQLTRSATDIEGF-KFSPDG 147

Query: 224 QKVA------------------------------YATYDDE-----DILRVYLMDTRIDR 248
           +KV                               Y  +D             +    I  
Sbjct: 148 KKVILVKSLKYTGVIQANPTDLPKATGRKVTDLMYRHWDHYVESILHPFVADVQADGITD 207

Query: 249 APKRIGNFR--------SMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSN 292
               +              +    +S + K    + +K            DIY  +L S 
Sbjct: 208 GKDLLEGEPYECPMEPFGGVEQLAWSPDSKSIAYTCRKKTGREYSISTDSDIYLYELASG 267

Query: 293 ATERL-------------TNTL--------------FINISASYSPDSSQIVFES-DREG 324
            T  L             T TL                +++  +SPD   + ++S  R+G
Sbjct: 268 KTTNLCKPADYKAPAVDATKTLKNQAVNHQDRDYNVGYDVNPQFSPDGKYVAWQSMKRDG 327

Query: 325 ----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
               + +L +      D++ +++  +++  D  W+     + F         I      G
Sbjct: 328 CESDRNRLCIYTLATGDKRYVTEAFDSNVDDYCWAANSQTLYFIGVWHGCVNIYQTNLAG 387

Query: 381 SQERLLVEDSNLQA 394
              + L E  +  A
Sbjct: 388 KVMQ-LTEGWHDYA 400



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/342 (15%), Positives = 110/342 (32%), Gaps = 97/342 (28%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+ + S     G   + L V + DG N R LT + D    +  +  N +++A+ T     
Sbjct: 63  RVAYYSVQENKG--HHMLFVSNADGTNKRQLTTTADN-ETDAVWIENGRRIAFLTKG--- 116

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNA 293
             +V+ M        K++    + I   +FS +GK+ ++  S++    +     DL    
Sbjct: 117 --QVWSMKPD-GSDRKQLTRSATDIEGFKFSPDGKKVILVKSLKYTGVIQANPTDLPKAT 173

Query: 294 TERLTN--------------TLFI---------------NISA--------------SYS 310
             ++T+                F+                                 ++S
Sbjct: 174 GRKVTDLMYRHWDHYVESILHPFVADVQADGITDGKDLLEGEPYECPMEPFGGVEQLAWS 233

Query: 311 PDSSQIVFE--------SDREGKEQLYVMQSNGSDQKRI--------------------- 341
           PDS  I +                 +Y+ +        +                     
Sbjct: 234 PDSKSIAYTCRKKTGREYSISTDSDIYLYELASGKTTNLCKPADYKAPAVDATKTLKNQA 293

Query: 342 --SQDKEASYF---DPVWSPQGDLIAFTKF-----SGEKFAIGVMKKDGSQERLLVE--D 389
              QD++ +     +P +SP G  +A+          ++  + +       +R + E  D
Sbjct: 294 VNHQDRDYNVGYDVNPQFSPDGKYVAWQSMKRDGCESDRNRLCIYTLATGDKRYVTEAFD 353

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           SN+    W+ + ++L F     G     +Y  +L G+   L 
Sbjct: 354 SNVDDYCWAANSQTLYFIGVWHG--CVNIYQTNLAGKVMQLT 393



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 5/103 (4%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                    P+FSP+ + VA+ +        D  R+ +              F S +   
Sbjct: 300 DYNVGYDVNPQFSPDGKYVAWQSMKRDGCESDRNRLCIYTLATGDKRYVTEAFDSNVDDY 359

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +++N +           ++IY  +L      +LT       S
Sbjct: 360 CWAANSQTLYFIGVWHGCVNIYQTNLAGKVM-QLTEGWHDYAS 401


>gi|209522729|ref|ZP_03271287.1| YD repeat protein [Arthrospira maxima CS-328]
 gi|209496778|gb|EDZ97075.1| YD repeat protein [Arthrospira maxima CS-328]
          Length = 1603

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 97/255 (38%), Gaps = 20/255 (7%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             ++  ++ +    S+ + S    N++ + + DG   + LT   ++ +    FSPN + + 
Sbjct: 1167 HDQAIWSVKFSPDSQILASASNDNTVKLWNLDGTLSQTLT-GHEKSVNSVNFSPNGRLIV 1225

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A+ D    L  Y            +   R+ +    F+ + +   IS   D ++  + +
Sbjct: 1226 TASTDTTIKLWNY-----EGILVSTLRGHRNTVNHAVFAPDSQTL-ISASADGSIRFWEL 1279

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                    R+  +     +A +SP+S  I   S         V ++N  + + +  +   
Sbjct: 1280 ----QNLPRVWQSQNDIYNAVFSPNSELIASVSS---NNMAIVWETNSLNIRLMFDEHTD 1332

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            +  +  +SP   LIA          + +   +G   R +  D  +   ++SP G+ +   
Sbjct: 1333 TVNNISFSPDSQLIASASNDKT---VKIWNTEGDVLRTINHDFPVWTVSFSPDGQKIASV 1389

Query: 408  RKKDGDTGSKLYSID 422
                 D   +L+ I+
Sbjct: 1390 SD---DQIIRLWDIN 1401



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 104/288 (36%), Gaps = 23/288 (7%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
               QI+      +   W +    I   +       +  F+         + S     ++ 
Sbjct: 1011 TGDQIVSGDQDGTIRIWNQNRELIGSWLANKRKIRRVVFSPNSSGQELIIASAGEDENIK 1070

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            +   DG  I  L      I +   FSP+ Q++A A+ D    +R++   +R       + 
Sbjct: 1071 LWRPDGTLINTLIGHTRDIQWL-SFSPDGQQLASASED--GTIRLW---SRDGDTIAILT 1124

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSP 311
               + +L+  FS + ++ ++S  +   + ++     +   E +T+    +    S  +SP
Sbjct: 1125 GHEAEVLSVSFSPD-EQLIVSSDEMGVIKLW-----NRQGELITSFQGHDQAIWSVKFSP 1178

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            DS  +   S+      + +   +G+  + ++   E S     +SP G LI          
Sbjct: 1179 DSQILASASN---DNTVKLWNLDGTLSQTLT-GHEKSVNSVNFSPNGRLIVTASTDTT-- 1232

Query: 372  AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             I +   +G     L    N +    ++P  ++LI +         +L
Sbjct: 1233 -IKLWNYEGILVSTLRGHRNTVNHAVFAPDSQTLISASADGSIRFWEL 1279



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 81/238 (34%), Gaps = 27/238 (11%)

Query: 192  SLCVMDRDG-------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +L     DG        N+  +  S++ I +   FSPN + +A  + ++       + +T
Sbjct: 1264 TLISASADGSIRFWELQNLPRVWQSQNDI-YNAVFSPNSELIASVSSNN----MAIVWET 1318

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                           +    FS + +    S   D+ + I+  + + +    + N  F  
Sbjct: 1319 NSLNIRLMFDEHTDTVNNISFSPDSQLIA-SASNDKTVKIW--NTEGDVLRTI-NHDFPV 1374

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             + S+SPD  +I   SD    + + +   NG  Q   +     +      S         
Sbjct: 1375 WTVSFSPDGQKIASVSD---DQIIRLWDINGVLQ---TTLIGHTDRINDISFNQQAKIMA 1428

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    I     +GS  R L + S+     +SP+G  L       GD   KL+   
Sbjct: 1429 SVGDNTIKIW--DINGSLIRDLSQGSHFSKVAFSPNGTLLAVGT---GDGSVKLWETS 1481



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 73/166 (43%), Gaps = 27/166 (16%)

Query: 270  KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            ++ +  +++  A  ++ V+      +RL+ +    +S S++P   QIV   D++G  +++
Sbjct: 969  RQPVTEIERRTASSLWEVNNIFRERDRLSESFGGILSLSFNPTGDQIV-SGDQDGTIRIW 1027

Query: 330  VMQ--------SNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKFAIGVMKKD 379
                       +N    +R+           V+SP   G  +     +GE   I + + D
Sbjct: 1028 NQNRELIGSWLANKRKIRRV-----------VFSPNSSGQELIIAS-AGEDENIKLWRPD 1075

Query: 380  GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            G+    L+    ++Q  ++SP G+ L  + +   D   +L+S D +
Sbjct: 1076 GTLINTLIGHTRDIQWLSFSPDGQQLASASE---DGTIRLWSRDGD 1118


>gi|145551881|ref|XP_001461617.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124429452|emb|CAK94244.1| unnamed protein product [Paramecium tetraurelia]
          Length = 887

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 82/211 (38%), Gaps = 22/211 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            NIRY+     +++    +SPN Q +   +        +YL +    +  +++    S +
Sbjct: 259 GNIRYVIEGEREVMSL-CYSPNCQILGACS-----GKFIYLWNLYTGKQKQKLTGHNSYV 312

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFE 319
            A  FSS+G +   SV  D  + I+ V ++     +     + +     +SPD++ I F 
Sbjct: 313 KAVSFSSDGLKLA-SVDVDNTLYIWDV-IKGKQIIQ-----YDDCYPVCFSPDAAMIAFA 365

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---KFSGEKFAIGVM 376
                   +Y++     ++K I +          +SP G  +A     + +G    + + 
Sbjct: 366 ---GLNYNIYLLDVETGEEKAIFKRHYTEILSICFSPDGTTLASGGGDRRTGSCSRVYLW 422

Query: 377 KKDGSQER--LLVEDSNLQAPTWSPSGRSLI 405
                Q +  L        +  +SP G +L 
Sbjct: 423 DLKTGQLKNELCYMKCRFTSVCFSPDGTTLA 453



 Score = 75.4 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 99/308 (32%), Gaps = 56/308 (18%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             +WDV   KQII  ++               DD Y           + I F   +    
Sbjct: 333 LYIWDVIKGKQII--QY---------------DDCYPVCFSPD---AAMIAFAGLN---- 368

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTR 245
               ++ ++D +    + +       +    FSP+   +A            RVYL D +
Sbjct: 369 ---YNIYLLDVETGEEKAIFKRHYTEILSICFSPDGTTLASGGGDRRTGSCSRVYLWDLK 425

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
             +    +   +    +  FS +G     SV  +    I   ++++   E         I
Sbjct: 426 TGQLKNELCYMKCRFTSVCFSPDGTTLAASVINN----IIVWNVETGEEEYFLQCYHKEI 481

Query: 304 NISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           N+   +S D   +V        F S+R+    +         Q+  S   + +     +S
Sbjct: 482 NL-ICFSSDGRMLVSGSGQYDDFISNRD--SMIRFWDFKSLKQEVNSVGHKGNVKQVCFS 538

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGD 413
           P G  +A         +I +      Q+   +E       +  +SP G +L       G 
Sbjct: 539 PDGTTLASGSRD---MSIHLWDVKTGQQMFKLEGHEHCVNSVCFSPDGITLA-----SGK 590

Query: 414 TGSKLYSI 421
           +   ++ +
Sbjct: 591 SYICIWDV 598



 Score = 73.1 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 119/365 (32%), Gaps = 64/365 (17%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG------RV------IKEGKDRL 124
               +     +   I+N DS+ RF D+ SL  +V   G      +V              
Sbjct: 490 GRMLVSGSGQYDDFISNRDSMIRFWDFKSLKQEVNSVGHKGNVKQVCFSPDGTTLASGSR 549

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            +   LWDVK  +Q+   +            H     +        G             
Sbjct: 550 DMSIHLWDVKTGQQMFKLE-----------GHEHC--VNSVCFSPDGI------------ 584

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                K+ +C+ D       +     ++ +    FSP+   +A  +YD+     + L D 
Sbjct: 585 TLASGKSYICIWDVKTGQQMFKLEGHEKCVDSVCFSPDGTTLASGSYDN----SIRLWDV 640

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +  +   ++      +++  FS  G     S  +D ++ ++  D+++   +++       
Sbjct: 641 KTGQQKAKLDGHSEAVISVYFSPVGTTLA-SGSRDMSIRLW--DVKTG--QQMFKLEGHE 695

Query: 305 ISASYSPDSSQIVF------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +   +S  SS   +       SD      + +       Q    +  E       +SP G
Sbjct: 696 MLCQFSSISSPGWYYIRHLVGSDMS----IRLWDVKTGQQMFKLEGHERYVNSVCFSPDG 751

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             +A         +I +   +  Q+  +L   +  + +  +S  G +L        D   
Sbjct: 752 TTLASGSAD---HSIRLWDVNSGQQMFKLEGHEKCVNSVCFSSDGTTLASGSD---DHSI 805

Query: 417 KLYSI 421
           +L+ +
Sbjct: 806 RLWDV 810



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 56/168 (33%), Gaps = 20/168 (11%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S NG     S  K     I   +L+      +       +S  YSP+   +   S   G
Sbjct: 236 YSPNGHYFASSSNKS----IILWNLRRGNIRYVIEGEREVMSLCYSPNCQILGACS---G 288

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           K  +Y+       QK+      +      +S  G  +A        +   V+K     ++
Sbjct: 289 KF-IYLWNLYTGKQKQKLTGHNSYVKAVSFSSDGLKLASVDVDNTLYIWDVIK----GKQ 343

Query: 385 LLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           ++    +   P  +SP    + F+          +Y +D+    E  I
Sbjct: 344 II--QYDDCYPVCFSPDAAMIAFA-----GLNYNIYLLDVETGEEKAI 384


>gi|193215349|ref|YP_001996548.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Chloroherpeton thalassium ATCC 35110]
 gi|193088826|gb|ACF14101.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Chloroherpeton thalassium ATCC 35110]
          Length = 631

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 69/194 (35%), Gaps = 9/194 (4%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +   P  SS+  R            ++  +  S    +LT          + P    I+F
Sbjct: 45  ITGEPSLSSDANRFTFLWDITGKKQVWVAEFASTFPLQLTFLSEEITFVEWVPKHELILF 104

Query: 319 ESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIG 374
            +     G  QLY+++ NGSD KRI+    A Y    +S  G  +A+             
Sbjct: 105 GAKTGAAGTTQLYLIKPNGSDLKRITSKDSAEYRFKAFSNDGKWMAYEANARKANILDAY 164

Query: 375 VMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN- 432
            M  +  + RL+  + +   P ++SP    L+ S+       + LY  DL    + L+  
Sbjct: 165 TMNLETLERRLIAAEDDCVRPISFSPDASYLLLSKGNQA-VNNDLYLADLKTLKQVLLTK 223

Query: 433 --TPAYASDPQWVG 444
               A      W  
Sbjct: 224 HKGNAIYHGGDWTP 237



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 60/144 (41%), Gaps = 5/144 (3%)

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           ++I    S S D+++  F  D  GK+Q++V +   +   +++   E   F   W P+ +L
Sbjct: 43  MYITGEPSLSSDANRFTFLWDITGKKQVWVAEFASTFPLQLTFLSEEITFVE-WVPKHEL 101

Query: 361 IAFTKFSG--EKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           I F   +G      + ++K +GS  + +   + +  +   +S  G+ + +          
Sbjct: 102 ILFGAKTGAAGTTQLYLIKPNGSDLKRITSKDSAEYRFKAFSNDGKWMAYEANARKANIL 161

Query: 417 KLYSIDLNGRNETLINTPAYASDP 440
             Y+++L      LI        P
Sbjct: 162 DAYTMNLETLERRLIAAEDDCVRP 185



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 98/286 (34%), Gaps = 24/286 (8%)

Query: 130 LWDVKDRKQIIGKKFFSS-PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           LWD+  +KQ+   +F S+ P     ++  I          E    +  ILF +++  +G 
Sbjct: 61  LWDITGKKQVWVAEFASTFPLQLTFLSEEI-------TFVEWVPKHELILFGAKTGAAGT 113

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRID 247
               L ++  +G++++ +T           FS + + +AY     + +IL  Y M+    
Sbjct: 114 T--QLYLIKPNGSDLKRITSKDSAEYRFKAFSNDGKWMAYEANARKANILDAYTMNLET- 170

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLF--IN 304
              + I      +    FS +    L+S   +    D+Y  DL++     LT      I 
Sbjct: 171 LERRLIAAEDDCVRPISFSPDASYLLLSKGNQAVNNDLYLADLKTLKQVLLTKHKGNAIY 230

Query: 305 ISASYSPDSSQIVFESDREGKEQL--------YVMQSNGSDQKRISQDKEASYFDPVWSP 356
               ++PD + +   +                Y           IS   +    +   S 
Sbjct: 231 HGGDWTPDGNALYVSTTENETFHTLALLTLVKYRRSVVRGKLSPIS-LGKYDLAEFHLSN 289

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            G   ++T          V      +   L +  ++ +  ++   +
Sbjct: 290 DGKYFSYTLLQDGYSRTVVQNLKTRRTIELDDADDVISADFTEDSK 335



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 71/212 (33%), Gaps = 12/212 (5%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           SR  I  EP  S +  +  +         +   +       P ++      I    +   
Sbjct: 41  SRMYITGEPSLSSDANRFTFLWDITGK--KQVWVAEFASTFPLQLTFLSEEITFVEWVPK 98

Query: 269 GKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGK 325
            +  L   +        +Y +    +  +R+T+         ++S D   + +E++    
Sbjct: 99  HELILFGAKTGAAGTTQLYLIKPNGSDLKRITSKDSAEYRFKAFSNDGKWMAYEANARKA 158

Query: 326 EQL--YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQ 382
             L  Y M     + +R+   ++       +SP    +  +K +      + +      +
Sbjct: 159 NILDAYTMNLETLE-RRLIAAEDDCVRPISFSPDASYLLLSKGNQAVNNDLYLADLKTLK 217

Query: 383 ERLLVE---DSNLQAPTWSPSGRSLIFSRKKD 411
           + LL +   ++      W+P G +L  S  ++
Sbjct: 218 QVLLTKHKGNAIYHGGDWTPDGNALYVSTTEN 249


>gi|254424854|ref|ZP_05038572.1| hypothetical protein S7335_5015 [Synechococcus sp. PCC 7335]
 gi|196192343|gb|EDX87307.1| hypothetical protein S7335_5015 [Synechococcus sp. PCC 7335]
          Length = 1169

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 93/257 (36%), Gaps = 19/257 (7%)

Query: 160 DDIYQSITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           D+ Y        D+   + F    + +VSG   + L +     +          Q+    
Sbjct: 572 DNQYLRTFRGHTDWVYSVAFSPDGQYLVSGSGDSHLKLWAISNSVCIKTFKGHSQLAMSA 631

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q++A  + D      + L D +  +  + +      +    FS +G+    S  
Sbjct: 632 VFSPDGQQIASGSSDQ----TIKLWDLQSGQCQRTLVGHTGALRNVVFSEDGRTLA-SGS 686

Query: 278 KDEAMDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQ-LYVMQSN 334
            D+ +  +  D QS    +   +    I     +SP+   +V      G +Q + +    
Sbjct: 687 IDQTIRFW--DRQSGHCFKTIESPNHGI-WEIDFSPNGQLLV----SGGNDQTVRIWNVQ 739

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                R     + S +   + P G+ I    + G    I  +     ++ LL   S + +
Sbjct: 740 TGACIRTLTGHQNSVWTVAFDPSGNRIVSGSYDG-VIKIWNVHSGECEKSLLGHTSWMWS 798

Query: 395 PTWSPSGRSLIFSRKKD 411
             +S  G++L +S  +D
Sbjct: 799 VVFSKDGKTL-YSSNQD 814



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/320 (13%), Positives = 104/320 (32%), Gaps = 51/320 (15%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            +          +LWD++  +    +       + R +           +  E G     
Sbjct: 638 QQIASGSSDQTIKLWDLQSGQ--CQRTLVGHTGALRNV-----------VFSEDG----- 679

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG I  ++   DR   +      S +  ++E  FSPN Q +        + 
Sbjct: 680 -----RTLASGSIDQTIRFWDRQSGHCFKTIESPNHGIWEIDFSPNGQLLV----SGGND 730

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TE 295
             V + + +     + +   ++ +    F  +G R + S   D  + I+  ++ S    +
Sbjct: 731 QTVRIWNVQTGACIRTLTGHQNSVWTVAFDPSGNRIV-SGSYDGVIKIW--NVHSGECEK 787

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L        S  +S D   + + S+++   +++   +      R       + +   +S
Sbjct: 788 SLLGHTSWMWSVVFSKDGKTL-YSSNQDRTVRIW--NAQTGYCLRTLSGYTNTIWSLAFS 844

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQE-----------RLLVEDSNLQAPTWSPSGRSL 404
                +A          I +    G+             + + ++S +   ++ P+   L
Sbjct: 845 ANEKTLASGSHDK---NIRLWNLVGTDLAEGSVAEQKCSQTIPQNSPVLDLSFFPNSEFL 901

Query: 405 IFSRKKDGDTGSKLYSIDLN 424
                  G   ++L   DLN
Sbjct: 902 A---SAGGIAAAELNVWDLN 918



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 17/206 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A A +    +  ++L     ++  +        + +  FS +G+  + S  
Sbjct: 548 ALSPDNTLMALADH----LGNIHLWQLEDNQYLRTFRGHTDWVYSVAFSPDGQYLV-SGS 602

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++++   S   +       + +SA +SPD  QI   S     + + +       
Sbjct: 603 GDSHLKLWAIS-NSVCIKTFKGHSQLAMSAVFSPDGQQIASGSS---DQTIKLWDLQSGQ 658

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAP 395
            +R       +  + V+S  G  +A          I    +        +E  N      
Sbjct: 659 CQRTLVGHTGALRNVVFSEDGRTLASGSIDQT---IRFWDRQSGHCFKTIESPNHGIWEI 715

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +SP+G+ L+       D   +++++
Sbjct: 716 DFSPNGQLLV---SGGNDQTVRIWNV 738



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 95/262 (36%), Gaps = 39/262 (14%)

Query: 119  EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
                    E  +WD+  ++ +  +K     +  R +A      I+            R++
Sbjct: 903  SAGGIAAAELNVWDLNSQRLL--RKLEGHSSVVRAVA------IHPDGDRIASAGADRVI 954

Query: 179  FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
             +        +KN LC+                 +++  RFS +   +A A  +      
Sbjct: 955  KLW------SLKNGLCL---------KTLAGHKDLIWTLRFSHDGTMLASAGLEG----A 995

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
            V L D       K +   +   +A  FS +  R L SV  D  + ++  +LQ++  +R L
Sbjct: 996  VKLWDFEGGTCLKTLEGHKDQTVAIAFSKD-DRLLGSVSVDTTIKLW--NLQTDQCDRTL 1052

Query: 298  TNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            T      ++ ++SP  +Q V  S   +G   + +   +     R  Q+   +     +SP
Sbjct: 1053 TGHTAPVVAIAFSP--TQPVVASGSFDGS--IKIWDMDSGQCIRTLQEHSQTVSTLDFSP 1108

Query: 357  QGDLIAFTKFSGEKFAIGVMKK 378
             G ++A     GE   I +   
Sbjct: 1109 NGKILA---SGGEDSVIRLWDT 1127



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 73/212 (34%), Gaps = 11/212 (5%)

Query: 211  DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            +  + +  F PN + +A  +        + + D    R  +++    S++ A     +G 
Sbjct: 886  NSPVLDLSFFPNSEFLA--SAGGIAAAELNVWDLNSQRLLRKLEGHSSVVRAVAIHPDGD 943

Query: 271  RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            R   S   D  + ++S+       + L     +  +  +S D + +   +  EG  +L+ 
Sbjct: 944  RIA-SAGADRVIKLWSL-KNGLCLKTLAGHKDLIWTLRFSHDGTMLA-SAGLEGAVKLW- 999

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                G    +  +  +       +S    L+           +  ++ D     L    +
Sbjct: 1000 -DFEGGTCLKTLEGHKDQTVAIAFSKDDRLLGSVSVD-TTIKLWNLQTDQCDRTLTGHTA 1057

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             + A  +SP+   +        D   K++ +D
Sbjct: 1058 PVVAIAFSPTQPVVA---SGSFDGSIKIWDMD 1086


>gi|255015734|ref|ZP_05287860.1| hypothetical protein B2_17653 [Bacteroides sp. 2_1_7]
          Length = 489

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 66/479 (13%), Positives = 147/479 (30%), Gaps = 113/479 (23%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSP------VSI--AFTKFVSIDELGGKV 65
           ++++C ++  +            +      +  P      V +  A   F  +D+    +
Sbjct: 3   RLSICWIIGCLLELVACRPEVPTQAEQGETDVFPDYREVTVPVNMAPPNFKLVDQQLQGI 62

Query: 66  SE--------VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
                     +++ D     VFNL                    DW  L           
Sbjct: 63  IRLKTMNGELIIAAD---HGVFNLPET-----------------DWKVLSQDA------- 95

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSR 176
                              KQI    +F  P + W+++    S  IY S          R
Sbjct: 96  -----------------QGKQIDVTVYFREPQSDWKQM----SFPIYVSRDSVDAYLVYR 134

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            +F    + + +     CV +    +I    + +   +          +++ +      +
Sbjct: 135 RIFPGYRMWNEMGIYQRCVENYVEKSILDNQSTNNSCMNCHAFCERQGEQMLFHQRGSHN 194

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------DEAMDIYSVD 288
              +         A +R G   S +  P +  +G+    S  +        +   I   D
Sbjct: 195 GTYLIDHRQVKKIALERDGKPASFVY-PYWHPSGRYVAFSTNETHQDFHLSDENRIEVYD 253

Query: 289 LQS------NATERLTNTL------FINISASYSPDSSQIVFES---------DREGKEQ 327
           ++S         ER+ ++             +++PD + ++F S          R+ +  
Sbjct: 254 VESDVLIYDTEKERVFSSPLLASMACYETFPTFTPDGNYLLFCSADSVCMPENYRDVRYN 313

Query: 328 LYVMQSN------GSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIG----- 374
           L  +  +      G+    +   +EA      P  SP G  + +T      F+I      
Sbjct: 314 LLRVAFDPKDGSIGTQVDTLYNAREAGRSVKFPRVSPDGKRLLYTVSDYGNFSIWHKDAD 373

Query: 375 --VMKKDGSQERLL--VEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             ++         L  V   ++++  +WS + R  +FS ++     ++ Y + ++ R +
Sbjct: 374 LHMLDLSTGAIDSLPEVNSPDVESYHSWSGNSRWFVFSSRRGDGLFTRPYLVHVDERGQ 432


>gi|268316730|ref|YP_003290449.1| WD40 domain-containing protein beta Propeller [Rhodothermus marinus
           DSM 4252]
 gi|262334264|gb|ACY48061.1| WD40 domain protein beta Propeller [Rhodothermus marinus DSM 4252]
          Length = 947

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 97/271 (35%), Gaps = 35/271 (12%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           ++V G   +E     R+     D K  +    + F ++            D +Y      
Sbjct: 320 LVVYGFGYRERPGYYRI-----DAKTGRMTRLRTFATTE-----------DYLYAPTADR 363

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +    +R  +V + ++SG +   +  MD +G   R     R   ++ P  +P+       
Sbjct: 364 QALLVAR--YVPDPLLSGRLSAEVYRMDLNGKVQRLTRGGR---VYAPVEAPDGS----I 414

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIY- 285
                D      +    D +   +  F+ +    LAP     G R  + + +     ++ 
Sbjct: 415 WALQNDGFYNRWVRIGADGSITPVAAFKEVFFVQLAPA--PQGDRVAVLLNRHGRQGLFE 472

Query: 286 -SVDLQSNATER--LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
             +   S  T R  L          S+S D   ++F +D +    +Y ++      +R++
Sbjct: 473 ARIGPDSRVTLRPWLAFRQGAIYDVSWSADGQWLLFTADPDSVPNIYALEVASGRVRRLT 532

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                +  +P  SP G  +AF  +  E++ +
Sbjct: 533 NVAFGAL-EPALSPDGRHLAFIHYRHERYEL 562



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 76/215 (35%), Gaps = 23/215 (10%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI--LFVSESVVSGIIK 190
             DR+ ++  ++   P     ++  +S ++Y+     K    +R   ++       G   
Sbjct: 360 TADRQALLVARYVPDP----LLSGRLSAEVYRMDLNGKVQRLTRGGRVYAPVEAPDG--- 412

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRF-----------SPNQQKVAYATYDDEDILRV 239
            S+  +  DG   R++    D  +                +P   +VA            
Sbjct: 413 -SIWALQNDGFYNRWVRIGADGSITPVAAFKEVFFVQLAPAPQGDRVAVLLNRHGRQGLF 471

Query: 240 YLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                   R   R  +   +  I    +S++G+  L +   D   +IY++++ S    RL
Sbjct: 472 EARIGPDSRVTLRPWLAFRQGAIYDVSWSADGQWLLFTADPDSVPNIYALEVASGRVRRL 531

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           TN  F  +  + SPD   + F   R  + +L  + 
Sbjct: 532 TNVAFGALEPALSPDGRHLAFIHYRHERYELVRIP 566



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 66/189 (34%), Gaps = 16/189 (8%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              L   +    ++   +R+      + AP  + +G   + ++Q D   + +       +
Sbjct: 378 SGRLSAEVYRMDLNGKVQRLTRG-GRVYAPVEAPDGS--IWALQNDGFYNRWVRIGADGS 434

Query: 294 TERLTNTL---FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-----K 345
              +       F+ ++ +  P   ++    +R G++ L+  +       R++       +
Sbjct: 435 ITPVAAFKEVFFVQLAPA--PQGDRVAVLLNRHGRQGLFEARI--GPDSRVTLRPWLAFR 490

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSL 404
           + + +D  WS  G  + FT        I  ++    + R L         P  SP GR L
Sbjct: 491 QGAIYDVSWSADGQWLLFTADPDSVPNIYALEVASGRVRRLTNVAFGALEPALSPDGRHL 550

Query: 405 IFSRKKDGD 413
            F   +   
Sbjct: 551 AFIHYRHER 559



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 52/285 (18%), Positives = 94/285 (32%), Gaps = 61/285 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAP----KRIGNFRSMILA-PRFSSNGKRAL 273
           +   +Q  A          R  +M     RAP    + + + R +IL  P +  +    +
Sbjct: 263 WYGTRQFPATLGRRFRREARAQVMADLKRRAPFTEVQVVRSERGLILRRPYWLDDRTLVV 322

Query: 274 ISVQKDEAMDIYSVDLQSNATERL-------------TNTLFINISASYSPDS------S 314
                 E    Y +D ++    RL             T      + A Y PD       S
Sbjct: 323 YGFGYRERPGYYRIDAKTGRMTRLRTFATTEDYLYAPTADRQALLVARYVPDPLLSGRLS 382

Query: 315 QIVFESDREGKEQ------------------LYVMQSNG-----------SDQKRISQDK 345
             V+  D  GK Q                  ++ +Q++G                ++  K
Sbjct: 383 AEVYRMDLNGKVQRLTRGGRVYAPVEAPDGSIWALQNDGFYNRWVRIGADGSITPVAAFK 442

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAI--GVMKKDGS---QERLLVEDSNLQAPTWSPS 400
           E  +     +PQGD +A       +  +    +  D     +  L      +   +WS  
Sbjct: 443 EVFFVQLAPAPQGDRVAVLLNRHGRQGLFEARIGPDSRVTLRPWLAFRQGAIYDVSWSAD 502

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
           G+ L+F+   D D+   +Y++++ +GR   L N    A +P    
Sbjct: 503 GQWLLFTA--DPDSVPNIYALEVASGRVRRLTNVAFGALEPALSP 545


>gi|311895970|dbj|BAJ28378.1| putative tricorn protease homolog [Kitasatospora setae KM-6054]
          Length = 1067

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 63/193 (32%), Gaps = 23/193 (11%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G       + D    ++   L+     RLT       +  +SPD   + + S R+G  ++
Sbjct: 16  GDVVAFVAEDD----VWLAPLEGGRAWRLTADRAPVATPRFSPDGRSLAWTSTRDGAPEV 71

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL 385
           +V    G   +R++           W+  G  +A T    E         +  DG +   
Sbjct: 72  HVGAVEGGPARRLTYWGSPFTALVGWTADGRPVAITAAGQETIRRTWAFALPLDGGEPER 131

Query: 386 LVED-----SNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLYSIDLNGRNETLI 431
           L        +    P  +  GR L+         + R + G  G +L+ I   G      
Sbjct: 132 LPYGPIGALAFEPVPEGASGGRVLLGTHNREAAHWKRYRGGRAG-RLW-IGAAGFEPLHA 189

Query: 432 NTPAYASDPQWVG 444
                   P WVG
Sbjct: 190 GLDGQLECPMWVG 202



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 83/225 (36%), Gaps = 30/225 (13%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              VA+   DD     V+L      RA  R+   R+ +  PRFS +G+    +  +D A 
Sbjct: 16  GDVVAFVAEDD-----VWLAPLEGGRAW-RLTADRAPVATPRFSPDGRSLAWTSTRDGAP 69

Query: 283 DIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQL-----YVMQSNGS 336
           +++   ++     RLT       +   ++ D   +   +   G+E +     + +  +G 
Sbjct: 70  EVHVGAVEGGPARRLTYWGSPFTALVGWTADGRPVAITA--AGQETIRRTWAFALPLDGG 127

Query: 337 DQKRISQDKEASYF---DPVWSPQGDLIA---------FTKFSGEKFAIGVMKKDGSQER 384
           + +R+      +      P  +  G ++          + ++ G +     +   G +  
Sbjct: 128 EPERLPYGPIGALAFEPVPEGASGGRVLLGTHNREAAHWKRYRGGRAGRLWIGAAGFEPL 187

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
               D  L+ P W   G  + F    +G    +LYS   +G +  
Sbjct: 188 HAGLDGQLECPMWV--GDRIAFLSDHEGTG--RLYSSLPDGSDLR 228



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 80/258 (31%), Gaps = 28/258 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +   +G     LT  R  +   PRFSP+ + +A+ +  D     V++       A +
Sbjct: 26  DVWLAPLEGGRAWRLTADRAPVA-TPRFSPDGRSLAWTSTRDG-APEVHVGAVEGGPARR 83

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE---AMDIYSVDLQSNATERLTNTL----FIN 304
                        ++++G+   I+    E       +++ L     ERL           
Sbjct: 84  LTYWGSPFTALVGWTADGRPVAITAAGQETIRRTWAFALPLDGGEPERLPYGPIGALAFE 143

Query: 305 ISASYSPDSS-------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                +           +      R    +   +    +  + +    +     P+W   
Sbjct: 144 PVPEGASGGRVLLGTHNREAAHWKRYRGGRAGRLWIGAAGFEPLHAGLDGQLECPMWV-- 201

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           GD IAF         +     DGS  R      D        +  G  +++ R       
Sbjct: 202 GDRIAFLSDHEGTGRLYSSLPDGSDLRAHSPAGDGFYDRQA-ATDGTRVVWQR------A 254

Query: 416 SKLYSI-DLNGRNETLIN 432
            +L+ + DL+G     ++
Sbjct: 255 GRLWLLDDLDGAAPRPLD 272



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 55/300 (18%), Positives = 108/300 (36%), Gaps = 43/300 (14%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD- 233
            RI F+S+   +G + +SL     DG+++R  +P+ D        + +  +V +      
Sbjct: 203 DRIAFLSDHEGTGRLYSSL----PDGSDLRAHSPAGDGFYDRQA-ATDGTRVVWQRAGRL 257

Query: 234 ----------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEA 281
                        L V     R  R P        +  A   + +  G+ A + V+    
Sbjct: 258 WLLDDLDGAAPRPLDVAPAGPRTRRHPHPTPAAGQVETA---APDRTGRAAAVVVRG--- 311

Query: 282 MDIYSVDLQSNATERLTNTLFI-NISASYSP--DSSQ-IVFESDREGKEQL-YVMQSNGS 336
             ++ +  +      L  T  + N  A   P  D +Q  V+ +D +G + L Y     G+
Sbjct: 312 -TVHWLTHRDGPARVLDETPGVRNRLARVVPGEDGAQGAVWVTDADGDDALEYAPAVLGA 370

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP- 395
           +++R++  +       V SP G  +A     G    + +          L    + +   
Sbjct: 371 ERRRLAAGRLGRVRALVASPDGKQLAVAAHDGRVLLVALSD---GAVNELARSGDGEVSG 427

Query: 396 -TWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLIN-------TPAYASDPQWVGFM 446
             +SP    L +S+   G     ++   DL  R  +          +PA+ +D   + F+
Sbjct: 428 LVFSPDSAWLAWSQPVLGPWSLRQIMLADLTSRTVSEATPQRFHDYSPAFTADGAHLAFL 487



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 52/323 (16%), Positives = 104/323 (32%), Gaps = 35/323 (10%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-R 198
            G+ + S P      AH+ + D           F  R      + V       L ++D  
Sbjct: 214 TGRLYSSLPDGSDLRAHSPAGD----------GFYDRQAATDGTRVVWQRAGRLWLLDDL 263

Query: 199 DGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL------MDTRIDRAP 250
           DGA  R L   P+  +    P  +P   +V  A  D        +        T  D   
Sbjct: 264 DGAAPRPLDVAPAGPRTRRHPHPTPAAGQVETAAPDRTGRAAAVVVRGTVHWLTHRDGPA 323

Query: 251 KRIGNFRSM-ILAPRFSS--NGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFINI 305
           + +     +     R     +G +  + V   +  D              RL       +
Sbjct: 324 RVLDETPGVRNRLARVVPGEDGAQGAVWVTDADGDDALEYAPAVLGAERRRLAAGRLGRV 383

Query: 306 SASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            A   SPD  Q+   +      ++ ++  +      +++  +      V+SP    +A++
Sbjct: 384 RALVASPDGKQLAVAAH---DGRVLLVALSDGAVNELARSGDGEVSGLVFSPDSAWLAWS 440

Query: 365 KFSGEKFAIG-VMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +     +++  +M  D +   +     +  +  +P ++  G  L F   +  D     ++
Sbjct: 441 QPVLGPWSLRQIMLADLTSRTVSEATPQRFHDYSPAFTADGAHLAFLSVRTFDPVYDQHA 500

Query: 421 IDLN---GRNETLINTPAYASDP 440
            DL+   G    L+   A    P
Sbjct: 501 FDLSFPGGTRPYLLTLAADTPSP 523


>gi|21233438|ref|NP_639355.1| dipeptidyl-peptidase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66770402|ref|YP_245164.1| dipeptidyl-peptidase [Xanthomonas campestris pv. campestris str.
           8004]
 gi|21115281|gb|AAM43237.1| dipeptidyl-peptidase [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575734|gb|AAY51144.1| dipeptidyl-peptidase [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 801

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 86/214 (40%), Gaps = 17/214 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATE---RLT 298
            + +RA +   +      A  +S +G+   + ++  +  D +   VDL     +   RL+
Sbjct: 334 LKGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDLDDAKLQPRHRLS 393

Query: 299 NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++ +IN   +   + PD+  +   S+  G  QLY ++ NG  ++R           PV S
Sbjct: 394 DSAWINWGFNEFGWLPDNRTLWLLSEESGYSQLYTVEGNGKPRQR--TRGTFEVSAPVPS 451

Query: 356 PQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  + F   +     + +  +     Q   +     ++  + SP+G+ ++  R     
Sbjct: 452 ADGSGMFFLCNRKWPGDYEVCKLDLRTDQLSEVTALDGVEDFSLSPNGQQVL-VRYSGSY 510

Query: 414 TGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
              +L  +   G   T++    T A+ + P W+ 
Sbjct: 511 LPPQLAVVPAAGGQATVLTDTRTAAFKAQP-WIA 543



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 53/369 (14%), Positives = 105/369 (28%), Gaps = 85/369 (23%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +D   ++ +  +         R  A T        +T    +  SR  F S+        
Sbjct: 106 YDAGRQRMLFTRNGDIFLRDLRSGALT-------QLT-RSNEVESRPQFASDGGAIWRAG 157

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPN-----QQKVAYATYDDEDILRVYLMDTR 245
           N+      DG   +      ++   +P  +P      +Q++A       D  +   + T+
Sbjct: 158 NNWYHWRADGGTAQVAVVKAER---DPNAAPKADVLREQQLATLATLRRDREQREALRTQ 214

Query: 246 IDRAPKRIGNFRSM---------ILAPRFSSNGKRALISVQKDEAMD------------- 283
            D   +                 I+    S +G+  L+  Q   A +             
Sbjct: 215 DDAWRRADSTRAPAPVYLGDEVEIVDSALSPDGRHLLVVTQAKGADEGQDGKMPKYVTES 274

Query: 284 ---------------------IYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFES 320
                                ++ VD+ + +   L+      I            +    
Sbjct: 275 GYEEFQEVRTRVGRNAPVAHALWLVDVAAGSARALSFDPLPGIATDP--------LAALR 326

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKK 378
               K+        G+   R+  D + S     WS  G  +A        +   I  +  
Sbjct: 327 KAAKKD-----PLKGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDL 381

Query: 379 DGSQER---LLVED----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           D ++ +    L +            W P  R+L    ++ G   S+LY+++ NG+     
Sbjct: 382 DDAKLQPRHRLSDSAWINWGFNEFGWLPDNRTLWLLSEESG--YSQLYTVEGNGKPRQRT 439

Query: 432 NTPAYASDP 440
                 S P
Sbjct: 440 RGTFEVSAP 448



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 85/244 (34%), Gaps = 47/244 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFR--SMILA-PRFSSNGKRAL 273
            +  + ++V Y    +   +R  Y        A +R+ +     +  A P + +  +R L
Sbjct: 55  WWQWDGKQVQYQLKREGSPVRDTYRQPAAGGTAAERVADTARAGLDAANPSYDAGRQRML 114

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +   D    I+  DL+S A  +LT +  +     ++ D   I     R G    Y  ++
Sbjct: 115 FTRNGD----IFLRDLRSGALTQLTRSNEVESRPQFASDGGAIW----RAGNN-WYHWRA 165

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL------- 386
           +G   +      E    DP  +P+ D++       +   +  +++D  Q   L       
Sbjct: 166 DGGTAQVAVVKAE---RDPNAAPKADVL----REQQLATLATLRRDREQREALRTQDDAW 218

Query: 387 --VEDSNLQAPTW------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              + +   AP +            SP GR L+   +  G    +      +G+    + 
Sbjct: 219 RRADSTRAPAPVYLGDEVEIVDSALSPDGRHLLVVTQAKGADEGQ------DGKMPKYVT 272

Query: 433 TPAY 436
              Y
Sbjct: 273 ESGY 276



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 67/189 (35%), Gaps = 13/189 (6%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGA--NIRYLTPSRDQILFEPR---FSPNQQKVAY 228
           + R + V    V    +  +  +D D A    R+       I +      + P+ + +  
Sbjct: 358 DGRNVAVEIRAVDNKDRW-IASVDLDDAKLQPRHRLSDSAWINWGFNEFGWLPDNRTLWL 416

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYS 286
            + +        L     +  P++       + AP  S++G        +      ++  
Sbjct: 417 LSEESG---YSQLYTVEGNGKPRQRTRGTFEVSAPVPSADGSGMFFLCNRKWPGDYEVCK 473

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDK 345
           +DL+++    +T    +    S SP+  Q++   S      QL V+ + G     ++  +
Sbjct: 474 LDLRTDQLSEVTALDGVEDF-SLSPNGQQVLVRYSGSYLPPQLAVVPAAGGQATVLTDTR 532

Query: 346 EASYFDPVW 354
            A++    W
Sbjct: 533 TAAFKAQPW 541


>gi|145512725|ref|XP_001442278.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409552|emb|CAK74881.1| unnamed protein product [Paramecium tetraurelia]
          Length = 482

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 105/319 (32%), Gaps = 47/319 (14%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            +     D+   + RLW+VK  K                          + I   KG   
Sbjct: 183 SISSCSDDK---QIRLWNVKTGK-------------------------IKQIIKGKGKGK 214

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S     + + ++    +   + +       +    +   +    FSP+   +A  +YD  
Sbjct: 215 SVCFSPNNTTLAFSSDDLGYIWNVKTGKQIFNLGGQSFKVNSICFSPDGTTLASGSYDK- 273

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               + L D R      ++      +    FS +G   L S   D+++ ++  D+ +   
Sbjct: 274 ---SIRLWDVRTGLQKAKLVGHSRKVKNICFSPDGT-ILASCSSDKSIRLW--DVTTGLQ 327

Query: 295 E-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           + +L        S ++SPD S +   S     + + +       +K          +   
Sbjct: 328 KAKLVGHSGFVYSVNFSPDCSTLASGSY---DKSIRLWDVRTGQEKVKLDGHSDWVYSAN 384

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKD 411
           +SP G  +A          I +      Q++  ++  +    +  +SP+G +L       
Sbjct: 385 FSPDGTTLASGSSDDT---IRLWDVKTRQQKAKLDGHSDGVYSVNFSPNGTTLA---SGS 438

Query: 412 GDTGSKLYSIDLNGRNETL 430
            D   +L+ +    + E L
Sbjct: 439 SDESIRLWDVKTGQQKEKL 457



 Score = 77.0 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 68/188 (36%), Gaps = 15/188 (7%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           ++      + +  FS +GK         +   I   ++++   +++        S  +SP
Sbjct: 164 KLDGHSGRVNSVCFSPDGKSI---SSCSDDKQIRLWNVKTGKIKQIIKGKGKGKSVCFSP 220

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGE 369
           +++ + F SD  G    Y+        K+I      S+      +SP G  +A   +  +
Sbjct: 221 NNTTLAFSSDDLG----YIWNVKTG--KQIFNLGGQSFKVNSICFSPDGTTLASGSYD-K 273

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              +  ++    + +L+     ++   +SP G  L        D   +L+ +    +   
Sbjct: 274 SIRLWDVRTGLQKAKLVGHSRKVKNICFSPDGTILA---SCSSDKSIRLWDVTTGLQKAK 330

Query: 430 LINTPAYA 437
           L+    + 
Sbjct: 331 LVGHSGFV 338



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 72/238 (30%), Gaps = 15/238 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ + ++  + D     ++ L + +  +  K+I   +    +  FS
Sbjct: 165 LDGHSGRVNSVCFSPDGKSISSCSDDK----QIRLWNVKTGK-IKQIIKGKGKGKSVCFS 219

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            N      S      +              L    F   S  +SPD + +   S     +
Sbjct: 220 PNNTTLAFSSDDLGYIWNVK---TGKQIFNLGGQSFKVNSICFSPDGTTLASGSY---DK 273

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +       QK           +  +SP G ++A    S +   +  +     + +L+
Sbjct: 274 SIRLWDVRTGLQKAKLVGHSRKVKNICFSPDGTILASCS-SDKSIRLWDVTTGLQKAKLV 332

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                + +  +SP   +L        D   +L+ +        L     +     +  
Sbjct: 333 GHSGFVYSVNFSPDCSTLASGSY---DKSIRLWDVRTGQEKVKLDGHSDWVYSANFSP 387



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 75/223 (33%), Gaps = 27/223 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQ---IIGKKFFSSP----ASWRKIAHTISD------DIY 163
                       RLWDV+   Q   ++G                +A   SD      D+ 
Sbjct: 264 TTLASGSYDKSIRLWDVRTGLQKAKLVGHSRKVKNICFSPDGTILASCSSDKSIRLWDVT 323

Query: 164 QSITGEKGDFNSRILFVSE------SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
             +   K   +S  ++         ++ SG    S+ + D      +         ++  
Sbjct: 324 TGLQKAKLVGHSGFVYSVNFSPDCSTLASGSYDKSIRLWDVRTGQEKVKLDGHSDWVYSA 383

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A  + DD     + L D +  +   ++      + +  FS NG     S  
Sbjct: 384 NFSPDGTTLASGSSDD----TIRLWDVKTRQQKAKLDGHSDGVYSVNFSPNGTTLA-SGS 438

Query: 278 KDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFE 319
            DE++ ++  D+++   + +L        S  +SP     +F 
Sbjct: 439 SDESIRLW--DVKTGQQKEKLDGHEDNVNSICFSPKVQMSLFV 479



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 44/129 (34%), Gaps = 9/129 (6%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              +L        S  +SPD   I   SD    +Q+ +        K+I + K       
Sbjct: 161 ELNKLDGHSGRVNSVCFSPDGKSISSCSD---DKQIRLWNVKTGKIKQIIKGKGKGKSVC 217

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP    +AF+        I  +K       L  +   + +  +SP G +L        
Sbjct: 218 -FSPNNTTLAFSSDDLG--YIWNVKTGKQIFNLGGQSFKVNSICFSPDGTTLASGSY--- 271

Query: 413 DTGSKLYSI 421
           D   +L+ +
Sbjct: 272 DKSIRLWDV 280


>gi|315498016|ref|YP_004086820.1| acylamino-acid-releasing enzyme [Asticcacaulis excentricus CB 48]
 gi|315416028|gb|ADU12669.1| acylamino-acid-releasing enzyme [Asticcacaulis excentricus CB 48]
          Length = 690

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 48/337 (14%), Positives = 106/337 (31%), Gaps = 71/337 (21%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +T  K + ++     + +       N+L + D      + L+ +       P++  +   
Sbjct: 44  LTVNKAETHAAFQVRTLNAEKTQGVNALWLTDLKTGASKPLSTASKGGALSPQWGSDG-- 101

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------- 277
             Y        ++V+  D   D    ++      + + + S +GK  ++S+         
Sbjct: 102 ALYFLSARSGSMQVWKTDLN-DAEAVQVTKLPLDVGSYKLSPDGKGLVLSLAIEESCQTE 160

Query: 278 ---------------------------------KDEAMD-IYSVDLQSNATERLTNT--- 300
                                             D   + ++ V L   A   LT     
Sbjct: 161 EIECTLKVQAEKKDEKSTGVIYDRLFVRHWDTWADGTRNHLFYVPLSGGAAVSLTAGVDG 220

Query: 301 ------LFINISASYSPDSSQIVFESD-------REGKEQLYVMQ-SNGSDQKRISQDKE 346
                        S+SPD   + +          R     +Y +  +N S    +++  +
Sbjct: 221 DVPSKPFGDEAEYSFSPDGKTVYYSVRIAGKDEPRSTNFDIYKVDIANPSTHTNLTEANK 280

Query: 347 ASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSP 399
           A       SP G  +A+       F  ++F I +      + + +  D +  A +  W+ 
Sbjct: 281 AWDTGAEVSPDGKWLAYRAMKRPGFEADQFEIFLRNLATGETKQIAADWDRSADSLKWAA 340

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            G+SL       G T   L+S+++     T ++   +
Sbjct: 341 DGKSLYVVAGDVGKTP--LFSVEIASGKVTPLSKGGH 375



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 64/191 (33%), Gaps = 18/191 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++   +   +                  D   K  G+         FS +GK    SV+
Sbjct: 192 TWADGTRNHLFYVPLSGGAAVSLTAGVDGDVPSKPFGDEAEY----SFSPDGKTVYYSVR 247

Query: 278 -------KDEAMDIYSVDLQS-NATERLT-NTLFINISASYSPDSSQIVFES-DREG--- 324
                  +    DIY VD+ + +    LT      +  A  SPD   + + +  R G   
Sbjct: 248 IAGKDEPRSTNFDIYKVDIANPSTHTNLTEANKAWDTGAEVSPDGKWLAYRAMKRPGFEA 307

Query: 325 -KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            + ++++      + K+I+ D + S     W+  G  +        K  +  ++    + 
Sbjct: 308 DQFEIFLRNLATGETKQIAADWDRSADSLKWAADGKSLYVVAGDVGKTPLFSVEIASGKV 367

Query: 384 RLLVEDSNLQA 394
             L +  ++ A
Sbjct: 368 TPLSKGGHMDA 378



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 76/236 (32%), Gaps = 38/236 (16%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++L D +   +       +   L+P++ S+G        +  +M ++  DL      ++T
Sbjct: 71  LWLTDLKTGASKPLSTASKGGALSPQWGSDGA-LYFLSARSGSMQVWKTDLNDAEAVQVT 129

Query: 299 NTLFINISASYSPDSSQIVFE-----SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                  S   SPD   +V       S +  + +  +        ++ +       F   
Sbjct: 130 KLPLDVGSYKLSPDGKGLVLSLAIEESCQTEEIECTLKVQAEKKDEKSTGVIYDRLFVRH 189

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----------TWSPSGRS 403
           W         T   G +  +  +   G     L    +   P          ++SP G++
Sbjct: 190 WD--------TWADGTRNHLFYVPLSGGAAVSLTAGVDGDVPSKPFGDEAEYSFSPDGKT 241

Query: 404 LIFSRKKDGD-----TGSKLYSID---------LNGRNETLINTPAYASDPQWVGF 445
           + +S +  G      T   +Y +D         L   N+        + D +W+ +
Sbjct: 242 VYYSVRIAGKDEPRSTNFDIYKVDIANPSTHTNLTEANKAWDTGAEVSPDGKWLAY 297



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 59/169 (34%), Gaps = 11/169 (6%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY---LTPSRDQILFEPRFSPNQQKV 226
             D  +    V  +        +  +   D AN      LT +          SP+ + +
Sbjct: 236 SPDGKTVYYSVRIAGKDEPRSTNFDIYKVDIANPSTHTNLTEANKAWDTGAEVSPDGKWL 295

Query: 227 AYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           AY          D   ++L +       +   ++     + +++++GK   +        
Sbjct: 296 AYRAMKRPGFEADQFEIFLRNLATGETKQIAADWDRSADSLKWAADGKSLYVVAGDVGKT 355

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYV 330
            ++SV++ S     L+    ++   ++ P   + VF  S  +   QL+V
Sbjct: 356 PLFSVEIASGKVTPLSKGGHMD---AFVPLKDRFVFAKSGLDYPSQLFV 401


>gi|271961894|ref|YP_003336090.1| hypothetical protein Sros_0315 [Streptosporangium roseum DSM 43021]
 gi|270505069|gb|ACZ83347.1| WD40 repeat-domain-containing protein-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 924

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 55/305 (18%), Positives = 103/305 (33%), Gaps = 42/305 (13%)

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
            L    RLWD+  R+ +                HT    +Y +     G           
Sbjct: 363 SLSGSVRLWDLARRRPLGS----------PLTGHT--GWVYTAAFSHDG----------R 400

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +V+     +  + D        +   R +++    FSP+ + +A    D ED   + L 
Sbjct: 401 RLVTAGEDGTARLWDVATHRQEGVLVRRGRVISA-AFSPDDRLLA-TVGDAEDEGVIQLW 458

Query: 243 DTRIDRAPKRIGNF----RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           DTR     +RIG         +    FS +G+R   +   D A  ++ V  +      L 
Sbjct: 459 DTRT---RRRIGGALKGRNGFVATVAFSPDGRRLA-TGGNDYATQLWDVTTRREVGTGLA 514

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  +  +SPD S +   S  +G  +L+   +    Q               +SP G
Sbjct: 515 GHGGAVTAVRFSPDGSVLA-TSSADGLARLW--DAASGAQIGTLTGHTGYVTSLAFSPDG 571

Query: 359 DLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             +           + + V ++ G+   L      + + ++SP GR L        D  +
Sbjct: 572 RELVTASRDDTARLWDVSVHRQLGAA--LTGGSGPVGSVSFSPDGRRLA---TAHADGVA 626

Query: 417 KLYSI 421
           +++ +
Sbjct: 627 RVWEV 631



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 83/234 (35%), Gaps = 22/234 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISV 276
            FSP+   +   +        V L D    R     +      +    FS +G+R + + 
Sbjct: 351 AFSPDGGLLVTTSLSG----SVRLWDLARRRPLGSPLTGHTGWVYTAAFSHDGRRLV-TA 405

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D    ++  D+ ++  E +       ISA++SPD   +    D E +  + +  +   
Sbjct: 406 GEDGTARLW--DVATHRQEGVLVRRGRVISAAFSPDDRLLATVGDAEDEGVIQLWDTRT- 462

Query: 337 DQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDS 390
            ++RI    + +        +SP G  +A     G  +A  +      +E    L     
Sbjct: 463 -RRRIGGALKGRNGFVATVAFSPDGRRLA---TGGNDYATQLWDVTTRREVGTGLAGHGG 518

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            + A  +SP G  L  S     D  ++L+      +  TL     Y +   +  
Sbjct: 519 AVTAVRFSPDGSVLATSS---ADGLARLWDAASGAQIGTLTGHTGYVTSLAFSP 569



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 102/339 (30%), Gaps = 46/339 (13%)

Query: 129 RLWDVKDRKQIIGKK----FFSSPA---SWRKIAHTISDDIYQ----SITGEKGDFNSRI 177
           RLWD     QI        + +S A     R++     DD  +    S+  + G   +  
Sbjct: 542 RLWDAASGAQIGTLTGHTGYVTSLAFSPDGRELVTASRDDTARLWDVSVHRQLGAALTGG 601

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRY----------LTPSRDQILFEPRFSPNQQKVA 227
                SV        L     DG    +                  +   RFSP+ + +A
Sbjct: 602 SGPVGSVSFSPDGRRLATAHADGVARVWEVAATPPRSVALTGHTGAVMVARFSPDGRTLA 661

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            A  D      V L D         +           F ++GK    S        +   
Sbjct: 662 TAGEDG----TVRLWDAASREQIGTLSGHEGRTFVLAFGADGKTLFAS---GGDNVVRQW 714

Query: 288 DLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---S 342
           D+++     ++        I    SPD   ++  +   G  +L+    +    +++    
Sbjct: 715 DVRTGRRTGISMAGHAKEVIHMVPSPDGRTLL--TSAAGTTRLW----DTGTGRQLGAAL 768

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           +  E  +    +SP G  +A T        + V  +      +L     + A  +SP G+
Sbjct: 769 RGAEDPFVAVAFSPDGRTLAATDSHNRLVLLDVATRKQVGASMLGHTGPVYAVAFSPDGK 828

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           ++        D   +L+ +         I  P    D  
Sbjct: 829 TVA---TAGEDRSVRLWDV----ETHRQIGRPINGHDGA 860



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 68/190 (35%), Gaps = 13/190 (6%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      +++ +FS +G+  +++   D  + ++    +      LT       SA++SPD
Sbjct: 297 LLGHTGGVMSAQFSPDGRS-VVTAGLDGTVRLWDRSSRKQIGSPLTEPAERYTSAAFSPD 355

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-- 370
              +V  S   G  +L+ +         ++       +   +S  G  +      G    
Sbjct: 356 GGLLVTTSL-SGSVRLWDLARRRPLGSPLT-GHTGWVYTAAFSHDGRRLVTAGEDGTARL 413

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           + +   +++G    +LV    + +  +SP  R L      + +   +L+    + R    
Sbjct: 414 WDVATHRQEG----VLVRRGRVISAAFSPDDRLLATVGDAEDEGVIQLW----DTRTRRR 465

Query: 431 INTPAYASDP 440
           I       + 
Sbjct: 466 IGGALKGRNG 475


>gi|307151561|ref|YP_003886945.1| periplasmic component of the Tol biopolymer transporter-like
           protein [Cyanothece sp. PCC 7822]
 gi|306981789|gb|ADN13670.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Cyanothece sp. PCC 7822]
          Length = 169

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 11/137 (8%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI------ 305
           R  N  +  L P+ SS  +  +    ++ + D+Y  D Q     +L N   +N       
Sbjct: 35  RSLNSFASELTPQISS--RFIVFVSDRNGSQDVYLYDAQ---IRQLVNLPGLNSLDEVTS 89

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             S S D   IVF++ R+G+  +++       ++ ++    A   +P  S  G  IAF  
Sbjct: 90  HPSISEDGRYIVFQASRQGRTGIFIYDRQTEQKRNLTASLPAEVRNPTISADGTKIAFEV 149

Query: 366 FSGEKFAIGVMKKDGSQ 382
               ++ I V  + G Q
Sbjct: 150 AKDGQWDILVYDRSGQQ 166



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 50/129 (38%), Gaps = 12/129 (9%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-----PV 353
           N+    ++   S  S  IVF SDR G + +Y+  +     +++      +  D     P 
Sbjct: 38  NSFASELTPQIS--SRFIVFVSDRNGSQDVYLYDA---QIRQLVNLPGLNSLDEVTSHPS 92

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKD 411
            S  G  I F      +  I +  +   Q+R L     + ++ PT S  G  + F   KD
Sbjct: 93  ISEDGRYIVFQASRQGRTGIFIYDRQTEQKRNLTASLPAEVRNPTISADGTKIAFEVAKD 152

Query: 412 GDTGSKLYS 420
           G     +Y 
Sbjct: 153 GQWDILVYD 161



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 6/126 (4%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRA 272
             P+ S   + + + + D      VYL D +I +     G  +   +   P  S +G+  
Sbjct: 44  LTPQIS--SRFIVFVS-DRNGSQDVYLYDAQIRQLVNLPGLNSLDEVTSHPSISEDGRYI 100

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVM 331
           +    +     I+  D Q+     LT +      + + S D ++I FE  ++G+  + V 
Sbjct: 101 VFQASRQGRTGIFIYDRQTEQKRNLTASLPAEVRNPTISADGTKIAFEVAKDGQWDILVY 160

Query: 332 QSNGSD 337
             +G  
Sbjct: 161 DRSGQQ 166



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 11/122 (9%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYL----TPSRDQILFEPRFSPNQQKVAYATYD 232
           I+FVS+   S        V   D    + +      S D++   P  S + + + +    
Sbjct: 53  IVFVSDRNGSQD------VYLYDAQIRQLVNLPGLNSLDEVTSHPSISEDGRYIVFQASR 106

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 +++ D + ++      +  + +  P  S++G +    V KD   DI   D    
Sbjct: 107 QGRT-GIFIYDRQTEQKRNLTASLPAEVRNPTISADGTKIAFEVAKDGQWDILVYDRSGQ 165

Query: 293 AT 294
             
Sbjct: 166 QI 167



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 39/126 (30%), Gaps = 9/126 (7%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S   G  +L     +   +   S +  AS   P  S     I F         + +    
Sbjct: 17  SGCTGYPRLLNFPFDPGGR---SLNSFASELTPQIS--SRFIVFVSDRNGSQDVYLYDAQ 71

Query: 380 GSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
             Q   L      D     P+ S  GR ++F   + G TG  +Y      +     + PA
Sbjct: 72  IRQLVNLPGLNSLDEVTSHPSISEDGRYIVFQASRQGRTGIFIYDRQTEQKRNLTASLPA 131

Query: 436 YASDPQ 441
              +P 
Sbjct: 132 EVRNPT 137


>gi|225874343|ref|YP_002755802.1| peptidase, S9A/B/C families, catalytic domain protein
           [Acidobacterium capsulatum ATCC 51196]
 gi|225792140|gb|ACO32230.1| peptidase, S9A/B/C families, catalytic domain protein
           [Acidobacterium capsulatum ATCC 51196]
          Length = 699

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 79/250 (31%), Gaps = 67/250 (26%)

Query: 261 LAPRFSSNGKRALISVQ----KDEAMDIYSVDLQSNATERLTNTLFINI-------SASY 309
             P  S +GK+ L++V     K     ++ +D+ +N   +LT +   +         A++
Sbjct: 50  SHPLLSPDGKQVLVAVNDTTAKGGKSHLWLIDIATNTARQLTQSPANDAKDTRGEFDAAW 109

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----------SQDKEA------------ 347
            PD   ++F + R    QL+ +  NG +              SQ+ +A            
Sbjct: 110 MPDGRSVLFLAHRGDTTQLFRLPMNGGEAHAFDLKVLPAVDASQEPDAIPPGLHSKAQKP 169

Query: 348 -----SYFDPVWSPQGDLIA----------------------FTKFSGEKFAIGVMKKDG 380
                       SP G LIA                      +   +     + ++    
Sbjct: 170 TPLPIGVSSFSVSPDGKLIAITALDPQTPGEKKQKQEKADAVWVDHNPHGTRLYLLDPVS 229

Query: 381 SQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDG----DTGSKLYSIDLN--GRNETLINT 433
            +        N++   WS SG   + F    +G          + ++++     E L   
Sbjct: 230 GKLTATAVPPNVRGVAWSHSGSQLVAFCSGMNGLGELHPAGSAWRLNISDPAHPEKLSAV 289

Query: 434 PAYASDPQWV 443
           PA  S   W 
Sbjct: 290 PATVSGGAWS 299



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 80/302 (26%), Gaps = 72/302 (23%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL------FEPRFSPNQ 223
             D    ++ V+++   G  K+ L ++D      R LT S           F+  + P+ 
Sbjct: 55  SPDGKQVLVAVNDTTAKG-GKSHLWLIDIATNTARQLTQSPANDAKDTRGEFDAAWMPDG 113

Query: 224 QKVAYATYDDE---------DILRVYLMDTRI-----------------DRAPKRIGNFR 257
           + V +  +  +         +    +  D ++                     ++     
Sbjct: 114 RSVLFLAHRGDTTQLFRLPMNGGEAHAFDLKVLPAVDASQEPDAIPPGLHSKAQKPTPLP 173

Query: 258 SMILAPRFSSNGKRALISVQKDEAM----------------------DIYSVDLQSNATE 295
             + +   S +GK   I+    +                         +Y +D  S    
Sbjct: 174 IGVSSFSVSPDGKLIAITALDPQTPGEKKQKQEKADAVWVDHNPHGTRLYLLDPVSGKLT 233

Query: 296 RLTNTLFINISASYSPDSSQ-IVFESDREGKEQL------YVMQSNGSDQKRISQDKEAS 348
             T         ++S   SQ + F S   G  +L      + +  +            A+
Sbjct: 234 A-TAVPPNVRGVAWSHSGSQLVAFCSGMNGLGELHPAGSAWRLNISDPAHPEKLSAVPAT 292

Query: 349 YFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVEDSN----LQAPTWSP 399
                WS       F   S          + V+       + L            P  SP
Sbjct: 293 VSGGAWSWHDRRFYFLAQSQANTPPGYSDLYVLHFATHAVKDLTASFQGSIGYGNPIASP 352

Query: 400 SG 401
           +G
Sbjct: 353 AG 354


>gi|255007751|ref|ZP_05279877.1| putative cytochrome c binding protein [Bacteroides fragilis 3_1_12]
 gi|313145453|ref|ZP_07807646.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313134220|gb|EFR51580.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 478

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 63/414 (15%), Positives = 127/414 (30%), Gaps = 85/414 (20%)

Query: 43  ANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
               PV+IA   F+  +E     +E+         V  +            P+ I   + 
Sbjct: 42  GVTFPVNIAPPNFIIKEEADVFQTEI--------GVEKVTD---ILYTSKQPEVIIPSKA 90

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI 162
           W  L         + K     + +   L                    W + A  I+D +
Sbjct: 91  WKKL---------LQKAAGKEIFIRITLL---------------KDGKWTRFAD-ITDTV 125

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
              +         R+L+    + + +      + + +   I        Q +    F+ N
Sbjct: 126 SNEMIDP--YLVYRLLYPGYELWNEMGIYQRNLTNYEETPIAENKAFEKQCINCHTFNRN 183

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---- 278
             +        +    +   + ++++   +    ++      +   G+    S+ +    
Sbjct: 184 SPETMMIHVRGKSGGTLISKNGKVEKVNTKPEGGKNGGTYAAWHPTGRYIAFSMNEIQQF 243

Query: 279 ---DEAMDIYSVDL-------QSNATERLTNT-----LFINISASYSPDSSQIVFESDRE 323
                   I   DL        +     LT++      ++    +++PD   + F     
Sbjct: 244 FHSSGQKPIEVSDLAADLMVYDTQKKTFLTDSLICGDKYMETFPNWTPDGKTLYFCRGNA 303

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFD-----------------PVWSPQGDLIAFTKF 366
            KE++  + S   D  RI  D E+  F                  P  SP G  + FT  
Sbjct: 304 YKEKM-PLDSIRYDLCRIGFDPESGKFGSLECVYKASEQGKSVSFPRVSPDGRYLMFTLS 362

Query: 367 SGEKFAIG-------VMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKK 410
               F+I        ++  D  + RLL E ++    +   WS SG+  +FS K+
Sbjct: 363 DYGNFSIWHPESELCLLTIDTGEIRLLNEVNSDDVESFHTWSSSGKWFVFSSKR 416


>gi|193215915|ref|YP_001997114.1| WD40 domain-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193089392|gb|ACF14667.1| WD-40 repeat protein [Chloroherpeton thalassium ATCC 35110]
          Length = 722

 Score = 78.5 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 75/435 (17%), Positives = 146/435 (33%), Gaps = 82/435 (18%)

Query: 78  VFNLISQDSFKQKITNPDSIP----RFQDWNSL---GAQVLVTGRVIKEG--------KD 122
           +F L++  S    +     +     + QDW  +   G++V  +     +G          
Sbjct: 243 LFQLLAAHSIYPSVATEAGLVSGLLQLQDWQKILMAGSEVY-SVTYSPDGNQIFSGSCDG 301

Query: 123 RLRVEFRLWDVKDRKQI---------------IGKKFFSSPASWRKIAH---------TI 158
            L +   +WD K  + +               +   +    A   KIA           I
Sbjct: 302 LLPISLHIWDAKTGQSMEQFPLDNKNGYSDKALSSPYTGHAAGLEKIALMVDELVKQLKI 361

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQILFE 216
           + ++  ++T  + D   R+  +  S    I K   +L +M   G     L  S D    E
Sbjct: 362 AFEVADAVTSGRQDILGRLDSMGVSSKEQIAKAVKALQIMKAQGLIDEELQKSLDIKAIE 421

Query: 217 PR----------------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                             FSP+  K+   +     +LR++   T        +   +  I
Sbjct: 422 GGMNEYIKSLKYGISSLVFSPDGSKI--VSGSRNGVLRLWNSKTGEG-IGDPLKTRQGEI 478

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               FS +G   ++S   D  + ++++    +  E L    F    A++SPD  ++V  S
Sbjct: 479 HYVAFSPDGD-CIVSGHSDGTLRLWNITTGESIAEPLKGHKFGVTCAAFSPDGDRVVSGS 537

Query: 321 DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                  L +  +   +     S+D + S    V+SP G +IA     G    + +   +
Sbjct: 538 F---DWTLRLWNAKTGEAINDFSKDIKHSVGSVVFSPDGSMIA---TGGLDSTLRLCNAE 591

Query: 380 GSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-- 434
             +   L    + +      +SP G  L+       D+  +L+ +         ++    
Sbjct: 592 TGKSIGLPMYGHKEGINCLAFSPDGSRLV---SGGQDSTLRLWDVKTGQGIGPPLSGHHA 648

Query: 435 -----AYASDPQWVG 444
                A++ D  WV 
Sbjct: 649 GVKCVAFSPDGNWVA 663



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 85/253 (33%), Gaps = 35/253 (13%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                   RLW+ K  + I        P   R+       +I+       GD        
Sbjct: 449 SGSRNGVLRLWNSKTGEGI------GDPLKTRQG------EIHYVAFSPDGDC------- 489

Query: 181 SESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +VSG    +L + +   G +I          +    FSP+  +V   ++D    L  
Sbjct: 490 ---IVSGHSDGTLRLWNITTGESIAEPLKGHKFGVTCAAFSPDGDRVVSGSFDWTLRLWN 546

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT- 298
                 I+   K I +    ++   FS +G              +   + ++  +  L  
Sbjct: 547 AKTGEAINDFSKDIKHSVGSVV---FSPDGSMIA---TGGLDSTLRLCNAETGKSIGLPM 600

Query: 299 --NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             +   IN  A +SPD S++V    ++   +L+ +++       +S    A      +SP
Sbjct: 601 YGHKEGINCLA-FSPDGSRLV-SGGQDSTLRLWDVKTGQGIGPPLS-GHHAGVKCVAFSP 657

Query: 357 QGDLIAFTKFSGE 369
            G+ +A     G 
Sbjct: 658 DGNWVASGSSDGT 670


>gi|226226471|ref|YP_002760577.1| putative peptidase S9C family protein [Gemmatimonas aurantiaca
           T-27]
 gi|226089662|dbj|BAH38107.1| putative peptidase S9C family protein [Gemmatimonas aurantiaca
           T-27]
          Length = 761

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 66/224 (29%), Gaps = 36/224 (16%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQ 277
              ++A+  YD    LR           P R+ +F           R S +G   +    
Sbjct: 52  KADRIAWMVYDQG--LRNVYTAAAPGFRPVRVTSFLDDDGTDLTDVRISDDGGVIVFVRG 109

Query: 278 ----------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
                           +     I++V     A  R+            SPD   ++F  D
Sbjct: 110 SAPNRFGWVANPSHDPRGAERAIWAVRSTGGAAWRVAEGGA----PELSPDGRWVLFTRD 165

Query: 322 RE-------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +           + +   +      I+         P WSP G  IAF         + 
Sbjct: 166 GQIHRARVVRTPGVPITAMDTGGVPLIT--GWGRNGTPRWSPDGARIAFVSDRENHAFVA 223

Query: 375 VMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSK 417
           V          +    +    P+WSP  +SL FSR+     G++
Sbjct: 224 VYDVAKRTVTYVAPGVDCDGTPSWSPDSKSLAFSRRPGVPFGNQ 267



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 61/187 (32%), Gaps = 31/187 (16%)

Query: 218 RFSPNQQKVAYA--------------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R S +   + +               ++D     R          A  R+        AP
Sbjct: 96  RISDDGGVIVFVRGSAPNRFGWVANPSHDPRGAERAIWAVRSTGGAAWRVAEGG----AP 151

Query: 264 RFSSNGKRALISVQKDEAMDIYSV---------DLQSNATERLTNTLFINISASYSPDSS 314
             S +G+  L +  +D  +    V          + +     +T     N +  +SPD +
Sbjct: 152 ELSPDGRWVLFT--RDGQIHRARVVRTPGVPITAMDTGGVPLIT-GWGRNGTPRWSPDGA 208

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +I F SDRE    + V          ++   +     P WSP    +AF++  G  F   
Sbjct: 209 RIAFVSDRENHAFVAVYDVAKRTVTYVAPGVD-CDGTPSWSPDSKSLAFSRRPGVPFGNQ 267

Query: 375 VMKKDGS 381
             +  GS
Sbjct: 268 AQRGQGS 274



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 55/174 (31%), Gaps = 10/174 (5%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            ISDD    +       N      + S      + ++  +   G     +          
Sbjct: 96  RISDDGGVIVFVRGSAPNRFGWVANPSHDPRGAERAIWAVRSTGGAAWRVAEGG-----A 150

Query: 217 PRFSPNQQKVAYATYDDEDILRVY----LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           P  SP+ + V +         RV     +  T +D     +         PR+S +G R 
Sbjct: 151 PELSPDGRWVLFTRDGQIHRARVVRTPGVPITAMDTGGVPLITGWGRNGTPRWSPDGARI 210

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                ++    +   D+       +   +  + + S+SPDS  + F S R G  
Sbjct: 211 AFVSDRENHAFVAVYDVAKRTVTYVAPGVDCDGTPSWSPDSKSLAF-SRRPGVP 263



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 64/204 (31%), Gaps = 37/204 (18%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESD---- 321
            R    V      ++Y+         R+T+ L  + +       S D   IVF       
Sbjct: 54  DRIAWMVYDQGLRNVYTAAAPGFRPVRVTSFLDDDGTDLTDVRISDDGGVIVFVRGSAPN 113

Query: 322 ------------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                       R  +  ++ ++S G    R+++        P  SP G  + FT+  G+
Sbjct: 114 RFGWVANPSHDPRGAERAIWAVRSTGGAAWRVAEGG-----APELSPDGRWVLFTR-DGQ 167

Query: 370 KFAIGVMKK--------DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                V++         D     L+        P WSP G  + F   ++      +Y  
Sbjct: 168 IHRARVVRTPGVPITAMDTGGVPLITGWGRNGTPRWSPDGARIAFVSDRENHAFVAVY-- 225

Query: 422 DLNGRNETLINTPAY-ASDPQWVG 444
           D+  R  T +         P W  
Sbjct: 226 DVAKRTVTYVAPGVDCDGTPSWSP 249



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 81/265 (30%), Gaps = 51/265 (19%)

Query: 217 PRFSPNQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           PR+SP+  ++A+ +  +      VY +  R         +       P +S + K    S
Sbjct: 201 PRWSPDGARIAFVSDRENHAFVAVYDVAKRTVTYVAPGVDCDG---TPSWSPDSKSLAFS 257

Query: 276 VQKD------------------EAMDIYSVDLQSNATERL-------------TNTLFIN 304
            +                         +S  +Q+                   T      
Sbjct: 258 RRPGVPFGNQAQRGQGSIGNPAGPAVNFSAAIQTGNPAGGCGGGGFGGGAPAQTAAANDR 317

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-----ASYFDPVWSPQGD 359
            +   SP      FE       +L +        + + Q+        +  + VW+  GD
Sbjct: 318 NNMRGSPGFYTAAFEG--GHTLKLMIADPVTGRAREVWQNAPRDSVFTTLNNMVWA--GD 373

Query: 360 LIAF-TKFSGEKFA--IGVMKKDGSQERLLVEDS---NLQAPTWSPSG-RSLIFSRKKDG 412
            I F      + F     V    GS  RL   D    +  + ++S  G RSLI++   D 
Sbjct: 374 QIVFPVNVPKDDFERWYAVSVNGGSPVRLTTTDGIIEDATSVSFSRDGGRSLIYTTNADD 433

Query: 413 DTGSKLYSIDLNGRNETLINTPAYA 437
                ++S+ + G     ++T    
Sbjct: 434 IERRHIWSVPVGGGTPRRLSTGDGV 458



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 58/139 (41%), Gaps = 10/139 (7%)

Query: 269 GKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFI---NISASYSPDSSQ-IVFESDR 322
           G + +  V   KD+    Y+V +   +  RLT T  I     S S+S D  + +++ ++ 
Sbjct: 372 GDQIVFPVNVPKDDFERWYAVSVNGGSPVRLTTTDGIIEDATSVSFSRDGGRSLIYTTNA 431

Query: 323 EG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKD 379
           +   +  ++ +   G   +R+S       +    S  G  +A   F  +   ++ ++  +
Sbjct: 432 DDIERRHIWSVPVGGGTPRRLSTGDGVETYPQPLSS-GKQVAVLYFGAKTPASVALVPME 490

Query: 380 GSQERLLVEDSNLQAPTWS 398
           G   R++    +   PT S
Sbjct: 491 GGAPRIIYPTLDKSFPTAS 509


>gi|153874934|ref|ZP_02002955.1| Serine/Threonine protein kinase with WD40 repeats [Beggiatoa sp.
           PS]
 gi|152068602|gb|EDN67045.1| Serine/Threonine protein kinase with WD40 repeats [Beggiatoa sp.
           PS]
          Length = 309

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 19/221 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y     D I++   FSP+ Q +A  + D+     + + +    +    +      + +  
Sbjct: 21  YTLYGHDDIVWSVAFSPDGQLLASGSKDN----TIKVWEVNTRKLLHTLQGHEKDVFSVA 76

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFES 320
           FS NG+    S   D+ + ++ +       E  T     N S     ++SPD S +    
Sbjct: 77  FSPNGRLIA-SGSWDKTVKLWRMS-DGKLLE--TFQEAENSSPVNTVAFSPDGSLLAAG- 131

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + V + N +      +  E + +   +S     +A   +  +   +  M +  
Sbjct: 132 --LWNNTIKVWKVNLAHHLYTLEGHEDAVWSVAFSNDNQRLASASYD-KTIKLWEMNEGT 188

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            Q  L     ++ A  ++P G  L  +     D   KL+ +
Sbjct: 189 LQRTLTKHQDSVFAVAFNPDGHYLASASH---DKTFKLWDV 226



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 85/222 (38%), Gaps = 12/222 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   N++ V + +   + +     ++ +F   FSPN + +A  ++D    ++++ M   
Sbjct: 44  SGSKDNTIKVWEVNTRKLLHTLQGHEKDVFSVAFSPNGRLIASGSWD--KTVKLWRMSDG 101

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 +     S +    FS +G      +  +  + ++ V+L       L        
Sbjct: 102 KLLETFQEAENSSPVNTVAFSPDGSLLAAGLWNN-TIKVWKVNLAH-HLYTLEGHEDAVW 159

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++S D+ ++   S     + + + + N    +R     + S F   ++P G  +A   
Sbjct: 160 SVAFSNDNQRLASASY---DKTIKLWEMNEGTLQRTLTKHQDSVFAVAFNPDGHYLASAS 216

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
              + F +     +  Q    ++     + +  +SP G+ L 
Sbjct: 217 HD-KTFKLW--DVEEGQSLFTMKGFKEVVFSVAFSPDGQFLA 255



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 86/254 (33%), Gaps = 15/254 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTP-SRDQILFEPRFSPNQQK 225
            EK  F+         + SG    ++ +    DG  +           +    FSP+   
Sbjct: 68  HEKDVFSVAFSPNGRLIASGSWDKTVKLWRMSDGKLLETFQEAENSSPVNTVAFSPDGSL 127

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A   +++     + +    +      +      + +  FS++ +R   S   D+ + ++
Sbjct: 128 LAAGLWNN----TIKVWKVNLAHHLYTLEGHEDAVWSVAFSNDNQRLA-SASYDKTIKLW 182

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            ++ +      LT       + +++PD   +   S     +   +            +  
Sbjct: 183 EMN-EGTLQRTLTKHQDSVFAVAFNPDGHYLASASH---DKTFKLWDVEEGQSLFTMKGF 238

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +   F   +SP G  +A        F  G+ KK    E L     ++ +  +SP G+ L 
Sbjct: 239 KEVVFSVAFSPDGQFLATGNDDATIFVWGIEKKQ-LLETLSGHQESVYSVVFSPDGQLLA 297

Query: 406 FSRKKDGDTGSKLY 419
                 GD   KL+
Sbjct: 298 ---SASGDNTIKLW 308



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 70/196 (35%), Gaps = 15/196 (7%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +    + ++    +     ++ +  FS +G+    S  KD  + ++ V+ +      L  
Sbjct: 10  FQTSIQPNQEWYTLYGHDDIVWSVAFSPDGQLLA-SGSKDNTIKVWEVNTR-KLLHTLQG 67

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWS 355
                 S ++SP+   I   S  +   +L+ M    SD K +   +EA    P     +S
Sbjct: 68  HEKDVFSVAFSPNGRLIASGS-WDKTVKLWRM----SDGKLLETFQEAENSSPVNTVAFS 122

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P G L+A          +  +        L   +  + +  +S   + L  +     D  
Sbjct: 123 PDGSLLA-AGLWNNTIKVWKVNLAHHLYTLEGHEDAVWSVAFSNDNQRLASASY---DKT 178

Query: 416 SKLYSIDLNGRNETLI 431
            KL+ ++      TL 
Sbjct: 179 IKLWEMNEGTLQRTLT 194



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 62/168 (36%), Gaps = 12/168 (7%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           +AH +    Y     E   ++      ++ + S     ++ + + +   ++         
Sbjct: 144 LAHHL----YTLEGHEDAVWSVAFSNDNQRLASASYDKTIKLWEMNEGTLQRTLTKHQDS 199

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +F   F+P+   +A A++D        L D    ++   +  F+ ++ +  FS +G+   
Sbjct: 200 VFAVAFNPDGHYLASASHDK----TFKLWDVEEGQSLFTMKGFKEVVFSVAFSPDGQFLA 255

Query: 274 ISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFES 320
                ++   I+   ++     E L+       S  +SPD   +   S
Sbjct: 256 ---TGNDDATIFVWGIEKKQLLETLSGHQESVYSVVFSPDGQLLASAS 300


>gi|227326738|ref|ZP_03830762.1| hypothetical protein PcarcW_05204 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 379

 Score = 78.1 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 54/148 (36%), Gaps = 18/148 (12%)

Query: 279 DEAMDIYSVDLQSNATERLT-----NTLFINISAS-Y---SPDSSQIVF-ESDREGKEQL 328
                            RLT         +      +   SPD S+I F   D  G  QL
Sbjct: 226 SGTATSMPAPPAGVQQRRLTFTHSRRYPGLVNQPRHWLRASPDGSEIAFLMRDEAGVVQL 285

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++  NG + +++++ +        W P G  +AF   +    +I +      +   L  
Sbjct: 286 WMISPNGGEPRQVTRTEHGVQSAFNWHPSGCSLAFVCDN----SIMLCDAKSGELTRLTA 341

Query: 389 DSN----LQAPTWSPSGRSLIFSRKKDG 412
            ++      A  +SP G+ + + R+ DG
Sbjct: 342 RTDSAPSADAVVFSPDGKQIAYMREIDG 369



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 50/126 (39%), Gaps = 11/126 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +Q     R SP+  ++A+   D+  +++++++        +       +  A  +  +G 
Sbjct: 257 NQPRHWLRASPDGSEIAFLMRDEAGVVQLWMISPNGGEPRQVTRTEHGVQSAFNWHPSGC 316

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-----YSPDSSQIVFESDREGK 325
                        I   D +S    RLT     + + S     +SPD  QI +  + +G 
Sbjct: 317 SLAFVCDNS----IMLCDAKSGELTRLTART--DSAPSADAVVFSPDGKQIAYMREIDGF 370

Query: 326 EQLYVM 331
            QL+V+
Sbjct: 371 NQLFVV 376



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 49/129 (37%), Gaps = 12/129 (9%)

Query: 256 FRSMILAPR-F---SSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTL-FINISASY 309
           +  ++  PR +   S +G      ++ +   + ++ +        ++T T   +  + ++
Sbjct: 252 YPGLVNQPRHWLRASPDGSEIAFLMRDEAGVVQLWMISPNGGEPRQVTRTEHGVQSAFNW 311

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS 367
            P    + F  D      + +  +   +  R++   D   S    V+SP G  IA+ +  
Sbjct: 312 HPSGCSLAFVCDNS----IMLCDAKSGELTRLTARTDSAPSADAVVFSPDGKQIAYMREI 367

Query: 368 GEKFAIGVM 376
                + V+
Sbjct: 368 DGFNQLFVV 376


>gi|329928644|ref|ZP_08282498.1| WD40-like protein [Paenibacillus sp. HGF5]
 gi|328937607|gb|EGG34022.1| WD40-like protein [Paenibacillus sp. HGF5]
          Length = 240

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 67/227 (29%), Gaps = 53/227 (23%)

Query: 210 RDQILFEPRFSPNQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           R   + +P  SP    +AY      +  D  R ++                    AP +S
Sbjct: 14  RMHWVNDPVVSPASGAIAYVHKSVSEKHDGYRSHIRLLPAGGDQDIPFTSGEADAAPAWS 73

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------- 317
            +G       +K +   ++ +          T+      +  +SPDSS+++         
Sbjct: 74  PDGSELAFLRKKGDKPQVWIMPANGGEARPATDLKHGVSAFKWSPDSSRLLVRSEAEAAE 133

Query: 318 -------------------------FESDREG-----KEQLYVMQSNGSDQKRISQDKEA 347
                                    +++D  G     +  LY++     + K I+ + + 
Sbjct: 134 STESEEKDKDDKHKLPEEKIINRIKYKADGPGLWNERRHHLYIVNPATEECKPIT-EGDF 192

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKF----------AIGVMKKDGSQER 384
             +   WSP G  IA++     +            + VM        
Sbjct: 193 DVYAFAWSPDGGSIAYSSTLATEHFTNPDLRLTNDVFVMDLSSGSVT 239


>gi|134077578|emb|CAK96722.1| unnamed protein product [Aspergillus niger]
          Length = 772

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 86/243 (35%), Gaps = 18/243 (7%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                    ++    FSPN + +   + D+    +V L D         +      +   
Sbjct: 440 HTTLKGHSGLVECVSFSPNGKTIGSGSLDN----QVRLWDANRGITTFVLNGHSDRVNTI 495

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G+    S  +D+ + ++    +      L        +  +SPD S +  ES   
Sbjct: 496 VFSPDGRLLA-SGSRDKTVRLWDT-TKGTMQVELNGHSGPVNTIRFSPDGSLVASESL-N 552

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  +L+   S   +  RIS D         +SP   ++AF         + ++       
Sbjct: 553 GDYKLW--HSATGNIHRISNDTYRHLTAVEFSPDSRMVAFGTHDAG---LRLLNNATGTF 607

Query: 384 RLL--VEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKLYSIDLNGRNETLINTPAYAS 438
           + L       + + T+SP    L    ++D    DT + +    L+G  E  IN  A++ 
Sbjct: 608 QTLRGTSAEKVNSMTFSPDESILACVVERDITLWDTTTCMMCSTLSGHRER-INIMAFSP 666

Query: 439 DPQ 441
           D  
Sbjct: 667 DGA 669



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 60/355 (16%), Positives = 111/355 (31%), Gaps = 62/355 (17%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNS-LGAQVLV-------TGRVIKEGKDRLRV 126
            S +   +S     + I +     + + W++  G    V          ++     RL  
Sbjct: 446 HSGLVECVSFSPNGKTIGSGSLDNQVRLWDANRGITTFVLNGHSDRVNTIVFSPDGRLLA 505

Query: 127 E------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                   RLWD       +     S P +                      F+     V
Sbjct: 506 SGSRDKTVRLWDTTKGTMQVELNGHSGPVN-------------------TIRFSPDGSLV 546

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +   ++G  K    +      NI  ++    + L    FSP+ + VA+ T+D      + 
Sbjct: 547 ASESLNGDYK----LWHSATGNIHRISNDTYRHLTAVEFSPDSRMVAFGTHDAG----LR 598

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATER 296
           L++          G     + +  FS +       V++D    +          S   ER
Sbjct: 599 LLNNATGTFQTLRGTSAEKVNSMTFSPDESILACVVERDITLWDTTTCMMCSTLSGHRER 658

Query: 297 LTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                 INI A +SPD + +    SDR     + + Q+      +I            +S
Sbjct: 659 ------INIMA-FSPDGAVVASGSSDRT----VRLWQTGTGIMMKILAGHSKPVNAVAFS 707

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSR 408
           P G ++A      +   + +        + L      N  + T+SP GR + +  
Sbjct: 708 PNGTMMA---SGSDDRTVRLWDVSTGAAQTLKGYWGKNCNSLTFSPDGRLVAYPS 759


>gi|83590910|ref|YP_430919.1| copper amine oxidase-like [Moorella thermoacetica ATCC 39073]
 gi|83573824|gb|ABC20376.1| Copper amine oxidase-like protein [Moorella thermoacetica ATCC
           39073]
          Length = 763

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 52/311 (16%), Positives = 102/311 (32%), Gaps = 35/311 (11%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T               + V+    N L ++  DG+       ++D  +    +SP+ Q +
Sbjct: 147 TPPPAVPERVYAAPFPARVAFTANNHLWLL--DGSQAGAGPVTKDGAVQILGWSPDGQWL 204

Query: 227 AYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           AY  ++       + YL   R D +     + R ++    +S        S Q       
Sbjct: 205 AYLQWETSEFRAGKPYLWVVRADGSGAFQVDQRPVLAKASWSPVASILAYSTQGPGGGYA 264

Query: 285 YSVDL-----QSNATER--LTNTLFINIS-ASYSPDSSQIVFESDREGKE--QLYVMQSN 334
             ++L     +S       L       +   +++PD   +     R   E  ++  +   
Sbjct: 265 PDMNLKLAAIESGQARVTTLIPDKGELVEDFAWAPDGQSLAVSLPRTQDEPLRIDRLTLK 324

Query: 335 GSDQKRISQDKEAS---------YFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKD 379
           G     ++  +  +          +   WSP G  +A+           +   + V+  +
Sbjct: 325 GERSNILTLGEAGTPIGEVYPSFAYGFSWSPGGRYLAYHLHPNSASLPADAVDLQVLDLE 384

Query: 380 --GSQERLLVEDSNLQAPTWSPSGRSLIFSR--KKDGDTGSKLYSIDL--NGRNETLINT 433
             G    L V  +      WSP G  L + R   +D   G +L  +DL   G++     T
Sbjct: 385 QPGKPLDLGVTLNYSGWLAWSPDGSRLAYIRGGGRDATIGKRLTIVDLKAGGKSTDYGQT 444

Query: 434 PAYASDPQWVG 444
               + P W+ 
Sbjct: 445 GQVDTMPVWLP 455



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 97/297 (32%), Gaps = 47/297 (15%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL------RVYL 241
             K  L V+  DG+    +      +L +  +SP    +AY+T             ++  
Sbjct: 216 AGKPYLWVVRADGSGAFQVDQR--PVLAKASWSPVASILAYSTQGPGGGYAPDMNLKLAA 273

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTN 299
           +++   R    I +   ++    ++ +G+   +S+   +DE + I  + L+   +  LT 
Sbjct: 274 IESGQARVTTLIPDKGELVEDFAWAPDGQSLAVSLPRTQDEPLRIDRLTLKGERSNILTL 333

Query: 300 T----------LFINISASYSPDSSQIVF------ESDREGKEQLYVMQSNGSDQKRISQ 343
                             S+SP    + +       S       L V+      +     
Sbjct: 334 GEAGTPIGEVYPSFAYGFSWSPGGRYLAYHLHPNSASLPADAVDLQVLDLEQPGKPLDLG 393

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIG----VMKK-DGSQERLLVEDSNLQ-APTW 397
                     WSP G  +A+ +  G    IG    ++    G +     +   +   P W
Sbjct: 394 VTLNYSGWLAWSPDGSRLAYIRGGGRDATIGKRLTIVDLKAGGKSTDYGQTGQVDTMPVW 453

Query: 398 SP--SGRSL--------IFSRKKDGD-----TGSKLYSIDLNGRNETLINTPAYASD 439
            P      L         +   +  D      G +++   L+G+   + + PA  +D
Sbjct: 454 LPAADSGVLYCRGPENKYWEGNRQNDARVLVPGQRIWWQKLDGKAVPVTSGPAGTAD 510



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 78/248 (31%), Gaps = 40/248 (16%)

Query: 218 RFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +SP  + +AY  + +      D + + ++D      P  +G   +      +S +G R 
Sbjct: 352 SWSPGGRYLAYHLHPNSASLPADAVDLQVLDLEQPGKPLDLGVTLNYSGWLAWSPDGSRL 411

Query: 273 LISVQKDEAMDIY----SVDL-QSNATERLTNTLFINISASYSPDSSQIV---------- 317
                      I      VDL     +     T  ++    + P +   V          
Sbjct: 412 AYIRGGGRDATIGKRLTIVDLKAGGKSTDYGQTGQVDTMPVWLPAADSGVLYCRGPENKY 471

Query: 318 FESDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +E +R+         ++++  + +G      S     + + P  SP G  + + +     
Sbjct: 472 WEGNRQNDARVLVPGQRIWWQKLDGKAVPVTSGPAGTADYYPSVSPDGQNLTYLRLDRRD 531

Query: 371 F-AIGVMKKDGSQERLLVED-------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             ++      G     LV +            P W     S+ +   +      K+   D
Sbjct: 532 SGSLYRQPLAGGPAVELVRNLNGSPGYYGNYYPAWI----SIYYL-DQTTRVSGKIVVSD 586

Query: 423 LNGRNETL 430
           + GR+  L
Sbjct: 587 VEGRHYEL 594



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 23/79 (29%), Gaps = 5/79 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +     DG  +   +       + P  SP+ Q + Y   D  D   +Y        A +
Sbjct: 488 RIWWQKLDGKAVPVTSGPAGTADYYPSVSPDGQNLTYLRLDRRDSGSLYRQPLAGGPAVE 547

Query: 252 RIGNFRSM-----ILAPRF 265
            + N            P +
Sbjct: 548 LVRNLNGSPGYYGNYYPAW 566



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 38/107 (35%), Gaps = 7/107 (6%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           I+    A       +P    +AFT  +     + ++    +    + +D  +Q   WSP 
Sbjct: 145 ITTPPPAVPERVYAAPFPARVAFTANN----HLWLLDGSQAGAGPVTKDGAVQILGWSPD 200

Query: 401 GRSLIFSRKKDGDTG---SKLYSIDLNGRNETLINTPAYASDPQWVG 444
           G+ L + + +  +       L+ +  +G     ++     +   W  
Sbjct: 201 GQWLAYLQWETSEFRAGKPYLWVVRADGSGAFQVDQRPVLAKASWSP 247


>gi|120597278|ref|YP_961852.1| peptidase S9 prolyl oligopeptidase [Shewanella sp. W3-18-1]
 gi|146294577|ref|YP_001185001.1| peptidase S9 prolyl oligopeptidase [Shewanella putrefaciens CN-32]
 gi|120557371|gb|ABM23298.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sp. W3-18-1]
 gi|145566267|gb|ABP77202.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella putrefaciens CN-32]
          Length = 675

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 100/317 (31%), Gaps = 68/317 (21%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVYLMDTR 245
                 L   D +G N R +T  +   + EP FSP+ + +A+ +  +ED   ++YL+   
Sbjct: 61  DKGSTQLWRFDGEGKNNRAITA-KGLKVREPVFSPDGKTLAFVSERNEDDAGQIYLLPMD 119

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALI------------------------------- 274
                +R+ +  + +   ++   GK                                   
Sbjct: 120 GPGEAQRLTDIPTGVNGIKW--VGKHLYFISNIFPNQKWDEMKTQLKTDKDNKVSARQWN 177

Query: 275 ---------SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQI 316
                     + +     ++ +       E +T  L   +             SP+   I
Sbjct: 178 ALPYAQFDHWLDERRQAHVFRIPALGGEVEAVTQPLGYEL-PRSSQSSSSYDISPNERLI 236

Query: 317 VFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            F +            +++        + I+ + +A+  +P +SP G  +AFT+     F
Sbjct: 237 AFSAYGSDNRVDPKLDIFLATIGSGKAENITPENQAADVNPNFSPNGKTLAFTRQKIPGF 296

Query: 372 -----AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + ++  D  +   L    D ++    W+P  +   F    D    S++Y ID  
Sbjct: 297 YADTARLMLLDIDSRKLNTLTPEWDRSVSQFNWTPDSKG--FYAAIDDAATSRIYHIDAK 354

Query: 425 GRNETLINTPAYASDPQ 441
                 I        P 
Sbjct: 355 NGKVKAITEATDFGQPA 371



 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 96/296 (32%), Gaps = 72/296 (24%)

Query: 217 PRFSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  SP+ + +      Y   +D+   +++  D    +  + I      +  P FS +GK 
Sbjct: 40  PVVSPSGEHIIAPVTEYDLKEDKGSTQLWRFDGE-GKNNRAITAKGLKVREPVFSPDGKT 98

Query: 272 ALISVQK--DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-------- 320
                ++  D+A  IY + +      +RLT+         +      + F S        
Sbjct: 99  LAFVSERNEDDAGQIYLLPMDGPGEAQRLTDIPTGVNGIKWV--GKHLYFISNIFPNQKW 156

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQDKEA- 347
                                           D   +  ++ + + G + + ++Q     
Sbjct: 157 DEMKTQLKTDKDNKVSARQWNALPYAQFDHWLDERRQAHVFRIPALGGEVEAVTQPLGYE 216

Query: 348 ------SYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLV--EDSNLQA 394
                 S      SP   LIAF+ +  +        I +      +   +     +    
Sbjct: 217 LPRSSQSSSSYDISPNERLIAFSAYGSDNRVDPKLDIFLATIGSGKAENITPENQAADVN 276

Query: 395 PTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLINTPAYASDPQ---WVG 444
           P +SP+G++L F+R+K        ++L  +D++ R    + TP +        W  
Sbjct: 277 PNFSPNGKTLAFTRQKIPGFYADTARLMLLDIDSRKLNTL-TPEWDRSVSQFNWTP 331



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 61/177 (34%), Gaps = 14/177 (7%)

Query: 266 SSNGKRALISV-----QKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFE 319
           S N +    S      + D  +DI+   + S   E +T      +++ ++SP+   + F 
Sbjct: 230 SPNERLIAFSAYGSDNRVDPKLDIFLATIGSGKAENITPENQAADVNPNFSPNGKTLAFT 289

Query: 320 SDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             +         +L ++  +      ++ + + S     W+P                I 
Sbjct: 290 RQKIPGFYADTARLMLLDIDSRKLNTLTPEWDRSVSQFNWTPDSKGFYAAIDDAATSRIY 349

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETL 430
            +     + + + E ++   P     G  +     +     ++L SI+  NG+   L
Sbjct: 350 HIDAKNGKVKAITEATDFGQPAIGKDGELIA--TNESFLHPARLVSINPRNGKTVRL 404



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 65/154 (42%), Gaps = 12/154 (7%)

Query: 219 FSPNQQKVAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            SPN++ +A++ Y  ++     L ++L      +A       ++  + P FS NGK    
Sbjct: 229 ISPNERLIAFSAYGSDNRVDPKLDIFLATIGSGKAENITPENQAADVNPNFSPNGKTLAF 288

Query: 275 SVQKD-----EAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQL 328
           + QK      +   +  +D+ S     LT     ++S  +++PDS       D     ++
Sbjct: 289 TRQKIPGFYADTARLMLLDIDSRKLNTLTPEWDRSVSQFNWTPDSKGFYAAIDDAATSRI 348

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           Y + +     K I++  +  +  P     G+LIA
Sbjct: 349 YHIDAKNGKVKAITEATD--FGQPAIGKDGELIA 380



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 9/104 (8%)

Query: 350 FDPVWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGR 402
             PV SP G+ I         K       +     +G   R +      ++ P +SP G+
Sbjct: 38  GSPVVSPSGEHIIAPVTEYDLKEDKGSTQLWRFDGEGKNNRAITAKGLKVREPVFSPDGK 97

Query: 403 SLIFSRKKDGDTGSKLYS--IDLNGRNETLINTPAYASDPQWVG 444
           +L F  +++ D   ++Y   +D  G  + L + P   +  +WVG
Sbjct: 98  TLAFVSERNEDDAGQIYLLPMDGPGEAQRLTDIPTGVNGIKWVG 141



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 46/116 (39%), Gaps = 12/116 (10%)

Query: 260 ILAPRFSSNGKRAL-----ISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +P  S +G+  +       +++D  +  ++  D +      +T          +SPD 
Sbjct: 37  IGSPVVSPSGEHIIAPVTEYDLKEDKGSTQLWRFDGEGKNNRAITAKGLKVREPVFSPDG 96

Query: 314 SQIVFESDR--EGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             + F S+R  +   Q+Y++  +G  + +R++ D         W   G  + F   
Sbjct: 97  KTLAFVSERNEDDAGQIYLLPMDGPGEAQRLT-DIPTGVNGIKWV--GKHLYFISN 149



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 51/168 (30%), Gaps = 7/168 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            + S++ V   +   L  +         +TP        P FSPN + +A+         
Sbjct: 240 AYGSDNRVDPKLDIFLATIGS--GKAENITPENQAADVNPNFSPNGKTLAFTRQKIPGFY 297

Query: 238 ----RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               R+ L+D    +       +   +    ++ + K    ++       IY +D ++  
Sbjct: 298 ADTARLMLLDIDSRKLNTLTPEWDRSVSQFNWTPDSKGFYAAIDDAATSRIYHIDAKNGK 357

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            + +T         +   D   I          +L  +        R+
Sbjct: 358 VKAITEATDF-GQPAIGKDGELIATNESFLHPARLVSINPRNGKTVRL 404


>gi|325917257|ref|ZP_08179481.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325536552|gb|EGD08324.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 791

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 87/214 (40%), Gaps = 17/214 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATE---RLT 298
            + +RA +   +      A  +S +G+   + ++  +  D +   VDL +   +   RL+
Sbjct: 322 LKGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDLDNAKLQSRHRLS 381

Query: 299 NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +  +IN   +   + PD+  +   S+  G  QLY ++ NG  ++R     +     PV +
Sbjct: 382 DGAWINWDFNDFGWLPDNRTLWLLSEESGYSQLYTVEGNGKPRQR--TRGKWEVSMPVPN 439

Query: 356 PQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G  + F         + +  +     Q   +   + ++  + SP+G+ L+  R     
Sbjct: 440 ADGSGMYFLCNQKWPGDYEVCKLDLRTDQLTEVTVLNGVEGFSLSPNGQQLL-VRYSGAY 498

Query: 414 TGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
              +L  +   G   T++    TPA+ +   W+ 
Sbjct: 499 LPPQLAVVPAAGGQATVLTDTRTPAFKAQ-TWIA 531



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 56/393 (14%), Positives = 112/393 (28%), Gaps = 85/393 (21%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           G       RV    +  L      +D   ++ +  +         R  A T        +
Sbjct: 70  GIDGAAAERVADTARAGLDAANPSYDATRQRMLFARNGDIFLRDLRSGALT-------QL 122

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN---- 222
           T    +  SR  F S+        N+      DG   +      ++   +P  +P     
Sbjct: 123 T-RSNEVESRPQFASDGGAIWRAGNNWYHWHADGGTAQVAVVKAER---DPNAAPKADVL 178

Query: 223 -QQKVAYATYDDEDILR---------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +Q++A       D  +         V+        A          ++    S +G+  
Sbjct: 179 REQQLATLATLRRDREQRDALRTQEDVWRRADATRAAAPVYLGDEVEVVDSALSPDGRHL 238

Query: 273 LISVQKDEAMD----------------------------------IYSVDLQSNATERLT 298
           L+  Q   A +                                  ++ VD+ + +  +L+
Sbjct: 239 LVVTQAKAADEGQAGKMPKYVTESGYEEFQETRTRVGRNMPVAHTLWLVDVAAGSARQLS 298

Query: 299 NT--LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                 I            +        ++ L      G+   R+  D + S     WS 
Sbjct: 299 FDALPGIATDP--------LAALRKAAKRDAL-----KGNRAVRVESDGDGSGPAVHWSD 345

Query: 357 QGDLIAF--TKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPT----WSPSGRSLIFS 407
            G  +A        +   I  +  D ++ +    L + + +        W P  R+L   
Sbjct: 346 DGRNVAVEIRAVDNKDRWIASVDLDNAKLQSRHRLSDGAWINWDFNDFGWLPDNRTLWLL 405

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            ++ G   S+LY+++ NG+           S P
Sbjct: 406 SEESG--YSQLYTVEGNGKPRQRTRGKWEVSMP 436



 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 81/248 (32%), Gaps = 27/248 (10%)

Query: 130 LWDVKDR--KQIIGKKFFSSP----ASWRKIAHTISDDIYQSITGEK-GDFNSRILFVSE 182
           L DV     +Q+             A+ RK A   +    +++  E  GD +   +  S+
Sbjct: 286 LVDVAAGSARQLSFDALPGIATDPLAALRKAAKRDALKGNRAVRVESDGDGSGPAVHWSD 345

Query: 183 SVVS------GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-------PNQQKVAYA 229
              +       +      +   D  N +  +  R        +        P+ + +   
Sbjct: 346 DGRNVAVEIRAVDNKDRWIASVDLDNAKLQSRHRLSDGAWINWDFNDFGWLPDNRTLWLL 405

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSV 287
           + +        L     +  P++    +  +  P  +++G        +      ++  +
Sbjct: 406 SEESG---YSQLYTVEGNGKPRQRTRGKWEVSMPVPNADGSGMYFLCNQKWPGDYEVCKL 462

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKE 346
           DL+++    +T    +    S SP+  Q++   S      QL V+ + G     ++  + 
Sbjct: 463 DLRTDQLTEVTVLNGVEGF-SLSPNGQQLLVRYSGAYLPPQLAVVPAAGGQATVLTDTRT 521

Query: 347 ASYFDPVW 354
            ++    W
Sbjct: 522 PAFKAQTW 529



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 16/142 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--S 258
           A+  ++ PS DQ      +  + ++V Y    D   +R          A +R+ +     
Sbjct: 31  ADPDWIGPSVDQA----WWQWDGKQVQYLLKRDGSPVRDTYRQGIDGAAAERVADTARAG 86

Query: 259 MILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +  A P + +  +R L +   D    I+  DL+S A  +LT +  +     ++ D   I 
Sbjct: 87  LDAANPSYDATRQRMLFARNGD----IFLRDLRSGALTQLTRSNEVESRPQFASDGGAIW 142

Query: 318 FESDREGKEQLYVMQSNGSDQK 339
               R G    Y   ++G   +
Sbjct: 143 ----RAGNN-WYHWHADGGTAQ 159


>gi|300868223|ref|ZP_07112854.1| WD-repeat protein [Oscillatoria sp. PCC 6506]
 gi|300333747|emb|CBN58038.1| WD-repeat protein [Oscillatoria sp. PCC 6506]
          Length = 867

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 74/217 (34%), Gaps = 19/217 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T   D  ++    +P+   +A  + D          +         + +    + +   S
Sbjct: 666 TVDHDAAVWSVAIAPDGLTLASGSSDKTSK----TWNVATGDLIYNLPDHSDYVYSVAIS 721

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFES-DREG 324
            +GK  + S  KD+ + I  VD+++       +     + S + SPD   +V  S DR  
Sbjct: 722 PDGKTLV-SGSKDKTITI--VDVETGRLINTIDGHSDQVRSVAISPDGKTLVSGSYDRT- 777

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +      +  R              SP G  IA +    +   I  ++  G    
Sbjct: 778 ---IKIWNLATGELIRTLNGHSGEIVSVAISPDGKTIA-SGSKDKTIKIWDLR-SGVLLN 832

Query: 385 LLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            L   SN +    +SP G+++        D   KL+ 
Sbjct: 833 SLTGHSNEVYTVAFSPDGKTIA---SGGKDNTIKLWR 866



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 89/261 (34%), Gaps = 17/261 (6%)

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR-KIAHTISDDI 162
            ++    L TG +I+           +W V       G +  +  + WR  + +  + ++
Sbjct: 609 KTIKIWDLATGNLIRSFDGDSSA---IWSVAFNSN--GTRLAAGTSYWRILLWNLKTGEL 663

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            +++  +   ++  I     ++ SG    +    +    ++ Y  P     ++    SP+
Sbjct: 664 VRTVDHDAAVWSVAIAPDGLTLASGSSDKTSKTWNVATGDLIYNLPDHSDYVYSVAISPD 723

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +   + D      + ++D    R    I      + +   S +GK  + S   D  +
Sbjct: 724 GKTLVSGSKDK----TITIVDVETGRLINTIDGHSDQVRSVAISPDGKTLV-SGSYDRTI 778

Query: 283 DIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            I+  +L +    R L       +S + SPD   I   S     + + +           
Sbjct: 779 KIW--NLATGELIRTLNGHSGEIVSVAISPDGKTIASGSK---DKTIKIWDLRSGVLLNS 833

Query: 342 SQDKEASYFDPVWSPQGDLIA 362
                   +   +SP G  IA
Sbjct: 834 LTGHSNEVYTVAFSPDGKTIA 854



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 82/249 (32%), Gaps = 27/249 (10%)

Query: 198 RDGANIRYLT----PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           +DG N + +T          +    FSP+   +A  + D      + + D       +  
Sbjct: 570 QDGTNWKNVTVKNFAEHSNAVGAVAFSPDGLTIASGSKDK----TIKIWDLATGNLIRSF 625

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
               S I +  F+SNG R            I   +L++    R  +      S + +PD 
Sbjct: 626 DGDSSAIWSVAFNSNGTRLAAGTS---YWRILLWNLKTGELVRTVDHDAAVWSVAIAPDG 682

Query: 314 SQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +    SD+  K           D      D     +    SP G  +           
Sbjct: 683 LTLASGSSDKTSK----TWNVATGDLIYNLPDHSDYVYSVAISPDGKTLVSGSKDKT--- 735

Query: 373 IGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           I ++  +  +    ++  + Q  +   SP G++L+       D   K++++   G  E +
Sbjct: 736 ITIVDVETGRLINTIDGHSDQVRSVAISPDGKTLVSGSY---DRTIKIWNL-ATG--ELI 789

Query: 431 INTPAYASD 439
                ++ +
Sbjct: 790 RTLNGHSGE 798



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 56/183 (30%), Gaps = 32/183 (17%)

Query: 108 AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
           +  + +  +  +G             + DV+  + I            R +A  IS D  
Sbjct: 712 SDYVYSVAISPDGKTLVSGSKDKTITIVDVETGRLI--NTIDGHSDQVRSVA--ISPD-- 765

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                             +++VSG    ++ + +     +          +     SP+ 
Sbjct: 766 -----------------GKTLVSGSYDRTIKIWNLATGELIRTLNGHSGEIVSVAISPDG 808

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +A  + D      + + D R       +    + +    FS +GK    S  KD  + 
Sbjct: 809 KTIASGSKDK----TIKIWDLRSGVLLNSLTGHSNEVYTVAFSPDGKTIA-SGGKDNTIK 863

Query: 284 IYS 286
           ++ 
Sbjct: 864 LWR 866


>gi|298250175|ref|ZP_06973979.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297548179|gb|EFH82046.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 298

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 81/232 (34%), Gaps = 26/232 (11%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           C+ D    ++          +    +SP+ + +A A+ D        + DT   R+   +
Sbjct: 42  CIWDAQTGHLLLTLTGHAAGVENAAWSPDNRFIATASQDT----TARIWDTTTGRSLLTL 97

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SY 309
            +   +     +S    + + +   D    I+  D  +    +L + L  +       ++
Sbjct: 98  THTHPLHGI-AWSPKSHQIV-TACWDTTARIW--DALTG---QLVHPLAGHTQPVNGVAW 150

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD+ QI   SD    +  ++  +      RI        +   WSP    IA T     
Sbjct: 151 SPDNRQIATTSD---DQTTHIWDALTGQSSRILTGHINVVYSVAWSPNSQQIATTSADHT 207

Query: 370 KFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                +      Q         S +++  WSP G  L+ + K   D  ++++
Sbjct: 208 S---RIWDTATGQMLHTFRGHTSLVESAAWSPDGMYLVTASK---DRTARIW 253



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 74/220 (33%), Gaps = 19/220 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           LT +    L    +SP   ++  A +D        + D    +    +      +    +
Sbjct: 95  LTLTHTHPLHGIAWSPKSHQIVTACWDT----TARIWDALTGQLVHPLAGHTQPVNGVAW 150

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREG 324
           S + ++   +   D+   I+  D  +  + R LT  + +  S ++SP+S QI   S  + 
Sbjct: 151 SPDNRQIA-TTSDDQTTHIW--DALTGQSSRILTGHINVVYSVAWSPNSQQIATTS-ADH 206

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE- 383
             +++   +         +   +      WSP G  +             + +    +  
Sbjct: 207 TSRIW--DTATGQMLHTFRGHTSLVESAAWSPDGMYLVTASKDRTA---RIWEAQTGKLC 261

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             L      + +  WS +G  +  +     D   +++ + 
Sbjct: 262 FMLTGHTEGINSVAWSSNGTHIATASH---DQTVRIWKLS 298



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 79/241 (32%), Gaps = 37/241 (15%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           R+WD    + ++               H I+             ++ +    S  +V+  
Sbjct: 84  RIWDTTTGRSLLTLTHTHP-------LHGIA-------------WSPK----SHQIVTAC 119

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              +  + D     + +      Q +    +SP+ +++A  + D       ++ D    +
Sbjct: 120 WDTTARIWDALTGQLVHPLAGHTQPVNGVAWSPDNRQIATTSDDQ----TTHIWDALTGQ 175

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISA 307
           + + +    +++ +  +S N ++   +   D    I+  D  +            +  SA
Sbjct: 176 SSRILTGHINVVYSVAWSPNSQQIA-TTSADHTSRIW--DTATGQMLHTFRGHTSLVESA 232

Query: 308 SYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++SPD   +V  S DR  +    + ++       +            WS  G  IA    
Sbjct: 233 AWSPDGMYLVTASKDRTAR----IWEAQTGKLCFMLTGHTEGINSVAWSSNGTHIATASH 288

Query: 367 S 367
            
Sbjct: 289 D 289



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 62/208 (29%), Gaps = 18/208 (8%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTN 299
           +           + N    I    +S +  R   +   D+       D Q+      LT 
Sbjct: 1   MSQLSRGETILILTNTTGSIWGTTWSPDSLRIATT---DQDAHACIWDAQTGHLLLTLTG 57

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 +A++SPD+  I   + ++   +++      + +  ++           WSP+  
Sbjct: 58  HAAGVENAAWSPDNRFIA-TASQDTTARIW---DTTTGRSLLTLTHTHPLHGIAWSPKSH 113

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            I    +        +      Q    L      +    WSP  R +  +     D  + 
Sbjct: 114 QIVTACWDTTA---RIWDALTGQLVHPLAGHTQPVNGVAWSPDNRQIATTSD---DQTTH 167

Query: 418 LYSIDLNGRNETLINTPAYAS-DPQWVG 444
           ++   L G++  ++           W  
Sbjct: 168 IWDA-LTGQSSRILTGHINVVYSVAWSP 194


>gi|259484458|tpe|CBF80695.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 954

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 85/226 (37%), Gaps = 21/226 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D    +++         +    FSP+ + +A  ++D      V L D  
Sbjct: 712 SGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDK----TVRLWDPA 767

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                + +    + + +  FS +G+    S   D+ + ++  D  + + ++ L       
Sbjct: 768 TGSLQQTLRGHSNWVRSVAFSPDGRLLA-SGSFDKTVRLW--DPATGSLQQTLRGHSDTV 824

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPD   +   S     + + +        ++ +   + +  +  +S  G  I   
Sbjct: 825 RSVAFSPDGRLLASGSF---DKTVRLWDPATGTLQQ-TLIIKGTVTELQFSQDGSYI--- 877

Query: 365 KFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTW-SPSGRSLIF 406
             S    ++ +  + G   S    +  D  +  P W S +GR +++
Sbjct: 878 --STNLGSLNIQSRCGNNLSSSPKMHSDILINGPDWISVNGREVLW 921



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 60/183 (32%), Gaps = 11/183 (6%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             V        D   V L D       + +      +L+  FS +G+    S   D+ + 
Sbjct: 704 NSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLA-SGSFDKTVR 762

Query: 284 IYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++  D  + + ++ L        S ++SPD   +   S     + + +        ++  
Sbjct: 763 LW--DPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSF---DKTVRLWDPATGSLQQTL 817

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSG 401
           +    +     +SP G L+A   F      + +        +  L+    +    +S  G
Sbjct: 818 RGHSDTVRSVAFSPDGRLLASGSFDKT---VRLWDPATGTLQQTLIIKGTVTELQFSQDG 874

Query: 402 RSL 404
             +
Sbjct: 875 SYI 877


>gi|218261446|ref|ZP_03476261.1| hypothetical protein PRABACTJOHN_01927 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224021|gb|EEC96671.1| hypothetical protein PRABACTJOHN_01927 [Parabacteroides johnsonii
           DSM 18315]
          Length = 481

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 51/353 (14%), Positives = 109/353 (30%), Gaps = 67/353 (18%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RL D     ++    +      W +            I   +   +S +++         
Sbjct: 87  RLLDASAGGKLTVGIYIRKEDRWLRYPSFF-------IQVVEDKIDSYLVY-RRIAPGYR 138

Query: 189 IKNSLCVMDR---DGANIRYLTPSRDQILFEPRFS-----PNQQKVAYATYDDEDILRVY 240
           + N + +  R   D     +L             S     P+  ++ +            
Sbjct: 139 MWNRMGIYQRCLEDFTEETFLDNKLTNNNCMNCHSFCMQNPD--RMLFHQRAL-HAGTYL 195

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------DEAMDI 284
           L D  I++   +     S ++ P +  +G+    S                   D   D+
Sbjct: 196 LKDGHIEKLATKTERTISALVYPAWHPSGRYVAFSTNDTKQDFHLSDANRVEVFDNRSDV 255

Query: 285 YSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFES---------DREGKEQLYVMQ 332
              D++ +       L++   +    ++SPD  ++ F S          RE    L  + 
Sbjct: 256 VVYDVEKHEIITSPHLSSEENMETFPAFSPDGRRLYFCSAPACQMPESYREIHYNLQSIA 315

Query: 333 SNGSDQ---KRISQDKEAS-----YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +   +   ++I     A+        P  SP G  + +T      F+I     D     
Sbjct: 316 FDPEKRSFGQKIDTLYNANKERRSAKFPRVSPDGRFLMYTVSDYGNFSIWHKDADLRLLD 375

Query: 385 LLV---------EDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYS--IDLNG 425
           +L             ++++  +WS + R  +FS ++     ++ Y   +D NG
Sbjct: 376 MLTCQTDSLLQVNSDDVESYHSWSSNSRWFVFSSRRGDGLYTRPYICYLDANG 428


>gi|150009113|ref|YP_001303856.1| hypothetical protein BDI_2514 [Parabacteroides distasonis ATCC
           8503]
 gi|149937537|gb|ABR44234.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 489

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 74/486 (15%), Positives = 156/486 (32%), Gaps = 127/486 (26%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSP------VSI--AFTKFVSIDELGGKV 65
           ++++C ++  +            +      +  P      V +  A   F  +D+    +
Sbjct: 3   RLSICWIIGCLLELVACRPEVPTQAEQGETDVFPDYREVTVPVNMAPPNFKLVDQQLQGI 62

Query: 66  SE--------VVSKDLQRSDVFNLISQD----SFKQKITNPDSIPRF----QDWNSLGAQ 109
                     +++ D     VFNL   D    S   +    D    F     DW  +   
Sbjct: 63  IRLKTMNGELIIAAD---HGVFNLPETDWKVLSQDAQGKQIDVTVYFREPQSDWKQMNFP 119

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           + V     ++  D   V  R++                   W ++       IYQ     
Sbjct: 120 IYV----SRDSVDAYLVYRRIF--------------PGYRMWNEMG------IYQRCVEN 155

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT-PSRDQILFEPRFSPNQQKVAY 228
                    +V +S++     N+ C+      N         +Q+LF  R S N   +  
Sbjct: 156 ---------YVEKSILDNQSTNNSCM------NCHAFCERQGEQMLFHQRGSHNGTYLI- 199

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------DEA 281
              D   + ++ L         +R G   S +  P +  +G+    S  +        + 
Sbjct: 200 ---DHRQVKKIAL---------ERDGKPASFVY-PYWHPSGRYVAFSTNETHQDFHLSDE 246

Query: 282 MDIYSVDLQS------NATERLTNTL------FINISASYSPDSSQIVFES--------- 320
             I   D++S         ER+ ++             +++PD + ++F S         
Sbjct: 247 NRIEVYDVESDVLIYDTEKERVFSSPLLASMACYETFPTFTPDGNYLLFCSADSVCMPEN 306

Query: 321 DREGKEQLYVMQSN------GSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFA 372
            R+ +  L  +  +      G+    +   +EA      P  SP G  + +T      F+
Sbjct: 307 YRDVRYNLLRVAFDPKDGSIGTQVDTLYNAREAGRSVKFPRVSPDGKRLLYTVSDYGNFS 366

Query: 373 IG-------VMKKDGSQERLL--VEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSID 422
           I        ++         L  V   ++++  +WS + R  +FS ++     ++ Y + 
Sbjct: 367 IWHKDADLHMLDLSTGAIDSLPEVNSPDVESYHSWSGNSRWFVFSSRRGDGLFTRPYLVH 426

Query: 423 LNGRNE 428
           ++ R +
Sbjct: 427 VDERGQ 432


>gi|307150978|ref|YP_003886362.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306981206|gb|ADN13087.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 821

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 103/297 (34%), Gaps = 39/297 (13%)

Query: 116 VIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           V  +G       +    ++WD++  K++                H  S  +        G
Sbjct: 291 VTPDGKRVISGSMDKTLKVWDLETGKELHSLT-----------GH--SGWVRAVCVTPDG 337

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
                     + V+SG   N+L V + +     +        +     +P+ ++    + 
Sbjct: 338 ----------KRVISGSKDNTLKVWELETGKELHTLTGHSTWVEAVCITPDGKRAISGSG 387

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D+     + + D    +         S + A   + +GKR +IS  +D  + ++  DL++
Sbjct: 388 DN----TLKVWDLETGKELHTFTGHSSWVSAVCVTPDGKR-VISGSEDNTLKVW--DLET 440

Query: 292 NA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 LT       +   +PD  +++  S+ +  + L V +     +        +S  
Sbjct: 441 GKELHTLTGHSSSVTAVCVTPDGKRVISGSE-DKTKNLKVWELETGKELHTLTGHSSSVT 499

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
               +P G  +        K  + V + +  +E   L    S++ A   +P G+ +I
Sbjct: 500 AVCVTPDGKRVISGSEDKTK-NLKVWELETGKELHTLTGHSSSVTAVCVTPDGKRVI 555



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 84/225 (37%), Gaps = 12/225 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +  +SG   N+L V D +     +        +     +P+ ++V   + D+     + +
Sbjct: 380 KRAISGSGDNTLKVWDLETGKELHTFTGHSSWVSAVCVTPDGKRVISGSEDN----TLKV 435

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
            D    +    +    S + A   + +GKR +IS  +D+  ++   +L++      LT  
Sbjct: 436 WDLETGKELHTLTGHSSSVTAVCVTPDGKR-VISGSEDKTKNLKVWELETGKELHTLTGH 494

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                +   +PD  +++  S+ +  + L V +     +        +S      +P G  
Sbjct: 495 SSSVTAVCVTPDGKRVISGSE-DKTKNLKVWELETGKELHTLTGHSSSVTAVCVTPDGKR 553

Query: 361 IAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRS 403
           +           + V + +  +E   L    +++ A   +P G+ 
Sbjct: 554 VISGSKDNT---LKVWELERGKELHTLTGHSNSVSAVCVTPDGKR 595



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 92/259 (35%), Gaps = 17/259 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + ++SG   N+L V +     + +        ++    +P+ ++V   + D      + +
Sbjct: 170 KRIISGSDDNTLKVWELATGKVLHTLTGHSNSVYAVCVTPDGKRVISGSMDK----TLKV 225

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +    + + RS +LA   + +GKR +IS   D+ + ++ ++        L    
Sbjct: 226 WDLETGKELHSLTSHRSRVLAVCVTPDGKR-VISASWDKTLKVWKLE-TGKVLHTLKGHS 283

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +   +PD  +++  S     + L V       +                +P G  +
Sbjct: 284 NSVYAVCVTPDGKRVISGSM---DKTLKVWDLETGKELHSLTGHSGWVRAVCVTPDGKRV 340

Query: 362 AFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                      + V + +  +E   L    + ++A   +P G+  I      GD   K++
Sbjct: 341 ISGSKDNT---LKVWELETGKELHTLTGHSTWVEAVCITPDGKRAI---SGSGDNTLKVW 394

Query: 420 SIDLNGRNETLINTPAYAS 438
            ++      T     ++ S
Sbjct: 395 DLETGKELHTFTGHSSWVS 413



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 83/244 (34%), Gaps = 17/244 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V+SG   N+L V + +     +        +     +P+ ++    ++D      + +
Sbjct: 552 KRVISGSKDNTLKVWELERGKELHTLTGHSNSVSAVCVTPDGKRAISGSWDK----TLKV 607

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +    +    S + A   + +GK  +IS   D  + ++ ++ +      LT   
Sbjct: 608 WDWETGKLLHTLKGHSSGVSAVCVTPDGK-LVISGSWDNTLKVWELE-RGKELHTLTGHS 665

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +   +PD  +++  S     + L V            +   +       +P G  +
Sbjct: 666 KSVSAVCVTPDGKRVISGS---WDKTLKVWDWETGKLLHTLKGHSSWVNAVCVTPDGKRV 722

Query: 362 AFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                      + V   +  +    L     ++ A   +P G+ +I   +   D   K++
Sbjct: 723 ISGSDDNT---LKVWDLERRKLLHTLTGHSKSVSAVCVTPDGKRVISGSR---DNTLKVW 776

Query: 420 SIDL 423
            +D 
Sbjct: 777 ELDT 780



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 73/224 (32%), Gaps = 16/224 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S     +L V + +     +        +     +P+ ++V   + D+     + + + 
Sbjct: 513 GSEDKTKNLKVWELETGKELHTLTGHSSSVTAVCVTPDGKRVISGSKDN----TLKVWEL 568

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +    +    + + A   + +GKR  IS   D+ + ++  D ++             
Sbjct: 569 ERGKELHTLTGHSNSVSAVCVTPDGKR-AISGSWDKTLKVW--DWETGKLLHTLKGHSSG 625

Query: 305 ISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +SA   +PD   ++  S       L V +     +         S      +P G  +  
Sbjct: 626 VSAVCVTPDGKLVISGS---WDNTLKVWELERGKELHTLTGHSKSVSAVCVTPDGKRVIS 682

Query: 364 TKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
             +      + V   +  +    L    S + A   +P G+ +I
Sbjct: 683 GSWDKT---LKVWDWETGKLLHTLKGHSSWVNAVCVTPDGKRVI 723



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 13/190 (6%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + +    S + A   + NGKR  IS   D  + ++ +         LT       +   +
Sbjct: 151 RTLTGHSSSVRAVCVTPNGKRI-ISGSDDNTLKVWEL-ATGKVLHTLTGHSNSVYAVCVT 208

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD  +++  S     + L V       +        +       +P G  +    +    
Sbjct: 209 PDGKRVISGSM---DKTLKVWDLETGKELHSLTSHRSRVLAVCVTPDGKRVISASWDKT- 264

Query: 371 FAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             + V K +  +    L    +++ A   +P G+ +I       D   K++ ++      
Sbjct: 265 --LKVWKLETGKVLHTLKGHSNSVYAVCVTPDGKRVISGSM---DKTLKVWDLETGKELH 319

Query: 429 TLINTPAYAS 438
           +L     +  
Sbjct: 320 SLTGHSGWVR 329


>gi|158338424|ref|YP_001519601.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158308665|gb|ABW30282.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 346

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 92/228 (40%), Gaps = 19/228 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E++ SG     + + +    N+R    + +  +     S + Q +   ++D+    R+ L
Sbjct: 72  ETLASGRYDGKVELWNLRTGNLRQTLQAHEDAISSLTISVDGQTLVSGSWDN----RISL 127

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D +  +    + +    + A   S +GK    +   D+ + ++  DL+S +  ++    
Sbjct: 128 WDLQTGKHLHTLEDAADDVTAIALSPDGKSLA-ASAADKTIRLW--DLKSGSQSQVQKAS 184

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            + +S ++SPD   +     R+G  + +  Q +        +  + +     +SP G L+
Sbjct: 185 TVVLSLAFSPDGQVLA-GGSRDGVVRFW--QRDSLSPSVALEGHQGAVHSVSFSPDGALL 241

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI 405
           A +    +   +  +    SQ +LL       AP     +SP GR L 
Sbjct: 242 A-SGSEDQSMKVWHL----SQGKLLHTLQGHDAPVLSVAFSPDGRKLA 284



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 108/305 (35%), Gaps = 43/305 (14%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
              R   +  LW+++               + R+      D I        G        
Sbjct: 75  ASGRYDGKVELWNLRTG-------------NLRQTLQAHEDAISSLTISVDG-------- 113

Query: 180 VSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
             +++VSG   N + + D + G ++  L  + D +      SP+ + +A +  D      
Sbjct: 114 --QTLVSGSWDNRISLWDLQTGKHLHTLEDAADDVTAI-ALSPDGKSLAASAADK----T 166

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           + L D +     + +    +++L+  FS +G+       +D  +  +  D  S +   L 
Sbjct: 167 IRLWDLKSGSQSQ-VQKASTVVLSLAFSPDGQVLA-GGSRDGVVRFWQRDSLSPSVA-LE 223

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  S S+SPD + +   S+    + + V   +        Q  +A      +SP G
Sbjct: 224 GHQGAVHSVSFSPDGALLASGSE---DQSMKVWHLSQGKLLHTLQGHDAPVLSVAFSPDG 280

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             +A   +      I V      Q    L+    ++Q+  +SP  ++L+       D   
Sbjct: 281 RKLASGSYDRT---IKVWHPVSGQPLKNLVGHTKSVQSIQFSPDSQTLV---SSGSDATV 334

Query: 417 KLYSI 421
           +++ I
Sbjct: 335 RVWPI 339


>gi|170289620|ref|YP_001739858.1| hypothetical protein TRQ2_1847 [Thermotoga sp. RQ2]
 gi|170177123|gb|ACB10175.1| conserved hypothetical protein [Thermotoga sp. RQ2]
          Length = 389

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 96/262 (36%), Gaps = 14/262 (5%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y     E  DF+SR L  S   +SG     L +  ++G  +        +  + PR SP+
Sbjct: 132 YHPALDEYCDFSSRYLVFSSERLSGNRNLFL-IDRQNGELVPMSIYGSSE--YFPRISPD 188

Query: 223 QQKVAYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++ + +      +    Y+ + +   +  + I   R     P +  +    +   +   +
Sbjct: 189 ERYLLFQGSLHGNWNIYYMPLSSDYSKKIQLISRGRYASYNPNW-IDNNTVVYVQEDATS 247

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +   DL +   +  T  L  +   + +  +  IVF   +E    +Y +  +G+    +
Sbjct: 248 NHLVVKDLTTMKEK--TYYLPFDWVFTPAKGNQGIVFVGLKESNFGIYELLPDGTIT--V 303

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSP 399
            +D   + FDP      + + F+      F I        +   L E    +   P +S 
Sbjct: 304 LEDSPYNEFDPDV--FENYLIFSSNRDGVFRIYAKDLVSGKVWCLTENIPYDAFYPAFSE 361

Query: 400 SGRSLIFSRKKDGDTGSKLYSI 421
            G+ + FS    G +   ++ +
Sbjct: 362 DGKLVAFSVYSKG-SEPDIWIV 382



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 92/232 (39%), Gaps = 28/232 (12%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + + +++        ++L+D R +     +  + S    PR S + +  L         +
Sbjct: 145 RYLVFSSERLSGNRNLFLID-RQNGELVPMSIYGSSEYFPRISPDERYLLFQGSLHGNWN 203

Query: 284 IYSVDLQ---SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           IY + L    S   + ++   + + + ++  D++ +V+  +      L V          
Sbjct: 204 IYYMPLSSDYSKKIQLISRGRYASYNPNWI-DNNTVVYVQEDATSNHLVVKD-------- 254

Query: 341 ISQDKEASYFDP---VWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           ++  KE +Y+ P   V++P      I F       F I  +  DG+   +L +    +  
Sbjct: 255 LTTMKEKTYYLPFDWVFTPAKGNQGIVFVGLKESNFGIYELLPDGT-ITVLEDSPYNE-- 311

Query: 396 TWSPS--GRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI-NTPAYASDPQWV 443
            + P      LIFS  +DG    ++Y+ DL +G+   L  N P  A  P + 
Sbjct: 312 -FDPDVFENYLIFSSNRDG--VFRIYAKDLVSGKVWCLTENIPYDAFYPAFS 360


>gi|311746889|ref|ZP_07720674.1| putative peptidase [Algoriphagus sp. PR1]
 gi|311302584|gb|EAZ82740.2| putative peptidase [Algoriphagus sp. PR1]
          Length = 788

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 94/264 (35%), Gaps = 24/264 (9%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK--VAYATYD 232
             + FVS S + GI      V D       +    RD IL +P FSPN +K  +   + D
Sbjct: 294 DTVYFVSTSELPGIKDLPDYVKDY--PEKTWEEKERDVILSQPYFSPNGEKAIINIRSAD 351

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFS-------SNGKRALISVQKDEA 281
           ++D     +  T             + I  P     FS        + K      ++   
Sbjct: 352 NKDRWIAEIDLTTGTLKTLDRQRDEAWIAGPGIGWSFSGGTMGWLPDNKHIYFQSEESGY 411

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQK 339
             +Y +D+ +   + LT+  +       S D+      S     G+   Y M   G  + 
Sbjct: 412 SHLYLLDVTTGEKKALTSGNYEVFDPFLSNDNKSWYLTSSEVGPGERHFYKMPVMGGKKI 471

Query: 340 RISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVM-KKDGSQERLLVEDSNLQ--AP 395
           +++     +  D   SP    +A    +S +   + +   K+G+  + L +  + +  A 
Sbjct: 472 KLTSMTGKN--DVTLSPDEKNLAIIYSYSNQPEELYLQENKEGATPQKLTDGQSEEFKAY 529

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLY 419
            W      + F+ +      ++LY
Sbjct: 530 NWR-DPELIQFTAEDGASVPARLY 552



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 67/175 (38%), Gaps = 19/175 (10%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERL--------TNTLFINISAS---- 308
           P FS NG++A+I+++  +  D +   +DL +   + L             I  S S    
Sbjct: 334 PYFSPNGEKAIINIRSADNKDRWIAEIDLTTGTLKTLDRQRDEAWIAGPGIGWSFSGGTM 393

Query: 309 -YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTK 365
            + PD+  I F+S+  G   LY++     ++K ++       FDP  S       +  ++
Sbjct: 394 GWLPDNKHIYFQSEESGYSHLYLLDVTTGEKKALTS-GNYEVFDPFLSNDNKSWYLTSSE 452

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               +     M   G ++  L   +     T SP  ++L            +LY 
Sbjct: 453 VGPGERHFYKMPVMGGKKIKLTSMTGKNDVTLSPDEKNLAIIYSYSNQPE-ELYL 506



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 82/279 (29%), Gaps = 77/279 (27%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           T  ++ I      SP+ +   +  +D    +   +             +     +   P 
Sbjct: 225 TEGKNPINL--SLSPDGKYATFLYFDRPSNNKSTIVPDYVDASGYTTNLNTRPKVGTEPT 282

Query: 265 -----------------------------------------------------FSSNGKR 271
                                                                FS NG++
Sbjct: 283 KSEVGIYDLSRDTVYFVSTSELPGIKDLPDYVKDYPEKTWEEKERDVILSQPYFSPNGEK 342

Query: 272 ALISVQKDEAMDIYS--VDLQSNATERL--------TNTLFINISAS-----YSPDSSQI 316
           A+I+++  +  D +   +DL +   + L             I  S S     + PD+  I
Sbjct: 343 AIINIRSADNKDRWIAEIDLTTGTLKTLDRQRDEAWIAGPGIGWSFSGGTMGWLPDNKHI 402

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAIG 374
            F+S+  G   LY++     ++K ++       FDP  S       +  ++    +    
Sbjct: 403 YFQSEESGYSHLYLLDVTTGEKKALTS-GNYEVFDPFLSNDNKSWYLTSSEVGPGERHFY 461

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGR--SLIFSRKKD 411
            M   G ++  L   +     T SP  +  ++I+S    
Sbjct: 462 KMPVMGGKKIKLTSMTGKNDVTLSPDEKNLAIIYSYSNQ 500



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 61/206 (29%), Gaps = 31/206 (15%)

Query: 264 RFSSNGKRALI-SVQKDEAMDIYSVDL---QSNATERLTNTLFINISAS--------YSP 311
             S +GK A      +        V      S  T  L     +    +         S 
Sbjct: 234 SLSPDGKYATFLYFDRPSNNKSTIVPDYVDASGYTTNLNTRPKVGTEPTKSEVGIYDLSR 293

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL--IAFTKFSGE 369
           D+   V  S+  G + L     +  ++    ++++     P +SP G+   I       +
Sbjct: 294 DTVYFVSTSELPGIKDLPDYVKDYPEKTWEEKERDVILSQPYFSPNGEKAIINIRSADNK 353

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPT--------------WSPSGRSLIFSRKKDGDTG 415
              I  +       + L    +                   W P  + + F  ++ G   
Sbjct: 354 DRWIAEIDLTTGTLKTLDRQRDEAWIAGPGIGWSFSGGTMGWLPDNKHIYFQSEESG--Y 411

Query: 416 SKLYSIDL-NGRNETLINTPAYASDP 440
           S LY +D+  G  + L +      DP
Sbjct: 412 SHLYLLDVTTGEKKALTSGNYEVFDP 437


>gi|284991866|ref|YP_003410420.1| WD40 repeat, subgroup [Geodermatophilus obscurus DSM 43160]
 gi|284065111|gb|ADB76049.1| WD40 repeat, subgroup [Geodermatophilus obscurus DSM 43160]
          Length = 1357

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 65/378 (17%), Positives = 111/378 (29%), Gaps = 70/378 (18%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTI-SDDIYQ--- 164
             V       L V        +LWD    +          P S   + HT+ +D +     
Sbjct: 934  AVAFSPDGGLVVSATQNGTVQLWDTASGQ----------PYSQPLVGHTMWADGVAFSPD 983

Query: 165  --SITGEKGDFNSRILFVSESVV-------------------------SGIIKNSLCVMD 197
               +     D  +RI  V+E+                           S     ++ + D
Sbjct: 984  GSRVASVSLDQTARIWDVTETSSVSQALAGHTDVVNEVVFSPDGNLLASASADQTVQLWD 1043

Query: 198  -RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGN 255
               G          +  +    FSP+   +A       D   V L D        + +  
Sbjct: 1044 VATGQPTGQPLVGHNDWVNGVAFSPDGDLLA----SGGDDQAVRLWDVATGEPRGEPLTG 1099

Query: 256  FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                +L   FS +    L S  +D  + ++ V       E LT         ++SPD   
Sbjct: 1100 HTDWVLKVAFSPD-AELLASAGQDRTVRLWDVATGGPRGELLTGHTDWVSGVAFSPDGDL 1158

Query: 316  IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S   G + + +      + +         Y  D  +SP G L+A            
Sbjct: 1159 LASAS---GDQTVRLWDVATGEPRGEPLAGHTGYVQDVAFSPDGRLMASGSTDNTVRLWD 1215

Query: 375  VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI--------DLNGR 426
            V       E L    + + +  +SP GR L        D   +L+ +         L G 
Sbjct: 1216 VASGQPHGEPLRGHTNTVLSVAFSPDGRLLA---SVADDRTLRLWDVATGQPHGPSLTG- 1271

Query: 427  NETLINTPAYASDPQWVG 444
            +E  I    ++   +WV 
Sbjct: 1272 HENEIRGVEFSPGGRWVA 1289



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 53/312 (16%), Positives = 108/312 (34%), Gaps = 40/312 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++        V  RLWDV              P       HT  D++        G  
Sbjct: 812  GSLLATAGADHTV--RLWDVATG----------LPWGSPLTGHT--DEVRDVTFSPDGA- 856

Query: 174  NSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                      + +  +  +L + D   G  +       +  +    FSP+   +A A+ D
Sbjct: 857  ---------QLATVGVDRTLRLWDVATGQALGEPLTGHEDEVRGVAFSPDGTLLATASAD 907

Query: 233  DEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                  V L D    +   + +G +   + A  FS +G   ++S  ++  + ++  D  S
Sbjct: 908  R----FVQLWDAVTGQPLGQPLGGYSGPVWAVAFSPDGG-LVVSATQNGTVQLW--DTAS 960

Query: 292  NAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                 + L          ++SPD S++   S  +   +++ +    S  + ++   +   
Sbjct: 961  GQPYSQPLVGHTMWADGVAFSPDGSRVASVSL-DQTARIWDVTETSSVSQALAGHTDV-V 1018

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             + V+SP G+L+A            V     + + L+  +  +    +SP G  L     
Sbjct: 1019 NEVVFSPDGNLLASASADQTVQLWDVATGQPTGQPLVGHNDWVNGVAFSPDGDLLA---S 1075

Query: 410  KDGDTGSKLYSI 421
               D   +L+ +
Sbjct: 1076 GGDDQAVRLWDV 1087



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 14/181 (7%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           R+    + +      +    FS +G+    +   D  + ++  D    A + LT      
Sbjct: 702 RMTHTSQLLSGHTGPVWGVAFSPDGRLLA-TSSGDRTVRLWEADSGRPAGDPLTGHTAAV 760

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAF 363
               +SPD + +       G + L +          +      A  +   +SP G L+A 
Sbjct: 761 RDVVFSPDGALMA---TAGGDQTLRLWDVATRQPHGQPLTGHAAGLWAVAFSPDGSLLA- 816

Query: 364 TKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              +G    + +            L      ++  T+SP G  L        D   +L+ 
Sbjct: 817 --TAGADHTVRLWDVATGLPWGSPLTGHTDEVRDVTFSPDGAQLA---TVGVDRTLRLWD 871

Query: 421 I 421
           +
Sbjct: 872 V 872



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/259 (19%), Positives = 80/259 (30%), Gaps = 37/259 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++  G D   V  RLWDV    +  G+          K+A   S D  + +     D 
Sbjct: 1070 GDLLASGGDDQAV--RLWDVATG-EPRGEPLTGHTDWVLKVA--FSPDA-ELLASAGQDR 1123

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
              R+  V+     G                  L       +    FSP+   +A A+ D 
Sbjct: 1124 TVRLWDVATGGPRGE-----------------LLTGHTDWVSGVAFSPDGDLLASASGDQ 1166

Query: 234  EDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 V L D        + +      +    FS +G+    S   D  + ++  D+ S 
Sbjct: 1167 ----TVRLWDVATGEPRGEPLAGHTGYVQDVAFSPDGRLMA-SGSTDNTVRLW--DVASG 1219

Query: 293  AT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASY 349
                E L       +S ++SPD   +   +D      L +           S    E   
Sbjct: 1220 QPHGEPLRGHTNTVLSVAFSPDGRLLASVAD---DRTLRLWDVATGQPHGPSLTGHENEI 1276

Query: 350  FDPVWSPQGDLIAFTKFSG 368
                +SP G  +A     G
Sbjct: 1277 RGVEFSPGGRWVATGSRDG 1295



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 75/241 (31%), Gaps = 18/241 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L       ++   FSP+ + +A ++    D             A   +    + +    
Sbjct: 708 QLLSGHTGPVWGVAFSPDGRLLATSS---GDRTVRLWEADSGRPAGDPLTGHTAAVRDVV 764

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDR 322
           FS +G    +         +   D+ +     + LT       + ++SPD S +   +  
Sbjct: 765 FSPDG---ALMATAGGDQTLRLWDVATRQPHGQPLTGHAAGLWAVAFSPDGSLLA-TAGA 820

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +   +L+ + + G               D  +SP G  +A            V       
Sbjct: 821 DHTVRLWDV-ATGLPWGSPLTGHTDEVRDVTFSPDGAQLATVGVDRTLRLWDVATGQALG 879

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQ 441
           E L   +  ++   +SP G  L  +     D   +L+   + G     +  P    S P 
Sbjct: 880 EPLTGHEDEVRGVAFSPDGTLLATAS---ADRFVQLWDA-VTG---QPLGQPLGGYSGPV 932

Query: 442 W 442
           W
Sbjct: 933 W 933


>gi|322369869|ref|ZP_08044431.1| prolyl oligopeptidase family protein [Haladaptatus paucihalophilus
           DX253]
 gi|320550205|gb|EFW91857.1| prolyl oligopeptidase family protein [Haladaptatus paucihalophilus
           DX253]
          Length = 601

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 87/268 (32%), Gaps = 14/268 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVYLMD- 243
            G  +  L  +D DG  I  LT   D       ++ +  + A+A+   ++ +  VY+ D 
Sbjct: 78  GGNERQQLFRLDGDGETITPLTAMPDAKHRWGGWNSDGSQFAFASNRRDNAVFDVYVQDR 137

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLF 302
           T      + +      +    +  +  R ++         D+Y +D++S   E +T    
Sbjct: 138 TGTGDDAEMVYEGDGWLSLAGWGPDDDRLVVVESHSSFDRDLYVLDIESGDIEHVTPHEG 197

Query: 303 INI--SASYSPDSSQIVFESDREGKEQLY--VMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  ++ PD   +   +D EG + +Y   +     D + + +    +          
Sbjct: 198 NVRYQGINWGPDGDALYLVTD-EGADTMYLARLDLETYDIELVEEGGSWNVDGCALDEDS 256

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDGD 413
             + +++       + V +  G          NL        ++ P       S      
Sbjct: 257 GRLVYSRNEDGYTELTVGELTGETTIREFPTPNLPHGIAGGVSFGPDAERFAISVT-GSA 315

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQ 441
           + + +Y ++            + A  P 
Sbjct: 316 SATNVYVVETKTGEAERWTDASTAGLPT 343



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 70/201 (34%), Gaps = 10/201 (4%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +R  N RS   A  F   G+R    +       ++ +D      ++ T       
Sbjct: 2   TSYDFERYLNVRSAYGA-SFDPTGERLSFLLNTTGVPQVWQLDGPRAWPQQSTFYDERVT 60

Query: 306 SASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S+SP+  ++ F  D  G   +QL+ +  +G     ++   +A +    W+  G   AF
Sbjct: 61  FVSWSPERDELAFGMDEGGNERQQLFRLDGDGETITPLTAMPDAKHRWGGWNSDGSQFAF 120

Query: 364 T--KFSGEKFAIGVMKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              +     F + V  + G+    E +   D  L    W P    L+   +        L
Sbjct: 121 ASNRRDNAVFDVYVQDRTGTGDDAEMVYEGDGWLSLAGWGPDDDRLV-VVESHSSFDRDL 179

Query: 419 YSIDL-NGRNETLINTPAYAS 438
           Y +D+ +G  E +        
Sbjct: 180 YVLDIESGDIEHVTPHEGNVR 200



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 77/234 (32%), Gaps = 21/234 (8%)

Query: 195 VMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           V   DG       +   D+ +    +SP + ++A+   +  +  +              +
Sbjct: 39  VWQLDGPRAWPQQSTFYDERVTFVSWSPERDELAFGMDEGGNERQQLFRLDGDGETITPL 98

Query: 254 GNFRSMI-LAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNA--TERLTNTLFINISAS 308
                       ++S+G +   +  + +    D+Y  D        E +         A 
Sbjct: 99  TAMPDAKHRWGGWNSDGSQFAFASNRRDNAVFDVYVQDRTGTGDDAEMVYEGDGWLSLAG 158

Query: 309 YSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKF 366
           + PD  ++V   S       LYV+     D + ++  +    Y    W P GD +     
Sbjct: 159 WGPDDDRLVVVESHSSFDRDLYVLDIESGDIEHVTPHEGNVRYQGINWGPDGDALYLVTD 218

Query: 367 SG-EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG-------RSLIFSRKKDG 412
            G +   +  +  +     L+ E       +W+  G         L++SR +DG
Sbjct: 219 EGADTMYLARLDLETYDIELVEEGG-----SWNVDGCALDEDSGRLVYSRNEDG 267


>gi|329940108|ref|ZP_08289390.1| WD-40 repeat-containing protein [Streptomyces griseoaurantiacus M045]
 gi|329300934|gb|EGG44830.1| WD-40 repeat-containing protein [Streptomyces griseoaurantiacus M045]
          Length = 1299

 Score = 78.1 bits (191), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 59/319 (18%), Positives = 110/319 (34%), Gaps = 40/319 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++  G DRL    RLW V   + + G++      +   +A   S D  +++       
Sbjct: 976  GELLAIGTDRL----RLWRVASGRPL-GRELTVPGGAVTAVA--FSPD-GRTLAIAGTTG 1027

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
              R+  V++      +              R LT      +    FSP+ + +A      
Sbjct: 1028 TVRLWDVADETRPVAL-------------GRALTGPASGYVQSVTFSPDGRTLA----TG 1070

Query: 234  EDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             D   V L D      P R+     F+S +L+  FS +G+    +   D  + ++ +  +
Sbjct: 1071 NDDQTVRLWDVTTPGRPTRLPKQSGFKSYVLSVAFSPDGRTLA-AGSADHTVRLWDMRHR 1129

Query: 291  SNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--RISQDK 345
            +        L        S ++SPD   +   S  +    L+ M    + +   R     
Sbjct: 1130 ATPRPLGRPLRKHTDTVYSVAFSPDGRTLAVGS-ADHTVGLWDMSRPAAPRPLGRPLTGP 1188

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQAPTWSPSGRS 403
                +   +SP G  +A        +  GV           L     ++ A ++SP G +
Sbjct: 1189 TNYVYAVAFSPDGRTLAAGSTDHTVWLWGVTDPSSPTVMATLTGPTDHVYAVSFSPKGHT 1248

Query: 404  LIFSRKKDGDTGSKLYSID 422
            L        D   +L++ D
Sbjct: 1249 LA---AGGADHTVRLWATD 1264



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 61/349 (17%), Positives = 114/349 (32%), Gaps = 65/349 (18%)

Query: 130  LWDVKDRKQI--IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL-FVSESVVS 186
            LWDV D   +  +G+    S      +A   S D  +++    GD   R+  F +    +
Sbjct: 775  LWDVNDPGHVRPMGRPLTGSRNYVHAVA--FSPD-GRTLAAGSGDGKVRLWRFGAPEGRA 831

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
               K                  + ++ +    F+P+ + +A +  D    L         
Sbjct: 832  VAGK---------------AFTAGEKDVLALAFAPDGRTLAVSGRDQRVGLWDITDPAAP 876

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----------------------D 283
             R  K +    S I A  +S +G    +    D                           
Sbjct: 877  RRKGKPLTGATSWINALAYSPDGGTLAVGGSDDLVRLWDVRDRRVTATFRHTGPVTALGW 936

Query: 284  IYSVDLQSNATERLT----------NTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                 L S  ++R+T          ++  +  + ++SPD   +   +DR    +L+ + +
Sbjct: 937  RDRSTLVSGGSDRVTRLWHLPSPVLSSGAVVNAFAFSPDGELLAIGTDRL---RLWRV-A 992

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLV--ED 389
            +G    R       +     +SP G  +A    +G      V  +       R L     
Sbjct: 993  SGRPLGRELTVPGGAVTAVAFSPDGRTLAIAGTTGTVRLWDVADETRPVALGRALTGPAS 1052

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
              +Q+ T+SP GR+L      + D   +L+ +   GR   L     + S
Sbjct: 1053 GYVQSVTFSPDGRTLA---TGNDDQTVRLWDVTTPGRPTRLPKQSGFKS 1098



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 74/225 (32%), Gaps = 24/225 (10%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            S   ++    FSP+ + +A  T                    + +      + A  FS +
Sbjct: 962  SSGAVVNAFAFSPDGELLAIGTDRLR-----LWRVASGRPLGRELTVPGGAVTAVAFSPD 1016

Query: 269  GKRALISVQKDEAMDIYSVDLQSNAT---ERLTN-TLFINISASYSPDSSQIVFESDREG 324
            G+   I+      + ++ V  ++        LT        S ++SPD   +    + + 
Sbjct: 1017 GRTLAIAGT-TGTVRLWDVADETRPVALGRALTGPASGYVQSVTFSPDGRTLA-TGNDDQ 1074

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVM------K 377
              +L+ + + G   +   Q    SY     +SP G  +A          +  M      +
Sbjct: 1075 TVRLWDVTTPGRPTRLPKQSGFKSYVLSVAFSPDGRTLAAGSADHTV-RLWDMRHRATPR 1133

Query: 378  KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              G   R   +   + +  +SP GR+L        D    L+ + 
Sbjct: 1134 PLGRPLRKHTDT--VYSVAFSPDGRTLAVGS---ADHTVGLWDMS 1173



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 58/374 (15%), Positives = 121/374 (32%), Gaps = 68/374 (18%)

Query: 107  GAQVLVTGR---VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            G Q L  GR   ++ +G     V  RLWD  D ++ +      +            D +Y
Sbjct: 659  GVQALALGRRGHLLAQGDAGGTV--RLWDTGDSRRPVALGRPLTA---------FPDAVY 707

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                      + +IL V+ +  +  + +           +          ++   FSP+ 
Sbjct: 708  AVALSP----DEKILAVAGAHRTVRLWDVGTPARP--RPLGTPLTGPANTVYGLAFSPDG 761

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
              +A  + DD   L        +    + +   R+ + A  FS +G+    +   D  + 
Sbjct: 762  HALAAGSADDAVHLWDVNDPGHVRPMGRPLTGSRNYVHAVAFSPDGRTLA-AGSGDGKVR 820

Query: 284  IYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQK 339
            ++            +  T      ++ +++PD   +   S R+ +  L+ +       +K
Sbjct: 821  LWRFGAPEGRAVAGKAFTAGEKDVLALAFAPDGRTLA-VSGRDQRVGLWDITDPAAPRRK 879

Query: 340  RISQDKEASYFDP-VWSPQGDLIAFT--------------------KFSGEKFAIGVMKK 378
                    S+ +   +SP G  +A                      + +G   A+G   +
Sbjct: 880  GKPLTGATSWINALAYSPDGGTLAVGGSDDLVRLWDVRDRRVTATFRHTGPVTALGWRDR 939

Query: 379  ----DGSQER----------LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 G  +R          +L   + + A  +SP G  L     +      +L+ +  +
Sbjct: 940  STLVSGGSDRVTRLWHLPSPVLSSGAVVNAFAFSPDGELLAIGTDR-----LRLWRV-AS 993

Query: 425  GRNE-TLINTPAYA 437
            GR     +  P  A
Sbjct: 994  GRPLGRELTVPGGA 1007



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 47/335 (14%), Positives = 105/335 (31%), Gaps = 42/335 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD----IYQSITGE 169
            GR +  G    +V    +   + + + GK F +       +A   + D            
Sbjct: 807  GRTLAAGSGDGKVRLWRFGAPEGRAVAGKAFTAGEKDV--LALAFAPDGRTLAVSGRDQR 864

Query: 170  KGDFNSRILFVSESVVSGIIKNSLCV----MDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
             G ++             +   +  +       DG  +       D ++    +    ++
Sbjct: 865  VGLWDITDPAAPRRKGKPLTGATSWINALAYSPDGGTL--AVGGSDDLVRL--WDVRDRR 920

Query: 226  VAYATYDDEDILRVYLMD------------TRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            V         +  +   D            TR+   P  + +  +++ A  FS +G+   
Sbjct: 921  VTATFRHTGPVTALGWRDRSTLVSGGSDRVTRLWHLPSPVLSSGAVVNAFAFSPDGELLA 980

Query: 274  ISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            I     + + ++ V        R LT       + ++SPD   +   +   G  +L+ + 
Sbjct: 981  I---GTDRLRLWRV-ASGRPLGRELTVPGGAVTAVAFSPDGRTLA-IAGTTGTVRLWDVA 1035

Query: 333  SNGSDQ---KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                     + ++           +SP G  +A T    +   +  +   G   RL  + 
Sbjct: 1036 DETRPVALGRALTGPASGYVQSVTFSPDGRTLA-TGNDDQTVRLWDVTTPGRPTRLPKQS 1094

Query: 390  S---NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 + +  +SP GR+L        D   +L+ +
Sbjct: 1095 GFKSYVLSVAFSPDGRTLAAGS---ADHTVRLWDM 1126



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 67/221 (30%), Gaps = 23/221 (10%)

Query: 220 SPNQQKVAYATYDDEDIL--------RVYLMDTRIDRAP----KRIGNFRSMILAPRFSS 267
           SP+   V          L         V L DT   R P    + +  F   + A   S 
Sbjct: 654 SPDGGGVQALALGRRGHLLAQGDAGGTVRLWDTGDSRRPVALGRPLTAFPDAVYAVALSP 713

Query: 268 NGKRALISVQ-KDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGK 325
           + K   ++   +   +       +       LT         ++SPD   +   S  +  
Sbjct: 714 DEKILAVAGAHRTVRLWDVGTPARPRPLGTPLTGPANTVYGLAFSPDGHALAAGS-ADDA 772

Query: 326 EQLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-- 381
             L+ +   G      R             +SP G  +A     G+         +G   
Sbjct: 773 VHLWDVNDPGHVRPMGRPLTGSRNYVHAVAFSPDGRTLAAGSGDGKVRLWRFGAPEGRAV 832

Query: 382 -QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +     + ++ A  ++P GR+L  S +   D    L+ I
Sbjct: 833 AGKAFTAGEKDVLALAFAPDGRTLAVSGR---DQRVGLWDI 870



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 81/245 (33%), Gaps = 37/245 (15%)

Query: 129  RLWDVKDRKQI--IGKKFFSSPASW----------RKIAHTISDDIYQ-----------S 165
            RLWDV D  +   +G+      + +          R +A    D   +            
Sbjct: 1030 RLWDVADETRPVALGRALTGPASGYVQSVTFSPDGRTLATGNDDQTVRLWDVTTPGRPTR 1089

Query: 166  ITGEKGDFNSRILFVSESVVS-----GIIKNSLCVMDRDG-ANIRYL---TPSRDQILFE 216
            +  + G F S +L V+ S        G   +++ + D    A  R L          ++ 
Sbjct: 1090 LPKQSG-FKSYVLSVAFSPDGRTLAAGSADHTVRLWDMRHRATPRPLGRPLRKHTDTVYS 1148

Query: 217  PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              FSP+ + +A  + D    L             + +    + + A  FS +G+    + 
Sbjct: 1149 VAFSPDGRTLAVGSADHTVGLWDMSRPAAPRPLGRPLTGPTNYVYAVAFSPDGRTLA-AG 1207

Query: 277  QKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
              D  + ++ V   S+ T    LT       + S+SP    +      +   +L+     
Sbjct: 1208 STDHTVWLWGVTDPSSPTVMATLTGPTDHVYAVSFSPKGHTLA-AGGADHTVRLWATDPA 1266

Query: 335  GSDQK 339
             +  +
Sbjct: 1267 AAASR 1271



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 58/205 (28%), Gaps = 39/205 (19%)

Query: 245 RIDRAPKRIGNFRSMILAPRF----SSNGK-----------RALISVQKDEAMDIYSVDL 289
           RI   P+ + +  +   +P      S +G              L        + ++    
Sbjct: 629 RIGPTPEAVSSLLNSSASPAVTRLPSPDGGGVQALALGRRGHLLAQGDAGGTVRLW---- 684

Query: 290 QSNATER-------LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +  + R       LT       + + SPD   +           + +       + R  
Sbjct: 685 DTGDSRRPVALGRPLTAFPDAVYAVALSPDEKILAVA---GAHRTVRLWDVGTPARPRPL 741

Query: 343 ----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSN-LQAP 395
                    + +   +SP G  +A            V      +   R L    N + A 
Sbjct: 742 GTPLTGPANTVYGLAFSPDGHALAAGSADDAVHLWDVNDPGHVRPMGRPLTGSRNYVHAV 801

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYS 420
            +SP GR+L       GD   +L+ 
Sbjct: 802 AFSPDGRTLAAGS---GDGKVRLWR 823


>gi|319424793|gb|ADV52867.1| WD40 domain protein beta Propeller [Shewanella putrefaciens 200]
          Length = 675

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 100/317 (31%), Gaps = 68/317 (21%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVYLMDTR 245
                 L   D +G N R +T  +   + EP FSP+ + +A+ +  +ED   ++YL+   
Sbjct: 61  DKGSTQLWRFDGEGKNNRAITA-KGLKVREPVFSPDGKTLAFISERNEDDAGQIYLLPMD 119

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALI------------------------------- 274
                +R+ +  + +   ++   GK                                   
Sbjct: 120 GPGEAQRLTDIPTGVNGIKW--VGKHLYFISNIFPNQKWDEMKTQLKTDKDNKVSARQWN 177

Query: 275 ---------SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQI 316
                     + +     ++ +       E +T  L   +             SP+   I
Sbjct: 178 ALPYAQFDHWLDERRQAHVFRIPALGGEVEAVTQPLGYEL-PRSSQSSSSYDISPNERLI 236

Query: 317 VFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            F +            +++        + I+ + +A+  +P +SP G  +AFT+     F
Sbjct: 237 AFSAYGSDNRVDPKLDIFLATIGSGKAENITPENQAADVNPNFSPNGKTLAFTRQKIPGF 296

Query: 372 -----AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + ++  D  +   L    D ++    W+P  +   F    D    S++Y ID  
Sbjct: 297 YADTARLMLLDIDSRKLNTLTPEWDRSVSQFNWTPDSKG--FYAAIDDAATSRIYHIDAK 354

Query: 425 GRNETLINTPAYASDPQ 441
                 I        P 
Sbjct: 355 NGKVKAITGATDFGQPA 371



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 96/296 (32%), Gaps = 72/296 (24%)

Query: 217 PRFSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  SP+ + +      Y   +D+   +++  D    +  + I      +  P FS +GK 
Sbjct: 40  PVVSPSGEHIIAPVTEYDLKEDKGSTQLWRFDGE-GKNNRAITAKGLKVREPVFSPDGKT 98

Query: 272 ALISVQK--DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-------- 320
                ++  D+A  IY + +      +RLT+         +      + F S        
Sbjct: 99  LAFISERNEDDAGQIYLLPMDGPGEAQRLTDIPTGVNGIKWV--GKHLYFISNIFPNQKW 156

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQDKEA- 347
                                           D   +  ++ + + G + + ++Q     
Sbjct: 157 DEMKTQLKTDKDNKVSARQWNALPYAQFDHWLDERRQAHVFRIPALGGEVEAVTQPLGYE 216

Query: 348 ------SYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLV--EDSNLQA 394
                 S      SP   LIAF+ +  +        I +      +   +     +    
Sbjct: 217 LPRSSQSSSSYDISPNERLIAFSAYGSDNRVDPKLDIFLATIGSGKAENITPENQAADVN 276

Query: 395 PTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLINTPAYASDPQ---WVG 444
           P +SP+G++L F+R+K        ++L  +D++ R    + TP +        W  
Sbjct: 277 PNFSPNGKTLAFTRQKIPGFYADTARLMLLDIDSRKLNTL-TPEWDRSVSQFNWTP 331



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 60/177 (33%), Gaps = 14/177 (7%)

Query: 266 SSNGKRALISV-----QKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFE 319
           S N +    S      + D  +DI+   + S   E +T      +++ ++SP+   + F 
Sbjct: 230 SPNERLIAFSAYGSDNRVDPKLDIFLATIGSGKAENITPENQAADVNPNFSPNGKTLAFT 289

Query: 320 SDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             +         +L ++  +      ++ + + S     W+P                I 
Sbjct: 290 RQKIPGFYADTARLMLLDIDSRKLNTLTPEWDRSVSQFNWTPDSKGFYAAIDDAATSRIY 349

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETL 430
            +     + + +   ++   P     G  +     +     ++L SI+  NG+   L
Sbjct: 350 HIDAKNGKVKAITGATDFGQPAIGKDGELIA--TNESFLHPARLVSINPRNGKTVRL 404



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 63/154 (40%), Gaps = 12/154 (7%)

Query: 219 FSPNQQKVAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            SPN++ +A++ Y  ++     L ++L      +A       ++  + P FS NGK    
Sbjct: 229 ISPNERLIAFSAYGSDNRVDPKLDIFLATIGSGKAENITPENQAADVNPNFSPNGKTLAF 288

Query: 275 SVQKD-----EAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQL 328
           + QK      +   +  +D+ S     LT     ++S  +++PDS       D     ++
Sbjct: 289 TRQKIPGFYADTARLMLLDIDSRKLNTLTPEWDRSVSQFNWTPDSKGFYAAIDDAATSRI 348

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           Y + +     K I+      +  P     G+LIA
Sbjct: 349 YHIDAKNGKVKAIT--GATDFGQPAIGKDGELIA 380



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 9/104 (8%)

Query: 350 FDPVWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGR 402
             PV SP G+ I         K       +     +G   R +      ++ P +SP G+
Sbjct: 38  GSPVVSPSGEHIIAPVTEYDLKEDKGSTQLWRFDGEGKNNRAITAKGLKVREPVFSPDGK 97

Query: 403 SLIFSRKKDGDTGSKLYS--IDLNGRNETLINTPAYASDPQWVG 444
           +L F  +++ D   ++Y   +D  G  + L + P   +  +WVG
Sbjct: 98  TLAFISERNEDDAGQIYLLPMDGPGEAQRLTDIPTGVNGIKWVG 141



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 46/116 (39%), Gaps = 12/116 (10%)

Query: 260 ILAPRFSSNGKRAL-----ISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +P  S +G+  +       +++D  +  ++  D +      +T          +SPD 
Sbjct: 37  IGSPVVSPSGEHIIAPVTEYDLKEDKGSTQLWRFDGEGKNNRAITAKGLKVREPVFSPDG 96

Query: 314 SQIVFESDR--EGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             + F S+R  +   Q+Y++  +G  + +R++ D         W   G  + F   
Sbjct: 97  KTLAFISERNEDDAGQIYLLPMDGPGEAQRLT-DIPTGVNGIKWV--GKHLYFISN 149



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 51/168 (30%), Gaps = 7/168 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            + S++ V   +   L  +         +TP        P FSPN + +A+         
Sbjct: 240 AYGSDNRVDPKLDIFLATIGS--GKAENITPENQAADVNPNFSPNGKTLAFTRQKIPGFY 297

Query: 238 ----RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               R+ L+D    +       +   +    ++ + K    ++       IY +D ++  
Sbjct: 298 ADTARLMLLDIDSRKLNTLTPEWDRSVSQFNWTPDSKGFYAAIDDAATSRIYHIDAKNGK 357

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            + +T         +   D   I          +L  +        R+
Sbjct: 358 VKAITGATDF-GQPAIGKDGELIATNESFLHPARLVSINPRNGKTVRL 404


>gi|37520475|ref|NP_923852.1| WD repeat-containing protein [Gloeobacter violaceus PCC 7421]
 gi|35211469|dbj|BAC88847.1| WD-repeat protein [Gloeobacter violaceus PCC 7421]
          Length = 551

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 74/221 (33%), Gaps = 13/221 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S      + + D     +R+      Q ++    +P+ + +A  + D      V L D  
Sbjct: 329 SAGSDRRVRLWDVGTGKLRHTLKGHSQPVWTLAMAPDGRILASGSGDR----SVRLWDIA 384

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R   R+      + A  FS +G+    S  KDE + +++          L        
Sbjct: 385 SGRQLYRLRGHGDWVFAVAFSPDGRTLA-SAGKDETIRLWN-SADGKLLATLRGHSAPVR 442

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  +S D   +   S     + + +    G   +               +P G L+A   
Sbjct: 443 ALDWSKDGRTLASAS---WDKTVALWDVPGRTVRTRLSGHTGRVTAVSLAPDGQLVASGS 499

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLI 405
             G    + + + D  ++    +  +   +  +SP GR LI
Sbjct: 500 IDGT---VRLWRPDTRRQIHRFDLPDWVLSLGFSPDGRMLI 537



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 80/249 (32%), Gaps = 35/249 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR +       RV  RLWDV   K              R      S  ++       G  
Sbjct: 324 GRALASAGSDRRV--RLWDVGTGK-------------LRHTLKGHSQPVWTLAMAPDGRI 368

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                       SG    S+ + D       Y        +F   FSP+ + +A      
Sbjct: 369 L----------ASGSGDRSVRLWDIASGRQLYRLRGHGDWVFAVAFSPDGRTLA----SA 414

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L ++   +    +    + + A  +S +G+    S   D+ + ++ V  ++  
Sbjct: 415 GKDETIRLWNSADGKLLATLRGHSAPVRALDWSKDGRTLA-SASWDKTVALWDVPGRT-V 472

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             RL+       + S +PD  Q+V     +G  +L+   +     +    D         
Sbjct: 473 RTRLSGHTGRVTAVSLAPDG-QLVASGSIDGTVRLWRPDTRRQIHR---FDLPDWVLSLG 528

Query: 354 WSPQGDLIA 362
           +SP G ++ 
Sbjct: 529 FSPDGRMLI 537



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 20/198 (10%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + +G     + A     +G+    S   D A+ ++S        + L        +  ++
Sbjct: 265 RTVGAHPGPVWASAVRPDGRMYA-SGDDDGAIRLWS--PAGTLLQTLEGHTGTVRAVVFT 321

Query: 311 PDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           PD   +    SDR    ++ +        +   +      +    +P G ++A +     
Sbjct: 322 PDGRALASAGSDR----RVRLWDVGTGKLRHTLKGHSQPVWTLAMAPDGRILA-SGSGDR 376

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              +  +       RL      + A  +SP GR+L        D   +L++   +G+   
Sbjct: 377 SVRLWDIASGRQLYRLRGHGDWVFAVAFSPDGRTLA---SAGKDETIRLWN-SADGK--- 429

Query: 430 LINTPAYASDPQ----WV 443
           L+ T    S P     W 
Sbjct: 430 LLATLRGHSAPVRALDWS 447


>gi|86607572|ref|YP_476334.1| WD-40-like beta propeller repeat-containing protein [Synechococcus
           sp. JA-2-3B'a(2-13)]
 gi|86556114|gb|ABD01071.1| WD40-like beta propeller repeat protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 194

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 9/132 (6%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN------ISASYSPDSSQI 316
           P F+ +G+  + S  +  + DI+  D       RL +   +N       S   S D   I
Sbjct: 56  PAFNGDGRYLVFSSARSGSQDIFLYD---TVERRLVDLPGLNSSDVAATSPDISADGRYI 112

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           V+ S+  GK ++++        + IS        +P  S  G  IAF      ++ I + 
Sbjct: 113 VYVSNALGKSEIFLYDRETRRIENISSRVPGDVRNPTISGDGRFIAFESNGQGQWHIEIF 172

Query: 377 KKDGSQERLLVE 388
            +  +       
Sbjct: 173 DRGPAASTRPTS 184



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 60/150 (40%), Gaps = 11/150 (7%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDPV 353
           N++F +   +++ D   +VF S R G + +++     + ++R+         + +   P 
Sbjct: 48  NSIFPDGEPAFNGDGRYLVFSSARSGSQDIFLYD---TVERRLVDLPGLNSSDVAATSPD 104

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKD 411
            S  G  I +   +  K  I +  ++  +   +      +++ PT S  GR + F     
Sbjct: 105 ISADGRYIVYVSNALGKSEIFLYDRETRRIENISSRVPGDVRNPTISGDGRFIAFESNGQ 164

Query: 412 GDTGSKLYSI-DLNGRNETLINTPAYASDP 440
           G    +++          T +++P    +P
Sbjct: 165 GQWHIEIFDRGPAASTRPTSLSSPTSGDNP 194



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 55/134 (41%), Gaps = 12/134 (8%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA------PRFSSNG 269
           EP F+ + + + +++        ++L DT      +R+ +   +  +      P  S++G
Sbjct: 55  EPAFNGDGRYLVFSSARSGS-QDIFLYDT----VERRLVDLPGLNSSDVAATSPDISADG 109

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           +  +         +I+  D ++   E +++       + + S D   I FES+ +G+  +
Sbjct: 110 RYIVYVSNALGKSEIFLYDRETRRIENISSRVPGDVRNPTISGDGRFIAFESNGQGQWHI 169

Query: 329 YVMQSNGSDQKRIS 342
            +     +   R +
Sbjct: 170 EIFDRGPAASTRPT 183



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 27/93 (29%), Gaps = 1/93 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S D     P  S + + + Y +        ++L D    R           +  P  S
Sbjct: 93  LNSSDVAATSPDISADGRYIVYVSNALGKS-EIFLYDRETRRIENISSRVPGDVRNPTIS 151

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            +G+             I   D    A+ R T+
Sbjct: 152 GDGRFIAFESNGQGQWHIEIFDRGPAASTRPTS 184


>gi|77454780|ref|YP_345648.1| WD-40 repeat-containing protein [Rhodococcus erythropolis PR4]
 gi|77019780|dbj|BAE46156.1| putative WD-40 repeat protein [Rhodococcus erythropolis PR4]
          Length = 1298

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 62/380 (16%), Positives = 120/380 (31%), Gaps = 44/380 (11%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDL 73
            + L  LL ++      + HA    +    N +  +    +          +S  VS  L
Sbjct: 558 MVGLLSLLTVVAMVLALTSHAQRVSSDVQRNDAQFAEVLAQAGRTQNSDPSLSAQVS--L 615

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGA--QVLVTGRVIKEGKDRLRVEFRLW 131
             S +   +   +    + + ++          GA     V G              RLW
Sbjct: 616 AGSAL-RPLDPAAHAMVLASQNAPLASPMSGHTGAIYDTAVAGN-GIVATASYDRTIRLW 673

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS--ESVVSGII 189
           D    KQ+ G            + HT               + + + F      +VSG  
Sbjct: 674 DPLSGKQLGG----------PLVGHT--------------SWVTSVAFSPDGHYLVSGGG 709

Query: 190 KNSLCVMD-RDGANIRYL---TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             +L + D RD      L          ++   FSP+ + +A A  D    L        
Sbjct: 710 DGTLRLWDVRDPDRPSPLGSPVVGHSGAIYMVAFSPDGRTIATAGDDTTARLWDVDNSAA 769

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNAT---ERLTNTL 301
           + +    +    + +    FS +G+    +   D    +++V DL          L    
Sbjct: 770 VTQRTPPLRGHEAPVRTVAFSPDGRTLA-TGSDDHTAILWNVEDLAGPVIPWGPPLRVHA 828

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGD 359
               S ++SPDS  +   SD +   +++++ +  +     +      A+ +   +SP G 
Sbjct: 829 DTVHSVAFSPDSRMLATGSD-DHSVRIWMVDNPNTPVMGQTPLIGHTAAIWSVSFSPDGQ 887

Query: 360 LIAFTKFSGEKFAIGVMKKD 379
            +    + G      V+  D
Sbjct: 888 SLVSASWDGTARVWSVIDPD 907



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 91/265 (34%), Gaps = 22/265 (8%)

Query: 186  SGIIKNSLCVMDRDGAN---IRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYL 241
            +G +  ++ + D  G     IR    + D +  E    SP+   +A A      +    +
Sbjct: 975  TGSLDGTVLLWDITGGRTPTIRERLRAPDGLGIENLALSPDGSTLATAGLGSTGVQLWTI 1034

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATER--LT 298
                   A   +           FS +    L +   D+++ ++ VD  S     R  LT
Sbjct: 1035 TSGATAAAGPVLPISARYTHELAFSPD-SSILATAADDQSLMLWRVDDPSRPDPIRAALT 1093

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSP 356
                   S ++SP  + I   S  +   +++   +      R         +     +SP
Sbjct: 1094 GPSGWINSVTFSPGGNLIAVGSS-DNTVRIWDASNPAMPVPRRNALVGHTGAVNSVAFSP 1152

Query: 357  QGDLIAFTKFSGEKFAIGVM----KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             G L+A +    +   I  +      D + E L    S +++  +S  G  L        
Sbjct: 1153 DGQLLA-SGSDDQSIRIWSIGSDNDTDANPEVLTGHTSTVRSVAFSADGEHLASGSD--- 1208

Query: 413  DTGSKLYSID---LNGRNETLINTP 434
            D   +++ +D   + G   +++ T 
Sbjct: 1209 DQSVRIWDVDGLRIRGTGTSIVPTG 1233



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/294 (13%), Positives = 87/294 (29%), Gaps = 26/294 (8%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                L     LWD+   +    ++   +P                   G +    S    
Sbjct: 974  ATGSLDGTVLLWDITGGRTPTIRERLRAPDGL----------------GIENLALSPDGS 1017

Query: 180  VSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
               +   G     L  +     A    + P   +   E  FSP+   +A A  D   +L 
Sbjct: 1018 TLATAGLGSTGVQLWTITSGATAAAGPVLPISARYTHELAFSPDSSILATAADDQSLMLW 1077

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-- 296
                 +R D     +      I +  FS  G    +    +      + +       R  
Sbjct: 1078 RVDDPSRPDPIRAALTGPSGWINSVTFSPGGNLIAVGSSDNTVRIWDASNPAMPVPRRNA 1137

Query: 297  LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM--QSNGSDQKRISQDKEASYFDPVW 354
            L        S ++SPD   +   SD +   +++ +   ++      +     ++     +
Sbjct: 1138 LVGHTGAVNSVAFSPDGQLLASGSD-DQSIRIWSIGSDNDTDANPEVLTGHTSTVRSVAF 1196

Query: 355  SPQGDLIAFTKFSGEKFAIGVMK---KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            S  G+ +A +    +   I  +      G+   ++   +      + P+G  ++
Sbjct: 1197 SADGEHLA-SGSDDQSVRIWDVDGLRIRGTGTSIVPTGTVRWRVAFDPAGSRIM 1249


>gi|299135935|ref|ZP_07029119.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
 gi|298602059|gb|EFI58213.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
          Length = 728

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 67/211 (31%), Gaps = 31/211 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF----RSMILAPRFSSNGKRALI- 274
           +P   + A+    +    R  +       A ++I  +       I    +S +G      
Sbjct: 60  APVGTQFAWIENAEG---RRNIWVGGPQAAARQITTYTEDDGQDIDGLAWSPDGTSLAYN 116

Query: 275 ---------------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                           +Q+   ++++   L +     L   L    +  +S D   ++F 
Sbjct: 117 RGAENGAGGKPANPAHLQRPTPVEVWVQPLAAGQQPML---LGEGHAPLFSRDGRSVLFL 173

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             R G  Q++                  S      SP G L+AF     +   IG+    
Sbjct: 174 --RGG--QIWSADLTAPTAAHQLVFDRGSASSLTLSPDGKLLAFVSRRKDHSFIGLFDLG 229

Query: 380 GSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
               R L     +  AP++SP  R + + RK
Sbjct: 230 TRTLRFLAPSTGSDLAPSFSPDSRQIAWLRK 260



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 82/252 (32%), Gaps = 52/252 (20%)

Query: 218 RFSPNQQKVAY---------------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +SP+   +AY               A       + V++      + P  +G       A
Sbjct: 105 AWSPDGTSLAYNRGAENGAGGKPANPAHLQRPTPVEVWVQPLAAGQQPMLLGEGH----A 160

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD 321
           P FS +G+  L          I+S DL +  A  +L        S + SPD   + F S 
Sbjct: 161 PLFSRDGRSVLF----LRGGQIWSADLTAPTAAHQLVFDRGSASSLTLSPDGKLLAFVSR 216

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-------------TKFSG 368
           R+    + +    G+   R       S   P +SP    IA+              + S 
Sbjct: 217 RKDHSFIGLFDL-GTRTLRFLAPSTGSDLAPSFSPDSRQIAWLRKPFTEVPEFATNRTSA 275

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS------------GRSLIFSRKKDGDTGS 416
             ++I +      +   L      +  +  P             G  L+F  + DG    
Sbjct: 276 YPWSIQLADGASGEAHTLYSPKPNERGSVLPHLSSGGPHVFWTVGSKLLFFSEADG--WV 333

Query: 417 KLYSIDLNGRNE 428
            LYSI +  +++
Sbjct: 334 HLYSIQITSKDK 345



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 50/265 (18%), Positives = 92/265 (34%), Gaps = 43/265 (16%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P FS + + V +         +++  D     A  ++   R    +   S +GK    
Sbjct: 159 HAPLFSRDGRSVLFL-----RGGQIWSADLTAPTAAHQLVFDRGSASSLTLSPDGKLLAF 213

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-----------FESDRE 323
             ++ +   I   DL +     L  +   +++ S+SPDS QI            F ++R 
Sbjct: 214 VSRRKDHSFIGLFDLGTRTLRFLAPSTGSDLAPSFSPDSRQIAWLRKPFTEVPEFATNRT 273

Query: 324 GKE--QLYVMQSNGSDQKRISQDKEASYFD--PVWSPQG---------DLIAFTKFSG-- 368
                 + +      +   +   K        P  S  G          L+ F++  G  
Sbjct: 274 SAYPWSIQLADGASGEAHTLYSPKPNERGSVLPHLSSGGPHVFWTVGSKLLFFSEADGWV 333

Query: 369 EKFAIGVMKKD--------GSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             ++I +  KD        GSQ RLL   +  ++  T    GR+++++          L+
Sbjct: 334 HLYSIQITSKDKSPKLDEHGSQPRLLTPGAFEVEDATLDSGGRTILYTSNATDADRRHLW 393

Query: 420 SIDL---NGRNETLINTPAYASDPQ 441
            IDL   N     L +     + PQ
Sbjct: 394 KIDLVHANAEPMALTHGSGIETHPQ 418



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 53/134 (39%), Gaps = 28/134 (20%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLIAFTK- 365
           +P  +Q  +  + EG+  ++V     +  ++I+    D         WSP G  +A+ + 
Sbjct: 60  APVGTQFAWIENAEGRRNIWVGGPQ-AAARQITTYTEDDGQDIDGLAWSPDGTSLAYNRG 118

Query: 366 ---------------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
                                 + V      Q+ +L+ + +  AP +S  GRS++F R  
Sbjct: 119 AENGAGGKPANPAHLQRPTPVEVWVQPLAAGQQPMLLGEGH--APLFSRDGRSVLFLR-- 174

Query: 411 DGDTGSKLYSIDLN 424
               G +++S DL 
Sbjct: 175 ----GGQIWSADLT 184



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/218 (11%), Positives = 61/218 (27%), Gaps = 36/218 (16%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G                P FSP+ +++A+      ++       T       ++ +  S 
Sbjct: 229 GTRTLRFLAPSTGSDLAPSFSPDSRQIAWLRKPFTEVPEFATNRTSAYPWSIQLADGASG 288

Query: 260 ILAPRFSSN----------------------GKRALISVQKDEAMDIYSV---------- 287
                +S                        G + L   + D  + +YS+          
Sbjct: 289 EAHTLYSPKPNERGSVLPHLSSGGPHVFWTVGSKLLFFSEADGWVHLYSIQITSKDKSPK 348

Query: 288 -DLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRIS-Q 343
            D   +    LT   F    A+       I++ S+     +  L+ +    ++ + ++  
Sbjct: 349 LDEHGSQPRLLTPGAFEVEDATLDSGGRTILYTSNATDADRRHLWKIDLVHANAEPMALT 408

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                   P     G + A    +       ++  +G+
Sbjct: 409 HGSGIETHPQMDSTGKIAAIASDARTPSHPVLVATNGT 446


>gi|218437077|ref|YP_002375406.1| serine/threonine protein kinase with WD40 repeats [Cyanothece sp.
           PCC 7424]
 gi|218169805|gb|ACK68538.1| serine/threonine protein kinase with WD40 repeats [Cyanothece sp.
           PCC 7424]
          Length = 930

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 98/245 (40%), Gaps = 17/245 (6%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  + + D     +        +++ +  FSP+ Q +   + D+     + + D    +
Sbjct: 408 WQEIIYIWDLKTGGLLQQLKGHSKLINDVAFSPDGQILVSGSNDE----SLKVWDVISGQ 463

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
               +    + +    FSS+G+    S  +D+++ I+ +D  S    R+  +  + I + 
Sbjct: 464 IIYHLQGHNAAVTCVSFSSDGRFIA-SGSRDQSVRIWLLD--SGQEFRVLESPNLGIESI 520

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++S D+  I     R+ K +L+ ++S      R    K+       +S  G L+AF    
Sbjct: 521 AFSVDNQWIA-TGSRDHKVRLWTIESA-EILDRFDGHKDW-VTSVAFSQDGHLLAFAGGI 577

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +K  I V      +E L +E       T  +SP  R LI       D   +++ ++  G
Sbjct: 578 NDK-KIRVWNLISQKEILPLEGHGNTVNTIMFSPDSRYLISGSY---DYTLRVWDLNEGG 633

Query: 426 RNETL 430
             + L
Sbjct: 634 EIQQL 638



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 110/329 (33%), Gaps = 43/329 (13%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKK------FFSS-PASWR--------KIAHTISDDIYQS 165
                   R+WD+ +  +I   K      +  +     R         + H       + 
Sbjct: 617 SGSYDYTLRVWDLNEGGEIQQLKKHTNWVYTVACSPDNRLITCAGNDHLIHVWDSVQNRK 676

Query: 166 ITGEKG--DFNSRILFVSESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFS 220
           I    G  DF + + F  +    VSG    ++ + +   G  +R     +D I     FS
Sbjct: 677 IMSLAGHTDFVTSLAFSEDGKFLVSGSWDKTVRLWEVMSGKQLRCWPGHQDLIKSV-AFS 735

Query: 221 PNQQKVAYATYDDEDILRVY-----LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           PN++ +A  ++D    +R++      +     +  + +      +    FS +    L S
Sbjct: 736 PNKRFIASGSWD--KTVRLWDLSSPRLTLTGGKGVRILKGHTQQVECVTFSLD-NLLLAS 792

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV-MQSN 334
              D+ + I+ V       ++        +S ++SPDS  ++      GK+ + +     
Sbjct: 793 GSWDQTIRIWEVS-SGQEVQQFHEHTSPVLSVAFSPDSQWLI----SGGKDNILILWDVM 847

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNL 392
                   Q          +SP G LI           + +   +      +     +++
Sbjct: 848 KGTIIHKLQGHTHYVNSVAFSPDGKLIVSGSHDCT---VRLWDVESGSLLQVWQGHTNSV 904

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           ++  +S  G  +      D D   +L+ +
Sbjct: 905 KSVCFSADGTFI---TSGDNDGVVRLWRV 930



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 78/229 (34%), Gaps = 12/229 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    SL V D     I Y     +  +    FS + + +A  + D      V +   
Sbjct: 446 VSGSNDESLKVWDVISGQIIYHLQGHNAAVTCVSFSSDGRFIASGSRDQ----SVRIWLL 501

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  + + +    I +  FS + +    +  +D  + +++++      +R        
Sbjct: 502 DSGQEFRVLESPNLGIESIAFSVDNQWIA-TGSRDHKVRLWTIESAE-ILDRFDGHKDWV 559

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++S D   + F      K ++ V       +    +    +    ++SP    +   
Sbjct: 560 TSVAFSQDGHLLAFAGGINDK-KIRVWNLISQKEILPLEGHGNTVNTIMFSPDSRYLISG 618

Query: 365 KFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKD 411
            +    + + V   + G + + L + +N       SP  R +  +    
Sbjct: 619 SYD---YTLRVWDLNEGGEIQQLKKHTNWVYTVACSPDNRLITCAGNDH 664


>gi|170115039|ref|XP_001888715.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636410|gb|EDR00706.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 820

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 100/275 (36%), Gaps = 31/275 (11%)

Query: 150 SWRKIAHTISDDIYQSITGEKGD-------FNSRILFVSES-----VVSGIIKNSLCVMD 197
             R+IA   +D   +    E G         + RI+ V+ S     VVSG +  ++ + D
Sbjct: 501 DNRRIASGSNDRTVRIWDAETGKPVGEPFQGHGRIMSVAFSPDGKHVVSGSVDQTVNIWD 560

Query: 198 R-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
              G  +          +    FSP+  ++A  + D    +R++   T  +   +     
Sbjct: 561 VGTGKPMGEPLRGHTDSVCSVAFSPDSTRIASGSLD--QAIRIW-DATTWNLLGEPFRGH 617

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSS 314
              + +  FS +G+  ++S   D+ + I+  D+++     E          S ++SPD  
Sbjct: 618 TKGVRSLAFSPDGRS-VVSGSDDQTVRIW--DVETGKPLGEPFRGHTKNVNSVAFSPDGE 674

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAI 373
           + VF    +G  +++        Q            D   +SP G+ +    F G    +
Sbjct: 675 R-VFSGSLDGIVRIW--DPKTGKQLGEPFRGHTKDVDSIAFSPDGERVVSGSFEGT---V 728

Query: 374 GVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLI 405
            +      +        +     +  +SP GR ++
Sbjct: 729 RIWDAKTGKLVRKPFQGHTDGILSVAFSPDGRRVV 763



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 96/286 (33%), Gaps = 26/286 (9%)

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITG-----EKGDFNSRILFVSESVVSGIIKNS 192
           Q++           R   H    D + +++         +    I  +  S   G  + +
Sbjct: 413 QLLNNTVDILGNILRDGPH-FDLDPHSNLSPHLNLSPSIEIRPLISDLGRSKEKGHQEAA 471

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
              +D+      ++       +    FSP+ +++A  + D      V + D    +    
Sbjct: 472 QQFLDQLTDPSIFILSGHTSTVCSVTFSPDNRRIASGSNDR----TVRIWDAETGKPVGE 527

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYS 310
                  I++  FS +GK  ++S   D+ ++I+  D+ +     E L        S ++S
Sbjct: 528 PFQGHGRIMSVAFSPDGKH-VVSGSVDQTVNIW--DVGTGKPMGEPLRGHTDSVCSVAFS 584

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGE 369
           PDS++I   S     + + +  +   +                 +SP G  +        
Sbjct: 585 PDSTRIASGSL---DQAIRIWDATTWNLLGEPFRGHTKGVRSLAFSPDGRSVVSGSDDQT 641

Query: 370 KFAIGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
              + +   +      E       N+ +  +SP G  + FS   DG
Sbjct: 642 ---VRIWDVETGKPLGEPFRGHTKNVNSVAFSPDGERV-FSGSLDG 683



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 67/192 (34%), Gaps = 15/192 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           S  + SG +  ++ + D    N+         + +    FSP+ + V   + D      V
Sbjct: 587 STRIASGSLDQAIRIWDATTWNLLGEPFRGHTKGVRSLAFSPDGRSVVSGSDDQ----TV 642

Query: 240 YLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ER 296
            + D    +   +        + +  FS +G+R + S   D  + I+  D ++     E 
Sbjct: 643 RIWDVETGKPLGEPFRGHTKNVNSVAFSPDGER-VFSGSLDGIVRIW--DPKTGKQLGEP 699

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWS 355
                    S ++SPD  ++V  S  EG  +++   +      R              +S
Sbjct: 700 FRGHTKDVDSIAFSPDGERVVSGSF-EGTVRIW--DAKTGKLVRKPFQGHTDGILSVAFS 756

Query: 356 PQGDLIAFTKFS 367
           P G  +    + 
Sbjct: 757 PDGRRVVSGSYD 768



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 80/221 (36%), Gaps = 43/221 (19%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLG---------AQVLVT---GRVIKEGKDRLRV 126
           F+  S       +     I     WN LG          + L     GR +  G D   V
Sbjct: 583 FSPDSTRIASGSLDQAIRIWDATTWNLLGEPFRGHTKGVRSLAFSPDGRSVVSGSDDQTV 642

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             R+WDV+  K + G+ F     +   +A   S D                    E V S
Sbjct: 643 --RIWDVETGKPL-GEPFRGHTKNVNSVA--FSPD-------------------GERVFS 678

Query: 187 GIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           G +   + + D   G  +        + +    FSP+ ++V   +++      V + D +
Sbjct: 679 GSLDGIVRIWDPKTGKQLGEPFRGHTKDVDSIAFSPDGERVVSGSFEG----TVRIWDAK 734

Query: 246 IDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             +  ++        IL+  FS +G+R ++S   D+A+ I+
Sbjct: 735 TGKLVRKPFQGHTDGILSVAFSPDGRR-VVSGSYDQAVRIW 774


>gi|145537415|ref|XP_001454422.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422181|emb|CAK87025.1| unnamed protein product [Paramecium tetraurelia]
          Length = 326

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 52/298 (17%), Positives = 99/298 (33%), Gaps = 44/298 (14%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE--SV 184
             RLWDV   KQ                              + G   + + F S+  ++
Sbjct: 1   SIRLWDVNTGKQ--------------------------KTKIDSGFKVNTVCFSSDGTTL 34

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            SG    S+C+ D    N +      +       FSP    +AY + D      + L D 
Sbjct: 35  ASGCEYYSICLWDVKTKNQKAKLGDLNNNFRSICFSPYGMLLAYGSADK----YISLEDV 90

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFI 303
           +  +   ++    S + +  FS +               I   ++Q+   + +       
Sbjct: 91  KTRQQKAKLVGHTSYVQSLCFSLDSSTLA---SGGGDKSILLWNVQTGKLKAKFDGHSGT 147

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SPD + I   S+    + + +       QK       +      +SP G  +A 
Sbjct: 148 IYSVNFSPDGTTIASGSE---DKSIRLWDIRTGQQKAKLDGHSSQVNSICYSPDGTTLA- 203

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +        +  +KK   + +L    S + +  +SP G  L       GD+  +L+ +
Sbjct: 204 SGSDDNSIRLWDVKKGQQKAKLDGHCSKVFSVKFSPDGTKLA----SCGDSLIRLWDV 257


>gi|332709178|ref|ZP_08429145.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332352089|gb|EGJ31662.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1720

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 78/222 (35%), Gaps = 21/222 (9%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                      I+    FSP+ Q +A  + D    ++++  D    +  + I   +  + +
Sbjct: 1081 EHNRLEGHSDIVSSISFSPDGQFIASTSRD--KTVKLWHPD---GKLIQTIEGHQDSVTS 1135

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
              FS++ +    S   D  + ++    Q+    R +T       S S+S D   I   + 
Sbjct: 1136 VSFSADSQLIA-SSSWDGTVRLWR---QTGELVRTITTDAGHIYSVSFSQDGQMIA-AAG 1190

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            ++ K +L+ +        +             +S  G +IA          I +  + G+
Sbjct: 1191 KDKKIRLWTVD---GQLIKTFSGHRGVVRSVSFSRDGKIIASASADNT---IKLWSQSGT 1244

Query: 382  QERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                L    + +    +SP  + +  +     D   +L+S +
Sbjct: 1245 LLNTLRGHSAQVNCVVFSPDSQLIASASD---DQTVRLWSTN 1283



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 102/239 (42%), Gaps = 18/239 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ +  R G  I+ +   +D +L    FSP+ +++A A+ D    ++++    R
Sbjct: 1460 SGSRDGTVKLWHRSGTLIKTIKAHQDWVLNV-SFSPDSKRLASASRD--RTVKIW---DR 1513

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +    +      + A +FS + KR   S   D+ + ++S D      + L       +
Sbjct: 1514 TGKLIHTLSGHSERVNAVKFSQDSKRLA-SASDDKTVKLWSAD--GKLLKTLPGHRNWVL 1570

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              S+SPD+  +   S       L + + +G+ Q  + +    S     +SP+G ++A + 
Sbjct: 1571 DVSFSPDNKFLATASY---DNTLKLWRKDGTLQSTL-KGHTDSVAKVRFSPKGKILATSS 1626

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +   +  +     D   + L   +  +   +WS  G +L  + +   D    +++++L+
Sbjct: 1627 WDN-QVQLWRFD-DTLIKTLKAGEHRVTNLSWSHDGTALAVASE---DGTVAIWNLNLD 1680



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 80/222 (36%), Gaps = 19/222 (8%)

Query: 204  RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
              +       + +  FSP+ Q++A A+ D      V L D R  +  + +     ++ + 
Sbjct: 1395 HVILRGHQDDVQDVTFSPDSQQIATASNDR----TVKLWD-RNGKLLQTLTGHHDLVYSI 1449

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
              S++G+    S  +D  + ++         + +       ++ S+SPDS ++   S R+
Sbjct: 1450 SLSADGELIA-SGSRDGTVKLW--HRSGTLIKTIKAHQDWVLNVSFSPDSKRLASAS-RD 1505

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               +++     G     +S   E       +S     +A          + +   DG   
Sbjct: 1506 RTVKIW--DRTGKLIHTLSGHSER-VNAVKFSQDSKRLASASDDKT---VKLWSADGKLL 1559

Query: 384  RLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            + L    N     ++SP  + L  +     D   KL+  D  
Sbjct: 1560 KTLPGHRNWVLDVSFSPDNKFLATASY---DNTLKLWRKDGT 1598



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 67/174 (38%), Gaps = 14/174 (8%)

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            R+     ++ +  FS +G+    S  +D+ + ++         + +        S S+S 
Sbjct: 1084 RLEGHSDIVSSISFSPDGQFIA-STSRDKTVKLW--HPDGKLIQTIEGHQDSVTSVSFSA 1140

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            DS  I   S  +G  +L+  +  G   + I+ D    Y    +S  G +IA    +G+  
Sbjct: 1141 DSQLIA-SSSWDGTVRLW--RQTGELVRTITTDAGHIYSV-SFSQDGQMIA---AAGKDK 1193

Query: 372  AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             I +   DG   +        +++ ++S  G+ +        D   KL+S    
Sbjct: 1194 KIRLWTVDGQLIKTFSGHRGVVRSVSFSRDGKIIA---SASADNTIKLWSQSGT 1244



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 95/268 (35%), Gaps = 22/268 (8%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G++++       + + +    D + I       +   W +    I             D+
Sbjct: 1433 GKLLQTLTGHHDLVYSISLSADGELIASGSRDGTVKLWHRSGTLI------KTIKAHQDW 1486

Query: 174  NSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
               + F   S+ + S     ++ + DR G  I  L+   +++    +FS + +++A A+ 
Sbjct: 1487 VLNVSFSPDSKRLASASRDRTVKIWDRTGKLIHTLSGHSERVNAV-KFSQDSKRLASASD 1545

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D    ++++  D    +  K +   R+ +L   FS + K    +   D  + ++  D   
Sbjct: 1546 D--KTVKLWSAD---GKLLKTLPGHRNWVLDVSFSPDNKFLA-TASYDNTLKLWRKD--G 1597

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                 L           +SP    +   S      Q+ + + + +  K + +  E    +
Sbjct: 1598 TLQSTLKGHTDSVAKVRFSPKGKILATSS---WDNQVQLWRFDDTLIKTL-KAGEHRVTN 1653

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
              WS  G  +A     G   AI  +  D
Sbjct: 1654 LSWSHDGTALAVASEDGTV-AIWNLNLD 1680



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 72/422 (17%), Positives = 129/422 (30%), Gaps = 95/422 (22%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF------------- 128
            +S  +  Q I +       + W   G   LV   +  +      V F             
Sbjct: 1136 VSFSADSQLIASSSWDGTVRLWRQTG--ELVR-TITTDAGHIYSVSFSQDGQMIAAAGKD 1192

Query: 129  ---RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT---GEKGDFNSRILFVSE 182
               RLW   D + I  K F       R ++ +    I  S +     K    S  L  + 
Sbjct: 1193 KKIRLW-TVDGQLI--KTFSGHRGVVRSVSFSRDGKIIASASADNTIKLWSQSGTLLNTL 1249

Query: 183  SVVSGIIKN-------SLCVMDRDGANIRYLTPSRDQILFEP---------RFSPNQQKV 226
               S  +          L     D   +R  + +   I   P          FS + Q +
Sbjct: 1250 RGHSAQVNCVVFSPDSQLIASASDDQTVRLWSTNGKLIKTFPKHQRWVLGVAFSADGQLI 1309

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSS------------NGKR 271
            A A+ D+             +R    I  F+     + A  FS             +   
Sbjct: 1310 ASASDDN--------TVRLWNREGTLINTFKGHSDGVSAVSFSPTEPFSSQDNLAHSNSH 1361

Query: 272  ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-------------SYSPDSSQIVF 318
              +     +   +       + T +L     IN S              ++SPDS QI  
Sbjct: 1362 IPLQPSNPQTDQLILASASHDKTIKL--WSSINQSHVILRGHQDDVQDVTFSPDSQQIAT 1419

Query: 319  ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             S+      + +   NG   + ++       +    S  G+LIA     G    + +  +
Sbjct: 1420 ASN---DRTVKLWDRNGKLLQTLT-GHHDLVYSISLSADGELIASGSRDGT---VKLWHR 1472

Query: 379  DGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             G+  + +      +   ++SP  + L  + +   D   K++  D  G+   LI+T +  
Sbjct: 1473 SGTLIKTIKAHQDWVLNVSFSPDSKRLASASR---DRTVKIW--DRTGK---LIHTLSGH 1524

Query: 438  SD 439
            S+
Sbjct: 1525 SE 1526


>gi|255951074|ref|XP_002566304.1| Pc22g24150 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211593321|emb|CAP99703.1| Pc22g24150 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 409

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 78/241 (32%), Gaps = 17/241 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS  +   L   +                +   RFSP  + +A A+ D      + + D 
Sbjct: 142 VSNDMMIRLWNANTGLQRGAAKDNGHSNWVRSVRFSPTGRFLATASDDM----TIRISDV 197

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 + +      + A  FS +GK    S   D  + +++     +  + L       
Sbjct: 198 NTGFTYRMLQGHTGKVRAVAFSPDGKTLA-SASDDFTVRLWNAS-SGSLLKNLNGHSGWV 255

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + ++SPD   +   SD      + +  +   ++       ++S     +SP G L+A  
Sbjct: 256 RAVAFSPDGRTVASTSD---DNTIRIWDTTTGNEIHQLSGHQSSIRAVCFSPNGKLLASG 312

Query: 365 KFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +   + +           L      L+  T+   G  L  +     D   ++++  
Sbjct: 313 SQDKD---LRIWDTSSGAMLNVLRGHSGPLRVITFCTDGSLLASAAD---DLTIRVWAAS 366

Query: 423 L 423
           L
Sbjct: 367 L 367



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 82/220 (37%), Gaps = 17/220 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +++   S N Q +A  + D   ++R++  +T + R   +     + + + RF
Sbjct: 119 TLDGHTGFIWDVALSGNSQILASVSNDM--MIRLWNANTGLQRGAAKDNGHSNWVRSVRF 176

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREG 324
           S  G+    +    + M I   D+ +  T R+       + A ++SPD   +   SD   
Sbjct: 177 SPTGRFLATAS---DDMTIRISDVNTGFTYRMLQGHTGKVRAVAFSPDGKTLASASD--- 230

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE- 383
              + +  ++     +             +SP G  +A T        I +       E 
Sbjct: 231 DFTVRLWNASSGSLLKNLNGHSGWVRAVAFSPDGRTVASTSDDNT---IRIWDTTTGNEI 287

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +L    S+++A  +SP+G+ L    +   D   +++   
Sbjct: 288 HQLSGHQSSIRAVCFSPNGKLLASGSQ---DKDLRIWDTS 324



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 74/225 (32%), Gaps = 11/225 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     ++ + D +      +       +    FSP+ + +A A+ D      V L +  
Sbjct: 185 TASDDMTIRISDVNTGFTYRMLQGHTGKVRAVAFSPDGKTLASASDD----FTVRLWNAS 240

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                K +      + A  FS +G+    S   D  + I+      N   +L+       
Sbjct: 241 SGSLLKNLNGHSGWVRAVAFSPDGRTVA-STSDDNTIRIWDT-TTGNEIHQLSGHQSSIR 298

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  +SP+   +   S     + L +  ++      + +          +   G L+A + 
Sbjct: 299 AVCFSPNGKLLASGSQ---DKDLRIWDTSSGAMLNVLRGHSGPLRVITFCTDGSLLA-SA 354

Query: 366 FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
                  +     + +  R+L      ++A T S   +  +++  
Sbjct: 355 ADDLTIRVWAASLEFACVRVLTGYSGWVRAMTLSCDEKMAVYTSD 399



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 78/251 (31%), Gaps = 35/251 (13%)

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSL--GAQVLVT---GRVIKEGKDRLRVEFRL 130
           +  F   + D    +I++ ++   ++         + +     G+ +    D   V  RL
Sbjct: 179 TGRFLATASDDMTIRISDVNTGFTYRMLQGHTGKVRAVAFSPDGKTLASASDDFTV--RL 236

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           W+      +  K         R +A   S D                     +V S    
Sbjct: 237 WNASSGSLL--KNLNGHSGWVRAVA--FSPD-------------------GRTVASTSDD 273

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N++ + D    N  +        +    FSPN + +A  + D      + + DT      
Sbjct: 274 NTIRIWDTTTGNEIHQLSGHQSSIRAVCFSPNGKLLASGSQDK----DLRIWDTSSGAML 329

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             +      +    F ++G     S   D  + +++  L+      LT       + + S
Sbjct: 330 NVLRGHSGPLRVITFCTDGSLLA-SAADDLTIRVWAASLEFACVRVLTGYSGWVRAMTLS 388

Query: 311 PDSSQIVFESD 321
            D    V+ SD
Sbjct: 389 CDEKMAVYTSD 399


>gi|317503118|ref|ZP_07961190.1| prolyl oligopeptidase [Prevotella salivae DSM 15606]
 gi|315665768|gb|EFV05363.1| prolyl oligopeptidase [Prevotella salivae DSM 15606]
          Length = 721

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 79/242 (32%), Gaps = 63/242 (26%)

Query: 258 SMILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I A   S +GK+ +         Q      +Y  D+      +LT+       A++  
Sbjct: 47  GRIGASTASPDGKQIVYQVTYYSVAQNKSHTILYIQDINGKNKRQLTSDNKSESDATWIE 106

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------ 365
              +I F   R+G  +++VM  +G+++K++S   E +     +SP    + + K      
Sbjct: 107 SGKRIAFL--RDG--EIWVMSPDGNNRKQLSH-TEGAIEGFSFSPDEKKVVYIKSIPYHG 161

Query: 366 -------------------FSGEKFAIGVMKKDGSQERLLVEDS-----------NLQAP 395
                               +   +   V          + ++              +AP
Sbjct: 162 TIRETPSDLPKATGLLITDMNYRHWDHYVQTIAHPFVANITQEGIQEGKDIMQGQPFEAP 221

Query: 396 ----------TWSPSGRSLIFSRKKDGD------TGSKLYSIDLNGRNETLINTPAYASD 439
                      WS   + + ++ +K         T + +Y  D+N  +   +  PA   +
Sbjct: 222 VAPFGGIEQIAWSTDSKYIAYTSRKKEGTQYAISTDTDIYLYDINNGSTINLCKPANYQE 281

Query: 440 PQ 441
           P+
Sbjct: 282 PE 283



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 91/308 (29%), Gaps = 92/308 (29%)

Query: 220 SPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ +++ Y     +        +  +     +  +++ +         +  +GKR    
Sbjct: 55  SPDGKQIVYQVTYYSVAQNKSHTILYIQDINGKNKRQLTSDNKSESDATWIESGKRIAF- 113

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------------SDR 322
             +D   +I+ +    N  ++L++T       S+SPD  ++V+              SD 
Sbjct: 114 -LRDG--EIWVMSPDGNNRKQLSHTEGAIEGFSFSPDEKKVVYIKSIPYHGTIRETPSDL 170

Query: 323 EGKEQLYVMQSNGSD------------QKRISQDK-------------------EASYFD 351
                L +   N                  I+Q+                          
Sbjct: 171 PKATGLLITDMNYRHWDHYVQTIAHPFVANITQEGIQEGKDIMQGQPFEAPVAPFGGIEQ 230

Query: 352 PVWSPQGDLIAFTKF--SGEKF------AIGVMKKDGSQERLLVEDSNLQA--------- 394
             WS     IA+T     G ++       I +   +      L + +N Q          
Sbjct: 231 IAWSTDSKYIAYTSRKKEGTQYAISTDTDIYLYDINNGSTINLCKPANYQEPEIDATKTM 290

Query: 395 -------------------PTWSPSGRSLIFSRKKDGDTGS---KLYSIDL-NGRNETLI 431
                              P +SP G+ + +   K     S   +L  ++L  G+   LI
Sbjct: 291 KDQAVNHQQGDMQVGYDTNPKFSPDGKYIAWQSMKHDGYESDLNRLCIMELSTGKKYYLI 350

Query: 432 NTPAYASD 439
           +   + S+
Sbjct: 351 DKGNFDSN 358



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 58/363 (15%), Positives = 114/363 (31%), Gaps = 85/363 (23%)

Query: 135 DRKQIIGK-KFFSSPASWRKIAHTISDDIY---QSITGEKGDFNSRILFVSESVVSGIIK 190
           D KQI+ +  ++S   +       I D      + +T +    +      S   ++ +  
Sbjct: 57  DGKQIVYQVTYYSVAQNKSHTILYIQDINGKNKRQLTSDNKSESDATWIESGKRIAFLRD 116

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY------------ATYDDEDILR 238
             + VM  DG N + L+ +   I     FSP+++KV Y               D      
Sbjct: 117 GEIWVMSPDGNNRKQLSHTEGAIEGF-SFSPDEKKVVYIKSIPYHGTIRETPSDLPKATG 175

Query: 239 VYLMDTR---IDRAPKRIGNFRSMIL---------------------AP-------RFSS 267
           + + D      D   + I +     +                     AP        +S+
Sbjct: 176 LLITDMNYRHWDHYVQTIAHPFVANITQEGIQEGKDIMQGQPFEAPVAPFGGIEQIAWST 235

Query: 268 NGKRALISVQKDEAM--------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + K    + +K E          DIY  D+ + +T  L                      
Sbjct: 236 DSKYIAYTSRKKEGTQYAISTDTDIYLYDINNGSTINL-CKPANYQEPEI---------- 284

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IG 374
            D     +   +     D +           +P +SP G  IA+     + +      + 
Sbjct: 285 -DATKTMKDQAVNHQQGDMQV------GYDTNPKFSPDGKYIAWQSMKHDGYESDLNRLC 337

Query: 375 VMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +M+    ++  L++    DSN++   W+   +S+ F           +Y   L G+ + L
Sbjct: 338 IMELSTGKKYYLIDKGNFDSNVEQYVWANDSKSVYFLGC--WHACINVYQASLTGKIKQL 395

Query: 431 INT 433
            + 
Sbjct: 396 TDG 398



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE------DILRVYLMDTRIDRAPKR 252
           D A        +      P+FSP+ + +A+ +   +      + L +  + T        
Sbjct: 292 DQAVNHQQGDMQVGYDTNPKFSPDGKYIAWQSMKHDGYESDLNRLCIMELSTGKKYYLID 351

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            GNF S +    ++++ K           +++Y   L +   ++LT+  +
Sbjct: 352 KGNFDSNVEQYVWANDSKSVYFLGCWHACINVYQASL-TGKIKQLTDGWY 400


>gi|148270925|ref|YP_001245385.1| hypothetical protein Tpet_1809 [Thermotoga petrophila RKU-1]
 gi|281413206|ref|YP_003347285.1| WD40 domain protein beta Propeller [Thermotoga naphthophila RKU-10]
 gi|147736469|gb|ABQ47809.1| hypothetical protein Tpet_1809 [Thermotoga petrophila RKU-1]
 gi|281374309|gb|ADA67871.1| WD40 domain protein beta Propeller [Thermotoga naphthophila RKU-10]
          Length = 389

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 95/262 (36%), Gaps = 14/262 (5%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y     E  DF+SR L  S   +SG     L +  ++G  +        +  + PR SP+
Sbjct: 132 YHPALDEYCDFSSRYLVFSSERLSGNRNLFL-IDRQNGELLPMPIYGSSE--YFPRISPD 188

Query: 223 QQKVAYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++ + +      +    Y+ +     +  + I   R     P +  +    +   +   +
Sbjct: 189 ERYLLFQGSLHGNWNIYYMPLSPDYSKKIQLISRGRYASYNPNW-IDNNTVVYVQEDATS 247

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +   DL +   +  T  L  +   + +  +  IVF   +E    +Y +  +G+    +
Sbjct: 248 NHLVVKDLTTMKEK--TYYLPFDWVFTPAKGNQGIVFVGLKESNFGIYELLPDGTIT--V 303

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSP 399
            +D   + FDP      + + F+      F I        +   L E    +   P +S 
Sbjct: 304 LEDSPYNEFDPDV--FENYLIFSSNRDGVFRIYAKDLVSGKVWCLTENIPYDAFYPAFSE 361

Query: 400 SGRSLIFSRKKDGDTGSKLYSI 421
            G+ + FS    G +   ++ +
Sbjct: 362 DGKLVAFSVYSKG-SEPDIWIV 382



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 92/232 (39%), Gaps = 28/232 (12%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + + +++        ++L+D R +     +  + S    PR S + +  L         +
Sbjct: 145 RYLVFSSERLSGNRNLFLID-RQNGELLPMPIYGSSEYFPRISPDERYLLFQGSLHGNWN 203

Query: 284 IYSVDLQ---SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           IY + L    S   + ++   + + + ++  D++ +V+  +      L V          
Sbjct: 204 IYYMPLSPDYSKKIQLISRGRYASYNPNWI-DNNTVVYVQEDATSNHLVVKD-------- 254

Query: 341 ISQDKEASYFDP---VWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           ++  KE +Y+ P   V++P      I F       F I  +  DG+   +L +    +  
Sbjct: 255 LTTMKEKTYYLPFDWVFTPAKGNQGIVFVGLKESNFGIYELLPDGT-ITVLEDSPYNE-- 311

Query: 396 TWSPS--GRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI-NTPAYASDPQWV 443
            + P      LIFS  +DG    ++Y+ DL +G+   L  N P  A  P + 
Sbjct: 312 -FDPDVFENYLIFSSNRDG--VFRIYAKDLVSGKVWCLTENIPYDAFYPAFS 360


>gi|17228439|ref|NP_484987.1| hypothetical protein alr0944 [Nostoc sp. PCC 7120]
 gi|17130290|dbj|BAB72901.1| alr0944 [Nostoc sp. PCC 7120]
          Length = 173

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 51/125 (40%), Gaps = 3/125 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDREGK 325
           G+  + +  +  + D+Y  D  +     L     ++      S S D   +VF + R+G+
Sbjct: 49  GRYIVFTSDRRGSQDVYMFDTLTRNLVDLPGLNALDTIASHPSVSADGRYVVFAASRQGR 108

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             +++        + ++ + +A   +P  S  G+ IAF   +  ++ + V  + G    +
Sbjct: 109 SAIFLYDRETRQSRSLTNNLQAEVRNPTISTDGNAIAFESSNNGQWDVLVYNRSGQPVNV 168

Query: 386 LVEDS 390
             +  
Sbjct: 169 PQDPR 173



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 4/117 (3%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALISVQKD 279
           + + + + + D      VY+ DT         G     ++   P  S++G+  + +  + 
Sbjct: 48  SGRYIVFTS-DRRGSQDVYMFDTLTRNLVDLPGLNALDTIASHPSVSADGRYVVFAASRQ 106

Query: 280 EAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               I+  D ++  +  LTN L   + + + S D + I FES   G+  + V   +G
Sbjct: 107 GRSAIFLYDRETRQSRSLTNNLQAEVRNPTISTDGNAIAFESSNNGQWDVLVYNRSG 163



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 56/159 (35%), Gaps = 10/159 (6%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               + S            N+L   ++   S     IVF SDR G + +Y+  +   +  
Sbjct: 20  GYPRLVSYPFDPGGRS--INSLASELNPQSS--GRYIVFTSDRRGSQDVYMFDTLTRNLV 75

Query: 340 RISQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--P 395
            +      +     P  S  G  + F      + AI +  ++  Q R L  +   +   P
Sbjct: 76  DLPGLNALDTIASHPSVSADGRYVVFAASRQGRSAIFLYDRETRQSRSLTNNLQAEVRNP 135

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           T S  G ++ F    +G     +Y  + +G+   +   P
Sbjct: 136 TISTDGNAIAFESSNNGQWDVLVY--NRSGQPVNVPQDP 172



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 41/124 (33%), Gaps = 13/124 (10%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  +L     +   +   S +  AS  +P  S  G  I FT        + +        
Sbjct: 20  GYPRLVSYPFDPGGR---SINSLASELNPQSS--GRYIVFTSDRRGSQDVYMFDTLTRNL 74

Query: 384 RLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYA 437
             L      D+    P+ S  GR ++F+  + G +   LY  D   R    +     A  
Sbjct: 75  VDLPGLNALDTIASHPSVSADGRYVVFAASRQGRSAIFLY--DRETRQSRSLTNNLQAEV 132

Query: 438 SDPQ 441
            +P 
Sbjct: 133 RNPT 136


>gi|58427650|gb|AAW76687.1| alanyl dipeptidyl peptidase [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 749

 Score = 77.8 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 10/114 (8%)

Query: 260 ILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYS 310
           + +P  S +G   L       +     A  ++  +L++      +RLT   +   S ++S
Sbjct: 79  VSSPTLSPDGSVVLFAKRQAKTANGTSATSLWVRNLRTRDVSPPKRLTPEGWNVNSPAFS 138

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           PD   + F S + G +QLY     G   ++++        +   SP G  I F+
Sbjct: 139 PDGKTVYFLSSKTGSQQLYAQPMAGGTPQQLT-AFAVDVDNYKLSPDGKRIVFS 191



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 88/274 (32%), Gaps = 51/274 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   V +A    +         L V  + TR    PKR+      + +P FS
Sbjct: 79  VSSPTLSPDGSVVLFAKRQAKTANGTSATSLWVRNLRTRDVSPPKRLTPEGWNVNSPAFS 138

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y+  +     ++LT       +   SPD  +IVF +   G  
Sbjct: 139 PDGKTVYFLSSKTGSQQLYAQPMAGGTPQQLTAFAVDVDNYKLSPDGKRIVFSA---GVF 195

Query: 327 QLYVMQSNGSDQK----------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           Q        + +K           +  D+        W+       F        A  V+
Sbjct: 196 QDCGSDLGCTKKKLGELKNHKASGVVYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVV 255

Query: 377 KKDGSQERLLVED-----SNLQAPTWSPSGRSLIFS--------------RKKDG----- 412
                   L  +            TWSP G S++ S               K  G     
Sbjct: 256 GASAISATLAGDAPSKPFGGNDDYTWSPDGASVVASVRIPQSYGTEAGKNTKAGGKPTGN 315

Query: 413 ----DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                T   LY +D +G++  +  T   AS+P W
Sbjct: 316 DEPWQTNFDLYRLDASGKSAPVNLT---ASNPAW 346



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 102/331 (30%), Gaps = 66/331 (19%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R +    S  ++Q    + G    ++  +     SG++ + L V   D  N
Sbjct: 178 NYKLSPDGKRIV---FSAGVFQDCGSDLGCTKKKLGELKNHKASGVVYDQLFVRHWDTWN 234

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSM 259
                              + ++      +        ++         A          
Sbjct: 235 -------------------DGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGG 275

Query: 260 ILAPRFSSNGKRALISVQKDE-------------------------AMDIYSVDLQSNA- 293
                +S +G   + SV+  +                           D+Y +D    + 
Sbjct: 276 NDDYTWSPDGASVVASVRIPQSYGTEAGKNTKAGGKPTGNDEPWQTNFDLYRLDASGKSA 335

Query: 294 TERLT-NTLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQD 344
              LT +    +    +S D   +         FE+DR G   L  M       + I+  
Sbjct: 336 PVNLTASNPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFG---LMAMDVPSGKTREIAPT 392

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S  + V S  G  +  +     +  +  +     +   LV + ++ APT +  G +L
Sbjct: 393 WDRSAGEIVLSEDGSSLYTSADDLGEHPLFKIAIASGEATRLVGEGSVHAPTLA--GNTL 450

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            F+R     +G +++  D  G+    I+  A
Sbjct: 451 AFTRS-SLKSGDQVFVSDTQGQGLRAISQSA 480



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 88/303 (29%), Gaps = 61/303 (20%)

Query: 183 SVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +G    SL V +   RD +  + LTP    +   P FSP+ + V + +       + 
Sbjct: 99  KTANGTSATSLWVRNLRTRDVSPPKRLTPEGWNVN-SPAFSPDGKTVYFLSSKTGS--QQ 155

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL--QSNATERL 297
                     P+++  F   +   + S +GKR + S            DL         L
Sbjct: 156 LYAQPMAGGTPQQLTAFAVDVDNYKLSPDGKRIVFSA---GVFQDCGSDLGCTKKKLGEL 212

Query: 298 TNTLFINI---------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-- 346
            N     +           +++      +F ++             G+     +   +  
Sbjct: 213 KNHKASGVVYDQLFVRHWDTWNDGRRNTLFVAE---LPAAGAKAVVGASAISATLAGDAP 269

Query: 347 ----ASYFDPVWSPQGDLIAFTKFSG-------------------------EKFAIGVMK 377
                   D  WSP G  +  +                               F +  + 
Sbjct: 270 SKPFGGNDDYTWSPDGASVVASVRIPQSYGTEAGKNTKAGGKPTGNDEPWQTNFDLYRLD 329

Query: 378 KDG-SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDL-NGRNETL 430
             G S    L     +    P +S  G++L +   K     +    L ++D+ +G+   +
Sbjct: 330 ASGKSAPVNLTASNPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVPSGKTREI 389

Query: 431 INT 433
             T
Sbjct: 390 APT 392


>gi|125547561|gb|EAY93383.1| hypothetical protein OsI_15178 [Oryza sativa Indica Group]
          Length = 470

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 46/267 (17%), Positives = 84/267 (31%), Gaps = 31/267 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL---FEPRF 219
           + + T         ++ V+  +     ++   +   D  N  +            F P  
Sbjct: 163 FHAFTPAASPGAPGLVAVATRLAGSDYRHIEVIDMSDDKNAYFEVTRPVAPRVHRFNPFI 222

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +  +V Y            L+     ++P     F    +   F  +   A  S    
Sbjct: 223 SLDGARVGYHQCWGRGNGDSPLL-LENIKSPGPADTFSLFRIDGSFPPSRTTARRSRSSG 281

Query: 280 -----EAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLY 329
                   ++Y +D +        RLT   + +   ++SP    I F SDR   G     
Sbjct: 282 CRGCRGHKNLYIMDAKDGEAGGIRRLTEGPWSDTMCNWSPHDEWIAFASDRHAPGSGSFA 341

Query: 330 VM-QSNGSDQKRISQDKEASYFDPVW-SPQGDLIAFTK----------FSGEKF----AI 373
           +M   NG+  +R+    +    +  W S     + FT            +   +     I
Sbjct: 342 IMVHPNGTGLRRVVHSGDGGRTNHPWFSSDFKSLVFTSDYAAVSAEPVSNPHHYQPYGEI 401

Query: 374 GVMKKDGSQERLLVEDSNLQA-PTWSP 399
             +  DGS  R L  +S     P+W+P
Sbjct: 402 YTVDIDGSNIRRLTHNSFEDGTPSWTP 428



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 24/147 (16%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFS----GEKFAIGVMK 377
           G + LY+M +   +   I +  E  + D    WSP  + IAF           FAI ++ 
Sbjct: 287 GHKNLYIMDAKDGEAGGIRRLTEGPWSDTMCNWSPHDEWIAFASDRHAPGSGSFAI-MVH 345

Query: 378 KDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDG------------DTGSKLYSID 422
            +G+  R +V   +      P +S   +SL+F+                     ++Y++D
Sbjct: 346 PNGTGLRRVVHSGDGGRTNHPWFSSDFKSLVFTSDYAAVSAEPVSNPHHYQPYGEIYTVD 405

Query: 423 LNGRNETLINTPAY-ASDPQWVG-FMD 447
           ++G N   +   ++    P W   F+D
Sbjct: 406 IDGSNIRRLTHNSFEDGTPSWTPYFLD 432


>gi|115378342|ref|ZP_01465507.1| WD-repeat protein [Stigmatella aurantiaca DW4/3-1]
 gi|310825401|ref|YP_003957759.1| wd-repeat containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|115364655|gb|EAU63725.1| WD-repeat protein [Stigmatella aurantiaca DW4/3-1]
 gi|309398473|gb|ADO75932.1| WD-repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1134

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 107/321 (33%), Gaps = 59/321 (18%)

Query: 114 GRVIKEGKDRLRV-------EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           G++ +    R  +         +LWD++                 R + H          
Sbjct: 592 GQLKRSPNGRYVLVHSLRQPRAQLWDLERGTS-------------RTLEH--------GG 630

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T     F+     + ++ V+G    +L   D      R +   +  IL+   FSP+ +++
Sbjct: 631 TIRSLAFSP----LGDTAVTGGEDQTLRQWDVRTGQGR-VLGEKLGILWAVAFSPDGKQL 685

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A          +V L +    +  + +G     +    FS +G+R   S   D    ++ 
Sbjct: 686 A----AGNGDGQVRLWELATGQ-GRLLGQHDGRVNRLAFSPDGQRLA-SGSDDRTARVWE 739

Query: 287 VDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
               S    R+ +     +   +++PD  ++   S  +G  +++ +    +   R+    
Sbjct: 740 ---PSTGLSRVLHGHTSAVHPIAFTPDGKRLA-VSGYDGTARIFTLS---TAVDRVLAKA 792

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSG 401
                    SP G  +A     G    + ++        LL     E +      +SP G
Sbjct: 793 PTPLHTLAVSPGGRHLAVAGTDGS---LRLINASTGTFHLLEAPAPEGARKDPLAFSPEG 849

Query: 402 RSLIFSRKKDGDTGSKLYSID 422
           R L       G  G +++  D
Sbjct: 850 RWLA-----RGGPGGRIHLWD 865



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 85/258 (32%), Gaps = 31/258 (12%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D       T      +    FSP             +   +   D R  +  + +G   
Sbjct: 616 WDLERGTSRTLEHGGTIRSLAFSPLGD----TAVTGGEDQTLRQWDVRTGQ-GRVLGEKL 670

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            ++ A  FS +GK+   +   D  + ++   L +     L          ++SPD  ++ 
Sbjct: 671 GILWAVAFSPDGKQLA-AGNGDGQVRLWE--LATGQGRLLGQHDGRVNRLAFSPDGQRLA 727

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             SD    ++   +    +   R+     ++     ++P G  +A + + G      +  
Sbjct: 728 SGSD----DRTARVWEPSTGLSRVLHGHTSAVHPIAFTPDGKRLAVSGYDGTA---RIFT 780

Query: 378 KDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-- 434
              + +R+L +          SP GR L  +      T   L  I+ +     L+  P  
Sbjct: 781 LSTAVDRVLAKAPTPLHTLAVSPGGRHLAVA-----GTDGSLRLINASTGTFHLLEAPAP 835

Query: 435 --------AYASDPQWVG 444
                   A++ + +W+ 
Sbjct: 836 EGARKDPLAFSPEGRWLA 853



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 96/272 (35%), Gaps = 16/272 (5%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDI--YQSITGEKGDFNSRILFVSESVVSGII 189
           D  +RKQ+  +   S   + R++A   +D++    +    + D N  I ++         
Sbjct: 380 DRAERKQVEAEAARSDAENTRQLALERADELTLLHARAAVEKDPNEAIAWLRSLSPHFTR 439

Query: 190 KNSLCVMDRDGA--NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             ++ ++  D     +  +     Q L +  F+ + +++  ++ D    +RV+ ++    
Sbjct: 440 WPAVRILAADAQSRGLATVLRGHTQTLDDMAFTRDGRRLVSSSDD--HTVRVWELE---R 494

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              + +      +     S + +R   +  KD    ++ +D  +  ++            
Sbjct: 495 GESRVLSGHTDEVWRLVLSPD-QRFAATASKDRTARLWELD--TGKSQVFAGHAGAVDGI 551

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + +PD   ++  S+R G + L +        +R              SP G  +      
Sbjct: 552 ALTPDGRHLL-TSNR-GDDLLRLWNVATGALERTFATGMGPLGQLKRSPNGRYVLVHSLR 609

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
             +  +     +    R L     +++  +SP
Sbjct: 610 QPRAQLW--DLERGTSRTLEHGGTIRSLAFSP 639



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/351 (13%), Positives = 103/351 (29%), Gaps = 58/351 (16%)

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-------------VIKE 119
           L+       ++                 + W+    Q  V G                + 
Sbjct: 626 LEHGGTIRSLAFSPLGDTAVTGGEDQTLRQWDVRTGQGRVLGEKLGILWAVAFSPDGKQL 685

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                  + RLW++   +   G+          ++A   S D  Q +     D  +R+  
Sbjct: 686 AAGNGDGQVRLWELATGQ---GRLLGQHDGRVNRLA--FSPD-GQRLASGSDDRTARVWE 739

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            S  +                     +       +    F+P+ +++A + YD     R+
Sbjct: 740 PSTGLSR-------------------VLHGHTSAVHPIAFTPDGKRLAVSGYD--GTARI 778

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-- 297
           + + T +D   + +    + +     S  G+   ++        +  ++  +     L  
Sbjct: 779 FTLSTAVD---RVLAKAPTPLHTLAVSPGGRHLAVAGTDG---SLRLINASTGTFHLLEA 832

Query: 298 TNTLFINISA-SYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                      ++SP+   +     R G   ++++  S      R  +   A      +S
Sbjct: 833 PAPEGARKDPLAFSPEGRWLA----RGGPGGRIHLWDSASGQALRPLEGHLAPLSALTFS 888

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
             G  +A     GE   + +   D  Q   L      +Q  T+SP G  L 
Sbjct: 889 RDGRQLASADMGGE---VRLWDLDSGQAHSLGWHTGAVQRLTFSPDGNQLA 936



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 60/174 (34%), Gaps = 14/174 (8%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP  + +A          R++L D+   +A + +    + + A  FS +G++   S  
Sbjct: 844  AFSPEGRWLA----RGGPGGRIHLWDSASGQALRPLEGHLAPLSALTFSRDGRQLA-SAD 898

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                + ++  DL S     L          ++SPD +Q+   S       +         
Sbjct: 899  MGGEVRLW--DLDSGQAHSLGWHTGAVQRLTFSPDGNQLASGS---ADTTIRRWDLTQGG 953

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             + + +  E +    V+S  G  +      G    + +      Q + +    N
Sbjct: 954  FQEL-RAHEDAVGALVFSSDGQQLV---SGGMDHTLRLWDLTRGQGQRVDVSGN 1003



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 50/244 (20%), Positives = 91/244 (37%), Gaps = 32/244 (13%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP- 263
            L    D  +    FSP+ Q++A  + D     RV+   T +     R+ +  +  + P 
Sbjct: 705 RLLGQHDGRVNRLAFSPDGQRLASGSDD--RTARVWEPSTGLS----RVLHGHTSAVHPI 758

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            F+ +GKR  +S   D    I++  L +     L        + + SP    +   +  +
Sbjct: 759 AFTPDGKRLAVSG-YDGTARIFT--LSTAVDRVLAKAPTPLHTLAVSPGGRHLA-VAGTD 814

Query: 324 GKEQLYVMQSNGSDQKRI-SQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           G   L ++ ++      + +   E +  DP  +SP+G  +A     G    I +      
Sbjct: 815 GS--LRLINASTGTFHLLEAPAPEGARKDPLAFSPEGRWLA---RGGPGGRIHLWDSASG 869

Query: 382 QERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---------NGRNETL 430
           Q    +E       A T+S  GR L  S    G+   +L+ +D           G  + L
Sbjct: 870 QALRPLEGHLAPLSALTFSRDGRQLA-SADMGGEV--RLWDLDSGQAHSLGWHTGAVQRL 926

Query: 431 INTP 434
             +P
Sbjct: 927 TFSP 930



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 71/259 (27%), Gaps = 51/259 (19%)

Query: 168  GEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
              +G     + F  E      G     + + D                L    FS + ++
Sbjct: 834  APEGARKDPLAFSPEGRWLARGGPGGRIHLWDSASGQALRPLEGHLAPLSALTFSRDGRQ 893

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +A  + D    +R++ +D+    +   +G     +    FS +G +   S   D  +  +
Sbjct: 894  LA--SADMGGEVRLWDLDSGQAHS---LGWHTGAVQRLTFSPDGNQLA-SGSADTTIRRW 947

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQIVF------------------ESDREGKEQ 327
              DL     + L        +  +S D  Q+V                     D  G   
Sbjct: 948  --DLTQGGFQELRAHEDAVGALVFSSDGQQLVSGGMDHTLRLWDLTRGQGQRVDVSGNGV 1005

Query: 328  LYVMQSNG--------------------SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            L ++ + G                           +           SP G  +A     
Sbjct: 1006 LELLLAPGERLISASLKDSMVRRWEGRTGQALPPLRGHRGDITALALSPDGRRLASAS-- 1063

Query: 368  GEKFAIGVMKKDGSQERLL 386
             E   + +   +  + R+L
Sbjct: 1064 -EDRTVRLWDLESGESRVL 1081



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 85/224 (37%), Gaps = 35/224 (15%)

Query: 127  EFRLWDVKDRK-------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----- 174
            E RLWD+   +           ++   SP    ++A   +D   +     +G F      
Sbjct: 902  EVRLWDLDSGQAHSLGWHTGAVQRLTFSPDGN-QLASGSADTTIRRWDLTQGGFQELRAH 960

Query: 175  ----SRILFVS--ESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQK 225
                  ++F S  + +VSG + ++L + D     G  +        ++L  P      ++
Sbjct: 961  EDAVGALVFSSDGQQLVSGGMDHTLRLWDLTRGQGQRVDVSGNGVLELLLAP-----GER 1015

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +  A+  D  + R    + R  +A   +   R  I A   S +G+R   S  +D  + ++
Sbjct: 1016 LISASLKDSMVRR---WEGRTGQALPPLRGHRGDITALALSPDGRRLA-SASEDRTVRLW 1071

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              DL+S  +  L           +  D   +V  S+ +G  +L+
Sbjct: 1072 --DLESGESRVLRGHTARVTGVGFLND-QTLVSTSE-DGTVRLW 1111


>gi|301309002|ref|ZP_07214947.1| putative Cytochrome c binding protein [Bacteroides sp. 20_3]
 gi|300833028|gb|EFK63653.1| putative Cytochrome c binding protein [Bacteroides sp. 20_3]
          Length = 488

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 84/266 (31%), Gaps = 60/266 (22%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             T         P + P  + +AY+T +             +      + +  S ++   
Sbjct: 209 TKTDQTIAACVYPYWHPGGEYIAYSTNNTRQSFH------TVKDERVEVLDLESDVV--V 260

Query: 265 FSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-- 320
           +     R L+  S+QK +                           ++SPD   + F S  
Sbjct: 261 YHPADHRLLLCDSLQKKDRF---------------------ETFPAFSPDGRTLYFCSAE 299

Query: 321 -------DREGKEQLYVMQSN---GSDQKRISQDKEA-----SYFDPVWSPQGDLIAFTK 365
                   +E +  L  +  +   G+   RI     A     S   P  S  G  I FT 
Sbjct: 300 AKKIPEEYKEIRYNLCSIDFDPSAGTFGSRIDTLVNAEALGKSVSFPRPSYDGKYIMFTL 359

Query: 366 FSGEKFAIG-------VMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTG 415
                F+I        ++       R L E ++    +   WS + R  +FS ++     
Sbjct: 360 SDYGNFSIWHKEADLWLLDLTSGDLRKLSEVNSDDTESFHNWSSNSRWFVFSSRRGDGLY 419

Query: 416 SKLY--SIDLNGRNETLINTPAYASD 439
           ++LY  S+D NG+       P    +
Sbjct: 420 TRLYLASMDENGKISKPFLLPQEDPE 445



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 65/186 (34%), Gaps = 35/186 (18%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGN- 255
              +D+    P FSP+ + + + + + + I   Y            D        RI   
Sbjct: 274 LQKKDRFETFPAFSPDGRTLYFCSAEAKKIPEEYKEIRYNLCSIDFDPSAGTFGSRIDTL 333

Query: 256 -----FRSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLFI 303
                    +  PR S +GK  + ++             D++ +DL S    +L+     
Sbjct: 334 VNAEALGKSVSFPRPSYDGKYIMFTLSDYGNFSIWHKEADLWLLDLTSGDLRKLSEVNSD 393

Query: 304 NIS--ASYSPDSSQIVFESDREGK--EQLYV--MQSNGSDQKRIS---QDKEASYFDPVW 354
           +     ++S +S   VF S R      +LY+  M  NG   K      +D E  Y   V+
Sbjct: 394 DTESFHNWSSNSRWFVFSSRRGDGLYTRLYLASMDENGKISKPFLLPQEDPETYYDRSVY 453

Query: 355 S---PQ 357
           S   P 
Sbjct: 454 SYNVPD 459


>gi|242769315|ref|XP_002341744.1| taf5, putative [Talaromyces stipitatus ATCC 10500]
 gi|218724940|gb|EED24357.1| taf5, putative [Talaromyces stipitatus ATCC 10500]
          Length = 951

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 69/188 (36%), Gaps = 14/188 (7%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           FSP   K+   +       I +   +++      + +      + A  FS NG+    S 
Sbjct: 724 FSPITSKIRNIHINKLHYWIQKFPEVESAWSAELQTLEGDSGPVYAVAFSPNGRLLA-SS 782

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNG 335
             D+ + ++  D  + + ++       ++ A ++SPD   +   SD    + + +  ++ 
Sbjct: 783 SNDKTVKLW--DAATKSLQQTLEGHSDSVGAVTFSPDGRLVASCSD---DKTIKLWDADT 837

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-- 393
              ++  +          +SP G L+A          + +        +  ++D  +   
Sbjct: 838 GSLQQTLEGHSDWIRAVAFSPDGRLVASGSRDKT---VKLWDPTTGSLQQTLDDRPVWAR 894

Query: 394 APTWSPSG 401
           A  +SP G
Sbjct: 895 AAMFSPEG 902



 Score = 65.8 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 60/155 (38%), Gaps = 11/155 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    ++   FSPN + +A ++ D      V L D       + +      + A  
Sbjct: 758 QTLEGDSGPVYAVAFSPNGRLLASSSNDK----TVKLWDAATKSLQQTLEGHSDSVGAVT 813

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G R + S   D+ + ++  D  + + ++ L        + ++SPD   +   S R+
Sbjct: 814 FSPDG-RLVASCSDDKTIKLW--DADTGSLQQTLEGHSDWIRAVAFSPDGRLVASGS-RD 869

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              +L+         ++   D+       ++SP+G
Sbjct: 870 KTVKLW--DPTTGSLQQTLDDRPVWARAAMFSPEG 902



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 11/156 (7%)

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           S   + L        + ++SP+   +   S+    + + +  +     ++  +    S  
Sbjct: 754 SAELQTLEGDSGPVYAVAFSPNGRLLASSSN---DKTVKLWDAATKSLQQTLEGHSDSVG 810

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSR 408
              +SP G L+A          I +   D    +  +E  +    A  +SP GR +    
Sbjct: 811 AVTFSPDGRLVASCSDDKT---IKLWDADTGSLQQTLEGHSDWIRAVAFSPDGRLVASGS 867

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +   D   KL+        +TL + P +A    +  
Sbjct: 868 R---DKTVKLWDPTTGSLQQTLDDRPVWARAAMFSP 900



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 51/129 (39%), Gaps = 8/129 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D    +++         +    FSP+ + VA  + D      + L D  
Sbjct: 781 SSSNDKTVKLWDAATKSLQQTLEGHSDSVGAVTFSPDGRLVASCSDDK----TIKLWDAD 836

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                + +      I A  FS +G R + S  +D+ + ++  D  + + ++ L +     
Sbjct: 837 TGSLQQTLEGHSDWIRAVAFSPDG-RLVASGSRDKTVKLW--DPTTGSLQQTLDDRPVWA 893

Query: 305 ISASYSPDS 313
            +A +SP+ 
Sbjct: 894 RAAMFSPEG 902


>gi|17233144|ref|NP_490234.1| hypothetical protein all7128 [Nostoc sp. PCC 7120]
 gi|17135666|dbj|BAB78212.1| all7128 [Nostoc sp. PCC 7120]
          Length = 3083

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 91/270 (33%), Gaps = 19/270 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              +G     L V     ++        +Q+ ++P  S +  KV ++  D   I       
Sbjct: 1122 GSNGSGNQGLWVKKIHSSDPAVRVIPNNQV-YQPLLSEDGSKVVWSQGDSIWIANTNGTQ 1180

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSV---DLQSNATERL-- 297
             R          +         S +G        ++++    Y++   +       ++  
Sbjct: 1181 VRQLTKLSINIGYGDGDYLATISEDGSTIAWLRSKRNDNKFTYTIFIANADGKNLRQINI 1240

Query: 298  TNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                        S D S+I +  D   G   ++V  ++G++ + +S +      +P  S 
Sbjct: 1241 PTGSGGVRELDLSADGSKITWSQDGGYGPGGVWVANTDGTNIRELSGNLYGYNINPSISA 1300

Query: 357  QGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKK 410
             G  + +  + G  +    +     DGS+  ++            + +   R ++F++  
Sbjct: 1301 DGSTVVWAGYQGAGYASTNLYAATTDGSRFWVVPNTEEVGEFAQQSLAGDSRRVVFTKFN 1360

Query: 411  DGDTGSKLYSIDLNGRNETLINTPAYASDP 440
              D    LY  D++G    ++     AS P
Sbjct: 1361 GSD--YSLYVGDIDGIEPQILI---DASSP 1385



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 71/186 (38%), Gaps = 9/186 (4%)

Query: 160  DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPR 218
            D  Y +   E G   S I ++           ++ + + DG N+R +  P+    + E  
Sbjct: 1195 DGDYLATISEDG---STIAWLRSKRNDNKFTYTIFIANADGKNLRQINIPTGSGGVRELD 1251

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
             S +  K+ ++         V++ +T      +  GN     + P  S++G   + +  +
Sbjct: 1252 LSADGSKITWSQDGGYGPGGVWVANTDGTNIRELSGNLYGYNINPSISADGSTVVWAGYQ 1311

Query: 279  DEA---MDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIVFESDREGKEQLYVMQS 333
                   ++Y+     +    + NT  +   A  S + DS ++VF         LYV   
Sbjct: 1312 GAGYASTNLYAATTDGSRFWVVPNTEEVGEFAQQSLAGDSRRVVFTKFNGSDYSLYVGDI 1371

Query: 334  NGSDQK 339
            +G + +
Sbjct: 1372 DGIEPQ 1377



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 75/211 (35%), Gaps = 15/211 (7%)

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
            + + + S  SG       + +  G          + +  +   S +    AY TY + + 
Sbjct: 1671 VAWRTLSGTSGNYLQKFFIGNAYGLGTPLKIRETNSVSDKFALSADGTTYAYYTYINYND 1730

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
                L   +ID +   +     +      S++G++   S    +   +Y  +       R
Sbjct: 1731 PANGLWIKKIDDSGGLV-KIDEIATEIALSTDGEKIAWS----DGWRVYVANTNGTEKIR 1785

Query: 297  --LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
              L N      S S S D SQ+ + +      QL V  ++G++ + I+Q    S      
Sbjct: 1786 INLNNINGYIYSLSLSGDGSQVSWNN----GNQLLVANTDGTNIREITQ----SSTKSFL 1837

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            S  G  I +  + GEK+ I       S   +
Sbjct: 1838 SENGSQIIWAGYQGEKYGIWSASTSTSLPVV 1868



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 47/175 (26%), Gaps = 8/175 (4%)

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            ++ S   G     + V + DG NIR L+ +       P  S +   V +A Y        
Sbjct: 1259 ITWSQDGGYGPGGVWVANTDGTNIRELSGNLYGYNINPSISADGSTVVWAGYQGAGYAST 1318

Query: 240  YLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             L     D +   +               + + +R + +        +Y  D+     + 
Sbjct: 1319 NLYAATTDGSRFWVVPNTEEVGEFAQQSLAGDSRRVVFTKFNGSDYSLYVGDIDGIEPQI 1378

Query: 297  LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            L +    NI              S  +   +           +  +       + 
Sbjct: 1379 LIDASSPNIG-----IGRGHALSSYVDLGVRYNSFDPATGSGEIYTWGPSRIRYS 1428



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 74/238 (31%), Gaps = 39/238 (16%)

Query: 224  QKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQK 278
            Q VA++  D       VY+ +     AP +     S       S++G        +    
Sbjct: 1066 QAVAWSELDPNTSDWFVYVANAYGIGAPIKTDINVSGNYHATLSADGLTVAGSGILGSNG 1125

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                 ++   + S+                 S D S++V+       + +++  +NG+  
Sbjct: 1126 SGNQGLWVKKIHSSDPAVRVIPNNQVYQPLLSEDGSKVVW----SQGDSIWIANTNGTQV 1181

Query: 339  KRISQ-----DKEASYFDPVWSPQGDLIAF--TKFSGEKFA--IGVMKKDGSQERLLVED 389
            +++++           +    S  G  IA+  +K +  KF   I +   DG   R +   
Sbjct: 1182 RQLTKLSINIGYGDGDYLATISEDGSTIAWLRSKRNDNKFTYTIFIANADGKNLRQI--- 1238

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
                 PT               G  G +   +  +G   T      Y     WV   D
Sbjct: 1239 ---NIPT---------------GSGGVRELDLSADGSKITWSQDGGYGPGGVWVANTD 1278



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 20/189 (10%)

Query: 162  IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            I  ++    G   S  L    S VS    N L V + DG NIR +T S  +       S 
Sbjct: 1784 IRINLNNINGYIYSLSLSGDGSQVSWNNGNQLLVANTDGTNIREITQSSTKSFL----SE 1839

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            N  ++ +A Y  E    ++   T       +     ++ L+   SS+G +A+      + 
Sbjct: 1840 NGSQIIWAGYQGEK-YGIWSASTSTSLPVVKSLVDGNLSLS---SSDGIKAIWQ----DR 1891

Query: 282  MDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVF----ESDREGKEQLYVMQS 333
              +      S   +++  +    +        + D +++ F     +D +G     +  +
Sbjct: 1892 YFLSVSSTNSTEIQQVAESYDFRVVGGSEPVLAADGAKVAFIKAINADNQGYGSYGLYVA 1951

Query: 334  NGSDQKRIS 342
            +     + +
Sbjct: 1952 DPYKTGQAT 1960


>gi|84624888|ref|YP_452260.1| alanyl dipeptidyl peptidase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84368828|dbj|BAE69986.1| alanyl dipeptidyl peptidase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 730

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 10/114 (8%)

Query: 260 ILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYS 310
           + +P  S +G   L       +     A  ++  +L++      +RLT   +   S ++S
Sbjct: 60  VSSPTLSPDGSVVLFAKRQAKTANGTSATSLWVRNLRTRDVSPPKRLTPEGWNVNSPAFS 119

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           PD   + F S + G +QLY     G   ++++        +   SP G  I F+
Sbjct: 120 PDGKTVYFLSSKTGSQQLYAQPMAGGTPQQLT-AFAVDVDNYKLSPDGKRIVFS 172



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 88/274 (32%), Gaps = 51/274 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   V +A    +         L V  + TR    PKR+      + +P FS
Sbjct: 60  VSSPTLSPDGSVVLFAKRQAKTANGTSATSLWVRNLRTRDVSPPKRLTPEGWNVNSPAFS 119

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y+  +     ++LT       +   SPD  +IVF +   G  
Sbjct: 120 PDGKTVYFLSSKTGSQQLYAQPMAGGTPQQLTAFAVDVDNYKLSPDGKRIVFSA---GVF 176

Query: 327 QLYVMQSNGSDQK----------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           Q        + +K           +  D+        W+       F        A  V+
Sbjct: 177 QDCGSDLGCTKKKLGELKNHKASGVVYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVV 236

Query: 377 KKDGSQERLLVED-----SNLQAPTWSPSGRSLIFS--------------RKKDG----- 412
                   L  +            TWSP G S++ S               K  G     
Sbjct: 237 GASAISATLAGDAPSKPFGGNDDYTWSPDGASVVASVRIPQSYGTEAGKNTKAGGKPTGN 296

Query: 413 ----DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                T   LY +D +G++  +  T   AS+P W
Sbjct: 297 DEPWQTNFDLYRLDASGKSAPVNLT---ASNPAW 327



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 102/331 (30%), Gaps = 66/331 (19%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R +    S  ++Q    + G    ++  +     SG++ + L V   D  N
Sbjct: 159 NYKLSPDGKRIV---FSAGVFQDCGSDLGCTKKKLGELKNHKASGVVYDQLFVRHWDTWN 215

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSM 259
                              + ++      +        ++         A          
Sbjct: 216 -------------------DGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGG 256

Query: 260 ILAPRFSSNGKRALISVQKDE-------------------------AMDIYSVDLQSNA- 293
                +S +G   + SV+  +                           D+Y +D    + 
Sbjct: 257 NDDYTWSPDGASVVASVRIPQSYGTEAGKNTKAGGKPTGNDEPWQTNFDLYRLDASGKSA 316

Query: 294 TERLT-NTLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQD 344
              LT +    +    +S D   +         FE+DR G   L  M       + I+  
Sbjct: 317 PVNLTASNPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFG---LMAMDVASGKTREIAPT 373

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S  + V S  G  +  +     +  +  +     +   LV + ++ APT +  G +L
Sbjct: 374 WDRSAGEIVLSEDGSSLYTSADDLGEHPLFKIAIASGEATRLVGEGSVHAPTLA--GNTL 431

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            F+R     +G +++  D  G+    I+  A
Sbjct: 432 AFTRS-SLKSGDQVFVSDTQGQGLRAISQSA 461



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 86/311 (27%), Gaps = 67/311 (21%)

Query: 183 SVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +G    SL V +   RD +  + LTP    +   P FSP+ + V + +       + 
Sbjct: 80  KTANGTSATSLWVRNLRTRDVSPPKRLTPEGWNVN-SPAFSPDGKTVYFLSSKTGS--QQ 136

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL--QSNATERL 297
                     P+++  F   +   + S +GKR + S            DL         L
Sbjct: 137 LYAQPMAGGTPQQLTAFAVDVDNYKLSPDGKRIVFSA---GVFQDCGSDLGCTKKKLGEL 193

Query: 298 TNTLFINI---------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-- 346
            N     +           +++      +F ++             G+     +   +  
Sbjct: 194 KNHKASGVVYDQLFVRHWDTWNDGRRNTLFVAE---LPAAGAKAVVGASAISATLAGDAP 250

Query: 347 ----ASYFDPVWSPQGDLIAFTKFSG-------------------------EKFAIGVMK 377
                   D  WSP G  +  +                               F +  + 
Sbjct: 251 SKPFGGNDDYTWSPDGASVVASVRIPQSYGTEAGKNTKAGGKPTGNDEPWQTNFDLYRLD 310

Query: 378 KDG-SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLI 431
             G S    L     +    P +S  G++L +   K     +    L ++D+       I
Sbjct: 311 ASGKSAPVNLTASNPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVASGKTREI 370

Query: 432 NTPAYASDPQW 442
                   P W
Sbjct: 371 A-------PTW 374


>gi|170115890|ref|XP_001889138.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635928|gb|EDR00229.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1505

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 94/262 (35%), Gaps = 32/262 (12%)

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E   F+S   +++    SG    ++ V D   G ++       D  +    FSP+ + + 
Sbjct: 1151 ESVAFSSDGKYIA----SGSADCTVRVWDALTGQSVIAPFKGHDNWVLSVAFSPDGRYIT 1206

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D    +RV+ + T        IG     + +  +S +G+   IS   D+ + I+  
Sbjct: 1207 SGSSD--KTVRVWDVLTGQTTLDPFIG-HGDHVNSVAYSPDGRFI-ISGSCDKTIRIW-- 1260

Query: 288  DLQSNATERLTN---TLFINISA-SYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRIS 342
            D Q+  +  L N       ++ A ++SPD   IV  S DR     + V            
Sbjct: 1261 DAQTGQS--LMNPLIGHGDDVKAVAFSPDGRYIVSGSCDRT----VRVWNFQTGQSVMDP 1314

Query: 343  QDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQ--APTWS 398
                +SY     +SP+G  I           I +     G       +  ++   +  +S
Sbjct: 1315 LKGHSSYVLSVAFSPEGRYIVSCSRDQT---IRLWDARTGHSVGDPFKGHDMAVLSVVFS 1371

Query: 399  PSGRSLIFSRKKDGDTGSKLYS 420
            P G  +        D   +L+ 
Sbjct: 1372 PDGSHI---TSGSADKTIRLWD 1390



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 54/313 (17%), Positives = 101/313 (32%), Gaps = 44/313 (14%)

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
               L    ++WD    + ++             I H   D+  + +              
Sbjct: 950  SGSLDSTIQVWDAGTGQCVMD----------PLIGH---DEAVECVAYSPDG-------- 988

Query: 181  SESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
               ++SG +  ++ V D   G +I  L    D I     FSPN + +        +   +
Sbjct: 989  -MRIISGSLDCTVRVWDALSGQSIMVLLRGSDYIESV-AFSPNGEDIV----CGTECHTI 1042

Query: 240  YLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
               +    +  K  + N +  I +  FS NGK   IS  +D  + ++         +  T
Sbjct: 1043 RCWNALTSQCIKSPLENGKKTIFSVAFSPNGKHI-ISGCRDGTIRVWDAMAGHTEVDCPT 1101

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SP+   IV  SD      L V  +  G       +   ++     +S  
Sbjct: 1102 GHDDGINSVAFSPNCRHIVSGSD---DTTLRVWDALTGVSVMGSLKGHNSNVESVAFSSD 1158

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDT 414
            G  IA          + V      Q  +     +     +  +SP GR +        D 
Sbjct: 1159 GKYIASGSADCT---VRVWDALTGQSVIAPFKGHDNWVLSVAFSPDGRYI---TSGSSDK 1212

Query: 415  GSKLYSIDLNGRN 427
              +++ + L G+ 
Sbjct: 1213 TVRVWDV-LTGQT 1224



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 78/228 (34%), Gaps = 21/228 (9%)

Query: 186  SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            SG    ++ V D   G          D  +    FSPN + +   + D    LRV+   T
Sbjct: 1078 SGCRDGTIRVWDAMAGHTEVDCPTGHDDGINSVAFSPNCRHIVSGSDDT--TLRVWDALT 1135

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             +       G   S + +  FSS+GK    S   D  + ++  D  +  +  +      +
Sbjct: 1136 GVSVMGSLKG-HNSNVESVAFSSDGKYIA-SGSADCTVRVW--DALTGQSV-IAPFKGHD 1190

Query: 305  ---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
               +S ++SPD   I   S    K  + V                  + +   +SP G  
Sbjct: 1191 NWVLSVAFSPDGRYI--TSGSSDKT-VRVWDVLTGQTTLDPFIGHGDHVNSVAYSPDGRF 1247

Query: 361  IAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQAPTWSPSGRSLI 405
            I           I +      Q     L+    +++A  +SP GR ++
Sbjct: 1248 IISGSCDKT---IRIWDAQTGQSLMNPLIGHGDDVKAVAFSPDGRYIV 1292



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 80/229 (34%), Gaps = 21/229 (9%)

Query: 185  VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VSG    +L V D   G ++       +  +    FS + + +A  + D      V + D
Sbjct: 1120 VSGSDDTTLRVWDALTGVSVMGSLKGHNSNVESVAFSSDGKYIASGSAD----CTVRVWD 1175

Query: 244  TRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---L 297
                ++   I  F+     +L+  FS +G+    S   D+ + ++  D+ +  T     +
Sbjct: 1176 ALTGQS--VIAPFKGHDNWVLSVAFSPDGRYIT-SGSSDKTVRVW--DVLTGQTTLDPFI 1230

Query: 298  TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSP 356
             +   +N S +YSPD   I+  S     + + +  +                     +SP
Sbjct: 1231 GHGDHVN-SVAYSPDGRFIISGSC---DKTIRIWDAQTGQSLMNPLIGHGDDVKAVAFSP 1286

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             G  I                     + L    S + +  +SP GR ++
Sbjct: 1287 DGRYIVSGSCDRTVRVWNFQTGQSVMDPLKGHSSYVLSVAFSPEGRYIV 1335



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/290 (14%), Positives = 87/290 (30%), Gaps = 40/290 (13%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      +           R+WD    + +I               H   + +      
Sbjct: 1152 SVAFSSDGKYIASGSADCTVRVWDALTGQSVIA----------PFKGH--DNWVLSVAFS 1199

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G + +          SG    ++ V D   G             +    +SP+ + + 
Sbjct: 1200 PDGRYIT----------SGSSDKTVRVWDVLTGQTTLDPFIGHGDHVNSVAYSPDGRFII 1249

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D    +R++   T        IG     + A  FS +G+  + S   D  + +++ 
Sbjct: 1250 SGSCD--KTIRIWDAQTGQSLMNPLIG-HGDDVKAVAFSPDGRYIV-SGSCDRTVRVWNF 1305

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKE 346
                +  + L       +S ++SP+   IV  S     + + +  +          +  +
Sbjct: 1306 QTGQSVMDPLKGHSSYVLSVAFSPEGRYIVSCSR---DQTIRLWDARTGHSVGDPFKGHD 1362

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             +    V+SP G  I           I +   +     L    S++  P+
Sbjct: 1363 MAVLSVVFSPDGSHITSGSADKT---IRLWDAETGYTNLNPSASSVVLPS 1409



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 102/310 (32%), Gaps = 35/310 (11%)

Query: 121  KDRLRVEFRLWDVKDRKQII----GKKFFSSPASW----RKIAHTISDDIYQ-------- 164
                    R+WD    + ++    G   + +  ++    R I    +D   +        
Sbjct: 864  SGSYDKTLRVWDALTGQSVMDPLKGHSDWVNSVAYSPSGRHIISGSADHTVRIWDAGTGW 923

Query: 165  -----SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPR 218
                  I  ++G           S+VSG + +++ V D   G  +       D+ +    
Sbjct: 924  CVMDPLIGHDEGVKCVAYSPNGMSIVSGSLDSTIQVWDAGTGQCVMDPLIGHDEAVECVA 983

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            +SP+  ++   + D      V + D    ++   +      I +  FS NG+  +    +
Sbjct: 984  YSPDGMRIISGSLD----CTVRVWDALSGQSIMVLLRGSDYIESVAFSPNGEDIV-CGTE 1038

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
               +  ++          L N      S ++SP+   I+    R+G  +++   +  ++ 
Sbjct: 1039 CHTIRCWNALTSQCIKSPLENGKKTIFSVAFSPNGKHII-SGCRDGTIRVWDAMAGHTEV 1097

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAP 395
               +   +       +SP    I           + V            L   +SN+++ 
Sbjct: 1098 DCPT-GHDDGINSVAFSPNCRHIVSGSDDTT---LRVWDALTGVSVMGSLKGHNSNVESV 1153

Query: 396  TWSPSGRSLI 405
             +S  G+ + 
Sbjct: 1154 AFSSDGKYIA 1163



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 56/159 (35%), Gaps = 11/159 (6%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + +   +    A  +S NG+  + S   D A+ I+      +  + L        S +YS
Sbjct: 798 RCLLRIQGNNTAVAYSPNGRHIV-SGCYDGAVCIWDAVTGHSIMDPLEGHDEKTTSVAYS 856

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGE 369
           P+   IV  S     + L V  +             + + +   +SP G  I        
Sbjct: 857 PNGKHIVSGSY---DKTLRVWDALTGQSVMDPLKGHSDWVNSVAYSPSGRHIISGSAD-- 911

Query: 370 KFAIGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSLI 405
              + +          + L+  D  ++   +SP+G S++
Sbjct: 912 -HTVRIWDAGTGWCVMDPLIGHDEGVKCVAYSPNGMSIV 949


>gi|153873261|ref|ZP_02001902.1| Serine/Threonine protein kinase with WD40 repeats [Beggiatoa sp.
           PS]
 gi|152070272|gb|EDN68097.1| Serine/Threonine protein kinase with WD40 repeats [Beggiatoa sp.
           PS]
          Length = 363

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 54/294 (18%), Positives = 99/294 (33%), Gaps = 40/294 (13%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            +LWD+   K +      +    W +  H     +   I    G F           VSG
Sbjct: 107 IKLWDINTGKIL-----RTFKKGWWQKGHE--GPVRTVIFSPDGHFF----------VSG 149

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              N++   +     +R +       +    FSP+ + +A  +   +             
Sbjct: 150 SDDNTIKFWELKTGKVRRILVGNGLWVRALAFSPDGRILASESETIK---------LWEV 200

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              K +           FS +G R L S   + A+ ++ VD      E L        + 
Sbjct: 201 NTGKTLFTLNGKNTI-AFSPDG-RILASGGANNAITLWEVDTA-KEIETLKKHGNAVTTL 257

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD S +   S+    + + +   +   Q+      E S F  V+ P G  +      
Sbjct: 258 AFSPDGSTLASGSE---DDTIKLWDLSTGKQRCTLVGHEHSVFSVVFHPDGQTLTSASGD 314

Query: 368 GEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                I     +  +E   L   D  + +  +SP+GR+L+ +     D   KL+
Sbjct: 315 DT---IKHWDIETGKEIYTLYGHDCTVNSIAFSPNGRTLVSASN---DKTIKLW 362



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 65/203 (32%), Gaps = 31/203 (15%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI----NISAS 308
           +   R  + +   S + +  L S  +D  + ++  D+ +    R T         +    
Sbjct: 79  LRGHRDWVNSVAVSPD-EHILASGSEDNTIKLW--DINTGKILR-TFKKGWWQKGHEGPV 134

Query: 309 ----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               +SPD    V  SD      +   +      +RI            +SP G ++A  
Sbjct: 135 RTVIFSPDGHFFVSGSD---DNTIKFWELKTGKVRRILVGNGLWVRALAFSPDGRILA-- 189

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               E   +  +       + L   +      +SP GR L        +    L+ +D  
Sbjct: 190 -SESETIKLWEVNTG----KTLFTLNGKNTIAFSPDGRILA---SGGANNAITLWEVDTA 241

Query: 425 GRNETL------INTPAYASDPQ 441
              ETL      + T A++ D  
Sbjct: 242 KEIETLKKHGNAVTTLAFSPDGS 264


>gi|126656106|ref|ZP_01727490.1| WD40-like beta propeller repeat protein [Cyanothece sp. CCY0110]
 gi|126622386|gb|EAZ93092.1| WD40-like beta propeller repeat protein [Cyanothece sp. CCY0110]
          Length = 167

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 3/137 (2%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                 P    N +S    P +S +G+    + ++    DIY  DL+      L N    
Sbjct: 25  LTTPEIPTGGLNTKSPEEYPTYSGDGRYLAFASERQGHRDIYLFDLEQKRLVSLPNLNRR 84

Query: 304 NIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           + S    + S D   +V+ S   GK  + V   N      +S +   S   P  +  G  
Sbjct: 85  DSSQDQPALSFDGRYLVYVSTERGKPDIMVYDRNKQRSTLLSANVRGSVRQPTITGDGSQ 144

Query: 361 IAFTKFSGEKFAIGVMK 377
           +AF      ++ I ++ 
Sbjct: 145 VAFQTTQLGEWNIAIVN 161



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 56/134 (41%), Gaps = 10/134 (7%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDPV 353
           NT       +YS D   + F S+R+G   +Y+      +QKR+        +++S   P 
Sbjct: 36  NTKSPEEYPTYSGDGRYLAFASERQGHRDIYLFDL---EQKRLVSLPNLNRRDSSQDQPA 92

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKD 411
            S  G  + +      K  I V  ++  +  LL  +   +++ PT +  G  + F   + 
Sbjct: 93  LSFDGRYLVYVSTERGKPDIMVYDRNKQRSTLLSANVRGSVRQPTITGDGSQVAFQTTQL 152

Query: 412 GDTGSKLYSIDLNG 425
           G+    + +  ++G
Sbjct: 153 GEWNIAIVNHQVSG 166



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 46/120 (38%), Gaps = 4/120 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRAL 273
            P +S + + +A+A+        +YL D    R      +    S    P  S +G+  +
Sbjct: 43  YPTYSGDGRYLAFASERQGH-RDIYLFDLEQKRLVSLPNLNRRDSSQDQPALSFDGRYLV 101

Query: 274 ISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               +    DI   D     +  L+ N        + + D SQ+ F++ + G+  + ++ 
Sbjct: 102 YVSTERGKPDIMVYDRNKQRSTLLSANVRGSVRQPTITGDGSQVAFQTTQLGEWNIAIVN 161



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 36/105 (34%), Gaps = 3/105 (2%)

Query: 188 IIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                + + D +   +  L     RD    +P  S + + + Y + +      + + D  
Sbjct: 60  QGHRDIYLFDLEQKRLVSLPNLNRRDSSQDQPALSFDGRYLVYVSTERGKP-DIMVYDRN 118

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             R+     N R  +  P  + +G +      +    +I  V+ Q
Sbjct: 119 KQRSTLLSANVRGSVRQPTITGDGSQVAFQTTQLGEWNIAIVNHQ 163



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 4/49 (8%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           L   S  + PT+S  GR L F+ ++ G     +Y  DL    + L++ P
Sbjct: 35  LNTKSPEEYPTYSGDGRYLAFASERQGHR--DIYLFDL--EQKRLVSLP 79


>gi|110638110|ref|YP_678319.1| OmpA family peptidoglycan-associated lipoprotein [Cytophaga
           hutchinsonii ATCC 33406]
 gi|110280791|gb|ABG58977.1| peptidoglycan-associated lipoprotein, OmpA family [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 640

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 51/261 (19%), Positives = 87/261 (33%), Gaps = 48/261 (18%)

Query: 209 SRDQILFEPRFSPNQQKVAYAT---------------YDDEDILRVYLMDTRIDRAPKRI 253
           +     + P  S ++ ++ + +               +  EDI +   ++  +   P  I
Sbjct: 163 NSPYPDYVPVISADETELLFTSRRPSTTGGGKDLEDGFYFEDIYQSSRLNDTLWSEPVDI 222

Query: 254 GNF---RSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSN---ATERL---TNTLFI 303
           GN     S       S +G   ++      +  D+YS  L+       +RL    NT + 
Sbjct: 223 GNGINTESHDACVALSPDGMELIMYRHSGTDGGDLYSSTLKGEVWEKPQRLGNTINTPYW 282

Query: 304 NISASYSPDSSQIVFESDREGKEQ-----LYVMQSNGSDQKRISQDKEASYF----DPVW 354
             SAS S D   I F S+R+G        +  M+ NG     I      +       P  
Sbjct: 283 EPSASISADEKAIFFTSNRKGGLGGTDIYMVRMKDNGDYGPAILLGPSINTIHDEDAPFI 342

Query: 355 SPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLVEDSNLQAP----------TWSPSG 401
              G  + F+         + I     D     +L    N+  P           WS  G
Sbjct: 343 HADGKTLYFSSKGHKSMGGYDIFYCTIDIETGEILTTPQNIGYPINTADDDVFFVWSADG 402

Query: 402 RSLIFSRKKDGDTGSK-LYSI 421
           +   FS ++ G  G K +Y +
Sbjct: 403 KRAYFSSERAGGYGEKDIYVL 423



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 74/213 (34%), Gaps = 36/213 (16%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA---NIRYLTPS 209
            I + I+ + + +      D    I++      SG     L      G      + L  +
Sbjct: 221 DIGNGINTESHDACVALSPDGMELIMY----RHSGTDGGDLYSSTLKGEVWEKPQRLGNT 276

Query: 210 RDQILFEPR--FSPNQQKVAYATYDDED--ILRVYLMDTR-IDRAPKRIGNFRSMIL--- 261
            +   +EP    S +++ + + +          +Y++  +        I    S+     
Sbjct: 277 INTPYWEPSASISADEKAIFFTSNRKGGLGGTDIYMVRMKDNGDYGPAILLGPSINTIHD 336

Query: 262 --APRFSSNGKRALISVQKD---EAMDIY--SVDLQSNATERLT---------NTLFINI 305
             AP   ++GK    S +        DI+  ++D+++     LT         NT   ++
Sbjct: 337 EDAPFIHADGKTLYFSSKGHKSMGGYDIFYCTIDIETGEI--LTTPQNIGYPINTADDDV 394

Query: 306 SASYSPDSSQIVFESDREGKEQ---LYVMQSNG 335
              +S D  +  F S+R G      +YV++   
Sbjct: 395 FFVWSADGKRAYFSSERAGGYGEKDIYVLERES 427



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 54/160 (33%), Gaps = 32/160 (20%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEAS 348
                + N+ + +     S D ++++F S R           +G    D  + S+  +  
Sbjct: 156 RNLGPVINSPYPDYVPVISADETELLFTSRRPSTTGGGKDLEDGFYFEDIYQSSRLNDTL 215

Query: 349 YFDP----------------VWSPQG-DLIAFTKFSGEKFAIGVMKKDG---SQERLLVE 388
           + +P                  SP G +LI +     +   +      G    + + L  
Sbjct: 216 WSEPVDIGNGINTESHDACVALSPDGMELIMYRHSGTDGGDLYSSTLKGEVWEKPQRL-- 273

Query: 389 DSNLQAPTW------SPSGRSLIFSRKKDGD-TGSKLYSI 421
            + +  P W      S   +++ F+  + G   G+ +Y +
Sbjct: 274 GNTINTPYWEPSASISADEKAIFFTSNRKGGLGGTDIYMV 313


>gi|193211923|ref|YP_001997876.1| WD-40 repeat protein [Chlorobaculum parvum NCIB 8327]
 gi|193085400|gb|ACF10676.1| WD-40 repeat protein [Chlorobaculum parvum NCIB 8327]
          Length = 316

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 86/239 (35%), Gaps = 19/239 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   ++  + D      +Y+    D  +    FSP+ + +A  + D      + L DT 
Sbjct: 93  SGSTDSTARIWDASTGECKYVCKGHDTAVRMVAFSPDSKTLATCSRDT----TIRLWDTE 148

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +   ++   +S I    +S +GK+ +      E   +   D++S   + + +    + 
Sbjct: 149 SGKETAKLLGHKSYIECVAWSHDGKKLV---SCGEEPVVRIWDVESG--KNVASFQTQDT 203

Query: 306 ---SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S  +SPD S I F        ++ ++ +         +  E       +SP G   A
Sbjct: 204 LSHSVCFSPDDSLIAFC---GRDAKVKILDAASGKIIHTLEGHEDGVRSVCFSPDGSE-A 259

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +  + E   +  +K              +Q+   SP GR +        D   KL+ I
Sbjct: 260 ASAANDESVRLWDVKAGKELHCYRGHTLEVQSVDISPDGRMIASGSD---DRKIKLWGI 315



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 69/208 (33%), Gaps = 16/208 (7%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N+          +   +FSP+ +K+    +D+     V L D     +   +    + + 
Sbjct: 25  NLIKTMEGHLDRVLGVKFSPDGKKLVSGGFDE----LVMLWDVEAGTSIHTMKGHETWVE 80

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES 320
              +S +GK    S   D    I+  D  +   + +       +   ++SPDS  +   S
Sbjct: 81  CIDYSRDGKLLA-SGSTDSTARIW--DASTGECKYVCKGHDTAVRMVAFSPDSKTLATCS 137

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + +  +    +       ++      WS  G  +      GE+  + +   + 
Sbjct: 138 R---DTTIRLWDTESGKETAKLLGHKSYIECVAWSHDGKKLVSC---GEEPVVRIWDVES 191

Query: 381 SQERLL--VEDSNLQAPTWSPSGRSLIF 406
            +       +D+   +  +SP    + F
Sbjct: 192 GKNVASFQTQDTLSHSVCFSPDDSLIAF 219



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 69/170 (40%), Gaps = 14/170 (8%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +L  +FS +GK+ + S   DE + ++ V+  ++      +  ++     YS D   +   
Sbjct: 37  VLGVKFSPDGKKLV-SGGFDELVMLWDVEAGTSIHTMKGHETWVEC-IDYSRDGKLLASG 94

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S         +  ++  + K + +  + +     +SP    +A          I +   +
Sbjct: 95  ST---DSTARIWDASTGECKYVCKGHDTAVRMVAFSPDSKTLATCSRDTT---IRLWDTE 148

Query: 380 GSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +E  +LL   S ++   WS  G+ L+       +   +++ ++ +G+N
Sbjct: 149 SGKETAKLLGHKSYIECVAWSHDGKKLV---SCGEEPVVRIWDVE-SGKN 194


>gi|158339294|ref|YP_001520471.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158309535|gb|ABW31152.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1212

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 87/249 (34%), Gaps = 25/249 (10%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VSG    ++ + + +  +   +       ++    SP+ Q VA ++ D      + L D 
Sbjct: 766  VSGGRDKTIRLWNIETGDCLQILQGHIHWIWGVSVSPDGQTVASSSSD----CSIKLWDV 821

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER----LTNT 300
               +  + +    S +    FS +G+R   S   D+ +  +  D+ +    R     T  
Sbjct: 822  ITGQCLQTLLGHTSGLYGIAFSPDGQRLT-SGSSDQTVKFW--DISTGKVLRTVQGHTRQ 878

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +    S + + D   +   SDR   + +        +  +  Q      F    SP G  
Sbjct: 879  IHQVRSLALNVDGHTLASSSDR---QIIRFWDLQTGNCSQTLQGHTGWIFGIDQSPDGQW 935

Query: 361  IAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            +A      +   I        V    G    +     N  +P+ S   ++L+ S  +  D
Sbjct: 936  LASAGGEDQTIKIWDVKTGQCVQNLQGHLAWVFDVAFNPASPSES--NKTLLASGSQ--D 991

Query: 414  TGSKLYSID 422
               KL+ +D
Sbjct: 992  QTIKLWDLD 1000



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 89/292 (30%), Gaps = 60/292 (20%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     L V   +              +    FSP+   +A ++ D      + L D  
Sbjct: 599 TGDSNGFLSVWQANTGQRLLTCQGHAGWVMSVDFSPDGTLLASSSNDQ----DIRLWDAH 654

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-------------------- 285
             +  K +    +++ + RF+ +GK    S   D+ + ++                    
Sbjct: 655 TGQCLKILQGHTNLVWSVRFNPDGKHLA-SGCHDQTIKVWNVSSGECCHTLRAHASGVFD 713

Query: 286 -------------SVD--------LQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
                        S+D           +  + L       +S +Y+     +V      G
Sbjct: 714 VVFCMGGKTLASSSMDCTVKLWDWANGSTLKTLEGHTDAVLSLAYNTLDQILV----SGG 769

Query: 325 KEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ- 382
           +++ + +      D  +I Q      +    SP G  +A +       +I +      Q 
Sbjct: 770 RDKTIRLWNIETGDCLQILQGHIHWIWGVSVSPDGQTVASSSSD---CSIKLWDVITGQC 826

Query: 383 -ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            + LL   S L    +SP G+ L        D   K + I   G+    +  
Sbjct: 827 LQTLLGHTSGLYGIAFSPDGQRL---TSGSSDQTVKFWDIS-TGKVLRTVQG 874



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 76/248 (30%), Gaps = 59/248 (23%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSPN Q +A  T D    L V+  +T       +       +++  FS +G     S  
Sbjct: 589 AFSPNGQMIA--TGDSNGFLSVWQANTGQRLLTCQ--GHAGWVMSVDFSPDGTLLA-SSS 643

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSN 334
            D+ + ++  D  +    + L     +  S  ++PD   +       G   + + V   +
Sbjct: 644 NDQDIRLW--DAHTGQCLKILQGHTNLVWSVRFNPDGKHLA-----SGCHDQTIKVWNVS 696

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--------------------------- 367
             +     +   +  FD V+   G  +A +                              
Sbjct: 697 SGECCHTLRAHASGVFDVVFCMGGKTLASSSMDCTVKLWDWANGSTLKTLEGHTDAVLSL 756

Query: 368 ------------GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGD 413
                       G    I +   +      +++     +   + SP G+++  S     D
Sbjct: 757 AYNTLDQILVSGGRDKTIRLWNIETGDCLQILQGHIHWIWGVSVSPDGQTVASSSS---D 813

Query: 414 TGSKLYSI 421
              KL+ +
Sbjct: 814 CSIKLWDV 821



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 40/107 (37%), Gaps = 9/107 (8%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQ 315
             +L   FS NG+    +   +  + ++  +        LT        +S  +SPD + 
Sbjct: 583 GDMLCVAFSPNGQMIA-TGDSNGFLSVWQAN---TGQRLLTCQGHAGWVMSVDFSPDGTL 638

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +   S+    + + +  ++     +I Q      +   ++P G  +A
Sbjct: 639 LASSSN---DQDIRLWDAHTGQCLKILQGHTNLVWSVRFNPDGKHLA 682



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 90/301 (29%), Gaps = 55/301 (18%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                 +   +    ++V S     S+ + D                L+   FSP+ Q++ 
Sbjct: 791  HIHWIWGVSVSPDGQTVASSSSDCSIKLWDVITGQCLQTLLGHTSGLYGIAFSPDGQRLT 850

Query: 228  ---------YATYDDEDILR--------------------------------VYLMDTRI 246
                     +       +LR                                +   D + 
Sbjct: 851  SGSSDQTVKFWDISTGKVLRTVQGHTRQIHQVRSLALNVDGHTLASSSDRQIIRFWDLQT 910

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINI 305
                + +      I     S +G+    +  +D+ + I+  D+++    + L   L    
Sbjct: 911  GNCSQTLQGHTGWIFGIDQSPDGQWLASAGGEDQTIKIW--DVKTGQCVQNLQGHLAWVF 968

Query: 306  SASY---SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              ++   SP  S     +     + + +   +  +  +       + +   ++PQG L+A
Sbjct: 969  DVAFNPASPSESNKTLLASGSQDQTIKLWDLDRGECLKTLYGHSQTVWTVAFNPQGTLLA 1028

Query: 363  FTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                 G+   + V           LL   + + + T++P G  L    +   D   KL+ 
Sbjct: 1029 ---SGGQDHTVKVWNIPTGSLLTTLLGHTNEVLSVTFNPQGTILASGSQ---DQSIKLWD 1082

Query: 421  I 421
            +
Sbjct: 1083 V 1083



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 92/308 (29%), Gaps = 38/308 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIA-----HTISD------- 160
            G+ +  G     V+F  WD+   K +   +         R +A     HT++        
Sbjct: 846  GQRLTSGSSDQTVKF--WDISTGKVLRTVQGHTRQIHQVRSLALNVDGHTLASSSDRQII 903

Query: 161  ---DIYQSITGEKGDFNSRILFVSESVVSGII-------KNSLCVMDRDGANIRYLTPSR 210
               D+      +    ++  +F  +    G           ++ + D             
Sbjct: 904  RFWDLQTGNCSQTLQGHTGWIFGIDQSPDGQWLASAGGEDQTIKIWDVKTGQCVQNLQGH 963

Query: 211  DQILFEPRF---SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               +F+  F   SP++          +D   + L D       K +      +    F+ 
Sbjct: 964  LAWVFDVAFNPASPSESNKTLLASGSQD-QTIKLWDLDRGECLKTLYGHSQTVWTVAFNP 1022

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
             G     S  +D  + ++++    +    L       +S +++P  + +   S     + 
Sbjct: 1023 QGTLLA-SGGQDHTVKVWNIP-TGSLLTTLLGHTNEVLSVTFNPQGTILASGSQ---DQS 1077

Query: 328  LYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +         K ISQ +    +   +SP G L+A          I +      +    
Sbjct: 1078 IKLWDVEREQALKTISQQEMGHIWTLAFSPDGHLLASGSVD---HMIRLWDIHTGENVQT 1134

Query: 387  VEDSNLQA 394
            ++      
Sbjct: 1135 LKGHTNWV 1142


>gi|167754126|ref|ZP_02426253.1| hypothetical protein ALIPUT_02419 [Alistipes putredinis DSM 17216]
 gi|167658751|gb|EDS02881.1| hypothetical protein ALIPUT_02419 [Alistipes putredinis DSM 17216]
          Length = 715

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 57/283 (20%), Positives = 90/283 (31%), Gaps = 67/283 (23%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  M++    IR     +               +   +Y  +D     L + + D+  +
Sbjct: 32  RLRAMNQRAQGIRPAADGKSYTTLR------GNAIERHSY-TKDAPGELLFEWKNDKENR 84

Query: 252 RIGNFRSMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINI 305
            I +++       FS +GK  L+S+      +     D Y  D        +   L    
Sbjct: 85  DIADYQ-------FSPDGKLLLLSIGSEPIYRHSYTTDYYLKDADG--LRPILTDLSDTR 135

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--------------- 350
            AS+SPD   I F S       LY+    G   + I+ D   +                 
Sbjct: 136 DASFSPDGRTIAFSS----GNNLYLYDIVGDSVRPITTDGAWNRIINGTTDWVYEEECAF 191

Query: 351 --DPVWSPQGDLIAFTKFSGEKFAIG-VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                +SP G  IA+ +F   +  +  +M+ DG           L    +S       F 
Sbjct: 192 TKAYAFSPDGQKIAYLRFDESRVPVFEMMRYDGK----------LYNEAYS-------FK 234

Query: 408 RKKDGDTGS--KLYSIDL-NGRNETLINTPAYAS---DPQWVG 444
             K GD  S   LY  DL  G  E +   P        P+W  
Sbjct: 235 YPKAGDANSVVDLYVYDLKTGETERVDVGPDRGQYILQPEWTP 277



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 94/305 (30%), Gaps = 58/305 (19%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---YDDEDILRVYLM 242
                    + D DG        S  +      FSP+ + +A+++       DI+   + 
Sbjct: 109 RHSYTTDYYLKDADGLRPILTDLSDTRDA---SFSPDGRTIAFSSGNNLYLYDIVGDSVR 165

Query: 243 DTRIDRAPKRIGNFRSMIL---------APRFSSNGKRALI------------------- 274
               D A  RI N  +  +         A  FS +G++                      
Sbjct: 166 PITTDGAWNRIINGTTDWVYEEECAFTKAYAFSPDGQKIAYLRFDESRVPVFEMMRYDGK 225

Query: 275 ------------SVQKDEAMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFE 319
                       +   +  +D+Y  DL++  TER+          +   ++PD  ++ F+
Sbjct: 226 LYNEAYSFKYPKAGDANSVVDLYVYDLKTGETERVDVGPDRGQYILQPEWTPDG-RLCFQ 284

Query: 320 --SDREGKEQLYVMQSNGSDQ----KRISQDKEASYFDPVWSPQGDL-IAFTKFSGEKFA 372
             + R+   +  +   +G+ Q    +R  +  +       +   G   I   + S     
Sbjct: 285 RMNRRQNHFEAVLCNPDGTQQVIYDERSPKYVDHLNKTFYFLEDGRRFIVREETSTGYMH 344

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + +          + +               + +   +       LY I L+G+++  + 
Sbjct: 345 LYLYGIGQGVLHPITQGEWEVTDFVGLRSDKVYYISTESSPLKRDLYRIGLDGKHKERL- 403

Query: 433 TPAYA 437
           TP   
Sbjct: 404 TPGDG 408



 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 88/270 (32%), Gaps = 28/270 (10%)

Query: 140 IGKKFFSSPASWRKIAHTISDD---IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
             K +  SP   +       +    +++ +  +   +N    F             L V 
Sbjct: 191 FTKAYAFSPDGQKIAYLRFDESRVPVFEMMRYDGKLYNEAYSFKYPKAGDANSVVDLYVY 250

Query: 197 D-RDGANIRY-LTPSRDQILFEPRFSPNQQKVAYATYDDEDI--------LRVYLMDTRI 246
           D + G   R  + P R Q + +P ++P+  ++ +   +                      
Sbjct: 251 DLKTGETERVDVGPDRGQYILQPEWTPDG-RLCFQRMNRRQNHFEAVLCNPDGTQQVIYD 309

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINI 305
           +R+PK + +         F  +G+R ++  +     M +Y   +       +T   +   
Sbjct: 310 ERSPKYVDHLNKTFY---FLEDGRRFIVREETSTGYMHLYLYGIGQGVLHPITQGEWEVT 366

Query: 306 SASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                  S ++ + S      K  LY +  +G  ++R++         P      DL  +
Sbjct: 367 D-FVGLRSDKVYYISTESSPLKRDLYRIGLDGKHKERLTPGDGYYSIYPS----ADLSYY 421

Query: 364 TKFSGEKFAIG---VMKKDGSQERLLVEDS 390
               G   A G   V    G + R L +++
Sbjct: 422 ICEGGGSSAPGRTDVFNAAGKRVRTLYDNA 451


>gi|257060460|ref|YP_003138348.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Cyanothece sp. PCC 8802]
 gi|256590626|gb|ACV01513.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Cyanothece sp. PCC 8802]
          Length = 190

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 9/129 (6%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS------AS 308
           N R     P  S +G+   +   ++    I   DL+    ++L N   +N S       S
Sbjct: 41  NSRYNDQQPALSGDGRWVALVSNRNGTNQILLYDLR---AKQLVNLPGLNQSNVILESPS 97

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S     +V+ S  +G+  + +        + ++Q   +   +P  SP G  I F     
Sbjct: 98  LSRTGRYLVYISSIQGRPDVALYDRATKRTELLTQGYRSWVRNPSISPDGRYIVFETARR 157

Query: 369 EKFAIGVMK 377
            ++ I V  
Sbjct: 158 GQWDIEVFD 166



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 46/126 (36%), Gaps = 4/126 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSP 356
           N+ + +   + S D   +   S+R G  Q+ +          +    +++     P  S 
Sbjct: 41  NSRYNDQQPALSGDGRWVALVSNRNGTNQILLYDLRAKQLVNLPGLNQSNVILESPSLSR 100

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDT 414
            G  + +      +  + +  +   +  LL +        P+ SP GR ++F   + G  
Sbjct: 101 TGRYLVYISSIQGRPDVALYDRATKRTELLTQGYRSWVRNPSISPDGRYIVFETARRGQW 160

Query: 415 GSKLYS 420
             +++ 
Sbjct: 161 DIEVFD 166



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRAL 273
           +P  S + + VA  +  +    ++ L D R  +     G  +S ++  +P  S  G+  +
Sbjct: 48  QPALSGDGRWVALVSNRNG-TNQILLYDLRAKQLVNLPGLNQSNVILESPSLSRTGRYLV 106

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                    D+   D  +  TE LT        + S SPD   IVFE+ R G+  + V  
Sbjct: 107 YISSIQGRPDVALYDRATKRTELLTQGYRSWVRNPSISPDGRYIVFETARRGQWDIEVFD 166



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 37/116 (31%), Gaps = 14/116 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYL-------------TPSRDQILFEPRFSPNQQKVAYATYD 232
           SG  +    V +R+G N   L                 + IL  P  S   + + Y +  
Sbjct: 52  SGDGRWVALVSNRNGTNQILLYDLRAKQLVNLPGLNQSNVILESPSLSRTGRYLVYISSI 111

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                 V L D    R       +RS +  P  S +G+  +    +    DI   D
Sbjct: 112 QGRP-DVALYDRATKRTELLTQGYRSWVRNPSISPDGRYIVFETARRGQWDIEVFD 166


>gi|172038833|ref|YP_001805334.1| WD repeat-containing protein [Cyanothece sp. ATCC 51142]
 gi|171700287|gb|ACB53268.1| WD-repeat protein [Cyanothece sp. ATCC 51142]
          Length = 1169

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 67/202 (33%), Gaps = 13/202 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG + N + +               +  + +  FSP+   +A  + D      + L + +
Sbjct: 656 SGGMDNQIKIWHLKTGICEQTLKGHENFINQVAFSPDGNTLATCSNDH----TIKLWNWQ 711

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
                  + +    +    +S +G   + S  +D+ + ++  D Q     + L       
Sbjct: 712 QGTCLNTLRDHDHFVRGITWSPDGHWLV-SCSEDQTVKLW--DWQQGICLKILRGHQHGV 768

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  +SPD   +    D  G  Q+ +      + ++         +   WSP G+ +A T
Sbjct: 769 WSVQWSPDGQILA-SGDVNG--QIRLWNVEKGETEKTLHQHNNWVWSLAWSPNGESLAST 825

Query: 365 KFSGEKFAIGVMKKDGSQERLL 386
              G           G   R L
Sbjct: 826 SHDGTLR--FWQPATGKCLRTL 845



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 77/231 (33%), Gaps = 17/231 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + +              Q +      P+Q   A    D+    ++ +   +
Sbjct: 614 SSSEDTTIKLWEISTGQELRQFQGHSQSVLSVSLHPHQSIFASGGMDN----QIKIWHLK 669

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
                + +    + I    FS +G     +   D  + ++  + Q       L +     
Sbjct: 670 TGICEQTLKGHENFINQVAFSPDGNTLA-TCSNDHTIKLW--NWQQGTCLNTLRDHDHFV 726

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              ++SPD   +V  S+    + + +         +I +  +   +   WSP G ++A  
Sbjct: 727 RGITWSPDGHWLVSCSE---DQTVKLWDWQQGICLKILRGHQHGVWSVQWSPDGQILASG 783

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGD 413
             +G    I +   +  +    +   N    +  WSP+G SL  S   DG 
Sbjct: 784 DVNG---QIRLWNVEKGETEKTLHQHNNWVWSLAWSPNGESLA-STSHDGT 830



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 42/298 (14%), Positives = 89/298 (29%), Gaps = 53/298 (17%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD------------ 233
            SG +   + + + +           +  ++   +SPN + +A  ++D             
Sbjct: 782  SGDVNGQIRLWNVEKGETEKTLHQHNNWVWSLAWSPNGESLASTSHDGTLRFWQPATGKC 841

Query: 234  --------------------------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                                       D  RV+  D +            S++ +   S 
Sbjct: 842  LRTLQGYQRSQRTLVWGQLGDQLICGGDDQRVHYFDFQSKTWLANFLAHESLVSSLAISQ 901

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            + +    +V  D ++ I+ ++  S  ++ L +  +I  S S+ P+  +I   S     + 
Sbjct: 902  DEQFLA-TVSHDRSLKIWQLNANSCLSKVLAHDNWI-WSVSWHPEGDRIATGSV---DQT 956

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLL 386
            + +               ++     VWSP G  +A          + V         + L
Sbjct: 957  VKIWHFPSLQCLYQLVGHQSWVLSVVWSPDGRFLASGSAD---HTVRVWNSKTGNCVQCL 1013

Query: 387  VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWV 443
              +  +    WSP+ R L       G     L+  D+     + L           W 
Sbjct: 1014 PHNEIVWCVAWSPNSRYLAV-----GCQDHHLWLWDVQQETYQRLTGHQGTVKAIAWS 1066



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 80/213 (37%), Gaps = 14/213 (6%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                SL +   +  +      + D  ++   + P   ++A  + D      V +      
Sbjct: 910  SHDRSLKIWQLNANSCLSKVLAHDNWIWSVSWHPEGDRIATGSVDQ----TVKIWHFPSL 965

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            +   ++   +S +L+  +S +G+    S   D  + ++  + ++    +      I    
Sbjct: 966  QCLYQLVGHQSWVLSVVWSPDGRFLA-SGSADHTVRVW--NSKTGNCVQCLPHNEIVWCV 1022

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            ++SP+S  +     ++    L++        +R++   + +     WS +G L+A +   
Sbjct: 1023 AWSPNSRYLA-VGCQDH--HLWLWDVQQETYQRLT-GHQGTVKAIAWSREGQLMA-SGDD 1077

Query: 368  GEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSP 399
                 +    KDGS    +   D ++ A ++ P
Sbjct: 1078 VGNIKLW-SGKDGSYLNTIEGHDRSILALSFHP 1109



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 80/256 (31%), Gaps = 52/256 (20%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++ + D        +       ++  ++SP+ Q +A    +     ++ L +       K
Sbjct: 746 TVKLWDWQQGICLKILRGHQHGVWSVQWSPDGQILASGDVNG----QIRLWNVEKGETEK 801

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-------SVDLQSNATERLT------ 298
            +    + + +  +S NG+    S   D  +  +          LQ     + T      
Sbjct: 802 TLHQHNNWVWSLAWSPNGESLA-STSHDGTLRFWQPATGKCLRTLQGYQRSQRTLVWGQL 860

Query: 299 ----------------------------NTLFINISASYSPDSSQIVFES-DREGKEQLY 329
                                           +  S + S D   +   S DR  K  ++
Sbjct: 861 GDQLICGGDDQRVHYFDFQSKTWLANFLAHESLVSSLAISQDEQFLATVSHDRSLK--IW 918

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            + +N    K ++ D     +   W P+GD IA T    +   I          +L+   
Sbjct: 919 QLNANSCLSKVLAHD--NWIWSVSWHPEGDRIA-TGSVDQTVKIWHFPSLQCLYQLVGHQ 975

Query: 390 SNLQAPTWSPSGRSLI 405
           S + +  WSP GR L 
Sbjct: 976 SWVLSVVWSPDGRFLA 991



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/176 (13%), Positives = 64/176 (36%), Gaps = 21/176 (11%)

Query: 154  IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            +AH   + I+      +GD           + +G +  ++ +         Y        
Sbjct: 930  LAH--DNWIWSVSWHPEGD----------RIATGSVDQTVKIWHFPSLQCLYQLVGHQSW 977

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +    +SP+ + +A  + D      V + +++     + +     ++    +S N +   
Sbjct: 978  VLSVVWSPDGRFLASGSADH----TVRVWNSKTGNCVQCL-PHNEIVWCVAWSPNSRYLA 1032

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +   +D  + ++  D+Q    +RLT       + ++S +   +    D  G  +L+
Sbjct: 1033 V-GCQDHHLWLW--DVQQETYQRLTGHQGTVKAIAWSREGQLMA-SGDDVGNIKLW 1084


>gi|219848715|ref|YP_002463148.1| NB-ARC domain-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219542974|gb|ACL24712.1| NB-ARC domain protein [Chloroflexus aggregans DSM 9485]
          Length = 1454

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 77/272 (28%), Gaps = 29/272 (10%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    ++ V +    N+          +     SP+   +   ++D      V + + 
Sbjct: 726 VSGSWDRTVKVWEAATGNLLRSLEGHTGWVTAVALSPDGGWIVSGSWDR----TVKVWEA 781

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R  + +      + A   S +G   + S   D+ + ++           L       
Sbjct: 782 ATGRLLRSLEGHTGWVTAVAVSPDGGWIV-SGSNDKTVKVWEA-ATGRLLRSLEGRTGWV 839

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + + SPD   IV  S       + V ++      R  +           SP G  I   
Sbjct: 840 TAVAVSPDGGWIVSGS---WDRTVKVWEAATGRLLRSLEGHTDGVTAVAVSPDGGWIVSG 896

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI- 421
            +      + V +         +E     +     SP G  ++   +   D   K++   
Sbjct: 897 SWDRT---VKVWEAATGNLLRSLEGHTEPVTVVAVSPDGGWIVSGSR---DRTVKVWEAA 950

Query: 422 ------DLNGRNETLI-----NTPAYASDPQW 442
                  L G  E +          +     W
Sbjct: 951 TGRLLRSLEGHTEPVTAVAVSPDGGWIVSGSW 982



 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 75/271 (27%), Gaps = 27/271 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    ++ V +     +          +     SP+   +   ++D      V + + 
Sbjct: 600 VSGSWDRTVKVWEAATGRLLRSLEGHTGWVTAVAVSPDGGWIVSGSWDR----TVKVWEA 655

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R  + +      + A   S +G   + S   D  + ++           L       
Sbjct: 656 ATGRLLRSLEGRTGWVTAVAVSPDGGWIV-SGSWDRTVKVWEA-ATGRLLRSLEGHTDGV 713

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + + SPD   IV  S       + V ++   +  R  +           SP G  I   
Sbjct: 714 TAVAVSPDGGWIVSGS---WDRTVKVWEAATGNLLRSLEGHTGWVTAVALSPDGGWIVSG 770

Query: 365 KFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-- 421
            +      +      G   R L      + A   SP G  ++       D   K++    
Sbjct: 771 SWD-RTVKVW-EAATGRLLRSLEGHTGWVTAVAVSPDGGWIV---SGSNDKTVKVWEAAT 825

Query: 422 -----DLNGRN-----ETLINTPAYASDPQW 442
                 L GR        +     +     W
Sbjct: 826 GRLLRSLEGRTGWVTAVAVSPDGGWIVSGSW 856



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 68/222 (30%), Gaps = 12/222 (5%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VSG    ++ V +     +          +     SP+   +   ++D      V + + 
Sbjct: 852  VSGSWDRTVKVWEAATGRLLRSLEGHTDGVTAVAVSPDGGWIVSGSWDR----TVKVWEA 907

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                  + +      +     S +G   + S  +D  + ++           L       
Sbjct: 908  ATGNLLRSLEGHTEPVTVVAVSPDGGWIV-SGSRDRTVKVWEA-ATGRLLRSLEGHTEPV 965

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             + + SPD   IV  S       + V ++   +  R  +    +      SP G  I   
Sbjct: 966  TAVAVSPDGGWIVSGS---WDRTVKVWEAATGNLLRSLEGHRWAVTAVALSPDGRFIVSG 1022

Query: 365  KFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLI 405
               G     G   + G   R L     ++ A   SP GR ++
Sbjct: 1023 SADGTVKVWGW--EAGRLLRSLEGHTRDVNAVAVSPDGRFIV 1062



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 68/222 (30%), Gaps = 12/222 (5%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VSG    ++ V +     +        + +     SP+   +   ++D      V + + 
Sbjct: 936  VSGSRDRTVKVWEAATGRLLRSLEGHTEPVTAVAVSPDGGWIVSGSWDR----TVKVWEA 991

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                  + +   R  + A   S +G+  + S   D  + ++  +        L       
Sbjct: 992  ATGNLLRSLEGHRWAVTAVALSPDGRFIV-SGSADGTVKVWGWEA-GRLLRSLEGHTRDV 1049

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             + + SPD     F         + V ++   +  R  +    +      SP G  I  +
Sbjct: 1050 NAVAVSPDGR---FIVSGSADGTVKVWEAATGNLLRSLEGHRWAVTAVAVSPDGRFIV-S 1105

Query: 365  KFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLI 405
                    +      G   R L     ++ A   SP G  ++
Sbjct: 1106 GSRDRTVKVW-EAATGRLLRSLEGHTRDVNAVAVSPDGGWIV 1146



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 57/201 (28%), Gaps = 14/201 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                 ++     SP+   +   ++D      V + +    R  + +      + A   S
Sbjct: 580 LEGHTSVVTAVALSPDGGWIVSGSWDR----TVKVWEAATGRLLRSLEGHTGWVTAVAVS 635

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G   + S   D  + ++           L        + + SPD   IV  S      
Sbjct: 636 PDGGWIV-SGSWDRTVKVWEA-ATGRLLRSLEGRTGWVTAVAVSPDGGWIVSGS---WDR 690

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--R 384
            + V ++      R  +           SP G  I    +      + V +         
Sbjct: 691 TVKVWEAATGRLLRSLEGHTDGVTAVAVSPDGGWIVSGSWDRT---VKVWEAATGNLLRS 747

Query: 385 LLVEDSNLQAPTWSPSGRSLI 405
           L      + A   SP G  ++
Sbjct: 748 LEGHTGWVTAVALSPDGGWIV 768



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 66/222 (29%), Gaps = 16/222 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRID 247
           +  L      GA   +L P+    L  P  +P+    A               L D R  
Sbjct: 515 RLRLEDYHIAGA-PEWLFPALYNHLTWPD-APDGPLHALCEAARPARRNWLRALQDPRPQ 572

Query: 248 RAP--KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             P  + +    S++ A   S +G   + S   D  + ++           L        
Sbjct: 573 PPPWLRSLEGHTSVVTAVALSPDGGWIV-SGSWDRTVKVWEA-ATGRLLRSLEGHTGWVT 630

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + + SPD   IV  S       + V ++      R  + +         SP G  I    
Sbjct: 631 AVAVSPDGGWIVSGS---WDRTVKVWEAATGRLLRSLEGRTGWVTAVAVSPDGGWIVSGS 687

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
           +      + V +    +    +E       A   SP G  ++
Sbjct: 688 WDRT---VKVWEAATGRLLRSLEGHTDGVTAVAVSPDGGWIV 726



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 72/222 (32%), Gaps = 12/222 (5%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VSG    ++ V +    N+          +     SP+ + +   + D      V + + 
Sbjct: 1062 VSGSADGTVKVWEAATGNLLRSLEGHRWAVTAVAVSPDGRFIVSGSRDR----TVKVWEA 1117

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               R  + +      + A   S +G   + S   D+ + ++  +        L     + 
Sbjct: 1118 ATGRLLRSLEGHTRDVNAVAVSPDGGWIV-SGSSDDTVKVWEQE-TGRLLRSLEGHTSVV 1175

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             + + S D   +V  SD      + V +       R  +   +       S  G L+  +
Sbjct: 1176 NAVALSADGRLVVSGSD---DHTVKVWEQETGRLLRSLEGHTSVVNAVALSADGRLVV-S 1231

Query: 365  KFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLI 405
              + +   +   ++ G   R L      + A   S  GR ++
Sbjct: 1232 GSNDKTVKVW-ERETGRLLRSLEGHTGGVTAVALSADGRLVV 1272



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 80/239 (33%), Gaps = 20/239 (8%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VVSG    ++ V +R+   +          +     S + + V   + D      V + +
Sbjct: 1229 VVSGSNDKTVKVWERETGRLLRSLEGHTGGVTAVALSADGRLVVSGSDDK----TVKVWE 1284

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                R  + +    S++ A   S++G+  + S   D  + ++  +        L      
Sbjct: 1285 WETGRLLRSLEGHTSLVTAVALSADGRFIV-SGSDDHTVKVWERE-TGRLLRSLEGHTGW 1342

Query: 304  NISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              + + S D   IV  S DR     + V +       R  +   +       S  G L+ 
Sbjct: 1343 VRAVALSADGRFIVSGSADRT----VKVWEQETGRLLRSLEGHTSVVTAVALSADGRLVV 1398

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                  +   +     +  Q  LL   D+++ +   S   R+L       GD   +++ 
Sbjct: 1399 ---SGSDDHTLRSWDLESGQSCLLFWNDTSILSLALSGDDRTLAC-----GDKQGRVWI 1449


>gi|329934328|ref|ZP_08284407.1| WD-40 repeat protein [Streptomyces griseoaurantiacus M045]
 gi|329305924|gb|EGG49779.1| WD-40 repeat protein [Streptomyces griseoaurantiacus M045]
          Length = 437

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 71/214 (33%), Gaps = 10/214 (4%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++ +  R G     +       +F   FSP+ + +A A  D     RV L D    R   
Sbjct: 116 TVRLWHRRGHRPAGVLRGHRGAVFTVAFSPDGRLLASAGADR----RVRLWDPAGRRPLA 171

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +      +    FS +G+    S   D  + ++ V  +      L        + ++SP
Sbjct: 172 TLRGHGGSVFGVAFSPDGRVLA-SASADRTVRLWDV-RRHRELGTLAAHQDFVNAVAFSP 229

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   +   SD      + +          + +    +     ++P G  +A +  +    
Sbjct: 230 DGRTLASGSD---DLTVRLWDVASRAPLGVLRGHHGAVRSVSFAPGGRRLA-SSGNDGTV 285

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +       S   L      ++A  +SP G +L 
Sbjct: 286 RVWDTSSGHSLATLTGHTGAVRAVAFSPDGDTLA 319



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 50/308 (16%), Positives = 96/308 (31%), Gaps = 17/308 (5%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSL 193
           D + +       +   W +  H  +      + G +G   +        +  S      +
Sbjct: 104 DGRLLAAAGADGTVRLWHRRGHRPA----GVLRGHRGAVFTVAFSPDGRLLASAGADRRV 159

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            + D  G             +F   FSP+ + +A A+ D      V L D R  R    +
Sbjct: 160 RLWDPAGRRPLATLRGHGGSVFGVAFSPDGRVLASASADR----TVRLWDVRRHRELGTL 215

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPD 312
              +  + A  FS +G+    S   D  + ++  D+ S A    L        S S++P 
Sbjct: 216 AAHQDFVNAVAFSPDGRTLA-SGSDDLTVRLW--DVASRAPLGVLRGHHGAVRSVSFAPG 272

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             ++   S  +G  +++   ++             +     +SP GD +A +        
Sbjct: 273 GRRLA-SSGNDGTVRVW--DTSSGHSLATLTGHTGAVRAVAFSPDGDTLA-SGGIDGTLR 328

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +    +      L      +   T++P G   +            L           L+ 
Sbjct: 329 LWDAVRHRPGPVLTGRGGAVWGVTFAPGGTRPVSCGTDGTVRRWSLGPAARAAAIRALVG 388

Query: 433 TPAYASDP 440
            PA A  P
Sbjct: 389 APAPAGFP 396



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 65/204 (31%), Gaps = 31/204 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GRV+        V  RLWDV+  +++               AH   D +        G  
Sbjct: 189 GRVLASASADRTV--RLWDVRRHRELGTL-----------AAHQ--DFVNAVAFSPDG-- 231

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    ++ SG    ++ + D        +       +    F+P  +++A      
Sbjct: 232 --------RTLASGSDDLTVRLWDVASRAPLGVLRGHHGAVRSVSFAPGGRRLA----SS 279

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            +   V + DT    +   +      + A  FS +G     S   D  + ++   ++   
Sbjct: 280 GNDGTVRVWDTSSGHSLATLTGHTGAVRAVAFSPDGDTLA-SGGIDGTLRLWDA-VRHRP 337

Query: 294 TERLTNTLFINISASYSPDSSQIV 317
              LT         +++P  ++ V
Sbjct: 338 GPVLTGRGGAVWGVTFAPGGTRPV 361


>gi|313126906|ref|YP_004037176.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Halogeometricum
           borinquense DSM 11551]
 gi|312293271|gb|ADQ67731.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Halogeometricum
           borinquense DSM 11551]
          Length = 727

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 57/297 (19%), Positives = 97/297 (32%), Gaps = 67/297 (22%)

Query: 175 SRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            R  FV+        +   SL V+  DG+   +    R      P +SP+  ++A+    
Sbjct: 25  DRAAFVASESDPDEDERLASLFVVPTDGSREPHRLT-RVSTAASPTWSPDGDRLAFVAAR 83

Query: 233 DEDILRVY------------LMDTRIDRAPKRIGNFRSMILAPRFSSNG---KRALISVQ 277
            ED  R              +  T  DR    I        +    S+G        +  
Sbjct: 84  TEDTARRVGRSRDEETADDDIEATSGDRDEADIEADELDGTSEDGESDGASEDEHQSAGD 143

Query: 278 KDEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFES-------------DRE 323
            +    ++  DL       ++T+      +  +SPD  ++V  +              RE
Sbjct: 144 DEPKPQVWVFDLALGGDARQVTDFDDGVKAFDWSPDGDRMVVSARDPTEEEREYLDERRE 203

Query: 324 GKE---------------------QLYVMQSNGSDQKRISQDKEASYFD------PVWSP 356
           G                        L+V+ +   D  R+   +     D      P W P
Sbjct: 204 GGPIETERLQHKFDGAGYLDTVTTYLFVVDAESGDTGRLDDARGGGASDDQFGMMPTWGP 263

Query: 357 QGDLIAFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIF 406
             D IA+T + GE+        +  ++ DGS++R   +   +   P WSP G  L F
Sbjct: 264 N-DRIAYTAYEGERSDDTFIRDVYSIRPDGSEKRRHTDGERVTLLPQWSPDGSRLAF 319



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/241 (20%), Positives = 90/241 (37%), Gaps = 31/241 (12%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRY 205
           + +  R  A   +D++    T E G+ +       +S      K  + V D   G + R 
Sbjct: 106 ATSGDRDEADIEADEL--DGTSEDGESDGASEDEHQSAGDDEPKPQVWVFDLALGGDARQ 163

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +T   D +     +SP+  ++  +  D  +  R YL + R     +              
Sbjct: 164 VTDFDDGVKAF-DWSPDGDRMVVSARDPTEEEREYLDERREGGPIETERLQHKF------ 216

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-------ASYSPDSSQIVF 318
             +G   L +V       ++ VD +S  T RL +      S        ++ P+  +I +
Sbjct: 217 --DGAGYLDTVT----TYLFVVDAESGDTGRLDDARGGGASDDQFGMMPTWGPN-DRIAY 269

Query: 319 E------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                  SD      +Y ++ +GS+++R   D E     P WSP G  +AF     E + 
Sbjct: 270 TAYEGERSDDTFIRDVYSIRPDGSEKRR-HTDGERVTLLPQWSPDGSRLAFNGGDAENWH 328

Query: 373 I 373
           +
Sbjct: 329 L 329



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 61/175 (34%), Gaps = 27/175 (15%)

Query: 261 LAPRFSSNGKRALISVQKDEAMD------IYSVDLQS-NATERLTNTLFINISASYSPDS 313
            A   S  G RA     + +  +      ++ V         RLT  +    S ++SPD 
Sbjct: 16  SAVALSPTGDRAAFVASESDPDEDERLASLFVVPTDGSREPHRLTR-VSTAASPTWSPDG 74

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQ-----KRISQDKEASYFDPV----WSPQGDL---I 361
            ++ F + R       V +S   +      +  S D++ +  +       S  G+     
Sbjct: 75  DRLAFVAARTEDTARRVGRSRDEETADDDIEATSGDRDEADIEADELDGTSEDGESDGAS 134

Query: 362 AFTKFSGE----KFAIGVMKKD-GSQERLLVE-DSNLQAPTWSPSG-RSLIFSRK 409
                S      K  + V     G   R + + D  ++A  WSP G R ++ +R 
Sbjct: 135 EDEHQSAGDDEPKPQVWVFDLALGGDARQVTDFDDGVKAFDWSPDGDRMVVSARD 189



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 7/84 (8%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGS-QERLLVEDSNLQA 394
           +     S      SP GD  AF     +         + V+  DGS +   L   S   +
Sbjct: 8   TFYDLTSLSAVALSPTGDRAAFVASESDPDEDERLASLFVVPTDGSREPHRLTRVSTAAS 67

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKL 418
           PTWSP G  L F   +  DT  ++
Sbjct: 68  PTWSPDGDRLAFVAARTEDTARRV 91


>gi|218248216|ref|YP_002373587.1| WD40 domain-containing protein beta Propeller [Cyanothece sp. PCC
           8801]
 gi|218168694|gb|ACK67431.1| WD40 domain protein beta Propeller [Cyanothece sp. PCC 8801]
          Length = 190

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 9/129 (6%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS------AS 308
           N R     P  S +G+   +   ++    I   DL+    ++L N   +N S       S
Sbjct: 41  NSRYNDQQPALSGDGRWVALVSNRNGTNQILLYDLR---AKQLVNLPGLNQSNVILESPS 97

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S     +V+ S  +G+  + +        + ++Q   +   +P  SP G  I F     
Sbjct: 98  LSRTGRYLVYISSIQGRPDVALYDRATKRTELLTQGYRSWVRNPSISPDGRYIVFETARR 157

Query: 369 EKFAIGVMK 377
            ++ I V  
Sbjct: 158 GQWDIEVFD 166



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 46/126 (36%), Gaps = 4/126 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSP 356
           N+ + +   + S D   +   S+R G  Q+ +          +    +++     P  S 
Sbjct: 41  NSRYNDQQPALSGDGRWVALVSNRNGTNQILLYDLRAKQLVNLPGLNQSNVILESPSLSR 100

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDT 414
            G  + +      +  + +  +   +  LL +        P+ SP GR ++F   + G  
Sbjct: 101 TGRYLVYISSIQGRPDVALYDRATKRTELLTQGYRSWVRNPSISPDGRYIVFETARRGQW 160

Query: 415 GSKLYS 420
             +++ 
Sbjct: 161 DIEVFD 166



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRAL 273
           +P  S + + VA  +  +    ++ L D R  +     G  +S ++  +P  S  G+  +
Sbjct: 48  QPALSGDGRWVALVSNRNG-TNQILLYDLRAKQLVNLPGLNQSNVILESPSLSRTGRYLV 106

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                    D+   D  +  TE LT        + S SPD   IVFE+ R G+  + V  
Sbjct: 107 YISSIQGRPDVALYDRATKRTELLTQGYRSWVRNPSISPDGRYIVFETARRGQWDIEVFD 166



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 37/116 (31%), Gaps = 14/116 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYL-------------TPSRDQILFEPRFSPNQQKVAYATYD 232
           SG  +    V +R+G N   L                 + IL  P  S   + + Y +  
Sbjct: 52  SGDGRWVALVSNRNGTNQILLYDLRAKQLVNLPGLNQSNVILESPSLSRTGRYLVYISSI 111

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                 V L D    R       +RS +  P  S +G+  +    +    DI   D
Sbjct: 112 QGRP-DVALYDRATKRTELLTQGYRSWVRNPSISPDGRYIVFETARRGQWDIEVFD 166


>gi|75906745|ref|YP_321041.1| WD-40-like protein beta propeller repeat-containing protein
           [Anabaena variabilis ATCC 29413]
 gi|75700470|gb|ABA20146.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 172

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 58/142 (40%), Gaps = 5/142 (3%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SAS 308
           R  N  +  L P+ S  G+  + +  +  + D+Y  D  +     L     ++      S
Sbjct: 33  RSINSLASELNPQIS--GRYIVFTSDRRGSQDVYMFDTLTQNLVDLPGLNALDTIASHPS 90

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S D   +VF + R+G+  +++        + ++ + +A   +P  S  G+ IAF   + 
Sbjct: 91  ASADGRYVVFAASRQGRSAIFIYDRETRQLRNLTNNLQAEVRNPTISADGNAIAFESSNN 150

Query: 369 EKFAIGVMKKDGSQERLLVEDS 390
            ++ + V  + G    +  +  
Sbjct: 151 GQWDVLVYNRSGQPVNVPQDPR 172



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 57/159 (35%), Gaps = 10/159 (6%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               + S         R  N+L   ++   S     IVF SDR G + +Y+  +   +  
Sbjct: 19  GYPRLVSYPFDPGG--RSINSLASELNPQIS--GRYIVFTSDRRGSQDVYMFDTLTQNLV 74

Query: 340 RISQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--P 395
            +      +     P  S  G  + F      + AI +  ++  Q R L  +   +   P
Sbjct: 75  DLPGLNALDTIASHPSASADGRYVVFAASRQGRSAIFIYDRETRQLRNLTNNLQAEVRNP 134

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           T S  G ++ F    +G     +Y  + +G+   +   P
Sbjct: 135 TISADGNAIAFESSNNGQWDVLVY--NRSGQPVNVPQDP 171



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 57/152 (37%), Gaps = 11/152 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G  +      D  G +I  L          P+ S   + + + + D      VY+ DT  
Sbjct: 19  GYPRLVSYPFDPGGRSINSL-----ASELNPQIS--GRYIVFTS-DRRGSQDVYMFDTLT 70

Query: 247 DRAPKRIG--NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                  G     ++   P  S++G+  + +  +     I+  D ++     LTN L   
Sbjct: 71  QNLVDLPGLNALDTIASHPSASADGRYVVFAASRQGRSAIFIYDRETRQLRNLTNNLQAE 130

Query: 305 I-SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + + + S D + I FES   G+  + V   +G
Sbjct: 131 VRNPTISADGNAIAFESSNNGQWDVLVYNRSG 162


>gi|170102003|ref|XP_001882218.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164643033|gb|EDR07287.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1519

 Score = 77.4 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 88/264 (33%), Gaps = 32/264 (12%)

Query: 185  VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VSG    ++ + D + G  +          +    FS + + +   ++D      + L D
Sbjct: 908  VSGSFDRTIRLWDPQTGKLVLDPFEGHTDHVTSVAFSHDGKYIVSGSWDK----TIRLWD 963

Query: 244  TRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLT 298
             +  +    +  F      + +  FS NGK  + S   D+ + ++  D Q+         
Sbjct: 964  AKTGKL--VLDPFEGHTHYVTSVAFSPNGKYIV-SGSFDKTIRLW--DPQTKKLVLHPFE 1018

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQ 357
                   S ++SPD   IV  S     + + +  S          +    Y     +SP 
Sbjct: 1019 GHTHYVTSVAFSPDGKYIVSGSF---DKTIRLWDSQTKKLVLHPFEGHTHYVTSVAFSPD 1075

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  I    F      I +      +  L         + +  +SP G+ ++       D 
Sbjct: 1076 GKYIVSGSFDKT---IRIWDSQTKKLVLHPFEGHTYYVTSVAFSPDGKYIVSGSY---DN 1129

Query: 415  GSKLYSIDLNGRNETLINTPAYAS 438
              +L+    + +   L++ P   S
Sbjct: 1130 TIRLW----DPKTGKLVSDPFEGS 1149



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 93/316 (29%), Gaps = 66/316 (20%)

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                    RLWD +  K ++               HT  D +        G         
Sbjct: 909  SGSFDRTIRLWDPQTGKLVLD----------PFEGHT--DHVTSVAFSHDG--------- 947

Query: 181  SESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
             + +VSG    ++ + D   G  +          +    FSPN + +   ++D      +
Sbjct: 948  -KYIVSGSWDKTIRLWDAKTGKLVLDPFEGHTHYVTSVAFSPNGKYIVSGSFDK----TI 1002

Query: 240  YLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ER 296
             L D +  +         +  + +  FS +GK  + S   D+ + ++  D Q+       
Sbjct: 1003 RLWDPQTKKLVLHPFEGHTHYVTSVAFSPDGKYIV-SGSFDKTIRLW--DSQTKKLVLHP 1059

Query: 297  LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWS 355
                     S ++SPD   IV  S     + + +  S          +    Y     +S
Sbjct: 1060 FEGHTHYVTSVAFSPDGKYIVSGSF---DKTIRIWDSQTKKLVLHPFEGHTYYVTSVAFS 1116

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGS--------------------QERLLV------ED 389
            P G  I    +      I +                          Q + LV        
Sbjct: 1117 PDGKYIVSGSYDNT---IRLWDPKTGKLVSDPFEGSCDKTIRIWDPQTKKLVLHPFEGHT 1173

Query: 390  SNLQAPTWSPSGRSLI 405
              + +  +SP G+ ++
Sbjct: 1174 YYVTSVAFSPDGKYIV 1189



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 98/312 (31%), Gaps = 35/312 (11%)

Query: 132  DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG--EKGDFNSRILFVSESVVSGII 189
            DV   +  I          +  IAH+ +  IY S           +++     + V  + 
Sbjct: 817  DVNA-RMFIEDAMKVVTTFFEPIAHS-APHIYISALPMLPSTSVIAKMYSCHFTQVVHVT 874

Query: 190  KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            +    +       I  +       +    FSP+ + +   ++D      + L D +  + 
Sbjct: 875  RGEQKIWPS----ISSILQGHVGEVLSVAFSPDGKHIVSGSFDR----TIRLWDPQTGKL 926

Query: 250  P-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINIS 306
                       + +  FS +GK  + S   D+ + ++  D ++                S
Sbjct: 927  VLDPFEGHTDHVTSVAFSHDGKYIV-SGSWDKTIRLW--DAKTGKLVLDPFEGHTHYVTS 983

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTK 365
             ++SP+   IV  S     + + +             +    Y     +SP G  I    
Sbjct: 984  VAFSPNGKYIVSGSF---DKTIRLWDPQTKKLVLHPFEGHTHYVTSVAFSPDGKYIVSGS 1040

Query: 366  FSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            F      I +      +  L         + +  +SP G+ ++       D   +++   
Sbjct: 1041 FDKT---IRLWDSQTKKLVLHPFEGHTHYVTSVAFSPDGKYIV---SGSFDKTIRIW--- 1091

Query: 423  LNGRNETLINTP 434
             + + + L+  P
Sbjct: 1092 -DSQTKKLVLHP 1102



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 40/340 (11%), Positives = 99/340 (29%), Gaps = 58/340 (17%)

Query: 113  TGRVIKEGKDRLRVE------FRLWDVKDRKQII----GKKFFSSPASWRKIAHTISDDI 162
               V      +  V        R+WD + +K ++    G  ++ +  ++      I    
Sbjct: 1067 VTSVAFSPDGKYIVSGSFDKTIRIWDSQTKKLVLHPFEGHTYYVTSVAFSPDGKYIVSGS 1126

Query: 163  YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSP 221
            Y +       ++ +   +      G    ++ + D     +  +        +    FSP
Sbjct: 1127 YDNTIR---LWDPKTGKLVSDPFEGSCDKTIRIWDPQTKKLVLHPFEGHTYYVTSVAFSP 1183

Query: 222  NQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMIL--------APRFSSNG 269
            + + +   + D      D     L+    +   + +    S ++            S+ G
Sbjct: 1184 DGKYIVSGSSDKTIRLWDSQTGKLVSHPFEGHTQAVTLLHSHLMENTLFQGHMTTLSNYG 1243

Query: 270  -KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----------SYSPDSSQIVF 318
             +R  IS   D+ + ++  D Q+            ++            S+    +++  
Sbjct: 1244 IQRQEISGSCDKTIRLW--DSQTKKLVLHPFEGHTDMLPLLHSHLMENTSFQGHVTKL-- 1299

Query: 319  ESDRE---------GKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
             SD             + + +  S          +    Y     +SP G  I    +  
Sbjct: 1300 -SDYGIHRQKISGSWDKTIRMWDSQTKKLVLHPFEGHTYYVTSVAFSPDGKYIVSGSWDK 1358

Query: 369  EKFAIGVMKKDGSQERL-LVEDSNLQAPT--WSPSGRSLI 405
                I +      +      E    +  +  +SP G+ ++
Sbjct: 1359 T---IRLWDPQTGKLVSHPFEGHTDRVASVAFSPDGKYIV 1395



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 78/237 (32%), Gaps = 38/237 (16%)

Query: 110  VLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKI-AHTISDDI 162
              VT  V      +  V        RLWD +  K ++   F     +   + +H + + +
Sbjct: 1174 YYVT-SVAFSPDGKYIVSGSSDKTIRLWDSQTGK-LVSHPFEGHTQAVTLLHSHLMENTL 1231

Query: 163  YQ-SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP---- 217
            +Q  +T        R        +SG    ++ + D     +  L P        P    
Sbjct: 1232 FQGHMTTLSNYGIQR------QEISGSCDKTIRLWDSQTKKL-VLHPFEGHTDMLPLLHS 1284

Query: 218  ------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR---IGNFRSM---ILAPRF 265
                   F  +  K++      + I   +    R+  +  +   +  F      + +  F
Sbjct: 1285 HLMENTSFQGHVTKLSDYGIHRQKISGSWDKTIRMWDSQTKKLVLHPFEGHTYYVTSVAF 1344

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--YSPDSSQIVFES 320
            S +GK  + S   D+ + ++  D Q+            +  AS  +SPD   IV  S
Sbjct: 1345 SPDGKYIV-SGSWDKTIRLW--DPQTGKLVSHPFEGHTDRVASVAFSPDGKYIVSGS 1398



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 26/87 (29%), Gaps = 11/87 (12%)

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA---SYFDPVWSP 356
              +   S ++SPD   IV  S     + + +        K +S   E          +SP
Sbjct: 1335 HTYYVTSVAFSPDGKYIVSGS---WDKTIRLWDPQTG--KLVSHPFEGHTDRVASVAFSP 1389

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             G  I    F      I +      + 
Sbjct: 1390 DGKYIVSGSFDKT---IRLWDSQTGKL 1413


>gi|315083641|gb|EFT55617.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL027PA2]
          Length = 1086

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 67/168 (39%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 9   PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A  F   W    + + F+            +  +  DG
Sbjct: 65  RPEVFVIDLATGDQRRLTWLGAARSFVVGWQDD-EHVVFSSPHQTNDVGLAWLYTVSLDG 123

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+   P  +P+ G    + R + G T ++++ 
Sbjct: 124 HVERLGYGPGMDLAVSSDGAVPAATPNSGDCSRWKRYRGG-TAAQIWL 170



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 78/224 (34%), Gaps = 29/224 (12%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLATGDQRRLTWLGAARS 89

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASY------FDPVWS 355
                 D   +VF S  +    G   LY +  +G   +R+                P  +
Sbjct: 90  FVVGWQDDEHVVFSSPHQTNDVGLAWLYTVSLDG-HVERLGYGPGMDLAVSSDGAVPAAT 148

Query: 356 PQ-GDLIAFTKFSGEK-FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--------LI 405
           P  GD   + ++ G     I +      +   L+ + N     ++ +GR         LI
Sbjct: 149 PNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAGRYSVGWIDGRLI 208

Query: 406 FSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
           FS     D      ++++S+D  G +            Y  DP+
Sbjct: 209 FSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPR 252



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 89/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 23  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLATGDQRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +      +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 81  LTWLGAARSFVVGW-QDDEHVVFSSPHQTNDVGLAWLYTVSLD-GHVERLGYGPGMDL-- 136

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +             ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 137 AVSSDGAVPAATPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAG 196

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  I  +   G   R        +     P   G 
Sbjct: 197 RYSVGWIDGRLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 256

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 257 TIVY------HTHGALWRMTGLDAEPERL 279



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+    +   +  + +PD +++   S      ++
Sbjct: 351 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISH---DGRI 407

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 408 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 467

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 468 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 526

Query: 442 WVGF 445
              F
Sbjct: 527 -SPF 529



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 371 GTGEIRRIAQG---QIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 420

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 421 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 480

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER--LTNTLFINISAS 308
            F+++GK   +   +  D   D  + DL    T+R  L        S  
Sbjct: 481 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEASPF 529


>gi|163848918|ref|YP_001636962.1| hypothetical protein Caur_3388 [Chloroflexus aurantiacus J-10-fl]
 gi|222526875|ref|YP_002571346.1| hypothetical protein Chy400_3652 [Chloroflexus sp. Y-400-fl]
 gi|163670207|gb|ABY36573.1| hypothetical protein Caur_3388 [Chloroflexus aurantiacus J-10-fl]
 gi|222450754|gb|ACM55020.1| conserved hypothetical protein [Chloroflexus sp. Y-400-fl]
          Length = 421

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 52/275 (18%), Positives = 104/275 (37%), Gaps = 22/275 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           SR+ ++S+   +    + L V+         L  S         +SP+ + +++ +    
Sbjct: 82  SRVAYISQQGNT----SVLRVIHLQSGTRTELYRSTTNPPLYMVWSPDGRYLSFLSNRGV 137

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             L V+++ +   R  + I    S +    +  N    L+ +      D   + +Q    
Sbjct: 138 GGLGVHIVPSDGSRDAELISVSPSSLY-VAWQPNSSSLLVHIGGSIFEDGRVITVQPGRQ 196

Query: 295 ERL---TNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSN------GSDQKRISQ 343
           + L   T+  F  +  ++S D     + +    EG   +  ++S       G  Q ++  
Sbjct: 197 QPLHEVTDPGFFQV-PAWSVDGESFFYVAQPPIEGPPTVDKVESVLTRVKVGEMQPQVLA 255

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            +  +      SPQ D IA+T    + F  + ++  DGS   L   D ++ A  WSP G+
Sbjct: 256 REPMAAIIFGRSPQSDEIAYTTVGPDGFGPLKLVALDGSVRTLSAADDDVVAFFWSPDGQ 315

Query: 403 SLIFS----RKKDGDTGSKLYSIDLNGRNETLINT 433
            + +     R   G T  +   +   G N   + T
Sbjct: 316 QIAYLTPAGRSDSGLTQLRWQLVGREGNNPRTLTT 350



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 7/142 (4%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + +PD S++ + S +     L V+      +  + +         VWSP G  ++F   
Sbjct: 75  PALAPDGSRVAYISQQGNTSVLRVIHLQSGTRTELYRSTTNPPLYMVWSPDGRYLSFLSN 134

Query: 367 SG-EKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            G     + ++  DGS    L+    +     W P+  SL+      G        I + 
Sbjct: 135 RGVGGLGVHIVPSDGSRDAELISVSPSSLYVAWQPNSSSLL--VHIGGSIFEDGRVITVQ 192

Query: 425 -GRNETL--INTPAYASDPQWV 443
            GR + L  +  P +   P W 
Sbjct: 193 PGRQQPLHEVTDPGFFQVPAWS 214



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 3/105 (2%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             +L ++   G  Q          +  P  +P G  +A+    G    + V+        
Sbjct: 48  NRRLAIVDRQGVAQVLAEDASPELFRYPALAPDGSRVAYISQQGNTSVLRVIHLQSGTRT 107

Query: 385 LLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            L   +        WSP GR L F   + G  G  ++ +  +G  
Sbjct: 108 ELYRSTTNPPLYMVWSPDGRYLSFLSNR-GVGGLGVHIVPSDGSR 151



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 89/289 (30%), Gaps = 46/289 (15%)

Query: 161 DIYQSITGEKGD--FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           ++Y+S T       ++    ++S     G+    + ++  DG+    L       L+   
Sbjct: 108 ELYRSTTNPPLYMVWSPDGRYLSFLSNRGVGGLGVHIVPSDGSRDAELISVSPSSLYV-A 166

Query: 219 FSPNQQKV-AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           + PN   +  +      +  RV  +     +    + +       P +S +G+      Q
Sbjct: 167 WQPNSSSLLVHIGGSIFEDGRVITVQPGRQQPLHEVTD-PGFFQVPAWSVDGESFFYVAQ 225

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASY-------------SPDSSQIVFES-DRE 323
                 I            LT      +                 SP S +I + +   +
Sbjct: 226 ----PPIEGPPTVDKVESVLTRVKVGEMQPQVLAREPMAAIIFGRSPQSDEIAYTTVGPD 281

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMK 377
           G   L ++  +GS   R     +       WSP G  IA+   +G       +    ++ 
Sbjct: 282 GFGPLKLVALDGS--VRTLSAADDDVVAFFWSPDGQQIAYLTPAGRSDSGLTQLRWQLVG 339

Query: 378 KDGSQERLLV---------------EDSNLQAPTWSPSGRSLIFSRKKD 411
           ++G+  R L                +   L    WS  G +L++     
Sbjct: 340 REGNNPRTLTTFTPSQEFLAQINFFDAYALSFDLWSSDGHALVYGTNDG 388


>gi|315505761|ref|YP_004084648.1| wd40 repeat, subgroup [Micromonospora sp. L5]
 gi|315412380|gb|ADU10497.1| WD40 repeat, subgroup [Micromonospora sp. L5]
          Length = 1924

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 59/399 (14%), Positives = 115/399 (28%), Gaps = 86/399 (21%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRK---QIIGKKFFSSPASWRKIAHTISDDIYQS 165
             V   G   L          +LWD  D +   ++   +    P  WR   + ++      
Sbjct: 1496 SVRFNGDGSLLATAASDGAIQLWDTDDGQVRHELTRHRGSVWPVVWRPDQNQVATSSNDG 1555

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR------- 218
             T     ++ R   +  ++     K +      DG  +          L+EPR       
Sbjct: 1556 TTR---LWDVRSGQLQHTLRGHGRKVTALSFRDDGEVLAACGNDGVIRLWEPRTGRLVRQ 1612

Query: 219  ------------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                        F P++  VA  + D      V+L +T      + +      + A  FS
Sbjct: 1613 LASPADRLLSVVFCPDEPLVATPSGDGG----VHLWNTDTGADERELNVDTDHVWAVAFS 1668

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------- 317
             +G    ++   D+                LT       + ++SPD   I          
Sbjct: 1669 PDGD--ALATANDDDTVRLWYRRTGRHFATLTPHRGRVRTVAFSPDGETIATGCDDQAVR 1726

Query: 318  ------------------------FESD-----REGKEQL-YVMQSNGSDQKRISQDKEA 347
                                    F S+       G +    V  +   +++ +  + + 
Sbjct: 1727 LWDAATATCRLTLEHHTDRVYSVGFNSEGTLLASAGNDGTAVVWDAVTGERRLVLTEHDG 1786

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
              +   +SP G+L+A    +G+   I +      +    L      + +  +SP    L 
Sbjct: 1787 RLWSCAFSPDGNLLA---TAGDDLVIRLWDPVTGRLHGTLAAHTRRVWSVHFSPDSSLLA 1843

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                   D   +L+ +  +  +  L  T     D  W  
Sbjct: 1844 ---SAGDDGTVRLWDV-ADPEHAQLRTTLIGLPDG-WAA 1877



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 58/384 (15%), Positives = 118/384 (30%), Gaps = 62/384 (16%)

Query: 42   SANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ 101
                 PV +A++   ++  +G     V+  D   + +          Q   +     R+ 
Sbjct: 1237 EVGRLPVPVAYSPDGAVLAVGSDDGGVLLCD-TATGL-----PVRTLQGHRSRVYAVRYD 1290

Query: 102  DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA-HTISD 160
              +      LVTG           +  RLWD                   R +     + 
Sbjct: 1291 AAS----HQLVTGSA--------DLTVRLWDADHG-------------DVRHVIEDVFTG 1325

Query: 161  DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
             ++  +T  +             +V G     + + D  GA +R+  P     ++   FS
Sbjct: 1326 WVWPMLTDGR----------RGRLVVGDAAGVVRLYDTRGARLRHEWPGHSAPIWGTSFS 1375

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+ ++V  A         V   D    +    +     ++     S +G+      Q   
Sbjct: 1376 PDGRRVVVAD----SAGTVRGWDIPTGKLAFEV-QEPEVVYRVVHSPDGRLLAAVGQHG- 1429

Query: 281  AMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               ++          R       ++ A    PD + +    D  G  +L+  ++      
Sbjct: 1430 --RVWIRRATDGELLRAPRGHEADVYALDIHPDGTLMA-TGDTHGALRLW--ETETGRPV 1484

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTW 397
            R+   +  + +   ++  G L+A     G   AI +   D  Q R  L     ++    W
Sbjct: 1485 RVLGRQRGAIYSVRFNGDGSLLATAASDG---AIQLWDTDDGQVRHELTRHRGSVWPVVW 1541

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSI 421
             P    +  S     D  ++L+ +
Sbjct: 1542 RPDQNQVATSSN---DGTTRLWDV 1562



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 63/370 (17%), Positives = 104/370 (28%), Gaps = 82/370 (22%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRK---QIIGKKFFSSPASWRKIAHTIS----DDIYQSIT 167
            +V     D      RLWDV+  +    + G     +  S+R     ++    D + +   
Sbjct: 1547 QVATSSNDGTT---RLWDVRSGQLQHTLRGHGRKVTALSFRDDGEVLAACGNDGVIRLWE 1603

Query: 168  GEKGDFNSRILFVSES--------------VVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
               G    ++   ++                 SG     L   D  GA+ R L    D +
Sbjct: 1604 PRTGRLVRQLASPADRLLSVVFCPDEPLVATPSGDGGVHLWNTD-TGADERELNVDTDHV 1662

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             +   FSP+   +A A  DD     V L   R  R    +   R  +    FS +G+   
Sbjct: 1663 -WAVAFSPDGDALATANDDD----TVRLWYRRTGRHFATLTPHRGRVRTVAFSPDGETIA 1717

Query: 274  -----------------------------------------ISVQKDEAMDIYSVDLQSN 292
                                                      S   D    ++  D  + 
Sbjct: 1718 TGCDDQAVRLWDAATATCRLTLEHHTDRVYSVGFNSEGTLLASAGNDGTAVVW--DAVTG 1775

Query: 293  ATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                 LT       S ++SPD + +    D      + +                   + 
Sbjct: 1776 ERRLVLTEHDGRLWSCAFSPDGNLLATAGD---DLVIRLWDPVTGRLHGTLAAHTRRVWS 1832

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +SP   L+A     G      V   + +Q R  +          SP GR      K D
Sbjct: 1833 VHFSPDSSLLASAGDDGTVRLWDVADPEHAQLRTTLIGLPDGWAAVSPDGRY-----KLD 1887

Query: 412  GDTGSKLYSI 421
            GD G + + +
Sbjct: 1888 GDPGGQFWHV 1897


>gi|220906140|ref|YP_002481451.1| WD-40 repeat-containing protein [Cyanothece sp. PCC 7425]
 gi|219862751|gb|ACL43090.1| WD-40 repeat protein [Cyanothece sp. PCC 7425]
          Length = 1190

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 91/247 (36%), Gaps = 25/247 (10%)

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            DF+     ++ +  +G    ++ +    G  ++ L      I     FSPN + +A AT 
Sbjct: 876  DFHPNGTLLATAGKNG----TVRLWHVSGQLLKQLQADSVGINSV-TFSPNGRLLATATQ 930

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              +    V + +   +R  +   +    +    FS +G+R   + +    +D++  +L  
Sbjct: 931  SGK----VQVWNLAGERLLQV--SQPGAVYTVAFSPDGQRLAAAGEA-RTIDLW--NLNG 981

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-----SDQKRISQDKE 346
                  +       S S+SPD  ++      +G  +L+ ++        +    +    +
Sbjct: 982  QLERSFSGHGQKVYSLSFSPDGQRLA-SGGEDGSLRLWPLRQKSLLSFPAPTPLVVNAAQ 1040

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLI 405
                   ++P+GD +      G    I      G + R      S +    +SP G+ L 
Sbjct: 1041 GWITSVSFTPRGDSLVTAGQDG---IIRFWDLAGKEIRQFRSHTSGILNLRFSPDGQMLA 1097

Query: 406  FSRKKDG 412
             +  +DG
Sbjct: 1098 -ASGQDG 1103



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 83/210 (39%), Gaps = 19/210 (9%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            T   + ILRV+          +     ++ + +  FS +G+R + ++ +D  + I+  D
Sbjct: 762 VTVGYDGILRVWRTSGEQLNQWRV---SQTPVYSLNFSPDGQRLV-TLGEDNNVRIW--D 815

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           L       L        SAS+SP    ++  +  +G  + + +      Q       + S
Sbjct: 816 LSGQLLMTLKGHERSVTSASFSPAGQSLLTTAT-DGTIRFWDLDHQSGQQ---WSAGQKS 871

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFS 407
            +   + P G L+A    +G+   + +    G   + L  DS  + + T+SP+GR L  +
Sbjct: 872 IWAVDFHPNGTLLA---TAGKNGTVRLWHVSGQLLKQLQADSVGINSVTFSPNGRLLATA 928

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            +       K+   +L G     ++ P   
Sbjct: 929 TQSG-----KVQVWNLAGERLLQVSQPGAV 953



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/258 (19%), Positives = 96/258 (37%), Gaps = 23/258 (8%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           Q +    G    R+      +V+      +   D  G  +R L P +D+ +   RFSP  
Sbjct: 606 QFMANPTGIKIMRLSPDGGELVTVSHSGQIQRWDLTGKLLRTLRP-QDKTISTLRFSPTG 664

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             +A A      I+RV+    R      +       I +  FSS+  +   +  +D  + 
Sbjct: 665 TYLAVA--GSNGIVRVW---NRQGMLLSQFPASEQAINSLSFSSDSDQIA-TAGEDGNIQ 718

Query: 284 IYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG------- 335
           ++S+  Q     +   N      S S+ P     +  S  E +EQL  +  +G       
Sbjct: 719 LWSLTGQLQGKWQNYRNGSVPLKSISFRP---LPLLSSSSEQQEQLVTVGYDGILRVWRT 775

Query: 336 -SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQ 393
             +Q    +  +   +   +SP G  +      GE   + +    G     L   + ++ 
Sbjct: 776 SGEQLNQWRVSQTPVYSLNFSPDGQRLV---TLGEDNNVRIWDLSGQLLMTLKGHERSVT 832

Query: 394 APTWSPSGRSLIFSRKKD 411
           + ++SP+G+SL+ +    
Sbjct: 833 SASFSPAGQSLLTTATDG 850


>gi|154493741|ref|ZP_02033061.1| hypothetical protein PARMER_03082 [Parabacteroides merdae ATCC
           43184]
 gi|154086491|gb|EDN85536.1| hypothetical protein PARMER_03082 [Parabacteroides merdae ATCC
           43184]
          Length = 490

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 78/497 (15%), Positives = 149/497 (29%), Gaps = 110/497 (22%)

Query: 6   FIAEELNMKINLC--LLLVLIGGFFPTSIHAFVKVATN-----SANYSPVSIAFTKFVSI 58
            +  ++N  I L   LL     G  P  I   ++   +          P++IA   F  +
Sbjct: 1   MMETKINWMICLLAGLLFGACSGNRPVQIQGVLEADPDIFPDYKGVTVPMNIAPLNFSYL 60

Query: 59  DELG-GKVSEVVSKDLQ----RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVT 113
                  V EV   +L     R  +F      SF         +  ++DW          
Sbjct: 61  GNEPCRLVVEVAGHELMQMEGRRGLF------SFP--------VSDWKDW---------M 97

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR      D LR+    +                   W++     S  IY +        
Sbjct: 98  GRY---AGDSLRLTVLAY---------------QSDQWKRY---RSFSIYIAPDSIDSYL 136

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + R++         +      + D +   I        + +        +  ++ +  + 
Sbjct: 137 SYRLVPPGYEGWREMGIYQRDLSDYEQRPILENRLTKGNCVNCHAYCERDPSRMMF--HA 194

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------------- 278
             D+    ++   +              + P +  +G     S+ K              
Sbjct: 195 RADLAGTLILQDGLVEKLDVQTEQMGSFVYPYWHPSGDYIAFSMNKTRQNFYSHDPDRVE 254

Query: 279 --DEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFES----------DRE 323
             D A D+    ++ +       L +T       ++SPD   + F S           R+
Sbjct: 255 VYDTASDVVIYSVKDHKIMTSPLLRSTCAFETFPTFSPDGHFLYFCSAVAVDSLPQNCRQ 314

Query: 324 GKEQLYVMQSNGSDQKR--------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            K  L  +  +  +++          ++ +  S   P  SP G  +AFT      F+I  
Sbjct: 315 VKYSLCRIAFDFQNERLGEVVDTLYNARMEGQSVSFPRLSPDGRFLAFTLHDFGNFSIWH 374

Query: 376 MKKDGSQERLLVED------SNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYS--IDL 423
            + D     LL          N +      +WS +GR ++FS ++     ++L+   +D 
Sbjct: 375 KEADLYMLDLLTSRKYPLDVFNSEEAESYHSWSGNGRWMVFSSRRIDGLYTRLFIGYVDS 434

Query: 424 NGRNETLINTPAYASDP 440
            G        P    DP
Sbjct: 435 EGVGHKPFLLP--QKDP 449


>gi|260655601|ref|ZP_05861089.1| acylamino-acid-releasing enzyme [Jonquetella anthropi E3_33 E1]
 gi|260630049|gb|EEX48243.1| acylamino-acid-releasing enzyme [Jonquetella anthropi E3_33 E1]
          Length = 665

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 78/208 (37%), Gaps = 45/208 (21%)

Query: 263 PRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P  S +G +   +V            D++  DL S +T +LT         +++PD S +
Sbjct: 43  PTPSPDGSKIAFTVSSANLDENRYNSDLWLHDLASGSTRQLT-GSGREKFFNWTPDGSAL 101

Query: 317 VFESDREGKE----QLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLI---------- 361
           VF S+R        + + +  +G + + +        Y  P+    G  +          
Sbjct: 102 VFASERGDAPKETTRFWRLPIDGGEAQHLFDLPYQCGYIWPL--ADGKFLVKALIKAKEP 159

Query: 362 --------AFT----KFSGEKF----AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSL 404
                    FT      +G  F       ++  D S+E+ L   D +++  T SP G  +
Sbjct: 160 NPEEASYSVFTELPFSSNGSGFTPSRRWALLLWDSSEEKRLTGPDWDVEMATLSPDGSRV 219

Query: 405 IFSRKKDGDTGSK---LYSIDL-NGRNE 428
           + +     D   K   +Y IDL +G+ E
Sbjct: 220 LLTAAVWHDVRPKKNSVYEIDLASGKPE 247



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 83/267 (31%), Gaps = 47/267 (17%)

Query: 210 RDQILFEPRFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           + + L +P  SP+  K+A+        ++     ++L D       +  G+ R       
Sbjct: 36  KMKFLAQPTPSPDGSKIAFTVSSANLDENRYNSDLWLHDLASGSTRQLTGSGREKFF--N 93

Query: 265 FSSNGKRALISVQKDEAMD----IYSVDLQSNATERLTNTLFINISASYSPDSSQIV--- 317
           ++ +G   + + ++ +A       + + +     + L +  +         D   +V   
Sbjct: 94  WTPDGSALVFASERGDAPKETTRFWRLPIDGGEAQHLFDLPYQCGYIWPLADGKFLVKAL 153

Query: 318 --------------------FESDREGKEQLYVMQS---NGSDQKRISQDKEASYFDPVW 354
                               F S+  G            + S++KR++   +        
Sbjct: 154 IKAKEPNPEEASYSVFTELPFSSNGSGFTPSRRWALLLWDSSEEKRLT-GPDWDVEMATL 212

Query: 355 SPQGDLI-----AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGRSLIFS 407
           SP G  +      +     +K ++  +     +   L          ++   +GR ++ +
Sbjct: 213 SPDGSRVLLTAAVWHDVRPKKNSVYEIDLASGKPE-LKSSGLDWRFNYAGYRNGRIVVQA 271

Query: 408 RK-KDGDTGSKLYSIDLNGRNETLINT 433
                G         D++G+   LI  
Sbjct: 272 TDCVRGGLNQDYQFFDISGKKPELIAG 298



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 52/360 (14%), Positives = 106/360 (29%), Gaps = 81/360 (22%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDR--KQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           G+++  T       ++R   +  L D+     +Q+ G                      +
Sbjct: 49  GSKIAFTVSSANLDENRYNSDLWLHDLASGSTRQLTGSGR-------------------E 89

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQ 223
                  D  S ++F SE   +         +  DG   ++L     Q     P    + 
Sbjct: 90  KFFNWTPDG-SALVFASERGDAPKETTRFWRLPIDGGEAQHLFDLPYQCGYIWP--LADG 146

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +  A    ++        +     P              FSSNG     +  +  A+ 
Sbjct: 147 KFLVKALIKAKEPNPEEASYSVFTELP--------------FSSNGSG--FTPSRRWALL 190

Query: 284 IYSVDLQSNATERLTNTLFINIS-ASYSPDSSQI-----VFESDREGKEQLYVMQSNGSD 337
           ++     S+  +RLT     ++  A+ SPD S++     V+   R  K  +Y +      
Sbjct: 191 LW----DSSEEKRLT-GPDWDVEMATLSPDGSRVLLTAAVWHDVRPKKNSVYEIDLASGK 245

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTK---FSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            +  S   +  +    +   G ++         G           G +  L+  D +   
Sbjct: 246 PELKSSGLDWRFNYAGY-RNGRIVVQATDCVRGGLNQDYQFFDISGKKPELIAGDLD--- 301

Query: 395 PTWSPSG-------------------RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +W                         +I    +     S LY+++ +G    L +  A
Sbjct: 302 -SWFRDSVCCDVHYGVGERQSFYVRDGQIICLATRG--YKSNLYAVESDGAWRALTDLNA 358


>gi|148555946|ref|YP_001263528.1| peptidase S9 prolyl oligopeptidase [Sphingomonas wittichii RW1]
 gi|148501136|gb|ABQ69390.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Sphingomonas wittichii RW1]
          Length = 678

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 86/266 (32%), Gaps = 52/266 (19%)

Query: 216 EPRFSPNQQK---VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKR 271
            P+ +P+  +   +      + +     L         + +    +  ++  R++ +G++
Sbjct: 39  HPQIAPDGARASIIVSKADIEANRFTAELRVVDTRTGQEILALDPAWEVSESRWAPDGQQ 98

Query: 272 ALISVQKDEA----MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-GKE 326
             I  ++         IY +D++S    ++T      +  ++ PD   + +  +   G  
Sbjct: 99  LAIIAKRAGVKEAVAQIYVLDIKSPTPRQITQASDGIVQLAWGPDGKSVAYGREEALGLP 158

Query: 327 -------------------------QLYVMQSNGSDQKRISQDK----------EASYFD 351
                                    QL++ Q++GS +K++++              +   
Sbjct: 159 KVDGKLVSFEVKERGYLATEPRKRIQLWIAQADGSGEKQLTRGNWTLQVPYKGSGPAILP 218

Query: 352 PVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
             W P G  I     +          + ++     +   L+E D+    P  SP GR + 
Sbjct: 219 FAWFPDGKSIVVATQAEPDVNSLERALRIVDVATGEVHSLLEPDARAINPVVSPDGREVA 278

Query: 406 FSRK--KDGDTGSKLYSIDLNGRNET 429
           +             +  +D+  R   
Sbjct: 279 YWEYPRYGDAFSFSVRVVDVASRTVR 304



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 53/384 (13%), Positives = 120/384 (31%), Gaps = 73/384 (19%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           GA+  +         +R   E R+ D +  ++I+                   D  ++  
Sbjct: 46  GARASIIVSKADIEANRFTAELRVVDTRTGQEILAL-----------------DPAWEVS 88

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                    ++  +++          + V+D      R +T + D I+    + P+ + V
Sbjct: 89  ESRWAPDGQQLAIIAKRAGVKEAVAQIYVLDIKSPTPRQITQASDGIVQL-AWGPDGKSV 147

Query: 227 AYA-----------------------TYDDEDILRVYLMDTRIDRAPKRIGN-------- 255
           AY                            E   R+ L   + D + ++           
Sbjct: 148 AYGREEALGLPKVDGKLVSFEVKERGYLATEPRKRIQLWIAQADGSGEKQLTRGNWTLQV 207

Query: 256 ---FRSMILAP-RFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINIS 306
                   + P  +  +GK  +++ Q +  ++     +  VD+ +     L       I+
Sbjct: 208 PYKGSGPAILPFAWFPDGKSIVVATQAEPDVNSLERALRIVDVATGEVHSLLEPDARAIN 267

Query: 307 ASYSPDSSQIVF-ESDREG---KEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLI 361
              SPD  ++ + E  R G      + V+       +    Q  + +     W P+G  I
Sbjct: 268 PVVSPDGREVAYWEYPRYGDAFSFSVRVVDVASRTVRASPPQPLDHNLSLARWFPKGGDI 327

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGDT 414
                  ++ ++ + ++  +   + V+  NL            S +G +++F        
Sbjct: 328 LVGGDDSDRTSLWIQRR--AAPPIKVDTGNLDLAMHFRVRADMSATG-AIVFVASSPQSP 384

Query: 415 GSKLYSIDLNGRNETLINTPAYAS 438
               +  + N R   L +  A A 
Sbjct: 385 FELYFMANANARPRRLTDYNAAAR 408


>gi|83816557|ref|YP_445077.1| acylaminoacyl-peptidase [Salinibacter ruber DSM 13855]
 gi|83757951|gb|ABC46064.1| acylaminoacyl-peptidase [Salinibacter ruber DSM 13855]
          Length = 839

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 55/185 (29%), Gaps = 9/185 (4%)

Query: 218 RFSPNQQKVAYATYDDEDI------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             SP  + VAY               R+Y+  T     P+ +      I AP +  +G  
Sbjct: 5   ALSPRGRSVAYTVRRLSPGQAPAPRARLYVARTSGRDDPRLLFQDEHDIRAPAWHPDGTH 64

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                  +    ++ + L      RLT+T     +  + PD  +++F S      +  V 
Sbjct: 65  LAFVRPVNGTPQVFVIPLNGGVPYRLTDTPHGAQAPQWGPDGERLLFASH---VPEPAVR 121

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           +            + AS       P   L+     +        +  DG  +        
Sbjct: 122 RQTARRPPTERPGRTASDTIRTPPPDTLLVLRHDRTLRPVDTLAVDADGRPQTPTDTTDT 181

Query: 392 LQAPT 396
           L  P 
Sbjct: 182 LHVPR 186



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 8/113 (7%)

Query: 305 ISASYSPDSSQIVFESDR-------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              + SP    + +   R         + +LYV +++G D  R+    E     P W P 
Sbjct: 2   TEVALSPRGRSVAYTVRRLSPGQAPAPRARLYVARTSGRDDPRLLFQDEHDIRAPAWHPD 61

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRK 409
           G  +AF +       + V+  +G     L +  +  QAP W P G  L+F+  
Sbjct: 62  GTHLAFVRPVNGTPQVFVIPLNGGVPYRLTDTPHGAQAPQWGPDGERLLFASH 114



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 12/102 (11%)

Query: 353 VWSPQGDLIAFTKFS-------GEKFAIGVMKKDGSQ-ERLLVED-SNLQAPTWSPSGRS 403
             SP+G  +A+T            +  + V +  G    RLL +D  +++AP W P G  
Sbjct: 5   ALSPRGRSVAYTVRRLSPGQAPAPRARLYVARTSGRDDPRLLFQDEHDIRAPAWHPDGTH 64

Query: 404 LIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
           L F R  +G    +++ I LNG     L +TP  A  PQW  
Sbjct: 65  LAFVRPVNGT--PQVFVIPLNGGVPYRLTDTPHGAQAPQWGP 104



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 51/138 (36%), Gaps = 16/138 (11%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQD 344
               LT        A + P   Q+V           DR  +  LYV   N    +R+ + 
Sbjct: 297 TPRLLTGGYRSYGQADWLPGGEQVVVSGMPATNESPDRVRRRNLYVADLNTPRLRRLLRI 356

Query: 345 KEASYFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDG-SQERLLVE--DSNLQAPT 396
           +  +   P  +  G  +AF        S     IG+   DG SQ R+L    D ++ + T
Sbjct: 357 ENHTLTSPSVTTDGSTVAFRVESLAPSSDAPAEIGLFALDGRSQPRILTSALDRDVTSVT 416

Query: 397 WSPSGRSLIFSRKKDGDT 414
           W+P G  L  +   +G  
Sbjct: 417 WAPDGWYLYTTAPSEGGR 434



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 39/109 (35%), Gaps = 2/109 (1%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +G   +  +       +   +  L V    G +   L    +  +  P + P+   +A
Sbjct: 7   SPRGRSVAYTVRRLSPGQAPAPRARLYVARTSGRDDPRLLFQDEHDIRAPAWHPDGTHLA 66

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           +         +V+++       P R+ +      AP++  +G+R L + 
Sbjct: 67  FVR-PVNGTPQVFVIPLN-GGVPYRLTDTPHGAQAPQWGPDGERLLFAS 113



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 51/162 (31%), Gaps = 19/162 (11%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISV--------QKDEAMDIYSVDLQSNATERLTN-T 300
           P+ +           +   G++ ++S          +    ++Y  DL +    RL    
Sbjct: 298 PRLLTGGYRSYGQADWLPGGEQVVVSGMPATNESPDRVRRRNLYVADLNTPRLRRLLRIE 357

Query: 301 LFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVW 354
                S S + D S + F  +      +   ++ +   +G  Q RI +   +       W
Sbjct: 358 NHTLTSPSVTTDGSTVAFRVESLAPSSDAPAEIGLFALDGRSQPRILTSALDRDVTSVTW 417

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +P G  +  T  S     +               D   QAP+
Sbjct: 418 APDGWYLYTTAPSEGGRPLFRFTP----FAQDTTDGAPQAPS 455



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 48/143 (33%), Gaps = 14/143 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATY-------DDEDILRVYLMDTRIDRAPKRIGNFR 257
            L     +   +  + P  ++V  +         D      +Y+ D    R  + +    
Sbjct: 299 RLLTGGYRSYGQADWLPGGEQVVVSGMPATNESPDRVRRRNLYVADLNTPRLRRLLRIEN 358

Query: 258 SMILAPRFSSNGKRALISV-----QKDEAMDIYSVDLQSNATER-LTNTLFIN-ISASYS 310
             + +P  +++G      V       D   +I    L   +  R LT+ L  +  S +++
Sbjct: 359 HTLTSPSVTTDGSTVAFRVESLAPSSDAPAEIGLFALDGRSQPRILTSALDRDVTSVTWA 418

Query: 311 PDSSQIVFESDREGKEQLYVMQS 333
           PD   +   +  EG   L+    
Sbjct: 419 PDGWYLYTTAPSEGGRPLFRFTP 441


>gi|157963221|ref|YP_001503255.1| peptidase S9 prolyl oligopeptidase [Shewanella pealeana ATCC
           700345]
 gi|157848221|gb|ABV88720.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella pealeana ATCC 700345]
          Length = 680

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 54/277 (19%), Positives = 99/277 (35%), Gaps = 30/277 (10%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-IL 237
                V        L + D+DG + +    ++     E  FSP+ + +A+ +  DED   
Sbjct: 53  VTQYDVPEDKGSTQLWLFDKDG-DSQQALTAKGMRASEATFSPDGKTLAFISKRDEDEAG 111

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQS 291
           +VYL+        +++ +    +   ++   GK      +       DE       D  +
Sbjct: 112 QVYLLPMNGPGEAQKLTDVPGGVYGMKW--VGKHIYFISRIFPGKNWDEMAKQLKADKDT 169

Query: 292 N-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             +  + T   + +       D    VF     G E   + Q       R SQ    S  
Sbjct: 170 KVSAHQWTELPYSSFDHWIDEDREAHVFRIPATGGEIEAITQPLSQQLPRSSQ----SAS 225

Query: 351 DPVWSPQGDLIAF----------TKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWS 398
               +P    IAF          T+    K  I + K    +   L  D+     +P +S
Sbjct: 226 SYDIAPNEQWIAFTANGWDAAMKTREVDPKIDILLAKIGSGKAENLTPDNEAPNSSPQFS 285

Query: 399 PSGRSLIFSRK-KDGDTG--SKLYSIDLNGRNETLIN 432
           P+G++L F+++   G     ++L  +D+  R   +IN
Sbjct: 286 PNGKTLAFTQQLIHGFYADTTRLVLMDMKKRQPKVIN 322



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 92/288 (31%), Gaps = 24/288 (8%)

Query: 164 QSITGEKGD-----FNSRILFVSESVVSGIIKNSLCV---MDRDGANIRYLTPSRDQILF 215
           Q +T   G      +  + ++    +  G   + +      D+D     +         F
Sbjct: 125 QKLTDVPGGVYGMKWVGKHIYFISRIFPGKNWDEMAKQLKADKDTKVSAHQWTELPYSSF 184

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----RFSSNGK 270
           +     +++   +        +          + P+   +  S  +AP      F++NG 
Sbjct: 185 DHWIDEDREAHVFRIPATGGEIEAITQPL-SQQLPRSSQSASSYDIAPNEQWIAFTANGW 243

Query: 271 RALI-SVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFE-----SDRE 323
            A + + + D  +DI    + S   E LT +    N S  +SP+   + F          
Sbjct: 244 DAAMKTREVDPKIDILLAKIGSGKAENLTPDNEAPNSSPQFSPNGKTLAFTQQLIHGFYA 303

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +L +M       K I+   + S     W+                 I  +     + 
Sbjct: 304 DTTRLVLMDMKKRQPKVINDSWDRSVSRFGWTKDSKGFYAAIDDAATSRIYHINAKNGKV 363

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           + + +D+N   P  +  G  +           ++L +I+  NG+   L
Sbjct: 364 KAISKDTNFGKPVMAKDGTIVA--TNDSFLYPARLVTINPRNGKTTRL 409



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 72/211 (34%), Gaps = 34/211 (16%)

Query: 260 ILAPRFSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +P  S  G + +  V +        +  ++  D   ++ + LT        A++SPD 
Sbjct: 37  IGSPIISPQGDKIIAPVTQYDVPEDKGSTQLWLFDKDGDSQQALTAKGMRASEATFSPDG 96

Query: 314 SQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGE 369
             + F S R+  E  Q+Y++  NG  + +   D     +   W   G  I F    F G+
Sbjct: 97  KTLAFISKRDEDEAGQVYLLPMNGPGEAQKLTDVPGGVYGMKWV--GKHIYFISRIFPGK 154

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            +     +    ++  +      + P +S     +      D D  + ++ I   G    
Sbjct: 155 NWDEMAKQLKADKDTKVSAHQWTELP-YSSFDHWI------DEDREAHVFRIPATGGEIE 207

Query: 430 LINTPAYASDP---------------QWVGF 445
            I  P     P               QW+ F
Sbjct: 208 AITQPLSQQLPRSSQSASSYDIAPNEQWIAF 238


>gi|170115912|ref|XP_001889149.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635939|gb|EDR00240.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1126

 Score = 77.4 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 48/301 (15%), Positives = 94/301 (31%), Gaps = 39/301 (12%)

Query: 121  KDRLRVEFRLWDVKDRKQII----GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                    R+WD    + I+    G       A      H +       I        S 
Sbjct: 837  SGSFDFTIRVWDALSGQSIMVIFRGSALIHKVAFSPDGKHILC-ATGNHIIRLWNALTSH 895

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGA-------NIRYLTPSRDQILFEPRFSPNQQKVAYA 229
                      G + +   V   +G        NI       D+++    FSP+ + +A  
Sbjct: 896  CTLSPLKNDEGSVNSV--VFSPNGKHILSGCLNIMGPLKGHDKMVTSVAFSPDGRYIASG 953

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            ++D    +RV+   T         G+ +  +++  FS +G+    S   D  + ++  + 
Sbjct: 954  SHDC--TVRVWDALTGQSAMDPLKGHDKG-VISVAFSPDGRYIA-SGSSDMTVRVW--NA 1007

Query: 290  QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEAS 348
             +       +  +   S ++SPD   IV  SD    + + V  S+         +   A 
Sbjct: 1008 LTGQ-----SHEYGVHSVAFSPDGRYIVSGSD---DKTVRVWDSSTGQSVMDPLKGHYAW 1059

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-----APTWSPSGRS 403
             +   +SP G  I           I +          L +          +  +SP  ++
Sbjct: 1060 VYSVAFSPDGKYIVSGSLDKT---IRLWDAVTGHS--LGDPFQGHYAAVLSVVFSPDDKT 1114

Query: 404  L 404
            +
Sbjct: 1115 I 1115



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 106/345 (30%), Gaps = 60/345 (17%)

Query: 80   NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLV---------TGRVIKEGKDRLRVE--- 127
              I+  S  + I +  S    + W++L  Q ++            V+        V    
Sbjct: 727  KPIAYSSNGKHIISGSSDKTIKIWDALTGQCVMGPLEGHDDWITSVVCSPDGGHIVSGSK 786

Query: 128  ---FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ES 183
                R+W+    + ++               H+    +   + G  G            +
Sbjct: 787  DMTIRVWNTLTGQSVME----------PLKGHSQC--LMDPLIGHDGGVQCLAYSPDGMN 834

Query: 184  VVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +VSG    ++ V D   G +I  +      I     FSP+ + +  AT +      + L 
Sbjct: 835  IVSGSFDFTIRVWDALSGQSIMVIFRGSALIHKV-AFSPDGKHILCATGNH----IIRLW 889

Query: 243  DTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +          + N    + +  FS NGK  L        ++I    L+           
Sbjct: 890  NALTSHCTLSPLKNDEGSVNSVVFSPNGKHIL-----SGCLNIMG-PLKG--------HD 935

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDL 360
             +  S ++SPD   I   S       + V  +  G       +  +       +SP G  
Sbjct: 936  KMVTSVAFSPDGRYIASGSH---DCTVRVWDALTGQSAMDPLKGHDKGVISVAFSPDGRY 992

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            IA          + V      Q      +  + +  +SP GR ++
Sbjct: 993  IA---SGSSDMTVRVWNALTGQ----SHEYGVHSVAFSPDGRYIV 1030



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 56/169 (33%), Gaps = 22/169 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESD 321
            +SSNGK   IS   D+ + I+  D  +       L        S   SPD   IV  S 
Sbjct: 730 AYSSNGKHI-ISGSSDKTIKIW--DALTGQCVMGPLEGHDDWITSVVCSPDGGHIVSGSK 786

Query: 322 ----REGKEQL--YVMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               R         VM+      + +       +       +SP G  I    F    F 
Sbjct: 787 DMTIRVWNTLTGQSVMEPLKGHSQCLMDPLIGHDGGVQCLAYSPDGMNIVSGSFD---FT 843

Query: 373 IGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           I V      Q    +    + +    +SP G+ ++ +    G+   +L+
Sbjct: 844 IRVWDALSGQSIMVIFRGSALIHKVAFSPDGKHILCAT---GNHIIRLW 889


>gi|238765079|ref|ZP_04626014.1| hypothetical protein ykris0001_18920 [Yersinia kristensenii ATCC
           33638]
 gi|238696696|gb|EEP89478.1| hypothetical protein ykris0001_18920 [Yersinia kristensenii ATCC
           33638]
          Length = 427

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 64/159 (40%), Gaps = 20/159 (12%)

Query: 279 DEAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQL 328
           +             +  R+T T       +  S   +   SPD S I     D +G  QL
Sbjct: 274 EGTPTTLPAPPAGVSQRRITFTADKRFPGLATSPRHWLRTSPDGSAIACLMKDDQGVVQL 333

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++  NG + ++++  ++       W PQG  +AF   +    ++        + + L  
Sbjct: 334 WLVSPNGGEPRQLTFTEQGIQSAFSWHPQGHSLAFVCDN----SVMQCDSTTGRLQRLTT 389

Query: 389 DS----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            S       A  +SP G  + F R+ DG   ++L+++D+
Sbjct: 390 RSAIAPLADAVVFSPDGAKVAFMREIDG--LAQLFTVDV 426



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 48/130 (36%), Gaps = 11/130 (8%)

Query: 212 QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +   PR     SP+   +A    DD+ +++++L+        +     + +  A  +  
Sbjct: 302 GLATSPRHWLRTSPDGSAIACLMKDDQGVVQLWLVSPNGGEPRQLTFTEQGIQSAFSWHP 361

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI---NISASYSPDSSQIVFESDREG 324
            G              +   D  +   +RLT    I     +  +SPD +++ F  + +G
Sbjct: 362 QGHSLAFVCDNS----VMQCDSTTGRLQRLTTRSAIAPLADAVVFSPDGAKVAFMREIDG 417

Query: 325 KEQLYVMQSN 334
             QL+ +   
Sbjct: 418 LAQLFTVDVG 427



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 46/139 (33%), Gaps = 15/139 (10%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASY-----FDPVW---SPQGDLIA-FTKFSGEKFAI 373
           EG          G  Q+RI+   +  +         W   SP G  IA   K       +
Sbjct: 274 EGTPTTLPAPPAGVSQRRITFTADKRFPGLATSPRHWLRTSPDGSAIACLMKDDQGVVQL 333

Query: 374 GVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRN 427
            ++  +G + R L   E     A +W P G SL F           T  +L  +      
Sbjct: 334 WLVSPNGGEPRQLTFTEQGIQSAFSWHPQGHSLAFVCDNSVMQCDSTTGRLQRLTTRSAI 393

Query: 428 ETLINTPAYASDPQWVGFM 446
             L +   ++ D   V FM
Sbjct: 394 APLADAVVFSPDGAKVAFM 412



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 7/100 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++  +G   R LT +   I     + P    +A+   +      V   D+   R  +
Sbjct: 332 QLWLVSPNGGEPRQLTFTEQGIQSAFSWHPQGHSLAFVCDN-----SVMQCDSTTGRLQR 386

Query: 252 RIGNFR--SMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                    +  A  FS +G +     + D    +++VD+
Sbjct: 387 LTTRSAIAPLADAVVFSPDGAKVAFMREIDGLAQLFTVDV 426


>gi|145549358|ref|XP_001460358.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124428188|emb|CAK92961.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2493

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 102/298 (34%), Gaps = 27/298 (9%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQII------GKKFFSSPASWRKIAHTISDDIYQSI---- 166
                        RLWDVK  KQ        G  +  + +    I    S+D+Y  +    
Sbjct: 2192 TTLASGSQDKSIRLWDVKTGKQKAKLDGHSGYVYSVNFSDDGNILEYGSEDMYMDLWEFQ 2251

Query: 167  -TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
               +KG F+    ++ +  +    K           ++  +   + + + +     +  K
Sbjct: 2252 KGQQKGRFDCYQSYIYQINLYDDGKKLEYGSKDKQISLGDVKKGKQKKIIDVNLYNDGNK 2311

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            + Y + D      + L D +  +   ++      IL+  FS +G     S   D ++ ++
Sbjct: 2312 LEYGSDDK----CISLWDVKKRQQKAKLDGHEYGILSVHFSPDGTTLA-SGSGDNSIRLW 2366

Query: 286  SVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
              D+++   + +L        S ++SPD + +   S+      + +       QK     
Sbjct: 2367 --DVKTGQQKAKLDGHSSFINSVNFSPDGTTLASGSE---DNSIRLWDVKTGQQKAKLDG 2421

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPS 400
             E       +SP G  +A          I +      Q++  ++  +    +  +SP 
Sbjct: 2422 HEYGILSVNFSPDGTTLASGSGDNS---IRLWDVKTGQQKAKLDGHSNTVYSVNFSPD 2476



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 92/312 (29%), Gaps = 57/312 (18%)

Query: 158  ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            I +D+Y     +             ++ SG   NS+ + D      +         +   
Sbjct: 2126 IINDLYSFYGHQASVETVGFSSDGTTLASGSRDNSIRLWDAKTGKQKAKLDGHSDGILSI 2185

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV- 276
             FSP+   +A  + D      + L D +  +   ++      + +  FS +G        
Sbjct: 2186 NFSPDGTTLASGSQDK----SIRLWDVKTGKQKAKLDGHSGYVYSVNFSDDGNILEYGSE 2241

Query: 277  ------------QKDEAMDIYSV--------------------------DLQSNATERLT 298
                        Q+    D Y                            D++    +++ 
Sbjct: 2242 DMYMDLWEFQKGQQKGRFDCYQSYIYQINLYDDGKKLEYGSKDKQISLGDVKKGKQKKII 2301

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +    N       D +++ + SD    + + +       QK      E       +SP G
Sbjct: 2302 DVNLYN-------DGNKLEYGSD---DKCISLWDVKKRQQKAKLDGHEYGILSVHFSPDG 2351

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              +A +        +  +K    + +L    S + +  +SP G +L        D   +L
Sbjct: 2352 TTLA-SGSGDNSIRLWDVKTGQQKAKLDGHSSFINSVNFSPDGTTLA---SGSEDNSIRL 2407

Query: 419  YSIDLNGRNETL 430
            + +    +   L
Sbjct: 2408 WDVKTGQQKAKL 2419



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 101/348 (29%), Gaps = 70/348 (20%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        RLWD K  KQ                 H  SD I        G     
Sbjct: 2150 TTLASGSRDNSIRLWDAKTGKQKAKLD-----------GH--SDGILSINFSPDG----- 2191

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                  ++ SG    S+ + D      +         ++   FS +   + Y + D    
Sbjct: 2192 -----TTLASGSQDKSIRLWDVKTGKQKAKLDGHSGYVYSVNFSDDGNILEYGSEDM--- 2243

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----------SVQKDEAMDIYS 286
              + L + +  +   R   ++S I       +GK+              V+K +   I  
Sbjct: 2244 -YMDLWEFQKGQQKGRFDCYQSYIYQINLYDDGKKLEYGSKDKQISLGDVKKGKQKKIID 2302

Query: 287  VDL--QSNATE--------------------RLTNTLFINISASYSPDSSQIVFESDREG 324
            V+L    N  E                    +L    +  +S  +SPD + +   S   G
Sbjct: 2303 VNLYNDGNKLEYGSDDKCISLWDVKKRQQKAKLDGHEYGILSVHFSPDGTTLASGS---G 2359

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
               + +       QK       +      +SP G  +A          I +      Q++
Sbjct: 2360 DNSIRLWDVKTGQQKAKLDGHSSFINSVNFSPDGTTLASGSEDNS---IRLWDVKTGQQK 2416

Query: 385  LLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
              ++     + +  +SP G +L       GD   +L+ +    +   L
Sbjct: 2417 AKLDGHEYGILSVNFSPDGTTLA---SGSGDNSIRLWDVKTGQQKAKL 2461


>gi|320108407|ref|YP_004183997.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319926928|gb|ADV84003.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
          Length = 690

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 89/290 (30%), Gaps = 68/290 (23%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--------PRFSSNG 269
             SP+ + +A+    D ++  +       DR        +    A        P +S++ 
Sbjct: 42  ALSPDGKLLAWT--GDSNLHLIMTAALDQDRVLSPDTASKPGNTATSACKSSHPTWSADS 99

Query: 270 KRALISVQKD------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF----E 319
            +       D          ++     +N   +LT+         +SPD   I F     
Sbjct: 100 TQLAFLSDCDLHGAKSPQSQLWIFTPATNGVRQLTHLTGNLDEPQFSPDGKTIAFLFVSN 159

Query: 320 SDREGK------EQLYVMQSNGSDQKRISQDKEASYFDP------------VWSPQGDLI 361
           + R           + V+  +  + + +   + A+ + P             WSP    I
Sbjct: 160 ATRSAGATDAMQPAIGVIGQDNIEVQTVKTVEVATGYVPKNNLTDLHIYEFSWSPDSSRI 219

Query: 362 AFT---KFSGEKF---AIGVMKKDGS-----------QERLLVEDSNLQA---------P 395
            +T         +    +  +  D S           + ++LV+ + +           P
Sbjct: 220 VYTAAPSPGENNWWVARLYAVGIDASKPEFKAKESLLEPQMLVDPNTIPGPLHGLQITLP 279

Query: 396 TWSPSGRSLIFSR---KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +SP G+++ F        G  G  LY     G++ T   T    +   W
Sbjct: 280 RFSPDGKNIAFLGGLMSDFGSNGGDLYITSSEGKD-THPFTEGRKASIAW 328



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 84/262 (32%), Gaps = 60/262 (22%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRA 249
            V+  D A+    T +       P +S +  ++A+ +    +  +       + T     
Sbjct: 70  RVLSPDTASKPGNTATSACKSSHPTWSADSTQLAFLSDCDLHGAKSPQSQLWIFTPATNG 129

Query: 250 PKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEAMDIY------------------S 286
            +++ +    +  P+FS +GK         + +   A D                    +
Sbjct: 130 VRQLTHLTGNLDEPQFSPDGKTIAFLFVSNATRSAGATDAMQPAIGVIGQDNIEVQTVKT 189

Query: 287 VDLQSNATER--LTNTLFINISASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQ 338
           V++ +    +  LT+        S+SPDSS+IV+ +      +     +LY +  + S  
Sbjct: 190 VEVATGYVPKNNLTDLHIY--EFSWSPDSSRIVYTAAPSPGENNWWVARLYAVGIDASKP 247

Query: 339 K----------RISQDKEASYFD--------PVWSPQGDLIAF-----TKFSGEKFAIGV 375
           +          ++  D               P +SP G  IAF     + F      + +
Sbjct: 248 EFKAKESLLEPQMLVDPNTIPGPLHGLQITLPRFSPDGKNIAFLGGLMSDFGSNGGDLYI 307

Query: 376 MKKDGSQERLLVEDSNLQAPTW 397
              +G       E        +
Sbjct: 308 TSSEGKDTHPFTEGRKASIAWF 329



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 80/272 (29%), Gaps = 50/272 (18%)

Query: 218 RFSPNQQKVAYATYDDED-----ILRVYLMDTRIDRAP-----------------KRIGN 255
            +SP+  ++ Y            + R+Y +     +                      G 
Sbjct: 211 SWSPDSSRIVYTAAPSPGENNWWVARLYAVGIDASKPEFKAKESLLEPQMLVDPNTIPGP 270

Query: 256 FRSMILA-PRFSSNGKRALI-----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              + +  PRFS +GK         S       D+Y    +   T   T     +I+   
Sbjct: 271 LHGLQITLPRFSPDGKNIAFLGGLMSDFGSNGGDLYITSSEGKDTHPFTEGRKASIAWFQ 330

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG------DLIAF 363
              +  ++      GK  + ++ ++G      SQ+ + +                  +AF
Sbjct: 331 WVGADHVLISEHERGKVHVAILGTSGHQMPFTSQNFDGTLGSGASVLSLSVSPSTRNVAF 390

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--------SPSG----RSLIFSRKKD 411
              S EK A  V          +   ++   P+W        +  G      L++    D
Sbjct: 391 FASSFEK-APEVYFGSPGNLHQVTHLNDTLKPSWGKSESIEYTNDGFNLQGFLLYPAHYD 449

Query: 412 GDTGSKLYSI---DLNGRNETLINTPAYASDP 440
                 L +      +G N ++  T A+   P
Sbjct: 450 PAKKYGLITYVHGGPSGANASMWPTAAFGPAP 481


>gi|256397933|ref|YP_003119497.1| WD40 domain-containing protein beta Propeller [Catenulispora
           acidiphila DSM 44928]
 gi|256364159|gb|ACU77656.1| WD40 domain protein beta Propeller [Catenulispora acidiphila DSM
           44928]
          Length = 635

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 79/215 (36%), Gaps = 26/215 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++P+  +  +A  D     R       I   P + G  RS    P F +NG   + S  
Sbjct: 48  AWAPDGSRYVHANPDGSIATRNLPGGAEITVDPAKAGVARSN---PTFWNNGTAIVFSET 104

Query: 278 KDEAMDIYSVD---------LQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKE 326
            +    + S+          ++S+    L++ +      +   D +++VF+  +    ++
Sbjct: 105 VNGTSKLVSIPTYTPAGEPVVESDPLIFLSSKMPEGTETAPDSDGTKLVFQHHNTASNQD 164

Query: 327 QLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGV--------M 376
           ++YV  S G      I      +   P  SP G  IAF +        I           
Sbjct: 165 EIYVQDSYGRGSAGPILAAANGT--SPSISPDGKTIAFLRKDNAGHEQIWTVAWNGQSAQ 222

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              G+ ++L     +  +PT+SP G  + ++ +  
Sbjct: 223 PPAGTAKQLTTNAEDHLSPTFSPDGTRIAYAARTS 257



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 77/220 (35%), Gaps = 33/220 (15%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF----INI 305
           P   GN    I    ++ +G R  +    D +  I + +L   A   +T           
Sbjct: 34  PAGPGNSPLTIGKGAWAPDGSR-YVHANPDGS--IATRNLPGGAE--ITVDPAKAGVARS 88

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----------SQDKEASYFDPVWS 355
           + ++  + + IVF     G  +L  + +     + +          S+  E +   P   
Sbjct: 89  NPTFWNNGTAIVFSETVNGTSKLVSIPTYTPAGEPVVESDPLIFLSSKMPEGTETAPDS- 147

Query: 356 PQGDLIAFTKFS--GEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             G  + F   +    +  I V    G      ++  +N  +P+ SP G+++ F R KD 
Sbjct: 148 -DGTKLVFQHHNTASNQDEIYVQDSYGRGSAGPILAAANGTSPSISPDGKTIAFLR-KDN 205

Query: 413 DTGSKLYSIDLNGRN--------ETLINTPAYASDPQWVG 444
               +++++  NG++        + L         P +  
Sbjct: 206 AGHEQIWTVAWNGQSAQPPAGTAKQLTTNAEDHLSPTFSP 245



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 49/147 (33%), Gaps = 16/147 (10%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++++F   +  S   +  +      G+    L  +       P  SP+ + +A+   D+ 
Sbjct: 150 TKLVFQHHNTASNQDEIYVQDSYGRGSAGPILAAANG---TSPSISPDGKTIAFLRKDNA 206

Query: 235 DILRVYLMDTRID------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
              +++ +              K++       L+P FS +G R   + +         V+
Sbjct: 207 GHEQIWTVAWNGQSAQPPAGTAKQLTTNAEDHLSPTFSPDGTRIAYAARTSTTGSPSRVE 266

Query: 289 ----LQSNATERLTNTLFINISASYSP 311
                  +  ++         + SY P
Sbjct: 267 SVSAADGSGLKQ---ESATGGTPSYQP 290


>gi|281420434|ref|ZP_06251433.1| prolyl oligopeptidase family protein [Prevotella copri DSM 18205]
 gi|281405579|gb|EFB36259.1| prolyl oligopeptidase family protein [Prevotella copri DSM 18205]
          Length = 720

 Score = 77.0 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 82/235 (34%), Gaps = 64/235 (27%)

Query: 266 SSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S NGK+ +  V      +      ++ +D      + LT        A++     +I F 
Sbjct: 53  SPNGKQVVYQVGYYSVKENKGHQMLFIMDANGKNQKALTTDAKSETDAAWIQGGQKIAFI 112

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----------------- 362
             R+G  QL+ M  +G+ +K+++ DK        +SP G  +                  
Sbjct: 113 --RDG--QLWSMNPDGTGRKQLTNDKLGIQGF-RFSPDGKKVILIKELPYHGTIKENPSD 167

Query: 363 --------FTKFSGEKFAIGVMKK----------DGS---QERLLVED---------SNL 392
                    T  +   +   V             DG+    E +L ++           +
Sbjct: 168 LPLATGRLVTDMNYRHWDHYVESLLHPFVADVAEDGTINAGEDILKDEPFECPMAPFGGI 227

Query: 393 QAPTWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +   WSP  +++ ++ RKK+G      T S +Y  ++  R    +   A   +P+
Sbjct: 228 EQLAWSPDSKTIAYTCRKKEGVQYAISTDSDIYLYNIGTRETKNLCKEAGYVEPK 282



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/318 (15%), Positives = 100/318 (31%), Gaps = 87/318 (27%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA--------------------- 227
               L  M+ DG   + LT  +  I    RFSP+ +KV                      
Sbjct: 113 RDGQLWSMNPDGTGRKQLTNDKLGIQGF-RFSPDGKKVILIKELPYHGTIKENPSDLPLA 171

Query: 228 ---------YATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMI--LAP-------R 264
                    Y  +D             + +     A + I         +AP        
Sbjct: 172 TGRLVTDMNYRHWDHYVESLLHPFVADVAEDGTINAGEDILKDEPFECPMAPFGGIEQLA 231

Query: 265 FSSNGKRALISVQKDEA--------MDIYSVDLQSNATERL-------------T----- 298
           +S + K    + +K E          DIY  ++ +  T+ L             T     
Sbjct: 232 WSPDSKTIAYTCRKKEGVQYAISTDSDIYLYNIGTRETKNLCKEAGYVEPKIDATKSMKN 291

Query: 299 ----------NTLFINISASYSPDSSQIVFESD-REG----KEQLYVMQSNGSDQKRISQ 343
                     N    +++  +S D   I ++S  R+G    + +L V +     +  +S+
Sbjct: 292 QAVNAPENLKNNPGYDVNPQFSADGKYIAWQSMARDGYESDRNRLCVYELATGKKNYVSE 351

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             ++S    VW+     ++F         +      G  +++  E ++  + + + +G  
Sbjct: 352 KFDSSVEGFVWNKDNKSLSFIGVWHGTLNLYQANFKGEVKQITNEWADYGSISLANNGNK 411

Query: 404 LIFSRKKDGDTGSKLYSI 421
           L+ + K      + +Y +
Sbjct: 412 LL-ATKASMSHPTDIYIV 428



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 101/339 (29%), Gaps = 97/339 (28%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        L +MD +G N + LT        +  +    QK+A+    D  +  +  
Sbjct: 66  YSVKENKGHQMLFIMDANGKNQKALTTDAKS-ETDAAWIQGGQKIAF--IRDGQLWSMNP 122

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI----YSVDLQSNATERL 297
             T      K++ N +  I   RFS +GK+ ++  +      I      + L +      
Sbjct: 123 DGTG----RKQLTNDKLGIQGFRFSPDGKKVILIKELPYHGTIKENPSDLPLATGRLVTD 178

Query: 298 TNTLFIN----------------------------ISAS--------------YSPDSSQ 315
            N    +                                              +SPDS  
Sbjct: 179 MNYRHWDHYVESLLHPFVADVAEDGTINAGEDILKDEPFECPMAPFGGIEQLAWSPDSKT 238

Query: 316 IVFE-SDREGKE-------QLYVMQSNGSDQKRI-------------------------- 341
           I +    +EG +        +Y+      + K +                          
Sbjct: 239 IAYTCRKKEGVQYAISTDSDIYLYNIGTRETKNLCKEAGYVEPKIDATKSMKNQAVNAPE 298

Query: 342 -SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQ 393
             ++      +P +S  G  IA+   + + +      + V +    ++  + E  DS+++
Sbjct: 299 NLKNNPGYDVNPQFSADGKYIAWQSMARDGYESDRNRLCVYELATGKKNYVSEKFDSSVE 358

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              W+   +SL F     G     LY  +  G  + + N
Sbjct: 359 GFVWNKDNKSLSFIGVWHGT--LNLYQANFKGEVKQITN 395



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 74/214 (34%), Gaps = 19/214 (8%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATY----DDEDILRVYLMDTRIDRAPKRIGNFR 257
           N      +       P+FS + + +A+ +      + D  R+ + +    +       F 
Sbjct: 295 NAPENLKNNPGYDVNPQFSADGKYIAWQSMARDGYESDRNRLCVYELATGKKNYVSEKFD 354

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           S +    ++ + K           +++Y  + +    +++TN      S S + + ++++
Sbjct: 355 SSVEGFVWNKDNKSLSFIGVWHGTLNLYQANFK-GEVKQITNEWADYGSISLANNGNKLL 413

Query: 318 FE-SDREGKEQLYVM----QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +       +Y++     +  +  ++I+++ +                     G++  
Sbjct: 414 ATKASMSHPTDIYIVTPGKDAKSTKVEQITRENDHILNQLNLGKCEQR-WVKTTDGKQML 472

Query: 373 IGVM-----KKDGSQERLLVEDSNLQAPT---WS 398
           + +M       +     LL  +   Q+P    WS
Sbjct: 473 VWIMLPSNFDANKKYPTLLFCEGGPQSPVSQFWS 506



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 398 SPSGRSLIF----SRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQWV 443
           SP+G+ +++       K+      L+ +D NG+N+  + T A + +D  W+
Sbjct: 53  SPNGKQVVYQVGYYSVKENKGHQMLFIMDANGKNQKALTTDAKSETDAAWI 103


>gi|188577881|ref|YP_001914810.1| alanyl dipeptidyl peptidase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188522333|gb|ACD60278.1| alanyl dipeptidyl peptidase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 713

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 10/114 (8%)

Query: 260 ILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYS 310
           + +P  S +G   L       +     A  ++  +L++      +RLT   +   S ++S
Sbjct: 43  VSSPTLSPDGSVVLFAKRQAKTANGTSATSLWVRNLRTRDVSPPKRLTPEGWNVNSPAFS 102

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           PD   + F S + G +QLY     G   ++++        +   SP G  I F+
Sbjct: 103 PDGKTVYFLSSKTGSQQLYAQPMAGGTPQQLT-AFAVDVDNYKLSPDGKRIVFS 155



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 88/274 (32%), Gaps = 51/274 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   V +A    +         L V  + TR    PKR+      + +P FS
Sbjct: 43  VSSPTLSPDGSVVLFAKRQAKTANGTSATSLWVRNLRTRDVSPPKRLTPEGWNVNSPAFS 102

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y+  +     ++LT       +   SPD  +IVF +   G  
Sbjct: 103 PDGKTVYFLSSKTGSQQLYAQPMAGGTPQQLTAFAVDVDNYKLSPDGKRIVFSA---GVF 159

Query: 327 QLYVMQSNGSDQK----------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           Q        + +K           +  D+        W+       F        A  V+
Sbjct: 160 QDCGSDLGCTKKKLGELKNHKASGVVYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVV 219

Query: 377 KKDGSQERLLVED-----SNLQAPTWSPSGRSLIFS--------------RKKDG----- 412
                   L  +            TWSP G S++ S               K  G     
Sbjct: 220 GASAISATLAGDAPSKPFGGNDDYTWSPDGASVVASVRIPQSYGTEAGKNTKAGGKPTGN 279

Query: 413 ----DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                T   LY +D +G++  +  T   AS+P W
Sbjct: 280 DEPWQTNFDLYRLDASGKSAPVNLT---ASNPAW 310



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 102/331 (30%), Gaps = 66/331 (19%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R +    S  ++Q    + G    ++  +     SG++ + L V   D  N
Sbjct: 142 NYKLSPDGKRIV---FSAGVFQDCGSDLGCTKKKLGELKNHKASGVVYDQLFVRHWDTWN 198

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSM 259
                              + ++      +        ++         A          
Sbjct: 199 -------------------DGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGG 239

Query: 260 ILAPRFSSNGKRALISVQKDE-------------------------AMDIYSVDLQSNA- 293
                +S +G   + SV+  +                           D+Y +D    + 
Sbjct: 240 NDDYTWSPDGASVVASVRIPQSYGTEAGKNTKAGGKPTGNDEPWQTNFDLYRLDASGKSA 299

Query: 294 TERLT-NTLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQD 344
              LT +    +    +S D   +         FE+DR G   L  M       + I+  
Sbjct: 300 PVNLTASNPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFG---LMAMDVASGKTREIAPT 356

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S  + V S  G  +  +     +  +  +     +   LV + ++ APT +  G +L
Sbjct: 357 WDRSAGEIVLSEDGSSLYTSADDLGEHPLFKIAIASGEATRLVGEGSVHAPTLA--GNTL 414

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            F+R     +G +++  D  G+    I+  A
Sbjct: 415 AFTRS-SLKSGDQVFVSDTQGQGLRAISQSA 444



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/311 (14%), Positives = 86/311 (27%), Gaps = 67/311 (21%)

Query: 183 SVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +G    SL V +   RD +  + LTP    +   P FSP+ + V + +       + 
Sbjct: 63  KTANGTSATSLWVRNLRTRDVSPPKRLTPEGWNVN-SPAFSPDGKTVYFLSSKTGS--QQ 119

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL--QSNATERL 297
                     P+++  F   +   + S +GKR + S            DL         L
Sbjct: 120 LYAQPMAGGTPQQLTAFAVDVDNYKLSPDGKRIVFSA---GVFQDCGSDLGCTKKKLGEL 176

Query: 298 TNTLFINI---------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-- 346
            N     +           +++      +F ++             G+     +   +  
Sbjct: 177 KNHKASGVVYDQLFVRHWDTWNDGRRNTLFVAE---LPAAGAKAVVGASAISATLAGDAP 233

Query: 347 ----ASYFDPVWSPQGDLIAFTKFSG-------------------------EKFAIGVMK 377
                   D  WSP G  +  +                               F +  + 
Sbjct: 234 SKPFGGNDDYTWSPDGASVVASVRIPQSYGTEAGKNTKAGGKPTGNDEPWQTNFDLYRLD 293

Query: 378 KDG-SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLI 431
             G S    L     +    P +S  G++L +   K     +    L ++D+       I
Sbjct: 294 ASGKSAPVNLTASNPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVASGKTREI 353

Query: 432 NTPAYASDPQW 442
                   P W
Sbjct: 354 A-------PTW 357


>gi|307152433|ref|YP_003887817.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306982661|gb|ADN14542.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 289

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 94/250 (37%), Gaps = 24/250 (9%)

Query: 182 ESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E++VSG   +++ + D   G            ++    FS + + +   ++D      V 
Sbjct: 18  ETIVSGSHDHTVRLWDAKTGLPKGKPLTGHTDVVMSVAFSRDGKTIVSGSFDK----TVR 73

Query: 241 LMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RL 297
           L D +  +   K +    + +++  FS +G+  + S  +D+ + ++  + ++   +   L
Sbjct: 74  LWDVKTGKAKGKPLIGHTARVMSVAFSPDGQTIV-SASEDKTVRLW--NAKTGRPQGNPL 130

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVWS 355
                   S ++SPD   IV  S+    + + +  +     +   +            +S
Sbjct: 131 IGHTKRVNSVAFSPDGQTIVSASE---DKTIRLWNAKTRRPQGNSLILPNMFQVNSVAFS 187

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           P G +I      G    + +        +   L E + + +  +SP G+ ++       D
Sbjct: 188 PDGKIIVSGSSDGS---VQLWDAQTRVPKGKPLTEHTPIISVAFSPDGKRIVSGSY---D 241

Query: 414 TGSKLYSIDL 423
              +L+   +
Sbjct: 242 KTVRLWDASV 251



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 76/204 (37%), Gaps = 22/204 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FSP+ + +   ++D      V L D +      K +     ++++  FS +GK  + S 
Sbjct: 12  AFSPDGETIVSGSHDH----TVRLWDAKTGLPKGKPLTGHTDVVMSVAFSRDGKTIV-SG 66

Query: 277 QKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             D+ + ++  D+++     + L       +S ++SPD   IV  S+    + + +  + 
Sbjct: 67  SFDKTVRLW--DVKTGKAKGKPLIGHTARVMSVAFSPDGQTIVSASE---DKTVRLWNAK 121

Query: 335 GSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER----LLVED 389
               +               +SP G  I           I +      + +    +L   
Sbjct: 122 TGRPQGNPLIGHTKRVNSVAFSPDGQTIVSASEDKT---IRLWNAKTRRPQGNSLILPNM 178

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGD 413
             + +  +SP G+ +I S   DG 
Sbjct: 179 FQVNSVAFSPDGK-IIVSGSSDGS 201



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 68/170 (40%), Gaps = 16/170 (9%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPD 312
              + + +  FS +G+  + S   D  + ++  D ++     + LT    + +S ++S D
Sbjct: 3   GHTTQVNSVAFSPDGETIV-SGSHDHTVRLW--DAKTGLPKGKPLTGHTDVVMSVAFSRD 59

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              IV  S  +   +L+ +++  +  K +     A      +SP G  I           
Sbjct: 60  GKTIVSGSF-DKTVRLWDVKTGKAKGKPLI-GHTARVMSVAFSPDGQTIVSASEDKT--- 114

Query: 373 IGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           + +      + +   L+     + +  +SP G++++ + +   D   +L+
Sbjct: 115 VRLWNAKTGRPQGNPLIGHTKRVNSVAFSPDGQTIVSASE---DKTIRLW 161



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 72/214 (33%), Gaps = 40/214 (18%)

Query: 109 QVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
            V+++    ++G            RLWDVK  K   GK      A  R ++   S D  Q
Sbjct: 49  DVVMSVAFSRDGKTIVSGSFDKTVRLWDVKTGKA-KGKPLIGHTA--RVMSVAFSPD-GQ 104

Query: 165 SITGEKGDFNSRILFVSESVVSGI------IKNSLCVMDRDGA--------------NIR 204
           +I     D   R+         G        + +      DG               N +
Sbjct: 105 TIVSASEDKTVRLWNAKTGRPQGNPLIGHTKRVNSVAFSPDGQTIVSASEDKTIRLWNAK 164

Query: 205 YLTPSRDQILFEP-------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
              P  + ++           FSP+ + +   + D      V L D +      +     
Sbjct: 165 TRRPQGNSLILPNMFQVNSVAFSPDGKIIVSGSSDG----SVQLWDAQTRVPKGKPLTEH 220

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           + I++  FS +GKR + S   D+ + ++   ++S
Sbjct: 221 TPIISVAFSPDGKRIV-SGSYDKTVRLWDASVES 253



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 56/142 (39%), Gaps = 14/142 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD   IV  S  +   +L+  ++     K ++   +       +S  G  I    F 
Sbjct: 12  AFSPDGETIVSGSH-DHTVRLWDAKTGLPKGKPLTGHTDV-VMSVAFSRDGKTIVSGSFD 69

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                  V       + L+   + + +  +SP G++++ + +   D   +L++    GR 
Sbjct: 70  KTVRLWDVKTGKAKGKPLIGHTARVMSVAFSPDGQTIVSASE---DKTVRLWNAK-TGRP 125

Query: 428 E--------TLINTPAYASDPQ 441
           +          +N+ A++ D Q
Sbjct: 126 QGNPLIGHTKRVNSVAFSPDGQ 147


>gi|122879258|ref|YP_202072.6| alanyl dipeptidyl peptidase [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 706

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 47/114 (41%), Gaps = 10/114 (8%)

Query: 260 ILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYS 310
           + +P  S +G   L       +     A  ++  +L++      +RLT   +   S ++S
Sbjct: 36  VSSPTLSPDGSVVLFAKRQAKTANGTSATSLWVRNLRTRDVSPPKRLTPEGWNVNSPAFS 95

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           PD   + F S + G +QLY     G   ++++        +   SP G  I F+
Sbjct: 96  PDGKTVYFLSSKTGSQQLYAQPMAGGTPQQLT-AFAVDVDNYKLSPDGKRIVFS 148



 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 55/274 (20%), Positives = 88/274 (32%), Gaps = 51/274 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   V +A    +         L V  + TR    PKR+      + +P FS
Sbjct: 36  VSSPTLSPDGSVVLFAKRQAKTANGTSATSLWVRNLRTRDVSPPKRLTPEGWNVNSPAFS 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y+  +     ++LT       +   SPD  +IVF +   G  
Sbjct: 96  PDGKTVYFLSSKTGSQQLYAQPMAGGTPQQLTAFAVDVDNYKLSPDGKRIVFSA---GVF 152

Query: 327 QLYVMQSNGSDQK----------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           Q        + +K           +  D+        W+       F        A  V+
Sbjct: 153 QDCGSDLGCTKKKLGELKNHKASGVVYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVV 212

Query: 377 KKDGSQERLLVED-----SNLQAPTWSPSGRSLIFS--------------RKKDG----- 412
                   L  +            TWSP G S++ S               K  G     
Sbjct: 213 GASAISATLAGDAPSKPFGGNDDYTWSPDGASVVASVRIPQSYGTEAGKNTKAGGKPTGN 272

Query: 413 ----DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                T   LY +D +G++  +  T   AS+P W
Sbjct: 273 DEPWQTNFDLYRLDASGKSAPVNLT---ASNPAW 303



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 102/331 (30%), Gaps = 66/331 (19%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R +    S  ++Q    + G    ++  +     SG++ + L V   D  N
Sbjct: 135 NYKLSPDGKRIV---FSAGVFQDCGSDLGCTKKKLGELKNHKASGVVYDQLFVRHWDTWN 191

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSM 259
                              + ++      +        ++         A          
Sbjct: 192 -------------------DGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGG 232

Query: 260 ILAPRFSSNGKRALISVQKDE-------------------------AMDIYSVDLQSNA- 293
                +S +G   + SV+  +                           D+Y +D    + 
Sbjct: 233 NDDYTWSPDGASVVASVRIPQSYGTEAGKNTKAGGKPTGNDEPWQTNFDLYRLDASGKSA 292

Query: 294 TERLT-NTLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQD 344
              LT +    +    +S D   +         FE+DR G   L  M       + I+  
Sbjct: 293 PVNLTASNPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFG---LMAMDVPSGKTREIAPT 349

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S  + V S  G  +  +     +  +  +     +   LV + ++ APT +  G +L
Sbjct: 350 WDRSAGEIVLSEDGSSLYTSADDLGEHPLFKIAIASGEATRLVGEGSVHAPTLA--GNTL 407

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            F+R     +G +++  D  G+    I+  A
Sbjct: 408 AFTRS-SLKSGDQVFVSDTQGQGLRAISQSA 437



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 88/303 (29%), Gaps = 61/303 (20%)

Query: 183 SVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +G    SL V +   RD +  + LTP    +   P FSP+ + V + +       + 
Sbjct: 56  KTANGTSATSLWVRNLRTRDVSPPKRLTPEGWNVN-SPAFSPDGKTVYFLSSKTGS--QQ 112

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL--QSNATERL 297
                     P+++  F   +   + S +GKR + S            DL         L
Sbjct: 113 LYAQPMAGGTPQQLTAFAVDVDNYKLSPDGKRIVFSA---GVFQDCGSDLGCTKKKLGEL 169

Query: 298 TNTLFINI---------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-- 346
            N     +           +++      +F ++             G+     +   +  
Sbjct: 170 KNHKASGVVYDQLFVRHWDTWNDGRRNTLFVAE---LPAAGAKAVVGASAISATLAGDAP 226

Query: 347 ----ASYFDPVWSPQGDLIAFTKFSG-------------------------EKFAIGVMK 377
                   D  WSP G  +  +                               F +  + 
Sbjct: 227 SKPFGGNDDYTWSPDGASVVASVRIPQSYGTEAGKNTKAGGKPTGNDEPWQTNFDLYRLD 286

Query: 378 KDG-SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDL-NGRNETL 430
             G S    L     +    P +S  G++L +   K     +    L ++D+ +G+   +
Sbjct: 287 ASGKSAPVNLTASNPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVPSGKTREI 346

Query: 431 INT 433
             T
Sbjct: 347 APT 349


>gi|111220703|ref|YP_711497.1| WD-40 repeat-containing serine/threonin protein kinase [Frankia
           alni ACN14a]
 gi|111148235|emb|CAJ59905.2| putative serine/threonine protein kinase; G-protein beta WD-40
           repeat precursor [Frankia alni ACN14a]
          Length = 824

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 76/243 (31%), Gaps = 12/243 (4%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    + +  FSP+ + +A  +YD   IL   + D R       I      +L   
Sbjct: 529 STLTRHTSWVLDAAFSPDGRTLATVSYDRSAILW-DISDPRHPAELAVIHGHNGWVLDAA 587

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-DR 322
           FS +G+    S   + A      D +   A   L          ++SPD   +   S DR
Sbjct: 588 FSPDGRTLATSGYDNTARLWDVTDPRHPTALSVLDRHTSWVNEVAFSPDGHLLATASADR 647

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             +               I+   +  +    +SP G  +A   + G      +       
Sbjct: 648 TARLWDITDPRRPRPLAAITAHTDYVWTV-AFSPDGRRLATGAYDGTARLWDITNPSRPA 706

Query: 383 ERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                  ++  +    +SP GR+L        DT   L+ +   GR  ++          
Sbjct: 707 ATASFPADEKWVFDLAFSPDGRTLA---TAGWDTTVHLWDVSGTGRPASVGTING---HG 760

Query: 441 QWV 443
            W+
Sbjct: 761 DWI 763



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 80/223 (35%), Gaps = 13/223 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    +  + +  FSP+ + +A + YD+   L   + D R   A   +    S +    F
Sbjct: 575 VIHGHNGWVLDAAFSPDGRTLATSGYDNTARLW-DVTDPRHPTALSVLDRHTSWVNEVAF 633

Query: 266 SSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           S +G     +   D    ++ +    +      +T       + ++SPD  ++      +
Sbjct: 634 SPDGHLLA-TASADRTARLWDITDPRRPRPLAAITAHTDYVWTVAFSPDGRRLA-TGAYD 691

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           G  +L+ + +        S   +  + FD  +SP G  +A   +      +  +   G  
Sbjct: 692 GTARLWDITNPSRPAATASFPADEKWVFDLAFSPDGRTLATAGWD-TTVHLWDVSGTGRP 750

Query: 383 ERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +         +QA  W+P G  +  +     D   ++  ID
Sbjct: 751 ASVGTINGHGDWIQALAWTPDGSGIATASD---DYTVRISRID 790



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 72/222 (32%), Gaps = 11/222 (4%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A          R  L  +        +    +  L    S NG+    S   D+ + ++
Sbjct: 459 LAAYRISPVREARAALRTSFAAATASVLTGHTASALGVDISPNGRLLA-STGADDLVQLW 517

Query: 286 SVDLQSNATER--LTNTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRIS 342
            +  +++  +   LT      + A++SPD   +   S  +    L+ +       +  + 
Sbjct: 518 DISDRAHPVKLSTLTRHTSWVLDAAFSPDGRTLATVSY-DRSAILWDISDPRHPAELAVI 576

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK--DGSQERLLVEDSNLQAPTWSPS 400
                   D  +SP G  +A + +        V       +   L    S +    +SP 
Sbjct: 577 HGHNGWVLDAAFSPDGRTLATSGYDNTARLWDVTDPRHPTALSVLDRHTSWVNEVAFSPD 636

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           G  L  +     D  ++L+ I  + R    +      +D  W
Sbjct: 637 GHLLATAS---ADRTARLWDI-TDPRRPRPLAAITAHTDYVW 674



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 62/212 (29%), Gaps = 31/212 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDV D +            SW          + +      G     
Sbjct: 593 RTLATSGYDNTARLWDVTDPRHPTALSVLDRHTSW----------VNEVAFSPDGH---- 638

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDE 234
                 +  S      L  +  D    R L    +    ++   FSP+ +++A   YD  
Sbjct: 639 ----LLATASADRTARLWDIT-DPRRPRPLAAITAHTDYVWTVAFSPDGRRLATGAYDG- 692

Query: 235 DILRVYLMDTRIDRAPKRIGNFRS---MILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                 L D      P    +F +    +    FS +G+    +   D  + ++ V    
Sbjct: 693 ---TARLWDITNPSRPAATASFPADEKWVFDLAFSPDGRTLA-TAGWDTTVHLWDVSGTG 748

Query: 292 NATERLTNTLFINI--SASYSPDSSQIVFESD 321
                 T     +   + +++PD S I   SD
Sbjct: 749 RPASVGTINGHGDWIQALAWTPDGSGIATASD 780


>gi|108760007|ref|YP_632356.1| hypothetical protein MXAN_4181 [Myxococcus xanthus DK 1622]
 gi|108463887|gb|ABF89072.1| hypothetical protein MXAN_4181 [Myxococcus xanthus DK 1622]
          Length = 1138

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 49/360 (13%), Positives = 112/360 (31%), Gaps = 38/360 (10%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             +V     +     L  E R  D      I G  F         +A+   +     +  
Sbjct: 215 DSVVQATGGRLNPGYLSPEQRALDPFGGNYITGMHFVE------YLANRYGESKLWKLVD 268

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV-- 226
           E+G      L V+        ++   +      ++R     R++   +  + P+      
Sbjct: 269 EQGGSLVPPLAVTLRFKRVYGRDIGSLFAEYTQSLRENLQVRERPSAQRTWVPDAGYFSR 328

Query: 227 ----------AYATYDDEDILRVYLMDTRIDRAPKR-----------IGNFRSMILAPRF 265
                     A      E   R+ +++       +R           +    +++    F
Sbjct: 329 LASHAASRVTATVGVGRERYTRLTVLEPDGRVRFERPLVELLPGRRWVLGSPTLVSGMSF 388

Query: 266 SSNGKRALISV-----QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           S +G    + +     +      ++ VD ++    RL     + +  S +PD +  V+  
Sbjct: 389 SRDGAWLYLVMADLNTEGGYTAKLWKVDARTGDVVRL-WDDVMGMGGSITPDGTAYVYVR 447

Query: 321 DREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                  +  +      +K ++      S   P  +P G+ + F       + + + + D
Sbjct: 448 VDGDSANVVRLDLETDTRKALTDFGASTSVGPPAVAPDGERVVFPLSGDAGWDLVLREAD 507

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           G    L  +     +P W    R L+F R+ +G   + + ++        + + P    D
Sbjct: 508 GRLRWLTRDGRFNYSPRWMDDER-LVFLREHEGRLQAHVLTV-ATREVVRITDAPHLVMD 565


>gi|20090406|ref|NP_616481.1| hypothetical protein MA1548 [Methanosarcina acetivorans C2A]
 gi|19915416|gb|AAM04961.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 524

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 89/257 (34%), Gaps = 31/257 (12%)

Query: 193 LCVMDRDGANIR------YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV-----YL 241
           L   + DG+ I+      +++      +  P +S +    AY  +    + ++     Y+
Sbjct: 89  LYAANTDGSGIKRIAWAEFISSRGGITINPPLWSQSGDYFAYVEWVKGRMYKIKSVNLYV 148

Query: 242 MDTRIDRAPK-----RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           M   ++   K     ++    S +   ++S    +   +      + IY +D ++     
Sbjct: 149 MSKDLNLIQKVELDPKVTGLESDLANFKWSPIENK--FAALVPGEIVIYDLDEKNELNFS 206

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           ++          +SPD  +IVF  +    + +  +     +  +I   K    +   WS 
Sbjct: 207 ISGDDAEITDMEWSPDGKKIVFLKN---GQDIIALDIENGEFNQIYSAKYVGMYGEKWST 263

Query: 357 QGDLIAF------TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSR 408
               + F       K     + I V  +D  +   +      + +   W P    ++   
Sbjct: 264 DSKRLIFYEIKTSEKVDDVSYDIYVADEDLEKPVKITTFTSGSSRVIQWYPDSEKIL--V 321

Query: 409 KKDGDTGSKLYSIDLNG 425
           KK  D    LYS+ + G
Sbjct: 322 KKCSDDSCALYSLSITG 338



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 108/274 (39%), Gaps = 21/274 (7%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-----TPSRDQILFE 216
           I   +  + GD+ + + +V   +      N L VM +D   I+ +         +  L  
Sbjct: 116 INPPLWSQSGDYFAYVEWVKGRMYKIKSVN-LYVMSKDLNLIQKVELDPKVTGLESDLAN 174

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            ++SP + K A         + +Y +D   +     I    + I    +S +GK+ +   
Sbjct: 175 FKWSPIENKFA---ALVPGEIVIYDLD-EKNELNFSISGDDAEITDMEWSPDGKKIVF-- 228

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF----ESDR--EGKEQLY 329
                 DI ++D+++    ++ +  ++ +    +S DS +++F     S++  +    +Y
Sbjct: 229 -LKNGQDIIALDIENGEFNQIYSAKYVGMYGEKWSTDSKRLIFYEIKTSEKVDDVSYDIY 287

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +     +I+     S     W P  + I   K S +  A+  +   G  ++L+ +D
Sbjct: 288 VADEDLEKPVKITTFTSGSSRVIQWYPDSEKILVKKCSDDSCALYSLSITGKMKKLIKKD 347

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +     +P+G     S   +  T   + + DL
Sbjct: 348 KIIDGMV-APNGYISATSLNPNSTTPPYIRTYDL 380



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 68/207 (32%), Gaps = 41/207 (19%)

Query: 265 FSSNGKRALISVQKDEAMD-----------IYSVDLQSNATERLTNTLFINIS------- 306
           +S +G   LI+V  +               +Y+ +   +  +R+    FI+         
Sbjct: 59  WSPDGSHMLINVVVNVYPKGKPDLYGCVGALYAANTDGSGIKRIAWAEFISSRGGITINP 118

Query: 307 ASYSPDSSQIVFESDREGKE------QLYVMQSNGSDQKRISQDK-----EASYFDPVWS 355
             +S       +    +G+        LYVM  + +  +++  D      E+   +  WS
Sbjct: 119 PLWSQSGDYFAYVEWVKGRMYKIKSVNLYVMSKDLNLIQKVELDPKVTGLESDLANFKWS 178

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDG 412
           P  +   F      +  I     D   E       +    T   WSP G+ ++F +    
Sbjct: 179 PIENK--FAALVPGEIVIY--DLDEKNELNFSISGDDAEITDMEWSPDGKKIVFLKN--- 231

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASD 439
             G  + ++D+       I +  Y   
Sbjct: 232 --GQDIIALDIENGEFNQIYSAKYVGM 256


>gi|312198151|ref|YP_004018212.1| pentapeptide repeat protein [Frankia sp. EuI1c]
 gi|311229487|gb|ADP82342.1| pentapeptide repeat protein [Frankia sp. EuI1c]
          Length = 1573

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 73/222 (32%), Gaps = 23/222 (10%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             F+P+ + +A       D   + L DT   R  ++  +    + A  FS NG    ++  
Sbjct: 1040 AFTPDGRILA----GAHDRAAIQLWDTATGRQVRQFVDLPGSVDAMTFSPNGNVLAVAGT 1095

Query: 278  KDEAMDIYSVDLQSNATERLTNTL----FINISASYSPDSSQIVFES-DREGKEQLYVMQ 332
                +              +T           + ++SPD   +   S DR     + +  
Sbjct: 1096 NTVGLWRV---ADGRRIRTVTVGRLLGAGTVNAVAFSPDGGVLAAVSNDRS----VRLWD 1148

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN- 391
            S    + R             ++P G  +A    +G    I      G +   L    + 
Sbjct: 1149 SGTGRRLRRLTGHTNRVGAAAFTPDGGTLATGDVNGTT--ILWNPATGRKIGQLTGPGSV 1206

Query: 392  LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            ++A  ++P G +L       GD   +L+     GR    ++ 
Sbjct: 1207 VKAVAFAPDGTALA---TAGGDRMIRLWDT-ATGRQIRQLSG 1244



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 100/318 (31%), Gaps = 41/318 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH----------------- 156
            GR++    DR     +LWD    +Q+  ++F   P S   +                   
Sbjct: 1045 GRILAGAHDR--AAIQLWDTATGRQV--RQFVDLPGSVDAMTFSPNGNVLAVAGTNTVGL 1100

Query: 157  -TISD-DIYQSITGEKGDFNSRILFVSESVVSG-----IIKNSLCVMDRDGANIRYLTPS 209
              ++D    +++T  +      +  V+ S   G         S+ + D            
Sbjct: 1101 WRVADGRRIRTVTVGRLLGAGTVNAVAFSPDGGVLAAVSNDRSVRLWDSGTGRRLRRLTG 1160

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
                +    F+P+   +A    +        L +    R   ++    S++ A  F+ +G
Sbjct: 1161 HTNRVGAAAFTPDGGTLATGDVNG----TTILWNPATGRKIGQLTGPGSVVKAVAFAPDG 1216

Query: 270  KRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                          I   D  +     +L+  L    + ++ PD + +V   D +G   L
Sbjct: 1217 TALA---TAGGDRMIRLWDTATGRQIRQLSGRLGPVTALAFGPDGTTLV-SGDDDGAVIL 1272

Query: 329  YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +   +    + R              +P G  IA  K +  +  +      G    +   
Sbjct: 1273 W--NTATGRRIRDFDGGVGWVVSVAVAPDGATIA-AKTNLGQVDLWNAATGGLIRSIPFT 1329

Query: 389  DSNLQAP-TWSPSGRSLI 405
            D+    P  ++  GR ++
Sbjct: 1330 DAGAPDPLVFTSDGRFVL 1347



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 51/368 (13%), Positives = 120/368 (32%), Gaps = 68/368 (18%)

Query: 88   KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
              ++T P S+ +   +   G        +   G DR+    RLWD    +QI        
Sbjct: 1197 IGQLTGPGSVVKAVAFAPDGT------ALATAGGDRM---IRLWDTATGRQI-------- 1239

Query: 148  PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
                R+++  +      +   +             ++VSG    ++ + +          
Sbjct: 1240 ----RQLSGRLGPVTALAFGPDG-----------TTLVSGDDDGAVILWNTATGRRIRDF 1284

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFS 266
                  +     +P+   +A       ++ +V L +       + I    +    P  F+
Sbjct: 1285 DGGVGWVVSVAVAPDGATIA----AKTNLGQVDLWNAATGGLIRSIPFTDAGAPDPLVFT 1340

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES------ 320
            S+G+  L       + D+ + D+ +     L       +         ++ F S      
Sbjct: 1341 SDGRFVL-----QGSRDLQAADVATGTRANLLAESTGEV--------RKVAFASRGDIFA 1387

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              +  + +++  +  + ++R    K  +      SP GD +A          I +     
Sbjct: 1388 TADKDDVVWLWSATTAKRRRRLAGKAGAVNMMALSPDGDTLAVA---DGSSGIQLWHTAT 1444

Query: 381  SQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             +   +L      +++  +SP G ++  +  +DG     L+ +       T + T A  +
Sbjct: 1445 GEQAHQLAHPTGTVESVAFSPDGGTVA-TGSRDGTAI--LWDVGSG----TRVATLAGLA 1497

Query: 439  DPQWVGFM 446
            +  W   +
Sbjct: 1498 NGDWAVLL 1505



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 60/197 (30%), Gaps = 23/197 (11%)

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            +  S + A  +S +G    I    D    I + DL+     ++          +++PD S
Sbjct: 905  SQWSRVEALEWSPDGTTLAIDRATD--TVIATADLR---PVQVMAG-----HPAFTPDGS 954

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-------S 367
             +  E    G   +    + G +Q R              SP   ++A   +        
Sbjct: 955  LLAVE---FGAGVIRRWDARGGEQVRKLAGYSGLLSKWALSPDRAILATVTYPRNASWPR 1011

Query: 368  GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             + +   +      ++          A  ++P GR L  +  +      +L+      + 
Sbjct: 1012 DQDYTFRLWNTVTGEQTHESTGVRFAAIAFTPDGRILAGAHDR---AAIQLWDTATGRQV 1068

Query: 428  ETLINTPAYASDPQWVG 444
               ++ P       +  
Sbjct: 1069 RQFVDLPGSVDAMTFSP 1085



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 37/123 (30%), Gaps = 7/123 (5%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            + +     A  R     +   +     SP+   +A A         + L  T       +
Sbjct: 1395 VWLWSATTAKRRRRLAGKAGAVNMMALSPDGDTLAVADGSSG----IQLWHTATGEQAHQ 1450

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            + +    + +  FS +G     +  +D    ++  D+ S         L     A   PD
Sbjct: 1451 LAHPTGTVESVAFSPDGGTVA-TGSRDGTAILW--DVGSGTRVATLAGLANGDWAVLLPD 1507

Query: 313  SSQ 315
             S 
Sbjct: 1508 GSY 1510


>gi|170077384|ref|YP_001734022.1| WD-40-like beta propeller repeat-containing protein [Synechococcus
           sp. PCC 7002]
 gi|169885053|gb|ACA98766.1| WD40-like Beta Propeller Repeat Protein [Synechococcus sp. PCC
           7002]
          Length = 178

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 41/126 (32%), Gaps = 3/126 (2%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYSP 311
           N R     P  S +G+       +    ++   DL         +L     I  S S S 
Sbjct: 34  NSRFHDEQPALSGDGRWLAFISNRHGTSELLFYDLNQKQFVELPKLNQKNAIYESPSLSR 93

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
               +V+ S   GK  + +          ++Q       +P  SP G  + F      ++
Sbjct: 94  TGRYLVYLSSPLGKPDIILYDRATQQSDILTQGYRHWVRNPQISPDGRYVVFESARRGQW 153

Query: 372 AIGVMK 377
            I V+ 
Sbjct: 154 DIEVLD 159



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 45/124 (36%), Gaps = 4/124 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           N+ F +   + S D   + F S+R G  +L     N      +     K A Y  P  S 
Sbjct: 34  NSRFHDEQPALSGDGRWLAFISNRHGTSELLFYDLNQKQFVELPKLNQKNAIYESPSLSR 93

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDT 414
            G  + +      K  I +  +   Q  +L +        P  SP GR ++F   + G  
Sbjct: 94  TGRYLVYLSSPLGKPDIILYDRATQQSDILTQGYRHWVRNPQISPDGRYVVFESARRGQW 153

Query: 415 GSKL 418
             ++
Sbjct: 154 DIEV 157



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 2/119 (1%)

Query: 216 EPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +P  S + + +A+ +       L  Y ++ +      ++    ++  +P  S  G+  + 
Sbjct: 41  QPALSGDGRWLAFISNRHGTSELLFYDLNQKQFVELPKLNQKNAIYESPSLSRTGRYLVY 100

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                   DI   D  +  ++ LT        +   SPD   +VFES R G+  + V+ 
Sbjct: 101 LSSPLGKPDIILYDRATQQSDILTQGYRHWVRNPQISPDGRYVVFESARRGQWDIEVLD 159



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 1/82 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
              ++ I   P  S   + + Y +        + L D    ++      +R  +  P+ S
Sbjct: 79  LNQKNAIYESPSLSRTGRYLVYLSSPLGKP-DIILYDRATQQSDILTQGYRHWVRNPQIS 137

Query: 267 SNGKRALISVQKDEAMDIYSVD 288
            +G+  +    +    DI  +D
Sbjct: 138 PDGRYVVFESARRGQWDIEVLD 159



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 31/89 (34%), Gaps = 4/89 (4%)

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSN 391
           +    +S +       P  S  G  +AF         +     +  Q   L     +++ 
Sbjct: 26  TPLTPVSLNSRFHDEQPALSGDGRWLAFISNRHGTSELLFYDLNQKQFVELPKLNQKNAI 85

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            ++P+ S +GR L++     G     LY 
Sbjct: 86  YESPSLSRTGRYLVYLSSPLGKPDIILYD 114


>gi|20089377|ref|NP_615452.1| cell surface protein [Methanosarcina acetivorans C2A]
 gi|19914272|gb|AAM03932.1| cell surface protein [Methanosarcina acetivorans C2A]
          Length = 923

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 82/200 (41%), Gaps = 17/200 (8%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y+ +    +  K   N  S   +  +   G R +    +    DIY  D+ +    ++TN
Sbjct: 13  YMYNLSTSKEIKITTNGSSKANSAIY---GNRVVWIDYRTGNSDIYMYDISTCKETQITN 69

Query: 300 TLFINISASYSPD--SSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            +    + +  P    ++IV++     G   +Y+     + + +I++     Y+   W P
Sbjct: 70  NVSEKANPTI-PTIYGNRIVWQEFGTYGNSNIYMYDLFNNTETQITK-----YYSNAWEP 123

Query: 357 Q--GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGD 413
               D I + ++   K  I +     S E ++  +++ +A PT    G  +++   ++G 
Sbjct: 124 SIFEDRIVWREYRSGKHEIYLYNISTSNETIITSNASEKANPTI--YGDRIVWEDMRNGF 181

Query: 414 TGSKLYSIDLNGRNETLINT 433
               +Y  +L+   ET + T
Sbjct: 182 ENWDIYMYNLSTFTETQMTT 201



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 82/236 (34%), Gaps = 30/236 (12%)

Query: 218 RFSPN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            + P+  + ++ +  Y       +YL +         I +  S    P     G R +  
Sbjct: 120 AWEPSIFEDRIVWREYRSGK-HEIYLYNISTSNET-IITSNASEKANPTIY--GDRIVWE 175

Query: 276 VQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             ++     DIY  +L +    ++T       S     D   IV+E  R G   +Y    
Sbjct: 176 DMRNGFENWDIYMYNLSTFTETQMTTDESNQYSPIIYDD--IIVWEDWRNGCRDIYRYNL 233

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKK------------- 378
           +     +++ D    Y   ++   GD +A++       KF I                  
Sbjct: 234 SAFTVAQVTTDGSDHYNPAIY---GDWLAWSDNRNGVSKFDIYACNLIDAEVIKTINSQV 290

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              + ++    S+ + P     G  +++   ++G + S +Y  +++   ET I T 
Sbjct: 291 TLVETQITTNPSSQEVPAI--YGDIIVWQDWRNGYSNSDIYMYNVSSDKETQITTN 344



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 76/222 (34%), Gaps = 22/222 (9%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-- 280
              + +  + +        M         +I    S    P    +    +    ++   
Sbjct: 311 GDIIVWQDWRNGYSNSDIYMYNVSSDKETQITTNESKQCKPVIYKD--IIVWEDWRNGYS 368

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-----LYVMQSNG 335
             DIY  +L ++   ++TN        +       IV+   R    +     +YV   + 
Sbjct: 369 NPDIYMYNLSTHTETQITNNDSYQSDPAIY--GDIIVWMDYRNFNPRGLVSEIYVYNLST 426

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQA 394
             + +I+ D+    F  ++   GD+I + +F +     + +      ++  +  D     
Sbjct: 427 CKETQITSDELEQSFPVIY---GDIITWQEFGAYGDSNVYMYDLSTYRKTKITTDGLNH- 482

Query: 395 PTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +SP+     +++   ++      +Y+I  +   +TLI T 
Sbjct: 483 --FSPAIWEDRVVWQGSRNNYWRILMYNISTS--KKTLITTN 520



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 52/143 (36%), Gaps = 16/143 (11%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPN--QQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           V   D +  R    + D +     FSP   + +V +      +  R+ + +    +    
Sbjct: 462 VYMYDLSTYRKTKITTDGLNH---FSPAIWEDRVVW-QGSRNNYWRILMYNISTSKKT-L 516

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEA-----MDIYSVDLQSNATERLTNTLFINISA 307
           I   +S    P  S  G   + +  ++        DIY  +L  +   ++T       + 
Sbjct: 517 ITTNKSTQEFP--SIYGNTIVWTDDRNGNGLPGNSDIYIYNLSIDMETQVTTDKSDQKNP 574

Query: 308 SYSPDSSQIVFESDREGKEQLYV 330
           +     ++IV+E  R G   +Y+
Sbjct: 575 AIY--GNKIVWEDWRNGNPDIYL 595


>gi|67903036|ref|XP_681774.1| hypothetical protein AN8505.2 [Aspergillus nidulans FGSC A4]
 gi|40747693|gb|EAA66849.1| hypothetical protein AN8505.2 [Aspergillus nidulans FGSC A4]
          Length = 859

 Score = 77.0 bits (188), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 60/183 (32%), Gaps = 11/183 (6%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             V        D   V L D       + +      +L+  FS +G+    S   D+ + 
Sbjct: 644 NSVWAVLASGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLA-SGSFDKTVR 702

Query: 284 IYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++  D  + + ++ L        S ++SPD   +   S     + + +        ++  
Sbjct: 703 LW--DPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSF---DKTVRLWDPATGSLQQTL 757

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSG 401
           +    +     +SP G L+A   F      + +        +  L+    +    +S  G
Sbjct: 758 RGHSDTVRSVAFSPDGRLLASGSFDKT---VRLWDPATGTLQQTLIIKGTVTELQFSQDG 814

Query: 402 RSL 404
             +
Sbjct: 815 SYI 817



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 66/177 (37%), Gaps = 12/177 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D    +++         +    FSP+ + +A  ++D      V L D  
Sbjct: 652 SGSDDETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDK----TVRLWDPA 707

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                + +    + + +  FS +G+    S   D+ + ++  D  + + ++ L       
Sbjct: 708 TGSLQQTLRGHSNWVRSVAFSPDGRLLA-SGSFDKTVRLW--DPATGSLQQTLRGHSDTV 764

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            S ++SPD   +   S     + + +        ++ +   + +  +  +S  G  I
Sbjct: 765 RSVAFSPDGRLLASGSF---DKTVRLWDPATGTLQQ-TLIIKGTVTELQFSQDGSYI 817



 Score = 65.8 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 58/171 (33%), Gaps = 15/171 (8%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L S   DE + ++  D  + + ++ L       +S ++SPD   +   S     + + +
Sbjct: 649 VLASGSDDETVRLW--DPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSF---DKTVRL 703

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                   ++  +          +SP G L+A   F      + +        +  +   
Sbjct: 704 WDPATGSLQQTLRGHSNWVRSVAFSPDGRLLASGSFDKT---VRLWDPATGSLQQTLRGH 760

Query: 391 NL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +   ++  +SP GR L        D   +L+     G  +  +      ++
Sbjct: 761 SDTVRSVAFSPDGRLLA---SGSFDKTVRLWD-PATGTLQQTLIIKGTVTE 807



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 37/132 (28%), Gaps = 9/132 (6%)

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             V  S  +  E + +        ++  +          +SP G L+A   F      + 
Sbjct: 647 WAVLASGSD-DETVRLWDPATGSLQQTLEGHSGWVLSVAFSPDGRLLASGSFDKT---VR 702

Query: 375 VMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +        +  +   +    +  +SP GR L        D   +L+        +TL  
Sbjct: 703 LWDPATGSLQQTLRGHSNWVRSVAFSPDGRLLA---SGSFDKTVRLWDPATGSLQQTLRG 759

Query: 433 TPAYASDPQWVG 444
                    +  
Sbjct: 760 HSDTVRSVAFSP 771


>gi|291570924|dbj|BAI93196.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 1728

 Score = 77.0 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 50/330 (15%), Positives = 113/330 (34%), Gaps = 49/330 (14%)

Query: 129  RLWDVK---DRKQIIGKKFFSSPASWRKIAHTI------SDDIYQSITGEKGDFNSRILF 179
            R+ DV    D + +      ++   W      +      SD +        G++ +   +
Sbjct: 1379 RVLDVTFSPDGQILASASQDTTVKLWSSSGKLLQTLSGHSDRVSSVSFSPNGEWLATASY 1438

Query: 180  ----------VSESVVSGIIKNSLCVMDRDG----------ANIRYLTPSRDQILFEPRF 219
                       S+S         L V   +G           +           +    +
Sbjct: 1439 DHTVKIWKRLNSQSNWYDNWPMKLRVSKFNGIGVIPKSLFVPSPVATLVGHTDSVMTVTY 1498

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+ Q +   + D    ++++  D    +  + I   +  +    FS +  R ++S   D
Sbjct: 1499 SPDGQYILSGSKD--GTIKIWTAD---GQFLRTITGHQEWVNQVSFSPD-SRTVVSASDD 1552

Query: 280  EAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              + ++  D  +    RL          +  ++SP+   I           + +   +G 
Sbjct: 1553 GTLILWKWDPANTMLSRLKTIQAHESYVLGVNFSPNGKVIA---SAGYDNTVKLWTQDGV 1609

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSN-LQA 394
                + +    S    V+SP G L+A   +      + +    DG+  + L+  S+ + +
Sbjct: 1610 LLNTLLKGTSDSVTRVVFSPDGSLLASASYDS---HVRIWSAKDGTLLKTLMGHSDSVMS 1666

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +SP GR+L  + +   D    ++++DL+
Sbjct: 1667 LGFSPDGRTLASASR---DHSVIMWNLDLD 1693



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 89/225 (39%), Gaps = 18/225 (8%)

Query: 190  KNSLCVMDRDGANIRYLTPS--RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
            +  +   ++ G  +  ++ +  RD +++   FSPN Q +A  T   +  ++++   TR  
Sbjct: 1231 QGDVQFFNQQGRRLMSISHTKKRDSVIYSVNFSPNGQFIA--TSGTDGTVKLW---TRQG 1285

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
               + +    +++    FS++G+    +   D+ + ++S   +    +            
Sbjct: 1286 ELLRTLQVDENIVFCVSFSADGRSLA-TAGYDKTVKVWS--WEGELLKTFRGHGDKVTRV 1342

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +SPD   +   S  +   +L+ +    S+ +   +       D  +SP G ++A     
Sbjct: 1343 RFSPDGRTLA-SSSYDKTVKLWNLH---SNPRATLKAHNDRVLDVTFSPDGQILASASQD 1398

Query: 368  GEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
                 + +    G   + L   S+ + + ++SP+G  L  +    
Sbjct: 1399 TT---VKLWSSSGKLLQTLSGHSDRVSSVSFSPNGEWLATASYDH 1440



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 47/292 (16%), Positives = 100/292 (34%), Gaps = 48/292 (16%)

Query: 165  SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQ 223
                  GD  +R+ F  +            V   +  +N R    + +  + +  FSP+ 
Sbjct: 1330 KTFRGHGDKVTRVRFSPDGRTLASSSYDKTVKLWNLHSNPRATLKAHNDRVLDVTFSPDG 1389

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            Q +A A+ D      V L  +   +  + +      + +  FS NG+    +   D  + 
Sbjct: 1390 QILASASQDT----TVKLWSS-SGKLLQTLSGHSDRVSSVSFSPNGEWLA-TASYDHTVK 1443

Query: 284  IY-SVDLQSN------ATERLTNTLFINISA----------------------SYSPDSS 314
            I+  ++ QSN         R++    I +                        +YSPD  
Sbjct: 1444 IWKRLNSQSNWYDNWPMKLRVSKFNGIGVIPKSLFVPSPVATLVGHTDSVMTVTYSPDGQ 1503

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             I+  S ++G  +++   ++G   + I+  +E       +SP    +  +        + 
Sbjct: 1504 YILSGS-KDGTIKIWT--ADGQFLRTITGHQEW-VNQVSFSPDSRTVV-SASDDGTLILW 1558

Query: 375  VMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSID 422
                  +    L      ++      +SP+G+ +  +     D   KL++ D
Sbjct: 1559 KWDPANTMLSRLKTIQAHESYVLGVNFSPNGKVIASAGY---DNTVKLWTQD 1607



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 90/227 (39%), Gaps = 26/227 (11%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G + +        I+++  +SP+   +A A+ D  + +R++   T   +A   +      
Sbjct: 1076 GIHEQNRLEGHADIVWDVVYSPSGDILASASTD--NTIRLW---TPEGKAIATLTGHNHN 1130

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + +  FS  G+  + S   D  + ++S D      + L        +  +SPDS  I   
Sbjct: 1131 VTSLDFSHCGQMLV-SASDDHTVKLWSRD--GKLLQTLIGHTDKVKAVRFSPDSQMIASA 1187

Query: 320  -SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI----- 373
             SDR     + +    G   + I   +  +     +SP G+++A     G+         
Sbjct: 1188 GSDRT----IILWNLQGEIIRTIRF-RHTALTWINFSPDGEILAAAANQGDVQFFNQQGR 1242

Query: 374  GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +M    +++R    DS + +  +SP+G+ +        D   KL++
Sbjct: 1243 RLMSISHTKKR----DSVIYSVNFSPNGQFIA---TSGTDGTVKLWT 1282


>gi|86605304|ref|YP_474067.1| WD-40-like beta propeller repeat-containing protein [Synechococcus
           sp. JA-3-3Ab]
 gi|86553846|gb|ABC98804.1| WD40-like beta propeller repeat protein [Synechococcus sp.
           JA-3-3Ab]
          Length = 194

 Score = 77.0 bits (188), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 9/138 (6%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN------ISASYSPDSSQI 316
           P FS +G+  + S  +  + DI+  D      +RL +   +N       S   S D   I
Sbjct: 56  PSFSGDGRYLVFSSARGGSQDIFLYD---TVEQRLVDLPGLNSSDVAATSPDISADGRYI 112

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           V+ S+  GK ++++        + IS        +P  S  G  IAF      ++ I + 
Sbjct: 113 VYVSNALGKSEIFLYDRQTRRVENISSRVPGDVRNPTISGDGRFIAFESNGRGQWNIEIF 172

Query: 377 KKDGSQERLLVEDSNLQA 394
            +  +        S+  A
Sbjct: 173 DRGPAAATRPSAPSSSNA 190



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 59/150 (39%), Gaps = 12/150 (8%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDPV 353
           N++F +   S+S D   +VF S R G + +++     + ++R+         + +   P 
Sbjct: 48  NSIFPDGEPSFSGDGRYLVFSSARGGSQDIFLYD---TVEQRLVDLPGLNSSDVAATSPD 104

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKD 411
            S  G  I +   +  K  I +  +   +   +      +++ PT S  GR + F     
Sbjct: 105 ISADGRYIVYVSNALGKSEIFLYDRQTRRVENISSRVPGDVRNPTISGDGRFIAFESNGR 164

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           G    +++  D      T  + P+ ++   
Sbjct: 165 GQWNIEIF--DRGPAAATRPSAPSSSNAGS 192



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 55/139 (39%), Gaps = 4/139 (2%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRAL 273
           EP FS + + + +++        ++L DT   R     G   S + A  P  S++G+  +
Sbjct: 55  EPSFSGDGRYLVFSSAR-GGSQDIFLYDTVEQRLVDLPGLNSSDVAATSPDISADGRYIV 113

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                    +I+  D Q+   E +++       + + S D   I FES+  G+  + +  
Sbjct: 114 YVSNALGKSEIFLYDRQTRRVENISSRVPGDVRNPTISGDGRFIAFESNGRGQWNIEIFD 173

Query: 333 SNGSDQKRISQDKEASYFD 351
              +   R S    ++   
Sbjct: 174 RGPAAATRPSAPSSSNAGS 192



 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 28/100 (28%), Gaps = 1/100 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S D     P  S + + + Y +        ++L D +  R           +  P  S
Sbjct: 93  LNSSDVAATSPDISADGRYIVYVSNALGKS-EIFLYDRQTRRVENISSRVPGDVRNPTIS 151

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +G+            +I   D    A  R +     N  
Sbjct: 152 GDGRFIAFESNGRGQWNIEIFDRGPAAATRPSAPSSSNAG 191


>gi|172039430|ref|YP_001805931.1| WD40-like beta-propeller protein [Cyanothece sp. ATCC 51142]
 gi|171700884|gb|ACB53865.1| WD40-like beta-propeller protein [Cyanothece sp. ATCC 51142]
          Length = 180

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 3/141 (2%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                 P    N +S    P +S +G+    + ++    DIY  DLQ      L N    
Sbjct: 39  LTTPEIPTGGLNSKSPEEYPTYSGDGRFLAFASERQGHRDIYLFDLQQKRLVSLPNLNRR 98

Query: 304 NIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           + S    + S D   +V+ S   GK  + V   N      ++ +   S   P  +  G  
Sbjct: 99  DSSQDQPALSFDGRYLVYVSTERGKSDIMVYDRNQQRSTLLTANVRGSVRQPTITGDGSQ 158

Query: 361 IAFTKFSGEKFAIGVMKKDGS 381
           +AF      ++ I ++    S
Sbjct: 159 VAFQTSQLGEWNIAIVDYQTS 179



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 10/130 (7%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDPV 353
           N+       +YS D   + F S+R+G   +Y+       QKR+        +++S   P 
Sbjct: 50  NSKSPEEYPTYSGDGRFLAFASERQGHRDIYLFDL---QQKRLVSLPNLNRRDSSQDQPA 106

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKD 411
            S  G  + +      K  I V  ++  +  LL  +   +++ PT +  G  + F   + 
Sbjct: 107 LSFDGRYLVYVSTERGKSDIMVYDRNQQRSTLLTANVRGSVRQPTITGDGSQVAFQTSQL 166

Query: 412 GDTGSKLYSI 421
           G+    +   
Sbjct: 167 GEWNIAIVDY 176



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 49/132 (37%), Gaps = 4/132 (3%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFRSMILAPRFS 266
           +       P +S + + +A+A+        +YL D +  R      +    S    P  S
Sbjct: 50  NSKSPEEYPTYSGDGRFLAFASERQGH-RDIYLFDLQQKRLVSLPNLNRRDSSQDQPALS 108

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGK 325
            +G+  +    +    DI   D     +  LT N        + + D SQ+ F++ + G+
Sbjct: 109 FDGRYLVYVSTERGKSDIMVYDRNQQRSTLLTANVRGSVRQPTITGDGSQVAFQTSQLGE 168

Query: 326 EQLYVMQSNGSD 337
             + ++    S 
Sbjct: 169 WNIAIVDYQTSP 180



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 32/86 (37%), Gaps = 1/86 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
              RD    +P  S + + + Y + +      + + D    R+     N R  +  P  +
Sbjct: 95  LNRRDSSQDQPALSFDGRYLVYVSTERGKS-DIMVYDRNQQRSTLLTANVRGSVRQPTIT 153

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSN 292
            +G +      +    +I  VD Q++
Sbjct: 154 GDGSQVAFQTSQLGEWNIAIVDYQTS 179



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 32/96 (33%), Gaps = 8/96 (8%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFS 407
           P +S  G  +AF         I +      +   L      DS+   P  S  GR L++ 
Sbjct: 58  PTYSGDGRFLAFASERQGHRDIYLFDLQQKRLVSLPNLNRRDSSQDQPALSFDGRYLVYV 117

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTP--AYASDPQ 441
             + G   S +   D N +  TL+          P 
Sbjct: 118 STERGK--SDIMVYDRNQQRSTLLTANVRGSVRQPT 151



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           L   S  + PT+S  GR L F+ ++ G     +Y  DL  + + L++ P
Sbjct: 49  LNSKSPEEYPTYSGDGRFLAFASERQGHR--DIYLFDL--QQKRLVSLP 93


>gi|294054499|ref|YP_003548157.1| PBS lyase HEAT domain protein repeat-containing protein
           [Coraliomargarita akajimensis DSM 45221]
 gi|293613832|gb|ADE53987.1| PBS lyase HEAT domain protein repeat-containing protein
           [Coraliomargarita akajimensis DSM 45221]
          Length = 1167

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 20/154 (12%)

Query: 251 KRIGNFR-SMILAPRFSSNGKRALIS---VQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           K++  F    +     S +G + L +   +  D    IY ++      ++LT   + +  
Sbjct: 682 KQLTQFESGYVADLEVSYDGNKLLFTRATMDPDPWFHIYEMNADGTDLKQLTFGPYHDTH 741

Query: 307 ASYSPDSSQIVFESDREG---------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            +Y PD  +IVF S R G            L VM  +GSD + I  +      DPV    
Sbjct: 742 PNYMPDG-RIVFTSSRTGMRDEYHGYPSNGLAVMNRDGSDIQVIGFN-IGRDADPVIGDD 799

Query: 358 G-----DLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           G      L  F      ++ +     DG     L
Sbjct: 800 GMILFTRLELFYSRMKTEWNLLAAFPDGRSTATL 833



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 69/191 (36%), Gaps = 38/191 (19%)

Query: 267 SNG--KRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            +G  KR +     ++    D  S D+        T+    +   +Y            R
Sbjct: 625 PSGLPKRLVFIKGEREPGNSDQISKDM--------TSYSVTDGGPTY------------R 664

Query: 323 EGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMKK 378
            G+    +  +N     K+++Q +     D   S  G+ + FT+ +      F I  M  
Sbjct: 665 LGRNLFTIDTANPEGSLKQLTQFESGYVADLEVSYDGNKLLFTRATMDPDPWFHIYEMNA 724

Query: 379 DGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKK-------DGDTGSKLYSIDLNGRNETL 430
           DG+  + L     +   P + P GR ++F+  +        G   + L  ++ +G +  +
Sbjct: 725 DGTDLKQLTFGPYHDTHPNYMPDGR-IVFTSSRTGMRDEYHGYPSNGLAVMNRDGSDIQV 783

Query: 431 INTP-AYASDP 440
           I       +DP
Sbjct: 784 IGFNIGRDADP 794



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 47/150 (31%), Gaps = 19/150 (12%)

Query: 181 SESVVSGIIKNSL--CVMDRDGANI----RYLTPSRDQILFEPRFSPNQQKVAYA--TYD 232
           S SV  G     L   +   D AN     + LT      + +   S +  K+ +   T D
Sbjct: 653 SYSVTDGGPTYRLGRNLFTIDTANPEGSLKQLTQFESGYVADLEVSYDGNKLLFTRATMD 712

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY------- 285
            +    +Y M+       K++         P +  +G R + +  +    D Y       
Sbjct: 713 PDPWFHIYEMNAD-GTDLKQLTFGPYHDTHPNYMPDG-RIVFTSSRTGMRDEYHGYPSNG 770

Query: 286 --SVDLQSNATERLTNTLFINISASYSPDS 313
              ++   +  + +   +  +       D 
Sbjct: 771 LAVMNRDGSDIQVIGFNIGRDADPVIGDDG 800


>gi|145517799|ref|XP_001444779.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412208|emb|CAK77382.1| unnamed protein product [Paramecium tetraurelia]
          Length = 852

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 96/295 (32%), Gaps = 43/295 (14%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
                   L    RLWD K  +QI   +            H    +  +    +      
Sbjct: 297 YATLASGSLDKSIRLWDSKAGQQIAKLE-----------GHKSCINSIRFSPDD------ 339

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                  +++S    NS+ + D      +    +          SP+   +A  ++D+  
Sbjct: 340 ------NTLISSSYDNSIRLWDIKTKQQKAQVNACVYQFRSLCVSPDGNTIAIGSWDN-- 391

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              + ++DT+  +   ++   ++ +L+  FS +G     S   D ++ ++     S   +
Sbjct: 392 --SIRILDTKTGQQQDKLDGHQNQVLSSCFSPDGTTLA-SGSLDNSIRLW----DSKTGQ 444

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           ++     I     S  +SPD + +   S       + +        K   +    S    
Sbjct: 445 QIAKFDSIQNSVASVCFSPDGTTLASGSS---NSSIRLWDIKIGQHKAKLEGHTKSIISV 501

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
            +S  G  +A     G   +I +       ++  ++     + +  +SP   +L 
Sbjct: 502 CFSSDGTTLA---SGGYDSSICLWDVKTGYQKTNLDGHTGTVWSVCFSPDNTTLA 553



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 46/348 (13%), Positives = 97/348 (27%), Gaps = 73/348 (20%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                  L    RLWD K  +QI                 +I + +        G     
Sbjct: 424 TTLASGSLDNSIRLWDSKTGQQIAKF-------------DSIQNSVASVCFSPDG----- 465

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG   +S+ + D      +       + +    FS +   +A   YD    
Sbjct: 466 -----TTLASGSSNSSIRLWDIKIGQHKAKLEGHTKSIISVCFSSDGTTLASGGYDS--- 517

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D +       +      + +  FS +      S  +D ++ ++  ++++   + 
Sbjct: 518 -SICLWDVKTGYQKTNLDGHTGTVWSVCFSPDNTTLA-SGCQDGSICLW--NVRTGQQQA 573

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +         S  YS D + +   S       + +  +    Q       + S     +S
Sbjct: 574 KFNGHTSTVYSVCYSFDGTTLASGSQ---DNSICLWDNKTGQQLAKLDGHQQSVLSVNFS 630

Query: 356 PQGDLIAFTKFSG--------------------------------EKFAIGVMKKDGSQE 383
           P G  +A                                         +I +      Q+
Sbjct: 631 PDGTTVASGSNDNSICLWDVKTGVIHQQLIQSIFLLMVLHQASGSGDNSIRLWDIKTGQQ 690

Query: 384 RLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           + L +       +  +SP G +L       G   + +   D+  R + 
Sbjct: 691 KALFDGHTDYVRSVYFSPDGTTLA-----SGSYDNSIRLWDVETRKQK 733



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 90/253 (35%), Gaps = 18/253 (7%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ SG +  S+ + D                +   RFSP+   +  ++YD+     + L 
Sbjct: 299 TLASGSLDKSIRLWDSKAGQQIAKLEGHKSCINSIRFSPDDNTLISSSYDN----SIRLW 354

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTL 301
           D +  +   ++        +   S +G    I    +    I  +D ++   + +L    
Sbjct: 355 DIKTKQQKAQVNACVYQFRSLCVSPDGNTIAIGSWDN---SIRILDTKTGQQQDKLDGHQ 411

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              +S+ +SPD + +   S       + +  S    Q       + S     +SP G  +
Sbjct: 412 NQVLSSCFSPDGTTLASGSL---DNSIRLWDSKTGQQIAKFDSIQNSVASVCFSPDGTTL 468

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A +  S     +  +K    + +L     ++ +  +S  G +L       G   S +   
Sbjct: 469 A-SGSSNSSIRLWDIKIGQHKAKLEGHTKSIISVCFSSDGTTLA-----SGGYDSSICLW 522

Query: 422 DL-NGRNETLINT 433
           D+  G  +T ++ 
Sbjct: 523 DVKTGYQKTNLDG 535



 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/242 (13%), Positives = 73/242 (30%), Gaps = 46/242 (19%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--------------------------- 234
           N       R   + +  FS N +++   + D+                            
Sbjct: 194 NELMEFNGRGGRVKQISFSQNGRQLVTCSEDNSIRFLDVKTGKINFVLQGHKEGQSGSFS 253

Query: 235 ---------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                        VYL++ +  +   ++      +    FS++      S   D+++ ++
Sbjct: 254 INDTILACCSDRFVYLVNLKTGKQMLKLIGHTGKVRTVCFSNDYATLA-SGSLDKSIRLW 312

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                     +L        S  +SPD + ++  S       + +       QK      
Sbjct: 313 D-SKAGQQIAKLEGHKSCINSIRFSPDDNTLISSSY---DNSIRLWDIKTKQQKAQVNAC 368

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRS 403
              +     SP G+ IA   +      I ++     Q++  ++    Q  +  +SP G +
Sbjct: 369 VYQFRSLCVSPDGNTIAIGSWDNS---IRILDTKTGQQQDKLDGHQNQVLSSCFSPDGTT 425

Query: 404 LI 405
           L 
Sbjct: 426 LA 427



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 7/117 (5%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
            L +     SG   NS+ + D      + L       +    FSP+   +A  +YD+   
Sbjct: 664 FLLMVLHQASGSGDNSIRLWDIKTGQQKALFDGHTDYVRSVYFSPDGTTLASGSYDN--- 720

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
             + L D    +   ++    S + +  FS +    L S   D ++ ++  D++S  
Sbjct: 721 -SIRLWDVETRKQKAKLDGHTSTVYSVCFSPD-NSILASGSDDSSIRLW--DVKSKQ 773



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 22/187 (11%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           F   ++ SG   NS+C+ D              Q +    FSP+   VA  + D+     
Sbjct: 589 FDGTTLASGSQDNSICLWDNKTGQQLAKLDGHQQSVLSVNFSPDGTTVASGSNDN----S 644

Query: 239 VYLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           + L D +     +++    F  M+L             S   D ++ ++  D+++   + 
Sbjct: 645 ICLWDVKTGVIHQQLIQSIFLLMVLHQA----------SGSGDNSIRLW--DIKTGQQKA 692

Query: 297 LTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           L +       S  +SPD + +   S       + +       QK       ++ +   +S
Sbjct: 693 LFDGHTDYVRSVYFSPDGTTLASGSY---DNSIRLWDVETRKQKAKLDGHTSTVYSVCFS 749

Query: 356 PQGDLIA 362
           P   ++A
Sbjct: 750 PDNSILA 756


>gi|325294446|ref|YP_004280960.1| hypothetical protein Dester_0244 [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325064894|gb|ADY72901.1| WD40 repeat-containing protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 691

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 78/235 (33%), Gaps = 31/235 (13%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +   +    +    FSPN   +AY +Y        V ++D         +      +   
Sbjct: 54  WEKWNSKNWILSVTFSPNGNWIAYGSYSSFNGRGTVTIIDPLTGNRKAVLYTTGGQVEKL 113

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDR 322
             S +G     +      +DI+  D++S    + L        S ++SP+   +   +D 
Sbjct: 114 AVSPDGNLIA-AGNAGGTIDIF--DVKSKEKIKTLREHKRTISSIAFSPNGKLLA-SADY 169

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +G  +L+ +          + +   ++      +SP    +A          + +     
Sbjct: 170 DGVVKLWDLN---------TWEPIKTFSGKLVAFSPDSKYLAILNRK----ELFIYDISK 216

Query: 381 SQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
                ++   NL  P     +SP G  + FS          +Y + ++  N+  I
Sbjct: 217 GNTSKILSLKNLYGPVDTICFSPDGTLIAFS------NFDNIYILKVSKDNKMQI 265



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 104/289 (35%), Gaps = 51/289 (17%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           + I        G++ +   + S +      + ++ ++D    N + +  +    + +   
Sbjct: 61  NWILSVTFSPNGNWIAYGSYSSFNG-----RGTVTIIDPLTGNRKAVLYTTGGQVEKLAV 115

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   +A           + + D +     K +   +  I +  FS NGK    S   D
Sbjct: 116 SPDGNLIA----AGNAGGTIDIFDVKSKEKIKTLREHKRTISSIAFSPNGKLLA-SADYD 170

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             + ++  DL +    +  +   +    ++SPDS  +   +    +++L++   +  +  
Sbjct: 171 GVVKLW--DLNTWEPIKTFSGKLV----AFSPDSKYLAILN----RKELFIYDISKGNTS 220

Query: 340 RISQDKE--ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD----------------GS 381
           +I   K          +SP G LIAF+ F      I ++K                  G+
Sbjct: 221 KILSLKNLYGPVDTICFSPDGTLIAFSNFD----NIYILKVSKDNKMQIKLKMKKVIKGT 276

Query: 382 QERLLVED----SNLQAPTWSPSGRSLI-----FSRKKDGDTGSKLYSI 421
           Q R  +E       + + ++SP  + +      F + +       ++ +
Sbjct: 277 QYRKRMEHYPNYGEILSMSFSPDSKLIAIGTINFFKNRPQAGVVAIFDV 325



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/249 (18%), Positives = 88/249 (35%), Gaps = 45/249 (18%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ + D              + +    FSPN + +A A YD      V L D  
Sbjct: 124 AGNAGGTIDIFDVKSKEKIKTLREHKRTISSIAFSPNGKLLASADYDG----VVKLWDLN 179

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLF 302
                K    F   ++A  FS + K   I  +K    +++  D+    T +   L N   
Sbjct: 180 TWEPIK---TFSGKLVA--FSPDSKYLAILNRK----ELFIYDISKGNTSKILSLKNLYG 230

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI------------------SQD 344
              +  +SPD + I F +     + +Y+++ +  ++ +I                     
Sbjct: 231 PVDTICFSPDGTLIAFSNF----DNIYILKVSKDNKMQIKLKMKKVIKGTQYRKRMEHYP 286

Query: 345 KEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTW 397
                    +SP   LIA     F K   +   + +          L+E   +++++ T+
Sbjct: 287 NYGEILSMSFSPDSKLIAIGTINFFKNRPQAGVVAIFDVKTGTCIKLLEKYRNDVRSVTF 346

Query: 398 SPSGRSLIF 406
           SP G  + F
Sbjct: 347 SPDGSMIAF 355



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 75/211 (35%), Gaps = 18/211 (8%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEA 281
             VA    +   + ++  +  +I        N ++ IL+  FS NG           +  
Sbjct: 27  NSVASPQKEKFKLPKIRTIPNKITLDVWEKWNSKNWILSVTFSPNGNWIAYGSYSSFNGR 86

Query: 282 MDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             +  +D  +   + +  T    +   + SPD + I    +  G   + +      ++ +
Sbjct: 87  GTVTIIDPLTGNRKAVLYTTGGQVEKLAVSPDGNLIA-AGNAGGT--IDIFDVKSKEKIK 143

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
             ++ + +     +SP G L+A   + G    + +   +  +         +    +SP 
Sbjct: 144 TLREHKRTISSIAFSPNGKLLASADYDG---VVKLWDLNTWEPIKTFSGKLV---AFSPD 197

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            + L    +K      +L+  D++  N + I
Sbjct: 198 SKYLAILNRK------ELFIYDISKGNTSKI 222



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 64/207 (30%), Gaps = 27/207 (13%)

Query: 193 LCVMDRDG----ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           L   D DG     ++    P +        FSP+ +   Y    +   L +Y +      
Sbjct: 164 LASADYDGVVKLWDLNTWEPIKTFSGKLVAFSPDSK---YLAILNRKELFIYDISKGNTS 220

Query: 249 APKRIGNFRSMILAPRFSSNGKRALIS---------VQKDEAMDI---YSVDLQSNATER 296
               + N    +    FS +G     S         V KD  M I       ++     +
Sbjct: 221 KILSLKNLYGPVDTICFSPDGTLIAFSNFDNIYILKVSKDNKMQIKLKMKKVIKGTQYRK 280

Query: 297 LTNTLFINI---SASYSPDSSQIV-----FESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                       S S+SPDS  I      F  +R     + +         ++ +     
Sbjct: 281 RMEHYPNYGEILSMSFSPDSKLIAIGTINFFKNRPQAGVVAIFDVKTGTCIKLLEKYRND 340

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                +SP G +IAF   SGE   + V
Sbjct: 341 VRSVTFSPDGSMIAFGCHSGELGVLKV 367


>gi|209525976|ref|ZP_03274510.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
 gi|209493653|gb|EDZ93974.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
          Length = 687

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 99/281 (35%), Gaps = 20/281 (7%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R+  +  S  +    +G+   ++  I    + V SG    S+ ++D D   +       +
Sbjct: 374 RRYQNRQSSGVRTLRSGDGPIWSIAITPDGQLVASGQTDGSINLVDIDTGTVVNTLSGHN 433

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           Q +     +P  + +A           + + D    R  + +   R  + A  FS +G  
Sbjct: 434 QPVGTIAIAPEGRFLA----SAGGDGTIRIWDLWNSRLVRVLPGHRGWVHALAFSPDGAS 489

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYV 330
              S   D ++ ++  ++ +   ER        I A ++S +   ++  S       L +
Sbjct: 490 LA-SAGGDGSIRLW--NVDTGFEERTLRGYEEQIQAIAFSANGQMLISGSS---NGLLEL 543

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-----DGSQERL 385
                 + +R       + +    SP G  +A   +        + +           + 
Sbjct: 544 WDRETGELRRSLAAHPQAIWSLAVSPDGQTLATGSWDRTVRLWDLNRLELEYFTSLPLQT 603

Query: 386 LV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           L   D  +Q+ ++SP G++L      D D   KL+ I   G
Sbjct: 604 LTGHDEKIQSLSFSPDGQTLA---SGDFDGTVKLWQIRPGG 641


>gi|299739644|ref|XP_001839668.2| ribosome assembly protein 4 [Coprinopsis cinerea okayama7#130]
 gi|298403872|gb|EAU82152.2| ribosome assembly protein 4 [Coprinopsis cinerea okayama7#130]
          Length = 1320

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 71/225 (31%), Gaps = 23/225 (10%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+   +A  ++D  + +R++   +      + +      + +  FS +G R   S  
Sbjct: 977  AFSPDGSCIASGSWD--NTIRIWDAHSG-KALLEPMQGHTDWVTSVAFSPDGSRIA-SGS 1032

Query: 278  KDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             D  + I+  D  S     E +        S ++SPD S I F S       + V  +  
Sbjct: 1033 WDNTICIW--DAHSGKALLESMQGHTDWVTSVAFSPDGSCIAFGSH---DNTIRVWDAYS 1087

Query: 336  SDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
                         +     +SP G  IA          I +      +  L     +   
Sbjct: 1088 GKALLEPMQGHTDWVTSVAFSPDGSRIASGSHDNT---IRIWDAHSGKALLEPMQWHTNP 1144

Query: 394  --APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
              +  +SP G  +       G   + +   D +     L     +
Sbjct: 1145 VTSVAFSPDGFRIA-----SGSRDNTICIWDAHSGKALLEPMQGH 1184



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 90/305 (29%), Gaps = 50/305 (16%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     R+WD    K ++               HT  D +        G        
Sbjct: 986  ASGSWDNTIRIWDAHSGKALLE----------PMQGHT--DWVTSVAFSPDG-------- 1025

Query: 180  VSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
                + SG   N++C+ D   G  +          +    FSP+   +A+ ++D+     
Sbjct: 1026 --SRIASGSWDNTICIWDAHSGKALLESMQGHTDWVTSVAFSPDGSCIAFGSHDN----T 1079

Query: 239  VYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + D    +A  + +      + +  FS +G R   S   D  + I+  D  S     L
Sbjct: 1080 IRVWDAYSGKALLEPMQGHTDWVTSVAFSPDGSRIA-SGSHDNTIRIW--DAHSGKA--L 1134

Query: 298  TNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDP 352
               +  + +     ++SPD  +I   S       + +  ++              +    
Sbjct: 1135 LEPMQWHTNPVTSVAFSPDGFRIASGSR---DNTICIWDAHSGKALLEPMQGHTDWVTSV 1191

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS----PSGRSLIFSR 408
             +SP G  IA             +    +      +      P  S      G    + R
Sbjct: 1192 AFSPDGSCIATGSNDKTVRN-WTLHPSPNSSLTATQIFAHHYPFLSLRMGNDG----WIR 1246

Query: 409  KKDGD 413
             + GD
Sbjct: 1247 NQSGD 1251


>gi|302384287|ref|YP_003820110.1| acylamino-acid-releasing enzyme [Brevundimonas subvibrioides ATCC
           15264]
 gi|302194915|gb|ADL02487.1| acylamino-acid-releasing enzyme [Brevundimonas subvibrioides ATCC
           15264]
          Length = 705

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 107/331 (32%), Gaps = 72/331 (21%)

Query: 175 SRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +R+++   +    +    +SL +    G          DQ     R+  +     Y    
Sbjct: 70  TRVVYSVRATDMAANRGVSSLMIQSLTGEGDARRLAISDQGANTARWGSDGN--LYFLSG 127

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------- 277
                +V+  D    + P ++ +    + A R S + ++  +S+                
Sbjct: 128 KSGTSQVWRAD-AQGQNPVQVTDLPIDVNAYRLSPDARKIAVSLAVYPDCDDLACSVARG 186

Query: 278 ------------------------KDEAMD-IYSVDLQSNATERLTNTLFINISAS---- 308
                                    D   + ++ V+   +         F   + S    
Sbjct: 187 TEAAARPSTGQVYDRMFVRHWDTWADGTQNHLFVVNADGSGEPAWVTHGFDGDTPSKPFG 246

Query: 309 ------YSPDSSQIVFESDREGKEQLYVMQSN--------GSDQKRISQDKEASYFDPVW 354
                 ++PDS+ IVF +   G+ + +    +        G     ++ D +A    PV+
Sbjct: 247 DENEFTFTPDSAAIVFSARVAGQTEPWSTNFDLFRTNGLTGPGFTNLTDDNDAWDTGPVY 306

Query: 355 SPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFS 407
           SP G  +A+       F  +++ I +M      +R +  D +  + T  WS  GRSL   
Sbjct: 307 SPDGRTLAYRAMKRPGFEADRYQIVLMDVATGAKREVAADWDRSSDTLQWSADGRSLFVI 366

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
               G T  KL+ ID        I    + S
Sbjct: 367 AGDVGQT--KLFQIDAANGAVVPITGQGHVS 395



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 54/376 (14%), Positives = 115/376 (30%), Gaps = 78/376 (20%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGK--KFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           RV  +G  R+    R  D+   + +     +  +     R++A  ISD   Q     +  
Sbjct: 64  RVSPDGT-RVVYSVRATDMAANRGVSSLMIQSLTGEGDARRLA--ISD---QGANTARWG 117

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----- 227
            +  + F+S    +    + +   D  G N   +T     +    R SP+ +K+A     
Sbjct: 118 SDGNLYFLSGKSGT----SQVWRADAQGQNPVQVTDLPIDVNAY-RLSPDARKIAVSLAV 172

Query: 228 ----------------------------------YATYDDEDILRVYLMDTRIDRAPKRI 253
                                             + T+ D     +++++      P  +
Sbjct: 173 YPDCDDLACSVARGTEAAARPSTGQVYDRMFVRHWDTWADGTQNHLFVVNADGSGEPAWV 232

Query: 254 GNFR---------SMILAPRFSSNGKRALISVQKDEAMDIYSVD--------LQSNATER 296
            +                  F+ +    + S +     + +S +        L       
Sbjct: 233 THGFDGDTPSKPFGDENEFTFTPDSAAIVFSARVAGQTEPWSTNFDLFRTNGLTGPGFTN 292

Query: 297 LTNTL-FINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYF 350
           LT+     +    YSPD   + + +  R G    + Q+ +M      ++ ++ D + S  
Sbjct: 293 LTDDNDAWDTGPVYSPDGRTLAYRAMKRPGFEADRYQIVLMDVATGAKREVAADWDRSSD 352

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              WS  G  +        +  +  +         +    ++ A   +PSG  +      
Sbjct: 353 TLQWSADGRSLFVIAGDVGQTKLFQIDAANGAVVPITGQGHVSAFEQTPSGFVIA---MD 409

Query: 411 DGDTGSKLYSIDLNGR 426
              + S+LY     GR
Sbjct: 410 SLTSPSELYVKTFRGR 425



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/284 (14%), Positives = 91/284 (32%), Gaps = 70/284 (24%)

Query: 214 LFEPRFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           L +PR SP+  +V Y+        +  +  + +     +   +R+          R+ S+
Sbjct: 60  LSDPRVSPDGTRVVYSVRATDMAANRGVSSLMIQSLTGEGDARRLAISDQGANTARWGSD 119

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVF--------- 318
           G        K     ++  D Q     ++T+   I+++A   SPD+ +I           
Sbjct: 120 GN-LYFLSGKSGTSQVWRADAQGQNPVQVTDLP-IDVNAYRLSPDARKIAVSLAVYPDCD 177

Query: 319 --------------------ESDR-----------EGKEQLYVMQSNGSDQKR-ISQDKE 346
                                 DR             +  L+V+ ++GS +   ++   +
Sbjct: 178 DLACSVARGTEAAARPSTGQVYDRMFVRHWDTWADGTQNHLFVVNADGSGEPAWVTHGFD 237

Query: 347 ASY--------FDPVWSPQGDLIAFTKFSGE-------KFAIGVMK-KDGSQERLLVEDS 390
                       +  ++P    I F+             F +       G     L +D+
Sbjct: 238 GDTPSKPFGDENEFTFTPDSAAIVFSARVAGQTEPWSTNFDLFRTNGLTGPGFTNLTDDN 297

Query: 391 NLQ--APTWSPSGRSLIFSRKKDGDTGS---KLYSIDLNGRNET 429
           +     P +SP GR+L +   K     +   ++  +D+    + 
Sbjct: 298 DAWDTGPVYSPDGRTLAYRAMKRPGFEADRYQIVLMDVATGAKR 341



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 72/232 (31%), Gaps = 62/232 (26%)

Query: 263 PRFSSNGKRALISVQKD------EAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQ 315
           PR S +G R + SV+            +    L       RL  +     +A +  D + 
Sbjct: 63  PRVSPDGTRVVYSVRATDMAANRGVSSLMIQSLTGEGDARRLAISDQGANTARWGSDGN- 121

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA------------- 362
           + F S + G  Q++   + G +  +++ D          SP    IA             
Sbjct: 122 LYFLSGKSGTSQVWRADAQGQNPVQVT-DLPIDVNAYRLSPDARKIAVSLAVYPDCDDLA 180

Query: 363 ----------------------FTKF-----SGEKFAIGVMKKDGSQERL-LVEDSNLQA 394
                                 F +       G +  + V+  DGS E   +    +   
Sbjct: 181 CSVARGTEAAARPSTGQVYDRMFVRHWDTWADGTQNHLFVVNADGSGEPAWVTHGFDGDT 240

Query: 395 PT----------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           P+          ++P   +++FS +  G T    +S + +      +  P +
Sbjct: 241 PSKPFGDENEFTFTPDSAAIVFSARVAGQTEP--WSTNFDLFRTNGLTGPGF 290



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 32/94 (34%), Gaps = 11/94 (11%)

Query: 347 ASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWS 398
               DP  SP G  + ++        +    ++ +    G     RL + D       W 
Sbjct: 58  NRLSDPRVSPDGTRVVYSVRATDMAANRGVSSLMIQSLTGEGDARRLAISDQGANTARWG 117

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             G  L F   K G   S+++  D  G+N   + 
Sbjct: 118 SDGN-LYFLSGKSGT--SQVWRADAQGQNPVQVT 148


>gi|154490968|ref|ZP_02030909.1| hypothetical protein PARMER_00885 [Parabacteroides merdae ATCC
           43184]
 gi|154088716|gb|EDN87760.1| hypothetical protein PARMER_00885 [Parabacteroides merdae ATCC
           43184]
          Length = 483

 Score = 76.6 bits (187), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 51/347 (14%), Positives = 105/347 (30%), Gaps = 67/347 (19%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASW----RKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RL D      +    +      W          I D I   +   +     R+       
Sbjct: 89  RLLDASVGGNLTVGIYICKDNRWFRYPPFSIQVIKDKIDPYLVYRRIAPGYRMW------ 142

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-----PNQQKVAYATYDDEDILRV 239
                         D     +L   +         S     P+  ++ +          +
Sbjct: 143 ---NRMGIYQRCLEDFTEETFLDNKQTNNNCMNCHSFCMQNPD--RMLFHQRALHAGTYI 197

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------DEAMD 283
            L D  I++   +     S ++ P +  +G+    S                   D   D
Sbjct: 198 -LTDGDIEKLDTKTERTISALVYPAWHPSGRYVAFSTNDTKQDFHLSDANRVEVFDNRSD 256

Query: 284 IYSVDLQSNA---TERLTNTLFINISASYSPDSSQIVFES---------DREGKEQLYVM 331
           +   D++ +       L++   +    ++SPD  ++ F S          RE +  L  +
Sbjct: 257 VVVYDVEKHEIVTAPHLSSEENMETFPAFSPDGRRLYFCSAPACRMPESYREIRYNLQSI 316

Query: 332 QSNGSDQ---KRISQDKEASYFD-----PVWSPQGDLIAFTKFSGEKFAIGVMKKD---- 379
             +   +   + I     A+        P  SP G  + +T      F+I     D    
Sbjct: 317 AFDPEKRSFGQTIDTLYNANEEGRSAKLPRVSPDGRFLMYTVSDYGNFSIWHKDADLRLL 376

Query: 380 ----GSQERLL-VEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYS 420
               G  + LL V  +++++  +WS + R  +FS +++    ++ Y 
Sbjct: 377 DMLTGKTDSLLQVNSNDVESYHSWSSNSRWFVFSSRRNDGLYTRPYI 423


>gi|317046248|ref|YP_004113896.1| hypothetical protein Pat9b_0010 [Pantoea sp. At-9b]
 gi|316947865|gb|ADU67340.1| conserved hypothetical protein [Pantoea sp. At-9b]
          Length = 420

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 13/142 (9%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISAS-Y---SPDSSQIVF-ESDREGKEQLYVMQSN 334
              D            R+T+T  + +    +   +PD S I F  +D  G  QL+ +  N
Sbjct: 270 GTPDQLPAPPSGVQQRRVTHTHGLALQPRHWLRAAPDGSAIAFLMADNNGVVQLWTVSPN 329

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-- 392
           G   ++++Q   +      W P G+ I+F   +    ++   +    +   L + S+   
Sbjct: 330 GGAPRQVTQLTSSIQSAFSWQPSGNAISFVCDN----SVMRCELTSGKCTRLTQRSDQPP 385

Query: 393 --QAPTWSPSGRSLIFSRKKDG 412
              A  WSP G  + + R  +G
Sbjct: 386 SGDAVVWSPDGAKIAYMRDVNG 407



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 12/142 (8%)

Query: 246 IDRAPKRIGNFRSMILAPR-F---SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTN- 299
                +R+ +   + L PR +   + +G          +  + +++V     A  ++T  
Sbjct: 280 SGVQQRRVTHTHGLALQPRHWLRAAPDGSAIAFLMADNNGVVQLWTVSPNGGAPRQVTQL 339

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQ 357
           T  I  + S+ P  + I F  D      +   +       R++Q  D+  S    VWSP 
Sbjct: 340 TSSIQSAFSWQPSGNAISFVCDNS----VMRCELTSGKCTRLTQRSDQPPSGDAVVWSPD 395

Query: 358 GDLIAFTKFSGEKFAIGVMKKD 379
           G  IA+ +       +  +   
Sbjct: 396 GAKIAYMRDVNGWRQLFCVSAT 417



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 50/140 (35%), Gaps = 15/140 (10%)

Query: 203 IRYLTPSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            +        +  +PR     +P+   +A+   D+  +++++ +        +      S
Sbjct: 283 QQRRVTHTHGLALQPRHWLRAAPDGSAIAFLMADNNGVVQLWTVSPNGGAPRQVTQLTSS 342

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-----YSPDS 313
           +  A  +  +G              +   +L S    RLT     +   S     +SPD 
Sbjct: 343 IQSAFSWQPSGNAISFVCDNS----VMRCELTSGKCTRLTQRS--DQPPSGDAVVWSPDG 396

Query: 314 SQIVFESDREGKEQLYVMQS 333
           ++I +  D  G  QL+ + +
Sbjct: 397 AKIAYMRDVNGWRQLFCVSA 416



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 34/98 (34%), Gaps = 3/98 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +  +G   R +T     I     + P+   +++    D  ++R  L   +  R  +
Sbjct: 322 QLWTVSPNGGAPRQVTQLTSSIQSAFSWQPSGNAISFV--CDNSVMRCELTSGKCTRLTQ 379

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           R     S   A  +S +G +       +    ++ V  
Sbjct: 380 RSDQPPSGD-AVVWSPDGAKIAYMRDVNGWRQLFCVSA 416


>gi|220918843|ref|YP_002494147.1| hypothetical protein A2cp1_3755 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956697|gb|ACL67081.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 1041

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 67/184 (36%), Gaps = 13/184 (7%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  L V   DG     +          P FS +   +A+    ++    VY++      
Sbjct: 453 KRRKLDVRPPDGRRFITIAD--------PTFSADASHLAFVGVAEDGQQDVYVVPV-TGG 503

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +R+ N         + ++G            ++++ +D  + A  RLT     +    
Sbjct: 504 VARRLTNDGYTEKDLHWGADGLYCASDATDHGRLNLFRIDPATGARTRLTTAASTDRHPY 563

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
              D S ++F SD  GK  LY+++      +R++ D       P  +P+   +    F+G
Sbjct: 564 PQADGS-VLFSSDARGKPDLYLLK--DGAIQRLT-DFTTGLTSPAVAPKARGVLAATFNG 619

Query: 369 EKFA 372
             F 
Sbjct: 620 GLFR 623



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 60/151 (39%), Gaps = 4/151 (2%)

Query: 263 PRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           P FS++        V +D   D+Y V +      RLTN  +      +  D      ++ 
Sbjct: 473 PTFSADASHLAFVGVAEDGQQDVYVVPVTGGVARRLTNDGYTEKDLHWGADGLYCASDAT 532

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G+  L+ +      + R++     +   P     G  + F+  +  K  + ++K DG+
Sbjct: 533 DHGRLNLFRIDPATGARTRLTTAAS-TDRHPYPQADGS-VLFSSDARGKPDLYLLK-DGA 589

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +RL    + L +P  +P  R ++ +    G
Sbjct: 590 IQRLTDFTTGLTSPAVAPKARGVLAATFNGG 620


>gi|297196866|ref|ZP_06914263.1| WD40 repeat protein [Streptomyces sviceus ATCC 29083]
 gi|197711539|gb|EDY55573.1| WD40 repeat protein [Streptomyces sviceus ATCC 29083]
          Length = 1351

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 90/260 (34%), Gaps = 21/260 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++ +    N+  + D     +R+        +    FSPN + +A A+ D      V L
Sbjct: 1084 RTLATASDDNTARLWDTTTGRVRHKLTGHTGAVNAVAFSPNGRTLATASDDQ----TVRL 1139

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
             DT   +  +R+      + A  FS +G+    +  +D ++ ++  D  S A   RL   
Sbjct: 1140 WDTANGKFRRRLNMRMKEVYAVAFSPDGRTLA-TGGEDHSVRLW--DPASGALRARLDKH 1196

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   ++SPD   +           +++        +R            V+SP G  
Sbjct: 1197 SESVSVVAFSPDGHTLA---TGGADSAVWLWDVTRHKARRRISGHTGDVSGVVFSPDGHT 1253

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A    +G+   I +      + R     +     A  ++P   +L       G    KL
Sbjct: 1254 LA---TTGDDGIIILSDPTTGKLRRAFSGDTGGEYALAYAPHSHTLA----ALGVKTVKL 1306

Query: 419  YSIDLNGRNETLINTPAYAS 438
            +  D + +   L   P   S
Sbjct: 1307 WDTDRS-KFRALPGLPTRCS 1325



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 82/255 (32%), Gaps = 25/255 (9%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++ +G    +  + D     +R         +    FS +   +A    D      + L
Sbjct: 921  RTLATGAAGRTARLWDPATGELRKTVTGFPDEVVSLTFSLDNHTLATIAKDS----TIQL 976

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             +    +  K    F        +S +G   +  V  D  + +   D  + A+   L   
Sbjct: 977  RNPATGKLRK---TFDYGGFWLVYSPDG---VTCVTGDGDVQLR--DAATGASRETLAGH 1028

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                + A+YSP+   +       G   + +  ++        +D   +     +SP G  
Sbjct: 1029 SGSVLGAAYSPNGRTLA---TAGGDGTVRLWDASARTDHGTFKDPTGAVTAVAFSPNGRT 1085

Query: 361  IAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A            +      + R  L      + A  +SP+GR+L  +     D   +L
Sbjct: 1086 LATASDDNTA---RLWDTTTGRVRHKLTGHTGAVNAVAFSPNGRTLATASD---DQTVRL 1139

Query: 419  YSIDLNGRNETLINT 433
            +    NG+    +N 
Sbjct: 1140 WDT-ANGKFRRRLNM 1153



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/370 (12%), Positives = 101/370 (27%), Gaps = 87/370 (23%)

Query: 112  VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
            V GR +  G        RLWD    +              RK      D++         
Sbjct: 918  VDGRTLATGAAGRTA--RLWDPATGE-------------LRKTVTGFPDEVVSLTFSLDN 962

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
                       ++ +    +++ + +     +R         L    +SP+         
Sbjct: 963  ----------HTLATIAKDSTIQLRNPATGKLRKTFDYGGFWLV---YSPDG---VTCVT 1006

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ- 290
             D D   V L D     + + +      +L   +S NG+    +   D  + ++    + 
Sbjct: 1007 GDGD---VQLRDAATGASRETLAGHSGSVLGAAYSPNGRTLA-TAGGDGTVRLWDASART 1062

Query: 291  ----------------------------------------SNATERLTNTLFINISASYS 310
                                                         +LT       + ++S
Sbjct: 1063 DHGTFKDPTGAVTAVAFSPNGRTLATASDDNTARLWDTTTGRVRHKLTGHTGAVNAVAFS 1122

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            P+   +   SD    + + +  +     +R    +    +   +SP G  +A     GE 
Sbjct: 1123 PNGRTLATASD---DQTVRLWDTANGKFRRRLNMRMKEVYAVAFSPDGRTLA---TGGED 1176

Query: 371  FAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             ++ +        R  ++    ++    +SP G +L        D+   L+ +  +    
Sbjct: 1177 HSVRLWDPASGALRARLDKHSESVSVVAFSPDGHTLA---TGGADSAVWLWDVTRHKARR 1233

Query: 429  TLINTPAYAS 438
             +       S
Sbjct: 1234 RISGHTGDVS 1243



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 66/209 (31%), Gaps = 27/209 (12%)

Query: 129  RLWDVKDRK---QIIGKKFFSSPASW----RKIAHTISDDIYQSITGEKGDFNSRI---- 177
            RLWD    +   ++ G     +  ++    R +A    D   +      G F  R+    
Sbjct: 1096 RLWDTTTGRVRHKLTGHTGAVNAVAFSPNGRTLATASDDQTVRLWDTANGKFRRRLNMRM 1155

Query: 178  --LFVSESVVSGII------KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
              ++       G         +S+ + D     +R       + +    FSP+   +A  
Sbjct: 1156 KEVYAVAFSPDGRTLATGGEDHSVRLWDPASGALRARLDKHSESVSVVAFSPDGHTLA-- 1213

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                     V+L D    +A +RI      +    FS +G     +    +   I   D 
Sbjct: 1214 --TGGADSAVWLWDVTRHKARRRISGHTGDVSGVVFSPDGHTLATT---GDDGIIILSDP 1268

Query: 290  QSNATER-LTNTLFINISASYSPDSSQIV 317
             +    R  +       + +Y+P S  + 
Sbjct: 1269 TTGKLRRAFSGDTGGEYALAYAPHSHTLA 1297



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 12/156 (7%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASY 309
           +R+    S + A  FS +G     S   D  + ++  D  S    R L        + ++
Sbjct: 780 RRLFGHTSEVKAVAFSRDGSTLA-SAGADGTVRLW--DPSSGKPGRILRGHTGAVTALAF 836

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +     +   S     + + +        +        S     +SP+GD +A     G+
Sbjct: 837 NRSGDTLATGS---ADKTIRLWDPATGKTRARHDGYTGSELSVAFSPEGDTLAV----GD 889

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             ++ ++       R        +   +S  GR+L 
Sbjct: 890 AKSVRLVDPATGDTRR-TLPGARRLVAFSVDGRTLA 924



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 68/262 (25%), Gaps = 22/262 (8%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++ S     ++ + D        +       +    F+ +   +A  + D      + L 
Sbjct: 800  TLASAGADGTVRLWDPSSGKPGRILRGHTGAVTALAFNRSGDTLATGSADK----TIRLW 855

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            D    +   R   +    L+  FS  G    +     +A  +  VD  +  T R      
Sbjct: 856  DPATGKTRARHDGYTGSELSVAFSPEGDTLAV----GDAKSVRLVDPATGDTRR--TLPG 909

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 ++S D   +          +L+       + ++             +S     +A
Sbjct: 910  ARRLVAFSVDGRTLA-TGAAGRTARLW--DPATGELRKTVTGFPDEVVSLTFSLDNHTLA 966

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                      I +      + R   +        +SP G          GD   +L    
Sbjct: 967  TIAKDST---IQLRNPATGKLRKTFDYGGFWL-VYSPDG-----VTCVTGDGDVQLRDAA 1017

Query: 423  LNGRNETLINTPAYASDPQWVG 444
                 ETL           +  
Sbjct: 1018 TGASRETLAGHSGSVLGAAYSP 1039


>gi|123444335|ref|YP_001008300.1| hypothetical protein YE4166 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122091296|emb|CAL14182.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 433

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 61/160 (38%), Gaps = 20/160 (12%)

Query: 279 DEAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQL 328
           +                RLT T       +  S   +   SPD S I     D EG  QL
Sbjct: 280 EGTQTTMPAPPAGVRQRRLTFTAERHFPGLATSPRHWLRTSPDGSAIACLMKDDEGVVQL 339

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++  NG + ++++  +        W PQG  + F   +    ++        Q   L  
Sbjct: 340 WLVSPNGGEPRQLTFTEGGIQSAFSWHPQGHSLVFVCDN----SVMQCDSTTGQLWRLTA 395

Query: 389 DSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            S +     A  +SP G  + F R+ DG   ++++++ ++
Sbjct: 396 RSAIAPMADAVVFSPDGTKVAFMREIDG--LAQIFTVKVD 433



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 49/134 (36%), Gaps = 11/134 (8%)

Query: 208 PSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                +   PR     SP+   +A    DDE +++++L+        +       +  A 
Sbjct: 304 RHFPGLATSPRHWLRTSPDGSAIACLMKDDEGVVQLWLVSPNGGEPRQLTFTEGGIQSAF 363

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFES 320
            +   G   +          +   D  +    RLT    I   A    +SPD +++ F  
Sbjct: 364 SWHPQGHSLVFVCDNS----VMQCDSTTGQLWRLTARSAIAPMADAVVFSPDGTKVAFMR 419

Query: 321 DREGKEQLYVMQSN 334
           + +G  Q++ ++ +
Sbjct: 420 EIDGLAQIFTVKVD 433



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 49/139 (35%), Gaps = 15/139 (10%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEA-----SYFDPVW---SPQGDLIA-FTKFSGEKFAI 373
           EG +        G  Q+R++   E      +     W   SP G  IA   K       +
Sbjct: 280 EGTQTTMPAPPAGVRQRRLTFTAERHFPGLATSPRHWLRTSPDGSAIACLMKDDEGVVQL 339

Query: 374 GVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRN 427
            ++  +G + R L   E     A +W P G SL+F           T  +L+ +      
Sbjct: 340 WLVSPNGGEPRQLTFTEGGIQSAFSWHPQGHSLVFVCDNSVMQCDSTTGQLWRLTARSAI 399

Query: 428 ETLINTPAYASDPQWVGFM 446
             + +   ++ D   V FM
Sbjct: 400 APMADAVVFSPDGTKVAFM 418



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 7/101 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++  +G   R LT +   I     + P    + +   +      V   D+   +  +
Sbjct: 338 QLWLVSPNGGEPRQLTFTEGGIQSAFSWHPQGHSLVFVCDN-----SVMQCDSTTGQLWR 392

Query: 252 RIGNF--RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                    M  A  FS +G +     + D    I++V + 
Sbjct: 393 LTARSAIAPMADAVVFSPDGTKVAFMREIDGLAQIFTVKVD 433


>gi|119509017|ref|ZP_01628168.1| hypothetical protein N9414_04430 [Nodularia spumigena CCY9414]
 gi|119466183|gb|EAW47069.1| hypothetical protein N9414_04430 [Nodularia spumigena CCY9414]
          Length = 181

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 60/137 (43%), Gaps = 5/137 (3%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SAS 308
           R  N R+  L P+ S  G+  + +  +  + D+Y  D  + +   L     ++      S
Sbjct: 42  RSLNSRASELNPQIS--GRYIVFTSDRRGSQDVYMFDTLTRSLVDLPGLNALDTIASDPS 99

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            + +   IVF + R+G+  +++        + ++ + +A   +P  S  G  IAF   + 
Sbjct: 100 VAENGRYIVFAASRQGRSTIFLYDRETRQSRNLTNNLQAEVRNPSISADGRRIAFEYSNN 159

Query: 369 EKFAIGVMKKDGSQERL 385
            ++ + V ++ G +  +
Sbjct: 160 GQWDVLVYEQSGERLNI 176



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 10/139 (7%)

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           Y  D    +     N+    ++   S     IVF SDR G + +Y+  +       +   
Sbjct: 35  YPFDPGGRSL----NSRASELNPQIS--GRYIVFTSDRRGSQDVYMFDTLTRSLVDLPGL 88

Query: 345 K--EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPS 400
              +    DP  +  G  I F      +  I +  ++  Q R L  +   +   P+ S  
Sbjct: 89  NALDTIASDPSVAENGRYIVFAASRQGRSTIFLYDRETRQSRNLTNNLQAEVRNPSISAD 148

Query: 401 GRSLIFSRKKDGDTGSKLY 419
           GR + F    +G     +Y
Sbjct: 149 GRRIAFEYSNNGQWDVLVY 167



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 50/125 (40%), Gaps = 6/125 (4%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRA 272
             P+ S   + + + + D      VY+ DT         G     ++   P  + NG+  
Sbjct: 51  LNPQIS--GRYIVFTS-DRRGSQDVYMFDTLTRSLVDLPGLNALDTIASDPSVAENGRYI 107

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVM 331
           + +  +     I+  D ++  +  LTN L   + + S S D  +I FE    G+  + V 
Sbjct: 108 VFAASRQGRSTIFLYDRETRQSRNLTNNLQAEVRNPSISADGRRIAFEYSNNGQWDVLVY 167

Query: 332 QSNGS 336
           + +G 
Sbjct: 168 EQSGE 172



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 31/81 (38%), Gaps = 1/81 (1%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D I  +P  + N + + +A         ++L D    ++     N ++ +  P  S++G+
Sbjct: 92  DTIASDPSVAENGRYIVFAASRQGRS-TIFLYDRETRQSRNLTNNLQAEVRNPSISADGR 150

Query: 271 RALISVQKDEAMDIYSVDLQS 291
           R       +   D+   +   
Sbjct: 151 RIAFEYSNNGQWDVLVYEQSG 171


>gi|298377698|ref|ZP_06987649.1| cytochrome c binding protein [Bacteroides sp. 3_1_19]
 gi|298265401|gb|EFI07063.1| cytochrome c binding protein [Bacteroides sp. 3_1_19]
          Length = 488

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 83/265 (31%), Gaps = 58/265 (21%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             T         P + P  + +AY+T +            + +R          ++  P 
Sbjct: 209 TKTDQTIAACVYPYWHPGGEYIAYSTNNTRQSF----HTVKDERVEVLDLESDIVVYHPA 264

Query: 265 FSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--- 320
              + +  L  S+QK +                           ++SPD   + F S   
Sbjct: 265 ---DHRLLLCDSLQKKDRF---------------------ETFPAFSPDGRTLYFCSAEA 300

Query: 321 ------DREGKEQLYVMQSN---GSDQKRISQDKEA-----SYFDPVWSPQGDLIAFTKF 366
                  +E +  L  +  +   G+   RI     A     S   P  S  G  I FT  
Sbjct: 301 KKIPEEYKEIRYNLCSIDFDPSAGTFGSRIDTLVNAEALGKSVSFPRPSYDGKYIMFTLS 360

Query: 367 SGEKFAIG-------VMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGS 416
               F+I        ++       R L E ++    +   WS + R  +FS ++     +
Sbjct: 361 DYGNFSIWHKEANLWLLDLTSGDLRELSEVNSDDTESFHNWSSNSRWFVFSSRRGDGLYT 420

Query: 417 KLY--SIDLNGRNETLINTPAYASD 439
           +LY  S+D NG+       P    +
Sbjct: 421 RLYLASMDENGKISKPFLLPQEDPE 445



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 63/186 (33%), Gaps = 35/186 (18%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGN- 255
              +D+    P FSP+ + + + + + + I   Y            D        RI   
Sbjct: 274 LQKKDRFETFPAFSPDGRTLYFCSAEAKKIPEEYKEIRYNLCSIDFDPSAGTFGSRIDTL 333

Query: 256 -----FRSMILAPRFSSNGKRALISVQKDEAMDI-------YSVDLQSNATERLTNTLFI 303
                    +  PR S +GK  + ++       I       + +DL S     L+     
Sbjct: 334 VNAEALGKSVSFPRPSYDGKYIMFTLSDYGNFSIWHKEANLWLLDLTSGDLRELSEVNSD 393

Query: 304 NIS--ASYSPDSSQIVFESDREGK--EQLYV--MQSNGSDQKRIS---QDKEASYFDPVW 354
           +     ++S +S   VF S R      +LY+  M  NG   K      +D E  Y   V+
Sbjct: 394 DTESFHNWSSNSRWFVFSSRRGDGLYTRLYLASMDENGKISKPFLLPQEDPETYYDRSVY 453

Query: 355 S---PQ 357
           S   P 
Sbjct: 454 SYNVPD 459


>gi|262384841|ref|ZP_06077973.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262293557|gb|EEY81493.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 488

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 83/265 (31%), Gaps = 58/265 (21%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             T         P + P  + +AY+T +            + +R          ++  P 
Sbjct: 209 TKTDQTIAACVYPYWHPGGEYIAYSTNNTRQSF----HTVKDERVEVLDLESDIVVYHPA 264

Query: 265 FSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--- 320
              + +  L  S+QK +                           ++SPD   + F S   
Sbjct: 265 ---DHRLLLCDSLQKKDRF---------------------ETFPAFSPDGRTLYFCSAEA 300

Query: 321 ------DREGKEQLYVMQSN---GSDQKRISQDKEA-----SYFDPVWSPQGDLIAFTKF 366
                  +E +  L  +  +   G+   RI     A     S   P  S  G  I FT  
Sbjct: 301 KKIPEEYKEIRYNLCSIDFDPSAGTFGSRIDTLVNAEALGKSVSFPRPSYDGKYIMFTLS 360

Query: 367 SGEKFAIG-------VMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGS 416
               F+I        ++       R L E ++    +   WS + R  +FS ++     +
Sbjct: 361 DYGNFSIWHKEANLWLLDLTSGDLRELSEVNSDDTESFHNWSSNSRWFVFSSRRGDGLYT 420

Query: 417 KLY--SIDLNGRNETLINTPAYASD 439
           +LY  S+D NG+       P    +
Sbjct: 421 RLYLASMDENGKISKPFLLPQEDPE 445



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 63/186 (33%), Gaps = 35/186 (18%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGN- 255
              +D+    P FSP+ + + + + + + I   Y            D        RI   
Sbjct: 274 LQKKDRFETFPAFSPDGRTLYFCSAEAKKIPEEYKEIRYNLCSIDFDPSAGTFGSRIDTL 333

Query: 256 -----FRSMILAPRFSSNGKRALISVQKDEAMDI-------YSVDLQSNATERLTNTLFI 303
                    +  PR S +GK  + ++       I       + +DL S     L+     
Sbjct: 334 VNAEALGKSVSFPRPSYDGKYIMFTLSDYGNFSIWHKEANLWLLDLTSGDLRELSEVNSD 393

Query: 304 NIS--ASYSPDSSQIVFESDREGK--EQLYV--MQSNGSDQKRIS---QDKEASYFDPVW 354
           +     ++S +S   VF S R      +LY+  M  NG   K      +D E  Y   V+
Sbjct: 394 DTESFHNWSSNSRWFVFSSRRGDGLYTRLYLASMDENGKISKPFLLPQEDPETYYDRSVY 453

Query: 355 S---PQ 357
           S   P 
Sbjct: 454 SYNVPD 459


>gi|256842252|ref|ZP_05547756.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256736136|gb|EEU49466.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 488

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 83/265 (31%), Gaps = 58/265 (21%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             T         P + P  + +AY+T +            + +R          ++  P 
Sbjct: 209 TKTDQTIAACVYPYWHPGGEYIAYSTNNTRQSF----HTVKDERVEVLDLESDIVVYHPA 264

Query: 265 FSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--- 320
              + +  L  S+QK +                           ++SPD   + F S   
Sbjct: 265 ---DHRLLLCDSLQKKDRF---------------------ETFPAFSPDGRTLYFCSAEA 300

Query: 321 ------DREGKEQLYVMQSN---GSDQKRISQDKEA-----SYFDPVWSPQGDLIAFTKF 366
                  +E +  L  +  +   G+   RI     A     S   P  S  G  I FT  
Sbjct: 301 KKIPEEYKEIRYNLCSIDFDPSAGTFGSRIDTLVNAEALGKSVSFPRPSYDGKYIMFTLS 360

Query: 367 SGEKFAIG-------VMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGS 416
               F+I        ++       R L E ++    +   WS + R  +FS ++     +
Sbjct: 361 DYGNFSIWHKEANLWLLDLTSGDLRELSEVNSDDTESFHNWSSNSRWFVFSSRRGDGLYT 420

Query: 417 KLY--SIDLNGRNETLINTPAYASD 439
           +LY  S+D NG+       P    +
Sbjct: 421 RLYLASMDENGKISKPFLLPKEDPE 445



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 58/178 (32%), Gaps = 29/178 (16%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGN- 255
              +D+    P FSP+ + + + + + + I   Y            D        RI   
Sbjct: 274 LQKKDRFETFPAFSPDGRTLYFCSAEAKKIPEEYKEIRYNLCSIDFDPSAGTFGSRIDTL 333

Query: 256 -----FRSMILAPRFSSNGKRALISVQKDEAMDI-------YSVDLQSNATERLTNTLFI 303
                    +  PR S +GK  + ++       I       + +DL S     L+     
Sbjct: 334 VNAEALGKSVSFPRPSYDGKYIMFTLSDYGNFSIWHKEANLWLLDLTSGDLRELSEVNSD 393

Query: 304 NIS--ASYSPDSSQIVFESDREGK--EQLYV--MQSNGSDQKRISQDKEASYFDPVWS 355
           +     ++S +S   VF S R      +LY+  M  NG   K     KE        S
Sbjct: 394 DTESFHNWSSNSRWFVFSSRRGDGLYTRLYLASMDENGKISKPFLLPKEDPETYYDRS 451


>gi|298251971|ref|ZP_06975774.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297546563|gb|EFH80431.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 489

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 20/226 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
              +   +F    SP+ + VA           V + D    +           I A  +S
Sbjct: 164 YRGQSIDIFAAALSPDGKYVA----SGGADKTVQVWDAHSAQLLYTYRGHTEFIQAIAWS 219

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREG 324
            + K    S  +D+ + ++S +        LT   + +I  S ++SPD   IV       
Sbjct: 220 PDSKYIA-SGGQDKTVHVWSAEPGKMGQRVLTYRESPWIISSIAWSPDGQYIVSADTAST 278

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           K ++ + ++   ++       +       WSPQG+ IA    +G    + ++     Q+ 
Sbjct: 279 KTEVQIWRALTGERITTYTGHQDGVLSVAWSPQGNRIA---TAGNDGMVQILDALSGQQV 335

Query: 385 LLVE-------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +        S + + +WSP  + +       GD    ++ +D 
Sbjct: 336 ARFQYPLDNGKPSFVTSVSWSPDSKRVA---SAGGDGYVHIWDVDA 378



 Score = 76.6 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 46/301 (15%), Positives = 98/301 (32%), Gaps = 55/301 (18%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG    ++ V D   A + Y      + +    +SP+ + +A           V++  
Sbjct: 183 VASGGADKTVQVWDAHSAQLLYTYRGHTEFIQAIAWSPDSKYIA----SGGQDKTVHVWS 238

Query: 244 TRIDRAPKRIGNFRS---MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
               +  +R+  +R    +I +  +S +G+  + +       ++      +   ER+T  
Sbjct: 239 AEPGKMGQRVLTYRESPWIISSIAWSPDGQYIVSADTASTKTEVQIWRALTG--ERITTY 296

Query: 301 LFINI---SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR----ISQDKEASYFDPV 353
                   S ++SP  ++I   +  +G  Q+ +   +G    R    +   K +      
Sbjct: 297 TGHQDGVLSVAWSPQGNRIA-TAGNDGMVQI-LDALSGQQVARFQYPLDNGKPSFVTSVS 354

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE------------------------D 389
           WSP    +A    +G    + +   D  +E L                            
Sbjct: 355 WSPDSKRVA---SAGGDGYVHIWDVDAGREVLKTNVHLSYKEDFEDRLRPENHKGVKPPP 411

Query: 390 SNLQAPTWSPSGRSLIFSRKKD-------GDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
              +A +WS  G+ ++ +  +         D    LY+   +GR           +   W
Sbjct: 412 VTTRAVSWSHDGKRIVSADNRGATLVWDANDGHLLLYT---DGREAPPGRVYTSVTQAAW 468

Query: 443 V 443
            
Sbjct: 469 S 469


>gi|172035990|ref|YP_001802491.1| hypothetical protein cce_1075 [Cyanothece sp. ATCC 51142]
 gi|171697444|gb|ACB50425.1| hypothetical protein cce_1075 [Cyanothece sp. ATCC 51142]
          Length = 1062

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 70/231 (30%), Gaps = 23/231 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           GA  +         +     SP+   +A  ++D      + L + +       +      
Sbjct: 77  GAREKNCCFGHQDKVSTVAVSPDGTMIASGSWDG----TICLWNPQGQLLIDPLSGHGEK 132

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVF 318
           +    FS +G+   IS   D    ++  +    A    +        + + SP     + 
Sbjct: 133 VTTLAFSPDGQYL-ISGSSDRTFILW--NRHGQAVTHPIEGHDAGITALACSPQGDYFIT 189

Query: 319 -ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             SDR     L +    G   K      +        SP G  I  + +      I +  
Sbjct: 190 GSSDRS----LKMWNFQGEPLKPPFWGHDGEITSIAISPDGQTIVSSSWDKT---IRLWN 242

Query: 378 KDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +G +    +      +++  +SP G   I      G     +   +L G+
Sbjct: 243 LEGKEIIDPITTHQQRIESVAFSPDGHYFI-----SGSWDKTIRLWNLEGK 288



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 76/226 (33%), Gaps = 22/226 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    SL + +  G  ++      D  +     SP+ Q +  +++D      + L +  
Sbjct: 189 TGSSDRSLKMWNFQGEPLKPPFWGHDGEITSIAISPDGQTIVSSSWDK----TIRLWNLE 244

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFIN 304
                  I   +  I +  FS +G    IS   D+ + ++  +L+       +       
Sbjct: 245 GKEIIDPITTHQQRIESVAFSPDGHY-FISGSWDKTIRLW--NLEGKEMGPPIEGHEDYV 301

Query: 305 ISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +  + SPD   I    SDR     + +    G          + S  D  ++P G  +  
Sbjct: 302 LCVAISPDGEMIASGSSDRT----IRLQNRYGQMIYAPFLGHQGSIRDIAFTPDGKTLIS 357

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRSLI 405
                    +     +G  +RL     +     W    SP G+ LI
Sbjct: 358 GSSDQ---EVRFWDIEG--QRLFKGTQSEYCAVWAVGMSPDGQRLI 398



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 84/261 (32%), Gaps = 50/261 (19%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI--------- 236
           SG    ++C+ +  G  +        + +    FSP+ Q +   + D   I         
Sbjct: 105 SGSWDGTICLWNPQGQLLIDPLSGHGEKVTTLAFSPDGQYLISGSSDRTFILWNRHGQAV 164

Query: 237 -----------------LRVYLMDTRIDRAPKRIGNFRSMILAPRF------------SS 267
                             +     T       ++ NF+   L P F            S 
Sbjct: 165 THPIEGHDAGITALACSPQGDYFITGSSDRSLKMWNFQGEPLKPPFWGHDGEITSIAISP 224

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +G+  + S   D+ + ++  +L+       +T       S ++SPD     F S     +
Sbjct: 225 DGQTIV-SSSWDKTIRLW--NLEGKEIIDPITTHQQRIESVAFSPDGHY--FISG-SWDK 278

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL- 385
            + +    G +     +  E        SP G++IA          I +  + G      
Sbjct: 279 TIRLWNLEGKEMGPPIEGHEDYVLCVAISPDGEMIASGSSDRT---IRLQNRYGQMIYAP 335

Query: 386 -LVEDSNLQAPTWSPSGRSLI 405
            L    +++   ++P G++LI
Sbjct: 336 FLGHQGSIRDIAFTPDGKTLI 356



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 85/283 (30%), Gaps = 59/283 (20%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++VS     ++ + + +G  I     +  Q +    FSP+       ++D      + L
Sbjct: 227 QTIVSSSWDKTIRLWNLEGKEIIDPITTHQQRIESVAFSPDGHYFISGSWDK----TIRL 282

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---------------------------- 273
            +         I      +L    S +G+                               
Sbjct: 283 WNLEGKEMGPPIEGHEDYVLCVAISPDGEMIASGSSDRTIRLQNRYGQMIYAPFLGHQGS 342

Query: 274 -------------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFE 319
                        IS   D+ +  +  D++     + T + +  + A   SPD  +++  
Sbjct: 343 IRDIAFTPDGKTLISGSSDQEVRFW--DIEGQRLFKGTQSEYCAVWAVGMSPDGQRLI-- 398

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               G   +      G       Q          +SPQGD      +      I +   +
Sbjct: 399 -SNWGNGSIRFWNLGGKPISNPIQAHNGDVTCIAYSPQGDSFVTGSWDET---IRLWTGE 454

Query: 380 GSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           G     L    D ++    + P G  L+ +  +DG    KL++
Sbjct: 455 GKPLTELIKAHDGDVTCLAYHPQGNYLV-TGGQDGRV--KLWT 494



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 114/326 (34%), Gaps = 54/326 (16%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKK--------FFSSPASWRKIAHTISDDIYQS 165
           G+ +  G     V F  WD++ ++   G +           SP   R I++  +  I   
Sbjct: 352 GKTLISGSSDQEVRF--WDIEGQRLFKGTQSEYCAVWAVGMSPDGQRLISNWGNGSIRFW 409

Query: 166 ITGEKGDFN---------SRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
             G K   N         + I +  +  S V+G    ++ +   +G  +  L  + D  +
Sbjct: 410 NLGGKPISNPIQAHNGDVTCIAYSPQGDSFVTGSWDETIRLWTGEGKPLTELIKAHDGDV 469

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               + P    +           RV L  ++     +  G     I +  F+ +G++ + 
Sbjct: 470 TCLAYHPQGNYLV----TGGQDGRVKLWTSQGQFCQQ--GQMEDEITSVLFTPDGQKVMA 523

Query: 275 SVQKDE---------------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S  + +               +  + ++ +  +   ++T+        + SP  + +V  
Sbjct: 524 SDARGQIWHFDFPQCEQWPEESQWLGTM-ISKSNQGKITD-------LAMSPQGNILV-S 574

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
              +G   L         Q+ I    +AS     +SP G ++A +  S     +  ++ +
Sbjct: 575 GHEQGN--LCFWDLKNVTQRPILACHDASITKIAFSPNGQIVA-SGGSDGNLRLWTVQGE 631

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
                   ++S +    +SP G+ LI
Sbjct: 632 SLSYPQPHQNSEVTCIEFSPDGQQLI 657



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG  + +LC  D      R +    D  + +  FSPN Q VA  +   +  LR++ +  
Sbjct: 573 VSGHEQGNLCFWDLKNVTQRPILACHDASITKIAFSPNGQIVA--SGGSDGNLRLWTVQG 630

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
                P+   +  S +    FS +G++  IS   D  + I
Sbjct: 631 ESLSYPQP--HQNSEVTCIEFSPDGQQL-ISGYLDGTLKI 667


>gi|298248116|ref|ZP_06971921.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297550775|gb|EFH84641.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 351

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 82/251 (32%), Gaps = 28/251 (11%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
             R   + +  +SP+ + +A+A     D   +       +          S      +S 
Sbjct: 54  NHRASSIMDIDWSPDSRHLAFAY----DGTIIVWGGNTEEGPLAEYREHPSTFNVDVWSP 109

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNT-----LFINISASYSPDSSQIVFESDR 322
           + +        + A+ ++  +   +                  S  +SPD + +V  SD 
Sbjct: 110 DHQHLAFICASNGAIKVWEANTGKDPLVVYRGHLQAVRYGHVCSLDWSPDGAFLV-SSDY 168

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G  Q++   +   +    +           WSP G LIA T       ++ V +  G  
Sbjct: 169 NGTVQIW--DARSGEGPLQTFAGGGYSLSVAWSPHGRLIATTCVD---CSVRVYEAMGRS 223

Query: 383 ERLLVEDSN------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT--- 433
             L+V   +      + A +WSP  R L        D   +++   + G    L +T   
Sbjct: 224 SPLVVYWGHVTGIEGVNAASWSPDSRFLA---TAGNDATVQVWEATV-GDPPLLTHTGQR 279

Query: 434 PAYASDPQWVG 444
            ++ S   W  
Sbjct: 280 GSFLSFTSWSP 290



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 59/194 (30%), Gaps = 13/194 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+   +A  + D    + ++   T          +  S I+   +S + +    +  
Sbjct: 20  SWSPDGTFLA--SGDYRGRVHIWNARTGEGSLVTYRNHRASSIMDIDWSPDSRHLAFAY- 76

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++  + +                  +SPD   + F     G   + V ++N   
Sbjct: 77  -DGTIIVWGGNTEEGPLAEYREHPSTFNVDVWSPDHQHLAFICASNGA--IKVWEANTGK 133

Query: 338 QKRISQDK------EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              +                  WSP G  +  + ++G    I   +      +       
Sbjct: 134 DPLVVYRGHLQAVRYGHVCSLDWSPDGAFLVSSDYNGTV-QIWDARSGEGPLQTFAGGGY 192

Query: 392 LQAPTWSPSGRSLI 405
             +  WSP GR + 
Sbjct: 193 SLSVAWSPHGRLIA 206



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 66/197 (33%), Gaps = 12/197 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+   +  + Y+      V + D R    P +        L+  +S +G+    +   
Sbjct: 156 WSPDGAFLVSSDYNG----TVQIWDARSGEGPLQTFAGGGYSLSVAWSPHGRLIATTCVD 211

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                  ++   S       +   I    +AS+SPDS    F +       + V ++   
Sbjct: 212 CSVRVYEAMGRSSPLVVYWGHVTGIEGVNAASWSPDSR---FLATAGNDATVQVWEATVG 268

Query: 337 DQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           D   ++   +   F     WSP G  IA    S     I    + G    +      + A
Sbjct: 269 DPPLLTHTGQRGSFLSFTSWSPDGRFIASGGHSSVPIHIW-NARTGQVYAIFKNPPFVSA 327

Query: 395 PTWSPSGRSLIFSRKKD 411
             WSP  R +   R K 
Sbjct: 328 LAWSPESRRIAIGRGKG 344



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 74/209 (35%), Gaps = 22/209 (10%)

Query: 249 APKRIGNFRSM----ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            PK +  +R      I A  +S +G     S      + I++      +     N    +
Sbjct: 1   MPKDLFAYRGHCGAGISAISWSPDGTFLA-SGDYRGRVHIWNARTGEGSLVTYRNHRASS 59

Query: 305 -ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +   +SPDS  + F  D  G   ++   +         ++  +++   VWSP    +AF
Sbjct: 60  IMDIDWSPDSRHLAFAYD--GTIIVWGGNTEEGPLAE-YREHPSTFNVDVWSPDHQHLAF 116

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--------WSPSGRSLIFSRKKDGDTG 415
              S    AI V + +  ++ L+V   +LQA          WSP G  L+ S   +G   
Sbjct: 117 ICASNG--AIKVWEANTGKDPLVVYRGHLQAVRYGHVCSLDWSPDGAFLV-SSDYNGTV- 172

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVG 444
            +++                Y+    W  
Sbjct: 173 -QIWDARSGEGPLQTFAGGGYSLSVAWSP 200


>gi|148272861|ref|YP_001222422.1| hypothetical protein CMM_1679 [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147830791|emb|CAN01731.1| conserved hypothetical protein [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
          Length = 695

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 55/149 (36%), Gaps = 12/149 (8%)

Query: 263 PRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P  S +G+ A++SV +           ++ V    +A  R     F + +   SPD S I
Sbjct: 15  PAVSPDGRLAVVSVTRPRVHADAYTGQLWEVTTDGSAPPRRITRGFRDTAPRLSPDGSVI 74

Query: 317 VF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-- 373
            F  ++ +G  QL+V++S G +   ++ +         WSP G  I +     E      
Sbjct: 75  AFLRAEPKGPPQLHVVRSTGGEPVALTDELLG-VGAFDWSPDGSRIVYASRVAEPGRYGS 133

Query: 374 --GVMKKDGSQERLLVEDSNLQAPTWSPS 400
             GV        R+           WS  
Sbjct: 134 VEGVSAAAEPARRIATTKYLANGLGWSTD 162



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 83/266 (31%), Gaps = 46/266 (17%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDIL------RVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           +  P  SP+  ++A  +     +       +++ + T     P+RI        APR S 
Sbjct: 12  VSRPAVSPDG-RLAVVSVTRPRVHADAYTGQLWEVTTDGSAPPRRITRGFR-DTAPRLSP 69

Query: 268 NGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DRE 323
           +G        +      ++ V         LT+ L    +  +SPD S+IV+ S   +  
Sbjct: 70  DGSVIAFLRAEPKGPPQLHVVRSTGGEPVALTDELLGVGAFDWSPDGSRIVYASRVAEPG 129

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGV---- 375
               +  + +     +RI+  K        WS       F         E F   V    
Sbjct: 130 RYGSVEGVSAAAEPARRIATTK-YLANGLGWSTDRHTQLFLVDLPALDAEPFVAAVPSGY 188

Query: 376 -------MKKDGSQ--------------ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                  ++ DG                 RL  E  +  AP +S  G  ++F   +    
Sbjct: 189 TDAADPAVRGDGVDAKPSAAERAGVPPVVRLTDEPVDHDAPRFSADGSEVLFVASRHDGR 248

Query: 415 GSKLYSIDLNGRNETLINTPAYASDP 440
              L    L+G     +     AS  
Sbjct: 249 DDDL----LSGAYAVAVPARGDASSG 270



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 27/105 (25%), Gaps = 7/105 (6%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQE-RLLVEDSNLQAPTWSP 399
            S   P  SP G L   +              +  +  DGS   R +       AP  SP
Sbjct: 10  TSVSRPAVSPDGRLAVVSVTRPRVHADAYTGQLWEVTTDGSAPPRRITRGFRDTAPRLSP 69

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            G  + F R +              G    L +         W  
Sbjct: 70  DGSVIAFLRAEPKGPPQLHVVRSTGGEPVALTDELLGVGAFDWSP 114


>gi|291570849|dbj|BAI93121.1| serine/threonine protein kinase with WD-40 repeats [Arthrospira
           platensis NIES-39]
          Length = 680

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 87/249 (34%), Gaps = 20/249 (8%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG    S+ ++D D   +       +Q +     +P  + +A           + + D
Sbjct: 406 VASGQTDGSINLVDIDTGTVVNTLSGHNQPVGTIAIAPEGRFLA----SAGGDGTIRIWD 461

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R  + +   RS + A  FS +G     S   D ++ ++  ++ +   ER       
Sbjct: 462 LWNSRLVRVLPGHRSWVHALAFSPDGASLA-SAGGDGSIRLW--NVDTGFEERTLRGYGE 518

Query: 304 NISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            I A  +S +   ++  S       L +        +R       + +    SP G  +A
Sbjct: 519 QIQAIVFSANGEMLISGSS---NGLLELWDRETGQLRRSLAAHPQAIWSLAVSPDGQTLA 575

Query: 363 FTKFSGEKFAIGVMKK-----DGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGS 416
              +        + +           + L    + +Q+ ++SP G++L      D D   
Sbjct: 576 TGSWDRTVRLWDLNRLELEYFTSLPLQTLTGHGDKIQSLSFSPDGQTLA---SGDFDGTI 632

Query: 417 KLYSIDLNG 425
           KL+ I+  G
Sbjct: 633 KLWPIEPGG 641


>gi|150006736|ref|YP_001301479.1| hypothetical protein BDI_0062 [Parabacteroides distasonis ATCC
           8503]
 gi|149935160|gb|ABR41857.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 488

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 77/264 (29%), Gaps = 56/264 (21%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL------RVYLMDTRIDRAPKRIGNF-- 256
             T         P + P  + +AY+T +           RV ++D   D       +   
Sbjct: 209 TKTDQTIAACVYPYWHPGGEYIAYSTNNTRQSFHTVKDERVEVLDLESDVVVYHPADHHL 268

Query: 257 ---------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                          P FS +G+            +   +  +        N   I+   
Sbjct: 269 LLCDSLQKKDRFETFPAFSPDGRTLYFCS-----AEAKKIPEEYKEIRY--NLCSIDFDP 321

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S     S+I         + L   ++ G                P  S  G  I FT   
Sbjct: 322 STGTFGSRI---------DTLVNAEALGKSV-----------SFPRPSYDGKYIMFTLSD 361

Query: 368 GEKFAI-------GVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSK 417
              F+I        ++       R L E ++    +   WS + R  +FS ++     ++
Sbjct: 362 YGNFSIWHKEANLWLLDLTSGDLRELSEVNSDDTESFHNWSSNSRWFVFSSRRGDGLYTR 421

Query: 418 LY--SIDLNGRNETLINTPAYASD 439
           LY  S+D NG+       P    +
Sbjct: 422 LYLASMDENGKISKPFLLPQEDPE 445



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 63/186 (33%), Gaps = 35/186 (18%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGN- 255
              +D+    P FSP+ + + + + + + I   Y            D        RI   
Sbjct: 274 LQKKDRFETFPAFSPDGRTLYFCSAEAKKIPEEYKEIRYNLCSIDFDPSTGTFGSRIDTL 333

Query: 256 -----FRSMILAPRFSSNGKRALISVQKDEAMDI-------YSVDLQSNATERLTNTLFI 303
                    +  PR S +GK  + ++       I       + +DL S     L+     
Sbjct: 334 VNAEALGKSVSFPRPSYDGKYIMFTLSDYGNFSIWHKEANLWLLDLTSGDLRELSEVNSD 393

Query: 304 NIS--ASYSPDSSQIVFESDREGK--EQLYV--MQSNGSDQKRIS---QDKEASYFDPVW 354
           +     ++S +S   VF S R      +LY+  M  NG   K      +D E  Y   V+
Sbjct: 394 DTESFHNWSSNSRWFVFSSRRGDGLYTRLYLASMDENGKISKPFLLPQEDPETYYDRSVY 453

Query: 355 S---PQ 357
           S   P 
Sbjct: 454 SYNVPD 459


>gi|145482657|ref|XP_001427351.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394431|emb|CAK59953.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1084

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 54/299 (18%), Positives = 111/299 (37%), Gaps = 33/299 (11%)

Query: 127 EFRLWDVKDRKQIIG--------KKFFSSPASW------RKIAHTISDDIYQSITGEKGD 172
             R+WDVK   Q           K    SP         R     I D +    T ++  
Sbjct: 363 SIRIWDVKAGLQKAKLDGHTNSIKSISFSPDGTTLVSGSRDKCIRIWDVMMTQYTTKQEG 422

Query: 173 FNSRILFV-----SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            +  +  +       ++ SG    S+C+ D +  +++         +    FSP+   +A
Sbjct: 423 HSDAVQSICFSHDGITLASGSKDKSICIWDVNSGSLKKKLNGHTNSVKSVCFSPDGITLA 482

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D      + + D +      ++    + + +   S +G   L S  KD+++ I+  
Sbjct: 483 SGSKD----CSIRIWDVKAGNQIAKLEGHTNSVKSVCLSYDGT-ILASGSKDKSIHIW-- 535

Query: 288 DLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D+++   +   +    ++ S  +S D   +   S   G + + +        K   +D  
Sbjct: 536 DVKTGNRKFKLDGHANSVKSVCFSIDGITLASGS---GDKSIRLWDFKMGYLKAKLEDHA 592

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +S     +SP G  +A      +  +IG+ +    Q+  L   S  +  ++SP+GR L 
Sbjct: 593 SSIQSVCFSPDGTKLASVS---KDHSIGMWEAKRGQKIFLRSYSGFKFISFSPNGRILA 648



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 99/307 (32%), Gaps = 40/307 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                  L    R ++VK+  Q +               H  SD++        G     
Sbjct: 687 TTLASGSLDGSIRFYEVKNEFQSVKLD-----------GH--SDNVNTICFSPDGTLL-- 731

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                    SG    S+C+ D +  + +    +    +    FSPN   +A  + D    
Sbjct: 732 --------ASGSDDRSICLWDVNTGDQKVKFKNHTNDVCTVCFSPNGHTIASGSDDK--- 780

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L D + ++   ++      I +  FS++G     S   D+++ ++ V  +     +
Sbjct: 781 -SIRLYDIQTEQQTAKLDGHTKAICSVCFSNSGCTLA-SGSYDKSIRLWDV-KRGQQKIK 837

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L       +S ++SPD + +   S       + +       QK   +          +SP
Sbjct: 838 LEGHSGAVMSVNFSPDDTTLASGS---ADWSILLWDVKTGQQKAKLKGHSNYVMSVCFSP 894

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  +A          I +      Q   RL    + + +  + P G  L        D 
Sbjct: 895 DGTELASGSHDKS---ICLWDVRTGQLKDRLGGHINYVMSVCYFPDGTKLA---SGSADN 948

Query: 415 GSKLYSI 421
             +L+ +
Sbjct: 949 SIRLWDV 955



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 98/291 (33%), Gaps = 39/291 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS-----WRKIAHTISD-------- 160
            G ++  G D   +   LWDV    Q +  KF +         +    HTI+         
Sbjct: 728  GTLLASGSDDRSIC--LWDVNTGDQKV--KFKNHTNDVCTVCFSPNGHTIASGSDDKSIR 783

Query: 161  --DIYQSITGEKGDFNSRILFVSE------SVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
              DI       K D +++ +          ++ SG    S+ + D      +        
Sbjct: 784  LYDIQTEQQTAKLDGHTKAICSVCFSNSGCTLASGSYDKSIRLWDVKRGQQKIKLEGHSG 843

Query: 213  ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             +    FSP+   +A  + D      + L D +  +   ++    + +++  FS +G   
Sbjct: 844  AVMSVNFSPDDTTLASGSAD----WSILLWDVKTGQQKAKLKGHSNYVMSVCFSPDGTEL 899

Query: 273  LISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S   D+++ ++  D+++   + RL   +   +S  Y PD +++   S       + + 
Sbjct: 900  A-SGSHDKSICLW--DVRTGQLKDRLGGHINYVMSVCYFPDGTKLASGS---ADNSIRLW 953

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                  QK              +S  G  +A         +I +      Q
Sbjct: 954  DVRTGCQKVKFNGHTNGILSVCFSLDGTTLA---SGSNDHSIRLWNIQTGQ 1001



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 89/244 (36%), Gaps = 19/244 (7%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            + ++ SG    S+ + D      +         +    FSP+   +   + D      +
Sbjct: 351 PNNTLASGSKDKSIRIWDVKAGLQKAKLDGHTNSIKSISFSPDGTTLVSGSRDK----CI 406

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D  + +   +       + +  FS +G     S  KD+++ I+  D+ S + ++  N
Sbjct: 407 RIWDVMMTQYTTKQEGHSDAVQSICFSHDGITLA-SGSKDKSICIW--DVNSGSLKKKLN 463

Query: 300 TLFINI-SASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSP 356
               ++ S  +SPD   +       G +   + +      +Q    +    S      S 
Sbjct: 464 GHTNSVKSVCFSPDGITLA-----SGSKDCSIRIWDVKAGNQIAKLEGHTNSVKSVCLSY 518

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G ++A +    +   I  +K    + +L    +++++  +S  G +L       GD   
Sbjct: 519 DGTILA-SGSKDKSIHIWDVKTGNRKFKLDGHANSVKSVCFSIDGITLA---SGSGDKSI 574

Query: 417 KLYS 420
           +L+ 
Sbjct: 575 RLWD 578



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 83/214 (38%), Gaps = 21/214 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+   +A++     D+  VY+ D +     K++  +  ++ +  FS +G    I++  
Sbjct: 143 FSPDGTTLAFS-----DLEYVYIWDIKKGE--KKVKLYGYLVKSICFSPDG----ITLAS 191

Query: 279 DEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGS 336
                I   D+Q+     +L   +    S  +SPD   +V      GK+  + +      
Sbjct: 192 CSRGSICIWDVQTGYQKTKLDGHMNSVKSVCFSPDGITLV----SGGKDCSIRIWDFKAG 247

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            QK   +    S      S  G ++A +    +   I  ++    + +L     ++++ +
Sbjct: 248 KQKAKLKGHTNSVKSVCLSYDGTILA-SGSKDKSIHIWDVRTGYKKFKLDGHADSVESVS 306

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +S  G +L        D   +++ +    +   L
Sbjct: 307 FSRDGITLA---SGSKDCSIRIWDVKTGYQKAKL 337



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 87/235 (37%), Gaps = 20/235 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           + S+C+ D      +         +    FSP+   +            + + D +  + 
Sbjct: 194 RGSICIWDVQTGYQKTKLDGHMNSVKSVCFSPDGITLV----SGGKDCSIRIWDFKAGKQ 249

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-S 308
             ++    + + +   S +G   L S  KD+++ I+  D+++   +   +    ++ + S
Sbjct: 250 KAKLKGHTNSVKSVCLSYDGT-ILASGSKDKSIHIW--DVRTGYKKFKLDGHADSVESVS 306

Query: 309 YSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +S D   +       G +   + +       QK        S     +SP   L   +  
Sbjct: 307 FSRDGITLA-----SGSKDCSIRIWDVKTGYQKAKLDGHTNSVQSVRFSPNNTL--ASGS 359

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +   I  +K    + +L    +++++ ++SP G +L+   +   D   +++ +
Sbjct: 360 KDKSIRIWDVKAGLQKAKLDGHTNSIKSISFSPDGTTLVSGSR---DKCIRIWDV 411



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 90/296 (30%), Gaps = 35/296 (11%)

Query: 131 WDVKDRKQIIGKKFFS------SPASWRKIAHTISDDIYQSI---TGEKGDFNSRILFVS 181
           W+ K  ++I  + +        SP   R +A   SD+    +   T EK           
Sbjct: 619 WEAKRGQKIFLRSYSGFKFISFSPNG-RILATGSSDNSIHLLNTKTLEKVAKLDGHTNSV 677

Query: 182 ESVVSGIIKNSLCVMDRDGANIRY---------LTPSRDQILFEPRFSPNQQKVAYATYD 232
           +SV       +L     DG+   Y                 +    FSP+   +A  + D
Sbjct: 678 KSVCFSPDSTTLASGSLDGSIRFYEVKNEFQSVKLDGHSDNVNTICFSPDGTLLASGSDD 737

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 + L D        +  N  + +    FS NG          +   I   D+Q+ 
Sbjct: 738 R----SICLWDVNTGDQKVKFKNHTNDVCTVCFSPNGHTIA---SGSDDKSIRLYDIQTE 790

Query: 293 ATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               +L        S  +S     +   S     + + +       QK   +    +   
Sbjct: 791 QQTAKLDGHTKAICSVCFSNSGCTLASGSY---DKSIRLWDVKRGQQKIKLEGHSGAVMS 847

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
             +SP    +A        ++I +      Q+  +L    + + +  +SP G  L 
Sbjct: 848 VNFSPDDTTLASGSAD---WSILLWDVKTGQQKAKLKGHSNYVMSVCFSPDGTELA 900



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 81/243 (33%), Gaps = 18/243 (7%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++VSG    S+ + D      +         +     S +   +A  + D      +++ 
Sbjct: 229 TLVSGGKDCSIRIWDFKAGKQKAKLKGHTNSVKSVCLSYDGTILASGSKDK----SIHIW 284

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTL 301
           D R      ++      + +  FS +G     S  KD ++ I+  D+++   + +L    
Sbjct: 285 DVRTGYKKFKLDGHADSVESVSFSRDGITLA-SGSKDCSIRIW--DVKTGYQKAKLDGHT 341

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S  +SP+++     +     + + +       QK        S     +SP G  +
Sbjct: 342 NSVQSVRFSPNNT----LASGSKDKSIRIWDVKAGLQKAKLDGHTNSIKSISFSPDGTTL 397

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +    +   I  +       +       +Q+  +S  G +L       G     +   
Sbjct: 398 V-SGSRDKCIRIWDVMMTQYTTKQEGHSDAVQSICFSHDGITLA-----SGSKDKSICIW 451

Query: 422 DLN 424
           D+N
Sbjct: 452 DVN 454



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 60/176 (34%), Gaps = 16/176 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G     S    +   +Y  D++    +++    ++  S  +SPD   +   S    
Sbjct: 143 FSPDGTTLAFS----DLEYVYIWDIK-KGEKKVKLYGYLVKSICFSPDGITLASCS---- 193

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +  + +       QK        S     +SP G  +  +        I   K    + +
Sbjct: 194 RGSICIWDVQTGYQKTKLDGHMNSVKSVCFSPDGITLV-SGGKDCSIRIWDFKAGKQKAK 252

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASD 439
           L    +++++   S  G  L       G     ++  D+  G  +  ++  A + +
Sbjct: 253 LKGHTNSVKSVCLSYDGTILA-----SGSKDKSIHIWDVRTGYKKFKLDGHADSVE 303


>gi|13471938|ref|NP_103505.1| transcriptional repressor [Mesorhizobium loti MAFF303099]
 gi|14022682|dbj|BAB49291.1| probable transcriptional repressor [Mesorhizobium loti MAFF303099]
          Length = 586

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 45/305 (14%), Positives = 102/305 (33%), Gaps = 46/305 (15%)

Query: 109 QVLVTGRVIKEGKDRLRVE----FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
             +V   V  +G+  +        +LWD+  ++ I   +         + A  + D +  
Sbjct: 292 DAVVWLAVAPDGRSIMSASTDRVIKLWDIGGKQLI---RNLGVHKDMARTALYMPDGVSA 348

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
              G+ G+   R L                    DGA +      ++  + +   SP+ +
Sbjct: 349 LTGGDDGEIVLRKL-------------------ADGAVLHVFQAGQNGGVNKLAISPDGK 389

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           +         D   V + D   +     +      I A   S +GK+  +S   D  + +
Sbjct: 390 RAV----SGHDTGNVIVWDLVNNSVLHVLTGHDWSISAVAVSPDGKQ-ALSGSIDGTLKL 444

Query: 285 YSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           +  D++S   ++L +          A ++ D+ +++  S   G   + V   +   + + 
Sbjct: 445 W--DIESG--KQLRSWHGHEQGTYGAVFTADAHRLITGS---GDLTIKVWDLDSGREVKR 497

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSP 399
            +  E + +    S  G  +      G      +   +   +  L +     + A  ++P
Sbjct: 498 FEGHEGTVYALALSADGKRLLSGSLDGTA---RLWDMETGNQIALFDSQTGPIYAVAFAP 554

Query: 400 SGRSL 404
            G  L
Sbjct: 555 DGTVL 559



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 72/199 (36%), Gaps = 19/199 (9%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +   +++ +   +TG     ++  +    +  +SG I  +L + D +           +Q
Sbjct: 402 VWDLVNNSVLHVLTGHDWSISAVAVSPDGKQALSGSIDGTLKLWDIESGKQLRSWHGHEQ 461

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             +   F+ +  ++   + D    L + + D    R  KR       + A   S++GKR 
Sbjct: 462 GTYGAVFTADAHRLITGSGD----LTIKVWDLDSGREVKRFEGHEGTVYALALSADGKRL 517

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQL 328
           L S   D    ++  D+++     L ++           +++PD + +    DR     +
Sbjct: 518 L-SGSLDGTARLW--DMETGNQIALFDS---QTGPIYAVAFAPDGTVLTGGYDRT----I 567

Query: 329 YVMQSNGSDQKRISQDKEA 347
               + G D   +      
Sbjct: 568 RDWPAAGGDGVVLFAGAPG 586


>gi|326437093|gb|EGD82663.1| hypothetical protein PTSG_11993 [Salpingoeca sp. ATCC 50818]
          Length = 852

 Score = 76.6 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 87/245 (35%), Gaps = 14/245 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     ++ + + D  ++          + +  F+P+ + +A ++ D+     V L  T 
Sbjct: 79  TASKDKTVRIWNTDTGSVMRTLRGHSLEVNDVSFAPDGRTIASSSTDE----SVILWVTG 134

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFIN 304
                 ++    + +LA  FS  G+R + S  +D  + I+  +  +    + LT      
Sbjct: 135 TGEMLSKLVGHSAPVLACCFSPPGRRLIASGSEDHTLIIW--NAATRRKLKALTGHRDAV 192

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               +SP   +IV  + R+    +     +   Q  + +          +SP G  +  +
Sbjct: 193 TDVKFSPLDDRIVISASRD--TTIIAWSIDNGSQLMVFRGHTDIVTGVAFSPDG-WLMAS 249

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSID 422
             +     I        +   ++      A +  +SP+G+++  +          +  + 
Sbjct: 250 TCADTTTRIW--NLQSCKCVSILHGHRQCASSCDFSPTGQTVATTSWDGSIKLWDISHVP 307

Query: 423 LNGRN 427
             GR 
Sbjct: 308 SAGRT 312



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 47/155 (30%), Gaps = 13/155 (8%)

Query: 287 VDLQSNATERLTNTLFINISAS----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +   +   ERL  T+  + + S    YS D S +   S  +  +       +     R  
Sbjct: 1   MAADTMYAERLLRTVLAHATPSLTLEYSCDGSLLASASKDKTAKVFNTANFDEVHTLR-- 58

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                      +SP+   I  T    +   I           L      +   +++P GR
Sbjct: 59  -GHHDRINGLAFSPRTRHILATASKDKTVRIWNTDTGSVMRTLRGHSLEVNDVSFAPDGR 117

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           ++  S   +         + + G  E L     ++
Sbjct: 118 TIASSSTDES------VILWVTGTGEMLSKLVGHS 146


>gi|197124076|ref|YP_002136027.1| hypothetical protein AnaeK_3686 [Anaeromyxobacter sp. K]
 gi|196173925|gb|ACG74898.1| conserved hypothetical protein [Anaeromyxobacter sp. K]
          Length = 1041

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 67/184 (36%), Gaps = 13/184 (7%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  L V   DG     +          P FS +   +A+    ++    VY++      
Sbjct: 453 KRRKLDVRPPDGRRFITIAD--------PTFSADASHLAFVGVAEDGQQDVYVVPV-TGG 503

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +R+ N         + ++G            ++++ +D  + A  RLT     +    
Sbjct: 504 VARRLTNDGYTEKDLHWGADGLYCASDATDHGRLNLFRIDPATGARTRLTTAASTDRHPY 563

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
              D S ++F SD  GK  LY+++      +R++ D       P  +P+   +    F+G
Sbjct: 564 PQADGS-VLFSSDARGKPDLYLLK--DGAIQRLT-DFTTGLTSPAVAPKARGVLAATFNG 619

Query: 369 EKFA 372
             F 
Sbjct: 620 GLFR 623



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 60/151 (39%), Gaps = 4/151 (2%)

Query: 263 PRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           P FS++        V +D   D+Y V +      RLTN  +      +  D      ++ 
Sbjct: 473 PTFSADASHLAFVGVAEDGQQDVYVVPVTGGVARRLTNDGYTEKDLHWGADGLYCASDAT 532

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G+  L+ +      + R++     +   P     G  + F+  +  K  + ++K DG+
Sbjct: 533 DHGRLNLFRIDPATGARTRLTTAAS-TDRHPYPQADGS-VLFSSDARGKPDLYLLK-DGA 589

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +RL    + L +P  +P  R ++ +    G
Sbjct: 590 IQRLTDFTTGLTSPAVAPKARGVLAATFNGG 620


>gi|149918843|ref|ZP_01907330.1| peptidase, S9C (acylaminoacyl-peptidase) subfamily protein
           [Plesiocystis pacifica SIR-1]
 gi|149820444|gb|EDM79860.1| peptidase, S9C (acylaminoacyl-peptidase) subfamily protein
           [Plesiocystis pacifica SIR-1]
          Length = 753

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 100/295 (33%), Gaps = 33/295 (11%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR---YLTPSRDQILF 215
           +D +       +GD  + ++  ++   +G  + SL +++ DGA  +    L     +   
Sbjct: 90  ADRVSSPALSPEGDRLAYMVRETDMAANGSRR-SLWLLELDGAAAKGEPILVDDHPKGSS 148

Query: 216 EPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +P +SP+   + + +       +    MD      P+++      +   + S +G    +
Sbjct: 149 QPTWSPDGAFLYFVSGRSGSSQVWRVAMDGAAAGTPQQVTQLPVGVSNLKLSPDGATLAV 208

Query: 275 SVQ----------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           S +            E +   + D  +            +    +      ++   D   
Sbjct: 209 SAELFPECEDLKCTAERLAARAADPTTGVAYDRMFVRHWDT---WKDHRRSMLLAVDATP 265

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---------GEKFAIGV 375
             Q   + + G D    S+    S  D  ++P G+ I F                F +  
Sbjct: 266 GAQTGRILTKGLDADVPSKPFGGSE-DFTFTPDGEAIVFAARDAAGGGGEPWSTNFDLFR 324

Query: 376 MKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIF-SRKKDGDTG--SKLYSIDLNG 425
              D S+   +L    +    P +SP G+ L + + ++ G      +L   D +G
Sbjct: 325 APIDASEAPTKLTTNPAWDAQPQFSPDGKQLAWLAMERPGYEADRFRLIVQDWDG 379



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 85/259 (32%), Gaps = 75/259 (28%)

Query: 260 ILAPRFSSNGKRALISVQKDE------AMDIYSVDLQS----NATERLTNTLFINISASY 309
           + +P  S  G R    V++ +         ++ ++L           + +    +   ++
Sbjct: 93  VSSPALSPEGDRLAYMVRETDMAANGSRRSLWLLELDGAAAKGEPILVDDHPKGSSQPTW 152

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFT-- 364
           SPD + + F S R G  Q++ +  +G      ++++Q       +   SP G  +A +  
Sbjct: 153 SPDGAFLYFVSGRSGSSQVWRVAMDGAAAGTPQQVTQLPVG-VSNLKLSPDGATLAVSAE 211

Query: 365 ---------------------------------------KFSGEKFAIGVMKKDGSQE-R 384
                                                  K       + V    G+Q  R
Sbjct: 212 LFPECEDLKCTAERLAARAADPTTGVAYDRMFVRHWDTWKDHRRSMLLAVDATPGAQTGR 271

Query: 385 LLVEDSNLQAPT----------WSPSGRSLIFSRKKDGDTGSKLYS---------IDLNG 425
           +L +  +   P+          ++P G +++F+ +     G + +S         ID + 
Sbjct: 272 ILTKGLDADVPSKPFGGSEDFTFTPDGEAIVFAARDAAGGGGEPWSTNFDLFRAPIDASE 331

Query: 426 RNETLINTPAYASDPQWVG 444
               L   PA+ + PQ+  
Sbjct: 332 APTKLTTNPAWDAQPQFSP 350



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 59/165 (35%), Gaps = 21/165 (12%)

Query: 264 RFSSNGKRALISVQK---------DEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDS 313
            F+ +G+  + + +              D++   +  S A  +LT     +    +SPD 
Sbjct: 293 TFTPDGEAIVFAARDAAGGGGEPWSTNFDLFRAPIDASEAPTKLTTNPAWDAQPQFSPDG 352

Query: 314 SQIVFES-DREG----KEQLYVMQSNG----SDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            Q+ + + +R G    + +L V   +G     + K ++Q+ + S     ++  GD +  T
Sbjct: 353 KQLAWLAMERPGYEADRFRLIVQDWDGSSVSGEPKAVTQEWDRSISGFTFTAAGDRVFAT 412

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   +  +          V +  + A         L++S  
Sbjct: 413 AQHLGHKPLFAIDLASGAATPRVAEGTVAALQVGAD--KLVWSSH 455



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 43/116 (37%), Gaps = 8/116 (6%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMD 243
                L     D +       +      +P+FSP+ +++A+   +      D  R+ + D
Sbjct: 317 STNFDLFRAPIDASEAPTKLTTNPAWDAQPQFSPDGKQLAWLAMERPGYEADRFRLIVQD 376

Query: 244 TR---IDRAPKRIGN-FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                +   PK +   +   I    F++ G R   + Q      ++++DL S A  
Sbjct: 377 WDGSSVSGEPKAVTQEWDRSISGFTFTAAGDRVFATAQHLGHKPLFAIDLASGAAT 432


>gi|289770518|ref|ZP_06529896.1| WD-40 repeat-containing protein [Streptomyces lividans TK24]
 gi|289700717|gb|EFD68146.1| WD-40 repeat-containing protein [Streptomyces lividans TK24]
          Length = 1297

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 95/306 (31%), Gaps = 42/306 (13%)

Query: 149  ASWRKIAHTISDD----------IYQSITGEKGDFNSRILFVSESVVSGI------IKNS 192
            A     AH +  D          I  +        ++  ++++     G          +
Sbjct: 985  AQLDLAAHRLRPDDEDVRNRLISIVNAPLATPLLGHTGAVYLTSFSPDGRILATASYDRT 1044

Query: 193  LCVMD-RDGANIRYL---TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            + + D  D    + L          +    FSP+ + +A A+ D    L       R   
Sbjct: 1045 VRLWDVSDPGRPQQLGKPLTGHTSWVSTAVFSPDGRTLASASDDGTIRLWDVTDPGRPRP 1104

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINI 305
                +      +    FS +G+    S   D A+ +++V     A E    LT +     
Sbjct: 1105 LGAPLDGHGGTVYLLAFSPDGRTLA-SAHDDHAVRLWNV-ADRRAPEALDTLTGSTGAVR 1162

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK------EASYFDPVWSPQGD 359
            S ++SPD   +       G +   V   + SD +R                   +SP G 
Sbjct: 1163 SVAFSPDGDTLA-----SGGDDDKVRLWDVSDPRRPEPAGAPLAGHSGLVHSVAFSPDGH 1217

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             +A            V    G++     L      + A  +SP G  L  S     D+ +
Sbjct: 1218 TLASGSADDTVQLWDVTDPAGAKPVGAPLTGHSGPVWAVAFSPDGAMLAVSS---ADSTA 1274

Query: 417  KLYSID 422
             L+++ 
Sbjct: 1275 SLWNVS 1280



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 77/242 (31%), Gaps = 14/242 (5%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                 ++   FSP+ + +A A+YD    L       R  +  K +    S +    FS +
Sbjct: 1019 GHTGAVYLTSFSPDGRILATASYDRTVRLWDVSDPGRPQQLGKPLTGHTSWVSTAVFSPD 1078

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGK 325
            G+    S   D  + ++ V            L          ++SPD   +    D    
Sbjct: 1079 GRTLA-SASDDGTIRLWDVTDPGRPRPLGAPLDGHGGTVYLLAFSPDGRTLASAHDDHAV 1137

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM----KKDGS 381
                V      +          +     +SP GD +A +    +K  +  +    + + +
Sbjct: 1138 RLWNVADRRAPEALDTLTGSTGAVRSVAFSPDGDTLA-SGGDDDKVRLWDVSDPRRPEPA 1196

Query: 382  QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASDP 440
               L      + +  +SP G +L        D   +L+ + D  G          ++  P
Sbjct: 1197 GAPLAGHSGLVHSVAFSPDGHTLA---SGSADDTVQLWDVTDPAGAKPVGAPLTGHSG-P 1252

Query: 441  QW 442
             W
Sbjct: 1253 VW 1254



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 12/214 (5%)

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            +P  S      A+    D++ +R  L+          +      +    FS +G R L +
Sbjct: 980  DPSLSAQLDLAAHRLRPDDEDVRNRLISIVNAPLATPLLGHTGAVYLTSFSPDG-RILAT 1038

Query: 276  VQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               D  + ++ V          + LT       +A +SPD   +   SD +G  +L+ + 
Sbjct: 1039 ASYDRTVRLWDVSDPGRPQQLGKPLTGHTSWVSTAVFSPDGRTLASASD-DGTIRLWDVT 1097

Query: 333  SNGSDQKR--ISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVE 388
              G  +           + +   +SP G  +A          + +   +   + + L   
Sbjct: 1098 DPGRPRPLGAPLDGHGGTVYLLAFSPDGRTLASAHDDHAVRLWNVADRRAPEALDTLTGS 1157

Query: 389  DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +++  +SP G +L        D   +L+ + 
Sbjct: 1158 TGAVRSVAFSPDGDTLA---SGGDDDKVRLWDVS 1188



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 73/241 (30%), Gaps = 38/241 (15%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKD-------RKQIIGKKFFSSPA----SWRKIAHTISDDI 162
            GR++           RLWDV D        K + G   + S A      R +A + SDD 
Sbjct: 1033 GRILATA--SYDRTVRLWDVSDPGRPQQLGKPLTGHTSWVSTAVFSPDGRTLA-SASDDG 1089

Query: 163  YQSITGEKGDFNSRILFVSESVVSGIIK--------NSLCVMDRDGANIRY--------- 205
               +         R L        G +          +L     D A   +         
Sbjct: 1090 TIRLWDVTDPGRPRPLGAPLDGHGGTVYLLAFSPDGRTLASAHDDHAVRLWNVADRRAPE 1149

Query: 206  ---LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                       +    FSP+   +A    DD+  L       R + A   +     ++ +
Sbjct: 1150 ALDTLTGSTGAVRSVAFSPDGDTLASGGDDDKVRLWDVSDPRRPEPAGAPLAGHSGLVHS 1209

Query: 263  PRFSSNGKRALISVQKDEAMDIY-SVDLQSNATE--RLTNTLFINISASYSPDSSQIVFE 319
              FS +G     S   D+ + ++   D          LT       + ++SPD + +   
Sbjct: 1210 VAFSPDGHTLA-SGSADDTVQLWDVTDPAGAKPVGAPLTGHSGPVWAVAFSPDGAMLAVS 1268

Query: 320  S 320
            S
Sbjct: 1269 S 1269


>gi|302547417|ref|ZP_07299759.1| WD-40 repeat protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302465035|gb|EFL28128.1| WD-40 repeat protein [Streptomyces himastatinicus ATCC 53653]
          Length = 999

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 62/371 (16%), Positives = 118/371 (31%), Gaps = 56/371 (15%)

Query: 115 RVIKEGKDRLRVE-----FRLWDVKDRKQI--IGKKFFSSPA----------SWRKIAHT 157
           RV   G D L         +LWDV+DR +   +G+   S               R++A  
Sbjct: 390 RVSPRGGDLLVATGKGGGIQLWDVRDRSRPRALGRPLVSHDEENVVSAAFAPDGRQLATG 449

Query: 158 ----------ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
                     +SD    +  GE  + +        +V      N+L     DG    +  
Sbjct: 450 GDDGTVRLWDLSDPARPAPLGEPAEADGSEERSVRAVAFAPDGNTLATGGYDGTVRMWRL 509

Query: 208 PSRDQI-------------LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
              D +             ++   FSP+   +A A +D+   L       R+    + + 
Sbjct: 510 GGGDGLAPLGKPLRQHTSSVWTVAFSPDGNTLATAGFDETVRLWDASDPGRVQPLGEPLT 569

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPD 312
              + +++  FS +G+    + + D  +              E LT         ++SPD
Sbjct: 570 AHTAPVMSVAFSPDGETLATAGEDDAPLLWNVAHPAYPQQLGEPLTGHTEAVWEVAFSPD 629

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +   +  +G  +L+           +  D         +SP G L+A          
Sbjct: 630 GHNLA-STGADGSVRLWRRPPT------VLTDFTNPLTAVAYSPDGRLLATASTDDGLIR 682

Query: 373 IGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +  +++     R+     +     A  +SP GR++        D   +L+ +        
Sbjct: 683 LWDVRRPDRPRRIPRTLGHEDAVLAVAFSPDGRTVAGGST---DGTVRLWDVSAP-ERPA 738

Query: 430 LINTPAYASDP 440
            +  P  A D 
Sbjct: 739 PLGEPLDAHDG 749



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 48/317 (15%), Positives = 111/317 (35%), Gaps = 33/317 (10%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD------FNSRILFVSESVVSGI 188
               ++  +  ++  + R       D ++  +T E           +  L V+   +   
Sbjct: 260 TGTAVVALQARATAQNERD------DAVFGRLTAEADGVRETDSGLAARLDVAAYRMRTT 313

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRID 247
                 +    G  +    P    +     ++P+ + +A   +D    +   +   +   
Sbjct: 314 PDLRTRLASDTGRVLATRLPGHRGLGSSVAYAPDGRTLASGGHDGTVRLWDTHRDRSLGA 373

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER------LTNTL 301
               R G   ++  +PR S  G   L++  K   + ++  D++  +  R      +++  
Sbjct: 374 PLRLRTGRVGAVAFSPRVSPRGGDLLVATGKGGGIQLW--DVRDRSRPRALGRPLVSHDE 431

Query: 302 FINISASYSPDSSQIVFESDREGKEQLY-----VMQSNGSDQKRISQDKEASYFDPVWSP 356
              +SA+++PD  Q+    D +G  +L+        +   +       +E S     ++P
Sbjct: 432 ENVVSAAFAPDGRQLATGGD-DGTVRLWDLSDPARPAPLGEPAEADGSEERSVRAVAFAP 490

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            G+ +A   + G      +   DG     + L    S++    +SP G +L        D
Sbjct: 491 DGNTLATGGYDGTVRMWRLGGGDGLAPLGKPLRQHTSSVWTVAFSPDGNTLA---TAGFD 547

Query: 414 TGSKLYSIDLNGRNETL 430
              +L+     GR + L
Sbjct: 548 ETVRLWDASDPGRVQPL 564



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 75/225 (33%), Gaps = 17/225 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T   +  +    FSP+ + VA  + D    L       R     + +      + A  F+
Sbjct: 698 TLGHEDAVLAVAFSPDGRTVAGGSTDGTVRLWDVSAPERPAPLGEPLDAHDGGVPAVAFA 757

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-----LTNTLFINISASYSPDSSQIVFESD 321
            +G+R   +   D  + ++  D++     R     L        S +++     +     
Sbjct: 758 PDGRRLA-TGGDDGTVRLW--DVRRRDHVRPLGATLRGHTDTVTSVAFARGGRILA-TGS 813

Query: 322 REGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            +G  +L+ + +    +         +       ++  G  +A            V + D
Sbjct: 814 EDGTARLWHVGAGERARPAGDALTGHDEQVNTVTFASDGKTLATGSDDRTVRLWDVARVD 873

Query: 380 G---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 E L    + +++  ++P G++L       GD   +L+ +
Sbjct: 874 RVRPVGEELTGHRAPVRSVAFAPDGKTLA---TGSGDHTVRLWDV 915



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 41/114 (35%), Gaps = 4/114 (3%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               D+ +    F+ + + +A  + D    L       R+    + +   R+ + +  F+
Sbjct: 836 LTGHDEQVNTVTFASDGKTLATGSDDRTVRLWDVARVDRVRPVGEELTGHRAPVRSVAFA 895

Query: 267 SNGKRALISVQKDEAMDIY-SVDLQSNAT--ERLTNTLFINISASYSPDSSQIV 317
            +GK    +   D  + ++   D        + LT  L    S ++SP    + 
Sbjct: 896 PDGKTLA-TGSGDHTVRLWDVADPAHAEVAGQELTGHLDTVTSVAFSPKGDALA 948


>gi|322830739|ref|YP_004210766.1| hypothetical protein Rahaq_0006 [Rahnella sp. Y9602]
 gi|321165940|gb|ADW71639.1| hypothetical protein Rahaq_0006 [Rahnella sp. Y9602]
          Length = 420

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 13/151 (8%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRID 247
            +      G   R +T + + I  +PR     SP+  K+A+   D+  +++V+ +     
Sbjct: 275 EMLPAPPAGVKQRRITFTENGIALQPRHWLRVSPDGAKIAFLMQDETGVVQVWTVSPNGG 334

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT----NTLFI 303
              +   +   +  A  +S +GK   +         +  +D++S   +RLT    N    
Sbjct: 335 APAQISHSESGIQSAFSWSQDGKSLALVCDNS----VMRLDMESGKMQRLTQRSENAPCA 390

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +    YSPD S++ F     G  Q+ V  S+
Sbjct: 391 DAV-VYSPDGSKVAFMRQCNGYAQICVADSD 420



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 58/155 (37%), Gaps = 16/155 (10%)

Query: 280 EAMDIYSVDLQSNATERLTNTL-FINISAS----YSPDSSQIVFES-DREGKEQLYVMQS 333
              ++           R+T T   I +        SPD ++I F   D  G  Q++ +  
Sbjct: 272 GTPEMLPAPPAGVKQRRITFTENGIALQPRHWLRVSPDGAKIAFLMQDETGVVQVWTVSP 331

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL- 392
           NG    +IS  +        WS  G  +A    +    ++  +  +  + + L + S   
Sbjct: 332 NGGAPAQISHSESGIQSAFSWSQDGKSLALVCDN----SVMRLDMESGKMQRLTQRSENA 387

Query: 393 ---QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               A  +SP G  + F R+ +G   +++   D +
Sbjct: 388 PCADAVVYSPDGSKVAFMRQCNG--YAQICVADSD 420


>gi|168700793|ref|ZP_02733070.1| RNA polymerase sigma-H factor [Gemmata obscuriglobus UQM 2246]
          Length = 586

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 88/248 (35%), Gaps = 27/248 (10%)

Query: 211 DQILFEPRFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           D   +    SPN Q++A   +       + ++R           P   G          +
Sbjct: 316 DPPAWNGSLSPNGQRLAALEFAADIGRAKLVIRSRREQDESATVPLVFGQPGRSGGHMVW 375

Query: 266 SSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESD 321
           S++G+R LI  +   D+    Y+  +    T++LT+    +   +  +S D  +  F  D
Sbjct: 376 SADGRRTLIVETGFGDKGKREYAHRVYDLITKQLTDVKLPDGCLATGWSADGKR--FLGD 433

Query: 322 ---REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------FSGEKFA 372
               +   ++  + + G+ +       +   +    SP G  + +            K  
Sbjct: 434 VRPSDDTVRVAWLSAEGAGKPEYISPDDEIAYGGRLSPNGKRVLYMSGPKPAKDQQAKIR 493

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-------GDTGSKLYSIDLNG 425
           + V      +   + E        WSP G  + ++ ++         +  ++L + D +G
Sbjct: 494 LHVQDLATGKRTPVDEPGETHGYCWSPDGSRVAYTWQRSLEKPSEVPERETQLITADPDG 553

Query: 426 RNETLINT 433
           RN  ++ +
Sbjct: 554 RNRKVVTS 561



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 60/191 (31%), Gaps = 16/191 (8%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
              + R   + E+      K        D    +              +S + ++     
Sbjct: 375 WSADGRRTLIVETGFGDKGKREYAHRVYDLITKQLTDVKLPDGCLATGWSADGKRFLGDV 434

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV----QKDEAMDI-- 284
              +D +RV  +       P+ I     +    R S NGKR L        KD+   I  
Sbjct: 435 RPSDDTVRVAWLSAEGAGKPEYISPDDEIAYGGRLSPNGKRVLYMSGPKPAKDQQAKIRL 494

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE---------GKEQLYVMQSNG 335
           +  DL +     + +         +SPD S++ +   R           + QL     +G
Sbjct: 495 HVQDLATGKRTPV-DEPGETHGYCWSPDGSRVAYTWQRSLEKPSEVPERETQLITADPDG 553

Query: 336 SDQKRISQDKE 346
            ++K ++  K 
Sbjct: 554 RNRKVVTSRKY 564


>gi|145522917|ref|XP_001447301.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414804|emb|CAK79904.1| unnamed protein product [Paramecium tetraurelia]
          Length = 442

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 81/242 (33%), Gaps = 23/242 (9%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             ++ + D     IR +     ++     FS N   +A           VYL + + ++ 
Sbjct: 214 DTTIRLWDVKTGKIRTVLKGESEVSSV-CFSFNGTILA-----SRCGKYVYLWNLKTEKY 267

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             ++    S      FS +          +    I   D+++   +   +         +
Sbjct: 268 IWKLNGHSSTKFQVCFSPDSTILAF---DNGNNSICLWDVKTGQQKAKLDGHSNTCQVCF 324

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SP+ + +   +D      +Y+       QK       +  +   +SP G ++A       
Sbjct: 325 SPNGTTLASGND---DNSIYLWDVKTGQQKAKLDGHSSQVYSVCFSPDGTILASGSNDQS 381

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGR 426
              I +      QE+  ++  + Q  +  +SP G +L       G  G  +   D+  G+
Sbjct: 382 ---IRLWDVKTGQEKAKLDGHSFQVKSICFSPDGSTLA-----SGSYGDSIRLWDIQTGK 433

Query: 427 NE 428
            +
Sbjct: 434 KK 435



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/258 (15%), Positives = 82/258 (31%), Gaps = 40/258 (15%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWDVK  K                        I   + GE    +    F + ++++ 
Sbjct: 217 IRLWDVKTGK------------------------IRTVLKGESEVSSVCFSF-NGTILAS 251

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + + +       +         F+  FSP+   +A+    D     + L D +  
Sbjct: 252 RCGKYVYLWNLKTEKYIWKLNGHSSTKFQVCFSPDSTILAF----DNGNNSICLWDVKTG 307

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINIS 306
           +   ++ +  S      FS NG         ++   IY  D+++   + +L        S
Sbjct: 308 QQKAKL-DGHSNTCQVCFSPNGTTLA---SGNDDNSIYLWDVKTGQQKAKLDGHSSQVYS 363

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPD + +   S+    + + +       +K              +SP G  +A   +
Sbjct: 364 VCFSPDGTILASGSN---DQSIRLWDVKTGQEKAKLDGHSFQVKSICFSPDGSTLASGSY 420

Query: 367 SGEKFAIGVMKKDGSQER 384
                 I +      +++
Sbjct: 421 GDS---IRLWDIQTGKKK 435


>gi|282163878|ref|YP_003356263.1| hypothetical protein MCP_1208 [Methanocella paludicola SANAE]
 gi|282156192|dbj|BAI61280.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 171

 Score = 76.2 bits (186), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 56/159 (35%), Gaps = 10/159 (6%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +    + +++ +FS +GK+   S   D  + I+         ++L   +       +S D
Sbjct: 12  LTGHTAPVISCQFSPDGKKIA-SASYDGTVRIWDA-ADGKLLQKLEGPMSAVFYCVFSSD 69

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             ++   S R+G  +++              D+    +   +SP G  IA     G    
Sbjct: 70  GRKVASLS-RDGAVRVW--DVETGKLMHTLYDQADKVYHCAFSPDGKKIATASHDG---L 123

Query: 373 IGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRK 409
           + +   D  +    +        +  +SP G+ L+    
Sbjct: 124 VRIWDADTGKLLQTLAGHKKAVLSCEFSPDGKRLVTVSS 162



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 65/150 (43%), Gaps = 11/150 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ +K+A A+YD      V + D    +  +++    S +    FSS+G++   S+ +
Sbjct: 24  FSPDGKKIASASYDG----TVRIWDAADGKLLQKLEGPMSAVFYCVFSSDGRKVA-SLSR 78

Query: 279 DEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D A+ ++  D+++      L +        ++SPD  +I   +  +G  +++   ++   
Sbjct: 79  DGAVRVW--DVETGKLMHTLYDQADKVYHCAFSPDGKKIA-TASHDGLVRIW--DADTGK 133

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +     + +     +SP G  +      
Sbjct: 134 LLQTLAGHKKAVLSCEFSPDGKRLVTVSSD 163



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 11/136 (8%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT      IS  +SPD  +I   S  +G  +++   +      +  +   ++ F  V+S 
Sbjct: 12  LTGHTAPVISCQFSPDGKKIASASY-DGTVRIW--DAADGKLLQKLEGPMSAVFYCVFSS 68

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDT 414
            G  +A     G   A+ V   +  +    L + ++ +    +SP G+ +  +     D 
Sbjct: 69  DGRKVASLSRDG---AVRVWDVETGKLMHTLYDQADKVYHCAFSPDGKKIATASH---DG 122

Query: 415 GSKLYSIDLNGRNETL 430
             +++  D     +TL
Sbjct: 123 LVRIWDADTGKLLQTL 138



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 61/152 (40%), Gaps = 10/152 (6%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE-KGDFNSRILFVSESVVSGIIKNSL 193
           D K+I    +  +     +I       + Q + G     F          V S     ++
Sbjct: 27  DGKKIASASYDGTV----RIWDAADGKLLQKLEGPMSAVFYCVFSSDGRKVASLSRDGAV 82

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V D +   + +    +   ++   FSP+ +K+A A++D      V + D    +  + +
Sbjct: 83  RVWDVETGKLMHTLYDQADKVYHCAFSPDGKKIATASHDG----LVRIWDADTGKLLQTL 138

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
              +  +L+  FS +GKR + +V  D+ + ++
Sbjct: 139 AGHKKAVLSCEFSPDGKRLV-TVSSDKTVKVW 169


>gi|158334237|ref|YP_001515409.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158304478|gb|ABW26095.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1174

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/296 (16%), Positives = 115/296 (38%), Gaps = 24/296 (8%)

Query: 125  RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--SE 182
            +V +R     D +Q+           W +   T  + + Q  + E G     + +     
Sbjct: 851  QVAYR----SDGQQLAAISPSHKIYRWHRQTSTTFEAVPQVTSPELGGPLHGLAYHPNKP 906

Query: 183  SVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             +V+      + + + DG+   R  TPSR   L+   +SP+  ++A  + D+      + 
Sbjct: 907  ELVTTDRGGYIHIWNADGSLRTRRSTPSR---LWSVEYSPDGHQLAIGSADNTIQRWQFD 963

Query: 242  MDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
               ++++AP + +   ++ +    FS +G+   +S   D+ + +++ D        L+  
Sbjct: 964  DQGQLEQAPFQILEGHQATVRDVSFSPDGQW-FVSASLDKTLKLWARD--GTLKTTLSKH 1020

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S + SP+S   V  S+    +    + +      +   + +++  +   SP G  
Sbjct: 1021 RAAVQSVAISPNSQWFVSASE----DSDIKLWTASGQIIQTLPEHQSAVREVAISPDGKW 1076

Query: 361  IAFTKFSGEKFAIGVMKKDGSQE-----RLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            +A          +  +    S        L+  D  +++ T+SP G+SL+ +    
Sbjct: 1077 LASAAMDNTV-KLWQVDLSSSTPAKLFRTLIGHDRAIRSITFSPDGKSLVSASDDQ 1131



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 82/254 (32%), Gaps = 37/254 (14%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAP 263
            P    ++ +  FSPN + +A  + D               R  + +  F+     + + 
Sbjct: 760 LPGHGALIRDMAFSPNGELIASVSSDK--------TVKLWHRNGQLLRTFKGHQATVWSV 811

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G+  L S  +D  +  + ++  +   +RL          +Y  D  Q+   S   
Sbjct: 812 TFSPDGQFLL-SSSEDGTVRYWQLN--NPFWQRLGGPTDFLSQVAYRSDGQQLAAISP-- 866

Query: 324 GKEQLYVMQSNGSD-----QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
              ++Y      S       +  S +         + P    +  T   G    I +   
Sbjct: 867 -SHKIYRWHRQTSTTFEAVPQVTSPELGGPLHGLAYHPNKPELVTTDRGG---YIHIWNA 922

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSR----------KKDGDTGSKLYSIDLNGRNE 428
           DGS        S L +  +SP G  L                 G      + I L G   
Sbjct: 923 DGSLRTRRSTPSRLWSVEYSPDGHQLAIGSADNTIQRWQFDDQGQLEQAPFQI-LEGHQA 981

Query: 429 TLINTPAYASDPQW 442
           T+ +  +++ D QW
Sbjct: 982 TVRDV-SFSPDGQW 994



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 100/271 (36%), Gaps = 30/271 (11%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ +  R+G  +R         ++   FSP+ Q   +     ED    Y     
Sbjct: 781  SVSSDKTVKLWHRNGQLLRT-FKGHQATVWSVTFSPDGQ---FLLSSSEDGTVRYWQ--L 834

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTL-- 301
             +   +R+G     +    + S+G++   ++     +  +     +   A  ++T+    
Sbjct: 835  NNPFWQRLGGPTDFLSQVAYRSDGQQLA-AISPSHKIYRWHRQTSTTFEAVPQVTSPELG 893

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  +Y P+  ++V  +DR G   +++  ++GS + R  +   +  +   +SP G  +
Sbjct: 894  GPLHGLAYHPNKPELV-TTDRGGY--IHIWNADGSLRTR--RSTPSRLWSVEYSPDGHQL 948

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV-----EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            A                 G  E+          + ++  ++SP G+  + +     D   
Sbjct: 949  AIGSADNTIQR-WQFDDQGQLEQAPFQILEGHQATVRDVSFSPDGQWFVSASL---DKTL 1004

Query: 417  KLYSIDLN-----GRNETLINTPAYASDPQW 442
            KL++ D        ++   + + A + + QW
Sbjct: 1005 KLWARDGTLKTTLSKHRAAVQSVAISPNSQW 1035



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/200 (12%), Positives = 64/200 (32%), Gaps = 17/200 (8%)

Query: 187  GIIKNSLCVMDRDGAN-----IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            G   N++     D           +       + +  FSP+ Q   + +   +  L+++ 
Sbjct: 951  GSADNTIQRWQFDDQGQLEQAPFQILEGHQATVRDVSFSPDGQW--FVSASLDKTLKLWA 1008

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D         +   R+ + +   S N  +  +S  +D  + +++        + L    
Sbjct: 1009 RD---GTLKTTLSKHRAAVQSVAISPN-SQWFVSASEDSDIKLWT--ASGQIIQTLPEHQ 1062

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQG 358
                  + SPD   +   +  +   +L+ +  + S   ++ +     + +     +SP G
Sbjct: 1063 SAVREVAISPDGKWLA-SAAMDNTVKLWQVDLSSSTPAKLFRTLIGHDRAIRSITFSPDG 1121

Query: 359  DLIAFTKFSGEKFAIGVMKK 378
              +             + K 
Sbjct: 1122 KSLVSASDDQTLMRWNLAKL 1141



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 95/303 (31%), Gaps = 35/303 (11%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGII-----KNSLCVMDRDGANIRYLTPSRDQIL 214
           D I  S    K  F +R   +  S+                 +  G  I+        I 
Sbjct: 658 DRIVTSTNSHKVQFWTRTGELINSITKTKFFTQSADGRYLANNYKGHVIQIRAADSTLIR 717

Query: 215 FEP---------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             P         R SPN   +A    D +  +R     T+  +    +    ++I    F
Sbjct: 718 ELPPAPELLRIIRLSPNGDYIAATGLDQKIRIR-----TKNGKLVSELPGHGALIRDMAF 772

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NG+    SV  D+ + ++                    S ++SPD  Q +  S  +G 
Sbjct: 773 SPNGELIA-SVSSDKTVKLW--HRNGQLLRTFKGHQATVWSVTFSPDG-QFLLSSSEDGT 828

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            + + + +     +R+    +       +   G  +A    S + +          +   
Sbjct: 829 VRYWQLNNPF--WQRLGGPTD-FLSQVAYRSDGQQLAAISPSHKIYRWHRQTSTTFEAVP 885

Query: 386 LVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            V    L  P     + P+   L+ +  + G     ++  + +G   T  +TP+     +
Sbjct: 886 QVTSPELGGPLHGLAYHPNKPELV-TTDRGG----YIHIWNADGSLRTRRSTPSRLWSVE 940

Query: 442 WVG 444
           +  
Sbjct: 941 YSP 943



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 76/210 (36%), Gaps = 28/210 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  ++A A  D    L  +    R  +      N ++ +    FS +G+    S  
Sbjct: 570 AISPDGTQIATAAADGSVSLWGWDGQRRWQKF-----NHQAEVNQVVFSPDGQTLA-SAS 623

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++  +LQ   T  L++      +  ++    +IV  S    K Q +     G  
Sbjct: 624 ADRTVKLW--NLQGKVTHTLSSFDAEVRALVFNAKGDRIV-TSTNSHKVQFWT--RTGEL 678

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPT 396
              I++ K  +      S  G  +A    + +   I +   D +  R L      L+   
Sbjct: 679 INSITKTKFFTQ-----SADGRYLA---NNYKGHVIQIRAADSTLIRELPPAPELLRIIR 730

Query: 397 WSPSGRSLIFS--------RKKDGDTGSKL 418
            SP+G  +  +        R K+G   S+L
Sbjct: 731 LSPNGDYIAATGLDQKIRIRTKNGKLVSEL 760


>gi|294675371|ref|YP_003575987.1| lipoprotein [Prevotella ruminicola 23]
 gi|294471620|gb|ADE81009.1| putative lipoprotein [Prevotella ruminicola 23]
          Length = 482

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 87/254 (34%), Gaps = 50/254 (19%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------- 278
               E    V     +      R  +    ++ P +  +G+    S  K           
Sbjct: 191 HVRGEHGATVVHQHGKDVLLKARNDSLGGTMVYPYWHPSGRYCAFSTNKTAQMFHTGNNK 250

Query: 279 -----DEAMDIYSVDLQSNATER----LTNTLFINISASYSPDSSQIVFESDREGK---- 325
                D + D++  D++ +   +    +T     N   ++SPD   + F + R G     
Sbjct: 251 RIEVFDTSSDVFVYDMEKHEVIKDTLIMTTGWAENT-PAFSPDGKWLYFTTVRCGNYPKG 309

Query: 326 -----EQLYVMQSN------GSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKF- 371
                  L  +  +      G++   +        S   P  S  G  + +T+     F 
Sbjct: 310 YDQVRYSLCRVAFDEKSGKIGTEVDTLVNAGVTGKSVTWPRPSYDGKYLMYTQLDYGYFS 369

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLY--S 420
                  + ++  +    R L E +++++ +   W+ + R  +F+ +++    ++LY  S
Sbjct: 370 VWHPEADLYMLDLETGVNRPLNEVNSIRSESLHNWTRNSRWFLFTSRREDGLYTRLYFSS 429

Query: 421 IDLNGRNETLINTP 434
           +D +G+       P
Sbjct: 430 VDEHGKATKPFLLP 443


>gi|323489402|ref|ZP_08094631.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Planococcus donghaensis MPA1U2]
 gi|323396896|gb|EGA89713.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Planococcus donghaensis MPA1U2]
          Length = 554

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 81/233 (34%), Gaps = 25/233 (10%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDT----RIDRAPKRIGNFRSMILAPRFSSNG 269
           + +P+ SPN ++  Y     ++    Y+ +      + R   +    +  I  P++S +G
Sbjct: 16  VTDPQISPNGKRAVYVHTTIDEQEDAYIANLFHIDLVTRQHSQWTFGKGRISLPQWSVDG 75

Query: 270 KRALISV-QKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES------- 320
                   ++D    ++ + +      ++T+  + I     +SP   +I           
Sbjct: 76  TAVAYIAEEEDGHKQLFVLSVADGQINKMTDLEIGIERF-QWSPCGKKIWVNGILDKEQI 134

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IG 374
                +Q+  +       +++    +  Y     S   + I +     ++        + 
Sbjct: 135 TESFYQQIGFLTIESKKIEQVL-AGDCHYRLEAISHDEEKIVYALVKEQQHDFVPGQPLY 193

Query: 375 VMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFS---RKKDGDTGSKLYSIDL 423
           +     ++  +L E   +    T+S     L +    R+    T ++LY  DL
Sbjct: 194 LYHFQTNEHTMLTENQGHFSGVTFSHDDSKLAYFGNKRQYGEATQNELYIADL 246



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 13/107 (12%)

Query: 348 SYFDPVWSPQGDLIAFTKFS---------GEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           S  DP  SP G    +   +            F I ++ +  SQ         +  P WS
Sbjct: 15  SVTDPQISPNGKRAVYVHTTIDEQEDAYIANLFHIDLVTRQHSQW--TFGKGRISLPQWS 72

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
             G ++ +  +++ D   +L+ + + +G+   + +        QW  
Sbjct: 73  VDGTAVAYIAEEE-DGHKQLFVLSVADGQINKMTDLEIGIERFQWSP 118


>gi|4158240|emb|CAA10512.1| WD-40 repeat protein [Streptomyces coelicolor A3(2)]
          Length = 1049

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 95/306 (31%), Gaps = 42/306 (13%)

Query: 149 ASWRKIAHTISDD----------IYQSITGEKGDFNSRILFVSESVVSGI------IKNS 192
           A     AH +  D          I  +        ++  ++++     G          +
Sbjct: 361 AQLDLAAHRLRPDDEDVRNRLISIVNAPLATPLLGHTGAVYLTSFSPDGRILATASYDRT 420

Query: 193 LCVMD-RDGANIRYL---TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           + + D  D    + L          +    FSP+ + +A A+ D    L       R   
Sbjct: 421 VRLWDVSDPGRPQQLGKPLTGHTSWVSTAVFSPDGRTLASASDDGTIRLWDVTDPGRPRP 480

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINI 305
               +      +    FS +G+    S   D A+ +++V     A E    LT +     
Sbjct: 481 LGAPLDGHGGTVYLLAFSPDGRTLA-SAHDDHAVRLWNV-ADRRAPEALDTLTGSTGAVR 538

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK------EASYFDPVWSPQGD 359
           S ++SPD   +       G +   V   + SD +R                   +SP G 
Sbjct: 539 SVAFSPDGDTLA-----SGGDDDKVRLWDVSDPRRPEPAGAPLAGHSGLVHSVAFSPDGH 593

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            +A            V    G++     L      + A  +SP G  L  S     D+ +
Sbjct: 594 TLASGSADDTVQLWDVTDPAGAKPVGAPLTGHSGPVWAVAFSPDGAMLAVSS---ADSTA 650

Query: 417 KLYSID 422
            L+++ 
Sbjct: 651 SLWNVS 656



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 77/242 (31%), Gaps = 14/242 (5%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                ++   FSP+ + +A A+YD    L       R  +  K +    S +    FS +
Sbjct: 395 GHTGAVYLTSFSPDGRILATASYDRTVRLWDVSDPGRPQQLGKPLTGHTSWVSTAVFSPD 454

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGK 325
           G+    S   D  + ++ V            L          ++SPD   +    D    
Sbjct: 455 GRTLA-SASDDGTIRLWDVTDPGRPRPLGAPLDGHGGTVYLLAFSPDGRTLASAHDDHAV 513

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM----KKDGS 381
               V      +          +     +SP GD +A +    +K  +  +    + + +
Sbjct: 514 RLWNVADRRAPEALDTLTGSTGAVRSVAFSPDGDTLA-SGGDDDKVRLWDVSDPRRPEPA 572

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASDP 440
              L      + +  +SP G +L        D   +L+ + D  G          ++  P
Sbjct: 573 GAPLAGHSGLVHSVAFSPDGHTLA---SGSADDTVQLWDVTDPAGAKPVGAPLTGHSG-P 628

Query: 441 QW 442
            W
Sbjct: 629 VW 630



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 12/214 (5%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +P  S      A+    D++ +R  L+          +      +    FS +G R L +
Sbjct: 356 DPSLSAQLDLAAHRLRPDDEDVRNRLISIVNAPLATPLLGHTGAVYLTSFSPDG-RILAT 414

Query: 276 VQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
              D  + ++ V          + LT       +A +SPD   +   SD +G  +L+ + 
Sbjct: 415 ASYDRTVRLWDVSDPGRPQQLGKPLTGHTSWVSTAVFSPDGRTLASASD-DGTIRLWDVT 473

Query: 333 SNGSDQKR--ISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVE 388
             G  +           + +   +SP G  +A          + +   +   + + L   
Sbjct: 474 DPGRPRPLGAPLDGHGGTVYLLAFSPDGRTLASAHDDHAVRLWNVADRRAPEALDTLTGS 533

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              +++  +SP G +L        D   +L+ + 
Sbjct: 534 TGAVRSVAFSPDGDTLA---SGGDDDKVRLWDVS 564



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 61/319 (19%), Positives = 100/319 (31%), Gaps = 40/319 (12%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              RLWDV D  + +       P            DI   +    G         + +V+ 
Sbjct: 728  RVRLWDVTDPGRPVSLSAPFEPGDG---------DIRSLVFSPDGG--------TLAVLV 770

Query: 187  GIIKNSLC-VMDRDGANIRYLTPSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYLM 242
            G     L  V D  G        +       P    FSP+ + +A A  D    L     
Sbjct: 771  GGRALQLWDVTDPAGPTAHGPPVALSTRYAGPDTLAFSPDGRTLATAHDDRTIQLWNADD 830

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----T 298
             +R  R  K +      +    FS +G+    S   D+A+ ++ V        RL    T
Sbjct: 831  PSRPRRLGKPLAGHSGYVNTLAFSPDGRTLA-SGGADDAVRLWDV-TDPAHATRLGAART 888

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSP 356
              L      +YSPD   +   SD +G  +L+ +   G      +     +       +S 
Sbjct: 889  GHLGPVNVLAYSPDGHTLASGSD-DGTVRLWDVTEPGEGSGGGTTLAGHTDSVVSLTFSQ 947

Query: 357  QGDLIAFTKFSGEKFAIGVMKKD-----GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             GD +A            V         G       +  N    ++SP    L  S    
Sbjct: 948  DGDTLASGANDNTVRLWSVTDPAEAAPIGRAMSPNAKTGNFL--SFSPVSHMLGVSS--- 1002

Query: 412  GDTGSKLYSIDLNGRNETL 430
            G    +L+S+ ++   + +
Sbjct: 1003 GTDTVRLWSLGVDDAIDRI 1021



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 86/281 (30%), Gaps = 31/281 (11%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMD-RDGANIRY---LTP 208
           +A   + +   ++TG  G   S       +++ SG   + + + D  D            
Sbjct: 518 VADRRAPEALDTLTGSTGAVRSVAFSPDGDTLASGGDDDKVRLWDVSDPRRPEPAGAPLA 577

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
               ++    FSP+   +A  + DD   L               +      + A  FS +
Sbjct: 578 GHSGLVHSVAFSPDGHTLASGSADDTVQLWDVTDPAGAKPVGAPLTGHSGPVWAVAFSPD 637

Query: 269 GKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           G    +S     A      D    S     L        +  +SPD   +   S   G  
Sbjct: 638 GAMLAVSSADSTASLWNVSDPAYPSQVGVPLAGGSGEMYALGFSPDGHTLATGS---GDS 694

Query: 327 QLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           ++ +     SD   RI            + P G ++A     G      V      +   
Sbjct: 695 KVRLWSLPTSDMIGRI----------GAFRPDGHVLATAARDGRVRLWDVTDP--GRPVS 742

Query: 386 LVE-----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           L       D ++++  +SP G +L       G    +L+ +
Sbjct: 743 LSAPFEPGDGDIRSLVFSPDGGTLAVLV---GGRALQLWDV 780


>gi|322705681|gb|EFY97265.1| wd-repeat protein [Metarhizium anisopliae ARSEF 23]
          Length = 1528

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 85/239 (35%), Gaps = 16/239 (6%)

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATYDDE 234
              F S+S   G +     +   D  +              P    SP+ + +A      E
Sbjct: 1128 FTFASDSKTLGSVSTDGTICLWDIESGICARSFSPGWNNWPTIALSPDLKTIA--MGGLE 1185

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA- 293
            D  R  L+D +     +   +  S +     S + K    +   D+ + I+  D++S   
Sbjct: 1186 DTTR--LLDIKDWSQQEEAQSHHSRVTDVVVSPD-KTVAATASHDKDIRIW--DIESGEC 1240

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             +RL        S ++SPD   +   S   G + + V      + ++  Q   A+     
Sbjct: 1241 LQRLCGHKDAVHSVAFSPDGQSLASAS---GDKTVRVWDLKTGEARQTWQGHTAAVKCVA 1297

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP G ++A      +   +  +   GS   +  +  +     +S   ++L  S  KDG
Sbjct: 1298 FSPDGKMVASFS-EDKTVRLWAVDT-GSSVPIRGQSESQSCIAFSNDSKTLA-SVNKDG 1353



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 87/261 (33%), Gaps = 32/261 (12%)

Query: 191  NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             ++    + G +       R   +    FS +     + +   E  L V+ ++T I    
Sbjct: 931  RNMVTTQQTGDSNTRTLDGRYGAVTAVAFSEDGS---FFSTGTEGSLTVWKVETWIPICT 987

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              + +   +     FS + K  +++V  D    ++  D+++    R              
Sbjct: 988  IFLPDSTGVAEELSFSPDSKS-VMAVYGD---TLHICDVETKTQIRTLVH---------- 1033

Query: 311  PDSSQIV---FESDREG------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            P+  +I    F+SD +G         ++V  +     +++   K  +      SP    +
Sbjct: 1034 PEKRKIACANFQSDSKGVVMVLRDATVHVWDAETDKFEQVFAAKGEAKSIIALSPNNKTL 1093

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A +          V    G   R+L   D   +  T++   ++L  S   DG     +  
Sbjct: 1094 AVSLLQNLIGIWDVSTGSGDSARVLKRHDEAFRDFTFASDSKTLG-SVSTDGT----ICL 1148

Query: 421  IDLNGRNETLINTPAYASDPQ 441
             D+         +P + + P 
Sbjct: 1149 WDIESGICARSFSPGWNNWPT 1169


>gi|307607782|emb|CBI44153.1| acylaminoacyl-peptidase fragment [Bacillus amyloliquefaciens DSM 7]
          Length = 148

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 8/113 (7%)

Query: 259 MILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +  P+++ +G+RA     K        +  I   D +S  +   T     N S  +SPD
Sbjct: 15  SVTDPQYAPDGRRAAYVRTKVNDKRDSYSSAIMVYDTESGTSNPWTFGDNKNSSPRWSPD 74

Query: 313 SSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             ++ F SDR +G  QLY++ + G + +R + D      DP+W+P G  +  +
Sbjct: 75  GRRLAFVSDREDGVPQLYIIDAAGGEAER-AADIPWGVADPIWAPDGRSVLVS 126



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 5/108 (4%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM----ILAPRFSSNG 269
           + +P+++P+ ++ AY      D    Y     +        N  +       +PR+S +G
Sbjct: 16  VTDPQYAPDGRRAAYVRTKVNDKRDSYSSAIMVYDTESGTSNPWTFGDNKNSSPRWSPDG 75

Query: 270 KRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +R      + D    +Y +D      ER  +  +      ++PD   +
Sbjct: 76  RRLAFVSDREDGVPQLYIIDAAGGEAERAADIPWGVADPIWAPDGRSV 123



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 9/111 (8%)

Query: 305 ISASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               Y+PD  +  +   +           + V  +        +     +   P WSP G
Sbjct: 17  TDPQYAPDGRRAAYVRTKVNDKRDSYSSAIMVYDTESGTSNPWTFGDNKN-SSPRWSPDG 75

Query: 359 DLIAFTK-FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFS 407
             +AF          + ++   G +     +    +  P W+P GRS++ S
Sbjct: 76  RRLAFVSDREDGVPQLYIIDAAGGEAERAADIPWGVADPIWAPDGRSVLVS 126



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 41/105 (39%), Gaps = 9/105 (8%)

Query: 348 SYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPS 400
           S  DP ++P G   A+ +            AI V   +          D+   +P WSP 
Sbjct: 15  SVTDPQYAPDGRRAAYVRTKVNDKRDSYSSAIMVYDTESGTSNPWTFGDNKNSSPRWSPD 74

Query: 401 GRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQWVG 444
           GR L F   ++ D   +LY ID   G  E   + P   +DP W  
Sbjct: 75  GRRLAFVSDRE-DGVPQLYIIDAAGGEAERAADIPWGVADPIWAP 118



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 46/105 (43%), Gaps = 6/105 (5%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           R  +V   V       S  +M  D   G +  +     D     PR+SP+ +++A+ +  
Sbjct: 27  RAAYVRTKVNDKRDSYSSAIMVYDTESGTSNPWTF--GDNKNSSPRWSPDGRRLAFVSDR 84

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           ++ + ++Y++D     A +        +  P ++ +G+  L+SV 
Sbjct: 85  EDGVPQLYIIDAAGGEAERAADIPWG-VADPIWAPDGRSVLVSVS 128


>gi|218440929|ref|YP_002379258.1| hypothetical protein PCC7424_4016 [Cyanothece sp. PCC 7424]
 gi|218173657|gb|ACK72390.1| WD40 domain protein beta Propeller [Cyanothece sp. PCC 7424]
          Length = 169

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 60/137 (43%), Gaps = 11/137 (8%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI------ 305
           R  N  +  L P+ SS  +  + +  ++ + D+Y  D Q+    +L NT  +N       
Sbjct: 35  RSLNSFASELTPQVSS--RFIVFTSDRNGSQDVYLYDAQN---RQLVNTPGLNSLDEIAS 89

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             + S D   IVFE+ R+G+  +++       ++ ++    A   +P  S  G  IAF  
Sbjct: 90  HPAISEDGRYIVFEASRQGRTGIFLYDRQTQQKRNLTASLPAQVRNPTISADGTTIAFEV 149

Query: 366 FSGEKFAIGVMKKDGSQ 382
               ++ + V  + G Q
Sbjct: 150 AKDGQWDLMVYNRSGQQ 166



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 14/138 (10%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D    +     N+    ++   S  S  IVF SDR G + +Y+  +   +++ ++     
Sbjct: 31  DAAGRSL----NSFASELTPQVS--SRFIVFTSDRNGSQDVYLYDAQ--NRQLVNTPGLN 82

Query: 348 SY----FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSG 401
           S       P  S  G  I F      +  I +  +   Q+R L     + ++ PT S  G
Sbjct: 83  SLDEIASHPAISEDGRYIVFEASRQGRTGIFLYDRQTQQKRNLTASLPAQVRNPTISADG 142

Query: 402 RSLIFSRKKDGDTGSKLY 419
            ++ F   KDG     +Y
Sbjct: 143 TTIAFEVAKDGQWDLMVY 160



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 4/125 (3%)

Query: 215 FEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             P+ S   + + + +  +    + +Y    R       + +   +   P  S +G+  +
Sbjct: 44  LTPQVS--SRFIVFTSDRNGSQDVYLYDAQNRQLVNTPGLNSLDEIASHPAISEDGRYIV 101

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               +     I+  D Q+     LT +      + + S D + I FE  ++G+  L V  
Sbjct: 102 FEASRQGRTGIFLYDRQTQQKRNLTASLPAQVRNPTISADGTTIAFEVAKDGQWDLMVYN 161

Query: 333 SNGSD 337
            +G  
Sbjct: 162 RSGQQ 166



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 5/104 (4%)

Query: 195 VMDRDGANIRYL----TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           V   D  N + +      S D+I   P  S + + + +          ++L D +  +  
Sbjct: 65  VYLYDAQNRQLVNTPGLNSLDEIASHPAISEDGRYIVFEASRQGRT-GIFLYDRQTQQKR 123

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               +  + +  P  S++G      V KD   D+   +      
Sbjct: 124 NLTASLPAQVRNPTISADGTTIAFEVAKDGQWDLMVYNRSGQQI 167



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 35/107 (32%), Gaps = 12/107 (11%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-------A 394
           S +  AS   P  S     I FT        + +      Q R LV    L         
Sbjct: 36  SLNSFASELTPQVS--SRFIVFTSDRNGSQDVYLYDA---QNRQLVNTPGLNSLDEIASH 90

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           P  S  GR ++F   + G TG  LY      +     + PA   +P 
Sbjct: 91  PAISEDGRYIVFEASRQGRTGIFLYDRQTQQKRNLTASLPAQVRNPT 137


>gi|170114097|ref|XP_001888246.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636735|gb|EDR01027.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1117

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 82/252 (32%), Gaps = 39/252 (15%)

Query: 182 ESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +++VSG    ++ V D   G +I  +    D       FSP+ + +  AT        + 
Sbjct: 648 KNIVSGSNDKTIRVWDALSGQSIMVIFRGSDPFYTV-AFSPDGKHILSAT----QYRIIR 702

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---L 297
             +      P  + +    + +  FS NGK  +    +     I   D  +  TE     
Sbjct: 703 FWNALTSHCP--LEDDEGSVYSVAFSPNGKHII---SRCGDNTIKVWDALTGHTEVDHVR 757

Query: 298 TNTLFINISASYSPDSSQIVFESDRE------------------GKEQLYVMQSNGSDQK 339
            +   I  S ++SP+   IV  S+                    G +++       SD +
Sbjct: 758 GHNQGI-RSVAFSPNGKHIVSGSNGATLRIWDALTGVSVMGPLRGHDKMVTSVVFSSDGR 816

Query: 340 RISQDKE------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            I+                 +SP G  IA   +         +      + L        
Sbjct: 817 YIASGSHDCTVRVWDALTVAFSPDGRYIASGSWDKTVRVWNALTGQSVLDSLTSHTHQFH 876

Query: 394 APTWSPSGRSLI 405
           + ++SP GR +I
Sbjct: 877 SVSFSPDGRFII 888



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 80/253 (31%), Gaps = 45/253 (17%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQI 213
            HT  D +     G +    S       S  +G    +L + D   G ++       D++
Sbjct: 749 GHTEVDHVRGHNQGIRSVAFSPNGKHIVSGSNGA---TLRIWDALTGVSVMGPLRGHDKM 805

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +    FS + + +A  ++D                   R+ +     L   FS +G+   
Sbjct: 806 VTSVVFSSDGRYIASGSHD----------------CTVRVWD----ALTVAFSPDGRYIA 845

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ- 332
            S   D+ + +++     +  + LT+      S S+SPD     F         + V   
Sbjct: 846 -SGSWDKTVRVWNALTGQSVLDSLTSHTHQFHSVSFSPDGR---FIISGSEDRTITVWDT 901

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             G    +  +          +SP G  I        ++                  S +
Sbjct: 902 LMGQSIMKPLRGHNNQVNSVFFSPDGRYIVDLMIELSEWH----------------ASYV 945

Query: 393 QAPTWSPSGRSLI 405
            +  +SP GR ++
Sbjct: 946 TSVAFSPDGRYIV 958



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/297 (16%), Positives = 96/297 (32%), Gaps = 43/297 (14%)

Query: 128 FRLWDVKDRKQII----GKKFFSSPASWRKIAHTISDDIYQSI-------TGEKGDFNSR 176
            R+WD    + I+    G   F + A      H +S   Y+ I       +    + +  
Sbjct: 659 IRVWDALSGQSIMVIFRGSDPFYTVAFSPDGKHILSATQYRIIRFWNALTSHCPLEDDEG 718

Query: 177 ILFVSESVVSGI------IKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            ++      +G         N++ V D   G          +Q +    FSPN + +   
Sbjct: 719 SVYSVAFSPNGKHIISRCGDNTIKVWDALTGHTEVDHVRGHNQGIRSVAFSPNGKHI--V 776

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +  +   LR++   T +      +     M+ +  FSS+G+    S   D  + ++    
Sbjct: 777 SGSNGATLRIWDALTGVSVMG-PLRGHDKMVTSVVFSSDGRYIA-SGSHDCTVRVWDA-- 832

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEAS 348
                  LT         ++SPD   I   S     + + V  +        S       
Sbjct: 833 -------LTV--------AFSPDGRYIASGS---WDKTVRVWNALTGQSVLDSLTSHTHQ 874

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +    +SP G  I              +      + L   ++ + +  +SP GR ++
Sbjct: 875 FHSVSFSPDGRFIISGSEDRTITVWDTLMGQSIMKPLRGHNNQVNSVFFSPDGRYIV 931



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 73/219 (33%), Gaps = 29/219 (13%)

Query: 203 IRYLTPSRDQILFEP---------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           ++ LT    Q+ + P          +SPN + +   + D      + + D         +
Sbjct: 498 VKTLTIENSQMKWWPDRCLMRIKVAYSPNGRHIISGSQDS----TIKVWDA--------L 545

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                 + +  +S  G   + S   D+ + +++        + L        S +YSP  
Sbjct: 546 TGHNGYVTSVAYSPTGTDIV-SGSADKTIRVWNALTGQRFMDPLKGHSDWVTSVAYSPSG 604

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             IV  S  +   +++  ++       +    + +     +SP G  I           I
Sbjct: 605 RHIVSGSH-DCTVRIWNTETGQGVMDPLI-GHDDNVNCVAYSPNGKNIVSGSNDKT---I 659

Query: 374 GVMK-KDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKK 410
            V     G    ++   S+      +SP G+ ++ + + 
Sbjct: 660 RVWDALSGQSIMVIFRGSDPFYTVAFSPDGKHILSATQY 698



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 63/190 (33%), Gaps = 28/190 (14%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ + +A  ++D    +RV+   T        + +      +  FS +G+   IS  
Sbjct: 836  AFSPDGRYIASGSWD--KTVRVWNALTGQSVLDS-LTSHTHQFHSVSFSPDGRFI-ISGS 891

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            +D  + ++   +  +  + L        S  +SPD   IV          L +       
Sbjct: 892  EDRTITVWDTLMGQSIMKPLRGHNNQVNSVFFSPDGRYIV---------DLMI------- 935

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQ--A 394
               +S+   +      +SP G  I           I +     G       E       +
Sbjct: 936  --ELSEWHASYVTSVAFSPDGRYIVSGSHDKT---IRLWDTLTGYSLGDPFEGHYDGVLS 990

Query: 395  PTWSPSGRSL 404
              +SP GR +
Sbjct: 991  VVFSPDGRHI 1000



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 69/225 (30%), Gaps = 38/225 (16%)

Query: 106  LGAQVLVTGRVIKEGKDRLRVE------FRLWDVKD------RKQIIGKKFFSSPASWRK 153
             G   +VT  V+     R           R+WD          + I    +  +   W  
Sbjct: 800  RGHDKMVT-SVVFSSDGRYIASGSHDCTVRVWDALTVAFSPDGRYIASGSWDKTVRVWNA 858

Query: 154  IAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRD-GANIRYLTPSRD 211
            +       +  S+T     F+S         ++SG    ++ V D   G +I       +
Sbjct: 859  LTGQ---SVLDSLTSHTHQFHSVSFSPDGRFIISGSEDRTITVWDTLMGQSIMKPLRGHN 915

Query: 212  QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              +    FSP+ + +                    D   +      S + +  FS +G+ 
Sbjct: 916  NQVNSVFFSPDGRYIV-------------------DLMIELSEWHASYVTSVAFSPDGRY 956

Query: 272  ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             + S   D+ + ++      +  +         +S  +SPD   I
Sbjct: 957  IV-SGSHDKTIRLWDTLTGYSLGDPFEGHYDGVLSVVFSPDGRHI 1000


>gi|148656255|ref|YP_001276460.1| hypothetical protein RoseRS_2129 [Roseiflexus sp. RS-1]
 gi|148568365|gb|ABQ90510.1| hypothetical protein RoseRS_2129 [Roseiflexus sp. RS-1]
          Length = 487

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 73/203 (35%), Gaps = 50/203 (24%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D   +R+   R+   A   S++G    ++ + D+  DI+ V    +A  R+TN   I  S
Sbjct: 131 DANGERLLVDRAYEFAS--SADGNLIAVTRETDQ-FDIWIVSRDGSALRRITNDRDIESS 187

Query: 307 ASYSPDSSQIVFESDRE---------------GKEQLYVMQSNGSDQKRISQDKEASYFD 351
            S++PD S +VF +                  G  Q+ V+      ++ +++       D
Sbjct: 188 LSWAPDGSALVFAAADASEPLPQLWPDWALWCGASQVSVIDLASGQRQTLARG-----CD 242

Query: 352 PVWSPQGDLIAFT-------------------------KFSGEKFAIGVMKKDGSQERLL 386
           P  SP G  IA++                         +     +       DG+   L 
Sbjct: 243 PAVSPDGRRIAYSAPPTARDTGMAGGAPVFGNALRLINRRGENGWNFA--SADGADAPLP 300

Query: 387 VEDSNLQAPTWSPSGRSLIFSRK 409
                +  P WSP G S+ + R 
Sbjct: 301 NTGMLVYGPAWSPDGASVTYHRY 323



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/320 (15%), Positives = 102/320 (31%), Gaps = 58/320 (18%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGD-FNSRILFVSESVVSGIIKNSLCVMDRDGA 201
            F  +    R  A  + D   + +  ++   F S       +V     +  + ++ RDG+
Sbjct: 114 SFTGALIFLRDGALWLFDANGERLLVDRAYEFASSADGNLIAVTRETDQFDIWIVSRDGS 173

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-----NF 256
            +R +T  RD I     ++P+   + +A  D  + L     D  +     ++      + 
Sbjct: 174 ALRRITNDRD-IESSLSWAPDGSALVFAAADASEPLPQLWPDWALWCGASQVSVIDLASG 232

Query: 257 RSMILA----PRFSSNGKRALISV--QKDEAMDIYSVDLQSNATE--------------- 295
           +   LA    P  S +G+R   S      +        +  NA                 
Sbjct: 233 QRQTLARGCDPAVSPDGRRIAYSAPPTARDTGMAGGAPVFGNALRLINRRGENGWNFASA 292

Query: 296 -----RLTNTLFINISASYSPDSSQIVFESD--REGKEQLYVMQSNGS--DQKRISQDKE 346
                 L NT  +    ++SPD + + +      + +  + + +  GS   + R   +  
Sbjct: 293 DGADAPLPNTGMLVYGPAWSPDGASVTYHRYLGMQVEVDINLSEIGGSFEGKGRPFAEGA 352

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEK---------FAIGVMKKDGSQERLL----------- 386
                  ++  G   A  + +            +++ V+  DGS+   L           
Sbjct: 353 GWLLPVRFASDGRRAAIIEHNYSDARGFGGYDAWSVQVVTFDGSRTVDLPQGPMTMIGGS 412

Query: 387 -VEDSNLQAPTWSPSGRSLI 405
                   +  WSP G  L 
Sbjct: 413 ATRLPRAASAAWSPDGTRLA 432



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 98/302 (32%), Gaps = 71/302 (23%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +G F   ++F+           +L + D +G   R L     +       S +   +A
Sbjct: 110 PSEGSFTGALIFL--------RDGALWLFDANGE--RLLVDRAYEFAS----SADGNLIA 155

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--------- 278
                + D   ++++ +R   A +RI N R +  +  ++ +G   + +            
Sbjct: 156 VT--RETDQFDIWIV-SRDGSALRRITNDRDIESSLSWAPDGSALVFAAADASEPLPQLW 212

Query: 279 ------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES------------ 320
                   A  +  +DL S   + L          + SPD  +I + +            
Sbjct: 213 PDWALWCGASQVSVIDLASGQRQTLARG----CDPAVSPDGRRIAYSAPPTARDTGMAGG 268

Query: 321 -----------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                      +R G+       ++G+D      +     + P WSP G  + + ++ G 
Sbjct: 269 APVFGNALRLINRRGENGWNFASADGADAPL--PNTGMLVYGPAWSPDGASVTYHRYLGM 326

Query: 370 KFA--IGVMKKDG---SQERLLVEDSNLQAPT-WSPSGRSLIF----SRKKDGDTGSKLY 419
           +    I + +  G    + R   E +    P  ++  GR             G  G   +
Sbjct: 327 QVEVDINLSEIGGSFEGKGRPFAEGAGWLLPVRFASDGRRAAIIEHNYSDARGFGGYDAW 386

Query: 420 SI 421
           S+
Sbjct: 387 SV 388



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 71/141 (50%), Gaps = 26/141 (18%)

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R+G   L++  +NG   +R+  D+    ++   S  G+LIA T+ +  +F I ++ +DGS
Sbjct: 123 RDGA--LWLFDANG---ERLLVDR---AYEFASSADGNLIAVTRETD-QFDIWIVSRDGS 173

Query: 382 QERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLY-------------SIDL-NGR 426
             R +  D ++++  +W+P G +L+F+     +   +L+              IDL +G+
Sbjct: 174 ALRRITNDRDIESSLSWAPDGSALVFAAADASEPLPQLWPDWALWCGASQVSVIDLASGQ 233

Query: 427 NETLINT--PAYASDPQWVGF 445
            +TL     PA + D + + +
Sbjct: 234 RQTLARGCDPAVSPDGRRIAY 254



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 65/210 (30%), Gaps = 52/210 (24%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +   +D A+ ++  D      ERL          + S D + I    + + +  ++++ 
Sbjct: 118 ALIFLRDGALWLF--DANG---ERLLVDRAY--EFASSADGNLIAVTRETD-QFDIWIVS 169

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---------------EKFAIGVMK 377
            +GS  +RI+ D++       W+P G  + F                        + V+ 
Sbjct: 170 RDGSALRRITNDRD-IESSLSWAPDGSALVFAAADASEPLPQLWPDWALWCGASQVSVID 228

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-----------------------KKDGDT 414
               Q + L        P  SP GR + +S                         + G+ 
Sbjct: 229 LASGQRQTLARG---CDPAVSPDGRRIAYSAPPTARDTGMAGGAPVFGNALRLINRRGEN 285

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           G        +G +  L NT      P W  
Sbjct: 286 GWN--FASADGADAPLPNTGMLVYGPAWSP 313


>gi|94970395|ref|YP_592443.1| WD-40-like beta propeller repeat-containing protein [Candidatus
           Koribacter versatilis Ellin345]
 gi|94552445|gb|ABF42369.1| WD40-like beta Propeller [Candidatus Koribacter versatilis
           Ellin345]
          Length = 496

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 85/233 (36%), Gaps = 20/233 (8%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RIL+V +         +L   D +  + + L    D  +    +    + +   +     
Sbjct: 84  RILYVRQHSSLEGPTGALESRDLNAGDPQVLL--SDLRVTFATYEQPGRIIFSMSEAPPR 141

Query: 236 ILRVYLMDTRID-------RAPKRIGNFRSMILAPRF--SSNGKRALISVQKDEAMDIYS 286
                L + R +         P+++ N+        F  +S+G   +  +       +Y 
Sbjct: 142 QYERNLYELRYNVDTGKPKGKPQQLTNWNGYSFT-DFHATSDGNHFVF-LNGKLESAVYL 199

Query: 287 VDLQSNA-----TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            +L +N       +RLT    IN   S+SPD   IVF S+R+G   +YV        + +
Sbjct: 200 AELGNNNTELKAPQRLTLNAAINWFGSWSPDGKNIVFTSNRDGNYNIYVQGIQERSPRAL 259

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           +   E     PV SP G  + + ++  +  A  +    G   R+ +     + 
Sbjct: 260 ASGPE-EQLSPVVSPDGKWVLYVQW-PKVVAPKLTVTGGKVMRVPIAGGAPEF 310



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 54/293 (18%), Positives = 110/293 (37%), Gaps = 40/293 (13%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            S      +  + ++   GA+++ L        F+   SP+  ++ Y       I  +  
Sbjct: 1   MSGPVAQERQGVYMISVIGASLKKLRDD----AFQASLSPDGSQIVYLDSVKRSIGIMNS 56

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----KDEAMDIYSVDLQSNATERL 297
             ++     K  G +R  +  P + SNGKR L   Q    +     + S DL +   + L
Sbjct: 57  DGSQAHDFLKPEGGYR--LFGPTWISNGKRILYVRQHSSLEGPTGALESRDLNAGDPQVL 114

Query: 298 TNTLFINISASYSPDSSQIVFESD---REGKEQLYVMQSN------GSDQKRISQDKEAS 348
            + L +   A+Y      I   S+   R+ +  LY ++ N          ++++     S
Sbjct: 115 LSDLRV-TFATYEQPGRIIFSMSEAPPRQYERNLYELRYNVDTGKPKGKPQQLTNWNGYS 173

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--------ERLLVEDSNLQAPTWSPS 400
           + D   +  G+   F      K    V   +           +RL +  +     +WSP 
Sbjct: 174 FTDFHATSDGNHFVFL---NGKLESAVYLAELGNNNTELKAPQRLTLNAAINWFGSWSPD 230

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGFM 446
           G++++F+  +DG     +Y   +  R+   +        +P  + D +WV ++
Sbjct: 231 GKNIVFTSNRDG--NYNIYVQGIQERSPRALASGPEEQLSPVVSPDGKWVLYV 281



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 89/253 (35%), Gaps = 32/253 (12%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              I +   +SP+ + + + +  D +   +Y+   + +R+P+ + +     L+P  S +G
Sbjct: 218 NAAINWFGSWSPDGKNIVFTSNRDGN-YNIYVQGIQ-ERSPRALASGPEEQLSPVVSPDG 275

Query: 270 KRALIS---------VQKDEAMDIYSVDLQSNATERLTNTLF---INISA----SYSPD- 312
           K  L           +       +  V +   A E + +      ++       +  P+ 
Sbjct: 276 KWVLYVQWPKVVAPKLTVTGG-KVMRVPIAGGAPEFVMDVKGSFTLDSDPITIITSIPNI 334

Query: 313 -----SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKF 366
                   +V ES   G             +K   +      F     SP G  +A T+F
Sbjct: 335 RCPLNGDCLVAESGDTGLT-FSAFDPTQGRKKEFGKAPGVPDFMGWNISPDGTQVATTEF 393

Query: 367 SGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +   + ++    +  +       + L   +WS  G+SL          G+ +   DL 
Sbjct: 394 DYKVGKVQIVAAGSATPQKFSSGEWAQLNGVSWSSDGKSLFLLSYSS--RGTAVVHSDLT 451

Query: 425 GRNETLINTPAYA 437
           G + T++  P++ 
Sbjct: 452 G-HATMLYRPSWD 463



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 54/153 (35%), Gaps = 8/153 (5%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRD---GAN---IRYLTPSRDQILFEPRFSPNQQKVAY 228
            RI+F          + +L  +  +   G      + LT        +   + +     +
Sbjct: 129 GRIIFSMSEAPPRQYERNLYELRYNVDTGKPKGKPQQLTNWNGYSFTDFHATSDGNHFVF 188

Query: 229 ATYDDEDILRVYLMDTRID--RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                E  + +  +       +AP+R+    ++     +S +GK  + +  +D   +IY 
Sbjct: 189 LNGKLESAVYLAELGNNNTELKAPQRLTLNAAINWFGSWSPDGKNIVFTSNRDGNYNIYV 248

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             +Q  +   L +     +S   SPD   +++ 
Sbjct: 249 QGIQERSPRALASGPEEQLSPVVSPDGKWVLYV 281



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 81/253 (32%), Gaps = 30/253 (11%)

Query: 185 VSGIIKNSLCVMDRDG-ANI---------RYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            S   KN +   +RDG  NI              S  +    P  SP+ + V Y  +   
Sbjct: 227 WSPDGKNIVFTSNRDGNYNIYVQGIQERSPRALASGPEEQLSPVVSPDGKWVLYVQWPKV 286

Query: 235 DILRVYLMDTRI------DRAPKRIGNFRS-----------MILAPRFS-SNGKRALISV 276
              ++ +   ++        AP+ + + +            +   P          L++ 
Sbjct: 287 VAPKLTVTGGKVMRVPIAGGAPEFVMDVKGSFTLDSDPITIITSIPNIRCPLNGDCLVAE 346

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY--SPDSSQIVFESDREGKEQLYVMQSN 334
             D  +   + D      +       +     +  SPD +Q+          ++ ++ + 
Sbjct: 347 SGDTGLTFSAFDPTQGRKKEFGKAPGVPDFMGWNISPDGTQVATTEFDYKVGKVQIVAAG 406

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            +  ++ S  + A      WS  G  +    +S    A+      G    L     ++ A
Sbjct: 407 SATPQKFSSGEWAQLNGVSWSSDGKSLFLLSYSSRGTAVVHSDLTGHATMLYRPSWDIWA 466

Query: 395 PTWSPSGRSLIFS 407
              SP G++L F+
Sbjct: 467 VQPSPDGKTLAFA 479


>gi|315644668|ref|ZP_07897799.1| hypothetical protein PVOR_03968 [Paenibacillus vortex V453]
 gi|315279927|gb|EFU43226.1| hypothetical protein PVOR_03968 [Paenibacillus vortex V453]
          Length = 466

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 82/232 (35%), Gaps = 31/232 (13%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            PRF+   + +   +  DE+    YL+DT   +    +       L    + +G +   +
Sbjct: 157 NPRFAGAGKLI--VSKSDENGRTDYLVDTTSGKFELLLTTSGGSDL--VVAPSGNQVAYT 212

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D    +Y +DL S A+ ++TN   I     +S D S I F    +G     +  ++G
Sbjct: 213 ---DAEGAVYVLDLNSKASRQITNDNSIKPELVWSADGSAIYFLQGDKGTVIAKLSLADG 269

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFT---------------------KFSGEKFAIG 374
           S  K + +DK     +   S  G    +T                      FS  +  I 
Sbjct: 270 SIAKLV-EDKVDYKENLSVSADGKKFIYTVTTLGTVTSDTTNIDEDNVSIDFSSNQQQIF 328

Query: 375 VMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               DGS+     L   S+ +    S  G    +      D  + L S+D +
Sbjct: 329 SFNIDGSKPEAVKLTTTSDDKVFVLSTDGLKAYYVSVPSTDDQATLLSVDAS 380



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 87/243 (35%), Gaps = 33/243 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P+  +VAY   +      VY++D    +A ++I N  S+     +S++G      +Q D
Sbjct: 203 APSGNQVAYTDAEG----AVYVLDLN-SKASRQITNDNSIKPELVWSADGSAIYF-LQGD 256

Query: 280 EAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFE--------SD--------- 321
           +   I  + L   +  +L         + S S D  + ++         SD         
Sbjct: 257 KGTVIAKLSLADGSIAKLVEDKVDYKENLSVSADGKKFIYTVTTLGTVTSDTTNIDEDNV 316

Query: 322 ----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                  ++Q++    +GS  + +     +     V S  G    +           ++ 
Sbjct: 317 SIDFSSNQQQIFSFNIDGSKPEAVKLTTTSDDKVFVLSTDGLKAYYVSVPSTDDQATLLS 376

Query: 378 KDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPA 435
            D SQ    +  D +++    S     +++      D+ S +YSID   G+   L    A
Sbjct: 377 VDASQKAANVFADYDVEQAILS---GGVLYVLAAQDDSNSVIYSIDTATGKQTKLYTVSA 433

Query: 436 YAS 438
             S
Sbjct: 434 DVS 436



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 36/103 (34%), Gaps = 13/103 (12%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           +P ++  G LI        +    V    G  E LL           +PSG  + ++   
Sbjct: 157 NPRFAGAGKLIVSKSDENGRTDYLVDTTSGKFELLLTTSGGSDLVV-APSGNQVAYT--- 212

Query: 411 DGDTGSKLYSIDLNGRNETLINTP-------AYASDPQWVGFM 446
             D    +Y +DLN +    I           +++D   + F+
Sbjct: 213 --DAEGAVYVLDLNSKASRQITNDNSIKPELVWSADGSAIYFL 253


>gi|67541593|ref|XP_664564.1| hypothetical protein AN6960.2 [Aspergillus nidulans FGSC A4]
 gi|40738412|gb|EAA57602.1| hypothetical protein AN6960.2 [Aspergillus nidulans FGSC A4]
 gi|259480577|tpe|CBF71837.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 1878

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 95/274 (34%), Gaps = 24/274 (8%)

Query: 164 QSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           Q +     D    ++F  +S    SG    ++ + +     +R+     +  +    F+ 
Sbjct: 340 QRMLKGHNDSVRSVVFSHDSRLIASGSNDRTVRIWETTTGLLRHTFEDHEDSVMAVSFAH 399

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + +++A A+    D   V + DTR       +      + +  FS +  R L S   D  
Sbjct: 400 DSRRLASAS----DGGNVKIWDTRTGSLQNVLEGHDDCVNSVSFSPD-SRLLASASDDRT 454

Query: 282 MDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + I+     + + +R L        S  +S DS  I   SD      + +  +     + 
Sbjct: 455 VKIW--HAATGSLQRTLEGHNDWVRSVVFSHDSRLIASASD---DMTVKIWDTATVPLQN 509

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWS 398
             +  +      V+S    L+A      +   + +           +E  +    + ++S
Sbjct: 510 NLESHDNWVRSVVFSHDSRLLASAS---DDMTVKIWDTATGSLENTLEGHDDRVNSVSFS 566

Query: 399 PSGRSLIFSRKKD------GDTGSKLYSIDLNGR 426
           P  R L  +            TG+  ++ D +GR
Sbjct: 567 PDSRLLASASDDGTVKIWYAATGTVQHTFDGSGR 600



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 78/236 (33%), Gaps = 19/236 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               D+ +    FS + + +A A+ D      V + DT        +      + +  FS
Sbjct: 259 FKGHDRAVGSVSFSHDSRLLASASGDG----TVKIWDTATSFLQNTLEGHNEWVKSVVFS 314

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
            +  R L S   D  + I+  D  +   +R L        S  +S DS  I   S+    
Sbjct: 315 HD-SRLLASASDDGTVKIW--DTATGTLQRMLKGHNDSVRSVVFSHDSRLIASGSN---D 368

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + + ++     +   +D E S     ++     +A +   G    I          + 
Sbjct: 369 RTVRIWETTTGLLRHTFEDHEDSVMAVSFAHDSRRLA-SASDGGNVKIW--DTRTGSLQN 425

Query: 386 LVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           ++E  +    + ++SP  R L  +     D   K++         TL     +   
Sbjct: 426 VLEGHDDCVNSVSFSPDSRLLASASD---DRTVKIWHAATGSLQRTLEGHNDWVRS 478



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 73/194 (37%), Gaps = 14/194 (7%)

Query: 143 KFFSSPASWR--KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           +  +S +  R  KI H  +    Q       D+   ++F  +S +     + + V   D 
Sbjct: 444 RLLASASDDRTVKIWH-AATGSLQRTLEGHNDWVRSVVFSHDSRLIASASDDMTVKIWDT 502

Query: 201 ANI--RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           A +  +    S D  +    FS + + +A A+ D      V + DT        +     
Sbjct: 503 ATVPLQNNLESHDNWVRSVVFSHDSRLLASASDDM----TVKIWDTATGSLENTLEGHDD 558

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIV 317
            + +  FS +  R L S   D  + I+     +   +   +    + IS ++S  S+ + 
Sbjct: 559 RVNSVSFSPD-SRLLASASDDGTVKIWY--AATGTVQHTFDGSGRVAISLAFSHTSNLLA 615

Query: 318 FESDREGKEQLYVM 331
              D +G  +++ M
Sbjct: 616 SAMD-DGTVKIWDM 628


>gi|213581939|ref|ZP_03363765.1| translocation protein TolB [Salmonella enterica subsp. enterica
          serovar Typhi str. E98-0664]
          Length = 73

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 13 MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
          M      +       +   +HA V++       +  P+ +   K+         +  +V+
Sbjct: 1  MMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVA 60

Query: 71 KDLQRSDVFNLIS 83
           DL+ S  FN + 
Sbjct: 61 ADLRNSGKFNPLD 73


>gi|294506953|ref|YP_003571011.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Salinibacter
           ruber M8]
 gi|294343281|emb|CBH24059.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Salinibacter
           ruber M8]
          Length = 898

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 55/184 (29%), Gaps = 9/184 (4%)

Query: 218 RFSPNQQKVAYATYDDEDI------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             SP  + VAY               R+Y+  T     P+ +   +  I  P +  +G  
Sbjct: 64  ALSPRGRSVAYTVRRLSPGQAPTPRARLYVARTSGRDDPRLLFQDKHDIREPAWHPDGTH 123

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                  +    ++ + L      RLT+T     +  + PD  +++F S      +  V 
Sbjct: 124 LAFVRPVNGTPQVFVIPLNGGVPYRLTDTPHGAQAPQWGPDGERLLFASH---VPEPAVR 180

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           +            + AS       P   L+     +        +  DG  +        
Sbjct: 181 RQTARRPPTERPGRTASDTIRTPPPDTLLVLRHDRTLRPVDTLAVDADGRPQTPTDTTDT 240

Query: 392 LQAP 395
           L  P
Sbjct: 241 LHVP 244



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 8/113 (7%)

Query: 305 ISASYSPDSSQIVFESDR-------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              + SP    + +   R         + +LYV +++G D  R+    +    +P W P 
Sbjct: 61  TEVALSPRGRSVAYTVRRLSPGQAPTPRARLYVARTSGRDDPRLLFQDKHDIREPAWHPD 120

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRK 409
           G  +AF +       + V+  +G     L +  +  QAP W P G  L+F+  
Sbjct: 121 GTHLAFVRPVNGTPQVFVIPLNGGVPYRLTDTPHGAQAPQWGPDGERLLFASH 173



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 12/102 (11%)

Query: 353 VWSPQGDLIAFTKFS-------GEKFAIGVMKKDGSQ-ERLLVED-SNLQAPTWSPSGRS 403
             SP+G  +A+T            +  + V +  G    RLL +D  +++ P W P G  
Sbjct: 64  ALSPRGRSVAYTVRRLSPGQAPTPRARLYVARTSGRDDPRLLFQDKHDIREPAWHPDGTH 123

Query: 404 LIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVG 444
           L F R  +G    +++ I LNG     L +TP  A  PQW  
Sbjct: 124 LAFVRPVNGT--PQVFVIPLNGGVPYRLTDTPHGAQAPQWGP 163



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 51/138 (36%), Gaps = 16/138 (11%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQD 344
               LT        A + P   Q+V           DR  +  LYV   N    +R+ + 
Sbjct: 356 TPRLLTGGYRSYGQADWLPGGEQVVVSGMPATNGSPDRVRRRNLYVADLNTPRLRRLLRI 415

Query: 345 KEASYFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDG-SQERLLVE--DSNLQAPT 396
           +  +   P  +  G  +AF        S     IG+   DG SQ R+L    D ++ + T
Sbjct: 416 ENHTLTSPSVTTDGSTVAFRVESLAPSSDAPAEIGLFALDGRSQPRILTSAFDRDVTSVT 475

Query: 397 WSPSGRSLIFSRKKDGDT 414
           W+P G  L  +   +G  
Sbjct: 476 WAPDGWYLYTTAPSEGGR 493



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 42/116 (36%), Gaps = 2/116 (1%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           ++ +     +G   +  +       +   +  L V    G +   L       + EP + 
Sbjct: 59  EVTEVALSPRGRSVAYTVRRLSPGQAPTPRARLYVARTSGRDDPRLLFQDKHDIREPAWH 118

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P+   +A+         +V+++       P R+ +      AP++  +G+R L + 
Sbjct: 119 PDGTHLAFVR-PVNGTPQVFVIPLN-GGVPYRLTDTPHGAQAPQWGPDGERLLFAS 172



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 55/185 (29%), Gaps = 19/185 (10%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--------QK 278
            Y  +   D+             P+ +           +   G++ ++S          +
Sbjct: 334 TYRHHYVVDLPVGIRSGRPPRPTPRLLTGGYRSYGQADWLPGGEQVVVSGMPATNGSPDR 393

Query: 279 DEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQ 332
               ++Y  DL +    RL         S S + D S + F  +      +   ++ +  
Sbjct: 394 VRRRNLYVADLNTPRLRRLLRIENHTLTSPSVTTDGSTVAFRVESLAPSSDAPAEIGLFA 453

Query: 333 SNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            +G  Q RI +   +       W+P G  +  T  S     +               D  
Sbjct: 454 LDGRSQPRILTSAFDRDVTSVTWAPDGWYLYTTAPSEGGRPLFRFTP----FAQDTTDGA 509

Query: 392 LQAPT 396
            QAP+
Sbjct: 510 PQAPS 514



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 47/143 (32%), Gaps = 14/143 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRIGNFR 257
            L     +   +  + P  ++V  +     +          +Y+ D    R  + +    
Sbjct: 358 RLLTGGYRSYGQADWLPGGEQVVVSGMPATNGSPDRVRRRNLYVADLNTPRLRRLLRIEN 417

Query: 258 SMILAPRFSSNGKRALISV-----QKDEAMDIYSVDLQSNATER-LTNTLFIN-ISASYS 310
             + +P  +++G      V       D   +I    L   +  R LT+    +  S +++
Sbjct: 418 HTLTSPSVTTDGSTVAFRVESLAPSSDAPAEIGLFALDGRSQPRILTSAFDRDVTSVTWA 477

Query: 311 PDSSQIVFESDREGKEQLYVMQS 333
           PD   +   +  EG   L+    
Sbjct: 478 PDGWYLYTTAPSEGGRPLFRFTP 500


>gi|297200300|ref|ZP_06917697.1| protease [Streptomyces sviceus ATCC 29083]
 gi|197709414|gb|EDY53448.1| protease [Streptomyces sviceus ATCC 29083]
          Length = 1069

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 83/266 (31%), Gaps = 25/266 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +   DG    +        +  PRFSP+ + +AY ++    +  ++L D       +
Sbjct: 21  DLWLATLDGPGRAWRLTVDRTKVGHPRFSPDGRHIAYTSWRT-LVPEIHLADVD-GGPGR 78

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQKDE---AMDIYSVDLQSNATERLTNTLFINISA 307
           R+  + S       +S+ G    ++   +        Y V    +   +L      +I  
Sbjct: 79  RLTYWGSADTQVCGWSAQGTILAVASHGEPFSYFTWAYKVPTDGSPGRKLPWGPVSDIQ- 137

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA---SYFDPVWSP--QGDLIA 362
               D   ++       +   +  +  G    R+    E         + SP   GD IA
Sbjct: 138 --VADRKTLLLTGTPPHEPAAWK-RYRGGATGRLWLHGERLLEGLGGHLHSPMFVGDRIA 194

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           F         +    +DGS  R   +     A   S  G  +++        G  L+ +D
Sbjct: 195 FLSDHEGVGNLYSCAQDGSDLRRHTDHDAFYARHASSDGTRVVY------QCGGDLWIVD 248

Query: 423 LNGRNET----LINTPAYASDPQWVG 444
                       ++ P     P  V 
Sbjct: 249 DLSAEARKLDVRLSGPRAGRRPYQVP 274



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S  G       + D  + + ++D    A  RLT          +SPD   I + S R
Sbjct: 7   PHLS--GDLLCFVAEDD--LWLATLDGPGRAW-RLTVDRTKVGHPRFSPDGRHIAYTSWR 61

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI----GVMKK 378
               ++++   +G   +R++    A      WS QG ++A     GE F+       +  
Sbjct: 62  TLVPEIHLADVDGGPGRRLTYWGSADTQVCGWSAQGTILAVASH-GEPFSYFTWAYKVPT 120

Query: 379 DGSQERLL 386
           DGS  R L
Sbjct: 121 DGSPGRKL 128



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 66/182 (36%), Gaps = 13/182 (7%)

Query: 271 RALISVQKDE--AMDIYSVDLQSN--ATERLTNTL-FINISASYSPDSSQIVFESDREGK 325
           +       +   A++I  +   +   A  RL +      +     P   ++   S     
Sbjct: 331 QVAYVTDAEGEDAVEIAYLPRATGDRAPRRLASGELGRVLELVSDPRGERLAIASHDGRL 390

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             L   + +  +   + +       D  +SP G  + ++   G   ++  +K    ++RL
Sbjct: 391 LLLDATEDSDEEVTELIRSVNGPVRDLAFSPDGTWLTWSH-PGIGRSLRQIKMARIKDRL 449

Query: 386 LVEDSN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYAS 438
           +V+ +N     + P ++  GR L F   +  D    +++ DL+   G    L+   +   
Sbjct: 450 IVDVTNGRFEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATP 509

Query: 439 DP 440
            P
Sbjct: 510 SP 511



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 9/124 (7%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              + F ++    + L++   +G  +  R++ D+      P +SP G  IA+T +     
Sbjct: 11  GDLLCFVAE----DDLWLATLDGPGRAWRLTVDR-TKVGHPRFSPDGRHIAYTSWRTLVP 65

Query: 372 AIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNE 428
            I +   DG   R L     ++ Q   WS  G  L  +   +     +  Y +  +G   
Sbjct: 66  EIHLADVDGGPGRRLTYWGSADTQVCGWSAQGTILAVASHGEPFSYFTWAYKVPTDGSPG 125

Query: 429 TLIN 432
             + 
Sbjct: 126 RKLP 129



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 3/89 (3%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           L  S +  + +  FSP+   + ++       LR   M    DR    + N R     P F
Sbjct: 406 LIRSVNGPVRDLAFSPDGTWLTWSHPGIGRSLRQIKMARIKDRLIVDVTNGRFEDENPVF 465

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           + +G+       +         D+ +   
Sbjct: 466 TRDGRYLAFLSWRGFDP---VYDVHTGDL 491


>gi|171677728|ref|XP_001903815.1| hypothetical protein [Podospora anserina S mat+]
 gi|154936838|emb|CAL30215.1| HET-E [Podospora anserina]
 gi|170936932|emb|CAP61591.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1062

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 76/223 (34%), Gaps = 21/223 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQQKV--AYATYDDED 235
              I+  L  + RDG   R+    R  I   P         F+P    +   +   +   
Sbjct: 762 GHTIRGRLIAIVRDGY--RFALSYRMIIEKAPLQAYTSALVFAPTDSMIKKIFKKEEPGW 819

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           I  + +++   +   + +    S +L+  FS +G+R   S   D+ + I+  D  S    
Sbjct: 820 ISTISVVEAEWNACTQTLEGHGSSVLSVAFSPDGQRVA-SGSGDKTIKIW--DTASGTGT 876

Query: 296 R-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           + L        S ++SPD  ++   S       + +  +      +  +          +
Sbjct: 877 QTLEGHGGSVWSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVHSVAF 933

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           SP G  +A +  S     I      G+  + L   S     ++
Sbjct: 934 SPDGQRVA-SGSSDNTIKIW-DTASGTCTQTLNVGSTATCLSF 974



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  +A     
Sbjct: 848 AFSPDGQRVASGS---GDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVASGSID 904

Query: 368 GEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G    I +           +E     + +  +SP G+ +        D   K++      
Sbjct: 905 GT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA---SGSSDNTIKIWDTASGT 958

Query: 426 RNETL 430
             +TL
Sbjct: 959 CTQTL 963



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 7/115 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 854 QRVASGSGDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVASGSIDG----TIKI 909

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            D       + +      + +  FS +G+R   S   D  + I+  D  S    +
Sbjct: 910 WDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSSDNTIKIW--DTASGTCTQ 961


>gi|291568259|dbj|BAI90531.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 1598

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 22/268 (8%)

Query: 162  IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            I      ++  ++ +    S+ + S    N++ + + DG  +       ++ +    FS 
Sbjct: 1156 INSFQGHDQAIWSVKFSPDSQILASASNDNTVKLWNPDGT-LSTTLTGHEKSVNSVNFSA 1214

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + + +  A+ D    L  Y           R    +++     F+ + +   IS   D +
Sbjct: 1215 DGRLIVTASTDTTIKLWNYEGILVSTLRGHRNTVNQAI-----FTPDSQTL-ISASADGS 1268

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            +  + +        R+  +     +A +SP+S  I   S         + ++N  + + +
Sbjct: 1269 IRFWGL----QNLPRVWESPSDIYNAIFSPNSELIASVSS---NNMAIIWETNSLNIRLM 1321

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
              +   +  +  +SP   LIA          + +   +G   R +  D  +   ++SP G
Sbjct: 1322 FDEHTDTVNNISFSPDSQLIASASNDKT---VKIWNTEGDVLRTINHDFPVWTVSFSPDG 1378

Query: 402  RSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + +        D   +L+  DLNG  ET
Sbjct: 1379 QKIASVSD---DQIIRLW--DLNGVLET 1401



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 99/283 (34%), Gaps = 24/283 (8%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            D  QI+      +   W +    I   +       +  F+         + S     ++ 
Sbjct: 1006 DGDQIVSGDQDGTIRIWNQNRELIGSWLANKRKIRRVVFSPHSSSQQSIIASAGEDENIK 1065

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            +   DG  I  L      I +   FSP+ Q++A  + D     R   + +R       + 
Sbjct: 1066 LWRPDGTLINTLIGHTSDIQWL-SFSPDGQQLASGSED-----RTIRLWSRDGDTIAILT 1119

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSP 311
               + +L+  FS + ++ ++S  +   + ++     +   E + +    +    S  +SP
Sbjct: 1120 GHEAEVLSVSFSPD-EQLIVSSDEMGVIKLW-----NRQGELINSFQGHDQAIWSVKFSP 1173

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            DS  +   S+      + +   +G+    ++   E S     +S  G LI          
Sbjct: 1174 DSQILASASN---DNTVKLWNPDGTLSTTLT-GHEKSVNSVNFSADGRLIVTASTDTT-- 1227

Query: 372  AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGD 413
             I +   +G     L    N +    ++P  ++LI S   DG 
Sbjct: 1228 -IKLWNYEGILVSTLRGHRNTVNQAIFTPDSQTLI-SASADGS 1268



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 87/237 (36%), Gaps = 25/237 (10%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPR------FSPNQQKVAYATYDDEDILRVYLMDTR 245
            +L     DG+   +   +  ++   P       FSPN + +A  + ++       + +T 
Sbjct: 1259 TLISASADGSIRFWGLQNLPRVWESPSDIYNAIFSPNSELIASVSSNN----MAIIWETN 1314

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                          +    FS + +    S   D+ + I+  + + +    + N  F   
Sbjct: 1315 SLNIRLMFDEHTDTVNNISFSPDSQLIA-SASNDKTVKIW--NTEGDVLRTI-NHDFPVW 1370

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            + S+SPD  +I   SD    + + +   NG  +  +    +    D  ++    ++A   
Sbjct: 1371 TVSFSPDGQKIASVSD---DQIIRLWDLNGVLETTLIGHTDR-INDIDFNQPAKIMASV- 1425

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                +  I +   +GS  R L   S+     +SP+G  L  +    GD   KL++  
Sbjct: 1426 ---GENTIKIWDINGSLIRDLSHGSHFSKVAFSPNGTLLAVAT---GDGSVKLWNTS 1476



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 23/158 (14%)

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ--- 332
            +++  A  ++ V+      +RL+ +    +S S +PD  QIV   D++G  +++      
Sbjct: 970  IERRTASSLWEVNNIFRERDRLSESFGGILSVSVNPDGDQIV-SGDQDGTIRIWNQNREL 1028

Query: 333  -----SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                 +N    +R+     +S    +             +GE   I + + DG+    L+
Sbjct: 1029 IGSWLANKRKIRRVVFSPHSSSQQSI----------IASAGEDENIKLWRPDGTLINTLI 1078

Query: 388  -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               S++Q  ++SP G+ L        D   +L+S D +
Sbjct: 1079 GHTSDIQWLSFSPDGQQLA---SGSEDRTIRLWSRDGD 1113


>gi|284051752|ref|ZP_06381962.1| WD-40 repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 1546

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 99/268 (36%), Gaps = 22/268 (8%)

Query: 162  IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            I      ++  ++ +    S+ + S    N++ + + DG  +       ++ +    FS 
Sbjct: 1104 INSFQGHDQAIWSVKFSPDSQILASASNDNTVKLWNPDGT-LSTTLTGHEKSVNSVNFSA 1162

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + + +  A+ D    L  Y           R    +++     F+ + +   IS   D +
Sbjct: 1163 DGRLIVTASTDTTIKLWNYEGILVSTLRGHRNTVNQAI-----FTPDSQTL-ISASADGS 1216

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            +  + +        R+  +     +A +SP+S  I   S         + ++N  + + +
Sbjct: 1217 IRFWGL----QNLPRVWESPSDIYNAIFSPNSELIASVSS---NNMAIIWETNSLNIRLM 1269

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
              +   +  +  +SP   LIA          + +   +G   R +  D  +   ++SP G
Sbjct: 1270 FDEHTDTVNNISFSPDSQLIASASNDKT---VKIWNTEGDVLRTINHDFPVWTVSFSPDG 1326

Query: 402  RSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + +        D   +L+  DLNG  ET
Sbjct: 1327 QKIASVSD---DQIIRLW--DLNGVLET 1349



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 99/283 (34%), Gaps = 24/283 (8%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            D  QI+      +   W +    I   +       +  F+         + S     ++ 
Sbjct: 954  DGDQIVSGDQDGTIRIWNQNRELIGSWLANKRKIRRVVFSPHSSSQQSIIASAGEDENIK 1013

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            +   DG  I  L      I +   FSP+ Q++A  + D     R   + +R       + 
Sbjct: 1014 LWRPDGTLINTLIGHTSDIQWL-SFSPDGQQLASGSED-----RTIRLWSRDGDTIAILT 1067

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSP 311
               + +L+  FS + ++ ++S  +   + ++     +   E + +    +    S  +SP
Sbjct: 1068 GHEAEVLSVSFSPD-EQLIVSSDEIGVIKLW-----NRQGELINSFQGHDQAIWSVKFSP 1121

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            DS  +   S+      + +   +G+    ++   E S     +S  G LI          
Sbjct: 1122 DSQILASASN---DNTVKLWNPDGTLSTTLT-GHEKSVNSVNFSADGRLIVTASTDTT-- 1175

Query: 372  AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGD 413
             I +   +G     L    N +    ++P  ++LI S   DG 
Sbjct: 1176 -IKLWNYEGILVSTLRGHRNTVNQAIFTPDSQTLI-SASADGS 1216



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 87/237 (36%), Gaps = 25/237 (10%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPR------FSPNQQKVAYATYDDEDILRVYLMDTR 245
            +L     DG+   +   +  ++   P       FSPN + +A  + ++       + +T 
Sbjct: 1207 TLISASADGSIRFWGLQNLPRVWESPSDIYNAIFSPNSELIASVSSNN----MAIIWETN 1262

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                          +    FS + +    S   D+ + I+  + + +    + N  F   
Sbjct: 1263 SLNIRLMFDEHTDTVNNISFSPDSQLIA-SASNDKTVKIW--NTEGDVLRTI-NHDFPVW 1318

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            + S+SPD  +I   SD    + + +   NG  +  +    +    D  ++    ++A   
Sbjct: 1319 TVSFSPDGQKIASVSD---DQIIRLWDLNGVLETTLIGHTDR-INDIDFNQPAKIMASV- 1373

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                +  I +   +GS  R L   S+     +SP+G  L  +    GD   KL++  
Sbjct: 1374 ---GENTIKIWDINGSLIRDLSHGSHFSKVAFSPNGTLLAVAT---GDGSVKLWNTS 1424



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 23/158 (14%)

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ--- 332
            +++  A  ++ V+      +RL+ +    +S S +PD  QIV   D++G  +++      
Sbjct: 918  IERRTASSLWEVNNIFRERDRLSESFGGILSVSVNPDGDQIV-SGDQDGTIRIWNQNREL 976

Query: 333  -----SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                 +N    +R+     +S    +             +GE   I + + DG+    L+
Sbjct: 977  IGSWLANKRKIRRVVFSPHSSSQQSI----------IASAGEDENIKLWRPDGTLINTLI 1026

Query: 388  -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               S++Q  ++SP G+ L        D   +L+S D +
Sbjct: 1027 GHTSDIQWLSFSPDGQQLA---SGSEDRTIRLWSRDGD 1061


>gi|255016534|ref|ZP_05288660.1| hypothetical protein B2_21716 [Bacteroides sp. 2_1_7]
          Length = 488

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 82/265 (30%), Gaps = 58/265 (21%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             T         P + P  + +AY+T +            + +R          ++  P 
Sbjct: 209 TKTDQTIAACVYPYWHPGGEYIAYSTNNTRQSF----HTVKDERVEVLDLESDIVVYHPA 264

Query: 265 FSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--- 320
              + +  L  S+QK +                           ++SPD   + F S   
Sbjct: 265 ---DHRLLLCDSLQKKDRF---------------------ETFPAFSPDGRTLYFCSAEA 300

Query: 321 ------DREGKEQLYVMQSN---GSDQKRISQDKEA-----SYFDPVWSPQGDLIAFTKF 366
                  +E +  L  +  +   G+   RI     A     S   P  S  G  I FT  
Sbjct: 301 KKIPEEYKEIRYNLCSIDFDPSAGTFGSRIDTLVNAEALGKSVSFPRPSYDGKYIMFTLS 360

Query: 367 SGEKFAIG-------VMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGS 416
               F+I        ++       R L E ++    +   WS + R  +FS ++     +
Sbjct: 361 DYGNFSIWHKEANLWLLDLTSGDLRELSEVNSDDTESFHNWSSNSRWFVFSSRRGDGLYT 420

Query: 417 KLY--SIDLNGRNETLINTPAYASD 439
            LY  S+D NG+       P    +
Sbjct: 421 HLYLASMDENGKISKPFLLPQEDPE 445



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 62/186 (33%), Gaps = 35/186 (18%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGN- 255
              +D+    P FSP+ + + + + + + I   Y            D        RI   
Sbjct: 274 LQKKDRFETFPAFSPDGRTLYFCSAEAKKIPEEYKEIRYNLCSIDFDPSAGTFGSRIDTL 333

Query: 256 -----FRSMILAPRFSSNGKRALISVQKDEAMDI-------YSVDLQSNATERLTNTLFI 303
                    +  PR S +GK  + ++       I       + +DL S     L+     
Sbjct: 334 VNAEALGKSVSFPRPSYDGKYIMFTLSDYGNFSIWHKEANLWLLDLTSGDLRELSEVNSD 393

Query: 304 NIS--ASYSPDSSQIVFESDREGK--EQLYV--MQSNGSDQKRIS---QDKEASYFDPVW 354
           +     ++S +S   VF S R       LY+  M  NG   K      +D E  Y   V+
Sbjct: 394 DTESFHNWSSNSRWFVFSSRRGDGLYTHLYLASMDENGKISKPFLLPQEDPETYYDRSVY 453

Query: 355 S---PQ 357
           S   P 
Sbjct: 454 SYNVPD 459


>gi|209526082|ref|ZP_03274614.1| WD-40 repeat protein [Arthrospira maxima CS-328]
 gi|209493470|gb|EDZ93793.1| WD-40 repeat protein [Arthrospira maxima CS-328]
          Length = 1729

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 86/224 (38%), Gaps = 20/224 (8%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                    +    +SP+ + +   + D    ++++  D    +  + I   +  +    F
Sbjct: 1486 TLVGHTDSVMTVTYSPDGEYILTGSKD--GTIKLWTAD---GQFLRTIRGHQEWVNQVSF 1540

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDR 322
            S +  R +IS   D  + ++  D  +   +RL          +  ++SPD   I      
Sbjct: 1541 SPD-SRTVISASDDGTLILWKWDPANTMLDRLKTIQAHESYVLGVNFSPDGKVIA---SA 1596

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGS 381
                 + +    G     + +    S    V+SP G L+A   +      + +    DG+
Sbjct: 1597 GYDNTVKLWTQEGVLLNTLLKGTSDSVTRVVFSPDGSLVASASYDS---HVRIWSAKDGT 1653

Query: 382  QERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              + L+   + + + T+SP GR+L  + +   D    L+++DL+
Sbjct: 1654 LLKTLMGHGDSVMSLTFSPDGRTLASASR---DHSVILWNLDLD 1694



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 91/290 (31%), Gaps = 48/290 (16%)

Query: 165  SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQ 223
                  GD  +R+ F  +            V   +   N R    S +  + +  FSP+ 
Sbjct: 1331 QTFRGHGDKVTRVRFSPDDRTLASSSYDKTVKLWNLHTNPRATLKSHNDRVLDVSFSPDG 1390

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            Q +A  + D      V L  +   +  + +      + +  FS NG+    +   D  + 
Sbjct: 1391 QILASGSQDT----TVKLWSS-SGKLLQTLSGHSDRVSSVSFSPNGEWLA-TASYDHTVK 1444

Query: 284  IY-SVDLQSNATE------RLTNTLFINISA----------------------SYSPDSS 314
            I+  ++ QS+ +       +L+    I +                        +YSPD  
Sbjct: 1445 IWKRLNPQSDLSRNWPSKLQLSKFNGIGVMPKSLFVPSPVATLVGHTDSVMTVTYSPDGE 1504

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             I+    ++G  +L+          R  +  +       +SP    +  +        + 
Sbjct: 1505 YIL-TGSKDGTIKLWTAD---GQFLRTIRGHQEWVNQVSFSPDSRTVI-SASDDGTLILW 1559

Query: 375  VMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYS 420
                  +    L      ++      +SP G+ +  +     D   KL++
Sbjct: 1560 KWDPANTMLDRLKTIQAHESYVLGVNFSPDGKVIASAGY---DNTVKLWT 1606



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 87/225 (38%), Gaps = 18/225 (8%)

Query: 190  KNSLCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
            +  +   ++ G  +  +T   +RD +++   FSPN Q +A  T   +  ++++   TR  
Sbjct: 1232 QGDVQFFNQQGRRLMSITHTKNRDSVIYAVNFSPNGQFIA--TSGTDGTVKLW---TRQG 1286

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
               + +     ++    FS +G+    +   D+ + ++S   +    +            
Sbjct: 1287 ELLRTLQVDEDIVFCVSFSGDGRTLATAGS-DKTVKVWS--WEGELLQTFRGHGDKVTRV 1343

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +SPD   +   S  +   +L+ +    ++ +   +       D  +SP G ++A     
Sbjct: 1344 RFSPDDRTLA-SSSYDKTVKLWNLH---TNPRATLKSHNDRVLDVSFSPDGQILASGSQD 1399

Query: 368  GEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
                 + +    G   + L   S+ + + ++SP+G  L  +    
Sbjct: 1400 TT---VKLWSSSGKLLQTLSGHSDRVSSVSFSPNGEWLATASYDH 1441



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G    ++ +   DG  +R +     + + +  FSP+ + V  A+ D   IL  +     
Sbjct: 1508 TGSKDGTIKLWTADGQFLRTI-RGHQEWVNQVSFSPDSRTVISASDDGTLILWKWDPANT 1566

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFI 303
            +    K I    S +L   FS +GK    S   D  + +++   Q        L  T   
Sbjct: 1567 MLDRLKTIQAHESYVLGVNFSPDGKVIA-SAGYDNTVKLWT---QEGVLLNTLLKGTSDS 1622

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                 +SPD S +   S       + +  +      +       S     +SP G  +A 
Sbjct: 1623 VTRVVFSPDGSLVASASY---DSHVRIWSAKDGTLLKTLMGHGDSVMSLTFSPDGRTLAS 1679

Query: 364  TKFSGEKFAIGVMKKDG 380
                     +  +  D 
Sbjct: 1680 ASRDHSVI-LWNLDLDS 1695



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 58/291 (19%), Positives = 101/291 (34%), Gaps = 47/291 (16%)

Query: 140  IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            +G+  +      R   H  +D ++  +    GD           + S    N++ +   +
Sbjct: 1071 LGQGVYGIHEQNRLEGH--ADIVWDVVYSPTGD----------MLASASTDNTIRLWTPE 1118

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G  I  LT     +     FS   Q +  A+ D               R  K +  F   
Sbjct: 1119 GKAIATLTGHNHNVTSL-DFSSCGQMLVSASDDH--------TVKLWSRDGKLLKTFIGH 1169

Query: 260  ---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE----RLTNTLFINISASYSPD 312
               + + RFS +GK    S   D  + ++  +LQ         R T   +IN    +SPD
Sbjct: 1170 TDRVKSVRFSPDGKMIA-SAGSDRTIRLW--NLQGEIIRTIRFRHTALTWIN----FSPD 1222

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEK 370
               +   ++ +G  Q +     G     I+  K      +   +SP G  IA T  +   
Sbjct: 1223 GEILAAAAN-QGDVQFF--NQQGRRLMSITHTKNRDSVIYAVNFSPNGQFIA-TSGTDGT 1278

Query: 371  FAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              +    + G   R L  D + +   ++S  GR+L        D   K++S
Sbjct: 1279 VKLWT--RQGELLRTLQVDEDIVFCVSFSGDGRTLA---TAGSDKTVKVWS 1324



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 66/199 (33%), Gaps = 16/199 (8%)

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            R+     ++    +S  G     S   D  + +++   +  A   LT       S  +S 
Sbjct: 1083 RLEGHADIVWDVVYSPTGDMLA-SASTDNTIRLWT--PEGKAIATLTGHNHNVTSLDFSS 1139

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                +V  SD    +    + S      +             +SP G +IA    +G   
Sbjct: 1140 CGQMLVSASD----DHTVKLWSRDGKLLKTFIGHTDRVKSVRFSPDGKMIA---SAGSDR 1192

Query: 372  AIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKD-----GDTGSKLYSIDLNG 425
             I +    G   R +    + L    +SP G  L  +  +         G +L SI    
Sbjct: 1193 TIRLWNLQGEIIRTIRFRHTALTWINFSPDGEILAAAANQGDVQFFNQQGRRLMSITHTK 1252

Query: 426  RNETLINTPAYASDPQWVG 444
              +++I    ++ + Q++ 
Sbjct: 1253 NRDSVIYAVNFSPNGQFIA 1271


>gi|67920075|ref|ZP_00513595.1| G-protein beta WD-40 repeat [Crocosphaera watsonii WH 8501]
 gi|67857559|gb|EAM52798.1| G-protein beta WD-40 repeat [Crocosphaera watsonii WH 8501]
          Length = 465

 Score = 76.2 bits (186), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 113/327 (34%), Gaps = 50/327 (15%)

Query: 120 GKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
             +R  +        RLWD +  ++I   +               S+ +Y     + G +
Sbjct: 139 PDERYLISAASDNTIRLWDRETGEEIKQMQQH-------------SNWVYSLACSKDGRW 185

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                 V+ +   GI    + + D             + ++    F P+ Q +   ++D 
Sbjct: 186 ------VAIAYSDGI----IHLWDIIKQREINCLEGHESVISSLAFCPDNQHLVSGSWDG 235

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-----D 288
                V + D    +  + +   ++ + +   S NG+    S   D+ + ++ +     +
Sbjct: 236 ----TVRVWDIHTRKCKRILQGHQNWVSSVAVSPNGEWVA-SGSWDKTVCLWEITNSWPN 290

Query: 289 LQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            + +   R+      +I   ++SPD+  I   S+    + + + +     Q +  +  + 
Sbjct: 291 FKGSKPTRILQGHLEDIEGVAFSPDNQLIASCSN---DKTIKIWEVASGQQVQQLEGHKY 347

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIF 406
           S  D V+SP G  IA            ++   G +  R     + +    +S  GR L  
Sbjct: 348 SVEDIVFSPDGQFIASVSRDKTVRVWHIIS--GKEIHRFQGHTNYVNCVAFSLEGRYLA- 404

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT 433
                 D    ++ + ++G    LI  
Sbjct: 405 --SGGKDKMIAIWDL-VSGELTQLIQG 428



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 57/314 (18%), Positives = 108/314 (34%), Gaps = 38/314 (12%)

Query: 120 GKDRLRVEFRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISDDI-------------- 162
                  + RLWDV      + + G + + +   + K A  ++                 
Sbjct: 59  ASGGRDKKIRLWDVTSGKFQQILEGHQDWVTALIFDKNADHLASASAINDKDICIWSLAQ 118

Query: 163 YQSITGEKGDFNS--RILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            Q     KGD NS   I F  +    +S    N++ + DR+              ++   
Sbjct: 119 RQKPQKLKGDSNSIQAIAFCPDERYLISAASDNTIRLWDRETGEEIKQMQQHSNWVYSLA 178

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S + + VA A  D      ++L D    R    +    S+I +  F  + +  + S   
Sbjct: 179 CSKDGRWVAIAYSDG----IIHLWDIIKQREINCLEGHESVISSLAFCPDNQHLV-SGSW 233

Query: 279 DEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVM-----Q 332
           D  + ++  D+ +   +R+         S + SP+   +   S  +    L+ +      
Sbjct: 234 DGTVRVW--DIHTRKCKRILQGHQNWVSSVAVSPNGEWVASGS-WDKTVCLWEITNSWPN 290

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSN 391
             GS   RI Q          +SP   LIA    + +   I  +   G Q + L     +
Sbjct: 291 FKGSKPTRILQGHLEDIEGVAFSPDNQLIASCS-NDKTIKIWEV-ASGQQVQQLEGHKYS 348

Query: 392 LQAPTWSPSGRSLI 405
           ++   +SP G+ + 
Sbjct: 349 VEDIVFSPDGQFIA 362



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 72/207 (34%), Gaps = 17/207 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + Q +A  ++    I  V +      +  + + + ++ + +  FS + K    S  
Sbjct: 8   AFSEDNQFIATGSH----IGIVRIWGAISGQEWRCLEDHQTAVESLSFSPDSKLLA-SGG 62

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +D+ + ++  D+ S   ++ L        +  +  ++  +   S    K+ + +      
Sbjct: 63  RDKKIRLW--DVTSGKFQQILEGHQDWVTALIFDKNADHLASASAINDKD-ICIWSLAQR 119

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            + +  +    S     + P    +           I +  ++  +E   ++  +    +
Sbjct: 120 QKPQKLKGDSNSIQAIAFCPDERYLISAASDNT---IRLWDRETGEEIKQMQQHSNWVYS 176

Query: 397 W--SPSGRSLIFSRKKDGDTGSKLYSI 421
              S  GR +  +     D    L+ I
Sbjct: 177 LACSKDGRWVAIAYS---DGIIHLWDI 200


>gi|159899750|ref|YP_001545997.1| hypothetical protein Haur_3232 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159892789|gb|ABX05869.1| hypothetical protein Haur_3232 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 406

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 93/276 (33%), Gaps = 51/276 (18%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS------------RDQILFE 216
             G F+  +   +   ++ I  N L ++D  G N + L                   L  
Sbjct: 98  PNGVFDYHVS--TLGQIAYIADNDLILVDGLGQNRQILVDGPTINPQADTNIMHRDQLNT 155

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA----------P-RF 265
           PR+SP+   +A++       L++Y + T      +   +     LA          P  +
Sbjct: 156 PRWSPDGSSIAFSW----GGLQIYNLITGEQTMLQPHTSSSDSALADIYDYSVLYGPNSW 211

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI-----VF 318
           S +G   L  +    E  ++   DL ++    +T +  +    A++ PD S I      F
Sbjct: 212 SPDGTTILANAGFVPEGGNLVLFDLATSEPLTITIDGNYPCCHAAWEPDGSAINVTNEAF 271

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS----PQGDLIAFTKFSGEKFAIG 374
                G   +     +  + K +        F PV S    P G  +AF         + 
Sbjct: 272 GMFPTGWWHI---NPSTGESKALIDGDNVEPFQPVSSVFMQPDGSHLAFVGTVNSSDPMQ 328

Query: 375 V--------MKKDGSQERLLVEDSNLQAPTWSPSGR 402
           +        +  DG+   L  +   + +  WSP G 
Sbjct: 329 ISAPLTLSQVGLDGTIRALRQDSQTVGSVLWSPDGS 364



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 96/304 (31%), Gaps = 48/304 (15%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---- 233
           L+   S  +G+    +  ++ DG  +  +T   + +           ++AY   +D    
Sbjct: 69  LYAISSQPNGV---QIMRLETDGNTLTSITNEPNGVFDY--HVSTLGQIAYIADNDLILV 123

Query: 234 ---EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                  ++ +    I+         R  +  PR+S +G     S      + IY  +L 
Sbjct: 124 DGLGQNRQILVDGPTINPQADTNIMHRDQLNTPRWSPDGSSIAFSW---GGLQIY--NLI 178

Query: 291 SNATERLTNTLFINISA--------------SYSPDSSQIVFESD--REGKEQLYVMQSN 334
           +     L      + SA              S+SPD + I+  +    EG   L +    
Sbjct: 179 TGEQTMLQPHTSSSDSALADIYDYSVLYGPNSWSPDGTTILANAGFVPEGGN-LVLFDLA 237

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNL 392
            S+   I+ D         W P G  I  T  +   F      +     + + L++  N+
Sbjct: 238 TSEPLTITIDGNYPCCHAAWEPDGSAINVTNEAFGMFPTGWWHINPSTGESKALIDGDNV 297

Query: 393 Q--APTWS----PSGRSLIFSRKKDGDTGSKLYS------IDLNGRNETLINTPAYASDP 440
           +   P  S    P G  L F    +     ++ +      + L+G    L          
Sbjct: 298 EPFQPVSSVFMQPDGSHLAFVGTVNSSDPMQISAPLTLSQVGLDGTIRALRQDSQTVGSV 357

Query: 441 QWVG 444
            W  
Sbjct: 358 LWSP 361



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 61/230 (26%), Gaps = 18/230 (7%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            +++++   +Q + +   SS  S   +A      +         D  + +         G
Sbjct: 172 LQIYNLITGEQTMLQPHTSSSDS--ALADIYDYSVLYGPNSWSPDGTTILANAGFVPEGG 229

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L + D   +    +T   +       + P+   +             +       
Sbjct: 230 N----LVLFDLATSEPLTITIDGNYPCCHAAWEPDGSAINVTNEAFGMFPTGWWHINPST 285

Query: 248 RAPKRIGNFRSMI-LAPRFS----SNGKRALISVQKDEA-MDIYSVDLQ------SNATE 295
              K + +  ++    P  S     +G         + +     S  L            
Sbjct: 286 GESKALIDGDNVEPFQPVSSVFMQPDGSHLAFVGTVNSSDPMQISAPLTLSQVGLDGTIR 345

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            L        S  +SPD S  V       + QL  + SN S    ++   
Sbjct: 346 ALRQDSQTVGSVLWSPDGSGAVIVPSMMAETQLQWVPSNASPVANLALSG 395


>gi|172054889|ref|YP_001806216.1| WD repeat-containing protein [Cyanothece sp. ATCC 51142]
 gi|171701170|gb|ACB54150.1| WD-repeat protein [Cyanothece sp. ATCC 51142]
          Length = 1189

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 84/226 (37%), Gaps = 14/226 (6%)

Query: 182 ESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           + + +G  +  + +    DG  I  L   R   +    FSP+ QK+  ++ D      V 
Sbjct: 581 QRLAAGDSQGKIRIFRVVDGQQILTLGTHRWWTVSV-SFSPDGQKLVSSSLD----PTVK 635

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTN 299
           L D +  +    +      + +  +S +G+    S   DE + ++  D  +    + LT 
Sbjct: 636 LWDLQTGQCLHNLQGHSKYVWSVIYSPDGRIIA-SASDDETIKLW--DSNTGQCLKTLTG 692

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                +  ++S DS  ++  S       + +         +  Q  + + +   +S  G 
Sbjct: 693 HTDWVVGVAFSRDSQHLISGSY---DNDIKLWDIATGKCLKTFQGHQDAVWIVNFSSDGQ 749

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            I F+    +   I  +      + L      ++A + SP G +++
Sbjct: 750 TI-FSSSCDKTVKIWNVSTGECLKTLRGHAKEIKAMSVSPDGNTIV 794



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 72/209 (34%), Gaps = 19/209 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q++A      +   ++ +      +    +G  R   ++  FS +G++ + S  
Sbjct: 575 AFSPDGQRLA----AGDSQGKIRIFRVVDGQQILTLGTHRWWTVSVSFSPDGQKLV-SSS 629

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + ++  DLQ+      L        S  YSPD   I   SD    E + +  SN  
Sbjct: 630 LDPTVKLW--DLQTGQCLHNLQGHSKYVWSVIYSPDGRIIASASD---DETIKLWDSNTG 684

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QA 394
              +             +S     +    +  +   I +      +     +        
Sbjct: 685 QCLKTLTGHTDWVVGVAFSRDSQHLISGSYDND---IKLWDIATGKCLKTFQGHQDAVWI 741

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +S  G+++ FS     D   K++++  
Sbjct: 742 VNFSSDGQTI-FSSSC--DKTVKIWNVST 767



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 107/339 (31%), Gaps = 50/339 (14%)

Query: 115  RVIKEGK----DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY------- 163
             V  +G            +LWD K  K +            R +A +    I        
Sbjct: 785  SVSPDGNTIVSGCFEPTVKLWDAKTGKCL--NTLLGHLTGIRTVAFSPDGQIVATGDNDQ 842

Query: 164  ----------QSITGEKGD--FNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPS 209
                      + +   +G   +   + F S   +VVSG +   L + D            
Sbjct: 843  TIKLWKIKTGECLQTWQGYTNWMWSVAFSSDGRTVVSGGVDKILRLWDIQTGRCLKSLSG 902

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRF 265
             +  ++    S + + VA       D   + L D +  +  +     + +++    A  F
Sbjct: 903  HEAWIWSVNISADGRIVA----SSGDDETIRLWDIKTGQCIRTLRHSVDHYQGGTWAVAF 958

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREG 324
            S NG+    S  +D  + ++  D+Q+     + +       S ++SPDS  +   SD   
Sbjct: 959  SLNGQYIA-SGSQDSLVKLW--DVQTGELITIFDEHKNWIWSVAFSPDSKILASGSD--- 1012

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             + + +                       +   G+   F     E   + +         
Sbjct: 1013 DQTIKLWDIKTKKCINTLTGHTNKVRSIAF---GNNSQFLVSGSEDHTVKLWDITTGDCL 1069

Query: 385  LLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               E     + +  +S +G+ +  + +   DT  KL+++
Sbjct: 1070 KTFEGHQGWIWSVDFSANGKYIASASE---DTTVKLWNV 1105



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 14/178 (7%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                    I    FS +G+R   +      + I+ V +       L    +  +S S+S
Sbjct: 562 TVFTQSFGGIHGLAFSPDGQRLA-AGDSQGKIRIFRV-VDGQQILTLGTHRWWTVSVSFS 619

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD  ++V  S       + +            Q      +  ++SP G +IA        
Sbjct: 620 PDGQKLVSSSL---DPTVKLWDLQTGQCLHNLQGHSKYVWSVIYSPDGRIIASASDDET- 675

Query: 371 FAIGVMKKDGSQ-ERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             I +   +  Q  + L   ++      +S   + LI       D   KL+ I   G+
Sbjct: 676 --IKLWDSNTGQCLKTLTGHTDWVVGVAFSRDSQHLISGSY---DNDIKLWDI-ATGK 727



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 110/366 (30%), Gaps = 53/366 (14%)

Query: 113 TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSS-------PASWRKIAHTIS 159
           T  V      +  V        +LWD++  + +   +  S            R IA    
Sbjct: 613 TVSVSFSPDGQKLVSSSLDPTVKLWDLQTGQCLHNLQGHSKYVWSVIYSPDGRIIASASD 672

Query: 160 DDIYQSITGEKG----------DFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLT 207
           D+  +      G          D+   + F  +S    SG   N + + D          
Sbjct: 673 DETIKLWDSNTGQCLKTLTGHTDWVVGVAFSRDSQHLISGSYDNDIKLWDIATGKCLKTF 732

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                 ++   FS + Q +  ++ D      V + +       K +      I A   S 
Sbjct: 733 QGHQDAVWIVNFSSDGQTIFSSSCDK----TVKIWNVSTGECLKTLRGHAKEIKAMSVSP 788

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDREGK 325
           +G   +          +   D ++       L +   I   A +SPD  QIV   D +  
Sbjct: 789 DGNTIV---SGCFEPTVKLWDAKTGKCLNTLLGHLTGIRTVA-FSPDG-QIVATGDND-- 841

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQER 384
           + + + +    +  +  Q      +   +S  G  +     SG    I  +        R
Sbjct: 842 QTIKLWKIKTGECLQTWQGYTNWMWSVAFSSDGRTVV----SGGVDKILRLWDIQTG--R 895

Query: 385 LLVEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            L   S  +A  W    S  GR +        D   +L+ I       TL ++  +    
Sbjct: 896 CLKSLSGHEAWIWSVNISADGRIVA---SSGDDETIRLWDIKTGQCIRTLRHSVDHYQGG 952

Query: 441 QW-VGF 445
            W V F
Sbjct: 953 TWAVAF 958



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 7/89 (7%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G    +V   N    K +            +SP G  +A     G+     V+      
Sbjct: 545 QGMNLAHVNFINAEFSKTVFTQSFGGIHGLAFSPDGQRLAAGDSQGKIRIFRVVD----G 600

Query: 383 ERLLVEDSNLQ---APTWSPSGRSLIFSR 408
           +++L   ++     + ++SP G+ L+ S 
Sbjct: 601 QQILTLGTHRWWTVSVSFSPDGQKLVSSS 629


>gi|21229025|ref|NP_634947.1| hypothetical protein MM_2923 [Methanosarcina mazei Go1]
 gi|20907571|gb|AAM32619.1| hypothetical protein MM_2923 [Methanosarcina mazei Go1]
          Length = 1164

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 90/267 (33%), Gaps = 54/267 (20%)

Query: 218 RFSPNQQKVAYATYDDE---------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             SP+  KV       +         DI  V ++DT  +     + +  ++      S +
Sbjct: 279 AVSPDGTKVYVTNGWYKGDDGPSYALDIGTVSVIDTATNAVTATV-DVGNLPRGVVVSPD 337

Query: 269 GKRALISVQKDEAMDIY---------SVDLQS---NATERLTNTLFINISAS-------- 308
           G +  ++      + I          SV++ S         T    IN +          
Sbjct: 338 GTKVYVTNFGSGNVSIIDTATNTVTASVNVGSMPIGVAVTPTLEPEINTTPETNTTQITT 397

Query: 309 -----YSPD--SSQIVFESDRE----------GKEQLYVMQSNGSDQKRISQDKEASYFD 351
                 +PD    +IV++ DR           G   +Y+   + S + +I+   E+   +
Sbjct: 398 DTSNQLNPDVYGDRIVWQDDRNGGNAEYWSPAGNWDIYMYDVSTSTEFQITT-GESCQIN 456

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           P     G+ I +    G K  I +      QE  +        P     G  +++   +D
Sbjct: 457 PAI--YGNKIVWQDDRGGKSDIYMYDLSTQQEIQISTSGTAFYPAI--YGDRIVWKDTRD 512

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYAS 438
               S +Y  +++   +T I+T   AS
Sbjct: 513 EK--SDIYMYNISTSQKTQISTKGIAS 537



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 73/225 (32%), Gaps = 32/225 (14%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------- 277
            AY T  D + + V    T    A   +G+    +     S +G +  ++ +        
Sbjct: 53  FAYITNQDSNNVSVIDTATNTVTATVPVGHSPEGV---AVSPDGTKVYVTSRLFSYVPGG 109

Query: 278 -KDEAMDIYSVDLQSNATERL-------TNTLFINISA---SYSPDSSQIVFESDREGKE 326
             D+ ++I ++ +++     +       T ++ + +     + SPD +++   ++     
Sbjct: 110 WGDDGIEIETL-VETGIVSVIDTATNNVTASVNVGVGPQGVAVSPDGTKVYVTNEGSDTG 168

Query: 327 QLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +  +    +    +  + +          +P G  +    +      I ++        
Sbjct: 169 AISTVSVIDTATNTVAATVNVGIRPRGIAVTPDGTKVYVMNYGSN--EISIIDTANDTVT 226

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             V   N      SP G  +  +     + G  +  ID+     T
Sbjct: 227 ATVSTENPWGIAISPDGTKVYVT-----NNGENISVIDIATNTVT 266



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 66/209 (31%), Gaps = 18/209 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +   ++V+         +++ V+D    N    T +          +P+  KV    Y  
Sbjct: 154 DGTKVYVTNEGSDTGAISTVSVID-TATNTVAATVNVGIRPRGIAVTPDGTKVYVMNYGS 212

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + ++DT  D     +       +A   S +G +  ++   +   +I  +D+ +N 
Sbjct: 213 N---EISIIDTANDTVTATVSTENPWGIA--ISPDGTKVYVT---NNGENISVIDIATNT 264

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---------SQD 344
                    +    + SPD +++   +     +       +      I         + D
Sbjct: 265 VTDTVPVGGLLDGVAVSPDGTKVYVTNGWYKGDDGPSYALDIGTVSVIDTATNAVTATVD 324

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                   V SP G  +  T F     +I
Sbjct: 325 VGNLPRGVVVSPDGTKVYVTNFGSGNVSI 353


>gi|300869509|ref|ZP_07114091.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300332482|emb|CBN59289.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 964

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/259 (19%), Positives = 95/259 (36%), Gaps = 38/259 (14%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD------------- 232
           +     ++ +   +G  I+ L+  RD++ +E  FSP+ Q +A A  D             
Sbjct: 442 TASSDKTVKLWTLEGELIQTLSGHRDRV-WEVNFSPDSQTIATAAADNNIKLWKNENPIQ 500

Query: 233 --DEDILRVYLMDTRIDRAPK-----RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
              E+I   YL+       P       +    + + +  FS +G+    S   D+ + ++
Sbjct: 501 IRQEEIKESYLIGDASSTVPHYLPYITLQAHTNWVRSVSFSPDGQTIA-SSSYDKTIKLW 559

Query: 286 SVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           ++   S    R T         S  +SPD S I         + +  ++S       + Q
Sbjct: 560 NI---SGVLIR-TFQGSNGGIKSIRFSPDGSTIA----SGSTDGIIKLRSIQGTLVEVLQ 611

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
              +      +SP G LIA          I      GS  R L   + L    +SP G++
Sbjct: 612 GHRSGIKGVRFSPNGKLIASVGVDDT---IKFWSSTGSLLRNLNYGAGLTNVNFSPDGKT 668

Query: 404 LIFSRKKDGDTGSKLYSID 422
           +        D   +L++++
Sbjct: 669 IATPSY---DNTVQLWNLN 684



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/249 (20%), Positives = 96/249 (38%), Gaps = 23/249 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ S     ++ + +  G  IR    S   I    RFSP+   +A  + D      +  
Sbjct: 545 QTIASSSYDKTIKLWNISGVLIRTFQGSNGGIKSI-RFSPDGSTIASGSTDG-----IIK 598

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           + +      + +   RS I   RFS NGK    SV  D+ +  +S    + +  R  N  
Sbjct: 599 LRSIQGTLVEVLQGHRSGIKGVRFSPNGKLIA-SVGVDDTIKFWS---STGSLLRNLNYG 654

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ----DKEASYFDPVWSPQ 357
               + ++SPD   I   S  +   QL+ +     +   +         ++  +   SP 
Sbjct: 655 AGLTNVNFSPDGKTIATPSY-DNTVQLWNLNEALKNPLAVPFMQFVGHTSTVNNISISPD 713

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTG 415
           G L+A     G    +  +K DG+  + + +D   +A   T++   + L+       D  
Sbjct: 714 GKLMASASADGTV-KLWSLK-DGTMLKSM-DDHLPEATDVTFTKDSKKLV---TVGSDGN 767

Query: 416 SKLYSIDLN 424
             L+ I+ N
Sbjct: 768 VNLWDIEGN 776



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 91/281 (32%), Gaps = 73/281 (25%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     S+ +  RDG  +  L     Q +    FS + Q +A A++D    ++++ +D  
Sbjct: 321 SASHDRSIKIWKRDGTLVATLPH--AQAVRSVNFSHDGQLIASASFD--KTVKLWKIDGT 376

Query: 246 IDRAPKRIGNFRSMILAP-------------------------------------RFSSN 268
           +    +     R +  +P                                      FS +
Sbjct: 377 LVATLQHKEPVRGVAFSPGDKIIVSGTTNGYLLMWSLKGELLKTIAAHTRDINSVTFSPD 436

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+    +   D+ + +++  L+    + L+         ++SPDS  I   +  +   +L
Sbjct: 437 GQLIA-TASSDKTVKLWT--LEGELIQTLSGHRDRVWEVNFSPDSQTIA-TAAADNNIKL 492

Query: 329 YVMQSNGSDQKR----------------------ISQDKEASY-FDPVWSPQGDLIAFTK 365
           +    N    ++                      I+     ++     +SP G  IA + 
Sbjct: 493 WK-NENPIQIRQEEIKESYLIGDASSTVPHYLPYITLQAHTNWVRSVSFSPDGQTIASSS 551

Query: 366 FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
           +      I +    G   R     +  +++  +SP G ++ 
Sbjct: 552 YDKT---IKLWNISGVLIRTFQGSNGGIKSIRFSPDGSTIA 589



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 65/180 (36%), Gaps = 21/180 (11%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G     S   D ++ I+  D        L +   +  S ++S D   I   S  +
Sbjct: 311 SFSPDGNLIA-SASHDRSIKIWKRD--GTLVATLPHAQAV-RSVNFSHDGQLIASASF-D 365

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +L+ +          +   +       +SP GD I  +  +     + +    G   
Sbjct: 366 KTVKLWKID----GTLVATLQHKEPVRGVAFSP-GDKIIVSGTTNG--YLLMWSLKGELL 418

Query: 384 RLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           + +     ++ + T+SP G+ +  +     D   KL++  L G    LI T +   D  W
Sbjct: 419 KTIAAHTRDINSVTFSPDGQLIATASS---DKTVKLWT--LEGE---LIQTLSGHRDRVW 470



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 71/203 (34%), Gaps = 21/203 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A A++D    ++++  D  +          RS+     FS +G+    S  
Sbjct: 311 SFSPDGNLIASASHD--RSIKIWKRDGTLVATLPHAQAVRSVN----FSHDGQLIA-SAS 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + ++ +D                   ++SP   +I+      G   L +    G  
Sbjct: 364 FDKTVKLWKID---GTLVATLQHKEPVRGVAFSP-GDKIIVSGTTNGY--LLMWSLKGEL 417

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPT 396
            K I+           +SP G LIA          + +   +G   + L    + +    
Sbjct: 418 LKTIAAHTR-DINSVTFSPDGQLIATASSDKT---VKLWTLEGELIQTLSGHRDRVWEVN 473

Query: 397 WSPSGRSLIFSRKKDGDTGSKLY 419
           +SP  +++        D   KL+
Sbjct: 474 FSPDSQTIA---TAAADNNIKLW 493



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 107/307 (34%), Gaps = 39/307 (12%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS-RILFVSESVVSGIIKNSL 193
           D + I    +  +   W      IS  + ++  G  G   S R      ++ SG     +
Sbjct: 543 DGQTIASSSYDKTIKLW-----NISGVLIRTFQGSNGGIKSIRFSPDGSTIASGSTDGII 597

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +    G  +  L   R  I    RFSPN + +A    DD       +       +  R 
Sbjct: 598 KLRSIQGTLVEVLQGHRSGIKGV-RFSPNGKLIASVGVDD------TIKFWSSTGSLLRN 650

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-----ERLTNTLFINISAS 308
            N+ + +    FS +GK    +   D  + +++++            +         + S
Sbjct: 651 LNYGAGLTNVNFSPDGKTIA-TPSYDNTVQLWNLNEALKNPLAVPFMQFVGHTSTVNNIS 709

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            SPD   +   S  +G  +L+ ++ +G+  K +  D      D  ++     +      G
Sbjct: 710 ISPDGKLMASAS-ADGTVKLWSLK-DGTMLKSM-DDHLPEATDVTFTKDSKKLVTVGSDG 766

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD------GDTGSKLYSID 422
               + +   +G+  +     S            +L+F+ K++      GD   KL+ ++
Sbjct: 767 ---NVNLWDIEGNLLQKFRAHSEWI--------NALMFNSKRNMLATSAGDKLVKLWQLN 815

Query: 423 LNGRNET 429
             G  ET
Sbjct: 816 AKGLFET 822



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 72/210 (34%), Gaps = 15/210 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                      +     SP+ + +A A+ D      V L   +     K + +       
Sbjct: 694 PFMQFVGHTSTVNNISISPDGKLMASASADG----TVKLWSLKDGTMLKSMDDHLPEATD 749

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             F+ + K+ +     D  ++++  D++ N  ++         +  ++   + +   S  
Sbjct: 750 VTFTKDSKKLVTVGS-DGNVNLW--DIEGNLLQKFRAHSEWINALMFNSKRNMLA-TSAG 805

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEAS---YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +   +L+ + + G  +    +  E S    FD  +     LIA     G    + +   D
Sbjct: 806 DKLVKLWQLNAKGLFETTPYKTLEGSKDWVFDVAFGDSDQLIAAGSKDGT---VRIWNLD 862

Query: 380 GSQERLLVEDSNLQ-APTWSPSGRSLIFSR 408
           G     L E  +   A  +SP G+ L  + 
Sbjct: 863 GKLVTTLDEHRDWVLAVAFSPDGQKLASAS 892



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 11/108 (10%)

Query: 306 SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S S+SPD + I   S DR     + + + +G+     +     +     +S  G LIA  
Sbjct: 309 SLSFSPDGNLIASASHDRS----IKIWKRDGTLVA--TLPHAQAVRSVNFSHDGQLIASA 362

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            F      + + K DG+    L     ++   +SP G  +I S   +G
Sbjct: 363 SFDKT---VKLWKIDGTLVATLQHKEPVRGVAFSP-GDKIIVSGTTNG 406



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 31/81 (38%), Gaps = 6/81 (7%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
              A      +SP G+LIA          I + K+DG+    L     +++  +S  G+ 
Sbjct: 302 GHTAEVNSLSFSPDGNLIASASHDRS---IKIWKRDGTLVATLPHAQAVRSVNFSHDGQL 358

Query: 404 LIFSRKKDGDTGSKLYSIDLN 424
           +        D   KL+ ID  
Sbjct: 359 IA---SASFDKTVKLWKIDGT 376


>gi|219847169|ref|YP_002461602.1| hypothetical protein Cagg_0218 [Chloroflexus aggregans DSM 9485]
 gi|219541428|gb|ACL23166.1| conserved hypothetical protein [Chloroflexus aggregans DSM 9485]
          Length = 414

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 54/338 (15%), Positives = 120/338 (35%), Gaps = 35/338 (10%)

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------HTISDDIYQSITGEKGDF 173
             L      + +   + +  K     P   R++A          +++DI   +       
Sbjct: 21  GTLSAGIITFLLFTNRPLDQKLLVVGPD--RRLALIDRQGTVQVLAEDISPELFRFPALA 78

Query: 174 --NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
              +RI ++ +   +    + L V+D    N   L  S         +SP+ + +++ + 
Sbjct: 79  PDGTRIAYIGQEGNA----SVLRVIDLTTGNRLELYRSTINPPLYIVWSPDSRSLSFLSN 134

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                L ++++     R  + + +  S +    +  +    L+ +      D   V +Q 
Sbjct: 135 RARG-LGLHIVPADGSRPAELVSSSTSSLYL-AWQPDSSSLLVHIDGSLFEDGRVVTVQP 192

Query: 292 NATERL--TNTLFINISASYSPDSSQIVFESDR--EGKEQ-------LYVMQSNGSDQKR 340
              + L   N      + ++S D     + +    EG          L  ++   +  + 
Sbjct: 193 GRQQPLYELNDPGFFQAPAWSVDGESFFYVAQPPVEGPPMVEKVESVLSRVKVGETQTQA 252

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVEDSNLQAPTWSP 399
           ++++  A+      SPQ D IA+T      F  + ++  DG  + L   + N+ A  WSP
Sbjct: 253 LAREPMAAIIFGR-SPQSDEIAYTTVGPNGFGPLKLVGLDGKVQTLSAANDNVIAFFWSP 311

Query: 400 SGRSLIFS----RKKDGDTGSKLYSIDLNGRNETLINT 433
           +G  + +     R  DG    +   ++  G     + T
Sbjct: 312 TGEQIAYLTPAGRTTDGFVQVRWQVVNRTGGTPRSLVT 349



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 51/140 (36%), Gaps = 4/140 (2%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + +PD ++I +         L V+     ++  + +         VWSP    ++F   
Sbjct: 75  PALAPDGTRIAYIGQEGNASVLRVIDLTTGNRLELYRSTINPPLYIVWSPDSRSLSFLSN 134

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                 + ++  DGS+   LV  S       W P   SL+           ++ ++   G
Sbjct: 135 RARGLGLHIVPADGSRPAELVSSSTSSLYLAWQPDSSSLLVHIDGSLFEDGRVVTV-QPG 193

Query: 426 RNETL--INTPAYASDPQWV 443
           R + L  +N P +   P W 
Sbjct: 194 RQQPLYELNDPGFFQAPAWS 213



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 51/288 (17%), Positives = 91/288 (31%), Gaps = 53/288 (18%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L ++  DG+    L  S    L+   + P+   +              +      + P  
Sbjct: 141 LHIVPADGSRPAELVSSSTSSLYL-AWQPDSSSLLVHIDGSLFEDGRVVTVQPGRQQPLY 199

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISAS 308
             N      AP +S +G+      Q           ++S    R+    T T  +     
Sbjct: 200 ELNDPGFFQAPAWSVDGESFFYVAQPPVEGPPMVEKVES-VLSRVKVGETQTQALAREPM 258

Query: 309 Y------SPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  SP S +I + +    G   L ++  +G  Q         +     WSP G+ I
Sbjct: 259 AAIIFGRSPQSDEIAYTTVGPNGFGPLKLVGLDGKVQTL--SAANDNVIAFFWSPTGEQI 316

Query: 362 AFTKFSGE------KFAIGVMKKDGSQERLLVEDSNLQAPT------------------- 396
           A+   +G       +    V+ + G   R LV      AP+                   
Sbjct: 317 AYLTPAGRTTDGFVQVRWQVVNRTGGTPRSLVT----FAPSEAFLAQINYFDAYALSFDL 372

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           WS  GR+L +S +        +Y +D+ GR     ++    +   W+ 
Sbjct: 373 WSYDGRALAYSARDG------VYVLDV-GRGIAKRHSDGTLAM--WLP 411



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 44/121 (36%), Gaps = 5/121 (4%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +L ++   G+ Q          +  P  +P G  IA+    G    + V+       RL 
Sbjct: 50  RLALIDRQGTVQVLAEDISPELFRFPALAPDGTRIAYIGQEGNASVLRVIDLTTGN-RLE 108

Query: 387 VEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           +  S +  P    WSP  RSL F   +    G  +   D + R   L+++   +    W 
Sbjct: 109 LYRSTINPPLYIVWSPDSRSLSFLSNRARGLGLHIVPADGS-RPAELVSSSTSSLYLAWQ 167

Query: 444 G 444
            
Sbjct: 168 P 168


>gi|17225202|gb|AAL37297.1|AF323581_1 beta transducin-like protein HET-E4s [Podospora anserina]
          Length = 1065

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 68/212 (32%), Gaps = 22/212 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQQKV--AYATYDDED 235
              I+  L  + RDG   R+    R  I   P         F+P    +   +   +   
Sbjct: 762 GHTIRGRLIAIVRDGY--RFALSYRMIIEKAPLQAYTSALVFAPTDSMIKKIFKKEEPGW 819

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           I  + +++   +   + +    S +L+  FS +G+R   S   D+ + I+  D  S    
Sbjct: 820 ISTISVVEAEWNACTQTLEGHGSSVLSVAFSPDGQRVA-SGSGDKTIKIW--DTASGTGT 876

Query: 296 R-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           + L        S ++SPD  ++   S       + +  +      +  +          +
Sbjct: 877 QTLEGHGGSVWSVAFSPDGQRVASGSI---DGTIKIWDAASGTCTQTLEGHGGWVHSVAF 933

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           SP G  +A          I +           
Sbjct: 934 SPDGQRVASGSSDNT---IKIWDTASGTCTQT 962



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD  ++   S   G + + +  +      +  +    S +   +SP G  +A     
Sbjct: 848 AFSPDGQRVASGS---GDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVASGSID 904

Query: 368 GEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G    I +           +E     + +  +SP G+ +        D   K++      
Sbjct: 905 GT---IKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA---SGSSDNTIKIWDTASGT 958

Query: 426 RNETL 430
             +TL
Sbjct: 959 CTQTL 963



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 7/115 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V SG    ++ + D                ++   FSP+ Q+VA  + D      + +
Sbjct: 854 QRVASGSGDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDGQRVASGSIDG----TIKI 909

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            D       + +      + +  FS +G+R   S   D  + I+  D  S    +
Sbjct: 910 WDAASGTCTQTLEGHGGWVHSVAFSPDGQRVA-SGSSDNTIKIW--DTASGTCTQ 961


>gi|253998953|ref|YP_003051016.1| Hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
 gi|253985632|gb|ACT50489.1| Hemolysin-type calcium-binding region [Methylovorus sp. SIP3-4]
          Length = 1800

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 82/261 (31%), Gaps = 58/261 (22%)

Query: 219  FSPNQQKVAYATY-----DDEDILRVYLMDTRID------RAPKRIGNFRSMILAPRFSS 267
             S + +   Y +      D    L VY+ D             + +    S++   +FSS
Sbjct: 1214 ISSDGRYAMYISQGSMDGDTNYELDVYIKDLLTGETIIASSNEQNVLGDESVVGDAKFSS 1273

Query: 268  NGKRALISVQKDE--------AMDIYSVDLQSNATERLTNT----LFINIS--ASYSPDS 313
            +    + S   D           D+Y  +L +    R++         N S  +S S D 
Sbjct: 1274 DNTYVVFSSYSDGLVAGNSYPGSDVYVKNLSTGELTRVSTDSSGNPGNNTSIWSSISSDG 1333

Query: 314  SQIVF--------ESDREGKEQLYVMQSNGSDQKRISQD-----KEASYFDPVWSPQGDL 360
              +VF         SD   +  +Y   +  +    +S         A  +    SP G  
Sbjct: 1334 RYVVFHSLASNLSSSDTNNELDVYWKDTQTNQTYLVSSSASGVVGNAKSWYGSISPDGKW 1393

Query: 361  IAFTKF--------SGEKFAIGVMKKDGSQERLLVEDSNLQ-------APTWSPSGRSLI 405
            + F           +     I +      + + +  + + +         ++S  GR +I
Sbjct: 1394 VVFESQASNLVENDTNNSTDIFLKNIQTGEIQRISTNGSSEQANFHSGDASFSADGRYVI 1453

Query: 406  FSRKKDGDTGSKLYSIDLNGR 426
            F+        S L   D NGR
Sbjct: 1454 FTS-----GASNLVEGDTNGR 1469



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 51/326 (15%), Positives = 112/326 (34%), Gaps = 67/326 (20%)

Query: 157  TISDDIYQSITGEKGDFNSRI-LFVSESVVSGIIKNSLCVMDRD---------GANIRYL 206
             +SD  Y      +   + R  +++S+  + G     L V  +D          +N + +
Sbjct: 1202 KVSD--YSQAFAGEISSDGRYAMYISQGSMDGDTNYELDVYIKDLLTGETIIASSNEQNV 1259

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDE-------DILRVYLMDTRIDRAPKRIGNFRSM 259
                + ++ + +FS +   V +++Y D            VY+ +       +   +    
Sbjct: 1260 L-GDESVVGDAKFSSDNTYVVFSSYSDGLVAGNSYPGSDVYVKNLSTGELTRVSTDSSGN 1318

Query: 260  -----ILAPRFSSNGKRALI--------SVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                  +    SS+G+  +         S   +  +D+Y  D Q+N T  ++++    + 
Sbjct: 1319 PGNNTSIWSSISSDGRYVVFHSLASNLSSSDTNNELDVYWKDTQTNQTYLVSSSASGVVG 1378

Query: 307  ------ASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQDKEASY--- 349
                   S SPD   +VFES        D      +++      + +RIS +  +     
Sbjct: 1379 NAKSWYGSISPDGKWVVFESQASNLVENDTNNSTDIFLKNIQTGEIQRISTNGSSEQANF 1438

Query: 350  --FDPVWSPQGDLIAFTK--------FSGEKFAIGVMKKDGSQERLLVED-------SNL 392
               D  +S  G  + FT          +  +  I +        +L+  +        + 
Sbjct: 1439 HSGDASFSADGRYVIFTSGASNLVEGDTNGRADIFIKDLLTGGIQLVSTNSLGQLANGSS 1498

Query: 393  QAPTWSPSGRSLIFSRKKDGDTGSKL 418
               + S +GR ++F  + +      L
Sbjct: 1499 SIASISDNGRYVVFISEANNLVDGDL 1524



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 69/185 (37%), Gaps = 29/185 (15%)

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-------DREGKEQLYVMQ 332
            + +D   ++  ++ + + T   + N + S S D   ++F+S        R     +++  
Sbjct: 1135 DNIDDVIIEESTSYSSQFTQGHYSNDTPSISADGRYVMFDSYNEFSFGSRTLAVDVFLKD 1194

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKKD--------- 379
                +  ++S   +A  F    S  G    +           + + V  KD         
Sbjct: 1195 MQTGELSKVSDYSQA--FAGEISSDGRYAMYISQGSMDGDTNYELDVYIKDLLTGETIIA 1252

Query: 380  -GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG------DTGSKLYSIDLNGRNETLIN 432
              +++ +L ++S +    +S     ++FS   DG        GS +Y  +L+    T ++
Sbjct: 1253 SSNEQNVLGDESVVGDAKFSSDNTYVVFSSYSDGLVAGNSYPGSDVYVKNLSTGELTRVS 1312

Query: 433  TPAYA 437
            T +  
Sbjct: 1313 TDSSG 1317



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/254 (12%), Positives = 76/254 (29%), Gaps = 54/254 (21%)

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISV-------QKDEAMDIYSVDLQSNATERL 297
                   +          P  S++G+  +           +  A+D++  D+Q+    ++
Sbjct: 1144 ESTSYSSQFTQGHYSNDTPSISADGRYVMFDSYNEFSFGSRTLAVDVFLKDMQTGELSKV 1203

Query: 298  TNTLFINISASYSPDSSQIVFES--DREGKEQ----LYVMQSNGSDQ------KRISQDK 345
            ++      +   S D    ++ S    +G       +Y+      +       ++     
Sbjct: 1204 SDY-SQAFAGEISSDGRYAMYISQGSMDGDTNYELDVYIKDLLTGETIIASSNEQNVLGD 1262

Query: 346  EASYFDPVWSPQGDLIAFTKFSGE--------KFAIGVMKKDGSQERLLVEDSNLQ---- 393
            E+   D  +S     + F+ +S             + V      +   +  DS+      
Sbjct: 1263 ESVVGDAKFSSDNTYVVFSSYSDGLVAGNSYPGSDVYVKNLSTGELTRVSTDSSGNPGNN 1322

Query: 394  ---APTWSPSGRSLIF------SRKKDGDTGSKLYSIDLNGRNETLINTPAY-------- 436
                 + S  GR ++F          D +    +Y  D       L+++ A         
Sbjct: 1323 TSIWSSISSDGRYVVFHSLASNLSSSDTNNELDVYWKDTQTNQTYLVSSSASGVVGNAKS 1382

Query: 437  -----ASDPQWVGF 445
                 + D +WV F
Sbjct: 1383 WYGSISPDGKWVVF 1396


>gi|21222277|ref|NP_628056.1| WD-40 repeat-containing protein [Streptomyces coelicolor A3(2)]
 gi|8247651|emb|CAB92989.1| putative WD-40 repeat protein [Streptomyces coelicolor A3(2)]
          Length = 1676

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 95/306 (31%), Gaps = 42/306 (13%)

Query: 149  ASWRKIAHTISDD----------IYQSITGEKGDFNSRILFVSESVVSGI------IKNS 192
            A     AH +  D          I  +        ++  ++++     G          +
Sbjct: 988  AQLDLAAHRLRPDDEDVRNRLISIVNAPLATPLLGHTGAVYLTSFSPDGRILATASYDRT 1047

Query: 193  LCVMD-RDGANIRYL---TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            + + D  D    + L          +    FSP+ + +A A+ D    L       R   
Sbjct: 1048 VRLWDVSDPGRPQQLGKPLTGHTSWVSTAVFSPDGRTLASASDDGTIRLWDVTDPGRPRP 1107

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINI 305
                +      +    FS +G+    S   D A+ +++V     A E    LT +     
Sbjct: 1108 LGAPLDGHGGTVYLLAFSPDGRTLA-SAHDDHAVRLWNV-ADRRAPEALDTLTGSTGAVR 1165

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK------EASYFDPVWSPQGD 359
            S ++SPD   +       G +   V   + SD +R                   +SP G 
Sbjct: 1166 SVAFSPDGDTLA-----SGGDDDKVRLWDVSDPRRPEPAGAPLAGHSGLVHSVAFSPDGH 1220

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             +A            V    G++     L      + A  +SP G  L  S     D+ +
Sbjct: 1221 TLASGSADDTVQLWDVTDPAGAKPVGAPLTGHSGPVWAVAFSPDGAMLAVSS---ADSTA 1277

Query: 417  KLYSID 422
             L+++ 
Sbjct: 1278 SLWNVS 1283



 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 77/242 (31%), Gaps = 14/242 (5%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                 ++   FSP+ + +A A+YD    L       R  +  K +    S +    FS +
Sbjct: 1022 GHTGAVYLTSFSPDGRILATASYDRTVRLWDVSDPGRPQQLGKPLTGHTSWVSTAVFSPD 1081

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGK 325
            G+    S   D  + ++ V            L          ++SPD   +    D    
Sbjct: 1082 GRTLA-SASDDGTIRLWDVTDPGRPRPLGAPLDGHGGTVYLLAFSPDGRTLASAHDDHAV 1140

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM----KKDGS 381
                V      +          +     +SP GD +A +    +K  +  +    + + +
Sbjct: 1141 RLWNVADRRAPEALDTLTGSTGAVRSVAFSPDGDTLA-SGGDDDKVRLWDVSDPRRPEPA 1199

Query: 382  QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASDP 440
               L      + +  +SP G +L        D   +L+ + D  G          ++  P
Sbjct: 1200 GAPLAGHSGLVHSVAFSPDGHTLA---SGSADDTVQLWDVTDPAGAKPVGAPLTGHSG-P 1255

Query: 441  QW 442
             W
Sbjct: 1256 VW 1257



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 12/214 (5%)

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            +P  S      A+    D++ +R  L+          +      +    FS +G R L +
Sbjct: 983  DPSLSAQLDLAAHRLRPDDEDVRNRLISIVNAPLATPLLGHTGAVYLTSFSPDG-RILAT 1041

Query: 276  VQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               D  + ++ V          + LT       +A +SPD   +   SD +G  +L+ + 
Sbjct: 1042 ASYDRTVRLWDVSDPGRPQQLGKPLTGHTSWVSTAVFSPDGRTLASASD-DGTIRLWDVT 1100

Query: 333  SNGSDQKR--ISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVE 388
              G  +           + +   +SP G  +A          + +   +   + + L   
Sbjct: 1101 DPGRPRPLGAPLDGHGGTVYLLAFSPDGRTLASAHDDHAVRLWNVADRRAPEALDTLTGS 1160

Query: 389  DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +++  +SP G +L        D   +L+ + 
Sbjct: 1161 TGAVRSVAFSPDGDTLA---SGGDDDKVRLWDVS 1191



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 61/319 (19%), Positives = 100/319 (31%), Gaps = 40/319 (12%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              RLWDV D  + +       P            DI   +    G         + +V+ 
Sbjct: 1355 RVRLWDVTDPGRPVSLSAPFEPGDG---------DIRSLVFSPDGG--------TLAVLV 1397

Query: 187  GIIKNSLC-VMDRDGANIRYLTPSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYLM 242
            G     L  V D  G        +       P    FSP+ + +A A  D    L     
Sbjct: 1398 GGRALQLWDVTDPAGPTAHGPPVALSTRYAGPDTLAFSPDGRTLATAHDDRTIQLWNADD 1457

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----T 298
             +R  R  K +      +    FS +G+    S   D+A+ ++ V        RL    T
Sbjct: 1458 PSRPRRLGKPLAGHSGYVNTLAFSPDGRTLA-SGGADDAVRLWDV-TDPAHATRLGAART 1515

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSP 356
              L      +YSPD   +   SD +G  +L+ +   G      +     +       +S 
Sbjct: 1516 GHLGPVNVLAYSPDGHTLASGSD-DGTVRLWDVTEPGEGSGGGTTLAGHTDSVVSLTFSQ 1574

Query: 357  QGDLIAFTKFSGEKFAIGVMKKD-----GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             GD +A            V         G       +  N    ++SP    L  S    
Sbjct: 1575 DGDTLASGANDNTVRLWSVTDPAEAAPIGRAMSPNAKTGNFL--SFSPVSHMLGVSS--- 1629

Query: 412  GDTGSKLYSIDLNGRNETL 430
            G    +L+S+ ++   + +
Sbjct: 1630 GTDTVRLWSLGVDDAIDRI 1648



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/281 (16%), Positives = 86/281 (30%), Gaps = 31/281 (11%)

Query: 154  IAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMD-RDGANIRY---LTP 208
            +A   + +   ++TG  G   S       +++ SG   + + + D  D            
Sbjct: 1145 VADRRAPEALDTLTGSTGAVRSVAFSPDGDTLASGGDDDKVRLWDVSDPRRPEPAGAPLA 1204

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                ++    FSP+   +A  + DD   L               +      + A  FS +
Sbjct: 1205 GHSGLVHSVAFSPDGHTLASGSADDTVQLWDVTDPAGAKPVGAPLTGHSGPVWAVAFSPD 1264

Query: 269  GKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            G    +S     A      D    S     L        +  +SPD   +   S   G  
Sbjct: 1265 GAMLAVSSADSTASLWNVSDPAYPSQVGVPLAGGSGEMYALGFSPDGHTLATGS---GDS 1321

Query: 327  QLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            ++ +     S+   RI            + P G ++A     G      V      +   
Sbjct: 1322 KVRLWSLPTSEMIGRI----------GAFRPDGHVLATAARDGRVRLWDVTDP--GRPVS 1369

Query: 386  LVE-----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            L       D ++++  +SP G +L       G    +L+ +
Sbjct: 1370 LSAPFEPGDGDIRSLVFSPDGGTLAVLV---GGRALQLWDV 1407


>gi|119773745|ref|YP_926485.1| putative transcriptional regulator, CadC [Shewanella amazonensis
           SB2B]
 gi|119766245|gb|ABL98815.1| putative transcriptional regulator, CadC [Shewanella amazonensis
           SB2B]
          Length = 729

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 86/306 (28%), Gaps = 61/306 (19%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILF---EPRFSPNQQKVAYATYDDEDILRVYLM 242
             +      V+ +D    +          +    P +S +   +AY  +D +    + L+
Sbjct: 235 RDLKAKEWRVLLQDLTTGQVSLADNSPTAYNQRYPAWSDDGGHLAYLNFDGKGRCELILL 294

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNT 300
           D    R  K +        +   +  G+           +   IY V+L +   E+L+  
Sbjct: 295 DLLT-RNAKVVSQCDKATQSSALAIRGQELYFVDSDGVEDFKKIYQVNLNTLKKEQLSRP 353

Query: 301 LFI---NISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             I   +   S SPD SQ+    +      QL V   +  + +++ +          WS 
Sbjct: 354 HSIGRGDYGLSLSPDKSQMAVLRNLSWFDTQLMVFNFSTGEWRQVLKVG-YPLKSIAWSA 412

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---------------------------ED 389
            G  + +    G    +     D      L                            E 
Sbjct: 413 DGKGLIYRAEEG---QLHRFDLDTKDRVRLTKILQEINSPRSNSKGQTVAVVGELMEEEL 469

Query: 390 SNLQAP------------------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +  AP                    SP G    F   + G    +++   L G    L 
Sbjct: 470 WHWSAPGNTKPEPWVSSSRRDYRGAISPDGTLTAFVSNRTG--LPQIWLRQLKGEEIKLT 527

Query: 432 NTPAYA 437
           +   ++
Sbjct: 528 HFDRFS 533



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 95/222 (42%), Gaps = 12/222 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S + + + Y    +E  L  + +DT   +   R+      I +PR +S G+   +  +
Sbjct: 409 AWSADGKGLIY--RAEEGQLHRFDLDT---KDRVRLTKILQEINSPRSNSKGQTVAVVGE 463

Query: 278 -KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +E +  +S    +     ++++   +   + SPD +   F S+R G  Q+++ Q  G 
Sbjct: 464 LMEEELWHWSAPGNTKPEPWVSSSR-RDYRGAISPDGTLTAFVSNRTGLPQIWLRQLKGE 522

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           + K    D+ +   + ++SP G L+A    +G  F + + K   S    +   ++++  +
Sbjct: 523 EIKLTHFDRFSFIDELIFSPNGKLLA-GTINGAAFTLDIAK---SAIHFIPGRTSVRNIS 578

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +  +   L+    + G    +L  +   G+   L+    ++ 
Sbjct: 579 FGMNDDELVLFSSEAGKRQLQLVDMR-TGKTLNLLAENGFSG 619



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 90/236 (38%), Gaps = 16/236 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPR 264
             S +    +P  SP+ +K+A+A  D +      L+            N  +      P 
Sbjct: 211 LTSLEGQEVDPVLSPDGKKLAFAFRDLKAKEWRVLLQDLTTGQVSLADNSPTAYNQRYPA 270

Query: 265 FSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           +S +G      +       ++  +DL +   + ++       S++ +    ++ F  D +
Sbjct: 271 WSDDGGHLAYLNFDGKGRCELILLDLLTRNAKVVSQCDKATQSSALAIRGQELYFV-DSD 329

Query: 324 GKE---QLYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMK 377
           G E   ++Y +  N   ++++S+        +    SP    +A  +        + V  
Sbjct: 330 GVEDFKKIYQVNLNTLKKEQLSRPHSIGRGDYGLSLSPDKSQMAVLRNLSWFDTQLMVFN 389

Query: 378 KDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
               + R +++    L++  WS  G+ LI+  ++      +L+  DL+ ++   + 
Sbjct: 390 FSTGEWRQVLKVGYPLKSIAWSADGKGLIYRAEEG-----QLHRFDLDTKDRVRLT 440


>gi|282879703|ref|ZP_06288433.1| dipeptidyl peptidase IV domain protein [Prevotella timonensis CRIS
           5C-B1]
 gi|281306372|gb|EFA98402.1| dipeptidyl peptidase IV domain protein [Prevotella timonensis CRIS
           5C-B1]
          Length = 719

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 105/313 (33%), Gaps = 60/313 (19%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDE 234
              + L +   DG + +  T    +I++                ++PN QK+A+   D  
Sbjct: 155 SESHQLFIRTADGNDTQLTTDGSREIVYGQSVHRDEFGIHKGMFWAPNGQKLAFYRMDQS 214

Query: 235 -----------------------------DILRVYLMDTRIDRAPKRIGNFRSMILAP-- 263
                                          + V + D    +         +       
Sbjct: 215 MVADYPQVNIFGRIAKCEPDKYPMAGETSHKVTVLVYDLTTKKTVTLQAGDPTDRYFTNI 274

Query: 264 RFSSNGKRAL-ISVQKDEAM-DIYSVDLQSNA----TERLTNTLFINISAS--YSP-DSS 314
            +S + K      + +D+    + S D Q+        R T+  ++    S  + P D++
Sbjct: 275 SWSPDSKTIYMFELNRDQNDCRLVSYDAQTGKKIAELYRETHDKYVEPQHSIAFLPWDNN 334

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFA 372
             + +S R+G   LY+ QSNG   K++++ K        ++ +   I +T       +  
Sbjct: 335 LFIMQSQRDGYNHLYLYQSNGKLVKQLTKGKWVVLDVIGFNTKDKSIVYTSTEKHALQTN 394

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              +     + RLL       +P+ SPSG  ++  +  +      +  I+      T   
Sbjct: 395 TYAVNVKTGKRRLLDNGRGYHSPSLSPSGAFIV-DKYSEPTVPRNIEIINTANGKRTQYF 453

Query: 433 TPAYASDPQWVGF 445
               A+DP W G+
Sbjct: 454 ---EAADP-WKGY 462


>gi|296123690|ref|YP_003631468.1| serine/threonine protein kinase-related protein [Planctomyces
            limnophilus DSM 3776]
 gi|296016030|gb|ADG69269.1| Serine/threonine protein kinase-related protein [Planctomyces
            limnophilus DSM 3776]
          Length = 1262

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 101/311 (32%), Gaps = 46/311 (14%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            R++  G+D L    ++WD     ++        P S R +A   S D             
Sbjct: 912  RIVTGGQDELV---KIWDASTGIELA--TLKGYPGSVRAVA--FSPD----------GSM 954

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                 +          +S+ + +             ++ + +  FSP+ Q++A A+ D  
Sbjct: 955  IAAAGMDTRRNPVRRDHSIKIWNSTTYQEIATLSGHERFIDDISFSPDSQRIASASNDM- 1013

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMI---LAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
               RV+ +        K+I  F+      ++  FS +G R   S   D+   ++  D ++
Sbjct: 1014 -TARVWDV-----AKAKQICLFKGHNKLVMSVAFSPDGNRVA-SGGDDKTARLW--DART 1064

Query: 292  NATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                   N     +SA  +S D + +   S       + +       + +          
Sbjct: 1065 GQELMTFNGHEAVVSALQFSKDGTLLATGS---WDSTIKLWDPISGQELKTLTGHAGFIN 1121

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--------VEDSNLQAPTWSPSGR 402
               ++P G  +A     G    I +      +E LL             +    +SP G 
Sbjct: 1122 SLEFNPVGTRLAAASTDGT---IKLWDISTGEETLLLKKFHQKATSPKFVNEVAFSPDGT 1178

Query: 403  SLIFSRKKDGD 413
             L FS   D  
Sbjct: 1179 RL-FSAHMDNS 1188



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 78/224 (34%), Gaps = 25/224 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + + +                +F+  FSP+  ++A A+ D      + + +T+     K
Sbjct: 748 QITLWNATTYEKITSFKCHPYAIFDIAFSPDGAQIASASADR----TIKIWNTKTYEEVK 803

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---- 307
                   +    F+ NG + + S   D  + ++  D+ + +   L +    + +     
Sbjct: 804 TFQGHLGAVSDVVFTPNGHQIV-SGSVDRTIKVW--DVVTGSE--LVSFASASNAPMGGA 858

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               + SPD S+I    D +G  +L+      +    + +    S      SP    I  
Sbjct: 859 TLGVAVSPDGSRIASAGD-DGTVKLWDASLTFNSI--VGKGHTQSVNCVACSPDNSRIV- 914

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
               G+   + +       E   ++    +++A  +SP G  + 
Sbjct: 915 --TGGQDELVKIWDASTGIELATLKGYPGSVRAVAFSPDGSMIA 956



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/326 (15%), Positives = 106/326 (32%), Gaps = 38/326 (11%)

Query: 125  RVEFRLWDVKDRKQIIGKKFFSS-------PASWRKIAHTISD--------DIYQSIT-- 167
             +  ++W+V    +II    ++            R IA    D          Y+ IT  
Sbjct: 704  DITVKIWNVLTGNEIITLSGYTDGVLDIEFSPDDRIIAAAGGDGQITLWNATTYEKITSF 763

Query: 168  --GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
                   F+         + S     ++ + +                + +  F+PN  +
Sbjct: 764  KCHPYAIFDIAFSPDGAQIASASADRTIKIWNTKTYEEVKTFQGHLGAVSDVVFTPNGHQ 823

Query: 226  VAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +   + D    +  V      +  A           L    S +G R   S   D  + +
Sbjct: 824  IVSGSVDRTIKVWDVVTGSELVSFASASNAPMGGATLGVAVSPDGSRIA-SAGDDGTVKL 882

Query: 285  YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQ 343
            +   L  N+     +T  +N  A  SPD+S+IV      G+++L  +  ++   +    +
Sbjct: 883  WDASLTFNSIVGKGHTQSVNCVAC-SPDNSRIV----TGGQDELVKIWDASTGIELATLK 937

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVED--SNLQAP 395
                S     +SP G +IA       +       +I +      QE   +      +   
Sbjct: 938  GYPGSVRAVAFSPDGSMIAAAGMDTRRNPVRRDHSIKIWNSTTYQEIATLSGHERFIDDI 997

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            ++SP  + +  +     D  ++++ +
Sbjct: 998  SFSPDSQRIASASN---DMTARVWDV 1020



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/340 (14%), Positives = 102/340 (30%), Gaps = 52/340 (15%)

Query: 111  LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
            +V+G V +          ++WDV    +++     S+                  I    
Sbjct: 824  IVSGSVDRT--------IKVWDVVTGSELVSFASASNAPMGGATLGVAVSPDGSRIASAG 875

Query: 171  GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             D   ++   S +  S                   +     Q +     SP+  ++    
Sbjct: 876  DDGTVKLWDASLTFNS------------------IVGKGHTQSVNCVACSPDNSRIV--- 914

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--------VQKDEAM 282
                    V + D         +  +   + A  FS +G     +        V++D ++
Sbjct: 915  -TGGQDELVKIWDASTGIELATLKGYPGSVRAVAFSPDGSMIAAAGMDTRRNPVRRDHSI 973

Query: 283  DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
             I++            +  FI+   S+SPDS +I   S+        V     + Q  + 
Sbjct: 974  KIWNSTTYQEIATLSGHERFIDD-ISFSPDSQRIASASN---DMTARVWDVAKAKQICLF 1029

Query: 343  QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSP 399
            +          +SP G+ +A     G+     +      QE L+  + +    +   +S 
Sbjct: 1030 KGHNKLVMSVAFSPDGNRVA---SGGDDKTARLWDARTGQE-LMTFNGHEAVVSALQFSK 1085

Query: 400  SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
             G  L        D+  KL+        +TL     + + 
Sbjct: 1086 DGTLLATGSW---DSTIKLWDPISGQELKTLTGHAGFINS 1122



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 83/264 (31%), Gaps = 24/264 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +    ++  V +                L    +S +   +A           + L +  
Sbjct: 608 TAGGDSTARVWNVSTGQEIVTLQGHTSYLQTVAYSQDGSLLA----TAGGDKTIKLWNPS 663

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------KDEAMDIYSVDLQSNATERLT 298
             +  + +    + +    FS +G R   S +       KD  + I++V L  N    L+
Sbjct: 664 TGQLIRTLIGHSNEVSQVAFSQDGMRLASSSRDILSFPNKDITVKIWNV-LTGNEIITLS 722

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                 +   +SPD   I       G  Q+ +  +   ++    +    + FD  +SP G
Sbjct: 723 GYTDGVLDIEFSPDDRIIAAA---GGDGQITLWNATTYEKITSFKCHPYAIFDIAFSPDG 779

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             IA          I +      +E    +     +    ++P+G  ++       D   
Sbjct: 780 AQIASASADRT---IKIWNTKTYEEVKTFQGHLGAVSDVVFTPNGHQIV---SGSVDRTI 833

Query: 417 KLYSIDLNGRNETLINTPAYASDP 440
           K++ + + G       + + A   
Sbjct: 834 KVWDV-VTGSELVSFASASNAPMG 856



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 52/188 (27%), Gaps = 17/188 (9%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
           Y  D +     K +    S + +  FS +GK+                ++ +      L 
Sbjct: 574 YYWDRKAKEELKTLQGHASGVHSVTFSPDGKQLA---TAGGDSTARVWNVSTGQEIVTLQ 630

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  + +YS D S +       G + + +   +     R             +S  G
Sbjct: 631 GHTSYLQTVAYSQDGSLLA---TAGGDKTIKLWNPSTGQLIRTLIGHSNEVSQVAFSQDG 687

Query: 359 DLIAFTKFS-----GEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKD 411
             +A +         +   + +       E + +           +SP  R +       
Sbjct: 688 MRLASSSRDILSFPNKDITVKIWNVLTGNEIITLSGYTDGVLDIEFSPDDRIIA---AAG 744

Query: 412 GDTGSKLY 419
           GD    L+
Sbjct: 745 GDGQITLW 752



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/224 (12%), Positives = 63/224 (28%), Gaps = 25/224 (11%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    FSP+ +++A             + +    +    +    S +    +
Sbjct: 586 TLQGHASGVHSVTFSPDGKQLA----TAGGDSTARVWNVSTGQEIVTLQGHTSYLQTVAY 641

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREG 324
           S +G              I   +  +    R        +S  ++S D  ++   S R+ 
Sbjct: 642 SQDGSLLA---TAGGDKTIKLWNPSTGQLIRTLIGHSNEVSQVAFSQDGMRLA-SSSRDI 697

Query: 325 KE------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                    + +      ++            D  +SP   +IA    +G    I +   
Sbjct: 698 LSFPNKDITVKIWNVLTGNEIITLSGYTDGVLDIEFSPDDRIIA---AAGGDGQITLWNA 754

Query: 379 DGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             + E++         +    +SP G  +        D   K++
Sbjct: 755 -TTYEKITSFKCHPYAIFDIAFSPDGAQIA---SASADRTIKIW 794



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 57/156 (36%), Gaps = 17/156 (10%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              V SG    +  + D             + ++   +FS +   +A  ++D      + L
Sbjct: 1046 NRVASGGDDKTARLWDARTGQELMTFNGHEAVVSALQFSKDGTLLATGSWDS----TIKL 1101

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---- 297
             D    +  K +      I +  F+  G R   +   D  + ++  D+ +     L    
Sbjct: 1102 WDPISGQELKTLTGHAGFINSLEFNPVGTRLA-AASTDGTIKLW--DISTGEETLLLKKF 1158

Query: 298  ----TNTLFINISASYSPDSSQIVFESDREGKEQLY 329
                T+  F+N   ++SPD +++ F +  +    ++
Sbjct: 1159 HQKATSPKFVN-EVAFSPDGTRL-FSAHMDNSLVIW 1192


>gi|315607398|ref|ZP_07882397.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
 gi|315250955|gb|EFU30945.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
          Length = 492

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 72/231 (31%), Gaps = 48/231 (20%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQK----------------DEAMDIYSVDLQSNAT- 294
           R  +    ++ P +  +G+    S                   D++ D++     ++   
Sbjct: 215 RNDSLHGSMVYPYWHPSGRYCAYSTNATHQSFHAVRSKRIEVFDQSSDVFVYRPDTHELL 274

Query: 295 --ERLTNTLFINISASYSPDSSQIVFESDREG---------KEQLYVMQSN---GSDQKR 340
              +L           +SPD   + F S R           +  +  +  +   G    R
Sbjct: 275 LAPQLMTADHYETYPVFSPDGRTLYFCSSRAEPIPARYREVRYNICRVSFDPATGRFGSR 334

Query: 341 ISQDKEA-----SYFDPVWSPQGDLIAFTKFSGEKFAI-------GVMKKDGSQERLLVE 388
           +     A     S   P  S  G  + FT      F I        ++     + R +  
Sbjct: 335 VDTLFNARVLGKSATHPRPSYDGRFLMFTMSDYGCFPIWHREADNWLLDLSTGRARPMTA 394

Query: 389 DSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYS--IDLNGRNETLINTP 434
            ++    +   WS + R ++F+ ++     ++LY   ID  GR       P
Sbjct: 395 ANSPDTDSWHNWSANSRWVVFTSRRGDGLYTRLYIAHIDRRGRVSKPFLLP 445


>gi|223936968|ref|ZP_03628876.1| WD-40 repeat protein [bacterium Ellin514]
 gi|223894249|gb|EEF60702.1| WD-40 repeat protein [bacterium Ellin514]
          Length = 473

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 82/247 (33%), Gaps = 17/247 (6%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D A  ++        +    FSP+   V  A+ +      V+           R    + 
Sbjct: 184 DSAPRKWTGTGPRGNINGVTFSPDGNFVFTASGEPGIYGEVHQWKVADGSVVHRCTGHKD 243

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            I A   S +GK  L +   D+ + +++V+      + L+         ++ PD   +  
Sbjct: 244 AIYALALSPDGK-ILATGSYDQKIILWNVE-TGKEIKTLSGHNGAIFGLAFRPDGKILAS 301

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +++          +   +SP G  +        +  I  + 
Sbjct: 302 ASADRT----VKLWDVATGERRDTLSQPTKEVYAVAFSPDGKRL-MAGGVDNRIRIWQIS 356

Query: 378 KDGSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +  ++    + DS            +S  G++L+ S +   D   KL++ D       + 
Sbjct: 357 ETAAETTNELLDSKFAHEGSILNLAFSSDGKTLVSSAE---DRTVKLWNADKLTERALIE 413

Query: 432 NTPAYAS 438
             P +  
Sbjct: 414 VQPDWVR 420



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/375 (13%), Positives = 118/375 (31%), Gaps = 55/375 (14%)

Query: 48  VSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLG 107
           +  A     S D L   + +++    ++     ++      +   +   I   + W   G
Sbjct: 74  IGAALVPSKSADSL---LVQMIEGRFEKEGKKKIMPPGKRPK--LDATEIAAIKAWIDAG 128

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS----------SPASWRKIAHT 157
           A     G +        ++  +   V  RK I+   +                 R +  +
Sbjct: 129 AHGPPLGTIATRELSVPKIALK---VAPRKPIMSLAYAPNLELLAVGRYGEVELRSLKDS 185

Query: 158 IS---------DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
                       +I        G+F    +F +        +     +  DG+ +   T 
Sbjct: 186 APRKWTGTGPRGNINGVTFSPDGNF----VFTASGEPGIYGEVHQWKV-ADGSVVHRCTG 240

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            +D I      SP+ + +A  +YD +    + L +    +  K +      I    F  +
Sbjct: 241 HKDAIYAL-ALSPDGKILATGSYDQK----IILWNVETGKEIKTLSGHNGAIFGLAFRPD 295

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           GK  L S   D  + ++  D+ +      L+       + ++SPD  +++     + + +
Sbjct: 296 GK-ILASASADRTVKLW--DVATGERRDTLSQPTKEVYAVAFSPDGKRLM-AGGVDNRIR 351

Query: 328 LYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           ++ +    ++            E S  +  +S  G  +  +        +     D    
Sbjct: 352 IWQISETAAETTNELLDSKFAHEGSILNLAFSSDGKTLV-SSAEDRTVKLW--NAD---- 404

Query: 384 RLLVEDSNLQA-PTW 397
             L E + ++  P W
Sbjct: 405 -KLTERALIEVQPDW 418



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 79/237 (33%), Gaps = 24/237 (10%)

Query: 157 TISD-DIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            ++D  +    TG K    +  L     +  +G     + + + +           +  +
Sbjct: 228 KVADGSVVHRCTGHKDAIYALALSPDGKILATGSYDQKIILWNVETGKEIKTLSGHNGAI 287

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           F   F P+ + +A A+ D      V L D         +      + A  FS +GKR  +
Sbjct: 288 FGLAFRPDGKILASASADR----TVKLWDVATGERRDTLSQPTKEVYAVAFSPDGKRL-M 342

Query: 275 SVQKDEAMDIYSVDLQSNATERLTN--------TLFINISASYSPDSSQIVFESDREGKE 326
           +   D  + I+ +  ++ A    TN             ++ ++S D   +V  S  +   
Sbjct: 343 AGGVDNRIRIWQIS-ETAAET--TNELLDSKFAHEGSILNLAFSSDGKTLV-SSAEDRTV 398

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +L+   ++   ++ + + +        +      +   +  G    IG       + 
Sbjct: 399 KLW--NADKLTERALIEVQPDWVRAVTFVANDKTLVVGRMDGT---IGCYDTTTGKL 450


>gi|75907846|ref|YP_322142.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75701571|gb|ABA21247.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 1176

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 50/328 (15%), Positives = 103/328 (31%), Gaps = 57/328 (17%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQ---SITGEKGDFNSRILFVSESVVSGIIKN 191
            D + +       +   WR+     +D  Y+   ++    G          +++ S  +  
Sbjct: 746  DGQTLASSSEDKTVKLWRR---DPADGSYRLDKTLKQTTGIAGVAFSADGQTIASASLDK 802

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-------------------YATYD 232
            ++ + + DG  +R L       ++   FSP+   +A                     T  
Sbjct: 803  TIKLWNIDGTELRTL-RGHSASVWGVTFSPDGSFIASAGAENVIRLWQSQNPMQKSVTAH 861

Query: 233  DEDILRVYLMD-----------------TRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               I  + +                   +R     K     +  I+A  FS++GK   + 
Sbjct: 862  YGGIWSIAITSDSSTVGTASHDNTARLWSRQGGLVKTFTQEKGGIIAISFSADGKLVAL- 920

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                    +       +      NT     +A  SPD   I   ++     Q++      
Sbjct: 921  --PTYNETVLLKKPDGSDVASYKNTQGKITAAVLSPDGQAIA-IANVHKVAQIWRRNQPT 977

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQA 394
            S   ++ +  +A  +   +SP   ++A          + +   DG     L    S + +
Sbjct: 978  S---QVLKGHQAEVWQVAFSPNSKIVASAS---GDSTVKLWTLDGKLLTTLAGHSSVVWS 1031

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              +SP  + +       GD   KL++ID
Sbjct: 1032 VAFSPDNKMVA---TGSGDNTVKLWTID 1056



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 85/241 (35%), Gaps = 25/241 (10%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           GA+           +     SP+   +A A+ D      + L      +     G  +  
Sbjct: 554 GADESNRFWGHTAAVMAVDVSPDSSLIASASIDR----TIKLWRRDGTKITTLKG-HQGA 608

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + + RFS +G+    S  +D  + ++ ++      +            ++S D     F 
Sbjct: 609 VRSVRFSPDGQMVA-SASEDGTIKLWKLN--GTLLKTFKGHTASVWGVAFSRDGQ---FL 662

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +       + + + +G+        KEA +    +SP G ++A     G    + + ++ 
Sbjct: 663 ASASWDTTVRLWKRDGTLLNTFRDSKEAFWGV-AFSPDGQIVAAANLDGT---VKLWQRQ 718

Query: 380 GSQER-------LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           GS  +       L    + +    +SP G++L  S +   D   KL+  D    +  L  
Sbjct: 719 GSGWQEAKPLQPLKSHTAWVVGVAFSPDGQTLASSSE---DKTVKLWRRDPADGSYRLDK 775

Query: 433 T 433
           T
Sbjct: 776 T 776



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 72/187 (38%), Gaps = 16/187 (8%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+ Q +A A      + +++    R     + +   ++ +    FS N  + + S   D
Sbjct: 953  SPDGQAIAIANVH--KVAQIWR---RNQPTSQVLKGHQAEVWQVAFSPN-SKIVASASGD 1006

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              + ++++D        L     +  S ++SPD+  +   S   G   + +   +G   +
Sbjct: 1007 STVKLWTLD--GKLLTTLAGHSSVVWSVAFSPDNKMVATGS---GDNTVKLWTIDGKLLR 1061

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWS 398
              +    A+ +   +SP G ++A          + + K DG++   L    + ++    S
Sbjct: 1062 TFT-GHTAAIWGVAFSPDGKILASGSVDAT---VKLWKMDGTELTTLTGHTAAIRKIAIS 1117

Query: 399  PSGRSLI 405
              G  L 
Sbjct: 1118 RDGTILA 1124



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 68/207 (32%), Gaps = 14/207 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A       S    +    FSP+ Q +A ++ D    ++++  D             ++  
Sbjct: 725 AKPLQPLKSHTAWVVGVAFSPDGQTLASSSED--KTVKLWRRDPADGSYRLDKTLKQTTG 782

Query: 261 LA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +A   FS++G+    S   D+ + ++  ++       L          ++SPD S I   
Sbjct: 783 IAGVAFSADGQTIA-SASLDKTIKLW--NIDGTELRTLRGHSASVWGVTFSPDGSFIA-- 837

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               G E +  +  + +  ++         +    +     +             +  + 
Sbjct: 838 --SAGAENVIRLWQSQNPMQKSVTAHYGGIWSIAITSDSSTVGTASHDNTA---RLWSRQ 892

Query: 380 GSQERLLV-EDSNLQAPTWSPSGRSLI 405
           G   +    E   + A ++S  G+ + 
Sbjct: 893 GGLVKTFTQEKGGIIAISFSADGKLVA 919


>gi|189460330|ref|ZP_03009115.1| hypothetical protein BACCOP_00967 [Bacteroides coprocola DSM 17136]
 gi|189433028|gb|EDV02013.1| hypothetical protein BACCOP_00967 [Bacteroides coprocola DSM 17136]
          Length = 471

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 78/249 (31%), Gaps = 58/249 (23%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV-----------------YLMDTRID 247
             T S       P + P+   +AY+  D +    V                 Y  +T   
Sbjct: 193 TKTDSTISACVYPYWHPSGDYIAYSVNDTKQAFHVVHDERIEVMDNASDIVVYHPETHRL 252

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                +    S    P FS++G++           +  ++           +   I+   
Sbjct: 253 LTSPLLSKKESFETFPVFSADGRKLYFCS-----AEAQAMPEDYKKVRY--SLCSID--- 302

Query: 308 SYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
                     F+S R   G +   ++ ++   +         S   P  S  G  I +T 
Sbjct: 303 ----------FDSSRGTFGNKIDTLVSASSLGK---------SVSFPRPSYDGKYIMYTL 343

Query: 366 FSGEKFAIG-------VMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTG 415
                F+I        ++     + R + E ++ +  +   WS +    +FS ++D    
Sbjct: 344 SDYGNFSIWHREADLWLLDLKSGESRNITEVNSPETESYHNWSSNSHWFVFSSRRDDGLY 403

Query: 416 SKLYSIDLN 424
           ++LY   ++
Sbjct: 404 TRLYLASID 412



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 81/244 (33%), Gaps = 40/244 (16%)

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           +L     + D K    I    +           H   D I  S+   K  F+   +   E
Sbjct: 183 QLEGRLEVLDTKTDSTISACVY--------PYWHPSGDYIAYSVNDTKQAFH---VVHDE 231

Query: 183 SVVSGIIKNSLCVMDRDGANIRY--LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            +      + + V   +   +    L   ++     P FS + +K+ + + + + +   Y
Sbjct: 232 RIEVMDNASDIVVYHPETHRLLTSPLLSKKESFETFPVFSADGRKLYFCSAEAQAMPEDY 291

Query: 241 ----------LMDTRIDRAPKRI------GNFRSMILAPRFSSNGKRALISVQKDEA--- 281
                       D+       +I       +    +  PR S +GK  + ++        
Sbjct: 292 KKVRYSLCSIDFDSSRGTFGNKIDTLVSASSLGKSVSFPRPSYDGKYIMYTLSDYGNFSI 351

Query: 282 ----MDIYSVDLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDREGK--EQLYVMQS 333
                D++ +DL+S  +  +T           ++S +S   VF S R+     +LY+   
Sbjct: 352 WHREADLWLLDLKSGESRNITEVNSPETESYHNWSSNSHWFVFSSRRDDGLYTRLYLASI 411

Query: 334 NGSD 337
           + + 
Sbjct: 412 DDNG 415


>gi|313204288|ref|YP_004042945.1| hypothetical protein Palpr_1821 [Paludibacter propionicigenes WB4]
 gi|312443604|gb|ADQ79960.1| hypothetical protein Palpr_1821 [Paludibacter propionicigenes WB4]
          Length = 489

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 72/214 (33%), Gaps = 45/214 (21%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAM-------DIYSVDLQSNA-----------TERLTN 299
              + P +  +GK    SV K   +        I  VDL+S+            T  L  
Sbjct: 218 GSFVYPYWHPSGKYIAYSVNKTRQVFHEAKEERIEVVDLESDVIVYQPETNQVLTTNLLK 277

Query: 300 TLFINISASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQKRISQDK-------- 345
           T       ++S D   + F S        + K+  Y + S G D K+ +           
Sbjct: 278 TPSFETFPAFSADGRTLYFCSASQKNIPKDYKDVKYSLCSIGFDPKKGTFGSHVDTLVSA 337

Query: 346 ---EASYFDPVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAP 395
                S   P  S  G  I FT      F+I        ++       R L E ++    
Sbjct: 338 KVLNKSVSFPRPSYDGKYIMFTLSDYGNFSIWHKEADLWLLNLADKSIRRLDEVNSDDTE 397

Query: 396 T---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +   WS +    +FS ++ G   ++LY   ++ +
Sbjct: 398 SYHNWSSNSHWFVFSSRRGGGLYTRLYIASIDDK 431



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 27/154 (17%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVY---LMDTRIDRAPKRIGNFRSM--------- 259
                P FS + + + + +   ++I + Y              + G F S          
Sbjct: 280 SFETFPAFSADGRTLYFCSASQKNIPKDYKDVKYSLCSIGFDPKKGTFGSHVDTLVSAKV 339

Query: 260 ----ILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLFINIS-- 306
               +  PR S +GK  + ++             D++ ++L   +  RL      +    
Sbjct: 340 LNKSVSFPRPSYDGKYIMFTLSDYGNFSIWHKEADLWLLNLADKSIRRLDEVNSDDTESY 399

Query: 307 ASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQ 338
            ++S +S   VF S R G    +LY+   +    
Sbjct: 400 HNWSSNSHWFVFSSRRGGGLYTRLYIASIDDKGV 433



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 60/216 (27%), Gaps = 44/216 (20%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDIL------RVYLMDTRIDRA----------PKRIGN 255
                P + P+ + +AY+      +       R+ ++D   D               +  
Sbjct: 218 GSFVYPYWHPSGKYIAYSVNKTRQVFHEAKEERIEVVDLESDVIVYQPETNQVLTTNLLK 277

Query: 256 FRSMILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINI---- 305
             S    P FS++G+             KD     YS+       ++ T    ++     
Sbjct: 278 TPSFETFPAFSADGRTLYFCSASQKNIPKDYKDVKYSLCSIGFDPKKGTFGSHVDTLVSA 337

Query: 306 --------SASYSPDSSQIVFESDREGKEQL-------YVMQSNGSDQKRISQ-DKEASY 349
                       S D   I+F     G   +       +++       +R+ + + + + 
Sbjct: 338 KVLNKSVSFPRPSYDGKYIMFTLSDYGNFSIWHKEADLWLLNLADKSIRRLDEVNSDDTE 397

Query: 350 FDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQE 383
               WS       F+   G      + +   D    
Sbjct: 398 SYHNWSSNSHWFVFSSRRGGGLYTRLYIASIDDKGV 433


>gi|284054405|ref|ZP_06384615.1| WD-40 repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 342

 Score = 75.8 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 99/265 (37%), Gaps = 41/265 (15%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-----------E 234
           S     ++ +    G  ++ L+   D++     FSPN + +A A+YD             
Sbjct: 8   SASQDTTVKLWSSSGKLLQTLSGHSDRVSSV-SFSPNGEWLATASYDHTVKIWKRLNSQS 66

Query: 235 DILRVYLMDTRIDRA------------PKRIGNFRSM---ILAPRFSSNGKRALISVQKD 279
           +    + M  R+ +             P  +         ++   +S +G+  L S  KD
Sbjct: 67  NWYDNWPMKLRVSKFNGIGVIPKSLFVPSPVATLVGHTDSVMTVTYSPDGQYIL-SGSKD 125

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             + I++ D        +T         S+SPDS  +V  SD +G   L+      +   
Sbjct: 126 GTIKIWTAD--GQFLRTITGHQEWVNQVSFSPDSRTVVSASD-DGTLILWKWDPANTMLS 182

Query: 340 RIS--QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--P 395
           R+   Q  E+      +SP G +IA   +      + +  +DG     L++ ++      
Sbjct: 183 RLKTIQAHESYVLGVNFSPNGKVIASAGYDNT---VKLWTQDGVLLNTLLKGTSDSVTRV 239

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYS 420
            +SP G  L  +     D+  +++S
Sbjct: 240 VFSPDGSLLASASY---DSHVRIWS 261



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 86/224 (38%), Gaps = 20/224 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    +SP+ Q +   + D    ++++  D    +  + I   +  +    F
Sbjct: 99  TLVGHTDSVMTVTYSPDGQYILSGSKD--GTIKIWTAD---GQFLRTITGHQEWVNQVSF 153

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDR 322
           S +  R ++S   D  + ++  D  +    RL          +  ++SP+   I      
Sbjct: 154 SPD-SRTVVSASDDGTLILWKWDPANTMLSRLKTIQAHESYVLGVNFSPNGKVIA---SA 209

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGS 381
                + +   +G     + +    S    V+SP G L+A   +      + +    DG+
Sbjct: 210 GYDNTVKLWTQDGVLLNTLLKGTSDSVTRVVFSPDGSLLASASYDS---HVRIWSAKDGT 266

Query: 382 QERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             + L+  S+ + +  +SP GR+L  + +   D    ++++DL+
Sbjct: 267 LLKTLMGHSDSVMSLGFSPDGRTLASASR---DHSVIMWNLDLD 307



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 64/184 (34%), Gaps = 10/184 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   DG  +R +T  ++ +     FSP+ + V  A+ D   IL  +     
Sbjct: 121 SGSKDGTIKIWTADGQFLRTITGHQEWVNQV-SFSPDSRTVVSASDDGTLILWKWDPANT 179

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFI 303
           +    K I    S +L   FS NGK    S   D  + +++ D          L  T   
Sbjct: 180 MLSRLKTIQAHESYVLGVNFSPNGKVIA-SAGYDNTVKLWTQD---GVLLNTLLKGTSDS 235

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                +SPD S +   S       + +  +      +       S     +SP G  +A 
Sbjct: 236 VTRVVFSPDGSLLASASY---DSHVRIWSAKDGTLLKTLMGHSDSVMSLGFSPDGRTLAS 292

Query: 364 TKFS 367
               
Sbjct: 293 ASRD 296


>gi|282898684|ref|ZP_06306672.1| WD40-like protein Beta Propeller protein [Cylindrospermopsis
           raciborskii CS-505]
 gi|281196552|gb|EFA71461.1| WD40-like protein Beta Propeller protein [Cylindrospermopsis
           raciborskii CS-505]
          Length = 180

 Score = 75.4 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 55/137 (40%), Gaps = 5/137 (3%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SAS 308
           R  N  +    P+ S  G+  +    +  + D+Y  D  + +   L      +      +
Sbjct: 45  RGLNSLASEFNPQIS--GRYIVFVTDRGGSQDVYLFDTITRSLVDLPGLNTFDTMADHPA 102

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S D   +VF + R+GK  +++        + ++ +  A + +P  S  G  IAF   + 
Sbjct: 103 VSQDGRYVVFAASRQGKSGIFLYDRETRQSRNLTTNLVAQFRNPTISADGTRIAFEFTND 162

Query: 369 EKFAIGVMKKDGSQERL 385
            ++ I V  + G +  +
Sbjct: 163 GQWDILVCDRFGQKLNI 179



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 50/141 (35%), Gaps = 12/141 (8%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               I S    S    R  N+L    +   S     IVF +DR G + +Y+  +      
Sbjct: 31  GYPRILSYPFDSGG--RGLNSLASEFNPQIS--GRYIVFVTDRGGSQDVYLFDTITRSLV 86

Query: 340 RI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQ 393
            +    + D  A +  P  S  G  + F      K  I +  ++  Q R L  +  +  +
Sbjct: 87  DLPGLNTFDTMADH--PAVSQDGRYVVFAASRQGKSGIFLYDRETRQSRNLTTNLVAQFR 144

Query: 394 APTWSPSGRSLIFSRKKDGDT 414
            PT S  G  + F    DG  
Sbjct: 145 NPTISADGTRIAFEFTNDGQW 165



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 6/124 (4%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRA 272
           F P+ S   + + + T D      VYL DT         G   F +M   P  S +G+  
Sbjct: 54  FNPQIS--GRYIVFVT-DRGGSQDVYLFDTITRSLVDLPGLNTFDTMADHPAVSQDGRYV 110

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVM 331
           + +  +     I+  D ++  +  LT  L     + + S D ++I FE   +G+  + V 
Sbjct: 111 VFAASRQGKSGIFLYDRETRQSRNLTTNLVAQFRNPTISADGTRIAFEFTNDGQWDILVC 170

Query: 332 QSNG 335
              G
Sbjct: 171 DRFG 174



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 13/124 (10%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  ++     +   +     +  AS F+P  S  G  I F    G    + +        
Sbjct: 31  GYPRILSYPFDSGGRGL---NSLASEFNPQIS--GRYIVFVTDRGGSQDVYLFDTITRSL 85

Query: 384 RLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYA 437
             L      D+    P  S  GR ++F+  + G +G  LY  D   R    + T   A  
Sbjct: 86  VDLPGLNTFDTMADHPAVSQDGRYVVFAASRQGKSGIFLY--DRETRQSRNLTTNLVAQF 143

Query: 438 SDPQ 441
            +P 
Sbjct: 144 RNPT 147



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 28/88 (31%), Gaps = 1/88 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             + D +   P  S + + V +A         ++L D    ++     N  +    P  S
Sbjct: 91  LNTFDTMADHPAVSQDGRYVVFAASRQGKS-GIFLYDRETRQSRNLTTNLVAQFRNPTIS 149

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT 294
           ++G R       D   DI   D      
Sbjct: 150 ADGTRIAFEFTNDGQWDILVCDRFGQKL 177


>gi|238799145|ref|ZP_04642599.1| hypothetical protein ymoll0001_1270 [Yersinia mollaretii ATCC
           43969]
 gi|238717016|gb|EEQ08878.1| hypothetical protein ymoll0001_1270 [Yersinia mollaretii ATCC
           43969]
          Length = 459

 Score = 75.4 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 65/160 (40%), Gaps = 20/160 (12%)

Query: 279 DEAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQL 328
           +           S +  R+T T       +  S   +   SPD S I     D +G  QL
Sbjct: 306 EGTPTTLPAPPASVSQRRVTFTAERRFPGLATSPRHWLRASPDGSVIACLMKDEKGVVQL 365

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++  NG + ++++  +        W PQG  +AF   +    ++     +  Q R L  
Sbjct: 366 WLVSPNGGEPRQLTSGQWGIQSAFSWHPQGHSLAFVCDN----SVMRCDSESGQLRRLTV 421

Query: 389 DS----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            S       A  +SP G  + F R+ DG   +++++++ +
Sbjct: 422 RSAIAPLADAVVFSPDGTQIAFMREIDG--LAQIFTVNAD 459



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R SP+   +A    D++ +++++L+        +       +  A  +   G        
Sbjct: 344 RASPDGSVIACLMKDEKGVVQLWLVSPNGGEPRQLTSGQWGIQSAFSWHPQGHSLAFVCD 403

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFI---NISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                 +   D +S    RLT    I     +  +SPD +QI F  + +G  Q++ + ++
Sbjct: 404 NS----VMRCDSESGQLRRLTVRSAIAPLADAVVFSPDGTQIAFMREIDGLAQIFTVNAD 459



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 15/139 (10%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASY-----FDPVW---SPQGDLIA-FTKFSGEKFAI 373
           EG             Q+R++   E  +         W   SP G +IA   K       +
Sbjct: 306 EGTPTTLPAPPASVSQRRVTFTAERRFPGLATSPRHWLRASPDGSVIACLMKDEKGVVQL 365

Query: 374 GVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIF----SRKKDGDTGSKLYSIDLNGRN 427
            ++  +G + R L         A +W P G SL F    S  +      +L  + +    
Sbjct: 366 WLVSPNGGEPRQLTSGQWGIQSAFSWHPQGHSLAFVCDNSVMRCDSESGQLRRLTVRSAI 425

Query: 428 ETLINTPAYASDPQWVGFM 446
             L +   ++ D   + FM
Sbjct: 426 APLADAVVFSPDGTQIAFM 444



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 7/101 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++  +G   R LT  +  I     + P    +A+   +      V   D+   +  +
Sbjct: 364 QLWLVSPNGGEPRQLTSGQWGIQSAFSWHPQGHSLAFVCDN-----SVMRCDSESGQLRR 418

Query: 252 RI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                    +  A  FS +G +     + D    I++V+  
Sbjct: 419 LTVRSAIAPLADAVVFSPDGTQIAFMREIDGLAQIFTVNAD 459


>gi|194335525|ref|YP_002017319.1| WD-40 repeat protein [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308002|gb|ACF42702.1| WD-40 repeat protein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 316

 Score = 75.4 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 21/240 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   +++ + D +     ++    D  +    FSP+ + VA  + D      +      
Sbjct: 93  SGSTDSTVRIWDAETGKCLHVCKGHDTAVRMVAFSPDSKVVASCSRDT----TIRRWSVE 148

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFI 303
                 R+   +S I    +S NGK         E   I   D++S        TN   +
Sbjct: 149 TGEELSRLLGHKSYIECLAYSHNGKTIA---SCGEEPVIKIWDVESGKNSANYRTNDR-L 204

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           + + ++SPD   I F         + ++ +   +  R+ +  + +     ++P G  +  
Sbjct: 205 SHALAFSPDDRFIAFC---GRDAMVKILDAASGEITRVFEGHQDAVRSVCFTPDGSRVVS 261

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
                    + +   +  ++  L     L+  +   SP G+ +        D   KL++I
Sbjct: 262 AANDET---VRLWDIESGKQLHLYRGHVLEVQSVDVSPDGKIIASGSD---DRKIKLWAI 315



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 70/208 (33%), Gaps = 16/208 (7%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N+          +   +FS + +K+   ++D+     V L D    ++   +    + + 
Sbjct: 25  NLIKTMEGHLDRVLGVKFSADGKKLVSGSFDE----TVMLWDVASGQSLFTMKGHETWVE 80

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES 320
              FS NGK    S   D  + I+  D ++     +       +   ++SPDS  +   S
Sbjct: 81  CIDFSRNGKLLA-SGSTDSTVRIW--DAETGKCLHVCKGHDTAVRMVAFSPDSKVVASCS 137

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  +        ++       ++      +S  G  IA     GE+  I +   + 
Sbjct: 138 R---DTTIRRWSVETGEELSRLLGHKSYIECLAYSHNGKTIASC---GEEPVIKIWDVES 191

Query: 381 SQ--ERLLVEDSNLQAPTWSPSGRSLIF 406
            +        D    A  +SP  R + F
Sbjct: 192 GKNSANYRTNDRLSHALAFSPDDRFIAF 219


>gi|218441311|ref|YP_002379640.1| hypothetical protein PCC7424_4408 [Cyanothece sp. PCC 7424]
 gi|218174039|gb|ACK72772.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 1177

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 76/216 (35%), Gaps = 17/216 (7%)

Query: 191  NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            N++ +   DG  +       D        SP+ Q +A       +I R   +  R    P
Sbjct: 929  NTVNLWKPDGT-LVDTYQHSDGTHLGVTLSPDGQTLA-----MGNIDRRVKLWPRHLPQP 982

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            K +   ++ +    FS +  R L S   D    ++  +L+    +  T         ++S
Sbjct: 983  KSLKGHQAEVWNVAFSPD-SRLLASASSDSTAKLW--NLEGKLLKTFTGHSSAVWKVNFS 1039

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             D   I   S   G   + +    G+   R  +   A+ +   ++P   ++A        
Sbjct: 1040 HDGKMIATGS---GDNTVKLWSLEGT-VLRTFKGHRAAVWGVAFTPDDQILASGSVDTT- 1094

Query: 371  FAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
              I + K DG++   L    + ++    SP G  L 
Sbjct: 1095 --IKLWKLDGTELMTLTGHTAAIRELAISPDGTFLA 1128



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/296 (15%), Positives = 104/296 (35%), Gaps = 32/296 (10%)

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           Q + +  + +    R   H  +     +++ +     S             +  ++ +  
Sbjct: 545 QALRQAVYGADEYNRFAGHQAAVLAV-AVSPDSSLIAS-----------ASVDKTVRLWR 592

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--KRIGN 255
            DG  +  LT     I+    FSP+ Q +   +  D  IL+ + +D +       K +  
Sbjct: 593 NDGTPVATLT-GHPGIVRAVEFSPDGQLL--VSGGDNGILKFWKLDQKKGTYQLYKNLTA 649

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +  I    FS +G+    +   D  + ++  D      +   +        ++SPD  Q
Sbjct: 650 HQGGIWGVAFSPDGQTLA-TASMDRVVKLWKRD--GTLIKTFNDNPGGFWRVAFSPDG-Q 705

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---VWSPQGDLIAFTKFSGEKFA 372
           +V  +  +   +++     G  +  + Q  E          +S  G ++A +        
Sbjct: 706 LVAGASVDKTIKIWKRDKTGWQEAELVQTLEGHTGWIAGLAFSLDGKILA-SSSEDTTVK 764

Query: 373 IGVMK-KDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +      DG+    + L   ++ +    +SP G++L  +     D   K++ ID  
Sbjct: 765 LWKQNQTDGTYTLDKTLNAHEAGVWGIAFSPDGQTLASASL---DKTIKVWRIDGT 817



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/268 (15%), Positives = 100/268 (37%), Gaps = 22/268 (8%)

Query: 161 DIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            +Y+++T  +G           +++ +  +   + +  RDG  I+          +   F
Sbjct: 642 QLYKNLTAHQGGIWGVAFSPDGQTLATASMDRVVKLWKRDGTLIKT-FNDNPGGFWRVAF 700

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSNGKRALISV 276
           SP+ Q VA A+ D    ++++  D    +  + +              FS +GK  L S 
Sbjct: 701 SPDGQLVAGASVD--KTIKIWKRDKTGWQEAELVQTLEGHTGWIAGLAFSLDGK-ILASS 757

Query: 277 QKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +D  + ++  +           L          ++SPD   +   S     + + V + 
Sbjct: 758 SEDTTVKLWKQNQTDGTYTLDKTLNAHEAGVWGIAFSPDGQTLASASL---DKTIKVWRI 814

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNL 392
           +G+  + + +    S +   +SP G  I     +G +  + + +++    + +V   S +
Sbjct: 815 DGTQLRSL-RGHLTSVWGVKFSPDGRFIV---SAGAENLVRLWQRENPFYKTVVGHQSGI 870

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +   S     +     ++    +KL+S
Sbjct: 871 WSVAISADSSMIATVSHEN---TNKLWS 895



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 105/275 (38%), Gaps = 24/275 (8%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             E G +        +++ S  +  ++ V   DG  +R L       ++  +FSP+ + + 
Sbjct: 784  HEAGVWGIAFSPDGQTLASASLDKTIKVWRIDGTQLRSL-RGHLTSVWGVKFSPDGRFI- 841

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              +   E+++R++    R +   K +   +S I +   S++      +V  +    ++S 
Sbjct: 842  -VSAGAENLVRLWQ---RENPFYKTVVGHQSGIWSVAISADSSMIA-TVSHENTNKLWS- 895

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
              +S    R      I+IS +    ++ I F    +    + + + +G+      Q  + 
Sbjct: 896  --RSGQLLRTFPNTQISISGTSFSQNNLIAFA---QQGNTVNLWKPDGT-LVDTYQHSDG 949

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            ++     SP G  +A       +  +         + L    + +    +SP  R L  +
Sbjct: 950  THLGVTLSPDGQTLAMGNID-RRVKLWPRHLP-QPKSLKGHQAEVWNVAFSPDSRLLASA 1007

Query: 408  RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                 D+ +KL+  +L G+   L+ T    S   W
Sbjct: 1008 SS---DSTAKLW--NLEGK---LLKTFTGHSSAVW 1034



 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 39/116 (33%), Gaps = 8/116 (6%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                    +++  FS + + +A  + D+     V L            G  R+ +    F
Sbjct: 1025 TFTGHSSAVWKVNFSHDGKMIATGSGDN----TVKLWSLEGTVLRTFKG-HRAAVWGVAF 1079

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            + +  + L S   D  + ++ +D        LT         + SPD + +    D
Sbjct: 1080 TPD-DQILASGSVDTTIKLWKLD--GTELMTLTGHTAAIRELAISPDGTFLASVGD 1132


>gi|238500856|ref|XP_002381662.1| vegetative incompatibility WD repeat protein, putative [Aspergillus
           flavus NRRL3357]
 gi|220691899|gb|EED48246.1| vegetative incompatibility WD repeat protein, putative [Aspergillus
           flavus NRRL3357]
          Length = 527

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 57/359 (15%), Positives = 130/359 (36%), Gaps = 50/359 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQ----------------IIGKKFFSSPASWR--KIA 155
           GR++  G + + V  RLWD                      +   +  +S +  R  ++ 
Sbjct: 113 GRLLASGSEDMTV--RLWDTATGTYQQTLNGHSDRIHSVAFLPNGRLLASGSEDRTVRLW 170

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            T++ ++ ++I G  G   S     +  + VSG    ++ + D +   ++ +       +
Sbjct: 171 DTVTGELQKTIEGHLGTVQSVAFSPNGQLLVSGSTDRTVRLWDTETGALQQILKGHSSRV 230

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               FSP+ + ++  + D+     + L +       + +      I +  FS NG+    
Sbjct: 231 LSVVFSPDGRLLSSGSEDN----IICLWEVVKGALQRTLTGHLGGIRSVVFSPNGRLLA- 285

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQ 332
           S  +D  + ++  D  +   ++ T    +N   S ++SP+ S +V     +   +L+   
Sbjct: 286 SGSEDRTVRLW--DTVTGKLQK-TFNGHLNAIQSVTFSPN-SYLVVSGSTDKTMRLW--D 339

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +     ++ +  +  +     +SP G L+A          +          +      + 
Sbjct: 340 TETGALQQ-TLVQSGAIRSVAFSPHGQLVASGSRDS---IVRFWDLAAGAPQQTFNGHSD 395

Query: 393 --QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA------YASDPQWV 443
              +  +SP GR L        D   +L++I   G     +N         +A D  ++
Sbjct: 396 RIHSVAFSPDGRLLATGSH---DQTVRLWNI-ATGALLQTLNVNGLVHYLEFAPDGSYI 450



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 86/242 (35%), Gaps = 26/242 (10%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQQKVAY 228
           IL   ++ +SG    ++     D    R+L  +R  +   P         F+P +  +  
Sbjct: 13  ILDTLQTGISGNESPAIWDFLHD--AKRFLLKNRQIVDEAPLQIYCAGLVFAP-RTAIIR 69

Query: 229 ATYDDEDILRV---YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                E    +     ++ R     + +      + +  FSS+G+    S  +D  + ++
Sbjct: 70  RQLRSEGPSWICQFPQVEERWSAELQALEGHSQPVNSVAFSSDGRLLA-SGSEDMTVRLW 128

Query: 286 SVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             D  +   ++  N     I S ++ P+   +   S+      + +  +   + ++  + 
Sbjct: 129 --DTATGTYQQTLNGHSDRIHSVAFLPNGRLLASGSE---DRTVRLWDTVTGELQKTIEG 183

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGR 402
              +     +SP G L+           + +   +    + ++    S + +  +SP GR
Sbjct: 184 HLGTVQSVAFSPNGQLLVSGSTDRT---VRLWDTETGALQQILKGHSSRVLSVVFSPDGR 240

Query: 403 SL 404
            L
Sbjct: 241 LL 242


>gi|154489899|ref|ZP_02030160.1| hypothetical protein PARMER_00128 [Parabacteroides merdae ATCC
           43184]
 gi|154089341|gb|EDN88385.1| hypothetical protein PARMER_00128 [Parabacteroides merdae ATCC
           43184]
          Length = 484

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 47/290 (16%), Positives = 96/290 (33%), Gaps = 50/290 (17%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKV 226
                   R++     + + +      +   D   I        + +        +  K+
Sbjct: 125 PIDPYIAYRLIDPGYQLWNEMGIYQRELSSFDQEPILENRLTDNNCMNCHSFCMQDPDKM 184

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------- 278
            +     +    V++   RI+    +     S ++ P +  +GK    S+          
Sbjct: 185 LF-HVRAKYGCTVFVDGDRIETLDTKTDRTISALVYPSWHPSGKFVAFSINNTTQDTHPV 243

Query: 279 ------DEAMDIYSVDLQSNA---TERLTNTLFINISASYSPDSSQIVFESD-------- 321
                 D+A D+   D++      T+ L +        ++SPD  Q+ F S         
Sbjct: 244 HRTEVYDKASDVVVYDVEKQEIVTTQALFSKKRFETFPTFSPDGKQLYFCSAPALKVPGE 303

Query: 322 -REGKEQLYVMQSN------GSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            R+ +  L  +  +      GS    I Q   +  S   P  SP G  +  T  S   F 
Sbjct: 304 LRDLRYSLCRVSFDPESRTFGSVVDTIFQAETEGQSILFPRVSPDGKYLLCTTTSYGTFP 363

Query: 373 IGVMKKD------GSQERLLVEDSNLQAP------TWSPSGRSLIFSRKK 410
           I     D       +  ++  E++N  +P      +WS + + ++FS ++
Sbjct: 364 IWHKDADLCMFDLSTGAQVPTEEAN--SPDTDSYHSWSSNSKWVVFSSRR 411


>gi|256419637|ref|YP_003120290.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Chitinophaga pinensis DSM 2588]
 gi|256034545|gb|ACU58089.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Chitinophaga pinensis DSM 2588]
          Length = 675

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 56/338 (16%), Positives = 117/338 (34%), Gaps = 75/338 (22%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            IT E G     +  +S   ++ + K     M+ DG+    +T     +    R SP+ +
Sbjct: 75  QITKEPGA-EGEVSAISGQKIAYVFKGQRWEMNADGSGATQITTVEGGLQNM-RISPDGK 132

Query: 225 KVAYATYD--------------DEDILRVY------LMDTRIDRAPKRI---GNFRSMIL 261
            + ++                  +  +++Y        DT  D   + I         + 
Sbjct: 133 HILFSKEVKLKKISGSDHYPDLPKSNVQIYDNLNYRHWDTWEDGNFQHIFFATYENGQVG 192

Query: 262 APR----------------------FSSNGKRALISVQK--------DEAMDIYSVDLQS 291
            P                       +S +GK  L   +K            ++Y  +L+S
Sbjct: 193 TPVDIMEGELYDSPQMPFGGAEDVIWSPDGKSILYVTKKKFGKEYATSTNTNVYEYNLES 252

Query: 292 NATERLTNT-LFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRIS 342
           +AT+ L+      N++ ++SPD   +         FE+D   K  + V+      +  ++
Sbjct: 253 HATKNLSEGLAGYNVAPAFSPDGKYLAWLGMAKDGFEAD---KNDIIVLNRTTGARTNLT 309

Query: 343 QDKEASYFDPVWSPQGD---LIAFTKFSGEKFAIGVMK----KDGSQERLLVEDSNLQAP 395
           +D + +     WS        +A  K + +   I + K     +    R + +     + 
Sbjct: 310 KDWDGTVASISWSKDNKQLFFLAVVKGTEQLHEITLQKDVAATNAKHIRQVTDGEFDISG 369

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
               SG +L+ SR  D +  ++L+++ L       + T
Sbjct: 370 IIGQSGNTLVVSRT-DMNHAAELFTVQLPKGILQPLTT 406



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 67/287 (23%), Gaps = 70/287 (24%)

Query: 222 NQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           + + V Y        +    +             +I            + +G++     +
Sbjct: 41  DGKTVIYGVSQYNIAENKSDKDLFAIPLAGGTAIQITKEPGAEGEVS-AISGQKIAYVFK 99

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--------SDREGKEQLY 329
                  + ++   +   ++T       +   SPD   I+F         S  +    L 
Sbjct: 100 G----QRWEMNADGSGATQITTVEGGLQNMRISPDGKHILFSKEVKLKKISGSDHYPDLP 155

Query: 330 VMQS--------------NGSDQKRISQDKE------------------------ASYFD 351
                                + + I                                 D
Sbjct: 156 KSNVQIYDNLNYRHWDTWEDGNFQHIFFATYENGQVGTPVDIMEGELYDSPQMPFGGAED 215

Query: 352 PVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSG 401
            +WSP G  I +           +     +     +    + L E       AP +SP G
Sbjct: 216 VIWSPDGKSILYVTKKKFGKEYATSTNTNVYEYNLESHATKNLSEGLAGYNVAPAFSPDG 275

Query: 402 RSLIFSRK-KDG---DTGSKLYSIDLNGRNETLI-NTPAYASDPQWV 443
           + L +    KDG   D    +      G    L  +     +   W 
Sbjct: 276 KYLAWLGMAKDGFEADKNDIIVLNRTTGARTNLTKDWDGTVASISWS 322


>gi|166365544|ref|YP_001657817.1| hypothetical protein MAE_28030 [Microcystis aeruginosa NIES-843]
 gi|166087917|dbj|BAG02625.1| hypothetical protein MAE_28030 [Microcystis aeruginosa NIES-843]
          Length = 173

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 3/115 (2%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKE 326
           +  + +  ++ +  IY  D        L     ++    S S S D   IVF + R+GK 
Sbjct: 52  RYLVFASDRNGSQAIYLFDAIDRRLLPLPGLNSLDQIASSPSISEDGRYIVFTASRQGKT 111

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +Y+       ++ I+ D  A   +P+ S  G  +AF      ++ I +    G 
Sbjct: 112 AIYLYDRQTQQRREIAPDLLAEVRNPIISADGSKVAFEAAKNGQWDIMIYDLSGR 166



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 12/121 (9%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-----YFDPVWSPQGDLIAFTKFS 367
           S  +VF SDR G + +Y+  +     +R+      +        P  S  G  I FT   
Sbjct: 51  SRYLVFASDRNGSQAIYLFDAID---RRLLPLPGLNSLDQIASSPSISEDGRYIVFTASR 107

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             K AI +  +   Q R +  D   +   P  S  G  + F   K+G     +Y  DL+G
Sbjct: 108 QGKTAIYLYDRQTQQRREIAPDLLAEVRNPIISADGSKVAFEAAKNGQWDIMIY--DLSG 165

Query: 426 R 426
           R
Sbjct: 166 R 166



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 4/115 (3%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +A+ D      +YL D    R     G  +   +  +P  S +G+  + +  +   
Sbjct: 52  RYLVFAS-DRNGSQAIYLFDAIDRRLLPLPGLNSLDQIASSPSISEDGRYIVFTASRQGK 110

Query: 282 MDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             IY  D Q+     +   L   + +   S D S++ FE+ + G+  + +   +G
Sbjct: 111 TAIYLYDRQTQQRREIAPDLLAEVRNPIISADGSKVAFEAAKNGQWDIMIYDLSG 165



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 1/88 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S DQI   P  S + + + +          +YL D +  +  +   +  + +  P  S
Sbjct: 82  LNSLDQIASSPSISEDGRYIVFTASRQGKTA-IYLYDRQTQQRREIAPDLLAEVRNPIIS 140

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT 294
           ++G +      K+   DI   DL     
Sbjct: 141 ADGSKVAFEAAKNGQWDIMIYDLSGRVL 168



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 39/123 (31%), Gaps = 13/123 (10%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G   L     +   +   + +  AS   P  +     + F        AI +        
Sbjct: 22  GYPSLLSFPFDRGGR---TLNSAASELTPYLA--SRYLVFASDRNGSQAIYLFDAI--DR 74

Query: 384 RLLVEDSNLQ------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           RLL             +P+ S  GR ++F+  + G T   LY      R E   +  A  
Sbjct: 75  RLLPLPGLNSLDQIASSPSISEDGRYIVFTASRQGKTAIYLYDRQTQQRREIAPDLLAEV 134

Query: 438 SDP 440
            +P
Sbjct: 135 RNP 137


>gi|20091122|ref|NP_617197.1| cell surface protein [Methanosarcina acetivorans C2A]
 gi|19916223|gb|AAM05677.1| cell surface protein [Methanosarcina acetivorans C2A]
          Length = 1003

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 106/319 (33%), Gaps = 58/319 (18%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y +I G+K  + +       + ++G   + + + +     +  +T +   +  +P     
Sbjct: 257 YPAIYGDKIVWEN---IPGGTPLTGDENHDIHMYNLSTFTVTRITTNNS-LQGDPAIY-- 310

Query: 223 QQKVAYA----TYDDEDILRVYLMDTRIDRAPK---------------RIGNFRSMILAP 263
             ++ +         +D+  +Y+ D       +               +I         P
Sbjct: 311 GDRIVWTDARNAVSYDDLSDIYMYDLSTSTETRITTAKEEQMAQGTETQITTNEGEQERP 370

Query: 264 RFSSNGKRALISVQKDEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                G R + +  ++         DIY  D+ ++   R+T+        +      +IV
Sbjct: 371 AIY--GDRIVWTDWRNGNRHDFLNGDIYMYDISTSTETRITSNESSQSRPAIY--GDRIV 426

Query: 318 FESDREGK-----EQLYVMQSNGSDQKRISQDKEASYFDPVWSP--QGDLIAFTKFSGEK 370
           +   R          +Y+     S + +IS    A      +SP   GD I +  +  + 
Sbjct: 427 WADYRNDNGSYMISDIYMYDLFSSTETQISTSGSA------YSPAIYGDRIVWMDYRNDN 480

Query: 371 -----FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD---TGSKLYSID 422
                + I +      +E  +    +  +P     G  +++   ++GD       +Y  D
Sbjct: 481 GSYTNYDIYMYDLSTHKETQISTSGSAYSPAI--YGDRIVWYDSRNGDDYNPNWNIYMYD 538

Query: 423 LNGRNETLINTPAYASDPQ 441
           L    ET I+T   A  P 
Sbjct: 539 LFSSKETQISTSGSAYSPA 557



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 95/322 (29%), Gaps = 55/322 (17%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+ Y +            +       +G     +     D +N    T       + P  
Sbjct: 205 DEEYHNDFARAPFIYGNRIVYEAETETGNYLIKM----YDLSNSTEQTIGLVDEAYYPAI 260

Query: 220 SPNQQKVAYATYDDEDILRV-----YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
                K+ +        L         M         RI    S+   P     G R + 
Sbjct: 261 Y--GDKIVWENIPGGTPLTGDENHDIHMYNLSTFTVTRITTNNSLQGDPAIY--GDRIVW 316

Query: 275 S-----VQKDEAMDIYSVDLQS----------------NATERLTNTLFINISASYSPDS 313
           +     V  D+  DIY  DL +                    ++T         +     
Sbjct: 317 TDARNAVSYDDLSDIYMYDLSTSTETRITTAKEEQMAQGTETQITTNEGEQERPAIY--G 374

Query: 314 SQIVFESDREGKEQ------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +IV+   R G         +Y+   + S + RI+ ++ +     ++   GD I +  + 
Sbjct: 375 DRIVWTDWRNGNRHDFLNGDIYMYDISTSTETRITSNESSQSRPAIY---GDRIVWADYR 431

Query: 368 GEK-----FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD---TGSKLY 419
            +        I +     S E  +    +  +P     G  +++   ++ +   T   +Y
Sbjct: 432 NDNGSYMISDIYMYDLFSSTETQISTSGSAYSPAI--YGDRIVWMDYRNDNGSYTNYDIY 489

Query: 420 SIDLNGRNETLINTPAYASDPQ 441
             DL+   ET I+T   A  P 
Sbjct: 490 MYDLSTHKETQISTSGSAYSPA 511



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 67/175 (38%), Gaps = 23/175 (13%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R +     + + DI   D+  +   ++TN      +        +IV++  R G + ++
Sbjct: 45  DRIVWQDDSNGSWDIQMYDIYDSTKTQITNNEADQQNPDIY--GDRIVWQDSRNGNQDVF 102

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +   + S + +I+   E+    P     GD I +         I +     S+E  +  +
Sbjct: 103 MYDISISREVQITT-SESYQGKPAI--YGDKIVWEDDRNGNRDIYMYDISTSKETRITNN 159

Query: 390 SNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           ++ Q+   SP   G  ++++ +        +Y  +++   ET +        P W
Sbjct: 160 TSDQS---SPDIYGDRIVWTEE------GAIYMYNISTSTETQVT-------PHW 198



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 80/235 (34%), Gaps = 28/235 (11%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             ++ +    + +   V++ D  I R  + I    S    P     G + +    ++   
Sbjct: 86  GDRIVWQDSRNGN-QDVFMYDISISREVQ-ITTSESYQGKPAIY--GDKIVWEDDRNGNR 141

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           DIY  D+ ++   R+TN      S        +IV+  +      +Y+   + S + +++
Sbjct: 142 DIYMYDISTSKETRITNNTSDQSSPDIY--GDRIVWTEE----GAIYMYNISTSTETQVT 195

Query: 343 Q---------DKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     ++  + F       G+ I +  +     + I +     S E+ +      
Sbjct: 196 PHWWGWEGWDEEYHNDFARAPFIYGNRIVYEAETETGNYLIKMYDLSNSTEQTIGLVDEA 255

Query: 393 QAPTWSPSGRSLIFSRKKD-----GDTGSKLYSIDLNGRNETLINT-PAYASDPQ 441
             P     G  +++          GD    ++  +L+    T I T  +   DP 
Sbjct: 256 YYPAI--YGDKIVWENIPGGTPLTGDENHDIHMYNLSTFTVTRITTNNSLQGDPA 308



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 78/220 (35%), Gaps = 16/220 (7%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +  RI+++     +G   N    M  D +  +    S     + P       ++ +   
Sbjct: 466 IYGDRIVWMDYRNDNGSYTNYDIYM-YDLSTHKETQISTSGSAYSPAIY--GDRIVWYDS 522

Query: 232 DDED----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            + D       +Y+ D    +  +   +      +P      +   I  ++    DIY  
Sbjct: 523 RNGDDYNPNWNIYMYDLFSSKETQISTS--GSAYSPAAIYEDRIVWIDTRRTGGKDIYMY 580

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDK 345
           DL +    R+T ++  +  A Y     +IV++ +R   G  ++Y+   + S + +I+ ++
Sbjct: 581 DLSTATETRITTSVSASNLAIYD---DRIVWDENRRFNGNPEIYMWNLSTSTESKITSNE 637

Query: 346 EASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                  V  P   GD I +         I +     ++ 
Sbjct: 638 PYQSVIYVALPAIYGDRIVWDDNRNGNADIYMFTLASAEV 677



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 78/231 (33%), Gaps = 35/231 (15%)

Query: 223 QQKVAYATYDDEDILR----VYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISV 276
             ++ +A Y +++       +Y+ D       +   +         +S    G R +   
Sbjct: 422 GDRIVWADYRNDNGSYMISDIYMYDLFSSTETQISTS------GSAYSPAIYGDRIVWMD 475

Query: 277 QKDEA-----MDIYSVDLQSNATERLTNTLFINISASYSPD--SSQIVFESDREG----- 324
            +++       DIY  DL ++   +++ +       +YSP     +IV+   R G     
Sbjct: 476 YRNDNGSYTNYDIYMYDLSTHKETQISTSGS-----AYSPAIYGDRIVWYDSRNGDDYNP 530

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQE 383
              +Y+     S + +IS    A     ++    D I +          I +     + E
Sbjct: 531 NWNIYMYDLFSSKETQISTSGSAYSPAAIY---EDRIVWIDTRRTGGKDIYMYDLSTATE 587

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +    +            +++   +  +   ++Y  +L+   E+ I + 
Sbjct: 588 TRITTSVSASNLAIYDD--RIVWDENRRFNGNPEIYMWNLSTSTESKITSN 636


>gi|124514999|gb|EAY56510.1| protein of unknown function [Leptospirillum rubarum]
          Length = 439

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 89/280 (31%), Gaps = 62/280 (22%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYL----MDTRIDRAPKRIGNFRSMILA------- 262
           +  P FSP+ Q ++Y    D D L        +     R  +   + +  ++A       
Sbjct: 17  ILLPSFSPDGQMISYIRLTDPDALNELRDLGCLTVVDARTQEEKLDIKGDLVALNYRERG 76

Query: 263 -------PRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLF---INIS 306
                  P +S + +                   +Y  D+ +    R+   +    IN  
Sbjct: 77  RGYLDLVPVWSPDSRFVYFHYDDPAWESIGPRWSLYRADMTTGQVIRMPFPIEEYRINT- 135

Query: 307 ASYSPDSSQIVFESDREGKE-----------------QLYVMQSNGSDQKRI------SQ 343
              SP   +I   S +  K                  QL V  + G +   +        
Sbjct: 136 IEVSPSGKRIALNSRQRWKPYEKRFFWKTTKRMILADQLVVADNGGENPVNVVEWPKDRY 195

Query: 344 DKEASYFDPVWSPQGDLIAF-TKFSGEKFA----IGVMKKDGSQERLLVEDS-NLQAPTW 397
             +    D  WSP  DL+ +  +F   ++     + +        R L   S ++   +W
Sbjct: 196 RHQEELGDFHWSPVDDLLVYIVRFRENRYKEESFLYLYDPGTGVVRELFRTSEHIDHFSW 255

Query: 398 SPSGRSLIF----SRKKDGDTGSKLYSI-DLNGRNETLIN 432
           SP G+++ F     R +       LY I  ++G    L +
Sbjct: 256 SPDGQTIFFHTRDPRSQKSSRRYSLYRIQPVSGETVRLTD 295



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 86/253 (33%), Gaps = 37/253 (14%)

Query: 192 SLCVMDRDGANIRYLTP------SRDQILFEPRFSPNQQKVAYATYDDEDILR----VYL 241
            L V D  G N   +           + L +  +SP    + Y     E+  +    +YL
Sbjct: 173 QLVVADNGGENPVNVVEWPKDRYRHQEELGDFHWSPVDDLLVYIVRFRENRYKEESFLYL 232

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATE 295
            D       + +      I    +S +G+      +            +Y +   S  T 
Sbjct: 233 YDPGTG-VVRELFRTSEHIDHFSWSPDGQTIFFHTRDPRSQKSSRRYSLYRIQPVSGETV 291

Query: 296 RLTNT--LFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           RLT+    F  ++ +     +Q++ E+    G   + ++ S+  + + + +     Y  P
Sbjct: 292 RLTDHQEFFYPMTPA---RGNQVLLETHLEAGGRGISLLDSSTGNIQTVVKTGYNLY--P 346

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKD-------GSQERLL-----VEDSNLQAPTWSPS 400
           VWSP G+   + +   +         +       G     L             P +SP 
Sbjct: 347 VWSPTGESFVYLRTKPDAKPFWTWPAEPVLQFVKGGPPVKLAPVDSSARLTNCRPAFSPD 406

Query: 401 GRSLIFSRKKDGD 413
           GR+++F  K + +
Sbjct: 407 GRTILFVAKDESE 419



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 92/282 (32%), Gaps = 54/282 (19%)

Query: 174 NSRILFVSESVV---SGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +SR ++         S   + SL   D   G  IR   P  +  +     SP+ +++A  
Sbjct: 89  DSRFVYFHYDDPAWESIGPRWSLYRADMTTGQVIRMPFPIEEYRINTIEVSPSGKRIALN 148

Query: 230 TY-----------------------------DDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +                                E+ + V        R  + +G+F    
Sbjct: 149 SRQRWKPYEKRFFWKTTKRMILADQLVVADNGGENPVNVVEWPKDRYRHQEELGDFH--- 205

Query: 261 LAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
               +S      +  V+  E        +Y  D  +     L  T       S+SPD   
Sbjct: 206 ----WSPVDDLLVYIVRFRENRYKEESFLYLYDPGTGVVRELFRTSEHIDHFSWSPDGQT 261

Query: 316 IVFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSG 368
           I F +          +  LY +Q    +  R++  +E  +F P+   +G+ +   T    
Sbjct: 262 IFFHTRDPRSQKSSRRYSLYRIQPVSGETVRLTDHQE--FFYPMTPARGNQVLLETHLEA 319

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               I ++       + +V+      P WSP+G S ++ R K
Sbjct: 320 GGRGISLLDSSTGNIQTVVKTGYNLYPVWSPTGESFVYLRTK 361



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 74/251 (29%), Gaps = 56/251 (22%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD--------IYSVDLQSNATE------ 295
            +++   +  IL P FS +G+        D            +  VD ++   +      
Sbjct: 7   TEKLVPGKVEILLPSFSPDGQMISYIRLTDPDALNELRDLGCLTVVDARTQEEKLDIKGD 66

Query: 296 ------RLTNTLFINISASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQKRISQ 343
                 R     ++++   +SPDS  + F  D         +  LY          R+  
Sbjct: 67  LVALNYRERGRGYLDLVPVWSPDSRFVYFHYDDPAWESIGPRWSLYRADMTTGQVIRMPF 126

Query: 344 D-KEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVEDSNLQAPT- 396
             +E        SP G  IA           ++F     K+    ++L+V D+  + P  
Sbjct: 127 PIEEYRINTIEVSPSGKRIALNSRQRWKPYEKRFFWKTTKRMILADQLVVADNGGENPVN 186

Query: 397 -------------------WSP-SGRSLIFSRKKDGDTGSK--LYSID-LNGRNETLINT 433
                              WSP     +   R ++     +  LY  D   G    L  T
Sbjct: 187 VVEWPKDRYRHQEELGDFHWSPVDDLLVYIVRFRENRYKEESFLYLYDPGTGVVRELFRT 246

Query: 434 PAYASDPQWVG 444
             +     W  
Sbjct: 247 SEHIDHFSWSP 257


>gi|108760758|ref|YP_633450.1| S9C family peptidase [Myxococcus xanthus DK 1622]
 gi|108464638|gb|ABF89823.1| peptidase, S9C (acylaminoacyl-peptidase) subfamily [Myxococcus
           xanthus DK 1622]
          Length = 711

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 66/169 (39%), Gaps = 8/169 (4%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI 316
           + +L   FSS+ KR L S  +    +++SV +      +LT +T   +I+ +Y P   ++
Sbjct: 121 TSVLGASFSSDEKRVLYSSNETGVFNVFSVPVTGGKPTQLTRSTQDASIAVAYFPTDDRV 180

Query: 317 VFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFA 372
           +F  D  G E   LYV   +G  +K ++   E       WS  G    +   +       
Sbjct: 181 LFTRDSGGNELVHLYVRTLDG-QEKDLTPGDEHRASFFGWSQDGAAFYVLTNERDARFQD 239

Query: 373 IGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKD-GDTGSKLY 419
           +           LL    +   P   SP  + L   + +   D+   LY
Sbjct: 240 LYRYDAKTYARTLLYAGDSEHVPGALSPDEKWLALEKSRTLSDSDVYLY 288



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 292 NATERLTNTLFINI----SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
              +R T   F+       AS+S D  ++++ S+  G   ++ +   G    ++++  + 
Sbjct: 107 GPEKRYTVEQFMETTSVLGASFSSDEKRVLYSSNETGVFNVFSVPVTGGKPTQLTRSTQD 166

Query: 348 SYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSL 404
           +     + P  D + FT+ SG      + V   DG ++ L   D +  +   WS  G + 
Sbjct: 167 ASIAVAYFPTDDRVLFTRDSGGNELVHLYVRTLDGQEKDLTPGDEHRASFFGWSQDGAAF 226

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGF 445
                +       LY  D      TL+          A + D +W+  
Sbjct: 227 YVLTNERDARFQDLYRYDAKTYARTLLYAGDSEHVPGALSPDEKWLAL 274



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 66/225 (29%), Gaps = 10/225 (4%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G       F   +         L   D      R L  + D        SP+++ +A   
Sbjct: 218 GWSQDGAAFYVLTNERDARFQDLYRYDAKTY-ARTLLYAGDSEHVPGALSPDEKWLALEK 276

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRALISVQKDEAMDIYSVD 288
                   VYL +    +  + +      +   A  F      AL  +  + +  I    
Sbjct: 277 SRTLSDSDVYLYE-FATQQRRHLTAHEGSVSWKAATFDP-ASSALYLLTNEGSEFIRVER 334

Query: 289 --LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
             L +   E +    +  +S  +S   +  +   + +G+  L V       +  +    E
Sbjct: 335 HVLATRKRELVEQVEWDVLSTVFSRRGAWRITRVNEDGRTTLRVHDVKAGRRVSLPGIPE 394

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLVED 389
            +      S     +AF    G++    + V   +  +   L + 
Sbjct: 395 GAISGVSLSRGEKRMAF-HVDGDRSPGNLYVYDFETKKLTRLTDT 438



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 85/252 (33%), Gaps = 9/252 (3%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  +   G     LT S         + P   +V +      + L    + T   +    
Sbjct: 147 VFSVPVTGGKPTQLTRSTQDASIAVAYFPTDDRVLFTRDSGGNELVHLYVRTLDGQEKDL 206

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASY 309
                       +S +G  A   +  +      D+Y  D ++ A   L      ++  + 
Sbjct: 207 TPGDEHRASFFGWSQDGA-AFYVLTNERDARFQDLYRYDAKTYARTLLYAGDSEHVPGAL 265

Query: 310 SPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFS 367
           SPD   +  E  R      +Y+ +     ++ ++  +   S+    + P    +      
Sbjct: 266 SPDEKWLALEKSRTLSDSDVYLYEFATQQRRHLTAHEGSVSWKAATFDPASSALYLLTNE 325

Query: 368 GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G +F         +++R LVE    ++ +  +S  G   I    +DG T  +++ +   G
Sbjct: 326 GSEFIRVERHVLATRKRELVEQVEWDVLSTVFSRRGAWRITRVNEDGRTTLRVHDVKA-G 384

Query: 426 RNETLINTPAYA 437
           R  +L   P  A
Sbjct: 385 RRVSLPGIPEGA 396



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 30/79 (37%), Gaps = 3/79 (3%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-D 283
           ++     D    LRV+  D +  R     G     I     S   KR    V  D +  +
Sbjct: 364 RITRVNEDGRTTLRVH--DVKAGRRVSLPGIPEGAISGVSLSRGEKRMAFHVDGDRSPGN 421

Query: 284 IYSVDLQSNATERLTNTLF 302
           +Y  D ++    RLT+TL 
Sbjct: 422 LYVYDFETKKLTRLTDTLG 440


>gi|67923713|ref|ZP_00517179.1| similar to Periplasmic component of the Tol biopolymer transport
           system [Crocosphaera watsonii WH 8501]
 gi|67854421|gb|EAM49714.1| similar to Periplasmic component of the Tol biopolymer transport
           system [Crocosphaera watsonii WH 8501]
          Length = 177

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 3/126 (2%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSP 311
           N R     P  S +G+   +   ++ + +I   DL+     +L        I  S S S 
Sbjct: 34  NSRYNDQQPALSGDGRWLALVSNRNNSNEILLYDLRGKKFIQLPGLNQGNVILESPSLSR 93

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
               +V+ S  +G+  + +        + ++Q+      +P  S  G  I F      ++
Sbjct: 94  TGRYLVYISSVQGRPDVAIYDRATRRAEILTQNYRNWVRNPQISADGRYIVFETARRGQW 153

Query: 372 AIGVMK 377
            I V+ 
Sbjct: 154 DIEVLD 159



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 44/124 (35%), Gaps = 4/124 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSP 356
           N+ + +   + S D   +   S+R    ++ +    G    ++    + +     P  S 
Sbjct: 34  NSRYNDQQPALSGDGRWLALVSNRNNSNEILLYDLRGKKFIQLPGLNQGNVILESPSLSR 93

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDT 414
            G  + +      +  + +  +   +  +L ++       P  S  GR ++F   + G  
Sbjct: 94  TGRYLVYISSVQGRPDVAIYDRATRRAEILTQNYRNWVRNPQISADGRYIVFETARRGQW 153

Query: 415 GSKL 418
             ++
Sbjct: 154 DIEV 157



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 8/106 (7%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNL--QAPTW 397
           + +   +   P  S  G  +A          I +    G +   L  +   N+  ++P+ 
Sbjct: 32  TLNSRYNDQQPALSGDGRWLALVSNRNNSNEILLYDLRGKKFIQLPGLNQGNVILESPSL 91

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYASDPQ 441
           S +GR L++     G     +Y  D   R   ++      +  +PQ
Sbjct: 92  SRTGRYLVYISSVQGRPDVAIY--DRATRRAEILTQNYRNWVRNPQ 135



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 3/107 (2%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           V +    N + + D  G     L      + IL  P  S   + + Y +        V +
Sbjct: 54  VSNRNNSNEILLYDLRGKKFIQLPGLNQGNVILESPSLSRTGRYLVYISSVQGRP-DVAI 112

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            D    RA     N+R+ +  P+ S++G+  +    +    DI  +D
Sbjct: 113 YDRATRRAEILTQNYRNWVRNPQISADGRYIVFETARRGQWDIEVLD 159


>gi|309792791|ref|ZP_07687234.1| WD40 repeat, subgroup [Oscillochloris trichoides DG6]
 gi|308225155|gb|EFO78940.1| WD40 repeat, subgroup [Oscillochloris trichoides DG6]
          Length = 1180

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 90/255 (35%), Gaps = 25/255 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A  R      D+ +    +SP+ + +A  + D    + V  +D R      R     S+I
Sbjct: 716 APSRKFLHRHDEQITVIAYSPDGRTIASGSSD--SHVVVSNLDNRSGAFTYR--EHTSLI 771

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               FS + ++  +S   D    I+           L       + A + P S+Q+V   
Sbjct: 772 TGLHFSPDSRQI-MSSSNDNTAQIWIPFNTKKNPLILRGHEGWVLDARFIPGSNQVV-TI 829

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            R+G   L     +      I  +          SP G  +A          + + +  G
Sbjct: 830 GRDGS--LRHWNISHPQATTIIYEHNREVSAVAASPDGRWMATGSIDKT---VALWEVQG 884

Query: 381 SQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI--------DLNGRNET 429
            Q  L   L   S++    +SP GR +  S  +DG    +++ +         ++   + 
Sbjct: 885 DQVALRAKLASTSSIWWIAFSPDGRLVA-SANEDGK--IRIWQVEQPEEPLQTIDAHPDR 941

Query: 430 LINTPAYASDPQWVG 444
           +    A++ D +++ 
Sbjct: 942 VATALAFSPDGRYLA 956



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 56/373 (15%), Positives = 120/373 (32%), Gaps = 71/373 (19%)

Query: 106  LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY-- 163
            +G    VT   I    D++ + +         Q+    F S  A  RK  H   + I   
Sbjct: 679  IGIAQDVTALAISPSGDQIAIGY------LNGQVDTMTFASGSAPSRKFLHRHDEQITVI 732

Query: 164  ----QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG------------------- 200
                   T   G  +S ++  +    SG            G                   
Sbjct: 733  AYSPDGRTIASGSSDSHVVVSNLDNRSGAFTYREHTSLITGLHFSPDSRQIMSSSNDNTA 792

Query: 201  -----ANIR---YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
                  N +    +    +  + + RF P   +V            +   +    +A   
Sbjct: 793  QIWIPFNTKKNPLILRGHEGWVLDARFIPGSNQVV----TIGRDGSLRHWNISHPQATTI 848

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSP 311
            I      + A   S +G+    +   D+ + ++ V     A   +L +T  I    ++SP
Sbjct: 849  IYEHNREVSAVAASPDGRWMA-TGSIDKTVALWEVQGDQVALRAKLASTSSI-WWIAFSP 906

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            D  ++V  ++ +GK +++ ++      + I    +       +SP G  +A   + G +F
Sbjct: 907  DG-RLVASANEDGKIRIWQVEQPEEPLQTIDAHPDRVATALAFSPDGRYLASVGYDG-RF 964

Query: 372  AIGVMKKDGSQERLLVEDSNLQ-------AP------TWSPSGRSLIFSRKKDGDTGSKL 418
             +  +       +LL   +  +       +P      ++S  GR +  +         ++
Sbjct: 965  HLWEIS------QLLTTGALTEVATAFTPSPKALQSISFSEDGRYVAIAGDSG---EIQI 1015

Query: 419  YSI-DLNGRNETL 430
            + + +L    + L
Sbjct: 1016 WDMQNLQAEPQRL 1028



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 78/232 (33%), Gaps = 31/232 (13%)

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             K  +  +++    ++ +    D++     FSP+ + +A   YD    L           
Sbjct: 918  GKIRIWQVEQPEEPLQTIDAHPDRVATALAFSPDGRYLASVGYDGRFHLWEISQLLTTGA 977

Query: 249  APKRIGNF---RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +    F      + +  FS +G+   I+      + I+ +       +RL       +
Sbjct: 978  LTEVATAFTPSPKALQSISFSEDGRYVAIAGD-SGEIQIWDMQNLQAEPQRL------QV 1030

Query: 306  SASYSPDSSQIVFESDREGKE----------QLYVMQSNGSDQ-KRISQDKEASYFDPVW 354
               Y+     + F   R G            ++Y+   NG D+  RI            +
Sbjct: 1031 GGIYA-----VAF---RPGHPGQLAAAGFEAKIYLWDLNGPDRNPRIYSGHTDWIIGLAF 1082

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
            S  G  +A +  + +   + +    G    +L    ++ +   +S  G+ +I
Sbjct: 1083 SADGQTMA-SASNDDTVRVWMPDLPGGDPLVLRGHTADAKTVAFSRDGKWVI 1133



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 49/348 (14%), Positives = 110/348 (31%), Gaps = 29/348 (8%)

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
           + L +  LV G +  +          L       Q+          + +++  TI  +  
Sbjct: 496 SQLASAALVDGSIRPQRS--------LLQALASYQLESNSIADGEEALQQLLTTIGGEPE 547

Query: 164 QSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
              T         +  ++ +     +G  +  L  +   G  +R  + + + IL     S
Sbjct: 548 PLATSPNIATLNTDGSLIAIYHEGDAGQNQIVLQAIGPAGREVRR-SIALNTILSNLALS 606

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +A  +    +   + L          ++      I A  FS +G    +      
Sbjct: 607 PDGSLIAAIS----NAGDLLLWGDDGQTRSIQLPADIGSISAISFSQDGATFGVGDSTGR 662

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +    + DL    +E +   +  +++A + SP   QI       G+       S  +  +
Sbjct: 663 SFLWSTADLNRAPSEFI--GIAQDVTALAISPSGDQIA-IGYLNGQVDTMTFASGSAPSR 719

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQAPTW 397
           +     +       +SP G  IA          + V   D            S +    +
Sbjct: 720 KFLHRHDEQITVIAYSPDGRTIASGSSDS---HVVVSNLDNRSGAFTYREHTSLITGLHF 776

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           SP  R ++ S     D  ++++      +N  ++     +  D +++ 
Sbjct: 777 SPDSRQIMSSSN---DNTAQIWIPFNTKKNPLILRGHEGWVLDARFIP 821


>gi|299739680|ref|XP_001839707.2| peptidase C14 [Coprinopsis cinerea okayama7#130]
 gi|298403890|gb|EAU82103.2| peptidase C14 [Coprinopsis cinerea okayama7#130]
          Length = 1526

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 95/286 (33%), Gaps = 29/286 (10%)

Query: 158  ISDDIYQSITGEKGDFNSRILFVSES-----VVSGIIKNSLCVMDR-DGANIRYLTPSRD 211
             + D  + +        S +  V+ S     + SG   N++ + D   G  +        
Sbjct: 884  FNADTGEYLLPPMQGHTSPVASVAFSPDGSCIASGCHGNTVRIWDAHSGKALFEPIQGHT 943

Query: 212  QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            + +    FSP+  ++A  + D  + +R++   +         G+    + +  FS +G R
Sbjct: 944  KKVTSVAFSPDGSRIASGSRD--NTVRIWSAHSGEALLEPMKGHTDG-VRSVAFSPDGTR 1000

Query: 272  ALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
               S  +D  + I+  D  S     + +        S ++SPD S I       G + + 
Sbjct: 1001 IA-SGSEDHTICIW--DAYSGKLLLDPMQEHAETVTSVAFSPDGSCIAIAW---GDDTIR 1054

Query: 330  VMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +  ++  +      Q          +SP G  IA          I +      +      
Sbjct: 1055 IWDAHSGEVLFEPMQGHTERITSIAFSPDGSRIASGSRDNT---IRIWDALSGEALFEPM 1111

Query: 389  DSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              + +   +  +SP G  ++      G     +   D + R   L 
Sbjct: 1112 HGHTETVSSVAFSPDGSYIV-----SGSYDKTIRIWDAHSRKALLP 1152



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 59/383 (15%), Positives = 123/383 (32%), Gaps = 58/383 (15%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVL---------VTGRVIKEGKDRLRVE----- 127
            I+      +I +       + W++L  + L             V         V      
Sbjct: 1078 IAFSPDGSRIASGSRDNTIRIWDALSGEALFEPMHGHTETVSSVAFSPDGSYIVSGSYDK 1137

Query: 128  -FRLWDVKDRKQII--------GKKFFSSPASWRKIAHTISDDIY--------QSITGEK 170
              R+WD   RK ++        G    +       IA   SD+          +++    
Sbjct: 1138 TIRIWDAHSRKALLPLMQWHTEGVTSVAFSPDGSGIASGSSDNTICIWDAYSGKALFEPI 1197

Query: 171  GDFNSRILFVSE-----SVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQ 224
                 ++  V+       + SG   N++ +     G  +          +    FSP+  
Sbjct: 1198 QGHTKKVTSVAFSPDGSRIASGSRDNTVRIWSAHSGEALLEPMKGYTDGVRSVAFSPDGT 1257

Query: 225  KVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            ++A  + D      + + D    +   + I   +  + +  FS +G R + S   DE + 
Sbjct: 1258 RIASGSEDH----TICIWDAHSGKPLLEPIQRHKGCVTSVAFSPDGSRIV-SGSFDETIR 1312

Query: 284  IYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            I   +  S     L N ++ +     S ++SPD  +IV  S       + +  ++  +  
Sbjct: 1313 IR--NAYSGKA--LLNPMWAHTNYVASVAFSPDGFRIVSGSY---DATINIWDAHSGNLL 1365

Query: 340  R-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
              + Q          +SP G  +A                 G  E +    + + +  +S
Sbjct: 1366 LELMQKHAEPITSVAFSPDGTCVASGSDDSTIRIWDAHSGKGLLEPMEGHTNGVTSVAFS 1425

Query: 399  PSGRSLIFSRKKDGDTGSKLYSI 421
            P+G  +        D   +L+++
Sbjct: 1426 PNGSCIASGSH---DKTVRLWTL 1445



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 71/222 (31%), Gaps = 13/222 (5%)

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G     +      G  +        + +    FSP+  ++A  + D  + +R++      
Sbjct: 1049 GDDTIRIWDAHS-GEVLFEPMQGHTERITSIAFSPDGSRIASGSRD--NTIRIW-DALSG 1104

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTN-TLFIN 304
            +   + +      + +  FS +G   + S   D+ + I+  D  S      L        
Sbjct: 1105 EALFEPMHGHTETVSSVAFSPDGSYIV-SGSYDKTIRIW--DAHSRKALLPLMQWHTEGV 1161

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SPD S I   S       + +  + +G       Q          +SP G  IA 
Sbjct: 1162 TSVAFSPDGSGIASGSS---DNTICIWDAYSGKALFEPIQGHTKKVTSVAFSPDGSRIAS 1218

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                           +   E +      +++  +SP G  + 
Sbjct: 1219 GSRDNTVRIWSAHSGEALLEPMKGYTDGVRSVAFSPDGTRIA 1260



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 49/154 (31%), Gaps = 5/154 (3%)

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            I +    + +  +S +G+   +    D  + +++ D        +        S ++SPD
Sbjct: 853  IHSQHGGVYSVAYSPDGRSVAVGCS-DGVVAVFNADTGEYLLPPMQGHTSPVASVAFSPD 911

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             S I   S   G   + +  ++         Q          +SP G  IA         
Sbjct: 912  GSCIA--SGCHGNT-VRIWDAHSGKALFEPIQGHTKKVTSVAFSPDGSRIASGSRDNTVR 968

Query: 372  AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                   +   E +      +++  +SP G  + 
Sbjct: 969  IWSAHSGEALLEPMKGHTDGVRSVAFSPDGTRIA 1002


>gi|218438221|ref|YP_002376550.1| hypothetical protein PCC7424_1234 [Cyanothece sp. PCC 7424]
 gi|218170949|gb|ACK69682.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 1188

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 88/273 (32%), Gaps = 24/273 (8%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +AH  S+ I    T   G   S         + +G     + +   + +   +       
Sbjct: 548 LAH--SNLIECRFTQTFGAIYSVAFSPDGQLMATGNRHGEIWLWQIEDSQPLFTCKGHTN 605

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            ++   FS N + +   + D      + L +    +  K +    + + A   S +G   
Sbjct: 606 WVWSIVFSRNGEILISGSTDQ----TIRLWNVSNGQCLKILSQHTNGVYAIALSPDGNIL 661

Query: 273 LISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQ-LYV 330
                  +   I    L       L+ +      S +YSPD   +       G +Q + +
Sbjct: 662 A---SGGDEQVIKFSTLSEGQLLNLSLHHNCGIRSIAYSPDGRFLA----SGGTDQTVRI 714

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED- 389
              +     +         +   +SP G L+A     G+   + +      +    +   
Sbjct: 715 WDLSKGQCLKTLSGHLNWVWSVAFSPDGQLLA---SGGDDPRVRIWDVQTGECIKTLSGH 771

Query: 390 -SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            ++L++  +SP G+ L        D   +++ +
Sbjct: 772 LTSLRSVVFSPDGQRLA---SGSADQTVRIWDV 801



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 71/218 (32%), Gaps = 16/218 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + +        +       ++    SP+   +A       D   +      
Sbjct: 621 SGSTDQTIRLWNVSNGQCLKILSQHTNGVYAIALSPDGNILA----SGGDEQVIKFSTLS 676

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             +      +    I +  +S +G+    S   D+ + I+  DL      + L+  L   
Sbjct: 677 EGQLLNLSLHHNCGIRSIAYSPDGRFLA-SGGTDQTVRIW--DLSKGQCLKTLSGHLNWV 733

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPD   +    D     ++ +      +  +       S    V+SP G  +A  
Sbjct: 734 WSVAFSPDGQLLASGGD---DPRVRIWDVQTGECIKTLSGHLTSLRSVVFSPDGQRLASG 790

Query: 365 KFSGEKFAIGVMKKDGSQ-ERLLVEDSNL-QAPTWSPS 400
                   + +      Q  ++L   +N   +  ++PS
Sbjct: 791 SADQT---VRIWDVQTGQCLKILSGHTNWVWSVAFAPS 825



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 84/240 (35%), Gaps = 19/240 (7%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
              G    ++ + +              + ++   FSPN   +A    D      V L D 
Sbjct: 923  SGGGSDCTIKLWNVTSGQCLSTLSGHAEGVWAVEFSPNGSLLASGGTDQ----TVKLWDV 978

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFI 303
            +  +  K +   +  + +  FS++GK  L S   D  + ++  DLQS+     L   L  
Sbjct: 979  KTAQCVKTLEGHQGWVWSVAFSADGK-LLGSGCFDRTVKLW--DLQSSQCLYTLKGHLAE 1035

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              + ++S DS    F +       + +   N     +  Q   +      +SP G  +A 
Sbjct: 1036 VTTVAFSRDSQ---FIASGSTDYSIILWDVNNGQPFKTLQGHTSIVMSVTFSPDGRFLAS 1092

Query: 364  TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              F      I +      +  L++      +++  +S  G  L+       D   KL+ +
Sbjct: 1093 GSFDQT---IRIWDFLTGECLLILQGHTRGIESVGFSRDGCFLV---SGGEDETIKLWQV 1146



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/309 (13%), Positives = 96/309 (31%), Gaps = 23/309 (7%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V    ++ +  EF+L++     +   K +       R +   I+D +   +         
Sbjct: 431 VQDMAQELINQEFQLFNTHALLKTTVKDY-VRETQERLLLDPIADSLRSQLGS-----ML 484

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I    + +++ I ++          N+  L       L     S N   +       + 
Sbjct: 485 AIAQYLQDLLNVIRQSQHYSQSYGPGNLINLCCYLQLDLT----SYNLSNLTIRHGYFQG 540

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           I    +     +    R       I +  FS +G+    +  +   + ++ ++  S    
Sbjct: 541 INLHQVNLAHSNLIECRFTQTFGAIYSVAFSPDGQLMA-TGNRHGEIWLWQIE-DSQPLF 598

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                     S  +S +   ++  S     + + +   +     +I        +    S
Sbjct: 599 TCKGHTNWVWSIVFSRNGEILISGST---DQTIRLWNVSNGQCLKILSQHTNGVYAIALS 655

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGD 413
           P G+++A     G++  I        Q   L    N   ++  +SP GR L        D
Sbjct: 656 PDGNILA---SGGDEQVIKFSTLSEGQLLNLSLHHNCGIRSIAYSPDGRFLA---SGGTD 709

Query: 414 TGSKLYSID 422
              +++ + 
Sbjct: 710 QTVRIWDLS 718



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 44/115 (38%), Gaps = 7/115 (6%)

Query: 175  SRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            + + F  +S  + SG    S+ + D +             I+    FSP+ + +A  ++D
Sbjct: 1037 TTVAFSRDSQFIASGSTDYSIILWDVNNGQPFKTLQGHTSIVMSVTFSPDGRFLASGSFD 1096

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                  + + D         +      I +  FS +G   + S  +DE + ++ V
Sbjct: 1097 Q----TIRIWDFLTGECLLILQGHTRGIESVGFSRDGCFLV-SGGEDETIKLWQV 1146


>gi|332709144|ref|ZP_08429111.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332352055|gb|EGJ31628.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 683

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 92/286 (32%), Gaps = 33/286 (11%)

Query: 101 QDWNSLGAQVLVTGRVIKEGK---DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHT 157
           + W   G   LV G     G           R +     ++I  ++            H 
Sbjct: 344 RRWWLGGILALVVGLFGAGGWLLYKSYNASLRKY-----QEIYAQELSVVDTKT-FTGH- 396

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            S  +   +    G          + +VS     ++ + D +     +     +  +   
Sbjct: 397 -SSWVNYLVISPDG----------QQLVSASADKNIKIWDLNTGEAIHTLEGHNSYVNYL 445

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ Q++  A+ D      + + D    +  + I   +S I    FS +G++   S  
Sbjct: 446 AISPDGQQLFSASADK----TIKIWDLNTGQEIRTIQGHKSYINHLAFSPDGQQL-FSAS 500

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + I+  D+ +    R       +I+      + Q +F +  +  + + +   N  +
Sbjct: 501 ADKTIKIW--DINTGQEIRTIQGHKSSINFLLISQNEQQLFSASAD--KTIKIWDINTGE 556

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +    +  E+       SP G  +           I V   D  +E
Sbjct: 557 ELDTLKGHESFVNSLAISPDGQRLFSASADNT---IKVWNLDTGEE 599



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 82/219 (37%), Gaps = 15/219 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +     SP+ Q++  A+ D      + + D     A   +    S +     
Sbjct: 392 TFTGHSSWVNYLVISPDGQQLVSASADK----NIKIWDLNTGEAIHTLEGHNSYVNYLAI 447

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREG 324
           S +G++   S   D+ + I+  DL +    R +          ++SPD  Q+ F +  + 
Sbjct: 448 SPDGQQL-FSASADKTIKIW--DLNTGQEIRTIQGHKSYINHLAFSPDGQQL-FSASAD- 502

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +   N   + R  Q  ++S    + S     + F+  + +   I  +      + 
Sbjct: 503 -KTIKIWDINTGQEIRTIQGHKSSINFLLISQNEQQL-FSASADKTIKIWDINTGEELDT 560

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           L   +S + +   SP G+ L FS   D     K++++D 
Sbjct: 561 LKGHESFVNSLAISPDGQRL-FSASADNT--IKVWNLDT 596


>gi|172037111|ref|YP_001803612.1| WD repeat-containing protein [Cyanothece sp. ATCC 51142]
 gi|171698565|gb|ACB51546.1| WD-repeat protein [Cyanothece sp. ATCC 51142]
          Length = 354

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 73/229 (31%), Gaps = 19/229 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    ++    S + + +A A +D     ++ + D        R+   +  +LA  
Sbjct: 66  QTFTGNTSGVWSVALSEDGKILASAGHDG----QIRIWDIEQGILLHRLPAEKQAVLAVA 121

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +    L S  +D  +  +  + Q+     +L        S  +S D   ++  S   
Sbjct: 122 FSPD-DSILASSGQDGMIRFW--NWQTGELITQLPGHNKPVRSFVFSSDGQTLISCS--- 175

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +      + ++         F    SP G  IA          I +      + 
Sbjct: 176 WDKTIKIWNWRRGELQQTLTGHSVGVFAIDISPDGQTIASVSKDKT---IKLWDVMTGEL 232

Query: 384 RLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +  +           +SP GR L        DT  KL+ +      ETL
Sbjct: 233 KQTLTGHEDSVRTVAFSPDGRYLATGSN---DTTIKLWQVATGTLIETL 278



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 52/180 (28%), Gaps = 9/180 (5%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               ++ + +     ++         +F    SP+ Q +A  + D      + L D    
Sbjct: 175 SWDKTIKIWNWRRGELQQTLTGHSVGVFAIDISPDGQTIASVSKDK----TIKLWDVMTG 230

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              + +      +    FS +G+    +   D  + ++ V       E L        S 
Sbjct: 231 ELKQTLTGHEDSVRTVAFSPDGRYLA-TGSNDTTIKLWQV-ATGTLIETLNAHESFVNSV 288

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +S D+  ++  S      ++     N     +   D  A       S  G       + 
Sbjct: 289 VFSSDNQTLISASQ---DNKIKRWDLNSLTVLQTFSDHNAPVNSVALSADGHQFVSGSWD 345


>gi|330508311|ref|YP_004384739.1| hypothetical protein MCON_2475 [Methanosaeta concilii GP-6]
 gi|328929119|gb|AEB68921.1| hypothetical protein MCON_2475 [Methanosaeta concilii GP-6]
          Length = 547

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 77/207 (37%), Gaps = 13/207 (6%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  ++ L  S+ + ++   FSP+  K+A ++Y+      + + D       + +  +   
Sbjct: 244 GTLLQQLNCSQYRGVWSVAFSPDGNKLAASSYEGP----LLIWDIASGTELQTLETYDFY 299

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                FS +G +   +V       I   D+ S    +  +   I    ++ P  +++V  
Sbjct: 300 GFRLAFSPDGSKLA-AVTIGSMGRILIYDVNSGEKLQWIDHWAI--LPAFRPSGTELV-T 355

Query: 320 SDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           SD  G   +Y+     G++ + +  +   +      S  G  +A   +     +I     
Sbjct: 356 SD--GDNTIYIWDVIRGTNLETLYTETNRT-MAQAISLDGSKLAACNYDERTVSIW-DTT 411

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +G + + +  +       +S  G  L 
Sbjct: 412 NGVKLQEIELNHPADFAAFSIDGSKLA 438



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 75/228 (32%), Gaps = 46/228 (20%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V  +G + + +    WDV     +    +  +    R +A  IS                
Sbjct: 354 VTSDGDNTIYI----WDVIRGTNLETL-YTETN---RTMAQAIS---------------- 389

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
               +  S ++    +   V   D  N ++      +       FS +  K+A  +    
Sbjct: 390 ----LDGSKLAACNYDERTVSIWDTTNGVKLQEIELNHPADFAAFSIDGSKLALHSM-LR 444

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           D + ++ + +        + +     L+P  FS +G +   +V       I   D+ S  
Sbjct: 445 DEISIWDVKSGTKLREFNLKDNSGSRLSPLAFSPDGSKLA-AVTVGSFDKILIYDVNSGE 503

Query: 294 ----------TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                      ++L N  +     ++S DSS++      +G   ++ +
Sbjct: 504 KLLDLKLNSTLKQLLNGPYAI---AFSLDSSKLA-IGQNDGYVPIWAV 547



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 38/102 (37%), Gaps = 7/102 (6%)

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             G+  ++++  +    +   +SP G+ +A + + G    + +       E   +E  + 
Sbjct: 242 VAGTLLQQLNCSQYRGVWSVAFSPDGNKLAASSYEG---PLLIWDIASGTELQTLETYDF 298

Query: 393 QAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                 +SP G  L  +          +Y ++ +G     I+
Sbjct: 299 YGFRLAFSPDGSKLA-AVTIGSMGRILIYDVN-SGEKLQWID 338


>gi|298241132|ref|ZP_06964939.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297554186|gb|EFH88050.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 438

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 83/224 (37%), Gaps = 23/224 (10%)

Query: 197 DRDGANIRYLTPS-----RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           D D  N  Y  PS         +++  +SP+  +VA+A +D + ++ + + D        
Sbjct: 163 DPDAPNKTYFGPSDTYLDHSGPVYDVAWSPDGTRVAWAGHD-KIVVVLSVYDGVPTYNRN 221

Query: 252 RIGNFRSMIL---APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISA 307
            I  +        A  +S +G R + S   D  + I+  + Q+     LT N     ++ 
Sbjct: 222 SILTYGGHNAAVHAVAWSPDGTRIV-SASSDGTIHIW--NAQTGK-TLLTKNQEGEILAV 277

Query: 308 SYS--PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFT 364
           +++  P    I         + +++  +         Q    + F+  WS  G   IA  
Sbjct: 278 AWAPFPRGEHIA---SGGTHKAVHIWDTTDGHIINTYQKHTGTIFNLAWSSGGSPYIASA 334

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLI 405
              G         K   ++ +L    +   + + TWSP G S+ 
Sbjct: 335 SADGTVQVWDAYDKHADKKNILTYTGHRDAVHSVTWSPDGNSIA 378



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 63/192 (32%), Gaps = 35/192 (18%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ---------SNATERLTNTLFI 303
           I   +S +    +S +GK   IS + +  + +                 +   L +    
Sbjct: 127 IVGLKSPVYGIAWSPDGKHI-ISAENNSTVTLVDTFHDPDAPNKTYFGPSDTYL-DHSGP 184

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR------ISQDK-EASYFDPVWSP 356
               ++SPD +++ +     G +++ V+ S             ++     A+     WSP
Sbjct: 185 VYDVAWSPDGTRVAWA----GHDKIVVVLSVYDGVPTYNRNSILTYGGHNAAVHAVAWSP 240

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPS--GRSLIFSRKKDG 412
            G  I      G    I +      +  LL ++    + A  W+P   G  +       G
Sbjct: 241 DGTRIVSASSDGT---IHIWNAQTGK-TLLTKNQEGEILAVAWAPFPRGEHIA-----SG 291

Query: 413 DTGSKLYSIDLN 424
            T   ++  D  
Sbjct: 292 GTHKAVHIWDTT 303



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 46/151 (30%), Gaps = 19/151 (12%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--------DKEASYFDPVWSPQGD 359
           ++SPD   I+  S         V   +  D    +         D     +D  WSP G 
Sbjct: 138 AWSPDGKHII--SAENNSTVTLVDTFHDPDAPNKTYFGPSDTYLDHSGPVYDVAWSPDGT 195

Query: 360 LIAFTKFSGEKFAIGVMK--KDGSQERLLVEDSNL---QAPTWSPSGRSLIFSRKKDGDT 414
            +A+         + V       ++  +L    +     A  WSP G  ++ +     D 
Sbjct: 196 RVAWAGHDKIVVVLSVYDGVPTYNRNSILTYGGHNAAVHAVAWSPDGTRIVSASS---DG 252

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
              +++    G+     N         W  F
Sbjct: 253 TIHIWNA-QTGKTLLTKNQEGEILAVAWAPF 282



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 46/143 (32%), Gaps = 13/143 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D    +I          +F   +S       Y      D          
Sbjct: 290 SGGTHKAVHIWDTTDGHIINTYQKHTGTIFNLAWSSGGS--PYIASASADGTVQVWDAYD 347

Query: 246 IDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYS----VDLQSNATERLT 298
                K I  +      + +  +S +G     S   D  + I+S    +   S +  ++ 
Sbjct: 348 KHADKKNILTYTGHRDAVHSVTWSPDGNSIA-SGSTDGTVHIWSTKNPMKESSTSLYQV- 405

Query: 299 NTLFINISASYSPDSSQIVFESD 321
               +N+ A +SPD S I   SD
Sbjct: 406 -GSAVNVVA-WSPDGSYIASGSD 426


>gi|158341560|ref|YP_001522724.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158311801|gb|ABW33410.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 346

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 93/242 (38%), Gaps = 22/242 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E++ SG     + + +     +R    + +  +     S + Q +   ++D+    R+ L
Sbjct: 72  ETLASGSYDGKINLWNLQTGKLRATLNAHEDAVSSLAISSDGQTLVSGSWDN----RIDL 127

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            + +       +      + A   + +GK    +   D+ + ++  +L++    R+  T 
Sbjct: 128 WNLQTGEHLHTLDEAEDDVSAIALTPDGKYLA-ASAADKNLRLW--NLKTGELIRIQPTP 184

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA---SYFDPVWSPQG 358
              +S ++SPD   +   S R+G  + +       +Q  ++   E    +     +SP G
Sbjct: 185 EDVLSLAFSPDGQTLASGS-RDGVIRFWQ-----REQLALTFSLEGHKSAVKSVSFSPDG 238

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             +A +    +   +   +  G   ++L      + +  +SP GRSL        D   K
Sbjct: 239 QYLA-SGSQDQSVKVW-QRHQGKLLKILKGHTEPVLSVAFSPDGRSLASGSY---DRSIK 293

Query: 418 LY 419
           L+
Sbjct: 294 LW 295



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 81/209 (38%), Gaps = 23/209 (11%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                 S ++ ++    SP+ + +A  +YD +    + L + +  +    +      + +
Sbjct: 51  AMQTLKSHNKWVYAISISPDGETLASGSYDGK----INLWNLQTGKLRATLNAHEDAVSS 106

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESD 321
              SS+G+  + S   D  +D++  +LQ+       +    ++SA + +PD   +   + 
Sbjct: 107 LAISSDGQTLV-SGSWDNRIDLW--NLQTGEHLHTLDEAEDDVSAIALTPDGKYLAASA- 162

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               + L +      +  RI    E       +SP G  +A     G      V++    
Sbjct: 163 --ADKNLRLWNLKTGELIRIQPTPE-DVLSLAFSPDGQTLASGSRDG------VIRFWQR 213

Query: 382 QERLLV-----EDSNLQAPTWSPSGRSLI 405
           ++  L        S +++ ++SP G+ L 
Sbjct: 214 EQLALTFSLEGHKSAVKSVSFSPDGQYLA 242



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 60/174 (34%), Gaps = 12/174 (6%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTN 299
           L       A + + +    + A   S +G+    S   D  ++++  +LQ+      L  
Sbjct: 43  LAGITTHMAMQTLKSHNKWVYAISISPDGETLA-SGSYDGKINLW--NLQTGKLRATLNA 99

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S + S D   +V  S      ++ +      +      + E        +P G 
Sbjct: 100 HEDAVSSLAISSDGQTLVSGS---WDNRIDLWNLQTGEHLHTLDEAEDDVSAIALTPDGK 156

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +A +        + +      +  R+     ++ +  +SP G++L  S  +DG
Sbjct: 157 YLAASAADK---NLRLWNLKTGELIRIQPTPEDVLSLAFSPDGQTLA-SGSRDG 206



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 7/148 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG     +    R+   + +        +    FSP+ Q +A  + D      V +
Sbjct: 197 QTLASGSRDGVIRFWQREQLALTFSLEGHKSAVKSVSFSPDGQYLASGSQDQ----SVKV 252

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                 +  K +      +L+  FS +G+    S   D ++ ++   L       L    
Sbjct: 253 WQRHQGKLLKILKGHTEPVLSVAFSPDGRSLA-SGSYDRSIKLWQ-PLSGKPLGNLIGHT 310

Query: 302 FINISASYSPDSSQIVFESDREGKEQLY 329
               S  +SPD  +++  S  +   +++
Sbjct: 311 KSVRSIQFSPDGKKLI-SSGSDATIKIW 337



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 75/198 (37%), Gaps = 22/198 (11%)

Query: 99  RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK--IAH 156
             + WN    +++   R+    +D L + F      D + +           W++  +A 
Sbjct: 166 NLRLWNLKTGELI---RIQPTPEDVLSLAFS----PDGQTLASGSRDGVIRFWQREQLAL 218

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           T S + ++S       F+    +++    SG    S+ V  R    +  +     + +  
Sbjct: 219 TFSLEGHKSAVK-SVSFSPDGQYLA----SGSQDQSVKVWQRHQGKLLKILKGHTEPVLS 273

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             FSP+ + +A  +YD      + L      +    +      + + +FS +GK+ + S 
Sbjct: 274 VAFSPDGRSLASGSYDR----SIKLWQPLSGKPLGNLIGHTKSVRSIQFSPDGKKLISSG 329

Query: 277 QKDEAMDIY---SVDLQS 291
             D  + I+   +++ + 
Sbjct: 330 S-DATIKIWSTITINAKG 346


>gi|317159430|ref|XP_003191069.1| NACHT and WD40 domain protein [Aspergillus oryzae RIB40]
          Length = 1104

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 68/189 (35%), Gaps = 14/189 (7%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                   + +    FSP+ + +A  + D+     + L DT      + +    S++ +  
Sbjct: 862  QTLEGHSRSVHSVAFSPDGRTLASGSDDN----TIKLWDTTTGTERQTLKGHSSLVYSVA 917

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G+    S   D  + ++  D  ++   + L     +  S ++SPD   +   SD  
Sbjct: 918  FSPDGRTLA-SGSDDNTIKLW--DTTTDTERQTLKGHSSLVYSVAFSPDGRTLASGSD-- 972

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                + +  +    + +  +   +S    V+S  G  +A          I +       E
Sbjct: 973  -DNTIKLWDTTTGTECQTLEGHSSSVESVVFSLDGRTLASGSHDNT---IKLWDTTTGTE 1028

Query: 384  RLLVEDSNL 392
            R  ++  + 
Sbjct: 1029 RQTLKGRSD 1037



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 72/217 (33%), Gaps = 17/217 (7%)

Query: 219  FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            F+P Q  V   +       I  + +++       + +      + +  FS +G+    S 
Sbjct: 828  FAPAQSIVKKTFLREVVRQIKSLPVLENTWSPILQTLEGHSRSVHSVAFSPDGRTLA-SG 886

Query: 277  QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D  + ++  D  +    + L     +  S ++SPD   +   SD      + +  +  
Sbjct: 887  SDDNTIKLW--DTTTGTERQTLKGHSSLVYSVAFSPDGRTLASGSD---DNTIKLWDTTT 941

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              +++  +   +  +   +SP G  +A          I +       E   +E  +    
Sbjct: 942  DTERQTLKGHSSLVYSVAFSPDGRTLASGSDDNT---IKLWDTTTGTECQTLEGHSSSVE 998

Query: 396  TWSP--SGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +      GR+L        D   KL+        +TL
Sbjct: 999  SVVFSLDGRTLASGSH---DNTIKLWDTTTGTERQTL 1032



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 67/180 (37%), Gaps = 11/180 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++ SG   N++ + D      R        +++   FSP+ + +A  + D+     + L
Sbjct: 881  RTLASGSDDNTIKLWDTTTGTERQTLKGHSSLVYSVAFSPDGRTLASGSDDN----TIKL 936

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
             DT  D   + +    S++ +  FS +G+    S   D  + ++  D  +    + L   
Sbjct: 937  WDTTTDTERQTLKGHSSLVYSVAFSPDGRTLA-SGSDDNTIKLW--DTTTGTECQTLEGH 993

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S  +S D   +   S       + +  +    +++  + +  S    +  P  +L
Sbjct: 994  SSSVESVVFSLDGRTLASGSH---DNTIKLWDTTTGTERQTLKGRSDSVETVLNEPNSNL 1050


>gi|218258341|ref|ZP_03474743.1| hypothetical protein PRABACTJOHN_00398 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225533|gb|EEC98183.1| hypothetical protein PRABACTJOHN_00398 [Parabacteroides johnsonii
           DSM 18315]
          Length = 484

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 95/290 (32%), Gaps = 50/290 (17%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKV 226
                   R++     + + +      +   D   I        + I        +  K+
Sbjct: 125 PVDPYIAYRLIDPGYQLWNEMGIYQRELASFDQEPILENRLMDNNCINCHSFCMQDPNKM 184

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------- 278
            +     +    V + D RI     +     S ++ P +  +GK    S           
Sbjct: 185 LF-HVRAKYGCTVLVDDDRIKTLDTKTDQTISALVYPSWHPSGKFVAFSTNNTTQDTHPV 243

Query: 279 ------DEAMDIYSVDLQSNA---TERLTNTLFINISASYSPDSSQIVFESD-------- 321
                 D+A D+   D++      T+ L +        ++SPD  Q+ F S         
Sbjct: 244 HRTEVYDKASDVVVYDVEKQEIITTQALFSKKRFETFPTFSPDGKQLYFCSAPALKVPGE 303

Query: 322 -REGKEQLYVMQSN------GSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            R+ +  L  +  +      GS    I Q   ++ S   P  SP G  +  T  S   F 
Sbjct: 304 LRDLRYSLCRISFDPESRTFGSVVDTIFQAETEQRSILFPRVSPDGKYLLCTTTSYGTFP 363

Query: 373 IGVMKKD------GSQERLLVEDSNLQAP------TWSPSGRSLIFSRKK 410
           I     D       +  ++  E++N  +P      +WS + + ++FS ++
Sbjct: 364 IWHKDADLCMFDLSTGTQVPTEEAN--SPDTDSYHSWSSNSKWVVFSSRR 411


>gi|114049297|ref|YP_739847.1| peptidase S9 prolyl oligopeptidase [Shewanella sp. MR-7]
 gi|113890739|gb|ABI44790.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sp. MR-7]
          Length = 681

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 66/177 (37%), Gaps = 14/177 (7%)

Query: 266 SSNGKRALISV-----QKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFE 319
           S + +    S      + D  +D++   +  +  + +T +    +++ ++SP+   + F 
Sbjct: 236 SPDERLIAFSAYGSDNRVDPKLDLFLATIGGSKADNITPDNPAPDLNPTFSPNGKTLAFT 295

Query: 320 SDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             +         +L ++  +      ++ D + S     W+P       +        I 
Sbjct: 296 RQKIPGFYADTARLMLLDVSSRKLTTLTADWDRSVSQFEWTPDSKGFYASIDDAATNRIY 355

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETL 430
            +     + + + + ++   P  +  G+ +     +     ++L SI+  NG+ E L
Sbjct: 356 HIDAKSGKAKAITQATDFSQPAIAKDGQLIA--TNQSFLYPARLVSINPRNGKTERL 410



 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 97/317 (30%), Gaps = 68/317 (21%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTR 245
                 L   D +G   R +T  +   + EP FSP+ + +A+ +  + +D  ++YL+   
Sbjct: 67  DKGSTQLWRFDGEGKKNRAITA-KGLKVSEPVFSPDGKTLAFISERNDDDAGQIYLLPMD 125

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALI------------------------------- 274
                 ++ +  + +   ++   GK                                   
Sbjct: 126 GPGEASKLTDIPTGVNGIKW--VGKHLYFISNIFPEQNWEQMKAQLKTDKDNKVSARQWN 183

Query: 275 ---------SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQI 316
                     + +     ++ +     A E +T  L   +             SPD   I
Sbjct: 184 ALPYSQFDHWLDERRQAHVFRIPATGGAVEAVTQPLGHEL-PRSSQSSSSYDISPDERLI 242

Query: 317 VFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            F +            L++    GS    I+ D  A   +P +SP G  +AFT+     F
Sbjct: 243 AFSAYGSDNRVDPKLDLFLATIGGSKADNITPDNPAPDLNPTFSPNGKTLAFTRQKIPGF 302

Query: 372 -----AIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + ++     +   L  D +       W+P  +   F    D    +++Y ID  
Sbjct: 303 YADTARLMLLDVSSRKLTTLTADWDRSVSQFEWTPDSKG--FYASIDDAATNRIYHIDAK 360

Query: 425 GRNETLINTPAYASDPQ 441
                 I      S P 
Sbjct: 361 SGKAKAITQATDFSQPA 377



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 96/295 (32%), Gaps = 70/295 (23%)

Query: 217 PRFSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  S   + +      Y   +D+   +++  D    +  + I      +  P FS +GK 
Sbjct: 46  PVVSSTGEHIIAPVTEYDLKEDKGSTQLWRFDGE-GKKNRAITAKGLKVSEPVFSPDGKT 104

Query: 272 ALISVQK--DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-------- 320
                ++  D+A  IY + +       +LT+         +      + F S        
Sbjct: 105 LAFISERNDDDAGQIYLLPMDGPGEASKLTDIPTGVNGIKWV--GKHLYFISNIFPEQNW 162

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQDKEA- 347
                                           D   +  ++ + + G   + ++Q     
Sbjct: 163 EQMKAQLKTDKDNKVSARQWNALPYSQFDHWLDERRQAHVFRIPATGGAVEAVTQPLGHE 222

Query: 348 ------SYFDPVWSPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLVED--SNLQA 394
                 S      SP   LIAF+ +  +        + +    GS+   +  D  +    
Sbjct: 223 LPRSSQSSSSYDISPDERLIAFSAYGSDNRVDPKLDLFLATIGGSKADNITPDNPAPDLN 282

Query: 395 PTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
           PT+SP+G++L F+R+K        ++L  +D++ R  T +        S  +W  
Sbjct: 283 PTFSPNGKTLAFTRQKIPGFYADTARLMLLDVSSRKLTTLTADWDRSVSQFEWTP 337



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 12/215 (5%)

Query: 174 NSRILFVSESVVSGII--KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           + R++  S       +  K  L +    G+    +TP        P FSPN + +A+   
Sbjct: 238 DERLIAFSAYGSDNRVDPKLDLFLATIGGSKADNITPDNPAPDLNPTFSPNGKTLAFTRQ 297

Query: 232 DDEDIL----RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                     R+ L+D    +      ++   +    ++ + K    S+       IY +
Sbjct: 298 KIPGFYADTARLMLLDVSSRKLTTLTADWDRSVSQFEWTPDSKGFYASIDDAATNRIYHI 357

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D +S   + +T         + + D   I          +L  +       +R+ Q  + 
Sbjct: 358 DAKSGKAKAITQATDF-SQPAIAKDGQLIATNQSFLYPARLVSINPRNGKTERLEQFNDE 416

Query: 348 SYFDPVWSPQGDL--IAFTKFSGEKFAIGVMKKDG 380
              D      G    + +  + G+   + V    G
Sbjct: 417 ILKDVDL---GTYESVTYKGYQGQDIQMWVHYPPG 448



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 67/247 (27%), Gaps = 64/247 (25%)

Query: 260 ILAPRFSSNGKRAL-----ISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +P  SS G+  +       +++D  +  ++  D +      +T          +SPD 
Sbjct: 43  IGSPVVSSTGEHIIAPVTEYDLKEDKGSTQLWRFDGEGKKNRAITAKGLKVSEPVFSPDG 102

Query: 314 SQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----- 366
             + F S+R  +   Q+Y++  +G  +     D         W   G  + F        
Sbjct: 103 KTLAFISERNDDDAGQIYLLPMDGPGEASKLTDIPTGVNGIKWV--GKHLYFISNIFPEQ 160

Query: 367 -----------------------------------SGEKFAIGVMKKDGSQERLLVEDSN 391
                                                 +  +  +   G     + +   
Sbjct: 161 NWEQMKAQLKTDKDNKVSARQWNALPYSQFDHWLDERRQAHVFRIPATGGAVEAVTQPLG 220

Query: 392 LQAPT---------WSPSGRSLIFS---RKKDGDTGSKLYSIDLNGRNE--TLINTPAYA 437
            + P           SP  R + FS        D    L+   + G        + PA  
Sbjct: 221 HELPRSSQSSSSYDISPDERLIAFSAYGSDNRVDPKLDLFLATIGGSKADNITPDNPAPD 280

Query: 438 SDPQWVG 444
            +P +  
Sbjct: 281 LNPTFSP 287


>gi|148658571|ref|YP_001278776.1| hypothetical protein RoseRS_4494 [Roseiflexus sp. RS-1]
 gi|148570681|gb|ABQ92826.1| hypothetical protein RoseRS_4494 [Roseiflexus sp. RS-1]
          Length = 472

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 106/270 (39%), Gaps = 39/270 (14%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRV------YLM 242
            L V+D D A++ +L      +     ++P+ + + +      +     +V      YL+
Sbjct: 196 ELWVIDLDDASLHHLANQAGYLAM---WTPDSRALVFGRLVALESPKNPQVPFRTELYLV 252

Query: 243 DTRIDRAPKRIGNFRSMILAP-RFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTN- 299
                     +G+  +  L P  +S +G++   + V      ++++VD        LT  
Sbjct: 253 TADGAEQRLLLGDETAYGLQPLGWSVDGQQFYYAIVTLQGQWELWTVDRTGG----LTQF 308

Query: 300 -----TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYF 350
                + ++  SAS SPD ++++ +    G+  L V++ +G +QK I    + D+  + +
Sbjct: 309 QASLPSQYLIQSASLSPDGTKVLLKVLDRGQYALIVLRVDGLEQKTIVSGATGDQPINQY 368

Query: 351 DPVWSPQGDLIAFTK---FSGEKFAIGVMKKDGSQERLLVED--SNLQAP---TWSPSGR 402
             +WSP    I F       G+   +  +     Q R++  +     +      WSP G+
Sbjct: 369 AAIWSPDDQSI-FAHIPPQPGQPAHLERIDLRTGQRRVIPTEPIGRDEFVIPQAWSPDGK 427

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            L+  +       S  Y +   G     I 
Sbjct: 428 WLVVLKYP--RLQSLAYLMQATGGPMAQIP 455



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 77/236 (32%), Gaps = 16/236 (6%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYAT 230
            F   +   S        +  L ++  DGA  R L         +P  +S + Q+  YA 
Sbjct: 228 VFGRLVALESPKNPQVPFRTELYLVTADGAEQRLLLGDETAYGLQPLGWSVDGQQFYYAI 287

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRALISVQKDEAMDIYSVD 288
              +    ++ +D R     +   +  S  L  +   S +G + L+ V       +  + 
Sbjct: 288 VTLQGQWELWTVD-RTGGLTQFQASLPSQYLIQSASLSPDGTKVLLKVLDRGQYALIVLR 346

Query: 289 LQSNATERLTNTLFIN-----ISASYSPDSSQ-IVFESDREGKE-QLYVMQSNGSDQKRI 341
           +     + + +    +      +A +SPD          + G+   L  +      ++ I
Sbjct: 347 VDGLEQKTIVSGATGDQPINQYAAIWSPDDQSIFAHIPPQPGQPAHLERIDLRTGQRRVI 406

Query: 342 SQDKEASY---FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNL 392
             +            WSP G  +   K+   +    +M+  G       L + SN 
Sbjct: 407 PTEPIGRDEFVIPQAWSPDGKWLVVLKYPRLQSLAYLMQATGGPMAQIPLTQPSNW 462



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/317 (13%), Positives = 98/317 (30%), Gaps = 43/317 (13%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT---PSRDQILFEPRFSPNQQ 224
              G     +  V         K ++ +       +R +      +     +   SP+  
Sbjct: 115 TPSGPLPPGLKVVYGETDGLSGKTTIWLASAANLTLRRVLATFDHKVGYGVQGAVSPDGN 174

Query: 225 KVA---YATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALISV- 276
           K+      +   E   R    +  +    D +   + N    +    ++ + +  +    
Sbjct: 175 KIVCLVIPSDAGERAARTTAGELWVIDLDDASLHHLANQAGYLAM--WTPDSRALVFGRL 232

Query: 277 ---------QKDEAMDIYSVDLQSNATERL-TNTLFINISAS-YSPDSSQIVFE-SDREG 324
                    Q     ++Y V         L  +     +    +S D  Q  +     +G
Sbjct: 233 VALESPKNPQVPFRTELYLVTADGAEQRLLLGDETAYGLQPLGWSVDGQQFYYAIVTLQG 292

Query: 325 KEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           + +L+ +   G   + + S   +        SP G  +        ++A+ V++ DG ++
Sbjct: 293 QWELWTVDRTGGLTQFQASLPSQYLIQSASLSPDGTKVLLKVLDRGQYALIVLRVDGLEQ 352

Query: 384 RLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT---- 433
           + +V  +    P       WSP  +S+           + L  IDL      +I T    
Sbjct: 353 KTIVSGATGDQPINQYAAIWSPDDQSIFAHIPPQPGQPAHLERIDLRTGQRRVIPTEPIG 412

Query: 434 -------PAYASDPQWV 443
                   A++ D +W+
Sbjct: 413 RDEFVIPQAWSPDGKWL 429


>gi|212545450|ref|XP_002152879.1| WD-repeat protein, putative [Penicillium marneffei ATCC 18224]
 gi|210065848|gb|EEA19942.1| WD-repeat protein, putative [Penicillium marneffei ATCC 18224]
          Length = 1545

 Score = 75.4 bits (184), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 83/241 (34%), Gaps = 29/241 (12%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-------DDEDILR 238
            S     ++ + D D   +++   S  + +    FSPN + +   +Y       D +    
Sbjct: 935  SSSYDGTIKLWDPDTGALKHTLESHKERVESIAFSPNGRLLVSGSYDGTIKLWDSDTGAL 994

Query: 239  VYLMDTRIDRAPKRIGNFRSMIL----------APRFSSNGKRALISVQKDEAMDIYSVD 288
             Y +D    R+   I N                +  FS +G+    S   D ++  +  D
Sbjct: 995  KYTVDDPHGRSFFEINNPNGATFVHHTGPPPISSVAFSPDGELLA-SGANDGSVKFW--D 1051

Query: 289  LQSNATERLTNTLFIN----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
              + A ER+  T         S  +SPD   +   S  +G  +L+   +   +       
Sbjct: 1052 PATGALERILQTKSRELHRVDSVCFSPDGRLLAAGSS-DGTIKLWDPVTGVLNHTMWDYS 1110

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             + + F   +SP   L+A     G     G+        + ++  S   +  ++P G  L
Sbjct: 1111 NKGAVFRMAFSPDARLLASCHIDGSN---GLWDPVTGALKNILGLSGH-SVCFAPDGGLL 1166

Query: 405  I 405
             
Sbjct: 1167 A 1167



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 74/229 (32%), Gaps = 37/229 (16%)

Query: 219  FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            F+P    +  A+ +     +      D       + +      +++  FS NG+    S 
Sbjct: 878  FAPRDSIIRQAFESDRPSWMHYWPNQDEGWGPDLQTLEGHSGSVVSVAFSPNGRLIA-SS 936

Query: 277  QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFES--------------- 320
              D  + ++  D  + A +  L +      S ++SP+   +V  S               
Sbjct: 937  SYDGTIKLW--DPDTGALKHTLESHKERVESIAFSPNGRLLVSGSYDGTIKLWDSDTGAL 994

Query: 321  -----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                 D  G+    +   NG     +            +SP G+L+A     G       
Sbjct: 995  KYTVDDPHGRSFFEINNPNG--ATFVHHTGPPPISSVAFSPDGELLASGANDGSVK--FW 1050

Query: 376  MKKDGSQERLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                G+ ER+L   S     + +  +SP GR L        D   KL+ 
Sbjct: 1051 DPATGALERILQTKSRELHRVDSVCFSPDGRLLAAGSS---DGTIKLWD 1096



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 100/301 (33%), Gaps = 39/301 (12%)

Query: 130  LWDVKDR--KQIIGKKF----FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            LWD      K I+G       F+       I + IS +++   T         + ++  S
Sbjct: 1138 LWDPVTGALKNILGLSGHSVCFAPDGGLLAIGYDISIELWDPFTCTLKYILEPLSYLVLS 1197

Query: 184  VV--------SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            V         +    NS+ + D D      +  +   +++   FSP+ Q +A  + D   
Sbjct: 1198 VAFSPDSRLLASADGNSIKLWDLDMGAPEPILNAHADMVYSVAFSPDGQLLASCSRDR-- 1255

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSN 292
               + L +T        +      +       FS +  R L S   +  + ++  D  + 
Sbjct: 1256 --TIKLWETSTGALKHTLNALEGQLEWSTLVIFSHD-NRLLASGVSEGTVRLW--DPATG 1310

Query: 293  ATERLTNTLFIN-------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
              +        +        S ++SP+   +   ++      + +        K   +  
Sbjct: 1311 ILKHTLKGPSADLRMRSSVTSLAFSPNGQMLAAGTN---NHIIDIWDLTTGTVKHSLELH 1367

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSL 404
              +     +SP   L+A     G ++ I +        +  V E+  LQ+  + P  + L
Sbjct: 1368 VRAVGSITFSPNSQLLAI----GSRYEINLWDMATGTLKHTVEENRALQSIAFLPDSKLL 1423

Query: 405  I 405
            +
Sbjct: 1424 V 1424



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 85/242 (35%), Gaps = 30/242 (12%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            S+ + D     ++Y+      ++    FSP+ + +A A     D   + L D  +     
Sbjct: 1173 SIELWDPFTCTLKYILEPLSYLVLSVAFSPDSRLLASA-----DGNSIKLWDLDMGAPEP 1227

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--- 308
             +     M+ +  FS +G+    S  +D  + ++     + A +   N L   +  S   
Sbjct: 1228 ILNAHADMVYSVAFSPDGQLLA-SCSRDRTIKLWE--TSTGALKHTLNALEGQLEWSTLV 1284

Query: 309  -YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA------SYFDPVWSPQGDLI 361
             +S D+  +      EG  +L+         K   +   A      S     +SP G ++
Sbjct: 1285 IFSHDNRLLA-SGVSEGTVRLW--DPATGILKHTLKGPSADLRMRSSVTSLAFSPNGQML 1341

Query: 362  AFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            A          I +        +  L +    + + T+SP+ + L    + +      L+
Sbjct: 1342 A---AGTNNHIIDIWDLTTGTVKHSLELHVRAVGSITFSPNSQLLAIGSRYE----INLW 1394

Query: 420  SI 421
             +
Sbjct: 1395 DM 1396


>gi|159898671|ref|YP_001544918.1| hypothetical protein Haur_2150 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159891710|gb|ABX04790.1| hypothetical protein Haur_2150 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 344

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 93/255 (36%), Gaps = 23/255 (9%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAY-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           + L    + +L +    P   ++ Y     A  DDE         +     P+ +   ++
Sbjct: 99  QILVDDPEAVLSQATCHPTNDQLLYLRSPLALIDDEPAPPSIWQISANLSQPQSLDVDQT 158

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV- 317
             L  ++S +G   +  +   +   +   D+ +  T  LT T       ++ PDS  ++ 
Sbjct: 159 PALNQQWSPDGNWLIYELA--DRPQLVLQDV-TGVTRELTLTGTF----TWQPDSQALII 211

Query: 318 --FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFA 372
                   G+  +L            + +  +A  + P  +P G  +A+ +     E   
Sbjct: 212 AQLTEPETGRFGRLVRYDLATEQLNVVLESVDADVYYPRLAPDGQQLAYIRRPLGAELGE 271

Query: 373 IGVMKKDGS-QERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           + ++K + S Q   L  D   +   P WSP  + L++SR     +   ++  +    N +
Sbjct: 272 VWLLKLNNSIQPIQLTNDPQYDNFDPQWSPDSQQLVWSRLDPQQSRYSIWQQNPETGNTS 331

Query: 430 LINTPAYASDPQWVG 444
                  A  P+W+ 
Sbjct: 332 QFAD--DAIWPRWLP 344



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 83/218 (38%), Gaps = 22/218 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           S+  +  + +  + L   +   L + ++SP+   + Y   D   +  V    T + R   
Sbjct: 139 SIWQISANLSQPQSLDVDQTPALNQ-QWSPDGNWLIYELADRPQL--VLQDVTGVTRELT 195

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINIS- 306
             G F        +  + +  +I+     +      +   DL +     +  ++  ++  
Sbjct: 196 LTGTF-------TWQPDSQALIIAQLTEPETGRFGRLVRYDLATEQLNVVLESVDADVYY 248

Query: 307 ASYSPDSSQIVFESDREGKE--QLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAF 363
              +PD  Q+ +     G E  ++++++ N S    +++ D +   FDP WSP    + +
Sbjct: 249 PRLAPDGQQLAYIRRPLGAELGEVWLLKLNNSIQPIQLTNDPQYDNFDPQWSPDSQQLVW 308

Query: 364 TKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           ++      +++I     +        +D+    P W P
Sbjct: 309 SRLDPQQSRYSIWQQNPETGNTSQFADDA--IWPRWLP 344



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/157 (11%), Positives = 53/157 (33%), Gaps = 9/157 (5%)

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           +TG    +   +  +  +L + +  +     ++  +      +  ++  D+Y       G
Sbjct: 196 LTGTFTWQPDSQALIIAQLTEPETGRFGRLVRYDLATEQLNVVLESVDADVYYPRLAPDG 255

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
               ++ ++      G     + ++  + +     LT       F+P++SP+ Q++ ++ 
Sbjct: 256 ---QQLAYI--RRPLGAELGEVWLLKLNNSIQPIQLTNDPQYDNFDPQWSPDSQQLVWSR 310

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            D +                     F    + PR+  
Sbjct: 311 LDPQQSRYSIWQQNPETGNT---SQFADDAIWPRWLP 344


>gi|271966022|ref|YP_003340218.1| hypothetical protein Sros_4614 [Streptosporangium roseum DSM 43021]
 gi|270509197|gb|ACZ87475.1| WD40 repeat-domain-containing protein-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 919

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 66/328 (20%), Positives = 110/328 (33%), Gaps = 50/328 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR +  G     V  RLWDV  ++ I G  F SS      +A   S D   ++    GD 
Sbjct: 349 GRTLATGSRDRTV--RLWDVATQRPI-GDAFTSSADEVNAVA--FSPD-GHTLATSGGDN 402

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             R+  V+     G                          +    FSP+ + +A      
Sbjct: 403 MIRLWDVASRRPIGKP-----------------LTGHTAEVNAVVFSPDGRTLA----TG 441

Query: 234 EDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            D   + L D    R   K +      + +  FS +G+    S        I   D  S 
Sbjct: 442 GDDNMIRLWDAASRRPIGKPLTGHTKKVTSVAFSPDGRTLATS---GGDNMIRLWDAASR 498

Query: 293 AT--ERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASY 349
               + LT      +S ++S D   +   S DR    +L+ + +  S  + +    +A  
Sbjct: 499 RPIGKLLTGHTAGVLSVAFSADGRTLASGSLDRS--IRLWDVATRSSIGEPLVGHTDA-V 555

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIF 406
           +   +S     +A    +G   ++ +        + E L      + A  +SP GR+L  
Sbjct: 556 YAVAFSADNRTVA---SAGSDTSVRLWDASAHRPAGEPLTGHTDAVYAVAFSPDGRTLA- 611

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTP 434
                GD   +L+    +G     I  P
Sbjct: 612 --TGGGDKTVRLW----DGATRRPIGKP 633



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 59/345 (17%), Positives = 115/345 (33%), Gaps = 37/345 (10%)

Query: 117 IKEGKDRLRVEFRLWDVKD----RKQIIGKK---FFSS-PASWRKIAHTISDDIY----- 163
                  L    RLWDV       + ++G     +  +  A  R +A   SD        
Sbjct: 522 RTLASGSLDRSIRLWDVATRSSIGEPLVGHTDAVYAVAFSADNRTVASAGSDTSVRLWDA 581

Query: 164 --QSITGEKGDFNSRILFVSESVVSGIIKNSL----CVMDRDGANIRYL---TPSRDQIL 214
                 GE    ++  ++       G    +      V   DGA  R +          +
Sbjct: 582 SAHRPAGEPLTGHTDAVYAVAFSPDGRTLATGGGDKTVRLWDGATRRPIGKPLTGHTDAV 641

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               FSP+ + +A       D   V L +    R      N   + L+  FS +G+    
Sbjct: 642 ESVAFSPDGRTLA----SGGDDHTVRLWEVATRRPIGEPMNGP-LALSVDFSPDGRTLA- 695

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S   D  + ++ V  +    E L        + ++SPD   +   S  +   +L+ + + 
Sbjct: 696 SGGGDHTVRLWEVATRRPIGEPLIGHTAEVNAVAFSPDGRILA-TSGADYTVRLWDVATR 754

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNL 392
               + ++   E + +   +SP G ++A          + +   +  G+   +      +
Sbjct: 755 RPIGEPLTGHTE-TVWSVAFSPDGHIVASAAGDNTVRLWDVTTRRPIGNPMSVF--SVWV 811

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            +  +SP GR L  +   D     +L+ +        ++N PA  
Sbjct: 812 GSVAFSPDGRMLASASSTD---AVQLWDVATRRPIGEVLNGPADV 853



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 83/222 (37%), Gaps = 19/222 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       +    FSP+ + +A  T  ++  +R++ + TR       IG+   + +  
Sbjct: 287 RAVLNGHTDYVLAVAFSPDGRTLA--TGGNDKTIRLWEVATRRPIGEPLIGHTAEVNV-V 343

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G+    +  +D  + ++ V  Q    +  T++     + ++SPD   +       
Sbjct: 344 AFSPDGRTLA-TGSRDRTVRLWDVATQRPIGDAFTSSADEVNAVAFSPDGHTLA---TSG 399

Query: 324 GKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           G   + +          K ++    A     V+SP G  +A     G+   I +      
Sbjct: 400 GDNMIRLWDVASRRPIGKPLT-GHTAEVNAVVFSPDGRTLA---TGGDDNMIRLWDAASR 455

Query: 382 QER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +     L      + +  +SP GR+L       GD   +L+ 
Sbjct: 456 RPIGKPLTGHTKKVTSVAFSPDGRTLA---TSGGDNMIRLWD 494



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 59/339 (17%), Positives = 116/339 (34%), Gaps = 45/339 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR +  G     V  RLWD   R+ I GK       +   +A   S D  +++     D 
Sbjct: 607 GRTLATGGGDKTV--RLWDGATRRPI-GKPLTGHTDAVESVA--FSPD-GRTLASGGDDH 660

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             R+  V+     G                    P    +     FSP+ + +A  +   
Sbjct: 661 TVRLWEVATRRPIGE-------------------PMNGPLALSVDFSPDGRTLA--SGGG 699

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +  +R++ + TR       IG+   +  A  FS +G R L +   D  + ++  D+ +  
Sbjct: 700 DHTVRLWEVATRRPIGEPLIGHTAEVN-AVAFSPDG-RILATSGADYTVRLW--DVATRR 755

Query: 294 T--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYF 350
              E LT       S ++SPD   +       G   + +                     
Sbjct: 756 PIGEPLTGHTETVWSVAFSPDGHIVA---SAAGDNTVRLWDVTTRRPIGNPMSVFSVWVG 812

Query: 351 DPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
              +SP G ++A    +   + + +   +  G       +   + +  +SP GR L    
Sbjct: 813 SVAFSPDGRMLASASSTDAVQLWDVATRRPIGEVLNGPAD--VVGSVAFSPDGRMLA--- 867

Query: 409 KKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVGFM 446
             + D  ++++ +   +   +TL +        +W  ++
Sbjct: 868 SANWDNTARIWDLTAFSNPFKTLCDAGGSLPSAEWNRYL 906



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 68/195 (34%), Gaps = 14/195 (7%)

Query: 219 FSPN---QQKVAYATYD--DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +S +    +++A   Y     D  R  ++          +      +LA  FS +G+   
Sbjct: 251 WSADPLTARRLALTAYRLAPTDDARYSMLAAMTLSGRAVLNGHTDYVLAVAFSPDGRTLA 310

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +   D+ + ++ V  +    E L          ++SPD   +     R+   +L+ + +
Sbjct: 311 -TGGNDKTIRLWEVATRRPIGEPLIGHTAEVNVVAFSPDGRTLA-TGSRDRTVRLWDVAT 368

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDS 390
                   +   +       +SP G  +A    SG    I +      +     L    +
Sbjct: 369 QRPIGDAFTSSAD-EVNAVAFSPDGHTLA---TSGGDNMIRLWDVASRRPIGKPLTGHTA 424

Query: 391 NLQAPTWSPSGRSLI 405
            + A  +SP GR+L 
Sbjct: 425 EVNAVVFSPDGRTLA 439


>gi|119488473|ref|ZP_01621646.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
 gi|119455284|gb|EAW36424.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
          Length = 1636

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/222 (19%), Positives = 91/222 (40%), Gaps = 20/222 (9%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VS    +++ + + +G    +     D+ ++ P FSP+ + +A  +  ++ IL       
Sbjct: 1277 VSASRDSTVRLWNLNGIPQVFQ---PDKKVYSPIFSPDGEIIASVSAKNQVILWKVHRKI 1333

Query: 245  RIDRAPKRIGN-----FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            +     K          R ++    FS NGK    S  +D+ + ++  +LQ    + L  
Sbjct: 1334 KQQLPYKLSTQLSFSAHRDIVNNISFSPNGKLIA-SASQDQTVKLW--NLQGEVIKNLP- 1389

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                  +  +SPD + I   S+    +Q+  +  N  +  ++ Q  +    D  +S    
Sbjct: 1390 HNAPVWTVKFSPDGTLIATASE----DQIVRLWDNRGNLLQMLQGHQKQINDLSFSSDSQ 1445

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPS 400
            LIA          I +  +DG + + L+ + N   + ++SPS
Sbjct: 1446 LIASASDDNT---IILWNRDGKRLQTLIGNGNKFSSVSFSPS 1484



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 117/287 (40%), Gaps = 30/287 (10%)

Query: 165  SITGEKGDFNSRILFVSES-----VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
             +  E    ++ IL+V+ S     + S  +  ++ +  R+G  I+ +    + ++    F
Sbjct: 1047 QLIKEIEGHDAAILYVTFSPNSQIIASASLDKTIKLWTREGTIIQTI-RGHEDVVQWVNF 1105

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+ Q +A A+ D  + ++++ +D         +   +S + +  FS +GK  ++S  ++
Sbjct: 1106 SPDGQTIASASRD--NTVKLWRLD---GTLITTLKEHKSPVSSVIFSPDGK-LIVSADEN 1159

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +  +  + Q    +          S ++SPDS  I   S     +Q   +        
Sbjct: 1160 GTLIFW--NRQGQLLKTFKAHEGKIWSIAFSPDSQTIASAS----ADQKVKLWGRQGQLL 1213

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
               ++ +   +   +SP    I     +G+   I   ++   +  +      +   +++P
Sbjct: 1214 NSLEEHKHPVYSISYSPDSQCIVTADINGK--IIFWSREGILKTTIRGHRDAVNQVSFTP 1271

Query: 400  SGRSLIFSRKKDGDTGSKLYSIDLNGRNE-----TLINTPAYASDPQ 441
              + L+ + +   D+  +L+  +LNG  +       + +P ++ D +
Sbjct: 1272 DNQMLVSASR---DSTVRLW--NLNGIPQVFQPDKKVYSPIFSPDGE 1313



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 91/240 (37%), Gaps = 26/240 (10%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S+++ S      + +  R G  +  L   +  + +   +SP+ Q +  A  + + I    
Sbjct: 1191 SQTIASASADQKVKLWGRQGQLLNSLEEHKHPV-YSISYSPDSQCIVTADINGKIIFW-- 1247

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
               +R       I   R  +    F+ +  + L+S  +D  + +++++       ++   
Sbjct: 1248 ---SREGILKTTIRGHRDAVNQVSFTPD-NQMLVSASRDSTVRLWNLN----GIPQVFQP 1299

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDKEASY----FD 351
                 S  +SPD   I   S    K Q+ + + +   ++++     +Q   +++     +
Sbjct: 1300 DKKVYSPIFSPDGEIIASVS---AKNQVILWKVHRKIKQQLPYKLSTQLSFSAHRDIVNN 1356

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +SP G LIA          + +    G   + L  ++ +    +SP G  +  + +  
Sbjct: 1357 ISFSPNGKLIASASQDQT---VKLWNLQGEVIKNLPHNAPVWTVKFSPDGTLIATASEDQ 1413



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 61/153 (39%), Gaps = 9/153 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP---NQQKVAYATYDDE-DILRVYL 241
            S    N++ + +RDG  ++ L  + ++      FSP   ++Q +  A  D   D  +   
Sbjct: 1449 SASDDNTIILWNRDGKRLQTLIGNGNKFSSV-SFSPSRGDEQLIVAAMADRSLDFWKGQN 1507

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
               +       +G     I    FS NG+    S   D  + ++  D   N    L    
Sbjct: 1508 TTWKRLNTRTAVGGHTGEIYEVSFSPNGEIIA-SASSDGTVKLW--DRYGNLISTLRVGS 1564

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               +S S+SPD+  +V   D++ +   + + ++
Sbjct: 1565 APILSVSFSPDAQTLVAT-DQQNRVVFWKLDTS 1596


>gi|315042694|ref|XP_003170723.1| vegetative incompatibility protein HET-E-1 [Arthroderma gypseum CBS
            118893]
 gi|311344512|gb|EFR03715.1| vegetative incompatibility protein HET-E-1 [Arthroderma gypseum CBS
            118893]
          Length = 1471

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 92/249 (36%), Gaps = 20/249 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ V D       Y   +    +    FSP+ Q +A  + D     R+  +   
Sbjct: 1098 SGSHGGNVKVWDPTTGQELYSLRNHKDWVTSVAFSPDSQLLASGSKD-----RMIKLLNP 1152

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNATERLTNTLFI 303
               A  R+      + +  FS + +  L S   D A+ ++  SVD+         +   +
Sbjct: 1153 TTGAELRVIRVLDSVGSVAFSPDSQLLLASGSCDGAVKLWDPSVDIDLQIPTE--SQSGL 1210

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              S ++SPD   ++  S R+GK +++        + +  +   A      + P  D I  
Sbjct: 1211 VTSIAFSPDGQGLISGS-RDGKVKIW--DPTTGAELQTLKGHRAWVGSMGFLPD-DRILA 1266

Query: 364  TKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +   G+   +         E++L    + +    +SP GR  +F+   D D   KL+   
Sbjct: 1267 SGSDGKTVRLW--DPMTGAEQILEGHLAWVICMAFSPDGR--LFASGSD-DGIIKLWD-P 1320

Query: 423  LNGRNETLI 431
              G     +
Sbjct: 1321 ATGTELRTL 1329



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 62/359 (17%), Positives = 119/359 (33%), Gaps = 44/359 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIG--------KKFFSSPASWRKIAHTISDDIYQS 165
            GR +  G D   V  +LWD     ++          +    SP     ++ + +D   + 
Sbjct: 919  GRFLASGADDGTV--KLWDSATGAELQTLEGHSSTIQSVTFSPNGQLLVSGS-ADKTIKV 975

Query: 166  ITGEKG----------DFNSRILFVSESVV----SGIIKNSLCVMDRDGANIRYLTPSRD 211
                 G          D+ + + F  +S      S      + + D        +     
Sbjct: 976  WDSNSGAELQTLEGHLDWITSVAFSLDSQQLLLASSSFDRIIKLWDPMIGTELQILKGHL 1035

Query: 212  QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              +    FSP  Q++  A+    D   V L D       + +      + +  FS + +R
Sbjct: 1036 GPVRAIAFSPMSQQLLLAS--GSDDRTVKLWDPTTGVVLQTLQGHIGQVSSVAFSRDSQR 1093

Query: 272  -ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLY 329
              L S      + ++           L N      S ++SPDS  +   S DR     + 
Sbjct: 1094 PLLASGSHGGNVKVWD-PTTGQELYSLRNHKDWVTSVAFSPDSQLLASGSKDR----MIK 1148

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE- 388
            ++      + R+ +  + S     +SP   L+  +        +     D    ++  E 
Sbjct: 1149 LLNPTTGAELRVIRVLD-SVGSVAFSPDSQLLLASGSCDGAVKLWDPSVDI-DLQIPTES 1206

Query: 389  -DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                + +  +SP G+ LI S  +DG    K++        +TL    A+      +GF+
Sbjct: 1207 QSGLVTSIAFSPDGQGLI-SGSRDGKV--KIWDPTTGAELQTLKGHRAWVGS---MGFL 1259



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 77/223 (34%), Gaps = 18/223 (8%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                 +    FSP+ + +A       D   V L D+      + +    S I +  FS N
Sbjct: 905  GHKGWVNSVAFSPDGRFLA----SGADDGTVKLWDSATGAELQTLEGHSSTIQSVTFSPN 960

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            G + L+S   D+ + ++  +      + L   L    S ++S DS Q++  S       +
Sbjct: 961  G-QLLVSGSADKTIKVWDSN-SGAELQTLEGHLDWITSVAFSLDSQQLLLASSSF-DRII 1017

Query: 329  YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             +       + +I +          +SP    +     S ++  + +           ++
Sbjct: 1018 KLWDPMIGTELQILKGHLGPVRAIAFSPMSQQLLLASGSDDR-TVKLWDPTTGVVLQTLQ 1076

Query: 389  D--SNLQAPTWSPSGRSLIFSRKKDG--------DTGSKLYSI 421
                 + +  +S   +  + +    G         TG +LYS+
Sbjct: 1077 GHIGQVSSVAFSRDSQRPLLASGSHGGNVKVWDPTTGQELYSL 1119



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 83/244 (34%), Gaps = 16/244 (6%)

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
            +++  T S+  ++    FSP+ Q +   + D +    V + D       + +   R+ + 
Sbjct: 1199 DLQIPTESQSGLVTSIAFSPDGQGLISGSRDGK----VKIWDPTTGAELQTLKGHRAWVG 1254

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            +  F  +  R L S    + + ++  D  + A + L   L   I  ++SPD       SD
Sbjct: 1255 SMGFLPD-DRILASGSDGKTVRLW--DPMTGAEQILEGHLAWVICMAFSPDGRLFASGSD 1311

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                  + +       + R  +          +S    L A     G    +      G+
Sbjct: 1312 ---DGIIKLWDPATGTELRTLEGHVDGVTLVAFSLGSRLFASASRDGTV-KLW-NPITGA 1366

Query: 382  QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDP 440
            + + L         ++S     L   R   G    + +  D  +G  ET    P    + 
Sbjct: 1367 ELQTLTVKELPIELSFSNRSPHL---RTNLGSLDIQHWHCDGASGSLETSSKVPIPTQED 1423

Query: 441  QWVG 444
            QWV 
Sbjct: 1424 QWVC 1427



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 65/186 (34%), Gaps = 7/186 (3%)

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            + RV  +D       +     +  + +  FS +G+    S   D  + ++         +
Sbjct: 886  VWRVANVDKSWSAELETREGHKGWVNSVAFSPDGRFLA-SGADDGTVKLWD-SATGAELQ 943

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             L        S ++SP+   +V  S     + + V  SN   + +  +          +S
Sbjct: 944  TLEGHSSTIQSVTFSPNGQLLVSGS---ADKTIKVWDSNSGAELQTLEGHLDWITSVAFS 1000

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                 +     S ++         G++ ++L      ++A  +SP  + L+ +   D D 
Sbjct: 1001 LDSQQLLLASSSFDRIIKLWDPMIGTELQILKGHLGPVRAIAFSPMSQQLLLASGSD-DR 1059

Query: 415  GSKLYS 420
              KL+ 
Sbjct: 1060 TVKLWD 1065


>gi|119490215|ref|ZP_01622728.1| WD-repeat protein [Lyngbya sp. PCC 8106]
 gi|119454101|gb|EAW35254.1| WD-repeat protein [Lyngbya sp. PCC 8106]
          Length = 897

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 55/379 (14%), Positives = 115/379 (30%), Gaps = 93/379 (24%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G ++    D   V+F  WDV+  K                             T     +
Sbjct: 461 GEILATASDGNTVKF--WDVETGK----------------------------CTKILAGY 490

Query: 174 NSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             R+  V+ S       +G    ++ + +               +++   FSP+ Q +  
Sbjct: 491 QERVWAVAFSPDGQKFATGSNDQTIKIWNFSTGECVKTLQEHRHLVWWVGFSPDGQTLIS 550

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D      V        +  K +  + + +    F+ +GK  L+S  +D  + ++++ 
Sbjct: 551 VSQDQ----SVKFWQVASGQCLKTLDAYSNWVSFVTFNPDGK-LLVSCSEDGLVRLWNIH 605

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESD--------------------------- 321
            ++   + LT    I  SA++ P    +   SD                           
Sbjct: 606 TKT-CEKTLTGHTNIVSSAAFHPQGKLLATASDDSTIKLWNVTTGECLKTLWGHESWVHS 664

Query: 322 -----------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
                          + + +      +  +             +SP G ++A +    + 
Sbjct: 665 ASFSCQGLLATGSRDKTIKIWDIETGECLQTLAGHLHRVKSVAFSPCGQILA-SGSDDQT 723

Query: 371 FAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSI-------D 422
             I  +K  G   + L E ++      +SP G+ L       GD   KL+ I        
Sbjct: 724 LKIWDIK-QGICLQTLSEHTDWVLGVAFSPDGKMLA---SAGGDRTVKLWEIQTGNCVQT 779

Query: 423 LNGRNETLINTPAYASDPQ 441
           L G  + + +   ++ D  
Sbjct: 780 LRGHRQRVRSV-GFSYDGS 797



 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/335 (15%), Positives = 116/335 (34%), Gaps = 46/335 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRK--QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           G++I  G +   V  RLWDV+  K  Q++   +       R +A                
Sbjct: 377 GKMIASGSNDKTV--RLWDVETGKCLQVLKGHYR------RILA---------------I 413

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F+ +   V           ++   +        +  ++   +      P  + +A A+ 
Sbjct: 414 VFHLKYGLVISCGED----ETVRFWNITTGKCVRVLKTQVNWMSSIALHPEGEILATAS- 468

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              D   V   D    +  K +  ++  + A  FS +G++   +   D+ + I+  +  +
Sbjct: 469 ---DGNTVKFWDVETGKCTKILAGYQERVWAVAFSPDGQKFA-TGSNDQTIKIW--NFST 522

Query: 292 NA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
               + L     +     +SPD   ++  S     +Q        S Q   + D  +++ 
Sbjct: 523 GECVKTLQEHRHLVWWVGFSPDGQTLISVSQ----DQSVKFWQVASGQCLKTLDAYSNWV 578

Query: 351 DPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             V ++P G L+      G    +  +     ++ L    + + +  + P G+ L  +  
Sbjct: 579 SFVTFNPDGKLLVSCSEDG-LVRLWNIHTKTCEKTLTGHTNIVSSAAFHPQGKLLATASD 637

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              D+  KL+++      +TL    ++     +  
Sbjct: 638 ---DSTIKLWNVTTGECLKTLWGHESWVHSASFSC 669



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 50/291 (17%), Positives = 96/291 (32%), Gaps = 36/291 (12%)

Query: 116 VIKEGKDRLRVEF------RLWDVKDR---KQIIGKKFFSSPASWR---KIAHTISDDI- 162
           V      +L V        RLW++  +   K + G     S A++    K+  T SDD  
Sbjct: 581 VTFNPDGKLLVSCSEDGLVRLWNIHTKTCEKTLTGHTNIVSSAAFHPQGKLLATASDDST 640

Query: 163 -----------YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
                       +++ G +   +S        + +G    ++ + D +            
Sbjct: 641 IKLWNVTTGECLKTLWGHESWVHSASFSCQGLLATGSRDKTIKIWDIETGECLQTLAGHL 700

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +    FSP  Q +A  + D      + + D +     + +      +L   FS +GK 
Sbjct: 701 HRVKSVAFSPCGQILASGSDDQ----TLKIWDIKQGICLQTLSEHTDWVLGVAFSPDGKM 756

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S   D  + ++ +    N  + L        S  +S D S++V  SD      + V 
Sbjct: 757 LA-SAGGDRTVKLWEIQ-TGNCVQTLRGHRQRVRSVGFSYDGSKVVSSSD---DHTVKVW 811

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                D          + +    SP+G + A     G+   I + +    +
Sbjct: 812 NLTTGDCVYTCHGHSQTVWSVACSPEGQIFA---SGGDDQTIKLWEMTTGE 859



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/301 (12%), Positives = 86/301 (28%), Gaps = 58/301 (19%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           +  ++  + +D      T   G   S  L  +  +++  I   +            + P 
Sbjct: 262 NLHRVNFSHADLNQCVFTQTVGGVLSISLSPNGELLATGIDEDIVFWQTKAGRSLSILPG 321

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    FSP+   +A  + D      V L D +  +  K +   +S + +  FS +G
Sbjct: 322 HKAWVMAVSFSPDSNILASGSNDQ----TVRLWDVKTGQCLKTLRGHKSRVQSLTFSQDG 377

Query: 270 KRALISVQKDEAMDIYSVDLQSNA----------------------------------TE 295
           K    S   D+ + ++  D+++                                      
Sbjct: 378 KMIA-SGSNDKTVRLW--DVETGKCLQVLKGHYRRILAIVFHLKYGLVISCGEDETVRFW 434

Query: 296 RLTNTLFIN---ISASYS------PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            +T    +       ++       P+   +   SD      +           +I    +
Sbjct: 435 NITTGKCVRVLKTQVNWMSSIALHPEGEILATASD---GNTVKFWDVETGKCTKILAGYQ 491

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
              +   +SP G   A          I +      +    +      +    +SP G++L
Sbjct: 492 ERVWAVAFSPDGQKFATGSNDQT---IKIWNFSTGECVKTLQEHRHLVWWVGFSPDGQTL 548

Query: 405 I 405
           I
Sbjct: 549 I 549


>gi|170076987|ref|YP_001733625.1| hypothetical protein SYNPCC7002_A0359 [Synechococcus sp. PCC 7002]
 gi|169884656|gb|ACA98369.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
          Length = 173

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 13/139 (9%)

Query: 252 RIGNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----- 305
           R  N R++   P  +       + +  ++ + DIY  D  +  T  L     +N      
Sbjct: 38  RSLNSRALEFDPAIAEP---YLVFASDRNGSQDIYLFDTSTRQTILL---PGLNTLNEIA 91

Query: 306 -SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              + S D   IVF  +R G+  +Y+       ++ ++ +      +P  S  G  IAF 
Sbjct: 92  SHPAVSEDGRYIVFAVNRRGESDIYLYDREFEQKRNLTDNLNQEVRNPTISADGSKIAFE 151

Query: 365 KFSGEKFAIGVMKKDGSQE 383
                ++ I V  ++G Q 
Sbjct: 152 AAENGQWDILVYDRNGRQL 170



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 56/144 (38%), Gaps = 12/144 (8%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           VD    +     N+  +    + +     +VF SDR G + +Y+  ++      +     
Sbjct: 33  VDPGGRSL----NSRALEFDPAIAE--PYLVFASDRNGSQDIYLFDTSTRQTILLPGLNT 86

Query: 347 AS--YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGR 402
            +     P  S  G  I F      +  I +  ++  Q+R L ++ N +   PT S  G 
Sbjct: 87  LNEIASHPAVSEDGRYIVFAVNRRGESDIYLYDREFEQKRNLTDNLNQEVRNPTISADGS 146

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR 426
            + F   ++G     +Y  D NGR
Sbjct: 147 KIAFEAAENGQWDILVY--DRNGR 168



 Score = 65.8 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 11/154 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G  +     +D  G ++       D  + EP        + +A+ D      +YL DT  
Sbjct: 24  GYPRIVNFPVDPGGRSLNSRALEFDPAIAEP-------YLVFAS-DRNGSQDIYLFDTST 75

Query: 247 DRAPKRIG--NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +     G      +   P  S +G+  + +V +    DIY  D +      LT+ L   
Sbjct: 76  RQTILLPGLNTLNEIASHPAVSEDGRYIVFAVNRRGESDIYLYDREFEQKRNLTDNLNQE 135

Query: 305 I-SASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           + + + S D S+I FE+   G+  + V   NG  
Sbjct: 136 VRNPTISADGSKIAFEAAENGQWDILVYDRNGRQ 169



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 12/152 (7%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRIL---FVSESVVSGIIKNSLCVMDRDGANIRYL 206
            + +I +   D   +S+     +F+  I     V  S  +G     L     D +  + +
Sbjct: 24  GYPRIVNFPVDPGGRSLNSRALEFDPAIAEPYLVFASDRNGSQDIYLF----DTSTRQTI 79

Query: 207 T----PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                 + ++I   P  S + + + +A  +      +YL D   ++      N    +  
Sbjct: 80  LLPGLNTLNEIASHPAVSEDGRYIVFA-VNRRGESDIYLYDREFEQKRNLTDNLNQEVRN 138

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           P  S++G +      ++   DI   D      
Sbjct: 139 PTISADGSKIAFEAAENGQWDILVYDRNGRQL 170



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 44/133 (33%), Gaps = 17/133 (12%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           G  ++     +   +   S +  A  FDP  + P    + F         I +      Q
Sbjct: 24  GYPRIVNFPVDPGGR---SLNSRALEFDPAIAEP---YLVFASDRNGSQDIYLFDTSTRQ 77

Query: 383 ERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS------IDLNGRNETLIN 432
             LL      +     P  S  GR ++F+  + G++   LY        +L       + 
Sbjct: 78  TILLPGLNTLNEIASHPAVSEDGRYIVFAVNRRGESDIYLYDREFEQKRNLTDNLNQEVR 137

Query: 433 TPAYASDPQWVGF 445
            P  ++D   + F
Sbjct: 138 NPTISADGSKIAF 150


>gi|260463075|ref|ZP_05811278.1| WD-40 repeat protein [Mesorhizobium opportunistum WSM2075]
 gi|259031196|gb|EEW32469.1| WD-40 repeat protein [Mesorhizobium opportunistum WSM2075]
          Length = 517

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 90/300 (30%), Gaps = 36/300 (12%)

Query: 109 QVLVTGRVIKEGKDRLRVE----FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
             +V   V  +G+  +        +LWDV  +  I   +         + A  + D +  
Sbjct: 223 DAVVWLAVAPDGQSIMSASTDHVIKLWDVGGKHLI---RNLGVHKDMARTALYMPDGVSA 279

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
              G+ G+   R L                    DG  +      ++  + +   SP+ +
Sbjct: 280 LTAGDDGEIVLRKL-------------------ADGTVLHVFQSGQNGGVNKLAISPDGK 320

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
                     D   V + D   +     +      I A   S +GK+  +S   D  + +
Sbjct: 321 ----HAVSGHDTGNVIVWDLVNNSVLHVLTGHGWSISAVAVSPDGKQ-ALSGSIDGTLKL 375

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + +D                  A ++ D   ++  S   G   + V   +   + +  + 
Sbjct: 376 WDID-SGKQLRSWHGHEQGTYGAVFTTDGHHLITGS---GDLTIKVWDLDSGREVKRFEG 431

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            E + +    S  G  +      G    +  M+          +   + A  ++P G  L
Sbjct: 432 HEGTVYTLALSADGKRLLSGSLDGTA-RLWDMETGNQIAMFDSQTGPIYAVAFAPDGTVL 490


>gi|110598158|ref|ZP_01386436.1| WD-40 repeat [Chlorobium ferrooxidans DSM 13031]
 gi|110340290|gb|EAT58787.1| WD-40 repeat [Chlorobium ferrooxidans DSM 13031]
          Length = 316

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 88/245 (35%), Gaps = 23/245 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG   ++  + D +     ++    D  +    FSP+ + +A  + D      + L
Sbjct: 89  KRLASGSTDSTARIWDAETGKCLHVCKGHDTAVRMVAFSPDSKVLASCSRDT----TIRL 144

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D             +S I +  +S +GK+ +      E   +   D++S     + N  
Sbjct: 145 WDVETGNELSVWRGHKSYIESLAYSHDGKKIV---SCGEEPVLKIWDVESG--RNIANYR 199

Query: 302 FINI---SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             +    +  +SPD   I F        ++ ++ +   +  ++ +  E +     ++P+G
Sbjct: 200 TNDTLSHAVVFSPDDKLIAFC---GRDAKVKIVDAATGEILKVLEGHEDAVRSVCFNPEG 256

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGS 416
             +A          I +      ++        L+  +   SP G+ +        D   
Sbjct: 257 TKVASAANDES---IRLWDVATGKQLHSYRGHTLEVQSVDISPDGKIIASGSD---DRRI 310

Query: 417 KLYSI 421
           KL+++
Sbjct: 311 KLWAV 315



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 70/206 (33%), Gaps = 12/206 (5%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N+          +   RFS + +K+   ++D+     V L D    ++   +    + + 
Sbjct: 25  NVIKTMEGHLDRVLGVRFSTDGKKLVSGSFDE----SVMLWDVESGKSLFTMKGHETWVE 80

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES 320
              +S +GKR   S   D    I+  D ++     +       +   ++SPDS  +   S
Sbjct: 81  CIDYSRDGKRLA-SGSTDSTARIW--DAETGKCLHVCKGHDTAVRMVAFSPDSKVLASCS 137

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + +      ++  + +  ++      +S  G  I           I  ++   
Sbjct: 138 R---DTTIRLWDVETGNELSVWRGHKSYIESLAYSHDGKKIVSCGEEP-VLKIWDVESGR 193

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIF 406
           +       D+   A  +SP  + + F
Sbjct: 194 NIANYRTNDTLSHAVVFSPDDKLIAF 219



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 67/173 (38%), Gaps = 20/173 (11%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQI 316
           +L  RFS++GK+ + S   DE++ ++  D++S  +  L              YS D  ++
Sbjct: 37  VLGVRFSTDGKKLV-SGSFDESVMLW--DVESGKS--LFTMKGHETWVECIDYSRDGKRL 91

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              S         +  +       + +  + +     +SP   ++A          I + 
Sbjct: 92  ASGST---DSTARIWDAETGKCLHVCKGHDTAVRMVAFSPDSKVLASCSRDTT---IRLW 145

Query: 377 KKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +   E  +     S +++  +S  G+ ++       +   K++ ++ +GRN
Sbjct: 146 DVETGNELSVWRGHKSYIESLAYSHDGKKIV---SCGEEPVLKIWDVE-SGRN 194



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 63/194 (32%), Gaps = 29/194 (14%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWDV+   ++         + WR   H    +        K     +I+   E  V  
Sbjct: 142 IRLWDVETGNEL---------SVWR--GHKSYIESLAYSHDGK-----KIVSCGEEPV-- 183

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L + D +         + D +     FSP+ + +A+   D +    V ++D    
Sbjct: 184 -----LKIWDVESGRNIANYRTNDTLSHAVVFSPDDKLIAFCGRDAK----VKIVDAATG 234

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              K +      + +  F+  G +   S   DE++ ++ V                  S 
Sbjct: 235 EILKVLEGHEDAVRSVCFNPEGTKVA-SAANDESIRLWDV-ATGKQLHSYRGHTLEVQSV 292

Query: 308 SYSPDSSQIVFESD 321
             SPD   I   SD
Sbjct: 293 DISPDGKIIASGSD 306


>gi|145546219|ref|XP_001458793.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124426614|emb|CAK91396.1| unnamed protein product [Paramecium tetraurelia]
          Length = 675

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 104/301 (34%), Gaps = 35/301 (11%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI--------SDDI------------YQSI 166
             RLWDVK  +Q +  +     A  + +  +         SDD             Y  +
Sbjct: 310 SIRLWDVKTAQQYL--QLDGHTAQIQSVCFSSDNTKLASGSDDNSICLWDVKTGQKYHQL 367

Query: 167 TGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            G  G  N+        ++ SG    S+   D                +    FSP+   
Sbjct: 368 DGHTGYVNAVCFSPDCTTLASGSFDYSIRFWDVKTGQQAAKLDGHTHEVRFVCFSPDGTT 427

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A A++D+     V++ D         I      + +  FS +G     S   D ++ ++
Sbjct: 428 LASASWDN----SVFIWDVIKREQKVSIDGHTKQVTSVCFSPDGTALA-SGSYDNSIRLW 482

Query: 286 SVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             D+Q+     +L   +    S  +SPD + +   SD      + +       QK   + 
Sbjct: 483 --DIQTILQYHQLDCHIDSIRSVCFSPDGTTLASGSD---DYTIRLWDVKTGQQKIKLEG 537

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             +      +SP G  +A +        +  +K+   + ++   +  +++  +S  G +L
Sbjct: 538 HSSYVISICFSPDGFTLA-SGSGDCSVRLWDVKQGQQKAQINGHNDYVRSVCFSHDGNTL 596

Query: 405 I 405
            
Sbjct: 597 A 597



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 47/287 (16%), Positives = 89/287 (31%), Gaps = 39/287 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       R WDVK  +Q          A      H    ++        G     
Sbjct: 384 TTLASGSFDYSIRFWDVKTGQQ---------AAKLDGHTH----EVRFVCFSPDG----- 425

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ S    NS+ + D      +       + +    FSP+   +A  +YD+   
Sbjct: 426 -----TTLASASWDNSVFIWDVIKREQKVSIDGHTKQVTSVCFSPDGTALASGSYDN--- 477

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D +      ++      I +  FS +G     S   D  + ++  D+++   + 
Sbjct: 478 -SIRLWDIQTILQYHQLDCHIDSIRSVCFSPDGTTLA-SGSDDYTIRLW--DVKTGQQKI 533

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L       IS  +SPD   +   S   G   + +       QK              +S
Sbjct: 534 KLEGHSSYVISICFSPDGFTLASGS---GDCSVRLWDVKQGQQKAQINGHNDYVRSVCFS 590

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPS 400
             G+ +A      +   I +   +  Q   + + E   L +  +SP 
Sbjct: 591 HDGNTLA---SGCDDLTIRLWNVETQQVIHQFVTEIKYLFSTHFSPD 634



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 65/198 (32%), Gaps = 12/198 (6%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            V Y     +D   + L D +  +   ++    + I +  FSS+  +        +   I
Sbjct: 298 MVVYQHLVVKDN-SIRLWDVKTAQQYLQLDGHTAQIQSVCFSSDNTKLA---SGSDDNSI 353

Query: 285 YSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
              D+++     +L        +  +SPD + +   S       +         Q     
Sbjct: 354 CLWDVKTGQKYHQLDGHTGYVNAVCFSPDCTTLASGSF---DYSIRFWDVKTGQQAAKLD 410

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                     +SP G  +A   +    F   V+K++  +  +      + +  +SP G +
Sbjct: 411 GHTHEVRFVCFSPDGTTLASASWDNSVFIWDVIKRE-QKVSIDGHTKQVTSVCFSPDGTA 469

Query: 404 LIFSRKKDGDTGSKLYSI 421
           L        D   +L+ I
Sbjct: 470 LASGSY---DNSIRLWDI 484



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 66/225 (29%), Gaps = 36/225 (16%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI-AHTISDDIYQSITGEKGDFNS 175
                       RLWD+   + I+          + ++  H   D I        G    
Sbjct: 468 TALASGSYDNSIRLWDI---QTIL---------QYHQLDCHI--DSIRSVCFSPDG---- 509

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                  ++ SG    ++ + D      +         +    FSP+     +       
Sbjct: 510 ------TTLASGSDDYTIRLWDVKTGQQKIKLEGHSSYVISICFSPDG----FTLASGSG 559

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT- 294
              V L D +  +   +I      + +  FS +G          + + I   ++++    
Sbjct: 560 DCSVRLWDVKQGQQKAQINGHNDYVRSVCFSHDGNTLA---SGCDDLTIRLWNVETQQVI 616

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            +    +    S  +SPD + +      +G   + +      +QK
Sbjct: 617 HQFVTEIKYLFSTHFSPDCTTLA-SGCIDGY--ISLWDVKTGEQK 658


>gi|82703420|ref|YP_412986.1| peptidase S9, prolyl oligopeptidase active site region
           [Nitrosospira multiformis ATCC 25196]
 gi|82411485|gb|ABB75594.1| Peptidase S9, prolyl oligopeptidase active site protein
           [Nitrosospira multiformis ATCC 25196]
          Length = 615

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 68/182 (37%), Gaps = 10/182 (5%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQI 316
           + I+   FS++ +R L S  +    + Y++ +     E LT +      S S+ P   ++
Sbjct: 13  TSIMGASFSADEERILFSSNESGIFNAYTLPVTGGTAEALTCSASDTTFSVSFFPHDDRV 72

Query: 317 VFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFA 372
           +   D  G     L+++  +G ++  ++  ++       WSP G    +A  +     F 
Sbjct: 73  LITRDYHGDENYHLFLLAPDGEEED-LTPGEKLKAQFMGWSPDGQAFYVATNELDARFFD 131

Query: 373 IGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +     +     LL          P  S   R +  +R     + S +Y  D+  R    
Sbjct: 132 VYRYDAETFARTLLYRNHQGFDLGP-ISRDERWIALNRSHTA-SDSDIYLFDVEKREVRH 189

Query: 431 IN 432
           + 
Sbjct: 190 LT 191



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 32/103 (31%), Gaps = 7/103 (6%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
            S     +S   + I F+      F    +   G     L         + ++ P    +
Sbjct: 13  TSIMGASFSADEERILFSSNESGIFNAYTLPVTGGTAEALTCSASDTTFSVSFFPHDDRV 72

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY---ASDPQWVG 444
           + +R   GD    L+ +  +G  E L  TP     A    W  
Sbjct: 73  LITRDYHGDENYHLFLLAPDGEEEDL--TPGEKLKAQFMGWSP 113



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 54/268 (20%), Positives = 87/268 (32%), Gaps = 49/268 (18%)

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD-- 135
           +F L      +          +F  W+  G    V         + L   F  +DV    
Sbjct: 86  LFLLAPDGEEEDLTPGEKLKAQFMGWSPDGQAFYV-------ATNELDARF--FDVYRYD 136

Query: 136 ----RKQIIGKKFFS-----SPASWRKIA----HTISD-DIY---------QSITGEKG- 171
                + ++ +              R IA    HT SD DIY         + +T  +G 
Sbjct: 137 AETFARTLLYRNHQGFDLGPISRDERWIALNRSHTASDSDIYLFDVEKREVRHLTPHEGS 196

Query: 172 --------DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                   D  SR LF   +  S      LC  D   + +     S +  +    FS + 
Sbjct: 197 ISFHAETFDSTSRKLFFLTTEGSEFKH--LCTYDLT-SGVVCDHESAEWDVMYTYFSYDG 253

Query: 224 Q-KVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + +V     D   ++RV  + D   ++  K     +  I    FS N  R    V  D +
Sbjct: 254 RFRVTGINADGSIVVRVVEIEDGEREKPVKLPALPQGEIRGVVFSQNSTRMAFYVNGDRS 313

Query: 282 MD-IYSVDLQSNATERLTNTLFINISAS 308
            D ++  D  +    +LT +L   I  S
Sbjct: 314 PDNLFVHDFSTGQFRQLTQSLNKEIDPS 341


>gi|260906981|ref|ZP_05915303.1| tricorn protease [Brevibacterium linens BL2]
          Length = 1098

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 68/193 (35%), Gaps = 21/193 (10%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G         D    ++ V  +     RLT+      S  +SPD S+I + S R+G  +L
Sbjct: 14  GDLITFVADDD----VWLVAAEGGRAWRLTSDHAPARSPRFSPDGSRIAYVSHRDGHPEL 69

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---FSGEKFAIGVMKKDGSQERL 385
            + +       R++     +     W+    ++  +    F      +  +  DGS ERL
Sbjct: 70  MLAEVASGSLHRLTWQGSTAMTMLGWADDEHVLIGSNAGEFESRNHVVRSVGIDGSVERL 129

Query: 386 ---LVEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLY---SIDLNGRNET----LI 431
                        +     +P  R     ++  G T  +L+   S D +G        L 
Sbjct: 130 SWGRASGMARHHSSVTALATPYSREPAHWKRYRGGTAPRLWLDRSADASGSGVQWQRLLR 189

Query: 432 NTPAYASDPQWVG 444
              A  +DP WVG
Sbjct: 190 EEEASLTDPLWVG 202



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 66/184 (35%), Gaps = 12/184 (6%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQ 327
           G+ A I+  + E          +    R+        +  +  P    +   S  +G  +
Sbjct: 357 GQAAYITDVEGEDAIEVRATSATATERRIGAGALGRVLHMTSDPSGKTLATISH-DGSVR 415

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-VMKKDGSQER-- 384
           L  ++      + + +        P +SP G  + +++ +  +  +  +M  D   +R  
Sbjct: 416 L--VEVGNGKTRLVGRSGFGEARSPEFSPDGRYLIWSQPTQGEEQLAQLMLVDTKSDREA 473

Query: 385 --LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     N  +PT+S  G+ ++F   +  D     +S DL+          P  A++P 
Sbjct: 474 LALTSGKYNDYSPTFSADGKYIVFLSDRTFDPAYNQHSFDLSFNGVTRPWLLPLSATEPA 533

Query: 442 WVGF 445
              F
Sbjct: 534 --PF 535



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 8/127 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A  R +       +      P+ + +A  ++D      V L++    +      +     
Sbjct: 380 ATERRIGAGALGRVLHMTSDPSGKTLATISHDG----SVRLVEVGNGKTRLVGRSGFGEA 435

Query: 261 LAPRFSSNGKRALISVQKDEA---MDIYSVDLQS-NATERLTNTLFINISASYSPDSSQI 316
            +P FS +G+  + S           +  VD +S      LT+  + + S ++S D   I
Sbjct: 436 RSPEFSPDGRYLIWSQPTQGEEQLAQLMLVDTKSDREALALTSGKYNDYSPTFSADGKYI 495

Query: 317 VFESDRE 323
           VF SDR 
Sbjct: 496 VFLSDRT 502



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 77/197 (39%), Gaps = 37/197 (18%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR-------KIAHTISDDIY 163
           +V G+  +           + DV+    I  +   ++    R       ++ H  SD   
Sbjct: 351 VVLGQTGQAA--------YITDVEGEDAIEVRATSATATERRIGAGALGRVLHMTSDPSG 402

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +++     D + R++ V      G  K  L            +  S       P FSP+ 
Sbjct: 403 KTLATISHDGSVRLVEV------GNGKTRL------------VGRSGFGEARSPEFSPDG 444

Query: 224 QKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--D 279
           + + ++  T  +E + ++ L+DT+ DR    + + +    +P FS++GK  +    +  D
Sbjct: 445 RYLIWSQPTQGEEQLAQLMLVDTKSDREALALTSGKYNDYSPTFSADGKYIVFLSDRTFD 504

Query: 280 EAMDIYSVDLQSNATER 296
            A + +S DL  N   R
Sbjct: 505 PAYNQHSFDLSFNGVTR 521



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 9/136 (6%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              + +   DD     V+L+     RA  R+ +  +   +PRFS +G R      +D   
Sbjct: 14  GDLITFVADDD-----VWLVAAEGGRAW-RLTSDHAPARSPRFSPDGSRIAYVSHRDGHP 67

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE---GKEQLYVMQSNGSDQK 339
           ++   ++ S +  RLT      ++     D   ++  S+      +  +          +
Sbjct: 68  ELMLAEVASGSLHRLTWQGSTAMTMLGWADDEHVLIGSNAGEFESRNHVVRSVGIDGSVE 127

Query: 340 RISQDKEASYFDPVWS 355
           R+S  + +       S
Sbjct: 128 RLSWGRASGMARHHSS 143



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 92/249 (36%), Gaps = 33/249 (13%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++  +G    +   S       PRFSP+  ++AY ++ D     + L +       +
Sbjct: 24  DVWLVAAEGGRA-WRLTSDHAPARSPRFSPDGSRIAYVSHRDGHP-ELMLAEVASGSLHR 81

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFINISASY 309
                 + +    ++ +    + S   +     + V       + ERL+      ++  +
Sbjct: 82  LTWQGSTAMTMLGWADDEHVLIGSNAGEFESRNHVVRSVGIDGSVERLSWGRASGMARHH 141

Query: 310 S-------PDSSQIV-FESDREGK-EQLYV---MQSNGSDQ--KRISQDKEASYFDPVWS 355
           S       P S +   ++  R G   +L++     ++GS    +R+ +++EAS  DP+W 
Sbjct: 142 SSVTALATPYSREPAHWKRYRGGTAPRLWLDRSADASGSGVQWQRLLREEEASLTDPLWV 201

Query: 356 PQGDLIA------FTKFSGEKFAIGVMK----KDG---SQERLLVEDSNLQAPT--WSPS 400
               +I       F   + E+  + +      + G    + R L   +  +      +  
Sbjct: 202 GDSLVITSDKAASFPHHANEQANLWIWDGLATRSGGEPGEPRQLTFQTEAEGYVRNATTD 261

Query: 401 GRSLIFSRK 409
           G  +++  +
Sbjct: 262 GTRIVWHSR 270


>gi|154489912|ref|ZP_02030173.1| hypothetical protein PARMER_00141 [Parabacteroides merdae ATCC
           43184]
 gi|154089354|gb|EDN88398.1| hypothetical protein PARMER_00141 [Parabacteroides merdae ATCC
           43184]
          Length = 508

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 81/491 (16%), Positives = 155/491 (31%), Gaps = 103/491 (20%)

Query: 13  MKINLC-LLLVLIGGFFPTSIHAFVKVATN-----------SANYSPVSIAFTKFVSIDE 60
           M++N+  +LL+ + G +    H    +  N                PV+IA   F   DE
Sbjct: 1   MRLNIFYILLIALCGLYGCKNHQQPIIKENLNILPTIYPEYQGALLPVNIAPLNFKIQDE 60

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
               + ++           N I+  +      +   IP  + W  L         + +  
Sbjct: 61  GDEWMIQIQ-------GKGNPITITAH-----DAVEIP-IKRWRQL---------LHQNQ 98

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
              L +      V  RK+  G+ +  SP +W     +I   +   +        + +   
Sbjct: 99  GGSLSIT-----VSSRKK--GEWYQYSPFTWDVSTDSIDSHLAYRLIEPTYANWNSMAIC 151

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
              + S   +  +    + G N                  PN+           +   + 
Sbjct: 152 QRELSS-FKETEIISNKKSGQNCINCHTFNQGN-------PNE---MVMHMRKINAGTIL 200

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----------------KDEAMDI 284
           +      +   +  +  S  + P +  +GK+   S                   D   DI
Sbjct: 201 IQGGACQKLNTKTPHTISNFVYPDWHPSGKQIAFSTNLTQMSFYDAHPKIIEVYDTQSDI 260

Query: 285 YSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFES-DR---------EGKEQLYVM 331
              D+  N       L N   +     +SPD  Q+ F + DR           K ++  +
Sbjct: 261 VLYDISKNEVYTSPLLANANKLENFPFFSPDGKQLYFCTCDRIDSLPQQFSNIKYRICSI 320

Query: 332 QSNGSD---QKRI-----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---- 379
             +  +    K++       +   S   P  SP G  IA +      F+  + + D    
Sbjct: 321 GFDPQNNQFSKQVDTLIDLTNAGKSVTLPSISPDGQFIACSAAPHGCFSSWIPESDLYLY 380

Query: 380 GSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYS--IDLNGRNETLI 431
            ++ + L+  +   +P      TWS + R +IFS +++    ++LY   ID  G      
Sbjct: 381 NTKTKKLIAATEWNSPEAESCTTWSSNSRWVIFSSRREDGIYNRLYIAHIDSVGNLSKPF 440

Query: 432 NTPAYASDPQW 442
             P    DP +
Sbjct: 441 LLP--QRDPTY 449


>gi|153869041|ref|ZP_01998740.1| WD-40 repeat protein [Beggiatoa sp. PS]
 gi|152074394|gb|EDN71253.1| WD-40 repeat protein [Beggiatoa sp. PS]
          Length = 573

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 99/271 (36%), Gaps = 35/271 (12%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +Y +     G          + +++     +  + D  G  +          ++   FSP
Sbjct: 313 VYHASFSPNG----------QRMITTSSDGTARLWDNTGQQL-VEFKGHTGDIYRAAFSP 361

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS------ 275
           N Q++  A+ D        L +    +    +   R  +    FS NG+  + +      
Sbjct: 362 NGQRIVTASKDG----TARLWNANTGKLINTLTGHRGEVFHADFSPNGRLIVTTAGDLGD 417

Query: 276 --VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                D+   ++  +       +L+      I A++SPDS Q++  S  +   +L+ ++ 
Sbjct: 418 KDYNNDKTARLW--NSNGQLITQLSGHQKDVIYATFSPDSQQVITTS-WDTTARLWNVR- 473

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SN 391
               Q  +    + +     +SP G  +       +K A  +   +  +   ++    + 
Sbjct: 474 --GQQLAVFSGHKDAVHHAAFSPNGLRVVTAAADNDKTA-RLWNANTKKLITVLSGHQAR 530

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +    +SP G+ ++ + K   D  ++L++ +
Sbjct: 531 VWRVAFSPDGQRIVTASK---DKTARLWNAN 558



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 105/307 (34%), Gaps = 33/307 (10%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT--GEKGDFNSRILFVSESVVSG 187
           L +   ++ +   +F +   S R    +    + Q  +   E    N  IL VS    S 
Sbjct: 231 LSEAVAKRILSENRFVNVRTSTRPGPESAGIVLEQRPSEGTEVPPNNPVILIVSSGPTSA 290

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
           +  N +      G             ++   FSPN Q++   + D    L         D
Sbjct: 291 MPPNQMTQSTNTG----LTLSGHRGSVYHASFSPNGQRMITTSSDGTARL--------WD 338

Query: 248 RAPKRIGNFRSMILA---PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
              +++  F+          FS NG+R + +  KD    ++  +  +      LT     
Sbjct: 339 NTGQQLVEFKGHTGDIYRAAFSPNGQRIV-TASKDGTARLW--NANTGKLINTLTGHRGE 395

Query: 304 NISASYSPDSSQIVFESDREGKEQLY------VMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              A +SP+   IV  +   G +         +  SNG    ++S   +       +SP 
Sbjct: 396 VFHADFSPNGRLIVTTAGDLGDKDYNNDKTARLWNSNGQLITQLS-GHQKDVIYATFSPD 454

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGS 416
              +  T +        +    G Q  +     + +    +SP+G  ++ +   D D  +
Sbjct: 455 SQQVITTSWDTTA---RLWNVRGQQLAVFSGHKDAVHHAAFSPNGLRVV-TAAADNDKTA 510

Query: 417 KLYSIDL 423
           +L++ + 
Sbjct: 511 RLWNANT 517


>gi|168699817|ref|ZP_02732094.1| NB-ARC domain protein [Gemmata obscuriglobus UQM 2246]
          Length = 962

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 82/279 (29%), Gaps = 15/279 (5%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            I  ++    G      +     +VS      L     D      +       +    FS
Sbjct: 606 AIMNALAHPGGV-TGCAVLGGAGLVSVGQDKVLKRWRADAPGPVRVLAGHTGAVHAAVFS 664

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+  ++       E    V + DT   +   +I +  + +    FS NGK     +   +
Sbjct: 665 PDGNRIVSGGNWPEGDKTVRVWDTATGQETLKI-DLPTQVAMVAFSPNGK---FVLAAGD 720

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               Y +D  +    R        +   ++S D  Q++        +   +  +  + + 
Sbjct: 721 DHSSYLLDASTGQVVRKFRGHADAVHGVAFSHDGKQVLTC---GADKTARLWDTETAKEL 777

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           +             + P G   A +        +  +       +     +     + SP
Sbjct: 778 KPFTGHTGLVRRVAFHPDGRH-ALSAGRDGVVRMWELDTAKEVRQFRASGNWADCLSVSP 836

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +G+ +       G   +K+Y ++      TL   P   +
Sbjct: 837 NGKLVAV-----GGKETKVYEVETGRLVHTLDAHPYGVT 870



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 62/400 (15%), Positives = 128/400 (32%), Gaps = 88/400 (22%)

Query: 46  SPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNS 105
           +P+++A     S+  +  +   V  +D  RS              +   +       +++
Sbjct: 365 TPLALAAAPNGSLVAVATEEQGVTLRD-ARSG--------EHLGDLKGHEDAVTCLAFSA 415

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
            G + L +G   K          RLWD   RK++   K            HT  + +Y  
Sbjct: 416 NG-RALASGSADKT--------VRLWDSVTRKELAVLK-----------GHT--NWVYAV 453

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQ 224
                G          ++V +G    ++ + D   G  IR +   R  +     FS + +
Sbjct: 454 AFSPDG----------KTVATGAYDKTVRMWDVATGKQIRSIDAHRGSVRAV-AFSADGK 502

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            VA           V L +         +   +  +    FS +GK    S  +D  + +
Sbjct: 503 TVA----SGGSDRTVKLWNAETGALLTALPGHQGSVRGVAFSPDGKTLA-SGSEDGTVRV 557

Query: 285 YSVDLQSNATERLTNT---------LFINISASYSPDSSQIVFESDRE------------ 323
           +SV  ++     L               +   S   D +  V+++               
Sbjct: 558 WSVS-EAKELIVLRGHTDEVVCVSYTGPDGLVSGGADGTVRVWDATTGTAIMNALAHPGG 616

Query: 324 ---------------GKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKF 366
                          G+++ L   +++     R+      +    V+SP G+ I     +
Sbjct: 617 VTGCAVLGGAGLVSVGQDKVLKRWRADAPGPVRVLAGHTGAVHAAVFSPDGNRIVSGGNW 676

Query: 367 SGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
                 + V      QE L ++  + +    +SP+G+ ++
Sbjct: 677 PEGDKTVRVWDTATGQETLKIDLPTQVAMVAFSPNGKFVL 716



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 102/333 (30%), Gaps = 47/333 (14%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW------RKI--------AH 156
           +  G         + V     ++  +K++        P S       R++        A 
Sbjct: 70  VAYGGPTSPSGGFVAVR----ELDTKKELFTLALRLPPNSVAFSPDGRRVLIAGTDPEAR 125

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA--NIRYLTPSRDQIL 214
            +  D  +++   K + ++R +F  +         +  V   D A  +     P     L
Sbjct: 126 LVEGDTGEAVFSLKLNDSTRAVFSPDGKTIATGTAAAAVQLWDAATGDELVKLPGATGRL 185

Query: 215 FEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
               FSP+ +K+   +     +     RV++ D    R   ++      +L   F+++GK
Sbjct: 186 SSVAFSPDGKKLVACSAEQAMNMTSRGRVFVWDVPTQRLTTKLDTGPGFVLTAAFTTDGK 245

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----EGKE 326
                     +  +   DL +     +     +        D     F  D      G  
Sbjct: 246 TIA---TGGGSTQVRLWDLATGTERAVLAGPDVPF------DGVAFAFNGDIIAGLFGNG 296

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--- 383
            +YV  +              +      +P G  +      G + A+ V    G +E   
Sbjct: 297 TIYVWNTATQKSLSTLITPPGTCRAVALAPGGKTLV---TGGTRRAVKVWDLAGGKELAM 353

Query: 384 -RLLVEDSNLQAP---TWSPSGRSLIFSRKKDG 412
            +      +L  P     +P+G  +  + ++ G
Sbjct: 354 LQQDPLPRDLPTPLALAAAPNGSLVAVATEEQG 386



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 85/297 (28%), Gaps = 44/297 (14%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           +V+G    EG   +RV    WD    ++ +     +  A                     
Sbjct: 670 IVSGGNWPEGDKTVRV----WDTATGQETLKIDLPTQVAMV------------------- 706

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             F+    FV  +           ++D     +          +    FS + ++V    
Sbjct: 707 -AFSPNGKFVLAAGDDHSS----YLLDASTGQVVRKFRGHADAVHGVAFSHDGKQVLTCG 761

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D        L DT   +  K       ++    F  +G+   +S  +D  + ++ +D  
Sbjct: 762 ADK----TARLWDTETAKELKPFTGHTGLVRRVAFHPDGRH-ALSAGRDGVVRMWELDTA 816

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                +   +       S SP+   +       G ++  V +                  
Sbjct: 817 -KEVRQFRASGNWADCLSVSPNGKLVAV-----GGKETKVYEVETGRLVHTLDAHPYGVT 870

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
               S  G  +    + G      +      +E  +     + L + T+SP G+ ++
Sbjct: 871 TVSHSTDGKYVLTGGYDGSA---KLWDAGTGKELYQFRGHSNFLWSATFSPDGKWVL 924



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 76/233 (32%), Gaps = 25/233 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA------ 272
           FSP+ +              V L D        ++      + +  FS +GK+       
Sbjct: 148 FSPDGK----TIATGTAAAAVQLWDAATGDELVKLPGATGRLSSVAFSPDGKKLVACSAE 203

Query: 273 -LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +++     + ++ V  Q   T +L       ++A+++ D   I       G  Q+ + 
Sbjct: 204 QAMNMTSRGRVFVWDVPTQ-RLTTKLDTGPGFVLTAAFTTDGKTIA---TGGGSTQVRLW 259

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                 ++ +    +  +    ++  GD+IA   F      +       S   L+     
Sbjct: 260 DLATGTERAVLAGPDVPFDGVAFAFNGDIIA-GLFGNGTIYVWNTATQKSLSTLITPPGT 318

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE----TLINTPAYASDP 440
            +A   +P G++L+      G T   +   DL G  E         P     P
Sbjct: 319 CRAVALAPGGKTLV-----TGGTRRAVKVWDLAGGKELAMLQQDPLPRDLPTP 366



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 61/201 (30%), Gaps = 20/201 (9%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFI 303
              P  +      +     S +GKR      +      + +  +D +      L   L  
Sbjct: 45  HPTPVPLSGSSGEVHTLAVSPDGKRVAYGGPTSPSGGFVAVRELDTK-KELFTLALRLPP 103

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N S ++SPD  +++         +  +++ +  +   +   K       V+SP G     
Sbjct: 104 N-SVAFSPDGRRVLIA---GTDPEARLVEGDTGEA--VFSLKLNDSTRAVFSPDGKT--- 154

Query: 364 TKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKD-----GDTGS 416
                   A+ +       E  +L      L +  +SP G+ L+    +           
Sbjct: 155 IATGTAAAAVQLWDAATGDELVKLPGATGRLSSVAFSPDGKKLVACSAEQAMNMTSRGRV 214

Query: 417 KLYSIDLNGRNETLINTPAYA 437
            ++ +        L   P + 
Sbjct: 215 FVWDVPTQRLTTKLDTGPGFV 235


>gi|299140243|ref|ZP_07033409.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
 gi|298597782|gb|EFI53954.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
          Length = 745

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 97/315 (30%), Gaps = 84/315 (26%)

Query: 214 LFEPRFSPNQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           + +P+ SP+ + V ++  D   +++    +L    I    +            RFS +GK
Sbjct: 43  VSDPQVSPSGKWVLFSVTDVSLEKNTRTNHLWVVPIAGGKEVQLTSGDGETNGRFSPDGK 102

Query: 271 RALISVQKDEAMDIYSV---DLQSN--ATERLTNTLFINISASYSPDSSQIVFESD---- 321
             + S  +  +  I+     D      A  ++TN       A ++PDS   +F S+    
Sbjct: 103 SVMYSSTQGGSGQIWIAHWDDAAGTLAAGRQVTNLETEADGAIWAPDSEHFLFASNVYPE 162

Query: 322 ----------------------------------------REGK-------EQLYVMQSN 334
                                                   R            ++   + 
Sbjct: 163 CESQAAGSQRFTEEAQCNEEKDAAAAKNPVKALIFDHLLYRHWNSYQGAKHSHIFYASTA 222

Query: 335 GSDQKRISQ-----DKEASYF------DPVWSPQGDLIAFT---------KFSGEKFAIG 374
           G   + ++      D EA  F          SP G  +A+            + + + + 
Sbjct: 223 GGAPEDLTPASVVGDHEAPTFSLGGPLGYAISPDGKEVAYVVNLEKVPAASTNNDVYVLK 282

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS---KLYSID-LNGRNETL 430
           V     + +++     +   P +SP G+ L +  +      S   +L  +D  +G  + L
Sbjct: 283 VGAAPATAKKVSTSPGSDDGPLYSPDGKYLAWRSQARNGFESDKFRLMVMDRSSGAIKDL 342

Query: 431 IN-TPAYASDPQWVG 444
           +     +  +  W  
Sbjct: 343 MPKFDNWVDEFVWTP 357



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 16/160 (10%)

Query: 264 RFSSNGKRALI--------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             S +GK            +   +  + +  V       ++++ +   +    YSPD   
Sbjct: 252 AISPDGKEVAYVVNLEKVPAASTNNDVYVLKVGAAPATAKKVSTSPGSDDGPLYSPDGKY 311

Query: 316 IVFESD-REG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           + + S  R G    K +L VM  +    K +    +    + VW+P    + F   +  +
Sbjct: 312 LAWRSQARNGFESDKFRLMVMDRSSGAIKDLMPKFDNWVDEFVWTPDSKTVYFASGAAGE 371

Query: 371 FAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFS 407
             I   + +G        +++ +   +   SP+G+ L+ S
Sbjct: 372 EPIYKTEVEGASSGNTAEVIKSAEYGSLQISPNGKDLVLS 411



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 55/371 (14%), Positives = 119/371 (32%), Gaps = 92/371 (24%)

Query: 140 IGKKFFSSPASWRKIAHTISD-DIYQSITGEKGDFNSRILFVSESVVS---GIIKNSLCV 195
                 S+ A+ R +  T +D    + ++  +   + + +  S + VS       N L V
Sbjct: 18  AASAQTSNAAAKRPM--TFADLQAMKRVSDPQVSPSGKWVLFSVTDVSLEKNTRTNHLWV 75

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDTRIDRAPKR 252
           +   G     LT    +     RFSP+ + V Y++         +  +        A ++
Sbjct: 76  VPIAGGKEVQLTSGDGETNG--RFSPDGKSVMYSSTQGGSGQIWIAHWDDAAGTLAAGRQ 133

Query: 253 IGNFRSMILAPRFSSNGKRALI-------------------------------------- 274
           + N  +      ++ + +  L                                       
Sbjct: 134 VTNLETEADGAIWAPDSEHFLFASNVYPECESQAAGSQRFTEEAQCNEEKDAAAAKNPVK 193

Query: 275 -------------SVQKDEAMDIYSVDLQSNATERLTNTL--FINISASYS--------- 310
                        S Q  +   I+       A E LT       + + ++S         
Sbjct: 194 ALIFDHLLYRHWNSYQGAKHSHIFYASTAGGAPEDLTPASVVGDHEAPTFSLGGPLGYAI 253

Query: 311 -PDSSQIVFESD------REGKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            PD  ++ +  +            +YV++  +  +  K++S     S   P++SP G  +
Sbjct: 254 SPDGKEVAYVVNLEKVPAASTNNDVYVLKVGAAPATAKKVST-SPGSDDGPLYSPDGKYL 312

Query: 362 AFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDT 414
           A+       F  +KF + VM +     + L+   +       W+P  +++ F+    G+ 
Sbjct: 313 AWRSQARNGFESDKFRLMVMDRSSGAIKDLMPKFDNWVDEFVWTPDSKTVYFASGAAGEE 372

Query: 415 GSKLYSIDLNG 425
              +Y  ++ G
Sbjct: 373 P--IYKTEVEG 381


>gi|51598187|ref|YP_072378.1| hypothetical protein YPTB3902 [Yersinia pseudotuberculosis IP
           32953]
 gi|170022271|ref|YP_001718776.1| hypothetical protein YPK_0009 [Yersinia pseudotuberculosis YPIII]
 gi|186897410|ref|YP_001874522.1| hypothetical protein YPTS_4119 [Yersinia pseudotuberculosis PB1/+]
 gi|51591469|emb|CAH23140.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|169748805|gb|ACA66323.1| conserved hypothetical protein [Yersinia pseudotuberculosis YPIII]
 gi|186700436|gb|ACC91065.1| conserved hypothetical protein [Yersinia pseudotuberculosis PB1/+]
          Length = 433

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 20/160 (12%)

Query: 279 DEAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQL 328
           +   +         +  RLT T       +      +   SPD S I    +D  G  QL
Sbjct: 280 EGTENTLPAPPVGVSQRRLTYTTERPFPGLATRPRHWLRSSPDGSAIACLMNDDNGVVQL 339

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++  NG + ++++  +        WSPQG+ +AF   +    ++ +        R L  
Sbjct: 340 WLISPNGGELRQLTASQWGIQSAFSWSPQGEHLAFICDN----SVMLCDSLTGHLRRLTA 395

Query: 389 DS----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            S       A  +SP+G+ + F R+ DG   ++++++  +
Sbjct: 396 RSVVAPLADAVVFSPNGKKIAFMREIDG--WAQIFTVHAD 433



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 49/130 (37%), Gaps = 11/130 (8%)

Query: 212 QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +   PR     SP+   +A    DD  +++++L+        +   +   +  A  +S 
Sbjct: 308 GLATRPRHWLRSSPDGSAIACLMNDDNGVVQLWLISPNGGELRQLTASQWGIQSAFSWSP 367

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI---NISASYSPDSSQIVFESDREG 324
            G+             +   D  +    RLT    +     +  +SP+  +I F  + +G
Sbjct: 368 QGEHLAFICDNS----VMLCDSLTGHLRRLTARSVVAPLADAVVFSPNGKKIAFMREIDG 423

Query: 325 KEQLYVMQSN 334
             Q++ + ++
Sbjct: 424 WAQIFTVHAD 433



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 7/101 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++  +G  +R LT S+  I     +SP  + +A+   +      V L D+      +
Sbjct: 338 QLWLISPNGGELRQLTASQWGIQSAFSWSPQGEHLAFICDN-----SVMLCDSLTGHLRR 392

Query: 252 RIGN--FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                    +  A  FS NGK+     + D    I++V   
Sbjct: 393 LTARSVVAPLADAVVFSPNGKKIAFMREIDGWAQIFTVHAD 433


>gi|325929466|ref|ZP_08190593.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           perforans 91-118]
 gi|325540168|gb|EGD11783.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           perforans 91-118]
          Length = 706

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 82/274 (29%), Gaps = 51/274 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   V +A    +         L V  + TR    PKR+      + +P  S
Sbjct: 36  VSSPTLSPDGSVVLFAKRQAKTANGKPATSLWVRNLRTRDLAPPKRLTPEGWNVNSPALS 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y+  +     ++LT       S   SPD  +I F +   G  
Sbjct: 96  PDGKTVYFLSSKSGSQQLYAQPMAGGTPQQLTAFAVDVDSYKLSPDGKRIAFSA---GVF 152

Query: 327 QLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           Q                  +    +  D+        W+       F        A  V+
Sbjct: 153 QDCGSDLGCTKKKLGELKNNKASGVVYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVV 212

Query: 377 KKDGSQERLLVED-----SNLQAPTWSPSGRSLIFS-----------------------R 408
                   L  +            TWSP G S++ S                        
Sbjct: 213 GASAISATLAGDAPSKPFGGNDDYTWSPDGSSVVASVRIPQPHGPEASKNAKASGKPTGN 272

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +   T   LY +D  G++  +  T   A++P W
Sbjct: 273 DEPWQTNFDLYRLDATGKSAPVNLT---AANPAW 303



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 88/312 (28%), Gaps = 69/312 (22%)

Query: 183 SVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +G    SL V +   RD A  + LTP    +   P  SP+ + V + +   +   + 
Sbjct: 56  KTANGKPATSLWVRNLRTRDLAPPKRLTPEGWNVN-SPALSPDGKTVYFLS--SKSGSQQ 112

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                     P+++  F   + + + S +GKR   S            DL     ++L  
Sbjct: 113 LYAQPMAGGTPQQLTAFAVDVDSYKLSPDGKRIAFSA---GVFQDCGSDL-GCTKKKLGE 168

Query: 300 TLFINISA------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE- 346
                 S             +++      +F ++             G+     +   + 
Sbjct: 169 LKNNKASGVVYDQLFVRHWDTWNDGRRNTLFVAE---LPAAGAKAVVGASAISATLAGDA 225

Query: 347 -----ASYFDPVWSPQGDLIAFTKFSG-------------------------EKFAIGVM 376
                    D  WSP G  +  +                               F +  +
Sbjct: 226 PSKPFGGNDDYTWSPDGSSVVASVRIPQPHGPEASKNAKASGKPTGNDEPWQTNFDLYRL 285

Query: 377 KKDG-SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETL 430
              G S    L     +    P +S  G++L +   K     +    L ++D+       
Sbjct: 286 DATGKSAPVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVVSGKTRE 345

Query: 431 INTPAYASDPQW 442
           I        P+W
Sbjct: 346 IA-------PKW 350



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 58/167 (34%), Gaps = 19/167 (11%)

Query: 188 IIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                L  +D  G +    LT +       P FS + + + Y                R 
Sbjct: 277 QTNFDLYRLDATGKSAPVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGF-----EADRF 331

Query: 247 DRAPKRIGNFRSMILAPRF---------SSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                 + + ++  +AP++         S +G     S  +     ++ +D+ S    +L
Sbjct: 332 GLMAMDVVSGKTREIAPKWDRSAGEIVLSEDGASLYTSADELGEHPLFKIDIASGEATKL 391

Query: 298 TNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQ 343
                ++   + +   + + F  +  +  +Q++V  + G   + ISQ
Sbjct: 392 VGEGSVHA-PTLA--GNTLAFTRNSLKSGDQIFVSDTQGQGLRAISQ 435


>gi|134101374|ref|YP_001107035.1| WD-40 repeat-containing protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|133913997|emb|CAM04110.1| WD-40 repeat [Saccharopolyspora erythraea NRRL 2338]
          Length = 1255

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 77/222 (34%), Gaps = 28/222 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-------NFRSMILAPRFSSNGK 270
            FSP+ + +A A        +V++ D    R   R+        +  +   A  FS +G 
Sbjct: 638 AFSPDGRLLASADD------QVHVWDVATRRLRTRLTAPAANRTDRPAPYGAAAFSPDGT 691

Query: 271 RALISVQ-KDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           R   S       +D++ +D      + L +T    ++   +S D   +       G  ++
Sbjct: 692 RVAASTTLNTGRIDVWRLDAPDQPVKSLPSTAEGNDLE--FSADGRLLA----AAGGTRI 745

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +   +    + I      + F   +SP G  +A++        +  +         L E
Sbjct: 746 ELWDLDTG--RLIEALPVENGFSVSFSPDGRTLAYSASYPVGVGLWDL-AARRHLPALPE 802

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                 P +S  GR+L         TG  ++  DL  R   +
Sbjct: 803 SYKHFDPRFSTDGRTLATMGTDG--TGPIIW--DLATRTPKV 840



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 88/285 (30%), Gaps = 31/285 (10%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR++    D++ V    WDV  R+        ++  + R   +  +             F
Sbjct: 643 GRLLASADDQVHV----WDVATRRLRTRLTAPAANRTDRPAPYGAA------------AF 686

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +     V+ S      +  +  +D     ++ L  + +    E  FS + + +A      
Sbjct: 687 SPDGTRVAASTTLNTGRIDVWRLDAPDQPVKSLPSTAEGNDLE--FSADGRLLA-----A 739

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               R+ L D    R  + +        +  FS +G+    S      + ++  DL +  
Sbjct: 740 AGGTRIELWDLDTGRLIEALPVENG--FSVSFSPDGRTLAYSASYPVGVGLW--DLAARR 795

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                   + +    +S D   +           ++         K +  D++    D  
Sbjct: 796 HLPALPESYKHFDPRFSTDGRTLATMGTDGTGPIIW--DLATRTPK-VRIDQDMVILDFA 852

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           +SP  D   F   +            G   RL+    +  + + S
Sbjct: 853 FSP-ADQSLFIANADGSIDRRDHNGSGPPVRLVPARPDQGSSSMS 896



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 76/279 (27%), Gaps = 30/279 (10%)

Query: 171  GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            G       FV+ +        ++ V D        +    D              +A   
Sbjct: 979  GFSAEGRRFVAVTGADDPRHRTITVGDVATRTPIAVVTGPDTYRAVNA---QGTLLATT- 1034

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                D L V+ ++    R    + + +    A  FS + +    + + D    ++ +   
Sbjct: 1035 --GPDGLHVWNVEGPAARLIHTVTDVKP-DAAIAFSPDSQHLA-TTRVDGTFGVWDL-TN 1089

Query: 291  SNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
              +    + +    ++   YSP+   +        +    V   N + +  +        
Sbjct: 1090 GRSITLPVPDGPAGDLVPRYSPNGRILAV------RTATGVALWNATTRTPLGNIPGHFG 1143

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT------WSPSGRS 403
                +SP    +A         AI +           +  +    P       WSP G  
Sbjct: 1144 RALAFSPDSQRLALATRDN---AILIRDLPSRTRWAALTGTVADTPDAISTLIWSPDGTR 1200

Query: 404  LIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQ 441
            L  +          L++ D       L +T      DP 
Sbjct: 1201 LAAAA----GNSLTLWTTDPEQATSALCDTLARDFRDPA 1235



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 75/252 (29%), Gaps = 34/252 (13%)

Query: 147  SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII-------------KNSL 193
            S    R +A T +DD     T   GD  +R      +                    + L
Sbjct: 981  SAEGRRFVAVTGADDPRHR-TITVGDVATRTPIAVVTGPDTYRAVNAQGTLLATTGPDGL 1039

Query: 194  CVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
             V + +G   R +    D +      FSP+ Q +A       D        T        
Sbjct: 1040 HVWNVEGPAARLIHTVTDVKPDAAIAFSPDSQHLATTRV---DGTFGVWDLTNGRSITLP 1096

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSP 311
            + +  +  L PR+S NG+   +      A+   +          L N       + ++SP
Sbjct: 1097 VPDGPAGDLVPRYSPNGRILAVRTATGVALWNAT------TRTPLGNIPGHFGRALAFSP 1150

Query: 312  DSSQIVFESDREGKEQLYVMQSNG----SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            DS ++           + +         +       D   +    +WSP G  +A    +
Sbjct: 1151 DSQRLALA---TRDNAILIRDLPSRTRWAALTGTVADTPDAISTLIWSPDGTRLA--AAA 1205

Query: 368  GEKFAIGVMKKD 379
            G    +     +
Sbjct: 1206 GNSLTLWTTDPE 1217



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 75/234 (32%), Gaps = 25/234 (10%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FS   ++    T  D+   R   +     R P  +        A   ++ G     +   
Sbjct: 980  FSAEGRRFVAVTGADDPRHRTITVGDVATRTPIAVVTGPDTYRA--VNAQGTLLATT--- 1034

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 ++  +++  A   +      ++      ++SPDS  +   +  +G   ++ + +N
Sbjct: 1035 -GPDGLHVWNVEGPAARLI--HTVTDVKPDAAIAFSPDSQHLA-TTRVDGTFGVWDL-TN 1089

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            G        D  A    P +SP G ++A    +G    + +           +     +A
Sbjct: 1090 GRSITLPVPDGPAGDLVPRYSPNGRILAVRTATG----VALWNATTRTPLGNIPGHFGRA 1145

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP----QWVG 444
              +SP  + L  + +   D    +  +    R   L  T A   D      W  
Sbjct: 1146 LAFSPDSQRLALATR---DNAILIRDLPSRTRWAALTGTVADTPDAISTLIWSP 1196



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 65/193 (33%), Gaps = 16/193 (8%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR-ALISV 276
             FS   + +    Y   ++        R D  P   G   S      FS+ G+R   ++ 
Sbjct: 936  TFSAEGRNLL-GAYKAGELTTWATEQLRRDSTPLLPGT--SDATLAGFSAEGRRFVAVTG 992

Query: 277  QKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D      +V D+ +     +      +   + +   + +       G + L+V    G
Sbjct: 993  ADDPRHRTITVGDVATRTPIAVVTGP--DTYRAVNAQGTLLATT----GPDGLHVWNVEG 1046

Query: 336  SDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NL 392
               + I    +        +SP    +A T+  G  F +  +  +G    L V D     
Sbjct: 1047 PAARLIHTVTDVKPDAAIAFSPDSQHLATTRVDGT-FGVWDL-TNGRSITLPVPDGPAGD 1104

Query: 393  QAPTWSPSGRSLI 405
              P +SP+GR L 
Sbjct: 1105 LVPRYSPNGRILA 1117


>gi|327334170|gb|EGE75884.1| tricorn protease protein [Propionibacterium acnes HL097PA1]
          Length = 1086

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 9   PDVHGDLVVFTADDD----LWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A  F   W    + + F+            +  +  DG
Sbjct: 65  RPEVFVIDLATGDQRRLTWLGAARSFVVGWQDD-EHVVFSSPHQTNDVGLAWLYTVSLDG 123

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 124 HVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 170



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLATGDQRRLTWLGAARS 89

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G  ++           D   S  G + 
Sbjct: 90  FVVGWQDDEHVVFSSPHQTNDVGLAWLYTVSLDGHVERL----GYGPGMDLAVSSDGAVA 145

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +      +   L+ + N     ++ +GR        
Sbjct: 146 VVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAGRYSVGWIDG 205

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 206 RLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPR 252



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 90/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 23  DLWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLATGDQRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +      +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 81  LTWLGAARSFVVGW-QDDEHVVFSSPHQTNDVGLAWLYTVSLD-GHVERLGYGPGMDL-- 136

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 137 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAG 196

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  I  +   G   R        +     P   G 
Sbjct: 197 RYSVGWIDGRLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 256

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 257 TIVY------HTHGALWRMTGLDAEPERL 279



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+    +   +  + +PD +++   S      ++
Sbjct: 351 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISH---DGRI 407

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 408 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 467

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 468 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 526

Query: 442 WVGF 445
              F
Sbjct: 527 -SPF 529



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 371 GTGEIRRIAQG---QIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 420

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 421 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 480

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER--LTNTLFINISAS 308
            F+++GK   +   +  D   D  + DL    T+R  L        S  
Sbjct: 481 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEASPF 529


>gi|295110966|emb|CBL27716.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Synergistetes
           bacterium SGP1]
          Length = 636

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 67/181 (37%), Gaps = 18/181 (9%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G+R   +      M+++  DL S    R+T+    ++   +   + +IV+  DR 
Sbjct: 51  AISPDGRRLAYAKPWKSRMNVFVRDLDSEEERRVTSAEERDVGGFFWKGNDRIVYVQDRG 110

Query: 324 G--KEQLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           G     +Y+    G+  + ++     +     D    P+  LI+  +   E F +     
Sbjct: 111 GDENFHVYITNLEGTASRDLTPFEKVRAGVLDDLEDDPRHMLISMNRRDPEVFDVYRCDL 170

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           D  +   L E+           G  + +    +G       +I+ +G N  L+   +   
Sbjct: 171 DSGELTKLAENP----------GSVVGWMTDHEGRLR---VAIETDGVNTNLLYRTSEDQ 217

Query: 439 D 439
           +
Sbjct: 218 E 218



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 3/89 (3%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPS 400
             +         SP G  +A+ K    +  + V   D  +ER +   E+ ++    W  +
Sbjct: 41  FFRNPESAAYAISPDGRRLAYAKPWKSRMNVFVRDLDSEEERRVTSAEERDVGGFFWKGN 100

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            R +++ + + GD    +Y  +L G    
Sbjct: 101 DR-IVYVQDRGGDENFHVYITNLEGTASR 128


>gi|330836145|ref|YP_004410786.1| hypothetical protein Spico_0166 [Spirochaeta coccoides DSM 17374]
 gi|329748048|gb|AEC01404.1| hypothetical protein Spico_0166 [Spirochaeta coccoides DSM 17374]
          Length = 946

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 80/195 (41%), Gaps = 27/195 (13%)

Query: 266 SSNGKRALISVQKDEAM-------------DIYSVDLQSNATERLTNTLFINISASYSPD 312
           S +G +   S     +              DI   ++  +++  LT+     +  + SPD
Sbjct: 356 SDDGLKVAYSRIHSTSWEYGAIGTAAVSYADIVLYNVDDDSSVWLTSG-GRFLHPALSPD 414

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +++       + +L  +  +G D + +  + E S ++P +SP G  IAF + S    +
Sbjct: 415 GKKLIAIEATGTRYRLVRIPMDGGDGEVLYDNPETSVYEPRFSPDGRSIAFIETSHGLSS 474

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + +M +DG +  +    + ++ P +S    +L+FS   DG     LY  D++       N
Sbjct: 475 LRIMDEDGIRSVVPPGRAEIRYPRFSG-SDTLLFSSDVDGTFA--LYGADISSSK----N 527

Query: 433 TPAY------ASDPQ 441
           T         A DP 
Sbjct: 528 TDGESSILLLARDPS 542



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 59/166 (35%), Gaps = 10/166 (6%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  L  +  DG +   L  + +  ++EPRFSP+ + +A+            L     D 
Sbjct: 426 TRYRLVRIPMDGGDGEVLYDNPETSVYEPRFSPDGRSIAFIETSHG---LSSLRIMDEDG 482

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
               +   R+ I  PRFS      L S   D    +Y  D+ S+     T+     +  +
Sbjct: 483 IRSVVPPGRAEIRYPRFS-GSDTLLFSSDVDGTFALYGADISSSKN---TDGESSILLLA 538

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             P     V  + R+G+  +Y   +      R     E      +W
Sbjct: 539 RDPSG---VLGAIRDGERYIYATATAEGQALRSIPATEVLNEPVIW 581


>gi|307153941|ref|YP_003889325.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306984169|gb|ADN16050.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 1194

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 64/335 (19%), Positives = 111/335 (33%), Gaps = 39/335 (11%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--------S 181
           L +    K+ + K    SP    ++ H + D IY +   E   F      V        S
Sbjct: 535 LIEAIKAKERLQKLGSVSPKLDSQVTHVLRDAIYGA--DEYNRFWGHKAAVLAVAVSPDS 592

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             + S  +  ++ +  RDG  +         I+    FSP+ Q +  +  D+  +L    
Sbjct: 593 SIIASASVDQTVKLWGRDGT-LYASLSGHHAIVRAVNFSPDGQLLV-SGDDNGKMLLWKR 650

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
              R     K I   +  I    +S +GK    S   D+ + ++  D        L  T 
Sbjct: 651 NPDRTYHLFKTIQAHQGGIWGIAWSGDGKTIA-SASFDKTVKLWKRDCS------LVITF 703

Query: 302 FINISASY----SPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVW 354
               S  +    SPD+  +   S DR    +L+   S G   K +              +
Sbjct: 704 AGYRSPFWGVAFSPDNQIVAAASLDR--TVKLWKRDSTGWQAKPLQTLSGHNGWVAGVAF 761

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKK 410
           SP   ++A +    +   +           LL       + +    +SP  R+L  +   
Sbjct: 762 SPDSKMLA-SSSEDKTVKLWQRDDTDKTYHLLKTLSGHTAGIWGVAFSPDRRTLASASL- 819

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
             D   KL+SID  G     +   + +     W  
Sbjct: 820 --DKTIKLWSID--GTELRTLRGHSTSVWGVTWSP 850



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 90/242 (37%), Gaps = 14/242 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ S     ++ +  RD + +      R    +   FSP+ Q VA A+ D    L    
Sbjct: 679 KTIASASFDKTVKLWKRDCSLVITFAGYRSPF-WGVAFSPDNQIVAAASLDRTVKLWKRD 737

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---TERLT 298
                 +  + +      +    FS + K    S  +D+ + ++  D         + L+
Sbjct: 738 STGWQAKPLQTLSGHNGWVAGVAFSPDSKMLA-SSSEDKTVKLWQRDDTDKTYHLLKTLS 796

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                    ++SPD   +   S     + + +   +G++ + + +    S +   WSP G
Sbjct: 797 GHTAGIWGVAFSPDRRTLASASL---DKTIKLWSIDGTELRTL-RGHSTSVWGVTWSPDG 852

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             IA +  +     +    ++  Q+ ++   +   +   SP    ++    ++    +KL
Sbjct: 853 SFIA-SAGTENLVKLW-QSENPFQKTMVAHQAGTWSVAISPDSSMIVTLSHEN---TTKL 907

Query: 419 YS 420
           +S
Sbjct: 908 WS 909



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 76/241 (31%), Gaps = 17/241 (7%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS- 192
            D K I    F  +   W++        +  +  G +  F          +V+    +  
Sbjct: 676 GDGKTIASASFDKTVKLWKRDC-----SLVITFAGYRSPFWGVAFSPDNQIVAAASLDRT 730

Query: 193 --LCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             L   D  G   + L      +  +    FSP+ + +A ++ D    L       +   
Sbjct: 731 VKLWKRDSTGWQAKPLQTLSGHNGWVAGVAFSPDSKMLASSSEDKTVKLWQRDDTDKTYH 790

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K +    + I    FS + +    S   D+ + ++S+D        L          +
Sbjct: 791 LLKTLSGHTAGIWGVAFSPDRRTLA-SASLDKTIKLWSID--GTELRTLRGHSTSVWGVT 847

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD S I       G E L  +  + +  ++     +A  +    SP   +I       
Sbjct: 848 WSPDGSFIA----SAGTENLVKLWQSENPFQKTMVAHQAGTWSVAISPDSSMIVTLSHEN 903

Query: 369 E 369
            
Sbjct: 904 T 904



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 59/164 (35%), Gaps = 12/164 (7%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            +       +++ +FSP+ + +A A+ D    L      TR  +  + +    S +    F
Sbjct: 1001 ILRGHQAEIWQLKFSPDSRLLASASSDGTAKLW-----TREGKLFRTLAGHTSAVWGVAF 1055

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S +G+    +   D  + ++  +L+    +             +SPD   I   S     
Sbjct: 1056 SRDGQMIA-TGSGDNRVKLW--NLEGKLLKTFIGHQAAVWGVDFSPDGKIIASGSV---D 1109

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
              + + + +G++   +S    A+      SP G  +A       
Sbjct: 1110 TTIKLWKPDGTELTTLS-GHTAAVRAIAISPDGAFLASVGDDNS 1152



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 89/260 (34%), Gaps = 18/260 (6%)

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            +  + G ++  I   S  +V+   +N+  +  R G  ++     R  I     F+   + 
Sbjct: 878  VAHQAGTWSVAISPDSSMIVTLSHENTTKLWSRSGQLLKTFPSLRATI-SGISFTEESRV 936

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +A+A  D+     VY        A     +    +L    S + K    +   +  + + 
Sbjct: 937  IAFADEDN----TVYFWQPDGTSAAT-YQDPNKNLLTVALSPDQKTLA-TAYLNRTIQLR 990

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
              +   +  + L           +SPDS  +   S  +G  +L+  +       R     
Sbjct: 991  QGNFSRSKPKILRGHQAEIWQLKFSPDSRLLASASS-DGTAKLWTRE---GKLFRTLAGH 1046

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSL 404
             ++ +   +S  G +IA          + +   +G   +  +   + +    +SP G+ +
Sbjct: 1047 TSAVWGVAFSRDGQMIATGSGDN---RVKLWNLEGKLLKTFIGHQAAVWGVDFSPDGKII 1103

Query: 405  IFSRKKDGDTGSKLYSIDLN 424
                    DT  KL+  D  
Sbjct: 1104 A---SGSVDTTIKLWKPDGT 1120


>gi|78046788|ref|YP_362963.1| putative dipeptidyl peptidase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78035218|emb|CAJ22863.1| putative dipeptidyl peptidase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 706

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 82/274 (29%), Gaps = 51/274 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   V +A    +         L V  + TR    PKR+      + +P  S
Sbjct: 36  VSSPTLSPDGSVVLFAKRQAKTANGKPATSLWVRNLRTRDLAPPKRLTPEGWNVNSPALS 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y+  +     ++LT       S   SPD  +I F +   G  
Sbjct: 96  PDGKTVYFLSSKSGSQQLYAQPMAGGTPQQLTAFAVDVDSYKLSPDGKRIAFSA---GVF 152

Query: 327 QLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           Q                  +    +  D+        W+       F        A  V+
Sbjct: 153 QDCGSDLGCTKKKLGELKNNKASGVVYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVV 212

Query: 377 KKDGSQERLLVED-----SNLQAPTWSPSGRSLIFS-----------------------R 408
                   L  +            TWSP G S++ S                        
Sbjct: 213 GASAISATLAGDAPSKPFGGNDDYTWSPDGSSVVASVRIPQPHGPEASKNAKASGKPTGN 272

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +   T   LY +D  G++  +  T   A++P W
Sbjct: 273 DEPWQTNFDLYRLDATGKSAPVNLT---AANPAW 303



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 88/312 (28%), Gaps = 69/312 (22%)

Query: 183 SVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +G    SL V +   RD A  + LTP    +   P  SP+ + V + +   +   + 
Sbjct: 56  KTANGKPATSLWVRNLRTRDLAPPKRLTPEGWNVN-SPALSPDGKTVYFLS--SKSGSQQ 112

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                     P+++  F   + + + S +GKR   S            DL     ++L  
Sbjct: 113 LYAQPMAGGTPQQLTAFAVDVDSYKLSPDGKRIAFSA---GVFQDCGSDL-GCTKKKLGE 168

Query: 300 TLFINISA------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE- 346
                 S             +++      +F ++             G+     +   + 
Sbjct: 169 LKNNKASGVVYDQLFVRHWDTWNDGRRNTLFVAE---LPAAGAKAVVGASAISATLAGDA 225

Query: 347 -----ASYFDPVWSPQGDLIAFTKFSG-------------------------EKFAIGVM 376
                    D  WSP G  +  +                               F +  +
Sbjct: 226 PSKPFGGNDDYTWSPDGSSVVASVRIPQPHGPEASKNAKASGKPTGNDEPWQTNFDLYRL 285

Query: 377 KKDG-SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETL 430
              G S    L     +    P +S  G++L +   K     +    L ++D+       
Sbjct: 286 DATGKSAPVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVASGKTRE 345

Query: 431 INTPAYASDPQW 442
           I        P+W
Sbjct: 346 IA-------PKW 350



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 58/167 (34%), Gaps = 19/167 (11%)

Query: 188 IIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                L  +D  G +    LT +       P FS + + + Y                R 
Sbjct: 277 QTNFDLYRLDATGKSAPVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGF-----EADRF 331

Query: 247 DRAPKRIGNFRSMILAPRF---------SSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                 + + ++  +AP++         S +G     S  +     ++ +D+ S    +L
Sbjct: 332 GLMAMDVASGKTREIAPKWDRSAGEIVLSEDGASLYTSADELGEHPLFKIDIASGEATKL 391

Query: 298 TNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQ 343
                ++   + +   + + F  S  +  +Q++V  + G   + ISQ
Sbjct: 392 VGEGSVHA-PTLA--GNTLAFTRSSLKSGDQIFVSDTQGQGLRAISQ 435


>gi|145506384|ref|XP_001439154.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124406335|emb|CAK71757.1| unnamed protein product [Paramecium tetraurelia]
          Length = 512

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 89/245 (36%), Gaps = 23/245 (9%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ SG   NS+ + D      +         +    FSP+   +A  + D      + L 
Sbjct: 193 TLASGSADNSIRLWDVKTGQQKAKLDGHSDYVMSVNFSPDGTTLASGSIDR----SIRLW 248

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---N 299
           D +  +    +  + S + +  FS +G     S  KD ++ ++  D+++  ++  T   +
Sbjct: 249 DIKKGQQIAILHRYISEVTSVCFSPDGTTLA-SGYKDMSIRLF--DVKTGYSK--TKDDH 303

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S  +S D + I   S     + + +        K       +      +SP G 
Sbjct: 304 HFGSVCSVCFSTDGTTIASGSS---DKSICLWDVKTGQLKAKLDGHTSKVMSVCFSPDGT 360

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSK 417
            +A          I +   +  QE++ ++    +  +  +SP G +L        D   +
Sbjct: 361 TLASGSSDKS---IRLWDVEKRQEKVKLDGHTSEVMSVCFSPDGTTLASGSI---DRSIR 414

Query: 418 LYSID 422
           L+ ++
Sbjct: 415 LWDVN 419



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 84/227 (37%), Gaps = 20/227 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+   +A  + D+     + + D +  +   ++G   S +++  FS
Sbjct: 8   LDGHLSFVNSVNFSPDGTTLASGSRDN----SIRVWDAKTGQQKAKLGCHSSTVISVNFS 63

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGK 325
            +G     S   + ++ ++  D+++   + +L +     +S  +SPD + +   S     
Sbjct: 64  PDGTTLA-SGSLNNSISLW--DVKTGQEKVKLDSHTRGVMSVCFSPDGTTLASGSQ---D 117

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +   N   Q+       +      +SP    +A    SG   +I +      Q+  
Sbjct: 118 NSICLWDVNTQQQQAKFNGHSSCIRSVSFSPNLTTLA----SGGDTSICLWNAQTGQQIA 173

Query: 386 LVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            ++    +  +  +SP G +L        D   +L+ +    +   L
Sbjct: 174 KLDGHIREVMSVCFSPDGTTLA---SGSADNSIRLWDVKTGQQKAKL 217



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/292 (16%), Positives = 89/292 (30%), Gaps = 40/292 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       R+WD K  +Q                 H  S  +        G     
Sbjct: 25  TTLASGSRDNSIRVWDAKTGQQKAKLG-----------CH--SSTVISVNFSPDG----- 66

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG + NS+ + D      +    S  + +    FSP+   +A  + D+   
Sbjct: 67  -----TTLASGSLNNSISLWDVKTGQEKVKLDSHTRGVMSVCFSPDGTTLASGSQDN--- 118

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L D    +   +     S I +  FS N    L ++       I   + Q+     
Sbjct: 119 -SICLWDVNTQQQQAKFNGHSSCIRSVSFSPN----LTTLASGGDTSICLWNAQTGQQIA 173

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +L   +   +S  +SPD + +   S       + +       QK              +S
Sbjct: 174 KLDGHIREVMSVCFSPDGTTLASGS---ADNSIRLWDVKTGQQKAKLDGHSDYVMSVNFS 230

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
           P G  +A          I +      Q+  ++    S + +  +SP G +L 
Sbjct: 231 PDGTTLASGSIDRS---IRLWDIKKGQQIAILHRYISEVTSVCFSPDGTTLA 279



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 65/177 (36%), Gaps = 16/177 (9%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
             +   ++    S + +  FS +G     S  +D ++ ++  D ++   + +L       
Sbjct: 1   TGQTKAKLDGHLSFVNSVNFSPDGTTLA-SGSRDNSIRVW--DAKTGQQKAKLGCHSSTV 57

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           IS ++SPD + +   S       + +       +K              +SP G  +A  
Sbjct: 58  ISVNFSPDGTTLASGSL---NNSISLWDVKTGQEKVKLDSHTRGVMSVCFSPDGTTLASG 114

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                   I +   +  Q++      +  +++ ++SP+  +L       GDT   L+
Sbjct: 115 SQDNS---ICLWDVNTQQQQAKFNGHSSCIRSVSFSPNLTTLA----SGGDTSICLW 164



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 54/172 (31%), Gaps = 28/172 (16%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                    +  RL+DVK         +  +        H     +        G     
Sbjct: 276 TTLASGYKDMSIRLFDVKTG-------YSKTKDD-----HHFGS-VCSVCFSTDG----- 317

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG    S+C+ D     ++         +    FSP+   +A  + D    
Sbjct: 318 -----TTIASGSSDKSICLWDVKTGQLKAKLDGHTSKVMSVCFSPDGTTLASGSSDK--- 369

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + L D    +   ++    S +++  FS +G     S   D ++ ++ V+
Sbjct: 370 -SIRLWDVEKRQEKVKLDGHTSEVMSVCFSPDGTTLA-SGSIDRSIRLWDVN 419


>gi|262197673|ref|YP_003268882.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haliangium ochraceum DSM 14365]
 gi|262081020|gb|ACY16989.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haliangium ochraceum DSM 14365]
          Length = 657

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 98/274 (35%), Gaps = 17/274 (6%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +  F     F+  +   G   + L V + DG+ ++ LTP          +S + +   + 
Sbjct: 119 RSYFPGDDRFLFSADQGGNELDHLYVKELDGS-VKDLTPGEGLKAAFFDWSGD-KSHFFV 176

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQK-DEAMDIYSV 287
             ++ D   + +   R     + +    +   +P   S +G+   +     +  +D+Y  
Sbjct: 177 LTNERDPQAMDVYRYRTSDYQRSLVFKNTGGFSPEVISPDGRYLALDKSVSNSDVDLYLY 236

Query: 288 DLQS--NATERLTNTL--FINISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRIS 342
           D ++   A  R+TN      N++ S+S D  ++ + +DR G+  Q +       +   + 
Sbjct: 237 DAKAPRKAPRRITNESEAAENVAQSFSRDGKRLYYTTDRHGEFRQAWYYDLA-KNSHAVE 295

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAPTWS 398
              +       +S  G           +  + +   D S    L        ++   ++S
Sbjct: 296 LRADWDVSYLGFSDGGRYRVIATNEDARTRLQIY--DTSARAPLTMPELPAGDITGVSFS 353

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            S   + F    D  T   LY  D+  +    ++
Sbjct: 354 SSETKMAFYLSSD-TTPRNLYVFDIAAQEVRALS 386



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 70/186 (37%), Gaps = 8/186 (4%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE 319
               FS +  R L++  +    ++Y+  +        T++   +  A SY P   + +F 
Sbjct: 72  FGGSFSHDETRVLVTSNESGVFNVYAQPVAGGEAVAQTDSQTESHFARSYFPGDDRFLFS 131

Query: 320 SDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAIGV 375
           +D+ G   + LYV + +GS  K ++  +        WS       +   +   +   +  
Sbjct: 132 ADQGGNELDHLYVKELDGS-VKDLTPGEGLKAAFFDWSGDKSHFFVLTNERDPQAMDVYR 190

Query: 376 MKKDGSQERLLVEDSNLQAP-TWSPSGRSLIF-SRKKDGDTGSKLYSIDLNGRNETLINT 433
            +    Q  L+ +++   +P   SP GR L       + D    LY      +    I  
Sbjct: 191 YRTSDYQRSLVFKNTGGFSPEVISPDGRYLALDKSVSNSDVDLYLYDAKAPRKAPRRITN 250

Query: 434 PAYASD 439
            + A++
Sbjct: 251 ESEAAE 256


>gi|257070191|ref|YP_003156446.1| Tol biopolymer transporter periplasmic component-related protein
           [Brachybacterium faecium DSM 4810]
 gi|256561009|gb|ACU86856.1| Tol biopolymer transport system, periplasmic component-related
           protein [Brachybacterium faecium DSM 4810]
          Length = 1186

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 69/197 (35%), Gaps = 26/197 (13%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G     +   D    ++   L      RLT+         +SPD   I + S   G
Sbjct: 14  PDVRGDLLTFTAAND----VWLAPLAGGRAWRLTDEGAPVAYPRFSPDGEHIAYTSRTSG 69

Query: 325 KEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMKKDG 380
             +++V  + G +  +R++     +     W P G ++A T +         +  +  +G
Sbjct: 70  GPEVWVTAAEGDTAPRRLTAWGRPATKVVGWLPDGRIVASTSYGAPIARDAQLWAIDLEG 129

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFS---------RKKDGDTGSKLYSIDLNGRNETLI 431
             E  L+            SG +++ +         +   G T  KL+      R +  +
Sbjct: 130 --ETELLPLGRSGEVAIHSSGTTVVSTPWRRDQASWKHYQGGTAVKLWI----SRQDVPL 183

Query: 432 NTPAYA-SDPQWVGFMD 447
           + P  A +D  W   +D
Sbjct: 184 DAPTAAHADRAWEPLLD 200



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/300 (16%), Positives = 99/300 (33%), Gaps = 66/300 (22%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N + +    G    +        +  PRFSP+ + +AY +        V++     D AP
Sbjct: 27  NDVWLAPLAGGRA-WRLTDEGAPVAYPRFSPDGEHIAYTSRTSGGP-EVWVTAAEGDTAP 84

Query: 251 KRIG-NFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTNTLFINIS 306
           +R+    R       +  +G+    +           ++++DL+   TE L       + 
Sbjct: 85  RRLTAWGRPATKVVGWLPDGRIVASTSYGAPIARDAQLWAIDLE-GETELLPLGRSGEV- 142

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--------ASYFDPVWSP-- 356
            +     + +V  S    ++Q       G    ++   ++        A++ D  W P  
Sbjct: 143 -AIHSSGTTVV--STPWRRDQASWKHYQGGTAVKLWISRQDVPLDAPTAAHADRAWEPLL 199

Query: 357 ------------QGDLIAFTKFSGE---------KFAIGVMKKDGSQERLLVE----DSN 391
                        GD + F   +              +  +  DGS  R           
Sbjct: 200 DEILASKLRIAWYGDRLLFASDTPGPGAALTDRASANLWSIALDGSDLRAHTSFSSAQGY 259

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID------------LNGRNETLINTPAYASD 439
           L+ P  +  G +++FS +       +L+++D             +G   + +  PA AS+
Sbjct: 260 LREP--ATDGSTIVFSSR------GRLFAMDSLDAEPREIEILASGVGASRLPRPASASE 311



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 96/257 (37%), Gaps = 28/257 (10%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
             + +  F   +++ +++   +D   +G+ VL   R+   G+     E RL DV D  +I
Sbjct: 358 RPLGRTPFALFVSDAEALRDRED-GGVGSDVLALARLDGGGE-----EIRL-DVGDVGRI 410

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
           +            KIA +  D++ + +T  +G  +                 S    D +
Sbjct: 411 L---HAIPSPDGAKIAISTHDNVVRLVTL-RGLEDPARSSAPGPRTGAAAAASAWEQDAE 466

Query: 200 GA-------NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR-IDRAPK 251
            A       ++R +  S    + +  +SP+ + + +A  +   + R+ L DT   +   +
Sbjct: 467 HAVPAPQLDHVREVGRSTGGEVRDLAWSPDGRWLVWAEPNSWQLSRLMLSDTEDAEPTGR 526

Query: 252 RIGNFRSMILAPRFSSNGKRALI-------SVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            + + +    AP FS++GK   +       +V  D   D+  V+ +      L  T    
Sbjct: 527 ALTSGKFQDSAPAFSADGKHLALLSLRTFETVYDDMVFDLGFVNAERPFLLPLERTTPDP 586

Query: 305 ISASYSPDSSQIVFESD 321
                 PD      E D
Sbjct: 587 FGPH--PDGWGAAAEKD 601



 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 57/188 (30%), Gaps = 30/188 (15%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-----YSPDSSQIVFES 320
           S +G +  IS   +    +  V L+       ++       A+     +  D+   V   
Sbjct: 416 SPDGAKIAISTHDN---VVRLVTLRGLEDPARSSAPGPRTGAAAAASAWEQDAEHAV--- 469

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                 QL          + + +       D  WSP G  + + + +  + +  +M  D 
Sbjct: 470 ---PAPQL-------DHVREVGRSTGGEVRDLAWSPDGRWLVWAEPNSWQLS-RLMLSDT 518

Query: 381 SQE----RLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLIN 432
                  R L        AP +S  G+ L     +  +T       DL   N     L+ 
Sbjct: 519 EDAEPTGRALTSGKFQDSAPAFSADGKHLALLSLRTFETVYDDMVFDLGFVNAERPFLLP 578

Query: 433 TPAYASDP 440
                 DP
Sbjct: 579 LERTTPDP 586



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 56/187 (29%), Gaps = 36/187 (19%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF-SPNQQKVAYATY 231
           F S    + +    G+  + L +   DG          D         SP+  K+A +T+
Sbjct: 368 FVSDAEALRDREDGGVGSDVLALARLDGGGEEIRLDVGDVGRILHAIPSPDGAKIAISTH 427

Query: 232 DD----------EDILRVYLMDTRID---------------------RAPKRIG-NFRSM 259
           D+          ED  R      R                          + +G +    
Sbjct: 428 DNVVRLVTLRGLEDPARSSAPGPRTGAAAAASAWEQDAEHAVPAPQLDHVREVGRSTGGE 487

Query: 260 ILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQI 316
           +    +S +G+  + +     +   +   D +        LT+  F + + ++S D   +
Sbjct: 488 VRDLAWSPDGRWLVWAEPNSWQLSRLMLSDTEDAEPTGRALTSGKFQDSAPAFSADGKHL 547

Query: 317 VFESDRE 323
              S R 
Sbjct: 548 ALLSLRT 554


>gi|332661782|ref|YP_004451252.1| (myosin heavy-chain) kinase [Haliscomenobacter hydrossis DSM 1100]
 gi|332337279|gb|AEE54379.1| (Myosin heavy-chain) kinase [Haliscomenobacter hydrossis DSM 1100]
          Length = 1467

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 70/216 (32%), Gaps = 15/216 (6%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                  +    +SP+ +K+   ++D      V           + +      + +  +S 
Sbjct: 820  QGHSAEVSSICYSPDGKKILSGSFDK----TVKEWSVESGECLQTLHGHSGFVNSVSYSP 875

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            +GK+ L S   D  +  + V       + L        S  YS D  +I+  SD    + 
Sbjct: 876  DGKKIL-SGSDDRMVKEWLVS-SGECLQTLKEHDNSVSSVCYSVDGKKILSGSD---DKT 930

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            +           +  Q         ++SP G  I             V    G   R L 
Sbjct: 931  VKEWSVESGKCLQTLQGHGNRVISVIYSPDGKKILSGSVDRTVKEWLV--SSGECLRTLQ 988

Query: 388  -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              DS + +  +SP G+ ++      GD   K + +D
Sbjct: 989  GHDSWVMSVCYSPDGKKIL---SGSGDKTVKEWLVD 1021



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/272 (16%), Positives = 92/272 (33%), Gaps = 15/272 (5%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSL 193
            D K+I+   F  +   W       S +  Q++ G  G  NS       + ++SG     +
Sbjct: 834  DGKKILSGSFDKTVKEWSVE----SGECLQTLHGHSGFVNSVSYSPDGKKILSGSDDRMV 889

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
                             D  +    +S + +K+   + D      V        +  + +
Sbjct: 890  KEWLVSSGECLQTLKEHDNSVSSVCYSVDGKKILSGSDDK----TVKEWSVESGKCLQTL 945

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                + +++  +S +GK+ L S   D  +  + V         L       +S  YSPD 
Sbjct: 946  QGHGNRVISVIYSPDGKKIL-SGSVDRTVKEWLVS-SGECLRTLQGHDSWVMSVCYSPDG 1003

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +I+  S   G + +     +  +  R  Q  +       +SP G  I            
Sbjct: 1004 KKILSGS---GDKTVKEWLVDSGECLRTLQGHDNWVMSVCYSPDGKKILSGSRDKTIKEW 1060

Query: 374  GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             V+  +  +         + + ++SP+G+ ++
Sbjct: 1061 SVLSMECLK-TFKGHSEWVMSVSYSPNGKKIL 1091



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 70/201 (34%), Gaps = 13/201 (6%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                  +    +SP+  K+   + D      +           + +    + +    +S 
Sbjct: 1198 NGHSSSVKSVCYSPDGNKILSGSNDK----TIKEWLVESGECLQTLQGHFAGVSCVSYSP 1253

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            NGK+ L S   D  +  +SVD        L       +S SY P+  +I+  S R+ K +
Sbjct: 1254 NGKKIL-SGSNDGIIKEWSVD-SGECLLSLVGHNNRVLSVSYYPNGEKIL-SSSRDSKVK 1310

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL- 386
             +++    S +   +    +S     +SP G  I             V    G    +L 
Sbjct: 1311 EWLV---TSGECLKTLIGHSSSSGVCYSPDGKRILSCSVDNTIKEWSV--ASGEYLPILQ 1365

Query: 387  VEDSNLQAPTWSPSGRSLIFS 407
               + +    +SP G+ ++ S
Sbjct: 1366 TNTNEVMNVCYSPDGKKILLS 1386



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 72/190 (37%), Gaps = 13/190 (6%)

Query: 222 NQQKVAY-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           + QK+ +     +     + L+V L D+ I           + + +  +S +GK+ L S 
Sbjct: 783 DLQKIYFNGIPLSAQRQYNYLKVQLNDSLIKGNLLFAQGHSAEVSSICYSPDGKKIL-SG 841

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D+ +  +SV+      + L        S SYSPD  +I+  SD      +     +  
Sbjct: 842 SFDKTVKEWSVE-SGECLQTLHGHSGFVNSVSYSPDGKKILSGSD---DRMVKEWLVSSG 897

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAP 395
           +  +  ++ + S     +S  G  I             V  + G   + L    N + + 
Sbjct: 898 ECLQTLKEHDNSVSSVCYSVDGKKILSGSDDKTVKEWSV--ESGKCLQTLQGHGNRVISV 955

Query: 396 TWSPSGRSLI 405
            +SP G+ ++
Sbjct: 956 IYSPDGKKIL 965



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 83/278 (29%), Gaps = 53/278 (19%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++     D           D  +    +SP+ +K+   + D      +      
Sbjct: 1008 SGSGDKTVKEWLVDSGECLRTLQGHDNWVMSVCYSPDGKKILSGSRDK----TIKEWSVL 1063

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRAL-------------------------------- 273
                 K        +++  +S NGK+ L                                
Sbjct: 1064 SMECLKTFKGHSEWVMSVSYSPNGKKILSGSADLTIKELMVASGECLNTLQKKVSFVISS 1123

Query: 274  ---------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
                     IS   D+ +  +SV       + L        S  YS D  +I+  SD   
Sbjct: 1124 CYSSDGNKIISTSMDDTLKEWSVS-SGKCLQTLKGHSDWISSVCYSSDGKKILSGSD--- 1179

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
               +        +  +      +S     +SP G+ I  +  + +     +++     + 
Sbjct: 1180 DCIVKEWSVASGECLKNINGHSSSVKSVCYSPDGNKIL-SGSNDKTIKEWLVESGECLQT 1238

Query: 385  LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            L    + +   ++SP+G+ ++       D   K +S+D
Sbjct: 1239 LQGHFAGVSCVSYSPNGKKIL---SGSNDGIIKEWSVD 1273


>gi|269796026|ref|YP_003315481.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Sanguibacter
           keddieii DSM 10542]
 gi|269098211|gb|ACZ22647.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Sanguibacter
           keddieii DSM 10542]
          Length = 681

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 79/240 (32%), Gaps = 18/240 (7%)

Query: 217 PRFSPNQQ-----KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  SP+       ++A     DE   +V+ +      AP R+         P+ S +G+ 
Sbjct: 15  PSLSPDGTFAVVARIAPDLETDEYTGQVWRVSVEGSTAPVRLTRGHR-DTDPQVSPDGRW 73

Query: 272 ALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                 +      ++ V+       RLT+      +  +SPD S + F +    + +  V
Sbjct: 74  VAFLRAEPKGRPQVHLVEAVGGEPVRLTDAPLGAQAPQFSPDGSSLAFLARVPDEGRYVV 133

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDGSQERLL 386
             +  +++ R   +    +    ++       F             +      GS  R +
Sbjct: 134 DGNPAAERPRHITELTYRHDGVGFTHDKRRQLFVVDVPADPEARSLVAEDGTSGSVARQV 193

Query: 387 VE-DSNLQAPTWSPSGRSLIFSRKKDG----DTGSKLYSID--LNGRNETLINTPAYASD 439
              D +L +  W   GR ++    +      D  S +  ID   +G       T A A  
Sbjct: 194 TSGDVDLSSALWLSDGRHVVVVAARHAGRHQDRRSDVVVIDTAADGDGALHPLTDADAGS 253



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 60/131 (45%), Gaps = 11/131 (8%)

Query: 262 APRFSSNGKRALISVQKDE------AMDIYSVDLQSN-ATERLTNTLFINISASYSPDSS 314
           AP  S +G  A+++    +         ++ V ++ + A  RLT     +     SPD  
Sbjct: 14  APSLSPDGTFAVVARIAPDLETDEYTGQVWRVSVEGSTAPVRLTRG-HRDTDPQVSPDGR 72

Query: 315 QIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            + F  ++ +G+ Q++++++ G +  R++     +   P +SP G  +AF     ++   
Sbjct: 73  WVAFLRAEPKGRPQVHLVEAVGGEPVRLTDAPLGAQ-APQFSPDGSSLAFLARVPDEGR- 130

Query: 374 GVMKKDGSQER 384
            V+  + + ER
Sbjct: 131 YVVDGNPAAER 141



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 88/266 (33%), Gaps = 23/266 (8%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G F   +  ++  + +      +  +  +G+        R     +P+ SP+ + VA
Sbjct: 18  SPDGTFA-VVARIAPDLETDEYTGQVWRVSVEGSTAPVRLT-RGHRDTDPQVSPDGRWVA 75

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYS 286
           +   + +   +V+L++  +   P R+ +      AP+FS +G      +   DE   +  
Sbjct: 76  FLRAEPKGRPQVHLVE-AVGGEPVRLTDAPLGAQAPQFSPDGSSLAFLARVPDEGRYVVD 134

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQ 343
            +  +     +T   + +    ++ D  + +F  D     +   L           R   
Sbjct: 135 GNPAAERPRHITELTYRHDGVGFTHDKRRQLFVVDVPADPEARSLVAEDGTSGSVARQVT 194

Query: 344 DKEASYFDPVWSPQGDLIAFT------KFSGEKFAIGVMK--KDGSQERLLVEDSNLQAP 395
             +      +W   G  +         +    +  + V+    DG      + D++    
Sbjct: 195 SGDVDLSSALWLSDGRHVVVVAARHAGRHQDRRSDVVVIDTAADGDGALHPLTDADA--- 251

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSI 421
                G +L  +       G+ L+ +
Sbjct: 252 -----GSTLAVAAAVPTSDGAGLWVL 272



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 31/102 (30%), Gaps = 7/102 (6%)

Query: 350 FDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGR 402
             P  SP G      + + +         +  +  +GS     L        P  SP GR
Sbjct: 13  GAPSLSPDGTFAVVARIAPDLETDEYTGQVWRVSVEGSTAPVRLTRGHRDTDPQVSPDGR 72

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            + F R +            + G    L + P  A  PQ+  
Sbjct: 73  WVAFLRAEPKGRPQVHLVEAVGGEPVRLTDAPLGAQAPQFSP 114


>gi|124009069|ref|ZP_01693753.1| hypothetical protein M23134_02774 [Microscilla marina ATCC 23134]
 gi|123985389|gb|EAY25304.1| hypothetical protein M23134_02774 [Microscilla marina ATCC 23134]
          Length = 986

 Score = 75.1 bits (183), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 80/224 (35%), Gaps = 15/224 (6%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA------TYDDEDILRVYLMDT 244
            +   +  DG   + LT S          S N  K+ +A       +  ++   + L D 
Sbjct: 333 KTYYKILPDGT-EKRLTLSGINFDVNTSLSVNGGKMCWAEMGYHARWGLKNYSVIKLYDL 391

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRA-LISVQKDEAMDIYSVDLQSNATERLTN-TLF 302
           +  R  K+    RS   AP  S +G +   + +  +    +  +D +    ++L N   +
Sbjct: 392 KTQR--KKKITHRSRYFAPALSPDGSKIIAVEISPNLTYSLVVLDTEGKVLKKLANPHNY 449

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 ++ D+  IV    ++ + QL  + +N      ++         P    QGD + 
Sbjct: 450 FYSFPRWA-DNHHIVVVRQQKEQNQLQRINTNSGQTTALTNPTSVLIAYPY--AQGDYVF 506

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
           F         I V+K+   Q   +         P  SP G++L 
Sbjct: 507 FMGAYTGINNIFVVKQGSRQVYQVSSVKQGAFYPHVSPDGKTLY 550



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 71/189 (37%), Gaps = 3/189 (1%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           KN   +   D    R    +     F P  SP+  K+            + ++DT     
Sbjct: 381 KNYSVIKLYDLKTQRKKKITHRSRYFAPALSPDGSKIIAVEISPNLTYSLVVLDTEGKVL 440

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K           PR++ +    ++  Q+ E   +  ++  S  T  LTN   + I+  Y
Sbjct: 441 KKLANPHNYFYSFPRWA-DNHHIVVVRQQKEQNQLQRINTNSGQTTALTNPTSVLIAYPY 499

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +     + F     G   ++V++       ++S  K+ +++ P  SP G  +  ++FS +
Sbjct: 500 A-QGDYVFFMGAYTGINNIFVVKQGSRQVYQVSSVKQGAFY-PHVSPDGKTLYMSEFSPK 557

Query: 370 KFAIGVMKK 378
            + +  M  
Sbjct: 558 GYNVSKMPL 566



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 42/260 (16%), Positives = 89/260 (34%), Gaps = 34/260 (13%)

Query: 128 FRLWDVKDR--KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
            +L+D+K +  K+I  +  + +PA     +  I+ +I  ++T                  
Sbjct: 386 IKLYDLKTQRKKKITHRSRYFAPALSPDGSKIIAVEISPNLT------------------ 427

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                 SL V+D +G  ++ L    +     PR++ N   V      +++ L+    +  
Sbjct: 428 -----YSLVVLDTEGKVLKKLANPHNYFYSFPRWADNHHIVVVRQQKEQNQLQRINTN-- 480

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  + N  S+++A  ++  G             +I+ V   S    ++++      
Sbjct: 481 -SGQTTALTNPTSVLIAYPYA-QGDYVFFMGAYTGINNIFVVKQGSRQVYQVSSVKQGAF 538

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLI 361
               SPD   +           +  M    +D K +    +      ++  +   +G  I
Sbjct: 539 YPHVSPDGKTLYMSEFSPKGYNVSKMPLKPADWKVVQNTQTLTGGTDFYKTISEQEGGSI 598

Query: 362 AFTKFSGEKFAIGVMKKDGS 381
            F K   EKF +    K   
Sbjct: 599 -FDKVGEEKFKVKKYNKWTG 617


>gi|332526849|ref|ZP_08402945.1| hypothetical protein RBXJA2T_13159 [Rubrivivax benzoatilyticus JA2]
 gi|332111294|gb|EGJ11278.1| hypothetical protein RBXJA2T_13159 [Rubrivivax benzoatilyticus JA2]
          Length = 662

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 96/257 (37%), Gaps = 31/257 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           + P ++++      + D             A +R+      +    +    G+  + +  
Sbjct: 63  WHPTRREMLVLHRAETDATAQLWRAAAPGAALERLTAEPDPVAEASWEPREGRYIVFARG 122

Query: 278 KDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DR--EGKEQ--- 327
           +       +Y +D  +     LT+    +    +   +S++V+ +   DR  +G ++   
Sbjct: 123 RGGNEATQLYRLDPATRQATLLTDPDQRHDPIGWLHGASKLVYGAVPLDRTADGGKRAAI 182

Query: 328 ---LYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQ 382
              L++M   +   +++I+    A +F    S     +A T++ S  +    ++     +
Sbjct: 183 DTTLWLMDPLSPEGRRQIAVLPGAGWFGGAISHDDRTLAITRYVSATESEAWLVDLASGE 242

Query: 383 ERLL------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL----- 430
            R +         ++     + P G  L+F   + G+   +L  + L +GR   L     
Sbjct: 243 RRRVLPAPGETLKASHFPVAFRPDGSGLLFLSDRAGEF-RELMLLSLADGRITRLTSQIP 301

Query: 431 --INTPAYASDPQWVGF 445
             ++  A + D +W+ F
Sbjct: 302 WDVSGVAPSEDGRWIAF 318



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 57/389 (14%), Positives = 118/389 (30%), Gaps = 47/389 (12%)

Query: 56  VSIDELGGKVSEVVS--KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL--GA--- 108
             I  +   ++E V    D +     +          +   ++    Q W +   GA   
Sbjct: 36  QGIPPIPQSLAERVQRYNDFRGHGFADWHPTRREMLVLHRAETDATAQLWRAAAPGAALE 95

Query: 109 ------QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI 162
                   +         + R  V  R            + +   PA+ +    T  D  
Sbjct: 96  RLTAEPDPVAEASWEPR-EGRYIVFAR----GRGGNEATQLYRLDPATRQATLLTDPDQR 150

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKN-----SLCVMDR---DGANIRYLTPSRDQIL 214
           +  I    G        V     +   K      +L +MD    +G     + P      
Sbjct: 151 HDPIGWLHGASKLVYGAVPLDRTADGGKRAAIDTTLWLMDPLSPEGRRQIAVLPGAGW-- 208

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGK 270
           F    S + + +A   Y        +L+D       + +       ++      F  +G 
Sbjct: 209 FGGAISHDDRTLAITRYVSATESEAWLVDLASGERRRVLPAPGETLKASHFPVAFRPDGS 268

Query: 271 RALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQL 328
             L  S +  E  ++  + L      RLT+ +  ++S  + S D   I F+++ EG+++L
Sbjct: 269 GLLFLSDRAGEFRELMLLSLADGRITRLTSQIPWDVSGVAPSEDGRWIAFQANVEGRDEL 328

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV 387
            ++      +  +      S     +  +GD +AF+  S      +  ++  G       
Sbjct: 329 RLLDGRTLKELALPPLPAGSIGSAAFDRRGDELAFSTNSAQGPSRLHSLRLAGGAVADWT 388

Query: 388 ED-----------SNLQAPTWSP-SGRSL 404
                           +   W+   GR++
Sbjct: 389 TPHVPPGLDVSRFGEAEIVRWTSFDGRTI 417



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 4/102 (3%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSP 399
            +    +    W P    +       +     +      G+    L  + + +   +W P
Sbjct: 52  YNDFRGHGFADWHPTRREMLVLHRAETDATAQLWRAAAPGAALERLTAEPDPVAEASWEP 111

Query: 400 -SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             GR ++F+R + G+  ++LY +D   R  TL+  P    DP
Sbjct: 112 REGRYIVFARGRGGNEATQLYRLDPATRQATLLTDPDQRHDP 153


>gi|329891010|ref|ZP_08269353.1| prolyl oligopeptidase family protein [Brevundimonas diminuta ATCC
           11568]
 gi|328846311|gb|EGF95875.1| prolyl oligopeptidase family protein [Brevundimonas diminuta ATCC
           11568]
          Length = 706

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 78/235 (33%), Gaps = 31/235 (13%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +E   +G + + + V   D  N           LF      + Q              V+
Sbjct: 189 AERKSTGQVYDRMFVRHWDTWNDHTQNH-----LFVQSIGADGQ---------ASGEPVW 234

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-----LQSNATE 295
           +        P +            F+ +G+  + S +K    + +S +     +  +A  
Sbjct: 235 VTKGFDGDTPSKP---FGDESEFTFAPDGQSLVFSARKAGNSEPWSTNFDLYSVAVSAPG 291

Query: 296 RLTN----TLFINISASYSPDSSQIVFESD-REG----KEQLYVMQSNGSDQKRISQDKE 346
           +LTN        +    +SPD   + + +  R G    K  +++        ++I+ + +
Sbjct: 292 QLTNLTEANPAWDTGPVFSPDGQTLAYRAMARPGFEADKYSIFLRDVATGQTRQIAANWD 351

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
            S     WS  G+ +  T     +  +  +         L  + ++ A   +PSG
Sbjct: 352 RSADTLQWSKDGNTLYTTAGDVGQTRLFAIDARNGVVTPLTGEGHVGAFQQTPSG 406



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 88/251 (35%), Gaps = 70/251 (27%)

Query: 263 PRFSSNGKRALISVQKDE------AMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQ 315
           P+ S +G+  + ++ + +      +  +Y + L+     ++L  +     +A +  D  +
Sbjct: 62  PQVSPDGEWVVYALTQTDVAANKRSSALYILGLKGEAQPQKLAISEGGANTARWGADG-K 120

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRIS------------QDKEASYFDPVWSPQ------ 357
           + F S R G  Q++V    G+   +++               +A        P       
Sbjct: 121 LYFLSGRSGSSQVWVSADKGATATQVTALPTDVNAYRINGAGDAVAVSLAVYPDAADLNA 180

Query: 358 ----GDLIAFTKFSGEKF-----------------AIGVMK--KDG---SQERLLVEDSN 391
               G   A  K +G+ +                  + V     DG    +   + +  +
Sbjct: 181 SVARGKTEAERKSTGQVYDRMFVRHWDTWNDHTQNHLFVQSIGADGQASGEPVWVTKGFD 240

Query: 392 LQAPT----------WSPSGRSLIFSRKKDGD-----TGSKLYS--IDLNGRNETLI-NT 433
              P+          ++P G+SL+FS +K G+     T   LYS  +   G+   L    
Sbjct: 241 GDTPSKPFGDESEFTFAPDGQSLVFSARKAGNSEPWSTNFDLYSVAVSAPGQLTNLTEAN 300

Query: 434 PAYASDPQWVG 444
           PA+ + P +  
Sbjct: 301 PAWDTGPVFSP 311



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/280 (12%), Positives = 83/280 (29%), Gaps = 69/280 (24%)

Query: 210 RDQILFEPRFSPNQQKVAYA-----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
               L +P+ SP+ + V YA        ++    +Y++  + +  P+++          R
Sbjct: 55  SANRLGDPQVSPDGEWVVYALTQTDVAANKRSSALYILGLKGEAQPQKLAISEGGANTAR 114

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-------------TLFINISASYSP 311
           + ++GK       +  +  ++    +     ++T                 + +S +  P
Sbjct: 115 WGADGK-LYFLSGRSGSSQVWVSADKGATATQVTALPTDVNAYRINGAGDAVAVSLAVYP 173

Query: 312 D----------SSQIV------------FESDREGKE-----QLYV--MQSNG---SDQK 339
           D                           F    +         L+V  + ++G    +  
Sbjct: 174 DAADLNASVARGKTEAERKSTGQVYDRMFVRHWDTWNDHTQNHLFVQSIGADGQASGEPV 233

Query: 340 RISQDKEASY--------FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--------SQE 383
            +++  +            +  ++P G  + F+              D          Q 
Sbjct: 234 WVTKGFDGDTPSKPFGDESEFTFAPDGQSLVFSARKAGNSEPWSTNFDLYSVAVSAPGQL 293

Query: 384 RLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             L E   +    P +SP G++L +         +  YSI
Sbjct: 294 TNLTEANPAWDTGPVFSPDGQTLAYRAMARPGFEADKYSI 333


>gi|282897924|ref|ZP_06305919.1| WD40-like protein Beta Propeller protein [Raphidiopsis brookii D9]
 gi|281197068|gb|EFA71969.1| WD40-like protein Beta Propeller protein [Raphidiopsis brookii D9]
          Length = 180

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 58/146 (39%), Gaps = 5/146 (3%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSS--NGKRALISVQKDEAMDIYSVDLQSNATE---RLTN 299
           RI   P   G      LA  F+    G+  +    +  + D+Y  D  + +      L  
Sbjct: 34  RILNYPLDSGGRGLNSLASEFNPHIGGRYIVFVTDRRGSQDVYLFDTITRSLVDLPELNT 93

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              +    + S D   IVF + R+GK  +++        + ++ +  A + +P  S  G+
Sbjct: 94  FDSMADHPAVSQDGRYIVFAASRQGKSGIFLYDRETRQSRNLTTNLAAQFRNPTISADGN 153

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERL 385
            IAF   +  ++ I V  + G +  +
Sbjct: 154 RIAFEFTNSGQWDILVYDQFGQKLNV 179



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 6/139 (4%)

Query: 202 NIRYLTPSRDQILFEPRFSP--NQQKVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFR 257
           N    +  R        F+P    + + + T D      VYL DT          +  F 
Sbjct: 37  NYPLDSGGRGLNSLASEFNPHIGGRYIVFVT-DRRGSQDVYLFDTITRSLVDLPELNTFD 95

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQI 316
           SM   P  S +G+  + +  +     I+  D ++  +  LT  L     + + S D ++I
Sbjct: 96  SMADHPAVSQDGRYIVFAASRQGKSGIFLYDRETRQSRNLTTNLAAQFRNPTISADGNRI 155

Query: 317 VFESDREGKEQLYVMQSNG 335
            FE    G+  + V    G
Sbjct: 156 AFEFTNSGQWDILVYDQFG 174



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 51/147 (34%), Gaps = 12/147 (8%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               I +  L S    R  N+L    +         IVF +DR G + +Y+  +      
Sbjct: 31  GYPRILNYPLDSGG--RGLNSLASEFNPHIG--GRYIVFVTDRRGSQDVYLFDTITRSLV 86

Query: 340 RI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQ 393
            +    + D  A +  P  S  G  I F      K  I +  ++  Q R L  +  +  +
Sbjct: 87  DLPELNTFDSMADH--PAVSQDGRYIVFAASRQGKSGIFLYDRETRQSRNLTTNLAAQFR 144

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYS 420
            PT S  G  + F     G     +Y 
Sbjct: 145 NPTISADGNRIAFEFTNSGQWDILVYD 171



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 40/124 (32%), Gaps = 13/124 (10%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  ++     +   +     +  AS F+P     G  I F         + +        
Sbjct: 31  GYPRILNYPLDSGGRGL---NSLASEFNPHI--GGRYIVFVTDRRGSQDVYLFDTITRSL 85

Query: 384 RLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYA 437
             L      DS    P  S  GR ++F+  + G +G  LY  D   R    + T   A  
Sbjct: 86  VDLPELNTFDSMADHPAVSQDGRYIVFAASRQGKSGIFLY--DRETRQSRNLTTNLAAQF 143

Query: 438 SDPQ 441
            +P 
Sbjct: 144 RNPT 147



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 27/88 (30%), Gaps = 1/88 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             + D +   P  S + + + +A         ++L D    ++     N  +    P  S
Sbjct: 91  LNTFDSMADHPAVSQDGRYIVFAASRQGKS-GIFLYDRETRQSRNLTTNLAAQFRNPTIS 149

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT 294
           ++G R           DI   D      
Sbjct: 150 ADGNRIAFEFTNSGQWDILVYDQFGQKL 177


>gi|256396381|ref|YP_003117945.1| cell wall binding repeat 2-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256362607|gb|ACU76104.1| putative cell wall binding repeat 2-containing protein
           [Catenulispora acidiphila DSM 44928]
          Length = 624

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 67/197 (34%), Gaps = 19/197 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+  +VAY   +        ++  R D +   +    +    P + + G   + +   
Sbjct: 75  WAPDGSRVAYVDQNGS------VISARFDGSDPIVVAANAGASHPTWINGGSLIVYA--- 125

Query: 279 DEAMDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                +YSV     A + L+         SA     +  +VF+    G   ++      +
Sbjct: 126 -HGGSLYSVPSLGGAVQVLSAGHQPGDQDSAPQGGANGSMVFQRKTNGATWVWTYNGYTN 184

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVEDSN---- 391
              R++     +   P  SP G  IA+          +  +  DGS    L  D+     
Sbjct: 185 AAARVANTNAGT--QPSISPNGRTIAYIHEDLNGLPQVFTVGVDGSNPTQLTTDAKPLQK 242

Query: 392 LQAPTWSPSGRSLIFSR 408
              P WS  G  + F+ 
Sbjct: 243 NDTPVWSSDGSLIAFAA 259



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 70/194 (36%), Gaps = 24/194 (12%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           ++ +G R       D+   + S     +    +          ++    S IV+      
Sbjct: 75  WAPDGSRVAYV---DQNGSVISARFDGSDPIVVAANAGA-SHPTWINGGSLIVYA----H 126

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTKFSGEKFAIGVMKKDGS 381
              LY + S G   + +S   +    D    PQG     + F + +     +       +
Sbjct: 127 GGSLYSVPSLGGAVQVLSAGHQPGDQDSA--PQGGANGSMVFQRKTNGATWVWTYNGYTN 184

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--------- 432
               +   +    P+ SP+GR++ +   +D +   +++++ ++G N T +          
Sbjct: 185 AAARVANTNAGTQPSISPNGRTIAYI-HEDLNGLPQVFTVGVDGSNPTQLTTDAKPLQKN 243

Query: 433 -TPAYASDPQWVGF 445
            TP ++SD   + F
Sbjct: 244 DTPVWSSDGSLIAF 257



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 43/143 (30%), Gaps = 12/143 (8%)

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              +                H   D      +  +G  N  ++F  ++  +        V
Sbjct: 127 GGSLYSVPSLGGAVQVLSAGHQPGDQD----SAPQGGANGSMVFQRKTNGAT------WV 176

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
              +G        +      +P  SPN + +AY   D   + +V+ +        +   +
Sbjct: 177 WTYNGYTNAAARVANTNAGTQPSISPNGRTIAYIHEDLNGLPQVFTVGVDGSNPTQLTTD 236

Query: 256 FRSM--ILAPRFSSNGKRALISV 276
            + +     P +SS+G     + 
Sbjct: 237 AKPLQKNDTPVWSSDGSLIAFAA 259


>gi|171058490|ref|YP_001790839.1| WD-40 repeat-containing protein [Leptothrix cholodnii SP-6]
 gi|170775935|gb|ACB34074.1| WD-40 repeat protein [Leptothrix cholodnii SP-6]
          Length = 1214

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 55/393 (13%), Positives = 111/393 (28%), Gaps = 66/393 (16%)

Query: 75   RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG-----RVIKEGKDRLRVEFR 129
            RS     +   S   ++           W++ G ++L+ G     ++   G+    +  +
Sbjct: 805  RSARLWSLRPGSLLARLRPGQRAVNDLAWSADGQRLLLAGEDGVAQIHSPGRAEPAITLQ 864

Query: 130  LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            L D        G K  +S A                IT      + R   V+    +   
Sbjct: 865  L-DSGGTPSAAGTKTRASAAPGPSRPP-------PEITAVALSADGRWAAVARKADADDG 916

Query: 190  KNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             +++   D R G       P     +    FSP+ Q +        D  +  L       
Sbjct: 917  LSTVQGFDARTGERRPLAGPGHRATVNMVAFSPDGQWLV----SAGDDDQALLWRAGGSA 972

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--S 306
             P  +   +  + +  FS++ +R L +   D +  I+S+         L ++        
Sbjct: 973  PPIALRGHQGAVNSAVFSADNRRVL-TASADGSARIWSLP-DGRLVRPLAHSRDGERLRM 1030

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            AS+S D        D    +++ + Q +     R  +  +       +SP G  +     
Sbjct: 1031 ASFSADGRLAATAGD---DQRVRIWQVDTGALLRTLEGHDDIVMSAHFSPDGHRLVSASQ 1087

Query: 367  SGEKF---------------------AIGVMKKDGSQERLLVEDSN-------------- 391
                                       + +   DG       +D +              
Sbjct: 1088 DRSARVWDVASGKALFTLPAGRTDIARLAIYSADGRLIVTTSDDGHARLWRAADGAAVGE 1147

Query: 392  ------LQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  +    +SP G+ L  + +        L
Sbjct: 1148 YAHADWIWNAAFSPDGQRLATASEDGSAAIWDL 1180



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/217 (18%), Positives = 87/217 (40%), Gaps = 18/217 (8%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P     A A++D      V L      R    +      ++A  FS +G+R L S   D 
Sbjct: 500 PAGTLAATASHDG----SVRLWHLPDGRQAAELRGHAGPVIAVSFSPDGQRVL-SAGHDR 554

Query: 281 AMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              ++  D ++     LT     +  ++A++SPD + I   + ++G  +L+  +      
Sbjct: 555 TARLW--DSRTGEP-LLTLQGHGDRLMAAAFSPDGNLIA-TASQDGAARLW--RGTDGRL 608

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             + +  +       +SP G  +A +  +     +  ++      RL      +++  +S
Sbjct: 609 LHVLEGHKHWVRCLAFSPDGRQLA-SGGNDGDVRLWNVRSGRLAARLAGHRDWIRSVAFS 667

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           P GRSL+ +     D  ++++S   + R   ++   A
Sbjct: 668 PDGRSLVSASD---DATARIWSTR-DARPRQVLRGHA 700



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 65/211 (30%), Gaps = 11/211 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V+S     +  + D                L    FSP+   +A A+ D        L
Sbjct: 545 QRVLSAGHDRTARLWDSRTGEPLLTLQGHGDRLMAAAFSPDGNLIATASQDG----AARL 600

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                 R    +   +  +    FS +G++   S   D  + +++V        RL    
Sbjct: 601 WRGTDGRLLHVLEGHKHWVRCLAFSPDGRQLA-SGGNDGDVRLWNV-RSGRLAARLAGHR 658

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++SPD   +V  SD        +  +  +  +++ +    S     +  +G  +
Sbjct: 659 DWIRSVAFSPDGRSLVSASD---DATARIWSTRDARPRQVLRGHATSVRSAAFDDRGARV 715

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             T        +     DG  +R        
Sbjct: 716 V-TGGGDGAVRLWR-SSDGRPQRRWQHPRGW 744



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 80/230 (34%), Gaps = 23/230 (10%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALI 274
              S + +  A A   D D     +         +R          +    FS +G+  + 
Sbjct: 897  ALSADGRWAAVARKADADDGLSTVQGFDARTGERRPLAGPGHRATVNMVAFSPDGQWLVS 956

Query: 275  SVQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +       D   +     +     L        SA +S D+ + V  +  +G  +++ + 
Sbjct: 957  A----GDDDQALLWRAGGSAPPIALRGHQGAVNSAVFSADNRR-VLTASADGSARIWSL- 1010

Query: 333  SNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             +G   + ++  ++        +S  G L A    +G+   + + + D       +E  +
Sbjct: 1011 PDGRLVRPLAHSRDGERLRMASFSADGRLAA---TAGDDQRVRIWQVDTGALLRTLEGHD 1067

Query: 392  LQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                +  +SP G  L+ + +   D  ++++ +      + L   PA  +D
Sbjct: 1068 DIVMSAHFSPDGHRLVSASQ---DRSARVWDV---ASGKALFTLPAGRTD 1111



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/377 (12%), Positives = 114/377 (30%), Gaps = 68/377 (18%)

Query: 115  RVIKEGKDRLRVEF------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      R  V        R+W  +D +    +       S R  A    DD    +  
Sbjct: 663  SVAFSPDGRSLVSASDDATARIWSTRDARP--RQVLRGHATSVRSAAF---DDRGARVVT 717

Query: 169  EKGDFNSRILFVSESVVSGIIKNS---LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
              GD   R+   S+       ++    +  +   G++    +         P  +P+ Q 
Sbjct: 718  GGGDGAVRLWRSSDGRPQRRWQHPRGWINAVQFVGSDQVLSSDDAGVTRVNP-IAPDGQV 776

Query: 226  VAYATYDD-----------------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            +    +                    +     L   R      R+   +  +    +S++
Sbjct: 777  LTLLGHRQAVTAVAVDSRTMLALTAGNDRSARLWSLRPGSLLARLRPGQRAVNDLAWSAD 836

Query: 269  GKRALISVQKDEAMDIY---------SVDLQSNAT-------ERLTNTLFINISA----- 307
            G+R L++ + D    I+         ++ L S  T        R +     +        
Sbjct: 837  GQRLLLAGE-DGVAQIHSPGRAEPAITLQLDSGGTPSAAGTKTRASAAPGPSRPPPEITA 895

Query: 308  -SYSPDSSQIVFESDREGKEQLYVM---QSNGSDQKRIS-QDKEASYFDPVWSPQGDLIA 362
             + S D          +  + L  +    +   +++ ++     A+     +SP G  + 
Sbjct: 896  VALSADGRWAAVARKADADDGLSTVQGFDARTGERRPLAGPGHRATVNMVAFSPDGQWLV 955

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                +G+     + +  GS   + +      + +  +S   R ++ +     D  ++++S
Sbjct: 956  ---SAGDDDQALLWRAGGSAPPIALRGHQGAVNSAVFSADNRRVLTAS---ADGSARIWS 1009

Query: 421  IDLNGRNETLINTPAYA 437
            +  +GR    +      
Sbjct: 1010 LP-DGRLVRPLAHSRDG 1025


>gi|170089081|ref|XP_001875763.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164649023|gb|EDR13265.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1797

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 90/293 (30%), Gaps = 43/293 (14%)

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                    ++WD      ++G          R   H               +  + + F 
Sbjct: 826  SGSYDATLKIWDALTGLSVVG--------PLR--GH--------------DEGVTSVAFS 861

Query: 181  SESV--VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
             +S    SG    ++ V D   G +I          +    FSPN + +   +YD+    
Sbjct: 862  PDSRHIASGSQDCTVRVWDAVTGQSIMDPIKGHGFGVTSVAFSPNGRYITSGSYDE---- 917

Query: 238  RVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             V + D    ++    +    + + +  +S +G+   IS   D  +  + V         
Sbjct: 918  TVRVWDAWTGQSVMDPLEGHSAWVSSVAYSPDGRFI-ISGSGDRTIRGWYVLTGQMIMHP 976

Query: 297  LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWS 355
            L       +S ++SPD   IV  S     + + V           S    +   +   +S
Sbjct: 977  LIGHQCNVLSVAFSPDQKYIVSGSS---DKTVRVWDFQTGQSVMDSLTGHSDCVYSVAFS 1033

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSLI 405
            P    I  + F      I +          +  +     + +  +SP GR + 
Sbjct: 1034 PDARYIVSSSFDET---IRLWDALTGHSVGDSFIGHHDAVLSVVFSPDGRYIA 1083



 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 54/278 (19%), Positives = 92/278 (33%), Gaps = 22/278 (7%)

Query: 138  QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCV 195
            QI  K ++S     R   H   D I        GD  + + F      +VSG    +L +
Sbjct: 781  QIGQKMYWSDSCFLRVPGHGKVDHI-----RGHGDGINSVAFSPNCKHIVSGSYDATLKI 835

Query: 196  MDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
             D   G ++       D+ +    FSP+ + +A  + D    +RV+   T         G
Sbjct: 836  WDALTGLSVVGPLRGHDEGVTSVAFSPDSRHIASGSQDC--TVRVWDAVTGQSIMDPIKG 893

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            +    + +  FS NG+    S   DE + ++      +  + L        S +YSPD  
Sbjct: 894  HGFG-VTSVAFSPNGRYIT-SGSYDETVRVWDAWTGQSVMDPLEGHSAWVSSVAYSPDGR 951

Query: 315  QIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
               F     G   +       G          + +     +SP    I           +
Sbjct: 952  ---FIISGSGDRTIRGWYVLTGQMIMHPLIGHQCNVLSVAFSPDQKYIVSGSSDKT---V 1005

Query: 374  GVMKKDGSQERL--LVEDSNL-QAPTWSPSGRSLIFSR 408
             V      Q  +  L   S+   +  +SP  R ++ S 
Sbjct: 1006 RVWDFQTGQSVMDSLTGHSDCVYSVAFSPDARYIVSSS 1043



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 68/187 (36%), Gaps = 26/187 (13%)

Query: 121  KDRLRVEFRLWDVKDRKQII----GKKFFSSPASW----RKIAHTISDDIY--------Q 164
                    R+WD    + ++    G   + S  ++    R I     D           Q
Sbjct: 912  SGSYDETVRVWDAWTGQSVMDPLEGHSAWVSSVAYSPDGRFIISGSGDRTIRGWYVLTGQ 971

Query: 165  SITGEKGDFNSRILFVSES-----VVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPR 218
             I          +L V+ S     +VSG    ++ V D + G ++          ++   
Sbjct: 972  MIMHPLIGHQCNVLSVAFSPDQKYIVSGSSDKTVRVWDFQTGQSVMDSLTGHSDCVYSVA 1031

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+ + +  +++D+   +R++   T        IG+    +L+  FS +G+    S   
Sbjct: 1032 FSPDARYIVSSSFDE--TIRLWDALTGHSVGDSFIGHHD-AVLSVVFSPDGRYIA-SGSA 1087

Query: 279  DEAMDIY 285
            D  + ++
Sbjct: 1088 DNTIRLW 1094


>gi|315106807|gb|EFT78783.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL030PA1]
          Length = 1086

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLTTGNQRRLTWLGAARN 89

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G    R+ +       D   S  G + 
Sbjct: 90  LVVGWQDDEHVVFSSPHQTNDVGLTWLYTVSLDG----RVERLGYGPGMDLAVSSDGAVA 145

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +          L+ + N     ++ +GR        
Sbjct: 146 VVTPSSGDCSRWKRYRGGTAAQIWLQPAGAETFLRLLREGNDNHDGYAAAGRYSVGWIDG 205

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 206 RLIFSSDMSDDDCPQAQAQVWSVDGQGHDLRQHTHHGEAEGYVRDPR 252



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 11/125 (8%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 9   PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     +Q+R++    A      W    + + F+            +  +  DG
Sbjct: 65  RPEVFVIDLTTGNQRRLTWLGAARNLVVGWQDD-EHVVFSSPHQTNDVGLTWLYTVSLDG 123

Query: 381 SQERL 385
             ERL
Sbjct: 124 RVERL 128



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 91/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 23  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLTTGNQRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +  L   +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 81  LTWLGAARNLVVGW-QDDEHVVFSSPHQTNDVGLTWLYTVSLDGR-VERLGYGPGMDL-- 136

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 137 AVSSDGAVAVVTPSSGDCSRWKRYRGGTAAQIWLQPAGAETFLRLLREGNDNHDGYAAAG 196

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  +  +   G   R        +     P   G 
Sbjct: 197 RYSVGWIDGRLIFSSDMSDDDCPQAQAQVWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 256

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 257 TIVY------HTHGALWRMTGLDAEPERL 279



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNTL-FINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+        +  + +PD +++   S      ++
Sbjct: 351 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGRIGRVLHIAPAPDGTKVALISH---DGRI 407

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 408 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 467

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 468 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 526

Query: 442 WVGF 445
              F
Sbjct: 527 -SPF 529



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 371 GTGEIRRIAQG---RIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 420

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 421 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 480

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER--LTNTLFINISAS 308
            F+++GK   +   +  D   D  + DL    T+R  L        S  
Sbjct: 481 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEASPF 529


>gi|291009566|ref|ZP_06567539.1| WD-40 repeat-containing protein [Saccharopolyspora erythraea NRRL
           2338]
          Length = 1213

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 77/222 (34%), Gaps = 28/222 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-------NFRSMILAPRFSSNGK 270
            FSP+ + +A A        +V++ D    R   R+        +  +   A  FS +G 
Sbjct: 596 AFSPDGRLLASADD------QVHVWDVATRRLRTRLTAPAANRTDRPAPYGAAAFSPDGT 649

Query: 271 RALISVQ-KDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           R   S       +D++ +D      + L +T    ++   +S D   +       G  ++
Sbjct: 650 RVAASTTLNTGRIDVWRLDAPDQPVKSLPSTAEGNDLE--FSADGRLLA----AAGGTRI 703

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +   +    + I      + F   +SP G  +A++        +  +         L E
Sbjct: 704 ELWDLDTG--RLIEALPVENGFSVSFSPDGRTLAYSASYPVGVGLWDL-AARRHLPALPE 760

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                 P +S  GR+L         TG  ++  DL  R   +
Sbjct: 761 SYKHFDPRFSTDGRTLATMGTDG--TGPIIW--DLATRTPKV 798



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 88/285 (30%), Gaps = 31/285 (10%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR++    D++ V    WDV  R+        ++  + R   +  +             F
Sbjct: 601 GRLLASADDQVHV----WDVATRRLRTRLTAPAANRTDRPAPYGAA------------AF 644

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +     V+ S      +  +  +D     ++ L  + +    E  FS + + +A      
Sbjct: 645 SPDGTRVAASTTLNTGRIDVWRLDAPDQPVKSLPSTAEGNDLE--FSADGRLLA-----A 697

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               R+ L D    R  + +        +  FS +G+    S      + ++  DL +  
Sbjct: 698 AGGTRIELWDLDTGRLIEALPVENG--FSVSFSPDGRTLAYSASYPVGVGLW--DLAARR 753

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                   + +    +S D   +           ++         K +  D++    D  
Sbjct: 754 HLPALPESYKHFDPRFSTDGRTLATMGTDGTGPIIW--DLATRTPK-VRIDQDMVILDFA 810

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           +SP  D   F   +            G   RL+    +  + + S
Sbjct: 811 FSP-ADQSLFIANADGSIDRRDHNGSGPPVRLVPARPDQGSSSMS 854



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/279 (13%), Positives = 76/279 (27%), Gaps = 30/279 (10%)

Query: 171  GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            G       FV+ +        ++ V D        +    D              +A   
Sbjct: 937  GFSAEGRRFVAVTGADDPRHRTITVGDVATRTPIAVVTGPDTYRAVNA---QGTLLATT- 992

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                D L V+ ++    R    + + +    A  FS + +    + + D    ++ +   
Sbjct: 993  --GPDGLHVWNVEGPAARLIHTVTDVKP-DAAIAFSPDSQHLA-TTRVDGTFGVWDL-TN 1047

Query: 291  SNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
              +    + +    ++   YSP+   +        +    V   N + +  +        
Sbjct: 1048 GRSITLPVPDGPAGDLVPRYSPNGRILAV------RTATGVALWNATTRTPLGNIPGHFG 1101

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT------WSPSGRS 403
                +SP    +A         AI +           +  +    P       WSP G  
Sbjct: 1102 RALAFSPDSQRLALATRDN---AILIRDLPSRTRWAALTGTVADTPDAISTLIWSPDGTR 1158

Query: 404  LIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQ 441
            L  +          L++ D       L +T      DP 
Sbjct: 1159 LAAAA----GNSLTLWTTDPEQATSALCDTLARDFRDPA 1193



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 75/252 (29%), Gaps = 34/252 (13%)

Query: 147  SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII-------------KNSL 193
            S    R +A T +DD     T   GD  +R      +                    + L
Sbjct: 939  SAEGRRFVAVTGADDPRHR-TITVGDVATRTPIAVVTGPDTYRAVNAQGTLLATTGPDGL 997

Query: 194  CVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
             V + +G   R +    D +      FSP+ Q +A       D        T        
Sbjct: 998  HVWNVEGPAARLIHTVTDVKPDAAIAFSPDSQHLATTRV---DGTFGVWDLTNGRSITLP 1054

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSP 311
            + +  +  L PR+S NG+   +      A+   +          L N       + ++SP
Sbjct: 1055 VPDGPAGDLVPRYSPNGRILAVRTATGVALWNAT------TRTPLGNIPGHFGRALAFSP 1108

Query: 312  DSSQIVFESDREGKEQLYVMQSNG----SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            DS ++           + +         +       D   +    +WSP G  +A    +
Sbjct: 1109 DSQRLALA---TRDNAILIRDLPSRTRWAALTGTVADTPDAISTLIWSPDGTRLA--AAA 1163

Query: 368  GEKFAIGVMKKD 379
            G    +     +
Sbjct: 1164 GNSLTLWTTDPE 1175



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 75/234 (32%), Gaps = 25/234 (10%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FS   ++    T  D+   R   +     R P  +        A   ++ G     +   
Sbjct: 938  FSAEGRRFVAVTGADDPRHRTITVGDVATRTPIAVVTGPDTYRA--VNAQGTLLATT--- 992

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 ++  +++  A   +      ++      ++SPDS  +   +  +G   ++ + +N
Sbjct: 993  -GPDGLHVWNVEGPAARLI--HTVTDVKPDAAIAFSPDSQHLA-TTRVDGTFGVWDL-TN 1047

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            G        D  A    P +SP G ++A    +G    + +           +     +A
Sbjct: 1048 GRSITLPVPDGPAGDLVPRYSPNGRILAVRTATG----VALWNATTRTPLGNIPGHFGRA 1103

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP----QWVG 444
              +SP  + L  + +   D    +  +    R   L  T A   D      W  
Sbjct: 1104 LAFSPDSQRLALATR---DNAILIRDLPSRTRWAALTGTVADTPDAISTLIWSP 1154



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 65/193 (33%), Gaps = 16/193 (8%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR-ALISV 276
             FS   + +    Y   ++        R D  P   G   S      FS+ G+R   ++ 
Sbjct: 894  TFSAEGRNLL-GAYKAGELTTWATEQLRRDSTPLLPGT--SDATLAGFSAEGRRFVAVTG 950

Query: 277  QKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D      +V D+ +     +      +   + +   + +       G + L+V    G
Sbjct: 951  ADDPRHRTITVGDVATRTPIAVVTGP--DTYRAVNAQGTLLATT----GPDGLHVWNVEG 1004

Query: 336  SDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NL 392
               + I    +        +SP    +A T+  G  F +  +  +G    L V D     
Sbjct: 1005 PAARLIHTVTDVKPDAAIAFSPDSQHLATTRVDGT-FGVWDL-TNGRSITLPVPDGPAGD 1062

Query: 393  QAPTWSPSGRSLI 405
              P +SP+GR L 
Sbjct: 1063 LVPRYSPNGRILA 1075


>gi|218438488|ref|YP_002376817.1| hypothetical protein PCC7424_1508 [Cyanothece sp. PCC 7424]
 gi|218171216|gb|ACK69949.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 1373

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 80/204 (39%), Gaps = 17/204 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FSPN QK+A  + D  + ++++ +D    R  K +   R  +    F  +G+    S  
Sbjct: 742 KFSPNGQKIATGSAD--NTIKLWAID---GRLIKTLSKHRGSVNTLAFRPDGQLLA-SGS 795

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++  D        L+       S ++S D   +V  S R+   +L+     G +
Sbjct: 796 VDNTIILWQAD--GTYLSTLSGHKNEVTSLNFSSDGQGLV-SSSRDKTIKLWKRNEQGKN 852

Query: 338 QKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAP 395
            +     K +       +SP    I     SG    I + K DG+  + +      +   
Sbjct: 853 YREFKSIKVDDKVNTVTFSPDDRFIVSGHDSG---KINLWKLDGTFLKTIGSHQDRVTKI 909

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLY 419
            +SP+ + L  S   DG    +++
Sbjct: 910 VFSPNSQLLA-SSSFDGT--IQIW 930



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 58/314 (18%), Positives = 113/314 (35%), Gaps = 45/314 (14%)

Query: 129  RLWDVK-----DRKQIIGKKFFSSPASWR-----------KIAHTISDDIYQSITGEKGD 172
            R+WD+        + I+   F  +   W+           + AH             K  
Sbjct: 952  RVWDIAITTNLSGQYILLAGFDDTINLWKNDGIKWNLIFSEYAHQAKVRAVAVSPHIKLK 1011

Query: 173  FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                ++F S S       N++ + + D + +  L  S D+ +     SP+ + +A A+ D
Sbjct: 1012 NTETMIFASASA-----DNTVQLWNPDRSKLLKLGFSHDKTILAVDISPDNRLIASASLD 1066

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                ++++ +   +       G+  S+    + S +G+    S   D  + ++++D    
Sbjct: 1067 --KTIKLWTIKDNLTNIKTLRGHQESVNGI-KISPDGQFMA-SASSDNTVKLWTID--GK 1120

Query: 293  ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              + L +   +      S DS  IV       ++Q   +       K+I +         
Sbjct: 1121 LLKTLHHDDDVYDV-DISSDSQWIV----SGSRDQTIKIWGRDGTLKKILRKHTDGVRTV 1175

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIFSR 408
              SP G LIA          + + + DG+   LL   S+ Q+P     +S   + LI   
Sbjct: 1176 AISPDGQLIASGSSDDT---VKIWRFDGT---LLTTLSDHQSPVLGVDFSSDSQKLI--- 1226

Query: 409  KKDGDTGSKLYSID 422
                D   KL++ D
Sbjct: 1227 SGGEDHIIKLWTRD 1240



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 63/176 (35%), Gaps = 14/176 (7%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           ++   +  IL  +FS NG++   +   D  + ++++D      + L+       + ++ P
Sbjct: 730 QLVRHKGDILTVKFSPNGQKIA-TGSADNTIKLWAID--GRLIKTLSKHRGSVNTLAFRP 786

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   +   S       + + Q++G+    +S   +       +S  G  +  +    +  
Sbjct: 787 DGQLLASGSV---DNTIILWQADGTYLSTLS-GHKNEVTSLNFSSDGQGLV-SSSRDKTI 841

Query: 372 AIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +    + G   R       D  +   T+SP  R ++            L+ +D  
Sbjct: 842 KLWKRNEQGKNYREFKSIKVDDKVNTVTFSPDDRFIV---SGHDSGKINLWKLDGT 894


>gi|159029912|emb|CAO90291.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 178

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 55/144 (38%), Gaps = 3/144 (2%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSP 311
           N R     P  S +G+   +   +  +  I   DLQ+   + L        I  S S S 
Sbjct: 33  NSRYNDEKPALSGDGRWLALLSNRRGSNQILLYDLQTKQYQTLGGLYTGQEITDSPSLSQ 92

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
               + +    EG+  + +        + +SQ+      +P  SP G  + F      ++
Sbjct: 93  TGRYLAYVVIIEGRPVIALYDRITDRSELLSQNYRGWLRNPRISPDGRYLVFESARRGQW 152

Query: 372 AIGVMKKDGSQERLLVEDSNLQAP 395
            + V+ +  + E  L + S +++P
Sbjct: 153 DVEVLDRGPNIELDLPDGSPVESP 176



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 4/124 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           N+ + +   + S D   +   S+R G  Q+ +        + +      +     P  S 
Sbjct: 33  NSRYNDEKPALSGDGRWLALLSNRRGSNQILLYDLQTKQYQTLGGLYTGQEITDSPSLSQ 92

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  +A+      +  I +  +   +  LL ++    L+ P  SP GR L+F   + G  
Sbjct: 93  TGRYLAYVVIIEGRPVIALYDRITDRSELLSQNYRGWLRNPRISPDGRYLVFESARRGQW 152

Query: 415 GSKL 418
             ++
Sbjct: 153 DVEV 156



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 4/120 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRAL 273
           +P  S + + +A  +       ++ L D +  +     G +    +  +P  S  G+   
Sbjct: 40  KPALSGDGRWLALLSNRRGSN-QILLYDLQTKQYQTLGGLYTGQEITDSPSLSQTGRYLA 98

Query: 274 ISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             V  +    I   D  ++ +E L+ N      +   SPD   +VFES R G+  + V+ 
Sbjct: 99  YVVIIEGRPVIALYDRITDRSELLSQNYRGWLRNPRISPDGRYLVFESARRGQWDVEVLD 158



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 5/105 (4%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSR----DQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             + S  ++  D    +Y T        +I   P  S   + +AY    +   + + L D
Sbjct: 55  NRRGSNQILLYDLQTKQYQTLGGLYTGQEITDSPSLSQTGRYLAYVVIIEGRPV-IALYD 113

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
              DR+     N+R  +  PR S +G+  +    +    D+  +D
Sbjct: 114 RITDRSELLSQNYRGWLRNPRISPDGRYLVFESARRGQWDVEVLD 158



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 4/104 (3%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTW 397
           + +   +   P  S  G  +A          I +      Q + L           +P+ 
Sbjct: 31  TLNSRYNDEKPALSGDGRWLALLSNRRGSNQILLYDLQTKQYQTLGGLYTGQEITDSPSL 90

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           S +GR L +    +G     LY    +       N   +  +P+
Sbjct: 91  SQTGRYLAYVVIIEGRPVIALYDRITDRSELLSQNYRGWLRNPR 134


>gi|29829254|ref|NP_823888.1| hypothetical protein SAV_2712 [Streptomyces avermitilis MA-4680]
 gi|29606361|dbj|BAC70423.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 447

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 99/305 (32%), Gaps = 52/305 (17%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF----EPRFSPNQQKVAYA--- 229
           I FVS+   +G    S+ V +     + Y +     + F    +P  S + Q +A++   
Sbjct: 146 IAFVSDRTPAGGTTPSVYVRNTPVGKLSYASHGYQGVPFTWAGQPAMSADCQWMAFSATL 205

Query: 230 -----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE---- 280
                  +   + R  + D  I++      +     + P  S++G+              
Sbjct: 206 PATPDHVEQPRVYRYRIYDGTIEQVSPDSADGSRAAVRPSISADGRYVAYQSSIPHPGGP 265

Query: 281 --AMDIYSVDLQSNATERLTNTLF------INISASYSPDSSQIVFES--------DREG 324
               DIY  DL++   E+ +           +   S S D   + F+S        D  G
Sbjct: 266 ANDSDIYVRDLETGTLEKASVGRHGRPADRASTGPSLSADGRHVAFDSYASNLAPGDTNG 325

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFT----KFSGEKFAIGVMKKD 379
              ++V   +    + +      +Y      S  G  +A+     + S    A+ +    
Sbjct: 326 TVNVFVRDLDAGTTRLVKGAGRHAYTAEAALSGDGLHLAYVSAGIRGSRGVPAVYLRDLA 385

Query: 380 GSQERLLV-------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR---NET 429
             + RL+         D     P+ +P G ++ F           L   D NG       
Sbjct: 386 TGRTRLISVDTRGHRNDRAAGNPSVNPDGTAVAFDS-----ASPDLVPGDTNGTVDVFLR 440

Query: 430 LINTP 434
            + +P
Sbjct: 441 RLGSP 445


>gi|218678398|ref|ZP_03526295.1| translocation protein TolB [Rhizobium etli CIAT 894]
          Length = 56

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/56 (53%), Positives = 38/56 (67%)

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           + APTW+P+GR L+F R+  G  G +LYSIDL G NE LI TP+Y S P W   M+
Sbjct: 1   MNAPTWAPNGRVLMFFRQAAGAGGPQLYSIDLTGYNEQLIKTPSYGSAPAWSPLME 56



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 350 FDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
             P W+P G ++ F + +       +  +   G  E+L+   S   AP WSP
Sbjct: 2   NAPTWAPNGRVLMFFRQAAGAGGPQLYSIDLTGYNEQLIKTPSYGSAPAWSP 53



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 262 APRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           AP ++ NG+  +   Q        +YS+DL +   E+L  T     + ++SP
Sbjct: 3   APTWAPNGRVLMFFRQAAGAGGPQLYSIDL-TGYNEQLIKTPSYGSAPAWSP 53



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 307 ASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            +++P+   ++F       G  QLY +   G +++ I      S   P WSP
Sbjct: 4   PTWAPNGRVLMFFRQAAGAGGPQLYSIDLTGYNEQLIKTPSYGS--APAWSP 53


>gi|302867834|ref|YP_003836471.1| WD40 repeat, subgroup [Micromonospora aurantiaca ATCC 27029]
 gi|302570693|gb|ADL46895.1| WD40 repeat, subgroup [Micromonospora aurantiaca ATCC 27029]
          Length = 1924

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 59/399 (14%), Positives = 114/399 (28%), Gaps = 86/399 (21%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRK---QIIGKKFFSSPASWRKIAHTISDDIYQS 165
             V   G   L          +LWD  D +   ++   +    P  WR   + ++      
Sbjct: 1496 SVRFNGDGSLLATAASDGAIQLWDTDDGQVRHELTRHRGSVWPVVWRPDQNQVATSSNDG 1555

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR------- 218
             T     ++ R   +  ++     K +      DG  +          L+EPR       
Sbjct: 1556 TTR---LWDVRSGQLQHTLRGHGRKVTALSFRDDGEVLAACGNDGVIRLWEPRTGRLVRQ 1612

Query: 219  ------------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                        F P +  VA  + D      V+L +T      + +      + A  FS
Sbjct: 1613 LASPADRLLSVVFCPEEPLVATPSGDGG----VHLWNTDTGADERELNVDTDHVWAVAFS 1668

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------- 317
             +G    ++   D+                LT       + ++SPD   I          
Sbjct: 1669 PDGD--ALATANDDDTVRLWYRRTGRHFATLTPHRGRVRTVAFSPDGETIATGCDDQAVR 1726

Query: 318  ------------------------FESD-----REGKEQL-YVMQSNGSDQKRISQDKEA 347
                                    F S+       G +    V  +   +++ +  + + 
Sbjct: 1727 LWDAATATCRLTLEHHTDRVYSVGFNSEGTLLASAGNDGTAVVWDAVTGERRLVLTEHDG 1786

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
              +   +SP G+L+A    +G+   I +      +    L      + +  +SP    L 
Sbjct: 1787 RLWSCAFSPDGNLLA---TAGDDLVIRLWDPVTGRLHGTLAAHTRRVWSVHFSPDSSLLA 1843

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                   D   +L+ +  +  +  L  T     D  W  
Sbjct: 1844 ---SAGDDGTVRLWDV-ADPEHAQLRTTLIGLPDG-WAA 1877



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 118/384 (30%), Gaps = 62/384 (16%)

Query: 42   SANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ 101
                 PV +A++   ++  +G     V+  D   + +          Q   +     R+ 
Sbjct: 1237 EVGRLPVPVAYSPDGAVLAVGSDDGGVLLCD-TATGL-----PVRTLQGHRSRVYAVRYD 1290

Query: 102  DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA-HTISD 160
              +      LVTG           +  RLWD                   R +     + 
Sbjct: 1291 AAS----HQLVTGSA--------DLTVRLWDADHG-------------DVRHVIEDVFTG 1325

Query: 161  DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
             ++  +T  +             +V G     + + D  GA +R+  P     ++   FS
Sbjct: 1326 WVWPMLTDGR----------RGRLVVGDAAGVVRLYDTRGARLRHEWPGHSAPIWGTSFS 1375

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+ ++V  A         V   D    +    +     ++     S +G+      Q   
Sbjct: 1376 PDGRRVVVAD----SAGTVRGWDIPTGKLAFEV-QEPEVVYRVVHSPDGRLLAAVGQHG- 1429

Query: 281  AMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               I+          R       ++ A    PD + +    D  G  +L+  ++      
Sbjct: 1430 --RIWIRRATDGELLRAPRGHEADVYALDIHPDGTLMA-TGDTHGALRLW--ETETGRPV 1484

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTW 397
            R+   +  + +   ++  G L+A     G   AI +   D  Q R  L     ++    W
Sbjct: 1485 RVLGRQRGAIYSVRFNGDGSLLATAASDG---AIQLWDTDDGQVRHELTRHRGSVWPVVW 1541

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSI 421
             P    +  S     D  ++L+ +
Sbjct: 1542 RPDQNQVATSSN---DGTTRLWDV 1562



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 63/370 (17%), Positives = 104/370 (28%), Gaps = 82/370 (22%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRK---QIIGKKFFSSPASWRKIAHTIS----DDIYQSIT 167
            +V     D      RLWDV+  +    + G     +  S+R     ++    D + +   
Sbjct: 1547 QVATSSNDGTT---RLWDVRSGQLQHTLRGHGRKVTALSFRDDGEVLAACGNDGVIRLWE 1603

Query: 168  GEKGDFNSRILFVSES--------------VVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
               G    ++   ++                 SG     L   D  GA+ R L    D +
Sbjct: 1604 PRTGRLVRQLASPADRLLSVVFCPEEPLVATPSGDGGVHLWNTD-TGADERELNVDTDHV 1662

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             +   FSP+   +A A  DD     V L   R  R    +   R  +    FS +G+   
Sbjct: 1663 -WAVAFSPDGDALATANDDD----TVRLWYRRTGRHFATLTPHRGRVRTVAFSPDGETIA 1717

Query: 274  -----------------------------------------ISVQKDEAMDIYSVDLQSN 292
                                                      S   D    ++  D  + 
Sbjct: 1718 TGCDDQAVRLWDAATATCRLTLEHHTDRVYSVGFNSEGTLLASAGNDGTAVVW--DAVTG 1775

Query: 293  ATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                 LT       S ++SPD + +    D      + +                   + 
Sbjct: 1776 ERRLVLTEHDGRLWSCAFSPDGNLLATAGD---DLVIRLWDPVTGRLHGTLAAHTRRVWS 1832

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +SP   L+A     G      V   + +Q R  +          SP GR      K D
Sbjct: 1833 VHFSPDSSLLASAGDDGTVRLWDVADPEHAQLRTTLIGLPDGWAAVSPDGRY-----KLD 1887

Query: 412  GDTGSKLYSI 421
            GD G + + +
Sbjct: 1888 GDPGGQFWHV 1897


>gi|50843044|ref|YP_056271.1| tricorn protease [Propionibacterium acnes KPA171202]
 gi|50840646|gb|AAT83313.1| tricorn protease [Propionibacterium acnes KPA171202]
          Length = 1111

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 55  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLTTGNQRRLTWLGAARN 114

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G    R+ +       D   S  G + 
Sbjct: 115 LVVGWQDDEHVVFSSPHQTNDVGLTWLYTVSLDG----RVERLGYGPGMDLAVSSDGAVA 170

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +          L+ + N     ++ +GR        
Sbjct: 171 VVTPSSGDCSRWKRYRGGTAAQIWLQPAGAETFLRLLREGNDNHDGYAAAGRYSVGWIDG 230

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 231 RLIFSSDMSDDDCPQAQAQVWSVDGQGHDLRQHTHHGEAEGYVRDPR 277



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 49/125 (39%), Gaps = 11/125 (8%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 34  PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 89

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     +Q+R++    A      W    + + F+            +  +  DG
Sbjct: 90  RPEVFVIDLTTGNQRRLTWLGAARNLVVGWQDD-EHVVFSSPHQTNDVGLTWLYTVSLDG 148

Query: 381 SQERL 385
             ERL
Sbjct: 149 RVERL 153



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 91/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 48  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLTTGNQRR 105

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +  L   +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 106 LTWLGAARNLVVGW-QDDEHVVFSSPHQTNDVGLTWLYTVSLDGR-VERLGYGPGMDL-- 161

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 162 AVSSDGAVAVVTPSSGDCSRWKRYRGGTAAQIWLQPAGAETFLRLLREGNDNHDGYAAAG 221

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  +  +   G   R        +     P   G 
Sbjct: 222 RYSVGWIDGRLIFSSDMSDDDCPQAQAQVWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 281

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 282 TIVY------HTHGALWRMTGLDAEPERL 304



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNTL-FINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+        +  + +PD +++   S      ++
Sbjct: 376 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGRIGRVLHIAPAPDGTKVALISH---DGRI 432

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 433 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 492

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 493 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 551

Query: 442 WVGF 445
              F
Sbjct: 552 -SPF 554



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 396 GTGEIRRIAQG---RIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 445

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 446 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 505

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER--LTNTLFINISAS 308
            F+++GK   +   +  D   D  + DL    T+R  L        S  
Sbjct: 506 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEASPF 554


>gi|294056565|ref|YP_003550223.1| hypothetical protein Caka_3040 [Coraliomargarita akajimensis DSM
           45221]
 gi|293615898|gb|ADE56053.1| hypothetical protein Caka_3040 [Coraliomargarita akajimensis DSM
           45221]
          Length = 889

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 101/275 (36%), Gaps = 35/275 (12%)

Query: 141 GKKFFSSPASWRKI--AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           G ++ + P   R++      S D Y+ +  E    +    +V        + N       
Sbjct: 45  GDQYSNGPEYLRRLNLITDTSSDTYKQLQREALLDHP---YVRTYEWLIEVHNPYWGNH- 100

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
               +  +  + D       +     K  + +Y     +       ++ R  + +     
Sbjct: 101 --GPMNTVFQNGDFN----TWDRGGLK-EWLSYGSRFDVIRIGARGQVTRIRQMVEQAEG 153

Query: 259 MILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQ 315
           ++     S +G++ + S++++  +   IY +++      +LT    I ++   Y P   +
Sbjct: 154 IVRDADISFDGQKIMFSMRRNKADDYHIYEMNVDGTNLRQLTFGSEIGDVDPIYLPSG-K 212

Query: 316 IVFESDREGKE---------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           I+F S R+ K           ++  +++G++  ++S +   S F     P G  + ++++
Sbjct: 213 ILFSSTRDPKMCQCNRHISLNVFTAEADGANILQVSGNGL-SDFHSSLMPDGT-VMYSRW 270

Query: 367 S------GEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                  G    +     DG++ + L   +N   P
Sbjct: 271 EYVDRHFGPSLGLWTSNPDGTRHK-LFMGNNSWVP 304



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 64/190 (33%), Gaps = 28/190 (14%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGKE--QL 328
            +      D+  +  +     R+         I   A  S D  +I+F   R   +   +
Sbjct: 123 WLSYGSRFDVIRIGAR-GQVTRIRQMVEQAEGIVRDADISFDGQKIMFSMRRNKADDYHI 181

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---------AIGVMKKD 379
           Y M  +G++ ++++   E    DP++ P G  I F+     K           +   + D
Sbjct: 182 YEMNVDGTNLRQLTFGSEIGDVDPIYLPSGK-ILFSSTRDPKMCQCNRHISLNVFTAEAD 240

Query: 380 GSQERLLVEDSN-LQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGRNETLINTP 434
           G+    +  +       +  P G  +++SR     +       L++ + +G    L    
Sbjct: 241 GANILQVSGNGLSDFHSSLMPDGT-VMYSRWEYVDRHFGPSLGLWTSNPDGTRHKLFMGN 299

Query: 435 AYASDPQWVG 444
                  WV 
Sbjct: 300 N-----SWVP 304


>gi|87311092|ref|ZP_01093216.1| hypothetical protein DSM3645_18771 [Blastopirellula marina DSM
           3645]
 gi|87286183|gb|EAQ78093.1| hypothetical protein DSM3645_18771 [Blastopirellula marina DSM
           3645]
          Length = 540

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 88/230 (38%), Gaps = 21/230 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +  N + V  +     DI +    D T+     + + +  ++   P +            
Sbjct: 228 WFKNFRWVPASEDSQFDISQQQWTDRTQPLANQESLRDLITIANQPLWRP--------GT 279

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNG 335
            D  M++  +++++    RL     + +   +S D S++    +   EG   L+ +    
Sbjct: 280 PDGDMNLLLLNIRTGDFRRLPYQHGVALGGCFSKDRSRVYLAGNLPLEGSMCLFEIDLLS 339

Query: 336 SDQKRISQD--KEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQERLLVED 389
            +  RI     +       V SP    +A  K +  K    F I +   +  + R L E 
Sbjct: 340 GENIRIGGPELQSGMVLSCVLSPDDRYLAVLKQATGKGPLDFQIYIHDLETGETRPLGET 399

Query: 390 SNLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLINTPA 435
            +   P+W P G+ ++   ++    D  + + +  +DL+G+  +L+   +
Sbjct: 400 MDTGFPSWLPDGKGIVLVTREYAALDKPSINTVCRMDLSGKITSLLQGSS 449



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 88/252 (34%), Gaps = 27/252 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAP 263
            P +  +     FS ++ +V  A     E  + ++ +D       +  G      M+L+ 
Sbjct: 299 LPYQHGVALGGCFSKDRSRVYLAGNLPLEGSMCLFEIDLLSGENIRIGGPELQSGMVLSC 358

Query: 264 RFSSNGKRALISVQKDE----AMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVF 318
             S + +   +  Q          IY  DL++  T  L     ++    S+ PD   IV 
Sbjct: 359 VLSPDDRYLAVLKQATGKGPLDFQIYIHDLETGETRPL--GETMDTGFPSWLPDGKGIVL 416

Query: 319 ES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +      D+     +  M  +G     I+   + S    + S     I +     + + 
Sbjct: 417 VTREYAALDKPSINTVCRMDLSGK----ITSLLQGSSPVMLMS--ESRIMYENNETDLW- 469

Query: 373 IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
                 DG   +++ +       PT SP G  +I   K  G  G + Y ++++    T I
Sbjct: 470 -YSCDLDGKDVQMIGDGLKGYGFPTASPDGNQVI-MMKFGGAEGPRPYLVEISSGQATPI 527

Query: 432 N-TPAYASDPQW 442
              P   + P W
Sbjct: 528 PAGPGLWAYPAW 539



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 79/221 (35%), Gaps = 25/221 (11%)

Query: 192 SLCVMDRD---GANIRYLTPS-RDQILFEPRFSPNQQKVAYATYDDEDIL---RVYLMDT 244
           S+C+ + D   G NIR   P  +  ++     SP+ + +A             ++Y+ D 
Sbjct: 329 SMCLFEIDLLSGENIRIGGPELQSGMVLSCVLSPDDRYLAVLKQATGKGPLDFQIYIHDL 388

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLT 298
                  R          P +  +GK  ++  ++  A+D      +  +DL    T  L 
Sbjct: 389 ETGE--TRPLGETMDTGFPSWLPDGKGIVLVTREYAALDKPSINTVCRMDLSGKITSLL- 445

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  S       S+I++E++    +  Y    +G D + I  D    Y  P  SP G
Sbjct: 446 ----QGSSPVMLMSESRIMYENNE--TDLWYSCDLDGKDVQMI-GDGLKGYGFPTASPDG 498

Query: 359 DLIAFTKFSG-EKFAIGVMKKDGSQER-LLVEDSNLQAPTW 397
           + +   KF G E     +++    Q   +         P W
Sbjct: 499 NQVIMMKFGGAEGPRPYLVEISSGQATPIPAGPGLWAYPAW 539



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 63/185 (34%), Gaps = 17/185 (9%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-----YAT 230
            +  + ++   G +   + + D +    R L  + D     P + P+ + +      YA 
Sbjct: 366 YLAVLKQATGKGPLDFQIYIHDLETGETRPLGETMD--TGFPSWLPDGKGIVLVTREYAA 423

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D   I  V  MD          G+   M+++           I  + +E    YS DL 
Sbjct: 424 LDKPSINTVCRMDLSGKITSLLQGSSPVMLMSES--------RIMYENNETDLWYSCDLD 475

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASY 349
               + + + L      + SPD +Q++          + Y+++ +      I       +
Sbjct: 476 GKDVQMIGDGLKGYGFPTASPDGNQVIMMKFGGAEGPRPYLVEISSGQATPI-PAGPGLW 534

Query: 350 FDPVW 354
             P W
Sbjct: 535 AYPAW 539



 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/130 (13%), Positives = 38/130 (29%), Gaps = 9/130 (6%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKK-D 379
           +G   L ++     D +R+      +     +S     +             +  +    
Sbjct: 281 DGDMNLLLLNIRTGDFRRLPYQHGVALGGC-FSKDRSRVYLAGNLPLEGSMCLFEIDLLS 339

Query: 380 GSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDT--GSKLYSIDLNGRNETLINTP 434
           G   R+    ++   + +   SP  R L   ++  G      ++Y  DL       +   
Sbjct: 340 GENIRIGGPELQSGMVLSCVLSPDDRYLAVLKQATGKGPLDFQIYIHDLETGETRPLGET 399

Query: 435 AYASDPQWVG 444
                P W+ 
Sbjct: 400 MDTGFPSWLP 409


>gi|332706637|ref|ZP_08426698.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332354521|gb|EGJ34000.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1161

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 50/334 (14%), Positives = 100/334 (29%), Gaps = 45/334 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G ++  G     V  R+WDV   + +          + R +A               G  
Sbjct: 642 GTIVASGSGDKTV--RIWDVSTGECL--NILPEHSQTVRAVA-----------CSPDGAI 686

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                       SG    ++ + D D              +    FSP+   +A ++ D 
Sbjct: 687 L----------ASGCEDKTIKLWDSDTGECLSTLQGHSHQIRSVAFSPDGTTLASSSDDK 736

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                V L +    +  K +      I +  FS +G     S   D+ + ++  +  +  
Sbjct: 737 ----TVRLWNLSTGKCVKMLRGHTKSIRSIGFSKDGTTLA-SSSDDKTVRLW--NFSTGE 789

Query: 294 -TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              +L        S + SPD   +   SD    + + +   N        +      +  
Sbjct: 790 CLNKLYGHTNGVWSIALSPDGVTLASGSD---DQTVRLWNINTGQCLNTFRGYTNGVWSI 846

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            +SP G  +A      E   + +      +  + L    + + +  +S  G  L+     
Sbjct: 847 AFSPDGTTLA---SGSEDQTVRLWDVGTGECLDTLRGHTNLIFSVAFSRDGAILV---SG 900

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             D   +L+ I   G      + P +     +  
Sbjct: 901 SKDQTLRLWDIS-TGECLNTFHGPKWVLSVAFSP 933



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 54/299 (18%), Positives = 90/299 (30%), Gaps = 42/299 (14%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                        RLWDV   + +          + R   HT  + I+       G     
Sbjct: 853  TTLASGSEDQTVRLWDVGTGECL---------DTLR--GHT--NLIFSVAFSRDGAIL-- 897

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                    VSG    +L + D               +L    FSPN + +A    DD   
Sbjct: 898  --------VSGSKDQTLRLWDISTGECLNTFHGPKWVLSV-AFSPNGEILASGHNDD--- 945

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TE 295
             RV L D       + +    S++ +  FS +G     S  +D+ + ++  D+ +     
Sbjct: 946  -RVRLWDISTGECFQTLLGHTSLVWSVAFSPDGTTLA-SGCEDQTVKLW--DVGTGDCLS 1001

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             L     I  S  +S D   +       G     + V      +     +          
Sbjct: 1002 TLQGHRNIIKSVVFSGDGRILA-----SGCEDHTVRVWDVGTGECLNTLRGHTHRLRSVA 1056

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
            ++P G LIA   +        V    G   + L   +N + +  +S  G  L  S    
Sbjct: 1057 FNPNGKLIASGSYDKTCKLWDVQ--TGECLKTLHGHTNVVWSVAFSRDGLMLASSSNDG 1113



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 83/240 (34%), Gaps = 15/240 (6%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
               G ++  +     ++ SG    ++ + + +              ++   FSP+   +A
Sbjct: 797  HTNGVWSIALSPDGVTLASGSDDQTVRLWNINTGQCLNTFRGYTNGVWSIAFSPDGTTLA 856

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D      V L D         +    ++I +  FS +G   L+S  KD+ + ++  
Sbjct: 857  SGSEDQ----TVRLWDVGTGECLDTLRGHTNLIFSVAFSRDGA-ILVSGSKDQTLRLW-- 909

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            D+ +       +     +S ++SP+   +         +++ +   +  +  +      +
Sbjct: 910  DISTGECLNTFHGPKWVLSVAFSPNGEILA---SGHNDDRVRLWDISTGECFQTLLGHTS 966

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
              +   +SP G  +A      E   + +           ++      ++  +S  GR L 
Sbjct: 967  LVWSVAFSPDGTTLA---SGCEDQTVKLWDVGTGDCLSTLQGHRNIIKSVVFSGDGRILA 1023



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 83/230 (36%), Gaps = 24/230 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + +       +    FSP+ Q +A      + + +++L      +    +    S + +
Sbjct: 531 AKSVFTQPFGSILSVSFSPDGQLLA----AGDSMGKIHLWQIADSQYRLTLKGHTSWVWS 586

Query: 263 PRFSS--NG----KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQ 315
             F+   +G     + L S  +D+ + ++  D+ ++     L        S + S D + 
Sbjct: 587 LAFTRLDDGNSEETQILASSSEDQTVRLW--DIATSQCLHTLRGHRSRIWSVAVSGDGTI 644

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +   S   G + + +   +  +   I  +   +      SP G ++A      E   I +
Sbjct: 645 VASGS---GDKTVRIWDVSTGECLNILPEHSQTVRAVACSPDGAILA---SGCEDKTIKL 698

Query: 376 MKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              D  +    L      +++  +SP G +L  S     D   +L+++  
Sbjct: 699 WDSDTGECLSTLQGHSHQIRSVAFSPDGTTLASSSD---DKTVRLWNLST 745


>gi|317156083|ref|XP_001825162.2| WD repeat-containing protein [Aspergillus oryzae RIB40]
          Length = 543

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 76/215 (35%), Gaps = 17/215 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  +      I      R   +    FSP+ ++VA    D +    V + D   +     
Sbjct: 330 MWDVSTSSEQIFQEPKGRVSRVNRVAFSPDGRQVAAGLADGK----VLIWDVSTNTQITT 385

Query: 253 IGNFRSMILAPRFSS-NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYS 310
            G     + A  FS  +GK  L+S  KD+ +  +  D ++   +   +     ++A ++S
Sbjct: 386 QG-HSGAVQALEFSPTSGK--LVSGSKDKTIRFW--DPRTGRKDNEISHPGGGLNAIAFS 440

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +   SD      + V  +    Q+R+         D  +S  G  +A     G  
Sbjct: 441 PDGKSLASGSD---DSSVRVWNAETLAQRRLLPAHTGPINDLAFSADGRQLASVSDDGT- 496

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             + +            +    +A  +SP G+ L 
Sbjct: 497 --LRIWSLADDYVLSSHQQRKAEAVAFSPDGKYLA 529



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 82/232 (35%), Gaps = 21/232 (9%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN--SRILFVSESVVSGIIKNS 192
           D  +++   +  +   W      +S    Q     KG  +  +R+ F  +          
Sbjct: 315 DGTKVLCGTYEGAVKMW-----DVSTSSEQIFQEPKGRVSRVNRVAFSPDGRQVAAGLAD 369

Query: 193 LCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
             V+  D   N +  T      +    FSP   K+   + D      +   D R  R   
Sbjct: 370 GKVLIWDVSTNTQITTQGHSGAVQALEFSPTSGKLVSGSKDK----TIRFWDPRTGRKDN 425

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYS 310
            I +    + A  FS +GK    S   D ++ ++  + ++ A  R L          ++S
Sbjct: 426 EISHPGGGLNAIAFSPDGKSLA-SGSDDSSVRVW--NAETLAQRRLLPAHTGPINDLAFS 482

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            D  Q+   SD +G  +++ +  +      +S  ++       +SP G  +A
Sbjct: 483 ADGRQLASVSD-DGTLRIWSLADDY----VLSSHQQRKAEAVAFSPDGKYLA 529



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 86/246 (34%), Gaps = 20/246 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           + T +   +      SP+  KV   TY  E  ++++ + T  ++  +      S +    
Sbjct: 298 WETGAGAGMPMSVALSPDGTKVLCGTY--EGAVKMWDVSTSSEQIFQEPKGRVSRVNRVA 355

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G++   +   D  + I+ V   +  T +         +  +SP S ++V  S    
Sbjct: 356 FSPDGRQVA-AGLADGKVLIWDVSTNTQITTQ--GHSGAVQALEFSPTSGKLVSGSK--- 409

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + +         +               +SP G  +A      +  ++ V   +   +R
Sbjct: 410 DKTIRFWDPRTGRKDNEISHPGGGLNAIAFSPDGKSLA---SGSDDSSVRVWNAETLAQR 466

Query: 385 LL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID----LNGRNETLINTPAYAS 438
            L       +    +S  GR L        D   +++S+     L+   +      A++ 
Sbjct: 467 RLLPAHTGPINDLAFSADGRQLASVSD---DGTLRIWSLADDYVLSSHQQRKAEAVAFSP 523

Query: 439 DPQWVG 444
           D +++ 
Sbjct: 524 DGKYLA 529



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 73/192 (38%), Gaps = 14/192 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP  +++A      + ++ V+ M TR   A    G    M ++   S +G + L    
Sbjct: 266 AFSPKNERMAVGELSPQRVV-VWDMKTRQPLAGWETGAGAGMPMSVALSPDGTKVL-CGT 323

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQS 333
            + A+ ++ V   S   E++       +S     ++SPD  Q+      +GK  ++ +  
Sbjct: 324 YEGAVKMWDVSTSS---EQIFQEPKGRVSRVNRVAFSPDGRQVA-AGLADGKVLIWDVS- 378

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             ++ +  +Q    +     +SP    +  +    +       +       +      L 
Sbjct: 379 --TNTQITTQGHSGAVQALEFSPTSGKLV-SGSKDKTIRFWDPRTGRKDNEISHPGGGLN 435

Query: 394 APTWSPSGRSLI 405
           A  +SP G+SL 
Sbjct: 436 AIAFSPDGKSLA 447



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 8/115 (6%)

Query: 168 GEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
              G   + I F  +  S+ SG   +S+ V + +    R L P+    + +  FS + ++
Sbjct: 428 SHPGGGLNAIAFSPDGKSLASGSDDSSVRVWNAETLAQRRLLPAHTGPINDLAFSADGRQ 487

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           +A  + D    +     D  +    +R         A  FS +GK     V  + 
Sbjct: 488 LASVSDDGTLRIWSLADDYVLSSHQQRKAE------AVAFSPDGKYLASVVALEG 536


>gi|294812557|ref|ZP_06771200.1| Protease [Streptomyces clavuligerus ATCC 27064]
 gi|294325156|gb|EFG06799.1| Protease [Streptomyces clavuligerus ATCC 27064]
          Length = 1071

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 88/256 (34%), Gaps = 24/256 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +     DG    +   S D  +  PR SP+   VA+ +  D        +         
Sbjct: 24  DVWAAPLDGGRA-WRVSSDDIPVDHPRISPDGTHVAWTSRRDGAPE--VHVGPLDGGPTT 80

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQKDEAMD---IYSVDLQSNATERLTNTLFINISA 307
           R+ ++ S     R ++  G+   +S Q   ++      +V L       L      +++ 
Sbjct: 81  RLTHWGSARTGVRGWTPGGEILAVSAQGQASLRRTLARAVPLDGGPAATLPYGPVGDVAH 140

Query: 308 S------YSPD-SSQIV-FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           S       S     +   ++  R G   +L++ +    +  RI +D + +   P+W   G
Sbjct: 141 SAAGVLLLSATMGREAAGWKRYRGGTAGKLWIDREGAGEFTRIHEDLDGNIEYPLWV--G 198

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           + IAF        A+     DGS  R         A   +  G  ++++         +L
Sbjct: 199 ERIAFLSDHEGVGALYSSLPDGSGLRRHTPVDGFYARHAATDGTRVVYAS------AGEL 252

Query: 419 YSIDLNGRNETLINTP 434
           + +D  G +      P
Sbjct: 253 WIVDGLGEDSEPRPVP 268



 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 69/190 (36%), Gaps = 19/190 (10%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+    + + D    +++  L      R+++          SPD + + + S R+G  ++
Sbjct: 14  GELIAFTAEDD----VWAAPLDGGRAWRVSSDDIPVDHPRISPDGTHVAWTSRRDGAPEV 69

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL 385
           +V   +G    R++    A      W+P G+++A +              +  DG     
Sbjct: 70  HVGPLDGGPTTRLTHWGSARTGVRGWTPGGEILAVSAQGQASLRRTLARAVPLDGGPAAT 129

Query: 386 LVED--SNLQAPTW------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLI--NTP 434
           L      ++           +  GR     ++  G T  KL+ ID  G  E T I  +  
Sbjct: 130 LPYGPVGDVAHSAAGVLLLSATMGREAAGWKRYRGGTAGKLW-IDREGAGEFTRIHEDLD 188

Query: 435 AYASDPQWVG 444
                P WVG
Sbjct: 189 GNIEYPLWVG 198



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 72/232 (31%), Gaps = 31/232 (13%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A+   DD                  R+ +    +  PR S +G     + ++D A 
Sbjct: 14  GELIAFTAEDD------VWAAPLDGGRAWRVSSDDIPVDHPRISPDGTHVAWTSRRDGAP 67

Query: 283 DIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE---GKEQLYVMQSNGSDQ 338
           +++   L    T RLT+          ++P    +   +  +    +     +  +G   
Sbjct: 68  EVHVGPLDGGPTTRLTHWGSARTGVRGWTPGGEILAVSAQGQASLRRTLARAVPLDGGPA 127

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTK-----------FSGEKFAIGVMKKDGSQERLLV 387
             +         D   S  G L+                 G    + + ++   +   + 
Sbjct: 128 ATL---PYGPVGDVAHSAAGVLLLSATMGREAAGWKRYRGGTAGKLWIDREGAGEFTRIH 184

Query: 388 E--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           E  D N++ P W   G  + F    +G     LYS   +G      +TP   
Sbjct: 185 EDLDGNIEYPLWV--GERIAFLSDHEG--VGALYSSLPDGSGLRR-HTPVDG 231



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 50/315 (15%), Positives = 98/315 (31%), Gaps = 39/315 (12%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN----IR 204
           +  R+  HT  D  Y       G   +R+++ S           L ++D  G +      
Sbjct: 221 SGLRR--HTPVDGFYARHAATDG---TRVVYASA--------GELWIVDGLGEDSEPRPV 267

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP- 263
            +     +    PR       V  A  D         +   +     R G  R++ + P 
Sbjct: 268 PVRLGGQRTDLRPRIIHADHFVGSAAPDHTGRGSAVEIRGGVHWVTHREGPARALAVEPG 327

Query: 264 -------RFSSNGKRALISVQKDEAMDIYSVDLQSNAT-----ERLTNTL-FINISASYS 310
                   F ++G+  ++ V   E  D       + AT      RL        +  + +
Sbjct: 328 VRARIPRVFRADGEEHVVWVTDAEGEDALEFAPATGATAGAAPRRLGAGRLGRVLGLAVA 387

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD S+    S      ++ +++    + + + + +        +SP    +A++      
Sbjct: 388 PDGSRAAVASH---DGRVLLVERESGEIREVDRGEHGEATGLTFSPDSGWLAWSHAGPTP 444

Query: 371 FA-IGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NG 425
              + +    D S             P ++  G+ L F  ++  D     +  DL    G
Sbjct: 445 LRQLKLANTADLSVSEATPLRFRDYQPAFTLDGKHLAFLSERAFDPVYDAHVFDLAFVGG 504

Query: 426 RNETLINTPAYASDP 440
               LI   A    P
Sbjct: 505 CRPHLITLAATTPSP 519


>gi|238501254|ref|XP_002381861.1| WD repeat-containing protein, putative [Aspergillus flavus
           NRRL3357]
 gi|220692098|gb|EED48445.1| WD repeat-containing protein, putative [Aspergillus flavus
           NRRL3357]
          Length = 543

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 76/215 (35%), Gaps = 17/215 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  +      I      R   +    FSP+ ++VA    D +    V + D   +     
Sbjct: 330 MWDVSTSSEQIFQEPKGRVSRVNRVAFSPDGRQVAAGLADGK----VLIWDVSTNTQITT 385

Query: 253 IGNFRSMILAPRFSS-NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYS 310
            G     + A  FS  +GK  L+S  KD+ +  +  D ++   +   +     ++A ++S
Sbjct: 386 QG-HSGAVQALEFSPTSGK--LVSGSKDKTIRFW--DPRTGRKDNEISHPGGGLNAIAFS 440

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +   SD      + V  +    Q+R+         D  +S  G  +A     G  
Sbjct: 441 PDGKSLASGSD---DSSVRVWNAETLAQRRLLPAHTGPINDLAFSADGRQLASVSDDGT- 496

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             + +            +    +A  +SP G+ L 
Sbjct: 497 --LRIWSLADDYVLSSHQQRKAEAVAFSPDGKYLA 529



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 82/232 (35%), Gaps = 21/232 (9%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN--SRILFVSESVVSGIIKNS 192
           D  +++   +  +   W      +S    Q     KG  +  +R+ F  +          
Sbjct: 315 DGTKVLCGTYEGAVKMW-----DVSTSSEQIFQEPKGRVSRVNRVAFSPDGRQVAAGLAD 369

Query: 193 LCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
             V+  D   N +  T      +    FSP   K+   + D      +   D R  R   
Sbjct: 370 GKVLIWDVSTNTQITTQGHSGAVQALEFSPTSGKLVSGSKDK----TIRFWDPRTGRKDN 425

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYS 310
            I +    + A  FS +GK    S   D ++ ++  + ++ A  R L          ++S
Sbjct: 426 EISHPGGGLNAIAFSPDGKSLA-SGSDDSSVRVW--NAETLAQRRLLPAHTGPINDLAFS 482

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            D  Q+   SD +G  +++ +  +      +S  ++       +SP G  +A
Sbjct: 483 ADGRQLASVSD-DGTLRIWSLADDY----VLSSHQQRKAEAVAFSPDGKYLA 529



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 86/246 (34%), Gaps = 20/246 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           + T +   +      SP+  KV   TY  E  ++++ + T  ++  +      S +    
Sbjct: 298 WETGAGAGMPMSVALSPDGTKVLCGTY--EGAVKMWDVSTSSEQIFQEPKGRVSRVNRVA 355

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G++   +   D  + I+ V   +  T +         +  +SP S ++V  S    
Sbjct: 356 FSPDGRQVA-AGLADGKVLIWDVSTNTQITTQ--GHSGAVQALEFSPTSGKLVSGSK--- 409

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + +         +               +SP G  +A      +  ++ V   +   +R
Sbjct: 410 DKTIRFWDPRTGRKDNEISHPGGGLNAIAFSPDGKSLA---SGSDDSSVRVWNAETLAQR 466

Query: 385 LL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID----LNGRNETLINTPAYAS 438
            L       +    +S  GR L        D   +++S+     L+   +      A++ 
Sbjct: 467 RLLPAHTGPINDLAFSADGRQLASVSD---DGTLRIWSLADDYVLSSHQQRKAEAVAFSP 523

Query: 439 DPQWVG 444
           D +++ 
Sbjct: 524 DGKYLA 529



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 73/192 (38%), Gaps = 14/192 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP  +++A      + ++ V+ M TR   A    G    M ++   S +G + L    
Sbjct: 266 AFSPKNERMAVGELSPQRVV-VWDMKTRQPLAGWETGAGAGMPMSVALSPDGTKVL-CGT 323

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQS 333
            + A+ ++ V   S   E++       +S     ++SPD  Q+      +GK  ++ +  
Sbjct: 324 YEGAVKMWDVSTSS---EQIFQEPKGRVSRVNRVAFSPDGRQVA-AGLADGKVLIWDVS- 378

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             ++ +  +Q    +     +SP    +  +    +       +       +      L 
Sbjct: 379 --TNTQITTQGHSGAVQALEFSPTSGKLV-SGSKDKTIRFWDPRTGRKDNEISHPGGGLN 435

Query: 394 APTWSPSGRSLI 405
           A  +SP G+SL 
Sbjct: 436 AIAFSPDGKSLA 447



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 8/115 (6%)

Query: 168 GEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
              G   + I F  +  S+ SG   +S+ V + +    R L P+    + +  FS + ++
Sbjct: 428 SHPGGGLNAIAFSPDGKSLASGSDDSSVRVWNAETLAQRRLLPAHTGPINDLAFSADGRQ 487

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           +A  + D    +     D  +    +R         A  FS +GK     V  + 
Sbjct: 488 LASVSDDGTLRIWSLADDYVLSSHQQRKAE------AVAFSPDGKYLASVVALEG 536


>gi|57640687|ref|YP_183165.1| acylamino acid-releasing enzyme [Thermococcus kodakarensis KOD1]
 gi|57159011|dbj|BAD84941.1| acylamino acid-releasing enzyme [Thermococcus kodakarensis KOD1]
          Length = 632

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 53/311 (17%), Positives = 98/311 (31%), Gaps = 57/311 (18%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           +++F    +          +   DG  +   T  +      PRFSP+ + VA+ +  D++
Sbjct: 25  KLVFQVTEISVEKDDYFSRLYLYDGRRVEPFTSGKKDAN--PRFSPDGKLVAFTSKRDKE 82

Query: 236 ILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKD--------------- 279
                L     D    + +  F+  I   RF+ +GK   +    D               
Sbjct: 83  SKEAELYVIPTDGGEARLLAKFKYGIKNLRFTEDGKGIAVVTPIDVEKKPKDDVHIIKEL 142

Query: 280 -----EAMDI-------YSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGK 325
                    I       Y VD++S   +RLT          +   + ++ F +  DRE K
Sbjct: 143 PFWFNGVGWIYGKRSVVYLVDVESGKKKRLTPKNLDVGQIRF--HNGKLYFTAQEDRERK 200

Query: 326 EQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----AIGVMKKDG 380
             +  +    G   KR++  K  S  D +    G  I               I     + 
Sbjct: 201 PMVSDLYVLEGRKAKRLTPGK-WSISDFIPLDDGTFILKANTRERGIPTNTHIYHYNPET 259

Query: 381 SQERLLVED--------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            + R L +D                 +A      G  + +         + L+ ++L+G+
Sbjct: 260 GEMRKLTKDLDRAAYNSLNSDVRGAQRAELVFRDG-WVYYIATDGPR--ANLFRVNLDGK 316

Query: 427 NETLINTPAYA 437
            E +I      
Sbjct: 317 IERVIGGDRSV 327



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 85/215 (39%), Gaps = 54/215 (25%)

Query: 269 GKRALI-----SVQKDEAMD-IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           G++ +      SV+KD+    +Y  D      E  T+    + +  +SPD   + F S R
Sbjct: 23  GRKLVFQVTEISVEKDDYFSRLYLYD--GRRVEPFTSGKK-DANPRFSPDGKLVAFTSKR 79

Query: 323 EGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------------- 365
           + +    +LYV+ ++G + + +++ K     +  ++  G  IA                 
Sbjct: 80  DKESKEAELYVIPTDGGEARLLAKFKYG-IKNLRFTEDGKGIAVVTPIDVEKKPKDDVHI 138

Query: 366 -------------FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
                          G++  + ++  +  +++ L  ++ ++    +  +G+ L F+ ++D
Sbjct: 139 IKELPFWFNGVGWIYGKRSVVYLVDVESGKKKRLTPKNLDVGQIRFH-NGK-LYFTAQED 196

Query: 412 GDT---GSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +     S LY   L GR    + TP      +W 
Sbjct: 197 RERKPMVSDLYV--LEGRKAKRL-TPG-----KWS 223


>gi|302684517|ref|XP_003031939.1| hypothetical protein SCHCODRAFT_38592 [Schizophyllum commune H4-8]
 gi|300105632|gb|EFI97036.1| hypothetical protein SCHCODRAFT_38592 [Schizophyllum commune H4-8]
          Length = 745

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 60/330 (18%), Positives = 113/330 (34%), Gaps = 45/330 (13%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGK-----KFFSSPASWRKIAHTIS--DD------IYQSI 166
                    R+WD    +QI G+     +  +S A      H  S  DD        +  
Sbjct: 391 ASGGRDNTVRIWDAASGEQIGGELRGLARDVNSVAFSPDGKHIASGSDDGTIRVWDVREA 450

Query: 167 TGEKGDFNSRILFVS--------ESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEP 217
             E G        ++        + +VSG    ++ + D + G ++       D  +   
Sbjct: 451 KKESGIPVGHTNIITSVACSPDGKYIVSGSGDKTVRLWDAQTGQSVGDPMTGHDATVTCV 510

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  ++A A+YD+     V + +         +       L   FS +G R + S  
Sbjct: 511 AFSPDSTRIASASYDE----TVRVWNAETRLPVGVLQGHNDWALCVAFSPDGTRLV-SGS 565

Query: 278 KDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            DE M ++  D+ +     E L        S S+S D + I    DR     + +  +  
Sbjct: 566 MDETMRLW--DVATGQQIGEPLYGHKCRVQSVSFSSDGAYIASGFDRS----IRLWDAKS 619

Query: 336 SDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSN 391
             Q+R   +  +A      +SP    +           I +          E L      
Sbjct: 620 RLQRRGALEGHQAYVLSLAFSPDDVYLVSGSSDTT---IRLWDVKTGEQMGEPLTGHTDR 676

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + + ++SP+G  ++       D   +++S+
Sbjct: 677 VWSVSFSPNGNYVVSGSY---DRTVRVWSV 703



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 89/297 (29%), Gaps = 44/297 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       R+WD K  KQ                     DD+   +    G     
Sbjct: 268 STIASGSRDGTIRIWDAKTGKQQG-------------------DDVNSVVFSHDG----- 303

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                  +VSG   +++ + D D       +   + I+     S + + +A  + D    
Sbjct: 304 -----TRIVSGAQDHTVRIWDVDTQQQLGDSMRHEGIVRSVSISHDDKYIASGSVDG--- 355

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             V + D    +         S + A  F S+      S  +D  + I+  D  S   E+
Sbjct: 356 -TVRVWDAGRGQQVWVSHGHTSWVYAVAFLSDSTHIA-SGGRDNTVRIW--DAASG--EQ 409

Query: 297 LT---NTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           +      L  ++ S ++SPD   I   SD +G  +++ ++    +   I           
Sbjct: 410 IGGELRGLARDVNSVAFSPDGKHIASGSD-DGTIRVWDVREAKKES-GIPVGHTNIITSV 467

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             SP G  I                     + +   D+ +    +SP    +  +  
Sbjct: 468 ACSPDGKYIVSGSGDKTVRLWDAQTGQSVGDPMTGHDATVTCVAFSPDSTRIASASY 524



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 81/230 (35%), Gaps = 34/230 (14%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  I       + +++   FSP+   +A  + D      + + D +  +           
Sbjct: 244 GRQIGSAMRGHEDMVWSVAFSPDGSTIASGSRDG----TIRIWDAKTGKQQ------GDD 293

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQI 316
           + +  FS +G R + S  +D  + I+ VD Q    ++L        I  S S S D   I
Sbjct: 294 VNSVVFSHDGTRIV-SGAQDHTVRIWDVDTQ----QQLGDSMRHEGIVRSVSISHDDKYI 348

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              S  +G  +++   +    Q  +S    +  +   +      IA     G    + + 
Sbjct: 349 ASGS-VDGTVRVW--DAGRGQQVWVSHGHTSWVYAVAFLSDSTHIA---SGGRDNTVRIW 402

Query: 377 KKD-----GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   G + R L  D  + +  +SP G+ +        D   +++ +
Sbjct: 403 DAASGEQIGGELRGLARD--VNSVAFSPDGKHIASGSD---DGTIRVWDV 447


>gi|289426373|ref|ZP_06428116.1| WD40-like protein [Propionibacterium acnes SK187]
 gi|289428742|ref|ZP_06430425.1| WD40-like protein [Propionibacterium acnes J165]
 gi|289153101|gb|EFD01819.1| WD40-like protein [Propionibacterium acnes SK187]
 gi|289158140|gb|EFD06360.1| WD40-like protein [Propionibacterium acnes J165]
 gi|332675996|gb|AEE72812.1| tricorn protease [Propionibacterium acnes 266]
          Length = 1120

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 43  PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 98

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A  F   W    + + F+            +  +  DG
Sbjct: 99  RPEVFVIDLATGDQRRLTWLGAARSFVVGWQDD-EHVVFSSPHQTNDVGLAWLYTVSLDG 157

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 158 HVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 204



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 64  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLATGDQRRLTWLGAARS 123

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G  ++           D   S  G + 
Sbjct: 124 FVVGWQDDEHVVFSSPHQTNDVGLAWLYTVSLDGHVERL----GYGPGMDLAVSSDGAVA 179

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +      +   L+ + N     ++ +GR        
Sbjct: 180 VVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAGRYSVGWIDG 239

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 240 RLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPR 286



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 90/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 57  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLATGDQRR 114

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +      +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 115 LTWLGAARSFVVGW-QDDEHVVFSSPHQTNDVGLAWLYTVSLD-GHVERLGYGPGMDL-- 170

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 171 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAG 230

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  I  +   G   R        +     P   G 
Sbjct: 231 RYSVGWIDGRLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 290

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 291 TIVY------HTHGALWRMTGLDAEPERL 313



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+    +   +  + +PD +++   S      ++
Sbjct: 385 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISH---DGRI 441

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 442 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 501

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 502 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 560

Query: 442 WVGF 445
              F
Sbjct: 561 -SPF 563



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 405 GTGEIRRIAQG---QIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 454

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 455 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 514

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER 296
            F+++GK   +   +  D   D  + DL    T+R
Sbjct: 515 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQR 549


>gi|159029913|emb|CAO90292.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 172

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 3/115 (2%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKE 326
           +  + +  ++ +  IY  D        L     ++    S S S D   IVF + R+GK 
Sbjct: 51  RYLVFASDRNGSQAIYLFDAIDRRLLSLPGLNSLDQIASSPSISEDGRYIVFTASRQGKT 110

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +Y+       ++ I+ D  A   +P+ S  G  +AF      ++ I +    G 
Sbjct: 111 AIYLYDRQTQQRREIAPDLLAEVRNPIISADGSKVAFEAAKNGQWDIMIYDLSGR 165



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 10/120 (8%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP----QGDLIAFTKFSG 368
           S  +VF SDR G + +Y+  +   D++ +S     S      SP     G  I FT    
Sbjct: 50  SRYLVFASDRNGSQAIYLFDAI--DRRLLSLPGLNSLDQIASSPSISEDGRYIVFTASRQ 107

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            K AI +  +   Q R +  D   +   P  S  G  + F   K+G     +Y  DL+GR
Sbjct: 108 GKTAIYLYDRQTQQRREIAPDLLAEVRNPIISADGSKVAFEAAKNGQWDIMIY--DLSGR 165



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 48/119 (40%), Gaps = 12/119 (10%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL------APRFSSNGKRALISVQ 277
           + + +A+ D      +YL D       +R+ +   +        +P  S +G+  + +  
Sbjct: 51  RYLVFAS-DRNGSQAIYLFD----AIDRRLLSLPGLNSLDQIASSPSISEDGRYIVFTAS 105

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +     IY  D Q+     +   L   + +   S D S++ FE+ + G+  + +   +G
Sbjct: 106 RQGKTAIYLYDRQTQQRREIAPDLLAEVRNPIISADGSKVAFEAAKNGQWDIMIYDLSG 164



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 32/88 (36%), Gaps = 1/88 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S DQI   P  S + + + +          +YL D +  +  +   +  + +  P  S
Sbjct: 81  LNSLDQIASSPSISEDGRYIVFTASRQGKTA-IYLYDRQTQQRREIAPDLLAEVRNPIIS 139

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT 294
           ++G +      K+   DI   DL     
Sbjct: 140 ADGSKVAFEAAKNGQWDIMIYDLSGRVL 167



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 29/88 (32%), Gaps = 8/88 (9%)

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKDG 412
             + F        AI +        RLL             +P+ S  GR ++F+  + G
Sbjct: 51  RYLVFASDRNGSQAIYLFDAI--DRRLLSLPGLNSLDQIASSPSISEDGRYIVFTASRQG 108

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDP 440
            T   LY      R E   +  A   +P
Sbjct: 109 KTAIYLYDRQTQQRREIAPDLLAEVRNP 136


>gi|314986603|gb|EFT30695.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL005PA2]
 gi|314990961|gb|EFT35052.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL005PA3]
 gi|328752329|gb|EGF65945.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL020PA1]
          Length = 1086

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 9   PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A  F   W    + + F+            +  +  DG
Sbjct: 65  RPEVFVIDLATGDQRRLTWLGAARSFVVGWQDD-EHVVFSSPHQTNDVGLAWLYTVSLDG 123

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 124 HVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 170



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLATGDQRRLTWLGAARS 89

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G  ++           D   S  G + 
Sbjct: 90  FVVGWQDDEHVVFSSPHQTNDVGLAWLYTVSLDGHVERL----GYGPGMDLAVSSDGAVA 145

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +      +   L+ + N     ++ +GR        
Sbjct: 146 VVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAGRYSVGWIDG 205

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 206 RLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPR 252



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 90/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 23  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLATGDQRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +      +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 81  LTWLGAARSFVVGW-QDDEHVVFSSPHQTNDVGLAWLYTVSLD-GHVERLGYGPGMDL-- 136

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 137 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAG 196

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  I  +   G   R        +     P   G 
Sbjct: 197 RYSVGWIDGRLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 256

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 257 TIVY------HTHGALWRMTGLDAEPERL 279



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+    +   +  + +PD +++   S      ++
Sbjct: 351 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISH---DGRI 407

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 408 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 467

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 468 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 526

Query: 442 WVGF 445
              F
Sbjct: 527 -SPF 529



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 371 GTGEIRRIAQG---QIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 420

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 421 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 480

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER 296
            F+++GK   +   +  D   D  + DL    T+R
Sbjct: 481 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQR 515


>gi|313826011|gb|EFS63725.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL063PA1]
          Length = 1086

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 9   PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A  F   W    + + F+            +  +  DG
Sbjct: 65  RPEVFVIDLATGDQRRLTWLGAARSFVVGWQDD-EHVVFSSPHQTNDVGLAWLYTVSLDG 123

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 124 HVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 170



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLATGDQRRLTWLGAARS 89

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G  ++           D   S  G + 
Sbjct: 90  FVVGWQDDEHVVFSSPHQTNDVGLAWLYTVSLDGHVERL----GYGPGMDLAVSSDGAVA 145

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +      +   L+ + N     ++ +GR        
Sbjct: 146 VVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAGRYSVGWIDG 205

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 206 RLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPR 252



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/280 (15%), Positives = 94/280 (33%), Gaps = 42/280 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 23  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLATGDQRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +      +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 81  LTWLGAARSFVVGW-QDDEHVVFSSPHQTNDVGLAWLYTVSLD-GHVERLGYGPGMDL-- 136

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 137 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAG 196

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  I  +   G   R        +     P   G 
Sbjct: 197 RYSVGWIDGRLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 256

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQ 441
           ++++       T   L+ +  L+   E L N     + P+
Sbjct: 257 TIVY------HTHGALWRMTGLDAEPERLENDLGIGAPPR 290



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+    +   +  + +PD +++   S      ++
Sbjct: 351 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISH---DGRI 407

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 408 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 467

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 468 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 526

Query: 442 WVGF 445
              F
Sbjct: 527 -SPF 529


>gi|313763511|gb|EFS34875.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL013PA1]
 gi|313816693|gb|EFS54407.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL059PA1]
 gi|313829479|gb|EFS67193.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL063PA2]
 gi|314914811|gb|EFS78642.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL005PA4]
 gi|314919374|gb|EFS83205.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL050PA1]
 gi|314920718|gb|EFS84549.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL050PA3]
 gi|314930598|gb|EFS94429.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL067PA1]
 gi|314954447|gb|EFS98853.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL027PA1]
 gi|314957526|gb|EFT01629.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL002PA1]
 gi|314968428|gb|EFT12526.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL037PA1]
 gi|315099139|gb|EFT71115.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL059PA2]
 gi|315108937|gb|EFT80913.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL030PA2]
 gi|327454891|gb|EGF01546.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL087PA3]
 gi|327457823|gb|EGF04478.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL083PA2]
 gi|328755275|gb|EGF68891.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL087PA1]
 gi|328758244|gb|EGF71860.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL025PA2]
          Length = 1086

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 9   PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A  F   W    + + F+            +  +  DG
Sbjct: 65  RPEVFVIDLATGDQRRLTWLGAARSFVVGWQDD-EHVVFSSPHQTNDVGLAWLYTVSLDG 123

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 124 HVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 170



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLATGDQRRLTWLGAARS 89

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G  ++           D   S  G + 
Sbjct: 90  FVVGWQDDEHVVFSSPHQTNDVGLAWLYTVSLDGHVERL----GYGPGMDLAVSSDGAVA 145

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +      +   L+ + N     ++ +GR        
Sbjct: 146 VVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAGRYSVGWNDG 205

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 206 RLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPR 252



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 91/270 (33%), Gaps = 44/270 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 23  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLATGDQRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +      +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 81  LTWLGAARSFVVGW-QDDEHVVFSSPHQTNDVGLAWLYTVSLD-GHVERLGYGPGMDL-- 136

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPV--- 353
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++       
Sbjct: 137 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAG 196

Query: 354 -----WSPQGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SG 401
                W+  G LI  +  S +     +  I  +   G   R        +     P   G
Sbjct: 197 RYSVGWN-DGRLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPRTDG 255

Query: 402 RSLIFSRKKDGDTGSKLYSID-LNGRNETL 430
            ++++       T   L+ +  L+   E L
Sbjct: 256 TTIVY------HTHGALWRMTGLDAEPERL 279



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+    +   +  + +PD +++   S      ++
Sbjct: 351 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISH---DGRI 407

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 408 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 467

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 468 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 526

Query: 442 WVGF 445
              F
Sbjct: 527 -SPF 529



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 371 GTGEIRRIAQG---QIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 420

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 421 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 480

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER 296
            F+++GK   +   +  D   D  + DL    T+R
Sbjct: 481 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQR 515


>gi|284053081|ref|ZP_06383291.1| WD40 domain-containing protein [Arthrospira platensis str. Paraca]
          Length = 176

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 5/134 (3%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSP 311
           N  S  + P+ SS+    + +  +    DIY  D +      L     I+      + S 
Sbjct: 44  NSPSTEMNPQISSD--YLVFASDRQGRQDIYLYDRKQLELIDLPGLNSIDAIASEPAIST 101

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D + IVF S R G+  +Y+   N    + ++ +  A    P  +    +IAF      ++
Sbjct: 102 DGNYIVFNSTRGGQSDIYLYNRNTRQLRNLTDNLNAQVRHPTINADASVIAFESSLNGQW 161

Query: 372 AIGVMKKDGSQERL 385
            I V  + G    +
Sbjct: 162 DIVVYNRYGQALNI 175



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 6/125 (4%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSP 356
           N+    ++   S D   +VF SDR+G++ +Y+      +   +      +A   +P  S 
Sbjct: 44  NSPSTEMNPQISSD--YLVFASDRQGRQDIYLYDRKQLELIDLPGLNSIDAIASEPAIST 101

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDT 414
            G+ I F    G +  I +  ++  Q R L +  ++ ++ PT +     + F    +G  
Sbjct: 102 DGNYIVFNSTRGGQSDIYLYNRNTRQLRNLTDNLNAQVRHPTINADASVIAFESSLNGQW 161

Query: 415 GSKLY 419
              +Y
Sbjct: 162 DIVVY 166



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 2/135 (1%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           ++R  + +       P+ S +    A      +DI         +   P  + +  ++  
Sbjct: 37  DLRVNSVNSPSTEMNPQISSDYLVFASDRQGRQDIYLYDRKQLELIDLPG-LNSIDAIAS 95

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFES 320
            P  S++G   + +  +    DIY  +  +     LT+ L   +   + + D+S I FES
Sbjct: 96  EPAISTDGNYIVFNSTRGGQSDIYLYNRNTRQLRNLTDNLNAQVRHPTINADASVIAFES 155

Query: 321 DREGKEQLYVMQSNG 335
              G+  + V    G
Sbjct: 156 SLNGQWDIVVYNRYG 170



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 27/88 (30%), Gaps = 1/88 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S D I  EP  S +   + + +        +YL +    +      N  + +  P  +
Sbjct: 87  LNSIDAIASEPAISTDGNYIVFNSTRGGQS-DIYLYNRNTRQLRNLTDNLNAQVRHPTIN 145

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT 294
           ++          +   DI   +    A 
Sbjct: 146 ADASVIAFESSLNGQWDIVVYNRYGQAL 173


>gi|295131119|ref|YP_003581782.1| WD40-like protein [Propionibacterium acnes SK137]
 gi|291376729|gb|ADE00584.1| WD40-like protein [Propionibacterium acnes SK137]
 gi|313793901|gb|EFS41925.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL110PA1]
 gi|313801291|gb|EFS42542.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL110PA2]
 gi|313813439|gb|EFS51153.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL025PA1]
 gi|313819596|gb|EFS57310.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL046PA2]
 gi|313822079|gb|EFS59793.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL036PA1]
 gi|313823687|gb|EFS61401.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL036PA2]
 gi|313831242|gb|EFS68956.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL007PA1]
 gi|313834854|gb|EFS72568.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL056PA1]
 gi|314924729|gb|EFS88560.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL036PA3]
 gi|314961991|gb|EFT06092.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL002PA2]
 gi|314963744|gb|EFT07844.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL082PA1]
 gi|314974118|gb|EFT18214.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL053PA1]
 gi|314976592|gb|EFT20687.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL045PA1]
 gi|314978953|gb|EFT23047.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL072PA2]
 gi|314984411|gb|EFT28503.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL005PA1]
 gi|315079593|gb|EFT51586.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL053PA2]
 gi|315081178|gb|EFT53154.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL078PA1]
 gi|315089235|gb|EFT61211.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL072PA1]
 gi|315095257|gb|EFT67233.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL038PA1]
 gi|327328479|gb|EGE70241.1| tricorn protease protein [Propionibacterium acnes HL096PA2]
 gi|327329655|gb|EGE71411.1| tricorn protease protein [Propionibacterium acnes HL096PA3]
 gi|327444266|gb|EGE90920.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL043PA2]
 gi|327444854|gb|EGE91508.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL043PA1]
 gi|327446340|gb|EGE92994.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL013PA2]
 gi|327452072|gb|EGE98726.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL092PA1]
 gi|328760009|gb|EGF73592.1| tricorn protease protein [Propionibacterium acnes HL099PA1]
          Length = 1086

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 9   PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A  F   W    + + F+            +  +  DG
Sbjct: 65  RPEVFVIDLATGDQRRLTWLGAARSFVVGWQDD-EHVVFSSPHQTNDVGLAWLYTVSLDG 123

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 124 HVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 170



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLATGDQRRLTWLGAARS 89

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G  ++           D   S  G + 
Sbjct: 90  FVVGWQDDEHVVFSSPHQTNDVGLAWLYTVSLDGHVERL----GYGPGMDLAVSSDGAVA 145

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +      +   L+ + N     ++ +GR        
Sbjct: 146 VVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAGRYSVGWIDG 205

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 206 RLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPR 252



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 90/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 23  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLATGDQRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +      +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 81  LTWLGAARSFVVGW-QDDEHVVFSSPHQTNDVGLAWLYTVSLD-GHVERLGYGPGMDL-- 136

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 137 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAG 196

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  I  +   G   R        +     P   G 
Sbjct: 197 RYSVGWIDGRLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 256

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 257 TIVY------HTHGALWRMTGLDAEPERL 279



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+    +   +  + +PD +++   S      ++
Sbjct: 351 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISH---DGRI 407

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 408 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 467

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 468 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 526

Query: 442 WVGF 445
              F
Sbjct: 527 -SPF 529



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 371 GTGEIRRIAQG---QIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 420

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 421 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 480

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER 296
            F+++GK   +   +  D   D  + DL    T+R
Sbjct: 481 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQR 515


>gi|315100378|gb|EFT72354.1| peptidase, S41 family [Propionibacterium acnes HL046PA1]
          Length = 1086

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 9   PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A  F   W    + + F+            +  +  DG
Sbjct: 65  RPEVFVIDLATGDQRRLTWLGAARSFVVGWQDD-EHVVFSSPHQTNDVGLAWLYTVSLDG 123

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 124 HVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 170



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLATGDQRRLTWLGAARS 89

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G  ++           D   S  G + 
Sbjct: 90  FVVGWQDDEHVVFSSPHQTNDVGLAWLYTVSLDGHVERL----GYGPGMDLAVSSDGAVA 145

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +      +   L+ + N     ++ +GR        
Sbjct: 146 VVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAGRYSVGWNDG 205

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 206 RLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPR 252



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 91/270 (33%), Gaps = 44/270 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 23  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLATGDQRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +      +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 81  LTWLGAARSFVVGW-QDDEHVVFSSPHQTNDVGLAWLYTVSLD-GHVERLGYGPGMDL-- 136

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPV--- 353
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++       
Sbjct: 137 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAG 196

Query: 354 -----WSPQGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SG 401
                W+  G LI  +  S +     +  I  +   G   R        +     P   G
Sbjct: 197 RYSVGWN-DGRLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPRTDG 255

Query: 402 RSLIFSRKKDGDTGSKLYSID-LNGRNETL 430
            ++++       T   L+ +  L+   E L
Sbjct: 256 TTIVY------HTHGALWRMTGLDAEPERL 279



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+    +   +  + +PD +++   S      ++
Sbjct: 351 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISH---DGRI 407

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 408 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 467

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 468 FELTRGAFDDSWPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 526

Query: 442 WVGF 445
              F
Sbjct: 527 -SPF 529



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 49/156 (31%), Gaps = 12/156 (7%)

Query: 193 LCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L V + DG   IR +   +   +     +P+  KVA  ++D     R+ ++        +
Sbjct: 364 LEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISHDG----RILIVTIADGAIRE 419

Query: 252 RIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSV---DLQS-NATERLTNTLFINIS 306
              +         +S + +  +  S        I  +   D Q       LT   F +  
Sbjct: 420 IGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSW 479

Query: 307 ASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKR 340
             ++ D   +   S R  +          +    +R
Sbjct: 480 PVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQR 515


>gi|255535315|ref|YP_003095686.1| Prolyl oligopeptidase family protein [Flavobacteriaceae bacterium
           3519-10]
 gi|255341511|gb|ACU07624.1| Prolyl oligopeptidase family protein [Flavobacteriaceae bacterium
           3519-10]
          Length = 664

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 97/284 (34%), Gaps = 28/284 (9%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS--ITGEKGDFNSRILFVSESVVSGIIK 190
           V   K +   K+   P S    AH  +D  ++      E    +  ++ VSESV +    
Sbjct: 136 VLVEKVLGKDKYADVPKS---TAHIYTDLNHRHWDYFNEGKYNHVFVVNVSESVENANDL 192

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-------YDDEDILRVYLMD 243
                 D      +      +  +    +SP+  ++ Y T       Y       ++  D
Sbjct: 193 LEGKPWDS----PQRPFGGAEDFV----WSPDSSQLLYVTKPLSGDEYAQSTNTDIFAYD 244

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRAL-ISVQKDEA----MDIYSVDLQSNATERLT 298
                      + +   + P+FS +GK  L +S+ +D       D+  +D  S     LT
Sbjct: 245 LASGATQNLTQSNKGYDVGPKFSPDGKSLLWMSMARDGYEADKNDVKIMDWNSRKVTNLT 304

Query: 299 NTLFINISA--SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                +++    ++ DS  I F +   G  QL+ +    +  ++I++  +    +     
Sbjct: 305 QNWDESVAGDVFWAQDSKTIYFSTPFRGTRQLFSLNPRNARIQQITK-GDFDVTEIHAQT 363

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           +  L+           +  +       + + E +       SPS
Sbjct: 364 KNTLLVGRTDMNHNTDLFSVDVKNGVMKQVTEVNKDNYAKISPS 407



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 58/148 (39%), Gaps = 19/148 (12%)

Query: 309 YSPDSSQIVFESD--------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +SPDSSQ+++ +         +     ++         + ++Q  +     P +SP G  
Sbjct: 213 WSPDSSQLLYVTKPLSGDEYAQSTNTDIFAYDLASGATQNLTQSNKGYDVGPKFSPDGKS 272

Query: 361 IAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDG 412
           + +   + + +      + +M  +  +   L ++ +        W+   +++ FS    G
Sbjct: 273 LLWMSMARDGYEADKNDVKIMDWNSRKVTNLTQNWDESVAGDVFWAQDSKTIYFSTPFRG 332

Query: 413 DTGSKLYSID-LNGRNETLINTPAYASD 439
               +L+S++  N R + +       ++
Sbjct: 333 TR--QLFSLNPRNARIQQITKGDFDVTE 358


>gi|196231116|ref|ZP_03129976.1| hypothetical protein CfE428DRAFT_3141 [Chthoniobacter flavus
           Ellin428]
 gi|196224946|gb|EDY19456.1| hypothetical protein CfE428DRAFT_3141 [Chthoniobacter flavus
           Ellin428]
          Length = 295

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 53/143 (37%), Gaps = 15/143 (10%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--Q 327
           ++   S + D    IY  +L  +   ++    +       SPD + + F ++        
Sbjct: 24  RKLAFS-RGDG---IYVANLDGSGARKIGTGAW----PRISPDGTHVAFNTETAKTPERH 75

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-----Q 382
           + +          +      + + PVWSP    + F+    +++ +  +  DG+     +
Sbjct: 76  IAIADVATGKTTVLPNIPGDNSYGPVWSPDSSRLIFSTMVKQEWRLAFIDADGAHFHYFE 135

Query: 383 ERLLVEDSNLQAPTWSPSGRSLI 405
            +  V  + L +  W+P G S  
Sbjct: 136 PKAKVGTAALNSMAWTPDGESFY 158



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 86/270 (31%), Gaps = 34/270 (12%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V + DG+  R +          PR SP+   VA+ T   +   R   +          
Sbjct: 34  IYVANLDGSGARKIGTG-----AWPRISPDGTHVAFNTETAKTPERHIAIADVATGKTTV 88

Query: 253 IGNFRSMIL-APRFSSNGKRALISVQKDEAMDIYSVDLQSN-----ATERLTNTLFINIS 306
           + N        P +S +  R + S    +   +  +D           +    T  +N S
Sbjct: 89  LPNIPGDNSYGPVWSPDSSRLIFSTMVKQEWRLAFIDADGAHFHYFEPKAKVGTAALN-S 147

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGS--DQKRISQDKEASYFDP----VWSPQGDL 360
            +++PD          +  E LY    +G+  DQ+ + +    + F+          G  
Sbjct: 148 MAWTPDGESFY----AQDLETLYHFALDGTVKDQRPVEKLVPNASFNSGQQFSVGADGHT 203

Query: 361 I----------AFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           +          A   + G   A+  +        R+  +      P W  S   ++ + +
Sbjct: 204 LLVDADMDENTARKDWDGPPPAVWTLDLSTMKPTRITPKGFYGWNPAW-VSESEILCNVQ 262

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                   +Y + L+G+   L+   A    
Sbjct: 263 PPKSRQRSIYRLSLDGKKRELLVKGAENPS 292


>gi|218247541|ref|YP_002372912.1| WD40 domain-containing protein [Cyanothece sp. PCC 8801]
 gi|257061123|ref|YP_003139011.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Cyanothece sp. PCC 8802]
 gi|218168019|gb|ACK66756.1| WD40 domain-containing protein [Cyanothece sp. PCC 8801]
 gi|256591289|gb|ACV02176.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Cyanothece sp. PCC 8802]
          Length = 160

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 3/118 (2%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKE 326
              +    ++ + DIY  D Q      L     ++      S S D   +VF   R+GK 
Sbjct: 41  SYIVFVSDRNGSQDIYLFDAQKRQLIALPGLNSLDEVASDPSISEDGRYLVFAMSRQGKS 100

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +Y+       ++ ++ + +A   +PV +  GD IAF      ++ I V  + G+   
Sbjct: 101 NIYLYDRQTQQKRSLTDNLQAEVRNPVINANGDRIAFEIAQDGQWDIMVYDRSGNPIT 158



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 10/123 (8%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY----FDPVWSPQGDLIAFTKFSG 368
           +S IVF SDR G + +Y+  +    ++ I+     S      DP  S  G  + F     
Sbjct: 40  ASYIVFVSDRNGSQDIYLFDAQ--KRQLIALPGLNSLDEVASDPSISEDGRYLVFAMSRQ 97

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            K  I +  +   Q+R L ++   +   P  + +G  + F   +DG     +   D +G 
Sbjct: 98  GKSNIYLYDRQTQQKRSLTDNLQAEVRNPVINANGDRIAFEIAQDGQW--DIMVYDRSGN 155

Query: 427 NET 429
             T
Sbjct: 156 PIT 158



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 49/119 (41%), Gaps = 4/119 (3%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALISVQKDEA 281
             + + + D      +YL D +  +     G  +   +   P  S +G+  + ++ +   
Sbjct: 41  SYIVFVS-DRNGSQDIYLFDAQKRQLIALPGLNSLDEVASDPSISEDGRYLVFAMSRQGK 99

Query: 282 MDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            +IY  D Q+     LT+ L   + +   + +  +I FE  ++G+  + V   +G+   
Sbjct: 100 SNIYLYDRQTQQKRSLTDNLQAEVRNPVINANGDRIAFEIAQDGQWDIMVYDRSGNPIT 158



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 32/90 (35%), Gaps = 14/90 (15%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-------PTWSPSGRSLIFSRKKDG 412
            I F         I +      Q+R L+    L +       P+ S  GR L+F+  + G
Sbjct: 42  YIVFVSDRNGSQDIYLFDA---QKRQLIALPGLNSLDEVASDPSISEDGRYLVFAMSRQG 98

Query: 413 DTGSKLYSIDLNGRNETLINTP--AYASDP 440
              S +Y  D   + +  +     A   +P
Sbjct: 99  K--SNIYLYDRQTQQKRSLTDNLQAEVRNP 126


>gi|327310716|ref|YP_004337613.1| acylamino-acid-releasing enzyme [Thermoproteus uzoniensis 768-20]
 gi|326947195|gb|AEA12301.1| acylamino-acid-releasing enzyme, putative [Thermoproteus uzoniensis
           768-20]
          Length = 567

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 89/272 (32%), Gaps = 28/272 (10%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--------FSPNQQKVAYATYDDEDI 236
            +G     L + D  G    +    R   ++ P          SP       A    ++ 
Sbjct: 18  SAGPDGAVLYLSDATGQYQIWRFDGRRHDVYIPWDGRVGGYVVSPKGAVAFSADVGGDER 77

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            R+Y+ +    R                +S +G R   +   +   D            +
Sbjct: 78  WRIYVAEGDEVRDVAV----EGFNNLGAWSPDGSRLAYTSTVERPEDFSLYVFDGGGARK 133

Query: 297 LTNTLFINISASYSPDSSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           + +   IN +  +  D   +V   ES R+G     +  ++G + K +++           
Sbjct: 134 VADLQGINAAVDW-CDEGILVEHHESSRDGD----IYLASGGEVKNLTKHSGEEVNASPR 188

Query: 355 SPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVE-DSNLQ-APTWSPSGRSLIFSRKKD 411
              G  IA+      ++  I VM     + + LV+ D  ++    W   G  L +   +D
Sbjct: 189 CLGGSKIAYLTDRWSEYRGIAVMDLKTGEAKPLVQLDREIELFDIW---GNYLAYVANED 245

Query: 412 GDTGSKLYSIDL-NGRNETLINTPAYASDPQW 442
           G +G  LY + L  G    +   P   +   W
Sbjct: 246 GYSG--LYVMHLPTGLTHKVSVPPGVVTSLSW 275



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 5/124 (4%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           ++ S  PD + +++ SD  G+ Q++        +  +    +      V SP+G  +AF+
Sbjct: 15  VAPSAGPDGA-VLYLSDATGQYQIWRFD---GRRHDVYIPWDGRVGGYVVSPKG-AVAFS 69

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              G      +   +G + R +  +       WSP G  L ++   +      LY  D  
Sbjct: 70  ADVGGDERWRIYVAEGDEVRDVAVEGFNNLGAWSPDGSRLAYTSTVERPEDFSLYVFDGG 129

Query: 425 GRNE 428
           G  +
Sbjct: 130 GARK 133


>gi|313808030|gb|EFS46511.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL087PA2]
          Length = 1086

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 9   PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A  F   W    + + F+            +  +  DG
Sbjct: 65  RPEVFVIDLATGDQRRLTWLGAARSFVVGWQDD-EHVVFSSPHQTNDVGLAWLYTVSLDG 123

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 124 HVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 170



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLATGDQRRLTWLGAARS 89

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G  ++           D   S  G + 
Sbjct: 90  FVVGWQDDEHVVFSSPHQTNDVGLAWLYTVSLDGHVERL----GYGPGMDLAVSSDGAVA 145

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +      +   L+ + N     ++ +GR        
Sbjct: 146 VVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAGRYSVGWIDG 205

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 206 RLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPR 252



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 90/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 23  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLATGDQRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +      +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 81  LTWLGAARSFVVGW-QDDEHVVFSSPHQTNDVGLAWLYTVSLD-GHVERLGYGPGMDL-- 136

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 137 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAG 196

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  I  +   G   R        +     P   G 
Sbjct: 197 RYSVGWIDGRLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 256

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 257 TIVY------HTHGALWRMTGLDAEPERL 279



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+    +   +  + +PD +++   S      ++
Sbjct: 351 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISH---DGRI 407

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 408 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 467

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 468 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 526

Query: 442 WVGF 445
              F
Sbjct: 527 -SPF 529



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 371 GTGEIRRIAQG---QIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 420

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 421 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 480

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER--LTNTLFINISAS 308
            F+++GK   +   +  D   D  + DL    T+R  L        S  
Sbjct: 481 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEASPF 529


>gi|300865361|ref|ZP_07110172.1| WD-40 repeat-containing serine/threonin protein kinase
           [Oscillatoria sp. PCC 6506]
 gi|300336664|emb|CBN55322.1| WD-40 repeat-containing serine/threonin protein kinase
           [Oscillatoria sp. PCC 6506]
          Length = 742

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 87/270 (32%), Gaps = 21/270 (7%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANI 203
             S     ++ H  +  + +++ G      S  +        SG   +++ + D     +
Sbjct: 470 TGSTDGTVRMLHLRTGKLLKTLRGHSEAVWSVAVSPDGKAIASGSADDTIKIWDLYTGKL 529

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +         +F   FSP+ + +A           V L D    R  + +    + + + 
Sbjct: 530 KRTLYGHTAGVFSVAFSPDGKAIASV----GKDKTVKLWDADTGRELETLKGHSAGVQSV 585

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDR 322
            F+ NGK    +   D  + ++  + ++    + L        S + SPD   +   S  
Sbjct: 586 AFTPNGKTLA-TGSDDGTIKLW--NWRTGKLIQTLRGHSDTVWSVAISPDGQTLASGS-- 640

Query: 323 EGKEQLYVMQSNGSDQK-------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                + +        +       R             +SP G+ +A    SG    +  
Sbjct: 641 -WDNTIKLWDLKTGTSRQPRGFLLRTLTGHLDKVQSLTFSPDGETLASGDLSGT-IKLWQ 698

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           M   G     L   S      +SP G++L+
Sbjct: 699 M-GSGGLMGTLKGHSAWVEVAFSPKGKTLV 727



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 75/216 (34%), Gaps = 17/216 (7%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            +    I    L  ++ +   + +      + +   S NG R +++   D  + +  +  
Sbjct: 426 RFPPPRIDDFALERSKENAPVRTLAFSAGPVWSVAVSPNG-RVVVTGSTDGTVRMLHL-R 483

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                + L        S + SPD   I   S     + + +        KR      A  
Sbjct: 484 TGKLLKTLRGHSEAVWSVAVSPDGKAIASGS---ADDTIKIWDLYTGKLKRTLYGHTAGV 540

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFS 407
           F   +SP G  IA     G+   + +   D  +  E L    + +Q+  ++P+G++L   
Sbjct: 541 FSVAFSPDGKAIASV---GKDKTVKLWDADTGRELETLKGHSAGVQSVAFTPNGKTLATG 597

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
                D   KL++     R   LI T    SD  W 
Sbjct: 598 SD---DGTIKLWNW----RTGKLIQTLRGHSDTVWS 626



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 50/320 (15%), Positives = 104/320 (32%), Gaps = 45/320 (14%)

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV----EF 128
           L+RS       +++   +     + P +    S   +V+VTG         +R+      
Sbjct: 437 LERS-------KENAPVRTLAFSAGPVWSVAVSPNGRVVVTGST----DGTVRMLHLRTG 485

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI-----YQSITGEKGDFNSRILFVSES 183
           +L                SP      + +  D I     Y          ++  +F    
Sbjct: 486 KLLKTLRGHSEAVWSVAVSPDGKAIASGSADDTIKIWDLYTGKLKRTLYGHTAGVFSVAF 545

Query: 184 VVSGI------IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
              G          ++ + D D              +    F+PN + +A  + D     
Sbjct: 546 SPDGKAIASVGKDKTVKLWDADTGRELETLKGHSAGVQSVAFTPNGKTLATGSDDG---- 601

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER- 296
            + L + R  +  + +      + +   S +G+    S   D  + ++  DL++  + + 
Sbjct: 602 TIKLWNWRTGKLIQTLRGHSDTVWSVAISPDGQTLA-SGSWDNTIKLW--DLKTGTSRQP 658

Query: 297 -------LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                  LT  L    S ++SPD   +    D  G  +L+ M S G      +    +++
Sbjct: 659 RGFLLRTLTGHLDKVQSLTFSPDGETLA-SGDLSGTIKLWQMGSGGLMG---TLKGHSAW 714

Query: 350 FDPVWSPQGDLIAFTKFSGE 369
            +  +SP+G  +    F   
Sbjct: 715 VEVAFSPKGKTLVSGSFDDT 734


>gi|262382557|ref|ZP_06075694.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295435|gb|EEY83366.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 492

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 72/470 (15%), Positives = 143/470 (30%), Gaps = 109/470 (23%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIG---GFFPTSIHAFVKVATN-SANYSPVSIAFTKFV 56
           M  + +      + + L  L+V           S++  + +  +      PV+IA   F 
Sbjct: 1   MERQTYTNTNRYLFLFLIALMVSCSKNDIQIAKSLNKEITIYPDYKDVTIPVNIAPLNFS 60

Query: 57  SIDEL-------GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
             D         G K    V  D     +F  I Q                + W +L   
Sbjct: 61  IADSSEHCLIIKGEKTQLQVYSD---EGLFE-IPQ----------------KRWKAL--- 97

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
                 + +   +++ +          K+I G+    +P     +  +I   I   +   
Sbjct: 98  ------LKENAGNQIELTI-------AKRIQGEWNAYTPFHMDIVNDSIDKYIAYRLLAL 144

Query: 170 KGDFNSRILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             D  +R+     ++ +          + D +  N    +      +    F    +   
Sbjct: 145 SNDMWNRMGIYQRNLENYDQSVIYENSLTDYNCVNCHTFSSGNPDKMI---FHMRGKHAG 201

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--------- 278
               D + I ++        + P+ + NF  M     +  NG     +V           
Sbjct: 202 SVLIDGKKITKLN------TKTPETVSNFVYMY----WHPNGNYLAATVCDTYQNFFINN 251

Query: 279 -------DEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESD------- 321
                  D   DI   D++ N     + L +     I  ++SPD   + F S        
Sbjct: 252 PNTLEVLDHNSDIVIYDVKKNEVFSCKALNSKDAWQIFPAFSPDGKSLYFSSTAAVDSIS 311

Query: 322 ---REGKEQLYVMQSNG-----SDQKRISQDKEASY---FDPVWSPQGDLIAFTKFSGEK 370
              R+    L  +  +        Q     +  A++     P  SP G  +AFT      
Sbjct: 312 KNFRQMTYSLCRVDFDPETRTLGQQVDTLYNGRANHKSVSFPRISPDGKYLAFTLQEYGG 371

Query: 371 F-------AIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKK 410
           F        + +++    +   L E ++ +     +WS + R L+FS ++
Sbjct: 372 FGVWHKDAELYMIRLSDGKTYPLTEANSAEGESYHSWSHNNRWLVFSSRR 421



 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 70/213 (32%), Gaps = 56/213 (26%)

Query: 289 LQSNATERL-TNTL---FINISASYSPDSSQIV----------FESDR------EGKEQL 328
           +      +L T T       +   + P+ + +           F ++       +    +
Sbjct: 205 IDGKKITKLNTKTPETVSNFVYMYWHPNGNYLAATVCDTYQNFFINNPNTLEVLDHNSDI 264

Query: 329 YVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTK----------FSGEKFAIGVM 376
            +     ++    +    K+A    P +SP G  + F+           F    +++  +
Sbjct: 265 VIYDVKKNEVFSCKALNSKDAWQIFPAFSPDGKSLYFSSTAAVDSISKNFRQMTYSLCRV 324

Query: 377 KKD------GSQERLLVEDSNLQ----APTWSPSGRSLIFSRKKDGDTG-----SKLYSI 421
             D      G Q   L            P  SP G+ L F+ ++ G  G     ++LY I
Sbjct: 325 DFDPETRTLGQQVDTLYNGRANHKSVSFPRISPDGKYLAFTLQEYGGFGVWHKDAELYMI 384

Query: 422 DL-NGRNETLINTP--------AYASDPQWVGF 445
            L +G+   L            +++ + +W+ F
Sbjct: 385 RLSDGKTYPLTEANSAEGESYHSWSHNNRWLVF 417


>gi|315087060|gb|EFT59036.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL002PA3]
          Length = 702

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 9   PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A  F   W    + + F+            +  +  DG
Sbjct: 65  RPEVFVIDLATGDQRRLTWLGAARSFVVGWQDD-EHVVFSSPHQTNDVGLAWLYTVSLDG 123

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 124 HVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 170



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLATGDQRRLTWLGAARS 89

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G  ++           D   S  G + 
Sbjct: 90  FVVGWQDDEHVVFSSPHQTNDVGLAWLYTVSLDGHVERL----GYGPGMDLAVSSDGAVA 145

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +      +   L+ + N     ++ +GR        
Sbjct: 146 VVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAGRYSVGWIDG 205

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 206 RLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPR 252



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 90/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 23  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLATGDQRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +      +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 81  LTWLGAARSFVVGW-QDDEHVVFSSPHQTNDVGLAWLYTVSLD-GHVERLGYGPGMDL-- 136

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 137 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAG 196

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  I  +   G   R        +     P   G 
Sbjct: 197 RYSVGWIDGRLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 256

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 257 TIVY------HTHGALWRMTGLDAEPERL 279



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+    +   +  + +PD +++   S      ++
Sbjct: 351 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISH---DGRI 407

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 408 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 467

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 468 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 526

Query: 442 WVGF 445
              F
Sbjct: 527 -SPF 529



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 371 GTGEIRRIAQG---QIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 420

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 421 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 480

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER--LTNTLFINISAS 308
            F+++GK   +   +  D   D  + DL    T+R  L        S  
Sbjct: 481 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEASPF 529


>gi|313811501|gb|EFS49215.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL083PA1]
          Length = 1086

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 9   PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A  F   W    + + F+            +  +  DG
Sbjct: 65  RPEVFVIDLATGDQRRLTWLGAARSFVVGWQDD-EHVVFSSPHQTNDVGLAWLYTVSLDG 123

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 124 HVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 170



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLATGDQRRLTWLGAARS 89

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G  ++           D   S  G + 
Sbjct: 90  FVVGWQDDEHVVFSSPHQTNDVGLAWLYTVSLDGHVERL----GYGPGMDLAVSSDGAVA 145

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +      +   L+ + N     ++ +GR        
Sbjct: 146 VVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAGRYSVGWIDG 205

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 206 RLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPR 252



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 90/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 23  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLATGDQRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +      +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 81  LTWLGAARSFVVGW-QDDEHVVFSSPHQTNDVGLAWLYTVSLD-GHVERLGYGPGMDL-- 136

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 137 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAG 196

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  I  +   G   R        +     P   G 
Sbjct: 197 RYSVGWIDGRLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 256

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 257 TIVY------HTHGALWRMTGLDAEPERL 279



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+    +   +  + +PD +++   S      ++
Sbjct: 351 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISH---DGRI 407

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 408 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 467

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 468 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 526

Query: 442 WVGF 445
              F
Sbjct: 527 -SPF 529



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 371 GTGEIRRIAQG---QIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 420

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 421 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 480

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER--LTNTLFINISAS 308
            F+++GK   +   +  D   D  + DL    T+R  L        S  
Sbjct: 481 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEASPF 529


>gi|313773448|gb|EFS39414.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL074PA1]
          Length = 1086

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 66/168 (39%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 9   PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A  F   W    + + F+            +  +  DG
Sbjct: 65  RPEVFVIDLATGDQRRLTWLGAARSFVVGWQDD-EHVVFSSPHQTNDVGLAWLYTVSLDG 123

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 124 HVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 170



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLATGDQRRLTWLGAARS 89

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G  ++           D   S  G + 
Sbjct: 90  FVVGWQDDEHVVFSSPHQTNDVGLAWLYTVSLDGHVERL----GYGPGMDLAVSSDGAVA 145

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +      +   L+ + N     ++ +GR        
Sbjct: 146 VVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAGRYSVGWIDG 205

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 206 RLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPR 252



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 90/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 23  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLATGDQRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +      +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 81  LTWLGAARSFVVGW-QDDEHVVFSSPHQTNDVGLAWLYTVSLD-GHVERLGYGPGMDL-- 136

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 137 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAG 196

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  I  +   G   R        +     P   G 
Sbjct: 197 RYSVGWIDGRLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 256

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 257 TIVY------HTHGALWRMTGLDAEPERL 279



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+    +   +  + +PD +++   S      ++
Sbjct: 351 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISH---DGRI 407

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 408 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 467

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 468 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 526

Query: 442 WVGF 445
              F
Sbjct: 527 -SPF 529



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 371 GTGEIRRIAQG---QIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 420

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 421 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 480

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER--LTNTLFINISAS 308
            F+++GK   +   +  D   D  + DL    T+R  L        S  
Sbjct: 481 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEASPF 529


>gi|127511424|ref|YP_001092621.1| peptidase S9 prolyl oligopeptidase [Shewanella loihica PV-4]
 gi|126636719|gb|ABO22362.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella loihica PV-4]
          Length = 675

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/278 (15%), Positives = 82/278 (29%), Gaps = 63/278 (22%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAP 250
            V  + G  +      +   +  P  SPN   +     +    ED     L     D   
Sbjct: 17  TVFAQTGKPLSVEVLWQLSRIGNPSISPNGDYIIAPVTEYDVPEDKGNTQLWLFSQDGKQ 76

Query: 251 KRIGNFRSM-ILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS-NATERLTNTLFINIS 306
           +R    + M +  P FS + K      ++  DEA  IY + +      +RLT+       
Sbjct: 77  QRALTAKGMRVSEPVFSPDSKTLAFISKRDKDEAGQIYLLPMDGPGEAQRLTDVPSGVYG 136

Query: 307 ASYSPDSSQIVFES----------------------------------------DREGKE 326
             +      + F S                                        D   + 
Sbjct: 137 LKWV--GEHLYFISSVYPGKNWKEIGEQLKADKDNKVSAHQWNALPYSSFDHWIDEGRQA 194

Query: 327 QLYVMQSNGSDQKRISQ-------DKEASYFDPVWSPQGDLIAFT-----KFSGEKFAIG 374
            ++ + + G + + I+Q                  SP    IAF           K  + 
Sbjct: 195 HVFRIAAKGGEVEAITQPLNIELPRSSQGAGSYDISPDEAWIAFNANGSDNQVNPKLDLF 254

Query: 375 VMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKK 410
           +      +   +  D+     +P +SP+G++L F+R+ 
Sbjct: 255 LAAIGSGKAENITPDNLAPDASPQFSPNGKTLAFTRQH 292



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 9/104 (8%)

Query: 350 FDPVWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGR 402
            +P  SP GD I                 + +  +DG Q+R L      +  P +SP  +
Sbjct: 38  GNPSISPNGDYIIAPVTEYDVPEDKGNTQLWLFSQDGKQQRALTAKGMRVSEPVFSPDSK 97

Query: 403 SLIFSRKKDGDTGSKLYS--IDLNGRNETLINTPAYASDPQWVG 444
           +L F  K+D D   ++Y   +D  G  + L + P+     +WVG
Sbjct: 98  TLAFISKRDKDEAGQIYLLPMDGPGEAQRLTDVPSGVYGLKWVG 141



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 57/177 (32%), Gaps = 14/177 (7%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDL-----QSNATERLT-NTLFINISASYSPDSSQIVFE 319
           S +      +    +      +DL      S   E +T + L  + S  +SP+   + F 
Sbjct: 230 SPDEAWIAFNANGSDNQVNPKLDLFLAAIGSGKAENITPDNLAPDASPQFSPNGKTLAFT 289

Query: 320 SDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                       +L +        K ++++ + S    VW+P                + 
Sbjct: 290 RQHIQGFYADTAKLMLFDLKKRSTKMLAKEWDRSVARFVWTPDSKGFYAAIDDAATRRLY 349

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
            +     + + + + +N   P  + +G  +           ++L  ++  NG+   L
Sbjct: 350 HIDAKSGKVKAITKATNFGQPAIANNGTLVA--TNDSFLYPARLVKVNGKNGKTSRL 404


>gi|284053080|ref|ZP_06383290.1| hypothetical protein AplaP_16553 [Arthrospira platensis str.
           Paraca]
          Length = 208

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 52/135 (38%), Gaps = 4/135 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDL---QSNATERLTNTLFINISASYSPDSSQIVFE 319
           P  S NG+  +    ++    ++  DL          L  +L +  S S S     IV+ 
Sbjct: 75  PALSGNGRFLVFVSNREGQNQLFLYDLRRRSYKTLVELRRSLTVMESPSLSYTGRYIVYS 134

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           ++  G+  +Y+        + +++        P  SP G  I+F      ++ I ++ + 
Sbjct: 135 ANDSGRADIYLYDRLTYRLEMLTRGYRGGVRHPHISPNGRYISFEGSRRGQWDIEIIDR- 193

Query: 380 GSQERLLVEDSNLQA 394
           G    L  E S  ++
Sbjct: 194 GPNIELDTETSLSES 208



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 52/126 (41%), Gaps = 4/126 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSP 356
           N++  +   + S +   +VF S+REG+ QL++        K + + + +      P  S 
Sbjct: 67  NSIATDEQPALSGNGRFLVFVSNREGQNQLFLYDLRRRSYKTLVELRRSLTVMESPSLSY 126

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  I ++     +  I +  +   +  +L       ++ P  SP+GR + F   + G  
Sbjct: 127 TGRYIVYSANDSGRADIYLYDRLTYRLEMLTRGYRGGVRHPHISPNGRYISFEGSRRGQW 186

Query: 415 GSKLYS 420
             ++  
Sbjct: 187 DIEIID 192



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 4/120 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRAL 273
           +P  S N + + + +  +    +++L D R       +   RS+ +  +P  S  G+  +
Sbjct: 74  QPALSGNGRFLVFVSNREGQN-QLFLYDLRRRSYKTLVELRRSLTVMESPSLSYTGRYIV 132

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            S       DIY  D  +   E LT            SP+   I FE  R G+  + ++ 
Sbjct: 133 YSANDSGRADIYLYDRLTYRLEMLTRGYRGGVRHPHISPNGRYISFEGSRRGQWDIEIID 192



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 14/116 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQ-------------ILFEPRFSPNQQKVAYATYD 232
           SG  +  + V +R+G N  +L   R +             ++  P  S   + + Y+  D
Sbjct: 78  SGNGRFLVFVSNREGQNQLFLYDLRRRSYKTLVELRRSLTVMESPSLSYTGRYIVYSAND 137

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                 +YL D    R       +R  +  P  S NG+       +    DI  +D
Sbjct: 138 SGRA-DIYLYDRLTYRLEMLTRGYRGGVRHPHISPNGRYISFEGSRRGQWDIEIID 192


>gi|67523129|ref|XP_659625.1| hypothetical protein AN2021.2 [Aspergillus nidulans FGSC A4]
 gi|40745697|gb|EAA64853.1| hypothetical protein AN2021.2 [Aspergillus nidulans FGSC A4]
 gi|259487388|tpe|CBF86026.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 1311

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 59/386 (15%), Positives = 118/386 (30%), Gaps = 84/386 (21%)

Query: 111  LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA-----HTISDDIYQS 165
            LVTG V            RLW+       + K F     +   +A       I     ++
Sbjct: 789  LVTGSV--------DCTVRLWNTTTGD--LEKTFVGHTGTVLSVAISSDGRQIVSGSIEA 838

Query: 166  -----------ITGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQ 212
                       +      F   + F  +S    +G     + + D  G  ++        
Sbjct: 839  VKLWDAATGDLLKTLASGFAGSVAFSPDSRQIAAGFKDGKIFIWDAAGT-LQKTLERHPG 897

Query: 213  ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             +    FSP+ +++   + D      +   D  I    + +G+ +  +     S +GK  
Sbjct: 898  AIMSIAFSPDVKQLVTCSTDS----TIKRWDITIGGVQEAVGHSK-HVTTMVLSPDGKVI 952

Query: 273  LISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S   D+ + ++  D  +   ++ LT  L       +S D+ QIV  S     E + + 
Sbjct: 953  A-SGSADKTIKLW--DAATGDLQKTLTGHLDTVEKVVFSLDNRQIVSCS----SEAVKIW 1005

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             +     +  S + +  +     SP G  IA    +G    I +           +    
Sbjct: 1006 DAATGKVQN-SFESDDVFTIVAVSPDGKHIASGHCNG---RIKLWDMATGSLLKTMAGYR 1061

Query: 392  LQAPT------------------------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +  +                        +SP  + ++ +     D   KL+     G  
Sbjct: 1062 SKFDSLVTTEVFDIQLQEAIFNTQITGLVFSPDAKLILSTST---DRAIKLWDA-ATGDL 1117

Query: 428  ETLIN-------TPAYASD---PQWV 443
            +  +        T A++     P W+
Sbjct: 1118 QKRLPCHSDSIITDAFSRSSGYPNWI 1143



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 81/247 (32%), Gaps = 23/247 (9%)

Query: 164 QSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           Q I        S + F S+S   V+G +  ++ + +    ++          +     S 
Sbjct: 767 QKILKGHSHECSTMAFSSDSRQLVTGSVDCTVRLWNTTTGDLEKTFVGHTGTVLSVAISS 826

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + +++         I  V L D       K + +      +  FS + ++   +  KD  
Sbjct: 827 DGRQIV-----SGSIEAVKLWDAATGDLLKTLAS--GFAGSVAFSPDSRQIA-AGFKDGK 878

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKR 340
           + I+  D      + L       +S ++SPD  Q+V  S       +       G  Q+ 
Sbjct: 879 IFIW--DAAGTLQKTLERHPGAIMSIAFSPDVKQLVTCST---DSTIKRWDITIGGVQEA 933

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWS 398
           +   K  +    V SP G +IA          I +        +  +       +   +S
Sbjct: 934 VGHSKHVTTM--VLSPDGKVIASGSADKT---IKLWDAATGDLQKTLTGHLDTVEKVVFS 988

Query: 399 PSGRSLI 405
              R ++
Sbjct: 989 LDNRQIV 995



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 80/264 (30%), Gaps = 36/264 (13%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G++ +     + + +    F P+ + +    YD      V L DT      + I +   +
Sbjct: 660 GSHPKRRYQIQQEQVKAMAFLPDSKLIISGYYDG----SVMLWDTTTGD-RQEIADHFGI 714

Query: 260 I-----------------LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                              A  FS++ K+        ++  I   D  +   +++     
Sbjct: 715 SKVNYTYLQPPEQGGYGLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHS 774

Query: 303 INIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              S  ++S DS Q+V  S       + +  +   D ++       +      S  G  I
Sbjct: 775 HECSTMAFSSDSRQLVTGSV---DCTVRLWNTTTGDLEKTFVGHTGTVLSVAISSDGRQI 831

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                SG   A+ +           +      +  +SP  R +       G    K++  
Sbjct: 832 V----SGSIEAVKLWDAATGDLLKTLASGFAGSVAFSPDSRQIA-----AGFKDGKIFIW 882

Query: 422 DLNGR-NETLINTPAYASDPQWVG 444
           D  G   +TL   P       +  
Sbjct: 883 DAAGTLQKTLERHPGAIMSIAFSP 906



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 70/241 (29%), Gaps = 46/241 (19%)

Query: 204 RYLTPSRDQILFEP--------RFSP-----NQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           R+L      +   P         FSP       + +               M+       
Sbjct: 557 RFLLRHYHTLSHWPLQIYSSAIIFSPESSVVKGENLHKVPVWLGRAPP---MEDSWTPMI 613

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-------SVDLQSNATERLTNTLFI 303
           + +      +    FS +GK+   S      + ++          L  +  +R       
Sbjct: 614 QTLTGHSEAVWRVAFSPDGKQIA-SGSDSGLIKLWDTTTGSLQKTLSGSHPKRRYQIQQE 672

Query: 304 NISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ----------------DKE 346
            + A ++ PD S+++     +G   L+   +   D++ I+                    
Sbjct: 673 QVKAMAFLPD-SKLIISGYYDGSVMLW--DTTTGDRQEIADHFGISKVNYTYLQPPEQGG 729

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSL 404
                  +S     IA   +S +   I +        + +++  + +  T  +S   R L
Sbjct: 730 YGLHAGAFSADCKQIAAFGWSRDSTCIMLFDTATGDLQKILKGHSHECSTMAFSSDSRQL 789

Query: 405 I 405
           +
Sbjct: 790 V 790


>gi|326440990|ref|ZP_08215724.1| protease [Streptomyces clavuligerus ATCC 27064]
          Length = 1056

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 88/256 (34%), Gaps = 24/256 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +     DG    +   S D  +  PR SP+   VA+ +  D        +         
Sbjct: 9   DVWAAPLDGGRA-WRVSSDDIPVDHPRISPDGTHVAWTSRRDGAPE--VHVGPLDGGPTT 65

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQKDEAMD---IYSVDLQSNATERLTNTLFINISA 307
           R+ ++ S     R ++  G+   +S Q   ++      +V L       L      +++ 
Sbjct: 66  RLTHWGSARTGVRGWTPGGEILAVSAQGQASLRRTLARAVPLDGGPAATLPYGPVGDVAH 125

Query: 308 S------YSPD-SSQIV-FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           S       S     +   ++  R G   +L++ +    +  RI +D + +   P+W   G
Sbjct: 126 SAAGVLLLSATMGREAAGWKRYRGGTAGKLWIDREGAGEFTRIHEDLDGNIEYPLWV--G 183

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           + IAF        A+     DGS  R         A   +  G  ++++         +L
Sbjct: 184 ERIAFLSDHEGVGALYSSLPDGSGLRRHTPVDGFYARHAATDGTRVVYAS------AGEL 237

Query: 419 YSIDLNGRNETLINTP 434
           + +D  G +      P
Sbjct: 238 WIVDGLGEDSEPRPVP 253



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 67/188 (35%), Gaps = 19/188 (10%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
               + + D    +++  L      R+++          SPD + + + S R+G  +++V
Sbjct: 1   MIAFTAEDD----VWAAPLDGGRAWRVSSDDIPVDHPRISPDGTHVAWTSRRDGAPEVHV 56

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERLLV 387
              +G    R++    A      W+P G+++A +              +  DG     L 
Sbjct: 57  GPLDGGPTTRLTHWGSARTGVRGWTPGGEILAVSAQGQASLRRTLARAVPLDGGPAATLP 116

Query: 388 ED--SNLQAPTW------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLI--NTPAY 436
                ++           +  GR     ++  G T  KL+ ID  G  E T I  +    
Sbjct: 117 YGPVGDVAHSAAGVLLLSATMGREAAGWKRYRGGTAGKLW-IDREGAGEFTRIHEDLDGN 175

Query: 437 ASDPQWVG 444
              P WVG
Sbjct: 176 IEYPLWVG 183



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 66/203 (32%), Gaps = 25/203 (12%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+ +    +  PR S +G     + ++D A +++   L    T RLT+          ++
Sbjct: 22  RVSSDDIPVDHPRISPDGTHVAWTSRRDGAPEVHVGPLDGGPTTRLTHWGSARTGVRGWT 81

Query: 311 PDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-- 365
           P    +   +  +    +     +  +G     +         D   S  G L+      
Sbjct: 82  PGGEILAVSAQGQASLRRTLARAVPLDGGPAATL---PYGPVGDVAHSAAGVLLLSATMG 138

Query: 366 ---------FSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDT 414
                      G    + + ++   +   + E  D N++ P W   G  + F    +G  
Sbjct: 139 REAAGWKRYRGGTAGKLWIDREGAGEFTRIHEDLDGNIEYPLWV--GERIAFLSDHEG-- 194

Query: 415 GSKLYSIDLNGRNETLINTPAYA 437
              LYS   +G      +TP   
Sbjct: 195 VGALYSSLPDGSGLRR-HTPVDG 216



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 50/315 (15%), Positives = 98/315 (31%), Gaps = 39/315 (12%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN----IR 204
           +  R+  HT  D  Y       G   +R+++ S           L ++D  G +      
Sbjct: 206 SGLRR--HTPVDGFYARHAATDG---TRVVYASA--------GELWIVDGLGEDSEPRPV 252

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP- 263
            +     +    PR       V  A  D         +   +     R G  R++ + P 
Sbjct: 253 PVRLGGQRTDLRPRIIHADHFVGSAAPDHTGRGSAVEIRGGVHWVTHREGPARALAVEPG 312

Query: 264 -------RFSSNGKRALISVQKDEAMDIYSVDLQSNAT-----ERLTNTL-FINISASYS 310
                   F ++G+  ++ V   E  D       + AT      RL        +  + +
Sbjct: 313 VRARIPRVFRADGEEHVVWVTDAEGEDALEFAPATGATAGAAPRRLGAGRLGRVLGLAVA 372

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD S+    S      ++ +++    + + + + +        +SP    +A++      
Sbjct: 373 PDGSRAAVASH---DGRVLLVERESGEIREVDRGEHGEATGLTFSPDSGWLAWSHAGPTP 429

Query: 371 FA-IGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NG 425
              + +    D S             P ++  G+ L F  ++  D     +  DL    G
Sbjct: 430 LRQLKLANTADLSVSEATPLRFRDYQPAFTLDGKHLAFLSERAFDPVYDAHVFDLAFVGG 489

Query: 426 RNETLINTPAYASDP 440
               LI   A    P
Sbjct: 490 CRPHLITLAATTPSP 504


>gi|300776940|ref|ZP_07086798.1| prolyl oligopeptidase [Chryseobacterium gleum ATCC 35910]
 gi|300502450|gb|EFK33590.1| prolyl oligopeptidase [Chryseobacterium gleum ATCC 35910]
          Length = 664

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 105/291 (36%), Gaps = 32/291 (10%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSG--IIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           +D+I  S  G+K  F+ ++L               +   +  D  N R+     +     
Sbjct: 118 ADNIVISPDGKKIAFSKQVLVEKVMGKDKFSDTPKTTAQVYTD-LNHRHWDYFNEG---- 172

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
                    V      D+      L++ +   +P+R        +   +S +  + L   
Sbjct: 173 -----KYNHVFVVNASDKVEGAKDLLEGKTWDSPQRPFGGAEDFI---WSPDSAQLLYVT 224

Query: 277 QK--------DEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESD-REG-- 324
           +             DI++ DL S  T+ LT +    +++  +SPD   ++++S  R+G  
Sbjct: 225 KPKSGKEYATSTNTDIFAYDLASGTTKNLTESNKGYDVNPKFSPDGKSLIWQSMARDGYE 284

Query: 325 --KEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             K  + ++         ++   + S    V W      I FT        +  +    +
Sbjct: 285 ADKNDVKILDWKSGKITNLTSGWDESVSGDVLWGADSKTIYFTAAFRGTKQLFSLDSKTA 344

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431
           + + + +        ++   ++ +   + D +  ++L+S+++ NG  + + 
Sbjct: 345 KVQQITKGDFDVNEIFT-DNKTSLLVGRTDINHATELFSVNIKNGEMKQVT 394



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/236 (11%), Positives = 82/236 (34%), Gaps = 30/236 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS--SNGKRA-LIS 275
            SP+ +K+A++      ++   +   +    PK      + +    +   + GK   +  
Sbjct: 123 ISPDGKKIAFSKQV---LVEKVMGKDKFSDTPKTTAQVYTDLNHRHWDYFNEGKYNHVFV 179

Query: 276 VQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDR--------EGK 325
           V   + ++     L+       +       +    +SPDS+Q+++ +             
Sbjct: 180 VNASDKVEGAKDLLEGKTWDSPQRPFGGAEDF--IWSPDSAQLLYVTKPKSGKEYATSTN 237

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDG 380
             ++         K +++  +    +P +SP G  + +   + + +      + ++    
Sbjct: 238 TDIFAYDLASGTTKNLTESNKGYDVNPKFSPDGKSLIWQSMARDGYEADKNDVKILDWKS 297

Query: 381 SQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +   L    + ++ +    W    +++ F+    G    +L+S+D        I 
Sbjct: 298 GKITNLTSGWD-ESVSGDVLWGADSKTIYFTAAFRGTK--QLFSLDSKTAKVQQIT 350


>gi|21228398|ref|NP_634320.1| hypothetical protein MM_2296 [Methanosarcina mazei Go1]
 gi|20906872|gb|AAM31992.1| conserved protein [Methanosarcina mazei Go1]
          Length = 392

 Score = 74.7 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 108/304 (35%), Gaps = 40/304 (13%)

Query: 154 IAHTISDDIYQSITGEKG------DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
               +S ++ ++     G       +  RI+++     + I      +   D +  + + 
Sbjct: 32  AGQRVSPELNETKLTTSGSAGFPDIYGDRIVYMDWRNKAEISD----IYVYDLSTGKEIK 87

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +  ++   P+      +V Y      ++  +YL +   +   +   +   +      S 
Sbjct: 88  ITTSELALNPKIY--GDRVVYCNMS-GEMSGIYLYNLSTNNETRVSTSGMGIYT----SI 140

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--- 324
            G R +  + +    DIY+ DL +    R+T      I + Y     +IV+   R G   
Sbjct: 141 YGDRIVY-LNELAGNDIYTYDLSTKKETRITTNGSAAIPSIY---GDKIVYHDWRNGFLK 196

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              +Y+   + S + RI+    A    P        I +   S  K+ I +     ++E 
Sbjct: 197 YSDIYMYDLSTSTETRITSSGSALL--PAIYDD--RIVYYDQSNGKYDIYMYDLSTNKET 252

Query: 385 LLV--EDSNLQAPTW---SPSGRSLIF---SRKKDGDTGSKLY----SIDLNGRNETLIN 432
            +   E +N   P +   +  G  +I+   S  +D   G  LY      DL+  +   I+
Sbjct: 253 KITNNETANGTHPLYGTLAMYGDRIIWLERSSVEDLQPGEDLYFNIHIYDLSTSSGVRIS 312

Query: 433 TPAY 436
           T   
Sbjct: 313 TSRD 316


>gi|166711036|ref|ZP_02242243.1| alanyl dipeptidyl peptidase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 706

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 10/115 (8%)

Query: 259 MILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASY 309
            + +P  S +G   L       +     A  ++  +L++      +RLT   +   S + 
Sbjct: 35  QVSSPTLSPDGSVVLFAKRQAKTANGTSATSLWVRNLRTRDVSPPKRLTPEGWNVNSPAL 94

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           SPD   + F S + G +QLY     G   ++++        +   SP G  I F+
Sbjct: 95  SPDGKTVYFLSSKTGSQQLYAQPMAGGTPQQLT-AFAVDVDNYKLSPDGKRIVFS 148



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 53/271 (19%), Positives = 87/271 (32%), Gaps = 45/271 (16%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   V +A    +         L V  + TR    PKR+      + +P  S
Sbjct: 36  VSSPTLSPDGSVVLFAKRQAKTANGTSATSLWVRNLRTRDVSPPKRLTPEGWNVNSPALS 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--- 323
            +GK       K  +  +Y+  +     ++LT       +   SPD  +IVF +      
Sbjct: 96  PDGKTVYFLSSKTGSQQLYAQPMAGGTPQQLTAFAVDVDNYKLSPDGKRIVFSAGVFQDC 155

Query: 324 GKEQLYVMQSNGS----DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           G +     ++ G         +  D+        W+       F        A  V+   
Sbjct: 156 GSDLGCTKKTLGELKNHTASGVVYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVVGAS 215

Query: 380 GSQERLLVED-----SNLQAPTWSPSGRSLIFS--------------RKKDG-------- 412
                L  +            TWSP G S++ S               K  G        
Sbjct: 216 AISATLAGDAPSKPFGGNDDYTWSPDGASVVASVRIPQSYGPEAGKHTKAGGKPTGNDEP 275

Query: 413 -DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             T   LY +D +G++  +  T   AS+P W
Sbjct: 276 WQTNFDLYRLDASGKSAPVNLT---ASNPAW 303



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 101/331 (30%), Gaps = 66/331 (19%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R +    S  ++Q    + G     +  +     SG++ + L V   D  N
Sbjct: 135 NYKLSPDGKRIV---FSAGVFQDCGSDLGCTKKTLGELKNHTASGVVYDQLFVRHWDTWN 191

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSM 259
                              + ++      +        ++         A          
Sbjct: 192 -------------------DGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGG 232

Query: 260 ILAPRFSSNGKRALISVQKDE-------------------------AMDIYSVDLQSNA- 293
                +S +G   + SV+  +                           D+Y +D    + 
Sbjct: 233 NDDYTWSPDGASVVASVRIPQSYGPEAGKHTKAGGKPTGNDEPWQTNFDLYRLDASGKSA 292

Query: 294 TERLT-NTLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQD 344
              LT +    +    +S D   +         FE+DR G   L  M       + I+  
Sbjct: 293 PVNLTASNPAWDAGPVFSTDGKTLYYRAKKRPGFEADRFG---LMAMDVASGKTREIAPT 349

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S  + V S  G  +  +     +  +  +     +   LV + ++ APT +  G +L
Sbjct: 350 WDRSAGEIVLSDDGSSLYTSANDLGEHPLFKIAIASGEATKLVGEGSVHAPTLA--GNTL 407

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            F+R     +G +++  D  G+    I+  A
Sbjct: 408 AFTRS-SLKSGDQVFVSDTQGQGLRAISQSA 437



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 93/308 (30%), Gaps = 61/308 (19%)

Query: 183 SVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +G    SL V +   RD +  + LTP    +   P  SP+ + V + +       + 
Sbjct: 56  KTANGTSATSLWVRNLRTRDVSPPKRLTPEGWNVN-SPALSPDGKTVYFLSSKTGS--QQ 112

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERL 297
                     P+++  F   +   + S +GKR + S  V +D   D+          +  
Sbjct: 113 LYAQPMAGGTPQQLTAFAVDVDNYKLSPDGKRIVFSAGVFQDCGSDLGCTKKTLGELKNH 172

Query: 298 TNTLFINISA------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----- 346
           T +  +          +++      +F ++             G+     +   +     
Sbjct: 173 TASGVVYDQLFVRHWDTWNDGRRNTLFVAE---LPAAGAKAVVGASAISATLAGDAPSKP 229

Query: 347 -ASYFDPVWSPQGDLIAFTKFSG-------------------------EKFAIGVMKKDG 380
                D  WSP G  +  +                               F +  +   G
Sbjct: 230 FGGNDDYTWSPDGASVVASVRIPQSYGPEAGKHTKAGGKPTGNDEPWQTNFDLYRLDASG 289

Query: 381 -SQERLLV--EDSNLQAPTWSPSGRSLIF-SRKKDGDTGSK--LYSIDLNGRNETLINTP 434
            S    L     +    P +S  G++L + ++K+ G    +  L ++D+       I   
Sbjct: 290 KSAPVNLTASNPAWDAGPVFSTDGKTLYYRAKKRPGFEADRFGLMAMDVASGKTREIA-- 347

Query: 435 AYASDPQW 442
                P W
Sbjct: 348 -----PTW 350


>gi|5669531|gb|AAD46375.1|AF162663_2 AglU [Myxococcus xanthus DK 1622]
          Length = 476

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 56/329 (17%), Positives = 116/329 (35%), Gaps = 48/329 (14%)

Query: 137 KQIIGKKFFSSPAS--WRKIAHTISDDIYQSITGEKG-----DFNSRILFVSESVVSGII 189
           + ++G+ +         RK+         + +T   G       +  +LF++    +   
Sbjct: 97  QMVLGELYAVPVEGGEPRKLG--------EGVTNVPGGQLVAPGSKYVLFLTGYNPA-TH 147

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             +L V   D A    +          P  SP+  K+AY      D  ++ L        
Sbjct: 148 SGALNVASLDDAKAAPVVLGTAVSYMLP--SPDGTKLAYV-----DGGKLKLGTLPSGPF 200

Query: 250 PKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                +  + +   +F+ +GK  L    +     M   SV+       ++ + +  +   
Sbjct: 201 ----TDVAAEVRTAQFTPDGKTLLFKRRLSAAGGMAAISVEKPDAPPMKVGDQVG-DYE- 254

Query: 308 SYSPDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             SPD  ++ F+   E   G   LY+ +      KR++     +     +SP G  +A T
Sbjct: 255 -VSPDGQRVAFQVRSESVRGLYDLYLAELPELKAKRLA----VASGVFAFSPDGKWLART 309

Query: 365 KFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +         + +    G   R L     ++   +SP  +++ F  K D    + L S+ 
Sbjct: 310 ENGKPNVPGDLYMGPAAGGAGRKL--GVQVEKLAFSPDSQAVGFLEKYDSTANAGLMSVA 367

Query: 423 L--NGRNET---LINTPAYASDPQWVGFM 446
              +G  +     +    + SD ++V F+
Sbjct: 368 ALPDGTTKQVGGRVPNFVWGSDGRYVAFL 396



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 73/216 (33%), Gaps = 30/216 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---S 275
           F+P+ + + +            +   + D  P ++G+          S +G+R      S
Sbjct: 212 FTPDGKTLLFKRRLSAAGGMAAISVEKPDAPPMKVGDQVGDY---EVSPDGQRVAFQVRS 268

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----LYVM 331
                  D+Y  +L     +RL     +    ++SPD   +       GK      LY+ 
Sbjct: 269 ESVRGLYDLYLAELPELKAKRLAVASGV---FAFSPDGKWLA--RTENGKPNVPGDLYMG 323

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK----KDGSQERLLV 387
            + G   +++            +SP    + F +        G+M      DG+ +++  
Sbjct: 324 PAAGGAGRKL----GVQVEKLAFSPDSQAVGFLEKYDSTANAGLMSVAALPDGTTKQV-- 377

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               +    W   GR + F  +         YS+DL
Sbjct: 378 -GGRVPNFVWGSDGRYVAFLSRILKPA----YSVDL 408



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 94/289 (32%), Gaps = 24/289 (8%)

Query: 171 GDFNSRILFVSESVVSGIIKN----SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           G F + ++   +  + GI        L  +  +G   R L      +      +P  + V
Sbjct: 77  GRFATYLVNGQKPRLDGIPPQMVLGELYAVPVEGGEPRKLGEGVTNVPGGQLVAPGSKYV 136

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            + T  +       L    +D A        + +     S +G +          + + +
Sbjct: 137 LFLTGYNPATHSGALNVASLDDAKAAPVVLGTAVSYMLPSPDGTKLAYV--DGGKLKLGT 194

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +          T+      +A ++PD   ++F+        +  +     D   +    +
Sbjct: 195 LPSG-----PFTDVAAEVRTAQFTPDGKTLLFKRRLSAAGGMAAISVEKPDAPPMKVGDQ 249

Query: 347 ASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGR 402
              ++   SP G  +AF   S      + + + +  +   +RL V         +SP G+
Sbjct: 250 VGDYE--VSPDGQRVAFQVRSESVRGLYDLYLAELPELKAKRLAVASGVF---AFSPDGK 304

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP----AYASDPQWVGFMD 447
            L  +     +    LY     G     +       A++ D Q VGF++
Sbjct: 305 WLARTENGKPNVPGDLYMGPAAGGAGRKLGVQVEKLAFSPDSQAVGFLE 353



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 52/153 (33%), Gaps = 12/153 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A       ++     M      A +++G     +    FS + +      +
Sbjct: 298 AFSPDGKWLARTENGKPNVPGDLYMGPAAGGAGRKLGVQVEKL---AFSPDSQAVGFLEK 354

Query: 278 KDEAMDIYSVDLQ---SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV-MQS 333
            D   +   + +       T+++        +  +  D   + F S R  K    V +  
Sbjct: 355 YDSTANAGLMSVAALPDGTTKQV---GGRVPNFVWGSDGRYVAFLS-RILKPAYSVDLML 410

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
               ++R ++ ++   F   ++P    + F   
Sbjct: 411 YTLGEERAAKVQQG-VFGYGFTPGNGQVVFRSN 442


>gi|145550147|ref|XP_001460752.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124428583|emb|CAK93355.1| unnamed protein product [Paramecium tetraurelia]
          Length = 803

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 85/240 (35%), Gaps = 23/240 (9%)

Query: 195 VMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +   D  N++Y       +  + +  FS +   +A  +YD    L + L D++       
Sbjct: 463 IYLWDLINVQYKGKLNGHNNSVIQVCFSSDGNTLASCSYD----LLICLWDSKSQLQNGY 518

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSP 311
           +      +    FS +G     S   D+++ ++  D+++       N     + S  +SP
Sbjct: 519 LYGHNDWVNTVCFSPDGNTLA-SGSYDQSLRLW--DIKTGQQTAKFNGHSDTVRSVCFSP 575

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I   SD    E + +       Q        +      +SP G  +A   F     
Sbjct: 576 DGKTIASGSD---DESIRLWNVKTKQQIAKLDAHTSGISSVYFSPNGTTLASCSFDQS-- 630

Query: 372 AIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            I +      Q++  ++D   +  +  +SP G +L +     G     +  +D+    + 
Sbjct: 631 -IRIWDVMTQQQKASIDDCACEILSVCFSPDGTTLAY-----GGKDKSICLMDIMTGQQK 684



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 71/193 (36%), Gaps = 14/193 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +C+ D             +  +    FSP+   +A  +YD      + L D +  +   +
Sbjct: 505 ICLWDSKSQLQNGYLYGHNDWVNTVCFSPDGNTLASGSYDQ----SLRLWDIKTGQQTAK 560

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSP 311
                  + +  FS +GK    S   DE++ ++  ++++     +L        S  +SP
Sbjct: 561 FNGHSDTVRSVCFSPDGKTIA-SGSDDESIRLW--NVKTKQQIAKLDAHTSGISSVYFSP 617

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           + + +   S     + + +       QK    D         +SP G  +A+    G+  
Sbjct: 618 NGTTLASCSF---DQSIRIWDVMTQQQKASIDDCACEILSVCFSPDGTTLAY---GGKDK 671

Query: 372 AIGVMKKDGSQER 384
           +I +M     Q++
Sbjct: 672 SICLMDIMTGQQK 684



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 69/205 (33%), Gaps = 25/205 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+   +A  + D  + +R++                RS IL+  FS +G     S   
Sbjct: 413 YSPDGTTLASGSDD--NTIRIWDFK----------SQQRSQILSVCFSPDGTTLAFSSDD 460

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +       +++Q     +L       I   +S D + +   S       + +  S    Q
Sbjct: 461 NSIYLWDLINVQYKG--KLNGHNNSVIQVCFSSDGNTLASCSY---DLLICLWDSKSQLQ 515

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPT 396
                          +SP G+ +A   +      + +      Q+       +   ++  
Sbjct: 516 NGYLYGHNDWVNTVCFSPDGNTLASGSYDQS---LRLWDIKTGQQTAKFNGHSDTVRSVC 572

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
           +SP G+++        D   +L+++
Sbjct: 573 FSPDGKTIASGSD---DESIRLWNV 594



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 84/253 (33%), Gaps = 50/253 (19%)

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF------SSPASWR---K 153
           W+ +  Q    G++       ++V F      D   +    +        S +  +    
Sbjct: 466 WDLINVQY--KGKLNGHNNSVIQVCFS----SDGNTLASCSYDLLICLWDSKSQLQNGYL 519

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
             H   D +        G           ++ SG    SL + D                
Sbjct: 520 YGHN--DWVNTVCFSPDG----------NTLASGSYDQSLRLWDIKTGQQTAKFNGHSDT 567

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +    FSP+ + +A  + D+     + L + +  +   ++    S I +  FS NG    
Sbjct: 568 VRSVCFSPDGKTIASGSDDE----SIRLWNVKTKQQIAKLDAHTSGISSVYFSPNGTTLA 623

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINI------SASYSPDSSQIVFESDREGKEQ 327
            S   D+++ I+  D+ +   +       I+       S  +SPD + + +     GK++
Sbjct: 624 -SCSFDQSIRIW--DVMTQQQK-----ASIDDCACEILSVCFSPDGTTLAY----GGKDK 671

Query: 328 -LYVMQSNGSDQK 339
            + +M      QK
Sbjct: 672 SICLMDIMTGQQK 684


>gi|116622762|ref|YP_824918.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225924|gb|ABJ84633.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 841

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/232 (18%), Positives = 74/232 (31%), Gaps = 19/232 (8%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--SMILAPRFS 266
                 F PR SP+ Q +A+    D       +           + + +    I    +S
Sbjct: 317 GGPAQAFGPRVSPDGQTIAFQAMVDGQTQVAIMKP--ESGNWTVLTHQKNLGQIQDITWS 374

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G +       D    ++SV L    + R+          S   D S +V   + +   
Sbjct: 375 RDGSKLYFDRVTDTPRGVFSVPLLGGESRRVLEYGSY---PSVLADGSLVVGMINPQRIL 431

Query: 327 QLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAF------TKFSGEKFAIGVMKKD 379
           QL+           +    + AS      +P G  I F       K +     I  +  D
Sbjct: 432 QLHRYWPESGKLVPLPGVPDTASAAAGRATPDGKSIVFYGNPLDAKGNQGPRGIYSLDPD 491

Query: 380 GSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             +   L     L        +P G+S+++S    G   S + S+  NG  E
Sbjct: 492 SGRLLNLAPGQRLDGALALAATPDGKSVVYST--QGRDFSSVISVPRNGSGE 541



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 72/221 (32%), Gaps = 13/221 (5%)

Query: 221 PNQQKVAYA-----TYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALI 274
           P+ + + +         ++    +Y +D    R      G      LA   + +GK  + 
Sbjct: 462 PDGKSIVFYGNPLDAKGNQGPRGIYSLDPDSGRLLNLAPGQRLDGALALAATPDGKSVVY 521

Query: 275 SVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           S Q  +   + SV         +L     I +    +PD S  ++         +     
Sbjct: 522 STQGRDFSSVISVPRNGSGEMRQLFTMTNIPLFLDAAPDGS--IYADQLSHDTMILRYPP 579

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +G   +R++Q    +    V  P G  + +   SG K    +++ DG+   L+       
Sbjct: 580 SGGIPERLTQLHGGAAVSLVL-PDGRPLVY-SVSGFKRRFQIVQPDGTLAPLIESSEECG 637

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            P        +     +       + SI  +GR    +  P
Sbjct: 638 MPAALVGEDRVAVLTDRK-PIQIAIVSI-ADGRIMQRVTGP 676



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 5/93 (5%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWS 398
           S    A  F P  SP G  IAF      +  + +MK +     +L        +Q  TWS
Sbjct: 315 SLGGPAQAFGPRVSPDGQTIAFQAMVDGQTQVAIMKPESGNWTVLTHQKNLGQIQDITWS 374

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             G  L F R  D   G  ++S+ L G     +
Sbjct: 375 RDGSKLYFDRVTDTPRG--VFSVPLLGGESRRV 405



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 66/182 (36%), Gaps = 20/182 (10%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V   DG  ++ +T  +D++      S + + + Y++        ++ +       P+++ 
Sbjct: 662 VSIADGRIMQRVTGPKDRLTSLSS-SLDGKTLYYSSAGF-----IWSIPIE-GGEPRQLA 714

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-----NTLFINISASY 309
              ++        NG+  ++S+Q  +A+ +  + +      R+            + AS 
Sbjct: 715 AGDNVSADA----NGRDLIVSLQDKDAIRLLRMPVSGGTPLRIPLSGELRIPGTLLRASI 770

Query: 310 SPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
                 I      SDR    Q  ++       +RI  + +     P W+  G L++    
Sbjct: 771 VGPGGLIAVTTASSDR-WMYQTGLLDPRTGALRRIPLNFDGETQWPGWTRDGKLVSIGTV 829

Query: 367 SG 368
            G
Sbjct: 830 IG 831



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/231 (10%), Positives = 58/231 (25%), Gaps = 23/231 (9%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + + Y+    +   ++     + D     +         P       R  +   +  
Sbjct: 601 PDGRPLVYSVSGFKRRFQI----VQPDGTLAPLIESSEECGMPAALVGEDRVAVLTDRKP 656

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
                         +R+T       S S S D   + + S       ++ +   G + ++
Sbjct: 657 IQIAIVSIADGRIMQRVTGPKDRLTSLSSSLDGKTLYYSS----AGFIWSIPIEGGEPRQ 712

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----- 395
           ++     S         G  +  +    +   +  M   G     +     L+ P     
Sbjct: 713 LAAGDNVSADA-----NGRDLIVSLQDKDAIRLLRMPVSGGTPLRIPLSGELRIPGTLLR 767

Query: 396 --TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYASDPQW 442
                P G  +  +         +   +D        I          P W
Sbjct: 768 ASIVGP-GGLIAVTTASSDRWMYQTGLLDPRTGALRRIPLNFDGETQWPGW 817


>gi|326390268|ref|ZP_08211828.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Thermoanaerobacter ethanolicus JW 200]
 gi|325993713|gb|EGD52145.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Thermoanaerobacter ethanolicus JW 200]
          Length = 667

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/217 (21%), Positives = 78/217 (35%), Gaps = 40/217 (18%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            E  L  Y  +       ++  N    +     S +GK+ L S+        Y  DL ++
Sbjct: 116 PEKGLFEYNKNGFRQIVGEKSKNVPIGVGDVAVSPDGKKLLYSL----NYQYYIKDLSTD 171

Query: 293 ATERLT-NTLFINI---SASYSPDSSQIVFESD----REG------KEQLYVMQSNGSDQ 338
            TE++      ++I   S S+SPD ++I+F  +    REG      K  L+      S  
Sbjct: 172 KTEKIRVTGNGLDIFYESPSFSPDGNKIIFTKNVYTPREGGHGFEKKATLWEYDLKTSQL 231

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             I++    SY         + I F K +     I        +E+ + E      P+ S
Sbjct: 232 TEIAEGSYGSYVKNQ-----NAIVFEKDN----KIIYKDLKTGEEKTVDEGR---FPSVS 279

Query: 399 PSGRSLIFS------RKKDG----DTGSKLYSIDLNG 425
           P G  + +          DG    +  S ++  D  G
Sbjct: 280 PDGNYIAYVKSEIKNSTIDGVEVKEDISNVWVTDAVG 316



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 81/250 (32%), Gaps = 52/250 (20%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYAT---------YDDEDILRVYLMDTRIDRAPKRI 253
           IR      D     P FSP+  K+ +           +  E    ++  D +  +  +  
Sbjct: 176 IRVTGNGLDIFYESPSFSPDGNKIIFTKNVYTPREGGHGFEKKATLWEYDLKTSQLTEIA 235

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                  +         +  I  +KD    I   DL++   + +    F     S SPD 
Sbjct: 236 EGSYGSYV-------KNQNAIVFEKD--NKIIYKDLKTGEEKTVDEGRF----PSVSPDG 282

Query: 314 SQIVFE------SDREGKE------QLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDL 360
           + I +       S  +G E       ++V  + G + +K++++    ++  P       L
Sbjct: 283 NYIAYVKSEIKNSTIDGVEVKEDISNVWVTDAVGFATKKQVTE----NFSKPNL---KSL 335

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK--- 417
           +   K   +   I      G +        +   P+WS    S+   +  + D       
Sbjct: 336 VESVKEKNKNSPIKSDLVTGGE-------YDYYLPSWSNDSNSIYVLKNLNEDVRGNMMT 388

Query: 418 LYSIDLNGRN 427
           L  IDL+   
Sbjct: 389 LMKIDLSKEK 398



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 13/108 (12%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL---QAPTWS 398
           S++      D   SP G  + ++     ++ I  +  D +++  +  +      ++P++S
Sbjct: 136 SKNVPIGVGDVAVSPDGKKLLYSL--NYQYYIKDLSTDKTEKIRVTGNGLDIFYESPSFS 193

Query: 399 PSGRSLIFSRK----KDGDTGSK----LYSIDLNGRNETLINTPAYAS 438
           P G  +IF++     ++G  G +    L+  DL     T I   +Y S
Sbjct: 194 PDGNKIIFTKNVYTPREGGHGFEKKATLWEYDLKTSQLTEIAEGSYGS 241


>gi|212637533|ref|YP_002314058.1| transcriptional regulator [Shewanella piezotolerans WP3]
 gi|212559017|gb|ACJ31471.1| Transcriptional regulatory protein [Shewanella piezotolerans WP3]
          Length = 662

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 52/308 (16%), Positives = 119/308 (38%), Gaps = 19/308 (6%)

Query: 125 RVEFRLW-DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           +V ++L  DV     +  ++  +       I  T++++  Q I   +      I  V   
Sbjct: 68  KVGYKLVADVTVLNALTTEQQATLQNEPALIQATVANEERQIIGVMRWLAYLVIASVFIF 127

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
               +  +   +     ANI+ LT  +  I   P  S       Y   +   + ++ L +
Sbjct: 128 GWRYLQHDKQQLAP---ANIQRLTHDK-AINIMPTQSHQGDSFVYIAAEQGAVDQLMLRE 183

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRA-LISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            +    PKR+G+  S    P FS N KR   I+ Q ++   I      +  ++ +     
Sbjct: 184 -KTQTFPKRLGSTSSYSY-PVFSPNDKRIAAIAQQPNQQFAIEIFTADNRQSQSVIPLEA 241

Query: 303 INISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGD 359
           ++   S+ P ++ + +   +   G   + +   +      +++    ++   P++SP GD
Sbjct: 242 VSHGLSWHPTANMLAYSQPTSPNGNHSIQLWDQDKHQATTLTEAIPGAHDTKPIFSPSGD 301

Query: 360 LIAFTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            + F +  + ++ AI      G+  ++    S++   +W    + L+            L
Sbjct: 302 RLVFQRQIAFKEHAIFSSDLAGNSHKVSHYFSDILGVSWLNDEQLLV-------SLNKGL 354

Query: 419 YSIDLNGR 426
           +++ L+G 
Sbjct: 355 FTLSLSGE 362



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 105/313 (33%), Gaps = 36/313 (11%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
              + ++   +  +E    D +  + +I  +  S   SW   A+ ++             
Sbjct: 210 IAAIAQQPNQQFAIEIFTADNRQSQSVIPLEAVSHGLSWHPTANMLA------------- 256

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFSPNQQKVAYATY 231
                 +   +  +G     L   D+D      LT +       +P FSP+  ++ +   
Sbjct: 257 ------YSQPTSPNGNHSIQLW--DQDKHQATTLTEAIPGAHDTKPIFSPSGDRLVFQRQ 308

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                  ++  D   +    ++ ++ S IL   + ++ ++ L+S+ K     ++++ L S
Sbjct: 309 IAFKEHAIFSSDLAGNSH--KVSHYFSDILGVSWLND-EQLLVSLNKG----LFTLSL-S 360

Query: 292 NATERLTNTL---FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                 ++T      +I     P  +  +F S R  + Q  +        +      +A 
Sbjct: 361 GEIAPWSSTEVVGAQDIDHH--PQQASSLF-SKRTRRHQNLIYDFTSQPSRFALTRSDAD 417

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            +    SP     AF      + ++     D        E S +   +WS          
Sbjct: 418 DYAANISPDTKHFAFVSDRSGQKSLWFRSSDQLTRIEGSEFSEIFDISWSADSSHFSAVV 477

Query: 409 KKDGDTGSKLYSI 421
           K  G  G  +Y++
Sbjct: 478 KDQGRYGLLIYAV 490


>gi|16331781|ref|NP_442509.1| hypothetical protein slr0505 [Synechocystis sp. PCC 6803]
 gi|1001742|dbj|BAA10579.1| slr0505 [Synechocystis sp. PCC 6803]
          Length = 190

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 3/136 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFE 319
           P  S +G+   +   ++   +I   DL++N    L      N    S S S     +V+ 
Sbjct: 51  PSLSGDGRWLALVSNRNGTREILVYDLRNNQLVNLPGLNQANTIAESPSLSRTGRYLVYL 110

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S  +G+  + +          ++ +      +P  SP G  I F      ++ I ++ + 
Sbjct: 111 SSIQGRPDIALYDRLTKKTDLLTLNYRQWVRNPRISPDGRYIVFETAKRGQWDIEILDRG 170

Query: 380 GSQERLLVEDSNLQAP 395
              E  + E + +++P
Sbjct: 171 PQIELDIAEGAPVESP 186



 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 4/124 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSP 356
           N+ F +   S S D   +   S+R G  ++ V     +    +    +A+     P  S 
Sbjct: 43  NSRFNDEQPSLSGDGRWLALVSNRNGTREILVYDLRNNQLVNLPGLNQANTIAESPSLSR 102

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDT 414
            G  + +      +  I +  +   +  LL  +       P  SP GR ++F   K G  
Sbjct: 103 TGRYLVYLSSIQGRPDIALYDRLTKKTDLLTLNYRQWVRNPRISPDGRYIVFETAKRGQW 162

Query: 415 GSKL 418
             ++
Sbjct: 163 DIEI 166



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRAL 273
           +P  S + + +A  +  +     + + D R ++     G  ++  +A  P  S  G+  +
Sbjct: 50  QPSLSGDGRWLALVSNRNG-TREILVYDLRNNQLVNLPGLNQANTIAESPSLSRTGRYLV 108

Query: 274 ISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                    DI   D  +  T+ LT N      +   SPD   IVFE+ + G+  + ++ 
Sbjct: 109 YLSSIQGRPDIALYDRLTKKTDLLTLNYRQWVRNPRISPDGRYIVFETAKRGQWDIEILD 168



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 5/98 (5%)

Query: 195 VMDRDGANIRYL----TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           ++  D  N + +        + I   P  S   + + Y +        + L D    +  
Sbjct: 72  ILVYDLRNNQLVNLPGLNQANTIAESPSLSRTGRYLVYLSSIQGRP-DIALYDRLTKKTD 130

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
               N+R  +  PR S +G+  +    K    DI  +D
Sbjct: 131 LLTLNYRQWVRNPRISPDGRYIVFETAKRGQWDIEILD 168



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 10/114 (8%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTW 397
           S +   +   P  S  G  +A          I V     +Q   L      ++  ++P+ 
Sbjct: 41  SLNSRFNDEQPSLSGDGRWLALVSNRNGTREILVYDLRNNQLVNLPGLNQANTIAESPSL 100

Query: 398 SPSGRSLIFSRKKDGDTGSKLYS-----IDLNGRNETL-INTPAYASDPQWVGF 445
           S +GR L++     G     LY       DL   N    +  P  + D +++ F
Sbjct: 101 SRTGRYLVYLSSIQGRPDIALYDRLTKKTDLLTLNYRQWVRNPRISPDGRYIVF 154


>gi|16331616|ref|NP_442344.1| hypothetical protein slr0195 [Synechocystis sp. PCC 6803]
 gi|1001679|dbj|BAA10414.1| slr0195 [Synechocystis sp. PCC 6803]
          Length = 183

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 3/113 (2%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQL 328
            + +  ++    IY  +LQ+N  E L     ++      + + D   IVF   R+GK  +
Sbjct: 66  LVFTSDRNGTQGIYLYNLQNNRLETLPRLNALDQVASHPTITEDGRYIVFALSRQGKTDI 125

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +       ++ ++ D  A   +PV +  GD IAF      ++ I VM   G 
Sbjct: 126 VLYDRQTEQKRNLTADLAADTRNPVINANGDRIAFEVAQDGQWDIMVMDAQGK 178



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 9/123 (7%)

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +VF SDR G + +Y+     +  + + +    +     P  +  G  I F      K  I
Sbjct: 66  LVFTSDRNGTQGIYLYNLQNNRLETLPRLNALDQVASHPTITEDGRYIVFALSRQGKTDI 125

Query: 374 GVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +  +   Q+R L  D  ++ + P  + +G  + F   +DG     +  +D  G+   +I
Sbjct: 126 VLYDRQTEQKRNLTADLAADTRNPVINANGDRIAFEVAQDGQW--DIMVMDAQGK---II 180

Query: 432 NTP 434
            TP
Sbjct: 181 TTP 183



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPK--RIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + + + D      +YL + + +R     R+     +   P  + +G+  + ++ +    D
Sbjct: 66  LVFTS-DRNGTQGIYLYNLQNNRLETLPRLNALDQVASHPTITEDGRYIVFALSRQGKTD 124

Query: 284 IYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           I   D Q+     LT  L  +  +   + +  +I FE  ++G+  + VM + G
Sbjct: 125 IVLYDRQTEQKRNLTADLAADTRNPVINANGDRIAFEVAQDGQWDIMVMDAQG 177



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 17/147 (11%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR-- 210
           +  ++ S++I+  +T     F S       +   GI   +L        N R  T  R  
Sbjct: 48  RGVNSASEEIFPQVTYPFLVFTS-----DRNGTQGIYLYNL-------QNNRLETLPRLN 95

Query: 211 --DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             DQ+   P  + + + + +A         + L D + ++      +  +    P  ++N
Sbjct: 96  ALDQVASHPTITEDGRYIVFALSRQGKT-DIVLYDRQTEQKRNLTADLAADTRNPVINAN 154

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE 295
           G R    V +D   DI  +D Q     
Sbjct: 155 GDRIAFEVAQDGQWDIMVMDAQGKIIT 181



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 4/85 (4%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQ----ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            + FT        I +     ++     RL   D     PT +  GR ++F+  + G T 
Sbjct: 65  FLVFTSDRNGTQGIYLYNLQNNRLETLPRLNALDQVASHPTITEDGRYIVFALSRQGKTD 124

Query: 416 SKLYSIDLNGRNETLINTPAYASDP 440
             LY      +     +  A   +P
Sbjct: 125 IVLYDRQTEQKRNLTADLAADTRNP 149


>gi|186680698|ref|YP_001863894.1| heat shock protein DnaJ domain-containing protein [Nostoc
           punctiforme PCC 73102]
 gi|186463150|gb|ACC78951.1| heat shock protein DnaJ domain protein [Nostoc punctiforme PCC
           73102]
          Length = 492

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 97/284 (34%), Gaps = 17/284 (5%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
             ++T     F + I    +++ SG   N++ +   D   + +   S  + +    FSP+
Sbjct: 203 VHTLTHLNWVFTTAISPDGKTLASGSSDNTIKIWHLDTGKLLHTLTSHTKWVRCLAFSPD 262

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            Q +   + D      + +      +  K +    + + +   S +G+  L S   D  +
Sbjct: 263 SQTLVSGSDDS----TLMIWQVSTGKLLKTLKVHSTPVFSVIISPDGQTIL-SGGTDSTI 317

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I  +++     + L     +  S +  P   Q +F S       + +     +   +  
Sbjct: 318 KISHIEM-GQLLQVLKGHSGLVYSLAICP--KQQIFVSG-GADNTIKLWNLKSNKLLQTL 373

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPS 400
                       SP G ++A + +      I +   +  +    +    S + A  +SP 
Sbjct: 374 NGHSGWVMCVAISPDGKILASSSYDQT---IKLWNINTGKVINTLAGHCSYVCAIAFSPV 430

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           G+ L        D   KL+ ++      TL N   + +   +  
Sbjct: 431 GQYLA---SGSADHSVKLWDVNTGQELYTLNNHSDWVNSVTFSP 471



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 69/187 (36%), Gaps = 11/187 (5%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSL 193
           D + I+         S  KI+H     + Q + G  G   S  +   + + VSG   N++
Sbjct: 304 DGQTILS----GGTDSTIKISHIEMGQLLQVLKGHSGLVYSLAICPKQQIFVSGGADNTI 359

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            + +     +          +     SP+ + +A ++YD      + L +    +    +
Sbjct: 360 KLWNLKSNKLLQTLNGHSGWVMCVAISPDGKILASSSYDQ----TIKLWNINTGKVINTL 415

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
               S + A  FS  G+    S   D ++ ++ V+        L N      S ++SPDS
Sbjct: 416 AGHCSYVCAIAFSPVGQYLA-SGSADHSVKLWDVN-TGQELYTLNNHSDWVNSVTFSPDS 473

Query: 314 SQIVFES 320
             +   S
Sbjct: 474 KTLASGS 480



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 6/132 (4%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           S+ + Q++ G  G      +     +  S     ++ + + +   +          +   
Sbjct: 366 SNKLLQTLNGHSGWVMCVAISPDGKILASSSYDQTIKLWNINTGKVINTLAGHCSYVCAI 425

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP  Q +A  + D      V L D    +    + N    + +  FS + K    S  
Sbjct: 426 AFSPVGQYLASGSADH----SVKLWDVNTGQELYTLNNHSDWVNSVTFSPDSKTLA-SGS 480

Query: 278 KDEAMDIYSVDL 289
           +D  + ++  D+
Sbjct: 481 RDMTIKLWQCDI 492


>gi|290954958|ref|YP_003486140.1| hypothetical protein SCAB_3601 [Streptomyces scabiei 87.22]
 gi|260644484|emb|CBG67569.1| putative WD-40 repeat protein [Streptomyces scabiei 87.22]
          Length = 1210

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 49/343 (14%), Positives = 105/343 (30%), Gaps = 38/343 (11%)

Query: 83   SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
             + +   +     +   F      G        V +    R  V  +LWD +   +    
Sbjct: 863  PRTTLAGRPGTSVTDLAF------GPDARTVSTVGQGPPGRAAV--QLWDARTGDRRATL 914

Query: 143  KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
                +PA  R+        +  +     G   ++ + V+    +G  +        D   
Sbjct: 915  PLDRNPA--RRGGDLPITVLRPAAL---GFAPNKDVLVARVGENGKAEIR------DVGT 963

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             R         L +P FSP+ + +A+      +   + +                  +  
Sbjct: 964  GRLRQSRAVGSLDKPVFSPDGRLLAFV----GNGGALRMWHLSTGALRTLRTGGTQSVRT 1019

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--YSPDSSQIVFES 320
              F+ + +   +   + +   I  +D  +   +R T    +  S S  +SPD   +   S
Sbjct: 1020 VLFAPDSRTLAVLTVEADGDRITLLDAATGRAQR-TVEPSVRTSLSLAFSPDGRTLAAAS 1078

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                   +    +     +  S   +       +   G  +A    +G    +G+     
Sbjct: 1079 S---GGSVKTWDARTGGLQD-SFRADGEVRSLAFGSDGRTLALGTTTG----VGLWDLTT 1130

Query: 381  SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +Q+R  V    + A  + P G +L  +          L++IDL
Sbjct: 1131 AQKRAAVPTRPVAAVAFGPDGYTLAIAT----GNSVALWNIDL 1169



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 85/248 (34%), Gaps = 20/248 (8%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++ V D          P+ D  +    FSP+   VA A         V + D    R   
Sbjct: 641 TIGVWDATTGTRISTLPAADGAVIGMAFSPDGHTVAAAY-----PSAVRVWDVATGRVRH 695

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYS 310
            +    +   A  F+++G+    +V  + ++ ++  D  S  T  + +      +A ++S
Sbjct: 696 HLTGLDAPQ-AVVFAADGRTVA-AVGHNGSVRVW--DTGSGRTRTVRDGRSEGTTAVAFS 751

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD          +G  +L   +       R  +    +    V+SP G ++A     G  
Sbjct: 752 PDGRTYA-TVRADGSTRLR--EVITGTLLRTIRGGFENSRTVVFSPDGRILAVPDSGGTV 808

Query: 371 FAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                    G++   L        +      P GR+++     + D   +++ +  +   
Sbjct: 809 RRWDA--ATGTELSTLTTGHRGRGITHVALGPDGRTMV--TGNNLDPAVRVHDLPADRPR 864

Query: 428 ETLINTPA 435
            TL   P 
Sbjct: 865 TTLAGRPG 872



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 79/241 (32%), Gaps = 20/241 (8%)

Query: 202  NIRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            N           +  P    F+PN + V  A   +     +  + T   R  + +G+   
Sbjct: 919  NPARRGGDLPITVLRPAALGFAPN-KDVLVARVGENGKAEIRDVGTGRLRQSRAVGSLDK 977

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIV 317
                P FS +G+          A+ ++   L + A   L      ++    ++PDS  + 
Sbjct: 978  ----PVFSPDGRLLAFVGN-GGALRMW--HLSTGALRTLRTGGTQSVRTVLFAPDSRTLA 1030

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              +     +++ ++ +     +R  +    +     +SP G  +A     G    +    
Sbjct: 1031 VLTVEADGDRITLLDAATGRAQRTVEPSVRTSLSLAFSPDGRTLAAASSGGS---VKTWD 1087

Query: 378  KDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                  +     D  +++  +   GR+L         TG  L+ +    +   +   P  
Sbjct: 1088 ARTGGLQDSFRADGEVRSLAFGSDGRTLALGTT----TGVGLWDLTTAQKRAAVPTRPVA 1143

Query: 437  A 437
            A
Sbjct: 1144 A 1144



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 56/189 (29%), Gaps = 15/189 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F P  + +A AT D      + + D         +      ++   FS +G     +  
Sbjct: 626 AFGPGGRVLAVATGDT-----IGVWDATTGTRISTLPAADGAVIGMAFSPDGHTVAAAY- 679

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 +   D+ +         L    +  ++ D   +           + V  +    
Sbjct: 680 ---PSAVRVWDVATGRVRHHLTGLDAPQAVVFAADGRTVAAV---GHNGSVRVWDTGSGR 733

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPT 396
            + +   +        +SP G   A  +  G      V+   G+  R +     N +   
Sbjct: 734 TRTVRDGRSEGTTAVAFSPDGRTYATVRADGSTRLREVI--TGTLLRTIRGGFENSRTVV 791

Query: 397 WSPSGRSLI 405
           +SP GR L 
Sbjct: 792 FSPDGRILA 800



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 58/396 (14%), Positives = 98/396 (24%), Gaps = 104/396 (26%)

Query: 108  AQVLVTGRVIKEGKDRLRVEF----RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            A   V G         +   +    R+WDV   +                        + 
Sbjct: 659  ADGAVIGMAFSPDGHTVAAAYPSAVRVWDVATGR------------------------VR 694

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              +TG              +V +     S+ V D      R +   R +      FSP+ 
Sbjct: 695  HHLTGLDAPQAVVFAADGRTVAAVGHNGSVRVWDTGSGRTRTVRDGRSEGTTAVAFSPDG 754

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            +  A    D    LR  +  T +    + I           FS +G+   +    D    
Sbjct: 755  RTYATVRADGSTRLREVITGTLL----RTIRGGFENSRTVVFSPDGRILAV---PDSGGT 807

Query: 284  IYSVDLQSN-ATERLTN---TLFINISASYSPDSSQIV-------------FESDR---- 322
            +   D  +      LT       I    +  PD   +V               +DR    
Sbjct: 808  VRRWDAATGTELSTLTTGHRGRGI-THVALGPDGRTMVTGNNLDPAVRVHDLPADRPRTT 866

Query: 323  -EGKEQLYVMQSN-GSDQKRISQDKEASYFDPV--------------------------- 353
              G+    V     G D + +S   +                                  
Sbjct: 867  LAGRPGTSVTDLAFGPDARTVSTVGQGPPGRAAVQLWDARTGDRRATLPLDRNPARRGGD 926

Query: 354  ------------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                        ++P  D++        K  I        + R      +L  P +SP G
Sbjct: 927  LPITVLRPAALGFAPNKDVLVARVGENGKAEIR--DVGTGRLRQSRAVGSLDKPVFSPDG 984

Query: 402  RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            R L F          +++ +   G   TL      +
Sbjct: 985  RLLAFV---GNGGALRMWHLS-TGALRTLRTGGTQS 1016



 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 62/185 (33%), Gaps = 16/185 (8%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +R+      +++   S +G+    +  KD    I+ +  +       T      + A++
Sbjct: 571 RRRLVTGTEPVMSMALSPDGRTLA-THGKDGRTGIWDLP-EGRLRHSFTAHGSGGV-AAF 627

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P    +   +     + + V  +    +       + +     +SP G  +A    S  
Sbjct: 628 GPGGRVLAVAT----GDTIGVWDATTGTRISTLPAADGAVIGMAFSPDGHTVAAAYPS-- 681

Query: 370 KFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             A+ V      + R  L      QA  ++  GR++       G  GS       +GR  
Sbjct: 682 --AVRVWDVATGRVRHHLTGLDAPQAVVFAADGRTVAAV----GHNGSVRVWDTGSGRTR 735

Query: 429 TLINT 433
           T+ + 
Sbjct: 736 TVRDG 740


>gi|291571283|dbj|BAI93555.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 189

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 52/135 (38%), Gaps = 4/135 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDL---QSNATERLTNTLFINISASYSPDSSQIVFE 319
           P  S NG+  +    ++    ++  DL          L  +L +  S S S     IV+ 
Sbjct: 56  PALSGNGRFLVFVSNREGQNQLFLYDLRRRSYKTLVELRRSLTVMESPSLSYTGRYIVYS 115

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           ++  G+  +Y+        + +++        P  SP G  I+F      ++ I ++ + 
Sbjct: 116 ANDSGRADIYLYDRLTYRLEMLTRGYRGGVRHPHISPNGRYISFEGSRRGQWDIEIIDR- 174

Query: 380 GSQERLLVEDSNLQA 394
           G    L  E S  ++
Sbjct: 175 GPNIELDTETSLSES 189



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 52/126 (41%), Gaps = 4/126 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSP 356
           N++  +   + S +   +VF S+REG+ QL++        K + + + +      P  S 
Sbjct: 48  NSIATDEQPALSGNGRFLVFVSNREGQNQLFLYDLRRRSYKTLVELRRSLTVMESPSLSY 107

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  I ++     +  I +  +   +  +L       ++ P  SP+GR + F   + G  
Sbjct: 108 TGRYIVYSANDSGRADIYLYDRLTYRLEMLTRGYRGGVRHPHISPNGRYISFEGSRRGQW 167

Query: 415 GSKLYS 420
             ++  
Sbjct: 168 DIEIID 173



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 47/120 (39%), Gaps = 4/120 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRAL 273
           +P  S N + + + +  +    +++L D R       +   RS+ +  +P  S  G+  +
Sbjct: 55  QPALSGNGRFLVFVSNREGQN-QLFLYDLRRRSYKTLVELRRSLTVMESPSLSYTGRYIV 113

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            S       DIY  D  +   E LT            SP+   I FE  R G+  + ++ 
Sbjct: 114 YSANDSGRADIYLYDRLTYRLEMLTRGYRGGVRHPHISPNGRYISFEGSRRGQWDIEIID 173



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 14/116 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQ-------------ILFEPRFSPNQQKVAYATYD 232
           SG  +  + V +R+G N  +L   R +             ++  P  S   + + Y+  D
Sbjct: 59  SGNGRFLVFVSNREGQNQLFLYDLRRRSYKTLVELRRSLTVMESPSLSYTGRYIVYSAND 118

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                 +YL D    R       +R  +  P  S NG+       +    DI  +D
Sbjct: 119 SGRA-DIYLYDRLTYRLEMLTRGYRGGVRHPHISPNGRYISFEGSRRGQWDIEIID 173


>gi|325107609|ref|YP_004268677.1| hypothetical protein Plabr_1034 [Planctomyces brasiliensis DSM
           5305]
 gi|324967877|gb|ADY58655.1| protein of unknown function DUF1549 [Planctomyces brasiliensis DSM
           5305]
          Length = 1705

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 88/288 (30%), Gaps = 16/288 (5%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
                 A  I D  +  +        S       S+++    + + +   DG+ I     
Sbjct: 131 DDTPASAKAIYDADHPPVYHTAPSLTSLDYSPDGSLLAVAGHHEVLIHSADGSQIVRRLV 190

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                +   RFSPN  K+A        +  V + D         +      +    +S +
Sbjct: 191 GVSDRIESVRFSPNGTKLAVTGGAPARMGEVQVWDVSTGDLLLSVQVTYDTVYGASWSPD 250

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQ 327
           G +       +    +  ++  +        +     +  ++S D + +     R+   +
Sbjct: 251 GSKIAFGCADN---TLRVIEADTGKEVLFMGSHGDWVLDTTFSVDGTHLA-TVGRDQTAK 306

Query: 328 L--YVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD----G 380
           L  +  +    +   I+              P+ D I      G      + ++     G
Sbjct: 307 LTEFETERFVDNITSITPGALTGGLAAIARHPERDEILVGGADGTPRTYRMHRETKRVIG 366

Query: 381 SQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               L+ +       + +  + P G+ L  +   +G+    +YS D++
Sbjct: 367 DDANLVRQMPAIKGRIFSVAFRPDGKQLAAASSLNGEGFVGIYSYDVD 414



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 66/221 (29%), Gaps = 35/221 (15%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E ++WDV     ++  +                D +Y +     G   S+I F       
Sbjct: 220 EVQVWDVSTGDLLLSVQVT-------------YDTVYGASWSPDG---SKIAF------- 256

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G   N+L V++ D         S    + +  FS +   +A    D    L  +  +  +
Sbjct: 257 GCADNTLRVIEADTGKEVLFMGSHGDWVLDTTFSVDGTHLATVGRDQTAKLTEFETERFV 316

Query: 247 DRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--------TERL 297
           D       G     + A          L+    D     Y +  ++            ++
Sbjct: 317 DNITSITPGALTGGLAAIARHPERDEILVGG-ADGTPRTYRMHRETKRVIGDDANLVRQM 375

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGS 336
                   S ++ PD  Q+   S   G+    +Y    + +
Sbjct: 376 PAIKGRIFSVAFRPDGKQLAAASSLNGEGFVGIYSYDVDST 416


>gi|170103386|ref|XP_001882908.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642279|gb|EDR06536.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1477

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 47/274 (17%), Positives = 95/274 (34%), Gaps = 26/274 (9%)

Query: 149  ASWRKIAHTISDDIYQSITGEKGDF---NSRILFVSESV-----VSGIIKNSLCVMDRDG 200
              WR+  H I    ++  +         ++ IL V+ S      VSG   NS+ V D   
Sbjct: 829  QQWREKFHGIPSFTHRKASDVPLISIQTHTHILSVAFSTDGTCIVSGSRDNSVQVWDAST 888

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                 +       +    FS +  ++   + D      V + D       K +      +
Sbjct: 889  GAELKVLEGHMGSVLSIAFSTDGTRIVSGSDDK----SVRVWDVLTGAELKVLEGHMGSV 944

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFE 319
            L+  FS++G R + S   D+ + ++  D  +    + L   +    S ++S D + IV  
Sbjct: 945  LSVAFSTDGTRIV-SGSSDKCVRVW--DASTGAELKVLKGHMDCVRSVAFSTDGTHIVSG 1001

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            S     + + V  ++   + ++    E        S  G  IA +        +      
Sbjct: 1002 SQ---DKSVRVWDASTGAELKVL---EGHTHIAAISTYGTHIAVSGSEDNSVQVW--DAS 1053

Query: 380  GSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKD 411
               E  ++E      ++  +S  G  ++   + D
Sbjct: 1054 TGAELKVLEGHTFIVRSVAFSTDGTRIVSGSRDD 1087



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 82/249 (32%), Gaps = 36/249 (14%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             +VSG   +S+ V D        +       +    FS +  ++   + D      V + 
Sbjct: 1079 RIVSGSRDDSVRVWDTSTGAELKVLEGHTHSISSIAFSTDGTRIVSGSGDK----SVRVW 1134

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTL 301
            D       K +      + +  FS++G R + S   D    ++  D  +    + L   +
Sbjct: 1135 DVSTGAELKVLEGHTGSVWSVAFSTDGTRIV-SGSSDRFCWVW--DASTGAELKVLKGHM 1191

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQG 358
                S ++S D ++IV  S   G   + V  ++   + ++         +     +S  G
Sbjct: 1192 GAISSVAFSTDGTRIVSGS---GDTSVRVWDASTGAELKVLEGHTGHMGAISSIAFSTDG 1248

Query: 359  DLIAFTKFS--------------------GEKFAIGVMK-KDGSQERLL-VEDSNLQAPT 396
              I                           E +++ +     G++ ++L      + +  
Sbjct: 1249 TRIVSGSGDTSVRVWDASTGAELKVLEGHTEDYSVRLWDALTGAELKVLEGHTDYVWSVA 1308

Query: 397  WSPSGRSLI 405
            +S  G  ++
Sbjct: 1309 FSTDGTCIV 1317



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 92/294 (31%), Gaps = 44/294 (14%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            R++    D+     R+WDV    ++   +            H  S       T       
Sbjct: 913  RIVSGSDDK---SVRVWDVLTGAELKVLE-----------GHMGSVLSVAFSTD------ 952

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                     +VSG     + V D        +       +    FS +   +   + D  
Sbjct: 953  ------GTRIVSGSSDKCVRVWDASTGAELKVLKGHMDCVRSVAFSTDGTHIVSGSQDK- 1005

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-A 293
                V + D       K +            S+ G    +S  +D ++ ++  D  +   
Sbjct: 1006 ---SVRVWDASTGAELKVL---EGHTHIAAISTYGTHIAVSGSEDNSVQVW--DASTGAE 1057

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             + L    FI  S ++S D ++IV  S     + + V  ++   + ++ +    S     
Sbjct: 1058 LKVLEGHTFIVRSVAFSTDGTRIVSGSR---DDSVRVWDTSTGAELKVLEGHTHSISSIA 1114

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
            +S  G  I          ++ V       E  ++E    ++ +  +S  G  ++
Sbjct: 1115 FSTDGTRIV---SGSGDKSVRVWDVSTGAELKVLEGHTGSVWSVAFSTDGTRIV 1165



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 78/291 (26%), Gaps = 62/291 (21%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            R++    D+     R+WDV    ++   +            HT S       T       
Sbjct: 1121 RIVSGSGDK---SVRVWDVSTGAELKVLE-----------GHTGSVWSVAFSTD------ 1160

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                     +VSG       V D        +       +    FS +  ++   + D  
Sbjct: 1161 ------GTRIVSGSSDRFCWVWDASTGAELKVLKGHMGAISSVAFSTDGTRIVSGSGDT- 1213

Query: 235  DILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--- 288
                V + D       K +         I +  FS++G R + S   D ++ ++      
Sbjct: 1214 ---SVRVWDASTGAELKVLEGHTGHMGAISSIAFSTDGTRIV-SGSGDTSVRVWDASTGA 1269

Query: 289  -------------------LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
                               L     + L        S ++S D + IV  S       + 
Sbjct: 1270 ELKVLEGHTEDYSVRLWDALTGAELKVLEGHTDYVWSVAFSTDGTCIVSGS---ADYSVR 1326

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            V  ++   +  + +      +   +S  G  I           + V     
Sbjct: 1327 VWDASTGAELNVLKGHTHYVYSVAFSTDGTRIVSGSADNS---VRVWDAST 1374


>gi|315095055|gb|EFT67031.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL060PA1]
          Length = 1129

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 73  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLTTGDQRRLTWLGAARN 132

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G    R+ +       D   S  G + 
Sbjct: 133 LVVGWQDDEHVVFSSPHQTNDVGLTWLYTVSLDG----RVERLGYGPGMDLAVSSDGAVA 188

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +          L+ + N     ++ +GR        
Sbjct: 189 VVTPNSGDCSRWKRYRGGTAAQIWLQPAGAETFLRLLREGNDNHDGYAAAGRYSVGWIDG 248

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 249 RLIFSSDMSDDDCPQAQAQVWSVDGQGHDLRQHTHHGEAEGYVRDPR 295



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 65/168 (38%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 52  PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 107

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A      W    + + F+            +  +  DG
Sbjct: 108 RPEVFVIDLTTGDQRRLTWLGAARNLVVGWQDD-EHVVFSSPHQTNDVGLTWLYTVSLDG 166

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 167 RVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 213



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 91/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 66  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLTTGDQRR 123

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +  L   +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 124 LTWLGAARNLVVGW-QDDEHVVFSSPHQTNDVGLTWLYTVSLDGR-VERLGYGPGMDL-- 179

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 180 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLQPAGAETFLRLLREGNDNHDGYAAAG 239

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  +  +   G   R        +     P   G 
Sbjct: 240 RYSVGWIDGRLIFSSDMSDDDCPQAQAQVWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 299

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 300 TIVY------HTHGALWRMTGLDAEPERL 322



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNTL-FINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+        +  + +PD +++   S      ++
Sbjct: 394 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGRIGRVLHIAPAPDGTKVALISH---DGRI 450

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 451 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 510

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 511 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 569

Query: 442 WVGF 445
              F
Sbjct: 570 -SPF 572



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 414 GTGEIRRIAQG---RIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 463

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 464 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 523

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER--LTNTLFINISAS 308
            F+++GK   +   +  D   D  + DL    T+R  L        S  
Sbjct: 524 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEASPF 572


>gi|300864482|ref|ZP_07109348.1| putative WD-40 repeat protein [Oscillatoria sp. PCC 6506]
 gi|300337518|emb|CBN54496.1| putative WD-40 repeat protein [Oscillatoria sp. PCC 6506]
          Length = 1323

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 73/195 (37%), Gaps = 11/195 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S      + +  +DG N+++     +  ++  RFSP+ + +A A+ D    ++++  +  
Sbjct: 1106 SASSDKEIKLWSKDG-NLQHTLKGHNDSVYRVRFSPDGKTLASASAD--KTVKLWSKNGE 1162

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +      +   ++ +    FS +GK    S   D+ + ++  + +    + L        
Sbjct: 1163 LLNTLDGLEGHKNSVTDVNFSLDGKIIA-SASADQTIKLW--NKKGKLLKNLYGHSGEVQ 1219

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S S+S D   I   S       + +   +G     I   +    +   +SP    +A   
Sbjct: 1220 SISFSRDGQMIASGSK---DHTIKIWNRDGILLNTI-NVEVGPIYSVSFSPDQKYLAAGS 1275

Query: 366  FSGEKFAIGVMKKDG 380
                +  +  M  +G
Sbjct: 1276 -DDGRLRLWKMDLEG 1289



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 51/265 (19%), Positives = 92/265 (34%), Gaps = 50/265 (18%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTP--------------SRDQILFEPRFSPNQQKVAYATY 231
            S     ++ +   DG  I+ LT               S  + +    FSP+ Q +A A+ 
Sbjct: 1050 SASWDCTVKLWHSDGRLIKTLTDHSIQSKEKNCSNQSSHSKYVQGVAFSPDGQMIASASS 1109

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--- 288
            D E    + L     +      G+  S +   RFS +GK    S   D+ + ++S +   
Sbjct: 1110 DKE----IKLWSKDGNLQHTLKGHNDS-VYRVRFSPDGKTLA-SASADKTVKLWSKNGEL 1163

Query: 289  ---LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
               L       L          ++S D   I   S     + + +    G   K +    
Sbjct: 1164 LNTLDG-----LEGHKNSVTDVNFSLDGKIIASAS---ADQTIKLWNKKGKLLKNL-YGH 1214

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-----APTWSPS 400
                    +S  G +IA      +   I +  +DG    +L+   N++     + ++SP 
Sbjct: 1215 SGEVQSISFSRDGQMIA---SGSKDHTIKIWNRDG----ILLNTINVEVGPIYSVSFSPD 1267

Query: 401  GRSLIFSRKKDGDTGSKLYSIDLNG 425
             + L        D   +L+ +DL G
Sbjct: 1268 QKYLAAGSD---DGRLRLWKMDLEG 1289



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 78/218 (35%), Gaps = 25/218 (11%)

Query: 218  RFSPNQQKVAYATYD-------DEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSS 267
             FSP+ + +A A++D        +  L   L D  I    K   N  S    +    FS 
Sbjct: 1040 AFSPDGKIIASASWDCTVKLWHSDGRLIKTLTDHSIQSKEKNCSNQSSHSKYVQGVAFSP 1099

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            +G+    S   D+ + ++S D   N    L           +SPD   +   S     + 
Sbjct: 1100 DGQMIA-SASSDKEIKLWSKD--GNLQHTLKGHNDSVYRVRFSPDGKTLASAS---ADKT 1153

Query: 328  LYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            + +   NG     +   +  + S  D  +S  G +IA          I +  K G   + 
Sbjct: 1154 VKLWSKNGELLNTLDGLEGHKNSVTDVNFSLDGKIIASASADQT---IKLWNKKGKLLKN 1210

Query: 386  LV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            L      +Q+ ++S  G+ +        D   K+++ D
Sbjct: 1211 LYGHSGEVQSISFSRDGQMIA---SGSKDHTIKIWNRD 1245



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 94/292 (32%), Gaps = 52/292 (17%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             EKG +        + + S    N++ + ++            +Q +++  F+P+ Q +A
Sbjct: 933  HEKGLWGVSFSPDGKIIASASKDNTVKLWNK--QEASQAFGGGEQSIWDISFNPDSQIIA 990

Query: 228  YATYDD-------------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             A+                +D++   L      +      +    +    FS +GK    
Sbjct: 991  SASESKVVKQRAINGNSLCKDLVDPNLNKALDSKCESPKFSHNEKVKGVAFSPDGKIIA- 1049

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNTL--------FINISAS-------YSPDSSQIVFE 319
            S   D  + ++  D      + LT+              S S       +SPD   I   
Sbjct: 1050 SASWDCTVKLWHSD--GRLIKTLTDHSIQSKEKNCSNQSSHSKYVQGVAFSPDGQMIASA 1107

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            S     +++ +   +G + +   +    S +   +SP G  +A          + +  K+
Sbjct: 1108 SS---DKEIKLWSKDG-NLQHTLKGHNDSVYRVRFSPDGKTLASASADKT---VKLWSKN 1160

Query: 380  GSQERLL----VEDSNLQAPTWSPSGRSLIFSR--------KKDGDTGSKLY 419
            G     L       +++    +S  G+ +  +          K G     LY
Sbjct: 1161 GELLNTLDGLEGHKNSVTDVNFSLDGKIIASASADQTIKLWNKKGKLLKNLY 1212



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 56/378 (14%), Positives = 120/378 (31%), Gaps = 95/378 (25%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ-----SITGEKGDFNSRILFVSESV 184
           L +     + + + FF +  S  ++  T+   +Y       +   + D  S        +
Sbjct: 591 LIESLRATKKLKQAFFPASDSQMRVVTTLRQAVYDVREFNRLEKHQDDVRSVSFSPDGQI 650

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           ++     ++ +  ++G  ++         +    FSPN + +A  +     I++++  D 
Sbjct: 651 LTSSRDKTIKLWTKEGYLLKEFKKEHSDTILSASFSPNGKIIA--SGSANGIIKLWQKDG 708

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD---LQSNATER----- 296
               + K I    + I A +F+ NG+    S  +DE +  +S+D   L++   ++     
Sbjct: 709 VNLSSLKTIKGHSAPIRALKFTPNGQIIA-SSSEDETIRFWSLDGKLLKTIPAKQVNQGW 767

Query: 297 -----------LTNTLFINI-----------------------------------SASYS 310
                      L      N                                    S  +S
Sbjct: 768 VLSMSFKDNKTLATGGGNNTVKFWRSNDGKFKNVELLGTLKEYDRKPTGDGRAVWSIDFS 827

Query: 311 PDSSQIVFESDREGKEQLYV-------------MQSNGSDQKRISQDK------------ 345
            D + +     R+G  +L+               +    + KRI ++             
Sbjct: 828 HDGTMLA-TGGRDGTIKLWRKESKSIDWIKDLNFKLEEKEVKRICENGVKEKRNGVAISC 886

Query: 346 ----EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
               E       +SP   +IA   +  +       K   + E L   +  L   ++SP G
Sbjct: 887 LKKSEDFVRGVSFSPDNQVIAAATWDKKIILWYWNKPVTTPETLNGHEKGLWGVSFSPDG 946

Query: 402 RSLIFSRKKDGDTGSKLY 419
           + +  + K   D   KL+
Sbjct: 947 KIIASASK---DNTVKLW 961


>gi|298245754|ref|ZP_06969560.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297553235|gb|EFH87100.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 681

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 88/236 (37%), Gaps = 17/236 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ V +              + +    +SP+++ +A A+ D      V++ +  
Sbjct: 415 SGCANGTVNVWETQTGKRITSYRQHTRRVNAVAWSPDERFLASASDDS----TVHVWNPL 470

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  ++       + A  +S +G+    S  KD  + ++   +  N  ER         
Sbjct: 471 SGKLTQKYTGHSEAVSALSWSPDGQTLA-SGSKDTTIQLWE-PISGNLLERYEGHAHGIS 528

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + ++SP  +QI   +  E    ++ +    S Q  I+     S     WSP G+ +A   
Sbjct: 529 ALAWSPQGAQIASSALNENSVVIWEVA---SKQAVINHQHSDSVLALSWSPHGNYLA--- 582

Query: 366 FSGEKFAIGVMK-KDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             G+   + V     G + R+      N+ A  WS +  ++        D   +++
Sbjct: 583 SGGKDSQVHVWSIVSGEKARVYTGHRGNVNAIAWSSTETAIA---SGGDDRTIQIW 635



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 65/209 (31%), Gaps = 18/209 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F  +   + + ++            T       R     +  LA  +S  G     S  
Sbjct: 359 AFVASAGSIFFFSHQTTPPPAQSKTPTNTPGYVLRTFALDATALALSWSPKGTYLA-SGC 417

Query: 278 KDEAMDIYSVDLQSNATERLTNTL--FINISA-SYSPDSSQIVFESDREGKEQLYVMQSN 334
            +  ++++    ++   +R+T+       ++A ++SPD   +   SD      ++V    
Sbjct: 418 ANGTVNVW----ETQTGKRITSYRQHTRRVNAVAWSPDERFLASASD---DSTVHVWNPL 470

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNL 392
                +       +     WSP G  +A          I + +       ER       +
Sbjct: 471 SGKLTQKYTGHSEAVSALSWSPDGQTLASGSKDTT---IQLWEPISGNLLERYEGHAHGI 527

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            A  WSP G  +        +    ++ +
Sbjct: 528 SALAWSPQGAQIA--SSALNENSVVIWEV 554



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/315 (13%), Positives = 101/315 (32%), Gaps = 40/315 (12%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI 139
              +   +  +    D+      W+  G   L +G         + V    W+ +  K+I
Sbjct: 383 TPTNTPGYVLRTFALDATALALSWSPKGT-YLASG----CANGTVNV----WETQTGKRI 433

Query: 140 IGKKFFSSPASW-------RKIAHTISDDIYQSITGEKGDFNSRILFVSESVV------- 185
              +  +   +        R +A    D          G    +    SE+V        
Sbjct: 434 TSYRQHTRRVNAVAWSPDERFLASASDDSTVHVWNPLSGKLTQKYTGHSEAVSALSWSPD 493

Query: 186 -----SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                SG    ++ + +    N+          +    +SP   ++A ++  +E+ + ++
Sbjct: 494 GQTLASGSKDTTIQLWEPISGNLLERYEGHAHGISALAWSPQGAQIA-SSALNENSVVIW 552

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + ++      +       +LA  +S +G     S  KD  + ++S+ +        T  
Sbjct: 553 EVASKQAVINHQ---HSDSVLALSWSPHGNYLA-SGGKDSQVHVWSI-VSGEKARVYTGH 607

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGD 359
                + ++S   + I       G ++   +       +  +   + + +   WSP  G 
Sbjct: 608 RGNVNAIAWSSTETAIA----SGGDDRTIQIWPPFEGDRLYTNILQTTTYGLAWSPTSGT 663

Query: 360 LIAFTKFSGEKFAIG 374
            IA +    ++  I 
Sbjct: 664 TIA-SGGDDKQVKIW 677


>gi|86739440|ref|YP_479840.1| WD-40 repeat-containing serine/threonin protein kinase [Frankia sp.
           CcI3]
 gi|86566302|gb|ABD10111.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           CcI3]
          Length = 833

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 74/249 (29%), Gaps = 18/249 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG---NFRSMILA 262
                     +  FSP+ + +A  +YD      V L D    R P  +         +L 
Sbjct: 539 TLARHTSWTLDAAFSPDGRLLATVSYDR----SVILWDLGDPRHPVELSVILGHNGWVLD 594

Query: 263 PRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES- 320
             FS +GK    S       +   +   + +    L          ++SP+   +   S 
Sbjct: 595 AAFSPDGKVLATSGYDNTARLWDVTDPRRPSQLSVLDRHTSWVNEVAFSPNGHLLATASA 654

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           DR  +               I+   +  +    +SP G  +A   + G      +     
Sbjct: 655 DRTARLWDVTDPRRPRPLAAITAHTDYVW-AVAFSPDGRRLATGAYDGTARIWDITNPSR 713

Query: 381 SQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPA 435
                    ++  +    +SP GR+L        DT   L+ +   GR     T+     
Sbjct: 714 PAATASFPADEKWVFDVAFSPDGRTLA---TAGWDTTVHLWDVTEPGRPPAIGTITGHGD 770

Query: 436 YASDPQWVG 444
           +     W  
Sbjct: 771 WVQALAWTP 779



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 89/261 (34%), Gaps = 13/261 (4%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-----SRDQILFEPRFSPNQQKVA 227
           +     F  +  +   +     V+  D  + R+          +  + +  FSP+ + +A
Sbjct: 546 WTLDAAFSPDGRLLATVSYDRSVILWDLGDPRHPVELSVILGHNGWVLDAAFSPDGKVLA 605

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            + YD+   L   + D R       +    S +    FS NG     +   D    ++ V
Sbjct: 606 TSGYDNTARLW-DVTDPRRPSQLSVLDRHTSWVNEVAFSPNGHLLA-TASADRTARLWDV 663

Query: 288 --DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
               +      +T       + ++SPD  ++      +G  +++ + +        S   
Sbjct: 664 TDPRRPRPLAAITAHTDYVWAVAFSPDGRRLA-TGAYDGTARIWDITNPSRPAATASFPA 722

Query: 346 EASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSPSGR 402
           +  + FD  +SP G  +A   +        V +     +   +      +QA  W+P   
Sbjct: 723 DEKWVFDVAFSPDGRTLATAGWDTTVHLWDVTEPGRPPAIGTITGHGDWVQALAWTPDSH 782

Query: 403 SLIFSRKKDGDTGSKLYSIDL 423
           S+  +        S++   DL
Sbjct: 783 SIATASDDYTVRISRIGDADL 803


>gi|83816150|ref|YP_446123.1| hypothetical protein SRU_2015 [Salinibacter ruber DSM 13855]
 gi|83757544|gb|ABC45657.1| hypothetical protein SRU_2015 [Salinibacter ruber DSM 13855]
          Length = 1006

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 79/229 (34%), Gaps = 12/229 (5%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            F P  +P      +A   D     +  +              R   + P  S +G    
Sbjct: 429 AFTPARAPGG--PVWAARRDGSFSELVTLGEERATLRAHRPGLRYKQVVP--SPSGDTIA 484

Query: 274 ISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +         +Y  D  ++  E  L          ++ P+   ++F +D  G   +Y + 
Sbjct: 485 VLANAGGTQGLYRFDPSTSTLEPWLRFEGGSIYDVTWGPEGRYVLFAADPSGIANVYALD 544

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
               D +R++  +  +  +P  SP  + +AF ++  E+F +  +       R + +    
Sbjct: 545 RRDGDVRRLTTVRYGAL-EPTLSPGRERVAFARYRHERFELATVPFRPDSPRPVADTERD 603

Query: 393 QAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNETLINTPAYASD 439
               W+P G  L  S      G  G++      +G ++  + +   A+ 
Sbjct: 604 ----WAPRGGVLTASADSAAGGRAGAERRVSGTDGASQNGLPSGRDAAS 648



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 83/277 (29%), Gaps = 15/277 (5%)

Query: 149 ASWRKIA-HTISDDIY----QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
            S R+ A   I+D       + +   +  + S    V+ +           +    G   
Sbjct: 310 DSLRQAAEQGITDPTVVAGTEGLHVRRPYWLSDSTLVAYASGYATRPGFYRIDVHTGERE 369

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSM 259
             ++             P+   + +A         D   +      +     R+ +  S 
Sbjct: 370 -VISHQATTQGRTYALGPDTTALYFARQHPDLLVPDATTLKTHRLNLRTGETRLVSETSG 428

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVF 318
              P  +  G   + + ++D +     V L         +   +       SP    I  
Sbjct: 429 AFTPARAPGGP--VWAARRDGSFSE-LVTLGEERATLRAHRPGLRYKQVVPSPSGDTIAV 485

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK- 377
            ++  G + LY    + S  +   + +  S +D  W P+G  + F         +  +  
Sbjct: 486 LANAGGTQGLYRFDPSTSTLEPWLRFEGGSIYDVTWGPEGRYVLFAADPSGIANVYALDR 545

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           +DG   RL         PT SP    + F+R +    
Sbjct: 546 RDGDVRRLTTVRYGALEPTLSPGRERVAFARYRHERF 582


>gi|325917068|ref|ZP_08179304.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325536732|gb|EGD08492.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 711

 Score = 74.3 bits (181), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 82/274 (29%), Gaps = 51/274 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   V +A    +         L V  + TR    PKR+      + +P  S
Sbjct: 36  VSSPTLSPDGSVVLFAKRQAKTANGKPATSLWVRNLRTRDLSPPKRLTPEGWNVNSPALS 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y+  L     ++LT       S   SPD  +I F +   G  
Sbjct: 96  PDGKTVYFLSSKSGSQQLYAQALAGGTPQQLTAFAVDVDSYKLSPDGKRIAFSA---GVF 152

Query: 327 QLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           Q      +           +    +  ++        W+       F        A  V+
Sbjct: 153 QDCGSDLDCTKKKLASVKNAKASGVVYNQLFVRHWDTWNDGRRNTLFVSELPASGAKPVV 212

Query: 377 KKDGSQERLLVED-----SNLQAPTWSPSGRSLIFS-----------------------R 408
                   L  +            TWSP G S++ S                        
Sbjct: 213 GASAISATLAGDAPSKPFGGNDDYTWSPDGASVVASVRIPQPHGPEAGKAAKSAAKPTGN 272

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +   T   LY +D  G +  +  T   A++P W
Sbjct: 273 DEPWQTNFDLYRLDAAGESAPVNLT---AANPAW 303



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 84/291 (28%), Gaps = 64/291 (21%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R      S  ++Q    +      ++  V  +  SG++ N L V   D  N
Sbjct: 135 SYKLSPDGKRIA---FSAGVFQDCGSDLDCTKKKLASVKNAKASGVVYNQLFVRHWDTWN 191

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVA-YATYDDEDILRVYLMDTRIDRA--PKRIGNFRSM 259
                              + ++   + +       +  +  + I               
Sbjct: 192 -------------------DGRRNTLFVSELPASGAKPVVGASAISATLAGDAPSKPFGG 232

Query: 260 ILAPRFSSNGKRALISVQKDE-------------------------AMDIYSVDLQS-NA 293
                +S +G   + SV+  +                           D+Y +D    +A
Sbjct: 233 NDDYTWSPDGASVVASVRIPQPHGPEAGKAAKSAAKPTGNDEPWQTNFDLYRLDAAGESA 292

Query: 294 TERLTN-TLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQD 344
              LT      +    +S D   +         FE+DR G   +  M       + I+  
Sbjct: 293 PVNLTAANPAWDAGPVFSADGRTLYYRAMKRPGFEADRFG---VMAMDVASGKTREIAPK 349

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQA 394
            + S      S  GD +        +  +  +K  DGS  +++  +S  + 
Sbjct: 350 WDRSADSIQVSANGDSLYVPAQEMGQHPLFEIKIADGSVSQIVGGNSVAEF 400


>gi|282854721|ref|ZP_06264056.1| WD40-like protein [Propionibacterium acnes J139]
 gi|282582303|gb|EFB87685.1| WD40-like protein [Propionibacterium acnes J139]
          Length = 1120

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 64  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLTTGDQRRLTWLGAARN 123

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G    R+ +       D   S  G + 
Sbjct: 124 LVVGWQDDEHVVFSSPHQTNDVGLTWLYTVSLDG----RVERLGYGPGMDLAVSSDGAVA 179

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +          L+ + N     ++ +GR        
Sbjct: 180 VVTPNSGDCSRWKRYRGGTAAQIWLQPAGAETFLRLLREGNDNHDGYAAAGRYSVGWIDG 239

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 240 RLIFSSDMSDDDCPQAQAQVWSVDGQGHDLRQHTHHGEAEGYVRDPR 286



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 65/168 (38%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 43  PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 98

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A      W    + + F+            +  +  DG
Sbjct: 99  RPEVFVIDLTTGDQRRLTWLGAARNLVVGWQDD-EHVVFSSPHQTNDVGLTWLYTVSLDG 157

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 158 RVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 204



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 91/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 57  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLTTGDQRR 114

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +  L   +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 115 LTWLGAARNLVVGW-QDDEHVVFSSPHQTNDVGLTWLYTVSLDGR-VERLGYGPGMDL-- 170

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 171 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLQPAGAETFLRLLREGNDNHDGYAAAG 230

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  +  +   G   R        +     P   G 
Sbjct: 231 RYSVGWIDGRLIFSSDMSDDDCPQAQAQVWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 290

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 291 TIVY------HTHGALWRMTGLDAEPERL 313



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNTL-FINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+        +  + +PD +++   S      ++
Sbjct: 385 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGRIGRVLHIAPAPDGTKVALISH---DGRI 441

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 442 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 501

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 502 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 560

Query: 442 WVGF 445
              F
Sbjct: 561 -SPF 563



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 405 GTGEIRRIAQG---RIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 454

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 455 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 514

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER--LTNTLFINISAS 308
            F+++GK   +   +  D   D  + DL    T+R  L        S  
Sbjct: 515 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEASPF 563


>gi|282878955|ref|ZP_06287719.1| dipeptidyl peptidase IV domain protein [Prevotella buccalis ATCC
           35310]
 gi|281298954|gb|EFA91359.1| dipeptidyl peptidase IV domain protein [Prevotella buccalis ATCC
           35310]
          Length = 720

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 97/272 (35%), Gaps = 55/272 (20%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDE- 234
               L +   DG + +  T    +I++                ++PN QK+A+   D   
Sbjct: 157 KSQQLHIRTADGNDTQLTTDGSREIVYGQSVHRDEFGIHKGMFWAPNGQKLAFYRMDQSM 216

Query: 235 --DILRVYLMDTRIDRAPKR-----------------IGNFRSMILAP-----------R 264
             D  +V + D      P +                 +   +++ L              
Sbjct: 217 VADYPQVNIFDRIAKCEPDKYPMAGETSHKVTVLVYDLTTKKTVTLQAGDPTDRYFTNIS 276

Query: 265 FSSNGKRAL-ISVQKDEAM-DIYSVDLQSNA----TERLTNTLFINISA--SYSP-DSSQ 315
           +S + K      + +D+    + S D Q+        R T+  ++      ++ P D++ 
Sbjct: 277 WSPDSKIIYMFELNRDQNDCRLVSYDAQTGKKIAELYRETHDKYVEPQHPITFLPWDNNL 336

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAI 373
            + +S R+G   LY+ Q+NG   K++++ K        ++ +   I +T       +   
Sbjct: 337 FIMQSQRDGYNHLYLYQTNGKLVKQLTKGKWVVLDVIGFNTKDKSIVYTSTEKHALQTNT 396

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +     + RLL       +P+ SPSG  ++
Sbjct: 397 YTINVKTGKRRLLDNGRGYHSPSLSPSGTFIV 428



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/120 (14%), Positives = 45/120 (37%), Gaps = 4/120 (3%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           LF+ +S   G     L +   +G  ++ LT  +  +L    F+   + + Y +  ++  L
Sbjct: 336 LFIMQSQRDGYNH--LYLYQTNGKLVKQLTKGKWVVLDVIGFNTKDKSIVYTS-TEKHAL 392

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATER 296
           +       +    +R+ +      +P  S +G   +    +     +I  ++  +    +
Sbjct: 393 QTNTYTINVKTGKRRLLDNGRGYHSPSLSPSGTFIVDKYSEPTVPRNIEIINTANGKRTQ 452


>gi|153871381|ref|ZP_02000566.1| WD-40 repeat protein [Beggiatoa sp. PS]
 gi|152072155|gb|EDN69436.1| WD-40 repeat protein [Beggiatoa sp. PS]
          Length = 296

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 94/248 (37%), Gaps = 26/248 (10%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+     +  + + D     +     +  +    FSP+ +++  A+ +        L DT
Sbjct: 11  VTASNDGTARIWELDSPEEIFPLREHEGPVEAASFSPDGKQLITASAEG----TARLWDT 66

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                   +   +  +    F+ +GK+ +++  +D    ++    ++     +     + 
Sbjct: 67  ETGELLLILEGHKQGVPYATFNHDGKQ-VVTASQDNTARLW--HAETGEELAILKHEHVV 123

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             A++SPD   +V  +  +G  +++  + +G +   +      SY    +SP G LI  T
Sbjct: 124 EHAAFSPDGKLVV-TASWDGTARVWNAE-SGEEISELKHHNGVSYA--TFSPDGSLIVTT 179

Query: 365 KFSGEKFAIG-----------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            +      I             +    ++  L+     +   T+SP G+ L+ +     D
Sbjct: 180 SWDKTA-RIWETPLKRKNATNAINALNAKRVLIGHQGVVNHATFSPDGQRLVTASS---D 235

Query: 414 TGSKLYSI 421
             ++++++
Sbjct: 236 NTARVWAV 243



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 63/190 (33%), Gaps = 22/190 (11%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            + ++    FSP+ + V  A++D        + +         + +   +  A  FS +G
Sbjct: 119 HEHVVEHAAFSPDGKLVVTASWDG----TARVWNAESGEEISELKHHNGVSYA-TFSPDG 173

Query: 270 KRALISVQKDEAMDIYSVDLQSNATER----------LTNTLFINISASYSPDSSQIVFE 319
              +++   D+   I+   L+                L     +   A++SPD  ++V  
Sbjct: 174 -SLIVTTSWDKTARIWETPLKRKNATNAINALNAKRVLIGHQGVVNHATFSPDGQRLVTA 232

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S         V          I +    +     +SP G+ +    +        V + +
Sbjct: 233 SS---DNTARVWAVETGQPLAILKGHTNNVGYAAFSPDGEKVVTASWDNTA---RVWEAN 286

Query: 380 GSQERLLVED 389
             +  LL+ D
Sbjct: 287 TGELLLLLRD 296



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 89/237 (37%), Gaps = 23/237 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   + +  + D +   +  +     Q +    F+ + ++V  A+ D  +  R++  +T 
Sbjct: 54  TASAEGTARLWDTETGELLLILEGHKQGVPYATFNHDGKQVVTASQD--NTARLWHAETG 111

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFIN 304
            + A   I     ++    FS +GK  +++   D    ++  + +S      L +   ++
Sbjct: 112 EELA---ILKHEHVVEHAAFSPDGK-LVVTASWDGTARVW--NAESGEEISELKHHNGVS 165

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQS---------NGSDQKRISQDKEASYFDPVWS 355
             A++SPD S IV  S  +   +++             N  + KR+    +       +S
Sbjct: 166 Y-ATFSPDGSLIVTTS-WDKTARIWETPLKRKNATNAINALNAKRVLIGHQGVVNHATFS 223

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P G  +             V  + G    +L    +N+    +SP G  ++ +   +
Sbjct: 224 PDGQRLVTASSDNTARVWAV--ETGQPLAILKGHTNNVGYAAFSPDGEKVVTASWDN 278



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 83/214 (38%), Gaps = 19/214 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+ +  ++  A+ D     R++ +D+  +  P R       + A  FS +GK+  I+  
Sbjct: 2   AFNSSGTQLVTASND--GTARIWELDSPEEIFPLR--EHEGPVEAASFSPDGKQL-ITAS 56

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +    ++  D ++     +       +  A+++ D  Q+V  S         +  +   
Sbjct: 57  AEGTARLW--DTETGELLLILEGHKQGVPYATFNHDGKQVVTASQ---DNTARLWHAETG 111

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAP 395
           ++  I +  E       +SP G L+    + G      V   +  +E   L   + +   
Sbjct: 112 EELAILK-HEHVVEHAAFSPDGKLVVTASWDGTA---RVWNAESGEEISELKHHNGVSYA 167

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           T+SP G  ++ +     D  ++++   L  +N T
Sbjct: 168 TFSPDGSLIVTTSW---DKTARIWETPLKRKNAT 198



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/176 (10%), Positives = 58/176 (32%), Gaps = 24/176 (13%)

Query: 119 EGKDRLRVEF------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
               +L V        R+W+ +  ++I   K  +  +             Y + + +   
Sbjct: 129 SPDGKLVVTASWDGTARVWNAESGEEISELKHHNGVS-------------YATFSPDGSL 175

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
             +     +  +    +K        +  N + +      ++    FSP+ Q++  A+ D
Sbjct: 176 IVTTSWDKTARIWETPLKRKNATNAINALNAKRVLIGHQGVVNHATFSPDGQRLVTASSD 235

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           +       +      +    +    + +    FS +G++ +++   D    ++  +
Sbjct: 236 N----TARVWAVETGQPLAILKGHTNNVGYAAFSPDGEK-VVTASWDNTARVWEAN 286


>gi|159896747|ref|YP_001542994.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Herpetosiphon aurantiacus ATCC 23779]
 gi|159889786|gb|ABX02866.1| Periplasmic component of the Tol biopolymer transport system-like
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 331

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 70/175 (40%), Gaps = 16/175 (9%)

Query: 264 RFS--SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           RFS   + +RA++S        ++    ++   + L   + I    ++SPD + I +   
Sbjct: 153 RFSLAPDMQRAMLSDGGYLQSRLFWWSAEAGH-QPLDAGVAICQYFAWSPDGTTIAYAGS 211

Query: 322 REG----------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEK 370
                        +  LY+M S+G +++ I  +   +     WSP G  +     F G  
Sbjct: 212 PHAADSMATLGGVRSTLYLMDSDGGNRREIGTNIR-NVSGLQWSPDGQWLVVLGYFDGFD 270

Query: 371 FAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             + ++    ++   L     N Q P WSP G+ +    +K  D G   Y + L+
Sbjct: 271 NQVWLVNPTKAEWHQLTTTVGNYQWPAWSPDGKQIAVIWRKPADLGPSDYVMTLD 325



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 47/142 (33%), Gaps = 11/142 (7%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDD--------EDILRVYLMDTRIDRAPKRIGN 255
                +   I     +SP+   +AYA              +     +        + IG 
Sbjct: 184 HQPLDAGVAICQYFAWSPDGTTIAYAGSPHAADSMATLGGVRSTLYLMDSDGGNRREIGT 243

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               +   ++S +G+  ++    D     ++ V+       +LT T+      ++SPD  
Sbjct: 244 NIRNVSGLQWSPDGQWLVVLGYFDGFDNQVWLVNPTKAEWHQLTTTVGNYQWPAWSPDGK 303

Query: 315 QIV--FESDREGKEQLYVMQSN 334
           QI   +    +     YVM  +
Sbjct: 304 QIAVIWRKPADLGPSDYVMTLD 325



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 50/149 (33%), Gaps = 15/149 (10%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--- 364
           S +PD  Q    SD  G  Q  +   +     +      A      WSP G  IA+    
Sbjct: 155 SLAPD-MQRAMLSD-GGYLQSRLFWWSAEAGHQPLDAGVAICQYFAWSPDGTTIAYAGSP 212

Query: 365 -------KFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
                     G +  + +M  DG   R +     N+    WSP G+ L+     DG   +
Sbjct: 213 HAADSMATLGGVRSTLYLMDSDGGNRREIGTNIRNVSGLQWSPDGQWLVVLGYFDG-FDN 271

Query: 417 KLYSIDLNG-RNETLINTPAYASDPQWVG 444
           +++ ++        L  T      P W  
Sbjct: 272 QVWLVNPTKAEWHQLTTTVGNYQWPAWSP 300



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 4/106 (3%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G ++++L +MD DG N R +  +   +    ++SP+ Q +    Y D    +V+L++   
Sbjct: 222 GGVRSTLYLMDSDGGNRREIGTNIRNVSGL-QWSPDGQWLVVLGYFDGFDNQVWLVNP-T 279

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQ 290
                ++         P +S +GK+  +  +K  D     Y + L 
Sbjct: 280 KAEWHQLTTTVGNYQWPAWSPDGKQIAVIWRKPADLGPSDYVMTLD 325


>gi|170115930|ref|XP_001889158.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635948|gb|EDR00249.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1514

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 55/314 (17%), Positives = 98/314 (31%), Gaps = 50/314 (15%)

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                    R+WD      ++G          R   H       + +T     F+    ++
Sbjct: 1129 SGSNDASLRIWDALTGLSVLG--------PLR--GH------VRHVTSV--AFSPDGRYI 1170

Query: 181  SESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            +    SG    ++ V D   G +        D+ +    FSP+ + +A  + D    +RV
Sbjct: 1171 A----SGSHDCTVRVWDALTGQSAMEPLKGHDKGVISVAFSPDGRYIASGSSDM--TVRV 1224

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERL 297
            +   T        IG+    + +  FS +GK   IS  +D  +  +  D  +       L
Sbjct: 1225 WNALTGQSVLDPFIGHTHC-VHSVSFSPDGKFI-ISGSEDTTIRAW--DALTGQSIMNPL 1280

Query: 298  TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSP 356
                    S ++SPD   IV  SD    + + V           S    + +     +S 
Sbjct: 1281 IGHWCSVQSVAFSPDGRYIVSGSD---DKTVRVWDFCTGQSVMDSLKGHSHWVHSVAFSS 1337

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-----APTWSPSGRSLIFSRKKD 411
             G  I           I +          L +          +  +SP GR +       
Sbjct: 1338 DGKYIVSGSHDKT---IRLWDAVTGHS--LGDPFKGHYAAVLSVVFSPDGRHIA-----S 1387

Query: 412  GDTGSKLYSIDLNG 425
            G +   +   D +G
Sbjct: 1388 GSSDKTIRLWDAHG 1401



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 74/226 (32%), Gaps = 9/226 (3%)

Query: 182  ESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            + +VSG    SL + D   G ++        + +    FSP+ + +A  ++D    +RV+
Sbjct: 1125 KQIVSGSNDASLRIWDALTGLSVLGPLRGHVRHVTSVAFSPDGRYIASGSHDC--TVRVW 1182

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
               T         G+ +  +++  FS +G+    S   D  + +++     +  +     
Sbjct: 1183 DALTGQSAMEPLKGHDKG-VISVAFSPDGRYIA-SGSSDMTVRVWNALTGQSVLDPFIGH 1240

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGD 359
                 S S+SPD     F         +    +  G            S     +SP G 
Sbjct: 1241 THCVHSVSFSPDGK---FIISGSEDTTIRAWDALTGQSIMNPLIGHWCSVQSVAFSPDGR 1297

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             I                     + L      + +  +S  G+ ++
Sbjct: 1298 YIVSGSDDKTVRVWDFCTGQSVMDSLKGHSHWVHSVAFSSDGKYIV 1343



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 99/305 (32%), Gaps = 66/305 (21%)

Query: 114  GRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
            G +      R  V         +WD      I+          ++  AH +S  +Y    
Sbjct: 834  GPLAYSPDGRHIVSGSHGGDIHVWDALTGHNIM---------DFKGHAHYVSSVVY---- 880

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKV 226
               G          + ++SG    ++ + D   G  +       D  +     SP+   +
Sbjct: 881  SPDG----------KHIISGSWDKTIKIWDALTGQCVMGPLEGHDDWISSVVCSPDSGHI 930

Query: 227  AYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
               + D      + + +T   ++  + +      + +  +S  G+   IS  +D  + I+
Sbjct: 931  VSGSRDM----TIRVWNTLTGQSVMEPLKGHSGSVTSVAYSPCGRHI-ISGSRDCTIRIW 985

Query: 286  SVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
              D  +     + LT      +  +YSPD   IV  S     + + V  +          
Sbjct: 986  --DAATGRCLMDPLTGHDETVLCVAYSPDGMNIVSGSF---DKTIRVWDA---------- 1030

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTWSPS 400
                      +SP G  I     +     I +     S      L  ++ ++ +  +SP+
Sbjct: 1031 -------LSAFSPDGKHIL---CATGNRIIRLWNALTSHCTSSPLEDDEGSVDSVVFSPN 1080

Query: 401  GRSLI 405
            G+ ++
Sbjct: 1081 GKHIL 1085



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 77/237 (32%), Gaps = 31/237 (13%)

Query: 185  VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VSG     + V D   G NI          +    +SP+ + +   ++D      + + D
Sbjct: 846  VSGSHGGDIHVWDALTGHNIMD-FKGHAHYVSSVVYSPDGKHIISGSWDK----TIKIWD 900

Query: 244  TRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                +     +      I +   S +    + S  +D  + +++     +  E L     
Sbjct: 901  ALTGQCVMGPLEGHDDWISSVVCSPDSGHIV-SGSRDMTIRVWNTLTGQSVMEPLKGHSG 959

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S +YSP    I+  S R+   +++   + G          + +     +SP G  I 
Sbjct: 960  SVTSVAYSPCGRHIISGS-RDCTIRIWDA-ATGRCLMDPLTGHDETVLCVAYSPDGMNIV 1017

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
               F      I V                     +SP G+ ++ +    G+   +L+
Sbjct: 1018 SGSFDKT---IRVWDALS---------------AFSPDGKHILCAT---GNRIIRLW 1053



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 78/233 (33%), Gaps = 39/233 (16%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQ 277
            F+P   K++   +    +  + + + ++ + P R +   +       +S +G+  + S  
Sbjct: 792  FAPQNSKIS-LHFMKYFVKTLTIENGQMKQWPDRCLLRLKGSNGPLAYSPDGRHIV-SGS 849

Query: 278  KDEAMDIY-------SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                + ++        +D +               S  YSPD   I+  S     + + +
Sbjct: 850  HGGDIHVWDALTGHNIMDFKG--------HAHYVSSVVYSPDGKHIISGS---WDKTIKI 898

Query: 331  MQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ---ERLL 386
              +          +  +      V SP    I           I V      Q   E L 
Sbjct: 899  WDALTGQCVMGPLEGHDDWISSVVCSPDSGHIVSGSRD---MTIRVWNTLTGQSVMEPLK 955

Query: 387  VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY-------SID-LNGRNETLI 431
                ++ +  +SP GR +I   +   D   +++        +D L G +ET++
Sbjct: 956  GHSGSVTSVAYSPCGRHIISGSR---DCTIRIWDAATGRCLMDPLTGHDETVL 1005


>gi|116626062|ref|YP_828218.1| WD-40 repeat-containing serine/threonin protein kinase [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116229224|gb|ABJ87933.1| serine/threonine protein kinase with WD40 repeats [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 937

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 53/247 (21%), Positives = 95/247 (38%), Gaps = 30/247 (12%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR- 264
           LT   D+ +     SP+  ++ YA +     LR      R+     RI +  + + A R 
Sbjct: 390 LTRLLDKNVTAAALSPDGTQLVYALFGGPLYLR------RMSDGGTRILHSPAGLRASRL 443

Query: 265 -FSSNGKRALISVQKDEA-MDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFE 319
            + ++GK+ LIS   D+  + ++ + L S   ER   L      + +   SPD S+I   
Sbjct: 444 AWFADGKQLLISGAGDDRKLALWVLPLDS--LERDAVLVPHQGRDAAP--SPDGSRIALC 499

Query: 320 SDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAF-----TKFSGEK--F 371
           S       + ++  +GS  + I S +  A++   VWSP    I++           K  F
Sbjct: 500 S--SDGSAIRIVDRDGSHPRVIRSAEPGANFHSLVWSPDSKRISYMILTQVARPPAKYSF 557

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL----IFSRKKDGDTGSKLYSIDLNGRN 427
               +  +       ++D  L + T  P GR +     +     G    ++ +    G  
Sbjct: 558 VFETVDAESGLLIARIDDLPLFSATALPDGRIIGLPWAYPATSHGGELIEIRTNPSTGAV 617

Query: 428 ETLINTP 434
                TP
Sbjct: 618 IGQSRTP 624



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 91/292 (31%), Gaps = 67/292 (22%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-----KRIG 254
           G +   +  S+D +      S N   +A  +    + + +Y  +      P     +R+ 
Sbjct: 619 GQSRTPMPYSKDGMFSSLTVSNNGGTMALIS--ASEFVNIYAAEFAAAPVPALSNVRRLT 676

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              +      ++ + K  L    ++   +++  +L S             +    +PD  
Sbjct: 677 FGLTQDYPQSWTPDSKAILFESNRNGRFELFRYELSSGRETMFYRGREDAVQPRVTPDGR 736

Query: 315 QIVFESDREGKE----QLYVMQSNGSDQ-------------------------------- 338
            I+F   R+G      QL  +  +GS Q                                
Sbjct: 737 WILF---RQGASRFAAQLMRLPVDGSAQAAPVPMAGETGAEQGCGAAPASRCVVRSVEAD 793

Query: 339 --------------KRISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAIGVMKKDGS- 381
                         + +++     Y    W  SP G +IA      +   I +   D   
Sbjct: 794 QFVVRELDPVQGKGRVLARTPYGPYLIFDWSLSPDGSVIASPNHDSQSALIRLTPLDARI 853

Query: 382 QER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            ER   L    NL + +WS  G+ L F     G  G  +YS DL G    L+
Sbjct: 854 DERFIKLEGFRNLSSVSWSADGKGL-FVTANAGSGGIMIYS-DLEGHASQLL 903



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 81/243 (33%), Gaps = 33/243 (13%)

Query: 203 IRYLTPSRDQILFEPR--------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +R ++    +IL  P         +  + +++  +   D+  L ++++          + 
Sbjct: 421 LRRMSDGGTRILHSPAGLRASRLAWFADGKQLLISGAGDDRKLALWVLPLDSLERDAVLV 480

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--FINISASYSPD 312
             +    AP  S +G R  +     +   I  VD   +    + +        S  +SPD
Sbjct: 481 PHQGRDAAP--SPDGSRIALCSS--DGSAIRIVDRDGSHPRVIRSAEPGANFHSLVWSPD 536

Query: 313 SSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI----AF 363
           S +I +      +    K        +      I++  +   F     P G +I    A+
Sbjct: 537 SKRISYMILTQVARPPAKYSFVFETVDAESGLLIARIDDLPLFSATALPDGRIIGLPWAY 596

Query: 364 --TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             T   GE   I      G+    ++  S    P +S  G   +FS     + G  +  I
Sbjct: 597 PATSHGGELIEIRTNPSTGA----VIGQSRTPMP-YSKDG---MFSSLTVSNNGGTMALI 648

Query: 422 DLN 424
             +
Sbjct: 649 SAS 651



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 72/229 (31%), Gaps = 17/229 (7%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  L   +            R+  + +PR +P+ + + +         ++  +     
Sbjct: 701 NGRFELFRYELSSGRETMFYRGREDAV-QPRVTPDGRWILFRQGASRFAAQLMRLPVDGS 759

Query: 248 RAPKRI------GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL---QSNATERLT 298
                +      G  +    AP       R ++   + +   +  +D    +     R  
Sbjct: 760 AQAAPVPMAGETGAEQGCGAAPA-----SRCVVRSVEADQFVVRELDPVQGKGRVLARTP 814

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQ 357
              ++    S SPD S I   +       + +   +    +R I  +   +     WS  
Sbjct: 815 YGPYLIFDWSLSPDGSVIASPNHDSQSALIRLTPLDARIDERFIKLEGFRNLSSVSWSAD 874

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           G  +  T  +G    +     +G   +LL E S +     SP G+ + +
Sbjct: 875 GKGLFVTANAGSGGIMIYSDLEGHASQLL-ESSKVTFVVPSPDGQRIAY 922



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 39/105 (37%), Gaps = 8/105 (7%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWS 398
           +++  + +      SP G  + +  F G    + + +      R+L   + L+A    W 
Sbjct: 390 LTRLLDKNVTAAALSPDGTQLVYALFGG---PLYLRRMSDGGTRILHSPAGLRASRLAWF 446

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNG--RNETLINTPAYASDPQ 441
             G+ L+       D    L+ + L+   R+  L+      + P 
Sbjct: 447 ADGKQLL-ISGAGDDRKLALWVLPLDSLERDAVLVPHQGRDAAPS 490


>gi|289669160|ref|ZP_06490235.1| putative dipeptidyl peptidase [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 711

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 82/274 (29%), Gaps = 51/274 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDE-------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   V +A    +         L V  + TR    PKR+      + +P  S
Sbjct: 36  VSSPTLSPDGSVVLFAKRQAKTANGKPASSLWVRNLRTRDLSPPKRLTPEGWNVNSPALS 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y+  +     ++LT       S   SPD  +I F +   G  
Sbjct: 96  PDGKTVYFLSSKTGSQQLYAQPMAGGTPQQLTAFAVDVDSYKLSPDGKRIAFSA---GVF 152

Query: 327 QLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           Q                       +  D+        W+       F        A  V+
Sbjct: 153 QDCGSDLGCTKKKLGELKNKKASGVVYDQLFVRHWDTWNDGRRNTLFVAELPAAGARAVV 212

Query: 377 KKDGSQERLLVED-----SNLQAPTWSPSGRSLIFS-----------------------R 408
                   L  +            TWSP G S++ S                        
Sbjct: 213 GASAISATLAGDAPSKPFGGNDDYTWSPDGASVVASVRIPQSHGPEAGKNAKTGAKPTGN 272

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +   T   LY +D +G++  +  T   A++P W
Sbjct: 273 DEPWQTNFDLYRLDASGKSAPVNLT---AANPAW 303



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 101/331 (30%), Gaps = 66/331 (19%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R      S  ++Q    + G    ++  +     SG++ + L V   D  N
Sbjct: 135 SYKLSPDGKRIA---FSAGVFQDCGSDLGCTKKKLGELKNKKASGVVYDQLFVRHWDTWN 191

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSM 259
                              + ++      +        ++         A          
Sbjct: 192 -------------------DGRRNTLFVAELPAAGARAVVGASAISATLAGDAPSKPFGG 232

Query: 260 ILAPRFSSNGKRALISVQKDE-------------------------AMDIYSVDLQSNA- 293
                +S +G   + SV+  +                           D+Y +D    + 
Sbjct: 233 NDDYTWSPDGASVVASVRIPQSHGPEAGKNAKTGAKPTGNDEPWQTNFDLYRLDASGKSA 292

Query: 294 TERLTN-TLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQD 344
              LT      +    +S D   +         FE+DR G   L  M       + I+  
Sbjct: 293 PVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFG---LMAMDVASGKTREIAPK 349

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S  + V S  G  +  +     +  +  +     +   LV + ++ APT +  G +L
Sbjct: 350 WDRSAGEIVLSDDGSSLYTSADDLGEHPLFKIDIASGEATKLVGEGSVHAPTLA--GNTL 407

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            F+R     +G +++  D  G++   I+  A
Sbjct: 408 AFTRS-SLKSGDQIFVSDTQGQSLRAISQSA 437



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/308 (14%), Positives = 94/308 (30%), Gaps = 61/308 (19%)

Query: 183 SVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +G   +SL V +   RD +  + LTP    +   P  SP+ + V + +       + 
Sbjct: 56  KTANGKPASSLWVRNLRTRDLSPPKRLTPEGWNVN-SPALSPDGKTVYFLSSKTGS--QQ 112

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATER- 296
                     P+++  F   + + + S +GKR   S  V +D   D+     +    +  
Sbjct: 113 LYAQPMAGGTPQQLTAFAVDVDSYKLSPDGKRIAFSAGVFQDCGSDLGCTKKKLGELKNK 172

Query: 297 -----LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----- 346
                + + LF+    +++      +F ++             G+     +   +     
Sbjct: 173 KASGVVYDQLFVRHWDTWNDGRRNTLFVAE---LPAAGARAVVGASAISATLAGDAPSKP 229

Query: 347 -ASYFDPVWSPQGDLIAFTKFSG-------------------------EKFAIGVMKKDG 380
                D  WSP G  +  +                               F +  +   G
Sbjct: 230 FGGNDDYTWSPDGASVVASVRIPQSHGPEAGKNAKTGAKPTGNDEPWQTNFDLYRLDASG 289

Query: 381 -SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTP 434
            S    L     +    P +S  G++L +   K     +    L ++D+       I   
Sbjct: 290 KSAPVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVASGKTREIA-- 347

Query: 435 AYASDPQW 442
                P+W
Sbjct: 348 -----PKW 350


>gi|186681982|ref|YP_001865178.1| protein kinase [Nostoc punctiforme PCC 73102]
 gi|186464434|gb|ACC80235.1| protein kinase [Nostoc punctiforme PCC 73102]
          Length = 678

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 75/231 (32%), Gaps = 14/231 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                +  +     SP+ + +A           + L +  I +    +  +   +     
Sbjct: 390 TLQGHENSVLSVAISPDGKTIA----SSGGDGIIKLWNLSIGKEISSLNAYSQQVNTVVI 445

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +GK  + S   D  + I+++         LT       + + S DS  +V  SD    
Sbjct: 446 SPDGKTLV-SASDDSTIKIWNL-ATGKQIRTLTGHSDSVRALAISADSETLVSGSD---D 500

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +      +Q R              SP   ++A   F  +   I  + K  S   L
Sbjct: 501 NTIKIWDLATGEQIRTLVGHTFWVRSVAISPDSVILASGSFD-KTIKIWNLTKGYSIRTL 559

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                 + A   SP G+ L  + +   D   KL+ + L G+    +   A 
Sbjct: 560 EGNYQTVTAVAISPDGKILASASR---DRTIKLWDL-LTGKEIRTLAGHAN 606



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/231 (17%), Positives = 81/231 (35%), Gaps = 27/231 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+ + +  A+ D      + + +    +  + +      + A   S++ +  + S   
Sbjct: 445 ISPDGKTLVSASDDS----TIKIWNLATGKQIRTLTGHSDSVRALAISADSETLV-SGSD 499

Query: 279 DEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D  + I+  DL +    R L    F   S + SPDS  +   S     + + +       
Sbjct: 500 DNTIKIW--DLATGEQIRTLVGHTFWVRSVAISPDSVILASGSF---DKTIKIWNLTKGY 554

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSN-LQAP 395
             R  +    +      SP G ++A          I +     G + R L   +N +   
Sbjct: 555 SIRTLEGNYQTVTAVAISPDGKILASASRDRT---IKLWDLLTGKEIRTLAGHANTVTTV 611

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLY-------SIDLNGRNETLINTPAYASD 439
            +S  G+ +    +   D   KL+        + L G   T+ +  A++ D
Sbjct: 612 AFSADGKIIASGSR---DRAIKLWNSATGEEILTLTGHTNTVTSV-AFSPD 658



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 86/245 (35%), Gaps = 21/245 (8%)

Query: 182 ESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +++VS    +++ + +   G  IR LT   D +      S + + +   + D+     + 
Sbjct: 450 KTLVSASDDSTIKIWNLATGKQIRTLTGHSDSVRAL-AISADSETLVSGSDDN----TIK 504

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D       + +      + +   S +    L S   D+ + I+++  +  +   L   
Sbjct: 505 IWDLATGEQIRTLVGHTFWVRSVAISPD-SVILASGSFDKTIKIWNL-TKGYSIRTLEGN 562

Query: 301 LFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                + + SPD   +   S DR     + +       + R       +     +S  G 
Sbjct: 563 YQTVTAVAISPDGKILASASRDRT----IKLWDLLTGKEIRTLAGHANTVTTVAFSADGK 618

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           +IA         AI +      +E   L    + + +  +SP  ++L+       D   K
Sbjct: 619 IIASGSRDR---AIKLWNSATGEEILTLTGHTNTVTSVAFSPDSKTLV---SGSEDNTIK 672

Query: 418 LYSID 422
           ++ + 
Sbjct: 673 IWRLS 677



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 50/235 (21%), Positives = 90/235 (38%), Gaps = 37/235 (15%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTI--------SD 160
            V+     +  V        ++W++   KQI  +       S R +A +         SD
Sbjct: 442 TVVISPDGKTLVSASDDSTIKIWNLATGKQI--RTLTGHSDSVRALAISADSETLVSGSD 499

Query: 161 D----IYQSITGEKG------DFNSRILFVSESVV---SGIIKNSLCVMDRD-GANIRYL 206
           D    I+   TGE+        F  R + +S   V   SG    ++ + +   G +IR L
Sbjct: 500 DNTIKIWDLATGEQIRTLVGHTFWVRSVAISPDSVILASGSFDKTIKIWNLTKGYSIRTL 559

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                Q +     SP+ + +A A+ D      + L D    +  + +    + +    FS
Sbjct: 560 -EGNYQTVTAVAISPDGKILASASRDR----TIKLWDLLTGKEIRTLAGHANTVTTVAFS 614

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           ++GK    S  +D A+ +++          LT       S ++SPDS  +V  S+
Sbjct: 615 ADGKIIA-SGSRDRAIKLWN-SATGEEILTLTGHTNTVTSVAFSPDSKTLVSGSE 667



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 9/97 (9%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPS 400
           Q  E S      SP G  IA    SG    I +      +E   L      +     SP 
Sbjct: 392 QGHENSVLSVAISPDGKTIA---SSGGDGIIKLWNLSIGKEISSLNAYSQQVNTVVISPD 448

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           G++L+ +     D+  K++++   G+    +   + +
Sbjct: 449 GKTLVSASD---DSTIKIWNL-ATGKQIRTLTGHSDS 481


>gi|313677243|ref|YP_004055239.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312943941|gb|ADR23131.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 771

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 85/259 (32%), Gaps = 41/259 (15%)

Query: 202 NIRYLTP--SRDQILFEPRFSPNQQKVAYATYDD--------EDILRVYLMDTRIDRAPK 251
           NI+ + P  + +   + P  S +Q  +A+ +           E++   Y          K
Sbjct: 160 NIQRMAPPINSEFTEYNPVVSADQSVMAFTSLRPNARTGRAAEEVYITYKSSGDWGEPSK 219

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-----NTLFINIS 306
                   +     S +G++ L+ +      +++ +        + +     N+  +  +
Sbjct: 220 IEIRTDENVGTAGISPDGQQMLVFIGSGNRGNLFMMKKDGKGWSQPSAIEGLNSRDLEST 279

Query: 307 ASYSPDSSQIVFESDRE---GKEQLYV----MQSNGSDQKRISQDKEASY--FDPVWSPQ 357
            S +PD  +I F S+R    G   ++V       N  + + +  +  + Y    P   P 
Sbjct: 280 GSITPDGKKIYFASNRPGGFGGMDIWVAEKLANGNWGNIENLGAEVNSKYDEDAPFIHPD 339

Query: 358 GDLIAFTKFSG---EKFAIGVMKKDGSQERLLVEDSNLQAP----------TWSPSGRSL 404
              + +T           I      G +        N+  P          T S  G   
Sbjct: 340 MKTLYYTSNGEKSMGGRDIFKTNVLGGK---WTTPENMGYPINTPLNDNYFTLSADGSKG 396

Query: 405 IFSRKKDGDTGSK-LYSID 422
            FS  ++G  G + +Y  D
Sbjct: 397 YFSSDREGGYGGQDIYIFD 415



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 64/215 (29%), Gaps = 25/215 (11%)

Query: 190 KNSLCVMDRDG--ANIRYLTPSRDQILFEPRFS--PNQQKVAYATYDDE-----DILRVY 240
           + +L +M +DG   +        +    E   S  P+ +K+ +A+         DI    
Sbjct: 249 RGNLFMMKKDGKGWSQPSAIEGLNSRDLESTGSITPDGKKIYFASNRPGGFGGMDIWVAE 308

Query: 241 LMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNAT 294
            +        + +G   N +    AP    + K    +   +      DI+  ++     
Sbjct: 309 KLANGNWGNIENLGAEVNSKYDEDAPFIHPDMKTLYYTSNGEKSMGGRDIFKTNVLGGKW 368

Query: 295 E------RLTNTLFINISASYSPDSSQIVFESDRE---GKEQLYVMQSNGSDQK-RISQD 344
                     NT   +   + S D S+  F SDRE   G + +Y+           ++  
Sbjct: 369 TTPENMGYPINTPLNDNYFTLSADGSKGYFSSDREGGYGGQDIYIFDMPEKYANIPLTML 428

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           K          P    I             V   D
Sbjct: 429 KGKITAGEDEQPVPTKIKLVDNENNTKVDYVYDPD 463


>gi|242210909|ref|XP_002471295.1| hypothetical WD-repeat protein [Postia placenta Mad-698-R]
 gi|220729579|gb|EED83450.1| hypothetical WD-repeat protein [Postia placenta Mad-698-R]
          Length = 342

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 90/242 (37%), Gaps = 21/242 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG +  ++ + D +    + L  + + ++    FSP+  ++A  + D        + D  
Sbjct: 112 SGSVDFTVRIWDVERGEQQSLCKAHNALVMVVTFSPDGTQLASGSAD----CDTRVWDAE 167

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFIN 304
                  +   + ++ + +F+ +G+R   +   D    ++    +S     +        
Sbjct: 168 TGMEISVLKGHQGVVYSVQFAPDGRRLA-TASDDGTSVVW--HAKSGERLVIFREHSGPV 224

Query: 305 ISASYSPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            S ++S D  +++   SDR     + V  S  ++        E      V+S  G+ +A 
Sbjct: 225 WSTAFSSDGKRLLSVASDRT----VKVCDSYSTEAILAIDGAEGMVNAAVFSDDGEFVA- 279

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSI 421
                E  ++ V      +   ++E          +SP  R L  +     D+  ++++I
Sbjct: 280 --AGAEDHSVCVWNTRTGERISVLEGHTDNLVNLRFSPDNRRLASASD---DSTVRIWNI 334

Query: 422 DL 423
            +
Sbjct: 335 SV 336



 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 75/227 (33%), Gaps = 20/227 (8%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG   +++ + D                +    FSP+   +A  + D      + L +
Sbjct: 26  VASGYEDSTIILWDPATGGRITELRGHTDTICALAFSPDSSLLASGSRD----CSIILWN 81

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLF 302
                    +      I    FS +GK+   S   D  + I+  D++    + L      
Sbjct: 82  VVAGEKTVALNGHDGFIDTLAFSPDGKKLA-SGSVDFTVRIW--DVERGEQQSLCKAHNA 138

Query: 303 INISASYSPDSSQIVFESDREGKEQL--YVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           + +  ++SPD +Q+       G       V  +    +  + +  +   +   ++P G  
Sbjct: 139 LVMVVTFSPDGTQLA-----SGSADCDTRVWDAETGMEISVLKGHQGVVYSVQFAPDGRR 193

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
           +A     G      V      +  ++       + +  +S  G+ L+
Sbjct: 194 LATASDDGTSV---VWHAKSGERLVIFREHSGPVWSTAFSSDGKRLL 237



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 10/152 (6%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            R  + A  +S NG    ++   +++  I            L        + ++SPDSS 
Sbjct: 10  HRGSVCALAYSPNG--LYVASGYEDSTIILWDPATGGRITELRGHTDTICALAFSPDSSL 67

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +   S       + +      ++       +       +SP G  +A        F + +
Sbjct: 68  LASGSR---DCSIILWNVVAGEKTVALNGHDGFIDTLAFSPDGKKLASGSVD---FTVRI 121

Query: 376 MKKDGSQERLL--VEDSNLQAPTWSPSGRSLI 405
              +  +++ L    ++ +   T+SP G  L 
Sbjct: 122 WDVERGEQQSLCKAHNALVMVVTFSPDGTQLA 153



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 77/266 (28%), Gaps = 49/266 (18%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K     +    R+WDV+  +Q                         QS+          
Sbjct: 108 KKLASGSVDFTVRIWDVERGEQ-------------------------QSLCKAHNALVMV 142

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + F  +     SG       V D +      +      +++  +F+P+ +++A A+ D  
Sbjct: 143 VTFSPDGTQLASGSADCDTRVWDAETGMEISVLKGHQGVVYSVQFAPDGRRLATASDDGT 202

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK------DEAMDIYSVD 288
            +    +   +              + +  FSS+GKR L           D       + 
Sbjct: 203 SV----VWHAKSGERLVIFREHSGPVWSTAFSSDGKRLLSVASDRTVKVCDSYSTEAILA 258

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +             +  +A +S D     F +       + V  +   ++  + +    +
Sbjct: 259 IDG--------AEGMVNAAVFSDDGE---FVAAGAEDHSVCVWNTRTGERISVLEGHTDN 307

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIG 374
             +  +SP    +A +        I 
Sbjct: 308 LVNLRFSPDNRRLA-SASDDSTVRIW 332


>gi|163841174|ref|YP_001625579.1| tolB protein precursor/tail-specific protease [Renibacterium
           salmoninarum ATCC 33209]
 gi|162954650|gb|ABY24165.1| tolB protein precursor/tail-specific protease [Renibacterium
           salmoninarum ATCC 33209]
          Length = 1176

 Score = 73.9 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 76/194 (39%), Gaps = 23/194 (11%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G       + D    ++   L      R+++      +  +SPD S++++   +    +L
Sbjct: 16  GDLVTFVAEDD----VWLAPLSGGRAWRVSSLGLPAKNPRFSPDGSKLLWTVIQGSVPEL 71

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI----GVMKKDGSQER 384
             +   G D +R++    AS     ++P G  +  + F   + ++     V   DGS+ +
Sbjct: 72  VCVPVAGGDLQRLTWFGHASTKFRGFTPDGSALVASAFEQPESSLTLGYAVSTTDGSRSQ 131

Query: 385 LLVE--DSNLQAPTW---------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           L     DS    P           SP  R   + ++  G T  KL+ +D +G  E +   
Sbjct: 132 LPYGPIDSIAYGPVVGDEKPLVISSPYSREPAWWKRYGGGTAGKLW-VDRDGSGEFVRLL 190

Query: 434 P---AYASDPQWVG 444
           P   +   DP W+G
Sbjct: 191 PELQSNLVDPMWIG 204



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 47/210 (22%), Positives = 80/210 (38%), Gaps = 24/210 (11%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             +         R+ +       PRFS +G + L +V +    ++  V +     +RLT 
Sbjct: 27  VWLAPLSGGRAWRVSSLGLPAKNPRFSPDGSKLLWTVIQGSVPELVCVPVAGGDLQRLTW 86

Query: 300 TLFINISAS-YSPDSSQIVFESDREGKEQL---YVMQSNGSDQKRISQDK-EASYFDPVW 354
               +     ++PD S +V  +  + +  L   Y + +    + ++     ++  + PV 
Sbjct: 87  FGHASTKFRGFTPDGSALVASAFEQPESSLTLGYAVSTTDGSRSQLPYGPIDSIAYGPVV 146

Query: 355 ---------SPQGDLIAFTKFSGEK--FAIGVMKKDGSQE--RLLVE-DSNLQAPTWSPS 400
                    SP     A+ K  G      + V  +DGS E  RLL E  SNL  P W   
Sbjct: 147 GDEKPLVISSPYSREPAWWKRYGGGTAGKLWV-DRDGSGEFVRLLPELQSNLVDPMWI-- 203

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           G  + F    +G     LYS+  NG+    
Sbjct: 204 GDRIAFLSDHEG--YGNLYSVKPNGKKLRR 231



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 81/247 (32%), Gaps = 26/247 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +    G    +   S       PRFSP+  K+ +       +  +  +        +
Sbjct: 26  DVWLAPLSGGRA-WRVSSLGLPAKNPRFSPDGSKLLWTVI-QGSVPELVCVPVAGGDLQR 83

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDI---YSVDLQSNATERLTNTL--FINIS 306
                 +      F+ +G   + S  +     +   Y+V     +  +L       I   
Sbjct: 84  LTWFGHASTKFRGFTPDGSALVASAFEQPESSLTLGYAVSTTDGSRSQLPYGPIDSIAYG 143

Query: 307 ASY---------SPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                       SP S +  +     G    +L+V +    +  R+  + +++  DP+W 
Sbjct: 144 PVVGDEKPLVISSPYSREPAWWKRYGGGTAGKLWVDRDGSGEFVRLLPELQSNLVDPMW- 202

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             GD IAF         +  +K +G + R   +         S  G+ ++F      ++ 
Sbjct: 203 -IGDRIAFLSDHEGYGNLYSVKPNGKKLRRHTDHEGFYVRHASTDGQRVVF------ESA 255

Query: 416 SKLYSID 422
             L+ +D
Sbjct: 256 GHLFLMD 262



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/118 (12%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---TKF 366
           SPD       ++      + ++       ++++     +  +  +SP    + +   T  
Sbjct: 466 SPDGKYAAIGTEHG---HVLLLDVAAGTLRQLAASTIGAIDELAFSPDSLWLVWSEPTSA 522

Query: 367 SGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             ++  I +    G       +      +P+++P G+ + F  ++  D     ++ DL
Sbjct: 523 GSDRAQIRLASVAGGDPIDATDGRFRDFSPSFTPDGKFIAFLSRRSFDPVYDTHNFDL 580



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 37/118 (31%), Gaps = 7/118 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---V 276
           SP+ +   YA    E    V L+D       +   +    I    FS +    + S    
Sbjct: 466 SPDGK---YAAIGTEHG-HVLLLDVAAGTLRQLAASTIGAIDELAFSPDSLWLVWSEPTS 521

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
              +   I    +        T+  F + S S++PD   I F S R           +
Sbjct: 522 AGSDRAQIRLASVAGGDPIDATDGRFRDFSPSFTPDGKFIAFLSRRSFDPVYDTHNFD 579


>gi|158341493|ref|YP_001522658.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158311734|gb|ABW33344.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1234

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 95/271 (35%), Gaps = 24/271 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            E++ +G    ++ + D       +       ++    FSP+   +A A +D+     V +
Sbjct: 756  ETLATGSEDGTVKLWDIRSGQCLWTGTGHSNMVNSVTFSPDGNLLASAAWDN----AVMV 811

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
               R      ++   +S+I    FS +GK    S      + I+ +         +    
Sbjct: 812  WSIRTRSCLAKLQGHQSIIWDAAFSPDGKWLA-SSDHQGVIRIWKI-ASYQCFRTIQAHA 869

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +    ++SPDS  +V      G+  + + + +    ++  Q      +   + P G  +
Sbjct: 870  SVIWGIAFSPDSQLLV---SSGGESMVKLWRVDTGVCQQTLQGYINRTWSVSFHPNGQTL 926

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            A     G    + V        R +            +S  G+ L  S  +DG    K++
Sbjct: 927  ANGHEDGT---LQVWDIHTGHNRQVFRGHQNWLWGVAFSHQGQILA-SACQDG--VVKVW 980

Query: 420  SIDLNG------RNETLINTPAYASDPQWVG 444
            S   +G       +   +   A++ D +W+ 
Sbjct: 981  SYP-DGHCLHSIEHGNRVFPLAFSPDGKWLA 1010



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 34/234 (14%)

Query: 197  DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
              DG  +  +       +F   FSP+ + +A    D      V L+        K++   
Sbjct: 982  YPDGHCLHSIEHGN--RVFPLAFSPDGKWLATGCDDS----FVRLLSVASGECLKQLIGH 1035

Query: 257  RSMILAPRFSSNGKRALISVQKDEAMDIY--------SVDLQSNATERLTNTLFINISAS 308
             + I    FS +G     S   D  + ++         +D+ +              S +
Sbjct: 1036 TNRIWGLAFSPSGHIMA-SGSDDLTVRLWYLESEESLVIDVGTRVR-----------SVA 1083

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPD   +   SD    E + +         R     +   +   +SP G+ +A      
Sbjct: 1084 FSPDGQILASGSD---YESIQLWSVEMRKCIRELPGHKQFIWSVAFSPDGECLASASQDQ 1140

Query: 369  EKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
                  +   +  +   + +    +  +  +SP G+++  +          L+S
Sbjct: 1141 TA---RLWSLETGECLQIFQGHTARVISVEFSPDGQTIATASDDGSVKLWDLHS 1191



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 67/201 (33%), Gaps = 14/201 (6%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            ++ +   D + +    +  T  D              +  FSS+G+  + +   D  + 
Sbjct: 583 SQLTFRQADFQGMTLHQIDLTGSDFRNCTFTQSFGAFFSVAFSSDGQSMV-TGGNDGQIT 641

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           I+ +       + L  T       +++PD+  +V  SD     ++ V      +  R+  
Sbjct: 642 IWDM-HSYQPLKILQGTGDWVWCVTFTPDAQYLVSGSD---DSKVRVWSVESGECLRVLS 697

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPS 400
                 +    SP G  +A          + +   D       + D +  +P    +SP 
Sbjct: 698 GHRDRVWSLDISPDGQTLATVSDDNT---LKLWSLDSGACLRTINDVHGASPKSICFSPH 754

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
             +L    +   D   KL+ I
Sbjct: 755 EETLATGSE---DGTVKLWDI 772



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 24/189 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISD---------- 160
            G+ +  G D   V  RL  V      KQ+IG        ++    H ++           
Sbjct: 1006 GKWLATGCDDSFV--RLLSVASGECLKQLIGHTNRIWGLAFSPSGHIMASGSDDLTVRLW 1063

Query: 161  --DIYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
              +  +S+  + G     + F  +     SG    S+ +   +        P   Q ++ 
Sbjct: 1064 YLESEESLVIDVGTRVRSVAFSPDGQILASGSDYESIQLWSVEMRKCIRELPGHKQFIWS 1123

Query: 217  PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              FSP+ + +A A+ D        L         +      + +++  FS +G+    + 
Sbjct: 1124 VAFSPDGECLASASQDQ----TARLWSLETGECLQIFQGHTARVISVEFSPDGQTIA-TA 1178

Query: 277  QKDEAMDIY 285
              D ++ ++
Sbjct: 1179 SDDGSVKLW 1187


>gi|289641260|ref|ZP_06473426.1| WD-40 repeat protein [Frankia symbiont of Datisca glomerata]
 gi|289508858|gb|EFD29791.1| WD-40 repeat protein [Frankia symbiont of Datisca glomerata]
          Length = 1947

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 105/331 (31%), Gaps = 26/331 (7%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++  G D   V  RLWD    +Q   ++        R +A   S D     T   G  
Sbjct: 1212 GTLLATGGDDRTV--RLWDTTTGRQ--TRELSGHTGPVRAVA--FSPD---GATLATGGD 1262

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            ++ +   + +      +    +    G++  +      +      +  +    AY  +  
Sbjct: 1263 DTAVHLWAATAEPDSRQPRRIIDHAHGSHGAHEAHDSHRSHD--AYDSHGSHDAYGAHGT 1320

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                  Y       R  +  G  R    + A  FS +G     +   +  + ++      
Sbjct: 1321 YGTHSTYEAREAGARDDRPGGRDRGAPRVRAVAFSPDGTLLA-TGGDNGTVRLWEA-TSG 1378

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                 L          ++SP+ + +   S  +   +L+   + G    ++++  +     
Sbjct: 1379 RPARVLPGHTGAVWPVAFSPEGTTLA-TSGDDHTVRLWDAPT-GQQTGQLTRHTDH-VHA 1435

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +SP G  +A T        +  +        L    S +++  +SP G +L       
Sbjct: 1436 VAFSPDGTTLA-TGGDDGTVHLWDVVSSRRTAMLHGHASAVRSVAFSPDGTTLA---TGG 1491

Query: 412  GDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             D   +L+   L G+    +       DP W
Sbjct: 1492 TDRTLRLWD-PLGGQETGRLAGRG---DPVW 1518



 Score = 73.9 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 47/345 (13%), Positives = 101/345 (29%), Gaps = 71/345 (20%)

Query: 160  DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            D +   +     +  S +     ++++      + ++D DG             +    F
Sbjct: 1149 DRVEAMLLPPAREPRSIVFAPDSTLLAACWGRQVLLVDPDGLRPLRTLTGHTGTVRAAAF 1208

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+   +A       D   V L DT   R  + +      + A  FS +G     +   D
Sbjct: 1209 SPDGTLLA----TGGDDRTVRLWDTTTGRQTRELSGHTGPVRAVAFSPDGATLA-TGGDD 1263

Query: 280  EAMDIY--SVDLQSNATERLTNTLFINISA-----------SYSPDSSQIVFES------ 320
             A+ ++  + +  S    R+ +    +  A           +Y    S   + +      
Sbjct: 1264 TAVHLWAATAEPDSRQPRRIIDHAHGSHGAHEAHDSHRSHDAYDSHGSHDAYGAHGTYGT 1323

Query: 321  -------------DREG--------------------------KEQLYVMQSNGSDQKRI 341
                         DR G                             + + ++      R+
Sbjct: 1324 HSTYEAREAGARDDRPGGRDRGAPRVRAVAFSPDGTLLATGGDNGTVRLWEATSGRPARV 1383

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSP 399
                  + +   +SP+G  +A    SG+   + +      Q+  +L     ++ A  +SP
Sbjct: 1384 LPGHTGAVWPVAFSPEGTTLA---TSGDDHTVRLWDAPTGQQTGQLTRHTDHVHAVAFSP 1440

Query: 400  SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             G +L        D    L+ +  + R   L    +      +  
Sbjct: 1441 DGTTLA---TGGDDGTVHLWDVVSSRRTAMLHGHASAVRSVAFSP 1482



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 69/204 (33%), Gaps = 14/204 (6%)

Query: 168  GEKGDFNSRILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
             ++G    R +  S       +G    ++ + +        + P     ++   FSP   
Sbjct: 1342 RDRGAPRVRAVAFSPDGTLLATGGDNGTVRLWEATSGRPARVLPGHTGAVWPVAFSPEGT 1401

Query: 225  KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
             +A       D   V L D    +   ++      + A  FS +G     +   D  + +
Sbjct: 1402 TLA----TSGDDHTVRLWDAPTGQQTGQLTRHTDHVHAVAFSPDGTTLA-TGGDDGTVHL 1456

Query: 285  YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQ 343
            + V + S  T  L        S ++SPD + +       G ++ L +    G  +     
Sbjct: 1457 WDV-VSSRRTAMLHGHASAVRSVAFSPDGTTLA----TGGTDRTLRLWDPLGGQETGRLA 1511

Query: 344  DKEASYFDPVWSPQGDLIAFTKFS 367
             +    +   +SP G  +A +  +
Sbjct: 1512 GRGDPVWAVAFSPDGTTLATSHST 1535



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 66/215 (30%), Gaps = 34/215 (15%)

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISA----- 307
            G  R+   A  FS +G    +  + D  + ++  D+ +     RLT       S      
Sbjct: 1684 GAGRTAATAIAFSPDGATLAV-GEPDGTIRLW--DITTGHPIGRLT-HPTDQTSPDRTTT 1739

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK----------------EASYFD 351
            S + D       +DR G        + G    R S  +                +A+   
Sbjct: 1740 SGATDRG----TADRTGHSGTARGSAGGGAAGRDSTGRGSAGREDGAGHGGDGRDAAAMA 1795

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +SP G  +A          +  +        L      ++A T+SP G  L       
Sbjct: 1796 IAFSPDGAALA-VGRDDGTVRLSTIATGRQAGLLTGHIGAVRAVTFSPDGSLLA---TGG 1851

Query: 412  GDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
             D   +L++I       + + T    +   W   +
Sbjct: 1852 DDGTVRLWTIGAGSSTGSTVATMVSFAAGGWSVLL 1886



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 6/120 (5%)

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             +A  FS +G  A ++V +D+     S          LT  +    + ++SPD S +   
Sbjct: 1793 AMAIAFSPDG--AALAVGRDDGTVRLSTIATGRQAGLLTGHIGAVRAVTFSPDGSLLATG 1850

Query: 320  SDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             D +G  +L+ + +  S      +    A+    V  P G            F   V+K 
Sbjct: 1851 GD-DGTVRLWTIGAGSSTGSTVATMVSFAAGGWSVLLPDGS--VKIDGDPANFLWWVVKL 1907


>gi|314966164|gb|EFT10263.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL082PA2]
 gi|314982029|gb|EFT26122.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL110PA3]
 gi|315090843|gb|EFT62819.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL110PA4]
 gi|315104287|gb|EFT76263.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL050PA2]
 gi|327328165|gb|EGE69934.1| tricorn protease protein [Propionibacterium acnes HL103PA1]
          Length = 1086

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLTTGDQRRLTWLGAARN 89

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G    R+ +       D   S  G + 
Sbjct: 90  LVVGWQDDEHVVFSSPHQTNDVGLTWLYTVSLDG----RVERLGYGPGMDLAVSSDGAVA 145

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +          L+ + N     ++ +GR        
Sbjct: 146 VVTPNSGDCSRWKRYRGGTAAQIWLQPAGAETFLRLLREGNDNHDGYAAAGRYSVGWIDG 205

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 206 RLIFSSDMSDDDCPQAQAQVWSVDGQGHDLRQHTHHGEAEGYVRDPR 252



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 65/168 (38%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 9   PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A      W    + + F+            +  +  DG
Sbjct: 65  RPEVFVIDLTTGDQRRLTWLGAARNLVVGWQDD-EHVVFSSPHQTNDVGLTWLYTVSLDG 123

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 124 RVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 170



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 91/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 23  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLTTGDQRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +  L   +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 81  LTWLGAARNLVVGW-QDDEHVVFSSPHQTNDVGLTWLYTVSLDGR-VERLGYGPGMDL-- 136

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 137 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLQPAGAETFLRLLREGNDNHDGYAAAG 196

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  +  +   G   R        +     P   G 
Sbjct: 197 RYSVGWIDGRLIFSSDMSDDDCPQAQAQVWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 256

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 257 TIVY------HTHGALWRMTGLDAEPERL 279



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNTL-FINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+        +  + +PD +++   S      ++
Sbjct: 351 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGRIGRVLHIAPAPDGTKVALISH---DGRI 407

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 408 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 467

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 468 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 526

Query: 442 WVGF 445
              F
Sbjct: 527 -SPF 529



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 56/169 (33%), Gaps = 17/169 (10%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 371 GTGEIRRIAQG---RIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 420

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 421 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 480

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER--LTNTLFINISAS 308
            F+++GK   +   +  D   D  + DL    T+R  L        S  
Sbjct: 481 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEASPF 529


>gi|159897319|ref|YP_001543566.1| hypothetical protein Haur_0790 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159890358|gb|ABX03438.1| hypothetical protein Haur_0790 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 343

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 49/209 (23%), Positives = 75/209 (35%), Gaps = 42/209 (20%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESDREGKE----- 326
           IS+      D++  DL +    +LTN      +   S +PD   +V+ S R         
Sbjct: 37  ISLIISRGGDLWRFDLPAKQWTQLTNEAPNAYSTFPSIAPDGKSVVY-SYRPPVPTPSAE 95

Query: 327 QLYVMQSNGSDQKRISQDKEASYF-----------------DPVWSPQGDLIAFTKF--- 366
           Q +V+  N ++Q  +      S F                  PVWSP G  +        
Sbjct: 96  QPFVVPVNHANQIAVDGGASKSLFVPDGGKRDGLQIYDSLDTPVWSPDGKTLYGVYQTLR 155

Query: 367 --SGEKF-----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             +   F     +I  +      ++ LV       P+ SP GR L F R +DG     LY
Sbjct: 156 FDNDGVFLQSGSSIVAIDLASGVQQTLVMTGTF--PSVSPDGRQLAFVRTRDG-IYPTLY 212

Query: 420 SIDLNGRNETLI-NTPAYAS---DPQWVG 444
             DL  + E ++ + P   S    P W  
Sbjct: 213 LYDLQTKQERVLFDQPNLVSALEAPIWSA 241



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 67/233 (28%), Gaps = 44/233 (18%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-----APRFSSNGKR 271
           P +SP+ + +               + +        + +     L      P  S +G++
Sbjct: 138 PVWSPDGKTLYGVYQTLRFDNDGVFLQSGSSIVAIDLASGVQQTLVMTGTFPSVSPDGRQ 197

Query: 272 ALISVQKDE-AMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDRE--GK 325
                 +D     +Y  DLQ+     L +   +     +  +S D   I   +     G+
Sbjct: 198 LAFVRTRDGIYPTLYLYDLQTKQERVLFDQPNLVSALEAPIWSADGKTIYIAASPLTIGQ 257

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            Q   +         ++          VWS     +A  +       I          R+
Sbjct: 258 HQPNWVDWF------VTPASAHGLGWQVWSVD---LATGQGKPVNSEIF------EDPRI 302

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +V+ S L   T+S                   L+ +DL G    LI  P    
Sbjct: 303 VVDGSLLYVWTFS------------------GLWQMDLVGNPPVLIEEPGDIG 337


>gi|314923822|gb|EFS87653.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL001PA1]
          Length = 1086

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQRPEVFVIDLTTGDQRRLTWLGAARN 89

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G    R+ +       D   S  G + 
Sbjct: 90  LVVGWQDDEHVVFSSPHQTNDVGLTWLYTVSLDG----RVERLGYGPGMDLAVSSDGAVA 145

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +          L+ + N     ++ +GR        
Sbjct: 146 VVTPNSGDCSRWKRYRGGTAAQIWLQPAGAETFLRLLREGNDNHDGYAAAGRYSVGWIDG 205

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 206 RLIFSSDMSDDDCPQAQAQVWSVDGQGHDLRQHTHHGEAEGYVRDPR 252



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 65/168 (38%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 9   PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTSYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A      W    + + F+            +  +  DG
Sbjct: 65  RPEVFVIDLTTGDQRRLTWLGAARNLVVGWQDD-EHVVFSSPHQTNDVGLTWLYTVSLDG 123

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 124 RVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 170



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 80/253 (31%), Gaps = 24/253 (9%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP--NQQKVAY 228
           G  + R++F S+       +    V   DG        +           P  +   + Y
Sbjct: 201 GWIDGRLIFSSDMSDDDCPQAQAQVWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGTTIVY 260

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALISVQKDEAMDI-- 284
            T+            T +D  P+R+     +   PR       +   +         +  
Sbjct: 261 HTHG------ALWRMTGLDAEPERLEIDLGIGAPPRMPLDPTDRLEAVVSDHGGDGSLLE 314

Query: 285 -----YSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNG-SD 337
                Y +  +S     L+    + I        + Q V+ SD +G++ L V   +G  +
Sbjct: 315 WRGAAYFLTHRSGPARALSAADGVRIREPRVLGQTGQGVWASDVDGEDCLEVANLDGTGE 374

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAP 395
            +RI+Q +         +P G  +A     G    I ++       R + +         
Sbjct: 375 IRRIAQGRIGRVLHIAPAPDGTKVALISHDG---RILIVTIADGAIREIGKSLEGEASGL 431

Query: 396 TWSPSGRSLIFSR 408
            WSP  R +++  
Sbjct: 432 AWSPDSRYVVWRS 444



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 91/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+ +Y       V+++D       +
Sbjct: 23  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTSY-LGQRPEVFVIDLTTGDQRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +  L   +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 81  LTWLGAARNLVVGW-QDDEHVVFSSPHQTNDVGLTWLYTVSLDGR-VERLGYGPGMDL-- 136

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 137 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLQPAGAETFLRLLREGNDNHDGYAAAG 196

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  +  +   G   R        +     P   G 
Sbjct: 197 RYSVGWIDGRLIFSSDMSDDDCPQAQAQVWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 256

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 257 TIVY------HTHGALWRMTGLDAEPERL 279



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNTL-FINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+        +  + +PD +++   S      ++
Sbjct: 351 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGRIGRVLHIAPAPDGTKVALISH---DGRI 407

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 408 LIVTIADGAIREIGKSLEGEASGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 467

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 468 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 526

Query: 442 WVGF 445
              F
Sbjct: 527 -SPF 529



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 49/156 (31%), Gaps = 12/156 (7%)

Query: 193 LCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L V + DG   IR +   R   +     +P+  KVA  ++D     R+ ++        +
Sbjct: 364 LEVANLDGTGEIRRIAQGRIGRVLHIAPAPDGTKVALISHDG----RILIVTIADGAIRE 419

Query: 252 RIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSV---DLQS-NATERLTNTLFINIS 306
              +         +S + +  +  S        I  +   D Q       LT   F +  
Sbjct: 420 IGKSLEGEASGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSC 479

Query: 307 ASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKR 340
             ++ D   +   S R  +          +    +R
Sbjct: 480 PVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQR 515


>gi|302534934|ref|ZP_07287276.1| protease [Streptomyces sp. C]
 gi|302443829|gb|EFL15645.1| protease [Streptomyces sp. C]
          Length = 1148

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 66/191 (34%), Gaps = 16/191 (8%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           RI   R+ +  PRFS +G+    +  +    +I+   +      RL++    +     + 
Sbjct: 104 RITVDRTRVGHPRFSPDGRHIAFTTWRSLDPEIHLAPVDGGPARRLSHWGSTDTRVCGWD 163

Query: 311 PDSSQIVFESDREGKEQL---YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           PD + +   S  +        Y + ++GS   R+     +         +   +  T   
Sbjct: 164 PDGNVLAVSSHGQPFSYYSWAYKLPTDGSPGGRLPWGPVSDIQVADVDGEHRSLLLTGKP 223

Query: 368 GEKFAIGVMKKDGSQERLLVED--------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             + A     + G+  RL +           +L++P +   G  + F    +G     LY
Sbjct: 224 PHEPAAWKRYRGGATGRLWLHGQRLLEDIEGHLESPMFV--GGRIAFLSDHEG--IGNLY 279

Query: 420 SIDLNGRNETL 430
           S   +G     
Sbjct: 280 SCLPDGTGLRR 290



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 22/152 (14%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               R+T          +SPD   I F + R    ++++   +G   +R+S         
Sbjct: 100 GRAWRITVDRTRVGHPRFSPDGRHIAFTTWRSLDPEIHLAPVDGGPARRLSHWGSTDTRV 159

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             W P G+++A +   G+ F+           +L  +         SP GR         
Sbjct: 160 CGWDPDGNVLAVSSH-GQPFSYYSW-----AYKLPTDG--------SPGGRL-------P 198

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDP-QW 442
               S +   D++G + +L+ T     +P  W
Sbjct: 199 WGPVSDIQVADVDGEHRSLLLTGKPPHEPAAW 230



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 73/235 (31%), Gaps = 33/235 (14%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            PRFSP+ + +A+ T+   D   ++L       A +      +      +  +G    +S
Sbjct: 114 HPRFSPDGRHIAFTTWRSLDP-EIHLAPVDGGPARRLSHWGSTDTRVCGWDPDGNVLAVS 172

Query: 276 VQK---DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-------------VFE 319
                       Y +    +   RL      +I  +   D                  ++
Sbjct: 173 SHGQPFSYYSWAYKLPTDGSPGGRLPWGPVSDIQVA-DVDGEHRSLLLTGKPPHEPAAWK 231

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             R G      +  +G   +R+ +D E     P++   G  IAF         +     D
Sbjct: 232 RYRGGATG--RLWLHG---QRLLEDIEGHLESPMFV--GGRIAFLSDHEGIGNLYSCLPD 284

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID--LNGRNETLIN 432
           G+  R   +     A   S  G  +++           ++ +D   +G +   + 
Sbjct: 285 GTGLRRHTDHDEFYARHASSDGSRVVY------QCAGDIWLVDSLADGASPRKLP 333



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 49/300 (16%), Positives = 97/300 (32%), Gaps = 27/300 (9%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMD--RDGANIRYLT------PSRDQILFEPR 218
             +  +F +R      S V       + ++D   DGA+ R L        +  +    P 
Sbjct: 291 HTDHDEFYARHASSDGSRVVYQCAGDIWLVDSLADGASPRKLPVRLGGPRAGRRTYQVPA 350

Query: 219 FSPNQQKVAYATYDDEDILRV---YLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALI 274
            S N   ++  T      + V       T  D   + I +   + +  P    +G +   
Sbjct: 351 AS-NVDSLSVDTTGRASAVVVRGSLYWLTHRDGPARTIADTPGVRVRLPEMLGSGGQVAY 409

Query: 275 SVQKDEAMDIYS--VDLQSN--ATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLY 329
               +    I    +   S      RL +            PD  ++   S       L 
Sbjct: 410 VTDAEGEDAIEIAYLPRASGDREPRRLASGELGRVTELLSDPDGERLAIASHDGRLLLLD 469

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLV 387
             + +  +   + +       D  +SP G  + ++     +    I + K  G   R++V
Sbjct: 470 ATEESNGEVTELIRSINGPVTDLAFSPDGCWLTWSHPGIGRSLRQIKMAKISGPGARVVV 529

Query: 388 EDSN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
           + +N     + P ++  GR L F   +  D    +++ DL+   G    L+   +    P
Sbjct: 530 DVTNGRFEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSP 589



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 48/148 (32%), Gaps = 10/148 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ +++A A++D   +L +   +       + I +    +    FS +G     S     
Sbjct: 451 PDGERLAIASHD-GRLLLLDATEESNGEVTELIRSINGPVTDLAFSPDGCWLTWSHPGIG 509

Query: 281 A--MDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYV----M 331
                I    +       +   TN  F + +  ++ D   + F S R       V    +
Sbjct: 510 RSLRQIKMAKISGPGARVVVDVTNGRFEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDL 569

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 +  +     A+     +SP G 
Sbjct: 570 SFPLGCRPYLVPLSSATPSPFAFSPDGR 597



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 66/207 (31%), Gaps = 21/207 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP- 250
            + +   DG   R L+           + P+   +A +++        +      D +P 
Sbjct: 135 EIHLAPVDGGPARRLSHWGSTDTRVCGWDPDGNVLAVSSHGQPFSYYSWAYKLPTDGSPG 194

Query: 251 -KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--------LTNTL 301
            +      S I         +  L++ +       +    +  AT R        L +  
Sbjct: 195 GRLPWGPVSDIQVADVDGEHRSLLLTGKPPHEPAAWK-RYRGGATGRLWLHGQRLLEDIE 253

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S  +     +I F SD EG   LY    +G+  +R +   E  ++    S  G  +
Sbjct: 254 GHLESPMFV--GGRIAFLSDHEGIGNLYSCLPDGTGLRRHTDHDE--FYARHASSDGSRV 309

Query: 362 AFTKFSGEKFAIGVMK--KDGSQERLL 386
            +         I ++    DG+  R L
Sbjct: 310 VYQCAGD----IWLVDSLADGASPRKL 332


>gi|119493596|ref|ZP_01624260.1| Serine/Threonine protein kinase with WD40 repeats [Lyngbya sp. PCC
           8106]
 gi|119452586|gb|EAW33769.1| Serine/Threonine protein kinase with WD40 repeats [Lyngbya sp. PCC
           8106]
          Length = 650

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 91/242 (37%), Gaps = 21/242 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D      R       + +    FSP+ Q +A  + D      + L D +
Sbjct: 426 SGSNDKTIRLWDLKQGIRRRTIEGHTESVNTLAFSPDGQTLASGSDDR----TIRLWDLK 481

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLF 302
                  I      + +  FS +G+    S   D+ + ++ +   +  T +LT   ++  
Sbjct: 482 TGARILTIPAHDGPVNSIAFSPDGQTLA-SGSSDQTIKLWGL---TQGTRKLTISGHSGA 537

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           IN  A Y+ D   +   SD      + +   N  DQ R+   + +     V SP G  + 
Sbjct: 538 INDIA-YTTDGQSLGSVSD---DGTIRLWNPNTGDQVRLFSAQGSDVKSMVISPDGQTL- 592

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           F+    ++  I  +K    +  L      + A   SP+G  L+       D   K++ + 
Sbjct: 593 FS--GSDRIIIWDLKTGEQKATLWGHAQTVNALALSPNGEILV---SGSEDKTIKIWQVP 647

Query: 423 LN 424
           +N
Sbjct: 648 VN 649



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 76/222 (34%), Gaps = 18/222 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D     + Y   +    +     SP+ + +A  + D      + L D +     + 
Sbjct: 391 ITIWDLQTGKLLYSIAAHSSWVKALAISPDGEILASGSNDK----TIRLWDLKQGIRRRT 446

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYS 310
           I      +    FS +G+    S   D  + ++  DL++     LT         S ++S
Sbjct: 447 IEGHTESVNTLAFSPDGQTLA-SGSDDRTIRLW--DLKTG-ARILTIPAHDGPVNSIAFS 502

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +   S     + + +       +K        +  D  ++  G  +      G  
Sbjct: 503 PDGQTLASGSS---DQTIKLWGLTQGTRKLTISGHSGAINDIAYTTDGQSLGSVSDDGT- 558

Query: 371 FAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKK 410
             I +   +   +  L   + S++++   SP G++L     +
Sbjct: 559 --IRLWNPNTGDQVRLFSAQGSDVKSMVISPDGQTLFSGSDR 598



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 67/194 (34%), Gaps = 14/194 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG    ++ + D          P+ D  +    FSP+ Q +A  + D      + L
Sbjct: 464 QTLASGSDDRTIRLWDLKTGARILTIPAHDGPVNSIAFSPDGQTLASGSSDQ----TIKL 519

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                      I      I    ++++G+    SV  D  + ++  +  +    RL +  
Sbjct: 520 WGLTQGTRKLTISGHSGAINDIAYTTDGQSLG-SVSDDGTIRLW--NPNTGDQVRLFSAQ 576

Query: 302 FINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             ++ S   SPD   +   SDR     + +      +QK        +      SP G+ 
Sbjct: 577 GSDVKSMVISPDGQTLFSGSDR-----IIIWDLKTGEQKATLWGHAQTVNALALSPNGE- 630

Query: 361 IAFTKFSGEKFAIG 374
           I  +    +   I 
Sbjct: 631 ILVSGSEDKTIKIW 644



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 77/220 (35%), Gaps = 19/220 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ Q +   ++ +     + + D +  +    I    S + A   S +G   L S  
Sbjct: 375 AISPDGQTLVAGSFGN-----ITIWDLQTGKLLYSIAAHSSWVKALAISPDG-EILASGS 428

Query: 278 KDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            D+ + ++  DL+     R    +T  +N  A +SPD   +   SD      + +     
Sbjct: 429 NDKTIRLW--DLKQGIRRRTIEGHTESVNTLA-FSPDGQTLASGSD---DRTIRLWDLKT 482

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
             +       +       +SP G  +A +  S +   +  + +   +  +      +   
Sbjct: 483 GARILTIPAHDGPVNSIAFSPDGQTLA-SGSSDQTIKLWGLTQGTRKLTISGHSGAINDI 541

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            ++  G+SL        D   +L++ +  G    L +   
Sbjct: 542 AYTTDGQSL---GSVSDDGTIRLWNPN-TGDQVRLFSAQG 577


>gi|37522457|ref|NP_925834.1| WD repeat-containing protein [Gloeobacter violaceus PCC 7421]
 gi|35213458|dbj|BAC90829.1| WD-repeat protein [Gloeobacter violaceus PCC 7421]
          Length = 1081

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 64/395 (16%), Positives = 123/395 (31%), Gaps = 62/395 (15%)

Query: 60  ELGGKVSE-------VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLV 112
            LG  +S+       V   DLQR      + + SF +         +       G  ++ 
Sbjct: 420 ALGTDLSDWDFSGLCVWQADLQR----APLRRTSFARADLRGSVFGQ----TFAGILLVA 471

Query: 113 T---GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
               G V+  G D    E RL    D +Q             R   HT  D +       
Sbjct: 472 FNPEGTVLAIGDDS--GEIRLLRAADGQQ-----------QARCTGHT--DALCAMAFHP 516

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G            + SG    S+ +                  ++   F+P+ + +A  
Sbjct: 517 EG----------NLLASGSEDLSVKLWAAGSGQCLATLTGHTGWVYAVAFAPDGRTLASG 566

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D      V L D       K +        +  F+ +G+    +     A+ ++ V  
Sbjct: 567 SVDG----TVRLWDVGTGLCLKILCEPGGQFWSVAFAPDGQTLA-TAGHGHAIKLWQVS- 620

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                  L        S ++SPD   +   +  +G  +L+           + +   +  
Sbjct: 621 SGACALSLEGHTAQVRSVAFSPDGRTLA-SAGVDGTVRLW--DVPLGACLMVLEGHTSRV 677

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
               +SP G L+A +    +   +  ++  G   R+L      + +  + P+GR+L    
Sbjct: 678 RTVAFSPGGHLLA-SGGHDQTVRLWEVR-SGRCLRVLPGHTGQVWSLAFHPNGRTLASGS 735

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
               D   +L+ +D     +T      +     W 
Sbjct: 736 M---DQTVRLWEVDSGRSLKTFQGNSGWI----WS 763



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 47/342 (13%), Positives = 95/342 (27%), Gaps = 34/342 (9%)

Query: 117 IKEGKDRLRVEFRLWDVKDR----------KQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
                  +    RLWDV              Q     F     +     H  +  ++Q  
Sbjct: 561 RTLASGSVDGTVRLWDVGTGLCLKILCEPGGQFWSVAFAPDGQTLATAGHGHAIKLWQVS 620

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY---------LTPSRDQILFEP 217
           +G              SV       +L     DG    +         +       +   
Sbjct: 621 SGACALSLEGHTAQVRSVAFSPDGRTLASAGVDGTVRLWDVPLGACLMVLEGHTSRVRTV 680

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP    +A           V L + R  R  + +      + +  F  NG+    S  
Sbjct: 681 AFSPGGHLLA----SGGHDQTVRLWEVRSGRCLRVLPGHTGQVWSLAFHPNGRTLA-SGS 735

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGS 336
            D+ + ++ VD    + +          S ++ P    +   S DR     + +  +   
Sbjct: 736 MDQTVRLWEVD-SGRSLKTFQGNSGWIWSVAFHPGGHLLASGSMDR----LVRLWDTRTG 790

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
              +         +   + P G+++A   F  +   +  +      + L    + ++A  
Sbjct: 791 QCLKTLAGHGCWVWSLAFHPGGEILASGSFD-QTVKLWEVDTGRCIQSLAGHTNWIRAVA 849

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +SP G  +        D   +L++         L     +  
Sbjct: 850 FSPDGAQIA---SAGVDQTIRLWAWPAGNCTAVLTGHTGWVR 888



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/313 (12%), Positives = 86/313 (27%), Gaps = 39/313 (12%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA-----SWRKIAHTISDDIYQSITG--- 168
                   +    RLW+V   + +  K F  +       ++    H ++      +     
Sbjct: 729  RTLASGSMDQTVRLWEVDSGRSL--KTFQGNSGWIWSVAFHPGGHLLASGSMDRLVRLWD 786

Query: 169  -----------EKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
                         G +   + F        SG    ++ + + D              + 
Sbjct: 787  TRTGQCLKTLAGHGCWVWSLAFHPGGEILASGSFDQTVKLWEVDTGRCIQSLAGHTNWIR 846

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               FSP+  ++A A  D      + L           +      +    F  +G++   S
Sbjct: 847  AVAFSPDGAQIASAGVDQ----TIRLWAWPAGNCTAVLTGHTGWVRCVAFGPDGRQLA-S 901

Query: 276  VQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               D  + I+  D  +      L        + ++SPD S +   ++      + +    
Sbjct: 902  GSLDRTIKIW--DAATGECVATLGGHRGQICAVAFSPDGSLLASAAE---DHLVKLWNLA 956

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              +            +   ++P G  +A     G    +             +   + Q 
Sbjct: 957  TGECVATLAGHCGPVWSVAFAPDGLHLASC---GHDQVVRFWDAGSGALTATLRGHSDQV 1013

Query: 395  PTWS--PSGRSLI 405
             + +  P G +L 
Sbjct: 1014 WSVAYDPRGETLA 1026


>gi|308807044|ref|XP_003080833.1| TRI1_STRCO Tricorn protease homolog 1 ref|NP_626787.1| possible
           protease (ISS) [Ostreococcus tauri]
 gi|116059294|emb|CAL55001.1| TRI1_STRCO Tricorn protease homolog 1 ref|NP_626787.1| possible
           protease (ISS) [Ostreococcus tauri]
          Length = 1332

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 79/255 (30%), Gaps = 30/255 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           + S       P       +V +   DD    R+   + R     +R+         P  S
Sbjct: 43  STSEIGYYRWPAI--KGNEVYFVCEDDVYAARLDGSEGR-SATARRLTQAHGACQRPVVS 99

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESD---- 321
            +G +   S  +D  ++IY VD      ++LT+       +  +S D  ++ F S     
Sbjct: 100 PDGSKVAFSCVEDGYVEIYVVDSDGGPMKQLTHMGASYARACCFSEDGKRVYFTSSGASA 159

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-------------- 367
               E+ +V+        R+                G  +A    +              
Sbjct: 160 EPSGEEFWVVNIEAGAPMRLGIGPGQDLDVRTV--NGKELALVGRNTEDPGTAHWRGYAG 217

Query: 368 GEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           G    I +   D    R+   D    N     W      ++F+ + +G+       +++ 
Sbjct: 218 GAGGEIWIGSVD-KLVRIDSFDELTGNFGNARWLND-EHIVFTMEVNGNVNVYHARVEI- 274

Query: 425 GRNETLINTPAYASD 439
           G N   ++     +D
Sbjct: 275 GENTATLSDVTSVTD 289



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 54/151 (35%), Gaps = 10/151 (6%)

Query: 268 NGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASY---SPDSSQIVFESDRE 323
           +G+R +         DI    +      +RL     +         SP++  +   + R+
Sbjct: 419 DGERLVYVSDASGEDDIELHWEEADRPAKRLGLHHGLLGRVEILVPSPEAPLVAVVNHRD 478

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKF-SGEKFAIGVMKKDGS 381
               L ++     + +      E    D   WSP G+ +A+T + + ++  I ++     
Sbjct: 479 ---SLLIINVENGEMRTADSSSEGGGIDDLTWSPCGNWLAYTHYMNNDRSCIRILDVRNG 535

Query: 382 QERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
           +            +P W P G+ L F   ++
Sbjct: 536 KVFDATRPVLGDHSPAWDPDGKYLYFLGSRE 566



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 57/145 (39%), Gaps = 11/145 (7%)

Query: 312 DSSQIVFESDREGKEQL-YVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSG 368
           D  ++V+ SD  G++ +    +      KR+             V SP+  L+A      
Sbjct: 419 DGERLVYVSDASGEDDIELHWEEADRPAKRLGLHHGLLGRVEILVPSPEAPLVAVVNHRD 478

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGR- 426
               I V   +        E   +   TWSP G  L ++   + D    +  +D+ NG+ 
Sbjct: 479 SLLIINVENGEMRTADSSSEGGGIDDLTWSPCGNWLAYTHYMNNDRSC-IRILDVRNGKV 537

Query: 427 -NETLI----NTPAYASDPQWVGFM 446
            + T      ++PA+  D +++ F+
Sbjct: 538 FDATRPVLGDHSPAWDPDGKYLYFL 562



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 1/61 (1%)

Query: 264 RFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            +S  G     +    ++   I  +D+++      T  +  + S ++ PD   + F   R
Sbjct: 506 TWSPCGNWLAYTHYMNNDRSCIRILDVRNGKVFDATRPVLGDHSPAWDPDGKYLYFLGSR 565

Query: 323 E 323
           E
Sbjct: 566 E 566



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 25/74 (33%), Gaps = 4/74 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP    +AY  Y + D   + ++D R  +             +P +  +GK       
Sbjct: 506 TWSPCGNWLAYTHYMNNDRSCIRILDVRNGKVFDATRPVLG-DHSPAWDPDGKYLYFLGS 564

Query: 278 KDEAMDIYSVDLQS 291
           ++        D  +
Sbjct: 565 RELEP---VYDAAT 575



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 66/201 (32%), Gaps = 35/201 (17%)

Query: 164 QSITGEKGDFNSRILFVSESVVS----GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           + +T   G     ++    S V+          + V+D DG  ++ LT           F
Sbjct: 84  RRLTQAHGACQRPVVSPDGSKVAFSCVEDGYVEIYVVDSDGGPMKQLTHMGASYARACCF 143

Query: 220 SPNQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           S + ++V + +     +      ++++     AP R+G      L  R + NGK   +  
Sbjct: 144 SEDGKRVYFTSSGASAEPSGEEFWVVNIEAG-APMRLGIGPGQDLDVR-TVNGKELALVG 201

Query: 277 QK----------------DEAMDIYSVD----LQSNATERLTNTLFINISASYSPDSSQI 316
           +                    + I SVD    + S     LT        A +  D   I
Sbjct: 202 RNTEDPGTAHWRGYAGGAGGEIWIGSVDKLVRIDSFDE--LTGNFGN---ARWLND-EHI 255

Query: 317 VFESDREGKEQLYVMQSNGSD 337
           VF  +  G   +Y  +    +
Sbjct: 256 VFTMEVNGNVNVYHARVEIGE 276


>gi|9931971|gb|AAB81475.2| general transcriptional repressor Tup1 [Schizosaccharomyces pombe]
          Length = 561

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 24/210 (11%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              D  +    FSP+ + +A    D     ++ + D    R  + +      I +  FS 
Sbjct: 306 REGDLYVRSVAFSPDGKYLATGVEDQ----QIRIWDIAQKRVYRLLTGHEQEIYSLDFSK 361

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +GK  +          +   D+++   + + +T     +  +SPD   I   S     + 
Sbjct: 362 DGKTLV---SGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSL---DKV 415

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG----------VMK 377
           + +  S+G+  +++    E S +   +SP G  +           +            M 
Sbjct: 416 IRIWTSSGTLVEQL-HGHEESVYSVAFSPDGKYLVSGSLDNT-IKLWELQCVSNVAPSMY 473

Query: 378 KDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
           K+G   +           + T SP G+ +I
Sbjct: 474 KEGGICKQTFTGHKDFILSVTVSPDGKWII 503



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 76/201 (37%), Gaps = 17/201 (8%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVY---LMDTRIDRAPKRIGNFRSMILAPRFS 266
              ++   RFS + + +A        +  V    L+    + + KR G+    + +  FS
Sbjct: 261 HTSVICYVRFSADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDL--YVRSVAFS 318

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
            +GK    +  +D+ + I+  D+      R LT       S  +S D   +V  S   G 
Sbjct: 319 PDGKYLA-TGVEDQQIRIW--DIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGS---GD 372

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +      +QK I    +      ++SP G  IA          I +    G+    
Sbjct: 373 RTVCLWDVEAGEQKLILHTDDG-VTTVMFSPDGQFIAAGSLDK---VIRIWTSSGTLVEQ 428

Query: 386 LV-EDSNLQAPTWSPSGRSLI 405
           L   + ++ +  +SP G+ L+
Sbjct: 429 LHGHEESVYSVAFSPDGKYLV 449



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 24/227 (10%)

Query: 145 FSSPASWRKIAHTISDDIYQSIT-GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
                   +I       +Y+ +T  E+  ++       +++VSG    ++C+ D +    
Sbjct: 326 TGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQ 385

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +  + D +     FSP+ Q +A  + D   ++R++   T      +++      + + 
Sbjct: 386 KLILHTDDGVTTV-MFSPDGQFIAAGSLD--KVIRIW---TSSGTLVEQLHGHEESVYSV 439

Query: 264 RFSSNGKRALISVQKDEAMDIY----------SVDLQSNATER-LTNTLFINISASYSPD 312
            FS +GK  + S   D  + ++          S+  +    ++  T      +S + SPD
Sbjct: 440 AFSPDGKYLV-SGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPD 498

Query: 313 SSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              I+  S DR     +     +    +   Q    S      SP G
Sbjct: 499 GKWIISGSKDRT----IQFWSPDSPHSQLTLQGHNNSVISVAVSPNG 541


>gi|282897925|ref|ZP_06305920.1| WD40-like protein Beta Propeller protein [Raphidiopsis brookii D9]
 gi|281197069|gb|EFA71970.1| WD40-like protein Beta Propeller protein [Raphidiopsis brookii D9]
          Length = 186

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 4/124 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           NT +     ++S D   + F S+R G +QL V          I     +E    +P  S 
Sbjct: 44  NTRYTEQDPAFSGDGRFLAFVSNRSGSQQLLVYDLQNQGFAPIPGLNRRETIVENPSLSY 103

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  I +      K  I +  +   Q ++L       ++ P  SP GR ++F     G  
Sbjct: 104 TGRYICYLTSDRAKPVIALYDRATKQSQVLTPTYGGWIKNPDISPDGRYIVFQSAGRGQW 163

Query: 415 GSKL 418
             ++
Sbjct: 164 DIEV 167



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 5/127 (3%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSP 311
           N R     P FS +G+       +  +  +   DLQ+     +        I  + S S 
Sbjct: 44  NTRYTEQDPAFSGDGRFLAFVSNRSGSQQLLVYDLQNQGFAPIPGLNRRETIVENPSLSY 103

Query: 312 DSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
               I +  SDR  K  + +        + ++        +P  SP G  I F      +
Sbjct: 104 TGRYICYLTSDRA-KPVIALYDRATKQSQVLTPTYGGWIKNPDISPDGRYIVFQSAGRGQ 162

Query: 371 FAIGVMK 377
           + I V+ 
Sbjct: 163 WDIEVLD 169



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 2/128 (1%)

Query: 162 IYQSITGEKGDFNSRILFVSE-SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           +    T +   F+    F++  S  SG  +  +  +   G         R+ I+  P  S
Sbjct: 43  VNTRYTEQDPAFSGDGRFLAFVSNRSGSQQLLVYDLQNQGFAPIPGLNRRETIVENPSLS 102

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              + + Y T D    + + L D    ++      +   I  P  S +G+  +       
Sbjct: 103 YTGRYICYLTSDRAKPV-IALYDRATKQSQVLTPTYGGWIKNPDISPDGRYIVFQSAGRG 161

Query: 281 AMDIYSVD 288
             DI  +D
Sbjct: 162 QWDIEVLD 169



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 6/105 (5%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN----LQAPT 396
           +S +   +  DP +S  G  +AF         + V          +   +     ++ P+
Sbjct: 41  LSVNTRYTEQDPAFSGDGRFLAFVSNRSGSQQLLVYDLQNQGFAPIPGLNRRETIVENPS 100

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDP 440
            S +GR + +           LY      +++ L  T   +  +P
Sbjct: 101 LSYTGRYICYLTSDRAKPVIALYD-RATKQSQVLTPTYGGWIKNP 144



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 8/67 (11%)

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG--------RNETLINTPAYASD 439
                Q P +S  GR L F   + G     +Y +   G        R ET++  P+ +  
Sbjct: 45  TRYTEQDPAFSGDGRFLAFVSNRSGSQQLLVYDLQNQGFAPIPGLNRRETIVENPSLSYT 104

Query: 440 PQWVGFM 446
            +++ ++
Sbjct: 105 GRYICYL 111


>gi|163848188|ref|YP_001636232.1| hypothetical protein Caur_2637 [Chloroflexus aurantiacus J-10-fl]
 gi|222526093|ref|YP_002570564.1| hypothetical protein Chy400_2850 [Chloroflexus sp. Y-400-fl]
 gi|163669477|gb|ABY35843.1| conserved hypothetical protein [Chloroflexus aurantiacus J-10-fl]
 gi|222449972|gb|ACM54238.1| conserved hypothetical protein [Chloroflexus sp. Y-400-fl]
          Length = 678

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 80/245 (32%), Gaps = 31/245 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP------RFSSNGKRAL 273
           +P   +  Y  +D +         T  D   +R+    ++  +         S  G    
Sbjct: 259 APASLEPLYFLFDGDVWQLDLAFSTVGDGMTRRLAGAVNITDSAETETHLAVSPGGDYLA 318

Query: 274 ISVQKDEAM----------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
               +               ++ +       + L           +SPD + I F  D  
Sbjct: 319 FCRAEPGLDPADAVLAVPSTLWLLPRAGGEAQPLAQVGVSCADPVFSPDGATIAFAVDET 378

Query: 324 G----KEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           G    +  +Y +  +G + +R+ +   E S F P W   G L+   +    + A+ +   
Sbjct: 379 GAIPTQWTIYTVPVSGGEPERVEAALDEWSRFMPQWLSGGRLVYRAEAPDGRSALFLRLP 438

Query: 379 DG----------SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            G          + ERL+V      A   SP+G  +     +  D G+ L  +D  G+  
Sbjct: 439 TGEVRDVGAELLTDERLVVRYRGFGALIASPNGEYVAVEALRADDPGADLLILDSAGQLV 498

Query: 429 TLINT 433
             I T
Sbjct: 499 ERIGT 503


>gi|326799767|ref|YP_004317586.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphingobacterium sp. 21]
 gi|326550531|gb|ADZ78916.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphingobacterium sp. 21]
          Length = 736

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 13/111 (11%)

Query: 266 SSNGKRALISVQ----KDEAMDIYSVD----LQSN----ATERLTNTLFINISASYSPDS 313
           S + K  L +VQ    ++  +D Y  D    + +        +LT +       S+SP  
Sbjct: 60  SPDKKLILFNVQKIKGRESDVDNYEYDNQLWMANREEQYKLRQLTYSEQNPSQPSFSPRG 119

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S I+F    +GK QL++M  +G +  +++  K  +   P WSP G  I F+
Sbjct: 120 SDILFVRTVKGKPQLFLMSLSGGEPMQLTDFKYGA-SSPKWSPDGKKIVFS 169



 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 40/112 (35%), Gaps = 10/112 (8%)

Query: 219 FSPNQQKVAYATYDDEDIL----------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            SP+++ + +     +             ++++ +       +++         P FS  
Sbjct: 59  ISPDKKLILFNVQKIKGRESDVDNYEYDNQLWMANREEQYKLRQLTYSEQNPSQPSFSPR 118

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           G   L          ++ + L      +LT+  +   S  +SPD  +IVF +
Sbjct: 119 GSDILFVRTVKGKPQLFLMSLSGGEPMQLTDFKYGASSPKWSPDGKKIVFSA 170



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 12/112 (10%)

Query: 310 SPDSSQIVFE--------SDREGK---EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           SPD   I+F         SD +      QL++       + R     E +   P +SP+G
Sbjct: 60  SPDKKLILFNVQKIKGRESDVDNYEYDNQLWMANREEQYKLRQLTYSEQNPSQPSFSPRG 119

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
             I F +    K  + +M   G +   L +      +P WSP G+ ++FS  
Sbjct: 120 SDILFVRTVKGKPQLFLMSLSGGEPMQLTDFKYGASSPKWSPDGKKIVFSAT 171



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 36/94 (38%), Gaps = 2/94 (2%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +    N L + +R+           +Q   +P FSP    + +            +  
Sbjct: 80  VDNYEYDNQLWMANREEQYKLRQLTYSEQNPSQPSFSPRGSDILFVRTVKGKPQLFLM-- 137

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +     P ++ +F+    +P++S +GK+ + S  
Sbjct: 138 SLSGGEPMQLTDFKYGASSPKWSPDGKKIVFSAT 171



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 41/105 (39%), Gaps = 16/105 (15%)

Query: 354 WSPQGDLIAFT--KFSGEKFAIGVMKKDGS----------QERLLV-EDSNLQAPTWSPS 400
            SP   LI F   K  G +  +   + D            + R L   + N   P++SP 
Sbjct: 59  ISPDKKLILFNVQKIKGRESDVDNYEYDNQLWMANREEQYKLRQLTYSEQNPSQPSFSPR 118

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQWVG 444
           G  ++F R   G    +L+ + L+ G    L +    AS P+W  
Sbjct: 119 GSDILFVRTVKGK--PQLFLMSLSGGEPMQLTDFKYGASSPKWSP 161



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 100/298 (33%), Gaps = 51/298 (17%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +   K  L +M   G     LT  +      P++SP+ +K+ ++     + L    + 
Sbjct: 125 VRTVKGKPQLFLMSLSGGEPMQLTDFKYG-ASSPKWSPDGKKIVFSATLKLEELLQDSLL 183

Query: 244 TRIDRAPKRIGNFRSM-------ILAPRFSSNGKRA---LISVQKDEAMDIYSVD----- 288
               + P  +                 + + NG  A       Q +       ++     
Sbjct: 184 NPKQQLPLWLSEKPGYRDNHYLGKSDAKANPNGNLAEVRAYLAQNEREYKAKVINKLQFQ 243

Query: 289 --LQSNATERLTNTLFI---NISASYSPDSSQIVFES----------------------- 320
               +++  R T+   I   + +   +P +    F S                       
Sbjct: 244 GEAATSSEMRFTHLFVISVLDGAPQTAPRAITTGFNSYSDPYFCNNDQIVVNGRLSDTIF 303

Query: 321 -DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---SGEKFAIGVM 376
            DR  +  +Y +  +    ++I   KE SY     SP G+ + +++    +    ++ VM
Sbjct: 304 PDRALESAVYKISLSNPLPQKILGKKELSYRINTVSPFGNYLIYSESMVATPNVPSVHVM 363

Query: 377 KKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
               S+    ++ D N+    W+     + F+ + +G  G  LY   L G     +++
Sbjct: 364 DLTESKHLYPIDLDRNMGNFKWAEKEDQVYFTAQSNG--GIPLYRFSLRGAKLEKLSS 419


>gi|310765867|gb|ADP10817.1| Uncharacterized protein yidR [Erwinia sp. Ejp617]
          Length = 422

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 51/157 (32%), Gaps = 18/157 (11%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                          +RLT T       +  S   +   SPD S I F   D  G  QL+
Sbjct: 270 GTATTLPAPPAGVKQKRLTYTAQRAYPGLATSPRHWLRSSPDGSAIAFLMKDDAGVVQLW 329

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +   G   +++++          W P G  +AF   +     I +        R + E 
Sbjct: 330 TVSPQGGSPRQVTRCDSDIQSAFSWHPDGRRLAFVCDN----RITLCDVASGALRGIGER 385

Query: 390 SN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           S       A  +SP GR + F R   G        +D
Sbjct: 386 SELPPVADAVVFSPDGRRVAFLRDCVGYRQIFTVLVD 422



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 49/130 (37%), Gaps = 11/130 (8%)

Query: 212 QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +   PR     SP+   +A+   DD  +++++ +  +     +       +  A  +  
Sbjct: 297 GLATSPRHWLRSSPDGSAIAFLMKDDAGVVQLWTVSPQGGSPRQVTRCDSDIQSAFSWHP 356

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREG 324
           +G+R            I   D+ S A   +   +    +  +  +SPD  ++ F  D  G
Sbjct: 357 DGRRLAFVCDN----RITLCDVASGALRGIGERSELPPVADAVVFSPDGRRVAFLRDCVG 412

Query: 325 KEQLYVMQSN 334
             Q++ +  +
Sbjct: 413 YRQIFTVLVD 422



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 3/96 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G + R +T     I     + P+ +++A+   +   +  V     R      
Sbjct: 327 QLWTVSPQGGSPRQVTRCDSDIQSAFSWHPDGRRLAFVCDNRITLCDVASGALRGIGERS 386

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            +     +  A  FS +G+R            I++V
Sbjct: 387 EL---PPVADAVVFSPDGRRVAFLRDCVGYRQIFTV 419


>gi|147677905|ref|YP_001212120.1| periplasmic component of the Tol biopolymer transport system
           [Pelotomaculum thermopropionicum SI]
 gi|146274002|dbj|BAF59751.1| periplasmic component of the Tol biopolymer transport system
           [Pelotomaculum thermopropionicum SI]
          Length = 460

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 58/314 (18%), Positives = 105/314 (33%), Gaps = 55/314 (17%)

Query: 163 YQSITGEKGDFN-SRILF-VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           ++ IT E    + S+ +F VS        K  +  +  DG   + +  S D   F    S
Sbjct: 104 FKKITPENALADVSKEVFEVSYQDGEETKKAKIANLTLDG---KTILASADPECFGLIPS 160

Query: 221 PNQQK-VAY--------------ATYDDEDILRVYLMDTRIDRAPKRIGNFRS-----MI 260
           P+  K + Y              A+   +D       +  ++   K++            
Sbjct: 161 PDHTKGIFYNEKGLWLLQAGKQGASKVSKDKYNGKSYNDLVNELKKKLTGSEGPAIIWWN 220

Query: 261 LAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDS--- 313
             P FS +G + + +  +D        I+  DL S   + L           Y       
Sbjct: 221 DNPIFSPDGSKIVYTTNRDCVESGGSSIWLYDLASGEEQHLIRNTGGE---HYRCKGWLN 277

Query: 314 -SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----- 367
              I+++    G  Q ++    G + + +  D E      V+S   ++IA+T  S     
Sbjct: 278 TKYIIYQKLARGSSQYFIADVEG-NSQELKLDGEKPDILSVYS---EMIAYTNESRNICV 333

Query: 368 ---------GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-GDTGSK 417
                    G    I     +G   + +    +     +SP G  L +    D  +T   
Sbjct: 334 VKVDLENNPGSVNVIYEKPIEGVLRQTMPPAFSATRRNFSPDGSKLAYLYAPDSNETVRH 393

Query: 418 LYSIDLNGRNETLI 431
           L  +DLN + ET +
Sbjct: 394 LVIVDLNTKEETFL 407


>gi|325288172|ref|YP_004263962.1| Dipeptidyl-peptidase IV [Cellulophaga lytica DSM 7489]
 gi|324323626|gb|ADY31091.1| Dipeptidyl-peptidase IV [Cellulophaga lytica DSM 7489]
          Length = 689

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 87/241 (36%), Gaps = 56/241 (23%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRI--------------------------DRAPK 251
            +SP+ +KVA+  +D+++  + Y++  +                           D   K
Sbjct: 166 WWSPDSKKVAFYKFDEKESKKYYVLYNQTQIQDSVEIEAYPKVGAKNLPVDLLVYDLETK 225

Query: 252 RIGNFRSMILAP-------------RFSSNGKRALISV--QKDEAMDIYSVDLQSNATER 296
           +I         P              ++ +GK  L     +K   M++ + +  + A+  
Sbjct: 226 KITELDLRDGKPYNDGDLGTYIYDISWTPDGKELLYHSTNRKQNIMELRAANPNTGASRT 285

Query: 297 LTNTLFINISASY---SP------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +    ++    SY   SP      +  Q ++ S+R G    Y+   +G   K++++    
Sbjct: 286 VIREEWL---PSYTENSPEMHVLDNGKQFIWASERSGFNNYYLYDFSGKLVKQLTKHNFE 342

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                       ++ +T  SGE      +  +K +GS ++ L + S       +P+ +  
Sbjct: 343 VDGIVSIDEAKKVMYYTARSGENHMKIQLHTVKLNGSGDKRLTDPSFHHTVYMAPNHKYF 402

Query: 405 I 405
           +
Sbjct: 403 V 403



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 82/242 (33%), Gaps = 70/242 (28%)

Query: 257 RSMILAPRFSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFI------- 303
           R    A   S NGK    +  ++      +  D+ ++  + N   +L   +         
Sbjct: 100 RGRQYASAESPNGKYKAFTKNRNMFYSNADGSDVVAITTEGNEENQLKFGIATWVYGEEL 159

Query: 304 --NISASYSPDSSQIVFES-DREGKEQLYVMQSNGS------------------------ 336
             N +  +SPDS ++ F   D +  ++ YV+ +                           
Sbjct: 160 SQNTAMWWSPDSKKVAFYKFDEKESKKYYVLYNQTQIQDSVEIEAYPKVGAKNLPVDLLV 219

Query: 337 ---DQKRISQ------------DKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKD 379
              + K+I++            D     +D  W+P G  + +   + ++    +     +
Sbjct: 220 YDLETKKITELDLRDGKPYNDGDLGTYIYDISWTPDGKELLYHSTNRKQNIMELRAANPN 279

Query: 380 GSQERLLVEDSNLQAPTW---SP------SGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
               R ++ +     P++   SP      +G+  I++ ++ G     LY  D +G+    
Sbjct: 280 TGASRTVIRE--EWLPSYTENSPEMHVLDNGKQFIWASERSGFNNYYLY--DFSGKLVKQ 335

Query: 431 IN 432
           + 
Sbjct: 336 LT 337



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 62/163 (38%), Gaps = 18/163 (11%)

Query: 213 ILFEPRFSPNQQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-- 267
            +++  ++P+ +++ Y + + +     LR    +T   R   R     S       S   
Sbjct: 246 YIYDISWTPDGKELLYHSTNRKQNIMELRAANPNTGASRTVIREEWLPSYTEN---SPEM 302

Query: 268 ----NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
               NGK+ + + ++    + Y  D      ++LT   F         ++ ++++ + R 
Sbjct: 303 HVLDNGKQFIWASERSGFNNYYLYDFSGKLVKQLTKHNFEVDGIVSIDEAKKVMYYTARS 362

Query: 324 GKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           G+     QL+ ++ NGS  KR++            +P      
Sbjct: 363 GENHMKIQLHTVKLNGSGDKRLTDPSFH--HTVYMAPNHKYFV 403



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 47/139 (33%), Gaps = 39/139 (28%)

Query: 301 LFINISAS---YSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASY------- 349
             I  S S   ++ + +   F+  ++G  ++  + +   +   ++  D+ A +       
Sbjct: 44  RSIVTSPSYVKWNDEGT--AFQYKKDGETKEFTIGKGETTATTKLKDDRYAKWANRPARG 101

Query: 350 --FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-------------- 393
             +    SP G   AFTK     ++      DGS    +  + N +              
Sbjct: 102 RQYASAESPNGKYKAFTKNRNMFYS----NADGSDVVAITTEGNEENQLKFGIATWVYGE 157

Query: 394 ------APTWSPSGRSLIF 406
                 A  WSP  + + F
Sbjct: 158 ELSQNTAMWWSPDSKKVAF 176


>gi|221235002|ref|YP_002517438.1| acylamino-acid-releasing enzyme [Caulobacter crescentus NA1000]
 gi|220964174|gb|ACL95530.1| acylamino-acid-releasing enzyme [Caulobacter crescentus NA1000]
          Length = 700

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 94/265 (35%), Gaps = 37/265 (13%)

Query: 214 LFEPRFSPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           L +PR SP+ + V Y+         +  + +++ D +   AP+R+        + R+S++
Sbjct: 48  LSDPRVSPDGRHVLYSVRTMDYPANKASMSLWVADLKTKMAPRRLKVSDGGAASGRWSAD 107

Query: 269 GKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-----VFESDR 322
           GK    +  +      ++  D+      ++T T F   +   + D   I     VF    
Sbjct: 108 GKTIYFTSSRAGGTEQVFKTDVTGETATQVTATPFDVQAYKVAADGKTIVVAMAVFPDCP 167

Query: 323 EGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDL---IAFTKFSGE---KFAIGV 375
           +       + + G +    +  D+        WS  G      A+   +        + +
Sbjct: 168 DLACTEARLAAKGATKATGVVFDRLFVRHWDTWS-DGTRNHLFAYGLDASGVVQGHPVAL 226

Query: 376 MKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNGRNET 429
           MK  DG            +  T +P  + + FS K  G      T   ++S  L+G ++ 
Sbjct: 227 MKGFDGDSPTKPF--GGDEDFTITPDNK-VAFSAKVAGKDEAWTTNFDIWSRPLDGSDKL 283

Query: 430 L---------INTPAYASDPQWVGF 445
                        P ++ D +W  +
Sbjct: 284 QNLTAANTAWDTAPVFSPDGKWAAY 308



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 80/245 (32%), Gaps = 26/245 (10%)

Query: 218 RFSPNQQKVAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            +S   +   +A   D   +++ + +                       + +  +   S 
Sbjct: 199 TWSDGTRNHLFAYGLDASGVVQGHPVALMKGFDGDSPTKPFGGDEDFTITPD-NKVAFSA 257

Query: 277 QKDE-------AMDIYSVDLQSN-ATERLTN-TLFINISASYSPDSSQIV--------FE 319
           +            DI+S  L  +   + LT      + +  +SPD             FE
Sbjct: 258 KVAGKDEAWTTNFDIWSRPLDGSDKLQNLTAANTAWDTAPVFSPDGKWAAYRAMKRPGFE 317

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +DR G   + + +     ++ ++   + S     WS  G  I  T     +  +  +   
Sbjct: 318 ADRFG---IMLREVATGQERELAPSWDRSADAIAWSRDGKSIYATALDVGQGKLFAIDVK 374

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA-S 438
             +   L  + ++ A    PSG  ++F+      + S+L+ +   G    + +  + A  
Sbjct: 375 TGKVSALTGEGHVTAFDVGPSG--IVFASD-SLKSPSELFLLPAKGPAVKVASVSSEALK 431

Query: 439 DPQWV 443
           D  W 
Sbjct: 432 DVAWG 436



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/346 (14%), Positives = 110/346 (31%), Gaps = 76/346 (21%)

Query: 165 SITGEKGDFNSRILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            ++  +   + R +  S       +     SL V D             D      R+S 
Sbjct: 47  RLSDPRVSPDGRHVLYSVRTMDYPANKASMSLWVADLKTKMAPRRLKVSDGGAASGRWSA 106

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--- 278
           + + + + +       +V+  D        ++      + A + +++GK  ++++     
Sbjct: 107 DGKTIYFTSSRAGGTEQVFKTDV-TGETATQVTATPFDVQAYKVAADGKTIVVAMAVFPD 165

Query: 279 ------------------------------------DEAMD---IYSVDLQS---NATER 296
                                               D   +    Y +D           
Sbjct: 166 CPDLACTEARLAAKGATKATGVVFDRLFVRHWDTWSDGTRNHLFAYGLDASGVVQGHPVA 225

Query: 297 L---------TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ-------SNGSDQKR 340
           L         T     +   + +PD +++ F +   GK++ +           +GSD+ +
Sbjct: 226 LMKGFDGDSPTKPFGGDEDFTITPD-NKVAFSAKVAGKDEAWTTNFDIWSRPLDGSDKLQ 284

Query: 341 -ISQDKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            ++    A    PV+SP G   A+       F  ++F I + +    QER L    +  A
Sbjct: 285 NLTAANTAWDTAPVFSPDGKWAAYRAMKRPGFEADRFGIMLREVATGQERELAPSWDRSA 344

Query: 395 P--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
               WS  G+S+  +    G    KL++ID+     + +    + +
Sbjct: 345 DAIAWSRDGKSIYATALDVGQG--KLFAIDVKTGKVSALTGEGHVT 388



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 63/165 (38%), Gaps = 15/165 (9%)

Query: 192 SLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRI 246
            +     DG++ ++ LT +       P FSP+ +  AY          D   + L +   
Sbjct: 271 DIWSRPLDGSDKLQNLTAANTAWDTAPVFSPDGKWAAYRAMKRPGFEADRFGIMLREVAT 330

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFI 303
            +  +   ++     A  +S +GK    +        ++++D+++     LT   +    
Sbjct: 331 GQERELAPSWDRSADAIAWSRDGKSIYATALDVGQGKLFAIDVKTGKVSALTGEGHVTAF 390

Query: 304 NISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEA 347
           ++  S       IVF SD      +L+++ + G   K  S   EA
Sbjct: 391 DVGPS------GIVFASDSLKSPSELFLLPAKGPAVKVASVSSEA 429


>gi|254171968|ref|ZP_04878644.1| X-Pro dipeptidyl-peptidase (S15 family) [Thermococcus sp. AM4]
 gi|214033864|gb|EEB74690.1| X-Pro dipeptidyl-peptidase (S15 family) [Thermococcus sp. AM4]
          Length = 654

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 98/312 (31%), Gaps = 59/312 (18%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F  +++F    +          +   DG  +R  T  +      PRFSP+ + +A+ + 
Sbjct: 43  AFRRKVVFQVTEISVEKDDYFSKLYLYDGRRVRPFTSGKK--DSNPRFSPDGRLIAFTSK 100

Query: 232 DDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKD----------- 279
            D++     L     D    + +  F+  I   RF+ +GK   +    D           
Sbjct: 101 RDKEGKEAELYVIPTDGGEARLLAKFKYGIKNLRFTEDGKSIAVITPIDIEKKPKDDVHL 160

Query: 280 ----------------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--D 321
                           +   +Y VD+++    R+T    +++S        ++ F +  D
Sbjct: 161 IKEIPFWFNGVGWVYGKRSVVYLVDVETGKKRRVT-PKNLDVSQVRFHKG-KLYFIAQED 218

Query: 322 REGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----AIGVM 376
           RE K  +  +    G   KR++  K  S  D +    G  I               I   
Sbjct: 219 RERKPMVSDLYLLEGRKAKRLTPGK-WSVSDFIPLDDGTFILKANTRERGIPTNTHIYHY 277

Query: 377 KKDGSQERLLVE---------------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +  + R L                  S      +   G  + +         + L+ +
Sbjct: 278 NPETGEMRKLTAELDRSAYNSLNSDVRGSQRAELVFR-DG-WVYYVATDGPR--ANLFRV 333

Query: 422 DLNGRNETLINT 433
           +L G  E +I  
Sbjct: 334 NLGGEIERVIGG 345



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 79/205 (38%), Gaps = 49/205 (23%)

Query: 274 ISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKE-QLY 329
           ISV+KD+    +Y  D         T+    + +  +SPD   I F S R+  GKE +LY
Sbjct: 55  ISVEKDDYFSKLYLYD--GRRVRPFTSGKK-DSNPRFSPDGRLIAFTSKRDKEGKEAELY 111

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------------------------ 365
           V+ ++G + + +++ K     +  ++  G  IA                           
Sbjct: 112 VIPTDGGEARLLAKFKYG-IKNLRFTEDGKSIAVITPIDIEKKPKDDVHLIKEIPFWFNG 170

Query: 366 ---FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDT---GSKL 418
                G++  + ++  +  ++R +  ++ ++    +      L F  ++D +     S L
Sbjct: 171 VGWVYGKRSVVYLVDVETGKKRRVTPKNLDVSQVRFHK--GKLYFIAQEDRERKPMVSDL 228

Query: 419 YSIDLNGRNETLINTPAYASDPQWV 443
           Y   L GR    + TP      +W 
Sbjct: 229 YL--LEGRKAKRL-TPG-----KWS 245


>gi|269124685|ref|YP_003298055.1| serine/threonine protein kinase with WD40 repeats [Thermomonospora
           curvata DSM 43183]
 gi|268309643|gb|ACY96017.1| serine/threonine protein kinase with WD40 repeats [Thermomonospora
           curvata DSM 43183]
          Length = 740

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 98/253 (38%), Gaps = 26/253 (10%)

Query: 199 DG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           DG + +R+     ++ +    FSP+   +A A++D        L + +  +    +   R
Sbjct: 403 DGDSPLRFTLKGHEKWVESVAFSPDGATLATASWDG----TARLWNAKNGKPVATLEGHR 458

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSS 314
             +++  FS +G     +   D    ++  + ++     +T   +   I  S  +SPD +
Sbjct: 459 GEVISVAFSPDGATLA-TGSGDGTARLW--NAKNGELI-ITLKGHQKAI-GSVVFSPDGA 513

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S       + +  +  S+     +  +       +SP G L+A T  S +   + 
Sbjct: 514 TLATAS---WDNTVRLWNARSSELITALKGHKEVVQSVAFSPDGALLA-TASSDDTARLW 569

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY------SIDLNGRNE 428
            ++       L    S + +  +SP G +L  + +   D  ++L+       I +   ++
Sbjct: 570 RVRSGELITALKGHRSTVASVVFSPDGATLATASR---DGTARLWRAKDGELITVLKGHQ 626

Query: 429 TLINTPAYASDPQ 441
             + + A++ D  
Sbjct: 627 DQVTSVAFSPDGA 639



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 90/242 (37%), Gaps = 20/242 (8%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ +    N++ + +   + +        +++    FSP+   +A A+ DD       L 
Sbjct: 514 TLATASWDNTVRLWNARSSELITALKGHKEVVQSVAFSPDGALLATASSDD----TARLW 569

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             R       +   RS + +  FS +G     +  +D    ++           L     
Sbjct: 570 RVRSGELITALKGHRSTVASVVFSPDGATLA-TASRDGTARLWRA-KDGELITVLKGHQD 627

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++SPD + +   +  +G  +L+ ++ +G     ++   E   +   +SP G L+A
Sbjct: 628 QVTSVAFSPDGAALA-TAGWDGTARLWRVK-DGEFIAILANHPE--VWSVAFSPDGALLA 683

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                G    I  +    + E +         + +  +SP G  L  + +   D  +KL+
Sbjct: 684 TANNKG----IARLWNARNGELITTLEGHHGGIGSVAFSPDGALLATASR---DGTAKLW 736

Query: 420 SI 421
            +
Sbjct: 737 RV 738


>gi|289661557|ref|ZP_06483138.1| putative dipeptidyl peptidase [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 711

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 10/114 (8%)

Query: 260 ILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYS 310
           + +P  S +G   L       +     A  ++  +L++      +RLT   +   S + S
Sbjct: 36  VSSPTLSPDGSVVLFAKRQAKTANGKPATSLWLRNLRTRDLSPPKRLTPEGWNVNSPALS 95

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           PD   + F S + G +QLY     G   ++++            SP G  IAF+
Sbjct: 96  PDGKTVYFLSSKTGSQQLYAQPMAGGTPQQLT-AFAVDVDSYKLSPDGKRIAFS 148



 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 84/274 (30%), Gaps = 51/274 (18%)

Query: 214 LFEPRFSPNQQKVAYA-----TYDDEDILRVYLMDTRID--RAPKRIGNFRSMILAPRFS 266
           +  P  SP+   V +A     T + +    ++L + R      PKR+      + +P  S
Sbjct: 36  VSSPTLSPDGSVVLFAKRQAKTANGKPATSLWLRNLRTRDLSPPKRLTPEGWNVNSPALS 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y+  +     ++LT       S   SPD  +I F +   G  
Sbjct: 96  PDGKTVYFLSSKTGSQQLYAQPMAGGTPQQLTAFAVDVDSYKLSPDGKRIAFSA---GVF 152

Query: 327 QLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           Q                       +  D+        W+       F        A  V+
Sbjct: 153 QDCGSDLGCTKKKLGELKNKKASGVVYDQLFVRHWDTWNDGRRNTLFVAELPAAGARAVV 212

Query: 377 KKDGSQERLLVED-----SNLQAPTWSPSGRSLIFS-----------------------R 408
                   L  +            TWSP G S++ S                        
Sbjct: 213 GASAISATLAGDAPSKPFGGNDDYTWSPDGASVVASVRIPQSHGPEAGKNAKTGAKPTGN 272

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +   T   LY +D +G++  +  T   A++P W
Sbjct: 273 DEPWQTNFDLYRLDASGKSAPVNLT---AANPAW 303



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 100/331 (30%), Gaps = 66/331 (19%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R      S  ++Q    + G    ++  +     SG++ + L V   D  N
Sbjct: 135 SYKLSPDGKRIA---FSAGVFQDCGSDLGCTKKKLGELKNKKASGVVYDQLFVRHWDTWN 191

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSM 259
                              + ++      +        ++         A          
Sbjct: 192 -------------------DGRRNTLFVAELPAAGARAVVGASAISATLAGDAPSKPFGG 232

Query: 260 ILAPRFSSNGKRALISVQKDE-------------------------AMDIYSVDLQSNA- 293
                +S +G   + SV+  +                           D+Y +D    + 
Sbjct: 233 NDDYTWSPDGASVVASVRIPQSHGPEAGKNAKTGAKPTGNDEPWQTNFDLYRLDASGKSA 292

Query: 294 TERLTN-TLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQD 344
              LT      +    +S D   +         FE+DR G   L  M       + I+  
Sbjct: 293 PVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFG---LMAMDVASGKTREIAPK 349

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S  + V S  G  +  +     +  +  +     +   LV + ++ APT +  G +L
Sbjct: 350 WDRSAGEIVLSDDGSSLYTSADDLGEHPLFKIDIASGEATKLVGEGSVHAPTLA--GNTL 407

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            F+R     +G +++  D  G+    I+  A
Sbjct: 408 AFTRS-SLKSGDQIFVSDTQGQGLRAISQSA 437



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 93/308 (30%), Gaps = 61/308 (19%)

Query: 183 SVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +G    SL + +   RD +  + LTP    +   P  SP+ + V + +       + 
Sbjct: 56  KTANGKPATSLWLRNLRTRDLSPPKRLTPEGWNVN-SPALSPDGKTVYFLSSKTGS--QQ 112

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATER- 296
                     P+++  F   + + + S +GKR   S  V +D   D+     +    +  
Sbjct: 113 LYAQPMAGGTPQQLTAFAVDVDSYKLSPDGKRIAFSAGVFQDCGSDLGCTKKKLGELKNK 172

Query: 297 -----LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----- 346
                + + LF+    +++      +F ++             G+     +   +     
Sbjct: 173 KASGVVYDQLFVRHWDTWNDGRRNTLFVAE---LPAAGARAVVGASAISATLAGDAPSKP 229

Query: 347 -ASYFDPVWSPQGDLIAFTKFSG-------------------------EKFAIGVMKKDG 380
                D  WSP G  +  +                               F +  +   G
Sbjct: 230 FGGNDDYTWSPDGASVVASVRIPQSHGPEAGKNAKTGAKPTGNDEPWQTNFDLYRLDASG 289

Query: 381 -SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTP 434
            S    L     +    P +S  G++L +   K     +    L ++D+       I   
Sbjct: 290 KSAPVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVASGKTREIA-- 347

Query: 435 AYASDPQW 442
                P+W
Sbjct: 348 -----PKW 350


>gi|20091617|ref|NP_617692.1| hypothetical protein MA2794 [Methanosarcina acetivorans C2A]
 gi|19916782|gb|AAM06172.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
           C2A]
          Length = 630

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 71/183 (38%), Gaps = 22/183 (12%)

Query: 269 GKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPD--SSQIVFESDREG 324
           G R +    +  D + D+Y  D  +   +R+T +   +     SP     +IV+E  R  
Sbjct: 79  GDRIVWGNYRIVDSSEDLYLYDTNNFTNDRITASGSAS-----SPKIYGDKIVWEDSRSK 133

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGE----KFAIGVMKK 378
              +Y+   +   + +I+ +K         SP   G+ + +             I +   
Sbjct: 134 DSDIYIYNLSTQSETQITTNKSDQK-----SPDIYGNRVVWEDDRNGGDLINSDIYMYDL 188

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             ++E  +    + + P     G  + +   ++G+  S +Y  DL+ +NET I T   A 
Sbjct: 189 STNKESRITTIISAKDPVI--YGDRIAWQDTRNGEWKSDIYLYDLSTKNETQITTSGSAY 246

Query: 439 DPQ 441
            P 
Sbjct: 247 SPA 249



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 102/277 (36%), Gaps = 36/277 (12%)

Query: 170 KGDFNSRILFVSESVVSGIIKNS--LCVMDRDGANIRYLTPSRDQILFEPRFSPN--QQK 225
            G  +S  ++  + V          + + +    +   +T ++         SP+    +
Sbjct: 112 SGSASSPKIYGDKIVWEDSRSKDSDIYIYNLSTQSETQITTNKSDQK-----SPDIYGNR 166

Query: 226 VAYATYDDEDIL---RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           V +    +   L    +Y+ D   ++   RI    S      +   G R      ++   
Sbjct: 167 VVWEDDRNGGDLINSDIYMYDLSTNKES-RITTIISAKDPVIY---GDRIAWQDTRNGEW 222

Query: 283 --DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             DIY  DL +    ++T +     S +   D  ++V+  + E    +Y+   + S + +
Sbjct: 223 KSDIYLYDLSTKNETQITTSGSA-YSPAIYED--RLVWRDNSENHSGIYMHNLSTSTETQ 279

Query: 341 ISQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           I         +  +SP   GD I +   S     I +     + E  +      ++  +S
Sbjct: 280 I------IANESAYSPVIYGDNIVWKDNSENHSGIYMHNLSTATETQITAS---ESLIYS 330

Query: 399 P--SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           P   G ++++   ++    S++Y  +++   E LINT
Sbjct: 331 PAIYGDNIVWVDDRNNR--SEIYMYNISTSKEILINT 365


>gi|289577536|ref|YP_003476163.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Thermoanaerobacter italicus Ab9]
 gi|289527249|gb|ADD01601.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Thermoanaerobacter italicus Ab9]
          Length = 667

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 77/217 (35%), Gaps = 40/217 (18%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            E  L  Y  +       ++  N    +     S +GK+ L S+        Y  DL ++
Sbjct: 116 PEKGLFEYNKNGFRQIVGEKSKNVPIGVGDVAVSPDGKKLLYSL----NYQYYIKDLSTD 171

Query: 293 ATERLT-NTLFINI---SASYSPDSSQIVFESD----REG------KEQLYVMQSNGSDQ 338
            TE++      ++I   S  +SPD ++I+F  +    REG      K  L+      S  
Sbjct: 172 KTEKIRVTGNGLDIFYESPFFSPDGNKIIFTKNVYTPREGGHGFEKKATLWEYDLKTSQL 231

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             I++    SY         + I F K +     I        +E+ + E      P+ S
Sbjct: 232 TEIAEGSYGSYVKNQ-----NAIVFEKDN----KIIYKDLKTGEEKTVDEGR---FPSVS 279

Query: 399 PSGRSLIFS------RKKDG----DTGSKLYSIDLNG 425
           P G  + +          DG    +  S ++  D  G
Sbjct: 280 PDGNYIAYVKSEIKNSTIDGVEVTEHISNVWVTDAVG 316



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 13/108 (12%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL---QAPTWS 398
           S++      D   SP G  + ++     ++ I  +  D +++  +  +      ++P +S
Sbjct: 136 SKNVPIGVGDVAVSPDGKKLLYSL--NYQYYIKDLSTDKTEKIRVTGNGLDIFYESPFFS 193

Query: 399 PSGRSLIFSRK----KDGDTGSK----LYSIDLNGRNETLINTPAYAS 438
           P G  +IF++     ++G  G +    L+  DL     T I   +Y S
Sbjct: 194 PDGNKIIFTKNVYTPREGGHGFEKKATLWEYDLKTSQLTEIAEGSYGS 241



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 80/250 (32%), Gaps = 52/250 (20%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYAT---------YDDEDILRVYLMDTRIDRAPKRI 253
           IR      D     P FSP+  K+ +           +  E    ++  D +  +  +  
Sbjct: 176 IRVTGNGLDIFYESPFFSPDGNKIIFTKNVYTPREGGHGFEKKATLWEYDLKTSQLTEIA 235

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                  +         +  I  +KD    I   DL++   + +    F     S SPD 
Sbjct: 236 EGSYGSYV-------KNQNAIVFEKD--NKIIYKDLKTGEEKTVDEGRF----PSVSPDG 282

Query: 314 SQIVFE------SDREGKE------QLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDL 360
           + I +       S  +G E       ++V  + G + +K++++    ++  P       L
Sbjct: 283 NYIAYVKSEIKNSTIDGVEVTEHISNVWVTDAVGFATKKQVTE----NFSKPNL---KSL 335

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK--- 417
           +   K   +   I      G +            P+WS    S+   +  + D       
Sbjct: 336 VESVKEKNKNSPIKSDLVTGGE-------YGYYLPSWSNDSNSIYVLKNLNEDVRGNMMT 388

Query: 418 LYSIDLNGRN 427
           L  IDL+   
Sbjct: 389 LMKIDLSKEK 398


>gi|19113822|ref|NP_592910.1| transcriptional corepressor Tup12 [Schizosaccharomyces pombe 972h-]
 gi|15214326|sp|Q9UUG8|TUP12_SCHPO RecName: Full=Transcriptional repressor tup12
 gi|5734475|emb|CAB52736.1| transcriptional corepressor Tup12 [Schizosaccharomyces pombe]
          Length = 586

 Score = 73.9 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 24/210 (11%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              D  +    FSP+ + +A    D     ++ + D    R  + +      I +  FS 
Sbjct: 331 REGDLYVRSVAFSPDGKYLATGVEDQ----QIRIWDIAQKRVYRLLTGHEQEIYSLDFSK 386

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +GK  +          +   D+++   + + +T     +  +SPD   I   S     + 
Sbjct: 387 DGKTLV---SGSGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDGQFIAAGSL---DKV 440

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG----------VMK 377
           + +  S+G+  +++    E S +   +SP G  +           +            M 
Sbjct: 441 IRIWTSSGTLVEQL-HGHEESVYSVAFSPDGKYLVSGSLDNT-IKLWELQCVSNVAPSMY 498

Query: 378 KDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
           K+G   +           + T SP G+ +I
Sbjct: 499 KEGGICKQTFTGHKDFILSVTVSPDGKWII 528



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 76/201 (37%), Gaps = 17/201 (8%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVY---LMDTRIDRAPKRIGNFRSMILAPRFS 266
              ++   RFS + + +A        +  V    L+    + + KR G+    + +  FS
Sbjct: 286 HTSVICYVRFSADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDL--YVRSVAFS 343

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
            +GK    +  +D+ + I+  D+      R LT       S  +S D   +V  S   G 
Sbjct: 344 PDGKYLA-TGVEDQQIRIW--DIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGS---GD 397

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +      +QK I    +      ++SP G  IA          I +    G+    
Sbjct: 398 RTVCLWDVEAGEQKLILHTDDG-VTTVMFSPDGQFIAAGSLDK---VIRIWTSSGTLVEQ 453

Query: 386 LV-EDSNLQAPTWSPSGRSLI 405
           L   + ++ +  +SP G+ L+
Sbjct: 454 LHGHEESVYSVAFSPDGKYLV 474



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 84/227 (37%), Gaps = 24/227 (10%)

Query: 145 FSSPASWRKIAHTISDDIYQSIT-GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
                   +I       +Y+ +T  E+  ++       +++VSG    ++C+ D +    
Sbjct: 351 TGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWDVEAGEQ 410

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +  + D +     FSP+ Q +A  + D   ++R++   T      +++      + + 
Sbjct: 411 KLILHTDDGVTTV-MFSPDGQFIAAGSLD--KVIRIW---TSSGTLVEQLHGHEESVYSV 464

Query: 264 RFSSNGKRALISVQKDEAMDIY----------SVDLQSNATER-LTNTLFINISASYSPD 312
            FS +GK  + S   D  + ++          S+  +    ++  T      +S + SPD
Sbjct: 465 AFSPDGKYLV-SGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPD 523

Query: 313 SSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              I+  S DR     +     +    +   Q    S      SP G
Sbjct: 524 GKWIISGSKDRT----IQFWSPDSPHSQLTLQGHNNSVISVAVSPNG 566


>gi|240102986|ref|YP_002959295.1| Peptidase, prolyl oligopeptidase family [Thermococcus gammatolerans
           EJ3]
 gi|239910540|gb|ACS33431.1| Peptidase, prolyl oligopeptidase family [Thermococcus gammatolerans
           EJ3]
          Length = 662

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 98/314 (31%), Gaps = 55/314 (17%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F  R++F    +          +   DG  ++  T  +      PRFSP+ + +A+ + 
Sbjct: 51  AFGRRLVFQVTEISVEKDDYFSKLYLYDGRKVKPFTSGKK--DGNPRFSPDGKLIAFTSK 108

Query: 232 DDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISV-------------- 276
            D++     L     D    + +  F+  I   RF+ +GK   +                
Sbjct: 109 RDKESKEAELYVIPTDGGEARLLTKFKYGIKNLRFTEDGKSVAVVTPVKVEKKPKDDVHV 168

Query: 277 ------QKDEAMDIY-------SVDLQSNATERLTNTLFINISASYSPDSS-QIVFESDR 322
                   +    +Y        VD++S    R+T    +++S     +     V + DR
Sbjct: 169 IREIPFWFNGVGWVYGKRSVVHLVDVESGKKRRVT-PKSLDVSQVRFHNGRLYFVAQEDR 227

Query: 323 EGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----AIGVMK 377
           E K  +  +    G   ++++  K  S  D +    G  I               I    
Sbjct: 228 EKKPMVSDLYILEGRKARKLTPGK-WSVSDFIPLDDGTFILKANTRERGIPTNTHIYHYN 286

Query: 378 KDGSQERLLVED--------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +  + R L                  + +A      G  + +         + L+ ++L
Sbjct: 287 PETGELRKLTAGLDRSAYNSLNSDVRGSQRAELVFKDG-WVYYVATDGPR--ANLFRVNL 343

Query: 424 NGRNETLINTPAYA 437
            G+ E ++      
Sbjct: 344 EGKIERVVGGNRSV 357



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 91/250 (36%), Gaps = 55/250 (22%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEAM-DIYS 286
            E    + ++        K IG F+ +     F   G+R +      SV+KD+    +Y 
Sbjct: 20  YEKSRFILVVSMAKGLGIKDIGKFKLVGNIDAF---GRRLVFQVTEISVEKDDYFSKLYL 76

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE---QLYVMQSNGSDQKRISQ 343
            D      +  T+    + +  +SPD   I F S R+ +    +LYV+ ++G + + +++
Sbjct: 77  YD--GRKVKPFTSGKK-DGNPRFSPDGKLIAFTSKRDKESKEAELYVIPTDGGEARLLTK 133

Query: 344 DKEASYFDPVWSPQGDLIAFTK---------------------------FSGEKFAIGVM 376
            K     +  ++  G  +A                                G++  + ++
Sbjct: 134 FKYG-IKNLRFTEDGKSVAVVTPVKVEKKPKDDVHVIREIPFWFNGVGWVYGKRSVVHLV 192

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKLYSIDLNGRNETLINT 433
             +  ++R +   S   +     +GR L F  ++D       S LY   L GR    + T
Sbjct: 193 DVESGKKRRVTPKSLDVSQVRFHNGR-LYFVAQEDREKKPMVSDLYI--LEGRKARKL-T 248

Query: 434 PAYASDPQWV 443
           P      +W 
Sbjct: 249 PG-----KWS 253


>gi|67923652|ref|ZP_00517121.1| similar to Periplasmic component of the Tol biopolymer transport
           system [Crocosphaera watsonii WH 8501]
 gi|67854493|gb|EAM49783.1| similar to Periplasmic component of the Tol biopolymer transport
           system [Crocosphaera watsonii WH 8501]
          Length = 152

 Score = 73.9 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 3/130 (2%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSP 311
           N +S    P +S +G+    + ++    DIY  DLQ      L N    + S      S 
Sbjct: 22  NTKSPEEYPTYSGDGRYLAFASERQGHRDIYLFDLQQKRLVSLPNLNRRDSSQDQPGLSF 81

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   +V+ S   GK  + V          ++ +   S   P  +  G  +AF      ++
Sbjct: 82  DGRYLVYVSTERGKPDVMVYDRRVQRSTLLTANVRGSVRQPTITGDGSQVAFQTSQLGEW 141

Query: 372 AIGVMKKDGS 381
            I ++    S
Sbjct: 142 NIAIVDYQTS 151



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 10/130 (7%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDPV 353
           NT       +YS D   + F S+R+G   +Y+       QKR+        +++S   P 
Sbjct: 22  NTKSPEEYPTYSGDGRYLAFASERQGHRDIYLFDL---QQKRLVSLPNLNRRDSSQDQPG 78

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKD 411
            S  G  + +      K  + V  +   +  LL  +   +++ PT +  G  + F   + 
Sbjct: 79  LSFDGRYLVYVSTERGKPDVMVYDRRVQRSTLLTANVRGSVRQPTITGDGSQVAFQTSQL 138

Query: 412 GDTGSKLYSI 421
           G+    +   
Sbjct: 139 GEWNIAIVDY 148



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 49/125 (39%), Gaps = 4/125 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRAL 273
            P +S + + +A+A+        +YL D +  R      +    S    P  S +G+  +
Sbjct: 29  YPTYSGDGRYLAFASERQGH-RDIYLFDLQQKRLVSLPNLNRRDSSQDQPGLSFDGRYLV 87

Query: 274 ISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               +    D+   D +   +  LT N        + + D SQ+ F++ + G+  + ++ 
Sbjct: 88  YVSTERGKPDVMVYDRRVQRSTLLTANVRGSVRQPTITGDGSQVAFQTSQLGEWNIAIVD 147

Query: 333 SNGSD 337
              S 
Sbjct: 148 YQTSP 152



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 34/86 (39%), Gaps = 1/86 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
              RD    +P  S + + + Y + +      V + D R+ R+     N R  +  P  +
Sbjct: 67  LNRRDSSQDQPGLSFDGRYLVYVSTERGKP-DVMVYDRRVQRSTLLTANVRGSVRQPTIT 125

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSN 292
            +G +      +    +I  VD Q++
Sbjct: 126 GDGSQVAFQTSQLGEWNIAIVDYQTS 151



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 28/94 (29%), Gaps = 4/94 (4%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFS 407
           P +S  G  +AF         I +      +   L      DS+   P  S  GR L++ 
Sbjct: 30  PTYSGDGRYLAFASERQGHRDIYLFDLQQKRLVSLPNLNRRDSSQDQPGLSFDGRYLVYV 89

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             + G     +Y   +        N       P 
Sbjct: 90  STERGKPDVMVYDRRVQRSTLLTANVRGSVRQPT 123



 Score = 37.7 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 4/49 (8%)

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           L   S  + PT+S  GR L F+ ++ G     +Y  DL  + + L++ P
Sbjct: 21  LNTKSPEEYPTYSGDGRYLAFASERQGHR--DIYLFDL--QQKRLVSLP 65


>gi|124005883|ref|ZP_01690721.1| dipeptidyl peptidase IV (DPP IV) N-terminal region domain protein
           [Microscilla marina ATCC 23134]
 gi|123988566|gb|EAY28207.1| dipeptidyl peptidase IV (DPP IV) N-terminal region domain protein
           [Microscilla marina ATCC 23134]
          Length = 708

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 72/202 (35%), Gaps = 33/202 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +  N +      Y      +V   D    +A   +    S+       S+   + L++ 
Sbjct: 31  NWMKNGR-----YYTTRQGNKVVKFDINTRKAVATLFEGESLRFDAYGLSAREDKLLLAT 85

Query: 277 Q------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           Q      +      Y  D+ +   ++LTN     + AS+SPD S++ F  D      L+V
Sbjct: 86  QTEAIYRRSSKSYYYVYDISTKKLDKLTNQPGKQLHASFSPDGSKVAFVRD----NNLFV 141

Query: 331 MQSNGSDQKRISQDKEASYF-----------------DPVWSPQGDLIAFTKFSGEKFAI 373
           +      + +I+ D + ++                     WSP    IAF KF   K   
Sbjct: 142 VDLATKKETQITNDGQWNHIINGNADWVYEEEFSFSKAFFWSPDSKRIAFYKFDESKVKE 201

Query: 374 GVMKKDGSQERLLVEDSNLQAP 395
             M++ G Q++    D   + P
Sbjct: 202 YNMQRWGGQKQPYAIDYRFKYP 223



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 32/104 (30%), Gaps = 24/104 (23%)

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R  K   YV   +     +++ ++        +SP G  +AF + +     + V+     
Sbjct: 93  RSSKSYYYVYDISTKKLDKLT-NQPGKQLHASFSPDGSKVAFVRDN----NLFVVDLATK 147

Query: 382 QERLLVEDSNLQA-------------------PTWSPSGRSLIF 406
           +E  +  D                          WSP  + + F
Sbjct: 148 KETQITNDGQWNHIINGNADWVYEEEFSFSKAFFWSPDSKRIAF 191



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 23/143 (16%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKF 366
           ++  +     + + R+G  ++     N         + E+  FD    S + D +     
Sbjct: 31  NWMKNGR---YYTTRQGN-KVVKFDINTRKAVATLFEGESLRFDAYGLSAREDKLLLATQ 86

Query: 367 SGEKFA------IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +   +         V      +   L          ++SP G  + F R       + L+
Sbjct: 87  TEAIYRRSSKSYYYVYDISTKKLDKLTNQPGKQLHASFSPDGSKVAFVRD------NNLF 140

Query: 420 SIDLNGRNETLINTPAYASDPQW 442
            +DL  + ET I       D QW
Sbjct: 141 VVDLATKKETQITN-----DGQW 158



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/423 (13%), Positives = 123/423 (29%), Gaps = 99/423 (23%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWN--SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           ++   + ++K+   + + +F+ +     G   +  GR     +    V+F   D+  RK 
Sbjct: 1   MLDVQAQQKKVVTVEDVWQFKFFARGVRGVNWMKNGRYYTTRQGNKVVKF---DINTRKA 57

Query: 139 IIGKKFFSSPASWRKIAHTIS---DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           +          S R  A+ +S   D +  +   E     S   +     +S    + L  
Sbjct: 58  V---ATLFEGESLRFDAYGLSAREDKLLLATQTEAIYRRSSKSYYYVYDISTKKLDKL-- 112

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA---------------TYDDEDILRVY 240
                        ++        FSP+  KVA+                T    D    +
Sbjct: 113 ------------TNQPGKQLHASFSPDGSKVAFVRDNNLFVVDLATKKETQITNDGQWNH 160

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +++   D   +   +F        +S + KR       +  +  Y++       +     
Sbjct: 161 IINGNADWVYEEEFSFSKAFF---WSPDSKRIAFYKFDESKVKEYNMQRWGGQKQP---- 213

Query: 301 LFINISASYSPDS------SQIVFES--------DREGKEQLYV---------------- 330
             I+    Y            +V+          D   ++ +Y+                
Sbjct: 214 YAIDYRFKYPKAGEDNSTIQILVYNVATAKSMKMDIGAEQDMYIPRLRWTQNPELLSIRR 273

Query: 331 ------------MQSNGSDQKRISQDKEASYFDPVWSPQ------GDLIAFTKFSGEKFA 372
                         ++    + I  ++  +Y D  ++        G     T        
Sbjct: 274 LNRLQNKLELLHANASTGKTQVILTEESKTYVDVDFTDDLTYLKNGKEFIHTSERDGYKH 333

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSP-SGRS--LIFSRKKDGDTGSKLYSIDLNGRNET 429
           + + K +G   R + +  N +    +    +   L F+  +       LY ID+ GR + 
Sbjct: 334 VYLYKLNGKLVRQITK-GNWEVRNLAGIDEKRKLLYFTSTEVSPLERHLYRIDMKGRKKV 392

Query: 430 LIN 432
            + 
Sbjct: 393 RMT 395



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 90/298 (30%), Gaps = 51/298 (17%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF-----NSRILFVS 181
              + D+  +K+       ++   W  I +  +D +Y+        F     + RI F  
Sbjct: 138 NLFVVDLATKKE----TQITNDGQWNHIINGNADWVYEEEFSFSKAFFWSPDSKRIAFYK 193

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV---AY-------ATY 231
                        +    G    Y    R      P+   +   +    Y          
Sbjct: 194 FDESK---VKEYNMQRWGGQKQPYAIDYR---FKYPKAGEDNSTIQILVYNVATAKSMKM 247

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D      +Y+   R  + P+ +   R                   +    +++   +  +
Sbjct: 248 DIGAEQDMYIPRLRWTQNPELLSIRRLN-----------------RLQNKLELLHANAST 290

Query: 292 NATER-LTNTLFINISASYSPD------SSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             T+  LT      +   ++ D        + +  S+R+G + +Y+ + NG   ++I++ 
Sbjct: 291 GKTQVILTEESKTYVDVDFTDDLTYLKNGKEFIHTSERDGYKHVYLYKLNGKLVRQITKG 350

Query: 345 KEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                       +  L+ FT    S  +  +  +   G ++  + +D       +S  
Sbjct: 351 NWEVRNLAGIDEKRKLLYFTSTEVSPLERHLYRIDMKGRKKVRMTKDKGTHRINFSSD 408


>gi|147677104|ref|YP_001211319.1| hypothetical protein PTH_0769 [Pelotomaculum thermopropionicum SI]
 gi|146273201|dbj|BAF58950.1| hypothetical membrane protein [Pelotomaculum thermopropionicum SI]
          Length = 479

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 75/217 (34%), Gaps = 34/217 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ Q +A +         +YL      R P  +G  R     P ++ +G R ++   
Sbjct: 258 AWSPDGQTLACSLSGPGGENEIYL--LAKGREPVSLGAGR----HPAWAPDGSRLVVERI 311

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS---------SQIVFESDREGKEQL 328
                    +        RLT         ++SP           ++ V     +G   L
Sbjct: 312 GGSGQPELWLTGPGGGEARLTEGE----RPAWSPRGYLAFIRVKTTERVLTYSPDGSP-L 366

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGD-------LIAFTKFSGEKFAIGVMKKDGS 381
           + +Q    + + I+  ++         P G        L+A     G +    + + +  
Sbjct: 367 FTVQQRQGEIRAINAGRKGDLLLKQ--PDGRMLLGDRLLLAPDTRPGGEELNWLRRLESE 424

Query: 382 QER-----LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             R     LL   SN Q   +SP G++L+ +R+  G 
Sbjct: 425 GVREPRALLLEPLSNFQDINFSPDGKTLLVARRDGGT 461



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 59/177 (33%), Gaps = 30/177 (16%)

Query: 289 LQSNATERLTNTLFINISASYS--PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           L++  T  ++     +    ++  P      F + R G   L+++   G+    +     
Sbjct: 134 LEAGPTREISRFWLEDTPLDFACVPGGRG--FLAVRGGS--LHLLDQYGNQTGTVKPPGG 189

Query: 347 ASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMK--KDGSQERLLVEDSNLQAP------ 395
            SY  P  S  GD +A  +     GE+    VM           LVE +  +A       
Sbjct: 190 QSYASPALSGAGDKLALVRRHEAGGEEIITAVMPSVPLEPGAAQLVETALARAEVLLKVE 249

Query: 396 --------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                    WSP G++L  S    G    ++Y +   GR    +        P W  
Sbjct: 250 QGKSLSGLAWSPDGQTLACSLSGPGGEN-EIYLL-AKGREPVSL---GAGRHPAWAP 301


>gi|326799163|ref|YP_004316982.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphingobacterium sp. 21]
 gi|326549927|gb|ADZ78312.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphingobacterium sp. 21]
          Length = 676

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 93/251 (37%), Gaps = 28/251 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y+  S +   ++  F+     V YA+Y +  I     +D   D                 
Sbjct: 160 YIFNSLNNRHWDTWFNGKFSHVFYASYQNGIIGE--PVDIMADEPYFTPQQPFGGAEDMV 217

Query: 265 FSSNGKRALIS--------VQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQ 315
           +S + K+ +            +    D+Y+ D++   T+ L++ +   +++ ++S D++ 
Sbjct: 218 WSPDSKQIIYVCKKKFGTDYAQSTNTDLYAYDIERKQTKNLSDGMMGYDVAPAFSKDANY 277

Query: 316 IVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           + + S         K  L V     S    +++D + +    +WS  G  I FT  +   
Sbjct: 278 LAWLSMKEDGYESDKNDLIVRDLKTSTTYNLTKDWDETVGGFLWSADGSKIWFTAPTAGT 337

Query: 371 FAIG-------VMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSI 421
             +        + K    Q + L +         S +G S  L+   + D +  ++LY+ 
Sbjct: 338 IQLFEIALSKDLSKVGAKQVKQLTKGDYDIT---SVNGESGDLLLVSRTDMNHAAELYTF 394

Query: 422 DLNGRNETLIN 432
           +   +    ++
Sbjct: 395 NRKSKELKQLS 405



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 74/204 (36%), Gaps = 31/204 (15%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             + A   + + K A+  V      + +   ++Y + L      +LT +           
Sbjct: 31  GRVSAEAVTPDKKYAVYGVTHYNLAENNSERNLYKIPLNGGKALQLTKSQGGETLVHLEQ 90

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------ 365
           + + I++ S    K QL++++S   + K++++  +    +   SP G  I F++      
Sbjct: 91  NGN-ILYLS----KGQLWLLESGKEEPKQLTK-FDGELSNVKISPNGQYILFSQEVALQK 144

Query: 366 -FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR--SLIFSRKKDGDTGSKLYSID 422
             S +K+         S   +    +N    TW  +G+   + ++  ++G  G     +D
Sbjct: 145 VQSADKYE----DLKKSDAYIFNSLNNRHWDTWF-NGKFSHVFYASYQNGIIGE---PVD 196

Query: 423 LNGRNETLINTP--AYASDPQWVG 444
           +               A D  W  
Sbjct: 197 IMADEPYFTPQQPFGGAEDMVWSP 220



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 62/226 (27%), Gaps = 62/226 (27%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALIS--------VQKDEAMDIYSVD------LQSNATE 295
           PK++  F   +   + S NG+  L S           D+  D+   D      L +   +
Sbjct: 112 PKQLTKFDGELSNVKISPNGQYILFSQEVALQKVQSADKYEDLKKSDAYIFNSLNNRHWD 171

Query: 296 RLTNTL-----------FINISA----------------------SYSPDSSQIVFE--- 319
              N              I                           +SPDS QI++    
Sbjct: 172 TWFNGKFSHVFYASYQNGIIGEPVDIMADEPYFTPQQPFGGAEDMVWSPDSKQIIYVCKK 231

Query: 320 -----SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-- 372
                  +     LY         K +S         P +S   + +A+     + +   
Sbjct: 232 KFGTDYAQSTNTDLYAYDIERKQTKNLSDGMMGYDVAPAFSKDANYLAWLSMKEDGYESD 291

Query: 373 ---IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGD 413
              + V     S    L +D +  +    WS  G  + F+    G 
Sbjct: 292 KNDLIVRDLKTSTTYNLTKDWDETVGGFLWSADGSKIWFTAPTAGT 337


>gi|312200565|ref|YP_004020626.1| hypothetical protein FraEuI1c_6787 [Frankia sp. EuI1c]
 gi|311231901|gb|ADP84756.1| WD40 repeat, subgroup [Frankia sp. EuI1c]
          Length = 787

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 88/295 (29%), Gaps = 28/295 (9%)

Query: 140 IGKKFFSSPASWR--------KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
            G       A  R        + AH +   +  ++TG   D  S        +++   K+
Sbjct: 466 AGNGSAGGNADLRGGSMERSARPAHHVDVSLRATLTGHDRDVTSCAFSPDGRLLATTSKD 525

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            + + D     +        +    P    FSP+ + +A    D        L D     
Sbjct: 526 GIQLWDVATGRVEGELSGPGRKGSVPNSCAFSPDGKLLAITGSDK----STRLFDMATRA 581

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                   +  +    FS +G     +   D  + ++ V                    +
Sbjct: 582 ETTVFSGHKGPVYGVAFSPDGTLIA-TTSTDRTVKLWGVSTGKQIATLSGEHRGSVYGCA 640

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +V      G + + +      +                +SP G ++A T   G
Sbjct: 641 FSPDGRLLV----SAGADSILLWDVAIGESIMKVPGHTNFANGCAFSPDGLVLATTANDG 696

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +    V         + +  S  Q+  +SP G+ L  +   D    ++L+ +  
Sbjct: 697 TR----VTDVPTGTTTMTLGGS-AQSCAFSPDGQLLATASTDD---VARLWDVST 743



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 93/310 (30%), Gaps = 46/310 (14%)

Query: 119 EGKDRLRVE-----FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
               RL         +LWDV   +            S         D    +ITG   D 
Sbjct: 513 SPDGRLLATTSKDGIQLWDVATGRVEGELSGPGRKGSVPNSCAFSPDGKLLAITG--SDK 570

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++R+  ++    +                   +       ++   FSP+   +A  + D 
Sbjct: 571 STRLFDMATRAET------------------TVFSGHKGPVYGVAFSPDGTLIATTSTDR 612

Query: 234 EDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ-S 291
                V L      +    + G  R  +    FS +G+  + +     A  I   D+   
Sbjct: 613 ----TVKLWGVSTGKQIATLSGEHRGSVYGCAFSPDGRLLVSA----GADSILLWDVAIG 664

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            +  ++          ++SPD   +   +     +   V                 S   
Sbjct: 665 ESIMKVPGHTNFANGCAFSPDGLVLATTA----NDGTRVTDVPTGTTT---MTLGGSAQS 717

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             +SP G L+A T  + +   +  +        L    S + +  ++P G  L  +    
Sbjct: 718 CAFSPDGQLLA-TASTDDVARLWDVSTGVEVATLSGHSSTVMSCAFAPYGLLLATTST-- 774

Query: 412 GDTGSKLYSI 421
            DT ++L+ I
Sbjct: 775 -DTTARLWEI 783


>gi|255012487|ref|ZP_05284613.1| hypothetical protein B2_01163 [Bacteroides sp. 2_1_7]
          Length = 503

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 92/317 (29%), Gaps = 56/317 (17%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E G     I+ + +  +    +  +   D  G N          +        +  ++ +
Sbjct: 156 EPGYEKWHIVGIYQRNLESFDEQPIIRNDMTGYNC---------MNCHSFCMGDPGQMMF 206

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---------- 278
                     +           K  G   +M   P +  +G+    SV            
Sbjct: 207 HMRAANGGTYIVQDKKISKLNTKTNGTISNMTY-PFWHPSGRYITTSVNDIKQFFHSVKE 265

Query: 279 ------DEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFES--------- 320
                 D   D+   D+++        L          ++SPD   + F +         
Sbjct: 266 KKMEVFDLESDVVVYDVKNKEILSKASLITKDAFETFPAFSPDGKWLYFCTAPAQKMPEN 325

Query: 321 -DREGKEQLYV-MQSNGSDQK----RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            D+       V    +  +       +      SY  P  SP G  + +T+ +  +F I 
Sbjct: 326 YDKVRYNLCRVAFDPDRGEISFPIDTLVHADSLSYTFPRISPDGRFLMYTETAYGQFPIW 385

Query: 375 VMKKDGSQE----RLLVEDSNLQAP------TWSPSGRSLIFSRKKDGD--TGSKLYSID 422
               +        R  ++ S L +P      +WS +   ++FS ++D    T   +  I 
Sbjct: 386 HPDAEIRMMDLENRTAMDMSALNSPDTDSYHSWSSNSDWVVFSSRRDNGLYTLPYICHIG 445

Query: 423 LNGRNETLINTPAYASD 439
            +G+       P    D
Sbjct: 446 KDGKPSKPFLLPQEDPD 462


>gi|282879876|ref|ZP_06288603.1| peptidase, S9A/B/C familie, catalytic domain protein [Prevotella
           timonensis CRIS 5C-B1]
 gi|281306270|gb|EFA98303.1| peptidase, S9A/B/C familie, catalytic domain protein [Prevotella
           timonensis CRIS 5C-B1]
          Length = 725

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 71/242 (29%), Gaps = 63/242 (26%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S +G + +  V        +    ++  D++ +   +LT        A +  
Sbjct: 52  GRIGGASSSPDGNQVVYQVGYYSVKNNNSQQMLFVTDVKGSHKTQLTTGSKSETDAVWIQ 111

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------ 365
              +I F +      QL+ M  +GS++K+++           +SP    +   K      
Sbjct: 112 QGKKIAFLT----GGQLWTMNPDGSNRKKLTNST-VDIEGFKFSPDEKKVILIKSLPYHG 166

Query: 366 -------------------FSGEKFAIGVMKKDGSQERLLVEDSNLQ------------- 393
                               +   +   V          + E    +             
Sbjct: 167 TIKANPADLPLATGRLATDMNYRHWDHYVESIAHPFVANVTESGVDEGKDILQDEPFECP 226

Query: 394 -AP-------TWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTPAYASD 439
            AP        WSP  + + ++ RKK+G      T + +Y  D+       +  P    +
Sbjct: 227 TAPFGGVEQLAWSPDSKQIAYTCRKKEGVQYAISTDTDIYLYDITTGKTRNLCKPEGYQE 286

Query: 440 PQ 441
           P 
Sbjct: 287 PA 288



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 84/284 (29%), Gaps = 85/284 (29%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------------------------ 227
            L  M+ DG+N + LT S   I    +FSP+++KV                         
Sbjct: 123 QLWTMNPDGSNRKKLTNSTVDIEGF-KFSPDEKKVILIKSLPYHGTIKANPADLPLATGR 181

Query: 228 ------YATYDDE-----DILRVYLMDTRIDRAPKRIGNFR--------SMILAPRFSSN 268
                 Y  +D             + ++ +D     + +            +    +S +
Sbjct: 182 LATDMNYRHWDHYVESIAHPFVANVTESGVDEGKDILQDEPFECPTAPFGGVEQLAWSPD 241

Query: 269 GKRALISVQKDEA--------MDIYSVDLQSNATERL-------------TNTL------ 301
            K+   + +K E          DIY  D+ +  T  L             T ++      
Sbjct: 242 SKQIAYTCRKKEGVQYAISTDTDIYLYDITTGKTRNLCKPEGYQEPAIDATKSMKNQAVN 301

Query: 302 --------FINISASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEAS 348
                     + + S+S D   I ++S         + +L +       ++ +++  +++
Sbjct: 302 HQQGDMNVGYDTNPSFSADGKYIAWQSMKQNGYESDRNRLCIYDLKKGVKQYVTESFDSN 361

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                W      + F      K  +      G Q + L +    
Sbjct: 362 VDAYCWGNDNTTLYFIGVWHGKTHVYQTNLKG-QVKQLTDGQYD 404



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 15/107 (14%), Positives = 35/107 (32%), Gaps = 5/107 (4%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSM 259
                        P FS + + +A+ +        D  R+ + D +         +F S 
Sbjct: 302 HQQGDMNVGYDTNPSFSADGKYIAWQSMKQNGYESDRNRLCIYDLKKGVKQYVTESFDSN 361

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           + A  + ++               +Y  +L+    ++LT+  +   S
Sbjct: 362 VDAYCWGNDNTTLYFIGVWHGKTHVYQTNLK-GQVKQLTDGQYDYGS 407


>gi|269925664|ref|YP_003322287.1| WD-40 repeat protein [Thermobaculum terrenum ATCC BAA-798]
 gi|269789324|gb|ACZ41465.1| WD-40 repeat protein [Thermobaculum terrenum ATCC BAA-798]
          Length = 477

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 81/249 (32%), Gaps = 36/249 (14%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR- 264
           +    +  +    +SP+ + +A ++                    K +   R    AP  
Sbjct: 107 VLVGHNGPVTVLAWSPDAKILASSSGVVTRNETFDPTVRLWSAKGKLLTTLRGHT-APVT 165

Query: 265 ---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES- 320
              +S +G+    S  +D  + ++  D      + L        S ++SPD   +   S 
Sbjct: 166 SLEWSPDGQLLA-SGSRDGTVRLW--DAHGKQIKSLRLDEEQVYSLAWSPDGQILAVGSI 222

Query: 321 --DREGKEQLY----VMQSNGSDQK----RISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             ++ G   L     V++  G D +     I+      +    WS  G  +A        
Sbjct: 223 QQEQAGSTGLIQFKGVVRLFGVDGRLLKMLITDGGGGKWLHVEWSSDGSTLA-----AGA 277

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +   + ++DG   +L+     L AP     WSP G  L       G+    +   D  GR
Sbjct: 278 WGFRLWQRDG---KLVGTIGRLGAPATVMIWSPDGSMLA-----TGNEDGLVSLYDHRGR 329

Query: 427 NETLINTPA 435
               +    
Sbjct: 330 VAAQLPGNG 338



 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 53/316 (16%), Positives = 113/316 (35%), Gaps = 40/316 (12%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ--SITGEKGDFNSRI 177
                    RLWD    KQI  K           +A +    I    SI  E+      I
Sbjct: 177 ASGSRDGTVRLWD-AHGKQI--KSLRLDEEQVYSLAWSPDGQILAVGSIQQEQAGSTGLI 233

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            F     + G+    L ++  DG   ++L            +S +   +A   +      
Sbjct: 234 QFKGVVRLFGVDGRLLKMLITDGGGGKWLHVE---------WSSDGSTLAAGAWG----F 280

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R++  D ++     R+G   ++++   +S +G     +  +D  + +Y  D +     +L
Sbjct: 281 RLWQRDGKLVGTIGRLGAPATVMI---WSPDGSMLA-TGNEDGLVSLY--DHRGRVAAQL 334

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ----DKEASYFDPV 353
                  +S ++SPD  ++   S      +++ ++   ++ + + +      E S  + V
Sbjct: 335 P-GNGPIVSLAFSPDGGKLALMS--GNYVRMFDLRDPHAEPRTLYRYLGPLAEWSASNIV 391

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKK 410
           WSP G  +A          + V + +G   R++         +   WSP G+ +      
Sbjct: 392 WSPDGVWLA---GRTPDSVLRVWRANGR--RVVTLPGCNNEASVLAWSPDGKVIAAGGSH 446

Query: 411 DGDTGSKLY-SIDLNG 425
                  ++ ++ + G
Sbjct: 447 GDTICLWIWPTMSIAG 462



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 70/219 (31%), Gaps = 36/219 (16%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + P  +      +    +S + K        ++  +     +     +      L     
Sbjct: 103 KRPIVLVGHNGPVTVLAWSPDAKILASSSGVVTRNETFDPTVRLWSAKGKLLTTLRGHTA 162

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S  +SPD   +   S R+G  +L+   ++G   K +  D+E  Y    WSP G ++A
Sbjct: 163 PVTSLEWSPDGQLLASGS-RDGTVRLW--DAHGKQIKSLRLDEEQVYSL-AWSPDGQILA 218

Query: 363 FTKFSGEKF----------AIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRK 409
                 E+            + +   DG   ++L+ D          WS  G +L     
Sbjct: 219 VGSIQQEQAGSTGLIQFKGVVRLFGVDGRLLKMLITDGGGGKWLHVEWSSDGSTLA---- 274

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQ----WVG 444
             G  G +L+  D       L+ T      P     W  
Sbjct: 275 -AGAWGFRLWQRDG-----KLVGTIGRLGAPATVMIWSP 307



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 71/216 (32%), Gaps = 26/216 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    +SP+ Q +A  + D      V L D    +  K +      + +  
Sbjct: 155 TTLRGHTAPVTSLEWSPDGQLLASGSRDG----TVRLWDAH-GKQIKSLRLDEEQVYSLA 209

Query: 265 FSSNGKRALI-SVQKDEAMDIYSVD---------LQSNATERL-TNTLFINISA-SYSPD 312
           +S +G+   + S+Q+++A     +          +     + L T+          +S D
Sbjct: 210 WSPDGQILAVGSIQQEQAGSTGLIQFKGVVRLFGVDGRLLKMLITDGGGGKWLHVEWSSD 269

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            S +       G     + Q +G     I +   A     +WSP G ++A     G    
Sbjct: 270 GSTLA-----AGAWGFRLWQRDGKLVGTIGRLG-APATVMIWSPDGSMLATGNEDG---L 320

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           + +    G     L  +  + +  +SP G  L    
Sbjct: 321 VSLYDHRGRVAAQLPGNGPIVSLAFSPDGGKLALMS 356


>gi|16126229|ref|NP_420793.1| prolyl oligopeptidase family protein [Caulobacter crescentus CB15]
 gi|13423453|gb|AAK23961.1| prolyl oligopeptidase family protein [Caulobacter crescentus CB15]
          Length = 683

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 94/265 (35%), Gaps = 37/265 (13%)

Query: 214 LFEPRFSPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           L +PR SP+ + V Y+         +  + +++ D +   AP+R+        + R+S++
Sbjct: 31  LSDPRVSPDGRHVLYSVRTMDYPANKASMSLWVADLKTKMAPRRLKVSDGGAASGRWSAD 90

Query: 269 GKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-----VFESDR 322
           GK    +  +      ++  D+      ++T T F   +   + D   I     VF    
Sbjct: 91  GKTIYFTSSRAGGTEQVFKTDVTGETATQVTATPFDVQAYKVAADGKTIVVAMAVFPDCP 150

Query: 323 EGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDL---IAFTKFSGE---KFAIGV 375
           +       + + G +    +  D+        WS  G      A+   +        + +
Sbjct: 151 DLACTEARLAAKGATKATGVVFDRLFVRHWDTWS-DGTRNHLFAYGLDASGVVQGHPVAL 209

Query: 376 MKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNGRNET 429
           MK  DG            +  T +P  + + FS K  G      T   ++S  L+G ++ 
Sbjct: 210 MKGFDGDSPTKPF--GGDEDFTITPDNK-VAFSAKVAGKDEAWTTNFDIWSRPLDGSDKL 266

Query: 430 L---------INTPAYASDPQWVGF 445
                        P ++ D +W  +
Sbjct: 267 QNLTAANTAWDTAPVFSPDGKWAAY 291



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 80/245 (32%), Gaps = 26/245 (10%)

Query: 218 RFSPNQQKVAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            +S   +   +A   D   +++ + +                       + +  +   S 
Sbjct: 182 TWSDGTRNHLFAYGLDASGVVQGHPVALMKGFDGDSPTKPFGGDEDFTITPD-NKVAFSA 240

Query: 277 QKDE-------AMDIYSVDLQSN-ATERLTN-TLFINISASYSPDSSQIV--------FE 319
           +            DI+S  L  +   + LT      + +  +SPD             FE
Sbjct: 241 KVAGKDEAWTTNFDIWSRPLDGSDKLQNLTAANTAWDTAPVFSPDGKWAAYRAMKRPGFE 300

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +DR G   + + +     ++ ++   + S     WS  G  I  T     +  +  +   
Sbjct: 301 ADRFG---IMLREVATGQERELAPSWDRSADAIAWSRDGKSIYATALDVGQGKLFAIDVK 357

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA-S 438
             +   L  + ++ A    PSG  ++F+      + S+L+ +   G    + +  + A  
Sbjct: 358 TGKVSALTGEGHVTAFDVGPSG--IVFASD-SLKSPSELFLLPAKGPAVKVASVSSEALK 414

Query: 439 DPQWV 443
           D  W 
Sbjct: 415 DVAWG 419



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 51/346 (14%), Positives = 110/346 (31%), Gaps = 76/346 (21%)

Query: 165 SITGEKGDFNSRILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            ++  +   + R +  S       +     SL V D             D      R+S 
Sbjct: 30  RLSDPRVSPDGRHVLYSVRTMDYPANKASMSLWVADLKTKMAPRRLKVSDGGAASGRWSA 89

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--- 278
           + + + + +       +V+  D        ++      + A + +++GK  ++++     
Sbjct: 90  DGKTIYFTSSRAGGTEQVFKTDV-TGETATQVTATPFDVQAYKVAADGKTIVVAMAVFPD 148

Query: 279 ------------------------------------DEAMD---IYSVDLQS---NATER 296
                                               D   +    Y +D           
Sbjct: 149 CPDLACTEARLAAKGATKATGVVFDRLFVRHWDTWSDGTRNHLFAYGLDASGVVQGHPVA 208

Query: 297 L---------TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ-------SNGSDQKR 340
           L         T     +   + +PD +++ F +   GK++ +           +GSD+ +
Sbjct: 209 LMKGFDGDSPTKPFGGDEDFTITPD-NKVAFSAKVAGKDEAWTTNFDIWSRPLDGSDKLQ 267

Query: 341 -ISQDKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            ++    A    PV+SP G   A+       F  ++F I + +    QER L    +  A
Sbjct: 268 NLTAANTAWDTAPVFSPDGKWAAYRAMKRPGFEADRFGIMLREVATGQERELAPSWDRSA 327

Query: 395 P--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
               WS  G+S+  +    G    KL++ID+     + +    + +
Sbjct: 328 DAIAWSRDGKSIYATALDVGQG--KLFAIDVKTGKVSALTGEGHVT 371



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 63/165 (38%), Gaps = 15/165 (9%)

Query: 192 SLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRI 246
            +     DG++ ++ LT +       P FSP+ +  AY          D   + L +   
Sbjct: 254 DIWSRPLDGSDKLQNLTAANTAWDTAPVFSPDGKWAAYRAMKRPGFEADRFGIMLREVAT 313

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFI 303
            +  +   ++     A  +S +GK    +        ++++D+++     LT   +    
Sbjct: 314 GQERELAPSWDRSADAIAWSRDGKSIYATALDVGQGKLFAIDVKTGKVSALTGEGHVTAF 373

Query: 304 NISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEA 347
           ++  S       IVF SD      +L+++ + G   K  S   EA
Sbjct: 374 DVGPS------GIVFASDSLKSPSELFLLPAKGPAVKVASVSSEA 412


>gi|331694750|ref|YP_004330989.1| peptidase S41 [Pseudonocardia dioxanivorans CB1190]
 gi|326949439|gb|AEA23136.1| peptidase S41 [Pseudonocardia dioxanivorans CB1190]
          Length = 1122

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 59/187 (31%), Gaps = 22/187 (11%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   + + + D    +++  L      RLT           SPD +++ + S REG +++
Sbjct: 13  GDTLVFTAEDD----VWTAPLAGGRAYRLTADDVPVSRPRLSPDGTRVAWTSTREGAQEV 68

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDGSQER 384
           +V   +G   +R++    A       S     +     +GE  A       +   G   R
Sbjct: 69  FVTDLDGGGARRLTWFGGARTVGWRGSGADAEVVVLSAAGEASARRTWAYAIPAAGGAPR 128

Query: 385 LLVEDSNLQAPTWSPSGR------------SLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            L         T +  GR               + R + G  G   +  +  G    L  
Sbjct: 129 RLDYGPVSDVATAA--GRPAVLLGTTMSREMAWWKRYRGGTAGKLWWDPEGTGEFRRLAA 186

Query: 433 TPAYASD 439
                 D
Sbjct: 187 ELGGQID 193



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 90/286 (31%), Gaps = 50/286 (17%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +      G     LT   D  +  PR SP+  +VA+ +   E    V++ D     A +
Sbjct: 23  DVWTAPLAGGRAYRLTAD-DVPVSRPRLSPDGTRVAWTSTR-EGAQEVFVTDLDGGGA-R 79

Query: 252 RIGNFRSMILAPRFSSNGKRA-LISVQKDE-----AMDIYSVDLQSNATERLTNTLFINI 305
           R+  F        +  +G  A ++ +             Y++     A  RL      ++
Sbjct: 80  RLTWFGG-ARTVGWRGSGADAEVVVLSAAGEASARRTWAYAIPAAGGAPRRLDYGPVSDV 138

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-------- 357
           +   +      V       +E  +  +  G    ++  D E +      + +        
Sbjct: 139 A---TAAGRPAVLLGTTMSREMAWWKRYRGGTAGKLWWDPEGTGEFRRLAAELGGQIDSP 195

Query: 358 ---GDLIAFTKFSGEKFAIGVMKKDGSQ-------ERLL--VEDSNLQAPTW-----SPS 400
              GD IAF         +  +  D +        E LL   +     AP +     S  
Sbjct: 196 MLVGDRIAFLSDHEGWGNVYSLPLDRNGAGADDSLEGLLRHTDHGADGAPAFYARHASTD 255

Query: 401 GRSLIFSRKKDGDTGSKLYSID---LNGRNETL---INTPAYASDP 440
           G  +++      ++  +LY +D    +     L   +  P    +P
Sbjct: 256 GTRVVY------ESAGELYLLDDLTADSAPRRLDIALGGPRTDREP 295



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/181 (12%), Positives = 51/181 (28%), Gaps = 24/181 (13%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGII---KNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
              +T   G   + +                 +L + D +G +   + P   +    P  
Sbjct: 324 VHRLTHRDGPARTLLAQPGVRARLAQPLGDDRALWIDDAEGEDAVVVAPLDPRADGAPAL 383

Query: 220 ----------------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                           +P+    A AT+D     R+ ++D       +        +   
Sbjct: 384 VRHAAGRVGRVLELAAAPDGSTAAIATHDG----RLLVLDIGSGELRELARGADGEVSGV 439

Query: 264 RFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            +S +      +   +     I    L  +    +T   F++    ++ D   + F S R
Sbjct: 440 AYSPDSAWLTYADPVETGLSRIMIARLADDTLVEVTPPRFVDRHPVFTADGKYLAFLSLR 499

Query: 323 E 323
            
Sbjct: 500 T 500



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 47/139 (33%), Gaps = 8/139 (5%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSG 368
           +PD S     +  +G  +L V+     + + +++  +       +SP    + +      
Sbjct: 400 APDGSTAA-IATHDG--RLLVLDIGSGELRELARGADGEVSGVAYSPDSAWLTYADPVET 456

Query: 369 EKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GR 426
               I + +  D +   +       + P ++  G+ L F   +  D     +S DL    
Sbjct: 457 GLSRIMIARLADDTLVEVTPPRFVDRHPVFTADGKYLAFLSLRTFDPIYDEHSFDLTFPA 516

Query: 427 NETLINTPAYASDPQWVGF 445
           +      P  A  P    F
Sbjct: 517 SWRPFLVPLAARTP--SPF 533



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 7/86 (8%)

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           GD + FT        +      G +  RL  +D  +  P  SP G  + ++  ++G    
Sbjct: 13  GDTLVFTAEDD----VWTAPLAGGRAYRLTADDVPVSRPRLSPDGTRVAWTSTREG--AQ 66

Query: 417 KLYSIDLNGRNETLINTPAYASDPQW 442
           +++  DL+G     +     A    W
Sbjct: 67  EVFVTDLDGGGARRLTWFGGARTVGW 92


>gi|170095359|ref|XP_001878900.1| mycorrhiza-induced NACHT/WD-repeat protein [Laccaria bicolor
            S238N-H82]
 gi|164646204|gb|EDR10450.1| mycorrhiza-induced NACHT/WD-repeat protein [Laccaria bicolor
            S238N-H82]
          Length = 1537

 Score = 73.5 bits (179), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 103/310 (33%), Gaps = 25/310 (8%)

Query: 140  IGKKFFSSPASWRKIAHTISDDI-YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
            I +++ S         H  + D+    I      F+      S  +VSG    S+ V D 
Sbjct: 807  ISQQWRSQFCGIPSFIHRKASDLPLIRIQTAAPIFSVAFSTDSTRIVSGSKDKSVRVWDA 866

Query: 199  DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI--------LRVYLMDTRIDRAP 250
                   +     + +    FS +  ++   +  D               + D       
Sbjct: 867  STGAELKVLNGHMKAVNSVAFSTDGTRIVSGSVWDASTGAELKVLNGHKMVWDASTGAEL 926

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASY 309
            K +      + +  FS++G R + S   D+++ ++  D+ + A  ++ N     + S ++
Sbjct: 927  KVLNGHMKAVNSVAFSTDGTRIV-SGSYDKSVRVW--DVSTGAELKVLNGHMEAVKSVAF 983

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            S D + IV  S     + + V  ++   + ++    +       +S  G  I        
Sbjct: 984  STDGTCIVSGSS---DKSVQVWDASTGAELKVLNGHKYGVNSVAFSTDGTHIVSGSSDKS 1040

Query: 370  KFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               + V       E  ++      + +  +S  G  ++       D   +++ +   G  
Sbjct: 1041 ---VRVWDASTGAELKVLNGHMKAVNSVAFSTDGTRIVSGSY---DKSVRVWDVS-TGAE 1093

Query: 428  ETLINTPAYA 437
              ++N    A
Sbjct: 1094 LKVLNGHMEA 1103



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 91/268 (33%), Gaps = 25/268 (9%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-------ED 235
             ++SG    S+ V D        +     + +    FS +  ++   +YD          
Sbjct: 1199 RIISGSYDKSVRVWDVSTGAELKVLNGHMKAVNSVAFSTDGTRIVSGSYDKSVRVWDAST 1258

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-AT 294
               + + D       K +      + +  FS++G R + S   D+++ ++  D+ +    
Sbjct: 1259 GAELKVWDASTGAELKVLNGHMEAVCSVAFSTDGTRIV-SGSYDKSVRVW--DVSTGAEL 1315

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            + L   +    S ++S D + IV  S     + + V  ++   + ++    +       +
Sbjct: 1316 KVLNGHMHRVKSVAFSTDGTCIVSGSS---DKSVQVWDASTGAELKVLNGHKYGVNSVAF 1372

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDG 412
            S  G  I           + V       E  ++      + +  +S  G  ++      G
Sbjct: 1373 STDGTHIVSGSSDKS---VRVWDASTGAELKVLNGHMKAVNSVAFSTDGTRIV-----SG 1424

Query: 413  DTGSKLYSID-LNGRNETLINTPAYASD 439
               S +   D L G    + N   ++ +
Sbjct: 1425 SADSSVRVWDALTGAEARVPNIHTHSHN 1452



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/350 (13%), Positives = 108/350 (30%), Gaps = 50/350 (14%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHT---------ISDDIYQ--- 164
             +          R+WDV    ++  K       + + +A +          SD   Q   
Sbjct: 1072 TRIVSGSYDKSVRVWDVSTGAEL--KVLNGHMEAVKSVAFSTDGTCIVSGSSDKSVQVWD 1129

Query: 165  -------SITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
                    +        + + F ++    VSG    S+ V D        +     + + 
Sbjct: 1130 ASTGAELKVLNGHKYGVNSVAFSTDGTHIVSGSSDKSVRVWDASTGAELKVLNGHMKAVN 1189

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               FS +  ++   +YD      V + D       K +      + +  FS++G R + S
Sbjct: 1190 SVAFSTDGTRIISGSYDK----SVRVWDVSTGAELKVLNGHMKAVNSVAFSTDGTRIV-S 1244

Query: 276  VQKDEAMDIYSV---------DLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGK 325
               D+++ ++           D  +    + L   +    S ++S D ++IV  S     
Sbjct: 1245 GSYDKSVRVWDASTGAELKVWDASTGAELKVLNGHMEAVCSVAFSTDGTRIVSGSY---D 1301

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            + + V   +   + ++            +S  G  I           + V       E  
Sbjct: 1302 KSVRVWDVSTGAELKVLNGHMHRVKSVAFSTDGTCIVSGSSDKS---VQVWDASTGAELK 1358

Query: 386  LVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            ++      + +  +S  G  ++       D   +++     G    ++N 
Sbjct: 1359 VLNGHKYGVNSVAFSTDGTHIV---SGSSDKSVRVWDAS-TGAELKVLNG 1404



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 89/267 (33%), Gaps = 27/267 (10%)

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                    R+WDV    ++  K       +   +A   S D         G ++  +   
Sbjct: 1202 SGSYDKSVRVWDVSTGAEL--KVLNGHMKAVNSVA--FSTD---GTRIVSGSYDKSV--- 1251

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
               V        L V D        +     + +    FS +  ++   +YD      V 
Sbjct: 1252 --RVWDASTGAELKVWDASTGAELKVLNGHMEAVCSVAFSTDGTRIVSGSYDK----SVR 1305

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + D       K +      + +  FS++G   ++S   D+++ ++  D  + A  ++ N 
Sbjct: 1306 VWDVSTGAELKVLNGHMHRVKSVAFSTDGT-CIVSGSSDKSVQVW--DASTGAELKVLNG 1362

Query: 301  LFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                + S ++S D + IV  S     + + V  ++   + ++      +     +S  G 
Sbjct: 1363 HKYGVNSVAFSTDGTHIVSGSS---DKSVRVWDASTGAELKVLNGHMKAVNSVAFSTDGT 1419

Query: 360  LIAFTKFSGEKFAIGVMK-KDGSQERL 385
             I           + V     G++ R+
Sbjct: 1420 RIVSGSADSS---VRVWDALTGAEARV 1443


>gi|294665457|ref|ZP_06730742.1| alanyl dipeptidyl peptidase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292604756|gb|EFF48122.1| alanyl dipeptidyl peptidase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 706

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 82/274 (29%), Gaps = 51/274 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  +P+   V +A    +         L V  + TR    PKR+      + +P  S
Sbjct: 36  VSSPTLTPDGSSVLFAKRQAKTANGKPATSLWVRNLRTRDLSPPKRLTPEGWNVNSPALS 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y+  +     ++LT       S   SPD  +I F +   G  
Sbjct: 96  PDGKTVYFLSSKSGSQQLYAQPMAGGTPQQLTAFAVDVDSYKLSPDGKRIAFSA---GVF 152

Query: 327 QLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           Q                  +    +  D+        W+       F        A  V+
Sbjct: 153 QDCGSDLGCTKKKLGELKNNKASGVVYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVV 212

Query: 377 KKDGSQERLLVED-----SNLQAPTWSPSGRSLIFS-----------------------R 408
                   L  +            TWSP G S++ S                        
Sbjct: 213 GASAISATLAGDAPSKPFGGNDDYTWSPDGSSVVASVRIPQPHGPEAGKNAKAGGKPTGN 272

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +   T   LY +D  G++  +  T   A++P W
Sbjct: 273 DESWQTNFDLYRLDATGKSAPVNLT---AANPAW 303



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 50/332 (15%), Positives = 101/332 (30%), Gaps = 66/332 (19%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R      S  ++Q    + G    ++  +  +  SG++ + L V   D  N
Sbjct: 135 SYKLSPDGKRIA---FSAGVFQDCGSDLGCTKKKLGELKNNKASGVVYDQLFVRHWDTWN 191

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSM 259
                              + ++      +        ++         A          
Sbjct: 192 -------------------DGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGG 232

Query: 260 ILAPRFSSNGKRALISVQKDE-------------------------AMDIYSVDLQSNA- 293
                +S +G   + SV+  +                           D+Y +D    + 
Sbjct: 233 NDDYTWSPDGSSVVASVRIPQPHGPEAGKNAKAGGKPTGNDESWQTNFDLYRLDATGKSA 292

Query: 294 TERLTN-TLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQD 344
              LT      +    +S D   +         FE+DR G   L  M       + I+  
Sbjct: 293 PVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFG---LMAMDVASGKTREIAPK 349

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S  + V S  G  +  +     +  +  +     +   LV + ++ APT +  G +L
Sbjct: 350 WDRSAGEIVPSADGSTLYTSADDLGEHPLFKIDIASGEATKLVGEGSVHAPTLA--GNTL 407

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            F+R     +G +++  D  G+    I+  A 
Sbjct: 408 AFTRS-SLKSGDQVFVSDAQGQGLRAISQSAG 438



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 88/312 (28%), Gaps = 69/312 (22%)

Query: 183 SVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +G    SL V +   RD +  + LTP    +   P  SP+ + V + +   +   + 
Sbjct: 56  KTANGKPATSLWVRNLRTRDLSPPKRLTPEGWNVN-SPALSPDGKTVYFLS--SKSGSQQ 112

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                     P+++  F   + + + S +GKR   S            DL     ++L  
Sbjct: 113 LYAQPMAGGTPQQLTAFAVDVDSYKLSPDGKRIAFSA---GVFQDCGSDL-GCTKKKLGE 168

Query: 300 TLFINISA------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE- 346
                 S             +++      +F ++             G+     +   + 
Sbjct: 169 LKNNKASGVVYDQLFVRHWDTWNDGRRNTLFVAE---LPAAGAKAVVGASAISATLAGDA 225

Query: 347 -----ASYFDPVWSPQGDLIAFTKFSG-------------------------EKFAIGVM 376
                    D  WSP G  +  +                               F +  +
Sbjct: 226 PSKPFGGNDDYTWSPDGSSVVASVRIPQPHGPEAGKNAKAGGKPTGNDESWQTNFDLYRL 285

Query: 377 KKDG-SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETL 430
              G S    L     +    P +S  G++L +   K     +    L ++D+       
Sbjct: 286 DATGKSAPVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVASGKTRE 345

Query: 431 INTPAYASDPQW 442
           I        P+W
Sbjct: 346 IA-------PKW 350



 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 85/284 (29%), Gaps = 43/284 (15%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKV 226
            E G         + +  S      L  +D  G +    LT +       P FS + + +
Sbjct: 257 PEAGKNAKAGGKPTGNDESWQTNFDLYRLDATGKSAPVNLTAANPAWDAGPVFSTDGKTL 316

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF---------SSNGKRALISVQ 277
            Y                R       + + ++  +AP++         S++G     S  
Sbjct: 317 YYRAMKRPGF-----EADRFGLMAMDVASGKTREIAPKWDRSAGEIVPSADGSTLYTSAD 371

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASY----------SPDSSQIVFESDREGKEQ 327
                 ++ +D+ S    +L     ++   +           S  S   VF SD +G+  
Sbjct: 372 DLGEHPLFKIDIASGEATKLVGEGSVHA-PTLAGNTLAFTRSSLKSGDQVFVSDAQGQGL 430

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIA--FTKFSGEKFAIGVMKKDGSQE 383
             + QS G     +       +    W+       +   +    G+ + +  +   G Q 
Sbjct: 431 RAISQSAGELLPEVQFGDYEQFQFKGWNNDTVHGYVVKPYNYQEGKTYPVAFLIHGGPQG 490

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                  N  +  W+P        +   G  G  +  ID +G  
Sbjct: 491 ----SFGNGWSNRWNP--------QTYAGQ-GYAVVMIDSHGST 521


>gi|294625882|ref|ZP_06704496.1| alanyl dipeptidyl peptidase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292599792|gb|EFF43915.1| alanyl dipeptidyl peptidase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 706

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 49/274 (17%), Positives = 82/274 (29%), Gaps = 51/274 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  +P+   V +A    +         L V  + TR    PKR+      + +P  S
Sbjct: 36  VSSPTLTPDGSSVLFAKRQAKTANGKPATSLWVRNLRTRDLSPPKRLTPEGWNVNSPALS 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y+  +     ++LT       S   SPD  +I F +   G  
Sbjct: 96  PDGKTVYFLSSKSGSQQLYAQPMAGGTPQQLTAFAVDVDSYKLSPDGKRIAFSA---GVF 152

Query: 327 QLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           Q                  +    +  D+        W+       F        A  V+
Sbjct: 153 QDCGSDLGCTKKKLGELKNNKASGVVYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVV 212

Query: 377 KKDGSQERLLVED-----SNLQAPTWSPSGRSLIFS-----------------------R 408
                   L  +            TWSP G S++ S                        
Sbjct: 213 GASAISATLAGDAPSKPFGGNDDYTWSPDGSSVVASVRIPQPHGPEAGKNAKAGGKPTGN 272

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +   T   LY +D  G++  +  T   A++P W
Sbjct: 273 DESWQTNFDLYRLDATGKSAPVNLT---AANPAW 303



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 50/332 (15%), Positives = 101/332 (30%), Gaps = 66/332 (19%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R      S  ++Q    + G    ++  +  +  SG++ + L V   D  N
Sbjct: 135 SYKLSPDGKRIA---FSAGVFQDCGSDLGCTKKKLGELKNNKASGVVYDQLFVRHWDTWN 191

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSM 259
                              + ++      +        ++         A          
Sbjct: 192 -------------------DGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGG 232

Query: 260 ILAPRFSSNGKRALISVQKDE-------------------------AMDIYSVDLQSNA- 293
                +S +G   + SV+  +                           D+Y +D    + 
Sbjct: 233 NDDYTWSPDGSSVVASVRIPQPHGPEAGKNAKAGGKPTGNDESWQTNFDLYRLDATGKSA 292

Query: 294 TERLTN-TLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQD 344
              LT      +    +S D   +         FE+DR G   L  M       + I+  
Sbjct: 293 PVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFG---LMAMDVASGKTREIAPK 349

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S  + V S  G  +  +     +  +  +     +   LV + ++ APT +  G +L
Sbjct: 350 WDRSAGEIVPSADGSSLYTSADDLGEHPLFKIDIASGEATKLVGEGSVHAPTLA--GNTL 407

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            F+R     +G +++  D  G+    I+  A 
Sbjct: 408 AFTRS-SLKSGDQVFVSDAQGQGLRAISQSAG 438



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 88/312 (28%), Gaps = 69/312 (22%)

Query: 183 SVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +G    SL V +   RD +  + LTP    +   P  SP+ + V + +   +   + 
Sbjct: 56  KTANGKPATSLWVRNLRTRDLSPPKRLTPEGWNVN-SPALSPDGKTVYFLS--SKSGSQQ 112

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                     P+++  F   + + + S +GKR   S            DL     ++L  
Sbjct: 113 LYAQPMAGGTPQQLTAFAVDVDSYKLSPDGKRIAFSA---GVFQDCGSDL-GCTKKKLGE 168

Query: 300 TLFINISA------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE- 346
                 S             +++      +F ++             G+     +   + 
Sbjct: 169 LKNNKASGVVYDQLFVRHWDTWNDGRRNTLFVAE---LPAAGAKAVVGASAISATLAGDA 225

Query: 347 -----ASYFDPVWSPQGDLIAFTKFSG-------------------------EKFAIGVM 376
                    D  WSP G  +  +                               F +  +
Sbjct: 226 PSKPFGGNDDYTWSPDGSSVVASVRIPQPHGPEAGKNAKAGGKPTGNDESWQTNFDLYRL 285

Query: 377 KKDG-SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETL 430
              G S    L     +    P +S  G++L +   K     +    L ++D+       
Sbjct: 286 DATGKSAPVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVASGKTRE 345

Query: 431 INTPAYASDPQW 442
           I        P+W
Sbjct: 346 IA-------PKW 350



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 85/284 (29%), Gaps = 43/284 (15%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKV 226
            E G         + +  S      L  +D  G +    LT +       P FS + + +
Sbjct: 257 PEAGKNAKAGGKPTGNDESWQTNFDLYRLDATGKSAPVNLTAANPAWDAGPVFSTDGKTL 316

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF---------SSNGKRALISVQ 277
            Y                R       + + ++  +AP++         S++G     S  
Sbjct: 317 YYRAMKRPGF-----EADRFGLMAMDVASGKTREIAPKWDRSAGEIVPSADGSSLYTSAD 371

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASY----------SPDSSQIVFESDREGKEQ 327
                 ++ +D+ S    +L     ++   +           S  S   VF SD +G+  
Sbjct: 372 DLGEHPLFKIDIASGEATKLVGEGSVHA-PTLAGNTLAFTRSSLKSGDQVFVSDAQGQGL 430

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIA--FTKFSGEKFAIGVMKKDGSQE 383
             + QS G     +       +    W+       +   +    G+ + +  +   G Q 
Sbjct: 431 RAISQSAGELLPEVQFGDYEQFQFKGWNNDTVHGYVVKPYNYQEGKTYPVAFLIHGGPQG 490

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                  N  +  W+P        +   G  G  +  ID +G  
Sbjct: 491 ----SFGNGWSNRWNP--------QTYAGQ-GYAVVMIDFHGST 521


>gi|89890148|ref|ZP_01201659.1| dipeptidyl peptidase [Flavobacteria bacterium BBFL7]
 gi|89518421|gb|EAS21077.1| dipeptidyl peptidase [Flavobacteria bacterium BBFL7]
          Length = 717

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 53/329 (16%), Positives = 110/329 (33%), Gaps = 58/329 (17%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA---TY 231
           S++L VSES       +   V   D  N + LT   D+++  P  SP+ +KVA+      
Sbjct: 98  SKMLIVSESQPIFRYSSHDKVHVYD-MNSKKLTLVSDELVRSPALSPDGKKVAFVFENNI 156

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRS---------MILAPRFSSNGKRALISVQKDEAM 282
             +D+          D    ++ N  S         ++ A ++S + K+       +  +
Sbjct: 157 YYKDLASGTTTQVTSDGLNNKLINGVSDWVYEEEFAIVRAYQWSPDSKQIAFISFDESEV 216

Query: 283 DIYSVDLQSNATER------------------------LT----------NTLFINISAS 308
             +S+D+  N   +                        L+          N  F     +
Sbjct: 217 PEFSMDVYGNELYQKQDVFKYPKAGEKNAVVGLHVYDLLSRKRNEINLNRNEEFYIARIN 276

Query: 309 YSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPV---WSPQGDLIAFT 364
           YSP+        +R       Y +  +G+     ++  +A         +   G  + +T
Sbjct: 277 YSPNGKLAAQVLNRHQDVLDFYYVDQSGNATVAFTEKDKAYVDVTDDLTFLEDGSFL-WT 335

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSID 422
                   I      G +++ +   +      +      + + +   +DG     +YSI 
Sbjct: 336 SEKDNWKHIYHYDASGKEKKQITSGNWDVTSYYGYDAKNKRIFYQSTEDGSINRGIYSIS 395

Query: 423 LNGRNET----LINTPAYASDPQWVGFMD 447
           L G+ +T     I T + +    +  F++
Sbjct: 396 LKGKKKTKLSNRIGTNSASFSSDFSYFIN 424



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 55/375 (14%), Positives = 130/375 (34%), Gaps = 60/375 (16%)

Query: 113 TGRVIKEGKDRLRVE-FRLWDVKDRKQIIGKKFFSSPASWRKIAH----------TISDD 161
           TG ++     +L +  + L D + +  I+ +       S     H           +SD+
Sbjct: 75  TGTLVSSADLKLPIRSYTLSDDESKMLIVSESQPIFRYSSHDKVHVYDMNSKKLTLVSDE 134

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-------IL 214
           + +S            +F +      +   +   +  DG N + +    D        I+
Sbjct: 135 LVRSPALSPDGKKVAFVFENNIYYKDLASGTTTQVTSDGLNNKLINGVSDWVYEEEFAIV 194

Query: 215 FEPRFSPNQQKVAYATYDDEDILR--------------------------------VYLM 242
              ++SP+ +++A+ ++D+ ++                                  VY +
Sbjct: 195 RAYQWSPDSKQIAFISFDESEVPEFSMDVYGNELYQKQDVFKYPKAGEKNAVVGLHVYDL 254

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLT--N 299
            +R         N    I    +S NGK A   + +  + +D Y VD   NAT   T  +
Sbjct: 255 LSRKRNEINLNRNEEFYIARINYSPNGKLAAQVLNRHQDVLDFYYVDQSGNATVAFTEKD 314

Query: 300 TLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
             ++++    ++  D S  ++ S+++  + +Y   ++G ++K+I+           +  +
Sbjct: 315 KAYVDVTDDLTFLEDGS-FLWTSEKDNWKHIYHYDASGKEKKQITSGNWDVTSYYGYDAK 373

Query: 358 GDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
              I +           I  +   G ++  L       + ++S       F       T 
Sbjct: 374 NKRIFYQSTEDGSINRGIYSISLKGKKKTKLSNRIGTNSASFSSD--FSYFINTYSSATT 431

Query: 416 SKLYSIDLNGRNETL 430
             +Y++  + + E +
Sbjct: 432 PPMYTLHTSKKGEQV 446


>gi|67923714|ref|ZP_00517180.1| similar to Periplasmic component of the Tol biopolymer transport
           system [Crocosphaera watsonii WH 8501]
 gi|67854422|gb|EAM49715.1| similar to Periplasmic component of the Tol biopolymer transport
           system [Crocosphaera watsonii WH 8501]
          Length = 169

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 5/133 (3%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISAS 308
           R  N R+  L P+ +S     +    ++ + D+Y  D Q      L     ++      S
Sbjct: 35  RALNSRASDLEPKVTS--TYIVFISDRNGSQDVYLFDAQQRQLISLPGLNALDEIASHPS 92

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S D   +VF S R+GK  +Y+       ++ ++ + +A    P+ + +G  IAF     
Sbjct: 93  ISEDGRYLVFASSRQGKSNIYLYDRETEQKRNLTSNLQAEVRHPIINAEGTQIAFEVAKD 152

Query: 369 EKFAIGVMKKDGS 381
            ++ I +    G+
Sbjct: 153 GQWDIIIYDLFGN 165



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 12/148 (8%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                 +         R  N+   ++    +  S+ IVF SDR G + +Y+  +    ++
Sbjct: 21  GYPRYLNFPFDGGG--RALNSRASDLEPKVT--STYIVFISDRNGSQDVYLFDAQ--QRQ 74

Query: 340 RISQDKEASY----FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-- 393
            IS     +       P  S  G  + F      K  I +  ++  Q+R L  +   +  
Sbjct: 75  LISLPGLNALDEIASHPSISEDGRYLVFASSRQGKSNIYLYDRETEQKRNLTSNLQAEVR 134

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            P  +  G  + F   KDG     +Y +
Sbjct: 135 HPIINAEGTQIAFEVAKDGQWDIIIYDL 162



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 47/117 (40%), Gaps = 4/117 (3%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + + + D      VYL D +  +     G      +   P  S +G+  + +  +    +
Sbjct: 53  IVFIS-DRNGSQDVYLFDAQQRQLISLPGLNALDEIASHPSISEDGRYLVFASSRQGKSN 111

Query: 284 IYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           IY  D ++     LT+ L   +     + + +QI FE  ++G+  + +    G+  +
Sbjct: 112 IYLYDRETEQKRNLTSNLQAEVRHPIINAEGTQIAFEVAKDGQWDIIIYDLFGNPLE 168



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 7/124 (5%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATY 231
           ++ I+F+S+   S      + + D     +  L    + D+I   P  S + + + +A+ 
Sbjct: 50  STYIVFISDRNGS----QDVYLFDAQQRQLISLPGLNALDEIASHPSISEDGRYLVFASS 105

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                  +YL D   ++      N ++ +  P  ++ G +    V KD   DI   DL  
Sbjct: 106 RQGKS-NIYLYDRETEQKRNLTSNLQAEVRHPIINAEGTQIAFEVAKDGQWDIIIYDLFG 164

Query: 292 NATE 295
           N  E
Sbjct: 165 NPLE 168



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 17/126 (13%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G  +      +G  +     +  AS  +P  +     I F         + +      Q
Sbjct: 20  TGYPRYLNFPFDGGGRAL---NSRASDLEPKVT--STYIVFISDRNGSQDVYLFDAQ--Q 72

Query: 383 ERLLVEDSNL------QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-- 434
            +L+              P+ S  GR L+F+  + G   S +Y  D     +  + +   
Sbjct: 73  RQLISLPGLNALDEIASHPSISEDGRYLVFASSRQGK--SNIYLYDRETEQKRNLTSNLQ 130

Query: 435 AYASDP 440
           A    P
Sbjct: 131 AEVRHP 136


>gi|291571282|dbj|BAI93554.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 156

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 5/134 (3%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSP 311
           N  S  + P+ SS+    + +  +    DIY  D +      L     I+      + S 
Sbjct: 24  NSPSTEMNPQISSD--YLVFASDRQGRQDIYLYDRKQLELIDLPGLNSIDAIASEPAIST 81

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D + IVF S R G+  +Y+   N    + ++ +  A    P  +    +IAF      ++
Sbjct: 82  DGNYIVFNSTRGGQSDIYLYNRNTRQLRNLTDNLNAQVRHPTINADASVIAFESSLNGQW 141

Query: 372 AIGVMKKDGSQERL 385
            I V  + G    +
Sbjct: 142 DIVVYNRYGQALNI 155



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 6/125 (4%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSP 356
           N+    ++   S D   +VF SDR+G++ +Y+      +   +      +A   +P  S 
Sbjct: 24  NSPSTEMNPQISSD--YLVFASDRQGRQDIYLYDRKQLELIDLPGLNSIDAIASEPAIST 81

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDT 414
            G+ I F    G +  I +  ++  Q R L +  ++ ++ PT +     + F    +G  
Sbjct: 82  DGNYIVFNSTRGGQSDIYLYNRNTRQLRNLTDNLNAQVRHPTINADASVIAFESSLNGQW 141

Query: 415 GSKLY 419
              +Y
Sbjct: 142 DIVVY 146



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 2/135 (1%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           ++R  + +       P+ S +    A      +DI         +   P  + +  ++  
Sbjct: 17  DLRVNSVNSPSTEMNPQISSDYLVFASDRQGRQDIYLYDRKQLELIDLPG-LNSIDAIAS 75

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFES 320
            P  S++G   + +  +    DIY  +  +     LT+ L   +   + + D+S I FES
Sbjct: 76  EPAISTDGNYIVFNSTRGGQSDIYLYNRNTRQLRNLTDNLNAQVRHPTINADASVIAFES 135

Query: 321 DREGKEQLYVMQSNG 335
              G+  + V    G
Sbjct: 136 SLNGQWDIVVYNRYG 150



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 27/88 (30%), Gaps = 1/88 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S D I  EP  S +   + + +        +YL +    +      N  + +  P  +
Sbjct: 67  LNSIDAIASEPAISTDGNYIVFNSTRGGQS-DIYLYNRNTRQLRNLTDNLNAQVRHPTIN 125

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT 294
           ++          +   DI   +    A 
Sbjct: 126 ADASVIAFESSLNGQWDIVVYNRYGQAL 153


>gi|283480412|emb|CAY76328.1| Uncharacterized protein yidR [Erwinia pyrifoliae DSM 12163]
          Length = 468

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 51/157 (32%), Gaps = 18/157 (11%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                          +RLT T       +  S   +   SPD S I F   D  G  QL+
Sbjct: 316 GTATTLPAPPAGVKQKRLTYTAQRAYPGLATSPRHWLRSSPDGSAIAFLMKDDAGIVQLW 375

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +   G   +++++          W P G  +AF   +     I +        R + E 
Sbjct: 376 TVSPQGGSPRQVTRCDSDIQSAFSWHPDGRRLAFVCDN----RITLCDVASGALRGIGER 431

Query: 390 SN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           S       A  +SP GR + F R   G        +D
Sbjct: 432 SELPPVADAVVFSPDGRRVAFLRDCVGYRQIFTVLVD 468



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 11/130 (8%)

Query: 212 QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +   PR     SP+   +A+   DD  I++++ +  +     +       +  A  +  
Sbjct: 343 GLATSPRHWLRSSPDGSAIAFLMKDDAGIVQLWTVSPQGGSPRQVTRCDSDIQSAFSWHP 402

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREG 324
           +G+R            I   D+ S A   +   +    +  +  +SPD  ++ F  D  G
Sbjct: 403 DGRRLAFVCDN----RITLCDVASGALRGIGERSELPPVADAVVFSPDGRRVAFLRDCVG 458

Query: 325 KEQLYVMQSN 334
             Q++ +  +
Sbjct: 459 YRQIFTVLVD 468



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 3/96 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G + R +T     I     + P+ +++A+   +   +  V     R      
Sbjct: 373 QLWTVSPQGGSPRQVTRCDSDIQSAFSWHPDGRRLAFVCDNRITLCDVASGALRGIGERS 432

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            +     +  A  FS +G+R            I++V
Sbjct: 433 EL---PPVADAVVFSPDGRRVAFLRDCVGYRQIFTV 465


>gi|309790635|ref|ZP_07685188.1| WD-40 repeat-containing protein [Oscillochloris trichoides DG6]
 gi|308227301|gb|EFO80976.1| WD-40 repeat-containing protein [Oscillochloris trichoides DG6]
          Length = 436

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 51/299 (17%), Positives = 102/299 (34%), Gaps = 27/299 (9%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIY--QSITGEKGDFNSRILFVSESVVSGIIKNS 192
           D + +    +      WR      +DD Y   ++  + G+ NS        V++   +N 
Sbjct: 158 DGQHLATGSWDGVARIWR------ADDGYLLHTLQADLGEVNSVNFSPDGRVLAAAGRNQ 211

Query: 193 LCVM--DRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           +  +    DG  +  L         +F   FSP+   +   ++D      V L +    +
Sbjct: 212 VVQVWRVADGTPLYRLQGPGGHSGAVFSVSFSPDGVHLVSGSWDH----TVCLWNLIDKQ 267

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +R  +    + +  FS  G+    +   D  + I+ V         L        S +
Sbjct: 268 PIRRFTDHAGAVNSVAFSPTGRLIA-TGSHDRNVRIWRV-ADGTLLNTLQGHTDAIFSVA 325

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +   +  +G  +L+ +         + Q    + F  ++SP G  +A +    
Sbjct: 326 FSPDGRLLA-SAGTDGSIRLWRV--ADGSLLYVLQANSGAVFSVIFSPDGMTMA-SGDYN 381

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               +  +        +      + +  +SP G  L        D   KL+  DL+G  
Sbjct: 382 RSVRLWRVIDGTLIHTISAHGEGVTSLAYSPDGNCLA---SGSFDASVKLW--DLHGEP 435



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 84/241 (34%), Gaps = 19/241 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++  T S    +    +S + Q +A  ++D   + R++  D         +      +
Sbjct: 137 HPVQRRTISVKSWVNSIAYSRDGQHLATGSWD--GVARIWRADDGYLLHT--LQADLGEV 192

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIV 317
            +  FS +G+    +  +++ + ++ V        RL           S S+SPD   +V
Sbjct: 193 NSVNFSPDGRVLA-AAGRNQVVQVWRV-ADGTPLYRLQGPGGHSGAVFSVSFSPDGVHLV 250

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S       + +         R   D   +     +SP G LIA T        I  + 
Sbjct: 251 SGS---WDHTVCLWNLIDKQPIRRFTDHAGAVNSVAFSPTGRLIA-TGSHDRNVRIWRV- 305

Query: 378 KDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            DG+    L      + +  +SP GR L        D   +L+ +  +G    ++   + 
Sbjct: 306 ADGTLLNTLQGHTDAIFSVAFSPDGRLLA---SAGTDGSIRLWRV-ADGSLLYVLQANSG 361

Query: 437 A 437
           A
Sbjct: 362 A 362


>gi|269837955|ref|YP_003320183.1| hypothetical protein Sthe_1929 [Sphaerobacter thermophilus DSM
           20745]
 gi|269787218|gb|ACZ39361.1| hypothetical protein Sthe_1929 [Sphaerobacter thermophilus DSM
           20745]
          Length = 407

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 54/284 (19%), Positives = 102/284 (35%), Gaps = 34/284 (11%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE- 234
            +     S V       L  M R+G     +T  RD + F P  SP+ ++VA        
Sbjct: 75  PLSVPHASRVYFTSGGDLWQMPREGPPAPVVT-GRDILAFGP--SPDGEQVAVVFATQPE 131

Query: 235 --DILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDEAMDIYSVD 288
                 V +M        +      +   AP     +S  G    ++ ++D ++ +  + 
Sbjct: 132 MNGNSTVGIMAADGSVVLELPDPAPAESQAPVRAIAWSPTGSAVAVA-RQDGSLTLVDI- 189

Query: 289 LQSNATERL--TNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRI-SQ 343
                 + L       +    S+SPD + + +   S       LYV+ +   ++ ++ + 
Sbjct: 190 --GGTVQFLAPPQPESLPDDLSWSPDGTMLAYRDPSLPGQASSLYVVSAATGERTQLVAG 247

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSG----EKFAIGVMKKDGSQERLLVEDSNLQAP---- 395
           + + +  D +W P    IA+ + S         + V+   G   +LLV      AP    
Sbjct: 248 ETDGAVLDLIWLPGRQAIAYVRSSPASIEGGGDVFVVPASGGPSQLLVSAGRF-APVAGV 306

Query: 396 ---TWSPSGRSLIFSRKKDGDTGS---KLYSIDLNGRNETLINT 433
                +P GR+L  S    G        L+ +D +  + T + T
Sbjct: 307 VNLAAAPDGRTLAMSVYIPGTDHPLFHGLWLLDTSTMDLTQVPT 350



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 62/189 (32%), Gaps = 24/189 (12%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FES--DREGK 325
            R   +       D++ +  +      +T    +      SPD  Q+   F +  +  G 
Sbjct: 82  SRVYFTS----GGDLWQMPREGPPAPVVTGRDILAFGP--SPDGEQVAVVFATQPEMNGN 135

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             + +M ++GS    +     A    P     WSP G  +A  +  G    + ++   G 
Sbjct: 136 STVGIMAADGSVVLELPDPAPAESQAPVRAIAWSPTGSAVAVARQDGS---LTLVDI-GG 191

Query: 382 QERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLIN--TPA 435
             + L        P   +WSP G  L +         S LY +    G    L+   T  
Sbjct: 192 TVQFLAPPQPESLPDDLSWSPDGTMLAYRDPSLPGQASSLYVVSAATGERTQLVAGETDG 251

Query: 436 YASDPQWVG 444
              D  W+ 
Sbjct: 252 AVLDLIWLP 260



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 69/225 (30%), Gaps = 30/225 (13%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMDTRI 246
               SL ++D  G       P  + +  +  +SP+   +AY           +Y++    
Sbjct: 179 RQDGSLTLVDIGGTVQFLAPPQPESLPDDLSWSPDGTMLAYRDPSLPGQASSLYVVSAAT 238

Query: 247 DRAPKRI-GNFRSMILAPRFSSNGKRALIS----VQKDEAMDIYSVDLQSNATERL-TNT 300
               + + G     +L   +    +            +   D++ V      ++ L +  
Sbjct: 239 GERTQLVAGETDGAVLDLIWLPGRQAIAYVRSSPASIEGGGDVFVVPASGGPSQLLVSAG 298

Query: 301 LFINISASYS----PDSSQIVFESDREGKEQ-----LYVMQSNGSDQKRISQDKEASYFD 351
            F  ++   +    PD   +       G +      L+++ ++  D  ++  ++  +  D
Sbjct: 299 RFAPVAGVVNLAAAPDGRTLAMSVYIPGTDHPLFHGLWLLDTSTMDLTQVPTERGEAVTD 358

Query: 352 PVWSPQGDLIAFTKFSGEK------------FAIGVMKKDGSQER 384
             W      + F      +            FA+  +     Q R
Sbjct: 359 LWWVD--RRLVFRAVDESRLVHAGIYTGTEPFALYEVDPATLQVR 401



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 53/157 (33%), Gaps = 13/157 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +  +L   +  + G   +   V    G   + +    D  + +  + P +Q +AY     
Sbjct: 213 DGTMLAYRDPSLPGQASSLYVVSAATGERTQLVAGETDGAVLDLIWLPGRQAIAYVRSSP 272

Query: 234 ---EDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----SSNGKRALISVQKDEAMD--- 283
              E    V+++      +   +   R   +A       + +G+   +SV          
Sbjct: 273 ASIEGGGDVFVVPASGGPSQLLVSAGRFAPVAGVVNLAAAPDGRTLAMSVYIPGTDHPLF 332

Query: 284 --IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             ++ +D  +    ++       ++  +  D  ++VF
Sbjct: 333 HGLWLLDTSTMDLTQVPTERGEAVTDLWWVD-RRLVF 368


>gi|14590723|ref|NP_142793.1| hypothetical protein PH0863 [Pyrococcus horikoshii OT3]
 gi|3257274|dbj|BAA29957.1| 642aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 642

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 101/321 (31%), Gaps = 55/321 (17%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            + G    F  + +F    +          +   DG  ++  T         PRFSPN +
Sbjct: 24  KLVGNVDVFKGKAVFQVTEISLKDDDYFSKLYLYDGKRVKPFTSGNK--DSNPRFSPNGK 81

Query: 225 KVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALIS----VQKD 279
            +A+ +  D++     L     D    + +  F+  I   RF+ +GK   +     V+K 
Sbjct: 82  LIAFTSKRDKEGKESELYVIPTDGGEARLLAKFKYGIKNLRFTEDGKSIAVVTPIDVEKK 141

Query: 280 EAMD-----------------------IYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              D                       +Y VD++S   +RLT          +   + ++
Sbjct: 142 GNDDVHIIREIPFWFNGVGWIYGKRNVVYLVDVESGKKKRLTPKNLNVDQIRF--HNGRL 199

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP--QGDLIA----FTKFSGEK 370
            F +  + + +  +      + +++ +     +    + P   G  +       +     
Sbjct: 200 YFTAQEDRERKPLISDLYVLENRKVRKLTPGKWRILDFLPLDDGSFVLKANTLERGIPTN 259

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSG--------------RSLIFSRKKDGDTGS 416
             I        + + L +D +  A   S +                 + +         +
Sbjct: 260 AHIYHYDPKTGELKKLTKDLDRNAYN-SLNSDVRGSQRAELVYKEGWIYYVATDGPR--A 316

Query: 417 KLYSIDLNGRNETLINTPAYA 437
            L+ ++L+G+ E +I      
Sbjct: 317 NLFRVNLDGKIERVIGGDRSV 337


>gi|262384013|ref|ZP_06077149.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262294911|gb|EEY82843.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 489

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 65/479 (13%), Positives = 146/479 (30%), Gaps = 113/479 (23%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSP------VSI--AFTKFVSIDELGGKV 65
           ++++C ++  +            +      +  P      V +  A   F  +D+    +
Sbjct: 3   RLSICWIIGCLLELVACRPEVPTQAEQGETDVFPDYREVTVPVNMAPPNFKLVDQQLQGI 62

Query: 66  SE--------VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
                     +++ D     VFNL                    DW  L           
Sbjct: 63  IRLKTMNGELIIAAD---HGVFNLPET-----------------DWKVLSQDA------- 95

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSR 176
                              KQI    +F  P + W+++    S  IY S          R
Sbjct: 96  -----------------QGKQIDVTVYFREPQSDWKQM----SFPIYVSRDSVDAYLVYR 134

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            +F    + + +     CV +    +I    + +   +          +++ +      +
Sbjct: 135 RIFPGYRMWNEMGIYQRCVENYVEKSILDNQSTNNSCMNCHAFCERQGEQMLFHQRGSHN 194

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------DEAMDIYSVD 288
              +         A +R G   S +  P +  +G+    S  +        +   I   D
Sbjct: 195 GTYLIDHRQVKKIALERDGKPASFVY-PYWHPSGRYVAFSTNETHQDFHLSDENRIEVYD 253

Query: 289 LQS------NATERLTNTL------FINISASYSPDSSQIVFES---------DREGKEQ 327
           ++S         ER+ ++             +++PD + ++F S          R+ +  
Sbjct: 254 VESDVLIYDTEKERVFSSPLLASMACYETFPTFTPDGNYLLFCSADSVCMPENYRDVRYN 313

Query: 328 LYVMQSN------GSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIG----- 374
           L  +  +      G+    +   +EA      P  S  G  + +T      F+I      
Sbjct: 314 LLRVAFDPKDGSIGTQVDTLYNAREAGRSVKFPRVSLDGKRLLYTVSDYGNFSIWHKDAD 373

Query: 375 --VMKKDGSQERLL--VEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             ++         L  V   ++++  +WS + R  +FS ++     ++ Y + ++ R +
Sbjct: 374 LHMLDLSTGAIDSLPEVNSPDVESYHSWSGNSRWFVFSSRRGDGLFTRPYLVHVDERGQ 432


>gi|134096868|ref|YP_001102529.1| peptidase S9, prolyl oligopeptidase active site region
           [Saccharopolyspora erythraea NRRL 2338]
 gi|291006689|ref|ZP_06564662.1| peptidase S9, prolyl oligopeptidase active site region
           [Saccharopolyspora erythraea NRRL 2338]
 gi|133909491|emb|CAL99603.1| peptidase S9, prolyl oligopeptidase active site region
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 606

 Score = 73.5 bits (179), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 62/341 (18%), Positives = 112/341 (32%), Gaps = 45/341 (13%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL-----FVSES 183
           R +DV D  +++     S      +IA         ++T   G  + R L      V + 
Sbjct: 15  RAFDVDDSGRVLAGSDESGSVQLAEIAGGE----VSALTALPGAVSGRYLPGERAVVVQH 70

Query: 184 VVSGIIKNSLCVMDRD----GA----NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
              G  ++ L ++  D    G     ++R L      +       P   +V YAT     
Sbjct: 71  DTDGDERSQLSLLTLDVPRTGPATMRDLRPLVHDSRYVHRLLDVLP--GRVVYATNRRNG 128

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--QKDEAMDIYSVD----L 289
           +    ++ +    A + + +   M+L    S +G+   ++V  +K  +  I  VD     
Sbjct: 129 VDFDVVVRSATSGAEEVVYDRGGMVLEAASSPDGRYLAVTVPAEKPLSDQIILVDTMPVT 188

Query: 290 QSNATERLTNTL--FINISASYSPDSSQIVFE----SDREGKEQLYVMQSNGSDQKRISQ 343
                  LT+      +    + PD+S +V       DR G  ++        +++ +  
Sbjct: 189 ADEEVTELTDADAHARHTGVRWLPDASALVVTTNLDRDRTGVARI---DPRTGERRWLVT 245

Query: 344 DKEASYFDPVW-SPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQ----AP 395
             E       W +P G  +           + +        R    L  D        AP
Sbjct: 246 SDEHDLTG--WLAPDGSTLLVQANVEGAARLALHDAATGAVRRDVRLPGDGWCTYPLPAP 303

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            WSP+ R    S       G  L  +D  G    L ++ A 
Sbjct: 304 VWSPNSRFAALSYSSTATPGDAL-LLDSGGEVRALTDSAAQ 343



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 56/162 (34%), Gaps = 9/162 (5%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           D +   TG +   ++  L V+ ++     +  +  +D      R+L  S +  L     +
Sbjct: 200 DAHARHTGVRWLPDASALVVTTNL--DRDRTGVARIDPRTGERRWLVTSDEHDLTG-WLA 256

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-----GNFRSMILAPRFSSNGKRALIS 275
           P+   +     + E   R+ L D       + +     G     + AP +S N + A +S
Sbjct: 257 PDGSTLL-VQANVEGAARLALHDAATGAVRRDVRLPGDGWCTYPLPAPVWSPNSRFAALS 315

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                      +         LT++     SA   P ++  V
Sbjct: 316 YSSTATPGDALLLDSGGEVRALTDSAAQLGSARPVPPTAHRV 357


>gi|302881199|ref|XP_003039518.1| hypothetical protein NECHADRAFT_89121 [Nectria haematococca mpVI
            77-13-4]
 gi|256720369|gb|EEU33805.1| hypothetical protein NECHADRAFT_89121 [Nectria haematococca mpVI
            77-13-4]
          Length = 1230

 Score = 73.1 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 84/256 (32%), Gaps = 21/256 (8%)

Query: 170  KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             G   S ++F +  + + S     ++ + D             +  +    FS + Q++A
Sbjct: 877  HGRGVSSVVFSADGQRLASASYDKTVKIWDAATGACVQTLEGHNSSVSSVVFSADGQRLA 936

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A+ D      V + D       + +      + +  FS++G+R   S   D  + I+  
Sbjct: 937  SASGDS----TVKIWDAATGACVQTLEGHGDSVRSVVFSADGQRLA-SASGDSTVKIW-- 989

Query: 288  DLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D  + A  + L     +  S  +S D  ++   S     + + +  +      +  +   
Sbjct: 990  DAATGACVQTLEGHNSLVSSVVFSADGQRLASASY---DKTVKIWDAATGACVQTLEGHG 1046

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSL 404
                  V+S     +A          + +           +E       +  +S  G+ L
Sbjct: 1047 DWVSSVVFSADSQRLASGSIDST---VKIWDAATGACVQTLEGHGDWVSSVVFSADGQRL 1103

Query: 405  IFSRKKDGDTGSKLYS 420
              +     D+  K++ 
Sbjct: 1104 ASASD---DSTVKIWD 1116



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 70/212 (33%), Gaps = 14/212 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + + S    +++ + D                +    FS + Q++A A+ D      V +
Sbjct: 933  QRLASASGDSTVKIWDAATGACVQTLEGHGDSVRSVVFSADGQRLASASGDS----TVKI 988

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
             D       + +    S++ +  FS++G+R   S   D+ + I+  D  + A  + L   
Sbjct: 989  WDAATGACVQTLEGHNSLVSSVVFSADGQRLA-SASYDKTVKIW--DAATGACVQTLEGH 1045

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S  +S DS ++   S       + +  +      +  +         V+S  G  
Sbjct: 1046 GDWVSSVVFSADSQRLASGSI---DSTVKIWDAATGACVQTLEGHGDWVSSVVFSADGQR 1102

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            +A          + +           ++   +
Sbjct: 1103 LASASDDST---VKIWDAATGACVQTLDVGRM 1131



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 75/226 (33%), Gaps = 17/226 (7%)

Query: 219  FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FSP    +   +   +   I     M++  +   + +      + +  FS++G+R   S 
Sbjct: 838  FSPTHSLIRELFEKEEPNWITLKPSMESDWNACLQTLEGHGRGVSSVVFSADGQRLA-SA 896

Query: 277  QKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D+ + I+  D  + A  + L        S  +S D  ++   S   G   + +  +  
Sbjct: 897  SYDKTVKIW--DAATGACVQTLEGHNSSVSSVVFSADGQRLASAS---GDSTVKIWDAAT 951

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQ 393
                +  +    S    V+S  G  +A          + +           +E  N  + 
Sbjct: 952  GACVQTLEGHGDSVRSVVFSADGQRLASAS---GDSTVKIWDAATGACVQTLEGHNSLVS 1008

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            +  +S  G+ L  +     D   K++        +TL     + S 
Sbjct: 1009 SVVFSADGQRLASASY---DKTVKIWDAATGACVQTLEGHGDWVSS 1051


>gi|317159406|ref|XP_001827287.2| hypothetical protein AOR_1_1430024 [Aspergillus oryzae RIB40]
          Length = 1298

 Score = 73.1 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 77/223 (34%), Gaps = 16/223 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D     +++       ++    FS + Q +A  +YD      + L D  
Sbjct: 971  SGSYDKTIKLWDPATGALKHTLEGHSDLVDSVAFSGDGQLLASGSYDK----TIKLWDPA 1026

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                   +     ++ +  FS +G+    S   D+ + ++  D  + A +        ++
Sbjct: 1027 TGALKHTLEGHSDLVDSVAFSGDGQLLA-SGSDDKTIKLW--DAATGALKHTLEGHSNSV 1083

Query: 306  -SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++S D   +   S     + L +        K I +    S +   +S  G L+A  
Sbjct: 1084 QSVAFSGDGQLLASGSY---DKTLKLWDPATGVLKHILEGHCGSVYSVAFSGDGQLLASG 1140

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
                    I +        +  +E  +    +  +S  G+ L 
Sbjct: 1141 SRDKT---IKLWDAATGALKHTLEGHSDLVDSVVFSGDGQLLA 1180



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 54/156 (34%), Gaps = 11/156 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D     +++        +    FS + Q +A  +YD      + L D  
Sbjct: 1055 SGSDDKTIKLWDAATGALKHTLEGHSNSVQSVAFSGDGQLLASGSYDK----TLKLWDPA 1110

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                   +      + +  FS +G+    S  +D+ + ++  D  + A +  L     + 
Sbjct: 1111 TGVLKHILEGHCGSVYSVAFSGDGQLLA-SGSRDKTIKLW--DAATGALKHTLEGHSDLV 1167

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             S  +S D   +   S     + + +        ++
Sbjct: 1168 DSVVFSGDGQLLASGSR---DKTIKLWDPATGALRQ 1200


>gi|312174323|emb|CBX82576.1| Uncharacterized protein yidR [Erwinia amylovora ATCC BAA-2158]
          Length = 435

 Score = 73.1 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 20/167 (11%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                          +RLT T       +  +   +   SPD S I F   D  G  QL+
Sbjct: 270 GTATTLPAPPAGVRQKRLTYTSQRPYPGLVTTPRHWLRSSPDGSAIAFLMRDDTGVVQLW 329

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +   G   +++++          W P G  +AF   +     I +          + E 
Sbjct: 330 TVSPQGGSPRQVTRCASDIQSAFSWHPDGRQLAFVSDN----RITLCDVVSGALHRIGER 385

Query: 390 SN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           S       A  +SP G+ + F R   G    +++++ ++ R     +
Sbjct: 386 SEAPPVADAVVFSPDGKRVAFLRDCAGYR--QIFTVQVDQRPRERPS 430



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 56/138 (40%), Gaps = 11/138 (7%)

Query: 212 QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            ++  PR     SP+   +A+   DD  +++++ +  +     +       +  A  +  
Sbjct: 297 GLVTTPRHWLRSSPDGSAIAFLMRDDTGVVQLWTVSPQGGSPRQVTRCASDIQSAFSWHP 356

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREG 324
           +G++            I   D+ S A  R+   +    +  +  +SPD  ++ F  D  G
Sbjct: 357 DGRQLAFVSDN----RITLCDVVSGALHRIGERSEAPPVADAVVFSPDGKRVAFLRDCAG 412

Query: 325 KEQLYVMQSNGSDQKRIS 342
             Q++ +Q +   ++R S
Sbjct: 413 YRQIFTVQVDQRPRERPS 430



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 3/105 (2%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G + R +T     I     + P+ +++A+ +  D  I    ++   + R  +
Sbjct: 327 QLWTVSPQGGSPRQVTRCASDIQSAFSWHPDGRQLAFVS--DNRITLCDVVSGALHRIGE 384

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           R      +  A  FS +GKR            I++V +     ER
Sbjct: 385 R-SEAPPVADAVVFSPDGKRVAFLRDCAGYRQIFTVQVDQRPRER 428


>gi|149175661|ref|ZP_01854280.1| putative serine/threonine-protein kinase [Planctomyces maris DSM
           8797]
 gi|148845380|gb|EDL59724.1| putative serine/threonine-protein kinase [Planctomyces maris DSM
           8797]
          Length = 1004

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 82/275 (29%), Gaps = 42/275 (15%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEP-------RFSPNQQKVAYATYDDEDILRVY 240
             ++ + +   DG     L   +     +P        +SP+   +   +     +L + 
Sbjct: 710 NHRSQIRLYHPDGTPGDVLIDQKLMRTGQPQPAYWKLAWSPDSHNLIACSTGKNAVLHI- 768

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             DT+ ++    + +    I    +S +GK    S    +   I     Q +  +R T  
Sbjct: 769 --DTQTNQIEPWLQDHPFSIHQAVWSPDGKSIAFS----DDKQILLASPQGDIQKRHTLA 822

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP--QG 358
                   +SPDS  ++  S+       Y++   G        +     +    +P   G
Sbjct: 823 NLWAHELLWSPDSESLLVLSNSS-----YLIPLKGKPVPFRKAESNLRDYLLAATPGRDG 877

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-------SLI------ 405
             I           +        + + +VE  +   P W    R        +       
Sbjct: 878 QRIL---ALDNLLELQWYDFTTGEAQAVVEPPSATVPVW--DSRGDLPVQNMVWNRRGTQ 932

Query: 406 ---FSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              FSR       S +   + +G     ++ P  A
Sbjct: 933 LATFSRYNTTSRRSHIQLWNADGTGAETVSIPGSA 967



 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 82/249 (32%), Gaps = 25/249 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              + +  ++        +SP+ +   Y    ++ +    +  TR              I
Sbjct: 633 QTHQSIRFNKWTADSWYSWSPDSRS--YCLVTNQGVTISSIDPTRKAVQIPINIPLEGRI 690

Query: 261 LAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINIS--------ASYSP 311
            +  +  +G+   +++  ++    I          + L +   +            ++SP
Sbjct: 691 SSLAWRPDGRDIAVALYHENHRSQIRLYHPDGTPGDVLIDQKLMRTGQPQPAYWKLAWSP 750

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           DS  ++  S   GK  +  + +  +  +   QD   S    VWSP G  IAF+    +  
Sbjct: 751 DSHNLIACS--TGKNAVLHIDTQTNQIEPWLQDHPFSIHQAVWSPDGKSIAFS----DDK 804

Query: 372 AIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            I +    G  Q+R  + +       WSP   SL+             Y I L G+    
Sbjct: 805 QILLASPQGDIQKRHTLANLWAHELLWSPDSESLLVLSNSS-------YLIPLKGKPVPF 857

Query: 431 INTPAYASD 439
               +   D
Sbjct: 858 RKAESNLRD 866



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 82/247 (33%), Gaps = 35/247 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--RFSSNGKRALIS 275
           RFSP+ +    +  ++  IL +  + T  +    +   F          +S + +     
Sbjct: 602 RFSPDGKYYLSSDGNNSPILTLTQVATGEELQTHQSIRFNKWTADSWYSWSPDSRS--YC 659

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFE-SDREGKEQLYVM 331
           +  ++ + I S+D  +    ++   + +     S ++ PD   I         + Q+ + 
Sbjct: 660 LVTNQGVTISSIDP-TRKAVQIPINIPLEGRISSLAWRPDGRDIAVALYHENHRSQIRLY 718

Query: 332 QSNGSDQKRI-------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             +G+    +       +   + +Y+   WSP    +             V+  D    +
Sbjct: 719 HPDGTPGDVLIDQKLMRTGQPQPAYWKLAWSPDSHNLIACSTGKN----AVLHIDTQTNQ 774

Query: 385 LLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL-INTPAYA 437
           +  E      P       WSP G+S+ FS  K      ++      G  +        +A
Sbjct: 775 I--EPWLQDHPFSIHQAVWSPDGKSIAFSDDK------QILLASPQGDIQKRHTLANLWA 826

Query: 438 SDPQWVG 444
            +  W  
Sbjct: 827 HELLWSP 833


>gi|21070360|gb|AAM34272.1| dipeptidyl aminopeptidase [Xanthomonas arboricola pv. juglandis]
          Length = 713

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 10/114 (8%)

Query: 260 ILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYS 310
           + +P  S +G   +       S     A  +++ +L++        LT   +   S + S
Sbjct: 36  VSSPTLSPDGSVLVFAKRQAKSSNGKPATGLWTRNLRTRDAAPPRWLTPDGWNVNSPALS 95

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           PD   + F S + G +QLY     G   ++++            SP G  IAF+
Sbjct: 96  PDGKTVYFLSSKSGTQQLYAQPLAGGAPQQLT-AFAVDVDSYKLSPDGKRIAFS 148



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 7/114 (6%)

Query: 214 LFEPRFSPNQQKVAYATYDDED-------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  SP+   + +A    +         L    + TR    P+ +      + +P  S
Sbjct: 36  VSSPTLSPDGSVLVFAKRQAKSSNGKPATGLWTRNLRTRDAAPPRWLTPDGWNVNSPALS 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +GK       K     +Y+  L   A ++LT       S   SPD  +I F +
Sbjct: 96  PDGKTVYFLSSKSGTQQLYAQPLAGGAPQQLTAFAVDVDSYKLSPDGKRIAFSA 149



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 11/123 (8%)

Query: 306 SASYSPDSSQIVF------ESDREGKEQLYVMQS---NGSDQKRISQDKEASYFDPVWSP 356
           S + SPD S +VF       S+ +    L+       + +  + ++ D   +   P  SP
Sbjct: 38  SPTLSPDGSVLVFAKRQAKSSNGKPATGLWTRNLRTRDAAPPRWLTPDG-WNVNSPALSP 96

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTG 415
            G  + F         +      G   + L   + ++ +   SP G+ + FS     D G
Sbjct: 97  DGKTVYFLSSKSGTQQLYAQPLAGGAPQQLTAFAVDVDSYKLSPDGKRIAFSAGVFQDCG 156

Query: 416 SKL 418
           S L
Sbjct: 157 SDL 159



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 58/329 (17%), Positives = 104/329 (31%), Gaps = 53/329 (16%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R      S  ++Q    + G   +R+  +  +  SG++ + L V   D  N
Sbjct: 135 SYKLSPDGKRIA---FSAGVFQDCGSDLGCTKTRLAKLKSAKASGVVYDQLFVRHWDTWN 191

Query: 203 -------------IRYLTPSRDQILFEPRF------SPNQQKVAYATYDDED---ILRVY 240
                                      PR+      SP      YA            V 
Sbjct: 192 DGRRNTLFVADLPAAGGKAVAGASAIAPRWPAMRPSSPFGGNDDYAWVARRRQCGGAHVP 251

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGK---RALISVQKDEAMDIYSVDLQSNATERL 297
           L    I     + G        P  ++ G+   R    + +       S+         L
Sbjct: 252 LPKPGIGPETGKKGPPTRAPSPPAKANPGQAQFRPCTGLNRPGKPGPGSI---------L 302

Query: 298 TN-TLFINISASYSPDSSQIV---------FESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           T     +   A +S  +++           FE+DR G   L  M       + I+   + 
Sbjct: 303 TAANPGLGCRARFSAATARRCTTGAIKRPGFEADRFG---LMAMDVASGKSREIAPKWDR 359

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           S  + V S  G  +  +     +  +  +     Q   LV + ++ APT +  G +L F+
Sbjct: 360 SAGEIVLSADGASLYTSADDLGEHPLFKIDIASGQATKLVGEGSVHAPTLA--GNTLAFT 417

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           R     +G +++  D+ G+    I   A 
Sbjct: 418 RN-SLKSGDQVFVSDVQGQGLRAITQSAG 445



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 185 VSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +G     L   +   RD A  R+LTP    +   P  SP+ + V + +   +   +   
Sbjct: 58  SNGKPATGLWTRNLRTRDAAPPRWLTPDGWNVN-SPALSPDGKTVYFLS--SKSGTQQLY 114

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
                  AP+++  F   + + + S +GKR   S 
Sbjct: 115 AQPLAGGAPQQLTAFAVDVDSYKLSPDGKRIAFSA 149


>gi|325474210|gb|EGC77398.1| hypothetical protein HMPREF9353_01748 [Treponema denticola F0402]
          Length = 449

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 69/178 (38%), Gaps = 20/178 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N + + P  D      + SP+   +AY    D      Y  +  +      +  +    
Sbjct: 141 FNGKNIGPYEDIRSL--KISPDGNHIAYVAKTDGKYRIGYDDELWMMYEASDVYLYADDG 198

Query: 261 LAP-RFSSNGKRALISVQKDEAMDIYS----VDLQSNATERLTNTLFINISASYSPDSSQ 315
            +  +FS +GK+   SV+KD+   ++     + +++ A            +  +SPD   
Sbjct: 199 FSLLQFSHDGKKLAYSVKKDDKNFLFVGGRFIPIKTGA-----------YNLVFSPDDKN 247

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           I F +D + K  L++   +    KRI  ++    F   +S  G  + +T     ++ I
Sbjct: 248 IAFTTDIDKKSVLFISSLSTDKTKRI--NEAEFIFGVKFSHDGKDLTYTNKENGRYHI 303



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 78/226 (34%), Gaps = 39/226 (17%)

Query: 211 DQILFEPRFS--PNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-----IGNFRSMILAP 263
           +   ++  +S   + Q+  Y +  D  +  +   +       K         F    + P
Sbjct: 91  ENNFYKNTWSIISDGQE--YTSILDNGLPDIKNNNYETAYIIKVSPIEYYILFNGKNIGP 148

Query: 264 -------RFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISAS-- 308
                  + S +G       + D         +++ +   S+        L+ +   S  
Sbjct: 149 YEDIRSLKISPDGNHIAYVAKTDGKYRIGYDDELWMMYEASDV------YLYADDGFSLL 202

Query: 309 -YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +S D  ++ +   ++ K  L+V    G     I        ++ V+SP    IAFT   
Sbjct: 203 QFSHDGKKLAYSVKKDDKNFLFV----GGRFIPIKTG----AYNLVFSPDDKNIAFTTDI 254

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            +K  + +      + + + E   +    +S  G+ L ++ K++G 
Sbjct: 255 DKKSVLFISSLSTDKTKRINEAEFIFGVKFSHDGKDLTYTNKENGR 300



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 14/124 (11%)

Query: 310 SPDSSQIVFESDREGKEQL-----YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           SPD + I + +  +GK ++       M    SD    + D  +      +S  G  +A++
Sbjct: 158 SPDGNHIAYVAKTDGKYRIGYDDELWMMYEASDVYLYADDGFSLL---QFSHDGKKLAYS 214

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               +K  + V    G    +     NL    +SP  +++ F+   D  +   + S+  +
Sbjct: 215 VKKDDKNFLFV---GGRFIPIKTGAYNL---VFSPDDKNIAFTTDIDKKSVLFISSLSTD 268

Query: 425 GRNE 428
               
Sbjct: 269 KTKR 272


>gi|145512775|ref|XP_001442299.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409635|emb|CAK74902.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1708

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 47/301 (15%), Positives = 92/301 (30%), Gaps = 41/301 (13%)

Query: 130  LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            LWD+K  ++    +            H  +  +Y                  +++ SG  
Sbjct: 988  LWDIKTGQEKAKLQ-----------GH--AATVYSLCFSP-----------DDTLASGSG 1023

Query: 190  KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             + +C+ D             D  +    FSP+   +A  + D      + L D +    
Sbjct: 1024 DSYICLWDVKTVKQNKSLNGHDNYVLSVCFSPDGTSLASGSADS----SICLWDVKTGIQ 1079

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISAS 308
              R+      + A  FS +G          +   I   D+Q+     +L        S  
Sbjct: 1080 KARLVGHSEWVQAVCFSPDGTILA---SGSDDKSICLWDIQALKQKGQLHGHTSSVSSVC 1136

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SP    +   S       + +   N   Q    +         ++SP GD +A   F  
Sbjct: 1137 FSPVGYTLASGSQ---DNSICLWDFNTKQQYGKLEGHTNYIQSIMFSPDGDTLASCGFD- 1192

Query: 369  EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +   +  +K    + +L      +   ++SP G  L       G     +   D+  + +
Sbjct: 1193 KSIRLWDVKTRYQKAKLEGHSGWIYTLSFSPDGTILA-----SGSDDRSICLWDVQAKQQ 1247

Query: 429  T 429
             
Sbjct: 1248 K 1248



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/316 (15%), Positives = 99/316 (31%), Gaps = 45/316 (14%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
               G        RLW+VK  +Q       +         H+I                  
Sbjct: 769  STLGSGSADHSIRLWNVKTGQQKGKLDGHTGT------VHSIC----------------- 805

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                  ++ SG    S+ + D      +        I++   FSP+   +A  + D+   
Sbjct: 806  FSLDGFTLGSGSADTSIRLWDIKTGQQKAKLDGHTSIVYSVCFSPDGNILASGSDDN--- 862

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              +   D    +   ++   R    A  FS +      S  +D  + ++ +  +     +
Sbjct: 863  -SIRAWDVNTGQQKAKLNGHR----AVCFSPDNHTMAFS-NEDNFIRLWDIKAEQENA-Q 915

Query: 297  LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            L +     +S  +SPD + +   SD      + +       QK       ++ +   +S 
Sbjct: 916  LGSHNNYVLSLCFSPDGTILASGSD---DRSICLWDVQTKQQKAKLDGHTSTVYSVCFST 972

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDT 414
             G  +A          I +      QE+  ++       +  +SP            GD+
Sbjct: 973  DGATLASGSADNS---ILLWDIKTGQEKAKLQGHAATVYSLCFSPDDT----LASGSGDS 1025

Query: 415  GSKLYSIDLNGRNETL 430
               L+ +    +N++L
Sbjct: 1026 YICLWDVKTVKQNKSL 1041



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 76/227 (33%), Gaps = 23/227 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y     D  +    FSP+   +   + D      + L + +  +   ++      + +  
Sbjct: 750 YKIDGHDDKVLSVYFSPDGSTLGSGSADH----SIRLWNVKTGQQKGKLDGHTGTVHSIC 805

Query: 265 FSSNGKRALISV-QKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDR 322
           FS +G     ++        I   D+++   + +L     I  S  +SPD + +   SD 
Sbjct: 806 FSLDG----FTLGSGSADTSIRLWDIKTGQQKAKLDGHTSIVYSVCFSPDGNILASGSD- 860

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                +     N   QK     K   +    +SP    +AF         +  +K +   
Sbjct: 861 --DNSIRAWDVNTGQQK----AKLNGHRAVCFSPDNHTMAF-SNEDNFIRLWDIKAEQEN 913

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            +L   ++ + +  +SP G  L       G     +   D+  + + 
Sbjct: 914 AQLGSHNNYVLSLCFSPDGTILA-----SGSDDRSICLWDVQTKQQK 955



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 80/261 (30%), Gaps = 15/261 (5%)

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            V  ++ SG   NS+C+ D +              +    FSP+   +A   +D      +
Sbjct: 1140 VGYTLASGSQDNSICLWDFNTKQQYGKLEGHTNYIQSIMFSPDGDTLASCGFDK----SI 1195

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLT 298
             L D +      ++      I    FS +G          +   I   D+Q+   + +L 
Sbjct: 1196 RLWDVKTRYQKAKLEGHSGWIYTLSFSPDGTILA---SGSDDRSICLWDVQAKQQKAKLD 1252

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   S  +S D + +   S       +         +K        + +   +SP  
Sbjct: 1253 GHTSTVYSVCFSTDGATLASGS---ADNYIRFWDIKTGLEKAKLVGHANTLYSVSFSPDA 1309

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +I  +  +     +  ++ +  ++ L          T SP+   L        D    L
Sbjct: 1310 -MILASGSADNTIRLWNVQSEYEKQNLDARRERCHQVTISPNQAMLASGSY---DNSISL 1365

Query: 419  YSIDLNGRNETLINTPAYASD 439
            + +    +N  L+        
Sbjct: 1366 WDVKTGIQNAKLVGHSQQVQS 1386



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 92/248 (37%), Gaps = 27/248 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG   NS+ + D              Q +    FSP+   +A  + D     +++L D +
Sbjct: 1356 SGSYDNSISLWDVKTGIQNAKLVGHSQQVQSLCFSPDSTLLASGSDDK----QIFLWDVQ 1411

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
            I +   +     S + +  FS +G   L S  KD +  ++  D++++     L     + 
Sbjct: 1412 IRQQKAKFYGHVSTVYSVCFSPDGSTLL-SGSKDYSFYLW--DVKTSQQRATLDCHKAL- 1467

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
                +SPDS+ + +    +G   L+ +  +    K I            +SP G+ IA  
Sbjct: 1468 ---CFSPDSNTLAYGIY-DGSILLWNVIQSRQTAKLI--GHTNYIQSLCFSPDGNRIASG 1521

Query: 365  KFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    I +      Q +  L+   + + +  +S  G  L       G   + ++  D
Sbjct: 1522 SRDNS---INLWHGKTGQLQAKLIGHSNWIYSICFSLDGSQLA-----SGSYDNSIHLWD 1573

Query: 423  LNGRNETL 430
            +  RN  L
Sbjct: 1574 V--RNRQL 1579



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 82/285 (28%), Gaps = 41/285 (14%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                      LWDVK    I   K        + +  +    +  S + +K  F   +  
Sbjct: 1355 ASGSYDNSISLWDVKTG--IQNAKLVGHSQQVQSLCFSPDSTLLASGSDDKQIFLWDVQI 1412

Query: 180  VSESVV---------------------SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
              +                        SG    S  + D   +  R        +     
Sbjct: 1413 RQQKAKFYGHVSTVYSVCFSPDGSTLLSGSKDYSFYLWDVKTSQQRATLDCHKALC---- 1468

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+   +AY  YD      + L +    R   ++    + I +  FS +G R   S  +
Sbjct: 1469 FSPDSNTLAYGIYDG----SILLWNVIQSRQTAKLIGHTNYIQSLCFSPDGNRIA-SGSR 1523

Query: 279  DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D +++++    ++   + +L        S  +S D SQ+   S       +++       
Sbjct: 1524 DNSINLW--HGKTGQLQAKLIGHSNWIYSICFSLDGSQLASGSY---DNSIHLWDVRNRQ 1578

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             K   +          +S     +A          I V      +
Sbjct: 1579 LKVKLEGHNNCCSSLCFSSDSTTLASGSVDNS---IRVWNLKTGE 1620



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 77/226 (34%), Gaps = 40/226 (17%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G  +  G       F LWDVK  +Q                    + D ++++       
Sbjct: 1435 GSTLLSGSKDY--SFYLWDVKTSQQ------------------RATLDCHKALCFSPD-- 1472

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                   S ++  GI   S+ + +   +            +    FSP+  ++A  + D+
Sbjct: 1473 -------SNTLAYGIYDGSILLWNVIQSRQTAKLIGHTNYIQSLCFSPDGNRIASGSRDN 1525

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + L   +  +   ++    + I +  FS +G +   S   D ++ ++  D+++  
Sbjct: 1526 ----SINLWHGKTGQLQAKLIGHSNWIYSICFSLDGSQLA-SGSYDNSIHLW--DVRNRQ 1578

Query: 294  TE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             + +L        S  +S DS+ +   S       + V      +Q
Sbjct: 1579 LKVKLEGHNNCCSSLCFSSDSTTLASGSV---DNSIRVWNLKTGEQ 1621


>gi|325103670|ref|YP_004273324.1| WD40-like beta Propeller containing protein [Pedobacter saltans DSM
           12145]
 gi|324972518|gb|ADY51502.1| WD40-like beta Propeller containing protein [Pedobacter saltans DSM
           12145]
          Length = 676

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 79/267 (29%), Gaps = 67/267 (25%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA------------------- 229
            K+ L   + D  + + LT     I   P+ SP+ + + +                    
Sbjct: 98  KKDQLWACNTDYTDHKQLTDIEGGIE-NPKISPDGKSILFTKETLVIKTETKDIYEDLPK 156

Query: 230 ---------------TYDDEDILRVY-----------LMDTRIDRAPKRIGNFRSMILAP 263
                          T+++     +Y           + D   +                
Sbjct: 157 STAYVFNDLNYRHWDTWEEGKFSHIYTADFRDGKLENIKDIMENEPYDSPQKPFGGAEDV 216

Query: 264 RFSSNGKRALI--------SVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSS 314
            +S + K  L         +       DIY  ++ S  T  LT  +   +   S++   S
Sbjct: 217 IWSPDSKSILYVCKKKFGKAYATSTNTDIYEYNIASKKTVNLTEGMNGYDTHPSFNKSGS 276

Query: 315 QIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            + + S   +G    K  +YV+    + +  ++++ + +    +W+  G+ I F  ++  
Sbjct: 277 LLAWTSMSEDGYESDKNDIYVLDIKTNKKYNLTKEWDETVSGFIWAEDGNTIFFNAYNKG 336

Query: 370 KFAIGVMKK-------DGSQERLLVED 389
              +  +              R L   
Sbjct: 337 TQQVYALSLLKNLDKNSTKNIRQLTSG 363



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 65/195 (33%), Gaps = 21/195 (10%)

Query: 219 FSPNQQKVAYA-------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +SP+ + + Y         Y       +Y  +    +              P F+ +G  
Sbjct: 218 WSPDSKSILYVCKKKFGKAYATSTNTDIYEYNIASKKTVNLTEGMNGYDTHPSFNKSGSL 277

Query: 272 ALI-SVQKDEA----MDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGK 325
               S+ +D       DIY +D+++N    LT      +S   ++ D + I F +  +G 
Sbjct: 278 LAWTSMSEDGYESDKNDIYVLDIKTNKKYNLTKEWDETVSGFIWAEDGNTIFFNAYNKGT 337

Query: 326 EQLYVMQS-------NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           +Q+Y +         +  + ++++  K       +      LI           +  +  
Sbjct: 338 QQVYALSLLKNLDKNSTKNIRQLTSGK-WDINALLGQIDNSLIVSRTDMNHSAELFTLDI 396

Query: 379 DGSQERLLVEDSNLQ 393
              +   L   ++ +
Sbjct: 397 KTGRLNQLTHVNDDE 411



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 92/285 (32%), Gaps = 77/285 (27%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------- 274
           NQ ++ Y   D     +++  +T      K++ +    I  P+ S +GK  L        
Sbjct: 90  NQNRIIYLKKD-----QLWACNTDYTDH-KQLTDIEGGIENPKISPDGKSILFTKETLVI 143

Query: 275 ----------------------------SVQKDEAMDIYSVDLQSNATERLTNTLFIN-- 304
                                       + ++ +   IY+ D +    E + + +     
Sbjct: 144 KTETKDIYEDLPKSTAYVFNDLNYRHWDTWEEGKFSHIYTADFRDGKLENIKDIMENEPY 203

Query: 305 ISAS----------YSPDSSQIVFE--------SDREGKEQLYVMQSNGSDQKRISQDKE 346
            S            +SPDS  I++                 +Y           +++   
Sbjct: 204 DSPQKPFGGAEDVIWSPDSKSILYVCKKKFGKAYATSTNTDIYEYNIASKKTVNLTEGMN 263

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSP 399
                P ++  G L+A+T  S + +      I V+    +++  L +  D  +    W+ 
Sbjct: 264 GYDTHPSFNKSGSLLAWTSMSEDGYESDKNDIYVLDIKTNKKYNLTKEWDETVSGFIWAE 323

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL-------NGRNETLINTPAYA 437
            G ++ F+    G    ++Y++ L       + +N   + +  + 
Sbjct: 324 DGNTIFFNAYNKGTQ--QVYALSLLKNLDKNSTKNIRQLTSGKWD 366


>gi|153864438|ref|ZP_01997341.1| WD-40 repeat protein [Beggiatoa sp. SS]
 gi|152146068|gb|EDN72660.1| WD-40 repeat protein [Beggiatoa sp. SS]
          Length = 175

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 10/168 (5%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +       +    +   +++I +  FS +G R   S   D  + ++ V+      + LT 
Sbjct: 4   WGQTGISGKIVHTLTGHQNIINSVSFSPDGTRLA-SGSADNTIKLWEVN-TGKLLQTLTG 61

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                +S ++SPD   +   S       + V        +   +         ++SP G 
Sbjct: 62  HQKDVLSVAFSPDGKTLASGS---ADTSIKVWDIERGKTQHTLKQHNNWVLSVIFSPDGR 118

Query: 360 LIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLI 405
            I  + +      I    ++ G   + L   ++++ +  +SP GR L 
Sbjct: 119 YITSSSYD---HTIRFWDREAGKMLQTLTGHENHVNSIAFSPDGRLLA 163



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 57/165 (34%), Gaps = 9/165 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I +       I+    FSP+  ++A  + D+     + L +    +  + +   +  +L+
Sbjct: 13  IVHTLTGHQNIINSVSFSPDGTRLASGSADN----TIKLWEVNTGKLLQTLTGHQKDVLS 68

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             FS +GK    S   D ++ ++ ++ +      L       +S  +SPD   I   S  
Sbjct: 69  VAFSPDGKTLA-SGSADTSIKVWDIE-RGKTQHTLKQHNNWVLSVIFSPDGRYITSSSY- 125

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
                +           +     E       +SP G L+A     
Sbjct: 126 --DHTIRFWDREAGKMLQTLTGHENHVNSIAFSPDGRLLASGSRD 168



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 42/125 (33%), Gaps = 8/125 (6%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +       LT    I  S S+SPD +++   S       + + + N     +     +  
Sbjct: 9   ISGKIVHTLTGHQNIINSVSFSPDGTRLASGS---ADNTIKLWEVNTGKLLQTLTGHQKD 65

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIF 406
                +SP G  +A          I V   +  + +  ++  N    +  +SP GR +  
Sbjct: 66  VLSVAFSPDGKTLASGSADTS---IKVWDIERGKTQHTLKQHNNWVLSVIFSPDGRYITS 122

Query: 407 SRKKD 411
           S    
Sbjct: 123 SSYDH 127



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 56/169 (33%), Gaps = 28/169 (16%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            +          +LW+V   K +  +           +A   S D               
Sbjct: 34  TRLASGSADNTIKLWEVNTGKLL--QTLTGHQKDVLSVA--FSPD--------------- 74

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                +++ SG    S+ V D +    ++     +  +    FSP+ + +  ++YD    
Sbjct: 75  ----GKTLASGSADTSIKVWDIERGKTQHTLKQHNNWVLSVIFSPDGRYITSSSYDH--- 127

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             +   D    +  + +    + + +  FS +G+    S  +D  + I+
Sbjct: 128 -TIRFWDREAGKMLQTLTGHENHVNSIAFSPDGRLLA-SGSRDLTIKIW 174


>gi|319426562|gb|ADV54636.1| WD40 domain protein beta Propeller [Shewanella putrefaciens 200]
          Length = 683

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 89/292 (30%), Gaps = 69/292 (23%)

Query: 218 RFSPNQQKVAY----ATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             S +  K+ Y         E    +YL+D T+ +  P ++ +         F+S+ K  
Sbjct: 42  TVSHDGTKLVYGLKTVNEKGEASSDLYLLDLTQANAKPLQLTSAAGTEHDVSFASDDKSI 101

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------------- 317
                ++ +  ++ + L      ++++      S   S D  QIV               
Sbjct: 102 YFLASRNGSSQLFQLPLTGGEAVQVSDLPLDIDSYKLSNDGKQIVLSMRVFPECKDLACS 161

Query: 318 ---FESDREGK----------------------EQLYVMQSNGSDQKRISQDKEASYFDP 352
              F ++ E K                        L+V   NG    ++    +    + 
Sbjct: 162 KDKFTAESERKSTGREYKQLMVRHWDTWEDHARNHLFVGALNGEKLTKVVDITQGLDTET 221

Query: 353 -----------VWSPQGDLIAFTKFSG-------EKFAIGVMKKDGSQERLLVEDSNLQA 394
                       ++P G  + ++  +          + +  +   G     L +D+    
Sbjct: 222 PPKPFSGMEEVTFTPDGKYVVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWD 281

Query: 395 --PTWSPSGRSLIFSRKKDGDTGSKLYSI---DLNGRNETLINTPAYASDPQ 441
             PT+S  GR + +   K     +  Y+I   D N      +  P +   P 
Sbjct: 282 AQPTFSSDGRYMAYLAMKKPGFEADRYAIMLRDTNTGQSKEVA-PLWDRSPS 332



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/337 (12%), Positives = 110/337 (32%), Gaps = 80/337 (23%)

Query: 175 SRILFVSESVV-SGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
           +++++  ++V   G   + L ++D   AN + L   S      +  F+ + + + +    
Sbjct: 48  TKLVYGLKTVNEKGEASSDLYLLDLTQANAKPLQLTSAAGTEHDVSFASDDKSIYFLASR 107

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------- 277
           +                  ++ +    I + + S++GK+ ++S++               
Sbjct: 108 NGS--SQLFQLPLTGGEAVQVSDLPLDIDSYKLSNDGKQIVLSMRVFPECKDLACSKDKF 165

Query: 278 -------------------------KDEAMDIYSVDLQSNATER---LTNTLFINISA-- 307
                                          ++   L      +   +T  L        
Sbjct: 166 TAESERKSTGREYKQLMVRHWDTWEDHARNHLFVGALNGEKLTKVVDITQGLDTETPPKP 225

Query: 308 -------SYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQKRISQDKEASYFDPV 353
                  +++PD   +V+ +    K+Q +    +       G     +++D  A    P 
Sbjct: 226 FSGMEEVTFTPDGKYVVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPT 285

Query: 354 WSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLI 405
           +S  G  +A+       F  +++AI +   +  Q + +    + ++P+   + P  R+L 
Sbjct: 286 FSSDGRYMAYLAMKKPGFEADRYAIMLRDTNTGQSKEVAPLWD-RSPSSLMFGPDNRTLY 344

Query: 406 FSRKKDGDTG--------SKLYSIDLNGRNETLINTP 434
            + +  G             + SI  +G N  +  T 
Sbjct: 345 VTAQDMGQVSIFQINTQFGDVQSIYSDGTNSLIAVTN 381



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 63/184 (34%), Gaps = 8/184 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G +            +      L  +   G     LT        +P FS + 
Sbjct: 231 EVTFTPDGKYVVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPTFSSDG 290

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D   + L DT   ++ +    +     +  F  + +   ++ Q  
Sbjct: 291 RYMAYLAMKKPGFEADRYAIMLRDTNTGQSKEVAPLWDRSPSSLMFGPDNRTLYVTAQDM 350

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
             + I+ ++ Q    + +        ++  +  + Q++F+S    +   LY + ++G   
Sbjct: 351 GQVSIFQINTQFGDVQSI---YSDGTNSLIAVTNDQLIFDSKTLVEPGDLYSITTDGQGL 407

Query: 339 KRIS 342
           KR++
Sbjct: 408 KRLT 411


>gi|254425808|ref|ZP_05039525.1| hypothetical protein S7335_375 [Synechococcus sp. PCC 7335]
 gi|196188231|gb|EDX83196.1| hypothetical protein S7335_375 [Synechococcus sp. PCC 7335]
          Length = 1181

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 54/329 (16%), Positives = 104/329 (31%), Gaps = 42/329 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY---------- 163
           G+++  G     V  RLWDVK++  I    F       R +A +    +           
Sbjct: 656 GQLLASGSGDSTV--RLWDVKNKTCI--HVFEGHMDGVRTVAFSHDSKLLASGSEDCSVR 711

Query: 164 ----------QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
                        TGEK  F +         ++G     + + D +     +        
Sbjct: 712 VWNVEERLCLYKFTGEKNCFWAVAFSPDGKFIAGSENYLIRLWDIERQECAHTFEGHRNW 771

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++   FSP+ + +A  + D      V L D +  +  + +    S I +  FS  G+  +
Sbjct: 772 IWAVAFSPDGRFMATGSADT----TVRLWDVQRQQCEQVLEGHNSWIQSVHFSPEGRNLV 827

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQ 332
            S   D  + ++     S     +       + S ++SPDS  +   S  E    + +  
Sbjct: 828 -SASNDGTIRLWE--THSGKCVHVFEGYTNGVLSVTFSPDSMLVA--SGSEETNLVRLWD 882

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                   + +      +   +S  G  +A          I +      +     E    
Sbjct: 883 IQRCQCVHLFEGHTKWVWSVAFSSDGKFLATGSADTT---IRLWNISNKECVFTFEGHTN 939

Query: 393 Q--APTWSPSGRSLIFSRKKDGDTGSKLY 419
              +  + PS   L  S +   D   +L+
Sbjct: 940 WVRSVAFDPSSHYLASSSE---DATVRLW 965



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 80/252 (31%), Gaps = 20/252 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G    ++ + +       +        +    F P+   +A ++ D      V L    
Sbjct: 913  TGSADTTIRLWNISNKECVFTFEGHTNWVRSVAFDPSSHYLASSSEDA----TVRLWHLH 968

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN- 304
                        S + +  FS +G     S   D  + ++ V   S      T     N 
Sbjct: 969  NRECIHVFEGHTSWVRSAVFSPDGNCLA-SASNDGTIRLWDV---SKLQCIHTFEGHTNG 1024

Query: 305  -ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              S ++SPD     F +       + +     +   ++ +      +   +SP G L+A 
Sbjct: 1025 VWSVAFSPDGQ---FLASGSADNTVRLWNLRTNQCVQVFEGHTNWVWPVAFSPDGQLLAS 1081

Query: 364  TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                         K  G   R+L    S +++  +S     L+ S   DG    ++++  
Sbjct: 1082 GSADATVRLWNFQK--GKYTRILRGHTSGVRSIHFSSDSLYLV-SGSHDGT--IRIWNT- 1135

Query: 423  LNGRNETLINTP 434
              G    L  +P
Sbjct: 1136 QTGTQLNLFQSP 1147



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/300 (17%), Positives = 94/300 (31%), Gaps = 51/300 (17%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             +LW V++R+Q+    F       R +A        Q +    GD   R+  V      
Sbjct: 583 NVQLWSVENRQQLA--TFKGHANWIRSVAF---SPNGQLLASSSGDSTVRLWDVKNKT-- 635

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                             ++       +    FSPN Q +A  + D      V L D + 
Sbjct: 636 ----------------CIHVFEGHMDGVRTVAFSPNGQLLASGSGDS----TVRLWDVKN 675

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-----TNTL 301
                        +    FS + K    S  +D ++ +++V       ERL     T   
Sbjct: 676 KTCIHVFEGHMDGVRTVAFSHDSKLLA-SGSEDCSVRVWNV------EERLCLYKFTGEK 728

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               + ++SPD   I           + +      +     +      +   +SP G  +
Sbjct: 729 NCFWAVAFSPDGKFIA----GSENYLIRLWDIERQECAHTFEGHRNWIWAVAFSPDGRFM 784

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLY 419
           A          + +      Q   ++E  N    +  +SP GR+L+ +     D   +L+
Sbjct: 785 ATGSADTT---VRLWDVQRQQCEQVLEGHNSWIQSVHFSPEGRNLVSASN---DGTIRLW 838



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 71/217 (32%), Gaps = 28/217 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--- 259
           I+         L+   +SPN+  +A           +  +        +++  F+     
Sbjct: 552 IQSSLTHTFHSLYTVAWSPNRNFLA-------TGDAIGNVQLWSVENRQQLATFKGHANW 604

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVF 318
           I +  FS NG+    S   D  + ++  D+++     +       +   ++SP+   +  
Sbjct: 605 IRSVAFSPNGQLLA-SSSGDSTVRLW--DVKNKTCIHVFEGHMDGVRTVAFSPNGQLLAS 661

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S   G   + +          + +          +S    L+A      E  ++ V   
Sbjct: 662 GS---GDSTVRLWDVKNKTCIHVFEGHMDGVRTVAFSHDSKLLA---SGSEDCSVRVWNV 715

Query: 379 DGSQERL-----LVEDSNLQAPTWSPSGRSLIFSRKK 410
              +ERL       E +   A  +SP G+ +  S   
Sbjct: 716 ---EERLCLYKFTGEKNCFWAVAFSPDGKFIAGSENY 749



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 56/174 (32%), Gaps = 30/174 (17%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             RLWDV   + I    F                 ++       G F            SG
Sbjct: 1004 IRLWDVSKLQCI--HTFEGHTNG-----------VWSVAFSPDGQFL----------ASG 1040

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               N++ + +        +       ++   FSP+ Q +A  + D      V L + +  
Sbjct: 1041 SADNTVRLWNLRTNQCVQVFEGHTNWVWPVAFSPDGQLLASGSAD----ATVRLWNFQKG 1096

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +  + +    S + +  FSS+    + S   D  + I+  + Q+     L  + 
Sbjct: 1097 KYTRILRGHTSGVRSIHFSSDSLYLV-SGSHDGTIRIW--NTQTGTQLNLFQSP 1147


>gi|113473984|ref|YP_720045.1| WD-40 repeat-containing serine/threonine protein kinase
           [Trichodesmium erythraeum IMS101]
 gi|110165032|gb|ABG49572.1| serine/threonine protein kinase with WD40 repeats [Trichodesmium
           erythraeum IMS101]
          Length = 692

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 53/269 (19%), Positives = 105/269 (39%), Gaps = 25/269 (9%)

Query: 184 VVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           V SG    S+ ++  R G N+  L+   D  ++    SP+ + +  A+ D      + + 
Sbjct: 415 VASGSTNGSIQLLHLRSGQNLGQLS-GHDGPIWSVAISPDGRTLVSASGDS----TLKIW 469

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +    R    +      +L+   S +G     SV KD+ + ++ ++        L   L 
Sbjct: 470 NLYTRRLKNTLSGHLQDVLSVAISPDGNTIA-SVSKDKTIKLWDIN-SGLLLYTLYGHLD 527

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +  S ++S D   +   S+ +G  +L+  + +G     + +      +    SP G  +A
Sbjct: 528 VVQSVAFSSDGKTLASGSN-DGTVKLWNWR-DGRLLSTL-KGHRKPVWSVAISPDGKTLA 584

Query: 363 FTKFSGEKFAIGVMKKDG-------SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
              +  +   +  +  +        SQ  L+     +Q+  +SP G +L      D D  
Sbjct: 585 SGSWD-KTIKLWEINNNSFQRVIRRSQRTLIGHSEKVQSLQFSPDGETLA---SGDFDGT 640

Query: 416 SKLYSIDLNGRNETLINTPAYAS---DPQ 441
            KL+ I   G   TL    A+ +   DP+
Sbjct: 641 IKLWQIKTGGLMGTLKGHSAWVNLTFDPR 669



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 81/224 (36%), Gaps = 28/224 (12%)

Query: 217 PRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           P +S    P+ + VA  + +      + L+  R  +   ++      I +   S +G+  
Sbjct: 402 PVWSITTSPDGRIVASGSTNG----SIQLLHLRSGQNLGQLSGHDGPIWSVAISPDGRTL 457

Query: 273 LISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           + S   D  + I+  +L +   +  L+  L   +S + SPD + I   S     + + + 
Sbjct: 458 V-SASGDSTLKIW--NLYTRRLKNTLSGHLQDVLSVAISPDGNTIASVSK---DKTIKLW 511

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             N                   +S  G  +A     G    +   + DG   RLL     
Sbjct: 512 DINSGLLLYTLYGHLDVVQSVAFSSDGKTLASGSNDGTV-KLWNWR-DG---RLLSTLKG 566

Query: 392 LQAPTW----SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            + P W    SP G++L        D   KL+ I+ N   + +I
Sbjct: 567 HRKPVWSVAISPDGKTLASGSW---DKTIKLWEIN-NNSFQRVI 606



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 91/261 (34%), Gaps = 19/261 (7%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRD 211
           ++ H  S      ++G  G   S  +       VS    ++L + +     ++       
Sbjct: 425 QLLHLRSGQNLGQLSGHDGPIWSVAISPDGRTLVSASGDSTLKIWNLYTRRLKNTLSGHL 484

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           Q +     SP+   +A  + D      + L D         +     ++ +  FSS+GK 
Sbjct: 485 QDVLSVAISPDGNTIASVSKDK----TIKLWDINSGLLLYTLYGHLDVVQSVAFSSDGKT 540

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S   D  + +++          L        S + SPD   +   S     + + + 
Sbjct: 541 LA-SGSNDGTVKLWN-WRDGRLLSTLKGHRKPVWSVAISPDGKTLASGS---WDKTIKLW 595

Query: 332 QSNGSDQKRISQDKEASYFDPV-------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + N +  +R+ +  + +            +SP G+ +A   F G    +  +K  G    
Sbjct: 596 EINNNSFQRVIRRSQRTLIGHSEKVQSLQFSPDGETLASGDFDGT-IKLWQIKTGGLMGT 654

Query: 385 LLVEDSNLQAPTWSPSGRSLI 405
           L    + +   T+ P G++LI
Sbjct: 655 LKGHSAWVNL-TFDPRGKTLI 674



 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 6/96 (6%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           Q Y    +     R         +    SP G ++A    +G    + +  + G     L
Sbjct: 381 QPYTGVGDKLSPLRTLATTSGPVWSITTSPDGRIVASGSTNGSIQLLHL--RSGQNLGQL 438

Query: 387 V-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              D  + +   SP GR+L+      GD+  K++++
Sbjct: 439 SGHDGPIWSVAISPDGRTLV---SASGDSTLKIWNL 471


>gi|115378689|ref|ZP_01465838.1| peptidase S9, prolyl oligopeptidase active site region [Stigmatella
           aurantiaca DW4/3-1]
 gi|115364310|gb|EAU63396.1| peptidase S9, prolyl oligopeptidase active site region [Stigmatella
           aurantiaca DW4/3-1]
          Length = 600

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 62/178 (34%), Gaps = 9/178 (5%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES 320
              FS + K+ L S       + YSV ++      LT +   +  A SY P   +I++  
Sbjct: 8   GASFSPDEKKILFSSNGSGIFNAYSVPVKGGTPTPLTQSKTDSTFAVSYFPKDERILYTR 67

Query: 321 DREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGD--LIAFTKFSGEKFAIGV 375
           D+ G E   LYV   +G + K ++           W    G    +   +     F +  
Sbjct: 68  DQGGNENSHLYVRGLDGKE-KDLTPGDNLKALFAGWKEDDGSAFYVLSNERDARFFDLYK 126

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                 +  LL ++  N      S   + +   + +     S +Y  D+  +    I 
Sbjct: 127 YGAKTYERTLLYQNEGNYMVAGISRDEKWIALGKAQT-TADSDIYLYDVAKKEHKHIT 183



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 78/225 (34%), Gaps = 17/225 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+++K+ +++     I   Y +  +         +      A  +    +R L +  
Sbjct: 10  SFSPDEKKILFSSNGSG-IFNAYSVPVKGGTPTPLTQSKTDSTFAVSYFPKDERILYTRD 68

Query: 278 KDEAMD--IYSVDLQSNATERLTNTLFINISASYS----PDSSQIVFESD-REGK-EQLY 329
           +    +  +Y   L     + LT     N+ A ++     D S     S+ R+ +   LY
Sbjct: 69  QGGNENSHLYVRGLDGK-EKDLT--PGDNLKALFAGWKEDDGSAFYVLSNERDARFFDLY 125

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVE 388
              +   ++  + Q+ E +Y     S     IA  K  +     I +      + + +  
Sbjct: 126 KYGAKTYERTLLYQN-EGNYMVAGISRDEKWIALGKAQTTADSDIYLYDVAKKEHKHITA 184

Query: 389 D---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
               +N     + P   +L F   +  +    +  +   G+ E +
Sbjct: 185 HEGIANHSVSEFDPDSTALYFLTDEGSEFSRVVRYVLATGKQEEV 229



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 15/153 (9%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            AS+SPD  +I+F S+  G    Y +   G     ++Q K  S F   + P+ + I +T+
Sbjct: 8   GASFSPDEKKILFSSNGSGIFNAYSVPVKGGTPTPLTQSKTDSTFAVSYFPKDERILYTR 67

Query: 366 FSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSP----SGRSLIFSRKKDGDTGSKLY 419
             G      + V   DG ++ L     +     ++      G +      +       LY
Sbjct: 68  DQGGNENSHLYVRGLDGKEKDLT--PGDNLKALFAGWKEDDGSAFYVLSNERDARFFDLY 125

Query: 420 SIDLNGRNETLINTP-------AYASDPQWVGF 445
                    TL+            + D +W+  
Sbjct: 126 KYGAKTYERTLLYQNEGNYMVAGISRDEKWIAL 158



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 58/220 (26%), Gaps = 6/220 (2%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            F   S         L          R L    +        S +++ +A          
Sbjct: 109 AFYVLSNERDARFFDLYKYGAKTY-ERTLLYQNEGNYMVAGISRDEKWIALGKAQTTADS 167

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALI-SVQKDEAMDIYSVDLQSNAT 294
            +YL D       K I     +       F  +       + +  E   +    L +   
Sbjct: 168 DIYLYDVAKKEH-KHITAHEGIANHSVSEFDPDSTALYFLTDEGSEFSRVVRYVLATGKQ 226

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           E +    +  +  S+S   +  V   + +G   + +       Q  + Q  E       +
Sbjct: 227 EEVERANWDILYTSFSKKGTYRVTAINEDGHTVIRLHNMKAGKQVVLPQIPEGGITSVSF 286

Query: 355 SPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVEDSNLQ 393
           +P    +AF          + V +    +   L    N +
Sbjct: 287 APSEKRMAFYHVGDRSPSNLYVYEFATGKATRLTHALNPE 326



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 59/203 (29%), Gaps = 35/203 (17%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS-----DDIYQS 165
           +  G+           +  L+DV  ++                  H++S           
Sbjct: 156 IALGKAQTTADS----DIYLYDVAKKEHKHITAHEGIAN------HSVSEFDPDSTALYF 205

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +T E  +F+  + +V  +     ++ +   +                      FS     
Sbjct: 206 LTDEGSEFSRVVRYVLATGKQEEVERANWDILYT------------------SFSKKGTY 247

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DI 284
              A  +D   + + L + +  +           I +  F+ + KR       D +  ++
Sbjct: 248 RVTAINEDGHTV-IRLHNMKAGKQVVLPQIPEGGITSVSFAPSEKRMAFYHVGDRSPSNL 306

Query: 285 YSVDLQSNATERLTNTLFINISA 307
           Y  +  +    RLT+ L   I  
Sbjct: 307 YVYEFATGKATRLTHALNPEIDP 329



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             ++ +  ++SP  + ++FS    G   +  YS+ + G   T + 
Sbjct: 2   ATTDFEGASFSPDEKKILFSSNGSGIFNA--YSVPVKGGTPTPLT 44


>gi|172038837|ref|YP_001805338.1| WD repeat-containing protein [Cyanothece sp. ATCC 51142]
 gi|171700291|gb|ACB53272.1| WD-repeat protein [Cyanothece sp. ATCC 51142]
          Length = 1174

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 80/230 (34%), Gaps = 18/230 (7%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + D  G N+     S    L    FSP+ Q +  A+ D    L       R   A   + 
Sbjct: 870  LWDLQG-NMVAKLSSHGDNLRSIAFSPDGQLLVTASRDKTAKLW-----NRQGDALATLR 923

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              +  +    FS +G+  + +   D+   ++  + Q      L           +SP+  
Sbjct: 924  GHQGDVRDASFSPDGQWIV-TASWDKTAKLW--NRQGQVLFTLQGHEESIRQVEFSPNGQ 980

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             I   SD +G  QL+     G     +   +E       +SP    +  T        + 
Sbjct: 981  IIATASD-DGTVQLWT--PQGKPLNTLRGHQEG-VLGVAFSPDSQRVV-TASKDSTLKLW 1035

Query: 375  VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              K + +   L   ++ + + ++SP G+ ++       D   +L++ D  
Sbjct: 1036 TTKGE-AIATLRGHETAVNSVSFSPDGQFIV---SGGNDGTIRLWTKDGT 1081



 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 91/246 (36%), Gaps = 25/246 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +        ++   ++SP+ Q +A A++D    L+++  D       + +   +  + +
Sbjct: 543 EQNRFNGHQDMVTRVKYSPDGQTLATASWD--KTLKIWAKD---GTLLQTLNGHQDAVWS 597

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             +S +G+  + S  +D+   ++ V         L           +SPDS ++      
Sbjct: 598 VNYSPDGQFLV-SASRDKTAKLWRV-ADGTKVATLDFNDDWVACVGFSPDSQRVA---TM 652

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                + +    G +     +   A      +SP+ +LIA     G      +    G  
Sbjct: 653 GWNGVVKLWNLQGKEILSF-KTHNAPVMAIHYSPKAELIATASRDGTA---KIWNLQGEA 708

Query: 383 ERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSI------DLNGRNETLINTPA 435
              L    +      +SP G++L+   K   D  +KL+ +       L G  ET + + A
Sbjct: 709 VATLRGHQDWVMYVNFSPDGQTLVTGSK---DKTAKLWDLQGRELATLEGHTET-VGSGA 764

Query: 436 YASDPQ 441
           ++ D Q
Sbjct: 765 FSRDGQ 770



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 87/246 (35%), Gaps = 27/246 (10%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ +     ++ + +R G  +  +       ++   F+   Q +A +  D    L    
Sbjct: 770 QTIATAGFDKTVRLWNRQGK-LLNVLRGHTDAVWGVNFNETGQILASSGEDGTVRLWNLN 828

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERL 297
              +  ++   +    +       S +G+              Y++    DLQ N   +L
Sbjct: 829 HALKSAQSLTILPEEDAAKADISLSPDGQLL-------GTAGRYTMGKLWDLQGNMVAKL 881

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           ++      S ++SPD   +V  + R+   +L+   +   D     +  +    D  +SP 
Sbjct: 882 SSHGDNLRSIAFSPDGQLLV-TASRDKTAKLW---NRQGDALATLRGHQGDVRDASFSPD 937

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDT 414
           G  I    +      +     +   + L     + ++     +SP+G+ +  +     D 
Sbjct: 938 GQWIVTASWDKTA-KLW----NRQGQVLFTLQGHEESIRQVEFSPNGQIIATASD---DG 989

Query: 415 GSKLYS 420
             +L++
Sbjct: 990 TVQLWT 995



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 122/356 (34%), Gaps = 68/356 (19%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--SESVVSGIIKNS 192
           D + ++      +   WR     ++D    +      D+ + + F   S+ V +      
Sbjct: 603 DGQFLVSASRDKTAKLWR-----VADGTKVATLDFNDDWVACVGFSPDSQRVATMGWNGV 657

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + +  G  I     + +  +    +SP  + +A A+ D     +++ +        + 
Sbjct: 658 VKLWNLQGKEI-LSFKTHNAPVMAIHYSPKAELIATASRD--GTAKIWNLQGEAVATLR- 713

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
               +  ++   FS +G+  + +  KD+   ++  DLQ      L        S ++S D
Sbjct: 714 --GHQDWVMYVNFSPDGQTLV-TGSKDKTAKLW--DLQGRELATLEGHTETVGSGAFSRD 768

Query: 313 SSQIV---F-------------------------------------ESDREGKEQLYVMQ 332
              I    F                                      S  +G  +L+ + 
Sbjct: 769 GQTIATAGFDKTVRLWNRQGKLLNVLRGHTDAVWGVNFNETGQILASSGEDGTVRLWNLN 828

Query: 333 SNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-VMKKDGSQERLLVED 389
                 + ++   +++A+  D   SP G L+     +  ++ +G +    G+    L   
Sbjct: 829 HALKSAQSLTILPEEDAAKADISLSPDGQLL----GTAGRYTMGKLWDLQGNMVAKLSSH 884

Query: 390 S-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             NL++  +SP G+ L+ + +   D  +KL++   +    TL        D  +  
Sbjct: 885 GDNLRSIAFSPDGQLLVTASR---DKTAKLWNRQGD-ALATLRGHQGDVRDASFSP 936


>gi|298246344|ref|ZP_06970150.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297553825|gb|EFH87690.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 531

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 71/237 (29%), Gaps = 43/237 (18%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y    +D I+   ++SP+ + +A A  D   I         +   P   G      +A  
Sbjct: 161 YTHKEKDSIIIGLQWSPDGKHIALAGNDVR-IWDATTGKNEVTYHPTGGGRTPVQNIA-- 217

Query: 265 FSSNG-KRALISVQKDEAMDIYSVDLQSNA-----TERLTNTLFIN-------------- 304
           ++ +G +R  ++       ++  +D  +         + T  +                 
Sbjct: 218 WAPDGSQRLAVATN-----NVQIIDANTGKALITGPNQSTAHIGNLLTSLLTPLTSHSAG 272

Query: 305 ----ISASYSPDSSQIVFE-------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                  ++SPD   I          S       + +  S      +      A  +  V
Sbjct: 273 TASITGLAWSPDGKYIASSLNDPISESQNPQDHPILIWDSKTGAVVKTLIGHTADAYHVV 332

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFS 407
           WSP G  +A    + ++  + V      Q    V       +    WSP  + L  S
Sbjct: 333 WSPDGKYLASFSQNWDE-TVRVWNAKTGQLVYTVHAVGYGTMNELAWSPDSQYLAVS 388



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 72/227 (31%), Gaps = 38/227 (16%)

Query: 218 RFSPNQQKVAYATYDD------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +SP+ + +A +  D            + + D++     K +    +      +S +GK 
Sbjct: 280 AWSPDGKYIASSLNDPISESQNPQDHPILIWDSKTGAVVKTLIGHTADAYHVVWSPDGKY 339

Query: 272 AL-ISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFE-SDREGKE- 326
               S   DE + ++  + ++       + +        ++SPDS  +    S + G   
Sbjct: 340 LASFSQNWDETVRVW--NAKTGQLVYTVHAVGYGTMNELAWSPDSQYLAVSMSVQIGNNT 397

Query: 327 --------QLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIA--------FTKFSG 368
                   Q+ + Q+              +       WS  G  IA         +  S 
Sbjct: 398 VGEIKNKYQVQIWQALTGKPVLTYTLHSPNDIVQYLAWSHDGTRIATVENETQTISSGSN 457

Query: 369 EKFAIGVMKKD----GSQERLLV---EDSNLQAPTWSPSGRSLIFSR 408
           +   I V   +     + + L        +++  TWSP    +  + 
Sbjct: 458 KGQQIVVNNVEIWNPLTGKTLFTYQERSGDMRVVTWSPDDTLIATAS 504



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 60/201 (29%), Gaps = 27/201 (13%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D     +           +   +SP+ + +A  + + ++ +RV+   T        
Sbjct: 307 ILIWDSKTGAVVKTLIGHTADAYHVVWSPDGKYLASFSQNWDETVRVWNAKTGQLVYTVH 366

Query: 253 IGNFRSMILAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERLTNTL 301
              + +M     +S + +   +S+            K++        L        T   
Sbjct: 367 AVGYGTMNEL-AWSPDSQYLAVSMSVQIGNNTVGEIKNKYQVQIWQALTGKPVLTYTLHS 425

Query: 302 FINI--SASYSPDSSQIV--------FESDREGKEQLYV-----MQSNGSDQKRISQDKE 346
             +I    ++S D ++I           S     +Q+ V                 Q++ 
Sbjct: 426 PNDIVQYLAWSHDGTRIATVENETQTISSGSNKGQQIVVNNVEIWNPLTGKTLFTYQERS 485

Query: 347 ASYFDPVWSPQGDLIAFTKFS 367
                  WSP   LIA    S
Sbjct: 486 GDMRVVTWSPDDTLIATASMS 506


>gi|196232402|ref|ZP_03131255.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
 gi|196223474|gb|EDY17991.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
          Length = 1228

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 78/259 (30%), Gaps = 21/259 (8%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++ ++D             +  +   RFS +   +  A  D       Y           
Sbjct: 174 TVQLLDATTREPVRTIEGVEGKVNALRFSKDGSMLFAAAGDPGIGGIAYQWKVADGSLVH 233

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +    +  + A   S +G+    +   D+ + +++V         LT       + S+ P
Sbjct: 234 KFEGHKDALYALALSPDGQTLA-TGSYDQKIKLWNV-ADGKEIRTLTGHNGGVNALSFRP 291

Query: 312 DSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-- 368
           D   +   S DR     + +       +               +SP G  +         
Sbjct: 292 DGKVLASASVDRT----VKLWDMAEGKRLDTLSQPLKEQSAVAFSPDGKTLVAGGADNRI 347

Query: 369 EKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             + +    ++GS   L      +  +    +SP G+ L+       D   K+++   + 
Sbjct: 348 RVWKVSDQAEEGSNPLLYTRFAHEGAILNLAYSPDGKQLV---STAADRTVKVWNA-ADV 403

Query: 426 RNETLINTPAYASDPQWVG 444
             + L+ T      P W  
Sbjct: 404 TEQLLLET-----QPDWSP 417



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 75/214 (35%), Gaps = 31/214 (14%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           + +  S   K  L  +  DG  IR LT     +     F P+ + +A A+ D      V 
Sbjct: 253 TLATGSYDQKIKLWNV-ADGKEIRTLTGHNGGVNAL-SFRPDGKVLASASVDR----TVK 306

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERL 297
           L D    +    +        A  FS +GK  + +   D  + ++ V  Q    +     
Sbjct: 307 LWDMAEGKRLDTLSQPLKEQSAVAFSPDGKTLV-AGGADNRIRVWKVSDQAEEGSNPLLY 365

Query: 298 TN--TLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           T        ++ +YSPD  Q+V   +DR     + V  +    ++ + +        P W
Sbjct: 366 TRFAHEGAILNLAYSPDGKQLVSTAADRT----VKVWNAADVTEQLLLE------TQPDW 415

Query: 355 SP-----QGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           SP      G ++A  +  G    +        + 
Sbjct: 416 SPGLTLLDGGILALGRLDGS---LAFYNSTTGKP 446


>gi|310820170|ref|YP_003952528.1| peptidase, s9 prolyl oligopeptidase [Stigmatella aurantiaca
           DW4/3-1]
 gi|309393242|gb|ADO70701.1| Peptidase, S9 prolyl oligopeptidase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 645

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 62/178 (34%), Gaps = 9/178 (5%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES 320
              FS + K+ L S       + YSV ++      LT +   +  A SY P   +I++  
Sbjct: 53  GASFSPDEKKILFSSNGSGIFNAYSVPVKGGTPTPLTQSKTDSTFAVSYFPKDERILYTR 112

Query: 321 DREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGD--LIAFTKFSGEKFAIGV 375
           D+ G E   LYV   +G + K ++           W    G    +   +     F +  
Sbjct: 113 DQGGNENSHLYVRGLDGKE-KDLTPGDNLKALFAGWKEDDGSAFYVLSNERDARFFDLYK 171

Query: 376 MKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                 +  LL ++  N      S   + +   + +     S +Y  D+  +    I 
Sbjct: 172 YGAKTYERTLLYQNEGNYMVAGISRDEKWIALGKAQT-TADSDIYLYDVAKKEHKHIT 228



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 78/225 (34%), Gaps = 17/225 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+++K+ +++     I   Y +  +         +      A  +    +R L +  
Sbjct: 55  SFSPDEKKILFSSNGSG-IFNAYSVPVKGGTPTPLTQSKTDSTFAVSYFPKDERILYTRD 113

Query: 278 KDEAMD--IYSVDLQSNATERLTNTLFINISASYS----PDSSQIVFESD-REGK-EQLY 329
           +    +  +Y   L     + LT     N+ A ++     D S     S+ R+ +   LY
Sbjct: 114 QGGNENSHLYVRGLDGK-EKDLT--PGDNLKALFAGWKEDDGSAFYVLSNERDARFFDLY 170

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVE 388
              +   ++  + Q+ E +Y     S     IA  K  +     I +      + + +  
Sbjct: 171 KYGAKTYERTLLYQN-EGNYMVAGISRDEKWIALGKAQTTADSDIYLYDVAKKEHKHITA 229

Query: 389 D---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
               +N     + P   +L F   +  +    +  +   G+ E +
Sbjct: 230 HEGIANHSVSEFDPDSTALYFLTDEGSEFSRVVRYVLATGKQEEV 274



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 54/153 (35%), Gaps = 15/153 (9%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            AS+SPD  +I+F S+  G    Y +   G     ++Q K  S F   + P+ + I +T+
Sbjct: 53  GASFSPDEKKILFSSNGSGIFNAYSVPVKGGTPTPLTQSKTDSTFAVSYFPKDERILYTR 112

Query: 366 FSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSP----SGRSLIFSRKKDGDTGSKLY 419
             G      + V   DG ++ L     +     ++      G +      +       LY
Sbjct: 113 DQGGNENSHLYVRGLDGKEKDLT--PGDNLKALFAGWKEDDGSAFYVLSNERDARFFDLY 170

Query: 420 SIDLNGRNETLINTP-------AYASDPQWVGF 445
                    TL+            + D +W+  
Sbjct: 171 KYGAKTYERTLLYQNEGNYMVAGISRDEKWIAL 203



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 58/220 (26%), Gaps = 6/220 (2%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            F   S         L          R L    +        S +++ +A          
Sbjct: 154 AFYVLSNERDARFFDLYKYGAKTY-ERTLLYQNEGNYMVAGISRDEKWIALGKAQTTADS 212

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALI-SVQKDEAMDIYSVDLQSNAT 294
            +YL D       K I     +       F  +       + +  E   +    L +   
Sbjct: 213 DIYLYDVAKKEH-KHITAHEGIANHSVSEFDPDSTALYFLTDEGSEFSRVVRYVLATGKQ 271

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           E +    +  +  S+S   +  V   + +G   + +       Q  + Q  E       +
Sbjct: 272 EEVERANWDILYTSFSKKGTYRVTAINEDGHTVIRLHNMKAGKQVVLPQIPEGGITSVSF 331

Query: 355 SPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVEDSNLQ 393
           +P    +AF          + V +    +   L    N +
Sbjct: 332 APSEKRMAFYHVGDRSPSNLYVYEFATGKATRLTHALNPE 371



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 59/203 (29%), Gaps = 35/203 (17%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS-----DDIYQS 165
           +  G+           +  L+DV  ++                  H++S           
Sbjct: 201 IALGKAQTTADS----DIYLYDVAKKEHKHITAHEGIAN------HSVSEFDPDSTALYF 250

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +T E  +F+  + +V  +     ++ +   +                      FS     
Sbjct: 251 LTDEGSEFSRVVRYVLATGKQEEVERANWDILYT------------------SFSKKGTY 292

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DI 284
              A  +D   + + L + +  +           I +  F+ + KR       D +  ++
Sbjct: 293 RVTAINEDGHTV-IRLHNMKAGKQVVLPQIPEGGITSVSFAPSEKRMAFYHVGDRSPSNL 351

Query: 285 YSVDLQSNATERLTNTLFINISA 307
           Y  +  +    RLT+ L   I  
Sbjct: 352 YVYEFATGKATRLTHALNPEIDP 374



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             ++ +  ++SP  + ++FS    G   +  YS+ + G   T + 
Sbjct: 47  ATTDFEGASFSPDEKKILFSSNGSGIFNA--YSVPVKGGTPTPLT 89


>gi|302689407|ref|XP_003034383.1| hypothetical protein SCHCODRAFT_34278 [Schizophyllum commune H4-8]
 gi|300108078|gb|EFI99480.1| hypothetical protein SCHCODRAFT_34278 [Schizophyllum commune H4-8]
          Length = 830

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 60/329 (18%), Positives = 112/329 (34%), Gaps = 40/329 (12%)

Query: 107 GAQVLVT---GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
              V+V    G+ I  G     V  R+WDV   +Q+ G+                 D ++
Sbjct: 393 NVNVVVFSPDGKYIASGSADRTV--RVWDVASGQQV-GQPLRGHD-----------DHVW 438

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPN 222
                  G            +VSG    ++ V D   G  I       D  +     SPN
Sbjct: 439 TVAYSSDG----------RHLVSGSYDFAVRVWDAGTGQQIGATLQGHDASVMSVALSPN 488

Query: 223 QQKVAYATYDDE-DILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALISVQKD 279
            + +   + D    I    +++ R D  PK +        +    FS +GK    S   D
Sbjct: 489 AKSIVSGSEDRTIRIWDAPIIEHRGDDRPKPLSPAGHTDWVNCVAFSPDGKCIA-SGSID 547

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             + ++ V       + L          ++SPD+ +++  S  +G  +L+ +++ G+   
Sbjct: 548 CTVRLWDVATYHQIGQSLEGHTAQVNCVAFSPDNKRLLSGSS-DGSIRLWNVET-GAQSS 605

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           ++            +SP G LIA +      F +       + + L      +    +SP
Sbjct: 606 QVFDGHRGHILAVAYSPDGTLIA-SGSQDSTFRLWDATTGETVDELKGHGGGVACIGFSP 664

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            G+ +       G     +   D+  R +
Sbjct: 665 DGKLVA-----SGSQDHTICIWDVASRKQ 688



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 58/318 (18%), Positives = 97/318 (30%), Gaps = 54/318 (16%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
               +    RLWDV    QI G+      A    +A   S D  + +     D + R+  
Sbjct: 542 ASGSIDCTVRLWDVATYHQI-GQSLEGHTAQVNCVA--FSPD-NKRLLSGSSDGSIRLWN 597

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V                   GA    +       +    +SP+   +A  + D       
Sbjct: 598 VET-----------------GAQSSQVFDGHRGHILAVAYSPDGTLIASGSQDSTFR--- 637

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERL 297
            L D         +      +    FS +GK    S  +D  + I+  D+ S     E L
Sbjct: 638 -LWDATTGETVDELKGHGGGVACIGFSPDGKLVA-SGSQDHTICIW--DVASRKQLGESL 693

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--ISQDKEASYFDP--- 352
                   S ++SPD  QIV  S     + L V       Q    +++     +      
Sbjct: 694 AEHEASVTSIAFSPDGKQIVSGSH---DQTLRVWDVASRTQVGDALTEHDHGVFGAGDLV 750

Query: 353 -------VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ---ERLLVEDSNLQAPTWSPSGR 402
                   +S  G  I           I +   +  +   E L   D  + +   SP GR
Sbjct: 751 FGEVNSVAFSCDGKRIVSGSSDRT---IIIWDAETREPITEPLRGHDGLITSVALSPDGR 807

Query: 403 SLIFSRKKDGDTGSKLYS 420
           +++       D   +++S
Sbjct: 808 TIV---SGSADHTIRIWS 822



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 62/347 (17%), Positives = 120/347 (34%), Gaps = 49/347 (14%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW-----RKIAHTIS---DDIYQSI 166
            +I  GK   +V F      D  +I+ +    +   W     R+I  T     DD+    
Sbjct: 214 SLINAGKGAYQVMFS----PDGSRILSRLRDDTVRVWDADTGRQIGDTFVVKHDDVTLVC 269

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQK 225
               G            VVS    +++ V D + G  I     + D  +     S + + 
Sbjct: 270 LAHDG----------SQVVSCAKDHTIKVWDLNTGQQIGATVTTHDDWIECVALSSDGRH 319

Query: 226 VAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           +   ++D      V + D    RA  + +    + + +  FS +GK  L S   D  + +
Sbjct: 320 IVTGSHDR----TVRVWDALTGRAVGEALRGHTNNVTSAAFSPDGKHIL-SASWDRTIRL 374

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQ-SNGSDQKRIS 342
           + V     +               +SPD   I   S DR     + V   ++G    +  
Sbjct: 375 WEVVAVPKSVHTFNGHSDNVNVVVFSPDGKYIASGSADRT----VRVWDVASGQQVGQPL 430

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSP 399
           +  +   +   +S  G  +    +    FA+ V      Q+        D+++ +   SP
Sbjct: 431 RGHDDHVWTVAYSSDGRHLVSGSYD---FAVRVWDAGTGQQIGATLQGHDASVMSVALSP 487

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLINTPAYASDPQWV 443
           + +S++       D   +++   +    G +     +PA  +D  WV
Sbjct: 488 NAKSIV---SGSEDRTIRIWDAPIIEHRGDDRPKPLSPAGHTD--WV 529


>gi|170111430|ref|XP_001886919.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164638277|gb|EDR02556.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 515

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 105/337 (31%), Gaps = 57/337 (16%)

Query: 113 TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD----I 162
              V      R  V        R+WD +  + ++   F         +A   S D    +
Sbjct: 11  VTSVAFSPDGRYIVSGSHGKTVRVWDAQTGQSVM-HPFKGHDDWVTSVA--FSPDGRHIV 67

Query: 163 YQSITGEKGDFNSRILFVSESV---VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPR 218
             S+T +      R L    S    VSG    ++ V D + G ++ +     D  +    
Sbjct: 68  SASMTRQSECGMLRQLHFLLSGRHIVSGSHGKTVRVWDAQTGQDVIHPFKGHDDWVTSVA 127

Query: 219 FSPNQQKVAYATYDDE------------------------DILRVYLMDTRIDRAPKRIG 254
           FSP+ + +  A+ D                            +RV+   T  +     + 
Sbjct: 128 FSPDGRHIVSASDDKTVRVWDAQTGQNVMHPLKGHDDWVTSTVRVWDAQTGQNVM-HPLK 186

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPD 312
                + +  FS +G+  + S   D+ + ++  D Q+     + L        S ++S D
Sbjct: 187 GHDDCVTSVAFSPSGRHIV-SGSVDKTVRVW--DAQTGQDVMDILKGHDHYVTSVAFSSD 243

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKF 371
              IV  S     + + V  +        S    +       +S  G  I    +     
Sbjct: 244 GRHIVSGSC---DKTVRVWDAQTGQSDHASFKGHDHYVTSVAFSSDGRHIVSGSYDRT-- 298

Query: 372 AIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLI 405
            + V      Q  +     +     +  +SP GR ++
Sbjct: 299 -VRVWDAQTGQNVIDPVQGHNHYVTSVAFSPDGRHIV 334



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 55/309 (17%), Positives = 108/309 (34%), Gaps = 27/309 (8%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII----GKKFFSSPASWRKIAHTISDDIYQ 164
             L++GR I  G     V  R+WD +  + +I    G   + +  ++      I      
Sbjct: 84  HFLLSGRHIVSGSHGKTV--RVWDAQTGQDVIHPFKGHDDWVTSVAFSPDGRHIVSASDD 141

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQ 223
                      + +          + +++ V D + G N+ +     D  +    FSP+ 
Sbjct: 142 KTVRVWDAQTGQNVMHPLKGHDDWVTSTVRVWDAQTGQNVMHPLKGHDDCVTSVAFSPSG 201

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +   + D    +RV+   T  D      G+    + +  FSS+G+  + S   D+ + 
Sbjct: 202 RHIVSGSVD--KTVRVWDAQTGQDVMDILKGHDH-YVTSVAFSSDGRHIV-SGSCDKTVR 257

Query: 284 IYSVDLQSNATERLTN--TLFINISASYSPDSSQIVFES-DREGKEQLYVMQS-NGSDQK 339
           ++  D Q+  ++  +         S ++S D   IV  S DR     + V  +  G +  
Sbjct: 258 VW--DAQTGQSDHASFKGHDHYVTSVAFSSDGRHIVSGSYDRT----VRVWDAQTGQNVI 311

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APT 396
              Q          +SP G  I           + V      Q  +     +     +  
Sbjct: 312 DPVQGHNHYVTSVAFSPDGRHIVSGSIDKT---VRVWDAQTGQSIMDPLKGHEDCVTSVA 368

Query: 397 WSPSGRSLI 405
           +SP GR ++
Sbjct: 369 FSPDGRLIV 377



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 65/168 (38%), Gaps = 14/168 (8%)

Query: 175 SRILFVSESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           + + F S+    VSG    ++ V D + G +        D  +    FS + + +   +Y
Sbjct: 236 TSVAFSSDGRHIVSGSCDKTVRVWDAQTGQSDHASFKGHDHYVTSVAFSSDGRHIVSGSY 295

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D    +RV+   T  +     +      + +  FS +G+  + S   D+ + ++  D Q+
Sbjct: 296 D--RTVRVWDAQTGQN-VIDPVQGHNHYVTSVAFSPDGRHIV-SGSIDKTVRVW--DAQT 349

Query: 292 NA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                + L        S ++SPD   IV  SD    + + V  +    
Sbjct: 350 GQSIMDPLKGHEDCVTSVAFSPDGRLIVSGSD---DKTVRVWDAQTGQ 394



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 65/251 (25%), Gaps = 58/251 (23%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               D  +    FSP+ + +   +      +RV+   T               + +  FS
Sbjct: 4   LKGHDHHVTSVAFSPDGRYI--VSGSHGKTVRVWDAQTGQSVM-HPFKGHDDWVTSVAFS 60

Query: 267 SNGKRALISV-----------------------QKDEAMDIYSVDLQSNA--TERLTNTL 301
            +G+  + +                               +   D Q+            
Sbjct: 61  PDGRHIVSASMTRQSECGMLRQLHFLLSGRHIVSGSHGKTVRVWDAQTGQDVIHPFKGHD 120

Query: 302 FINISASYSPDSSQIVFESD----REGKEQ-------------------LYVMQS-NGSD 337
               S ++SPD   IV  SD    R    Q                   + V  +  G +
Sbjct: 121 DWVTSVAFSPDGRHIVSASDDKTVRVWDAQTGQNVMHPLKGHDDWVTSTVRVWDAQTGQN 180

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQA 394
                +  +       +SP G  I           + V      Q+    L   D  + +
Sbjct: 181 VMHPLKGHDDCVTSVAFSPSGRHIVSGSVDKT---VRVWDAQTGQDVMDILKGHDHYVTS 237

Query: 395 PTWSPSGRSLI 405
             +S  GR ++
Sbjct: 238 VAFSSDGRHIV 248



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 28/196 (14%)

Query: 121 KDRLRVEFRLWDVKDRKQII----GKKFFSSP----ASWRKIAHTISDDIY--------- 163
              +    R+WD +  + ++    G   + +     +  R I     D            
Sbjct: 206 SGSVDKTVRVWDAQTGQDVMDILKGHDHYVTSVAFSSDGRHIVSGSCDKTVRVWDAQTGQ 265

Query: 164 --QSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPR 218
              +       + + + F S+    VSG    ++ V D + G N+       +  +    
Sbjct: 266 SDHASFKGHDHYVTSVAFSSDGRHIVSGSYDRTVRVWDAQTGQNVIDPVQGHNHYVTSVA 325

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +   + D    +RV+   T         G     + +  FS +G R ++S   
Sbjct: 326 FSPDGRHIVSGSID--KTVRVWDAQTGQSIMDPLKG-HEDCVTSVAFSPDG-RLIVSGSD 381

Query: 279 DEAMDIYSVDLQSNAT 294
           D+ + ++  D Q+   
Sbjct: 382 DKTVRVW--DAQTGQI 395



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 44/156 (28%), Gaps = 30/156 (19%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQI 316
            + +  FS +G+  +          +   D Q+                S ++SPD   I
Sbjct: 10  HVTSVAFSPDGRYIV---SGSHGKTVRVWDAQTGQSVMHPFKGHDDWVTSVAFSPDGRHI 66

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           V  S           QS     +++                G  I           + V 
Sbjct: 67  VSAS--------MTRQSECGMLRQLHFLLS-----------GRHIVSGSHGKT---VRVW 104

Query: 377 KKDGSQERL-LVEDSNLQ--APTWSPSGRSLIFSRK 409
                Q+ +   +  +    +  +SP GR ++ +  
Sbjct: 105 DAQTGQDVIHPFKGHDDWVTSVAFSPDGRHIVSASD 140


>gi|271963214|ref|YP_003337410.1| hypothetical protein Sros_1676 [Streptosporangium roseum DSM 43021]
 gi|270506389|gb|ACZ84667.1| Uncharacterized protein related to the periplasmic component of the
           Tol biopolymer transport system-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 1051

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 65/175 (37%), Gaps = 22/175 (12%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            D+++         RL++          SPD++++ + S R+G  ++++        +R+
Sbjct: 23  DDVWAAPAAGGRAWRLSSDRAPAGHPHLSPDATKVAWTSVRDGAPEVFLADLESGSAERL 82

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERLLVEDSNLQAPTWS 398
           +   +       W+P G ++A    +G+ FA         DG  ERL        + T  
Sbjct: 83  TYWGDRRTRTRGWTPDGRVLA-ISATGQPFASRSWAYALGDGRVERLPYGPVTDLSVT-- 139

Query: 399 PSGRSLI------------FSRKKDGDTGSKLYSIDLNGRNETLIN-TPAYASDP 440
             G ++             + R + G  G +L+     G    L+     + + P
Sbjct: 140 --GDAVALLTASLARDPGTWKRYRGGTAG-RLWVQRAGGDFTRLLAEVNGHFASP 191



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 65/193 (33%), Gaps = 21/193 (10%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+ + R+    P  S +  +   +  +D A +++  DL+S + ERLT           ++
Sbjct: 37  RLSSDRAPAGHPHLSPDATKVAWTSVRDGAPEVFLADLESGSAERLTYWGDRRTRTRGWT 96

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----- 365
           PD   +   +   G+       +      R+ +       D   +     +         
Sbjct: 97  PDGRVLAISA--TGQPFASRSWAYALGDGRVERLPYGPVTDLSVTGDAVALLTASLARDP 154

Query: 366 ------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSK 417
                   G    + V +  G   RLL E +   A   SP   G  L+F    +G     
Sbjct: 155 GTWKRYRGGTAGRLWVQRAGGDFTRLLAEVNGHFA---SPMLVGGRLVFLSDHEG--VGN 209

Query: 418 LYSIDLNGRNETL 430
           LYS  L+G     
Sbjct: 210 LYSCALDGTGLRR 222



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 80/245 (32%), Gaps = 17/245 (6%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F  R   +S   ++ +  + +      G     L+  R      P  SP+  KVA+ +  
Sbjct: 5   FYLRFPHISRETLTFVADDDVWAAPAAGGRAWRLSSDRAP-AGHPHLSPDATKVAWTSVR 63

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQS 291
           D     V+L D     A +             ++ +G+   IS   +  A   ++  L  
Sbjct: 64  DG-APEVFLADLESGSAERLTYWGDRRTRTRGWTPDGRVLAISATGQPFASRSWAYALGD 122

Query: 292 NATERLTNTLFINIS----------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
              ERL      ++S          AS + D     ++  R G      +Q  G D  R+
Sbjct: 123 GRVERLPYGPVTDLSVTGDAVALLTASLARDPGT--WKRYRGGTAGRLWVQRAGGDFTRL 180

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
             +    +  P+    G  + F         +     DG+  R   +     A   +  G
Sbjct: 181 LAEVNGHFASPMLV--GGRLVFLSDHEGVGNLYSCALDGTGLRRHTDHDVFYARHATTDG 238

Query: 402 RSLIF 406
             +++
Sbjct: 239 TRIVY 243



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 57/326 (17%), Positives = 113/326 (34%), Gaps = 38/326 (11%)

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRD 199
           K++    A  R        D  + +    G F S +L     V         +L     D
Sbjct: 158 KRYRGGTAG-RLWVQRAGGDFTRLLAEVNGHFASPMLVGGRLVFLSDHEGVGNLYSCALD 216

Query: 200 GANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDE----------DILRVYLMDTRIDR 248
           G  +R      D  +F  R +  +  ++ Y    D             L V L      R
Sbjct: 217 GTGLR---RHTDHDVFYARHATTDGTRIVYQNAGDLYLLDDLDAETRKLDVTLGSPLRGR 273

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            P ++   R +       + G+ + + +Q      ++ +  +     +L+  L       
Sbjct: 274 QPYQVNAGRRLHDL-AVDATGRASAVEIQGS----VHWITHRDGPARQLSTGLSA-GKPR 327

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
               + ++V+  D   ++ L +  ++G + +RI+  K     D   +P G+ IA     G
Sbjct: 328 IL-GTDRVVWVFDDGERQGLEIGPASGGESRRIAAGKLGEVGDLAVAPDGNAIAVAARDG 386

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS--------RKKDGDTGSKLYS 420
               + V    G    L   +  ++   WSP    L +S        R +      ++ +
Sbjct: 387 RLLLVDV--ASGEVTELATANGEIEGLAWSPDSAWLAWSHPEATPLRRIRLARVMDRVVT 444

Query: 421 IDLNGRNETLINTPAYASDPQWVGFM 446
              +GR   +  +PA+A D  ++ F+
Sbjct: 445 DVTDGRF--VDVSPAFAGD--YLAFL 466



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 61/177 (34%), Gaps = 12/177 (6%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQL 328
            R +      E   +         + R+           + +PD + I   + R+G  +L
Sbjct: 332 DRVVWVFDDGERQGLEIGPASGGESRRIAAGKLGEVGDLAVAPDGNAIA-VAARDG--RL 388

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            ++     +   ++           WSP    +A++        +  ++     +R++ +
Sbjct: 389 LLVDVASGEVTELAT-ANGEIEGLAWSPDSAWLAWSHPEATP--LRRIRLARVMDRVVTD 445

Query: 389 DSNLQAPTWSP--SGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
            ++ +    SP  +G  L F  ++  D     +S D++   G    L+   A    P
Sbjct: 446 VTDGRFVDVSPAFAGDYLAFLSRRGFDPVYDAHSFDMSFPFGYRPYLVPLAAATPSP 502


>gi|298249108|ref|ZP_06972912.1| WD40 repeat containing protein [Ktedonobacter racemifer DSM 44963]
 gi|297547112|gb|EFH80979.1| WD40 repeat containing protein [Ktedonobacter racemifer DSM 44963]
          Length = 484

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 96/250 (38%), Gaps = 29/250 (11%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            R+    +  +SP+   +A A  D   +             P+      + I    +SS+
Sbjct: 229 DREVYATQVAWSPDGTHLASAIGDI-QVWDPLTGKLLTRYFPEVHTT--TTISQVAWSSD 285

Query: 269 GKRAL--I-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           G+       +      + I+  + ++ A  ++ +T  I+ + S+SP+   I   S   G 
Sbjct: 286 GQYLAGGYNTADSTGGVTIW--NARTGAVVKMLSTDQID-NISWSPNGKYITVTS---GD 339

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQE 383
           + +    ++      +      +  D  WSP    +A  K++ +    AI ++     + 
Sbjct: 340 KTVIRSTADWQSVLTL------NAPDISWSPDSTRLALHKYATKTSGEAIQIISIPTGKV 393

Query: 384 RLLVEDS-NLQAPTWSPSGRSLIFSRKK-----DGDTGSKLYSIDLNGRNETLINTPA-- 435
            L      +  A +WSP G+ ++F++ K     D  TG +L++ D           P   
Sbjct: 394 LLTYRSPEHTYALSWSPDGKRIVFAKNKAIEIWDSQTGERLFTYDGQHGTADRNAYPGSL 453

Query: 436 -YASDPQWVG 444
            ++ D +++ 
Sbjct: 454 CWSPDGKYIA 463



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 79/245 (32%), Gaps = 36/245 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI---------LAPRFSSN 268
           ++SP+ + +A A         V++ D         +    S               +S +
Sbjct: 184 KWSPDGKHLAVAAGPIR-YGSVHVWDALTGTHEVVLTPEPSTNQYVDREVYATQVAWSPD 242

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIV--F-ES 320
           G            + ++   L      R      T T    +  ++S D   +   +  +
Sbjct: 243 GTHLA---SAIGDIQVWD-PLTGKLLTRYFPEVHTTTTISQV--AWSSDGQYLAGGYNTA 296

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           D  G   ++  ++ G+  K +S D+  +     WSP G  I  T          V++   
Sbjct: 297 DSTGGVTIWNART-GAVVKMLSTDQIDNI---SWSPNGKYITVTSGDKT-----VIRSTA 347

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASD 439
             + +L  ++     +WSP    L   +     +G  +  I +  G+      +P +   
Sbjct: 348 DWQSVLTLNAPDI--SWSPDSTRLALHKYATKTSGEAIQIISIPTGKVLLTYRSPEHTYA 405

Query: 440 PQWVG 444
             W  
Sbjct: 406 LSWSP 410



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 41/128 (32%), Gaps = 15/128 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+  ++A   Y  +       + +                 A  +S +GKR + +  
Sbjct: 361 SWSPDSTRLALHKYATKTSGEAIQIISIPTGKVLLTYRSPEHTYALSWSPDGKRIVFAKN 420

Query: 278 K-------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----FESDREGKE 326
           K            +++ D Q    +R         S  +SPD   I     F S   G  
Sbjct: 421 KAIEIWDSQTGERLFTYDGQHGTADR----NAYPGSLCWSPDGKYIASSVIFASQIGGGG 476

Query: 327 QLYVMQSN 334
            + V Q+ 
Sbjct: 477 TIQVWQAE 484


>gi|284102434|ref|ZP_06386050.1| WD40 domain protein beta Propeller [Candidatus Poribacteria sp.
           WGA-A3]
 gi|283830315|gb|EFC34549.1| WD40 domain protein beta Propeller [Candidatus Poribacteria sp.
           WGA-A3]
          Length = 125

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 18/105 (17%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-------------- 369
           G  +L+VM ++GS +++++Q+  AS F P + P G  I F                    
Sbjct: 6   GNLELFVMNADGSGKQQVTQNG-ASNFAPYFHPDGHRIIFASSGPNAAEAKESAQSLSKG 64

Query: 370 --KFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              F + ++  DG+  E++ VE      P +SP+G+ L++   ++
Sbjct: 65  RPSFHLYLVNDDGTGLEQITVEGHFNSFPMFSPNGKLLVWVSDRN 109



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 51/118 (43%), Gaps = 21/118 (17%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--------------REGK 325
             ++++ ++   +  +++T     N +  + PD  +I+F S                +G+
Sbjct: 6   GNLELFVMNADGSGKQQVTQNGASNFAPYFHPDGHRIIFASSGPNAAEAKESAQSLSKGR 65

Query: 326 E--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG----EKFAIGVMK 377
               LY++  +G+  ++I+ +   + F P++SP G L+ +          +F + +  
Sbjct: 66  PSFHLYLVNDDGTGLEQITVEGHFNSF-PMFSPNGKLLVWVSDRNAKEKGEFNVFLAD 122



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 36/97 (37%), Gaps = 16/97 (16%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD----------------IYSVDLQ 290
               +++    +   AP F  +G R + +     A +                +Y V+  
Sbjct: 17  GSGKQQVTQNGASNFAPYFHPDGHRIIFASSGPNAAEAKESAQSLSKGRPSFHLYLVNDD 76

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
               E++T     N    +SP+   +V+ SDR  KE+
Sbjct: 77  GTGLEQITVEGHFNSFPMFSPNGKLLVWVSDRNAKEK 113



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 33/94 (35%), Gaps = 16/94 (17%)

Query: 367 SGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRK--------------KD 411
                 + VM  DGS ++ + ++  +  AP + P G  +IF+                  
Sbjct: 4   EPGNLELFVMNADGSGKQQVTQNGASNFAPYFHPDGHRIIFASSGPNAAEAKESAQSLSK 63

Query: 412 GDTGSKLYSIDLNGRNETLINTPA-YASDPQWVG 444
           G     LY ++ +G     I     + S P +  
Sbjct: 64  GRPSFHLYLVNDDGTGLEQITVEGHFNSFPMFSP 97



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 21/116 (18%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---------------EDI 236
            L VM+ DG+  + +T +     F P F P+  ++ +A+                     
Sbjct: 9   ELFVMNADGSGKQQVTQNGAS-NFAPYFHPDGHRIIFASSGPNAAEAKESAQSLSKGRPS 67

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD----EAMDIYSVD 288
             +YL++       ++I         P FS NGK  +    ++       +++  D
Sbjct: 68  FHLYLVNDDGTGL-EQITVEGHFNSFPMFSPNGKLLVWVSDRNAKEKGEFNVFLAD 122


>gi|108763358|ref|YP_629535.1| putative lipoprotein [Myxococcus xanthus DK 1622]
 gi|108467238|gb|ABF92423.1| putative lipoprotein [Myxococcus xanthus DK 1622]
          Length = 271

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 79/216 (36%), Gaps = 35/216 (16%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +++ + Y          + L+          +        AP  S +G R       D
Sbjct: 56  SADRRIIVY------QTTSLQLIRMDNQGDSHLVAERTG---APEVSLDGSRVAYVKLPD 106

Query: 280 E--------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-REGKEQLYV 330
                    + ++Y ++  S  + R+T   F +    ++PD   ++F+S  R G   L++
Sbjct: 107 GYREGDVVRSSELYVLNANSGRSVRVTQG-FDDSEPVWTPDGRNVLFQSTRRSGVPSLWL 165

Query: 331 MQSNGSDQKRISQDKEASYFDPV-----------WSPQGDLIAFTKFS---GEKFAIGVM 376
           ++ NG D K+++    + +               W     +I +T  S   GE   + V+
Sbjct: 166 VKENGKDLKQLTNAGTSQFSSAYIPNPALGGTVEWDADRRIIVYTTTSLRPGEDGEVRVI 225

Query: 377 KKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
             D + +            P W+  G  +++SR + 
Sbjct: 226 TFDRNYDVATAYSLGTGFGPVWTERGT-VVYSRNEG 260



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 45/132 (34%), Gaps = 14/132 (10%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEA-----SYFDPVWSPQGDLIAFTKFSGE----- 369
           S      ++ V Q+      R+    ++         P  S  G  +A+ K         
Sbjct: 53  SSESADRRIIVYQTTSLQLIRMDNQGDSHLVAERTGAPEVSLDGSRVAYVKLPDGYREGD 112

Query: 370 ---KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 + V+  +  +   + +  +   P W+P GR+++F   +       L+ +  NG+
Sbjct: 113 VVRSSELYVLNANSGRSVRVTQGFDDSEPVWTPDGRNVLFQSTRR-SGVPSLWLVKENGK 171

Query: 427 NETLINTPAYAS 438
           +   +     + 
Sbjct: 172 DLKQLTNAGTSQ 183



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 55/148 (37%), Gaps = 18/148 (12%)

Query: 175 SRILFVS----ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           SR+ +V           +  + L V++ +      +T   D    EP ++P+ + V + +
Sbjct: 97  SRVAYVKLPDGYREGDVVRSSELYVLNANSGRSVRVTQGFD--DSEPVWTPDGRNVLFQS 154

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN----GKRALISVQKDEAMDIYS 286
                +  ++L+     +  K++ N  +   +  +  N    G    +    D  + +Y+
Sbjct: 155 TRRSGVPSLWLVK-ENGKDLKQLTNAGTSQFSSAYIPNPALGGT---VEWDADRRIIVYT 210

Query: 287 V----DLQSNATERLTNTLFINISASYS 310
                  +      +T     +++ +YS
Sbjct: 211 TTSLRPGEDGEVRVITFDRNYDVATAYS 238



 Score = 36.5 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 12/96 (12%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KK 410
           S    +I +         +  M   G    +        AP  S  G  + + +     +
Sbjct: 56  SADRRIIVY---QTTSLQLIRMDNQGDSHLVAERTG---APEVSLDGSRVAYVKLPDGYR 109

Query: 411 DGD--TGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +GD    S+LY ++ N      +      S+P W  
Sbjct: 110 EGDVVRSSELYVLNANSGRSVRVTQGFDDSEPVWTP 145


>gi|298374623|ref|ZP_06984581.1| cytochrome c binding protein [Bacteroides sp. 3_1_19]
 gi|298268991|gb|EFI10646.1| cytochrome c binding protein [Bacteroides sp. 3_1_19]
          Length = 503

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 92/317 (29%), Gaps = 56/317 (17%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E G     I+ + +  +    +  +   D  G N          +        +  ++ +
Sbjct: 156 EPGYEKWHIVGIYQRNLESFDEQPIIRNDMTGYNC---------MNCHSFCMGDPGQMMF 206

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---------- 278
                     +           K  G   +M   P +  +G+    SV            
Sbjct: 207 HMRAANGGTYIVQDKKISKLNTKTNGTISNMTY-PFWHPSGRYITTSVNDIKQFFHSVKE 265

Query: 279 ------DEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFES--------- 320
                 D   D+   D+++        L          ++SPD   + F +         
Sbjct: 266 KKMEVFDLESDVVVYDVKNKEILSKASLITKDAFETFPAFSPDGKWLYFCTAPAQKMPEN 325

Query: 321 -DREGKEQLYV-MQSNGSDQK----RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            D+       V    +  +       +      SY  P  SP G  + +T+ +  +F I 
Sbjct: 326 YDKVRYNLCRVAFDPDRGEISFPIDTLVHADSLSYTFPRISPDGRFLMYTETAYGQFPIW 385

Query: 375 VMKKDGSQE----RLLVEDSNLQAP------TWSPSGRSLIFSRKKDGD--TGSKLYSID 422
               +        R  ++ S L +P      +WS +   ++FS ++D    T   +  I 
Sbjct: 386 HPDAEIRMMDLENRTAMDMSALNSPDTDSYHSWSSNSDWVVFSSRRDNGLYTLPYICHIG 445

Query: 423 LNGRNETLINTPAYASD 439
            +G+       P    D
Sbjct: 446 KDGKPSKPFLLPQEDPD 462


>gi|168700089|ref|ZP_02732366.1| hypothetical protein GobsU_11215 [Gemmata obscuriglobus UQM 2246]
          Length = 624

 Score = 73.1 bits (178), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 48/298 (16%), Positives = 98/298 (32%), Gaps = 64/298 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L + + DG N +     +++ L   + SP+ + +AY            L D      P +
Sbjct: 318 LVLSNPDGKNTKEFAL-KERFLPSVQLSPDGKTIAY---RHPPQRTAKLSDLLTKSEPLK 373

Query: 253 I-------------GNFRSMILAPRFSSNGKRALISVQKDE-----AMDIYSVDLQSNAT 294
           +              +      +  +S +G     S   DE           V ++S   
Sbjct: 374 LHLHVRALNDTGSGTDLGVECDSFVWSPDGTEIACSSVDDEPGRQPQATSLVVRVESKEK 433

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYF 350
             L       I+ S++PD   +     R    + K +LY++  +GS  K ++ D  A+  
Sbjct: 434 TELKLPPGHVIT-SWAPDGRFVTMRLTRTDPSDAKARLYLVNRDGSKHKALAPDTNATMG 492

Query: 351 DPVWSPQGDLI--------------------AFTKFSGEKFAIGVMKKDGSQERLLVE-- 388
               SP G  +                    A  +    + A+ ++     +   +    
Sbjct: 493 --RMSPDGTRVLCVLLKSAKETTAEKKKRQEAGAELPPPERALAILDIASGKVTKVANVP 550

Query: 389 ---DSNLQAPTWSPSGRSLIFSRKKDGDTGSK----------LYSIDLNGRNETLINT 433
              +       WSP G+ + ++ ++  + G +          L   D +G N T + +
Sbjct: 551 PNGEVQEHGLVWSPDGKRIAYTWRQKHEGGRQEATNKETEWRLIVCDADGTNVTTVAS 608



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 72/216 (33%), Gaps = 50/216 (23%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF---RSMILAPRFSSNGKRALIS 275
           +SP+  ++A ++ DDE   +       +    K           ++   ++ +G+   + 
Sbjct: 399 WSPDGTEIACSSVDDEPGRQPQATSLVVRVESKEKTELKLPPGHVIT-SWAPDGRFVTMR 457

Query: 276 VQK----DEAMDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFESDREGKEQ- 327
           + +    D    +Y V+   +  + L      + +A+    SPD ++++    +  KE  
Sbjct: 458 LTRTDPSDAKARLYLVNRDGSKHKAL----APDTNATMGRMSPDGTRVLCVLLKSAKETT 513

Query: 328 -------------------LYVMQSNGSDQKRIS---QDKEASYFDPVWSPQGDLIAFTK 365
                              L ++        +++    + E      VWSP G  IA+T 
Sbjct: 514 AEKKKRQEAGAELPPPERALAILDIASGKVTKVANVPPNGEVQEHGLVWSPDGKRIAYTW 573

Query: 366 FSG------------EKFAIGVMKKDGSQERLLVED 389
                           ++ + V   DG+    +   
Sbjct: 574 RQKHEGGRQEATNKETEWRLIVCDADGTNVTTVASQ 609



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 53/156 (33%), Gaps = 24/156 (15%)

Query: 310 SPDSSQIVFE---------SDREGKEQLYVMQSNGSDQKRISQDKEASYFD-----PVWS 355
           SPD   I +          SD   K +   +       + ++     +         VWS
Sbjct: 344 SPDGKTIAYRHPPQRTAKLSDLLTKSEPLKLHL---HVRALNDTGSGTDLGVECDSFVWS 400

Query: 356 PQGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSR 408
           P G  IA +    E     +    V++ +  ++  L         +W+P GR +    +R
Sbjct: 401 PDGTEIACSSVDDEPGRQPQATSLVVRVESKEKTELKLPPGHVITSWAPDGRFVTMRLTR 460

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               D  ++LY ++ +G     +     A+  +   
Sbjct: 461 TDPSDAKARLYLVNRDGSKHKALAPDTNATMGRMSP 496


>gi|206603866|gb|EDZ40346.1| Protein of unknown function [Leptospirillum sp. Group II '5-way
           CG']
          Length = 439

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 48/280 (17%), Positives = 91/280 (32%), Gaps = 62/280 (22%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYL----MDTRIDRAPKRIGNFRSMILA------- 262
           +  P FSP+ Q ++Y    D D L        +     R  +   + +  ++A       
Sbjct: 17  ILLPSFSPDGQMISYIRLTDPDALNELRDLGCLTVVDARTQEEKLDIKGDLVALNYRERG 76

Query: 263 -------PRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLF---INIS 306
                  P +S + +                   +Y  D+ +    R+   +    IN  
Sbjct: 77  RGYLDLVPVWSPDSRFVYFHYDDPAWESIGPRWSLYRADMTTGQVIRMPFPIEEYRINT- 135

Query: 307 ASYSPDSSQIVFESDREGKE-----------------QLYVMQSNGSDQKRI------SQ 343
              SP   +I   S +  K                  QL V  + G +   +        
Sbjct: 136 IEVSPSGKRIALNSRQRWKPYEKRFFWKTTKRMILADQLVVADNGGENPVNVVEWPKDRY 195

Query: 344 DKEASYFDPVWSPQGDLIAF-TKFSGEKFA----IGVMKKDGSQERLLVEDS-NLQAPTW 397
             +    D  WSP  DL+ +  +F   ++     + +        R L   S ++   +W
Sbjct: 196 RHQEELGDFHWSPVDDLLVYIVRFRENRYKEESFLYLYDPGTRVVRELFRTSEHIDHFSW 255

Query: 398 SPSGRSLIF----SRKKDGDTGSKLYSI-DLNGRNETLIN 432
           SP G+++ F     R +       LY I  ++G+ + L +
Sbjct: 256 SPDGQTIFFHTRDPRSQKSSRRYSLYRIQPVSGQTDRLTD 295



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/282 (18%), Positives = 91/282 (32%), Gaps = 54/282 (19%)

Query: 174 NSRILFVSESVV---SGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +SR ++         S   + SL   D   G  IR   P  +  +     SP+ +++A  
Sbjct: 89  DSRFVYFHYDDPAWESIGPRWSLYRADMTTGQVIRMPFPIEEYRINTIEVSPSGKRIALN 148

Query: 230 TY-----------------------------DDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +                                E+ + V        R  + +G+F    
Sbjct: 149 SRQRWKPYEKRFFWKTTKRMILADQLVVADNGGENPVNVVEWPKDRYRHQEELGDFH--- 205

Query: 261 LAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
               +S      +  V+  E        +Y  D  +     L  T       S+SPD   
Sbjct: 206 ----WSPVDDLLVYIVRFRENRYKEESFLYLYDPGTRVVRELFRTSEHIDHFSWSPDGQT 261

Query: 316 IVFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSG 368
           I F +          +  LY +Q       R++  +E  +F P+   +G+ I   T    
Sbjct: 262 IFFHTRDPRSQKSSRRYSLYRIQPVSGQTDRLTDHQE--FFYPMTPARGNQILLETHLEA 319

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               I +M       + +V+      P WSP+G S ++ R K
Sbjct: 320 GGRGISLMDSSTGNIQTVVKTGYNLYPVWSPTGESFVYLRTK 361



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 88/253 (34%), Gaps = 37/253 (14%)

Query: 192 SLCVMDRDGANIRYLTP------SRDQILFEPRFSPNQQKVAYATYDDEDILR----VYL 241
            L V D  G N   +           + L +  +SP    + Y     E+  +    +YL
Sbjct: 173 QLVVADNGGENPVNVVEWPKDRYRHQEELGDFHWSPVDDLLVYIVRFRENRYKEESFLYL 232

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATE 295
            D    R  + +      I    +S +G+      +            +Y +   S  T+
Sbjct: 233 YDPGT-RVVRELFRTSEHIDHFSWSPDGQTIFFHTRDPRSQKSSRRYSLYRIQPVSGQTD 291

Query: 296 RLTNT--LFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           RLT+    F  ++ +     +QI+ E+    G   + +M S+  + + + +     Y  P
Sbjct: 292 RLTDHQEFFYPMTPA---RGNQILLETHLEAGGRGISLMDSSTGNIQTVVKTGYNLY--P 346

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKD-------GSQERLL-----VEDSNLQAPTWSPS 400
           VWSP G+   + +   +         +       G     L             P +SP 
Sbjct: 347 VWSPTGESFVYLRTKPDAKPFWTWPAEPVLQFVKGGPPVKLAPVDSSARLTNCRPAFSPD 406

Query: 401 GRSLIFSRKKDGD 413
           GR+++F  K + +
Sbjct: 407 GRTILFVAKDESE 419



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 74/251 (29%), Gaps = 56/251 (22%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD--------IYSVDLQSNATE------ 295
            +++   +  IL P FS +G+        D            +  VD ++   +      
Sbjct: 7   TEKLVPGKVEILLPSFSPDGQMISYIRLTDPDALNELRDLGCLTVVDARTQEEKLDIKGD 66

Query: 296 ------RLTNTLFINISASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQKRISQ 343
                 R     ++++   +SPDS  + F  D         +  LY          R+  
Sbjct: 67  LVALNYRERGRGYLDLVPVWSPDSRFVYFHYDDPAWESIGPRWSLYRADMTTGQVIRMPF 126

Query: 344 D-KEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVEDSNLQAPT- 396
             +E        SP G  IA           ++F     K+    ++L+V D+  + P  
Sbjct: 127 PIEEYRINTIEVSPSGKRIALNSRQRWKPYEKRFFWKTTKRMILADQLVVADNGGENPVN 186

Query: 397 -------------------WSP-SGRSLIFSRKKDGDTGSK--LYSIDLNGRNET-LINT 433
                              WSP     +   R ++     +  LY  D   R    L  T
Sbjct: 187 VVEWPKDRYRHQEELGDFHWSPVDDLLVYIVRFRENRYKEESFLYLYDPGTRVVRELFRT 246

Query: 434 PAYASDPQWVG 444
             +     W  
Sbjct: 247 SEHIDHFSWSP 257


>gi|150010244|ref|YP_001304987.1| hypothetical protein BDI_3670 [Parabacteroides distasonis ATCC
           8503]
 gi|149938668|gb|ABR45365.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 503

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 92/317 (29%), Gaps = 56/317 (17%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E G     I+ + +  +    +  +   D  G N          +        +  ++ +
Sbjct: 156 EPGYEKWHIVGIYQRNLESFDEQPIIRNDMTGYNC---------MNCHSFCMGDPGQMMF 206

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---------- 278
                     +           K  G   +M   P +  +G+    SV            
Sbjct: 207 HMRAANGGTYIVQDKKISKLNTKTNGTISNMTY-PFWHPSGRYITTSVNDIKQFFHSVKE 265

Query: 279 ------DEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFES--------- 320
                 D   D+   D+++        L          ++SPD   + F +         
Sbjct: 266 KKMEVFDLESDVVVYDVKNKEILSKASLITKDAFETFPAFSPDGKWLYFCTAPAQKMPEN 325

Query: 321 -DREGKEQLYV-MQSNGSDQK----RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            D+       V    +  +       +      SY  P  SP G  + +T+ +  +F I 
Sbjct: 326 YDKVRYNLCRVAFDPDRGEISFPIDTLVHADSLSYTFPRISPDGRFLMYTETAYGQFPIW 385

Query: 375 VMKKDGSQE----RLLVEDSNLQAP------TWSPSGRSLIFSRKKDGD--TGSKLYSID 422
               +        R  ++ S L +P      +WS +   ++FS ++D    T   +  I 
Sbjct: 386 HPDAEIRMMDLENRTAMDMSALNSPDTDSYHSWSSNSDWVVFSSRRDNGLYTLPYICHIG 445

Query: 423 LNGRNETLINTPAYASD 439
            +G+       P    D
Sbjct: 446 KDGKPSKPFLLPQEDPD 462


>gi|322418148|ref|YP_004197371.1| hypothetical protein GM18_0614 [Geobacter sp. M18]
 gi|320124535|gb|ADW12095.1| hypothetical protein GM18_0614 [Geobacter sp. M18]
          Length = 455

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 59/194 (30%), Gaps = 22/194 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   VAY        + V+    +   A + +G             +GK     V 
Sbjct: 264 AISPDGSSVAYLAQKGGSRVVVWNGQEKPFPAGELVGPI-------TLRPDGKGVGFLVA 316

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQLYVMQ 332
              +   +         +  T          YS D    V+        + G+    V+ 
Sbjct: 317 SKGSCAFHE-PFAGAEAQ--TRPYDEVGELVYSKDGKSQVYLGRKATPGKTGRSIFAVVN 373

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             G +  R  +        P +SP G  + +      K  + V   DG   R   +   +
Sbjct: 374 --GKEGPRFDK-----VTTPKFSPDGQRVVYRARQDGKRFMVVSDLDGKVVRQGPDHEQV 426

Query: 393 QAPTWSPSGRSLIF 406
             P +SP G+ L +
Sbjct: 427 FPPVFSPDGKLLAY 440



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 80/224 (35%), Gaps = 30/224 (13%)

Query: 200 GANIRYLTPSRDQI----LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           G     +   +       +  P  SP+ Q++AY  Y D+ +    ++D R     + +  
Sbjct: 80  GGKFHVVHNGKPGTPYTNIINPTLSPDGQRLAYLAYVDDKLR--MVVDGRESEVVEELD- 136

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSPDS 313
                  P FS + +  +   +       + VD +  S    +            +S D 
Sbjct: 137 ------IPFFSPDSRHIVYQAKMGGR-WNFVVDGRICSGYRTQHNQFG-------FSADG 182

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           S+I +        Q  ++ ++   +K+  ++   +    V S     IA    +G +  +
Sbjct: 183 SRIAYVDTVAEGAQPRLVVTDLEFKKQTVRESTGAVM--VISEDRTRIAAISDAGGRQRV 240

Query: 374 ---GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                 K D  +E  L +  N++    SP G S+ +  +K G  
Sbjct: 241 VESSFAKPDAVKEGALYD--NIRGLAISPDGSSVAYLAQKGGSR 282



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 97/269 (36%), Gaps = 37/269 (13%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           TG V+   +DR R+   + D   R++++   F + P + ++ A  + D+I        G 
Sbjct: 215 TGAVMVISEDRTRIA-AISDAGGRQRVVESSF-AKPDAVKEGA--LYDNIRGLAISPDG- 269

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
             S + ++++   S        V+  +G    +      +++      P+ + V +    
Sbjct: 270 --SSVAYLAQKGGS-------RVVVWNGQEKPFP---AGELVGPITLRPDGKGVGFLVAS 317

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-----DEAMDIYSV 287
                          +           +    +S +GK  +   +K             V
Sbjct: 318 KGSCAFHEPFAGAEAQ-----TRPYDEVGELVYSKDGKSQVYLGRKATPGKTGRSIFAVV 372

Query: 288 DLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           + +      ++T          +SPD  ++V+ + ++GK  + V   +G   ++      
Sbjct: 373 NGKEGPRFDKVTT-------PKFSPDGQRVVYRARQDGKRFMVVSDLDGKVVRQ--GPDH 423

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              F PV+SP G L+A+    G K    V
Sbjct: 424 EQVFPPVFSPDGKLLAYGVKDGAKLVWNV 452



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 23/143 (16%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++       + +++ GK  +      G+           +  +P  SP G  +A+  +  
Sbjct: 66  FNATGRGFFYVAEQGGKFHVVHNGKPGT--------PYTNIINPTLSPDGQRLAYLAYVD 117

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN- 427
           +K     M  DG +  ++ E   L  P +SP  R +++  K  G          ++GR  
Sbjct: 118 DKLR---MVVDGRESEVVEE---LDIPFFSPDSRHIVYQAKMGGRWNFV-----VDGRIC 166

Query: 428 ---ETLINTPAYASDPQWVGFMD 447
               T  N   +++D   + ++D
Sbjct: 167 SGYRTQHNQFGFSADGSRIAYVD 189



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 58/173 (33%), Gaps = 20/173 (11%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F++ G+      ++     +             TN     I+ + SPD  ++ + +  + 
Sbjct: 66  FNATGRGFFYVAEQGGKFHVV---HNGKPGTPYTNI----INPTLSPDGQRLAYLAYVDD 118

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           K ++ V   +G + + + +        P +SP    I +    G ++   V  +  S  R
Sbjct: 119 KLRMVV---DGRESEVVEE-----LDIPFFSPDSRHIVYQAKMGGRWNFVVDGRICSGYR 170

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                       +S  G  + +          +L   DL  + +T+  +    
Sbjct: 171 TQHNQFG-----FSADGSRIAYVDTVAEGAQPRLVVTDLEFKKQTVRESTGAV 218



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 77/263 (29%), Gaps = 44/263 (16%)

Query: 219 FSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           FS +  ++AY  T  +    R+ + D    +   R      M++    S +  R      
Sbjct: 178 FSADGSRIAYVDTVAEGAQPRLVVTDLEFKKQTVRESTGAVMVI----SEDRTRIAAISD 233

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ----- 332
                 +           +           + SPD S + + + + G  ++ V       
Sbjct: 234 AGGRQRVVESSFAKPDAVKEGALYDNIRGLAISPDGSSVAYLAQKGGS-RVVVWNGQEKP 292

Query: 333 -SNGSDQKRISQDKEASYFDPVWSPQGD---------------------LIAFTKFSGEK 370
              G     I+   +      + + +G                       + ++K    +
Sbjct: 293 FPAGELVGPITLRPDGKGVGFLVASKGSCAFHEPFAGAEAQTRPYDEVGELVYSKDGKSQ 352

Query: 371 FAIGVMKKDGSQERLLVEDSNLQA---------PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +G     G   R +    N +          P +SP G+ +++  ++DG     +   
Sbjct: 353 VYLGRKATPGKTGRSIFAVVNGKEGPRFDKVTTPKFSPDGQRVVYRARQDGKRF--MVVS 410

Query: 422 DLNGRNETLINTPAYASDPQWVG 444
           DL+G+             P +  
Sbjct: 411 DLDGKVVRQGPDHEQVFPPVFSP 433


>gi|298374524|ref|ZP_06984482.1| cytochrome c binding protein [Bacteroides sp. 3_1_19]
 gi|298268892|gb|EFI10547.1| cytochrome c binding protein [Bacteroides sp. 3_1_19]
          Length = 492

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 73/470 (15%), Positives = 143/470 (30%), Gaps = 109/470 (23%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGF---FPTSIHAFVKVATN-SANYSPVSIAFTKFV 56
           M  + +      + + L  L+V           S++  + +  +      PV+IA   F 
Sbjct: 1   MERQTYTNTNRYLFLFLIALMVSCSKSDIQIAKSLNKEIAIYPDYKDVTIPVNIAPLNFS 60

Query: 57  SIDEL-------GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
             D         G K    V  D     +F  I Q                + W +L   
Sbjct: 61  IADSSEHCLIIKGEKTQLQVYSD---EGLFE-IPQ----------------KRWKAL--- 97

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
                 + +   +++ +          K+I G+    +P     +  +I   I   +   
Sbjct: 98  ------LKENAGNQIELTI-------AKRIQGEWNAYTPFHMDIVNDSIDKYIAYRLLAL 144

Query: 170 KGDFNSRILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             D  +R+     ++ +          + D +  N    +      +    F    +   
Sbjct: 145 SNDMWNRMGIYQRNLENYDQSVIYENSLTDYNCVNCHTFSSGNPDKMI---FHMRGKHAG 201

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--------- 278
               D + I ++        + P+ + NF  M     +  NG     +V           
Sbjct: 202 SVLIDGKKITKLN------TKTPETVSNFVYMY----WHPNGNYLAATVCDTYQNFFINN 251

Query: 279 -------DEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESD------- 321
                  D   DI   D++ N     E L +     I  ++SPD   + F S        
Sbjct: 252 PNTLEVLDHNSDIVIYDVKKNEVFSCEALNSKDAWQIFPAFSPDGKSLYFSSTAAVDSIS 311

Query: 322 ---REGKEQLYVMQSNG-----SDQKRISQDKEASY---FDPVWSPQGDLIAFTKFSGEK 370
              R+    L  +  +        Q     +  A++     P  SP G  +AFT      
Sbjct: 312 KNFRQMTYSLCRVDFDPETRTLGQQVDTLYNGRANHKSVSFPRISPDGKYLAFTLQEYGG 371

Query: 371 F-------AIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKK 410
           F        + +++    +   L E ++ +     +WS + R L+FS ++
Sbjct: 372 FGVWHKDAELYMIRLSDGKTYPLTEANSAEGESYHSWSHNNRWLVFSSRR 421



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 69/213 (32%), Gaps = 56/213 (26%)

Query: 289 LQSNATERL-TNTL---FINISASYSPDSSQIV----------FESDR------EGKEQL 328
           +      +L T T       +   + P+ + +           F ++       +    +
Sbjct: 205 IDGKKITKLNTKTPETVSNFVYMYWHPNGNYLAATVCDTYQNFFINNPNTLEVLDHNSDI 264

Query: 329 YVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTK----------FSGEKFAIGVM 376
            +     ++         K+A    P +SP G  + F+           F    +++  +
Sbjct: 265 VIYDVKKNEVFSCEALNSKDAWQIFPAFSPDGKSLYFSSTAAVDSISKNFRQMTYSLCRV 324

Query: 377 KKD------GSQERLLVEDSNLQ----APTWSPSGRSLIFSRKKDGDTG-----SKLYSI 421
             D      G Q   L            P  SP G+ L F+ ++ G  G     ++LY I
Sbjct: 325 DFDPETRTLGQQVDTLYNGRANHKSVSFPRISPDGKYLAFTLQEYGGFGVWHKDAELYMI 384

Query: 422 DL-NGRNETLINTP--------AYASDPQWVGF 445
            L +G+   L            +++ + +W+ F
Sbjct: 385 RLSDGKTYPLTEANSAEGESYHSWSHNNRWLVF 417


>gi|329934638|ref|ZP_08284679.1| protease [Streptomyces griseoaurantiacus M045]
 gi|329305460|gb|EGG49316.1| protease [Streptomyces griseoaurantiacus M045]
          Length = 1065

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 95/281 (33%), Gaps = 27/281 (9%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +T        R   +    V+   ++ + V   DG    +   + +  +  PR SP+  +
Sbjct: 1   MTQPASPAYLRFPHLHGDTVAFTAEDDVWVAPLDGGRA-WRVSADNVPVNHPRISPDGTR 59

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---EAM 282
           +A+ +    D      +         R+ ++ +      +++ G+   +S          
Sbjct: 60  LAWTS--TRDGAPEVHVAPLDGGPATRLTHWGTRTQVRGWTAEGEVLALSTHGQTSLRRT 117

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPD--------SSQIVFE-SDREGK-EQLYVMQ 332
            + +V L       L      +++    P           +  +    R G   +L++ +
Sbjct: 118 WVRAVPLDGGPATTLPYGPVGHVAH--GPHTVLLSATMGREAAWWKRYRGGTAGKLWIDR 175

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
               +  R+ +D + +   P+W   GD +AF        A+     DGS  R        
Sbjct: 176 EGEGEFVRLHEDLDGNLEYPLWV--GDRVAFLSDHEGTGALYSSLADGSDLRRHTPLGGF 233

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLIN 432
            A   +  G  +++S         +L+ + DL+G      +
Sbjct: 234 YARHAATDGTRVVYS------CAGELWILDDLDGAEPRRPD 268



 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 66/190 (34%), Gaps = 21/190 (11%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G     + + D    ++   L      R++           SPD +++ + S R+G  ++
Sbjct: 17  GDTVAFTAEDD----VWVAPLDGGRAWRVSADNVPVNHPRISPDGTRLAWTSTRDGAPEV 72

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL 385
           +V   +G    R++     +     W+ +G+++A +           +  +  DG     
Sbjct: 73  HVAPLDGGPATRLTHWGTRTQVRG-WTAEGEVLALSTHGQTSLRRTWVRAVPLDGGPATT 131

Query: 386 LVEDSNLQAPTWSP--------SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI---NTP 434
           L            P         GR   + ++  G T  KL+ ID  G  E +    +  
Sbjct: 132 LPYGPVGHVAH-GPHTVLLSATMGREAAWWKRYRGGTAGKLW-IDREGEGEFVRLHEDLD 189

Query: 435 AYASDPQWVG 444
                P WVG
Sbjct: 190 GNLEYPLWVG 199



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 95/311 (30%), Gaps = 35/311 (11%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRY--LTPSRDQI 213
           +++D          G F +R      + V       L ++D  DGA  R   +     ++
Sbjct: 217 SLADGSDLRRHTPLGGFYARHAATDGTRVVYSCAGELWILDDLDGAEPRRPDIRLGGQRV 276

Query: 214 LFEP------RF----SPN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             +P      R+    +P+   +  A A         V+ +  R   A            
Sbjct: 277 DLQPQPVNAARWFGAAAPDHTGRGSAVAVRG-----SVHWVTHRSGPARALADEHGVRTR 331

Query: 262 APR-FSSNGK-RALISVQKDEAMDIYSVDLQSN----ATERLTNTL-FINISASYSPDSS 314
            PR F S G+   +     +    +               RL        +  + +PD S
Sbjct: 332 LPRTFRSEGEEWVVWVTDAEGEDALEFAPATGGTPGTGPRRLAAGRLGRVLGLAMAPDGS 391

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-I 373
           +    S      ++ +++    + + + + +       V+SP    +A++         +
Sbjct: 392 RAAVASH---DGRVLLVERESGEVREVDRSENGEASGLVFSPDSTWLAWSHPGPGPLRQL 448

Query: 374 GVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNET 429
            +    D S            +P ++  G+ L F   +  D     +  DL    G    
Sbjct: 449 KLANTADLSVTEATPLRFRDFSPAFTLDGKHLAFLSARSFDPVYDEHVFDLAFVGGVRPH 508

Query: 430 LINTPAYASDP 440
           LI   A    P
Sbjct: 509 LITLAATTPSP 519


>gi|329941229|ref|ZP_08290508.1| protease [Streptomyces griseoaurantiacus M045]
 gi|329299760|gb|EGG43659.1| protease [Streptomyces griseoaurantiacus M045]
          Length = 1119

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 74/209 (35%), Gaps = 21/209 (10%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +++        P+R+   R+    PRFS +G+    +  +    +I+ V +    + RLT
Sbjct: 35  LWIAPLDGSTHPRRLTVDRTRTGHPRFSPDGRYLAYTTWRSLDPEIHLVPVTGGPSRRLT 94

Query: 299 NTLFINISAS-YSP-----DSSQIVFESDREGKEQL---YVMQSNGSDQKRISQDKEASY 349
                +     ++P      S+ +   S  E    L   Y + ++GS  +R+        
Sbjct: 95  YWGSTDTRVRGWTPPDAEGRSAVLAVTSHDEPFSHLTWAYKVDTDGSPGRRLPWGPVTDI 154

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--------DSNLQAPTWSPSG 401
                  +   +  T     + A     + G+  RL +         D +L AP +   G
Sbjct: 155 QVADLGGERRSLLLTGTPPHEPASWKRYRGGATGRLWLHGRRLLADLDGHLDAPVFL--G 212

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             + F    +G     LYS   +G +   
Sbjct: 213 DRIAFLSDHEG--VGNLYSCAHDGSDLRR 239



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 94/279 (33%), Gaps = 26/279 (9%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D + Q+ T        R   +   ++  + ++ L +   DG+               PRF
Sbjct: 2   DTVRQTTTDATARGYLRYPHLHGDLLCFVAEDDLWIAPLDGSTHPRRLTVDRTRTGHPRF 61

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSS---NGKRALIS 275
           SP+ + +AY T+   D     +  T      +R+  + S     R ++     G+ A+++
Sbjct: 62  SPDGRYLAYTTWRSLDPEIHLVPVT--GGPSRRLTYWGSTDTRVRGWTPPDAEGRSAVLA 119

Query: 276 VQKDEAM-----DIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLY 329
           V   +         Y VD   +   RL      +I  A    +   ++       +   +
Sbjct: 120 VTSHDEPFSHLTWAYKVDTDGSPGRRLPWGPVTDIQVADLGGERRSLLLTGTPPHEPASW 179

Query: 330 VMQSNGSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                G+        +R+  D +     PV+   GD IAF         +     DGS  
Sbjct: 180 KRYRGGATGRLWLHGRRLLADLDGHLDAPVFL--GDRIAFLSDHEGVGNLYSCAHDGSDL 237

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           R   +     A   +  G  +++          +L+ +D
Sbjct: 238 RRHTDHEEFYARHAAGDGSRVVY------QCAGELWLVD 270



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 50/143 (34%), Gaps = 21/143 (14%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              + F ++    + L++   +GS   R           P +SP G  +A+T +      
Sbjct: 24  GDLLCFVAE----DDLWIAPLDGSTHPRRLTVDRTRTGHPRFSPDGRYLAYTTWRSLDPE 79

Query: 373 IGVMKKDGSQERLLV--EDSNLQAPTWSP---SGRSLIFSRKKDGDTGSKL---YSIDLN 424
           I ++   G   R L     ++ +   W+P    GRS + +     +  S L   Y +D +
Sbjct: 80  IHLVPVTGGPSRRLTYWGSTDTRVRGWTPPDAEGRSAVLAVTSHDEPFSHLTWAYKVDTD 139

Query: 425 GRNETLINTPAYASDPQWVGFMD 447
           G     +          W    D
Sbjct: 140 GSPGRRLP---------WGPVTD 153



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 81/259 (31%), Gaps = 34/259 (13%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAPK 251
            +  RDG   R LT +    +  P       +VAY T  + +  +   +L      RAP+
Sbjct: 325 WLTHRDG-PARTLTDTPGVRVRLPEMLGGSGQVAYVTDAEGEDAVEIAHLPRASGARAPR 383

Query: 252 RIGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           R+   R   +        G    ++   D  + +  V     AT               +
Sbjct: 384 RLAAGRLGRVREMVADPAGGCLALA-SHDGRLLLVRVPETDGATPEEMTGPEREHDPR-A 441

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----F 366
           P  S                    G +   + +       D  +SP G  + ++      
Sbjct: 442 PGEST-------------------GCEVTELVRSVNGPVRDLAFSPDGAWLTWSHPGIGR 482

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           S  +  +  +    +   L V D   +   P ++  GR L F   +  D    +++ DL+
Sbjct: 483 SLRQIRMARITWPEAGPVLDVTDGRFEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLS 542

Query: 425 ---GRNETLINTPAYASDP 440
              G    L+   +    P
Sbjct: 543 FPLGCRPYLVTLSSATPSP 561


>gi|126660483|ref|ZP_01731591.1| WD-40 repeat protein [Cyanothece sp. CCY0110]
 gi|126618242|gb|EAZ89003.1| WD-40 repeat protein [Cyanothece sp. CCY0110]
          Length = 930

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 102/325 (31%), Gaps = 51/325 (15%)

Query: 120 GKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
             DR  +        RLWD K  K I   +  +             + +Y       G +
Sbjct: 604 PDDRYLISAASDNTIRLWDRKTGKAIKQLQQHT-------------NWVYSVACSPDGRW 650

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     +  G    ++ + D             +  +    F P+ Q +   ++D 
Sbjct: 651 ----------IAIGYNDWTVRLWDIIEQREVNCLEGHESSVSSVAFCPDNQHLISGSWDG 700

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-----D 288
                + + D    +  + + + ++ I +   S NG+    S   D+ + ++ +      
Sbjct: 701 ----TLRVWDIHTGKCKRILQDHQNWISSVAVSPNGQWVA-SGGWDKTVHLWEIAYSWTQ 755

Query: 289 LQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            Q+    R+      +I   ++SP+S  +         + + + +     Q +  +  + 
Sbjct: 756 FQATKPTRILQGHLEDIEGVAFSPNSQLVASC---GNDKTIKIWEVVSGQQVQQLEGHKY 812

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIF 406
           S  D V+SP G  IA            ++   G +        + +    +S  G  LI 
Sbjct: 813 SVEDVVFSPDGQFIASVSRDKTVRVWHIIS--GKEVHKFQGHTNYVYCVAFSLDGHYLI- 869

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLI 431
                G     +   DL     T +
Sbjct: 870 ----SGGKDKMIAIWDLISGELTQL 890



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 91/260 (35%), Gaps = 19/260 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S I   ++ +                  +    F P+ + +  A  D+     + L D +
Sbjct: 569 STINDKTIRIWSVAKQQQTQQLKGHTNSIQAIAFCPDDRYLISAASDN----TIRLWDRK 624

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +A K++    + + +   S +G+   I    D  + ++ + ++      L        
Sbjct: 625 TGKAIKQLQQHTNWVYSVACSPDGRWIAIGYN-DWTVRLWDI-IEQREVNCLEGHESSVS 682

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++ PD+  ++  S       L V   +    KRI QD +        SP G  +A   
Sbjct: 683 SVAFCPDNQHLISGS---WDGTLRVWDIHTGKCKRILQDHQNWISSVAVSPNGQWVASGG 739

Query: 366 FSGEK--FAI---GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +      + I       +     R+L     +++   +SP+ + +        D   K++
Sbjct: 740 WDKTVHLWEIAYSWTQFQATKPTRILQGHLEDIEGVAFSPNSQLVA---SCGNDKTIKIW 796

Query: 420 SIDLNGRNETLINTPAYASD 439
            + ++G+    +    Y+ +
Sbjct: 797 EV-VSGQQVQQLEGHKYSVE 815



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 94/289 (32%), Gaps = 56/289 (19%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R      D        S N++ +A     +     +YL D    +  +++      I 
Sbjct: 374 NNRTTHWEIDCPSSWGDVSKNKKLLALVWQQN-----IYLWDLTQGKFLRQLQGHSKKIT 428

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV---- 317
              F+ +G   L+S   DE + I+ +         L+  +    + ++S D+  I     
Sbjct: 429 GLAFNKDG-SLLLSGSLDETLIIWEI-KTGTKRHELSEPMGRITAVAFSEDNQFIASGSH 486

Query: 318 -----------------------------FESD-----REGKEQ-LYVMQSNGSDQKRIS 342
                                        F SD       G+++ +++        +++ 
Sbjct: 487 TGIVRIWGAISGQEWRCLEGHGTAIESLIFSSDSKVLASGGRDKTIHLWNVTSGKSQQVL 546

Query: 343 QDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           +  +       ++   D +A     + +   I  + K    ++L    +++QA  + P  
Sbjct: 547 EGHQDWVTALSFNQNADKLASASTINDKTIRIWSVAKQQQTQQLKGHTNSIQAIAFCPDD 606

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
           R LI       D   +L+        + L      + + A + D +W+ 
Sbjct: 607 RYLI---SAASDNTIRLWDRKTGKAIKQLQQHTNWVYSVACSPDGRWIA 652


>gi|209523192|ref|ZP_03271748.1| WD40 domain protein beta Propeller [Arthrospira maxima CS-328]
 gi|209496343|gb|EDZ96642.1| WD40 domain protein beta Propeller [Arthrospira maxima CS-328]
          Length = 176

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 5/134 (3%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSP 311
           N  S  + P+ SS+    + +  +    DIY  D Q      L     I+      + S 
Sbjct: 44  NSPSSEMNPQISSD--YLVFASDRQGRQDIYLYDRQQAEFIDLPGLNSIDAIASEPAISS 101

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D + IVF S R G+  +Y+   N    + ++    A    P  +    +IAF      ++
Sbjct: 102 DGNYIVFNSTRGGQSDIYLYNRNTRQLRNLTDSLNAQVRHPTINADASVIAFESSLNGQW 161

Query: 372 AIGVMKKDGSQERL 385
            I V  + G    +
Sbjct: 162 DIVVYNRYGQALNI 175



 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 6/125 (4%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSP 356
           N+    ++   S D   +VF SDR+G++ +Y+     ++   +      +A   +P  S 
Sbjct: 44  NSPSSEMNPQISSD--YLVFASDRQGRQDIYLYDRQQAEFIDLPGLNSIDAIASEPAISS 101

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G+ I F    G +  I +  ++  Q R L +   + ++ PT +     + F    +G  
Sbjct: 102 DGNYIVFNSTRGGQSDIYLYNRNTRQLRNLTDSLNAQVRHPTINADASVIAFESSLNGQW 161

Query: 415 GSKLY 419
              +Y
Sbjct: 162 DIVVY 166



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 6/130 (4%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFS 266
           +       P+ S +   + +A+        +YL D +        G  +  ++   P  S
Sbjct: 44  NSPSSEMNPQISSDY--LVFASDRQGR-QDIYLYDRQQAEFIDLPGLNSIDAIASEPAIS 100

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGK 325
           S+G   + +  +    DIY  +  +     LT++L   +   + + D+S I FES   G+
Sbjct: 101 SDGNYIVFNSTRGGQSDIYLYNRNTRQLRNLTDSLNAQVRHPTINADASVIAFESSLNGQ 160

Query: 326 EQLYVMQSNG 335
             + V    G
Sbjct: 161 WDIVVYNRYG 170



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 34/109 (31%), Gaps = 3/109 (2%)

Query: 188 IIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             +  + + DR  A    L    S D I  EP  S +   + + +        +YL +  
Sbjct: 66  QGRQDIYLYDRQQAEFIDLPGLNSIDAIASEPAISSDGNYIVFNSTRGGQS-DIYLYNRN 124

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             +      +  + +  P  +++          +   DI   +    A 
Sbjct: 125 TRQLRNLTDSLNAQVRHPTINADASVIAFESSLNGQWDIVVYNRYGQAL 173


>gi|71281981|ref|YP_270182.1| putative transcriptional regulator [Colwellia psychrerythraea 34H]
 gi|71147721|gb|AAZ28194.1| putative transcriptional regulator [Colwellia psychrerythraea 34H]
          Length = 712

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 6/169 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +++V    ++      + +   + LT  +      + SPD SQ+ +     GK     +
Sbjct: 157 LIVAVSFYFSIQQNIEIIATKQLKPLTREIADEQHPNVSPDLSQLAYTKVVRGKPSYINI 216

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK----KDGSQERLLV 387
           ++     K            PVWSP    IAF     +   I + +    K+    + + 
Sbjct: 217 ENLSDHSKMSVSHPRGKLSRPVWSPTESKIAFLYQHKQVCIIFLAEQKEIKNKDNWQEIT 276

Query: 388 EDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           E S    P   +SP G+ L F+ ++    G +++ +DL  + + +IN P
Sbjct: 277 ECSGESWPHLVFSPDGQYLYFNDRQSKANGYQIFRVDLLNKQKDIINQP 325



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 81/233 (34%), Gaps = 21/233 (9%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P  SP+  ++AY          + + +   D +   + + R  +  P +S    +    
Sbjct: 191 HPNVSPDLSQLAYTKVVRGKPSYINIENL-SDHSKMSVSHPRGKLSRPVWSPTESKIAFL 249

Query: 276 VQKDEAMDIYSV---DLQSN-ATERLTNTLFINISA-SYSPDSSQIVFESDREGK---EQ 327
            Q  +   I+     ++++    + +T     +     +SPD   + F  DR+ K    Q
Sbjct: 250 YQHKQVCIIFLAEQKEIKNKDNWQEITECSGESWPHLVFSPDGQYLYFN-DRQSKANGYQ 308

Query: 328 LYVMQSNGSDQ----KRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQ 382
           ++ +      +    + I+  +    FD   SP G  +         +  I  +    ++
Sbjct: 309 IFRVDLLNKQKDIINQPITSGQGNYAFD--ISPDGQRLVMLNSEFTSQTRIYTLDIAQAK 366

Query: 383 ERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            +L  +    + A  W     +L+           +L+  +L G    ++ + 
Sbjct: 367 LQLRAKLPYLMGAVVWHHDNMTLV---HPSPHPAYELWQSNLAGEKLAVVVSN 416



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 89/255 (34%), Gaps = 23/255 (9%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           +    + +   I+D+ + +++ +     S++ +           N   + D    + +  
Sbjct: 175 ATKQLKPLTREIADEQHPNVSPD----LSQLAYTKVVRGKPSYINIENLSD----HSKMS 226

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL---MDTRIDRAPKRIGNFRSMIL-A 262
                  L  P +SP + K+A+  Y  + +  ++L    + +     + I          
Sbjct: 227 VSHPRGKLSRPVWSPTESKIAFL-YQHKQVCIIFLAEQKEIKNKDNWQEITECSGESWPH 285

Query: 263 PRFSSNGKRALISVQKD--EAMDIYSVDLQSNAT----ERLTNTLFINISASYSPDSSQI 316
             FS +G+    + ++       I+ VDL +       + +T+    N +   SPD  ++
Sbjct: 286 LVFSPDGQYLYFNDRQSKANGYQIFRVDLLNKQKDIINQPITSGQG-NYAFDISPDGQRL 344

Query: 317 VF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           V   S+   + ++Y +    +   ++           VW      +         + +  
Sbjct: 345 VMLNSEFTSQTRIYTLDIAQAKL-QLRAKLPYLMGAVVWHHDNMTLVHPSPHP-AYELWQ 402

Query: 376 MKKDGSQERLLVEDS 390
               G +  ++V ++
Sbjct: 403 SNLAGEKLAVVVSNT 417



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 103/322 (31%), Gaps = 69/322 (21%)

Query: 161 DIYQSITGEKGDFNSRILFVSES-----VVSGIIKNSLCVMDRDGANIR------YLTPS 209
           D +Q IT   G+    ++F  +             N   +   D  N +       +T  
Sbjct: 270 DNWQEITECSGESWPHLVFSPDGQYLYFNDRQSKANGYQIFRVDLLNKQKDIINQPITSG 329

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN- 268
           +    F+   SP+ Q++     +     R+Y +D    +   R      ++ A  +  + 
Sbjct: 330 QGNYAFD--ISPDGQRLVMLNSEFTSQTRIYTLDIAQAKLQLR-AKLPYLMGAVVWHHDN 386

Query: 269 --------------------GKRALISVQ--------------KDEAMDIYSVDLQ---- 290
                               G++  + V               +D     Y ++      
Sbjct: 387 MTLVHPSPHPAYELWQSNLAGEKLAVVVSNTSRVKQLSRINNKQDFTFVSYLINRDIHFK 446

Query: 291 ----SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                N +  L N+  ++   + + +S Q  F S R    ++Y+      +++  +  + 
Sbjct: 447 DSNKDNQSMNLDNSSVMDYLPALANNSGQYAFVSKRSTTAEVYLAPLPTENKRVATSKQL 506

Query: 347 ASYFDPV------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSP 399
             +  P+      +SP    +     +     I ++  D  +   L   +   +  +W  
Sbjct: 507 TFFNAPMRLYQLLFSPDDSQLMVLADN----QIVIVDIDKGEVNKLALGNRAISGISW-Q 561

Query: 400 SGRSLIFSRKKDGDTGSKLYSI 421
              +L+FS  ++ D     Y+I
Sbjct: 562 DQHTLLFSTIRNNDWQLMQYNI 583


>gi|115433761|ref|XP_001217017.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114189869|gb|EAU31569.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 1687

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 59/406 (14%), Positives = 129/406 (31%), Gaps = 79/406 (19%)

Query: 73   LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
            L+ S    L++   F++        P    W+      LVTG+++ + +      +    
Sbjct: 1208 LRLSPDGTLLTSVQFRRVNAFISQGPTVAVWS------LVTGKLVHQLEGHSDYIYNAIF 1261

Query: 133  VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS---RILFVSESVVSGII 189
              D K +       +   W         D+    + E+ D ++   R + VS  +     
Sbjct: 1262 SSDNKLLASASRDGTIRLW---------DLSAQASSERPDGHTESVRSIIVSPDLRVAAS 1312

Query: 190  KNSL---CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +  L    + D +  ++R         + +P FSP+ +     ++       V +     
Sbjct: 1313 RAELGRIRLWDVETGSLRQTFDG--GPMADPSFSPDGK-----SFLVPLGKEVQVWSIAT 1365

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-------DLQSNATERLTN 299
                + I  +   ++   FS +G    +   K    ++           +         N
Sbjct: 1366 GELTRCINRYSRHVICSAFSPDGSLLAL---KYANANLCLAKERTLGGTVDGG------N 1416

Query: 300  TLFINI---------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
               ++                      F S       + +  S      ++++     + 
Sbjct: 1417 DPGVDTDELQLFGCGEPH---------FISSTIMPPAVGIWNSATGALLQVAKGASEDHG 1467

Query: 351  DPVWSPQGDLIAFT-------KFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGR 402
               +SP G  +AF        +     + I +      +  +L +   ++ A +WSP G 
Sbjct: 1468 CLAFSPNGRFLAFGPHHTSVERIWNGGW-IAIWDVPNGELSVLGDFVQDVIAVSWSPDGN 1526

Query: 403  SLIFSRKKDGDTGSKLYSIDLNGR-------NETLINTPAYASDPQ 441
            +L  S   D  + S++   D+  R        ET  +  A++ D Q
Sbjct: 1527 ALA-SIIVDDTSESQIQIWDMTTRSLNTSIKPETWPHLTAFSPDGQ 1571



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 50/154 (32%), Gaps = 22/154 (14%)

Query: 264  RFSSNGKRALI-----SVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             FS NG+         SV++      I   D+ +     L + +   I+ S+SPD + + 
Sbjct: 1470 AFSPNGRFLAFGPHHTSVERIWNGGWIAIWDVPNGELSVLGDFVQDVIAVSWSPDGNALA 1529

Query: 318  -FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                D   + Q+ +           S   E       +SP G L+      G  + +   
Sbjct: 1530 SIIVDDTSESQIQIWDMTTRSLN-TSIKPETWPHLTAFSPDGQLLLSASHDGT-YQLW-- 1585

Query: 377  KKDGSQERLLVEDSNLQAPT------WSPSGRSL 404
                 + R        ++P       +S  G  +
Sbjct: 1586 -----EARTGTMIGQRESPWEAQRLQFSEDGNMI 1614



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 47/151 (31%), Gaps = 8/151 (5%)

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQK 225
                G F   + F         I N   +   D  N    +     Q +    +SP+   
Sbjct: 1471 FSPNGRF---LAFGPHHTSVERIWNGGWIAIWDVPNGELSVLGDFVQDVIAVSWSPDGNA 1527

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +A    DD    ++ + D         I    +      FS +G + L+S   D    ++
Sbjct: 1528 LASIIVDDTSESQIQIWDMTTRSLNTSI-KPETWPHLTAFSPDG-QLLLSASHDGTYQLW 1585

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQI 316
                 +   +R   + +      +S D + I
Sbjct: 1586 EARTGTMIGQR--ESPWEAQRLQFSEDGNMI 1614



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 79/243 (32%), Gaps = 21/243 (8%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILRVYLM- 242
              G    S  +   D  N   L         +   FSP+ Q V   +      +RV+ + 
Sbjct: 965  PDGKRVASSNLCIWDTENGTLLREFAPLGAGYRVAFSPDGQFV--MSISHPGHVRVWNLA 1022

Query: 243  -DTRIDRAPKRIGNFRSMILAP--RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                I      +   +   LAP   FS++ +R  +       +    +D+++  + R+  
Sbjct: 1023 SGLLIQEVASSLEKTQKTHLAPLHLFSAD-RRIAVIASY--TLKFEVIDIRNGTSLRIIE 1079

Query: 300  TLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                + +  + S D   +   S  +G  +L+         +        +    V+SP  
Sbjct: 1080 GPKDDLLHMALSNDGVLLASGS-ADGCVRLW--DVRTGILQHEFAGHLDAIGRVVFSPDD 1136

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             L+A          + V   D   E+L           +  +   L+ S  +   +  +L
Sbjct: 1137 KLLASVSNDKT---VKVWDLD-KGEQLAELSGEFLDLAFL-NSAILMCS--QPDHSNIQL 1189

Query: 419  YSI 421
            + +
Sbjct: 1190 WDV 1192


>gi|119774825|ref|YP_927565.1| peptidase [Shewanella amazonensis SB2B]
 gi|119767325|gb|ABL99895.1| peptidase, putative [Shewanella amazonensis SB2B]
          Length = 684

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 89/261 (34%), Gaps = 42/261 (16%)

Query: 220 SPNQQKVAY----ATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+  K+ Y       D      ++L+D T    AP ++ + +       F+++GK  L 
Sbjct: 45  SPDGSKLVYGLKEINEDGSSESNLFLLDLTNPKAAPLQLTSAKGTEHDVVFAADGKSILF 104

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQ 332
              +D    +Y + L      ++++          SPD +++        E         
Sbjct: 105 LASRDGTSQLYRLPLDGGEAVKVSDLPLDINGIKLSPDGNKLAMTLRVFPECDTLECSKD 164

Query: 333 SNGSDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVE 388
              ++ KR S  +E S      W         T     +  + V   +G        + +
Sbjct: 165 KFDAEAKRKSNGREYSQLMVRHWD--------TWHDHARNHLFVADINGNTLGTPVNVTQ 216

Query: 389 DSNLQAP----------TWSPSGRSLIFSR-----KKDGDTGSKLYSIDL-NGRNETLIN 432
             + + P           ++   + L++S       +   T   L+ + +  G+ E L  
Sbjct: 217 GLDTEVPPKPFSGMEEVAFTADSQHLVYSAKAPSKDQAWTTNYDLWKVSVKGGKTENLTA 276

Query: 433 T-------PAYASDPQWVGFM 446
                   P ++SD  ++ ++
Sbjct: 277 NNIAWDAQPVFSSDGAYMAYL 297



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 85/262 (32%), Gaps = 70/262 (26%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ- 277
           F+ + + + +    D    ++Y +      A K + +    I   + S +G +  ++++ 
Sbjct: 95  FAADGKSILFLASRDG-TSQLYRLPLDGGEAVK-VSDLPLDINGIKLSPDGNKLAMTLRV 152

Query: 278 ---------------------------------------KDEAMDIYSVDLQS---NATE 295
                                                        ++  D+         
Sbjct: 153 FPECDTLECSKDKFDAEAKRKSNGREYSQLMVRHWDTWHDHARNHLFVADINGNTLGTPV 212

Query: 296 RLTNTLFINISA---------SYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQK 339
            +T  L   +           +++ DS  +V+ +    K+Q +    +       G   +
Sbjct: 213 NVTQGLDTEVPPKPFSGMEEVAFTADSQHLVYSAKAPSKDQAWTTNYDLWKVSVKGGKTE 272

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            ++ +  A    PV+S  G  +A+       F  +++AI +      QE+ +    + ++
Sbjct: 273 NLTANNIAWDAQPVFSSDGAYMAYLAMKRPGFEADRYAIMLRDLKTGQEKEVAPLWD-RS 331

Query: 395 PT---WSPSGRSLIFSRKKDGD 413
           P+   ++   R+L  + +  G 
Sbjct: 332 PSSIQFADDNRTLYVTAQDVGQ 353


>gi|172037089|ref|YP_001803590.1| WD-40 repeat-containing serine/threonine protein kinase [Cyanothece
           sp. ATCC 51142]
 gi|171698543|gb|ACB51524.1| WD-40 repeat-containing serine/threonine protein kinase [Cyanothece
           sp. ATCC 51142]
          Length = 724

 Score = 73.1 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 110/308 (35%), Gaps = 53/308 (17%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            V+     +L V        R+W+ +    +  + F       R +          +++ 
Sbjct: 432 SVVLSSNGKLAVSGGEDKTVRVWNTETGSLL--QTFSGHGDGVRSV----------TVSH 479

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           +     S     +  + +             G  IR LT  +D  L+    SP+QQ +A 
Sbjct: 480 DGNVIASASADQTIKLWNT----------ATGELIRTLTAHQDS-LWSVEISPDQQIIAS 528

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           A+ D+     + L +       + +      + +  FS +GKR   S  KD  + ++  D
Sbjct: 529 ASADE----TIKLWNMATAEVIRTLRGHSGWVFSATFSPDGKRLA-SGGKDGTVKLW--D 581

Query: 289 LQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +Q+    + L++      S ++SPD + +   S  +G  +++ M +     K +S   E 
Sbjct: 582 VQTGQMLQTLSDHQDAVRSVAFSPDGNYLASGS-WDGTVKVWEMATG----KVLSTFSEH 636

Query: 348 SYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS----PSG 401
           S       +S  G  +                     +RLL   ++ +    S    PSG
Sbjct: 637 SDRIVAVTFSRDGQRLVSGSIDETLQVWDWQN-----QRLLDTLTDHRDWVLSVATGPSG 691

Query: 402 RSLIFSRK 409
             +  SR+
Sbjct: 692 EMISSSRQ 699


>gi|269929111|ref|YP_003321432.1| hypothetical protein Sthe_3210 [Sphaerobacter thermophilus DSM
           20745]
 gi|269788468|gb|ACZ40610.1| hypothetical protein Sthe_3210 [Sphaerobacter thermophilus DSM
           20745]
          Length = 630

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 90/249 (36%), Gaps = 30/249 (12%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N+L V    GA    LT +     F   +SP+  ++A A         V L+ T      
Sbjct: 37  NNLWVSQDSGAGAVQLTTAGGYTGFV--WSPDGTRLA-AVGPVSGGAGVSLVGTDPSFGV 93

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + +        AP +S + +R  I     +   ++  D +      +   +  +    +S
Sbjct: 94  RELHTG----TAPAWSPDSRRVAII----DGGTVHIYDREGGYQRSV--GVGADA-IQWS 142

Query: 311 PDSSQIVFE---SDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           PD  +I F    SD  G       L  + ++      +++    ++    W+  G  + +
Sbjct: 143 PDGRRIGFTRWLSDPYGTGCAIRDLGWIDADTGASHGVAR----TFGKFAWAGDGARLLY 198

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTW-SPSGRSLIFSRKKDGDTGSKLYSI 421
                         + GS +RL    +N    P + S  GR+L F     G  G  L ++
Sbjct: 199 VSADDGTVR-AFDTRSGSGQRLSSRSANPCGGPFFTSNDGRTLFFLDY--GAGGRDLVAV 255

Query: 422 DLNGRNETL 430
           +L+   E +
Sbjct: 256 NLSSLQERV 264



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 11/138 (7%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D   +++          +LT          +SPD +++       G   + ++ ++ S  
Sbjct: 34  DRGNNLWVSQDSGAGAVQLTTAGGY-TGFVWSPDGTRLAAVGPVSGGAGVSLVGTDPSFG 92

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            R      A    P WSP    +A     G    I    ++G  +R +       A  WS
Sbjct: 93  VRELHTGTA----PAWSPDSRRVAII--DGGTVHIY--DREGGYQRSV--GVGADAIQWS 142

Query: 399 PSGRSLIFSRKKDGDTGS 416
           P GR + F+R      G+
Sbjct: 143 PDGRRIGFTRWLSDPYGT 160



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 16/140 (11%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +AS  P    +V   DR     L+V Q +G+   +++      Y   VWSP G  +A  
Sbjct: 20  TAASIQPSG--LVAYLDRG--NNLWVSQDSGAGAVQLTTAG--GYTGFVWSPDGTRLAAV 73

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                   + ++  D S     +      AP WSP  R +          G  ++  D  
Sbjct: 74  GPVSGGAGVSLVGTDPSFGVRELHTGT--APAWSPDSRRVAII------DGGTVHIYDRE 125

Query: 425 GRNETLINTPAYASDPQWVG 444
           G  +  +   A A   QW  
Sbjct: 126 GGYQRSVGVGADAI--QWSP 143


>gi|259910288|ref|YP_002650644.1| hypothetical protein EpC_36630 [Erwinia pyrifoliae Ep1/96]
 gi|224965910|emb|CAX57443.1| Conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96]
          Length = 422

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 51/157 (32%), Gaps = 18/157 (11%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                          +RLT T       +  S   +   SPD S I F   D  G  QL+
Sbjct: 270 GTATTLPAPPAGVKQKRLTYTAQRAYPGLATSPRHWLRSSPDGSAIAFLMKDDAGIVQLW 329

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +   G   +++++          W P G  +AF   +     I +        R + E 
Sbjct: 330 TVSPQGGSPRQVTRCDSDIQSAFSWHPDGRRLAFVCDN----RITLCDVASGALRGIGER 385

Query: 390 SN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           S       A  +SP GR + F R   G        +D
Sbjct: 386 SELPPVADAVVFSPDGRRVAFLRDCVGYRQIFTVLVD 422



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 11/130 (8%)

Query: 212 QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +   PR     SP+   +A+   DD  I++++ +  +     +       +  A  +  
Sbjct: 297 GLATSPRHWLRSSPDGSAIAFLMKDDAGIVQLWTVSPQGGSPRQVTRCDSDIQSAFSWHP 356

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREG 324
           +G+R            I   D+ S A   +   +    +  +  +SPD  ++ F  D  G
Sbjct: 357 DGRRLAFVCDN----RITLCDVASGALRGIGERSELPPVADAVVFSPDGRRVAFLRDCVG 412

Query: 325 KEQLYVMQSN 334
             Q++ +  +
Sbjct: 413 YRQIFTVLVD 422



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 3/96 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G + R +T     I     + P+ +++A+   +   +  V     R      
Sbjct: 327 QLWTVSPQGGSPRQVTRCDSDIQSAFSWHPDGRRLAFVCDNRITLCDVASGALRGIGERS 386

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            +     +  A  FS +G+R            I++V
Sbjct: 387 EL---PPVADAVVFSPDGRRVAFLRDCVGYRQIFTV 419


>gi|148654772|ref|YP_001274977.1| hypothetical protein RoseRS_0605 [Roseiflexus sp. RS-1]
 gi|148566882|gb|ABQ89027.1| hypothetical protein RoseRS_0605 [Roseiflexus sp. RS-1]
          Length = 422

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/314 (15%), Positives = 99/314 (31%), Gaps = 51/314 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------ 227
           +  I++V + V +  +   L     DG+N   L+   +  +  P  SP+   +A      
Sbjct: 117 DGTIVYVVQGVGAPPL---LVRTAADGSNRTVLSD--NLYITSPLISPDGTTIAVGVSED 171

Query: 228 -----------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA---L 273
                      YA        R+ L D          G+ R    A  +S +G +     
Sbjct: 172 YERPGSQTPGIYALPIAGGAPRLILADIPATDPTTEGGDGRGFT-AVAWSPDGTKLLANA 230

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFI----NISASYSPDSSQIVFESDREG----K 325
            S+   E  ++  VD+ S     L +           A++SPD   ++F +         
Sbjct: 231 YSLSV-ELCELAIVDVASGDQVYLGDRAANLKSACTPAAWSPDGRTVLFNTGDPALALPD 289

Query: 326 EQLYVMQSNGSDQKRISQDKEA-----------SYFDPVWSPQGDLIAFTKFSGE---KF 371
             ++    +G     +  + +            + +  V S  G    ++  + E    +
Sbjct: 290 PGIWRYDVSGGSISSLPVEPDNAIIYAPHIAGDTLYAFVASTDGTNPVYSPAAPEPALSY 349

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +  +   G     L  D++      W+P G  ++     D      L+    +G     
Sbjct: 350 TLSSVPLTGGTWTALRNDTHSLFNALWAPDGSGVVVFGGDDPTKTQVLWLAS-DGSPAVE 408

Query: 431 INTPAYASDPQWVG 444
           + T       +W  
Sbjct: 409 LYTGTDLYAARWAP 422



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 97/287 (33%), Gaps = 48/287 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQI-----LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +  ++RDG   + +T           +     SP    + Y            L+ T  
Sbjct: 81  QIVRIERDGVTRKQITDEPPPAPDALAIVWFDVSPVDGTIVYVVQGVGAPP--LLVRTAA 138

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKD------EAMDIYSVDLQSNATER-LTN 299
           D + + + +    I +P  S +G    + V +D      +   IY++ +   A    L +
Sbjct: 139 DGSNRTVLSDNLYITSPLISPDGTTIAVGVSEDYERPGSQTPGIYALPIAGGAPRLILAD 198

Query: 300 TLFIN-----------ISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRI---SQ 343
               +            + ++SPD ++++  +     E  +L ++     DQ  +   + 
Sbjct: 199 IPATDPTTEGGDGRGFTAVAWSPDGTKLLANAYSLSVELCELAIVDVASGDQVYLGDRAA 258

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGE----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           + +++     WSP G  + F             I      G     L  +         P
Sbjct: 259 NLKSACTPAAWSPDGRTVLFNTGDPALALPDPGIWRYDVSGGSISSLPVE---------P 309

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
              ++I++    GDT    +    +G N   + +PA A +P     +
Sbjct: 310 D-NAIIYAPHIAGDTLYA-FVASTDGTN--PVYSPA-APEPALSYTL 351



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 51/127 (40%), Gaps = 10/127 (7%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEAS-----YFDPVWSP-QGDLIAFTKFSGEKFAIGVMKK 378
             Q+  ++ +G  +K+I+ +   +           SP  G ++   +  G    +     
Sbjct: 79  GGQIVRIERDGVTRKQITDEPPPAPDALAIVWFDVSPVDGTIVYVVQGVGAPPLLVRTAA 138

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSIDLNGRNETLINTP 434
           DGS   +L ++  + +P  SP G ++        ++ G     +Y++ + G    LI   
Sbjct: 139 DGSNRTVLSDNLYITSPLISPDGTTIAVGVSEDYERPGSQTPGIYALPIAGGAPRLILAD 198

Query: 435 AYASDPQ 441
             A+DP 
Sbjct: 199 IPATDPT 205


>gi|186685984|ref|YP_001869180.1| hypothetical protein Npun_R5946 [Nostoc punctiforme PCC 73102]
 gi|186468436|gb|ACC84237.1| WD40 domain protein beta Propeller [Nostoc punctiforme PCC 73102]
          Length = 174

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 5/142 (3%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISAS 308
           R  N  +  L P+ S  G+  +    +  + D+Y  D  +        L +   I    S
Sbjct: 35  RSLNSLASELNPQIS--GRYIVFITDRRGSQDVYMFDTVTRDLVDLLGLNSFDAIANHPS 92

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S D   IVF + R+G+  +++ +      + ++ + +A   +P  S  G  IAF   + 
Sbjct: 93  VSQDGRYIVFAASRQGRSAIFLYERETRQSRNLTSNLQAEVRNPTISADGSRIAFESSNN 152

Query: 369 EKFAIGVMKKDGSQERLLVEDS 390
            ++ + V  + G    +  E  
Sbjct: 153 GQWDVLVYDRYGRPLNIPQEPR 174



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 57/154 (37%), Gaps = 12/154 (7%)

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-- 342
           Y  D    +     N+L   ++   S     IVF +DR G + +Y+  +   D   +   
Sbjct: 28  YPFDPGGRSL----NSLASELNPQIS--GRYIVFITDRRGSQDVYMFDTVTRDLVDLLGL 81

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPS 400
              +A    P  S  G  I F      + AI + +++  Q R L  +   +   PT S  
Sbjct: 82  NSFDAIANHPSVSQDGRYIVFAASRQGRSAIFLYERETRQSRNLTSNLQAEVRNPTISAD 141

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           G  + F    +G     +Y  D  GR   +   P
Sbjct: 142 GSRIAFESSNNGQWDVLVY--DRYGRPLNIPQEP 173



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 53/124 (42%), Gaps = 6/124 (4%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRA 272
             P+ S   + + + T D      VY+ DT        +G  +F ++   P  S +G+  
Sbjct: 44  LNPQIS--GRYIVFIT-DRRGSQDVYMFDTVTRDLVDLLGLNSFDAIANHPSVSQDGRYI 100

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVM 331
           + +  +     I+  + ++  +  LT+ L   + + + S D S+I FES   G+  + V 
Sbjct: 101 VFAASRQGRSAIFLYERETRQSRNLTSNLQAEVRNPTISADGSRIAFESSNNGQWDVLVY 160

Query: 332 QSNG 335
              G
Sbjct: 161 DRYG 164



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 1/88 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S D I   P  S + + + +A         ++L +    ++     N ++ +  P  S
Sbjct: 81  LNSFDAIANHPSVSQDGRYIVFAASRQGRSA-IFLYERETRQSRNLTSNLQAEVRNPTIS 139

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT 294
           ++G R       +   D+   D      
Sbjct: 140 ADGSRIAFESSNNGQWDVLVYDRYGRPL 167


>gi|256839160|ref|ZP_05544670.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256740079|gb|EEU53403.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 490

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 66/209 (31%), Gaps = 48/209 (22%)

Query: 263 PRFSSNGKRALISVQK----------------DEAMDIYSVDLQSNATER---LTNTLFI 303
           P +  +GK    SV K                D A D+   D Q +       L++    
Sbjct: 225 PSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDSASDVVVYDTQKHEIVTSPLLSSEGAF 284

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD------------ 351
               ++SPD + + F S +  +           D   +S D     F             
Sbjct: 285 ETFPTFSPDGNTLYFCSAKA-RTMPKEYDQVRYDLCSVSFDPATRRFGTVVDTLYKASEI 343

Query: 352 ------PVWSPQGDLIAFTKFSGEKFAIGVMKKD---------GSQERLLVEDSNLQAP- 395
                 P  SP G  + +T      F+I     D          S         ++++  
Sbjct: 344 DKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLYMIDLSTLRSYPLEAANSDDVESYH 403

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +WS   R ++FS ++     ++L+   ++
Sbjct: 404 SWSSDSRWIVFSSRRMDGLYTRLFIAYID 432



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 49/142 (34%), Gaps = 25/142 (17%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM------DTRIDRAPKRIGNF--- 256
           L  S       P FSP+   + + +     + + Y            D A +R G     
Sbjct: 277 LLSSEGAFETFPTFSPDGNTLYFCSAKARTMPKEYDQVRYDLCSVSFDPATRRFGTVVDT 336

Query: 257 -------RSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLF 302
                     +  PR S +GK  L ++             D+Y +DL +  +  L     
Sbjct: 337 LYKASEIDKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLYMIDLSTLRSYPLEAANS 396

Query: 303 INIS--ASYSPDSSQIVFESDR 322
            ++    S+S DS  IVF S R
Sbjct: 397 DDVESYHSWSSDSRWIVFSSRR 418



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 59/220 (26%), Gaps = 46/220 (20%)

Query: 194 CVMDRDGANIRYLTPSRDQ---ILFEPRFSPNQQKVAYATYDDEDILR------------ 238
           C +  DG  +  L    DQ    L  P + P+ + VA++    +                
Sbjct: 199 CTLLIDGDKVEKLNTKTDQTLSPLVYPSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDS 258

Query: 239 -----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE---------AMDI 284
                VY            + +  +    P FS +G        K             D+
Sbjct: 259 ASDVVVYDTQKHEIVTSPLLSSEGAFETFPTFSPDGNTLYFCSAKARTMPKEYDQVRYDL 318

Query: 285 YSVDLQ------SNATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSN- 334
            SV             + L     I+ S      SPD   +++     G   ++   ++ 
Sbjct: 319 CSVSFDPATRRFGTVVDTLYKASEIDKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADL 378

Query: 335 ---GSDQKRISQDKEASY----FDPVWSPQGDLIAFTKFS 367
                   R    + A+         WS     I F+   
Sbjct: 379 YMIDLSTLRSYPLEAANSDDVESYHSWSSDSRWIVFSSRR 418



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 59/194 (30%)

Query: 307 ASYSPDSSQIVFE----------SDR------EGKEQLYVMQSNGSD--QKRISQDKEAS 348
            S+ P    + F           +DR      +    + V  +   +     +   + A 
Sbjct: 225 PSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDSASDVVVYDTQKHEIVTSPLLSSEGAF 284

Query: 349 YFDPVWSPQGDLIAFTK---------FSGEKFAIGVMKKD------GSQERLLVE----D 389
              P +SP G+ + F           +   ++ +  +  D      G+    L +    D
Sbjct: 285 ETFPTFSPDGNTLYFCSAKARTMPKEYDQVRYDLCSVSFDPATRRFGTVVDTLYKASEID 344

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTG-----SKLYSIDLNGRNETLINTP---------- 434
            ++  P  SP G+ L+++    G+       + LY IDL+    TL + P          
Sbjct: 345 KSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLYMIDLS----TLRSYPLEAANSDDVE 400

Query: 435 ---AYASDPQWVGF 445
              +++SD +W+ F
Sbjct: 401 SYHSWSSDSRWIVF 414


>gi|255012425|ref|ZP_05284551.1| hypothetical protein B2_00822 [Bacteroides sp. 2_1_7]
          Length = 477

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 66/209 (31%), Gaps = 48/209 (22%)

Query: 263 PRFSSNGKRALISVQK----------------DEAMDIYSVDLQSNATER---LTNTLFI 303
           P +  +GK    SV K                D A D+   D Q +       L++    
Sbjct: 212 PSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDSASDVVVYDTQKHEIVTSPLLSSEGAF 271

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD------------ 351
               ++SPD + + F S +  +           D   +S D     F             
Sbjct: 272 ETFPTFSPDGNTLYFCSAKA-RTMPKEYDQVRYDLCSVSFDPATRRFGTVVDTLYKASEI 330

Query: 352 ------PVWSPQGDLIAFTKFSGEKFAIGVMKKD---------GSQERLLVEDSNLQAP- 395
                 P  SP G  + +T      F+I     D          S         ++++  
Sbjct: 331 DKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLYMIDLSTLRSYPLEAANSDDVESYH 390

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +WS   R ++FS ++     ++L+   ++
Sbjct: 391 SWSSDSRWIVFSSRRMDGLYTRLFIAYID 419



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 49/142 (34%), Gaps = 25/142 (17%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM------DTRIDRAPKRIGNF--- 256
           L  S       P FSP+   + + +     + + Y            D A +R G     
Sbjct: 264 LLSSEGAFETFPTFSPDGNTLYFCSAKARTMPKEYDQVRYDLCSVSFDPATRRFGTVVDT 323

Query: 257 -------RSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLF 302
                     +  PR S +GK  L ++             D+Y +DL +  +  L     
Sbjct: 324 LYKASEIDKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLYMIDLSTLRSYPLEAANS 383

Query: 303 INIS--ASYSPDSSQIVFESDR 322
            ++    S+S DS  IVF S R
Sbjct: 384 DDVESYHSWSSDSRWIVFSSRR 405



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 59/220 (26%), Gaps = 46/220 (20%)

Query: 194 CVMDRDGANIRYLTPSRDQ---ILFEPRFSPNQQKVAYATYDDEDILR------------ 238
           C +  DG  +  L    DQ    L  P + P+ + VA++    +                
Sbjct: 186 CTLLIDGDKVEKLNTKTDQTLSPLVYPSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDS 245

Query: 239 -----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE---------AMDI 284
                VY            + +  +    P FS +G        K             D+
Sbjct: 246 ASDVVVYDTQKHEIVTSPLLSSEGAFETFPTFSPDGNTLYFCSAKARTMPKEYDQVRYDL 305

Query: 285 YSVDLQ------SNATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSN- 334
            SV             + L     I+ S      SPD   +++     G   ++   ++ 
Sbjct: 306 CSVSFDPATRRFGTVVDTLYKASEIDKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADL 365

Query: 335 ---GSDQKRISQDKEASY----FDPVWSPQGDLIAFTKFS 367
                   R    + A+         WS     I F+   
Sbjct: 366 YMIDLSTLRSYPLEAANSDDVESYHSWSSDSRWIVFSSRR 405



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 59/194 (30%)

Query: 307 ASYSPDSSQIVFE----------SDR------EGKEQLYVMQSNGSD--QKRISQDKEAS 348
            S+ P    + F           +DR      +    + V  +   +     +   + A 
Sbjct: 212 PSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDSASDVVVYDTQKHEIVTSPLLSSEGAF 271

Query: 349 YFDPVWSPQGDLIAFTK---------FSGEKFAIGVMKKD------GSQERLLVE----D 389
              P +SP G+ + F           +   ++ +  +  D      G+    L +    D
Sbjct: 272 ETFPTFSPDGNTLYFCSAKARTMPKEYDQVRYDLCSVSFDPATRRFGTVVDTLYKASEID 331

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTG-----SKLYSIDLNGRNETLINTP---------- 434
            ++  P  SP G+ L+++    G+       + LY IDL+    TL + P          
Sbjct: 332 KSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLYMIDLS----TLRSYPLEAANSDDVE 387

Query: 435 ---AYASDPQWVGF 445
              +++SD +W+ F
Sbjct: 388 SYHSWSSDSRWIVF 401


>gi|158521521|ref|YP_001529391.1| WD40 domain-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158510347|gb|ABW67314.1| WD40 domain protein beta Propeller [Desulfococcus oleovorans Hxd3]
          Length = 534

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 81/220 (36%), Gaps = 27/220 (12%)

Query: 193 LCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           + + DR+  NIR L      D +   P +S +++++ +   +  + +   L + +     
Sbjct: 310 IGIYDRETGNIRLLPGADDYDLVHANPVWSMDEKEIVFCRTETRNEVHADLTNVKTIMET 369

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINISA 307
           + I                  AL  ++ D     ++ D +      L   +N    N  A
Sbjct: 370 RSIQELN--------------ALYPMRFDLYRVPFN-DGEGGRPVPLEGASNNNASNYFA 414

Query: 308 SYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +SPD   IVF     G       +L+++ + G   ++++ ++        WS  G  + 
Sbjct: 415 RFSPDGKWIVFTKSPYGIMLQPDSELWIVPAAGGTARKMNCNRGNFNSWHSWSSNGRWLL 474

Query: 363 FTKFSGEKF-AIGVMKKD-GSQERLLVEDSNLQAPTWSPS 400
           F+  +   +  I +   D    +   V  +    P ++ +
Sbjct: 475 FSSKANTPYTEIFLTHVDENGNDTAPVMLTRFNEPGFAAN 514



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 52/301 (17%), Positives = 96/301 (31%), Gaps = 80/301 (26%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-----IGNFRSMILAP-------RF 265
            FS + + ++       D    +++ T  +   ++       +F    L P       R 
Sbjct: 215 AFSSDGKYMSMEYNYGNDGGAQFIVKTASEIVVEKEDFFTWSDFPKSGLLPPTRGLFGRM 274

Query: 266 SSNGKRALISVQKDEAMDIY-----------------SVDLQSNATERLTNTLFIN---I 305
           S +G+ A  SV +     +                    D ++     L      +    
Sbjct: 275 SPSGRYAAASVNEISFATVMDDLDFCQLFFPTYGVIGIYDRETGNIRLLPGADDYDLVHA 334

Query: 306 SASYSPDSSQIVFESDREGKE----------------------------QLYVMQSNGSD 337
           +  +S D  +IVF       E                             LY +  N  +
Sbjct: 335 NPVWSMDEKEIVFCRTETRNEVHADLTNVKTIMETRSIQELNALYPMRFDLYRVPFNDGE 394

Query: 338 QKRI-----SQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVMKKDGSQERLLV 387
             R      + +  AS +   +SP G  I FTK            + ++   G   R + 
Sbjct: 395 GGRPVPLEGASNNNASNYFARFSPDGKWIVFTKSPYGIMLQPDSELWIVPAAGGTARKMN 454

Query: 388 -EDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYS--IDLNGRNE-----TLINTPAYAS 438
               N  +  +WS +GR L+FS  K     ++++   +D NG +      T  N P +A+
Sbjct: 455 CNRGNFNSWHSWSSNGRWLLFSS-KANTPYTEIFLTHVDENGNDTAPVMLTRFNEPGFAA 513

Query: 439 D 439
           +
Sbjct: 514 N 514



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 12/86 (13%), Positives = 29/86 (33%), Gaps = 6/86 (6%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              + L ++   G   R +  +R        +S N + + +++  +     ++L     +
Sbjct: 435 QPDSELWIVPAAGGTARKMNCNRGNFNSWHSWSSNGRWLLFSSKANTPYTEIFLTHVDEN 494

Query: 248 RA---PKRIGNFRSMILA---PRFSS 267
                P  +  F     A   P F+ 
Sbjct: 495 GNDTAPVMLTRFNEPGFAANVPEFAP 520


>gi|119963772|ref|YP_947511.1| protease [Arthrobacter aurescens TC1]
 gi|119950631|gb|ABM09542.1| putative protease [Arthrobacter aurescens TC1]
          Length = 1180

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 67/193 (34%), Gaps = 23/193 (11%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G       + D    I+   L      R+++      +  ++PD   +V+ +      ++
Sbjct: 22  GDLVTFVAEDD----IWIAPLSGGRAWRVSSQQLPARNPRFTPDGKGLVWTTVVGTSPEV 77

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI---AFTKFSGEKFAIGVMKKDGSQERL 385
                +G   +++S    ++     ++P G+++   AF +          +  DG     
Sbjct: 78  VTADVDGGGYRQLSYFGHSTTKVKGFTPAGNVVVTSAFQQAESRHTHAYSLPLDGGAAVE 137

Query: 386 LVEDSNLQAPTWSP---SGRSLI-----------FSRKKDGDTGSKLYSIDLNGRNETLI 431
           L     ++A  + P     + ++           + R + G  G      D NG  E L+
Sbjct: 138 LPFGP-VEAVAFGPEIGDEKPVVLASVLSREPAWWKRYRGGTAGKLWIDADGNGEFERLL 196

Query: 432 N-TPAYASDPQWV 443
                  +DP W+
Sbjct: 197 PEVDGNLTDPLWI 209



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 91/284 (32%), Gaps = 33/284 (11%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R   V   +V+ + ++ + +    G    +   S+      PRF+P+ + + + T     
Sbjct: 16  RFPHVHGDLVTFVAEDDIWIAPLSGGRA-WRVSSQQLPARNPRFTPDGKGLVWTTV-VGT 73

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA---LISVQKDEAMDIYSVDLQSN 292
              V   D       +      S      F+  G           +      YS+ L   
Sbjct: 74  SPEVVTADVDGGGYRQLSYFGHSTTKVKGFTPAGNVVVTSAFQQAESRHTHAYSLPLDGG 133

Query: 293 ATERLTNTLFINISASYSP---DSSQIVFES-----------DREGKEQLYVMQSNG-SD 337
           A   L       +  ++ P   D   +V  S            R G      + ++G  +
Sbjct: 134 AAVELPFGPVEAV--AFGPEIGDEKPVVLASVLSREPAWWKRYRGGTAGKLWIDADGNGE 191

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +R+  + + +  DP+W      IAF         +  +  DGS  R   +  +      
Sbjct: 192 FERLLPEVDGNLTDPLWIQG--RIAFLSDHEGYGNLYSVLPDGSGLRRHTDHEDFYVRHA 249

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSI---DLNGRNETLINTPAYAS 438
           S  G  ++F      ++  +L+ I   D +     L  T   AS
Sbjct: 250 STDGTRVVF------ESAGELWLIASLDADAEPVKLNVTLGSAS 287



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 42/121 (34%), Gaps = 9/121 (7%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---TKF 366
           SPD   +   +       +++  +      R+    E S     WS     +A+      
Sbjct: 479 SPDGRWLAVGTSFG---DVFLADTAAGKLTRLVSVGEGSIDQLSWSSDSQWLAWSEPVTS 535

Query: 367 SGEKFAIGVMKK---DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            G +  + + +    D     +       ++P ++P G+ L F   +  D     +S DL
Sbjct: 536 FGSRSKLRIARPAEPDSGIIDVTDGRFCDESPRFTPDGKFLAFLSNRSFDPVYDGHSFDL 595

Query: 424 N 424
           +
Sbjct: 596 S 596



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 11/110 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---- 275
           SP+ + +A  T        V+L DT   +  + +      I    +SS+ +    S    
Sbjct: 479 SPDGRWLAVGT----SFGDVFLADTAAGKLTRLVSVGEGSIDQLSWSSDSQWLAWSEPVT 534

Query: 276 --VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
               + +       +  S   + +T+  F + S  ++PD   + F S+R 
Sbjct: 535 SFGSRSKLRIARPAEPDSGIID-VTDGRFCDESPRFTPDGKFLAFLSNRS 583



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 51/147 (34%), Gaps = 14/147 (9%)

Query: 218 RFSPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +S + Q +A+     ++     LR+       D     + + R    +PRF+ +GK   
Sbjct: 519 SWSSDSQWLAWSEPVTSFGSRSKLRI-ARPAEPDSGIIDVTDGRFCDESPRFTPDGKFLA 577

Query: 274 ISVQK--DEAMDIYSVDLQS-NATERLTNTLFINISASYSPD-----SSQIVFESDREGK 325
               +  D   D +S DL   +  +     L  +  + + P       +        +G 
Sbjct: 578 FLSNRSFDPVYDGHSFDLSFPSPIKPYMVALAADTPSPFGPSIDTLEDASPATTKSDDGD 637

Query: 326 EQLYVMQSNGSDQKRIS-QDKEASYFD 351
                + + G   + I+    + +Y D
Sbjct: 638 APAVRVDAEGLAHRVIAVPVPQGNYSD 664



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 43/131 (32%), Gaps = 21/131 (16%)

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-- 388
             +  S   R+             SP G  +A     G+ F   +      +   LV   
Sbjct: 455 TSAEDSADLRLDFPAPTRTSALEASPDGRWLAVGTSFGDVF---LADTAAGKLTRLVSVG 511

Query: 389 DSNLQAPTWSPSGRSLIFSR-------------KKDGDTGSKLYSIDLNGRNETLINTPA 435
           + ++   +WS   + L +S               +  +  S +  +  +GR      +P 
Sbjct: 512 EGSIDQLSWSSDSQWLAWSEPVTSFGSRSKLRIARPAEPDSGIIDV-TDGRF--CDESPR 568

Query: 436 YASDPQWVGFM 446
           +  D +++ F+
Sbjct: 569 FTPDGKFLAFL 579


>gi|241761639|ref|ZP_04759726.1| peptidase S9B dipeptidylpeptidase IV domain protein [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
 gi|241373947|gb|EER63480.1| peptidase S9B dipeptidylpeptidase IV domain protein [Zymomonas
           mobilis subsp. mobilis ATCC 10988]
          Length = 735

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 82/250 (32%), Gaps = 65/250 (26%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           ++ R   R+G    ++    +S +GK  L+ +  D    +Y   L   + +++T+T    
Sbjct: 98  KMRRERARVGGSLGIVSY-NWSPDGKTILVPLDGD----LYLASLD-GSVQQVTHTAATE 151

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------- 353
           + A  S     + F  D    + L+V+    + ++ +SQD   S                
Sbjct: 152 VDAQVSATGHYLSFVRD----QNLFVIDLKNNQEQALSQDGGGSLTWGSAEFVAQEEMSR 207

Query: 354 -----WSPQGDLIAFTKFSGEKFAI------------------------------GVMKK 378
                WSP    +A  +    +  I                               +M  
Sbjct: 208 TKGHWWSPDDSRLAVARVDESQVHIVTRAAIGANGTQTYQQRYPMAGTPNAKVELYLMNP 267

Query: 379 DGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           DGS  ++ V+  N          WSP  +SL   R+        L  +D +     L+ +
Sbjct: 268 DGS-RKVTVDLGNNDDIYLARVNWSPDSQSLYVQRESRDQQQLDLLKVDSHTGQSQLLFS 326

Query: 434 PAYASDPQWV 443
               S   W+
Sbjct: 327 ETSKS---WI 333



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 63/194 (32%), Gaps = 37/194 (19%)

Query: 251 KRIGNFRSMILAPR---FSSNGKRALISVQKDE---AMDIYSVDLQSNATERLTNTLFIN 304
           +   +      APR    S +G+ A +   + +     D++++D  +  +  L ++  + 
Sbjct: 29  RVFASPSLSGSAPRALSLSPDGRYATLLRSRPDDLNRYDLWAIDTTTGESRMLIDSKKVG 88

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             A  S                     ++    ++R             WSP G  I   
Sbjct: 89  SGAEIS---------------------EAEKMRRERARVGGSLGIVSYNWSPDGKTILV- 126

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                   + +   DGS +++    +       S +G  L F R ++      L+ IDL 
Sbjct: 127 ---PLDGDLYLASLDGSVQQVTHTAATEVDAQVSATGHYLSFVRDQN------LFVIDLK 177

Query: 425 GRNETLINTPAYAS 438
              E  ++     S
Sbjct: 178 NNQEQALSQDGGGS 191



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 74/233 (31%), Gaps = 35/233 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+  ++A A  D+  +  V       +        +                 ++  
Sbjct: 212 WWSPDDSRLAVARVDESQVHIVTRAAIGANGTQTYQQRYP----------------MAGT 255

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS-----ASYSPDSSQIVFESDREGKEQ--LYV 330
            +  +++Y ++   +   ++T  L  N        ++SPDS  +  + +   ++Q  L  
Sbjct: 256 PNAKVELYLMNPDGS--RKVTVDLGNNDDIYLARVNWSPDSQSLYVQRESRDQQQLDLLK 313

Query: 331 MQSNGSDQKRISQDKEASY----FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           + S+    + +  +   S+     D        LI  ++ SG +      K    +   L
Sbjct: 314 VDSHTGQSQLLFSETSKSWINLNNDLQILKDDSLIWASERSGYRHLYHWQK---GKWTTL 370

Query: 387 VEDSNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAY 436
            +   +         +   L F   K       LY ID  +      +    +
Sbjct: 371 TQGDWMTLGVVGLDQKKGLLYFLANKSTPIEQHLYVIDYHHPSEPRQLTEAGW 423


>gi|166365543|ref|YP_001657816.1| hypothetical protein MAE_28020 [Microcystis aeruginosa NIES-843]
 gi|166087916|dbj|BAG02624.1| hypothetical protein MAE_28020 [Microcystis aeruginosa NIES-843]
          Length = 178

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 55/144 (38%), Gaps = 3/144 (2%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSP 311
           N R     P  S +G+   +   +  +  +   DLQ+   + L        I  S S S 
Sbjct: 33  NSRYNDEKPALSGDGRWLALLSNRRGSNQMLLYDLQTKQYQALGGLYTGQEITDSPSLSQ 92

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
               + +    EG+  + +        + +SQ+      +P  SP G  + F      ++
Sbjct: 93  TGRYLAYVVIIEGRPVIALYDRITDRSELLSQNYRGWLRNPRLSPDGRYLVFESARRGQW 152

Query: 372 AIGVMKKDGSQERLLVEDSNLQAP 395
            + V+ +  + E  + + S +++P
Sbjct: 153 DVEVLDRGPNIELDIADGSPVESP 176



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 4/124 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           N+ + +   + S D   +   S+R G  Q+ +        + +      +     P  S 
Sbjct: 33  NSRYNDEKPALSGDGRWLALLSNRRGSNQMLLYDLQTKQYQALGGLYTGQEITDSPSLSQ 92

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  +A+      +  I +  +   +  LL ++    L+ P  SP GR L+F   + G  
Sbjct: 93  TGRYLAYVVIIEGRPVIALYDRITDRSELLSQNYRGWLRNPRLSPDGRYLVFESARRGQW 152

Query: 415 GSKL 418
             ++
Sbjct: 153 DVEV 156



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 51/119 (42%), Gaps = 2/119 (1%)

Query: 216 EPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +P  S + + +A  +     + + +Y + T+  +A   +   + +  +P  S  G+    
Sbjct: 40  KPALSGDGRWLALLSNRRGSNQMLLYDLQTKQYQALGGLYTGQEITDSPSLSQTGRYLAY 99

Query: 275 SVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            V  +    I   D  ++ +E L+ N      +   SPD   +VFES R G+  + V+ 
Sbjct: 100 VVIIEGRPVIALYDRITDRSELLSQNYRGWLRNPRLSPDGRYLVFESARRGQWDVEVLD 158



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 32/107 (29%), Gaps = 4/107 (3%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTW 397
           + +   +   P  S  G  +A          + +      Q + L           +P+ 
Sbjct: 31  TLNSRYNDEKPALSGDGRWLALLSNRRGSNQMLLYDLQTKQYQALGGLYTGQEITDSPSL 90

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           S +GR L +    +G     LY    +       N   +  +P+   
Sbjct: 91  SQTGRYLAYVVIIEGRPVIALYDRITDRSELLSQNYRGWLRNPRLSP 137


>gi|297155002|gb|ADI04714.1| transcriptional regulator, XRE family protein [Streptomyces
            bingchenggensis BCW-1]
          Length = 1279

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 113/345 (32%), Gaps = 57/345 (16%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKD-------------------------RKQIIGKKFFSSP 148
            GR +  G    +V  RLWDV                            + +      ++ 
Sbjct: 830  GRRLATGGSDYKV--RLWDVASPRDARPVKVLTGHTDAVTTVAFSPDGRTLSSGSTDATV 887

Query: 149  ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              W   A   + ++        G           ++V+G    +  + D  G        
Sbjct: 888  RRWAVTADGPARELAVLSGHTSGVGALAFSPDGRTLVTGSADQTARLWDLPG----PALT 943

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAPRFSS 267
                 ++   FSP+ + +A  +YD    +R++ L D R  R    +      + +  F  
Sbjct: 944  GHSSSVYSAAFSPDGRLLATGSYD--RNVRIWSLADMRGPRELPPLAGHTGPVNSVVFRP 1001

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQIVF 318
            +G+    S   D  + ++++D  S     L      ++  S         YSPD   +  
Sbjct: 1002 DGRVLA-SGSADGTVRLWALDA-SRRPRLL------DVLPSRVGHVNTIAYSPDGHTLA- 1052

Query: 319  ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVM 376
                EG  +L+ +      +   +  +  +    V+S  G  +A      +   + +   
Sbjct: 1053 TGGEEGTVRLWDVTDVRRPRPLAALRRAGAVDSVVFSHNGRTLAVGDRNRTASVWNLADR 1112

Query: 377  KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +  G    L+     +++  +SP  R+L    +   D   +L+ +
Sbjct: 1113 RHPGRLAVLVGHTDGVKSVAFSPDDRTLATGSE---DRTVRLWDL 1154



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 91/267 (34%), Gaps = 24/267 (8%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSR----------DQILFEPRFSPNQQKVAYATYDDEDI 236
           G  K +L V+ RDG  +  L+                +    FS + +K+A    D    
Sbjct: 738 GPGKGTLAVVARDGIRLWRLSDGHRLRRLAALEVSAAVTAVAFSRDGRKLATGHADHTVR 797

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNAT 294
           L          R          ++ A  F+ +G+R   +   D  + ++ V     +   
Sbjct: 798 LWAMPASGGRPRQLSAEAGPSGIVNAMAFAPDGRRLA-TGGSDYKVRLWDVASPRDARPV 856

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPV 353
           + LT       + ++SPD   +   S  +   + + + ++G  ++  +     +      
Sbjct: 857 KVLTGHTDAVTTVAFSPDGRTLSSGST-DATVRRWAVTADGPARELAVLSGHTSGVGALA 915

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +SP G  +             +    G    L    S++ +  +SP GR L        D
Sbjct: 916 FSPDGRTLVTGSADQTA---RLWDLPG--PALTGHSSSVYSAAFSPDGRLLATGSY---D 967

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDP 440
              +++S+  + R    +   A  + P
Sbjct: 968 RNVRIWSL-ADMRGPRELPPLAGHTGP 993



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 77/229 (33%), Gaps = 14/229 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLT---PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            SG    ++ +   D +    L    PSR   +    +SP+   +A       +   V L 
Sbjct: 1008 SGSADGTVRLWALDASRRPRLLDVLPSRVGHVNTIAYSPDGHTLA----TGGEEGTVRLW 1063

Query: 243  DTRIDRAPKRIGNFR--SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTN 299
            D    R P+ +   R    + +  FS NG+   +  +   A      D +       L  
Sbjct: 1064 DVTDVRRPRPLAALRRAGAVDSVVFSHNGRTLAVGDRNRTASVWNLADRRHPGRLAVLVG 1123

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQG 358
                  S ++SPD   +      +   +L+ +        R      A       ++P G
Sbjct: 1124 HTDGVKSVAFSPDDRTLA-TGSEDRTVRLWDLADPRHPVLRSRLSGYADGVMSVAFAPGG 1182

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
             ++A            +    G+QE  L+   N    T  +SP GR+L 
Sbjct: 1183 QMLAAASSDDTVRLYDIAGHGGAQELALLAGHNKPVDTLAFSPDGRTLA 1231



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 73/263 (27%), Gaps = 56/263 (21%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A          R  L+ T       ++   R ++    F+ +G     +   D  + ++
Sbjct: 608 LAAYRLSPTPEARGALLSTFATPYATQLTGRRIVVTTVAFAPDGSTLA-TGDADGTVRLW 666

Query: 286 SV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-------------------- 323
            V    +      L        + + SPD   +    +                      
Sbjct: 667 RVSDPHRPRELGALPRLAGPVRTVAVSPDGRLVAAGGEDGKVAVWDIGDVRRPRLVARLA 726

Query: 324 -------------GKEQLYVMQSNGSDQKRISQDKE----------ASYFDPVWSPQGDL 360
                        GK  L V+  +G    R+S              A+     +S  G  
Sbjct: 727 ADAGPVVGLGFGPGKGTLAVVARDGIRLWRLSDGHRLRRLAALEVSAAVTAVAFSRDGRK 786

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           +A T  +     +  M   G + R L         + A  ++P GR L        D   
Sbjct: 787 LA-TGHADHTVRLWAMPASGGRPRQLSAEAGPSGIVNAMAFAPDGRRLA---TGGSDYKV 842

Query: 417 KLYSI--DLNGRNETLINTPAYA 437
           +L+ +    + R   ++     A
Sbjct: 843 RLWDVASPRDARPVKVLTGHTDA 865


>gi|326446658|ref|ZP_08221392.1| hypothetical protein SclaA2_36567 [Streptomyces clavuligerus ATCC
            27064]
          Length = 1307

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 91/265 (34%), Gaps = 26/265 (9%)

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY-----LTPSRDQILFEPRFSPNQQKV 226
            DF    +F  +  +   +     V   D    R      +       ++   F+P+ + +
Sbjct: 974  DFVFGTVFSPDGRLLATVSQDRTVRLWDATAPRRRGPLAVLTGHTDNVYGAAFAPDGRTL 1033

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMD 283
            A  + D      V L D    R P R+         P    FS +G R L +   D  + 
Sbjct: 1034 ATTSEDQ----TVRLWDVTDPRRPGRLATLTGHRRNPEGVAFSPDG-RILATTSVDRTVR 1088

Query: 284  IYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            ++ VD    A   L   T       S  +SPD   +V   D +   +L+ + +    ++R
Sbjct: 1089 LWRVD-DRRAPRALAYFTAHRDHVRSVVFSPDGRTMVTAGD-DHTVRLWDLAAPERPRER 1146

Query: 341  -ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPT 396
             +            +   G ++A T    +   +  +   G    L V     S++    
Sbjct: 1147 AVLTRHSGGVSAVAFRSDGAVLA-TGSGDQTVRLWAVGGPGRPRELGVLSGHTSSVYGVA 1205

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSI 421
            ++P GR+L        D   +L+ +
Sbjct: 1206 FAPDGRTLA---TAGDDRTLRLWDV 1227



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 78/236 (33%), Gaps = 20/236 (8%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
             L  +       +        ++    F  + + +A A+ D      V L D  +     
Sbjct: 916  RLWDLTTPHPREQASLTGHPTMVISLSFRADGRALAAASQDH----SVRLWDLPLPA--- 968

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNATERLTNTLFINISASY 309
             +      +    FS +G+    +V +D  + ++  +   +      LT        A++
Sbjct: 969  -LAAHTDFVFGTVFSPDGRLLA-TVSQDRTVRLWDATAPRRRGPLAVLTGHTDNVYGAAF 1026

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +PD   +   S+ +      V       +         +     +SP G ++A T     
Sbjct: 1027 APDGRTLATTSEDQTVRLWDVTDPRRPGRLATLTGHRRNPEGVAFSPDGRILATTSVD-R 1085

Query: 370  KFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +  +  D    R L        ++++  +SP GR+++       D   +L+ +
Sbjct: 1086 TVRLWRVD-DRRAPRALAYFTAHRDHVRSVVFSPDGRTMV---TAGDDHTVRLWDL 1137



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 80/240 (33%), Gaps = 48/240 (20%)

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFIN 304
               +R G     + +  F+ +G+    +  +D+ + ++  DL +        LT  L   
Sbjct: 838  GERERPGGHTGSVWSVAFAPDGRSLA-TAGEDQTVRLW--DLTTPHPREQAGLTGHLRTV 894

Query: 305  ISASYSPDSSQIVF-------------------ESDREGKEQLYV---MQSNGSDQKRIS 342
             + +++PD   +                     ++   G   + +    +++G      S
Sbjct: 895  YAVAFAPDGRSLATAGEDQTVRLWDLTTPHPREQASLTGHPTMVISLSFRADGRALAAAS 954

Query: 343  QDKEASY---------------FDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERL 385
            QD                    F  V+SP G L+A          +     ++ G    L
Sbjct: 955  QDHSVRLWDLPLPALAAHTDFVFGTVFSPDGRLLATVSQDRTVRLWDATAPRRRGPLAVL 1014

Query: 386  LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
                 N+    ++P GR+L  + +   D   +L+ +    R   L     +  +P+ V F
Sbjct: 1015 TGHTDNVYGAAFAPDGRTLATTSE---DQTVRLWDVTDPRRPGRLATLTGHRRNPEGVAF 1071



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 64/217 (29%), Gaps = 30/217 (13%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLW V DR+      +F+        AH   D +   +    G         +       
Sbjct: 1088 RLWRVDDRRAPRALAYFT--------AHR--DHVRSVVFSPDGR--------TMVTAGDD 1129

Query: 189  IKNSLC-VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L  +   +    R +       +    F  +   +A  + D      V L      
Sbjct: 1130 HTVRLWDLAAPERPRERAVLTRHSGGVSAVAFRSDGAVLATGSGDQ----TVRLWAVGGP 1185

Query: 248  RAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLF 302
              P+ +G       +     F+ +G+    +   D  + ++ V     A ER  LT    
Sbjct: 1186 GRPRELGVLSGHTSSVYGVAFAPDGRTLA-TAGDDRTLRLWDVTRPERARERAVLTGHTD 1244

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                 +++ D   +   S R+G   L+         +
Sbjct: 1245 RLHRVAFAADGHTVA-TSSRDGTALLWETDVRTVAAR 1280


>gi|159463802|ref|XP_001690131.1| flagellar associated protein [Chlamydomonas reinhardtii]
 gi|158284119|gb|EDP09869.1| flagellar associated protein [Chlamydomonas reinhardtii]
          Length = 1265

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 85/226 (37%), Gaps = 11/226 (4%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G    ++ +   D   +  +       +   RFSP  + +A + +D      V L D  
Sbjct: 1038 TGSNSKAVRLYAADSGALLAVLEGHQFFVQCVRFSPCGRYLASSGWDG----LVLLWDVA 1093

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +    +      +L   +S + +       ++D  + ++SVD ++     L       
Sbjct: 1094 SGQQAAALEGHTDRVLGLAWSPDSRLLASCGYEEDRTVKLWSVDGRTCFAT-LREHGAAV 1152

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             + ++SP+   +       G + + +            +D + +  D  WSP  D +A  
Sbjct: 1153 HNVAFSPNGRVLASC----GGDGVRLYDVATRVCTAKLEDFDGAVMDVAWSPNSDELACA 1208

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRK 409
              +G    I  +++ G++  +L   S  +    WSP G+++    K
Sbjct: 1209 ADTGLCVDIRNVQRGGARVAVLQGPSAAVTGVAWSPDGKAVACCSK 1254



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 75/245 (30%), Gaps = 24/245 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY--ATYDDEDILRV 239
           +S+ SG    ++ V D          P +   +    +S + +++A      D ED   V
Sbjct: 750 QSIASGANDQTIRVWDVAAGTCIATLPPQGFKVSTVAWSRDGRRLASGGGYMDVEDT-SV 808

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D    +    +      +    FS +G     S   D  + ++S+   +     L +
Sbjct: 809 VVWDVAAAQPEAILVGHEMHVDGVAFSPDGAVLA-SASHDATVRLWSLP-DAQLLTVLHH 866

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 + ++S D   +   S     + L ++           +      FD  WSP   
Sbjct: 867 HSQPVTAVAWSRDGRTLATSS---WDKTLALVDVASGQVAATLEGHMNLPFDCKWSPDNK 923

Query: 360 LIAFTKFSGEKFAIGVMK---------------KDGSQERLLVEDSNLQAPTWSPSGRSL 404
            +A    SG K  I  +                        +     + A  WSP G  L
Sbjct: 924 SLASCGKSG-KCRIWTIPELATPAAAAAADAKSAAAIASAGVGHSQAVLAVAWSPDGTRL 982

Query: 405 IFSRK 409
             +  
Sbjct: 983 ASASS 987



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/243 (12%), Positives = 78/243 (32%), Gaps = 22/243 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D             ++ +    +S + Q +A    D      + + D  
Sbjct: 712 SGGEDKAVRLWDAVSGECVAALQGHEEDVNAVAWSADGQSIASGANDQ----TIRVWDVA 767

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKDEAMDIYSVDLQSNATERLTNTL 301
                  +      +    +S +G+R          +D ++ ++ V         + + +
Sbjct: 768 AGTCIATLPPQGFKVSTVAWSRDGRRLASGGGYMDVEDTSVVVWDVAAAQPEAILVGHEM 827

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            ++  A +SPD + +   S       + +     +    +            WS  G  +
Sbjct: 828 HVDGVA-FSPDGAVLASASH---DATVRLWSLPDAQLLTVLHHHSQPVTAVAWSRDGRTL 883

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKL 418
           A + +      + ++     Q    +E  ++  P    WSP  +SL            ++
Sbjct: 884 ATSSWDKT---LALVDVASGQVAATLE-GHMNLPFDCKWSPDNKSLA---SCGKSGKCRI 936

Query: 419 YSI 421
           ++I
Sbjct: 937 WTI 939



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 78/246 (31%), Gaps = 26/246 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P    +     +SP+   +A A++D      + L DT        +           +S
Sbjct: 649 CPGHTGVSACVSWSPDGATLASASWDG----TLRLFDTGSGECIAVLLGHEGKAKCVEWS 704

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGK 325
            +G+    S  +D+A+ ++  D  S            +++A ++S D   I         
Sbjct: 705 PSGRMLA-SGGEDKAVRLW--DAVSGECVAALQGHEEDVNAVAWSADGQSIA---SGAND 758

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFSGEKFAIGVMKKDGS 381
           + + V              +        WS  G  +A    +         +  +     
Sbjct: 759 QTIRVWDVAAGTCIATLPPQGFKVSTVAWSRDGRRLASGGGYMDVEDTSVVVWDVAAAQP 818

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP- 440
           +  L+  + ++    +SP G  L  +     D   +L+S+     +  L+    + S P 
Sbjct: 819 EAILVGHEMHVDGVAFSPDGAVLASASH---DATVRLWSLP----DAQLLTVLHHHSQPV 871

Query: 441 ---QWV 443
               W 
Sbjct: 872 TAVAWS 877



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 81/233 (34%), Gaps = 22/233 (9%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ + +A  T  +   +R+Y  D+        +   +  +   RFS  G+    S  
Sbjct: 1028 AFSPDGKLLA--TGSNSKAVRLYAADS--GALLAVLEGHQFFVQCVRFSPCGRYLA-SSG 1082

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV---FESDREGKEQLYVMQSN 334
             D  + ++ V         L       +  ++SPDS  +    +E DR     + +   +
Sbjct: 1083 WDGLVLLWDV-ASGQQAAALEGHTDRVLGLAWSPDSRLLASCGYEEDRT----VKLWSVD 1137

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSNL 392
            G       ++  A+  +  +SP G ++A     G    + +          +L   D  +
Sbjct: 1138 GRTCFATLREHGAAVHNVAFSPNGRVLASCGGDG----VRLYDVATRVCTAKLEDFDGAV 1193

Query: 393  QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
                WSP+   L  +          + ++   G    ++  P+ A     W  
Sbjct: 1194 MDVAWSPNSDELACAADTG--LCVDIRNVQRGGARVAVLQGPSAAVTGVAWSP 1244



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 67/205 (32%), Gaps = 29/205 (14%)

Query: 116  VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
            +   G D L +   LWDV   +Q    +            HT        + G     +S
Sbjct: 1078 LASSGWDGLVL---LWDVASGQQAAALE-----------GHT------DRVLGLAWSPDS 1117

Query: 176  RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            R+L    +        ++ +   DG             +    FSPN + +A       D
Sbjct: 1118 RLL----ASCGYEEDRTVKLWSVDGRTCFATLREHGAAVHNVAFSPNGRVLASC---GGD 1170

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             +R+Y + TR+     ++ +F   ++   +S N      +      +DI +V        
Sbjct: 1171 GVRLYDVATRV--CTAKLEDFDGAVMDVAWSPNSDELACAADTGLCVDIRNVQRGGARVA 1228

Query: 296  RLTNTLFINISASYSPDSSQIVFES 320
             L          ++SPD   +   S
Sbjct: 1229 VLQGPSAAVTGVAWSPDGKAVACCS 1253



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 53/379 (13%), Positives = 117/379 (30%), Gaps = 58/379 (15%)

Query: 114  GRVIKEGKDRLRVE---FRLWDVKDRKQ---IIGKKFFSSPASWRKIAHTISDDIYQSIT 167
            GR +  G   + VE     +WDV   +    ++G +      ++      ++   + +  
Sbjct: 791  GRRLASGGGYMDVEDTSVVVWDVAAAQPEAILVGHEMHVDGVAFSPDGAVLASASHDATV 850

Query: 168  GEKGDFNSRILFVSE----------------SVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
                  ++++L V                  ++ +     +L ++D     +        
Sbjct: 851  RLWSLPDAQLLTVLHHHSQPVTAVAWSRDGRTLATSSWDKTLALVDVASGQVAATLEGHM 910

Query: 212  QILFEPRFSPNQQKVAYATYDDE-----------DILRVYLMDTRIDRAPKRIGNFRSMI 260
             + F+ ++SP+ + +A      +                                    +
Sbjct: 911  NLPFDCKWSPDNKSLASCGKSGKCRIWTIPELATPAAAAAADAKSAAAIASAGVGHSQAV 970

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINI------------SA 307
            LA  +S +G R   S   D    ++    +S     RL                    S 
Sbjct: 971  LAVAWSPDGTRLA-SASSDATARVWE--ARSGVCSLRLEAGAAEGGAEEHGARQTSVNSV 1027

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            ++SPD   +   S+    + + +  ++      + +  +       +SP G  +A + + 
Sbjct: 1028 AFSPDGKLLATGSN---SKAVRLYAADSGALLAVLEGHQFFVQCVRFSPCGRYLASSGWD 1084

Query: 368  GEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            G    + +      Q+   +E    +     WSP  R L  S   + D   KL+S+D   
Sbjct: 1085 G---LVLLWDVASGQQAAALEGHTDRVLGLAWSPDSRLLA-SCGYEEDRTVKLWSVDGRT 1140

Query: 426  RNETLINTPAYASDPQWVG 444
               TL    A   +  +  
Sbjct: 1141 CFATLREHGAAVHNVAFSP 1159



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 70/191 (36%), Gaps = 12/191 (6%)

Query: 173  FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            F+    +++ S   G+    + + D                +    +SP+ + +A   Y+
Sbjct: 1071 FSPCGRYLASSGWDGL----VLLWDVASGQQAAALEGHTDRVLGLAWSPDSRLLASCGYE 1126

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            ++  ++++ +D R       +    + +    FS NG+             +   D+ + 
Sbjct: 1127 EDRTVKLWSVDGRT--CFATLREHGAAVHNVAFSPNGRVLA----SCGGDGVRLYDVATR 1180

Query: 293  ATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                +L +     +  ++SP+S ++   +D      +  +   G  +  + Q   A+   
Sbjct: 1181 VCTAKLEDFDGAVMDVAWSPNSDELACAADTGLCVDIRNV-QRGGARVAVLQGPSAAVTG 1239

Query: 352  PVWSPQGDLIA 362
              WSP G  +A
Sbjct: 1240 VAWSPDGKAVA 1250


>gi|332665385|ref|YP_004448173.1| Dipeptidyl-peptidase IV [Haliscomenobacter hydrossis DSM 1100]
 gi|332334199|gb|AEE51300.1| Dipeptidyl-peptidase IV [Haliscomenobacter hydrossis DSM 1100]
          Length = 759

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 60/480 (12%), Positives = 159/480 (33%), Gaps = 75/480 (15%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE--V 68
            N    L L +V           +  ++      +SP S+    F +      ++    +
Sbjct: 2   FNRFFFLALTIVSFSTLNAQKAISLEEI-WKKYTFSPRSVPGFSFQNDGRHYTRLDRNKI 60

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ--DWNSLGAQVLVTGRVIKEGKDRLRV 126
           V +DL  +      +  +         +  +     +++  +++L++  V    +   R 
Sbjct: 61  VQQDLT-TG-----ATTATILDPATLSTNVQIDEYQFSADESKILLSTGVEPIYRHSSRA 114

Query: 127 EFRLWDVKDRKQII-----GKKFFSSPA-SWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
            F ++D +++KQ+      GK  +++ +    K+A    +++Y      K   + +   V
Sbjct: 115 NFYVYD-RNQKQLSPLFAEGKTMYATFSPKADKVAFVFKNNLYY-----KDLISGKTTQV 168

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +       I N             ++      +     +SP+   +A+  +D++++    
Sbjct: 169 TSDGAVNAIIN---------GATDWVYEEEFSMDCGFSWSPDGGNLAFYRFDEQEVPEFT 219

Query: 241 LMDTRIDRAPKRIG-----------------------------NFRSMILAPR--FSSNG 269
           L +      P  +                                 +    PR  ++++ 
Sbjct: 220 LTNFETGMYPDYVTFKYPKVGEKNSKVSIHIHNLASGRSIKTDTDPATEYIPRIKWTNDP 279

Query: 270 KRA-LISVQKDEA-MDIYSVDLQSNATERLTNTLF-----INISASYSPDSSQIVFESDR 322
            +  +  + + +  +D+   D  +  T  L          I+ + ++  D    ++ S+ 
Sbjct: 280 NKLSIFLLNRHQNQLDLVLADAATGKTTLLLQEDSKYYVDIHDNLTFLQDGKHFLWTSEM 339

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDG 380
           +G   LY+    G+  ++I+  K           +   + F  T+ S  +  +  +  +G
Sbjct: 340 DGWNHLYLYDLTGNMVRQITSGKWELSNFYGIDEKSSTLYFQSTESSPLERQVYQIDLEG 399

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASD 439
             ++ L  D       +SP      +  +         Y++ D  G    +I    +  +
Sbjct: 400 KNKKALFADKGWANAQFSP--TFQYYVIEHSTANAPSTYTVFDQKGSKVRVIEDNVFVKN 457


>gi|53712144|ref|YP_098136.1| hypothetical protein BF0851 [Bacteroides fragilis YCH46]
 gi|52215009|dbj|BAD47602.1| hypothetical protein [Bacteroides fragilis YCH46]
          Length = 505

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 45/211 (21%)

Query: 263 PRFSSNGKRALISVQK-------DEAMDIYSVDLQS-------NATERLTN----TLFIN 304
           P +  +G+    SV K            I   D  S        +   LT     T    
Sbjct: 242 PYWHPSGEYIAYSVNKTNQAFHLGGKKPIEVFDQASDVVVYHPRSHRILTTPLLSTASFE 301

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQS------------NGSDQKRISQDKEA----- 347
              ++SPD   + F S  + +  +                 +G+   RI     A     
Sbjct: 302 TFPAFSPDGRTLYFCSAEQKEMPVRYKDVKYSLCSIAFHPEDGTFGDRIDTLISARTLDK 361

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAI-------GVMKKDGSQERLLVEDSNLQAPT---W 397
           S   P  S  G  + FT      F+I        ++       R L E ++    +   W
Sbjct: 362 SISFPKPSFDGKYLMFTLSDYGNFSIWHKEADLWLLDLKTGTYRNLEEVNSDDTESYHNW 421

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           S +    +FS ++     ++LY   ++G+  
Sbjct: 422 SSNSHWFVFSSRRGDGLYTRLYISSVDGQGR 452



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 54/157 (34%), Gaps = 27/157 (17%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGNFRS 258
           S       P FSP+ + + + + + +++   Y                     RI    S
Sbjct: 296 STASFETFPAFSPDGRTLYFCSAEQKEMPVRYKDVKYSLCSIAFHPEDGTFGDRIDTLIS 355

Query: 259 ------MILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLFINI 305
                  I  P+ S +GK  + ++             D++ +DL++     L      + 
Sbjct: 356 ARTLDKSISFPKPSFDGKYLMFTLSDYGNFSIWHKEADLWLLDLKTGTYRNLEEVNSDDT 415

Query: 306 S--ASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQ 338
               ++S +S   VF S R      +LY+   +G  +
Sbjct: 416 ESYHNWSSNSHWFVFSSRRGDGLYTRLYISSVDGQGR 452


>gi|260592830|ref|ZP_05858288.1| prolyl oligopeptidase family protein [Prevotella veroralis F0319]
 gi|260535200|gb|EEX17817.1| prolyl oligopeptidase family protein [Prevotella veroralis F0319]
          Length = 720

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/333 (13%), Positives = 99/333 (29%), Gaps = 85/333 (25%)

Query: 144 FFSSPASWRKIAHTI-SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           +        ++   + +D     +        S ++++    ++ +    L  M  DG+N
Sbjct: 69  YSVKENRGHQVIRIMDADGKNDKLLTTSAKSESDVVWLDNRTLAFLTDGQLWTMSIDGSN 128

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN------- 255
              LT S D  +   RFSP++++V                D         I +       
Sbjct: 129 RHQLTHS-DIAIEGFRFSPDKKRVVLVKSIPYHGTIKENPDDLPKATGMLITDMNYRHWD 187

Query: 256 -FRSMILAP-----------------------------------RFSSNGKRALISVQKD 279
            + +    P                                    +S++ K    + +K 
Sbjct: 188 HYVTSNAHPFVANVTANGVDAGKDILEGEPYESPMAPFGGIEQIDWSTDSKSVAYTCRKK 247

Query: 280 EAM--------DIYSVDLQSNATERL-------------TNTL--------------FIN 304
           E          DIY  ++++  T  L             T ++                +
Sbjct: 248 EGTQYAISTDADIYIYNVETGKTTNLCKPADYVEPKIDATKSMRDQAVNHQSGDFNVGYD 307

Query: 305 ISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           ++  +SPD   I ++S  R G    + +L V +     +  +++  +++  D  WS    
Sbjct: 308 VNPKFSPDGKYIAWQSMKRNGYESDRNRLCVYELATGRKTYVTESFDSNVDDYTWSADSK 367

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            + F         +      G+  +L   D N 
Sbjct: 368 SLYFIGVWHATVNVYQTNLKGAVRQLTKGDHNY 400



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 76/242 (31%), Gaps = 64/242 (26%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I + + S +GK+    V      +      I  +D      + LT +        +  
Sbjct: 48  GRIGSAQASPDGKKIAYQVGYYSVKENRGHQVIRIMDADGKNDKLLTTSAKSESDVVWL- 106

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------ 365
           D+  + F +D     QL+ M  +GS++ +++   + +     +SP    +   K      
Sbjct: 107 DNRTLAFLTD----GQLWTMSIDGSNRHQLTH-SDIAIEGFRFSPDKKRVVLVKSIPYHG 161

Query: 366 -------------------FSGEKFAIGVMKKDGSQERLLVEDSNL-----------QAP 395
                               +   +   V          +  +              ++P
Sbjct: 162 TIKENPDDLPKATGMLITDMNYRHWDHYVTSNAHPFVANVTANGVDAGKDILEGEPYESP 221

Query: 396 T----------WSPSGRSLIFS-RKKDGD-----TGSKLYSIDLNGRNETLINTPAYASD 439
                      WS   +S+ ++ RKK+G      T + +Y  ++     T +  PA   +
Sbjct: 222 MAPFGGIEQIDWSTDSKSVAYTCRKKEGTQYAISTDADIYIYNVETGKTTNLCKPADYVE 281

Query: 440 PQ 441
           P+
Sbjct: 282 PK 283



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 53/143 (37%), Gaps = 13/143 (9%)

Query: 258 SMILAPRFSSNGKRALI-SVQKDE----AMDIYSVDLQSNATERLTNTLFINISA-SYSP 311
              + P+FS +GK     S++++        +   +L +     +T +   N+   ++S 
Sbjct: 305 GYDVNPKFSPDGKYIAWQSMKRNGYESDRNRLCVYELATGRKTYVTESFDSNVDDYTWSA 364

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           DS  + F         +Y     G+  +++++  + +Y          L+   +   +  
Sbjct: 365 DSKSLYFIGVWHATVNVYQTNLKGA-VRQLTK-GDHNYVSIALLGNKQLLGIRQSISQPN 422

Query: 372 AIGVM-----KKDGSQERLLVED 389
            I  +       D  Q +L  E+
Sbjct: 423 EIYAITPSKGNADSQQTQLTFEN 445



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 5/113 (4%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY----DDEDILRVYLMDTRIDRAPKRI 253
           RD A               P+FSP+ + +A+ +      + D  R+ + +    R     
Sbjct: 291 RDQAVNHQSGDFNVGYDVNPKFSPDGKYIAWQSMKRNGYESDRNRLCVYELATGRKTYVT 350

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +F S +    +S++ K           +++Y  +L+  A  +LT      +S
Sbjct: 351 ESFDSNVDDYTWSADSKSLYFIGVWHATVNVYQTNLK-GAVRQLTKGDHNYVS 402



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/336 (13%), Positives = 90/336 (26%), Gaps = 96/336 (28%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        + +MD DG N + LT S            + + +A+ T      + +  
Sbjct: 69  YSVKENRGHQVIRIMDADGKNDKLLTTSAKSESDVVWL--DNRTLAFLTDGQLWTMSID- 125

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----------KDEAMDIYSVDLQS 291
                     ++ +    I   RFS + KR ++              D+      + +  
Sbjct: 126 -----GSNRHQLTHSDIAIEGFRFSPDKKRVVLVKSIPYHGTIKENPDDLPKATGMLITD 180

Query: 292 NATERLTNTLFINISAS-----------------------------------YSPDSSQI 316
                  + +  N                                       +S DS  +
Sbjct: 181 MNYRHWDHYVTSNAHPFVANVTANGVDAGKDILEGEPYESPMAPFGGIEQIDWSTDSKSV 240

Query: 317 VFE-SDREGKE-------QLYVMQSNGSDQKRISQDKEA--------------------- 347
            +    +EG +        +Y+          + +  +                      
Sbjct: 241 AYTCRKKEGTQYAISTDADIYIYNVETGKTTNLCKPADYVEPKIDATKSMRDQAVNHQSG 300

Query: 348 -----SYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAP 395
                   +P +SP G  IA+       +      + V +    ++  + E  DSN+   
Sbjct: 301 DFNVGYDVNPKFSPDGKYIAWQSMKRNGYESDRNRLCVYELATGRKTYVTESFDSNVDDY 360

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           TWS   +SL F           +Y  +L G    L 
Sbjct: 361 TWSADSKSLYFIGV--WHATVNVYQTNLKGAVRQLT 394



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 5/51 (9%)

Query: 398 SPSGRSLIF----SRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQWV 443
           SP G+ + +       K+      +  +D +G+N+ L+ T A + SD  W+
Sbjct: 56  SPDGKKIAYQVGYYSVKENRGHQVIRIMDADGKNDKLLTTSAKSESDVVWL 106


>gi|256829441|ref|YP_003158169.1| hypothetical protein Dbac_1661 [Desulfomicrobium baculatum DSM
           4028]
 gi|256578617|gb|ACU89753.1| hypothetical protein Dbac_1661 [Desulfomicrobium baculatum DSM
           4028]
          Length = 885

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/231 (21%), Positives = 92/231 (39%), Gaps = 39/231 (16%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           RDG  ++    S  +    P    +    AY    DE +  + +          +IG   
Sbjct: 646 RDGEELKPTMGSGYKFSVTP----DSAFYAYVAQVDESVRSMVING--------QIGPDF 693

Query: 258 SMILAPR-FSSNGKRALISVQKDEAMDIYS----VDLQSNATERLTNTLFINISASYSPD 312
           S I  P  FS++G+R + S +K++   +      V     A + + +        ++SPD
Sbjct: 694 SDIWDPATFSADGQRHIYSAKKEKESFLVVDGQIVSHGFGALKSVVDE-------TFSPD 746

Query: 313 SSQIV--FE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            S+    F+ SD E     YV+  +G +  R     + S    V+SP G  +A+ +    
Sbjct: 747 GSRWAAGFQLSDEE-----YVVVVDGKEIGR----GQGSPRGIVFSPDGTRVAWLEKQKT 797

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              I +  + G + R   +  + + P +SP GR L++  +   +    +  
Sbjct: 798 SARICLDGQAGPEAR---DIYDEEPPQFSPDGRHLVYFTRDRKEKKMHIVV 845



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 61/180 (33%), Gaps = 16/180 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            + P    I     FS + Q+  Y+   +++   V                    ++   
Sbjct: 688 QIGPDFSDIWDPATFSADGQRHIYSAKKEKESFLVVDGQIVSHGFGALKS-----VVDET 742

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G R     Q  +   +  VD      + +           +SPD +++ +   ++ 
Sbjct: 743 FSPDGSRWAAGFQLSDEEYVVVVDG-----KEIGRGQGSPRGIVFSPDGTRVAWLEKQKT 797

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +    G + + I          P +SP G  + +     ++  + ++   G +ER
Sbjct: 798 SARICLDGQAGPEARDI-----YDEEPPQFSPDGRHLVYFTRDRKEKKMHIVVF-GGEER 851



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 72/185 (38%), Gaps = 22/185 (11%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQ 290
                VY +     +  +   + R   +A     NGK A I   +D    A     V   
Sbjct: 553 GKTGSVYRVYLDGKQVRETNASVRDGAVAE----NGKAAWIERGQDPQTGAEFAMVVTAD 608

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            +  ++      I+ S  ++ + +++ + +++EG ++  V   +G + K        S +
Sbjct: 609 GSEGQK---YPAIHGSPRFTQNRAELYYIAEKEGGDRFLV--RDGEELK----PTMGSGY 659

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRK 409
               +P     A+     E     V+       ++  + S++  P T+S  G+  I+S K
Sbjct: 660 KFSVTPDSAFYAYVAQVDESVRSMVING-----QIGPDFSDIWDPATFSADGQRHIYSAK 714

Query: 410 KDGDT 414
           K+ ++
Sbjct: 715 KEKES 719


>gi|255007669|ref|ZP_05279795.1| hypothetical protein Bfra3_00939 [Bacteroides fragilis 3_1_12]
 gi|313145363|ref|ZP_07807556.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313134130|gb|EFR51490.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 486

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 79/249 (31%), Gaps = 48/249 (19%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-- 278
           P+   +            V  +    +    +     S  + P +  +G+    SV +  
Sbjct: 184 PDPSSL---HVRGGHGATVMTIGGESEFLDTKADGQLSACVYPYWHPSGEYIAYSVNRTN 240

Query: 279 --------------DEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDR 322
                         D+A D+     QS+   T  L +T       ++SPD   + F S  
Sbjct: 241 QTFHLGGKKPIEVFDQASDVVVYHPQSHRILTTPLLSTAAFETFPAFSPDGRTLYFCSAE 300

Query: 323 EGKE------------QLYVMQSNGSDQKRISQDKEA-----SYFDPVWSPQGDLIAFTK 365
           + +              +     +G+  +RI     A     S   P  S  G  + FT 
Sbjct: 301 QKEMPARYKEVKYSLCSIAFHPEDGTFGERIDTLISARTLDKSISFPKPSFDGKYLMFTL 360

Query: 366 FSGEKFAI-------GVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTG 415
                F+I        ++       R L E ++    +   WS +    +FS ++     
Sbjct: 361 SDYGNFSIWHKEADLWLLDLKTGAYRNLEEVNSDDTESYHNWSSNSHWFVFSSRRGDGLY 420

Query: 416 SKLYSIDLN 424
           ++LY   ++
Sbjct: 421 TRLYIASVD 429



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 58/160 (36%), Gaps = 29/160 (18%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGNFRS 258
           S       P FSP+ + + + + + +++   Y                    +RI    S
Sbjct: 277 STAAFETFPAFSPDGRTLYFCSAEQKEMPARYKEVKYSLCSIAFHPEDGTFGERIDTLIS 336

Query: 259 ------MILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLFINI 305
                  I  P+ S +GK  + ++             D++ +DL++ A   L      + 
Sbjct: 337 ARTLDKSISFPKPSFDGKYLMFTLSDYGNFSIWHKEADLWLLDLKTGAYRNLEEVNSDDT 396

Query: 306 S--ASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRI 341
               ++S +S   VF S R      +LY+   +  +Q RI
Sbjct: 397 ESYHNWSSNSHWFVFSSRRGDGLYTRLYIASVD--EQGRI 434


>gi|223935072|ref|ZP_03626991.1| hypothetical protein Cflav_PD5602 [bacterium Ellin514]
 gi|223896525|gb|EEF62967.1| hypothetical protein Cflav_PD5602 [bacterium Ellin514]
          Length = 1033

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 99/282 (35%), Gaps = 34/282 (12%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +N  I +   S  +G    S+  +D DGA   Y+T         PR S + Q +A+    
Sbjct: 600 YNGTIFYSRRSGTTG----SIWSIDLDGAGDDYITSG-----IRPRVSHDGQWMAFLREG 650

Query: 233 DEDILRVYLM-DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           +    +  +     +    +RI    + I++  +  +G   +I    D A  ++ + L  
Sbjct: 651 NPFAGQGNIWVRNLVSGLEQRILVNTNSIVSYDWDLSGTNLVI----DYACKLWRLGLNG 706

Query: 292 NATERLTNTLFINISASYSP-DSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASY 349
           +      N    +++   +P D     F  +       + V   + +     + +   + 
Sbjct: 707 SLALLPLNENCADVAPVVNPLDGRLAYFNLNPNALNPGISVTTPDLATGVHFNLNVFGA- 765

Query: 350 FDPVWSPQGDLIAFT-----KFSGEKFAIGVMKKDGSQERLLVE-----DSNLQAPTWSP 399
             P WSP G  + F          +   + ++  DG+    +       +       WSP
Sbjct: 766 SWPSWSPDGQNLVFVDSNDYSSVDKGTNLYLVHSDGTGVHQMTRLNAAPNGFPHGAIWSP 825

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNG-----RNETLINTPAY 436
           SG +L+ +   +G  G  LY + L           L  TP  
Sbjct: 826 SGDALVSAGTVNGTNG--LYVLPLFDDVCACTALRLPTTPGD 865



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 117/368 (31%), Gaps = 35/368 (9%)

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGK--DRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
           DSI  F   +   A+ +V             ++V F   +  D+             +W+
Sbjct: 475 DSISLFSYASPRPAEPVVVTITPPPASYPGPIQVSFSTLNASDK----VFYRTGPTNAWQ 530

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           + A T        +T +           + S  S +    L   +  G     +      
Sbjct: 531 QYAATF------QLTNDTTVQYYGTNSSANSRSSLVSAKYLLASNNKGPEQPLIVDPFAG 584

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
               P F+ NQ  ++Y                          ++ +  + PR S +G+  
Sbjct: 585 TNNPPIFNTNQVTISYNGTIFYSRRSGTTGSIWSIDLDGAGDDYITSGIRPRVSHDGQWM 644

Query: 273 LISVQKD---EAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQL 328
               + +      +I+  +L S   +R L NT  I +S  +    + +V     +   +L
Sbjct: 645 AFLREGNPFAGQGNIWVRNLVSGLEQRILVNTNSI-VSYDWDLSGTNLV----IDYACKL 699

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM----KKDGSQER 384
           + +  NGS    +  ++  +   PV +P    +A+   +      G+             
Sbjct: 700 WRLGLNGS-LALLPLNENCADVAPVVNPLDGRLAYFNLNPNALNPGISVTTPDLATGVHF 758

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKLYSIDLNGRN----ETLINTPAYA 437
            L        P+WSP G++L+F    D    D G+ LY +  +G        L   P   
Sbjct: 759 NL-NVFGASWPSWSPDGQNLVFVDSNDYSSVDKGTNLYLVHSDGTGVHQMTRLNAAPNGF 817

Query: 438 SDPQ-WVG 444
                W  
Sbjct: 818 PHGAIWSP 825


>gi|114569153|ref|YP_755833.1| peptidase S9 prolyl oligopeptidase [Maricaulis maris MCS10]
 gi|114339615|gb|ABI64895.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Maricaulis maris MCS10]
          Length = 653

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 9/177 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDR 322
            +S++  R LIS  +    + Y+VD  +   E LT++      A S+ P   + V  +D 
Sbjct: 62  AWSADDSRILISSDETGVFNAYAVDPSTGDREALTSSETDATFALSWFPTDDRAVVTADS 121

Query: 323 EGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAIGVMK- 377
            G E   ++V + +G     I+  +E       WSP G+   +   +       I     
Sbjct: 122 GGNEISHIFVRELDGR-LNDITPGEEVRAQFLGWSPDGNDMWLMTNERDQSAMDIYAYDT 180

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT 433
                  +   D  LQ    SP GR +   R +     S +  +DL +G  E  + T
Sbjct: 181 LSYESGFVFQNDDALQIGDVSPDGRWVALVRNRT-SADSDILLLDLASGETEPSVIT 236



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 87/248 (35%), Gaps = 22/248 (8%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D A     T           +S +  ++  ++ D+  +   Y +D           +   
Sbjct: 43  DAATFHQTTSFSLASSAGFAWSADDSRILISS-DETGVFNAYAVDPSTGDREALTSSETD 101

Query: 259 MILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTN-TLFINISAS---YSPD 312
              A  +     RA+++          I+  +L      RL + T    + A    +SPD
Sbjct: 102 ATFALSWFPTDDRAVVTADSGGNEISHIFVRELDG----RLNDITPGEEVRAQFLGWSPD 157

Query: 313 SSQIV-FESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGE 369
            + +    ++R+     +Y   +   +   + Q+ +A     V SP G  +A  +  +  
Sbjct: 158 GNDMWLMTNERDQSAMDIYAYDTLSYESGFVFQNDDALQIGDV-SPDGRWVALVRNRTSA 216

Query: 370 KFAIGVMKKDGSQE---RLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL- 423
              I ++     +     +   + N      T++P    L+++  + G+     ++ DL 
Sbjct: 217 DSDILLLDLASGETEPSVITAHEGNIAHGVYTFTPDSTQLVYATDQHGEFNQA-WTYDLA 275

Query: 424 NGRNETLI 431
           +G    LI
Sbjct: 276 DGTTAPLI 283



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 55/149 (36%), Gaps = 10/149 (6%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++S D S+I+  SD  G    Y +  +  D++ ++  +  + F   W P  D    T  S
Sbjct: 62  AWSADDSRILISSDETGVFNAYAVDPSTGDREALTSSETDATFALSWFPTDDRAVVTADS 121

Query: 368 GEK--FAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           G      I V + DG   +    E+   Q   WSP G  +     +   +   +Y+ D  
Sbjct: 122 GGNEISHIFVRELDGRLNDITPGEEVRAQFLGWSPDGNDMWLMTNERDQSAMDIYAYDTL 181

Query: 425 GRNETLINTPAYA-------SDPQWVGFM 446
                 +     A        D +WV  +
Sbjct: 182 SYESGFVFQNDDALQIGDVSPDGRWVALV 210



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 58/157 (36%), Gaps = 12/157 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P+  ++ YAT    +  + +  D         I     +     +S +G+  +  + 
Sbjct: 248 TFTPDSTQLVYATDQHGEFNQAWTYDLADGTTAPLIEADWDVQF-VIYSDSGRYQVSGIN 306

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKE-QLYVMQSNG 335
            D   ++  +D  S  T  L +    +IS+  +S D  +I F  +       ++V+    
Sbjct: 307 ADARTEVSILDTMSGETLALPDLPAGDISSVRFSRDEGRIAFLINSATSPSNIHVVDLAS 366

Query: 336 SDQKRISQDKEASYFDPVWSP----QGDLIAFTKFSG 368
               +++     +  +P  S        ++ F  F G
Sbjct: 367 QAHAQLT-----NALNPAISEAEMVDAQVVRFESFDG 398


>gi|325290655|ref|YP_004266836.1| Acylaminoacyl-peptidase [Syntrophobotulus glycolicus DSM 8271]
 gi|324966056|gb|ADY56835.1| Acylaminoacyl-peptidase [Syntrophobotulus glycolicus DSM 8271]
          Length = 647

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 57/152 (37%), Gaps = 30/152 (19%)

Query: 283 DIYSVDLQSNATERL----TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           ++  ++L+S     L    T   +   S  +S D  +I F S++ G  +L++ +      
Sbjct: 44  ELILLNLKSGEQAVLQDQTTGEPYGGHSPKWSEDGEKIAFLSNQNGVNELWLYRFAAGTA 103

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFS-----------------------GEKFAIGV 375
           + +    +   +   WSPQGD IA+                                + +
Sbjct: 104 QCLVPGVQVKDY--AWSPQGDKIAYITREQNRDSVCFQVRRLRYKLDGEGIPNGFDHVYL 161

Query: 376 MKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIF 406
           +  + ++  R+    S+ + P +S  GR L +
Sbjct: 162 VDVETAKLTRISTAASDHRCPVFSADGRRLAY 193



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 31/260 (11%), Positives = 77/260 (29%), Gaps = 55/260 (21%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMIL 261
           ++  T         P++S + +K+A+ +  +  + L +Y       +        +    
Sbjct: 58  LQDQTTGEPYGGHSPKWSEDGEKIAFLSNQNGVNELWLYRFAAGTAQCLVPGVQVKDY-- 115

Query: 262 APRFSSNGKRALISVQ-----------------------KDEAMDIYSVDLQSNATERLT 298
              +S  G +     +                        +    +Y VD+++    R++
Sbjct: 116 --AWSPQGDKIAYITREQNRDSVCFQVRRLRYKLDGEGIPNGFDHVYLVDVETAKLTRIS 173

Query: 299 NTLFINISASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                +    +S D  ++ +        D E + Q+ +       +  +S   + S    
Sbjct: 174 TAASDHRCPVFSADGRRLAYVVEFSDGDDLEKQPQIEIADLAQGQRSSLSPGAK-SISAL 232

Query: 353 VWSPQG----------------DLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQ 393
           +W                     L  F +  G ++ + V         +L +        
Sbjct: 233 LWVNDKFYGAGKKTTENSVEFDKLFVFEERKGLRW-LAVNLDVPVGYWVLSDVRRTGLNA 291

Query: 394 APTWSPSGRSLIFSRKKDGD 413
           A   S   R + F+  ++G 
Sbjct: 292 AVQISEDERQIFFAGTREGR 311



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 51/152 (33%), Gaps = 31/152 (20%)

Query: 326 EQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            +L ++     +Q  +   +  +      P WS  G+ IAF         + + +     
Sbjct: 43  SELILLNLKSGEQAVLQDQTTGEPYGGHSPKWSEDGEKIAFLSNQNGVNELWLYRFAAGT 102

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG---------------------SKLYSI 421
            + LV    ++   WSP G  + +  ++                            +Y +
Sbjct: 103 AQCLVPGVQVKDYAWSPQGDKIAYITREQNRDSVCFQVRRLRYKLDGEGIPNGFDHVYLV 162

Query: 422 DLNGRNETLINT-------PAYASDPQWVGFM 446
           D+     T I+T       P +++D + + ++
Sbjct: 163 DVETAKLTRISTAASDHRCPVFSADGRRLAYV 194


>gi|262382472|ref|ZP_06075609.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295350|gb|EEY83281.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 489

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 92/317 (29%), Gaps = 56/317 (17%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E G     I+ + +  +    +  +   D  G N          +        +  ++ +
Sbjct: 142 EPGYEKWHIVGIYQRNLESFDEQPIIRNDMTGYNC---------MNCHSFCMGDPGQMMF 192

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---------- 278
                     +           K  G   +M   P +  +G+    SV            
Sbjct: 193 HMRAANGGTYIVQDKKISKLNTKTNGTISNMTY-PFWHPSGRYITTSVNDIKQFFHSVKE 251

Query: 279 ------DEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFES--------- 320
                 D   D+   D+++        L          ++SPD   + F +         
Sbjct: 252 KKMEVFDLESDVVVYDVKNKEILSKASLITKDAFETFPAFSPDGKWLYFCTAPAQKMPEN 311

Query: 321 -DREGKEQLYV-MQSNGSDQK----RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            D+       V    +  +       +      SY  P  SP G  + +T+ +  +F I 
Sbjct: 312 YDKVRYNLCRVAFDPDRGEISFPIDTLVHADSLSYTFPRISPDGRFLMYTETAYGQFPIW 371

Query: 375 VMKKDGSQE----RLLVEDSNLQAP------TWSPSGRSLIFSRKKDGD--TGSKLYSID 422
               +        R  ++ S L +P      +WS +   ++FS ++D    T   +  I 
Sbjct: 372 HPDAEIRMMDLENRTAMDMSALNSPDTDSYHSWSSNSDWVVFSSRRDNGLYTLPYICYIG 431

Query: 423 LNGRNETLINTPAYASD 439
            +G+       P    D
Sbjct: 432 KDGKPSKPFLLPQEDPD 448


>gi|294817639|ref|ZP_06776281.1| Putative WD-repeat containing protein [Streptomyces clavuligerus ATCC
            27064]
 gi|294322454|gb|EFG04589.1| Putative WD-repeat containing protein [Streptomyces clavuligerus ATCC
            27064]
          Length = 1316

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/265 (18%), Positives = 91/265 (34%), Gaps = 26/265 (9%)

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY-----LTPSRDQILFEPRFSPNQQKV 226
            DF    +F  +  +   +     V   D    R      +       ++   F+P+ + +
Sbjct: 983  DFVFGTVFSPDGRLLATVSQDRTVRLWDATAPRRRGPLAVLTGHTDNVYGAAFAPDGRTL 1042

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMD 283
            A  + D      V L D    R P R+         P    FS +G R L +   D  + 
Sbjct: 1043 ATTSEDQ----TVRLWDVTDPRRPGRLATLTGHRRNPEGVAFSPDG-RILATTSVDRTVR 1097

Query: 284  IYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            ++ VD    A   L   T       S  +SPD   +V   D +   +L+ + +    ++R
Sbjct: 1098 LWRVD-DRRAPRALAYFTAHRDHVRSVVFSPDGRTMVTAGD-DHTVRLWDLAAPERPRER 1155

Query: 341  -ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPT 396
             +            +   G ++A T    +   +  +   G    L V     S++    
Sbjct: 1156 AVLTRHSGGVSAVAFRSDGAVLA-TGSGDQTVRLWAVGGPGRPRELGVLSGHTSSVYGVA 1214

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSI 421
            ++P GR+L        D   +L+ +
Sbjct: 1215 FAPDGRTLA---TAGDDRTLRLWDV 1236



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 78/236 (33%), Gaps = 20/236 (8%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
             L  +       +        ++    F  + + +A A+ D      V L D  +     
Sbjct: 925  RLWDLTTPHPREQASLTGHPTMVISLSFRADGRALAAASQDH----SVRLWDLPLPA--- 977

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNATERLTNTLFINISASY 309
             +      +    FS +G+    +V +D  + ++  +   +      LT        A++
Sbjct: 978  -LAAHTDFVFGTVFSPDGRLLA-TVSQDRTVRLWDATAPRRRGPLAVLTGHTDNVYGAAF 1035

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +PD   +   S+ +      V       +         +     +SP G ++A T     
Sbjct: 1036 APDGRTLATTSEDQTVRLWDVTDPRRPGRLATLTGHRRNPEGVAFSPDGRILATTSVD-R 1094

Query: 370  KFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +  +  D    R L        ++++  +SP GR+++       D   +L+ +
Sbjct: 1095 TVRLWRVD-DRRAPRALAYFTAHRDHVRSVVFSPDGRTMV---TAGDDHTVRLWDL 1146



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 80/240 (33%), Gaps = 48/240 (20%)

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFIN 304
               +R G     + +  F+ +G+    +  +D+ + ++  DL +        LT  L   
Sbjct: 847  GERERPGGHTGSVWSVAFAPDGRSLA-TAGEDQTVRLW--DLTTPHPREQAGLTGHLRTV 903

Query: 305  ISASYSPDSSQIVF-------------------ESDREGKEQLYV---MQSNGSDQKRIS 342
             + +++PD   +                     ++   G   + +    +++G      S
Sbjct: 904  YAVAFAPDGRSLATAGEDQTVRLWDLTTPHPREQASLTGHPTMVISLSFRADGRALAAAS 963

Query: 343  QDKEASY---------------FDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERL 385
            QD                    F  V+SP G L+A          +     ++ G    L
Sbjct: 964  QDHSVRLWDLPLPALAAHTDFVFGTVFSPDGRLLATVSQDRTVRLWDATAPRRRGPLAVL 1023

Query: 386  LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
                 N+    ++P GR+L  + +   D   +L+ +    R   L     +  +P+ V F
Sbjct: 1024 TGHTDNVYGAAFAPDGRTLATTSE---DQTVRLWDVTDPRRPGRLATLTGHRRNPEGVAF 1080



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 64/217 (29%), Gaps = 30/217 (13%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLW V DR+      +F+        AH   D +   +    G         +       
Sbjct: 1097 RLWRVDDRRAPRALAYFT--------AHR--DHVRSVVFSPDGR--------TMVTAGDD 1138

Query: 189  IKNSLC-VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                L  +   +    R +       +    F  +   +A  + D      V L      
Sbjct: 1139 HTVRLWDLAAPERPRERAVLTRHSGGVSAVAFRSDGAVLATGSGDQ----TVRLWAVGGP 1194

Query: 248  RAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLF 302
              P+ +G       +     F+ +G+    +   D  + ++ V     A ER  LT    
Sbjct: 1195 GRPRELGVLSGHTSSVYGVAFAPDGRTLA-TAGDDRTLRLWDVTRPERARERAVLTGHTD 1253

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                 +++ D   +   S R+G   L+         +
Sbjct: 1254 RLHRVAFAADGHTVA-TSSRDGTALLWETDVRTVAAR 1289


>gi|126657252|ref|ZP_01728418.1| WD40-like Beta Propeller [Cyanothece sp. CCY0110]
 gi|126621523|gb|EAZ92234.1| WD40-like Beta Propeller [Cyanothece sp. CCY0110]
          Length = 155

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 56/136 (41%), Gaps = 5/136 (3%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISAS 308
           R  N R+  L P+ +S     +    ++ + D+Y  D Q      L     ++      S
Sbjct: 20  RGLNSRASDLEPQVTS--TYIVFISDRNGSQDVYLFDAQQRQLISLPGLNALDEIASHPS 77

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S +   +VF   R+GK  +YV       ++ ++ D +A   +P+ +  G  IAF     
Sbjct: 78  ISENGRYVVFAGSRQGKTNIYVYDRQTEQKRNLTTDLQAEVRNPIINADGTQIAFEIAQD 137

Query: 369 EKFAIGVMKKDGSQER 384
            ++ I +    G+  +
Sbjct: 138 GQWDIMIYDLFGNPLK 153



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 10/129 (7%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY----FDPVW 354
           N+   ++    +  S+ IVF SDR G + +Y+  +    ++ IS     +       P  
Sbjct: 23  NSRASDLEPQVT--STYIVFISDRNGSQDVYLFDAQ--QRQLISLPGLNALDEIASHPSI 78

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDG 412
           S  G  + F      K  I V  +   Q+R L  D   +   P  +  G  + F   +DG
Sbjct: 79  SENGRYVVFAGSRQGKTNIYVYDRQTEQKRNLTTDLQAEVRNPIINADGTQIAFEIAQDG 138

Query: 413 DTGSKLYSI 421
                +Y +
Sbjct: 139 QWDIMIYDL 147



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 51/124 (41%), Gaps = 7/124 (5%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATY 231
           ++ I+F+S+   S      + + D     +  L    + D+I   P  S N + V +A  
Sbjct: 35  STYIVFISDRNGS----QDVYLFDAQQRQLISLPGLNALDEIASHPSISENGRYVVFAGS 90

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                  +Y+ D + ++      + ++ +  P  +++G +    + +D   DI   DL  
Sbjct: 91  RQGKT-NIYVYDRQTEQKRNLTTDLQAEVRNPIINADGTQIAFEIAQDGQWDIMIYDLFG 149

Query: 292 NATE 295
           N  +
Sbjct: 150 NPLK 153



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 17/126 (13%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G  +      +G  +     +  AS  +P  +     I F         + +      Q
Sbjct: 5   TGYPRYLNFPFDGGGRGL---NSRASDLEPQVT--STYIVFISDRNGSQDVYLFDAQ--Q 57

Query: 383 ERLLVEDSNL------QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-- 434
            +L+              P+ S +GR ++F+  + G T   +Y  D     +  + T   
Sbjct: 58  RQLISLPGLNALDEIASHPSISENGRYVVFAGSRQGKT--NIYVYDRQTEQKRNLTTDLQ 115

Query: 435 AYASDP 440
           A   +P
Sbjct: 116 AEVRNP 121


>gi|17230958|ref|NP_487506.1| WD-40 repeat-containing protein [Nostoc sp. PCC 7120]
 gi|20532311|sp|Q8YRI1|YY46_ANASP RecName: Full=Uncharacterized WD repeat-containing protein alr3466
 gi|17132599|dbj|BAB75165.1| WD-40 repeat protein [Nostoc sp. PCC 7120]
          Length = 1526

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 97/313 (30%), Gaps = 42/313 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++  G D   V  RLWD+     +   +            HT    +   +    G  
Sbjct: 1044 GAMLASGSDDQTV--RLWDISSGNCLYTLQ-----------GHTSC--VRSVVFSPDGA- 1087

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                      + SG     + + D    N  Y        +    FSPN   +A    + 
Sbjct: 1088 ---------MLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLA----NG 1134

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 V L D    +    +    + + A  FS +G     S   D+ + ++ +   S  
Sbjct: 1135 SSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLA-SGSGDQTVRLWDIS-SSKC 1192

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
               L        S  ++PD S +   S     + + + + N S      Q   +     V
Sbjct: 1193 LYILQGHTSWVNSVVFNPDGSTLASGSS---DQTVRLWEINSSKCLCTFQGHTSWVNSVV 1249

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKD 411
            ++P G ++A          + +     S+     +       +  ++P G  L       
Sbjct: 1250 FNPDGSMLASGSSDKT---VRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLA---SGS 1303

Query: 412  GDTGSKLYSIDLN 424
            GD   +L+ I  +
Sbjct: 1304 GDQTVRLWEISSS 1316



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 83/240 (34%), Gaps = 21/240 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D   +   +        +    F+P+   +A  + D      V L +  
Sbjct: 1259 SGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQ----TVRLWEIS 1314

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +         S + +  FS +G     S   D+ + ++S+   S+     T     N 
Sbjct: 1315 SSKCLHTFQGHTSWVSSVTFSPDGTMLA-SGSDDQTVRLWSI---SSGECLYTFLGHTNW 1370

Query: 306  SAS--YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              S  +SPD + +   S   G + + +   +        Q         V+SP G L+A 
Sbjct: 1371 VGSVIFSPDGAILASGS---GDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLAS 1427

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                     + +      +    +    +++++  +S  G  LI +   D D   KL+ +
Sbjct: 1428 GSDDQT---VRLWNISSGECLYTLHGHINSVRSVAFSSDG--LILASGSD-DETIKLWDV 1481



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 69/233 (29%), Gaps = 20/233 (8%)

Query: 196  MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            ++  G N   L    ++++ E R   +         D  +     +  T  + A      
Sbjct: 806  VNYVGGNAATLLVKLNKMVLEGR---DLSHTVIIGADFTNTSLRCVNFTEANLAYSVFTK 862

Query: 256  FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDS 313
                +L   FS +GK  L +      +  +           LT         S  +S D 
Sbjct: 863  ILGSVLTVAFSPDGK--LFATGDSGGIVRFWEAATGKEL--LTCKGHNSWVNSVGFSQDG 918

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
              +   SD    + + +   +     +  +   +     V+SP   ++A          +
Sbjct: 919  KMLASGSD---DQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQT---V 972

Query: 374  GVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +      +   +       + +  ++  G  L       GD   +L+ I  +
Sbjct: 973  RLWDISSGECLYIFQGHTGWVYSVAFNLDGSMLA---TGSGDQTVRLWDISSS 1022


>gi|312881019|ref|ZP_07740819.1| hypothetical protein Apau_2301 [Aminomonas paucivorans DSM 12260]
 gi|310784310|gb|EFQ24708.1| hypothetical protein Apau_2301 [Aminomonas paucivorans DSM 12260]
          Length = 319

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 61/160 (38%), Gaps = 17/160 (10%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLY 329
           R +   Q+     I+  DL +     L+     +     SP+ +++ F  SD  G   + 
Sbjct: 42  RLVF--QRPGDDRIWLSDLSARKP--LSVARGAD--PEISPEGTRVAFTRSDSRGGRTVA 95

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLV 387
           V+       + +    + SY  P WSP G L+ F  +      + +GV   DG+   L  
Sbjct: 96  VLDLENRSLRVLPLPGDNSY-GPRWSPDGKLLVFNHWDRKASNWTLGVAAPDGTGLHLFP 154

Query: 388 E-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                + +P W P G SL             LY  DL+G 
Sbjct: 155 SLPGGVYSPAWDPRGESLY------AQDLRTLYRFDLSGT 188



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 76/243 (31%), Gaps = 34/243 (13%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI- 274
           +P  SP   +VA+   D      V ++D   +R+ + +         PR+S +GK  +  
Sbjct: 71  DPEISPEGTRVAFTRSDSRGGRTVAVLDLE-NRSLRVLPLPGDNSYGPRWSPDGKLLVFN 129

Query: 275 -SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              +K     +              +      S ++ P    +  +  R     LY    
Sbjct: 130 HWDRKASNWTLGVAAPDGTGLHLFPSLPGGVYSPAWDPRGESLYAQDLRT----LYRFDL 185

Query: 334 NGSDQKRISQDKEASYFDPVWS------PQGDLI-----------AFTKFSGEKFAIGVM 376
           +G+  +R    +      P  +      P G  +                S     +G++
Sbjct: 186 SGTLTERRPLKEVLGSLSPDSALRLCPLPDGAWLFDGARLDASHPVARAVSEPASEVGLL 245

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIF----SRKKDGDTGS-----KLYSIDLNGRN 427
              G + RL     +   P+    G  ++F     R   G         +LY +D  G+ 
Sbjct: 246 LPGGERRRLSPSSLSASHPSPLADGG-VVFDGFGVRDVTGKGEGLRIRFRLYRMDPQGKV 304

Query: 428 ETL 430
             L
Sbjct: 305 TPL 307



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 58/175 (33%), Gaps = 17/175 (9%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDL 289
           +      R++L D     A K +   R     P  S  G R   +         +  +DL
Sbjct: 45  FQRPGDDRIWLSDL---SARKPLSVARGAD--PEISPEGTRVAFTRSDSRGGRTVAVLDL 99

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           ++ +   L      +    +SPD   +VF   DR+       + +       +       
Sbjct: 100 ENRSLRVLPLPGDNSYGPRWSPDGKLLVFNHWDRKASNWTLGVAAPDGTGLHLFPSLPGG 159

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSG 401
            + P W P+G+ +    ++ +   +      G+    L E   L+    + SP  
Sbjct: 160 VYSPAWDPRGESL----YAQDLRTLYRFDLSGT----LTERRPLKEVLGSLSPDS 206



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 53/139 (38%), Gaps = 11/139 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +R+ F       G    ++ V+D +  ++R L    D   + PR+SP+ + + +  +D +
Sbjct: 79  TRVAFTRSDSRGG---RTVAVLDLENRSLRVLPLPGDN-SYGPRWSPDGKLLVFNHWDRK 134

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                  +            +    + +P +   G+    S+   +   +Y  DL    T
Sbjct: 135 ASNWTLGVAAPDGTGLHLFPSLPGGVYSPAWDPRGE----SLYAQDLRTLYRFDLSGTLT 190

Query: 295 ERLTNTLFINISASYSPDS 313
           ER        +  S SPDS
Sbjct: 191 ER---RPLKEVLGSLSPDS 206


>gi|186685368|ref|YP_001868564.1| hypothetical protein Npun_F5300 [Nostoc punctiforme PCC 73102]
 gi|186467820|gb|ACC83621.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1181

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 83/214 (38%), Gaps = 15/214 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSPN + +A  T D    +R+Y +         +       + +  FS +G+    S  
Sbjct: 570 AFSPNGKLLA--TGDTNGEIRLYEVANSQQLMTCK--GHTGWVWSVTFSPDGQVLA-SGS 624

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D+ + ++  D+ +    + L        S +++PDS  +   SD    + + +   +  
Sbjct: 625 NDQTIKLW--DISNGQCLKTLEGHSGGVRSVTFNPDSQLLASGSD---DQTVKLWNISTG 679

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
              +  Q+   S +   ++P+GD++A +     K  +  +  +     L      + +  
Sbjct: 680 KCLKTLQENGCSIWSVAFNPKGDVLA-SGNDDYKVRLWDINSNSCIHTLEGHTQRVYSVC 738

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +SP G ++  +     D   KL+        +TL
Sbjct: 739 FSPDGNTIASASH---DQTVKLWDTSTGKYIKTL 769



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/237 (12%), Positives = 80/237 (33%), Gaps = 14/237 (5%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F+       + + +G     + + +   +            ++   FSP+ Q +A  +
Sbjct: 565 GIFSVAFSPNGKLLATGDTNGEIRLYEVANSQQLMTCKGHTGWVWSVTFSPDGQVLASGS 624

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D      + L D    +  K +      + +  F+ +  + L S   D+ + ++++   
Sbjct: 625 NDQ----TIKLWDISNGQCLKTLEGHSGGVRSVTFNPD-SQLLASGSDDQTVKLWNIS-T 678

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
               + L        S +++P    +   +D     ++ +   N +      +      +
Sbjct: 679 GKCLKTLQENGCSIWSVAFNPKGDVLASGND---DYKVRLWDINSNSCIHTLEGHTQRVY 735

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
              +SP G+ IA          + +      +    ++       + T+S  G +L+
Sbjct: 736 SVCFSPDGNTIASASHDQT---VKLWDTSTGKYIKTLQGHTDLVHSVTFSVDGSALV 789



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 99/315 (31%), Gaps = 35/315 (11%)

Query: 130  LWDVKDRKQIIGKKFFS------------------SPASWRKIAHTISDDIYQSITGEKG 171
            LWD    K I   +  +                        ++   +S    +++ G K 
Sbjct: 757  LWDTSTGKYIKTLQGHTDLVHSVTFSVDGSALVSCGDDQTVRVWDFVSGQCLKTLQGHKS 816

Query: 172  -DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYA 229
              ++  I        S     ++ + +             +  ++    SP +   +A  
Sbjct: 817  RVWSLAICINQNICASSSDDQTVKLWNMSTGRCIKTFQGYNNGIWSVAVSPTDNNILASG 876

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            + D      V L D    +  K +      + +  FS +    L S  +D+ + ++  DL
Sbjct: 877  SNDQ----TVTLWDITAGKCIKTLREHGRRVTSVGFSPD-AHLLASGSEDQTVRLW--DL 929

Query: 290  QSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             ++   + L        S ++S DS  +   SD    + + +            ++    
Sbjct: 930  STSKCLKILKGHSNRVTSVTFSADSYFLASGSD---DQTIRIWDITTGQCLNALREHSGR 986

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             +   +SP   ++A +    +   +  ++       L      +    +SP+G  L    
Sbjct: 987  TWSVTFSPDSHVLA-SGSHDQTVKLWDVRTGRCLHTLQGHTEWVWGVAFSPNGGMLA--- 1042

Query: 409  KKDGDTGSKLYSIDL 423
               GD   KL+ +  
Sbjct: 1043 SGSGDQTIKLWDVST 1057



 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 82/287 (28%), Gaps = 35/287 (12%)

Query: 116  VIKEGKDRLRVEFRLWDVKDRK---QIIGKKFFSSPASWRKIAHTIS-----------DD 161
            ++  G +   V   LWD+   K    +       +   +   AH ++           D 
Sbjct: 872  ILASGSNDQTVT--LWDITAGKCIKTLREHGRRVTSVGFSPDAHLLASGSEDQTVRLWDL 929

Query: 162  IYQSITGEKGDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
                        ++R+  V+ S       SG    ++ + D                 + 
Sbjct: 930  STSKCLKILKGHSNRVTSVTFSADSYFLASGSDDQTIRIWDITTGQCLNALREHSGRTWS 989

Query: 217  PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              FSP+   +A  ++D      V L D R  R    +      +    FS NG     S 
Sbjct: 990  VTFSPDSHVLASGSHDQ----TVKLWDVRTGRCLHTLQGHTEWVWGVAFSPNGGMLA-SG 1044

Query: 277  QKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D+ + ++  D+ +      L +      S ++S D   +   S   G + + +   N 
Sbjct: 1045 SGDQTIKLW--DVSTGQCIRTLQDHTNTVYSVAFSSDGRILASGS---GDQTVKLWDVNT 1099

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                R         +   +      +           I +      +
Sbjct: 1100 GSCLRTLLGHTRWVWSVTFRSDDQTVVSCSEDET---IKIWDVQTGE 1143



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/330 (14%), Positives = 112/330 (33%), Gaps = 33/330 (10%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQI-------IGKKFFSSPASWRKIAHTISDDIYQ-- 164
           G+V+  G +   +  +LWD+ + + +        G +  +     + +A    D   +  
Sbjct: 617 GQVLASGSNDQTI--KLWDISNGQCLKTLEGHSGGVRSVTFNPDSQLLASGSDDQTVKLW 674

Query: 165 --------SITGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                       E G     + F  +  V  SG     + + D +  +  +      Q +
Sbjct: 675 NISTGKCLKTLQENGCSIWSVAFNPKGDVLASGNDDYKVRLWDINSNSCIHTLEGHTQRV 734

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +   FSP+   +A A++D      V L DT   +  K +     ++ +  FS +G  AL+
Sbjct: 735 YSVCFSPDGNTIASASHDQ----TVKLWDTSTGKYIKTLQGHTDLVHSVTFSVDG-SALV 789

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S   D+ + ++   +     + L        S +   + +     SD    + + +   +
Sbjct: 790 SCGDDQTVRVWDF-VSGQCLKTLQGHKSRVWSLAICINQNICASSSD---DQTVKLWNMS 845

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                +  Q      +    SP  + I  +  + +   +  +      + L      + +
Sbjct: 846 TGRCIKTFQGYNNGIWSVAVSPTDNNILASGSNDQTVTLWDITAGKCIKTLREHGRRVTS 905

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +SP    L        D   +L+ +  +
Sbjct: 906 VGFSPDAHLLA---SGSEDQTVRLWDLSTS 932



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 65/177 (36%), Gaps = 17/177 (9%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSS 314
             I +  FS NGK    +   +  + +Y V      +++L           S ++SPD  
Sbjct: 564 GGIFSVAFSPNGKLLA-TGDTNGEIRLYEV----ANSQQLMTCKGHTGWVWSVTFSPDGQ 618

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S+    + + +   +     +  +          ++P   L+A +    +   + 
Sbjct: 619 VLASGSN---DQTIKLWDISNGQCLKTLEGHSGGVRSVTFNPDSQLLA-SGSDDQTVKLW 674

Query: 375 VMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +   G   + L E+  ++ +  ++P G  L      + D   +L+ I+ N    TL
Sbjct: 675 NIST-GKCLKTLQENGCSIWSVAFNPKGDVLA---SGNDDYKVRLWDINSNSCIHTL 727



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 44/348 (12%), Positives = 102/348 (29%), Gaps = 43/348 (12%)

Query: 120 GKDRLRVEFRLWDVKDRKQII-----------------GKKFFSSPASWRKIAHTISD-D 161
                  E RL++V + +Q++                 G+   S           IS+  
Sbjct: 579 ATGDTNGEIRLYEVANSQQLMTCKGHTGWVWSVTFSPDGQVLASGSNDQTIKLWDISNGQ 638

Query: 162 IYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
             +++ G  G   S         + SG    ++ + +                ++   F+
Sbjct: 639 CLKTLEGHSGGVRSVTFNPDSQLLASGSDDQTVKLWNISTGKCLKTLQENGCSIWSVAFN 698

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A       D  +V L D   +     +      + +  FS +G     S   D+
Sbjct: 699 PKGDVLA----SGNDDYKVRLWDINSNSCIHTLEGHTQRVYSVCFSPDGNTIA-SASHDQ 753

Query: 281 AMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + ++  D  +    + L     +  S ++S D S +V   D    + + V         
Sbjct: 754 TVKLW--DTSTGKYIKTLQGHTDLVHSVTFSVDGSALVSCGD---DQTVRVWDFVSGQCL 808

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTW 397
           +  Q  ++  +          I  +    +   +        +     +  N    +   
Sbjct: 809 KTLQGHKSRVWSLAICIN-QNICASSSDDQTVKLW--NMSTGRCIKTFQGYNNGIWSVAV 865

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNG------RNETLINTPAYASD 439
           SP+  +++       D    L+ I           +   + +  ++ D
Sbjct: 866 SPTDNNIL--ASGSNDQTVTLWDITAGKCIKTLREHGRRVTSVGFSPD 911


>gi|284163411|ref|YP_003401690.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haloterrigena turkmenica DSM 5511]
 gi|284013066|gb|ADB59017.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haloterrigena turkmenica DSM 5511]
          Length = 726

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 53/360 (14%), Positives = 105/360 (29%), Gaps = 86/360 (23%)

Query: 147 SPASWRKIAHTISDDIYQSITGEK----GDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            PA      + I    Y  IT  +       + R+ FV  +  +     +       G +
Sbjct: 15  GPAGTTSSMNRIEAVDYHEITHVEEPRLSPSDERVAFVRRTPAADESYAASIYTVPVGGD 74

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                 + D +  +PR+SP+  ++A+A+   E       +        +R+ +    I  
Sbjct: 75  EAAQFTASDGVDSQPRWSPDGDRLAFASTRGEGDREQVWLVPTDGGEARRLTSVVGGIDD 134

Query: 263 PRFSSNGKRALISVQ----------------------------------------KDEAM 282
             +S NG R L S +                                             
Sbjct: 135 LEWSPNGSRLLFSQRVAPEDREAGRDRTVDPDYERETPDPRVIDRTIYRAGTEYIDGRRR 194

Query: 283 DIYSV------------DLQSNATERLTNTLF------INISASYSPDSSQIVFES---- 320
            +Y +            +    A  RLT+           +S ++  D   I + +    
Sbjct: 195 HVYVLEVEAALSRDPEDNPDGTAITRLTDEDGPADVPVDYVSPTWG-DDETIYYAAKAAA 253

Query: 321 -----DREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFT-----KFSGE 369
                D      LY   ++  + +  +Q            +  G  +AF      + S  
Sbjct: 254 AGEDPDDTLAYDLYEHGTDSGEIEAFTQTTGWLESGSIDATADGR-VAFEFTPEDRTSMR 312

Query: 370 KFAIGVMKKDGSQERLLVED-----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +  I V  ++  +ER   E       +     W+P G +L  +   +G      +S+  +
Sbjct: 313 QTEIRVHDRETGEERTPTEPLDRTVGHRCGFEWAPDGETLYVTTPDEGSRVC--WSVPGD 370


>gi|38505813|ref|NP_942432.1| WD repeat-containing protein [Synechocystis sp. PCC 6803]
 gi|38423837|dbj|BAD02046.1| WD-repeat protein [Synechocystis sp. PCC 6803]
          Length = 1237

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 96/317 (30%), Gaps = 44/317 (13%)

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI--------SDDIYQSITG---- 168
                    +LWD    + +  K      A+ R IA            DD    + G    
Sbjct: 869  SGGHDGTLKLWDTGTGQCL--KSLTGHMANIRAIAPAPDGQTLALGCDDTIVRLCGADSP 926

Query: 169  ---EKGDFNSRILF------VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
                    +S ++         E++ S     +L V  R       +       ++   +
Sbjct: 927  PSFIHAFGHSHLISDLCWNPTGENLASASHDCNLRVWQRSPLRCTQVLKGHTNWVWSVDW 986

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
             P Q  +A  + D      + L         K +    S IL+ R+   G+    S   D
Sbjct: 987  HPTQDLLASGSVDS----TIRLWYPTQSTPVKTLMAQTSWILSVRWHPTGRWLA-SAAGD 1041

Query: 280  EAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              + ++     S   E    LT         ++SP+   +           +++ +    
Sbjct: 1042 FTIGLW----NSKTWECTHLLTGHTHWIWCLAWSPNGQYLA---SGGYDNTVFIWKVEKE 1094

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQA 394
                 + +         W P G+L+A +   G    I +      Q   R+      +  
Sbjct: 1095 VTSLRTLEHPTILSAIAWHPDGELLATSCHDG---NIRLWHWQTGQCVTRISGHQGEILT 1151

Query: 395  PTWSPSGRSLIFSRKKD 411
              +SP G+ L +S  +D
Sbjct: 1152 LKFSPDGKRL-YSSSQD 1167



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 49/322 (15%), Positives = 99/322 (30%), Gaps = 36/322 (11%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--HTISDDIY-------------- 163
                     RLWDV   +    ++   S  +W   A  H     I               
Sbjct: 826  ASSSHDATVRLWDVVTGRC---RRILRSHQNWVWYARWHPHQPRIISGGHDGTLKLWDTG 882

Query: 164  --QSITGEKG-DFNSRILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
              Q +    G   N R +  +    +   G     + +   D             ++ + 
Sbjct: 883  TGQCLKSLTGHMANIRAIAPAPDGQTLALGCDDTIVRLCGADSPPSFIHAFGHSHLISDL 942

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             ++P  + +A A++D      + +      R  + +    + + +  +    +  L S  
Sbjct: 943  CWNPTGENLASASHD----CNLRVWQRSPLRCTQVLKGHTNWVWSVDWHPT-QDLLASGS 997

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D  + ++    QS   + L       +S  + P    +       G   + +  S   +
Sbjct: 998  VDSTIRLW-YPTQSTPVKTLMAQTSWILSVRWHPTGRWLA---SAAGDFTIGLWNSKTWE 1053

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
               +        +   WSP G  +A   +    F I  ++K+ +  R L   + L A  W
Sbjct: 1054 CTHLLTGHTHWIWCLAWSPNGQYLASGGYDNTVF-IWKVEKEVTSLRTLEHPTILSAIAW 1112

Query: 398  SPSGRSLIFSRKKDGDTGSKLY 419
             P G  L  +   DG+     +
Sbjct: 1113 HPDGELLA-TSCHDGNIRLWHW 1133



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 55/151 (36%), Gaps = 11/151 (7%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +    +SP+   +A +  D      + L +   D+AP+ +      + +  ++ +G   
Sbjct: 770 PVRWATWSPDGHTLAISREDGG----IVLWNPHSDQAPRYLNGHPETVWSLDWNPDGAWL 825

Query: 273 LISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             S   D  + ++  D+ +    R L +       A + P   +I+     +G  +L+  
Sbjct: 826 A-SSSHDATVRLW--DVVTGRCRRILRSHQNWVWYARWHPHQPRII-SGGHDGTLKLW-- 879

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +      +      A+      +P G  +A
Sbjct: 880 DTGTGQCLKSLTGHMANIRAIAPAPDGQTLA 910



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 57/171 (33%), Gaps = 15/171 (8%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V L D        RI      +    +S +G    IS ++D  + +++      A   L 
Sbjct: 751 VKLWDVETGIC-HRIWREAVPVRWATWSPDGHTLAIS-REDGGIVLWN-PHSDQAPRYLN 807

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  S  ++PD + +   S  +   +L+         +RI +  +   +   W P  
Sbjct: 808 GHPETVWSLDWNPDGAWLA-SSSHDATVRLW--DVVTGRCRRILRSHQNWVWYARWHPHQ 864

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQ-ERLLV---EDSNLQAPTWSPSGRSLI 405
             I      G    + +      Q  + L     +    AP  +P G++L 
Sbjct: 865 PRIISGGHDGT---LKLWDTGTGQCLKSLTGHMANIRAIAP--APDGQTLA 910



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/145 (13%), Positives = 56/145 (38%), Gaps = 9/145 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ + +       +L       ++   +SPN Q +A   YD+     V++    
Sbjct: 1037 SAAGDFTIGLWNSKTWECTHLLTGHTHWIWCLAWSPNGQYLASGGYDN----TVFIWKVE 1092

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             +    R     +++ A  +  +G+    +   D  + ++    Q+     R++      
Sbjct: 1093 KEVTSLRTLEHPTILSAIAWHPDGELLA-TSCHDGNIRLW--HWQTGQCVTRISGHQGEI 1149

Query: 305  ISASYSPDSSQIVFESDREGKEQLY 329
            ++  +SPD  ++ + S ++   + +
Sbjct: 1150 LTLKFSPDGKRL-YSSSQDETWKTW 1173



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 43/108 (39%), Gaps = 7/108 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG   N++ +   +       T     IL    + P+ + +A + +D      + L   +
Sbjct: 1079 SGGYDNTVFIWKVEKEVTSLRTLEHPTILSAIAWHPDGELLATSCHDG----NIRLWHWQ 1134

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +   RI   +  IL  +FS +GKR   S  +DE    +  D Q+  
Sbjct: 1135 TGQCVTRISGHQGEILTLKFSPDGKRL-YSSSQDETWKTW--DWQTGT 1179



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 72/227 (31%), Gaps = 18/227 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y           P  S + + +A  + D      V + +    +    +    ++  A  
Sbjct: 640 YPLHRSYVWDLRP--SADGRWLATCSEDQ----TVKITNLATGQLQATLVVAPTIARAIV 693

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +   G   L     D  + ++       A   +T    I  S S+  +S+     +    
Sbjct: 694 W--IGPDCLAIGGIDGHIRLW-YPFTEQAPVLVTAHTDIVNSLSWDANSNL---LASSSS 747

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +         RI ++         WSP G  +A ++  G    +     D +   
Sbjct: 748 DSTVKLWDVETGICHRIWREA-VPVRWATWSPDGHTLAISREDGG-IVLWNPHSDQAPRY 805

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           L      + +  W+P G  L  S     D   +L+ + + GR   ++
Sbjct: 806 LNGHPETVWSLDWNPDGAWLASSSH---DATVRLWDV-VTGRCRRIL 848


>gi|170102865|ref|XP_001882648.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642545|gb|EDR06801.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1064

 Score = 72.7 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 15/160 (9%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASY 309
           R+    S + +  FS +G+  + S   D+ + ++  D Q+  +    L        S ++
Sbjct: 826 RLVGHDSWVTSVAFSPDGRHIV-SGSGDKTVRVW--DAQTGQSVIDPLKGHDDYVTSVAF 882

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD   IV  S     E + V  +          +  +       +SP G  I       
Sbjct: 883 SPDGRHIVSGSH---DETVRVWDAQTGQSVMDPLKGHDFWVTSVAFSPDGRHIV---SGS 936

Query: 369 EKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLI 405
               + V      Q     L   DS + +  +SP GR ++
Sbjct: 937 GDKTVRVWDAQTGQSVMDPLKGHDSWVTSVAFSPDGRHIV 976



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 69/201 (34%), Gaps = 15/201 (7%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              D  +    FSP+ + +   + D    +RV+   T        +      + +  FS +
Sbjct: 829  GHDSWVTSVAFSPDGRHIVSGSGD--KTVRVWDAQTG-QSVIDPLKGHDDYVTSVAFSPD 885

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKE 326
            G+  + S   DE + ++  D Q+  +    L    F   S ++SPD   IV  S   G +
Sbjct: 886  GRHIV-SGSHDETVRVW--DAQTGQSVMDPLKGHDFWVTSVAFSPDGRHIVSGS---GDK 939

Query: 327  QLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + V  +          +  ++      +SP G  I           + V     S + L
Sbjct: 940  TVRVWDAQTGQSVMDPLKGHDSWVTSVAFSPDGRHIVSGSDDKT---VRVWDACDSYDIL 996

Query: 386  LVEDSNLQAPTWSPSGRSLIF 406
            L      +     P    L++
Sbjct: 997  LKFCHYDRNWIMLPDNAHLVW 1017



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 64/154 (41%), Gaps = 11/154 (7%)

Query: 173 FNSRILFVSESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           + + + F  +    VSG    ++ V D + G ++       D  +    FSP+ + +   
Sbjct: 833 WVTSVAFSPDGRHIVSGSGDKTVRVWDAQTGQSVIDPLKGHDDYVTSVAFSPDGRHIVSG 892

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           ++D+   +RV+   T         G+    + +  FS +G+  + S   D+ + ++  D 
Sbjct: 893 SHDE--TVRVWDAQTGQSVMDPLKGHDF-WVTSVAFSPDGRHIV-SGSGDKTVRVW--DA 946

Query: 290 QSNATE--RLTNTLFINISASYSPDSSQIVFESD 321
           Q+  +    L        S ++SPD   IV  SD
Sbjct: 947 QTGQSVMDPLKGHDSWVTSVAFSPDGRHIVSGSD 980


>gi|313836730|gb|EFS74444.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL037PA2]
 gi|314929864|gb|EFS93695.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL044PA1]
 gi|314972291|gb|EFT16388.1| WD40-like Beta Propeller repeat protein [Propionibacterium acnes
           HL037PA3]
          Length = 1089

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 71/193 (36%), Gaps = 21/193 (10%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   +     D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 9   PDVHGDLVVFIADDD----VWLVPITGGRASRLTNDHVMARNPRFSPNGAKIAWTSYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A      W    + + FT            +  +  DG
Sbjct: 65  RPEVFVIDLATGDQRRLTWLGAARNLVVGWQDD-EHVVFTSPHQSNDIGLTWLYTVSLDG 123

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLI 431
           + ERL       L   S+      +P+ G    + R + G T ++++       N   L+
Sbjct: 124 NVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWLRPAGADNFLRLL 182

Query: 432 NTPAYASDPQWVG 444
                  D ++  
Sbjct: 183 RDGNDDYDGRYAA 195



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 83/228 (36%), Gaps = 36/228 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M   PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMARNPRFSPNGAKIAWTSYLGQRPEVFVIDLATGDQRRLTWLGAARN 89

Query: 306 SASYSPDSSQIVFESDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +  +     LY +  +G + +R+         D   S  G + 
Sbjct: 90  LVVGWQDDEHVVFTSPHQSNDIGLTWLYTVSLDG-NVERL---GYGPGMDLAVSSDGAVA 145

Query: 362 AFT----------KFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRS------ 403
             T          ++ G   A   ++  G+    RLL + ++     ++ +GR       
Sbjct: 146 VVTPNSGDCSRWKRYRGGTAAQIWLRPAGADNFLRLLRDGNDDYDGRYAAAGRYGVGWID 205

Query: 404 --LIFSRK-KDGD---TGSKLYSIDLNGRNETL----INTPAYASDPQ 441
             LIFS    DGD     ++L+S++  G +            Y  DP+
Sbjct: 206 GRLIFSSDMSDGDCPQAQAQLWSVNGRGHDLCQHTHHGPKQGYVRDPR 253



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 58/184 (31%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L        +    +   + A+ +PD  ++   S      ++
Sbjct: 352 QGVWASDVDGEDCLEVANLDGTGEIRHVAQGQIGRVLHAAPAPDGKKVALISH---DGRI 408

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQER 384
            ++       + + +  E       WSP    + +        G    I    + G+ E 
Sbjct: 409 LIVTIADGTTREVGKSVEGEATGLAWSPDSRYLVWRSPMATGEGMIGQIRCWDEQGAGES 468

Query: 385 --LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 469 VALTRGTFDDSTPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 527

Query: 442 WVGF 445
              F
Sbjct: 528 -SPF 530



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 59/179 (32%), Gaps = 14/179 (7%)

Query: 193 LCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L V + DG   IR++   +   +     +P+ +KVA  ++D     R+ ++        +
Sbjct: 365 LEVANLDGTGEIRHVAQGQIGRVLHAAPAPDGKKVALISHDG----RILIVTIADGTTRE 420

Query: 252 RIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSV---DLQS-NATERLTNTLFINIS 306
              +         +S + +  +  S        I  +   D Q    +  LT   F + +
Sbjct: 421 VGKSVEGEATGLAWSPDSRYLVWRSPMATGEGMIGQIRCWDEQGAGESVALTRGTFDDST 480

Query: 307 ASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQGDLI 361
             ++ D   +   S R  +          +    +R  +             SPQG  I
Sbjct: 481 PVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEASPFGPSPQGWRI 539


>gi|294508047|ref|YP_003572105.1| conserved hypothetical protein, secreted [Salinibacter ruber M8]
 gi|294344375|emb|CBH25153.1| conserved hypothetical protein, secreted [Salinibacter ruber M8]
          Length = 1012

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 80/229 (34%), Gaps = 12/229 (5%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            F P  +P      +A   D     +  +              R   + P  S +G    
Sbjct: 435 AFTPARAPGG--PVWAARRDGSFSELVTLGEERATLRAHRPGLRYKQVVP--SPSGDTIA 490

Query: 274 ISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +     E   +Y  D  ++  E  L          ++ P+   ++F +D  G   +Y + 
Sbjct: 491 VLANAGETQGLYRFDPSTSTLEPWLRFEGGSIYDVTWGPEGRYVLFAADPSGIANVYALD 550

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
               D +R++  +  +  +P  SP  + +AF ++  E+F +  +       R + +    
Sbjct: 551 RRDGDVRRLTTVRYGAL-EPTLSPGRERVAFARYRHERFELATVPFRPDSPRPVADTERD 609

Query: 393 QAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNETLINTPAYASD 439
               W+P G  L  S      G  G++      +G ++  + +   A+ 
Sbjct: 610 ----WAPRGGVLTASADSAAGGRAGAERRVSGTDGASQNGLPSGRDAAS 654



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 82/277 (29%), Gaps = 15/277 (5%)

Query: 149 ASWRKIA-HTISDDIY----QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
            S R+ A   I+D       + +   +  + S    V+ +           +    G   
Sbjct: 316 DSLRQAAEQGITDPTVVAGTEGLHVRRPYWLSDSTLVAYASGYATRPGFYRIDVHTGERE 375

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSM 259
             ++             P+   + +A         D   +      +     R+ +  S 
Sbjct: 376 -VISHQATTQGRTYALGPDTTALYFARQHPDLLVPDATTLKTHRLNLRTGETRLVSETSG 434

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVF 318
              P  +  G   + + ++D +     V L         +   +       SP    I  
Sbjct: 435 AFTPARAPGGP--VWAARRDGSFSE-LVTLGEERATLRAHRPGLRYKQVVPSPSGDTIAV 491

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK- 377
            ++    + LY    + S  +   + +  S +D  W P+G  + F         +  +  
Sbjct: 492 LANAGETQGLYRFDPSTSTLEPWLRFEGGSIYDVTWGPEGRYVLFAADPSGIANVYALDR 551

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           +DG   RL         PT SP    + F+R +    
Sbjct: 552 RDGDVRRLTTVRYGALEPTLSPGRERVAFARYRHERF 588


>gi|294638321|ref|ZP_06716574.1| putative cytoplasmic protein [Edwardsiella tarda ATCC 23685]
 gi|291088574|gb|EFE21135.1| putative cytoplasmic protein [Edwardsiella tarda ATCC 23685]
          Length = 276

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 52/146 (35%), Gaps = 16/146 (10%)

Query: 280 EAMDIYSVDLQSNATERLT-----NTLFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT         +  +   +   SPD S I F  SD +G  QL+
Sbjct: 120 GTSRTLPAPPAGIRQRRLTFTHDRRHPGLATTPRHWVRSSPDGSAIAFLMSDEQGVVQLW 179

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++  NG + ++I++ +        W P G  I       +   +      G+  R+    
Sbjct: 180 LISPNGGEARQITRGEHDVQSAFNWHPDGRSILMVM---DNSVVRCDVASGAVARVTARS 236

Query: 390 SN---LQAPTWSPSGRSLIFSRKKDG 412
           +     +A   SP G  + + R+ DG
Sbjct: 237 AQPPCAEAVVPSPDGHWVAYMREIDG 262



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 12/132 (9%)

Query: 256 FRSMILAPR-F---SSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISA-SY 309
              +   PR +   S +G      +  +   + ++ +        ++T       SA ++
Sbjct: 145 HPGLATTPRHWVRSSPDGSAIAFLMSDEQGVVQLWLISPNGGEARQITRGEHDVQSAFNW 204

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFS 367
            PD   I+   D      +           R++            V SP G  +A+ +  
Sbjct: 205 HPDGRSILMVMDNS----VVRCDVASGAVARVTARSAQPPCAEAVVPSPDGHWVAYMREI 260

Query: 368 GEKFAIGVMKKD 379
                I   +  
Sbjct: 261 DGWPQIFAARLT 272



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 51/133 (38%), Gaps = 11/133 (8%)

Query: 208 PSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                +   PR     SP+   +A+   D++ +++++L+      A +       +  A 
Sbjct: 143 RRHPGLATTPRHWVRSSPDGSAIAFLMSDEQGVVQLWLISPNGGEARQITRGEHDVQSAF 202

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--INISASY-SPDSSQIVFES 320
            +  +G+  L+ +       +   D+ S A  R+T          A   SPD   + +  
Sbjct: 203 NWHPDGRSILMVMDNS----VVRCDVASGAVARVTARSAQPPCAEAVVPSPDGHWVAYMR 258

Query: 321 DREGKEQLYVMQS 333
           + +G  Q++  + 
Sbjct: 259 EIDGWPQIFAARL 271



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 32/98 (32%), Gaps = 3/98 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++  +G   R +T     +     + P+ + +      D  ++R  +    + R   
Sbjct: 177 QLWLISPNGGEARQITRGEHDVQSAFNWHPDGRSIL--MVMDNSVVRCDVASGAVARVTA 234

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           R         A   S +G       + D    I++  L
Sbjct: 235 RSAQPPCAE-AVVPSPDGHWVAYMREIDGWPQIFAARL 271


>gi|298489657|ref|YP_003719834.1| WD40 domain-containing protein ['Nostoc azollae' 0708]
 gi|298231575|gb|ADI62711.1| WD-40-like beta propeller repeat-containing protein ['Nostoc
           azollae' 0708]
          Length = 175

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 5/142 (3%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SAS 308
           R  N  +  L P+ S  G+  L +  +  + D+Y  D  S     L      +      S
Sbjct: 36  RGLNSLASELNPQLS--GRYILFTTDRRGSQDVYMFDTVSQNLVDLPGLNAFDTIASHPS 93

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            + D   +VF +   G+  +++        + ++ + +A   +P  S  G+ IAF   + 
Sbjct: 94  VTQDGRYVVFVASHLGRSSIFLYDRETRQSRNLTANLQAEVCNPTISADGNTIAFEFSNN 153

Query: 369 EKFAIGVMKKDGSQERLLVEDS 390
            ++ I +  + G Q  +  E  
Sbjct: 154 GQWDILLYDRSGQQLNIPQEPR 175



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 56/154 (36%), Gaps = 12/154 (7%)

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--S 342
           Y  D          N+L   ++   S     I+F +DR G + +Y+  +   +   +   
Sbjct: 29  YPFDPGGRGL----NSLASELNPQLS--GRYILFTTDRRGSQDVYMFDTVSQNLVDLPGL 82

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPS 400
              +     P  +  G  + F      + +I +  ++  Q R L     + +  PT S  
Sbjct: 83  NAFDTIASHPSVTQDGRYVVFVASHLGRSSIFLYDRETRQSRNLTANLQAEVCNPTISAD 142

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           G ++ F    +G     LY  D +G+   +   P
Sbjct: 143 GNTIAFEFSNNGQWDILLY--DRSGQQLNIPQEP 174



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 6/126 (4%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRA 272
             P+ S   + + + T D      VY+ DT         G   F ++   P  + +G+  
Sbjct: 45  LNPQLS--GRYILFTT-DRRGSQDVYMFDTVSQNLVDLPGLNAFDTIASHPSVTQDGRYV 101

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVM 331
           +          I+  D ++  +  LT  L   + + + S D + I FE    G+  + + 
Sbjct: 102 VFVASHLGRSSIFLYDRETRQSRNLTANLQAEVCNPTISADGNTIAFEFSNNGQWDILLY 161

Query: 332 QSNGSD 337
             +G  
Sbjct: 162 DRSGQQ 167



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 7/121 (5%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDD 233
            ILF ++   S      + + D    N+  L    + D I   P  + + + V +     
Sbjct: 53  YILFTTDRRGS----QDVYMFDTVSQNLVDLPGLNAFDTIASHPSVTQDGRYVVFVASHL 108

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                ++L D    ++     N ++ +  P  S++G         +   DI   D     
Sbjct: 109 GRS-SIFLYDRETRQSRNLTANLQAEVCNPTISADGNTIAFEFSNNGQWDILLYDRSGQQ 167

Query: 294 T 294
            
Sbjct: 168 L 168


>gi|332708297|ref|ZP_08428278.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332352962|gb|EGJ32521.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1184

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 75/228 (32%), Gaps = 13/228 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDT 244
           +     ++ +   DG  +          +++   S +   +A A+ D    + +     T
Sbjct: 581 TASYDKTIKLWTLDGK-LLSTLNGHQAGVYDIAISLDGNLIASASDDKTVKLWKRDSQGT 639

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R  K +   ++ +     S + +    S   D+ + ++  D        L +     
Sbjct: 640 FQPRPYKTLNGHQAGVYGVAISPDSQMIA-SGSGDKTVKLWKAD--GTLITTLKDHSATV 696

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              + SPD   I   S   G + + +   NG    R  Q      ++   SP G  IA  
Sbjct: 697 YGVAISPDGQTIASAS---GDKTVKLWGYNG-KLLRTFQGHNDRVYNVAISPDGQTIASA 752

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
                   + +   DG+    L   S+ +     SP G+++  +    
Sbjct: 753 S---GDKTVRLWGTDGTLLNTLQGHSDRVYNLAISPDGKTIASASWDG 797



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 88/260 (33%), Gaps = 35/260 (13%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ S     ++ +   DG  I         +++    SP+ + +A A++D      V L
Sbjct: 829  KTIASASWDGTVRLWKPDG-IILTRLRGHSDLVWAVAISPDGKTIASASWDH----TVKL 883

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             + +       +    + +     S +G+    S   D  + ++      +  + LTN  
Sbjct: 884  WN-KDGSLQTTLTGHSARVSGIAISPDGEMIA-SASADNTIKLW--HRNGSLLKTLTNHT 939

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDPVWSP-- 356
               ++  +S D   I   S       + + + +G+    +   S   +   F    S   
Sbjct: 940  SAVLAVVFSSDGEMIASAS---ADNTIKLWKQDGTLINTLKGHSDRIDGVAFSKRCSAVL 996

Query: 357  -----------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSL 404
                        G LIA   +      + + K DG+    L    + + +   SP G ++
Sbjct: 997  GVSPMSDCIKKDGTLIASASWDKT---VKLWKPDGTLITTLKGHHDRVYSVAISPDGETI 1053

Query: 405  IFSRKKDGDTGSKLYSIDLN 424
              +     D   KL+  D  
Sbjct: 1054 ASASW---DKTIKLWKRDGT 1070



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 97/252 (38%), Gaps = 31/252 (12%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-T 244
            S    N++ +  R+G+ ++ LT     +L    FS + + +A A+ D  + ++++  D T
Sbjct: 915  SASADNTIKLWHRNGSLLKTLTNHTSAVLAV-VFSSDGEMIASASAD--NTIKLWKQDGT 971

Query: 245  RIDRAPKRIGNFRSMILAPR------FSS-------NGKRALISVQKDEAMDIYSVDLQS 291
             I+           +  + R       S        +G     S   D+ + ++  D   
Sbjct: 972  LINTLKGHSDRIDGVAFSKRCSAVLGVSPMSDCIKKDGTLIA-SASWDKTVKLWKPD--G 1028

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                 L        S + SPD   I   S     + + + + +G+    +    +A    
Sbjct: 1029 TLITTLKGHHDRVYSVAISPDGETIASAS---WDKTIKLWKRDGTLITTL-NGHQAGVLA 1084

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKK 410
             V+SP G+ IA   +      + + K+DG+    L   S+ + A  +SP+G  L      
Sbjct: 1085 VVFSPDGNRIASASYDKT---VKLWKQDGTLLTTLKGHSDGVLAVVFSPNGEMLA---SA 1138

Query: 411  DGDTGSKLYSID 422
             GD    ++ +D
Sbjct: 1139 SGDNTVIIWDLD 1150



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 77/241 (31%), Gaps = 22/241 (9%)

Query: 186 SGIIKNSLCVMDRDGA---NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S      L   D  G                ++    SP+ Q +A  + D    ++++  
Sbjct: 624 SDDKTVKLWKRDSQGTFQPRPYKTLNGHQAGVYGVAISPDSQMIASGSGD--KTVKLWKA 681

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D         + +  + +     S +G+    S   D+ + ++  +              
Sbjct: 682 D---GTLITTLKDHSATVYGVAISPDGQTIA-SASGDKTVKLWGYN--GKLLRTFQGHND 735

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              + + SPD   I   S   G + + +  ++G+    + Q      ++   SP G  IA
Sbjct: 736 RVYNVAISPDGQTIASAS---GDKTVRLWGTDGTLLNTL-QGHSDRVYNLAISPDGKTIA 791

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              + G    +     +G+    L      +     SP  +++  +     D   +L+  
Sbjct: 792 SASWDGT---VNQWSWEGTLLTTLRGHQDLVYGVAISPDEKTIASASW---DGTVRLWKP 845

Query: 422 D 422
           D
Sbjct: 846 D 846


>gi|126657253|ref|ZP_01728419.1| hypothetical protein CY0110_25031 [Cyanothece sp. CCY0110]
 gi|126621524|gb|EAZ92235.1| hypothetical protein CY0110_25031 [Cyanothece sp. CCY0110]
          Length = 232

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 9/129 (6%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS------AS 308
           N R     P  S +G+   +   ++ + +I   DL+S   E+  +   +N S       S
Sbjct: 88  NSRYNDQQPALSGDGRWLALVSNRNSSNEILLYDLRS---EKFMDLPGLNQSNVILESPS 144

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S     +V+ S  +G+  + +        + ++Q       +P  S  G  I F     
Sbjct: 145 LSRTGRYLVYISSVQGRPDVALYDRATRRAELLTQGYRNWVRNPQISADGRYIVFETARR 204

Query: 369 EKFAIGVMK 377
            ++ I V+ 
Sbjct: 205 GQWDIEVLD 213



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 42/124 (33%), Gaps = 4/124 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSP 356
           N+ + +   + S D   +   S+R    ++ +          +    +++     P  S 
Sbjct: 88  NSRYNDQQPALSGDGRWLALVSNRNSSNEILLYDLRSEKFMDLPGLNQSNVILESPSLSR 147

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDT 414
            G  + +      +  + +  +   +  LL +        P  S  GR ++F   + G  
Sbjct: 148 TGRYLVYISSVQGRPDVALYDRATRRAELLTQGYRNWVRNPQISADGRYIVFETARRGQW 207

Query: 415 GSKL 418
             ++
Sbjct: 208 DIEV 211



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 8/106 (7%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNL--QAPTW 397
           + +   +   P  S  G  +A          I +      +   L  +  SN+  ++P+ 
Sbjct: 86  TLNSRYNDQQPALSGDGRWLALVSNRNSSNEILLYDLRSEKFMDLPGLNQSNVILESPSL 145

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYASDPQ 441
           S +GR L++     G     LY  D   R   L+      +  +PQ
Sbjct: 146 SRTGRYLVYISSVQGRPDVALY--DRATRRAELLTQGYRNWVRNPQ 189



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 1/82 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               + IL  P  S   + + Y +        V L D    RA      +R+ +  P+ S
Sbjct: 133 LNQSNVILESPSLSRTGRYLVYISSVQGRP-DVALYDRATRRAELLTQGYRNWVRNPQIS 191

Query: 267 SNGKRALISVQKDEAMDIYSVD 288
           ++G+  +    +    DI  +D
Sbjct: 192 ADGRYIVFETARRGQWDIEVLD 213


>gi|78188196|ref|YP_378534.1| WD-40 repeat-containing protein [Chlorobium chlorochromatii CaD3]
 gi|78170395|gb|ABB27491.1| WD-40 repeat-containing protein [Chlorobium chlorochromatii CaD3]
          Length = 316

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 93/303 (30%), Gaps = 58/303 (19%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV--VSG 187
           LWDV   K +                HT+              +   + +  +S    SG
Sbjct: 60  LWDVASGKPL----------------HTM---------KGHSTWVECVDYSRDSKLLASG 94

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              +++ + D       +L    D  +    FSP+ + +A  + D      + L D    
Sbjct: 95  STDSTVRIWDAATGQCLHLCKGHDTAVRMVAFSPDSKVLASCSRDT----TIRLWDVANG 150

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +    +    S I    +S +GKR        E   I   D+ S       N    +   
Sbjct: 151 KQLAVLNGHTSYIECVAYSRDGKRLA---SCGEETVIRIWDVASGK-----NIANYDTGD 202

Query: 308 S------YSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                  +SPD   I F     G++ +  ++ +   +  ++ +    +     ++P G  
Sbjct: 203 RLSHAVQFSPDDKLIAF----GGRDAMVKILDAESGNMVKVMKGHGDAVRSVCFTPDGRK 258

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKL 418
           +           + V       E  +     L+  +   SP G  +        D   KL
Sbjct: 259 VVSAANDET---VRVWDVQSGNELHMYRGHVLEVQSVDVSPDGTVIASGSD---DRKIKL 312

Query: 419 YSI 421
           + +
Sbjct: 313 WRL 315



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 65/209 (31%), Gaps = 16/209 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N+          +   ++S + +K+   ++D+       L D    +    +    + +
Sbjct: 24  ENLIKTMEGHLDRVLCVKYSSDGKKLVSGSFDE----TAMLWDVASGKPLHTMKGHSTWV 79

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE 319
               +S + K    S   D  + I+  D  +     L       +   ++SPDS  +   
Sbjct: 80  ECVDYSRDSKLLA-SGSTDSTVRIW--DAATGQCLHLCKGHDTAVRMVAFSPDSKVLASC 136

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S       + +       Q  +     +      +S  G  +A     GE+  I +    
Sbjct: 137 SR---DTTIRLWDVANGKQLAVLNGHTSYIECVAYSRDGKRLASC---GEETVIRIWDVA 190

Query: 380 GSQ--ERLLVEDSNLQAPTWSPSGRSLIF 406
             +        D    A  +SP  + + F
Sbjct: 191 SGKNIANYDTGDRLSHAVQFSPDDKLIAF 219



 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 28/160 (17%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            R+WDV   K I    + +      +++H     +  S   +   F  R   V       
Sbjct: 184 IRIWDVASGKNIA--NYDTGD----RLSH----AVQFSPDDKLIAFGGRDAMVK------ 227

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                  ++D +  N+  +       +    F+P+ +KV  A  D+     V + D +  
Sbjct: 228 -------ILDAESGNMVKVMKGHGDAVRSVCFTPDGRKVVSAANDE----TVRVWDVQSG 276

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                       + +   S +G     S   D  + ++ +
Sbjct: 277 NELHMYRGHVLEVQSVDVSPDGTVIA-SGSDDRKIKLWRL 315


>gi|37520294|ref|NP_923671.1| WD-40 repeat-containing protein [Gloeobacter violaceus PCC 7421]
 gi|35211287|dbj|BAC88666.1| WD-40 repeat protein [Gloeobacter violaceus PCC 7421]
          Length = 1671

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 96/262 (36%), Gaps = 27/262 (10%)

Query: 159  SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            +++I        G+F            S   + S+ +    G  +R +    +  ++  R
Sbjct: 1102 ANNITSICFSPDGEFM----------ASADDRGSIYLWTSKGE-LRTVIRGHNATIWSLR 1150

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+ + +A A+ D    +R++    R  +  + +   +  +++  FS +G+    S   
Sbjct: 1151 FSPDSKLLASASQD--KTVRLW---NRNGKILRTLMGHQDEVMSVDFSPDGQTLA-SASW 1204

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D  + ++ +  Q N    L        S ++SPD  ++       G+++   + +     
Sbjct: 1205 DGTVRMWGI--QGNLISILKEHKDGIWSVAFSPDGQRLA----SAGQDKTLRLWNVHGQL 1258

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTW 397
                 D    +    +SP G ++A          + +  ++G     L      + +  +
Sbjct: 1259 LHTLSDNTTPFLSVRFSPDGSILASGSVDKT---VRLWSREGVLLSSLHGHTGRVNSLDF 1315

Query: 398  SPSGRSLIFSRKKDGDTGSKLY 419
            S  GR L  +         +LY
Sbjct: 1316 SADGRILASASDDKTLLLWRLY 1337



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 81/216 (37%), Gaps = 19/216 (8%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                   + +  FS +++ +A A++D    +R++ +D       K +    + I +  FS
Sbjct: 1057 LEGHSDFISQVSFSSSRKLMASASWD--RTIRLWQLD---GMPIKILKGHANNITSICFS 1111

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             +G+        D+   IY    +      +        S  +SPDS  +   S     +
Sbjct: 1112 PDGE---FMASADDRGSIYLWTSKGELRTVIRGHNATIWSLRFSPDSKLLASASQ---DK 1165

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             + +   NG   + +    +       +SP G  +A   + G    + +    G+   +L
Sbjct: 1166 TVRLWNRNGKILRTL-MGHQDEVMSVDFSPDGQTLASASWDGT---VRMWGIQGNLISIL 1221

Query: 387  VEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             E  + + +  +SP G+ L        D   +L+++
Sbjct: 1222 KEHKDGIWSVAFSPDGQRLA---SAGQDKTLRLWNV 1254



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 86/238 (36%), Gaps = 28/238 (11%)

Query: 192  SLCVMDRDG--------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +L     DG         N+  +       ++   FSP+ Q++A  +   +  LR++ + 
Sbjct: 1198 TLASASWDGTVRMWGIQGNLISILKEHKDGIWSVAFSPDGQRLA--SAGQDKTLRLWNVH 1255

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                +    + +  +  L+ RFS +G   L S   D+ + ++S   +      L      
Sbjct: 1256 ---GQLLHTLSDNTTPFLSVRFSPDG-SILASGSVDKTVRLWS--REGVLLSSLHGHTGR 1309

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIA 362
              S  +S D   +   SD    + L + +  G      +      +   V +SP     A
Sbjct: 1310 VNSLDFSADGRILASASD---DKTLLLWRLYG--PPLTAFRGHGQWVSCVGFSPDSQAFA 1364

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                +G    + +  + G  E  ++  + + A  +SP G  +        D   +L++
Sbjct: 1365 ---TAGGDGTLDLWDRQGRLENRVIPPATIFALAYSPDGTIIA---SGGNDRAVRLWT 1416



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 64/197 (32%), Gaps = 16/197 (8%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSPN   +A           +  +     +  K+I    + +   RF   G     +  
Sbjct: 1436 SFSPNGNLIA-----AGGPDGLVWLWGHKGKLFKKISTGHAELAVVRFGPRGLFLATAGG 1490

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D  + I+S          L     +    ++SPD+  +V  S R+G  + + +      
Sbjct: 1491 VDRTIRIWSQ--TGTLLRTLRGHPDLITDLTFSPDNQVLVSAS-RDGTLRYWTIA---GQ 1544

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPT 396
              +             +S  G  +A     G    + +    G    +L    + + A  
Sbjct: 1545 LLKTINAHSNRVTSIDFSADGKTVASAGADGT---VRLWGPVGESVAVLYGHKDSVGAVR 1601

Query: 397  WSPSGRSLIFSRKKDGD 413
            +SP  + ++ S   DG 
Sbjct: 1602 FSPDSK-ILLSGAADGS 1617



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 102/324 (31%), Gaps = 57/324 (17%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            D + +    +  +   W    + IS  I +    + G ++       + + S     +L 
Sbjct: 1195 DGQTLASASWDGTVRMWGIQGNLIS--ILKE--HKDGIWSVAFSPDGQRLASAGQDKTLR 1250

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD----------------DEDILR 238
            + +  G  +  L+ +    L   RFSP+   +A  + D                     R
Sbjct: 1251 LWNVHGQLLHTLSDNTTPFLSV-RFSPDGSILASGSVDKTVRLWSREGVLLSSLHGHTGR 1309

Query: 239  VYLMD-----------------TRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQK 278
            V  +D                          +  FR     +    FS +  +A  +   
Sbjct: 1310 VNSLDFSADGRILASASDDKTLLLWRLYGPPLTAFRGHGQWVSCVGFSPD-SQAFATAGG 1368

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D  +D++  D Q     R+        + +YSPD + I       G ++   + +     
Sbjct: 1369 DGTLDLW--DRQGRLENRVI-PPATIFALAYSPDGTIIA----SGGNDRAVRLWTRHGSY 1421

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-W 397
                  + A+     +SP G+LIA     G    + +    G   + +       A   +
Sbjct: 1422 LSQFDKQGAAVTSLSFSPNGNLIA---AGGPDGLVWLWGHKGKLFKKISTGHAELAVVRF 1478

Query: 398  SPSGRSLIFSRKKDG-DTGSKLYS 420
             P G   +F     G D   +++S
Sbjct: 1479 GPRG---LFLATAGGVDRTIRIWS 1499


>gi|288920998|ref|ZP_06415291.1| WD-40 repeat protein [Frankia sp. EUN1f]
 gi|288347632|gb|EFC81916.1| WD-40 repeat protein [Frankia sp. EUN1f]
          Length = 537

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 81/221 (36%), Gaps = 26/221 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+  ++A      ++ +R++       +AP+ +    S +    FS +G + L     
Sbjct: 291 FSPDGTRLA-TEDTTDNTVRLWETTRHDQKAPRAVLTGDSDLRGATFSPDGHQLL--TYG 347

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY--------- 329
             +  ++  ++Q                A++SPD   +   S   G  QL+         
Sbjct: 348 GASARVWDSEVQGQNARPQAVLTGNINDATFSPDGKLVA-TSAWGGDVQLWDSGARGEEM 406

Query: 330 -----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                +    G+ +   S   +  + + ++SP G L+A +        +      G+   
Sbjct: 407 TPLATLTDVIGNGETTESAQAQPDFSNMMFSPDGALLATSSVR--TVRLWDTTARGTVRP 464

Query: 385 LLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSID 422
           L+        P    +SP GR+L  +     D   +L+ +D
Sbjct: 465 LVTLPGQPGFPYQAEFSPDGRTLAINSY---DGAPRLWDVD 502



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 60/193 (31%), Gaps = 25/193 (12%)

Query: 265 FSSNGKRALISVQKDEAMDIY-SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G R       D  + ++ +      A   +         A++SPD  Q++  +   
Sbjct: 291 FSPDGTRLATEDTTDNTVRLWETTRHDQKAPRAVLTGDSDLRGATFSPDGHQLL--TYGG 348

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +++  +  G +  R       +  D  +SP G L+A T   G    +      G + 
Sbjct: 349 ASARVWDSEVQGQNA-RPQAVLTGNINDATFSPDGKLVA-TSAWGGDVQLWDSGARGEEM 406

Query: 384 RLLVE----------------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             L                    +     +SP G  L  S  +      +L+     G  
Sbjct: 407 TPLATLTDVIGNGETTESAQAQPDFSNMMFSPDGALLATSSVR----TVRLWDTTARGTV 462

Query: 428 ETLINTPAYASDP 440
             L+  P     P
Sbjct: 463 RPLVTLPGQPGFP 475



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 66/222 (29%), Gaps = 12/222 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP    +         +       T +             + A  FS   +  L++V  
Sbjct: 203 FSPGSDLLVTLDDATSRVWPTTAHGTDVTPLATL--GPAGEVTAVEFSP--RGGLLAVAG 258

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              + ++         + L             +SPD +++  E   +   +L+    +  
Sbjct: 259 GGTVQLWDTSTLGQGIQPLASLTGTGEVTRMEFSPDGTRLATEDTTDNTVRLWETTRHDQ 318

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAP 395
              R     ++      +SP G  +    + G    +   +  G   R   V   N+   
Sbjct: 319 KAPRAVLTGDSDLRGATFSPDGHQLL--TYGGASARVWDSEVQGQNARPQAVLTGNINDA 376

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           T+SP G+ +  S         +L+     G   T + T    
Sbjct: 377 TFSPDGKLVATSAW---GGDVQLWDSGARGEEMTPLATLTDV 415



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 53/190 (27%), Gaps = 24/190 (12%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
               D    R +    D  L    FSP+  ++                     +  +   
Sbjct: 313 TTRHDQKAPRAVLTG-DSDLRGATFSPDGHQL----LTYGGASARVWDSEVQGQNARPQA 367

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN----------TLFIN 304
                I    FS +GK    +      + ++    +      L            T    
Sbjct: 368 VLTGNINDATFSPDGKLVA-TSAWGGDVQLWDSGARGEEMTPLATLTDVIGNGETTESAQ 426

Query: 305 ISASYS-----PDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQG 358
               +S     PD + +   S R    +L+   + G+ +  ++   +    +   +SP G
Sbjct: 427 AQPDFSNMMFSPDGALLATSSVR--TVRLWDTTARGTVRPLVTLPGQPGFPYQAEFSPDG 484

Query: 359 DLIAFTKFSG 368
             +A   + G
Sbjct: 485 RTLAINSYDG 494



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 64/221 (28%), Gaps = 42/221 (19%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLW+     Q   +   +  +  R    T S D +Q +T                   G 
Sbjct: 309 RLWETTRHDQKAPRAVLTGDSDLRGA--TFSPDGHQLLTY------------------GG 348

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               +   +  G N R        I  +  FSP+ + VA + +       V L D+    
Sbjct: 349 ASARVWDSEVQGQNARPQAVLTGNIN-DATFSPDGKLVATSAWGG----DVQLWDSGARG 403

Query: 249 A--------PKRIGNFRSMILAPR--------FSSNGKRALISVQKDEAMDIYSVDLQSN 292
                       IGN  +   A          FS +G     S  +   +   +      
Sbjct: 404 EEMTPLATLTDVIGNGETTESAQAQPDFSNMMFSPDGALLATSSVRTVRLWDTTARGTVR 463

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
               L         A +SPD   +   S  +G  +L+ +  
Sbjct: 464 PLVTLPGQPGFPYQAEFSPDGRTLAINSY-DGAPRLWDVDP 503


>gi|209523193|ref|ZP_03271749.1| conserved hypothetical protein [Arthrospira maxima CS-328]
 gi|209496344|gb|EDZ96643.1| conserved hypothetical protein [Arthrospira maxima CS-328]
          Length = 209

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 52/135 (38%), Gaps = 4/135 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDL---QSNATERLTNTLFINISASYSPDSSQIVFE 319
           P  S NG+       ++    ++  DL          L  +L +  S S S     IV+ 
Sbjct: 76  PALSGNGRFLAFVSNREGQNQLFLYDLRRRSYKTLLELRRSLTVMESPSLSYTGRYIVYS 135

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           ++  G+  +Y+        + +++    +   P  SP G  I+F      ++ I ++ + 
Sbjct: 136 ANDSGRADIYLYDRLTYRLEMLTRGYRGAVRHPHISPNGRYISFEGSRRGQWDIEIIDR- 194

Query: 380 GSQERLLVEDSNLQA 394
           G    L  E S  ++
Sbjct: 195 GPNIELDTETSLSES 209



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 51/126 (40%), Gaps = 4/126 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSP 356
           N++  +   + S +   + F S+REG+ QL++        K + + + +      P  S 
Sbjct: 68  NSIATDEQPALSGNGRFLAFVSNREGQNQLFLYDLRRRSYKTLLELRRSLTVMESPSLSY 127

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  I ++     +  I +  +   +  +L       ++ P  SP+GR + F   + G  
Sbjct: 128 TGRYIVYSANDSGRADIYLYDRLTYRLEMLTRGYRGAVRHPHISPNGRYISFEGSRRGQW 187

Query: 415 GSKLYS 420
             ++  
Sbjct: 188 DIEIID 193



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 4/120 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRAL 273
           +P  S N + +A+ +  +    +++L D R       +   RS+ +  +P  S  G+  +
Sbjct: 75  QPALSGNGRFLAFVSNREGQN-QLFLYDLRRRSYKTLLELRRSLTVMESPSLSYTGRYIV 133

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            S       DIY  D  +   E LT            SP+   I FE  R G+  + ++ 
Sbjct: 134 YSANDSGRADIYLYDRLTYRLEMLTRGYRGAVRHPHISPNGRYISFEGSRRGQWDIEIID 193



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 14/116 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQ-------------ILFEPRFSPNQQKVAYATYD 232
           SG  +    V +R+G N  +L   R +             ++  P  S   + + Y+  D
Sbjct: 79  SGNGRFLAFVSNREGQNQLFLYDLRRRSYKTLLELRRSLTVMESPSLSYTGRYIVYSAND 138

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                 +YL D    R       +R  +  P  S NG+       +    DI  +D
Sbjct: 139 SGRA-DIYLYDRLTYRLEMLTRGYRGAVRHPHISPNGRYISFEGSRRGQWDIEIID 193


>gi|256838979|ref|ZP_05544489.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739898|gb|EEU53222.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 488

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 58/368 (15%), Positives = 112/368 (30%), Gaps = 70/368 (19%)

Query: 141 GKKFFSSPASWRKIAHTI---SDDIYQSITGEKGDFNSRI-LFVSESVVSGIIKNSLC-- 194
           G +F+   + WRK+       +  +      ++        LFV+   +   +   L   
Sbjct: 80  GGQFYLPASDWRKLLKRATGKAIQVKLYAKDKEWLAYPEFSLFVAPEPMDSYLAYRLIEP 139

Query: 195 ---VMDRDGANIRYLTPSRDQILFEPRFSP------------NQQKVAYATYDDEDILRV 239
              + ++ G   R L   +   + E ++S             N  K+ +   D      +
Sbjct: 140 GYELWNQMGIYQRNLEDYKQSPIMENKYSGQNCMNCHSFCMQNPDKMLFHMRDKYSGTYL 199

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------DEAMD 283
            +   +I++   +     S ++ P +  +GK    SV +                D   D
Sbjct: 200 -IDGDKIEKLNTKTDQTISPLVYPSWHPSGKYVAFSVNQTSQSFHANDKNRVEVFDSQSD 258

Query: 284 IYSVDLQSNA---TERLTNTLFINISASYSPDSSQIVFESDREGK-EQLY---------- 329
           +   D + +    T  +          ++SPD   + F S         Y          
Sbjct: 259 VVVYDTEKHEIISTPSIRTAKAFETFPTFSPDGKTLYFCSAEARSMPHEYSEVKYNLCSI 318

Query: 330 ----VMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---- 379
               V +S GS    +    +   S   P  SP G  + +T      F+I     D    
Sbjct: 319 AFDPVTRSFGSRIDTLYNAGKDGKSASFPRVSPDGKFLLYTLSGYGNFSIWHKDADLYLL 378

Query: 380 ------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY--SIDLNGRNETLI 431
                     +           +WS + R ++FS ++     ++ Y   ID  G      
Sbjct: 379 DIASGISHSLQNANSTDTESYHSWSSNSRWIVFSSRRIDRLYTRPYFAYIDEEGNASKPF 438

Query: 432 NTPAYASD 439
             P   +D
Sbjct: 439 LLPQKDTD 446


>gi|261416614|ref|YP_003250297.1| hypothetical protein Fisuc_2229 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373070|gb|ACX75815.1| hypothetical protein Fisuc_2229 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 1179

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 73/221 (33%), Gaps = 24/221 (10%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G F + I +       G     + V D    N   LT   D +   P F+     + 
Sbjct: 416 SVHGPFLTYISY-QNRDKDGHAHFDVAVSD-TSKNEATLTYLTDAV--YPSFNKQGTSIV 471

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFR------------SMILAPRFSSNGKRALIS 275
           +   +      V           K                    I +P+FS +GKR   S
Sbjct: 472 FVRREPFSTRFVLSKVPFSSDLKKISAEDPIDIFKPDSSLLYYNIYSPKFSPDGKRIAFS 531

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D    I  VD      + ++   +     ++  D+ +I+F S+R     L     N 
Sbjct: 532 FFDDTQRGIAVVDTNGANFKIVSTAGYDERDVNWI-DNDKIIFASNRNNIFNLIEKDLNT 590

Query: 336 SDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKFAIG 374
             ++ ++     +     ++P   GD I FT++  + F++ 
Sbjct: 591 GKERALT-----NVVGGAFTPTLAGDTIFFTQYDKDGFSLY 626



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 40/224 (17%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDE 280
              + Y +Y + D       D  +    K       +  A  P F+  G   +   ++  
Sbjct: 419 GPFLTYISYQNRDKDGHAHFDVAVSDTSKNEATLTYLTDAVYPSFNKQGTSIVFVRREPF 478

Query: 281 AMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +       +  S+  ++++    I+I   + PDSS + +                     
Sbjct: 479 STRFVLSKVPFSSDLKKISAEDPIDI---FKPDSSLLYY--------------------- 514

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WS 398
                   + + P +SP G  IAF+ F   +  I V+  +G+  +++      +    W 
Sbjct: 515 --------NIYSPKFSPDGKRIAFSFFDDTQRGIAVVDTNGANFKIVSTAGYDERDVNWI 566

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
                +IF+  ++      L   DLN G+   L N    A  P 
Sbjct: 567 -DNDKIIFASNRNN--IFNLIEKDLNTGKERALTNVVGGAFTPT 607


>gi|328907721|gb|EGG27485.1| WD40-like protein [Propionibacterium sp. P08]
          Length = 1113

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 71/193 (36%), Gaps = 21/193 (10%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   +     D    ++ V +      RLTN   +  +  +SP+ ++I + S    
Sbjct: 33  PDVHGDLVVFIADDD----VWLVPITGGRASRLTNDHVMARNPRFSPNGAKIAWTSYLGQ 88

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A      W    + + FT            +  +  DG
Sbjct: 89  RPEVFVIDLATGDQRRLTWLGAARNLVVGWQDD-EHVVFTSPHQSNDIGLTWLYTVSLDG 147

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLI 431
           + ERL       L   S+      +P+ G    + R + G T ++++       N   L+
Sbjct: 148 NVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWLRPAGADNFLRLL 206

Query: 432 NTPAYASDPQWVG 444
                  D ++  
Sbjct: 207 RDGNDDYDGRYAA 219



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 47/228 (20%), Positives = 83/228 (36%), Gaps = 36/228 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M   PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 54  TGGRASRLTNDHVMARNPRFSPNGAKIAWTSYLGQRPEVFVIDLATGDQRRLTWLGAARN 113

Query: 306 SASYSPDSSQIVFESDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +  +     LY +  +G + +R+         D   S  G + 
Sbjct: 114 LVVGWQDDEHVVFTSPHQSNDIGLTWLYTVSLDG-NVERL---GYGPGMDLAVSSDGAVA 169

Query: 362 AFT----------KFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRS------ 403
             T          ++ G   A   ++  G+    RLL + ++     ++ +GR       
Sbjct: 170 VVTPNSGDCSRWKRYRGGTAAQIWLRPAGADNFLRLLRDGNDDYDGRYAAAGRYGVGWID 229

Query: 404 --LIFSRK-KDGD---TGSKLYSIDLNGRNETL----INTPAYASDPQ 441
             LIFS    DGD     ++L+S++  G +            Y  DP+
Sbjct: 230 GRLIFSSDMSDGDCPQAQAQLWSVNGRGHDLCQHTHHGPKQGYVRDPR 277



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 58/184 (31%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L        +    +   + A+ +PD  ++   S      ++
Sbjct: 376 QGVWASDVDGEDCLEVANLDGTGEIRHVAQGQIGRVLHAAPAPDGKKVALISH---DGRI 432

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQER 384
            ++       + + +  E       WSP    + +        G    I    + G+ E 
Sbjct: 433 LIVTIADGTTREVGKSVEGEATGLAWSPDSRYLVWRSPMATGEGMIGQIRCWDEQGAGES 492

Query: 385 --LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 493 VALTRGTFDDSTPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 551

Query: 442 WVGF 445
              F
Sbjct: 552 -SPF 554



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 59/179 (32%), Gaps = 14/179 (7%)

Query: 193 LCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L V + DG   IR++   +   +     +P+ +KVA  ++D     R+ ++        +
Sbjct: 389 LEVANLDGTGEIRHVAQGQIGRVLHAAPAPDGKKVALISHDG----RILIVTIADGTTRE 444

Query: 252 RIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSV---DLQS-NATERLTNTLFINIS 306
              +         +S + +  +  S        I  +   D Q    +  LT   F + +
Sbjct: 445 VGKSVEGEATGLAWSPDSRYLVWRSPMATGEGMIGQIRCWDEQGAGESVALTRGTFDDST 504

Query: 307 ASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQGDLI 361
             ++ D   +   S R  +          +    +R  +             SPQG  I
Sbjct: 505 PVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEASPFGPSPQGWRI 563


>gi|332159173|ref|YP_004424452.1| acylamino acid-releasing enzyme [Pyrococcus sp. NA2]
 gi|331034636|gb|AEC52448.1| acylamino acid-releasing enzyme [Pyrococcus sp. NA2]
          Length = 631

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 98/312 (31%), Gaps = 52/312 (16%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F  +++F    +          +   DG  +R  T         PRFSP+ + +A+ + 
Sbjct: 20  AFKRKVVFQVTEISLEKDDYFSKLYLYDGKRVRQFTSGDK--DGNPRFSPDGKFIAFTSK 77

Query: 232 DDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISV-------------- 276
            D++     L     D    + +  F++ I   RF+ +GK   +                
Sbjct: 78  RDKESKEGELYIIPTDGGEARLVARFKNGIKDFRFAESGKEIAVITPIEVEKKKDDVHII 137

Query: 277 -----QKDEAMDI-------YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
                  + A  I       Y V++++    R+T      +S  +       + + DRE 
Sbjct: 138 REIPFWFNGAGWIYGKRNVVYIVNVENGRKRRITPKNLDVLSLRFHKGKLYFIAQEDRER 197

Query: 325 KEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFSGEKFAIGVMKKD 379
           K  +  V   +G   +RI+        D V    G  I       +       I     +
Sbjct: 198 KPMISDVYVLDGKKVQRITP-GMWRILDFVPLNDGTFILKANTLERGLATNAHIYHFNPE 256

Query: 380 GSQERLLVED--------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             + R L  D               + +A      G  + +         + L+ ++L G
Sbjct: 257 TQELRKLTRDLDRSAYNSLNSDVRGSQRAELIFKDG-WVYYVATDGPR--ANLFRVNLEG 313

Query: 426 RNETLINTPAYA 437
           + E ++      
Sbjct: 314 KVERIVGGDRSV 325


>gi|297722933|ref|NP_001173830.1| Os04g0278101 [Oryza sativa Japonica Group]
 gi|255675272|dbj|BAH92558.1| Os04g0278101 [Oryza sativa Japonica Group]
          Length = 378

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 63/345 (18%), Positives = 101/345 (29%), Gaps = 71/345 (20%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
            P     F    S GA  LV       G D   +E  + D+ D K      +F       
Sbjct: 25  TPRGFHAFTPAASPGAPGLVAVATRLAGSDYRHIE--VIDMSDDK----NAYFEVTRPVA 78

Query: 153 KIAHTISDDI--------YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
              H  +  I        Y    G +G+ +S +L  +          SL  +D      R
Sbjct: 79  PRVHRFNPFISLDGARVGYHRCWG-RGNGDSPLLLENIKSPVPADTFSLFRIDGSFPPSR 137

Query: 205 YLTPSR----------------------DQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
                                       ++        P+    A  + + + +      
Sbjct: 138 TTARRSRSSGCRGYLLRERLPDVVGLEEERRDIHTSIGPD---FAIESTEVDVVAISLGD 194

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D     + K++         P    +GK                 D ++    RLT   +
Sbjct: 195 DDDKTISMKKLTVGDENNAFPSPPPDGKWL---------------DGEAGGIRRLTEGPW 239

Query: 303 INISASYSPDSSQIVFESDR----EGKEQLYVM-QSNGSDQKRISQDKEASYFD--PVWS 355
            +   ++SPD   I F SDR     G   + V     GSD K +    + +     PV +
Sbjct: 240 SDTMCNWSPDDEWIAFASDRHAPGSGSFAIMVHPNGTGSDSKSLVFTSDYAAVSAEPVSN 299

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSP 399
           P         +      I  +  DGS  R L  +S     P+W+P
Sbjct: 300 P-------HHYQPYG-EIYTVDIDGSNIRRLTHNSFEDGTPSWTP 336



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 48/347 (13%), Positives = 94/347 (27%), Gaps = 97/347 (27%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL---FEPRF 219
           + + T         ++ V+  +     ++   +   D  N  +            F P  
Sbjct: 29  FHAFTPAASPGAPGLVAVATRLAGSDYRHIEVIDMSDDKNAYFEVTRPVAPRVHRFNPFI 88

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS---SNG------- 269
           S +  +V Y                    +P  + N +S + A  FS    +G       
Sbjct: 89  SLDGARVGYHRCWGRG----------NGDSPLLLENIKSPVPADTFSLFRIDGSFPPSRT 138

Query: 270 --KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
             +R+  S  +   +     D+     ER       +I  S  PD      ES       
Sbjct: 139 TARRSRSSGCRGYLLRERLPDVVGLEEER------RDIHTSIGPD---FAIESTEVDVVA 189

Query: 328 LYVMQSNGS--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + +   +      K+++   E + F P   P G  +                 +    R 
Sbjct: 190 ISLGDDDDKTISMKKLTVGDENNAF-PSPPPDGKWL---------------DGEAGGIRR 233

Query: 386 LVED-SNLQAPTWSPSGRSLIFSRKKDGDTG----------------------------- 415
           L E   +     WSP    + F+  +                                  
Sbjct: 234 LTEGPWSDTMCNWSPDDEWIAFASDRHAPGSGSFAIMVHPNGTGSDSKSLVFTSDYAAVS 293

Query: 416 -------------SKLYSIDLNGRNETLINTPAY-ASDPQWVG-FMD 447
                         ++Y++D++G N   +   ++    P W   F+D
Sbjct: 294 AEPVSNPHHYQPYGEIYTVDIDGSNIRRLTHNSFEDGTPSWTPYFLD 340


>gi|37523230|ref|NP_926607.1| WD-40 repeat-containing protein [Gloeobacter violaceus PCC 7421]
 gi|35214233|dbj|BAC91602.1| WD-40 repeat protein [Gloeobacter violaceus PCC 7421]
          Length = 1682

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 89/259 (34%), Gaps = 52/259 (20%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +R         +   RFSP+   VA  +  D+   R++   +R  +    +      ++ 
Sbjct: 1371 LRRTLYGHTDGVLSARFSPDGALVA--SAGDDRTTRLW---SRDGKPLAILRGHAQAVIE 1425

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS-------- 314
              FS  G R   +   D  + ++  D    A  +L+       S  YSPD          
Sbjct: 1426 VAFSPKGDRLA-TGGGDGTVRLWRRD--GTALGQLSGHSGPVHSLHYSPDGQILAAAGET 1482

Query: 315  ----------------------QIVFE--SDR----EGKEQLYVMQSNGSDQKRISQDKE 346
                                  ++ F    DR     G   + + + +G+   ++S    
Sbjct: 1483 VRLWNAQGILQAAFGGTPGGVLEVAFSPKGDRLATGGGDGTVRLWRRDGTALGQLS-GHS 1541

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLI 405
                   +SP G ++A    +GE+  + + + DG   +     ++      +SP GR+L 
Sbjct: 1542 GPVHSLHYSPDGQILA---AAGEEGMVRIWEADGLLRQNWAAHTDWIGALAFSPDGRTLA 1598

Query: 406  FSRKKDGDTGSKLYSIDLN 424
                   D   KL+S+D  
Sbjct: 1599 ---TAGHDRLVKLWSLDGT 1614



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 95/272 (34%), Gaps = 20/272 (7%)

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            +   +G ++ R      ++ +      + V   +G  +R L    + +     FSP+   
Sbjct: 1171 LRHPRGVYDVRFSPGEATLATASSDGCVRVWSIEGRLLRTLADPGNPVFAL-AFSPDGDL 1229

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +A A+ D    +R++  D R+    +     R   LA   S +G+    S  +  A+ ++
Sbjct: 1230 IAAASAD--GAIRLWRRDGRLGATLR---GHRDWALAVAVSPDGRVIA-SGDRTGAVRLW 1283

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            S   + +  + L        + ++SPD + +       G ++   +         + Q  
Sbjct: 1284 S--REGHGLKSLRGHSEAVFAVAFSPDGALLA----TAGFDRTVRLWRPDGTPAGVLQGH 1337

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +      +   G  +A            +      +  L      + +  +SP G  + 
Sbjct: 1338 SSDITSLSFGGDGQTLATASLDRTVRLWRLQPP--LRRTLYGHTDGVLSARFSPDGALVA 1395

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                   D  ++L+S   +G+   ++   A A
Sbjct: 1396 ---SAGDDRTTRLWS--RDGKPLAILRGHAQA 1422



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 82/234 (35%), Gaps = 22/234 (9%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            + +  RDG     L   RD  L     SP+ + +A  + D    +R++   +R     K 
Sbjct: 1239 IRLWRRDGRLGATLRGHRDWALAV-AVSPDGRVIA--SGDRTGAVRLW---SREGHGLKS 1292

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +      + A  FS +G     +   D  + ++  D        L        S S+  D
Sbjct: 1293 LRGHSEAVFAVAFSPDGALLA-TAGFDRTVRLWRPD--GTPAGVLQGHSSDITSLSFGGD 1349

Query: 313  SSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
               +   S DR    +L+ +Q      +R             +SP G L+A    +G+  
Sbjct: 1350 GQTLATASLDR--TVRLWRLQP---PLRRTLYGHTDGVLSARFSPDGALVA---SAGDDR 1401

Query: 372  AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               +  +DG    +L   +  +    +SP G  L       GD   +L+  D  
Sbjct: 1402 TTRLWSRDGKPLAILRGHAQAVIEVAFSPKGDRLA---TGGGDGTVRLWRRDGT 1452



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 87/227 (38%), Gaps = 21/227 (9%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--I 260
             ++      Q +    FSP    +A  + D    +R++  D  + R    + +       
Sbjct: 1080 QQWNRIEHPQWVTSVAFSPGAALLASGSVD--GQVRLWRPDGTLVRKIAALASSTDHKPN 1137

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFE 319
            L  RFS +G    ++ + D  + +     +      L +     ++   +SP  + +   
Sbjct: 1138 LQVRFSPDGGLLAVA-RDDGIVALQR--SEGGPVTTLRHPRGVYDV--RFSPGEATLA-T 1191

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            +  +G  +++ ++       R   D     F   +SP GDLIA     G   AI + ++D
Sbjct: 1192 ASSDGCVRVWSIE---GRLLRTLADPGNPVFALAFSPDGDLIAAASADG---AIRLWRRD 1245

Query: 380  GSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            G     L    +   A   SP GR +  S  + G    +L+S + +G
Sbjct: 1246 GRLGATLRGHRDWALAVAVSPDGRVIA-SGDRTG--AVRLWSREGHG 1289



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 57/136 (41%), Gaps = 9/136 (6%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + + +G    ++ +  RDG  +  L+      +    +SP+ Q +A     +E ++R++ 
Sbjct: 1513 DRLATGGGDGTVRLWRRDGTALGQLS-GHSGPVHSLHYSPDGQILA--AAGEEGMVRIWE 1569

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D  + +      ++     A  FS +G+    +   D  + ++S+D      + L    
Sbjct: 1570 ADGLLRQNWAAHTDWIG---ALAFSPDGRTLA-TAGHDRLVKLWSLD--GTLLKVLEGHT 1623

Query: 302  FINISASYSPDSSQIV 317
                S  +SPDS  ++
Sbjct: 1624 APVTSVGFSPDSRTVI 1639


>gi|332661784|ref|YP_004451254.1| (myosin heavy-chain) kinase [Haliscomenobacter hydrossis DSM 1100]
 gi|332337281|gb|AEE54381.1| (Myosin heavy-chain) kinase [Haliscomenobacter hydrossis DSM 1100]
          Length = 1475

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/320 (15%), Positives = 110/320 (34%), Gaps = 21/320 (6%)

Query: 88   KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
             +KI +  S    ++W+    + L T   +       +V +      D K+I+      +
Sbjct: 1008 GKKILSGSSGSTVKEWSVESGECLQTLETLPGKSQDYKVSYS----PDGKKILSGSLDDT 1063

Query: 148  PASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYL 206
               W       S +  Q++ G  G   S       + ++SG    ++             
Sbjct: 1064 VKEWSAE----SGECLQTLQGHSGAVRSVCYSPDGKKILSGSWDRTVKEWSVGSGECLQT 1119

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                D  +    +SP+ +K+   ++D      +     + +   + +      + +  +S
Sbjct: 1120 LQGNDNCVHSVCYSPDGKKILSGSWDR----TIKEWSVKSEECLQILQGHSDRVNSVFYS 1175

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             +GK+ L S   D+++  +SV       + L        S  YSPD  +I+  S   G  
Sbjct: 1176 LDGKKIL-SGSDDKSVKEWSVS-SGECLQTLQGHDGNVYSVCYSPDGKKIL--SGSWGGI 1231

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                + ++G   + +        +   +SP G  I        +  +      G   ++ 
Sbjct: 1232 VKEWLVASGECLQTLHLQNSGMVYSVSYSPDGKRIL---SGPGQAVVEWSAASGECLQIR 1288

Query: 387  V-EDSNLQAPTWSPSGRSLI 405
                  + +  +SP G+ ++
Sbjct: 1289 RGHSHLVTSVCYSPDGKKIL 1308



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 76/239 (31%), Gaps = 31/239 (12%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +SP+ +K+   + DD     V           + +      + +  +S +GK+ L S  
Sbjct: 1047 SYSPDGKKILSGSLDD----TVKEWSAESGECLQTLQGHSGAVRSVCYSPDGKKIL-SGS 1101

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  +  +SV   S    +        + S  YSPD  +I+  S       +        
Sbjct: 1102 WDRTVKEWSV--GSGECLQTLQGNDNCVHSVCYSPDGKKILSGS---WDRTIKEWSVKSE 1156

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAP 395
            +  +I Q          +S  G  I             V    G   + L   D N+ + 
Sbjct: 1157 ECLQILQGHSDRVNSVFYSLDGKKILSGSDDKSVKEWSV--SSGECLQTLQGHDGNVYSV 1214

Query: 396  TWSPSGRSLI-----------------FSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             +SP G+ ++                   +         +YS+  +   + +++ P  A
Sbjct: 1215 CYSPDGKKILSGSWGGIVKEWLVASGECLQTLHLQNSGMVYSVSYSPDGKRILSGPGQA 1273



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 80/234 (34%), Gaps = 14/234 (5%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             +   +  +    +SP+ +K+   ++D      +           + +      + +  +
Sbjct: 824  FSQGHNNGVTSVCYSPDGKKILSGSHDR----MIKEWSVGSGECLQTLQGHSDEVQSVCY 879

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S +GK+ L S   D  +  +SV+      + L        S  YSPD  +I+  S     
Sbjct: 880  SPDGKKIL-SGSDDRTVKEWSVE-SGQCLQTLQGHSDEVQSVCYSPDGKKILSGSR---D 934

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            + +        +  +  +          +SP G  I    F        V    G   + 
Sbjct: 935  DSVKEWSVESGECLQTLRGHSHWVKSVCYSPSGKKILSGSFDKTVKEWSV--GSGECLQT 992

Query: 386  LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            L     + +  +SP G+ ++      G T  + +S++     +TL   P  + D
Sbjct: 993  LQVKYEVISVCYSPDGKKIL--SGSSGSTVKE-WSVESGECLQTLETLPGKSQD 1043



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 67/202 (33%), Gaps = 11/202 (5%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                     +    +SP+ +K+        D   V        +  + +      + +  
Sbjct: 865  QTLQGHSDEVQSVCYSPDGKKI----LSGSDDRTVKEWSVESGQCLQTLQGHSDEVQSVC 920

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +S +GK+ L S  +D+++  +SV+      + L        S  YSP   +I+  S    
Sbjct: 921  YSPDGKKIL-SGSRDDSVKEWSVE-SGECLQTLRGHSHWVKSVCYSPSGKKILSGSF--- 975

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQE 383
             ++     S GS +   +   +       +SP G  I             V   +     
Sbjct: 976  -DKTVKEWSVGSGECLQTLQVKYEVISVCYSPDGKKILSGSSGSTVKEWSVESGECLQTL 1034

Query: 384  RLLVEDSNLQAPTWSPSGRSLI 405
              L   S     ++SP G+ ++
Sbjct: 1035 ETLPGKSQDYKVSYSPDGKKIL 1056



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 55/186 (29%), Gaps = 13/186 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++            +       +    +S + +K+   + D      V      
Sbjct: 1141 SGSWDRTIKEWSVKSEECLQILQGHSDRVNSVFYSLDGKKILSGSDDK----SVKEWSVS 1196

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFIN 304
                 + +      + +  +S +GK+ L S      +  + V       + L      + 
Sbjct: 1197 SGECLQTLQGHDGNVYSVCYSPDGKKIL-SGSWGGIVKEWLV-ASGECLQTLHLQNSGMV 1254

Query: 305  ISASYSPDSSQIVFESDREGKEQLYV-MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S SYSPD  +I+      G  Q  V   +   +  +I +          +SP G  I  
Sbjct: 1255 YSVSYSPDGKRIL-----SGPGQAVVEWSAASGECLQIRRGHSHLVTSVCYSPDGKKILS 1309

Query: 364  TKFSGE 369
                  
Sbjct: 1310 GSHDNS 1315



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 73/221 (33%), Gaps = 12/221 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    S+                 D  ++   +SP+ +K+   ++    I++ +L+ + 
Sbjct: 1183 SGSDDKSVKEWSVSSGECLQTLQGHDGNVYSVCYSPDGKKILSGSW--GGIVKEWLVASG 1240

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                   + N   M+ +  +S +GKR    +       +          +       +  
Sbjct: 1241 ECLQTLHLQNS-GMVYSVSYSPDGKRI---LSGPGQAVVEWSAASGECLQIRRGHSHLVT 1296

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S  YSPD  +I+  S       +        +  +I +   +S     +S  G  I    
Sbjct: 1297 SVCYSPDGKKILSGSH---DNSVREWSMESKECLQILRGHSSSVSSVCYSSDGKKILSGS 1353

Query: 366  FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
            +        V  + G   + L      + +  +SP G+ ++
Sbjct: 1354 WDETVKEWSV--ESGECLQTLRGHSHRVTSVCYSPDGKKIL 1392



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 76/222 (34%), Gaps = 13/222 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++     +              +    +SP+ +K+   + DD     V      
Sbjct: 888  SGSDDRTVKEWSVESGQCLQTLQGHSDEVQSVCYSPDGKKILSGSRDD----SVKEWSVE 943

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 + +      + +  +S +GK+ L S   D+ +  +SV   S    +     +  I
Sbjct: 944  SGECLQTLRGHSHWVKSVCYSPSGKKIL-SGSFDKTVKEWSV--GSGECLQTLQVKYEVI 1000

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFT 364
            S  YSPD  +I+  S   G         +G   + + +   ++  +   +SP G  I   
Sbjct: 1001 SVCYSPDGKKIL--SGSSGSTVKEWSVESGECLQTLETLPGKSQDYKVSYSPDGKKILSG 1058

Query: 365  KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
                         + G   + L      +++  +SP G+ ++
Sbjct: 1059 SLDDTVKEWSA--ESGECLQTLQGHSGAVRSVCYSPDGKKIL 1098


>gi|291567903|dbj|BAI90175.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 1433

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 81/227 (35%), Gaps = 22/227 (9%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G  +          +     +P+ ++    ++DD     + L D    R    +    S 
Sbjct: 801  GGPLIRTLTGHSDRVRAVAIAPDGKRAVSGSWDD----TLKLWDLEQGRELATLSGHSSS 856

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + A   + +GKR  +S   D  + ++ ++ Q      L+       + + +PD  + V  
Sbjct: 857  VTAVAIAPDGKR-AVSASADYTLKLWDLE-QGRELATLSGHSDWVRAVAIAPDGKRAVSA 914

Query: 320  SDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD    E L +     G +   +S    + Y   + +P G   A +    +   +     
Sbjct: 915  SD---DETLKLWDLEQGRELATLSGHSGSVYAVAIIAPDGKR-AVSASDDKTLKLW---- 966

Query: 379  DGSQERLLVEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSI 421
            D  Q R L   S  +   W    +P G+  + + +   D   KL+ +
Sbjct: 967  DLEQGRELATLSGHRDSVWAVAIAPDGKRAVSASR---DKTLKLWDL 1010



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/314 (15%), Positives = 102/314 (32%), Gaps = 43/314 (13%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      +  V        +LWD++  +++                H  SD +      
Sbjct: 986  AVAIAPDGKRAVSASRDKTLKLWDLEQGRELATLS-----------GH--SDWVNAVAIA 1032

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G          +  VS     +L + D + G  +  L+     +      +P+ ++  
Sbjct: 1033 PDG----------KRAVSASADETLKLWDLEQGRELATLSGHSSWVNAVAIIAPDGKRAV 1082

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             A+ D      + L D    R    +    S +LA   + +GKR  +S   D  + ++ +
Sbjct: 1083 SASADK----TLKLWDLEQGRELATLSGHSSGVLAVAIAPDGKR-AVSASLDNTLKLWDL 1137

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            + Q      L+      ++ + +PD  + V  S       L +       +         
Sbjct: 1138 E-QGRELATLSGHSSGVLAVAIAPDGKRAVSAS---ADYTLKLWDLEQGRELATLSGHSY 1193

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                   +P G   A +    E   +  +++      L    S ++A   +P G+  + +
Sbjct: 1194 WVNAVAIAPDGKR-AVSASDDETLKLWDLEQGRELATLSGHSSYVRAVAIAPDGKRAVSA 1252

Query: 408  RKKDGDTGSKLYSI 421
             +   D   KL+ +
Sbjct: 1253 SE---DNTLKLWDL 1263



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 85/267 (31%), Gaps = 39/267 (14%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      +  V        +LWD++  +++         +  R +A  I+ D       
Sbjct: 1197 AVAIAPDGKRAVSASDDETLKLWDLEQGRELA--TLSGHSSYVRAVA--IAPD------- 1245

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                         +  VS    N+L + D +              +     +P+ ++   
Sbjct: 1246 ------------GKRAVSASEDNTLKLWDLEQGRELATLSGHSHWVTAVAIAPDGKRAVS 1293

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            A+ D      + L D    R    +      + A   + +GKR  +S   D+ + ++ ++
Sbjct: 1294 ASAD----YTLKLWDLEQGRELATLSGHSGWVRAVAIAPDGKR-AVSASADKTLKLWDLE 1348

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             Q      L+       + + +PD  + V  SD    + L +      ++   S   +  
Sbjct: 1349 -QGRELATLSGHSDEVNAVAIAPDGKRAVSASD---DKTLKLWDLATGEEIA-SFTADTG 1403

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                  +P G  +     SG    + +
Sbjct: 1404 VLACAVAPDGVTLVAGDRSGRVHFLRL 1430


>gi|220915957|ref|YP_002491261.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219953811|gb|ACL64195.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 653

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 80/212 (37%), Gaps = 12/212 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK--RALISVQ 277
           SP+ + +   T       +++L+        +++      +    F   G+  R L    
Sbjct: 61  SPDGRAML-VTTRFGSTAQLHLV-LAPLGMREQLTFGDEPVSDAAFLP-GRPERLLYLQD 117

Query: 278 KDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKE-QLYVMQS 333
           K       +Y +D ++  +E LT+    +     SPD  ++ +  + R GK+  +YV ++
Sbjct: 118 KGGGEFFQLYGLDRRTGRSELLTDGRSRHSDLVVSPDGRRLAYSGTGRNGKDADVYVAEA 177

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQER-LLVEDSN 391
           +     R   + E S+    +S  G  +   ++       + ++         LL    +
Sbjct: 178 DRPGAARRVVEAEGSWSALDFSRDGRRLLVRRYRAASDADLELVDLATGARTPLLAGKGS 237

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +    +S  GR   ++    G   + L  +DL
Sbjct: 238 VGGAAFSADGRY-AYAITDRGAGHAALVRVDL 268



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 78/182 (42%), Gaps = 10/182 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD-SSQIVFESDRE 323
            S +G+  L++ +      ++ V       E+LT        A++ P    ++++  D+ 
Sbjct: 60  VSPDGRAMLVTTRFGSTAQLHLVLAPLGMREQLTFGDEPVSDAAFLPGRPERLLYLQDKG 119

Query: 324 GKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKD 379
           G E  QLY +       + ++ D  + + D V SP G  +A+  T  +G+   + V + D
Sbjct: 120 GGEFFQLYGLDRRTGRSELLT-DGRSRHSDLVVSPDGRRLAYSGTGRNGKDADVYVAEAD 178

Query: 380 --GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAY 436
             G+  R++  + +  A  +S  GR L+  R +   + + L  +DL  G    L+     
Sbjct: 179 RPGAARRVVEAEGSWSALDFSRDGRRLLVRRYRAA-SDADLELVDLATGARTPLLAGKGS 237

Query: 437 AS 438
             
Sbjct: 238 VG 239



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 52/329 (15%), Positives = 100/329 (30%), Gaps = 69/329 (20%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA-TYDDE 234
           R+L++ +    G     L  +DR       LT  R +   +   SP+ +++AY+ T  + 
Sbjct: 111 RLLYLQDKG--GGEFFQLYGLDRRTGRSELLTDGRSR-HSDLVVSPDGRRLAYSGTGRNG 167

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNA 293
               VY+ +     A +R+        A  FS +G+R L+   +     D+  VDL + A
Sbjct: 168 KDADVYVAEADRPGAARRVVEAEGSWSALDFSRDGRRLLVRRYRAASDADLELVDLATGA 227

Query: 294 TERLTNTLFINISASYSPDSSQ-------------------------------------- 315
              L         A++S D                                         
Sbjct: 228 RTPLLAGKGSVGGAAFSADGRYAYAITDRGAGHAALVRVDLAQPEAAPRPVAPGVAWDVE 287

Query: 316 ---------IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
                    + F +D +G   L+V+       + ++            S + DL+A    
Sbjct: 288 QVVVARDGTVAFTADADGVSLLHVVDPRTGRLRGVALPGRGVATLRFPSGRSDLLAVGLV 347

Query: 367 SGEK-FAIGVMKKDGSQERLLV-------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           S    +    ++  G +            + +    P        + +      +  + L
Sbjct: 348 SATSPWDAWTVELRGGKAVRWTRSEVGGLDPAGFVEP------ERVRYPSAGGAEVPALL 401

Query: 419 YSIDLNGRNETLIN---TPAYASDPQWVG 444
           Y     GR   ++N    P     P +  
Sbjct: 402 YRPRGGGRVPVVVNWHGGPESQHRPAFSP 430



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 52/141 (36%), Gaps = 10/141 (7%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   ++  +      QL+++ +    +++++   E          + + + + +  G 
Sbjct: 61  SPDGRAMLVTTRFGSTAQLHLVLAPLGMREQLTFGDEPVSDAAFLPGRPERLLYLQDKGG 120

Query: 370 K--FAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLN-- 424
              F +  + +   +  LL +  +  +    SP GR L +S        + +Y  + +  
Sbjct: 121 GEFFQLYGLDRRTGRSELLTDGRSRHSDLVVSPDGRRLAYSGTGRNGKDADVYVAEADRP 180

Query: 425 GRNETLINTPAYASDPQWVGF 445
           G    ++      ++  W   
Sbjct: 181 GAARRVVE-----AEGSWSAL 196


>gi|269837810|ref|YP_003320038.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269787073|gb|ACZ39216.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 434

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 44/103 (42%), Gaps = 10/103 (9%)

Query: 296 RLTNTLFINISA-----SYSPDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEA 347
           +LT+    +        S+SPD +++V+ S+R+    + +L+++     +   ++     
Sbjct: 41  QLTDGECDDTGHAADVYSFSPDGTRVVYCSNRDTDLNQRRLWIVDLERGESTLLTP-GPG 99

Query: 348 SYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVED 389
           +     WSP G  IA+      E   I ++  +  + R +   
Sbjct: 100 TDSCASWSPDGRWIAYVHCGPYESADIWLVNPESGERRQVSRS 142



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 41/86 (47%), Gaps = 8/86 (9%)

Query: 264 RFSSNGKRALISVQKDEAMD---IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            FS +G R +    +D  ++   ++ VDL+   +  LT     +  AS+SPD   I +  
Sbjct: 58  SFSPDGTRVVYCSNRDTDLNQRRLWIVDLERGESTLLTPGPGTDSCASWSPDGRWIAYV- 116

Query: 321 DREGKEQ---LYVMQSNGSDQKRISQ 343
              G  +   ++++     +++++S+
Sbjct: 117 -HCGPYESADIWLVNPESGERRQVSR 141



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 11/93 (11%), Positives = 31/93 (33%), Gaps = 5/93 (5%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
           D   +     +SP G  + +         +  + ++  +  +  LL          +WSP
Sbjct: 49  DTGHAADVYSFSPDGTRVVYCSNRDTDLNQRRLWIVDLERGESTLLTPGPGTDSCASWSP 108

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            GR + +         + ++ ++        ++
Sbjct: 109 DGRWIAYV-HCGPYESADIWLVNPESGERRQVS 140



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 39/92 (42%), Gaps = 2/92 (2%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISV 276
            FSP+  +V Y +  D D+ +  L    ++R     +           +S +G+      
Sbjct: 58  SFSPDGTRVVYCSNRDTDLNQRRLWIVDLERGESTLLTPGPGTDSCASWSPDGRWIAYVH 117

Query: 277 QKD-EAMDIYSVDLQSNATERLTNTLFINISA 307
               E+ DI+ V+ +S    +++ ++  +++ 
Sbjct: 118 CGPYESADIWLVNPESGERRQVSRSMPESLTP 149



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 34/83 (40%), Gaps = 2/83 (2%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +R+++ S +  + + +  L ++D +      LTP          +SP+ + +AY      
Sbjct: 64  TRVVYCS-NRDTDLNQRRLWIVDLERGESTLLTPGPGTDSCA-SWSPDGRWIAYVHCGPY 121

Query: 235 DILRVYLMDTRIDRAPKRIGNFR 257
           +   ++L++       +   +  
Sbjct: 122 ESADIWLVNPESGERRQVSRSMP 144


>gi|218130617|ref|ZP_03459421.1| hypothetical protein BACEGG_02206 [Bacteroides eggerthii DSM 20697]
 gi|217986961|gb|EEC53292.1| hypothetical protein BACEGG_02206 [Bacteroides eggerthii DSM 20697]
          Length = 660

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/298 (11%), Positives = 83/298 (27%), Gaps = 35/298 (11%)

Query: 126 VEFRLWDVKDR-KQIIGKKFFSSPASWRKIAHT-ISDDIYQSITGEKGDFNSRILFVSES 183
           +   L+D+    +Q     FF+       + H  I++ I + ++   G ++         
Sbjct: 346 LRVELYDLTTEFRQSNSFPFFTHDEHMNVVGHQLIAERIVKELSSISGGYD--------Y 397

Query: 184 VVSGIIKNSLCVMDRDGA--------------------NIRYLTPSRDQILFEPRFSPNQ 223
           +  G        +  DG                       R         L  P  S + 
Sbjct: 398 LSEGNYHERYPTIHADGTMVYQSQTEHYYTINRLNMNNGYREELWRGVSELVHPMISNDG 457

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEA 281
           + + +   + E +    ++          I    +    P  + +  +        +   
Sbjct: 458 RYLVFTEGEQESLNTDVILYDFFKGHQVAINKKPAKGAIPCVNKSATKIAFPSWTMEHTT 517

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKR 340
             I   D+ +    +  + +       +S D   I +           +   +  + +K 
Sbjct: 518 PSIVLYDIATGRQTQFEDGV-ECWRPVFSNDDRHIYYIQKETQDSHFVIKSYDVATGKKC 576

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTW 397
           +        +D   SP G  IA+       + + +   +  Q R +     +   P +
Sbjct: 577 VVLKHPYDIWDIAVSPSGKYIAYAGNKDTNWDLFIYDIEQKQSRQITHTLGDEWDPAF 634



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 4/160 (2%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            ++I F S ++        L     D A  R          + P FS + + + Y   + 
Sbjct: 503 ATKIAFPSWTMEHTTPSIVL----YDIATGRQTQFEDGVECWRPVFSNDDRHIYYIQKET 558

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +D   V             +      I     S +GK    +  KD   D++  D++   
Sbjct: 559 QDSHFVIKSYDVATGKKCVVLKHPYDIWDIAVSPSGKYIAYAGNKDTNWDLFIYDIEQKQ 618

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           + ++T+TL      ++     ++ F       + +Y ++ 
Sbjct: 619 SRQITHTLGDEWDPAFGISDDELWFAGVFGINDGIYHIKL 658



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 94/287 (32%), Gaps = 13/287 (4%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            IS ++ + +  E       I     + +   + N+L V   D       + S       
Sbjct: 310 QISPELLKEVLDEYNISKEEIDLSIPNKLCQSVANALRVELYDLTTEFRQSNS------F 363

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P F+ ++              R+    + I      +         P   ++G   +   
Sbjct: 364 PFFTHDEHMNVVGHQLI--AERIVKELSSISGGYDYLSEGNYHERYPTIHADGT-MVYQS 420

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           Q +    I  +++ +   E L   +   +    S D   +VF    +      V+  +  
Sbjct: 421 QTEHYYTINRLNMNNGYREELWRGVSELVHPMISNDGRYLVFTEGEQESLNTDVILYDFF 480

Query: 337 DQKRISQDKEASYFD-PVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQ 393
              +++ +K+ +    P  +     IAF  ++      +I +      ++    +     
Sbjct: 481 KGHQVAINKKPAKGAIPCVNKSATKIAFPSWTMEHTTPSIVLYDIATGRQTQFEDGVECW 540

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASD 439
            P +S   R + + +K+  D+   + S D+  G+   ++  P    D
Sbjct: 541 RPVFSNDDRHIYYIQKETQDSHFVIKSYDVATGKKCVVLKHPYDIWD 587


>gi|154495052|ref|ZP_02034057.1| hypothetical protein PARMER_04098 [Parabacteroides merdae ATCC
           43184]
 gi|154085602|gb|EDN84647.1| hypothetical protein PARMER_04098 [Parabacteroides merdae ATCC
           43184]
          Length = 492

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 88/272 (32%), Gaps = 49/272 (18%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I       + +        +  K+ +    +     + +   +I++   +     S ++ 
Sbjct: 166 IENKMSGNNCVNCHSFCMQDPNKMLF-HMRETFPGTILVDGDKIEKLNTKTKETISPLVY 224

Query: 263 PRFSSNGKRALISVQ----------------KDEAMDIYSVDLQSNA---TERLTNTLFI 303
           P +  +GK    SV                  DEA D+   D++ +       + +    
Sbjct: 225 PSWHPSGKYVAFSVNTTKQAFHLNDRNRVEVYDEASDVVVYDVEKHEIVTASNIFSKDAF 284

Query: 304 NISASYSPDSSQIVFESDREGK-EQLY--------------VMQSNGSDQKRISQDKEA- 347
               ++SPD   + F +       Q Y              V ++ G+    +   K   
Sbjct: 285 ETFPTFSPDGKTLYFCTAEARPIPQEYSEVKYNLCSVSFDPVTRAFGAQVDTLYNAKSGG 344

Query: 348 -SYFDPVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAP---T 396
            S   P  SP G  + +T      F+I        +        R LVE ++       +
Sbjct: 345 MSASFPRVSPDGRYLLYTLSGYGNFSIWHKDADLYMADLQTGTSRPLVEVNSDDVESYHS 404

Query: 397 WSPSGRSLIFSRKK--DGDTGSKLYSIDLNGR 426
           WS + R  +FS ++     T   +  +D +G+
Sbjct: 405 WSSNSRWFVFSSRRIDGLYTRPYIAYVDEDGK 436


>gi|265765475|ref|ZP_06093750.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263254859|gb|EEZ26293.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 492

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 45/211 (21%)

Query: 263 PRFSSNGKRALISVQK-------DEAMDIYSVDLQS-------NATERLTN----TLFIN 304
           P +  +G+    SV K            I   D  S        +   LT     T    
Sbjct: 229 PYWHPSGEYIAYSVNKTNQAFHLGGKKPIEVFDQASDVVVYHPRSHRILTTPLLSTASFE 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQS------------NGSDQKRISQDKEA----- 347
              ++SPD   + F S  + +  +                 +G+   RI     A     
Sbjct: 289 TFPAFSPDGRTLYFCSAEQKEMPVRYKDVKYSLCSIAFHPEDGTFGDRIDTLISARTLDK 348

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAI-------GVMKKDGSQERLLVEDSNLQAPT---W 397
           S   P  S  G  + FT      F+I        ++       R L E ++    +   W
Sbjct: 349 SISFPKPSFDGKYLMFTLSDYGNFSIWHKEADLWLLDLKTGAYRNLEEVNSDDTESYHNW 408

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           S +    +FS ++     ++LY   ++G+  
Sbjct: 409 SSNSHWFVFSSRRGDGLYTRLYISSVDGQGR 439



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 27/157 (17%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGNFRS 258
           S       P FSP+ + + + + + +++   Y                     RI    S
Sbjct: 283 STASFETFPAFSPDGRTLYFCSAEQKEMPVRYKDVKYSLCSIAFHPEDGTFGDRIDTLIS 342

Query: 259 ------MILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLFINI 305
                  I  P+ S +GK  + ++             D++ +DL++ A   L      + 
Sbjct: 343 ARTLDKSISFPKPSFDGKYLMFTLSDYGNFSIWHKEADLWLLDLKTGAYRNLEEVNSDDT 402

Query: 306 S--ASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQ 338
               ++S +S   VF S R      +LY+   +G  +
Sbjct: 403 ESYHNWSSNSHWFVFSSRRGDGLYTRLYISSVDGQGR 439


>gi|255012582|ref|ZP_05284708.1| hypothetical protein B2_01644 [Bacteroides sp. 2_1_7]
          Length = 488

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 103/337 (30%), Gaps = 68/337 (20%)

Query: 141 GKKFFSSPASWRKIAHTI---SDDIYQSITGEKGDFNSRI-LFVSESVVSGIIKNSLC-- 194
           G +F+   + WRK+       +  +      ++        LFV+   +   +   L   
Sbjct: 80  GGQFYLPASDWRKLLKRATGKAIQVKLYAKDKEWLAYPEFSLFVAPEPMDSYLAYRLIEP 139

Query: 195 ---VMDRDGANIRYLTPSRDQILFEPRFSP------------NQQKVAYATYDDEDILRV 239
              + ++ G   R L   +   + E ++S             N  K+ +   D      +
Sbjct: 140 GYELWNQMGIYQRNLEDYKQSPIMENKYSGQNCMNCHSFCMQNPDKMLFHMRDKYSGTYL 199

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------DEAMD 283
            +   +I++   +     S ++ P +  +GK    SV +                D   D
Sbjct: 200 -IDGDKIEKLNTKTDQTISPLVYPSWHPSGKYVAFSVNQTSQSFHANDKNRVEVFDSQSD 258

Query: 284 IYSVDLQSNA---TERLTNTLFINISASYSPDSSQIVFESDREGK-EQLY---------- 329
           +   D + +    T  +          ++SPD   + F S         Y          
Sbjct: 259 VVVYDTEKHEIISTPSIRTAKAFETFPTFSPDGKTLYFCSAEARSMPHEYSEVKYNLCSI 318

Query: 330 ----VMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---- 379
               V +S GS    +    +   S   P  SP G  + +T      F+I     D    
Sbjct: 319 AFDPVTRSFGSRIDTLYNAGKDGKSASFPRVSPDGKFLLYTLSGYGNFSIWHKDADLYLL 378

Query: 380 ------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
                     +           +WS + R ++FS ++
Sbjct: 379 DIASGISHSLQNANSTDTESYHSWSSNSRWIVFSSRR 415



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 64/193 (33%), Gaps = 33/193 (17%)

Query: 195 VMDRDGANIRYLTPSRDQIL----FEPRFSPNQQKVAYATYDDEDILRVY---------- 240
           V+  D      ++    +        P FSP+ + + + + +   +   Y          
Sbjct: 259 VVVYDTEKHEIISTPSIRTAKAFETFPTFSPDGKTLYFCSAEARSMPHEYSEVKYNLCSI 318

Query: 241 LMDTRIDRAPKRI------GNFRSMILAPRFSSNGKRALISVQKDEA-------MDIYSV 287
             D        RI      G        PR S +GK  L ++             D+Y +
Sbjct: 319 AFDPVTRSFGSRIDTLYNAGKDGKSASFPRVSPDGKFLLYTLSGYGNFSIWHKDADLYLL 378

Query: 288 DLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDR-EG---KEQLYVMQSNGSDQKRI 341
           D+ S  +  L N    +     S+S +S  IVF S R +G   +     +   G+  K  
Sbjct: 379 DIASGISHSLQNANSTDTESYHSWSSNSRWIVFSSRRIDGLYTRPYFAYIDEEGNASKPF 438

Query: 342 SQDKEASYFDPVW 354
              ++ + +   +
Sbjct: 439 LLPQKDTDYYHRF 451


>gi|197121253|ref|YP_002133204.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Anaeromyxobacter sp. K]
 gi|196171102|gb|ACG72075.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Anaeromyxobacter sp. K]
          Length = 651

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 81/211 (38%), Gaps = 10/211 (4%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +   T       +++L+   +    +++      +    F      +L+ +Q  
Sbjct: 61  SPDGRAML-VTTRFGSTAQLHLVRAPLG-MREQLTFGDEPVSDAAFLPGRPESLLYLQDQ 118

Query: 280 EA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKE-QLYVMQSN 334
                  +Y +D ++  +E LT+    +     SPD  ++ +  + R GK+  +YV +++
Sbjct: 119 GGGEFFQLYRLDRRTGRSELLTDGRSRHSDLVVSPDGRRLAYSGTGRNGKDADVYVAEAD 178

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQER-LLVEDSNL 392
                R   + E S+    +S  G  +   ++       + ++         LL    ++
Sbjct: 179 RPGAARRVVEAEGSWSPLDFSRDGRRLLVRRYRAASDADLELVDLATGARTPLLAGKGSV 238

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               +S  GR   ++    G   + L  +DL
Sbjct: 239 GGAAFSADGRH-AYAITDRGAGYAALVRVDL 268



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 10/182 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD-SSQIVFESDRE 323
            S +G+  L++ +      ++ V       E+LT        A++ P     +++  D+ 
Sbjct: 60  VSPDGRAMLVTTRFGSTAQLHLVRAPLGMREQLTFGDEPVSDAAFLPGRPESLLYLQDQG 119

Query: 324 GKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKD 379
           G E  QLY +       + ++ D  + + D V SP G  +A+  T  +G+   + V + D
Sbjct: 120 GGEFFQLYRLDRRTGRSELLT-DGRSRHSDLVVSPDGRRLAYSGTGRNGKDADVYVAEAD 178

Query: 380 G-SQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAY 436
                R +VE     +P  +S  GR L+  R +   + + L  +DL  G    L+     
Sbjct: 179 RPGAARRVVEAEGSWSPLDFSRDGRRLLVRRYRAA-SDADLELVDLATGARTPLLAGKGS 237

Query: 437 AS 438
             
Sbjct: 238 VG 239



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 86/283 (30%), Gaps = 23/283 (8%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R+ +             +   DR GA  R +         +  FS + +++    Y    
Sbjct: 157 RLAYSGTGRNGKDADVYVAEADRPGAARRVVEAEGSWSPLD--FSRDGRRLLVRRYRAAS 214

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-LISVQKDEAMDIYSVDLQS--N 292
              + L+D         +   +  +    FS++G+ A  I+ +      +  VDL     
Sbjct: 215 DADLELVDLATGARTPLLA-GKGSVGGAAFSADGRHAYAITDRGAGYAALVRVDLGHPEA 273

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           A   +   +  ++          + F ++ +G   L+V+       + ++          
Sbjct: 274 APRPVAPGVAWDVEQVVVARDGTVAFTANADGVSLLHVVDPRTGRLRGVALPGRGVATLR 333

Query: 353 VWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLV-------EDSNLQAPTWSPSGRSL 404
             S + DL+A    S    +    ++  G +            + +    P        +
Sbjct: 334 FPSGRSDLLAVGLVSATSPWDAWTVELRGGKAVRWTRSEVGGLDPAGFVEP------ELV 387

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
            +      +  + LY     GR   ++N    P     P +  
Sbjct: 388 RYPSAGGAEVPALLYRPRGGGRVPVVVNWHGGPEGQHRPAFSP 430


>gi|150010158|ref|YP_001304901.1| hypothetical protein BDI_3581 [Parabacteroides distasonis ATCC
           8503]
 gi|298374526|ref|ZP_06984484.1| cytochrome c binding protein [Bacteroides sp. 3_1_19]
 gi|301308206|ref|ZP_07214160.1| putative Cytochrome c binding protein [Bacteroides sp. 20_3]
 gi|149938582|gb|ABR45279.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
 gi|298268894|gb|EFI10549.1| cytochrome c binding protein [Bacteroides sp. 3_1_19]
 gi|300833676|gb|EFK64292.1| putative Cytochrome c binding protein [Bacteroides sp. 20_3]
          Length = 488

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 52/337 (15%), Positives = 103/337 (30%), Gaps = 68/337 (20%)

Query: 141 GKKFFSSPASWRKIAHTI---SDDIYQSITGEKGDFNSRI-LFVSESVVSGIIKNSLC-- 194
           G +F+   + WRK+       +  +      ++        LFV+   +   +   L   
Sbjct: 80  GGQFYLPASDWRKLLKRATGKAIQVKLYAKDKEWLAYPEFSLFVAPEPMDSYLAYRLIEP 139

Query: 195 ---VMDRDGANIRYLTPSRDQILFEPRFSP------------NQQKVAYATYDDEDILRV 239
              + ++ G   R L   +   + E ++S             N  K+ +   D      +
Sbjct: 140 GYELWNQMGIYQRNLEDYKQSPIMENKYSGQNCMNCHSFCMQNPDKMLFHMRDKYSGTYL 199

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------DEAMD 283
            +   +I++   +     S ++ P +  +GK    SV +                D   D
Sbjct: 200 -IDGDKIEKLNTKTDQTISPLVYPSWHPSGKYVAFSVNQTSQSFHANDKNRVEVFDSQSD 258

Query: 284 IYSVDLQSNA---TERLTNTLFINISASYSPDSSQIVFESDREGK-EQLY---------- 329
           +   D + +    T  +          ++SPD   + F S         Y          
Sbjct: 259 VVVYDTEKHEIISTPSIRTAKAFETFPTFSPDGKTLYFCSAEARSMPHEYSEVKYNLCSI 318

Query: 330 ----VMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---- 379
               V +S GS    +    +   S   P  SP G  + +T      F+I     D    
Sbjct: 319 AFDPVTRSFGSRIDTLYNAGKDGKSASFPRVSPDGKFLLYTLSGYGNFSIWHKDADLYLL 378

Query: 380 ------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
                     +           +WS + R ++FS ++
Sbjct: 379 DIASGISHSLQNANSTDTESYHSWSSNSRWIVFSSRR 415



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 64/193 (33%), Gaps = 33/193 (17%)

Query: 195 VMDRDGANIRYLTPSRDQIL----FEPRFSPNQQKVAYATYDDEDILRVY---------- 240
           V+  D      ++    +        P FSP+ + + + + +   +   Y          
Sbjct: 259 VVVYDTEKHEIISTPSIRTAKAFETFPTFSPDGKTLYFCSAEARSMPHEYSEVKYNLCSI 318

Query: 241 LMDTRIDRAPKRI------GNFRSMILAPRFSSNGKRALISVQKDEA-------MDIYSV 287
             D        RI      G        PR S +GK  L ++             D+Y +
Sbjct: 319 AFDPVTRSFGSRIDTLYNAGKDGKSASFPRVSPDGKFLLYTLSGYGNFSIWHKDADLYLL 378

Query: 288 DLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDR-EG---KEQLYVMQSNGSDQKRI 341
           D+ S  +  L N    +     S+S +S  IVF S R +G   +     +   G+  K  
Sbjct: 379 DIASGISHSLQNANSTDTESYHSWSSNSRWIVFSSRRIDGLYTRPYFAYIDEEGNASKPF 438

Query: 342 SQDKEASYFDPVW 354
              ++ + +   +
Sbjct: 439 LLPQKDTDYYHRF 451


>gi|238750281|ref|ZP_04611783.1| hypothetical protein yrohd0001_12160 [Yersinia rohdei ATCC 43380]
 gi|238711514|gb|EEQ03730.1| hypothetical protein yrohd0001_12160 [Yersinia rohdei ATCC 43380]
          Length = 428

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 20/160 (12%)

Query: 279 DEAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQL 328
           +                R+T T       +  +   +   SPD S I    +D  G  QL
Sbjct: 274 EGTKTTLPAPPMGVTQRRITFTAGRRFPGLATTPRHWLRSSPDGSAIACLMADDNGVVQL 333

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++  NG + ++++  +        W PQG  +AF   +    ++   +    Q + L  
Sbjct: 334 WLVSPNGGEPRQLTATESGIQSAFSWHPQGQSLAFISDN----SVMQCEVATGQLQRLTA 389

Query: 389 DS----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            S       A  +SP G  + F R+  G T  ++++++ +
Sbjct: 390 RSLQAPLADAVVFSPDGSKIAFMREIAGFT--QIFTVNTS 427



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 49/134 (36%), Gaps = 11/134 (8%)

Query: 208 PSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                +   PR     SP+   +A    DD  +++++L+        +       +  A 
Sbjct: 298 RRFPGLATTPRHWLRSSPDGSAIACLMADDNGVVQLWLVSPNGGEPRQLTATESGIQSAF 357

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL---FINISASYSPDSSQIVFES 320
            +   G+             +   ++ +   +RLT       +  +  +SPD S+I F  
Sbjct: 358 SWHPQGQSLAFISDNS----VMQCEVATGQLQRLTARSLQAPLADAVVFSPDGSKIAFMR 413

Query: 321 DREGKEQLYVMQSN 334
           +  G  Q++ + ++
Sbjct: 414 EIAGFTQIFTVNTS 427



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 39/99 (39%), Gaps = 3/99 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++  +G   R LT +   I     + P  Q +A+ +  D  +++  +   ++ R   
Sbjct: 332 QLWLVSPNGGEPRQLTATESGIQSAFSWHPQGQSLAFIS--DNSVMQCEVATGQLQRLTA 389

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           R      +  A  FS +G +     +      I++V+  
Sbjct: 390 RSLQAP-LADAVVFSPDGSKIAFMREIAGFTQIFTVNTS 427


>gi|218259492|ref|ZP_03475215.1| hypothetical protein PRABACTJOHN_00873 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225085|gb|EEC97735.1| hypothetical protein PRABACTJOHN_00873 [Parabacteroides johnsonii
           DSM 18315]
          Length = 498

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 84/258 (32%), Gaps = 47/258 (18%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---- 283
           +          +   +  +     ++G+ +     P +  +GK  + S            
Sbjct: 210 FHARTTPGGTIIIKNNQPVKVQLSQLGSSKEGTY-PHWHPSGKYIIFSTNATRQSFYSRN 268

Query: 284 ---IYSVDLQSN-------ATERLTNTLFI-----NISASYSPDSSQIVFESD------- 321
              I   DL+S+           +T+  F          +++PD  ++ + +        
Sbjct: 269 PNLIEVYDLESDLILYDPVRNTVITDPRFNSPESFETFPAWAPDGKRLYYCTAPAKQLPK 328

Query: 322 --REGKEQLYVMQSN------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             RE K  +  +  +      G     I      S   P  SP    + FT+     F I
Sbjct: 329 RLREVKYSICSVSFDPDSGSFGETIDTIYTAHNKSASFPRISPDNQYLLFTESDYATFPI 388

Query: 374 GVMKKDGSQERL---------LVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSK--LYSI 421
              + D     L         ++   ++++  +WS +G+ +IFS ++     ++  +  +
Sbjct: 389 WHKEADLKMISLQDSASVNTDILNSPDVESYHSWSSNGKWIIFSSRRLDGLYTRFFIAHL 448

Query: 422 DLNGRNETLINTPAYASD 439
           + NG+       P    D
Sbjct: 449 NKNGKFSKPFLLPQKDPD 466



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 46/139 (33%), Gaps = 23/139 (16%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRV----------YLMDTRIDRAPKRI--- 253
             S +     P ++P+ +++ Y T   + + +              D       + I   
Sbjct: 297 FNSPESFETFPAWAPDGKRLYYCTAPAKQLPKRLREVKYSICSVSFDPDSGSFGETIDTI 356

Query: 254 -GNFRSMILAPRFSSNGKRALISVQKDEAMDIY-------SVDLQSNATER--LTNTLFI 303
                     PR S + +  L +        I+        + LQ +A+    + N+  +
Sbjct: 357 YTAHNKSASFPRISPDNQYLLFTESDYATFPIWHKEADLKMISLQDSASVNTDILNSPDV 416

Query: 304 NISASYSPDSSQIVFESDR 322
               S+S +   I+F S R
Sbjct: 417 ESYHSWSSNGKWIIFSSRR 435



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 37/102 (36%), Gaps = 13/102 (12%)

Query: 190 KNSLCVMDRD------GANIRYLTPSRDQILFEPRFSPNQQKVAYATYD-------DEDI 236
           K S+C +  D      G  I  +  + ++    PR SP+ Q + +   D        ++ 
Sbjct: 334 KYSICSVSFDPDSGSFGETIDTIYTAHNKSASFPRISPDNQYLLFTESDYATFPIWHKEA 393

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
               +           I N   +     +SSNGK  + S ++
Sbjct: 394 DLKMISLQDSASVNTDILNSPDVESYHSWSSNGKWIIFSSRR 435


>gi|73669004|ref|YP_305019.1| hypothetical protein Mbar_A1484 [Methanosarcina barkeri str.
           Fusaro]
 gi|72396166|gb|AAZ70439.1| hypothetical protein Mbar_A1484 [Methanosarcina barkeri str.
           Fusaro]
          Length = 374

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 71/173 (41%), Gaps = 15/173 (8%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G R + +   DE  +IY  DL +    ++T +  ++ S  Y    ++IV+ S+     ++
Sbjct: 76  GNRIVWTDYHDEECNIYMYDLSTKKETQITTSGDVSGSDIY---GNRIVW-SNYVYPNEV 131

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y+   + S +  IS     + +    S  GD + +     +  +I +      +E LL  
Sbjct: 132 YMYDLSTSQKSTIS---GYNSYVDSLSIYGDKVVWGDSLDDYVSIFMHDLSTKEETLLTY 188

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           D+    P     G  +++    +      +Y  D++ + +T I     A DP 
Sbjct: 189 DAYN--PAI--YGNRIVW----EDRFDDNIYMYDISTKKQTRITNGGAADDPA 233



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 64/178 (35%), Gaps = 24/178 (13%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             ++ +   +D     +Y+ D    +   RI N  +      +   G R + +   D   
Sbjct: 197 GNRIVW---EDRFDDNIYMYDISTKKQT-RITNGGAADDPAIY---GNRIVYASTHDGNT 249

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKEQLYVMQSNGSD 337
           DIY  DL +    ++T++       +     ++IV+E D           +Y+   + + 
Sbjct: 250 DIYMYDLSTKKQTQITSSPDAQTHPAIY--GNRIVWEDDGGEDDGYTNHGIYMYDISTNQ 307

Query: 338 QKRISQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           + +IS    A      +SP   G+ I +  ++ E   +      G   R   E S   
Sbjct: 308 KMKISTKGSA------YSPTIYGNNIVWEYYNNENGKLR--NLHGHYFRTKTEPSYCC 357


>gi|154490364|ref|ZP_02030625.1| hypothetical protein PARMER_00597 [Parabacteroides merdae ATCC
           43184]
 gi|154088975|gb|EDN88019.1| hypothetical protein PARMER_00597 [Parabacteroides merdae ATCC
           43184]
          Length = 475

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/318 (15%), Positives = 97/318 (30%), Gaps = 71/318 (22%)

Query: 160 DDIYQSITGEKG---------DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           D I  S   EKG            +  +F + +   G    ++ + +     ++      
Sbjct: 159 DIIISSNMNEKGCVNCHSFCNYSPTEFMFHARTSPGG----TIIIKNNQPTKVQLSQLGS 214

Query: 211 DQILFEPRFSPNQQKVAYA------TYDDEDILRVYLMDTRID------RAPKRIGNFR- 257
            +    P + P+ + + ++      ++   +   + + D   D           I + R 
Sbjct: 215 SKEGTYPHWHPSGKYIIFSTNTTRQSFYSRNPNLIEVYDLESDLVLYDLVHNTVITDPRF 274

Query: 258 ----SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
               S    P ++ +GKR          +            +RL    +   S S++PD+
Sbjct: 275 NGPASFETFPAWAPDGKRLYYCTAPARQL-----------PKRLKEIKYSICSVSFNPDN 323

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                                G     I      S   P  SP    + FT+     F I
Sbjct: 324 GSF------------------GETIDTIYTAHNKSASFPRISPDNQYLLFTESDYATFPI 365

Query: 374 G-------VMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK--LYSI 421
                   ++   GS      +L         +WS +GR +IFS ++     ++  +  +
Sbjct: 366 WHKEADLKMISLQGSAPVDTDILNSTDVESYHSWSSNGRWIIFSSRRLDGLYTRFFIAHL 425

Query: 422 DLNGRNETLINTPAYASD 439
           + NG+       P    D
Sbjct: 426 NKNGKFSKPFLLPQKDPD 443


>gi|226226472|ref|YP_002760578.1| putative gamma-glutamyltranspeptidase [Gemmatimonas aurantiaca
           T-27]
 gi|226089663|dbj|BAH38108.1| putative gamma-glutamyltranspeptidase [Gemmatimonas aurantiaca
           T-27]
          Length = 975

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 81/215 (37%), Gaps = 17/215 (7%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             L V L       A   +   +S +  P  SS G    ++ ++D  +     D     T
Sbjct: 15  SALLVPLTIGHAQSASTAVTERQSPVRRPAVSSLGT---LAFEQDGHLYFRFAD---GTT 68

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-----SDQKRISQDKEASY 349
            R++     +  AS++  S  + F SD  G   ++ +  +G         R++       
Sbjct: 69  TRVSAGTAYHRDASFT--SGALYFASDSAGHYDIWRLPLDGRDRPSGAATRLTTSSAHDV 126

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +    +I F +  G +    V + DG + RL   +   + P  S  GR +     
Sbjct: 127 SPSAGT--NGVIVFQRGLGGESRAWVREADGRERRLSTTERTERRPRMSSDGRRVALLAL 184

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              +TG K  ++ ++G  E+ ++T A   D  W G
Sbjct: 185 T--ETGRKAVALSIDGSGESTVSTDATLEDLAWGG 217



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 59/201 (29%), Gaps = 12/201 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                F S  L+ +           +  +  DG +      +R         SP+     
Sbjct: 78  HRDASFTSGALYFA---SDSAGHYDIWRLPLDGRDRPSGAATRLTTSSAHDVSPSAGTNG 134

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              +               D   +R+         PR SS+G+R  +    +      ++
Sbjct: 135 VIVFQRGLGGESRAWVREADGRERRLSTTERTERRPRMSSDGRRVALLALTETGRKAVAL 194

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +  +    ++    +   A      +  +  S R G   +YV+   GS    ++     
Sbjct: 195 SIDGSGESTVSTDATLEDLAW---GGTTQIALSTRNG---VYVVPVTGSTYLNLA---SR 245

Query: 348 SYFDPVWSPQGDLIAFTKFSG 368
           S+ D  WS  G  I   +   
Sbjct: 246 SHGDIDWSANGTTITIAEQRD 266


>gi|77747785|ref|NP_636480.2| alanyl dipeptidyl peptidase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|77761276|ref|YP_244208.2| alanyl dipeptidyl peptidase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 705

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 84/271 (30%), Gaps = 46/271 (16%)

Query: 214 LFEPRFSPNQQKVAYA-----TYDDEDILRVYLMDTRIDR--APKRIGNFRSMILAPRFS 266
           +  P  +P+   V +A     T + +    +++ + R      PKR+      + +P  S
Sbjct: 36  VSSPTLTPDGSVVVFAKRQAKTANGKAATSLWMRNLRTRDLAPPKRLTPEGWNVNSPALS 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------- 319
            +GK+      K     +Y+  L     ++LT       S   SPD  +I F        
Sbjct: 96  PDGKKVYFLSSKSGTQQLYAQPLAGGIPQQLTAFAVDLDSYKLSPDGKRIAFSAGVFQDC 155

Query: 320 -SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD  G  +  +     +    +  D+        W+       F        A  V   
Sbjct: 156 GSD-LGCTKKKLADLKNAKASGVVYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVAGA 214

Query: 379 DGSQERLLVED-----SNLQAPTWSPSGRSLIFS----------------------RKKD 411
                 L  +             WSP G S++ S                        + 
Sbjct: 215 SAISATLAGDAPSKPFGGNDDYAWSPDGASVVASVRIPQPHGPGAGKTAAQGKATGNDEA 274

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             T   LY +D  G++  +  T   A++P W
Sbjct: 275 WQTNFDLYRLDAAGKSAPVNLT---AANPAW 302



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 92/307 (29%), Gaps = 60/307 (19%)

Query: 183 SVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +G    SL + +   RD A  + LTP    +   P  SP+ +KV + +   +   + 
Sbjct: 56  KTANGKAATSLWMRNLRTRDLAPPKRLTPEGWNVN-SPALSPDGKKVYFLS--SKSGTQQ 112

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-------QKDEAMDIYSVDLQSN 292
                     P+++  F   + + + S +GKR   S                   DL++ 
Sbjct: 113 LYAQPLAGGIPQQLTAFAVDLDSYKLSPDGKRIAFSAGVFQDCGSDLGCTKKKLADLKNA 172

Query: 293 ATE-RLTNTLFINISASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDK 345
                + + LF+    +++      +F ++      +       +  +   D        
Sbjct: 173 KASGVVYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVAGASAISATLAGDAPSKPFGG 232

Query: 346 EASYFDPVWSPQGDLIAFTKFSG------------------------EKFAIGVMKKDG- 380
              Y    WSP G  +  +                              F +  +   G 
Sbjct: 233 NDDY---AWSPDGASVVASVRIPQPHGPGAGKTAAQGKATGNDEAWQTNFDLYRLDAAGK 289

Query: 381 SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPA 435
           S    L     +    P +S  G++L +   K     +    L ++DL       I    
Sbjct: 290 SAPVNLTAANPAWDAGPVFSADGKTLYYRAMKRPGFEADRFGLMAMDLASGKTREIA--- 346

Query: 436 YASDPQW 442
               P+W
Sbjct: 347 ----PKW 349



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 60/193 (31%), Gaps = 22/193 (11%)

Query: 165 SITGEKGDFNSRILFVSESVVSG---IIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFS 220
            I    G    +     ++  +         L  +D  G +    LT +       P FS
Sbjct: 250 RIPQPHGPGAGKTAAQGKATGNDEAWQTNFDLYRLDAAGKSAPVNLTAANPAWDAGPVFS 309

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF---------SSNGKR 271
            + + + Y                R       + + ++  +AP++         S +G  
Sbjct: 310 ADGKTLYYRAMKRPGF-----EADRFGLMAMDLASGKTREIAPKWDRSAGEIVLSDDGSS 364

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYV 330
              S        ++ +D+ S    ++     ++     +   + + F  +  +  +Q+ V
Sbjct: 365 LYTSADDLGEHPLFKIDIASGDATKVVGEGSVHA-PVLA--GTTLAFTRNSLKSGDQIVV 421

Query: 331 MQSNGSDQKRISQ 343
               G   + I+Q
Sbjct: 422 SDVQGQGLRAITQ 434


>gi|162451320|ref|YP_001613687.1| hypothetical protein sce3048 [Sorangium cellulosum 'So ce 56']
 gi|161161902|emb|CAN93207.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 601

 Score = 72.4 bits (176), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 83/232 (35%), Gaps = 16/232 (6%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRA 249
            ++ V+DR G + R       + + +P+ +P  + VA     D D    + ++DT   + 
Sbjct: 356 KTITVVDRSGQSKRVRIDPEHRFV-DPKLAPGGRFVAVYDRPDADAQADLMVLDTDGGKE 414

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQS---NATERLTNTLF 302
              +      +    +  +  R          + +A  +  VD+     +          
Sbjct: 415 VFGLHTENQSLGGFAW-LDETRLAFVYVPDASEGDAPHLAVVDVGKQPLSIERPFRAKPG 473

Query: 303 IN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +  + + S D ++IV   D    ++  +   + +  +R           P +SP    +
Sbjct: 474 EDLRNPAASSDGTKIVCVVD---GDEPGIAVIDTATWRRKVYAAPGGASWPAFSPDAARV 530

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIF-SRKKD 411
           AF         I V+     + + L   S  +  P +S  G+ ++F  R +D
Sbjct: 531 AFETRGAGGTDIAVLALSTGEIKKLTVGSATERVPRFSADGKRVLFEVRYRD 582



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 57/325 (17%), Positives = 113/325 (34%), Gaps = 49/325 (15%)

Query: 67  EVVSKDLQRSDVF-----NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
            V S+DL RS+         + + +     T+P ++     W   G  V       ++G 
Sbjct: 290 SVRSRDLARSEALETVEWRPLDRPAVPT--TDPAAVK--PMWR--GYHVYSYPSSQRDGD 343

Query: 122 DRLRVE--------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
               VE          + D   +     K+    P       H   D         K   
Sbjct: 344 RVALVEDFFGWAKTITVVDRSGQ----SKRVRIDPE------HRFVD--------PKLAP 385

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-D 232
             R + V         +  L V+D DG    +   + +Q L    +  ++ ++A+    D
Sbjct: 386 GGRFVAV-YDRPDADAQADLMVLDTDGGKEVFGLHTENQSLGGFAW-LDETRLAFVYVPD 443

Query: 233 DEDILRVYLMDTRIDRAPKRI-----GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             +    +L    + + P  I           +  P  SS+G + +  V  DE   I  +
Sbjct: 444 ASEGDAPHLAVVDVGKQPLSIERPFRAKPGEDLRNPAASSDGTKIVCVVDGDE-PGIAVI 502

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D  +    ++          ++SPD++++ FE+   G   + V+  +  + K+++    A
Sbjct: 503 DTAT-WRRKVYAAPGGASWPAFSPDAARVAFETRGAGGTDIAVLALSTGEIKKLT-VGSA 560

Query: 348 SYFDPVWSPQGDLIAF-TKFSGEKF 371
           +   P +S  G  + F  ++    F
Sbjct: 561 TERVPRFSADGKRVLFEVRYRDPVF 585



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 74/242 (30%), Gaps = 12/242 (4%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +   P    +  +VA           + ++D        RI      +  P+ +  G+ 
Sbjct: 331 HVYSYPSSQRDGDRVALVEDFFGWAKTITVVDRSGQSKRVRIDPEHRFV-DPKLAPGGRF 389

Query: 272 ALISVQKDEAM--DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----SDREGK 325
             +  + D     D+  +D          +T   ++      D +++ F     +     
Sbjct: 390 VAVYDRPDADAQADLMVLDTDGGKEVFGLHTENQSLGGFAWLDETRLAFVYVPDASEGDA 449

Query: 326 EQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             L V+       S ++           +P  S  G  I      G++  I V+     +
Sbjct: 450 PHLAVVDVGKQPLSIERPFRAKPGEDLRNPAASSDGTKIV-CVVDGDEPGIAVIDTATWR 508

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            ++         P +SP    + F  +  G T   + ++   G  + L    A    P++
Sbjct: 509 RKVYAAPGGASWPAFSPDAARVAFETRGAGGTDIAVLALS-TGEIKKLTVGSATERVPRF 567

Query: 443 VG 444
             
Sbjct: 568 SA 569


>gi|285016943|ref|YP_003374654.1| dipeptidyl-peptidase iv protein [Xanthomonas albilineans GPE PC73]
 gi|283472161|emb|CBA14668.1| putative dipeptidyl-peptidase iv protein [Xanthomonas albilineans]
          Length = 783

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 78/209 (37%), Gaps = 17/209 (8%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATE---RLTNTLF 302
           RA +   +         +S +G+   + ++  +  D +   VDL     +   RLT+  +
Sbjct: 321 RAIQVETDGDGSGATMHWSEDGRNVAVMLRAVDNKDRWIASVDLDKAVLQPRHRLTDPAW 380

Query: 303 INISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           IN + +   + PD+  +   S++ G   LY    +G+D+ R           PV S  G 
Sbjct: 381 INWNFNDFGWMPDNQTLWLLSEQSGDAHLYT--QHGTDKPRQRTAGNWEVSAPVMSADGQ 438

Query: 360 LIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              F   +     + +  +         L     ++    SP G+ L+           +
Sbjct: 439 GFLFLCNRKWPGDYEVCKLDLRDDSVVELTSLEGVEDFALSPDGQHLL-VHYSGAYLPPQ 497

Query: 418 LYSIDLNGRNETLIN---TPAYASDPQWV 443
           L  +  +G +  ++    + A+ + P W+
Sbjct: 498 LAVLPASGGSARVLTDTRSAAFKARP-WI 525



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 71/193 (36%), Gaps = 13/193 (6%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGA--NIRYLTPSRDQILFEPR---FSPNQQ 224
               + R + V    V    +  +  +D D A    R+       I +      + P+ Q
Sbjct: 337 HWSEDGRNVAVMLRAVDNKDRW-IASVDLDKAVLQPRHRLTDPAWINWNFNDFGWMPDNQ 395

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAM 282
            +   +    D    +L        P++       + AP  S++G+  L    +      
Sbjct: 396 TLWLLSEQSGDA---HLYTQHGTDKPRQRTAGNWEVSAPVMSADGQGFLFLCNRKWPGDY 452

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRI 341
           ++  +DL+ ++   LT+   +   A  SPD   ++   S      QL V+ ++G   + +
Sbjct: 453 EVCKLDLRDDSVVELTSLEGVEDFA-LSPDGQHLLVHYSGAYLPPQLAVLPASGGSARVL 511

Query: 342 SQDKEASYFDPVW 354
           +  + A++    W
Sbjct: 512 TDTRSAAFKARPW 524



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 76/225 (33%), Gaps = 40/225 (17%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSN 268
             + +  ++ + ++V Y    +   +R            +RI + +   L    P + + 
Sbjct: 33  PPVEDAWWAWDGRQVQYKLKRNGSPVRDTYRQGIDGSTAQRIEDTQRSTLDAANPVYDAA 92

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +R L     D    ++  DL+S A  +LT +        +S D   +     R G +  
Sbjct: 93  RRRMLFVRNGD----VFLRDLRSGALTQLTRSNQAAARPQFSTDGGALW----RVGND-W 143

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-- 386
           Y    +    +      E    DP  +P+ D +     + +   +  + +D +Q  LL  
Sbjct: 144 YRWNPDSGIAQAALLKAE---RDPDTAPKLDTL----RAQQLHTLETLARDRAQRDLLRQ 196

Query: 387 -------VEDSNLQAPTW------------SPSGRSLIFSRKKDG 412
                   + S   AP +            SP GR L+      G
Sbjct: 197 QEQAWRRADGSRAPAPVYLGEDVVIDDSALSPDGRHLLVVTHAKG 241



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 78/255 (30%), Gaps = 39/255 (15%)

Query: 198 RDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
            DG+     +    D ++ +   SP+ + +   T+           + R  + PK +   
Sbjct: 204 ADGSRAPAPVYLGEDVVIDDSALSPDGRHLLVVTHAKG------ADEGREGKMPKYVTES 257

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISASYSPDSS 314
                         R  +      A +++ VD+ + +  +L       I+          
Sbjct: 258 GYEEFQEV------RTRVGRNPPLAQNLWLVDIAAGSARKLDFAVLPGIHNDP------- 304

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFA 372
                + R+  +Q      +G    ++  D + S     WS  G  +A        +   
Sbjct: 305 ---LAALRKAAKQ---EPLHGPRAIQVETDGDGSGATMHWSEDGRNVAVMLRAVDNKDRW 358

Query: 373 IGVMKKDGSQER---LLVED----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           I  +  D +  +    L +      N     W P  ++L    ++ GD  + LY+     
Sbjct: 359 IASVDLDKAVLQPRHRLTDPAWINWNFNDFGWMPDNQTLWLLSEQSGD--AHLYTQHGTD 416

Query: 426 RNETLINTPAYASDP 440
           +           S P
Sbjct: 417 KPRQRTAGNWEVSAP 431


>gi|14601657|ref|NP_148198.1| acylamino-acid-releasing enzyme [Aeropyrum pernix K1]
 gi|5105522|dbj|BAA80835.1| acylamino-acid-releasing enzyme [Aeropyrum pernix K1]
          Length = 659

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 79/258 (30%), Gaps = 43/258 (16%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR-IDRAPKRIGNFRSMILAPRFSSN 268
           R   +  P  SP   KVAY     ++    Y       +    R          P +S +
Sbjct: 15  RLTFVSNPSVSPEGDKVAYLATKADEKENTYRSGIWLAEEDSYRPLTGGPYDRCPAWSPD 74

Query: 269 GKRALISVQKDEAMD----IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---- 320
           G+    S   +        I  V  +    + L  ++    S  +S   S I + S    
Sbjct: 75  GEIIAFSRTVNSNQRKRHYIAIVSPKGGEPQVLHESVSPATSIKWSSQGSMIGYLSRKPT 134

Query: 321 DREGKE---------------------------QLYVMQSNGSDQKRISQDKEASYFDPV 353
            RE K                             L V+   G +          +  D  
Sbjct: 135 GREWKPYSERDVLEIDRIPVWFDSEGWVFDRYWGLTVISYPGGEVLLEKGGVNYNIVDFD 194

Query: 354 WSPQGDLIAFTKFSGEK----FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS-- 407
           ++P  + I +   +  K      + +      +E+ L+E   + A  + P GR +     
Sbjct: 195 FAPDDNTIVYAVSTDMKKPFIHKLVLWDLASGREKTLIEGLTIAAVAFDPRGRYIAVKAN 254

Query: 408 -RKKDGDTGSKLYSIDLN 424
            RK+   +  K++  DLN
Sbjct: 255 DRKRGLFSHYKIFVYDLN 272



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 50/120 (41%), Gaps = 18/120 (15%)

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQERLLVEDSNLQAP 395
           R++        +P  SP+GD +A+     ++    +  G+   +    R L      + P
Sbjct: 15  RLTF-----VSNPSVSPEGDKVAYLATKADEKENTYRSGIWLAEEDSYRPLTGGPYDRCP 69

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLY--SIDLNGRNETLIN---TPA----YASDPQWVGFM 446
            WSP G  + FSR  + +   + Y   +   G    +++   +PA    ++S    +G++
Sbjct: 70  AWSPDGEIIAFSRTVNSNQRKRHYIAIVSPKGGEPQVLHESVSPATSIKWSSQGSMIGYL 129



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 73/225 (32%), Gaps = 24/225 (10%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V+   G  +       +  + +  F+P+   + YA   D     ++ +      + + 
Sbjct: 169 LTVISYPGGEVLLEKGGVNYNIVDFDFAPDDNTIVYAVSTDMKKPFIHKLVLWDLASGRE 228

Query: 253 IGNFRSMILAP-RFSSNGKRALISVQKDEA-----MDIYSVDLQSNATERLTNTLFINI- 305
                 + +A   F   G+   +     +        I+  DL S     LT  L +N  
Sbjct: 229 KTLIEGLTIAAVAFDPRGRYIAVKANDRKRGLFSHYKIFVYDLNSEEFVCLTCDLDLNTL 288

Query: 306 --------SAS-----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                     S     Y  D+  + +     G+  +   +  G + + +     A+  D 
Sbjct: 289 NTVNSDARGPSCLRGMYWDDNGHLYYGVHNAGRMVVMKSRPLG-EAEAVLDPSSATVDDF 347

Query: 353 VWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVEDSNLQAPT 396
             S  GD IA+ K        I + + D   E  L + +   A +
Sbjct: 348 SISRGGDTIAYVKMGPTSPPDIYIYRDD--NEYRLTDHNAWFAES 390


>gi|226227886|ref|YP_002761992.1| putative dipeptidyl peptidase [Gemmatimonas aurantiaca T-27]
 gi|226091077|dbj|BAH39522.1| putative dipeptidyl peptidase [Gemmatimonas aurantiaca T-27]
          Length = 801

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 61/190 (32%), Gaps = 13/190 (6%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERL--TNTLFINISAS- 308
           +    S +    + ++G  ALI+    +    Y   +  +     +   N          
Sbjct: 337 LERPASQVRVASWKADGSAALITSSTPDFKWRYLTSVGDTGQLRVVHALNDTAYVGGPCS 396

Query: 309 ----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P+  ++ + S+  G   LY    +GSD + ++  K         S  G      
Sbjct: 397 NCMGFLPNG-RVWYGSEVSGYAHLYTANVDGSDTQPLTSGK-WEVERAELSDDGTWFLLH 454

Query: 365 KFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                 F      M   G     +  +    + T SP G+          +   +LY ++
Sbjct: 455 TSEESPFVRHAYRMAATGGARTKITREHGGHSVTLSPDGKRFA-DVYSASNLPPELYVVN 513

Query: 423 LNGRNETLIN 432
            +G N+T + 
Sbjct: 514 ADGSNQTRLT 523



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 65/182 (35%), Gaps = 17/182 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNF 256
           ANI        +      +S + Q + +          + +R Y + T     P+ + + 
Sbjct: 24  ANIMRGPEHTGREPQGAAWSADGQWLYFQWTPAGAAWNEPMRPYRVRTVAGSKPELVSDA 83

Query: 257 RSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
               ++        S +  R   SV+ D    +Y + L++ A  RLT T        ++ 
Sbjct: 84  HMDSVSAVLADGVLSRDRTRRATSVRGD----LYLITLRTGAVRRLTQTAVAETDPRFTA 139

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   ++F+  R+G    YV+     D ++++  +          P G      +   E F
Sbjct: 140 DDRSLIFQ--RDGNA--YVLDLTNGDLRQLTDVRGGPAPRDPERPTGMRGEIERQQRELF 195

Query: 372 AI 373
            +
Sbjct: 196 DV 197



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 60/180 (33%), Gaps = 14/180 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAPR-----FSSNGK 270
            +  +    A  T    D    YL         + +   N  + +  P      F  NG 
Sbjct: 348 SWKADGS-AALITSSTPDFKWRYLTSVGDTGQLRVVHALNDTAYVGGPCSNCMGFLPNG- 405

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--EQL 328
           R     +      +Y+ ++  + T+ LT+  +    A  S D +  +  +  E       
Sbjct: 406 RVWYGSEVSGYAHLYTANVDGSDTQPLTSGKWEVERAELSDDGTWFLLHTSEESPFVRHA 465

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLV 387
           Y M + G  + +I+++          SP G   A     S     + V+  DGS +  L 
Sbjct: 466 YRMAATGGARTKITREHGG--HSVTLSPDGKRFADVYSASNLPPELYVVNADGSNQTRLT 523



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 7/139 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F PN +   +   +      +Y  +       + + + +  +     S +G   L+   +
Sbjct: 401 FLPNGR--VWYGSEVSGYAHLYTANVD-GSDTQPLTSGKWEVERAELSDDGTWFLLHTSE 457

Query: 279 D--EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-FESDREGKEQLYVMQSNG 335
           +       Y +     A  ++T       S + SPD  +     S      +LYV+ ++G
Sbjct: 458 ESPFVRHAYRMAATGGARTKITREHG-GHSVTLSPDGKRFADVYSASNLPPELYVVNADG 516

Query: 336 SDQKRISQDKEASYFDPVW 354
           S+Q R++     ++    W
Sbjct: 517 SNQTRLTVSTSEAFRSRTW 535



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 54/147 (36%), Gaps = 21/147 (14%)

Query: 306 SASYSPDSSQIVFESDREGK-----EQLYVMQSNGSDQKRISQDK-----EASYFDPVWS 355
            A++S D   + F+    G       + Y +++    +  +  D       A   D V S
Sbjct: 39  GAAWSADGQWLYFQWTPAGAAWNEPMRPYRVRTVAGSKPELVSDAHMDSVSAVLADGVLS 98

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT 414
                 A T   G+   + ++       R L + +  +  P ++   RSLIF  ++DG+ 
Sbjct: 99  RDRTRRA-TSVRGD---LYLITLRTGAVRRLTQTAVAETDPRFTADDRSLIF--QRDGNA 152

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQ 441
               Y +DL   +   +        P+
Sbjct: 153 ----YVLDLTNGDLRQLTDVRGGPAPR 175


>gi|311030234|ref|ZP_07708324.1| acylamino-acid-releasing enzyme [Bacillus sp. m3-13]
          Length = 592

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 58/132 (43%), Gaps = 4/132 (3%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S + K+ + S       +++++DL +     LT          Y P+   I+   D++
Sbjct: 22  TLSPDEKQLVYSTNLTGHYNVWAMDLPNQYPYPLTFNNQSCHGLKYDPNGKYILASFDKD 81

Query: 324 GKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI--GVMKKD 379
           G E  QLY + S G + + +  D E  + +P +S  G  I +T     +  +       +
Sbjct: 82  GNELAQLYALPSRGGELQDVRVDNEHRHMNPSFSKDGQRIYYTSTKDNQTYLNCFCYDLE 141

Query: 380 GSQERLLVEDSN 391
             +E+LLVE ++
Sbjct: 142 TKEEKLLVEGTD 153



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 5/135 (3%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTK 365
           + SPD  Q+V+ ++  G   ++ M         ++ +   S     + P G  I   F K
Sbjct: 22  TLSPDEKQLVYSTNLTGHYNVWAMDLPNQYPYPLTFN-NQSCHGLKYDPNGKYILASFDK 80

Query: 366 FSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              E   +  +   G + +   +  +     P++S  G+ + ++  KD  T    +  DL
Sbjct: 81  DGNELAQLYALPSRGGELQDVRVDNEHRHMNPSFSKDGQRIYYTSTKDNQTYLNCFCYDL 140

Query: 424 NGRNETLINTPAYAS 438
             + E L+     AS
Sbjct: 141 ETKEEKLLVEGTDAS 155



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 77/245 (31%), Gaps = 21/245 (8%)

Query: 195 VMDRDGANI-RYLTPSRDQILFEPRFSPNQQKV-AYATYDDEDILRVYLMDTRIDRAPKR 252
           V   D  N   Y     +Q     ++ PN + + A    D  ++ ++Y + +R       
Sbjct: 42  VWAMDLPNQYPYPLTFNNQSCHGLKYDPNGKYILASFDKDGNELAQLYALPSRGGELQDV 101

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAM--DIYSVDLQSNATERLTNTLFINISA-SY 309
             +     + P FS +G+R   +  KD     + +  DL++   + L      +    + 
Sbjct: 102 RVDNEHRHMNPSFSKDGQRIYYTSTKDNQTYLNCFCYDLETKEEKLLVEGTDASTYLIAV 161

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFS 367
           S D    +                 G    +++ + ++ +        G    +  T + 
Sbjct: 162 SEDEESFI-TLRHYANTHTQAFLHQGETTTKLTPETDSQHTVDSAIFTGSNSVYLVTDYE 220

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            +   +     +  +   + +                 F+      +G+KLY +   G  
Sbjct: 221 DDNGYLAHFDLETKKFTRVSDSEMH-------------FNNMYLDKSGNKLYLVSAKGVE 267

Query: 428 ETLIN 432
           + L  
Sbjct: 268 DKLYT 272


>gi|150021304|ref|YP_001306658.1| hypothetical protein Tmel_1426 [Thermosipho melanesiensis BI429]
 gi|149793825|gb|ABR31273.1| hypothetical protein Tmel_1426 [Thermosipho melanesiensis BI429]
          Length = 382

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 103/278 (37%), Gaps = 22/278 (7%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-FSPNQ--------Q 224
           +  I F+++S  + +       +  D  +  Y     D   F    FS N         +
Sbjct: 46  DYEIYFLTDSTTASVDYYVNLYLTYDATDDIYKATYEDGEYFVSTHFSFNGYKKYSTFLK 105

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           +V Y   +    + +Y + T+  +   ++  +  +     F  +GK   I+ +     +I
Sbjct: 106 EVIYYPLEK---ISIYRLKTKDFKDYLQLTFYPGVDEYGDF-KDGKYIFITDRLGGNRNI 161

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             +DL + +   L           +SPD   IVF+    G   +YVM       K+I + 
Sbjct: 162 AYIDLSNESLNILPVWGSSEYYPKFSPDLKNIVFQGSLHGAWNVYVMPFERDYAKKIKRI 221

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
              + + PVW    + + + +   +   +        +   +    ++    ++P  SG 
Sbjct: 222 STGTAYTPVWY-DNENLLYIQDLEKGNLLVKYNLKTRKYEEIHTFGDM---VFTPFASGT 277

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            + ++     + G  +Y   ++G NE + +T     DP
Sbjct: 278 EIFYTSLNGANFG--IYKY-IDGENEKVEDTFYNEHDP 312



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 91/259 (35%), Gaps = 17/259 (6%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E GDF           + G    +   +  +  NI  +  S +   + P+FSP+ + + 
Sbjct: 138 DEYGDFKDGKYIFITDRLGGNRNIAYIDLSNESLNILPVWGSSE---YYPKFSPDLKNIV 194

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +          VY+M    D A K           P +  + +  L     ++   +   
Sbjct: 195 FQGSLHG-AWNVYVMPFERDYAKKIKRISTGTAYTPVW-YDNENLLYIQDLEKGNLLVKY 252

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +L++   E +    F ++  +     ++I + S       +Y    +G ++K   +D   
Sbjct: 253 NLKTRKYEEI--HTFGDMVFTPFASGTEIFYTSLNGANFGIYKY-IDGENEKV--EDTFY 307

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLI 405
           +  DPV     D + FT      + I +     S    L +D N     P  S +G  L+
Sbjct: 308 NEHDPVI--YNDKLIFTSNRDGIYRIWMKDLKTSSVTCLTKDINYDVFYPVIS-NG--LL 362

Query: 406 FSRKKDGDTGSKLYSIDLN 424
           F      +    ++   L+
Sbjct: 363 FFSVYKDNEEPDIFVKKLD 381



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 1/87 (1%)

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            G  I  T   G    I  +        +L V  S+   P +SP  ++++F     G   
Sbjct: 145 DGKYIFITDRLGGNRNIAYIDLSNESLNILPVWGSSEYYPKFSPDLKNIVFQGSLHGAWN 204

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQW 442
             +   + +   +    +   A  P W
Sbjct: 205 VYVMPFERDYAKKIKRISTGTAYTPVW 231


>gi|116622280|ref|YP_824436.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225442|gb|ABJ84151.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 839

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 71/216 (32%), Gaps = 22/216 (10%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            +        +     +   P+ +G        PR S +G         D  + +  +  
Sbjct: 293 WFGFRTPPNQFWSGQALGGPPRALG--------PRVSPDGHTLAFQAMTDGQLQVAVMKP 344

Query: 290 QSNATERLTN--TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +S     LT+       +S ++S D S++ F+   +    ++ +   G + + +      
Sbjct: 345 ESGNWTVLTHQKDFGELLSIAWSRDGSKLYFDRHSDSPRGVFSVPVLGGEPRLVL----G 400

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS---NLQAPTWSPSGRSL 404
             + P     G L+     +     +     D  +   L       +L A   +P G+++
Sbjct: 401 GAYFPCVLADGSLVVTMFNAQRIQQLFQYWPDSGKLEPLPATPFGLSLGALRGTPDGKAI 460

Query: 405 IFSRK----KDGDTGSKLYSIDLNGRNETLINTPAY 436
           +F       K       LY +D+  R    + TP  
Sbjct: 461 LFYGNALDEKGAKGDRSLYLLDVASRKLVNV-TPGE 495



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 70/216 (32%), Gaps = 17/216 (7%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                   PR SP+   +A+    D  +    +     +            +L+  +S +
Sbjct: 310 GGPPRALGPRVSPDGHTLAFQAMTDGQLQVAVMKPESGNWTVLTHQKDFGELLSIAWSRD 369

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FESDREGKE 326
           G +       D    ++SV +       +   L          D S +V  F + R   +
Sbjct: 370 GSKLYFDRHSDSPRGVFSVPVLGGEPRLV---LGGAYFPCVLADGSLVVTMFNAQRI--Q 424

Query: 327 QLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAF------TKFSGEKFAIGVMKKD 379
           QL+    +    + +       S      +P G  I F       K +    ++ ++   
Sbjct: 425 QLFQYWPDSGKLEPLPATPFGLSLGALRGTPDGKAILFYGNALDEKGAKGDRSLYLLDVA 484

Query: 380 GSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDG 412
             +   +     +    A   +P GRS+++++  +G
Sbjct: 485 SRKLVNVTPGETINGFIAAAATPDGRSVLYTKADNG 520



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 65/221 (29%), Gaps = 21/221 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G ++  L    D        +        A       L +  +     R  +R+      
Sbjct: 621 GGSLSSLIEGNDDYGLPAAMAGVGS---VALLTRRAPLEIVTVSIADGRIARRVAFQAEG 677

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             +   S +G         +    I+S+     A  +L     ++      P+   ++  
Sbjct: 678 TSSLASSPDGSTFYY----NSGGYIWSMPAGGGAPHKLAAGEGVSA----DPNGRDLLVA 729

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDK-----EASYFDPVWSPQGDLIAFTKFSGEK--FA 372
                  +L  +      ++ I                   P G ++A    S ++  + 
Sbjct: 730 RQESDSVRLVRVGVRDGAEQPIVFRGGMRLAGTDLGAAAIGPGG-MLAVKAISTDRWIYQ 788

Query: 373 IGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKD 411
           +G++         +   ++++A  PTW+  G+ +      D
Sbjct: 789 VGLIDPRAGTIVPVPIGADIEAGVPTWTRDGKIVASGTTYD 829



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 82/234 (35%), Gaps = 24/234 (10%)

Query: 221 PNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALI 274
           P+ + + +          +    +YL+D    +      G   +  +A   + +G+  L 
Sbjct: 455 PDGKAILFYGNALDEKGAKGDRSLYLLDVASRKLVNVTPGETINGFIAAAATPDGRSVLY 514

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASY----SPDSSQIVFESDREGKEQLYV 330
           +   +  + + S     +   RL  TL    S ++    + D S  ++         L  
Sbjct: 515 TKADNGFVSVISAPRGGSGPRRLLFTL---TSTAWYLDVAADGS--IYIDQMAADNTLLR 569

Query: 331 MQSNGSDQKRIS----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             + G   +R++    Q    S    +  P G  + +   +G +  + +++  GS   L+
Sbjct: 570 FSAQGGAVERLTEPQSQIPGNSGGLALVLPDGRPLVY-NVAGLQRRMQIVQAGGSLSSLI 628

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASD 439
             + +   P       S+    ++      ++ ++ + +GR    +   A  + 
Sbjct: 629 EGNDDYGLPAAMAGVGSVALLTRR---APLEIVTVSIADGRIARRVAFQAEGTS 679


>gi|307822647|ref|ZP_07652878.1| Fibronectin type III domain protein [Methylobacter tundripaludum
           SV96]
 gi|307736251|gb|EFO07097.1| Fibronectin type III domain protein [Methylobacter tundripaludum
           SV96]
          Length = 3056

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 97/281 (34%), Gaps = 44/281 (15%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           LWDV   +               + A+ +SD I+                   + ++ + 
Sbjct: 78  LWDVVSGQ--------VRMTLPSQFANPVSDIIFSQ---------------DGNTLASVS 114

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            NS+ + D    + R   P +  ++ +  FSP+ + +A          R+ L D++    
Sbjct: 115 DNSIRLWDVTSGDSRLTLP-KSGVVTDLAFSPDGKSLA----AVGQDARITLWDSQSGST 169

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI--NISA 307
            + I + +  + A  FS +     I     +   I      +   ++L N   +      
Sbjct: 170 SQVITDHQGGVNAIAFSPDSTILAI---GGQNAQINLWSKATG-LKQL-NLPGVTAVTDL 224

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD   +          ++ +  S      +I    +       +SP   ++A     
Sbjct: 225 LFSPDGKTLAAV---GQNARITLWDSQSGSTSQILTGHQNGVNAIAFSPNSKILA---TG 278

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLI 405
           G+   I +  +   +E+  +   N  A T   ++P G++L 
Sbjct: 279 GQDARIKLWDRTTGKEQANLPGENGVAITGLVFNPDGKTLA 319



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 104/276 (37%), Gaps = 25/276 (9%)

Query: 165 SITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +++   G   + ++F ++   +VS      + + D             +  +     SP+
Sbjct: 482 ALSEHHGAAVTGVVFSADGKQLVSVGRDTEIQMTDVANGKKGRTLFGHEHPIRTVAASPD 541

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A       +  R+ L D +  +  + +      + A  FS++GKR   S   D  +
Sbjct: 542 GKLLA----SAGEETRIMLWDAQAGKLLRILSGHTDFVNAVSFSADGKRLA-SAGADGRI 596

Query: 283 DIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++  D+++    +        ++A ++S +     F +      Q+ +  +   +Q + 
Sbjct: 597 LLW--DVKTGQLVQTLLGHSNEVNAVAFSRNGK---FLASGSADSQVILWNAATGEQIQS 651

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSP 399
               +A+     +SP G  +     +GE   I V      +   ++    + + A  + P
Sbjct: 652 FAGHQAAIRAVAFSPNGQKLV---SAGEDTKILVWNTATRKLDKQMAGATNAISALMFGP 708

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTP 434
           SG  +       G    ++   D+  G+ + +IN P
Sbjct: 709 SGSLIA------GSEDGEVKEWDVEKGQTKQIINVP 738



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 84/245 (34%), Gaps = 20/245 (8%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           YQ +T       + I FV     S   + +        ++I+      D +     FSP+
Sbjct: 8   YQYLTSRVLIILALIAFVQTIGTSEPARAASANQAIKTSSIKLPGEGPDPV----AFSPD 63

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              +A    D + +L   +        P +  N  S I+   FS +G            +
Sbjct: 64  GNTLASTDSDGQIMLWDVVSGQVRMTLPSQFANPVSDII---FSQDGNTLASVSDNSIRL 120

Query: 283 DIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
                D+ S    RLT     +    ++SPD   +          ++ +  S      ++
Sbjct: 121 W----DVTSGD-SRLTLPKSGVVTDLAFSPDGKSLAAV---GQDARITLWDSQSGSTSQV 172

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPS 400
             D +       +SP   ++A     G+   I +  K    ++L L   + +    +SP 
Sbjct: 173 ITDHQGGVNAIAFSPDSTILAI---GGQNAQINLWSKATGLKQLNLPGVTAVTDLLFSPD 229

Query: 401 GRSLI 405
           G++L 
Sbjct: 230 GKTLA 234



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 70/223 (31%), Gaps = 14/223 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   + +   +G     L+      +    FS + +++     D E    + + D 
Sbjct: 462 GGATRDGKVRLWASNGKERFALSEHHGAAVTGVVFSADGKQLVSVGRDTE----IQMTDV 517

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  + +      I     S +GK         E   I   D Q+    R+ +     
Sbjct: 518 ANGKKGRTLFGHEHPIRTVAASPDGKLLA---SAGEETRIMLWDAQAGKLLRILSGHTDF 574

Query: 305 ISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           ++A S+S D  ++          ++ +         +             +S  G  +A 
Sbjct: 575 VNAVSFSADGKRLA---SAGADGRILLWDVKTGQLVQTLLGHSNEVNAVAFSRNGKFLA- 630

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
              S +   I      G Q +      + ++A  +SP+G+ L+
Sbjct: 631 -SGSADSQVILWNAATGEQIQSFAGHQAAIRAVAFSPNGQKLV 672


>gi|238793163|ref|ZP_04636791.1| hypothetical protein yinte0001_38020 [Yersinia intermedia ATCC
           29909]
 gi|238727536|gb|EEQ19062.1| hypothetical protein yinte0001_38020 [Yersinia intermedia ATCC
           29909]
          Length = 434

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 58/160 (36%), Gaps = 20/160 (12%)

Query: 279 DEAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQL 328
           +                RLT T       +  S   +   SPD S I     D  G  QL
Sbjct: 280 EGTQTTLPAPPAGVIQRRLTYTSERLFPGLATSPRHWLRSSPDGSAIACLMKDDNGIVQL 339

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           ++   NG   ++++           W PQG  +AF   +    ++ +      Q R L  
Sbjct: 340 WLASPNGGALRQLTFSVGGIQSAFSWHPQGGSLAFVCDN----SVMLCDSATGQLRRLTA 395

Query: 389 DS----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            S       A  ++P G  + F R+ DG    ++++++ +
Sbjct: 396 RSAVAPLADAVVFAPDGNKVAFMREIDG--WVQIFTVNTS 433



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 47/130 (36%), Gaps = 11/130 (8%)

Query: 212 QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +   PR     SP+   +A    DD  I++++L         +   +   +  A  +  
Sbjct: 308 GLATSPRHWLRSSPDGSAIACLMKDDNGIVQLWLASPNGGALRQLTFSVGGIQSAFSWHP 367

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI---NISASYSPDSSQIVFESDREG 324
            G              +   D  +    RLT    +     +  ++PD +++ F  + +G
Sbjct: 368 QGGSLAFVCDNS----VMLCDSATGQLRRLTARSAVAPLADAVVFAPDGNKVAFMREIDG 423

Query: 325 KEQLYVMQSN 334
             Q++ + ++
Sbjct: 424 WVQIFTVNTS 433



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 43/139 (30%), Gaps = 15/139 (10%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEA-----SYFDPVW---SPQGDLIA-FTKFSGEKFAI 373
           EG +        G  Q+R++   E      +     W   SP G  IA   K       +
Sbjct: 280 EGTQTTLPAPPAGVIQRRLTYTSERLFPGLATSPRHWLRSSPDGSAIACLMKDDNGIVQL 339

Query: 374 GVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRN 427
            +   +G   R L         A +W P G SL F              +L  +      
Sbjct: 340 WLASPNGGALRQLTFSVGGIQSAFSWHPQGGSLAFVCDNSVMLCDSATGQLRRLTARSAV 399

Query: 428 ETLINTPAYASDPQWVGFM 446
             L +   +A D   V FM
Sbjct: 400 APLADAVVFAPDGNKVAFM 418



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 7/101 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +   +G  +R LT S   I     + P    +A+   +      V L D+   +  +
Sbjct: 338 QLWLASPNGGALRQLTFSVGGIQSAFSWHPQGGSLAFVCDN-----SVMLCDSATGQLRR 392

Query: 252 RIGN--FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                    +  A  F+ +G +     + D  + I++V+  
Sbjct: 393 LTARSAVAPLADAVVFAPDGNKVAFMREIDGWVQIFTVNTS 433


>gi|116625045|ref|YP_827201.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228207|gb|ABJ86916.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 814

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 66/208 (31%), Gaps = 16/208 (7%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIY 285
           +  +  +            DR    I +    + AP +S +G +A+IS +  +     ++
Sbjct: 330 WVDHGQKKPAGAAPAAANRDREGA-ISDRDIQMSAPLWSEDGSKAVISARSADNKDRWLF 388

Query: 286 SVDLQSNATERLTN--TLFINISAS-------YSPDSSQIVFESDREGKEQLYVMQSNGS 336
           ++D  S  T  L N                  +  +   + F S++ G   LY +  +G 
Sbjct: 389 ALDPASGKTRVLVNIHDDAWVGGPQGAANTLGWMKNDRDVYFISEKTGYVHLYAVGFDGG 448

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQA 394
           + + ++  K         S        T  +   F   +  M  DG     + +     A
Sbjct: 449 EPRALTSGK-WEVLGVRQSKDKSRFYLTASADGPFDQFLYEMPGDGGSLTRISQAPGKHA 507

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              SP  R +             LY  D
Sbjct: 508 AVLSPDERYIADLYSYANKP-PDLYIQD 534



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 67/203 (33%), Gaps = 18/203 (8%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI----------GNFRS 258
            RD  +  P +S +  K A  +    D    +L          R+          G  + 
Sbjct: 356 DRDIQMSAPLWSEDGSK-AVISARSADNKDRWLFALDPASGKTRVLVNIHDDAWVGGPQG 414

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                 +  N +      +K   + +Y+V         LT+  +  +    S D S+   
Sbjct: 415 AANTLGWMKNDRDVYFISEKTGYVHLYAVGFDGGEPRALTSGKWEVLGVRQSKDKSRFYL 474

Query: 319 ESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGV 375
            +  +G     LY M  +G    RISQ         V SP    IA    ++ +   + +
Sbjct: 475 TASADGPFDQFLYEMPGDGGSLTRISQAP--GKHAAVLSPDERYIADLYSYANKPPDLYI 532

Query: 376 MKKDGSQERLLVEDSNLQAPTWS 398
              D   ++ L   +   +P +S
Sbjct: 533 Q--DNRPQQDLKRLTTSPSPEFS 553



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 58/137 (42%), Gaps = 14/137 (10%)

Query: 218 RFSPNQQKVAYAT--YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKR 271
           R+S +  ++ +    + +++I  +       D +  R  +   + L P      S + + 
Sbjct: 45  RWSHDSNRIIFQWKQHTEKEIAPMDTYTVNRDGSGLRKLSEDEIKLLPPALGDLSKDKRM 104

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            + S     A D+++ D  +  T +LT T     +  ++ D  +I F   R G   LYVM
Sbjct: 105 LVYS----NAGDLFTFDNTTGKTTQLTKTTDAETNPRFTQDGKRISFT--RNGN--LYVM 156

Query: 332 QSNGSDQKRISQDKEAS 348
             + +   +++  + A+
Sbjct: 157 SLDSALLVQLTDIRSAA 173



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 66/174 (37%), Gaps = 20/174 (11%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-----Y 285
           +      +  L    I R P  +G   + +   R+S +  R +   ++    +I     Y
Sbjct: 15  FQARPANQFALTVDNIMRGPALVGYEPTGV---RWSHDSNRIIFQWKQHTEKEIAPMDTY 71

Query: 286 SVDLQSNATERLTNTLFINISASY---SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +V+   +   +L+      +  +    S D   +V+ +       L+   +      +++
Sbjct: 72  TVNRDGSGLRKLSEDEIKLLPPALGDLSKDKRMLVYSN----AGDLFTFDNTTGKTTQLT 127

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +  +A   +P ++  G  I+FT+       + VM  D +    L +  +  APT
Sbjct: 128 KTTDAE-TNPRFTQDGKRISFTRNG----NLYVMSLDSALLVQLTDIRSAAAPT 176



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 57/145 (39%), Gaps = 18/145 (12%)

Query: 305 ISASYSPDSSQIVFESDREGKEQL-----YVMQSNGSDQKRISQD--KEASYFDPVWSPQ 357
               +S DS++I+F+  +  ++++     Y +  +GS  +++S+D  K         S  
Sbjct: 42  TGVRWSHDSNRIIFQWKQHTEKEIAPMDTYTVNRDGSGLRKLSEDEIKLLPPALGDLSKD 101

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGS 416
             ++ ++        +        +   L + ++ +  P ++  G+ + F+R        
Sbjct: 102 KRMLVYSNAGD----LFTFDNTTGKTTQLTKTTDAETNPRFTQDGKRISFTRN------G 151

Query: 417 KLYSIDLNGRNETLINTPAYASDPQ 441
            LY + L+      +     A+ P 
Sbjct: 152 NLYVMSLDSALLVQLTDIRSAAAPT 176


>gi|262198770|ref|YP_003269979.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
 gi|262082117|gb|ACY18086.1| serine/threonine protein kinase with WD40 repeats [Haliangium
            ochraceum DSM 14365]
          Length = 1823

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 53/276 (19%), Positives = 97/276 (35%), Gaps = 23/276 (8%)

Query: 135  DRKQIIGKKFFSSPASWR----KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
            D  ++    +      W      + HT+SDD  +  T            V+     G+  
Sbjct: 1262 DGSRVGTSGYLEVAKLWDAATGDLLHTLSDD--EEGTTVAAFSADGAALVTGGGAGGVRV 1319

Query: 191  NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             +      DG  +R         + +   SP+ +  A A Y   D + VY + T      
Sbjct: 1320 WN----TADGT-LRESFEGEPTPVHQLALSPDGRHAAVAGYHGND-VTVYRLGTGESL-- 1371

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASY 309
             R+ +    I    FSS+G R  I+  +D +  I+  D++S   +R L        +A +
Sbjct: 1372 -RLSDHLKKIRDLDFSSDGHRI-ITASEDRSAKIW--DVRSGQLQRTLEGHTSGVTTAGF 1427

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            S D    VF + REG   +    +     +        + +    SP  D +    F G 
Sbjct: 1428 SLDGDW-VFTASREGT--IKTWDARTGAPRWTFFGHRTAIWSSHLSPSNDALVTGSFDGT 1484

Query: 370  KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
               +  ++  G++ +L   +      +  P G  + 
Sbjct: 1485 A-RLWDIRYAGAELQLPPSEQPYAGASAQPGGELIA 1519



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 85/254 (33%), Gaps = 24/254 (9%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            R G     +     + ++  RFSP+ +++  A +D +  L            P       
Sbjct: 1197 RTGKLHTTIDGHHGENVWMVRFSPDGERLITAGFDGKARLWEV-----ASGEPLWTAEHD 1251

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNAT-ERLTNTLFINISASYSPDSSQ 315
              +    FS +G R          +++  + D  +      L++       A++S D + 
Sbjct: 1252 DKVGWADFSPDGSRV----GTSGYLEVAKLWDAATGDLLHTLSDDEEGTTVAAFSADGAA 1307

Query: 316  IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            +V      G   + V  +     +   + +         SP G   A   + G    +  
Sbjct: 1308 LV---TGGGAGGVRVWNTADGTLRESFEGEPTPVHQLALSPDGRHAAVAGYHGNDVTVYR 1364

Query: 376  MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL----- 430
            +   G   RL      ++   +S  G  +I + +   D  +K++ +       TL     
Sbjct: 1365 L-GTGESLRLSDHLKKIRDLDFSSDGHRIITASE---DRSAKIWDVRSGQLQRTLEGHTS 1420

Query: 431  -INTPAYASDPQWV 443
             + T  ++ D  WV
Sbjct: 1421 GVTTAGFSLDGDWV 1434



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 107/326 (32%), Gaps = 57/326 (17%)

Query: 109  QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
              LVTG              RLWD+         ++  +           S+  Y   + 
Sbjct: 1474 DALVTGS--------FDGTARLWDI---------RYAGAELQLPP-----SEQPYAGASA 1511

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            + G      +  + ++     +  + +  + G           + L    ++P   ++A 
Sbjct: 1512 QPGGELIATMDSAGTLRVWNRQAEVALERQTGH----------EYLHNATWNPQGTRIAT 1561

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
              +         + DTR +   + +      I A  FS +G+R   +   D  + I+  +
Sbjct: 1562 TGW----PRDTLIWDTRTELPLQTLPTGEVRIAAASFSPDGERLA-TAGDDGRVHIW--N 1614

Query: 289  LQSNATER-LTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKE 346
            + +    R          +A+++P    +    SDR     + +  ++  ++ +      
Sbjct: 1615 VATGELIRAFVGHEGTIKAAAFAPSGQHLATAGSDRS----VRLWDASTGERLQTFTGHT 1670

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
                   ++  G  +      G      V   +G    +L    + +     S  G+   
Sbjct: 1671 LPINTVHFNSDGSRLISAAEDGTA---TVWNLEGEIIAVLTRAGAGVSDGVLSADGQFAA 1727

Query: 406  FSRKKDG-------DTGSKLYSIDLN 424
             +  +DG       ++GS L+++DL+
Sbjct: 1728 -TASQDGMLAVWSVESGSVLWTLDLH 1752



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 28/189 (14%)

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +     +     M+L  RFS +G         DEA      D ++      T     +  
Sbjct: 1157 NGLRAVLPGHTGMVLTARFSPDGSLLA---TGDEAGFTRIWDARTGKLH--TTIDGHHGE 1211

Query: 307  ASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              +    SPD  +++  +  +GK +L+ +    S +   + + +       +SP G  + 
Sbjct: 1212 NVWMVRFSPDGERLI-TAGFDGKARLWEVA---SGEPLWTAEHDDKVGWADFSPDGSRV- 1266

Query: 363  FTKFSGEKFAIG-VMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSK 417
                +     +  +         LL   S+ +       +S  G +L+      G  G +
Sbjct: 1267 ---GTSGYLEVAKLWDAATGD--LLHTLSDDEEGTTVAAFSADGAALV---TGGGAGGVR 1318

Query: 418  LYSIDLNGR 426
            +++   +G 
Sbjct: 1319 VWNT-ADGT 1326


>gi|124023478|ref|YP_001017785.1| hypothetical protein P9303_17781 [Prochlorococcus marinus str. MIT
           9303]
 gi|123963764|gb|ABM78520.1| Hypothetical protein P9303_17781 [Prochlorococcus marinus str. MIT
           9303]
          Length = 681

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 75/230 (32%), Gaps = 23/230 (10%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A             L    +   P+ +      +     S +GK+ +        ++++
Sbjct: 20  IALPIRLSSPAFADTLPQREVPLIPREVLLGNPEVSGVTLSPDGKQIVFLAPHRGVLNLW 79

Query: 286 SVDLQ-SNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRI 341
           + +L+  +    LTN+        S+S D   ++   D  G E   L  +     +   +
Sbjct: 80  AQELEAGSKPRLLTNSTNRPTRPASWSVDGRYLITSRDSYGDENTVLIRIDPTTGEAIDL 139

Query: 342 SQDKE---ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPT 396
           +  K    A + D    P   +I           + V+  +  + RLL E  D +L +  
Sbjct: 140 TPGKGVKAAIWGDDQDVPDELVIGLNDRDPRYHDLWVINLETGERRLLYEANDGHLVSVD 199

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           W   G   +  R +    G   Y + L G+               W  F+
Sbjct: 200 WI-DGDWQLVLRNRIQPDGGSTYDLRLPGQKG-------------WKPFL 235


>gi|116626708|ref|YP_828864.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229870|gb|ABJ88579.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 874

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/273 (18%), Positives = 82/273 (30%), Gaps = 43/273 (15%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQ 223
               G ++  + +V     +GI   +L     D   G      T   D I   P      
Sbjct: 498 HPRSGRWH--MFYVRTDAGTGIANRALLTAPIDPRTGEPAGEPTQVVDAIANWPS----- 550

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP------------RFSSNGKR 271
               YA +D  D   +Y   T       R+  F     A               S +  R
Sbjct: 551 --TPYARFDVADSGLIYWYRTTPSLPIWRLQWFDRNGNAAGTVGDAAGHTSIALSPDETR 608

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S+Q      I+  +LQ+    R+ ++L    +  +SPDS  + + S+ E   ++   
Sbjct: 609 LA-SLQGYPQPHIWIYNLQNGTGSRI-SSLGNEGTPVWSPDSRFLYYTSETEAGNKIVRQ 666

Query: 332 QSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSGEKF------------AIGVMK 377
            S       I               +P G  +     +   F             +    
Sbjct: 667 DSAPGSLPEILWQGPEGRRISLQDVTPDGRYLILHLINAVGFTTGRAGLHFSRLDLNAPS 726

Query: 378 KDGSQERLLVEDSNLQAPT---WSPSGRSLIFS 407
                E L  E+  +  P     SP G S++FS
Sbjct: 727 TARQPEPLFAEEGGVANPVNARISPDGHSIVFS 759



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 71/232 (30%), Gaps = 24/232 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           S  +    P F+P  +   Y               +    A +R+      +   R   +
Sbjct: 442 SESETPMAPLFTPEGEGFVYLIRSANGTTLFRSTLSSTRPAGERVLETNYAVSFARHPRS 501

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLF------INISASYSPDSSQIVFESDR 322
           G+  +  V+ D    I +  L +   +  T          ++  A++ P +    F+   
Sbjct: 502 GRWHMFYVRTDAGTGIANRALLTAPIDPRTGEPAGEPTQVVDAIANW-PSTPYARFDVAD 560

Query: 323 EGK------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            G              +L     NG+     +    A +     SP    +A +     +
Sbjct: 561 SGLIYWYRTTPSLPIWRLQWFDRNGNAAG--TVGDAAGHTSIALSPDETRLA-SLQGYPQ 617

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             I +          +    N   P WSP  R L ++ +   + G+K+   D
Sbjct: 618 PHIWIYNLQNGTGSRISSLGNEGTPVWSPDSRFLYYTSET--EAGNKIVRQD 667



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 11/90 (12%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP G  +           + +   DG   + L          WSP   ++ F      
Sbjct: 329 HFSPNGRWMLNVSDG-----LRLRSVDGVSWKSLPATDGASDAFWSPDSSTIGFFA---- 379

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             G +L +I ++G N   +      +   W
Sbjct: 380 --GGRLRAISVDGTNLRNLAAAPPFAAGAW 407


>gi|119492093|ref|ZP_01623546.1| Serine/Threonine protein kinase with WD40 repeats [Lyngbya sp. PCC
           8106]
 gi|119453303|gb|EAW34468.1| Serine/Threonine protein kinase with WD40 repeats [Lyngbya sp. PCC
           8106]
          Length = 630

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 102/253 (40%), Gaps = 28/253 (11%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG    S+ V+D    ++ Y        +     SPN + +   + D+     + + D
Sbjct: 356 VASGTTDGSIKVLDIHTGDVLYTLSGHSGPVGALAISPNGRLLVSGSGDN----TLKVWD 411

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLF 302
               +  K +   ++ +    FS +G+    SV +D+ + ++  D++++    +L     
Sbjct: 412 LWSGKLIKMLYGHKAWVYGVAFSPDGQTVA-SVSRDQTLRLW--DVETSEEIGQL-KGYA 467

Query: 303 INI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            ++ S  +SPD   +V     +G  +++  +       R  +    + +    +P G  +
Sbjct: 468 EDVQSIVFSPDRQTLV-SGGSDGTIEIWNWR--TGHLLRNIKGHPEAIWSVAITPDGRTL 524

Query: 362 AFTKFSGEKFAIGVMKKDGSQ--------ERLLVEDSN-LQAPTWSPSGRSLIFSRKKDG 412
           A   +     +I +   +  Q        ER L+   + +Q+ ++SP G++L      D 
Sbjct: 525 ATGSWD---HSIKLWDLNRLQSEYFSSLPERTLIGHGDKVQSLSFSPDGQTLA---SGDF 578

Query: 413 DTGSKLYSIDLNG 425
               KL+ I+  G
Sbjct: 579 AGTVKLWQIETGG 591



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 84/229 (36%), Gaps = 20/229 (8%)

Query: 161 DIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+  +++G  G   +  +  +  + VSG   N+L V D     +  +       ++   F
Sbjct: 374 DVLYTLSGHSGPVGALAISPNGRLLVSGSGDNTLKVWDLWSGKLIKMLYGHKAWVYGVAF 433

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ Q VA  + D      + L D        ++  +   + +  FS + ++ L+S   D
Sbjct: 434 SPDGQTVASVSRDQ----TLRLWDVETSEEIGQLKGYAEDVQSIVFSPD-RQTLVSGGSD 488

Query: 280 EAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             ++I+  + ++      +        S + +PD   +   S       + +   N    
Sbjct: 489 GTIEIW--NWRTGHLLRNIKGHPEAIWSVAITPDGRTLATGS---WDHSIKLWDLNRLQS 543

Query: 339 KRISQDKEASYFDP-------VWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +  S   E +            +SP G  +A   F+G    +  ++  G
Sbjct: 544 EYFSSLPERTLIGHGDKVQSLSFSPDGQTLASGDFAGTV-KLWQIETGG 591


>gi|188992635|ref|YP_001904645.1| Putative dipeptidyl peptidase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21112139|gb|AAM40404.1| alanyl dipeptidyl peptidase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574778|gb|AAY50188.1| alanyl dipeptidyl peptidase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|167734395|emb|CAP52605.1| Putative dipeptidyl peptidase [Xanthomonas campestris pv.
           campestris]
          Length = 777

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 84/271 (30%), Gaps = 46/271 (16%)

Query: 214 LFEPRFSPNQQKVAYA-----TYDDEDILRVYLMDTRIDR--APKRIGNFRSMILAPRFS 266
           +  P  +P+   V +A     T + +    +++ + R      PKR+      + +P  S
Sbjct: 108 VSSPTLTPDGSVVVFAKRQAKTANGKAATSLWMRNLRTRDLAPPKRLTPEGWNVNSPALS 167

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------- 319
            +GK+      K     +Y+  L     ++LT       S   SPD  +I F        
Sbjct: 168 PDGKKVYFLSSKSGTQQLYAQPLAGGIPQQLTAFAVDLDSYKLSPDGKRIAFSAGVFQDC 227

Query: 320 -SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD  G  +  +     +    +  D+        W+       F        A  V   
Sbjct: 228 GSD-LGCTKKKLADLKNAKASGVVYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVAGA 286

Query: 379 DGSQERLLVED-----SNLQAPTWSPSGRSLIFS----------------------RKKD 411
                 L  +             WSP G S++ S                        + 
Sbjct: 287 SAISATLAGDAPSKPFGGNDDYAWSPDGASVVASVRIPQPHGPGAGKTAAQGKATGNDEA 346

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             T   LY +D  G++  +  T   A++P W
Sbjct: 347 WQTNFDLYRLDAAGKSAPVNLT---AANPAW 374



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/307 (15%), Positives = 92/307 (29%), Gaps = 60/307 (19%)

Query: 183 SVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +G    SL + +   RD A  + LTP    +   P  SP+ +KV + +   +   + 
Sbjct: 128 KTANGKAATSLWMRNLRTRDLAPPKRLTPEGWNVN-SPALSPDGKKVYFLS--SKSGTQQ 184

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-------QKDEAMDIYSVDLQSN 292
                     P+++  F   + + + S +GKR   S                   DL++ 
Sbjct: 185 LYAQPLAGGIPQQLTAFAVDLDSYKLSPDGKRIAFSAGVFQDCGSDLGCTKKKLADLKNA 244

Query: 293 ATE-RLTNTLFINISASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDK 345
                + + LF+    +++      +F ++      +       +  +   D        
Sbjct: 245 KASGVVYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVAGASAISATLAGDAPSKPFGG 304

Query: 346 EASYFDPVWSPQGDLIAFTKFSG------------------------EKFAIGVMKKDG- 380
              Y    WSP G  +  +                              F +  +   G 
Sbjct: 305 NDDY---AWSPDGASVVASVRIPQPHGPGAGKTAAQGKATGNDEAWQTNFDLYRLDAAGK 361

Query: 381 SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPA 435
           S    L     +    P +S  G++L +   K     +    L ++DL       I    
Sbjct: 362 SAPVNLTAANPAWDAGPVFSADGKTLYYRAMKRPGFEADRFGLMAMDLASGKTREIA--- 418

Query: 436 YASDPQW 442
               P+W
Sbjct: 419 ----PKW 421



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/193 (12%), Positives = 60/193 (31%), Gaps = 22/193 (11%)

Query: 165 SITGEKGDFNSRILFVSESVVSG---IIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFS 220
            I    G    +     ++  +         L  +D  G +    LT +       P FS
Sbjct: 322 RIPQPHGPGAGKTAAQGKATGNDEAWQTNFDLYRLDAAGKSAPVNLTAANPAWDAGPVFS 381

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF---------SSNGKR 271
            + + + Y                R       + + ++  +AP++         S +G  
Sbjct: 382 ADGKTLYYRAMKRPGF-----EADRFGLMAMDLASGKTREIAPKWDRSAGEIVLSDDGSS 436

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYV 330
              S        ++ +D+ S    ++     ++     +   + + F  +  +  +Q+ V
Sbjct: 437 LYTSADDLGEHPLFKIDIASGDATKVVGEGSVHA-PVLA--GTTLAFTRNSLKSGDQIVV 493

Query: 331 MQSNGSDQKRISQ 343
               G   + I+Q
Sbjct: 494 SDVQGQGLRAITQ 506


>gi|322701539|gb|EFY93288.1| wd-repeat protein [Metarhizium acridum CQMa 102]
          Length = 1529

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 84/239 (35%), Gaps = 16/239 (6%)

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATYDDE 234
              F  +S   G +     +   D  +              P    SP+ Q VA      E
Sbjct: 1129 FTFAGDSKTLGSVSTDGTICLWDIESGICTRSFSPGWNNWPTIALSPDLQTVA--MGGLE 1186

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA- 293
            D  R  L+D +     +   +  S +     S + K    +   D+ + I+  D++S   
Sbjct: 1187 DTTR--LLDIKDWSQQEEAQSHHSRVTDVVVSPD-KTVAATASHDKDIRIW--DIESGKC 1241

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             +RL        S ++SPD   +   S   G + + V      + ++  +   A+     
Sbjct: 1242 LQRLCGHKDAVHSVAFSPDGQSLASAS---GDKTVRVWDPKTGEARQTLKGHTAAVKCVA 1298

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP G +IA      +   +  ++   S   +  +  +     +S   ++L  S  KDG
Sbjct: 1299 FSPDGKMIASFS-KDKTVRLWAVETSSSVP-IKGQSESQSCIAFSNDSKTLA-SVNKDG 1354



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 56/329 (17%), Positives = 118/329 (35%), Gaps = 45/329 (13%)

Query: 100  FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA---- 155
            F+D+   G      G V  +G         LWD++    I  + F     +W  IA    
Sbjct: 1126 FRDFTFAG-DSKTLGSVSTDG------TICLWDIESG--ICTRSFSPGWNNWPTIALSPD 1176

Query: 156  -HTISDDIYQSITG-----------EKGDFNSRILFVSES-----VVSGIIKNSLCVMDR 198
              T++    +  T            E    +SR+  V  S       +      + + D 
Sbjct: 1177 LQTVAMGGLEDTTRLLDIKDWSQQEEAQSHHSRVTDVVVSPDKTVAATASHDKDIRIWDI 1236

Query: 199  DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            +              +    FSP+ Q +A A+ D      V + D +   A + +    +
Sbjct: 1237 ESGKCLQRLCGHKDAVHSVAFSPDGQSLASASGDK----TVRVWDPKTGEARQTLKGHTA 1292

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIV 317
             +    FS +GK    S  KD+ + +++V+  S+   +       + S  ++S DS  + 
Sbjct: 1293 AVKCVAFSPDGKMIA-SFSKDKTVRLWAVETSSSVPIK---GQSESQSCIAFSNDSKTLA 1348

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVM 376
               +++G   + +  +   +Q  +   +E+       +SP    +     +G  +   + 
Sbjct: 1349 -SVNKDGA--IALWDTETGNQVHVFGVEESDCPMALAFSPDDSTVMMGSVNG--WIYALD 1403

Query: 377  KKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            K   S+  +L +       T++  G +++
Sbjct: 1404 KASNSRRLVLSQQETFSDMTFAADGETIV 1432



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 82/261 (31%), Gaps = 32/261 (12%)

Query: 191  NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             ++    + G +       R   +    FS +     + +   E  L V+ + T I    
Sbjct: 932  RNMVTTQQTGDSNTRTLDGRYGAVTAVAFSEDGS---FFSTGTEGSLTVWKVATWIPICT 988

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              + +   +     FS + K  L          ++  D+++    R              
Sbjct: 989  IFLPDSTGVAEEFSFSPDSKSVLAVY----GDTLHICDVETKTQIRTLAH---------- 1034

Query: 311  PDSSQIV---FESDREG------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            P+  +I    F+SD +G         ++V  +      +I   K  +      SP    +
Sbjct: 1035 PEKRKIACANFQSDSKGVVMVLRDATVHVWDAKTDKFDQIFAAKGETKSIIALSPNNKTL 1094

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A +          V    G   R+L   D   +  T++   ++L  S   DG     +  
Sbjct: 1095 AVSLLQNLIGIWDVSTGSGDSARVLKRHDEAFRDFTFAGDSKTLG-SVSTDGT----ICL 1149

Query: 421  IDLNGRNETLINTPAYASDPQ 441
             D+     T   +P + + P 
Sbjct: 1150 WDIESGICTRSFSPGWNNWPT 1170


>gi|296128013|ref|YP_003635263.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Cellulomonas flavigena DSM 20109]
 gi|296019828|gb|ADG73064.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Cellulomonas flavigena DSM 20109]
          Length = 704

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 67/178 (37%), Gaps = 14/178 (7%)

Query: 259 MILAPRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPD 312
              +P  S +G+  +        + +    + ++D+ +     L      ++S    SPD
Sbjct: 230 HQQSPALSPDGRTVVTPWNRAVARGEVRTHLVAIDVATGDRRVLVEDADGDLSRPVVSPD 289

Query: 313 SSQIVFESDREGKEQ------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             Q+V+  +            L+V+   G + +R++   +    DPVW P  D +     
Sbjct: 290 GQQVVYLRESISTPHRAPALELWVVPLAGGEPRRVAGHWDRWAVDPVWLPTSDALLVVAD 349

Query: 367 SGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +  +  ++    +  R+  +D+       SP GR+  ++ +      +    IDL
Sbjct: 350 DDGRSPVFHVELATDTVTRVTSDDAAFTDVRVSPDGRT-AYALRSSYAAPAAPVRIDL 406



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 58/162 (35%), Gaps = 5/162 (3%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           +++Q       D  + +   + +V  G ++  L  +D    + R L    D  L  P  S
Sbjct: 228 ELHQQSPALSPDGRTVVTPWNRAVARGEVRTHLVAIDVATGDRRVLVEDADGDLSRPVVS 287

Query: 221 PNQQKVAYATYDDEDILR-----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P+ Q+V Y         R     ++++        +  G++    + P +       L+ 
Sbjct: 288 PDGQQVVYLRESISTPHRAPALELWVVPLAGGEPRRVAGHWDRWAVDPVWLPTSDALLVV 347

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              D    ++ V+L ++   R+T+          SPD     
Sbjct: 348 ADDDGRSPVFHVELATDTVTRVTSDDAAFTDVRVSPDGRTAY 389



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 84/307 (27%), Gaps = 82/307 (26%)

Query: 220 SPNQQKVAYATYDDEDILRVYL-----MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+  ++  A    +     Y+     +D   +R  +R+        +  F+  G     
Sbjct: 33  SPDGSRLVTAVQTLDRKRTAYVTALWEVDPSGERPARRLTRSAKSESSAAFTPAGDLLFT 92

Query: 275 SVQKDEAMD---------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--- 322
           S + D             ++ +         + +          + D+  ++  SD    
Sbjct: 93  SARPDPDATEPDDEPPAALWLLPADGAEARVVADRRAGIGGVRTAKDAPTVLVVSDVLPS 152

Query: 323 -------------------------------------EGKEQLYVMQSNGSDQKRISQDK 345
                                                 G    +V   + +    ++ ++
Sbjct: 153 ASDPSDDDRRRKERKEAKVAAILHTGYPVRYWDHDLGPGAPHAFVATVSDNIAAPLAGER 212

Query: 346 EASY---------------FDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERL 385
           +                    P  SP G  +             +  +  +       R+
Sbjct: 213 DPRLDLSDVTPGARHELHQQSPALSPDGRTVVTPWNRAVARGEVRTHLVAIDVATGDRRV 272

Query: 386 LVE--DSNLQAPTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLINT--PAYA 437
           LVE  D +L  P  SP G+ +++ R+           +L+ + L G     +      +A
Sbjct: 273 LVEDADGDLSRPVVSPDGQQVVYLRESISTPHRAPALELWVVPLAGGEPRRVAGHWDRWA 332

Query: 438 SDPQWVG 444
            DP W+ 
Sbjct: 333 VDPVWLP 339


>gi|158317630|ref|YP_001510138.1| WD-40 repeat-containing serine/threonin protein kinase [Frankia sp.
           EAN1pec]
 gi|158113035|gb|ABW15232.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EAN1pec]
          Length = 865

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 83/249 (33%), Gaps = 16/249 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---FRSMIL 261
            +       +     SP+ + +A +  D+       L D      P+++       + +L
Sbjct: 525 TVLTGHTGSVLGLGISPDGRTIATSGADN----VARLWDVSDRTRPRQLSTIDAHGAWVL 580

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVF 318
              FS +GK    +V  D +  ++ +  ++   ++L++        + A++SPD   +  
Sbjct: 581 DAAFSPDGKLLA-TVGYDRSARLWDIGDRTR-PKQLSSMLAHNGYVLDAAFSPDGRMLA- 637

Query: 319 ESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGV 375
            S  +   +L+ +       +  +     +   +  +SP G L+A      +   + I  
Sbjct: 638 TSGYDNTARLWDITDPRQPHELAVLDRHTSWVNEVAFSPDGKLLATASADHTARLWDIAN 697

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            ++      +      +    +SP GR L             +      G   +      
Sbjct: 698 PRQPRPLAAITTHTDFVWTVAFSPDGRRLATGAYDGLVKIWDITDPTRPGATASFRADEK 757

Query: 436 YASDPQWVG 444
           +  D  +  
Sbjct: 758 WVFDVAYSP 766



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 84/257 (32%), Gaps = 20/257 (7%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V DR          +    + +  FSP+ + +A   YD        L D      PK++ 
Sbjct: 560 VSDRTRPRQLSTIDAHGAWVLDAAFSPDGKLLATVGYDR----SARLWDIGDRTRPKQLS 615

Query: 255 N---FRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +       +L   FS +G+    S       +   +   Q +    L          ++S
Sbjct: 616 SMLAHNGYVLDAAFSPDGRMLATSGYDNTARLWDITDPRQPHELAVLDRHTSWVNEVAFS 675

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSG 368
           PD   +   +  +   +L+ + +N    + ++     + F     +SP G  +A   + G
Sbjct: 676 PDGKLLA-TASADHTARLWDI-ANPRQPRPLAAITTHTDFVWTVAFSPDGRRLATGAYDG 733

Query: 369 EKFAIGVMKKD--GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 +      G+      ++  +    +SP GR+L        DT   L+ +   G 
Sbjct: 734 LVKIWDITDPTRPGATASFRADEKWVFDVAYSPDGRTLA---TAGWDTSVHLWDLTAPG- 789

Query: 427 NETLINTPAYASDPQWV 443
                     +    WV
Sbjct: 790 --QPAPAGRVSGHGDWV 804



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 83/232 (35%), Gaps = 13/232 (5%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            +  + +  FSP+ + +A + YD+   L   + D R       +    S +    FS +G
Sbjct: 620 HNGYVLDAAFSPDGRMLATSGYDNTARLW-DITDPRQPHELAVLDRHTSWVNEVAFSPDG 678

Query: 270 KRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           K    +   D    ++ +    Q      +T       + ++SPD  ++      +G  +
Sbjct: 679 KLLA-TASADHTARLWDIANPRQPRPLAAITTHTDFVWTVAFSPDGRRLA-TGAYDGLVK 736

Query: 328 LY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--- 383
           ++ +            +  E   FD  +SP G  +A   +      +  +   G      
Sbjct: 737 IWDITDPTRPGATASFRADEKWVFDVAYSPDGRTLATAGWD-TSVHLWDLTAPGQPAPAG 795

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           R+      +QA  ++P G S++       D  +++  ID  G        P+
Sbjct: 796 RVSGHGDWVQAVEFTPDGTSIVSVSD---DHTARISRIDDAGLVARACAGPS 844



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 79/229 (34%), Gaps = 33/229 (14%)

Query: 135 DRKQIIGKKFFSSPASW----RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           D + +    + ++   W     +  H ++      +      + + + F  +  +     
Sbjct: 632 DGRMLATSGYDNTARLWDITDPRQPHELA------VLDRHTSWVNEVAFSPDGKLLATAS 685

Query: 191 NSLCVMDRDGANIRYLTP-----SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                   D AN R   P     +    ++   FSP+ +++A   YD      V + D  
Sbjct: 686 ADHTARLWDIANPRQPRPLAAITTHTDFVWTVAFSPDGRRLATGAYDG----LVKIWDIT 741

Query: 246 IDRAPKRIGNFRS---MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNT 300
               P    +FR+    +    +S +G+    +   D ++ ++ +          R++  
Sbjct: 742 DPTRPGATASFRADEKWVFDVAYSPDGRTLA-TAGWDTSVHLWDLTAPGQPAPAGRVSGH 800

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-------SDQKRIS 342
                +  ++PD + IV  SD +   ++  +   G          ++I+
Sbjct: 801 GDWVQAVEFTPDGTSIVSVSD-DHTARISRIDDAGLVARACAGPSRQIT 848


>gi|83773904|dbj|BAE64029.1| unnamed protein product [Aspergillus oryzae]
          Length = 345

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 76/215 (35%), Gaps = 17/215 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  +      I      R   +    FSP+ ++VA    D +    V + D   +     
Sbjct: 132 MWDVSTSSEQIFQEPKGRVSRVNRVAFSPDGRQVAAGLADGK----VLIWDVSTNTQITT 187

Query: 253 IGNFRSMILAPRFSS-NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYS 310
            G     + A  FS  +GK  L+S  KD+ +  +  D ++   +   +     ++A ++S
Sbjct: 188 QG-HSGAVQALEFSPTSGK--LVSGSKDKTIRFW--DPRTGRKDNEISHPGGGLNAIAFS 242

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +   SD      + V  +    Q+R+         D  +S  G  +A     G  
Sbjct: 243 PDGKSLASGSD---DSSVRVWNAETLAQRRLLPAHTGPINDLAFSADGRQLASVSDDGT- 298

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             + +            +    +A  +SP G+ L 
Sbjct: 299 --LRIWSLADDYVLSSHQQRKAEAVAFSPDGKYLA 331



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 82/232 (35%), Gaps = 21/232 (9%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN--SRILFVSESVVSGIIKNS 192
           D  +++   +  +   W      +S    Q     KG  +  +R+ F  +          
Sbjct: 117 DGTKVLCGTYEGAVKMW-----DVSTSSEQIFQEPKGRVSRVNRVAFSPDGRQVAAGLAD 171

Query: 193 LCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
             V+  D   N +  T      +    FSP   K+   + D      +   D R  R   
Sbjct: 172 GKVLIWDVSTNTQITTQGHSGAVQALEFSPTSGKLVSGSKDK----TIRFWDPRTGRKDN 227

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYS 310
            I +    + A  FS +GK    S   D ++ ++  + ++ A  R L          ++S
Sbjct: 228 EISHPGGGLNAIAFSPDGKSLA-SGSDDSSVRVW--NAETLAQRRLLPAHTGPINDLAFS 284

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            D  Q+   SD +G  +++ +  +      +S  ++       +SP G  +A
Sbjct: 285 ADGRQLASVSD-DGTLRIWSLADDY----VLSSHQQRKAEAVAFSPDGKYLA 331



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 86/246 (34%), Gaps = 20/246 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           + T +   +      SP+  KV   TY  E  ++++ + T  ++  +      S +    
Sbjct: 100 WETGAGAGMPMSVALSPDGTKVLCGTY--EGAVKMWDVSTSSEQIFQEPKGRVSRVNRVA 157

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G++   +   D  + I+ V   +  T +         +  +SP S ++V  S    
Sbjct: 158 FSPDGRQVA-AGLADGKVLIWDVSTNTQITTQ--GHSGAVQALEFSPTSGKLVSGSK--- 211

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + +         +               +SP G  +A      +  ++ V   +   +R
Sbjct: 212 DKTIRFWDPRTGRKDNEISHPGGGLNAIAFSPDGKSLA---SGSDDSSVRVWNAETLAQR 268

Query: 385 LL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID----LNGRNETLINTPAYAS 438
            L       +    +S  GR L        D   +++S+     L+   +      A++ 
Sbjct: 269 RLLPAHTGPINDLAFSADGRQLASVSD---DGTLRIWSLADDYVLSSHQQRKAEAVAFSP 325

Query: 439 DPQWVG 444
           D +++ 
Sbjct: 326 DGKYLA 331



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 71/189 (37%), Gaps = 8/189 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP  +++A      + ++ V+ M TR   A    G    M ++   S +G + L    
Sbjct: 68  AFSPKNERMAVGELSPQRVV-VWDMKTRQPLAGWETGAGAGMPMSVALSPDGTKVL-CGT 125

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            + A+ ++ V   S    +        ++  ++SPD  Q+      +GK  ++ +    +
Sbjct: 126 YEGAVKMWDVSTSSEQIFQEPKGRVSRVNRVAFSPDGRQVA-AGLADGKVLIWDVS---T 181

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           + +  +Q    +     +SP    +  +    +       +       +      L A  
Sbjct: 182 NTQITTQGHSGAVQALEFSPTSGKLV-SGSKDKTIRFWDPRTGRKDNEISHPGGGLNAIA 240

Query: 397 WSPSGRSLI 405
           +SP G+SL 
Sbjct: 241 FSPDGKSLA 249



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 8/115 (6%)

Query: 168 GEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
              G   + I F  +  S+ SG   +S+ V + +    R L P+    + +  FS + ++
Sbjct: 230 SHPGGGLNAIAFSPDGKSLASGSDDSSVRVWNAETLAQRRLLPAHTGPINDLAFSADGRQ 289

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           +A  + D    +     D  +    +R         A  FS +GK     V  + 
Sbjct: 290 LASVSDDGTLRIWSLADDYVLSSHQQRKAE------AVAFSPDGKYLASVVALEG 338


>gi|145475009|ref|XP_001423527.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124390587|emb|CAK56129.1| unnamed protein product [Paramecium tetraurelia]
          Length = 481

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 68/198 (34%), Gaps = 14/198 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    S+   D      +        I++   FSP+   +A  + D      ++L D +
Sbjct: 60  SGSADKSIRFWDIKTGQQKCKLDGHLGIVYSINFSPDGNILASGSDDK----SIHLWDVK 115

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
             +   ++      + +  FS +      S   D +++++  D+++   + +L   L   
Sbjct: 116 TGQQIAKLYGHSGWVYSVNFSPDSTTLA-SGSDDNSINLW--DVKTGLQKDKLVGHLERV 172

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPD + +   S     + + +       QK              +SP G  +A  
Sbjct: 173 WSVNFSPDGTTLASGS---ADKSIRLWDVKTRQQKAKLDGHSHCVISVNFSPDGATLASG 229

Query: 365 KFSGEKFAIGVMKKDGSQ 382
                   I +      Q
Sbjct: 230 SVDNT---IRLWDIKTRQ 244



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 76/198 (38%), Gaps = 19/198 (9%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYS 310
           ++      +++  FS  G     S   D+++  +  D+++   + +L   L I  S ++S
Sbjct: 38  KLDGHSETVMSVNFSPTGNILA-SGSADKSIRFW--DIKTGQQKCKLDGHLGIVYSINFS 94

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD + +   SD    + +++       Q           +   +SP    +A +      
Sbjct: 95  PDGNILASGSD---DKSIHLWDVKTGQQIAKLYGHSGWVYSVNFSPDSTTLA-SGSDDNS 150

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-------DL 423
             +  +K    +++L+     + +  +SP G +L        D   +L+ +        L
Sbjct: 151 INLWDVKTGLQKDKLVGHLERVWSVNFSPDGTTLA---SGSADKSIRLWDVKTRQQKAKL 207

Query: 424 NGRNETLINTPAYASDPQ 441
           +G +  +I+   ++ D  
Sbjct: 208 DGHSHCVISVN-FSPDGA 224



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 32/180 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G ++  G D   +   LWDVK  +QI                H  S  +Y          
Sbjct: 97  GNILASGSDDKSIH--LWDVKTGQQIAKL-----------YGH--SGWVYSVNFSPD--- 138

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                  S ++ SG   NS+ + D      +       + ++   FSP+   +A  + D 
Sbjct: 139 -------STTLASGSDDNSINLWDVKTGLQKDKLVGHLERVWSVNFSPDGTTLASGSADK 191

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L D +  +   ++      +++  FS +G     S   D  + ++  D+++  
Sbjct: 192 ----SIRLWDVKTRQQKAKLDGHSHCVISVNFSPDGATLA-SGSVDNTIRLW--DIKTRQ 244


>gi|20090157|ref|NP_616232.1| cell surface protein [Methanosarcina acetivorans C2A]
 gi|19915141|gb|AAM04712.1| cell surface protein [Methanosarcina acetivorans C2A]
          Length = 688

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 88/238 (36%), Gaps = 32/238 (13%)

Query: 220 SPN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGKRALISV 276
           SP+    ++ +   D+     +Y+ +       + I N         F   +G R +   
Sbjct: 74  SPDIYGDRIVWVRGDN-----IYMYNISSSAEIQ-ITNESLNEGQKEFLGISGDRIVWED 127

Query: 277 QKDEA-----MDIYSVDLQSNATERLTNTLFINISASYSPD----SSQIVFE----SDRE 323
            +D        +IY  DL +++  R+T+      + S++        +IV+     S+  
Sbjct: 128 DRDRNESNRNWNIYVYDLSTSSETRITSVPA--TTGSFATTVSIYGDRIVWVGRNDSETW 185

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               +Y+   + S + R++    A          GD I +      K  I +     S E
Sbjct: 186 RNTDIYMYDFSSSTETRVTTSGSAGGPKIY----GDRIVYMDRRSGKSEIYLYNISTSAE 241

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDP 440
             +  D    + + +  G  +++   ++G+    +Y  DL+   ET I T  +   +P
Sbjct: 242 TQVTTDGLSHSIS-AIYGDRIVWEDNRNGNW--DIYMYDLSTSMETQITTDKSDQREP 296



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 58/180 (32%), Gaps = 13/180 (7%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +  RI++V  +         + + D   +    +T S       P+      ++ Y   
Sbjct: 169 IYGDRIVWVGRNDSETWRNTDIYMYDFSSSTETRVTTSGS--AGGPKIY--GDRIVYMDR 224

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                  +YL +       +   +  S  ++  +   G R +    ++   DIY  DL +
Sbjct: 225 RSGKS-EIYLYNISTSAETQVTTDGLSHSISAIY---GDRIVWEDNRNGNWDIYMYDLST 280

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY---VMQSNGSDQKRISQDKEAS 348
           +   ++T                +IV++  R      Y   +   + SD+  +      +
Sbjct: 281 SMETQITTDKSDQREPDIY--GDRIVWQDYRNTDPNEYYCEIYMYDFSDKSVVPFASFTN 338


>gi|256838977|ref|ZP_05544487.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739896|gb|EEU53220.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 492

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 73/470 (15%), Positives = 142/470 (30%), Gaps = 109/470 (23%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIG---GFFPTSIHAFVKVATN-SANYSPVSIAFTKFV 56
           M  + +      + + L  L+V           S++  + +  +      PV+IA   F 
Sbjct: 1   MERQTYTNTNRYLFLFLIALMVSCSKNDIQIAKSLNKEITIYPDYKDVTIPVNIAPLNFS 60

Query: 57  SIDEL-------GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
             D         G K    V  D     +F  I Q                + W +L   
Sbjct: 61  IADSSEHCLIIKGEKTQLQVYSD---EGLFE-IPQ----------------KRWKAL--- 97

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
                 + +   +++ +          K+I G+    +P        +I   I   +   
Sbjct: 98  ------LKENAGNQIELTI-------AKRIQGEWNAYTPFHMDIANDSIDKYIAYRLLAL 144

Query: 170 KGDFNSRILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             D  +R+     ++ +          + D +  N    +      +    F    +   
Sbjct: 145 SNDMWNRMGIYQRNLENYDQSVIYENSLTDYNCVNCHTFSSGNPDKMI---FHMRGKHAG 201

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--------- 278
               D + I ++        + P+ + NF  M     +  NG     +V           
Sbjct: 202 SVLIDGKKITKLN------TKTPETVSNFVYMY----WHPNGNYLAATVCDTYQNFFINN 251

Query: 279 -------DEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESD------- 321
                  D   DI   D++ N     E L +     I  ++SPD   + F S        
Sbjct: 252 PNTLEVLDHNSDIVIYDVKKNEVFSCEALNSKDAWQIFPAFSPDGKSLYFSSTAAVDSIS 311

Query: 322 ---REGKEQLYVMQSNG-----SDQKRISQDKEASY---FDPVWSPQGDLIAFTKFSGEK 370
              R+    L  +  +        Q     +  A++     P  SP G  +AFT      
Sbjct: 312 KNFRQMTYSLCRVDFDPETRTLGQQVDTLYNGRANHKSVSFPRISPDGKYLAFTLQEYGG 371

Query: 371 F-------AIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKK 410
           F        + +++    +   L E ++ +     +WS + R L+FS ++
Sbjct: 372 FSVWHKDAELYMIRLSDGKTYPLSEANSAEGESYHSWSHNNRWLVFSSRR 421



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 68/213 (31%), Gaps = 56/213 (26%)

Query: 289 LQSNATERL-TNTL---FINISASYSPDSSQIV----------FESDR------EGKEQL 328
           +      +L T T       +   + P+ + +           F ++       +    +
Sbjct: 205 IDGKKITKLNTKTPETVSNFVYMYWHPNGNYLAATVCDTYQNFFINNPNTLEVLDHNSDI 264

Query: 329 YVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTK----------FSGEKFAIGVM 376
            +     ++         K+A    P +SP G  + F+           F    +++  +
Sbjct: 265 VIYDVKKNEVFSCEALNSKDAWQIFPAFSPDGKSLYFSSTAAVDSISKNFRQMTYSLCRV 324

Query: 377 KKD------GSQERLLVEDSNLQ----APTWSPSGRSLIFSRKKDGDTG-----SKLYSI 421
             D      G Q   L            P  SP G+ L F+ ++ G        ++LY I
Sbjct: 325 DFDPETRTLGQQVDTLYNGRANHKSVSFPRISPDGKYLAFTLQEYGGFSVWHKDAELYMI 384

Query: 422 DL-NGRNETLINTP--------AYASDPQWVGF 445
            L +G+   L            +++ + +W+ F
Sbjct: 385 RLSDGKTYPLSEANSAEGESYHSWSHNNRWLVF 417


>gi|150010156|ref|YP_001304899.1| hypothetical protein BDI_3579 [Parabacteroides distasonis ATCC
           8503]
 gi|255012584|ref|ZP_05284710.1| hypothetical protein B2_01654 [Bacteroides sp. 2_1_7]
 gi|149938580|gb|ABR45277.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 492

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 73/470 (15%), Positives = 142/470 (30%), Gaps = 109/470 (23%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIG---GFFPTSIHAFVKVATN-SANYSPVSIAFTKFV 56
           M  + +      + + L  L+V           S++  + +  +      PV+IA   F 
Sbjct: 1   MERQTYTNTNRYLFLFLIALMVSCSKNDIQIAKSLNKEITIYPDYKDVTIPVNIAPLNFS 60

Query: 57  SIDEL-------GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
             D         G K    V  D     +F  I Q                + W +L   
Sbjct: 61  IADSSEHCLIIKGEKTQLQVYSD---EGLFE-IPQ----------------KRWKAL--- 97

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
                 + +   +++ +          K+I G+    +P        +I   I   +   
Sbjct: 98  ------LKENAGNQIELTI-------AKRIQGEWNAYTPFHMDIANDSIDKYIAYRLLAL 144

Query: 170 KGDFNSRILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             D  +R+     ++ +          + D +  N    +      +    F    +   
Sbjct: 145 SNDMWNRMGIYQRNLENYDQSVIYENSLTDYNCVNCHTFSSGNPDKMI---FHMRGKHAG 201

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--------- 278
               D + I ++        + P+ + NF  M     +  NG     +V           
Sbjct: 202 SVLIDGKKITKLN------TKTPETVSNFVYMY----WHPNGNYLAATVCDTYQNFFINN 251

Query: 279 -------DEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESD------- 321
                  D   DI   D++ N     E L +     I  ++SPD   + F S        
Sbjct: 252 PNTLEVLDHNSDIVIYDVKKNEVFSCEALNSKDAWQIFPAFSPDGKSLYFSSTAAVDSIS 311

Query: 322 ---REGKEQLYVMQSNG-----SDQKRISQDKEASY---FDPVWSPQGDLIAFTKFSGEK 370
              R+    L  +  +        Q     +  A++     P  SP G  +AFT      
Sbjct: 312 KNFRQMTYSLCRVDFDPETRTLGQQVDTLYNGRANHKSVSFPRISPDGKYLAFTLQEYGG 371

Query: 371 F-------AIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKK 410
           F        + +++    +   L E ++ +     +WS + R L+FS ++
Sbjct: 372 FGVWHKDAELYMIRLSDGKTYPLSEANSAEGESYHSWSHNNRWLVFSSRR 421



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 69/213 (32%), Gaps = 56/213 (26%)

Query: 289 LQSNATERL-TNTL---FINISASYSPDSSQIV----------FESDR------EGKEQL 328
           +      +L T T       +   + P+ + +           F ++       +    +
Sbjct: 205 IDGKKITKLNTKTPETVSNFVYMYWHPNGNYLAATVCDTYQNFFINNPNTLEVLDHNSDI 264

Query: 329 YVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTK----------FSGEKFAIGVM 376
            +     ++         K+A    P +SP G  + F+           F    +++  +
Sbjct: 265 VIYDVKKNEVFSCEALNSKDAWQIFPAFSPDGKSLYFSSTAAVDSISKNFRQMTYSLCRV 324

Query: 377 KKD------GSQERLLVEDSNLQ----APTWSPSGRSLIFSRKKDGDTG-----SKLYSI 421
             D      G Q   L            P  SP G+ L F+ ++ G  G     ++LY I
Sbjct: 325 DFDPETRTLGQQVDTLYNGRANHKSVSFPRISPDGKYLAFTLQEYGGFGVWHKDAELYMI 384

Query: 422 DL-NGRNETLINTP--------AYASDPQWVGF 445
            L +G+   L            +++ + +W+ F
Sbjct: 385 RLSDGKTYPLSEANSAEGESYHSWSHNNRWLVF 417


>gi|86141713|ref|ZP_01060237.1| putative peptidase [Leeuwenhoekiella blandensis MED217]
 gi|85831276|gb|EAQ49732.1| putative peptidase [Leeuwenhoekiella blandensis MED217]
          Length = 790

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 65/172 (37%), Gaps = 19/172 (11%)

Query: 265 FSSNGKRALISVQKDEAMDIYS--VDLQSNATERL--------TNTLFINISAS-----Y 309
           FS +G +A+++V+  +  D +   +DL+  + E L             I  S       +
Sbjct: 337 FSEDGSKAIVNVRSKDNKDRWIALLDLEDGSLETLDRQRDEAWIAGPGIGWSFGGGTLGW 396

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFS 367
            PD+  I F+S+  G   LY++      +K ++ + E   FDP  S       +  ++  
Sbjct: 397 LPDNKHIYFQSEASGYSHLYLLDVTTGTKKALT-EGEYEVFDPFLSNDKKSWFLTTSEVG 455

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             +     M   G   + L         + SP  + +   R    +   +LY
Sbjct: 456 PGERHFYKMPVMGGSMQKLTNLPGNNEVSLSPDEKYMA-IRNSFSNKPWELY 506



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 71/227 (31%), Gaps = 25/227 (11%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK-VAYATYDDEDILRVYLMDTRIDR- 248
             L    +D  +  +    R+ I+ +  FS +  K +      D     + L+D      
Sbjct: 309 TDLPDYTKDYPDKEWEEKEREVIVSQAIFSEDGSKAIVNVRSKDNKDRWIALLDLEDGSL 368

Query: 249 -------------APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                         P    +F    L   +  + K      +      +Y +D+ +   +
Sbjct: 369 ETLDRQRDEAWIAGPGIGWSFGGGTLG--WLPDNKHIYFQSEASGYSHLYLLDVTTGTKK 426

Query: 296 RLTNTLFINISASYSPDSSQIVF--ESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            LT   +       S D  +  F   S+   G+   Y M   G   ++++     +  + 
Sbjct: 427 ALTEGEYEVFDPFLSND-KKSWFLTTSEVGPGERHFYKMPVMGGSMQKLTNLPGNN--EV 483

Query: 353 VWSPQGDLIAFT-KFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTW 397
             SP    +A    FS + + +   K   S   + L    +    ++
Sbjct: 484 SLSPDEKYMAIRNSFSNKPWELYFKKTGSSKDAQQLTSGQSEAFQSY 530


>gi|293393734|ref|ZP_06638042.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
 gi|291423778|gb|EFE96999.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
          Length = 443

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/158 (23%), Positives = 57/158 (36%), Gaps = 20/158 (12%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
            +        Q     RLT T       +      +   SPD SQI F   D  G  QL+
Sbjct: 287 GSETTLPAPPQGVRQRRLTQTGDRRYPGLATVPRHWLRSSPDGSQIAFLMKDDAGVVQLW 346

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +  NG   ++IS  K        W PQG  IA    +    ++ +          L + 
Sbjct: 347 CVSPNGGAPRQISVGKHDIQSAFSWHPQGRQIALVCDN----SVMLCDVADGGMHRLTQR 402

Query: 390 SNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           S       A  +SP G  + F R+  G   ++++ +D 
Sbjct: 403 SQRPPSGDAVVFSPDGTRVAFMREVAG--FNQIFVVDT 438



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 15/146 (10%)

Query: 200 GANIRYLTPSRD----QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           G   R LT + D     +   PR     SP+  ++A+   DD  +++++ +        +
Sbjct: 298 GVRQRRLTQTGDRRYPGLATVPRHWLRSSPDGSQIAFLMKDDAGVVQLWCVSPNGGAPRQ 357

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---S 308
                  +  A  +   G++  +         +   D+      RLT       S     
Sbjct: 358 ISVGKHDIQSAFSWHPQGRQIALVCDNS----VMLCDVADGGMHRLTQRSQRPPSGDAVV 413

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSN 334
           +SPD +++ F  +  G  Q++V+ + 
Sbjct: 414 FSPDGTRVAFMREVAGFNQIFVVDTA 439



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 3/99 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +  +G   R ++  +  I     + P  +++A     D  ++   + D  + R  +
Sbjct: 344 QLWCVSPNGGAPRQISVGKHDIQSAFSWHPQGRQIALV--CDNSVMLCDVADGGMHRLTQ 401

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           R     S   A  FS +G R     +      I+ VD  
Sbjct: 402 RSQRPPSGD-AVVFSPDGTRVAFMREVAGFNQIFVVDTA 439


>gi|73668994|ref|YP_305009.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
 gi|72396156|gb|AAZ70429.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
          Length = 658

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 71/199 (35%), Gaps = 17/199 (8%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEAMDIYSVDLQSNAT 294
             +++  T    +P  I   R        + +  G + +    ++   DIY  DL +   
Sbjct: 20  FLIFVSSTASAASPSAITETRITNHGTASNPDIYGDKIVWQDNRNGNWDIYIFDLSTKTE 79

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
              T      I+ +   +   +V+E +R G   +YV   +   Q RIS+  EA   +P  
Sbjct: 80  IH-TTNKTDQINPAIYEN--LVVWEDERNGGHDIYVEDLSTKIQTRISKSGEA--HNPAI 134

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
              G+ I + + S     I +      +E  +        P     G  + +S       
Sbjct: 135 --YGNRIVWQEESNGNSNIYMYDISTKKETQITTSGTAYKPDIH--GDKIAWS------D 184

Query: 415 GSKLYSIDLNGRNETLINT 433
              +   DL+ + ET I T
Sbjct: 185 VEYIIVYDLSNKKETKIPT 203



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 22/160 (13%)

Query: 293 ATERLTNTLFINISASYSPD--SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              R+TN    +     +PD    +IV++ +R G   +Y+     S +  I    +    
Sbjct: 37  TETRITNHGTAS-----NPDIYGDKIVWQDNRNGNWDIYIFDL--STKTEIHTTNKTDQI 89

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           +P      +L+ +         I V       +  + +      P     G  +++  + 
Sbjct: 90  NPAI--YENLVVWEDERNGGHDIYVEDLSTKIQTRISKSGEAHNPAI--YGNRIVWQEES 145

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDP-------QWV 443
           +G   S +Y  D++ + ET I T   A  P        W 
Sbjct: 146 NG--NSNIYMYDISTKKETQITTSGTAYKPDIHGDKIAWS 183


>gi|307354076|ref|YP_003895127.1| hypothetical protein Mpet_1938 [Methanoplanus petrolearius DSM
           11571]
 gi|307157309|gb|ADN36689.1| hypothetical protein Mpet_1938 [Methanoplanus petrolearius DSM
           11571]
          Length = 457

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 92/286 (32%), Gaps = 50/286 (17%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-------ATYDDEDILRVYLMDTR 245
           L +M  DG+    +  S   I   P +SP    +A           D        +    
Sbjct: 99  LFLMKSDGSGKHQI--SNLNIFGVPLWSPKGDAIAIKGLEKSGTPMDGFRYSNEGIWMVS 156

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL---- 301
           +D   + +    S   A  +S +G+     +  +E + +  + + ++++ ++        
Sbjct: 157 VDTNDEYLLVNSSDAWAAAWSPDGRFLAYILYNEENITVNIISVDNSSSSQIYTLPNLNG 216

Query: 302 --------------FINISASYSPDSSQIVFESDRE---GKEQLYVMQS--NGSDQKRIS 342
                          +  +  +S D   I F S  +   G  Q  ++    +GS   RI 
Sbjct: 217 FETYRNILCSIRKAGLEDTIRWSDDGESISFISGEDLEGGSGQFLLVDVGIDGSVISRIP 276

Query: 343 QDKEASY--FDPVWSPQGDLIAFTK---FSGEKFAIGVMKKDGSQERLLVE---DSNLQA 394
            +   SY   +  W P  +  A+     +   +  + ++   G  E  + +    S   +
Sbjct: 277 VNISNSYRISEFAWKPSSNRFAYISNFTYHPYENHLLIIGPAGETEVPMYDYNYSSRYTS 336

Query: 395 PTWSP--SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             WS    G    F     GD    ++  D +G   T +       
Sbjct: 337 LQWSDAVDG----FIFTDQGD----IWKADESGNELTRLTMNGSVR 374



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 31/155 (20%)

Query: 310 SPDSSQIVFESDREGK----------------EQLYVMQSNGSDQKRISQDKEASYFDPV 353
           SPD ++I   S  E K                  L++M+S+GS + +IS      +  P+
Sbjct: 66  SPDGTEIA-LSCMEWKEPCSCSYSCLGCAEDDPHLFLMKSDGSGKHQISNL--NIFGVPL 122

Query: 354 WSPQGDLIA----------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
           WSP+GD IA             F      I ++  D + E LLV  S+  A  WSP GR 
Sbjct: 123 WSPKGDAIAIKGLEKSGTPMDGFRYSNEGIWMVSVDTNDEYLLVNSSDAWAAAWSPDGRF 182

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNE--TLINTPAY 436
           L +    + +    + S+D +  ++  TL N   +
Sbjct: 183 LAYILYNEENITVNIISVDNSSSSQIYTLPNLNGF 217



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 96/287 (33%), Gaps = 39/287 (13%)

Query: 156 HTISDDIYQS--ITGEKGDFNSRILFVSESVVSGIIKNS---LCVMDRDGANIRYLTPSR 210
           H IS+       +   KGD  +              + S   + ++  D  +   L  S 
Sbjct: 110 HQISNLNIFGVPLWSPKGDAIAIKGLEKSGTPMDGFRYSNEGIWMVSVDTNDEYLLVNSS 169

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMIL-------- 261
           D   +   +SP+ + +AY  Y++E+I + +  +D         + N              
Sbjct: 170 D--AWAAAWSPDGRFLAYILYNEENITVNIISVDNSSSSQIYTLPNLNGFETYRNILCSI 227

Query: 262 -------APRFSSNGKRALISVQKD---EAMDIYSVD--LQSNATERLTNTLFINI---S 306
                    R+S +G+       +D    +     VD  +  +   R+   +  +     
Sbjct: 228 RKAGLEDTIRWSDDGESISFISGEDLEGGSGQFLLVDVGIDGSVISRIPVNISNSYRISE 287

Query: 307 ASYSPDSSQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQGDLIA 362
            ++ P S++  + S+         L ++   G  +  +     +S Y    WS   D   
Sbjct: 288 FAWKPSSNRFAYISNFTYHPYENHLLIIGPAGETEVPMYDYNYSSRYTSLQWSDAVDGFI 347

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           FT        I    + G++   L  + +++  T  P    +I+S  
Sbjct: 348 FTDQGD----IWKADESGNELTRLTMNGSVRFVTQLPGSEKIIYSES 390



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 76/238 (31%), Gaps = 49/238 (20%)

Query: 220 SPNQQKVAYATYDDEDILR------------VYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           SP+  ++A +  + ++                +L   + D + K   +  ++   P +S 
Sbjct: 66  SPDGTEIALSCMEWKEPCSCSYSCLGCAEDDPHLFLMKSDGSGKHQISNLNIFGVPLWSP 125

Query: 268 NGKRALI-SVQKDEAMD---------IYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            G    I  ++K              I+ V + +N    L N+     +A++SPD   + 
Sbjct: 126 KGDAIAIKGLEKSGTPMDGFRYSNEGIWMVSVDTNDEYLLVNS-SDAWAAAWSPDGRFLA 184

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-----------------VWSPQGDL 360
           +    E    + ++  + S   +I      + F+                   WS  G+ 
Sbjct: 185 YILYNEENITVNIISVDNSSSSQIYTLPNLNGFETYRNILCSIRKAGLEDTIRWSDDGES 244

Query: 361 IAFTKFSG-----EKFAIGVMKKDGSQ----ERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           I+F           +F +  +  DGS        +     +    W PS     +   
Sbjct: 245 ISFISGEDLEGGSGQFLLVDVGIDGSVISRIPVNISNSYRISEFAWKPSSNRFAYISN 302



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 24/127 (18%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKF---------------SGEKFAIGVMKKDGSQERL 385
           ++   E S    V SP G  IA +                 + +   + +MK DGS +  
Sbjct: 53  LTFCGE-SCNYAVGSPDGTEIALSCMEWKEPCSCSYSCLGCAEDDPHLFLMKSDGSGKHQ 111

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDT--------GSKLYSIDLNGRNETLINTPAYA 437
           +   +    P WSP G ++     +   T           ++ + ++  +E L+   + A
Sbjct: 112 ISNLNIFGVPLWSPKGDAIAIKGLEKSGTPMDGFRYSNEGIWMVSVDTNDEYLLVNSSDA 171

Query: 438 SDPQWVG 444
               W  
Sbjct: 172 WAAAWSP 178


>gi|37522224|ref|NP_925601.1| WD repeat-containing protein [Gloeobacter violaceus PCC 7421]
 gi|35213224|dbj|BAC90596.1| WD-repeat protein [Gloeobacter violaceus PCC 7421]
          Length = 1193

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 90/300 (30%), Gaps = 58/300 (19%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             + SG    ++ + +     +      R   L    FSP+ + VA           + L+
Sbjct: 845  RLASGSDDQAIRLWEVSTGRLLRTICGRINWLTSGTFSPDGRFVA-----AGGEYDLVLL 899

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
              RI     R+      + A  FS + +    S   D  + ++S+               
Sbjct: 900  WDRIADRQWRLVGHTGAVGAVVFSPDREHLA-SASADGTIRLWSL-TSHRQVAIFEGHTA 957

Query: 303  INISASYSPDSSQIV---FESD------------REGKEQLY------------------ 329
                 ++SPD + +V   ++S             R G EQL                   
Sbjct: 958  AIRGLAFSPDGALLVSCGYDSGVRVWQVSTGHLLRSGGEQLVDSVAVASDGKRLAVGLID 1017

Query: 330  ----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-- 383
                +      ++ +I        +   +SP G ++A     G    + +      +   
Sbjct: 1018 DRAEIWDLETFEKLQIFPGHREWAWQVAFSPDGRILASGSHDGT---VRLWDSAEGKLLH 1074

Query: 384  RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             L      +    +SP G+ L        D  + ++ +   GR        A+ +   WV
Sbjct: 1075 TLEAHRGWVWRVAFSPDGQFLA---SAGTDAKAAVWEV-ATGRRLR-----AWQAHNSWV 1125



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 95/310 (30%), Gaps = 36/310 (11%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQI----------IGKKFF--------SSPASWRKIAHTI 158
             +          RLW+V   + +              F                 +   I
Sbjct: 844  TRLASGSDDQAIRLWEVSTGRLLRTICGRINWLTSGTFSPDGRFVAAGGEYDLVLLWDRI 903

Query: 159  SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            +D  ++ +               E + S     ++ +          +       +    
Sbjct: 904  ADRQWRLVGHTGAVGAVVFSPDREHLASASADGTIRLWSLTSHRQVAIFEGHTAAIRGLA 963

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+   +    YD      V +         +       ++ +   +S+GKR  + +  
Sbjct: 964  FSPDGALLVSCGYDSG----VRVWQVSTGHLLR--SGGEQLVDSVAVASDGKRLAVGLI- 1016

Query: 279  DEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+  +I+  DL++    ++           ++SPD   +   S  +G  +L+   S    
Sbjct: 1017 DDRAEIW--DLETFEKLQIFPGHREWAWQVAFSPDGRILASGSH-DGTVRLW--DSAEGK 1071

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLL-VEDSNLQAP 395
                 +      +   +SP G  +A    +G      V +   G + R     +S + + 
Sbjct: 1072 LLHTLEAHRGWVWRVAFSPDGQFLA---SAGTDAKAAVWEVATGRRLRAWQAHNSWVISV 1128

Query: 396  TWSPSGRSLI 405
             +SP GR L+
Sbjct: 1129 AFSPDGRILL 1138



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/350 (13%), Positives = 106/350 (30%), Gaps = 81/350 (23%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            ++      +    + WDV+  + +                H +      + T      +
Sbjct: 632 TLVSAAGRGVDAAIQFWDVESGRCLRS--------------HKV-----HTGTIPTLAIS 672

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +   +++     G I   L     DG     +     + ++   FSP+ + +  A  D  
Sbjct: 673 ADGEYLASGGADGQIH--LW-RRADGYGNSCVLVGLSRTIYGLAFSPDGRWLVSAGAD-- 727

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--------------------- 273
               + + D       + +G     I +  FS +G                         
Sbjct: 728 --CLLRVWDVESSVCLRVLGGHTDWIKSVAFSPSGHLVASAGIDRTVRLWDPAGGECVAV 785

Query: 274 -------------------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDS 313
                               S   D ++  +  D+ +    RL      N+ A + SP  
Sbjct: 786 LEGHTGPTLSVLFIDDTTVASGSTDRSIRFW--DVATGRCTRLIAAHDNNVMALALSPCG 843

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +++   SD    + + + + +     R    +        +SP G  +A    +G ++ +
Sbjct: 844 TRLASGSD---DQAIRLWEVSTGRLLRTICGRINWLTSGTFSPDGRFVA----AGGEYDL 896

Query: 374 GVM--KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            ++  +    Q RL+     + A  +SP    L        D   +L+S+
Sbjct: 897 VLLWDRIADRQWRLVGHTGAVGAVVFSPDREHLA---SASADGTIRLWSL 943



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 60/391 (15%), Positives = 123/391 (31%), Gaps = 67/391 (17%)

Query: 75   RSDVFNLISQDSFKQKITNPDSIPRFQDWNSL---GAQVLVTG------RVIKEGKDRLR 125
             +     ++  +  + + +  +  +   W      G   ++ G       +      R  
Sbjct: 662  HTGTIPTLAISADGEYLASGGADGQIHLWRRADGYGNSCVLVGLSRTIYGLAFSPDGRWL 721

Query: 126  VE------FRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            V        R+WDV+     + + G                  D I        G     
Sbjct: 722  VSAGADCLLRVWDVESSVCLRVLGGHT----------------DWIKSVAFSPSG----- 760

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                   V S  I  ++ + D  G     +            F  +   VA  + D    
Sbjct: 761  -----HLVASAGIDRTVRLWDPAGGECVAVLEGHTGPTLSVLFI-DDTTVASGSTDR--- 811

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              +   D    R  + I    + ++A   S  G R   S   D+A+ ++ V         
Sbjct: 812  -SIRFWDVATGRCTRLIAAHDNNVMALALSPCGTRLA-SGSDDQAIRLWEVS-TGRLLRT 868

Query: 297  LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            +   +    S ++SPD   +       G+  L ++    +D++        +    V+SP
Sbjct: 869  ICGRINWLTSGTFSPDGRFVA----AGGEYDLVLLWDRIADRQWRLVGHTGAVGAVVFSP 924

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDT 414
              + +A     G    I +      ++  + E     ++   +SP G  L+       D+
Sbjct: 925  DREHLASASADGT---IRLWSLTSHRQVAIFEGHTAAIRGLAFSPDGALLV---SCGYDS 978

Query: 415  GSKLYSID----LNGRNETLINTPAYASDPQ 441
            G +++ +     L    E L+++ A ASD +
Sbjct: 979  GVRVWQVSTGHLLRSGGEQLVDSVAVASDGK 1009



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 76/220 (34%), Gaps = 13/220 (5%)

Query: 190 KNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           +  LC +D  GA++   +      ++    F P    +A      +   ++YL  T   R
Sbjct: 554 ERRLCRVDFTGADLNGSVFARVFALIVVLAFHPRGHLLA----CGDSTGKIYLWQTDNGR 609

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISA 307
                      +    F+  G   + +  +     I   D++S               + 
Sbjct: 610 QVACFEAQPEAVWGLVFTPKGDTLVSAAGRGVDAAIQFWDVESGRCLRSHKVHTGTIPTL 669

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + S D   +      +G+  L+  +++G     +      + +   +SP G  +     +
Sbjct: 670 AISADGEYLA-SGGADGQIHLWR-RADGYGNSCVLVGLSRTIYGLAFSPDGRWLV---SA 724

Query: 368 GEKFAIGVMKKDGSQ-ERLLVEDSNL-QAPTWSPSGRSLI 405
           G    + V   + S   R+L   ++  ++  +SPSG  + 
Sbjct: 725 GADCLLRVWDVESSVCLRVLGGHTDWIKSVAFSPSGHLVA 764



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 67/198 (33%), Gaps = 30/198 (15%)

Query: 119  EGKDRLRVEF------RLWDVKDRKQI------IGKKFFSSPASWRKIAHTISD------ 160
                 L V        R+W V     +      +      +    R     I D      
Sbjct: 965  SPDGALLVSCGYDSGVRVWQVSTGHLLRSGGEQLVDSVAVASDGKRLAVGLIDDRAEIWD 1024

Query: 161  -DIYQSITGEKG--DFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
             + ++ +    G  ++  ++ F  +     SG    ++ + D     + +   +    ++
Sbjct: 1025 LETFEKLQIFPGHREWAWQVAFSPDGRILASGSHDGTVRLWDSAEGKLLHTLEAHRGWVW 1084

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               FSP+ Q +A A  D +      + +    R  +      S +++  FS +G R L++
Sbjct: 1085 RVAFSPDGQFLASAGTDAKAA----VWEVATGRRLRAWQAHNSWVISVAFSPDG-RILLT 1139

Query: 276  VQKDEAMDIYSVDLQSNA 293
               D  + ++  D ++  
Sbjct: 1140 AGIDVMLKLW--DRETGE 1155


>gi|254414254|ref|ZP_05028021.1| protein kinase domain [Microcoleus chthonoplastes PCC 7420]
 gi|196178929|gb|EDX73926.1| protein kinase domain [Microcoleus chthonoplastes PCC 7420]
          Length = 659

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 98/301 (32%), Gaps = 36/301 (11%)

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIG 141
            Q      +    +   ++ A       ++      + V        R W +   ++I  
Sbjct: 352 PQIPAEIATYQSIELAQTINANASYINYLMISPDGEIVVSGNADKTIRFWHLASGQEIRQ 411

Query: 142 KK-------FFSSPASWRKIAHTISD---DIYQSITGEKG----DFNSRILFVSESVV-- 185
                    +F+  + W K+     D    ++  +T EK       +S + ++  S    
Sbjct: 412 LTGYTKPVNYFAINSDWDKLVTGSGDKNIQVWNLVTQEKNQTLSGHSSFVNYLVISPDGK 471

Query: 186 ---SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              SG    ++ + +   G  IR LT     + +    SP+ + +   + D      + L
Sbjct: 472 MLISGSADKTIKLWNLATGQLIRTLTGHSSSVNYL-EISPDGKMLVSGSADK----TIKL 526

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +  + +    S + A   S +GK  + S   D+ + ++++         +T   
Sbjct: 527 WDLATGQLIRTMTGHSSSVNALEISPDGKTLV-SGSADKTIKLWNL-ATGREIRTMTGHS 584

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +   SPD   +   S     + + +         R  +   +S      SP G+ +
Sbjct: 585 SFVNALEISPDGQVLASGS---ADKTIKLWHLATGQLIRTLKGHLSSVNSIAISPDGETL 641

Query: 362 A 362
            
Sbjct: 642 V 642



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 69/213 (32%), Gaps = 18/213 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+ + V     D      +        +  +++  +   +     +S+  + + +   
Sbjct: 382 ISPDGEIVVSGNADK----TIRFWHLASGQEIRQLTGYTKPVNYFAINSDWDKLV-TGSG 436

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D+ + ++++  Q      L+           SPD   ++  S     + + +        
Sbjct: 437 DKNIQVWNLVTQEKNQT-LSGHSSFVNYLVISPDGKMLISGS---ADKTIKLWNLATGQL 492

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPT 396
            R      +S      SP G ++           I +      Q    +    S++ A  
Sbjct: 493 IRTLTGHSSSVNYLEISPDGKMLVSGSADKT---IKLWDLATGQLIRTMTGHSSSVNALE 549

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            SP G++L+       D   KL+++   GR   
Sbjct: 550 ISPDGKTLV---SGSADKTIKLWNL-ATGREIR 578



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 70/207 (33%), Gaps = 37/207 (17%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
           ++     + +T   S   + + +  G ++LV+G   K          +LWD+   + I  
Sbjct: 487 LATGQLIRTLTGHSSSVNYLEISPDG-KMLVSGSADKT--------IKLWDLATGQLI-- 535

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
           +      +S    A  IS D                    +++VSG    ++ + +    
Sbjct: 536 RTMTGHSSSV--NALEISPD-------------------GKTLVSGSADKTIKLWNLATG 574

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
                       +     SP+ Q +A  + D      + L      +  + +    S + 
Sbjct: 575 REIRTMTGHSSFVNALEISPDGQVLASGSADK----TIKLWHLATGQLIRTLKGHLSSVN 630

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVD 288
           +   S +G+  + S   D+ + ++ V 
Sbjct: 631 SIAISPDGETLV-SGSADKTIKLWRVP 656


>gi|146300107|ref|YP_001194698.1| fibronectin, type III domain-containing protein [Flavobacterium
           johnsoniae UW101]
 gi|146154525|gb|ABQ05379.1| Peptidase family S9-like protein [Flavobacterium johnsoniae UW101]
          Length = 494

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 61/165 (36%), Gaps = 13/165 (7%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R L   +  +   I++ D  +    +LT++   +     +  + +I F +    +  +Y
Sbjct: 215 TRYLFVKKISDNNVIFAAD-DAGKQYQLTSSDKNSWRPRRNNQAQKIAFIATNGSQNDIY 273

Query: 330 VMQSNGSDQKRISQ-----DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            M  +G+  K+++         + Y    W+  G    +  F      +  +  DGS   
Sbjct: 274 TMNFDGTGIKKVTSSVPIAGFNSDYIGYSWNASGSEFIYPSFD----KLYRINSDGSGLT 329

Query: 385 LLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            + +  N +  +   WS  G  +           +++Y ID +G 
Sbjct: 330 KIFQTPNGKFISECDWSADGTKIALKVNDANGYNAEVYVIDTSGT 374



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 52/293 (17%), Positives = 108/293 (36%), Gaps = 37/293 (12%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +R LFV +   + +      +   D A  +Y   S D+  + PR +   QK+A+    +
Sbjct: 214 TTRYLFVKKISDNNV------IFAADDAGKQYQLTSSDKNSWRPRRNNQAQKIAFIA-TN 266

Query: 234 EDILRVYLMDTRIDRAPKR-----IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                +Y M+       K      I  F S  +   ++++G   +          +Y ++
Sbjct: 267 GSQNDIYTMNFDGTGIKKVTSSVPIAGFNSDYIGYSWNASGSEFIY----PSFDKLYRIN 322

Query: 289 LQSNATERL---TNTLFINISASYSPDSSQIVF-ESDREG-KEQLYVMQSNGSDQKRISQ 343
              +   ++    N  FI     +S D ++I    +D  G   ++YV+ ++G+    I  
Sbjct: 323 SDGSGLTKIFQTPNGKFI-SECDWSADGTKIALKVNDANGYNAEVYVIDTSGTITASILS 381

Query: 344 DKEASYFDPVWSPQGDLIAFTK----FSGEKF-----AIGVMK-KDGSQERLLVE---DS 390
            +  +     +S  G  + +T+    F    +      I        S  +++ E    +
Sbjct: 382 GQPGAVGGLNFSVTGLKLIYTRDITGFENSTYRQLDTRIFEYSFVTSSSYQIVTEKISGT 441

Query: 391 NLQAPTWSPSGRSLIFS-RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           N     ++P+   LIF+    DG +   +    +   N  ++      S P W
Sbjct: 442 NDLDVRYAPNESELIFTNTSNDGISVKNILKTSIGVANSRVVLFSG-TSMPDW 493


>gi|71909211|ref|YP_286798.1| WD-40 repeat-containing protein [Dechloromonas aromatica RCB]
 gi|71848832|gb|AAZ48328.1| WD-40 repeat-containing protein [Dechloromonas aromatica RCB]
          Length = 1211

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 58/352 (16%), Positives = 117/352 (33%), Gaps = 51/352 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRK-----------QIIG--------KKFFSSPASWRKI 154
            GR I  G     V  RLW+ + +K           +I G        +    S     ++
Sbjct: 807  GRYIVSGSGDYTV--RLWETETQKPAGDSLRGHTDEITGVLFSRDGERVVSGSYDKTLRL 864

Query: 155  AHTISDDIYQSITGEKGDFNSRILFV---SESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
                +DD    +          + F    +  V +G  ++   +    G           
Sbjct: 865  WTVAADDPTSVVLNGSDKALKSVAFSPDGTRLVWAGEDQDVHVLDLTTGKTTGKPFSGHR 924

Query: 212  QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            + ++    SP+ +++A  + D    +R++   T     P   G+    +    FS +G R
Sbjct: 925  EAVYSVAVSPDSKRIASGSSDMS--VRLWDAATGALLVPPLQGHL-GTVYGVAFSPDGAR 981

Query: 272  ALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
             + S   D  +  +  +  S A     ++       S ++S D  +IV  S+ +GK +L+
Sbjct: 982  LV-SGSADGTLRQW--NAGSGAPIGSPMSGEGGSVSSVAFSRDGRRIVSASE-DGKLRLW 1037

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LL 386
               + G    +       +     +S  G LI       +  ++ +   +        L 
Sbjct: 1038 DT-ATGKPIGKPLVGHLKAVNSVAFSRDGRLIVSAS---DDMSLRLWDANSGAPIGKPLT 1093

Query: 387  VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                 + +  +SP GR ++       D   +L+ +           TP  A 
Sbjct: 1094 GHTHYVNSVAFSPDGRYVV---SGSKDQTLRLWDV--------RTGTPVGAP 1134



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/289 (16%), Positives = 96/289 (33%), Gaps = 35/289 (12%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
              L    RLWD     Q++G+       S R  A   S D                   
Sbjct: 683 AGGLDGNLRLWDAATG-QMLGEPLKGH--SQRVCAVAFSPD------------------- 720

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            + +VSG    +L + +   G     +     + ++   +SPN  ++   + D    L  
Sbjct: 721 GQHIVSGGDDKTLRLWNVSSGQPSGEVLKGHTEAVYSVAYSPNGLRIVSGSSDATLRLWD 780

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                 I    KR    R  IL   FS +G+  + S   D  + ++  + Q  A + L  
Sbjct: 781 ARTGKPIGDPLKR---HRKAILGVAFSPDGRYIV-SGSGDYTVRLWETETQKPAGDSLRG 836

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                    +S D  ++V  S  +   +L+ + ++      +    + +     +SP G 
Sbjct: 837 HTDEITGVLFSRDGERVVSGSY-DKTLRLWTVAADD-PTSVVLNGSDKALKSVAFSPDGT 894

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLI 405
            + +    GE   + V+     +        + +   +   SP  + + 
Sbjct: 895 RLVWA---GEDQDVHVLDLTTGKTTGKPFSGHREAVYSVAVSPDSKRIA 940



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/305 (17%), Positives = 101/305 (33%), Gaps = 45/305 (14%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
             +       +  RLWD      +        P             +Y       G     
Sbjct: 937  KRIASGSSDMSVRLWDAATGALL------VPPLQGHLG------TVYGVAFSPDGA---- 980

Query: 177  ILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                   +VSG    +L   +   GA I          +    FS + +++  A+ D + 
Sbjct: 981  ------RLVSGSADGTLRQWNAGSGAPIGSPMSGEGGSVSSVAFSRDGRRIVSASEDGK- 1033

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT- 294
             LR++   T        +G+ +++  +  FS +G R ++S   D ++ ++  D  S A  
Sbjct: 1034 -LRLWDTATGKPIGKPLVGHLKAVN-SVAFSRDG-RLIVSASDDMSLRLW--DANSGAPI 1088

Query: 295  -ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDP 352
             + LT       S ++SPD   +V  S     + L +             +  +   F  
Sbjct: 1089 GKPLTGHTHYVNSVAFSPDGRYVVSGSK---DQTLRLWDVRTGTPVGAPLEGHSDVIFGV 1145

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-W----SPSGRSLIFS 407
             +SP G  +A            V   +   ERL  +     + + W    SP    + ++
Sbjct: 1146 TFSPDGRQVASVSGDSSLRRWPV--LESWAERLCAKLGRNMSDSEWQRLVSPD---IPYA 1200

Query: 408  RKKDG 412
            R+  G
Sbjct: 1201 RQCPG 1205



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 95/295 (32%), Gaps = 45/295 (15%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSE-----------------------SVVSGIIK 190
            AH +SD+ Y            R  F+                          +V+G   
Sbjct: 544 AAHRLSDEAYPQ-ASPGALGALRAEFMRSARLLHLSESDEAITTLDLSPDGLRIVTGSRN 602

Query: 191 NSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            SL + +   GA I          +    FSP+ + +  A+ D      + L +      
Sbjct: 603 GSLQLWEAASGAPIGKPLIGHSSYVNSVAFSPDGKAIVSASRDH----TLRLWEAGTGNP 658

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISA 307
             +     S + +  FS  G+R + +   D  + ++  D  +     E L        + 
Sbjct: 659 LGKPLQSDSAVCSVAFSPLGQRIV-AGGLDGNLRLW--DAATGQMLGEPLKGHSQRVCAV 715

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD   IV   D +   +L+ +  +G     + +    + +   +SP G  I      
Sbjct: 716 AFSPDGQHIVSGGD-DKTLRLWNVS-SGQPSGEVLKGHTEAVYSVAYSPNGLRIVSGSSD 773

Query: 368 GEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                + +      +     L      +    +SP GR ++      GD   +L+
Sbjct: 774 AT---LRLWDARTGKPIGDPLKRHRKAILGVAFSPDGRYIV---SGSGDYTVRLW 822



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 94/251 (37%), Gaps = 15/251 (5%)

Query: 182 ESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           + +V+G +  +L + D   G  +        Q +    FSP+ Q +   +  D+  LR++
Sbjct: 679 QRIVAGGLDGNLRLWDAATGQMLGEPLKGHSQRVCAVAFSPDGQHI--VSGGDDKTLRLW 736

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLT 298
            + +    + + +      + +  +S NG R + S   D  + ++  D ++       L 
Sbjct: 737 NVSSG-QPSGEVLKGHTEAVYSVAYSPNGLRIV-SGSSDATLRLW--DARTGKPIGDPLK 792

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQ 357
                 +  ++SPD   IV  S   G   + + ++        S          V +S  
Sbjct: 793 RHRKAILGVAFSPDGRYIVSGS---GDYTVRLWETETQKPAGDSLRGHTDEITGVLFSRD 849

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           G+ +    +  +   +  +  D     +L   D  L++  +SP G  L+++ +       
Sbjct: 850 GERVVSGSYD-KTLRLWTVAADDPTSVVLNGSDKALKSVAFSPDGTRLVWAGEDQDVHVL 908

Query: 417 KLYSIDLNGRN 427
            L +    G+ 
Sbjct: 909 DLTTGKTTGKP 919



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 62/163 (38%), Gaps = 17/163 (10%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDR 322
            S +G R + +  ++ ++ ++     S A   + L        S ++SPD   IV  S R
Sbjct: 589 LSPDGLRIV-TGSRNGSLQLWE--AASGAPIGKPLIGHSSYVNSVAFSPDGKAIVSAS-R 644

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +   +L+  ++   +        +++     +SP G  I      G    + +      Q
Sbjct: 645 DHTLRLW--EAGTGNPLGKPLQSDSAVCSVAFSPLGQRIVAGGLDG---NLRLWDAATGQ 699

Query: 383 ---ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              E L      + A  +SP G+ ++       D   +L+++ 
Sbjct: 700 MLGEPLKGHSQRVCAVAFSPDGQHIV---SGGDDKTLRLWNVS 739


>gi|256839074|ref|ZP_05544584.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739993|gb|EEU53317.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 449

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 92/317 (29%), Gaps = 56/317 (17%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E G     I+ + +  +    +  +   D  G N          +        +  ++ +
Sbjct: 142 EPGYEKWHIVGIYQRNLESFDEQPIIRNDMTGYNC---------MNCHSFCMGDPGQMMF 192

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---------- 278
                     +           K  G   +M   P +  +G+    SV            
Sbjct: 193 HMRAANGGTYIVQDKKISKLNTKTNGTISNMTY-PFWHPSGRYITTSVNDIKQFFHSVKE 251

Query: 279 ------DEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFES--------- 320
                 D   D+   D+++        L          ++SPD   + F +         
Sbjct: 252 KKMEVFDLESDVVVYDVKNKEILSKASLITKDAFETFPAFSPDGKWLYFCTAPAQKMPEN 311

Query: 321 -DREGKEQLYV-MQSNGSDQK----RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            D+       V    +  +       +      SY  P  SP G  + +T+ +  +F I 
Sbjct: 312 YDKVRYNLCRVAFDPDRGEISFPIDTLVHADSLSYTFPRISPDGRFLMYTETAYGQFPIW 371

Query: 375 VMKKDGSQE----RLLVEDSNLQAP------TWSPSGRSLIFSRKKDGD--TGSKLYSID 422
               +        R  ++ S L +P      +WS +   ++FS ++D    T   +  I 
Sbjct: 372 HPDAEIRMMDLENRTAMDMSALNSPDTDSYHSWSSNSDWVVFSSRRDNGLYTLPYICYIG 431

Query: 423 LNGRNETLINTPAYASD 439
            +G+       P    D
Sbjct: 432 KDGKPSKPFLLPQEDPD 448


>gi|153871585|ref|ZP_02000720.1| WD-40 repeat protein [Beggiatoa sp. PS]
 gi|152071949|gb|EDN69280.1| WD-40 repeat protein [Beggiatoa sp. PS]
          Length = 1036

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/313 (16%), Positives = 103/313 (32%), Gaps = 32/313 (10%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDV   +Q +GK         + +A +    I   +     D   R
Sbjct: 665 KTLASGSRDKTVRLWDVAT-RQPLGKPLIGHSKKVQSVAFSPDGKI---LASGNLDDTVR 720

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--YDDE 234
           +  V                 +    ++ +            FSP+ + +A  +  +   
Sbjct: 721 LWDVVTRQPLSEPFVGHWHSKKIQKKVQSV-----------AFSPDGKILASVSGHFLVN 769

Query: 235 DILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               V L D    +   + +      + +  FS NGK    S   D+ + ++ V  + + 
Sbjct: 770 PNNTVKLWDVATRQPLGEPLVGHSHWVYSVAFSPNGKTLA-SGSSDDTVRLWDVATRQSL 828

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ---DKEASYF 350
            + L        S ++SPD   +       G     V+  + + ++ + +          
Sbjct: 829 GDPLVGHSDSVKSVTFSPDGKTLA-----SGSNDKTVILWDVATRQPLGKPLVGHSWFVN 883

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIG-VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              +SP G  +A +    +   +  V  K    E L     ++Q+  +SP G++L     
Sbjct: 884 SVTFSPDGKTLA-SGIEDKSVKLWDVASKQPLGEPLNGHSGSVQSVAFSPDGKTLASGSY 942

Query: 410 KDGDTGSKLYSID 422
              D   +L+ +D
Sbjct: 943 ---DKTIRLWDVD 952



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 59/335 (17%), Positives = 116/335 (34%), Gaps = 25/335 (7%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL-WDVKDRKQII 140
           I++   +Q   N     +      L AQ ++  +V   G         L   V   K   
Sbjct: 306 IARIEAEQSERNAKEQAQIAFIEKLAAQSVLATQVPNFGNGYYEHALLLAVQVFKEKDNG 365

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRD 199
             +     A  R+            + G  G   S    +  +++ SG   N++ + D +
Sbjct: 366 VSRSTLLRAVQRQQQRK------SFLYGHSGSVYSVAFSLDGKTLASGSYDNTVRLWDVE 419

Query: 200 G-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
               +         ++    F PN + +A  + D    +R++ + TR       IG+   
Sbjct: 420 TRQPLGEPLVGHSNLVKSVAFHPNGKILASGSND--KTVRLWDVATRQPLHEPLIGHSY- 476

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQI 316
           ++++  FS NGK    S   D+ + ++  D+ +     E L        S ++SPD   +
Sbjct: 477 LVVSVAFSPNGKTLA-SGSGDKTVRLW--DVATRQPLGEPLVGHSNWVQSVAFSPDGKNL 533

Query: 317 VFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEK 370
              S   G        + +                +S+     +SP G  +A     G  
Sbjct: 534 A--SGSGGVFGNEDNTVILWDVATRQPLGDPLGGHSSHVLSVAFSPDGKTLASGSHDGTM 591

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
               V  +    E L+   +++ +  +SP G++L 
Sbjct: 592 RLWNVATRQPLGEPLVGSFNSVYSVAFSPDGKTLA 626



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/320 (15%), Positives = 105/320 (32%), Gaps = 49/320 (15%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLW+V   +Q +G+    S  S           +Y       G     
Sbjct: 580 KTLASGSHDGTMRLWNVAT-RQPLGEPLVGSFNS-----------VYSVAFSPDG----- 622

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                +++ SG + +++ + D     +          +    FSP+ + +A  + D    
Sbjct: 623 -----KTLASGNLDDTVRLWDVIRQPLGEPLVGHSMSVESVAFSPDGKTLASGSRD--KT 675

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           +R++ + TR       IG+ + +  +  FS +GK  L S   D+ + ++ V      T +
Sbjct: 676 VRLWDVATRQPLGKPLIGHSKKVQ-SVAFSPDGK-ILASGNLDDTVRLWDV-----VTRQ 728

Query: 297 LTNTLFINISAS-----------YSPDSSQIVFESDR---EGKEQLYVMQSNGSDQ-KRI 341
             +  F+    S           +SPD   +   S          + +            
Sbjct: 729 PLSEPFVGHWHSKKIQKKVQSVAFSPDGKILASVSGHFLVNPNNTVKLWDVATRQPLGEP 788

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                   +   +SP G  +A            V  +    + L+    ++++ T+SP G
Sbjct: 789 LVGHSHWVYSVAFSPNGKTLASGSSDDTVRLWDVATRQSLGDPLVGHSDSVKSVTFSPDG 848

Query: 402 RSLIFSRKKDGDTGSKLYSI 421
           ++L        D    L+ +
Sbjct: 849 KTLA---SGSNDKTVILWDV 865



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 101/303 (33%), Gaps = 44/303 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                  L    RLWDV  +           P     + H++S +         G     
Sbjct: 623 KTLASGNLDDTVRLWDVIRQ-----------PLGEPLVGHSMSVESVA--FSPDG----- 664

Query: 177 ILFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                +++ SG    ++ + D      +        + +    FSP+ + +A  + + +D
Sbjct: 665 -----KTLASGSRDKTVRLWDVATRQPLGKPLIGHSKKVQSVAFSPDGKILA--SGNLDD 717

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSM-----ILAPRFSSNGKRAL-----ISVQKDEAMDIY 285
            +R++ + TR   +   +G++ S      + +  FS +GK          V  +  + ++
Sbjct: 718 TVRLWDVVTRQPLSEPFVGHWHSKKIQKKVQSVAFSPDGKILASVSGHFLVNPNNTVKLW 777

Query: 286 SVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-IS 342
             D+ +     E L        S ++SP+   +   S     + + +             
Sbjct: 778 --DVATRQPLGEPLVGHSHWVYSVAFSPNGKTLASGSS---DDTVRLWDVATRQSLGDPL 832

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                S     +SP G  +A            V  +    + L+     + + T+SP G+
Sbjct: 833 VGHSDSVKSVTFSPDGKTLASGSNDKTVILWDVATRQPLGKPLVGHSWFVNSVTFSPDGK 892

Query: 403 SLI 405
           +L 
Sbjct: 893 TLA 895



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 58/179 (32%), Gaps = 29/179 (16%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G     V  RLWDV  R+ +              + H  SD +        G  
Sbjct: 805 GKTLASGSSDDTV--RLWDVATRQSL----------GDPLVGH--SDSVKSVTFSPDG-- 848

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                   +++ SG    ++ + D      +          +    FSP+ + +A     
Sbjct: 849 --------KTLASGSNDKTVILWDVATRQPLGKPLVGHSWFVNSVTFSPDGKTLA---SG 897

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            ED               + +      + +  FS +GK    S   D+ + ++ VD +S
Sbjct: 898 IEDKSVKLWDVASKQPLGEPLNGHSGSVQSVAFSPDGKTLA-SGSYDKTIRLWDVDPES 955


>gi|260754004|ref|YP_003226897.1| peptidase S9B dipeptidylpeptidase IV domain protein [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
 gi|258553367|gb|ACV76313.1| peptidase S9B dipeptidylpeptidase IV domain protein [Zymomonas
           mobilis subsp. mobilis NCIMB 11163]
          Length = 735

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 82/249 (32%), Gaps = 63/249 (25%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           ++ R   R+G    ++    +S +GK  L+ +  D    +Y   L   + +++T+T    
Sbjct: 98  KMRRERARVGGSLGIVSY-NWSPDGKTILVPLDGD----LYLASLD-GSVQQVTHTAATE 151

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------- 353
           + A  S     + F  D    + L+V+    + ++ +SQD   S                
Sbjct: 152 VDAQVSATGHYLSFVRD----QNLFVIDLKNNQEQALSQDGGGSLTWGSAEFVAQEEMSR 207

Query: 354 -----WSPQGDLIAFTKFSGEKFAI------------------------------GVMKK 378
                WSP    +A  +    +  I                               +M  
Sbjct: 208 TKGHWWSPDDSRLAVARVDESQVHIVTRAAIGANGTQTYQQRYPMAGTPNAKVELYLMNP 267

Query: 379 DGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           DGS++  +   +N         WSP  +SL   R+        L  +D +     L+ + 
Sbjct: 268 DGSKKVKVDLGNNDDIYLARVNWSPDSQSLYVQRESRDQQRLDLLKVDSHTGQSQLLFSE 327

Query: 435 AYASDPQWV 443
              S   W+
Sbjct: 328 TSKS---WI 333



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 63/194 (32%), Gaps = 37/194 (19%)

Query: 251 KRIGNFRSMILAPR---FSSNGKRALISVQKDE---AMDIYSVDLQSNATERLTNTLFIN 304
           +   +      APR    S +G+ A +   + +     D++++D  +  +  L ++  + 
Sbjct: 29  RVFASPSLSGSAPRALSLSPDGRYATLLRSRPDDLNRYDLWAIDTTTGESRMLIDSKKVG 88

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             A  S                     ++    ++R             WSP G  I   
Sbjct: 89  SGAEIS---------------------EAEKMRRERARVGGSLGIVSYNWSPDGKTILV- 126

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                   + +   DGS +++    +       S +G  L F R ++      L+ IDL 
Sbjct: 127 ---PLDGDLYLASLDGSVQQVTHTAATEVDAQVSATGHYLSFVRDQN------LFVIDLK 177

Query: 425 GRNETLINTPAYAS 438
              E  ++     S
Sbjct: 178 NNQEQALSQDGGGS 191



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 85/274 (31%), Gaps = 53/274 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRV-----------------------------YLMDTRIDR 248
            +SP+  ++A A  D+  +  V                             YLM+    +
Sbjct: 212 WWSPDDSRLAVARVDESQVHIVTRAAIGANGTQTYQQRYPMAGTPNAKVELYLMNPDGSK 271

Query: 249 APKR-IGNFRSMILA-PRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             K  +GN   + LA   +S + +   +    +  + +D+  VD  +  ++ L    F  
Sbjct: 272 KVKVDLGNNDDIYLARVNWSPDSQSLYVQRESRDQQRLDLLKVDSHTGQSQLL----FSE 327

Query: 305 ISASYSP--------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            S S+              +++ S+R G   LY  Q        ++Q    +        
Sbjct: 328 TSKSWINLNNDLQILKDDSLIWASERSGYRHLYHWQK--GKWTTLTQGDWMTLGVVGLDQ 385

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +  L+ F           +   D    S+ R L E               L+  R     
Sbjct: 386 KKGLLYFLANKSTPIEQHLYVIDYHHPSEPRQLTEAGWYNNAVMDKGANRLLIGRSNTSQ 445

Query: 414 TGSKLYSIDLNGRNETLINTPA-YASDPQWVGFM 446
              ++Y  D  G+  + I      A  P +  ++
Sbjct: 446 P-PQVYLADTKGKRLSWIEENKLDARHP-YAPYL 477


>gi|295688856|ref|YP_003592549.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Caulobacter segnis ATCC 21756]
 gi|295430759|gb|ADG09931.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Caulobacter segnis ATCC 21756]
          Length = 703

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 51/346 (14%), Positives = 110/346 (31%), Gaps = 75/346 (21%)

Query: 165 SITGEKGDFNSRILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            ++  +   + R +  S       +     SL + D             D      R+S 
Sbjct: 49  RLSDPRVSPDGRYVLYSVRTMDYPANKASMSLWIADLKTKMAPRRLKISDGGASSGRWSA 108

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---- 277
           + + +  ++       +V+  D        ++      + A + + +GK  ++++     
Sbjct: 109 DGKSIYLSSSRAGGTEQVFKTD-ATGETATQVTATPFDVQAYKVAPDGKTIVVALAVFPD 167

Query: 278 -----------------------------------KDEAMD---IYSVD---LQSNATER 296
                                               D A +    Y++D   + +     
Sbjct: 168 CADFACTEARLAAKTATKATGVVYDRLFVRHWDTWADGARNHLFAYALDGQGVATGQPID 227

Query: 297 L---------TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN------GSDQKRI 341
           L         T     +   + S DS  ++F +   GK++ +    +          K +
Sbjct: 228 LMKGFDGDTPTKPYGGDEDFTISFDSKSVIFSAKVAGKDEAWTTNYDMWGVPLDGSAKPV 287

Query: 342 --SQDKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
             + D +A     + SP G LIA+       F  ++FAI +  +   + R L    +  A
Sbjct: 288 NYTADNKAWDTTGIASPDGKLIAYRAMKRPGFEADRFAIMIYDETTQKLRELAPTWDRSA 347

Query: 395 P--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
               WS  G+++  +    G    KL++ID+     T +    + S
Sbjct: 348 DAIAWSRDGKTIYATALDVGQG--KLFAIDVKSGKVTALTGEGHVS 391



 Score = 65.8 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/258 (18%), Positives = 89/258 (34%), Gaps = 40/258 (15%)

Query: 214 LFEPRFSPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           L +PR SP+ + V Y+         +  + +++ D +   AP+R+        + R+S++
Sbjct: 50  LSDPRVSPDGRYVLYSVRTMDYPANKASMSLWIADLKTKMAPRRLKISDGGASSGRWSAD 109

Query: 269 GKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV---------- 317
           GK   +S  +      ++  D       ++T T F   +   +PD   IV          
Sbjct: 110 GKSIYLSSSRAGGTEQVFKTDATGETATQVTATPFDVQAYKVAPDGKTIVVALAVFPDCA 169

Query: 318 -FESDREGKEQLYVMQSNGSDQKRI------SQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            F             ++ G    R+      +    A      ++  G  +A        
Sbjct: 170 DFACTEARLAAKTATKATGVVYDRLFVRHWDTWADGARNHLFAYALDGQGVA------TG 223

Query: 371 FAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLN 424
             I +MK  DG            +  T S   +S+IFS K  G      T   ++ + L+
Sbjct: 224 QPIDLMKGFDGDTPTKPY--GGDEDFTISFDSKSVIFSAKVAGKDEAWTTNYDMWGVPLD 281

Query: 425 GRNETLINTPAYASDPQW 442
           G  + +  T        W
Sbjct: 282 GSAKPVNYTADNK---AW 296



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 88/284 (30%), Gaps = 37/284 (13%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDE 234
           R+   + +  +G++ + L V   D                   ++   +   +A   D +
Sbjct: 177 RLAAKTATKATGVVYDRLFVRHWD------------------TWADGARNHLFAYALDGQ 218

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-------AMDIYSV 287
            +     +D                      S + K  + S +            D++ V
Sbjct: 219 GVATGQPIDLMKGFDGDTPTKPYGGDEDFTISFDSKSVIFSAKVAGKDEAWTTNYDMWGV 278

Query: 288 DLQSN-ATERLT-NTLFINISASYSPDSSQIVFES-DREG----KEQLYVMQSNGSDQKR 340
            L  +      T +    + +   SPD   I + +  R G    +  + +        + 
Sbjct: 279 PLDGSAKPVNYTADNKAWDTTGIASPDGKLIAYRAMKRPGFEADRFAIMIYDETTQKLRE 338

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           ++   + S     WS  G  I  T     +  +  +     +   L  + ++ A    PS
Sbjct: 339 LAPTWDRSADAIAWSRDGKTIYATALDVGQGKLFAIDVKSGKVTALTGEGHVSAFDVGPS 398

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQWV 443
           G  L+++      + S+L+ +   G    + +  + A  D  W 
Sbjct: 399 G--LVYASD-SLKSPSELFVLPAKGPVVKVASVSSDALKDVAWG 439



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 60/176 (34%), Gaps = 19/176 (10%)

Query: 173 FNSRILFVSESVVSG----IIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVA 227
           F+S+ +  S  V            +  +  DG A     T            SP+ + +A
Sbjct: 251 FDSKSVIFSAKVAGKDEAWTTNYDMWGVPLDGSAKPVNYTADNKAWDTTGIASPDGKLIA 310

Query: 228 YATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           Y          D   + + D    +  +    +     A  +S +GK    +        
Sbjct: 311 YRAMKRPGFEADRFAIMIYDETTQKLRELAPTWDRSADAIAWSRDGKTIYATALDVGQGK 370

Query: 284 IYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNG 335
           ++++D++S     LT   +    ++  S       +V+ SD      +L+V+ + G
Sbjct: 371 LFAIDVKSGKVTALTGEGHVSAFDVGPS------GLVYASDSLKSPSELFVLPAKG 420


>gi|311746321|ref|ZP_07720106.1| dipeptidyl aminopeptidase [Algoriphagus sp. PR1]
 gi|126576557|gb|EAZ80835.1| dipeptidyl aminopeptidase [Algoriphagus sp. PR1]
          Length = 689

 Score = 72.0 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 86/235 (36%), Gaps = 28/235 (11%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              +V+ +D      P ++   +  +    +S +G      V +     +  +       
Sbjct: 155 KAGQVWTVDLASSEKPVQLFEIKGNVNELSYSPSGD-LAFVVNR-GTHSMIGIFRNKRLP 212

Query: 295 ERLTNTLF-INISASYSPDSSQIVFESDREGKE-------------QLYVMQSNGSDQKR 340
            +  N  F  + + ++S D  +I +     G+              +++V   N  D ++
Sbjct: 213 IQWVNPSFHRDSNIAWSEDGQKIAYIRRPGGRGAAFPELEPRHSPWEIWVADMNTGDSEK 272

Query: 341 ISQDKE---ASYFDPVWSPQG-DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           + +  E   ASY  P ++  G D IA+  +      +  +  +  + +LL    +     
Sbjct: 273 LWEAPETLAASYIYPFFAFSGNDHIAYLSYEDGWQHLYAIDINSKETKLLT-PGDYMVEQ 331

Query: 397 W--SPSGRSLIFSRKKDGDTG----SKLYSID-LNGRNETLINTPAYASDPQWVG 444
              SP+G  LIFS     +        + ++D L+G+     +     + P WVG
Sbjct: 332 IKQSPNGEKLIFSANTGSEQEDLDRRHIGTVDILSGKLTWETSGEGIEAYPVWVG 386



 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 85/250 (34%), Gaps = 42/250 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRV----------YLMDTRIDRAPKRIGNFRSMILA--PRFS 266
           FSP+   + +    D                 L +  I +     G   +++ A  P   
Sbjct: 87  FSPDGNWLVFVRGGDHGGGNASSTVNAQNLPILPNVEIWKINLESGKVETIVEADNPSIG 146

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            + +   +     +A  +++VDL S+    +L          SYSP    + F  +R   
Sbjct: 147 KDHQLLYV-----KAGQVWTVDLASSEKPVQLFEIKGNVNELSYSPSGD-LAFVVNRGTH 200

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------------FA 372
             + + ++     + +         +  WS  G  IA+ +  G +             + 
Sbjct: 201 SMIGIFRNKRLPIQWV-NPSFHRDSNIAWSEDGQKIAYIRRPGGRGAAFPELEPRHSPWE 259

Query: 373 IGVMKKDGSQERLL-----VEDSNLQAPTWSPSGR-SLIFSRKKDGDTGSKLYSIDLNGR 426
           I V   +      L        ++   P ++ SG   + +   +DG     LY+ID+N +
Sbjct: 260 IWVADMNTGDSEKLWEAPETLAASYIYPFFAFSGNDHIAYLSYEDG--WQHLYAIDINSK 317

Query: 427 NETLINTPAY 436
              L+ TP  
Sbjct: 318 ETKLL-TPGD 326



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 68/209 (32%), Gaps = 24/209 (11%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRIDRAP 250
                           +S + QK+AY                      +++ D     + 
Sbjct: 212 PIQWVNPSFHRDSNIAWSEDGQKIAYIRRPGGRGAAFPELEPRHSPWEIWVADMNTGDSE 271

Query: 251 KRIGNFRSMILA---PRFSSNGK-RALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           K      ++  +   P F+ +G         +D    +Y++D+ S  T+ LT   ++   
Sbjct: 272 KLWEAPETLAASYIYPFFAFSGNDHIAYLSYEDGWQHLYAIDINSKETKLLTPGDYMVEQ 331

Query: 307 ASYSPDSSQIVFESDREG------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              SP+  +++F ++         +  +  +          +   E     PVW      
Sbjct: 332 IKQSPNGEKLIFSANTGSEQEDLDRRHIGTVDILSGKLTWETS-GEGIEAYPVWVGNSGK 390

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +AF     ++  +  +K  G+  +LL E 
Sbjct: 391 MAFFSADAQRSHLVAIK-SGNDTKLLGES 418



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 79/239 (33%), Gaps = 71/239 (29%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFES- 320
           S+ G++   ++ +    ++Y  +  +   ++LT+    +     S  +SPD + +VF   
Sbjct: 40  SATGEKIAWAMNEQGKRNVYMAEGPAFTAKKLTDFNEDDGQEISSLQFSPDGNWLVFVRG 99

Query: 321 -DREGKE---------------------------------------------------QL 328
            D  G                                                     Q+
Sbjct: 100 GDHGGGNASSTVNAQNLPILPNVEIWKINLESGKVETIVEADNPSIGKDHQLLYVKAGQV 159

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           + +    S++     + + +  +  +SP GD +AF    G    IG+ +      + +  
Sbjct: 160 WTVDLASSEKPVQLFEIKGNVNELSYSPSGD-LAFVVNRGTHSMIGIFRNKRLPIQWVNP 218

Query: 389 DSNLQAP-TWSPSGRSLIFSRKKDGDTGS-----------KLYSIDLN-GRNETLINTP 434
             +  +   WS  G+ + + R+  G   +           +++  D+N G +E L   P
Sbjct: 219 SFHRDSNIAWSEDGQKIAYIRRPGGRGAAFPELEPRHSPWEIWVADMNTGDSEKLWEAP 277



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 84/244 (34%), Gaps = 37/244 (15%)

Query: 175 SRILFVSESVVSGII---------KNSLCVMDRDGANIRYL-----TPSRDQILFEPRFS 220
            +I ++      G              + V D +  +   L     T +   I     FS
Sbjct: 233 QKIAYIRRPGGRGAAFPELEPRHSPWEIWVADMNTGDSEKLWEAPETLAASYIYPFFAFS 292

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD- 279
            N   +AY +Y+D     +Y +D    +  K +     M+   + S NG++ + S     
Sbjct: 293 GN-DHIAYLSYEDG-WQHLYAIDIN-SKETKLLTPGDYMVEQIKQSPNGEKLIFSANTGS 349

Query: 280 -----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                +   I +VD+ S      T+   I     +  +S ++ F S    +  L  ++ +
Sbjct: 350 EQEDLDRRHIGTVDILSGKLTWETSGEGIEAYPVWVGNSGKMAFFSADAQRSHLVAIK-S 408

Query: 335 GSDQKRISQDKEASYFDPV----------WSPQGDLI---AFTKFSGEKFAIGVMKKDGS 381
           G+D K + +    S F              +P G  +    F K  G     GV+   G 
Sbjct: 409 GNDTKLLGESIIPSDFPQDQLVTPKQVKFTAPDGTTVYGQLFEKEGGNSEKPGVIFVHGG 468

Query: 382 QERL 385
            +R 
Sbjct: 469 PQRQ 472


>gi|317121412|ref|YP_004101415.1| histidinol phosphate phosphatase HisJ family [Thermaerobacter
           marianensis DSM 12885]
 gi|315591392|gb|ADU50688.1| histidinol phosphate phosphatase HisJ family [Thermaerobacter
           marianensis DSM 12885]
          Length = 1117

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 34/140 (24%)

Query: 260 ILAPRFSSNGKRALISVQK-DEAMDIYSVDL----QSNATER--LTNTLFINISASYSPD 312
           +  PR + +G R +   +  D   + Y  +L     S       LT    I+ +  +SPD
Sbjct: 28  VGDPRIAPDGDRVVWVERWIDADRNQYRSNLYAAPASGEATPAPLTTGPGIDRAPRWSPD 87

Query: 313 SSQIVFESDR----EG----------------------KEQLYVMQSNGSDQKRISQDKE 346
              + F SDR    +G                      + QLY++ ++G + + +++ K+
Sbjct: 88  GRWLAFLSDRPLPADGAGKRADPAGKAGGAAGRGDEKPRSQLYLLPAHGGEARLLTRFKQ 147

Query: 347 ASYFDPVWSPQGDLIAFTKF 366
                  WSP G  ++    
Sbjct: 148 G-VSPAGWSPDGRYLSVVAQ 166



 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 45/377 (11%), Positives = 100/377 (26%), Gaps = 130/377 (34%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD------------ 233
               +++L      G        +   I   PR+SP+ + +A+ +               
Sbjct: 51  RNQYRSNLYAAPASGEATPAPLTTGPGIDRAPRWSPDGRWLAFLSDRPLPADGAGKRADP 110

Query: 234 ------------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK----------- 270
                       E       +        + +  F+  +    +S +G+           
Sbjct: 111 AGKAGGAAGRGDEKPRSQLYLLPAHGGEARLLTRFKQGVSPAGWSPDGRYLSVVAQVHPE 170

Query: 271 ----------------------------RALISVQKDEAMDIY-----SVDLQSNATE-- 295
                                       R    +        +      +DL        
Sbjct: 171 RGLEAVGDPEPGDDDPYRRYTRGVKVIRRLAYKLDGVGYFTEHRHHALVLDLGEGDAHLS 230

Query: 296 -------------RLTNTLFINISASYSPDSSQIVFE------SDREGKEQLYVMQSNGS 336
                        ++T   +     ++ P   ++V        +DR+    +Y++  +  
Sbjct: 231 QDAAAGAATVPWFQITAGEYDVRWVTWMPSGRELVVVTNPHPDADRQPWTDVYLVPFDPE 290

Query: 337 DQKR-------ISQDK-----------EASYFDPVWSPQGDLIAFTKFSGEKF------A 372
                      +S+D            +   ++ + SP G  IA       ++       
Sbjct: 291 AAAAGGAEPVDLSRDPLPAGVCKLTLSDIEAYEALPSPDGRWIAVRGQDARRYRAYSNTH 350

Query: 373 IGVMKKDGSQERLLVEDSN-----------LQAP----TWSPSGRSLIFSRKKDGDTGSK 417
           + ++  DGSQ R L  +++           +  P     W+P G  L     + G    +
Sbjct: 351 LYLIAADGSQRRCLTAEADLTVGDESVNDIVGEPGAVMAWAPDGSGLYALVSRRG--AVQ 408

Query: 418 LYSIDLNGRNETLINTP 434
           LY   ++G    L + P
Sbjct: 409 LYWFGVDGTIRPLTDGP 425



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 76/272 (27%), Gaps = 54/272 (19%)

Query: 201 ANIRYLTPSRDQILFE----PRFSPNQQKVAYATYDDEDILRVYLMDT-----RIDRAPK 251
           AN R    SRD +       PR +P+  +V +     +     Y  +        +  P 
Sbjct: 11  ANGRRPITSRDLLDLRFVGDPRIAPDGDRVVWVERWIDADRNQYRSNLYAAPASGEATPA 70

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQK----DEA----------------------MDIY 285
            +     +  APR+S +G+       +    D A                        +Y
Sbjct: 71  PLTTGPGIDRAPRWSPDGRWLAFLSDRPLPADGAGKRADPAGKAGGAAGRGDEKPRSQLY 130

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------------REGKEQLYVMQ 332
            +         LT        A +SPD   +   +                G +  Y   
Sbjct: 131 LLPAHGGEARLLTRFKQGVSPAGWSPDGRYLSVVAQVHPERGLEAVGDPEPGDDDPYRRY 190

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE----RLLVE 388
           + G   K I +          ++                 +      G+      ++   
Sbjct: 191 TRG--VKVIRRLAYKLDGVGYFTEHRHHALVLDLGEGDAHLSQDAAAGAATVPWFQITAG 248

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + +++  TW PSGR L+       D   + ++
Sbjct: 249 EYDVRWVTWMPSGRELVVVTNPHPDADRQPWT 280



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 38/128 (29%), Gaps = 33/128 (25%)

Query: 350 FDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSPSG 401
            DP  +P GD + + +       +  +  +      G  +   L       +AP WSP G
Sbjct: 29  GDPRIAPDGDRVVWVERWIDADRNQYRSNLYAAPASGEATPAPLTTGPGIDRAPRWSPDG 88

Query: 402 RSLIFSRKK------------------------DGDTGSKLYSIDLNGRNETLINTPAYA 437
           R L F   +                        D    S+LY +  +G    L+      
Sbjct: 89  RWLAFLSDRPLPADGAGKRADPAGKAGGAAGRGDEKPRSQLYLLPAHGGEARLLTRFKQG 148

Query: 438 SDPQ-WVG 444
             P  W  
Sbjct: 149 VSPAGWSP 156



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/208 (12%), Positives = 53/208 (25%), Gaps = 49/208 (23%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR------------------- 245
           +   + +  +    + P+ +++   T    D  R    D                     
Sbjct: 243 FQITAGEYDVRWVTWMPSGRELVVVTNPHPDADRQPWTDVYLVPFDPEAAAAGGAEPVDL 302

Query: 246 ------IDRAPKRIGNFRSMILAPRFSSNGKRALIS------VQKDEAMDIYSVDLQSNA 293
                        + +  +    P  S +G+   +        +      +Y +    + 
Sbjct: 303 SRDPLPAGVCKLTLSDIEAYEALP--SPDGRWIAVRGQDARRYRAYSNTHLYLIAADGSQ 360

Query: 294 TERLTNT----------LFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              LT              I        +++PD S +     R G  QLY    +G+   
Sbjct: 361 RRCLTAEADLTVGDESVNDIVGEPGAVMAWAPDGSGLYALVSRRGAVQLYWFGVDGT--I 418

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFS 367
           R   D             G   A+ + +
Sbjct: 419 RPLTDGPQVLRGISIDRAGRRCAYLRLT 446



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 6/67 (8%)

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNG--RNETLINTPAYA 437
           R L++   +  P  +P G  +++  +          S LY+   +G      L   P   
Sbjct: 20  RDLLDLRFVGDPRIAPDGDRVVWVERWIDADRNQYRSNLYAAPASGEATPAPLTTGPGID 79

Query: 438 SDPQWVG 444
             P+W  
Sbjct: 80  RAPRWSP 86


>gi|145349481|ref|XP_001419161.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579392|gb|ABO97454.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1354

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINI 305
              P+R+      +     S +G R   +  +D   +IY VD +    ++LT+       
Sbjct: 85  TTPPRRLTQAHGAVQRLVVSPDGSRVAFACAEDGYTEIYVVDARGGPMKQLTHMGASYAR 144

Query: 306 SASYSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASY 349
           +  +S D  ++ F S         ++L+V+  +G    R++      +
Sbjct: 145 ACCFSEDGRRVYFTSSGATAEPNGDELWVVDCDGGAPMRMNLGPVHDF 192



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 56/162 (34%), Gaps = 10/162 (6%)

Query: 269 GKRALISVQKDEAMDIYS-VD-----LQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           G       + D      S +D      ++    RLT           SPD S++ F    
Sbjct: 57  GNELFFVCEDDVYATTISGLDKRESGAETTPPRRLTQAHGAVQRLVVSPDGSRVAFACAE 116

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKK 378
           +G  ++YV+ + G   K+++    +      +S  G  + FT            + V+  
Sbjct: 117 DGYTEIYVVDARGGPMKQLTHMGASYARACCFSEDGRRVYFTSSGATAEPNGDELWVVDC 176

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           DG     +           + +G+ L+   +   DT +K + 
Sbjct: 177 DGGAPMRMNLGPVHDFDVRNVNGKELVVLGRNTEDTATKHWD 218



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 5/97 (5%)

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-- 390
           +  +  +R++Q    +    V SP G  +AF         I V+   G   + L      
Sbjct: 83  AETTPPRRLTQAH-GAVQRLVVSPDGSRVAFACAEDGYTEIYVVDARGGPMKQLTHMGAS 141

Query: 391 NLQAPTWSPSGRSLIFSRK--KDGDTGSKLYSIDLNG 425
             +A  +S  GR + F+         G +L+ +D +G
Sbjct: 142 YARACCFSEDGRRVYFTSSGATAEPNGDELWVVDCDG 178



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 86/280 (30%), Gaps = 31/280 (11%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H   D   Q I   +G      +FV+E V           ++  G   +          +
Sbjct: 311 HLSIDVSRQRIVYTRGG----DVFVAEVVGGEHKSPIRLPIEWRGPRTQLAKRFVHADDW 366

Query: 216 EPRF--SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---------- 263
              +   P    +          + ++           ++ + +S ++AP          
Sbjct: 367 IEDWDLHPEGLTMMVLVRGQPFTMGIWDGPVLSYPPATKLRSPQSSVIAPLASLAQKSQA 426

Query: 264 -----RFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNT---LFINISASYSPDSS 314
                 +  +G+R +         DI    +      +RL      L        SP++ 
Sbjct: 427 RVRHGAYLYDGERLVFVSDASGEEDIEVHWEEAERPAKRLGLHHELLGRVERLIPSPEAP 486

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKF-SGEKFA 372
            +   + R     L ++     + +      E    D   WSP G+ +A+T + + E+  
Sbjct: 487 LVAIVNHR---NSLLIVNVETGEMRTADTSSEVDGIDDLTWSPCGNWLAYTYYLNNERSC 543

Query: 373 IGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
           I ++     +            +P W P G+ L F   ++
Sbjct: 544 IRILDVRNGKVFDATNPVLGDHSPAWDPDGKYLYFLGSRE 583



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 62/150 (41%), Gaps = 21/150 (14%)

Query: 312 DSSQIVFESDREGKEQLYV-MQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSG 368
           D  ++VF SD  G+E + V  +      KR+    E        + SP+  L+A      
Sbjct: 436 DGERLVFVSDASGEEDIEVHWEEAERPAKRLGLHHELLGRVERLIPSPEAPLVAIVNHRN 495

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               + ++  +  + R    D++ +       TWSP G  L ++   + +    +  +D+
Sbjct: 496 S---LLIVNVETGEMR--TADTSSEVDGIDDLTWSPCGNWLAYTYYLNNERSC-IRILDV 549

Query: 424 ------NGRNETL-INTPAYASDPQWVGFM 446
                 +  N  L  ++PA+  D +++ F+
Sbjct: 550 RNGKVFDATNPVLGDHSPAWDPDGKYLYFL 579



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 54/289 (18%), Positives = 97/289 (33%), Gaps = 40/289 (13%)

Query: 155 AHTISDDIYQSITGEKG--DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           AH  S + Y      +G   F      V  + +SG+ K        +    R LT +   
Sbjct: 41  AHAASQEGYYRFPVIRGNELFFVCEDDVYATTISGLDKRE---SGAETTPPRRLTQAHGA 97

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +      SP+  +VA+A  +D     +Y++D R     +      S   A  FS +G+R 
Sbjct: 98  VQRL-VVSPDGSRVAFACAEDG-YTEIYVVDARGGPMKQLTHMGASYARACCFSEDGRRV 155

Query: 273 LISVQK----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
             +           +++ VD    A  R+      +             F+      ++L
Sbjct: 156 YFTSSGATAEPNGDELWVVDCDGGAPMRMNLGPVHD-------------FDVRNVNGKEL 202

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V+  N  D      D  A          G  I +    G    +  +      ERLL  
Sbjct: 203 VVLGRNTEDTATKHWDGYAGGA-------GGEIWY----GTLDNLLRLDLRLPNERLLRN 251

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             N+   +W      + F+ +  G + +    ID N  N  +++   ++
Sbjct: 252 VGNV---SWF-DDEHVAFT-EAGGRSTAFKAKIDTNEFNTRIVDCQGFS 295


>gi|60680330|ref|YP_210474.1| hypothetical protein BF0776 [Bacteroides fragilis NCTC 9343]
 gi|60491764|emb|CAH06522.1| hypothetical protein BF0776 [Bacteroides fragilis NCTC 9343]
          Length = 477

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 45/211 (21%)

Query: 263 PRFSSNGKRALISVQK-------DEAMDIYSVDLQS-------NATERLTN----TLFIN 304
           P +  +G+    SV K            I   D  S        +   LT     T    
Sbjct: 214 PYWHPSGEYIAYSVNKTNQAFHLGGKKPIEVFDQASDVVVYHPRSHRILTTPLLSTASFE 273

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQS------------NGSDQKRISQDKEA----- 347
              ++SPD   + F S  + +  +                 +G+   RI     A     
Sbjct: 274 TFPAFSPDGRTLYFCSAEQKEMPVRYKDVKYSLCSIAFHPEDGTFGDRIDTLISARTLDK 333

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAI-------GVMKKDGSQERLLVEDSNLQAPT---W 397
           S   P  S  G  + FT      F+I        ++       R L E ++    +   W
Sbjct: 334 SISFPKPSFDGKYLMFTLSDYGNFSIWHKEADLWLLDLKTGTYRNLEEVNSDDTESYHNW 393

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           S +    +FS ++     ++LY   ++G+  
Sbjct: 394 SSNSHWFVFSSRRGDGLYTRLYISSVDGQGR 424



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 54/157 (34%), Gaps = 27/157 (17%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGNFRS 258
           S       P FSP+ + + + + + +++   Y                     RI    S
Sbjct: 268 STASFETFPAFSPDGRTLYFCSAEQKEMPVRYKDVKYSLCSIAFHPEDGTFGDRIDTLIS 327

Query: 259 ------MILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLFINI 305
                  I  P+ S +GK  + ++             D++ +DL++     L      + 
Sbjct: 328 ARTLDKSISFPKPSFDGKYLMFTLSDYGNFSIWHKEADLWLLDLKTGTYRNLEEVNSDDT 387

Query: 306 S--ASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQ 338
               ++S +S   VF S R      +LY+   +G  +
Sbjct: 388 ESYHNWSSNSHWFVFSSRRGDGLYTRLYISSVDGQGR 424


>gi|301161863|emb|CBW21407.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 477

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 45/211 (21%)

Query: 263 PRFSSNGKRALISVQK-------DEAMDIYSVDLQS-------NATERLTN----TLFIN 304
           P +  +G+    SV K            I   D  S        +   LT     T    
Sbjct: 214 PYWHPSGEYIAYSVNKTNQAFHLGGKKPIEVFDQASDVVVYHPRSHRILTTPLLSTASFE 273

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQS------------NGSDQKRISQDKEA----- 347
              ++SPD   + F S  + +  +                 +G+   RI     A     
Sbjct: 274 TFPAFSPDGRTLYFCSAEQKEMPVRYKDVKYSLCSIAFHPEDGTFGDRIDTLISARTLDK 333

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAI-------GVMKKDGSQERLLVEDSNLQAPT---W 397
           S   P  S  G  + FT      F+I        ++       R L E ++    +   W
Sbjct: 334 SISFPKPSFDGKYLMFTLSDYGNFSIWHKEADLWLLDLKTGAYRNLEEVNSDDTESYHNW 393

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           S +    +FS ++     ++LY   ++G+  
Sbjct: 394 SSNSHWFVFSSRRGDGLYTRLYISSVDGQGR 424



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 55/157 (35%), Gaps = 27/157 (17%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGNFRS 258
           S       P FSP+ + + + + + +++   Y                     RI    S
Sbjct: 268 STASFETFPAFSPDGRTLYFCSAEQKEMPVRYKDVKYSLCSIAFHPEDGTFGDRIDTLIS 327

Query: 259 ------MILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLFINI 305
                  I  P+ S +GK  + ++             D++ +DL++ A   L      + 
Sbjct: 328 ARTLDKSISFPKPSFDGKYLMFTLSDYGNFSIWHKEADLWLLDLKTGAYRNLEEVNSDDT 387

Query: 306 S--ASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQ 338
               ++S +S   VF S R      +LY+   +G  +
Sbjct: 388 ESYHNWSSNSHWFVFSSRRGDGLYTRLYISSVDGQGR 424


>gi|292490130|ref|YP_003533025.1| hypothetical protein EAMY_3672 [Erwinia amylovora CFBP1430]
 gi|292901135|ref|YP_003540504.1| hypothetical protein EAM_3448 [Erwinia amylovora ATCC 49946]
 gi|291200983|emb|CBJ48122.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
 gi|291555572|emb|CBA24161.1| Uncharacterized protein yidR [Erwinia amylovora CFBP1430]
          Length = 435

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 20/167 (11%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                          +RLT T       +  +   +   SPD S I F   D  G  QL+
Sbjct: 270 GTATTLPAPPAGVRQKRLTYTSQRPYPGLVTTPRHWLRSSPDGSAIAFLMRDDTGVVQLW 329

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +   G   +++++          W P G  +AF   +     I +          + E 
Sbjct: 330 TVSPQGGSPRQVTRCASDIQSAFSWHPDGRQLAFVCDN----RITLCDVVSGALHRIGER 385

Query: 390 SN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           S       A  +SP G+ + F R   G    +++++ ++ R     +
Sbjct: 386 SEAPPVADAVVFSPDGKRVAFLRDCAGYR--QIFTVQVDQRPRERPS 430



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 56/138 (40%), Gaps = 11/138 (7%)

Query: 212 QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            ++  PR     SP+   +A+   DD  +++++ +  +     +       +  A  +  
Sbjct: 297 GLVTTPRHWLRSSPDGSAIAFLMRDDTGVVQLWTVSPQGGSPRQVTRCASDIQSAFSWHP 356

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREG 324
           +G++            I   D+ S A  R+   +    +  +  +SPD  ++ F  D  G
Sbjct: 357 DGRQLAFVCDN----RITLCDVVSGALHRIGERSEAPPVADAVVFSPDGKRVAFLRDCAG 412

Query: 325 KEQLYVMQSNGSDQKRIS 342
             Q++ +Q +   ++R S
Sbjct: 413 YRQIFTVQVDQRPRERPS 430



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 39/105 (37%), Gaps = 3/105 (2%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G + R +T     I     + P+ +++A+    D  I    ++   + R  +
Sbjct: 327 QLWTVSPQGGSPRQVTRCASDIQSAFSWHPDGRQLAFV--CDNRITLCDVVSGALHRIGE 384

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           R      +  A  FS +GKR            I++V +     ER
Sbjct: 385 R-SEAPPVADAVVFSPDGKRVAFLRDCAGYRQIFTVQVDQRPRER 428


>gi|254417276|ref|ZP_05031020.1| DnaJ domain protein [Microcoleus chthonoplastes PCC 7420]
 gi|196175929|gb|EDX70949.1| DnaJ domain protein [Microcoleus chthonoplastes PCC 7420]
          Length = 473

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 80/236 (33%), Gaps = 22/236 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFR 257
               +        ++    SP+++ V   + D      + L D +  +  + +       
Sbjct: 175 WRCVHTLKGHTYFVYAVAISPDRETVVSGSTDG----TIKLWDVQTGKEQRTLKGHAGRF 230

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINI---SASYSPDS 313
             + +   S +GK  + S   D+ + ++   L +    R LT    +     S + SPD 
Sbjct: 231 GYVQSIAISPDGKMLV-SGGNDKTIKLWQ--LSTGKERRTLTGHSGLFAGIKSVTISPDG 287

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             I   SD    + + +       + R  +   A       SP G +IA +  + +   +
Sbjct: 288 KLIASGSD---DKTIKLWSLAKGRELRTFKGHTAGVNGVAISPDGKIIA-SGSTDKTIKL 343

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             + K      L+     +    +S  G+ +        D   KL+ +  +GR   
Sbjct: 344 WQVGKARELHTLIGHHDTVNGVAFSSDGQIIA---SGSADGTIKLWQLS-SGRILR 395



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 69/205 (33%), Gaps = 14/205 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYL 241
           VSG    ++ +        R        +         SP+ + +A  + D      + L
Sbjct: 246 VSGGNDKTIKLWQLSTGKERRTLTGHSGLFAGIKSVTISPDGKLIASGSDDK----TIKL 301

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                 R  +      + +     S +GK    S   D+ + ++ V  ++     L    
Sbjct: 302 WSLAKGRELRTFKGHTAGVNGVAISPDGKIIA-SGSTDKTIKLWQV-GKARELHTLIGHH 359

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 ++S D   I   S  +G   + + Q +     R  +    +     +SP G ++
Sbjct: 360 DTVNGVAFSSDGQIIASGS-ADGT--IKLWQLSSGRILRTLKGHHDTVNGVAFSPDGQIL 416

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLL 386
           A +  + +   +  ++K G + R L
Sbjct: 417 A-SGSADKTIKLWQVRK-GRKLRTL 439



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 61/212 (28%), Gaps = 35/212 (16%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            V      +L          +LW +   +++  + F    A    +A +    I      
Sbjct: 280 SVTISPDGKLIASGSDDKTIKLWSLAKGREL--RTFKGHTAGVNGVAISPDGKII----- 332

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                            SG    ++ +     A   +        +    FS + Q +A 
Sbjct: 333 ----------------ASGSTDKTIKLWQVGKARELHTLIGHHDTVNGVAFSSDGQIIAS 376

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D      + L      R  + +      +    FS +G + L S   D+ + ++ V 
Sbjct: 377 GSADG----TIKLWQLSSGRILRTLKGHHDTVNGVAFSPDG-QILASGSADKTIKLWQV- 430

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +      L        + + S D   +V  S
Sbjct: 431 RKGRKLRTLKGHAAAVHAVAISLDGQILVSGS 462


>gi|158318222|ref|YP_001510730.1| WD-40 repeat-containing protein [Frankia sp. EAN1pec]
 gi|158113627|gb|ABW15824.1| WD-40 repeat protein [Frankia sp. EAN1pec]
          Length = 780

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 90/269 (33%), Gaps = 19/269 (7%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQ 223
           ++TG + D  S        +++   K+   + D   G  +  L+  +   +    FSP+ 
Sbjct: 491 ALTGHERDVTSAAFSPDGRLLATTSKDGTRLWDTTTGRTVGRLSGRKISAVHGCAFSPDG 550

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             +A    D        + +   +R    +   +  +    FS +G+    +V  D  + 
Sbjct: 551 DLLATTGSDK----TARIWEIATERLALTLAGHKGPVYGCAFSPDGRLLA-TVSTDRTVK 605

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           ++ V   +N    LT         ++SPD   +V      G E   +      +      
Sbjct: 606 LWGVSTGTNIAT-LTGHRGSVYGCAFSPDGRLLV----TAGAESTLLWDVTIGETITSLA 660

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                     +SP G L+A T   G +          +    L    + Q+  +SP G  
Sbjct: 661 GHTNFANGCSFSPDGLLLATTSNDGTRLT-----DTPTGTTTLTLPGSAQSCAFSPDGVL 715

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           L  +   D    ++L+ +       TL  
Sbjct: 716 LATASTDD---TARLWDVATGTAVATLTG 741



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 70/208 (33%), Gaps = 11/208 (5%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R      ++ +    FSP+ + +A  + D   +       T    + ++I          
Sbjct: 489 RVALTGHERDVTSAAFSPDGRLLATTSKDGTRLWDTTTGRTVGRLSGRKISAVHGC---- 544

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G     +   D+   I+ +  +  A   L          ++SPD   +   S  +
Sbjct: 545 AFSPDGDLLATTGS-DKTARIWEIATERLALT-LAGHKGPVYGCAFSPDGRLLATVST-D 601

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +L+ + + G++   ++     S +   +SP G L+           +  +    +  
Sbjct: 602 RTVKLWGVST-GTNIATLT-GHRGSVYGCAFSPDGRLLVTAGAESTL--LWDVTIGETIT 657

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            L    +     ++SP G  L  +    
Sbjct: 658 SLAGHTNFANGCSFSPDGLLLATTSNDG 685


>gi|332666589|ref|YP_004449377.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Haliscomenobacter hydrossis DSM 1100]
 gi|332335403|gb|AEE52504.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 779

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 81/230 (35%), Gaps = 17/230 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N +Y    R+  +    FS + + V      D     + L+D    +  +         
Sbjct: 321 YNPKY-DKPREVSIGGSVFSDDGKAVVSIRALDNKDRWIVLLDLVTGQMKQLDRQHDEAW 379

Query: 261 LAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           +      +  + +      +      +Y++++ +   + LTN  F  +  + S D     
Sbjct: 380 IGGGGMGWLPDNEHLWFQSEATGYSHLYTINVNTGVKKALTNGSFEVLETNLSRDGKTFY 439

Query: 318 FESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIG 374
             +  EG      Y +   G   ++I+  K  +  +   SP    +A    +S + + + 
Sbjct: 440 LTASAEGPHERHFYRLPIAGGKLEKITTLKGGN--EVSLSPDESTLAIRYSYSNQPWELY 497

Query: 375 VM-KKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDG-DTGSKLY 419
            M  + G+    L   ++      P  +P    +++   +DG    ++LY
Sbjct: 498 WMPNRSGAAPLQLTTSTSAAFKTYPWRTP---EIVWFTARDGVKVPARLY 544



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 78/232 (33%), Gaps = 18/232 (7%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--------FSSNGKRAL 273
           ++ +  +   D + +  +Y   T +    K    +      PR        FS +GK A+
Sbjct: 287 DRNRDTFYMVDTKKLEGIYDKPTFLKDYHKGDKPYNPKYDKPREVSIGGSVFSDDGK-AV 345

Query: 274 ISVQKDEAMDIYSV--DLQSNATERLT---NTLFINISAS-YSPDSSQIVFESDREGKEQ 327
           +S++  +  D + V  DL +   ++L    +  +I      + PD+  + F+S+  G   
Sbjct: 346 VSIRALDNKDRWIVLLDLVTGQMKQLDRQHDEAWIGGGGMGWLPDNEHLWFQSEATGYSH 405

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERL 385
           LY +  N   +K ++        +   S  G     T  +          +   G +   
Sbjct: 406 LYTINVNTGVKKALTNGSF-EVLETNLSRDGKTFYLTASAEGPHERHFYRLPIAGGKLEK 464

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           +         + SP   +L              +  + +G     + T   A
Sbjct: 465 ITTLKGGNEVSLSPDESTLAIRYSYSNQPWELYWMPNRSGAAPLQLTTSTSA 516



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 57/160 (35%), Gaps = 13/160 (8%)

Query: 202 NIRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NF 256
           NI  +        F P    +  + + + +      D L            P+++     
Sbjct: 27  NIDQIMLGDRFTGFSPENVFWGEDNKTIYFNWNPTMDTLAALYKVILPTGKPEKVSLEEQ 86

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           R++I    +S +  R + S   D    ++ +++ +   +++TNTL    S  ++ D   +
Sbjct: 87  RNLIGGGVYSRDFSRKVFSRSGD----VFLLEVATGKVQQITNTLDNEGSPRFTGDEKGL 142

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            + S       LY+  S      +++  K      P   P
Sbjct: 143 TWVS----NNNLYLWDSATGSITQLTNFKGGQATRPAAKP 178


>gi|148657484|ref|YP_001277689.1| protein kinase [Roseiflexus sp. RS-1]
 gi|148569594|gb|ABQ91739.1| protein kinase [Roseiflexus sp. RS-1]
          Length = 1242

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 77/226 (34%), Gaps = 11/226 (4%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG     + + + +   +          ++   FSP+       ++D      + L +  
Sbjct: 899  SGGGDRVIRLWEIENGRVICKLEGHTLAVYSVVFSPDGHYALSGSWDK----TIRLWEVA 954

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              R   R     + + +  FS +G+   IS   DE + ++  D  +           +  
Sbjct: 955  TGREVNRFDRHVNFVNSVAFSPDGRYI-ISAGWDETIRLW--DTTTGHEMYCLKDTDVIW 1011

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S  +SPD   I+  S+ +G  +L+       +                +SP G   A + 
Sbjct: 1012 SVCFSPDGLYILSGSE-DGSVKLW--DIKTREVIHRFTGLSDRIHCVAFSPDGRY-ALSG 1067

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             SG    I  +       +L V +  +   T+SP GR ++      
Sbjct: 1068 SSGGMVMIWDVGTRRVVHQLSVNNRWVTPTTFSPDGRYILIGSDDG 1113



 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 108/322 (33%), Gaps = 35/322 (10%)

Query: 132  DVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR--ILFVSESVVSGI 188
            DV   + + +G++     +  R  AH    DI +      G   ++  + F++   V G 
Sbjct: 810  DVLFAELLRMGQQHVKEKSFLR--AH----DILRQAQDVPGYERNKDVLQFLTLCRVQGG 863

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                 C   R+G  +  L    D I     FSP+ +              + L +    R
Sbjct: 864  G---YCRNIRNGWCVYCLDEHTDSIASV-AFSPDGR----YALSGGGDRVIRLWEIENGR 915

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
               ++      + +  FS +G    +S   D+ + ++ V        R    +    S +
Sbjct: 916  VICKLEGHTLAVYSVVFSPDGHY-ALSGSWDKTIRLWEV-ATGREVNRFDRHVNFVNSVA 973

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPD   I+        E + +  +    +    +D +  +    +SP G  I  +    
Sbjct: 974  FSPDGRYII---SAGWDETIRLWDTTTGHEMYCLKDTDVIWSVC-FSPDGLYIL-SGSED 1028

Query: 369  EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-------DTGSKLYSI 421
                +  +K      R       +    +SP GR    S    G        T   ++ +
Sbjct: 1029 GSVKLWDIKTREVIHRFTGLSDRIHCVAFSPDGRY-ALSGSSGGMVMIWDVGTRRVVHQL 1087

Query: 422  DLNGRNETLINTPAYASDPQWV 443
             +N R  T      ++ D +++
Sbjct: 1088 SVNNRWVTPTT---FSPDGRYI 1106



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 53/289 (18%), Positives = 101/289 (34%), Gaps = 26/289 (8%)

Query: 137 KQIIGKKFFSSPASWRKIAHTISDD----IYQSITGEKGDFNSRILFVSES-VVSGIIKN 191
           ++I+ K+     A  R  AHT  D           G  G  NS          +SG    
Sbjct: 512 EEILEKRGVKDEALRR--AHTAPDRPVGREVHCFKGHTGVVNSVAFSPDGRYALSGSSDG 569

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++ + D             D+++ E  F  N Q +              L DTR D   +
Sbjct: 570 TVRLWDVASGKEVRKVQGYDELVSEVAFLANGQII-----MARSKDGAILWDTRTDEVHR 624

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYS 310
               ++   L   F    +R  ++  +D ++ ++  D+ +     R         SA++S
Sbjct: 625 ----YKGGNLE--FFDESERYALATCEDGSVRLW--DVTTKQEVRRFGRHDGTVYSATFS 676

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD + ++      G   L + +     + R         F   +SP G+ +  +    + 
Sbjct: 677 PDKNHVL---SGGGDNILRLWEVETGKEVRHFVGHSHWVFSVTFSPDGEYVL-SGSGDQT 732

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             I  +K  G + R    +  + +  +SP+GR  + S         ++Y
Sbjct: 733 VRIWEVKT-GRELRCFRHEGAVFSVAFSPNGRYALSSSHDRTIRVWEVY 780



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 76/241 (31%), Gaps = 35/241 (14%)

Query: 112 VTGRVIKEGKDRLRVE------FRLWDVKDRKQI-----------------IGKKFFSSP 148
           V   V      R  +        RLWDV   K++                  G+   +  
Sbjct: 549 VVNSVAFSPDGRYALSGSSDGTVRLWDVASGKEVRKVQGYDELVSEVAFLANGQIIMARS 608

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
                +  T +D++++   G    F+    +   +   G ++    + D           
Sbjct: 609 KDGAILWDTRTDEVHRYKGGNLEFFDESERYALATCEDGSVR----LWDVTTKQEVRRFG 664

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             D  ++   FSP++  V            + L +    +  +        + +  FS +
Sbjct: 665 RHDGTVYSATFSPDKNHV----LSGGGDNILRLWEVETGKEVRHFVGHSHWVFSVTFSPD 720

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+  L S   D+ + I+ V  ++    R         S ++SP+       S  +   ++
Sbjct: 721 GEYVL-SGSGDQTVRIWEV--KTGRELRCFRHEGAVFSVAFSPNGRY-ALSSSHDRTIRV 776

Query: 329 Y 329
           +
Sbjct: 777 W 777



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/213 (11%), Positives = 67/213 (31%), Gaps = 50/213 (23%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER------------------ 296
               ++ +  FS +G+   +S   D  + ++  D+ S    R                  
Sbjct: 545 GHTGVVNSVAFSPDGRY-ALSGSSDGTVRLW--DVASGKEVRKVQGYDELVSEVAFLANG 601

Query: 297 ----------------LTN--TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                            T+    +   +  +  +S +    +  +G  +L+        +
Sbjct: 602 QIIMARSKDGAILWDTRTDEVHRYKGGNLEFFDESERYALATCEDGSVRLW--DVTTKQE 659

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPT 396
            R     + + +   +SP  + +      G    + + + +  +E    +     + + T
Sbjct: 660 VRRFGRHDGTVYSATFSPDKNHVL---SGGGDNILRLWEVETGKEVRHFVGHSHWVFSVT 716

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +SP G  ++      GD   +++ +   GR   
Sbjct: 717 FSPDGEYVL---SGSGDQTVRIWEVK-TGRELR 745



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 64/227 (28%), Gaps = 39/227 (17%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      R  +        RLWD     ++   K                D I+     
Sbjct: 971  SVAFSPDGRYIISAGWDETIRLWDTTTGHEMYCLKDT--------------DVIWSVCFS 1016

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              G +          ++SG    S+ + D     + +        +    FSP+ +    
Sbjct: 1017 PDGLY----------ILSGSEDGSVKLWDIKTREVIHRFTGLSDRIHCVAFSPDGR---- 1062

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                      V + D    R   ++      +    FS +G+  LI    D  + +  V+
Sbjct: 1063 YALSGSSGGMVMIWDVGTRRVVHQLSVNNRWVTPTTFSPDGRYILI-GSDDGTLQL--VN 1119

Query: 289  LQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             Q     R+         S + S D         ++   +++ +  +
Sbjct: 1120 TQEGNAARVFKGHTDWVFSIAISIDGQY-ALSGSKDQTIRVWALDWD 1165


>gi|327351314|gb|EGE80171.1| WD domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
          Length = 1615

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 80/254 (31%), Gaps = 24/254 (9%)

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             F+ +   + +     +    + V+   D  N   LT        +  FSP+ Q +  + 
Sbjct: 921  VFSPKKSIIRQQFWDHLPPWIMDVVSAEDDWNPSLLTLEHSDSARQMLFSPDGQLLISSD 980

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             D            R       I  F + +     S +GK    S   D  + ++ V + 
Sbjct: 981  LDMPKAWDTTTGVNRGAFPDISISLFGTDLRKMALSPDGKSLACSSAFDNNIRLWDVKM- 1039

Query: 291  SNATERLTN--TLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGS--------DQK 339
                   T         S ++SP    +   S DR     + +  +           ++K
Sbjct: 1040 --VLVLCTFEGHTARVDSIAFSPSGECVASTSRDR----CIRIWDTKTGRSKILFNRERK 1093

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWS 398
             ++  K       V+ P GD IA      +   + +      +    L     +   ++S
Sbjct: 1094 LVTASKYDDPTGVVFCPNGDFIA---GYTDNHQVRIWDTKTYNPLGTLTHSHQILTMSFS 1150

Query: 399  PSGRSLIFSRKKDG 412
            P G+ +  S   DG
Sbjct: 1151 PDGKFIA-SSSSDG 1163



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 80/228 (35%), Gaps = 30/228 (13%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
               Q +    FSP+   +A  +        V L D +  R    +    S +L+ +FS N
Sbjct: 1226 DNAQAIAYITFSPDSGLIAAVS-----GKYVKLFDPQARRLCGLLEGHTSDVLSVKFSPN 1280

Query: 269  GKRALISVQKDEAMDIYSVDLQSN----ATERLTNTLFINISASYSPDSSQIVFESDREG 324
            GK    S   D ++ ++   +           +T   FI    S       + + SD   
Sbjct: 1281 GKLVA-SSSCDNSVKLWDA-VNFGIPEINETHITKLKFIGNGHSI------LSYLSDETA 1332

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                 V++   +  +  +     S+ D V  SP  +++A+T    +   +  M       
Sbjct: 1333 -----VLRDPSTSMRTFTVPGYISFHDKVECSPLNNILAYT--DDDTINLWNMVTGRFYA 1385

Query: 384  RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             L   DS +    +SP GRSL  + +        +   D+  +    +
Sbjct: 1386 SLGGTDSAVTTIAFSPDGRSLAAAYQDHP-----IIIWDITKKKRRFV 1428



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 45/145 (31%), Gaps = 14/145 (9%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
             SP    +AY   D      + L +    R    +G   S +    FS +G+    + Q 
Sbjct: 1358 CSPLNNILAYTDDDT-----INLWNMVTGRFYASLGGTDSAVTTIAFSPDGRSLAAAYQ- 1411

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 I   D+       +      ++    +S D   +V +S       +++      +
Sbjct: 1412 --DHPIIIWDITKKKRRFVLRGDLRDVQKLLFSFDGRLLVADSM---YSSVWLWDLTTGE 1466

Query: 338  QKRISQDKEASYFDPVWSPQGDLIA 362
               + Q K  S      S    +I 
Sbjct: 1467 PLGVVQGKTISAM--TVSSDAKVII 1489


>gi|294140789|ref|YP_003556767.1| prolyl oligopeptidase family protein [Shewanella violacea DSS12]
 gi|293327258|dbj|BAJ01989.1| prolyl oligopeptidase family protein [Shewanella violacea DSS12]
          Length = 674

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 89/253 (35%), Gaps = 26/253 (10%)

Query: 220 SPNQQKVAYA----TYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           S +   + +       + +    +Y+ D T+ D  PK+I +         FS++ +    
Sbjct: 35  SNDGNSIVFGIKKFDAEGKASSDLYIKDLTKKDSKPKQITSAAGTEHNAVFSADDQSVYF 94

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FESDREGKEQLYVMQ 332
              ++ +  +Y + L      ++++          S D  Q+V       E K+      
Sbjct: 95  LASRNGSTQVYQLPLTGGEALQVSDLPLDVEGFKLSQDGKQVVLNMRVFPECKDLKCSKD 154

Query: 333 SNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLV 387
              ++  R S  +E           WS       F    +GE     V    G       
Sbjct: 155 KFTAEAARKSTGREYKQLMIRHWDTWSDHSRSHLFVAQLNGENITTAVDVTAGLDTETPP 214

Query: 388 ED-SNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNG--------RNETLINT 433
           +  S ++  T++P G+ +++S K         T   L+ + + G         N+     
Sbjct: 215 KPFSGMEEVTFTPDGKYVVYSAKAPSKEQAWTTNYDLWQVPVTGGDGVNLTESNKAWDAH 274

Query: 434 PAYASDPQWVGFM 446
           P Y++D +++ ++
Sbjct: 275 PTYSADGRYLAYL 287



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/316 (12%), Positives = 93/316 (29%), Gaps = 69/316 (21%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRFSPNQ 223
             T    D NS +  + +    G   + L + D    + +     S         FS + 
Sbjct: 30  YSTTLSNDGNSIVFGIKKFDAEGKASSDLYIKDLTKKDSKPKQITSAAGTEHNAVFSADD 89

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--------- 274
           Q V +    +    +VY +         ++ +    +   + S +GK+ ++         
Sbjct: 90  QSVYFLASRNGST-QVYQLPL-TGGEALQVSDLPLDVEGFKLSQDGKQVVLNMRVFPECK 147

Query: 275 -------------------------------SVQKDEAMDIYSVDLQSNATER---LTNT 300
                                          +        ++   L          +T  
Sbjct: 148 DLKCSKDKFTAEAARKSTGREYKQLMIRHWDTWSDHSRSHLFVAQLNGENITTAVDVTAG 207

Query: 301 LFINISA---------SYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQKRISQD 344
           L               +++PD   +V+ +    KEQ +    +       G D   +++ 
Sbjct: 208 LDTETPPKPFSGMEEVTFTPDGKYVVYSAKAPSKEQAWTTNYDLWQVPVTGGDGVNLTES 267

Query: 345 KEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--W 397
            +A    P +S  G  +A+       F  +++ I +      QE+ +    +  A +  +
Sbjct: 268 NKAWDAHPTYSADGRYLAYLAMKKPGFEADRYRIMLRDTVTGQEKEVAPLWDRSASSMIF 327

Query: 398 SPSGRSLIFSRKKDGD 413
               R+L  + +  G 
Sbjct: 328 GKDNRTLYVTAQDVGQ 343



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 62/184 (33%), Gaps = 8/184 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G +            +      L  +   G +   LT S       P +S + 
Sbjct: 222 EVTFTPDGKYVVYSAKAPSKEQAWTTNYDLWQVPVTGGDGVNLTESNKAWDAHPTYSADG 281

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D  R+ L DT   +  +    +     +  F  + +   ++ Q  
Sbjct: 282 RYLAYLAMKKPGFEADRYRIMLRDTVTGQEKEVAPLWDRSASSMIFGKDNRTLYVTAQDV 341

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
             + I+ V+ Q    + +      +I       + +I+F +    +   L+ +  +G D 
Sbjct: 342 GQVSIFEVNTQFGDVKTIYTEGSNSIVGV---TADKIIFNNKSLVQPGDLHSINFDGQDL 398

Query: 339 KRIS 342
           ++++
Sbjct: 399 QKLT 402


>gi|73668996|ref|YP_305011.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
 gi|72396158|gb|AAZ70431.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
          Length = 581

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 75/200 (37%), Gaps = 12/200 (6%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEAMDIYSVDLQSNAT 294
             +++  T    +P  I   R        + +  G + +    ++   DIY  DL +   
Sbjct: 20  FLIFVSSTASSASPSAITETRITNHGTASNPDIYGDKIVWQDNRNGNWDIYIFDLSTKIE 79

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
              T      I+ +   +   +V+E +R G   +YV   +   Q  IS+   A   +P  
Sbjct: 80  IH-TTNKTDQINPAIYKN--LVVWEDERNGGHDIYVEDLSTKIQTCISKSGMA--HNPAI 134

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD- 413
              G+ I +         + +      +E  +        P+   +   +++  ++DGD 
Sbjct: 135 --YGNRIVWQDERNGSSNLYMYDLSTKKETQITTSGKAFYPSIYDN--RIVWQDERDGDY 190

Query: 414 TGSKLYSIDLNGRNETLINT 433
               +Y  DL+ + ET I+T
Sbjct: 191 RHPDIYMYDLSNKKETKIST 210



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 98/262 (37%), Gaps = 25/262 (9%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + + D       + T   DQI   P      + +     +      +Y+ D    
Sbjct: 64  NGNWDIYIFDLSTKIEIHTTNKTDQIN--PAI---YKNLVVWEDERNGGHDIYVEDLST- 117

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              +   +   M   P     G R +   +++ + ++Y  DL +    ++T +       
Sbjct: 118 -KIQTCISKSGMAHNPAIY--GNRIVWQDERNGSSNLYMYDLSTKKETQITTSGK----- 169

Query: 308 SYSPD--SSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           ++ P    ++IV++ +R+G      +Y+   +   + +IS  K         +  G+ + 
Sbjct: 170 AFYPSIYDNRIVWQDERDGDYRHPDIYMYDLSNKKETKISTTKFTIGGHYSPTIYGNRVV 229

Query: 363 FTKFSGEK---FAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +   + +    + I VM     ++ ++++ ++ +  P     G  +++S    GD    +
Sbjct: 230 WVGATTDYDYIYGIYVMDLSTKKQNIILKSTDEIGNPKI--YGDDIVYSLAMTGDGFPDI 287

Query: 419 YSIDLNGRNETLINTPAYASDP 440
           Y  +L+      I+T   A +P
Sbjct: 288 YMYNLSTSERKKISTSQTAKEP 309



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 12/106 (11%)

Query: 338 QKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           + RI+    AS      +P   GD I +       + I +       E      ++   P
Sbjct: 38  ETRITNHGTAS------NPDIYGDKIVWQDNRNGNWDIYIFDLSTKIEIHTTNKTDQINP 91

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
               +   +++  +++G  G  +Y  DL+ + +T I+    A +P 
Sbjct: 92  AIYKN--LVVWEDERNG--GHDIYVEDLSTKIQTCISKSGMAHNPA 133


>gi|16331137|ref|NP_441865.1| beta transducin-like-protein [Synechocystis sp. PCC 6803]
 gi|3024893|sp|P74442|Y143_SYNY3 RecName: Full=Uncharacterized WD repeat-containing protein slr0143
 gi|1653631|dbj|BAA18543.1| beta transducin-like protein [Synechocystis sp. PCC 6803]
          Length = 1191

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 70/187 (37%), Gaps = 12/187 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     ++ + D DG N+          ++   FSP+ + +A  + D      V L   R
Sbjct: 618 TAGQDQTVKIWDLDG-NLLQTLKGHQDSVYSVSFSPDGEILASTSRDR----TVRLWHWR 672

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +    +G     +   +FS +G+  + SV +D  + ++  DL  N   +         
Sbjct: 673 SGKTLAVLGGHTKSVDDAQFSPDGQTLV-SVCRDGQIRLW--DLDGNLIRQFGLPEVAFF 729

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++ P+ + +   +D +G  +L+       + K      +      V++P G  +  + 
Sbjct: 730 GVNWHPNGNLLAVAAD-DGTVRLWT---PQGEIKATLSGHDEFVTRVVFTPDGKQLFSSS 785

Query: 366 FSGEKFA 372
            +G    
Sbjct: 786 SNGSVIH 792



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 13/206 (6%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           + Y     L               +   R  + +   SS  K  + S  +D  + +++  
Sbjct: 532 SQYPATSPLVSLQQILSQIAEKNVLTGHRDGVTSVAISS-HKNLIASASRDGTVHLWT-- 588

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            Q       T          +SP+           G++Q   +     +  +  +  + S
Sbjct: 589 PQGEFLREFTGHTGSIYRVDFSPNGKIFA----TAGQDQTVKIWDLDGNLLQTLKGHQDS 644

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            +   +SP G+++A T        +   +   +   L     ++    +SP G++L+ S 
Sbjct: 645 VYSVSFSPDGEILASTSRD-RTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDGQTLV-SV 702

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTP 434
            +DG    +L+  DL+G        P
Sbjct: 703 CRDGQ--IRLW--DLDGNLIRQFGLP 724


>gi|310820072|ref|YP_003952430.1| prolyl oligopeptidase family protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309393144|gb|ADO70603.1| Prolyl oligopeptidase family protein [Stigmatella aurantiaca
           DW4/3-1]
          Length = 646

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 78/222 (35%), Gaps = 11/222 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+ + ++V + +  D                  R+   +  +     + +G+  LI   K
Sbjct: 57  FTRDGKQVLFVSSRDGLPQVYRADAASPTSPATRLLASKERVTLVDTTPDGQSLLILSDK 116

Query: 279 --DEAMDIYSVDLQSNATERLTNTLFINISASYSPD--SSQIVFESDR--EGKEQLYVMQ 332
             DE   I+ V L  +A   LT    +N   ++ PD     I F   R  E    +Y + 
Sbjct: 117 GADENWSIWKVGLDGSAPVELTPGETMNRDTAFLPDLAPDTIYFSGRRMNEAASTVYAIP 176

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDS 390
           + G   + I +D +  +   V S  G    F ++  + E + + +    G    L     
Sbjct: 177 ATGGPSRVIYRDDKPGFLTHV-SRDGQQGLFVRYPSASENYLLHIDLASGKTRPLFPASG 235

Query: 391 NLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +      +SP GR++  S    G+    L      G+    
Sbjct: 236 KVSIFGAQFSPDGRTVYVSTDGGGEQSWLLALESATGKELAR 277



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 21/170 (12%)

Query: 295 ERLTN--TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASYF 350
            ++T     F+N  A ++ D  Q++F S R+G  Q+Y   +    S   R+   KE    
Sbjct: 41  RQVTPYVDAFVNSEALFTRDGKQVLFVSSRDGLPQVYRADAASPTSPATRLLASKER-VT 99

Query: 351 DPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRS 403
               +P G  +      G  E ++I  +  DGS    L     +       P  +P   +
Sbjct: 100 LVDTTPDGQSLLILSDKGADENWSIWKVGLDGSAPVELTPGETMNRDTAFLPDLAPD--T 157

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLI---NTPAY----ASDPQWVGFM 446
           + FS ++  +  S +Y+I   G    +I   + P +    + D Q   F+
Sbjct: 158 IYFSGRRMNEAASTVYAIPATGGPSRVIYRDDKPGFLTHVSRDGQQGLFV 207



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 8/188 (4%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSPDSSQI 316
           +     F+ +GK+ L    +D    +Y  D    ++   RL  +         +PD   +
Sbjct: 51  VNSEALFTRDGKQVLFVSSRDGLPQVYRADAASPTSPATRLLASKERVTLVDTTPDGQSL 110

Query: 317 VFESDREG--KEQLYVMQSNGSDQKRISQD---KEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +  SD+       ++ +  +GS    ++        + F P  +P     +  + +    
Sbjct: 111 LILSDKGADENWSIWKVGLDGSAPVELTPGETMNRDTAFLPDLAPDTIYFSGRRMNEAAS 170

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +  +   G   R++  D      T  S  G+  +F R         L+    +G+   L
Sbjct: 171 TVYAIPATGGPSRVIYRDDKPGFLTHVSRDGQQGLFVRYPSASENYLLHIDLASGKTRPL 230

Query: 431 INTPAYAS 438
                  S
Sbjct: 231 FPASGKVS 238


>gi|115377542|ref|ZP_01464742.1| prolyl oligopeptidase family protein, putative [Stigmatella
           aurantiaca DW4/3-1]
 gi|115365482|gb|EAU64517.1| prolyl oligopeptidase family protein, putative [Stigmatella
           aurantiaca DW4/3-1]
          Length = 674

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 78/222 (35%), Gaps = 11/222 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+ + ++V + +  D                  R+   +  +     + +G+  LI   K
Sbjct: 85  FTRDGKQVLFVSSRDGLPQVYRADAASPTSPATRLLASKERVTLVDTTPDGQSLLILSDK 144

Query: 279 --DEAMDIYSVDLQSNATERLTNTLFINISASYSPD--SSQIVFESDR--EGKEQLYVMQ 332
             DE   I+ V L  +A   LT    +N   ++ PD     I F   R  E    +Y + 
Sbjct: 145 GADENWSIWKVGLDGSAPVELTPGETMNRDTAFLPDLAPDTIYFSGRRMNEAASTVYAIP 204

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDS 390
           + G   + I +D +  +   V S  G    F ++  + E + + +    G    L     
Sbjct: 205 ATGGPSRVIYRDDKPGFLTHV-SRDGQQGLFVRYPSASENYLLHIDLASGKTRPLFPASG 263

Query: 391 NLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +      +SP GR++  S    G+    L      G+    
Sbjct: 264 KVSIFGAQFSPDGRTVYVSTDGGGEQSWLLALESATGKELAR 305



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 21/170 (12%)

Query: 295 ERLTN--TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASYF 350
            ++T     F+N  A ++ D  Q++F S R+G  Q+Y   +    S   R+   KE    
Sbjct: 69  RQVTPYVDAFVNSEALFTRDGKQVLFVSSRDGLPQVYRADAASPTSPATRLLASKER-VT 127

Query: 351 DPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRS 403
               +P G  +      G  E ++I  +  DGS    L     +       P  +P   +
Sbjct: 128 LVDTTPDGQSLLILSDKGADENWSIWKVGLDGSAPVELTPGETMNRDTAFLPDLAPD--T 185

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLI---NTPAY----ASDPQWVGFM 446
           + FS ++  +  S +Y+I   G    +I   + P +    + D Q   F+
Sbjct: 186 IYFSGRRMNEAASTVYAIPATGGPSRVIYRDDKPGFLTHVSRDGQQGLFV 235



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 8/188 (4%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSPDSSQI 316
           +     F+ +GK+ L    +D    +Y  D    ++   RL  +         +PD   +
Sbjct: 79  VNSEALFTRDGKQVLFVSSRDGLPQVYRADAASPTSPATRLLASKERVTLVDTTPDGQSL 138

Query: 317 VFESDREG--KEQLYVMQSNGSDQKRISQD---KEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +  SD+       ++ +  +GS    ++        + F P  +P     +  + +    
Sbjct: 139 LILSDKGADENWSIWKVGLDGSAPVELTPGETMNRDTAFLPDLAPDTIYFSGRRMNEAAS 198

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +  +   G   R++  D      T  S  G+  +F R         L+    +G+   L
Sbjct: 199 TVYAIPATGGPSRVIYRDDKPGFLTHVSRDGQQGLFVRYPSASENYLLHIDLASGKTRPL 258

Query: 431 INTPAYAS 438
                  S
Sbjct: 259 FPASGKVS 266


>gi|251791663|ref|YP_003006384.1| hypothetical protein Dd1591_4109 [Dickeya zeae Ech1591]
 gi|247540284|gb|ACT08905.1| conserved hypothetical protein [Dickeya zeae Ech1591]
          Length = 427

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 58/160 (36%), Gaps = 22/160 (13%)

Query: 279 DEAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQL 328
                            RLT T       +      +   SPD SQI F   D  G  QL
Sbjct: 273 GGTETELPAPPAGVRQRRLTFTADRPYPGVVNQPRHWLRSSPDGSQIAFLMKDDRGVVQL 332

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++  NG + ++ +Q          W P G+ +AF        ++ + +      RL  +
Sbjct: 333 WMVSPNGGEPRQATQGDWPVQSAFSWHPDGEYLAFI----GDNSVMLCEAATG--RLTRQ 386

Query: 389 DSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +  + P       +SP+G  + + R+ DG     + ++ 
Sbjct: 387 TARSETPPVADAVVFSPNGDRIAYLREIDGCNQIFVVTVS 426



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 58/146 (39%), Gaps = 15/146 (10%)

Query: 200 GANIRYLTPSRD----QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           G   R LT + D     ++ +PR     SP+  ++A+   DD  +++++++        +
Sbjct: 285 GVRQRRLTFTADRPYPGVVNQPRHWLRSSPDGSQIAFLMKDDRGVVQLWMVSPNGGEPRQ 344

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISAS 308
                  +  A  +  +G+             +   +  +    R T    T  +  +  
Sbjct: 345 ATQGDWPVQSAFSWHPDGEYLAFI----GDNSVMLCEAATGRLTRQTARSETPPVADAVV 400

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSN 334
           +SP+  +I +  + +G  Q++V+  +
Sbjct: 401 FSPNGDRIAYLREIDGCNQIFVVTVS 426



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 34/101 (33%), Gaps = 7/101 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++  +G   R  T     +     + P+ + +A+          V L +    R  +
Sbjct: 331 QLWMVSPNGGEPRQATQGDWPVQSAFSWHPDGEYLAFI-----GDNSVMLCEAATGRLTR 385

Query: 252 RIGNF--RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +        +  A  FS NG R     + D    I+ V + 
Sbjct: 386 QTARSETPPVADAVVFSPNGDRIAYLREIDGCNQIFVVTVS 426


>gi|160887956|ref|ZP_02068959.1| hypothetical protein BACUNI_00360 [Bacteroides uniformis ATCC 8492]
 gi|156862455|gb|EDO55886.1| hypothetical protein BACUNI_00360 [Bacteroides uniformis ATCC 8492]
          Length = 491

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 77/242 (31%), Gaps = 43/242 (17%)

Query: 141 GKKFFSSPASWRKIAHT----ISDDIYQSITGEK--GDFNSRILFVSESVVSGIIK---- 190
           G    +     RK+A      IS  +Y     +   G F+S ++       S        
Sbjct: 201 GGTVLNRDGKLRKLALKNEQMISAAVYGDFHPDGRYGVFSSNVIIPMFHTESNRRLEVYD 260

Query: 191 --NSLCVMDRDGANIRY--LTPSRDQILFEPRFSPNQQKVAYAT----------YDDEDI 236
             + L V D DG  +    LT     +   P FS + + + Y +                
Sbjct: 261 TVSDLAVADFDGNRMILSPLTADSTVLETFPTFSADGKWIYYCSAPTVPLPDSVQQLRYS 320

Query: 237 LRVYLMDTRIDRAPKRIGNF------RSMILAPRFSSNGKRALISVQKDEAMDIY----- 285
           L     D        R+         +  +  P+ S +G+  L +V       I+     
Sbjct: 321 LCRIAFDANHGAWGDRVDTLWNARLEKGSVCHPKASPDGRYLLYTVADYGTFPIWHRETE 380

Query: 286 --SVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNGSD 337
              +DLQ+ A + L   N+   +   S+S  S    F S R     G+     + + G  
Sbjct: 381 LQLMDLQTGAIDSLPMVNSSRSDTYHSWSSGSRWFAFASKRGDGQYGRVYFAYLDAEGKA 440

Query: 338 QK 339
            K
Sbjct: 441 HK 442



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 66/232 (28%), Gaps = 64/232 (27%)

Query: 265 FSSNGKRALISVQK----------------DEAMDIYSVDLQSNA--TERLT-NTLFINI 305
           F  +G+  + S                   D   D+   D   N      LT ++  +  
Sbjct: 230 FHPDGRYGVFSSNVIIPMFHTESNRRLEVYDTVSDLAVADFDGNRMILSPLTADSTVLET 289

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK------RISQDKEASYFD-------- 351
             ++S D   I + S          +    S Q+      RI+ D     +         
Sbjct: 290 FPTFSADGKWIYYCSAP-------TVPLPDSVQQLRYSLCRIAFDANHGAWGDRVDTLWN 342

Query: 352 ----------PVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGS---QERLLVEDSN 391
                     P  SP G  + +T      F I        +M           ++    +
Sbjct: 343 ARLEKGSVCHPKASPDGRYLLYTVADYGTFPIWHRETELQLMDLQTGAIDSLPMVNSSRS 402

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLY--SIDLNGRNETLINTPAYASDPQ 441
               +WS   R   F+ K+      ++Y   +D  G+       P   SDP+
Sbjct: 403 DTYHSWSSGSRWFAFASKRGDGQYGRVYFAYLDAEGKAHKPFVLP--QSDPE 452



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 22/107 (20%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFS-------------- 367
           G+    V+  +G  +K   ++++  ++     + P G    F+                 
Sbjct: 198 GEGGGTVLNRDGKLRKLALKNEQMISAAVYGDFHPDGRYGVFSSNVIIPMFHTESNRRLE 257

Query: 368 --GEKFAIGVMKKDGSQERL--LVEDSNL--QAPTWSPSGRSLIFSR 408
                  + V   DG++  L  L  DS +    PT+S  G+ + +  
Sbjct: 258 VYDTVSDLAVADFDGNRMILSPLTADSTVLETFPTFSADGKWIYYCS 304


>gi|298242843|ref|ZP_06966650.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
            44963]
 gi|297555897|gb|EFH89761.1| transcriptional regulator, XRE family [Ktedonobacter racemifer DSM
            44963]
          Length = 1188

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 96/307 (31%), Gaps = 38/307 (12%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             RLW+V+  + +  +         R +A   S D                     ++ SG
Sbjct: 887  LRLWEVETGRSL--RTLRGHQNRVRTVA--YSQD-------------------GFTIASG 923

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                ++ + D    +   +  +   ++    FS +   +A A++D    L V +      
Sbjct: 924  SEDETVRLWDARTGHCLRILRAHTHLVRSVVFSADGSLLASASHD----LTVCVWVVATG 979

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINIS 306
            +  +RI      I    F    ++       D  + ++  D ++    R  T       +
Sbjct: 980  QLLRRIEGITGYIWKVAFHPVTRQLA-CGTDDPVIRLW--DSETGEVVREFTGHTHRVWA 1036

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              +SPD   +   SD      L V         RI            + P G L+A T  
Sbjct: 1037 IEFSPDGRYLASCSD---DLTLRVWDVASGACLRIMDGHTGWVRTLAFHPDGTLLA-TGS 1092

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              +   +  ++           +  + + T+ P G  L        D   KL+ +     
Sbjct: 1093 HDQTIRLWEVQTGRCLAVWRGHEGWIWSVTFRPGGAQLASCSD---DGTIKLWDVASGAC 1149

Query: 427  NETLINT 433
              TL +T
Sbjct: 1150 TRTLRST 1156



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 77/238 (32%), Gaps = 17/238 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    +L + + +              +    +S +   +A  + D+     V L D R
Sbjct: 880  SGSEDRTLRLWEVETGRSLRTLRGHQNRVRTVAYSQDGFTIASGSEDE----TVRLWDAR 935

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 + +     ++ +  FS++G     S   D  + ++ V        R+        
Sbjct: 936  TGHCLRILRAHTHLVRSVVFSADGSLLA-SASHDLTVCVWVV-ATGQLLRRIEGITGYIW 993

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              ++ P + Q+   +D      + +  S   +  R         +   +SP G  +A   
Sbjct: 994  KVAFHPVTRQLACGTD---DPVIRLWDSETGEVVREFTGHTHRVWAIEFSPDGRYLASCS 1050

Query: 366  FSGEKFAIGVMK-KDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +   + V     G+  R++      ++   + P G  L        D   +L+ +
Sbjct: 1051 ---DDLTLRVWDVASGACLRIMDGHTGWVRTLAFHPDGTLLATGSH---DQTIRLWEV 1102



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 74/254 (29%), Gaps = 31/254 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ V+  D A          + +    FSP+ + +A  + D      V L +  
Sbjct: 586 AGTTVGTIHVLRTDDATPVLTCSGHSEEIRSLAFSPDGRYLASGSEDH----TVRLWEVE 641

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +   R  +    FS +G+         E   IY  D      E + +     +
Sbjct: 642 SGACQHILHGHRDQVRTVAFSPDGRYVA---SAGEDRLIYLWDAFYGHVESVLDGHSQRV 698

Query: 306 -SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  + P    +    D      + +                 +     +SP G L+A  
Sbjct: 699 RSLVFHPSLPLLASTGDET---TVRLWDYEQGAHVATLAGPSQAGRVVAFSPDGRLLAAG 755

Query: 365 K--------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
                     + +   + V++  GS+ R +          +S     L        D   
Sbjct: 756 SEDHTIRLWRTEDYEQVAVLQGQGSRVRTMH---------FSADSTLLA---SAGDDQML 803

Query: 417 KLYSIDLNGRNETL 430
            L+ +  + R   +
Sbjct: 804 NLWDMASHQRIHQV 817



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 79/270 (29%), Gaps = 53/270 (19%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            L + D       +   +    ++   F PN  ++   + DD     +   D R     + 
Sbjct: 803  LNLWDMASHQRIHQVHAHGSRIWSVVFVPNTTQLISTSEDD----TIRWWDRRSMLCLRT 858

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +  +  ++ A  +S +G   L+S  +D  + ++ V+    +   L        + +YS D
Sbjct: 859  LRGYTDLLKALAYSPDG-HLLLSGSEDRTLRLWEVE-TGRSLRTLRGHQNRVRTVAYSQD 916

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----- 367
               I   S+    E + +  +      RI +         V+S  G L+A          
Sbjct: 917  GFTIASGSE---DETVRLWDARTGHCLRILRAHTHLVRSVVFSADGSLLASASHDLTVCV 973

Query: 368  ----------------------------------GEKFAIGVMKKDGSQERLLVEDSNLQ 393
                                               +   I +   +  +          +
Sbjct: 974  WVVATGQLLRRIEGITGYIWKVAFHPVTRQLACGTDDPVIRLWDSETGEVVREFTGHTHR 1033

Query: 394  APT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
                 +SP GR L        D   +++ +
Sbjct: 1034 VWAIEFSPDGRYLASCSD---DLTLRVWDV 1060



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/175 (11%), Positives = 52/175 (29%), Gaps = 9/175 (5%)

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            V+  +  G     + + D +   +          ++   FSP+ + +A  + D    L +
Sbjct: 1000 VTRQLACGTDDPVIRLWDSETGEVVREFTGHTHRVWAIEFSPDGRYLASCSDD----LTL 1055

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             + D       + +      +    F  +G     +   D+ + ++ V            
Sbjct: 1056 RVWDVASGACLRIMDGHTGWVRTLAFHPDGTLLA-TGSHDQTIRLWEVQ-TGRCLAVWRG 1113

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                  S ++ P  +Q+   SD      + +         R  +         ++
Sbjct: 1114 HEGWIWSVTFRPGGAQLASCSD---DGTIKLWDVASGACTRTLRSTRTYEGTNIY 1165



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 75/226 (33%), Gaps = 10/226 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   +++ + + +    +++       +    FSP+ + VA       +   +YL D  
Sbjct: 628 SGSEDHTVRLWEVESGACQHILHGHRDQVRTVAFSPDGRYVA----SAGEDRLIYLWDAF 683

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +      + +  F       L++   DE         Q      L        
Sbjct: 684 YGHVESVLDGHSQRVRSLVFHP--SLPLLASTGDETTVRLWDYEQGAHVATLAGPSQAGR 741

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++SPD   +   S+      + + ++   +Q  + Q + +      +S    L+A + 
Sbjct: 742 VVAFSPDGRLLAAGSE---DHTIRLWRTEDYEQVAVLQGQGSRVRTMHFSADSTLLA-SA 797

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +   +  M       ++    S + +  + P+   LI + + D
Sbjct: 798 GDDQMLNLWDMASHQRIHQVHAHGSRIWSVVFVPNTTQLISTSEDD 843



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 16/111 (14%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPS 400
            D  A       SP G L+A     G    I V++ D +   L     + +  +  +SP 
Sbjct: 566 NDSFAWILCLAVSPDGRLLAAGTTVGT---IHVLRTDDATPVLTCSGHSEEIRSLAFSPD 622

Query: 401 GRSLIFSRKKDGDTGSKLYSID-------LNGRNETLINTPAYASDPQWVG 444
           GR L        D   +L+ ++       L+G  +  + T A++ D ++V 
Sbjct: 623 GRYLA---SGSEDHTVRLWEVESGACQHILHGHRDQ-VRTVAFSPDGRYVA 669


>gi|270295662|ref|ZP_06201863.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274909|gb|EFA20770.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 486

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 77/242 (31%), Gaps = 43/242 (17%)

Query: 141 GKKFFSSPASWRKIAHT----ISDDIYQSITGEK--GDFNSRILFVSESVVSGIIK---- 190
           G    +     RK+A      IS  +Y     +   G F+S ++       S        
Sbjct: 196 GGTVLNRDGKLRKLALKNEQMISAAVYGDFHPDGRYGVFSSNVIIPMFHTESNRRLEVYD 255

Query: 191 --NSLCVMDRDGANIRY--LTPSRDQILFEPRFSPNQQKVAYAT----------YDDEDI 236
             + L V D DG  +    LT     +   P FS + + + Y +                
Sbjct: 256 TVSDLAVADFDGNRMILSPLTADSTVLETFPTFSADGKWIYYCSAPTVPLPDSVQQLRYS 315

Query: 237 LRVYLMDTRIDRAPKRIGNF------RSMILAPRFSSNGKRALISVQKDEAMDIY----- 285
           L     D        R+         +  +  P+ S +G+  L +V       I+     
Sbjct: 316 LCRIAFDANHGAWGDRVDTLWNARLEKGSVCHPKASPDGRYLLYTVADYGTFPIWHRETE 375

Query: 286 --SVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNGSD 337
              +DLQ+ A + L   N+   +   S+S  S    F S R     G+     + + G  
Sbjct: 376 LQLMDLQTGAIDSLPMVNSSRSDTYHSWSSGSRWFAFASKRGDGQYGRVYFAYLDAEGKA 435

Query: 338 QK 339
            K
Sbjct: 436 HK 437



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 66/232 (28%), Gaps = 64/232 (27%)

Query: 265 FSSNGKRALISVQK----------------DEAMDIYSVDLQSNA--TERLT-NTLFINI 305
           F  +G+  + S                   D   D+   D   N      LT ++  +  
Sbjct: 225 FHPDGRYGVFSSNVIIPMFHTESNRRLEVYDTVSDLAVADFDGNRMILSPLTADSTVLET 284

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK------RISQDKEASYFD-------- 351
             ++S D   I + S          +    S Q+      RI+ D     +         
Sbjct: 285 FPTFSADGKWIYYCSAP-------TVPLPDSVQQLRYSLCRIAFDANHGAWGDRVDTLWN 337

Query: 352 ----------PVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGS---QERLLVEDSN 391
                     P  SP G  + +T      F I        +M           ++    +
Sbjct: 338 ARLEKGSVCHPKASPDGRYLLYTVADYGTFPIWHRETELQLMDLQTGAIDSLPMVNSSRS 397

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLY--SIDLNGRNETLINTPAYASDPQ 441
               +WS   R   F+ K+      ++Y   +D  G+       P   SDP+
Sbjct: 398 DTYHSWSSGSRWFAFASKRGDGQYGRVYFAYLDAEGKAHKPFVLP--QSDPE 447



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 22/107 (20%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFS-------------- 367
           G+    V+  +G  +K   ++++  ++     + P G    F+                 
Sbjct: 193 GEGGGTVLNRDGKLRKLALKNEQMISAAVYGDFHPDGRYGVFSSNVIIPMFHTESNRRLE 252

Query: 368 --GEKFAIGVMKKDGSQERL--LVEDSNL--QAPTWSPSGRSLIFSR 408
                  + V   DG++  L  L  DS +    PT+S  G+ + +  
Sbjct: 253 VYDTVSDLAVADFDGNRMILSPLTADSTVLETFPTFSADGKWIYYCS 299


>gi|317478649|ref|ZP_07937804.1| hypothetical protein HMPREF1007_00920 [Bacteroides sp. 4_1_36]
 gi|316905160|gb|EFV26959.1| hypothetical protein HMPREF1007_00920 [Bacteroides sp. 4_1_36]
          Length = 491

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 77/242 (31%), Gaps = 43/242 (17%)

Query: 141 GKKFFSSPASWRKIAHT----ISDDIYQSITGEK--GDFNSRILFVSESVVSGIIK---- 190
           G    +     RK+A      IS  +Y     +   G F+S ++       S        
Sbjct: 201 GGTVLNRDGKLRKLALKNEQMISAAVYGDFHPDGRYGVFSSNVIIPMFHTESNRRLEVYD 260

Query: 191 --NSLCVMDRDGANIRY--LTPSRDQILFEPRFSPNQQKVAYAT----------YDDEDI 236
             + L V D DG  +    LT     +   P FS + + + Y +                
Sbjct: 261 TVSDLAVADFDGNRMILSPLTADSTVLETFPTFSADGKWIYYCSAPTVPLPDSVQQLRYS 320

Query: 237 LRVYLMDTRIDRAPKRIGNF------RSMILAPRFSSNGKRALISVQKDEAMDIY----- 285
           L     D        R+         +  +  P+ S +G+  L +V       I+     
Sbjct: 321 LCRIAFDANHGAWGDRVDTLWNARLEKGSVCHPKASPDGRYLLYTVADYGTFPIWHRETE 380

Query: 286 --SVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNGSD 337
              +DLQ+ A + L   N+   +   S+S  S    F S R     G+     + + G  
Sbjct: 381 LQLMDLQTGAIDSLPMVNSSRSDTYHSWSSGSRWFAFASKRGDGQYGRVYFAYLDAEGKA 440

Query: 338 QK 339
            K
Sbjct: 441 HK 442



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 66/232 (28%), Gaps = 64/232 (27%)

Query: 265 FSSNGKRALISVQK----------------DEAMDIYSVDLQSNA--TERLT-NTLFINI 305
           F  +G+  + S                   D   D+   D   N      LT ++  +  
Sbjct: 230 FHPDGRYGVFSSNVIIPMFHTESNRRLEVYDTVSDLAVADFDGNRMILSPLTADSTVLET 289

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK------RISQDKEASYFD-------- 351
             ++S D   I + S          +    S Q+      RI+ D     +         
Sbjct: 290 FPTFSADGKWIYYCSAP-------TVPLPDSVQQLRYSLCRIAFDANHGAWGDRVDTLWN 342

Query: 352 ----------PVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGS---QERLLVEDSN 391
                     P  SP G  + +T      F I        +M           ++    +
Sbjct: 343 ARLEKGSVCHPKASPDGRYLLYTVADYGTFPIWHRETELQLMDLQTGAIDSLPMVNSSRS 402

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLY--SIDLNGRNETLINTPAYASDPQ 441
               +WS   R   F+ K+      ++Y   +D  G+       P   SDP+
Sbjct: 403 DTYHSWSSGSRWFAFASKRGDGQYGRVYFAYLDAEGKAHKPFVLP--QSDPE 452



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 22/107 (20%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFS-------------- 367
           G+    V+  +G  +K   ++++  ++     + P G    F+                 
Sbjct: 198 GEGGGTVLNRDGKLRKLALKNEQMISAAVYGDFHPDGRYGVFSSNVIIPMFHTESNRRLE 257

Query: 368 --GEKFAIGVMKKDGSQERL--LVEDSNL--QAPTWSPSGRSLIFSR 408
                  + V   DG++  L  L  DS +    PT+S  G+ + +  
Sbjct: 258 VYDTVSDLAVADFDGNRMILSPLTADSTVLETFPTFSADGKWIYYCS 304


>gi|262382555|ref|ZP_06075692.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295433|gb|EEY83364.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 489

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 70/194 (36%), Gaps = 35/194 (18%)

Query: 195 VMDRDGANIRYLT----PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL--------- 241
           V+  D      ++     +++     P FSP+ + + + T +   +   Y          
Sbjct: 260 VVVYDTEKHEIISTPAIRTKEAFETFPTFSPDGRTLYFCTAEARSMPHEYSEVKYNLCSI 319

Query: 242 --------MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-------MDIYS 286
                     + ID       N +S+   PR S +GK  L ++             D+Y 
Sbjct: 320 AFDPVTRSFASEIDTLYNVRENGKSVSF-PRVSPDGKFLLFTLSGYGNFSIWHKDADLYI 378

Query: 287 VDLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDR-EG---KEQLYVMQSNGSDQKR 340
           +D++S     L N    +     S+S +S  IVF S R +G   +     +  +G+  K 
Sbjct: 379 LDIESGFFHPLRNANSTDTESYHSWSSNSRWIVFSSRRIDGLYTRPYFAYIDESGNASKP 438

Query: 341 ISQDKEASYFDPVW 354
               ++ + F   +
Sbjct: 439 FLLPQKDTDFYHRF 452



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/245 (19%), Positives = 83/245 (33%), Gaps = 63/245 (25%)

Query: 199 DGANIRYLTPSRDQ---ILFEPRFSPNQQKVAYA------TYDDEDILRVYLMDTRIDR- 248
           DG  I  L    +Q    L  P + P+ + VA++      ++   D  RV + D++ D  
Sbjct: 202 DGDKIEKLNTKTEQTISPLVYPSWHPSGKYVAFSVNQTSQSFHSNDKNRVEVFDSQSDVV 261

Query: 249 ----------APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
                     +   I    +    P FS +G+            +  S+  + +  +   
Sbjct: 262 VYDTEKHEIISTPAIRTKEAFETFPTFSPDGRTLYFCT-----AEARSMPHEYSEVK--- 313

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              +   S ++ P     V  S     + LY ++ NG            S   P  SP G
Sbjct: 314 ---YNLCSIAFDP-----VTRSFASEIDTLYNVRENGK-----------SVSFPRVSPDG 354

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-------------TWSPSGRSLI 405
             + FT      F+I     D     +L  +S    P             +WS + R ++
Sbjct: 355 KFLLFTLSGYGNFSIWHKDAD---LYILDIESGFFHPLRNANSTDTESYHSWSSNSRWIV 411

Query: 406 FSRKK 410
           FS ++
Sbjct: 412 FSSRR 416



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 72/216 (33%), Gaps = 59/216 (27%)

Query: 263 PRFSSNGKRALISVQK-------DEAMDIYSVDLQS------NATERLTNTLFI------ 303
           P +  +GK    SV +       ++   +   D QS           + +T  I      
Sbjct: 223 PSWHPSGKYVAFSVNQTSQSFHSNDKNRVEVFDSQSDVVVYDTEKHEIISTPAIRTKEAF 282

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               ++SPD   + F        +   M    S+ K        +     + P       
Sbjct: 283 ETFPTFSPDGRTLYFC-----TAEARSMPHEYSEVK-------YNLCSIAFDP-----VT 325

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-----SKL 418
             F+ E   +  ++++G              P  SP G+ L+F+    G+       + L
Sbjct: 326 RSFASEIDTLYNVRENGKSV---------SFPRVSPDGKFLLFTLSGYGNFSIWHKDADL 376

Query: 419 YSIDL-NGRNETLINTP--------AYASDPQWVGF 445
           Y +D+ +G    L N          +++S+ +W+ F
Sbjct: 377 YILDIESGFFHPLRNANSTDTESYHSWSSNSRWIVF 412


>gi|288925164|ref|ZP_06419099.1| cytochrome c binding protein [Prevotella buccae D17]
 gi|288337929|gb|EFC76280.1| cytochrome c binding protein [Prevotella buccae D17]
          Length = 475

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 71/231 (30%), Gaps = 48/231 (20%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQK----------------DEAMDIYSVDLQSNAT- 294
           R  +    ++ P +  +G+    S                   D++ D++     ++   
Sbjct: 198 RNDSLHGSMVYPYWHPSGRYCTYSTNATHQSFHAVRSKRIEVFDQSSDVFVYRPDTHELL 257

Query: 295 --ERLTNTLFINISASYSPDSSQIVFESDREG---------KEQLYVMQSN---GSDQKR 340
              +L           +SPD   + F S R           +  +  +  +   G    R
Sbjct: 258 LAPQLMTADHYETYPVFSPDGRTLYFCSSRAEPIPACYREVRYNICRVSFDPATGRFGSR 317

Query: 341 ISQDKEA-----SYFDPVWSPQGDLIAFTKFSGEKFAI-------GVMKKDGSQERLLVE 388
           +     A     S   P  S  G  + FT      F I        ++     +   +  
Sbjct: 318 VDTLFNARVLGKSATHPRPSYDGRFLMFTMSDYGCFPIWHREADNWLLDLSTGRAHPMTA 377

Query: 389 DSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYS--IDLNGRNETLINTP 434
            ++    +   WS + R ++F+ ++     ++LY   ID  GR       P
Sbjct: 378 ANSPDTDSWHNWSANSRWVVFTSRRGDGLYTRLYIAHIDRRGRVSKPFLLP 428


>gi|283856467|ref|YP_163143.2| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Zymomonas mobilis subsp. mobilis ZM4]
 gi|283775471|gb|AAV90032.2| peptidase S9B dipeptidylpeptidase IV domain protein [Zymomonas
           mobilis subsp. mobilis ZM4]
          Length = 733

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 82/249 (32%), Gaps = 63/249 (25%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           ++ R   R+G    ++    +S +GK  L+ +  D    +Y   L   + +++T+T    
Sbjct: 96  KMRRERARVGGSLGIVSY-NWSPDGKTILVPLDGD----LYLASLD-GSVQQVTHTAATE 149

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------- 353
           + A  S     + F  D    + L+V+    + ++ +SQD   S                
Sbjct: 150 VDAQVSATGHYLSFVRD----QNLFVIDLKNNQEQALSQDGGGSLTWGSAEFVAQEEMSR 205

Query: 354 -----WSPQGDLIAFTKFSGEKFAI------------------------------GVMKK 378
                WSP    +A  +    +  I                               +M  
Sbjct: 206 TKGHWWSPDDSRLAVARVDESQVHIVTRAAIGANGTQTYQQRYPMAGTPNAKVELYLMNP 265

Query: 379 DGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           DGS++  +   +N         WSP  +SL   R+        L  +D +     L+ + 
Sbjct: 266 DGSRKVKVDLGNNDDIYLARVNWSPDSQSLYVQRESRDQQRLDLLKVDSHTGQSQLLFSE 325

Query: 435 AYASDPQWV 443
              S   W+
Sbjct: 326 TSKS---WI 331



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 63/194 (32%), Gaps = 37/194 (19%)

Query: 251 KRIGNFRSMILAPR---FSSNGKRALISVQKDE---AMDIYSVDLQSNATERLTNTLFIN 304
           +   +      APR    S +G+ A +   + +     D++++D  +  +  L ++  + 
Sbjct: 27  RVFASPSLSGSAPRSLSLSPDGRYATLLRSRPDDLNRYDLWAIDTTTGESRMLIDSKKVG 86

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             A  S                     ++    ++R             WSP G  I   
Sbjct: 87  SGAEIS---------------------EAEKMRRERARVGGSLGIVSYNWSPDGKTILV- 124

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                   + +   DGS +++    +       S +G  L F R ++      L+ IDL 
Sbjct: 125 ---PLDGDLYLASLDGSVQQVTHTAATEVDAQVSATGHYLSFVRDQN------LFVIDLK 175

Query: 425 GRNETLINTPAYAS 438
              E  ++     S
Sbjct: 176 NNQEQALSQDGGGS 189



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 85/274 (31%), Gaps = 53/274 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRV-----------------------------YLMDTRIDR 248
            +SP+  ++A A  D+  +  V                             YLM+    R
Sbjct: 210 WWSPDDSRLAVARVDESQVHIVTRAAIGANGTQTYQQRYPMAGTPNAKVELYLMNPDGSR 269

Query: 249 APKR-IGNFRSMILA-PRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             K  +GN   + LA   +S + +   +    +  + +D+  VD  +  ++ L    F  
Sbjct: 270 KVKVDLGNNDDIYLARVNWSPDSQSLYVQRESRDQQRLDLLKVDSHTGQSQLL----FSE 325

Query: 305 ISASYSP--------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            S S+              +++ S+R G   LY  Q        ++Q    +        
Sbjct: 326 TSKSWINLNNDLQILKDDSLIWASERSGYRHLYHWQK--GKWTTLTQGDWMTLGVVGLDQ 383

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +  L+ F           +   D    S+ R L E               L+  R     
Sbjct: 384 KKGLLYFLANKSTPIEQHLYVIDYHHPSEPRQLTEAGWYNNAVMDKGANRLLIGRSNTSQ 443

Query: 414 TGSKLYSIDLNGRNETLINTPA-YASDPQWVGFM 446
              ++Y  D  G+  + I      A  P +  ++
Sbjct: 444 P-PQVYLADTKGKRLSWIEENKLNARHP-YAPYL 475


>gi|218442470|ref|YP_002380791.1| hypothetical protein PCC7424_5394 [Cyanothece sp. PCC 7424]
 gi|218175241|gb|ACK73972.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 1247

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/218 (19%), Positives = 91/218 (41%), Gaps = 19/218 (8%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            P     +++  F+P+ + +   + D      V L         K     ++ +L+   S 
Sbjct: 1001 PEHQNRVWQIAFTPDSRMLVSGSGD----YSVKLWSIPRGFCLKTFEGHQAWVLSVAVSP 1056

Query: 268  NGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            NGK    S  +D  + ++S+ D  + + +          S ++SP+   I   SD    +
Sbjct: 1057 NGKLIA-SGSEDRTIKLWSIEDDTTQSLQTFEGHQGRIWSVAFSPNDELIASASD----D 1111

Query: 327  QLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ER 384
            +   + S    Q   S ++  S+ +   +SP G L+A      +   I ++  +  Q +R
Sbjct: 1112 KTVKIWSIKEGQLIYSFEEYQSWIWSVAFSPDGKLLA---SGEDNATIRLLNVETGQCDR 1168

Query: 385  LLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            LL     ++++  +SP G+ L  + +   D   KL+++
Sbjct: 1169 LLSKHTRSVKSVCFSPDGQMLASASE---DGTIKLWNV 1203



 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 89/243 (36%), Gaps = 23/243 (9%)

Query: 186  SGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            SG    ++ +        +YL         ++   FSP+ Q +A  + D      + L  
Sbjct: 807  SGSGDKTIKLWSVTQQKYQYLDTLKGHKNWIWSIAFSPDGQYLASGSED----FTMRLWS 862

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                +  +    + + + +  FS N +  L S   D ++ ++S+        ++      
Sbjct: 863  VETKKCLQSFQGYGNRLSSIAFSPNSQYIL-SGSIDRSIRLWSI-KNHECLRQIKGHTNW 920

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLI 361
              S  +SPD   ++  S   G + + +      +     Q+K+     +    S  G  I
Sbjct: 921  VCSVVFSPDGKTLMSGS---GDQTIRLWSIESGEVINTLQEKDDWVLLYQIAVSSNGQYI 977

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            A T  +     I +     ++E+L+      + +    ++P  R L+      GD   KL
Sbjct: 978  ASTSHNNT---IKLWSL-TNKEKLIFAPEHQNRVWQIAFTPDSRMLV---SGSGDYSVKL 1030

Query: 419  YSI 421
            +SI
Sbjct: 1031 WSI 1033



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 78/237 (32%), Gaps = 13/237 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ +   +     +      + +    FS + Q +A  + D      V +    
Sbjct: 723 TGSEDKTIKIWSVETGECLHTLEGHLERIGGVAFSHDDQLLASGSADK----TVKIWSVE 778

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ-SNATERLTNTLFIN 304
                  +   +  +    FS +G+    S   D+ + ++SV  Q     + L       
Sbjct: 779 TGECLHTLKGHQDWVWQVAFSPDGQLLA-SGSGDKTIKLWSVTQQKYQYLDTLKGHKNWI 837

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPD   +   S+      + +         +  Q          +SP    I   
Sbjct: 838 WSIAFSPDGQYLASGSE---DFTMRLWSVETKKCLQSFQGYGNRLSSIAFSPNSQYILSG 894

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   +  +K      ++    + + +  +SP G++L+      GD   +L+SI
Sbjct: 895 SID-RSIRLWSIKNHECLRQIKGHTNWVCSVVFSPDGKTLM---SGSGDQTIRLWSI 947



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 61/179 (34%), Gaps = 10/179 (5%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                    +     SPN + +A  + D    ++++ ++    ++ +     +  I +  F
Sbjct: 1041 TFEGHQAWVLSVAVSPNGKLIASGSED--RTIKLWSIEDDTTQSLQTFEGHQGRIWSVAF 1098

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S N    + S   D+ + I+S+  +               S ++SPD   +   S  +  
Sbjct: 1099 SPN-DELIASASDDKTVKIWSI-KEGQLIYSFEEYQSWIWSVAFSPDGKLLA--SGED-N 1153

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + ++        R+      S     +SP G ++A     G    I +      + +
Sbjct: 1154 ATIRLLNVETGQCDRLLSKHTRSVKSVCFSPDGQMLASASEDGT---IKLWNVGTGECQ 1209



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 55/142 (38%), Gaps = 13/142 (9%)

Query: 157  TISDDIYQSITGEKGDFNSRILFVSES-----VVSGIIKNSLCVMDRDGANIRYLTPSRD 211
            +I DD  QS+   +G    RI  V+ S     + S     ++ +       + Y      
Sbjct: 1074 SIEDDTTQSLQTFEG-HQGRIWSVAFSPNDELIASASDDKTVKIWSIKEGQLIYSFEEYQ 1132

Query: 212  QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++   FSP+ + +A      ED   + L++    +  + +      + +  FS +G+ 
Sbjct: 1133 SWIWSVAFSPDGKLLA----SGEDNATIRLLNVETGQCDRLLSKHTRSVKSVCFSPDGQM 1188

Query: 272  ALISVQKDEAMDIYSVDLQSNA 293
               S  +D  + ++  ++ +  
Sbjct: 1189 LA-SASEDGTIKLW--NVGTGE 1207


>gi|284039353|ref|YP_003389283.1| peptidase S9B dipeptidylpeptidase IV domain protein [Spirosoma
           linguale DSM 74]
 gi|283818646|gb|ADB40484.1| peptidase S9B dipeptidylpeptidase IV domain protein [Spirosoma
           linguale DSM 74]
          Length = 739

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 97/267 (36%), Gaps = 47/267 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMD---------------TRIDRAPKRIGNFRSMILAP 263
           +SP+ + +A+   D+ ++    L D                       RIG       A 
Sbjct: 208 WSPDSKFIAFWQSDEREVPIYKLTDYKGFDEKFDSLPYPRVGDKNPTVRIGVIEIANKAK 267

Query: 264 RF----------------SSNGKRALISVQKDEA-MDIYSVDLQSNATERLT---NTLFI 303
           ++                S  G+ AL+ + + +  + ++  + ++   +++    +T ++
Sbjct: 268 QWMKVDLGDGYIPRIYWTSQEGQLALMHLNRKQNHLRLFMANARTGDAQQIMEEKSTTWV 327

Query: 304 NISASYS--------PDS-SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           ++   ++        P    +  + SDR+G   LY     G     ++  K    +    
Sbjct: 328 DVFDFFAGINHLIYFPAGVREFYWVSDRDGFAHLYRYDYTGKLLNAVTSGKWEVSYVHHI 387

Query: 355 SPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            P+   + FT    S  +  + V+  DG  +R L       A  +SP+G+  I  R  + 
Sbjct: 388 DPKTKKVYFTSTEASPLERQLFVIDVDGKNKRRLTTVPGKHAVNFSPNGQYFI-DRYSNI 446

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASD 439
            T +++   D  G+    + T    SD
Sbjct: 447 STPTQVELRDTKGQLIKALETNKKVSD 473



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 35/162 (21%)

Query: 298 TNTLFINISASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           T+  F   S  +S DS  I+F+S+      R G    YV        K +++D + +   
Sbjct: 93  TDKAFTYGSFQWSKDSKNILFQSNFRPVYRRSGISDYYVYAVADKSLKLVAKDAQTAEL- 151

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED------------------SNLQ 393
              +P G  + + +       + V      +E  L +D                     Q
Sbjct: 152 ---APDGSKVGYER----GGNLFVFNFATQKETQLTDDAKAAFYNGRFGWAYEEEFGLAQ 204

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLY-SIDLNGRNETLINTP 434
           A  WSP  + + F   +  +    +Y   D  G +E   + P
Sbjct: 205 AWDWSPDSKFIAF--WQSDEREVPIYKLTDYKGFDEKFDSLP 244



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 20/183 (10%), Positives = 56/183 (30%), Gaps = 39/183 (21%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRAPK 251
           +  DG+ +++    +       ++S + + + + +          +  Y +    D++ K
Sbjct: 81  VVFDGSQLKFPGTDKAFTYGSFQWSKDSKNILFQSNFRPVYRRSGISDYYVYAVADKSLK 140

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +            + +G +       +   +++  +  +    +LT             
Sbjct: 141 LVAK---DAQTAELAPDGSKVGY----ERGGNLFVFNFATQKETQLT------------- 180

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D ++  F + R G                  +++        WSP    IAF +    + 
Sbjct: 181 DDAKAAFYNGRFGWAY---------------EEEFGLAQAWDWSPDSKFIAFWQSDEREV 225

Query: 372 AIG 374
            I 
Sbjct: 226 PIY 228



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 62/200 (31%), Gaps = 27/200 (13%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L   D  G  +  +T  + ++ +     P  +KV + + +   + R   +     +  +R
Sbjct: 361 LYRYDYTGKLLNAVTSGKWEVSYVHHIDPKTKKVYFTSTEASPLERQLFVIDVDGKNKRR 420

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERL-TNTLFINISAS-- 308
           +        A  FS NG+  +             + D +    + L TN    +  AS  
Sbjct: 421 LTTVPGK-HAVNFSPNGQYFIDRYSNISTPTQVELRDTKGQLIKALETNKKVSDYVASHG 479

Query: 309 YSP---------DSSQIVFESDRE---------GKEQLYVMQSNGSDQKRISQDKEASYF 350
           YSP         D  QI    D            K+   VM   G    +   ++ A+  
Sbjct: 480 YSPKELTHFTTTDGQQI----DISIIKPIDFDPNKKYPVVMDIYGGPGAQSVYNEFATTG 535

Query: 351 DPVWSPQGDLIAFTKFSGEK 370
              W  Q   I     +   
Sbjct: 536 WHQWLAQTGYIVVGVNNRGS 555


>gi|186685825|ref|YP_001869021.1| protein kinase [Nostoc punctiforme PCC 73102]
 gi|186468277|gb|ACC84078.1| protein kinase [Nostoc punctiforme PCC 73102]
          Length = 631

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 99/309 (32%), Gaps = 24/309 (7%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQI--IGKKFFSSPASWRKIAHT-ISDDIYQSITGEK 170
           G+ I  G +   +  +LW +   K +  +G+      +    +A + IS  +  S  GE 
Sbjct: 327 GQFIASGSNDHTI--KLWQLGTGKLVRQMGRWSSGHSSMVNSVAFSPISAKL--SYQGES 382

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G            + SG   N++ + D +              +    FSP+ + +   +
Sbjct: 383 GKSTGSADLNWGMLASGSWDNTIKLWDINTGKEIRTLTGHTNWVNSVAFSPDGKFLVSGS 442

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS--------NGKRALISVQKDEAM 282
            D      + L         + +      + +  +S           ++ + S   D  +
Sbjct: 443 AD----CTIKLWQVNTGIEIQTLTGHSDSVSSIAYSPRTATTTNSQDRQLVASGSNDYTI 498

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++ V         LT   F     ++S D+  I   S   G   + +   N   + R  
Sbjct: 499 KLWQV-YTGRNIYTLTGHSFFINCIAFSHDAEMIASGS---GDNTIKLWHVNTGKEIRTL 554

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                S +   +S     +A   +      +  +        L    S ++   +SP G+
Sbjct: 555 IGHSDSVWSVAFSQDRQFLASASWDNT-IKLWHLHSGREISTLTGHSSYVRCVAFSPDGQ 613

Query: 403 SLIFSRKKD 411
           +L+     D
Sbjct: 614 TLVSGSDDD 622



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 80/274 (29%), Gaps = 40/274 (14%)

Query: 199 DGANIR--YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D  N +          ++     SP+ Q +A  + D    L        + +  +     
Sbjct: 301 DQQNWQCLQTLRGHSSMVHAIAISPDGQFIASGSNDHTIKLWQLGTGKLVRQMGRWSSGH 360

Query: 257 RSMILAPRFSS----------NGKR---------ALISVQKDEAMDIYSVDLQSNATERL 297
            SM+ +  FS           +GK           L S   D  + ++ ++        L
Sbjct: 361 SSMVNSVAFSPISAKLSYQGESGKSTGSADLNWGMLASGSWDNTIKLWDIN-TGKEIRTL 419

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T       S ++SPD   +V  S       + + Q N   + +       S     +SP+
Sbjct: 420 TGHTNWVNSVAFSPDGKFLVSGS---ADCTIKLWQVNTGIEIQTLTGHSDSVSSIAYSPR 476

Query: 358 G--------DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                      +  +  +     +  +    +   L      +    +S     +     
Sbjct: 477 TATTTNSQDRQLVASGSNDYTIKLWQVYTGRNIYTLTGHSFFINCIAFSHDAEMIA---S 533

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             GD   KL+ ++      TLI      SD  W 
Sbjct: 534 GSGDNTIKLWHVNTGKEIRTLIGH----SDSVWS 563



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/186 (10%), Positives = 59/186 (31%), Gaps = 24/186 (12%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            +    ++D +  +  + +    SM+ A   S +G+    S   D  + ++ +       
Sbjct: 293 KLPPPVVLDQQNWQCLQTLRGHSSMVHAIAISPDGQFIA-SGSNDHTIKLWQL-GTGKLV 350

Query: 295 ERLTN----TLFINISASYSPDSSQIVFESDRE-----------------GKEQLYVMQS 333
            ++         +  S ++SP S+++ ++ +                       + +   
Sbjct: 351 RQMGRWSSGHSSMVNSVAFSPISAKLSYQGESGKSTGSADLNWGMLASGSWDNTIKLWDI 410

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           N   + R             +SP G  +  +  +     +  +      + L     ++ 
Sbjct: 411 NTGKEIRTLTGHTNWVNSVAFSPDGKFLV-SGSADCTIKLWQVNTGIEIQTLTGHSDSVS 469

Query: 394 APTWSP 399
           +  +SP
Sbjct: 470 SIAYSP 475


>gi|309791374|ref|ZP_07685884.1| WD40 domain-containing protein [Oscillochloris trichoides DG6]
 gi|308226581|gb|EFO80299.1| WD40 domain-containing protein [Oscillochloris trichoides DG6]
          Length = 1100

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 88/270 (32%), Gaps = 64/270 (23%)

Query: 211 DQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLMDTRIDRAPKR 252
           +     P  S + + +A+ +                  YD + ++   +      +    
Sbjct: 110 NNASSNPAISTDGRFIAFESDASNLVSSDTNRKGDIFVYDRQSVITTRVSVATGGQQGND 169

Query: 253 IGNFRSMILAPRFSSNGKRA--------LISVQKDEAMDIYSVDLQSNATERLT------ 298
              F S    P  S +G+          L+S   +   DI+  D Q+  TER++      
Sbjct: 170 PSGFGSADFFPAISGDGRYVTFVSHSSNLVSGDTNGRPDIFIHDRQTVITERISVATGGA 229

Query: 299 NTLFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            +   +  +S S D   + F+S        D  GK  ++V        +R+S   +    
Sbjct: 230 QSNDWSDQSSISADGRYVAFDSGASNLVSGDTNGKSDIFVRDRQTGVTERVSIASDGEQG 289

Query: 351 D-----PVWSPQGDLIAFTK--------FSGEKFAIGVMKKDG-SQERL------LVEDS 390
           +     P  S  G  +AF           +  K  + V  +   + ER+         + 
Sbjct: 290 NNYSDFPAISADGRFVAFISAATNLVSNDTNGKIDVFVYDRQTATTERISVSAIGTQANE 349

Query: 391 NLQAPTWSPSGRSLIF----SRKKDGDTGS 416
           +   P  S  GR + F    S    GDT +
Sbjct: 350 DSNYPDISADGRFVTFHSLASSLVGGDTNA 379



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 53/299 (17%), Positives = 91/299 (30%), Gaps = 65/299 (21%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-------DDEDILRVYLMDTRI 246
            V    G              F P  S + + V + ++       D      +++ D R 
Sbjct: 157 RVSVATGGQQGNDPSGFGSADFFPAISGDGRYVTFVSHSSNLVSGDTNGRPDIFIHD-RQ 215

Query: 247 DRAPKRIGNFRSMILAPRF------SSNGKRALI--------SVQKDEAMDIYSVDLQSN 292
               +RI        +  +      S++G+            S   +   DI+  D Q+ 
Sbjct: 216 TVITERISVATGGAQSNDWSDQSSISADGRYVAFDSGASNLVSGDTNGKSDIFVRDRQTG 275

Query: 293 ATERLT------NTLFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQ 338
            TER++           +   + S D   + F S        D  GK  ++V     +  
Sbjct: 276 VTERVSIASDGEQGNNYSDFPAISADGRFVAFISAATNLVSNDTNGKIDVFVYDRQTATT 335

Query: 339 KRIS-----QDKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLVEDS 390
           +RIS              P  S  G  + F   +          V        +++  D 
Sbjct: 336 ERISVSAIGTQANEDSNYPDISADGRFVTFHSLASSLVGGDTNAVGDVFIRDRQMVSTDI 395

Query: 391 NLQAP-----------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-----NETLINT 433
              AP           + S  GR + FS + +      L S D NG+      E ++NT
Sbjct: 396 ISVAPPYWGNGVSGFASISADGRFVAFSSEAN-----NLVSGDTNGKMDIFIRERVVNT 449



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/221 (21%), Positives = 72/221 (32%), Gaps = 53/221 (23%)

Query: 254 GNFRSMILAPRFSSNGKRALI--------SVQKDEAMDIYSVDLQSNATERLTNTLFI-- 303
           GN RS +     S +G+  +         S   +   DI+  DLQ+ AT R++       
Sbjct: 49  GNNRSFVFGRSISGDGRYVVFGSEASNMVSGDTNGKSDIFVRDLQTAATIRVSVATGNIQ 108

Query: 304 ----NISASYSPDSSQIVFESDRE--------GKEQLYVMQSNGSDQKRISQDKEA---- 347
               + + + S D   I FESD           K  ++V         R+S         
Sbjct: 109 ANNASSNPAISTDGRFIAFESDASNLVSSDTNRKGDIFVYDRQSVITTRVSVATGGQQGN 168

Query: 348 -------SYFDPVWSPQGDLIAFTKFS--------GEKFAIGVMKKDGS-QERLLVEDSN 391
                  + F P  S  G  + F   S          +  I +  +     ER+ V    
Sbjct: 169 DPSGFGSADFFPAISGDGRYVTFVSHSSNLVSGDTNGRPDIFIHDRQTVITERISVATGG 228

Query: 392 LQAPTW------SPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            Q+  W      S  GR + F         S L S D NG+
Sbjct: 229 AQSNDWSDQSSISADGRYVAFDS-----GASNLVSGDTNGK 264


>gi|253563818|ref|ZP_04841275.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251947594|gb|EES87876.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 492

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 45/211 (21%)

Query: 263 PRFSSNGKRALISVQK-------DEAMDIYSVDLQS-------NATERLTN----TLFIN 304
           P +  +G+    SV K            I   D  S        +   LT     T    
Sbjct: 229 PYWHPSGEYIAYSVNKTNQAFHLGGKKPIEVFDQASDVVVYHPRSHRILTTPLLSTASFE 288

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQS------------NGSDQKRISQDKEA----- 347
              ++SPD   + F S  + +  +                 +G+   RI     A     
Sbjct: 289 TFPAFSPDGRTLYFCSAGQKEMPVRYKDVKYSLCSIAFHPEDGTFGDRIDTLISARTLDK 348

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAI-------GVMKKDGSQERLLVEDSNLQAPT---W 397
           S   P  S  G  + FT      F+I        ++       R L E ++    +   W
Sbjct: 349 SISFPKPSFDGKYLMFTLSDYGNFSIWHKEADLWLLDLKTGTYRNLEEVNSDDTESYHNW 408

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           S +    +FS ++     ++LY   ++G+  
Sbjct: 409 SSNSHWFVFSSRRGDGLYTRLYISSVDGQGR 439



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 53/157 (33%), Gaps = 27/157 (17%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGNFRS 258
           S       P FSP+ + + + +   +++   Y                     RI    S
Sbjct: 283 STASFETFPAFSPDGRTLYFCSAGQKEMPVRYKDVKYSLCSIAFHPEDGTFGDRIDTLIS 342

Query: 259 ------MILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLFINI 305
                  I  P+ S +GK  + ++             D++ +DL++     L      + 
Sbjct: 343 ARTLDKSISFPKPSFDGKYLMFTLSDYGNFSIWHKEADLWLLDLKTGTYRNLEEVNSDDT 402

Query: 306 S--ASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQ 338
               ++S +S   VF S R      +LY+   +G  +
Sbjct: 403 ESYHNWSSNSHWFVFSSRRGDGLYTRLYISSVDGQGR 439


>gi|301308285|ref|ZP_07214239.1| putative Cytochrome c binding protein [Bacteroides sp. 20_3]
 gi|300833755|gb|EFK64371.1| putative Cytochrome c binding protein [Bacteroides sp. 20_3]
          Length = 313

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 82/263 (31%), Gaps = 48/263 (18%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---- 278
            Q + +    +     V   D +I +   +     S +  P +  +G+    SV      
Sbjct: 12  GQMMFHMRAANGGTYIV--QDKKISKLNTKTNGTISNMTYPFWHPSGRYITTSVNDIKQF 69

Query: 279 ------------DEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFES--- 320
                       D   D+   D+++        L          ++SPD   + F +   
Sbjct: 70  FHSVKEKKMEVFDLESDVVVYDVKNKEILSKASLITKDAFETFPAFSPDGKWLYFCTAPA 129

Query: 321 -------DREGKEQLYV-MQSNGSDQK----RISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                  D+       V    +  +       +      SY  P  SP G  + +T+ + 
Sbjct: 130 QKMPENYDKVRYNLCRVAFDPDRGEISFPIDTLVHADSLSYTFPRISPDGRFLMYTETAY 189

Query: 369 EKFAIGVMKKDGSQE----RLLVEDSNLQAP------TWSPSGRSLIFSRKKDGD--TGS 416
            +F I     +        R  ++ S L +P      +WS +   ++FS ++D    T  
Sbjct: 190 GQFPIWHPDAEIRMMDLENRTAMDMSALNSPDTDSYHSWSSNSDWVVFSSRRDNGLYTLP 249

Query: 417 KLYSIDLNGRNETLINTPAYASD 439
            +  I  +G+       P    D
Sbjct: 250 YICYIGKDGKPSKPFLLPQEDPD 272



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 61/177 (34%), Gaps = 33/177 (18%)

Query: 195 VMDRDGANIRYLTP----SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           V+  D  N   L+     ++D     P FSP+ + + + T   + +   Y    R +   
Sbjct: 87  VVVYDVKNKEILSKASLITKDAFETFPAFSPDGKWLYFCTAPAQKMPENY-DKVRYNLCR 145

Query: 251 KRIGNFRSMIL---------------APRFSSNGKRALISVQKDEAMDIY-------SVD 288
                 R  I                 PR S +G+  + +        I+        +D
Sbjct: 146 VAFDPDRGEISFPIDTLVHADSLSYTFPRISPDGRFLMYTETAYGQFPIWHPDAEIRMMD 205

Query: 289 LQSNATERLT--NTLFINISASYSPDSSQIVFESDREGK----EQLYVMQSNGSDQK 339
           L++     ++  N+   +   S+S +S  +VF S R+        +  +  +G   K
Sbjct: 206 LENRTAMDMSALNSPDTDSYHSWSSNSDWVVFSSRRDNGLYTLPYICYIGKDGKPSK 262



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 37/117 (31%), Gaps = 20/117 (17%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--------- 362
           D  Q++F           V     S     +    ++   P W P G  I          
Sbjct: 10  DPGQMMFHMRAANGGTYIVQDKKISKLNTKTNGTISNMTYPFWHPSGRYITTSVNDIKQF 69

Query: 363 FTKFSGEKFAIGVMKKD-----------GSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           F     +K  +  ++ D            S+  L+ +D+    P +SP G+ L F  
Sbjct: 70  FHSVKEKKMEVFDLESDVVVYDVKNKEILSKASLITKDAFETFPAFSPDGKWLYFCT 126


>gi|269796831|ref|YP_003316286.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Sanguibacter
           keddieii DSM 10542]
 gi|269099016|gb|ACZ23452.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Sanguibacter
           keddieii DSM 10542]
          Length = 697

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 55/153 (35%), Gaps = 12/153 (7%)

Query: 265 FSSNGKRALISVQKDEA-----MDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVF 318
            S +G   + ++   EA       + +VD+ +     L +           SPD+  + F
Sbjct: 233 LSPDGTTVVTTINVPEARGAERTVLAAVDVATGTRRTLVDDGASEAHGPQVSPDNQTVAF 292

Query: 319 E--SDREGKEQLYV----MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              S   G E   V    +   G D + ++   +       W P G  +  T  S  +  
Sbjct: 293 VQQSRSSGHEAPRVTLALVDLAGGDVRPLATGWDRWPSSITWLPDGSGLLVTADSDGRGP 352

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +  +  DG+  ++  +D+       SP G ++ 
Sbjct: 353 VFHVTLDGTVTQVTADDATFTDVQVSPDGTTVY 385



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 59/193 (30%), Gaps = 6/193 (3%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+     + + G        + R +   +   + ++      D  + +  ++     G  
Sbjct: 194 LFAADLGELVTGAGATDPRLTLRDLTRDVKTALRETSGVLSPDGTTVVTTINVPEARGAE 253

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-----LRVYLMDT 244
           +  L  +D      R L          P+ SP+ Q VA+             + + L+D 
Sbjct: 254 RTVLAAVDVATGTRRTLVDDGASEAHGPQVSPDNQTVAFVQQSRSSGHEAPRVTLALVDL 313

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                      +     +  +  +G   L++   D    ++ V L      ++T      
Sbjct: 314 AGGDVRPLATGWDRWPSSITWLPDGSGLLVTADSDGRGPVFHVTLD-GTVTQVTADDATF 372

Query: 305 ISASYSPDSSQIV 317
                SPD + + 
Sbjct: 373 TDVQVSPDGTTVY 385



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 15/149 (10%)

Query: 304 NISASYSPDSSQIVFE-----SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             S   SPD + +V       +    +  L  +      ++ +  D  +    P  SP  
Sbjct: 228 ETSGVLSPDGTTVVTTINVPEARGAERTVLAAVDVATGTRRTLVDDGASEAHGPQVSPDN 287

Query: 359 DLIAFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKK 410
             +AF + S           + ++   G   R L    +    + TW P G  L+ +   
Sbjct: 288 QTVAFVQQSRSSGHEAPRVTLALVDLAGGDVRPLATGWDRWPSSITWLPDGSGLLVTADS 347

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASD 439
           DG     ++ + L+G    +    A  +D
Sbjct: 348 DGRGP--VFHVTLDGTVTQVTADDATFTD 374



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 16/99 (16%)

Query: 264 RFSSNGKRALISVQKDEAMD------IYSVDLQSNAT-ERLTNTLFINISASYSPDSSQI 316
             S +G R + SV             ++ VD +      RLT +      A+++PD   +
Sbjct: 32  ALSHDGTRLVTSVSTLSTDSTAYTTALWEVDPRGEQPARRLTRSAKGEGGATFTPDGD-V 90

Query: 317 VFESDR--------EGKEQLYVMQSNGSDQKRISQDKEA 347
           +F S R        E    L+++ ++G + + +S     
Sbjct: 91  LFTSGRPDPQSSDDEATSALWLLPASGGEARVVSSRAGG 129


>gi|192361517|ref|YP_001983726.1| hypothetical protein CJA_3272 [Cellvibrio japonicus Ueda107]
 gi|190687682|gb|ACE85360.1| hypothetical protein CJA_3272 [Cellvibrio japonicus Ueda107]
          Length = 963

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 73/183 (39%), Gaps = 41/183 (22%)

Query: 266 SSNGKRALISVQKDEAMD----------IYSVDLQSNATERLTNT-----LFINISASYS 310
           S +GK+   +++  E  D          I+  D+ S    R+ ++        ++S  Y 
Sbjct: 76  SLDGKKLAFAMRAPEDPDLDEDEQPTWNIWEYDIASKTLRRIIDSNIEAEKGNDVSPRYL 135

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD  +I+F SDR+ +             + I  D+    F  V     DL AF       
Sbjct: 136 PDG-RILFSSDRQKR------------AREILLDEGKPQFGAVNERDNDLTAF------- 175

Query: 371 FAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL--YSIDLNGRN 427
             +  M+ DG+  + L    S+   P+    GR +++ R  DG    +L  Y+++ +G +
Sbjct: 176 -HLHSMRADGTDIQQLTFNQSHDIEPSLLADGR-VLYLRW-DGFATDRLSFYTMNPDGSD 232

Query: 428 ETL 430
              
Sbjct: 233 VQR 235



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 66/205 (32%), Gaps = 58/205 (28%)

Query: 220 SPNQQKVAYATYDDEDI---------LRVYLMDTRIDRAPKRIGN----FRSMILAPRFS 266
           S + +K+A+A    ED            ++  D       + I +     +   ++PR+ 
Sbjct: 76  SLDGKKLAFAMRAPEDPDLDEDEQPTWNIWEYDIASKTLRRIIDSNIEAEKGNDVSPRYL 135

Query: 267 SNGKRALISVQKD-------------------------EAMDIYSVDLQSNATERLTNTL 301
            +G R L S  +                           A  ++S+       ++LT   
Sbjct: 136 PDG-RILFSSDRQKRAREILLDEGKPQFGAVNERDNDLTAFHLHSMRADGTDIQQLTFNQ 194

Query: 302 FINISASYSPDSSQIV-----FESDREGKEQLYVMQSNGSDQKRISQ-----------DK 345
             +I  S   D   +      F +DR      Y M  +GSD +R              D+
Sbjct: 195 SHDIEPSLLADGRVLYLRWDGFATDRL---SFYTMNPDGSDVQRYFGYASLNIANAELDE 251

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEK 370
            A  F P   P G + A   ++  +
Sbjct: 252 TARLFQPQMLPDGRIAAIYMYNQTQ 276


>gi|188535557|ref|YP_001909354.1| Conserved hypothetical protein YidR [Erwinia tasmaniensis Et1/99]
 gi|188030599|emb|CAO98494.1| Conserved hypothetical protein YidR [Erwinia tasmaniensis Et1/99]
          Length = 438

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 58/160 (36%), Gaps = 20/160 (12%)

Query: 279 DEAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQL 328
           +               +RLT T       +  +   +   SPD S I F   D  G+ QL
Sbjct: 275 EGTAMTLPAPPAGVKQKRLTYTDQRAYPGLATTPRHWLRSSPDGSAIAFLMKDDVGRVQL 334

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           + +   G   +++++          W P G  +AF   +    +I V        R + E
Sbjct: 335 WTVSPLGGLPRQVTRCDSDIQSAFSWHPDGRGLAFVYDN----SITVCDIASGALRRISE 390

Query: 389 DSN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            S       A  +SP GR + F R        +++++ ++
Sbjct: 391 RSATPPVADAVVFSPDGRRVAFMRDCADHR--QIFTVRVD 428



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 63/185 (34%), Gaps = 17/185 (9%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +D         +G   +       +  +G+ +  L   D+        TP         R
Sbjct: 264 ADYAIPGQAPLEGTAMT-----LPAPPAGVKQKRLTYTDQRAYPGLATTPRH-----WLR 313

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+   +A+   DD   ++++ +        +       +  A  +  +G+        
Sbjct: 314 SSPDGSAIAFLMKDDVGRVQLWTVSPLGGLPRQVTRCDSDIQSAFSWHPDGRGLAFVYDN 373

Query: 279 DEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                I   D+ S A  R+   + T  +  +  +SPD  ++ F  D     Q++ ++ + 
Sbjct: 374 S----ITVCDIASGALRRISERSATPPVADAVVFSPDGRRVAFMRDCADHRQIFTVRVDW 429

Query: 336 SDQKR 340
            +  R
Sbjct: 430 PEPGR 434


>gi|256374714|ref|YP_003098374.1| hypothetical protein Amir_0561 [Actinosynnema mirum DSM 43827]
 gi|255919017|gb|ACU34528.1| WD-40 repeat protein [Actinosynnema mirum DSM 43827]
          Length = 1344

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 97/289 (33%), Gaps = 19/289 (6%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +       ++++  V+  +    +     ++   GA +          ++   FSP+ +
Sbjct: 647 KLLDRDPSLSAQLALVARGMRPSALDLGTRLISSGGAPLATPLTGHTGAVYLTTFSPDGR 706

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +A A+YD    L             + +      + +  FS +G+    S  KD ++ +
Sbjct: 707 TLATASYDRTVRLWDVTDRDDPKPLGEPLTGHGDWVSSAVFSPDGRTLA-SAGKDGSVRL 765

Query: 285 YSVDLQSNATERLTN--TLFINIS--ASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQK 339
           + V        +L+   +   +     ++SPD   +   +  +   +L+ V   +   Q 
Sbjct: 766 WDV-ADRARPRQLSTAESPGRDTVYLVAFSPDGRTLA-SAHADRAVRLWDVTDPSAPKQV 823

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-----DSNLQA 394
                         +SP G  +  +        +  +  D S  R   E     DS + +
Sbjct: 824 AELAGHGQQVRTVAFSPTG--LLASGSDDATVRLWDV-ADPSAPRQAGEPLGGFDSTVHS 880

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             +SP GR+L    +   D   +L+ +      E      A    P W 
Sbjct: 881 VAFSPDGRTLAAGSE---DRSIRLWDVTDPAAPEARGRPLALHLAPVWS 926



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 102/303 (33%), Gaps = 41/303 (13%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              RLWDV DR +   ++  ++ +  R       D +Y       G         + +   
Sbjct: 762  SVRLWDVADRARP--RQLSTAESPGR-------DTVYLVAFSPDGR--------TLASAH 804

Query: 187  GIIKNSLC-VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  L  V D              Q +    FSP    +A  + D    L      + 
Sbjct: 805  ADRAVRLWDVTDPSAPKQVAELAGHGQQVRTVAFSPTGL-LASGSDDATVRLWDVADPSA 863

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATE--RLTNTLF 302
              +A + +G F S + +  FS +G+    +  +D ++ ++   D  +       L   L 
Sbjct: 864  PRQAGEPLGGFDSTVHSVAFSPDGRTLA-AGSEDRSIRLWDVTDPAAPEARGRPLALHLA 922

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSP 356
               S ++SPD   +      +   +L+    N +D  R+         +  + F   +SP
Sbjct: 923  PVWSVAFSPDGRVLA-SGAADSTARLW----NVTDPARVQPLGKPLAGRSGTVFAVGFSP 977

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             G  +A            V++       +LV   +    P ++P GR+L+   +      
Sbjct: 978  DGRALATGSLDP------VVRMWSLPSTVLVGHAARTVGPRFAPDGRALLTGSEDGTVRA 1031

Query: 416  SKL 418
              L
Sbjct: 1032 WDL 1034



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 83/276 (30%), Gaps = 44/276 (15%)

Query: 90   KITNPDSIPRFQDWNSLGAQVLVTGRVIKEG---KDRLRVEFRLWDVKDRKQIIGKKFFS 146
             +T+P +  +  +    G Q + T      G           RLWDV D           
Sbjct: 813  DVTDPSAPKQVAELAGHGQQ-VRTVAFSPTGLLASGSDDATVRLWDVAD----------- 860

Query: 147  SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-----GIIKNSLCVMDRDGA 201
             P++ R+                 G F+S +  V+ S        G    S+ + D    
Sbjct: 861  -PSAPRQAG------------EPLGGFDSTVHSVAFSPDGRTLAAGSEDRSIRLWDVTDP 907

Query: 202  NIRYLTPSRDQILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
                       +   P +S    P+ + +A    D    L       R+    K +    
Sbjct: 908  AAPEARGRPLALHLAPVWSVAFSPDGRVLASGAADSTARLWNVTDPARVQPLGKPLAGRS 967

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              + A  FS +G+    +   D  + ++S+      +  L       +   ++PD   ++
Sbjct: 968  GTVFAVGFSPDGRALA-TGSLDPVVRMWSLP-----STVLVGHAARTVGPRFAPDGRALL 1021

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                 +G  + + +   G               +PV
Sbjct: 1022 -TGSEDGTVRAWDLAGPGGPDAPTPIGDRRDAGEPV 1056



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 59/306 (19%), Positives = 105/306 (34%), Gaps = 48/306 (15%)

Query: 88   KQKITNPDSIPRFQDWNSLG--AQVLVTGRVIKEGKDRLRVE-----FRLWDVKDRKQ-- 138
                  PD+     D    G   + +V G        R  V       RLWDV+   +  
Sbjct: 1034 LAGPGGPDAPTPIGDRRDAGEPVRAVVLGE-----DGRTMVTAGPKAVRLWDVRPGAEPE 1088

Query: 139  -----IIGKKFFSSPASWRKIAHTISDD-----------------IYQSITGEKGDFNSR 176
                 +  +  FSSP + R      +D+                 + + +TG  G  N  
Sbjct: 1089 PLGEPLPLRTRFSSPLALRGNLLVTADEDDTVLLWDLSDRARPRQLGEPLTGHDGYVNVA 1148

Query: 177  ILFVSES-VVSGIIKNSLCVMD-RDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYD 232
            +L      +V+G   ++L V D  D A  R     P  D  +     SP+ + +A A  D
Sbjct: 1149 LLTPDGRFLVTGSADSALRVWDVSDPARPRAAGRFPGHDGPVRAGALSPDGRVLATAGDD 1208

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                L  +   T        +      ++A  F+ +G+    S  +D  + ++       
Sbjct: 1209 KLVRLWDFSDPTAPRALGAPLAGHEEAVVAVVFTPDGRTLA-SGGEDARLRLWDTSAP-A 1266

Query: 293  ATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                +   +  + SA    S SPD S +   S  +G  +L+ + ++   ++RI       
Sbjct: 1267 LARPIGEGVVGHDSALRDISVSPDGSVVA-TSSADGTVRLWHLDAD-WARRRICARTGGV 1324

Query: 349  YFDPVW 354
              +  W
Sbjct: 1325 LTEDAW 1330


>gi|157376544|ref|YP_001475144.1| peptidase S9 prolyl oligopeptidase [Shewanella sediminis HAW-EB3]
 gi|157318918|gb|ABV38016.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sediminis HAW-EB3]
          Length = 690

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 49/282 (17%), Positives = 92/282 (32%), Gaps = 68/282 (24%)

Query: 217 PRFSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P  S + + +      Y   +D+   +++L   +     + I     ++  P FS + K 
Sbjct: 55  PIVSSSGEYIIAPVTQYDVPEDKGATQLWLFA-KDGSNQRPITAEGLLVSEPVFSPDSKT 113

Query: 272 ALISVQKD--EAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-------- 320
                ++D  EA  +Y + + S    +RLTN         +      + F S        
Sbjct: 114 LAFVSKRDKDEAGQVYLLPMDSPGEAQRLTNVPGGVKGVKWV--GEHVYFISRVFPGKNW 171

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQ----- 343
                                           + + +  ++ + + G + + I+Q     
Sbjct: 172 DEMAEQLRANEDDKVSARQWNALPYSSFDHWIEEDRQAHVFRIPAKGGEVEAITQPMNKQ 231

Query: 344 --DKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLV--EDSNLQA 394
                 S  +   S    LIAF           K  I + K    +   L    ++    
Sbjct: 232 LPRSSQSAANYDISADERLIAFNSNGWENQVDPKVDIFMAKIGSDKVENLTQKNEAPDTN 291

Query: 395 PTWSPSGRSLIFSRK-KDGDTG--SKLYSIDLNGRNETLINT 433
           PT+SP G++L F+R+   G     + L   D+  R E  I T
Sbjct: 292 PTFSPDGKTLAFTRQLIHGFYADTANLVLFDVKKRTEREITT 333



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 51/151 (33%), Gaps = 11/151 (7%)

Query: 266 SSNGKRALISV-----QKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFE 319
           S++ +    +      Q D  +DI+   + S+  E LT      + + ++SPD   + F 
Sbjct: 245 SADERLIAFNSNGWENQVDPKVDIFMAKIGSDKVENLTQKNEAPDTNPTFSPDGKTLAFT 304

Query: 320 SD-----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                        L +       ++ I+ D + S     W+                 I 
Sbjct: 305 RQLIHGFYADTANLVLFDVKKRTEREITTDWDRSVTRFSWTADSKGFYAAIDDAATRRIY 364

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +    S+ + + + +N   P+ +  G  + 
Sbjct: 365 HIDAKSSKIKPITKQTNFGKPSIAQDGTLVA 395



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 61/166 (36%), Gaps = 12/166 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILR----VYLMDTRIDRAPKRIGNFRSMILA 262
            P   Q       S +++ +A+ +   E+ +     +++     D+         +    
Sbjct: 232 LPRSSQSAANYDISADERLIAFNSNGWENQVDPKVDIFMAKIGSDKVENLTQKNEAPDTN 291

Query: 263 PRFSSNGKRALISVQ-----KDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQI 316
           P FS +GK    + Q       +  ++   D++      +T     +    S++ DS   
Sbjct: 292 PTFSPDGKTLAFTRQLIHGFYADTANLVLFDVKKRTEREITTDWDRSVTRFSWTADSKGF 351

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               D     ++Y + +  S  K I+  K+ ++  P  +  G L+A
Sbjct: 352 YAAIDDAATRRIYHIDAKSSKIKPIT--KQTNFGKPSIAQDGTLVA 395



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 75/252 (29%), Gaps = 66/252 (26%)

Query: 260 ILAPRFSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +P  SS+G+  +  V +        A  ++      +    +T    +     +SPDS
Sbjct: 52  IGSPIVSSSGEYIIAPVTQYDVPEDKGATQLWLFAKDGSNQRPITAEGLLVSEPVFSPDS 111

Query: 314 SQIVFESDRE----GKEQLYVMQSNG---------SDQKRISQDKEASYFDPVWSPQGDL 360
             + F S R+    G+  L  M S G            K +    E  YF     P  + 
Sbjct: 112 KTLAFVSKRDKDEAGQVYLLPMDSPGEAQRLTNVPGGVKGVKWVGEHVYFISRVFPGKNW 171

Query: 361 ----------------------IAFTKFS-----GEKFAIGVMKKDGSQERLLVEDSNLQ 393
                                 + ++ F        +  +  +   G +   + +  N Q
Sbjct: 172 DEMAEQLRANEDDKVSARQWNALPYSSFDHWIEEDRQAHVFRIPAKGGEVEAITQPMNKQ 231

Query: 394 APT---------WSPSGRSLIFSRK---KDGDTGSKLYSI--------DLNGRNETLINT 433
            P           S   R + F+        D    ++          +L  +NE     
Sbjct: 232 LPRSSQSAANYDISADERLIAFNSNGWENQVDPKVDIFMAKIGSDKVENLTQKNEAPDTN 291

Query: 434 PAYASDPQWVGF 445
           P ++ D + + F
Sbjct: 292 PTFSPDGKTLAF 303


>gi|326445752|ref|ZP_08220486.1| WD-40 repeat protein [Streptomyces clavuligerus ATCC 27064]
          Length = 1304

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 78/230 (33%), Gaps = 30/230 (13%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P R +      +SP+   +A          RV L D    +        R  + A  +S 
Sbjct: 642 PKRSEAASVLSYSPDGTTLA-----GNIGPRVLLRDALSGKLRATFTGHRKDVTALAYSP 696

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G         D    I   D++S +   L        + +++PD + +   S ++G  +
Sbjct: 697 DGHVLA---TGDTQGVIRLWDIRSGSARTLAGHSNAIHTVTFAPDGTTLA-SSAKDGTVR 752

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQGDLIAFTKFSGEKF 371
           L+   +     + +++  +                       +SP G+ +A         
Sbjct: 753 LW--NTTTGSHRMLTRKAQGIDQTAEPEYDGHRLPLHTSLIGFSPDGETLA-VSQRDGTV 809

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +  +     +  L+     ++   +SP G++L      D DT  +L+ +
Sbjct: 810 GLWAIATRTLRRVLVGHRGQVRRVHFSPDGKTLA--TTDDQDTTIRLWDL 857



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 56/342 (16%), Positives = 110/342 (32%), Gaps = 48/342 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD- 172
            G V+  G  +  +  RLWD++       +       +   +     D    + + + G  
Sbjct: 698  GHVLATGDTQGVI--RLWDIRSGS---ARTLAGHSNAIHTVT-FAPDGTTLASSAKDGTV 751

Query: 173  --FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
              +N+               +     + DG  +   T           FSP+ + +A + 
Sbjct: 752  RLWNTTTGSHRMLTRKAQGIDQTAEPEYDGHRLPLHTS-------LIGFSPDGETLAVSQ 804

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             D      V L         + +   R  +    FS +GK    +  +D  + ++ +  +
Sbjct: 805  RDG----TVGLWAIATRTLRRVLVGHRGQVRRVHFSPDGKTLATTDDQDTTIRLWDL-AK 859

Query: 291  SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                  LT    +  + ++S DSS +V   DR G   +    S+   ++ +         
Sbjct: 860  GAVHTTLTAYFDLISALAFSKDSSVLV-TVDRLG---IRQWASSHPVRRTLRSGHATGIV 915

Query: 351  DPVWSPQGDLIAFTKFSGE----------KFAIGVMKKDGSQERLLVEDSNLQAPT-WSP 399
               ++  G  +A    +            K  + +      + RL + D  + AP   SP
Sbjct: 916  SMDFAQDGRTLATAFGTEGPRDPFLRLLSKHTLHIWNLPSHRRRLTIND--VMAPFDLSP 973

Query: 400  SGRSLIFSRKKDGDTGSKLYSIDL--NGRNETLINTPAYASD 439
             G ++  S            S+DL       T +  PA   D
Sbjct: 974  DGMAIATSSSDG--------SVDLRETRTGRTRLTIPAEVRD 1007



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 76/241 (31%), Gaps = 27/241 (11%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            PS    +    FSP+   +A A  D     R  L++T   +  + I      + +  FS 
Sbjct: 1009 PSDQPFVQALAFSPDGTILAIAGSD-----RTMLLNTHTGKPLRTINTRNVAVSSLAFSP 1063

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G   ++     +  ++   D+ +      L      +     S D           G  
Sbjct: 1064 DGASLVV--MNSDGAEVQLRDVATGKLRGTLGTGQHDSDRLPLSSDGLLAA----GAGSG 1117

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             + +  +    + R     + +     +SP G  +A    +G +  +     +    R  
Sbjct: 1118 SVRLWNTTTFKEHRTITSLDGTVSSVAFSPDGRTLATAGTTGSRIRLW--DTETGTLRQT 1175

Query: 387  VEDSNLQAPTWSPSGRSLIFSRKKD------GDTGSKLYSIDLNGRNETLINTPAYASDP 440
            + DS+ +  +       L FS           D   + ++ DL  +   +        DP
Sbjct: 1176 LSDSSKRFLS-------LAFSSDTPTLAVGISDGTVQFWNTDLPDKRTAVTRLCQAIYDP 1228

Query: 441  Q 441
             
Sbjct: 1229 S 1229



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 57/148 (38%), Gaps = 9/148 (6%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYD----DEDILRVYLMDTRI 246
            SL VM+ DGA ++    +  ++         +  ++  ++            V L +T  
Sbjct: 1067 SLVVMNSDGAEVQLRDVATGKLRGTLGTGQHDSDRLPLSSDGLLAAGAGSGSVRLWNTTT 1126

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINI 305
             +  + I +    + +  FS +G+    +      + ++  D ++    + L+++    +
Sbjct: 1127 FKEHRTITSLDGTVSSVAFSPDGRTLATAGTTGSRIRLW--DTETGTLRQTLSDSSKRFL 1184

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQS 333
            S ++S D+  +      +G  Q +    
Sbjct: 1185 SLAFSSDTPTLA-VGISDGTVQFWNTDL 1211


>gi|255038055|ref|YP_003088676.1| hypothetical protein Dfer_4309 [Dyadobacter fermentans DSM 18053]
 gi|254950811|gb|ACT95511.1| conserved hypothetical protein [Dyadobacter fermentans DSM 18053]
          Length = 460

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 25/165 (15%)

Query: 279 DEAMDIYSVDLQSNATERLTNTL--------FINISASYSPDSSQIVF-ESDREGKEQLY 329
           +     + +  +     RLT T          I  S   SPD SQ+ F   D +G  Q++
Sbjct: 302 EGTATDFPMPPKGTVQRRLTFTAETKYPGCAGIVRS---SPDGSQLAFLAKDAKGVSQIF 358

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER----L 385
            +   G   +++++       +  W P G  +++        +I + +      R    +
Sbjct: 359 TISPLGGKPRQVTECTSDVTGNLRWHPDGKHVSYVYEG----SIVLCEVGDGPFRERIQV 414

Query: 386 LVEDSNL--QAPTWSPSGRSLIFSR---KKDGDTGSKLYSIDLNG 425
           L E S        WSP G+ L F+R      G    +++ + L G
Sbjct: 415 LTEPSEFATSNLVWSPDGKVLAFNRLVKNDTGKAMQQVFILKLEG 459



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 45/117 (38%), Gaps = 8/117 (6%)

Query: 254 GNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSP 311
             +       R S +G +    +        I+++        ++T  T  +  +  + P
Sbjct: 326 TKYPGCAGIVRSSPDGSQLAFLAKDAKGVSQIFTISPLGGKPRQVTECTSDVTGNLRWHP 385

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAFTK 365
           D   + +  +      +     +G  ++RI   ++  E +  + VWSP G ++AF +
Sbjct: 386 DGKHVSYVYE---GSIVLCEVGDGPFRERIQVLTEPSEFATSNLVWSPDGKVLAFNR 439



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 54/126 (42%), Gaps = 12/126 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQK 278
           SP+  ++A+   D + + +++ +   +   P+++    S +    R+  +GK      + 
Sbjct: 338 SPDGSQLAFLAKDAKGVSQIFTISP-LGGKPRQVTECTSDVTGNLRWHPDGKHVSYVYE- 395

Query: 279 DEAMDIYSV-DLQSNATER-LTNTLFINISA-SYSPDSSQIVFES---DREGK--EQLYV 330
             ++ +  V D       + LT       S   +SPD   + F     +  GK  +Q+++
Sbjct: 396 -GSIVLCEVGDGPFRERIQVLTEPSEFATSNLVWSPDGKVLAFNRLVKNDTGKAMQQVFI 454

Query: 331 MQSNGS 336
           ++  G+
Sbjct: 455 LKLEGN 460



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 13/95 (13%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                + +  +   G   R +T     +    R+ P+ + V+Y          + L +  
Sbjct: 350 DAKGVSQIFTISPLGGKPRQVTECTSDVTGNLRWHPDGKHVSYVYEG-----SIVLCEVG 404

Query: 246 IDRAPKRI------GNFRSMILAPRFSSNGKRALI 274
                +RI        F +  L   +S +GK    
Sbjct: 405 DGPFRERIQVLTEPSEFATSNL--VWSPDGKVLAF 437


>gi|315500074|ref|YP_004088877.1| hypothetical protein Astex_3090 [Asticcacaulis excentricus CB 48]
 gi|315418086|gb|ADU14726.1| hypothetical protein Astex_3090 [Asticcacaulis excentricus CB 48]
          Length = 641

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 76/232 (32%), Gaps = 19/232 (8%)

Query: 219 FSP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           + P ++  +    + +       L   R+    +   +F +  ++   S  G   L+S  
Sbjct: 61  WDPTDRSMLISTRFGN----TAQLHSVRMPMGARTQISFEAEPVSGTLSPKGDVLLVSKD 116

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQS-N 334
                      L+      LT+    N    +S D   I + S R       LYVM   +
Sbjct: 117 TGGNEFFQLYTLKDGRLTLLTDGKSRNNFQGFSRDGELIAYSSTRRNGTDTDLYVMNPRD 176

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVE---DS 390
               + ++Q     +    ++P        K+    K  + ++     Q   + +   D 
Sbjct: 177 PKTDRMVAQVSGGGWGFADFAPDKKTAVVAKYISVTKSNLYLLDLQSGQMTPIGDHKTDI 236

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                 ++P G   ++     G    +L ++D+     T       + DP+W
Sbjct: 237 AWGGVQFAPDGT--LWVTSDIGSDFQRLGTLDIKTGKFTP-----KSPDPKW 281



 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 52/329 (15%), Positives = 109/329 (33%), Gaps = 21/329 (6%)

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWR--KIAHTISDDIYQSITGEKGDFNSRILFVSE 182
              FR WD  DR  +I  +F  + A     ++       I        G  + +   +  
Sbjct: 55  TASFRGWDPTDRSMLISTRF-GNTAQLHSVRMPMGARTQISFEAEPVSGTLSPKGDVLLV 113

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYL 241
           S  +G  +       +DG  +  LT  + +  F+  FS + + +AY++         +Y+
Sbjct: 114 SKDTGGNEFFQLYTLKDG-RLTLLTDGKSRNNFQ-GFSRDGELIAYSSTRRNGTDTDLYV 171

Query: 242 MDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTN 299
           M+ R  +  + +            F+ + K A+++        ++Y +DLQS     + +
Sbjct: 172 MNPRDPKTDRMVAQVSGGGWGFADFAPDKKTAVVAKYISVTKSNLYLLDLQSGQMTPIGD 231

Query: 300 TL-FINISAS-YSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
               I      ++PD +  V  SD     ++L  +          S D +        + 
Sbjct: 232 HKTDIAWGGVQFAPDGTLWV-TSDIGSDFQRLGTLDIKTGKFTPKSPDPKWDVESFDIAD 290

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKK 410
            G  IA++      + + ++         +             AP W      +  +  K
Sbjct: 291 DGSFIAYSVNEAGVYRLKLLDPKTGTSTPVTSLPKGTVGGFDIAP-W--DEIGVTVASAK 347

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASD 439
                  +Y   +  +  T   T     +
Sbjct: 348 AASDAYSIYPKTMTVKRWTQSETGGLDPN 376


>gi|158336397|ref|YP_001517571.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158306638|gb|ABW28255.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1188

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 76/220 (34%), Gaps = 14/220 (6%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               N L + D D   +    P    +     FSP+   +A  +    D+  + L D    
Sbjct: 920  AQDNKLKIWDLDNDRLHSNLPVSFDVTRAITFSPDGNLLACTS----DLGDLQLWDVNAG 975

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
               +R+    + I +  FS +G     S   D+ + ++ V  ++ +   +          
Sbjct: 976  LCTQRLQGHSNAIWSVAFSPDGCLLA-SGGMDQTLRLWQV--ENGSCCEVFEYSGWVGEL 1032

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            ++SP    +   S   G+  + +   +    +              +S  G L+A   F 
Sbjct: 1033 AFSPQGDLLA--SFSAGEPVVILQPLSDLQCRHKLTGHLNLISAIDFSKDGTLLASCSFD 1090

Query: 368  GEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
                 I +     SQ   +     S++ +  +SP G+ ++
Sbjct: 1091 QT---IRIWDIQTSQCLQICRGHTSSVWSVVFSPCGQMVV 1127



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 87/246 (35%), Gaps = 18/246 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + SG    ++ + D                +    FS + Q +A  + D+     + 
Sbjct: 744 SPYLASGSNDKTMRLWDLQSGQCLMCLSGHSNAIVSVDFSADGQTLASGSQDN----TIR 799

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L DT          +  S + +  F+ +      S  +D ++ ++  ++      R T +
Sbjct: 800 LWDTSSGHCVACFTDHTSWVWSVSFAHSSNLLA-SGSQDRSVRLW--NIAKGKCFR-TFS 855

Query: 301 LFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            F N   S  ++P+ ++++  S       +    +   D  + +  +E        SP G
Sbjct: 856 GFTNTVWSLVFTPEGNRLISGSQDGW---IRFWDTQRGDCLQ-AHQQEGFVSTVAISPDG 911

Query: 359 DLIAFTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            L+A   +    K  I  +  D     L V     +A T+SP G  L  +         +
Sbjct: 912 HLLASGGYAQDNKLKIWDLDNDRLHSNLPVSFDVTRAITFSPDGNLLACTSDLG---DLQ 968

Query: 418 LYSIDL 423
           L+ ++ 
Sbjct: 969 LWDVNA 974



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 61/187 (32%), Gaps = 15/187 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TER 296
            +YL      +    +    + I +  FS NG R   S   D  + I+  D+ +      
Sbjct: 587 NIYLWQISNGQQLLALKGHTAWISSIAFSPNGDRLA-SGSFDHTLRIW--DIDTGQCLNT 643

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L        S ++S +   +   S     + + +          + Q  +A      +SP
Sbjct: 644 LAGHQDAIWSVAFSREGDVLASCSS---DQTIRLWNLAEGRCLNVLQGHDAPVHSVAFSP 700

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDT 414
           Q   +A +        + +   +  +     +  N  + +  +SP+   L        D 
Sbjct: 701 QNSYLASSSADST---VKLWDLETGECINTFQGHNETVWSVAFSPTSPYLA---SGSNDK 754

Query: 415 GSKLYSI 421
             +L+ +
Sbjct: 755 TMRLWDL 761



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 74/218 (33%), Gaps = 17/218 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSPN  ++A  ++D      + + D    +    +   +  I +  FS
Sbjct: 602 LKGHTAWISSIAFSPNGDRLASGSFDH----TLRIWDIDTGQCLNTLAGHQDAIWSVAFS 657

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             G     S   D+ + ++++  +      L        S ++SP +S +   S  +   
Sbjct: 658 REGDVLA-SCSSDQTIRLWNL-AEGRCLNVLQGHDAPVHSVAFSPQNSYLA-SSSADSTV 714

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERL 385
           +L+       +     Q    + +   +SP    +A +  + +   +        Q    
Sbjct: 715 KLW--DLETGECINTFQGHNETVWSVAFSPTSPYLA-SGSNDKTMRLW--DLQSGQCLMC 769

Query: 386 LVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           L   SN   +  +S  G++L    +   D   +L+   
Sbjct: 770 LSGHSNAIVSVDFSADGQTLASGSQ---DNTIRLWDTS 804


>gi|302532655|ref|ZP_07284997.1| predicted protein [Streptomyces sp. C]
 gi|302441550|gb|EFL13366.1| predicted protein [Streptomyces sp. C]
          Length = 731

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 76/228 (33%), Gaps = 23/228 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISV 276
            FSP+ + +A         LR++ + +R       I      ++    FS +G     + 
Sbjct: 453 AFSPDGKLLA-----TGGRLRLWDVASRA-----IIATLSGHVVNQAVFSPDGAILATAG 502

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           Q D    ++ V  +S+    LT        A++SPD   +   +  +   +L+ + +   
Sbjct: 503 Q-DGTARLWDVAARSHRAT-LTGHDHAVEGAAFSPDGRVLA-TAGSDATVRLWDVAARAG 559

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                 +          +SP G  +A     G    +  MK   +   L +E  +     
Sbjct: 560 TATL--KGHTHYVRSVAFSPDGRTLATASVDGTT-RLWDMKTRTTTAVLAMEGQHFNGAV 616

Query: 397 WSPSGRSLIFSRKK------DGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +SP G  L     K      D    + +  +D +      +      S
Sbjct: 617 FSPDGSMLAAVLSKGRIRLWDAGGRAVIADLDADASGIQALAFNRDGS 664



 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 94/306 (30%), Gaps = 49/306 (16%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             RLWDV  R  I                H ++  +          F+     ++ +   
Sbjct: 466 RLRLWDVASRAIIATLS-----------GHVVNQAV----------FSPDGAILATAGQD 504

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G  +    + D    + R      D  +    FSP+ + +A           V L D   
Sbjct: 505 GTAR----LWDVAARSHRATLTGHDHAVEGAAFSPDGRVLA----TAGSDATVRLWDVAA 556

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                 +      + +  FS +G+    +   D    ++ +  ++            N  
Sbjct: 557 RAGTATLKGHTHYVRSVAFSPDGRTLA-TASVDGTTRLWDMKTRTTTAVLAMEGQHFN-G 614

Query: 307 ASYSPDSSQIVFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ- 357
           A +SPD S +            D  G+  +  + ++ S  + ++ +++ S          
Sbjct: 615 AVFSPDGSMLAAVLSKGRIRLWDAGGRAVIADLDADASGIQALAFNRDGSVLACATKGGS 674

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G           + +  V+  D          + + +  +SP G +L        D   +
Sbjct: 675 GTASVGVWNVRRRESAAVLSVDTDDV------AGVSSVAFSPDGETLA---AAGNDGTVQ 725

Query: 418 LYSIDL 423
           L++ D+
Sbjct: 726 LWNTDV 731



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 84/251 (33%), Gaps = 14/251 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            + G     +  V+ S    ++     +   D A+   +      ++ +  FSP+   +A
Sbjct: 440 RKDGFGAGELYTVAFSPDGKLLATGGRLRLWDVASRAIIATLSGHVVNQAVFSPDGAILA 499

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            A  D        L D         +      +    FS +G+    +   D  + ++ V
Sbjct: 500 TAGQDG----TARLWDVAARSHRATLTGHDHAVEGAAFSPDGRVLATAGS-DATVRLWDV 554

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             ++     L        S ++SPD   +   +  +G  +L+           +   +  
Sbjct: 555 AARAGTAT-LKGHTHYVRSVAFSPDGRTLA-TASVDGTTRLW--DMKTRTTTAVLAMEGQ 610

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLI 405
            +   V+SP G ++A     G    I +    G      L  + S +QA  ++  G  L 
Sbjct: 611 HFNGAVFSPDGSMLAAVLSKG---RIRLWDAGGRAVIADLDADASGIQALAFNRDGSVLA 667

Query: 406 FSRKKDGDTGS 416
            + K    T S
Sbjct: 668 CATKGGSGTAS 678



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 71/191 (37%), Gaps = 20/191 (10%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++ G     +    FS +GK           + ++  D+ S A    T +  +   A +S
Sbjct: 440 RKDGFGAGELYTVAFSPDGKLLA----TGGRLRLW--DVASRAIIA-TLSGHVVNQAVFS 492

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD + +   + ++G  +L+         +      + +     +SP G ++A T  S   
Sbjct: 493 PDGAILA-TAGQDGTARLW--DVAARSHRATLTGHDHAVEGAAFSPDGRVLA-TAGSDAT 548

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             +  +        L      +++  +SP GR+L  +     D  ++L+ +      +T 
Sbjct: 549 VRLWDVAARAGTATLKGHTHYVRSVAFSPDGRTLATASV---DGTTRLWDM------KTR 599

Query: 431 INTPAYASDPQ 441
             T   A + Q
Sbjct: 600 TTTAVLAMEGQ 610


>gi|302535039|ref|ZP_07287381.1| predicted protein [Streptomyces sp. C]
 gi|302443934|gb|EFL15750.1| predicted protein [Streptomyces sp. C]
          Length = 650

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 84/238 (35%), Gaps = 16/238 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    S+ + +  G     L+P  +  +    +SP+ + +   +     +  VY ++ 
Sbjct: 385 VSGGNDRSIQLYNFAGGGTITLSPMPEAAVTCVSYSPDGKVLVGGSDKVLRLHDVYSLEL 444

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATERLTNTLFI 303
                   +     ++ A  FS + K    S   D  + ++  V   + A   LT     
Sbjct: 445 LG-----ILAEHTGLVRAVAFSPDSKTLA-SGADDGTIRLWDVVTRSTVAVATLTGHTKP 498

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +S +++PD +        +G  +L+                  +     +SP G ++A 
Sbjct: 499 VLSLAFAPDGTLA--SGCADGTIRLW--DLASRTSTATLTGHTKAVAAVAFSPDGKVLA- 553

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +  +     +           L   +S +++  +S  G+++       G    +L+ +
Sbjct: 554 SGSADSSVRLWDPAARTGTSTLPGHNSPVRSVAFSADGQTIA----SGGGRTIRLWDV 607



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 76/208 (36%), Gaps = 14/208 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +      ++    FSP+ + +A  +  D+  +R++ + TR   A   +      +L+  F
Sbjct: 447 ILAEHTGLVRAVAFSPDSKTLA--SGADDGTIRLWDVVTRSTVAVATLTGHTKPVLSLAF 504

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           + +G   L S   D  + ++ +  +++    LT       + ++SPD   +   S     
Sbjct: 505 APDGT--LASGCADGTIRLWDLASRTSTAT-LTGHTKAVAAVAFSPDGKVLASGS---AD 558

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +                +      +S  G  IA    SG    I +      + R 
Sbjct: 559 SSVRLWDPAARTGTSTLPGHNSPVRSVAFSADGQTIA----SGGGRTIRLWDVPSREHRA 614

Query: 386 LV--EDSNLQAPTWSPSGRSLIFSRKKD 411
            +    + + +  +S  G++L  + + D
Sbjct: 615 TLNGHTAAVTSVAFSADGKTLASASEDD 642



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 53/189 (28%), Gaps = 26/189 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI---TGEKGDF 173
                       RLWDV  R  +              +A      +       T    D 
Sbjct: 465 KTLASGADDGTIRLWDVVTRSTVAVATLTGHTKPVLSLAFAPDGTLASGCADGTIRLWDL 524

Query: 174 NSRILFVSESV-----------------VSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            SR    + +                   SG   +S+ + D          P  +  +  
Sbjct: 525 ASRTSTATLTGHTKAVAAVAFSPDGKVLASGSADSSVRLWDPAARTGTSTLPGHNSPVRS 584

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             FS + Q +A           + L D         +    + + +  FS++GK    S 
Sbjct: 585 VAFSADGQTIA-----SGGGRTIRLWDVPSREHRATLNGHTAAVTSVAFSADGKTLA-SA 638

Query: 277 QKDEAMDIY 285
            +D+++ ++
Sbjct: 639 SEDDSIRVW 647



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 54/154 (35%), Gaps = 24/154 (15%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                 S + SPDS  +V      G ++ + +    G     +S   EA+     +SP G
Sbjct: 368 HAGSVDSVAISPDSRFLV----SGGNDRSIQLYNFAGGGTITLSPMPEAAVTCVSYSPDG 423

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            ++      G    + +      +    L      ++A  +SP  ++L        D   
Sbjct: 424 KVLV----GGSDKVLRLHDVYSLELLGILAEHTGLVRAVAFSPDSKTLA---SGADDGTI 476

Query: 417 KLYSI---------DLNGRNETLINTPAYASDPQ 441
           +L+ +          L G  + +++  A+A D  
Sbjct: 477 RLWDVVTRSTVAVATLTGHTKPVLSL-AFAPDGT 509


>gi|50954559|ref|YP_061847.1| acylaminoacyl-peptidase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50951041|gb|AAT88742.1| acylaminoacyl-peptidase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 675

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 72/222 (32%), Gaps = 22/222 (9%)

Query: 214 LFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           +  P   P  ++   +          ++ +++ +      AP+R+       + PRFS  
Sbjct: 12  VSAPAVHPGGERAVVSVTHPSLEADAEVGQLWTIPLAGHAAPRRLTRGFRDSV-PRFSPA 70

Query: 269 GKRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           G+          A   ++ VD        +T+         ++PD   + F S +  + +
Sbjct: 71  GRLLAFLRAGPNAPPQLHVVDAAGGEPVAVTDRRLGVSEFVWAPDGRTLAFVSRQPEQGR 130

Query: 328 LYVMQ---SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK---KDGS 381
              ++    +    +RI      +      + +   +   +        GV      DGS
Sbjct: 131 YGTVEGIGPDAEPARRIVTQNYQANGLGYTNDRRAHVFVAEVPDVWAEPGVQPAPEPDGS 190

Query: 382 --------QERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDT 414
                   +   L + D +     +SP G +L F   + G  
Sbjct: 191 AGPPLAVPEAWQLTDGDGDDTTIAFSPDGATLAFVSARHGTA 232



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 62/148 (41%), Gaps = 14/148 (9%)

Query: 258 SMILAPRFSSNGKRALISVQKD------EAMDIYSVDLQS-NATERLTNTLFINISASYS 310
           + + AP     G+RA++SV         E   ++++ L    A  RLT   F +    +S
Sbjct: 10  TSVSAPAVHPGGERAVVSVTHPSLEADAEVGQLWTIPLAGHAAPRRLTRG-FRDSVPRFS 68

Query: 311 PDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           P    + F  +      QL+V+ + G +   ++ D+     + VW+P G  +AF     E
Sbjct: 69  PAGRLLAFLRAGPNAPPQLHVVDAAGGEPVAVT-DRRLGVSEFVWAPDGRTLAFVSRQPE 127

Query: 370 KFAIGVMKKDGSQ----ERLLVEDSNLQ 393
           +   G ++  G       R++ ++    
Sbjct: 128 QGRYGTVEGIGPDAEPARRIVTQNYQAN 155



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 60/187 (32%), Gaps = 14/187 (7%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
             H     + +        F+     ++           L V+D  G     +T  R  +
Sbjct: 48  AGHAAPRRLTRGFRDSVPRFSPAGRLLAFLRAGPNAPPQLHVVDAAGGEPVAVTDRRLGV 107

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRA 272
                ++P+ + +A+ +   E      +     D  P +RI           ++++ +  
Sbjct: 108 SEF-VWAPDGRTLAFVSRQPEQGRYGTVEGIGPDAEPARRIVTQNYQANGLGYTNDRRAH 166

Query: 273 LISVQKDEAMDIYSV------------DLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +   +  +      V             L      +LT+    + + ++SPD + + F S
Sbjct: 167 VFVAEVPDVWAEPGVQPAPEPDGSAGPPLAVPEAWQLTDGDGDDTTIAFSPDGATLAFVS 226

Query: 321 DREGKEQ 327
            R G  +
Sbjct: 227 ARHGTAR 233



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 9/106 (8%)

Query: 347 ASYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSP 399
            S   P   P G+    +      +   E   +  +   G +  R L        P +SP
Sbjct: 10  TSVSAPAVHPGGERAVVSVTHPSLEADAEVGQLWTIPLAGHAAPRRLTRGFRDSVPRFSP 69

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVG 444
           +GR L F R    +   +L+ +D  G     +       S+  W  
Sbjct: 70  AGRLLAFLR-AGPNAPPQLHVVDAAGGEPVAVTDRRLGVSEFVWAP 114


>gi|296122784|ref|YP_003630562.1| dipeptidyl-peptidase IV [Planctomyces limnophilus DSM 3776]
 gi|296015124|gb|ADG68363.1| Dipeptidyl-peptidase IV [Planctomyces limnophilus DSM 3776]
          Length = 1006

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/325 (11%), Positives = 99/325 (30%), Gaps = 36/325 (11%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++ L+D+  ++++      + PA     A    D    +       +   +   + + ++
Sbjct: 140 DYWLFDL-KQQKLTKLGGTTPPAQM-MFAKISPDQTKVAFVYAHNLYVQSLTDWTVTPLT 197

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                +L     D  N   L           R+SP+ Q +A+  +D   + R  ++D   
Sbjct: 198 TDGSETLINGTSDWVNEEELAIRDGW-----RWSPDSQSIAFYQFDTTGVPRFTMIDHGQ 252

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
              PK I      +                +K+ +  +  V++       +         
Sbjct: 253 QNYPKVITFPYPKVG---------------EKNSSTRVGVVNISGGKPTWI-ELPGDPRE 296

Query: 307 A-----SYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASY----FDPVWS 355
                  ++P   Q++ +  +  + +  ++++       + +  + E ++        W 
Sbjct: 297 HYIPQVEWTPAGGQLLIQQMNRPQNRNIVFLVDVTSGKLRTVMTEVEETWIENDNPVKWL 356

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGD 413
             G    +         +     +  + +++   S       +       L F+   +  
Sbjct: 357 AGGKEFLWISERSGWRHVYRANLESGELQVITRGSFDVIDVEAIDETKGILYFAASPENP 416

Query: 414 TGSKLYSIDLNGRNETLINTPAYAS 438
           T   LY + L G     +     + 
Sbjct: 417 TQRYLYQVPLRGGEIQRVTPAGQSG 441



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 78/231 (33%), Gaps = 23/231 (9%)

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFN----------SRILFVSESVVSGIIKNSLCVMD 197
              WR    + S   YQ  T     F             I F    V        + V++
Sbjct: 220 RDGWRWSPDSQSIAFYQFDTTGVPRFTMIDHGQQNYPKVITFPYPKVGEKNSSTRVGVVN 279

Query: 198 RDGANIRYL-TPSRDQILFEPR--FSPNQQKVAYATYDDEDILRV-YLMDTRIDRAPKRI 253
             G    ++  P   +  + P+  ++P   ++     +      + +L+D    +    +
Sbjct: 280 ISGGKPTWIELPGDPREHYIPQVEWTPAGGQLLIQQMNRPQNRNIVFLVDVTSGKLRTVM 339

Query: 254 GNFRSMILA----PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--INISA 307
                  +      ++ + GK  L   ++     +Y  +L+S   + +T   F  I++ A
Sbjct: 340 TEVEETWIENDNPVKWLAGGKEFLWISERSGWRHVYRANLESGELQVITRGSFDVIDVEA 399

Query: 308 SYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                   + F +  E   Q  LY +   G + +R++   ++ +     +P
Sbjct: 400 -IDETKGILYFAASPENPTQRYLYQVPLRGGEIQRVTPAGQSGWHTYQIAP 449


>gi|242821359|ref|XP_002487664.1| wd40 repeat pf20, putative [Talaromyces stipitatus ATCC 10500]
 gi|218712585|gb|EED12010.1| wd40 repeat pf20, putative [Talaromyces stipitatus ATCC 10500]
          Length = 255

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 55/164 (33%), Gaps = 15/164 (9%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQ 315
           +    A  FS +GK    S   D  + ++  DL +    + L       ++ ++SPD   
Sbjct: 38  KGSFFAVAFSPDGKLVA-SGSVDYTIKLW--DLATGTLRQTLEGHSGPVLAVAFSPDGKL 94

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
               S     + + +        ++  +          +SP   L+A   +      + +
Sbjct: 95  TASGSY---DKTVKLWDPATGTLRQTLEGHSDLIQTVAFSPNSKLVASGSYDK---MVKL 148

Query: 376 MKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                   R  +ED    ++   +SP G+   F     G   ++
Sbjct: 149 WDLATGTLRQTLEDHSGLVRVVAFSPDGK---FLETNQGRLNTE 189



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 54/145 (37%), Gaps = 11/145 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + VA  + D      + L D       + +      +LA  FS +GK    S  
Sbjct: 45  AFSPDGKLVASGSVD----YTIKLWDLATGTLRQTLEGHSGPVLAVAFSPDGK-LTASGS 99

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D+ + ++  D  +    + L     +  + ++SP+S  +   S     + + +      
Sbjct: 100 YDKTVKLW--DPATGTLRQTLEGHSDLIQTVAFSPNSKLVASGSY---DKMVKLWDLATG 154

Query: 337 DQKRISQDKEASYFDPVWSPQGDLI 361
             ++  +D         +SP G  +
Sbjct: 155 TLRQTLEDHSGLVRVVAFSPDGKFL 179



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 9/151 (5%)

Query: 166 ITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           I   KG F +         V SG +  ++ + D     +R         +    FSP+ +
Sbjct: 34  IFAPKGSFFAVAFSPDGKLVASGSVDYTIKLWDLATGTLRQTLEGHSGPVLAVAFSPDGK 93

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
             A  +YD      V L D       + +     +I    FS N  + + S   D+ + +
Sbjct: 94  LTASGSYDK----TVKLWDPATGTLRQTLEGHSDLIQTVAFSPN-SKLVASGSYDKMVKL 148

Query: 285 YSVDLQSNATER-LTNTLFINISASYSPDSS 314
           +  DL +    + L +   +    ++SPD  
Sbjct: 149 W--DLATGTLRQTLEDHSGLVRVVAFSPDGK 177



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 41/133 (30%), Gaps = 11/133 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD   +   S       + +        ++  +          +SP G L A   + 
Sbjct: 45  AFSPDGKLVASGSV---DYTIKLWDLATGTLRQTLEGHSGPVLAVAFSPDGKLTASGSYD 101

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                + +        R  +E  +   Q   +SP+ + +        D   KL+ +    
Sbjct: 102 KT---VKLWDPATGTLRQTLEGHSDLIQTVAFSPNSKLVASGSY---DKMVKLWDLATGT 155

Query: 426 RNETLINTPAYAS 438
             +TL +      
Sbjct: 156 LRQTLEDHSGLVR 168



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 5/64 (7%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWS 398
           +    + S+F   +SP G L+A        + I +        R  +E     + A  +S
Sbjct: 33  LIFAPKGSFFAVAFSPDGKLVASGSVD---YTIKLWDLATGTLRQTLEGHSGPVLAVAFS 89

Query: 399 PSGR 402
           P G+
Sbjct: 90  PDGK 93


>gi|119776146|ref|YP_928886.1| dipeptidyl peptidase IV [Shewanella amazonensis SB2B]
 gi|119768646|gb|ABM01217.1| dipeptidyl peptidase IV, putative [Shewanella amazonensis SB2B]
          Length = 824

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 82/225 (36%), Gaps = 13/225 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE- 280
           ++  +A    D+           +  R  + + ++     A ++S +GK  ++    D  
Sbjct: 337 DEDVLAAVKADNAKARGESYQSEKAPRKVQLMQDWGWSQSAIQWSDDGKLLVMLEAVDNK 396

Query: 281 AMDIYSVDLQSNATE---RLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSN 334
              I SV+L S       RL +  ++N   +   +  D     F S+  G  QLY+ ++ 
Sbjct: 397 DRWIASVNLDSGKLTTEHRLHDDAWVNYDYNQFGWLEDGRFF-FLSEETGYSQLYI-KAP 454

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           G     ++  +     D   SP G  + +   K     + +  +     ++  L      
Sbjct: 455 GKAATALTSGQFV-VSDVTLSPDGKHLYYKANKDHPGVYNVYRVALADGKDEQLTHWEGT 513

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              + SP G+ L+ +         +LY  ++ G  + L +  +  
Sbjct: 514 LDYSLSPDGKRLLLTASSR-IQPEELYVQEIGGELKRLTHYTSEV 557



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 55/140 (39%), Gaps = 11/140 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +  + +      +  E+     L      +A   + + + ++     S +GK       K
Sbjct: 431 WLEDGRFF----FLSEETGYSQLYIKAPGKAATALTSGQFVVSDVTLSPDGKHLYYKANK 486

Query: 279 D--EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFE-SDREGKEQLYVMQSN 334
           D     ++Y V L     E+LT+    ++ S   SPD  +++   S R   E+LYV +  
Sbjct: 487 DHPGVYNVYRVALADGKDEQLTHWEGTLDYS--LSPDGKRLLLTASSRIQPEELYVQEI- 543

Query: 335 GSDQKRISQDKEASYFDPVW 354
           G + KR++      +    W
Sbjct: 544 GGELKRLTHYTSEVFAKYTW 563



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 52/150 (34%), Gaps = 11/150 (7%)

Query: 156 HTISDD--IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           H + DD  +           + R  F+SE        + L +             S   +
Sbjct: 414 HRLHDDAWVNYDYNQFGWLEDGRFFFLSEETG----YSQLYIKAP--GKAATALTSGQFV 467

Query: 214 LFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           + +   SP+ + + Y A  D   +  VY +     +  +++ ++    L    S +GKR 
Sbjct: 468 VSDVTLSPDGKHLYYKANKDHPGVYNVYRVALADGKD-EQLTHWEG-TLDYSLSPDGKRL 525

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           L++       +   V       +RLT+   
Sbjct: 526 LLTASSRIQPEELYVQEIGGELKRLTHYTS 555


>gi|119489256|ref|ZP_01622063.1| hypothetical protein L8106_07371 [Lyngbya sp. PCC 8106]
 gi|119454730|gb|EAW35875.1| hypothetical protein L8106_07371 [Lyngbya sp. PCC 8106]
          Length = 180

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 3/124 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFE 319
           P  S NG+       ++    I   DLQ      L    N   I  + S S  +  +V+ 
Sbjct: 40  PTLSGNGQFLAYVSNRNGQRQIVLYDLQRQTLIDLPGLNNGSAIAENPSLSSTARYLVYL 99

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +   G+ ++ +     +  + +SQ        P  SP G  I F      ++ + V+ + 
Sbjct: 100 ASDSGRPEIELYDRKTNHVQIVSQGYRGWIRHPRISPDGRYIVFESGRRGQWDLEVLDRG 159

Query: 380 GSQE 383
              E
Sbjct: 160 SKVE 163



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 17/124 (13%), Positives = 47/124 (37%), Gaps = 4/124 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           N+   +   + S +   + + S+R G+ Q+ +          +    +  A   +P  S 
Sbjct: 32  NSSASDEQPTLSGNGQFLAYVSNRNGQRQIVLYDLQRQTLIDLPGLNNGSAIAENPSLSS 91

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
               + +      +  I +  +  +  +++ +     ++ P  SP GR ++F   + G  
Sbjct: 92  TARYLVYLASDSGRPEIELYDRKTNHVQIVSQGYRGWIRHPRISPDGRYIVFESGRRGQW 151

Query: 415 GSKL 418
             ++
Sbjct: 152 DLEV 155



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 4/130 (3%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFS 266
           +      +P  S N Q +AY +  +    ++ L D +        G      +A  P  S
Sbjct: 32  NSSASDEQPTLSGNGQFLAYVSNRNGQ-RQIVLYDLQRQTLIDLPGLNNGSAIAENPSLS 90

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGK 325
           S  +  +         +I   D ++N  + ++            SPD   IVFES R G+
Sbjct: 91  STARYLVYLASDSGRPEIELYDRKTNHVQIVSQGYRGWIRHPRISPDGRYIVFESGRRGQ 150

Query: 326 EQLYVMQSNG 335
             L V+    
Sbjct: 151 WDLEVLDRGS 160



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 33/111 (29%), Gaps = 5/111 (4%)

Query: 188 IIKNSLCVMDRDGANIRYL----TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                  ++  D      +      +   I   P  S   + + Y   D      + L D
Sbjct: 54  NRNGQRQIVLYDLQRQTLIDLPGLNNGSAIAENPSLSSTARYLVYLASDSGRP-EIELYD 112

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            + +        +R  I  PR S +G+  +    +    D+  +D  S   
Sbjct: 113 RKTNHVQIVSQGYRGWIRHPRISPDGRYIVFESGRRGQWDLEVLDRGSKVE 163



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 8/111 (7%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN----L 392
           +   I+ +  AS   P  S  G  +A+      +  I +          L   +N     
Sbjct: 25  EVGAIALNSSASDEQPTLSGNGQFLAYVSNRNGQRQIVLYDLQRQTLIDLPGLNNGSAIA 84

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYASDPQ 441
           + P+ S + R L++     G    +LY  D    +  +++     +   P+
Sbjct: 85  ENPSLSSTARYLVYLASDSGRPEIELY--DRKTNHVQIVSQGYRGWIRHPR 133


>gi|300727272|ref|ZP_07060688.1| prolyl oligopeptidase family protein [Prevotella bryantii B14]
 gi|299775510|gb|EFI72104.1| prolyl oligopeptidase family protein [Prevotella bryantii B14]
          Length = 695

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 56/366 (15%), Positives = 111/366 (30%), Gaps = 101/366 (27%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            G V      +    +V +         QI+   + S      KI           +T +
Sbjct: 25  IGGVTTSPDGKKIAYQVGYYSVKENKGHQIL---YVSDSNGKNKI----------QLTQD 71

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK---- 225
               +      +   ++ +    +  MD DG N + L+ S+  I    RFSP+ +K    
Sbjct: 72  AKSESDVAWIENGKSLAFLRDGQIWKMDVDGKNRKQLSNSKIAIEGF-RFSPDGKKVLLI 130

Query: 226 --VAYATYDDEDI---------------LRVYLMDTRIDRAP---------------KRI 253
             + Y     ++                 R +         P                  
Sbjct: 131 MSIPYYGSIKKNPSDLPLASGRVVTDLNYRHWDHYVETIAHPFVAELKNDKITEGIDILK 190

Query: 254 GNFRSMILAP-------RFSSNGKRALISVQKDEA--------MDIYSVDLQSNATERL- 297
           G      LAP        +S + K    + +K E          DIY  +++S  T  L 
Sbjct: 191 GEPYESPLAPFGGIEQFAWSPDSKNVAYTCRKKEGVDYAISTDADIYLYNIESGKTINLC 250

Query: 298 ------------TNTL--------------FINISASYSPDSSQIVFES-DREG----KE 326
                       T +L                +I+  +SPD + I ++S +R+G    + 
Sbjct: 251 KPADYKAPKVDPTKSLKDQAVNHQNGDFNVGYDINPKFSPDGNYIAWQSMERDGYESDRN 310

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +L +       +K +++  +++  D  W+     + F         +     +G + + L
Sbjct: 311 RLCIYNIKKGTKKYVTETFDSNVDDYCWANNSKTLYFIGVWEATTMVYQTNLNG-EIKQL 369

Query: 387 VEDSNL 392
            +    
Sbjct: 370 TDGWYD 375



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 75/242 (30%), Gaps = 63/242 (26%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I     S +GK+    V      +      +Y  D       +LT         ++  
Sbjct: 23  GRIGGVTTSPDGKKIAYQVGYYSVKENKGHQILYVSDSNGKNKIQLTQDAKSESDVAWIE 82

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +   + F   R+G  Q++ M  +G ++K++S  K A      +SP G  +          
Sbjct: 83  NGKSLAFL--RDG--QIWKMDVDGKNRKQLSNSKIAIEGF-RFSPDGKKVLLIMSIPYYG 137

Query: 372 AIGVMKKD--GSQERLLVED---------------------------------------- 389
           +I     D   +  R++ +                                         
Sbjct: 138 SIKKNPSDLPLASGRVVTDLNYRHWDHYVETIAHPFVAELKNDKITEGIDILKGEPYESP 197

Query: 390 ----SNLQAPTWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTPAYASD 439
                 ++   WSP  +++ ++ RKK+G      T + +Y  ++       +  PA    
Sbjct: 198 LAPFGGIEQFAWSPDSKNVAYTCRKKEGVDYAISTDADIYLYNIESGKTINLCKPADYKA 257

Query: 440 PQ 441
           P+
Sbjct: 258 PK 259



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 58/338 (17%), Positives = 110/338 (32%), Gaps = 95/338 (28%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        L V D +G N   LT        +  +  N + +A+         +++ 
Sbjct: 44  YSVKENKGHQILYVSDSNGKNKIQLTQDAKS-ESDVAWIENGKSLAFLRDG-----QIWK 97

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--ISVQKDEAMDIYSVDLQSNATERLTN 299
           MD    +  K++ N +  I   RFS +GK+ L  +S+    ++     DL   +   +T+
Sbjct: 98  MDVD-GKNRKQLSNSKIAIEGFRFSPDGKKVLLIMSIPYYGSIKKNPSDLPLASGRVVTD 156

Query: 300 --------------------------TLFINI-------SA----------SYSPDSSQI 316
                                     T  I+I       S           ++SPDS  +
Sbjct: 157 LNYRHWDHYVETIAHPFVAELKNDKITEGIDILKGEPYESPLAPFGGIEQFAWSPDSKNV 216

Query: 317 VFE-SDREGKE-------QLYVMQSNGSDQKRISQDKE---------------------- 346
            +    +EG +        +Y+          + +  +                      
Sbjct: 217 AYTCRKKEGVDYAISTDADIYLYNIESGKTINLCKPADYKAPKVDPTKSLKDQAVNHQNG 276

Query: 347 ----ASYFDPVWSPQGDLIAFTKFSGEKFA-------IGVMKKDGSQERLLVEDSNLQAP 395
                   +P +SP G+ IA+     + +        I  +KK   +      DSN+   
Sbjct: 277 DFNVGYDINPKFSPDGNYIAWQSMERDGYESDRNRLCIYNIKKGTKKYVTETFDSNVDDY 336

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            W+ + ++L F    +  T   +Y  +LNG  + L + 
Sbjct: 337 CWANNSKTLYFIGVWEATTM--VYQTNLNGEIKQLTDG 372



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 39/112 (34%), Gaps = 5/112 (4%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIG 254
           D A               P+FSP+   +A+ + +      D  R+ + + +         
Sbjct: 268 DQAVNHQNGDFNVGYDINPKFSPDGNYIAWQSMERDGYESDRNRLCIYNIKKGTKKYVTE 327

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            F S +    +++N K        +    +Y  +L     ++LT+  +   S
Sbjct: 328 TFDSNVDDYCWANNSKTLYFIGVWEATTMVYQTNLN-GEIKQLTDGWYDYGS 378


>gi|242210975|ref|XP_002471328.1| hypothetical WD-repeat protein [Postia placenta Mad-698-R]
 gi|220729612|gb|EED83483.1| hypothetical WD-repeat protein [Postia placenta Mad-698-R]
          Length = 259

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 73/230 (31%), Gaps = 23/230 (10%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG   +++ + D                +    FSP+   +A  + D      + L +
Sbjct: 19  VASGYEDSTIILWDPATGGRITELRGHTDTICALAFSPDSSLLASGSRD----CSIILWN 74

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLF 302
                    +      I    FS +GK+   S   D  + I+  D++    + L      
Sbjct: 75  VVAGEKTIALNGHDGFIDTLAFSPDGKKLA-SGSVDFTVRIW--DVERGEQQSLCKAHNA 131

Query: 303 INISASYSPDSSQIVFESDREGKEQL--YVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           + +  ++SPD +Q+       G       V  +    +  + +  +       +SP G  
Sbjct: 132 LVMVVTFSPDGTQLA-----SGSADCDTRVWDAETGMEISVLKGHQGVVHSVQFSPDGCR 186

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLV-----EDSNLQAPTWSPSGRSLI 405
           +A     G      V      ++ ++          + A  +S  G  + 
Sbjct: 187 LATASDDGTSV---VWHAKSGEKLIIFREHFATQDMVNAAVFSDDGEFVA 233



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 65/196 (33%), Gaps = 14/196 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SPN   VA    D      + L D         +      I A  FS +    L S  
Sbjct: 11  AYSPNGLYVASGYEDS----TIILWDPATGGRITELRGHTDTICALAFSPD-SSLLASGS 65

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D ++ +++V +    T  L        + ++SPD  ++   S       + +      +
Sbjct: 66  RDCSIILWNV-VAGEKTIALNGHDGFIDTLAFSPDGKKLASGSV---DFTVRIWDVERGE 121

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAP 395
           Q+ + +   A      +SP G  +A      +     V   +   E   L      + + 
Sbjct: 122 QQSLCKAHNALVMVVTFSPDGTQLASGSADCDT---RVWDAETGMEISVLKGHQGVVHSV 178

Query: 396 TWSPSGRSLIFSRKKD 411
            +SP G  L  +    
Sbjct: 179 QFSPDGCRLATASDDG 194



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 52/152 (34%), Gaps = 10/152 (6%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            R  + A  +S NG    ++   +++  I            L        + ++SPDSS 
Sbjct: 3   HRGSVCALAYSPNG--LYVASGYEDSTIILWDPATGGRITELRGHTDTICALAFSPDSSL 60

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +   S       + +      ++       +       +SP G  +A        F + +
Sbjct: 61  LASGSR---DCSIILWNVVAGEKTIALNGHDGFIDTLAFSPDGKKLASGSVD---FTVRI 114

Query: 376 MKKDGSQERLL--VEDSNLQAPTWSPSGRSLI 405
              +  +++ L    ++ +   T+SP G  L 
Sbjct: 115 WDVERGEQQSLCKAHNALVMVVTFSPDGTQLA 146


>gi|145219124|ref|YP_001129833.1| WD-40 repeat-containing protein [Prosthecochloris vibrioformis DSM
           265]
 gi|145205288|gb|ABP36331.1| WD-40 repeat-containing protein [Chlorobium phaeovibrioides DSM
           265]
          Length = 319

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 84/248 (33%), Gaps = 31/248 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   +++ + D       ++    D  +    FSP+ + VA  + D      + L +  
Sbjct: 93  SGSTDSTVRIWDAAAGTCSHVCKGHDTAVRMVSFSPDSKTVASCSRDT----TIRLWEVE 148

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +        +S I    FS +G + +      E   +   D+ +       N+     
Sbjct: 149 TGKEKALFQGHKSYIECLAFSHDGTKIV---SCGEEPVVKVWDVATGK-----NSANYET 200

Query: 306 S------ASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   ++SPD   I F     G++ ++ ++ +       + +  + +     +SP G
Sbjct: 201 GDKLSHTVAFSPDDRFIAF----GGRDAKVRILDAANGSVVHVLEAHQDAVRGLCFSPDG 256

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGS 416
            +IA          + +      +         L+  +   SP G++++       D   
Sbjct: 257 AMIASAANDES---VRLWDTASGKLLHTYRGHVLEVQSVDISPDGKTIVSGSD---DRKI 310

Query: 417 KLYSIDLN 424
           K++ I   
Sbjct: 311 KIWGITTT 318



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 68/209 (32%), Gaps = 16/209 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N++         +   RFS +  K+A   +D+     V L D         +    + +
Sbjct: 24  ENLKATLEGHLDRVLGVRFSADGTKIASGGFDE----LVMLWDVASGSVIHTMKGHETWV 79

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE 319
               +S +G+    S   D  + I+  D  +     +       +   S+SPDS  +   
Sbjct: 80  ECIDYSRDGRWIA-SGSTDSTVRIW--DAAAGTCSHVCKGHDTAVRMVSFSPDSKTVASC 136

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S       + + +     +K + Q  ++      +S  G  I      GE+  + V    
Sbjct: 137 SR---DTTIRLWEVETGKEKALFQGHKSYIECLAFSHDGTKIVSC---GEEPVVKVWDVA 190

Query: 380 GSQ--ERLLVEDSNLQAPTWSPSGRSLIF 406
             +        D       +SP  R + F
Sbjct: 191 TGKNSANYETGDKLSHTVAFSPDDRFIAF 219



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 75/291 (25%), Gaps = 33/291 (11%)

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS-------PASWRKIAH 156
             LG +    G   K           LWDV     I   K   +           R IA 
Sbjct: 36  RVLGVRFSADG--TKIASGGFDELVMLWDVASGSVIHTMKGHETWVECIDYSRDGRWIAS 93

Query: 157 -------TISDDIYQSITGEKGDFNSRILFVSESVVSG-----IIKNSLCVMDRDGANIR 204
                   I D    + +      ++ +  VS S  S          ++ + + +    +
Sbjct: 94  GSTDSTVRIWDAAAGTCSHVCKGHDTAVRMVSFSPDSKTVASCSRDTTIRLWEVETGKEK 153

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L       +    FS +  K+        +   V + D    +          +     
Sbjct: 154 ALFQGHKSYIECLAFSHDGTKIVSC----GEEPVVKVWDVATGKNSANYETGDKLSHTVA 209

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           FS + +             +  +D  + +    L           +SPD + I   ++  
Sbjct: 210 FSPDDRFIAF---GGRDAKVRILDAANGSVVHVLEAHQDAVRGLCFSPDGAMIASAAN-- 264

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             E + +  +         +           SP G  I  +     K  I 
Sbjct: 265 -DESVRLWDTASGKLLHTYRGHVLEVQSVDISPDGKTIV-SGSDDRKIKIW 313


>gi|170116140|ref|XP_001889262.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164635753|gb|EDR00056.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1423

 Score = 71.2 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 83/274 (30%), Gaps = 41/274 (14%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            SL V D               ++    FS +  ++   + D      V + D       K
Sbjct: 1043 SLRVWDASTGVQLKELNGHTSLVASVAFSSDGTQIVSGSRDK----SVRVWDASTGVELK 1098

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYS 310
             +      I +  FSS+G R + S  +D+++ ++  D  +    + L        S ++S
Sbjct: 1099 ELKGHTGSINSVAFSSDGTRIV-SGSRDKSVRVW--DASTGVELKELKGHTDGIHSVAFS 1155

Query: 311  PDSSQI-----------------VFESD------REGKEQLYVMQSNGSDQKRISQDKEA 347
             D +QI                  F SD          + + V  ++   + +  +    
Sbjct: 1156 SDGTQIVSGSCDYSLRVWDASTVAFSSDGTQIVSGSSDKSVRVWDASTGVELKELKGHTG 1215

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
            S     +S  G  I           + V       E   L      + +  +S  G  ++
Sbjct: 1216 SINSVAFSSDGTRIVSGSRDKS---VRVWDASTGVELKELKGHTGEVNSVAFSSDGTQIV 1272

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                  G     L   D +  + T I + +    
Sbjct: 1273 -----SGSYDYSLRVWDASTGDGTRIVSGSNDRS 1301



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 78/236 (33%), Gaps = 22/236 (9%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             +VSG    S+ V D            + +I+    FS +  ++   + D      V + 
Sbjct: 894  RIVSGSYDKSVRVWDASTGVELKKLKGQTRIVNSVAFSSDGTRIVSGSSD----YSVRVW 949

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            D       K +      + +  FSS+G   + S  +DE++ ++ V +     + L     
Sbjct: 950  DASTGVELKELTGHTDSVNSVTFSSDGTWIV-SGSRDESVRVWDVSI-GVELKALKGHTD 1007

Query: 303  INISASYSPDSSQI------VFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFD 351
               S ++S D +QI      +FE             L V  ++   Q +      +    
Sbjct: 1008 TVNSVAFSRDGTQIPYPIGHIFERWDTHCVWLVGHSLRVWDASTGVQLKELNGHTSLVAS 1067

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
              +S  G  I           + V       E   L     ++ +  +S  G  ++
Sbjct: 1068 VAFSSDGTQIVSGSRDKS---VRVWDASTGVELKELKGHTGSINSVAFSSDGTRIV 1120



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/303 (13%), Positives = 88/303 (29%), Gaps = 49/303 (16%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD---IYQSITGEKG-D 172
             +          R+WD     ++  K+          +A   S D   I           
Sbjct: 1117 TRIVSGSRDKSVRVWDASTGVEL--KELKGHTDGIHSVA--FSSDGTQIVSGSCDYSLRV 1172

Query: 173  FNSRILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            +++  +  S      VSG    S+ V D                +    FS +  ++   
Sbjct: 1173 WDASTVAFSSDGTQIVSGSSDKSVRVWDASTGVELKELKGHTGSINSVAFSSDGTRIVSG 1232

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            + D      V + D       K +      + +  FSS+G + + S   D ++ ++  D 
Sbjct: 1233 SRDK----SVRVWDASTGVELKELKGHTGEVNSVAFSSDGTQIV-SGSYDYSLRVW--DA 1285

Query: 290  QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
             +    R+ +                    +DR     + V  ++  ++ R         
Sbjct: 1286 STGDGTRIVSG------------------SNDRS----VRVWDASTGEELRELTGHIGEV 1323

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPSGRSLIFSR 408
                +S  G  I           + V          ++ D + +   W       +I SR
Sbjct: 1324 TSVAFSSDGTRIVSGSRDES---VRVWNVSTG----ILSDGDARF-AWDLADSDWIISSR 1375

Query: 409  KKD 411
            +++
Sbjct: 1376 EQN 1378



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 56/167 (33%), Gaps = 30/167 (17%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-------- 234
             +VSG    S+ V D                +    FS +  ++   +YD          
Sbjct: 1228 RIVSGSRDKSVRVWDASTGVELKELKGHTGEVNSVAFSSDGTQIVSGSYDYSLRVWDAST 1287

Query: 235  ----------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
                      +   V + D       + +      + +  FSS+G R + S  +DE++ +
Sbjct: 1288 GDGTRIVSGSNDRSVRVWDASTGEELRELTGHIGEVTSVAFSSDGTRIV-SGSRDESVRV 1346

Query: 285  YSVDLQSNATERLTNTLFINISASYS-PDSSQIVFESDREGKEQLYV 330
            +  ++ +            +   ++   DS  I+  S RE    ++V
Sbjct: 1347 W--NVSTGIL------SDGDARFAWDLADSDWII--SSREQNPFMWV 1383


>gi|258571295|ref|XP_002544451.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237904721|gb|EEP79122.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 903

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 59/167 (35%), Gaps = 16/167 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  K+A A+ D      V + D R      ++ N    +    +S +  +  IS  +
Sbjct: 593 FSHDGTKLATASRDR----SVIIYDVRTFSVIHKLSNHDGPVAFAAWSPDDTKL-ISCSQ 647

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D    ++  ++++     LT  +      SA+++PD    V  S  + + QL +    G 
Sbjct: 648 DYKARVW--NVETGRCS-LTIDHHHEPVTSAAWAPDGKTFVTCSL-DNQSQLCLWNVRGD 703

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              R      A   D   S  G  +           I V      +E
Sbjct: 704 ALHR--WPGAARIRDCAISADGKRLVAISADKS---IHVYNFQTREE 745



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/200 (11%), Positives = 67/200 (33%), Gaps = 13/200 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     S+ + D    ++ +   + D  +    +SP+  K+   + D +      + +  
Sbjct: 602 TASRDRSVIIYDVRTFSVIHKLSNHDGPVAFAAWSPDDTKLISCSQDYK----ARVWNVE 657

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R    I +    + +  ++ +GK   ++   D    +   +++ +A  R         
Sbjct: 658 TGRCSLTIDHHHEPVTSAAWAPDGKT-FVTCSLDNQSQLCLWNVRGDALHRWP-GAARIR 715

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             + S D  ++V  S     + ++V      +++  S   +        S     +    
Sbjct: 716 DCAISADGKRLVAIS---ADKSIHVYNFQTREEE-YSMLLKLDVTCINISRDSKYMLVNM 771

Query: 366 FSGEKFAIGVMKKDGSQERL 385
             G    + ++  + ++   
Sbjct: 772 SQG---EVQLLDLETAEVVR 788



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 43/133 (32%), Gaps = 11/133 (8%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +S D +++   + R+    +Y              + +       WSP    +       
Sbjct: 593 FSHDGTKLA-TASRDRSVIIY--DVRTFSVIHKLSNHDGPVAFAAWSPDDTKLISCSQD- 648

Query: 369 EKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             +   V   +  +  L ++  +  + +  W+P G++ +       D  S+L   ++ G 
Sbjct: 649 --YKARVWNVETGRCSLTIDHHHEPVTSAAWAPDGKTFVTCSL---DNQSQLCLWNVRGD 703

Query: 427 NETLINTPAYASD 439
                   A   D
Sbjct: 704 ALHRWPGAARIRD 716


>gi|150010309|ref|YP_001305052.1| hypothetical protein BDI_3743 [Parabacteroides distasonis ATCC
           8503]
 gi|149938733|gb|ABR45430.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 490

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 61/195 (31%), Gaps = 48/195 (24%)

Query: 263 PRFSSNGKRALISVQK----------------DEAMDIYSVDLQSNATER---LTNTLFI 303
           P +  +GK    SV K                D A D+   D Q +       L++    
Sbjct: 225 PSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDSASDVVVYDTQKHEIVTSPLLSSEGAF 284

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD------------ 351
               ++SPD + + F S +  +           D   +S D     F             
Sbjct: 285 ETFPTFSPDGNTLYFCSAKA-RTMPKEYDQVRYDLCSVSFDPATRRFGTVVDTLYKASEI 343

Query: 352 ------PVWSPQGDLIAFTKFSGEKFAIGVMKKD---------GSQERLLVEDSNLQAP- 395
                 P  SP G  + +T      F+I     D          S     V   ++++  
Sbjct: 344 DKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLYMIDLSTLRSYPLEAVNSDDVESYH 403

Query: 396 TWSPSGRSLIFSRKK 410
           +WS   R ++FS ++
Sbjct: 404 SWSSDSRWIVFSSRR 418



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 49/142 (34%), Gaps = 25/142 (17%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM------DTRIDRAPKRIGNF--- 256
           L  S       P FSP+   + + +     + + Y            D A +R G     
Sbjct: 277 LLSSEGAFETFPTFSPDGNTLYFCSAKARTMPKEYDQVRYDLCSVSFDPATRRFGTVVDT 336

Query: 257 -------RSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLF 302
                     +  PR S +GK  L ++             D+Y +DL +  +  L     
Sbjct: 337 LYKASEIDKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLYMIDLSTLRSYPLEAVNS 396

Query: 303 INIS--ASYSPDSSQIVFESDR 322
            ++    S+S DS  IVF S R
Sbjct: 397 DDVESYHSWSSDSRWIVFSSRR 418



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 61/222 (27%), Gaps = 50/222 (22%)

Query: 194 CVMDRDGANIRYLTPSRDQ---ILFEPRFSPNQQKVAYATYDDEDILR------------ 238
           C +  DG  +  L    DQ    L  P + P+ + VA++    +                
Sbjct: 199 CTLLIDGDRVEKLNTKTDQTLSPLVYPSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDS 258

Query: 239 -----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE---------AMDI 284
                VY            + +  +    P FS +G        K             D+
Sbjct: 259 ASDVVVYDTQKHEIVTSPLLSSEGAFETFPTFSPDGNTLYFCSAKARTMPKEYDQVRYDL 318

Query: 285 YSVDLQ------SNATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSN- 334
            SV             + L     I+ S      SPD   +++     G   ++   ++ 
Sbjct: 319 CSVSFDPATRRFGTVVDTLYKASEIDKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADL 378

Query: 335 ---------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
                        + ++ D   SY    WS     I F+   
Sbjct: 379 YMIDLSTLRSYPLEAVNSDDVESY--HSWSSDSRWIVFSSRR 418



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 59/194 (30%)

Query: 307 ASYSPDSSQIVFE----------SDR------EGKEQLYVMQSNGSD--QKRISQDKEAS 348
            S+ P    + F           +DR      +    + V  +   +     +   + A 
Sbjct: 225 PSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDSASDVVVYDTQKHEIVTSPLLSSEGAF 284

Query: 349 YFDPVWSPQGDLIAFTK---------FSGEKFAIGVMKKD------GSQERLLVE----D 389
              P +SP G+ + F           +   ++ +  +  D      G+    L +    D
Sbjct: 285 ETFPTFSPDGNTLYFCSAKARTMPKEYDQVRYDLCSVSFDPATRRFGTVVDTLYKASEID 344

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTG-----SKLYSIDLNGRNETLINTP---------- 434
            ++  P  SP G+ L+++    G+       + LY IDL+    TL + P          
Sbjct: 345 KSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLYMIDLS----TLRSYPLEAVNSDDVE 400

Query: 435 ---AYASDPQWVGF 445
              +++SD +W+ F
Sbjct: 401 SYHSWSSDSRWIVF 414


>gi|119472121|ref|ZP_01614352.1| Dipeptidyl peptidase IV [Alteromonadales bacterium TW-7]
 gi|119445141|gb|EAW26434.1| Dipeptidyl peptidase IV [Alteromonadales bacterium TW-7]
          Length = 741

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 67/191 (35%), Gaps = 49/191 (25%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAP------------- 263
           +FSP+  +V Y     +D  R  L +  ++    + + +   +   P             
Sbjct: 46  KFSPDGSRVTYLQGKTDDYNRYDLWEYNLEDNTNRVLVDSAELFSGPENLSDEEKARRER 105

Query: 264 -----------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                       +S++GK  L  +  D    +Y  DL S  +++LTNT      A +SP 
Sbjct: 106 QRIFGKGILEYTWSTDGKALLFPLNGD----LYYYDLASAKSKKLTNTDAFETDARFSPK 161

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA----------------SYFDPVWSP 356
            + + F  +    + LY +  N   + ++SQD                         WS 
Sbjct: 162 GNYVSFIRE----QNLYALALNSGKEIQLSQDGGGVIKNGMAEFVAQEEMSRMTGYWWSG 217

Query: 357 QGDLIAFTKFS 367
               IA+T+  
Sbjct: 218 DETKIAYTRVD 228



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 57/177 (32%), Gaps = 35/177 (19%)

Query: 265 FSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           FS +G R              D++  +L+ N    L +              S  +F   
Sbjct: 47  FSPDGSRVTYLQGKTDDYNRYDLWEYNLEDNTNRVLVD--------------SAELF--- 89

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G E L   +    +++RI       Y    WS  G  + F         +       +
Sbjct: 90  -SGPENLSDEEKARRERQRIFGKGILEYT---WSTDGKALLF----PLNGDLYYYDLASA 141

Query: 382 QERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           + + L      +    +SP G  + F R+++      LY++ LN   E  ++     
Sbjct: 142 KSKKLTNTDAFETDARFSPKGNYVSFIREQN------LYALALNSGKEIQLSQDGGG 192



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 75/199 (37%), Gaps = 18/199 (9%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR- 218
           ++IY     E   FN R  F      +  +K  L V+  +  ++ ++   +D+ ++  R 
Sbjct: 238 NEIYA---DEVKLFNQRYPF----TGTDNVKIQLGVVKLNNQHVDWIDLGKDEDIYIARA 290

Query: 219 -FSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRA 272
            +  + + ++Y      +  L +   D+   +    +      + ++     F  + K  
Sbjct: 291 KWLKDSKTLSYQWQNRSQQTLELRFYDSESKQQKVALTENSDTWINLHFDLVFLKDKKHF 350

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE---QLY 329
           + + ++D    +Y          ++T+  +   S     +   IV+ + R+       LY
Sbjct: 351 VWASERDGFKHLYLYRTNGQLVRQITSGDWAVDSLKGIDEKKGIVYFAGRKDTPLESHLY 410

Query: 330 VMQS-NGSDQKRISQDKEA 347
                   D KRI+++ + 
Sbjct: 411 SAPLFKKGDSKRITEEGQY 429



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 74/234 (31%), Gaps = 41/234 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMD---------------TRIDRAPKRIGNFRSMILA 262
            +S ++ K+AY   D+  +      +               T  D    ++G  +     
Sbjct: 214 WWSGDETKIAYTRVDESPVKEAIRNEIYADEVKLFNQRYPFTGTDNVKIQLGVVKLNNQH 273

Query: 263 ----------------PRFSSNGKRALISVQK--DEAMDIYSVDLQSNATER-LT--NTL 301
                            ++  + K      Q    + +++   D +S   +  LT  +  
Sbjct: 274 VDWIDLGKDEDIYIARAKWLKDSKTLSYQWQNRSQQTLELRFYDSESKQQKVALTENSDT 333

Query: 302 FINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +IN+     +  D    V+ S+R+G + LY+ ++NG   ++I+    A         +  
Sbjct: 334 WINLHFDLVFLKDKKHFVWASERDGFKHLYLYRTNGQLVRQITSGDWAVDSLKGIDEKKG 393

Query: 360 LIAFTKFSGEKFAIGVMKK---DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           ++ F           +           + + E+        +   ++ I +   
Sbjct: 394 IVYFAGRKDTPLESHLYSAPLFKKGDSKRITEEGQYHNVVLAKDNKTFIDTSSS 447


>gi|301308204|ref|ZP_07214158.1| putative Cytochrome c binding protein [Bacteroides sp. 20_3]
 gi|300833674|gb|EFK64290.1| putative Cytochrome c binding protein [Bacteroides sp. 20_3]
          Length = 492

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 73/470 (15%), Positives = 143/470 (30%), Gaps = 109/470 (23%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIG---GFFPTSIHAFVKVATN-SANYSPVSIAFTKFV 56
           M  + +      + + L  L+V           S++  + +  +      PV+IA   F 
Sbjct: 1   MERQTYTNTNRYLFLFLIALMVSCSKSDVQIAKSLNKEIAIYPDYKDVTIPVNIAPLNFS 60

Query: 57  SIDEL-------GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
             D         G K    V  D     +F  I Q                + W +L   
Sbjct: 61  IADSSEHCLIIKGEKTQLQVYSD---EGLFE-IPQ----------------KRWKAL--- 97

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
                 + +   +++ +          K+I G+    +P     +  +I   I   +   
Sbjct: 98  ------LKENAGNQIELTI-------AKRIQGEWNAYTPFHMDIVNDSIDKYIAYRLLAL 144

Query: 170 KGDFNSRILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             D  +R+     ++ +          + D +  N    +      +    F    +   
Sbjct: 145 SNDMWNRMGIYQRNLENYDQSVIYENSLTDYNCVNCHTFSSGNPDKMI---FHMRGKHAG 201

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--------- 278
               D + I ++        + P+ + NF  M     +  NG     +V           
Sbjct: 202 SVLIDGKKITKLN------TKTPETVSNFVYMY----WHPNGNYLAATVCDTYQNFFINN 251

Query: 279 -------DEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESD------- 321
                  D   DI   D++ N     E L +     I  ++SPD   + F S        
Sbjct: 252 PNTLEVLDHNSDIVIYDVKKNEVFSCEALNSKDAWQIFPAFSPDGKSLYFSSTAAVDSIS 311

Query: 322 ---REGKEQLYVMQSNG-----SDQKRISQDKEASY---FDPVWSPQGDLIAFTKFSGEK 370
              R+    L  +  +        Q     +  A++     P  SP G  +AFT      
Sbjct: 312 KNFRQMTYSLCRVDFDPETRTLGQQVDTLYNGRANHKSVSFPRISPDGKYLAFTLQEYGG 371

Query: 371 F-------AIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKK 410
           F        + +++    +   L E ++ +     +WS + R L+FS ++
Sbjct: 372 FGVWHKDAELYMIRLSDGKTYPLSEANSAEGESYHSWSHNNRWLVFSSRR 421



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 69/213 (32%), Gaps = 56/213 (26%)

Query: 289 LQSNATERL-TNTL---FINISASYSPDSSQIV----------FESDR------EGKEQL 328
           +      +L T T       +   + P+ + +           F ++       +    +
Sbjct: 205 IDGKKITKLNTKTPETVSNFVYMYWHPNGNYLAATVCDTYQNFFINNPNTLEVLDHNSDI 264

Query: 329 YVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTK----------FSGEKFAIGVM 376
            +     ++         K+A    P +SP G  + F+           F    +++  +
Sbjct: 265 VIYDVKKNEVFSCEALNSKDAWQIFPAFSPDGKSLYFSSTAAVDSISKNFRQMTYSLCRV 324

Query: 377 KKD------GSQERLLVEDSNLQ----APTWSPSGRSLIFSRKKDGDTG-----SKLYSI 421
             D      G Q   L            P  SP G+ L F+ ++ G  G     ++LY I
Sbjct: 325 DFDPETRTLGQQVDTLYNGRANHKSVSFPRISPDGKYLAFTLQEYGGFGVWHKDAELYMI 384

Query: 422 DL-NGRNETLINTP--------AYASDPQWVGF 445
            L +G+   L            +++ + +W+ F
Sbjct: 385 RLSDGKTYPLSEANSAEGESYHSWSHNNRWLVF 417


>gi|298242841|ref|ZP_06966648.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297555895|gb|EFH89759.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 734

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 86/256 (33%), Gaps = 32/256 (12%)

Query: 174 NSRILFVSESVVSGIIKNSLCV---MDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAY 228
           + +I++ S     G    S+     +       + +   +  I+    P +SP+ Q+ A 
Sbjct: 414 DPKIIYSSAIAPDGRTCVSIATNIFLIWYIHTEQTIWAGKADIIPQVRPAWSPDSQRFAT 473

Query: 229 ATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-----M 282
           A  D    +  +    +     P    +   +     +S NGK   I+ QKD        
Sbjct: 474 AVGDGSITIWDWQKQQKAQIVEPNAYSSANEVSTHLAWSPNGKYLAIA-QKDGESQVTHF 532

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD----- 337
            I  +  +      +T    I +   +SPDS ++   ++     Q + +  +        
Sbjct: 533 QILYLPTKQVIANYITPHEAI-LGLDWSPDSKRLA-TNNTHNTLQDWEIGVSRQPTHTYM 590

Query: 338 -QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP- 395
             +  S   + +     WSP G  IA   ++G    + +      Q      D     P 
Sbjct: 591 FPQTQSNPPDHNDAVVRWSPDGRWIAAAPYAG---PLSLWSPTTKQA--FTFDPIASEPR 645

Query: 396 ------TWSPSGRSLI 405
                  WSP GR++ 
Sbjct: 646 SIFSDLAWSPDGRTIA 661



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 60/181 (33%), Gaps = 31/181 (17%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF---RSMILAP 263
             S +++     +SPN + +A A  D E   +V           + I N+      IL  
Sbjct: 499 YSSANEVSTHLAWSPNGKYLAIAQKDGES--QVTHFQILYLPTKQVIANYITPHEAILGL 556

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----------FINISASYSPD 312
            +S + KR                D +   + + T+T              +    +SPD
Sbjct: 557 DWSPDSKRLA-----TNNTHNTLQDWEIGVSRQPTHTYMFPQTQSNPPDHNDAVVRWSPD 611

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-----YFDPVWSPQGDLIAFTKFS 367
              I   +   G   L+    + + ++  + D  AS     + D  WSP G  IA     
Sbjct: 612 GRWIA-AAPYAGPLSLW----SPTTKQAFTFDPIASEPRSIFSDLAWSPDGRTIAAVDQK 666

Query: 368 G 368
            
Sbjct: 667 N 667



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 57/178 (32%), Gaps = 19/178 (10%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +  +  +    P+ + N   +I +   + +G+  +       A +I+ +           
Sbjct: 397 IAYLKAQETAIPENVLNDPKIIYSSAIAPDGRTCVSI-----ATNIFLIWYIHTEQTIWA 451

Query: 299 NTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---- 352
               I   +  ++SPDS +        G   + +       + +I +    S  +     
Sbjct: 452 GKADIIPQVRPAWSPDSQRFA---TAVGDGSITIWDWQKQQKAQIVEPNAYSSANEVSTH 508

Query: 353 -VWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             WSP G  +A  +  GE     F I  +         +     +    WSP  + L 
Sbjct: 509 LAWSPNGKYLAIAQKDGESQVTHFQILYLPTKQVIANYITPHEAILGLDWSPDSKRLA 566


>gi|291568227|dbj|BAI90499.1| serine/threonine protein kinase with WD-40 repeats [Arthrospira
           platensis NIES-39]
          Length = 803

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 88/254 (34%), Gaps = 22/254 (8%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG   N++ + + + G NI  L      IL    FS +  ++A  T    +  R+   + 
Sbjct: 541 SGSRDNTIKLWNTQTGENISTLAGDGSAILSV-NFSNDGIELASGT----EFWRILEWNL 595

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFI 303
           +       +    + IL  + S N +    S   D  + ++  D ++       T     
Sbjct: 596 QTRELYLPL-EHSAPILTVQISPNNRNIA-SGSADNTVRVW--DRRTGQVLYNHTEHSET 651

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               ++SP+   +V  S   G   ++V+     + +   Q           +P G+ I  
Sbjct: 652 VYGVAFSPNGRWLVTGS---GDRTIHVIDLEMRELRHRLQGHNGEVRTVAITPDGENIIS 708

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    I V      +E + +     +  +   SP    +  S +   D   K++++
Sbjct: 709 GSSDNT---IKVWDLQTGEETITLTGHQGEVLSVAVSPDATQIASSSR---DRTVKIWNL 762

Query: 422 DLNGRNETLINTPA 435
                  TL + PA
Sbjct: 763 STGDLLNTLTDIPA 776



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 71/181 (39%), Gaps = 11/181 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++ SG   N++ V DR    + Y      + ++   FSPN + +   + D      +++
Sbjct: 620 RNIASGSADNTVRVWDRRTGQVLYNHTEHSETVYGVAFSPNGRWLVTGSGDR----TIHV 675

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
           +D  +     R+      +     + +G+   IS   D  + ++  DLQ+      LT  
Sbjct: 676 IDLEMRELRHRLQGHNGEVRTVAITPDGENI-ISGSSDNTIKVW--DLQTGEETITLTGH 732

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +S + SPD++QI   S R+   +++    +  D      D  A      +     L
Sbjct: 733 QGEVLSVAVSPDATQIA-SSSRDRTVKIW--NLSTGDLLNTLTDIPAVINSVFFVDDETL 789

Query: 361 I 361
           I
Sbjct: 790 I 790


>gi|291569687|dbj|BAI91959.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 1415

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 97/270 (35%), Gaps = 26/270 (9%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG I   + + D +              +    FSP+ + +A  + D      + L D  
Sbjct: 889  SGSIDGKVQLWDINSGKCLAFLQGHTSWINRIVFSPDGEMLATTSKDT----NIKLWDVV 944

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQS-NATERLTNTLFI 303
              +    + + +  +    FS +  + L S   D  + ++ + D+ + +    ++     
Sbjct: 945  NGKCVNTLVDHQEEVWGVAFSPD-SQILASGSADGTIKLWQIADINNISVAASISAHDSD 1003

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDP-VWSPQGDL 360
                ++SP+   +   S   G     +   +     ++  +  +  S+ D  V++P G +
Sbjct: 1004 LRGLAFSPNGKILASGS---GDLTAKLWDVSDIHHPQLLNTLQEHTSWIDEIVFTPDGKI 1060

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKL 418
            +A      +     V   +  +   ++        +  +SP G++L        D   ++
Sbjct: 1061 LAMCAADKKVSLWNVQNINNIKLNSILGGWCNWIRSIVFSPDGKTLASGSD---DYYIRI 1117

Query: 419  YSI-------DLNGRNETLINTPAYASDPQ 441
            + I       +L G  E  + + A++ D Q
Sbjct: 1118 WDIETGDILANLRGHKER-VQSVAFSPDGQ 1146



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 88/246 (35%), Gaps = 18/246 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ SG     + + D +  +I        + +    FSP+ Q +A A+ D      V  
Sbjct: 1104 KTLASGSDDYYIRIWDIETGDILANLRGHKERVQSVAFSPDGQTIASASRD----FTVRC 1159

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                  +    +    + + A  FS +  + L+S   D  + +++V    N    + +  
Sbjct: 1160 WSVDDHKCLTTLRAHTNQLYAVAFSYD-HQLLVSAGDDRTIKLWNVRPTPNLINEINHYP 1218

Query: 302  FINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                + ++SPDS +I       G + +  V   N        +  +       +SP G+L
Sbjct: 1219 CKIFTVAFSPDSQKIA----VGGSDNIVQVWDINFQQTSLKFRGHQGEIISVNFSPNGEL 1274

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKL 418
            +A +        + +      +   +     +     ++SP G+ L        +   +L
Sbjct: 1275 LASSSNDNT---VRLWDVKTQECLAIFPGQQVWTYLISFSPDGQLLA---SGGENNTVRL 1328

Query: 419  YSIDLN 424
            + +  +
Sbjct: 1329 WDVRTH 1334



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 47/311 (15%), Positives = 102/311 (32%), Gaps = 43/311 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ +  G D   +  R+WD++    +         A+ R   H   + +        G  
Sbjct: 1103 GKTLASGSDDYYI--RIWDIETGDIL---------ANLR--GHK--ERVQSVAFSPDG-- 1145

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    +++ S     ++     D         +    L+   FS + Q +       
Sbjct: 1146 --------QTIASASRDFTVRCWSVDDHKCLTTLRAHTNQLYAVAFSYDHQLLV----SA 1193

Query: 234  EDILRVYLMDTR-IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             D   + L + R        I ++   I    FS + ++  +    D  + ++ ++ Q  
Sbjct: 1194 GDDRTIKLWNVRPTPNLINEINHYPCKIFTVAFSPDSQKIAVGGS-DNIVQVWDINFQQT 1252

Query: 293  ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            + +         IS ++SP+   +   S+      + +      +   I   ++   +  
Sbjct: 1253 SLK-FRGHQGEIISVNFSPNGELLASSSN---DNTVRLWDVKTQECLAIFPGQQVWTYLI 1308

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKK 410
             +SP G L+A     GE   + +      +             A  +SP G +L  S   
Sbjct: 1309 SFSPDGQLLA---SGGENNTVRLWDVRTHECYATFNGHQSWVLAVAFSPDGETLASSS-- 1363

Query: 411  DGDTGSKLYSI 421
              D   KL+++
Sbjct: 1364 -ADETIKLWNV 1373



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+ + +A  + D      + + D         +   +  + +  FS +G+    S  +
Sbjct: 1099 FSPDGKTLASGSDD----YYIRIWDIETGDILANLRGHKERVQSVAFSPDGQTIA-SASR 1153

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D  +  +SVD        L        + ++S D   +V      G ++   + +     
Sbjct: 1154 DFTVRCWSVD-DHKCLTTLRAHTNQLYAVAFSYDHQLLV----SAGDDRTIKLWNVRPTP 1208

Query: 339  KRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
              I++        F   +SP    IA    S     +  +    +  +       + +  
Sbjct: 1209 NLINEINHYPCKIFTVAFSPDSQKIA-VGGSDNIVQVWDINFQQTSLKFRGHQGEIISVN 1267

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSI 421
            +SP+G  L  S     D   +L+ +
Sbjct: 1268 FSPNGELLASSSN---DNTVRLWDV 1289



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 5/103 (4%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S    N++ + D        + P +    +   FSP+ Q +A       +   V L D R
Sbjct: 1277 SSSNDNTVRLWDVKTQECLAIFPGQQVWTYLISFSPDGQLLA----SGGENNTVRLWDVR 1332

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                       +S +LA  FS +G+    S   DE + +++V 
Sbjct: 1333 THECYATFNGHQSWVLAVAFSPDGETLA-SSSADETIKLWNVP 1374


>gi|290990179|ref|XP_002677714.1| predicted protein [Naegleria gruberi]
 gi|284091323|gb|EFC44970.1| predicted protein [Naegleria gruberi]
          Length = 589

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 98/282 (34%), Gaps = 46/282 (16%)

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI 162
           WN  G   L++G V             +WDV++ +  + ++F          AH  +  +
Sbjct: 344 WNKAG-NYLLSGSVDNTS--------IVWDVENNQ--VKQQF----------AHHSAPTL 382

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
                    D+ +   F + S         + V +   +N        +  +   R+SPN
Sbjct: 383 -------DVDWRTNTSFATCST-----DRMIYVYELGTSNPTRTFSGHEDEVNAIRWSPN 430

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS----SNGKRALISVQK 278
            + +A  + D    +  Y     +    +      ++  +P        N    L S   
Sbjct: 431 GKLLASCSDDFTAKIWSYDSQKCVWDFKEHTKEIYTIKWSPTGPGTDYPNKNTVLASASF 490

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSD 337
           D ++ ++   +       LT       S ++SPD   +   S DR     L++   +   
Sbjct: 491 DASIKLWD-PIAGKCLHSLTKHTDPVYSVAFSPDGKYLASGSFDR----YLHIWSVHDGK 545

Query: 338 QKRISQDKEASYFDPVWSPQGDLIA--FTKFSGEKFAIGVMK 377
             R +     S F+  W+  GD +A  F+    E+F + V+ 
Sbjct: 546 LVR-TYHGSGSIFEVCWNATGDKVAACFSNSITEEFNVCVLD 586



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 98/275 (35%), Gaps = 35/275 (12%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + +G       +   DG  +R +       +F  +++     +   + D+  I    +
Sbjct: 308 KRLATGSYDGKARIWSEDG-RLRCILDQHKGPIFSLKWNKAGNYLLSGSVDNTSI----V 362

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D   ++  ++  +  +  L   + +N   A  S  +     IY  +L ++   R  +  
Sbjct: 363 WDVENNQVKQQFAHHSAPTLDVDWRTNTSFATCSTDR----MIYVYELGTSNPTRTFSGH 418

Query: 302 FINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQG 358
              ++A  +SP+   +   SD +   +++        QK +   KE +   +   WSP G
Sbjct: 419 EDEVNAIRWSPNGKLLASCSD-DFTAKIWSYD----SQKCVWDFKEHTKEIYTIKWSPTG 473

Query: 359 ---------DLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSN-LQAPTWSPSGRSLIFS 407
                     ++A   F      I +     G     L + ++ + +  +SP G+ L   
Sbjct: 474 PGTDYPNKNTVLASASFDAS---IKLWDPIAGKCLHSLTKHTDPVYSVAFSPDGKYLA-- 528

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                D    ++S+  +G+     +      +  W
Sbjct: 529 -SGSFDRYLHIWSVH-DGKLVRTYHGSGSIFEVCW 561



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 74/186 (39%), Gaps = 18/186 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + +++A  +YD +   R++  D    R    +   +  I + +++  G   L S   
Sbjct: 303 WSGDGKRLATGSYDGK--ARIWSED---GRLRCILDQHKGPIFSLKWNKAGNYLL-SGSV 356

Query: 279 DEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D    ++  D+++N  ++   +     +   +  ++S     +DR     +YV +   S+
Sbjct: 357 DNTSIVW--DVENNQVKQQFAHHSAPTLDVDWRTNTSFATCSTDR----MIYVYELGTSN 410

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT- 396
             R     E       WSP G L+A      + F   +   D  +     ++   +  T 
Sbjct: 411 PTRTFSGHEDEVNAIRWSPNGKLLASCS---DDFTAKIWSYDSQKCVWDFKEHTKEIYTI 467

Query: 397 -WSPSG 401
            WSP+G
Sbjct: 468 KWSPTG 473



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 52/160 (32%), Gaps = 15/160 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +GKR   +   D    I+S D        L        S  ++   + ++  S    
Sbjct: 303 WSGDGKRLA-TGSYDGKARIWSED--GRLRCILDQHKGPIFSLKWNKAGNYLL--SGSVD 357

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + V     +  K+      A   D  W       +F   S ++  I V +   S   
Sbjct: 358 NTSI-VWDVENNQVKQQFAHHSAPTLDVDW---RTNTSFATCSTDRM-IYVYELGTSNPT 412

Query: 385 LLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSID 422
                   +     WSP+G+ L        D  +K++S D
Sbjct: 413 RTFSGHEDEVNAIRWSPNGKLLASCSD---DFTAKIWSYD 449


>gi|313156885|gb|EFR56323.1| peptidase, S9A/B/C family, catalytic domain protein [Alistipes sp.
           HGB5]
          Length = 711

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 49/322 (15%), Positives = 93/322 (28%), Gaps = 110/322 (34%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALI 274
            FSP+++++  A+   + I R     +    A   +        APR   FS + +    
Sbjct: 86  SFSPDERQILIAS-GSKPIYRHSYTTSYFLAAGNSLTPVLREAEAPRDASFSPDSRLIAY 144

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFIN-----------------ISA-SYSPDSSQI 316
           S + D    +Y  D  +  T R+T+    N                   A ++SPDS +I
Sbjct: 145 SDRND----LYVYDTAARQTRRITDDGAWNSVINGTTDWVYEEEFGFTKAYAFSPDSRRI 200

Query: 317 VF-------------------------------ESDREGKEQLYVMQSNGSDQKRISQDK 345
            +                                 +R    +++V       ++RI   +
Sbjct: 201 AYLRFDESQVPLMEMMRFDGKLYNQAYSFKYPKAGERNSTVEVWVCDLATGAKERIDTGR 260

Query: 346 EASYFDPV--WSPQGDLIAFT-KFSGEKFAIGVMKKDGSQ-------------------- 382
           E   + P   W+P G L  F        F + + + +G+Q                    
Sbjct: 261 ETDQYIPRIGWTPDGRLYFFRLNRRQNTFEVILCEPNGAQRTIYDERSQQYVERVDDSSL 320

Query: 383 ---------ERLLVEDSNLQAPTWS---------------------PSGRSLIFSRKKDG 412
                     R       +    +S                       G+ + +   +  
Sbjct: 321 TFVDKDRFLVRQESHTGYMHLYLYSIRRGFLAQVTKGDWEVTDVAGSDGKRVWYLSTETS 380

Query: 413 DTGSKLYSIDLNGRNETLINTP 434
                LYS+ L+G  +  + T 
Sbjct: 381 PLRRNLYSVRLDGTQKRRLTTG 402



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 80/264 (30%), Gaps = 46/264 (17%)

Query: 218 RFSPNQQKVAYATYDDEDIL------------------------------RVYLMDTRID 247
            FSP+ +++AY  +D+  +                                V++ D    
Sbjct: 192 AFSPDSRRIAYLRFDESQVPLMEMMRFDGKLYNQAYSFKYPKAGERNSTVEVWVCDLATG 251

Query: 248 RAPKRIGNFRSMILAPR--FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--- 302
              +      +    PR  ++ +G+     + + +      +   + A   + +      
Sbjct: 252 AKERIDTGRETDQYIPRIGWTPDGRLYFFRLNRRQNTFEVILCEPNGAQRTIYDERSQQY 311

Query: 303 ----INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                + S ++      +V +    G   LY+         ++++  +    D   S  G
Sbjct: 312 VERVDDSSLTFVDKDRFLVRQESHTGYMHLYLYSIRRGFLAQVTK-GDWEVTDVAGS-DG 369

Query: 359 DLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             + +  T+ S  +  +  ++ DG+Q+R L         T +PS     +          
Sbjct: 370 KRVWYLSTETSPLRRNLYSVRLDGTQKRRLTTGEGFY--TIAPSAGMKYYISTFSNAATP 427

Query: 417 KLYSI-DLNGRNETLINTPAYASD 439
               I D  G    L+       D
Sbjct: 428 NRVEICDGEGNPVRLLADSKALRD 451



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 39/127 (30%), Gaps = 18/127 (14%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAI-----GV 375
           EG   +    +     +R+     A+    D  +SP    I     S   +         
Sbjct: 54  EGSNIIRHSYAAAGPGERMLPSSAANLTITDYSFSPDERQILIASGSKPIYRHSYTTSYF 113

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +    S   +L E    +  ++SP  R + +S + D      LY  D   R    I    
Sbjct: 114 LAAGNSLTPVLREAEAPRDASFSPDSRLIAYSDRND------LYVYDTAARQTRRITD-- 165

Query: 436 YASDPQW 442
              D  W
Sbjct: 166 ---DGAW 169



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 70/229 (30%), Gaps = 21/229 (9%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLC------VMDRDGANIRYLTPSRDQILFEP 217
           Q I       + R+ F   +      +  LC          D  + +Y+    D  L   
Sbjct: 264 QYIPRIGWTPDGRLYFFRLNRRQNTFEVILCEPNGAQRTIYDERSQQYVERVDDSSLTFV 323

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--S 275
               ++ +           + +YL   R      ++      +     S +GKR     +
Sbjct: 324 ----DKDRFLVRQESHTGYMHLYLYSIRRG-FLAQVTKGDWEVTDVAGS-DGKRVWYLST 377

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-N 334
                  ++YSV L      RLT           +P +    + S          ++  +
Sbjct: 378 ETSPLRRNLYSVRLDGTQKRRLTTGEGFYT---IAPSAGMKYYISTFSNAATPNRVEICD 434

Query: 335 G-SDQKRISQDKEASYFDPVWS--PQGDLIAFTKFSGEKFAIGVMKKDG 380
           G  +  R+  D +A   +   +  PQ +   F    G+     ++K  G
Sbjct: 435 GEGNPVRLLADSKALRDELAAADRPQKEFFTFATERGDTLNAYIVKPRG 483


>gi|255932863|ref|XP_002557902.1| Pc12g10820 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582521|emb|CAP80709.1| Pc12g10820 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1617

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 58/333 (17%), Positives = 107/333 (32%), Gaps = 46/333 (13%)

Query: 108  AQVLVTGRVIKEGKDRLRVEFRLWDVKDRK----QIIGKKFFSSPASWRKIAHTISDDIY 163
            A  LV G  I    +   VE +  DV           G K  +S  S   +A    D + 
Sbjct: 1169 ASFLVDGETIATVTN--NVELQFIDVATGTCKLTLKHGNKICASSVSQNIVASGTVDGMV 1226

Query: 164  Q------SITGEKGDFNSRILFVSESVVS-----GIIKNSLCVMDRDGANIRYLTPSRDQ 212
            +            G  +  +  ++ S        G++  ++ + D      R        
Sbjct: 1227 RLWDTTGYWKQSPGGLDESVSSMAFSSDGKILAVGLVGKTVEIWDSFDKICRRRLEGHHD 1286

Query: 213  ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             +    FS + + +A  ++D        L D     A + +   R  +   +FS +GK  
Sbjct: 1287 RIATVAFSADNKTLASGSWD----CTFRLWDPTTGAAIRTVDTGRGKVHFVKFSPDGKML 1342

Query: 273  LISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGKE 326
             +S +  E     +V   D+ +   ++  ++     + ++S D   I+  S     +GK 
Sbjct: 1343 AVSTEDPEDPKSRTVTVWDVVTGTCKQTLDSGVYFHNLAFSHDGMVILMASTIHSSDGKT 1402

Query: 327  QLY---------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTKFSGEKFAIGV 375
            + +         V        K    +    +     SP G  IA  F+   G    I  
Sbjct: 1403 RDFNLQLDQGFRVWDVATGAWKLTVTETTEFFDSIAISPDGKTIASSFSSAPG----IQT 1458

Query: 376  MKKDGSQERLLVEDSNLQAP----TWSPSGRSL 404
                    R  +E    +      ++S  GR L
Sbjct: 1459 WDASTGDARQFIEYDEYKVVNQNLSFSDDGRYL 1491



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 76/203 (37%), Gaps = 18/203 (8%)

Query: 204  RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            R+   +R        FSP+ Q +A         L+V L D    +  +       ++ A 
Sbjct: 994  RHTLSARHARETPLAFSPDSQVIASYVR-----LKVDLWDVATGKGIQSF-EVHYVVSAM 1047

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +FS +GK  +++ +  E  DI ++    +    L          +++P    +   SD  
Sbjct: 1048 QFSPDGKVLVLATRTVELWDIATM----SCIRTLDGHTECVRCLAFTPCRKILASASD-- 1101

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQ 382
                + + +   S  K ++        +  +SP G+++A +   G    I ++    G  
Sbjct: 1102 -DMTVKLWEFETSSCK-LTMRLPGYPKNITFSPDGNILAASLADGS---IHILDTATGDT 1156

Query: 383  ERLLVEDSNLQAPTWSPSGRSLI 405
             R L  D    A ++   G ++ 
Sbjct: 1157 IRTLGGDIPCVAASFLVDGETIA 1179



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 59/162 (36%), Gaps = 10/162 (6%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALIS 275
             FSP++ +V  + Y  E +  +  +          +  F +     +  FS +G+     
Sbjct: 919  AFSPSKSQV-KSRYWKERLPFIRTVQGGRGTWDPCLQTFTADNKLGSILFSPDGRFLASV 977

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +   ++ ++  ++ +     L+         ++SPDS  I   S    K  L+ + +  
Sbjct: 978  SEWCGSVLLW--NVTTGTRHTLSARHARETPLAFSPDSQVIA--SYVRLKVDLWDVATGK 1033

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              Q   S +         +SP G ++     + E + I  M 
Sbjct: 1034 GIQ---SFEVHYVVSAMQFSPDGKVLVLATRTVELWDIATMS 1072



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 98/306 (32%), Gaps = 49/306 (16%)

Query: 153  KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM------DRDGANIR-- 204
            +    +SD + ++I     D  S  + V E      ++ S          DR G NI   
Sbjct: 796  RSIQALSDTLKRNIYSITPDKESTDVIVPEKDPLASVRYSCEFWVDHLCEDRGGQNIDDE 855

Query: 205  -----------YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
                       +   S   I   P   P+ +K+   + D E      L   R        
Sbjct: 856  RVFSFLEEHFLHWLESLSLIQKLPTAVPSIKKLLINSKDAERFALRNLQVMRQVP----- 910

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYS 310
               ++   A  FS +  +      K+    I +V       +    T   +    S  +S
Sbjct: 911  --LQTYGSALAFSPSKSQVKSRYWKERLPFIRTVQGGRGTWDPCLQTFTADNKLGSILFS 968

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSGE 369
            PD   +   S+  G   L+ +    +  +     + A      +SP   +IA + +   +
Sbjct: 969  PDGRFLASVSEWCGSVLLWNV---TTGTRHTLSARHARETPLAFSPDSQVIASYVRLKVD 1025

Query: 370  KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-------D 422
             + +      G   +       + A  +SP G+ L+ + +       +L+ I        
Sbjct: 1026 LWDVAT----GKGIQSFEVHYVVSAMQFSPDGKVLVLATR-----TVELWDIATMSCIRT 1076

Query: 423  LNGRNE 428
            L+G  E
Sbjct: 1077 LDGHTE 1082


>gi|226226346|ref|YP_002760452.1| hypothetical protein GAU_0940 [Gemmatimonas aurantiaca T-27]
 gi|226089537|dbj|BAH37982.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 992

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 83/225 (36%), Gaps = 33/225 (14%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PR+      + ++     ++  +Y+   R    P+R+    S+ +       G   + + 
Sbjct: 307 PRW-LTTDSLVWSANTGYEVSGLYMAPARRGAQPERMAWRNSLDVNV---PQGGDVVFAQ 362

Query: 277 QKDEAM-----DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                      D+Y  D  +    RLT+   +     + PD         R+G      +
Sbjct: 363 SDRRDPYTIRSDLYRRDRATGEEVRLTDGARL-----FMPDVR-------RDGAVIAVQV 410

Query: 332 QSNGSDQKRISQDKEAS----------YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +N S   R+S++ E +          + +P WSP G  IA  +         V+     
Sbjct: 411 GANASQLVRVSREGEVTPFTAENHGERWAEPRWSPDGAFIAAIQLLTNGEQRVVVLDSTG 470

Query: 382 QERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             R+ V    +  ++P+++P GR L++S  + G    +   +  +
Sbjct: 471 ALRVAVAGMRAVFESPSFTPDGRRLVWSSDRSGRMQIETAPLRTD 515



 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 75/237 (31%), Gaps = 23/237 (9%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G   + L  + R+G    +   +  +   EPR+SP+   +A          RV ++D+  
Sbjct: 411 GANASQLVRVSREGEVTPFTAENHGERWAEPRWSPDGAFIAAIQLLTNGEQRVVVLDS-T 469

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------------NAT 294
                 +   R++  +P F+ +G+R + S  +   M I +  L++               
Sbjct: 470 GALRVAVAGMRAVFESPSFTPDGRRLVWSSDRSGRMQIETAPLRTDVIDTLAWRDERAHV 529

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            + +         S SPD  Q+     R     + +   + +                 W
Sbjct: 530 TQASQVSTAVYEPSVSPDGRQVAALLFRADGNHVAIAALDTTGP----------MARSQW 579

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            P+ + +A    S     +          R LV    L        GR  + +    
Sbjct: 580 YPRRNTVAIPSVSDSAQLVSAPSSAYRAWRQLVPRYWLPQVGEGRDGRMTVGASTSG 636



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 73/215 (33%), Gaps = 16/215 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S+      I++ L   DR       LT      LF P    +   +A       +  ++ 
Sbjct: 363 SDRRDPYTIRSDLYRRDRATGEEVRLTDG--ARLFMPDVRRDGAVIA--VQVGANASQLV 418

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-ISVQKDEAMDIYSVDLQSNATERLTN 299
            +    +  P    N       PR+S +G     I +  +    +  +D        +  
Sbjct: 419 RVSREGEVTPFTAENHGERWAEPRWSPDGAFIAAIQLLTNGEQRVVVLDSTGALRVAVAG 478

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY---------- 349
              +  S S++PD  ++V+ SDR G+ Q+            ++   E ++          
Sbjct: 479 MRAVFESPSFTPDGRRLVWSSDRSGRMQIETAPLRTDVIDTLAWRDERAHVTQASQVSTA 538

Query: 350 -FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            ++P  SP G  +A   F  +   + +   D +  
Sbjct: 539 VYEPSVSPDGRQVAALLFRADGNHVAIAALDTTGP 573



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 87/297 (29%), Gaps = 30/297 (10%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVV----SGIIKNSLCVMD-RDGANIRYL 206
           R       D  +  ++ E    +S     ++S+V    +G   + L +   R GA    +
Sbjct: 283 RSAPSRAGDSAWTEVSTEGWHASSPRWLTTDSLVWSANTGYEVSGLYMAPARRGAQPERM 342

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRV---YLMDTRIDRAPKRIGNFRSMILAP 263
                  +  P+       V +A  D  D   +        R      R+ +   +   P
Sbjct: 343 AWRNSLDVNVPQ----GGDVVFAQSDRRDPYTIRSDLYRRDRATGEEVRLTDGARL-FMP 397

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
               +G  A+I+VQ            +       T            +SPD + I     
Sbjct: 398 DVRRDG--AVIAVQVGANASQLVRVSREGEVTPFTAENHGERWAEPRWSPDGAFIAAIQL 455

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               EQ  V+  +    +       A +  P ++P G  + ++     +  I        
Sbjct: 456 LTNGEQRVVVLDSTGALRVAVAGMRAVFESPSFTPDGRRLVWSSDRSGRMQIETAPLRTD 515

Query: 382 QERLLV-------------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               L                + +  P+ SP GR +     +       + ++D  G
Sbjct: 516 VIDTLAWRDERAHVTQASQVSTAVYEPSVSPDGRQVAALLFRADGNHVAIAALDTTG 572


>gi|21107351|gb|AAM36076.1| alanyl dipeptidyl peptidase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 730

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 10/114 (8%)

Query: 260 ILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYS 310
           + +P  + +G   L       +     A  ++  +L++      +RLT   +   S + S
Sbjct: 60  VSSPTLTPDGSSVLFAKRQAKTANGKPATSLWVRNLRTRDLSPPKRLTPEGWNVNSPALS 119

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           PD   + F S + G +QLY     G   ++++            SP G  IAF+
Sbjct: 120 PDGKTVYFLSSKSGSQQLYAQPMAGGTPQQLT-AFAVDVDSYKLSPGGKRIAFS 172



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 51/332 (15%), Positives = 100/332 (30%), Gaps = 66/332 (19%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R      S  ++Q    + G    ++     +  SG+I + L V   D  N
Sbjct: 159 SYKLSPGGKRIA---FSAGVFQDCGSDLGCTKKKLGERKNNKASGVIYDQLFVRHWDTWN 215

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSM 259
                              + ++      +        ++         A          
Sbjct: 216 -------------------DGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGG 256

Query: 260 ILAPRFSSNGKRALISVQKDE-------------------------AMDIYSVDLQSNA- 293
                +S +G   + SV+  +                           D+Y +D    + 
Sbjct: 257 NDDYTWSPDGSSVVASVRIPQPHGPEAGKNAKASGKPTGNDEPWQTNFDLYRLDATGKSA 316

Query: 294 TERLTN-TLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQD 344
              LT      +    +S D   +         FE+DR G   L  M       + I+  
Sbjct: 317 PVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFG---LMAMDVASGKTREIAPK 373

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S  + V S  G  +  +     +  +  +     +   LV + ++ APT +  G +L
Sbjct: 374 WDRSAGEIVLSDDGSSLYTSADDLGEHPLFKIDIASGEAAKLVGEGSVHAPTLA--GNTL 431

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            F+R     +G +++  D  G+    I+  A 
Sbjct: 432 AFTRS-SLKSGDQVFVSDTQGQGLRAISQSAG 462



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 81/274 (29%), Gaps = 51/274 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  +P+   V +A    +         L V  + TR    PKR+      + +P  S
Sbjct: 60  VSSPTLTPDGSSVLFAKRQAKTANGKPATSLWVRNLRTRDLSPPKRLTPEGWNVNSPALS 119

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y+  +     ++LT       S   SP   +I F +   G  
Sbjct: 120 PDGKTVYFLSSKSGSQQLYAQPMAGGTPQQLTAFAVDVDSYKLSPGGKRIAFSA---GVF 176

Query: 327 QLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           Q                  +    +  D+        W+       F        A  V+
Sbjct: 177 QDCGSDLGCTKKKLGERKNNKASGVIYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVV 236

Query: 377 KKDGSQERLLVED-----SNLQAPTWSPSGRSLIFS-----------------------R 408
                   L  +            TWSP G S++ S                        
Sbjct: 237 GASAISATLAGDAPSKPFGGNDDYTWSPDGSSVVASVRIPQPHGPEAGKNAKASGKPTGN 296

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +   T   LY +D  G++  +  T   A++P W
Sbjct: 297 DEPWQTNFDLYRLDATGKSAPVNLT---AANPAW 327



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 87/312 (27%), Gaps = 69/312 (22%)

Query: 183 SVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +G    SL V +   RD +  + LTP    +   P  SP+ + V + +   +   + 
Sbjct: 80  KTANGKPATSLWVRNLRTRDLSPPKRLTPEGWNVN-SPALSPDGKTVYFLS--SKSGSQQ 136

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                     P+++  F   + + + S  GKR   S            DL     ++L  
Sbjct: 137 LYAQPMAGGTPQQLTAFAVDVDSYKLSPGGKRIAFSA---GVFQDCGSDL-GCTKKKLGE 192

Query: 300 TLFINISA------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE- 346
                 S             +++      +F ++             G+     +   + 
Sbjct: 193 RKNNKASGVIYDQLFVRHWDTWNDGRRNTLFVAE---LPAAGAKAVVGASAISATLAGDA 249

Query: 347 -----ASYFDPVWSPQGDLIAFTKFSG-------------------------EKFAIGVM 376
                    D  WSP G  +  +                               F +  +
Sbjct: 250 PSKPFGGNDDYTWSPDGSSVVASVRIPQPHGPEAGKNAKASGKPTGNDEPWQTNFDLYRL 309

Query: 377 KKDG-SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETL 430
              G S    L     +    P +S  G++L +   K     +    L ++D+       
Sbjct: 310 DATGKSAPVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVASGKTRE 369

Query: 431 INTPAYASDPQW 442
           I        P+W
Sbjct: 370 IA-------PKW 374


>gi|113477866|ref|YP_723927.1| WD-40 repeat-containing serine/threonine protein kinase
           [Trichodesmium erythraeum IMS101]
 gi|110168914|gb|ABG53454.1| serine/threonine protein kinase with WD40 repeats [Trichodesmium
           erythraeum IMS101]
          Length = 698

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 77/195 (39%), Gaps = 13/195 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN + +   + D      + + D +  +  K I      +     S +G+  + SV 
Sbjct: 466 AISPNDEILVSGSTDK----TIKIWDLKNSKLLKDILGHNGQLNTVAISPDGQTLV-SVG 520

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ M ++++   S    RL +      + ++S D   + F    +G  +L+    +   
Sbjct: 521 SDKLMKLWNIQTGSRILTRLPDKESEVNALAFSRDGETL-FTGSSDGTIRLW--DPSTLT 577

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAP 395
           +++  Q    +      SP   ++A     G    I +   +  +E+ +++     ++A 
Sbjct: 578 RRQTLQGHTQAVNAIAISPDNQILASGSNDGT---IKLWDFNTRKEKTVIKANVGKVKAL 634

Query: 396 TWSPSGRSLIFSRKK 410
            +SP  +++  S  K
Sbjct: 635 VFSPDSQTIACSGDK 649



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 54/171 (31%), Gaps = 13/171 (7%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           + G+ I    P ++  +    FS + + +   + D      + L D       + +    
Sbjct: 531 QTGSRILTRLPDKESEVNALAFSRDGETLFTGSSDG----TIRLWDPSTLTRRQTLQGHT 586

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQI 316
             + A   S +  + L S   D  + ++  D  +   + +       + A  +SPDS  I
Sbjct: 587 QAVNAIAISPD-NQILASGSNDGTIKLW--DFNTRKEKTVIKANVGKVKALVFSPDSQTI 643

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
               D     ++ +      ++ +              +P G  +      
Sbjct: 644 ACSGD-----KITIWNLITKEKIQTFFGHSQQISSLAITPDGKTLISGSLD 689



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 47/138 (34%), Gaps = 14/138 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ + D      R       Q +     SP+ Q +A  + D      + L D  
Sbjct: 561 TGSSDGTIRLWDPSTLTRRQTLQGHTQAVNAIAISPDNQILASGSNDG----TIKLWDFN 616

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS---VDLQSNATERLTNTLF 302
             +    I      + A  FS + +    S  K    ++ +   +      +++++    
Sbjct: 617 TRKEKTVIKANVGKVKALVFSPDSQTIACSGDKITIWNLITKEKIQTFFGHSQQIS---- 672

Query: 303 INISASYSPDSSQIVFES 320
              S + +PD   ++  S
Sbjct: 673 ---SLAITPDGKTLISGS 687


>gi|116670169|ref|YP_831102.1| peptidase S41 [Arthrobacter sp. FB24]
 gi|116610278|gb|ABK03002.1| peptidase S41 [Arthrobacter sp. FB24]
          Length = 1183

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 68/193 (35%), Gaps = 23/193 (11%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G       + D    ++   L      R+++      +  ++PD  ++V+   +    ++
Sbjct: 14  GDLVTFVAEDD----VWIAPLDGGRAWRVSSLQLPARNPRFTPDGKRLVWTVVQGTAPEV 69

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI---AFTKFSGEKFAIGVMKKDGSQERL 385
              + +G   ++++    AS     ++  GD++   AF +          +  +G     
Sbjct: 70  VTAEVDGGGYRQLTYFGHASTRVKGFTAAGDVLVTSAFRQAESRHTHAYSVPLEGGWSEE 129

Query: 386 LVEDSNLQAPTWSP---SGRSLI-----------FSRKKDGDTGSKLYSIDLNGRNETLI 431
           L     +++  + P     R ++           + R + G  G      D NG  E L+
Sbjct: 130 LPFGP-VESVAFGPEIGDERPVVVASVLSREPAWWKRYRGGTAGKLWIDADGNGEFERLV 188

Query: 432 N-TPAYASDPQWV 443
                  +DP WV
Sbjct: 189 PELDGNLADPMWV 201



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 92/269 (34%), Gaps = 31/269 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +   DG    +   S       PRF+P+ +++ +          V   +       +
Sbjct: 24  DVWIAPLDGGRA-WRVSSLQLPARNPRFTPDGKRLVWTVV-QGTAPEVVTAEVDGGGYRQ 81

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTNTLFINISAS 308
                 +      F++ G   + S  +         YSV L+   +E L      ++  +
Sbjct: 82  LTYFGHASTRVKGFTAAGDVLVTSAFRQAESRHTHAYSVPLEGGWSEELPFGPVESV--A 139

Query: 309 YSP---DSSQIVFES-----------DREGKEQLYVMQSNG-SDQKRISQDKEASYFDPV 353
           + P   D   +V  S            R G      + ++G  + +R+  + + +  DP+
Sbjct: 140 FGPEIGDERPVVVASVLSREPAWWKRYRGGTAGKLWIDADGNGEFERLVPELDGNLADPM 199

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           W   G  IAF         +  +  +G+  R   +  +      +  G+ ++F      +
Sbjct: 200 WV-DGR-IAFLSDHEGYGNLYSVLPNGTGLRRHTDHEDFYVRHAATDGKRVVF------E 251

Query: 414 TGSKLYSI-DLNGRNETLINTPAYASDPQ 441
           +  +L+ + DL      L  +   AS  +
Sbjct: 252 SAGELWVLPDLGSEAVKLDISLGSASQGR 280



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 50/133 (37%), Gaps = 13/133 (9%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T    I      SPD   +           +Y+  +     K ++   E +     WSP 
Sbjct: 465 TRASAIEA----SPDGRTLAIG---TAFGDVYLADTRSGTIKLVTSIGEGTIDGLCWSPD 517

Query: 358 GDLIAF---TKFSGEKFAIGVMKKDGSQERLL-VEDSNLQ--APTWSPSGRSLIFSRKKD 411
              + +       G +  + ++  D  + R++ V D   +  +P+++P G+ L F   + 
Sbjct: 518 SAWLGWSEPVTSFGSRSRLRIVNVDDPEFRIVDVTDGRFRDASPSFTPDGKFLAFLSNRS 577

Query: 412 GDTGSKLYSIDLN 424
            D     +S DL+
Sbjct: 578 FDPVYDGHSFDLS 590



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 9/109 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---V 276
           SP+ + +A  T        VYL DTR              I    +S +      S    
Sbjct: 473 SPDGRTLAIGTA----FGDVYLADTRSGTIKLVTSIGEGTIDGLCWSPDSAWLGWSEPVT 528

Query: 277 QKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDRE 323
                  +  V++       +  T+  F + S S++PD   + F S+R 
Sbjct: 529 SFGSRSRLRIVNVDDPEFRIVDVTDGRFRDASPSFTPDGKFLAFLSNRS 577



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 43/122 (35%), Gaps = 19/122 (15%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPT 396
           +RI   K         SP G  +A     G+   + +        +L+    +  +    
Sbjct: 457 RRIDFPKPTRASAIEASPDGRTLAIGTAFGD---VYLADTRSGTIKLVTSIGEGTIDGLC 513

Query: 397 WSPSGRSLIFS---RKKDGDTGSKLYSID---------LNGRNETLINTPAYASDPQWVG 444
           WSP    L +S         +  ++ ++D          +GR      +P++  D +++ 
Sbjct: 514 WSPDSAWLGWSEPVTSFGSRSRLRIVNVDDPEFRIVDVTDGRF--RDASPSFTPDGKFLA 571

Query: 445 FM 446
           F+
Sbjct: 572 FL 573



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY----ATYDDEDILRVYLM 242
           G     + + D     I+ +T   +  +    +SP+   + +     ++     LR+  +
Sbjct: 482 GTAFGDVYLADTRSGTIKLVTSIGEGTIDGLCWSPDSAWLGWSEPVTSFGSRSRLRIVNV 541

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQ 290
           D    R    + + R    +P F+ +GK       +  D   D +S DL 
Sbjct: 542 DDPEFRIV-DVTDGRFRDASPSFTPDGKFLAFLSNRSFDPVYDGHSFDLS 590


>gi|256423273|ref|YP_003123926.1| hypothetical protein Cpin_4276 [Chitinophaga pinensis DSM 2588]
 gi|256038181|gb|ACU61725.1| hypothetical protein Cpin_4276 [Chitinophaga pinensis DSM 2588]
          Length = 316

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 71/215 (33%), Gaps = 27/215 (12%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRALISVQKDEAMDI 284
           + D  D     L      +    +  F+     + + +P  S + K  L+    D+   +
Sbjct: 86  SRDHPDDYDAELYTITNVKDNTIVSQFKKFSGYANLTSPLLSYDKKLILVPPTFDDG--V 143

Query: 285 YSVDLQSNATERLTNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
             +DLQ      L +     ++    + PD++  +F    +G   +Y      ++   + 
Sbjct: 144 MILDLQGKILFNLVSYQGKKLDGRVIWMPDNT-FLFS---QGNS-IYRTNKEFTNATLVK 198

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSG 401
                S+     SP G  +A          + +M  DGS    + E +  +  P +SP  
Sbjct: 199 TFNFDSWGHFSISPDGTKLALR----GGNHVWMMNIDGSNLTQVTESNWTEVWPVFSPDS 254

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           + L+                   GR   +   PA 
Sbjct: 255 KYLLIGYDYTPTNQW--------GRWWRMAIIPAD 281



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/98 (11%), Positives = 32/98 (32%), Gaps = 10/98 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+       T+       +Y  +     A                S +G +  +    
Sbjct: 170 WMPD------NTFLFSQGNSIYRTNKEFTNATLVKTFNFDSWGHFSISPDGTKLAL---- 219

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                ++ +++  +   ++T + +  +   +SPDS  +
Sbjct: 220 RGGNHVWMMNIDGSNLTQVTESNWTEVWPVFSPDSKYL 257


>gi|167625402|ref|YP_001675696.1| peptidase S9 prolyl oligopeptidase [Shewanella halifaxensis
           HAW-EB4]
 gi|167355424|gb|ABZ78037.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella halifaxensis HAW-EB4]
          Length = 680

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 53/279 (18%), Positives = 109/279 (39%), Gaps = 34/279 (12%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-IL 237
                V        L + D++G+  R LT  +   + EP FSP+   +A+ +  DED   
Sbjct: 53  VTQYDVPEDKGSTQLWLFDKEGSTQRALTA-KGLRVSEPTFSPDGNTLAFISKRDEDEAG 111

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATE 295
           +VYL+        +++ +    +   ++   GK      +    +  D  +  L+++   
Sbjct: 112 QVYLLPMNGPGEAQKLTDVPGGVYGMKW--VGKHIYFISRIFPGKNWDEMTTQLKADKDN 169

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +++   +  +   YS     I    D + +  ++ + + G + + I+Q  +        S
Sbjct: 170 KVSAHQWNELP--YSSFDHWI----DEDRQAHVFRIPATGGEIEAITQPLKQQLPRSSQS 223

Query: 356 P-------QGDLIAFT----------KFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPT 396
                       IAFT          +    K  I + K   ++   L  D+      P 
Sbjct: 224 ASSYDIDLNEQWIAFTANGWDASLKSREVDPKIDIFLAKIGSNKAENLTPDNEAPNSNPQ 283

Query: 397 WSPSGRSLIFSRK-KDGDTG--SKLYSIDLNGRNETLIN 432
           +SP+G++L F+++   G     S+L  +D+  R   +IN
Sbjct: 284 FSPNGKTLAFTQQLIHGFYADTSRLVLMDMKKRQPKVIN 322



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 72/211 (34%), Gaps = 34/211 (16%)

Query: 260 ILAPRFSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +P  S +G R +  V +        +  ++  D + +    LT         ++SPD 
Sbjct: 37  IGSPIISPSGDRIIAPVTQYDVPEDKGSTQLWLFDKEGSTQRALTAKGLRVSEPTFSPDG 96

Query: 314 SQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGE 369
           + + F S R+  E  Q+Y++  NG  + +   D     +   W   G  I F    F G+
Sbjct: 97  NTLAFISKRDEDEAGQVYLLPMNGPGEAQKLTDVPGGVYGMKWV--GKHIYFISRIFPGK 154

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            +     +    ++  +      + P +S     +      D D  + ++ I   G    
Sbjct: 155 NWDEMTTQLKADKDNKVSAHQWNELP-YSSFDHWI------DEDRQAHVFRIPATGGEIE 207

Query: 430 LINTPAYASDP---------------QWVGF 445
            I  P     P               QW+ F
Sbjct: 208 AITQPLKQQLPRSSQSASSYDIDLNEQWIAF 238



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 9/163 (5%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFE-----SDREGKEQL 328
           S + D  +DI+   + SN  E LT +    N +  +SP+   + F             +L
Sbjct: 249 SREVDPKIDIFLAKIGSNKAENLTPDNEAPNSNPQFSPNGKTLAFTQQLIHGFYADTSRL 308

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +M       K I+   + S     W+                 I  +     + + + +
Sbjct: 309 VLMDMKKRQPKVINDTWDRSVSRFGWTKDSKGFYAAIDDAATSRIYHIDAKNGKVKAITK 368

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETL 430
            +N   P  +  G   I +        ++L +I+  NG+   L
Sbjct: 369 QTNFGKPVMAKDGT--IVTTNDSFLYPARLVTINPRNGKTTRL 409


>gi|298377700|ref|ZP_06987651.1| cytochrome c binding protein [Bacteroides sp. 3_1_19]
 gi|298265403|gb|EFI07065.1| cytochrome c binding protein [Bacteroides sp. 3_1_19]
          Length = 490

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 29/159 (18%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDIL-------------RVYLMDTRIDRAPKR 252
           LT  +D++   P FSP+   + Y +   + +                +       R  + 
Sbjct: 279 LTSRKDELETFPTFSPDGNWIYYCSAPIQPLPDSIHNLKYSLCRISFHKDTKEWGRQIET 338

Query: 253 IGNFRSMILA---PRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLT--NT 300
           + + +    +   P+ S +GK  L +V             D++ ++LQ+   + L   N+
Sbjct: 339 VWDAQKHNGSACHPKISPDGKYLLFTVADYGTFPIWHQETDLHMMNLQTGKIDTLPAVNS 398

Query: 301 LFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNG 335
              +   S+S +S   VF S R+    GK     + S G
Sbjct: 399 DKSDTYHSWSSNSHWFVFASKRDDGLYGKPYFSYVDSTG 437



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 70/223 (31%), Gaps = 48/223 (21%)

Query: 265 FSSNGKRALISVQ----------------KDEAMDIYSVDLQSNAT--ERLTNTLF-INI 305
           F  +G+ A+ S                   D   D+   D +        LT+    +  
Sbjct: 229 FHPSGQFAVFSTNIIIPAFHSLGSKRLEVYDTTSDLVVADFRKKQLITSPLTSRKDELET 288

Query: 306 SASYSPDSSQIVFES-------DREGKEQLYVMQSN--------GSDQKRIS--QDKEAS 348
             ++SPD + I + S       D     +  + + +        G   + +   Q    S
Sbjct: 289 FPTFSPDGNWIYYCSAPIQPLPDSIHNLKYSLCRISFHKDTKEWGRQIETVWDAQKHNGS 348

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAP---TWS 398
              P  SP G  + FT      F I        +M     +   L   ++ ++    +WS
Sbjct: 349 ACHPKISPDGKYLLFTVADYGTFPIWHQETDLHMMNLQTGKIDTLPAVNSDKSDTYHSWS 408

Query: 399 PSGRSLIFSRKKDGDTGSKLY--SIDLNGRNETLINTPAYASD 439
            +    +F+ K+D     K Y   +D  G+       P    +
Sbjct: 409 SNSHWFVFASKRDDGLYGKPYFSYVDSTGKAYKPFVLPQEDPE 451


>gi|262384839|ref|ZP_06077971.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262293555|gb|EEY81491.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 484

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 29/159 (18%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDIL-------------RVYLMDTRIDRAPKR 252
           LT  +D++   P FSP+   + Y +   + +                +       R  + 
Sbjct: 273 LTSRKDELETFPTFSPDGNWIYYCSAPIQPLPDSIHNLKYSLCRISFHKDTKEWGRQIET 332

Query: 253 IGNFRSMILA---PRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLT--NT 300
           + + +    +   P+ S +GK  L +V             D++ ++LQ+   + L   N+
Sbjct: 333 VWDAQKHNGSACHPKISPDGKYLLFTVADYGTFPIWHQETDLHMMNLQTGKIDTLPAVNS 392

Query: 301 LFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNG 335
              +   S+S +S   VF S R+    GK     + S G
Sbjct: 393 DKSDTYHSWSSNSHWFVFASKRDDGLYGKPYFSYVDSTG 431



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 70/223 (31%), Gaps = 48/223 (21%)

Query: 265 FSSNGKRALISVQ----------------KDEAMDIYSVDLQSNAT--ERLTNTLF-INI 305
           F  +G+ A+ S                   D   D+   D +        LT+    +  
Sbjct: 223 FHPSGQFAVFSTNIIIPAFHSLGSKRLEVYDTTSDLVVADFRKKQLITSPLTSRKDELET 282

Query: 306 SASYSPDSSQIVFES-------DREGKEQLYVMQSN--------GSDQKRIS--QDKEAS 348
             ++SPD + I + S       D     +  + + +        G   + +   Q    S
Sbjct: 283 FPTFSPDGNWIYYCSAPIQPLPDSIHNLKYSLCRISFHKDTKEWGRQIETVWDAQKHNGS 342

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAP---TWS 398
              P  SP G  + FT      F I        +M     +   L   ++ ++    +WS
Sbjct: 343 ACHPKISPDGKYLLFTVADYGTFPIWHQETDLHMMNLQTGKIDTLPAVNSDKSDTYHSWS 402

Query: 399 PSGRSLIFSRKKDGDTGSKLY--SIDLNGRNETLINTPAYASD 439
            +    +F+ K+D     K Y   +D  G+       P    +
Sbjct: 403 SNSHWFVFASKRDDGLYGKPYFSYVDSTGKAYKPFVLPQEDPE 445


>gi|300777976|ref|ZP_07087834.1| dipeptidyl peptidase IV [Chryseobacterium gleum ATCC 35910]
 gi|300503486|gb|EFK34626.1| dipeptidyl peptidase IV [Chryseobacterium gleum ATCC 35910]
          Length = 723

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 90/295 (30%), Gaps = 82/295 (27%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRA-------PKRIGNFRSMILAPRFSSNGKR 271
           ++P+    AY ++  + +  V ++    D+             +    + + + S +GK 
Sbjct: 27  WTPDGN--AYYSFTKKGVEIVDVLHPGKDQTLLSSNELIPAGSSEALKVQSFQVSPDGKS 84

Query: 272 ALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESD 321
            L+        + +   D +  D  +    +L     +  S    A YSPD  ++ + S 
Sbjct: 85  LLLFANTKKVWRDNTRGDYWIFDKNTKKLTQL--GKGLPASSLMFAKYSPDGKKVAYVS- 141

Query: 322 REGKEQLYVMQSNGSDQKRISQDK----------------EASYFDPVWSPQGDLIAFTK 365
              K  +Y+   + + Q +I+ D                   +     WSP G+ IA+ K
Sbjct: 142 ---KHNIYIEDLSNNQQTKITSDGTDGMINGTFDWVYEEEFGTQDGFRWSPDGNKIAYWK 198

Query: 366 F-------------------------------SGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                                           +    +I          +   + S  + 
Sbjct: 199 LDARGTKNFLMINNTDSLYSFTIPVEYPKAGENPSGCSIWFYDLASGSTKK-ADISGDEV 257

Query: 395 PTWSP------SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             + P        +S+I  +       SK+   D +  N   I T   A    W+
Sbjct: 258 QHYIPRMEWVLDSKSVILQQLNRKQNQSKIIVADADSGNSKTIYTETDA---AWI 309



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 42/338 (12%), Positives = 104/338 (30%), Gaps = 77/338 (22%)

Query: 165 SITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPS-RDQILFEPRFSPN 222
                  D  S +LF  ++ V     +    + D++   +  L        L   ++SP+
Sbjct: 74  QSFQVSPDGKSLLLFANTKKVWRDNTRGDYWIFDKNTKKLTQLGKGLPASSLMFAKYSPD 133

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR----------------SMILAPRFS 266
            +KVAY +  +     +Y+ D   ++  K   +                        R+S
Sbjct: 134 GKKVAYVSKHN-----IYIEDLSNNQQTKITSDGTDGMINGTFDWVYEEEFGTQDGFRWS 188

Query: 267 SNGKRALI-------------------------------SVQKDEAMDIYSVDLQSNATE 295
            +G +                                  + +      I+  DL S +T+
Sbjct: 189 PDGNKIAYWKLDARGTKNFLMINNTDSLYSFTIPVEYPKAGENPSGCSIWFYDLASGSTK 248

Query: 296 RLTNTLFINISA-----SYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +  +     +        +  DS  ++ +  + ++ + ++ V  ++  + K I  + +A+
Sbjct: 249 K-ADISGDEVQHYIPRMEWVLDSKSVILQQLNRKQNQSKIIVADADSGNSKTIYTETDAA 307

Query: 349 YFDP------------VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           + D              W   G    +         I  +  +G +  +  +  ++  P 
Sbjct: 308 WIDIKSRWNDNDPSGWDWIDNGKEFLWLSEKDGWRHIYKIDMNGKETLITKDAFDVIKPE 367

Query: 397 WSPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +      + + F    +  T   LY + + G     + 
Sbjct: 368 FF-DIQNKQIYFLASPNNATQKYLYKVSMKGGKAQKVT 404



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 63/176 (35%), Gaps = 5/176 (2%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
            + ++  S+  IL +     NQ K+  A  D  +   +Y          K   N      
Sbjct: 263 RMEWVLDSKSVILQQLNRKQNQSKIIVADADSGNSKTIYTETDAAWIDIKSRWNDNDPSG 322

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP-DSSQIVFES 320
              +  NGK  L   +KD    IY +D+       +T   F  I   +    + QI F +
Sbjct: 323 W-DWIDNGKEFLWLSEKDGWRHIYKIDMNGK-ETLITKDAFDVIKPEFFDIQNKQIYFLA 380

Query: 321 DREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                 Q  LY +   G   ++++ +      +   SP G +  FT  +    +IG
Sbjct: 381 SPNNATQKYLYKVSMKGGKAQKVTPETYTGSNEYTISPNGKIAMFTNDNVNTISIG 436


>gi|150006738|ref|YP_001301481.1| putative cytochrome c binding protein [Parabacteroides distasonis
           ATCC 8503]
 gi|149935162|gb|ABR41859.1| putative cytochrome c binding protein [Parabacteroides distasonis
           ATCC 8503]
          Length = 484

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 29/159 (18%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDIL-------------RVYLMDTRIDRAPKR 252
           LT  +D++   P FSP+   + Y +   + +                +       R  + 
Sbjct: 273 LTSRKDELETFPTFSPDGNWIYYCSAPIQPLPDSIHNLKYSLCRISFHKDTKEWGRQIET 332

Query: 253 IGNFRSMILA---PRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLT--NT 300
           + + +    +   P+ S +GK  L +V             D++ ++LQ+   + L   N+
Sbjct: 333 VWDAQKHNGSACHPKISPDGKYLLFTVADYGTFPIWHRETDLHMMNLQTGKIDTLPAVNS 392

Query: 301 LFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNG 335
              +   S+S +S   VF S R+    GK     + S G
Sbjct: 393 DKSDTYHSWSSNSHWFVFASKRDDGLYGKPYFSYVDSTG 431



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 70/223 (31%), Gaps = 48/223 (21%)

Query: 265 FSSNGKRALISVQ----------------KDEAMDIYSVDLQSNAT--ERLTNTLF-INI 305
           F  +G+ A+ S                   D   D+   D +        LT+    +  
Sbjct: 223 FHPSGQFAVFSTNIIIPAFHSLGSKRLEVYDTTSDLVVADFRKKQLITSPLTSRKDELET 282

Query: 306 SASYSPDSSQIVFES-------DREGKEQLYVMQSN--------GSDQKRIS--QDKEAS 348
             ++SPD + I + S       D     +  + + +        G   + +   Q    S
Sbjct: 283 FPTFSPDGNWIYYCSAPIQPLPDSIHNLKYSLCRISFHKDTKEWGRQIETVWDAQKHNGS 342

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAP---TWS 398
              P  SP G  + FT      F I        +M     +   L   ++ ++    +WS
Sbjct: 343 ACHPKISPDGKYLLFTVADYGTFPIWHRETDLHMMNLQTGKIDTLPAVNSDKSDTYHSWS 402

Query: 399 PSGRSLIFSRKKDGDTGSKLY--SIDLNGRNETLINTPAYASD 439
            +    +F+ K+D     K Y   +D  G+       P    +
Sbjct: 403 SNSHWFVFASKRDDGLYGKPYFSYVDSTGKAYKPFVLPQEDPE 445


>gi|119484388|ref|ZP_01619005.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
 gi|119457862|gb|EAW38985.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
          Length = 1394

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 82/227 (36%), Gaps = 18/227 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +     ++ +   DG  +       +  +    FS N   +A A+ D    ++++  D  
Sbjct: 969  TASRDKTVKLWKADGT-LITTLRGHEDRVINVSFSQNGNLLATASVD--KTVKLWKAD-- 1023

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                   +      +L   FS   +  L +   D+ + ++  D        L        
Sbjct: 1024 -GTLITTLTEHEDDVLDVAFSPK-EDLLATASVDKTVKLWKSD--GTLITTLRGHEEDVN 1079

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S ++SPD   I         + + + +++G+  +   ++ +    D  +SP G LIA   
Sbjct: 1080 SVAFSPDGKLIA-----SADKTVKLWKADGTLVETFDEEHKGMVKDVAFSPDGKLIATAS 1134

Query: 366  FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
                   + + K DG+        + ++    +SP G+ L  + + +
Sbjct: 1135 VDDT---VKLWKVDGTLVSTFKGHEGDVWGVAFSPDGKLLASASRDN 1178



 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 55/308 (17%), Positives = 106/308 (34%), Gaps = 46/308 (14%)

Query: 130  LWDVK---DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-V 185
            + DV        I       +   W        D   +++ G K D  S      E +  
Sbjct: 873  VLDVAFSPKGDMIASASSDKTVKLW-----KPDDTFIKTLKGHKEDVLSVAFSPKEDLLA 927

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +    N++ +   DG  +       +  +    FSP    +A A+ D    ++++  D  
Sbjct: 928  TASADNTVKLWKSDGT-LVNTLEGHENWVRGVTFSPKGDLLATASRD--KTVKLWKAD-- 982

Query: 246  IDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                   I   R     ++   FS NG     +   D+ + ++  D        LT    
Sbjct: 983  ----GTLITTLRGHEDRVINVSFSQNGNLLA-TASVDKTVKLWKAD--GTLITTLTEHED 1035

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              +  ++SP    +   S     + + + +S+G+    + +  E       +SP G LIA
Sbjct: 1036 DVLDVAFSPKEDLLATASV---DKTVKLWKSDGTLITTL-RGHEEDVNSVAFSPDGKLIA 1091

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGS 416
                +     + + K DG+    LVE  + +         +SP G+ +  +   D     
Sbjct: 1092 SADKT-----VKLWKADGT----LVETFDEEHKGMVKDVAFSPDGKLIATASVDD---TV 1139

Query: 417  KLYSIDLN 424
            KL+ +D  
Sbjct: 1140 KLWKVDGT 1147



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 87/231 (37%), Gaps = 19/231 (8%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +++  G          ++ +F   FSP    +A A+ D    ++++  D       K + 
Sbjct: 608 IVNWSGEKQINSLEGHEKDIFGIAFSPKGDLLATASGD--KTVKLWKPD---GTFVKTLE 662

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             +  +L   FS  G     +   D+ + ++  D        L +        ++ P  +
Sbjct: 663 GHKDFVLNVAFSPKGDLLA-TASSDKTVKLWKPD--GTLITTLKDHEGGVRGVAFHPLGN 719

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            I   S     + + + + +G+    ++ + E       +SP+GDL+A        + + 
Sbjct: 720 LIATASH---DKTVKLWKPDGTLITTLT-EHEGDVLSVAFSPKGDLLATASAD---YTVK 772

Query: 375 VMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           + K DG+    L    N  +  T+SP G  L  +     D+  KL+  D  
Sbjct: 773 LWKSDGTLITTLKGHENWVRGVTFSPKGDLLATASY---DSTVKLWKPDGT 820



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 46/239 (19%), Positives = 79/239 (33%), Gaps = 18/239 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     ++ +   DG  I  LT     +L    FSP    +A A+ D      V L  + 
Sbjct: 723 TASHDKTVKLWKPDGTLITTLTEHEGDVLSV-AFSPKGDLLATASAD----YTVKLWKSD 777

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                   G   + +    FS  G     +   D  + ++  D        L        
Sbjct: 778 GTLITTLKG-HENWVRGVTFSPKGDLLA-TASYDSTVKLWKPD--GTLISTLKGHQSKVN 833

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++SP    +   S     +    +        RI +  E S  D  +SP+GD+IA + 
Sbjct: 834 SVAFSPKGDLLASAS----SDNTVKLWETDGTLIRILEGHEDSVLDVAFSPKGDMIA-SA 888

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            S +   +     D   + L     ++ +  +SP    L  +     D   KL+  D  
Sbjct: 889 SSDKTVKLWKPD-DTFIKTLKGHKEDVLSVAFSPKEDLLATAS---ADNTVKLWKSDGT 943



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 66/209 (31%), Gaps = 19/209 (9%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
            +S       +         + W    A   +   + +   D L V F          +  
Sbjct: 999  VSFSQNGNLLATASVDKTVKLWK---ADGTLITTLTEHEDDVLDVAFS----PKEDLLAT 1051

Query: 142  KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
                 +   W+      SD    +      +  + + F  +  +      ++ +   DG 
Sbjct: 1052 ASVDKTVKLWK------SDGTLITTLRGHEEDVNSVAFSPDGKLIASADKTVKLWKADGT 1105

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             +         ++ +  FSP+ + +A A+ D  D ++++ +D  +    K        + 
Sbjct: 1106 LVETFDEEHKGMVKDVAFSPDGKLIATASVD--DTVKLWKVDGTLVSTFK---GHEGDVW 1160

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               FS +GK    S  +D  + +   +  
Sbjct: 1161 GVAFSPDGKLLA-SASRDNTVKLRRFNRD 1188


>gi|315445202|ref|YP_004078081.1| WD40 repeat-containing protein [Mycobacterium sp. Spyr1]
 gi|315263505|gb|ADU00247.1| WD40 repeat-containing protein [Mycobacterium sp. Spyr1]
          Length = 1399

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 89/255 (34%), Gaps = 27/255 (10%)

Query: 190  KNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               + V+D D G  +R         + E  FSP+   +   + D    L+++  +     
Sbjct: 887  DRVIQVVDTDTGDPVREFPSGHQGYVSELAFSPDGALLLSGSED--GTLQMWDAEAGTAI 944

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINIS 306
             P+       M+    F  +G+R + S        +   D Q+       L   +    +
Sbjct: 945  GPRIET--GGMVADVAFRPDGRRFVSSGN-----SVILWDTQTRKPIGDPLQGHVNAVTT 997

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTK 365
             S+SPDS  +   S       + V  ++       +    E   +  V+SP G  IA   
Sbjct: 998  VSFSPDSQVLATGS---ADATVRVWDADTGAFLWNVMYGHEGRIWGLVYSPDGRHIASAS 1054

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              G    + +    GSQ  LL   + ++  ++SP G    F      D   +L+  D   
Sbjct: 1055 SDGT---VRIWNPLGSQP-LLGHTAAVRDLSYSPDGE---FMASAGEDGTVRLWDPD--- 1104

Query: 426  RNETLINTPAYASDP 440
                L+  P  A  P
Sbjct: 1105 -THQLLGRPLDAGVP 1118



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 72/222 (32%), Gaps = 18/222 (8%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           QQ VA                   D    +I   + ++    +S +G R   S   D  +
Sbjct: 748 QQMVAARALTSSPDDYALSTIVEQDNNTTKIIPAQGVMAGVSYSPDGSRLAASG-ADGYV 806

Query: 283 DIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            ++  D +S       + +   +    ++SPD   +V  +D +G  +++   +       
Sbjct: 807 RVW--DAESGQPVVDPIPDHQGV-SEIAFSPDGQALV-TADLDGVLRIF--DAGDFSVDH 860

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---W 397
                  +     ++  G   A     G    I V+  D           +    +   +
Sbjct: 861 EIDTGTENLSSIAFTSDGSRFATI---GNDRVIQVVDTDTGDPVREFPSGHQGYVSELAF 917

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           SP G +L+ S  +DG    +++  +        I T    +D
Sbjct: 918 SPDG-ALLLSGSEDGT--LQMWDAEAGTAIGPRIETGGMVAD 956



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 71/213 (33%), Gaps = 20/213 (9%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            VMD DG  +    P  + I   P +      +A  +   E+ + V  +      +   + 
Sbjct: 1185 VMDIDGQQVGEEVPDVEAITLSPAW-----NLAATSRMSENNVYVLPIGGDSQGSEVTLE 1239

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPD 312
               + +    F+ +G   L+S   D  +  +  +  +  +    L       +  ++SPD
Sbjct: 1240 GHTNRVGRLVFNPDG-SLLVSASDDTTVRRW--NPATGESVGGPLAGHTDEVLDLAFSPD 1296

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +++V     +   +L+ + + G                  + P G   A     G    
Sbjct: 1297 GTRLV-TGSADTTARLWDV-ATGRQIADPYVGHTEHVTSVAFDPDGGSFATGSRDGT--- 1351

Query: 373  IGVMKKDGSQE----RLLVEDSNLQAPTW-SPS 400
            + V     S E    +L    S+ Q   W SP 
Sbjct: 1352 VRVRSVTASPEMLCAKLTANMSHKQWDVWVSPD 1384



 Score = 43.5 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 100/344 (29%), Gaps = 42/344 (12%)

Query: 108  AQVLVTGRVIKE----GKDRLRVEFRLWDVKDRKQIIGKKF--------FSSPASWRKIA 155
               + T     +             R+WD      +    +               R IA
Sbjct: 992  VNAVTTVSFSPDSQVLATGSADATVRVWDADTGAFLWNVMYGHEGRIWGLVYSPDGRHIA 1051

Query: 156  HTISD---DIYQSITGEKGDFNSRILFVSESVVSGII------KNSLCVMDRDGANIRYL 206
               SD    I+  +  +    ++  +        G          ++ + D D       
Sbjct: 1052 SASSDGTVRIWNPLGSQPLLGHTAAVRDLSYSPDGEFMASAGEDGTVRLWDPDTH----Q 1107

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRF 265
               R      P ++ +  + +       D   V L +    +   R    R   I    F
Sbjct: 1108 LLGRPLDAGVPLYALDFSEDSSTLVAGGDGGTVVLWNMGSRQVAGRYETGRAGAIRTLEF 1167

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREG 324
               G+R  + +  D       +D+      E + +   I +S +++     +   S R  
Sbjct: 1168 EDKGERLSV-LDWDGVAS--VMDIDGQQVGEEVPDVEAITLSPAWN-----LAATS-RMS 1218

Query: 325  KEQLYVMQSNGSDQ-KRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            +  +YV+   G  Q   ++ +   +     V++P G L+                 +   
Sbjct: 1219 ENNVYVLPIGGDSQGSEVTLEGHTNRVGRLVFNPDGSLLVSASDDTTVRRWNPATGESVG 1278

Query: 383  ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              L      +    +SP G  L+       DT ++L+ +   GR
Sbjct: 1279 GPLAGHTDEVLDLAFSPDGTRLV---TGSADTTARLWDV-ATGR 1318


>gi|145224874|ref|YP_001135552.1| WD-40 repeat-containing protein [Mycobacterium gilvum PYR-GCK]
 gi|145217360|gb|ABP46764.1| WD-40 repeat-containing protein [Mycobacterium gilvum PYR-GCK]
          Length = 1399

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 51/255 (20%), Positives = 89/255 (34%), Gaps = 27/255 (10%)

Query: 190  KNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               + V+D D G  +R         + E  FSP+   +   + D    L+++  +     
Sbjct: 887  DRVIQVVDTDTGDPVREFPSGHQGYVSELAFSPDGALLLSGSED--GTLQMWDAEAGTAI 944

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINIS 306
             P+       M+    F  +G+R + S        +   D Q+       L   +    +
Sbjct: 945  GPRIET--GGMVADVAFRPDGRRFVSSGN-----SVILWDTQTRKPIGDPLQGHVNAVTT 997

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTK 365
             S+SPDS  +   S       + V  ++       +    E   +  V+SP G  IA   
Sbjct: 998  VSFSPDSQVLATGS---ADATVRVWDADTGAFLWNVMYGHEGRIWGLVYSPDGRHIASAS 1054

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              G    + +    GSQ  LL   + ++  ++SP G    F      D   +L+  D   
Sbjct: 1055 SDGT---VRIWNPLGSQP-LLGHTAAVRDLSYSPDGE---FMASAGEDGTVRLWDPD--- 1104

Query: 426  RNETLINTPAYASDP 440
                L+  P  A  P
Sbjct: 1105 -THQLLGRPLDAGVP 1118



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 72/222 (32%), Gaps = 18/222 (8%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           QQ VA                   D    +I   + ++    +S +G R   S   D  +
Sbjct: 748 QQMVAARALTSSPDDYALSTIVEQDNNTTKIIPAQGVMAGVSYSPDGSRLAASG-ADGYV 806

Query: 283 DIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            ++  D +S       + +   +    ++SPD   +V  +D +G  +++   +       
Sbjct: 807 RVW--DAESGQPVVDPIPDHQGV-SEIAFSPDGQALV-TADLDGVLRIF--DAGDFSVDH 860

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---W 397
                  +     ++  G   A     G    I V+  D           +    +   +
Sbjct: 861 EIDTGTENLSSIAFTSDGSRFATI---GNDRVIQVVDTDTGDPVREFPSGHQGYVSELAF 917

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           SP G +L+ S  +DG    +++  +        I T    +D
Sbjct: 918 SPDG-ALLLSGSEDGT--LQMWDAEAGTAIGPRIETGGMVAD 956



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 71/213 (33%), Gaps = 20/213 (9%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            VMD DG  +    P  + I   P +      +A  +   E+ + V  +      +   + 
Sbjct: 1185 VMDIDGQQVGEEVPDVEAITLSPAW-----NLAATSRMSENNVYVLPIGGDSQGSEVTLE 1239

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPD 312
               + +    F+ +G   L+S   D  +  +  +  +  +    L       +  ++SPD
Sbjct: 1240 GHTNRVGRLVFNPDG-SLLVSASDDTTVRRW--NPATGESVGGPLAGHTDEVLDLAFSPD 1296

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +++V     +   +L+ + + G                  + P G   A     G    
Sbjct: 1297 GTRLV-TGSADTTARLWDV-ATGRQIADPYVGHTEHVTSVAFDPDGGSFATGSRDGT--- 1351

Query: 373  IGVMKKDGSQE----RLLVEDSNLQAPTW-SPS 400
            + V     S E    +L    S+ Q   W SP 
Sbjct: 1352 VRVRSVTASPEMLCAKLTTNMSHKQWDEWVSPD 1384



 Score = 43.5 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 49/344 (14%), Positives = 100/344 (29%), Gaps = 42/344 (12%)

Query: 108  AQVLVTGRVIKE----GKDRLRVEFRLWDVKDRKQIIGKKF--------FSSPASWRKIA 155
               + T     +             R+WD      +    +               R IA
Sbjct: 992  VNAVTTVSFSPDSQVLATGSADATVRVWDADTGAFLWNVMYGHEGRIWGLVYSPDGRHIA 1051

Query: 156  HTISD---DIYQSITGEKGDFNSRILFVSESVVSGII------KNSLCVMDRDGANIRYL 206
               SD    I+  +  +    ++  +        G          ++ + D D       
Sbjct: 1052 SASSDGTVRIWNPLGSQPLLGHTAAVRDLSYSPDGEFMASAGEDGTVRLWDPDTH----Q 1107

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRF 265
               R      P ++ +  + +       D   V L +    +   R    R   I    F
Sbjct: 1108 LLGRPLDAGVPLYALDFSEDSSTLVAGGDGGTVVLWNMGSRQVAGRYETGRAGAIRTLEF 1167

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREG 324
               G+R  + +  D       +D+      E + +   I +S +++     +   S R  
Sbjct: 1168 EDKGERLSV-LDWDGVAS--VMDIDGQQVGEEVPDVEAITLSPAWN-----LAATS-RMS 1218

Query: 325  KEQLYVMQSNGSDQ-KRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            +  +YV+   G  Q   ++ +   +     V++P G L+                 +   
Sbjct: 1219 ENNVYVLPIGGDSQGSEVTLEGHTNRVGRLVFNPDGSLLVSASDDTTVRRWNPATGESVG 1278

Query: 383  ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              L      +    +SP G  L+       DT ++L+ +   GR
Sbjct: 1279 GPLAGHTDEVLDLAFSPDGTRLV---TGSADTTARLWDV-ATGR 1318


>gi|318077647|ref|ZP_07984979.1| WD-40 repeat-containing protein [Streptomyces sp. SA3_actF]
          Length = 1776

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 43/334 (12%), Positives = 100/334 (29%), Gaps = 51/334 (15%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
             +          RLWDV   +++                H +   + +        F+  
Sbjct: 1443 TRLASAGSDGTVRLWDVATGRRL----------------HEL---VGRGNRLISAAFSPV 1483

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               ++ +  +G     + + D DG              +   FS + +++A A  DD   
Sbjct: 1484 GTVLATAGSTGH----VYLWDADGGAFLRELDVETDRTWAEAFSADGEEIATANDDD--- 1536

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-E 295
              V L          ++   +  + +  F+ +G     +   D  + ++    +  A   
Sbjct: 1537 -SVRLWRRATGSHGLQLDGHQGRVRSVAFAKDGATIA-TGCDDGRVRLW--HTRGGALAA 1592

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             L+       + ++ PD S +   S  +G   ++         + + ++     +     
Sbjct: 1593 TLSAHTDRVYAVAFGPDLSWLASAS-WDGTAVIWR----DGAARHVLREHTGKLWTAAAH 1647

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            P    +     +G+   I +           L      + + ++SP G  L        D
Sbjct: 1648 P---TLPLVATAGDDRVIRLWDPATGARVGALTGHSGRVYSLSFSPDGGHLA---SAGDD 1701

Query: 414  TGSKLYSIDLN--GRNETLINTPAYASDPQWVGF 445
               +L+ +  +      TL+          W  F
Sbjct: 1702 GTVRLWRVTGDAVTPKATLVGVQGG-----WAAF 1730



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 88/281 (31%), Gaps = 29/281 (10%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
               G +   +      + +G     + + D       +  P    +++   FSP+ + +A
Sbjct: 1166 HPDGVWPITLNATGTVLATGDGDGVVRLWDTASGEQTHAFPGHTVLVYTTVFSPDGRTLA 1225

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                  +    V L DT        +G  +  +   RFS +G   L +   +   D  +V
Sbjct: 1226 ----TGDRSGTVRLWDTVTGALVASLGPHQGPVFRVRFSPDGT--LFATADEGIDDHGTV 1279

Query: 288  DLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
             +   + +RL +          +  + PD   +    D +G  +L+              
Sbjct: 1280 RIWRASDQRLLHEMRGHTGRVYTLDFHPDGDLLA-SGDTDGGVRLW--DPRTGLPGPALD 1336

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---------RLLVEDSNLQA 394
                  +  V++  G  +A    +G   A+ + +     E         +      +  A
Sbjct: 1337 KGAGGVYQVVFADDGRHLAACHSNG---AVRLWQLSAGHEGYEAAPERFQPTPHQGSAWA 1393

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
              + P    L+       D   +++     G+ + ++    
Sbjct: 1394 CRFRPDDTQLV---TAGDDGVVQIWDA-ATGQGKPILRGHG 1430



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 92/322 (28%), Gaps = 40/322 (12%)

Query: 112  VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
             TG V+  G     V  RLWD    +Q                 HT+   +Y ++    G
Sbjct: 1177 ATGTVLATGDGDGVV--RLWDTASGEQTHA-----------FPGHTV--LVYTTVFSPDG 1221

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
                       ++ +G    ++ + D     +          +F  RFSP+    A A  
Sbjct: 1222 ----------RTLATGDRSGTVRLWDTVTGALVASLGPHQGPVFRVRFSPDGTLFATADE 1271

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              +D   V +      R    +      +    F  +G     S   D  + ++  D ++
Sbjct: 1272 GIDDHGTVRIWRASDQRLLHEMRGHTGRVYTLDFHPDGDLLA-SGDTDGGVRLW--DPRT 1328

Query: 292  NATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD----QKRIS-QDK 345
                  L           ++ D   +       G  +L+ + +         +R      
Sbjct: 1329 GLPGPALDKGAGGVYQVVFADDGRHLAAC-HSNGAVRLWQLSAGHEGYEAAPERFQPTPH 1387

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            + S +   + P    +  T        I        +  L      + A  +  +G  L 
Sbjct: 1388 QGSAWACRFRPDDTQLV-TAGDDGVVQIWDAATGQGKPILRGHGRRVNAVAFDATGTRLA 1446

Query: 406  FSRKKDGDTGSKLYSIDLNGRN 427
                   D   +L+ +   GR 
Sbjct: 1447 ---SAGSDGTVRLWDV-ATGRR 1464



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 67/208 (32%), Gaps = 10/208 (4%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             + A  R+         +  RF P+  ++        D   V + D    +    +    
Sbjct: 1375 YEAAPERFQPTPHQGSAWACRFRPDDTQLV----TAGDDGVVQIWDAATGQGKPILRGHG 1430

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              + A  F + G R   S   D  + ++ V         L       ISA++SP  + + 
Sbjct: 1431 RRVNAVAFDATGTRLA-SAGSDGTVRLWDV-ATGRRLHELVGRGNRLISAAFSPVGTVLA 1488

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                      +Y+  ++G    R    +    +   +S  G+ IA T    +   +    
Sbjct: 1489 ---TAGSTGHVYLWDADGGAFLRELDVETDRTWAEAFSADGEEIA-TANDDDSVRLWRRA 1544

Query: 378  KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  +L      +++  ++  G ++ 
Sbjct: 1545 TGSHGLQLDGHQGRVRSVAFAKDGATIA 1572



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 62/191 (32%), Gaps = 11/191 (5%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++ +G     + +    G  +     +    ++   F P+   +A A++D      ++  
Sbjct: 1570 TIATGCDDGRVRLWHTRGGALAATLSAHTDRVYAVAFGPDLSWLASASWD--GTAVIWRD 1627

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                    +  G   +    P         L++   D+ +              LT    
Sbjct: 1628 GAARHVLREHTGKLWTAAAHPTLP------LVATAGDDRVIRLWDPATGARVGALTGHSG 1681

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S S+SPD   +    D +G  +L+ +  +    K      +  +    ++P G   A
Sbjct: 1682 RVYSLSFSPDGGHLASAGD-DGTVRLWRVTGDAVTPKATLVGVQGGWA--AFTPDGGYKA 1738

Query: 363  FTKFSGEKFAI 373
              +  GE + +
Sbjct: 1739 EGEVGGEFWHV 1749


>gi|310821900|ref|YP_003954258.1| hypothetical protein STAUR_4651 [Stigmatella aurantiaca DW4/3-1]
 gi|309394972|gb|ADO72431.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1052

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 78/230 (33%), Gaps = 14/230 (6%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----D 283
             Y+ +  +R     T +    K I +  S +    F+  G    +     ++       
Sbjct: 344 TVYERDGRVRFSRRLTLLLPGRKWISSDPSAMSGLSFTQEGALLYLVAADIDSQGAYLSR 403

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS- 342
           ++ VD ++    R T  L   +    +PD +  VF   R     L  +       + ++ 
Sbjct: 404 LWRVDARTGEVLR-TWDLQEGMGGGVTPDGTGYVFVDVRGDTANLARLNLESGQTEPLTR 462

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            +   S   P  SP G  + F     + + + + +  G    L  +     +P W     
Sbjct: 463 FEGHLSLGPPAVSPDGHRVVFPMRGPQGWDLALREPAGDVRWLTRDGLFNYSPQW-VDAD 521

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-----WVGFMD 447
            ++F R+ +G   +    +   G    + + P    D Q      V F++
Sbjct: 522 QVLFLREHEGRLQAHTLRLS-TGEIVRITDAPHLVMDAQPVGNGQVAFLN 570



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 44/138 (31%), Gaps = 17/138 (12%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G             L  P  SP+  +V +     +      L         + +      
Sbjct: 455 GQTEPLTRFEGHLSLGPPAVSPDGHRVVFPMRGPQGW---DLALREPAGDVRWLTRDGLF 511

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             +P++  +  + L   + +  +  +++ L +    R+T             D+  +V +
Sbjct: 512 NYSPQW-VDADQVLFLREHEGRLQAHTLRLSTGEIVRIT-------------DAPHLVMD 557

Query: 320 SDREGKEQLYVMQSNGSD 337
           +   G  Q+  +  +G +
Sbjct: 558 AQPVGNGQVAFLNRDGYN 575


>gi|312194747|ref|YP_004014808.1| hypothetical protein FraEuI1c_0860 [Frankia sp. EuI1c]
 gi|311226083|gb|ADP78938.1| WD40 repeat, subgroup [Frankia sp. EuI1c]
          Length = 531

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 82/249 (32%), Gaps = 35/249 (14%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
             D   +          ++   FSP+ Q +A A+ D    +R++ +  R  R  K + + 
Sbjct: 294 PADPGPLGQPLTGHSDWVWSVAFSPDGQILATASDD--KTVRLWDVAGR-RRLGKPLTSD 350

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-----------------RLTN 299
           ++ +LA  FS +GK        D    ++ +   +                     RLT 
Sbjct: 351 KAPMLAVAFSPDGKTLA--TGDDNKTQLWDLSDPARPQRLGTLLVTEPTRRRRLGARLTE 408

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWS 355
                 S ++SPD   +       G   +++       + +                 ++
Sbjct: 409 EKAWVSSVAFSPDGRALA---TAGGDRAVWLWDVTDPARPQALGQPLTGHTDDVRSVAFA 465

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           P G  +A            V     SQ   E L      +Q+  ++P GR L  +     
Sbjct: 466 PDGRTLASASIDNTLRLWDVTDPARSQALGEPLTGHTDGVQSVAFAPDGRILASAST--- 522

Query: 413 DTGSKLYSI 421
           D+  +L+ +
Sbjct: 523 DSTVRLWRL 531



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 88/233 (37%), Gaps = 27/233 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  + D    L             + +      + +  FS +G + L +  
Sbjct: 269 AFSPDGQTLATTSDDTTVQLWDLTDPADPGPLGQPLTGHSDWVWSVAFSPDG-QILATAS 327

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + ++ V  +    + LT+     ++ ++SPD   +   +  + K QL+ +      
Sbjct: 328 DDKTVRLWDVAGRRRLGKPLTSDKAPMLAVAFSPDGKTLA--TGDDNKTQLWDLSDPARP 385

Query: 338 QK-----------------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           Q+                 R++++K A      +SP G  +A        +   V     
Sbjct: 386 QRLGTLLVTEPTRRRRLGARLTEEK-AWVSSVAFSPDGRALATAGGDRAVWLWDVTDPAR 444

Query: 381 SQ---ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            Q   + L     ++++  ++P GR+L  +     D   +L+ +    R++ L
Sbjct: 445 PQALGQPLTGHTDDVRSVAFAPDGRTLASASI---DNTLRLWDVTDPARSQAL 494



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 52/273 (19%), Positives = 93/273 (34%), Gaps = 39/273 (14%)

Query: 185 VSGIIKNSLCVMDRDGANIRYL---TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            S   + +      D A  R L          +    FSP+ Q +A A+ D      V L
Sbjct: 188 SSKGRRATRRPAPADPAGPRPLGDPLTGHTAGVQSLAFSPDGQLLATASADT----TVRL 243

Query: 242 MDTRIDRAPKRIGNFRSMI---LAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATER 296
            +      P+ +G         L+  FS +G+    +   D  + ++ +          +
Sbjct: 244 WNVTDPADPEPLGQPLDGNARLLSVAFSPDGQTLA-TTSDDTTVQLWDLTDPADPGPLGQ 302

Query: 297 -LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--KRISQDKEASYFDPV 353
            LT       S ++SPD   +   SD    + + +    G  +  K ++ DK A      
Sbjct: 303 PLTGHSDWVWSVAFSPDGQILATASD---DKTVRLWDVAGRRRLGKPLTSDK-APMLAVA 358

Query: 354 WSPQGDLIAFTKFSGEKF-------------AIGVMKKDGS---QERLLVEDSNLQAPTW 397
           +SP G  +A    +  +               + V +         RL  E + + +  +
Sbjct: 359 FSPDGKTLATGDDNKTQLWDLSDPARPQRLGTLLVTEPTRRRRLGARLTEEKAWVSSVAF 418

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           SP GR+L       GD    L+ +    R + L
Sbjct: 419 SPDGRALA---TAGGDRAVWLWDVTDPARPQAL 448



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 46/164 (28%), Gaps = 12/164 (7%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISASYSPDSSQIVFESDREGKEQ 327
           A  S  K                  L    T       S ++SPD   +   S       
Sbjct: 184 ATWSSSKGRRATRRPAPADPAGPRPLGDPLTGHTAGVQSLAFSPDGQLLATASADTTVRL 243

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERL 385
             V      +      D  A      +SP G  +A T          +      G   + 
Sbjct: 244 WNVTDPADPEPLGQPLDGNARLLSVAFSPDGQTLATTSDDTTVQLWDLTDPADPGPLGQP 303

Query: 386 LVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           L   S+   +  +SP G+ L  +     D   +L+  D+ GR  
Sbjct: 304 LTGHSDWVWSVAFSPDGQILATASD---DKTVRLW--DVAGRRR 342



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 74/210 (35%), Gaps = 11/210 (5%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+++    D   V  RLWDV  R+++ GK   S  A    +A   S D          D 
Sbjct: 320 GQILATASDDKTV--RLWDVAGRRRL-GKPLTSDKAPMLAVA--FSPD--GKTLATGDDN 372

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +++  +S+      +   L         +          +    FSP+ + +A A  D 
Sbjct: 373 KTQLWDLSDPARPQRLGTLLVTEPTRRRRLGARLTEEKAWVSSVAFSPDGRALATAGGDR 432

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQS 291
              L       R     + +      + +  F+ +G+    S   D  + ++ V    +S
Sbjct: 433 AVWLWDVTDPARPQALGQPLTGHTDDVRSVAFAPDGRTLA-SASIDNTLRLWDVTDPARS 491

Query: 292 NAT-ERLTNTLFINISASYSPDSSQIVFES 320
            A  E LT       S +++PD   +   S
Sbjct: 492 QALGEPLTGHTDGVQSVAFAPDGRILASAS 521



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 68/182 (37%), Gaps = 21/182 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           G+ +  G D      +LWD+ D  R Q +G    + P   R++           +T EK 
Sbjct: 363 GKTLATGDDNKT---QLWDLSDPARPQRLGTLLVTEPTRRRRLG--------ARLTEEK- 410

Query: 172 DFNSRILFVSESVV--SGIIKNSLCVMDR-DGANIRYL---TPSRDQILFEPRFSPNQQK 225
            + S + F  +     +     ++ + D  D A  + L          +    F+P+ + 
Sbjct: 411 AWVSSVAFSPDGRALATAGGDRAVWLWDVTDPARPQALGQPLTGHTDDVRSVAFAPDGRT 470

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A A+ D+   L       R     + +      + +  F+ +G R L S   D  + ++
Sbjct: 471 LASASIDNTLRLWDVTDPARSQALGEPLTGHTDGVQSVAFAPDG-RILASASTDSTVRLW 529

Query: 286 SV 287
            +
Sbjct: 530 RL 531


>gi|83776056|dbj|BAE66175.1| unnamed protein product [Aspergillus oryzae]
          Length = 254

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 68/189 (35%), Gaps = 14/189 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                  + +    FSP+ + +A  + D+     + L DT      + +    S++ +  
Sbjct: 12  RTLEGHSRSVHSVAFSPDGRTLASGSDDN----TIKLWDTTTGTERQTLKGHSSLVYSVA 67

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G+    S   D  + ++  D  ++   + L     +  S ++SPD   +   SD  
Sbjct: 68  FSPDGRTLA-SGSDDNTIKLW--DTTTDTERQTLKGHSSLVYSVAFSPDGRTLASGSD-- 122

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + +  +    + +  +   +S    V+S  G  +A          I +       E
Sbjct: 123 -DNTIKLWDTTTGTECQTLEGHSSSVESVVFSLDGRTLASGSHDNT---IKLWDTTTGTE 178

Query: 384 RLLVEDSNL 392
           R  ++  + 
Sbjct: 179 RQTLKGRSD 187



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 61/183 (33%), Gaps = 15/183 (8%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASY 309
           + +      + +  FS +G+    S   D  + ++  D  +    + L     +  S ++
Sbjct: 12  RTLEGHSRSVHSVAFSPDGRTLA-SGSDDNTIKLW--DTTTGTERQTLKGHSSLVYSVAF 68

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   +   SD      + +  +    +++  +   +  +   +SP G  +A       
Sbjct: 69  SPDGRTLASGSD---DNTIKLWDTTTDTERQTLKGHSSLVYSVAFSPDGRTLASGSDDNT 125

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              I +       E   +E  +    +      GR+L        D   KL+        
Sbjct: 126 ---IKLWDTTTGTECQTLEGHSSSVESVVFSLDGRTLASGSH---DNTIKLWDTTTGTER 179

Query: 428 ETL 430
           +TL
Sbjct: 180 QTL 182



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 53/144 (36%), Gaps = 7/144 (4%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +D+  ++   L        S ++SPD   +   SD      + +  +    +++  +   
Sbjct: 4   IDILKSSIRTLEGHSRSVHSVAFSPDGRTLASGSD---DNTIKLWDTTTGTERQTLKGHS 60

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           +  +   +SP G  +A +        +     D  ++ L    S + +  +SP GR+L  
Sbjct: 61  SLVYSVAFSPDGRTLA-SGSDDNTIKLWDTTTDTERQTLKGHSSLVYSVAFSPDGRTLAS 119

Query: 407 SRKKDGDTGSKLYSIDLNGRNETL 430
                 D   KL+        +TL
Sbjct: 120 GSD---DNTIKLWDTTTGTECQTL 140



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 67/180 (37%), Gaps = 11/180 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++ SG   N++ + D      R        +++   FSP+ + +A  + D+     + L
Sbjct: 31  RTLASGSDDNTIKLWDTTTGTERQTLKGHSSLVYSVAFSPDGRTLASGSDDN----TIKL 86

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            DT  D   + +    S++ +  FS +G+    S   D  + ++  D  +    + L   
Sbjct: 87  WDTTTDTERQTLKGHSSLVYSVAFSPDGRTLA-SGSDDNTIKLW--DTTTGTECQTLEGH 143

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S  +S D   +   S       + +  +    +++  + +  S    +  P  +L
Sbjct: 144 SSSVESVVFSLDGRTLASGSH---DNTIKLWDTTTGTERQTLKGRSDSVETVLNEPNSNL 200


>gi|120437767|ref|YP_863453.1| secreted dipeptidyl-peptidase IV family protein [Gramella forsetii
           KT0803]
 gi|117579917|emb|CAL68386.1| secreted dipeptidyl-peptidase IV family protein [Gramella forsetii
           KT0803]
          Length = 791

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/201 (12%), Positives = 66/201 (32%), Gaps = 6/201 (2%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +NI +       ++         + +A    +   +  +         A   IG      
Sbjct: 333 SNIHFSENGEKAVVNLRSTDNKDRWIALLDLEKGTLKSIEHQRDEAWLAGPGIGYTYYGY 392

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +  + K      ++     +Y +++++   + LT+  +     S S D     F S
Sbjct: 393 EELGWLPDNKHIYFQSEETGYSHLYILNVENGKKKDLTSGDYEVFDPSLSNDKKHWYFTS 452

Query: 321 D--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMK 377
                G+   Y M   G   ++++     +      SP  + +A T  +  +   + + K
Sbjct: 453 SKMHAGERHFYKMPVMGGKMEQLTSMTGKNDVKH--SPNEEYMAITYSYMNKPEELYLKK 510

Query: 378 KDG-SQERLLVEDSNLQAPTW 397
               S+ + L    + +  ++
Sbjct: 511 PGSKSEPQQLTSGQSEEFSSY 531



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 31/195 (15%)

Query: 265 FSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTN--------TLFINI------SAS 308
           FS NG++A+++++  +  D +   +DL+    + + +           I           
Sbjct: 337 FSENGEKAVVNLRSTDNKDRWIALLDLEKGTLKSIEHQRDEAWLAGPGIGYTYYGYEELG 396

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--F 366
           + PD+  I F+S+  G   LY++      +K ++   +   FDP  S       FT    
Sbjct: 397 WLPDNKHIYFQSEETGYSHLYILNVENGKKKDLTS-GDYEVFDPSLSNDKKHWYFTSSKM 455

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              +     M   G +   L   +       SP+   +  +         +LY       
Sbjct: 456 HAGERHFYKMPVMGGKMEQLTSMTGKNDVKHSPNEEYMAITYSYMNKPE-ELY------- 507

Query: 427 NETLINTPAYASDPQ 441
               +  P   S+PQ
Sbjct: 508 ----LKKPGSKSEPQ 518



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 65/208 (31%), Gaps = 35/208 (16%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVD--LQSNATERLTNTLFINISASYSPD------SSQI 316
            S NGK A  S+   E+ +   V   +  +   +  +T        YS +          
Sbjct: 237 VSPNGKYAGFSIIDRESGENTIVPNYVDESGYTKDISTRSKVGEMDYSAELALYNFEKDT 296

Query: 317 VFESDREGKEQL-----YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGE 369
           VF  D  G   +     Y       + K   + +     +  +S  G+           +
Sbjct: 297 VFIVDVSGLPGIAKLPDYTSDYPDKEWKE--EPRGVIPSNIHFSENGEKAVVNLRSTDNK 354

Query: 370 KFAIGVMKKDGSQERLLVEDSN---------------LQAPTWSPSGRSLIFSRKKDGDT 414
              I ++  +    + +    +                +   W P  + + F  ++ G  
Sbjct: 355 DRWIALLDLEKGTLKSIEHQRDEAWLAGPGIGYTYYGYEELGWLPDNKHIYFQSEETG-- 412

Query: 415 GSKLYSIDL-NGRNETLINTPAYASDPQ 441
            S LY +++ NG+ + L +      DP 
Sbjct: 413 YSHLYILNVENGKKKDLTSGDYEVFDPS 440


>gi|115373049|ref|ZP_01460352.1| hypothetical protein STIAU_6901 [Stigmatella aurantiaca DW4/3-1]
 gi|115369961|gb|EAU68893.1| hypothetical protein STIAU_6901 [Stigmatella aurantiaca DW4/3-1]
          Length = 1034

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 78/230 (33%), Gaps = 14/230 (6%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----D 283
             Y+ +  +R     T +    K I +  S +    F+  G    +     ++       
Sbjct: 326 TVYERDGRVRFSRRLTLLLPGRKWISSDPSAMSGLSFTQEGALLYLVAADIDSQGAYLSR 385

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS- 342
           ++ VD ++    R T  L   +    +PD +  VF   R     L  +       + ++ 
Sbjct: 386 LWRVDARTGEVLR-TWDLQEGMGGGVTPDGTGYVFVDVRGDTANLARLNLESGQTEPLTR 444

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            +   S   P  SP G  + F     + + + + +  G    L  +     +P W     
Sbjct: 445 FEGHLSLGPPAVSPDGHRVVFPMRGPQGWDLALREPAGDVRWLTRDGLFNYSPQW-VDAD 503

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-----WVGFMD 447
            ++F R+ +G   +    +   G    + + P    D Q      V F++
Sbjct: 504 QVLFLREHEGRLQAHTLRLS-TGEIVRITDAPHLVMDAQPVGNGQVAFLN 552



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 44/138 (31%), Gaps = 17/138 (12%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G             L  P  SP+  +V +     +      L         + +      
Sbjct: 437 GQTEPLTRFEGHLSLGPPAVSPDGHRVVFPMRGPQGW---DLALREPAGDVRWLTRDGLF 493

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             +P++  +  + L   + +  +  +++ L +    R+T             D+  +V +
Sbjct: 494 NYSPQW-VDADQVLFLREHEGRLQAHTLRLSTGEIVRIT-------------DAPHLVMD 539

Query: 320 SDREGKEQLYVMQSNGSD 337
           +   G  Q+  +  +G +
Sbjct: 540 AQPVGNGQVAFLNRDGYN 557


>gi|307151241|ref|YP_003886625.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306981469|gb|ADN13350.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 729

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 75/226 (33%), Gaps = 16/226 (7%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V+SG    +L + D     + Y     +  +     + +  KV   ++D      + + 
Sbjct: 417 KVISGSRDKTLKIWDLATGKLEYTLTGHNDSVSAVAVTSDGTKVISRSWDK----TLKIW 472

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTL 301
           D    +    +      + A   + +GK+ +IS   D+ + ++  DL +   E  LT   
Sbjct: 473 DLATGKLEYTLTGHNDSVNAVGVTPDGKK-VISEIDDKTLKVW--DLATGKIEYILTGHN 529

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           F   + + +PD  +++  S       L V       ++ I             +P    +
Sbjct: 530 FWVNAVAVTPDGQKLISGSS---DNTLKVWDLATGKEEYILTGHNFWVNAIAVTPDRKKV 586

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS--PSGRSLI 405
                      + V      +E   +   N      +  P G+ +I
Sbjct: 587 ISGSRENT---LKVWDLATGKEEYTLTGHNYSVNAIAVTPDGKKVI 629



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 88/246 (35%), Gaps = 20/246 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V+S I   +L V D     I Y+    +  +     +P+ QK+   + D+     + +
Sbjct: 500 KKVISEIDDKTLKVWDLATGKIEYILTGHNFWVNAVAVTPDGQKLISGSSDN----TLKV 555

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D    +    +      + A   + + K+ +IS  ++  + ++  DL +   E  LT  
Sbjct: 556 WDLATGKEEYILTGHNFWVNAIAVTPDRKK-VISGSRENTLKVW--DLATGKEEYTLTGH 612

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +   + + +PD  +++  S     + L +        +               +P G  
Sbjct: 613 NYSVNAIAVTPDGKKVISGS---WDKTLKIWDLATGKLEYTLTGHNFWVNAVAVTPDGKK 669

Query: 361 IAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +           + V   D  +       ++ +     +P G +++      GD+  +++
Sbjct: 670 VISGSDDKT---LKVWDLDRGECIATFTAEAWITCCAVAPDGVTIV-----AGDSSGQVH 721

Query: 420 SIDLNG 425
            + L G
Sbjct: 722 FLRLMG 727



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 65/191 (34%), Gaps = 17/191 (8%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SY 309
           + +   ++ + A   + +GK+ +IS   D  + I+  DL +   E        +++A + 
Sbjct: 145 RTLTGHKNSVSAVAVTPDGKK-VISGSGDNTLKIW--DLATGKEEYTLRGHNDSVNAVAV 201

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +PD  +++  S     + L V       +K   +    S      +  G  +        
Sbjct: 202 TPDEKKLISGSS---DKTLKVWDLATGKEKYTLRGHNDSVNAVAVTRDGKKVISGSSDKT 258

Query: 370 KFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              + V      +E+  +   N    A   +  G+ +I      G     L   DL   N
Sbjct: 259 ---LKVWDLATGKEKYTLRGHNDSVNAVAVTRDGKKVI-----SGSDDKTLKVWDLATGN 310

Query: 428 ETLINTPAYAS 438
           E    T    S
Sbjct: 311 EEYTLTGHNDS 321


>gi|298374706|ref|ZP_06984664.1| cytochrome c binding protein [Bacteroides sp. 3_1_19]
 gi|298269074|gb|EFI10729.1| cytochrome c binding protein [Bacteroides sp. 3_1_19]
          Length = 490

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 62/195 (31%), Gaps = 48/195 (24%)

Query: 263 PRFSSNGKRALISVQK----------------DEAMDIYSVDLQSNATER---LTNTLFI 303
           P +  +GK    SV K                D A D+   D Q +       L++    
Sbjct: 225 PSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDSASDVVVYDTQKHEIVTSPLLSSEGAF 284

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD------------ 351
               ++SPD + + F S +  +           D   +S D     F             
Sbjct: 285 ETFPTFSPDGNTLYFCSAKA-RTMPKEYDQVRYDLCSVSFDPATRRFGTVVDTLYKASEI 343

Query: 352 ------PVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLL--VEDSNLQAP- 395
                 P  SP G  + +T      F+I        ++     Q   L      ++++  
Sbjct: 344 DKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLYMIDLSTLQSYPLEAANSDDVESYH 403

Query: 396 TWSPSGRSLIFSRKK 410
           +WS   R ++FS ++
Sbjct: 404 SWSSDSRWIVFSSRR 418



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 49/142 (34%), Gaps = 25/142 (17%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM------DTRIDRAPKRIGNF--- 256
           L  S       P FSP+   + + +     + + Y            D A +R G     
Sbjct: 277 LLSSEGAFETFPTFSPDGNTLYFCSAKARTMPKEYDQVRYDLCSVSFDPATRRFGTVVDT 336

Query: 257 -------RSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLF 302
                     +  PR S +GK  L ++             D+Y +DL +  +  L     
Sbjct: 337 LYKASEIDKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLYMIDLSTLQSYPLEAANS 396

Query: 303 INIS--ASYSPDSSQIVFESDR 322
            ++    S+S DS  IVF S R
Sbjct: 397 DDVESYHSWSSDSRWIVFSSRR 418



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 58/220 (26%), Gaps = 46/220 (20%)

Query: 194 CVMDRDGANIRYLTPSRDQ---ILFEPRFSPNQQKVAYATYDDEDILR------------ 238
           C +  DG  +  L    DQ    L  P + P+ + VA++    +                
Sbjct: 199 CTLLIDGDKVEKLNTKTDQTLSPLVYPSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDS 258

Query: 239 -----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE---------AMDI 284
                VY            + +  +    P FS +G        K             D+
Sbjct: 259 ASDVVVYDTQKHEIVTSPLLSSEGAFETFPTFSPDGNTLYFCSAKARTMPKEYDQVRYDL 318

Query: 285 YSVDLQ------SNATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            SV             + L     I+ S      SPD   +++     G   ++   ++ 
Sbjct: 319 CSVSFDPATRRFGTVVDTLYKASEIDKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADL 378

Query: 336 SDQKRIS--------QDKEASYFDPVWSPQGDLIAFTKFS 367
                 +         + +       WS     I F+   
Sbjct: 379 YMIDLSTLQSYPLEAANSDDVESYHSWSSDSRWIVFSSRR 418



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 66/190 (34%), Gaps = 51/190 (26%)

Query: 307 ASYSPDSSQIVFE----------SDR------EGKEQLYVMQSNGSD--QKRISQDKEAS 348
            S+ P    + F           +DR      +    + V  +   +     +   + A 
Sbjct: 225 PSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDSASDVVVYDTQKHEIVTSPLLSSEGAF 284

Query: 349 YFDPVWSPQGDLIAFTK---------FSGEKFAIGVMKKD------GSQERLLVE----D 389
              P +SP G+ + F           +   ++ +  +  D      G+    L +    D
Sbjct: 285 ETFPTFSPDGNTLYFCSAKARTMPKEYDQVRYDLCSVSFDPATRRFGTVVDTLYKASEID 344

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTG-----SKLYSIDLNGRNETLI---------NTPA 435
            ++  P  SP G+ L+++    G+       + LY IDL+      +         +  +
Sbjct: 345 KSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLYMIDLSTLQSYPLEAANSDDVESYHS 404

Query: 436 YASDPQWVGF 445
           ++SD +W+ F
Sbjct: 405 WSSDSRWIVF 414



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 15/111 (13%)

Query: 187 GIIKNSLCVMDRDGANIR--------YLTPSRDQILFEPRFSPNQQKVAYA-------TY 231
             ++  LC +  D A  R        Y     D+ +  PR SP+ + + Y        + 
Sbjct: 312 DQVRYDLCSVSFDPATRRFGTVVDTLYKASEIDKSVSFPRVSPDGKYLLYTLSGYGNFSI 371

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             +D     +  + +   P    N   +     +SS+ +  + S ++ + +
Sbjct: 372 WHKDADLYMIDLSTLQSYPLEAANSDDVESYHSWSSDSRWIVFSSRRIDGL 422


>gi|326202648|ref|ZP_08192516.1| WD40-like beta Propeller containing protein [Clostridium
           papyrosolvens DSM 2782]
 gi|325987232|gb|EGD48060.1| WD40-like beta Propeller containing protein [Clostridium
           papyrosolvens DSM 2782]
          Length = 704

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 66/209 (31%), Gaps = 44/209 (21%)

Query: 257 RSMILAPRFSSNGKRALISV----------QKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                +   S + K  + +            ++    I+ V++      +LT+    +  
Sbjct: 110 GGAFYSFDVSYDAKEIVFAYTDAQNSYGVWNQNTTYHIFKVNVDGTNLTQLTDGSVNDFD 169

Query: 307 ASYSPDSSQIVFESDREGKE-----------QLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             + PD  +IVF S+R G              L+ M ++GS+ + IS  +   +   V  
Sbjct: 170 PRWLPDG-RIVFISERRGGYGRCHQRTVPTFNLHTMNADGSNIRCISYHETNEWSPCV-- 226

Query: 356 PQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTW------------ 397
               +I +T++           +  +   DG   R +  +       W            
Sbjct: 227 DNNGMIVYTRWDYVDRGATHPHSAWITTPDGLDARAITLNYPNSGDEWWKNVPMMQNSLR 286

Query: 398 -SPSG-RSLIFSRKKDGDTGSKLYSIDLN 424
             P+  + +  +          L  ID +
Sbjct: 287 AIPNSNKYVATAAPHHAQNYGPLIVIDPD 315



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 53/153 (34%), Gaps = 25/153 (16%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI--------DRAPKRIGNFRSMILAPRFSSNGKR 271
           S + +++ +A  D ++   V+  +T               ++ +       PR+  +G+ 
Sbjct: 119 SYDAKEIVFAYTDAQNSYGVWNQNTTYHIFKVNVDGTNLTQLTDGSVNDFDPRWLPDGRI 178

Query: 272 ALISVQKDE----------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES- 320
             IS ++              ++++++   +    ++       S     +   IV+   
Sbjct: 179 VFISERRGGYGRCHQRTVPTFNLHTMNADGSNIRCISYHETNEWSPCVDNNG-MIVYTRW 237

Query: 321 ---DREGK--EQLYVMQSNGSDQKRISQDKEAS 348
              DR        ++   +G D + I+ +   S
Sbjct: 238 DYVDRGATHPHSAWITTPDGLDARAITLNYPNS 270


>gi|168697876|ref|ZP_02730153.1| WD-40 repeat protein, beta transducin-like protein [Gemmata
           obscuriglobus UQM 2246]
          Length = 1107

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 51/370 (13%), Positives = 106/370 (28%), Gaps = 58/370 (15%)

Query: 84  QDSFKQKITNP-DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDR 136
             S  +   NP D +  +   ++ G    V G V      R  V        R+WDV   
Sbjct: 163 PASRPKTPPNPLDPLHPYLVLDANGHTAQVQG-VAMTPDGRRVVTASRDRTVRVWDVTTG 221

Query: 137 KQIIGKKFFSSPA---------------------------SWRKIAHTISDDIYQSITGE 169
           + +   ++ + P                               + A     +  + +   
Sbjct: 222 ETLRTFRYPTGPGNEGMVQALALSPDGRLCAAAPFPLDLGQAGRPALVTDMETGRVVATP 281

Query: 170 KGDFNSRILFVSESVVS----GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           KG  N+               G   + + V D        L       +    FSPN  +
Sbjct: 282 KGHRNTVTALAYSPDGRFLGAGSGDHDISVWDARLWKPVGLLRGHSAPITGLSFSPNGLR 341

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                    +   +     R  +    + +      +  +S +G+   +    D  + ++
Sbjct: 342 SVSVAA---NRTALLWSGDRTQKPFVELRDGDHQARSVAWSPDGRTVAV-GNHDGTISLW 397

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQI--------VFESDREGKEQLYVMQSNGSD 337
             +      + LT      ++ +++PDS  +            DR       ++ +   +
Sbjct: 398 --NPDGTLRKTLTGLRNDILNLAFTPDSHSLLQCGVAPGALNRDR---FACTIIDAATGE 452

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT- 396
           ++   +           S  G L      +  +  +  +  DGS  + L           
Sbjct: 453 ERSRFEGHTNLVSAACLSADGALAVTAGGNDHEVHVWRVS-DGSPVQTLAGRGRAGWTVG 511

Query: 397 WSPSGRSLIF 406
           WSP GRS+ +
Sbjct: 512 WSPDGRSVAW 521



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/274 (14%), Positives = 82/274 (29%), Gaps = 62/274 (22%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                     D       +SP+ + VA   +D      + L +       K +   R+ I
Sbjct: 360 QKPFVELRDGDHQARSVAWSPDGRTVAVGNHDG----TISLWNPD-GTLRKTLTGLRNDI 414

Query: 261 LAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATE-RLTNTLFINISASYSPDSS 314
           L   F+ +    L       A++        +D  +     R      +  +A  S D +
Sbjct: 415 LNLAFTPDSHSLLQCGVAPGALNRDRFACTIIDAATGEERSRFEGHTNLVSAACLSADGA 474

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------- 367
             V     + +  ++ +  +GS  + ++    A +    WSP G  +A+   +       
Sbjct: 475 LAVTAGGNDHEVHVWRVS-DGSPVQTLAGRGRAGWTVG-WSPDGRSVAWGNSNARGATAL 532

Query: 368 ---------------GEKFAIGVMKKDGSQERL----------------------LVEDS 390
                             ++  V+ + G    L                      L   +
Sbjct: 533 ERAFELSELRFAGPPNGSYSGAVLTRGGRTLELTPNREMAIKNGSRTELLYRDTELSTSN 592

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           ++   TW P GR ++         G +L+  D N
Sbjct: 593 SVFCFTWLPDGRIVV-----GSQFGLQLFDPDTN 621



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/275 (17%), Positives = 85/275 (30%), Gaps = 49/275 (17%)

Query: 184 VVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           V +G   + + V    DG+ ++ L   R +  +   +SP+ + VA+   +        L 
Sbjct: 477 VTAGGNDHEVHVWRVSDGSPVQTL-AGRGRAGWTVGWSPDGRSVAWGNSNARGATA--LE 533

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                   +  G           +  G+   ++  ++ A+         + TE L     
Sbjct: 534 RAFELSELRFAGPPNGSYSGAVLTRGGRTLELTPNREMAIK------NGSRTELLYRDTE 587

Query: 303 INISAS-----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           ++ S S     + PD   +V       +  L +   + +   R       +      SP 
Sbjct: 588 LSTSNSVFCFTWLPDGRIVV-----GSQFGLQLFDPDTNQIVRSYAGSTDATTAIALSPD 642

Query: 358 GDLIAFTKFSGEKFAIGVMKKD-----------GSQERLLVEDSNLQAPTWSPSGRSLI- 405
               A T        I V + D           GS      ++    A   SP+G  L+ 
Sbjct: 643 ARYFATTS---GDMIIRVWRVDQRTPVLSLFCAGSDWVAWTQEGLYAA---SPNGERLMG 696

Query: 406 FSRKKDGDTGS-----------KLYSIDLNGRNET 429
           +     G TG             LY  D+ GR   
Sbjct: 697 WQVNTGGATGLGTAYSAAQFRKSLYRPDVIGRVLR 731


>gi|15643695|ref|NP_228741.1| hypothetical protein TM0933 [Thermotoga maritima MSB8]
 gi|4981471|gb|AAD36014.1|AE001757_7 hypothetical protein TM_0933 [Thermotoga maritima MSB8]
          Length = 389

 Score = 70.8 bits (172), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 95/262 (36%), Gaps = 14/262 (5%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y     E  DF+S     S   +SG     L ++DR   ++  L        + PR S +
Sbjct: 132 YHPALDEYSDFSSEYFVFSSERLSGNRN--LFLIDRKNGDLLSLPVYGSS-EYFPRISLD 188

Query: 223 QQKVAYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           Q+ + +      +    Y+ +        K I   R     P +  +    +   +   +
Sbjct: 189 QKYLLFQGSLHGNWGIYYMPISKDYSSKIKLISRGRFAAYNPNW-LDENTMVYVQEDATS 247

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +   DL +   +  T  L  +   + +  +  IVF   +E    +Y +  +G+    +
Sbjct: 248 NHLVVKDLVTMREK--TYDLPFDWVFTPAKGNQGIVFVGLKESNFGIYELLPDGTVT--V 303

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSP 399
            ++   + FDP     G+ + F+      F I     +  +   L E    +   P +S 
Sbjct: 304 LENSPYNEFDPDV--FGNYLIFSSNRDGVFRIYAKDLESGKVWCLTEKIPYDAFYPAFSE 361

Query: 400 SGRSLIFSRKKDGDTGSKLYSI 421
            G+ + FS  + G +   ++ +
Sbjct: 362 DGKLVAFSVYEKG-SEPDIWIV 382



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 76/213 (35%), Gaps = 16/213 (7%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            +   + + L    S+        + +     + I+ ++  R    + P +  ++  + Y
Sbjct: 183 PRISLDQKYLLFQGSLHGNWGIYYMPISKDYSSKIKLISRGR-FAAYNPNW-LDENTMVY 240

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSV 287
              D        ++   +    K        +  P     G +  +    K+    IY +
Sbjct: 241 VQEDA--TSNHLVVKDLVTMREKTYDLPFDWVFTPA---KGNQGIVFVGLKESNFGIYEL 295

Query: 288 DLQSNATERLTNTLFINISASYSPD--SSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            L       L N+ +      + PD   + ++F S+R+G  ++Y           +++  
Sbjct: 296 -LPDGTVTVLENSPYNE----FDPDVFGNYLIFSSNRDGVFRIYAKDLESGKVWCLTEKI 350

Query: 346 EASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMK 377
               F P +S  G L+AF+ +  G +  I +++
Sbjct: 351 PYDAFYPAFSEDGKLVAFSVYEKGSEPDIWIVR 383


>gi|168704547|ref|ZP_02736824.1| peptidase S9, prolyl oligopeptidase active site region [Gemmata
           obscuriglobus UQM 2246]
          Length = 679

 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 47/108 (43%), Gaps = 9/108 (8%)

Query: 264 RFSSNGKRALISVQKDE------AMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQI 316
             S +GK+   ++   +      + +++ VD       ++LT     +    +S D   +
Sbjct: 42  ALSPDGKQVAYTLATWDKKGDRRSTELWVVDTDGKGKPKQLTTDRANDRHPKWSADGKAV 101

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              ++R+GK Q++ +  +G+ +   S   +       ++P+ D + +T
Sbjct: 102 YALANRKGKAQVWKVPLDGAPEAVTS--AKGGVIGYDYAPKADAVFYT 147



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 42/103 (40%), Gaps = 10/103 (9%)

Query: 343 QDKEASYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQE--RLLVEDSNLQA 394
                +  +   SP G  +A+T      K       + V+  DG  +  +L  + +N + 
Sbjct: 32  YAGVNTITEIALSPDGKQVAYTLATWDKKGDRRSTELWVVDTDGKGKPKQLTTDRANDRH 91

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           P WS  G+++     + G   ++++ + L+G  E + +     
Sbjct: 92  PKWSADGKAVYALANRKGK--AQVWKVPLDGAPEAVTSAKGGV 132



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/296 (16%), Positives = 100/296 (33%), Gaps = 55/296 (18%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA--TYDDE 234
           ++ V     +    + +   D  G N           + E   SP+ ++VAY   T+D +
Sbjct: 11  VVAVGNLSAAPERTHDITPADYAGVN----------TITEIALSPDGKQVAYTLATWDKK 60

Query: 235 DILR---VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              R   ++++DT     PK++   R+    P++S++GK       +     ++ V L  
Sbjct: 61  GDRRSTELWVVDTDGKGKPKQLTTDRANDRHPKWSADGKAVYALANRKGKAQVWKVPLD- 119

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESD------------REGKEQL----------Y 329
            A E +T+     I   Y+P +  + +  D            RE   ++           
Sbjct: 120 GAPEAVTSAKGGVIGYDYAPKADAVFYTVDDTVTDKGDFLELREKFAKIEYGHNKRTVSK 179

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------FSGEKFAIGVMKKDGSQ 382
           +++ +  ++ R          +   +  G  +A           S  +  + V + DG  
Sbjct: 180 LLRIDPKEEPREVLANGRYIREFAVTTDGKRVAMVSALDDTVIRSEGESRVDVWE-DGKV 238

Query: 383 ERLLVEDSNLQAPT---------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                +    +A +         W+P+G    F    D      +      G+  T
Sbjct: 239 TTPPTDVYRAKAASPYAWLEGLAWNPAGTRFAFCAIHDAYPAEIIIGEWGEGKWTT 294



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 6/53 (11%)

Query: 398 SPSGRSLIFSR----KKDGDTGSKLYSIDLNGR--NETLINTPAYASDPQWVG 444
           SP G+ + ++     KK     ++L+ +D +G+   + L    A    P+W  
Sbjct: 44  SPDGKQVAYTLATWDKKGDRRSTELWVVDTDGKGKPKQLTTDRANDRHPKWSA 96



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 67/241 (27%), Gaps = 57/241 (23%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
            DR   E  + D   + +   K+  +  A+ R                 K   + + ++ 
Sbjct: 61  GDRRSTELWVVDTDGKGKP--KQLTTDRANDR---------------HPKWSADGKAVYA 103

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---------- 230
             +      K  +  +  DGA     +     I ++  ++P    V Y            
Sbjct: 104 LANR---KGKAQVWKVPLDGAPEAVTSAKGGVIGYD--YAPKADAVFYTVDDTVTDKGDF 158

Query: 231 -----------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                      Y         L+       P+ +      I     +++GKR  +    D
Sbjct: 159 LELREKFAKIEYGHNKRTVSKLLRIDPKEEPREVLANGRYIREFAVTTDGKRVAMVSALD 218

Query: 280 EAM----DIYSVDL--QSNATERLTN-TLFINISA-------SYSPDSSQIVFESDREGK 325
           + +        VD+      T   T+       S        +++P  ++  F +  +  
Sbjct: 219 DTVIRSEGESRVDVWEDGKVTTPPTDVYRAKAASPYAWLEGLAWNPAGTRFAFCAIHDAY 278

Query: 326 E 326
            
Sbjct: 279 P 279


>gi|170112354|ref|XP_001887379.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164637705|gb|EDR01988.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 655

 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 70/192 (36%), Gaps = 16/192 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  ++   + D    +      + +    +        + +  FS +G R + S  
Sbjct: 389 AFSPDGTRIVSGSSDGTVRISDAETGSLVGEPWR---GHDCQVWSVAFSPDGTRIV-SGS 444

Query: 278 KDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            DE + I+  D ++ +   + L        S ++SPD   +V  S  +   +++ +++ G
Sbjct: 445 GDETVRIW--DAKTGSPVGKPLEGHDGEVKSVAFSPDGILLVSGS-VDKTVRIWHVET-G 500

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-- 393
               +  +  +       +SP G  +       + + I +          +    +    
Sbjct: 501 RPVGKPLEGHDGEVKSVAFSPDGTRVV---SGSDDWTIRIWDAKTGTTVGVPLRGHRDCV 557

Query: 394 -APTWSPSGRSL 404
            +  +SP G+ +
Sbjct: 558 LSVAFSPDGKRI 569



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 94/241 (39%), Gaps = 17/241 (7%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE----- 182
           F++ DV D   + G +       +R    T+ + + Q++  +     +++  V+      
Sbjct: 339 FQILDVGDDHTVPGMRQR---EEYRHGLRTMRERLEQAVRVQAQLHQAQVTDVAFSPDGT 395

Query: 183 SVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +VSG    ++ + D   G+ +       D  ++   FSP+  ++   + D+   +R++ 
Sbjct: 396 RIVSGSSDGTVRISDAETGSLVGEPWRGHDCQVWSVAFSPDGTRIVSGSGDE--TVRIWD 453

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             T      K +      + +  FS +G   L+S   D+ + I+ V+      + L    
Sbjct: 454 AKTG-SPVGKPLEGHDGEVKSVAFSPDG-ILLVSGSVDKTVRIWHVETGRPVGKPLEGHD 511

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDL 360
               S ++SPD +++V  SD      + +  +       +  +          +SP G  
Sbjct: 512 GEVKSVAFSPDGTRVVSGSD---DWTIRIWDAKTGTTVGVPLRGHRDCVLSVAFSPDGKR 568

Query: 361 I 361
           I
Sbjct: 569 I 569



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 66/169 (39%), Gaps = 14/169 (8%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDS 313
            ++ +    FS +G R + S   D  + I   D ++ +   E          S ++SPD 
Sbjct: 381 HQAQVTDVAFSPDGTRIV-SGSSDGTVRIS--DAETGSLVGEPWRGHDCQVWSVAFSPDG 437

Query: 314 SQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           ++IV  S   G E + +  +  GS   +  +  +       +SP G L+  +    +   
Sbjct: 438 TRIVSGS---GDETVRIWDAKTGSPVGKPLEGHDGEVKSVAFSPDGILLV-SGSVDKTVR 493

Query: 373 IGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           I  ++      + L   D  +++  +SP G  ++       D   +++ 
Sbjct: 494 IWHVETGRPVGKPLEGHDGEVKSVAFSPDGTRVVSGSD---DWTIRIWD 539



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 49/161 (30%), Gaps = 23/161 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G       +    + ++  +       ++ +    +          +       E
Sbjct: 312 AISPDGTHVASGSKNGRMIQVWEAE----KMFQILDVGDDHTVP-----GMRQ----REE 358

Query: 324 GKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS- 381
            +  L  M+       R+ +Q  +A   D  +SP G  I      G    + +   +   
Sbjct: 359 YRHGLRTMRERLEQAVRVQAQLHQAQVTDVAFSPDGTRIVSGSSDGT---VRISDAETGS 415

Query: 382 --QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              E     D  + +  +SP G  ++      GD   +++ 
Sbjct: 416 LVGEPWRGHDCQVWSVAFSPDGTRIV---SGSGDETVRIWD 453


>gi|298248225|ref|ZP_06972030.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297550884|gb|EFH84750.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 303

 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 52/297 (17%), Positives = 98/297 (32%), Gaps = 45/297 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G ++  G D   +  RLW++  RK +        P S R +A +    I           
Sbjct: 32  GHILASGSDDKTI--RLWNLYSRKTL--HSLSGHPRSVRALAFSPDGHIL---------- 77

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                       SG     + + +     + Y   S+  ++    FSP+ + +A    D 
Sbjct: 78  -----------ASGGDDPIIRLWNPSNGQLLYTLNSQAGLVHGVAFSPDGRILAGGCADA 126

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L +    +    +    S + +  FS +G R L S   D  + ++  +  S  
Sbjct: 127 ----TIRLWNPHSGQLLSTLHGHTSYVESVAFSPDG-RILASGCSDATIRLW--NPHSGT 179

Query: 294 TERLTNTLFINI-SASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYF 350
              + N   + + S ++SPD   +       G     + +   +     R   D   +  
Sbjct: 180 LLHILNGNPLAVHSVAFSPDGHILA-----GGCADATIRLWHPSSGQFLRTLSDHRWAVA 234

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
              +SP G  +A   +      I +      +    L      + +  WSP GR L 
Sbjct: 235 SVAFSPDGHTLASGSYDRT---IRLWNPSSGRLLHTLTGHAFAVYSVAWSPDGRLLA 288



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 64/205 (31%), Gaps = 18/205 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                  + ++   FSP+   +A  + D      + L +    +    +      + A  
Sbjct: 14  RTLRGHTKNIYSVAFSPDGHILASGSDDK----TIRLWNLYSRKTLHSLSGHPRSVRALA 69

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G   L S   D  + +++          L +   +    ++SPD   +       G
Sbjct: 70  FSPDG-HILASGGDDPIIRLWN-PSNGQLLYTLNSQAGLVHGVAFSPDGRILA-----GG 122

Query: 325 --KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGS 381
                + +   +            +      +SP G ++A          I +     G+
Sbjct: 123 CADATIRLWNPHSGQLLSTLHGHTSYVESVAFSPDGRILASGCSDAT---IRLWNPHSGT 179

Query: 382 QERLLVEDSN-LQAPTWSPSGRSLI 405
              +L  +   + +  +SP G  L 
Sbjct: 180 LLHILNGNPLAVHSVAFSPDGHILA 204



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 55/166 (33%), Gaps = 12/166 (7%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTL 301
            +   +  + +      I +  FS +G   L S   D+ + ++  +L S      L+   
Sbjct: 6   QSPTWKPLRTLRGHTKNIYSVAFSPDG-HILASGSDDKTIRLW--NLYSRKTLHSLSGHP 62

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               + ++SPD   +    D      + +   +          +        +SP G ++
Sbjct: 63  RSVRALAFSPDGHILASGGD---DPIIRLWNPSNGQLLYTLNSQAGLVHGVAFSPDGRIL 119

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
           A          I +      Q    +    S +++  +SP GR L 
Sbjct: 120 AGGCADAT---IRLWNPHSGQLLSTLHGHTSYVESVAFSPDGRILA 162


>gi|291296862|ref|YP_003508260.1| WD-40 repeat protein [Meiothermus ruber DSM 1279]
 gi|290471821|gb|ADD29240.1| WD-40 repeat protein [Meiothermus ruber DSM 1279]
          Length = 565

 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 89/263 (33%), Gaps = 21/263 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG     + + +R G  I  L+ +  +I     FSP+ Q +A  + D        L  T 
Sbjct: 298 SGGWDGEVWLWNRQGQPIHRLSEAALEITAL-AFSPDGQYLAAGSRDG----LTRLYQTG 352

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R  + +    + + A  F+ NG+    +  +D  + ++    Q               
Sbjct: 353 SGRLLQSLEAHGNGVGALAFAPNGRALA-TGGRDRLIRLWD-WRQGRKVLEFRAHESHVT 410

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++SPD   + + S  +     + ++  G    R         +    SP G L+A   
Sbjct: 411 GLAFSPDGRTL-YSSSSDESLAWWALRPEGVGLLRRVMAHARGLYGLALSPNGRLLATAS 469

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-- 421
                  + +      +   ++E      QA  +SP G+ L        D   +L+S+  
Sbjct: 470 HDQT---LKLWDAQSGKLLRVLEGHTEAAQALAFSPDGQRLA---SVGWDKTLRLWSVQG 523

Query: 422 ---DLNGRNETLINTPAYASDPQ 441
                       +   A+A D +
Sbjct: 524 PLLQTTSGFVRPLYAVAWAPDGR 546



 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 68/342 (19%), Positives = 121/342 (35%), Gaps = 30/342 (8%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR--KQIIGKKFFSSPAS 150
           NP S  R     SL  + L  G   +        + +LW  + R  +Q    +   S   
Sbjct: 153 NPQSGHRLPLLGSLSVRALAWGPDGQLATGDRDGQIQLWSAEGRYVQQWSAHRLAVSALV 212

Query: 151 WRKIAHTISD----DIYQSITGEKG-----DFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
           WRK A  IS      I    TG             +      ++SG       +   DG 
Sbjct: 213 WRKRAQLISGGQDGQIIFWDTGRPQKTLQTASVLALAVGESRLLSGHDDGRARLWSLDGG 272

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
            +R L P    +     +SP+ + +A   +D E    V+L + R  +   R+      I 
Sbjct: 273 LLRTLEPPAASVSAL-AYSPDGRLLASGGWDGE----VWLWN-RQGQPIHRLSEAALEIT 326

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           A  FS +G+    +  +D    +Y         + L        + +++P+   +     
Sbjct: 327 ALAFSPDGQYLA-AGSRDGLTRLYQT-GSGRLLQSLEAHGNGVGALAFAPNGRALA---- 380

Query: 322 REGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             G+++L  +      +K +     E+      +SP G  + ++  S E  A   ++ +G
Sbjct: 381 TGGRDRLIRLWDWRQGRKVLEFRAHESHVTGLAFSPDGRTL-YSSSSDESLAWWALRPEG 439

Query: 381 SQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                R++     L     SP+GR L  +     D   KL+ 
Sbjct: 440 VGLLRRVMAHARGLYGLALSPNGRLLATASH---DQTLKLWD 478



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 60/176 (34%), Gaps = 10/176 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + + D           + +  +    FSP+ + +  ++ D+      + +   
Sbjct: 381 TGGRDRLIRLWDWRQGRKVLEFRAHESHVTGLAFSPDGRTLYSSSSDESLAW--WALRPE 438

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +R+      +     S NG+    +   D+ + ++  D QS    R+        
Sbjct: 439 GVGLLRRVMAHARGLYGLALSPNGRLLA-TASHDQTLKLW--DAQSGKLLRVLEGHTEAA 495

Query: 306 SA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            A ++SPD  ++       G ++   + S      + +       +   W+P G L
Sbjct: 496 QALAFSPDGQRLASV----GWDKTLRLWSVQGPLLQTTSGFVRPLYAVAWAPDGRL 547



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/329 (12%), Positives = 101/329 (30%), Gaps = 85/329 (25%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H       ++++G      +       +++S     +L + +     ++ +       ++
Sbjct: 29  HQADGRFLRTLSGHSDTVRALDFAADGTLLSASSDTTLRLWNPQSGLLKGVLQGHRDQVW 88

Query: 216 EPRFSPNQQKVAYAT-------------------------------------YDDEDILR 238
             R SP+ ++V   +                                     +       
Sbjct: 89  SARISPDGRQVLSGSADGELRLWSVPALGLSRSIYAGRGWIYSVGLSPLNPVWAAGGQDG 148

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V L + +       +G+    + A  +  +G+  L +  +D  + ++S   +    ++ +
Sbjct: 149 VLLWNPQSGHRLPLLGSL--SVRALAWGPDGQ--LATGDRDGQIQLWS--AEGRYVQQWS 202

Query: 299 NTLFINISASY---------SPDSSQIVFESDR-------------------------EG 324
                  +  +           D   I +++ R                         +G
Sbjct: 203 AHRLAVSALVWRKRAQLISGGQDGQIIFWDTGRPQKTLQTASVLALAVGESRLLSGHDDG 262

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + +L+ +        R  +   AS     +SP G L+A   + G    + +  + G    
Sbjct: 263 RARLWSLD---GGLLRTLEPPAASVSALAYSPDGRLLASGGWDG---EVWLWNRQGQPIH 316

Query: 385 LLVEDSN-LQAPTWSPSGRSLIFSRKKDG 412
            L E +  + A  +SP G+ L  +  +DG
Sbjct: 317 RLSEAALEITALAFSPDGQYLA-AGSRDG 344


>gi|119488669|ref|ZP_01621678.1| WD-repeat protein [Lyngbya sp. PCC 8106]
 gi|119455092|gb|EAW36233.1| WD-repeat protein [Lyngbya sp. PCC 8106]
          Length = 1162

 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 99/267 (37%), Gaps = 26/267 (9%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++ S     ++ +   DG+ +R  +  R   + E  FSPN Q +A  + D      + L
Sbjct: 857  QTIASASKDGTIKLWSTDGSLLRTFSGHR-TTVKEIAFSPNGQMIASPSEDG----TIKL 911

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
              T      +     +  + +  FS +G +A  S   DE + ++ ++        L    
Sbjct: 912  WSTD-GSLLRTFSGHQKDVNSVSFSKDG-QAFASASSDETIKLWKLNG-----HLLVTFK 964

Query: 302  FINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                S   A +S D   ++  S       + +   NG   K +    E   F+   SP  
Sbjct: 965  GHQTSVNDAIFSSDGKTLISASS---DGIIKIWNLNGQLLKTL-FGHEEHIFNLSASPH- 1019

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            D I  +  S     I     DG+  + L   +S++ +  +SP G+ +        D   K
Sbjct: 1020 DPIFTSASSDNTLKIW--NNDGTLIKTLKGHNSSVWSGNFSPDGQFIA---STSADKTIK 1074

Query: 418  LYSIDLNGRNETLINTPAYASDPQWVG 444
            ++S+D         N+ A   D  +  
Sbjct: 1075 IWSLDGTQLKSIQDNSFADWGDASFSP 1101



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 109/286 (38%), Gaps = 37/286 (12%)

Query: 172 DFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           D+ S + F  +S   VSG   +++ + +R+G  ++ L+   D I +   FS + Q +A A
Sbjct: 716 DWVSSLTFSRDSQMLVSGSSDSTVKLWNRNGTLLKTLSGHTDTI-WSINFSFDDQTLASA 774

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYS 286
           + D+              R   ++   +     +    FS + +  + S   D+ +  + 
Sbjct: 775 SSDN--------TIILWHRDGTQLTTLKGHTDRVTNLSFSPDNQTIV-SASLDKTIRFWK 825

Query: 287 VD-----LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            D           + + +   I  +  +      I   S ++G  +L+          R 
Sbjct: 826 YDNPLLKTLGGENKNIGHQNQI-TTVIFDSTGQTIASAS-KDGTIKLWSTD---GSLLRT 880

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPS 400
                 +  +  +SP G +IA     G    I +   DGS  R       ++ + ++S  
Sbjct: 881 FSGHRTTVKEIAFSPNGQMIASPSEDGT---IKLWSTDGSLLRTFSGHQKDVNSVSFSKD 937

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN-----GRNETLINTPAYASDPQ 441
           G+   F+     D   KL+ ++ +       ++T +N   ++SD +
Sbjct: 938 GQ--AFASASS-DETIKLWKLNGHLLVTFKGHQTSVNDAIFSSDGK 980



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 98/294 (33%), Gaps = 61/294 (20%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
              F ++ + S     ++ + +++G  ++ L    +  ++E  FSP+ + +A    D++ 
Sbjct: 640 SFSFNNQMIASSSYDKTVKLWNQNGKLLKTL-EGHEDAVYEVSFSPDGEILASGGADNK- 697

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              + L D    +  K +   +  + +  FS +  + L+S   D  + ++  +      +
Sbjct: 698 ---IRLWDIN-GKLLKVLDGHQDWVSSLTFSRD-SQMLVSGSSDSTVKLW--NRNGTLLK 750

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L+       S ++S D   +   S       + +   +G+    + +       +  +S
Sbjct: 751 TLSGHTDTIWSINFSFDDQTLASASS---DNTIILWHRDGTQLTTL-KGHTDRVTNLSFS 806

Query: 356 PQGDLIAFTKFS-----------------GEKFAIG------------------------ 374
           P    I                       GE   IG                        
Sbjct: 807 PDNQTIVSASLDKTIRFWKYDNPLLKTLGGENKNIGHQNQITTVIFDSTGQTIASASKDG 866

Query: 375 ---VMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +   DGS  R      + ++   +SP+G+ +        D   KL+S D +
Sbjct: 867 TIKLWSTDGSLLRTFSGHRTTVKEIAFSPNGQMIA---SPSEDGTIKLWSTDGS 917



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 80/254 (31%), Gaps = 55/254 (21%)

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
               T ++  F+     ++     G IK    +   DG+ +R  +  +  +     FS + 
Sbjct: 884  HRTTVKEIAFSPNGQMIASPSEDGTIK----LWSTDGSLLRTFSGHQKDVNSV-SFSKDG 938

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            Q  A A+ D+     + L            G+  S+  A  FSS+GK   IS   D  + 
Sbjct: 939  QAFASASSDE----TIKLWKLNGHLLVTFKGHQTSVNDA-IFSSDGKTL-ISASSDGIIK 992

Query: 284  IYSVDL---------------------------------------QSNATERLTNTLFIN 304
            I++++                                             + L       
Sbjct: 993  IWNLNGQLLKTLFGHEEHIFNLSASPHDPIFTSASSDNTLKIWNNDGTLIKTLKGHNSSV 1052

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++SPD   I   S     + + +   +G+  K I  +  A + D  +SP   +I   
Sbjct: 1053 WSGNFSPDGQFIASTS---ADKTIKIWSLDGTQLKSIQDNSFADWGDASFSPNVQMIV-- 1107

Query: 365  KFSGEKFAIGVMKK 378
              S     +  +  
Sbjct: 1108 SASDNTVKLWKLDL 1121



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 72/195 (36%), Gaps = 18/195 (9%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y+  T  D       N    I+    S +G+    S   D ++ ++S +      + +  
Sbjct: 536 YIQQTIRDIKEYNRLNSEGWIV--TVSPDGQTIA-STGADNSVILWSKN--GKLLKIIEG 590

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                +   +SPD   +   S       + +   +G+  K+I+        D  +S    
Sbjct: 591 HKDNIVKLKFSPDGEILASASK---DNTIILWTPDGNFIKKIT-GHSKEVTDISFSFNNQ 646

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +IA + +      + +  ++G   + L   +  +   ++SP G  L       G   +K+
Sbjct: 647 MIASSSYDKT---VKLWNQNGKLLKTLEGHEDAVYEVSFSPDGEILA-----SGGADNKI 698

Query: 419 YSIDLNGRNETLINT 433
              D+NG+   +++ 
Sbjct: 699 RLWDINGKLLKVLDG 713



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 95/264 (35%), Gaps = 48/264 (18%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-------- 233
           +++ S    NS+ +  ++G  ++ +   +D I+   +FSP+ + +A A+ D+        
Sbjct: 564 QTIASTGADNSVILWSKNGKLLKIIEGHKDNIVKL-KFSPDGEILASASKDNTIILWTPD 622

Query: 234 EDILRVYLMDTR-------------------------IDRAPKRIGNFRSM---ILAPRF 265
            + ++     ++                          ++  K +         +    F
Sbjct: 623 GNFIKKITGHSKEVTDISFSFNNQMIASSSYDKTVKLWNQNGKLLKTLEGHEDAVYEVSF 682

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G   L S   D  + ++  D+     + L        S ++S DS  +V  S     
Sbjct: 683 SPDG-EILASGGADNKIRLW--DINGKLLKVLDGHQDWVSSLTFSRDSQMLVSGSS---D 736

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +   NG+  K +S   +  +    +S     +A          I +  +DG+Q   
Sbjct: 737 STVKLWNRNGTLLKTLSGHTDTIW-SINFSFDDQTLASASSDNT---IILWHRDGTQLTT 792

Query: 386 LV-EDSNLQAPTWSPSGRSLIFSR 408
           L      +   ++SP  ++++ + 
Sbjct: 793 LKGHTDRVTNLSFSPDNQTIVSAS 816


>gi|154310178|ref|XP_001554421.1| hypothetical protein BC1G_07009 [Botryotinia fuckeliana B05.10]
 gi|150851570|gb|EDN26763.1| hypothetical protein BC1G_07009 [Botryotinia fuckeliana B05.10]
          Length = 1065

 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 85/263 (32%), Gaps = 19/263 (7%)

Query: 172 DFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           D+ + + F ++S    S     ++ + D     ++         +    FS + + +A A
Sbjct: 737 DWVNAVAFSADSKLLASASRDRTIKIWDSATGTLQQTLEEHSDWVNSVAFSADSKLLASA 796

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D      + + +       + +      + +  FS++ K    S   D  + I+    
Sbjct: 797 SRDR----TIKIWNAATGTLQQTLEGHSDWVNSVAFSADSKLLA-SASDDHTIKIWD-SA 850

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                + L        S ++S DS  +   S R+    + +  S     ++  +      
Sbjct: 851 TDTLLQTLEGHSDWVRSIAFSTDSKLLASWS-RDHT--IKIWDSATGTLQQTLEGHNGEV 907

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFS 407
               +S    L+A          I +        +  +E     + +  +S   + L  +
Sbjct: 908 NSVAFSADSKLLASASDDRT---IKIWDSATGTLQQTLEGHSGGVNSVAFSADSKLLASA 964

Query: 408 RKKDGDTGSKLYSIDLNGRNETL 430
            +   D   K++        +TL
Sbjct: 965 SR---DRTIKIWDAATGTLQQTL 984



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 45/139 (32%), Gaps = 11/139 (7%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            + L        S ++S DS  +   S R+    + +  S     ++  +          
Sbjct: 687 LQTLEGHSGGVNSIAFSADSKLLASAS-RDHT--IKIWDSATGTLQQTLEGNSDWVNAVA 743

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKD 411
           +S    L+A          I +        +  +E+ +    +  +S   + L  + +  
Sbjct: 744 FSADSKLLASASRDRT---IKIWDSATGTLQQTLEEHSDWVNSVAFSADSKLLASASR-- 798

Query: 412 GDTGSKLYSIDLNGRNETL 430
            D   K+++       +TL
Sbjct: 799 -DRTIKIWNAATGTLQQTL 816


>gi|301308391|ref|ZP_07214345.1| putative Cytochrome c binding protein [Bacteroides sp. 20_3]
 gi|300833861|gb|EFK64477.1| putative Cytochrome c binding protein [Bacteroides sp. 20_3]
          Length = 490

 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 56/339 (16%), Positives = 112/339 (33%), Gaps = 77/339 (22%)

Query: 144 FFSSPASWRKIAHTIS----DDIYQSITGEKGDFNSR-ILFVSESVVSGIIKNSLC---- 194
           F    + W+++  T S    +   Q+   ++    +  I+ V++  V G +   L     
Sbjct: 85  FVIPASGWKRLLRTASGNHLNVTVQAFVNDEWIAYAPFIIKVAKEPVDGWLAYRLIEPGY 144

Query: 195 -VMDRDGANIRYLTPSRDQILFEPRFSPNQ--QKVAYATYDDEDIL---------RVYLM 242
            + +R G   R L    +  + E + S N      ++   + E +L          + + 
Sbjct: 145 ELWNRMGIYQRNLENYTENAIIENKMSGNNCMNCHSFCMQNPEKMLFHMRETYSCTLLID 204

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------------DEAMDIYS 286
             R+++   +     S ++ P +  +GK    SV K                D A D+  
Sbjct: 205 GDRVEKLNTKTDQTLSPLVYPSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDSASDVVV 264

Query: 287 VDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK---- 339
            D Q +       L++        ++SPD + + F S      ++  M       +    
Sbjct: 265 YDTQKHEIVTSPLLSSEGAFETFPTFSPDGNTLYFCS-----AKVRTMPKEYDQVRYDLC 319

Query: 340 RISQDKEASYFD------------------PVWSPQGDLIAFTKFSGEKFAIGVMKKD-- 379
            +S D     F                   P  SP G  + +T      F+I     D  
Sbjct: 320 SVSFDPATRRFGTVVDTLYKASEIDKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLY 379

Query: 380 -------GSQERLLVEDSNLQAP-TWSPSGRSLIFSRKK 410
                   S         ++++  +WS   R ++FS ++
Sbjct: 380 MIDLSTLRSYPLEAANSDDVESYHSWSSDSRWIVFSSRR 418


>gi|299752644|ref|XP_001841141.2| HNWD1 [Coprinopsis cinerea okayama7#130]
 gi|298409933|gb|EAU80678.2| HNWD1 [Coprinopsis cinerea okayama7#130]
          Length = 1709

 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 77/399 (19%), Positives = 125/399 (31%), Gaps = 88/399 (22%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
                    KI    +      ++S GA      R+     DR+    R+WDV   + +  
Sbjct: 1118 TDPQHGPVKILEHPAPVNTLAFSSHGA------RLASGSSDRIV---RVWDVASGEVL-- 1166

Query: 142  KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
                      R   HT  + I   +              S S    I    L      GA
Sbjct: 1167 ---------NRFEGHT--NSINCVVFSP-----DETTIASASEDETIRLWDLVTNSPIGA 1210

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
                        +    FS + +++    YD      + L +        +     + + 
Sbjct: 1211 ----PLEGHTDAVTSIAFSQDGRRLISGAYDG----ILLLWEVSTGAIVGQFTGHWNGVT 1262

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQS---NATER-----LTNTLFINI------SA 307
            +  FS +GKR L S   DE + ++  ++ +    + +      LT  L I        S 
Sbjct: 1263 SVAFSPDGKRVL-SGSCDETIAVWDAEVATESDGSEKEDSEYSLTPFLDIPAHQDNVKSI 1321

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-----DKEASYFDP---------- 352
            S+SPD   I   SD    E L V  +    Q  I       D    Y  P          
Sbjct: 1322 SFSPDGRYIASGSD---DETLRVWDAETGIQLPIGFHRDDLDGHHWYRFPLPPTHKHAVE 1378

Query: 353  --VWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSL 404
               +SP G L+A    +G  +    + +   +  +  + V       + +  W P    L
Sbjct: 1379 VVSYSPDGQLMA----TGGGYNDETLCIWNSETGKLHIPVLRGHAGGITSLVWFPDSTRL 1434

Query: 405  IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              S     D   ++++I   G  ET +  P YA    WV
Sbjct: 1435 ASSSY---DATVRIWNI---GTGET-VAGP-YAPHTSWV 1465



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/345 (15%), Positives = 104/345 (30%), Gaps = 62/345 (17%)

Query: 128  FRLWDVKD----RKQIIGKKFFSSP----ASWRKIAHTISDDIYQ----SITGEKGDFN- 174
             RLWD+         + G     +        R++     D I      S     G F  
Sbjct: 1197 IRLWDLVTNSPIGAPLEGHTDAVTSIAFSQDGRRLISGAYDGILLLWEVSTGAIVGQFTG 1256

Query: 175  -----SRILFVSE--SVVSGIIKNSLCVMDR------DGANIRYLTPSRDQILFEPR--- 218
                 + + F  +   V+SG    ++ V D       DG+       S    L  P    
Sbjct: 1257 HWNGVTSVAFSPDGKRVLSGSCDETIAVWDAEVATESDGSEKEDSEYSLTPFLDIPAHQD 1316

Query: 219  ------FSPNQQKVAYATYDDE----------DILRVYLMDTRIDRAPKRIGNFRSMILA 262
                  FSP+ + +A  + D+            +   +  D        R     +   A
Sbjct: 1317 NVKSISFSPDGRYIASGSDDETLRVWDAETGIQLPIGFHRDDLDGHHWYRFPLPPTHKHA 1376

Query: 263  P---RFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIV 317
                 +S +G+        ++   +   + ++       L        S  + PDS+++ 
Sbjct: 1377 VEVVSYSPDGQLMATGGGYNDET-LCIWNSETGKLHIPVLRGHAGGITSLVWFPDSTRLA 1435

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              S  +   +++ + + G           +       +  G  +A         +I VM 
Sbjct: 1436 -SSSYDATVRIWNIGT-GETVAGPYAPHTSWVTSLAITADGTRLASASRD---HSIQVMD 1490

Query: 378  KDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             +      E LL    ++    +SP GR L  +     D   +L+
Sbjct: 1491 AETLEPVGEPLLGHGGSVNCVIFSPDGRFLASASN---DRTIRLW 1532



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 63/192 (32%), Gaps = 11/192 (5%)

Query: 219  FSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            F+P+   VA  Y  Y    I           R    +      + +  FS +GK  ++S 
Sbjct: 962  FAPSNSLVARQYLPYFPRTIRITRGRCVDWPRIVFSVDEHDDAVNSVAFSRDGK-LIVSA 1020

Query: 277  QKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
              D+ + ++  D ++   +   L        +A +SPD   +V  SD      + V  ++
Sbjct: 1021 SNDKTVRVW--DAETGDPKSGPLEGHEGYVTTAVFSPDGRLVVSGSD---DYTIRVWDAD 1075

Query: 335  -GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             G +                + P+G  IA   +                 ++L   + + 
Sbjct: 1076 SGEEVAGPLSGHRNVISSIAFCPKGIYIASASYDNTIHLRLATDPQHGPVKILEHPAPVN 1135

Query: 394  APTWSPSGRSLI 405
               +S  G  L 
Sbjct: 1136 TLAFSSHGARLA 1147



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 76/223 (34%), Gaps = 10/223 (4%)

Query: 185  VSGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VS     ++ V D +  + +       +  +    FSP+ + V   + D    +RV+  D
Sbjct: 1018 VSASNDKTVRVWDAETGDPKSGPLEGHEGYVTTAVFSPDGRLVVSGSDDY--TIRVWDAD 1075

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            +  + A   +   R++I +  F   G     +   +      + D Q    + L +   +
Sbjct: 1076 SGEEVAG-PLSGHRNVISSIAFCPKGIYIASASYDNTIHLRLATDPQHGPVKILEHPAPV 1134

Query: 304  NISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N  A +S   +++    SDR     + V      +     +    S    V+SP    IA
Sbjct: 1135 NTLA-FSSHGARLASGSSDR----IVRVWDVASGEVLNRFEGHTNSINCVVFSPDETTIA 1189

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                        ++        L      + +  +S  GR LI
Sbjct: 1190 SASEDETIRLWDLVTNSPIGAPLEGHTDAVTSIAFSQDGRRLI 1232


>gi|312195358|ref|YP_004015419.1| hypothetical protein FraEuI1c_1487 [Frankia sp. EuI1c]
 gi|311226694|gb|ADP79549.1| WD40 repeat, subgroup [Frankia sp. EuI1c]
          Length = 531

 Score = 70.8 bits (172), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 46/214 (21%), Positives = 82/214 (38%), Gaps = 24/214 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR----SMILAPRFSSNGKRAL 273
            FSP+ + +A  + D      V L D R    P  I         ++ A  FS +G    
Sbjct: 321 AFSPDGRTLATGSVD----AIVRLWDLRNPAQPSPIATLPTRHTGVVGALAFSPDGHALA 376

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +   DE++ I+ VD        L+       + +YSPD   +VF  +R   + + +   
Sbjct: 377 -TASSDESVLIWDVDRPGRLFAELSGVNAAMWAIAYSPDGRTLVFGGER---QSVIIWNV 432

Query: 334 NGSDQKRISQDKEASYFDP----VWSPQGDLIAFTKFSGEKFAIGV----MKKDGSQERL 385
             + + R    +  S+ +     V+SP G ++ FT    +   I      ++     + +
Sbjct: 433 EDARRPRKIAARLGSHAEGVRSLVFSPDGSML-FTGSVNQTVRIWDVANPVRPSLIDDLV 491

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                 + A  +SP GR L        DT  +L+
Sbjct: 492 TAHTGIVNAMAFSPDGRKLA---TGSSDTTVQLW 522



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 73/201 (36%), Gaps = 13/201 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A  + D            R   +   + +    + A  F   G  A I   
Sbjct: 231 SFSPDGKILATGSSDTTVRFWDVTDSARSGESTTLLTDHTGGVSAGVF---GSYAQIFAT 287

Query: 278 KDEAMDIYSVDLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGKEQLY--VM 331
               + ++++     A + +T     +L    + ++SPD   +      +   +L+    
Sbjct: 288 CGGDVRLWNM-TNPAAPQLITALPRPSLGAVRTLAFSPDGRTLA-TGSVDAIVRLWDLRN 345

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DS 390
            +  S    +            +SP G  +A T  S E   I  + + G     L   ++
Sbjct: 346 PAQPSPIATLPTRHTGVVGALAFSPDGHALA-TASSDESVLIWDVDRPGRLFAELSGVNA 404

Query: 391 NLQAPTWSPSGRSLIFSRKKD 411
            + A  +SP GR+L+F  ++ 
Sbjct: 405 AMWAIAYSPDGRTLVFGGERQ 425



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/228 (13%), Positives = 70/228 (30%), Gaps = 22/228 (9%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP----- 208
           + +  +  +  ++          + F  +            V   D  N    +P     
Sbjct: 297 MTNPAAPQLITALPRPSLGAVRTLAFSPDGRTLATGSVDAIVRLWDLRNPAQPSPIATLP 356

Query: 209 -SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                ++    FSP+   +A A+ D+     +     R  R    +    + + A  +S 
Sbjct: 357 TRHTGVVGALAFSPDGHALATASSDES---VLIWDVDRPGRLFAELSGVNAAMWAIAYSP 413

Query: 268 NGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           +G+  +   ++   +     D +       RL +      S  +SPD S ++F       
Sbjct: 414 DGRTLVFGGERQSVIIWNVEDARRPRKIAARLGSHAEGVRSLVFSPDGS-MLFTGSVNQT 472

Query: 326 EQLYVMQSNGSDQKR------ISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +++    + ++  R      +            +SP G  +A     
Sbjct: 473 VRIW----DVANPVRPSLIDDLVTAHTGIVNAMAFSPDGRKLATGSSD 516



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 56/147 (38%), Gaps = 10/147 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  +DR G  +       +  ++   +SP+ + + +       I+       R  +   R
Sbjct: 386 IWDVDRPG-RLFAELSGVNAAMWAIAYSPDGRTLVFGGERQSVIIWNVEDARRPRKIAAR 444

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISA 307
           +G+    + +  FS +G     +   ++ + I+  D+ +     L     T    I  + 
Sbjct: 445 LGSHAEGVRSLVFSPDGSML-FTGSVNQTVRIW--DVANPVRPSLIDDLVTAHTGIVNAM 501

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++SPD  ++      +   QL+  + +
Sbjct: 502 AFSPDGRKLA-TGSSDTTVQLWQTRPS 527



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 67/223 (30%), Gaps = 29/223 (13%)

Query: 216 EPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            P +S    P +  +   +    D            R  + +           FS +GK 
Sbjct: 189 NPTWSVPAPPRRSNLNRGSRSLPDPRPAGAPLLGHTRGVRSV----------SFSPDGK- 237

Query: 272 ALISVQKDEAMDIYSVD---LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            L +   D  +  + V        +T  LT+      +  +   +          G  +L
Sbjct: 238 ILATGSSDTTVRFWDVTDSARSGESTTLLTDHTGGVSAGVFGSYAQIFATC---GGDVRL 294

Query: 329 YVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQER 384
           + M +  + Q    + +    +     +SP G  +A          + +    +      
Sbjct: 295 WNMTNPAAPQLITALPRPSLGAVRTLAFSPDGRTLATGSVDAIVRLWDLRNPAQPSPIAT 354

Query: 385 LLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           L       + A  +SP G +L  +     D    ++ +D  GR
Sbjct: 355 LPTRHTGVVGALAFSPDGHALATASS---DESVLIWDVDRPGR 394


>gi|284035402|ref|YP_003385332.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
 gi|283814695|gb|ADB36533.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
          Length = 638

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 69/175 (39%), Gaps = 12/175 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS-NATERLT--NTLFINISASYSPDSSQIVFESDR 322
           S + K  L +  +D   ++Y +        ++LT   T  I +   Y PD  +I++ SD+
Sbjct: 53  SPDEKTVLFTSNQDGVFNLYEIPFDGSGQPKQLTKSTTNAIYVLG-YLPDG-RILYSSDQ 110

Query: 323 EGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKK 378
            G E   +Y+ + +G+    ++  ++A +     S       +      +  F +  M  
Sbjct: 111 GGNELSHIYLREKDGA-VSDLTPAEKAKFQFAGLSYDRKSFFYQSNQRNRAAFDVYEMDI 169

Query: 379 DGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              + +LL E+     P   SP  R +  ++     T   +Y  D   +   L+ 
Sbjct: 170 ATMKPKLLFENPGGFFPGDVSPDKRYIALAKTST-TTDGDVYLYDTKTKETRLLT 223



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 83/252 (32%), Gaps = 9/252 (3%)

Query: 193 LCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L  +  DG+   + LT S    ++   + P+  ++ Y++    + L    +  +      
Sbjct: 71  LYEIPFDGSGQPKQLTKSTTNAIYVLGYLPDG-RILYSSDQGGNELSHIYLREKDGAVSD 129

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASY 309
                ++       S + K       +    A D+Y +D+ +   + L            
Sbjct: 130 LTPAEKAKFQFAGLSYDRKSFFYQSNQRNRAAFDVYEMDIATMKPKLLFENPGGFFPGDV 189

Query: 310 SPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFS 367
           SPD   I         +  +Y+  +   + + ++  + + +     ++P G  +      
Sbjct: 190 SPDKRYIALAKTSTTTDGDVYLYDTKTKETRLLTKHEGDVNNGPEGFTPDGKKLLIRTDE 249

Query: 368 GEKFA-IGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G +FA +        Q  +L   + ++     S  G   I S   D  T  K+     N 
Sbjct: 250 GNEFAYVKAYDLASGQSTVLDKANWDISGDYLSYRGHYRILSVNNDARTELKIIDTRTN- 308

Query: 426 RNETLINTPAYA 437
           +   L   P   
Sbjct: 309 QPVKLPALPGGD 320



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 4/87 (4%)

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPT--WSPSGRSLI 405
           +     SP    + FT      F +  +  DG  Q + L + +        + P GR ++
Sbjct: 47  FGGSDISPDEKTVLFTSNQDGVFNLYEIPFDGSGQPKQLTKSTTNAIYVLGYLPDGR-IL 105

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +S  + G+  S +Y  + +G    L  
Sbjct: 106 YSSDQGGNELSHIYLREKDGAVSDLTP 132


>gi|226313365|ref|YP_002773259.1| hypothetical protein BBR47_37780 [Brevibacillus brevis NBRC 100599]
 gi|226096313|dbj|BAH44755.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 453

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 91/279 (32%), Gaps = 35/279 (12%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV--YLMDTRIDRAPKRIG 254
           D  G   +       QI+    +SP+ + + +  Y   D      Y+   R D +     
Sbjct: 64  DATGKIKQITKDGYAQIVG---WSPDGKWLLFVKYKGNDNYSTPGYVWIVRADGSKTVQV 120

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMD----IYSVDLQSNATERL-TNTLFINISASY 309
           + R++   P++S    +   +V           +   D+Q +    L + T       ++
Sbjct: 121 DERAVFETPKWSPKANKLAYTVNVGRNEAPRLLLIVKDVQEHGELALQSTTRADFEDFAW 180

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNG-----------SDQKRISQD-KEASYFDPVWSPQ 357
            PD   ++  S    K +   +               ++  R+ +     +      SP 
Sbjct: 181 MPDGENML-VSLPAEKNKPMTLALRTLAGKPLAAYPIAEPPRVEEGIYPWAATGLKVSPD 239

Query: 358 GDLIAF------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFS- 407
           G  +A+         S +   I         ++ +   + L  P    W+P+G  L F  
Sbjct: 240 GKAVAYFVRYNSGSLSADGVPIQWFDLTQPAKKPIDLGTGLAYPDWLAWTPNGEQLAFVD 299

Query: 408 -RKKDGDTGSKLYSIDLNGRNETLINTPAYASD-PQWVG 444
              +   T  +L   D  G+ +T+   P      P W+ 
Sbjct: 300 GTDRTATTNKQLKLADRAGKVKTVSPGPVVVDTYPVWIP 338



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 57/141 (40%), Gaps = 17/141 (12%)

Query: 315 QIVFESDREGKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-- 370
           ++ F S     + L+++         K+I++D  A      WSP G  + F K+ G    
Sbjct: 48  KMAFTS----NQHLFLVDGRDATGKIKQITKDGYAQIVG--WSPDGKWLLFVKYKGNDNY 101

Query: 371 ---FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI--DL-- 423
                + +++ DGS+   + E +  + P WSP    L ++     +   +L  I  D+  
Sbjct: 102 STPGYVWIVRADGSKTVQVDERAVFETPKWSPKANKLAYTVNVGRNEAPRLLLIVKDVQE 161

Query: 424 NGRNETLINTPAYASDPQWVG 444
           +G       T A   D  W+ 
Sbjct: 162 HGELALQSTTRADFEDFAWMP 182



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 99/288 (34%), Gaps = 40/288 (13%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T +     +++ +      +   +  L V D        L  +      +  + P+ + +
Sbjct: 128 TPKWSPKANKLAYTVNVGRNEAPRLLLIVKDVQEHGELALQSTTRADFEDFAWMPDGENM 187

Query: 227 AYATYDDEDILRVYLMDTRIDRA--------PKRI--GNFRSMILAPRFSSNGKRALI-- 274
             +   +++      + T   +         P R+  G +       + S +GK      
Sbjct: 188 LVSLPAEKNKPMTLALRTLAGKPLAAYPIAEPPRVEEGIYPWAATGLKVSPDGKAVAYFV 247

Query: 275 -----SVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSPDSSQIVFE--SDREG- 324
                S+  D     +  DL   +     L   L      +++P+  Q+ F   +DR   
Sbjct: 248 RYNSGSLSADGVPIQW-FDLTQPAKKPIDLGTGLAYPDWLAWTPNGEQLAFVDGTDRTAT 306

Query: 325 -KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL-IAFTKFSGEKFA---------- 372
             +QL +    G   K +S         PVW P+    + FT+    +++          
Sbjct: 307 TNKQLKLADRAG-KVKTVSPGPVVVDTYPVWIPKAPYTLLFTRGLATEYSYDPKKVMVPE 365

Query: 373 --IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGS 416
             I     DG+++++   ++N     P  SP G+ L+F R    + GS
Sbjct: 366 QGIWRRSADGAEQQVTKGEANTADYYPAPSPDGKQLLFLRLDRAEHGS 413


>gi|313839986|gb|EFS77700.1| peptidase, S41 family [Propionibacterium acnes HL086PA1]
          Length = 1086

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 74/227 (32%), Gaps = 35/227 (15%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 R+ N   M+  PRFS NG +   +    +  +++ +DL +    RLT       
Sbjct: 30  TGGRASRLTNDHVMVRNPRFSPNGTKIAWTCYLGQRPEVFVIDLATGDQRRLTWLGAARS 89

Query: 306 SASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 D   +VF S  +    G   LY +  +G  ++           D   S  G + 
Sbjct: 90  FVVGWQDDEHVVFSSPHQTNDVGLAWLYTVSLDGHVERL----GYGPGMDLAVSSDGAVA 145

Query: 362 AFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS------- 403
             T              G    I +      +   L+ + N     ++ +GR        
Sbjct: 146 VVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAGRYSVGWIDG 205

Query: 404 -LIFSRKKDGD----TGSKLYSIDLNGRNETLIN----TPAYASDPQ 441
            LIFS     D      ++++S+D  G +            Y  DP+
Sbjct: 206 RLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPR 252



 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 65/168 (38%), Gaps = 20/168 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G   + +   D    ++ V +      RLTN   +  +  +SP+ ++I +      
Sbjct: 9   PDVHGDLVVFTADDD----VWLVPVTGGRASRLTNDHVMVRNPRFSPNGTKIAWTCYLGQ 64

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDG 380
           + +++V+     DQ+R++    A  F   W    + + F+            +  +  DG
Sbjct: 65  RPEVFVIDLATGDQRRLTWLGAARSFVVGWQDD-EHVVFSSPHQTNDVGLAWLYTVSLDG 123

Query: 381 SQERL-------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
             ERL       L   S+      +P+ G    + R + G T ++++ 
Sbjct: 124 HVERLGYGPGMDLAVSSDGAVAVVTPNSGDCSRWKRYRGG-TAAQIWL 170



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 89/269 (33%), Gaps = 42/269 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++   G     LT     ++  PRFSPN  K+A+  Y       V+++D       +
Sbjct: 23  DVWLVPVTGGRASRLTNDH-VMVRNPRFSPNGTKIAWTCY-LGQRPEVFVIDLATGDQRR 80

Query: 252 RIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                 +      +  + +  + S            +Y+V L     ERL     +++  
Sbjct: 81  LTWLGAARSFVVGW-QDDEHVVFSSPHQTNDVGLAWLYTVSLD-GHVERLGYGPGMDL-- 136

Query: 308 SYSPDSSQIV----------FESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S D +  V          ++  R G   Q+++  +      R+ ++   ++     + 
Sbjct: 137 AVSSDGAVAVVTPNSGDCSRWKRYRGGTAAQIWLRPARAEKFLRLLREGNDNHDGYAAAG 196

Query: 357 -------QGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGR 402
                   G LI  +  S +     +  I  +   G   R        +     P   G 
Sbjct: 197 RYSVGWIDGRLIFSSDMSDDDCPQAQAQIWSVDGQGHDLRQHTHHGEAEGYVRDPRTDGT 256

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETL 430
           ++++       T   L+ +  L+   E L
Sbjct: 257 TIVY------HTHGALWRMTGLDAEPERL 279



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 271 RALISVQKDEAMDIYSVDLQS-NATERLTNT-LFINISASYSPDSSQIVFESDREGKEQL 328
           + + +   D    +   +L       R+    +   +  + +PD +++   S      ++
Sbjct: 351 QGVWASDVDGEDCLEVANLDGTGEIRRIAQGQIGRVLHIAPAPDGTKVALISH---DGRI 407

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKF--AIGVMKKDGSQE- 383
            ++       + I +  E       WSP    + +     +GE     I    + G  E 
Sbjct: 408 LIVTIADGAIREIGKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEP 467

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQ 441
             L     +   P ++  G+ L     +  D      + DL+ G  +     P  A++  
Sbjct: 468 FELTRGAFDDSCPVFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQRPWLVPLSATEA- 526

Query: 442 WVGF 445
              F
Sbjct: 527 -SPF 529



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                R+IA      I + +        +++  +S           L V   DGA IR +
Sbjct: 371 GTGEIRRIAQG---QIGRVLHIAPAPDGTKVALISHDG------RILIVTIADGA-IREI 420

Query: 207 TPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             S +       +SP+ + V +       +  I ++   D +    P  +         P
Sbjct: 421 GKSLEGEANGLAWSPDSRYVVWRSPMATGEAMIGQIRCWDEQGMGEPFELTRGAFDDSCP 480

Query: 264 RFSSNGKRALISVQK--DEAMDIYSVDLQSNATER 296
            F+++GK   +   +  D   D  + DL    T+R
Sbjct: 481 VFTADGKYLAMLSARTFDPNYDGQTFDLSFGHTQR 515


>gi|254409973|ref|ZP_05023753.1| Receptor family ligand binding region [Microcoleus chthonoplastes PCC
            7420]
 gi|196183009|gb|EDX77993.1| Receptor family ligand binding region [Microcoleus chthonoplastes PCC
            7420]
          Length = 2499

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 46/279 (16%), Positives = 108/279 (38%), Gaps = 26/279 (9%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK--VAYATYDDEDILRVY 240
            +V       +L   + D      +  + ++      FSP++++  +A A+  + +   V 
Sbjct: 1618 TVGKDGDTINLWDEESDQFQQLPIPKTDNETFTSVAFSPDEKRLAIASASAGENETGLVR 1677

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + D   +   ++    +  + +  FS    R L++   D  + ++  D+ SN   + + T
Sbjct: 1678 IWDITQNAIVEQFDTGQGQLYSVAFSPLDSRQLVTGGGDGTVKVW--DISSNRPAQFSTT 1735

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS----DQKRISQDKEASYFDPVWSP 356
                    +SP+   +   S+   +  L+ ++ +G+        I Q ++    +  +SP
Sbjct: 1736 QGTIQRMEFSPNQELLATISNNN-QLNLWNVREDGTVSLNPATEIVQQQQGGVKNVTFSP 1794

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             G+ +      G+   I +     +Q +    +   +Q+   SP+ R L        +  
Sbjct: 1795 DGETLIIV---GKDDTIKLWTISTNQIKSFATQQQQIQSLAASPNKRKLA---TIGSNGQ 1848

Query: 416  SKLYSIDLNGRN----------ETLINTPAYASDPQWVG 444
             KL+ I  +  N           T IN+ A++ D + + 
Sbjct: 1849 LKLWQIQNDTLNPIDISNSQLSRTQINSLAFSPDGKQLA 1887



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 18/212 (8%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SPN++K+A    + +  L     DT            R+ I +  FS +GK+      + 
Sbjct: 1834 SPNKRKLATIGSNGQLKLWQIQNDTLNPIDISNSQLSRTQINSLAFSPDGKQLA--TAQG 1891

Query: 280  EAMDIYSVD---LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              +++++V    L + + ++      I  S ++SP++ +I       G + L  +     
Sbjct: 1892 NILNLWTVSWGKLSNQSVDQFQTQQPIQ-SVAFSPNNKKIA----TAGNQGLLKLWDTKG 1946

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-- 394
            +       ++ S    V+SP  ++IA    +G    + +       E  L   S  QA  
Sbjct: 1947 NLLDQIPTQQTSITRLVFSPNSNIIATIGQNGT---LNLWDTSDKAEAKLSLISTHQAQG 2003

Query: 395  ---PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 +S  G+ L   R        ++ ++D 
Sbjct: 2004 VANVAFSQDGKFLAIGRNNGSIELRQIGNVDA 2035



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 72/254 (28%), Gaps = 61/254 (24%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+ + +A    DD     V   +  + +   R       I +  FS  G    + +  
Sbjct: 1435 FSPDGKTLATIAGDD----TVKFWNN-LGQQTARFKTDAGDIKSIAFSPEGN---LWLTS 1486

Query: 279  DEAMDIYSVDLQSNATERLT-----------NTLFINISASYSPDSSQ-IVFESDREGKE 326
             E  +I   D+     + ++           N    N  +S +P +     F    +G E
Sbjct: 1487 GENNEISIRDISGEEIDTISLPDMPVCDEKNNNTDKNTESSSNPITQVVFAFIDTNDGTE 1546

Query: 327  ---------------QLYVMQSNGSDQKRISQDKEASYFDP------------------- 352
                              +M        R     E  +                      
Sbjct: 1547 PDEDNWRYNQLEDDEYAGMMTIFEDGTTRFFPLHEGDFKKTSSGKHCTEPFPKDLGLIKQ 1606

Query: 353  -VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFS 407
               SP G+ +      G+   +    ++  Q + L     ++    +  +SP  + L  +
Sbjct: 1607 LASSPDGEHLVTVGKDGDTINLW--DEESDQFQQLPIPKTDNETFTSVAFSPDEKRLAIA 1664

Query: 408  RKKDGDTGSKLYSI 421
                G+  + L  I
Sbjct: 1665 SASAGENETGLVRI 1678



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 29/163 (17%)

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             FS N K  + +V ++  + ++  D+  N             S +++PD       S  +
Sbjct: 1289 AFSPN-KNIIATVGQNNTVRLW--DILGNKLGEFPTDKRNVYSLAFTPDGKLA--TSGDQ 1343

Query: 324  GKEQLYVMQSNGSDQKRISQDKE------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            G  +L+ +Q+NG      SQ  E         +D  +S     +A     GE  AI +  
Sbjct: 1344 GTIKLWTIQNNGRTATLASQVPEEIKTEQNILYDIAFSEDKKWLATI---GEDSAIRLHD 1400

Query: 378  KDG-SQERLLVEDSNLQAP--------------TWSPSGRSLI 405
            +   S  + + + S ++ P               +SP G++L 
Sbjct: 1401 RSLPSPIKRIWDKSIVEIPPIEASNQTITATSAVFSPDGKTLA 1443



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 74/208 (35%), Gaps = 26/208 (12%)

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD---TR 245
              N++ + D  G N     P+  + ++   F+P+ +           +  +       T 
Sbjct: 1302 QNNTVRLWDILG-NKLGEFPTDKRNVYSLAFTPDGKLATSGDQGTIKLWTIQNNGRTATL 1360

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-------- 297
              + P+ I   ++++    FS + K    ++ +D A+ ++   L S   +R+        
Sbjct: 1361 ASQVPEEIKTEQNILYDIAFSEDKKWLA-TIGEDSAIRLHDRSLPS-PIKRIWDKSIVEI 1418

Query: 298  -----TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                 +N      SA +SPD   +       G + +    + G    R   D        
Sbjct: 1419 PPIEASNQTITATSAVFSPDGKTLA---TIAGDDTVKFWNNLGQQTARFKTDA-GDIKSI 1474

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +SP+G+L      SGE   I +    G
Sbjct: 1475 AFSPEGNL---WLTSGENNEISIRDISG 1499


>gi|120599022|ref|YP_963596.1| peptidase S9 prolyl oligopeptidase [Shewanella sp. W3-18-1]
 gi|120559115|gb|ABM25042.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sp. W3-18-1]
          Length = 687

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 88/292 (30%), Gaps = 69/292 (23%)

Query: 218 RFSPNQQKVAY----ATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             S +  K+ Y         E    +YL+D T+ +  P ++ +         F+++ K  
Sbjct: 46  TVSHDGTKLVYGLKTVNEKGEASSDLYLLDLTQANAKPLQLTSAAGTEHDVSFANDDKSI 105

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------------- 317
                ++ +  ++ + L      ++++      S   S D  QIV               
Sbjct: 106 YFLASRNGSSQLFQLPLTGGEAVQVSDLPLDIDSYKLSNDGKQIVLSMRVFPECKDLACS 165

Query: 318 ---FESDREGK----------------------EQLYVMQSNGSDQKRISQDKEASYFDP 352
              F ++ E K                        L+V   NG    ++    +    + 
Sbjct: 166 KDKFTAESERKSTGREYKQLMVRHWDTWEDHARNHLFVGALNGEKLTKVVDITQGLDTET 225

Query: 353 -----------VWSPQGDLIAFTKFSG-------EKFAIGVMKKDGSQERLLVEDSNLQA 394
                       ++P G  + ++  +          + +  +   G     L +D+    
Sbjct: 226 PPKPFSGMEEVTFTPDGKYVVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWD 285

Query: 395 --PTWSPSGRSLIFSRKKDGDTGSKLYSI---DLNGRNETLINTPAYASDPQ 441
             PT+S  GR + +   K     +  Y I   D N      +  P +   P 
Sbjct: 286 AQPTFSSDGRYMAYLAMKKPGFEADRYGIMLRDTNTGQSKEVA-PLWDRSPS 336



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/336 (13%), Positives = 107/336 (31%), Gaps = 78/336 (23%)

Query: 175 SRILFVSESVV-SGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
           +++++  ++V   G   + L ++D   AN + L   S      +  F+ + + + +    
Sbjct: 52  TKLVYGLKTVNEKGEASSDLYLLDLTQANAKPLQLTSAAGTEHDVSFANDDKSIYFLASR 111

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------- 277
           +                  ++ +    I + + S++GK+ ++S++               
Sbjct: 112 NGS--SQLFQLPLTGGEAVQVSDLPLDIDSYKLSNDGKQIVLSMRVFPECKDLACSKDKF 169

Query: 278 -------------------------KDEAMDIYSVDLQSNATER---LTNTLFINISA-- 307
                                          ++   L      +   +T  L        
Sbjct: 170 TAESERKSTGREYKQLMVRHWDTWEDHARNHLFVGALNGEKLTKVVDITQGLDTETPPKP 229

Query: 308 -------SYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQKRISQDKEASYFDPV 353
                  +++PD   +V+ +    K+Q +    +       G     +++D  A    P 
Sbjct: 230 FSGMEEVTFTPDGKYVVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPT 289

Query: 354 WSPQGDLIAFTKFSGEKFA---IGVMKKDGSQER-LLVEDSNLQAPT---WSPSGRSLIF 406
           +S  G  +A+       F     G+M +D +  +   V     ++P+   + P  R+L  
Sbjct: 290 FSSDGRYMAYLAMKKPGFEADRYGIMLRDTNTGQSKEVAPLWDRSPSSLMFGPDNRTLYV 349

Query: 407 SRKKDGDTG--------SKLYSIDLNGRNETLINTP 434
           + +  G             + SI  +G N  +  T 
Sbjct: 350 TAQDMGQVSIFQINTQFGDVQSIYSDGTNSLIAVTN 385



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 63/184 (34%), Gaps = 8/184 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G +            +      L  +   G     LT        +P FS + 
Sbjct: 235 EVTFTPDGKYVVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPTFSSDG 294

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D   + L DT   ++ +    +     +  F  + +   ++ Q  
Sbjct: 295 RYMAYLAMKKPGFEADRYGIMLRDTNTGQSKEVAPLWDRSPSSLMFGPDNRTLYVTAQDM 354

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
             + I+ ++ Q    + +        ++  +  + Q++F+S    +   LY + ++G   
Sbjct: 355 GQVSIFQINTQFGDVQSI---YSDGTNSLIAVTNDQLIFDSKTLVEPGDLYSITTDGQGL 411

Query: 339 KRIS 342
           KR++
Sbjct: 412 KRLT 415


>gi|300864329|ref|ZP_07109204.1| Serine/threonine protein kinase with WD40 repeats [Oscillatoria sp.
           PCC 6506]
 gi|300337674|emb|CBN54350.1| Serine/threonine protein kinase with WD40 repeats [Oscillatoria sp.
           PCC 6506]
          Length = 689

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 79/246 (32%), Gaps = 18/246 (7%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
              +  +K      I   + ++VSG    ++ + +                +     S +
Sbjct: 445 INGVHSKKWVRTLTIAPDNRTLVSGGDDKNISMWNLKTGKAIRTMSGHKGGVNAIAISRD 504

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            Q +A  + D      V L + +       +   R+ + A  FS +G+  + S   D+ +
Sbjct: 505 GQTLASGSDDK----TVCLWNLKTGSRMLTLSGHRAQVNALAFSRDGQTLV-SGSDDKTV 559

Query: 283 DIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++  + ++    + LT       + +  PD   +   S       + +         R 
Sbjct: 560 RLW--NFKAGQLRKVLTGHAGAVKAVAIGPDGQTLASSSS---DNTIRIWNLKEGKHTRT 614

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSP 399
                +       SP G  +           I V      +E+  ++     + A   +P
Sbjct: 615 LDGHSSWVRTLAISPDGKTLV-----SGGAKILVWDLKNGKEKTALQGHSRFVSAIAIAP 669

Query: 400 SGRSLI 405
            G+++I
Sbjct: 670 DGKTII 675



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 21/184 (11%), Positives = 55/184 (29%), Gaps = 13/184 (7%)

Query: 227 AYATYDDEDILRVYLM--DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            Y++           +       +  ++  +    + A   S +G+             I
Sbjct: 376 VYSSMRYGFFANPVWLLSSLPSSQFLEKSFSDVGNVNAIALSPDGQTLA----SGSFGTI 431

Query: 285 YSVDLQSNATERLTNT---LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
              ++++    R  N         + + +PD+  +V   D    + + +         R 
Sbjct: 432 RIWNMKTGKLLRTINGVHSKKWVRTLTIAPDNRTLVSGGD---DKNISMWNLKTGKAIRT 488

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
               +        S  G  +A +    +   +  +K       L    + + A  +S  G
Sbjct: 489 MSGHKGGVNAIAISRDGQTLA-SGSDDKTVCLWNLKTGSRMLTLSGHRAQVNALAFSRDG 547

Query: 402 RSLI 405
           ++L+
Sbjct: 548 QTLV 551


>gi|262382405|ref|ZP_06075542.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262295283|gb|EEY83214.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 490

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 60/195 (30%), Gaps = 48/195 (24%)

Query: 263 PRFSSNGKRALISVQK----------------DEAMDIYSVDLQSNATER---LTNTLFI 303
           P +  +GK    SV K                D A D+   D Q +       L++    
Sbjct: 225 PSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDSASDVVVYDTQKHEIVTSPLLSSEGAF 284

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD------------ 351
               ++SPD + + F S +  +           D   +S D     F             
Sbjct: 285 ETFPTFSPDGNTLYFCSAKA-RTMPKEYDQVRYDLCSVSFDPATRRFGTVVDTLYKASEI 343

Query: 352 ------PVWSPQGDLIAFTKFSGEKFAIGVMKKD---------GSQERLLVEDSNLQAP- 395
                 P  SP G  + +T      F+I     D          S         ++++  
Sbjct: 344 DKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLYMIDLSTLRSYPLEAANSDDVESYH 403

Query: 396 TWSPSGRSLIFSRKK 410
           +WS   R ++FS ++
Sbjct: 404 SWSSDSRWIVFSSRR 418



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 49/142 (34%), Gaps = 25/142 (17%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM------DTRIDRAPKRIGNF--- 256
           L  S       P FSP+   + + +     + + Y            D A +R G     
Sbjct: 277 LLSSEGAFETFPTFSPDGNTLYFCSAKARTMPKEYDQVRYDLCSVSFDPATRRFGTVVDT 336

Query: 257 -------RSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLF 302
                     +  PR S +GK  L ++             D+Y +DL +  +  L     
Sbjct: 337 LYKASEIDKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLYMIDLSTLRSYPLEAANS 396

Query: 303 INIS--ASYSPDSSQIVFESDR 322
            ++    S+S DS  IVF S R
Sbjct: 397 DDVESYHSWSSDSRWIVFSSRR 418



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 59/220 (26%), Gaps = 46/220 (20%)

Query: 194 CVMDRDGANIRYLTPSRDQ---ILFEPRFSPNQQKVAYATYDDEDILR------------ 238
           C +  DG  +  L    DQ    L  P + P+ + VA++    +                
Sbjct: 199 CTLLIDGDRVEKLNTKTDQTLSPLVYPSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDS 258

Query: 239 -----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE---------AMDI 284
                VY            + +  +    P FS +G        K             D+
Sbjct: 259 ASDVVVYDTQKHEIVTSPLLSSEGAFETFPTFSPDGNTLYFCSAKARTMPKEYDQVRYDL 318

Query: 285 YSVDLQ------SNATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSN- 334
            SV             + L     I+ S      SPD   +++     G   ++   ++ 
Sbjct: 319 CSVSFDPATRRFGTVVDTLYKASEIDKSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADL 378

Query: 335 ---GSDQKRISQDKEASY----FDPVWSPQGDLIAFTKFS 367
                   R    + A+         WS     I F+   
Sbjct: 379 YMIDLSTLRSYPLEAANSDDVESYHSWSSDSRWIVFSSRR 418



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 68/194 (35%), Gaps = 59/194 (30%)

Query: 307 ASYSPDSSQIVFE----------SDR------EGKEQLYVMQSNGSD--QKRISQDKEAS 348
            S+ P    + F           +DR      +    + V  +   +     +   + A 
Sbjct: 225 PSWHPSGKYVAFSVNKTKQAFHMNDRNRVEVFDSASDVVVYDTQKHEIVTSPLLSSEGAF 284

Query: 349 YFDPVWSPQGDLIAFTK---------FSGEKFAIGVMKKD------GSQERLLVE----D 389
              P +SP G+ + F           +   ++ +  +  D      G+    L +    D
Sbjct: 285 ETFPTFSPDGNTLYFCSAKARTMPKEYDQVRYDLCSVSFDPATRRFGTVVDTLYKASEID 344

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTG-----SKLYSIDLNGRNETLINTP---------- 434
            ++  P  SP G+ L+++    G+       + LY IDL+    TL + P          
Sbjct: 345 KSVSFPRVSPDGKYLLYTLSGYGNFSIWHKDADLYMIDLS----TLRSYPLEAANSDDVE 400

Query: 435 ---AYASDPQWVGF 445
              +++SD +W+ F
Sbjct: 401 SYHSWSSDSRWIVF 414


>gi|328951068|ref|YP_004368403.1| Acylaminoacyl-peptidase [Marinithermus hydrothermalis DSM 14884]
 gi|328451392|gb|AEB12293.1| Acylaminoacyl-peptidase [Marinithermus hydrothermalis DSM 14884]
          Length = 635

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 109/321 (33%), Gaps = 63/321 (19%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDF----NSRILFVSESVVSGIIKNSLCVMDRDGA 201
             PA  R++A  + D   + +T E+         R ++    V +      L  +D  G 
Sbjct: 42  GPPAYRRRLA--LWDGALRLLTQEEAYSPRYDGERYVYFLRRVKNVP---QLFRLDLRGG 96

Query: 202 NIRYLTPSRDQI-LFEPRFSPNQQKVAYATYDD-----EDILRVY--------------- 240
               LT  +  +  + P  SP+ +++A+ +  D      D  RVY               
Sbjct: 97  EAEQLTHLKAGVEAYWP--SPDGKRIAFLSRGDWEAPKRDAPRVYETLPFKFDGAGLLPE 154

Query: 241 -----LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD------EAMDIYSVDL 289
                 + +  +R P+R+      +    ++  G+  + +   D          +Y +D 
Sbjct: 155 TPRQIWLWSEAERTPRRLTQHPQDVQELAWAPTGRFIVFTAPGDARERARWRTRLYRLDP 214

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFE---SDREGK--EQLYVMQSNGSDQKRISQ- 343
                E +       +S   +PD   ++F     +R+G     LY     G   + +++ 
Sbjct: 215 SEGRVEEIGGGRGPILSPLVTPDEEAVLFIGHGWERKGGTQPALYRQPLAGGSARSLTES 274

Query: 344 ---------DKEASYFDP----VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                    + +A Y         SPQGD + FT        +  +    ++ R L  + 
Sbjct: 275 LDLWIGNTVNSDARYGAYPNRLALSPQGDAVYFTATVQGASRLIRLDLASAEARALTPEG 334

Query: 391 NLQAPTWSPSGRSLIFSRKKD 411
            +    ++     +   R++ 
Sbjct: 335 -VNIAAFALDADRVYTLRERQ 354


>gi|289641932|ref|ZP_06474087.1| serine/threonine protein kinase with WD40 repeats [Frankia symbiont
           of Datisca glomerata]
 gi|289508232|gb|EFD29176.1| serine/threonine protein kinase with WD40 repeats [Frankia symbiont
           of Datisca glomerata]
          Length = 731

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 55/300 (18%), Positives = 99/300 (33%), Gaps = 47/300 (15%)

Query: 129 RLWDVKDRKQ--IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           RLWDV DR Q  ++G+           +A   S D                     ++  
Sbjct: 443 RLWDVTDRSQPRLLGRPLTGPTDGVTSVA--FSPD-------------------GHTLAG 481

Query: 187 GIIKNSLCVMDR-DGANIRY---LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
                ++ + D  D +  R            +    FSP+ + +A  + D    L     
Sbjct: 482 SSWDRTIWLWDVTDPSAPRLSAGPVSGHRDAVTSVAFSPDGKVLASGSNDGTVRLWDVAD 541

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            +      K + +    + +  FS +G+    S   D+ + ++  DL   +  RL     
Sbjct: 542 RSGPRPLGKPLISHADAVTSVVFSPDGRTLA-SASYDKTVRLW--DLTDRSRPRLFGAPL 598

Query: 303 IN-----ISASYSPDSSQIVFESDREGKEQLYVMQSNG-----SDQKRISQDKEASYFDP 352
           +       S ++SPD   +   S  +G  +L+ + +        D  R+S     +    
Sbjct: 599 VGHTMFVFSVAFSPDGHVLASGSY-DGTIRLWDVTNRSDPHPAGDHLRVS---STTVRSV 654

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRK 409
            +SP G  +A   F G      V        R   L V    + +  +S  GR+L     
Sbjct: 655 AFSPDGRTLASGSFDGTVRLWNVTDLSSPYPRNDSLTVHGDWVMSVVFSADGRTLATGSN 714



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 83/229 (36%), Gaps = 25/229 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSPNQ+ +A ++ D    L      ++     + +      + +  FS
Sbjct: 414 LTGHTHWVLSVLFSPNQRVLASSSRDGTVRLWDVTDRSQPRLLGRPLTGPTDGVTSVAFS 473

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----FINISASYSPDSSQIVFESD 321
            +G         D  + ++  D+   +  RL+            S ++SPD   +   S+
Sbjct: 474 PDGHTLA-GSSWDRTIWLW--DVTDPSAPRLSAGPVSGHRDAVTSVAFSPDGKVLASGSN 530

Query: 322 REGKEQLYVMQSNGSDQKRISQD---KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +G  +L+ + ++ S  + + +       +    V+SP G  +A   +      + +   
Sbjct: 531 -DGTVRLWDV-ADRSGPRPLGKPLISHADAVTSVVFSPDGRTLASASYDKT---VRLWDL 585

Query: 379 -DGSQER-----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            D S+ R     L+     + +  +SP G  L        D   +L+ +
Sbjct: 586 TDRSRPRLFGAPLVGHTMFVFSVAFSPDGHVLASGSY---DGTIRLWDV 631



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 75/217 (34%), Gaps = 33/217 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVK--DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           G+V+  G +   V  RLWDV      + +GK           I+H  +D +   +    G
Sbjct: 522 GKVLASGSNDGTV--RLWDVADRSGPRPLGK---------PLISH--ADAVTSVVFSPDG 568

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYL---TPSRDQILFEPRFSPNQQKVA 227
                      ++ S     ++ + D  D +  R            +F   FSP+   +A
Sbjct: 569 ----------RTLASASYDKTVRLWDLTDRSRPRLFGAPLVGHTMFVFSVAFSPDGHVLA 618

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-S 286
             +YD    L      +    A   +    + + +  FS +G+    S   D  + ++  
Sbjct: 619 SGSYDGTIRLWDVTNRSDPHPAGDHLRVSSTTVRSVAFSPDGRTLA-SGSFDGTVRLWNV 677

Query: 287 VDLQSNATER--LTNTLFINISASYSPDSSQIVFESD 321
            DL S       LT      +S  +S D   +   S+
Sbjct: 678 TDLSSPYPRNDSLTVHGDWVMSVVFSADGRTLATGSN 714


>gi|159899424|ref|YP_001545671.1| hypothetical protein Haur_2905 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159892463|gb|ABX05543.1| hypothetical protein Haur_2905 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 357

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 50/308 (16%), Positives = 101/308 (32%), Gaps = 68/308 (22%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +  ++ DG     LT  +++ L     +S +++ +AY+       L +  + + I     
Sbjct: 61  MWSINGDGTEASQLTTVKERTLIRDAAWSHDRKTLAYSLMLPPIDLAIPWLQSSI-VCGI 119

Query: 252 RIGNFRSMILA----------PRFSSNGKRALISVQK----------DEAMDIYSVDLQS 291
                +  +LA          P ++S+ +   ++ ++           E + +    L S
Sbjct: 120 DAATGKGSLLAYGNIDVSLSEPSWASDNQSLYLTRRRTLLDAKNQFVGEEIAVARYALGS 179

Query: 292 NATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQD--KEA 347
           N    +        + + SPD   +V+   +   G   L + + +GS  + + Q      
Sbjct: 180 NQETVVVEGA---TTPALSPDGQHLVYVQPNVEIGFPSLMLAKLDGSAAQPLGQPDLPFK 236

Query: 348 SYFDPVWSPQGDLIAFT----------------------------KFSGEKFAIGVMKKD 379
           S   P WSP G  I  T                               GE  ++  +  +
Sbjct: 237 SIVAPRWSPDGSSIVMTVGGGPGAIGGGAEPSLAWWEVLLGVEIASAHGEPVSLWQVNAN 296

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
               + L ++ +     W+P G   +F    DG     L      G +  L         
Sbjct: 297 DGALKPLAQNIDDGRTAWNPDGEHFLFIHGYDGLMEYTL----ATGEDRALTPV-----Q 347

Query: 440 PQWVGFMD 447
           P W  F++
Sbjct: 348 PYW--FLE 353



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 62/188 (32%), Gaps = 28/188 (14%)

Query: 283 DIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVFESD---------REGKEQLYVM 331
           +++S++       +LT      +   A++S D   + +                  +  +
Sbjct: 60  NMWSINGDGTEASQLTTVKERTLIRDAAWSHDRKTLAYSLMLPPIDLAIPWLQSSIVCGI 119

Query: 332 QSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFS----------GEKFAIGVMKKDG 380
            +       ++    + S  +P W+     +  T+            GE+ A+       
Sbjct: 120 DAATGKGSLLAYGNIDVSLSEPSWASDNQSLYLTRRRTLLDAKNQFVGEEIAVARYALGS 179

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA----Y 436
           +QE ++VE +    P  SP G+ L++ +         L    L+G     +  P      
Sbjct: 180 NQETVVVEGATT--PALSPDGQHLVYVQPNVEIGFPSLMLAKLDGSAAQPLGQPDLPFKS 237

Query: 437 ASDPQWVG 444
              P+W  
Sbjct: 238 IVAPRWSP 245



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 60/177 (33%), Gaps = 26/177 (14%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI--LFEPRFSPNQQKVAYATYD 232
             +++V  +V  G    SL +   DG+  + L         +  PR+SP+   +      
Sbjct: 199 QHLVYVQPNVEIGFP--SLMLAKLDGSAAQPLGQPDLPFKSIVAPRWSPDGSSIV----- 251

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
               + V      I    +    +  ++L            I+    E + ++ V+    
Sbjct: 252 ----MTVGGGPGAIGGGAEPSLAWWEVLLG---------VEIASAHGEPVSLWQVNANDG 298

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           A + L   +  +   +++PD    +F     G + L        + + ++  +   +
Sbjct: 299 ALKPLAQNI-DDGRTAWNPDGEHFLFI---HGYDGLMEYTLATGEDRALTPVQPYWF 351


>gi|255016532|ref|ZP_05288658.1| putative cytochrome c binding protein [Bacteroides sp. 2_1_7]
          Length = 490

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 29/159 (18%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYAT----------YDDEDILRVYLMDTRIDRAPKRIGN 255
           LT  +D++   P FSP+   + Y +          +  +  L             +RI  
Sbjct: 279 LTSRKDELETFPTFSPDGNWIYYCSAPIQPLPDSIHSLKYSLCRISFHKDTKEWGQRIET 338

Query: 256 FR------SMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLT--NT 300
                        P+ S +GK  L +V             D++ ++LQ+   + L   N+
Sbjct: 339 VWDAQKHNGSACHPKISPDGKYLLFTVADYGTFPIWHRETDLHMMNLQTGKIDTLPAVNS 398

Query: 301 LFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNG 335
              +   S+S +S   VF S R+    GK     + S G
Sbjct: 399 DKSDTYHSWSSNSHWFVFASKRDDGLYGKPYFSYVDSTG 437



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 71/223 (31%), Gaps = 48/223 (21%)

Query: 265 FSSNGKRALISVQ----------------KDEAMDIYSVDLQSNAT--ERLTNTLF-INI 305
           F  +G+ A+ S                   D   D+   D +        LT+    +  
Sbjct: 229 FHPSGQFAVFSTNIIIPAFHSLGSKRLEVYDTTSDLVVADFRKKQLITSPLTSRKDELET 288

Query: 306 SASYSPDSSQIVFESD---------REGKEQLYVMQS--NGSDQ-KRI-----SQDKEAS 348
             ++SPD + I + S             K  L  +    +  +  +RI     +Q    S
Sbjct: 289 FPTFSPDGNWIYYCSAPIQPLPDSIHSLKYSLCRISFHKDTKEWGQRIETVWDAQKHNGS 348

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAP---TWS 398
              P  SP G  + FT      F I        +M     +   L   ++ ++    +WS
Sbjct: 349 ACHPKISPDGKYLLFTVADYGTFPIWHRETDLHMMNLQTGKIDTLPAVNSDKSDTYHSWS 408

Query: 399 PSGRSLIFSRKKDGDTGSKLY--SIDLNGRNETLINTPAYASD 439
            +    +F+ K+D     K Y   +D  G+       P    +
Sbjct: 409 SNSHWFVFASKRDDGLYGKPYFSYVDSTGKAYKPFVLPQEDPE 451


>gi|116619720|ref|YP_821876.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222882|gb|ABJ81591.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 862

 Score = 70.4 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 75/239 (31%), Gaps = 11/239 (4%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +     ++   PR SP+   +A+    +       +     D         R  +L   +
Sbjct: 329 MLLGGPEVTMGPRLSPDGHILAFQAMVEGLTQVAVMRPETGDWTALTHQRERGFVLEMSW 388

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           +++G R       D    ++SV +       +             PD S +V   + + +
Sbjct: 389 AADGSRIYYDRVTDVPRGVFSVPVLGGTEHLVLEDAMW---PQALPDGSLLVTRLNADRR 445

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL-IAFTKFSGEK---FAIGVMKKDGS 381
           +QLY         + I+      Y     S  G    A    +G       +  +     
Sbjct: 446 QQLYHFWPESGRMEAIALLTPNFYATVRASADGKRAFALGHPAGGGQAAQHLYAIDVASG 505

Query: 382 QERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             R L      DS +QA   +  G+SL+ S             ID +G   TL+    +
Sbjct: 506 SVRQLATGLPNDSAMQALALTRDGKSLLVSLVAGNMGKVAKLPIDGSGGARTLLTVSGH 564



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 72/243 (29%), Gaps = 25/243 (10%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            + R +F   +           +M  DG        +  +    P     + ++A+    
Sbjct: 618 GDGREVFAKYAGGRSR------LMVFDGTKEAAPLVNTTEETAGPVAPVGESEIAFL-VG 670

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            E    + +   R  R  +RIG     I +   + +GK  L S        ++ + L   
Sbjct: 671 PEPRRTIAMATVRNGRITRRIGFDHGTINSLAATPDGKVLLCSA----GGAVWRIPLTDG 726

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             +RL     I + A+       +  +     K +L  +  +G  ++ +   +       
Sbjct: 727 EPKRLRAGNAIALDAA----GRNLFVQVIESPKTRLIRVPLDGGAEQEVPVQEPYHLSTN 782

Query: 353 VWSP-----QGDLIA-FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGR 402
           +  P      G L+A             ++       + L  +    A      W   G 
Sbjct: 783 LIGPNAVGKDGQLVAPMLSPDAWSSPPYLIDLATGNVKRLRVEGFDFADYRFLGWGRDGE 842

Query: 403 SLI 405
            + 
Sbjct: 843 VVA 845


>gi|157368295|ref|YP_001476284.1| hypothetical protein Spro_0046 [Serratia proteamaculans 568]
 gi|157320059|gb|ABV39156.1| conserved hypothetical protein [Serratia proteamaculans 568]
          Length = 426

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 56/147 (38%), Gaps = 18/147 (12%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +  +   +   SPD S I     D  G  QL+
Sbjct: 275 GTPTQIPAPPLGVRQRRLTFTGQRRFPGVATTPRHWLRSSPDGSMIACLMKDDAGVVQLW 334

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE- 388
           V+  NG D ++++Q ++       W PQG  IA    +    ++ + +    + + L + 
Sbjct: 335 VVSPNGGDPRQVTQGEQGIQSAFSWHPQGGRIALVCDN----SLMLCEVASGRMQRLTQR 390

Query: 389 ---DSNLQAPTWSPSGRSLIFSRKKDG 412
                +  A  +SP G  + F R+ DG
Sbjct: 391 TALPPSGDAVVFSPDGSKVAFMREIDG 417



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 12/128 (9%)

Query: 256 FRSMILAPR-F---SSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTL-FINISASY 309
           F  +   PR +   S +G      ++ D   + ++ V        ++T     I  + S+
Sbjct: 300 FPGVATTPRHWLRSSPDGSMIACLMKDDAGVVQLWVVSPNGGDPRQVTQGEQGIQSAFSW 359

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFS 367
            P   +I    D      L + +      +R++Q      S    V+SP G  +AF +  
Sbjct: 360 HPQGGRIALVCDNS----LMLCEVASGRMQRLTQRTALPPSGDAVVFSPDGSKVAFMREI 415

Query: 368 GEKFAIGV 375
                I V
Sbjct: 416 DGFSQIFV 423



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 11/130 (8%)

Query: 208 PSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                +   PR     SP+   +A    DD  +++++++        +     + +  A 
Sbjct: 298 RRFPGVATTPRHWLRSSPDGSMIACLMKDDAGVVQLWVVSPNGGDPRQVTQGEQGIQSAF 357

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFES 320
            +   G R  +         +   ++ S   +RLT    +  S     +SPD S++ F  
Sbjct: 358 SWHPQGGRIALVCDNS----LMLCEVASGRMQRLTQRTALPPSGDAVVFSPDGSKVAFMR 413

Query: 321 DREGKEQLYV 330
           + +G  Q++V
Sbjct: 414 EIDGFSQIFV 423



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V+  +G + R +T     I     + P   ++A     D  ++   +   R+ R  +
Sbjct: 332 QLWVVSPNGGDPRQVTQGEQGIQSAFSWHPQGGRIALV--CDNSLMLCEVASGRMQRLTQ 389

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           R     S   A  FS +G +     + D    I+  ++
Sbjct: 390 RTALPPSGD-AVVFSPDGSKVAFMREIDGFSQIFVAEV 426


>gi|193215814|ref|YP_001997013.1| WD40 domain-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193089291|gb|ACF14566.1| WD-40 repeat protein [Chloroherpeton thalassium ATCC 35110]
          Length = 772

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 69/205 (33%), Gaps = 34/205 (16%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWD      +  K F  S            D I         +F            SG
Sbjct: 530 IRLWDANTGDLL--KTFKGSK-----------DGINAVAFSPNSEFL----------ASG 566

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + + +    N           + +  FSP+   +A A++D      + L D    
Sbjct: 567 SWDKIVTIWNIKKGNAYKKLKGHGHSINDLAFSPDGSLLASASWDK----TIKLWDVSTG 622

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLFIN 304
              K +    + + + +FS +GKR + S   + +  +  V   D+ +   +      F  
Sbjct: 623 EEIKTLTGHANGVESVKFSPDGKRIV-STSYNRSGKLCIVKLWDVATGKEDETIAGNFYG 681

Query: 305 ISASYSPDSSQIVFESDREGKEQLY 329
           +   +SPD S +   S R+   +L+
Sbjct: 682 VQ--FSPDGSTLAIAS-RDKTVKLW 703



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 54/273 (19%), Positives = 98/273 (35%), Gaps = 27/273 (9%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           + H++S+ IY       G           +  S      L  +   G  +R L   +  I
Sbjct: 459 MGHSVSEYIYSVAFSHDGK--------LLASASSDKTIKLWNVK-TGEELRTLLGHKQSI 509

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                F+   Q+  +      D  ++ L D       K     +  I A  FS N +   
Sbjct: 510 NAV-VFN---QEDTFLASAGSDG-KIRLWDANTGDLLKTFKGSKDGINAVAFSPNSEFLA 564

Query: 274 ISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            S   D+ + I+++  + NA ++L  +   IN  A +SPD S +   S     + + +  
Sbjct: 565 -SGSWDKIVTIWNI-KKGNAYKKLKGHGHSINDLA-FSPDGSLLASAS---WDKTIKLWD 618

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDS 390
            +  ++ +             +SP G  I  T    SG+   + +      +E   +   
Sbjct: 619 VSTGEEIKTLTGHANGVESVKFSPDGKRIVSTSYNRSGKLCIVKLWDVATGKEDETIA-G 677

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           N     +SP G +L  + +   D   KL+S  L
Sbjct: 678 NFYGVQFSPDGSTLAIASR---DKTVKLWSAPL 707


>gi|326428905|gb|EGD74475.1| WD-40 repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 2296

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 59/403 (14%), Positives = 118/403 (29%), Gaps = 68/403 (16%)

Query: 88   KQKITNPDSIPRFQDWNSLGAQVL--------VTGRVIKEGKDRLRVE------FRLWDV 133
              +I +       + W++   + L        V   V         V        R+WD 
Sbjct: 1880 GTRIVSGSEDHTVRVWDARTGEQLTQCEGHTRVIQSVSLSTDGTRIVSGSNDETVRIWDA 1939

Query: 134  KDRKQIIGKKFFSS-------PASWRKIAHTISD---DIYQSITGEK----GDFNSRILF 179
                Q+  +   +S        A   +IA   SD    ++ +   E     G + S +  
Sbjct: 1940 TTGAQLAQRDGHTSGVSSVMFSADGTRIASGSSDGTVRVWNTFVSEDVDRCGRYASHVNV 1999

Query: 180  VSESVVS-----GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---- 230
            V  S        G    ++ ++D                +    FSP+ + V        
Sbjct: 2000 VRFSPDGTRIACGSRDATIRILDAVTGEQLGRCHGHSGEVTSVAFSPDGEHVVSVGGEED 2059

Query: 231  ------YDDEDILRVYLMDTRIDRAPKRIGN---FRSMILAPRFSSNGKRALISVQKDEA 281
                  +       V + DTR  +      +   +     +  FS +G R +++      
Sbjct: 2060 TGEEILHVTPRDNTVRIWDTRTGKQLAECQHQCAWDECFTSVAFSPDGTR-VVAGSSHTT 2118

Query: 282  MDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+  D ++     +         S  + PD +++   SD    + + V  +    Q  
Sbjct: 2119 VRIW--DARTGEQLHQCKRHTDWVTSVGFCPDGTRVASGSD---DKTVRVWNARNGKQLS 2173

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPT 396
              +          +SP G  +A          + V        + L         + + +
Sbjct: 2174 KCKGHMGRVTSVAFSPDGTRVASGSDDKT---VRVWNA--RNGKQLTLCDGHTRGVFSVS 2228

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            +SP G  ++ S  +D         +   G    LI    Y  +
Sbjct: 2229 FSPDGTRVV-SGSRDNT-----VRVWDAGSGAQLIQKDTYIGN 2265



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 94/275 (34%), Gaps = 48/275 (17%)

Query: 107  GAQVLVTGRVIKEGKDRLRVE-----FRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS-D 160
            G  V+  G     G++ L V       R+WD +  KQ+   +            H  + D
Sbjct: 2048 GEHVVSVGGEEDTGEEILHVTPRDNTVRIWDTRTGKQLAECQ------------HQCAWD 2095

Query: 161  DIYQSI-TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            + + S+     G            VV+G    ++ + D       +        +    F
Sbjct: 2096 ECFTSVAFSPDG----------TRVVAGSSHTTVRIWDARTGEQLHQCKRHTDWVTSVGF 2145

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
             P+  +VA  + D      V + + R  +   +       + +  FS +G R   S   D
Sbjct: 2146 CPDGTRVASGSDDK----TVRVWNARNGKQLSKCKGHMGRVTSVAFSPDGTRVA-SGSDD 2200

Query: 280  EAMDIYSVDLQSNATERLT----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            + + ++     +   ++LT    +T  +  S S+SPD +++V       ++    +   G
Sbjct: 2201 KTVRVW----NARNGKQLTLCDGHTRGV-FSVSFSPDGTRVV----SGSRDNTVRVWDAG 2251

Query: 336  SDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGE 369
            S  + I +D    +      S  G  I        
Sbjct: 2252 SGAQLIQKDTYIGNVNVVQVSADGTRIVSGSADNT 2286



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 75/229 (32%), Gaps = 37/229 (16%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             + +       +    FSP+  +V   ++D      V + D R      +       + +
Sbjct: 1667 CKLVITGHSSEVTSVGFSPDGTRVVSGSHDQ----TVRVWDARTGEQLTQCEGHTFSVTS 1722

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFE 319
              FS +G+R ++S   D+ + ++  D ++   E+LT          SA +SPD +++V  
Sbjct: 1723 VGFSPDGRR-VVSGSSDKTVRVW--DARTG--EQLTQCEGHTSRVNSAGFSPDGTRVVSG 1777

Query: 320  SDREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA------------- 362
            S           + V  +   +Q    +          +SP G  +              
Sbjct: 1778 SGETYGKNDDNTVRVWDARTGEQLMQCEGHRICVRSVGFSPDGTCVVSAGGTTVHEPDYS 1837

Query: 363  --FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI 405
              + + SG    I +        R   E      P      S  G  ++
Sbjct: 1838 YSWVEVSGVGMNIRIWDAWTG--RQTQELKGHSLPVTSLALSVDGTRIV 1884



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/320 (15%), Positives = 100/320 (31%), Gaps = 48/320 (15%)

Query: 113  TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
               V      R  V        R+WD +  +Q+            +   HT    +  + 
Sbjct: 1720 VTSVGFSPDGRRVVSGSSDKTVRVWDARTGEQLT-----------QCEGHT--SRVNSAG 1766

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                G   +R++  S         N++ V D                +    FSP+   V
Sbjct: 1767 FSPDG---TRVVSGSGETYGKNDDNTVRVWDARTGEQLMQCEGHRICVRSVGFSPDGTCV 1823

Query: 227  A-------------YATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
                          Y+  +   + + + + D    R  + +      + +   S +G R 
Sbjct: 1824 VSAGGTTVHEPDYSYSWVEVSGVGMNIRIWDAWTGRQTQELKGHSLPVTSLALSVDGTRI 1883

Query: 273  LISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDREGKEQLY 329
            + S  +D  + ++  D ++   E+LT          S S S D ++IV  S+    E + 
Sbjct: 1884 V-SGSEDHTVRVW--DARTG--EQLTQCEGHTRVIQSVSLSTDGTRIVSGSN---DETVR 1935

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +  +    Q        +     ++S  G  IA +  S     +         +R     
Sbjct: 1936 IWDATTGAQLAQRDGHTSGVSSVMFSADGTRIA-SGSSDGTVRVWNTFVSEDVDRCGRYA 1994

Query: 390  SNLQAPTWSPSGRSLIFSRK 409
            S++    +SP G  +    +
Sbjct: 1995 SHVNVVRFSPDGTRIACGSR 2014



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 72/193 (37%), Gaps = 24/193 (12%)

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISAS 308
             I    S + +  FS +G R ++S   D+ + ++  D ++   E+LT      F   S  
Sbjct: 1670 VITGHSSEVTSVGFSPDGTR-VVSGSHDQTVRVW--DARTG--EQLTQCEGHTFSVTSVG 1724

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPD  ++V  S     + + V  +   +Q    +   +      +SP G  +     SG
Sbjct: 1725 FSPDGRRVVSGSS---DKTVRVWDARTGEQLTQCEGHTSRVNSAGFSPDGTRVV--SGSG 1779

Query: 369  EKFA------IGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIF---SRKKDGDTGSK 417
            E +       + V      ++ +  E   +   +  +SP G  ++    +   + D    
Sbjct: 1780 ETYGKNDDNTVRVWDARTGEQLMQCEGHRICVRSVGFSPDGTCVVSAGGTTVHEPDYSYS 1839

Query: 418  LYSIDLNGRNETL 430
               +   G N  +
Sbjct: 1840 WVEVSGVGMNIRI 1852



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 90/287 (31%), Gaps = 30/287 (10%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---YDDEDILR 238
              VVSG    ++ V D                +    FSP+  +V   +   Y   D   
Sbjct: 1730 RRVVSGSSDKTVRVWDARTGEQLTQCEGHTSRVNSAGFSPDGTRVVSGSGETYGKNDDNT 1789

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKDEAMDIYS------VD 288
            V + D R      +    R  + +  FS +G   +     +V + +    +       ++
Sbjct: 1790 VRVWDARTGEQLMQCEGHRICVRSVGFSPDGTCVVSAGGTTVHEPDYSYSWVEVSGVGMN 1849

Query: 289  LQ------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++         T+ L        S + S D ++IV  S+      + V  +   +  +++
Sbjct: 1850 IRIWDAWTGRQTQELKGHSLPVTSLALSVDGTRIVSGSE---DHTVRVWDARTGE--QLT 1904

Query: 343  QDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            Q +  +        S  G  I  +  + E   I          +     S + +  +S  
Sbjct: 1905 QCEGHTRVIQSVSLSTDGTRIV-SGSNDETVRIWDATTGAQLAQRDGHTSGVSSVMFSAD 1963

Query: 401  GRSLIFSRKKDGDTGSKLYS---IDLNGRNETLINTPAYASDPQWVG 444
            G  +              +    +D  GR  + +N   ++ D   + 
Sbjct: 1964 GTRIASGSSDGTVRVWNTFVSEDVDRCGRYASHVNVVRFSPDGTRIA 2010



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 74/249 (29%), Gaps = 37/249 (14%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             VVSG    ++ V D                +    FSP+ ++V   + D      V + 
Sbjct: 1689 RVVSGSHDQTVRVWDARTGEQLTQCEGHTFSVTSVGFSPDGRRVVSGSSDK----TVRVW 1744

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEAMDIYSVDLQSNATERLT 298
            D R      +     S + +  FS +G R +     +  K++   +   D ++   E+L 
Sbjct: 1745 DARTGEQLTQCEGHTSRVNSAGFSPDGTRVVSGSGETYGKNDDNTVRVWDARTG--EQLM 1802

Query: 299  N---TLFINISASYSPDSSQIV---------------FESDREGKEQLYVMQSNGSDQKR 340
                      S  +SPD + +V               +         + +  +    Q +
Sbjct: 1803 QCEGHRICVRSVGFSPDGTCVVSAGGTTVHEPDYSYSWVEVSGVGMNIRIWDAWTGRQTQ 1862

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPT 396
              +           S  G  I       E   + V      +   L         +Q+ +
Sbjct: 1863 ELKGHSLPVTSLALSVDGTRIV---SGSEDHTVRVWDARTGE--QLTQCEGHTRVIQSVS 1917

Query: 397  WSPSGRSLI 405
             S  G  ++
Sbjct: 1918 LSTDGTRIV 1926


>gi|307128839|ref|YP_003880855.1| hypothetical protein Dda3937_02526 [Dickeya dadantii 3937]
 gi|306526368|gb|ADM96298.1| conserved protein [Dickeya dadantii 3937]
          Length = 428

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 22/159 (13%)

Query: 279 DEAMDIYSVDLQSNATERLT-----NTLFINISAS-Y---SPDSSQIVF-ESDREGKEQL 328
                            RLT     +   +      +   SPD SQI F   D  G  QL
Sbjct: 274 GGTDAALPAPPAGVRQRRLTFTADRSYPGVVNQPRHWLRSSPDGSQIAFLMKDDRGVVQL 333

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           + +  NG   ++++Q          W P G  +AF   +       VM  + +  RL+ +
Sbjct: 334 WTVSPNGGAPRQVTQGDWPVQSAFSWHPDGRHLAFICDNS------VMLCEVATGRLIRQ 387

Query: 389 DSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +  + P       +SP+G  + + R  DG     + ++
Sbjct: 388 TARSETPPVGDAVVFSPNGDRIAYLRDIDGYNQIFVVTV 426



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 52/131 (39%), Gaps = 11/131 (8%)

Query: 208 PSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            S   ++ +PR     SP+  ++A+   DD  +++++ +        +       +  A 
Sbjct: 298 RSYPGVVNQPRHWLRSSPDGSQIAFLMKDDRGVVQLWTVSPNGGAPRQVTQGDWPVQSAF 357

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFES 320
            +  +G+             +   ++ +    R T    T  +  +  +SP+  +I +  
Sbjct: 358 SWHPDGRHLAFICDNS----VMLCEVATGRLIRQTARSETPPVGDAVVFSPNGDRIAYLR 413

Query: 321 DREGKEQLYVM 331
           D +G  Q++V+
Sbjct: 414 DIDGYNQIFVV 424



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 51/151 (33%), Gaps = 17/151 (11%)

Query: 146 SSPASWRKIAHTI-SDDIYQSITGEKGDF------NSRILFVSESVVSGIIKNSLCVMDR 198
           + PA  R+   T  +D  Y  +  +   +       S+I F+ +          L  +  
Sbjct: 282 APPAGVRQRRLTFTADRSYPGVVNQPRHWLRSSPDGSQIAFLMK---DDRGVVQLWTVSP 338

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-- 256
           +G   R +T     +     + P+ + +A+   +      V L +    R  ++      
Sbjct: 339 NGGAPRQVTQGDWPVQSAFSWHPDGRHLAFICDN-----SVMLCEVATGRLIRQTARSET 393

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             +  A  FS NG R       D    I+ V
Sbjct: 394 PPVGDAVVFSPNGDRIAYLRDIDGYNQIFVV 424



 Score = 43.5 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 79/263 (30%), Gaps = 55/263 (20%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV------QKDEAM 282
               D+D  +   +D  +  +P   G  R       FS +G R   +       ++D A+
Sbjct: 104 VVMHDDDRRQATTLDACVLTSPYLAGALRGGSHVHVFSPDGSRLSFTYNDHVLHERDPAL 163

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESD-----REGKEQLYVMQSNG- 335
           D+ +V         L   +  +       D S   V  SD     R G + +      G 
Sbjct: 164 DLRNV----GVAVPLHPVVAPHRHPR-EHDGSHFCVLVSDTTPQPRSGSDDINRAYEEGW 218

Query: 336 -SDQKRISQDKEASYFDPVW-----SPQGDLI--AFTKFSGEKFAIGVMKKD-------- 379
                 +  D     +   +     S +G+ +   F     E+        D        
Sbjct: 219 VGTAGYLRPDGRRQRWALAFIGDTLSARGEKVPEVFLVDLPEQLDDYARPGDRPLGGTDA 278

Query: 380 -------GSQERLLVEDSNLQAP-------TW---SPSGRSLIFSRKKDGDTGSKLYSID 422
                  G ++R L   ++   P        W   SP G  + F   KD     +L+++ 
Sbjct: 279 ALPAPPAGVRQRRLTFTADRSYPGVVNQPRHWLRSSPDGSQIAFL-MKDDRGVVQLWTVS 337

Query: 423 LNGRNETLINTPAYASDPQWVGF 445
            NG     +    +   P    F
Sbjct: 338 PNGGAPRQVTQGDW---PVQSAF 357


>gi|77748567|ref|NP_641540.2| alanyl dipeptidyl peptidase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 706

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 46/114 (40%), Gaps = 10/114 (8%)

Query: 260 ILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYS 310
           + +P  + +G   L       +     A  ++  +L++      +RLT   +   S + S
Sbjct: 36  VSSPTLTPDGSSVLFAKRQAKTANGKPATSLWVRNLRTRDLSPPKRLTPEGWNVNSPALS 95

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           PD   + F S + G +QLY     G   ++++            SP G  IAF+
Sbjct: 96  PDGKTVYFLSSKSGSQQLYAQPMAGGTPQQLT-AFAVDVDSYKLSPGGKRIAFS 148



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 81/274 (29%), Gaps = 51/274 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           +  P  +P+   V +A    +         L V  + TR    PKR+      + +P  S
Sbjct: 36  VSSPTLTPDGSSVLFAKRQAKTANGKPATSLWVRNLRTRDLSPPKRLTPEGWNVNSPALS 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +GK       K  +  +Y+  +     ++LT       S   SP   +I F +   G  
Sbjct: 96  PDGKTVYFLSSKSGSQQLYAQPMAGGTPQQLTAFAVDVDSYKLSPGGKRIAFSA---GVF 152

Query: 327 QLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           Q                  +    +  D+        W+       F        A  V+
Sbjct: 153 QDCGSDLGCTKKKLGERKNNKASGVIYDQLFVRHWDTWNDGRRNTLFVAELPAAGAKAVV 212

Query: 377 KKDGSQERLLVED-----SNLQAPTWSPSGRSLIFS-----------------------R 408
                   L  +            TWSP G S++ S                        
Sbjct: 213 GASAISATLAGDAPSKPFGGNDDYTWSPDGSSVVASVRIPQPHGPEAGKNAKASGKPTGN 272

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +   T   LY +D  G++  +  T   A++P W
Sbjct: 273 DEPWQTNFDLYRLDATGKSAPVNLT---AANPAW 303



 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/332 (15%), Positives = 100/332 (30%), Gaps = 66/332 (19%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R      S  ++Q    + G    ++     +  SG+I + L V   D  N
Sbjct: 135 SYKLSPGGKRIA---FSAGVFQDCGSDLGCTKKKLGERKNNKASGVIYDQLFVRHWDTWN 191

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSM 259
                              + ++      +        ++         A          
Sbjct: 192 -------------------DGRRNTLFVAELPAAGAKAVVGASAISATLAGDAPSKPFGG 232

Query: 260 ILAPRFSSNGKRALISVQKDE-------------------------AMDIYSVDLQSNA- 293
                +S +G   + SV+  +                           D+Y +D    + 
Sbjct: 233 NDDYTWSPDGSSVVASVRIPQPHGPEAGKNAKASGKPTGNDEPWQTNFDLYRLDATGKSA 292

Query: 294 TERLTN-TLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQD 344
              LT      +    +S D   +         FE+DR G   L  M       + I+  
Sbjct: 293 PVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFG---LMAMDVASGKTREIAPK 349

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S  + V S  G  +  +     +  +  +     +   LV + ++ APT +  G +L
Sbjct: 350 WDRSAGEIVLSDDGSSLYTSADDLGEHPLFKIDIASGEAAKLVGEGSVHAPTLA--GNTL 407

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            F+R     +G +++  D  G+    I+  A 
Sbjct: 408 AFTRS-SLKSGDQVFVSDTQGQGLRAISQSAG 438



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 45/312 (14%), Positives = 87/312 (27%), Gaps = 69/312 (22%)

Query: 183 SVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +G    SL V +   RD +  + LTP    +   P  SP+ + V + +   +   + 
Sbjct: 56  KTANGKPATSLWVRNLRTRDLSPPKRLTPEGWNVN-SPALSPDGKTVYFLS--SKSGSQQ 112

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                     P+++  F   + + + S  GKR   S            DL     ++L  
Sbjct: 113 LYAQPMAGGTPQQLTAFAVDVDSYKLSPGGKRIAFSA---GVFQDCGSDL-GCTKKKLGE 168

Query: 300 TLFINISA------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE- 346
                 S             +++      +F ++             G+     +   + 
Sbjct: 169 RKNNKASGVIYDQLFVRHWDTWNDGRRNTLFVAE---LPAAGAKAVVGASAISATLAGDA 225

Query: 347 -----ASYFDPVWSPQGDLIAFTKFSG-------------------------EKFAIGVM 376
                    D  WSP G  +  +                               F +  +
Sbjct: 226 PSKPFGGNDDYTWSPDGSSVVASVRIPQPHGPEAGKNAKASGKPTGNDEPWQTNFDLYRL 285

Query: 377 KKDG-SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETL 430
              G S    L     +    P +S  G++L +   K     +    L ++D+       
Sbjct: 286 DATGKSAPVNLTAANPAWDAGPVFSTDGKTLYYRAMKRPGFEADRFGLMAMDVASGKTRE 345

Query: 431 INTPAYASDPQW 442
           I        P+W
Sbjct: 346 IA-------PKW 350


>gi|113476744|ref|YP_722805.1| WD-40 repeat-containing protein [Trichodesmium erythraeum IMS101]
 gi|110167792|gb|ABG52332.1| WD-40 repeat [Trichodesmium erythraeum IMS101]
          Length = 1304

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 85/239 (35%), Gaps = 29/239 (12%)

Query: 193 LCVMDRDG--------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           L ++  DG                     + + +F+P    +  AT  D+   R++    
Sbjct: 693 LAIVSNDGTAKILEFSGEPISQLRGHQGKISQIKFAPEGNLL--ATAADDATARIWDFQG 750

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +     K     +  I    FS +GK    +  +D    I+  D+       L       
Sbjct: 751 KQQVELK---GHKGQIWEITFSPDGKLLA-TAGEDGTARIW--DISGQKIAILKKHQGRI 804

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +  ++S D   +   +  +G  +++   S    Q  I +  + S    ++SP G  +A T
Sbjct: 805 LDITFSSDGKYLA-TAGWDGTARIW---SPSGKQLAILKGHQGSVEKIIFSPNGKYLATT 860

Query: 365 KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            + G    I + ++     +LL +    +   ++S  G+  +       D  + ++++ 
Sbjct: 861 GWDGT---IRIWRRSSG--KLLSKLKGGVWNISFSSDGKRFV---TAGEDGTANIWNVS 911



 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 102/335 (30%), Gaps = 64/335 (19%)

Query: 129  RLWDVK---DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
            ++W++    D K +       +   W      I+             F+S   +++ +  
Sbjct: 762  QIWEITFSPDGKLLATAGEDGTARIWDISGQKIAILKKHQGRILDITFSSDGKYLATAGW 821

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             G  +    +    G  +  +       + +  FSPN + +A   +D         +   
Sbjct: 822  DGTAR----IWSPSGKQLA-ILKGHQGSVEKIIFSPNGKYLATTGWDG-------TIRIW 869

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
               + K +   +  +    FSS+GKR  ++  +D   +I+  ++      +L        
Sbjct: 870  RRSSGKLLSKLKGGVWNISFSSDGKR-FVTAGEDGTANIW--NVSGQLLGKLPGHQGTVT 926

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-- 363
            S S+SPD   +       G +    +  N  +     +       +  +S  G L+    
Sbjct: 927  SISFSPDGQCLA----TAGNDGSVKVWDNNGNLLTYLKGHLGRVLEMNFSSDGQLLLTLG 982

Query: 364  ---------------------------TKFSGEKFAIGVMKKDGSQE------RLLVE-- 388
                                         FS     +  +  DG          LL E  
Sbjct: 983  EDGTGRVWDLEANYEAKIQGNSEIFGGVSFSSNSEKLATVAVDGVTRIWDISGNLLTEFN 1042

Query: 389  --DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                     ++SP G+ L        ++ ++++ +
Sbjct: 1043 GSLGMFGDMSFSPDGKYLA---TAGDNSQARIWQV 1074



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 71/209 (33%), Gaps = 22/209 (10%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            AN         +I     FS N +K+A    D        + D   +   +  G+   M 
Sbjct: 994  ANYEAKIQGNSEIFGGVSFSSNSEKLATVAVDG----VTRIWDISGNLLTEFNGSL-GMF 1048

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                FS +GK    +    +A  I+ V             +   IS S+  D  ++    
Sbjct: 1049 GDMSFSPDGKYLATAGDNSQAR-IWQVLGGELIELEGEEGMAKQISFSF--DGQRLA-TV 1104

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              +G  +++   +N  ++    +       D  +SP G  I  T        I       
Sbjct: 1105 GEDGVARIW---NNSGERLVELKGHNGRVLDVDFSPDGKYIG-TAGEDGVGKIW-----D 1155

Query: 381  SQERLLVE----DSNLQAPTWSPSGRSLI 405
            S  RL+ E     S +++  +SPSG  + 
Sbjct: 1156 SSFRLVSELKIVSSWMESIGFSPSGEYIA 1184


>gi|317129053|ref|YP_004095335.1| WD40-like beta Propeller containing protein [Bacillus
           cellulosilyticus DSM 2522]
 gi|315474001|gb|ADU30604.1| WD40-like beta Propeller containing protein [Bacillus
           cellulosilyticus DSM 2522]
          Length = 697

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 52/116 (44%), Gaps = 8/116 (6%)

Query: 263 PRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P+ +++  + +  +Q+      +   +IY +DL S   ++LT     + +   SPD  ++
Sbjct: 19  PQLTNDNNKLIYVIQELDKEKDEMRSNIYLMDLVSGEKKQLT-YSDKDNNPKLSPDGEKL 77

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            F S R  K Q++++  +G +   I  + EA     +W+     I ++      + 
Sbjct: 78  AFISTRSEKSQIWILPMDGGEPYCIKTE-EAVMGPLIWTSDSSNILYSANVFNDYH 132



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 85/269 (31%), Gaps = 45/269 (16%)

Query: 216 EPRFSPNQQKVAYATYDDED-----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            P+ + +  K+ Y   + +         +YLMD       +   + +     P+ S +G+
Sbjct: 18  NPQLTNDNNKLIYVIQELDKEKDEMRSNIYLMDLVSGEKKQLTYSDKDNN--PKLSPDGE 75

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------REG 324
           +      + E   I+ + +       +     +     ++ DSS I++ ++         
Sbjct: 76  KLAFISTRSEKSQIWILPMDGGEPYCIKTEEAVMGPLIWTSDSSNILYSANVFNDYHEAW 135

Query: 325 KEQLYVMQSNGSDQKRISQDKEA-------------------SYFDPVWSPQGDLIAFTK 365
                    +    K I  +K                     S F   +   G    F  
Sbjct: 136 TPYPGAPDYDYDRLKAIESNKHKTKDEKDKEKEKKKNEVKVISRFTYRF--DGQG-YFGH 192

Query: 366 FSGEKFAIGVMKKDG-----SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK--- 417
            +   F   V  +          ++  +D +  AP+ SP+   L+   +K  +   +   
Sbjct: 193 GNNHVFITAVPNQITPNFKAQGIQITTDDYDYSAPSLSPNNEYLVVCARKSKEADYEQKN 252

Query: 418 -LYSIDL-NGRNETLINTPAYASDPQWVG 444
            L+ I L   +N  L + P   S P W  
Sbjct: 253 DLWIIHLKTKKNYLLYDAPGPTSSPNWSP 281



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 8/99 (8%)

Query: 348 SYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           S  +P  +   + + +       +    +  I +M     +++ L        P  SP G
Sbjct: 15  STGNPQLTNDNNKLIYVIQELDKEKDEMRSNIYLMDLVSGEKKQLTYSDKDNNPKLSPDG 74

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             L F   +     S+++ + ++G     I T      P
Sbjct: 75  EKLAFISTRSEK--SQIWILPMDGGEPYCIKTEEAVMGP 111



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 101/293 (34%), Gaps = 56/293 (19%)

Query: 174 NSRILFVSES--VVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           N+++++V +        +++++ +MD   G   +     +D     P+ SP+ +K+A+ +
Sbjct: 25  NNKLIYVIQELDKEKDEMRSNIYLMDLVSGEKKQLTYSDKDN---NPKLSPDGEKLAFIS 81

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQK-DEAMDIYSV- 287
              E   +++++                 ++ P  ++S+    L S    ++  + ++  
Sbjct: 82  TRSEKS-QIWILPMDGGEPYCIKT--EEAVMGPLIWTSDSSNILYSANVFNDYHEAWTPY 138

Query: 288 ----DLQSNATERLTNTLFINISA------------------SYSPDSSQIVFESDREGK 325
               D   +  + + +                          +Y  D  Q  F     G 
Sbjct: 139 PGAPDYDYDRLKAIESNKHKTKDEKDKEKEKKKNEVKVISRFTYRFDG-QGYFG---HGN 194

Query: 326 EQLYVMQSNGSDQK-------RISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFA 372
             +++                +I+ D +  Y  P  SP  + +       +      K  
Sbjct: 195 NHVFITAVPNQITPNFKAQGIQITTD-DYDYSAPSLSPNNEYLVVCARKSKEADYEQKND 253

Query: 373 IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK---KDGDTGSKLYSI 421
           + ++     +  LL +      +P WSP G+ + FS     +   T + L+ +
Sbjct: 254 LWIIHLKTKKNYLLYDAPGPTSSPNWSPCGKFVSFSGHNNMEGASTTNDLWVL 306


>gi|238757301|ref|ZP_04618487.1| hypothetical protein yaldo0001_32180 [Yersinia aldovae ATCC 35236]
 gi|238704340|gb|EEP96871.1| hypothetical protein yaldo0001_32180 [Yersinia aldovae ATCC 35236]
          Length = 433

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 59/158 (37%), Gaps = 20/158 (12%)

Query: 280 EAMDIYSVDLQSNATERLT-----NTLFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           R+T         +      +   SPD S I     D  G  QL+
Sbjct: 281 GTETTLPAPPAGVTQRRITCTAERRFPGLTTHPRHWLRSSPDGSAIACLMKDDNGMVQLW 340

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++  NG + ++++  +        W PQGD +AF   +    ++ + +    Q   L   
Sbjct: 341 LVSPNGGEPRQLTSCQGGIQSAFSWRPQGDCLAFVCDN----SVMLCESRSGQLHRLTAR 396

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   A  +SP G  + F R+ DG   ++++++++
Sbjct: 397 SVATPLADAVVFSPDGNKVAFMREIDG--LAQIFTVNV 432



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 46/134 (34%), Gaps = 13/134 (9%)

Query: 208 PSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                +   PR     SP+   +A    DD  +++++L+        +       +  A 
Sbjct: 304 RRFPGLTTHPRHWLRSSPDGSAIACLMKDDNGMVQLWLVSPNGGEPRQLTSCQGGIQSAF 363

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT----NTLFINISASYSPDSSQIVFE 319
            +   G              +   + +S    RLT     T   +    +SPD +++ F 
Sbjct: 364 SWRPQGDCLAFVCDNS----VMLCESRSGQLHRLTARSVATPLADAV-VFSPDGNKVAFM 418

Query: 320 SDREGKEQLYVMQS 333
            + +G  Q++ +  
Sbjct: 419 REIDGLAQIFTVNV 432



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 7/100 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++  +G   R LT  +  I     + P    +A+   +      V L ++R  +  +
Sbjct: 338 QLWLVSPNGGEPRQLTSCQGGIQSAFSWRPQGDCLAFVCDN-----SVMLCESRSGQLHR 392

Query: 252 RIGNF--RSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                    +  A  FS +G +     + D    I++V++
Sbjct: 393 LTARSVATPLADAVVFSPDGNKVAFMREIDGLAQIFTVNV 432


>gi|319900117|ref|YP_004159845.1| WD40-like beta Propeller containing protein [Bacteroides helcogenes
           P 36-108]
 gi|319415148|gb|ADV42259.1| WD40-like beta Propeller containing protein [Bacteroides helcogenes
           P 36-108]
          Length = 486

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 70/231 (30%), Gaps = 51/231 (22%)

Query: 263 PRFSSNGKRALISVQK----------------DEAMDIYSVDLQSNATER---LTNTLFI 303
           P +   GK    SV                  D A DI     +++   R   L      
Sbjct: 220 PYWHPGGKYIAYSVNNTRQAFHCAKEERIEVLDLASDILVYHPETHELLRSPLLQKKEAF 279

Query: 304 NISASYSPDSSQIVFESD------------REGKEQLYVMQSNGSDQKRISQDKEA---- 347
                +SPD  ++ F S             R     +     +G+  +++     A    
Sbjct: 280 ETFPVFSPDGRKLYFCSAEAKPIPERYKEIRYSLCSIEFNSQDGTFGEQVDTLVNAEVVK 339

Query: 348 -SYFDPVWSPQGDLIAFTKFSGEKFAI-------GVMKKDGSQERLLVEDSNLQAPT--- 396
            S   P  S  G  I FT      F+I        ++       R +   ++    +   
Sbjct: 340 KSISFPRPSYDGKYIMFTLSDYGNFSIWHKEADLWLLNLQDGSMRPMKNVNSDDTESFHN 399

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYS--IDLNGRNETLINTPAYASDPQWVGF 445
           WS + R  +F  ++     ++LY   ID NG+       P    +  W  +
Sbjct: 400 WSSNSRWFVFGSRRGDGLYTRLYLACIDENGQTGKPFLLP---QENSWEYY 447



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 67/179 (37%), Gaps = 29/179 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGN 255
           L   ++     P FSP+ +K+ + + + + I   Y            +++     +++  
Sbjct: 272 LLQKKEAFETFPVFSPDGRKLYFCSAEAKPIPERYKEIRYSLCSIEFNSQDGTFGEQVDT 331

Query: 256 ------FRSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLF 302
                  +  I  PR S +GK  + ++             D++ ++LQ  +   + N   
Sbjct: 332 LVNAEVVKKSISFPRPSYDGKYIMFTLSDYGNFSIWHKEADLWLLNLQDGSMRPMKNVNS 391

Query: 303 INIS--ASYSPDSSQIVFESDREGK--EQLYV--MQSNGSDQKRISQDKEASYFDPVWS 355
            +     ++S +S   VF S R      +LY+  +  NG   K     +E S+     S
Sbjct: 392 DDTESFHNWSSNSRWFVFGSRRGDGLYTRLYLACIDENGQTGKPFLLPQENSWEYYDRS 450



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 29/87 (33%), Gaps = 20/87 (22%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEK----------------FAIGVMKKDGSQE-- 383
           +    ++   P W P G  IA++  +  +                  I V   +  +   
Sbjct: 210 TDSTLSACVYPYWHPGGKYIAYSVNNTRQAFHCAKEERIEVLDLASDILVYHPETHELLR 269

Query: 384 -RLLVEDSNLQ-APTWSPSGRSLIFSR 408
             LL +    +  P +SP GR L F  
Sbjct: 270 SPLLQKKEAFETFPVFSPDGRKLYFCS 296


>gi|318061774|ref|ZP_07980495.1| WD-40 repeat-containing protein [Streptomyces sp. SA3_actG]
          Length = 1954

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 43/334 (12%), Positives = 100/334 (29%), Gaps = 51/334 (15%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
             +          RLWDV   +++                H +   + +        F+  
Sbjct: 1621 TRLASAGSDGTVRLWDVATGRRL----------------HEL---VGRGNRLISAAFSPV 1661

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               ++ +  +G     + + D DG              +   FS + +++A A  DD   
Sbjct: 1662 GTVLATAGSTGH----VYLWDADGGAFLRELDVETDRTWAEAFSADGEEIATANDDD--- 1714

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-E 295
              V L          ++   +  + +  F+ +G     +   D  + ++    +  A   
Sbjct: 1715 -SVRLWRRATGSHGLQLDGHQGRVRSVAFAKDGATIA-TGCDDGRVRLW--HTRGGALAA 1770

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             L+       + ++ PD S +   S  +G   ++         + + ++     +     
Sbjct: 1771 TLSAHTDRVYAVAFGPDLSWLASAS-WDGTAVIWR----DGAARHVLREHTGKLWTAAAH 1825

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            P    +     +G+   I +           L      + + ++SP G  L        D
Sbjct: 1826 P---TLPLVATAGDDRVIRLWDPATGARVGALTGHSGRVYSLSFSPDGGHLA---SAGDD 1879

Query: 414  TGSKLYSIDLN--GRNETLINTPAYASDPQWVGF 445
               +L+ +  +      TL+          W  F
Sbjct: 1880 GTVRLWRVTGDAVTPKATLVGVQGG-----WAAF 1908



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 88/281 (31%), Gaps = 29/281 (10%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
               G +   +      + +G     + + D       +  P    +++   FSP+ + +A
Sbjct: 1344 HPDGVWPITLNATGTVLATGDGDGVVRLWDTASGEQTHAFPGHTVLVYTTVFSPDGRTLA 1403

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                  +    V L DT        +G  +  +   RFS +G   L +   +   D  +V
Sbjct: 1404 ----TGDRSGTVRLWDTVTGALVASLGPHQGPVFRVRFSPDGT--LFATADEGIDDHGTV 1457

Query: 288  DLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
             +   + +RL +          +  + PD   +    D +G  +L+              
Sbjct: 1458 RIWRASDQRLLHEMRGHTGRVYTLDFHPDGDLLA-SGDTDGGVRLW--DPRTGLPGPALD 1514

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---------RLLVEDSNLQA 394
                  +  V++  G  +A    +G   A+ + +     E         +      +  A
Sbjct: 1515 KGAGGVYQVVFADDGRHLAACHSNG---AVRLWQLSAGHEGYEAAPERFQPTPHQGSAWA 1571

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
              + P    L+       D   +++     G+ + ++    
Sbjct: 1572 CRFRPDDTQLV---TAGDDGVVQIWDA-ATGQGKPILRGHG 1608



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/322 (14%), Positives = 92/322 (28%), Gaps = 40/322 (12%)

Query: 112  VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
             TG V+  G     V  RLWD    +Q                 HT+   +Y ++    G
Sbjct: 1355 ATGTVLATGDGDGVV--RLWDTASGEQTHA-----------FPGHTV--LVYTTVFSPDG 1399

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
                       ++ +G    ++ + D     +          +F  RFSP+    A A  
Sbjct: 1400 ----------RTLATGDRSGTVRLWDTVTGALVASLGPHQGPVFRVRFSPDGTLFATADE 1449

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              +D   V +      R    +      +    F  +G     S   D  + ++  D ++
Sbjct: 1450 GIDDHGTVRIWRASDQRLLHEMRGHTGRVYTLDFHPDGDLLA-SGDTDGGVRLW--DPRT 1506

Query: 292  NATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD----QKRIS-QDK 345
                  L           ++ D   +       G  +L+ + +         +R      
Sbjct: 1507 GLPGPALDKGAGGVYQVVFADDGRHLAAC-HSNGAVRLWQLSAGHEGYEAAPERFQPTPH 1565

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            + S +   + P    +  T        I        +  L      + A  +  +G  L 
Sbjct: 1566 QGSAWACRFRPDDTQLV-TAGDDGVVQIWDAATGQGKPILRGHGRRVNAVAFDATGTRLA 1624

Query: 406  FSRKKDGDTGSKLYSIDLNGRN 427
                   D   +L+ +   GR 
Sbjct: 1625 ---SAGSDGTVRLWDV-ATGRR 1642



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 67/208 (32%), Gaps = 10/208 (4%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             + A  R+         +  RF P+  ++        D   V + D    +    +    
Sbjct: 1553 YEAAPERFQPTPHQGSAWACRFRPDDTQLV----TAGDDGVVQIWDAATGQGKPILRGHG 1608

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              + A  F + G R   S   D  + ++ V         L       ISA++SP  + + 
Sbjct: 1609 RRVNAVAFDATGTRLA-SAGSDGTVRLWDV-ATGRRLHELVGRGNRLISAAFSPVGTVLA 1666

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                      +Y+  ++G    R    +    +   +S  G+ IA T    +   +    
Sbjct: 1667 ---TAGSTGHVYLWDADGGAFLRELDVETDRTWAEAFSADGEEIA-TANDDDSVRLWRRA 1722

Query: 378  KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  +L      +++  ++  G ++ 
Sbjct: 1723 TGSHGLQLDGHQGRVRSVAFAKDGATIA 1750



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 62/191 (32%), Gaps = 11/191 (5%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++ +G     + +    G  +     +    ++   F P+   +A A++D      ++  
Sbjct: 1748 TIATGCDDGRVRLWHTRGGALAATLSAHTDRVYAVAFGPDLSWLASASWD--GTAVIWRD 1805

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                    +  G   +    P         L++   D+ +              LT    
Sbjct: 1806 GAARHVLREHTGKLWTAAAHPTLP------LVATAGDDRVIRLWDPATGARVGALTGHSG 1859

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S S+SPD   +    D +G  +L+ +  +    K      +  +    ++P G   A
Sbjct: 1860 RVYSLSFSPDGGHLASAGD-DGTVRLWRVTGDAVTPKATLVGVQGGWA--AFTPDGGYKA 1916

Query: 363  FTKFSGEKFAI 373
              +  GE + +
Sbjct: 1917 EGEVGGEFWHV 1927


>gi|317502988|ref|ZP_07961075.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
 gi|315665897|gb|EFV05477.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
          Length = 493

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 55/343 (16%), Positives = 108/343 (31%), Gaps = 62/343 (18%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASW---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           +L      + I  +        W     I + IS D   S          R+++    + 
Sbjct: 95  QLLKTAAGQAIFFRISVKEAGKWVVYPSITNRISRDAIDSFL------VYRLIYPGYELW 148

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             +      +   +   I        Q +    F+ N  + A      +D   +     R
Sbjct: 149 HEMGIYQRNLTSFEQTPIVENKDFNRQCVNCHSFNHNDAQQAMLHVRGKDGGTLIYRHGR 208

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----------------KDEAMDIYSVDL 289
           +++   +     + +  P +  NGK    S                   D A D+   D+
Sbjct: 209 VEKVASKADALPNGLTYPAWHPNGKLIAFSTNEIQQFFHSAGKKTIEVADLAADLVVYDV 268

Query: 290 QSNATERLTNTLFI------NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +     R+     I          ++SP+  Q+ F   R  + +L  + S   D  R++ 
Sbjct: 269 EH---HRVQTFSAIGLPTHAETFPAWSPNGRQLYFCRARMPQSRL-ALDSMRYDLCRVTF 324

Query: 344 DKE-----------------ASYFDPVWSPQGDLIAFTKFSGEKFAI-------GVMKKD 379
           D +                  S   PV SP G+ + FT      F+I        ++   
Sbjct: 325 DAQKMKFGNVETIYPASKFHRSASFPVVSPDGNFVVFTLSDYGNFSIWHPESDLWMLNVR 384

Query: 380 GSQERLLVEDSNLQAPTW---SPSGRSLIFSRKKDGDTGSKLY 419
             + R L   ++    +W   S SG+ ++ S K+     ++ +
Sbjct: 385 TGECRELKAVNSPNVDSWHGFSASGKWMVLSSKRLNGGWAQPW 427



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 28/172 (16%)

Query: 192 SLCVMDRDGANIRYLTPSR--DQILFEPRFSPNQQKVAYATYDDE------DILRVYLMD 243
            L V D +   ++  +           P +SPN +++ +            D +R  L  
Sbjct: 262 DLVVYDVEHHRVQTFSAIGLPTHAETFPAWSPNGRQLYFCRARMPQSRLALDSMRYDLCR 321

Query: 244 TRIDRAPKRIGN---------FRSMILAPRFSSNGKRALISVQKDEAM-------DIYSV 287
              D    + GN         F      P  S +G   + ++             D++ +
Sbjct: 322 VTFDAQKMKFGNVETIYPASKFHRSASFPVVSPDGNFVVFTLSDYGNFSIWHPESDLWML 381

Query: 288 DLQSNATERL--TNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNG 335
           ++++     L   N+  ++    +S     +V  S R   G  Q +    + 
Sbjct: 382 NVRTGECRELKAVNSPNVDSWHGFSASGKWMVLSSKRLNGGWAQPWFTHFDS 433



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 50/188 (26%)

Query: 305 ISASYSPDSSQIVFESD-------REGKEQLYVMQS-------NGSDQKRISQD----KE 346
              ++ P+   I F ++         GK+ + V          +    +  +        
Sbjct: 224 TYPAWHPNGKLIAFSTNEIQQFFHSAGKKTIEVADLAADLVVYDVEHHRVQTFSAIGLPT 283

Query: 347 ASYFDPVWSPQGDLIAFTK---------FSGEKFAIGVMKKD------GSQERLLVEDSN 391
            +   P WSP G  + F +             ++ +  +  D      G+ E +      
Sbjct: 284 HAETFPAWSPNGRQLYFCRARMPQSRLALDSMRYDLCRVTFDAQKMKFGNVETIYPASKF 343

Query: 392 LQAPTW---SPSGRSLIFSRKKDGDTG-----SKLYSIDL-NG--RNETLINTP------ 434
            ++ ++   SP G  ++F+    G+       S L+ +++  G  R    +N+P      
Sbjct: 344 HRSASFPVVSPDGNFVVFTLSDYGNFSIWHPESDLWMLNVRTGECRELKAVNSPNVDSWH 403

Query: 435 AYASDPQW 442
            +++  +W
Sbjct: 404 GFSASGKW 411



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 33/99 (33%), Gaps = 20/99 (20%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF----------------AIGVMKKDGSQERLLVE- 388
                 P W P G LIAF+    ++F                 + V   +  + +     
Sbjct: 220 PNGLTYPAWHPNGKLIAFSTNEIQQFFHSAGKKTIEVADLAADLVVYDVEHHRVQTFSAI 279

Query: 389 ---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                    P WSP+GR L F R +   +   L S+  +
Sbjct: 280 GLPTHAETFPAWSPNGRQLYFCRARMPQSRLALDSMRYD 318


>gi|149175861|ref|ZP_01854479.1| putative WD-repeat containing protein [Planctomyces maris DSM 8797]
 gi|148845308|gb|EDL59653.1| putative WD-repeat containing protein [Planctomyces maris DSM 8797]
          Length = 964

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 69/210 (32%), Gaps = 13/210 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+SP+ + +  ++       +  + D    +        + ++ A   S + K    +  
Sbjct: 196 RYSPDGEWLITSSGTTGLFGQAAIWDVESGKKLHEFVGHKDVLYAAAISPDRKWLA-TGS 254

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + ++ +         LT         ++SPDS+ ++  S       + V Q +   
Sbjct: 255 YDQNIILWDI-ATGKQVRSLTGHNGAIFDLAFSPDSTTLISAS---ADATVKVWQVSTGK 310

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAP- 395
           +           +   +SP G+ I              + +  ++   L+      + P 
Sbjct: 311 RLDTLSQPLKEQYSVTFSPDGNFILAAGADNRIRKWRFISRTSAKINPLIYARFAHENPV 370

Query: 396 ---TWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +SP G+ L        D   K++   
Sbjct: 371 TQIAFSPDGKLLA---SISDDQSLKIWDAS 397



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 72/219 (32%), Gaps = 27/219 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP   ++A A +++     V L+   + +  +        + + R+S +G+  + S  
Sbjct: 155 AWSPQTDQIAVARFEE-----VKLLSPDLKKVIQSWKGLPGKVNSVRYSPDGEWLITSSG 209

Query: 278 KDEAMDIYSV-DLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                   ++ D++S            +  +A+ SPD   +   S     + + +     
Sbjct: 210 TTGLFGQAAIWDVESGKKLHEFVGHKDVLYAAAISPDRKWLATGSY---DQNIILWDIAT 266

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-- 393
             Q R       + FD  +SP    +           + V +    +    +     +  
Sbjct: 267 GKQVRSLTGHNGAIFDLAFSPDSTTLISASADAT---VKVWQVSTGKRLDTLSQPLKEQY 323

Query: 394 APTWSPSGRSLI------------FSRKKDGDTGSKLYS 420
           + T+SP G  ++            F  +        +Y+
Sbjct: 324 SVTFSPDGNFILAAGADNRIRKWRFISRTSAKINPLIYA 362



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/285 (14%), Positives = 84/285 (29%), Gaps = 41/285 (14%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           +   G   L  +  +WDV+  K++              + H   D +Y +       +  
Sbjct: 205 ITSSGTTGLFGQAAIWDVESGKKLHE-----------FVGHK--DVLYAAAISPDRKWL- 250

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                     +G    ++ + D             +  +F+  FSP+   +  A+ D   
Sbjct: 251 ---------ATGSYDQNIILWDIATGKQVRSLTGHNGAIFDLAFSPDSTTLISASAD--- 298

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              V +      +    +        +  FS +G   L +   +       +   S    
Sbjct: 299 -ATVKVWQVSTGKRLDTLSQPLKEQYSVTFSPDGNFILAAGADNRIRKWRFISRTSAKIN 357

Query: 296 RLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            L    F + +     ++SPD   +   SD    + L +  ++      + ++  A    
Sbjct: 358 PLIYARFAHENPVTQIAFSPDGKLLASISD---DQSLKIWDASQLILLYVQENLPALPTS 414

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            V+S           +G    I +        R L      Q PT
Sbjct: 415 VVFSTDSRETLVGYNNGLLEKIEL-------PRQLSPSDETQTPT 452


>gi|71279274|ref|YP_267848.1| dipeptidyl peptidase IV [Colwellia psychrerythraea 34H]
 gi|71145014|gb|AAZ25487.1| dipeptidyl peptidase IV [Colwellia psychrerythraea 34H]
          Length = 752

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 91/288 (31%), Gaps = 85/288 (29%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAP------------- 263
           +FSP+  +V Y     ED+ R  L +     +  K + + +S+   P             
Sbjct: 57  KFSPDGTRVTYLQGKAEDLNRYDLWEYNLASKENKLLVDSQSLFSGPENLSDEEKARRER 116

Query: 264 -----------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                      +FS +G   L  +  D    IY   L +   +RLT T        +SP 
Sbjct: 117 QRIYGVGIMEYQFSQDGSALLFPLNGD----IYYYHLTTKTAKRLTETAGFETDVKFSPQ 172

Query: 313 SSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WS 355
            +   F S  RE  + +YV+     ++++++ D   +  + +                WS
Sbjct: 173 GN---FVSYIRE--QNIYVLNIASGEERQLTIDGGGTIKNGMSEFVAQEEMSRMTGYWWS 227

Query: 356 PQGDLIAFTKFSGE------------------------------KFAIGVMKKDGSQERL 385
           P    IAF +                                     + V    G + R 
Sbjct: 228 PNEKHIAFLRVDETPVKTVIRNEIYAEKIELIEQRYPATGTNNVHIQLAVTDIKGKKIRF 287

Query: 386 --LVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             L ++ ++  P   W    + + +  +        L + +L  R + 
Sbjct: 288 VELGDNKDIYIPRVKWLSDSKKVSYQLQSRDQKTLTLKTYNLKKRRQK 335



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 75/226 (33%), Gaps = 47/226 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRI-------DRAPKRIGNFRSMILAPRFSSNGK 270
            +SPN++ +A+   D+  +  V   +           R P    N   + LA      GK
Sbjct: 225 WWSPNEKHIAFLRVDETPVKTVIRNEIYAEKIELIEQRYPATGTNNVHIQLAVT-DIKGK 283

Query: 271 RALISVQKDEAMDIYS-------------VDLQSNATERLT------------------- 298
           +    V+  +  DIY                LQS   + LT                   
Sbjct: 284 KIRF-VELGDNKDIYIPRVKWLSDSKKVSYQLQSRDQKTLTLKTYNLKKRRQKTLLVEKS 342

Query: 299 -NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + L ++   ++  D+   ++ S+R+G + LY     G    ++++ +           +
Sbjct: 343 SHWLNLHKDLTFLSDNKTFIWASERDGYKHLYHYNLKGELISQLTKGEWVVDSLTRVDEK 402

Query: 358 GDLIAFTKFSGE--KFAIGVMKKDGS---QERLLVEDSNLQAPTWS 398
              + FT  +    +  +  +   G      + + + +   +  +S
Sbjct: 403 NGWVYFTGRADTPLERHLYKVPLSGKSPENVQRITKRNGFHSINFS 448


>gi|146291747|ref|YP_001182171.1| peptidase S9 prolyl oligopeptidase [Shewanella putrefaciens CN-32]
 gi|145563437|gb|ABP74372.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella putrefaciens CN-32]
          Length = 826

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 78/226 (34%), Gaps = 13/226 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++  +A    ++          T   R  + + ++     A ++  +G +  + ++  + 
Sbjct: 337 DEDVLAKVKTENAKAKGETYQSTLAPRKIQLMQDWGWTQSAIQWHESGAKVALMLEATDN 396

Query: 282 MDIYSVDLQSNATERLTNTLFINISAS--------YSPDSSQIVFESDREGKEQLYVMQS 333
            D +   +  +  + +T     + +          + P +  + + S+  G  QLY+   
Sbjct: 397 KDRWIASVDLSKGKFITEHRLHDDAWVNYDYNQFGWVPGTDTLYYLSEETGYSQLYIKSL 456

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSN 391
            G   + ++Q K     D   SP    I +         + +  +     +   L +   
Sbjct: 457 -GEKPRALTQGKFV-VNDITLSPDASFIYYKANQNHPGIYNVHRVNISTGKNEQLTQWDG 514

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               + SP G  L+ +  +      +LY   + G  + L +  + A
Sbjct: 515 NLDYSLSPDGTKLLLNASRRTQPN-ELYIQSIGGELKQLTSYTSDA 559



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 65/173 (37%), Gaps = 13/173 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSR-------DQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
               +   D +  +++T  R       +    +  + P    + Y + +        L  
Sbjct: 397 KDRWIASVDLSKGKFITEHRLHDDAWVNYDYNQFGWVPGTDTLYYLSEETG---YSQLYI 453

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
             +   P+ +   + ++     S +         ++     +++ V++ +   E+LT   
Sbjct: 454 KSLGEKPRALTQGKFVVNDITLSPDASFIYYKANQNHPGIYNVHRVNISTGKNEQLTQWD 513

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             N+  S SPD ++++  + R  +     +QS G + K+++     ++ +  W
Sbjct: 514 G-NLDYSLSPDGTKLLLNASRRTQPNELYIQSIGGELKQLTSYTSDAFKNYPW 565


>gi|109896525|ref|YP_659780.1| peptidase S9, prolyl oligopeptidase active site region
           [Pseudoalteromonas atlantica T6c]
 gi|109698806|gb|ABG38726.1| peptidase S9, prolyl oligopeptidase active site region
           [Pseudoalteromonas atlantica T6c]
          Length = 638

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 84/230 (36%), Gaps = 13/230 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGKRALISV- 276
           + PN +++ Y   ++ D    + + +      K +  F      P +  ++G+    S  
Sbjct: 101 WHPNGKELIYGADNNGDEREAFNLISIDGLHEKIVLPFTDAYRVPGWFDTSGRHFAYSST 160

Query: 277 -QKDEAMDIYSVD--LQSNATE-RLTNTLFINISAS-YSPDSSQIVFE--SDREGKEQLY 329
            +     DIY VD   QSN    RL            + P+   ++       +G     
Sbjct: 161 ERNGRDFDIYVVDFNAQSNKLTPRLMYQAEYFFRPHQWQPNGEHLIVTEAVGEDGANVYL 220

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVE 388
           +  SNG           +SY + VWS  G+   FT   G++   +       + ER L  
Sbjct: 221 LNNSNGKMSSVFKPQIPSSYGNFVWSASGESFYFTSNEGQEMNALRQYDLSSATERTLFS 280

Query: 389 -DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            D +++       G  L+++  ++G     +Y +  +  N+  I  P   
Sbjct: 281 GDYDIENVQVCKQGTYLVWTTNENGFDKLHIYHLQRD--NQQQIPLPQGV 328



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 93/259 (35%), Gaps = 14/259 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILRVYLMD- 243
           +G  + +  ++  DG + + + P  D       F  + +  AY++   +     +Y++D 
Sbjct: 115 NGDEREAFNLISIDGLHEKIVLPFTDAYRVPGWFDTSGRHFAYSSTERNGRDFDIYVVDF 174

Query: 244 -TRIDRAPKRIGNFRSMILAP-RFSSNGKRALIS-VQKDEAMDIYSVDLQSNATE----- 295
             + ++   R+         P ++  NG+  +++    ++  ++Y ++  +         
Sbjct: 175 NAQSNKLTPRLMYQAEYFFRPHQWQPNGEHLIVTEAVGEDGANVYLLNNSNGKMSSVFKP 234

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++ ++    +   +S       F S+   +          S  +R     +    +    
Sbjct: 235 QIPSSYGNFV---WSASGESFYFTSNEGQEMNALRQYDLSSATERTLFSGDYDIENVQVC 291

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            QG  + +T        + +       ++ +     + + + +  G+ L+  R     T 
Sbjct: 292 KQGTYLVWTTNENGFDKLHIYHLQRDNQQQIPLPQGVYSLSCAEQGKDLL-VRITGPATP 350

Query: 416 SKLYSIDLNGRNETLINTP 434
             LY +DL  +   L+  P
Sbjct: 351 GSLYLVDLTNQQTELLLAP 369



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 35/82 (42%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           ++   +PQG + A+         + ++     +   L   + +    W P+G+ LI+   
Sbjct: 54  YNASLNPQGTIAAYMSDVSGAPQLWLIHIKDKKVTQLTFGNGITHYLWHPNGKELIYGAD 113

Query: 410 KDGDTGSKLYSIDLNGRNETLI 431
            +GD       I ++G +E ++
Sbjct: 114 NNGDEREAFNLISIDGLHEKIV 135


>gi|110639606|ref|YP_679816.1| WD-40-like repeat-containing protein [Cytophaga hutchinsonii ATCC
           33406]
 gi|110282287|gb|ABG60473.1| WD-40 repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 1048

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 73/204 (35%), Gaps = 17/204 (8%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             +A  TY    I+   +  T+  R  KR       I +  FS++GK  + S  +    D
Sbjct: 362 SILASITYKKGKIIYEVVDVTKKKRIEKREIEVFHQINSYAFSTDGKYVVYSADEKGQSD 421

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-------------KEQLYV 330
           I+  DL  +   ++TN  + + S  + P  + ++F S+R                  LY+
Sbjct: 422 IWLYDLDRSKYLKVTNDEYDDHSPRFGP-GNAVIFSSNRNDDTLFTLTRYQSAPNYSLYI 480

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-ED 389
            +      KRI   + +++  P +      I +         +          + L    
Sbjct: 481 YKPGDKVLKRI-PAQASNFTKPAF-INATTILYLNDENGVQNLYTQDLKTGVSKPLTNNT 538

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGD 413
           +++    ++ +   L F  +  G 
Sbjct: 539 TDILEYDFNAANNYLAFIARSRGK 562



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 64/180 (35%), Gaps = 30/180 (16%)

Query: 255 NFRSMILA-PRFSSNGKRALISVQKDEAMDIYS--------VDLQSNA-----TERLTNT 300
           NF+   +  P  S++GK    SV       +            +          + +T  
Sbjct: 294 NFKGRDITTPVLSTDGKYLAYSVNNKGRYSVLLREVEKRKKKKIAGGGFKLNDQQPITRN 353

Query: 301 L--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK---EASYFDPVWS 355
                          S +   + ++GK    V+    + +KRI + +           +S
Sbjct: 354 PLLAWQTE-------SILASITYKKGKIIYEVVDV--TKKKRIEKREIEVFHQINSYAFS 404

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             G  + ++     +  I +   D S+  ++  ++ +  +P + P G ++IFS  ++ DT
Sbjct: 405 TDGKYVVYSADEKGQSDIWLYDLDRSKYLKVTNDEYDDHSPRFGP-GNAVIFSSNRNDDT 463



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 95/237 (40%), Gaps = 36/237 (15%)

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           ++ + + DV  +K+I  ++         ++ H I+             F++   +V  S 
Sbjct: 373 KIIYEVVDVTKKKRIEKREI--------EVFHQINSY----------AFSTDGKYVVYS- 413

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFSPNQQKVAYATYDDEDIL------ 237
                ++ + + D D    +YL  + D+     PRF P    V +++  ++D L      
Sbjct: 414 ADEKGQSDIWLYDLD--RSKYLKVTNDEYDDHSPRFGP-GNAVIFSSNRNDDTLFTLTRY 470

Query: 238 -----RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                    +    D+  KRI    S    P F  N    L    ++   ++Y+ DL++ 
Sbjct: 471 QSAPNYSLYIYKPGDKVLKRIPAQASNFTKPAF-INATTILYLNDENGVQNLYTQDLKTG 529

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV-MQSNGSDQKRISQDKEAS 348
            ++ LTN     +   ++  ++ + F +   GKE++++    + ++   I+   + S
Sbjct: 530 VSKPLTNNTTDILEYDFNAANNYLAFIARSRGKEKIFIDTAFSFTNAVTITGKTDQS 586



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/163 (12%), Positives = 59/163 (36%), Gaps = 24/163 (14%)

Query: 299 NTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQ---------SNGS----DQKRISQD 344
           N    +  +   S D   + +  + +G+  + + +         + G     DQ+ I+++
Sbjct: 294 NFKGRDITTPVLSTDGKYLAYSVNNKGRYSVLLREVEKRKKKKIAGGGFKLNDQQPITRN 353

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTWSPSG 401
              ++           +A   +   K    V+        ++R +     + +  +S  G
Sbjct: 354 PLLAWQTESI------LASITYKKGKIIYEVVDVTKKKRIEKREIEVFHQINSYAFSTDG 407

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           + +++S  + G +   LY +D + +   + N       P++  
Sbjct: 408 KYVVYSADEKGQSDIWLYDLDRS-KYLKVTNDEYDDHSPRFGP 449


>gi|159122828|gb|EDP47949.1| NACHT and WD40 domain protein [Aspergillus fumigatus A1163]
          Length = 525

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 83/250 (33%), Gaps = 28/250 (11%)

Query: 204 RYLTPSRDQILFEP--------RFSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRI 253
           R++      I   P         FSP    V   +       +  +  +        + +
Sbjct: 264 RFVLKHAQMINMAPLQVYCSGLAFSPTDSIVRRIFNNKQPSWLPVLPQVHKSWSAELQTL 323

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPD 312
               S + +  FS +G+R + S   D  + ++  D Q+ +  +       ++ S ++SPD
Sbjct: 324 EGHSSWVSSVAFSPDGQRIV-SGSDDNTIKLW--DAQTGSELQSLQGHSDSVHSVAFSPD 380

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +IV  SD      + +  +    + R  +          +SP G  I           
Sbjct: 381 GQRIVSGSD---HNTIKLWDAQTGSELRSLEGHSDWVHSVAFSPDGQRIVIY-----GSK 432

Query: 373 IGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           I +     GS+ + L   S+     +  +     F  +    +   + S  +  R E +I
Sbjct: 433 IRLWDAQTGSELQSLQSHSDYVTYAFLGN-----FRVEHKQGSHISVESSWVCFRGERVI 487

Query: 432 NTPAYASDPQ 441
             P    +P 
Sbjct: 488 WLPPELREPS 497



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 11/126 (8%)

Query: 173 FNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           + S + F    + +VSG   N++ + D    +           +    FSP+ Q++    
Sbjct: 329 WVSSVAFSPDGQRIVSGSDDNTIKLWDAQTGSELQSLQGHSDSVHSVAFSPDGQRIV--- 385

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               D   + L D +     + +      + +  FS +G+R +I   K     I   D Q
Sbjct: 386 -SGSDHNTIKLWDAQTGSELRSLEGHSDWVHSVAFSPDGQRIVIYGSK-----IRLWDAQ 439

Query: 291 SNATER 296
           + +  +
Sbjct: 440 TGSELQ 445


>gi|303238966|ref|ZP_07325497.1| WD40 domain protein beta Propeller [Acetivibrio cellulolyticus CD2]
 gi|302593599|gb|EFL63316.1| WD40 domain protein beta Propeller [Acetivibrio cellulolyticus CD2]
          Length = 704

 Score = 70.4 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 70/213 (32%), Gaps = 50/213 (23%)

Query: 256 FRSMILAPRFSSNGKRALISV----------QKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 +   S + K+ + +            ++    I+ V++      +LT+  + + 
Sbjct: 109 VGGAFYSFDLSYDAKQIVFAYTDAQNSYDVWNQNTTYHIFKVNVDGTNLTQLTDGNYNDF 168

Query: 306 SASYSPDSSQIVFESDREGKE-----------QLYVMQSNGSDQKRISQDKEASYFDPVW 354
              + PD  +IVF S+R G              L+ M ++GSD + IS      +    W
Sbjct: 169 DPRWLPDG-RIVFISERRGGYGRCHQRVVPTFNLHTMNADGSDIRCISY-----HETNEW 222

Query: 355 SP---QGDLIAFTKFS------GEKFAIGVMKKDGSQERLLVEDSNLQAPTW-------- 397
           SP      +I +T++           +  +   DG   R +V +       W        
Sbjct: 223 SPSVDNNGMIIYTRWDYVDRGANHPHSAWITTPDGLDARAVVLNYPNSGSEWWRNVPLMQ 282

Query: 398 -----SPSG-RSLIFSRKKDGDTGSKLYSIDLN 424
                 P+  + +  +          L  ID +
Sbjct: 283 NSLRAIPNSNKYVATAAPHHAQNYGPLIVIDPD 315



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/146 (11%), Positives = 51/146 (34%), Gaps = 25/146 (17%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI--------DRAPKRIGNFRSMILAPRFSSNGKR 271
           S + +++ +A  D ++   V+  +T               ++ +       PR+  +G+ 
Sbjct: 119 SYDAKQIVFAYTDAQNSYDVWNQNTTYHIFKVNVDGTNLTQLTDGNYNDFDPRWLPDGRI 178

Query: 272 ALISVQKDE----------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES- 320
             IS ++              ++++++   +    ++       S S   +   I++   
Sbjct: 179 VFISERRGGYGRCHQRVVPTFNLHTMNADGSDIRCISYHETNEWSPSVDNNG-MIIYTRW 237

Query: 321 ---DREGK--EQLYVMQSNGSDQKRI 341
              DR        ++   +G D + +
Sbjct: 238 DYVDRGANHPHSAWITTPDGLDARAV 263


>gi|301309004|ref|ZP_07214949.1| putative Cytochrome c binding protein [Bacteroides sp. 20_3]
 gi|300833030|gb|EFK63655.1| putative Cytochrome c binding protein [Bacteroides sp. 20_3]
          Length = 484

 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 60/159 (37%), Gaps = 29/159 (18%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDIL-------------RVYLMDTRIDRAPKR 252
           LT  +D++   P FSP+   + Y +   + +                +       +  + 
Sbjct: 273 LTSRKDELETFPTFSPDGNWIYYCSAPIQPLPDSIHNLKYSLCRISFHKDTKEWGQRIET 332

Query: 253 IGNFRSMILA---PRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLT--NT 300
           + + +    +   P+ S +GK  L +V             D++ ++L++   + L   N+
Sbjct: 333 VWDAQKHNGSACHPKISPDGKYLLFTVADYGTFPIWHRETDLHMMNLKTGKIDTLPAVNS 392

Query: 301 LFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNG 335
              +   S+S +S   VF S R+    GK     + S G
Sbjct: 393 DKSDTYHSWSSNSHWFVFASKRDDGLYGKPYFSYVDSTG 431



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 75/233 (32%), Gaps = 48/233 (20%)

Query: 255 NFRSMILAPRFSSNGKRALISVQ----------------KDEAMDIYSVDLQSNAT--ER 296
           N  +  +   F  +G+ A+ S                   D   D+   D +        
Sbjct: 213 NLPNGAVYGDFHPSGQFAVFSTNIIIPAFHSLGSKRLEVYDTTSDLMVADFRKKQLITSP 272

Query: 297 LTNTLF-INISASYSPDSSQIVFES-------DREGKEQLYVMQS----NGSDQ-KRI-- 341
           LT+    +    ++SPD + I + S       D     +  + +     +  +  +RI  
Sbjct: 273 LTSRKDELETFPTFSPDGNWIYYCSAPIQPLPDSIHNLKYSLCRISFHKDTKEWGQRIET 332

Query: 342 ---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSN 391
              +Q    S   P  SP G  + FT      F I        +M     +   L   ++
Sbjct: 333 VWDAQKHNGSACHPKISPDGKYLLFTVADYGTFPIWHRETDLHMMNLKTGKIDTLPAVNS 392

Query: 392 LQAP---TWSPSGRSLIFSRKKDGDTGSKLY--SIDLNGRNETLINTPAYASD 439
            ++    +WS +    +F+ K+D     K Y   +D  G+       P    +
Sbjct: 393 DKSDTYHSWSSNSHWFVFASKRDDGLYGKPYFSYVDSTGKAYKPFVLPQEDPE 445


>gi|158521040|ref|YP_001528910.1| hypothetical protein Dole_1023 [Desulfococcus oleovorans Hxd3]
 gi|158509866|gb|ABW66833.1| hypothetical protein Dole_1023 [Desulfococcus oleovorans Hxd3]
          Length = 534

 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 70/204 (34%), Gaps = 26/204 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRV----------YLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            ++P+ + + +    +++ + V          Y + T  +   K        I  P FS 
Sbjct: 246 TWAPDNKSLVFVAIKNDNWITVKNGREMPSGKYTIQTVFNPVKKVYEYMVPQITPPVFSP 305

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +  R   ++ ++    I   D +    +R+           +SPDS    +     GK  
Sbjct: 306 DASRLAFTMIEEFRYRIRVEDQKGPLFDRV-------GEPVFSPDSRHYAYIGIVSGKTN 358

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            Y    +G+         E      V+SP     AF   + +     V+     Q+    
Sbjct: 359 QYAFIYDGNPIA----TYEGIVPPVVFSPDAQRTAFRIANEKGMGSVVVD---GQKAEWY 411

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKD 411
           +D  +  P +SP  + + +   K+
Sbjct: 412 DD--ISTPVFSPDSKHVAYKALKN 433



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 58/335 (17%), Positives = 99/335 (29%), Gaps = 69/335 (20%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI----RYLTPSRDQILFEPR 218
            Q +T +K       +     V S        +    G NI    +   P  D       
Sbjct: 73  MQVMTNDKAGKLYDQIARGFPVFSPQKNRVGYIATLAGKNIVVVDKTEYPGFDGACCL-T 131

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--------------- 263
           FSP+ +  AY    +    +V L +         I     ++  P               
Sbjct: 132 FSPDGKSFAYIAQKEGK--QVVLFNGTPHDPFDAIDRQIGLVFGPGSSRLAYSGLDQGRV 189

Query: 264 -------------------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                               FS + K              + V   +      T   F  
Sbjct: 190 ILVIDGKPQERAWDIIDEIAFSPDAKNIACIATT--QKKYFVVQNST------TYGPFDM 241

Query: 305 ISA-SYSPDSSQIVFES-----------DREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             A +++PD+  +VF +            RE     Y +Q+  +  K++ +        P
Sbjct: 242 AEALTWAPDNKSLVFVAIKNDNWITVKNGREMPSGKYTIQTVFNPVKKVYEYMVPQITPP 301

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           V+SP    +AFT     ++ I V  + G     L +   +  P +SP  R   +     G
Sbjct: 302 VFSPDASRLAFTMIEEFRYRIRVEDQKG----PLFD--RVGEPVFSPDSRHYAYIGIVSG 355

Query: 413 DTGSKLYSIDLN--GRNETLINTPAYASDPQWVGF 445
            T    +  D N     E ++    ++ D Q   F
Sbjct: 356 KTNQYAFIYDGNPIATYEGIVPPVVFSPDAQRTAF 390



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 65/197 (32%), Gaps = 25/197 (12%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  P FSP+  ++A+   + E   R+ + D +     +        +  P FS + +   
Sbjct: 298 ITPPVFSPDASRLAFTMIE-EFRYRIRVEDQKGPLFDR--------VGEPVFSPDSRHYA 348

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                    + Y+     N    +     I     +SPD+ +  F    E      V+  
Sbjct: 349 YIGIVSGKTNQYAFIYDGNP---IATYEGIVPPVVFSPDAQRTAFRIANEKGMGSVVVDG 405

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             ++              PV+SP    +A+     +K  + V KK+              
Sbjct: 406 QKAEW-------YDDISTPVFSPDSKHVAYKALKNKKVFMVVDKKEHGPFDDTTP----- 453

Query: 394 APTWSPSGRSLIFSRKK 410
            P +SP    + +  ++
Sbjct: 454 -PFFSPDSNCMAYLARE 469



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 71/224 (31%), Gaps = 35/224 (15%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D + + +        + I  VS        K +      DG N           +    F
Sbjct: 333 DRVGEPVFSPDSRHYAYIGIVS-------GKTNQYAFIYDG-NPIATYEGIVPPVV---F 381

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ Q+ A+   +++ +  V +          +   +   I  P FS + K       K+
Sbjct: 382 SPDAQRTAFRIANEKGMGSVVVDG--------QKAEWYDDISTPVFSPDSKHVAYKALKN 433

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                  VD +        +  F + +   +SPDS+ + + +         ++  +    
Sbjct: 434 -KKVFMVVDKKE-------HGPFDDTTPPFFSPDSNCMAYLAREAPYSCFLIVNDD---- 481

Query: 339 KRISQDKEASYFDPVWSPQGD-LIAFTK--FSGEKFAIGVMKKD 379
           K +  +   +Y        GD  + F        +F +  +  +
Sbjct: 482 KVLPFNSFFNYQQTPIVFDGDNQLHFIGLFLENNRFKVYRIDAE 525



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 12/115 (10%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +++    SA  SPDS+ + +    E   Q+      G    +I++        PV+SPQ 
Sbjct: 46  DSMAYAESAVISPDSTHLAYVVKNETGMQVMTNDKAGKLYDQIARG------FPVFSPQK 99

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           + + +      K  I V+     +      D      T+SP G+S  +  +K+G 
Sbjct: 100 NRVGYIATLAGK-NIVVVD----KTEYPGFDGACCL-TFSPDGKSFAYIAQKEGK 148



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 50/169 (29%), Gaps = 21/169 (12%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +   S +       V+ +  M + + D      +++           +SP  +++ + + 
Sbjct: 53  SAVISPDSTHLAYVVKNETGMQVMTNDKAGKLYDQIARGF-----PVFSPQKNRVGYIAT 107

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             GK  + V ++                    +SP G   A+      K    V+  +G+
Sbjct: 108 LAGKNIVVVDKTE--------YPGFDGACCLTFSPDGKSFAYIAQKEGK---QVVLFNGT 156

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                          + P    L +S    G     +     +G+ +  
Sbjct: 157 PHDPFDAIDRQIGLVFGPGSSRLAYSGLDQGRVILVI-----DGKPQER 200


>gi|282898685|ref|ZP_06306673.1| WD40-like protein Beta Propeller protein [Cylindrospermopsis
           raciborskii CS-505]
 gi|281196553|gb|EFA71462.1| WD40-like protein Beta Propeller protein [Cylindrospermopsis
           raciborskii CS-505]
          Length = 184

 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 4/124 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           NT +     + S D   + F S+R G +QL V          I     +E    +P  S 
Sbjct: 42  NTRYTEQDPALSGDGKFLAFVSNRSGSQQLLVYDLQNQGFAPIPGLNRRETIVENPSLSY 101

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  I +      K  I +  +   + ++L       ++ P  SP GR ++F     G  
Sbjct: 102 TGRYICYLTSDRAKPVIALYDRVTKRSQVLTPTYGGWIKNPDISPDGRYIVFQSAGRGQW 161

Query: 415 GSKL 418
             ++
Sbjct: 162 DIEV 165



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 5/127 (3%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSP 311
           N R     P  S +GK       +  +  +   DLQ+     +        I  + S S 
Sbjct: 42  NTRYTEQDPALSGDGKFLAFVSNRSGSQQLLVYDLQNQGFAPIPGLNRRETIVENPSLSY 101

Query: 312 DSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
               I +  SDR  K  + +        + ++        +P  SP G  I F      +
Sbjct: 102 TGRYICYLTSDRA-KPVIALYDRVTKRSQVLTPTYGGWIKNPDISPDGRYIVFQSAGRGQ 160

Query: 371 FAIGVMK 377
           + I V+ 
Sbjct: 161 WDIEVLD 167



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 2/119 (1%)

Query: 216 EPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +P  S + + +A+ +       L VY +  +       +    +++  P  S  G+    
Sbjct: 49  DPALSGDGKFLAFVSNRSGSQQLLVYDLQNQGFAPIPGLNRRETIVENPSLSYTGRYICY 108

Query: 275 SVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                    I   D  +  ++ LT        +   SPD   IVF+S   G+  + V+ 
Sbjct: 109 LTSDRAKPVIALYDRVTKRSQVLTPTYGGWIKNPDISPDGRYIVFQSAGRGQWDIEVLD 167



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 3/107 (2%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S  SG  +  +  +   G         R+ I+  P  S   + + Y T D      V  +
Sbjct: 63  SNRSGSQQLLVYDLQNQGFAPIPGLNRRETIVENPSLSYTGRYICYLTSDRAKP--VIAL 120

Query: 243 DTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             R+ +  + +   +   I  P  S +G+  +         DI  +D
Sbjct: 121 YDRVTKRSQVLTPTYGGWIKNPDISPDGRYIVFQSAGRGQWDIEVLD 167



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 40/114 (35%), Gaps = 9/114 (7%)

Query: 335 GSDQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           G+ + R+   S +   +  DP  S  G  +AF         + V          +   + 
Sbjct: 30  GTGEVRMDIFSVNTRYTEQDPALSGDGKFLAFVSNRSGSQQLLVYDLQNQGFAPIPGLNR 89

Query: 392 ----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDP 440
               ++ P+ S +GR + +           LY   +  R++ L  T   +  +P
Sbjct: 90  RETIVENPSLSYTGRYICYLTSDRAKPVIALYD-RVTKRSQVLTPTYGGWIKNP 142


>gi|298248133|ref|ZP_06971938.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297550792|gb|EFH84658.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 480

 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 62/208 (29%), Gaps = 22/208 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SPN   +A A  D    +        + R      +    +L   +S +G   + +  
Sbjct: 241 TWSPNGAFIASACQDGSVHVWGAADAHLLWRYDASASSGPCSVLG--WSPDGNAIVFAAS 298

Query: 278 -KDEAMDIYSVDLQSNATER-------LTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            K     +   + ++            +T     +   ++SPD +++ F         + 
Sbjct: 299 GKTGKSLLGVWNARTGRVRLQTNADVGVTAQNGKDRRITWSPDGTRMAFGVVNNIGSAID 358

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG---------VMKKDG 380
           V    G  +    +          WSP G  +A   +                 V   D 
Sbjct: 359 VWSLQGGRRLFTCEHVSGQPLYVTWSPDGKYLAAGNYIAGSSEPAQGDNGSRSVVQFWDA 418

Query: 381 SQERLLVEDSNLQAP---TWSPSGRSLI 405
           S  + L   S  + P    WSP  R L 
Sbjct: 419 SSGQALFTYSAPKNPDQLAWSPDSRYLA 446



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 96/285 (33%), Gaps = 44/285 (15%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           +SD ++ +    +G F         +V +G  +    +    G +            +  
Sbjct: 101 LSDSLHIAYASNRGLF-------VVNVENGQRRWQQKIWP--GYDYTST--------WAT 143

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S     VAY        L V  +++  +    R  +F    +A   S +G R   S+ 
Sbjct: 144 SWSKRGTTVAYV---GGAALLVQEVESGQNVWTHRYTSFPERRVA--LSPDGTRIAFSLS 198

Query: 278 KD--------EAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDREGK 325
            D          + ++ V   +  ++  T+     I      ++SP+ + I   + ++G 
Sbjct: 199 PDTTNAAHQPGIVQVWDVQHGTMLSQYPTSLEGQEIARVNDITWSPNGAFIA-SACQDGS 257

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQER 384
             ++         +  +           WSP G+ I F       K  +GV      + R
Sbjct: 258 VHVWGAADAHLLWRYDASASSGPCSVLGWSPDGNAIVFAASGKTGKSLLGVWNARTGRVR 317

Query: 385 L--------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           L          ++   +  TWSP G  + F    +  +   ++S+
Sbjct: 318 LQTNADVGVTAQNGKDRRITWSPDGTRMAFGVVNNIGSAIDVWSL 362



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 78/252 (30%), Gaps = 30/252 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +L  S +    +  +  +   +AYA+     ++ V     R  +     G   +   A  
Sbjct: 86  HLLRSINWDGLDFSWLSDSLHIAYASNRGLFVVNVENGQRRWQQKI-WPGYDYTSTWATS 144

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYSPDSSQIVFESD 321
           +S  G              +   +++S     T R T+     +  + SPD ++I F   
Sbjct: 145 WSKRGTTVAYV----GGAALLVQEVESGQNVWTHRYTSFPERRV--ALSPDGTRIAFSLS 198

Query: 322 REGKEQ------LYVMQSNGSD-----QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            +          + V               +   + A   D  WSP G  IA     G  
Sbjct: 199 PDTTNAAHQPGIVQVWDVQHGTMLSQYPTSLEGQEIARVNDITWSPNGAFIASACQDGS- 257

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             + V     +      + S    P     WSP G +++F+    G TG  L  +     
Sbjct: 258 --VHVWGAADAHLLWRYDASASSGPCSVLGWSPDGNAIVFAAS--GKTGKSLLGVWNART 313

Query: 427 NETLINTPAYAS 438
               + T A   
Sbjct: 314 GRVRLQTNADVG 325


>gi|159900681|ref|YP_001546928.1| hypothetical protein Haur_4168 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159893720|gb|ABX06800.1| hypothetical protein Haur_4168 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 463

 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 80/225 (35%), Gaps = 30/225 (13%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKR 252
           G + +    ++         SP+ +++A   ++D            ++++D       + 
Sbjct: 77  GQHYQLANATQPNAYLPWSASPDGKQLAIVVFNDNHPKIEQIDLAELWVVDVDEQNPRRL 136

Query: 253 IGNFRSMIL---------------APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +    +                  AP +S +GK  +++   ++ +D+Y+VD+ +   +RL
Sbjct: 137 LNLLPTTASDQAPALGRKSALIDQAPVWSHDGKTIMLASAHEQQVDLYAVDVATGTAQRL 196

Query: 298 TNTLFINISASYSPDSSQIVFESDRE-------GKEQLYVMQSNGSDQKRISQDKEASYF 350
           TNT  + ++   S D S + F S          G   + + +   +    I+ D  A   
Sbjct: 197 TNTPDLEVNLELSADGSHLAFASASSFGTGGGWGNPMVQIYRFADASFTPITADPLAMGA 256

Query: 351 DPVWSPQGDLIA-FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
             V      LI  F      + +  V   +      L +    +A
Sbjct: 257 RVVGWLDQQLITQFNSQPDGRASFIVFDANTGAITPLAQAMAFEA 301



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 52/174 (29%), Gaps = 29/174 (16%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS--PDSSQIVFESDREGKEQL 328
             +  +  D ++   S+        +L N    N    +S  PD  Q+      +   ++
Sbjct: 59  SVIFDLPADGSIRAISL---VGQHYQLANATQPNAYLPWSASPDGKQLAIVVFNDNHPKI 115

Query: 329 --------YVMQSNGSDQKRISQDKEASYFD---------------PVWSPQGDLIAFTK 365
                   +V+  +  + +R+      +  D               PVWS  G  I    
Sbjct: 116 EQIDLAELWVVDVDEQNPRRLLNLLPTTASDQAPALGRKSALIDQAPVWSHDGKTIMLAS 175

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKL 418
              ++  +  +       + L    +L+     S  G  L F+      TG   
Sbjct: 176 AHEQQVDLYAVDVATGTAQRLTNTPDLEVNLELSADGSHLAFASASSFGTGGGW 229


>gi|309791739|ref|ZP_07686229.1| Serine/Threonine protein kinase with WD40 repeats [Oscillochloris
           trichoides DG6]
 gi|308226232|gb|EFO79970.1| Serine/Threonine protein kinase with WD40 repeats [Oscillochloris
           trichoides DG6]
          Length = 613

 Score = 70.0 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 98/259 (37%), Gaps = 28/259 (10%)

Query: 182 ESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           + ++SG    ++ + +  DG+ I  L+   +++L    FSP+ + +A           V 
Sbjct: 331 DRLISGGADGTVRLWNISDGSQIAELSGHSERVLGV-AFSPDGRLLA----SGGADKTVR 385

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L           +      + +  FS +    L S   D+ + ++     S+    +   
Sbjct: 386 LWSVSDRAEIACLDAHSGAVASVAFSPD-SSLLASGGADKTVRLWQTS-DSSLVRAIRGQ 443

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY----------- 349
           +      ++SPD   I      +   +++ + ++G  ++ + +                 
Sbjct: 444 MGNVNGLAFSPDGEVIASVITLDSSVRIWRV-ADGRLRQTLREQLRGKAVFAYIEATLLG 502

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFS 407
               +SP GDLI           +  M  DGS  RL+ E     + +  +SP GR++   
Sbjct: 503 AAVAFSPDGDLIVSGGTMDSTIRLWNMN-DGS-LRLIFEGHSGPITSVAYSPDGRTVA-- 558

Query: 408 RKKDGDTGSKLYSIDLNGR 426
                DT  +L+S+  +GR
Sbjct: 559 -SGSADTTVRLWSV-ADGR 575



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 37/114 (32%), Gaps = 6/114 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +      D     + L +                I +  +S +G+    S  
Sbjct: 506 AFSPDGDLIVSGGTMDS---TIRLWNMNDGSLRLIFEGHSGPITSVAYSPDGRTVA-SGS 561

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            D  + ++SV         L          +YSPD   +   S  +G  +++ +
Sbjct: 562 ADTTVRLWSV-ADGRMLHTLEGHSAAVTGIAYSPDRQTLASTSL-DGTIRVWRI 613



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 14/104 (13%), Positives = 39/104 (37%), Gaps = 5/104 (4%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V  G + +++ + + +  ++R +       +    +SP+ + VA  + D      V L  
Sbjct: 515 VSGGTMDSTIRLWNMNDGSLRLIFEGHSGPITSVAYSPDGRTVASGSADT----TVRLWS 570

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
               R    +    + +    +S + +    S   D  + ++ +
Sbjct: 571 VADGRMLHTLEGHSAAVTGIAYSPDRQTLA-STSLDGTIRVWRI 613


>gi|307149684|ref|YP_003890992.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306986750|gb|ADN18627.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 606

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 82/223 (36%), Gaps = 15/223 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG     L V D      ++L    D+IL     SP+ + +A    D +    + + + 
Sbjct: 382 VSGSDLRYLQVWDLLKDETKFLKRHSDRILAV-VISPDGKTLASGGADKK----LNIWNL 436

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
                 + +    S I     SS+GK  L+S   +  +  +  +L++   E+ L   + +
Sbjct: 437 PSGEFRQTLTEEDSAICCLAISSDGK-ILVSSNGNNTIKRW--NLETGKLEKSLGTYMGL 493

Query: 304 NISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               + SP  + +     DR     + V+     +     +      +   +SP G  +A
Sbjct: 494 IWDLAISPAENILACGCRDR----LVKVLNLTTGEMLHQLRGHSKEVYAVAFSPDGQTLA 549

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              F      +  +K       L    S++    +SP GR L+
Sbjct: 550 SGSFDNTV-KLWRVKTGELLCTLTGHQSDVYGVAFSPDGRFLV 591


>gi|170095369|ref|XP_001878905.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164646209|gb|EDR10455.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1472

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 47/337 (13%), Positives = 106/337 (31%), Gaps = 50/337 (14%)

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                    R+WDV    ++                H  S       T             
Sbjct: 1113 SGSYDKSVRVWDVSTGAELKVLN-----------GHMQSITSVAFSTD------------ 1149

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
               +VSG+   S+ V D        +       +    FS +  ++   + D      V 
Sbjct: 1150 GTRMVSGLDDKSVRVWDVSTGTELKVLNGHMSGVSSVAFSTDGTRIISGSCDK----SVR 1205

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTN 299
            + D       K +    + + +  FS++G   + S   D+++ ++  D  +    + L  
Sbjct: 1206 VWDASTGAELKVLNGHINAVTSVTFSTDGTHIV-SGSYDKSVRVW--DASTGAELKVLNG 1262

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             +    S + S D + +V   D      + V  ++   + ++            +S  G 
Sbjct: 1263 HMQSISSVTLSTDGTHMVSGLD---DNSVRVWDASTGAELKVLNGHTGWVQAVAFSTDGT 1319

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG------ 412
             I  +    +   +  +   G++ R+L      + +  +S  G  ++     +       
Sbjct: 1320 CIV-SGSCDKSVRVWDVST-GAELRVLNGHTEAICSVAFSTDGTHIVSGSWDNSVRVWEA 1377

Query: 413  DTGSKLYSIDLNGRNETLINTPA-------YASDPQW 442
             TG+++   +++   +  I +PA           P W
Sbjct: 1378 STGAQVKVPNIHTHPQNSITSPADNTCDTLDDPYPAW 1414



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 94/281 (33%), Gaps = 25/281 (8%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              R+WDV    ++      +S A         S D         G ++  +     S  +
Sbjct: 1023 SVRVWDVSTGAELKVLNGVNSVA--------FSTD---GTRIVSGSWDKSVRVWDVSTGT 1071

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
             +   S+ V D        +       +    FS +   +   +YD      V + D   
Sbjct: 1072 ELKDKSVRVWDVSTGTELKVLNGHMDGVSSVAFSTDGTHIVSGSYDK----SVRVWDVST 1127

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                K +      I +  FS++G R + S   D+++ ++ V       + L   +    S
Sbjct: 1128 GAELKVLNGHMQSITSVAFSTDGTRMV-SGLDDKSVRVWDVS-TGTELKVLNGHMSGVSS 1185

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             ++S D ++I+  S     + + V  ++   + ++      +     +S  G  I    +
Sbjct: 1186 VAFSTDGTRIISGSC---DKSVRVWDASTGAELKVLNGHINAVTSVTFSTDGTHIVSGSY 1242

Query: 367  SGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLI 405
                  + V       E  ++     ++ + T S  G  ++
Sbjct: 1243 DKS---VRVWDASTGAELKVLNGHMQSISSVTLSTDGTHMV 1280



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 103/318 (32%), Gaps = 39/318 (12%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV-SGIIKNSL 193
                I+ +++           H  + D+   I  E       + F ++S        NS+
Sbjct: 839  STGSIMSQQWREKFRGIPSFTHRKASDV-PLIVIEMDASIYSVAFSTDSTHIVTGSDNSV 897

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             V D        L       +    FS +   +   + D      V + D       K +
Sbjct: 898  QVWDASTGAELKLLKGHRASILSVAFSTDGTYIVSGSIDR----SVRVWDVSTGAELKVL 953

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL---FINISASYS 310
                  + +  FS++G   + S   D+++ ++  D  + A  ++ N      I +S ++S
Sbjct: 954  NGHMYWVSSVAFSTDGTHIV-SGSCDKSVRVW--DASTGAELKVLNGHMEVSI-LSVAFS 1009

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-- 368
             D + IVF SD    + + V   +   + ++            +S  G  I    +    
Sbjct: 1010 TDGTHIVFGSD---DKSVRVWDVSTGAELKVLNG----VNSVAFSTDGTRIVSGSWDKSV 1062

Query: 369  -----------EKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTG 415
                       +  ++ V       E  ++      + +  +S  G  ++       D  
Sbjct: 1063 RVWDVSTGTELKDKSVRVWDVSTGTELKVLNGHMDGVSSVAFSTDGTHIVSGSY---DKS 1119

Query: 416  SKLYSIDLNGRNETLINT 433
             +++ +   G    ++N 
Sbjct: 1120 VRVWDVS-TGAELKVLNG 1136



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 111/315 (35%), Gaps = 66/315 (20%)

Query: 110  VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
             +V+G + +          R+WDV    ++                          +   
Sbjct: 929  YIVSGSIDR--------SVRVWDVSTGAEL-------------------------KVLNG 955

Query: 170  KGDFNSRILFVSESV--VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKV 226
               + S + F ++    VSG    S+ V D   GA ++ L    +  +    FS +   +
Sbjct: 956  HMYWVSSVAFSTDGTHIVSGSCDKSVRVWDASTGAELKVLNGHMEVSILSVAFSTDGTHI 1015

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             + + D      V + D       K +    + + +  FS++G R + S   D+++ ++ 
Sbjct: 1016 VFGSDDK----SVRVWDVSTGAELKVL----NGVNSVAFSTDGTRIV-SGSWDKSVRVWD 1066

Query: 287  V--------------DLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVM 331
            V              D+ +    ++ N     +S+ ++S D + IV  S     + + V 
Sbjct: 1067 VSTGTELKDKSVRVWDVSTGTELKVLNGHMDGVSSVAFSTDGTHIVSGSY---DKSVRVW 1123

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDS 390
              +   + ++      S     +S  G  +  +    +   +  +   G++ ++L    S
Sbjct: 1124 DVSTGAELKVLNGHMQSITSVAFSTDGTRMV-SGLDDKSVRVWDVST-GTELKVLNGHMS 1181

Query: 391  NLQAPTWSPSGRSLI 405
             + +  +S  G  +I
Sbjct: 1182 GVSSVAFSTDGTRII 1196



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 105/323 (32%), Gaps = 56/323 (17%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              ++WD     ++   K            H  S             F++   ++    VS
Sbjct: 896  SVQVWDASTGAELKLLK-----------GHRASILSV--------AFSTDGTYI----VS 932

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G I  S+ V D        +       +    FS +   +   + D      V + D   
Sbjct: 933  GSIDRSVRVWDVSTGAELKVLNGHMYWVSSVAFSTDGTHIVSGSCDK----SVRVWDAST 988

Query: 247  DRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                K + G+    IL+  FS++G   +     D+++ ++  D+ + A  ++ N +    
Sbjct: 989  GAELKVLNGHMEVSILSVAFSTDGTHIVF-GSDDKSVRVW--DVSTGAELKVLNGVN--- 1042

Query: 306  SASYSPDSSQIVFESD---------REGKE----QLYVMQSNGSDQKRISQDKEASYFDP 352
            S ++S D ++IV  S            G E     + V   +   + ++           
Sbjct: 1043 SVAFSTDGTRIVSGSWDKSVRVWDVSTGTELKDKSVRVWDVSTGTELKVLNGHMDGVSSV 1102

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKK 410
             +S  G  I    +      + V       E  ++     ++ +  +S  G  ++     
Sbjct: 1103 AFSTDGTHIVSGSYDKS---VRVWDVSTGAELKVLNGHMQSITSVAFSTDGTRMV---SG 1156

Query: 411  DGDTGSKLYSIDLNGRNETLINT 433
              D   +++ +   G    ++N 
Sbjct: 1157 LDDKSVRVWDVS-TGTELKVLNG 1178



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 74/255 (29%), Gaps = 29/255 (11%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             N   L+     I     +S     +    + ++          +    P  +    + I
Sbjct: 820  GNPPALSTPHLYISTLASWS--TGSIMSQQWREKFRGIPSFTHRKASDVPLIVIEMDASI 877

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFE 319
             +  FS++    +        +     D  +    + L       +S ++S D + IV  
Sbjct: 878  YSVAFSTDSTHIVTGSDNSVQVW----DASTGAELKLLKGHRASILSVAFSTDGTYIVSG 933

Query: 320  S-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S DR     + V   +   + ++            +S  G  I           + V   
Sbjct: 934  SIDRS----VRVWDVSTGAELKVLNGHMYWVSSVAFSTDGTHIVSGSCDKS---VRVWDA 986

Query: 379  DGSQERLLVEDS---NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-------LNGRNE 428
                E  ++      ++ +  +S  G  ++F      D   +++ +        LNG N 
Sbjct: 987  STGAELKVLNGHMEVSILSVAFSTDGTHIVFGSD---DKSVRVWDVSTGAELKVLNGVNS 1043

Query: 429  TLINTPA-YASDPQW 442
               +T         W
Sbjct: 1044 VAFSTDGTRIVSGSW 1058


>gi|323451215|gb|EGB07093.1| hypothetical protein AURANDRAFT_3445 [Aureococcus anophagefferens]
          Length = 285

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 11/227 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S    N+  + D     +       +       FSP+ +++   + D        L D  
Sbjct: 68  SSSTDNTCKLWDAFSGELLKTLDGHESFCLSCNFSPDGKRLMTTSDDQ----TAILWDVA 123

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
                 ++      + +  FS +G R +++   D    I+  D  + A    LT      
Sbjct: 124 TGEILHKLEGHTDKVSSGAFSPDGLR-VVTGSLDMTAKIW--DATTGACVSTLTGHSDWI 180

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +   +S D  +IV  S     +   +  S  ++ ++  +  + +     +S    ++   
Sbjct: 181 LKCDWSHDGKRIVTAST---DQTARLWDSERAEFQKEIKGHQGTVTSCAFSKDDKVVVTG 237

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                       + D     L     ++    +S  G  ++ + +  
Sbjct: 238 SLDHTAKLWHSWRTDECIHTLDGHTDHVTCVAFSSDGTCVMTASRDH 284



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 55/171 (32%), Gaps = 31/171 (18%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           R++    D+  +   LWDV   + +   +            HT  D +        G   
Sbjct: 107 RLMTTSDDQTAI---LWDVATGEILHKLE-----------GHT--DKVSSGAFSPDG--- 147

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                    VV+G +  +  + D                + +  +S + +++  A+ D  
Sbjct: 148 -------LRVVTGSLDMTAKIWDATTGACVSTLTGHSDWILKCDWSHDGKRIVTASTDQ- 199

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                 L D+      K I   +  + +  FS +  + +++   D    ++
Sbjct: 200 ---TARLWDSERAEFQKEIKGHQGTVTSCAFSKD-DKVVVTGSLDHTAKLW 246


>gi|270264126|ref|ZP_06192393.1| putative ATP/GTP-binding protein [Serratia odorifera 4Rx13]
 gi|270041775|gb|EFA14872.1| putative ATP/GTP-binding protein [Serratia odorifera 4Rx13]
          Length = 432

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 59/145 (40%), Gaps = 18/145 (12%)

Query: 291 SNATERLT-----NTLFINISAS-Y---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKR 340
                RLT         +  +   +   SPD S I F   D +G  QL+ +  NG + ++
Sbjct: 292 GVRQRRLTFTEGRRYPGVVTAPRHWLRSSPDGSMIAFLMKDDQGVVQLWTVSPNGGEPRQ 351

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPT 396
           I++ +        W PQG  IA    +    ++ + +    + + L +      +  A  
Sbjct: 352 ITRGEHGIQSAFSWHPQGGRIALVCDN----SLMLCEVPSGRMQRLTKRTVLPPSGDAIV 407

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
           +SP G  + F R+ +G +   + ++
Sbjct: 408 FSPDGNQVAFMREVEGFSQIFVATV 432



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 59/167 (35%), Gaps = 17/167 (10%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-----NFRSMILAPR-F---SSNGKRA 272
           +    A A          +L    +    +R+       +  ++ APR +   S +G   
Sbjct: 267 DDADYAKAGSRPLQGTSTHLPAPPLGVRQRRLTFTEGRRYPGVVTAPRHWLRSSPDGSMI 326

Query: 273 LISVQKD-EAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYV 330
              ++ D   + +++V        ++T     I  + S+ P   +I    D      L +
Sbjct: 327 AFLMKDDQGVVQLWTVSPNGGEPRQITRGEHGIQSAFSWHPQGGRIALVCDNS----LML 382

Query: 331 MQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            +      +R+++      S    V+SP G+ +AF +       I V
Sbjct: 383 CEVPSGRMQRLTKRTVLPPSGDAIVFSPDGNQVAFMREVEGFSQIFV 429



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 51/130 (39%), Gaps = 11/130 (8%)

Query: 208 PSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                ++  PR     SP+   +A+   DD+ +++++ +        +       +  A 
Sbjct: 304 RRYPGVVTAPRHWLRSSPDGSMIAFLMKDDQGVVQLWTVSPNGGEPRQITRGEHGIQSAF 363

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFES 320
            +   G R  +         +   ++ S   +RLT    +  S     +SPD +Q+ F  
Sbjct: 364 SWHPQGGRIALVCDNS----LMLCEVPSGRMQRLTKRTVLPPSGDAIVFSPDGNQVAFMR 419

Query: 321 DREGKEQLYV 330
           + EG  Q++V
Sbjct: 420 EVEGFSQIFV 429



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 32/96 (33%), Gaps = 3/96 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +  +G   R +T     I     + P   ++A     D  ++   +   R+ R  K
Sbjct: 338 QLWTVSPNGGEPRQITRGEHGIQSAFSWHPQGGRIALV--CDNSLMLCEVPSGRMQRLTK 395

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           R         A  FS +G +     + +    I+  
Sbjct: 396 R-TVLPPSGDAIVFSPDGNQVAFMREVEGFSQIFVA 430


>gi|271502590|ref|YP_003335616.1| hypothetical protein Dd586_4084 [Dickeya dadantii Ech586]
 gi|270346145|gb|ACZ78910.1| conserved hypothetical protein [Dickeya dadantii Ech586]
          Length = 427

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 60/159 (37%), Gaps = 22/159 (13%)

Query: 279 DEAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQL 328
               D            RLT T       +      +   SPD SQI F   D  G  QL
Sbjct: 273 GGTDDTLPAPPAGVYQRRLTFTADRAYPGVVNQPRHWLRSSPDGSQIAFLMKDDRGIVQL 332

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           + +  NG + ++++           W P GD +AF   +       VM  + +  RL+ +
Sbjct: 333 WTVSPNGGEPRQVTHSDWPIQSAFSWHPDGDSLAFIADNS------VMLCEVATGRLIRQ 386

Query: 389 DSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +  + P       +SP+G  L + R  DG +   + ++
Sbjct: 387 TARSETPPIADAVVFSPNGDRLAYLRDIDGFSQIFVVTV 425



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 51/127 (40%), Gaps = 11/127 (8%)

Query: 212 QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            ++ +PR     SP+  ++A+   DD  I++++ +        +   +   +  A  +  
Sbjct: 301 GVVNQPRHWLRSSPDGSQIAFLMKDDRGIVQLWTVSPNGGEPRQVTHSDWPIQSAFSWHP 360

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDREG 324
           +G              +   ++ +    R T    T  I  +  +SP+  ++ +  D +G
Sbjct: 361 DGDSLAFIADNS----VMLCEVATGRLIRQTARSETPPIADAVVFSPNGDRLAYLRDIDG 416

Query: 325 KEQLYVM 331
             Q++V+
Sbjct: 417 FSQIFVV 423



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 46/140 (32%), Gaps = 16/140 (11%)

Query: 159 SDDIYQSITGEKGDF------NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +D  Y  +  +   +       S+I F+ +          L  +  +G   R +T S   
Sbjct: 295 ADRAYPGVVNQPRHWLRSSPDGSQIAFLMK---DDRGIVQLWTVSPNGGEPRQVTHSDWP 351

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--RSMILAPRFSSNGK 270
           I     + P+   +A+   +      V L +    R  ++        +  A  FS NG 
Sbjct: 352 IQSAFSWHPDGDSLAFIADN-----SVMLCEVATGRLIRQTARSETPPIADAVVFSPNGD 406

Query: 271 RALISVQKDEAMDIYSVDLQ 290
           R       D    I+ V + 
Sbjct: 407 RLAYLRDIDGFSQIFVVTVA 426



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 68/270 (25%), Gaps = 87/270 (32%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---------- 278
               D+D  +   +D  +  AP   G  R       FS +G R   +             
Sbjct: 103 VMVADDDRQQATTLDACVLTAPYLAGALRGGSHVHVFSPDGTRLSFTYNDHVLHERDPAL 162

Query: 279 ------------------------DEAMDIYSVDLQSNATERLTNTLFINISASYS---- 310
                                   D +     V   +      ++ +       +     
Sbjct: 163 DLRNVGVAVPLHRVDAPHRHPREHDGSHYCVLVSHTTPQPRPGSDEINRAYEEGWVGNAG 222

Query: 311 ---PDSSQ----IVFESD----REGK-EQLYVMQ-------------------------- 332
              PD S+    + F  D    R  K   ++++                           
Sbjct: 223 YVRPDGSRQRWALAFIGDTLSARGEKVPDVFIVDLPEKLDDYARPGERPLGGTDDTLPAP 282

Query: 333 SNGSDQKRISQDKEASY--------FDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQE 383
             G  Q+R++   + +Y             SP G  IAF          +  +  +G + 
Sbjct: 283 PAGVYQRRLTFTADRAYPGVVNQPRHWLRSSPDGSQIAFLMKDDRGIVQLWTVSPNGGEP 342

Query: 384 RLLVEDSN--LQAPTWSPSGRSLIFSRKKD 411
           R +         A +W P G SL F     
Sbjct: 343 RQVTHSDWPIQSAFSWHPDGDSLAFIADNS 372


>gi|167630801|ref|YP_001681300.1| hypothetical protein HM1_2760 [Heliobacterium modesticaldum Ice1]
 gi|167593541|gb|ABZ85289.1| hypothetical protein HM1_2760 [Heliobacterium modesticaldum Ice1]
          Length = 466

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 43/231 (18%), Positives = 81/231 (35%), Gaps = 24/231 (10%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A A+Y         +  T   ++ +          +  FS+  +R   + +      +Y 
Sbjct: 74  ALASYTVRTPGLGDVKPTPEKKSSESAAKDEVQWSSITFSNKKERMAFTTRNG----LYV 129

Query: 287 VDLQSNA---TERLTNTLFINISAS--YSPDSSQIVFES------DREGKEQLYVMQSNG 335
           V+++S       RL+         +  +SPD S + F +      D      + + + N 
Sbjct: 130 VNMKSRQAIRLHRLSPEDGTEFFPAIAWSPDDSMVTFGTVTRPKGDGSATYTISLARVND 189

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            D K I Q  +     PVWSP    IA          + + +        +   ++L++P
Sbjct: 190 GDVKNIHQSDKRPNL-PVWSPDDKYIALDN------PLFIYEVKSQNRTPVGMGADLRSP 242

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVGF 445
            WSP    LIFS+    +   ++Y      R    +        P  W+ +
Sbjct: 243 RWSPDSSYLIFSQYTSPER-CEIYRYSPETREMLQMTDLGKTVAPVAWLKY 292



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 79/226 (34%), Gaps = 23/226 (10%)

Query: 156 HTISDD----IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           H +S +     + +I     D       V+     G    ++ +   +  +++ +  S  
Sbjct: 141 HRLSPEDGTEFFPAIAWSPDDSMVTFGTVTRPKGDGSATYTISLARVNDGDVKNIHQSDK 200

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +    P +SP+ + +A      ++ L +Y + ++         + R    +PR+S +   
Sbjct: 201 RPNL-PVWSPDDKYIA-----LDNPLFIYEVKSQNRTPVGMGADLR----SPRWSPDSSY 250

Query: 272 ALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------SDRE 323
            + S     E  +IY    ++    ++T+        ++    S I+ E       SD  
Sbjct: 251 LIFSQYTSPERCEIYRYSPETREMLQMTDLGKTVAPVAWLKYPSTIIMETEVTANGSDTG 310

Query: 324 GKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSG 368
                 V   + S  + ++  D   S      SP   LI   +F  
Sbjct: 311 RHHVGEVRPHSESSIRWLTSFDSAESNRFLCASPNERLIIMRQFQP 356


>gi|163840760|ref|YP_001625165.1| acylamino-acid-releasing enzyme [Renibacterium salmoninarum ATCC
           33209]
 gi|162954236|gb|ABY23751.1| acylamino-acid-releasing enzyme [Renibacterium salmoninarum ATCC
           33209]
          Length = 677

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 15/141 (10%)

Query: 260 ILAPRFSSNGKRALISVQKD--------EAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           + AP     G  A+++V +           +  +S D  S++  R T   F + +  YSP
Sbjct: 19  VSAPTLHPEGVTAIVAVSRADFDADSYVGQLWQFSTD-DSSSPRRFTRG-FRDSAPQYSP 76

Query: 312 DSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           D + + F     GK  Q++++ + G + + I+ D++ S  +  WSP G+ I F     E+
Sbjct: 77  DGAVLAFMRSAPGKAGQIHIVDARGGEPQTIT-DRKLSVNEFSWSPGGNQIVFAAAVPEE 135

Query: 371 FAIGVMKKDGS---QERLLVE 388
              G +   G+     RL+  
Sbjct: 136 GRYGTIDGVGASAEDPRLITS 156



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 92/260 (35%), Gaps = 47/260 (18%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D ++ R  T         P++SP+   +A+         +++++D R    P+ I + + 
Sbjct: 56  DSSSPRRFTRG--FRDSAPQYSPDGAVLAFMRSAPGKAGQIHIVDAR-GGEPQTITDRKL 112

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYSPDSSQ 315
            +    +S  G + + +    E     ++D    +      +T+  +    A ++ D   
Sbjct: 113 SVNEFSWSPGGNQIVFAAAVPEEGRYGTIDGVGASAEDPRLITSYKYRMNGAGFTQDQLS 172

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            +F  D                         +   +P+  PQG   A  +  G K    V
Sbjct: 173 QIFTVD-----------------------VPSVDAEPLVEPQGR--AKKQAEGGKSFKAV 207

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK--KDGDTGSKLYSIDLNG---RNETL 430
            +      +L  + +    P +S  G S+ +  +     D  ++L+ + + G   +    
Sbjct: 208 PEA----VQLTKDAAEHSNPRFSADGLSIYYLAEPLDSVDLLTELWQLPVGGDQPKQLER 263

Query: 431 INTPA-------YASDPQWV 443
           ++ P         ++D +W+
Sbjct: 264 VSQPGLSFYGSIESADGRWL 283



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 102/296 (34%), Gaps = 37/296 (12%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
             ++    +      + ++D  G   + +T  +  +     +SP   ++ +A    E+  
Sbjct: 79  AVLAFMRSAPGKAGQIHIVDARGGEPQTITDRKLSVNEF-SWSPGGNQIVFAAAVPEEGR 137

Query: 238 RVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
              +         P+ I +++  +    F+ +    + +V          V+ Q  A + 
Sbjct: 138 YGTIDGVGASAEDPRLITSYKYRMNGAGFTQDQLSQIFTVDVPSVDAEPLVEPQGRAKKQ 197

Query: 296 --------------RLTNTLFINISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSD 337
                         +LT     + +  +S D   I + ++     +   +L+ +   G  
Sbjct: 198 AEGGKSFKAVPEAVQLTKDAAEHSNPRFSADGLSIYYLAEPLDSVDLLTELWQLPVGGDQ 257

Query: 338 QKRISQDKEA--SYFDPVWSPQGDLI-AFTKFSGEKFA--------IGVMKKDG-SQERL 385
            K++ +  +   S++  + S  G  + A    +G +          + V   DG S    
Sbjct: 258 PKQLERVSQPGLSFYGSIESADGRWLFALGSETGSEGKDFVGVQGGVYVRALDGSSDWTR 317

Query: 386 LVEDSNLQAPTWSP---SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           L +D        +P   SG   + + ++      +L+ I  +G    L++  +  S
Sbjct: 318 LTDDREQDFGDSAPLTRSGADSVLAIERH-RGAERLWQIKADGTAALLLDNQSVVS 372



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 9/106 (8%)

Query: 347 ASYFDPVWSPQG-DLIAFTKFSGEKFAIGVMKK------DGSQERLLVEDSNLQAPTWSP 399
            +   P   P+G   I     +       V +       D S  R         AP +SP
Sbjct: 17  RTVSAPTLHPEGVTAIVAVSRADFDADSYVGQLWQFSTDDSSSPRRFTRGFRDSAPQYSP 76

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
            G  L F R   G  G +++ +D   G  +T+ +     ++  W  
Sbjct: 77  DGAVLAFMRSAPGKAG-QIHIVDARGGEPQTITDRKLSVNEFSWSP 121


>gi|172035654|ref|YP_001802155.1| WD40-like beta-propeller protein [Cyanothece sp. ATCC 51142]
 gi|171697108|gb|ACB50089.1| WD40-like beta-propeller protein [Cyanothece sp. ATCC 51142]
          Length = 227

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 9/134 (6%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS--- 306
           P    N R     P  S +G+   +   ++ + +I   DL+    E   +   +N S   
Sbjct: 79  PSATLNSRYNDQQPALSGDGRWLALVSNRNNSNEILLYDLR---RETFIDLPGLNQSNVI 135

Query: 307 ---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               S S     +V+ S  +G+  + +        + ++Q       +P  S  G  I F
Sbjct: 136 LESPSLSRTGRYLVYISSVQGRPDVALYDRATRRAELLTQGYRNWVRNPQISADGRYIVF 195

Query: 364 TKFSGEKFAIGVMK 377
                 ++ I V+ 
Sbjct: 196 ETARRGQWDIEVLD 209



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 42/124 (33%), Gaps = 4/124 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSP 356
           N+ + +   + S D   +   S+R    ++ +          +    +++     P  S 
Sbjct: 84  NSRYNDQQPALSGDGRWLALVSNRNNSNEILLYDLRRETFIDLPGLNQSNVILESPSLSR 143

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDT 414
            G  + +      +  + +  +   +  LL +        P  S  GR ++F   + G  
Sbjct: 144 TGRYLVYISSVQGRPDVALYDRATRRAELLTQGYRNWVRNPQISADGRYIVFETARRGQW 203

Query: 415 GSKL 418
             ++
Sbjct: 204 DIEV 207



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 8/106 (7%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNL--QAPTW 397
           + +   +   P  S  G  +A          I +          L  +  SN+  ++P+ 
Sbjct: 82  TLNSRYNDQQPALSGDGRWLALVSNRNNSNEILLYDLRRETFIDLPGLNQSNVILESPSL 141

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYASDPQ 441
           S +GR L++     G     LY  D   R   L+      +  +PQ
Sbjct: 142 SRTGRYLVYISSVQGRPDVALY--DRATRRAELLTQGYRNWVRNPQ 185



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 1/82 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               + IL  P  S   + + Y +        V L D    RA      +R+ +  P+ S
Sbjct: 129 LNQSNVILESPSLSRTGRYLVYISSVQGRP-DVALYDRATRRAELLTQGYRNWVRNPQIS 187

Query: 267 SNGKRALISVQKDEAMDIYSVD 288
           ++G+  +    +    DI  +D
Sbjct: 188 ADGRYIVFETARRGQWDIEVLD 209


>gi|170077263|ref|YP_001733901.1| WD-40-like beta propeller repeat-containing protein [Synechococcus
           sp. PCC 7002]
 gi|169884932|gb|ACA98645.1| WD40-like Beta Propeller Repeat [Synechococcus sp. PCC 7002]
          Length = 171

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 3/118 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFE 319
           PR S  G+  + S  + +   I+  DL       L      N+       S +   IV+ 
Sbjct: 43  PRLSDEGRYLVFSSDRRQQRRIFLYDLAQRKLLPLPGLNQPNVFYDQPDISRNGRFIVYT 102

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           S++EGK  +Y+        + +++       +P  S  G  +AF      ++ I V+ 
Sbjct: 103 SEQEGKTNIYLYDRQAFQSQNLTRTYIGQVRNPTVSGDGRWVAFEGDRTGQWDIEVID 160



 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 4/126 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSP 356
           N+L    +   S +   +VF SDR  + ++++          +    + + F   P  S 
Sbjct: 35  NSLHSEKNPRLSDEGRYLVFSSDRRQQRRIFLYDLAQRKLLPLPGLNQPNVFYDQPDISR 94

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  I +T     K  I +  +   Q + L       ++ PT S  GR + F   + G  
Sbjct: 95  NGRFIVYTSEQEGKTNIYLYDRQAFQSQNLTRTYIGQVRNPTVSGDGRWVAFEGDRTGQW 154

Query: 415 GSKLYS 420
             ++  
Sbjct: 155 DIEVID 160



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 14/107 (13%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSL 404
           +P  S +G  + F+    ++  I +     +Q +LL      Q       P  S +GR +
Sbjct: 42  NPRLSDEGRYLVFSSDRRQQRRIFLYDL--AQRKLLPLPGLNQPNVFYDQPDISRNGRFI 99

Query: 405 IFSRKKDGDTGSKLY------SIDLNGRNETLINTPAYASDPQWVGF 445
           +++ +++G T   LY      S +L       +  P  + D +WV F
Sbjct: 100 VYTSEQEGKTNIYLYDRQAFQSQNLTRTYIGQVRNPTVSGDGRWVAF 146



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 37/109 (33%), Gaps = 5/109 (4%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYL----TPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V S   +    +   D A  + L        +    +P  S N + + Y +  +     +
Sbjct: 53  VFSSDRRQQRRIFLYDLAQRKLLPLPGLNQPNVFYDQPDISRNGRFIVYTSEQEGKT-NI 111

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           YL D +  ++      +   +  P  S +G+       +    DI  +D
Sbjct: 112 YLYDRQAFQSQNLTRTYIGQVRNPTVSGDGRWVAFEGDRTGQWDIEVID 160


>gi|120600324|ref|YP_964898.1| peptidase S9 prolyl oligopeptidase [Shewanella sp. W3-18-1]
 gi|120560417|gb|ABM26344.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sp. W3-18-1]
          Length = 826

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 78/226 (34%), Gaps = 13/226 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++  +A    ++          T   R  + + ++     A ++  +G +  + ++  + 
Sbjct: 337 DEDVLAKVKTENAKAKGETYQSTLAPRKIQLMQDWGWTQSAIQWHESGAKVALMLEATDN 396

Query: 282 MDIYSVDLQSNATERLTNTLFINISAS--------YSPDSSQIVFESDREGKEQLYVMQS 333
            D +   +  +  + +T     + +          + P +  + + S+  G  QLY+   
Sbjct: 397 KDRWIASVDLSKGKFITEHRLHDDAWVNYDYNQFGWVPGTDTLYYLSEETGYSQLYIKSL 456

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSN 391
            G   + ++Q K     D   SP    I +         + +  +     +   L +   
Sbjct: 457 -GEKPRALTQGKFV-VSDITLSPDASFIYYKANQNHPGIYNVHRVNISTGKNEQLTQWDG 514

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               + SP G  L+ +  +      +LY   + G  + L +  + A
Sbjct: 515 NLDYSLSPDGTKLLLNASRRTQPN-ELYIQSIGGELKQLTSYTSDA 559



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 65/173 (37%), Gaps = 13/173 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSR-------DQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
               +   D +  +++T  R       +    +  + P    + Y + +        L  
Sbjct: 397 KDRWIASVDLSKGKFITEHRLHDDAWVNYDYNQFGWVPGTDTLYYLSEETG---YSQLYI 453

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
             +   P+ +   + ++     S +         ++     +++ V++ +   E+LT   
Sbjct: 454 KSLGEKPRALTQGKFVVSDITLSPDASFIYYKANQNHPGIYNVHRVNISTGKNEQLTQWD 513

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             N+  S SPD ++++  + R  +     +QS G + K+++     ++ +  W
Sbjct: 514 G-NLDYSLSPDGTKLLLNASRRTQPNELYIQSIGGELKQLTSYTSDAFKNYPW 565


>gi|113475316|ref|YP_721377.1| WD-40 repeat-containing serine/threonine protein kinase
           [Trichodesmium erythraeum IMS101]
 gi|110166364|gb|ABG50904.1| serine/threonine protein kinase with WD40 repeats [Trichodesmium
           erythraeum IMS101]
          Length = 630

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 95/293 (32%), Gaps = 69/293 (23%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + + D              +    FSP+ + +A  + D      + L + +
Sbjct: 347 SGSEDETIKLWEVDSGREILTIRGHSGYVNSVAFSPDGKILASGSDDK----TIRLWEVQ 402

Query: 246 IDRAPKRIGNFR--------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ------S 291
             +    +G++           + A  F  +GK    S  KD+ + ++ +          
Sbjct: 403 TGKLLCILGDWGRGEYFGHSGGVTAIAFHPDGKSLA-SASKDKNVKVWRLGDDIYDPNYG 461

Query: 292 NATERLTNTLFINISASYSPDSS------------------------------------Q 315
                LT  L    + ++SPD                                       
Sbjct: 462 RVIMTLTGHLQQVRAIAFSPDGKTLASGSQDNMIKIWDLSLGNTVKNLCHYYQGTHYIYT 521

Query: 316 IVFESD-----REGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + F +D       G+++ + + +    +  +I +   +     V+SPQGD+IA     G 
Sbjct: 522 VAFSTDGKVLASGGRDRNIKIWEIESGEILKILEGHSSDIRQVVFSPQGDIIASGSEDGT 581

Query: 370 KFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              I +      QE   L+     + + T+S  G+SL        D   +++ 
Sbjct: 582 ---IKIWDGKTGQEIGNLVGHSKYINSVTFSRDGKSLA---SGSSDNTIRIWR 628


>gi|16330230|ref|NP_440958.1| beta transducin-like-protein [Synechocystis sp. PCC 6803]
 gi|3025122|sp|P73594|Y1409_SYNY3 RecName: Full=Uncharacterized WD repeat-containing protein slr1409
 gi|1652718|dbj|BAA17638.1| beta transducin-like protein [Synechocystis sp. PCC 6803]
          Length = 326

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 50/236 (21%), Positives = 99/236 (41%), Gaps = 25/236 (10%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDG--ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +  + E +V+  +K S  V+++ G   N+       D  +    FSP+ Q +  A  D 
Sbjct: 12  SLFLIKEEIVTAEVKVSAPVVNQSGIKLNLERQFTGSDVAINRIHFSPDGQFLLTAAADG 71

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                   + T   +  + +G  +     +   R S + ++ LI+   D  + ++++  +
Sbjct: 72  --------VGTLWTKEGEMLGQLQGQKPPMFNARLSPD-RQILITTGYDGTIRLWNLQGE 122

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
               ++          A +SPDS  IV  SD +G+ +++  Q     Q+  S  K  +  
Sbjct: 123 LLEEQQ--PHRAAVADAIFSPDSQIIVTCSD-DGQTKIFTRQ----GQEIASVLKSGTAR 175

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLI 405
           +  + PQG LIA    SG    + ++  +G  ER +      +    +SP+G  L+
Sbjct: 176 NLAYHPQGLLIASVSDSGS---LHLINPNGKIEREISTGQGRINNVNFSPNGEQLL 228



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 94/252 (37%), Gaps = 17/252 (6%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            +   FN+R+    + +++     ++ + +  G  +    P R  +  +  FSP+ Q + 
Sbjct: 89  QKPPMFNARLSPDRQILITTGYDGTIRLWNLQGELLEEQQPHRAAVA-DAIFSPDSQIIV 147

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D     +++    +   +  + G  R++   P       + L+     ++  ++ +
Sbjct: 148 TCSDD--GQTKIFTRQGQEIASVLKSGTARNLAYHP-------QGLLIASVSDSGSLHLI 198

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +        ++       + ++SP+  Q++  S   G  +L+     G            
Sbjct: 199 NPNGKIEREISTGQGRINNVNFSPNGEQLL-TSGINGSAKLW--NLAGELIHEYKVVPTG 255

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIF 406
                 + P+G+ +A     G    I   +KDG     L + ++ L + ++SP G+ L  
Sbjct: 256 WVNSAQFYPKGEWLATASDDGT---IRFWQKDGQLIYELPLVNARLTSLSFSPDGKQLAA 312

Query: 407 SRKKDGDTGSKL 418
           +  +       L
Sbjct: 313 TSSQGQVWVFNL 324


>gi|309790707|ref|ZP_07685257.1| WD-40 repeat protein [Oscillochloris trichoides DG6]
 gi|308227238|gb|EFO80916.1| WD-40 repeat protein [Oscillochloris trichoides DG6]
          Length = 774

 Score = 70.0 bits (170), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 91/301 (30%), Gaps = 33/301 (10%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G++  S     R +   ++D              + + F  +          L V   DG
Sbjct: 445 GERLASVADDDRLLVWRVADGAEVGSLRPLSGRVTGLAFSPDGEG-------LAVSGADG 497

Query: 201 A----------NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           A            +         +    FS +  ++  A  D      V        +  
Sbjct: 498 AVSLYPLYQASGPQRQYHDHRGPVGSIVFSGDGTRLLSAASDR----SVRDYQIATGQCR 553

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASY 309
             +          + +  G+    S   +  + I+ +D       R+            +
Sbjct: 554 ILLQTH-GPNHGAQLAPGGQWLA-SSDGEATVQIWQLDASGGQFWRVLRGLRGRPGLLGF 611

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSD--QKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           SPD+ ++   S  +G  Q++ + +  +D   + +            +SP G  +A T  +
Sbjct: 612 SPDAQRLA-ISVEDGSLQIWHLDAGAADLHPQTVLVGLAGRVRSLAFSPDGSSLA-TGCA 669

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +  I  ++    +  L           +SP GRSL       GD+  ++    L G+ 
Sbjct: 670 TGQVQIWQVQNASLRSTLGGPGPACVGVAFSPDGRSLAV-----GDSSGRILVWALAGKQ 724

Query: 428 E 428
            
Sbjct: 725 R 725



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 15/200 (7%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D        SP  + +A A  D      ++L D        +I N  S +LA  FS + +
Sbjct: 218 DCPTRHAALSPTGRLLALAAGDH-----IWLWDLHDGSLRNQIQNAGSSVLALAFSPD-E 271

Query: 271 RALISVQKDEAMDIY-----SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
             L+S   D  + ++      +D  +     L       +S ++SPD S +      +  
Sbjct: 272 HYLLSASDDRCVALWRTGNDVLDRATPLLATLPPHPDQVLSLAFSPDGSLLA-CGGADRS 330

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            +++ M  + S  + +S     +     +SP G+L+A     G    +  +        L
Sbjct: 331 VRIWRM-LDRSLVQTLS-GHGGAVETLAFSPDGNLLAAGSR-GRSLRLWRVASWRLLHSL 387

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
              +  ++   WSP G+ + 
Sbjct: 388 DGHNGAVETLAWSPDGQLVA 407



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 81/264 (30%), Gaps = 19/264 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    S+ +      ++          +    FSP+   +A           + L     
Sbjct: 325 GGADRSVRIWRMLDRSLVQTLSGHGGAVETLAFSPDGNLLA----AGSRGRSLRLWRVAS 380

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    +      +    +S +G + + S   D+ + ++ V   +     L       + 
Sbjct: 381 WRLLHSLDGHNGAVETLAWSPDG-QLVASGASDQTLRVWQV-KNAALVRSLNAHSGAIMG 438

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+ P   ++   +D    ++L V +     +    +          +SP G+ +A +  
Sbjct: 439 VSFCPQGERLASVAD---DDRLLVWRVADGAEVGSLRPLSGRVTGLAFSPDGEGLAVSGA 495

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            G      + +  G Q +       + +  +S  G  L+ +         ++      G+
Sbjct: 496 DGAVSLYPLYQASGPQRQYHDHRGPVGSIVFSGDGTRLLSAASDRSVRDYQI----ATGQ 551

Query: 427 NETLINTPAY------ASDPQWVG 444
              L+ T         A   QW+ 
Sbjct: 552 CRILLQTHGPNHGAQLAPGGQWLA 575



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 56/195 (28%), Gaps = 13/195 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G     +  +D  G     +            FSP+ Q++A +  D    +       
Sbjct: 577 SDGEATVQIWQLDASGGQFWRVLRGLRGRPGLLGFSPDAQRLAISVEDGSLQIWHLDAGA 636

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                   +      + +  FS +G     +      + I+ V   S  +  L       
Sbjct: 637 ADLHPQTVLVGLAGRVRSLAFSPDGSSLA-TGCATGQVQIWQVQNASLRST-LGGPGPAC 694

Query: 305 ISASYSPDSSQIVFESDREGKEQLYV----------MQSNGSDQKRISQDKEASYFDPVW 354
           +  ++SPD   +    D  G+  ++           M+ N     R             +
Sbjct: 695 VGVAFSPDGRSLA-VGDSSGRILVWALAGKQRGKNEMRRNEPSLLRQIPGHAGEVSHLAY 753

Query: 355 SPQGDLIAFTKFSGE 369
           +P GDL+      G 
Sbjct: 754 NPSGDLLVSGSSDGT 768


>gi|146292907|ref|YP_001183331.1| peptidase S9 prolyl oligopeptidase [Shewanella putrefaciens CN-32]
 gi|145564597|gb|ABP75532.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella putrefaciens CN-32]
          Length = 687

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 90/292 (30%), Gaps = 69/292 (23%)

Query: 218 RFSPNQQKVAY----ATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             S +  K+ Y         E    +YL+D T+ +  P ++ +         F+++ K  
Sbjct: 46  TVSHDGTKLVYGLKTVNEKGEASSDLYLLDLTQANAKPLQLTSAAGTEHDVSFANDDKSI 105

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------------- 317
                ++ +  ++ + L      ++++      S   S D+ QIV               
Sbjct: 106 YFLASRNGSSQLFQLPLTGGEAVQVSDLPLDIDSYKLSNDAKQIVLSMRVFPECKDLACS 165

Query: 318 ---FESDREGK----------------------EQLYVMQSNGSDQKRISQDKEASYFDP 352
              F ++ E K                        L+V   NG    ++    +    + 
Sbjct: 166 KDKFTAESERKSTGREYKQLMVRHWDTWEDHARNHLFVGALNGEKLTKVVDITQGLDTET 225

Query: 353 -----------VWSPQGDLIAFTKFSG-------EKFAIGVMKKDGSQERLLVEDSNLQA 394
                       ++P G  + ++  +          + +  +   G     L +D+    
Sbjct: 226 PPKPFSGMEEVTFTPDGKYVVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWD 285

Query: 395 --PTWSPSGRSLIFSRKKDGDTGSKLYSI---DLNGRNETLINTPAYASDPQ 441
             PT+S  GR + +   K     +  Y+I   D N      +  P +   P 
Sbjct: 286 AQPTFSSDGRYMAYLAMKKPGFEADRYAIMLRDTNTGQSKEVA-PLWDRSPS 336



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 42/337 (12%), Positives = 109/337 (32%), Gaps = 80/337 (23%)

Query: 175 SRILFVSESVV-SGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
           +++++  ++V   G   + L ++D   AN + L   S      +  F+ + + + +    
Sbjct: 52  TKLVYGLKTVNEKGEASSDLYLLDLTQANAKPLQLTSAAGTEHDVSFANDDKSIYFLASR 111

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------- 277
           +                  ++ +    I + + S++ K+ ++S++               
Sbjct: 112 NGS--SQLFQLPLTGGEAVQVSDLPLDIDSYKLSNDAKQIVLSMRVFPECKDLACSKDKF 169

Query: 278 -------------------------KDEAMDIYSVDLQSNATER---LTNTLFINISA-- 307
                                          ++   L      +   +T  L        
Sbjct: 170 TAESERKSTGREYKQLMVRHWDTWEDHARNHLFVGALNGEKLTKVVDITQGLDTETPPKP 229

Query: 308 -------SYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQKRISQDKEASYFDPV 353
                  +++PD   +V+ +    K+Q +    +       G     +++D  A    P 
Sbjct: 230 FSGMEEVTFTPDGKYVVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPT 289

Query: 354 WSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLI 405
           +S  G  +A+       F  +++AI +   +  Q + +    + ++P+   + P  R+L 
Sbjct: 290 FSSDGRYMAYLAMKKPGFEADRYAIMLRDTNTGQSKEVAPLWD-RSPSSLMFGPDNRTLY 348

Query: 406 FSRKKDGDTG--------SKLYSIDLNGRNETLINTP 434
            + +  G             + SI  +G N  +  T 
Sbjct: 349 VTAQDMGQVSIFQINTQFGDVQSIYSDGTNSLIAVTN 385



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 63/184 (34%), Gaps = 8/184 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G +            +      L  +   G     LT        +P FS + 
Sbjct: 235 EVTFTPDGKYVVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPTFSSDG 294

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D   + L DT   ++ +    +     +  F  + +   ++ Q  
Sbjct: 295 RYMAYLAMKKPGFEADRYAIMLRDTNTGQSKEVAPLWDRSPSSLMFGPDNRTLYVTAQDM 354

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
             + I+ ++ Q    + +        ++  +  + Q++F+S    +   LY + ++G   
Sbjct: 355 GQVSIFQINTQFGDVQSI---YSDGTNSLIAVTNDQLIFDSKTLVEPGDLYSITTDGQGL 411

Query: 339 KRIS 342
           KR++
Sbjct: 412 KRLT 415


>gi|171911147|ref|ZP_02926617.1| probable vegetatible incompatibility protein HET-E-1
           [Verrucomicrobium spinosum DSM 4136]
          Length = 1725

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 79/242 (32%), Gaps = 22/242 (9%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG+ I        + + +  FSP+  ++A A      +  + + D    +         
Sbjct: 186 ADGSGIEARLVGLSERIQKVAFSPDGSRLAVAGGSPGRMGEIQVWDVAKRKLEVSASITF 245

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQ 315
             +    +S +GK             + +++  +     L      +      +S D S 
Sbjct: 246 DTLYGASWSPDGKLIAF---GGADNSLRAIEAATGKEV-LFTGSANDWVLDTVWSKDGSH 301

Query: 316 IV-FESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           ++    D   K      +    +   I+    +         PQ D I      G     
Sbjct: 302 VMGAGRDMSAKLTEVATKRFVDNITSITPGALKGGMHAVTRHPQRDEILIGGADGVPQIY 361

Query: 374 GVMKKDGSQERLLVEDSNL--QAPT---------WSPSGRSLIFSRKKDGDTGSKLYSID 422
            V ++    +R++ +++NL  + P          +SP G+ +      +G  G  LYS +
Sbjct: 362 RVFRET---KRVIGDNANLIRRFPAVEGRIFTVDYSPDGKVIACGSSYEGRGGVTLYSAE 418

Query: 423 LN 424
            +
Sbjct: 419 FD 420



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 52/145 (35%), Gaps = 16/145 (11%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  Y+PD   I       G  ++ + +++GS  +              +SP G  +A  
Sbjct: 162 TSLDYAPDGKLIA----VAGYHEVLLHRADGSGIEARLVGLSERIQKVAFSPDGSRLAVA 217

Query: 365 KFSGEKF-AIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             S  +   I V      +  +   +  D+   A +WSP G+ + F     G   + L +
Sbjct: 218 GGSPGRMGEIQVWDVAKRKLEVSASITFDTLYGA-SWSPDGKLIAF-----GGADNSLRA 271

Query: 421 IDLNGRNETLINTPA--YASDPQWV 443
           I+     E L    A  +  D  W 
Sbjct: 272 IEAATGKEVLFTGSANDWVLDTVWS 296



 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 15/103 (14%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            ++P G LIA          + + + DGS    RL+     +Q   +SP G  L  +   
Sbjct: 165 DYAPDGKLIAVA----GYHEVLLHRADGSGIEARLVGLSERIQKVAFSPDGSRLAVAGGS 220

Query: 411 DGDTGSKLYSIDLNGRNETL--------INTPAYASDPQWVGF 445
            G  G ++   D+  R   +        +   +++ D + + F
Sbjct: 221 PGRMG-EIQVWDVAKRKLEVSASITFDTLYGASWSPDGKLIAF 262


>gi|32475032|ref|NP_868026.1| tolB protein [precursor] [Rhodopirellula baltica SH 1]
 gi|32445572|emb|CAD75573.1| similar to tolB protein [precursor] [Rhodopirellula baltica SH 1]
          Length = 312

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 57/304 (18%), Positives = 97/304 (31%), Gaps = 51/304 (16%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQIL-----FEPRFSPNQQKVAYATY-----DDE 234
            +   +  L V   DG  IR L   +           P  SP+ ++VAY  +     D +
Sbjct: 3   PTKPNRLILHVCKMDGTPIRPLVADKAIRHDLDRQGTPNVSPDGKRVAYDAWSTTPTDPD 62

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-----VQKDE--AMDIYSV 287
              RV + D         I  +      P F+ + KR ++S      + D      I+ V
Sbjct: 63  RGPRVCVCDLDGKNFIDVIDGY-----MPSFAPDNKRLVVSRPAEYAKADGAKGQSIWIV 117

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKE------QLY---------V 330
           +  +   + + +         +S D + I+F+   D  G        ++Y         +
Sbjct: 118 NCDTKEKKLIADQGAW--GGRWSADGATILFQGGVDENGDPVPKSCLRVYDVAAEKPSLL 175

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
               GS  + IS     S  D   +  G LIA         A  +M  D   + +++   
Sbjct: 176 FPPEGSPFQEISYHFAWSKSDRRLAIGGRLIAGLGEGAPSSATVIMNADKGPDSVIIMLP 235

Query: 391 NLQAPT--------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYASDP 440
                         W P G+S++ +   D        S D      T    P      DP
Sbjct: 236 PANGARVFDGLSLDWHPDGKSILSTGMVDNRFVPVGLSTDGTASEITFSGIPDSVNVRDP 295

Query: 441 QWVG 444
            +  
Sbjct: 296 AYSP 299



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 87/260 (33%), Gaps = 44/260 (16%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------YATYDDE 234
           S +         +CV D DG N   +        + P F+P+ +++       YA  D  
Sbjct: 55  STTPTDPDRGPRVCVCDLDGKNFIDVIDG-----YMPSFAPDNKRLVVSRPAEYAKADGA 109

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------IYSVD 288
               +++++   D   K++   +      R+S++G   L     DE  D      +   D
Sbjct: 110 KGQSIWIVN--CDTKEKKLIADQGAWGG-RWSADGATILFQGGVDENGDPVPKSCLRVYD 166

Query: 289 LQSNATERLTNTLF-----INISASYSPDSSQIVFESDR------EGKE--QLYVMQSNG 335
           + +     L          I+   ++S    ++     R      EG       +M ++ 
Sbjct: 167 VAAEKPSLLFPPEGSPFQEISYHFAWSKSDRRLA-IGGRLIAGLGEGAPSSATVIMNADK 225

Query: 336 SDQKRISQDKEASYFDP------VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
                I     A+           W P G  I  T     +F    +  DG+   +    
Sbjct: 226 GPDSVIIMLPPANGARVFDGLSLDWHPDGKSILSTGMVDNRFVPVGLSTDGTASEITFSG 285

Query: 388 --EDSNLQAPTWSPSGRSLI 405
             +  N++ P +SP G  LI
Sbjct: 286 IPDSVNVRDPAYSPDGNHLI 305



 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 62/185 (33%), Gaps = 26/185 (14%)

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP-----------ASW 151
           W++ GA +L  G V + G    +   R++DV   K  +      SP            S 
Sbjct: 137 WSADGATILFQGGVDENGDPVPKSCLRVYDVAAEKPSLLFPPEGSPFQEISYHFAWSKSD 196

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R++A      I   +    G+       V  +   G     + +   +GA +       D
Sbjct: 197 RRLA------IGGRLIAGLGEGAPSSATVIMNADKGPDSVIIMLPPANGARVF------D 244

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGK 270
            +  +  + P+ + +      D   + V L            G   S+ +  P +S +G 
Sbjct: 245 GLSLD--WHPDGKSILSTGMVDNRFVPVGLSTDGTASEITFSGIPDSVNVRDPAYSPDGN 302

Query: 271 RALIS 275
             + S
Sbjct: 303 HLIAS 307


>gi|319424983|gb|ADV53057.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           putrefaciens 200]
          Length = 826

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 78/226 (34%), Gaps = 13/226 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++  +A    ++          T   R  + + ++     A ++  +G +  + ++  + 
Sbjct: 337 DEDVLAKVKTENAKAKGETYQSTLAPRKIQLMQDWGWTQSAIQWHESGAKVALMLEATDN 396

Query: 282 MDIYSVDLQSNATERLTNTLFINISAS--------YSPDSSQIVFESDREGKEQLYVMQS 333
            D +   +  +  + +T     + +          + P +  + + S+  G  QLY+   
Sbjct: 397 KDRWIASVDLSKGKFITEHRLHDDAWVNYDYNQFGWVPGTDTLYYLSEETGYSQLYIKSL 456

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSN 391
            G   + ++Q K     D   SP    I +         + +  +     +   L +   
Sbjct: 457 -GEKPRALTQGKFV-VSDITLSPDASFIYYKANQNHPGIYNVHRVNISTGKNEQLTQWDG 514

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               + SP G  L+ +  +      +LY   + G  + L +  + A
Sbjct: 515 NLDYSLSPDGTKLLLNASRRTQPN-ELYIQSIGGELKQLTSYTSDA 559



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 65/173 (37%), Gaps = 13/173 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSR-------DQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
               +   D +  +++T  R       +    +  + P    + Y + +        L  
Sbjct: 397 KDRWIASVDLSKGKFITEHRLHDDAWVNYDYNQFGWVPGTDTLYYLSEETG---YSQLYI 453

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
             +   P+ +   + ++     S +         ++     +++ V++ +   E+LT   
Sbjct: 454 KSLGEKPRALTQGKFVVSDITLSPDASFIYYKANQNHPGIYNVHRVNISTGKNEQLTQWD 513

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             N+  S SPD ++++  + R  +     +QS G + K+++     ++ +  W
Sbjct: 514 G-NLDYSLSPDGTKLLLNASRRTQPNELYIQSIGGELKQLTSYTSDAFKNYPW 565


>gi|307154662|ref|YP_003890046.1| XRE family transcriptional regulator [Cyanothece sp. PCC 7822]
 gi|306984890|gb|ADN16771.1| transcriptional regulator, XRE family [Cyanothece sp. PCC 7822]
          Length = 1221

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 50/341 (14%), Positives = 107/341 (31%), Gaps = 60/341 (17%)

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI--YQSITGEKGDFNSRIL 178
             +R ++   L++    + I  K+       W      + D+I           +   R +
Sbjct: 712  DNRYKIHSVLFNSSGNRLIFAKE-NGYLYQWDWQEQELPDEIGLNGYNFPNNTEKFLRTI 770

Query: 179  FVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
             +S       +G    S+ +                  +    FS N Q +   + D   
Sbjct: 771  ALSPDGQLLATGGYDGSIQLWYLATGQFLQSFEGHTNWVRSIIFSNNSQYLISCSEDR-- 828

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILA--------------------------------- 262
               + + + +       +   R  + A                                 
Sbjct: 829  --TIRIWNLKTGDCLNTLLGHRGRVWAIVLNKQDNLLISVSDDQKIKLWEFPLGKCLNVV 886

Query: 263  ---------PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                       FS + K    S   D  + ++++D +    + L+       S ++SPD 
Sbjct: 887  QGYTHKIRSVAFSPDDKFLA-SGSDDGIVRLWNIDTK-KCEKTLSGHEGRVWSVAFSPDG 944

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFA 372
             ++V  SD      + +        + +   K  ++     +SP+GD IA +      + 
Sbjct: 945  KKLVSGSD---DRTIRIWNLETDKPELLPLKKYPNWVRSVAFSPKGDYIASSGDDKFIYL 1001

Query: 373  IGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDG 412
                +K+G +E+   E ++   +  +SP G++L FS   D 
Sbjct: 1002 YYYSEKEGWKEKFKFEHNDWIHSICFSPDGKTL-FSGSDDN 1041



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 70/203 (34%), Gaps = 10/203 (4%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ + +A  + D      V L +    +  K +      + +  FS +GK+ + S  
Sbjct: 897  AFSPDDKFLASGSDDG----IVRLWNIDTKKCEKTLSGHEGRVWSVAFSPDGKKLV-SGS 951

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D  + I++++        L        S ++SP    I   S  +    LY        
Sbjct: 952  DDRTIRIWNLETDKPELLPLKKYPNWVRSVAFSPKGDYIA-SSGDDKFIYLYYYSEKEGW 1010

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +++   +         +SP G  + F+           +++           S+++    
Sbjct: 1011 KEKFKFEHNDWIHSICFSPDGKTL-FSGSDDNLVKKWDIERGEFLLEFSGHTSHVRGIAV 1069

Query: 398  SPSGRSLIFSRKKDGDTGSKLYS 420
            S  G++L        D   KL+ 
Sbjct: 1070 SRDGKTLA---SGSNDRTIKLWD 1089



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 67/224 (29%), Gaps = 15/224 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG     + + + D           +  ++   FSP+ +K+   + D      + + +  
Sbjct: 907  SGSDDGIVRLWNIDTKKCEKTLSGHEGRVWSVAFSPDGKKLVSGSDDR----TIRIWNLE 962

Query: 246  IDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFI 303
             D+     +  + + + +  FS  G     S   D+ + +Y    +    E+        
Sbjct: 963  TDKPELLPLKKYPNWVRSVAFSPKGDYIA-SSGDDKFIYLYYYSEKEGWKEKFKFEHNDW 1021

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              S  +SPD   +   SD      +        +         +       S  G  +A 
Sbjct: 1022 IHSICFSPDGKTLFSGSD---DNLVKKWDIERGEFLLEFSGHTSHVRGIAVSRDGKTLAS 1078

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
                     I +   +  + +  +E          + P+G  + 
Sbjct: 1079 GSNDRT---IKLWDSETKKCKHTLEKQRDWIKTVDFHPNGEIIA 1119



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 115/318 (36%), Gaps = 40/318 (12%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           LW+++  ++I  K + +     R   H++       +    G   +R++F  E+      
Sbjct: 697 LWNIETEQRI--KTYTT---DNRYKIHSV-------LFNSSG---NRLIFAKENGYLYQW 741

Query: 190 KNSLCVM-DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                 + D  G N      + ++ L     SP+ Q +A   YD      + L      +
Sbjct: 742 DWQEQELPDEIGLNGYNFPNNTEKFLRTIALSPDGQLLATGGYDG----SIQLWYLATGQ 797

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISA 307
             +      + + +  FS N  + LIS  +D  + I+  +L++      L        + 
Sbjct: 798 FLQSFEGHTNWVRSIIFS-NNSQYLISCSEDRTIRIW--NLKTGDCLNTLLGHRGRVWAI 854

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +   + ++  SD    +++ + +        + Q          +SP    +A     
Sbjct: 855 VLNKQDNLLISVSD---DQKIKLWEFPLGKCLNVVQGYTHKIRSVAFSPDDKFLASGSDD 911

Query: 368 GEKFAIGVMKKDGSQ-ERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G    + +   D  + E+ L   +  + +  +SP G+ L+       D   ++++++ + 
Sbjct: 912 G---IVRLWNIDTKKCEKTLSGHEGRVWSVAFSPDGKKLVSGSD---DRTIRIWNLETD- 964

Query: 426 RNETLINTPAYASDPQWV 443
               L+    Y   P WV
Sbjct: 965 -KPELLPLKKY---PNWV 978



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 8/121 (6%)

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
            +  +G   SR     +++ SG    ++ + D +    ++    +   +    F PN + +
Sbjct: 1062 SHVRGIAVSRD---GKTLASGSNDRTIKLWDSETKKCKHTLEKQRDWIKTVDFHPNGEII 1118

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            A   YD      + L + +     K +      + +  FS NGK    S  +D  + ++ 
Sbjct: 1119 ASGDYDQ----MIRLWNVKTGELIKTLLGHIEAVSSVAFSHNGKLLA-SGSEDGTIKLWD 1173

Query: 287  V 287
            V
Sbjct: 1174 V 1174


>gi|116626377|ref|YP_828533.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229539|gb|ABJ88248.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 750

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 98/293 (33%), Gaps = 55/293 (18%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRFSPNQQKVAYATYDD------ 233
           S++  +   + +L  +D +  N R       D+    P  SP+ + +A+   D       
Sbjct: 63  SKAEPAYRYRTNLWRIDLNNPNARPEQLTFGDRADSSPAISPDNRTLAFVRTDTPTGVAA 122

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               +V+L+        + I    +   AP +  +GK  L++ Q      I    L+   
Sbjct: 123 RPHPQVWLLPLHGPGEAQVITKLENGAAAPVWRPDGKALLVTAQ------IPISKLEGK- 175

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                     ++    SP  S+  F+ DR        + +     +R  +    ++    
Sbjct: 176 -------PHFDLE---SP--SRDWFDYDRPAPGSKNEIDARPDGDRRALR----NWLARN 219

Query: 354 WSPQG----DLIAFTKFSGEKF-----AIGVMKK--DGSQERLLVEDSNLQAPTWSPSGR 402
            S       D I F              +  +    D     +  +  N  A  +SP GR
Sbjct: 220 ASKDNPTVIDRINFLGEQDLVHEMEIAELYTIDLERDNKATAITRDFYNHSAAQYSPDGR 279

Query: 403 SLIFSRK------KDGDTGSKLYSIDLNGRNETLI--------NTPAYASDPQ 441
           +++F+         D    S ++++  +G N  ++        + P + SD  
Sbjct: 280 TIVFTSTPAVADHPDRLRRSAVWTMTADGANPHVLLERKDYSFSNPRFTSDGA 332



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/308 (16%), Positives = 107/308 (34%), Gaps = 57/308 (18%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------------- 227
           + + V+      + ++   G     +    +     P + P+ + +              
Sbjct: 116 TPTGVAARPHPQVWLLPLHGPGEAQVITKLENGAAAPVWRPDGKALLVTAQIPISKLEGK 175

Query: 228 -----------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG----KRA 272
                      +  YD         +D R D   + + N+ +       S +      R 
Sbjct: 176 PHFDLESPSRDWFDYDRPAPGSKNEIDARPDGDRRALRNWLARNA----SKDNPTVIDRI 231

Query: 273 LISVQKD-----EAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFES------ 320
               ++D     E  ++Y++DL+  N    +T   + + +A YSPD   IVF S      
Sbjct: 232 NFLGEQDLVHEMEIAELYTIDLERDNKATAITRDFYNHSAAQYSPDGRTIVFTSTPAVAD 291

Query: 321 --DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----GEKFAI 373
             DR  +  ++ M ++G++   + + K+ S+ +P ++  G  +             +  +
Sbjct: 292 HPDRLRRSAVWTMTADGANPHVLLERKDYSFSNPRFTSDGAALVIAGSQTDEPTYRQAHL 351

Query: 374 GVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-L 430
                   +   L +  DS+ +A   S  G  ++F+    G  G  L  +   G + T L
Sbjct: 352 ARFDFKDQKLTWLTDKWDSSARAGKVSADGG-VLFATPWQG--GEPLLRVSAKGGDVTKL 408

Query: 431 INTPAYAS 438
           +  P    
Sbjct: 409 VEGPTGVG 416



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 72/218 (33%), Gaps = 17/218 (7%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--------QKDEAMDIYSV 287
           I  +Y +D   D     I        A ++S +G+  + +          +     ++++
Sbjct: 245 IAELYTIDLERDNKATAITRDFYNHSAAQYSPDGRTIVFTSTPAVADHPDRLRRSAVWTM 304

Query: 288 DLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRI 341
                    L      + S   ++ D + +V    +  +       L            +
Sbjct: 305 TADGANPHVLLERKDYSFSNPRFTSDGAALVIAGSQTDEPTYRQAHLARFDFKDQKLTWL 364

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           +   ++S      S  G ++  T + G +  + V    G     LVE        +   G
Sbjct: 365 TDKWDSSARAGKVSADGGVLFATPWQGGEPLLRV-SAKGGDVTKLVEGPTGVG-AFDEGG 422

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
             ++++     D   +L+  + NG++  L +  A+  +
Sbjct: 423 GRIVYALISVPDPN-ELWVREKNGKSRQLTDLNAWVKE 459



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 71/219 (32%), Gaps = 13/219 (5%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            ++++  M  DGAN   L   +D     PRF+ +   +  A    ++         R D 
Sbjct: 297 RRSAVWTMTADGANPHVLLERKDYSFSNPRFTSDGAALVIAGSQTDEPTYRQAHLARFDF 356

Query: 249 APKRIGN----FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             +++      + S   A + S++G   L +        +  V  +     +L       
Sbjct: 357 KDQKLTWLTDKWDSSARAGKVSADGG-VLFATPWQGGEPLLRVSAKGGDVTKLVEGPT-- 413

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              ++     +IV+            ++      ++++          +  P+   +  T
Sbjct: 414 GVGAFDEGGGRIVYALISVPDPNELWVREKNGKSRQLTDLNAWVKEKDLVIPEEHWL--T 471

Query: 365 KFSGEKFAIGVMKKD----GSQERLLVEDSNLQAPTWSP 399
           +  G K    VM       G +   +VE     +  W P
Sbjct: 472 RPDGLKVQYWVMNPTHAEAGKRYPWVVEMHGGPSAMWGP 510



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 7/87 (8%)

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-----GDTGSKLY 419
           ++    + I +   +   E+L   D    +P  SP  R+L F R             +++
Sbjct: 70  RYRTNLWRIDLNNPNARPEQLTFGDRADSSPAISPDNRTLAFVRTDTPTGVAARPHPQVW 129

Query: 420 SIDLNGRNETLINT--PAYASDPQWVG 444
            + L+G  E  + T     A+ P W  
Sbjct: 130 LLPLHGPGEAQVITKLENGAAAPVWRP 156


>gi|281423173|ref|ZP_06254086.1| prolyl oligopeptidase family protein [Prevotella oris F0302]
 gi|281402509|gb|EFB33340.1| prolyl oligopeptidase family protein [Prevotella oris F0302]
          Length = 722

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 82/258 (31%), Gaps = 63/258 (24%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATE 295
           M  + D     +      I     S +GK  +  V             ++  D       
Sbjct: 31  MKLQSDLMTPEVLWGMGRIGGASPSPDGKSIVYQVSYYSVEENKSHTMLFVQDANRKNKR 90

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +LT        A +     +I F   R+G  +++VM ++G +++++S   + S     +S
Sbjct: 91  QLTMDNKNESDAVWIGGGQRIAFL--RDG--EIWVMTADGKNRQQLSH-TQGSIEGFAFS 145

Query: 356 PQGDLIAFTK-------------------------FSGEKFAIGV----------MKKDG 380
           P    + + K                          +   +   V          +  +G
Sbjct: 146 PDEKKVVYIKSIPYHGTIRQNPSDLPKATGLRITDMNYRHWDHYVETIAHPFVADVTANG 205

Query: 381 -SQERLLVEDSNLQAP----------TWSPSGRSLIFSRKKDGD------TGSKLYSIDL 423
            ++ + ++E    ++P           WS   +S+ ++ +K         T + +Y   L
Sbjct: 206 INEGKDIMEGEPYESPVAPFGGIGQIAWSTDSKSIAYTSRKKEGTQYAISTDTDIYLYSL 265

Query: 424 NGRNETLINTPAYASDPQ 441
                T +  P    +P+
Sbjct: 266 TTGKTTNLCKPEGYQEPK 283



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 56/384 (14%), Positives = 105/384 (27%), Gaps = 97/384 (25%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            G        +    +V +  + V++ K            + RK    ++ D        
Sbjct: 49  IGGASPSPDGKSIVYQVSY--YSVEENK---SHTMLFVQDANRKNKRQLTMDNKNESDAV 103

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
                 RI F+            + VM  DG N + L+ ++  I     FSP+++KV Y 
Sbjct: 104 WIGGGQRIAFL--------RDGEIWVMTADGKNRQQLSHTQGSIEGF-AFSPDEKKVVYI 154

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFR----------------------SMI------- 260
                                 RI +                         +        
Sbjct: 155 KSIPYHGTIRQNPSDLPKATGLRITDMNYRHWDHYVETIAHPFVADVTANGINEGKDIME 214

Query: 261 -------LAP-------RFSSNGKRALISVQKDEAM--------DIYSVDLQSNATERLT 298
                  +AP        +S++ K    + +K E          DIY   L +  T  L 
Sbjct: 215 GEPYESPVAPFGGIGQIAWSTDSKSIAYTSRKKEGTQYAISTDTDIYLYSLTTGKTTNLC 274

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                                 D     +   +     D +           +P +SP G
Sbjct: 275 KPEGYQ-EPKI-----------DTTKTMKGQQVNHQNGDMQV------GYDVNPKFSPDG 316

Query: 359 DLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRK 409
             I++     + +      + +M+    ++  L+     DSN+    W+   +S+ F   
Sbjct: 317 KYISWQSMEHDGYESDLNRLCIMEISTGKKHYLIHKDNFDSNVDEYVWANDSKSVYFLGC 376

Query: 410 KDGDTGSKLYSIDLNGRNETLINT 433
                   +Y   L G+   L + 
Sbjct: 377 --WHACINVYQATLEGKVMQLTDG 398


>gi|254389642|ref|ZP_05004868.1| WD-40 repeat-containing protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197703355|gb|EDY49167.1| WD-40 repeat-containing protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 960

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 78/230 (33%), Gaps = 30/230 (13%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P R +      +SP+   +A          RV L D    +        R  + A  +S 
Sbjct: 298 PKRSEAASVLSYSPDGTTLA-----GNIGPRVLLRDALSGKLRATFTGHRKDVTALAYSP 352

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G         D    I   D++S +   L        + +++PD + +   S ++G  +
Sbjct: 353 DGHVLA---TGDTQGVIRLWDIRSGSARTLAGHSNAIHTVTFAPDGTTLA-SSAKDGTVR 408

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQGDLIAFTKFSGEKF 371
           L+   +     + +++  +                       +SP G+ +A         
Sbjct: 409 LW--NTTTGSHRMLTRKAQGIDQTAEPEYDGHRLPLHTSLIGFSPDGETLA-VSQRDGTV 465

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +  +     +  L+     ++   +SP G++L      D DT  +L+ +
Sbjct: 466 GLWAIATRTLRRVLVGHRGQVRRVHFSPDGKTLA--TTDDQDTTIRLWDL 513



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 81/234 (34%), Gaps = 32/234 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A +  D      V L         + +   R  +    FS +GK    +  +
Sbjct: 449 FSPDGETLAVSQRDG----TVGLWAIATRTLRRVLVGHRGQVRRVHFSPDGKTLATTDDQ 504

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + ++ +  +      LT    +  + ++S DSS +V   DR G   +    S+   +
Sbjct: 505 DTTIRLWDL-AKGAVHTTLTAYFDLISALAFSKDSSVLV-TVDRLG---IRQWASSHPVR 559

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE----------KFAIGVMKKDGSQERLLVE 388
           + +            ++  G  +A    +            K  + +      + RL + 
Sbjct: 560 RTLRSGHATGIVSMDFAQDGRTLATAFGTEGPRDPFLRLLSKHTLHIWNLPSHRRRLTIN 619

Query: 389 DSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNETLINTPAYASD 439
           D  + AP   SP G ++  S            S+DL       T +  PA   D
Sbjct: 620 D--VMAPFDLSPDGMAIATSSSDG--------SVDLRETRTGRTRLTIPAEVRD 663



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 76/241 (31%), Gaps = 27/241 (11%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           PS    +    FSP+   +A A  D     R  L++T   +  + I      + +  FS 
Sbjct: 665 PSDQPFVQALAFSPDGTILAIAGSD-----RTMLLNTHTGKPLRTINTRNVAVSSLAFSP 719

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +G   ++     +  ++   D+ +      L      +     S D           G  
Sbjct: 720 DGASLVV--MNSDGAEVQLRDVATGKLRGTLGTGQHDSDRLPLSSDGLLAA----GAGSG 773

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +  +    + R     + +     +SP G  +A    +G +  +     +    R  
Sbjct: 774 SVRLWNTTTFKEHRTITSLDGTVSSVAFSPDGRTLATAGTTGSRIRLW--DTETGTLRQT 831

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKD------GDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + DS+ +  +       L FS           D   + ++ DL  +   +        DP
Sbjct: 832 LSDSSKRFLS-------LAFSSDTPTLAVGISDGTVQFWNTDLPDKRTAVTRLCQAIYDP 884

Query: 441 Q 441
            
Sbjct: 885 S 885



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 57/148 (38%), Gaps = 9/148 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYD----DEDILRVYLMDTRI 246
           SL VM+ DGA ++    +  ++         +  ++  ++            V L +T  
Sbjct: 723 SLVVMNSDGAEVQLRDVATGKLRGTLGTGQHDSDRLPLSSDGLLAAGAGSGSVRLWNTTT 782

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINI 305
            +  + I +    + +  FS +G+    +      + ++  D ++    + L+++    +
Sbjct: 783 FKEHRTITSLDGTVSSVAFSPDGRTLATAGTTGSRIRLW--DTETGTLRQTLSDSSKRFL 840

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQS 333
           S ++S D+  +      +G  Q +    
Sbjct: 841 SLAFSSDTPTLA-VGISDGTVQFWNTDL 867


>gi|218778385|ref|YP_002429703.1| Ig domain protein group 2 domain protein [Desulfatibacillum
            alkenivorans AK-01]
 gi|218759769|gb|ACL02235.1| Ig domain protein group 2 domain protein [Desulfatibacillum
            alkenivorans AK-01]
          Length = 2243

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 81/223 (36%), Gaps = 32/223 (14%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+   + + +        +   D +         +F S    P F+S+G R + +  +D
Sbjct: 1586 SPDGAYLYFMS------GNLQAWDRQTQALTTVENSFPSR-FTPDFTSDGARIIYARDRD 1638

Query: 280  E--AMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                 +I S  L  +  + L T       S   SPD ++I +         L +  S+ +
Sbjct: 1639 GLVGQEIISNSLAGDDPQVLATVLDGDVTSLELSPDGAKIAYA--------LNISFSDPT 1690

Query: 337  DQKRISQDKEA-----SYFDPVWSPQGDLI---AFTKFSGEKFAIGVMKKDGSQERLLVE 388
              +  +   +          P WSP G +I   A +  +  ++AI  +  D +    + +
Sbjct: 1691 QVRVFTLATQQEEVYVGGAAPRWSPDGSVIYAFAKSSDTNNQWAIVSLTPDMAFVEKICD 1750

Query: 389  DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              +  +P  SPSG  L +           L    L   N+ L+
Sbjct: 1751 VDSYASPALSPSGNFLAYFTDNG------LALASLTTGNQELV 1787



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 60/186 (32%), Gaps = 12/186 (6%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAP 263
                +     F P F+ +  ++ YA   D  + +  + ++     P+ +       + + 
Sbjct: 1610 TTVENSFPSRFTPDFTSDGARIIYARDRDGLVGQEIISNSLAGDDPQVLATVLDGDVTSL 1669

Query: 264  RFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFES 320
              S +G +   ++     +   +    L +   E             +SPD S I  F  
Sbjct: 1670 ELSPDGAKIAYALNISFSDPTQVRVFTLATQQEEVYVGGAA----PRWSPDGSVIYAFAK 1725

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              +   Q  ++                SY  P  SP G+ +A+   +G    + +     
Sbjct: 1726 SSDTNNQWAIVSLTPDMAFVEKICDVDSYASPALSPSGNFLAYFTDNG----LALASLTT 1781

Query: 381  SQERLL 386
              + L+
Sbjct: 1782 GNQELV 1787



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 76/243 (31%), Gaps = 28/243 (11%)

Query: 164  QSITGEKGDFNSRIL---------FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            Q++T  +  F SR            +      G++   +      G + + L    D  +
Sbjct: 1607 QALTTVENSFPSRFTPDFTSDGARIIYARDRDGLVGQEIISNSLAGDDPQVLATVLDGDV 1666

Query: 215  FEPRFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA- 272
                 SP+  K+AYA      D  +V +      +    +G       APR+S +G    
Sbjct: 1667 TSLELSPDGAKIAYALNISFSDPTQVRVFTLATQQEEVYVGG-----AAPRWSPDGSVIY 1721

Query: 273  LISVQKDEAMD--IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
              +   D      I S+       E++ +      S + SP  + + + +D      L +
Sbjct: 1722 AFAKSSDTNNQWAIVSLTPDMAFVEKICDVDSY-ASPALSPSGNFLAYFTD----NGLAL 1776

Query: 331  MQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKF---SGEKFAIGVMKKDGSQERL 385
                  +Q+ +    + S       W+     I    +   S       V+        +
Sbjct: 1777 ASLTTGNQELVMACSQPSMGTMRLFWTANESRIVMPAWGVESSNHVGAYVLNPGARSVSV 1836

Query: 386  LVE 388
            +  
Sbjct: 1837 ITS 1839



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 45/109 (41%), Gaps = 13/109 (11%)

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            +Y +   G    ++     +   D V SP G  + F   +       +   D   + L  
Sbjct: 1562 VYEISLPGGASAQL---DASFAQDVVSSPDGAYLYFMSGN-------LQAWDRQTQALTT 1611

Query: 388  EDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             +++  +   P ++  G  +I++R +DG  G ++ S  L G +  ++ T
Sbjct: 1612 VENSFPSRFTPDFTSDGARIIYARDRDGLVGQEIISNSLAGDDPQVLAT 1660


>gi|77360885|ref|YP_340460.1| peptidase [Pseudoalteromonas haloplanktis TAC125]
 gi|76875796|emb|CAI87017.1| putative peptidase [Pseudoalteromonas haloplanktis TAC125]
          Length = 646

 Score = 70.0 bits (170), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 76/219 (34%), Gaps = 54/219 (24%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           + I+   FS +G + L+S  +     +Y V++Q+    RLT+         Y P+  +++
Sbjct: 56  TSIMGSSFSPHGDKILVSSDESGIYSLYEVNVQTGGKTRLTDFTDSTYPIRYFPNDERVL 115

Query: 318 FESDREGKEQ--LYVMQSNG-------SDQKRISQDKEA--------------------- 347
           F  D  G E+  +YV +++G        D+ R S                          
Sbjct: 116 FTKDTGGNERFHIYVRETDGTVKDLTPGDETRASFAGFTKNASQFFITSNQRDAKFMDLY 175

Query: 348 -----------------SYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKK--DGSQERLLV 387
                                   SP G  IA +   S +     ++       + +L+ 
Sbjct: 176 RVNSKTYKVTPVYQNTLGLNVGAISPNGRFIALSKSNSNKDSDTFILDTYTKTLKPQLIS 235

Query: 388 --EDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   +P T+S   + L +S    G+  S+++  DL
Sbjct: 236 KHHTPAQYSPETFSADNKYLYYSTDAKGEF-SQMWRYDL 273



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 42/105 (40%), Gaps = 3/105 (2%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS 400
           +     S     +SP GD I  +      +++  +      +  L + ++   P  + P+
Sbjct: 51  TFFDTTSIMGSSFSPHGDKILVSSDESGIYSLYEVNVQTGGKTRLTDFTDSTYPIRYFPN 110

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
              ++F++   G+    +Y  + +G  + L  TP   +   + GF
Sbjct: 111 DERVLFTKDTGGNERFHIYVRETDGTVKDL--TPGDETRASFAGF 153



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 70/224 (31%), Gaps = 6/224 (2%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   +   F   S         L  ++     +  +  +   +      SPN + +A + 
Sbjct: 152 GFTKNASQFFITSNQRDAKFMDLYRVNSKTYKVTPVYQNTLGLNVG-AISPNGRFIALSK 210

Query: 231 YDDEDILRVYLMDTRI-DRAPKRIG-NFRSMILAP-RFSSNGKRALISVQ-KDEAMDIYS 286
            +       +++DT      P+ I  +      +P  FS++ K    S   K E   ++ 
Sbjct: 211 SNSNKDSDTFILDTYTKTLKPQLISKHHTPAQYSPETFSADNKYLYYSTDAKGEFSQMWR 270

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            DL S          +      +S      V   + +   ++ V+ +  + +    +   
Sbjct: 271 YDLASGEHSPALADDWDVSFIYFSTSGRYQVSGVNADASTKVTVIDTQTNKEIATPKLPA 330

Query: 347 ASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVED 389
            +     +S     +AF   S      + V +   +  + L   
Sbjct: 331 GNLRGVSFSADEQSMAFYLNSDTAPSNLFVWQVGSNNTQQLTNT 374


>gi|170117224|ref|XP_001889800.1| mycorrhiza-induced WD40-repeat domain protein [Laccaria bicolor
           S238N-H82]
 gi|164635266|gb|EDQ99576.1| mycorrhiza-induced WD40-repeat domain protein [Laccaria bicolor
           S238N-H82]
          Length = 1083

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 102/287 (35%), Gaps = 21/287 (7%)

Query: 163 YQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            +++     D+ + + F+     VVSG   N++ + +     +          +    FS
Sbjct: 653 VKALLKGHTDWVNSVTFLQNGSRVVSGSNDNTVRIWNVITGEVEAELKGHTDWVKSVTFS 712

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            +  +V   + D+     V + +         +      + +  FS +G R ++S   D+
Sbjct: 713 QDGSRVVSGSNDN----TVRIWNVITGEVEAELKGHTHWVNSVTFSQDGSR-VVSGSSDK 767

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I++V        +L        S ++S D S++V  S     + + +        + 
Sbjct: 768 TVRIWNV-TTGKVEAKLKGHTHWVKSVTFSQDGSRVVSGSH---DKTVRIWNVTTGKVED 823

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
             +          +S  G+ +  +  S +   I  +     + +L      + +  +S  
Sbjct: 824 TLKGHTHWVNSVAFSQDGNRVV-SGSSDKTVRIWNVTTGKVEAKLKGHTHWVNSVAFSQD 882

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQ 441
           G  ++       D   +++++      +TL      +N+ A++ D  
Sbjct: 883 GSRVVSGSY---DKTVRIWNVTTGKVEDTLKGHTHWVNSVAFSQDGS 926



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 89/259 (34%), Gaps = 14/259 (5%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             VVSG    ++ + +     +          +    FS +  +V   ++D      V + 
Sbjct: 759  RVVSGSSDKTVRIWNVTTGKVEAKLKGHTHWVKSVTFSQDGSRVVSGSHDK----TVRIW 814

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            +    +    +      + +  FS +G R ++S   D+ + I++V        +L     
Sbjct: 815  NVTTGKVEDTLKGHTHWVNSVAFSQDGNR-VVSGSSDKTVRIWNV-TTGKVEAKLKGHTH 872

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S ++S D S++V  S     + + +        +   +          +S  G  + 
Sbjct: 873  WVNSVAFSQDGSRVVSGSY---DKTVRIWNVTTGKVEDTLKGHTHWVNSVAFSQDGSRVV 929

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +  S +   I  +     +  L      + + ++S     ++       D   +++++ 
Sbjct: 930  -SGSSDKTVRIWNVTTGKVEAELKGHTGWVNSVSFSQDCSQVV---SGSSDKTIRVWNLT 985

Query: 423  LNGRNETLINTPAYASDPQ 441
              G +++++ +     D  
Sbjct: 986  A-GNSQSILTSDTTLPDGS 1003



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/257 (12%), Positives = 85/257 (33%), Gaps = 13/257 (5%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            VVSG   N++ + +     +          +    FS +  +V   + D      V + 
Sbjct: 717 RVVSGSNDNTVRIWNVITGEVEAELKGHTHWVNSVTFSQDGSRVVSGSSDK----TVRIW 772

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +    +   ++      + +  FS +G R ++S   D+ + I++V       + L     
Sbjct: 773 NVTTGKVEAKLKGHTHWVKSVTFSQDGSR-VVSGSHDKTVRIWNV-TTGKVEDTLKGHTH 830

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++S D +++V  S     + + +        +   +          +S  G  + 
Sbjct: 831 WVNSVAFSQDGNRVVSGSS---DKTVRIWNVTTGKVEAKLKGHTHWVNSVAFSQDGSRVV 887

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              +  +   I  +     ++ L      + +  +S  G  ++       D   +++++ 
Sbjct: 888 SGSYD-KTVRIWNVTTGKVEDTLKGHTHWVNSVAFSQDGSRVV---SGSSDKTVRIWNVT 943

Query: 423 LNGRNETLINTPAYASD 439
                  L     + + 
Sbjct: 944 TGKVEAELKGHTGWVNS 960



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 73/223 (32%), Gaps = 19/223 (8%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             VVSG    ++ + +     +          +    FS +  +V   + D      V + 
Sbjct: 801  RVVSGSHDKTVRIWNVTTGKVEDTLKGHTHWVNSVAFSQDGNRVVSGSSDK----TVRIW 856

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            +    +   ++      + +  FS +G R ++S   D+ + I++V       + L     
Sbjct: 857  NVTTGKVEAKLKGHTHWVNSVAFSQDGSR-VVSGSYDKTVRIWNV-TTGKVEDTLKGHTH 914

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S ++S D S++V  S     + + +        +   +          +S     + 
Sbjct: 915  WVNSVAFSQDGSRVVSGSS---DKTVRIWNVTTGKVEAELKGHTGWVNSVSFSQDCSQVV 971

Query: 363  FTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSL 404
                      I V     G+ + +L  D+ L      P G  +
Sbjct: 972  SGSSDKT---IRVWNLTAGNSQSILTSDTTL------PDGSRV 1005



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 16/220 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              VVSG    ++ + +     +          +    FS +  +V   +YD      V +
Sbjct: 842  NRVVSGSSDKTVRIWNVTTGKVEAKLKGHTHWVNSVAFSQDGSRVVSGSYDK----TVRI 897

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +    +    +      + +  FS +G R ++S   D+ + I++V         L    
Sbjct: 898  WNVTTGKVEDTLKGHTHWVNSVAFSQDGSR-VVSGSSDKTVRIWNV-TTGKVEAELKGHT 955

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQ 357
                S S+S D SQ+V  S     + + V      + + I    +   + S  +   S  
Sbjct: 956  GWVNSVSFSQDCSQVVSGSS---DKTIRVWNLTAGNSQSILTSDTTLPDGSRVN--ISTH 1010

Query: 358  GD-LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            G   I +             +       ++    +   P+
Sbjct: 1011 GTFRIIYPSQQPTLGMNFSTQLSDDGHWIMANHRDCCIPS 1050


>gi|212224118|ref|YP_002307354.1| acylamino acid-releasing enzyme [Thermococcus onnurineus NA1]
 gi|212009075|gb|ACJ16457.1| acylamino acid-releasing enzyme [Thermococcus onnurineus NA1]
          Length = 631

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 50/315 (15%), Positives = 102/315 (32%), Gaps = 57/315 (18%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F  + +F    +          +   DG  ++  T  +      PRFSP+ + +A+ + 
Sbjct: 20  AFGRKFVFQVTEINVENDDYFSRLYLYDGRKVKPFTSGKK--DGNPRFSPDGKLIAFTSK 77

Query: 232 DDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKD----------- 279
            D++     L     D    + +  F+  I   RF+ +GK   +    D           
Sbjct: 78  RDKESREAELYVIPTDGGEARLLTKFKYGIKDLRFTEDGKGIAVITPIDIEKKPKDDVHV 137

Query: 280 ----------------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--D 321
                               +Y VD++S    R+T    +++S     +  ++ F +  D
Sbjct: 138 IKEIPYWFNGVGWVYGRRSVVYLVDIESGRKRRIT-PKNLDVSQIRFHNG-KLYFIAQED 195

Query: 322 REGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----AIGVM 376
           RE K  +  +    G   +R++   E S  D +    G  I               I   
Sbjct: 196 REKKPMVSDLYVLEGRKARRLTP-GEWSVSDFIPLDDGTFILKANTRERGIPTNTHIYHY 254

Query: 377 KKDGSQERLLVE----------DSNLQAPTWS----PSGRSLIFSRKKDGDTGSKLYSID 422
             +  + R L            + +++ P  +      G  + +         + L+ ++
Sbjct: 255 NPERGELRKLTAKLDRAAYNSLNCDVRGPQRAELGFKDG-WVYYVATDGPR--ANLFRVN 311

Query: 423 LNGRNETLINTPAYA 437
           L G+ E +I      
Sbjct: 312 LKGKIEKVIGGDRSV 326



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 76/215 (35%), Gaps = 54/215 (25%)

Query: 269 GKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           G++ +  V        D    +Y  D      +  T+    + +  +SPD   I F S R
Sbjct: 22  GRKFVFQVTEINVENDDYFSRLYLYD--GRKVKPFTSGKK-DGNPRFSPDGKLIAFTSKR 78

Query: 323 EGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------------- 365
           + + +   LYV+ ++G + + +++ K     D  ++  G  IA                 
Sbjct: 79  DKESREAELYVIPTDGGEARLLTKFKYG-IKDLRFTEDGKGIAVITPIDIEKKPKDDVHV 137

Query: 366 -------------FSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                          G +  + ++    G + R+  ++ ++    +  +G+ L F  ++D
Sbjct: 138 IKEIPYWFNGVGWVYGRRSVVYLVDIESGRKRRITPKNLDVSQIRFH-NGK-LYFIAQED 195

Query: 412 ---GDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
                  S LY   L GR    + TP       W 
Sbjct: 196 REKKPMVSDLYV--LEGRKARRL-TPGE-----WS 222


>gi|317494677|ref|ZP_07953089.1| hypothetical protein HMPREF0864_03859 [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917279|gb|EFV38626.1| hypothetical protein HMPREF0864_03859 [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 427

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 60/158 (37%), Gaps = 20/158 (12%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVFES-DREGKEQLY 329
              D       S    R+T T       +  +   +   SP+  +I F   D  G  QL+
Sbjct: 276 GTADRLPAPPASVQQRRITFTHQRKYPGLATTPRHWLRSSPNGDEIAFLMHDDAGIVQLW 335

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
            +  NG + ++I+  K +      W P G+ + F   +    +I        +   L   
Sbjct: 336 TVSPNGGNPRQITHGKHSVQSALSWHPNGESLFFAMDN----SIVRCSAKSGEITRLTLR 391

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +    ++   SP G+ + + R+ DG    +L+ ++L
Sbjct: 392 SEQPPCAESVVVSPDGKKVAYMREIDG--WPQLFVVNL 427



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 11/129 (8%)

Query: 212 QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +   PR     SPN  ++A+  +DD  I++++ +        +      S+  A  +  
Sbjct: 303 GLATTPRHWLRSSPNGDEIAFLMHDDAGIVQLWTVSPNGGNPRQITHGKHSVQSALSWHP 362

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREG 324
           NG+    ++       I     +S    RLT          S   SPD  ++ +  + +G
Sbjct: 363 NGESLFFAMDNS----IVRCSAKSGEITRLTLRSEQPPCAESVVVSPDGKKVAYMREIDG 418

Query: 325 KEQLYVMQS 333
             QL+V+  
Sbjct: 419 WPQLFVVNL 427



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +  +G N R +T  +  +     + PN + + +A   D  I+R       I R   
Sbjct: 333 QLWTVSPNGGNPRQITHGKHSVQSALSWHPNGESLFFAM--DNSIVRCSAKSGEITRLTL 390

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           R         +   S +GK+     + D    ++ V+L
Sbjct: 391 R-SEQPPCAESVVVSPDGKKVAYMREIDGWPQLFVVNL 427


>gi|256842254|ref|ZP_05547758.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256736138|gb|EEU49468.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 490

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 60/159 (37%), Gaps = 29/159 (18%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDIL-------------RVYLMDTRIDRAPKR 252
           LT  +D++   P FSPN   + Y +   + +                +       R  + 
Sbjct: 279 LTSRKDELETFPTFSPNGNWIYYCSAPIQPLPDSIHNLKYSLCRISFHKDTKEWGRQIET 338

Query: 253 IGNFRSMILA---PRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLT--NT 300
           + + +    +   P+ S +GK  L +V             D++ ++LQ+   + L   N+
Sbjct: 339 VWDAQKHNGSACHPKISPDGKYLLFTVADYGTFPIWHRETDLHMMNLQTGKIDTLPAVNS 398

Query: 301 LFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNG 335
              +   S+S +S   VF S R+    GK     + S G
Sbjct: 399 DKSDTYHSWSSNSHWFVFASKRDDGLYGKPYFSYVDSTG 437



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 70/223 (31%), Gaps = 48/223 (21%)

Query: 265 FSSNGKRALISVQ----------------KDEAMDIYSVDLQSNAT--ERLTNTLF-INI 305
           F  +G+ A+ S                   D   D+   D +        LT+    +  
Sbjct: 229 FHPSGQFAVFSTNIIIPAFHSLGSKRLEVYDTTSDLVVADFRKKQLITSPLTSRKDELET 288

Query: 306 SASYSPDSSQIVFES-------DREGKEQLYVMQSN--------GSDQKRIS--QDKEAS 348
             ++SP+ + I + S       D     +  + + +        G   + +   Q    S
Sbjct: 289 FPTFSPNGNWIYYCSAPIQPLPDSIHNLKYSLCRISFHKDTKEWGRQIETVWDAQKHNGS 348

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAP---TWS 398
              P  SP G  + FT      F I        +M     +   L   ++ ++    +WS
Sbjct: 349 ACHPKISPDGKYLLFTVADYGTFPIWHRETDLHMMNLQTGKIDTLPAVNSDKSDTYHSWS 408

Query: 399 PSGRSLIFSRKKDGDTGSKLY--SIDLNGRNETLINTPAYASD 439
            +    +F+ K+D     K Y   +D  G+       P    +
Sbjct: 409 SNSHWFVFASKRDDGLYGKPYFSYVDSTGKAYKPFVLPQEDPE 451


>gi|238783070|ref|ZP_04627097.1| hypothetical protein yberc0001_4290 [Yersinia bercovieri ATCC
           43970]
 gi|238716071|gb|EEQ08056.1| hypothetical protein yberc0001_4290 [Yersinia bercovieri ATCC
           43970]
          Length = 433

 Score = 69.7 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 60/159 (37%), Gaps = 20/159 (12%)

Query: 279 DEAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQL 328
           +             +  R+T T       +  S   +   SPD S I     D     QL
Sbjct: 280 EGTPTTLPAPPAGVSQRRVTYTTERRFPGLVTSPRHWLRASPDGSAIACLMRDDNDVVQL 339

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++  NG + ++++  +        W PQG  +AF   +    ++        Q + L  
Sbjct: 340 WLVSPNGGEPRQLTSSQWGIQSAFSWHPQGGSLAFVCDN----SVMRCDSTSGQLQRLTA 395

Query: 389 DS----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            S       A  +SP G  + F R+ +G   +++++++ 
Sbjct: 396 RSAVAPLADAVVFSPDGSQIAFMREIEG--FAQIFTVNA 432



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R SP+   +A    DD D+++++L+        +   +   +  A  +   G        
Sbjct: 318 RASPDGSAIACLMRDDNDVVQLWLVSPNGGEPRQLTSSQWGIQSAFSWHPQGGSLAFVCD 377

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFI---NISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                 +   D  S   +RLT    +     +  +SPD SQI F  + EG  Q++ + + 
Sbjct: 378 NS----VMRCDSTSGQLQRLTARSAVAPLADAVVFSPDGSQIAFMREIEGFAQIFTVNAG 433



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 48/139 (34%), Gaps = 15/139 (10%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASY-----FDPVW---SPQGDLIA-FTKFSGEKFAI 373
           EG          G  Q+R++   E  +         W   SP G  IA   +   +   +
Sbjct: 280 EGTPTTLPAPPAGVSQRRVTYTTERRFPGLVTSPRHWLRASPDGSAIACLMRDDNDVVQL 339

Query: 374 GVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIF----SRKKDGDTGSKLYSIDLNGRN 427
            ++  +G + R L         A +W P G SL F    S  +   T  +L  +      
Sbjct: 340 WLVSPNGGEPRQLTSSQWGIQSAFSWHPQGGSLAFVCDNSVMRCDSTSGQLQRLTARSAV 399

Query: 428 ETLINTPAYASDPQWVGFM 446
             L +   ++ D   + FM
Sbjct: 400 APLADAVVFSPDGSQIAFM 418



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 9/101 (8%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA---TYDDEDILRVYLMDTRIDR 248
            L ++  +G   R LT S+  I     + P    +A+    +    D     L       
Sbjct: 338 QLWLVSPNGGEPRQLTSSQWGIQSAFSWHPQGGSLAFVCDNSVMRCDSTSGQLQRLTARS 397

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           A   + +      A  FS +G +     + +    I++V+ 
Sbjct: 398 AVAPLAD------AVVFSPDGSQIAFMREIEGFAQIFTVNA 432


>gi|119773693|ref|YP_926433.1| putative transcriptional regulator, CadC [Shewanella amazonensis
           SB2B]
 gi|119766193|gb|ABL98763.1| putative transcriptional regulator, CadC [Shewanella amazonensis
           SB2B]
          Length = 702

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 64/186 (34%), Gaps = 6/186 (3%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRF 265
             +   +   P  S +   +A+    +     +Y+ D    + P + + + +     P +
Sbjct: 174 VTNFQGVEEHPAISNDGNMLAFQWLQENRHSGLYIKDLSDSKNPLRLVSSGKYQEALPIW 233

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQIVFESD 321
           S +          D+      V       E+L +T    +       +SPD   +++   
Sbjct: 234 SPDDTALAYVRIDDKNQCQIRVKQLRTQQEKLIDTDCGYVEFKKMLDWSPDGRMLLYPKR 293

Query: 322 REGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             G    +          ++S  +K  S F  +W      I   +   +++ + +++  G
Sbjct: 294 INGIFAFFKYDFVTEKTTQVSFPEKNTSDFMGIWLENNQDIVVVREQAQQYKLILLQPSG 353

Query: 381 SQERLL 386
            ++ LL
Sbjct: 354 QEKSLL 359



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 82/216 (37%), Gaps = 13/216 (6%)

Query: 228 YATYDDEDILRVYLMDTRIDRAP--KRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDI 284
           Y+   +              + P    + NF+ +   P  S++G       +Q++    +
Sbjct: 147 YSLIQNRKFGPAQEQIEDTMKFPALTSVTNFQGVEEHPAISNDGNMLAFQWLQENRHSGL 206

Query: 285 YSVDL-QSNATERL-TNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRI 341
           Y  DL  S    RL ++  +      +SPD + + +    +  + Q+ V Q     +K I
Sbjct: 207 YIKDLSDSKNPLRLVSSGKYQEALPIWSPDDTALAYVRIDDKNQCQIRVKQLRTQQEKLI 266

Query: 342 SQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPT 396
             D     F     WSP G ++ + K     FA         +   +    ++++     
Sbjct: 267 DTDCGYVEFKKMLDWSPDGRMLLYPKRINGIFAFFKYDFVTEKTTQVSFPEKNTSDFMGI 326

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           W  + + ++  R++      KL  +  +G+ ++L++
Sbjct: 327 WLENNQDIVVVREQA--QQYKLILLQPSGQEKSLLD 360



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 79/239 (33%), Gaps = 11/239 (4%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  L ++   G   + L   ++ I    R   +  +V     ++  I    L    ID
Sbjct: 341 AQQYKLILLQPSGQ-EKSLLDYKESITGLTR-GKDNNQVFVNFSENGKIATYLLSFNNID 398

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
               ++ N  S      F+      L++  +     I      S    R   +   ++  
Sbjct: 399 APELKLINQLSGASGLSFNHKTNELLVAKHQSSEY-IVQRRFDSAQIVRRVFSSNRDLYG 457

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTK 365
            +  D   IVF S+R     L+        + R   +   +      SP G   A    K
Sbjct: 458 QFISDPENIVFVSNRSANWDLWRQN---EQEARNLTNGIGTVNFASVSPDGKHFATALVK 514

Query: 366 FSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +K  + +    DG   R+         PTWS  G  + FS  K+   G  +Y +D+
Sbjct: 515 EGDDKQRLYIGNVQDGHLIRVDTGSLTPTFPTWSLDGSLVYFSAIKNNHNG--IYQLDI 571



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 71/190 (37%), Gaps = 14/190 (7%)

Query: 188 IIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              + L + D  D  N   L  S       P +SP+   +AY   DD++  ++ +   R 
Sbjct: 201 NRHSGLYIKDLSDSKNPLRLVSSGKYQEALPIWSPDDTALAYVRIDDKNQCQIRVKQLRT 260

Query: 247 DRAPKRIGNFRSMIL--APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI- 303
            +      +   +       +S +G+  L   + +     +  D  +  T +++      
Sbjct: 261 QQEKLIDTDCGYVEFKKMLDWSPDGRMLLYPKRINGIFAFFKYDFVTEKTTQVSFPEKNT 320

Query: 304 -NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ---------KRISQDKEASYFDPV 353
            +    +  ++  IV   ++  + +L ++Q +G ++           +++ K+ +     
Sbjct: 321 SDFMGIWLENNQDIVVVREQAQQYKLILLQPSGQEKSLLDYKESITGLTRGKDNNQVFVN 380

Query: 354 WSPQGDLIAF 363
           +S  G +  +
Sbjct: 381 FSENGKIATY 390



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/245 (12%), Positives = 84/245 (34%), Gaps = 13/245 (5%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +   P ++   F   +  N Q +       +    + L         K + +++  I   
Sbjct: 312 QVSFPEKNTSDFMGIWLENNQDIVVVREQAQQYKLILLQP---SGQEKSLLDYKESITGL 368

Query: 264 RFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +  +  ++  ++  +  Y +   ++ +   + L N L      S++  +++++  +
Sbjct: 369 TRGKDNNQVFVNFSENGKIATYLLSFNNIDAPELK-LINQLSGASGLSFNHKTNELL-VA 426

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +  E +   + + +   R         +    S   + I F       + +    +  
Sbjct: 427 KHQSSEYIVQRRFDSAQIVRRVFSSNRDLYGQFIS-DPENIVFVSNRSANWDLWRQNEQ- 484

Query: 381 SQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS- 438
            + R L      +   + SP G+    +  K+GD   +LY  ++   +   ++T +    
Sbjct: 485 -EARNLTNGIGTVNFASVSPDGKHFATALVKEGDDKQRLYIGNVQDGHLIRVDTGSLTPT 543

Query: 439 DPQWV 443
            P W 
Sbjct: 544 FPTWS 548



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 65/178 (36%), Gaps = 12/178 (6%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I+FVS    +      L   +      R LT     + F    SP+ +  A A   + D 
Sbjct: 466 IVFVSNRSAN----WDLWRQNE--QEARNLTNGIGTVNFA-SVSPDGKHFATALVKEGDD 518

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            +   +    D    R+         P +S +G     S  K+    IY +D++++ T +
Sbjct: 519 KQRLYIGNVQDGHLIRVDTGSLTPTFPTWSLDGSLVYFSAIKNNHNGIYQLDIKTSTTTQ 578

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           LT T  I       P  +  +  S R  ++ ++    N +   +I  D   + F   +
Sbjct: 579 LTFTDEIYA----IPAGNDQLLVS-RTNEDGIWRFDINSNQFSQIVTDLSINDFGSFF 631


>gi|171059834|ref|YP_001792183.1| peptidase S9 prolyl oligopeptidase [Leptothrix cholodnii SP-6]
 gi|170777279|gb|ACB35418.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Leptothrix cholodnii SP-6]
          Length = 668

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 72/263 (27%), Gaps = 66/263 (25%)

Query: 216 EPRFSPNQQK----VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            P   P+  +    V               + + +  AP+ + +       P +S +G  
Sbjct: 20  PPSLCPDGAQAVVSVTRHDMAHNRSHSALWLLSTLGGAPRALTHCGDKDGQPAWSPHGDL 79

Query: 272 ALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----D 321
                ++D+         +Y +       +R         +  + PD  +I F +    D
Sbjct: 80  IAFIARRDQQGAKDEEPQLYLIAPDGGEAQRAAVLPTGVEAFKWFPDGKRIAFIAWVWPD 139

Query: 322 REGK-------------------------------------EQLYVMQSNGSDQKRISQD 344
             G                                        L V+       + + + 
Sbjct: 140 ARGAKAQALRMKAWRERKESGYATSEALYRWWDHNLPQDRVPHLLVLDIRSGRVRDLFEG 199

Query: 345 K-------EASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLVEDSN 391
                   E        SP G  IAF              A+  +       R LV+D+ 
Sbjct: 200 TPFELSRTELDGSCFDISPDGLNIAFMHDPAPHKRIDHCHALAEIDLRSGAVRTLVQDAG 259

Query: 392 L--QAPTWSPSGRSLIFSRKKDG 412
              +AP++SP+G  + F+    G
Sbjct: 260 WHLEAPSYSPAGDRIAFTASHRG 282



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 75/250 (30%), Gaps = 69/250 (27%)

Query: 263 PRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P    +G +A++SV + +         ++ +     A   LT+    +   ++SP    I
Sbjct: 21  PSLCPDGAQAVVSVTRHDMAHNRSHSALWLLSTLGGAPRALTHCGDKDGQPAWSPHGDLI 80

Query: 317 VFESDREGK------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
            F + R+ +       QLY++  +G + +R +           W P G  IAF  +    
Sbjct: 81  AFIARRDQQGAKDEEPQLYLIAPDGGEAQRAAVLPTG-VEAFKWFPDGKRIAFIAWVWPD 139

Query: 367 -------------------------------------SGEKFAIGVMKKDGSQERLLVED 389
                                                      + V+     + R L E 
Sbjct: 140 ARGAKAQALRMKAWRERKESGYATSEALYRWWDHNLPQDRVPHLLVLDIRSGRVRDLFEG 199

Query: 390 SNLQ---------APTWSPSGRSLIFSRKKDGDTG----SKLYSIDL-NGRNETLINTPA 435
           +  +             SP G ++ F               L  IDL +G   TL+    
Sbjct: 200 TPFELSRTELDGSCFDISPDGLNIAFMHDPAPHKRIDHCHALAEIDLRSGAVRTLVQDAG 259

Query: 436 YASD-PQWVG 444
           +  + P +  
Sbjct: 260 WHLEAPSYSP 269



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 71/235 (30%), Gaps = 31/235 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVY-----LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            SP+   +A+           +      +D R       + +    + AP +S  G R  
Sbjct: 216 ISPDGLNIAFMHDPAPHKRIDHCHALAEIDLRSGAVRTLVQDAGWHLEAPSYSPAGDRIA 275

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTL---------FINISASYSPDSSQIVFESDREG 324
            +         +++  Q    +R T T           +N+   +  D   ++F ++  G
Sbjct: 276 FTASHRGLK--HTMPRQLALWDRETATWSVESAQWDHAVNVPLHWEDDGQSLLFTAEDRG 333

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           ++ L+         +R+      S FD      G  +   +         V+     +  
Sbjct: 334 EQPLWRFDLPDRRAERVQAHGWVSSFDKRA---GTTLIQLESVSHPPQAWVLPP--GEPA 388

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
             V+  N       P GR      +    TG+       +G    LI  P +   
Sbjct: 389 RRVDRFNDSVLASHPMGR-----SETHTITGAL-----GDGVQIRLIYPPGFDPS 433


>gi|170782073|ref|YP_001710405.1| putative peptidase [Clavibacter michiganensis subsp. sepedonicus]
 gi|169156641|emb|CAQ01793.1| putative peptidase [Clavibacter michiganensis subsp. sepedonicus]
          Length = 663

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 72/234 (30%), Gaps = 39/234 (16%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATER 296
           +++ + T     P+RI        APR S +G               ++ V         
Sbjct: 9   QLWEVATDGSAPPRRITRGFR-DTAPRLSPDGTVIAFLRAAPQGPPQLHVVRAAGGEPVA 67

Query: 297 LTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           +T+ L    +  +SPD ++IVF S   +      +  +       +RI+  K        
Sbjct: 68  VTDELLGVGAFDWSPDGTRIVFASRVAEPGRYGSVEGVSPAAEPARRITTTK-YLANGLG 126

Query: 354 WS------------PQGDLIAFTKFSGEKFAIG---VMKKDGSQ--------------ER 384
           WS            P  D   F       +       ++ DG+                R
Sbjct: 127 WSTDRHTQLSLVDLPDLDAEPFVAAVPSGYPDASDPAVRGDGADAAPSAAERAGVPPVVR 186

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           L  E  +  AP +S  G  ++F   +       L    L+G     +     AS
Sbjct: 187 LTDEPVDHDAPRFSSDGSEVLFVASRHEGRDDDL----LSGAYAVAVPAVGDAS 236


>gi|158340055|ref|YP_001521225.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158310296|gb|ABW31911.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1830

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 87/228 (38%), Gaps = 17/228 (7%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++ +    N++ +  ++G+ I  L    D +L    +SP+   +A A+ D+     V L 
Sbjct: 1130 TLATASSDNTVKLWSKEGSLITTLEGHTDAVLAL-AYSPDGSTLATASSDN----TVKLW 1184

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             ++       +     ++LA  +S +G     +   D  + ++S   + +    L     
Sbjct: 1185 -SKEGSLITTLEGHTDLVLALAYSPDGSTLA-TASSDNTVKLWS--KEGSLITTLEGHTA 1240

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +YSPD S +   SD    ++   + S         +   A+  D  +SP G  +A
Sbjct: 1241 AVGDLAYSPDGSTLATASD----DKTVKLWSKEGSLITTLEGHTAAVGDLAYSPDGSTLA 1296

Query: 363  FTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRK 409
                      + +  K+GS    L      + A  +SP G +L  +  
Sbjct: 1297 TASRDNT---VKLWSKEGSLITTLEGHTDLVLALAYSPDGSTLATASY 1341



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 93/239 (38%), Gaps = 20/239 (8%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++ +    N++ +  ++G+ +         ++    +SP+   +A A+YD     +   +
Sbjct: 1294 TLATASRDNTVKLWSKEGS-LITTLEGHTDLVLALAYSPDGSTLATASYD-----KTVKL 1347

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             ++       +    + +LA  +S +G     +   D  + ++S   + +    L     
Sbjct: 1348 RSKEGSLITTLEGHTAAVLALAYSPDGSTLA-TASSDNTVKLWS--KEGSLITTLEGHTD 1404

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +  + +YSPD S +   + R+   +L+     GS    +    +A +    +SP G  +A
Sbjct: 1405 LVNTLAYSPDGSTLA-TASRDNTVKLW--SKEGSLITTLEGHTDAIW-ALAYSPDGSTLA 1460

Query: 363  FTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                      + +  K+GS    L      +    +SP G +L  +     D   KL+S
Sbjct: 1461 TASDDNT---VKLWSKEGSLITTLEGHTDAVGDLAYSPDGSTLATASS---DNTVKLWS 1513



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 75/217 (34%), Gaps = 19/217 (8%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                     +    +SP+   +A A+ D+     V L            G+   +     
Sbjct: 1356 TTLEGHTAAVLALAYSPDGSTLATASSDN----TVKLWSKEGSLITTLEGHTDLVNTL-A 1410

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +S +G     +  +D  + ++S   + +    L        + +YSPD S +   SD   
Sbjct: 1411 YSPDGSTLA-TASRDNTVKLWS--KEGSLITTLEGHTDAIWALAYSPDGSTLATASD--- 1464

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
               + +    GS    +    +A   D  +SP G  +A          + +  K+GS   
Sbjct: 1465 DNTVKLWSKEGSLITTLEGHTDA-VGDLAYSPDGSTLATASSDNT---VKLWSKEGSLIT 1520

Query: 385  LL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             L      +    +SP G +L  + +   D   KL+S
Sbjct: 1521 TLEGHTYAIWDLAYSPDGSTLATASR---DNTVKLWS 1554



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 94/239 (39%), Gaps = 20/239 (8%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++ +     ++ +  ++G+ I  L    D +L    +SP+   +A A+ D+     V L 
Sbjct: 1089 TLATASYDKTVKLWSKEGSLITTLEGHTDAVLAL-AYSPDGSTLATASSDN----TVKLW 1143

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             ++       +      +LA  +S +G     +   D  + ++S   + +    L     
Sbjct: 1144 -SKEGSLITTLEGHTDAVLALAYSPDGSTLA-TASSDNTVKLWS--KEGSLITTLEGHTD 1199

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            + ++ +YSPD S +   S       + +    GS    + +   A+  D  +SP G  +A
Sbjct: 1200 LVLALAYSPDGSTLATASS---DNTVKLWSKEGSLITTL-EGHTAAVGDLAYSPDGSTLA 1255

Query: 363  FTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                      + +  K+GS    L    + +    +SP G +L  + +   D   KL+S
Sbjct: 1256 TASDDKT---VKLWSKEGSLITTLEGHTAAVGDLAYSPDGSTLATASR---DNTVKLWS 1308



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 96/270 (35%), Gaps = 30/270 (11%)

Query: 160  DDIYQSITGEKGDFNSRILFVSESVVSGII------KNSLCVMDRDGANIRYLTPSRDQI 213
            D +Y        + ++  +        G          ++ +  ++G+ +         +
Sbjct: 1019 DSVYNIRQQNNLEGHTDAVLALAYSPDGSTLATASSDKTVKLWSKEGS-LITTLEGHTDL 1077

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +    +SP+   +A A+YD    ++++   ++       +      +LA  +S +G    
Sbjct: 1078 VLALAYSPDGSTLATASYD--KTVKLW---SKEGSLITTLEGHTDAVLALAYSPDGSTLA 1132

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             +   D  + ++S   + +    L       ++ +YSPD S +   S       + +   
Sbjct: 1133 -TASSDNTVKLWS--KEGSLITTLEGHTDAVLALAYSPDGSTLATASS---DNTVKLWSK 1186

Query: 334  NGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDS 390
             GS    I+  +  +       +SP G  +A          + +  K+GS    L    +
Sbjct: 1187 EGS---LITTLEGHTDLVLALAYSPDGSTLATASSDNT---VKLWSKEGSLITTLEGHTA 1240

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +    +SP G +L  +     D   KL+S
Sbjct: 1241 AVGDLAYSPDGSTLATASD---DKTVKLWS 1267



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 92/240 (38%), Gaps = 24/240 (10%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++ +    N++ +  ++G+ I  L    D +     +SP+   +A A+ D+     V L 
Sbjct: 1376 TLATASSDNTVKLWSKEGSLITTLEGHTDLVNTL-AYSPDGSTLATASRDN----TVKLW 1430

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             ++       +      I A  +S +G     +   D  + ++S   + +    L     
Sbjct: 1431 -SKEGSLITTLEGHTDAIWALAYSPDGSTLA-TASDDNTVKLWS--KEGSLITTLEGHTD 1486

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDL 360
                 +YSPD S +   S       + +    GS    I+  +  +Y  +D  +SP G  
Sbjct: 1487 AVGDLAYSPDGSTLATASS---DNTVKLWSKEGS---LITTLEGHTYAIWDLAYSPDGST 1540

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +A          + +  K+GS    L   +++  A  +S  G +L  + +   D   KL+
Sbjct: 1541 LATASRDNT---VKLWSKEGSLITTLEGHTDVIWALAYSLDGSTLATASR---DKTVKLW 1594


>gi|302684523|ref|XP_003031942.1| hypothetical protein SCHCODRAFT_37220 [Schizophyllum commune H4-8]
 gi|300105635|gb|EFI97039.1| hypothetical protein SCHCODRAFT_37220 [Schizophyllum commune H4-8]
          Length = 387

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 92/245 (37%), Gaps = 21/245 (8%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              +G +  ++ + + + G  +  L    +  +    FSP+  +VA A+ D +    V +
Sbjct: 152 RGHAGYVSTTVRLWNVQTGQPVGDLMTGHNDEVNCVTFSPDSTRVAIASDDRK----VRV 207

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTN 299
            D         +       L   FS +G R + S   DE + ++  DL +     E L  
Sbjct: 208 WDVETQLPVGVLEGHDRPALCVAFSPDGTRLV-SGSVDETLRLW--DLATGQQIGEPLYG 264

Query: 300 TLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQ 357
                 S S+S D   I   S DR     + +  +    Q+R + +    +      S  
Sbjct: 265 HKSWVESVSFSSDGLYIASGSADRS----IRLWDAKSQLQRRGALEGHQDHVLSLALSSD 320

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
              +       +  AI +      +++ L      + + ++S  G+ ++ S  +DG    
Sbjct: 321 EVYLVAGSSDVDT-AIHLWDVKTGEQKPLTGHTDRVPSVSFSLDGKYVV-SGSRDGTV-- 376

Query: 417 KLYSI 421
           +++S+
Sbjct: 377 RVWSV 381



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 40/298 (13%), Positives = 90/298 (30%), Gaps = 42/298 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLW+    +Q  G+         + +A   S D   ++     D   R
Sbjct: 18  STIASGSYDCTVRLWNANTGQQ-QGEALRGHTDCVQSVA--FSPD-GAAVVSASEDCTLR 73

Query: 177 ILFVSES----VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +          V SG    ++ V D  G    + +      +    FS +  ++   +  
Sbjct: 74  LSVSISRDGKYVASGSHDGTVRVWDEGGRQQVWASHGHTDRVCAVAFSSDSTRI--VSGG 131

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +D +R++   +      +  G+   +    R                       ++Q+ 
Sbjct: 132 QDDTVRIWDAASGEQVGDELRGHAGYVSTTVR---------------------LWNVQTG 170

Query: 293 ATER-LTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                L       ++  ++SPDS+++   SD     ++ V          + +  +    
Sbjct: 171 QPVGDLMTGHNDEVNCVTFSPDSTRVAIASD---DRKVRVWDVETQLPVGVLEGHDRPAL 227

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLI 405
              +SP G  +           + +      Q   E L    S +++ ++S  G  + 
Sbjct: 228 CVAFSPDGTRLVSGSVDET---LRLWDLATGQQIGEPLYGHKSWVESVSFSSDGLYIA 282



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/221 (11%), Positives = 70/221 (31%), Gaps = 17/221 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               ++++    FSP+   +A  +YD    +R++  +T   +  + +      + +  FS
Sbjct: 1   MRGHERLVCSVAFSPDGSTIASGSYDC--TVRLWNANTG-QQQGEALRGHTDCVQSVAFS 57

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G   + + +        S+       + + +         +     Q V+ S   G  
Sbjct: 58  PDGAAVVSASEDCTLRLSVSISRDG---KYVASGSHDGTVRVWDEGGRQQVWASH--GHT 112

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQE 383
                 +  SD  RI    +        +  G+ +         +    + +      Q 
Sbjct: 113 DRVCAVAFSSDSTRIVSGGQDDTVRIWDAASGEQVGDELRGHAGYVSTTVRLWNVQTGQP 172

Query: 384 R---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +   +  +   T+SP    +  +     D   +++ +
Sbjct: 173 VGDLMTGHNDEVNCVTFSPDSTRVAIASD---DRKVRVWDV 210


>gi|23097917|ref|NP_691383.1| acylamino-acid-releasing enzyme [Oceanobacillus iheyensis HTE831]
 gi|22776141|dbj|BAC12418.1| acylamino-acid-releasing enzyme [Oceanobacillus iheyensis HTE831]
          Length = 598

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 49/272 (18%), Positives = 95/272 (34%), Gaps = 49/272 (18%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H + D + Q      G        V  S   G  K    +   +G  I  L  S +    
Sbjct: 56  HELKDRVLQVYHSPSGKHT-----VLASDFEGNEKQQFYLSSDNGKTIEDLVISPEHFHQ 110

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALI 274
              +SP++ K+ YA+ +  D     +    I    +      +    P  ++++GK  + 
Sbjct: 111 FGGWSPDESKITYAS-NRRDPGYFDIFTLNIKTKEEVTVFESNTNCTPLTWTADGKGIIF 169

Query: 275 SVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +         ++ +DL+S  T+ + N   +N+ A Y                        
Sbjct: 170 TYAVSNIDNQLHILDLESGKTKPIGN---VNVPARYH----------------------- 203

Query: 334 NGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                 ++++D   +    V + +G D +A  KF        + K D  +     E  ++
Sbjct: 204 ----SVQLTKD---NLSGYVVTDEGRDTLAIAKF-------HLEKPDSLEFIYKSEQWDI 249

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +    S   + L FS  + G +   +YS+D N
Sbjct: 250 EEVKVSADEKHLAFSLNEGGSSQLGIYSVDKN 281



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 41/117 (35%), Gaps = 6/117 (5%)

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFSGEKF 371
             F ++  G+ Q++ +   G        + +        SP G        F     ++F
Sbjct: 31  FTFLANLTGRPQVWKIDEKGKVSA--FHELKDRVLQVYHSPSGKHTVLASDFEGNEKQQF 88

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +        ++ ++  +   Q   WSP    + ++  +       ++++++  + E
Sbjct: 89  YLSSDNGKTIEDLVISPEHFHQFGGWSPDESKITYASNRRDPGYFDIFTLNIKTKEE 145


>gi|269125988|ref|YP_003299358.1| serine/threonine protein kinase with WD40 repeats [Thermomonospora
           curvata DSM 43183]
 gi|268310946|gb|ACY97320.1| serine/threonine protein kinase with WD40 repeats [Thermomonospora
           curvata DSM 43183]
          Length = 1256

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 84/244 (34%), Gaps = 31/244 (12%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-VYLMDTRIDRAPKRI 253
           V   D    R L             SP+ + VA A  D       V L D     AP+ +
Sbjct: 585 VALWDTGKGRSLARLSAGGSRGVALSPDGRLVAAAVTDAGPGRTPVRLWDVSNPSAPREL 644

Query: 254 G---NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFINISAS 308
               N  + + +  FS +G+   + +  +  + ++ +           LT       S +
Sbjct: 645 TVPANQPAKVASLAFSPDGRMLALGL-GNGRVRLWEIPATGAPRTLRTLTGHKGAVDSVA 703

Query: 309 YSPDSSQIVFESDREGKEQLY-----------VMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           ++P    +   +  +G  +L+              + G    R+SQ+K        +SP 
Sbjct: 704 FAPSGKLLA-SAGLDGTVRLWDPLDPERTSALAKVAGGEPNARLSQEK--ILRRVSFSPD 760

Query: 358 GDLIAFTKFSGE-KFAIGVMKKDGSQERLLV---EDSNLQAP------TWSPSGRSLIFS 407
           G  +A    S +  F +  ++  G   RL     E +    P       +SP G++L   
Sbjct: 761 GKTLAGPGDSKDIVFRLWDVQNPGKPRRLAAAKKEGAAFNCPGELLSTAFSPDGKTLATV 820

Query: 408 RKKD 411
             +D
Sbjct: 821 CNRD 824



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 77/211 (36%), Gaps = 26/211 (12%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-----IGNFRSMILAPRFSSNGKRAL 273
            FSP+ + +A +    +      ++  R    P       +    + +    FS +G+   
Sbjct: 948  FSPDGRILAVSEMAGKGGDARPVVRLRDTGRPGAPVVGTVTGLSNGVEDVSFSPDGRILA 1007

Query: 274  ISVQKD------EAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            ++   D          +   D+ +  A  +LT+        +++P  + +V  +     +
Sbjct: 1008 VADNNDFLPARTGPASVRLFDVSTPAAPRQLTSMRGEVYDVTFAPKGNLLVATT----AD 1063

Query: 327  QLYVMQSNGSDQK------RISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             L    +    +       R++ D  ++ +    + P G L+A +        +  ++ D
Sbjct: 1064 TLLSWNTADPSRPVQHPTLRLTPDAGDSGFATSAFRPDGGLLAVSDSRDTT-RLWRVQGD 1122

Query: 380  G--SQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                +  L+    + +   +SP GR+L ++ 
Sbjct: 1123 RIVGEPVLMRTVGSGKGLAFSPDGRTLAWTA 1153



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/205 (21%), Positives = 76/205 (37%), Gaps = 17/205 (8%)

Query: 174  NSRILFVSESVVSGIIKN---SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            + RIL VSE    G        L    R GA +          + +  FSP+ + +A A 
Sbjct: 951  DGRILAVSEMAGKGGDARPVVRLRDTGRPGAPVVGTVTGLSNGVEDVSFSPDGRILAVAD 1010

Query: 231  YD-----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             +           V L D     AP+++ + R  +    F+  G   L++   D  +   
Sbjct: 1011 NNDFLPARTGPASVRLFDVSTPAAPRQLTSMRGEVYDVTFAPKGN-LLVATTADTLLSWN 1069

Query: 286  SVDLQSNATE----RLTNTLFINISAS--YSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + D  S   +    RLT     +  A+  + PD   +   SD     +L+ +Q +    +
Sbjct: 1070 TADP-SRPVQHPTLRLTPDAGDSGFATSAFRPDGGLLA-VSDSRDTTRLWRVQGDRIVGE 1127

Query: 340  RISQDKEASYFDPVWSPQGDLIAFT 364
             +      S     +SP G  +A+T
Sbjct: 1128 PVLMRTVGSGKGLAFSPDGRTLAWT 1152



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 65/438 (14%), Positives = 125/438 (28%), Gaps = 114/438 (26%)

Query: 111  LVTGRVIKEGKDRLRVEFRLWDVKD------------------------RKQIIGKKFFS 146
            LV   V   G  R  V  RLWDV +                          +++     +
Sbjct: 615  LVAAAVTDAGPGRTPV--RLWDVSNPSAPRELTVPANQPAKVASLAFSPDGRMLALGLGN 672

Query: 147  SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
                  +I  T +    +++TG KG  +S + F     +         V   D  +    
Sbjct: 673  GRVRLWEIPATGAPRTLRTLTGHKGAVDS-VAFAPSGKLLASAGLDGTVRLWDPLDPERT 731

Query: 207  TP-------------SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +              S+++IL    FSP+ + +A      + + R  L D +    P+R+
Sbjct: 732  SALAKVAGGEPNARLSQEKILRRVSFSPDGKTLAGPGDSKDIVFR--LWDVQNPGKPRRL 789

Query: 254  G---------NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLF 302
                      N    +L+  FS +GK       +D  +       Q     RL       
Sbjct: 790  AAAKKEGAAFNCPGELLSTAFSPDGKTLATVCNRDTLLWNLPSPTQPRLVNRLAGMGDSA 849

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQS---------------------NGSDQKRI 341
                 +        +  +   G    YV  +                          +R+
Sbjct: 850  GRTGPALFASRGHRLLHATYGGVYLWYVENTLRLSSVATYGTVPSGFQVTTRFSGGPRRL 909

Query: 342  SQDKEASYF--------------------------DPVWSPQGDLIAFTKFSGEKFAIG- 374
               + A++                              +SP G ++A ++ +G+      
Sbjct: 910  LVIQGANFGLLVDLTGEGGMRRLAELPGSGQVGAQGADFSPDGRILAVSEMAGKGGDARP 969

Query: 375  -VMKKDGSQE------RLLVEDSNLQAPTWSPSGRSLI------FSRKKDGDTGSKLYSI 421
             V  +D  +        +    + ++  ++SP GR L       F   + G    +L+ +
Sbjct: 970  VVRLRDTGRPGAPVVGTVTGLSNGVEDVSFSPDGRILAVADNNDFLPARTGPASVRLFDV 1029

Query: 422  DLNGRNETLINTPAYASD 439
                    L +      D
Sbjct: 1030 STPAAPRQLTSMRGEVYD 1047


>gi|254388840|ref|ZP_05004072.1| protease [Streptomyces clavuligerus ATCC 27064]
 gi|294813134|ref|ZP_06771777.1| Putative protease [Streptomyces clavuligerus ATCC 27064]
 gi|326441567|ref|ZP_08216301.1| protease [Streptomyces clavuligerus ATCC 27064]
 gi|197702559|gb|EDY48371.1| protease [Streptomyces clavuligerus ATCC 27064]
 gi|294325733|gb|EFG07376.1| Putative protease [Streptomyces clavuligerus ATCC 27064]
          Length = 1148

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 18/192 (9%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+   R+ +  PRFS +G+R   +  +    +I+ V +      RLT+    +     ++
Sbjct: 46  RLTVDRTRLGHPRFSPDGRRIAYTNWRSLDPEIHLVPVAGGPARRLTHWGSADTRVCGWA 105

Query: 311 PDSSQIVFESDREGKEQL----YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           PD   +   S R          Y + ++G    R+     +         +   +  T  
Sbjct: 106 PDGHVLA-VSSRGQPFSYFSWAYSVPTDGGPGGRLPWGPVSDIAVADVEGEHRTLLLTGR 164

Query: 367 SGEKFAIGVMKKDGSQERLLVE--------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              + A     + G+  RL +            L  P +  +GR + F    +G     L
Sbjct: 165 PPHEPASWKRYRGGATGRLWLHGRRLLAGLGGQLDCPMF-VAGR-IAFLSDHEG--IGNL 220

Query: 419 YSIDLNGRNETL 430
           YS   +G +   
Sbjct: 221 YSCRPDGGDLRR 232



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 54/156 (34%), Gaps = 30/156 (19%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               RLT          +SPD  +I + + R    +++++   G   +R++    A    
Sbjct: 42  GRAWRLTVDRTRLGHPRFSPDGRRIAYTNWRSLDPEIHLVPVAGGPARRLTHWGSADTRV 101

Query: 352 PVWSPQGDLIAFTKFSGEKFAI----GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
             W+P G ++A +   G+ F+       +  DG     L          W P        
Sbjct: 102 CGWAPDGHVLAVSSR-GQPFSYFSWAYSVPTDGGPGGRLP---------WGP-------- 143

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-W 442
                   S +   D+ G + TL+ T     +P  W
Sbjct: 144 -------VSDIAVADVEGEHRTLLLTGRPPHEPASW 172



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 36/123 (29%), Gaps = 6/123 (4%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNT 300
           D   D   + I +    +    FS +G     S          +    +Q      +T+ 
Sbjct: 469 DIVADGVVELIRSVNGPVRDLAFSPDGSWLTWSHPGVGRSLRRVKLARIQDRTIVDVTDG 528

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYV----MQSNGSDQKRISQDKEASYFDPVWSP 356
            F + +  ++ D   + F S R       V    +      +  +     A+      SP
Sbjct: 529 RFEDENPVFTGDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSPFALSP 588

Query: 357 QGD 359
            G 
Sbjct: 589 DGR 591



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 59/182 (32%), Gaps = 15/182 (8%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP- 250
            + ++   G   R LT           ++P+   +A ++         +      D  P 
Sbjct: 77  EIHLVPVAGGPARRLTHWGSADTRVCGWAPDGHVLAVSSRGQPFSYFSWAYSVPTDGGPG 136

Query: 251 -KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-------ERLTNTLF 302
            +      S I         +  L++ +       +    +  AT        RL   L 
Sbjct: 137 GRLPWGPVSDIAVADVEGEHRTLLLTGRPPHEPASWK-RYRGGATGRLWLHGRRLLAGLG 195

Query: 303 INIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +    +   + +I F SD EG   LY  + +G D +R   D +A Y     S  G  +
Sbjct: 196 GQLDCPMFV--AGRIAFLSDHEGIGNLYSCRPDGGDLRR-HTDHDAFYARHASS-DGRRV 251

Query: 362 AF 363
            +
Sbjct: 252 VY 253



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 79/215 (36%), Gaps = 31/215 (14%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF-SPNQQKVAY---- 228
             RI F+S+    G     L     DG ++R      D   F  R  S + ++V Y    
Sbjct: 205 AGRIAFLSDHEGIGN----LYSCRPDGGDLR---RHTDHDAFYARHASSDGRRVVYQCAG 257

Query: 229 ---------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                    +       L V L   R  R P ++    S + A    + G+   +SV+  
Sbjct: 258 ELWIAEDLASPDAVPRRLEVRLGGPRTGRRPYQV-PAASHVDAVSVDTTGRACAVSVRGS 316

Query: 280 EAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQL---YVMQSNG 335
               +Y +  +      + +T  + +          ++ + +D  G++ +   Y+ +++G
Sbjct: 317 ----LYWLTHRDGPARTIADTPGVRVRLPVMLGGGGRVAYVTDAGGEDAVEIAYLPRASG 372

Query: 336 S-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             + +R+++       + V  P G+ +A     G 
Sbjct: 373 EREPRRLARGLLGHVHELVSDPAGERLAVASHDGR 407



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 8/111 (7%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNL 392
               + +       D  +SP G  + ++   G   ++  +K    Q+R +V+        
Sbjct: 474 GVVELIRSVNGPVRDLAFSPDGSWLTWSH-PGVGRSLRRVKLARIQDRTIVDVTDGRFED 532

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
           + P ++  GR L F   +  D    +++ DL+   G    L+   +    P
Sbjct: 533 ENPVFTGDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSP 583



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 7/125 (5%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG  +  L  S +  + +  FSP+   + ++       LR   +    DR    + + R
Sbjct: 472 ADG--VVELIRSVNGPVRDLAFSPDGSWLTWSHPGVGRSLRRVKLARIQDRTIVDVTDGR 529

Query: 258 SMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQ---SNATERLTNTLFINISASYSPD 312
                P F+ +G+       +  D   D+++ DL          +  +       + SPD
Sbjct: 530 FEDENPVFTGDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSPFALSPD 589

Query: 313 SSQIV 317
                
Sbjct: 590 GRPAA 594


>gi|148656279|ref|YP_001276484.1| WD-40 repeat-containing protein [Roseiflexus sp. RS-1]
 gi|148568389|gb|ABQ90534.1| WD-40 repeat protein [Roseiflexus sp. RS-1]
          Length = 1041

 Score = 69.7 bits (169), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 84/287 (29%), Gaps = 39/287 (13%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           + R+WDV     I  ++        R +A   + D                      + S
Sbjct: 513 DIRIWDVSTGTVI--RRLSGHTGWIRSLA--FAPD-------------------GTLLAS 549

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    ++ + D     +          +    FSP+   +A A+ D    L        I
Sbjct: 550 GSTDQTVRIWDAATGQLLATLRGHTGFIGGVAFSPDSATLASASRDGSVRLWDVASGKEI 609

Query: 247 DRAPKRI-----GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERL--- 297
                R       N R       FS +GK   +   +     +Y +D  S     +L   
Sbjct: 610 SGFSFRTALDPTTNLRYWATGVTFSPDGKTLAVGSTEG---VVYLIDATSGQIIHQLRGH 666

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN + I    ++SPD   +           + +       Q  +        F    SP 
Sbjct: 667 TNWIVI-RGLAFSPDGKTLY---SAGLDATVRIWDVERGVQTAMLDVHRLDIFSIAISPD 722

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           G+ +A       +  +  + +      L +    + +  +SP    L
Sbjct: 723 GERLASVSDQEGRVIVWDLMQQRPDLNLRIGLGLITSLVFSPDSEVL 769



 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 77/217 (35%), Gaps = 27/217 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S +   +A    DD D   + + D       +R+      I +  F+ +G     S  
Sbjct: 496 AWSADSTLLASGASDDND---IRIWDVSTGTVIRRLSGHTGWIRSLAFAPDGTLLA-SGS 551

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D+ + I+  D  +      L          ++SPDS+ +   S R+G  +L+ + ++G 
Sbjct: 552 TDQTVRIW--DAATGQLLATLRGHTGFIGGVAFSPDSATLASAS-RDGSVRLWDV-ASGK 607

Query: 337 DQKRISQDK--------EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLV 387
           +    S                   +SP G  +A     G    + ++     Q    L 
Sbjct: 608 EISGFSFRTALDPTTNLRYWATGVTFSPDGKTLAVGSTEG---VVYLIDATSGQIIHQLR 664

Query: 388 EDSNL---QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +N    +   +SP G++L        D   +++ +
Sbjct: 665 GHTNWIVIRGLAFSPDGKTLY---SAGLDATVRIWDV 698



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 73/241 (30%), Gaps = 23/241 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                 N + + D     +          +    F+P+   +A  + D      V + D 
Sbjct: 506 SGASDDNDIRIWDVSTGTVIRRLSGHTGWIRSLAFAPDGTLLASGSTDQ----TVRIWDA 561

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--------- 295
              +    +      I    FS +      S  +D ++ ++  D+ S             
Sbjct: 562 ATGQLLATLRGHTGFIGGVAFSPDSATLA-SASRDGSVRLW--DVASGKEISGFSFRTAL 618

Query: 296 -RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDP- 352
              TN  +     ++SPD   +   S       +Y++ +       ++            
Sbjct: 619 DPTTNLRYWATGVTFSPDGKTLAVGSTEG---VVYLIDATSGQIIHQLRGHTNWIVIRGL 675

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP G  + ++        I  +++      L V   ++ +   SP G  L     ++G
Sbjct: 676 AFSPDGKTL-YSAGLDATVRIWDVERGVQTAMLDVHRLDIFSIAISPDGERLASVSDQEG 734

Query: 413 D 413
            
Sbjct: 735 R 735



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 89/286 (31%), Gaps = 38/286 (13%)

Query: 127 EFRLWDVKDRKQIIGKKFFS---SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
             RLWDV   K+I G  F +      + R                    + + + F  + 
Sbjct: 597 SVRLWDVASGKEISGFSFRTALDPTTNLR-------------------YWATGVTFSPDG 637

Query: 184 VVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRV 239
               +      V   D   G  I  L    + I+     FSP+ + +    Y       V
Sbjct: 638 KTLAVGSTEGVVYLIDATSGQIIHQLRGHTNWIVIRGLAFSPDGKTL----YSAGLDATV 693

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D         +   R  I +   S +G+R      ++  + ++ + +Q      L  
Sbjct: 694 RIWDVERGVQTAMLDVHRLDIFSIAISPDGERLASVSDQEGRVIVWDL-MQQRPDLNLRI 752

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            L +  S  +SPDS  +       G   +  ++   +DQ R       S     + P G 
Sbjct: 753 GLGLITSLVFSPDSEVL----GSVGYNGIIQLRLLANDQVRQFAGSATSVQSLAFLPNGR 808

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +A          I  +++  S  R +       A    P G  + 
Sbjct: 809 -LATLTEQDTVRLIDFVQETTSDLRGMTGTPLCIAAD--PGGSVVA 851



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 51/161 (31%), Gaps = 15/161 (9%)

Query: 264 RFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            +S +G+   +   +     D  ++D +        +      S ++S DS+ +   S  
Sbjct: 455 AYSPDGRLLAVGVSEAVSLHDATTLDDRGT----WFDHTGKITSLAWSADSTLLA--SGA 508

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                + +   +     R             ++P G L+A          + +      Q
Sbjct: 509 SDDNDIRIWDVSTGTVIRRLSGHTGWIRSLAFAPDGTLLASGSTDQT---VRIWDAATGQ 565

Query: 383 E--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               L      +    +SP   +L  S  +DG    +L+ +
Sbjct: 566 LLATLRGHTGFIGGVAFSPDSATLA-SASRDGSV--RLWDV 603



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 8/159 (5%)

Query: 179  FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
            FV+ +      +  +  +  DG  ++ L+  ++ I     F P      +A    + +LR
Sbjct: 891  FVAAAGTPNDPRIEIWRV-SDGQRVQTLSGMQNAITSI-AFQPGGT--LFAATGTDGVLR 946

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            ++   T +     R         A  FS +G     +      M  ++         R+ 
Sbjct: 947  MWNYRTGVSERNIRAAPEDGWFTALAFSPDGALLA-TGTPTGVMQFWN-PASGAEMGRVE 1004

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                I ++ ++SPD  Q+   + R+    +Y     GS 
Sbjct: 1005 QQFGI-LALAFSPDGVQLA-AAGRDAGVTIYRAVRAGSS 1041



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 68/193 (35%), Gaps = 9/193 (4%)

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-KD 279
            P    VA    D      V L +    R  + +      +     SS+G+    +    D
Sbjct: 845  PGGSVVAVGASDG----TVVLWEGSTGRLVRSLKTDLPAVFLVALSSDGEFVAAAGTPND 900

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              ++I+ V       + L+       S ++ P  +        +G  +++  ++  S++ 
Sbjct: 901  PRIEIWRVS-DGQRVQTLSGMQNAITSIAFQPGGTLFAATGT-DGVLRMWNYRTGVSERN 958

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
              +  ++  +    +SP G L+A    +            G++   + +   + A  +SP
Sbjct: 959  IRAAPEDGWFTALAFSPDGALLA--TGTPTGVMQFWNPASGAEMGRVEQQFGILALAFSP 1016

Query: 400  SGRSLIFSRKKDG 412
             G  L  + +  G
Sbjct: 1017 DGVQLAAAGRDAG 1029



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 75/240 (31%), Gaps = 25/240 (10%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + ++F  +S V G +  +  +  R  AN +          +    F PN +       D 
Sbjct: 758 TSLVFSPDSEVLGSVGYNGIIQLRLLANDQVRQFAGSATSVQSLAFLPNGRLATLTEQDT 817

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQ 290
             ++      T          + R M   P        G    +    D  + ++     
Sbjct: 818 VRLIDFVQETT---------SDLRGMTGTPLCIAADPGGSVVAVGAS-DGTVVLWE---- 863

Query: 291 SNATERLTNTLFINISASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
             +T RL  +L  ++ A +    S D  + V  +      ++ + + +   + +     +
Sbjct: 864 -GSTGRLVRSLKTDLPAVFLVALSSDG-EFVAAAGTPNDPRIEIWRVSDGQRVQTLSGMQ 921

Query: 347 ASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +     + P G L A T   G  +             R   ED    A  +SP G  L 
Sbjct: 922 NAITSIAFQPGGTLFAATGTDGVLRMWNYRTGVSERNIRAAPEDGWFTALAFSPDGALLA 981


>gi|323345219|ref|ZP_08085442.1| dipeptidyl-peptidase IV [Prevotella oralis ATCC 33269]
 gi|323093333|gb|EFZ35911.1| dipeptidyl-peptidase IV [Prevotella oralis ATCC 33269]
          Length = 734

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 58/160 (36%), Gaps = 25/160 (15%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T     +  A  S D  QIV  S + GK+   +   + +  ++I+     S+     SP
Sbjct: 42  ITPIEGTDRYARISSDGKQIVEYSFKTGKQTGVLFDVDNTMGEKIT-----SFDGYTMSP 96

Query: 357 QGDLI--------AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            G  +         + +     F I  +     + + L +    Q P WSP G  + F R
Sbjct: 97  DGKKMLIQTKTEPIYRRSFRAVFYIYTIS--SRKLQRLSDGGPQQVPVWSPDGNQIAFVR 154

Query: 409 KKDGDTGSKLYS-----IDLNGRNETLINTPAYASDPQWV 443
             +      LY      +  +GR   +IN       P WV
Sbjct: 155 DNNIYLVKLLYDNAESQVTKDGRKNEVINGV-----PDWV 189



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 22/157 (14%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I          R SS+GK+ +    K         D+ +   E++T+        + SPD
Sbjct: 42  ITPIEGTDRYARISSDGKQIVEYSFKTGKQTGVLFDVDNTMGEKITSFDGY----TMSPD 97

Query: 313 SSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +++ ++       R  +   Y+   +    +R+S         PVWSP G+ IAF + 
Sbjct: 98  GKKMLIQTKTEPIYRRSFRAVFYIYTISSRKLQRLSDGGPQQV--PVWSPDGNQIAFVRD 155

Query: 367 SGEKFAIGVMKK--DGSQERLLVEDSNLQ----APTW 397
           +     I ++K   D ++ ++  +    +     P W
Sbjct: 156 N----NIYLVKLLYDNAESQVTKDGRKNEVINGVPDW 188



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 37/98 (37%), Gaps = 12/98 (12%)

Query: 220 SPNQQKVAYAT----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ +K+   T            V+ + T   R  +R+ +     + P +S +G +    
Sbjct: 95  SPDGKKMLIQTKTEPIYRRSFRAVFYIYTISSRKLQRLSDGGPQQV-PVWSPDGNQIAFV 153

Query: 276 VQKDEAMDIYSVDLQSNATERLTNT----LFINISASY 309
             +D  + +  + L  NA  ++T        IN    +
Sbjct: 154 --RDNNIYLVKL-LYDNAESQVTKDGRKNEVINGVPDW 188


>gi|221635973|ref|YP_002523849.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Thermomicrobium roseum DSM 5159]
 gi|221157355|gb|ACM06473.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Thermomicrobium roseum DSM 5159]
          Length = 667

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 76/240 (31%), Gaps = 34/240 (14%)

Query: 177 ILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           I++V    S      ++SL ++       R  T        EPR+SP+   +A+ +   E
Sbjct: 41  IVYVVRPVSREEEHWRSSLWIVPFMEGEARQFTSGLWH-DREPRWSPDGGWIAFLSDRAE 99

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                  +  R      R+ +    I    +S +G+     + + E  +           
Sbjct: 100 RGKTSVYLIPRNGGEALRVFDQAGEIDNLSWSPDGRFLAFLMVEPETEEEKQ-------- 151

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                    + +  +  D              +L+++       + +S ++   +    W
Sbjct: 152 ----RRERRDDARVWDADWKYR----------RLWLLDVRTRAARVVSPERVQVW-AYAW 196

Query: 355 SPQGDLIAF----TKFSGEKFA---IGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIF 406
           +P    +A     T    + F    + ++  +  + R L       +   WS  G  L +
Sbjct: 197 APDSARLALAVSGTPRVDDVFRVTSVALLDIESGEYRELFTMRGVAEDLVWSADGEWLAY 256



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 8/103 (7%)

Query: 350 FDPVWSPQGDLIAFT----KFSGEKFA--IGVMKKDGSQERLLVED-SNLQAPTWSPSGR 402
           FD   +P G+ I +         E +   + ++     + R       + + P WSP G 
Sbjct: 30  FDVEVAPDGETIVYVVRPVSREEEHWRSSLWIVPFMEGEARQFTSGLWHDREPRWSPDGG 89

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            + F   +     + +Y I  NG     + +      +  W  
Sbjct: 90  WIAFLSDRAERGKTSVYLIPRNGGEALRVFDQAGEIDNLSWSP 132



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 67/186 (36%), Gaps = 21/186 (11%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI---- 246
             L ++D      R ++P R Q+ +   ++P+  ++A A      +  V+ + +      
Sbjct: 169 RRLWLLDVRTRAARVVSPERVQV-WAYAWAPDSARLALAVSGTPRVDDVFRVTSVALLDI 227

Query: 247 -DRAPKRIGNFRSMILAPRFSSNGKRALISV---QKDEAMDIYSVDLQSNATERLTNTLF 302
                + +   R +     +S++G+         +      ++   ++    E LT    
Sbjct: 228 ESGEYRELFTMRGVAEDLVWSADGEWLAYRGPLGRVVHGEAVFRRRVRGGEAECLTAGYR 287

Query: 303 INISA-----------SYSPDS-SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             +                 +     V+  + +G+++L   ++ GS   R+S   + + +
Sbjct: 288 GTVEHLGPYRQGEALVVVGYEGLDARVYRLEWDGEQRLLCPRTTGSWHGRVSGSGDGTRW 347

Query: 351 DPVWSP 356
             VWS 
Sbjct: 348 AGVWSD 353


>gi|83859080|ref|ZP_00952601.1| putative enzyme [Oceanicaulis alexandrii HTCC2633]
 gi|83852527|gb|EAP90380.1| putative enzyme [Oceanicaulis alexandrii HTCC2633]
          Length = 682

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 76/270 (28%), Gaps = 46/270 (17%)

Query: 219 FSPNQQKVAYATYDDEDI--------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            SP+ ++VA+      ++         R  L       A +   +  S I    +S  G 
Sbjct: 44  ISPDGEQVAFTLSVPRNVVAGEEDGAPRAELYVASGPDAARLYVSDESYISGAHWSPQGD 103

Query: 271 RALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-- 326
                 ++D      +Y + +      R+        S   +PD   + F +  +     
Sbjct: 104 GLTYLTRRDGDTGSALYEIPVDGGQARRIFAHDASIQSYVIAPDGETLFFIARDKADPVQ 163

Query: 327 --------------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-- 364
                                ++    + +D + +  D        V S  G  +A    
Sbjct: 164 SELRDRGFMANVYEENDVFSHVWRADLSDTDAEPVRFDLPGHASSLVLSEDGSRLAVALA 223

Query: 365 -------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF--SRKKDGDTG 415
                       ++ + V   +GS    +  +  +    +SP    L F  +  +   T 
Sbjct: 224 PTTLVDDSLMERQWHV-VNAANGSVVSTIETEGKIGMAAFSPDSARLAFIAAADRADPTA 282

Query: 416 SKLYSIDLNGRNETLINTPAY--ASDPQWV 443
             L+  D        +   A    S   W+
Sbjct: 283 GTLHVADAASGEFRALARDAEQHVSQLAWI 312



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 83/293 (28%), Gaps = 40/293 (13%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V      G  +  L V    G +   L  S +  +    +SP    + Y T  D D    
Sbjct: 61  VVAGEEDGAPRAELYVAS--GPDAARLYVSDESYISGAHWSPQGDGLTYLTRRDGDTGSA 118

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------------- 277
                      +RI    + I +   + +G+      +                      
Sbjct: 119 LYEIPVDGGQARRIFAHDASIQSYVIAPDGETLFFIARDKADPVQSELRDRGFMANVYEE 178

Query: 278 KDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFE------SDREGKEQLYV 330
            D    ++  DL     E +         S   S D S++          D    E+ + 
Sbjct: 179 NDVFSHVWRADLSDTDAEPVRFDLPGHASSLVLSEDGSRLAVALAPTTLVDDSLMERQWH 238

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQERLL 386
           + +  +     + + E       +SP    +AF     +       + V      + R L
Sbjct: 239 VVNAANGSVVSTIETEGKIGMAAFSPDSARLAFIAAADRADPTAGTLHVADAASGEFRAL 298

Query: 387 VEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             D+        W     S++        TG+ L   ++NGR E    T A  
Sbjct: 299 ARDAEQHVSQLAWI-DRDSILTVASVG--TGTALVEYNINGREERRTPTEAGV 348



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 13/121 (10%)

Query: 259 MILAPRFSSNGKRALISVQ---------KDEAMDIYSVDLQSNATERL-TNTLFINISAS 308
            +     S +G++   ++          +D A              RL  +       A 
Sbjct: 38  QVSGVDISPDGEQVAFTLSVPRNVVAGEEDGAPRAELYVASGPDAARLYVSDESYISGAH 97

Query: 309 YSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +SP    + + + R+G     LY +  +G   +RI    +AS    V +P G+ + F   
Sbjct: 98  WSPQGDGLTYLTRRDGDTGSALYEIPVDGGQARRI-FAHDASIQSYVIAPDGETLFFIAR 156

Query: 367 S 367
            
Sbjct: 157 D 157


>gi|32472611|ref|NP_865605.1| peptidase yuxL [Rhodopirellula baltica SH 1]
 gi|32443848|emb|CAD73289.1| similar to peptidase yuxL [Rhodopirellula baltica SH 1]
          Length = 344

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 64/136 (47%), Gaps = 20/136 (14%)

Query: 325 KEQLYVMQSNGSDQKRI-----SQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAI 373
           ++ L++ + +G+  + +      +++  S   P  S  G  IAF  ++ +      +  I
Sbjct: 45  RQILHLCKPDGTPIRPLVLDESLRERFDSQGKPEISADGKWIAFDAWTNDFKRTRQESKI 104

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-----KKDGDTGSKLYSIDLNGRNE 428
            ++  DG +   +++ S    P++SP G+ L+FSR       DG  G+ ++ +D++G N 
Sbjct: 105 VIVDFDGQKTTNIIDGSL---PSFSPDGKRLVFSRPRRYTNTDGAEGTSIWIMDIDGDNR 161

Query: 429 TLINTPAYASDPQWVG 444
            ++     A   +W  
Sbjct: 162 MMVAHRG-AWGGRWSP 176



 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 88/291 (30%), Gaps = 37/291 (12%)

Query: 185 VSGIIKNSLCVMDRDGANIRYL-----TPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            +   +  L +   DG  IR L        R     +P  S + + +A+  + ++     
Sbjct: 40  PTQPERQILHLCKPDGTPIRPLVLDESLRERFDSQGKPEISADGKWIAFDAWTNDFKRTR 99

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-----VQKDE--AMDIYSVDLQSN 292
                 I     +          P FS +GKR + S        D      I+ +D+  +
Sbjct: 100 QESKIVIVDFDGQKTTNIIDGSLPSFSPDGKRLVFSRPRRYTNTDGAEGTSIWIMDIDGD 159

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQ------LYVMQSNGSDQKRISQDKE 346
               + +         +SPD   IVF               L +          I    +
Sbjct: 160 NRMMVAHRGAW--GGRWSPDGKSIVFFGGENENGIAVPKSCLRLFDIETQTTTNIFSPDD 217

Query: 347 ASY----FDPVWS-PQGDLIAFTKFSGEKFAIG--VMKKDGSQERLLVEDSNLQ------ 393
           + +    F   W+      + F     +   +   V++ D     L+V   +        
Sbjct: 218 SPFGELSFHFEWAKDDSRRVVFGGPLKDTQELATGVIQVDEGISSLMVRTGDTMEAGLLH 277

Query: 394 --APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA--SDP 440
             +  W+P G S + +            SIDL   ++T    P     SDP
Sbjct: 278 GSSYDWNPKGNSFLMAGTVGDRVLPIAVSIDLVEASQTFDGIPENVSTSDP 328



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 68/213 (31%), Gaps = 40/213 (18%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             +   G    S+ +MD DG N   +        +  R+SP+ + + +   ++E+ + V 
Sbjct: 139 RYTNTDGAEGTSIWIMDIDGDNRMMVAHRG---AWGGRWSPDGKSIVFFGGENENGIAVP 195

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSS-------------NGKRALI------------- 274
               R+     +       I +P  S              + +R +              
Sbjct: 196 KSCLRLFDIETQTTT---NIFSPDDSPFGELSFHFEWAKDDSRRVVFGGPLKDTQELATG 252

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +Q DE +    V         L +    +    ++P  +  +       +     +  +
Sbjct: 253 VIQVDEGISSLMVRTGDTMEAGLLHGSSYD----WNPKGNSFLMAGTVGDRVLPIAVSID 308

Query: 335 GSDQKRISQDK---EASYFDPVWSPQGDLIAFT 364
             +  + + D      S  DP+ +P G+ +  +
Sbjct: 309 LVEASQ-TFDGIPENVSTSDPIHTPDGNHLIVS 340


>gi|156743428|ref|YP_001433557.1| WD-40 repeat-containing serine/threonine protein kinase
           [Roseiflexus castenholzii DSM 13941]
 gi|156234756|gb|ABU59539.1| serine/threonine protein kinase with WD40 repeats [Roseiflexus
           castenholzii DSM 13941]
          Length = 1039

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 83/287 (28%), Gaps = 39/287 (13%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E R+WDV   + +  ++        R IA               G              S
Sbjct: 511 EIRIWDVSTGRVV--RRLSGHTGWIRSIA-----------FAPNGTLL----------AS 547

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    ++ + D     +          +    FSP+   +A A+ D    L        I
Sbjct: 548 GSTDQTVRIWDAATGQLLATLSGHTGFIGGVVFSPDSTTLASASRDGSVRLWDVASGREI 607

Query: 247 DRAPKRI-----GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERL--- 297
                R       N R       FS +GK   +   +     +Y +D  +     +L   
Sbjct: 608 SGFNFRTPLDPDTNLRYWATGVAFSPDGKALAVGSTEG---VVYLLDAATGQVIHQLRGH 664

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN + I    +++PD   +           + +       Q  +        F    SP 
Sbjct: 665 TNWIVI-RGLAFAPDGKTLY---SAGLDATVRIWDVERGVQTGVLDVHRLDIFSIAISPN 720

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           G+ +A       +  +  + +      L +    + +  +SP    L
Sbjct: 721 GERLASVSDQEGRMIVWDLTQQRPDMNLRIGLGLVTSLVFSPDSEVL 767



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 75/242 (30%), Gaps = 23/242 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                 N + + D     +          +    F+PN   +A  + D      V + D 
Sbjct: 504 SGASDDNEIRIWDVSTGRVVRRLSGHTGWIRSIAFAPNGTLLASGSTDQ----TVRIWDA 559

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-------ERL 297
              +    +      I    FS +      S  +D ++ ++  D+ S            L
Sbjct: 560 ATGQLLATLSGHTGFIGGVVFSPDSTTLA-SASRDGSVRLW--DVASGREISGFNFRTPL 616

Query: 298 ---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDP- 352
              TN  +     ++SPD   +   S       +Y++ +       ++            
Sbjct: 617 DPDTNLRYWATGVAFSPDGKALAVGSTEG---VVYLLDAATGQVIHQLRGHTNWIVIRGL 673

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            ++P G  + ++        I  +++      L V   ++ +   SP+G  L     ++G
Sbjct: 674 AFAPDGKTL-YSAGLDATVRIWDVERGVQTGVLDVHRLDIFSIAISPNGERLASVSDQEG 732

Query: 413 DT 414
             
Sbjct: 733 RM 734



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 73/217 (33%), Gaps = 27/217 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S +   +A       D   + + D    R  +R+      I +  F+ NG     S  
Sbjct: 494 AWSADSTLLA---SGASDDNEIRIWDVSTGRVVRRLSGHTGWIRSIAFAPNGTLLA-SGS 549

Query: 278 KDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D+ + I+  D  +      L+          +SPDS+ +   S R+G  +L+ + ++G 
Sbjct: 550 TDQTVRIW--DAATGQLLATLSGHTGFIGGVVFSPDSTTLASAS-RDGSVRLWDV-ASGR 605

Query: 337 DQKRISQDKE--------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +    +                   +SP G  +A     G    + ++     Q    + 
Sbjct: 606 EISGFNFRTPLDPDTNLRYWATGVAFSPDGKALAVGSTEG---VVYLLDAATGQVIHQLR 662

Query: 389 DSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSI 421
                       ++P G++L        D   +++ +
Sbjct: 663 GHTNWIVIRGLAFAPDGKTLY---SAGLDATVRIWDV 696



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 67/220 (30%), Gaps = 34/220 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + +A    +      V L D           +    I +  +S++         
Sbjct: 453 AYSPDGRLLAVGISEA-----VSLHDATTLDDLGTWFDHTGKITSLAWSADSTLLASGAS 507

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + I+ V        RL+       S +++P+ + +   S     + + +  +    
Sbjct: 508 DDNEIRIWDVS-TGRVVRRLSGHTGWIRSIAFAPNGTLLASGST---DQTVRIWDAATGQ 563

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-- 395
                          V+SP    +A     G    + +      +E   +   N + P  
Sbjct: 564 LLATLSGHTGFIGGVVFSPDSTTLASASRDGS---VRLWDVASGRE---ISGFNFRTPLD 617

Query: 396 ------------TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                        +SP G++L       G T   +Y +D 
Sbjct: 618 PDTNLRYWATGVAFSPDGKALAV-----GSTEGVVYLLDA 652



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 59/160 (36%), Gaps = 8/160 (5%)

Query: 178  LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
             FV+ +      +  +  +  DG  ++ L+  ++ I     F P      +A    + +L
Sbjct: 888  AFVAAAGTPNDPRIEIWRV-ADGQRVQTLSGMQNSITSI-AFQPRGT--LFAATGTDGVL 943

Query: 238  RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            R++   T       +         A  FS +G   L +      +  ++         ++
Sbjct: 944  RMWNYRTGASERNIKAAPENGWFTALAFSPDGA-ILATGTPTGVVQFWN-PANGAEMAQV 1001

Query: 298  TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 + ++ ++SPD +Q+   + R+    LY    +GS 
Sbjct: 1002 QQQFGV-LALTFSPDGAQLA-AAGRDAGVTLYRAVRSGSS 1039



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 23/175 (13%), Positives = 63/175 (36%), Gaps = 5/175 (2%)

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERL 297
            V + +    +  + +      +     S +G     +    D  ++I+ V       + L
Sbjct: 857  VAIWNGADGQFLRSLKTDLPAVFLVAVSDDGAFVAAAGTPNDPRIEIWRV-ADGQRVQTL 915

Query: 298  TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            +       S ++ P  +        +G  +++  ++  S++   +  +   +    +SP 
Sbjct: 916  SGMQNSITSIAFQPRGTLFAATGT-DGVLRMWNYRTGASERNIKAAPENGWFTALAFSPD 974

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            G ++A    +           +G++   + +   + A T+SP G  L  + +  G
Sbjct: 975  GAILA--TGTPTGVVQFWNPANGAEMAQVQQQFGVLALTFSPDGAQLAAAGRDAG 1027


>gi|116624381|ref|YP_826537.1| peptidase S9B dipeptidylpeptidase IV subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116227543|gb|ABJ86252.1| peptidase S9B, dipeptidylpeptidase IV domain protein [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 724

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 55/367 (14%), Positives = 124/367 (33%), Gaps = 53/367 (14%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
           LI          NP +     DW +  A+    G +      +  +     D+       
Sbjct: 74  LIDTTPIDAAAVNPPAADGPTDWTNRRARA---GGMQFSADGQSLLYATGGDLFLIHPAT 130

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS-RILFVSESVVSGIIKNSLCVMDRD 199
           GK    +     ++   +S D          D  +     + E+ ++     +L     D
Sbjct: 131 GKWDQLTKTPVPELDAKLSPDTSAVAFRRGWDLYTVNTATLKETRLTKDGSETLRNGIPD 190

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED---ILRVYLMDTRIDRAPKR---- 252
                ++ P    +     +SP+ + + Y  +D           ++ TR    P+R    
Sbjct: 191 -----WVYPEELTLGTGFWWSPDSKSLCYLQFDSSREPVFPHADMLGTRAFAEPERYPQA 245

Query: 253 -----------------------IGNFRSMILAPR--FSSNGKRALISVQKDEAMD---I 284
                                  +G+ R+  L  R  +  N  R +  ++ +   +   +
Sbjct: 246 GENNPDIHLGIIAATGGPTKWLEVGDTRNAFLIARAGWMPN-SRGVYMLRMNRVQNKIEM 304

Query: 285 YSVDLQSNATERL---TNTLFINISA--SYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
            ++D +S     +   ++  +IN+     +  D  + ++ S R+G  + +++  ++G   
Sbjct: 305 ITIDAESGEAASVFKESDPFWINLEGDIEFLKDGKRFLWTSQRDGGYRHIFISSNDGKSI 364

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPT 396
           K++++              GD I FT       +  +  +K DG+ +R L   +     +
Sbjct: 365 KQLTKGPWEVTAINAVDEAGDRIYFTSTEPTPLERHLYTIKLDGTGKRQLTAANFTHNVS 424

Query: 397 WSPSGRS 403
            SP+G  
Sbjct: 425 VSPNGAY 431



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 49/295 (16%), Positives = 95/295 (32%), Gaps = 78/295 (26%)

Query: 216 EPRFSPNQQKVA------YATYDDEDILRVYLMDTR----------IDRAPKRIGNFRSM 259
            P + P+ +            YD        L+DT               P    N R+ 
Sbjct: 43  PPTWMPDGKTFVTRQGRSLMVYDPATQTSKLLIDTTPIDAAAVNPPAADGPTDWTNRRAR 102

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
               +FS++G+  L +       D++ +   +   ++LT T    + A  SPD+S + F 
Sbjct: 103 AGGMQFSADGQSLLYAT----GGDLFLIHPATGKWDQLTKTPVPELDAKLSPDTSAVAF- 157

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQGDLIAF 363
             R G + LY + +    + R+++D   +  + +                WSP    + +
Sbjct: 158 --RRGWD-LYTVNTATLKETRLTKDGSETLRNGIPDWVYPEELTLGTGFWWSPDSKSLCY 214

Query: 364 TKFSGEK------------------------------FAIGVMKKDGSQERLL----VED 389
            +F   +                                +G++   G   + L      +
Sbjct: 215 LQFDSSREPVFPHADMLGTRAFAEPERYPQAGENNPDIHLGIIAATGGPTKWLEVGDTRN 274

Query: 390 SNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           + L A   W P+ R +   R        ++ +ID        +      SDP W+
Sbjct: 275 AFLIARAGWMPNSRGVYMLRMNRVQNKIEMITIDAESGEAASVF---KESDPFWI 326



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 45/164 (27%), Gaps = 40/164 (24%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---------------------SQDK 345
            ++ PD    V    R+G+  L V        K +                       ++
Sbjct: 44  PTWMPDGKTFV---TRQGRS-LMVYDPATQTSKLLIDTTPIDAAAVNPPAADGPTDWTNR 99

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSL 404
            A      +S  G  + +         + ++     +   L +    +     SP   ++
Sbjct: 100 RARAGGMQFSADGQSLLYA----TGGDLFLIHPATGKWDQLTKTPVPELDAKLSPDTSAV 155

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPA----YASDPQWVG 444
            F        G  LY+++     ET +            P WV 
Sbjct: 156 AF------RRGWDLYTVNTATLKETRLTKDGSETLRNGIPDWVY 193


>gi|254417275|ref|ZP_05031019.1| hypothetical protein MC7420_8199 [Microcoleus chthonoplastes PCC
           7420]
 gi|196175928|gb|EDX70948.1| hypothetical protein MC7420_8199 [Microcoleus chthonoplastes PCC
           7420]
          Length = 442

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 90/265 (33%), Gaps = 56/265 (21%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +  I N++ + D        +     Q +    F+P+ Q +A  + D      + L DTR
Sbjct: 169 TNTINNTIQLWDIQTEQKHLILKGHSQPVLSIAFNPHAQTLASGSADH----TIKLWDTR 224

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  + +  +    LA  FS +G     S   D  + ++  D  + A +R+       I
Sbjct: 225 TGQQKRSLKGYFYYFLAVAFSPDGLTLA-SGSADCTVKLW--DANTLAQKRIFKGHGDKI 281

Query: 306 SA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              ++SPD   +   S R+G  +L+ ++S+  +        +   +  ++SP G  +A  
Sbjct: 282 HTVAFSPDGQILASGS-RDGMIKLWDVRSSVRNDTITLNGHQRGIYAVIFSPDGQWLASG 340

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQ------------------------------- 393
                 + I V      QER  ++    Q                               
Sbjct: 341 SAD---WTIKVWDMRTGQERYTLKGHTDQVRCLAFSLDSKILVSGSCDQTLKLWNLEDGE 397

Query: 394 -------------APTWSPSGRSLI 405
                        +  +SP G+ LI
Sbjct: 398 LIDTLSDHAGAVTSVVFSPDGQRLI 422



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 55/352 (15%), Positives = 121/352 (34%), Gaps = 47/352 (13%)

Query: 56  VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ-------KITNPDSIPRFQDWNSLGA 108
            ++D L  +++E+ S        F    + +          +   PD+IPR+Q  N++  
Sbjct: 96  TNLDSLPSQITELQSA----IAQF-PTPEPNSPTIEPAVEIQPLLPDTIPRWQCVNTITG 150

Query: 109 QVLVTGRVIKEGKDRLRVE------FRLWDVKD-RKQIIGKKFFSSPASWRKIAHT---- 157
            +     +      ++          +LWD++  +K +I K       S     H     
Sbjct: 151 NLAPITTLTLHPDGQIIATNTINNTIQLWDIQTEQKHLILKGHSQPVLSIAFNPHAQTLA 210

Query: 158 --ISDDIY--------QSITGEKGDFNSRILFVSE----SVVSGIIKNSLCVMDRDGANI 203
              +D           Q     KG F   +         ++ SG    ++ + D +    
Sbjct: 211 SGSADHTIKLWDTRTGQQKRSLKGYFYYFLAVAFSPDGLTLASGSADCTVKLWDANTLAQ 270

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       +    FSP+ Q +A  + D   +++++ + + +      +   +  I A 
Sbjct: 271 KRIFKGHGDKIHTVAFSPDGQILASGSRD--GMIKLWDVRSSVRNDTITLNGHQRGIYAV 328

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDR 322
            FS +G+    S   D  + ++  D+++             +   ++S DS  +V  S  
Sbjct: 329 IFSPDGQWLA-SGSADWTIKVW--DMRTGQERYTLKGHTDQVRCLAFSLDSKILVSGSC- 384

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              + L +      +      D   +    V+SP G  +  +  S +   I 
Sbjct: 385 --DQTLKLWNLEDGELIDTLSDHAGAVTSVVFSPDGQRLI-SGSSDKTIKIW 433



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 80/216 (37%), Gaps = 21/216 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            P+ Q +A  T ++     + L D + ++    +      +L+  F+ + +    S   D
Sbjct: 161 HPDGQIIATNTINN----TIQLWDIQTEQKHLILKGHSQPVLSIAFNPHAQTLA-SGSAD 215

Query: 280 EAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGS 336
             + ++  D ++   +R L    +  ++ ++SPD   +       G     V    +N  
Sbjct: 216 HTIKLW--DTRTGQQKRSLKGYFYYFLAVAFSPDGLTLA-----SGSADCTVKLWDANTL 268

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
            QKRI +          +SP G ++A     G    +  ++     + + +      + A
Sbjct: 269 AQKRIFKGHGDKIHTVAFSPDGQILASGSRDG-MIKLWDVRSSVRNDTITLNGHQRGIYA 327

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             +SP G+ L        D   K++ +       TL
Sbjct: 328 VIFSPDGQWLA---SGSADWTIKVWDMRTGQERYTL 360


>gi|182438109|ref|YP_001825828.1| putative protease [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178466625|dbj|BAG21145.1| putative protease [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 1131

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 72/200 (36%), Gaps = 30/200 (15%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+   R+ +  PRFS +G     +  +    +I+   +      RLT+    +     +S
Sbjct: 43  RLTVDRTRVSHPRFSPDGSSIAYTTWRTLDPEIHLAPVDGGPARRLTHWGSTDARVCGWS 102

Query: 311 PDSSQ----IVFESDREGKEQL---YVMQSNGSDQKRISQ-----------DKEASYFDP 352
           PD  +    +   S  +        Y + ++G    R+             D E      
Sbjct: 103 PDPGEACQILAVSSHNQPFSYFSWAYSVPTDGGPGGRLPWGPVSDIAVADIDGERRTLLL 162

Query: 353 VWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKK 410
             +P  +  A+ ++ G     + +       ERLL + D +L  P +   GR + F    
Sbjct: 163 TGTPPHEPAAWKRYRGGAMGRLWLH-----GERLLPDLDGHLANPMFV--GRRIAFLSDH 215

Query: 411 DGDTGSKLYSIDLNGRNETL 430
           +G     LYS  ++G +   
Sbjct: 216 EG--VGNLYSCLMDGTDLRR 233



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 53/175 (30%), Gaps = 37/175 (21%)

Query: 281 AMDIYSVDLQS-----NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             D++   L +         RLT          +SPD S I + + R    ++++   +G
Sbjct: 23  EDDLWVAPLAAAGHRPGRAWRLTVDRTRVSHPRFSPDGSSIAYTTWRTLDPEIHLAPVDG 82

Query: 336 SDQKRISQDKEASYFDPVWSPQ---GDLIAFTKFSGEKFAI----GVMKKDGSQERLLVE 388
              +R++           WSP       I       + F+       +  DG     L  
Sbjct: 83  GPARRLTHWGSTDARVCGWSPDPGEACQILAVSSHNQPFSYFSWAYSVPTDGGPGGRLP- 141

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QW 442
                   W P                S +   D++G   TL+ T     +P  W
Sbjct: 142 --------WGP---------------VSDIAVADIDGERRTLLLTGTPPHEPAAW 173



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 86/260 (33%), Gaps = 18/260 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAP 250
             +  RDG   R +  +    +  P    +  +VAY T  D    +   YL     DR P
Sbjct: 319 YWLTHRDG-PARTIADTPGVRVRLPEMLGSGGRVAYVTDADGPDAVEIAYLPRASGDRPP 377

Query: 251 KRIGNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           +R+   +   +    S  +G+R  I+        +  +D      E       +    S 
Sbjct: 378 RRLATGQLGRVQEMISDPDGERLAIASNDG---RLLLLDTAEPGAEAAEPAETVEKPPSG 434

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---- 365
           S  +                V +  G     + +       D  +SP GD + ++     
Sbjct: 435 STRADLHAATGAATPDSAAPVDEHPG--LTELIRSVNGPVRDLAFSPDGDWLTWSHPGVG 492

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            S  +  +  +   G+   + V +   +   P ++  GR L F   +  D    +++ DL
Sbjct: 493 RSLRQIKLARISGPGAPVIVDVTNGRFEDENPVFTEDGRYLAFLSWRGFDPVYDVHTGDL 552

Query: 424 N---GRNETLINTPAYASDP 440
           +   G    L+   +    P
Sbjct: 553 SFPLGCRPYLVPLSSATPSP 572



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 59/186 (31%), Gaps = 19/186 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ----QKVAYATYDDEDILRVYLMDTRID 247
            + +   DG   R LT           +SP+     Q +A ++++       +      D
Sbjct: 74  EIHLAPVDGGPARRLTHWGSTDARVCGWSPDPGEACQILAVSSHNQPFSYFSWAYSVPTD 133

Query: 248 RAP-KRIGNFRSMILAPRFSSNG--KRALISVQKDEAMDIYSVDLQSN-------ATERL 297
             P  R+       +A     +G  +  L++         +                  L
Sbjct: 134 GGPGGRLPWGPVSDIAVA-DIDGERRTLLLTGTPPHEPAAWKRYRGGAMGRLWLHGERLL 192

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            +      +  +     +I F SD EG   LY    +G+D +R   D +A Y     S  
Sbjct: 193 PDLDGHLANPMFV--GRRIAFLSDHEGVGNLYSCLMDGTDLRR-HTDHDAFYARNAAS-D 248

Query: 358 GDLIAF 363
           G  + +
Sbjct: 249 GHRVVY 254



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 33/121 (27%), Gaps = 9/121 (7%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERL---TNTLF 302
              + I +    +    FS +G     S          I    +       +   TN  F
Sbjct: 460 GLTELIRSVNGPVRDLAFSPDGDWLTWSHPGVGRSLRQIKLARISGPGAPVIVDVTNGRF 519

Query: 303 INISASYSPDSSQIVFESDREGKEQLYV----MQSNGSDQKRISQDKEASYFDPVWSPQG 358
            + +  ++ D   + F S R       V    +      +  +     A+      SP G
Sbjct: 520 EDENPVFTEDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSPFALSPDG 579

Query: 359 D 359
            
Sbjct: 580 R 580


>gi|320010289|gb|ADW05139.1| peptidase S41 [Streptomyces flavogriseus ATCC 33331]
          Length = 1171

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 62/227 (27%), Gaps = 63/227 (27%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+   R+ +  PRFS +G R   +  +    +I+ V +      RLT+    +     +S
Sbjct: 43  RLTVDRTRVGHPRFSPDGSRIAYTTWRTLDPEIHLVPVDGGPARRLTHWGSTDARVCGWS 102

Query: 311 PDSS------------------QIVFESDREGKEQ----------LYVMQSNGSDQKRIS 342
           PD                       +    +G             + V   +G  +  + 
Sbjct: 103 PDPGDSSQILAVSSHNQPFSYFSWAYSVPTDGSPGGKLPWGPVSDIAVADVDGERRTLLL 162

Query: 343 QDKE-----------ASYFDPVW------SPQ-----------GDLIAFTKFSGEKFAIG 374
             K                  +W       P            G  IAF         + 
Sbjct: 163 TGKPPHEPAAWKRYRGGAMGRLWLHGERLLPDIGGHLDAPMFVGRRIAFLSDHEGVGNLY 222

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               DGS  R   +     A   S  GR +++        G  L+ +
Sbjct: 223 SCLMDGSDLRRHTDHDAFYARHASSDGRRVVY------QCGGDLWLV 263



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 53/151 (35%), Gaps = 35/151 (23%)

Query: 326 EQLYVMQSNGSDQK-----RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           + L+V     + Q+     R++ D+      P +SP G  IA+T +      I ++  DG
Sbjct: 24  DDLWVAPLAPAGQRPGRAWRLTVDR-TRVGHPRFSPDGSRIAYTTWRTLDPEIHLVPVDG 82

Query: 381 SQERLLVEDSNLQAPT--WSPS---GRSL---------------IFSRKKDGDTG----- 415
              R L    +  A    WSP       +                +S   DG  G     
Sbjct: 83  GPARRLTHWGSTDARVCGWSPDPGDSSQILAVSSHNQPFSYFSWAYSVPTDGSPGGKLPW 142

Query: 416 ---SKLYSIDLNGRNETLINTPAYASDP-QW 442
              S +   D++G   TL+ T     +P  W
Sbjct: 143 GPVSDIAVADVDGERRTLLLTGKPPHEPAAW 173



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 44/118 (37%), Gaps = 9/118 (7%)

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLVED 389
            + G     + +       D  +SP G  + ++     +    I + +  G    ++V+ 
Sbjct: 493 PAPGDGLTELIRSVNGPVRDLAFSPDGHWLTWSHPGVGRSLRQIKLARITGPGAPVIVDV 552

Query: 390 SN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
           +N     + P ++  GR L F   +  D    +++ DL+   G    L+   +    P
Sbjct: 553 TNGRFEDENPVFTGDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSP 610



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 25/82 (30%), Gaps = 5/82 (6%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERL---TNTL 301
           D   + I +    +    FS +G     S          I    +       +   TN  
Sbjct: 497 DGLTELIRSVNGPVRDLAFSPDGHWLTWSHPGVGRSLRQIKLARITGPGAPVIVDVTNGR 556

Query: 302 FINISASYSPDSSQIVFESDRE 323
           F + +  ++ D   + F S R 
Sbjct: 557 FEDENPVFTGDGRYLAFLSWRG 578



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 79/212 (37%), Gaps = 29/212 (13%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF-SPNQQKVAYA----- 229
           RI F+S+    G     L     DG+++R      D   F  R  S + ++V Y      
Sbjct: 208 RIAFLSDHEGVGN----LYSCLMDGSDLR---RHTDHDAFYARHASSDGRRVVYQCGGDL 260

Query: 230 -----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEAM 282
                    + + R   +     R  +R     +       S +  G+ + +SV+     
Sbjct: 261 WLVEDLESPDAVPRKLEVRLGGPRTGRRTYQVPASSHVDSLSVDETGRASAVSVRGS--- 317

Query: 283 DIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQL---YVMQSNG-SD 337
            +Y +  +      + +T  + +        S ++ + +D EG + +   Y+ +++G   
Sbjct: 318 -LYWLTHRDGPARTIADTPGVRVRLPEMLGSSGRVAYVTDAEGDDAVEIAYLPRASGDRP 376

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +R++  +     + V  P+G+ +A     G 
Sbjct: 377 PRRLAAGRLGRVHEIVSDPEGERLAIASNDGR 408


>gi|273068485|gb|ACZ97555.1| Tup12 protein [Schizosaccharomyces octosporus]
          Length = 555

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 95/271 (35%), Gaps = 26/271 (9%)

Query: 164 QSITGEKGDFNSRILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           +     +GD   R +  S       +G+    + + D     +  L    +Q ++   FS
Sbjct: 295 EESAEREGDLYVRSVAFSPDGKFLATGVEDRQIRIWDIAQKRVYRLLTGHEQEIYSLDFS 354

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + + +   + D      + L D       K I +    +    FS + +  + +   D+
Sbjct: 355 KDGKTLISGSGDR----TICLWDVEAGEQ-KLILHTDDGVTTVAFSPDNQFIV-AGSLDK 408

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS------- 333
            + +++        E+L        S  +SPD S +V  S  +   +L+ +Q+       
Sbjct: 409 VIRVWT--ASGTLVEQLVGHQESVYSICFSPDGSHLVSGSL-DNTIRLWELQATRRIPPS 465

Query: 334 ---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
               G   K+I    +        SP G  I  +           +    SQ  L   ++
Sbjct: 466 SIKEGGICKQIFSGHKDFILSVAMSPDGRWII-SGSKDRTIQFWSLDSSTSQLTLQGHNN 524

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           ++ +   SP+G +        GD  ++++S 
Sbjct: 525 SVISVAISPNGHTFA---TGSGDLRARIWSY 552



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 45/150 (30%), Gaps = 18/150 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-------SYSPDSSQI 316
           RFS++GK                  +++     L                 ++SPD    
Sbjct: 263 RFSADGKYLA----TGCNRAAMVFSVETGQLVNLLQEESAEREGDLYVRSVAFSPDGK-- 316

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            F +      Q+ +         R+    E   +   +S  G  +           I + 
Sbjct: 317 -FLATGVEDRQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLI---SGSGDRTICLW 372

Query: 377 KKDGSQER-LLVEDSNLQAPTWSPSGRSLI 405
             +  +++ +L  D  +    +SP  + ++
Sbjct: 373 DVEAGEQKLILHTDDGVTTVAFSPDNQFIV 402


>gi|284051244|ref|ZP_06381454.1| WD-40 repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 1390

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 94/246 (38%), Gaps = 23/246 (9%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VS    +++ +  RDG  ++ L    D++    RFSP+ Q +A           + L + 
Sbjct: 1144 VSASDDHTVKLWSRDGKLLQTLIGHTDKVKAV-RFSPDSQMIA----SAGSDRTIILWNL 1198

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +     + I    + +    FS +G+    +  + +       + Q      +++T   +
Sbjct: 1199 Q-GEIIRTIRFRHTALTWINFSPDGEILAAAANQGDVQFF---NQQGRRLMSISHTKKRD 1254

Query: 305  ---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S ++SP+   I   S  +G  +L+  Q    +  R  Q  E   F   +S  G  +
Sbjct: 1255 SVIYSVNFSPNGQFIA-TSGTDGTVKLWTRQ---GELLRTLQVDENIVFCVSFSADGRSL 1310

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A   +      + V   +G   +      + +    +SP GR+L  S     D   KL++
Sbjct: 1311 ATAGYDKT---VKVWSWEGELLKTFRGHGDKVTRVRFSPDGRTLASSSY---DKTVKLWN 1364

Query: 421  IDLNGR 426
            +  N R
Sbjct: 1365 LHSNPR 1370



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 80/224 (35%), Gaps = 16/224 (7%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S+ + S     ++ + +  G  IR +   R   L    FSP+ + +A     ++  ++ +
Sbjct: 1181 SQMIASAGSDRTIILWNLQGEIIRTI-RFRHTALTWINFSPDGEILA--AAANQGDVQFF 1237

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                R   +        S+I +  FS NG+    S   D  + +++   Q      L   
Sbjct: 1238 NQQGRRLMSISHTKKRDSVIYSVNFSPNGQFIATSGT-DGTVKLWT--RQGELLRTLQVD 1294

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              I    S+S D   +       G ++   + S   +  +  +          +SP G  
Sbjct: 1295 ENIVFCVSFSADGRSLA----TAGYDKTVKVWSWEGELLKTFRGHGDKVTRVRFSPDGRT 1350

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGR 402
            +A + +        +     S  R  ++  N +    T+SP G+
Sbjct: 1351 LASSSYDKTVKLWNLH----SNPRATLKAHNDRVLDVTFSPDGQ 1390



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 90/227 (39%), Gaps = 26/227 (11%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G + +        I+++  +SP+   +A A+ D  + +R++   T   +A   +      
Sbjct: 1076 GIHEQNRLEGHADIVWDVVYSPSGDILASASTD--NTIRLW---TPEGKAIATLTGHNHN 1130

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + +  FS  G+  + S   D  + ++S D      + L        +  +SPDS  I   
Sbjct: 1131 VTSLDFSHCGQMLV-SASDDHTVKLWSRD--GKLLQTLIGHTDKVKAVRFSPDSQMIASA 1187

Query: 320  -SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI----- 373
             SDR     + +    G   + I   +  +     +SP G+++A     G+         
Sbjct: 1188 GSDRT----IILWNLQGEIIRTIRF-RHTALTWINFSPDGEILAAAANQGDVQFFNQQGR 1242

Query: 374  GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +M    +++R    DS + +  +SP+G+ +        D   KL++
Sbjct: 1243 RLMSISHTKKR----DSVIYSVNFSPNGQFIA---TSGTDGTVKLWT 1282


>gi|325962981|ref|YP_004240887.1| Tol biopolymer transporter, periplasmic component-related protein
           [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469068|gb|ADX72753.1| Tol biopolymer transport system, periplasmic component-related
           protein [Arthrobacter phenanthrenivorans Sphe3]
          Length = 1174

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 67/194 (34%), Gaps = 23/194 (11%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G       + D    ++   L      R++       +  ++PD  ++V+   +    ++
Sbjct: 14  GDLVTFVAEDD----VWIAPLGGGRAWRVSALQLPARNPRFTPDGKRLVWTVVQGTAPEV 69

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI---AFTKFSGEKFAIGVMKKDGSQERL 385
              + +G   ++++    ++     ++  G ++   AF +          +  +G     
Sbjct: 70  VSAEVDGGGYRQLTYFGHSTTRVKGFTANGSVVVTSAFRQAESRHTHAYSVPLEGGWAEE 129

Query: 386 LVEDSNLQAPTWSP---SGRSLI-----------FSRKKDGDTGSKLYSIDLNGRNETLI 431
           L     +++  + P     R ++           + R + G  G      D NG  E L+
Sbjct: 130 LPFGP-VESVAFGPEVGDERPVVVGSVLSREPAWWKRYRGGTAGKLWIDTDGNGEFERLL 188

Query: 432 NT-PAYASDPQWVG 444
                  +DP WVG
Sbjct: 189 PDVDGNLADPMWVG 202



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 97/287 (33%), Gaps = 33/287 (11%)

Query: 173 FNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           F+S   F       V+ + ++ + +    G    +   +       PRF+P+ +++ +  
Sbjct: 3   FSSYFRFPHLHGDLVTFVAEDDVWIAPLGGGRA-WRVSALQLPARNPRFTPDGKRLVWTV 61

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSV 287
                   V   +       +      S      F++NG   + S  +         YSV
Sbjct: 62  V-QGTAPEVVSAEVDGGGYRQLTYFGHSTTRVKGFTANGSVVVTSAFRQAESRHTHAYSV 120

Query: 288 DLQSNATERLTNTLFINISASYSP---DSSQIVFES-----------DREGKEQLYVMQS 333
            L+    E L      ++  ++ P   D   +V  S            R G      + +
Sbjct: 121 PLEGGWAEELPFGPVESV--AFGPEVGDERPVVVGSVLSREPAWWKRYRGGTAGKLWIDT 178

Query: 334 NG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +G  + +R+  D + +  DP+W   G  IAF         +  +  +G   R   +  + 
Sbjct: 179 DGNGEFERLLPDVDGNLADPMWV--GGRIAFLSDHEGYGNLYSVLPNGKDLRRHTDHEDF 236

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYAS 438
                +  G  +IF      ++  +L+ + DL      L  T   AS
Sbjct: 237 YVRHAATDGTRVIF------ESAGELWVLHDLGSDAVRLDITLGSAS 277



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 9/109 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---V 276
           SP+ Q++A  T        VY+ DTR              +    +S++ +  + S    
Sbjct: 468 SPDGQRIAVGT----SFGEVYIADTRTGELALVASIGEGTVADLAWSADSRWLVWSEPVT 523

Query: 277 QKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDRE 323
                  +   ++ +     +  T+  F + S +++PD   + F S+R 
Sbjct: 524 SFGSRSRLRLANVATPDAAPVDVTDGRFCDQSPAFTPDGKFLAFLSNRS 572



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 45/121 (37%), Gaps = 9/121 (7%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---TKF 366
           SPD  +I   +      ++Y+  +   +   ++   E +  D  WS     + +      
Sbjct: 468 SPDGQRIAVGTSFG---EVYIADTRTGELALVASIGEGTVADLAWSADSRWLVWSEPVTS 524

Query: 367 SGEKFAIGVMK---KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            G +  + +      D +   +       Q+P ++P G+ L F   +  D     +S DL
Sbjct: 525 FGSRSRLRLANVATPDAAPVDVTDGRFCDQSPAFTPDGKFLAFLSNRSFDPVYDGHSFDL 584

Query: 424 N 424
           +
Sbjct: 585 S 585



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 7/110 (6%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY----ATYDDEDILRVYLM 242
           G     + + D     +  +    +  + +  +S + + + +     ++     LR+  +
Sbjct: 477 GTSFGEVYIADTRTGELALVASIGEGTVADLAWSADSRWLVWSEPVTSFGSRSRLRLANV 536

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQ 290
            T  D AP  + + R    +P F+ +GK       +  D   D +S DL 
Sbjct: 537 AT-PDAAPVDVTDGRFCDQSPAFTPDGKFLAFLSNRSFDPVYDGHSFDLS 585



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 41/121 (33%), Gaps = 19/121 (15%)

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTW 397
           RI     +       SP G  IA     G    + +      +  L+    +  +    W
Sbjct: 453 RIDFPGTSRASALETSPDGQRIAVGTSFG---EVYIADTRTGELALVASIGEGTVADLAW 509

Query: 398 SPSGRSLIFS---RKKDGDTGSKLYSID---------LNGRNETLINTPAYASDPQWVGF 445
           S   R L++S         +  +L ++           +GR      +PA+  D +++ F
Sbjct: 510 SADSRWLVWSEPVTSFGSRSRLRLANVATPDAAPVDVTDGRF--CDQSPAFTPDGKFLAF 567

Query: 446 M 446
           +
Sbjct: 568 L 568


>gi|294816912|ref|ZP_06775554.1| G-protein beta WD-40 repeats containing protein, putative
           [Streptomyces clavuligerus ATCC 27064]
 gi|294321727|gb|EFG03862.1| G-protein beta WD-40 repeats containing protein, putative
           [Streptomyces clavuligerus ATCC 27064]
          Length = 921

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 78/230 (33%), Gaps = 30/230 (13%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P R +      +SP+   +A          RV L D    +        R  + A  +S 
Sbjct: 259 PKRSEAASVLSYSPDGTTLA-----GNIGPRVLLRDALSGKLRATFTGHRKDVTALAYSP 313

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G         D    I   D++S +   L        + +++PD + +   S ++G  +
Sbjct: 314 DGHVLA---TGDTQGVIRLWDIRSGSARTLAGHSNAIHTVTFAPDGTTLA-SSAKDGTVR 369

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQGDLIAFTKFSGEKF 371
           L+   +     + +++  +                       +SP G+ +A         
Sbjct: 370 LW--NTTTGSHRMLTRKAQGIDQTAEPEYDGHRLPLHTSLIGFSPDGETLA-VSQRDGTV 426

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +  +     +  L+     ++   +SP G++L      D DT  +L+ +
Sbjct: 427 GLWAIATRTLRRVLVGHRGQVRRVHFSPDGKTLA--TTDDQDTTIRLWDL 474



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 81/234 (34%), Gaps = 32/234 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A +  D      V L         + +   R  +    FS +GK    +  +
Sbjct: 410 FSPDGETLAVSQRDG----TVGLWAIATRTLRRVLVGHRGQVRRVHFSPDGKTLATTDDQ 465

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + ++ +  +      LT    +  + ++S DSS +V   DR G   +    S+   +
Sbjct: 466 DTTIRLWDL-AKGAVHTTLTAYFDLISALAFSKDSSVLV-TVDRLG---IRQWASSHPVR 520

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE----------KFAIGVMKKDGSQERLLVE 388
           + +            ++  G  +A    +            K  + +      + RL + 
Sbjct: 521 RTLRSGHATGIVSMDFAQDGRTLATAFGTEGPRDPFLRLLSKHTLHIWNLPSHRRRLTIN 580

Query: 389 DSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNETLINTPAYASD 439
           D  + AP   SP G ++  S            S+DL       T +  PA   D
Sbjct: 581 D--VMAPFDLSPDGMAIATSSSDG--------SVDLRETRTGRTRLTIPAEVRD 624



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 76/241 (31%), Gaps = 27/241 (11%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           PS    +    FSP+   +A A  D     R  L++T   +  + I      + +  FS 
Sbjct: 626 PSDQPFVQALAFSPDGTILAIAGSD-----RTMLLNTHTGKPLRTINTRNVAVSSLAFSP 680

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +G   ++     +  ++   D+ +      L      +     S D           G  
Sbjct: 681 DGASLVV--MNSDGAEVQLRDVATGKLRGTLGTGQHDSDRLPLSSDGLLAA----GAGSG 734

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +  +    + R     + +     +SP G  +A    +G +  +     +    R  
Sbjct: 735 SVRLWNTTTFKEHRTITSLDGTVSSVAFSPDGRTLATAGTTGSRIRLW--DTETGTLRQT 792

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKD------GDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + DS+ +  +       L FS           D   + ++ DL  +   +        DP
Sbjct: 793 LSDSSKRFLS-------LAFSSDTPTLAVGISDGTVQFWNTDLPDKRTAVTRLCQAIYDP 845

Query: 441 Q 441
            
Sbjct: 846 S 846



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 57/148 (38%), Gaps = 9/148 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYD----DEDILRVYLMDTRI 246
           SL VM+ DGA ++    +  ++         +  ++  ++            V L +T  
Sbjct: 684 SLVVMNSDGAEVQLRDVATGKLRGTLGTGQHDSDRLPLSSDGLLAAGAGSGSVRLWNTTT 743

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINI 305
            +  + I +    + +  FS +G+    +      + ++  D ++    + L+++    +
Sbjct: 744 FKEHRTITSLDGTVSSVAFSPDGRTLATAGTTGSRIRLW--DTETGTLRQTLSDSSKRFL 801

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQS 333
           S ++S D+  +      +G  Q +    
Sbjct: 802 SLAFSSDTPTLA-VGISDGTVQFWNTDL 828


>gi|253699111|ref|YP_003020300.1| hypothetical protein GM21_0462 [Geobacter sp. M21]
 gi|251773961|gb|ACT16542.1| Tetratricopeptide TPR_2 repeat protein [Geobacter sp. M21]
          Length = 2741

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 55/287 (19%), Positives = 108/287 (37%), Gaps = 32/287 (11%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCV-MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
              SR   +  +V  G     L +    +   +  L       +  P F+     +AYA 
Sbjct: 63  AAKSRDGRLVATVEKGDAGYELWLHAPANPEALPRLLRQSPMRISAPAFNAAATLLAYAD 122

Query: 231 YDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSV 287
             D+    ++L+D  R D  P+R+    +   AP F ++G   L   Q   +   +I  +
Sbjct: 123 ERDDLKGDIWLVDLARPDAEPRRVTGNDAGEDAPAFLADGSALLYQRQLPGSERREIVRL 182

Query: 288 DLQSNATERLTNTLFINIS-ASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDK 345
           +L +   + L   + I+ + A+ SPD  ++ F S +++    L++         +++   
Sbjct: 183 ELPAGGAKAL--PIGIDAAFAAPSPDGGRLAFVSREKDAGGDLWLYDR--GSLTQLTSGP 238

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAP-TW------ 397
           E   + P W    D I FT+F+          + G+  RL L        P ++      
Sbjct: 239 ERDLY-PTW-QDSDTILFTRFAPPSGDSATGPEGGAIFRLKLSRKGGDGLPASFPLTSGL 296

Query: 398 --------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                   +P    ++F   + G  G ++ S+ L+G      +    
Sbjct: 297 LSTAAPLAAPD--RVLFVAGEMG--GGQVLSLPLSGELPDRPDLAGQ 339



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 72/186 (38%), Gaps = 14/186 (7%)

Query: 266 SSNGKRALISVQKDEAMDIYS-VDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDRE 323
           S +G+      + D   +++        A  RL     + IS  +++  ++ + +  +R+
Sbjct: 66  SRDGRLVATVEKGDAGYELWLHAPANPEALPRLLRQSPMRISAPAFNAAATLLAYADERD 125

Query: 324 G-KEQLYVMQSN--GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMK 377
             K  ++++      ++ +R++   +A    P +   G  + + +          + +  
Sbjct: 126 DLKGDIWLVDLARPDAEPRRVT-GNDAGEDAPAFLADGSALLYQRQLPGSERREIVRLEL 184

Query: 378 KDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             G  + L +  D+   AP  SP G  L F   ++ D G  L+  D  G    L + P  
Sbjct: 185 PAGGAKALPIGIDAAFAAP--SPDGGRLAFVS-REKDAGGDLWLYDR-GSLTQLTSGPER 240

Query: 437 ASDPQW 442
              P W
Sbjct: 241 DLYPTW 246


>gi|212633674|ref|YP_002310199.1| peptidase S9, prolyl oligopeptidase active site region [Shewanella
           piezotolerans WP3]
 gi|212555158|gb|ACJ27612.1| Peptidase S9, prolyl oligopeptidase active site region [Shewanella
           piezotolerans WP3]
          Length = 827

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 92/226 (40%), Gaps = 13/226 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++  +A    ++           +  R  +RI ++     A ++S +G +  + ++  + 
Sbjct: 338 DEDVLASVKAENAKAKGESYNSEKSPRKIQRIQDWGWSQSAMQWSESGDKLAVMLEAVDN 397

Query: 282 MDIY--SVDLQSNATE---RLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQS 333
            D +  +VDL     +   RL +  +IN + +   + P+S  + + S+  G   +Y +++
Sbjct: 398 KDRWIATVDLTKGNLKTEHRLHDDAWINYNFNQYGWLPNSDSLYYLSEETGYSHIY-LKA 456

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            G   + ++Q  +    D    P+   I +   K       +  ++    ++  L +   
Sbjct: 457 KGEKARALTQ-GQYVVSDITLGPKAQFIYYKANKSHPGIDNVYRVEIATGKDEQLTQWQG 515

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               + SP G+ L+ +        ++L+   LNG  + L +  + A
Sbjct: 516 QLDYSLSPDGKQLLLNASTR-TRPAELFVQPLNGEMKQLTDYTSDA 560



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 84/234 (35%), Gaps = 18/234 (7%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L  VK        + ++S  S RKI   I D  +     +  +   ++  + E+V +   
Sbjct: 342 LASVKAENAKAKGESYNSEKSPRKI-QRIQDWGWSQSAMQWSESGDKLAVMLEAVDNKDR 400

Query: 190 KNSLCVMDRDGANIRYLTPSRDQI-----LFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
              +  +D    N++      D         +  + PN   + Y + +       ++   
Sbjct: 401 W--IATVDLTKGNLKTEHRLHDDAWINYNFNQYGWLPNSDSLYYLSEETG---YSHIYLK 455

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLF 302
                 + +   + ++         +       K      ++Y V++ +   E+LT    
Sbjct: 456 AKGEKARALTQGQYVVSDITLGPKAQFIYYKANKSHPGIDNVYRVEIATGKDEQLTQWQG 515

Query: 303 -INISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            ++ S   SPD  Q++   S R    +L+V   NG + K+++     ++ +  W
Sbjct: 516 QLDYS--LSPDGKQLLLNASTRTRPAELFVQPLNG-EMKQLTDYTSDAFKNYAW 566


>gi|325928280|ref|ZP_08189483.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas perforans 91-118]
 gi|325541370|gb|EGD12909.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas perforans 91-118]
          Length = 263

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 73/214 (34%), Gaps = 25/214 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATE--RL--TNTLFINI 305
           + +  +       S +G+R + +  +       D++   L+    +  +L   NT     
Sbjct: 3   VVSTPANEARATLSPDGQRIVWASDRAGGTGGWDLWQAQLRGGRWQDAQLLPINTAQDET 62

Query: 306 SASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSP 356
           +  +S D   ++F S R    G   LY    +        Q      +   +   P  S 
Sbjct: 63  TPLFSADGRWLLFASTRPGGAGGSDLYRAPVDTQGAVGPVQSLGAAINSAGNERAPTLSL 122

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT------WSPSGRSLIFS 407
            G  + F            + V + DG      V   ++ +        W  +GR+L+++
Sbjct: 123 DGTRLLFASDGHGGAGGMDLFVARWDGQAFTTPVALVDINSAADELDAAWLGNGRALVWA 182

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R K       L +I  +GR    +  P   + PQ
Sbjct: 183 RGKTDGPSQLLLAICKDGRFAQGLPLPLSFNGPQ 216



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGS---DQKRISQDKEASYFDP 352
           +T      A+ SPD  +IV+ SDR    G   L+  Q  G    D + +  +       P
Sbjct: 5   STPANEARATLSPDGQRIVWASDRAGGTGGWDLWQAQLRGGRWQDAQLLPINTAQDETTP 64

Query: 353 VWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLVED--------SNLQAPTWSPSG 401
           ++S  G  + F            +     D       V+          N +APT S  G
Sbjct: 65  LFSADGRWLLFASTRPGGAGGSDLYRAPVDTQGAVGPVQSLGAAINSAGNERAPTLSLDG 124

Query: 402 RSLIFSRK-KDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
             L+F+     G  G  L+    +G+  T       IN+ A   D  W+G
Sbjct: 125 TRLLFASDGHGGAGGMDLFVARWDGQAFTTPVALVDINSAADELDAAWLG 174



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 49/165 (29%), Gaps = 19/165 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--- 234
           +     G     L      G    + + L  +  Q    P FS + + + +A+       
Sbjct: 25  ASDRAGGTGGWDLWQAQLRGGRWQDAQLLPINTAQDETTPLFSADGRWLLFASTRPGGAG 84

Query: 235 --DILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEAM---DIYS 286
             D+ R  +         + +G   N      AP  S +G R L +          D++ 
Sbjct: 85  GSDLYRAPVDTQGAVGPVQSLGAAINSAGNERAPTLSLDGTRLLFASDGHGGAGGMDLFV 144

Query: 287 VDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREGKE 326
                 A          N+    + A++  +   +V+   +    
Sbjct: 145 ARWDGQAFTTPVALVDINSAADELDAAWLGNGRALVWARGKTDGP 189


>gi|186686488|ref|YP_001869684.1| protein kinase [Nostoc punctiforme PCC 73102]
 gi|186468940|gb|ACC84741.1| protein kinase [Nostoc punctiforme PCC 73102]
          Length = 612

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 88/266 (33%), Gaps = 25/266 (9%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S++I       K   +  I   S+++ SG   +++ + +           +    +    
Sbjct: 368 SNEILTLTGHSKQINSVAISPDSQTLASGSDDDTIKIWNLKTGEEISTIKANSGTVLSIA 427

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+QQ +   + D     RV L + +     K +      + +   S +G     S   
Sbjct: 428 ISPDQQMIVSGSSDS----RVRLWNLKTGECIKTLATHAYRVSSVAISQDGSTVA-SSSW 482

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSD 337
           D  + I+     +   + +T ++ I +      +S  +V  S DR    ++ V   N  +
Sbjct: 483 DTTIKIWPKSTLTGHLKPVT-SIAIGL------NSQILVSASVDR----RIIVWNLNTGE 531

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAP 395
           +                SP    I           I V      QE   V        A 
Sbjct: 532 KIYTLDGHSDVVNSVAISPDSQKIVSGSDDE---KIKVWNLSNGQEAYTVNGHLDGVNAL 588

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +SP G+ L+       DT  K++ I
Sbjct: 589 VFSPDGQILV---SGGKDTTIKVWRI 611



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 20/225 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                  + +     SP+ Q +   + D+     + + +         +      I +  
Sbjct: 330 SWNSGHSKAVLALAISPDGQTLVSGSEDN----IIKVWNLNNSNEILTLTGHSKQINSVA 385

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDRE 323
            S + +    S   D+ + I+  +L++      +       +S + SPD   IV  S   
Sbjct: 386 ISPDSQTLA-SGSDDDTIKIW--NLKTGEEISTIKANSGTVLSIAISPDQQMIVSGSS-- 440

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              ++ +      +  +              S  G  +A + +      I          
Sbjct: 441 -DSRVRLWNLKTGECIKTLATHAYRVSSVAISQDGSTVASSSWD-TTIKIWPKSTLTGHL 498

Query: 384 RLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           + +       ++    + S   R +++    + +TG K+Y++D +
Sbjct: 499 KPVTSIAIGLNSQILVSASVDRRIIVW----NLNTGEKIYTLDGH 539



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 65/174 (37%), Gaps = 18/174 (10%)

Query: 127 EFRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISD-------DIYQSIT---GEKGDF 173
             RLW++K     K +    +  S  +  +   T++         I+   T     K   
Sbjct: 443 RVRLWNLKTGECIKTLATHAYRVSSVAISQDGSTVASSSWDTTIKIWPKSTLTGHLKPVT 502

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +  I   S+ +VS  +   + V + +     Y       ++     SP+ QK+   + D+
Sbjct: 503 SIAIGLNSQILVSASVDRRIIVWNLNTGEKIYTLDGHSDVVNSVAISPDSQKIVSGSDDE 562

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +    + + +    +    +      + A  FS +G + L+S  KD  + ++ +
Sbjct: 563 K----IKVWNLSNGQEAYTVNGHLDGVNALVFSPDG-QILVSGGKDTTIKVWRI 611


>gi|269925414|ref|YP_003322037.1| hypothetical protein Tter_0293 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789074|gb|ACZ41215.1| hypothetical protein Tter_0293 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 400

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/336 (15%), Positives = 103/336 (30%), Gaps = 48/336 (14%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           F S  A W+      S +++ ++T  +   N R   ++    S      L +++ +    
Sbjct: 72  FQSDKAIWKMDPSRGSAEVFLNLTCRELLLNPRTQDLTCIQPSKSKSTGLLLINLETHKS 131

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDE----------DILRVYLMDTRIDRAPKRI 253
           + +       + +  +S + + +AY    D           D   +Y+ D       +  
Sbjct: 132 KEIVSDN---VIQAAWSQDGRYLAYTVTRDSNHDKKLELYLDRSLIYIKDIVRGSTIRV- 187

Query: 254 GNFRSMILAPRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFIN------- 304
                  + P +     +   +    +     I S  L S A + +     +        
Sbjct: 188 ----GPGIDPAWDPRKPQLFFATLGSRQGN-KIMSYSLASRAFKEVVAIKDLPKDLSQYG 242

Query: 305 ----------ISASYSPDSSQIVFESDREGKEQLYVMQ---SNGSDQKRISQDKEASYFD 351
                        S S D S++   S       L  +     + ++        E+S+  
Sbjct: 243 VPFATKLNLLRHPSISYDGSRLA-ISAYGSTALLITLDLHKPDKNNIHVEDFAPESSFEH 301

Query: 352 PVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFS 407
            VW P    +A+   +      + V+        +   +        P W+P G+ LI +
Sbjct: 302 LVWGPNSHKLAYEVLTPSGLDQLAVLDVSTGNREIFGDIRSGIGYTEPAWAPDGKHLIAT 361

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           R         +Y I L G        P Y S   W+
Sbjct: 362 RTYRNRAKG-IYMITL-GNQRIRTLKPGYYSKSLWI 395


>gi|116620510|ref|YP_822666.1| TPR repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223672|gb|ABJ82381.1| Tetratricopeptide TPR_2 repeat protein [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 756

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/316 (16%), Positives = 96/316 (30%), Gaps = 53/316 (16%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            H+ S D         G  N + L+    V   +      V+    ++ R     + ++ 
Sbjct: 191 CHSFSADGKTMGMDVDGPANDKGLYAMAGVQPKMSIRKEDVIAW--SDYRGKLGGKLRVG 248

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRA 272
           F  + SP  ++V     D       Y              + NF+       F       
Sbjct: 249 FMSQVSPEGRQVVTTINDPGQDQPEYQRRKNPLDLINNYFVANFKEYSFLQVFYPTRGIL 308

Query: 273 LISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFE---------- 319
                          D  +     L    +  +++ +A +SPD   +VF           
Sbjct: 309 AW------------YDRAAGKLRPLPGADDPRYVHTNAVWSPDGKYLVFARAEARDAYTP 356

Query: 320 ----SDREGK-------EQLYVMQSNGSDQKRISQDKEASYFD-----PVWSPQGDLIAF 363
               ++R            LY +  NG           AS+       P  SP G  I +
Sbjct: 357 GAQPAERANGANETPIQYDLYRIPFNGGAGGTAEPIDGASHNGMSNSFPKVSPDGRWIVW 416

Query: 364 TKFSGEKF-----AIGVMKKDGSQERLL-VEDSNLQAP-TWSPSGRSLIFSR-KKDGDTG 415
            +    +       + ++   G + R +      + +  ++SP+ R L+FS   +   T 
Sbjct: 417 VQARNGQLMRPDSQLYIVPAAGGKARRMRANTPLMNSWHSFSPNSRWLVFSSKSRSPYTQ 476

Query: 416 SKLYSIDLNGRNETLI 431
             L  ID +G +   +
Sbjct: 477 MFLTHIDADGNDTPPV 492


>gi|156741722|ref|YP_001431851.1| hypothetical protein Rcas_1741 [Roseiflexus castenholzii DSM 13941]
 gi|156233050|gb|ABU57833.1| hypothetical protein Rcas_1741 [Roseiflexus castenholzii DSM 13941]
          Length = 628

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 64/190 (33%), Gaps = 55/190 (28%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS------------ 313
           S+NG    +  + +   D+++V    +   R+TN   +  S S+SPD+            
Sbjct: 288 SANGNVIAVVREVERQFDVWTVRRDGSDLRRITNDRSVEASLSWSPDNAALIFAAADASE 347

Query: 314 -------SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-- 364
                   + ++ S      Q+ V+      ++ +     A+  DP  SP G  IA++  
Sbjct: 348 FLPQTWPDRALWCS----AGQIVVLDIASGQRQAL-----ANGCDPALSPDGRRIAYSAP 398

Query: 365 -----------------------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                                  +     +     + DG+          + AP WSP G
Sbjct: 399 PTLRDPAIAGGAPVAGNAIRLINRRGENTWNFA--RADGADAPAPNTGMLVYAPAWSPDG 456

Query: 402 RSLIFSRKKD 411
            S+ + R   
Sbjct: 457 ASVAYHRYVG 466



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 52/288 (18%), Positives = 95/288 (32%), Gaps = 73/288 (25%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L + D  G  +           F P  S N   +A    + E    V+ +  R     +R
Sbjct: 267 LWIFDAGGERLIV----DQVREFTP--SANGNVIA-VVREVERQFDVWTVR-RDGSDLRR 318

Query: 253 IGNFRSMILAPRFSSNG-------------------KRALISVQKDEAMDIYSVDLQSNA 293
           I N RS+  +  +S +                     RAL       A  I  +D+ S  
Sbjct: 319 ITNDRSVEASLSWSPDNAALIFAAADASEFLPQTWPDRALWCS----AGQIVVLDIASGQ 374

Query: 294 TERLTNTLFINISASYSPDSSQIVFES-----------------------DREGKEQLYV 330
            + L N        + SPD  +I + +                       +R G+     
Sbjct: 375 RQALANG----CDPALSPDGRRIAYSAPPTLRDPAIAGGAPVAGNAIRLINRRGENTWNF 430

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-----GSQERL 385
            +++G+D    + +     + P WSP G  +A+ ++ G +  + V   +       + R 
Sbjct: 431 ARADGADAP--APNTGMLVYAPAWSPDGASVAYHRYVGMQIEVDVNLSEIGGSFEGKGRP 488

Query: 386 LVEDSNLQAPT-WSPSGRSLIF-------SRKKDGDTGSKLYSIDLNG 425
             E +    P+ ++P GR           +R   G     +  + L+G
Sbjct: 489 FAEGAGWLLPSRFAPDGRRTAIIEHNYSDARGFGGYDDWSVQVVALDG 536



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 86/276 (31%), Gaps = 63/276 (22%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD----- 243
            +  +  + RDG+++R +T  R        +SP+   + +A  D  + L     D     
Sbjct: 302 RQFDVWTVRRDGSDLRRITNDRSVEASL-SWSPDNAALIFAAADASEFLPQTWPDRALWC 360

Query: 244 TRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERL 297
           +        I + +   LA    P  S +G+R   S          +    +  NA  RL
Sbjct: 361 SAGQIVVLDIASGQRQALANGCDPALSPDGRRIAYSAPPTLRDPAIAGGAPVAGNAI-RL 419

Query: 298 TNTLFINI---------------------SASYSPDSSQIVFESDREGKEQLYV------ 330
            N    N                      + ++SPD + + +   R    Q+ V      
Sbjct: 420 INRRGENTWNFARADGADAPAPNTGMLVYAPAWSPDGASVAY--HRYVGMQIEVDVNLSE 477

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---------EKFAIGVMKKDG- 380
           +  +   + R   +         ++P G   A  + +          + +++ V+  DG 
Sbjct: 478 IGGSFEGKGRPFAEGAGWLLPSRFAPDGRRTAIIEHNYSDARGFGGYDDWSVQVVALDGL 537

Query: 381 -------SQERLL----VEDSNLQAPTWSPSGRSLI 405
                      +L           +  WSP G  L 
Sbjct: 538 RTVDLPQGSVTMLGGSATRLPRAASAAWSPDGTLLA 573



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 65/203 (32%), Gaps = 47/203 (23%)

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D A+ I+  D      ERL        +   S + + I    + E +  ++ ++ +GSD
Sbjct: 263 RDGALWIF--DAGG---ERLIVDQVREFTP--SANGNVIAVVREVERQFDVWTVRRDGSD 315

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---------------AIGVMKKDGSQ 382
            +RI+ D+        WSP    + F      +F                I V+     Q
Sbjct: 316 LRRITNDRSVEASL-SWSPDNAALIFAAADASEFLPQTWPDRALWCSAGQIVVLDIASGQ 374

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD----------TGSKLYSID---------- 422
            + L        P  SP GR + +S                 G+ +  I+          
Sbjct: 375 RQALANG---CDPALSPDGRRIAYSAPPTLRDPAIAGGAPVAGNAIRLINRRGENTWNFA 431

Query: 423 -LNGRNETLINTPAYASDPQWVG 444
             +G +    NT      P W  
Sbjct: 432 RADGADAPAPNTGMLVYAPAWSP 454



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 33/181 (18%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            ++        + +   +  +++   +N+      DGA+     P+   +++ P +SP+ 
Sbjct: 399 PTLRDPAIAGGAPVAGNAIRLINRRGENTWNFARADGADA--PAPNTGMLVYAPAWSPDG 456

Query: 224 QKVAYATYDDEDI---LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------ 274
             VAY  Y    I   + +  +    +   +        +L  RF+ +G+R  I      
Sbjct: 457 ASVAYHRYVGMQIEVDVNLSEIGGSFEGKGRPFAEGAGWLLPSRFAPDGRRTAIIEHNYS 516

Query: 275 -----------SVQKDEAMDIYSVDLQ-------SNATERLTNTLFINISASYSPDSSQI 316
                      SVQ      + +VDL          +  RL        SA++SPD + +
Sbjct: 517 DARGFGGYDDWSVQVVALDGLRTVDLPQGSVTMLGGSATRLPRA----ASAAWSPDGTLL 572

Query: 317 V 317
            
Sbjct: 573 A 573


>gi|288800074|ref|ZP_06405533.1| prolyl oligopeptidase family protein [Prevotella sp. oral taxon 299
           str. F0039]
 gi|288333322|gb|EFC71801.1| prolyl oligopeptidase family protein [Prevotella sp. oral taxon 299
           str. F0039]
          Length = 716

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 79/233 (33%), Gaps = 63/233 (27%)

Query: 266 SSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +G + +  V             +Y ++   +  + LT     +   ++  +   I F 
Sbjct: 50  SPDGSKVVYQVSYYNVKENKSTQVLYLINADGSNKKLLTPAGKKDTDPTWIENGKAIAFL 109

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----------------- 362
           S+     QL+ M  +G+++ +++ D +      ++SP    +                  
Sbjct: 110 SE----GQLWKMNVDGTNRVKLTNDSK-DIEGFLFSPSEKQVILIKSIPYHGTIEAKPAD 164

Query: 363 ----------------FTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAP-------- 395
                           +  +  E     +    G   ++ + ++E    + P        
Sbjct: 165 LPLTTGMVINDMNYRHWDHYVQENLHPFLANVTGNTINEGKDILEGEPYECPMAPFGGVE 224

Query: 396 --TWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTPAYASDP 440
              WSP  +++ ++ RKK+G      T S ++   ++ +    +  PA   +P
Sbjct: 225 QLAWSPDSKTIAYTCRKKEGVNYAISTDSDIFLYTISTKQTRNLCKPADYKEP 277



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 40/101 (39%), Gaps = 13/101 (12%)

Query: 347 ASYFDPVWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
                 V SP G  + +       K +     + ++  DGS ++LL         PTW  
Sbjct: 42  GRIGTCVASPDGSKVVYQVSYYNVKENKSTQVLYLINADGSNKKLLTPAGKKDTDPTWIE 101

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           +G+++ F  +       +L+ ++++G N   +   +   + 
Sbjct: 102 NGKAIAFLSE------GQLWKMNVDGTNRVKLTNDSKDIEG 136



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 65/282 (23%), Gaps = 88/282 (31%)

Query: 220 SPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+  KV Y        +    +V  +        K +         P +  NGK     
Sbjct: 50  SPDGSKVVYQVSYYNVKENKSTQVLYLINADGSNKKLLTPAGKKDTDPTWIENGKAIAFL 109

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------------------ 317
            +      ++ +++      +LTN         +SP   Q++                  
Sbjct: 110 SEG----QLWKMNVDGTNRVKLTNDSKDIEGFLFSPSEKQVILIKSIPYHGTIEAKPADL 165

Query: 318 --------------------------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                                     F ++  G            +              
Sbjct: 166 PLTTGMVINDMNYRHWDHYVQENLHPFLANVTGNTINEGKDILEGEPYECPMAPFGGVEQ 225

Query: 352 PVWSPQGDLIAFTKFSGEKFA--------IGVMKKDGSQERLLVEDSNLQAPT------- 396
             WSP    IA+T    E           I +      Q R L + ++ + P        
Sbjct: 226 LAWSPDSKTIAYTCRKKEGVNYAISTDSDIFLYTISTKQTRNLCKPADYKEPVIDASKTM 285

Query: 397 ---------------------WSPSGRSLIFSRKKDGDTGSK 417
                                +S  G+ + +   K+    S 
Sbjct: 286 KTQAVNHQNADYNVGYDINPKFSFDGKYIAWQSMKNNGYESD 327



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 58/187 (31%), Gaps = 29/187 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + +AY     E +   Y + T  D     I   ++  L                
Sbjct: 227 AWSPDSKTIAYTCRKKEGVN--YAISTDSDIFLYTISTKQTRNLC--------------- 269

Query: 278 KDEAMDIYSVDLQSNATERLTNTL------FINISASYSPDSSQIVFES-----DREGKE 326
           K        +D       +  N          +I+  +S D   I ++S         + 
Sbjct: 270 KPADYKEPVIDASKTMKTQAVNHQNADYNVGYDINPKFSFDGKYIAWQSMKNNGYESDRN 329

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +L V +    ++  +++  +++  +  W+     + F         +      G + + L
Sbjct: 330 RLCVYELVTGNKSYVTEKFDSNVDEFCWAKDNKTLYFIGCWHATVQVYQTNLKG-EVKKL 388

Query: 387 VEDSNLQ 393
            +  +  
Sbjct: 389 TDGVHDC 395



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 398 SPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLINTPA-YASDPQWV 443
           SP G  +++        +  +   LY I+ +G N+ L+       +DP W+
Sbjct: 50  SPDGSKVVYQVSYYNVKENKSTQVLYLINADGSNKKLLTPAGKKDTDPTWI 100



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 88/276 (31%), Gaps = 27/276 (9%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-----DGANIRYLTPSRDQILFE 216
           +  +I+ +   F   I       +         V+D        A               
Sbjct: 245 VNYAISTDSDIFLYTISTKQTRNLCKPADYKEPVIDASKTMKTQAVNHQNADYNVGYDIN 304

Query: 217 PRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           P+FS + + +A+ +  +     D  R+ + +            F S +    ++ + K  
Sbjct: 305 PKFSFDGKYIAWQSMKNNGYESDRNRLCVYELVTGNKSYVTEKFDSNVDEFCWAKDNKTL 364

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FESDREGKEQLYV 330
                    + +Y  +L+    ++LT+ +          +  +++  F S     + L+V
Sbjct: 365 YFIGCWHATVQVYQTNLK-GEVKKLTDGVHDCGGIQLLGNQDKLLAKFHS-MSHPDDLFV 422

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +         ++  +       ++S     +A  K         V   DG + ++ V   
Sbjct: 423 LNLKDKKNGYVATTQITDENKHIFS----QLALGKIEDR----WVTTTDGKKMQVWV--- 471

Query: 391 NLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSIDLN 424
            +  P + P+ +   ++F         S+ +S   N
Sbjct: 472 -ILPPHFDPNKKYPTILFCEGGPQSPVSQFWSYRWN 506


>gi|317478651|ref|ZP_07937806.1| hypothetical protein HMPREF1007_00922 [Bacteroides sp. 4_1_36]
 gi|316905162|gb|EFV26961.1| hypothetical protein HMPREF1007_00922 [Bacteroides sp. 4_1_36]
          Length = 478

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 85/269 (31%), Gaps = 58/269 (21%)

Query: 188 IIKNSLCVMDRDGANIR--YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR------- 238
             KN   +M  DG        T S       P + P+ + +AY+  +             
Sbjct: 181 RGKNGGTLMQIDGKREMLDTKTDSTLSAGVYPYWHPSGKYIAYSVNNTRQSFHAVKDERV 240

Query: 239 ----------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                     +Y  +T        +         P FS +G++           +   + 
Sbjct: 241 EVLDLESDVLIYHPETHELLLSPLLQKKEVFETFPVFSPDGRKLYFCT-----AEAKPIP 295

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            +        +   I+ +     D +           E++  + +  + +K IS      
Sbjct: 296 AEYKEIRY--SLCSIDFNPE---DGTF---------GEKIDTLVNAAAMKKSISF----- 336

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAI-------GVMKKDGSQERLLVEDSNLQAPT---WS 398
              P  S  G+ I FT      F+I        ++       R + E ++    +   WS
Sbjct: 337 ---PRPSYDGEYIMFTLSDYGNFSIWHKEADLWLLDLKDGGMRPIKEVNSDDTESFHNWS 393

Query: 399 PSGRSLIFSRKKDGDTGSKLY--SIDLNG 425
            + R  +FS ++     ++LY  S+D NG
Sbjct: 394 SNSRWFVFSSRRGDGLYTRLYLASMDENG 422



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 31/177 (17%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGN 255
           L   ++     P FSP+ +K+ + T + + I   Y            +       ++I  
Sbjct: 264 LLQKKEVFETFPVFSPDGRKLYFCTAEAKPIPAEYKEIRYSLCSIDFNPEDGTFGEKIDT 323

Query: 256 F------RSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLF 302
                  +  I  PR S +G+  + ++             D++ +DL+      +     
Sbjct: 324 LVNAAAMKKSISFPRPSYDGEYIMFTLSDYGNFSIWHKEADLWLLDLKDGGMRPIKEVNS 383

Query: 303 INIS--ASYSPDSSQIVFESDREGK--EQLYV--MQSNG--SDQKRISQDKEASYFD 351
            +     ++S +S   VF S R      +LY+  M  NG       + Q+    Y+D
Sbjct: 384 DDTESFHNWSSNSRWFVFSSRRGDGLYTRLYLASMDENGVVGKPFLLPQENPWEYYD 440


>gi|153871331|ref|ZP_02000530.1| WD-40 repeat protein [Beggiatoa sp. PS]
 gi|152072203|gb|EDN69470.1| WD-40 repeat protein [Beggiatoa sp. PS]
          Length = 888

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/329 (15%), Positives = 105/329 (31%), Gaps = 52/329 (15%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
              L    +LWD++  ++I                         S++G  G   S +   
Sbjct: 69  SGSLDNTLKLWDIETGQEI------------------------NSLSGHTGWIMSVVALK 104

Query: 181 SESVV-SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            ++   S     +L + +       +      + +F    SPN +              +
Sbjct: 105 KDNTFLSASYDKTLKLWNSQTGQEIHTFEGHTRSIFSVALSPNGK----TALSGSGDNTL 160

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L      R  +      ++I +  FS NGK   +S   D+ + ++  ++++    + T 
Sbjct: 161 ILWGLNSKRKLRTFKGHTNVITSVAFSPNGK-MALSGSYDKTLKLW--NIRNRQVMK-TF 216

Query: 300 TLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
               +   S ++SPD    +  S+    + +         +    Q      +   +SP 
Sbjct: 217 EGHTDKIWSVAFSPDGLTCLSGSE---DKTIKRWNLKKGIEINEFQGHTDKVWSVAFSPD 273

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTG 415
           G  I           I +   +  QE    +  N  +++ T+SP G  ++       D  
Sbjct: 274 GKTIVSGSEDNT---IRLWNSETEQEIRTFQGHNGPVRSVTFSPDGHYILSGST---DNT 327

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVG 444
            KL+      R +  I  P +   P    
Sbjct: 328 LKLW------RTQNAIPKPDFIVFPHKGP 350



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 79/228 (34%), Gaps = 18/228 (7%)

Query: 182 ESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++++SG + N+L + D   G  I  L+     I+       +     + +   +  L+  
Sbjct: 65  KTILSGSLDNTLKLWDIETGQEINSLSGHTGWIMSVVALKKDN---TFLSASYDKTLK-- 119

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L +++  +           I +   S NGK   +S   D  + ++ ++ +          
Sbjct: 120 LWNSQTGQEIHTFEGHTRSIFSVALSPNGKT-ALSGSGDNTLILWGLNSK-RKLRTFKGH 177

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             +  S ++SP+    +  S     + L +         +  +      +   +SP G  
Sbjct: 178 TNVITSVAFSPNGKMALSGSY---DKTLKLWNIRNRQVMKTFEGHTDKIWSVAFSPDG-- 232

Query: 361 IAFTKFSGEKFA-IGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
              T  SG +   I         E    +       +  +SP G++++
Sbjct: 233 --LTCLSGSEDKTIKRWNLKKGIEINEFQGHTDKVWSVAFSPDGKTIV 278



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 65/204 (31%), Gaps = 18/204 (8%)

Query: 244 TRIDRAPKRIGNFRSMIL---APRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTN 299
              D   K I  F+       +  F  +GK  L S   D  + ++  D+++      L+ 
Sbjct: 36  VLADTVTKPIRTFQGHTYYVESVAFMPDGKTIL-SGSLDNTLKLW--DIETGQEINSLSG 92

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                +S           F S     + L +  S    +    +    S F    SP G 
Sbjct: 93  HTGWIMS--VVALKKDNTFLS-ASYDKTLKLWNSQTGQEIHTFEGHTRSIFSVALSPNGK 149

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             A +        +  +             + + +  +SP+G+  +       D   KL+
Sbjct: 150 T-ALSGSGDNTLILWGLNSKRKLRTFKGHTNVITSVAFSPNGKMALSGSY---DKTLKLW 205

Query: 420 SIDLNGRNETLINTPAYASDPQWV 443
           +I    RN  ++ T    +D  W 
Sbjct: 206 NI----RNRQVMKTFEGHTDKIWS 225


>gi|126659611|ref|ZP_01730741.1| Peptidase C14, caspase catalytic subunit p20 [Cyanothece sp. CCY0110]
 gi|126619057|gb|EAZ89796.1| Peptidase C14, caspase catalytic subunit p20 [Cyanothece sp. CCY0110]
          Length = 1373

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 73/202 (36%), Gaps = 25/202 (12%)

Query: 220  SPN---QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI---LAPRFSSNGKRAL 273
            SP+    Q +A A  D              +   + + ++R+         FS + K+ L
Sbjct: 861  SPDDENGQMIASAGEDGN--------IKLWNSQGQELASWRADNQRVWMVAFSPD-KQIL 911

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             S  +D  + ++  DLQ      L          ++SPD  +I     ++G   L +   
Sbjct: 912  ASAGEDGTVRLW--DLQGKQLNELKGHKATTRFVTFSPDGQKIASVGGQDG--ILRLWNK 967

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            NG+  +    D         + P   L+     +G    I +   DG   + L  D +  
Sbjct: 968  NGNLLRSWPADNLKFLKSVDFHPNNQLLV---TAGRDEKIKIWTLDGKLLKQL--DFHAW 1022

Query: 394  APTWSPSGRSLIFSRKKDGDTG 415
               +SP G+ L+ +   DG  G
Sbjct: 1023 GAFFSPDGQYLV-AAGDDGTIG 1043



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 104/294 (35%), Gaps = 31/294 (10%)

Query: 132  DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
            D ++ + I       +   W      ++     +       F+     ++ +   G    
Sbjct: 863  DDENGQMIASAGEDGNIKLWNSQGQELASWRADNQRVWMVAFSPDKQILASAGEDG---- 918

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            ++ + D  G  +  L   +    F   FSP+ QK+A           + L +   +    
Sbjct: 919  TVRLWDLQGKQLNELKGHKATTRFV-TFSPDGQKIASV---GGQDGILRLWNKNGNLLRS 974

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
               +    + +  F  N  + L++  +DE + I+++D      ++L    +    A +SP
Sbjct: 975  WPADNLKFLKSVDFHPN-NQLLVTAGRDEKIKIWTLD--GKLLKQLDFHAW---GAFFSP 1028

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            D   +V   D +G   L+   ++  +  +     E   ++  +S     IA     G+  
Sbjct: 1029 DGQYLVAAGD-DGTIGLW---NSKYELVQRWPVDEGEIWNVAFSTDSKKIA---SGGDDG 1081

Query: 372  AIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSI 421
             + V    G    +L +      P     ++ + + ++       D  ++L+++
Sbjct: 1082 NVRVWNLKGD---ILTQFEGHNGPVRSVKFTANSQQVV---SSGDDGTTRLWNV 1129


>gi|78358746|ref|YP_390195.1| hypothetical protein Dde_3707 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78221151|gb|ABB40500.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 425

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 71/190 (37%), Gaps = 22/190 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  V + + +N +  +  DG   + L  +R+   +  R+SP+   +      +  +  V 
Sbjct: 249 SGGVAAPVRQNGMWGVALDG---QMLWKARNAQCWNLRYSPDGSHLWAVVAPEYGMFTVS 305

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L DT        + +          S +G RA      +  +    VD       R T  
Sbjct: 306 LDDTPWTFRAPVVTDM-------VLSPSGDRAAALASDNNTLWQVVVD---GKPWRGTYD 355

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +       +SPD +++    +R GK   YV+  +G+       +   + FDPV+SP G  
Sbjct: 356 MAWQ--PVFSPDGTRVAARVERNGK---YVVLLDGAPAA----EAFDTAFDPVFSPDGRK 406

Query: 361 IAFTKFSGEK 370
           +        K
Sbjct: 407 LLLRGVRNGK 416



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 71/234 (30%), Gaps = 50/234 (21%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-----FRSMILAP----- 263
            + P FS + ++VA     +     + +  T      + +           + AP     
Sbjct: 201 CWTPVFSADGRRVAVQVRRNLHDYTIAVDGTPWTINYQCVWEPCFHPSSGGVAAPVRQNG 260

Query: 264 ----------------------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                                 R+S +G      V  +  M   S+D         T   
Sbjct: 261 MWGVALDGQMLWKARNAQCWNLRYSPDGSHLWAVVAPEYGMFTVSLDD-----TPWTFRA 315

Query: 302 FINISASYSPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +      SP   +     SD      L+ +  +G   +          + PV+SP G  
Sbjct: 316 PVVTDMVLSPSGDRAAALASD---NNTLWQVVVDGKPWR----GTYDMAWQPVFSPDGTR 368

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           +A       K+   V+  DG+      + +    P +SP GR L+    ++G  
Sbjct: 369 VAARVERNGKY---VVLLDGAPAAEAFDTAFD--PVFSPDGRKLLLRGVRNGKA 417



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 46/313 (14%), Positives = 92/313 (29%), Gaps = 61/313 (19%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   S +   S  + +   ++    M  +G     L  + +        SP   K A   
Sbjct: 112 GYLWSTMFGPSGDIAAPAQQDGEYGMVLNGTPWETLYENANNYC----ISPAGGKTAAVV 167

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMIL----APRFSSNGKRALISVQKDEAMDIYS 286
                             +    G    +       P FS++G+R  + V+++      +
Sbjct: 168 QTRSMGQADVATFQEGIYSVAVNGEAWPVNFVNCWTPVFSADGRRVAVQVRRNLHDYTIA 227

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           VD         T          + P S  +     + G   ++ +  +G   + + + + 
Sbjct: 228 VDG-----TPWTINYQCVWEPCFHPSSGGVAAPVRQNG---MWGVALDG---QMLWKARN 276

Query: 347 ASYFDPVWSPQGDLI-AFTKFSGEKFAI----------------GVMKKDGSQERLLVED 389
           A  ++  +SP G  + A        F +                 V+   G +   L  D
Sbjct: 277 AQCWNLRYSPDGSHLWAVVAPEYGMFTVSLDDTPWTFRAPVVTDMVLSPSGDRAAALASD 336

Query: 390 SN------------------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +N                     P +SP G  +    +++G      Y + L+G      
Sbjct: 337 NNTLWQVVVDGKPWRGTYDMAWQPVFSPDGTRVAARVERNGK-----YVVLLDGAPAAEA 391

Query: 432 NTPAYASDPQWVG 444
              A+  DP +  
Sbjct: 392 FDTAF--DPVFSP 402



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 76/218 (34%), Gaps = 33/218 (15%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ ++ A  T  DE    + + D   +    +I         PRFS +G+   + VQ+D
Sbjct: 44  SPDGERFAAVTALDETTFSLRINDQTQEATYDKI-------WLPRFSPDGRLTAL-VQED 95

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               +          E          S  + P    I   + ++G+   Y M  NG+  +
Sbjct: 96  GEWTMLV------EEEAWPGHYGYLWSTMFGPSGD-IAAPAQQDGE---YGMVLNGTPWE 145

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVEDSNL 392
            +      +  +   SP G   A    +          F  G+     + E   V   N 
Sbjct: 146 TL----YENANNYCISPAGGKTAAVVQTRSMGQADVATFQEGIYSVAVNGEAWPVNFVNC 201

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             P +S  GR +    +++       Y+I ++G   T+
Sbjct: 202 WTPVFSADGRRVAVQVRRNLHD----YTIAVDGTPWTI 235



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 37/100 (37%), Gaps = 12/100 (12%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N+L  +  DG   R        + ++P FSP+  +VA     + +   V L+D       
Sbjct: 338 NTLWQVVVDGKPWRGTYD----MAWQPVFSPDGTRVA--ARVERNGKYVVLLDGAPA--- 388

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                       P FS +G++ L+   ++         LQ
Sbjct: 389 ---AEAFDTAFDPVFSPDGRKLLLRGVRNGKAVRIVKQLQ 425



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 71/215 (33%), Gaps = 35/215 (16%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++ PRFSP+ +  A    D E     + M    +  P   G   S +  P  S +     
Sbjct: 77  IWLPRFSPDGRLTALVQEDGE-----WTMLVEEEAWPGHYGYLWSTMFGP--SGD---IA 126

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ------ 327
              Q+D     Y + L     E L      N     SP   +           Q      
Sbjct: 127 APAQQDGE---YGMVLNGTPWETL-YENANNY--CISPAGGKTAAVVQTRSMGQADVATF 180

Query: 328 ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQE 383
              +Y +  NG            + + PV+S  G  +A   + +   + I V   DG+  
Sbjct: 181 QEGIYSVAVNGEA----WPVNFVNCWTPVFSADGRRVAVQVRRNLHDYTIAV---DGTPW 233

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +  +   +  P + PS   +    +++G  G  L
Sbjct: 234 TINYQ--CVWEPCFHPSSGGVAAPVRQNGMWGVAL 266


>gi|87310886|ref|ZP_01093012.1| probable vegetatible incompatibility protein [Blastopirellula
           marina DSM 3645]
 gi|87286401|gb|EAQ78309.1| probable vegetatible incompatibility protein [Blastopirellula
           marina DSM 3645]
          Length = 464

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/316 (13%), Positives = 93/316 (29%), Gaps = 65/316 (20%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           +PAS R       D  +  +        S       S+++    + + +   DG+ +   
Sbjct: 122 TPASTRPTI----DHDHPPVYSLPPVLTSIEYSPDGSMLAVSGYHEVLLQKADGSGVAQR 177

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +   RFSP+ +++  A      +  + + D         +      I    +S
Sbjct: 178 LVGMSERIESARFSPDGERLVVAGGSPGRLGELQMWDVESGELTYSLPVSYDTIYGANWS 237

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFES---- 320
            +GK+            +   + ++   + L N    +     ++S D S +V  S    
Sbjct: 238 PDGKQV---SVGCGDNTVRVFNAETGD-QVLFNGAHEDWALDTTFSVDGSHLVSVSRDMT 293

Query: 321 ------------------------------------------DREGKEQLYVMQS----- 333
                                                       +G  ++Y M       
Sbjct: 294 MKLYEVKTERFIDNITSITPGALKGGIAAVMRHPTEDQLLIGGADGIPKIYKMFREKDRK 353

Query: 334 --NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLV-ED 389
             +  +  R         FD  +SP   L+A    + +   I +    DG   R +  + 
Sbjct: 354 IGDDFNLIRAFPALPGRVFDVAFSPDASLVAACSSNDQTGEIHLFNTADGKLLRQMAAQQ 413

Query: 390 SNLQAPTWSPSGRSLI 405
             + +  +SP G+ L 
Sbjct: 414 GAVYSIAFSPDGQQLA 429



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 73/217 (33%), Gaps = 22/217 (10%)

Query: 222 NQQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           ++Q +A + +   +D        T     P  + +   ++ +  +S +G    +S     
Sbjct: 106 DRQTLALWISQGAKDDTPASTRPTIDHDHP-PVYSLPPVLTSIEYSPDGSMLAVS----G 160

Query: 281 AMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQ 338
             ++           +RL        SA +SPD  ++V      G+  +L +      + 
Sbjct: 161 YHEVLLQKADGSGVAQRLVGMSERIESARFSPDGERLVVAGGSPGRLGELQMWDVESGEL 220

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--- 395
                    + +   WSP G  +           + V   +    ++L   ++       
Sbjct: 221 TYSLPVSYDTIYGANWSPDGKQV---SVGCGDNTVRVFNAETGD-QVLFNGAHEDWALDT 276

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           T+S  G  L+   +   D   KLY +    + E  I+
Sbjct: 277 TFSVDGSHLVSVSR---DMTMKLYEV----KTERFID 306



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 54/326 (16%), Positives = 107/326 (32%), Gaps = 44/326 (13%)

Query: 73  LQRSDVFNLI----SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           L  S    ++          Q++           ++  G +++V G        RL  E 
Sbjct: 156 LAVSGYHEVLLQKADGSGVAQRLVGMSERIESARFSPDGERLVVAGG----SPGRL-GEL 210

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           ++WDV+  +       +S P S+        D IY +     G          + V  G 
Sbjct: 211 QMWDVESGEL-----TYSLPVSY--------DTIYGANWSPDG----------KQVSVGC 247

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRID 247
             N++ V + +  +      + +    +  FS +   +   + D    +  V       +
Sbjct: 248 GDNTVRVFNAETGDQVLFNGAHEDWALDTTFSVDGSHLVSVSRDMTMKLYEVKTERFIDN 307

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNT--- 300
                 G  +  I A        + LI    D    IY +    D +      L      
Sbjct: 308 ITSITPGALKGGIAAVMRHPTEDQLLIGG-ADGIPKIYKMFREKDRKIGDDFNLIRAFPA 366

Query: 301 -LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                   ++SPD+S +   S  +   ++++  +      R    ++ + +   +SP G 
Sbjct: 367 LPGRVFDVAFSPDASLVAACSSNDQTGEIHLFNTADGKLLRQMAAQQGAVYSIAFSPDGQ 426

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERL 385
            +A   F G    I ++K DG+  R 
Sbjct: 427 QLASVGFDG-VVRINLVK-DGTLVRQ 450


>gi|327540641|gb|EGF27215.1| tolB protein [Rhodopirellula baltica WH47]
          Length = 309

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 89/291 (30%), Gaps = 37/291 (12%)

Query: 185 VSGIIKNSLCVMDRDGANIRYL-----TPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            +   +  L +   DG  IR L        R     +P  S + + +A+  + ++     
Sbjct: 5   PTQPERQILHLCKPDGTPIRPLVLDESLRERFDSQGKPEISADGKWIAFDAWTNDPKRTR 64

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-----VQKDE--AMDIYSVDLQSN 292
                 I     +          P FS +GKR + S        D      I+ +D+  +
Sbjct: 65  QESKIVIVDFDGQKTTNIIDGSLPSFSPDGKRLVFSRPRRYTNTDGAEGTSIWIMDIDGD 124

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQ------LYVMQSNGSDQKRISQDKE 346
               + +         +SPD   IVF               L +          I    +
Sbjct: 125 NRMMVAHRGAW--GGRWSPDGKSIVFFGGENENGIAVPKSCLRLFDIETQTTTNIFSPDD 182

Query: 347 ASY----FDPVWS-PQGDLIAFTKFSGEKFAIG--VMKKDGSQERLLVEDSNLQ------ 393
           + +    F   W+      + F     +   +   V++ D     L+V   +        
Sbjct: 183 SPFGELSFHFEWAKDDSRRVVFGGPLKDTQELATGVIQVDEGISSLMVRTGDTMEAGLLH 242

Query: 394 --APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA--SDP 440
             +  W+P+G S + +            SIDL   ++T    P     SDP
Sbjct: 243 GSSYDWNPNGNSFLMAGTVGDRVLPIAVSIDLVEASQTFDGIPENVSTSDP 293



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 64/136 (47%), Gaps = 20/136 (14%)

Query: 325 KEQLYVMQSNGSDQKRI-----SQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAI 373
           ++ L++ + +G+  + +      +++  S   P  S  G  IAF  ++ +      +  I
Sbjct: 10  RQILHLCKPDGTPIRPLVLDESLRERFDSQGKPEISADGKWIAFDAWTNDPKRTRQESKI 69

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-----KKDGDTGSKLYSIDLNGRNE 428
            ++  DG +   +++ S    P++SP G+ L+FSR       DG  G+ ++ +D++G N 
Sbjct: 70  VIVDFDGQKTTNIIDGSL---PSFSPDGKRLVFSRPRRYTNTDGAEGTSIWIMDIDGDNR 126

Query: 429 TLINTPAYASDPQWVG 444
            ++     A   +W  
Sbjct: 127 MMVAHRG-AWGGRWSP 141



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 69/213 (32%), Gaps = 40/213 (18%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             +   G    S+ +MD DG N   +        +  R+SP+ + + +   ++E+ + V 
Sbjct: 104 RYTNTDGAEGTSIWIMDIDGDNRMMVAHRG---AWGGRWSPDGKSIVFFGGENENGIAVP 160

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSS-------------NGKRALI------------- 274
               R+     +       I +P  S              + +R +              
Sbjct: 161 KSCLRLFDIETQTTT---NIFSPDDSPFGELSFHFEWAKDDSRRVVFGGPLKDTQELATG 217

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +Q DE +    V         L +    +    ++P+ +  +       +     +  +
Sbjct: 218 VIQVDEGISSLMVRTGDTMEAGLLHGSSYD----WNPNGNSFLMAGTVGDRVLPIAVSID 273

Query: 335 GSDQKRISQDK---EASYFDPVWSPQGDLIAFT 364
             +  + + D      S  DP+ +P G+ +  +
Sbjct: 274 LVEASQ-TFDGIPENVSTSDPIHTPDGNHLIVS 305


>gi|291445391|ref|ZP_06584781.1| protease [Streptomyces roseosporus NRRL 15998]
 gi|291348338|gb|EFE75242.1| protease [Streptomyces roseosporus NRRL 15998]
          Length = 1152

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 70/200 (35%), Gaps = 30/200 (15%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+   R+ +  PRFS +G     +  +    +I+   +      RLT     +     +S
Sbjct: 61  RVTVDRTRVSHPRFSPDGTSIAYTTWRTLDPEIHLAPVDGGPARRLTYWGSTDARVCGWS 120

Query: 311 PD----SSQIVFESDREGKEQL---YVMQSNGSDQKRISQ-----------DKEASYFDP 352
           PD       +   S  +        Y + ++GS   R+             D E      
Sbjct: 121 PDPGDACQILAVSSHNQPFSYFSWAYSVPTDGSPGGRLPWGPVSDIAVADIDGERRTLLL 180

Query: 353 VWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKK 410
             +P  +  A+ ++ G     + +       ERLL + D +L  P +   GR + F    
Sbjct: 181 TGTPPHEPAAWKRYRGGAMGRLWLH-----GERLLPDIDGHLANPMFV--GRRIAFLSDH 233

Query: 411 DGDTGSKLYSIDLNGRNETL 430
            G     LYS  ++G +   
Sbjct: 234 QG--VGNLYSCRMDGTDLRR 251



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 86/263 (32%), Gaps = 22/263 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAP 250
             +  RDG   R +  +    +  P    +  +VAY T  D    +   YL     DR P
Sbjct: 337 YWLTHRDG-PARTIADTPGVRVRLPEMLGSGGQVAYVTDADGPDAVEIAYLPRASGDRPP 395

Query: 251 KRIGNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           +R+       +    S  +GKR  I+   D  + +    L +   E         +    
Sbjct: 396 RRLATGLLGRVQEMISDPDGKRLAIA-SNDGRLLL----LDTGEEEA-EAEPLEPVEPMV 449

Query: 310 -SPDSSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK- 365
            +P  S       +         V          + +       D  +SP GD + ++  
Sbjct: 450 KAPSGSTRADLHAATGAATPDSAVPVDEHPGLTELIRSVNGPVRDLAFSPDGDWLTWSHP 509

Query: 366 ---FSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYS 420
               S  +  +  +   G+   + V +   +   P ++  GR L F   +  D    +++
Sbjct: 510 GVGRSLRQIKLARISGPGAPVIVDVTNGRFEDENPVFTEDGRYLAFLSWRGFDPVYDVHT 569

Query: 421 IDLN---GRNETLINTPAYASDP 440
            DL+   G    L+   +    P
Sbjct: 570 GDLSFPLGCRPYLVPLSSATPSP 592



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 64/219 (29%), Gaps = 42/219 (19%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ----QKVAYATYDDEDILRVYLMDTRID 247
            + +   DG   R LT           +SP+     Q +A ++++       +      D
Sbjct: 92  EIHLAPVDGGPARRLTYWGSTDARVCGWSPDPGDACQILAVSSHNQPFSYFSWAYSVPTD 151

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                             S  G+     +      DI   D+       L          
Sbjct: 152 G-----------------SPGGR-----LPWGPVSDIAVADIDGERRTLLLTG------- 182

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +P      ++  R G      +  +G   +R+  D +    +P++   G  IAF    
Sbjct: 183 --TPPHEPAAWKRYRGGAMG--RLWLHG---ERLLPDIDGHLANPMFV--GRRIAFLSDH 233

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                +   + DG+  R   +     A   S  G  +I+
Sbjct: 234 QGVGNLYSCRMDGTDLRRHTDHDAFYARNASSDGHRVIY 272



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 33/121 (27%), Gaps = 9/121 (7%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERL---TNTLF 302
              + I +    +    FS +G     S          I    +       +   TN  F
Sbjct: 480 GLTELIRSVNGPVRDLAFSPDGDWLTWSHPGVGRSLRQIKLARISGPGAPVIVDVTNGRF 539

Query: 303 INISASYSPDSSQIVFESDREGKEQLYV----MQSNGSDQKRISQDKEASYFDPVWSPQG 358
            + +  ++ D   + F S R       V    +      +  +     A+      SP G
Sbjct: 540 EDENPVFTEDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSPFALSPDG 599

Query: 359 D 359
            
Sbjct: 600 R 600


>gi|326335496|ref|ZP_08201683.1| prolyl oligopeptidase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325692262|gb|EGD34214.1| prolyl oligopeptidase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 634

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 70/181 (38%), Gaps = 18/181 (9%)

Query: 265 FSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQ 315
           +S++GK+ L   +             DIY  D+ S  T  LT  +   + + S++ D   
Sbjct: 176 WSNDGKQVLYVTKAKVGTQYAVSTNTDIYQYDIASKTTTNLTEGMMGYDTNPSFNKDGVL 235

Query: 316 IVFESDREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                  +G       LY++Q+    +  I+   + + F  +WS  G  I  T       
Sbjct: 236 AWLSMKEDGNEADKNDLYILQN--GKRINITATWDNTVFSYIWSNDGRKIYLTAAIDGTQ 293

Query: 372 AIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            I  ++        + + +           SG  LI SR  D +  ++LY+++L GR   
Sbjct: 294 QIFEIEPFAKNPFPKQITKGIFDINDIIGQSGDLLIVSRT-DMNRATELYTVNLRGRKSN 352

Query: 430 L 430
           L
Sbjct: 353 L 353



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 100/285 (35%), Gaps = 40/285 (14%)

Query: 127 EFRLWD-VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF---VSE 182
            F+L+D       ++ K F+             S  IY+ +     D  +   +     E
Sbjct: 93  SFKLFDKTVKINSVLAKDFYKDLG-------KSSGRIYEGLDHRHWDKWNEGTYNHVFIE 145

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-------YDDED 235
           ++ +G+  + +  +       +  +   +  +    +S + ++V Y T       Y    
Sbjct: 146 NIATGVQTDIMQGLPY--YCPQEPSGGPEDYI----WSNDGKQVLYVTKAKVGTQYAVST 199

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA----MDIYSVDLQS 291
              +Y  D                   P F+ +G  A +S+++D       D+Y   LQ+
Sbjct: 200 NTDIYQYDIASKTTTNLTEGMMGYDTNPSFNKDGVLAWLSMKEDGNEADKNDLYI--LQN 257

Query: 292 NATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSD--QKRISQDKEAS 348
                +T T    + S  +S D  +I   +  +G +Q++ ++    +   K+I++     
Sbjct: 258 GKRINITATWDNTVFSYIWSNDGRKIYLTAAIDGTQQIFEIEPFAKNPFPKQITKG--IF 315

Query: 349 YFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGS----QERLLVE 388
             + +    GDL+  ++        +  +   G     + R L  
Sbjct: 316 DINDIIGQSGDLLIVSRTDMNRATELYTVNLRGRKSNLEVRQLSH 360



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 82/215 (38%), Gaps = 18/215 (8%)

Query: 176 RILFVSESVVSGII----KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           ++L+V+++ V           +   D        LT         P F+ +   +A+ + 
Sbjct: 182 QVLYVTKAKVGTQYAVSTNTDIYQYDIASKTTTNLTEGMMGYDTNPSFNKDG-VLAWLSM 240

Query: 232 DDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             ED       D  I +  KRI     + + + +  +S++G++  ++   D    I+ ++
Sbjct: 241 -KEDGNEADKNDLYILQNGKRINITATWDNTVFSYIWSNDGRKIYLTAAIDGTQQIFEIE 299

Query: 289 LQSNA--TERLTNTLFINISASYSPDSS-QIVFESDREGKEQLYVMQSNGS----DQKRI 341
             +     +++T  +F +I+          IV  +D     +LY +   G     + +++
Sbjct: 300 PFAKNPFPKQITKGIF-DINDIIGQSGDLLIVSRTDMNRATELYTVNLRGRKSNLEVRQL 358

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           S   +  Y +    P  +    T   G+   + VM
Sbjct: 359 SHVNDDLYKNIAKCPVKERTVKTS-DGKDMLVWVM 392


>gi|298251893|ref|ZP_06975696.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297546485|gb|EFH80353.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 640

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/268 (17%), Positives = 95/268 (35%), Gaps = 26/268 (9%)

Query: 157 TISDDIYQSITGE--KGDFNSRILFVSESVVSGIIKNSLCVMDRDG-----ANIRYLTPS 209
           T SDDIY   +G      +++  ++++    S     ++ V+D  G      N    +  
Sbjct: 378 TASDDIYAGHSGPVYNIAWHAHDMYMA----SASADRTVQVIDLGGDPDAHGNNLSSSYR 433

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    +SP+ +    A+ D    +++  +   ID            + A  +S +G
Sbjct: 434 HKGAVNGVSWSPDGKYFVLASAD--GTVQISSITNTIDAVLT-YTGHTGEVRAVAWSPDG 490

Query: 270 KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           K+ + S   D ++ ++  D Q+      +     I   A +S    +I F      ++ +
Sbjct: 491 KKIV-SASTDGSVQVW--DAQTGKTLTTIKQAGAIYTVA-WSIGGDRIAFG---GAQKNV 543

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +V            +  + +     WSP  D    +  +     I     + S E  +  
Sbjct: 544 FVWNPIDGHIISTYRGHKGAILSLAWSPMSDEHIVSASADGTAQI----SNASDESHVFT 599

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
              L+ P +S +GR   F        GS
Sbjct: 600 GHRLRMPPFSNAGRKQAFLVGVGQRRGS 627



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 30/102 (29%), Gaps = 4/102 (3%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           S   + +     WSP G         G      +     +          ++A  WSP G
Sbjct: 431 SYRHKGAVNGVSWSPDGKYFVLASADGTVQISSITNTIDAVLTYTGHTGEVRAVAWSPDG 490

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           + ++ +     D   +++     G+  T I          W 
Sbjct: 491 KKIVSAST---DGSVQVWDA-QTGKTLTTIKQAGAIYTVAWS 528


>gi|229493145|ref|ZP_04386937.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Rhodococcus erythropolis SK121]
 gi|229319876|gb|EEN85705.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Rhodococcus erythropolis SK121]
          Length = 677

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 81/265 (30%), Gaps = 30/265 (11%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V S      +  M   G  +R+               P+   +  A  D ++ + +  
Sbjct: 154 DQVRSARKDKKVTAMLHTGYPVRHWDHDLG---------PDHPHLVVAETDSKESVELRD 204

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-----AMDIYSVDLQSNATER 296
           +      A +              S +G   + +    +        +  +D  +     
Sbjct: 205 ITPTAGAALRETST--------TISDDGLFVVTTWTVGDPSAARRSTLVRIDTVTGDRTT 256

Query: 297 LTNTLFINI-SASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDKEASY 349
           L +    ++ +   SPD +++ F  +         +  L +          ++   +   
Sbjct: 257 LVDEADADVYNPVLSPDGTKLAFIRETLTTPESAPRMTLQLYDFGSGAVTGVADGWDRWP 316

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               W P G  +  T   G +  I  +   G   RL  +D+       +P G S+ ++ +
Sbjct: 317 TSLAWLPDGSGLVVTADDGGRGPIFTIDLWGQPVRLTADDAAYTDVRVAPDGESI-YALR 375

Query: 410 KDGDTGSKLYSIDLNGRNETLINTP 434
              +    +  +DL     T +  P
Sbjct: 376 ASYEAPPHVVRVDLRSGEITALRGP 400



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 64/209 (30%), Gaps = 7/209 (3%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++ +         R I  T    + ++ T    D    +   +    S   +++L  +D 
Sbjct: 190 VVAETDSKESVELRDITPTAGAALRETSTTISDDGLFVVTTWTVGDPSAARRSTLVRIDT 249

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNF 256
              +   L    D  ++ P  SP+  K+A+   T    +      +      +    G  
Sbjct: 250 VTGDRTTLVDEADADVYNPVLSPDGTKLAFIRETLTTPESAPRMTLQLYDFGSGAVTGVA 309

Query: 257 RSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                 P    +  +G   +++        I+++DL      RLT           +PD 
Sbjct: 310 DGWDRWPTSLAWLPDGSGLVVTADDGGRGPIFTIDL-WGQPVRLTADDAAYTDVRVAPDG 368

Query: 314 SQI-VFESDREGKEQLYVMQSNGSDQKRI 341
             I    +  E    +  +     +   +
Sbjct: 369 ESIYALRASYEAPPHVVRVDLRSGEITAL 397



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 80/296 (27%), Gaps = 74/296 (25%)

Query: 220 SPNQQKV--AYATYDDEDILRV---YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+   +  A A  DD+    V   + +D    R  +R+    +      F+ +G     
Sbjct: 31  SPDGSLLICARAVLDDKSAEYVSSLWEIDPEGRRPARRLTWGSTSESGAAFAFDGDVLFT 90

Query: 275 SVQK-----DEAMDIYSVDLQSNATERLTNTLFINIS-------ASYSPDSSQIV----- 317
           + +      D    ++ +       + L +      S        ++   +S +      
Sbjct: 91  ATRAVPGESDPQPALWCLPAAGGEAQLLISRPGGVSSVSAAKAAPTFVAQTSVMASAISL 150

Query: 318 -----FESDREGK-----------------------EQLYVMQSNGSDQKRI-----SQD 344
                  S R+ K                         L V +++  +   +     +  
Sbjct: 151 DQDDQVRSARKDKKVTAMLHTGYPVRHWDHDLGPDHPHLVVAETDSKESVELRDITPTAG 210

Query: 345 KEASYFDPVWSPQGDLIAFTKFSG-----EKFAIGVMKKDGSQERLLVE--DSNLQAPTW 397
                     S  G  +  T   G      +  +  +         LV+  D+++  P  
Sbjct: 211 AALRETSTTISDDGLFVVTTWTVGDPSAARRSTLVRIDTVTGDRTTLVDEADADVYNPVL 270

Query: 398 SPSGRSLIFSR------KKDGDTGSKLYSIDLNGRNETLINTPAYASDP---QWVG 444
           SP G  L F R      +       +LY     G          +   P    W+ 
Sbjct: 271 SPDGTKLAFIRETLTTPESAPRMTLQLYDF---GSGAVTGVADGWDRWPTSLAWLP 323


>gi|294012990|ref|YP_003546450.1| putative peptidase [Sphingobium japonicum UT26S]
 gi|292676320|dbj|BAI97838.1| putative peptidase [Sphingobium japonicum UT26S]
          Length = 705

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 52/154 (33%), Gaps = 33/154 (21%)

Query: 265 FSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            S +G++    + + EA        +  +D++ +A  RL                     
Sbjct: 73  LSPDGRQLAFILIRAEASTNSYCIGLAVMDVKPSARPRL--------------------- 111

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             D+ G+         G     I          P WSP G  IAF +       +  ++ 
Sbjct: 112 -LDQGGEFIGGTGDYRG----VILPTGFPILLAPSWSPDGRWIAFLRRDKGVTQLWTVRA 166

Query: 379 DGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKD 411
           D    R +     +++   W P GRSLI++ +  
Sbjct: 167 DAGPARAVTHSPVDVEQFAWGPDGRSLIYASRTG 200



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 51/128 (39%), Gaps = 24/128 (18%)

Query: 220 SPNQQKVAYATYDDEDILRVY-----LMDTRIDRAPKRI----------GNFRSMIL--- 261
           SP+ +++A+     E     Y     +MD +    P+ +          G++R +IL   
Sbjct: 74  SPDGRQLAFILIRAEASTNSYCIGLAVMDVKPSARPRLLDQGGEFIGGTGDYRGVILPTG 133

Query: 262 -----APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                AP +S +G+      +      +++V   +     +T++       ++ PD   +
Sbjct: 134 FPILLAPSWSPDGRWIAFLRRDKGVTQLWTVRADAGPARAVTHSPVDVEQFAWGPDGRSL 193

Query: 317 VFESDREG 324
           ++ S R G
Sbjct: 194 IYAS-RTG 200



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 41/125 (32%), Gaps = 29/125 (23%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQ------- 393
            +      SP G  +AF     E         + VM    S    L++            
Sbjct: 66  GNKSPLGLSPDGRQLAFILIRAEASTNSYCIGLAVMDVKPSARPRLLDQGGEFIGGTGDY 125

Query: 394 -------------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASD 439
                        AP+WSP GR + F R+  G   ++L+++  + G    + ++P     
Sbjct: 126 RGVILPTGFPILLAPSWSPDGRWIAFLRRDKG--VTQLWTVRADAGPARAVTHSPVDVEQ 183

Query: 440 PQWVG 444
             W  
Sbjct: 184 FAWGP 188



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 31/76 (40%), Gaps = 4/76 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPR 264
           + P+   IL  P +SP+ + +A+   D        L   R D  P R + +    +    
Sbjct: 129 ILPTGFPILLAPSWSPDGRWIAFLRRDKG---VTQLWTVRADAGPARAVTHSPVDVEQFA 185

Query: 265 FSSNGKRALISVQKDE 280
           +  +G+  + + +  +
Sbjct: 186 WGPDGRSLIYASRTGQ 201


>gi|186685985|ref|YP_001869181.1| WD40-like beta propeller [Nostoc punctiforme PCC 73102]
 gi|186468437|gb|ACC84238.1| WD40-like beta propeller [Nostoc punctiforme PCC 73102]
          Length = 186

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 50/139 (35%), Gaps = 9/139 (6%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI------SASYSPDSSQI 316
           P  S NG+       ++    +   DL+    ++   T  IN       S S S     I
Sbjct: 50  PALSGNGRFLAFVSNRNGNQQLLVFDLE---RQQFIGTPGINRAETIAESPSLSYTGRYI 106

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            + +  +G+  + +        + ++         P  SP G  + F   S  ++ I V+
Sbjct: 107 AYLTSDQGRPVVALYDRATQQSQIVTPTYRGWIRKPNISPDGRYVVFETASRGQWDIEVL 166

Query: 377 KKDGSQERLLVEDSNLQAP 395
            +  + E  +   + + +P
Sbjct: 167 DRGPNIELDIPNGATVGSP 185



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 53/148 (35%), Gaps = 10/148 (6%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK----EASYFDPVW 354
           N+ +     + S +   + F S+R G +QL V       Q+ I        E     P  
Sbjct: 42  NSRYTEEQPALSGNGRFLAFVSNRNGNQQLLVFDLE--RQQFIGTPGINRAETIAESPSL 99

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDG 412
           S  G  IA+      +  + +  +   Q +++       ++ P  SP GR ++F     G
Sbjct: 100 SYTGRYIAYLTSDQGRPVVALYDRATQQSQIVTPTYRGWIRKPNISPDGRYVVFETASRG 159

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDP 440
               ++  +D     E  I   A    P
Sbjct: 160 QWDIEV--LDRGPNIELDIPNGATVGSP 185



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 46/119 (38%), Gaps = 2/119 (1%)

Query: 216 EPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +P  S N + +A+ +  + +  L V+ ++ +       I    ++  +P  S  G+    
Sbjct: 49  QPALSGNGRFLAFVSNRNGNQQLLVFDLERQQFIGTPGINRAETIAESPSLSYTGRYIAY 108

Query: 275 SVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                    +   D  +  ++ +T          + SPD   +VFE+   G+  + V+ 
Sbjct: 109 LTSDQGRPVVALYDRATQQSQIVTPTYRGWIRKPNISPDGRYVVFETASRGQWDIEVLD 167



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 1/81 (1%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              + I   P  S   + +AY T D    + V L D    ++      +R  I  P  S 
Sbjct: 88  NRAETIAESPSLSYTGRYIAYLTSDQGRPV-VALYDRATQQSQIVTPTYRGWIRKPNISP 146

Query: 268 NGKRALISVQKDEAMDIYSVD 288
           +G+  +         DI  +D
Sbjct: 147 DGRYVVFETASRGQWDIEVLD 167



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 7/99 (7%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG----SQERLLVEDSNLQAPTW 397
           S +   +   P  S  G  +AF         + V   +         +   ++  ++P+ 
Sbjct: 40  SLNSRYTEEQPALSGNGRFLAFVSNRNGNQQLLVFDLERQQFIGTPGINRAETIAESPSL 99

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           S +GR + +     G     LY        ++ I TP Y
Sbjct: 100 SYTGRYIAYLTSDQGRPVVALYD---RATQQSQIVTPTY 135


>gi|332525793|ref|ZP_08401936.1| peptidase S9 prolyl oligopeptidase [Rubrivivax benzoatilyticus JA2]
 gi|332109346|gb|EGJ10269.1| peptidase S9 prolyl oligopeptidase [Rubrivivax benzoatilyticus JA2]
          Length = 679

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 13/119 (10%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDS 313
           I AP  S +G +A+ +V +    D      ++       A   LT     +    +SP  
Sbjct: 17  IGAPSLSPDGAQAVAAVTRYSMEDNKSASSLWLFSTLGGAARALTACGDKDGQPRWSPKG 76

Query: 314 SQIVFESDR------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             + F + R      +   QLYV+  +G + +R +           W P G  + F  +
Sbjct: 77  DLVAFVARREQQGEKDETAQLYVIAPDGGEARRAATVATG-IEAFRWCPDGRRLLFVSW 134



 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/258 (18%), Positives = 85/258 (32%), Gaps = 25/258 (9%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
                S+      +SL +    G   R LT   D+   +PR+SP    VA+    ++   
Sbjct: 32  AVTRYSMEDNKSASSLWLFSTLGGAARALTACGDK-DGQPRWSPKGDLVAFVARREQQGE 90

Query: 238 RVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +       +        +R     + I A R+  +G+R L                +   
Sbjct: 91  KDETAQLYVIAPDGGEARRAATVATGIEAFRWCPDGRRLLFVSWVWPDAKGTKEQAKRAK 150

Query: 294 TERLTNTLFINISAS----YS---PDSSQI---VFESDREGKEQLYVMQSNGSDQKRISQ 343
             +         S +    +    P        + E  R+G          G+  +    
Sbjct: 151 AFKERKESGYATSEAQYRYWDHQLPLGRVPHLHLLELGRDGAAAKVRDLFEGTPYEIRRH 210

Query: 344 DKEASYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQ--AP 395
           D +A  FD   SP G  + F       K    +FA+  ++    +  ++V+D++    AP
Sbjct: 211 DPDADCFD--VSPDGKRVVFAFDPAPEKRIDNRFALAELELKSGRVSVIVQDADWDCSAP 268

Query: 396 TWSPSGRSLIFSRKKDGD 413
            +SP G  + F     G 
Sbjct: 269 RYSPEGERIAFIASHQGR 286



 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 58/286 (20%), Positives = 102/286 (35%), Gaps = 28/286 (9%)

Query: 177 ILFVSESVVSGIIKNS--LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV+     G    +  L V+  DG   R        I    R+ P+ +++ + ++   
Sbjct: 79  VAFVARREQQGEKDETAQLYVIAPDGGEARRAATVATGIEAF-RWCPDGRRLLFVSWVWP 137

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPR--FS---SNGKR---ALISVQKDEAMDIYS 286
           D         R     +R  +  +   A    +      G+     L+ + +D A     
Sbjct: 138 DAKGTKEQAKRAKAFKERKESGYATSEAQYRYWDHQLPLGRVPHLHLLELGRDGAAAKVR 197

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQKR 340
            DL       +            SPD  ++VF  D       + +  L  ++        
Sbjct: 198 -DLFEGTPYEIRRHDPDADCFDVSPDGKRVVFAFDPAPEKRIDNRFALAELELKSGRVSV 256

Query: 341 ISQDKEASYFDPVWSPQGDLIAFT-KFSGEKF----AIGVMKKDGSQERLLVE--DSNLQ 393
           I QD +     P +SP+G+ IAF     G K      + V  +D S+  +L E  D ++Q
Sbjct: 257 IVQDADWDCSAPRYSPEGERIAFIASHQGRKHTMPGQVAVWYRDESRWEVLSEAWDHDVQ 316

Query: 394 AP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           AP  W   G++L+   ++ G     L+  DL  R   L+       
Sbjct: 317 APLAWEDDGQALLLRAEQRGRQ--HLWRFDLPDRRAELVVEGGTVQ 360



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 14/115 (12%)

Query: 307 ASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            S SPD +Q V    R      +    L++  + G   + ++   +     P WSP+GDL
Sbjct: 20  PSLSPDGAQAVAAVTRYSMEDNKSASSLWLFSTLGGAARALTACGD-KDGQPRWSPKGDL 78

Query: 361 IAFTKFS------GEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSR 408
           +AF           E   + V+  DG + R      + ++A  W P GR L+F  
Sbjct: 79  VAFVARREQQGEKDETAQLYVIAPDGGEARRAATVATGIEAFRWCPDGRRLLFVS 133



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/148 (12%), Positives = 52/148 (35%), Gaps = 16/148 (10%)

Query: 220 SPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ ++V +A          +   +  ++ +  R    + +      APR+S  G+R   
Sbjct: 220 SPDGKRVVFAFDPAPEKRIDNRFALAELELKSGRVSVIVQDADWDCSAPRYSPEGERIAF 279

Query: 275 SVQKDEAMDIYSVD-------LQSNATERLTNTLFINISA--SYSPDSSQIVFESDREGK 325
                     +++           +  E L+     ++ A  ++  D   ++  +++ G+
Sbjct: 280 IASHQGRK--HTMPGQVAVWYRDESRWEVLSEAWDHDVQAPLAWEDDGQALLLRAEQRGR 337

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPV 353
           + L+         + + +      FD  
Sbjct: 338 QHLWRFDLPDRRAELVVEGGTVQAFDKA 365



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 11/95 (11%)

Query: 350 FDPVWSPQG-DLIAFTKF-----SGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGR 402
             P  SP G   +A         +    ++ +    G   R L    +    P WSP G 
Sbjct: 18  GAPSLSPDGAQAVAAVTRYSMEDNKSASSLWLFSTLGGAARALTACGDKDGQPRWSPKGD 77

Query: 403 SLIFSRKK----DGDTGSKLYSIDLNGRNETLINT 433
            + F  ++    + D  ++LY I  +G       T
Sbjct: 78  LVAFVARREQQGEKDETAQLYVIAPDGGEARRAAT 112


>gi|239941941|ref|ZP_04693878.1| putative protease [Streptomyces roseosporus NRRL 15998]
 gi|239988405|ref|ZP_04709069.1| putative protease [Streptomyces roseosporus NRRL 11379]
          Length = 1134

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 70/200 (35%), Gaps = 30/200 (15%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+   R+ +  PRFS +G     +  +    +I+   +      RLT     +     +S
Sbjct: 43  RVTVDRTRVSHPRFSPDGTSIAYTTWRTLDPEIHLAPVDGGPARRLTYWGSTDARVCGWS 102

Query: 311 PD----SSQIVFESDREGKEQL---YVMQSNGSDQKRISQ-----------DKEASYFDP 352
           PD       +   S  +        Y + ++GS   R+             D E      
Sbjct: 103 PDPGDACQILAVSSHNQPFSYFSWAYSVPTDGSPGGRLPWGPVSDIAVADIDGERRTLLL 162

Query: 353 VWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKK 410
             +P  +  A+ ++ G     + +       ERLL + D +L  P +   GR + F    
Sbjct: 163 TGTPPHEPAAWKRYRGGAMGRLWLH-----GERLLPDIDGHLANPMFV--GRRIAFLSDH 215

Query: 411 DGDTGSKLYSIDLNGRNETL 430
            G     LYS  ++G +   
Sbjct: 216 QG--VGNLYSCRMDGTDLRR 233



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 86/263 (32%), Gaps = 22/263 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAP 250
             +  RDG   R +  +    +  P    +  +VAY T  D    +   YL     DR P
Sbjct: 319 YWLTHRDG-PARTIADTPGVRVRLPEMLGSGGQVAYVTDADGPDAVEIAYLPRASGDRPP 377

Query: 251 KRIGNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           +R+       +    S  +GKR  I+   D  + +    L +   E         +    
Sbjct: 378 RRLATGLLGRVQEMISDPDGKRLAIA-SNDGRLLL----LDTGEEEA-EAEPLEPVEPMV 431

Query: 310 -SPDSSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK- 365
            +P  S       +         V          + +       D  +SP GD + ++  
Sbjct: 432 KAPSGSTRADLHAATGAATPDSAVPVDEHPGLTELIRSVNGPVRDLAFSPDGDWLTWSHP 491

Query: 366 ---FSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYS 420
               S  +  +  +   G+   + V +   +   P ++  GR L F   +  D    +++
Sbjct: 492 GVGRSLRQIKLARISGPGAPVIVDVTNGRFEDENPVFTEDGRYLAFLSWRGFDPVYDVHT 551

Query: 421 IDLN---GRNETLINTPAYASDP 440
            DL+   G    L+   +    P
Sbjct: 552 GDLSFPLGCRPYLVPLSSATPSP 574



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 34/219 (15%), Positives = 64/219 (29%), Gaps = 42/219 (19%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ----QKVAYATYDDEDILRVYLMDTRID 247
            + +   DG   R LT           +SP+     Q +A ++++       +      D
Sbjct: 74  EIHLAPVDGGPARRLTYWGSTDARVCGWSPDPGDACQILAVSSHNQPFSYFSWAYSVPTD 133

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                             S  G+     +      DI   D+       L          
Sbjct: 134 G-----------------SPGGR-----LPWGPVSDIAVADIDGERRTLLLTG------- 164

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +P      ++  R G      +  +G   +R+  D +    +P++   G  IAF    
Sbjct: 165 --TPPHEPAAWKRYRGGAMG--RLWLHG---ERLLPDIDGHLANPMFV--GRRIAFLSDH 215

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                +   + DG+  R   +     A   S  G  +I+
Sbjct: 216 QGVGNLYSCRMDGTDLRRHTDHDAFYARNASSDGHRVIY 254



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 33/121 (27%), Gaps = 9/121 (7%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERL---TNTLF 302
              + I +    +    FS +G     S          I    +       +   TN  F
Sbjct: 462 GLTELIRSVNGPVRDLAFSPDGDWLTWSHPGVGRSLRQIKLARISGPGAPVIVDVTNGRF 521

Query: 303 INISASYSPDSSQIVFESDREGKEQLYV----MQSNGSDQKRISQDKEASYFDPVWSPQG 358
            + +  ++ D   + F S R       V    +      +  +     A+      SP G
Sbjct: 522 EDENPVFTEDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSPFALSPDG 581

Query: 359 D 359
            
Sbjct: 582 R 582


>gi|29830163|ref|NP_824797.1| protease [Streptomyces avermitilis MA-4680]
 gi|29607273|dbj|BAC71332.1| putative protease [Streptomyces avermitilis MA-4680]
          Length = 1101

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 60/198 (30%), Gaps = 40/198 (20%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDS 313
           N    +  P     G R   + + D    ++   L       R+T          +SPD 
Sbjct: 7   NVPGYLRFPHLH--GARLCFAAEDD----LWLAPLDGAGRAWRITVDRTKVGHPRFSPDG 60

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP----QGDLIAFTKFSGE 369
             I + S R    ++++   +G   +R++           WSP        I      GE
Sbjct: 61  RHIAYTSWRSLVPEIHLAPVDGGPGRRLTYWGSTDTRVCGWSPPDKEGHSDILAVASHGE 120

Query: 370 KFAIGV----MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            F+       +  DG     L          W P                S +   D++G
Sbjct: 121 PFSYFTWAYCVPTDGDPGGRLP---------WGP---------------VSDIAVADIDG 156

Query: 426 RNETLINTPAYASDPQ-W 442
             +TL+ T     +P  W
Sbjct: 157 ERKTLLLTGTPPHEPASW 174



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 67/194 (34%), Gaps = 32/194 (16%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++L          RI   R+ +  PRFS +G+    +  +    +I+   +      RLT
Sbjct: 30  LWLAPLDGAGRAWRITVDRTKVGHPRFSPDGRHIAYTSWRSLVPEIHLAPVDGGPGRRLT 89

Query: 299 NTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                +     +SP         D+EG   +  + S+G      +    A        P 
Sbjct: 90  YWGSTDTRVCGWSPP--------DKEGHSDILAVASHGEPFSYFTW---AYCVPTDGDPG 138

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G L       G    I V   DG ++ LL+  +    P          + R + G TG +
Sbjct: 139 GRL-----PWGPVSDIAVADIDGERKTLLLTGTPPHEPA--------SWKRYRGGATG-R 184

Query: 418 LY------SIDLNG 425
           L+        D++G
Sbjct: 185 LWLHGQRLLADIDG 198



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 72/245 (29%), Gaps = 22/245 (8%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +   DGA   +        +  PRFSP+ + +AY ++    +  ++L         +
Sbjct: 29  DLWLAPLDGAGRAWRITVDRTKVGHPRFSPDGRHIAYTSWR-SLVPEIHLAPVDGGPGRR 87

Query: 252 RIGNFRSMILAPRFSS---NGKRALISVQKDEAM-----DIYSVDLQSNATERLTNTLFI 303
                 +      +S     G   +++V             Y V    +   RL      
Sbjct: 88  LTYWGSTDTRVCGWSPPDKEGHSDILAVASHGEPFSYFTWAYCVPTDGDPGGRLPWGPVS 147

Query: 304 NIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ----- 357
           +I+ A    +   ++       +   +  +  G    R+    +    D           
Sbjct: 148 DIAVADIDGERKTLLLTGTPPHEPASWK-RYRGGATGRLWLHGQRLLADIDGHLDSPLFV 206

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  IAF         +     DGS  R   +     A   S  G  +++           
Sbjct: 207 GGRIAFLSDHEGIGNLYSCAYDGSDLRRHSDHDAFYARHASSDGTRVVY------QCAGD 260

Query: 418 LYSID 422
           L+ +D
Sbjct: 261 LWIVD 265



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 84/239 (35%), Gaps = 39/239 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAP 250
             +  RDG   R +T +    +  P    +  +VAY T  + +  +   +L     +R P
Sbjct: 319 YWLTHRDG-PARTITDTPGVRVRLPEMLGSGGQVAYITDAEGEDAVEIAHLPRVSGEREP 377

Query: 251 KRIGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           +R+ + R   +        G+R  I+   D  + + +V   +                  
Sbjct: 378 RRLASGRLGRVQELAADPRGERLAIA-SNDGRLLLITVSEAAGEEAGADAVESGE----- 431

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PD                        +   + +       D  +SP G  + ++   G 
Sbjct: 432 -PDG-----------------------EVTELIRSINGPVRDLAFSPDGAWLTWSH-PGI 466

Query: 370 KFAIGVMKKDGSQERLLVEDSN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             ++  +K    ++RL+V+ +N     + P ++  GR L F   +  D    +++ DL+
Sbjct: 467 GRSLRQIKMARIKDRLIVDVTNGRFEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLS 525



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 50/179 (27%), Gaps = 19/179 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-------------DILRVYLMDTRIDRA 249
            R L   R   + E    P  +++A A+ D                              
Sbjct: 377 PRRLASGRLGRVQELAADPRGERLAIASNDGRLLLITVSEAAGEEAGADAVESGEPDGEV 436

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISA 307
            + I +    +    FS +G     S          I    ++      +TN  F + + 
Sbjct: 437 TELIRSINGPVRDLAFSPDGAWLTWSHPGIGRSLRQIKMARIKDRLIVDVTNGRFEDENP 496

Query: 308 SYSPDSSQIVFESDREGKEQLYV----MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            ++ D   + F S R       V    +      +  +     A+      +P+G  +A
Sbjct: 497 VFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATLSPFALNPEGRPVA 555



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 4/137 (2%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            +D   + +     D    ++ VSE+       +++   + DG  +  L  S +  + + 
Sbjct: 392 AADPRGERLAIASNDGRLLLITVSEAAGEEAGADAVESGEPDGE-VTELIRSINGPVRDL 450

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   + ++       LR   M    DR    + N R     P F+ +G+       
Sbjct: 451 AFSPDGAWLTWSHPGIGRSLRQIKMARIKDRLIVDVTNGRFEDENPVFTRDGRYLAFLSW 510

Query: 278 KDEAMDIYSVDLQSNAT 294
           +         D+ +   
Sbjct: 511 RGFDP---VYDVHTGDL 524


>gi|254392591|ref|ZP_05007768.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197706255|gb|EDY52067.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 220

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
               + + D    +++  L      R+++          SPD + + + S R+G  +++V
Sbjct: 1   MIAFTAEDD----VWAAPLDGGRAWRVSSDDIPVDHPRISPDGTHVAWTSRRDGAPEVHV 56

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERLL 386
              +G    R++    A      W+P G+++A +              +  DG     L
Sbjct: 57  GPLDGGPTTRLTHWGSARTGVRGWTPGGEILAVSAQGQASLRRTLARAVPLDGGPAATL 115



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/106 (13%), Positives = 34/106 (32%), Gaps = 4/106 (3%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+ +    +  PR S +G     + ++D A +++   L    T RLT+          ++
Sbjct: 22  RVSSDDIPVDHPRISPDGTHVAWTSRRDGAPEVHVGPLDGGPTTRLTHWGSARTGVRGWT 81

Query: 311 PDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           P    +   +  +    +     +  +G     +            
Sbjct: 82  PGGEILAVSAQGQASLRRTLARAVPLDGGPAATLPYGPVGDVAHSA 127



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 9/126 (7%)

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           I F ++    + ++    +G    R+S D +     P  SP G  +A+T        + V
Sbjct: 2   IAFTAE----DDVWAAPLDGGRAWRVSSD-DIPVDHPRISPDGTHVAWTSRRDGAPEVHV 56

Query: 376 MKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLY-SIDLNGRN-ETLI 431
              DG     L    + +     W+P G  L  S +        L  ++ L+G    TL 
Sbjct: 57  GPLDGGPTTRLTHWGSARTGVRGWTPGGEILAVSAQGQASLRRTLARAVPLDGGPAATLP 116

Query: 432 NTPAYA 437
             P   
Sbjct: 117 YGPVGD 122



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 41/121 (33%), Gaps = 7/121 (5%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +     DG    +   S D  +  PR SP+   VA+ +  D        +         
Sbjct: 9   DVWAAPLDGGRA-WRVSSDDIPVDHPRISPDGTHVAWTSRRDGAPE--VHVGPLDGGPTT 65

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQKDEAMD---IYSVDLQSNATERLTNTLFINISA 307
           R+ ++ S     R ++  G+   +S Q   ++      +V L       L      +++ 
Sbjct: 66  RLTHWGSARTGVRGWTPGGEILAVSAQGQASLRRTLARAVPLDGGPAATLPYGPVGDVAH 125

Query: 308 S 308
           S
Sbjct: 126 S 126


>gi|158339145|ref|YP_001520322.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158309386|gb|ABW31003.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1169

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 91/241 (37%), Gaps = 23/241 (9%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG    S+ + +        +TP     ++   FSP+ Q +   + D     ++ L D
Sbjct: 907  VASGGEDGSVQLWEPGTGRQFTMTPRHSGPIWAIAFSPDGQTLVSGSADH----QIRLWD 962

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLF 302
                   +      S +L+  FS N    LIS   D+ + ++  D+++      LT    
Sbjct: 963  VVNHHTLRTFTGHDSWVLSITFSDN---ILISGSADQTIKVW--DMRTGDCCHTLTGHTG 1017

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S S + D   +   S+      + +   + +D  +I +   +       SP G  IA
Sbjct: 1018 SVWSVSAARD--ILATASE---DRMIRLWHLSTADCYQILKGHSSLALTVQISPDGQYIA 1072

Query: 363  FTKFSGEKFAIGVMKKDGSQ-ERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                      + +      Q  ++L     ++ +  ++P  + L+ S  +DG    +L+S
Sbjct: 1073 SGSADNT---VRLWDARTGQCLQILTGHTHSVWSVAFTPDSQYLV-SGGQDGT--LRLWS 1126

Query: 421  I 421
            +
Sbjct: 1127 L 1127



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 95/262 (36%), Gaps = 26/262 (9%)

Query: 150 SWRKIAHTISDDIYQSITGEKGD-----FNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
           +  +++   +D      T   GD     F+    +V+ +   GI +  +  ++ DG  + 
Sbjct: 543 NLHRVSFKNTDIANSVFTQTFGDICDATFSPNGEWVATAHTDGIPR--IWRVN-DGK-LL 598

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +   +  + ++   FSPN Q +A  ++D      + L D    +  + +   +  I +  
Sbjct: 599 FSCQAHPETIWSIAFSPNGQTLASGSFDQ----TISLWDLEQGQGQQTLCGHQDRIWSIA 654

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           FS  G+  + S   D  + ++  D+ +    R LT       + +Y P+   I       
Sbjct: 655 FSPKGQTLV-SGSNDCTLRLW--DVTTGTCIRILTGHTDGVTAVAYHPEGEWIA----SG 707

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ- 382
             +Q   +    S                  SP G  +A    S +   I + +    + 
Sbjct: 708 SADQTVRLWHPTSRLLATFTGHSLPITCIAVSPDGQYLA----SSDAQTIRLWQVSTQEC 763

Query: 383 ERLLVEDSNLQAPTWSPSGRSL 404
             ++   +++ +  +S  G  L
Sbjct: 764 IHVIEALTSVWSMAFSADGEIL 785



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 68/208 (32%), Gaps = 15/208 (7%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            +  + +D   +  L    + + +    SP+ Q VA  + D      V L D       +R
Sbjct: 835  VWQLQQDLQRLCTLQGYTNGV-WSVAISPDGQTVASGSTDH----VVRLWDLNQQHCRQR 889

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
              + +S      FS +G + + S  +D ++ ++                    + ++SPD
Sbjct: 890  --HLQSSARQVTFSPDG-QLVASGGEDGSVQLWE-PGTGRQFTMTPRHSGPIWAIAFSPD 945

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               +V  S      Q+ +         R     ++      +S     I  +  + +   
Sbjct: 946  GQTLVSGS---ADHQIRLWDVVNHHTLRTFTGHDSWVLSITFSDN---ILISGSADQTIK 999

Query: 373  IGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            +  M+       L     ++ + + +  
Sbjct: 1000 VWDMRTGDCCHTLTGHTGSVWSVSAARD 1027



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 72/221 (32%), Gaps = 16/221 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG    ++ + D +    +         ++   FSP  Q +   + D      + L
Sbjct: 618 QTLASGSFDQTISLWDLEQGQGQQTLCGHQDRIWSIAFSPKGQTLVSGSND----CTLRL 673

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D       + +      + A  +   G+    S   D+ + ++     S      T   
Sbjct: 674 WDVTTGTCIRILTGHTDGVTAVAYHPEGEWIA-SGSADQTVRLW--HPTSRLLATFTGHS 730

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 + SPD   +   SD    + + + Q +  +   +  +   S +   +S  G+++
Sbjct: 731 LPITCIAVSPDGQYLA-SSD---AQTIRLWQVSTQECIHVI-EALTSVWSMAFSADGEIL 785

Query: 362 AFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSG 401
                   +F        G   +     D  + A  +S +G
Sbjct: 786 ---GAGDRQFLKCWRVPTGELLQSQATYDRQIWAVDFSQNG 823


>gi|153874789|ref|ZP_02002872.1| WD-40 repeat protein [Beggiatoa sp. PS]
 gi|152068748|gb|EDN67129.1| WD-40 repeat protein [Beggiatoa sp. PS]
          Length = 293

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 66/187 (35%), Gaps = 19/187 (10%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            D ++    FSP+ + V  A++D        + ++        + +   +  A  FS +G
Sbjct: 119 HDHVVEHAAFSPDGKLVVTASWDG----TARVWNSESGEEISELKHHNGVSYA-TFSPDG 173

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTN-------TLFINISASYSPDSSQIVFESDR 322
              +++   D+   I+ V L+       TN          +   A +S D  ++V  S  
Sbjct: 174 -SLIVTTSWDKTAHIWEVPLKRKNATNATNAINALIGHQGVVNYAMFSSDGQRLVTASS- 231

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                  V +        I +    +     +SP G+ +    +        V + +  +
Sbjct: 232 --DNTARVWEVETGQPLAILKGHTNNVGYAAFSPDGEKVVTASWDNTA---RVWEANTGE 286

Query: 383 ERLLVED 389
             +L++D
Sbjct: 287 LLMLLKD 293



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 92/257 (35%), Gaps = 26/257 (10%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            + T E   F++    +  +   G  +    + D +   +  +       +    F+ + 
Sbjct: 36  HTSTVESASFSTDDQQIITASQDGTAR----IWDAETGQLINILKGHQGAINMVTFNTSG 91

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            ++  A+ D  +  R++  +T  + A   I     ++    FS +GK  +++   D    
Sbjct: 92  TQIVTASQD--NTARLWNAETGEELA---ILKHDHVVEHAAFSPDGK-LVVTASWDGTAR 145

Query: 284 IYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++  + +S      L +   ++  A++SPD S IV  S  +    ++ +     +    +
Sbjct: 146 VW--NSESGEEISELKHHNGVSY-ATFSPDGSLIVTTS-WDKTAHIWEVPLKRKNATNAT 201

Query: 343 Q------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQA 394
                    +      ++S  G  +             V + +  Q   ++    +N+  
Sbjct: 202 NAINALIGHQGVVNYAMFSSDGQRLVTASSDNTA---RVWEVETGQPLAILKGHTNNVGY 258

Query: 395 PTWSPSGRSLIFSRKKD 411
             +SP G  ++ +   +
Sbjct: 259 AAFSPDGEKVVTASWDN 275



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 59/149 (39%), Gaps = 9/149 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            F+S+G + + +   D    I+ +D Q+    +L        SAS+S D  QI+  + ++
Sbjct: 2   AFNSSGTQLV-TASDDGTARIWDIDFQT-ELTQLKEHTSTVESASFSTDDQQII-TASQD 58

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  +++   +       I +  + +     ++  G  I             +   +  +E
Sbjct: 59  GTARIW--DAETGQLINILKGHQGAINMVTFNTSGTQIVTASQDNTA---RLWNAETGEE 113

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             +L  D  ++   +SP G+ ++ +    
Sbjct: 114 LAILKHDHVVEHAAFSPDGKLVVTASWDG 142


>gi|145628740|ref|ZP_01784540.1| translocation protein TolB precursor [Haemophilus influenzae
           22.1-21]
 gi|144979210|gb|EDJ88896.1| translocation protein TolB precursor [Haemophilus influenzae
           22.1-21]
          Length = 109

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 38/117 (32%), Gaps = 11/117 (9%)

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M ++G     +             S  G  +           +           +L    
Sbjct: 1   MDASGGSATVV-----GGRGSAQISADGKTLVMI---NGNNNVVKQDLTTGVSEVLSTSF 52

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGFM 446
             ++P+ SP+G  +I+S  +    G  L  +  +GR + +L  +      P W  ++
Sbjct: 53  LGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRFKASLPGSDGQVKFPAWSPYL 107



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 46/99 (46%), Gaps = 5/99 (5%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               + + S++GK  ++    +   ++   DL +  +E L +T F+  S S SP+   I+
Sbjct: 12  GGRGSAQISADGKTLVMI---NGNNNVVKQDLTTGVSEVL-STSFLGESPSLSPNGIMII 67

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + S +   + L ++ ++G  +  +    +     P WSP
Sbjct: 68  YSSTQGLGKVLQLVSADGRFKASL-PGSDGQVKFPAWSP 105



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 25/93 (26%), Gaps = 6/93 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S + + +            V   D     +     +F     +P  S NG   + S  +
Sbjct: 19  ISADGKTLV----MINGNNNVVKQDLTTGVSEVLSTSFLGE--SPSLSPNGIMIIYSSTQ 72

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                +  V         L  +       ++SP
Sbjct: 73  GLGKVLQLVSADGRFKASLPGSDGQVKFPAWSP 105


>gi|284051799|ref|ZP_06382009.1| WD-40 repeat-containing serine/threonin protein kinase [Arthrospira
           platensis str. Paraca]
          Length = 607

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 88/254 (34%), Gaps = 22/254 (8%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG   N++ + + + G NI  L      IL    FS +  ++A  T    +  R+   + 
Sbjct: 345 SGSRDNTIKLWNTQTGENISTLAGDGSAILSV-NFSNDGIELASGT----EFWRILEWNL 399

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFI 303
           +       +    + IL  + S N +    S   D  + ++  D ++       T     
Sbjct: 400 QTRELYLPL-EHSAPILTVQISPNNRNIA-SGSADNTVRVW--DRRTGQVLYNHTEHSET 455

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               ++SP+   +V  S   G   ++V+     + +   Q           +P G+ I  
Sbjct: 456 VYGVAFSPNGRWLVTGS---GDRTIHVIDLEMRELRHRLQGHNGEVRTVAITPDGENIIS 512

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    I V      +E + +     +  +   SP    +  S +   D   K++++
Sbjct: 513 GSSDNT---IKVWDLQTGEETITLTGHQGEVLSVAVSPDATQIASSSR---DRTVKIWNL 566

Query: 422 DLNGRNETLINTPA 435
                  TL + PA
Sbjct: 567 STGDLLNTLTDIPA 580



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 71/181 (39%), Gaps = 11/181 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++ SG   N++ V DR    + Y      + ++   FSPN + +   + D      +++
Sbjct: 424 RNIASGSADNTVRVWDRRTGQVLYNHTEHSETVYGVAFSPNGRWLVTGSGDR----TIHV 479

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
           +D  +     R+      +     + +G+   IS   D  + ++  DLQ+      LT  
Sbjct: 480 IDLEMRELRHRLQGHNGEVRTVAITPDGENI-ISGSSDNTIKVW--DLQTGEETITLTGH 536

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +S + SPD++QI   S R+   +++    +  D      D  A      +     L
Sbjct: 537 QGEVLSVAVSPDATQIA-SSSRDRTVKIW--NLSTGDLLNTLTDIPAVINSVFFVDDETL 593

Query: 361 I 361
           I
Sbjct: 594 I 594


>gi|94967441|ref|YP_589489.1| peptidase S9, prolyl oligopeptidase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94549491|gb|ABF39415.1| peptidase S9, prolyl oligopeptidase [Candidatus Koribacter
           versatilis Ellin345]
          Length = 712

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 26/127 (20%)

Query: 266 SSNGKRALISVQKDEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + +G   + + ++ +        D++       +   LT T   + S  +SPD   I F 
Sbjct: 44  APDGNAVVFATERADWDNDRFREDLWLYRTNGGSLIPLTRT-GHDSSPQWSPDGQWIAFL 102

Query: 320 SDRE------------------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           SDR                   G   +YV+ + G +   +++ +E       W+P    I
Sbjct: 103 SDRATDSDSTKDDDDDSKDKSKGVSHVYVISATGGEAFAVTRGEE-EIHAFAWAPDSKGI 161

Query: 362 AFTKFSG 368
            F   + 
Sbjct: 162 YFATRTP 168



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 29/126 (23%)

Query: 349 YFDPVWSPQGDLIAFTK----FSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           Y D   +P G+ + F      +  ++F   + + + +G     L    +  +P WSP G+
Sbjct: 38  YRDVHIAPDGNAVVFATERADWDNDRFREDLWLYRTNGGSLIPLTRTGHDSSPQWSPDGQ 97

Query: 403 SLIFSRKKD----------------GDTGSKLYSIDLNG-------RNETLINTPAYASD 439
            + F   +                     S +Y I   G       R E  I+  A+A D
Sbjct: 98  WIAFLSDRATDSDSTKDDDDDSKDKSKGVSHVYVISATGGEAFAVTRGEEEIHAFAWAPD 157

Query: 440 PQWVGF 445
            + + F
Sbjct: 158 SKGIYF 163



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 36/122 (29%), Gaps = 21/122 (17%)

Query: 219 FSPNQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            +P+   V +AT     D D  R  L   R +              +P++S +G+     
Sbjct: 43  IAPDGNAVVFATERADWDNDRFREDLWLYRTNGGSLIPLTRTGHDSSPQWSPDGQWIAFL 102

Query: 276 VQK------------------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             +                       +Y +         +T       + +++PDS  I 
Sbjct: 103 SDRATDSDSTKDDDDDSKDKSKGVSHVYVISATGGEAFAVTRGEEEIHAFAWAPDSKGIY 162

Query: 318 FE 319
           F 
Sbjct: 163 FA 164



 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 46/334 (13%), Positives = 105/334 (31%), Gaps = 97/334 (29%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
             + +Y        D N+ ++F +E     +   +  L +   +G ++  LT +      
Sbjct: 32  FFNAVYYRDVHIAPDGNA-VVFATERADWDNDRFREDLWLYRTNGGSLIPLTRTGH--DS 88

Query: 216 EPRFSPNQQKVAYATYD-----------------DEDILRVYLMDTRIDRAPKRIGNFRS 258
            P++SP+ Q +A+ +                    + +  VY++ +        +     
Sbjct: 89  SPQWSPDGQWIAFLSDRATDSDSTKDDDDDSKDKSKGVSHVYVI-SATGGEAFAVTRGEE 147

Query: 259 MILAPRFSSNGKRALISVQ-------KDEAMDIYSVDLQSNATER--------------- 296
            I A  ++ + K    + +       KD   + +   +Q  A+ER               
Sbjct: 148 EIHAFAWAPDSKGIYFATRTPWSKEKKDAYKEAWKDTVQYRASERGDVIARIALADVMAR 207

Query: 297 --------------------------------LTNTLFINISASYSPDSSQIVF----ES 320
                                           +T+T F     + S D++++ F     S
Sbjct: 208 HFSLTSEPKEKKKKDSDKEDKPETAETPGSALITSTPFRVRQLAVSSDNARLAFLTGSIS 267

Query: 321 DRE---GKEQLYVMQSNGS---DQKRISQDKEASYFDPVWSPQGDLIAF---------TK 365
           +RE      ++Y  +  G+     KR++ +     F+  W+     + F         TK
Sbjct: 268 EREESAADFEIYAAEIAGTVPEQAKRLT-NNSGIEFEIRWAADNHHLFFQNSEGSVESTK 326

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           ++  +  I  +    +Q              ++P
Sbjct: 327 YADTQNRIYWIDATTAQIERWAATYKGHVSEYAP 360



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 27/59 (45%), Gaps = 10/59 (16%)

Query: 398 SPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLIN------TPAYASDPQWVGFM 446
           +P G +++F+ ++    +      L+    NG +   +       +P ++ D QW+ F+
Sbjct: 44  APDGNAVVFATERADWDNDRFREDLWLYRTNGGSLIPLTRTGHDSSPQWSPDGQWIAFL 102


>gi|322703494|gb|EFY95102.1| Heterokaryon incompatibility protein R [Metarhizium anisopliae ARSEF
            23]
          Length = 1634

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 94/295 (31%), Gaps = 28/295 (9%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     R+WD     +I  +K   S      +A + SD +        G   S++  
Sbjct: 1082 ASGSDDATIRVWDALTGNEI--QKLSRSSDHVLSLAFS-SDQVLSLAFSRDG---SQLAV 1135

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-----E 234
             S + V  +    +         +  +       +    FSP    +A  + D       
Sbjct: 1136 ASRNCVIDVWNYKM-------EQLTQVLRGHTDFVTSVAFSPQGPYLASCSQDFTTRLWY 1188

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            D  +       +++      ++   I A   S +G+    S   D+ + ++  D ++   
Sbjct: 1189 DEPKEQANVHEVEKEADSFLSYAHRICALTVSLDGRCVA-SAMTDDTIHLW--DGETGKR 1245

Query: 295  ERLTNTLFINI---SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
             R    +  +    S ++S D   +   S+      + V        +R     EA    
Sbjct: 1246 LRNAERMGHDDQVNSIAFSHDGQSLASASN---DRTVRVYHVPSGKLRRSFSGHEAPVRR 1302

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLI 405
             V+ P G  IA            +  ++G   ++L +      A  +SP G+ L 
Sbjct: 1303 AVFGPDGQFIASASNDSTVRVWDLESRNGDPPQILRQPKGYASAVAFSPDGQYLA 1357



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 45/254 (17%), Positives = 78/254 (30%), Gaps = 25/254 (9%)

Query: 170  KGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             GD    I F ++     SG    ++ + D      ++        +F   FS     VA
Sbjct: 896  HGDCVQCIAFSADGTQLASGSDDRTVRIWDVQAGTAQHTLRGHTHGIFCLDFSRTGL-VA 954

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                D      V L +    R    +      + A  F+ NGK+ + +  +   +   SV
Sbjct: 955  SGAADS----TVRLWNAATGRPVGTLSGHWGWVDAVSFAPNGKKLVAASGQSLYVWDLSV 1010

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            D +    +R         S   SPD     F       +++ +         R     E 
Sbjct: 1011 DNKPELWKRFEAHGGSISSVVLSPDGR---FLVSGGEDKKVNIWDGQTYALLRTLNGHEE 1067

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQ-----------AP 395
            +     +SP G  IA          I V     G++ + L   S+             + 
Sbjct: 1068 AINCVAFSPIGHHIASGSDDAT---IRVWDALTGNEIQKLSRSSDHVLSLAFSSDQVLSL 1124

Query: 396  TWSPSGRSLIFSRK 409
             +S  G  L  + +
Sbjct: 1125 AFSRDGSQLAVASR 1138



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 68/205 (33%), Gaps = 24/205 (11%)

Query: 198  RDGANIRYLTP----SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             DG   + L        D  +    FS + Q +A A+ D      V +      +  +  
Sbjct: 1238 WDGETGKRLRNAERMGHDDQVNSIAFSHDGQSLASASNDR----TVRVYHVPSGKLRRSF 1293

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPD 312
                + +    F  +G+    S   D  + ++ ++ ++    + L        + ++SPD
Sbjct: 1294 SGHEAPVRRAVFGPDGQFIA-SASNDSTVRVWDLESRNGDPPQILRQPKGYASAVAFSPD 1352

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKF 371
               +       G   + V +          ++K  +  +P  +SP         F  +  
Sbjct: 1353 GQYLA-----SGGVTVQVWERESGSST--WREKTITDSNPHYFSP---FFYLVLFYPDSH 1402

Query: 372  AIGVMKKDGSQERLL-VEDSNLQAP 395
             I +   DG + R   V+    + P
Sbjct: 1403 RILL--SDGHELRTWDVQTQQFEGP 1425



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 70/198 (35%), Gaps = 37/198 (18%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
              LWD +  K++          +  ++ H   D +        G          +S+ S 
Sbjct: 1235 IHLWDGETGKRL---------RNAERMGH--DDQVNSIAFSHDG----------QSLASA 1273

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                ++ V       +R      +  +    F P+ Q +A A+ D    +RV+ +++R  
Sbjct: 1274 SNDRTVRVYHVPSGKLRRSFSGHEAPVRRAVFGPDGQFIASASND--STVRVWDLESRNG 1331

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA----TERLTNTLFI 303
              P+ +   +    A  FS +G+           + +   + +S +     + +T++   
Sbjct: 1332 DPPQILRQPKGYASAVAFSPDGQYLA-----SGGVTVQVWERESGSSTWREKTITDSNPH 1386

Query: 304  NISAS-----YSPDSSQI 316
              S       + PDS +I
Sbjct: 1387 YFSPFFYLVLFYPDSHRI 1404



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 39/119 (32%), Gaps = 15/119 (12%)

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            ++S D +Q+   SD      + +        +   +      F   +S  G         
Sbjct: 904  AFSADGTQLASGSD---DRTVRIWDVQAGTAQHTLRGHTHGIFCLDFSRTG----LVASG 956

Query: 368  GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + +      +    +      + A +++P+G+ L+ +       G  LY  DL+
Sbjct: 957  AADSTVRLWNAATGRPVGTLSGHWGWVDAVSFAPNGKKLVAAS------GQSLYVWDLS 1009


>gi|284045577|ref|YP_003395917.1| hypothetical protein Cwoe_4127 [Conexibacter woesei DSM 14684]
 gi|283949798|gb|ADB52542.1| YD repeat protein [Conexibacter woesei DSM 14684]
          Length = 2318

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 86/249 (34%), Gaps = 33/249 (13%)

Query: 192  SLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYD-------DEDILRVYLMD 243
             L     DG + R  LT S    L +   SP+   VA  T         +    R+ L  
Sbjct: 1116 ELWTAKLDGTDPRKVLTVSYADDLKDIAVSPDGDTVAMITSRGIELVGINGRGRRLLLNA 1175

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTL 301
                 +    G+      +  FS  G    I+     D A  IYS+D+ +    RL    
Sbjct: 1176 PSAGGS----GDGPQSPSSVAFSPTGDGLAIAAYSPVDFATGIYSLDIATGTALRLDAGW 1231

Query: 302  FINIS------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK----EASYFD 351
              ++        SYSPD  ++ + +    +  +    +NG+ ++ +        +     
Sbjct: 1232 TPDVPYTDRDLPSYSPDGGRLTYLARNGSQTAIVTAAANGTGERAVEIGGDVQQDTVTSK 1291

Query: 352  PVWSPQGDLIAFTKFSGE---KFAIGVMKKDGSQER--LLVEDSNLQ----APTWSPSGR 402
            P +S    +I F+         +AI  +          L  +  N      AP+W+  G 
Sbjct: 1292 PRFSEDNSMIVFSGLPLGDYCGYAIHGIDIATQTLTPNLPSQTRNCNLSFTAPSWTGPGS 1351

Query: 403  SLIFSRKKD 411
            +++ +   D
Sbjct: 1352 TVLTAYSYD 1360



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 92/259 (35%), Gaps = 36/259 (13%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRS 258
             + +++  + D     P            T D    LR+ ++            +   R 
Sbjct: 1041 WSAQWMRCNPDGGDCRPIGGATGSTYLVTTEDLGQRLRLRVVYDGGQNLDDSGTSAIVRG 1100

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINI-SASYSPDSSQI 316
             +LAP      +R  + +   ++ ++++  L      + LT +   ++   + SPD   +
Sbjct: 1101 ALLAP------RRFALVL---DSEELWTAKLDGTDPRKVLTVSYADDLKDIAVSPDGDTV 1151

Query: 317  VFESDREGKEQLYVMQSNGSDQKRI--------SQDKEASYFDPVWSPQGDLIAFTKFSG 368
               + R     + ++  NG  ++ +        S D   S     +SP GD +A   +S 
Sbjct: 1152 AMITSRG----IELVGINGRGRRLLLNAPSAGGSGDGPQSPSSVAFSPTGDGLAIAAYSP 1207

Query: 369  EKFAIGVMKKD---GSQERL---LVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
              FA G+   D   G+  RL      D   ++   P++SP G  L +  +    T   + 
Sbjct: 1208 VDFATGIYSLDIATGTALRLDAGWTPDVPYTDRDLPSYSPDGGRLTYLARNGSQTA--IV 1265

Query: 420  SIDLNGRNETLINTPAYAS 438
            +   NG  E  +       
Sbjct: 1266 TAAANGTGERAVEIGGDVQ 1284


>gi|320103196|ref|YP_004178787.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Isosphaera pallida ATCC 43644]
 gi|319750478|gb|ADV62238.1| peptidase S9B dipeptidylpeptidase IV domain protein [Isosphaera
           pallida ATCC 43644]
          Length = 1212

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 81/229 (35%), Gaps = 46/229 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-------------------S 258
            +SP+ + +A+  +D+  +  + ++D        R    R                    
Sbjct: 676 WWSPDSRHLAFIRFDETPVPPLPVLDAISFTPSPRPAYPRVGEPNPPVKLGIVAIDQEDG 735

Query: 259 MILAPR------------------FSSNGKRA-LISVQKDEAM-DIYSVDLQS--NATER 296
              +P                   +  +G+      + +++   D+Y+++L+       R
Sbjct: 736 QQASPVFFDPPDNPDGSHLIVRAYWRPDGQEVYAYVLDRNQTWLDVYAINLKGEARKLFR 795

Query: 297 LTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            T   ++    +  +  D S  +F S+R+G   LY    +G+   ++++   A +     
Sbjct: 796 ETTGAWVETWEAPIHLKDGS-FLFLSERDGYRHLYRYSRDGALLGQVTRGDWAIHRLLRV 854

Query: 355 SPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
             + D I FT    E    A+   + DGS  + L     +   + +P G
Sbjct: 855 DEENDRILFTSRKDEPVGMALYSTRMDGSNLKRLTPGPGVHLVSLAPEG 903


>gi|327541362|gb|EGF27903.1| tolB protein [Rhodopirellula baltica WH47]
          Length = 333

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 57/304 (18%), Positives = 97/304 (31%), Gaps = 51/304 (16%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQIL-----FEPRFSPNQQKVAYATY-----DDE 234
            +   +  L V   DG  IR L   +           P  SP+ ++VAY  +     D +
Sbjct: 24  PTKPNRLILHVCKMDGTPIRPLVADKAIRHDLDRQGTPNVSPDGKRVAYDAWSTTPTDPD 83

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-----VQKDE--AMDIYSV 287
              RV + D         I  +      P F+ + KR ++S      + D      I+ V
Sbjct: 84  RGPRVCVCDLDGKNFIDVIDGY-----MPSFAPDNKRLVVSRPAKHAKADGAKGQSIWIV 138

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKE------QLY---------V 330
           +  +   + + +         +S D + I+F+   D  G        ++Y         +
Sbjct: 139 NCDTKEKKLIADQGAW--GGRWSADGATILFQGGVDDNGDPVPKSCLRVYDVAAEKPSLL 196

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
               GS  + IS     S  D   +  G LIA         A  +M  D   + +++   
Sbjct: 197 FPPEGSPFQEISYHFAWSKSDRRLAIGGRLIAGLGEGAPSSATVIMNADKGPDSVIIMLP 256

Query: 391 NLQAPT--------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYASDP 440
                         W P G+S++ +   D        S D      T    P      DP
Sbjct: 257 PANGARVFDGLSLDWHPDGKSILSTGMLDNRFVPVGLSTDGTASEITFPGIPDSVNVRDP 316

Query: 441 QWVG 444
            +  
Sbjct: 317 AYSP 320



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 83/258 (32%), Gaps = 40/258 (15%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA----TYDDEDI 236
           S +         +CV D DG N   +        + P F+P+ +++  +        +  
Sbjct: 76  STTPTDPDRGPRVCVCDLDGKNFIDVIDG-----YMPSFAPDNKRLVVSRPAKHAKADGA 130

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD------IYSVDLQ 290
               +     D   K++   +      R+S++G   L     D+  D      +   D+ 
Sbjct: 131 KGQSIWIVNCDTKEKKLIADQGAWGG-RWSADGATILFQGGVDDNGDPVPKSCLRVYDVA 189

Query: 291 SNATERLTNTLF-----INISASYSPDSSQIVFESDR------EGKE--QLYVMQSNGSD 337
           +     L          I+   ++S    ++     R      EG       +M ++   
Sbjct: 190 AEKPSLLFPPEGSPFQEISYHFAWSKSDRRLA-IGGRLIAGLGEGAPSSATVIMNADKGP 248

Query: 338 QKRISQDKEASYFDP------VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---- 387
              I     A+           W P G  I  T     +F    +  DG+   +      
Sbjct: 249 DSVIIMLPPANGARVFDGLSLDWHPDGKSILSTGMLDNRFVPVGLSTDGTASEITFPGIP 308

Query: 388 EDSNLQAPTWSPSGRSLI 405
           +  N++ P +SP G+ LI
Sbjct: 309 DSVNVRDPAYSPDGKHLI 326



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 62/185 (33%), Gaps = 26/185 (14%)

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP-----------ASW 151
           W++ GA +L  G V   G    +   R++DV   K  +      SP            S 
Sbjct: 158 WSADGATILFQGGVDDNGDPVPKSCLRVYDVAAEKPSLLFPPEGSPFQEISYHFAWSKSD 217

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R++A      I   +    G+       V  +   G     + +   +GA +       D
Sbjct: 218 RRLA------IGGRLIAGLGEGAPSSATVIMNADKGPDSVIIMLPPANGARVF------D 265

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGK 270
            +  +  + P+ + +      D   + V L            G   S+ +  P +S +GK
Sbjct: 266 GLSLD--WHPDGKSILSTGMLDNRFVPVGLSTDGTASEITFPGIPDSVNVRDPAYSPDGK 323

Query: 271 RALIS 275
             + S
Sbjct: 324 HLIAS 328


>gi|153000470|ref|YP_001366151.1| peptidase S9 prolyl oligopeptidase [Shewanella baltica OS185]
 gi|160875067|ref|YP_001554383.1| peptidase S9 prolyl oligopeptidase [Shewanella baltica OS195]
 gi|304411313|ref|ZP_07392927.1| WD40-like beta Propeller containing protein [Shewanella baltica
           OS183]
 gi|307305365|ref|ZP_07585113.1| WD40 domain protein beta Propeller [Shewanella baltica BA175]
 gi|151365088|gb|ABS08088.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella baltica OS185]
 gi|160860589|gb|ABX49123.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella baltica OS195]
 gi|304350168|gb|EFM14572.1| WD40-like beta Propeller containing protein [Shewanella baltica
           OS183]
 gi|306911668|gb|EFN42093.1| WD40 domain protein beta Propeller [Shewanella baltica BA175]
 gi|315267299|gb|ADT94152.1| WD40-like beta Propeller containing protein [Shewanella baltica
           OS678]
          Length = 683

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 84/291 (28%), Gaps = 67/291 (23%)

Query: 218 RFSPNQQKVAY----ATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             S +  K+ Y         E    +YL+D T     P ++ +         F+++ K  
Sbjct: 42  TVSHDGTKLVYGLKTVNDKGEGSSDLYLLDLTDTKAKPLQLTSAAGTEHDVSFATDDKSI 101

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------------- 317
                +  +  ++ + L      ++++          S D  Q+V               
Sbjct: 102 YFLAGRSGSSQLFQLPLTGGEAVQVSDLPLDIDGYKLSNDGKQVVLSMRVFPECKDLACS 161

Query: 318 ---FESDREGK----------------------EQLYVMQSNGSDQKRISQDKEASYFDP 352
              F ++ E K                        L+V   NG    ++    +    + 
Sbjct: 162 KDKFTAESERKSTGREYKQLMVRHWDTWEDHARSHLFVGAVNGEKLTKVVDVTQGLDTET 221

Query: 353 -----------VWSPQGDLIAFTKFSG-------EKFAIGVMKKDGSQERLLVEDSNLQA 394
                       ++P G  + ++  +          + +  +   G     L +D+    
Sbjct: 222 PPKPFSGMEEVTFTPDGKFVVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWD 281

Query: 395 --PTWSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNETLINTPAYASDPQ 441
             PT+S  GR + +   K     +  Y I L      +T    P +   P 
Sbjct: 282 AQPTFSSDGRYMAYLAMKKPGFEADRYGIMLRDTTTGQTKEVAPLWDRSPS 332



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 62/184 (33%), Gaps = 8/184 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G F            +      L  +   G     LT        +P FS + 
Sbjct: 231 EVTFTPDGKFVVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPTFSSDG 290

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D   + L DT   +  +    +     +  F+ + +   ++ Q  
Sbjct: 291 RYMAYLAMKKPGFEADRYGIMLRDTTTGQTKEVAPLWDRSPSSLMFAPDNRTLYVTAQDI 350

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
             + I+ V+ Q      +        ++  +  + +++F+S    +   LY + ++G   
Sbjct: 351 GQVSIFQVNTQFGDVRSI---YSDGTNSLIAVTNDELIFDSKTLVEPGDLYSITTDGQGL 407

Query: 339 KRIS 342
           KR++
Sbjct: 408 KRLT 411



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 111/322 (34%), Gaps = 38/322 (11%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           LV G      K     +  L D+ D K     +  S+  +   ++    D     + G  
Sbjct: 50  LVYGLKTVNDKGEGSSDLYLLDLTDTKAKP-LQLTSAAGTEHDVSFATDDKSIYFLAGRS 108

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA--- 227
           G  +S++  +  +    +  + L  +D DG     L+    Q++   R  P  + +A   
Sbjct: 109 G--SSQLFQLPLTGGEAVQVSDL-PLDIDGY---KLSNDGKQVVLSMRVFPECKDLACSK 162

Query: 228 --YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             +    +            +        + RS +       NG++    V   + +D  
Sbjct: 163 DKFTAESERKSTGREYKQLMVRHWDTWEDHARSHLFVGAV--NGEKLTKVVDVTQGLDTE 220

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQ 338
           +     +  E +T          ++PD   +V+ +    K+Q +    +       G   
Sbjct: 221 TPPKPFSGMEEVT----------FTPDGKFVVYSAKAPSKDQAWTTNYDLWQVPVTGGTA 270

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL-LVEDSNLQA 394
             +++D  A    P +S  G  +A+       F     G+M +D +  +   V     ++
Sbjct: 271 TNLTKDNLAWDAQPTFSSDGRYMAYLAMKKPGFEADRYGIMLRDTTTGQTKEVAPLWDRS 330

Query: 395 PT---WSPSGRSLIFSRKKDGD 413
           P+   ++P  R+L  + +  G 
Sbjct: 331 PSSLMFAPDNRTLYVTAQDIGQ 352


>gi|326477217|gb|EGE01227.1| protein kinase subdomain-containing protein [Trichophyton equinum CBS
            127.97]
          Length = 1538

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 97/325 (29%), Gaps = 64/325 (19%)

Query: 149  ASWRKIAHTISDDIYQ----------SITGEKGDFNSRILFVSESV--VSGIIKNSLCVM 196
            +  R +A   SD   +           +     D+ + I F   SV   SG    ++ + 
Sbjct: 795  SGQRHLASASSDRTIRIWDVDDGRCIKVLKGHSDWVNSIAFKQNSVYLASGSSDKTVRIW 854

Query: 197  DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
            D   +    +       +    FS N + +A A  D    +R++  D    +  + + + 
Sbjct: 855  DVATSTCVRVLQGHTNWVNSVAFSHNGKYLASAANDAS--IRIWDSD---GKCEQTLRSH 909

Query: 257  RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               + A  FS + +R  IS   D  + ++ + +    T  +        S ++S D   +
Sbjct: 910  SWTVTALAFSPDDQRL-ISGSSDRTIKVWDMSIIGKNTRVVRAHDKWVDSLTFSRDGKYV 968

Query: 317  V---------------------------------FESDR-----EGKEQLYVMQSNGSDQ 338
                                              F SD         +   +      + 
Sbjct: 969  ASISDDMTLMTWSATTGEYMHTLGGHKDILNGLCFSSDNHLASAASDQTARIWDIFTGEC 1028

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PT 396
            K   +  E S     +SP     +    S     + V + D      L E          
Sbjct: 1029 KETLEGHEDSVNSVDFSP---DDSLLVSSSSDHTVRVWEVDTGMCIQLFEGHTDSVGRAV 1085

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSI 421
            +S  G+ +  S +   D   +++S 
Sbjct: 1086 FSTDGQYIASSSR---DKSVRIWST 1107



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 82/274 (29%), Gaps = 48/274 (17%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     S+ + D DG        S    +    FSP+ Q++   + D    ++V+ M   
Sbjct: 886  SAANDASIRIWDSDGK-CEQTLRSHSWTVTALAFSPDDQRLISGSSD--RTIKVWDMSI- 941

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            I +  + +      + +  FS +GK    S+  D  +  +S          L     I  
Sbjct: 942  IGKNTRVVRAHDKWVDSLTFSRDGKYVA-SISDDMTLMTWSA-TTGEYMHTLGGHKDILN 999

Query: 306  SASYSPDSSQIVFESDREGK--------------------------------------EQ 327
               +S D+      SD+  +                                        
Sbjct: 1000 GLCFSSDNHLASAASDQTARIWDIFTGECKETLEGHEDSVNSVDFSPDDSLLVSSSSDHT 1059

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            + V + +     ++ +    S    V+S  G  IA +    +   I    +      L  
Sbjct: 1060 VRVWEVDTGMCIQLFEGHTDSVGRAVFSTDGQYIA-SSSRDKSVRIWSTAETECVWVLNG 1118

Query: 388  EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             D  + +  +S   + +  +     D   +++ +
Sbjct: 1119 HDGWVNSAAFSDDSQFVASTST---DKTVRIWHV 1149


>gi|326471918|gb|EGD95927.1| protein kinase subdomain-containing protein [Trichophyton tonsurans
            CBS 112818]
          Length = 1538

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 49/325 (15%), Positives = 97/325 (29%), Gaps = 64/325 (19%)

Query: 149  ASWRKIAHTISDDIYQ----------SITGEKGDFNSRILFVSESV--VSGIIKNSLCVM 196
            +  R +A   SD   +           +     D+ + I F   SV   SG    ++ + 
Sbjct: 795  SGQRHLASASSDRTIRIWDVDDGRCIKVLKGHSDWVNSIAFKQNSVYLASGSSDKTVRIW 854

Query: 197  DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
            D   +    +       +    FS N + +A A  D    +R++  D    +  + + + 
Sbjct: 855  DVATSTCVRVLQGHTNWVNSVAFSHNGKYLASAANDAS--IRIWDSD---GKCEQTLRSH 909

Query: 257  RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               + A  FS + +R  IS   D  + ++ + +    T  +        S ++S D   +
Sbjct: 910  SWTVTALAFSPDDQRL-ISGSSDRTIKVWDMSIIGKNTRVVRAHDKWVDSLTFSRDGKYV 968

Query: 317  V---------------------------------FESDR-----EGKEQLYVMQSNGSDQ 338
                                              F SD         +   +      + 
Sbjct: 969  ASISDDMTLMTWSATTGEYMHTLGGHKDILNGLCFSSDNHLASAASDQTARIWDIFTGEC 1028

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PT 396
            K   +  E S     +SP     +    S     + V + D      L E          
Sbjct: 1029 KETLEGHEDSVNSVDFSP---DDSLLVSSSSDHTVRVWEVDTGMCIQLFEGHTDSVGRAV 1085

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSI 421
            +S  G+ +  S +   D   +++S 
Sbjct: 1086 FSTDGQYIASSSR---DKSVRIWST 1107



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/274 (14%), Positives = 82/274 (29%), Gaps = 48/274 (17%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     S+ + D DG        S    +    FSP+ Q++   + D    ++V+ M   
Sbjct: 886  SAANDASIRIWDSDGK-CEQTLRSHSWTVTALAFSPDDQRLISGSSD--RTIKVWDMSI- 941

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            I +  + +      + +  FS +GK    S+  D  +  +S          L     I  
Sbjct: 942  IGKNTRVVRAHDKWVDSLTFSRDGKYVA-SISDDMTLMTWSA-TTGEYMHTLGGHKDILN 999

Query: 306  SASYSPDSSQIVFESDREGK--------------------------------------EQ 327
               +S D+      SD+  +                                        
Sbjct: 1000 GLCFSSDNHLASAASDQTARIWDIFTGECKETLEGHEDSVNSVDFSPDDSLLVSSSSDHT 1059

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            + V + +     ++ +    S    V+S  G  IA +    +   I    +      L  
Sbjct: 1060 VRVWEVDTGMCIQLFEGHTDSVGRAVFSTDGQYIA-SSSRDKSVRIWSTAETECVWVLNG 1118

Query: 388  EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             D  + +  +S   + +  +     D   +++ +
Sbjct: 1119 HDGWVNSAAFSDDSQFVASTST---DKTVRIWHV 1149


>gi|153870450|ref|ZP_01999850.1| G-protein beta WD-40 repeat [Beggiatoa sp. PS]
 gi|152073086|gb|EDN70152.1| G-protein beta WD-40 repeat [Beggiatoa sp. PS]
          Length = 348

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 92/262 (35%), Gaps = 29/262 (11%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           + +Y       G+F            SG    ++ + + +   +      RD + +   F
Sbjct: 112 NSVYSVAFSPNGNFL----------ASGSKDKTIKLWEINTGRVWRTWRHRDSV-WSVAF 160

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            PN + +A  + D      V L + +  +  K      S +L+  FS++G+    S  +D
Sbjct: 161 HPNGKLLASGSQDQ----TVKLWEVKSGKLLKTFKQHNSAVLSVTFSADGRFMA-SGDQD 215

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             ++I+  D++      +        S ++SPD   +   S+      + +   +   ++
Sbjct: 216 GLINIW--DVEKREVLHMILEHSNIWSVAFSPDGRYLASGSN---DSSIKIWDVSTGKKR 270

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTW 397
              +          ++  G ++A          I +      +    L    +++ +  +
Sbjct: 271 LTLKGHGNGVLSVAFTTDGQILASGSDDST---IRLWDVQTGKLLNTLKEHGNSVLSVAF 327

Query: 398 SPSGRSLIFSRKKDGDTGSKLY 419
           SP GR   F      D   KL+
Sbjct: 328 SPDGR---FFASASQDKTIKLW 346



 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 80/225 (35%), Gaps = 15/225 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + ++   FS + + +A  + D      + L           +   ++ + +  F
Sbjct: 64  TLNGHRKKVYSVAFSLDGRFLASGSGDQ----TIKLWWLPSGELLGTLQGHKNSVYSVAF 119

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NG     S  KD+ + ++ ++  +    R         S ++ P+   +   S     
Sbjct: 120 SPNGNFLA-SGSKDKTIKLWEIN--TGRVWRTWRHRDSVWSVAFHPNGKLLASGSQ---D 173

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + + +       +  +   ++     +S  G  +A +        I  ++K      +
Sbjct: 174 QTVKLWEVKSGKLLKTFKQHNSAVLSVTFSADGRFMA-SGDQDGLINIWDVEKREVLHMI 232

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           L E SN+ +  +SP GR L        D+  K++ +    +  TL
Sbjct: 233 L-EHSNIWSVAFSPDGRYLA---SGSNDSSIKIWDVSTGKKRLTL 273



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 75/242 (30%), Gaps = 38/242 (15%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            +LW++   +             WR   H   D ++       G          + + SG
Sbjct: 135 IKLWEINTGRV------------WRTWRHR--DSVWSVAFHPNG----------KLLASG 170

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               ++ + +     +       +  +    FS + + +A    D      + + D    
Sbjct: 171 SQDQTVKLWEVKSGKLLKTFKQHNSAVLSVTFSADGRFMASGDQDG----LINIWDVEKR 226

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINI- 305
                I    S I +  FS +G+    S   D ++ I+  D+ +   +RLT       + 
Sbjct: 227 EVLHMILEH-SNIWSVAFSPDGRYLA-SGSNDSSIKIW--DVSTGK-KRLTLKGHGNGVL 281

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S +++ D   +   SD      + +            ++   S     +SP G   A   
Sbjct: 282 SVAFTTDGQILASGSD---DSTIRLWDVQTGKLLNTLKEHGNSVLSVAFSPDGRFFASAS 338

Query: 366 FS 367
             
Sbjct: 339 QD 340



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 25/190 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP-------ASWRKIAHTISD------ 160
           G+++  G     V  +LW+VK  K +   K  +S        A  R +A    D      
Sbjct: 164 GKLLASGSQDQTV--KLWEVKSGKLLKTFKQHNSAVLSVTFSADGRFMASGDQDGLINIW 221

Query: 161 -----DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
                ++   I      ++         + SG   +S+ + D      R         + 
Sbjct: 222 DVEKREVLHMILEHSNIWSVAFSPDGRYLASGSNDSSIKIWDVSTGKKRLTLKGHGNGVL 281

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              F+ + Q +A  + D      + L D +  +    +    + +L+  FS +G+    S
Sbjct: 282 SVAFTTDGQILASGSDDS----TIRLWDVQTGKLLNTLKEHGNSVLSVAFSPDGRFFA-S 336

Query: 276 VQKDEAMDIY 285
             +D+ + ++
Sbjct: 337 ASQDKTIKLW 346


>gi|170728838|ref|YP_001762864.1| peptidase S9 prolyl oligopeptidase [Shewanella woodyi ATCC 51908]
 gi|169814185|gb|ACA88769.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella woodyi ATCC 51908]
          Length = 652

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 71/188 (37%), Gaps = 12/188 (6%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               FS++G   L+   +    ++Y +++++     LT+        S+ P+  +++   
Sbjct: 59  FGSSFSADGSYILMGSDQSGIFNLYKMNIKTGQQTALTDFKDTTYPVSWFPNDDRVLLTQ 118

Query: 321 DREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVM 376
           D  G     L+V +++G+  K ++  +        ++  G     T      +   +   
Sbjct: 119 DNGGNELYHLFVRETDGT-VKDLTNTENTRANFVNFTNDGAFFYATTNERDPKFMDLYRY 177

Query: 377 KKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSR--KKDGDTGSKLYSIDLNGRNETLINT 433
             +  +  L+ E+    +    SP G   +F+   K   +  S  Y +DL  R       
Sbjct: 178 DANTYERTLVFENKLGFEVAEVSPDG---LFASLAKMHTNRDSDTYLLDLRKRTSKPTII 234

Query: 434 PAYASDPQ 441
            +  +DP 
Sbjct: 235 -SEHTDPA 241



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 1/93 (1%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS 400
           +  +  +YF   +S  G  I         F +  M     Q+  L +  +   P +W P+
Sbjct: 51  TFFETTTYFGSSFSADGSYILMGSDQSGIFNLYKMNIKTGQQTALTDFKDTTYPVSWFPN 110

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              ++ ++   G+    L+  + +G  + L NT
Sbjct: 111 DDRVLLTQDNGGNELYHLFVRETDGTVKDLTNT 143


>gi|209527944|ref|ZP_03276430.1| WD-40 repeat protein [Arthrospira maxima CS-328]
 gi|209491634|gb|EDZ92003.1| WD-40 repeat protein [Arthrospira maxima CS-328]
          Length = 1081

 Score = 69.3 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 50/298 (16%), Positives = 98/298 (32%), Gaps = 40/298 (13%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
               +    +LWD+ + K +                         +       + +RI+F
Sbjct: 555 ASGSVDGTVQLWDINNGKCL-------------------------ACLPGHTSWINRIVF 589

Query: 180 VSESVVSGIIKNSLCVMDRDGANIR--YLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
             +S +         +   D AN +     P  ++ ++   FS + Q +A  + D   I 
Sbjct: 590 SPDSQILATTSKDTNIKLWDVANAKCLKTLPDHEEEVWGVAFSYDGQVLASGSAD-GTIK 648

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
              + D         I    S +    FS NGK  L S   D    ++  D+      +L
Sbjct: 649 LWQIADINNTSLAASISAHDSDLRGLAFSPNGK-ILASGSGDLTTKLW--DVSDIHHPQL 705

Query: 298 TNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            NTL  + S     +++PD   +   +  +      V   N      I           V
Sbjct: 706 LNTLQEHTSWIEELAFTPDGKILAMCAADKKVSLWNVENINNIKLNSILGGWCNWIRSVV 765

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           +SP G  +A      + + +     +  +    L      +Q+  +SP G+++  + +
Sbjct: 766 FSPDGKTLA---SGSDDYYVRSWDTETGEILANLRGHKERVQSVAFSPDGQTIASASR 820



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 101/311 (32%), Gaps = 43/311 (13%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ +  G D   V  R WD +  + +         A+ R   H   + +        G  
Sbjct: 770  GKTLASGSDDYYV--RSWDTETGEIL---------ANLR--GHK--ERVQSVAFSPDG-- 812

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    +++ S     ++     +         +    L+   FS + Q +       
Sbjct: 813  --------QTIASASRDFTVRCWSVEHHKCLSTLRAHTNQLYAVAFSYDHQLLV----SA 860

Query: 234  EDILRVYLMDTR-IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             +   + L D     +  K I  +   I    FS + ++  +    D  + ++ +D Q  
Sbjct: 861  GNDRTIKLWDVNPTPKLIKEINPYPCKIFTVAFSPDSQKIAVGGS-DNILQVWDIDFQ-K 918

Query: 293  ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               +        IS ++SP+   +   S+      + +      +   I   ++   +  
Sbjct: 919  PPLKFVGHQGEIISVNFSPNGQILATSSN---DNTVRLWDVTTQECLAIFPCQQVWTYLI 975

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKK 410
             +SP G L+A     GE   + +      +             A  +SP G++L  S   
Sbjct: 976  SFSPDGQLLA---SGGENNTVRLWDVTTHECYATFNGHQSWVLAVAFSPDGQTLASSS-- 1030

Query: 411  DGDTGSKLYSI 421
              D   KL+++
Sbjct: 1031 -ADETIKLWNV 1040



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 73/209 (34%), Gaps = 20/209 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A  + D      V   DT        +   +  + +  FS +G+    S  +
Sbjct: 766 FSPDGKTLASGSDD----YYVRSWDTETGEILANLRGHKERVQSVAFSPDGQTIA-SASR 820

Query: 279 DEAMDIYSVDLQS--NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D  +  +SV+     +     TN L+     ++S D   +V      G ++   +     
Sbjct: 821 DFTVRCWSVEHHKCLSTLRAHTNQLYAV---AFSYDHQLLV----SAGNDRTIKLWDVNP 873

Query: 337 DQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
             K I +        F   +SP    IA    S     +  +       + +     + +
Sbjct: 874 TPKLIKEINPYPCKIFTVAFSPDSQKIA-VGGSDNILQVWDIDFQKPPLKFVGHQGEIIS 932

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +SP+G+ L  S     D   +L+ +  
Sbjct: 933 VNFSPNGQILATSSN---DNTVRLWDVTT 958



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 70/191 (36%), Gaps = 14/191 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN + +A  + D      V L D    +    +    S I    FS +  + L +  KD
Sbjct: 548 SPNLKILASGSVDG----TVQLWDINNGKCLACLPGHTSWINRIVFSPD-SQILATTSKD 602

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQ 338
             + ++ V   +   + L +        ++S D   +   S  +G  +L+ +   N +  
Sbjct: 603 TNIKLWDV-ANAKCLKTLPDHEEEVWGVAFSYDGQVLASGS-ADGTIKLWQIADINNTSL 660

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQA 394
                  ++      +SP G ++A +        +  +  D    +LL       S ++ 
Sbjct: 661 AASISAHDSDLRGLAFSPNGKILA-SGSGDLTTKLWDVS-DIHHPQLLNTLQEHTSWIEE 718

Query: 395 PTWSPSGRSLI 405
             ++P G+ L 
Sbjct: 719 LAFTPDGKILA 729



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 40/105 (38%), Gaps = 5/105 (4%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +    N++ + D        + P +    +   FSP+ Q +A       +   V L D  
Sbjct: 944  TSSNDNTVRLWDVTTQECLAIFPCQQVWTYLISFSPDGQLLA----SGGENNTVRLWDVT 999

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                       +S +LA  FS +G+    S   DE + +++V  +
Sbjct: 1000 THECYATFNGHQSWVLAVAFSPDGQTLA-SSSADETIKLWNVPTR 1043


>gi|113970460|ref|YP_734253.1| peptidase S9 prolyl oligopeptidase [Shewanella sp. MR-4]
 gi|113885144|gb|ABI39196.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sp. MR-4]
          Length = 687

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 91/256 (35%), Gaps = 28/256 (10%)

Query: 218 RFSPNQQKVAY----ATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             S +  K+ Y         E    +Y++D T+ D  P +I +         F+++ K  
Sbjct: 46  AVSHDGTKLVYGLKTVNDKGEASSDLYILDLTQADAKPMQITSAAGTEHDVSFANDDKSI 105

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---EGKEQLY 329
                +  +  ++ + L     +++++          S D  QIV  S R   E K+   
Sbjct: 106 YFLASRSGSSQLFQLPLTGGEAQQVSDLPLDIDGYKLSNDGKQIV-LSMRVFPECKDLAC 164

Query: 330 VMQSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QE 383
                 ++++R S  +E           W        F      +    V+        E
Sbjct: 165 SKDKFKAEEERKSTGREYKQLMVRHWDTWEDHARNHLFVGALNGEKLTKVVDITQGLDTE 224

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSR-----KKDGDTGSKLYSIDLNGRNETLIN------ 432
                 S ++  +++P G+ +++S       +   T   L+ + +NG   T +       
Sbjct: 225 TPPKPFSGMEEVSFTPDGKYVVYSAKAPSKDQAWTTNYDLWQVSVNGGKATNLTADNIAW 284

Query: 433 --TPAYASDPQWVGFM 446
              P ++SD +++ ++
Sbjct: 285 DAQPIFSSDGRYMAYL 300



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/307 (12%), Positives = 99/307 (32%), Gaps = 70/307 (22%)

Query: 175 SRILFVSESVV-SGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
           +++++  ++V   G   + L ++D   A+ + +   S      +  F+ + + + +    
Sbjct: 52  TKLVYGLKTVNDKGEASSDLYILDLTQADAKPMQITSAAGTEHDVSFANDDKSIYFLASR 111

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------- 277
                             +++ +    I   + S++GK+ ++S++               
Sbjct: 112 SGS--SQLFQLPLTGGEAQQVSDLPLDIDGYKLSNDGKQIVLSMRVFPECKDLACSKDKF 169

Query: 278 -------------------------KDEAMDIYSVDLQSNATER---LTNTLFINISA-- 307
                                          ++   L      +   +T  L        
Sbjct: 170 KAEEERKSTGREYKQLMVRHWDTWEDHARNHLFVGALNGEKLTKVVDITQGLDTETPPKP 229

Query: 308 -------SYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQKRISQDKEASYFDPV 353
                  S++PD   +V+ +    K+Q +    +       G     ++ D  A    P+
Sbjct: 230 FSGMEEVSFTPDGKYVVYSAKAPSKDQAWTTNYDLWQVSVNGGKATNLTADNIAWDAQPI 289

Query: 354 WSPQGDLIAFTKFSGEKFA---IGVMKKDGSQER-LLVEDSNLQAPT---WSPSGRSLIF 406
           +S  G  +A+   +   F      +M +D S  +   V     ++P+   ++P  R+L  
Sbjct: 290 FSSDGRYMAYLAMTKPGFEADRYRIMLRDTSTGQSKEVAPLWDRSPSSLMFAPDNRTLYV 349

Query: 407 SRKKDGD 413
           + +  G 
Sbjct: 350 TAQDIGQ 356



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 67/184 (36%), Gaps = 8/184 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G +            +      L  +  +G     LT        +P FS + 
Sbjct: 235 EVSFTPDGKYVVYSAKAPSKDQAWTTNYDLWQVSVNGGKATNLTADNIAWDAQPIFSSDG 294

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D  R+ L DT   ++ +    +     +  F+ + +   ++ Q  
Sbjct: 295 RYMAYLAMTKPGFEADRYRIMLRDTSTGQSKEVAPLWDRSPSSLMFAPDNRTLYVTAQDI 354

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
             + I+ V+ Q    + +  +   N   + + D  Q++F+S    +   LY + ++G   
Sbjct: 355 GQVSIFKVNTQFGDVQSV-YSDGSNSLIAIADD--QLIFDSKTLVEPGDLYRINTDGQGL 411

Query: 339 KRIS 342
           KR++
Sbjct: 412 KRLT 415


>gi|126174145|ref|YP_001050294.1| peptidase S9 prolyl oligopeptidase [Shewanella baltica OS155]
 gi|125997350|gb|ABN61425.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella baltica OS155]
          Length = 682

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 84/291 (28%), Gaps = 67/291 (23%)

Query: 218 RFSPNQQKVAY----ATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             S +  K+ Y         E    +YL+D T     P ++ +         F+++ K  
Sbjct: 42  TVSHDGTKLVYGLKTVNDKGEGSSDLYLLDLTDTKAKPLQLTSAAGTEHDVSFATDDKSI 101

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------------- 317
                +  +  ++ + L      ++++          S D  Q+V               
Sbjct: 102 YFLAGRSGSSQLFQLPLTGGEAVQVSDLPLDIDGYKLSNDGKQVVLSMRVFPECKDLACS 161

Query: 318 ---FESDREGK----------------------EQLYVMQSNGSDQKRISQDKEASYFDP 352
              F ++ E K                        L+V   NG    ++    +    + 
Sbjct: 162 KDKFTAESERKSTGREYKQLMVRHWDTWEDHARSHLFVGAVNGEKLTKVVDVTQGLDTET 221

Query: 353 -----------VWSPQGDLIAFTKFSG-------EKFAIGVMKKDGSQERLLVEDSNLQA 394
                       ++P G  + ++  +          + +  +   G     L +D+    
Sbjct: 222 PPKPFSGMEEVTFTPDGKFVVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWD 281

Query: 395 --PTWSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNETLINTPAYASDPQ 441
             PT+S  GR + +   K     +  Y I L      +T    P +   P 
Sbjct: 282 AQPTFSSDGRYMAYLAMKKPGFEADRYGIMLRDTTTGQTKEVAPLWDRSPS 332



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 62/184 (33%), Gaps = 8/184 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G F            +      L  +   G     LT        +P FS + 
Sbjct: 231 EVTFTPDGKFVVYSAKAPSKDQAWTTNYDLWQVPVTGGTATNLTKDNLAWDAQPTFSSDG 290

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D   + L DT   +  +    +     +  F+ + +   ++ Q  
Sbjct: 291 RYMAYLAMKKPGFEADRYGIMLRDTTTGQTKEVAPLWDRSPSSLMFAPDNRTLYVTAQDI 350

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
             + I+ V+ Q      +        ++  +  + +++F+S    +   LY + ++G   
Sbjct: 351 GQVSIFQVNTQFGDVRSI---YSDGTNSLIAVTNDELIFDSKTLVEPGDLYSITTDGQGL 407

Query: 339 KRIS 342
           KR++
Sbjct: 408 KRLT 411



 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 111/322 (34%), Gaps = 38/322 (11%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           LV G      K     +  L D+ D K     +  S+  +   ++    D     + G  
Sbjct: 50  LVYGLKTVNDKGEGSSDLYLLDLTDTKAKP-LQLTSAAGTEHDVSFATDDKSIYFLAGRS 108

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA--- 227
           G  +S++  +  +    +  + L  +D DG     L+    Q++   R  P  + +A   
Sbjct: 109 G--SSQLFQLPLTGGEAVQVSDL-PLDIDGY---KLSNDGKQVVLSMRVFPECKDLACSK 162

Query: 228 --YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             +    +            +        + RS +       NG++    V   + +D  
Sbjct: 163 DKFTAESERKSTGREYKQLMVRHWDTWEDHARSHLFVGAV--NGEKLTKVVDVTQGLDTE 220

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQ 338
           +     +  E +T          ++PD   +V+ +    K+Q +    +       G   
Sbjct: 221 TPPKPFSGMEEVT----------FTPDGKFVVYSAKAPSKDQAWTTNYDLWQVPVTGGTA 270

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL-LVEDSNLQA 394
             +++D  A    P +S  G  +A+       F     G+M +D +  +   V     ++
Sbjct: 271 TNLTKDNLAWDAQPTFSSDGRYMAYLAMKKPGFEADRYGIMLRDTTTGQTKEVAPLWDRS 330

Query: 395 PT---WSPSGRSLIFSRKKDGD 413
           P+   ++P  R+L  + +  G 
Sbjct: 331 PSSLMFAPDNRTLYVTAQDIGQ 352


>gi|296117072|ref|ZP_06835670.1| putative exported dipeptidyl peptidase IV [Gluconacetobacter
           hansenii ATCC 23769]
 gi|295976408|gb|EFG83188.1| putative exported dipeptidyl peptidase IV [Gluconacetobacter
           hansenii ATCC 23769]
          Length = 760

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 57/275 (20%), Positives = 85/275 (30%), Gaps = 62/275 (22%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---------RFSSN 268
            +S +  ++A+A  D     R   +        +++ +                  +  +
Sbjct: 83  AWSRDGARLAFAWNDHGTAFRDIWVYEAETGVVQQVTHMDEAAHGKAKGVGVTQLAWLPD 142

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+ A +    D A+ +  +       E + + +   IS   SPD   + F SD  G   L
Sbjct: 143 GRMAFV---MDGALRVADLHGHVGVLEIVRHGVG-QISP--SPDGRWLAFVSD--GALWL 194

Query: 329 YVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGE----------------- 369
             M    S   RI     A        WSP  D IA                        
Sbjct: 195 RDMGQAASTPARIVVPGTADDGVDRMEWSPASDRIAVVMADNRAVHKVEIDYDHDGQVHH 254

Query: 370 -------------KFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRSLIFSRKKD- 411
                         FA+GV+   G   R +  D N Q P W    SP GRSL F  + D 
Sbjct: 255 DHVTRAFPGDPDTGFAVGVVDVAGGAPRWMARD-NAQDPVWNFGLSPDGRSL-FVNQSDL 312

Query: 412 --GDTGSKLYSIDLNGRNET--LINTPAYASDPQW 442
                   +Y +   GR +       PA    P W
Sbjct: 313 TIKHHAIDIYDVP-TGRRQVFYRFADPAQVR-PDW 345



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/310 (10%), Positives = 89/310 (28%), Gaps = 53/310 (17%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           KG   +++ ++ +  ++ ++  +L V D  G                P  SP+ + +A+ 
Sbjct: 130 KGVGVTQLAWLPDGRMAFVMDGALRVADLHGHVGVLEIVRHGVGQISP--SPDGRWLAFV 187

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV------------- 276
           +     +  +    +   R          +     +S    R  + +             
Sbjct: 188 SDGALWLRDMGQAASTPARIVVPGTADDGVDRM-EWSPASDRIAVVMADNRAVHKVEIDY 246

Query: 277 -----------------QKDEAMDIYSVDLQSNATERLTNTLFINISASY----SPDSSQ 315
                              D    +  VD+   A   +      +    +    SPD   
Sbjct: 247 DHDGQVHHDHVTRAFPGDPDTGFAVGVVDVAGGAPRWMARDNAQD--PVWNFGLSPDGRS 304

Query: 316 IVFESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLIAFTKFSG 368
           + F +  +       + +       ++   +  + +   P     W+P+G  +       
Sbjct: 305 L-FVNQSDLTIKHHAIDIYDVPTGRRQVFYRFADPAQVRPDWQVAWAPRGQGLVVLTNRY 363

Query: 369 EKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSID 422
               +  +   G++ R +          +  ++        L F+  + G    ++Y + 
Sbjct: 364 GYNQLYHIPTIGARPRAITRVMPGQGPWEIESFVADPVHGRLYFTANQTGYAQRQVYRVG 423

Query: 423 LNGRNETLIN 432
           + G    L+ 
Sbjct: 424 MEGGTPELLT 433



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 69/224 (30%), Gaps = 43/224 (19%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDR---------------APKRIGNFRSMILAP 263
           +SP   ++A    D+  + +V +      +                   +G       AP
Sbjct: 222 WSPASDRIAVVMADNRAVHKVEIDYDHDGQVHHDHVTRAFPGDPDTGFAVGVVDVAGGAP 281

Query: 264 RF---------------SSNGKRALISVQ----KDEAMDIYSVDLQSNATERLTNTLF-- 302
           R+               S +G+   ++      K  A+DIY V                 
Sbjct: 282 RWMARDNAQDPVWNFGLSPDGRSLFVNQSDLTIKHHAIDIYDVPTGRRQVFYRFADPAQV 341

Query: 303 -INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ----DKEASYFDPVWSPQ 357
             +   +++P    +V  ++R G  QLY + + G+  + I++             V  P 
Sbjct: 342 RPDWQVAWAPRGQGLVVLTNRYGYNQLYHIPTIGARPRAITRVMPGQGPWEIESFVADPV 401

Query: 358 GDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
              + FT       +  +  +  +G    LL          +SP
Sbjct: 402 HGRLYFTANQTGYAQRQVYRVGMEGGTPELLTRTHGTHEVVFSP 445


>gi|254426410|ref|ZP_05040126.1| hypothetical protein S7335_1093 [Synechococcus sp. PCC 7335]
 gi|196187824|gb|EDX82790.1| hypothetical protein S7335_1093 [Synechococcus sp. PCC 7335]
          Length = 1209

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 91/308 (29%), Gaps = 45/308 (14%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     RLWD K  + +   +        R +     D   + +     D   R+  
Sbjct: 853  ASGSHDKTVRLWDAKTGQCLRTLQ-----GQTRNVIAMAFDPTGEYLVSSHADSLIRLWS 907

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            +                     N++         +    F P++  +A  ++D      V
Sbjct: 908  LRT------------------GNLQLTFSGHLSGVEAISFHPHEPLLASGSHDR----TV 945

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             L D+R     +    ++  + A  FS +G+    +   +  + ++ +  ++    +L  
Sbjct: 946  RLWDSRTGACKQVWHEYKDWVRAVTFSPDGQWLA-TSSDEALLRLWHM--KTGELFQLYP 1002

Query: 300  TLF----INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                        ++SPDS  +         + + ++           +  +       W 
Sbjct: 1003 NSASRSNWIFELAWSPDSQILACGGC---DQTIKLLNMATGTCIGTLEGHQGWAVAVAWH 1059

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGD 413
            P G ++A          + +      Q   + +      Q+  W P G+ L        D
Sbjct: 1060 PHGQILASASLDQT---VRLWDASTGQCLRIFDSRIDGRQSVAWHPEGQFLA---MSGPD 1113

Query: 414  TGSKLYSI 421
               +++ +
Sbjct: 1114 ATIRIWDV 1121



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 85/287 (29%), Gaps = 66/287 (22%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D D   +       D  +    +SP+ + +A  ++D      V + +  
Sbjct: 637 SSAADGNVKLWDADTGKLLNTLSGHDNWVVAIAWSPDGKWLASGSHDQ----TVRIWELE 692

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRAL-------------------------------- 273
                  +    S I +  FS +G+                                   
Sbjct: 693 SGSVLHILSGHPSWIWSVAFSPDGRFLASSGEDQSIRIWDVVSGECIQTLWGHLDLVWDV 752

Query: 274 ----------------ISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQI 316
                           +S  +DE + ++  D+ S    + L        S ++SPD + +
Sbjct: 753 AFQPHPLASEEQSPLLVSASRDETIKLW--DVSSGQCLKTLREHTAQIWSLNFSPDGNTL 810

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              S     + + +  +     + I         D  + P     A          + + 
Sbjct: 811 ASTS---ADQTIRLWDTQHYRCQHICAGHLNGIRDATFHPNNQTFASGSHDKT---VRLW 864

Query: 377 KKDGSQ-ERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                Q  R L  +  N+ A  + P+G  L+       D+  +L+S+
Sbjct: 865 DAKTGQCLRTLQGQTRNVIAMAFDPTGEYLV---SSHADSLIRLWSL 908



 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 93/294 (31%), Gaps = 38/294 (12%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
           +   +  R I   I+ +  ++                  +++ + ++ L +    G N+ 
Sbjct: 461 YVRESQIRLILAPIAQEFRRTFAAIAPIEQQ-----LLRILTALRRSELQMGGYGGGNLV 515

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L    D  L    FS    + AY        +     +       + IG   S+     
Sbjct: 516 NLCCHLDLDLSGFDFSHLTIQHAYLRAKGLRHVNFRYTNLANSVFTQMIGLIFSVN---- 571

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSP---------- 311
           FS +G         D   +I     Q+   ++L           SA+YSP          
Sbjct: 572 FSPDGLLLA---TGDFHGEICV--WQTTDYQKLATCQEPTGAAWSAAYSPVAVAFCPILS 626

Query: 312 ---DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                  ++  S  +G  +L+   ++           +       WSP G  +A +    
Sbjct: 627 PAYGGRHLLASSAADGNVKLW--DADTGKLLNTLSGHDNWVVAIAWSPDGKWLA-SGSHD 683

Query: 369 EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +   I  ++  GS   +L    S + +  +SP GR L        D   +++ +
Sbjct: 684 QTVRIWELE-SGSVLHILSGHPSWIWSVAFSPDGRFLA---SSGEDQSIRIWDV 733



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/294 (12%), Positives = 85/294 (28%), Gaps = 31/294 (10%)

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYL 206
               R +    ++      T   G   S        +  +G     +CV           
Sbjct: 542 AKGLRHVNFRYTNLANSVFTQMIGLIFSVNFSPDGLLLATGDFHGEICVWQTTDYQKLAT 601

Query: 207 TPSRDQILFEPRFSP-------------NQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
                   +   +SP               + +  ++  D +   V L D    +    +
Sbjct: 602 CQEPTGAAWSAAYSPVAVAFCPILSPAYGGRHLLASSAADGN---VKLWDADTGKLLNTL 658

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
               + ++A  +S +GK    S   D+ + I+ ++   +    L+       S ++SPD 
Sbjct: 659 SGHDNWVVAIAWSPDGKWLA-SGSHDQTVRIWELE-SGSVLHILSGHPSWIWSVAFSPDG 716

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG------DLIAFTKFS 367
               F +     + + +      +  +         +D  + P          +  +   
Sbjct: 717 R---FLASSGEDQSIRIWDVVSGECIQTLWGHLDLVWDVAFQPHPLASEEQSPLLVSASR 773

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            E   +  +      + L    + + +  +SP G +L        D   +L+  
Sbjct: 774 DETIKLWDVSSGQCLKTLREHTAQIWSLNFSPDGNTLA---STSADQTIRLWDT 824


>gi|320040789|gb|EFW22722.1| WD domain-containing protein [Coccidioides posadasii str. Silveira]
          Length = 617

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 75/210 (35%), Gaps = 16/210 (7%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R L+ + +    +  N +C   +    +          ++   FS +  K+A  + D   
Sbjct: 263 RCLYHNTAEPPSLYSNHMCDRSQFPTQVTLELNQHTNEVWYLEFSHDGTKLATTSSDR-- 320

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              V + DTR      ++ +    +    +S +  +  IS  +D    ++  D+++    
Sbjct: 321 --SVIIYDTRTFGVIHKLTDHGGPVAFATWSPDDTKL-ISCSQDCKARLW--DVETG-RC 374

Query: 296 RLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            LT  +      SA+++PDS   V  S  + K QL +   +G      +    +   D  
Sbjct: 375 LLTIDHHREPVTSAAWAPDSESFVTCSL-DNKSQLCLWSVHGD--PLYTWAGSSRIRDCA 431

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            SP G  +           I V      +E
Sbjct: 432 ISPDGRRLIAISTDR---RIHVYNFPTREE 458



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G +   +        +   D ++     +LT+       A++SPD ++++  S  +
Sbjct: 306 FSHDGTKLATTSS---DRSVIIYDTRTFGVIHKLTDHGGPVAFATWSPDDTKLISCSQ-D 361

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            K +L+                        W+P  +         +   + +    G   
Sbjct: 362 CKARLW--DVETGRCLLTIDHHREPVTSAAWAPDSESFVTCSLDNKS-QLCLWSVHGDPL 418

Query: 384 RLLVEDSNLQAPTWSPSGRS-LIFSRKK-----DGDTGSKLYSIDLN 424
                 S ++    SP GR  +  S  +     +  T  + YS+ L+
Sbjct: 419 YTWAGSSRIRDCAISPDGRRLIAISTDRRIHVYNFPTREEEYSMRLD 465



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 82/258 (31%), Gaps = 19/258 (7%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ--SITGEKGDFNSRILFVSESVVSG 187
           L D   + QI    + ++       ++ + D       +T E     + + ++  S    
Sbjct: 252 LLDQVKQNQINRCLYHNTAEPPSLYSNHMCDRSQFPTQVTLELNQHTNEVWYLEFSHDGT 311

Query: 188 II-----KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +       S+ + D     + +        +    +SP+  K+   + D +      L 
Sbjct: 312 KLATTSSDRSVIIYDTRTFGVIHKLTDHGGPVAFATWSPDDTKLISCSQDCK----ARLW 367

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    R    I + R  + +  ++ + +   ++   D    +    +  +          
Sbjct: 368 DVETGRCLLTIDHHREPVTSAAWAPDSES-FVTCSLDNKSQLCLWSVHGDPLYTW-AGSS 425

Query: 303 INISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                + SPD  +++  S DR    +++V      +++  S   +        S     +
Sbjct: 426 RIRDCAISPDGRRLIAISTDR----RIHVYNFPTREEE-YSMRLDLDLTCINISSDSRYM 480

Query: 362 AFTKFSGEKFAIGVMKKD 379
                 GE   + +  KD
Sbjct: 481 LVNMSEGEVQLLDIETKD 498


>gi|303319501|ref|XP_003069750.1| WD domain, G-beta repeat containing protein [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240109436|gb|EER27605.1| WD domain, G-beta repeat containing protein [Coccidioides posadasii
           C735 delta SOWgp]
          Length = 617

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 75/210 (35%), Gaps = 16/210 (7%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R L+ + +    +  N +C   +    +          ++   FS +  K+A  + D   
Sbjct: 263 RCLYHNTAEPPSLYSNHMCDRSQFPTQVTLELNQHTNEVWYLEFSHDGTKLATTSSDR-- 320

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              V + DTR      ++ +    +    +S +  +  IS  +D    ++  D+++    
Sbjct: 321 --SVIIYDTRTFGVIHKLTDHGGPVAFATWSPDDTKL-ISCSQDCKARLW--DVETG-RC 374

Query: 296 RLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            LT  +      SA+++PDS   V  S  + K QL +   +G      +    +   D  
Sbjct: 375 LLTIDHHREPVTSAAWAPDSESFVTCSL-DNKSQLCLWSVHGD--PLYTWAGSSRIRDCA 431

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            SP G  +           I V      +E
Sbjct: 432 ISPDGRRLIAISTDR---RIHVYNFPTREE 458



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G +   +        +   D ++     +LT+       A++SPD ++++  S  +
Sbjct: 306 FSHDGTKLATTSS---DRSVIIYDTRTFGVIHKLTDHGGPVAFATWSPDDTKLISCSQ-D 361

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            K +L+                        W+P  +         +   + +    G   
Sbjct: 362 CKARLW--DVETGRCLLTIDHHREPVTSAAWAPDSESFVTCSLDNKS-QLCLWSVHGDPL 418

Query: 384 RLLVEDSNLQAPTWSPSGRS-LIFSRKK-----DGDTGSKLYSIDLN 424
                 S ++    SP GR  +  S  +     +  T  + YS+ L+
Sbjct: 419 YTWAGSSRIRDCAISPDGRRLIAISTDRRIHVYNFPTREEEYSMRLD 465



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 82/258 (31%), Gaps = 19/258 (7%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ--SITGEKGDFNSRILFVSESVVSG 187
           L D   + QI    + ++       ++ + D       +T E     + + ++  S    
Sbjct: 252 LLDQVKQNQINRCLYHNTAEPPSLYSNHMCDRSQFPTQVTLELNQHTNEVWYLEFSHDGT 311

Query: 188 II-----KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +       S+ + D     + +        +    +SP+  K+   + D +      L 
Sbjct: 312 KLATTSSDRSVIIYDTRTFGVIHKLTDHGGPVAFATWSPDDTKLISCSQDCK----ARLW 367

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    R    I + R  + +  ++ + +   ++   D    +    +  +          
Sbjct: 368 DVETGRCLLTIDHHREPVTSAAWAPDSES-FVTCSLDNKSQLCLWSVHGDPLYTW-AGSS 425

Query: 303 INISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                + SPD  +++  S DR    +++V      +++  S   +        S     +
Sbjct: 426 RIRDCAISPDGRRLIAISTDR----RIHVYNFPTREEE-YSMRLDLDLTCINISSDSRYM 480

Query: 362 AFTKFSGEKFAIGVMKKD 379
                 GE   + +  KD
Sbjct: 481 LVNMSEGEVQLLDIETKD 498


>gi|323447009|gb|EGB02983.1| hypothetical protein AURANDRAFT_34671 [Aureococcus anophagefferens]
          Length = 279

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 71/227 (31%), Gaps = 16/227 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             VVSG    ++ V D                +      P+ ++V   + D      V +
Sbjct: 11  RRVVSGSHDKTVKVWDAATGECVATLAGHSGWVSSVAVFPDGRRVVSGSGDG----TVKV 66

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
            D         +      +++     +G+R ++S  KD+ + ++  D  +      L   
Sbjct: 67  WDAATGECVATLAGHSGTVMSVAVFPDGRR-VVSGSKDKTVKVW--DAATGECVATLAGH 123

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S +  PD  ++V  S   G   + V  +   +     +   +  +     P G  
Sbjct: 124 SGWVSSVAVFPDGRRVVSGS---GDGTVKVWDAATGECVATLEGHSSEVYGVAVFPDGRR 180

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS--PSGRSLI 405
           +           + V      +    +   ++   + +  P GR ++
Sbjct: 181 VVSGSDDET---VKVWDAATGECVATLAGHSVSVLSVAVFPDGRRVV 224



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 59/188 (31%), Gaps = 16/188 (8%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ ++V   ++D      V + D         +      + +     +G+R ++S   D 
Sbjct: 8   PDGRRVVSGSHDK----TVKVWDAATGECVATLAGHSGWVSSVAVFPDGRR-VVSGSGDG 62

Query: 281 AMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + ++  D  +      L       +S +  PD  ++V  S     + + V  +   +  
Sbjct: 63  TVKVW--DAATGECVATLAGHSGTVMSVAVFPDGRRVVSGSK---DKTVKVWDAATGECV 117

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS- 398
                           P G  +      G    + V      +    +E  + +    + 
Sbjct: 118 ATLAGHSGWVSSVAVFPDGRRVVSGSGDGT---VKVWDAATGECVATLEGHSSEVYGVAV 174

Query: 399 -PSGRSLI 405
            P GR ++
Sbjct: 175 FPDGRRVV 182



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 61/207 (29%), Gaps = 12/207 (5%)

Query: 163 YQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
             ++ G  G   S  +F     VVSG    ++ V D                +      P
Sbjct: 75  VATLAGHSGTVMSVAVFPDGRRVVSGSKDKTVKVWDAATGECVATLAGHSGWVSSVAVFP 134

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + ++V   + D      V + D         +    S +       +G+R ++S   DE 
Sbjct: 135 DGRRVVSGSGDG----TVKVWDAATGECVATLEGHSSEVYGVAVFPDGRR-VVSGSDDET 189

Query: 282 MDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + ++  D  +      L       +S +  PD  ++V  S       + V  +   +   
Sbjct: 190 VKVW--DAATGECVATLAGHSVSVLSVAVFPDGRRVVSGSK---DNTVKVWDAATGECVA 244

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFS 367
                          P G  +    + 
Sbjct: 245 TLAGHSNWVRSVAVFPDGLRVVSGSWD 271


>gi|119509016|ref|ZP_01628167.1| WD40-like Beta Propeller protein [Nodularia spumigena CCY9414]
 gi|119466182|gb|EAW47068.1| WD40-like Beta Propeller protein [Nodularia spumigena CCY9414]
          Length = 183

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 9/121 (7%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI------SASYSPDSSQI 316
           P  S NG+       ++ +  +   DL     +RL     +N       S S S +   I
Sbjct: 50  PALSGNGRFLAFISNRNGSHQLLVYDL---TEQRLVAIPGLNRRQTIAESPSLSYNGRYI 106

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            + +  +G+  + +        + I+        +P  SP G  + F   S  ++ I V+
Sbjct: 107 AYLTSDQGRPVVALYDRATQKSEIITPTYRGWVRNPGISPDGRFVVFETASRGQWDIEVL 166

Query: 377 K 377
            
Sbjct: 167 D 167



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 4/124 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           N+ +     + S +   + F S+R G  QL V          I     ++     P  S 
Sbjct: 42  NSRYTEEQPALSGNGRFLAFISNRNGSHQLLVYDLTEQRLVAIPGLNRRQTIAESPSLSY 101

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  IA+      +  + +  +   +  ++       ++ P  SP GR ++F     G  
Sbjct: 102 NGRYIAYLTSDQGRPVVALYDRATQKSEIITPTYRGWVRNPGISPDGRFVVFETASRGQW 161

Query: 415 GSKL 418
             ++
Sbjct: 162 DIEV 165



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 2/119 (1%)

Query: 216 EPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +P  S N + +A+ +  +    L VY +  +   A   +   +++  +P  S NG+    
Sbjct: 49  QPALSGNGRFLAFISNRNGSHQLLVYDLTEQRLVAIPGLNRRQTIAESPSLSYNGRYIAY 108

Query: 275 SVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                    +   D  +  +E +T        +   SPD   +VFE+   G+  + V+ 
Sbjct: 109 LTSDQGRPVVALYDRATQKSEIITPTYRGWVRNPGISPDGRFVVFETASRGQWDIEVLD 167



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 10/106 (9%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL------QAP 395
           S +   +   P  S  G  +AF         + V     +++RL+            ++P
Sbjct: 40  SLNSRYTEEQPALSGNGRFLAFISNRNGSHQLLVYDL--TEQRLVAIPGLNRRQTIAESP 97

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDP 440
           + S +GR + +     G     LY      ++E +  T   +  +P
Sbjct: 98  SLSYNGRYIAYLTSDQGRPVVALYD-RATQKSEIITPTYRGWVRNP 142



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 35/98 (35%), Gaps = 1/98 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
              R  I   P  S N + +AY T D    + V L D    ++      +R  +  P  S
Sbjct: 87  LNRRQTIAESPSLSYNGRYIAYLTSDQGRPV-VALYDRATQKSEIITPTYRGWVRNPGIS 145

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +G+  +         DI  +D   N    + N   +N
Sbjct: 146 PDGRFVVFETASRGQWDIEVLDRGPNIELDIPNGASVN 183


>gi|73670796|ref|YP_306811.1| hypothetical protein Mbar_A3357 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397958|gb|AAZ72231.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 535

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/266 (14%), Positives = 86/266 (32%), Gaps = 37/266 (13%)

Query: 193 LCVMDRDGANIRYLTPS------RDQILFEPRFSPNQQKVAYATYDDEDILRV------- 239
           L   + DG+ I  L  S        + +  P +S +    AY    +    ++       
Sbjct: 98  LYAANADGSGITRLARSEMTSSNGGKAITPPLWSQSGDYFAYMELVEGSGYKIKSASLFF 157

Query: 240 ---YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
               L   +      ++  F + +   ++S    +  + V       I   DL       
Sbjct: 158 MSKDLNLIQKVELDSKMIGFETGLSNFKWSPKENKMALLVSG----KIIIYDLDEKNDFN 213

Query: 297 LTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             +    N+      +SPD  +IVF  +      +  +        ++   +    +D  
Sbjct: 214 F-SIPGDNVEITDMEWSPDGKKIVFSKN---SHDIITLDLEKKALNQVYSAEHVGMYDEK 269

Query: 354 WSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
           WS     + F       K     + + ++ ++  +   +      + +   W P    ++
Sbjct: 270 WSTDSKKLIFYEIKTSEKVDDVSYDVYLVDENVEKPVKITTFTSGSSRVIQWYPDSERIL 329

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLI 431
              KK  D    LYS+ + G+ + +I
Sbjct: 330 --VKKCSDDSYALYSLSITGKMKKII 353



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 68/218 (31%), Gaps = 54/218 (24%)

Query: 265 FSSNGKRALISV----------QKDEAMDIYSVDLQSNATERL-------TNTLFINISA 307
           +S +G   LI V          Q      +Y+ +   +   RL       +N        
Sbjct: 69  WSPDGSHMLIDVFVSAYPKGKPQLGGVEALYAANADGSGITRLARSEMTSSNGGKAITPP 128

Query: 308 SYSPDSSQIVFESDREGKEQ------LYVMQSNGSDQKRISQDK-----EASYFDPVWSP 356
            +S       +    EG         L+ M  + +  +++  D      E    +  WSP
Sbjct: 129 LWSQSGDYFAYMELVEGSGYKIKSASLFFMSKDLNLIQKVELDSKMIGFETGLSNFKWSP 188

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---------TWSPSGRSLIFS 407
           + + +A          I +   D         D N   P          WSP G+ ++FS
Sbjct: 189 KENKMALLVSG----KIIIYDLDEKN------DFNFSIPGDNVEITDMEWSPDGKKIVFS 238

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYAS--DPQWV 443
           +         + ++DL  +    + +  +    D +W 
Sbjct: 239 KNSH-----DIITLDLEKKALNQVYSAEHVGMYDEKWS 271



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 69/202 (34%), Gaps = 43/202 (21%)

Query: 193 LCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           + + D D  N   +  P  +  + +  +SP+ +K+ ++    ++   +  +D       +
Sbjct: 201 IIIYDLDEKNDFNFSIPGDNVEITDMEWSPDGKKIVFS----KNSHDIITLDLEKKALNQ 256

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                   +   ++S++ K+ +    K                   T+    ++S     
Sbjct: 257 VYSAEHVGMYDEKWSTDSKKLIFYEIK-------------------TSEKVDDVS----- 292

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                           +Y++  N     +I+     S     W P  + I   K S + +
Sbjct: 293 --------------YDVYLVDENVEKPVKITTFTSGSSRVIQWYPDSERILVKKCSDDSY 338

Query: 372 AIGVMKKDGSQERLLVEDSNLQ 393
           A+  +   G  ++++ +D ++ 
Sbjct: 339 ALYSLSITGKMKKIIEKDRDID 360


>gi|254413890|ref|ZP_05027659.1| protein kinase domain [Microcoleus chthonoplastes PCC 7420]
 gi|196179487|gb|EDX74482.1| protein kinase domain [Microcoleus chthonoplastes PCC 7420]
          Length = 619

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 77/225 (34%), Gaps = 18/225 (8%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG   +++ + +     +++        +    FS + Q +A  + D      + + + 
Sbjct: 395 VSGSWDHTIKLWELTTQTLKHTLKQHSGWIKSVAFSSDGQLLASGSADK----TINIWNL 450

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +    K +    SMI     S +G + L S   D  + ++  +L +    +LT     +
Sbjct: 451 NLQDIQKTLDGHSSMIHTIVISPDG-QILASGSADRTIKLW--NLATGEI-QLTLHGHTD 506

Query: 305 I--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++SP    ++  S       + V      D      +   +      S +G L+ 
Sbjct: 507 AVNSLAFSPSGQLLISGS---ADATIQVWNLKTGDILLTLTEHTDAVHSVAISAKGRLLI 563

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
                G    + +      +    + D  + + +   SP   +L 
Sbjct: 564 SGSADGT---VRLWHPGRGKLIQTLSDHSAGVMSVAISPDSSTLA 605



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 64/203 (31%), Gaps = 14/203 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    F P+ Q +A           V L                S+I    
Sbjct: 331 RTLRGHSSSIHAIAFHPDGQILA----SGGADRSVKLWHLESGIPSCTFSGHSSLIDTIA 386

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G+  + S   D  + ++ +  Q+     L        S ++S D   +   S    
Sbjct: 387 FSPDGQFLV-SGSWDHTIKLWELTTQTLKHT-LKQHSGWIKSVAFSSDGQLLASGS---A 441

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +   N  D ++      +     V SP G ++A          I +      + +
Sbjct: 442 DKTINIWNLNLQDIQKTLDGHSSMIHTIVISPDGQILASGSADRT---IKLWNLATGEIQ 498

Query: 385 LLVEDSNL--QAPTWSPSGRSLI 405
           L +        +  +SPSG+ LI
Sbjct: 499 LTLHGHTDAVNSLAFSPSGQLLI 521



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 72/223 (32%), Gaps = 16/223 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    S+ +   +             ++    FSP+ Q +   ++D      + L +  
Sbjct: 354 SGGADRSVKLWHLESGIPSCTFSGHSSLIDTIAFSPDGQFLVSGSWDH----TIKLWELT 409

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +      I +  FSS+G+    S   D+ ++I++++LQ      L     +  
Sbjct: 410 TQTLKHTLKQHSGWIKSVAFSSDGQLLA-SGSADKTINIWNLNLQDIQKT-LDGHSSMIH 467

Query: 306 SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +   SPD   +   S DR     + +      + +        +     +SP G L+   
Sbjct: 468 TIVISPDGQILASGSADRT----IKLWNLATGEIQLTLHGHTDAVNSLAFSPSGQLLISG 523

Query: 365 KFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLI 405
                   I V           L      + +   S  GR LI
Sbjct: 524 SADAT---IQVWNLKTGDILLTLTEHTDAVHSVAISAKGRLLI 563



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 62/183 (33%), Gaps = 11/183 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + + +  +I+        ++     SP+ Q +A  + D      + L +  
Sbjct: 438 SGSADKTINIWNLNLQDIQKTLDGHSSMIHTIVISPDGQILASGSADR----TIKLWNLA 493

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
                  +      + +  FS +G + LIS   D  + ++  +L++      LT      
Sbjct: 494 TGEIQLTLHGHTDAVNSLAFSPSG-QLLISGSADATIQVW--NLKTGDILLTLTEHTDAV 550

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S + S     ++  S  +G  +L+          +   D  A       SP    +A  
Sbjct: 551 HSVAISAKGRLLISGS-ADGTVRLW--HPGRGKLIQTLSDHSAGVMSVAISPDSSTLASA 607

Query: 365 KFS 367
              
Sbjct: 608 AQD 610



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 71/209 (33%), Gaps = 12/209 (5%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +    +        T   +  + +    S I A  F  +G + L S   D ++ ++   L
Sbjct: 310 SVASPNPSVKPNTLTPTWQCVRTLRGHSSSIHAIAFHPDG-QILASGGADRSVKLW--HL 366

Query: 290 QSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +S       +    +  + ++SPD   +V  S       + + +      K   +     
Sbjct: 367 ESGIPSCTFSGHSSLIDTIAFSPDGQFLVSGS---WDHTIKLWELTTQTLKHTLKQHSGW 423

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                +S  G L+A +  + +   I  +     Q+ L    S +     SP G+ L    
Sbjct: 424 IKSVAFSSDGQLLA-SGSADKTINIWNLNLQDIQKTLDGHSSMIHTIVISPDGQILA--- 479

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               D   KL+++   G  +  ++    A
Sbjct: 480 SGSADRTIKLWNL-ATGEIQLTLHGHTDA 507


>gi|91217047|ref|ZP_01254010.1| putative peptidase [Psychroflexus torquis ATCC 700755]
 gi|91184918|gb|EAS71298.1| putative peptidase [Psychroflexus torquis ATCC 700755]
          Length = 647

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 69/166 (41%), Gaps = 8/166 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDR 322
            FSS+    LIS  +    ++Y+V  +      +T +   +I A SY P+ ++++  +D 
Sbjct: 49  SFSSDNSSLLISSNRSGIYNVYTVPSEGGEMRAITTSDSTSIFAESYFPNDNRMLLSADG 108

Query: 323 EGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKK 378
            G   + L+V    G + K I+ DKEA      WS     + F     +   F +  M  
Sbjct: 109 NGDEIDHLFVRDLEG-NIKDITPDKEAKSAFYGWSDDDQYLYFGSNKRNPSYFDVYKMSI 167

Query: 379 DG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           D  S E +  +DS L     S        ++  +    S L+  D+
Sbjct: 168 DDFSSELIYQDDSGLNFSGMSSDENYFALTKSLN-TNDSDLFLYDV 212



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 102/254 (40%), Gaps = 11/254 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-DDEDILRVYLMD 243
            +G   + L V D +G NI+ +TP ++       +S + Q + + +   +     VY M 
Sbjct: 108 GNGDEIDHLFVRDLEG-NIKDITPDKEAKSAFYGWSDDDQYLYFGSNKRNPSYFDVYKMS 166

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLF 302
                +     +   +  +   SS+     ++   +    D++  D+++    ++     
Sbjct: 167 IDDFSSELIYQDDSGLNFS-GMSSDENYFALTKSLNTNDSDLFLYDVKTEEMIKINENQS 225

Query: 303 INISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            N S  +S D+S+  + +D  G+   L        ++K++  +K        ++ +G  +
Sbjct: 226 KNSSQDFSNDNSKFYYTTDDGGEFSYLMSYDLATKEKKKVL-EKSWDIMGSGFTSEGKYM 284

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSL-IFSRKKDGDTGSKL 418
                   K AI V+     +   L +  D ++ +  +S   + + +++     ++ S L
Sbjct: 285 VVYVNEDGKNAIQVLDSKTMEPIDLPDFKDQSITSVGFSDDEKWMRMYAG--GSNSPSDL 342

Query: 419 YSIDLNGRNETLIN 432
           Y+ ++  + +  + 
Sbjct: 343 YTYNIETKEQHKLT 356



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 4/142 (2%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             E+  N   I    S+S D+S ++  S+R G   +Y + S G + + I+     S F  
Sbjct: 35  TIEQFMNNEAI-GGGSFSSDNSSLLISSNRSGIYNVYTVPSEGGEMRAITTSDSTSIFAE 93

Query: 353 VWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRK 409
            + P  + +  +          + V   +G+ + +  +     A   WS   + L F   
Sbjct: 94  SYFPNDNRMLLSADGNGDEIDHLFVRDLEGNIKDITPDKEAKSAFYGWSDDDQYLYFGSN 153

Query: 410 KDGDTGSKLYSIDLNGRNETLI 431
           K   +   +Y + ++  +  LI
Sbjct: 154 KRNPSYFDVYKMSIDDFSSELI 175



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/282 (13%), Positives = 90/282 (31%), Gaps = 22/282 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI-----------YQSITGEK----- 170
           E R     D   I  + +F +       A    D+I            + IT +K     
Sbjct: 78  EMRAITTSDSTSIFAESYFPNDNRMLLSADGNGDEIDHLFVRDLEGNIKDITPDKEAKSA 137

Query: 171 --GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G  +        S         +  M  D  +   +      + F    S ++   A 
Sbjct: 138 FYGWSDDDQYLYFGSNKRNPSYFDVYKMSIDDFSSELIYQDDSGLNFS-GMSSDENYFAL 196

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-IYSV 287
               + +   ++L D + +   K I   +S   +  FS++  +   +         + S 
Sbjct: 197 TKSLNTNDSDLFLYDVKTEEMIK-INENQSKNSSQDFSNDNSKFYYTTDDGGEFSYLMSY 255

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           DL +   +++    +  + + ++ +   +V   + +GK  + V+ S   +   +   K+ 
Sbjct: 256 DLATKEKKKVLEKSWDIMGSGFTSEGKYMVVYVNEDGKNAIQVLDSKTMEPIDLPDFKDQ 315

Query: 348 SYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKDGSQERLLVE 388
           S     +S     +  +   S     +     +  ++  L +
Sbjct: 316 SITSVGFSDDEKWMRMYAGGSNSPSDLYTYNIETKEQHKLTD 357


>gi|307325287|ref|ZP_07604490.1| serine/threonine protein kinase with WD40 repeats [Streptomyces
           violaceusniger Tu 4113]
 gi|306889091|gb|EFN20074.1| serine/threonine protein kinase with WD40 repeats [Streptomyces
           violaceusniger Tu 4113]
          Length = 707

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 77/237 (32%), Gaps = 28/237 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A           + + D    R  + +G          FS +GK    +  
Sbjct: 448 AFSPDGKLLAATNMTG----WLTMWDVAEHRQVRFLGTTVDGGERVAFSPDGK-LFATGS 502

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQ 332
           +  ++ ++  +   +      +        ++SPD   +   SD           + +  
Sbjct: 503 QTGSVFLFDTNNHKDDILAYYDQEANVTGVAFSPDGRTLASASDDSDSNLTPKHSVRLWD 562

Query: 333 SN-------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                    G D  R++           +SP G  IA   +      + +      ++R 
Sbjct: 563 VAHRDPEPYGQDDPRLTISPAQGVLSLAFSPDGRTIATGSYDDT---VRLWDAKTGRQRA 619

Query: 386 LVEDS---NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            + DS    +    +SP G++L          G  L+++    +   ++ T A   +
Sbjct: 620 TLGDSYQARVDHLAFSPDGKTLA----APAGRGLLLWNV-ATRKPRAILVTGAQGPE 671



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 72/213 (33%), Gaps = 26/213 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRALIS 275
            FSP+ + +A  + D +  L             +R  +GN         FS +GK    +
Sbjct: 400 AFSPDGKTLATNSDDGKVRLWNVADRKPRATFIQRDSVGNDGFGGRGVAFSPDGKLLA-A 458

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                 + ++ V  +      L  T+      ++SPD           G +   V   + 
Sbjct: 459 TNMTGWLTMWDV-AEHRQVRFLGTTVDGGERVAFSPDGKLFA-----TGSQTGSVFLFDT 512

Query: 336 SDQK---RISQDKEASYFDPVWSPQGDLIAFTKFSGE-----KFAIGVMKKDGS------ 381
           ++ K       D+EA+     +SP G  +A      +     K ++ +            
Sbjct: 513 NNHKDDILAYYDQEANVTGVAFSPDGRTLASASDDSDSNLTPKHSVRLWDVAHRDPEPYG 572

Query: 382 --QERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
               RL +  +  + +  +SP GR++      D
Sbjct: 573 QDDPRLTISPAQGVLSLAFSPDGRTIATGSYDD 605



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 87/269 (32%), Gaps = 38/269 (14%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            V  +G     V F      D K +           W    H     +    T   G   
Sbjct: 436 SVGNDGFGGRGVAFS----PDGKLLAATNMTGWLTMWDVAEHR---QVRFLGTTVDGG-- 486

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIR---YLTPSRDQILFEPRFSPNQQKVAYATY 231
            R+ F  +  +      +  V   D  N +        ++  +    FSP+ + +A A+ 
Sbjct: 487 ERVAFSPDGKLFATGSQTGSVFLFDTNNHKDDILAYYDQEANVTGVAFSPDGRTLASASD 546

Query: 232 DDEDIL----RVYLMDTRIDRAPKRIGNFRSMILAPR-------FSSNGKRALISVQKDE 280
           D +  L     V L D           +   + ++P        FS +G+    +   D+
Sbjct: 547 DSDSNLTPKHSVRLWDVAHRDPEPYGQDDPRLTISPAQGVLSLAFSPDGRTIA-TGSYDD 605

Query: 281 AMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            + ++  D ++   +R T            ++SPD   +   + R     L +       
Sbjct: 606 TVRLW--DAKTG-RQRATLGDSYQARVDHLAFSPDGKTLAAPAGRG----LLLWNVATRK 658

Query: 338 QKRI----SQDKEASYFDPVWSPQGDLIA 362
            + I    +Q  E++  D  +S  G LIA
Sbjct: 659 PRAILVTGAQGPESTVRDVAFSRDGRLIA 687



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 14/132 (10%)

Query: 299 NTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF----DPV 353
                +    ++SPD   +   SD +GK +L+ +         I +D   +         
Sbjct: 390 TGQSRDTEGMAFSPDGKTLATNSD-DGKVRLWNVADRKPRATFIQRDSVGNDGFGGRGVA 448

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDG 412
           +SP G L+A T  +G      V   +  Q R L       +   +SP G+  +F+    G
Sbjct: 449 FSPDGKLLAATNMTGWLTMWDV--AEHRQVRFLGTTVDGGERVAFSPDGK--LFAT---G 501

Query: 413 DTGSKLYSIDLN 424
                ++  D N
Sbjct: 502 SQTGSVFLFDTN 513


>gi|145535916|ref|XP_001453690.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124421414|emb|CAK86293.1| unnamed protein product [Paramecium tetraurelia]
          Length = 567

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 78/214 (36%), Gaps = 10/214 (4%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + + +              +    FSP    +A  + D      ++L D +  +   +
Sbjct: 286 VYLWNLNTGKQVLKFIGHTDCIRSICFSPYGTTLASGSDDK----SIHLWDIKTGQKKAK 341

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +    S + +  FS +G +   S   D+++ ++ +       + + +++ I  S  ++PD
Sbjct: 342 LAGHSSTVTSVCFSPDGTKLA-SGSGDKSVRLWDIKTGKQKAKFVRHSIGI-SSVCFAPD 399

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              I   S   G + + +       Q        ++     +SP G  +A +        
Sbjct: 400 GRTIASGS---GDKSILLWDIETGYQNGKLDGHSSTVTSVYFSPDGTTLA-SGSGDNSIR 455

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           +  +K    + +L      +++  +S +   ++F
Sbjct: 456 LWDIKTGQQKAKLDGHSGIVKSVCFSSNVEIILF 489



 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 72/236 (30%), Gaps = 34/236 (14%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            LW++   KQ+            + I HT  D I        G           ++ SG 
Sbjct: 287 YLWNLNTGKQV-----------LKFIGHT--DCIRSICFSPYG----------TTLASGS 323

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              S+ + D      +         +    FSP+  K+A  + D      V L D +  +
Sbjct: 324 DDKSIHLWDIKTGQKKAKLAGHSSTVTSVCFSPDGTKLASGSGDK----SVRLWDIKTGK 379

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISA 307
              +       I +  F+ +G+             I   D+++     +L        S 
Sbjct: 380 QKAKFVRHSIGISSVCFAPDGRTIA---SGSGDKSILLWDIETGYQNGKLDGHSSTVTSV 436

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +SPD + +   S   G   + +       QK              +S   ++I F
Sbjct: 437 YFSPDGTTLASGS---GDNSIRLWDIKTGQQKAKLDGHSGIVKSVCFSSNVEIILF 489



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 51/158 (32%), Gaps = 27/158 (17%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K          RLWD+K  KQ             + + H+I   I        G     
Sbjct: 359 TKLASGSGDKSVRLWDIKTGKQ-----------KAKFVRHSI--GISSVCFAPDG----- 400

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG    S+ + D +              +    FSP+   +A  + D+   
Sbjct: 401 -----RTIASGSGDKSILLWDIETGYQNGKLDGHSSTVTSVYFSPDGTTLASGSGDN--- 452

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             + L D +  +   ++     ++ +  FSSN +  L 
Sbjct: 453 -SIRLWDIKTGQQKAKLDGHSGIVKSVCFSSNVEIILF 489


>gi|117928613|ref|YP_873164.1| peptidase S9 prolyl oligopeptidase [Acidothermus cellulolyticus
           11B]
 gi|117649076|gb|ABK53178.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Acidothermus cellulolyticus 11B]
          Length = 700

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 65/205 (31%), Gaps = 27/205 (13%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---------RFSSNGKRALISVQKD--- 279
           D   +LRV L  T +  A    G    +   P           S +G R  +   +    
Sbjct: 200 DFPRLLRVDLDGTAVSSAQPVSGRLHDLTPDPGRALDEVGLAVSDDG-RIAVCGWRTPLG 258

Query: 280 ---EAMDIYSVDLQSNATERLTNTLFINI-----SASYSPDSSQIVFE----SDREGKEQ 327
              E + + ++D  S     L       +       + SPD   +V       DR+   +
Sbjct: 259 RGVEGVSLVAIDTTSGERRVLLAATAEPVKQNFDQPAISPDGRYVVCVCEEEGDRDHPPR 318

Query: 328 --LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             L ++  +      ++ +      +P +S  G  + F      +  +  +     Q R 
Sbjct: 319 CSLRLVDLHSGAVTPLAPEFPYWPANPRFSADGSAVFFVADEQGRCPVFRVDIATGQVRR 378

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKK 410
           L  D        SP G+ L   R +
Sbjct: 379 LASDGAYSEVNVSPDGKYLYALRSR 403



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 59/191 (30%), Gaps = 34/191 (17%)

Query: 280 EAMDIYSVDLQS----------NATERLTNTLF---INISASYSPDSSQIVFESDRE--- 323
           +   +  VDL                 LT         +  + S D  +I     R    
Sbjct: 200 DFPRLLRVDLDGTAVSSAQPVSGRLHDLTPDPGRALDEVGLAVSDDG-RIAVCGWRTPLG 258

Query: 324 -GKEQLYVMQSNG-SDQKRISQDKEA-----SYFDPVWSPQGDLIAFT------KFSGEK 370
            G E + ++  +  S ++R+     A     ++  P  SP G  +         +    +
Sbjct: 259 RGVEGVSLVAIDTTSGERRVLLAATAEPVKQNFDQPAISPDGRYVVCVCEEEGDRDHPPR 318

Query: 371 FAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            ++ ++         L  +       P +S  G ++ F   + G     ++ +D+     
Sbjct: 319 CSLRLVDLHSGAVTPLAPEFPYWPANPRFSADGSAVFFVADEQGRCP--VFRVDIATGQV 376

Query: 429 TLINTPAYASD 439
             + +    S+
Sbjct: 377 RRLASDGAYSE 387



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 20/96 (20%)

Query: 265 FSSNGKRALISVQKDEAMD------IYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIV 317
            + +G+R +  VQ   A +      ++ VD    A   RLT +       +++ D   ++
Sbjct: 41  LAPDGRRLVCVVQTPAADNSAYVSALWEVDPAGEAPPRRLTFSAEGETQPAFTADGD-LL 99

Query: 318 FESDR------------EGKEQLYVMQSNGSDQKRI 341
           F S R            E    L+ + ++G +  ++
Sbjct: 100 FVSKRSSPSPSPGSAETETTAGLWRLPASGGEAYQV 135



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 53/183 (28%), Gaps = 20/183 (10%)

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           V G     G+    V     D    ++             R +    ++ + Q+      
Sbjct: 250 VCGWRTPLGRGVEGVSLVAIDTTSGER-------------RVLLAATAEPVKQNFDQPAI 296

Query: 172 DFNSRILFVSESVVSGI---IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             + R +              + SL ++D     +  L P        PRFS +   V +
Sbjct: 297 SPDGRYVVCVCEEEGDRDHPPRCSLRLVDLHSGAVTPLAPEFPYWPANPRFSADGSAVFF 356

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-LISVQKDEAMDIYSV 287
              +      V+ +D    +  +   +          S +GK    +  + DE      +
Sbjct: 357 VADEQGRCP-VFRVDIATGQVRRLASD--GAYSEVNVSPDGKYLYALRSRIDEPPRPVRL 413

Query: 288 DLQ 290
           ++ 
Sbjct: 414 EVD 416


>gi|51892083|ref|YP_074774.1| hypothetical protein STH945 [Symbiobacterium thermophilum IAM
           14863]
 gi|51855772|dbj|BAD39930.1| hypothetical protein [Symbiobacterium thermophilum IAM 14863]
          Length = 437

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 63/198 (31%), Gaps = 22/198 (11%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLM 242
           G       V    G          + + +  R+    SP+  +    ++   D   V   
Sbjct: 83  GGAARYGAVSLAGGGLEPGPGHDPEDLPYWDRWHLLLSPDAGRAVVYSFHGFDRTFVDRE 142

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTL 301
              +        NF    +   +S +G R L+ SV+ D     Y +D   N         
Sbjct: 143 TGAVSEPQAP--NFGGSHMFDSWSPDGSRFLVQSVRTDPVPGFYFLDRDGNPAGTFAEPG 200

Query: 302 FINISASYSPDSSQIVFES---------------DREGKEQLYVMQSNGSDQKRISQDKE 346
           + +    +SPD  ++ F S               +    E++ V+          + D  
Sbjct: 201 YYSHRGVWSPDGKRLAFLSVPADLFYPRIPEEWEEPPYGERVGVLDPETGRVTYFAIDGL 260

Query: 347 ASYFDPVWSPQGDLIAFT 364
             Y  PVWSP G+ +A  
Sbjct: 261 TFYAHPVWSPDGERLAVV 278



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 60/162 (37%), Gaps = 25/162 (15%)

Query: 265 FSSN-GKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESD 321
            S + G+  + S       D   VD ++ A    +  N    ++  S+SPD S+ + +S 
Sbjct: 119 LSPDAGRAVVYSF---HGFDRTFVDRETGAVSEPQAPNFGGSHMFDSWSPDGSRFLVQSV 175

Query: 322 R-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--------- 371
           R +     Y +  +G+     ++    S+   VWSP G  +AF     + F         
Sbjct: 176 RTDPVPGFYFLDRDGNPAGTFAEPGYYSHRG-VWSPDGKRLAFLSVPADLFYPRIPEEWE 234

Query: 372 ------AIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
                  +GV+  +  +      D       P WSP G  L 
Sbjct: 235 EPPYGERVGVLDPETGRVTYFAIDGLTFYAHPVWSPDGERLA 276



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 68/219 (31%), Gaps = 32/219 (14%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS--ASY 309
           R+G F     A   S +     +  +   A    +V L     E        +      +
Sbjct: 58  RLGPFDESGSAWWLSPD--AVWVYAKVGGAARYGAVSLAGGGLEP---GPGHDPEDLPYW 112

Query: 310 -------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG-DLI 361
                  SPD+ + V  S   G ++ +V +  G+  +  + +   S+    WSP G   +
Sbjct: 113 DRWHLLLSPDAGRAVVYSFH-GFDRTFVDRETGAVSEPQAPNFGGSHMFDSWSPDGSRFL 171

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSR------------ 408
             +  +        + +DG+      E         WSP G+ L F              
Sbjct: 172 VQSVRTDPVPGFYFLDRDGNPAGTFAEPGYYSHRGVWSPDGKRLAFLSVPADLFYPRIPE 231

Query: 409 -KKDGDTGSKLYSIDLNGRNETLINTPA--YASDPQWVG 444
             ++   G ++  +D      T        + + P W  
Sbjct: 232 EWEEPPYGERVGVLDPETGRVTYFAIDGLTFYAHPVWSP 270



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 80/242 (33%), Gaps = 31/242 (12%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--------------DDEDILRV 239
             +DRDG N                +SP+ +++A+ +               +     RV
Sbjct: 184 YFLDRDG-NPAGTFAEPGYYSHRGVWSPDGKRLAFLSVPADLFYPRIPEEWEEPPYGERV 242

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNA 293
            ++D    R      +  +    P +S +G+R  +      +V+ D   + Y        
Sbjct: 243 GVLDPETGRVTYFAIDGLTFYAHPVWSPDGERLAVVCGERTTVRLDGPWEGYETTRLRGP 302

Query: 294 TERLTNTLFINISASYSP---DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-Y 349
              L +     I+    P   D + ++     E     +   S+G+    +     A   
Sbjct: 303 RPCLIDPEAGTIAPMGDPAEGDVTIVILGLADEAALVAWARPSDGAGYGWVPLGGGALVD 362

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIG-----VMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
               WS +G  +     +     +      +  + G  ER+L E   +Q  T SP GR +
Sbjct: 363 LGGTWSVEGAQLVAGGRAALTGQLLPNKLVLFNQRGEVERILAE-GAIQGLTASPDGRHV 421

Query: 405 IF 406
            F
Sbjct: 422 AF 423


>gi|158337600|ref|YP_001518775.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158307841|gb|ABW29458.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1136

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/293 (16%), Positives = 101/293 (34%), Gaps = 31/293 (10%)

Query: 133  VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                 Q I     S     R  AH  +  I+  IT +   F +          SG     
Sbjct: 838  TAGGDQFIRLWDQSGEERLRIDAH--AGRIWD-ITQQGEYFAT---------ASGDRTAR 885

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            +     +  ++          +F    +P  Q++A A+ D     R++       +    
Sbjct: 886  VW---SNTGDLITELRGHQSEVFGVSINPTAQRIATASKD--GTARLWNWQ---GQPLAI 937

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +   RS I +  FS   +  + +   D+ + ++S+  Q+ A   L        +  +SPD
Sbjct: 938  LRGHRSPIWSVTFSPT-EPIVATASADQTVRLWSMTGQTTAI--LEGHQGRVWTVEFSPD 994

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               +   SD +G  +L+     G    +  +    +     +SP G  +A     G    
Sbjct: 995  GQSLATASD-DGTARLW--DLEGQSLAKF-EGHRGAVRGVRFSPDGQSLATVSEDGT--- 1047

Query: 373  IGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            + + +  G Q       S+     ++S  G+ +  + +  G     + ++ L+
Sbjct: 1048 LRLWELQGRQLAEFKHGSSRLFDLSFSADGQFVATASENQGVKVWAVEALSLD 1100



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 74/208 (35%), Gaps = 27/208 (12%)

Query: 246 IDRAPKRIGNF---RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            D+  + + +F    S I A +FS +G+    S   D+ + I   +LQ     ++     
Sbjct: 643 WDKKGQPLADFRPHPSAITALQFSPDGQTLA-SASFDQTVQIS--NLQGQRILKIPVGHG 699

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S  + PD   +      +G   L+   S      R         F  V+S  G  +A
Sbjct: 700 PVRSLHWRPDGQVLA-TGSYDGYLHLW---SRSGKLIRSWNGHRTQVFSVVFSADGKQLA 755

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLY 419
            +  +     I     D   ERL     +        +SP G+ L+       D  ++L+
Sbjct: 756 -SAAADRLIHIW----DSEGERLETLKGHQDWVRSVQFSPDGKWLV---SGSEDYTTRLW 807

Query: 420 SIDLNGRNETL------INTPAYASDPQ 441
           ++   G  + L      ++    +SDP 
Sbjct: 808 NLRQKGPVQVLKHARPVLSLSFMSSDPA 835



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 86/253 (33%), Gaps = 24/253 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +      + + D+ G  +    P    I    +FSP+ Q +A A++D     +   +   
Sbjct: 633 TATNDGQVWLWDKKGQPLADFRPHPSAITAL-QFSPDGQTLASASFD-----QTVQISNL 686

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +   +I      + +  +  +G+    +   D  + ++S                   
Sbjct: 687 QGQRILKIPVGHGPVRSLHWRPDGQVLA-TGSYDGYLHLWS--RSGKLIRSWNGHRTQVF 743

Query: 306 SASYSPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S  +S D  Q+    +DR     +++  S G   + + +  +       +SP G  +   
Sbjct: 744 SVVFSADGKQLASAAADR----LIHIWDSEGERLETL-KGHQDWVRSVQFSPDGKWLVSG 798

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   +  +++ G   ++L     + + ++ S     +       GD   +L+  D 
Sbjct: 799 SEDYTT-RLWNLRQKG-PVQVLKHARPVLSLSFMSSDPAMV----TAGGDQFIRLW--DQ 850

Query: 424 NGRNETLINTPAY 436
           +G     I+  A 
Sbjct: 851 SGEERLRIDAHAG 863



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 84/258 (32%), Gaps = 22/258 (8%)

Query: 163  YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
             Q +   +   +   +    ++V+      + + D+ G     +     +I     +   
Sbjct: 815  VQVLKHARPVLSLSFMSSDPAMVTAGGDQFIRLWDQSGEERLRIDAHAGRI-----WDIT 869

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            QQ   +AT   +   RV+   +        +   +S +     +   +R   +  KD   
Sbjct: 870  QQGEYFATASGDRTARVW---SNTGDLITELRGHQSEVFGVSINPTAQRIA-TASKDGTA 925

Query: 283  DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
             ++  + Q      L        S ++SP    +   S     +Q   + S       I 
Sbjct: 926  RLW--NWQGQPLAILRGHRSPIWSVTFSPTEPIVATAS----ADQTVRLWSMTGQTTAIL 979

Query: 343  QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSG 401
            +  +   +   +SP G  +A     G      +   +G S  +       ++   +SP G
Sbjct: 980  EGHQGRVWTVEFSPDGQSLATASDDGTA---RLWDLEGQSLAKFEGHRGAVRGVRFSPDG 1036

Query: 402  RSLIFSRKKDGDTGSKLY 419
            +SL    +   D   +L+
Sbjct: 1037 QSLATVSE---DGTLRLW 1051



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 95/289 (32%), Gaps = 38/289 (13%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ S     ++ + +  G  I  +      +     + P+ Q +A  +YD      ++L
Sbjct: 670 QTLASASFDQTVQISNLQGQRILKIPVGHGPVRSL-HWRPDGQVLATGSYDG----YLHL 724

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +R  +  +     R+ + +  FS++GK+   S   D  + I+  D +    E L    
Sbjct: 725 W-SRSGKLIRSWNGHRTQVFSVVFSADGKQLA-SAAADRLIHIW--DSEGERLETLKGHQ 780

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNG-----SDQKRISQDKEASYFDPVWSP 356
               S  +SPD   +V  S+ +   +L+ ++  G        + +      S    + + 
Sbjct: 781 DWVRSVQFSPDGKWLVSGSE-DYTTRLWNLRQKGPVQVLKHARPVLSLSFMSSDPAMVTA 839

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGS-------QERLLVEDSNLQAPTWSPSGRSL----- 404
            GD          +  + +    G         E       +  A  WS +G  +     
Sbjct: 840 GGDQFIRLWDQSGEERLRIDAHAGRIWDITQQGEYFATASGDRTARVWSNTGDLITELRG 899

Query: 405 ----IFSRKKDGDTGSKLYSIDLNGRNE------TLINTPAYASDPQWV 443
               +F    +  T  ++ +   +G           +        P W 
Sbjct: 900 HQSEVFGVSIN-PTAQRIATASKDGTARLWNWQGQPLAILRGHRSPIWS 947



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 84/226 (37%), Gaps = 23/226 (10%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             +       + +   RF+P+ Q++  A+ D E    V L D   +   K +G  RS + 
Sbjct: 527 REQNQIRGHQRGITRVRFTPDGQRLITASQDQE----VRLWDLEGNLLAKMVG-HRSGVT 581

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
               S  GK  + +   D    ++  DLQ N    L +   +N   S  P +   +  + 
Sbjct: 582 DACLS--GKTLV-TTAADRTARLW--DLQGNLLTTLPHPQPVNAV-SCPPTADGAIATAT 635

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +G  Q+++    G       +   ++     +SP G  +A   F      + +    G 
Sbjct: 636 NDG--QVWLWDKKGQPLADF-RPHPSAITALQFSPDGQTLASASFDQT---VQISNLQGQ 689

Query: 382 Q-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +  ++ V    +++  W P G+ L       G     L+    +G+
Sbjct: 690 RILKIPVGHGPVRSLHWRPDGQVLA-----TGSYDGYLHLWSRSGK 730



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 61/175 (34%), Gaps = 15/175 (8%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            L          R   +I   +  I   RF+ +G+R  I+  +D+ + ++  DL+ N   
Sbjct: 515 PLLALQQILEDMREQNQIRGHQRGITRVRFTPDGQRL-ITASQDQEVRLW--DLEGNLLA 571

Query: 296 RLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           ++         A  S     +V   +DR  +    +    G+    +   +  +      
Sbjct: 572 KMVGHRSGVTDACLS--GKTLVTTAADRTAR----LWDLQGNLLTTLPHPQPVNAVSCPP 625

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSR 408
           +  G  IA     G    + +  K G          S + A  +SP G++L  + 
Sbjct: 626 TADG-AIATATNDG---QVWLWDKKGQPLADFRPHPSAITALQFSPDGQTLASAS 676


>gi|320103432|ref|YP_004179023.1| Acylaminoacyl-peptidase [Isosphaera pallida ATCC 43644]
 gi|319750714|gb|ADV62474.1| Acylaminoacyl-peptidase [Isosphaera pallida ATCC 43644]
          Length = 734

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 88/281 (31%), Gaps = 62/281 (22%)

Query: 220 SPNQQKVAY---------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           SP+   VAY            D      +++ D +    P+     ++ + +  ++ +GK
Sbjct: 64  SPDGGTVAYSLANPRIPGVDEDGPAFSHLWVADVQGTDKPRPFITGQASVSSLSWTPDGK 123

Query: 271 RALISVQKDEAMD--IYSVDLQSNATERL----TNTLFINISASYSPDSSQIVFES---- 320
                 ++       +Y + +      +L    T+        ++S D  Q+ F S    
Sbjct: 124 GIAHLARRGGDTKTALYVIPIDGGEARKLFEAETDLSGY----AFSADGRQLAFLSKTPT 179

Query: 321 -----DREGKEQLYVMQSNGSDQKRI----------------SQDKEASYFDPVWSP--- 356
                DR  +  +  +  +G    R+                  D + S  +  WSP   
Sbjct: 180 PKQVEDRRNQGFVQEVYEDGLLPTRVGVVTMEPDGIINAKARYLDLDGSASELHWSPVAG 239

Query: 357 QGDLIAFTKFSGEKFAIGVMKK---------DGSQERL--LVEDSNLQAPTWSPSGRS-- 403
              L+     +       + +K         DG  E L  L     L   TWSP G++  
Sbjct: 240 DSRLVVALAPTPTVDDDYMARKVTVVDTVANDGKGEVLARLDNPGKLGQVTWSPDGKTLG 299

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNET--LINTPAYASDPQW 442
           LI  +     +  +L      G      L + P +     W
Sbjct: 300 LISGQDVHDPSEGRLMVAPAEGGPLVDLLPDAPIHVKAFAW 340



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 76/250 (30%), Gaps = 54/250 (21%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM----------DIYSVDLQSN-ATE 295
              P+++   + +      S +G     S+                 ++  D+Q      
Sbjct: 46  GLTPQQVARLK-LATGVVVSPDGGTVAYSLANPRIPGVDEDGPAFSHLWVADVQGTDKPR 104

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                     S S++PD   I   + R G  K  LYV+  +G + +++  + E       
Sbjct: 105 PFITGQASVSSLSWTPDGKGIAHLARRGGDTKTALYVIPIDGGEARKL-FEAETDLSGYA 163

Query: 354 WSPQGDLIAFTK----------FSGEKFA--------------IGVMKKDG---SQERLL 386
           +S  G  +AF               + F               +  M+ DG   ++ R L
Sbjct: 164 FSADGRQLAFLSKTPTPKQVEDRRNQGFVQEVYEDGLLPTRVGVVTMEPDGIINAKARYL 223

Query: 387 VEDSNLQAPTWSP---SGRSLIFSR---KKDGDTGSKLYSI------DLNGRNETLINTP 434
             D +     WSP     R ++        D D  ++  ++      D  G     ++ P
Sbjct: 224 DLDGSASELHWSPVAGDSRLVVALAPTPTVDDDYMARKVTVVDTVANDGKGEVLARLDNP 283

Query: 435 AYASDPQWVG 444
                  W  
Sbjct: 284 GKLGQVTWSP 293



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 59/143 (41%), Gaps = 21/143 (14%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---------TKFSGEKF-A 372
            G    +     G   +++++ K A+    V SP G  +A+             G  F  
Sbjct: 34  GGVWNTFPAWGEGLTPQQVARLKLAT--GVVVSPDGGTVAYSLANPRIPGVDEDGPAFSH 91

Query: 373 IGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           + V    G+ +    +   +++ + +W+P G+ +    ++ GDT + LY I ++G     
Sbjct: 92  LWVADVQGTDKPRPFITGQASVSSLSWTPDGKGIAHLARRGGDTKTALYVIPIDGGEARK 151

Query: 431 INTP-------AYASDPQWVGFM 446
           +          A+++D + + F+
Sbjct: 152 LFEAETDLSGYAFSADGRQLAFL 174



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/289 (13%), Positives = 87/289 (30%), Gaps = 44/289 (15%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G   + L V D  G +      +    +    ++P+ + +A+      D      +   
Sbjct: 85  DGPAFSHLWVADVQGTDKPRPFITGQASVSSLSWTPDGKGIAHLARRGGDTKTALYVIPI 144

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---------------------- 283
                +++    + +    FS++G++    + K                           
Sbjct: 145 DGGEARKLFEAETDLSGYAFSADGRQLAF-LSKTPTPKQVEDRRNQGFVQEVYEDGLLPT 203

Query: 284 ---IYSVDLQS--NATERLTNTLFINISASYSP---DSSQIVFESDREGKEQLY------ 329
              + +++     NA  R  +         +SP   DS  +V  +     +  Y      
Sbjct: 204 RVGVVTMEPDGIINAKARYLDLDGSASELHWSPVAGDSRLVVALAPTPTVDDDYMARKVT 263

Query: 330 ---VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQ 382
               + ++G  +     D         WSP G  +            +  + V   +G  
Sbjct: 264 VVDTVANDGKGEVLARLDNPGKLGQVTWSPDGKTLGLISGQDVHDPSEGRLMVAPAEGGP 323

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              L+ D+ +    ++ +G  LI     D  T   L      G +ET++
Sbjct: 324 LVDLLPDAPIHVKAFAWNGNDLIAVSDDDLGTRISLIRRSQTGASETVL 372


>gi|310817472|ref|YP_003949830.1| hypothetical protein STAUR_0194 [Stigmatella aurantiaca DW4/3-1]
 gi|309390544|gb|ADO68003.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 741

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 58/316 (18%), Positives = 115/316 (36%), Gaps = 43/316 (13%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                   RLWD ++ KQ+ G     +    R  + T+S D  +++T   G    R+  +
Sbjct: 342 AGSKDATIRLWDTRNGKQVWG----VAEEEGRFHSVTLSADGTRAVT--SGSSGLRLWDI 395

Query: 181 SESVV--------------------SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRF 219
            +  V                    +    N+L +MD R G   R         +     
Sbjct: 396 PKEHVLAQTPYHPGLVALSADALFIAASGNNALWLMDTRSGQRFRLPLDGYGDEIETLSI 455

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   +A  +Y       V L     D +   +       +A  FS +G+R L S  +D
Sbjct: 456 SPDGGYIAAGSYSS----SVRLWKAGQDVSEDLVSGRGQPPVAVGFSQDGQRLL-SASRD 510

Query: 280 EAMDIY--SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             + ++            +L          + SP        S  +G  +L+ ++    +
Sbjct: 511 GVVRLWNPREPASGRILVKLPAGP---TVLATSPAG-PFAVLSGSDGVLRLWNLEEE-KE 565

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +R  ++  A+Y+  V+S  G  +   +   E+  + V + +  Q+   +E S  +  ++
Sbjct: 566 VRRYGEEGGAAYYPVVFSADGKRLFAAR---EEHGVDVWEVETGQQVKRLEPSGYEVTSF 622

Query: 398 SPSGRSLIFSRKKDGD 413
           + SG  +  +  +DG 
Sbjct: 623 AASGEVVA-AGTRDGH 637



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 60/354 (16%), Positives = 120/354 (33%), Gaps = 52/354 (14%)

Query: 119 EGKDRLRVEFRLWDVKDRKQIIG---------KKFFSSPASWRKIAHTISDD-------- 161
           +G + + +    +D +  K I G         +    S    R  A  I+D+        
Sbjct: 217 DGGNSIDI----FDTRSGKMIHGLTCPADSNLRTVVMSRDGSRIAA--IADEGPVWLGDG 270

Query: 162 ----IYQSITGEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQILFE 216
                 + ++  KG + S  L    + V+   +   + + D     +        Q + +
Sbjct: 271 SRKTRMRGLSKPKGRWLSVALSADGARVAAAGEQGWIQLWDTRSGRLLRTLRGNKQDVQD 330

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              S + + +   + D      + L DTR  +    +        +   S++G RA+ S 
Sbjct: 331 LALSADGRLLLAGSKDA----TIRLWDTRNGKQVWGVAEEEGRFHSVTLSADGTRAVTSG 386

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                + ++ +         L  T +     + S D+  I       G   L++M +   
Sbjct: 387 SSG--LRLWDIP----KEHVLAQTPYHPGLVALSADALFIA----ASGNNALWLMDTRSG 436

Query: 337 DQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            + R+  D      +    SP G  IA   +S     +    +D S++ +        A 
Sbjct: 437 QRFRLPLDGYGDEIETLSISPDGGYIAAGSYSSSV-RLWKAGQDVSEDLVSGRGQPPVAV 495

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY----ASDPQWVGF 445
            +S  G+ L+ S  +DG    +L++         L+  PA     A+ P    F
Sbjct: 496 GFSQDGQRLL-SASRDG--VVRLWNPREPASGRILVKLPAGPTVLATSPA-GPF 545



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 62/195 (31%), Gaps = 23/195 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F P+ Q V+       D  R++    R  R            ++   S +  R  I+   
Sbjct: 162 FLPDGQFVSAVA----DGGRLFAWSLRTRRQVSFTDYGYLHFVSAALS-DNHRLAIARDL 216

Query: 279 DEAMDIYSVDLQSNATER-LTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D    I   D +S      LT     N  +   S D S+I   +D        V   +GS
Sbjct: 217 DGGNSIDIFDTRSGKMIHGLTCPADSNLRTVVMSRDGSRIAAIADEGP-----VWLGDGS 271

Query: 337 DQKRIS--QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS---- 390
            + R+      +  +     S  G  +A     G      +   D    RLL        
Sbjct: 272 RKTRMRGLSKPKGRWLSVALSADGARVAAAGEQG-----WIQLWDTRSGRLLRTLRGNKQ 326

Query: 391 NLQAPTWSPSGRSLI 405
           ++Q    S  GR L+
Sbjct: 327 DVQDLALSADGRLLL 341


>gi|256379383|ref|YP_003103043.1| hypothetical protein Amir_5378 [Actinosynnema mirum DSM 43827]
 gi|255923686|gb|ACU39197.1| WD40 domain protein beta Propeller [Actinosynnema mirum DSM 43827]
          Length = 1066

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 60/176 (34%), Gaps = 32/176 (18%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + +         P +S +G R        EA                  +     S
Sbjct: 61  GEDQRALSGPDRGEAQPAYSPDGTRIAYVQWGVEAPP----------------SSATPSS 104

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A+ SP     V      G   L V  ++G+  + ++     +  +P WSP G  +A T  
Sbjct: 105 ATPSPAPGPPV-----TGFAGLVVANADGTSPRVLNPGIGGA--EPTWSPDGTKLAVTTE 157

Query: 367 SGEKFAIGVMK-KDGSQ----ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           +G    I V++  DG+            +    P WSP G ++ F+R+ DG     
Sbjct: 158 AG----IRVLRVADGAVLADVPAPPTLSARDSEPAWSPDGTTIAFTRRIDGQETPS 209



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            AP +S +G+R   + + +    + + +    +  R+ +    N    ++PD++ I+F+ 
Sbjct: 630 TAPAWSPDGQRLAYAHRAE---HLCTANADGTSATRIVSATGPN-HPEWTPDAAAILFDG 685

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           D +G+  ++ +  NG D   +    + +   
Sbjct: 686 DDDGRRAIWSVPPNGGDPVTLVSRADGAAHP 716



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 59/207 (28%), Gaps = 43/207 (20%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR--APKRIGNFRSMIL 261
           +      D+   +P +SP+  ++AY  +  E         +          +  F  +++
Sbjct: 64  QRALSGPDRGEAQPAYSPDGTRIAYVQWGVEAPPSSATPSSATPSPAPGPPVTGFAGLVV 123

Query: 262 A------------------PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           A                  P +S +G +  ++ +      I  + +   A   L +    
Sbjct: 124 ANADGTSPRVLNPGIGGAEPTWSPDGTKLAVTTEAG----IRVLRVADGAV--LADVPAP 177

Query: 304 ------NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-- 355
                 +   ++SPD + I F    +G+E       +      +        +    S  
Sbjct: 178 PTLSARDSEPAWSPDGTTIAFTRRIDGQET-----PSTGPYAVVGGTSPGGDYRTGVSLT 232

Query: 356 ----PQGDLIAFTKFSGEKFAIGVMKK 378
               P    I F   +       +   
Sbjct: 233 TDEVPNNPDIVFLLDNTGSMGGYIQDA 259



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 33/149 (22%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--------------- 367
           EG + ++   + G DQ+ +S   +     P +SP G  IA+ ++                
Sbjct: 49  EGGDDVHSANARGEDQRALS-GPDRGEAQPAYSPDGTRIAYVQWGVEAPPSSATPSSATP 107

Query: 368 --------GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                        + V   DG+  R+L        PTWSP G  L  +     + G ++ 
Sbjct: 108 SPAPGPPVTGFAGLVVANADGTSPRVLNPGIGGAEPTWSPDGTKLAVTT----EAGIRVL 163

Query: 420 SIDLNGRNETLINTP----AYASDPQWVG 444
            +  +G     +  P    A  S+P W  
Sbjct: 164 RV-ADGAVLADVPAPPTLSARDSEPAWSP 191



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 6/93 (6%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             P WSP G  +A+   +     +     DG+    +V  +    P W+P   +++F   
Sbjct: 630 TAPAWSPDGQRLAYAHRAE---HLCTANADGTSATRIVSATGPNHPEWTPDAAAILFDGD 686

Query: 410 KDGDTGSKLYSIDLNGR-NETLINTPAYASDPQ 441
            DG     ++S+  NG    TL++    A+ P 
Sbjct: 687 DDGRRA--IWSVPPNGGDPVTLVSRADGAAHPT 717



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 5/87 (5%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + ++SPD  ++ +       E L    ++G+   RI      ++  P W+P    I F 
Sbjct: 630 TAPAWSPDGQRLAYA---HRAEHLCTANADGTSATRIVSATGPNH--PEWTPDAAAILFD 684

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN 391
                + AI  +  +G     LV  ++
Sbjct: 685 GDDDGRRAIWSVPPNGGDPVTLVSRAD 711



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 6/81 (7%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +SP+ Q++AYA                   +  RI +       P ++ +    L   
Sbjct: 632 PAWSPDGQRLAYA-----HRAEHLCTANADGTSATRIVSATGPN-HPEWTPDAAAILFDG 685

Query: 277 QKDEAMDIYSVDLQSNATERL 297
             D    I+SV         L
Sbjct: 686 DDDGRRAIWSVPPNGGDPVTL 706



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           AP WSP G+ L ++          L + + +G + T I +    + P+W  
Sbjct: 631 APAWSPDGQRLAYA-----HRAEHLCTANADGTSATRIVSATGPNHPEWTP 676


>gi|126660841|ref|ZP_01731935.1| WD-40 repeat [Cyanothece sp. CCY0110]
 gi|126617892|gb|EAZ88667.1| WD-40 repeat [Cyanothece sp. CCY0110]
          Length = 1151

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 81/224 (36%), Gaps = 19/224 (8%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VV+    ++L +   +  +I  L    D +     +SP+ Q   +A+   ++ +R++   
Sbjct: 852  VVTASRDHTLKLWRPEEESIMLLRDHTDGVSTV-VYSPDGQ--FFASGSRDETVRLW--- 905

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            +      + +      +L    S + +    S   D  + ++  D      + +T     
Sbjct: 906  SNQGENFRTLKGHTDWVLTVAISPDSQFIA-SGGLDRTIKLWRKD--GTLIKTITGHSRG 962

Query: 304  NISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             +S  +SPD   +V      G++Q + + + +GS  K I +  E        SP G  I 
Sbjct: 963  VLSVDFSPDGQYLV----SGGRDQTIKIWRLDGSLVKTI-KGHEGPVESVAISPDGSKIV 1017

Query: 363  FTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLI 405
                      + +    G   +        +    +SP+G  + 
Sbjct: 1018 SGSRDTT---LKLWNWQGELLQSFETHQERVWTVAFSPNGEMIA 1058



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 104/299 (34%), Gaps = 37/299 (12%)

Query: 127 EFRLWDVKDRKQI---IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
             R+ D +  +++   +GK  + S    R   H              G +   I    + 
Sbjct: 519 RLRINDKETEQEVERALGKAVYGSLQFNRFTGHK------------DGVWGVDISGDGQM 566

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           +V+    ++L + +RDG  ++ LT   +++ ++ +FS N Q +A A+ D      + L  
Sbjct: 567 LVTASWDHTLKLWERDGKLLKTLTDHENRV-YKGKFSHNGQLIASASVDQ----TIKLWT 621

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                    +      +    FS + +  + +   D  + I++V  +     +L      
Sbjct: 622 IEGQLLRSLLTYKP--VYDVAFSPDDQTLIAATGHD--IQIWTV--EGKLLNKLKGHSAE 675

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                +S +    +  S    K+    + +      +  QD   + ++  WS        
Sbjct: 676 VYDVEFSHNGQFFLSSS----KDHTIKLWTKDGQLLKTFQDHNHTVWEVEWSENDSYFLS 731

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               G    I     DG+  + +      +    + P  R + FS     D   KL+++
Sbjct: 732 ASEDGT---IKQWTLDGNLIKTIFAHSGAVMDIEFVPK-RKVFFSA--GEDQTIKLWTV 784



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 54/136 (39%), Gaps = 9/136 (6%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VSG    ++ +   DG+ ++ +    +  +     SP+  K+   + D    L+++    
Sbjct: 976  VSGGRDQTIKIWRLDGSLVKTI-KGHEGPVESVAISPDGSKIVSGSRDT--TLKLWNWQ- 1031

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                  +     +  +    FS NG+    S   D+ +  +  DL+    + L     + 
Sbjct: 1032 --GELLQSFETHQERVWTVAFSPNGEMIA-SGSDDKTVRFW--DLEGQLIKTLYGYNSMI 1086

Query: 305  ISASYSPDSSQIVFES 320
             S ++SP+S Q+   S
Sbjct: 1087 RSIAFSPNSEQLAVGS 1102



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 11/118 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + +V  + R+   +L+       +   + +D        V+SP G   A     
Sbjct: 844 AFSPDQTHVV-TASRDHTLKLWR---PEEESIMLLRDHTDGVSTVVYSPDGQFFASGSRD 899

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                + +    G   R L   ++       SP  + +        D   KL+  D  
Sbjct: 900 ET---VRLWSNQGENFRTLKGHTDWVLTVAISPDSQFIA---SGGLDRTIKLWRKDGT 951


>gi|325000039|ref|ZP_08121151.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Pseudonocardia
           sp. P1]
          Length = 675

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 55/163 (33%), Gaps = 9/163 (5%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           ++      D  + +   +    +G  ++ +  +  DG   R L    D     PR SP+ 
Sbjct: 210 EAGFDVSPDGTTVVTAWNTPRGNGQRRSRIVAIGTDGGGHRDLLGGDDHEYSGPRVSPDG 269

Query: 224 QKVAY----ATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQK 278
           + VA      +  D       ++       P+ +   +     A R+  +    +++  +
Sbjct: 270 RTVAVLRESVSTPDTAPRTDLVLVPLAGGTPRPVAPGWDRWPSAVRWVPDASALVVTADE 329

Query: 279 DEAMDIYSVDLQSNA----TERLTNTLFINISASYSPDSSQIV 317
           D    ++ +DL +        RLT           SPD   + 
Sbjct: 330 DGRGPLFRIDLGAGPSDDVVTRLTGDHGCYTDPVPSPDGRWVY 372



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 44/316 (13%), Positives = 91/316 (28%), Gaps = 73/316 (23%)

Query: 201 ANIRYLTPSRDQILFEPRF-----SPNQQKVAYA-----TYDDEDILRVYLMDTRIDRAP 250
                     D  L  PR      SP+  ++        +        ++ +D   +  P
Sbjct: 4   QPAETPFHDLDAYLALPRLAGLALSPDGTRLVTGVAELESDGTRYRTALWEIDPAGEDPP 63

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMD--------IYSVDLQSNATERL-TNTL 301
           +R+    +    P F+  G     S + D            ++ +           T   
Sbjct: 64  RRLTRGAAGESGPVFTPGGDLLFRSARSDPDASGDGETPSGLWLLPAGGGEARPAGTRPG 123

Query: 302 FINI-------------SASY------SPDSSQIVFESDRE------------------G 324
            I+              S +       + D  +    S+ +                  G
Sbjct: 124 GIDDVVVAREAGTVVASSPTLPGAVTGADDERRRTARSEAKVSAILHTGHPVRHWDHDLG 183

Query: 325 KEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSG-----EKFAIGVMK 377
             ++ +++++G+D   ++     +        SP G  +     +       +  I  + 
Sbjct: 184 PAEVRLLRNDGADWTDLTPAPGRALDEAGFDVSPDGTTVVTAWNTPRGNGQRRSRIVAIG 243

Query: 378 KDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKK----DGDTGSKLYSIDLNGRNETLI 431
            DG   R L+   + +   P  SP GR++   R+     D    + L  + L G     +
Sbjct: 244 TDGGGHRDLLGGDDHEYSGPRVSPDGRTVAVLRESVSTPDTAPRTDLVLVPLAGGTPRPV 303

Query: 432 NTPAYASDPQ---WVG 444
             P +   P    WV 
Sbjct: 304 A-PGWDRWPSAVRWVP 318



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 68/196 (34%), Gaps = 36/196 (18%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--VFESDRE---GKEQLYV 330
           ++ D A           A     +    ++    SPD + +   + + R     + ++  
Sbjct: 190 LRNDGADWTDLTPAPGRAL----DEAGFDV----SPDGTTVVTAWNTPRGNGQRRSRIVA 241

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVMKKDGSQER 384
           + ++G   + +    +  Y  P  SP G  +A  + S        +  + ++   G   R
Sbjct: 242 IGTDGGGHRDLLGGDDHEYSGPRVSPDGRTVAVLRESVSTPDTAPRTDLVLVPLAGGTPR 301

Query: 385 LLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDL-----NGRNETLI----- 431
             V     + P+   W P   +L+ +  +DG     L+ IDL     +     L      
Sbjct: 302 -PVAPGWDRWPSAVRWVPDASALVVTADEDGRGP--LFRIDLGAGPSDDVVTRLTGDHGC 358

Query: 432 -NTPAYASDPQWVGFM 446
              P  + D +WV  +
Sbjct: 359 YTDPVPSPDGRWVYAL 374


>gi|258514165|ref|YP_003190387.1| copper amine oxidase domain-containing protein [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257777870|gb|ACV61764.1| copper amine oxidase domain protein [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 574

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/313 (15%), Positives = 99/313 (31%), Gaps = 57/313 (18%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F +R+ F S+          L ++D    +   ++ +         +S N + +AY   
Sbjct: 166 AFAARVAFTSDGH--------LWLVDGRQTDSTPISLTEAGPAEIVGWSSNGEWLAYLQS 217

Query: 232 DDEDIL--RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------KDEAM 282
           D  D    R YL   + D       + R + + P +S        + +        D  +
Sbjct: 218 DISDEYASRQYLWVVKADGTGAIQLDERPVYITPSWSPTENLLAYTTKDPQEEYIPDGNL 277

Query: 283 DIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSD 337
            I S  L++              I  S ++SPD   +     R  K   Q+  +   G  
Sbjct: 278 KISS--LKTGVVTTTSLWPQNSEIIESLAWSPDGQSLAISLPRNEKHPLQIDQITLKGDH 335

Query: 338 QKRISQDKEASYFDPV---------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
              ++  +     + +         WSP G  +A+            +  DG   ++L  
Sbjct: 336 TNLLTLGETGKMENEIYTRVATGLKWSPNGRYLAYYLKPNS----ASISADGVAMQVLNI 391

Query: 388 ----------EDSNLQAPTWSPSGRSLIF--SRKKDGDTGSKLYSIDLN-------GRNE 428
                       +  Q   W+P    L +     ++     +L+ +D+        G+  
Sbjct: 392 PQKKSIDLGCGLAYAQWLDWAPDSSQLAYIVGGGREATIQKRLHIVDVKTGQISDCGKTG 451

Query: 429 TLINTPAYASDPQ 441
            +   P + S P 
Sbjct: 452 QVDTQPRWLSTPA 464



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 97/282 (34%), Gaps = 50/282 (17%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--------- 258
           P   +I+    +SP+ Q +A +   +E         T        +    +         
Sbjct: 294 PQNSEIIESLAWSPDGQSLAISLPRNEKHPLQIDQITLKGDHTNLLTLGETGKMENEIYT 353

Query: 259 -MILAPRFSSNGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +    ++S NG+     ++ +      + + +  +++    +  L   L       ++P
Sbjct: 354 RVATGLKWSPNGRYLAYYLKPNSASISADGVAMQVLNIPQKKSIDLGCGLAYAQWLDWAP 413

Query: 312 DSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEAS--YFDPVW-SPQGDLIAF 363
           DSSQ+ +     G+E     +L+++        +IS   +       P W S     I F
Sbjct: 414 DSSQLAYIVG-GGREATIQKRLHIVDVKTG---QISDCGKTGQVDTQPRWLSTPASGILF 469

Query: 364 TKFSGE--------------KFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFS 407
            + +                   I     DG +  +     D+   AP  SP G+ L+F 
Sbjct: 470 CRGTETLDWEGQEQAGVLVPGQRIWHRTADGKELDVTSGPVDTADYAPHLSPDGQGLLFL 529

Query: 408 RKKDGDTGSKLYSIDLNGRNETLI----NTPAYASD--PQWV 443
           R  + + GS  Y     G  + LI      P Y  +  P+W+
Sbjct: 530 RLTNYNCGSLYYQPMAGGPPKELIRGISGQPGYYGNYYPEWI 571


>gi|17227743|ref|NP_484291.1| WD-40 repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17135225|dbj|BAB77771.1| WD-40 repeat protein [Nostoc sp. PCC 7120]
          Length = 304

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 71/207 (34%), Gaps = 14/207 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK--RIGNFRSMILA 262
                    +    FSP+ Q++A  + D    +RV+ +        K     ++   + +
Sbjct: 8   RTLKGHSDKVMSVMFSPDGQRLASGSAD--KTVRVWNLANEETLILKGHGKSSWSGGVNS 65

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             FS NGK    S   D+ + ++ V+         T       S S+SPD   +V  S  
Sbjct: 66  IAFSPNGKTLA-SASDDKTIKLWDVN-TGAEIIAFTGHEEAVYSVSFSPDGKTLVSGSK- 122

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              + + +       +    +          +SP G ++A +  +G    I +      +
Sbjct: 123 --DKSVKLWSLATGRELYSLKGHLDDVLSVAFSPDGQVVA-SGGAGNDKTIKIWHLAKQK 179

Query: 383 ERLLVED----SNLQAPTWSPSGRSLI 405
            + +         + +  +SP G  L 
Sbjct: 180 VQTITGHSEWFGGINSLAFSPDGNILA 206



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 83/231 (35%), Gaps = 14/231 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ S     ++ + D +           ++ ++   FSP+ + +   + D      V L
Sbjct: 73  KTLASASDDKTIKLWDVNTGAEIIAFTGHEEAVYSVSFSPDGKTLVSGSKDK----SVKL 128

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                 R    +      +L+  FS +G+    S        I    L     + +T   
Sbjct: 129 WSLATGRELYSLKGHLDDVLSVAFSPDGQVVA-SGGAGNDKTIKIWHLAKQKVQTITGHS 187

Query: 302 ----FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                IN S ++SPD + +   S     + + + Q   S++               +SP 
Sbjct: 188 EWFGGIN-SLAFSPDGNILASGS---WDKNIKLWQWQNSEEICTLTGHSDHVCCVSFSPN 243

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           G+++A +    +   +  +         +V + ++ +  +SP G++L  S 
Sbjct: 244 GNILA-SASKDKSIKLWQVDTRSIISSFIVHEESVYSLAFSPDGQTLASSS 293



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 80/240 (33%), Gaps = 28/240 (11%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            +LWDV    +II   F     +           +Y       G          +++VSG
Sbjct: 84  IKLWDVNTGAEIIA--FTGHEEA-----------VYSVSFSPDG----------KTLVSG 120

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               S+ +         Y        +    FSP+ Q VA     ++  ++++ +  +  
Sbjct: 121 SKDKSVKLWSLATGRELYSLKGHLDDVLSVAFSPDGQVVASGGAGNDKTIKIWHLAKQKV 180

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +       +   I +  FS +G   L S   D+ + ++     S     LT         
Sbjct: 181 QTITGHSEWFGGINSLAFSPDGN-ILASGSWDKNIKLWQ-WQNSEEICTLTGHSDHVCCV 238

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SP+ + +   S     + + + Q +           E S +   +SP G  +A +   
Sbjct: 239 SFSPNGNILASASK---DKSIKLWQVDTRSIISSFIVHEESVYSLAFSPDGQTLASSSGD 295



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 65/176 (36%), Gaps = 13/176 (7%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFI 303
             + +      +++  FS +G+R   S   D+ + ++  +L +  T  L     ++    
Sbjct: 6   FVRTLKGHSDKVMSVMFSPDGQRLA-SGSADKTVRVW--NLANEETLILKGHGKSSWSGG 62

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SP+   +   SD    + + +   N   +       E + +   +SP G  +  
Sbjct: 63  VNSIAFSPNGKTLASASD---DKTIKLWDVNTGAEIIAFTGHEEAVYSVSFSPDGKTLV- 118

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +    +   +  +        L     ++ +  +SP G+ +  S     D   K++
Sbjct: 119 SGSKDKSVKLWSLATGRELYSLKGHLDDVLSVAFSPDGQVVA-SGGAGNDKTIKIW 173


>gi|119716170|ref|YP_923135.1| periplasmic component of the Tol biopolymer transport system-like
           [Nocardioides sp. JS614]
 gi|119536831|gb|ABL81448.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Nocardioides sp. JS614]
          Length = 593

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 75/266 (28%), Gaps = 75/266 (28%)

Query: 218 RFSPNQQKVAYATYDDED------------ILRVYLMDTRIDRAPKRIGNFRSM------ 259
            +SP+   +A+++   +               +++      D       +          
Sbjct: 305 SWSPDATWIAFSSKFVDGCATDPCPGNTNFSWQMFAWQVGTDTYVPVSADASGALPSDGS 364

Query: 260 ----ILAPRFSSNGKRALISV--------QKDEAMDIYSVDLQSNATERLTNTLF----- 302
                  P +S +  R               +   D++  ++ + A  R + +       
Sbjct: 365 GPLDASDPTWSPDSTRVAFVSASHELVPGDTNVNRDVFVKNVYTGAIVRASVSAGGAQAD 424

Query: 303 -INISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQDKEASY---- 349
             +   +++P  +++ + S        D    + ++V          +S      +    
Sbjct: 425 NYSGDPAFAPTGNRLAYSSAATNLVPGDDNSAQDVFVKNLATGAVSAVSVRPNGQFVVSP 484

Query: 350 ---FDPVWSPQGDLIAFTKFS---------GEKFAIGVMKKDGSQERLL---------VE 388
                P WSP G  I FT  +           +  + V        +L+           
Sbjct: 485 DGSRTPAWSPDGTKILFTSQAFALVDRADKNVEDDVYVKDLASQGLQLVSVRPDGTNGTS 544

Query: 389 DSNLQA------PTWSPSGRSLIFSR 408
            S L        P W+P GRS+ F  
Sbjct: 545 SSTLFGMVGSAGPAWAPDGRSVFFLS 570



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 73/268 (27%), Gaps = 76/268 (28%)

Query: 253 IGNFRSMILAPRFSSNGKRALISV------------------------QKDEAMDIYSVD 288
           +G   + +    +S +      S                         Q      +    
Sbjct: 294 VGYIAAAVSDASWSPDATWIAFSSKFVDGCATDPCPGNTNFSWQMFAWQVGTDTYVPVSA 353

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKR 340
             S A     +        ++SPDS+++ F S        D      ++V         R
Sbjct: 354 DASGALPSDGSGPLDASDPTWSPDSTRVAFVSASHELVPGDTNVNRDVFVKNVYTGAIVR 413

Query: 341 ISQDKEASY-----FDPVWSPQGDLIAFTK--------FSGEKFAIGVMKKDGSQE---- 383
            S     +       DP ++P G+ +A++                + V            
Sbjct: 414 ASVSAGGAQADNYSGDPAFAPTGNRLAYSSAATNLVPGDDNSAQDVFVKNLATGAVSAVS 473

Query: 384 -----RLLVEDSNLQAPTWSPSGRSLIFSR-------KKDGDTGSKLYSIDLNGRNETLI 431
                + +V     + P WSP G  ++F+        + D +    +Y  DL  +   L+
Sbjct: 474 VRPNGQFVVSPDGSRTPAWSPDGTKILFTSQAFALVDRADKNVEDDVYVKDLASQGLQLV 533

Query: 432 N-----TPAYASD----------PQWVG 444
           +     T   +S           P W  
Sbjct: 534 SVRPDGTNGTSSSTLFGMVGSAGPAWAP 561



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/315 (14%), Positives = 85/315 (26%), Gaps = 82/315 (26%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDE--------------DILRVYLMDTRIDRAPKRIGN 255
               +     SP+ + VA+ +                    L    +      A   +GN
Sbjct: 182 NGSSVNSASVSPDGRYVAFWSNATNLSPDASDGLMHLFVKSLATGAIGVADTSASGVLGN 241

Query: 256 FRSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS------ 306
                   R   +       L +   +  +D +++D   +    L      + S      
Sbjct: 242 DNGYTGEARVIGWKPGSHELLFTTYANNLIDGFTLD--GSYAPFLMAKSIDDGSVGYIAA 299

Query: 307 ----ASYSPDSSQIVFESD-----------------------REGKEQLYVMQSNGSDQK 339
               AS+SPD++ I F S                        + G +    + ++ S   
Sbjct: 300 AVSDASWSPDATWIAFSSKFVDGCATDPCPGNTNFSWQMFAWQVGTDTYVPVSADASGAL 359

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGE--------KFAIGVMKKDGSQERLLV---- 387
                      DP WSP    +AF   S E           + V                
Sbjct: 360 PSDGSGPLDASDPTWSPDSTRVAFVSASHELVPGDTNVNRDVFVKNVYTGAIVRASVSAG 419

Query: 388 ---EDSNLQAPTWSPSGRSLIFSRKK------DGDTGSKLYSIDLNGR---------NET 429
               D+    P ++P+G  L +S         D ++   ++  +L            N  
Sbjct: 420 GAQADNYSGDPAFAPTGNRLAYSSAATNLVPGDDNSAQDVFVKNLATGAVSAVSVRPNGQ 479

Query: 430 LINTPAYASDPQWVG 444
            + +P  +  P W  
Sbjct: 480 FVVSPDGSRTPAWSP 494


>gi|288916486|ref|ZP_06410863.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EUN1f]
 gi|288352086|gb|EFC86286.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EUN1f]
          Length = 891

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 88/258 (34%), Gaps = 22/258 (8%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V DR   +      +    + +  FSP+ + +A  +YD      V L D R    P+++ 
Sbjct: 586 VTDRSHPHELATLTAHSAWVLDAAFSPDGKLLATVSYDR----TVRLWDIRDLSQPRQLA 641

Query: 255 ---NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYS 310
                   +L   FS NG+    S   + A      + +S +    L          S+S
Sbjct: 642 VLLGHDGYVLDAAFSPNGQILATSGYDNTARLWDIRNPESPHQLAVLNRHTSWVNEVSFS 701

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGE 369
           P+   +   +  +   +L+ +    S +   +      Y +   +SP G  +A   + G 
Sbjct: 702 PNGKVLA-TASADHTARLWDISDPSSPRPLAAITAHTDYVWAVAFSPDGKQLATGAYDGL 760

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                V     ++ R        +   +    SP G +L        DT + L+ +   G
Sbjct: 761 VKLWDVTDP--ARPRATASIEADEKWVFDLAYSPDGHTLA---TAGWDTTAHLWDLSAPG 815

Query: 426 RNETLINTPAYASDPQWV 443
           +   +      +    WV
Sbjct: 816 K---VTAAGVISGHGDWV 830



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 70/178 (39%), Gaps = 12/178 (6%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISAS 308
             +      +L    S +G+    +   D  + ++ V  +S+      LT      + A+
Sbjct: 551 TVLTGHTESVLGLGVSPSGRTVA-TGGADNLVRLWDVTDRSHPHELATLTAHSAWVLDAA 609

Query: 309 YSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +SPD   +   S  +   +L+ +   +   Q  +    +    D  +SP G ++A + + 
Sbjct: 610 FSPDGKLLATVSY-DRTVRLWDIRDLSQPRQLAVLLGHDGYVLDAAFSPNGQILATSGYD 668

Query: 368 GEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                +  ++   S  +L V     S +   ++SP+G+ L  +     D  ++L+ I 
Sbjct: 669 NTA-RLWDIRNPESPHQLAVLNRHTSWVNEVSFSPNGKVLATAS---ADHTARLWDIS 722



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 62/184 (33%), Gaps = 11/184 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       + E  FSPN + +A A+ D    L   + D    R    I      + A  F
Sbjct: 687 VLNRHTSWVNEVSFSPNGKVLATASADHTARLW-DISDPSSPRPLAAITAHTDYVWAVAF 745

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN----ISASYSPDSSQIVFESD 321
           S +GK+   +   D  + ++  D+   A  R T ++  +       +YSPD   +   + 
Sbjct: 746 SPDGKQLA-TGAYDGLVKLW--DVTDPARPRATASIEADEKWVFDLAYSPDGHTLA-TAG 801

Query: 322 REGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +    L+ + + G      +            + P G+ +           I  +   G
Sbjct: 802 WDTTAHLWDLSAPGKVTAAGVISGHGDWVQGVEFMPNGESLVTISDDYTT-RISRIDDAG 860

Query: 381 SQER 384
              R
Sbjct: 861 LVAR 864


>gi|288927518|ref|ZP_06421365.1| dipeptidyl-peptidase IV [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330352|gb|EFC68936.1| dipeptidyl-peptidase IV [Prevotella sp. oral taxon 317 str. F0108]
          Length = 734

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 91/254 (35%), Gaps = 49/254 (19%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
                 + S + Q++   ++     + V           +++ +F S IL    S +G R
Sbjct: 47  GTDLYAQISDDGQRIVRYSFKTGKQVDVLFDVNDTQG--QKVKSFDSYIL----SPDGTR 100

Query: 272 ALIS------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            LI        ++      Y   + S   ++L++      + ++SPDS Q+ F  D    
Sbjct: 101 ILICTNPKKIYRRTFKATYYIYTVASRRLDKLSDG-GPQQNPTWSPDSRQVAFVRD---N 156

Query: 326 EQLYVMQSNGSDQKRISQDKEAS---YFDPVW--------------SPQGDLIAFTKFSG 368
               V     + + ++++D + +      P W              +  G +I + ++  
Sbjct: 157 NIFLVKLLYDNAESQVTKDGKLNEVINGVPDWVNEEEFGISSSLVFNADGTMICWVRYDE 216

Query: 369 EK---FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK--LYSIDL 423
           +    F++ +      Q +      N   P++        +   K G+  +K  ++S D+
Sbjct: 217 KDVKTFSLQMY-----QGQYPSHKENQTYPSF------FAYKYPKAGEDNAKVSVWSFDI 265

Query: 424 NGRNETLINTPAYA 437
             R    ++ P  A
Sbjct: 266 KSRQTRKLDVPLDA 279



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 17/150 (11%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             ++ A  S D  +IV  S + GK+   +   N +  +++      S+   + SP G  I
Sbjct: 47  GTDLYAQISDDGQRIVRYSFKTGKQVDVLFDVNDTQGQKVK-----SFDSYILSPDGTRI 101

Query: 362 AFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                  + +         +      +   L +    Q PTWSP  R + F R  +    
Sbjct: 102 LICTNPKKIYRRTFKATYYIYTVASRRLDKLSDGGPQQNPTWSPDSRQVAFVRDNNIFLV 161

Query: 416 SKLYS-----IDLNGR-NETLINTPAYASD 439
             LY      +  +G+ NE +   P + ++
Sbjct: 162 KLLYDNAESQVTKDGKLNEVINGVPDWVNE 191



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 46/393 (11%), Positives = 118/393 (30%), Gaps = 79/393 (20%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F+      +   I        +   +  G +++   R   +   ++ V F + D + +
Sbjct: 32  GTFSP----EYISGIKPIAGTDLYAQISDDGQRIV---RYSFKTGKQVDVLFDVNDTQGQ 84

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           K      +  SP   R +  T    IY+          +  ++   S     +       
Sbjct: 85  KVKSFDSYILSPDGTRILICTNPKKIYRRTFK-----ATYYIYTVASRRLDKL------- 132

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
             DG   +            P +SP+ ++VA+   ++     ++L+    D A  ++   
Sbjct: 133 -SDGGPQQ-----------NPTWSPDSRQVAFVRDNN-----IFLVKLLYDNAESQVTKD 175

Query: 257 R------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
                               +  +  F+++G         ++ +  +S+ +      +  
Sbjct: 176 GKLNEVINGVPDWVNEEEFGISSSLVFNADGTMICWVRYDEKDVKTFSLQMYQG---QYP 232

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVW 354
           +        S+        ++  + G++     ++         +++    +A  + P  
Sbjct: 233 SHKENQTYPSF------FAYKYPKAGEDNAKVSVWSFDIKSRQTRKLDVPLDADGYIPRI 286

Query: 355 ----SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------TWSPSGRSL 404
               +    L+       +   +  +    +  +LLV +   +          S    S 
Sbjct: 287 KTTNNADMILVYTMNRHQDMLNVYTVNPRSTVAQLLVREKGDKYVKEEAIANISVYNNSF 346

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           +    +DG     LY  D+ G+    I    Y 
Sbjct: 347 LLPSDRDGYM--HLYLYDMGGKQIRKIGDGNYD 377


>gi|145551644|ref|XP_001461499.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124429333|emb|CAK94126.1| unnamed protein product [Paramecium tetraurelia]
          Length = 540

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 88/287 (30%), Gaps = 22/287 (7%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R   H    ++Y+        ++  I     ++ S     S+ + D      +       
Sbjct: 208 RIQIH----ELYKLEGHISNVYSVCISSDGTTLASSSADKSIRLWDIKTGQQKAKLDGHS 263

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +     S +   +A  +YD      + L      +   ++      +++  FS +G  
Sbjct: 264 DNVRSVCVSLDGNTLASCSYDK----TICLWSIWTRKIILKLQGHSQSVISVCFSPDGST 319

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                       I   + ++     +         S  +S D + +   S+    + + +
Sbjct: 320 LA---SGSGDKSICLWNTRTGQQRAKFKGHNGSVNSICFSTDGTTLASGSE---DQTIRL 373

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                  QK              +SP G  +A +  S     +  ++    + +L   + 
Sbjct: 374 WDVFTKQQKTKLIGHNGGVNAVCFSPDGTTLA-SGSSDNFICLWDVRTTLQKAKLDGHNG 432

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            + +  +S  G +L       G+  + ++  D N   +  +    ++
Sbjct: 433 CVNSLCFSKDGTTLA-----SGNANNSIHLWD-NKTGQQKVKLGGHS 473



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 85/259 (32%), Gaps = 35/259 (13%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             RLWD+K  +Q                 H  SD++        G           ++ S
Sbjct: 244 SIRLWDIKTGQQKAKLD-----------GH--SDNVRSVCVSLDG----------NTLAS 280

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                ++C+       I        Q +    FSP+   +A  + D      + L +TR 
Sbjct: 281 CSYDKTICLWSIWTRKIILKLQGHSQSVISVCFSPDGSTLASGSGDK----SICLWNTRT 336

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +   +       + +  FS++G     S  +D+ + ++ V  +   T+ + +   +N  
Sbjct: 337 GQQRAKFKGHNGSVNSICFSTDGTTLA-SGSEDQTIRLWDVFTKQQKTKLIGHNGGVNAV 395

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPD + +   S       + +     + QK              +S  G  +A    
Sbjct: 396 -CFSPDGTTLASGSS---DNFICLWDVRTTLQKAKLDGHNGCVNSLCFSKDGTTLA---S 448

Query: 367 SGEKFAIGVMKKDGSQERL 385
                +I +      Q+++
Sbjct: 449 GNANNSIHLWDNKTGQQKV 467


>gi|307565919|ref|ZP_07628378.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           amnii CRIS 21A-A]
 gi|307345347|gb|EFN90725.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           amnii CRIS 21A-A]
          Length = 713

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/386 (12%), Positives = 126/386 (32%), Gaps = 89/386 (23%)

Query: 135 DRKQIIGKK--FFSSPASWRKIAHTI-SDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           + +Q++ +   +        ++   + +D     +  +     +  +++  + ++ + K 
Sbjct: 50  NGRQVVYQVGYYSVKENKGHQVIRVMDADGKNDRLLTKLSSNETDPIWIDNNTIAYLSKG 109

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------YATYDDEDI--------- 236
            L VM  +G N + L+ S   I    +FSP+++ V       Y     ++          
Sbjct: 110 QLWVMSANGDNRKQLSHSSIDIEGF-KFSPDRKHVVLLKSIPYYGTIKKNPADLPKASGM 168

Query: 237 ------LRVYLMDTRIDRAP-----KRIGNFRSMIL----------AP-------RFSSN 268
                  R +    + +  P        G    + +          AP        +S +
Sbjct: 169 VITDMNYRHWDHYVQTNTHPFLSEVSDKGVSEGIDIMEGEPFESPLAPFGGIEQIAWSKD 228

Query: 269 GKRALISVQKDEA--------MDIYSVDLQSNATERL-------------TNTL------ 301
            K+   + +K E          DIY  D+ +  T  L             T ++      
Sbjct: 229 SKKIAYTSRKREGVKYAISTDADIYLYDIATKNTVNLCKPVGYKEPEIDATKSMRAQKVN 288

Query: 302 --------FINISASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEAS 348
                     +++  +SPD   I ++S         + +L VM+     +  +++  +++
Sbjct: 289 SQSGDMQVGYDVNPQFSPDGRYIAWQSMKNNGYESDRNRLCVMELATGKKVYVTEKFDSN 348

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSLIFS 407
                W+     + F         +      G  ++L     +  +       G+ L+ +
Sbjct: 349 VDGFTWAANSKDLYFYGCWHACVNLYQTNLKGEVKQLTTGQHDYTSVALLGDAGKKLL-A 407

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINT 433
            ++     + +Y +  + + +  + T
Sbjct: 408 IRQSMSAPADIYVVTPSKKEKASVQT 433



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 83/258 (32%), Gaps = 64/258 (24%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATE 295
           +    +     +      I + + S NG++ +  V      +      I  +D       
Sbjct: 24  ISLSSNVMTPEVLWAMGRITSAQSSPNGRQVVYQVGYYSVKENKGHQVIRVMDADGKNDR 83

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            LT          +  D++ I + S    K QL+VM +NG ++K++S           +S
Sbjct: 84  LLTKLSSNETDPIWI-DNNTIAYLS----KGQLWVMSANGDNRKQLSH-SSIDIEGFKFS 137

Query: 356 PQGDLIA------------------------------------FTKFSGEKFAIGVMKKD 379
           P    +                                     + + +   F   V  K 
Sbjct: 138 PDRKHVVLLKSIPYYGTIKKNPADLPKASGMVITDMNYRHWDHYVQTNTHPFLSEVSDKG 197

Query: 380 GSQERLLVEDSNLQAP----------TWSPSGRSLIF-SRKKDG-----DTGSKLYSIDL 423
            S+   ++E    ++P           WS   + + + SRK++G      T + +Y  D+
Sbjct: 198 VSEGIDIMEGEPFESPLAPFGGIEQIAWSKDSKKIAYTSRKREGVKYAISTDADIYLYDI 257

Query: 424 NGRNETLINTPAYASDPQ 441
             +N   +  P    +P+
Sbjct: 258 ATKNTVNLCKPVGYKEPE 275


>gi|307155260|ref|YP_003890644.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306985488|gb|ADN17369.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 1449

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/283 (14%), Positives = 99/283 (34%), Gaps = 14/283 (4%)

Query: 153  KIAHTISDDIYQSITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
            K+ H  S +   ++TG +    S      S+++ SG   +++ + +       +      
Sbjct: 1152 KLWHYKSGECLYTLTGHQSQVRSVAFAPDSQTLASGSDDHTVKLWNYKSGECLHTLTGHQ 1211

Query: 212  QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++   F+P+ Q +A  + D      V L + +       +   +  + +  F+ + + 
Sbjct: 1212 SRVYSVAFAPDSQTLASGSDDH----TVKLWNYKSGECLHTLTGHQRWVYSVAFAPDSQT 1267

Query: 272  ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
               S   D  + +++    S     LT       + +++PD+  +   S       + + 
Sbjct: 1268 LA-SGSWDNTVKLWNY-KSSECLHTLTGHDRGIRAVAFAPDNQTLASGS---WDNTVKLW 1322

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                S+         +      ++P    +A +    +   +   K       L    S 
Sbjct: 1323 NYKSSECLHTLTGHRSGVNSVAFAPDSQTLA-SGSEDKTVKLWNYKSGECLHTLTGHRSR 1381

Query: 392  LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            + +  +SP GR L  +     D   K++ +      +TL N P
Sbjct: 1382 VNSVAFSPDGRLLASASV---DATIKIWDVKTGQCLKTLDNRP 1421



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/280 (12%), Positives = 97/280 (34%), Gaps = 23/280 (8%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +   ++      S+++ SG   +++ + +       +        ++   F+P+ + +A
Sbjct: 958  HQSWVYSVAFAPDSQTLGSGSDDHTVKLWNYQSGECLHTLTGHQSPVYSVAFAPDGETLA 1017

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              ++D+     V L + +       +   +S + +  F+ + +    S   D  + ++  
Sbjct: 1018 SGSWDN----TVKLWNYKSGEYLHTLTGHQSPVRSVAFAPDSQTLA-SGSDDHTVKLWHY 1072

Query: 288  DLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
              QS      LT       S +++ +S  +   SD      + +      +        +
Sbjct: 1073 --QSGECLHTLTGHQSPVYSVAFASNSQTLASGSD---DHTVKLWHYKSGECLYTLTGHQ 1127

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                   ++P    +A          +   K       L    S +++  ++P  ++L  
Sbjct: 1128 RGVRSVAFAPDSQTLASVS-DDHTVKLWHYKSGECLYTLTGHQSQVRSVAFAPDSQTLAS 1186

Query: 407  SRKKDGDTGSKLYSI-------DLNGRNETLINTPAYASD 439
                  D   KL++         L G +++ + + A+A D
Sbjct: 1187 GSD---DHTVKLWNYKSGECLHTLTG-HQSRVYSVAFAPD 1222



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 49/148 (33%), Gaps = 8/148 (5%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             + +  FS++GK    +      + I++          LT       S +++PDS  + 
Sbjct: 834 GAVYSVAFSADGKLLA-TGDSHGVIRIWNT-ASRKELLTLTGHQSWVYSVAFAPDSQTLA 891

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S+      + +      +        +       ++P    +A +        +   K
Sbjct: 892 SGSE---DNTVKLWNYQSGECLHTLTGHQKGVRSVAFAPDSQTLA-SGSDDHTVKLWNYK 947

Query: 378 KDGSQERLLV-EDSNLQAPTWSPSGRSL 404
             G   R L    S + +  ++P  ++L
Sbjct: 948 -SGECLRTLTGHQSWVYSVAFAPDSQTL 974


>gi|209522697|ref|ZP_03271255.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
 gi|209496746|gb|EDZ97043.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
          Length = 806

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/267 (17%), Positives = 94/267 (35%), Gaps = 27/267 (10%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG   N++ + + + G NI  LT     IL    FS +  ++A  T    +  R+   + 
Sbjct: 541 SGSRDNTIKLWNTQTGENISTLTGDGSAILSV-NFSSDGIELASGT----EFWRILEWNL 595

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFI 303
           +       +    + IL  + S N +    S   D  + ++  D ++       T     
Sbjct: 596 QTRELYLPL-EHSAPILTVQISPNNRNIA-SGSADNTVRVW--DRRTGQVLYNHTQHSET 651

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + ++SP+   +V  S   G   ++V+     + +   Q           +P G  I  
Sbjct: 652 VYALAFSPNGRWLVTGS---GDRTVHVIDLEMRELRHRLQGHNGEVRAVAITPDGQNIIS 708

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    I +      QE + +     +  +   SP    +  S    GD   ++++ 
Sbjct: 709 GSSDNT---IKIWDLQTGQETITLTGHQGEILSVAVSPDASQIASSS---GDRTVRIWN- 761

Query: 422 DLNGRNE-TLINTPAYASDPQWVGFMD 447
              G    TL + PA  +    V F++
Sbjct: 762 RATGELLNTLTDIPAVINS---VFFLN 785



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 64/157 (40%), Gaps = 11/157 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++ SG   N++ V DR    + Y      + ++   FSPN + +   + D      V++
Sbjct: 620 RNIASGSADNTVRVWDRRTGQVLYNHTQHSETVYALAFSPNGRWLVTGSGDR----TVHV 675

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
           +D  +     R+      + A   + +G+   IS   D  + I+  DLQ+      LT  
Sbjct: 676 IDLEMRELRHRLQGHNGEVRAVAITPDGQNI-ISGSSDNTIKIW--DLQTGQETITLTGH 732

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               +S + SPD+SQI   S   G   + +      +
Sbjct: 733 QGEILSVAVSPDASQIASSS---GDRTVRIWNRATGE 766


>gi|217077800|ref|YP_002335518.1| hypothetical protein THA_1743 [Thermosipho africanus TCF52B]
 gi|217037655|gb|ACJ76177.1| conserved hypothetical protein [Thermosipho africanus TCF52B]
          Length = 389

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 98/276 (35%), Gaps = 29/276 (10%)

Query: 161 DIYQSIT-----GEKGDF-NSRILFVSESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQI 213
           D Y  +T      E GDF + + LF+++ +        +     D  N +  L P     
Sbjct: 130 DNYLRLTFYPGVDEYGDFKDGKFLFITDRLGGNRNLAYI-----DIQNEKITLLPVWSSS 184

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS---NGK 270
            + PRFSP+ + + +      +   +Y M   +    K+I       L P ++    +  
Sbjct: 185 EYYPRFSPDMKMLLFQGSLHGN-WSIYTMPFGVSDYSKKIKKISDSNL-PSYTPVWYDND 242

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             L     ++   +   ++ +   +++ N     +   +  D + I + S       +Y 
Sbjct: 243 NVLYIQDTEKGNVMIMANIYNGK-KQVLNVYGDMVFTPFVYDGN-IYYTSLNGANFGIYK 300

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
              +G + K   +D   +  DPV     + + FT      + I +   D S    L  D 
Sbjct: 301 Y-VDGKNFKV--EDSFYNEHDPVI--YKNKLVFTSNRDGIYRIWMKDLDTSSVTCLTSDI 355

Query: 391 NLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           N     PT S  G  L+F           ++   L+
Sbjct: 356 NYDVFYPTVS-DG--LLFFSVYKDGEEPDIFVKKLD 388



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 103/312 (33%), Gaps = 67/312 (21%)

Query: 179 FVSESVVSGIIKNSLCV---MDRDGANIRYLTPSRD-QILFEPRFSPNQ--------QKV 226
           +V     S  +     V   +  D  N  Y    +D   +    +SP          +++
Sbjct: 52  YVKFINSSSDLTCDYYVNLYLTYDSTNNLYKATYKDFDYIVSSVYSPKGYKKYSTFLEEI 111

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y   +    + +  +  R      R+  +  +     F  +GK   I+ +     ++  
Sbjct: 112 VYYPLEK---ISINKLKRRDFDNYLRLTFYPGVDEYGDF-KDGKFLFITDRLGGNRNLAY 167

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDK 345
           +D+Q+     L           +SPD   ++F+    G   +Y M    SD  K+I +  
Sbjct: 168 IDIQNEKITLLPVWSSSEYYPRFSPDMKMLLFQGSLHGNWSIYTMPFGVSDYSKKIKKIS 227

Query: 346 EASY--FDPVW---------------------------------------SP---QGDLI 361
           +++   + PVW                                       +P    G+ I
Sbjct: 228 DSNLPSYTPVWYDNDNVLYIQDTEKGNVMIMANIYNGKKQVLNVYGDMVFTPFVYDGN-I 286

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +T  +G  F I     DG   ++     N   P    +   L+F+  +DG    +++  
Sbjct: 287 YYTSLNGANFGIYKY-VDGKNFKVEDSFYNEHDPVIYKN--KLVFTSNRDG--IYRIWMK 341

Query: 422 DLNGRNETLINT 433
           DL+  + T + +
Sbjct: 342 DLDTSSVTCLTS 353


>gi|253702129|ref|YP_003023318.1| hypothetical protein GM21_3539 [Geobacter sp. M21]
 gi|251776979|gb|ACT19560.1| conserved hypothetical protein [Geobacter sp. M21]
          Length = 449

 Score = 68.9 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 57/144 (39%), Gaps = 22/144 (15%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLIAFTK 365
           +PD   + F     G + +   +  G   + +   K  +         +SP G  IA++ 
Sbjct: 60  APDGLIVFF---HPGGKGVAYTRKEGEGVRLVHDGKVGAPVASIDALAFSPDGKRIAYSA 116

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             G+K+ + V    G       +      P++SP  R + +     G   +  +SI ++G
Sbjct: 117 MVGKKWRVFVDGAAGVDSEQTTD------PSFSPDSRHVAY-----GVKTAAGWSIVIDG 165

Query: 426 R----NETLINTPAYASDPQWVGF 445
           R    N+  +  P ++SD   + F
Sbjct: 166 RLTQMNKAFLGNPVFSSDSSKIAF 189



 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 51/257 (19%), Positives = 94/257 (36%), Gaps = 42/257 (16%)

Query: 200 GANIRYLTPSRDQILFEP----RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           G  +R +   +            FSP+ +++AY+    +   RV++       + +    
Sbjct: 82  GEGVRLVHDGKVGAPVASIDALAFSPDGKRIAYSAMVGKK-WRVFVDGAAGVDSEQ---- 136

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSS 314
                  P FS + +     V K  A     +D       RLT        +  +S DSS
Sbjct: 137 ----TTDPSFSPDSRHVAYGV-KTAAGWSIVIDG------RLTQMNKAFLGNPVFSSDSS 185

Query: 315 QIVFE-SDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +I F  +D   G  +L +        KR+    E S  + V +     IA  +  G++  
Sbjct: 186 KIAFTEADSGVGAPRLVICDLF---LKRL-FALEGSSPELVVNSDRSRIALVRHQGKEQN 241

Query: 373 IGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +  ++ D  +   + E +   A +   ++ +G +L +   + G      Y + LNGR E 
Sbjct: 242 L--VEVDFLKAAQIGEGARYDAVSNVTYASAGNNLAYYGIRGGKN----YLV-LNGREEA 294

Query: 430 LINTPAYASDPQWVGFM 446
           L   P       W   +
Sbjct: 295 LP--PGNLP---WAPLV 306



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 23/151 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F P  + VAY   + E +  V+           ++G   + I A  FS +GKR   S   
Sbjct: 68  FHPGGKGVAYTRKEGEGVRLVHDG---------KVGAPVASIDALAFSPDGKRIAYSAMV 118

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            +   ++        +E+ T+        S+SPDS  + +         + +   +G   
Sbjct: 119 GKKWRVFVDGAAGVDSEQTTD-------PSFSPDSRHVAYGVKTAAGWSIVI---DG--- 165

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            R++Q  +A   +PV+S     IAFT+    
Sbjct: 166 -RLTQMNKAFLGNPVFSSDSSKIAFTEADSG 195



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 53/314 (16%), Positives = 99/314 (31%), Gaps = 60/314 (19%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
             WR      +    +  T      +SR +       +G        +  DG     LT 
Sbjct: 120 KKWRVFVDGAAGVDSEQTTDPSFSPDSRHVAYGVKTAAG------WSIVIDG----RLTQ 169

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                L  P FS +  K+A+   D      R+ + D       KR+            +S
Sbjct: 170 MNKAFLGNPVFSSDSSKIAFTEADSGVGAPRLVICDL----FLKRLFALEGSSPELVVNS 225

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGK 325
           +  R  +   + +  +   V++      ++      +   + +Y+   + + +   R GK
Sbjct: 226 DRSRIALV--RHQGKEQNLVEVDFLKAAQIGEGARYDAVSNVTYASAGNNLAYYGIRGGK 283

Query: 326 EQL-----------------------------YVMQSNGSDQKRISQDKEASYFDPV--- 353
             L                             +V    G    R +       ++ V   
Sbjct: 284 NYLVLNGREEALPPGNLPWAPLVPSREEKAAAFVDNGTGISLHRTASAGNDLAYEEVGDR 343

Query: 354 -WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             S  G+L A+    G  + + V  K+G+    +V      +P +SP    L++  +KDG
Sbjct: 344 TISRGGELFAYAARRGANWFVVVNGKEGAPFDKVV------SPVFSPDDGFLVYRARKDG 397

Query: 413 DTGSKLYSIDLNGR 426
                L   D NG+
Sbjct: 398 KRF--LVVSDRNGK 409



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 42/107 (39%), Gaps = 9/107 (8%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S  G+    + ++  A     V+ +  A           +S  +SPD   +V+ + ++
Sbjct: 344 TISRGGELFAYAARR-GANWFVVVNGKEGAP------FDKVVSPVFSPDDGFLVYRARKD 396

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           GK  L V   NG   K+         F PV++     +A+    G++
Sbjct: 397 GKRFLVVSDRNGKIVKQ--HQSYEMVFPPVFTADRKSVAYGVKDGQQ 441



 Score = 37.3 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 8/74 (10%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIV 317
           +++P FS +    +   +KD    +   D      ++        +     ++ D   + 
Sbjct: 377 VVSPVFSPDDGFLVYRARKDGKRFLVVSDRNGKIVKQ---HQSYEMVFPPVFTADRKSVA 433

Query: 318 FESDREGKEQLYVM 331
           +   ++G++ ++ +
Sbjct: 434 YGV-KDGQQLVWKV 446


>gi|114047694|ref|YP_738244.1| peptidase S9 prolyl oligopeptidase [Shewanella sp. MR-7]
 gi|113889136|gb|ABI43187.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sp. MR-7]
          Length = 687

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 91/256 (35%), Gaps = 28/256 (10%)

Query: 218 RFSPNQQKVAY----ATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             S +  K+ Y         E    +Y++D T+ D  P +I +         F+++ K  
Sbjct: 46  AVSHDGTKLVYGLKTVNDKGEASSDLYILDLTQADAKPMQITSAAGTEHDVSFANDDKSI 105

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---EGKEQLY 329
                +  +  ++ + L     +++++          S D  QIV  S R   E K+   
Sbjct: 106 YFLASRGGSSQLFQLPLTGGEAQQVSDLPLDIDGYKLSNDGKQIV-LSMRVFPECKDLAC 164

Query: 330 VMQSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QE 383
                 ++++R S  +E           W        F      +    V+        E
Sbjct: 165 SKDKFKAEEERKSTGREYKQLMVRHWDTWEDHARNHLFVGALNGEKLTKVVDITQGLDTE 224

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSR-----KKDGDTGSKLYSIDLNGRNETLIN------ 432
                 S ++  T++P G+ +++S       +   T   L+ + +NG   T +       
Sbjct: 225 TPPKPFSGMEEVTFTPDGKYVVYSAKAPSKDQAWTTNYDLWQVSVNGGKATNLTADNIAW 284

Query: 433 --TPAYASDPQWVGFM 446
              P ++SD +++ ++
Sbjct: 285 DAQPIFSSDGRYMAYL 300



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 99/307 (32%), Gaps = 70/307 (22%)

Query: 175 SRILFVSESVV-SGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
           +++++  ++V   G   + L ++D   A+ + +   S      +  F+ + + + +    
Sbjct: 52  TKLVYGLKTVNDKGEASSDLYILDLTQADAKPMQITSAAGTEHDVSFANDDKSIYFLA-- 109

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------- 277
                             +++ +    I   + S++GK+ ++S++               
Sbjct: 110 SRGGSSQLFQLPLTGGEAQQVSDLPLDIDGYKLSNDGKQIVLSMRVFPECKDLACSKDKF 169

Query: 278 -------------------------KDEAMDIYSVDLQSNATER---LTNTLFINISA-- 307
                                          ++   L      +   +T  L        
Sbjct: 170 KAEEERKSTGREYKQLMVRHWDTWEDHARNHLFVGALNGEKLTKVVDITQGLDTETPPKP 229

Query: 308 -------SYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQKRISQDKEASYFDPV 353
                  +++PD   +V+ +    K+Q +    +       G     ++ D  A    P+
Sbjct: 230 FSGMEEVTFTPDGKYVVYSAKAPSKDQAWTTNYDLWQVSVNGGKATNLTADNIAWDAQPI 289

Query: 354 WSPQGDLIAFTKFSGEKFA---IGVMKKDGSQER-LLVEDSNLQAPT---WSPSGRSLIF 406
           +S  G  +A+   +   F      +M +D S  +   V     ++P+   ++P  R+L  
Sbjct: 290 FSSDGRYMAYLAMTKPGFEADRYRIMLRDTSTGQSKEVAPLWDRSPSSLMFAPDNRTLYV 349

Query: 407 SRKKDGD 413
           + +  G 
Sbjct: 350 TAQDIGQ 356



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 67/184 (36%), Gaps = 8/184 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G +            +      L  +  +G     LT        +P FS + 
Sbjct: 235 EVTFTPDGKYVVYSAKAPSKDQAWTTNYDLWQVSVNGGKATNLTADNIAWDAQPIFSSDG 294

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D  R+ L DT   ++ +    +     +  F+ + +   ++ Q  
Sbjct: 295 RYMAYLAMTKPGFEADRYRIMLRDTSTGQSKEVAPLWDRSPSSLMFAPDNRTLYVTAQDI 354

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
             + I+ V+ Q    + +  +   N   + + D  Q++F+S    +   LY + ++G   
Sbjct: 355 GQVSIFKVNTQFGDVQSV-YSDGSNSLIAIADD--QLIFDSKTLVEPGDLYRINTDGQGL 411

Query: 339 KRIS 342
           KR++
Sbjct: 412 KRLT 415


>gi|333026143|ref|ZP_08454207.1| hypothetical protein STTU_3647 [Streptomyces sp. Tu6071]
 gi|332745995|gb|EGJ76436.1| hypothetical protein STTU_3647 [Streptomyces sp. Tu6071]
          Length = 1954

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/334 (12%), Positives = 98/334 (29%), Gaps = 51/334 (15%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
             +          RLWDV   +++                    D +  +     G     
Sbjct: 1621 TRLASAGSDGTVRLWDVATGRRLHELVGRG-------------DRLISAAFSPVG----- 1662

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               ++ +  +G     + + D DG              +   FS + +++A A  DD   
Sbjct: 1663 -TVLATAGSTGH----VYLWDADGGAFLRELDVETDRTWAEAFSADGEEIATANDDD--- 1714

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-E 295
              V L          ++   +  + +  F+ +G     +   D  + ++    +  A   
Sbjct: 1715 -SVRLWRRATGSHGLQLDGHQGRVRSVAFAKDGATIA-TGCDDGRVRLW--HTRGGALAA 1770

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             L+       + ++ PD S +   S  +G   ++         + + ++     +     
Sbjct: 1771 TLSAHTDRVYAVAFGPDLSWLASAS-WDGTAVIWR----DGAARHVLREHTGKLWTAAAH 1825

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            P    +     +G+   I +           L      + + ++SP G  L        D
Sbjct: 1826 P---TLPLLATAGDDRVIRLWDPATGARVGALTGHSGRVYSLSFSPDGGHLA---SAGDD 1879

Query: 414  TGSKLYSIDLN--GRNETLINTPAYASDPQWVGF 445
               +L+ +  +      TL+          W  F
Sbjct: 1880 GTVRLWRVTGDAVTPKATLVGVQGG-----WAAF 1908



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 88/281 (31%), Gaps = 29/281 (10%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
               G +   +      + +G     + + D       +  P    +++   FSP+ + +A
Sbjct: 1344 HPDGVWPITLNATGTVLATGDGDGVVRLWDTASGEQTHAFPGHTVLVYTTVFSPDGRTLA 1403

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                  +    V L DT        +G  +  +   RFS +G   L +   +   D  +V
Sbjct: 1404 ----TGDRSGTVRLWDTATGALVASLGPHQGPVFRVRFSPDGT--LFATADEGIDDHGTV 1457

Query: 288  DLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
             +   + +RL +          +  + PD   +    D +G  +L+              
Sbjct: 1458 RIWRASDQRLLHEMHGHTGRVYTLDFHPDGDLLA-SGDTDGGVRLW--DPRTGLPGPALD 1514

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---------RLLVEDSNLQA 394
                  +  V++  G  +A    +G   A+ + +     E         +      +  A
Sbjct: 1515 KGAGGVYQVVFADDGRHLAACHSNG---AVRLWQLSAGHEGYEAAPERFQPTPHQGSAWA 1571

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
              + P    L+       D   +++     G+ + ++    
Sbjct: 1572 CRFRPDDTQLV---TAGDDGVVQIWDA-ATGQGKPILRGHG 1608



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 93/331 (28%), Gaps = 40/331 (12%)

Query: 112  VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
             TG V+  G     V  RLWD    +Q                 HT+   +Y ++    G
Sbjct: 1355 ATGTVLATGDGDGVV--RLWDTASGEQTHA-----------FPGHTV--LVYTTVFSPDG 1399

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
                       ++ +G    ++ + D     +          +F  RFSP+    A A  
Sbjct: 1400 ----------RTLATGDRSGTVRLWDTATGALVASLGPHQGPVFRVRFSPDGTLFATADE 1449

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              +D   V +      R    +      +    F  +G     S   D  + ++  D ++
Sbjct: 1450 GIDDHGTVRIWRASDQRLLHEMHGHTGRVYTLDFHPDGDLLA-SGDTDGGVRLW--DPRT 1506

Query: 292  NATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD----QKRIS-QDK 345
                  L           ++ D   +       G  +L+ + +         +R      
Sbjct: 1507 GLPGPALDKGAGGVYQVVFADDGRHLAAC-HSNGAVRLWQLSAGHEGYEAAPERFQPTPH 1565

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            + S +   + P    +  T        I        +  L      + A  +  +G  L 
Sbjct: 1566 QGSAWACRFRPDDTQLV-TAGDDGVVQIWDAATGQGKPILRGHGRRVNAVAFDATGTRLA 1624

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                   D   +L+ +   GR    +     
Sbjct: 1625 ---SAGSDGTVRLWDV-ATGRRLHELVGRGD 1651



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 67/208 (32%), Gaps = 10/208 (4%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             + A  R+         +  RF P+  ++        D   V + D    +    +    
Sbjct: 1553 YEAAPERFQPTPHQGSAWACRFRPDDTQLV----TAGDDGVVQIWDAATGQGKPILRGHG 1608

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              + A  F + G R   S   D  + ++ V         L       ISA++SP  + + 
Sbjct: 1609 RRVNAVAFDATGTRLA-SAGSDGTVRLWDV-ATGRRLHELVGRGDRLISAAFSPVGTVLA 1666

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                      +Y+  ++G    R    +    +   +S  G+ IA T    +   +    
Sbjct: 1667 ---TAGSTGHVYLWDADGGAFLRELDVETDRTWAEAFSADGEEIA-TANDDDSVRLWRRA 1722

Query: 378  KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  +L      +++  ++  G ++ 
Sbjct: 1723 TGSHGLQLDGHQGRVRSVAFAKDGATIA 1750



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 62/191 (32%), Gaps = 11/191 (5%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++ +G     + +    G  +     +    ++   F P+   +A A++D      ++  
Sbjct: 1748 TIATGCDDGRVRLWHTRGGALAATLSAHTDRVYAVAFGPDLSWLASASWD--GTAVIWRD 1805

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                    +  G   +    P         L++   D+ +              LT    
Sbjct: 1806 GAARHVLREHTGKLWTAAAHPTLP------LLATAGDDRVIRLWDPATGARVGALTGHSG 1859

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S S+SPD   +    D +G  +L+ +  +    K      +  +    ++P G   A
Sbjct: 1860 RVYSLSFSPDGGHLASAGD-DGTVRLWRVTGDAVTPKATLVGVQGGWA--AFTPDGGYKA 1916

Query: 363  FTKFSGEKFAI 373
              +  GE + +
Sbjct: 1917 EGEVGGEFWHV 1927


>gi|156374161|ref|XP_001629677.1| predicted protein [Nematostella vectensis]
 gi|156216682|gb|EDO37614.1| predicted protein [Nematostella vectensis]
          Length = 470

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 50/335 (14%), Positives = 110/335 (32%), Gaps = 63/335 (18%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWDV+   ++         A      H      Y   +     F + +        +  
Sbjct: 37  RLWDVEKGTEL---------AQSPLDGHN-----YHVNSCSVSPFGTLMA-------TAS 75

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L + + +      +       +   RFSPN Q +   + D+  I    + D  + +
Sbjct: 76  TDSTLMLWNLETGECLAVLEGHTGAVRVCRFSPNSQFLISGSADETFI----IWDVLLKK 131

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT----LFIN 304
             + +    S + A  F+ +G    I+   +  + I+    +     ++          +
Sbjct: 132 PVRCVDKLESSVTACAFTPDGLHI-ITGTSEGKLAIWEAQ-KGKFITQVEGHDMGVGACD 189

Query: 305 ISASY--------SPDSSQIVFESDREGKEQ------LYVMQSNGSD----QKRISQDKE 346
            S ++            S   F     G +       +Y   +   +     + +    +
Sbjct: 190 FSPTFGSAVPGLSDTSGSAPQFLLASGGNDNLVRLWTIYTASAFSEECHIASRCVLDQHQ 249

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
           +  +D  +SP G ++A    SG+K  I     +G     +      +   ++SP G+ L 
Sbjct: 250 SQVWDCCFSPNGKILA--SASGDKTVILWNPLNGVALHTITGHSRYVTCCSFSPDGKWLA 307

Query: 406 FSRKKDGDTGSKLYSIDLN--------GRNETLIN 432
            +    GD   +L+ + L         G  + L+ 
Sbjct: 308 TAS---GDRTLRLWQLTLTENGKFELRGERKRLVT 339


>gi|116624786|ref|YP_826942.1| WD-40 repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227948|gb|ABJ86657.1| WD-40 repeat protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 295

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 87/240 (36%), Gaps = 20/240 (8%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F+     ++ +      K  + V D     ++         ++   FSP+   +A A Y
Sbjct: 56  AFSRDGKLLAAAGGLPARKGEVLVWDMASQKVKVTISGHSDCIYAVAFSPDGATLATAGY 115

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D      + L D    +  + + +    I A  F+ +GKR + +   D A+ ++  D  S
Sbjct: 116 DK----LIKLWDASSGKELRTLRDHIDAIYALAFTPDGKRIV-TGSADRAVKVW--DAAS 168

Query: 292 NATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD---KE 346
                 T +   +   + + SPD  ++       G ++   + S G  +  +       E
Sbjct: 169 G-ERLFTLSESTDAVNTLALSPDGKRVA----AGGLDKTIRIWSLGEKEGTLLHTLIAHE 223

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLI 405
            +     WS  G  +A +  +     I     D ++ R + +  +      ++P G SL 
Sbjct: 224 DAILRLAWSADGQWLA-SASADRSIKIFRA-ADLTELRAITKLPDWAFGLEFAPDGNSLA 281



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 70/216 (32%), Gaps = 18/216 (8%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           RDGA          + +    FS + + +A A         V + D    +    I    
Sbjct: 40  RDGA----TLKGNAEAVRAVAFSRDGKLLAAAGGLPARKGEVLVWDMASQKVKVTISGHS 95

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             I A  FS +G     +   D+ + ++           L + +    + +++PD  +IV
Sbjct: 96  DCIYAVAFSPDGATLA-TAGYDKLIKLWDAS-SGKELRTLRDHIDAIYALAFTPDGKRIV 153

Query: 318 FES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             S DR     + V  +   ++     +   +      SP G  +A     G    I + 
Sbjct: 154 TGSADRA----VKVWDAASGERLFTLSESTDAVNTLALSPDGKRVA---AGGLDKTIRIW 206

Query: 377 KKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSR 408
                +  LL      +       WS  G+ L  + 
Sbjct: 207 SLGEKEGTLLHTLIAHEDAILRLAWSADGQWLASAS 242


>gi|149917381|ref|ZP_01905879.1| WD-40 repeat [Plesiocystis pacifica SIR-1]
 gi|149821718|gb|EDM81114.1| WD-40 repeat [Plesiocystis pacifica SIR-1]
          Length = 1394

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/246 (17%), Positives = 80/246 (32%), Gaps = 18/246 (7%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             R +  S           L    +DG  +  +            +SP    +A      
Sbjct: 687 YPRGVEFSPVGDRLATNTGLVAQTQDGEPLGRVVSRGAGSARHLLWSPANDWLAVVDEAT 746

Query: 234 E-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
              +  V       +R   R+ +    + A   S +G R  + V  D+ + ++       
Sbjct: 747 RLQLWTVGEQGPDRNRELGRVSHHDPNLSA---SPDGSRLAVIV--DDRVQLWDPRDPGR 801

Query: 293 ATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
             E  L     + ++A +SPD   +      +G   L++   N        + +      
Sbjct: 802 KPEFELIGHQALIMAARFSPDGQILATT---DGVGTLWLWDPNTGRALAEFESRAGFLEA 858

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPT---WSPSGRSLIFS 407
             W P+G LIA     GE   I +    G+  E +     +    +   ++P G +L+ S
Sbjct: 859 LAWDPEGQLIA---AGGEDSVIRLWHASGADTEPVATLAGHRGVISQLEFTPDGETLV-S 914

Query: 408 RKKDGD 413
              DG 
Sbjct: 915 TATDGR 920



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 90/263 (34%), Gaps = 31/263 (11%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +L + D +         SR   L    + P  Q +A     ++ ++R++           
Sbjct: 834  TLWLWDPNTGRALAEFESRAGFLEALAWDPEGQLIA--AGGEDSVIRLWHASGADTEPVA 891

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---AS 308
             +   R +I    F+ +G+  + S   D  +  + +         L     I+     A 
Sbjct: 892  TLAGHRGVISQLEFTPDGETLV-STATDGRVRQWGMQPG------LPRAQLIDAEVEVAV 944

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA---SYFDPVWSPQGDLIAFTK 365
            + PD  ++V        + L V    G + +R  +D         +   SP G  IA   
Sbjct: 945  FLPDGQRMV----TGEADALRVWTVEGGEFERELEDSAGVVYGVLNAAQSPAGPRIA--- 997

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             + E   IG+   D       +E    +  +  +S  G +L       GD   +++ ++ 
Sbjct: 998  -ALEGRMIGLWDADTGARLHTLEGRCDELFSAAFSEDGSALA---AGCGDGNVEVWDVE- 1052

Query: 424  NGRNETLINTPAYASDPQWVGFM 446
                E  +  P    +P  + F+
Sbjct: 1053 --SGEPSVPKPPLDPEPSLLTFL 1073



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 69/216 (31%), Gaps = 24/216 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---- 273
           RFSPN   +A  +    ++          +  P              FS  G R      
Sbjct: 646 RFSPNGALIATVSRGVVELWSAETGAFLTEVDPDDAAANEKYPRGVEFSPVGDRLATNTG 705

Query: 274 -ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            ++  +D       V   + +   L           +SP +  +    D   + QL+ + 
Sbjct: 706 LVAQTQDGEPLGRVVSRGAGSARHL----------LWSPANDWLA-VVDEATRLQLWTVG 754

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDS 390
             G D+ R          +   SP G  +A      ++  +   +  G +    L+   +
Sbjct: 755 EQGPDRNRELGRVSHHDPNLSASPDGSRLAVI--VDDRVQLWDPRDPGRKPEFELIGHQA 812

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            + A  +SP G+ L      DG     L+  +  GR
Sbjct: 813 LIMAARFSPDGQILA---TTDGVGTLWLWDPN-TGR 844



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 55/216 (25%), Gaps = 59/216 (27%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI--- 303
            R  + I   R        S +G     +        +Y++D    +  +L+        
Sbjct: 571 SRTLREIQGRRGEAPLIALSPDGALLATASYTGGFPTVYAMD-SGESLYQLSRLEGYGTE 629

Query: 304 -----NISAS-------YSPDSSQIVFES------------------------------- 320
                N S S       +SP+ + I   S                               
Sbjct: 630 LAGTGNASPSGGFTDLRFSPNGALIATVSRGVVELWSAETGAFLTEVDPDDAAANEKYPR 689

Query: 321 --------DR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                   DR      L     +G    R+      S    +WSP  D +A       + 
Sbjct: 690 GVEFSPVGDRLATNTGLVAQTQDGEPLGRVVSRGAGSARHLLWSPANDWLAVVD-EATRL 748

Query: 372 AIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLI 405
            +  + + G      +   +   P  + SP G  L 
Sbjct: 749 QLWTVGEQGPDRNRELGRVSHHDPNLSASPDGSRLA 784



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/232 (11%), Positives = 76/232 (32%), Gaps = 37/232 (15%)

Query: 177  ILFVSESVVSGIIKNSLC--VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            + F+  +       + L   +   DG++ R +       L    +  + + +       +
Sbjct: 1070 LTFLQRADEDDARPDELWSLLFTTDGSSPRIVGGGNSGALHL--WEGDGRALMALGGHSK 1127

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              +   + D    +                FS++G   + S+   + +     D+++  +
Sbjct: 1128 ASVVSIVKDPHRPQ-------------MAAFSTDGHVHIWSLGMGQPIR----DIETGLS 1170

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
              +           Y+ +  ++V  S+ +    + +  +N  ++                
Sbjct: 1171 RPI--------ELCYADEGRRLVAASESD----VVLWDANTGERLAGISKHRRQITALAC 1218

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLI 405
            +P G L+A     G    I +     S+   + +    ++   +SP+G  ++
Sbjct: 1219 APDGKLVATASRDG---VIELWDPVLSRSFAIFDGLEPVEYLRYSPTGEHIL 1267


>gi|119474353|ref|XP_001259052.1| WD domain protein [Neosartorya fischeri NRRL 181]
 gi|119407205|gb|EAW17155.1| WD domain protein [Neosartorya fischeri NRRL 181]
          Length = 1167

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 75/229 (32%), Gaps = 24/229 (10%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMD-----TRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            F+P   K+A      E  L  ++              + +    + + +  FS++G+   
Sbjct: 913  FAP---KLAIIRRRFEGELPNWIQQCPRVEESWSPDRQTLEGHSNSVESVAFSADGQLLA 969

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQ 332
             S   D  + ++  D  +   +        ++ + ++S D   +   S       + +  
Sbjct: 970  -SGSWDNTIKLW--DPSTGGLKHTLEGHSNSVESVAFSADGQLLASGS---WDNTIKLWD 1023

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             +    K   +          ++  G L+A   +      I +        +  +E  + 
Sbjct: 1024 PSTGGLKHTLEGHSNLVHSVAFAADGQLLASGSWDNT---IKLWDPSTGALKHTLEGHSD 1080

Query: 393  --QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
               +  +S  GR L       GD   KL+     G  +  I+T  Y +D
Sbjct: 1081 SVWSVAFSADGRLLA---SGSGDATLKLWDPS-TGALKHTISTDGYVND 1125



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 72/232 (31%), Gaps = 22/232 (9%)

Query: 204  RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            R         +    FS + Q +A  ++D+     + L D         +    + + + 
Sbjct: 946  RQTLEGHSNSVESVAFSADGQLLASGSWDN----TIKLWDPSTGGLKHTLEGHSNSVESV 1001

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDR 322
             FS++G+    S   D  + ++  D  +   +  L     +  S +++ D   +   S  
Sbjct: 1002 AFSADGQLLA-SGSWDNTIKLW--DPSTGGLKHTLEGHSNLVHSVAFAADGQLLASGS-- 1056

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                 + +   +    K   +    S +   +S  G L+A          + +       
Sbjct: 1057 -WDNTIKLWDPSTGALKHTLEGHSDSVWSVAFSADGRLLA---SGSGDATLKLWDPSTGA 1112

Query: 383  ER-LLVEDSNLQAPTWS-PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +  +  D  +    +S P      +     G    + +     G  +T+  
Sbjct: 1113 LKHTISTDGYVNDIEFSFP------YLVTNRGSFNIQAWVKGSYGSLQTISP 1158



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 63/171 (36%), Gaps = 12/171 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG   N++ + D     +++        +    FS + Q +A  ++D+     + L D  
Sbjct: 970  SGSWDNTIKLWDPSTGGLKHTLEGHSNSVESVAFSADGQLLASGSWDN----TIKLWDPS 1025

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                   +    +++ +  F+++G+    S   D  + ++  D  + A +  L       
Sbjct: 1026 TGGLKHTLEGHSNLVHSVAFAADGQLLA-SGSWDNTIKLW--DPSTGALKHTLEGHSDSV 1082

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVW 354
             S ++S D   +   S   G   L +   +    K  IS D   +  +  +
Sbjct: 1083 WSVAFSADGRLLASGS---GDATLKLWDPSTGALKHTISTDGYVNDIEFSF 1130


>gi|331695749|ref|YP_004331988.1| putative acylaminoacyl-peptidase [Pseudonocardia dioxanivorans
           CB1190]
 gi|326950438|gb|AEA24135.1| putative acylaminoacyl-peptidase [Pseudonocardia dioxanivorans
           CB1190]
          Length = 643

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 16/146 (10%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD------------KEASYFDPV 353
           S    PD   + + SDR+G+ +LYV +        +                 A      
Sbjct: 36  SPRPGPDGRLLAWISDRDGRPRLYVGELGSGPAPVVEPRAALPTEPDDRDLPHADVTGVA 95

Query: 354 WSPQGDLIA--FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKK 410
           WSP G  +A       GE+  + ++  DG + R +   +      +WSP+G  L  +   
Sbjct: 96  WSPDGSWLACQLAPGGGERTRVLLVSPDGRRRREIAPAATAVVLGSWSPNGSHLGVTIYG 155

Query: 411 DGDTGSKLYSIDL-NGRNETLINTPA 435
            G    +   +DL +G +  L + PA
Sbjct: 156 SGQGEGQACLVDLRDGTSTVLASGPA 181



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 73/236 (30%), Gaps = 28/236 (11%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSL--CVMDRDGANIRYL--TPSRDQILFEP 217
           + + +  + G     +   S           L   + DRDG    Y+    S    + EP
Sbjct: 14  VGERLVADAGPVADVVSAASFRSPRPGPDGRLLAWISDRDGRPRLYVGELGSGPAPVVEP 73

Query: 218 R---------------------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           R                     +SP+   +A             L+ +   R  + I   
Sbjct: 74  RAALPTEPDDRDLPHADVTGVAWSPDGSWLACQLAPGGGERTRVLLVSPDGRRRREIAPA 133

Query: 257 RSMILAPRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            + ++   +S NG    +++            VDL+   +  L +     +  + S D  
Sbjct: 134 ATAVVLGSWSPNGSHLGVTIYGSGQGEGQACLVDLRDGTSTVLASGPAAMV-CAVSGDGH 192

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           ++V    R G   L ++      +  +     A+  D  +   G L+     +G +
Sbjct: 193 RVVVRHGRRGDRHLELIDLRTGRRTDLIPGGGATVADARFGVSGGLLYLHTDAGRE 248



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 34/113 (30%), Gaps = 15/113 (13%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-------QERLLVEDSNLQAP---- 395
           AS+  P   P G L+A+      +  + V +           +  L  E  +   P    
Sbjct: 32  ASFRSPRPGPDGRLLAWISDRDGRPRLYVGELGSGPAPVVEPRAALPTEPDDRDLPHADV 91

Query: 396 ---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQWVG 444
               WSP G  L       G   +++  +  +GR    +           W  
Sbjct: 92  TGVAWSPDGSWLACQLAPGGGERTRVLLVSPDGRRRREIAPAATAVVLGSWSP 144


>gi|37523440|ref|NP_926817.1| peptidase [Gloeobacter violaceus PCC 7421]
 gi|35214444|dbj|BAC91812.1| gll3871 [Gloeobacter violaceus PCC 7421]
          Length = 749

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 90/279 (32%), Gaps = 71/279 (25%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ ++V  +            +  R +   + +      +L P+FS +G +    +  D
Sbjct: 135 SPDGKRVLVSLSGR------LFVYARPEGRVQELATSPGTVLDPKFSPDGTQVSYVLNAD 188

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA-----------------SYSPDSSQIVFE--- 319
               IY++DL +    ++T+     +S                   +SPDS  + +E   
Sbjct: 189 ----IYAIDLAAGKERQITSGGNGQVSNGLAEFVAQEEMGRFSGYWWSPDSRWVAYEQAD 244

Query: 320 -----------------------SDREGKE----QLYVMQSNGSDQKRISQDKEASYFDP 352
                                    R GK     +L V+ ++G     +  D+E   +  
Sbjct: 245 ARPVEIWRPADPARPEASPHAQHYPRPGKANVEVRLGVVGADGGRTTWVDWDRERYPYLA 304

Query: 353 VWSPQG----DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------NLQAPTWSPSGR 402
                      L+   +   ++  +      G    LL E        + Q P W   G 
Sbjct: 305 TVKWDKGGPLTLVVQDRLQQQEAVLTADTDTGRTAVLLTESDPAWLNLDQQTPRWLGDGS 364

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP--AYASD 439
             +++ ++ G    +L   D  G+   L+  P   Y  +
Sbjct: 365 GFLWTSERQGAPQLELR--DRQGQFVRLLVAPTIGYVPE 401



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 74/238 (31%), Gaps = 42/238 (17%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN---GKRALISVQK 278
           +  +  +  +D E    +  +          +   R        +++   G+ A++  + 
Sbjct: 286 DGGRTTWVDWDRERYPYLATVKWDKGGPLTLVVQDRLQQQEAVLTADTDTGRTAVLLTES 345

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D A     ++L                +  +  D S  ++ S+R+G  QL +    G   
Sbjct: 346 DPAW----LNLD-------------QQTPRWLGDGSGFLWTSERQGAPQLELRDRQGQFV 388

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----------AIGVMKKDGSQERLLVE 388
           + +              P+   +A  +   E +           +  +  DG +   L +
Sbjct: 389 RLLVAPTIGYV------PEKSDLAVDETRREVYFQAGATPTAVGLWRVSLDGGEPVALTD 442

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                   ++ +  SL+     D          + +GR   L   P+ A +P    F+
Sbjct: 443 RPGQHLAVYARN-FSLVARSFTDSGAMPAWEVAERDGR--RLGTLPSVALEP---PFV 494


>gi|117920744|ref|YP_869936.1| peptidase S9 prolyl oligopeptidase [Shewanella sp. ANA-3]
 gi|117613076|gb|ABK48530.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sp. ANA-3]
          Length = 687

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 91/256 (35%), Gaps = 28/256 (10%)

Query: 218 RFSPNQQKVAY----ATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             S +  K+ Y         E    +Y++D T+ D  P +I +         F+++ K  
Sbjct: 46  AVSHDGTKLVYGLKTVNDKGEASSDLYILDLTQADAKPMQITSAAGTEHDVSFANDDKSI 105

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---EGKEQLY 329
                +  +  ++ + L     +++++          S D  QIV  S R   E K+   
Sbjct: 106 YFLASRSGSSQLFQLPLTGGEAQQVSDLPLDIDGYKLSNDGKQIV-LSMRVFPECKDLAC 164

Query: 330 VMQSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QE 383
                 ++++R S  +E           W        F      +    V+        E
Sbjct: 165 SKDKFKAEEERKSTGREYKQLMVRHWDTWEDHARNHLFVGALNGEKLTKVVDITQGLDTE 224

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSR-----KKDGDTGSKLYSIDLNGRNETLIN------ 432
                 S ++  T++P G+ +++S       +   T   L+ + +NG   T +       
Sbjct: 225 TPPKPFSGMEEVTFTPDGKFVVYSAKAPSKDQAWTTNYDLWQVSVNGGKATNLTADNIAW 284

Query: 433 --TPAYASDPQWVGFM 446
              P ++SD +++ ++
Sbjct: 285 DAQPRFSSDGRYMAYL 300



 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 98/307 (31%), Gaps = 70/307 (22%)

Query: 175 SRILFVSESVV-SGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
           +++++  ++V   G   + L ++D   A+ + +   S      +  F+ + + + +    
Sbjct: 52  TKLVYGLKTVNDKGEASSDLYILDLTQADAKPMQITSAAGTEHDVSFANDDKSIYFLASR 111

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------- 277
                             +++ +    I   + S++GK+ ++S++               
Sbjct: 112 SGS--SQLFQLPLTGGEAQQVSDLPLDIDGYKLSNDGKQIVLSMRVFPECKDLACSKDKF 169

Query: 278 -------------------------KDEAMDIYSVDLQSNATER---LTNTLFINISA-- 307
                                          ++   L      +   +T  L        
Sbjct: 170 KAEEERKSTGREYKQLMVRHWDTWEDHARNHLFVGALNGEKLTKVVDITQGLDTETPPKP 229

Query: 308 -------SYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQKRISQDKEASYFDPV 353
                  +++PD   +V+ +    K+Q +    +       G     ++ D  A    P 
Sbjct: 230 FSGMEEVTFTPDGKFVVYSAKAPSKDQAWTTNYDLWQVSVNGGKATNLTADNIAWDAQPR 289

Query: 354 WSPQGDLIAFTKFSGEKFA---IGVMKKDGSQER-LLVEDSNLQAPT---WSPSGRSLIF 406
           +S  G  +A+   +   F      +M +D S  +   V     ++P+   ++P  R+L  
Sbjct: 290 FSSDGRYMAYLAMTKPGFEADRYRIMLRDTSTGQSKEVAPLWDRSPSSLMFAPDNRTLYV 349

Query: 407 SRKKDGD 413
           + +  G 
Sbjct: 350 TAQDIGQ 356



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 68/184 (36%), Gaps = 8/184 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G F            +      L  +  +G     LT        +PRFS + 
Sbjct: 235 EVTFTPDGKFVVYSAKAPSKDQAWTTNYDLWQVSVNGGKATNLTADNIAWDAQPRFSSDG 294

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D  R+ L DT   ++ +    +     +  F+ + +   ++ Q  
Sbjct: 295 RYMAYLAMTKPGFEADRYRIMLRDTSTGQSKEVAPLWDRSPSSLMFAPDNRTLYVTAQDI 354

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
             + I+ V+ Q    + +  +   N   + + D  Q++F+S    +   LY + ++G   
Sbjct: 355 GQVSIFKVNTQFGDVQSV-YSDGSNSLIAIADD--QLIFDSKTLVEPGDLYRINTDGQGL 411

Query: 339 KRIS 342
           KR++
Sbjct: 412 KRLT 415


>gi|319900986|ref|YP_004160714.1| alanyl dipeptidyl peptidase [Bacteroides helcogenes P 36-108]
 gi|319416017|gb|ADV43128.1| putative alanyl dipeptidyl peptidase [Bacteroides helcogenes P
           36-108]
          Length = 845

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 73/408 (17%), Positives = 137/408 (33%), Gaps = 83/408 (20%)

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+R   F+L +  +F  ++++    P  +         L+T         R R    L 
Sbjct: 192 DLKR--RFSLYNT-AFGCRVSSVSLSPNGK--------YLLTRYWDNYSTKRSRTHAELT 240

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           +VK  + I+     ++  + R +    S+ +Y ++T                   G  +N
Sbjct: 241 EVKTGRVIL----PNANENMRWMP--CSNKLYYTVT-------------------GRQQN 275

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD-----DEDILRVYLMDTRI 246
            L + D        L  +  +  F   +SP +  + Y   D     +  + R+   D RI
Sbjct: 276 DLVIYDPVTMREEVLFKNVPEGYFH--WSPTEDYLIYTPTDEGEKVNGPLKRILHPDDRI 333

Query: 247 ---------------DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-------I 284
                              +R+      +     S +GK+ L S  K            +
Sbjct: 334 PGSRNRYYLVKYDMATGLSERLTYGSHNVYLNDISPDGKKLLCSTSKPNITKCPFSLSSL 393

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKE------------Q 327
           + +DL +  T+ L +       ASYSPD  Q++           GK             Q
Sbjct: 394 FEIDLATMKTDTLVSWDAYTGGASYSPDGKQLLLTGSPSAFGGIGKNCGNHPIANDFDTQ 453

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLL 386
            ++M  +      I++D   +     W+     I FT   G+   I      DG  E L 
Sbjct: 454 AFIMDLSTKKVTPITRDFNPTVNPLQWNRTDGCIYFTTVDGDCQHIYRYTPKDGQFEMLP 513

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           +++  + + T +    ++         +    Y+ D   +  TL+  P
Sbjct: 514 LKEDVITSFTLAKDNPAIAAYVGGGNTSVGAAYTYDTKKKASTLLANP 561


>gi|83858949|ref|ZP_00952471.1| dipeptidyl peptidase IV [Oceanicaulis alexandrii HTCC2633]
 gi|83853772|gb|EAP91624.1| dipeptidyl peptidase IV [Oceanicaulis alexandrii HTCC2633]
          Length = 748

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 68/199 (34%), Gaps = 53/199 (26%)

Query: 218 RFSPNQQKVAY--ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP------------ 263
           RFSP+ ++V +     DD  +  ++ MD    R    +    S +LAP            
Sbjct: 54  RFSPDGERVTFLRPKDDDRTVTDLWAMDLSDGRTYMLV---DSAVLAPDERELSEAEIQY 110

Query: 264 ----RFSSNGKRALISVQKDEAMDIYSVDLQS---------NATERLTNTLFINISASYS 310
               R S++G   ++S   DE  +   V L              ERL  T      A  S
Sbjct: 111 RERARISTSG---VVSYDWDETGEAILVPLDGDVFYVDVNTGEAERLMQTEAFETDARVS 167

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----------------ASYFDPVW 354
           PD S + F  D    + L+V      +++ ++ +                  + Y    W
Sbjct: 168 PDGSYVSFIRD----QNLWVHDLETGEERALTTEGGDAISWGVAEFVAQEEMSRYTGYWW 223

Query: 355 SPQGDLIAFTKFSGEKFAI 373
           SP G  IA  +       I
Sbjct: 224 SPDGRYIAAARIDETPVEI 242



 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 66/192 (34%), Gaps = 58/192 (30%)

Query: 264 RFSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQ----- 315
           RFS +G+R      KD+     D++++DL    T  L +      SA  +PD  +     
Sbjct: 54  RFSPDGERVTFLRPKDDDRTVTDLWAMDLSDGRTYMLVD------SAVLAPDERELSEAE 107

Query: 316 --------------IVFESDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                         + ++ D  G          ++ +  N  + +R+ Q  EA   D   
Sbjct: 108 IQYRERARISTSGVVSYDWDETGEAILVPLDGDVFYVDVNTGEAERLMQ-TEAFETDARV 166

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL------------------QAPT 396
           SP G  ++F +       + V   +  +ER L  +                         
Sbjct: 167 SPDGSYVSFIRDQ----NLWVHDLETGEERALTTEGGDAISWGVAEFVAQEEMSRYTGYW 222

Query: 397 WSPSGRSLIFSR 408
           WSP GR +  +R
Sbjct: 223 WSPDGRYIAAAR 234



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 51/339 (15%), Positives = 106/339 (31%), Gaps = 59/339 (17%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP------ 217
           + +   +       +    S VS I   +L V D +    R LT      +         
Sbjct: 152 ERLMQTEAFETDARVSPDGSYVSFIRDQNLWVHDLETGEERALTTEGGDAISWGVAEFVA 211

Query: 218 ----------RFSPNQQKVAYATYDDEDILRV---------------------------- 239
                      +SP+ + +A A  D+  +  V                            
Sbjct: 212 QEEMSRYTGYWWSPDGRYIAAARIDETPVEIVPRFGINAEGVTVTDQRYPRAGTPNVLIE 271

Query: 240 -YLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALISVQKDEAM--DIYSVDLQSNA- 293
            +++D       +      + I   R  +S +        Q       DI + + ++ A 
Sbjct: 272 LHVIDVATGERTQVDLGEETDIYLARVNWSQDSGTLYAQRQNRAQTVLDILAANPETGAT 331

Query: 294 TERLT--NTLFINISASYSP--DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
              LT  N  +IN++  +    D    ++ S+R G   +Y + ++G+  + ++  +    
Sbjct: 332 ETVLTEQNDAWINLTNDFRALEDGG-FLWTSERTGFRHIYHVSADGA-VRPLTSGEWVVD 389

Query: 350 FDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                S  G  + F  +  S  +  +  +  +G +   + E     + +    G   I  
Sbjct: 390 DIAGLSEDGATVYFEGWVTSPLERHLYAVPFEGGEPVQITEGEGRWSVSLGQGGTGFI-G 448

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
              D DT  +    D++G     I       D  +  F+
Sbjct: 449 SYSDPDTPPQTALYDISGERVAWIEENTINEDHPYAPFL 487


>gi|78049683|ref|YP_365858.1| TolB-like protein [Xanthomonas campestris pv. vesicatoria str.
           85-10]
 gi|78038113|emb|CAJ25858.1| TolB-like protein [Xanthomonas campestris pv. vesicatoria str.
           85-10]
          Length = 293

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 69/214 (32%), Gaps = 25/214 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATE----RLTNTLFINI 305
           + +  +       S +G+R + +  +       D++   L+    +       NT     
Sbjct: 33  VVSTPANEARATLSPDGQRIVWASDRAGGTGGWDLWQAQLRGGRWQDAQPLPINTAQDET 92

Query: 306 SASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSP 356
           +  +S D   ++F S R    G   LY             Q      +   +   P  S 
Sbjct: 93  TPLFSADGRWLLFASTRPGGAGGSDLYRAPVGAQGAVGPVQSLGAAINSAGNERAPTLSL 152

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT------WSPSGRSLIFS 407
            G  + F            + V + DG      V   ++ +        W   GR+L+++
Sbjct: 153 DGTRLLFASDGHGGAGGMDLFVARWDGQAFTTPVAPVDINSAADELDAAWLGDGRALVWA 212

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R K       L +I  +GR    +  P   + PQ
Sbjct: 213 RGKTNGPSQLLLAICKDGRFAQGLPLPLSFNGPQ 246



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 24/170 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGS---DQKRISQDKEASYFDP 352
           +T      A+ SPD  +IV+ SDR    G   L+  Q  G    D + +  +       P
Sbjct: 35  STPANEARATLSPDGQRIVWASDRAGGTGGWDLWQAQLRGGRWQDAQPLPINTAQDETTP 94

Query: 353 VWSPQGDLIAFTKFSGE--------KFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSG 401
           ++S  G  + F              +  +G     G  + L   +    N +APT S  G
Sbjct: 95  LFSADGRWLLFASTRPGGAGGSDLYRAPVGAQGAVGPVQSLGAAINSAGNERAPTLSLDG 154

Query: 402 RSLIFSRK-KDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
             L+F+     G  G  L+    +G+  T       IN+ A   D  W+G
Sbjct: 155 TRLLFASDGHGGAGGMDLFVARWDGQAFTTPVAPVDINSAADELDAAWLG 204



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 74/200 (37%), Gaps = 24/200 (12%)

Query: 220 SPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ Q++ +A+         D+ +  L   R   A     N       P FS++G+  L 
Sbjct: 46  SPDGQRIVWASDRAGGTGGWDLWQAQLRGGRWQDAQPLPINTAQDETTPLFSADGRWLLF 105

Query: 275 SVQKDEAM---DIYSVDLQS----NATERL---TNTLFINISASYSPDSSQIVFESD--- 321
           +  +       D+Y   + +       + L    N+     + + S D ++++F SD   
Sbjct: 106 ASTRPGGAGGSDLYRAPVGAQGAVGPVQSLGAAINSAGNERAPTLSLDGTRLLFASDGHG 165

Query: 322 REGKEQLYVMQSNG----SDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGV 375
             G   L+V + +G    +    +  +  A   D  W   G  + + +   +G    +  
Sbjct: 166 GAGGMDLFVARWDGQAFTTPVAPVDINSAADELDAAWLGDGRALVWARGKTNGPSQLLLA 225

Query: 376 MKKDGSQERLLVEDSNLQAP 395
           + KDG   + L    +   P
Sbjct: 226 ICKDGRFAQGLPLPLSFNGP 245



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 49/165 (29%), Gaps = 19/165 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--- 234
           +     G     L      G    + + L  +  Q    P FS + + + +A+       
Sbjct: 55  ASDRAGGTGGWDLWQAQLRGGRWQDAQPLPINTAQDETTPLFSADGRWLLFASTRPGGAG 114

Query: 235 --DILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEAM---DIYS 286
             D+ R  +         + +G   N      AP  S +G R L +          D++ 
Sbjct: 115 GSDLYRAPVGAQGAVGPVQSLGAAINSAGNERAPTLSLDGTRLLFASDGHGGAGGMDLFV 174

Query: 287 VDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREGKE 326
                 A          N+    + A++  D   +V+   +    
Sbjct: 175 ARWDGQAFTTPVAPVDINSAADELDAAWLGDGRALVWARGKTNGP 219


>gi|118394412|ref|XP_001029578.1| hypothetical protein TTHERM_01422380 [Tetrahymena thermophila]
 gi|89283821|gb|EAR81915.1| hypothetical protein TTHERM_01422380 [Tetrahymena thermophila SB210]
          Length = 2400

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 52/318 (16%), Positives = 111/318 (34%), Gaps = 47/318 (14%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      +            +WDV    Q++               H+I+    + I  
Sbjct: 1855 SVTFSADSKYLATASFNSLCIIWDVDKGFQLL---------------HSINAHDQKKIFS 1899

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                F+ +++       +G    +  V +  DG  +          + +  FSPN + +A
Sbjct: 1900 VAFSFDGKLI------ATGSEDQTCKVWNIEDGFKLIQTLKGHTYWISQVAFSPNGKYLA 1953

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             ++ D  D  +++ ++   +       +  S + +  FS+N K    S   D    I+ V
Sbjct: 1954 TSSQD--DTFKIWNVEKGYELIDTIKAHIYS-VFSVVFSANSKYLA-SSSADATCKIWDV 2009

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKE 346
            + +      +        SA++S D+ Q+V  S   G     +     G +  ++ +   
Sbjct: 2010 E-KGFQLVNIIQHTKQIYSAAFSQDAKQLVTGS---GDTTCKIWNLEKGFELIKMDEKHS 2065

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQAPTWSPSGRS 403
                   +SP G L+A T      + I     +   E   ++     ++    ++P G  
Sbjct: 2066 YVISSVAFSPDGKLLATT--DERFYKIW--STERGFELINKIEAHTLSINCLAFTPDGNY 2121

Query: 404  LIFSRKKDGDTGSKLYSI 421
            L+ +     D   K++S+
Sbjct: 2122 LLTNST---DKTCKVWSV 2136



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 42/322 (13%), Positives = 97/322 (30%), Gaps = 73/322 (22%)

Query: 109  QVLVTGRVIKEGKDRLRVE-----FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
               V   V      +L        +++W  +   ++I K            AHT+S  I 
Sbjct: 2064 HSYVISSVAFSPDGKLLATTDERFYKIWSTERGFELINK----------IEAHTLS--IN 2111

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                   G++            S      +  + + G    +      Q++     SP+ 
Sbjct: 2112 CLAFTPDGNYLL--------TNSTDKTCKVWSVHK-GFKFLHNIQGNTQLIITIAISPDN 2162

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISV---- 276
              +A ++ D     +++     I +  + I  F      + +  FS +G+    S     
Sbjct: 2163 MFLAASSTD--QTFKIW----NIQKEFQLITTFEGFEHFVSSLYFSPDGRYLAASYGNTC 2216

Query: 277  ----QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------REGKE 326
                  ++   I+++   S   ++LT          +S D   +   S          KE
Sbjct: 2217 KIYDVNEKFELIHTIQAHSQYVKQLT----------FSNDGKYLATCSSDTTCKIWSVKE 2266

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            Q  ++ +     + ++          ++S     +A   +  +   I     +     + 
Sbjct: 2267 QFNLLNTIQGHTQVVTH--------IIFSADSKYLATASYD-KTCKIW--NTENGFSLIC 2315

Query: 387  VEDS---NLQAPTWSPSGRSLI 405
                   N+ +  +S   + L 
Sbjct: 2316 TFQGHAQNISSMAFSYDNKYLA 2337


>gi|108760361|ref|YP_630468.1| hypothetical protein MXAN_2247 [Myxococcus xanthus DK 1622]
 gi|11875643|gb|AAG40737.1|AF299085_1 Bap1 [Myxococcus xanthus]
 gi|108464241|gb|ABF89426.1| Bap1 [Myxococcus xanthus DK 1622]
          Length = 721

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 63/191 (32%), Gaps = 11/191 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A   YD      V + D         +    + + A  FS +G+    +  
Sbjct: 125 AFSPDGRLLASGGYDA----VVRVWDVAAGAQVAELKGHEAELHAVAFSPDGRWLA-AAG 179

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +  A+ ++    Q      L+    +    ++SPD   +       G ++   +      
Sbjct: 180 RPGALWLWD-WKQGRRVALLSGHTDVVRGLAFSPDGEWLA----SGGLDRTVRVWRIRDG 234

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            + +    +       +SP G  +  +        +  +       RL      +++  +
Sbjct: 235 AEVLRFTHDDIVIAVAFSPDGGRLVSSSMD-RTARVWELTARRELHRLTGHGDKVESCAF 293

Query: 398 SPSGRSLIFSR 408
           S  G  ++ + 
Sbjct: 294 SADGERVMTAS 304



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 85/287 (29%), Gaps = 36/287 (12%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    R+WDV    Q+   +     A    +A               G +      
Sbjct: 134 ASGGYDAVVRVWDVAAGAQVA--ELKGHEAELHAVA-----------FSPDGRWL----- 175

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                 +     +L + D        L      ++    FSP+ + +A    D      V
Sbjct: 176 -----AAAGRPGALWLWDWKQGRRVALLSGHTDVVRGLAFSPDGEWLASGGLDR----TV 226

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            +   R      R      +++A  FS +G R + S   D    ++ +  +     RLT 
Sbjct: 227 RVWRIRDGAEVLRFT-HDDIVIAVAFSPDGGRLV-SSSMDRTARVWELTAR-RELHRLTG 283

Query: 300 TLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                 S ++S D  +++  S DR     +    +       + ++   +          
Sbjct: 284 HGDKVESCAFSADGERVMTASADRA----IRFWDARTGALLDVQRNT-GALSAVAIDAGF 338

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +    + G    + V       ERL    + + A   SP GR+  
Sbjct: 339 QQLVQAGWEGRVQRVDVRGGGEVLERLDAHRTFVMAVALSPDGRTFA 385



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 63/177 (35%), Gaps = 10/177 (5%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F   +LA  FS +G+    S   D  + ++ V         L        + ++SPD   
Sbjct: 117 FEGSVLALAFSPDGRLLA-SGGYDAVVRVWDV-AAGAQVAELKGHEAELHAVAFSPDGRW 174

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +   + R G   L++       +  +            +SP G+ +A +        +  
Sbjct: 175 LA-AAGRPGA--LWLWDWKQGRRVALLSGHTDVVRGLAFSPDGEWLA-SGGLDRTVRVWR 230

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           ++ DG++      D  + A  +SP G  L+ S     D  ++++ +        L  
Sbjct: 231 IR-DGAEVLRFTHDDIVIAVAFSPDGGRLVSSSM---DRTARVWELTARRELHRLTG 283



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 66/203 (32%), Gaps = 17/203 (8%)

Query: 238 RVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--LQSNAT 294
           RV  +D R      +R+   R+ ++A   S +G+    S   D  + ++S          
Sbjct: 349 RVQRVDVRGGGEVLERLDAHRTFVMAVALSPDGRTFA-SGGMDGVLKVWSRPEVPPDVLL 407

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             L       +  S  PD     F S  E   + + + + G    R+  +   +      
Sbjct: 408 RELPAWP--EVLTSVGPD----AFVSGGEDGLRSWSVSAGGELHSRL--EAPDAVGAVAV 459

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           S    L+A     GE   +  ++       +     +++A  +SP G  L          
Sbjct: 460 SADRRLLAVGTLKGEV-RVRDVRSGNQLMVIPAARESIRALAFSPDGALLA----AGVAQ 514

Query: 415 GSKLYSIDLNGRNETLINTPAYA 437
              L+++    +   L      A
Sbjct: 515 DVVLWAVPSATQVARLTGHTGKA 537



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 74/261 (28%), Gaps = 13/261 (4%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
                  R  + +   +++  +          +      +  G +K  + V D    N  
Sbjct: 427 SGGEDGLRSWSVSAGGELHSRLEAPDAVGAVAVSADRRLLAVGTLKGEVRVRDVRSGNQL 486

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            + P+  + +    FSP+   +A           V L          R+        A  
Sbjct: 487 MVIPAARESIRALAFSPDGALLA-----AGVAQDVVLWAVPSATQVARLTGHTGKAWALA 541

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F + G+R   S   D  + I+  D+      R+        + ++      +        
Sbjct: 542 FDATGQRLA-SGAADHTVRIW--DVARGTVIRVLEAGDRVRAVTFLASGELL----TAGM 594

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           ++ + +   +                    +PQG  +A +   G +  +  +        
Sbjct: 595 RQPIRLWSPDDGRVLTSMDSLTVGVLSLAMAPQGAFVA-SGGVGGEMKVWRLPDGALMGE 653

Query: 385 LLVEDSNLQAPTWSPSGRSLI 405
           +      + A T+S  G  L 
Sbjct: 654 VPGLQGFVSAVTFSSDGAWLA 674


>gi|22298032|ref|NP_681279.1| WD-40 repeat-containing protein [Thermosynechococcus elongatus
           BP-1]
 gi|22294210|dbj|BAC08041.1| WD-40 repeat protein [Thermosynechococcus elongatus BP-1]
          Length = 349

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 90/259 (34%), Gaps = 28/259 (10%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L    D +++      +  A  +   HT  D IY  +    G          ++V+SG  
Sbjct: 81  LVSAGDDRRLYFWNLATGTALGQAKGHT--DWIYALVMTPDG----------QTVISGSK 128

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             ++ +       ++         +     SP+ + +A A+YD      V L +    + 
Sbjct: 129 DKTIKLWGVGDRQLQATLSGHQDFVNGLALSPDGRTLASASYDH----TVKLWNVPSRQE 184

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATER-LTNTLFINISA 307
              +     ++L+   S +G+             +  + DL S    R L        S 
Sbjct: 185 ITTLKANEGIMLSVAISRDGRFLA----TGGVDKLIRIWDLPSRRLLRTLEGHTSDVNSL 240

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +++PDSSQ+V  SD++G   + +      + ++    +    F    SP G  +A     
Sbjct: 241 AFTPDSSQLVSGSDKDG---IKLWNLTTGELQQQFGTEGGQVFSVAVSPDGSTLASGH-- 295

Query: 368 GEKFAIGVMKKDGSQERLL 386
                + +    G   R L
Sbjct: 296 -GDQTVKLWSLSGQLLRNL 313



 Score = 63.5 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 85/290 (29%), Gaps = 32/290 (11%)

Query: 140 IGKKFFSSPASWRKIAHTIS-----DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            G    +  + W+KIA  ++     D++        G+F           VS      L 
Sbjct: 42  AGSPLHTPTSKWQKIALAMTLRGHEDEVNAIALSPDGNFL----------VSAGDDRRLY 91

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
             +                ++    +P+ Q V   + D      + L      +    + 
Sbjct: 92  FWNLATGTALGQAKGHTDWIYALVMTPDGQTVISGSKDK----TIKLWGVGDRQLQATLS 147

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             +  +     S +G+    S   D  + +++V  +      L     I +S + S D  
Sbjct: 148 GHQDFVNGLALSPDGRTLA-SASYDHTVKLWNVPSR-QEITTLKANEGIMLSVAISRDGR 205

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              F +     + + +         R  +   +      ++P    +           I 
Sbjct: 206 ---FLATGGVDKLIRIWDLPSRRLLRTLEGHTSDVNSLAFTPDSSQLVSGSDKDG---IK 259

Query: 375 VMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +      + +     E   + +   SP G +L       GD   KL+S+ 
Sbjct: 260 LWNLTTGELQQQFGTEGGQVFSVAVSPDGSTLA---SGHGDQTVKLWSLS 306



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/127 (12%), Positives = 39/127 (30%), Gaps = 7/127 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G +   + + D     +          +    F+P+  ++   +  D     + L +  
Sbjct: 209 TGGVDKLIRIWDLPSRRLLRTLEGHTSDVNSLAFTPDSSQLVSGSDKDG----IKLWNLT 264

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                ++ G     + +   S +G     S   D+ + ++S  L       L        
Sbjct: 265 TGELQQQFGTEGGQVFSVAVSPDGSTLA-SGHGDQTVKLWS--LSGQLLRNLKGHSGAVY 321

Query: 306 SASYSPD 312
           S  +  D
Sbjct: 322 SVVFGQD 328


>gi|302679386|ref|XP_003029375.1| hypothetical protein SCHCODRAFT_58986 [Schizophyllum commune H4-8]
 gi|300103065|gb|EFI94472.1| hypothetical protein SCHCODRAFT_58986 [Schizophyllum commune H4-8]
          Length = 486

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 77/228 (33%), Gaps = 9/228 (3%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + +G    ++ V +    +   L    D I     FSP+   +A  + D    +   
Sbjct: 216 ADRLAAGSNDCTVQVKNLTTGDQITLEGHTDAINCV-VFSPDGTLIASGSDDGTVRVWDL 274

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                I         +R  + +  FSS+G+     +       I  +DL +   + + + 
Sbjct: 275 ATGKHIGEPFTAFATYRREVSSVAFSSDGQHVAAGLNDC---TIRILDLATRKEQFVLHG 331

Query: 301 LF--INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQ 357
                  S +YSPD   +           +++  ++   +     Q  E+      +SP 
Sbjct: 332 CGWLWVNSVAYSPDGQIVAAAYYDTSHP-IWLWDASSGQKIGHALQGHESPVNSLAFSPD 390

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           G  IA +        +  +         L  +  + +  ++  GR ++
Sbjct: 391 GKYIA-SGSDDNTVRLWSVSAGRQVGVTLRHEDYVNSVAFASHGRFIV 437



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 57/332 (17%), Positives = 107/332 (32%), Gaps = 57/332 (17%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           +LVTG   +          RLWDV    Q+            R +A   S D        
Sbjct: 44  LLVTGSWRER-------VLRLWDVATGDQLDNM-LIGHLRDIRVLA--FSPD-------- 85

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                         + SG    ++ V D      +  +    D+ +    FSP+ + +A 
Sbjct: 86  -----------GTRLASGSRDCTVRVWDILTRQALGDVVGRHDEYVNCLAFSPDGRCIA- 133

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            +  D+  +RV+ +   +             I +   S + +R   S  +D  +  +  D
Sbjct: 134 -SGADDRTIRVWDIPDAVRGDLSDAKAHNMAIHSIALSPDARRI-FSGSEDRTVRGW--D 189

Query: 289 LQSN-ATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            ++     ++       I S +YSP + ++       G     V   N +   +I+ +  
Sbjct: 190 AETGEGLGKIIEGCGYQIKSVAYSPTADRLA-----AGSNDCTVQVKNLTTGDQITLEGH 244

Query: 347 ASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSP 399
               +  V+SP G LIA     G    + V      +               + +  +S 
Sbjct: 245 TDAINCVVFSPDGTLIASGSDDGT---VRVWDLATGKHIGEPFTAFATYRREVSSVAFSS 301

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            G+ +       G     +  +DL  R E  +
Sbjct: 302 DGQHVA-----AGLNDCTIRILDLATRKEQFV 328



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 68/182 (37%), Gaps = 18/182 (9%)

Query: 188 IIKNSLCVMDR-DGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
              N+L V    DG  IR +     D  +     SP+   +   ++  E +LR++ + T 
Sbjct: 5   SQDNTLRVWHWPDGRQIRSISLQIGDARVRCAALSPDGGLLVTGSWR-ERVLRLWDVATG 63

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  IG+ R + +   FS +G R   S  +D  + ++  D+ +     L + +  + 
Sbjct: 64  DQLDNMLIGHLRDIRVL-AFSPDGTRLA-SGSRDCTVRVW--DILTRQA--LGDVVGRHD 117

Query: 306 S----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGD 359
                 ++SPD   I   +D      + V     + +  +S  K  +        SP   
Sbjct: 118 EYVNCLAFSPDGRCIASGAD---DRTIRVWDIPDAVRGDLSDAKAHNMAIHSIALSPDAR 174

Query: 360 LI 361
            I
Sbjct: 175 RI 176



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 1/99 (1%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A+ SPD   +V  S RE   +L+ + + G     +            +SP G  +A    
Sbjct: 36  AALSPDGGLLVTGSWRERVLRLWDV-ATGDQLDNMLIGHLRDIRVLAFSPDGTRLASGSR 94

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                   ++ +    + +   D  +    +SP GR + 
Sbjct: 95  DCTVRVWDILTRQALGDVVGRHDEYVNCLAFSPDGRCIA 133


>gi|297202574|ref|ZP_06919971.1| WD40 domain-containing protein [Streptomyces sviceus ATCC 29083]
 gi|197709897|gb|EDY53931.1| WD40 domain-containing protein [Streptomyces sviceus ATCC 29083]
          Length = 461

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 73/234 (31%), Gaps = 44/234 (18%)

Query: 187 GIIKNSLCVMD-RDGANIRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLM 242
           G   + + + D   G  + +     +     P     SP+ +   Y   D  +   V  +
Sbjct: 170 GAESSEVWIHDIATGQRVGFGIEVPEGFTGRPAEISVSPDGRYAVYTLQDSAEHTSVVFL 229

Query: 243 DTRIDRAPKRI-----GNFRSMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQS 291
             RI    +RI              P  S +G+R +         + D+  D++  D  +
Sbjct: 230 RDRIKGTTERISHPRPTWEPRNAYQPTVSDDGRRIVYQYNYANGPRGDDWGDVWMYDRTT 289

Query: 292 NATERLTNTLFINIS--------ASYSPDSSQIVFES--------DREGKEQLYVMQSNG 335
               ++      + S         S S D   +VFES        D +    ++V     
Sbjct: 290 GEHTQI--DRSYDGSGTEKESLNPSISGDGRTVVFESRDTHLVPGDTDASWNVFVHTLRT 347

Query: 336 SDQKRI--SQDKEASYF--DPVWSPQGDLIAFT-------KFSGEKFAIGVMKK 378
              +RI  +Q         +   S  G  + FT          G+++ + +   
Sbjct: 348 GTNQRIHGTQGGPGEVHTRNAAISADGRYLTFTSEVTEPGSRYGKEYPVYLRDL 401



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 78/256 (30%), Gaps = 40/256 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S + + +A A+  ++    V      +         F          ++G+  + +   
Sbjct: 112 ISRDGRHIALASDAEDLDPNVPHGGMYLRDPHTGKLRFAGFGGLVAVLNDGRY-VYAEYG 170

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINI---------SASYSPDSSQIVFE--SDREGKEQ 327
            E+ +++  D+ +           I +           S SPD    V+      E    
Sbjct: 171 AESSEVWIHDIATGQRV----GFGIEVPEGFTGRPAEISVSPDGRYAVYTLQDSAEHTSV 226

Query: 328 LYVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAF------TKFSGEKFAIGVMK 377
           +++        +RIS  +      + + P  S  G  I +           +   + +  
Sbjct: 227 VFLRDRIKGTTERISHPRPTWEPRNAYQPTVSDDGRRIVYQYNYANGPRGDDWGDVWMYD 286

Query: 378 KDGSQERLLVEDSNLQA-------PTWSPSGRSLIFSRKK------DGDTGSKLYSIDL- 423
           +   +   +    +          P+ S  GR+++F  +       D D    ++   L 
Sbjct: 287 RTTGEHTQIDRSYDGSGTEKESLNPSISGDGRTVVFESRDTHLVPGDTDASWNVFVHTLR 346

Query: 424 NGRNETLINTPAYASD 439
            G N+ +  T     +
Sbjct: 347 TGTNQRIHGTQGGPGE 362



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 57/203 (28%), Gaps = 27/203 (13%)

Query: 258 SMILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSP 311
                   S +G+   ++   ++         +Y  D  +                +   
Sbjct: 105 GETRTAVISRDGRHIALASDAEDLDPNVPHGGMYLRDPHTGKLR----FAGFGGLVAVLN 160

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQGDLIAFTKFS 367
           D    V+        ++++       +      + +       +   SP G    +T   
Sbjct: 161 DGRY-VYAEYGAESSEVWIHDIATGQRVGFGIEVPEGFTGRPAEISVSPDGRYAVYTLQD 219

Query: 368 GEKFAIGVMKKD---GSQERL-----LVEDSNLQAPTWSPSGRSLIFSRKKD----GDTG 415
             +    V  +D   G+ ER+       E  N   PT S  GR +++         GD  
Sbjct: 220 SAEHTSVVFLRDRIKGTTERISHPRPTWEPRNAYQPTVSDDGRRIVYQYNYANGPRGDDW 279

Query: 416 SKLYSIDLNGRNETLINTPAYAS 438
             ++  D      T I+     S
Sbjct: 280 GDVWMYDRTTGEHTQIDRSYDGS 302



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 47/157 (29%), Gaps = 22/157 (14%)

Query: 300 TLFINISASYSPDSSQIVFESDREG------KEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                 +A  S D   I   SD E          +Y+   +    +        +  +  
Sbjct: 103 GNGETRTAVISRDGRHIALASDAEDLDPNVPHGGMYLRDPHTGKLRFAGFGGLVAVLN-- 160

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAP---TWSPSGRSLIFS 407
               G  + + ++  E   + +      Q     + V +     P   + SP GR  +++
Sbjct: 161 ---DGRYV-YAEYGAESSEVWIHDIATGQRVGFGIEVPEGFTGRPAEISVSPDGRYAVYT 216

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            +   +  S ++  D        I+ P     P W  
Sbjct: 217 LQDSAEHTSVVFLRDRIKGTTERISHPR----PTWEP 249


>gi|298251678|ref|ZP_06975481.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297546270|gb|EFH80138.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 396

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 81/239 (33%), Gaps = 16/239 (6%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            I   ++ + +       +        +    +SP+ + +  A++D  + ++V+      
Sbjct: 171 DIWAYTVQMWNATNGTPVFTYTGHSDSVSAVAWSPDGKHIVSASWD--NTVQVWEAANGT 228

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                 +G   S  L   +S +GKR   +            D    +   +   + ++ +
Sbjct: 229 LAYTH-VGVGTSAQLG--WSPDGKRLFCNSDHRTESW----DASDGSDVIVYPDVLVDDT 281

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSN---GSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            ++SPD   +   S    + +++ + +    G      +    +   D  WSP G  IA 
Sbjct: 282 VAWSPDHQCLAVYSQDNTELEVWRVSTGKLLGHYPVHGNWFDSSGVNDVAWSPDGKRIA- 340

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           T    +   +       +          +    WSP GR +  +     D   +++S D
Sbjct: 341 TSSDDKTVQVCDALTGRNVFAYTGHSDKVTGIAWSPDGRFIASASD---DKTVQVWSPD 396



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 72/248 (29%), Gaps = 36/248 (14%)

Query: 219 FSPNQQKVAYATY---------DDEDILRVY-----LMDTRIDRAPKRIGNFRSMILAPR 264
           +SP+ Q +A                +I  ++     + +                + A  
Sbjct: 143 WSPDGQFIAAPVNSIVGQKPPDSHGNIFDIWAYTVQMWNATNGTPVFTYTGHSDSVSAVA 202

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--YSPDSSQIVFESDR 322
           +S +GK  + S   D  + ++     +         + +  SA   +SPD  ++   SD 
Sbjct: 203 WSPDGKHIV-SASWDNTVQVWE--AANGTLAY--THVGVGTSAQLGWSPDGKRLFCNSDH 257

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--- 379
               +     ++      +  D         WSP    +A       +  +  +      
Sbjct: 258 ----RTESWDASDGSDVIVYPDVLVDDTV-AWSPDHQCLAVYSQDNTELEVWRVSTGKLL 312

Query: 380 GSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           G         + S +    WSP G+ +  S     D   ++    L GRN       +  
Sbjct: 313 GHYPVHGNWFDSSGVNDVAWSPDGKRIATSSD---DKTVQVCDA-LTGRNVFAYTGHSDK 368

Query: 438 SDP-QWVG 444
                W  
Sbjct: 369 VTGIAWSP 376


>gi|332704969|ref|ZP_08425055.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332356321|gb|EGJ35775.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 560

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 73/254 (28%), Gaps = 17/254 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + +     +          +     SP+ Q +        D   +   +  
Sbjct: 292 SGHSDGTISLWNLSTGQLIRTWRGHGGAVNAVAISPDGQTLV----SGGDDRMIKTWNLN 347

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +    +   +  +    FS + K  + S   D  + I+ +  +      LT  L    
Sbjct: 348 TGKPLSTLTGHQDTVATLAFSGDSKTLV-SGSWDNTIKIWQLP-KGKLLHTLTGHLGSVN 405

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S   SPD   +V  S       + +         RI +    S      S  G  +A   
Sbjct: 406 SVEISPDGKTLVSGSQ---DTTIRLWNLATGKLVRIFKGHSRSVSSVAISLDGKTLA--- 459

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             G    I +   +  +    +        + T +  G +LI       D   KL+ +  
Sbjct: 460 SGGGDGTIRLWNLNTGKLTRTLTGHTDGVWSVTMTRDGSTLISGSW---DKTIKLWDMRS 516

Query: 424 NGRNETLINTPAYA 437
                TL     Y 
Sbjct: 517 AQLKSTLNGHSGYV 530



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 63/207 (30%), Gaps = 17/207 (8%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           + L +    +  +        + A   S +G+  + S   D  +  ++++        LT
Sbjct: 299 ISLWNLSTGQLIRTWRGHGGAVNAVAISPDGQTLV-SGGDDRMIKTWNLN-TGKPLSTLT 356

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  + ++S DS  +V  S       + + Q               S      SP G
Sbjct: 357 GHQDTVATLAFSGDSKTLVSGS---WDNTIKIWQLPKGKLLHTLTGHLGSVNSVEISPDG 413

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             +           I +      +   +      ++ +   S  G++L       GD   
Sbjct: 414 KTLVSGSQDTT---IRLWNLATGKLVRIFKGHSRSVSSVAISLDGKTLA---SGGGDGTI 467

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWV 443
           +L++++       L  T    +D  W 
Sbjct: 468 RLWNLNTG----KLTRTLTGHTDGVWS 490


>gi|83773739|dbj|BAE63864.1| unnamed protein product [Aspergillus oryzae]
          Length = 326

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 96/269 (35%), Gaps = 29/269 (10%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    ++ + D +   ++ +       +    FSP+ + ++  + D+     + L + 
Sbjct: 34  VSGSTDRTVRLWDTETGALQQILKGHSGRVLSVVFSPDGRLLSSGSEDN----IICLWEV 89

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 + +    S I +  FS NG+    S  +D  + ++  D  +   ++ T    +N
Sbjct: 90  VKGALQRTLTGHSSGIRSVVFSPNGRLLA-SGSEDRTVRLW--DTVTGKLQK-TFNGHLN 145

Query: 305 I--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S  +SP+S  +V  S     + + +  +     ++ +  +  +     +SP   L+A
Sbjct: 146 AIQSVIFSPNSYLVVSGST---DKTIRLWDTETGALQQ-TLVQSGAIRSVAFSPHDQLVA 201

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYS 420
                     +          +      + +     +SP GR L        D   +L++
Sbjct: 202 SGSRDS---IVRFWDLATGAPQQTFNGHSDRIHLVAFSPDGRLLATGSH---DQTVRLWN 255

Query: 421 IDLNGRNETLINTPA------YASDPQWV 443
           I   G     +N         +A D  ++
Sbjct: 256 I-ATGALLQTLNVNGLVQYLEFAPDGSYI 283



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 69/189 (36%), Gaps = 13/189 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSPN Q +   + D      V L DT      + +      +L+  FS +G R L S  
Sbjct: 25  AFSPNGQLLVSGSTDR----TVRLWDTETGALQQILKGHSGRVLSVVFSPDG-RLLSSGS 79

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D  + ++ V ++      LT       S  +SP+   +   S+      + +  +    
Sbjct: 80  EDNIICLWEV-VKGALQRTLTGHSSGIRSVVFSPNGRLLASGSE---DRTVRLWDTVTGK 135

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPT 396
            ++       +    ++SP   L+           I +   +    +  LV+   +++  
Sbjct: 136 LQKTFNGHLNAIQSVIFSPNSYLVVSGSTDKT---IRLWDTETGALQQTLVQSGAIRSVA 192

Query: 397 WSPSGRSLI 405
           +SP  + + 
Sbjct: 193 FSPHDQLVA 201



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 70/186 (37%), Gaps = 15/186 (8%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSP 311
           +   ++ I +  FS NG + L+S   D  + ++  D ++ A ++ L       +S  +SP
Sbjct: 14  LDTLQTGISSVAFSPNG-QLLVSGSTDRTVRLW--DTETGALQQILKGHSGRVLSVVFSP 70

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   +   S       + + +      +R      +     V+SP G L+A      E  
Sbjct: 71  DGRLL---SSGSEDNIICLWEVVKGALQRTLTGHSSGIRSVVFSPNGRLLA---SGSEDR 124

Query: 372 AIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + +      + +          Q+  +SP+   ++       D   +L+  +     +T
Sbjct: 125 TVRLWDTVTGKLQKTFNGHLNAIQSVIFSPNSYLVVSGST---DKTIRLWDTETGALQQT 181

Query: 430 LINTPA 435
           L+ + A
Sbjct: 182 LVQSGA 187



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 61/191 (31%), Gaps = 32/191 (16%)

Query: 105 SLGAQVLVT---GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
           S G + +V    GR++  G +   V  RLWD    K  + K F     + + +  + +  
Sbjct: 102 SSGIRSVVFSPNGRLLASGSEDRTV--RLWDTVTGK--LQKTFNGHLNAIQSVIFSPNSY 157

Query: 162 IY-------------------QSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGA 201
           +                    Q    + G   S      +  V SG   + +   D    
Sbjct: 158 LVVSGSTDKTIRLWDTETGALQQTLVQSGAIRSVAFSPHDQLVASGSRDSIVRFWDLATG 217

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             +         +    FSP+ + +A  ++D      V L +       + + N   ++ 
Sbjct: 218 APQQTFNGHSDRIHLVAFSPDGRLLATGSHDQ----TVRLWNIATGALLQTL-NVNGLVQ 272

Query: 262 APRFSSNGKRA 272
              F+ +G   
Sbjct: 273 YLEFAPDGSYI 283


>gi|226307289|ref|YP_002767249.1| S9 family peptidase [Rhodococcus erythropolis PR4]
 gi|226186406|dbj|BAH34510.1| putative S9 family peptidase [Rhodococcus erythropolis PR4]
          Length = 678

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 82/265 (30%), Gaps = 30/265 (11%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V S      +  M   G  +R+               P+   +  A  D ++ + +  
Sbjct: 155 DQVRSARKDKKVTAMLHTGYPVRHWDHDLG---------PDHPHLVVAETDSKESVELRD 205

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNATER 296
           +      A +              S +G   + +    +A       +  +D  +     
Sbjct: 206 ITPTAAAALRETST--------TISDDGLFVVTTWTVGDASAARRSTLVRIDTVTGDRTT 257

Query: 297 LTNTLFINI-SASYSPDSSQIVFESDREGKEQ------LYVMQSNGSDQKRISQDKEASY 349
           L +    ++ +   SPD +++ F  +     +      L +          ++   +   
Sbjct: 258 LVDEADADVYNPVLSPDGTKLAFIRETLTTPEFAPRMTLQLYDFGSGAVTGVADGWDRWP 317

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               W P G  +  T   G +  I  +   G   RL  +D+       +P G S+ ++ +
Sbjct: 318 TSLAWLPDGSGLVVTADDGGRGPIFTIDLWGQPVRLTADDAAYTDVRVAPDGESI-YALR 376

Query: 410 KDGDTGSKLYSIDLNGRNETLINTP 434
              +    +  +DL     T +  P
Sbjct: 377 ASYEAPPHVVRVDLGSGEITALRGP 401



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 65/209 (31%), Gaps = 7/209 (3%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++ +         R I  T +  + ++ T    D    +   +    S   +++L  +D 
Sbjct: 191 VVAETDSKESVELRDITPTAAAALRETSTTISDDGLFVVTTWTVGDASAARRSTLVRIDT 250

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNF 256
              +   L    D  ++ P  SP+  K+A+   T    +      +      +    G  
Sbjct: 251 VTGDRTTLVDEADADVYNPVLSPDGTKLAFIRETLTTPEFAPRMTLQLYDFGSGAVTGVA 310

Query: 257 RSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                 P    +  +G   +++        I+++DL      RLT           +PD 
Sbjct: 311 DGWDRWPTSLAWLPDGSGLVVTADDGGRGPIFTIDL-WGQPVRLTADDAAYTDVRVAPDG 369

Query: 314 SQI-VFESDREGKEQLYVMQSNGSDQKRI 341
             I    +  E    +  +     +   +
Sbjct: 370 ESIYALRASYEAPPHVVRVDLGSGEITAL 398



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 80/296 (27%), Gaps = 74/296 (25%)

Query: 220 SPNQQKV--AYATYDDEDILRV---YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+   +  A A  DD+    V   + +D    R  +R+    +      F+ +G     
Sbjct: 32  SPDGSLLICARAVLDDKSAEYVSSLWEIDPEGRRPARRLTWGSTSESGAAFAFDGDVLFT 91

Query: 275 SVQK-----DEAMDIYSVDLQSNATERLTNTLFINIS-------ASYSPDSSQIV----- 317
           + +      D    ++ +       + L +      S        ++   +S +      
Sbjct: 92  ATRAVPGESDPQPALWRLPAAGGEAQLLISRPGGVSSVSAAKAAPTFVAQTSVMASAISL 151

Query: 318 -----FESDREGK-----------------------EQLYVMQSNGSDQKRISQDKEASY 349
                  S R+ K                         L V +++  +   +      + 
Sbjct: 152 DQDDQVRSARKDKKVTAMLHTGYPVRHWDHDLGPDHPHLVVAETDSKESVELRDITPTAA 211

Query: 350 -----FDPVWSPQGDLIAFTKFSG-----EKFAIGVMKKDGSQERLLVE--DSNLQAPTW 397
                     S  G  +  T   G      +  +  +         LV+  D+++  P  
Sbjct: 212 AALRETSTTISDDGLFVVTTWTVGDASAARRSTLVRIDTVTGDRTTLVDEADADVYNPVL 271

Query: 398 SPSGRSLIFSRKK------DGDTGSKLYSIDLNGRNETLINTPAYASDP---QWVG 444
           SP G  L F R+             +LY     G          +   P    W+ 
Sbjct: 272 SPDGTKLAFIRETLTTPEFAPRMTLQLYDF---GSGAVTGVADGWDRWPTSLAWLP 324


>gi|124005187|ref|ZP_01690029.1| WD-40 repeat [Microscilla marina ATCC 23134]
 gi|123989439|gb|EAY29000.1| WD-40 repeat [Microscilla marina ATCC 23134]
          Length = 1046

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 92/270 (34%), Gaps = 27/270 (10%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            ISD ++          +           SG +K ++     DG             ++ 
Sbjct: 40  KISDILFTPNGQSVISVSHDKTIRIWESSSGELKKTIRGQIGDG---------SQGKIYS 90

Query: 217 PRFSPNQQKVA----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
              SPN + +     ++   + +   + ++D + ++   ++     ++ +  FS +G+  
Sbjct: 91  AALSPNGRLLVVGGFFSYGTNREYGAIRIIDLKSNQMIAKLTGHTDVVFSVAFSKDGRYI 150

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             S   D+ + I+ V+ +      L          +++P+ +Q++  S     + + +  
Sbjct: 151 A-SGSGDKTIKIWEVNRK-RLVTTLKGHSNSIYEVAFAPNGNQLISGSY---DKTVKIWD 205

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSN 391
                  +             +SP G   A     G    I +    G+  + +    + 
Sbjct: 206 WQNRQVIKTLTRHNNRVQVVAYSPNGRYFA---TGGYDKRIFLWDNKGNFLKEISTNTTI 262

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           ++   +S   + L+ + K        +YS+
Sbjct: 263 VKKIRFSRDSKKLLVAAKYQ-----NIYSV 287



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 54/308 (17%), Positives = 104/308 (33%), Gaps = 30/308 (9%)

Query: 84  QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK 143
           + + + +I +      +    S   ++LV G     G +R     R+ D+K  + I    
Sbjct: 73  KKTIRGQIGDGSQGKIYSAALSPNGRLLVVGGFFSYGTNREYGAIRIIDLKSNQMIAKLT 132

Query: 144 FFSS-------PASWRKIAHTISDDIY--------QSITGEKGDFNS--RILFVSESVVS 186
             +            R IA    D           + +T  KG  NS   + F       
Sbjct: 133 GHTDVVFSVAFSKDGRYIASGSGDKTIKIWEVNRKRLVTTLKGHSNSIYEVAFAPNGNQL 192

Query: 187 GIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   V   D  N + +      +  +    +SPN +  A   YD     R++L D 
Sbjct: 193 ISGSYDKTVKIWDWQNRQVIKTLTRHNNRVQVVAYSPNGRYFATGGYDK----RIFLWDN 248

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +     K I    +++   RFS + K+ L++ +      + S DL S+    +T   +  
Sbjct: 249 K-GNFLKEISTNTTIVKKIRFSRDSKKLLVAAKYQNIYSVPSADLLSS----ITKHKYAT 303

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +A +      +   +     +++YV  +         + K    F+  ++ +G  IAF 
Sbjct: 304 GAALWGATGKYMA--TGGGDDKEVYVWNTQTGKAVSHVKGKGKPKFNIGFARKGAKIAFG 361

Query: 365 KFSGEKFA 372
                   
Sbjct: 362 NTWNSGSN 369


>gi|124009837|ref|ZP_01694505.1| WD-40 repeat [Microscilla marina ATCC 23134]
 gi|123984158|gb|EAY24519.1| WD-40 repeat [Microscilla marina ATCC 23134]
          Length = 853

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 88/249 (35%), Gaps = 22/249 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    +L + D     + +        +   +FSP+ + +A A+ D      + +  T 
Sbjct: 149 SGGADRTLKLWDAVSGKLLHTFAGHRGSVLAVKFSPDSKNIATASVDG----TIKIWGTS 204

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                K +     M+    +S++GK  + S  +D+ + +++V+   +      N   +  
Sbjct: 205 SGVIIKTLEGHADMVGTIDYSADGKWLV-SGSRDKTVKLWNVN-SGHVVHTFGNHPRLVY 262

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              + P   +I   SD      + V  ++    ++  +  +       ++  G  +    
Sbjct: 263 GVCFDPTGQRIASTSD----VNISVWNTSTFQLEKTLKGHKDHVMAVSFTTDGTYLMSGS 318

Query: 366 FSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             G      V    G   +   E  + + +   SP+G  L+      G    KL+    +
Sbjct: 319 RDGTLKKWEV--ASGRIAKEYAEPYALITSLAISPNGFYLV-----RGGKNLKLW----D 367

Query: 425 GRNETLINT 433
            +N   I +
Sbjct: 368 AKNAQKITS 376



 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 96/289 (33%), Gaps = 38/289 (13%)

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQI---IGKKFFSSPASWRKI 154
              G Q  V   V+     +           +LWD    K +    G +       +   
Sbjct: 127 TLRGHQAKVY-SVVFSPNGKYLASGGADRTLKLWDAVSGKLLHTFAGHRGSVLAVKFSPD 185

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESV----------------VSGIIKNSLCVMDR 198
           +  I+           G  +  I+   E                  VSG    ++ + + 
Sbjct: 186 SKNIATASVDGTIKIWGTSSGVIIKTLEGHADMVGTIDYSADGKWLVSGSRDKTVKLWNV 245

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           +  ++ +   +  ++++   F P  Q++A  +      + + + +T   +  K +   + 
Sbjct: 246 NSGHVVHTFGNHPRLVYGVCFDPTGQRIASTSD-----VNISVWNTSTFQLEKTLKGHKD 300

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            ++A  F+++G    +S  +D  +  + V       +       +  S + SP+   +V 
Sbjct: 301 HVMAVSFTTDGTYL-MSGSRDGTLKKWEV-ASGRIAKEYAEPYALITSLAISPNGFYLV- 357

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
              R GK  L +  +  + +    +    +     +SP G +IA     
Sbjct: 358 ---RGGKN-LKLWDAKNAQKITSLRGHFKNVNSVAFSPNGQMIASASDD 402



 Score = 43.5 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 53/162 (32%), Gaps = 12/162 (7%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +   ++ + +  FS NGK    S   D  + ++   +               ++  +SPD
Sbjct: 128 LRGHQAKVYSVVFSPNGKYLA-SGGADRTLKLWDA-VSGKLLHTFAGHRGSVLAVKFSPD 185

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDP-VWSPQGDLIAFTKFSGE 369
           S  I   +  +G  +++     G+    I  + +  A       +S  G  +  +    +
Sbjct: 186 SKNIA-TASVDGTIKIW-----GTSSGVIIKTLEGHADMVGTIDYSADGKWLV-SGSRDK 238

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +  +               +    + P+G+ +  +   +
Sbjct: 239 TVKLWNVNSGHVVHTFGNHPRLVYGVCFDPTGQRIASTSDVN 280


>gi|289642792|ref|ZP_06474929.1| serine/threonine protein kinase with WD40 repeats [Frankia symbiont
           of Datisca glomerata]
 gi|289507361|gb|EFD28323.1| serine/threonine protein kinase with WD40 repeats [Frankia symbiont
           of Datisca glomerata]
          Length = 676

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 23/229 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S    +    F+P+   +A A  D    L      +        +      + +  FS
Sbjct: 413 LTSHTSWVESIAFAPDGHTLASANGDGTIRLWDVSDRSAPRTLGAPLTGHTDRVRSVAFS 472

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDRE 323
            +G+    S   D  + ++ V  +S        LT       S +++PD   +   S   
Sbjct: 473 PDGRTLA-SASHDHTVRLWDVSDRSAPHPLGTPLTGHTDWVGSVTFAPDGRTLASAS--- 528

Query: 324 GKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK- 378
           G   + +   +      +         +      ++  G  +A      +   I +    
Sbjct: 529 GDGTIRLWDVSNRSTPHLLGVPLTGHTSWVVSVAFTRDGRTLASAS---DDHTIRLWDVS 585

Query: 379 DGSQER-----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           D +  R     L      + +  ++P GR+L       GD   +L+ + 
Sbjct: 586 DRTAPRPLGVPLTGHTGWVWSVAFTPDGRTLA---SAGGDRTVRLWDVS 631



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 76/217 (35%), Gaps = 24/217 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A A++D    L      +        +      + +  F+ +G+    S  
Sbjct: 470 AFSPDGRTLASASHDHTVRLWDVSDRSAPHPLGTPLTGHTDWVGSVTFAPDGRTLA-SAS 528

Query: 278 KDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D  + ++ V  +S        LT      +S +++ D   +   SD      + +   +
Sbjct: 529 GDGTIRLWDVSNRSTPHLLGVPLTGHTSWVVSVAFTRDGRTLASASD---DHTIRLWDVS 585

Query: 335 GSDQKRISQDKEASYFDPVWS----PQGDLIAFTKFSGEKFAIGVMKK-DGSQER----- 384
                R        +   VWS    P G  +A    +G    + +    D +  R     
Sbjct: 586 DRTAPRPLGVPLTGHTGWVWSVAFTPDGRTLA---SAGGDRTVRLWDVSDRTAPRPLGVP 642

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           L    + +++  ++  GR+L  S     D   +L+ +
Sbjct: 643 LTGHTNGVRSVAFTADGRTLASSS----DEAIRLWDM 675


>gi|114051355|ref|NP_001040373.1| WD repeat domain 61 [Bombyx mori]
 gi|95102668|gb|ABF51272.1| WD repeat domain 61 [Bombyx mori]
          Length = 329

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 89/254 (35%), Gaps = 21/254 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRD-GA-NIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           +S+       +++G + + + V   D G   I++        +     SP+ + +A ++ 
Sbjct: 49  DSQKESAENYIITGGLDDYIKVWQLDNGKLEIKHQLEGHSLGVISVAVSPDGKTLASSSQ 108

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D   IL   +   ++      + +  ++     FS +GK  +       A  I    ++S
Sbjct: 109 DSSLILWNLISGEKLKMFETGLTDVWTLD----FSPDGKHVI---SGSNAGKILIFGVES 161

Query: 292 NATERLTNTLFINI-SASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEAS 348
              E++ +T      S +YSPD   I       G     + +            +    S
Sbjct: 162 GKQEQVLDTRGKFTLSVAYSPDGKYIA-----SGALDGIINIFDVAQGKLVHTLEGHAMS 216

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                +SP   L+      G      V+  + +   L    S + +  +SP G+  +   
Sbjct: 217 IRSLCFSPDSQLLLTGSDDGHMKLYDVVHANLAG-TLSGHASWVLSVAFSPDGKRFV--- 272

Query: 409 KKDGDTGSKLYSID 422
               D   +++ +D
Sbjct: 273 SGSADRTVRVWDLD 286


>gi|119182907|ref|XP_001242553.1| hypothetical protein CIMG_06449 [Coccidioides immitis RS]
          Length = 782

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 75/210 (35%), Gaps = 16/210 (7%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R L+ + +    +  N +C   +    +          ++   FS +  K+A  + D   
Sbjct: 418 RCLYHNTAEPPSLYSNHMCDRSQFPTQVTLELNQHTNEVWYLEFSHDGTKLATTSSDR-- 475

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              V + DTR      ++ +    +    +S +  +  IS  +D    ++  D+++    
Sbjct: 476 --SVIIYDTRTFGVIHKLTDHGGPVAFATWSPDDTKL-ISCSQDCKARLW--DVETG-RC 529

Query: 296 RLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            LT  +      SA+++PDS   V  S  + K QL +   +G      +    +   D  
Sbjct: 530 LLTIDHHREPVTSAAWAPDSESFVTCSL-DNKSQLCLWSVHGD--PLYTWAGSSRIRDCA 586

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            SP G  +           I V      +E
Sbjct: 587 ISPDGRRLIAISTDR---RIHVYNFPTREE 613



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 56/167 (33%), Gaps = 14/167 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G +   +        +   D ++     +LT+       A++SPD ++++  S  +
Sbjct: 461 FSHDGTKLATTSS---DRSVIIYDTRTFGVIHKLTDHGGPVAFATWSPDDTKLISCSQ-D 516

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            K +L+                        W+P  +         +   + +    G   
Sbjct: 517 CKARLW--DVETGRCLLTIDHHREPVTSAAWAPDSESFVTCSLDNKS-QLCLWSVHGDPL 573

Query: 384 RLLVEDSNLQAPTWSPSGRS-LIFSRKK-----DGDTGSKLYSIDLN 424
                 S ++    SP GR  +  S  +     +  T  + YS+ L+
Sbjct: 574 YTWAGSSRIRDCAISPDGRRLIAISTDRRIHVYNFPTREEEYSMRLD 620



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 82/258 (31%), Gaps = 19/258 (7%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ--SITGEKGDFNSRILFVSESVVSG 187
           L D   + QI    + ++       ++ + D       +T E     + + ++  S    
Sbjct: 407 LLDQVKQNQINRCLYHNTAEPPSLYSNHMCDRSQFPTQVTLELNQHTNEVWYLEFSHDGT 466

Query: 188 II-----KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +       S+ + D     + +        +    +SP+  K+   + D +      L 
Sbjct: 467 KLATTSSDRSVIIYDTRTFGVIHKLTDHGGPVAFATWSPDDTKLISCSQDCK----ARLW 522

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    R    I + R  + +  ++ + +   ++   D    +    +  +          
Sbjct: 523 DVETGRCLLTIDHHREPVTSAAWAPDSES-FVTCSLDNKSQLCLWSVHGDPLYTW-AGSS 580

Query: 303 INISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                + SPD  +++  S DR    +++V      +++  S   +        S     +
Sbjct: 581 RIRDCAISPDGRRLIAISTDR----RIHVYNFPTREEE-YSMRLDLDLTCINISSDSRYM 635

Query: 362 AFTKFSGEKFAIGVMKKD 379
                 GE   + +  KD
Sbjct: 636 LVNMSEGEVQLLDIETKD 653


>gi|238917989|ref|YP_002931503.1| hypothetical protein NT01EI_0006 [Edwardsiella ictaluri 93-146]
 gi|238867557|gb|ACR67268.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 432

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 52/162 (32%), Gaps = 20/162 (12%)

Query: 280 EAMDIYSVDLQSNATERLT-----NTLFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
             +             RLT         +      +   +PD S I F   D +G  QL+
Sbjct: 276 GTLSSLPAPPAGICQRRLTFTHQRRHPGLATVPRHWVRSAPDGSAIAFLMRDEQGVVQLW 335

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++  NG + ++I+           W P G  +     +    ++            +   
Sbjct: 336 LISPNGGEARQITHGAHDVQSAFNWHPDGRSVLMVMDN----SVVRCDVASGAVTRIT-G 390

Query: 390 SNLQAPTW-----SPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              Q P       SP GR + + R+ +G T   +  +  +G 
Sbjct: 391 RTAQPPCADAVIPSPDGRWVAYMREVNGWTQIFVARLTSDGE 432



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 43/136 (31%), Gaps = 12/136 (8%)

Query: 256 FRSMILAPR-F---SSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISA-SY 309
              +   PR +   + +G      ++ +   + ++ +        ++T+      SA ++
Sbjct: 301 HPGLATVPRHWVRSAPDGSAIAFLMRDEQGVVQLWLISPNGGEARQITHGAHDVQSAFNW 360

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFS 367
            PD   ++   D      +           RI+            + SP G  +A+ +  
Sbjct: 361 HPDGRSVLMVMDNS----VVRCDVASGAVTRITGRTAQPPCADAVIPSPDGRWVAYMREV 416

Query: 368 GEKFAIGVMKKDGSQE 383
                I V +     E
Sbjct: 417 NGWTQIFVARLTSDGE 432



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 54/149 (36%), Gaps = 25/149 (16%)

Query: 208 PSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                +   PR     +P+   +A+   D++ +++++L+      A +       +  A 
Sbjct: 299 RRHPGLATVPRHWVRSAPDGSAIAFLMRDEQGVVQLWLISPNGGEARQITHGAHDVQSAF 358

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY------SPDSSQIV 317
            +  +G+  L+ +       +   D+ S A  R+T                 SPD   + 
Sbjct: 359 NWHPDGRSVLMVMDNS----VVRCDVASGAVTRIT---GRTAQPPCADAVIPSPDGRWVA 411

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +  +  G  Q++V         R++ D E
Sbjct: 412 YMREVNGWTQIFVA--------RLTSDGE 432



 Score = 43.9 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 3/100 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++  +G   R +T     +     + P+ + V      D  ++R  +    + R   
Sbjct: 333 QLWLISPNGGEARQITHGAHDVQSAFNWHPDGRSVL--MVMDNSVVRCDVASGAVTRITG 390

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           R         A   S +G+      + +    I+   L S
Sbjct: 391 RTAQPPCAD-AVIPSPDGRWVAYMREVNGWTQIFVARLTS 429


>gi|255086421|ref|XP_002509177.1| predicted protein [Micromonas sp. RCC299]
 gi|226524455|gb|ACO70435.1| predicted protein [Micromonas sp. RCC299]
          Length = 1132

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 11/124 (8%)

Query: 293 ATERLTNTLFINISASYS---PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
              +LT    I    SYS   P+ + +VF+   +   ++ V+    +    ++  K  + 
Sbjct: 391 TETQLTKGGKIRGVMSYSDVSPEGTALVFD---DTYGKISVLNLTSTA---VNTAKPEAA 444

Query: 350 FDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFS 407
            D  WSP G  +AF+     +F+ + V   +  + + L   S N   P +SP G  L + 
Sbjct: 445 GDYSWSPDGKWLAFSASDASEFSCVHVWNVETGETQRLTHPSYNAVEPKFSPDGFFLYYF 504

Query: 408 RKKD 411
             + 
Sbjct: 505 SDQQ 508



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 84/261 (32%), Gaps = 13/261 (4%)

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +    +K F+     R++A +  D  Y ++      F + +L    + +  + K+   V 
Sbjct: 287 RAAAEQKIFAPLEELRELALS-QDGFYAALVIRGQIFFTPLLEQLGTRIEQVTKHDGAVR 345

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
            R        + S    +     S    +  Y   + +   +        +    + G  
Sbjct: 346 YR--HVQFVKSDSVSDNMKIIAMSDASGEYEYVLLERQKGGKK--GAPWTETQLTKGGKI 401

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           R ++     S  G   +     D    I  ++L S A    T         S+SPD   +
Sbjct: 402 RGVMSYSDVSPEGTALVF---DDTYGKISVLNLTSTAVN--TAKPEAAGDYSWSPDGKWL 456

Query: 317 VFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            F  SD      ++V      + +R++     +  +P +SP G  + +      +   G 
Sbjct: 457 AFSASDASEFSCVHVWNVETGETQRLTH-PSYNAVEPKFSPDGFFLYYFSDQQIESEAGS 515

Query: 376 -MKKDGSQERLLVEDSNLQAP 395
                G +   L     +  P
Sbjct: 516 PYGARGGEPSYLGTQQLMCLP 536



 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 68/190 (35%), Gaps = 25/190 (13%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   +   + +    ++       A  R++ +  +      + D + I F ++     ++
Sbjct: 11  GDALVFVSEGN----VWFTKKSGGAAARISASYSVEALPKLNEDGTLIAFLAESIDGYEV 66

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLL 386
           + +   G   KR+S    A+     W+ +G ++  T F        +  +  D S+  +L
Sbjct: 67  FTLPVAGGVAKRVSY-GSAAVRLEGWTREGKILVVTSFFSPTGLAQLAEVDPDTSEMTVL 125

Query: 387 ----VEDSNLQAPTWSPSGRSLIF-------SRKKDGDTGSKLYSIDLNGRNE-TLINTP 434
                             G  + +       +++ +G   S+L+    +G +E TL+   
Sbjct: 126 PFARASGGTQDQ-----DGCYVFYPLRQTSATKRYEGGEQSRLWR-WCDGDDEATLLTPE 179

Query: 435 AYASDPQWVG 444
           +++    W  
Sbjct: 180 SWSKRGAWSP 189



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 25/225 (11%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              + + +  +           +   A  RI    S+   P+ + +G       +  +  
Sbjct: 11  GDALVFVSEGN------VWFTKKSGGAAARISASYSVEALPKLNEDGTLIAFLAESIDGY 64

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQK- 339
           +++++ +     +R++          ++ +   +V  S     G  QL  +  + S+   
Sbjct: 65  EVFTLPVAGGVAKRVSYGSAAVRLEGWTREGKILVVTSFFSPTGLAQLAEVDPDTSEMTV 124

Query: 340 ----RISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVEDSNLQA 394
               R S   +      V+ P     A  ++ G  +  +        +  LL  +S  + 
Sbjct: 125 LPFARASGGTQDQDGCYVFYPLRQTSATKRYEGGEQSRLWRWCDGDDEATLLTPESWSKR 184

Query: 395 PTWSP-------SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             WSP           + F     G   +  + ++ +G  +  + 
Sbjct: 185 GAWSPVTSPEFPD--QIFFISDHSGVANA--WVMNKDGSGKRQLT 225



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 15/222 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +    + G     ++ S   +   P+ + +   +A+      D   V+ +        KR
Sbjct: 22  VWFTKKSGGAAARISASYS-VEALPKLNEDGTLIAFLAESI-DGYEVFTLPV-AGGVAKR 78

Query: 253 IGNFRSMILAPRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISA--- 307
           +    + +    ++  GK  +++          +  VD  ++    L        +    
Sbjct: 79  VSYGSAAVRLEGWTREGKILVVTSFFSPTGLAQLAEVDPDTSEMTVLPFARASGGTQDQD 138

Query: 308 ---SYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDK--EASYFDPVWSPQ-GDL 360
               + P       +    G++ +L+       +   ++ +   +   + PV SP+  D 
Sbjct: 139 GCYVFYPLRQTSATKRYEGGEQSRLWRWCDGDDEATLLTPESWSKRGAWSPVTSPEFPDQ 198

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           I F           VM KDGS +R L    ++     +  G+
Sbjct: 199 IFFISDHSGVANAWVMNKDGSGKRQLTNSCDMDVMEITIDGK 240



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 69/222 (31%), Gaps = 27/222 (12%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             +  +   G   + ++     +  E  ++   + +   ++     L   L +   D + 
Sbjct: 64  YEVFTLPVAGGVAKRVSYGSAAVRLE-GWTREGKILVVTSFFSPTGL-AQLAEVDPDTSE 121

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-- 308
             +  F       +   +G      +++  A   Y    +     RL      +  A+  
Sbjct: 122 MTVLPFARASGGTQ-DQDGCYVFYPLRQTSATKRY----EGGEQSRLWRWCDGDDEATLL 176

Query: 309 ----------YSP-----DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                     +SP        QI F SD  G    +VM  +GS +++++   +    +  
Sbjct: 177 TPESWSKRGAWSPVTSPEFPDQIFFISDHSGVANAWVMNKDGSGKRQLTNSCDMDVMEIT 236

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
               G      +  G      +   +   E+ L     ++AP
Sbjct: 237 I--DGKD-GIARIGGGLHKFRLDAAELGNEKELEGAILVEAP 275


>gi|75911009|ref|YP_325305.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75704734|gb|ABA24410.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 1477

 Score = 68.5 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 105/274 (38%), Gaps = 31/274 (11%)

Query: 157 TISDDIYQ--SITGEKGD-----FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            I D I++   +TG +G      F+     +  S   G    ++ + D  G   +    +
Sbjct: 707 KILDKIFEVNQLTGHQGWVRGIRFSPNGRLIVTSGSDG----TVRIWDYLGK-QQIEFKA 761

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    FSP+ + +A A+ D   ++R++ +   +    K     +++I    FS + 
Sbjct: 762 HWGSILSVNFSPDSKLIATASDD--GMVRIWNLLGEMLSEYK----HQNVIRDVAFSPDS 815

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           K  + +  +D  ++++S+  +    +          S S S D   I       GK+++ 
Sbjct: 816 KFIV-TGGEDGDINLWSLQ-EKQKIKNWMAEQGAIYSLSISSDGQYIA----TAGKDRIA 869

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            + +    +    +    S+    +SP G L+A    +G+     + K  G Q       
Sbjct: 870 KLWNLVGQKLSEFKSPNGSFRSISFSPDGRLLA---TAGDDSKARLWKLSGEQLAEFKGH 926

Query: 390 -SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              ++  ++SP G+ L        D   +L+ + 
Sbjct: 927 VGWVRDVSFSPDGKLLA---TAGDDGKVRLWHLS 957



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 85/252 (33%), Gaps = 27/252 (10%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G+   +   V+         NSL    R   N+  L  +   +   P FSP    +   
Sbjct: 650 QGNALEQSGIVAMQQFDSEELNSLIKSIRSARNLENLVKNGTSLENYPAFSP----LFAL 705

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
               + I  V            ++   +  +   RFS NG+  + S   D  + I+  D 
Sbjct: 706 QKILDKIFEVN-----------QLTGHQGWVRGIRFSPNGRLIVTSGS-DGTVRIW--DY 751

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                          +S ++SPDS  I   SD +G  +++     G          +   
Sbjct: 752 LGKQQIEFKAHWGSILSVNFSPDSKLIATASD-DGMVRIW--NLLGEMLSE--YKHQNVI 806

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            D  +SP    I  T        +  +++    +  + E   + + + S  G+ +     
Sbjct: 807 RDVAFSPDSKFIV-TGGEDGDINLWSLQEKQKIKNWMAEQGAIYSLSISSDGQYIA---T 862

Query: 410 KDGDTGSKLYSI 421
              D  +KL+++
Sbjct: 863 AGKDRIAKLWNL 874



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 76/205 (37%), Gaps = 18/205 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +        +   + L   +  +  K     +  I +   SS+G+    +  
Sbjct: 810 AFSPDSKFIV----TGGEDGDINLWSLQEKQKIKNWMAEQGAIYSLSISSDGQYIA-TAG 864

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           KD    ++  +L         +      S S+SPD   +    D + K +L+ +     +
Sbjct: 865 KDRIAKLW--NLVGQKLSEFKSPNGSFRSISFSPDGRLLATAGD-DSKARLWKLS---GE 918

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPT 396
           Q    +       D  +SP G L+A    +G+   + +    G Q          + +  
Sbjct: 919 QLAEFKGHVGWVRDVSFSPDGKLLA---TAGDDGKVRLWHLSGKQLIEFKGHQGGVLSVR 975

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
           +SP+ + L        D+ +K++S+
Sbjct: 976 FSPNKKLLA---TTGTDSNAKVWSL 997



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 14/114 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-- 264
             S +       FSP+ + +A A  D +  L           + +++  F+  +   R  
Sbjct: 882 FKSPNGSFRSISFSPDGRLLATAGDDSKARL--------WKLSGEQLAEFKGHVGWVRDV 933

Query: 265 -FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            FS +GK    +   D  + ++   L               +S  +SP+   + 
Sbjct: 934 SFSPDGKLLA-TAGDDGKVRLW--HLSGKQLIEFKGHQGGVLSVRFSPNKKLLA 984



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 55/177 (31%), Gaps = 12/177 (6%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILA 262
            +  RD  ++   FS + QK+  A T        V       D + K +  F+     + +
Sbjct: 1276 SKDRDVGVYSMNFSQDGQKILIAGTLQVNRYSIVDSPVQLRDISGKMLAEFKGHRGGVFS 1335

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              FS + K+ L +   D  + ++  DL      +         S  +  D+ +I      
Sbjct: 1336 ANFSPDQKQVL-TGGMDGTVRLW--DLSGVQQSQWKAHKGWVRSVIFI-DNQRIATV--- 1388

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             G + L  + S    Q       +       +      I  + + G      +    
Sbjct: 1389 -GDDGLVKLWSRSGQQLAEFAGHQGKISSIAFRAVDQTIVTSGYDGTVRTWHIDNLS 1444


>gi|312130675|ref|YP_003998015.1| peptidase s9 prolyl oligopeptidase active site domain protein
           [Leadbetterella byssophila DSM 17132]
 gi|311907221|gb|ADQ17662.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Leadbetterella byssophila DSM 17132]
          Length = 709

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            +LY++  +      ++Q KE        SP G +IAF +   +K  I ++   G +   
Sbjct: 64  NKLYLLSEDRKSSIALTQGKEG-VGQAEISPDGKMIAFVRRVKDKSQIFILPLSGGEPWQ 122

Query: 386 LVED-SNLQAPTWSPSGRSLIFS 407
           L        +P +SP G+ +++S
Sbjct: 123 LTHSKYGASSPKFSPDGKRILYS 145



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 78/213 (36%), Gaps = 21/213 (9%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-----------MD 283
               ++ ++ + +   + + +  +      ++ +G+   +S  KD             + 
Sbjct: 230 SFSHLFEIEVKENAQARALTSGFASYNGANYAPDGRSIFVSTAKDADEHPDRESENKIVQ 289

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIV-FESDREG--KEQLYVMQSNGSDQKR 340
           I   DL       L+         S SP   +     S   G    +L ++ S+GS  K 
Sbjct: 290 IQLSDLSQKVI--LSKNETAFRGFSLSPSGKKAATVISGTNGLSYGKLAIVNSDGSQLKE 347

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSP 399
           I  D+  S F+  W+P    + FT  S     I  ++    +   L + D+ +   T   
Sbjct: 348 IDFDRVPSGFN--WTPDEKFLYFTAQSNGGSPIFRLELSSGKVTRLTDYDTGIAQLTLLD 405

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           SG  +    +   D  ++LY    + + +T ++
Sbjct: 406 SGEWVY--ARTGADNPNELYIASADLKTKTRVS 436



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 55/340 (16%), Positives = 119/340 (35%), Gaps = 67/340 (19%)

Query: 165 SITGEKGD--FNSRILFVSESVVSGIIK-------NSLCVMDRDGANIRYLTPSRDQILF 215
            I    G     +++++   S+V    K       N L ++  D  +   LT  ++ +  
Sbjct: 29  KIQQVSGITAAKNKVVYTVNSIVKNEDKPLEYDYINKLYLLSEDRKSSIALTQGKEGV-G 87

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA--- 272
           +   SP+ + +A+     +D  +++++       P ++ + +    +P+FS +GKR    
Sbjct: 88  QAEISPDGKMIAFVR-RVKDKSQIFILPL-SGGEPWQLTHSKYGASSPKFSPDGKRILYS 145

Query: 273 ---------------------LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS- 310
                                  S++K        + L+ +  +   +     I A  + 
Sbjct: 146 GGIRLEELVNDSLLNPQKGLPAFSLEKPGFEKDSYL-LKGSKVKPNPDGNLEEIRAYLNK 204

Query: 311 --PDSSQIVFE-------SDREGK---EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              D    VF        ++  G      L+ ++   + Q R      ASY    ++P G
Sbjct: 205 STEDKKTRVFTRLNFQGEANLNGDISFSHLFEIEVKENAQARALTSGFASYNGANYAPDG 264

Query: 359 DLIAFTK---------FSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLI-FS 407
             I  +             E   + +   D SQ+ +L ++ +  +  + SPSG+      
Sbjct: 265 RSIFVSTAKDADEHPDRESENKIVQIQLSDLSQKVILSKNETAFRGFSLSPSGKKAATVI 324

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ---WVG 444
              +G +  KL  ++ +G     I+   +   P    W  
Sbjct: 325 SGTNGLSYGKLAIVNSDGSQLKEID---FDRVPSGFNWTP 361



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 59/177 (33%), Gaps = 3/177 (1%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + +    +        SP+ +K A        +    L     D +  +  +F  +   
Sbjct: 297 QKVILSKNETAFRGFSLSPSGKKAATVISGTNGLSYGKLAIVNSDGSQLKEIDFDRVPSG 356

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             ++ + K    + Q +    I+ ++L S    RLT+        +       +   +  
Sbjct: 357 FNWTPDEKFLYFTAQSNGGSPIFRLELSSGKVTRLTDYDTGIAQLTLLDSGEWVYARTGA 416

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKK 378
           +   +LY+  ++   + R+S   +    + + S P      +    G+     VMK 
Sbjct: 417 DNPNELYIASADLKTKTRVSDLNDHWLKNKILSVPVKQ--IYKNSKGQDIEFWVMKP 471


>gi|153869314|ref|ZP_01998955.1| WD-40 repeat protein [Beggiatoa sp. PS]
 gi|152074160|gb|EDN71045.1| WD-40 repeat protein [Beggiatoa sp. PS]
          Length = 1207

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 23/228 (10%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             F+P+   +A A+YD        L   +  +  + +      I A  FS +GK    +  
Sbjct: 956  AFNPDGTLLASASYDH----NAKLWQVQEGQLLQTLNGHTDKIHAVAFSPDGKMLA-TAS 1010

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  + + ++D Q     +       +++A +++ D +Q++      G + + +   N  
Sbjct: 1011 FDGQVGLLTIDTQQKRFYQ--AHDGKDVNAIAFNADGTQLLTT----GDDDVRLWALNHK 1064

Query: 337  DQKRISQDKEAS--YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNL 392
              + +++   A+        S     I      G    + V        +   E   S +
Sbjct: 1065 PPQLLNKYTPANKSLIWSALSLDNQWI---SSVGSDQIVYVYSAIDKTIQYRFEGHESTI 1121

Query: 393  QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                +SP G+ +  +     D   +L+ +  NG     +  P ++  P
Sbjct: 1122 YRVIFSPDGQQIATAS---ADATLRLWDL-YNGNQLLSLRLPTHSGKP 1165



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 74/229 (32%), Gaps = 30/229 (13%)

Query: 199 DGANIRYLTPSRDQILFEPR--------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           DG  I +  P+   I              SP+ + +A A  D++    + L +   D+  
Sbjct: 680 DGHIIFWSLPTGKIIKRWKAPDKVKALALSPDGKYLASAGTDNK----ITLWNLETDQPQ 735

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +     +  I    FSS+G+    S   D    ++ V         L          ++S
Sbjct: 736 QIFSGHKDQISGLAFSSDGELLA-SASYDGTARLWQV-KTGKVLHTLKAHTDHVQKVAFS 793

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D+  +   S ++   +L+    N    +R+ +  +   FD  +   G  +         
Sbjct: 794 HDNQWLA-TSSKDATIRLW--NVNSGKTERVLRGHKQIIFDIRFIDHGQTLVSASDDRT- 849

Query: 371 FAIGVMKKDGSQERLLVE----------DSNLQAPTWSPSGRSLIFSRK 409
             + +        + + +            + +  + S  G  ++++  
Sbjct: 850 --LRLWDIQSGVTKRVFQGHTAGVTGIATFDNKIFSASDDGTVILWNST 896



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 79/270 (29%), Gaps = 52/270 (19%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K +L  ++ D    + +       +    FS + + +A A+YD        L   +  + 
Sbjct: 723 KITLWNLETDQ--PQQIFSGHKDQISGLAFSSDGELLASASYDG----TARLWQVKTGKV 776

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              +      +    FS + +    +  KD  + +++V+        L     I     +
Sbjct: 777 LHTLKAHTDHVQKVAFSHDNQWLA-TSSKDATIRLWNVN-SGKTERVLRGHKQIIFDIRF 834

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--------WSPQGDLI 361
                 +V  SD      L +        KR+ Q   A               S  G +I
Sbjct: 835 IDHGQTLVSASD---DRTLRLWDIQSGVTKRVFQGHTAGVTGIATFDNKIFSASDDGTVI 891

Query: 362 AFTK------------------FSGEKFAIGVMKKDGSQ------------ERLLVEDSN 391
            +                     +     I V   +GS             E+     + 
Sbjct: 892 LWNSTLPYQQSIDFAITPISVAIAPTGNHIAVGFAEGSLRLYALPELNLLWEQQTAHTAE 951

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           ++   ++P G  L  +     D  +KL+ +
Sbjct: 952 IKRLAFNPDGTLLASASY---DHNAKLWQV 978



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 72/195 (36%), Gaps = 16/195 (8%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G  ++ L    D+I     FSP+ + +A A++D     +V L+     +      +    
Sbjct: 981  GQLLQTLNGHTDKIHAV-AFSPDGKMLATASFDG----QVGLLTIDTQQKRFYQAHDGKD 1035

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + A  F+++G + L +   D  +      L     + L      N S  +S  S    + 
Sbjct: 1036 VNAIAFNADGTQLLTTGDDDVRLWA----LNHKPPQLLNKYTPANKSLIWSALSLDNQWI 1091

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK- 378
            S     + +YV  +     +   +  E++ +  ++SP G  IA          + +    
Sbjct: 1092 SSVGSDQIVYVYSAIDKTIQYRFEGHESTIYRVIFSPDGQQIATASADAT---LRLWDLY 1148

Query: 379  DGSQ---ERLLVEDS 390
            +G+Q    RL     
Sbjct: 1149 NGNQLLSLRLPTHSG 1163


>gi|329889314|ref|ZP_08267657.1| prolyl oligopeptidase family protein [Brevundimonas diminuta ATCC
           11568]
 gi|328844615|gb|EGF94179.1| prolyl oligopeptidase family protein [Brevundimonas diminuta ATCC
           11568]
          Length = 771

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/274 (12%), Positives = 87/274 (31%), Gaps = 53/274 (19%)

Query: 206 LTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDT--RIDRAPKRI-------- 253
           +       +  P  R+SP+ + +A    + E+  R+ L+ +  +    P+ +        
Sbjct: 213 VAQGTSAPVVRPAIRWSPDSRYLATYRINREEARRLSLVQSTPKDGGPPRVLDYLYPLTG 272

Query: 254 ----GNFRSMILAPR-----------------------FSSNGKRAL--ISVQKDEAMDI 284
                + +  I                           +S++ +      +V+   A+ +
Sbjct: 273 DTETASAQGFIFEVATGRSIPMQTPARPILYYGGPYYEWSADSRAVFERFAVRGYGALQL 332

Query: 285 YSVDLQSNATERLTNTLFINI----SASYSPDSSQ--IVFESDREGKEQLYVMQSNGSDQ 338
           + ++ ++  T  LT              +S D       + +D +G   +Y + +   ++
Sbjct: 333 HRIEAETGETRLLTEDRSDTYVDFYGHHWSYDDKSDTHYWTADPDGFAHIYAVDARTGER 392

Query: 339 KRISQDKEASYFDPVWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           ++I+     +        +   +        T        +  +   G Q RLL  ++  
Sbjct: 393 RQITSGDWRARSVAGADHKAKRLLIIGSGRETGRDPYLRHLYSVPTTGGQPRLLTPEAMD 452

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              + SP GR  + +          +     +GR
Sbjct: 453 HDVSVSPDGRFFVDNMSTIDQPTLSVLRRSSDGR 486



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 81/289 (28%), Gaps = 69/289 (23%)

Query: 220 SPNQQKVAYATYDD-------EDILRVYLMDTRIDRAPKRIGNFRSMI----LAP----- 263
           SP+ +  A     D       ++  +    D         + N   M+     AP     
Sbjct: 166 SPDGRWRAVVRGGDLILISTADNAEQRLTQDGAASPYATPLINLNDMVAQGTSAPVVRPA 225

Query: 264 -RFSSNGKRAL-ISVQKDEAMDIYSV---DLQSNATERL---------TNTLF------- 302
            R+S + +      + ++EA  +  V            L         T T         
Sbjct: 226 IRWSPDSRYLATYRINREEARRLSLVQSTPKDGGPPRVLDYLYPLTGDTETASAQGFIFE 285

Query: 303 -----------------INISA--SYSPDSSQIV--FESDREGKEQLYVMQSNGSDQKRI 341
                                    +S DS  +   F     G  QL+ +++   + + +
Sbjct: 286 VATGRSIPMQTPARPILYYGGPYYEWSADSRAVFERFAVRGYGALQLHRIEAETGETRLL 345

Query: 342 SQDKEASY---FDPVWSPQ--GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           ++D+  +Y   +   WS     D   +T        I  +     + R +          
Sbjct: 346 TEDRSDTYVDFYGHHWSYDDKSDTHYWTADPDGFAHIYAVDARTGERRQITSGDWRARSV 405

Query: 397 WSPSGRS----LIFSRKKDGDTGS--KLYSIDLNGRNETLINTPAYASD 439
                ++    +I S ++ G       LYS+   G    L+   A   D
Sbjct: 406 AGADHKAKRLLIIGSGRETGRDPYLRHLYSVPTTGGQPRLLTPEAMDHD 454


>gi|152967775|ref|YP_001363559.1| peptidase S9 prolyl oligopeptidase [Kineococcus radiotolerans
           SRS30216]
 gi|151362292|gb|ABS05295.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kineococcus radiotolerans SRS30216]
          Length = 643

 Score = 68.1 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 90/274 (32%), Gaps = 24/274 (8%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
                 G   R LTP+      +P  + +   +      +    R  +        P+ +
Sbjct: 101 WFHAAAGRPPRPLTPADGVRYADPDQAGDGIVLVAEDVREGVPRRSLVHVPLDGSGPREL 160

Query: 254 GNFRSMILAPRFSSNGKRALISV-------QKDEAMDIYSVDLQSNATERLTNTLFIN-- 304
                 + APR S +G R + +         +   +    +D+ +     +      +  
Sbjct: 161 FEGPRFLAAPRVSPDGSRLVWTSWEHPDMPWQSTLLWEARLDVAAGQLSDVRVLAGRDRR 220

Query: 305 ---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-----YFDPVWSP 356
              +   ++PD + +V  SDR G   L+ +  +G  +  +++  +       +    W+ 
Sbjct: 221 ESLVHPGFAPDGTVLV-VSDRSGWWNLHEVGPDGGLRPLLAEAADQGFPPWVFATTSWAA 279

Query: 357 -QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
              D +A    +   + + V+ + G +   L       AP  +  G  ++          
Sbjct: 280 LDADRVALVHAADVGYRLDVVHRAGGRVEALDLPFTAYAPVLAGGGGRVVAVAASPTAPA 339

Query: 416 SKLYSIDLNGRNET-----LINTPAYASDPQWVG 444
           + +     +  + T     ++   A A DP  + 
Sbjct: 340 AVVVVDPADPADPTAPAVDVVRVSAAAPDPAHLP 373


>gi|297202573|ref|ZP_06919970.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|297148141|gb|EDY53932.2| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 683

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 82/246 (33%), Gaps = 26/246 (10%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDI-----LRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           D    +   S + + VA+ +             + + D       K          +P  
Sbjct: 47  DGPSGDAAISADGRTVAFVSRAPSFGCAQFAPCLLVKDVSGGGLTKIGLGSGYTYGSPAP 106

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFE- 319
           S++G R   S      +  Y  D  +  TE+L       +  +  + S SPD + + +  
Sbjct: 107 SADGSRIAFSA-GTRFLAPYLYDRATGRTEKLWPQDPPGSAELGRAESISPDGTHVAYTV 165

Query: 320 SDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAI 373
            +R G E    LYV  +     + +S  +E        S  G+ +A+   +        +
Sbjct: 166 GNRNGPENTRFLYVRDTATGTDELVSPAEEGQKAGASVSGDGNRVAYAVRADSDEDPVDV 225

Query: 374 GVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431
            V  +   +   +            +  GR ++       D  S LY  DL  G ++ + 
Sbjct: 226 YVKDRTTGERTQVDTGLGVAYLVRITADGRRVLL------DAESGLYVHDLRTGESKRVA 279

Query: 432 NTPAYA 437
           +   +A
Sbjct: 280 DGNPHA 285



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 75/236 (31%), Gaps = 19/236 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA--P 250
           L V D  G  +  +          P  S +  ++A++         +Y   T       P
Sbjct: 80  LLVKDVSGGGLTKIGLGSGYTYGSPAPSADGSRIAFSAGTRFLAPYLYDRATGRTEKLWP 139

Query: 251 KRIGNFRSMILAPRFSSNGKRALISV-QKDE---AMDIYSVDLQSNATERLT-NTLFINI 305
           +       +  A   S +G     +V  ++       +Y  D  +   E ++        
Sbjct: 140 QDPPGSAELGRAESISPDGTHVAYTVGNRNGPENTRFLYVRDTATGTDELVSPAEEGQKA 199

Query: 306 SASYSPDSSQIVFE--SDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            AS S D +++ +   +D +     +YV      ++ ++      +Y     +  G  + 
Sbjct: 200 GASVSGDGNRVAYAVRADSDEDPVDVYVKDRTTGERTQVDTGLGVAYLV-RITADGRRVL 258

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
               SG    + V      + + + + +   A   +  GR       +DG     L
Sbjct: 259 LDAESG----LYVHDLRTGESKRVADGNPHAA---TADGRY-AVVSGEDGTRVRDL 306



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 61/199 (30%), Gaps = 27/199 (13%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATER 296
           V++           +G   S   AP +S  G+          D    I+  +        
Sbjct: 406 VFVNAPGGVSQVNSVGQKPSSEGAPCYS--GRMVGYVGPYAPDGGPGIHVRNRSVGKLTS 463

Query: 297 LTNTLF----INISASYSPDSSQIVFES-------DREGKEQLYVMQSNGSDQKRISQDK 345
           L +               P    + + +       D + + ++Y  + NG D   +S   
Sbjct: 464 LGSYQGVRFTWMGQPVVDPTCQWLTYAATLPAGDTDPDPQPRVYRFKFNGGDTDVVSAST 523

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +  +P  +  G  IAF     +  ++ V   D      +   +   +      GR + 
Sbjct: 524 GGAAGNPSINYGGRYIAF----EQGGSVYVRDLDTGSLERVAAQAAAPSLA--ADGRKVA 577

Query: 406 FSRKKDGDTGSKLYSIDLN 424
           + R +D       Y  DL+
Sbjct: 578 YQRGRDS------YVRDLD 590



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 70/193 (36%), Gaps = 16/193 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY--D 232
           + + +   +         L V D        ++P+ +        S +  +VAYA     
Sbjct: 159 THVAYTVGNRNGPENTRFLYVRDTATGTDELVSPAEEGQKAGASVSGDGNRVAYAVRADS 218

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           DED + VY+ D R      ++     +    R +++G+R L+    D    +Y  DL++ 
Sbjct: 219 DEDPVDVYVKD-RTTGERTQVDTGLGVAYLVRITADGRRVLL----DAESGLYVHDLRTG 273

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            ++R+ +      +A    D    V      G++   V        +  +    A     
Sbjct: 274 ESKRVADGNPHAATA----DGRYAV----VSGEDGTRVRDLRTG-LRGAALPGPAQPGPD 324

Query: 353 VWSPQGDLIAFTK 365
           + + +G  + F+ 
Sbjct: 325 MLAAKGRSVVFSS 337



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 81/283 (28%), Gaps = 37/283 (13%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             VV+   +  + V    G +       +      P +S   + V Y      D      
Sbjct: 395 NKVVTFTSEGDVFVNAPGGVSQVNSVGQKPSSEGAPCYS--GRMVGYVGPYAPDGGPGIH 452

Query: 242 MDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISV-------QKDEAMDIYSVDLQ 290
           +  R       +G+++ +       P      +    +          D    +Y     
Sbjct: 453 VRNRSVGKLTSLGSYQGVRFTWMGQPVVDPTCQWLTYAATLPAGDTDPDPQPRVYRFKFN 512

Query: 291 SNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
              T+ ++ +T     + S +     I F    E    +YV   +    +R++    A  
Sbjct: 513 GGDTDVVSASTGGAAGNPSINYGGRYIAF----EQGGSVYVRDLDTGSLERVAAQAAAPS 568

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   G  +A+ +         V   D               P+ S  G  + ++  
Sbjct: 569 LAA----DGRKVAYQRGRDS----YVRDLDTGTT----TRVGGTQPSLSGDGTRVAYTTG 616

Query: 410 KD------GDTGSKLYSID-LNGRNETLINTPAYASDPQWVGF 445
           +            +L S+D   GRN+     P+  +D   V F
Sbjct: 617 RSVHLLELATGKRQLVSVDRWGGRNDLPAGHPSVNADGTVVAF 659



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 69/202 (34%), Gaps = 27/202 (13%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + +    +         +  +     +G +   ++ S       P  +   + +A+    
Sbjct: 486 WLTYAATLPAGDTDPDPQPRVYRFKFNGGDTDVVSASTGGAAGNPSINYGGRYIAF---- 541

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            E    VY+ D       +      +  LA    ++G++      +D     Y  DL + 
Sbjct: 542 -EQGGSVYVRDLDTGSLERVAAQAAAPSLA----ADGRKVAYQRGRD----SYVRDLDTG 592

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD- 351
            T     T       S S D +++ + + R     +++++     ++ +S D+     D 
Sbjct: 593 TT-----TRVGGTQPSLSGDGTRVAYTTGRS----VHLLELATGKRQLVSVDRWGGRNDL 643

Query: 352 ----PVWSPQGDLIAFTKFSGE 369
               P  +  G ++AF   S +
Sbjct: 644 PAGHPSVNADGTVVAFESASPD 665


>gi|219851095|ref|YP_002465527.1| hypothetical protein Mpal_0430 [Methanosphaerula palustris E1-9c]
 gi|219545354|gb|ACL15804.1| conserved hypothetical protein [Methanosphaerula palustris E1-9c]
          Length = 403

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 78/252 (30%), Gaps = 25/252 (9%)

Query: 151 WRKIAHTISDDIY--------QSITGEKGDFNSRI---LFVSESVVSGIIKNSLCVMDRD 199
           W    H ++ +IY        +      GD N ++   +  +  V    +     +   D
Sbjct: 97  WEDYRHGVNPEIYLYDLTTHIERQISWSGDENYQMEPAVDGTNIVYEDSMNGFYNIYLYD 156

Query: 200 G-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
                R+      +  + P  S     V +  Y       +YL        P  + +  +
Sbjct: 157 LLTQHRHSLNEDSKTQWHPAIS--GDDVVWIDYTTS---ILYLYSISAGGQPIAVTDGYT 211

Query: 259 MILAPRFSSNGKRALISVQKDEAMD-IYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              AP    +  R + +   +     I+  D  +   + LT       +   S   + ++
Sbjct: 212 APKAPAV--DAGRVVWADYVNGNDAGIFLYDRATGIKKWLTPNPSNQDNPVIS--GNTVI 267

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +  D+ G   LY          R++      Y     S  GD + +    G    I +  
Sbjct: 268 WVDDQAGTSNLYRYDLTTHQTTRLTSGPSNQY---SVSIDGDRVVYVDDRGMNPHIYMTP 324

Query: 378 KDGSQERLLVED 389
            + + + ++V  
Sbjct: 325 IESTPQPVMVNG 336



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 71/197 (36%), Gaps = 13/197 (6%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            ++         RIG   S    P  S  G R +    ++   DIY  ++ +    R+T 
Sbjct: 23  VVISPMAGAVEVRIGTSDSDQGHPSIS--GDRIVWQDDRNGNWDIYLWNITTQTETRITT 80

Query: 300 TLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQ 357
                 + S S   + IV+E  R G   ++Y+       +++IS   + +Y  +P     
Sbjct: 81  DSSDQKNPSIS--GNLIVWEDYRHGVNPEIYLYDLTTHIERQISWSGDENYQMEPAV--D 136

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGS 416
           G  I +       + I +          L EDS     P  S  G  +++       +  
Sbjct: 137 GTNIVYEDSMNGFYNIYLYDLLTQHRHSLNEDSKTQWHPAIS--GDDVVWIDYT--TSIL 192

Query: 417 KLYSIDLNGRNETLINT 433
            LYSI   G+   + + 
Sbjct: 193 YLYSISAGGQPIAVTDG 209



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +    G+ + RI    ++    P  S  GD I +       + I +       E  + 
Sbjct: 23  VVISPMAGAVEVRI-GTSDSDQGHPSIS--GDRIVWQDDRNGNWDIYLWNITTQTETRIT 79

Query: 388 EDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            DS+ Q  P+ S  G  +++   + G    ++Y  DL    E  I+    
Sbjct: 80  TDSSDQKNPSIS--GNLIVWEDYRHG-VNPEIYLYDLTTHIERQISWSGD 126


>gi|171910088|ref|ZP_02925558.1| hypothetical protein VspiD_02920 [Verrucomicrobium spinosum DSM
           4136]
          Length = 1207

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 57/368 (15%), Positives = 116/368 (31%), Gaps = 42/368 (11%)

Query: 84  QDSFKQKITNP-DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV-----EFRLWDVKDRK 137
             +   K  +   ++P+     ++   VL    +      +L V       RL D    +
Sbjct: 111 PPAAPGKPADALATLPKISPRTAIKKSVL---SLSVSAPAKLVVAGGYGSVRLIDPNSLQ 167

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
            +            R++   ++  +        G F    +F +                
Sbjct: 168 TV------------REMK-EVAGKVNAVAFSADGAF----VFAAAGTPGVSGVAYQWKTT 210

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG+ +R L    D +      SP+ + +A  +YD +    + L D       + +    
Sbjct: 211 -DGSLVRKLEGHSDALYGM-AISPDGKLLATGSYDQK----IKLWDLSTGAEVRALTGHN 264

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           S +    F  +GK    S   D  + ++ V       +  +  L    + ++SPD   + 
Sbjct: 265 SGVFGLAFRPDGKVLA-SASADRTVKLWEV-ATGRRLDTFSQPLKEQTAVAFSPDGRLLA 322

Query: 318 FESDREGKEQLYVMQS---NGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                + + +++ + +    G++Q   +    E +     + P G  I FT  +     I
Sbjct: 323 -AGGADNRLRVWKVSAEAVEGTNQLLATRYAHEGAILSVGFEPGGKQI-FTSAADRTAKI 380

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                    E  L++  +   P  +  G   +   + DG     L S  L          
Sbjct: 381 W--NSATYIEEHLMDQQSDWVPAMAALGGDKLLEGRLDGSLAVYLISTGLPATPAPATPK 438

Query: 434 PAYASDPQ 441
           P   S P 
Sbjct: 439 PMAKSKPA 446



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 77/237 (32%), Gaps = 25/237 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS +   V  A          Y   T      +++      +     S +GK    +  
Sbjct: 183 AFSADGAFVFAAAGTPGVSGVAYQWKTTDGSLVRKLEGHSDALYGMAISPDGKLLA-TGS 241

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNG 335
            D+ + ++  DL + A  R LT         ++ PD   +   S DR     + + +   
Sbjct: 242 YDQKIKLW--DLSTGAEVRALTGHNSGVFGLAFRPDGKVLASASADRT----VKLWEVAT 295

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVEDSNLQ 393
             +               +SP G L+A    +  +  +  +  +      +LL      +
Sbjct: 296 GRRLDTFSQPLKEQTAVAFSPDGRLLA-AGGADNRLRVWKVSAEAVEGTNQLLATRYAHE 354

Query: 394 APTWS----PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
               S    P G+ + F+     D  +K+++       E L++  +      WV  M
Sbjct: 355 GAILSVGFEPGGKQI-FTS--AADRTAKIWN-SATYIEEHLMDQQSD-----WVPAM 402


>gi|332661781|ref|YP_004451251.1| (myosin heavy-chain) kinase [Haliscomenobacter hydrossis DSM 1100]
 gi|332337278|gb|AEE54378.1| (Myosin heavy-chain) kinase [Haliscomenobacter hydrossis DSM 1100]
          Length = 1478

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 70/202 (34%), Gaps = 12/202 (5%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                  D  +    +SPN+QK+   + D      V           + +      + +  
Sbjct: 1199 QTLHGHDGGVSSVSYSPNEQKILSGSDDH----TVKEWSVASGECLQTLQGHTYGVESVS 1254

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +S++GK+ L S   D+ +  + V       + L    +   S SYS D  +I+  SD   
Sbjct: 1255 YSADGKKIL-SGSSDKTVKEWLV-ASGECLQTLRGHTYRVESVSYSADGKKILSGSD--- 1309

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
               +        +  +     +       +SP G  I    +        V    G   +
Sbjct: 1310 DHTVKEWSVASGECLQTLNGHDRQVRSMSYSPDGKKILSGSYDKRVKEWLV--SSGECLQ 1367

Query: 385  LLV-EDSNLQAPTWSPSGRSLI 405
             L   DS +++ ++S  G+ ++
Sbjct: 1368 TLQGHDSGIESVSYSTDGKKIL 1389



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 111/318 (34%), Gaps = 27/318 (8%)

Query: 109  QVLVTGRVI-KEGKDRL--RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
              L+ GR++  +G +R    V +        K+I+      +   W      +S +  Q+
Sbjct: 813  NALLKGRLLFSQGHNRRASSVSYS----PHGKKILSGSHDGTVKEW----LVLSGECLQT 864

Query: 166  ITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            + G + D+ + + +  +   ++SG    ++                    ++   +SP+ 
Sbjct: 865  LQGHE-DWVNSVSYSPDGKKILSGSNDGTVKEWLMASGECLQTLHGHGYGVWSVSYSPDG 923

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            +K+   ++D      V           + +      +++  +S++GK+ L S   D  + 
Sbjct: 924  KKILSGSHD----CTVKEWLVASGECLQTLQGHSDPVMSVSYSADGKKIL-SGSVDCTVK 978

Query: 284  IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
             + V +     + L     +  S SYS D  +I+  S     + +        +  +  +
Sbjct: 979  EWLV-VSGECLQTLRGHDNVVSSVSYSADGKKILSGSS---DKTVKEWLVASGECLQTLR 1034

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGR 402
              ++      +S  G  I             V    G   + L      +++ ++S  G+
Sbjct: 1035 GHDSGIESVSYSADGKKILSGSSDHTVKEWLV--ASGECLQTLRGHTYRVESVSYSADGK 1092

Query: 403  SLIFSRKKDGDTGSKLYS 420
             ++ S   DG     L  
Sbjct: 1093 KIL-SGSADGTVKEWLVV 1109



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 94/303 (31%), Gaps = 28/303 (9%)

Query: 111  LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
            L  GR    G D   ++ +     +   +  +++      +R +   + + + +      
Sbjct: 771  LADGRQTLAGADLRDLDLQKV-RFNGIPLSAQQY------YRYLPARLENALLKGRLLFS 823

Query: 171  GDFNSRILFVSESVV-----SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
               N R   VS S       SG    ++                 +  +    +SP+ +K
Sbjct: 824  QGHNRRASSVSYSPHGKKILSGSHDGTVKEWLVLSGECLQTLQGHEDWVNSVSYSPDGKK 883

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +   + D      V           + +      + +  +S +GK+ L S   D  +  +
Sbjct: 884  ILSGSNDG----TVKEWLMASGECLQTLHGHGYGVWSVSYSPDGKKIL-SGSHDCTVKEW 938

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRISQ 343
             V       + L       +S SYS D  +I+      G     V        +  +  +
Sbjct: 939  LV-ASGECLQTLQGHSDPVMSVSYSADGKKIL-----SGSVDCTVKEWLVVSGECLQTLR 992

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGR 402
              +       +S  G  I             V    G   + L   DS +++ ++S  G+
Sbjct: 993  GHDNVVSSVSYSADGKKILSGSSDKTVKEWLV--ASGECLQTLRGHDSGIESVSYSADGK 1050

Query: 403  SLI 405
             ++
Sbjct: 1051 KIL 1053



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/239 (12%), Positives = 73/239 (30%), Gaps = 12/239 (5%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             + G  +       + ++SG   +++                    +    +S + +K+ 
Sbjct: 1036 HDSGIESVSYSADGKKILSGSSDHTVKEWLVASGECLQTLRGHTYRVESVSYSADGKKIL 1095

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D      V           + +  +   + +  +S +G++ L+    D  +  + V
Sbjct: 1096 SGSADG----TVKEWLVVSGECLQTLQGYDDGVSSVSYSPDGQKILL-GSADGTVKEWLV 1150

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                   + L     +  S SYS D  +I+  SD      +        +  +     + 
Sbjct: 1151 -ASGECLQTLRGHDNVVSSVSYSADGKKILSGSD---DRTVKEWLVLSGECLQTLHGHDG 1206

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
                  +SP    I             V    G   + L      +++ ++S  G+ ++
Sbjct: 1207 GVSSVSYSPNEQKILSGSDDHTVKEWSV--ASGECLQTLQGHTYGVESVSYSADGKKIL 1263



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 68/217 (31%), Gaps = 13/217 (5%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                  D ++    +S + +K+        D   V           + +      + +  
Sbjct: 1157 QTLRGHDNVVSSVSYSADGKKI----LSGSDDRTVKEWLVLSGECLQTLHGHDGGVSSVS 1212

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +S N ++ L S   D  +  +SV       + L    +   S SYS D  +I+  S    
Sbjct: 1213 YSPNEQKIL-SGSDDHTVKEWSV-ASGECLQTLQGHTYGVESVSYSADGKKILSGSS--- 1267

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             + +        +  +  +          +S  G  I             V    G   +
Sbjct: 1268 DKTVKEWLVASGECLQTLRGHTYRVESVSYSADGKKILSGSDDHTVKEWSV--ASGECLQ 1325

Query: 385  LLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             L   D  +++ ++SP G+ ++ S   D      L S
Sbjct: 1326 TLNGHDRQVRSMSYSPDGKKIL-SGSYDKRVKEWLVS 1361



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 46/140 (32%), Gaps = 9/140 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++                    +    +S + +K+   + D      V      
Sbjct: 1264 SGSSDKTVKEWLVASGECLQTLRGHTYRVESVSYSADGKKILSGSDDH----TVKEWSVA 1319

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFIN 304
                 + +      + +  +S +GK+ L S   D+ +  + V       + L  +   I 
Sbjct: 1320 SGECLQTLNGHDRQVRSMSYSPDGKKIL-SGSYDKRVKEWLVS-SGECLQTLQGHDSGIE 1377

Query: 305  ISASYSPDSSQIVFES-DRE 323
             S SYS D  +I+  S DR 
Sbjct: 1378 -SVSYSTDGKKILSVSHDRT 1396


>gi|294142742|ref|YP_003558720.1| prolyl oligopeptidase family protein [Shewanella violacea DSS12]
 gi|293329211|dbj|BAJ03942.1| prolyl oligopeptidase family protein [Shewanella violacea DSS12]
          Length = 687

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 16/118 (13%)

Query: 261 LAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            + + S +GKRAL    + +        D+++V+ ++  T RLT T     S  +SPD +
Sbjct: 45  SSVQLSPDGKRALWLESRWDKELDKSQKDLWTVNTKTRQTTRLTFTNESESSPQWSPDGT 104

Query: 315 QIVFESDRE---------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            I + S            GK Q++ M  +G +   ++++ E      V S  G+ + F
Sbjct: 105 YIYYLSKLTHEDKKAPFNGKSQIFRMSKDGGEAVPMTKEVEGVSAFSVGS-DGNSLYF 161



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 87/235 (37%), Gaps = 28/235 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-ISV 276
           R S ++ + A+       + ++ L   + D     + +   ++     +S+G +   I+ 
Sbjct: 177 RASHDKPEYAHGERKTNPLYKLDLQHFKQD----ILLDDDKVVWQFSVNSDGSKIARITT 232

Query: 277 QKD------EAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQIVFESD 321
             +         DI   D +S   + L +T +   + S         +  D+ Q+ F  D
Sbjct: 233 SDNELVNLEGWSDIEIYDTRSKTNKVLEDTAWREQAPSPYGWLLGLDWHSDNQQLAFRID 292

Query: 322 REGKE-QLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +G   +L+V  +       I++  +   S  +  W P  D I +      +  +   + 
Sbjct: 293 FDGHPGKLFVSNTAKDSLLEITRPDDVTLSAANIHWRPNSDEICYRGADHARVKLFCTEV 352

Query: 379 D----GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           D    G    ++  D  + + ++S +G+ L FS     D    L+  D + +   
Sbjct: 353 DDGEQGDTRTVIKGDLVIGSYSFSHNGKKLAFSHN-GLDHFYDLFIADADSKRAK 406



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 75/272 (27%), Gaps = 54/272 (19%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ ++  +     +  L     D        R   R+        +P++S +G      
Sbjct: 50  SPDGKRALWLESRWDKELDKSQKDLWTVNTKTRQTTRLTFTNESESSPQWSPDGTYIYYL 109

Query: 276 VQK---------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGK 325
            +          +    I+ +         +T  +    + S   D + + F  S     
Sbjct: 110 SKLTHEDKKAPFNGKSQIFRMSKDGGEAVPMTKEVEGVSAFSVGSDGNSLYFLTSKTVKD 169

Query: 326 EQLYVMQSNGSDQKR----------------------ISQDKEASYFDPVWSPQGDLIAF 363
           + L+       D+                        I  D +   +    +  G  IA 
Sbjct: 170 KDLWAGMRASHDKPEYAHGERKTNPLYKLDLQHFKQDILLDDDKVVWQFSVNSDGSKIAR 229

Query: 364 TKFSGEKF-------AIGVMKKDGSQERLLVEDSNLQ-APT---------WSPSGRSLIF 406
              S  +         I +        ++L + +  + AP+         W    + L F
Sbjct: 230 ITTSDNELVNLEGWSDIEIYDTRSKTNKVLEDTAWREQAPSPYGWLLGLDWHSDNQQLAF 289

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
               DG  G KL+  +    +   I  P   +
Sbjct: 290 RIDFDGHPG-KLFVSNTAKDSLLEITRPDDVT 320



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 36/119 (30%), Gaps = 17/119 (14%)

Query: 331 MQSNGSDQKRISQDKE---ASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGS 381
                +   +I+ D     A       SP G    + +          +  +  +     
Sbjct: 23  YSMASAPSHQITTDDFFDIAGMSSVQLSPDGKRALWLESRWDKELDKSQKDLWTVNTKTR 82

Query: 382 QERLLVEDSNLQA-PTWSPSGRSLIFSR-------KKDGDTGSKLYSIDLNGRNETLIN 432
           Q   L   +  ++ P WSP G  + +         K   +  S+++ +  +G     + 
Sbjct: 83  QTTRLTFTNESESSPQWSPDGTYIYYLSKLTHEDKKAPFNGKSQIFRMSKDGGEAVPMT 141


>gi|168703379|ref|ZP_02735656.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 1294

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 68/200 (34%), Gaps = 13/200 (6%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPRFSSNGKRALI-S 275
             FSP+  ++A        +  +   +       P+  G   +  +AP +S +GK   + S
Sbjct: 1069 AFSPDGTRLAATDGYVTRVRSLAGKELWSFQSHPRPKGESVARRIAPAWSPDGKWLAVPS 1128

Query: 276  VQKDEAMDIYSVDLQS-NATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              +D      S+  +   A  R LT         +++PD S  V   D +G    +  ++
Sbjct: 1129 KGQDSGAWGVSLSPKGEGAPTRVLTGPKAPVTCVAWAPDGSFFV-AGDEDGTVIAWDAKT 1187

Query: 334  NGSDQKRISQDKE---ASYFDPVWSP-QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +    +R    ++           SP  G + A            V+         +   
Sbjct: 1188 DKEIWRRTFHGRDMPAGRVHALAVSPADGTVAAAVDMLSGMCPQRVVLLAPRDGEAVASG 1247

Query: 390  SNLQAP----TWSPSGRSLI 405
                AP     W+P GRS +
Sbjct: 1248 LWRMAPVTSVAWAPDGRSFV 1267



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/317 (14%), Positives = 95/317 (29%), Gaps = 59/317 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           EFR  D    K    KK     A +R      + D       +  +F+  +  +      
Sbjct: 368 EFRTLDAGTGKVQATKKRDKPEAIYRGTTAAFTAD-----GSKWVEFDGNVHHLRGDFKG 422

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-----DDEDILRVYL 241
           G    +       G  +      +        FSP+  + A   +     D   +L V+ 
Sbjct: 423 GAPALA-------GQRVSTRDEYKRIFGRGGAFSPDGTRFAGIHWKHAPEDANGVLSVWD 475

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             T +      + N  +   +  +S +G    +         +   D ++    R  +  
Sbjct: 476 AVTGVRTGALALPNSEAPAFSFAWSPDGTELAV-----GRYSVEVYDAKTLKLSRRFDAG 530

Query: 302 FINISAS-----YSPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           +  ++       +SPD  ++        S         V+  + ++ + +     A    
Sbjct: 531 WEEMTGRFSALAWSPDGKRLAAGRRVERSTSPPGRTGGVITGDTANVQLLDARTGAELQW 590

Query: 352 P------------VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPT-- 396
                         +SP G  I           IG     G++  R+L    N++ P+  
Sbjct: 591 FDGFPDNLPVMSLAFSPDGKRIV-CGAGNFPDVIGFDPPAGAKTLRVL----NVEEPSVR 645

Query: 397 ------WSPSG-RSLIF 406
                 + P G R ++F
Sbjct: 646 GMRGVAFGPDGSRYIVF 662



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 83/265 (31%), Gaps = 47/265 (17%)

Query: 209  SRDQILFEPRFSPNQQKV---AYATYDDEDILRVYLMDT------RIDRAPKRIGNFRSM 259
             RD       F+PN  ++     A       +++Y +        +       + + +  
Sbjct: 920  GRDCAALHLAFAPNGNQLLAGFSAAVGPGGAVKLYDVTPPAPAVAQDWAEVATLTDLKGN 979

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA----TERLTNTLFINISASYSPDSSQ 315
            +     S +GK    +   D    I   D ++        R T   +     ++S D+  
Sbjct: 980  VNGVAVSPDGKLLAAT---DHMGMIAVWDAKTRKVLATVNRATKGAY---GVAFSRDNKH 1033

Query: 316  IVFESDREGKEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +   SD      +   +  G+     S++  K     +  +SP G  +A T    + +  
Sbjct: 1034 LAVGSDTG----VLGYELPGTKLAAWSENNVKFGRVSEVAFSPDGTRLAAT----DGYVT 1085

Query: 374  GVMKKDGSQERLLVEDSNLQ--------APTWSPSGRSLIFSR--KKDGDTGSKLYSIDL 423
             V    G +          +        AP WSP G+ L      +  G  G  L S   
Sbjct: 1086 RVRSLAGKELWSFQSHPRPKGESVARRIAPAWSPDGKWLAVPSKGQDSGAWGVSL-SPKG 1144

Query: 424  NGRNETLINTP-------AYASDPQ 441
             G    ++  P       A+A D  
Sbjct: 1145 EGAPTRVLTGPKAPVTCVAWAPDGS 1169



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 84/293 (28%), Gaps = 45/293 (15%)

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-----DDEDILRVYLMD 243
             +  +        N  +   S  ++     +SP+  ++A  +      D     RV    
Sbjct: 841  TRVEIWATGNGAKNPVHRFASSWRVDSL-AYSPDGTRIAVGSRKEVGGDGGKANRVRETV 899

Query: 244  TRI---------DRAPKRIGNFRSMILAPRFSSNGKRAL--ISVQKDEAMDIYSVDL--- 289
             ++          R  +R        L   F+ NG + L   S        +   D+   
Sbjct: 900  IQVFNATTGKEQHRFAERAVGRDCAALHLAFAPNGNQLLAGFSAAVGPGGAVKLYDVTPP 959

Query: 290  ------QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                         LT+        + SPD   +      +    + V  +          
Sbjct: 960  APAVAQDWAEVATLTDLKGNVNGVAVSPDGKLLAAT---DHMGMIAVWDAKTRKVLATVN 1016

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAPTWSP 399
                  +   +S     +A    +G    +   +  G++     E+      +    +SP
Sbjct: 1017 RATKGAYGVAFSRDNKHLAVGSDTG----VLGYELPGTKLAAWSENNVKFGRVSEVAFSP 1072

Query: 400  SGRSLI----FSRKKDGDTGSKLYSIDLN----GRNETLINTPAYASDPQWVG 444
             G  L     +  +     G +L+S   +    G +      PA++ D +W+ 
Sbjct: 1073 DGTRLAATDGYVTRVRSLAGKELWSFQSHPRPKGESVARRIAPAWSPDGKWLA 1125



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/159 (12%), Positives = 49/159 (30%), Gaps = 19/159 (11%)

Query: 217  PRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +SP+ + +A  +         V L         + +   ++ +    ++ +G      
Sbjct: 1115 PAWSPDGKWLAVPSKGQDSGAWGVSLSPKGEGAPTRVLTGPKAPVTCVAWAPDGS---FF 1171

Query: 276  VQKDEAMDIYSVDLQS-NATERLTNTL---------FINISASYSPDSSQIVFESDREG- 324
            V  DE   + + D ++     R T             + +S +   D +         G 
Sbjct: 1172 VAGDEDGTVIAWDAKTDKEIWRRTFHGRDMPAGRVHALAVSPA---DGTVAAAVDMLSGM 1228

Query: 325  -KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              +++ ++     +       + A      W+P G    
Sbjct: 1229 CPQRVVLLAPRDGEAVASGLWRMAPVTSVAWAPDGRSFV 1267



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 66/212 (31%), Gaps = 30/212 (14%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTR--IDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            +  ++   +Y       V +   R  +  A  +   F        FS++GK     + +
Sbjct: 309 HDG-RIHSVSYAPGGKAFVSVGGGRAVVWEAGTQKRRFSVPAEFAAFSADGKSL-FVLAE 366

Query: 279 DEAMDIYSVDLQSNAT---ERLTNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQS 333
           DE     ++D  +      ++      I    +A+++ D S+ V   + +G         
Sbjct: 367 DEFR---TLDAGTGKVQATKKRDKPEAIYRGTTAAFTADGSKWV---EFDGNVHHLRGDF 420

Query: 334 NGSDQ----KRISQDKEASY---FDPVWSPQGDLIAFTKF----SGEKFAIGVMKKDGSQ 382
            G       +R+S   E          +SP G   A   +          + V       
Sbjct: 421 KGGAPALAGQRVSTRDEYKRIFGRGGAFSPDGTRFAGIHWKHAPEDANGVLSVWDAVTGV 480

Query: 383 ERLLVEDSNLQAPT----WSPSGRSLIFSRKK 410
               +   N +AP     WSP G  L   R  
Sbjct: 481 RTGALALPNSEAPAFSFAWSPDGTELAVGRYS 512



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 53/335 (15%), Positives = 91/335 (27%), Gaps = 62/335 (18%)

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD------------IYQSITGEKGD 172
               +L D +   ++  + F   P +   ++   S D                     G 
Sbjct: 574 TANVQLLDARTGAEL--QWFDGFPDNLPVMSLAFSPDGKRIVCGAGNFPDVIGFDPPAGA 631

Query: 173 FNSRILFVSESVVSGII------KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
              R+L V E  V G+         S  ++ RDG  I  +  +                +
Sbjct: 632 KTLRVLNVEEPSVRGMRGVAFGPDGSRYIVFRDG--IIEVFDAATGKPLYTAGGEAGCLL 689

Query: 227 AYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           A       +   + L D R  R   +R  N ++      FS +GKR  +        ++ 
Sbjct: 690 ADNGLVVLEPRLISLYDARGHRTAGRRPPNTKAKWEHAVFSPDGKRYALHF----GQNVR 745

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             D+ + A           + AS      QI            +     G    R+    
Sbjct: 746 VYDIATGAEAFWLEG---QLEASGMSSGHQIA-------PTVQFTDDGKGLIVSRVKLTA 795

Query: 346 EASYFDPVWSP-QGDLI-AFTKFSGEKFAIGVMKKDGSQERL------------------ 385
           +      VWS   G  +  F     E+    V    G    +                  
Sbjct: 796 DGPLGAGVWSATDGKRLDTFVPNGKEQMEWAVPAPSGGTVAISFGTRVEIWATGNGAKNP 855

Query: 386 ---LVEDSNLQAPTWSPSGRSLIFSRKK--DGDTG 415
                    + +  +SP G  +    +K   GD G
Sbjct: 856 VHRFASSWRVDSLAYSPDGTRIAVGSRKEVGGDGG 890


>gi|83945290|ref|ZP_00957639.1| putative peptidase [Oceanicaulis alexandrii HTCC2633]
 gi|83851460|gb|EAP89316.1| putative peptidase [Oceanicaulis alexandrii HTCC2633]
          Length = 659

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 66/176 (37%), Gaps = 8/176 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDR 322
            FS      LIS  +    + Y+++ ++     LT +      A ++ P   +I+  +D 
Sbjct: 69  AFSHQSGDILISSDETGVFNAYALNPETGEKRALTTSDSNATFALTWFPTDERILVTADN 128

Query: 323 EGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAIGVMKK 378
            G     ++V  ++G +   ++  +        WS  G    +   +     F +     
Sbjct: 129 GGDELNHVFVRHADG-ELVDLTPGENVKAGFAGWSADGSYFWLTTNERDPSAFDLYAYDA 187

Query: 379 DGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +  +  +L E+++       SP GR L  +R +     S +   DL      ++ T
Sbjct: 188 ETYERTMLFENTDALDISAVSPDGRWLALNRSRT-SADSDILLADLTTDAAPVLIT 242



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/268 (16%), Positives = 89/268 (33%), Gaps = 14/268 (5%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI-----RYLTPSRDQ 212
            S D++ + T           F  +S    I  +   V +    N      R LT S   
Sbjct: 49  YSADVFFNTTSYSLAGGGGHAFSHQSGDILISSDETGVFNAYALNPETGEKRALTTSDSN 108

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             F   + P  +++     +  D L    +                      +S++G   
Sbjct: 109 ATFALTWFPTDERILVTADNGGDELNHVFVRHADGELVDLTPGENVKAGFAGWSADGSYF 168

Query: 273 LISVQKDE--AMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDR-EGKEQL 328
            ++  + +  A D+Y+ D ++     L  NT  ++ISA  SPD   +     R      +
Sbjct: 169 WLTTNERDPSAFDLYAYDAETYERTMLFENTDALDISAV-SPDGRWLALNRSRTSADSDI 227

Query: 329 YVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERL 385
            +          +  + E +  Y    ++     + +      ++        +  +   
Sbjct: 228 LLADLTTDAAPVLITEHEGNIAYGAYDFTADSSALIYATNEYGEWNQAWSYDLESGERAP 287

Query: 386 LVE-DSNLQAPTWSPSGRSLIFSRKKDG 412
           L+E D ++    +SPSGR  I +   DG
Sbjct: 288 LIEADWDVMYVGFSPSGRYRISAINNDG 315



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 53/151 (35%), Gaps = 12/151 (7%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++S  S  I+  SD  G    Y +     +++ ++     + F   W P  + I  T 
Sbjct: 67  GHAFSHQSGDILISSDETGVFNAYALNPETGEKRALTTSDSNATFALTWFPTDERILVTA 126

Query: 366 FSGEK--FAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
            +G      + V   DG +   L    N++A    WS  G     +  +   +   LY+ 
Sbjct: 127 DNGGDELNHVFVRHADG-ELVDLTPGENVKAGFAGWSADGSYFWLTTNERDPSAFDLYAY 185

Query: 422 DLNGRNETLINTPAYA-------SDPQWVGF 445
           D      T++     A        D +W+  
Sbjct: 186 DAETYERTMLFENTDALDISAVSPDGRWLAL 216



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 88/269 (32%), Gaps = 13/269 (4%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY- 231
           F +    +  +   G   N + V   DG  +  LTP  +       +S +       T  
Sbjct: 116 FPTDERILVTADNGGDELNHVFVRHADGE-LVDLTPGENVKAGFAGWSADGSYFWLTTNE 174

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQ 290
            D     +Y  D           N  ++ ++   S +G+   ++  +  A  DI   DL 
Sbjct: 175 RDPSAFDLYAYDAETYERTMLFENTDALDIS-AVSPDGRWLALNRSRTSADSDILLADLT 233

Query: 291 SNATERL-TNTLFINISASYS--PDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKE 346
           ++A   L T         +Y    DSS +++ ++  G   Q +       ++  +  + +
Sbjct: 234 TDAAPVLITEHEGNIAYGAYDFTADSSALIYATNEYGEWNQAWSYDLESGERAPLI-EAD 292

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRS 403
                  +SP G        +     + V+  +  +   L +     +L    ++     
Sbjct: 293 WDVMYVGFSPSGRYRISAINNDGFTDVTVLDTESGETVSLPDSVPSGDLAGVRFNADETE 352

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + F         + ++ ++L       + 
Sbjct: 353 MTFGVTSS-IAPNNIHWVNLETGEHRQLT 380


>gi|148658008|ref|YP_001278213.1| WD-40 repeat-containing protein [Roseiflexus sp. RS-1]
 gi|148570118|gb|ABQ92263.1| WD-40 repeat protein [Roseiflexus sp. RS-1]
          Length = 1152

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 67/185 (36%), Gaps = 10/185 (5%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLT 298
           + +      P R+ N          S +G R   +     ++ ++  DL         L 
Sbjct: 794 IWNLTDPGLPPRVVNTPGSPTLLVLSRDGARLATTGADPTSVRLW--DLSGTMPVARELA 851

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQ 357
               IN + + S +  Q+    D +G   +Y + +  +  +R+S     ++     +SP 
Sbjct: 852 APGGINTALAISDNGRQLA-IGDDQGVVLVYDLTNPSATPQRLSGLGGRSAVRSLAFSPD 910

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G L+A      +     +    GS  R     +     T+S +GR +++      D   +
Sbjct: 911 GQLLATGNADSQARLYNLASGSGSYTRERTRGALTSI-TFSNNGRWIVYGS---ADGQVR 966

Query: 418 LYSID 422
           L+ + 
Sbjct: 967 LWRLS 971


>gi|326800681|ref|YP_004318500.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
 gi|326551445|gb|ADZ79830.1| OmpA/MotB domain protein [Sphingobacterium sp. 21]
          Length = 650

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 82/251 (32%), Gaps = 41/251 (16%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR------APKRIGNFRSMILA 262
           +     + P  + ++  + +       +  +Y+   +          P ++        A
Sbjct: 180 NSSDDEYFPMLTADRSSIIFTRQKKGGLEYIYVSQYQDSAWKQALPIPGKVNTESYSEGA 239

Query: 263 PRFSSNGKRALISV----QKDEAMDIYSVDLQS---NATERL---TNTLFINISASYSPD 312
              S +G+    +         + DIY    +         L    NT       + SPD
Sbjct: 240 HCISPDGRYLFFTGCNKPDGKGSCDIYISHWEGSAWGIPHNLGSPINTGSWEAQPAISPD 299

Query: 313 SSQIVFESDRE---GKEQLY--VMQSNGS-DQKRISQDKEASYFD---PVWSPQGDLIAF 363
            + + F S+R+   G   ++   +Q +GS    +   DK  + FD   P      + + F
Sbjct: 300 GNTLYFVSNRKGGFGGNDIWYSTLQQDGSWGVPQNMGDKVNTSFDESTPFIHADNETLYF 359

Query: 364 TKFSGEKF---AIGVMKKDGSQERLLVEDSNLQAP----------TWSPSGRSLIFSRKK 410
                  F    + + K D    RL     N+  P          T S  G +  F+ ++
Sbjct: 360 ASNGWPGFGNKDLFISKLDHGGNRL--SPVNMGTPINDHLEQRALTVSLDGSTAYFAAER 417

Query: 411 -DGDTGSKLYS 420
             G  G  +Y+
Sbjct: 418 PGGKGGLDIYT 428


>gi|228919110|ref|ZP_04082488.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228840551|gb|EEM85814.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 655

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 105/292 (35%), Gaps = 54/292 (18%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----- 234
           ++     G  KN + V   DG     +T  ++ +    ++ P  + + Y T   E     
Sbjct: 83  IAYLSPVGDGKNQIFVKSLDGYREVQITDEKEGVSTF-KWGPTGKGLYYVTQSKECEEIK 141

Query: 235 ------------------------DILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSS 267
                                   +I +V   +T                        S+
Sbjct: 142 KRKDLYGDFQHIGKEHQNNCLYYIEIEKVIQSNTDEHENRVVYQLTDGKDFHIHEFDISN 201

Query: 268 NGKRALISVQKDEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-S 320
           +GK+ +        M      D+Y + +++   ++L     +  S  +SPD S+I +  S
Sbjct: 202 DGKKVVFMATPSSNMEDYINGDLYILHIKAGELQKLNVNKLLGGSVCFSPDGSKICYTAS 261

Query: 321 DREGKE--------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            RE            L +   N  +  ++  D +++     W+ +G LI     +   + 
Sbjct: 262 IREKDYYRNHIQDSTLEIYDINTGELIQLLTDFDSTVMPLQWTAKGVLI--RWQNKTNYL 319

Query: 373 IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           IG++ +DG+ E +L E  D  +   + +  G+ + +++    +T  ++Y  D
Sbjct: 320 IGLLAEDGTVE-ILSEKVDGFIMDASITKDGKHISYNKAITNET-FEIYLDD 369



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 96/293 (32%), Gaps = 45/293 (15%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++        +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 33  VAFVKKTADWKENTYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDARCIAYLSPVGD 91

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQS-- 291
              ++++      R  + I + +  +   ++   GK      Q  E  +I    DL    
Sbjct: 92  GKNQIFVKSLDGYREVQ-ITDEKEGVSTFKWGPTGKGLYYVTQSKECEEIKKRKDLYGDF 150

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  +     +I I           V +S+ +  E   V         +++  K+  
Sbjct: 151 QHIGKEHQNNCLYYIEIE---------KVIQSNTDEHENRVVY--------QLTDGKDFH 193

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLL-VEDSNLQAPTWSPSG 401
             +   S  G  + F               + ++     + + L V      +  +SP G
Sbjct: 194 IHEFDISNDGKKVVFMATPSSNMEDYINGDLYILHIKAGELQKLNVNKLLGGSVCFSPDG 253

Query: 402 RSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
             + ++         R    D+  ++Y I+  G    L+        P QW  
Sbjct: 254 SKICYTASIREKDYYRNHIQDSTLEIYDIN-TGELIQLLTDFDSTVMPLQWTA 305



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 68/202 (33%), Gaps = 47/202 (23%)

Query: 266 SSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GK            +      ++  +     +  L+N    +    +SPD+  I + 
Sbjct: 27  SDDGKNVAFVKKTADWKENTYRNHVWIYEKDKKQSYPLSNGDIDSTHPLWSPDARCIAYL 86

Query: 320 SDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----------- 367
           S   +GK Q++V   +G  + +I+ +KE       W P G  + +   S           
Sbjct: 87  SPVGDGKNQIFVKSLDGYREVQITDEKEG-VSTFKWGPTGKGLYYVTQSKECEEIKKRKD 145

Query: 368 --GEKFAIG---------------VMKKDGSQ-----ERLLVE--DSNLQAPTWSPSGRS 403
             G+   IG               V++ +  +        L +  D ++     S  G+ 
Sbjct: 146 LYGDFQHIGKEHQNNCLYYIEIEKVIQSNTDEHENRVVYQLTDGKDFHIHEFDISNDGKK 205

Query: 404 LIF----SRKKDGDTGSKLYSI 421
           ++F    S   +      LY +
Sbjct: 206 VVFMATPSSNMEDYINGDLYIL 227



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        +   +  +++ + +      +S + +     P+WSP   
Sbjct: 23  STNISDDGKNVAFVKKTADWKENTYRNHVWIYEKDKKQSYPLS-NGDIDSTHPLWSPDAR 81

Query: 360 LIAFTKFSG-EKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKK 410
            IA+    G  K  I V   DG +E  + ++   +    W P+G+ L +  + 
Sbjct: 82  CIAYLSPVGDGKNQIFVKSLDGYREVQITDEKEGVSTFKWGPTGKGLYYVTQS 134


>gi|111221403|ref|YP_712197.1| hypothetical protein FRAAL1965 [Frankia alni ACN14a]
 gi|111148935|emb|CAJ60614.1| hypothetical protein FRAAL1965 [Frankia alni ACN14a]
          Length = 741

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 66/440 (15%), Positives = 133/440 (30%), Gaps = 74/440 (16%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
            +    +  L L ++L+      +    + +       +  +IA  +   I       + 
Sbjct: 349 RQRPPSRSLLFLAVILVVLMPVAAGLWQIGLLRADHRAAAPAIALERAAEIGSTPVAAAP 408

Query: 68  VV-----SKDLQR--SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           +        D +   S  F+++        +T   S P      S  A   +   V   G
Sbjct: 409 ITDPGTYGTDGRNGSSTRFDVLPPAPAGGAVTLVPSGPVRSA--SYSADGRMVATVGTRG 466

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                    +WDV +  +                              + G         
Sbjct: 467 G------LAVWDVAEGGRPTRLGQV-----------------------DNGRALDVAFIR 497

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPS-RDQILFEPRFSPNQQKVAYATYDDEDILR 238
           S S+++    +++ + D RD    R ++             SP+ +  A    +DE    
Sbjct: 498 SGSLITISSDSAIRLWDVRDPHRPRAVSRQVTPSPPHSLAISPDGEVAAIGAANDE---- 553

Query: 239 VYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           V+L D     AP+R+G         + +  FS +G+    S   D  + ++  D+ + A 
Sbjct: 554 VWLWDIADVSAPRRLGVVLTGHAGAVSSVAFSPDGRTLA-SGSTDHTVRLW--DVATPAR 610

Query: 295 ER-----LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD----K 345
            R     LT       S ++SPD   +        ++ L +     +   +        +
Sbjct: 611 PRQVGVALTGHAGAVSSVAFSPDGRILA----SGAEDTLRLWNVGDAAHPQALGAPLAIR 666

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSG 401
                   + P    +A     G      V     +  R L        P    ++SP G
Sbjct: 667 SGELLSLAFGPDNRTLATGGTEGSVGFWDVSDP--ALPRTLGASPAHGGPVFSVSFSPDG 724

Query: 402 RSLIFSRKKDGDTGSKLYSI 421
           R +       G   ++L+++
Sbjct: 725 RRVA----SAGGDQTRLWTV 740


>gi|322434177|ref|YP_004216389.1| peptidase S9, prolyl oligopeptidase active site region
           [Acidobacterium sp. MP5ACTX9]
 gi|321161904|gb|ADW67609.1| peptidase S9, prolyl oligopeptidase active site region
           [Acidobacterium sp. MP5ACTX9]
          Length = 802

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 59/412 (14%), Positives = 120/412 (29%), Gaps = 103/412 (25%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAH------TISD-DIYQSITGEKGDFNSRILFVSESVV 185
           V      +G+      +  R + H      T  D    + ++  +     + +  S + V
Sbjct: 12  VGLGSVAMGQAAVEPTSQNRDMGHPAKRAMTFQDLMAMKRVSDPQVSPGGKWVLFSVTDV 71

Query: 186 S---GIIKNSLCVM-------DRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S       N L V+       + D G  +     +        RFSP+ Q V+Y     +
Sbjct: 72  SLAGNTKVNHLWVVPLQPTSENPDMGHPVVERQITFSTGESFGRFSPDGQFVSYTGAPMK 131

Query: 235 DILR------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA---------------- 272
           D          +   T      + +           +S + KR                 
Sbjct: 132 DDPYSRITIATWDEKTGTIGMGRTLQAVSGDADGAVWSPDNKRFLFTTQVYPECSDKAKW 191

Query: 273 ---------------------------------LISVQKDEAMDIYSVDLQSNATERLT- 298
                                              + QK   + +    L       LT 
Sbjct: 192 SEEDACDKAKDEAADKSPVKAQLFTGLLYRHWNAFTGQKRTHVIVADFSLAGPNPRDLTP 251

Query: 299 -----------NTLFINISASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRI 341
                       +L   +  +++PD  +I + ++            ++ ++ + +  + +
Sbjct: 252 KSVVGDAETPTFSLGGPLGYAWAPDGKEIAYVTNLDTVPAASTNNDVFTLRLDEAGARPV 311

Query: 342 SQDKE-ASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVE--DSNLQ 393
                  S   P +SP G  +AF   +      ++F + V  +     R L+   D  + 
Sbjct: 312 KVSTSLGSDDGPAYSPDGRWLAFRSQARAGYESDRFRLMVFDRQAKTIRELMPKFDRWVD 371

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
              W+   ++L F+    G    +++SI L+G    L       S  +W  F
Sbjct: 372 EFVWAGDSQALYFASGVSGS--EQVFSIGLSGNELNLRTF--VDSRGEWGEF 419



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 77/223 (34%), Gaps = 31/223 (13%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRD--GANIRYLTPSR--------DQILFEP---RFSP 221
           + +L+   +  +G  +  + V D    G N R LTP             L  P    ++P
Sbjct: 216 TGLLYRHWNAFTGQKRTHVIVADFSLAGPNPRDLTPKSVVGDAETPTFSLGGPLGYAWAP 275

Query: 222 NQQKVAYATYDDEDILRVYLMDT------RIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           + +++AY T  D         D            P ++         P +S +G+     
Sbjct: 276 DGKEIAYVTNLDTVPAASTNNDVFTLRLDEAGARPVKVSTSLGSDDGPAYSPDGRWLAFR 335

Query: 276 VQK-----DEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQL 328
            Q       +   +   D Q+     L      +++    ++ DS  + F S   G EQ+
Sbjct: 336 SQARAGYESDRFRLMVFDRQAKTIRELMPKFDRWVD-EFVWAGDSQALYFASGVSGSEQV 394

Query: 329 YVMQSNGSDQKRISQ-DKEASYFDPV---WSPQGDLIAFTKFS 367
           + +  +G++    +  D    + +      S  G  +  ++ +
Sbjct: 395 FSIGLSGNELNLRTFVDSRGEWGEFAELNISHDGTFLVSSRST 437



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 51/165 (30%), Gaps = 19/165 (11%)

Query: 264 RFSSNGKRALISVQKDEAMDIYS--------VDLQSNATERLTNTLFINISASYSPDSSQ 315
            ++ +GK        D      +        +D       +++ +L  +   +YSPD   
Sbjct: 272 AWAPDGKEIAYVTNLDTVPAASTNNDVFTLRLDEAGARPVKVSTSLGSDDGPAYSPDGRW 331

Query: 316 IVFESD-REG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           + F S  R G    + +L V        + +    +    + VW+     + F       
Sbjct: 332 LAFRSQARAGYESDRFRLMVFDRQAKTIRELMPKFDRWVDEFVWAGDSQALYFASGVSGS 391

Query: 371 FAIGVMKKDGSQERLLV------EDSNLQAPTWSPSGRSLIFSRK 409
             +  +   G++  L        E         S  G  L+ SR 
Sbjct: 392 EQVFSIGLSGNELNLRTFVDSRGEWGEFAELNISHDGTFLVSSRS 436


>gi|218262998|ref|ZP_03477258.1| hypothetical protein PRABACTJOHN_02938 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223025|gb|EEC95675.1| hypothetical protein PRABACTJOHN_02938 [Parabacteroides johnsonii
           DSM 18315]
          Length = 491

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 48/245 (19%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------------ 277
              +     + +   +I++   +     S ++ P +  +GK    SV             
Sbjct: 192 HMRETFPGTILVDGDKIEKLNTKTRETISSLVYPSWHPSGKYVAFSVNTTKQAFHLNDKN 251

Query: 278 ----KDEAMDIYSVDLQSNA---TERLTNTLFINISASYSPDSSQIVFESDREG------ 324
                DEA D+   D++ +       + +        ++SPD   + F +          
Sbjct: 252 RVEVYDEASDVVVYDVEKHEIVTASTIFSKDAFETFPTFSPDGKTLYFCTAEARPIPQEY 311

Query: 325 ---KEQLYVMQSN------GSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAI 373
              K  L  +  +      G+    +   K    S   P  SP G  + +T      F+I
Sbjct: 312 SEVKYNLCSISFDPATRTFGTQVDTLYNAKSGGMSASFPRVSPDGRYLLYTLSGYGNFSI 371

Query: 374 GVMKKDG--SQERLLVEDSNLQAP--------TWSPSGRSLIFSRKK--DGDTGSKLYSI 421
                D   +  ++       +          +WS + R  +FS ++     T   +  +
Sbjct: 372 WHKDADLYMTDLQIGTSRPLAEVNSDDVESYHSWSSNSRWFVFSSRRIDGLYTRPYIAYV 431

Query: 422 DLNGR 426
             +G+
Sbjct: 432 GEDGK 436



 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 49/139 (35%), Gaps = 25/139 (17%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYL----------MDTRIDRAPKRI----- 253
           S+D     P FSP+ + + + T +   I + Y            D        ++     
Sbjct: 280 SKDAFETFPTFSPDGKTLYFCTAEARPIPQEYSEVKYNLCSISFDPATRTFGTQVDTLYN 339

Query: 254 GNFRSMILA-PRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLFINI 305
                M  + PR S +G+  L ++             D+Y  DLQ   +  L      ++
Sbjct: 340 AKSGGMSASFPRVSPDGRYLLYTLSGYGNFSIWHKDADLYMTDLQIGTSRPLAEVNSDDV 399

Query: 306 S--ASYSPDSSQIVFESDR 322
               S+S +S   VF S R
Sbjct: 400 ESYHSWSSNSRWFVFSSRR 418



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 81/292 (27%), Gaps = 64/292 (21%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            H+           +K  F+ R  F    +V G     L             T      L
Sbjct: 178 CHSFCMQN-----PDKMLFHMRETFPGTILVDGDKIEKL----------NTKTRETISSL 222

Query: 215 FEPRFSPNQQKVAYATYDDEDILR---------------VYLMDTRIDRAPKRIGNFRSM 259
             P + P+ + VA++    +                   V + D            F   
Sbjct: 223 VYPSWHPSGKYVAFSVNTTKQAFHLNDKNRVEVYDEASDVVVYDVEKHEIVTASTIFSKD 282

Query: 260 ILA--PRFSSNGKRALISVQK---------DEAMDIYSVDLQ------SNATERLTNTLF 302
                P FS +GK       +         +   ++ S+             + L N   
Sbjct: 283 AFETFPTFSPDGKTLYFCTAEARPIPQEYSEVKYNLCSISFDPATRTFGTQVDTLYNAKS 342

Query: 303 INISASY---SPDSSQIVFESDREGKEQLYVMQSN--------GSDQKRISQDKEASYFD 351
             +SAS+   SPD   +++     G   ++   ++        G+ +     + +     
Sbjct: 343 GGMSASFPRVSPDGRYLLYTLSGYGNFSIWHKDADLYMTDLQIGTSRPLAEVNSDDVESY 402

Query: 352 PVWSPQGDLIAFTKFS----GEKFAIGVMKKDGSQER--LLVEDSNLQAPTW 397
             WS       F+         +  I  + +DG   +  LL +      P++
Sbjct: 403 HSWSSNSRWFVFSSRRIDGLYTRPYIAYVGEDGKVGKPFLLPQKDVGFYPSF 454


>gi|120404908|ref|YP_954737.1| peptidase S9 prolyl oligopeptidase [Mycobacterium vanbaalenii
           PYR-1]
 gi|119957726|gb|ABM14731.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Mycobacterium vanbaalenii PYR-1]
          Length = 694

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 74/257 (28%), Gaps = 14/257 (5%)

Query: 84  QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK 143
             +     T+ D   R +             +V         V +   D+   +      
Sbjct: 158 TSAMLASATDVDDDKRLRAARKDN-------KVSAVLHAGYPVRYWDHDLGPEQP---HL 207

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           F  +    R +  T    + ++      D    +           ++ +L  +D      
Sbjct: 208 FDITEERPRDLTPTPGQALREAHFDLSRDGAFLVTTWQGPAPGAALRTTLVHVDVATGRR 267

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +   RD  L  P  SP+ Q VAY            R+ L   R    P  +       
Sbjct: 268 TTIVDDRDADLGNPAVSPDGQSVAYTRETISTPRKAPRITLCLLRFGEEPVELTTGWDRW 327

Query: 261 -LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             +  +S++G   +I+        I++VD  + A   L    F       +P        
Sbjct: 328 PTSVTWSADGSSVIITADDHGRGPIFAVDPDTGAVRTLVADDFTYSDVRPAPGGVLFALR 387

Query: 320 SDREGKEQLYVMQSNGS 336
           S     +    + ++G+
Sbjct: 388 SSYAAPQHPVRIDADGT 404



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 62/200 (31%), Gaps = 17/200 (8%)

Query: 246 IDRAPKRIGNFRSMIL---APRFSSNGKRALISVQKDE-----AMDIYSVDLQSNATERL 297
            +  P+ +       L       S +G   + + Q           +  VD+ +     +
Sbjct: 211 TEERPRDLTPTPGQALREAHFDLSRDGAFLVTTWQGPAPGAALRTTLVHVDVATGRRTTI 270

Query: 298 TNTLFIN-ISASYSPDSSQIVFESD-----REGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            +    +  + + SPD   + +  +     R+       +   G +   ++   +     
Sbjct: 271 VDDRDADLGNPAVSPDGQSVAYTRETISTPRKAPRITLCLLRFGEEPVELTTGWDRWPTS 330

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKK 410
             WS  G  +  T     +  I  +  D    R LV +D        +P G  ++F+ + 
Sbjct: 331 VTWSADGSSVIITADDHGRGPIFAVDPDTGAVRTLVADDFTYSDVRPAPGG--VLFALRS 388

Query: 411 DGDTGSKLYSIDLNGRNETL 430
                     ID +G    L
Sbjct: 389 SYAAPQHPVRIDADGTVTVL 408



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 83/268 (30%), Gaps = 63/268 (23%)

Query: 205 YLTPSRDQILFEPRF-----SPNQQKVAYATYDDED-----ILRVYLMDTRIDRAPKRIG 254
                 D+ L  PR      SP+  +V       +D     +  ++ +D    +  +R+ 
Sbjct: 28  TAFHDLDEFLALPRVAGLAVSPDGTRVVTTVSRLDDKRTEFVSALWELDPSGQQPARRLT 87

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATE----------RLT 298
                  AP F+++G    ++ +     D      ++ +                  R+T
Sbjct: 88  FGAKGESAPEFTADGDLLFLAARPTGDDDEPTRKALWRLPAAGGEAHEVATLPGGVDRVT 147

Query: 299 N---------TLFINISAS-YSPDSSQIVFESDRE------------------GKEQLYV 330
           +         T  +  SA+    D        D +                  G EQ ++
Sbjct: 148 SAREAATTLITSAMLASATDVDDDKRLRAARKDNKVSAVLHAGYPVRYWDHDLGPEQPHL 207

Query: 331 MQSNGSDQKRISQDKEASYFDPVW--SPQGDLIAFTKFS---GEKFAIGVMKKDGSQERL 385
                   + ++     +  +  +  S  G  +  T      G      ++  D +  R 
Sbjct: 208 FDITEERPRDLTPTPGQALREAHFDLSRDGAFLVTTWQGPAPGAALRTTLVHVDVATGRR 267

Query: 386 LV----EDSNLQAPTWSPSGRSLIFSRK 409
                  D++L  P  SP G+S+ ++R+
Sbjct: 268 TTIVDDRDADLGNPAVSPDGQSVAYTRE 295


>gi|238064577|ref|ZP_04609286.1| WD-repeat protein [Micromonospora sp. ATCC 39149]
 gi|237886388|gb|EEP75216.1| WD-repeat protein [Micromonospora sp. ATCC 39149]
          Length = 1866

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 89/300 (29%), Gaps = 36/300 (12%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G ++  G     V  R+W+V   +             W    H     ++ +     G  
Sbjct: 1270 GTLLATGDKDGVV--RVWEVGTGQL-----------RWELPGHRA--PVWTATFNPDG-- 1312

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     ++ +G     + + D     +R    + D++ +  R  P    +A    D 
Sbjct: 1313 --------STLATGDDGGVVRLWDLRTGRLRQRAEAEDKLTYWLRHDPTGTYLAGGAEDG 1364

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 + L D R  R   R+      I    F  +G+  + S     ++  + +      
Sbjct: 1365 ----ALRLWDPRTGRLLHRLTGHAGPIYTFDFHPSGRHIV-SADVTGSVRRWDLPEGGGP 1419

Query: 294  T--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                 L          ++SP  +      D +G  +++       + +       AS + 
Sbjct: 1420 PVGRELGRHSGAVYRVAFSPRGTMFA-TGDSDGWVRIW--DDATCEVRHELDRHYASVWP 1476

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              + P GD +  +        +   +   S   L      ++A  ++  G  L  S    
Sbjct: 1477 ITFRPDGDRLVSSSNDFTT-KVWSTRSGESAAVLRGHGRQMRAVAFNRDGSMLATSSNDG 1535



 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 57/307 (18%), Positives = 103/307 (33%), Gaps = 24/307 (7%)

Query: 145  FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---GA 201
             SS     ++   I+ +  Q +   + D    + F +E  +     N   V   D   G 
Sbjct: 1530 TSSNDGLVRLWDPIAGECRQVLESNRMDRLVSVAFGAEPHLLATASNDGRVYLWDAAAGV 1589

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
              R L  S D +     F P   ++A A  D      V L+     R    +  FR  + 
Sbjct: 1590 EGRQLEVSSDAVWAM-VFDPAGDRIAVANDDH----TVQLLIRTTGRTVGWLRGFRGRVR 1644

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFES 320
            A  +S +G     +   DE + ++  DL ++    L        +  +Y PD   +   S
Sbjct: 1645 ALAYSPDGATLA-TGSDDELVRLH--DLAADEVRVLPKAHSGRILCLAYRPDGRLLASAS 1701

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              +G   L+          R+ + +    +   + P G  +A    +G++  I +     
Sbjct: 1702 -VDGTAVLW--DPQEQAVLRVLRPERRKLWTVAFHPGGRFLA---TAGDEEVIDIWDAQT 1755

Query: 381  SQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             Q    L      + +  +SP G  L        D   +L+ +  +G            S
Sbjct: 1756 GQRVQELTGHTRRIWSVAFSPGGDLLASGST---DGTVRLWQLAPDGTATHRCTLLG-LS 1811

Query: 439  DPQWVGF 445
            +  W  F
Sbjct: 1812 ERSWAAF 1818



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 67/175 (38%), Gaps = 9/175 (5%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +R L  +    +    + P+ + +A A+ D        L D +     + +   R  +  
Sbjct: 1674 VRVLPKAHSGRILCLAYRPDGRLLASASVDG----TAVLWDPQEQAVLRVLRPERRKLWT 1729

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
              F   G+    +   +E +DI+  D Q+    + LT       S ++SP    +   S 
Sbjct: 1730 VAFHPGGRFLA-TAGDEEVIDIW--DAQTGQRVQELTGHTRRIWSVAFSPGGDLLASGST 1786

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             +G  +L+ +  +G+   R +    +      ++P G   +  + + + + +  M
Sbjct: 1787 -DGTVRLWQLAPDGTATHRCTLLGLSERSWAAFTPNGRHKSAGEVAADFWHVAGM 1840


>gi|332533910|ref|ZP_08409764.1| hypothetical protein PH505_ax00110 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332036629|gb|EGI73094.1| hypothetical protein PH505_ax00110 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 938

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 73/168 (43%), Gaps = 8/168 (4%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S   ++  DI+S +  +   ++LT    I      S +   +  E  R+G  +L  +  N
Sbjct: 393 SGIYNKVSDIFSYNTDTGNIKQLTELAGIRRFNVTS-NGETLYGEQIRDGYSELVKVDLN 451

Query: 335 GSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVEDSNL 392
                 + ++  E +Y  P+ SP    +A+   S  E + + +    G++++L+   +  
Sbjct: 452 TQTITPLFTKSLETTYDYPILSPDETKLAYLSTSLNENWQLYIQDVGGNKQQLVPMPNGY 511

Query: 393 QA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           Q    P++S +G SL F      ++ + +Y+ ++  +  + +     A
Sbjct: 512 QYLSQPSFSHNGESLYFVA--GLNSATDIYNYNIESKTLSKLTQGQEA 557



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 65/181 (35%), Gaps = 14/181 (7%)

Query: 160 DDIYQSITGEKGDFN-SRILFVSESVVSGIIKNSLCVMDRDGA--------NIRYLTP-- 208
            DI+   T        + +  +    V+   +       RDG         N + +TP  
Sbjct: 400 SDIFSYNTDTGNIKQLTELAGIRRFNVTSNGETLYGEQIRDGYSELVKVDLNTQTITPLF 459

Query: 209 --SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRF 265
             S +     P  SP++ K+AY +    +  ++Y+ D   ++       N    +  P F
Sbjct: 460 TKSLETTYDYPILSPDETKLAYLSTSLNENWQLYIQDVGGNKQQLVPMPNGYQYLSQPSF 519

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S NG+        + A DIY+ +++S    +LT             D S + F    +G 
Sbjct: 520 SHNGESLYFVAGLNSATDIYNYNIESKTLSKLTQGQEAVAHPIEMADGSLLYFSITADGP 579

Query: 326 E 326
            
Sbjct: 580 N 580



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 82/244 (33%), Gaps = 13/244 (5%)

Query: 160 DDIYQS-ITGEKGDFNSRILFVSESVVSGIIKN---SLCVMDRDGANIRYLTPSRDQILF 215
           + I Q+ I   +   ++ + F + S     I N    +   + D  NI+ LT       F
Sbjct: 365 NQINQAGIANPQWVNSTTLYFNAYSNEESGIYNKVSDIFSYNTDTGNIKQLTELAGIRRF 424

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI- 274
               + N + +      D     V +        P    +  +    P  S +  +    
Sbjct: 425 N--VTSNGETLYGEQIRDGYSELVKVDLNTQTITPLFTKSLETTYDYPILSPDETKLAYL 482

Query: 275 SVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           S   +E   +Y  D+     ++L    N        S+S +   + F +       +Y  
Sbjct: 483 STSLNENWQLYIQDV-GGNKQQLVPMPNGYQYLSQPSFSHNGESLYFVAGLNSATDIYNY 541

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                   +++Q +EA    P+    G L+ F   + +   I  + K  +   +    +N
Sbjct: 542 NIESKTLSKLTQGQEA-VAHPIEMADGSLLYF-SITADGPNIKTLPKAINSTVVTEFSAN 599

Query: 392 LQAP 395
            +AP
Sbjct: 600 KKAP 603



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 40/347 (11%), Positives = 101/347 (29%), Gaps = 62/347 (17%)

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R+ A   +   Y  + GE+G     + ++  S     ++ +      D  ++       
Sbjct: 182 LREFAQQGALPTYGQLNGEQGFMGGSMAYLMGSRFLNWLEKNYSEQTLD--SVWTRMQGV 239

Query: 211 DQILFEPRFSPN-QQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
               F+  FS    Q  A     +        +++   +  ++       N  +    P 
Sbjct: 240 KTRNFDEAFSGVFGQSAAKLYRRFIAEYTYKAMQIEQGEPLLNSELWLELNLYASN--PA 297

Query: 265 FSSNGKRALIS-VQKDEAMDIYSVDLQ---------SNATERLTNTLFIN---------- 304
            S++G +  I    K+    +               +   + L      +          
Sbjct: 298 LSNDGNKIAIVERDKESNTKLIIYSTDDNIKAQEEFTKTQKELLENDAQDIPDTAPGVFK 357

Query: 305 ---------------ISASYSPDSSQIVFESDREGKEQLY-------VMQSNGSDQKRIS 342
                           +  +  +S+ + F +    +  +Y          ++  + K+++
Sbjct: 358 REQKQVLNQINQAGIANPQWV-NSTTLYFNAYSNEESGIYNKVSDIFSYNTDTGNIKQLT 416

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSP 399
           +      F+   +  G+ +   +       +  +  +      L     ++    P  SP
Sbjct: 417 ELAGIRRFN--VTSNGETLYGEQIRDGYSELVKVDLNTQTITPLFTKSLETTYDYPILSP 474

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA---YASDPQWV 443
               L +      +   +LY  D+ G  + L+  P    Y S P + 
Sbjct: 475 DETKLAYLSTSLNE-NWQLYIQDVGGNKQQLVPMPNGYQYLSQPSFS 520


>gi|254787796|ref|YP_003075225.1| lipoprotein [Teredinibacter turnerae T7901]
 gi|237686171|gb|ACR13435.1| putative lipoprotein [Teredinibacter turnerae T7901]
          Length = 997

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 42/186 (22%)

Query: 264 RFSSNGKRALISVQKDE----------AMDIYSVDLQSNATERLTNT-----LFINISAS 308
             S +G + L +++  E            +I+  DL++    R+  +        +I+ +
Sbjct: 125 SVSPDGTKLLFAMRAPEIENADEEDQPTWNIWEYDLETEMLRRIITSDIVAEEGQDINPA 184

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +  D  +I+F S+R+ + +  ++  N      +++D E+                     
Sbjct: 185 FLADG-RIIFSSNRQRRSRAVLLDENKPQFAALTEDGES--------------------- 222

Query: 369 EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR---KKDGDTGSKLYSIDLN 424
           E F + VM+ DG++ + +    S+   PT    GR ++F R    +D      LY+ + N
Sbjct: 223 EAFVLHVMEDDGTEIKQITFNQSHDLYPTQLSDGR-VMFLRWDNYRDSKDHLSLYTANPN 281

Query: 425 GRNETL 430
           G N TL
Sbjct: 282 GSNVTL 287



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 17/92 (18%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGE----------KFAIGVMKKDGSQER------LL 386
              +    D   SP G  + F   + E           + I     +    R      ++
Sbjct: 115 FRPQYDVKDLSVSPDGTKLLFAMRAPEIENADEEDQPTWNIWEYDLETEMLRRIITSDIV 174

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            E+     P +   GR +IFS  +   + + L
Sbjct: 175 AEEGQDINPAFLADGR-IIFSSNRQRRSRAVL 205


>gi|114050869|ref|NP_001040162.1| WD repeat domain 61 [Bombyx mori]
 gi|87248251|gb|ABD36178.1| WD repeat domain 61 [Bombyx mori]
          Length = 322

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 77/216 (35%), Gaps = 16/216 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +     +  +     SP+ + +A  + D      + + D    +  + I    S +    
Sbjct: 66  HTLEGHEMPVVSVAVSPDGETIASTSLDS----SLIIWDLLDGQKIREIQTDSSDMWKIV 121

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDRE 323
           FS +G +   +      + +Y + +     + L T   FI +S ++SPD   I   S  E
Sbjct: 122 FSPDGSQVA-TGGHTGKVTVYGI-INGTVDKVLDTRGKFI-MSVAWSPDGRYIA--SGAE 176

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G   +Y+   +        +    +     +SP+  L+A     G    + V   + +  
Sbjct: 177 GGS-VYLFDVSQGKMLHTIEAHAQAVRSLAFSPKTKLLASASNDG---YVNVYNIESAAL 232

Query: 384 R-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +  L       +  +SP G+ +  +   DG     L
Sbjct: 233 QNKLDHKCWSVSVCFSPDGQRMA-TSAADGSIRVVL 267



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/243 (17%), Positives = 91/243 (37%), Gaps = 24/243 (9%)

Query: 182 ESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E++ S  + +SL + D  DG  IR +      + ++  FSP+  +VA          +V 
Sbjct: 85  ETIASTSLDSSLIIWDLLDGQKIREIQTDSSDM-WKIVFSPDGSQVA----TGGHTGKVT 139

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +         K +      I++  +S +G+    S  +  ++ ++ V  Q      +   
Sbjct: 140 VYGIINGTVDKVLDTRGKFIMSVAWSPDGRYIA-SGAEGGSVYLFDVS-QGKMLHTIEAH 197

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SP +  +   S+ +G   +Y ++   S   +   D +       +SP G  
Sbjct: 198 AQAVRSLAFSPKTKLLASASN-DGYVNVYNIE---SAALQNKLDHKCWSVSVCFSPDGQR 253

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           +A +   G    I V+  +  + R+L         +    ++  G  L+       D   
Sbjct: 254 MATSAADGS---IRVVLLE--EFRVLHTFEEHTHIVCGVQFNADGSKLV---SVSKDKSI 305

Query: 417 KLY 419
            +Y
Sbjct: 306 NIY 308



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 67/192 (34%), Gaps = 6/192 (3%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S    K    T   +++++V+  +         +      +++   S +G+    S   D
Sbjct: 35  SKGPSKDYIVTGGLDNLVKVWSYENNKLELLHTLEGHEMPVVSVAVSPDGETIA-STSLD 93

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            ++ I+ + L       +           +SPD SQ+       GK  +Y +  NG+  K
Sbjct: 94  SSLIIWDL-LDGQKIREIQTDSSDMWKIVFSPDGSQVA-TGGHTGKVTVYGI-INGTVDK 150

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            +    +       WSP G  IA +   G    +  + +      +      +++  +SP
Sbjct: 151 VLDTRGK-FIMSVAWSPDGRYIA-SGAEGGSVYLFDVSQGKMLHTIEAHAQAVRSLAFSP 208

Query: 400 SGRSLIFSRKKD 411
             + L  +    
Sbjct: 209 KTKLLASASNDG 220


>gi|332534894|ref|ZP_08410716.1| dipeptidyl-peptidase IV [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035693|gb|EGI72182.1| dipeptidyl-peptidase IV [Pseudoalteromonas haloplanktis ANT/505]
          Length = 741

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 49/191 (25%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAP------------- 263
           +FSP+  +V Y     +D  R  L +  + D   + + +   +   P             
Sbjct: 46  KFSPDGSRVTYLQGKSDDYNRYDLWEYNLKDNTNRVLVDSAKLFSGPENLSDEEKARRER 105

Query: 264 -----------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                      ++S +GK  L  +  D    +Y  DL S  +++LT+T      A +SP 
Sbjct: 106 QRIFGKGILEYKWSKDGKALLFPLNGD----LYYYDLASAKSKKLTDTEAFETDARFSPK 161

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA----------------SYFDPVWSP 356
            + + F  +    + LY ++     + ++S+D                         WS 
Sbjct: 162 GNYVSFIRE----QNLYALELESGKEIQLSKDGGGVIKNGMAEFVAQEEMSRMTGYWWSG 217

Query: 357 QGDLIAFTKFS 367
               IA+T+  
Sbjct: 218 DETKIAYTRVD 228



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 35/177 (19%)

Query: 265 FSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           FS +G R              D++  +L+ N    L +              S  +F   
Sbjct: 47  FSPDGSRVTYLQGKSDDYNRYDLWEYNLKDNTNRVLVD--------------SAKLF--- 89

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G E L   +    +++RI         +  WS  G  + F         +       +
Sbjct: 90  -SGPENLSDEEKARRERQRIFGKG---ILEYKWSKDGKALLF----PLNGDLYYYDLASA 141

Query: 382 QERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           + + L +    +    +SP G  + F R+++      LY+++L    E  ++     
Sbjct: 142 KSKKLTDTEAFETDARFSPKGNYVSFIREQN------LYALELESGKEIQLSKDGGG 192



 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 32/241 (13%), Positives = 77/241 (31%), Gaps = 41/241 (17%)

Query: 218 RFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKR---------------------- 252
            +S ++ K+AY   D+   ++ +R  +    +    +R                      
Sbjct: 214 WWSGDETKIAYTRVDETPVKEAIRNEIYADEVKLFNQRYPFTGTDNVKIQLGVVKLNDQK 273

Query: 253 -----IGNFRSMILA-PRFSSNGKRALISVQKDEAMDIYS--VDLQSNATER-LTNTL-- 301
                +G    + +A  ++  +G       Q      +     + ++ A +  LT     
Sbjct: 274 VDWIDLGKDEDIYIARAKWLKDGNTLSYQWQNRSQHKLELRFYNSETKAQKVALTENSET 333

Query: 302 FINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +IN+     +  D    V+ S+R+G + LY+ ++NG   ++I+    A         +  
Sbjct: 334 WINLHFDLEFLKDKKHFVWASERDGFKHLYLYRTNGQLVRQITSGDWAVDSLKGIDEKKG 393

Query: 360 LIAFTKFSGEKFAIGVMKK---DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           ++ F           +           + + E         +   ++ I +   D    S
Sbjct: 394 IVYFAGRKDTPLESHLYSAPLFKKGDSKRITEKGQYHNVVLAKDNKTFIDNSSSDNKPNS 453

Query: 417 K 417
            
Sbjct: 454 A 454


>gi|15921425|ref|NP_377094.1| tricorn protease [Sulfolobus tokodaii str. 7]
 gi|20140704|sp|Q972G5|TRIC_SULTO RecName: Full=Putative Tricorn-like protease C-terminal subunit
 gi|15622211|dbj|BAB66203.1| 854aa long hypothetical tricorn protease [Sulfolobus tokodaii str.
           7]
          Length = 854

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 62/160 (38%), Gaps = 24/160 (15%)

Query: 267 SNGKRALIS--------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            NG   ++         + KD ++   +VDL     ER+            SPD  +I+ 
Sbjct: 174 PNGDTVVLDTNDDKLTFLSKDGSIKKLNVDL--GRIERI----------KVSPDGKKILI 221

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMK 377
            ++R    +L++ + + ++ + I + +        W P  +  A+T   S    +I +  
Sbjct: 222 SNNRL---ELWLYEVDTTNLRLIDKSEYDVISQMDWHPDNEWFAYTFPESYSTQSIKLAH 278

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             G   R+        +P++ P GR L F   +  D  + 
Sbjct: 279 ISGKVIRITSPYGYDFSPSFDPDGRYLYFLSARHLDPTND 318



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 38/103 (36%), Gaps = 4/103 (3%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +K+  +     + L ++L +           +   +I    +  + +    +  + 
Sbjct: 213 SPDGKKILIS----NNRLELWLYEVDTTNLRLIDKSEYDVISQMDWHPDNEWFAYTFPES 268

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            +     +   S    R+T+    + S S+ PD   + F S R
Sbjct: 269 YSTQSIKLAHISGKVIRITSPYGYDFSPSFDPDGRYLYFLSAR 311



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 49/131 (37%), Gaps = 7/131 (5%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  L + + D  N+R +  S   ++ +  + P+ +  AY   +      + L    I 
Sbjct: 223 NNRLELWLYEVDTTNLRLIDKSEYDVISQMDWHPDNEWFAYTFPESYSTQSIKLAH--IS 280

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINI 305
               RI +      +P F  +G+       +  D   D    ++     +R+     + +
Sbjct: 281 GKVIRITSPYGYDFSPSFDPDGRYLYFLSARHLDPTNDKVIFNMS---FQRVIKPYLVVL 337

Query: 306 SASYSPDSSQI 316
           S +YSP +  +
Sbjct: 338 SNTYSPFNQSL 348



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 13/149 (8%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           PN   V   T DD+      L     D + K++      I   + S +GK+ LIS  +  
Sbjct: 174 PNGDTVVLDTNDDK------LTFLSKDGSIKKLNVDLGRIERIKVSPDGKKILISNNR-- 225

Query: 281 AMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            ++++  ++ +    RL +    ++     + PD+    +        Q   +       
Sbjct: 226 -LELWLYEVDTTNL-RLIDKSEYDVISQMDWHPDNEWFAYTFPESYSTQSIKLAHISGKV 283

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            RI+       F P + P G  + F    
Sbjct: 284 IRITS-PYGYDFSPSFDPDGRYLYFLSAR 311



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 6/73 (8%)

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            ++ F SD EG   LY +   G D  + +   E  Y+    S  G  I F         I
Sbjct: 40  DRVYFLSDHEGISNLYSVNLEGKDLTKHTNFTE--YYCRNASSDGRRIVFQNSGD----I 93

Query: 374 GVMKKDGSQERLL 386
            +   +  + +LL
Sbjct: 94  YLYDPEKQELKLL 106


>gi|298384100|ref|ZP_06993661.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
 gi|298263704|gb|EFI06567.1| conserved hypothetical protein [Bacteroides sp. 1_1_14]
          Length = 844

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 70/205 (34%), Gaps = 29/205 (14%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---VQKDEAMDIY 285
             Y     L    M+         + +   +   P    +G+  L S     KD+   +Y
Sbjct: 188 CNYFAGGSLSKIKMNGIWAEEETLLTDEDGVYRDPNLHFDGQHLLFSWKKSAKDDDFHLY 247

Query: 286 SVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGK---------EQLYVMQSNG 335
            +DL++   ++LT      +I   Y PD   I+F S R G            +Y+    G
Sbjct: 248 EMDLKTREVKQLTFGKGHADIEGIYLPD-ENILFNSTRSGSAVDCWFTEVSNMYLCDREG 306

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVED 389
              +++  D+  +   P     G  + +T++            +  M  DG+      + 
Sbjct: 307 RYMRQVGFDQVHT-TTPTLLDDGR-VVYTRWDYNDRGQVWAQPLFQMNPDGTG-----QA 359

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDT 414
                 +W P   ++  +R+  G  
Sbjct: 360 EYYGMNSWFP--TTVAHTRQIPGTR 382


>gi|311742227|ref|ZP_07716037.1| WD40 domain protein [Aeromicrobium marinum DSM 15272]
 gi|311314720|gb|EFQ84627.1| WD40 domain protein [Aeromicrobium marinum DSM 15272]
          Length = 631

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 80/252 (31%), Gaps = 54/252 (21%)

Query: 211 DQILFEPRFSPNQQKVAYATY-------DDEDILRVYLMDTRIDRAPKRIGNFRSMILA- 262
           D    +P  S + + VA+++        D  D   V+L D       +    F    L  
Sbjct: 293 DGSSRQPAISADGRFVAFSSSASNLVPNDTNDRGDVFLWDRSTRETMRVSDTFDGSQLDN 352

Query: 263 ----PRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERL---TNTLFINIS- 306
               P  S++G+                +   DI+  D +S  TE +   T     ++S 
Sbjct: 353 DAYQPAISADGRFVAFGSDASNLVPDDTNGQADIFVWDAESGLTELVSVSTEGAQSDLSS 412

Query: 307 --ASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQDKEASYFD----- 351
              + S D   + FE+        D      ++          RIS+    +  D     
Sbjct: 413 EHPAISADGRHVTFEARATNLVEGDTNAALDVFERDRQTDTTTRISEGSGGADGDGESGL 472

Query: 352 PVWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERL-------LVEDSNLQAPT 396
           P  S  G  +A+   +         +   + V  +      L       L  D++  AP+
Sbjct: 473 PAISADGRYVAYESHATNLVAGDANDSKDVFVWDRQTGTTALVSVGAGGLQGDADSSAPS 532

Query: 397 WSPSGRSLIFSR 408
            S  GR + F  
Sbjct: 533 VSADGRYVAFDS 544



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 79/271 (29%), Gaps = 59/271 (21%)

Query: 211 DQILFEPRFSPNQQKVAYATY-------DDEDILRVYLMDTRIDRAPKRIGNFRSMIL-- 261
           D   ++P  S + + VA+ +        D      +++ D           +        
Sbjct: 351 DNDAYQPAISADGRFVAFGSDASNLVPDDTNGQADIFVWDAESGLTELVSVSTEGAQSDL 410

Query: 262 ---APRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTLFINIS---- 306
               P  S++G+      +         + A+D++  D Q++ T R++            
Sbjct: 411 SSEHPAISADGRHVTFEARATNLVEGDTNAALDVFERDRQTDTTTRISEGSGGADGDGES 470

Query: 307 --ASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQD-----KEASYFD 351
              + S D   + +ES        D    + ++V          +S        +A    
Sbjct: 471 GLPAISADGRYVAYESHATNLVAGDANDSKDVFVWDRQTGTTALVSVGAGGLQGDADSSA 530

Query: 352 PVWSPQGDLIAF--------TKFSGEKFAIGVMKKDGSQERLLVED-------SNLQAPT 396
           P  S  G  +AF            G +  + +         ++               P 
Sbjct: 531 PSVSADGRYVAFDSLTSNLVASTGGVQGDVFLRDLQEGTITVVSTSVSGLRGNGASTGPA 590

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            S  GR + ++        S L S D N R 
Sbjct: 591 ISADGRIIAYTS-----AASNLVSGDTNMRR 616



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 79/256 (30%), Gaps = 54/256 (21%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATY-------DDEDILRVYLMDTRIDRAPKR-----IGN 255
              D+    P  S + + V Y +        D  + + +YL D       +         
Sbjct: 232 TQGDERSENPAVSADGRYVVYESRATTLGPGDTSEDVDIYLSDRVSGSTSRISVAADGTE 291

Query: 256 FRSMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTLF----- 302
                  P  S++G+    S           ++  D++  D  +  T R+++T       
Sbjct: 292 ADGSSRQPAISADGRFVAFSSSASNLVPNDTNDRGDVFLWDRSTRETMRVSDTFDGSQLD 351

Query: 303 -INISASYSPDSSQIVFESDRE--------GKEQLYVMQSNGSDQKRISQDKEASYFD-- 351
                 + S D   + F SD          G+  ++V  +     + +S   E +  D  
Sbjct: 352 NDAYQPAISADGRFVAFGSDASNLVPDDTNGQADIFVWDAESGLTELVSVSTEGAQSDLS 411

Query: 352 ---PVWSPQGDLIAFTKFS------GEKFAIGVMKKDGSQERLLV-------EDSNLQA- 394
              P  S  G  + F   +          A+ V ++D   +            D + ++ 
Sbjct: 412 SEHPAISADGRHVTFEARATNLVEGDTNAALDVFERDRQTDTTTRISEGSGGADGDGESG 471

Query: 395 -PTWSPSGRSLIFSRK 409
            P  S  GR + +   
Sbjct: 472 LPAISADGRYVAYESH 487



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 78/254 (30%), Gaps = 45/254 (17%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSG-IIKNSLCVMDRDGANIRYLTPS-----R 210
            + +D YQ      G F +     S  V      +  + V D +      ++ S      
Sbjct: 349 QLDNDAYQPAISADGRFVAFGSDASNLVPDDTNGQADIFVWDAESGLTELVSVSTEGAQS 408

Query: 211 DQILFEPRFSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKR-----IGNFRS 258
           D     P  S + + V +          D    L V+  D + D   +        +   
Sbjct: 409 DLSSEHPAISADGRHVTFEARATNLVEGDTNAALDVFERDRQTDTTTRISEGSGGADGDG 468

Query: 259 MILAPRFSSNGKRALI--------SVQKDEAMDIYSVDLQSNATERLT------NTLFIN 304
               P  S++G+            +   +++ D++  D Q+  T  ++           +
Sbjct: 469 ESGLPAISADGRYVAYESHATNLVAGDANDSKDVFVWDRQTGTTALVSVGAGGLQGDADS 528

Query: 305 ISASYSPDSSQIVFES-------DREGKEQ-LYVMQSNGSDQKRISQ-----DKEASYFD 351
            + S S D   + F+S          G +  +++          +S          +   
Sbjct: 529 SAPSVSADGRYVAFDSLTSNLVASTGGVQGDVFLRDLQEGTITVVSTSVSGLRGNGASTG 588

Query: 352 PVWSPQGDLIAFTK 365
           P  S  G +IA+T 
Sbjct: 589 PAISADGRIIAYTS 602



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 50/156 (32%), Gaps = 33/156 (21%)

Query: 298 TNTLFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRIS-----QD 344
           T     + + + S D   +V+ES        D      +Y+         RIS      +
Sbjct: 232 TQGDERSENPAVSADGRYVVYESRATTLGPGDTSEDVDIYLSDRVSGSTSRISVAADGTE 291

Query: 345 KEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVEDSN----- 391
            + S   P  S  G  +AF+          + ++  + +  +   +   + +  +     
Sbjct: 292 ADGSSRQPAISADGRFVAFSSSASNLVPNDTNDRGDVFLWDRSTRETMRVSDTFDGSQLD 351

Query: 392 --LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                P  S  GR + F     G   S L   D NG
Sbjct: 352 NDAYQPAISADGRFVAF-----GSDASNLVPDDTNG 382


>gi|239618185|ref|YP_002941507.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kosmotoga olearia TBF 19.5.1]
 gi|239507016|gb|ACR80503.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kosmotoga olearia TBF 19.5.1]
          Length = 651

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 53/333 (15%), Positives = 114/333 (34%), Gaps = 62/333 (18%)

Query: 161 DIYQSITGEKGDFNS---RILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILF 215
           D+Y+ ++    +F     + +FV + +     K    + +MD  G N R LT  +     
Sbjct: 8   DLYRYVSLGNIEFLPEGKKFIFVRKRMDKKQNKYYSDIWIMDVSGRNRRQLTFGK--FDS 65

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-------------NFRSMILA 262
            P+ SP+ + +A+ +  ++D     L    +D    ++              +   +   
Sbjct: 66  SPKISPDGKLLAFTSKREKDSQGTELYILPLDGGESKLVKTIEGGVQSLEWIDNTKLAFV 125

Query: 263 PRFSSNGK--------RALISVQK------------DEAMDIYSVDLQSNATERLTNTLF 302
                +GK        + +  +++                  + +D+ S   ERLT    
Sbjct: 126 SAVRPDGKAPEKEPPEKKVYEIERIPFLGNGAGFTDGRYGHAFLLDINSGKLERLTEGET 185

Query: 303 INISASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                S SPD  ++          R     LYV+     D+ R+  + + S     W   
Sbjct: 186 HVRGVSPSPDGRKLAVVMLDNPEQRPIWASLYVIDLKTRDRIRL-FNDKVSVMYAEWKDN 244

Query: 358 GDLIAFTKFSGEKF----AIGVMKKDGSQERLLVEDSNLQAPTWSPS-----GRSL---- 404
            +L A      + F     + + +    + R + +       + +       GR +    
Sbjct: 245 DNLYALITDFKKGFATNPKVAIARVPTKRTRTIFDGDLSFFNSLNSDVRGVGGRQIRVHN 304

Query: 405 --IFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
             ++    DG   + + S+D  G+  T+++  A
Sbjct: 305 GSLYFITTDGPK-AVIKSVDNKGKLSTVLDVNA 336



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 8/107 (7%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           +  S  +  + P+G    F +   +K        I +M   G   R L       +P  S
Sbjct: 11  RYVSLGNIEFLPEGKKFIFVRKRMDKKQNKYYSDIWIMDVSGRNRRQLTFGKFDSSPKIS 70

Query: 399 PSGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLINT-PAYASDPQWV 443
           P G+ L F+ K++ D+ G++LY + L+G    L+ T        +W+
Sbjct: 71  PDGKLLAFTSKREKDSQGTELYILPLDGGESKLVKTIEGGVQSLEWI 117


>gi|220912370|ref|YP_002487679.1| peptidase S41 [Arthrobacter chlorophenolicus A6]
 gi|219859248|gb|ACL39590.1| peptidase S41 [Arthrobacter chlorophenolicus A6]
          Length = 1181

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 66/193 (34%), Gaps = 23/193 (11%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G       + D    ++   L      R+++      +  ++PD  ++V+   +    ++
Sbjct: 14  GDLVTFVAEDD----VWIAPLDGGRAWRVSSLQLPARNPRFTPDGKKLVWTVIQGTAPEV 69

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI---AFTKFSGEKFAIGVMKKDGSQERL 385
                +G   ++++    ++     ++  G ++   AF +          +  +G     
Sbjct: 70  VSADVDGGGYRQLTYFGHSTTRVKGFTAGGAVVVTSAFRQAESRHTHAYSVPLEGGWAEE 129

Query: 386 LVEDSNLQAPTWSP---SGRSLI-----------FSRKKDGDTGSKLYSIDLNGRNETLI 431
           L     +++  + P     R ++           + R + G  G      D NG  E L+
Sbjct: 130 LPFGP-VESVAFGPEVGDERPVVVASVLSREPAWWKRYRGGTAGKLWIDTDGNGEFERLL 188

Query: 432 N-TPAYASDPQWV 443
                  +DP WV
Sbjct: 189 PELEGNFADPLWV 201



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 89/266 (33%), Gaps = 31/266 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + +   DG    +   S       PRF+P+ +K+ +          V   D       +
Sbjct: 24  DVWIAPLDGGRA-WRVSSLQLPARNPRFTPDGKKLVWTVI-QGTAPEVVSADVDGGGYRQ 81

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTNTLFINISAS 308
                 S      F++ G   + S  +         YSV L+    E L      ++  +
Sbjct: 82  LTYFGHSTTRVKGFTAGGAVVVTSAFRQAESRHTHAYSVPLEGGWAEELPFGPVESV--A 139

Query: 309 YSP---DSSQIVFES-----------DREGKEQLYVMQSNG-SDQKRISQDKEASYFDPV 353
           + P   D   +V  S            R G      + ++G  + +R+  + E ++ DP+
Sbjct: 140 FGPEVGDERPVVVASVLSREPAWWKRYRGGTAGKLWIDTDGNGEFERLLPELEGNFADPL 199

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           W   G  +AF         +  +  +G   R   +  +      +  G  +IF      +
Sbjct: 200 WV-DGR-VAFLSDHEGYGNLYSVLPNGKDLRRHTDHEDFYVRHAATDGSRVIF------E 251

Query: 414 TGSKLYSI-DLNGRNETLINTPAYAS 438
           +  +L+ + DL      L  T   AS
Sbjct: 252 SAGELWVLKDLGSEAVRLDITLGSAS 277



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 9/121 (7%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---- 365
           SPD   +   +       +YV  +   +  R++   E +  D  WS     + +++    
Sbjct: 476 SPDGRWLALGTSFG---DVYVADAASGELTRVTSIGEGTISDLAWSGDSAWLVWSEPVTS 532

Query: 366 -FSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S  +     +   GS    + +      +P ++P G+ L F   +  D     +S DL
Sbjct: 533 FGSRSRLRAANIAAAGSDPVEVTDGRFCDRSPAFTPDGKYLAFLSNRSFDPVYDGHSFDL 592

Query: 424 N 424
           +
Sbjct: 593 S 593



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 9/109 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---V 276
           SP+ + +A  T        VY+ D       +        I    +S +    + S    
Sbjct: 476 SPDGRWLALGT----SFGDVYVADAASGELTRVTSIGEGTISDLAWSGDSAWLVWSEPVT 531

Query: 277 QKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSPDSSQIVFESDRE 323
                  + + ++    +    +T+  F + S +++PD   + F S+R 
Sbjct: 532 SFGSRSRLRAANIAAAGSDPVEVTDGRFCDRSPAFTPDGKYLAFLSNRS 580



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 82/249 (32%), Gaps = 31/249 (12%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY----ATYDDEDILRVYLM 242
           G     + V D     +  +T   +  + +  +S +   + +     ++     LR   +
Sbjct: 485 GTSFGDVYVADAASGELTRVTSIGEGTISDLAWSGDSAWLVWSEPVTSFGSRSRLRAANI 544

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQS-NATERLTN 299
                  P  + + R    +P F+ +GK       +  D   D +S DL   +  +    
Sbjct: 545 A-AAGSDPVEVTDGRFCDRSPAFTPDGKYLAFLSNRSFDPVYDGHSFDLSFPSPIKPYLV 603

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            L     + + PD +     +D  G +       +G    R+  +  A     V  PQG+
Sbjct: 604 ALAAGTPSPFGPDVAPGA--TDTGGSDAADAGAPDGPAPVRVDPEGLAHRVIGVPVPQGN 661

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
              +T  S  K A+  +    S                   G+    + ++D DT   L 
Sbjct: 662 ---YTGLSATKGALLWLDAALSGVT--------------GDGK----ASQEDKDTRPSLV 700

Query: 420 SIDLNGRNE 428
             DL  R +
Sbjct: 701 RYDLGRRKQ 709



 Score = 36.9 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 16/104 (15%), Positives = 36/104 (34%), Gaps = 15/104 (14%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFS---RK 409
           SP G  +A     G+   + V      +   +    +  +    WS     L++S     
Sbjct: 476 SPDGRWLALGTSFGD---VYVADAASGELTRVTSIGEGTISDLAWSGDSAWLVWSEPVTS 532

Query: 410 KDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQWVGFM 446
               +  +  +I   G +   +        +PA+  D +++ F+
Sbjct: 533 FGSRSRLRAANIAAAGSDPVEVTDGRFCDRSPAFTPDGKYLAFL 576


>gi|217973541|ref|YP_002358292.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Shewanella baltica OS223]
 gi|217498676|gb|ACK46869.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella baltica OS223]
          Length = 683

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 84/291 (28%), Gaps = 67/291 (23%)

Query: 218 RFSPNQQKVAY----ATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             S +  K+ Y         E    +YL+D T     P ++ +         F+++ K  
Sbjct: 42  TVSHDGTKLVYGLKTVNDKGEGSSDLYLLDLTDTKAKPLQLTSAAGTEHDVSFATDDKSI 101

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------------- 317
                +  +  ++ + L      ++++          S D  Q+V               
Sbjct: 102 YFLAGRSGSSQLFQLPLTGGEAVQVSDLPLDIDGYKLSNDGKQVVLSMRVFPECKDLACS 161

Query: 318 ---FESDREGK----------------------EQLYVMQSNGSDQKRISQDKEASYFDP 352
              F ++ E K                        L+V   +G    ++    +    + 
Sbjct: 162 KDKFTAESERKSTGREYKQLMVRHWDTWEDHARSHLFVGAVSGEKLTKVVDVTQGLDTET 221

Query: 353 -----------VWSPQGDLIAFTKFSG-------EKFAIGVMKKDGSQERLLVEDSNLQA 394
                       ++P G  + ++  +          + +  +   G     L +D+    
Sbjct: 222 PPKPFSGMEEVTFTPDGKFVVYSAKAPSKDQAWTTNYDLWQVPVTGGAATNLTKDNLAWD 281

Query: 395 --PTWSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNETLINTPAYASDPQ 441
             PT+S  GR + +   K     +  Y I L      +T    P +   P 
Sbjct: 282 AQPTFSSDGRYMAYLAMKKPGFEADRYGIMLRDTTTGQTKEVAPLWDRSPS 332



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 111/322 (34%), Gaps = 38/322 (11%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           LV G      K     +  L D+ D K     +  S+  +   ++    D     + G  
Sbjct: 50  LVYGLKTVNDKGEGSSDLYLLDLTDTKAKP-LQLTSAAGTEHDVSFATDDKSIYFLAGRS 108

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA--- 227
           G  +S++  +  +    +  + L  +D DG     L+    Q++   R  P  + +A   
Sbjct: 109 G--SSQLFQLPLTGGEAVQVSDL-PLDIDGY---KLSNDGKQVVLSMRVFPECKDLACSK 162

Query: 228 --YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             +    +            +        + RS +     S  G++    V   + +D  
Sbjct: 163 DKFTAESERKSTGREYKQLMVRHWDTWEDHARSHLFVGAVS--GEKLTKVVDVTQGLDTE 220

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQ 338
           +     +  E +T          ++PD   +V+ +    K+Q +    +       G   
Sbjct: 221 TPPKPFSGMEEVT----------FTPDGKFVVYSAKAPSKDQAWTTNYDLWQVPVTGGAA 270

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERL-LVEDSNLQA 394
             +++D  A    P +S  G  +A+       F     G+M +D +  +   V     ++
Sbjct: 271 TNLTKDNLAWDAQPTFSSDGRYMAYLAMKKPGFEADRYGIMLRDTTTGQTKEVAPLWDRS 330

Query: 395 PT---WSPSGRSLIFSRKKDGD 413
           P+   ++P  R+L  + +  G 
Sbjct: 331 PSSLMFAPDNRTLYVTAQDIGQ 352



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 62/184 (33%), Gaps = 8/184 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G F            +      L  +   G     LT        +P FS + 
Sbjct: 231 EVTFTPDGKFVVYSAKAPSKDQAWTTNYDLWQVPVTGGAATNLTKDNLAWDAQPTFSSDG 290

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D   + L DT   +  +    +     +  F+ + +   ++ Q  
Sbjct: 291 RYMAYLAMKKPGFEADRYGIMLRDTTTGQTKEVAPLWDRSPSSLMFAPDNRTLYVTAQDI 350

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
             + I+ V+ Q      +        ++  +  + +++F+S    +   LY + ++G   
Sbjct: 351 GQVSIFQVNTQFGDVRSI---YSDGTNSLIAVTNDELIFDSKTLVEPGDLYSITTDGQGL 407

Query: 339 KRIS 342
           KR++
Sbjct: 408 KRLT 411


>gi|163848699|ref|YP_001636743.1| WD-40 repeat-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222526641|ref|YP_002571112.1| WD-40 repeat-containing protein [Chloroflexus sp. Y-400-fl]
 gi|163669988|gb|ABY36354.1| WD-40 repeat protein [Chloroflexus aurantiacus J-10-fl]
 gi|222450520|gb|ACM54786.1| WD-40 repeat protein [Chloroflexus sp. Y-400-fl]
          Length = 349

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 47/216 (21%), Positives = 78/216 (36%), Gaps = 37/216 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS---MILAPRFSSNGKRALI 274
            FSP+   +A + +       V L D    R    I         I+A  FS +GK  ++
Sbjct: 129 AFSPDGSILAVSEFHHSRGQEVQLWDVMNQRQIDSILLADPDAATIIALAFSPDGKHLVV 188

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQIVF------ESDREG 324
                    ++ VD+      + T +  I    S    +SPD S++V         D   
Sbjct: 189 ----GTDASVWLVDVA-----QRTVSRQIQPRPSGSIAFSPDGSRLVLGGKFIHVYDTAT 239

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIA------------FTKFSGEKF 371
            +  Y +   G  ++R  Q+  A+   P   SP G  +A            F +    + 
Sbjct: 240 WQLAYRISFPGEKEERSPQEFIAARKMPVAISPDGRWLATPNRPPPGDSFSFFEPGPPRQ 299

Query: 372 AIGVMKK-DGSQERLLVEDS-NLQAPTWSPSGRSLI 405
            I +    DG ++R+L      L    +SP G  L+
Sbjct: 300 TIALRNPADGRRKRILSGSPIRLNILMFSPDGEWLL 335


>gi|220908852|ref|YP_002484163.1| WD-40 repeat-containing protein [Cyanothece sp. PCC 7425]
 gi|219865463|gb|ACL45802.1| WD-40 repeat protein [Cyanothece sp. PCC 7425]
          Length = 1208

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 88/242 (36%), Gaps = 30/242 (12%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----------- 234
            +G    ++ + DR    +          +    FSP+ Q +A    D +           
Sbjct: 786  TGSEDCTIKLWDRYTGELLKTLQGHQGSISGLAFSPDSQILASCAVDGKVKLWHIPSLEQ 845

Query: 235  --DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                         + +  + +  + + + A  FS +  + L S  +D  + ++  D  S 
Sbjct: 846  QTTPNSALTPGGYVGQCLQTLSGYTNAVWAVAFSPD-SQILASCGEDNCIRLW--DASSG 902

Query: 293  A-TERLTNTLFINISASYSPDS-------SQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
               + L     +  S +++P          QI+  S  +G ++L+         K IS  
Sbjct: 903  EHLQSLAGHTGVIWSVNFAPSPHATRDLEGQILASSSLDGTQRLW--DLKTGRSKIIST- 959

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRS 403
                Y  PV+SP G ++A  +       + V    G   + L  + ++  A ++SP+G+ 
Sbjct: 960  GLHFYRTPVFSPDGKVLAIREAENSIALLRV--TAGELHKSLSAELDIHFAASFSPNGQV 1017

Query: 404  LI 405
            L 
Sbjct: 1018 LA 1019



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/320 (15%), Positives = 114/320 (35%), Gaps = 34/320 (10%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G++I  G +   +  +LWD    + +  K       S   +A +    I  S      D 
Sbjct: 781  GQIIATGSEDCTI--KLWDRYTGELL--KTLQGHQGSISGLAFSPDSQILASCAV---DG 833

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
              ++  +          ++L      G  ++ L+      ++   FSP+ Q +A    D+
Sbjct: 834  KVKLWHIPSLEQQTTPNSALTPGGYVGQCLQTLS-GYTNAVWAVAFSPDSQILASCGEDN 892

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--------GKRALISVQKDEAMDIY 285
                 + L D       + +     +I +  F+ +        G + L S   D    ++
Sbjct: 893  ----CIRLWDASSGEHLQSLAGHTGVIWSVNFAPSPHATRDLEG-QILASSSLDGTQRLW 947

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
              DL++  ++ ++  L    +  +SPD   +     RE +  + +++    +  +    +
Sbjct: 948  --DLKTGRSKIISTGLHFYRTPVFSPDGKVLA---IREAENSIALLRVTAGELHKSLSAE 1002

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRS 403
               +F   +SP G ++A    +    A+ + +    +   +     + +    + P GR 
Sbjct: 1003 LDIHFAASFSPNGQVLACNCVNS---AVRLWQVSTGECCQVFQGHTAAIGTLAFEPGGRR 1059

Query: 404  LIFSRKKDGDTGSKLYSIDL 423
            L        D   KL+ I  
Sbjct: 1060 LATGSH---DGTIKLWDIST 1076



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/303 (12%), Positives = 93/303 (30%), Gaps = 54/303 (17%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            +LWD+++   +   +            H  SD ++  +           + +S S    
Sbjct: 704 IKLWDLENGSCLHTLE-----------GH--SDQVWSIVFAPSPVNPQESIVISAS---- 746

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               ++   +              Q +     SP  Q +A  + D      + L D    
Sbjct: 747 -HDRTIKFWNLTTGECSRTLKGHAQKIPYLALSPGGQIIATGSED----CTIKLWDRYTG 801

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD------------LQSNATE 295
              K +   +  I    FS +  + L S   D  + ++ +                    
Sbjct: 802 ELLKTLQGHQGSISGLAFSPD-SQILASCAVDGKVKLWHIPSLEQQTTPNSALTPGGYVG 860

Query: 296 RLTNTLFINISASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           +   TL    +A +    SPDS  +    +      + +  ++  +  +         + 
Sbjct: 861 QCLQTLSGYTNAVWAVAFSPDSQILASCGE---DNCIRLWDASSGEHLQSLAGHTGVIWS 917

Query: 352 PVWSP--------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGR 402
             ++P        +G ++A +   G +    +      + +++    +  + P +SP G+
Sbjct: 918 VNFAPSPHATRDLEGQILASSSLDGTQ---RLWDLKTGRSKIISTGLHFYRTPVFSPDGK 974

Query: 403 SLI 405
            L 
Sbjct: 975 VLA 977



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 70/191 (36%), Gaps = 22/191 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A A  D E    V + +    +    + +    + A  FS +GK    S  
Sbjct: 562 TFSPDGKLIATAASDGE----VAVWEVATGKKLLSLAS-PGWVNAVTFSPDGKYLA-SNH 615

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + I+  D+++    + L  +  I     +S D   +++ S       + +      
Sbjct: 616 SDCTLKIW--DIENQRCYQSLQESNLIFREVFFSIDGHTLLYGSLSGP---INIWDWQTG 670

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +  R  Q      +    +P+   +A    +G+   I +   +       +E  + Q   
Sbjct: 671 ECLRSFQIPTQGVWSIALNPESKTLA---CAGDNGTIKLWDLENGSCLHTLEGHSDQ--V 725

Query: 397 WSPSGRSLIFS 407
           WS     ++F+
Sbjct: 726 WS-----IVFA 731



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 5/81 (6%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           +  +K A      +SP G LIA     GE     V    G +   L     + A T+SP 
Sbjct: 550 LFTEKLAITIAVTFSPDGKLIATAASDGEVAVWEV--ATGKKLLSLASPGWVNAVTFSPD 607

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
           G+ L        D   K++ I
Sbjct: 608 GKYLA---SNHSDCTLKIWDI 625



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 63/212 (29%), Gaps = 25/212 (11%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + L+ +    +    FSP+ + +A    D      + + D    R  + +     +    
Sbjct: 589 KLLSLASPGWVNAVTFSPDGKYLASNHSD----CTLKIWDIENQRCYQSLQESNLIFREV 644

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS----PDSSQIVFE 319
            FS +G   L        ++I+  D Q+    R   +  I     +S    P+S  +   
Sbjct: 645 FFSIDGHTLLY-GSLSGPINIW--DWQTGECLR---SFQIPTQGVWSIALNPESKTLACA 698

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG----DLIAFTKFSGEKFAIGV 375
            D      + +            +      +  V++P      + I  +           
Sbjct: 699 GD---NGTIKLWDLENGSCLHTLEGHSDQVWSIVFAPSPVNPQESIVISASHDRTIKFW- 754

Query: 376 MKKDGSQERLLVEDSNLQAP--TWSPSGRSLI 405
                 +    ++    + P    SP G+ + 
Sbjct: 755 -NLTTGECSRTLKGHAQKIPYLALSPGGQIIA 785


>gi|149908991|ref|ZP_01897650.1| hypothetical protein PE36_19085 [Moritella sp. PE36]
 gi|149808002|gb|EDM67945.1| hypothetical protein PE36_19085 [Moritella sp. PE36]
          Length = 416

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 74/233 (31%), Gaps = 46/233 (19%)

Query: 254 GNFRSMILAPRFSSNGKRALISV--------QKDEAMDIYSVDLQSNATERLT------N 299
           G   +    P  S+N +    +           +E  DI+  D  S  TER++       
Sbjct: 26  GKGNADSFEPTISANSRYVAFTSLSNNLVSDDTNETADIFVYDRNSGITERVSIASDGSQ 85

Query: 300 TLFINISASYSPDSSQIVFESDREG--------KEQLYVMQSNGSDQKRISQDKEASYFD 351
               +   S S D   + F +D           ++ ++V        + +S D + S  +
Sbjct: 86  ADAGSYKPSISADGRYVAFIADASNLVDDDTNNEKDVFVHDRVTGSTELVSIDSDGSQGN 145

Query: 352 P-----VWSPQGDLIAFTKFSGE--------KFAIGVMKKDGSQERLLV-----EDSNLQ 393
                   S  G  +AFT  S          K  + V  +D      +         +  
Sbjct: 146 FDSDQVAISADGRYVAFTSLSDNLVLNDTNMKADVFVHDRDRGITERISVSSSGSQGDGY 205

Query: 394 APTWSPSGRSLIFSRKK------DGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            P  S  GR + F+         D +  + ++  D N R   L++  +  S  
Sbjct: 206 HPAISADGRYVTFAADTSHLILNDTNMKADIFVHDRNSRTTELVSIASDGSQG 258



 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 78/255 (30%), Gaps = 52/255 (20%)

Query: 210 RDQILFEPRFSPNQQKVAYATY-------DDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +   FEP  S N + VA+ +        D  +   +++ D       +           
Sbjct: 28  GNADSFEPTISANSRYVAFTSLSNNLVSDDTNETADIFVYDRNSGITERVSIASDGSQAD 87

Query: 263 -----PRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLT------NTLFI 303
                P  S++G+                +   D++  D  + +TE ++         F 
Sbjct: 88  AGSYKPSISADGRYVAFIADASNLVDDDTNNEKDVFVHDRVTGSTELVSIDSDGSQGNFD 147

Query: 304 NISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRIS---QDKEASYFDP 352
           +   + S D   + F S        D   K  ++V   +    +RIS      +   + P
Sbjct: 148 SDQVAISADGRYVAFTSLSDNLVLNDTNMKADVFVHDRDRGITERISVSSSGSQGDGYHP 207

Query: 353 VWSPQGDLIAFT--------KFSGEKFAIGVMKKDGSQERLLV-------EDSNLQAPTW 397
             S  G  + F           +  K  I V  ++     L+         +S+   P  
Sbjct: 208 AISADGRYVTFAADTSHLILNDTNMKADIFVHDRNSRTTELVSIASDGSQGNSDSLFPAI 267

Query: 398 SPSGRSLIFSRKKDG 412
           S  GR + F    + 
Sbjct: 268 SADGRYVAFDSSANN 282



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 86/284 (30%), Gaps = 62/284 (21%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--- 234
           +FV + V        L  +D DG+   +     DQ+      S + + VA+ +  D    
Sbjct: 122 VFVHDRVTG---STELVSIDSDGSQGNF---DSDQV----AISADGRYVAFTSLSDNLVL 171

Query: 235 ---DILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISVQK--------D 279
              ++     +  R     +RI       +     P  S++G+    +           +
Sbjct: 172 NDTNMKADVFVHDRDRGITERISVSSSGSQGDGYHPAISADGRYVTFAADTSHLILNDTN 231

Query: 280 EAMDIYSVDLQSNATERLT------NTLFINISASYSPDSSQIVFES--------DREGK 325
              DI+  D  S  TE ++           ++  + S D   + F+S        D    
Sbjct: 232 MKADIFVHDRNSRTTELVSIASDGSQGNSDSLFPAISADGRYVAFDSSANNLVPEDTNAA 291

Query: 326 EQLYVMQSNGSDQKRISQDKEAS-----YFDPVWSPQGDLIA-------FTKFSGEKFA- 372
           + ++V          +S   + S           S  G+ +        F       F+ 
Sbjct: 292 KDVFVHDRKTGLTALVSIAMDGSQGDDDSSISSISGDGNYVVFQSLASTFISHDDNDFSD 351

Query: 373 -------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                  +G+             + +   P  S  GR ++F  +
Sbjct: 352 VFIHHRYVGITDLVSVSSYGGQANEHSYRPAISADGRYVVFQSQ 395


>gi|282165101|ref|YP_003357486.1| hypothetical protein MCP_2431 [Methanocella paludicola SANAE]
 gi|282157415|dbj|BAI62503.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 385

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 19/161 (11%)

Query: 269 GKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           G + + +V      DIY +DL   + A  ++++    N  A        +V+ SD EGK+
Sbjct: 237 GDKLVYTVVSGTGSDIYLLDLSWKTPAARKISSGTGNNNHARIY--DHTVVYHSDMEGKD 294

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +Y+   N       + + +       W+     + + +       + I     +   ER
Sbjct: 295 HIYIYDINTGTTNCPTHEGQQ------WNADIYDNTLVYDDNRNGNWDIYAYDLNTHVER 348

Query: 385 LLVEDSNLQAPTWSP--SGRSLIFSRKKDGDTGSKLYSIDL 423
            +  + N Q    +P   G  + +   +DG   S +Y++ +
Sbjct: 349 RITNEPNDQR---APVLYGSRIAYLDNRDG--YSAIYTMSI 384



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 8/111 (7%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   V ++  + +D + +Y ++T     P   G   +  +           +    ++  
Sbjct: 281 DHTVVYHSDMEGKDHIYIYDINTGTTNCPTHEGQQWNADIY------DNTLVYDDNRNGN 334

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            DIY+ DL ++   R+TN      +       S+I +  +R+G   +Y M 
Sbjct: 335 WDIYAYDLNTHVERRITNEPNDQRAPVLY--GSRIAYLDNRDGYSAIYTMS 383


>gi|271965013|ref|YP_003339209.1| dipeptidylaminopeptidase/acylaminoacyl-peptidase -like protein
           [Streptosporangium roseum DSM 43021]
 gi|270508188|gb|ACZ86466.1| Dipeptidylaminopeptidase/acylaminoacyl-peptidase -like protein
           [Streptosporangium roseum DSM 43021]
          Length = 649

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 48/127 (37%), Gaps = 12/127 (9%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + +PD+S + F SDR+G  ++++       +            D  WSP G  +A    
Sbjct: 25  PALAPDASAVAFVSDRDGSPRVWIRPLGREAESWPVDTGPEPAADVSWSPDGGRLAVLVV 84

Query: 367 SGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            G      +  ++ DG   R L           SP+G S  F R     +   +  +   
Sbjct: 85  PGGGEHTQVWTVRPDGGDLRPLA----------SPAGGSASFVRWTGRGSILLVAEVSAA 134

Query: 425 GRNETLI 431
           GR E ++
Sbjct: 135 GRTEAVL 141



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 63/174 (36%), Gaps = 20/174 (11%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA------SYSPDSS 314
             P  + +         +D +  ++   L     E    +  ++         S+SPD  
Sbjct: 23  WTPALAPDASAVAFVSDRDGSPRVWIRPL-GREAE----SWPVDTGPEPAADVSWSPDGG 77

Query: 315 QIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEK 370
           ++       G E  Q++ ++ +G D + ++     S     W+ +G   L+A    +G  
Sbjct: 78  RLAVLVVPGGGEHTQVWTVRPDGGDLRPLASPAGGSASFVRWTGRGSILLVAEVSAAGRT 137

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYSIDL 423
            A+ ++        ++   + +     S   GR L+   ++      ++Y  DL
Sbjct: 138 EAV-LIDAHTGGREVVAAGALMHPVAMSRDQGRMLL---RRGPRGVRRMYVADL 187



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 2/99 (2%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSP 399
           +     + + P  +P    +AF         + +       E   V+     A   +WSP
Sbjct: 15  TGPAAWNCWTPALAPDASAVAFVSDRDGSPRVWIRPLGREAESWPVDTGPEPAADVSWSP 74

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            G  L       G   ++++++  +G +   + +PA  S
Sbjct: 75  DGGRLAVLVVPGGGEHTQVWTVRPDGGDLRPLASPAGGS 113



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 54/169 (31%), Gaps = 7/169 (4%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            + P  +P+   VA+ +  D    RV++     +     +           +S +G R  
Sbjct: 22  CWTPALAPDASAVAFVSDRDGSP-RVWIRPLGREAESWPVDTGPEPAADVSWSPDGGRLA 80

Query: 274 ISVQKDEA--MDIYSVDLQSNATERLTNTLFINISA-SYSPDSS-QIVFESDREGKEQLY 329
           + V         +++V         L +    + S   ++   S  +V E    G+ +  
Sbjct: 81  VLVVPGGGEHTQVWTVRPDGGDLRPLASPAGGSASFVRWTGRGSILLVAEVSAAGRTEAV 140

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           ++ ++   ++ ++    A       S     +   +       + V   
Sbjct: 141 LIDAHTGGREVVAAG--ALMHPVAMSRDQGRMLLRRGPRGVRRMYVADL 187



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 37/307 (12%), Positives = 67/307 (21%), Gaps = 53/307 (17%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V  G     +  +  DG ++R L           R++     +  A           L+D
Sbjct: 84  VPGGGEHTQVWTVRPDGGDLRPLASPAGGSASFVRWTGRGSILLVAEVSAAGRTEAVLID 143

Query: 244 TRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSN---------- 292
                           ++ P   S +  R L+         +Y  DL +           
Sbjct: 144 AHTGGREVVAA---GALMHPVAMSRDQGRMLLRRGPRGVRRMYVADLPAGLPGDLADLPP 200

Query: 293 -----------------------------------ATERLTNT-LFINISASYSPDSSQI 316
                                                  L           + SPD    
Sbjct: 201 GLPSGLPGALPPSLPSGLPGGLPPGLRGGAVGGPGGERPLLAGLPGSTDQGALSPDGMTA 260

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              SD        V      +   +++  +A       S  G           +  + V+
Sbjct: 261 YLLSDAGRDRAALVAVRGDGEAVVLAERPDAELDRFALSADGRRAVLLWNDRGRSELEVL 320

Query: 377 KKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           +      R L       + +   S  G   + + +  G     L   DL       +   
Sbjct: 321 ETGTGTLRPLPPPPAEVVSSVRMSLDGGQAVLAAEGPGHPSHVL-LCDLATGGYRQVAGA 379

Query: 435 AYASDPQ 441
                P 
Sbjct: 380 GPLGAPA 386



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 72/256 (28%), Gaps = 17/256 (6%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEP-----------RFSPNQQKVAYATYDDEDIL-RVYL 241
            V DRDG+   ++ P   +    P            +SP+  ++A           +V+ 
Sbjct: 36  FVSDRDGSPRVWIRPLGREAESWPVDTGPEPAADVSWSPDGGRLAVLVVPGGGEHTQVWT 95

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNT 300
           +                     R++  G   L++ V      +   +D  +   E +   
Sbjct: 96  VRPDGGDLRPLASPAGGSASFVRWTGRGSILLVAEVSAAGRTEAVLIDAHTGGREVVAAG 155

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             +    + S D  +++      G  ++YV          ++            +    L
Sbjct: 156 -ALMHPVAMSRDQGRMLLRRGPRGVRRMYVADLPAGLPGDLADLPPGLPSGLPGALPPSL 214

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +           G        ER L+     +      SP G    +     G   + L
Sbjct: 215 PSGLPGGLPPGLRGGAVGGPGGERPLLAGLPGSTDQGALSPDG-MTAYLLSDAGRDRAAL 273

Query: 419 YSIDLNGRNETLINTP 434
            ++  +G    L   P
Sbjct: 274 VAVRGDGEAVVLAERP 289


>gi|229818974|ref|YP_002880500.1| hypothetical protein Bcav_0475 [Beutenbergia cavernae DSM 12333]
 gi|229564887|gb|ACQ78738.1| conserved hypothetical protein [Beutenbergia cavernae DSM 12333]
          Length = 341

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 92/280 (32%), Gaps = 45/280 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++ + D +         SRD +   P ++P+   +           R+ ++D     AP+
Sbjct: 12  TVWIHDVETRERHRAWVSRDVLPEAPNWTPDGAHLV-----LNGGGRLLVIDAERAVAPE 66

Query: 252 RIG-------NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +            +      + +G+  + +  +D    +Y+V L   +  R++++    
Sbjct: 67  SVTPSPVDAAGLPPVNNDHVLAPDGRT-VFASAEDG--HLYAVPLAGGSARRVSSSRG-- 121

Query: 305 ISASY-------SPDSSQIVFE---SDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              ++       S D + + +       +G +  L+ M + G    +++ D        +
Sbjct: 122 --PTFTHYLHGVSSDGATLSYVGLERRADGVRTNLFTMPAAGGPSVQLTDDDFPDDGAEL 179

Query: 354 -WSPQGD-LIAFT---------KFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSG 401
                G   + F+         + +     +  M+ DG+    L  D      P  SP G
Sbjct: 180 GPGEDGTEWLWFSSERPLPGAPRRAPGHAQLFRMRPDGTGLEQLTHDERVNWFPHPSPGG 239

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             + +     G  G   +  D+      L+     A    
Sbjct: 240 TRVAYVSFPPGTLG---HPADVADVRIRLLPLSGRAPSGA 276



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/337 (14%), Positives = 104/337 (30%), Gaps = 57/337 (16%)

Query: 95  DSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
           D +P   +W   GA +++       G  RL V      +   + +  +    SP     +
Sbjct: 31  DVLPEAPNWTPDGAHLVL------NGGGRLLV------IDAERAVAPESVTPSPVDAAGL 78

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI- 213
               +D +           + R +F S           L  +   G + R ++ SR    
Sbjct: 79  PPVNNDHVLAP--------DGRTVFASAEDGH------LYAVPLAGGSARRVSSSRGPTF 124

Query: 214 -LFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSS--N 268
             +    S +   ++Y   +   D +R  L        P  ++ +              +
Sbjct: 125 THYLHGVSSDGATLSYVGLERRADGVRTNLFTMPAAGGPSVQLTDDDFPDDGAELGPGED 184

Query: 269 GK-RALISVQKD---------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           G      S ++              ++ +       E+LT+   +N     SP  +++ +
Sbjct: 185 GTEWLWFSSERPLPGAPRRAPGHAQLFRMRPDGTGLEQLTHDERVNWFPHPSPGGTRVAY 244

Query: 319 ESDREGK---------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            S   G           ++ ++  +G        D E        +P+   +   +  G 
Sbjct: 245 VSFPPGTLGHPADVADVRIRLLPLSGRAPSG--ADGELGSIREGMAPESTPV---RPPGG 299

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
               GV +      R+      +  P+W+P  R L +
Sbjct: 300 VDDDGVGRP-RDLARVFGGQGAMNVPSWAPDSRRLAY 335



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 76/227 (33%), Gaps = 32/227 (14%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +       V++ D       +   +   +  AP ++ +G   ++    +    +  +D +
Sbjct: 5   FAPGQTATVWIHDVETRERHRAWVSRDVLPEAPNWTPDGAHLVL----NGGGRLLVIDAE 60

Query: 291 SN-ATERLTNT-------LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
              A E +T +         +N     +PD    VF S  +G   LY +   G   +R+S
Sbjct: 61  RAVAPESVTPSPVDAAGLPPVNNDHVLAPDGRT-VFASAEDG--HLYAVPLAGGSARRVS 117

Query: 343 QDKEASYFD--PVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAP 395
             +  ++       S  G  +++     +  G +  +  M   G     L  +D      
Sbjct: 118 SSRGPTFTHYLHGVSSDGATLSYVGLERRADGVRTNLFTMPAAGGPSVQLTDDDFPDDGA 177

Query: 396 TWSP--SGR-SLIFSRKKD-------GDTGSKLYSIDLNGRNETLIN 432
              P   G   L FS ++            ++L+ +  +G     + 
Sbjct: 178 ELGPGEDGTEWLWFSSERPLPGAPRRAPGHAQLFRMRPDGTGLEQLT 224


>gi|254495565|ref|ZP_05108487.1| hypothetical protein LDG_0599 [Legionella drancourtii LLAP12]
 gi|254355135|gb|EET13748.1| hypothetical protein LDG_0599 [Legionella drancourtii LLAP12]
          Length = 624

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 89/279 (31%), Gaps = 38/279 (13%)

Query: 191 NSLCVMDRDGANIRYLTP-----SRDQILFEPRFSPNQQKVA-----YATYDDEDILRVY 240
             L +M  D    + L+         Q  F+  ++P+ +K+      Y  + ++      
Sbjct: 71  KQLWIMRADHTEEKQLSFVDVGLGHYQFTFDFVWAPDSKKLILEHQPYVPHWEKKPKPKS 130

Query: 241 LMDTR--IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--------MDIYSVDLQ 290
           ++D+        +++ +F + I    +       L   Q+  A          + +++ Q
Sbjct: 131 MIDSIDITTGQSRQLASFDASIFYLSWLPASNEVLFVKQRVGAEYNEEIDRDWVQALNTQ 190

Query: 291 SNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVM----------QSNGSDQ 338
             +   L     +   +    SPD  +I    D E       M           ++    
Sbjct: 191 DASVRTLIEFDGLQQFLKPIASPDGQKIALLYDAE-NPIFTFMLSLGLIPANANTDKLPV 249

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW- 397
           + I    E       WS  G  +   ++ G    +  +  +  +   +         +  
Sbjct: 250 EPIQLTHELQLGTFEWSRNGKNLYAKRYYGAYSQLYKIDANSGEALQITNAPMNIETSIL 309

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNG---RNETLINT 433
           SP G  + ++  +D     +L      G   +N  +INT
Sbjct: 310 SPDGNQIAWTS-QDAHGVYRLQVASSTGINIKNIEVINT 347



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 22/163 (13%)

Query: 268 NGKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           N K  + S+      +   I + +L       L            SPD   I F   +  
Sbjct: 14  NNKTLIYSISSSINGQEDRIATYNLLDKTKHILGEGSI----PKPSPDGQWIAFIKGKGE 69

Query: 325 KEQLYVMQSNGSDQKRISQ-----DKEASYFDPVWSPQGDLIAFTKF---------SGEK 370
            +QL++M+++ +++K++S            FD VW+P    +                 K
Sbjct: 70  AKQLWIMRADHTEEKQLSFVDVGLGHYQFTFDFVWAPDSKKLILEHQPYVPHWEKKPKPK 129

Query: 371 FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDG 412
             I  +     Q R L   D+++   +W P+   ++F +++ G
Sbjct: 130 SMIDSIDITTGQSRQLASFDASIFYLSWLPASNEVLFVKQRVG 172



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 71/205 (34%), Gaps = 42/205 (20%)

Query: 239 VYLMDTRIDRAPKRIGNFR---------SMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +Y + + I+    RI  +               P+ S +G+       K EA  ++ +  
Sbjct: 19  IYSISSSINGQEDRIATYNLLDKTKHILGEGSIPKPSPDGQWIAFIKGKGEAKQLWIMRA 78

Query: 290 QSNATERLTNTLFINIS---------ASYSPDSSQIV---------FESDREGKEQLYVM 331
                ++L    F+++            ++PDS +++         +E   + K  +  +
Sbjct: 79  DHTEEKQL---SFVDVGLGHYQFTFDFVWAPDSKKLILEHQPYVPHWEKKPKPKSMIDSI 135

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---------GEKFAIGVMKKDGSQ 382
                  ++++   +AS F   W P  + + F K              +   +  +D S 
Sbjct: 136 DITTGQSRQLAS-FDASIFYLSWLPASNEVLFVKQRVGAEYNEEIDRDWVQALNTQDASV 194

Query: 383 ERLLVEDSNLQA--PTWSPSGRSLI 405
             L+  D   Q   P  SP G+ + 
Sbjct: 195 RTLIEFDGLQQFLKPIASPDGQKIA 219



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 15/108 (13%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQA---PTWSPSGRSL 404
           P  SP G  IAF K  GE   + +M+ D ++E+ L    V   + Q      W+P  + L
Sbjct: 52  PKPSPDGQWIAFIKGKGEAKQLWIMRADHTEEKQLSFVDVGLGHYQFTFDFVWAPDSKKL 111

Query: 405 IFSRK-------KDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
           I   +       K     S + SID+  G++  L +  A      W+ 
Sbjct: 112 ILEHQPYVPHWEKKPKPKSMIDSIDITTGQSRQLASFDASIFYLSWLP 159


>gi|190576295|ref|YP_001974140.1| putative exported dipeptidyl peptidase IV [Stenotrophomonas
           maltophilia K279a]
 gi|190014217|emb|CAQ47861.1| putative exported dipeptidyl peptidase IV [Stenotrophomonas
           maltophilia K279a]
          Length = 741

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/321 (15%), Positives = 100/321 (31%), Gaps = 92/321 (28%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--- 263
            P     L +P+ +P+  +V++    D D  ++ L    ID    R+    S ++ P   
Sbjct: 32  LPLSGPTLMKPKVAPDGSQVSFLRGKDSDRNQLDLWTYDIDSGQTRLL-VDSKVVLPGTE 90

Query: 264 ------------------------RFSSNGKRALISVQKDEAMDIYSVDLQSNA---TER 296
                                   ++S + +R L  +      ++Y  DL+        +
Sbjct: 91  TLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPL----GGELYLYDLKQQGQAAVRQ 146

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--- 353
           LT+       A  SP    + F   R     L+V+      Q ++++D   +  + V   
Sbjct: 147 LTHGEGFATDAKLSPKGGFVSFIRGR----NLWVIDLASGRQLQLTRDGSTTIGNGVAEF 202

Query: 354 -------------WSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVED----- 389
                        W+P    IAF +         +++ +   + D  ++R          
Sbjct: 203 VADEEMDRHTGYWWAPDDSAIAFARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVR 262

Query: 390 --------SNLQAPTWS---------------PSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                   +    P W                   + L F R+        L  + L+  
Sbjct: 263 VQLGVIAPAADAQPRWIDLGKEQDIYLARVDWRDAQHLSFQRQSRDQKQLDLVEVALDSN 322

Query: 427 NETLINTPAYASDPQWVGFMD 447
            + ++   A+ + P WV   +
Sbjct: 323 RQRVL---AHETSPTWVPLHN 340



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 110/365 (30%), Gaps = 97/365 (26%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E  L+D+K + Q                         + +T  +G      L      VS
Sbjct: 130 ELYLYDLKQQGQ----------------------AAVRQLTHGEGFATDAKLSPKGGFVS 167

Query: 187 GIIKNSLCVMD----------RDGAN------IRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            I   +L V+D          RDG+         ++            ++P+   +A+A 
Sbjct: 168 FIRGRNLWVIDLASGRQLQLTRDGSTTIGNGVAEFVADEEMDRHTGYWWAPDDSAIAFAR 227

Query: 231 YDDEDIL----------------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR--A 272
            D+  +                 + Y      +   +      +    PR+   GK    
Sbjct: 228 IDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVRVQLGVIAPAADAQPRWIDLGKEQDI 287

Query: 273 LISVQKDEAMDIYSVDLQSNATERLT-----------NTLFINISASYSP--------DS 313
            ++          S   QS   ++L              L    S ++ P        D 
Sbjct: 288 YLARVDWRDAQHLSFQRQSRDQKQLDLVEVALDSNRQRVLAHETSPTWVPLHNSLRFLDD 347

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-- 371
             +++ S+R G + LY + S G      +     ++      P  +L+A  + +G+ +  
Sbjct: 348 GSVLWSSERTGFQHLYRIDSKGKA----TALTHGNW------PVDELLAVDEKAGKAYFR 397

Query: 372 ---------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                     I  +   G + + L +   + + +++ +  S+      +  T  ++    
Sbjct: 398 AGIETSRESQIYAVSLQGGEPQRLSKAPGMHSASFARN-ASVYVDSWSNSTTPPQIELFR 456

Query: 423 LNGRN 427
            NG  
Sbjct: 457 ANGEK 461


>gi|145243652|ref|XP_001394345.1| NACHT and WD40 domain protein [Aspergillus niger CBS 513.88]
 gi|134079026|emb|CAK48335.1| unnamed protein product [Aspergillus niger]
          Length = 1460

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 92/251 (36%), Gaps = 18/251 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V SG    ++ + D    +++ +      +     FS + + +A  + D      + + D
Sbjct: 969  VASGSSDQTVKIWDTATGSLQKILDHPATVYTV-AFSSDNKLLASGSGDR----FIRIWD 1023

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            T   R  +R+  +        FSS+  R L S   D  + ++     S   ER       
Sbjct: 1024 TDAWRETERL-EYSQYTTHLAFSSD-SRVLASASSDGDVKLWEKGTGSVTWERRNTQPTS 1081

Query: 304  NISA-SYSPDSSQIVFESDREGKEQLYVM--QSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             +   + SPD+  +   +D      +  +     GS  +R+S     +     +SP   L
Sbjct: 1082 QLKPMALSPDTQLLAAATDPPNSSDVVTLIDTKTGSIVRRLSHA--NNVAKVAFSPDNRL 1139

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +A          + +        +  V      APT+SP G+ L  + +   D   +L++
Sbjct: 1140 VACALMDNT---LTLWDTATWDIKRTVHYRYPNAPTFSPDGKLLTLNAR---DGTVQLWN 1193

Query: 421  IDLNGRNETLI 431
             +     +TL+
Sbjct: 1194 TNTETVEQTLL 1204



 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 84/244 (34%), Gaps = 15/244 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG     + + D D                   FS + + +A A+ D    ++++   T 
Sbjct: 1012 SGSGDRFIRIWDTDAWRETERLEYSQYTTHL-AFSSDSRVLASASSD--GDVKLWEKGTG 1068

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS-VDLQSNATERLTNTLFIN 304
                 +R     S +     S + +    +     + D+ + +D ++ +  R  +     
Sbjct: 1069 SVTWERRNTQPTSQLKPMALSPDTQLLAAATDPPNSSDVVTLIDTKTGSIVRRLSHANNV 1128

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               ++SPD+  +           L +  +   D KR    +  +   P +SP G L+   
Sbjct: 1129 AKVAFSPDNRLVACALM---DNTLTLWDTATWDIKRTVHYRYPN--APTFSPDGKLLTLN 1183

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               G    +     +  ++ LL    N     +SP+G+ +            +L+ + + 
Sbjct: 1184 ARDGTV-QLWNTNTETVEQTLLKSQRNTGV-VFSPNGQLMALMS---PFRAVRLWEV-IP 1237

Query: 425  GRNE 428
            GR E
Sbjct: 1238 GRRE 1241



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 49/255 (19%), Positives = 91/255 (35%), Gaps = 16/255 (6%)

Query: 194  CVMDRDGANIRY----LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             +    G +  +     T    +++    FSP+ + VA  + D      V + DT     
Sbjct: 933  WIRQISGTDKEWGALLQTLGHSEMVCCAAFSPDGKLVASGSSDQ----TVKIWDTATGSL 988

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             ++I +  + +    FSS+ K    S   D  + I+  D     TERL          ++
Sbjct: 989  -QKILDHPATVYTVAFSSDNKLLA-SGSGDRFIRIWDTDA-WRETERL-EYSQYTTHLAF 1044

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            S DS  +   S  +G  +L+   +     +R +    +       SP   L+A       
Sbjct: 1045 SSDSRVLASASS-DGDVKLWEKGTGSVTWERRNTQPTSQLKPMALSPDTQLLAAATDPPN 1103

Query: 370  KFAI--GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               +   +  K GS  R L   +N+    +SP  R +  +   +  T     + D+    
Sbjct: 1104 SSDVVTLIDTKTGSIVRRLSHANNVAKVAFSPDNRLVACALMDNTLTLWDTATWDIKRTV 1163

Query: 428  E-TLINTPAYASDPQ 441
                 N P ++ D +
Sbjct: 1164 HYRYPNAPTFSPDGK 1178


>gi|284041778|ref|YP_003392118.1| hypothetical protein Cwoe_0307 [Conexibacter woesei DSM 14684]
 gi|283945999|gb|ADB48743.1| hypothetical protein Cwoe_0307 [Conexibacter woesei DSM 14684]
          Length = 434

 Score = 68.1 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 74/246 (30%), Gaps = 42/246 (17%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR-ALISVQKDE 280
           +   VA+      D     +       AP  + N   +   P  S +G+R    ++  D 
Sbjct: 65  DGATVAWV-----DSAGALVSAPAAGGAPALVWNGGYVGNQPSISPDGQRFLWWTIAPDG 119

Query: 281 AMDIYSVDLQSNATERLTNTLFIN----------ISASYSPDSSQIVFESDREGKEQLYV 330
                +         RLT     +           S  +  D++   F SD +   ++  
Sbjct: 120 LGGTNA-----THVRRLTRGAASSEGLSYCIYCATSHGWLGDTALAAFPSDDDRPSKVCR 174

Query: 331 M-------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKD 379
           +           S  +++  D       P  SP G  I         +G +  I      
Sbjct: 175 IATTAEAPDVRSSCVQQLVSDPRGGIGFPSGSPDGREIVAALEPGAVTGTRGRIVRYSIA 234

Query: 380 GSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             Q    + E +    PTWS  G  + F      D   ++   DL    E ++    Y  
Sbjct: 235 TGQPLGDVTEGTQDTTPTWSADGTQIAF------DRAGQIVVKDLASGAERVVAQGVY-- 286

Query: 439 DPQWVG 444
            P W G
Sbjct: 287 -PFWGG 291



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 12/128 (9%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----DEAMDIYSVDLQSNATERLT 298
           D R     + + + R  I  P  S +G+  + +++          I    + +       
Sbjct: 183 DVRSSCVQQLVSDPRGGIGFPSGSPDGREIVAALEPGAVTGTRGRIVRYSIATGQPLGDV 242

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD----PVW 354
                + + ++S D +QI F  DR G  Q+ V       ++ ++Q     +      P  
Sbjct: 243 TEGTQDTTPTWSADGTQIAF--DRAG--QIVVKDLASGAERVVAQGVYPFWGGARTVPAP 298

Query: 355 SPQGDLIA 362
            P G  +A
Sbjct: 299 PPGGRELA 306



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 17/123 (13%), Positives = 36/123 (29%), Gaps = 13/123 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIGNFRSM 259
           ++ L       +  P  SP+ +++  A           R+        +    +    + 
Sbjct: 189 VQQLVSDPRGGIGFPSGSPDGREIVAALEPGAVTGTRGRIVRYSIATGQPLGDVTEG-TQ 247

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-----LFINISASYSPDSS 314
              P +S++G +       D A  I   DL S A   +               +  P   
Sbjct: 248 DTTPTWSADGTQIAF----DRAGQIVVKDLASGAERVVAQGVYPFWGGARTVPAPPPGGR 303

Query: 315 QIV 317
           ++ 
Sbjct: 304 ELA 306


>gi|311896164|dbj|BAJ28572.1| putative tricorn protease homolog [Kitasatospora setae KM-6054]
          Length = 1063

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 72/224 (32%), Gaps = 26/224 (11%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              +A+   D  D+    L          R+   R+ +  PR S +G     +       
Sbjct: 3   GGLLAFTAED--DVWVAPLAADGAVGRAWRVSADRTRVSHPRLSPDGAALAWTSWSALTP 60

Query: 283 DIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQL---YVMQSNGSDQ 338
           ++++  +      RLT     +     + P+   +   S  E        + + ++G+  
Sbjct: 61  EVFTAPVDGGEAVRLTYWGSQDTRVRGWLPNGEVLAVTSYHEPFAHYAWAWELPADGAPG 120

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--------DS 390
           +R+     A          G  +  T  +  + A     + G+  RL V+          
Sbjct: 121 RRLPWGPVADAQVGA----GHTVLLTDAAPHEPAFWKRYRGGATGRLWVDHDQLLPGLPG 176

Query: 391 NLQAPTWSP----SGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +L +P   P     G  + F    +G     LYS+  +G     
Sbjct: 177 HLASPM--PVTCADGTRIAFLSDHEG--VGNLYSVRPDGTGLRR 216



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 67/187 (35%), Gaps = 18/187 (9%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT-------ERLTNTL-FINISASYSPDSSQIVFES 320
           G RA      +    I    L             R+           + +PD  ++   +
Sbjct: 329 GNRAAWVTDAEGPDAIELAALPGKDAAEERPPHRRIAGGRIGRVQELAAAPDGGRLA-VA 387

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKK 378
             +G  +L ++ +       ++  +      P +SP    + +++    +   A+ + + 
Sbjct: 388 CSDG--RLLLVDTADGAVTEVTASRYGPVSSPSFSPDSRWLTWSEPVAGRSLRAVRLARA 445

Query: 379 DGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINT 433
           D  +E++ V D   +   P ++  GR L+F   +  D    +++ DL+   G    L+  
Sbjct: 446 DRPEEKVEVTDGRFEDEHPVFTRDGRFLVFLSWRGFDPVHDVHTGDLSFPLGCRPYLVPL 505

Query: 434 PAYASDP 440
            A    P
Sbjct: 506 AAGTPSP 512



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 78/256 (30%), Gaps = 25/256 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQI-LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +  +  DGA  R    S D+  +  PR SP+   +A+ ++       V+        A +
Sbjct: 16  VAPLAADGAVGRAWRVSADRTRVSHPRLSPDGAALAWTSWSA-LTPEVFTAPVDGGEAVR 74

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE---AMDIYSVDLQSNATERLTNTLFINISAS 308
                        +  NG+   ++   +        + +        RL      +    
Sbjct: 75  LTYWGSQDTRVRGWLPNGEVLAVTSYHEPFAHYAWAWELPADGAPGRRLPWGPVADAQV- 133

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD---------PVWSPQGD 359
               +   V  +D    E  +  +  G    R+  D +              PV    G 
Sbjct: 134 ---GAGHTVLLTDAAPHEPAFWKRYRGGATGRLWVDHDQLLPGLPGHLASPMPVTCADGT 190

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAF         +  ++ DG+  R   + +   A   +  G  +++           ++
Sbjct: 191 RIAFLSDHEGVGNLYSVRPDGTGLRRHTDHAAYYAREAATDGVRVVY------QHAGDVW 244

Query: 420 SID-LNGRNETLINTP 434
            +D L+      ++ P
Sbjct: 245 LLDSLDAPAPRRLDVP 260



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 7/124 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +   R   + E   +P+  ++A A  D     R+ L+DT      +   +    + +
Sbjct: 361 HRRIAGGRIGRVQELAAAPDGGRLAVACSDG----RLLLVDTADGAVTEVTASRYGPVSS 416

Query: 263 PRFSSNGKRALISV-QKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIVFE 319
           P FS + +    S      ++    +       E+  +T+  F +    ++ D   +VF 
Sbjct: 417 PSFSPDSRWLTWSEPVAGRSLRAVRLARADRPEEKVEVTDGRFEDEHPVFTRDGRFLVFL 476

Query: 320 SDRE 323
           S R 
Sbjct: 477 SWRG 480



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 58/183 (31%), Gaps = 13/183 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +     DG     LT    Q      + PN + +A  +Y +      +  +   D AP 
Sbjct: 61  EVFTAPVDGGEAVRLTYWGSQDTRVRGWLPNGEVLAVTSYHEPFAHYAWAWELPADGAPG 120

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT----LFINIS- 306
           R   +  +  A   +  G   L++         +             +       +    
Sbjct: 121 RRLPWGPVADAQVGA--GHTVLLTDAAPHEPAFWKRYRGGATGRLWVDHDQLLPGLPGHL 178

Query: 307 ----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                    D ++I F SD EG   LY ++ +G+  +R      A+Y+    +  G  + 
Sbjct: 179 ASPMPVTCADGTRIAFLSDHEGVGNLYSVRPDGTGLRR--HTDHAAYYAREAATDGVRVV 236

Query: 363 FTK 365
           +  
Sbjct: 237 YQH 239



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 4/101 (3%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V   DGA +  +T SR   +  P FSP+ + + ++       LR   +        K 
Sbjct: 394 LLVDTADGA-VTEVTASRYGPVSSPSFSPDSRWLTWSEPVAGRSLRAVRLARADRPEEKV 452

Query: 253 -IGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQ 290
            + + R     P F+ +G+  +    +  D   D+++ DL 
Sbjct: 453 EVTDGRFEDEHPVFTRDGRFLVFLSWRGFDPVHDVHTGDLS 493


>gi|294674861|ref|YP_003575477.1| lipoprotein [Prevotella ruminicola 23]
 gi|294472852|gb|ADE82241.1| putative lipoprotein [Prevotella ruminicola 23]
          Length = 468

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 25/159 (15%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYAT-------YDDEDILRVYL---MDTRIDRAPKRIGN 255
           L     +    P FSP+ + + Y         +D + +    +    D +      ++  
Sbjct: 262 LLSDSLKFETFPTFSPDGKYIYYCAADSVSLPHDIKQLQYSLVRIAFDEKTGTIGTQVDT 321

Query: 256 --FRSMILAPRFSSNGKRALISVQKDEAMDIY-------SVDLQSNATERLT--NTLFIN 304
              +  +  PR S +G+  L +V       I+        ++LQ+   + L+  N+   +
Sbjct: 322 LYHQRSVCHPRVSPDGQYILYTVADYGTFPIWHPEADLQMMNLQTGKIDTLSIVNSAKSD 381

Query: 305 ISASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQK 339
              S+S +S   VF S R+    GK     +  +G   K
Sbjct: 382 TYHSWSSNSRWFVFASKRDDGLYGKPYFCYIDKHGKAHK 420



 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/215 (20%), Positives = 73/215 (33%), Gaps = 46/215 (21%)

Query: 265 FSSNGKRALISVQK-------DEAMDIYSVDLQSN------ATER------LTNTLFINI 305
           FS  G+    S QK       D +  +   D +SN         R      L+++L    
Sbjct: 212 FSPTGRYITYSTQKIIPAFHSDPSKRLEVYDSESNVCVADMQEHRIFTSPLLSDSLKFET 271

Query: 306 SASYSPDSSQIVFES-DREGKEQ--------LYVMQSN---GSDQKRI-SQDKEASYFDP 352
             ++SPD   I + + D              L  +  +   G+   ++ +   + S   P
Sbjct: 272 FPTFSPDGKYIYYCAADSVSLPHDIKQLQYSLVRIAFDEKTGTIGTQVDTLYHQRSVCHP 331

Query: 353 VWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLLV----EDSNLQAPTWSPSG 401
             SP G  I +T      F I        +M     +   L       S+    +WS + 
Sbjct: 332 RVSPDGQYILYTVADYGTFPIWHPEADLQMMNLQTGKIDTLSIVNSAKSDTYH-SWSSNS 390

Query: 402 RSLIFSRKKDGDTGSKLY--SIDLNGRNETLINTP 434
           R  +F+ K+D     K Y   ID +G+       P
Sbjct: 391 RWFVFASKRDDGLYGKPYFCYIDKHGKAHKPFCLP 425


>gi|85707804|ref|ZP_01038870.1| hypothetical protein NAP1_01175 [Erythrobacter sp. NAP1]
 gi|85689338|gb|EAQ29341.1| hypothetical protein NAP1_01175 [Erythrobacter sp. NAP1]
          Length = 804

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 81/216 (37%), Gaps = 29/216 (13%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            Y     + + L D              + I    +S++G + + +  + +AMD++ ++ 
Sbjct: 90  RYGTRAFVGLSLQDIATGEVRAIDLPANADISDVAWSTDGSKIVFTNTRADAMDVHVLNT 149

Query: 290 QSNATERLTNTLFINI--SASYSPDSS--QIVFESDREGKE-------QLYVMQSNGSDQ 338
            S A   L       +  S S+ P  S   +   SDR  K           +  ++G  +
Sbjct: 150 ASGAVATLMTGGVNPVFQSPSWLPGGSLLTLAIPSDRGAKPIESLTPQGPAIQDASGGQE 209

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            + ++  +    +P      D   F   +  +  I  M  DGS +R++ E     + + S
Sbjct: 210 AQ-TRTFQNLLENPH-----DEAMFKWLATSQPVI--MDADGSNKRMVGEPRIYTSVSAS 261

Query: 399 PSGRSLI-------FSRK---KDGDTGSKLYSIDLN 424
           P G+ L+       FS +         S +Y++D +
Sbjct: 262 PDGQYLLMEWINEPFSYQVPWYRFPRTSAIYTMDGD 297



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 58/203 (28%), Gaps = 26/203 (12%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFS--SNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                  P  + +  +   APR S   +    L+    +        DL     E+L   
Sbjct: 26  QDGYQTPPPEVTDIVTRAPAPRVSISPDNDLILL---MEREALPPVADLA-RPMEKL--- 78

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I + AS +       F         L +      + + I     A   D  WS  G  
Sbjct: 79  AGIRLDASINDRYGTRAFV-------GLSLQDIATGEVRAIDLPANADISDVAWSTDGSK 131

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDS---NLQAPTWSPSGR--SLIFSRKKDGDTG 415
           I FT    +   + V+         L+        Q+P+W P G   +L     +     
Sbjct: 132 IVFTNTRADAMDVHVLNTASGAVATLMTGGVNPVFQSPSWLPGGSLLTLAIPSDRGAKPI 191

Query: 416 SKL-----YSIDLNGRNETLINT 433
             L        D +G  E    T
Sbjct: 192 ESLTPQGPAIQDASGGQEAQTRT 214



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 52/159 (32%), Gaps = 21/159 (13%)

Query: 288 DLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D+ +     +      +IS  ++S D S+IVF + R     ++V+ +       +     
Sbjct: 103 DIATGEVRAIDLPANADISDVAWSTDGSKIVFTNTRADAMDVHVLNTASGAVATLMTGGV 162

Query: 347 ASYF-DPVWSPQGDLIAFTKFSGEKFAI---------GVMKKDGSQERLL-VEDSNLQAP 395
              F  P W P G L+     S                +    G QE       + L+ P
Sbjct: 163 NPVFQSPSWLPGGSLLTLAIPSDRGAKPIESLTPQGPAIQDASGGQEAQTRTFQNLLENP 222

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                     +         S+   +D +G N+ ++  P
Sbjct: 223 H---DEAMFKWLAT------SQPVIMDADGSNKRMVGEP 252



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 51/190 (26%), Gaps = 44/190 (23%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISV 276
            +S +  K+ +      D + V++++T        +    + +  +P +   G    +++
Sbjct: 124 AWSTDGSKIVFTNTRA-DAMDVHVLNTASGAVATLMTGGVNPVFQSPSWLPGGSLLTLAI 182

Query: 277 QKDEAMDIY---------SVDLQSNATER------LTNTLFINISASYSPDSSQIVFESD 321
             D                 D       +      L           +            
Sbjct: 183 PSDRGAKPIESLTPQGPAIQDASGGQEAQTRTFQNLLENPHDEAMFKWLA---------- 232

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------------GE 369
                Q  +M ++GS+++ +   +   Y     SP G  +     +              
Sbjct: 233 ---TSQPVIMDADGSNKRMV--GEPRIYTSVSASPDGQYLLMEWINEPFSYQVPWYRFPR 287

Query: 370 KFAIGVMKKD 379
             AI  M  D
Sbjct: 288 TSAIYTMDGD 297


>gi|295095329|emb|CBK84419.1| Protein of unknown function (DUF3748) [Enterobacter cloacae subsp.
           cloacae NCTC 9394]
          Length = 423

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 18/153 (11%)

Query: 280 EAMDIYSVDLQSNATERLTNT------LFINISASY---SPDSSQIVF-ESDREGKEQLY 329
              D            RLT T        +N+   +   +P  +QI F   D  G  QL+
Sbjct: 269 GTPDTMPAPPAGVTQRRLTFTHQKAYPGLVNVPRHWVRSNPQGTQIAFLMRDDNGVVQLW 328

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++   G + ++++  +        W P G+ + F         I        +   L  D
Sbjct: 329 LISPEGGEPRQLTHTERDIQSAFNWHPSGNGLGFVLAG----RIACCDAQTGEVTFLTSD 384

Query: 390 SNL----QAPTWSPSGRSLIFSRKKDGDTGSKL 418
                   A  +SP GR + +  +KDG     L
Sbjct: 385 HGNPPSADAVVFSPDGRFIAWMEEKDGFRQLWL 417



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   ++A+   DD  +++++L+        +     R +  A  +  +G      +    
Sbjct: 309 PQGTQIAFLMRDDNGVVQLWLISPEGGEPRQLTHTERDIQSAFNWHPSGNGLGFVL---- 364

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
           A  I   D Q+     LT+      SA    +SPD   I +  +++G  QL++ 
Sbjct: 365 AGRIACCDAQTGEVTFLTSDHGNPPSADAVVFSPDGRFIAWMEEKDGFRQLWLT 418



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 3/95 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++  +G   R LT +   I     + P+   + +       I         +     
Sbjct: 326 QLWLISPEGGEPRQLTHTERDIQSAFNWHPSGNGLGFVL--AGRIACCDAQTGEVTFLTS 383

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             GN  S   A  FS +G+      +KD    ++ 
Sbjct: 384 DHGNPPSAD-AVVFSPDGRFIAWMEEKDGFRQLWL 417


>gi|253569803|ref|ZP_04847212.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251840184|gb|EES68266.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 844

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 71/205 (34%), Gaps = 29/205 (14%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---VQKDEAMDIY 285
             Y     L    M+         + +   +   P    +G+  L S     KD+   +Y
Sbjct: 188 CNYFAGGSLSKIKMNGIWAEEETLLTDEDGVYRDPNLHFDGQHLLFSWKKSAKDDDFHLY 247

Query: 286 SVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGK---------EQLYVMQSNG 335
            +DL++ A ++LT      +I   Y PD   I+F S R G            +Y+    G
Sbjct: 248 EMDLKTRAVKQLTFGKGHADIEGIYLPD-ENILFNSTRSGSAVDCWFTEVSNMYLCDREG 306

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVED 389
              +++  D+  +   P     G  + +T++            +  M  DG+      + 
Sbjct: 307 RYMRQVGFDQVHT-TTPTLLDDGR-VVYTRWDYNDRGQVWAQPLFQMNPDGTG-----QA 359

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDT 414
                 +W P   ++  +R+  G  
Sbjct: 360 EYYGMNSWFP--TTVAHTRQIPGTR 382


>gi|291571439|dbj|BAI93711.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 486

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 82/218 (37%), Gaps = 18/218 (8%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            SL  ++ + A+IR L    + +     FS + + +A A+ D      + L +       
Sbjct: 229 RSLWTLNPE-ADIRTLGGHSNSVRSV-SFSGDGKMLASASADK----TIKLWNLSNGEEI 282

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASY 309
           +     +S + A  FS +G+    S  +D+ + ++  D+ +    + L        + ++
Sbjct: 283 RTFEGHKSGVNAVAFSPDGQIIA-SGSQDKTIKLW--DINTGEEIQSLAGHKMAVNAITF 339

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +P+   I       G + + +       +         +      SP  ++IA       
Sbjct: 340 APNGEIIA---SGGGDKIVKLWNRETGLETLNLSGHRLAITALAISPNSEIIA---SGSG 393

Query: 370 KFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
              I + +    +E L +  +   + A  +SP G+ LI
Sbjct: 394 DKTIKLWRVTTGEEILTIGGAKTAINALMFSPDGKILI 431



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 84/229 (36%), Gaps = 21/229 (9%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +Q K+      +       L     +   + +G   + + +  FS +GK    S   D+ 
Sbjct: 212 SQSKIFGIEAGEISAPGRSLWTLNPEADIRTLGGHSNSVRSVSFSGDGKMLA-SASADKT 270

Query: 282 MDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + ++  +L +    R        ++A ++SPD   I   S     + + +   N  ++ +
Sbjct: 271 IKLW--NLSNGEEIRTFEGHKSGVNAVAFSPDGQIIASGSQ---DKTIKLWDINTGEEIQ 325

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWS 398
                + +     ++P G++IA     G    + +  ++   E L +      + A   S
Sbjct: 326 SLAGHKMAVNAITFAPNGEIIA---SGGGDKIVKLWNRETGLETLNLSGHRLAITALAIS 382

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLN------GRNETLINTPAYASDPQ 441
           P+   +       GD   KL+ +         G  +T IN   ++ D +
Sbjct: 383 PNSEIIA---SGSGDKTIKLWRVTTGEEILTIGGAKTAINALMFSPDGK 428



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 83/283 (29%), Gaps = 45/283 (15%)

Query: 101 QDWNSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKI 154
            D  +LG        V   G  ++          +LW++ + ++I  + F    +    +
Sbjct: 238 ADIRTLGGHSNSVRSVSFSGDGKMLASASADKTIKLWNLSNGEEI--RTFEGHKSGVNAV 295

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           A +    I                       SG    ++ + D +              +
Sbjct: 296 AFSPDGQII---------------------ASGSQDKTIKLWDINTGEEIQSLAGHKMAV 334

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               F+PN + +A           V L +         +   R  I A   S N    + 
Sbjct: 335 NAITFAPNGEIIA----SGGGDKIVKLWNRETGLETLNLSGHRLAITALAISPN-SEIIA 389

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGKEQLYVM 331
           S   D+ + ++ V   +   E LT       IN    +SPD   ++   D    + + V 
Sbjct: 390 SGSGDKTIKLWRV---TTGEEILTIGGAKTAINA-LMFSPDGKILIAGID---DKTVKVW 442

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           Q     + R              SP G  +A +     +  I 
Sbjct: 443 QWETETEIRTISGYNWQVGAIAISPDGQNLA-SGSEDNQIKIW 484



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 73/218 (33%), Gaps = 30/218 (13%)

Query: 90  KITNPDSIPRFQDWNSLGAQVLVT---GRVIKEGKDRLRVEFRLWDVKDR---KQIIGKK 143
            ++N + I  F+   S G   +     G++I  G     +  +LWD+      + + G K
Sbjct: 275 NLSNGEEIRTFEGHKS-GVNAVAFSPDGQIIASGSQDKTI--KLWDINTGEEIQSLAGHK 331

Query: 144 FFSSPASWRKIAHTIS----DDIYQSITGEKGDFN----------SRILFVSES--VVSG 187
              +  ++      I+    D I +    E G             + +     S  + SG
Sbjct: 332 MAVNAITFAPNGEIIASGGGDKIVKLWNRETGLETLNLSGHRLAITALAISPNSEIIASG 391

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               ++ +                  +    FSP+  K+  A  DD+    V +     +
Sbjct: 392 SGDKTIKLWRVTTGEEILTIGGAKTAINALMFSPDG-KILIAGIDDK---TVKVWQWETE 447

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
              + I  +   + A   S +G+    S  +D  + I+
Sbjct: 448 TEIRTISGYNWQVGAIAISPDGQNLA-SGSEDNQIKIW 484


>gi|251773029|gb|EES53585.1| protein of unknown function [Leptospirillum ferrodiazotrophum]
          Length = 443

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 96/306 (31%), Gaps = 34/306 (11%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG-IIK 190
           D +  + +    F   P + R  +  IS          +  +      +        ++ 
Sbjct: 117 DTQTGEMV---TFPFDPDAVRPQSFQISPSGRHLAIHTRQRWKPYTRKILWKTTKHIVMG 173

Query: 191 NSLCVMDRDGANIRYLT------PSRDQILFEPRFSPNQQKVAYATYDDEDILR--VYLM 242
           + L V    G N   +          ++ L +  + P+ +++ Y     E   R    L 
Sbjct: 174 DQLTVCGPLGENKIDVIDWPASRHHHEESLGDFHWLPDGERLVYIVRFKEGRFREESLLY 233

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATER 296
                   + +      I     S +G       +            I  +DL++     
Sbjct: 234 LWSPGEGSRELYRSSEHIDHFSVSPDGGTLWFHTRDRRIESPARRNTIVRLDLRTGEAVP 293

Query: 297 LTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           L            SP    I+ E   E G   L +++    +   + +     Y  P+WS
Sbjct: 294 LLVHREFFY-PMVSPAGGNILMEMQAEAGGRGLALLREGAEEPTPVVKTGYNLY--PLWS 350

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD--------GSQERLLVEDSN----LQAPTWSPSGRS 403
           P+G+   + +   +         +        GS  ++L  D+        P+++PSG+ 
Sbjct: 351 PRGNAFLYLRTRPDSKPFWTWPTEPLLQNVEGGSPNKILPVDATARLVNCRPSFAPSGKE 410

Query: 404 LIFSRK 409
           ++F  +
Sbjct: 411 IVFVAR 416



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 75/247 (30%), Gaps = 54/247 (21%)

Query: 217 PRFSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIG----------NFRSM 259
           P FSP+  K+A          ++  D+  + ++D    +    +G            R  
Sbjct: 22  PTFSPDGTKIACVRLTDPDTIHETRDLGCLTVIDASTGKVLHDVGENLVAVNYRERGRGA 81

Query: 260 I-LAPRFSSNGKRALISVQK----DEAMDIYSVDLQSNATERLTNTLFINI----SASYS 310
             L P +S +G+       +            V L +   E +T     +     S   S
Sbjct: 82  NELVPVWSPDGRYITFHQDRKKWEHFGAQWMLVRLDTQTGEMVTFPFDPDAVRPQSFQIS 141

Query: 311 PDSSQIVFESDREGKE-----------------QLYVMQSNGSDQKRI------SQDKEA 347
           P    +   + +  K                  QL V    G ++  +          E 
Sbjct: 142 PSGRHLAIHTRQRWKPYTRKILWKTTKHIVMGDQLTVCGPLGENKIDVIDWPASRHHHEE 201

Query: 348 SYFDPVWSPQGDLIAF-TKFSGEKFA----IGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           S  D  W P G+ + +  +F   +F     + +         L     ++   + SP G 
Sbjct: 202 SLGDFHWLPDGERLVYIVRFKEGRFREESLLYLWSPGEGSRELYRSSEHIDHFSVSPDGG 261

Query: 403 SLIFSRK 409
           +L F  +
Sbjct: 262 TLWFHTR 268



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 91/293 (31%), Gaps = 45/293 (15%)

Query: 195 VMDRDGAN---IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAP 250
           V+   G N   + Y    R      P +SP+ + + +     + +      M  R+D   
Sbjct: 61  VLHDVGENLVAVNYRERGRGANELVPVWSPDGRYITFHQDRKKWEHFGAQWMLVRLDTQT 120

Query: 251 KRIGNFRSMILAPR-----FSSNGKRALISVQKDEAMDIYSVDLQSNATE----RLT--- 298
             +  F     A R      S +G+   I  ++        +  ++        +LT   
Sbjct: 121 GEMVTFPFDPDAVRPQSFQISPSGRHLAIHTRQRWKPYTRKILWKTTKHIVMGDQLTVCG 180

Query: 299 -----NTLFINISAS------------YSPDSSQIVF-ESDREGKEQ---LYVMQSNGSD 337
                    I+  AS            + PD  ++V+    +EG+ +   L  + S G  
Sbjct: 181 PLGENKIDVIDWPASRHHHEESLGDFHWLPDGERLVYIVRFKEGRFREESLLYLWSPGEG 240

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVMKKDGSQERLLVEDSN 391
            + + +  E      V SP G  + F            +  I  +     +   L+    
Sbjct: 241 SRELYRSSEHIDHFSV-SPDGGTLWFHTRDRRIESPARRNTIVRLDLRTGEAVPLLVHRE 299

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              P  SP+G +++    +    G  L  +       T +    Y   P W  
Sbjct: 300 FFYPMVSPAGGNIL-MEMQAEAGGRGLALLREGAEEPTPVVKTGYNLYPLWSP 351



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 73/209 (34%), Gaps = 22/209 (10%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-KDEA 281
             ++       E+ + V           + +G+F        +  +G+R +  V+ K+  
Sbjct: 173 GDQLTVCGPLGENKIDVIDWPASRHHHEESLGDFH-------WLPDGERLVYIVRFKEGR 225

Query: 282 MD----IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDR-----EGKEQLYVM 331
                 +Y       + E   ++  I+   S SPD   + F   DR       +  +  +
Sbjct: 226 FREESLLYLWSPGEGSRELYRSSEHIDHF-SVSPDGGTLWFHTRDRRIESPARRNTIVRL 284

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVEDS 390
                +   +   +E  +F P+ SP G  I     +      + ++++   +   +V+  
Sbjct: 285 DLRTGEAVPLLVHRE--FFYPMVSPAGGNILMEMQAEAGGRGLALLREGAEEPTPVVKTG 342

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
               P WSP G + ++ R +        +
Sbjct: 343 YNLYPLWSPRGNAFLYLRTRPDSKPFWTW 371



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 59/205 (28%), Gaps = 14/205 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE- 234
           R++++         + SL  +   G   R L  S + I      SP+   + + T D   
Sbjct: 214 RLVYIVRFKEGRFREESLLYLWSPGEGSRELYRSSEHIDHF-SVSPDGGTLWFHTRDRRI 272

Query: 235 --DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                R  ++   +                P  S  G   L+ +Q +      ++  +  
Sbjct: 273 ESPARRNTIVRLDLRTGEAVPLLVHREFFYPMVSPAGGNILMEMQAEAGGRGLALLREGA 332

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM-------QSNGSDQKRISQDK 345
                      N+   +SP  +  ++   R   +  +            G    +I    
Sbjct: 333 EEPTPVVKTGYNLYPLWSPRGNAFLYLRTRPDSKPFWTWPTEPLLQNVEGGSPNKILPVD 392

Query: 346 EASYF---DPVWSPQGDLIAFTKFS 367
             +      P ++P G  I F    
Sbjct: 393 ATARLVNCRPSFAPSGKEIVFVARD 417



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 23/106 (21%)

Query: 352 PVWSPQGDLIAFTKFSGEKFA--------IGVMKKDGSQE-------------RLLVEDS 390
           P +SP G  IA  + +             + V+     +              R     +
Sbjct: 22  PTFSPDGTKIACVRLTDPDTIHETRDLGCLTVIDASTGKVLHDVGENLVAVNYRERGRGA 81

Query: 391 NLQAPTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNGRNETLINTP 434
           N   P WSP GR + F + +      G++   + L+ +   ++  P
Sbjct: 82  NELVPVWSPDGRYITFHQDRKKWEHFGAQWMLVRLDTQTGEMVTFP 127


>gi|29349834|ref|NP_813337.1| hypothetical protein BT_4426 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29341745|gb|AAO79531.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 844

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 71/205 (34%), Gaps = 29/205 (14%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---VQKDEAMDIY 285
             Y     L    M+         + +   +   P    +G+  L S     KD+   +Y
Sbjct: 188 CNYFAGGSLSKIKMNGIWAEEETLLTDEDGVYRDPNLHFDGQHLLFSWKKSAKDDDFHLY 247

Query: 286 SVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGK---------EQLYVMQSNG 335
            +DL++ A ++LT      +I   Y PD   I+F S R G            +Y+    G
Sbjct: 248 EMDLKTRAVKQLTFGKGHADIEGIYLPD-ENILFNSTRSGSAVDCWFTEVSNMYLCDREG 306

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVED 389
              +++  D+  +   P     G  + +T++            +  M  DG+      + 
Sbjct: 307 RYMRQVGFDQVHT-TTPTLLDDGR-VVYTRWDYNDRGQVWAQPLFQMNPDGTG-----QA 359

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDT 414
                 +W P   ++  +R+  G  
Sbjct: 360 EYYGMNSWFP--TTVAHTRQIPGTR 382


>gi|297157806|gb|ADI07518.1| putative protease [Streptomyces bingchenggensis BCW-1]
          Length = 1204

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 26/170 (15%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+   R+ +  PRFS +G     +  +    +IY V +   A  RLT    ++     ++
Sbjct: 52  RLTVDRTRVGHPRFSPDGSHIAFTTWRSLDPEIYLVPVDGGAARRLTYWGGVDARVCGWT 111

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P         D++G   +  +    S  + +S    A       SP G L       G  
Sbjct: 112 PP--------DQDGTSHILAVS---SHDQPLSHFSWAYSLPTDGSPGGRL-----PWGPV 155

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             I V + DG +  LL+  +    P          + R + G TG +L+ 
Sbjct: 156 SDIAVTEVDGERRTLLLTGTPPHEPA--------SWKRYRGGATG-RLWL 196



 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 51/160 (31%), Gaps = 33/160 (20%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               RLT          +SPD S I F + R    ++Y++  +G   +R++         
Sbjct: 48  GRAWRLTVDRTRVGHPRFSPDGSHIAFTTWRSLDPEIYLVPVDGGAARRLTYWGGVDARV 107

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             W+P           G    + V             D  L   +W        +S   D
Sbjct: 108 CGWTP-------PDQDGTSHILAVSS----------HDQPLSHFSW-------AYSLPTD 143

Query: 412 GDTG--------SKLYSIDLNGRNETLINTPAYASDPQ-W 442
           G  G        S +   +++G   TL+ T     +P  W
Sbjct: 144 GSPGGRLPWGPVSDIAVTEVDGERRTLLLTGTPPHEPASW 183



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 90/283 (31%), Gaps = 40/283 (14%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAP 250
             +  RDG   R L  +    +  P    +  +VAY T  + +  I   YL      R  
Sbjct: 328 YWLTHRDG-PARTLADTPGVRVRLPEMLGDTGRVAYVTDAEGEDAIEIAYLPRASGPRER 386

Query: 251 KRIGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS- 308
           +R+   R   +     S +GKR  ++   D  + +    + ++          ++ SA  
Sbjct: 387 RRLAVGRLGRVHEMVASPDGKRLAVAA-HDGRLLLVDTSVDTSVDA--AEDASVDTSADG 443

Query: 309 ------YSPDSSQIV------FESDREGKEQLYVMQ------------SNGSDQKRISQD 344
                  SPDS+           +D                        +  +   + + 
Sbjct: 444 APEAEDTSPDSAAQAEDTGPDAAADTSPDAAPDPAPDPTPGPSTSAEIPDVDEVSELIRS 503

Query: 345 KEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                 D  +SP    +A++      S  +  I  +  D +   +       + P ++  
Sbjct: 504 TNGPVRDLAFSPDSGWLAWSHPGIGRSLRQIKIARL-ADRTVVDVTSGRFEDEEPVFTRD 562

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
           GR L F   +  D    +++ DL+   G    L+   +    P
Sbjct: 563 GRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSP 605


>gi|325002458|ref|ZP_08123570.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Pseudonocardia sp. P1]
          Length = 626

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 61/195 (31%), Gaps = 21/195 (10%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDL-------QSNATERLTNTLFIN-ISASYSPDS 313
           +P  S +G R            ++   L        + +T  + +    +  + ++SPD 
Sbjct: 28  SPVVSPDGTRIAWISDLSGRPRVHIAPLPEHGPVDPAGSTVLVADGEHPDVTTLAWSPDG 87

Query: 314 SQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------- 364
            +I  E    G ++  V  +  +G     I+    A      W+P G  +  T       
Sbjct: 88  GRIAVEIAPSGSDRTRVALLDPDGGPPVEIAPAATA-VTLGAWAPTGRWLGVTILTDAGD 146

Query: 365 --KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                       ++        +L           S  GR ++    + G+ G  L  + 
Sbjct: 147 PGSDDYGTGTACLVDVRDGSSVVLGTGQAATVQAISADGRRVVLRTGRRGERGLDLVDLR 206

Query: 423 LNGRNETLINTPAYA 437
             G  + LI  P  A
Sbjct: 207 -TGARDRLIGGPGGA 220



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 20/196 (10%), Positives = 52/196 (26%), Gaps = 21/196 (10%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-------RSMILAPRFS 266
              P  SP+  ++A+ + D     RV++            G+           +    +S
Sbjct: 26  HHSPVVSPDGTRIAWIS-DLSGRPRVHIAPLPEHGPVDPAGSTVLVADGEHPDVTTLAWS 84

Query: 267 SNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----- 319
            +G R  + +    +    +  +D        +          +++P    +        
Sbjct: 85  PDGGRIAVEIAPSGSDRTRVALLDPDGGPPVEIAPAATAVTLGAWAPTGRWLGVTILTDA 144

Query: 320 ----SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
               SD  G     ++         +   + A+      S  G  +        +  + +
Sbjct: 145 GDPGSDDYGTGTACLVDVRDGSSVVLGTGQAATV--QAISADGRRVVLRTGRRGERGLDL 202

Query: 376 MKKDGSQERLLVEDSN 391
           +         L+    
Sbjct: 203 VDLRTGARDRLIGGPG 218



 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 20/115 (17%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK------DGSQERLLVEDSNLQAP-----T 396
            +  PV SP G  IA+      +  + +         D +   +LV D   + P      
Sbjct: 25  GHHSPVVSPDGTRIAWISDLSGRPRVHIAPLPEHGPVDPAGSTVLVADG--EHPDVTTLA 82

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-------ETLINTPAYASDPQWVG 444
           WSP G  +       G   +++  +D +G          T +   A+A   +W+G
Sbjct: 83  WSPDGGRIAVEIAPSGSDRTRVALLDPDGGPPVEIAPAATAVTLGAWAPTGRWLG 137



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/145 (12%), Positives = 45/145 (31%), Gaps = 10/145 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+  ++A              +       P  I    + +    ++  G+   +++ 
Sbjct: 82  AWSPDGGRIAVEIAPSGSDRTRVALLDPDGGPPVEIAPAATAVTLGAWAPTGRWLGVTIL 141

Query: 278 KD---------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            D                VD++  ++  L       + A  S D  ++V  + R G+  L
Sbjct: 142 TDAGDPGSDDYGTGTACLVDVRDGSSVVLGTGQAATVQA-ISADGRRVVLRTGRRGERGL 200

Query: 329 YVMQSNGSDQKRISQDKEASYFDPV 353
            ++      + R+      +     
Sbjct: 201 DLVDLRTGARDRLIGGPGGALTATA 225


>gi|218245440|ref|YP_002370811.1| WD-40 repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|257058476|ref|YP_003136364.1| hypothetical protein Cyan8802_0582 [Cyanothece sp. PCC 8802]
 gi|218165918|gb|ACK64655.1| WD-40 repeat protein [Cyanothece sp. PCC 8801]
 gi|256588642|gb|ACU99528.1| WD-40 repeat protein [Cyanothece sp. PCC 8802]
          Length = 1264

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 81/223 (36%), Gaps = 22/223 (9%)

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA---NIRYLTPSRDQILFEPRFSPNQQK 225
             K +FN ++  +      G  K    +   DG    N           +    FSP+ QK
Sbjct: 1019 WKVEFNPKLSILGTVSNDGTAK----LWKFDGTMHRNFNNFLQEDPDKVISLSFSPDGQK 1074

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL----APRFSSNGKRALISVQKDEA 281
            +A A +   +  ++ +M   ++   K I  F S+         FS++G     +  KD  
Sbjct: 1075 LATARWVRVNSKKIDVMLWDVNGLEKPIQKFPSLQTNWLKDIDFSADGSMIA-TSSKDGT 1133

Query: 282  MDIYSVDLQSNATER-----LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            + ++S++ +     +     + +      S S+SP    ++  SD    +Q   + +   
Sbjct: 1134 VKLWSLNGEDQTPYQNNYPKINHNNSTISSVSFSPIQPLLLTASD----DQTVKLWTIDG 1189

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
              ++     + +     +SP G  IA +  S  K  +      
Sbjct: 1190 KLQQTFFGHQGAVLSATFSPNGQFIA-SSGSDGKVILWKRDLT 1231



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 90/253 (35%), Gaps = 26/253 (10%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V+      ++   + +G  +          ++   FS + + +A A+ D    ++++ ++
Sbjct: 860  VIGASHDKTIKFWNLEGKEL-TTLKGHQSAIWRAIFSSDGKTLASASED--GTVKLWTLN 916

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA----TERLTN 299
                   + I   +  I    F+ +G+    +  +D  + ++  D ++       + +  
Sbjct: 917  D------QDILGHKGRISQVSFNPDGQTLA-TAAEDHTVKLWRFDGKNTDNLQYLKTIQA 969

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                  S  +SPD S +   S  +   +L+                 A  +   ++P+  
Sbjct: 970  HTNEVRSVDFSPDGSLLATASF-DKTAKLWNWNLETDKPLSTFNKHTAELWKVEFNPKLS 1028

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------TWSPSGRSLIFSRK-KDG 412
            ++      G      + K DG+  R    +   + P      ++SP G+ L  +R  +  
Sbjct: 1029 ILGTVSNDGTA---KLWKFDGTMHRN-FNNFLQEDPDKVISLSFSPDGQKLATARWVRVN 1084

Query: 413  DTGSKLYSIDLNG 425
                 +   D+NG
Sbjct: 1085 SKKIDVMLWDVNG 1097



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 92/248 (37%), Gaps = 29/248 (11%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  PR S  +Q++       +DI R+  +         R+      +L   FS +GK   
Sbjct: 567 VIVPRVSAKKQQL------KQDIQRLLELGLVSINERNRLIVSEQKVLDVTFSHDGKWLA 620

Query: 274 ISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            +  KD  + ++  DLQ    + L+   +        S+SPD   +   S   GK  L+ 
Sbjct: 621 -TTSKDGQIKLW--DLQGKLIQSLSEDNSEKSYFWRTSFSPDDQLLAAAST-SGKINLWS 676

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSP----------QGDLIAFTKFSGEKFA---IGVMK 377
           ++ N   + +     +   FD  + P           G  I   +F+GE+F    I  + 
Sbjct: 677 LKDNQIKKLKSLVGHQGWIFDVKFHPTQPILASVSSDGT-IKLWRFNGEEFQDKPIESVD 735

Query: 378 KDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPA 435
               +Q+    E   ++   +SP G+ L  +      +    + ++ +   N+  + T  
Sbjct: 736 VSEINQKNRTNEKPVIRTLRFSPDGKILATATDNGKTSNDPGIITLWIFKDNKLKLLTAF 795

Query: 436 YASDPQWV 443
                 W+
Sbjct: 796 PEKHNDWI 803



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 102/296 (34%), Gaps = 43/296 (14%)

Query: 154 IAHTISDDIYQSITGEKGDFNS---------RILFVSESVVSGIIKNSLCVMDRDGA--- 201
           IA+   D + + ++  K    +         +++    S     +K  +  +   G    
Sbjct: 535 IANRAFDALVEDLSAYKKFKQTEQDLSIKLLQVIVPRVSAKKQQLKQDIQRLLELGLVSI 594

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R      +Q + +  FS + + +A  + D    ++++ +  ++ ++     + +S   
Sbjct: 595 NERNRLIVSEQKVLDVTFSHDGKWLATTSKD--GQIKLWDLQGKLIQSLSEDNSEKSYFW 652

Query: 262 APRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFES 320
              FS +  + L +      ++++S+ D Q    + L           + P    +   S
Sbjct: 653 RTSFSPD-DQLLAAASTSGKINLWSLKDNQIKKLKSLVGHQGWIFDVKFHPTQPILASVS 711

Query: 321 DREGKEQLYVMQ--------SNGSDQKRISQDKEAS----YFDPVWSPQGDLIAF----- 363
             +G  +L+               D   I+Q    +         +SP G ++A      
Sbjct: 712 S-DGTIKLWRFNGEEFQDKPIESVDVSEINQKNRTNEKPVIRTLRFSPDGKILATATDNG 770

Query: 364 -TKFSGEKFAIGVMKKDGSQERLLV-----EDSNLQAPTWSPSGRSLIFSRKKDGD 413
            T        + + K +  + +LL       +  +    +S  G+ L  +  +DG 
Sbjct: 771 KTSNDPGIITLWIFKDN--KLKLLTAFPEKHNDWIWDINFSHDGKMLA-TASRDGT 823



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 64/187 (34%), Gaps = 26/187 (13%)

Query: 253  IGNFRSMILAPRFSSNGKRAL---ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-- 307
            +      +++  FS +G++           + +D+   D+     + +     +  +   
Sbjct: 1056 LQEDPDKVISLSFSPDGQKLATARWVRVNSKKIDVMLWDVNG-LEKPIQKFPSLQTNWLK 1114

Query: 308  --SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD------KEASYFDPVWSPQGD 359
               +S D S I   S ++G  +L+    NG DQ     +        ++     +SP   
Sbjct: 1115 DIDFSADGSMIA-TSSKDGTVKLW--SLNGEDQTPYQNNYPKINHNNSTISSVSFSP-IQ 1170

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             +  T    +   +  +     + +         + + T+SP+G+ +        D    
Sbjct: 1171 PLLLTASDDQTVKLWTID---GKLQQTFFGHQGAVLSATFSPNGQFIA---SSGSDGKVI 1224

Query: 418  LYSIDLN 424
            L+  DL 
Sbjct: 1225 LWKRDLT 1231



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 117/339 (34%), Gaps = 42/339 (12%)

Query: 114 GRVIKEGKDRLRVEFR-LWDVK---DRKQIIGKKFFSSPASWR---KIAHTISDDIYQSI 166
           G V    ++RL V  + + DV    D K +           W    K+  ++S+D  +  
Sbjct: 590 GLVSINERNRLIVSEQKVLDVTFSHDGKWLATTSKDGQIKLWDLQGKLIQSLSEDNSEKS 649

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
              +  F+     ++ +  SG  K +L  +  +              +F+ +F P Q  +
Sbjct: 650 YFWRTSFSPDDQLLAAASTSG--KINLWSLKDNQIKKLKSLVGHQGWIFDVKFHPTQPIL 707

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRI----------GNFRSMILAPRFSSNGKRALISV 276
           A  + D    L  +  +   D+  + +           N + +I   RFS +GK    + 
Sbjct: 708 ASVSSDGTIKLWRFNGEEFQDKPIESVDVSEINQKNRTNEKPVIRTLRFSPDGKILATAT 767

Query: 277 QKD------EAMDIYSVDLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGKE 326
                      + ++    + N  + LT             ++S D   +   + R+G  
Sbjct: 768 DNGKTSNDPGIITLWIF--KDNKLKLLTAFPEKHNDWIWDINFSHDGKMLA-TASRDGTV 824

Query: 327 QLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +L+     G + K +             ++  + ++I       +         +G +  
Sbjct: 825 KLW--NLEGQELKSMGEHNVPFTGVNFAIYGQKKEIIVIGASHDKTIKFW--NLEGKELT 880

Query: 385 LLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            L    S +    +S  G++L  + +   D   KL++++
Sbjct: 881 TLKGHQSAIWRAIFSSDGKTLASASE---DGTVKLWTLN 916


>gi|209524278|ref|ZP_03272828.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
 gi|209495369|gb|EDZ95674.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
          Length = 704

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 84/235 (35%), Gaps = 11/235 (4%)

Query: 166 ITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           +TG  G  NS  +     V  SG   N++ + D             ++ +    FS + Q
Sbjct: 459 LTGHGGAINSIAISPDGRVIASGSRDNTVKLWDLHSKQEIATLKGHERDITTIAFSRDGQ 518

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +A  ++D      + L     +     +      I A  FS NG+    S  +D  + +
Sbjct: 519 TLASGSHDH----TITLWYLGTNELIGTLRGHNREIRAVAFSPNGRLLA-SASQDNTVKL 573

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + ++ +   +  L++   +N  A +S D   ++  S     + L +      +       
Sbjct: 574 WDLNRREEISTLLSHDNSVNAIA-FSRDGQTLISGSS---DKTLKLWDVTTKEVMATLHG 629

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                     SP G +IA +    +   +  +K   +   L    S ++A  +SP
Sbjct: 630 HSQGIKSIAVSPDGRIIA-SGGDDDTVQLWDLKNQEAIATLRGHSSKIEAIAFSP 683



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 81/255 (31%), Gaps = 23/255 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG   N++ +                  +     SP+ + +A  + D+     V L
Sbjct: 434 KTLASGSDDNTVRLWSLQTFEHLSTLTGHGGAINSIAISPDGRVIASGSRDN----TVKL 489

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +    +      I    FS +G+    S   D  + ++ +       E +    
Sbjct: 490 WDLHSKQEIATLKGHERDITTIAFSRDGQTLA-SGSHDHTITLWYL----GTNELIGTLR 544

Query: 302 FINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             N      ++SP+   +   S       + +   N  ++       + S     +S  G
Sbjct: 545 GHNREIRAVAFSPNGRLLASASQ---DNTVKLWDLNRREEISTLLSHDNSVNAIAFSRDG 601

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +  +  S +   +  +        L      +++   SP GR +        D   +L
Sbjct: 602 QTLI-SGSSDKTLKLWDVTTKEVMATLHGHSQGIKSIAVSPDGRIIA---SGGDDDTVQL 657

Query: 419 YSIDLNGRNETLINT 433
           + +    +N+  I T
Sbjct: 658 WDL----KNQEAIAT 668



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 66/183 (36%), Gaps = 15/183 (8%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R  + +    + +L    + +GK    S   D  + ++S+         LT       S 
Sbjct: 412 RLGQTLTGHTARVLTVAITPDGKTLA-SGSDDNTVRLWSLQ-TFEHLSTLTGHGGAINSI 469

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + SPD   I   S R+   +L+    +   +    +  E       +S  G  +A     
Sbjct: 470 AISPDGRVIASGS-RDNTVKLW--DLHSKQEIATLKGHERDITTIAFSRDGQTLASGSHD 526

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                I +     ++    +   N +  A  +SP+GR L  + +   D   KL+  DLN 
Sbjct: 527 ---HTITLWYLGTNELIGTLRGHNREIRAVAFSPNGRLLASASQ---DNTVKLW--DLNR 578

Query: 426 RNE 428
           R E
Sbjct: 579 REE 581



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 5/107 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++++SG    +L + D     +        Q +     SP+ + +A       D   V L
Sbjct: 602 QTLISGSSDKTLKLWDVTTKEVMATLHGHSQGIKSIAVSPDGRIIA----SGGDDDTVQL 657

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            D +   A   +    S I A  FS   +  L+S   +  ++I+ + 
Sbjct: 658 WDLKNQEAIATLRGHSSKIEAIAFSPK-RPLLVSGSHNRNLEIWQIP 703


>gi|145538483|ref|XP_001454945.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124422726|emb|CAK87548.1| unnamed protein product [Paramecium tetraurelia]
          Length = 682

 Score = 67.7 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 62/158 (39%), Gaps = 11/158 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ SG   NS+ + D      +         ++   FSP+   +A  + D+     + L 
Sbjct: 518 TLASGSYDNSIRLWDVKTGQQKAKLDGHSNTVYSVNFSPDGTTLASGSADN----SIRLW 573

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTL 301
           D +      ++    + IL+  FS +G     S   D ++ ++  D+++   + +L    
Sbjct: 574 DVKTGSQKAKLDGHSNGILSVNFSPDGTTLA-SGSLDNSIRLW--DVKTGQQKAKLDGHS 630

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               S ++SPD + +   S   G   + +       QK
Sbjct: 631 SCVNSVNFSPDGTTLASGS---GDNSIRLWDKKTGQQK 665



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 63/165 (38%), Gaps = 14/165 (8%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +A  +YD+     + L D +  +   ++    + + +  FS +G     S   D 
Sbjct: 514 PDGTTLASGSYDN----SIRLWDVKTGQQKAKLDGHSNTVYSVNFSPDGTTLA-SGSADN 568

Query: 281 AMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++ ++  D+++ + + +L       +S ++SPD + +   S       + +       QK
Sbjct: 569 SIRLW--DVKTGSQKAKLDGHSNGILSVNFSPDGTTLASGSL---DNSIRLWDVKTGQQK 623

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                  +      +SP G  +A          I +  K   Q++
Sbjct: 624 AKLDGHSSCVNSVNFSPDGTTLASGSGDNS---IRLWDKKTGQQK 665



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 55/139 (39%), Gaps = 11/139 (7%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +         ++   FSP+   +A  + D+     + L D +  +   ++    + + 
Sbjct: 242 NKKTKLDGHSHYVYSVNFSPDGTTLASGSSDN----SIRLWDVKTGQQKAKLDGHTNWVH 297

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFES 320
           +  FS +G     S   D ++ ++  D+++   + +L        S ++SPD + +   S
Sbjct: 298 SVNFSPDGTTLA-SGSADNSIRLW--DVKTGQQKAKLDGQTNWVHSVNFSPDGTTLASGS 354

Query: 321 DREGKEQLYVMQSNGSDQK 339
           D    + + +       QK
Sbjct: 355 D---NKSIRLWDVKTGQQK 370



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 59/179 (32%), Gaps = 30/179 (16%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  +Q                 H  S+ +Y       G     
Sbjct: 517 TTLASGSYDNSIRLWDVKTGQQKAKLD-----------GH--SNTVYSVNFSPDG----- 558

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG   NS+ + D    + +         +    FSP+   +A  + D+   
Sbjct: 559 -----TTLASGSADNSIRLWDVKTGSQKAKLDGHSNGILSVNFSPDGTTLASGSLDN--- 610

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             + L D +  +   ++    S + +  FS +G     S   D ++ ++  D ++   +
Sbjct: 611 -SIRLWDVKTGQQKAKLDGHSSCVNSVNFSPDGTTLA-SGSGDNSIRLW--DKKTGQQK 665



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 54/157 (34%), Gaps = 15/157 (9%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGK 325
            +G     S   D ++ ++  D+++   + +L        S ++SPD + +   S     
Sbjct: 514 PDGTTLA-SGSYDNSIRLW--DVKTGQQKAKLDGHSNTVYSVNFSPDGTTLASGS---AD 567

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +       QK              +SP G  +A          I +      Q++ 
Sbjct: 568 NSIRLWDVKTGSQKAKLDGHSNGILSVNFSPDGTTLASGSLDNS---IRLWDVKTGQQKA 624

Query: 386 LVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
            ++  +    +  +SP G +L       GD   +L+ 
Sbjct: 625 KLDGHSSCVNSVNFSPDGTTLA---SGSGDNSIRLWD 658



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 50/142 (35%), Gaps = 10/142 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLF 302
            R D    ++      + +  FS +G     S   D ++ ++  D+++   + +L     
Sbjct: 238 LRQDNKKTKLDGHSHYVYSVNFSPDGTTLA-SGSSDNSIRLW--DVKTGQQKAKLDGHTN 294

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++SPD + +   S       + +       QK     +        +SP G  +A
Sbjct: 295 WVHSVNFSPDGTTLASGS---ADNSIRLWDVKTGQQKAKLDGQTNWVHSVNFSPDGTTLA 351

Query: 363 FTKFSGEKFAIGVMKKDGSQER 384
                 +  +I +      Q++
Sbjct: 352 ---SGSDNKSIRLWDVKTGQQK 370



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 48/152 (31%), Gaps = 11/152 (7%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + +Y +  Q N   +L        S ++SPD + +   S       + +       QK 
Sbjct: 231 TLSVYGMLRQDNKKTKLDGHSHYVYSVNFSPDGTTLASGSS---DNSIRLWDVKTGQQKA 287

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWS 398
                        +SP G  +A          I +      Q++  ++       +  +S
Sbjct: 288 KLDGHTNWVHSVNFSPDGTTLASGSADNS---IRLWDVKTGQQKAKLDGQTNWVHSVNFS 344

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           P G +L        +   +L+ +    +   L
Sbjct: 345 PDGTTLASGSD---NKSIRLWDVKTGQQKAKL 373



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 41/113 (36%), Gaps = 7/113 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ SG   NS+ + D      +         +    FSP+   +A  + D+     + L 
Sbjct: 265 TLASGSSDNSIRLWDVKTGQQKAKLDGHTNWVHSVNFSPDGTTLASGSADN----SIRLW 320

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           D +  +   ++    + + +  FS +G          +   I   D+++   +
Sbjct: 321 DVKTGQQKAKLDGQTNWVHSVNFSPDGTTLA---SGSDNKSIRLWDVKTGQQK 370



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 41/120 (34%), Gaps = 7/120 (5%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD + +   S       + +       QK        + +   +SP G  +A +  +   
Sbjct: 514 PDGTTLASGSY---DNSIRLWDVKTGQQKAKLDGHSNTVYSVNFSPDGTTLA-SGSADNS 569

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             +  +K    + +L    + + +  +SP G +L        D   +L+ +    +   L
Sbjct: 570 IRLWDVKTGSQKAKLDGHSNGILSVNFSPDGTTLA---SGSLDNSIRLWDVKTGQQKAKL 626



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 43/150 (28%), Gaps = 27/150 (18%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  +Q                 HT  + ++       G     
Sbjct: 264 TTLASGSSDNSIRLWDVKTGQQKAKLD-----------GHT--NWVHSVNFSPDG----- 305

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG   NS+ + D      +     +   +    FSP+   +A       D 
Sbjct: 306 -----TTLASGSADNSIRLWDVKTGQQKAKLDGQTNWVHSVNFSPDGTTLA----SGSDN 356

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             + L D +  +   ++G      L    S
Sbjct: 357 KSIRLWDVKTGQQKAKLGWSFMGQLLQSIS 386


>gi|325048885|dbj|BAJ79311.1| putative S9 family peptidase [Rhodococcus erythropolis]
          Length = 678

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 82/265 (30%), Gaps = 30/265 (11%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + V S      +  M   G  +R+               P+   +  A  D ++ + +  
Sbjct: 155 DQVRSARKDKKVTAMLHTGYPVRHWDHDLG---------PDHPHLVVAETDSKESVELRD 205

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNATER 296
           +      A +              S +G   + +    +A       +  +D  +     
Sbjct: 206 ITPTAGAALRETST--------TISDDGLFVVTTWTVGDASAARRSTLVRIDTVTGDRVT 257

Query: 297 LTNTLFINI-SASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDKEASY 349
           L +    ++ +   SPD +++ F  +         +  L +          ++   +   
Sbjct: 258 LVDEADADVYNPVLSPDGTKLAFIRETLTTPESAPRMTLQLYDFGSGAVTGVADGWDRWP 317

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               W P G  +  T   G +  I  +   G   RL  +D+       +P G S+ ++ +
Sbjct: 318 TSLAWLPDGSGLVVTADDGGRGPIFTIDLWGQPVRLTADDAAYTDVRVAPDGESI-YALR 376

Query: 410 KDGDTGSKLYSIDLNGRNETLINTP 434
              +    +  +DL     T +  P
Sbjct: 377 ASYEAPPHVVRVDLRSGEITALRGP 401



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 64/209 (30%), Gaps = 7/209 (3%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++ +         R I  T    + ++ T    D    +   +    S   +++L  +D 
Sbjct: 191 VVAETDSKESVELRDITPTAGAALRETSTTISDDGLFVVTTWTVGDASAARRSTLVRIDT 250

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNF 256
              +   L    D  ++ P  SP+  K+A+   T    +      +      +    G  
Sbjct: 251 VTGDRVTLVDEADADVYNPVLSPDGTKLAFIRETLTTPESAPRMTLQLYDFGSGAVTGVA 310

Query: 257 RSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                 P    +  +G   +++        I+++DL      RLT           +PD 
Sbjct: 311 DGWDRWPTSLAWLPDGSGLVVTADDGGRGPIFTIDL-WGQPVRLTADDAAYTDVRVAPDG 369

Query: 314 SQI-VFESDREGKEQLYVMQSNGSDQKRI 341
             I    +  E    +  +     +   +
Sbjct: 370 ESIYALRASYEAPPHVVRVDLRSGEITAL 398



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 80/296 (27%), Gaps = 74/296 (25%)

Query: 220 SPNQQKV--AYATYDDEDILRV---YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+   +  A A  DD+    V   + +D    R  +R+    +      F+ +G     
Sbjct: 32  SPDGSLLICARAVLDDKSAEYVSSLWEIDPEGRRPARRLTWGSTSESGAAFAFDGDVLFT 91

Query: 275 SVQK-----DEAMDIYSVDLQSNATERLTNTLFINIS-------ASYSPDSSQIV----- 317
           + +      D    ++ +       + L +      S        ++   +S +      
Sbjct: 92  ATRAVPGESDPQPALWRLPAAGGEAQLLISRPGGVSSVSAAKAAPTFVAQTSVMASAISL 151

Query: 318 -----FESDREGK-----------------------EQLYVMQSNGSDQKRI-----SQD 344
                  S R+ K                         L V +++  +   +     +  
Sbjct: 152 DQDDQVRSARKDKKVTAMLHTGYPVRHWDHDLGPDHPHLVVAETDSKESVELRDITPTAG 211

Query: 345 KEASYFDPVWSPQGDLIAFTKFSG-----EKFAIGVMKKDGSQERLLVE--DSNLQAPTW 397
                     S  G  +  T   G      +  +  +         LV+  D+++  P  
Sbjct: 212 AALRETSTTISDDGLFVVTTWTVGDASAARRSTLVRIDTVTGDRVTLVDEADADVYNPVL 271

Query: 398 SPSGRSLIFSR------KKDGDTGSKLYSIDLNGRNETLINTPAYASDP---QWVG 444
           SP G  L F R      +       +LY     G          +   P    W+ 
Sbjct: 272 SPDGTKLAFIRETLTTPESAPRMTLQLYDF---GSGAVTGVADGWDRWPTSLAWLP 324


>gi|269836688|ref|YP_003318916.1| hypothetical protein Sthe_0657 [Sphaerobacter thermophilus DSM
           20745]
 gi|269785951|gb|ACZ38094.1| hypothetical protein Sthe_0657 [Sphaerobacter thermophilus DSM
           20745]
          Length = 481

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 96/286 (33%), Gaps = 49/286 (17%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L ++  DG     L       +  P ++ +   + YA YD      + ++D      
Sbjct: 192 EIRLVLLPVDGGEPLTLPGG---AVTLPEWTADGSGIVYARYDGGPDPVLTMVDRAGTVV 248

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISAS 308
            + +G       AP    +G   +    +  A+    V    +    RL +      S  
Sbjct: 249 WREVG-GEVHGYAPV--PDGVLIV----RSGALWHIPVGATGDVTARRLIDLPAGWSSGV 301

Query: 309 YSPD--SSQIVFE--SDREGKEQLYVMQSNGSDQKR---------ISQDKEASYFDP--- 352
            +PD   +++ +   SD      L +   +    +R         I +D + ++  P   
Sbjct: 302 LAPDPSGNRLAYTCGSD------LCLFDRSTGWSQRVELPYPEPGIVRDPDGTWRPPSRG 355

Query: 353 -----------VWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWS 398
                       WSP G  +A        +  + +  +DGS  +   L  D  +  P W+
Sbjct: 356 RAHVLNLKLRIAWSPDGQRVALVQSDQNARPLLLLFDRDGSLVQRIPLGPDGWVVDPQWT 415

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           P    L+F +    + G +L  +D +      ++ P + +      
Sbjct: 416 PDSE-LLFLQTYPAN-GRRLVVVDADSGVVYDLSQPGWHASGSLSP 459



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/301 (14%), Positives = 80/301 (26%), Gaps = 37/301 (12%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ---- 223
                  +R+L +            +  +  DG +              P +        
Sbjct: 64  PVSPLAEARVLDIERGGRGEYDAALIRFIYEDGRSRDVRVWLSHPYRLRPGWQYTGLDRY 123

Query: 224 ----QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-------RFSSNGKRA 272
               +++     D  D         R+D A            +P        +S  G   
Sbjct: 124 NTPHEELPGLLLDSPDAPVRLGTPRRLDHADPVFTGVAGFDSSPPGGVDRLIWSPQGDAV 183

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           ++S      + +  + +       LT          ++ D S IV+     G + +  M 
Sbjct: 184 IVSQGIPHEIRLVLLPVDGGEP--LTLPGGAVTLPEWTADGSGIVYARYDGGPDPVLTMV 241

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSN 391
                   + ++           P G LI     SG  + I V        R L++  + 
Sbjct: 242 DRAGTV--VWREVGGEVHGYAPVPDGVLIV---RSGALWHIPVGATGDVTARRLIDLPAG 296

Query: 392 LQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLI----NTPAYASDP--QWV 443
             +   +P   G  L ++       GS L   D +      +      P    DP   W 
Sbjct: 297 WSSGVLAPDPSGNRLAYT------CGSDLCLFDRSTGWSQRVELPYPEPGIVRDPDGTWR 350

Query: 444 G 444
            
Sbjct: 351 P 351



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 45/119 (37%), Gaps = 6/119 (5%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +  ++     V+        +  L + DRDG+ ++ +    D  + +P+++P+  ++ + 
Sbjct: 365 RIAWSPDGQRVALVQSDQNARPLLLLFDRDGSLVQRIPLGPDGWVVDPQWTPD-SELLFL 423

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                +  R+ ++D           +      +   S  G R +++        ++ V 
Sbjct: 424 QTYPANGRRLVVVDADSGVVYDL--SQPGWHASGSLSPAGDRLIVT---GWEPALWVVP 477


>gi|222100617|ref|YP_002535185.1| hypothetical protein CTN_1643 [Thermotoga neapolitana DSM 4359]
 gi|221573007|gb|ACM23819.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
          Length = 389

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/266 (18%), Positives = 96/266 (36%), Gaps = 22/266 (8%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y     E  DF+S     S   +SG     L ++DR   ++  L        + PR S +
Sbjct: 132 YHPALDEYSDFSSEYFVFSSERLSGNRN--LFLIDRKNGDLLSLPVYGSS-EYFPRISLD 188

Query: 223 QQKVAYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           Q+ + +      +    Y+ +        K I   R     P +  +    +   +   +
Sbjct: 189 QKYLLFQGSLHGNWGIYYMPISKDYSSKIKLISRGRFAAYNPNW-LDENTMVYVQEDATS 247

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSP----DSSQIVFESDREGKEQLYVMQSNGSD 337
             +   DL +   +  T  L  +    ++P    D   IVF   +E    +Y +  +G+ 
Sbjct: 248 NHLVVKDLVTMREK--TYDLPFDW--VFTPVKGRDG--IVFVGLKESDFGIYELLPDGTV 301

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAP 395
              + ++   + FDP     G+ + F+      F I     +  +   L E    +   P
Sbjct: 302 T--VLENSPYNEFDPDV--FGNYLIFSSNRDGVFRIYAKDLESGKVWCLTEKIPYDAFYP 357

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +S  G+ + FS  + G +   ++ +
Sbjct: 358 AFSEDGKLVAFSVYEKG-SEPDIWIV 382



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 76/212 (35%), Gaps = 14/212 (6%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            +   + + L    S+        + +     + I+ ++  R    + P +  ++  + Y
Sbjct: 183 PRISLDQKYLLFQGSLHGNWGIYYMPISKDYSSKIKLISRGR-FAAYNPNW-LDENTMVY 240

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
              D        ++   +    K        +  P    +G   +    K+    IY + 
Sbjct: 241 VQEDA--TSNHLVVKDLVTMREKTYDLPFDWVFTPVKGRDG--IVFVGLKESDFGIYEL- 295

Query: 289 LQSNATERLTNTLFINISASYSPD--SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           L       L N+ +      + PD   + ++F S+R+G  ++Y           +++   
Sbjct: 296 LPDGTVTVLENSPYNE----FDPDVFGNYLIFSSNRDGVFRIYAKDLESGKVWCLTEKIP 351

Query: 347 ASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMK 377
              F P +S  G L+AF+ +  G +  I +++
Sbjct: 352 YDAFYPAFSEDGKLVAFSVYEKGSEPDIWIVR 383


>gi|145508622|ref|XP_001440258.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407469|emb|CAK72861.1| unnamed protein product [Paramecium tetraurelia]
          Length = 527

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 89/233 (38%), Gaps = 19/233 (8%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            + I   KG   S  L  + + ++   K  + + +      +         +    FS +
Sbjct: 234 MKQIVKGKGVVKSLCLSPNNTTLAFSRKQCVYLWNLKTRKQKAKLDGHLDEIRSVCFSQD 293

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              +A ++YD      + L D +I +   ++    + + +  FS +G     S   D+++
Sbjct: 294 GTTLASSSYDK----SIRLWDVKIKQQKAKLDGHSNRVYSVNFSPDGTTLA-SGSLDKSI 348

Query: 283 DIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQK 339
            ++  D+++   + +L       +S ++SPD + +       G     + +       QK
Sbjct: 349 LLW--DVKTGQQKAKLDGHQDYVLSVNFSPDGTTLA-----SGNYDKSILLWDVKTGQQK 401

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                   S     +SP G  +A +  + +   +  +K   S++++L  + N 
Sbjct: 402 AKLDGHSYSVQQVCFSPDGSTLA-SGSADKSIRLWDVK---SKQQILSSNFNY 450



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 85/235 (36%), Gaps = 24/235 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                Q +    FSP+ + +A  + D+     + L D +  +  K+I   + ++ +   S
Sbjct: 196 LDGHSQGVNLVCFSPDGKSLASCSDDN----SIILWDIKTGKM-KQIVKGKGVVKSLCLS 250

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGK 325
            N      S ++     +Y  +L++   + +L   L    S  +S D + +   S     
Sbjct: 251 PNNTTLAFSRKQC----VYLWNLKTRKQKAKLDGHLDEIRSVCFSQDGTTLASSSY---D 303

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + +       QK          +   +SP G  +A          I +      Q++ 
Sbjct: 304 KSIRLWDVKIKQQKAKLDGHSNRVYSVNFSPDGTTLASGSLDKS---ILLWDVKTGQQKA 360

Query: 386 LVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYA 437
            ++       +  +SP G +L       G+    +   D+  G+ +  ++  +Y+
Sbjct: 361 KLDGHQDYVLSVNFSPDGTTLA-----SGNYDKSILLWDVKTGQQKAKLDGHSYS 410



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 88/243 (36%), Gaps = 21/243 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            NS+ + D     ++ +   +  +      SPN   +A++         VYL + +  + 
Sbjct: 221 DNSIILWDIKTGKMKQIVKGKGVVKSL-CLSPNNTTLAFS-----RKQCVYLWNLKTRKQ 274

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             ++      I +  FS +G     S   D+++ ++ V ++    + L        S ++
Sbjct: 275 KAKLDGHLDEIRSVCFSQDGTTLA-SSSYDKSIRLWDVKIKQQKAK-LDGHSNRVYSVNF 332

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD + +   S     + + +       QK      +       +SP G  +A   +   
Sbjct: 333 SPDGTTLASGSL---DKSILLWDVKTGQQKAKLDGHQDYVLSVNFSPDGTTLASGNYDKS 389

Query: 370 KFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              I +      Q++  ++    ++Q   +SP G +L       G     +   D+  + 
Sbjct: 390 ---ILLWDVKTGQQKAKLDGHSYSVQQVCFSPDGSTLA-----SGSADKSIRLWDVKSKQ 441

Query: 428 ETL 430
           + L
Sbjct: 442 QIL 444



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 66/165 (40%), Gaps = 9/165 (5%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             + +I    K  G+ + + L   FS +GK    S   D ++ ++  D+++   +++   
Sbjct: 185 WKNIKIHELNKLDGHSQGVNL-VCFSPDGKSLA-SCSDDNSIILW--DIKTGKMKQIVKG 240

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             +  S   SP+++ + F      K+ +Y+       QK              +S  G  
Sbjct: 241 KGVVKSLCLSPNNTTLAFSR----KQCVYLWNLKTRKQKAKLDGHLDEIRSVCFSQDGTT 296

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +A + +  +   +  +K    + +L    + + +  +SP G +L 
Sbjct: 297 LASSSYD-KSIRLWDVKIKQQKAKLDGHSNRVYSVNFSPDGTTLA 340



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 65/195 (33%), Gaps = 30/195 (15%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK ++Q                 H  S+ +Y       G     
Sbjct: 295 TTLASSSYDKSIRLWDVKIKQQKAKLD-----------GH--SNRVYSVNFSPDG----- 336

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG +  S+ + D      +         +    FSP+   +A   YD    
Sbjct: 337 -----TTLASGSLDKSILLWDVKTGQQKAKLDGHQDYVLSVNFSPDGTTLASGNYDK--- 388

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L D +  +   ++      +    FS +G     S   D+++ ++  D++S     
Sbjct: 389 -SILLWDVKTGQQKAKLDGHSYSVQQVCFSPDGSTLA-SGSADKSIRLW--DVKSKQQIL 444

Query: 297 LTNTLFINISASYSP 311
            +N  + NI A + P
Sbjct: 445 SSNFNYRNILAQFQP 459


>gi|262196897|ref|YP_003268106.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Haliangium ochraceum DSM 14365]
 gi|262080244|gb|ACY16213.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Haliangium ochraceum DSM 14365]
          Length = 997

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 54/134 (40%), Gaps = 23/134 (17%)

Query: 260 ILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFI-------NISASYS 310
           + AP    +G     +++  + + + +Y V++     +RLT            N   ++S
Sbjct: 500 VRAPDLRHDGTTIAFAMRTAQSDPLGVYKVNIDGGGCQRLTPAEAPVGGIAIHNFDPAWS 559

Query: 311 PDSSQIVFESDREGKE-------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           PD + IVF S R G                ++ M+++GS  ++++    +     +   +
Sbjct: 560 PDGASIVFASTRGGANAPSLSRQLFLPQSDIWRMRADGSAPEQVTYLTNSELSPQMI-RE 618

Query: 358 GDLIAFTKFSGEKF 371
           G +I  T+     F
Sbjct: 619 GRIILSTEKVSSGF 632



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 29/133 (21%)

Query: 299 NTLFINI-SASYSPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEA----- 347
           +T  +++ +     D + I F     +SD  G   +Y +  +G   +R++  +       
Sbjct: 494 DTASVDVRAPDLRHDGTTIAFAMRTAQSDPLG---VYKVNIDGGGCQRLTPAEAPVGGIA 550

Query: 348 -SYFDPVWSPQGDLIAFTKFSGE-------------KFAIGVMKKDGSQERLLVEDSNLQ 393
              FDP WSP G  I F    G              +  I  M+ DGS    +   +N +
Sbjct: 551 IHNFDPAWSPDGASIVFASTRGGANAPSLSRQLFLPQSDIWRMRADGSAPEQVTYLTNSE 610

Query: 394 -APTWSPSGRSLI 405
            +P     GR ++
Sbjct: 611 LSPQMIREGRIIL 623



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 37/118 (31%), Gaps = 20/118 (16%)

Query: 217 PRFSPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKR------IGNFRSMILAPRFSSNG 269
           P    +   +A+A      D L VY ++       +       +G        P +S +G
Sbjct: 503 PDLRHDGTTIAFAMRTAQSDPLGVYKVNIDGGGCQRLTPAEAPVGGIAIHNFDPAWSPDG 562

Query: 270 KRALISVQKDEA-------------MDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              + +  +  A              DI+ +    +A E++T      +S     +  
Sbjct: 563 ASIVFASTRGGANAPSLSRQLFLPQSDIWRMRADGSAPEQVTYLTNSELSPQMIREGR 620



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 35/106 (33%), Gaps = 21/106 (19%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGV--MKKDGSQERLLVEDS--------NLQAPTW 397
               P     G  IAF   + +   +GV  +  DG   + L            +   P W
Sbjct: 499 DVRAPDLRHDGTTIAFAMRTAQSDPLGVYKVNIDGGGCQRLTPAEAPVGGIAIHNFDPAW 558

Query: 398 SPSGRSLIFSRKKDGDTG-----------SKLYSIDLNGRNETLIN 432
           SP G S++F+  + G              S ++ +  +G     + 
Sbjct: 559 SPDGASIVFASTRGGANAPSLSRQLFLPQSDIWRMRADGSAPEQVT 604



 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 10/67 (14%)

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS-------- 438
               +++AP     G ++ F+ +        +Y ++++G     + TPA A         
Sbjct: 495 TASVDVRAPDLRHDGTTIAFAMRTAQSDPLGVYKVNIDGGGCQRL-TPAEAPVGGIAIHN 553

Query: 439 -DPQWVG 444
            DP W  
Sbjct: 554 FDPAWSP 560


>gi|149175607|ref|ZP_01854227.1| WD40-repeat containing protein [Planctomyces maris DSM 8797]
 gi|148845592|gb|EDL59935.1| WD40-repeat containing protein [Planctomyces maris DSM 8797]
          Length = 1766

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/277 (16%), Positives = 89/277 (32%), Gaps = 37/277 (13%)

Query: 130  LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            LW +   KQ+              + H  ++ IY +     G           ++V+G  
Sbjct: 1460 LWSLATGKQMGNS-----------LKH--AEAIYDAAFSPNG----------RTIVTGSE 1496

Query: 190  KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              +  + D             D ++    F P+ +KVA  ++D      V L D      
Sbjct: 1497 DKTARLWDTVTTKPIGKVLQHDDLVTRVAFCPDGKKVASGSWDQ----TVRLWDAATGEP 1552

Query: 250  PKRIGNFRSMILAPRFSSNGKRAL-ISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                    + I A  FS +GK+   ++       D+ +        +           A+
Sbjct: 1553 ADEPFQHTASIEAILFSPDGKKMFTLAGSSGHVWDLETHKQIGKPLK----HGSFTRGAA 1608

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             SPD   +      +G   +Y+  +  +    I Q +E       +SP G  +    +  
Sbjct: 1609 LSPDGKLLA-TGCLDGS--VYLWDALTAAPVAILQQEEG-VNTVAFSPDGKTLV-AGYRD 1663

Query: 369  EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                +  +     + R +  D+ +    +SP G  + 
Sbjct: 1664 GFARLWELSTGKVKARPMEHDNEVLTVRFSPDGNLVA 1700



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 57/319 (17%), Positives = 113/319 (35%), Gaps = 46/319 (14%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           LVTG    +         +LWDV   KQ   K  F  P                    EK
Sbjct: 84  LVTGSWDDKSA-------KLWDVASGKQKGKKLQFRGPV-------------------EK 117

Query: 171 GDFNSRILFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
             F+     V  +   G  +   +    + G  + +L+     I+    F+P+ + +   
Sbjct: 118 IVFSPDAESVVVASHDGSAQIVDVASSKQKGKKLHHLSGRVSDIV----FTPDGKTLI-- 171

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +   +  ++ +  +T      K +   +  +L+   + +GK    +  K+    +Y  D+
Sbjct: 172 SGGTDSTVQFWDAETGELDEDKEL-KLKGPVLSLAITPDGKTL-FAASKN---VVYVCDV 226

Query: 290 QSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +      E L        +   SPD   + F S   GK+ L V    G + K+ S   E+
Sbjct: 227 EKGELAGEPLEKGKSYIKAMLLSPDGKTL-FTS--TGKDYLEVWDVPGRNLKKESYRLES 283

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI-- 405
           +      S  G  +  T     K     + ++  +E  L     ++   ++P  +S++  
Sbjct: 284 NIKAIAISADGKTLL-TGTKAGKVHFWDLTRNERKEEPLKYTGEVETLAFTPEDKSVLVE 342

Query: 406 FSRKKDGDTGSKLYSIDLN 424
           +  +KD      L+ +  +
Sbjct: 343 YMDRKDWKNSHVLWDLSGD 361



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 59/377 (15%), Positives = 109/377 (28%), Gaps = 56/377 (14%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +++  + RS ++++        +  + DS+     ++  G + + TG    +        
Sbjct: 566 ILTGGMNRSQLWDMT-TGRPIGQPLSQDSLVTVLAFSPDG-KTMATGGWSPQA------- 616

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             LWDV  +K         SP       H             K    +  +      +SG
Sbjct: 617 -FLWDVATQKV------KGSP-----CVHKGIVQAMAFSRDGKTLLTAGSVLNISDALSG 664

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
           +   ++ + D +           ++ + +   SP+ + V     D        L D    
Sbjct: 665 VKDKNVHLWDAETGKPLGKAFHHEESIEKLAVSPDGKLVLTGCKDH----SAMLWDMETR 720

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATE---------- 295
           R         + I    FS +GK  L +          I  + L   A E          
Sbjct: 721 RPVAGPIRHGASITDVAFSPDGKSILTASSDTTVRVWKISEIPLSKEAAEYDPEKYNKQM 780

Query: 296 -------RLT----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
                  +LT              +SPD   +   SD        +      +Q      
Sbjct: 781 KWDVSSDQLTVDVLKHRDEVKDIVFSPDGKLLASGSD---DYTARLWDVETGEQVGEPLK 837

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            E       ++P G  +  T   GE      +K        L   S ++    SP G+ L
Sbjct: 838 HEYYVNAVAFTPDGKTLI-TGDDGEFLNFWDVKTGTRSGDSLELSSEVRQLAISPDGKML 896

Query: 405 IFSRKKDGDTGSKLYSI 421
                 D     +L+ +
Sbjct: 897 ATVSGYD----VQLWDV 909



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/317 (14%), Positives = 99/317 (31%), Gaps = 43/317 (13%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V + G   + V    WD+   KQ             + +A           T + G  + 
Sbjct: 477 VTRCGDGTVYV----WDLTSGKQ------QGEAIQNKYLA-----------TVQFGTDSQ 515

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            ++  S S+        +   D      +         +F    SP+ + +         
Sbjct: 516 TLILASASLKPNPNVERVWKWDLATNQSKGDLLQGQGSVFSMALSPDGKTIL-----TGG 570

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           + R  L D    R   +  +  S++    FS +GK          +   +  D+ +   +
Sbjct: 571 MNRSQLWDMTTGRPIGQPLSQDSLVTVLAFSPDGKTMA---TGGWSPQAFLWDVATQKVK 627

Query: 296 RLTN-TLFINISASYSPDSSQIVFE------SDR-EG--KEQLYVMQSNGSDQKRISQDK 345
                   I  + ++S D   ++        SD   G   + +++  +        +   
Sbjct: 628 GSPCVHKGIVQAMAFSRDGKTLLTAGSVLNISDALSGVKDKNVHLWDAETGKPLGKAFHH 687

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           E S      SP G L+           +  M+        +   +++    +SP G+S++
Sbjct: 688 EESIEKLAVSPDGKLVLTGCKDHSAM-LWDMETRRPVAGPIRHGASITDVAFSPDGKSIL 746

Query: 406 FSRKKDGDTGSKLYSID 422
            +     DT  +++ I 
Sbjct: 747 TASS---DTTVRVWKIS 760



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 60/366 (16%), Positives = 124/366 (33%), Gaps = 84/366 (22%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQI---IGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
            G+++  G D      RLWDV+  +Q+   +  +++ +  +        + D    ITG+ 
Sbjct: 809  GKLLASGSDDYTA--RLWDVETGEQVGEPLKHEYYVNAVA-------FTPDGKTLITGDD 859

Query: 171  GDFNSRILFVSESVVSGIIK-----NSLCVMD-------RDGANIRYLTPSR-------- 210
            G+F +     + +     ++       L +           G +++     R        
Sbjct: 860  GEFLNFWDVKTGTRSGDSLELSSEVRQLAISPDGKMLATVSGYDVQLWDVERRQQIGEEL 919

Query: 211  --DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              +  ++   FSP+ + +A    +        L D    +    I      I +  FS +
Sbjct: 920  EIEPSVYAVAFSPDGKYLAVGGGELLKEGMFQLWDPVARKPLGEIIKLPKCIESLAFSPD 979

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDREGK 325
             K  L++     A  ++  D+ S   +++   +   I   SA +SPD + I+      G 
Sbjct: 980  SKSLLMTGSW-GAARLW--DVASG--KQIGKEMKPTITFESAVFSPDGTTIL-----AGG 1029

Query: 326  EQLYVMQSNGSDQKRISQDKEAS---YFDPVWSPQGD--------LIAFTKFSGEKFAIG 374
             + ++   +G  Q+RI               +SP G+        +I   K         
Sbjct: 1030 SETWMW--DGETQERIGDLFYHDAKVVKRVAFSPDGNTAVTSAESMICLWKQRDAAEKPA 1087

Query: 375  VM----------------KKDGSQERLLVEDS-NLQAP----TWSPSGRSLIFSRKKDGD 413
             +                +  GS+           + P     +SP GR ++   K   D
Sbjct: 1088 AIVEEKVTLQNTGPVEALRPGGSEIPQAFHGRLQHEGPVTSIAFSPDGRKVVTGSK---D 1144

Query: 414  TGSKLY 419
              ++L+
Sbjct: 1145 FTARLW 1150



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 72/216 (33%), Gaps = 42/216 (19%)

Query: 218 RFSPNQQKVAYAT---------------------YDDEDILRVYLMDTRIDRAPKRIGNF 256
            FSP+ + +  A+                     YD E   +    D   D+    +   
Sbjct: 737 AFSPDGKSILTASSDTTVRVWKISEIPLSKEAAEYDPEKYNKQMKWDVSSDQLTVDVLKH 796

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSS 314
           R  +    FS +GK    S   D    ++  D+++     E L +  ++N  A ++PD  
Sbjct: 797 RDEVKDIVFSPDGKLLA-SGSDDYTARLW--DVETGEQVGEPLKHEYYVNAVA-FTPDGK 852

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            ++     +  E L         +   S +  +       SP G ++A        + + 
Sbjct: 853 TLI---TGDDGEFLNFWDVKTGTRSGDSLELSSEVRQLAISPDGKMLATVS----GYDVQ 905

Query: 375 VMKKDGSQERLLVEDSNLQAPT-----WSPSGRSLI 405
           +      + R  + +     P+     +SP G+ L 
Sbjct: 906 LWDV---ERRQQIGEELEIEPSVYAVAFSPDGKYLA 938



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 59/182 (32%), Gaps = 17/182 (9%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           + +    V L   +     + +      +    FS +GK  +    +     +Y  DL S
Sbjct: 436 ETKPPTPVPLEKAKRGAMDELVFKHPRDVDQASFSPDGKLMV---TRCGDGTVYVWDLTS 492

Query: 292 NATERLTNTLFIN----ISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQ 343
              +       I      +  +  DS  ++  S         E+++      +  K    
Sbjct: 493 GKQQ----GEAIQNKYLATVQFGTDSQTLILASASLKPNPNVERVWKWDLATNQSKGDLL 548

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             + S F    SP G  I     +  +  +  M       + L +DS +    +SP G++
Sbjct: 549 QGQGSVFSMALSPDGKTILTGGMN--RSQLWDMTTGRPIGQPLSQDSLVTVLAFSPDGKT 606

Query: 404 LI 405
           + 
Sbjct: 607 MA 608



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/331 (14%), Positives = 98/331 (29%), Gaps = 75/331 (22%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWDV   KQI  +                              F S +     + +   
Sbjct: 993  RLWDVASGKQIGKE------------------------MKPTITFESAVFSPDGTTILAG 1028

Query: 189  IKNSLCVMDRDGANIRYL---TPSRDQILFEPRFSPNQQKVA------YATYDDEDIL-- 237
               +      DG     +        +++    FSP+              +   D    
Sbjct: 1029 GSET---WMWDGETQERIGDLFYHDAKVVKRVAFSPDGNTAVTSAESMICLWKQRDAAEK 1085

Query: 238  -------RVYLMDTRIDRAPKRIGN-----------FRSMILAPRFSSNGKRALISVQKD 279
                   +V L +T    A +  G+               + +  FS +G++ +++  KD
Sbjct: 1086 PAAIVEEKVTLQNTGPVEALRPGGSEIPQAFHGRLQHEGPVTSIAFSPDGRK-VVTGSKD 1144

Query: 280  EAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKE----QLYVMQS 333
                ++  +  +     +          + ++S D   +V ESD    +    ++ +   
Sbjct: 1145 FTARLW--NAVTGEPICKPW-RHRGPVTAVAFSEDGQTVVTESDDLLSQLFDKRIRLWDV 1201

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVEDSNL 392
                 K  +   +        S  G  +A +  +G + +     +K G    L+     L
Sbjct: 1202 KSGQFKTEAFPVKTQQESRSLSYDGKTLAVSTRTGTQLWDTFTQQKSGD---LIKYSFTL 1258

Query: 393  QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             A   SP  ++++        T   +Y  D+
Sbjct: 1259 HAFAVSPDRQTVV-----TDRTKRAIYQFDI 1284



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 65/216 (30%), Gaps = 20/216 (9%)

Query: 200  GANIRYLTPSR---DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
            G+ I      R   +  +    FSP+ +KV   + D        L +        +    
Sbjct: 1109 GSEIPQAFHGRLQHEGPVTSIAFSPDGRKVVTGSKD----FTARLWNAVTGEPICKPWRH 1164

Query: 257  RSMILAPRFSSNGKRALIS----VQKDEAMDIYSVDLQSNATERLTNTLFINI---SASY 309
            R  + A  FS +G+  +      + +     I   D++S   +  T    +     S S 
Sbjct: 1165 RGPVTAVAFSEDGQTVVTESDDLLSQLFDKRIRLWDVKSGQFK--TEAFPVKTQQESRSL 1222

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            S D   +   S R G +   +  +    +         +      SP    +   +    
Sbjct: 1223 SYDGKTLA-VSTRTGTQ---LWDTFTQQKSGDLIKYSFTLHAFAVSPDRQTVVTDRTKRA 1278

Query: 370  KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +   +      QE      S +    +SP G  + 
Sbjct: 1279 IYQFDIPSGQYLQEVSFTYHSRVNVVAYSPDGTLIA 1314



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 82/215 (38%), Gaps = 20/215 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +   ++DD+      L D    +   +   FR  +    FS + +  +++   
Sbjct: 77  FSPDGKTLVTGSWDDKSAK---LWDVASGKQKGKKLQFRGPVEKIVFSPDAESVVVA-SH 132

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D +  I  V       ++L +         ++PD   ++          +    +   + 
Sbjct: 133 DGSAQIVDVASSKQKGKKLHHLSGRVSDIVFTPDGKTLI---SGGTDSTVQFWDAETGE- 188

Query: 339 KRISQDKEASYFDPVWS----PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
             + +DKE     PV S    P G  + F       +   V K + + E L    S ++A
Sbjct: 189 --LDEDKELKLKGPVLSLAITPDGKTL-FAASKNVVYVCDVEKGELAGEPLEKGKSYIKA 245

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              SP G++L F+    G    +++  D+ GRN  
Sbjct: 246 MLLSPDGKTL-FTST--GKDYLEVW--DVPGRNLK 275



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 73/192 (38%), Gaps = 16/192 (8%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDI 284
           A+    +    +V     +    P+  G  +    I++  FS +GK  +     D++  +
Sbjct: 37  AFWFSLNPGPQQVKKTAPKQVVPPRFEGPLKQQKQIISAVFSPDGKTLVTGSWDDKSAKL 96

Query: 285 YSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +  D+ S     ++L           +SPD+  +V  S  +G  Q+  + S+    K++ 
Sbjct: 97  W--DVASGKQKGKKL-QFRGPVEKIVFSPDAESVVVASH-DGSAQIVDVASSKQKGKKLH 152

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQAPTWSP 399
                   D V++P G  +      G    +     +  +    + L     + +   +P
Sbjct: 153 HLS-GRVSDIVFTPDGKTLI---SGGTDSTVQFWDAETGELDEDKELKLKGPVLSLAITP 208

Query: 400 SGRSLIFSRKKD 411
            G++L F+  K+
Sbjct: 209 DGKTL-FAASKN 219



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 20/224 (8%)

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD-------DEDILRVYLMDTRI 246
             + D +   +R +    +  +      P+ + VA  + D               L+    
Sbjct: 1364 YIWDVESGLLRRMPVQHEDEVSVVAICPDGKTVATGSVDSVLLWDPKSGQPYDKLLPINR 1423

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINI 305
            +   ++  +  S I     S N  + L +   D    ++S+          L +   I  
Sbjct: 1424 EAEERKQYSHGSRIEVLLLSPNENQIL-TTAVDGTAKLWSL-ATGKQMGNSLKHAEAI-Y 1480

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             A++SP+   IV  S+    +   +  +  +         +       + P G  +A   
Sbjct: 1481 DAAFSPNGRTIVTGSE---DKTARLWDTVTTKPIGKVLQHDDLVTRVAFCPDGKKVASGS 1537

Query: 366  FSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFS 407
            +      + +      +         ++++A  +SP G+  +F+
Sbjct: 1538 WDQT---VRLWDAATGEPADEPFQHTASIEAILFSPDGKK-MFT 1577



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 100/321 (31%), Gaps = 69/321 (21%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              RLWDVK   Q   + F                            ++ + L VS    +
Sbjct: 1195 RIRLWDVKSG-QFKTEAFPVKTQQ----------------ESRSLSYDGKTLAVSTR--T 1235

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G          + G  I+Y        L     SP++Q V      D     +Y  D   
Sbjct: 1236 GTQLWDTFTQQKSGDLIKY-----SFTLHAFAVSPDRQTVV----TDRTKRAIYQFDIPS 1286

Query: 247  DRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIY------SVDLQSNATERLTN 299
             +  + +   + S +    +S +G     +  +D ++ ++          +    E++++
Sbjct: 1287 GQYLQEVSFTYHSRVNVVAYSPDGTLIA-TGSEDRSVRLWDALVREVPSREFKHEEKVSH 1345

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                    + SPD+  ++        +  Y+        +R+    E         P G 
Sbjct: 1346 -------LALSPDNRTLI----SAAGKLAYIWDVESGLLRRMPVQHEDEVSVVAICPDGK 1394

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQE--------------RLLVEDSNLQAPTWSPSGRSLI 405
             +A    +G   ++ +      Q               +     S ++    SP+   ++
Sbjct: 1395 TVA----TGSVDSVLLWDPKSGQPYDKLLPINREAEERKQYSHGSRIEVLLLSPNENQIL 1450

Query: 406  FSRKKDGDTGSKLYSIDLNGR 426
             +   DG   +KL+S+   G+
Sbjct: 1451 -TTAVDGT--AKLWSL-ATGK 1467


>gi|326778754|ref|ZP_08238019.1| peptidase S41 [Streptomyces cf. griseus XylebKG-1]
 gi|326659087|gb|EGE43933.1| peptidase S41 [Streptomyces cf. griseus XylebKG-1]
          Length = 1131

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 73/200 (36%), Gaps = 30/200 (15%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+   R+ +  PRFS +G     +  +    +I+   ++     RLT+    +     +S
Sbjct: 43  RLTVDRTRVSHPRFSPDGSSIAYTTWRTLDPEIHLAPVEGGPARRLTHWGSTDARVCGWS 102

Query: 311 PDSSQ----IVFESDREGKEQL---YVMQSNGSDQKRISQ-----------DKEASYFDP 352
           PD  +    +   S  +        Y + ++G    R+             D E      
Sbjct: 103 PDPGEACQILAVSSHNQPFSYFSWAYSVPTDGGPGGRLPWGPVSDIAVADIDGERRTLLL 162

Query: 353 VWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKK 410
             +P  +  A+ ++ G     + +       ERLL + D +L  P +   GR + F    
Sbjct: 163 TGTPPHEPAAWKRYRGGATGRLWLH-----GERLLPDIDGHLANPMFV--GRRIAFLSDH 215

Query: 411 DGDTGSKLYSIDLNGRNETL 430
           +G     LYS  ++G +   
Sbjct: 216 EG--VGNLYSCLMDGTDLRR 233



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 52/175 (29%), Gaps = 37/175 (21%)

Query: 281 AMDIYSVDLQS-----NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             D++   L +         RLT          +SPD S I + + R    ++++    G
Sbjct: 23  EDDLWVAPLAAAGHRPGRAWRLTVDRTRVSHPRFSPDGSSIAYTTWRTLDPEIHLAPVEG 82

Query: 336 SDQKRISQDKEASYFDPVWSPQ---GDLIAFTKFSGEKFAI----GVMKKDGSQERLLVE 388
              +R++           WSP       I       + F+       +  DG     L  
Sbjct: 83  GPARRLTHWGSTDARVCGWSPDPGEACQILAVSSHNQPFSYFSWAYSVPTDGGPGGRLP- 141

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QW 442
                   W P                S +   D++G   TL+ T     +P  W
Sbjct: 142 --------WGP---------------VSDIAVADIDGERRTLLLTGTPPHEPAAW 173



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 86/260 (33%), Gaps = 18/260 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAP 250
             +  RDG   R +  +    +  P    +  +VAY T  D    +   YL     DR P
Sbjct: 319 YWLTHRDG-PARTIADTPGVRVRLPEMLGSGGRVAYVTDADGPDAVEIAYLPRASGDRPP 377

Query: 251 KRIGNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           +R+   +   +    S  +G+R  I+        +  +D      E       +    S 
Sbjct: 378 RRLATGQLGRVQEMISDPDGERLAIASNDG---RLLLLDTAEPGAEAAEPAETVEKPPSG 434

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---- 365
           S  +                V +  G     + +       D  +SP GD + ++     
Sbjct: 435 STRADLHAATGAATPDSAAPVDEHPG--LTELIRSVNGPVRDLAFSPDGDWLTWSHPGVG 492

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            S  +  +  +   G+   + V +   +   P ++  GR L F   +  D    +++ DL
Sbjct: 493 RSLRQIKLARISGPGAPVIVDVTNGRFEDENPVFTEDGRYLAFLSWRGFDPVYDVHTGDL 552

Query: 424 N---GRNETLINTPAYASDP 440
           +   G    L+   +    P
Sbjct: 553 SFPLGCRPYLVPLSSATPSP 572



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 33/121 (27%), Gaps = 9/121 (7%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERL---TNTLF 302
              + I +    +    FS +G     S          I    +       +   TN  F
Sbjct: 460 GLTELIRSVNGPVRDLAFSPDGDWLTWSHPGVGRSLRQIKLARISGPGAPVIVDVTNGRF 519

Query: 303 INISASYSPDSSQIVFESDREGKEQLYV----MQSNGSDQKRISQDKEASYFDPVWSPQG 358
            + +  ++ D   + F S R       V    +      +  +     A+      SP G
Sbjct: 520 EDENPVFTEDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSPFALSPDG 579

Query: 359 D 359
            
Sbjct: 580 R 580



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 60/186 (32%), Gaps = 19/186 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ----QKVAYATYDDEDILRVYLMDTRID 247
            + +   +G   R LT           +SP+     Q +A ++++       +      D
Sbjct: 74  EIHLAPVEGGPARRLTHWGSTDARVCGWSPDPGEACQILAVSSHNQPFSYFSWAYSVPTD 133

Query: 248 RAP-KRIGNFRSMILAPRFSSNG--KRALISVQKDEAMDIYSVDLQSNATERLTNT---- 300
             P  R+       +A     +G  +  L++         +             +     
Sbjct: 134 GGPGGRLPWGPVSDIAVA-DIDGERRTLLLTGTPPHEPAAWKRYRGGATGRLWLHGERLL 192

Query: 301 LFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
             I+    +  +     +I F SD EG   LY    +G+D +R   D +A Y     S  
Sbjct: 193 PDIDGHLANPMFV--GRRIAFLSDHEGVGNLYSCLMDGTDLRR-HTDHDAFYARNAAS-D 248

Query: 358 GDLIAF 363
           G  + +
Sbjct: 249 GHRVVY 254


>gi|119961208|ref|YP_945991.1| prolyl oligopeptidase family protein [Arthrobacter aurescens TC1]
 gi|119948067|gb|ABM06978.1| putative prolyl oligopeptidase family protein [Arthrobacter
           aurescens TC1]
          Length = 705

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 69/190 (36%), Gaps = 17/190 (8%)

Query: 265 FSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVF 318
            S +G+    S+ K     D    + +VD+ +   + L +   ++      SPD+  +V 
Sbjct: 243 VSPDGRTIYTSMTKALAKADSREVLAAVDVATGTVKVLLDHQGMSYFPGPVSPDNRTLVV 302

Query: 319 ESDREGKE------QLYVMQSNGSDQ---KRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +S+ +         +L+++   G +    + ++   +       W P G  +  T     
Sbjct: 303 QSESDTTPTQAPHVKLHLLNVAGGETTDLEPLAHQWDRWATPLAWLPDGTAVLVTADDDG 362

Query: 370 KFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              +  +   DG+  R+  + +       SP G    ++ +   +  ++   I+L     
Sbjct: 363 ASPVFRIDVADGAVTRVTKDAAAYSDVVISPDGTE-AYALRSSYEFPAEAVRINLATGET 421

Query: 429 TLINTPAYAS 438
             +  PA   
Sbjct: 422 VRLQAPAEQP 431



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/247 (12%), Positives = 84/247 (34%), Gaps = 13/247 (5%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            ++P   R +   +   + ++ T    D  +    +++++     +  L  +D     ++
Sbjct: 219 SAAPLKLRNLTPGVGGSLREAKTVVSPDGRTIYTSMTKALAKADSREVLAAVDVATGTVK 278

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-----LRVYLMDTRIDRAP--KRIGNFR 257
            L   +    F    SP+ + +   +  D        ++++L++         + + +  
Sbjct: 279 VLLDHQGMSYFPGPVSPDNRTLVVQSESDTTPTQAPHVKLHLLNVAGGETTDLEPLAHQW 338

Query: 258 SMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                P  +  +G   L++   D A  ++ +D+   A  R+T           SPD ++ 
Sbjct: 339 DRWATPLAWLPDGTAVLVTADDDGASPVFRIDVADGAVTRVTKDAAAYSDVVISPDGTEA 398

Query: 317 -VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
               S  E   +   +     +  R+    E   +        + +  T   G +    +
Sbjct: 399 YALRSSYEFPAEAVRINLATGETVRLQAPAEQPVYKGRL----ERVDTTAEDGSRVPAYL 454

Query: 376 MKKDGSQ 382
              +G+ 
Sbjct: 455 ALPEGAS 461



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 36/99 (36%), Gaps = 16/99 (16%)

Query: 264 RFSSNGKRALISVQ------KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQI 316
             S +GKR + +V        + A  ++ +D        R+T +      A ++ +   +
Sbjct: 38  TLSPDGKRLVTTVTTLNGKGTEFATALWEIDPSGRNQARRITRSSKGEAGAVFAANGD-L 96

Query: 317 VFESDREGK--------EQLYVMQSNGSDQKRISQDKEA 347
            F S R             L+++ ++G + + +      
Sbjct: 97  YFTSARPDPDSPDADPVNALWLLPADGGEARVVHSRSGG 135


>gi|119776460|ref|YP_929200.1| peptidase S9, prolyl oligopeptidase active site region [Shewanella
           amazonensis SB2B]
 gi|119768960|gb|ABM01531.1| peptidase S9, prolyl oligopeptidase active site region [Shewanella
           amazonensis SB2B]
          Length = 680

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/282 (13%), Positives = 83/282 (29%), Gaps = 58/282 (20%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SPN     +        L     D        R P R+        +P +S +G+     
Sbjct: 44  SPNGNHALWLEGRWNKELDKSQNDLWQIDIKSRQPTRLTFTDESESSPVWSPDGQFIYFI 103

Query: 276 VQK---------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            ++         +    ++ + +       +T       +   +P+ + + F + ++ K+
Sbjct: 104 GKEKRNDAKAPFNGKAQVFRIPVTGGEAVPMTREAEGVSAFELAPNGASLYFLTHKDTKD 163

Query: 327 QLYVMQSNGSDQ-----------------------KRISQDKEASYFDPVWSPQGDLIAF 363
           +                                  + +  D +   +D   SP G+ IA 
Sbjct: 164 KDRWAGMRSGHSAPQYGHGKRDTNPLYKLDLVNFRQELVLDDDKVVWDFSVSPDGNHIAR 223

Query: 364 TKFSGEKF-------AIGVMKKDGSQERLLVED----------SNLQAPTWSPSGRSLIF 406
                 +         + V      Q R+L +             L+   W    + L F
Sbjct: 224 ITTEDNELVYLEGWSQVEVFDTANKQNRVLEDSAWRQQAASPYGWLEGLAWHGDSKRLAF 283

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPA----YASDPQWVG 444
               DG  G +L+ +D +G+ +  ++         +D QW  
Sbjct: 284 RIDFDGHPG-RLFVVDTDGKGQMELSRSGKVTLNGADIQWRP 324



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 35/105 (33%), Gaps = 14/105 (13%)

Query: 347 ASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
           A+      SP G+   + +          +  +  +     Q   L   D +  +P WSP
Sbjct: 36  ANMGTVKLSPNGNHALWLEGRWNKELDKSQNDLWQIDIKSRQPTRLTFTDESESSPVWSP 95

Query: 400 SGRSLIFS-------RKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            G+ + F         K   +  ++++ I + G     +   A  
Sbjct: 96  DGQFIYFIGKEKRNDAKAPFNGKAQVFRIPVTGGEAVPMTREAEG 140


>gi|322705978|gb|EFY97560.1| WD repeat-containing protein, putative [Metarhizium anisopliae
           ARSEF 23]
          Length = 951

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 80/227 (35%), Gaps = 17/227 (7%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           PN++ +A A+ D      V L D       + +   R  +L   FS +G     S   D 
Sbjct: 13  PNRKILASASSDR----TVRLWDDVTGAHKRTLQGHRGYVLDIAFSPDGNTLA-SASSDC 67

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + ++ V+ + N    L        S  +  +S+     SD      + +   N    K 
Sbjct: 68  QVWVWGVN-KGNHIRTLERHRDWVNSVVFLSNSTLASASSDWT----INLWDINHGICKT 122

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           + +    S      S  G ++A +  S     I    +    +  L  D ++ A +++P 
Sbjct: 123 VLKFHSGSVNALASSRNGKVLA-SGSSDRTVRIWNTAEGTPIKTSLDHDGSVTAVSFAPD 181

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           G  L  +     D   +L+  D   +   L     + +    V F++
Sbjct: 182 GHFLASASS---DKAVRLWDADTGSQIRMLEFHGGWVNS---VAFIN 222



 Score = 63.9 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 90/252 (35%), Gaps = 16/252 (6%)

Query: 172 DFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           D+ + ++F+S S   S     ++ + D +    + +       +     S N + +A  +
Sbjct: 88  DWVNSVVFLSNSTLASASSDWTINLWDINHGICKTVLKFHSGSVNALASSRNGKVLASGS 147

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D      V + +T      K   +    + A  F+ +G     S   D+A+ ++  D  
Sbjct: 148 SDR----TVRIWNTAEGTPIKTSLDHDGSVTAVSFAPDGHFLA-SASSDKAVRLWDAD-T 201

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            +    L        S ++  + +     SDR     L +      + ++          
Sbjct: 202 GSQIRMLEFHGGWVNSVAFINNITLATASSDRT----LRLWNITTDNMQKFEGLGGWFNS 257

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               + +  L+A +     +   G+M   GS++     D ++ A  +S  G  L  +   
Sbjct: 258 TAFLADRNVLVAASSDRTLRMWDGIM--GGSEQMREGHDGSVNAVAFSTDGTWLASASS- 314

Query: 411 DGDTGSKLYSID 422
             D   +++++D
Sbjct: 315 --DWTVRIWNVD 324



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 72/429 (16%), Positives = 125/429 (29%), Gaps = 81/429 (18%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDW---------NSLGAQVLVTGRVIKEGKDRLR 125
            S   N ++     + + +  S    + W          SL     VT  V         
Sbjct: 127 HSGSVNALASSRNGKVLASGSSDRTVRIWNTAEGTPIKTSLDHDGSVT-AVSFAPDGHFL 185

Query: 126 VE------FRLWDVKDRKQIIGKKFFS---------------SPASWRKIAH-TISDDIY 163
                    RLWD     QI   +F                 + +S R +    I+ D  
Sbjct: 186 ASASSDKAVRLWDADTGSQIRMLEFHGGWVNSVAFINNITLATASSDRTLRLWNITTDNM 245

Query: 164 QSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Q   G  G FNS       +V V+     +L + D        +    D  +    FS +
Sbjct: 246 QKFEGLGGWFNSTAFLADRNVLVAASSDRTLRMWDGIMGGSEQMREGHDGSVNAVAFSTD 305

Query: 223 QQKVAYAT---------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
              +A A+          D+   ++            + I +    IL+  FS +GK  L
Sbjct: 306 GTWLASASSDWTVRIWNVDEGTCVKTLEHQNHTTEDQQTIDDHSRYILSIAFSPDGK-IL 364

Query: 274 ISVQKDEAMDIYSVDLQS------------NATERLTNTLFINISASYSPDSSQIVFESD 321
            S   D  + ++ V+  +                   +     +S ++SP+   I   S 
Sbjct: 365 ASGSSDWRVRLWDVNEGTLIKTLAYRNHIIRDERTTEDHSRYVLSIAFSPNGKMIASGSS 424

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                ++     + S      +          +S  G L+A     G  +   V K++  
Sbjct: 425 ---DWRVRRWSIDRSVLLTTLEGHRNWVRAVAFSTDGKLLASASTDGTLYLWDVEKRNNK 481

Query: 382 QE------------------RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                               +       ++A  +SP G+ L  S   DG        +DL
Sbjct: 482 TSIYEDSASSILRERCCDADKRTHNQDWVRAIAFSPDGKVLA-STLTDGTVS----LLDL 536

Query: 424 NGRNETLIN 432
           N  N    +
Sbjct: 537 NKVNSIRTH 545



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 83/242 (34%), Gaps = 21/242 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D      +         + +  FSP+   +A A+ D     +V++    
Sbjct: 20  SASSDRTVRLWDDVTGAHKRTLQGHRGYVLDIAFSPDGNTLASASSD----CQVWVWGVN 75

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + +   R  + +  F SN    L S   D  ++++ ++        L        
Sbjct: 76  KGNHIRTLERHRDWVNSVVFLSNST--LASASSDWTINLWDINH-GICKTVLKFHSGSVN 132

Query: 306 SASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           + + S +   +    SDR     + +  +      + S D + S     ++P G  +A  
Sbjct: 133 ALASSRNGKVLASGSSDRT----VRIWNTAEGTPIKTSLDHDGSVTAVSFAPDGHFLASA 188

Query: 365 KFSGEKFAIGVMKKD-GSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  A+ +   D GSQ R+L      + +  +  +    I       D   +L++I 
Sbjct: 189 SSDK---AVRLWDADTGSQIRMLEFHGGWVNSVAFINN----ITLATASSDRTLRLWNIT 241

Query: 423 LN 424
            +
Sbjct: 242 TD 243


>gi|50251141|dbj|BAD27580.1| dipeptidyl aminopeptidase IV [Pseudomonas sp. WO24]
          Length = 745

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 65/202 (32%), Gaps = 51/202 (25%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP------ 263
               L +P+ +P+  +V +    D D  R+ L +  I     R+    S++L P      
Sbjct: 37  SGPTLTKPQIAPDGSRVTFLRGKDRDRNRLDLWEYDIASGQTRLLVDSSVVL-PGEEVLS 95

Query: 264 ---------------------RFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTL 301
                                ++S +GK  L  +     +  Y +      A  +LTN  
Sbjct: 96  DEEKARRERQRIAALSGIVDYQWSPDGKALLFPL--GGELYFYDLTKSGRDAVRKLTNGG 153

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-------- 353
                   SP    + F  DR     L+ +      + ++++D   +  + V        
Sbjct: 154 GFATDPKISPKGGFVSFIRDR----NLWAIDLASGKEVQLTRDGSDTIGNGVAEFVADEE 209

Query: 354 --------WSPQGDLIAFTKFS 367
                   W+P    IAF +  
Sbjct: 210 MDRHTGYWWAPDDAAIAFARID 231



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 108/349 (30%), Gaps = 82/349 (23%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQI------ 213
           D  + +T   G      +      VS I   +L  +D   G  ++      D I      
Sbjct: 144 DAVRKLTNGGGFATDPKISPKGGFVSFIRDRNLWAIDLASGKEVQLTRDGSDTIGNGVAE 203

Query: 214 ---------LFEPRFSPNQQKVAYATYDD-----EDILRVYLMDTRI----------DRA 249
                         ++P+   +A+A  D+     +    VY   T +             
Sbjct: 204 FVADEEMDRHTGYWWAPDDAAIAFARIDETPVPVQKRYEVYPDRTEVVEQRYPAAGDHNV 263

Query: 250 PKRIGNFRSMILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---------- 298
             ++G       A PR+          +   +  DIY   +     +RLT          
Sbjct: 264 RVQLGVIAPKTGARPRW----------IDLGKDPDIYLARVDWRDPQRLTFQRQSRDQKK 313

Query: 299 -------------NTLFINISASYSP---------DSSQIVFESDREGKEQLYVMQSNGS 336
                         TL    S ++ P         D  + ++ S+R G E LYV   +GS
Sbjct: 314 IELIETTLTNGTQRTLVTETSTTWVPLHNDLRFLKDG-RFLWSSERSGFEHLYVASEDGS 372

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVEDSNLQ 393
               ++Q +           +   +A+   + +      +  +   G + R L +   + 
Sbjct: 373 TLTALTQGEWVVDSLLAI-DEAAGLAYVSGTRDGATEAHVYAVPLSGGEPRRLTQAPGMH 431

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET--LINTPAYASDP 440
           A T++ +  S+         T  ++     +G      L+N  + A+ P
Sbjct: 432 AATFARN-ASVFVDSWSSDTTLPQIELFKADGTKLATLLVNDVSDATHP 479



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 44/127 (34%), Gaps = 39/127 (30%)

Query: 348 SYFDPVWSPQGDLIAFTK---FSGEKFAIGVMKKDGSQERLLVEDS-------------- 390
           +   P  +P G  + F +       +  +        Q RLLV+ S              
Sbjct: 40  TLTKPQIAPDGSRVTFLRGKDRDRNRLDLWEYDIASGQTRLLVDSSVVLPGEEVLSDEEK 99

Query: 391 ------------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN--GRN--ETLINTP 434
                        +    WSP G++L+F        G +LY  DL   GR+    L N  
Sbjct: 100 ARRERQRIAALSGIVDYQWSPDGKALLF------PLGGELYFYDLTKSGRDAVRKLTNGG 153

Query: 435 AYASDPQ 441
            +A+DP+
Sbjct: 154 GFATDPK 160


>gi|298246706|ref|ZP_06970511.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297549365|gb|EFH83231.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 377

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 91/233 (39%), Gaps = 29/233 (12%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKV-------AYATYDDEDILRVYLMDTRIDRAPKRIG 254
           N +  +      L    +SP  +++       A   +D  +   + L +   ++     G
Sbjct: 159 NWQTTSTHPRPELLSVAWSPTSKQLVAGNADGALLLWDTTNGRNLGLWE-GPNQYVSSGG 217

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSP 311
            +   +    +S +G+  + S + D+   ++        + ++T+ L      +   YSP
Sbjct: 218 RYPYAVWGVAWSPDGQHIV-SNRYDKYTFMW-----DTQSSKITHQLPPQDQPNGVAYSP 271

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEK 370
           D  Q V  S+  G  Q++   + G   + ++   +  +  PV WSP   L+A  +  G  
Sbjct: 272 DG-QFVATSNDAGTVQIW--DAQGKLVRVLTGHTDTGWAYPVMWSPDTSLLATARAYG-- 326

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSI 421
             + + +    QE + ++  N      +WSPSG  +        D   +L+ +
Sbjct: 327 -LVQLWEVQNGQELVAIQGHNAGVFTGSWSPSGTIIATGSD---DATVRLWGV 375



 Score = 43.1 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 77/284 (27%), Gaps = 70/284 (24%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP   ++         +  +   +         + N +  +    +S +G    ++    
Sbjct: 42  SPAPVQIPATPTPRPTLKPISASNAHNLAQIGVLENMQDKVRGLCWSPDGSFLAVA--PG 99

Query: 280 EAMDIY-------SVDLQSN---------------------------------ATERLTN 299
           E + I+          LQ                                    T+RL N
Sbjct: 100 EHIQIWQSASLKQVATLQGKTGSINGMAWSSDGISLAAAGDKGIVQIWQTTNWQTQRLLN 159

Query: 300 TLFINISAS-------YSPDSSQIVFESDREGKEQLYVMQSN------GSDQKRISQDKE 346
               +           +SP S Q+V   + +G   L+   +           + +S    
Sbjct: 160 WQTTSTHPRPELLSVAWSPTSKQLV-AGNADGALLLWDTTNGRNLGLWEGPNQYVSSGGR 218

Query: 347 ASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRS 403
             Y  +   WSP G  I   ++    F   +     S+    L          +SP G+ 
Sbjct: 219 YPYAVWGVAWSPDGQHIVSNRYDKYTF---MWDTQSSKITHQLPPQDQPNGVAYSPDGQF 275

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTP---AYASDPQWVG 444
           +  S         +++  D  G+   ++       +A    W  
Sbjct: 276 VATSNDAG---TVQIW--DAQGKLVRVLTGHTDTGWAYPVMWSP 314


>gi|262194707|ref|YP_003265916.1| WD40 repeat, subgroup [Haliangium ochraceum DSM 14365]
 gi|262078054|gb|ACY14023.1| WD40 repeat, subgroup [Haliangium ochraceum DSM 14365]
          Length = 181

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 73/194 (37%), Gaps = 16/194 (8%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++  RFSP+ + V    +      R+ +     + A   +    +   A  F   G R  
Sbjct: 1   MYAARFSPDGEYVLATGF----APRLRVRRADEEGATVAVCELGAGSYAVAFDPAGTRLA 56

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                +  ++++  D + +      +T  I  S  +SPD +++V  SD    + + V Q 
Sbjct: 57  ---AGNTNIEVWPADCRGSPVVLRGHTDAI-RSLEFSPDGARLVSASD---DKTVRVWQL 109

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            GS    + +   A  +   + P G  +           I V   DGS   L++      
Sbjct: 110 GGSAAPVVLRGHSALVWAANFRPDGTRVVSASEDKT---IRVWNADGSGVPLVLRGHEDG 166

Query: 394 APT--WSPSGRSLI 405
             +  +SP G+ ++
Sbjct: 167 VRSVEFSPDGQRIV 180



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 52/171 (30%), Gaps = 29/171 (16%)

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF--------FSSPASWRKIAHTISDDIY 163
            T  V + G     V F   D    +   G             SP   R   HT  D I 
Sbjct: 32  ATVAVCELGAGSYAVAF---DPAGTRLAAGNTNIEVWPADCRGSPVVLR--GHT--DAIR 84

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                  G            +VS     ++ V    G+    +      +++   F P+ 
Sbjct: 85  SLEFSPDGA----------RLVSASDDKTVRVWQLGGSAAPVVLRGHSALVWAANFRPDG 134

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            +V  A+ D      + + +      P  +      + +  FS +G+R ++
Sbjct: 135 TRVVSASEDK----TIRVWNADGSGVPLVLRGHEDGVRSVEFSPDGQRIVL 181


>gi|160887954|ref|ZP_02068957.1| hypothetical protein BACUNI_00358 [Bacteroides uniformis ATCC 8492]
 gi|156862453|gb|EDO55884.1| hypothetical protein BACUNI_00358 [Bacteroides uniformis ATCC 8492]
          Length = 489

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/269 (17%), Positives = 86/269 (31%), Gaps = 58/269 (21%)

Query: 188 IIKNSLCVMDRDGANIR--YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             KN   +M  DG        T S       P + PN + +AY+  +             
Sbjct: 192 RGKNGGTLMQIDGKREMLDTKTDSTLSAGVYPYWHPNGKYIAYSVNNTRQSFHA------ 245

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           +      + +  S +L   +       L+S             L                
Sbjct: 246 VKDERVEVLDLESDVL--VYHPETHELLLS------------PLLQKKEV-------FET 284

Query: 306 SASYSPDSSQIVFES---------DREGKEQLYVMQS---NGSDQKRISQDKEA-----S 348
              +SPD  ++ F +          +E +  L  +     +G+  ++I     A     S
Sbjct: 285 FPVFSPDGRKLYFCTAEAKPIPAEYKEIRYSLCSIDFNPEDGTFGEKIDTLVNAAAMKKS 344

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAPT---WS 398
              P  S  G+ I FT      F+I        ++       R + E ++    +   WS
Sbjct: 345 ISFPRPSYDGEYIMFTLSDYGNFSIWHKEADLWLLDLKDGGMRPIKEVNSDDTESFHNWS 404

Query: 399 PSGRSLIFSRKKDGDTGSKLY--SIDLNG 425
            + R  +FS ++     ++LY  S+D NG
Sbjct: 405 SNSRWFVFSSRRGDGLYTRLYLASMDENG 433



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 31/177 (17%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGN 255
           L   ++     P FSP+ +K+ + T + + I   Y            +       ++I  
Sbjct: 275 LLQKKEVFETFPVFSPDGRKLYFCTAEAKPIPAEYKEIRYSLCSIDFNPEDGTFGEKIDT 334

Query: 256 F------RSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLF 302
                  +  I  PR S +G+  + ++             D++ +DL+      +     
Sbjct: 335 LVNAAAMKKSISFPRPSYDGEYIMFTLSDYGNFSIWHKEADLWLLDLKDGGMRPIKEVNS 394

Query: 303 INIS--ASYSPDSSQIVFESDREGK--EQLYV--MQSNG--SDQKRISQDKEASYFD 351
            +     ++S +S   VF S R      +LY+  M  NG       + Q+    Y+D
Sbjct: 395 DDTESFHNWSSNSRWFVFSSRRGDGLYTRLYLASMDENGVVGKPFLLPQENPWEYYD 451


>gi|326772405|ref|ZP_08231689.1| vegetative incompatibility protein HET-E-1 [Actinomyces viscosus
           C505]
 gi|326637037|gb|EGE37939.1| vegetative incompatibility protein HET-E-1 [Actinomyces viscosus
           C505]
          Length = 277

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 85/261 (32%), Gaps = 33/261 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L       L+   +SP+  ++   ++D        + D         +      I A  
Sbjct: 17  SLYAGHFDALWGVAWSPDGTRLLSGSHDG----TARVWDANRGTELFALAGPSLSISAVA 72

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G R L +  +D ++ ++     ++          +  + ++SPDS++I+  S  + 
Sbjct: 73  WSPDGTRLL-TAAEDHSVRVWDATTGADLLTLGVGGSGVGGAVAWSPDSTRIL-TSFDDA 130

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             +++   ++     R             WSP G  +A     G    +  +       R
Sbjct: 131 SARIW--DASSGQVVRTLSGHTEHLTAVSWSPDGTRVATASDDGTA-RVWDVTTGTELLR 187

Query: 385 L----LVEDSNLQAP----------------TWSPSGRSLIFSRKKDGDTGSKLYS---- 420
           +     V       P                +WSP  R +I +            +    
Sbjct: 188 VGPMAFVGRGATMGPDGRPTHVGPIEPMTGLSWSPDSRRIITAFDSAEPRVWDAATGEEV 247

Query: 421 IDLNGRNETLINTPAYASDPQ 441
           + L+GR    ++  +++ D  
Sbjct: 248 LSLHGRERRWVSVVSWSPDGS 268



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 85/246 (34%), Gaps = 40/246 (16%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    +  V D +     +        +    +SP+  ++  A  D    +RV+   T 
Sbjct: 40  SGSHDGTARVWDANRGTELFALAGPSLSISAVAWSPDGTRLLTAAEDHS--VRVWDATTG 97

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
            D           +  A  +S +  R L +   D +  I+  D  S    R L+      
Sbjct: 98  ADLLT-LGVGGSGVGGAVAWSPDSTRIL-TSFDDASARIW--DASSGQVVRTLSGHTEHL 153

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDP--------- 352
            + S+SPD +++   SD +G  +++ + + G++  R+   +     +   P         
Sbjct: 154 TAVSWSPDGTRVATASD-DGTARVWDV-TTGTELLRVGPMAFVGRGATMGPDGRPTHVGP 211

Query: 353 -------VWSPQGDLI--AFTKFSGEKFAIG----VMKKDGSQERLLVEDSNLQAPTWSP 399
                   WSP    I  AF       +       V+   G + R       +   +WSP
Sbjct: 212 IEPMTGLSWSPDSRRIITAFDSAEPRVWDAATGEEVLSLHGRERR------WVSVVSWSP 265

Query: 400 SGRSLI 405
            G  +I
Sbjct: 266 DGSRII 271



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 69/206 (33%), Gaps = 33/206 (16%)

Query: 186 SGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           +    +S+ V D   GA++  L      +     +SP+  ++  +  D        + D 
Sbjct: 82  TAAEDHSVRVWDATTGADLLTLGVGGSGVGGAVAWSPDSTRILTSFDDA----SARIWDA 137

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--------- 295
              +  + +      + A  +S +G R   +   D    ++ V   +             
Sbjct: 138 SSGQVVRTLSGHTEHLTAVSWSPDGTRVA-TASDDGTARVWDVTTGTELLRVGPMAFVGR 196

Query: 296 --------RLTNTLFIN--ISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQ 343
                   R T+   I      S+SPDS +I   F+S      +  V  +   ++     
Sbjct: 197 GATMGPDGRPTHVGPIEPMTGLSWSPDSRRIITAFDS-----AEPRVWDAATGEEVLSLH 251

Query: 344 DKEASYFDPV-WSPQGDLIAFTKFSG 368
            +E  +   V WSP G  I     SG
Sbjct: 252 GRERRWVSVVSWSPDGSRIITDDISG 277


>gi|255595162|ref|XP_002536239.1| dipeptidyl peptidase IV, putative [Ricinus communis]
 gi|223520332|gb|EEF26144.1| dipeptidyl peptidase IV, putative [Ricinus communis]
          Length = 449

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 52/297 (17%), Positives = 102/297 (34%), Gaps = 75/297 (25%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             R  T S   IL    +SP+ +++      D     +YL+D     A +++ +    + 
Sbjct: 97  RERARTASLSGILSY-SWSPDGKQLLVPIAGD-----LYLVDVNKPEAARKVAS--GNVG 148

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------------- 308
            P+ S  G+       ++    ++ +DL +    +LT     +   +             
Sbjct: 149 DPKISPKGRYVSYVRDQN----LFVIDLTTGQERQLTTD-GKDTVHNGEAEFVAQEEMDQ 203

Query: 309 -----YSPDSSQIVFE----------------SDRE----------GKEQ----LYVMQS 333
                ++PD S I +                 +DR           G +     L ++  
Sbjct: 204 HTGYYWAPDDSAIAYRRYDEAQVPVARRFEIFADRTEVIDQRYPAAGAKNVEIDLMIVNP 263

Query: 334 NGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVE 388
               QK++    DK+       WS  G  + + + S ++  + ++  D    +Q  LL E
Sbjct: 264 ATGAQKKVDLGPDKDIYLVRADWSADGKTLVYQRQSRDQKRLDLVAVDAATLAQRPLLTE 323

Query: 389 DSNLQAPTWSPSGRSL------IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            S     +     R L      I++ ++ G     LY  DL G     I++  +  D
Sbjct: 324 TSKTWV-SIHDDLRFLARQKAFIWASERSGRK--HLYLYDLAGHLLHPISSGEWGVD 377



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/291 (13%), Positives = 94/291 (32%), Gaps = 84/291 (28%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFR------------------- 257
           R SP+ ++V +     ++  ++ L +    D+   R+ + +                   
Sbjct: 41  RVSPDGERVTFLRGRADNQFQLDLWEFNMKDKTTHRLVDSKQLVPNENLSLEEKARRERA 100

Query: 258 -----SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                S IL+  +S +GK+ L+ +  D    +Y VD+      R   +         SP 
Sbjct: 101 RTASLSGILSYSWSPDGKQLLVPIAGD----LYLVDVNKPEAARKVAS-GNVGDPKISPK 155

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----------------VWSP 356
              + +  D    + L+V+      +++++ D + +  +                  W+P
Sbjct: 156 GRYVSYVRD----QNLFVIDLTTGQERQLTTDGKDTVHNGEAEFVAQEEMDQHTGYYWAP 211

Query: 357 QGDLIAFTKFS------GEKFAIG------------------------VMKKDGSQERLL 386
               IA+ ++         +F I                         ++      ++ +
Sbjct: 212 DDSAIAYRRYDEAQVPVARRFEIFADRTEVIDQRYPAAGAKNVEIDLMIVNPATGAQKKV 271

Query: 387 VEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
               +         WS  G++L++ R+        L ++D     +  + T
Sbjct: 272 DLGPDKDIYLVRADWSADGKTLVYQRQSRDQKRLDLVAVDAATLAQRPLLT 322



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 34/175 (19%)

Query: 264 RFSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           R S +G+R      + +    +D++  +++   T RL              DS Q+V   
Sbjct: 41  RVSPDGERVTFLRGRADNQFQLDLWEFNMKDKTTHRLV-------------DSKQLV--- 84

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                    +     + ++R      +      WSP G  +     +G+   + ++  + 
Sbjct: 85  -----PNENLSLEEKARRERARTASLSGILSYSWSPDGKQLL-VPIAGD---LYLVDVNK 135

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +    V   N+  P  SP GR + + R ++      L+ IDL    E  + T  
Sbjct: 136 PEAARKVASGNVGDPKISPKGRYVSYVRDQN------LFVIDLTTGQERQLTTDG 184



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 61/363 (16%), Positives = 109/363 (30%), Gaps = 95/363 (26%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
            W+  G Q+LV         D       L DV              P + RK+A      
Sbjct: 112 SWSPDGKQLLV-----PIAGDLY-----LVDVNK------------PEAARKVA------ 143

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPR-- 218
                    G+     +      VS +   +L V+D   G   +  T  +D +       
Sbjct: 144 --------SGNVGDPKISPKGRYVSYVRDQNLFVIDLTTGQERQLTTDGKDTVHNGEAEF 195

Query: 219 -------------FSPNQQKVAYATYDDEDIL----------RVYLMDTRIDRAPKRIGN 255
                        ++P+   +AY  YD+  +           R  ++D R   A  +   
Sbjct: 196 VAQEEMDQHTGYYWAPDDSAIAYRRYDEAQVPVARRFEIFADRTEVIDQRYPAAGAKNVE 255

Query: 256 FRSMILAPR---------------------FSSNGKRALISVQKDE--AMDIYSVDLQSN 292
              MI+ P                      +S++GK  +   Q  +   +D+ +VD  + 
Sbjct: 256 IDLMIVNPATGAQKKVDLGPDKDIYLVRADWSADGKTLVYQRQSRDQKRLDLVAVDAATL 315

Query: 293 ATERL-TNTL----FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           A   L T T      I+    +       ++ S+R G++ LY+    G     IS  +  
Sbjct: 316 AQRPLLTETSKTWVSIHDDLRFLARQKAFIWASERSGRKHLYLYDLAGHLLHPISSGEWG 375

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQ---ERLLVEDSNLQAPTWSPSGR 402
                    Q   +               V+  DGS       L +        ++ +G+
Sbjct: 376 VDNILAVDEQAGKVYIASNKDAVIDKQTYVLNLDGSNASKPVRLTKQDGWHEDVFARNGK 435

Query: 403 SLI 405
             +
Sbjct: 436 VFV 438


>gi|307326376|ref|ZP_07605572.1| WD40 repeat, subgroup [Streptomyces violaceusniger Tu 4113]
 gi|306888039|gb|EFN19029.1| WD40 repeat, subgroup [Streptomyces violaceusniger Tu 4113]
          Length = 485

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 75/221 (33%), Gaps = 8/221 (3%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYS 286
           +          +         +RI   R          FS +G+    S      + ++ 
Sbjct: 156 SSSSPRARPRPVTSIPAHPTIRRIATLRGHTGTVGGLWFSPDGQTLASSEADVGNLQLWD 215

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           V         LT+ L    SA+ SPD   +V   +DR    QL  ++ +G   + +S   
Sbjct: 216 VRTHRRIHAPLTSALAAFQSAAISPDGGTLVTGGADRAQFWQLPSLRQSGRSLE-LSDHT 274

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSL 404
              +     SP G  +A     GE   +  +     + ++L   +  +    +SP G +L
Sbjct: 275 LRPFEVVALSPDGRTLATGGTDGEDLWLWDVASRRQRGKVLTGHEGGVDGLLFSPDGATL 334

Query: 405 IFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
             S    GD   +L+ +  + R  ETL           +  
Sbjct: 335 AVSSHV-GDGVVRLWDVASHRRRGETLTGHQGGVGAMVFSP 374



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 80/224 (35%), Gaps = 16/224 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPR 264
                   +    FSP+ Q +A +  D  +   + L D R  R     + +  +   +  
Sbjct: 181 TLRGHTGTVGGLWFSPDGQTLASSEADVGN---LQLWDVRTHRRIHAPLTSALAAFQSAA 237

Query: 265 FSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDR 322
            S +G   +     + +   + S+     + E L++         + SPD   +      
Sbjct: 238 ISPDGGTLVTGGADRAQFWQLPSLRQSGRSLE-LSDHTLRPFEVVALSPDGRTLA-TGGT 295

Query: 323 EGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMK 377
           +G++ L++       Q+  +    E      ++SP G  +A +   G+     + +   +
Sbjct: 296 DGED-LWLWDVASRRQRGKVLTGHEGGVDGLLFSPDGATLAVSSHVGDGVVRLWDVASHR 354

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + G  E L      + A  +SP   +L+ S     D   +L+  
Sbjct: 355 RRG--ETLTGHQGGVGAMVFSPDSTTLVVSASVGADGLVRLWDT 396



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 62/194 (31%), Gaps = 5/194 (2%)

Query: 186 SGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            G     L + D      R  +    +  +    FSP+   +A +++  + ++R++ + +
Sbjct: 293 GGTDGEDLWLWDVASRRQRGKVLTGHEGGVDGLLFSPDGATLAVSSHVGDGVVRLWDVAS 352

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLF 302
              R  + +   +  + A  FS +    ++S        +   D  +       L     
Sbjct: 353 H-RRRGETLTGHQGGVGAMVFSPDSTTLVVSASVGADGLVRLWDTATGTPRGEPLRARTV 411

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              + +YS D   IV      G   L    +    ++    +         ++  G  +A
Sbjct: 412 GVSALAYSGDGKTIVTLGFYSGLT-LRFWDAATHKERAKPLELARLSQPTAFTADGLTLA 470

Query: 363 FTKFSGEKFAIGVM 376
              +      +  +
Sbjct: 471 TGSYEDHGIRLWRI 484


>gi|160901736|ref|YP_001567317.1| hypothetical protein Pmob_0250 [Petrotoga mobilis SJ95]
 gi|160359380|gb|ABX30994.1| hypothetical protein Pmob_0250 [Petrotoga mobilis SJ95]
          Length = 399

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 101/264 (38%), Gaps = 26/264 (9%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E   F +  L++      G  +  +        +   L  S +   + P  SPN + + 
Sbjct: 144 DEYPVFQNNKLYLVSDRYIGNREIYIFDFKEGTQDKIPLEYSAE---YFPDISPNDEYLT 200

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD--IY 285
           + T        + L +    +  ++I        +P F  +    L ++ +D      ++
Sbjct: 201 FQTTLFGK-WDIVLYNLET-KEIQKISPPDKNAYSPYF-YDNTLILFTMDEDSGQWTEVW 257

Query: 286 SVDLQSNATERLTNTLFINISASYSP---DSSQIVF--ESDREGKEQLYVMQSNGSDQKR 340
             DL  +  E+LT +  +     + P   D ++I F     +     +Y +    S    
Sbjct: 258 IYDLYYDKLEKLTESKDL---LKFRPTKWDGNKISFYGVDHQTANMNVYFVDEENSISPL 314

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWS 398
           I+Q    +     WS   +L+ F++F+G  F+I     D  ++R L     ++   PT++
Sbjct: 315 IAQQNNQTDN---WSNGSELLVFSEFNGTYFSIYEY--DDGEKRNLSGMLTNDCFYPTYT 369

Query: 399 PSGRSLIFSRKKDGDTGSKLYSID 422
           P  + + F+      + S ++ I+
Sbjct: 370 PDKKYVFFTNYY---SESDIFVIN 390


>gi|256396191|ref|YP_003117755.1| peptidase S41 [Catenulispora acidiphila DSM 44928]
 gi|256362417|gb|ACU75914.1| peptidase S41 [Catenulispora acidiphila DSM 44928]
          Length = 1107

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 91/299 (30%), Gaps = 44/299 (14%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---- 228
           F+ R++F S+          L     DG ++R  T              +  ++ +    
Sbjct: 206 FDGRVVFHSDHEDGVA---ELYSALPDGTDLRRHTTGEGGYYLRNA-MTDGVRIVFQRAG 261

Query: 229 ---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                 D ED  R   +     R         +      FS +      +V+      ++
Sbjct: 262 RLWVMEDLEDDPRALDIRLPGARTATTSRPIDAAQHLGAFSPDHTGRASAVEVRGT--VH 319

Query: 286 SVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSD------- 337
            +  +      L     +          + Q  + +D  G+  + +   NG+D       
Sbjct: 320 WLTHKDGPARALGVEAGVRGWLPVVLGQTGQTAWVTDAGGQYSIEIAGVNGADGVGSADA 379

Query: 338 --------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                   ++RI   +     + V SP G  +A          + ++  +G   R++ + 
Sbjct: 380 ADSADGATRRRILTGEFGYVNELVASPDGKHLAAATRDN---KLLLIDVEGGTLRVVTDG 436

Query: 390 ------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                         +  P +SP  R L +S++ D     ++   D+       I  P +
Sbjct: 437 EGKFRAMPRWGVGFVSDPAFSPDSRWLAWSQRSDVPDAWQIRVADVASLETLDITEPRF 495



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 78/234 (33%), Gaps = 29/234 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   + +   D  D+    L          R+ + R  +  P  S +G R   +  ++  
Sbjct: 14  SGSTLTFIADD--DVWLTDLPGFAASARAWRVTSDRVPVKRPLLSPDGSRVAWTSAREGV 71

Query: 282 MDIYSVDLQSNATERLTNTLFINISAS-Y-SPDSSQIVFESDREGKEQ-----LYVMQSN 334
           ++ +++ +    T RLT        A  + SPD    V      G         + +   
Sbjct: 72  VEAFALPVDGGETHRLTYWGHPRTEAIGWASPDE---VIVRGWGGHGHRFYSFAHTVPFE 128

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE------ 388
           G    R+      S        +G  +  ++F      +    + G+  +L ++      
Sbjct: 129 GGQPTRLPYGNLKSLAVAEPGVEGSPVVLSRFYAGNSWLWKGYRGGATGQLWIDRAGTGE 188

Query: 389 --------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                   D NL  P W   GR ++F    + D  ++LYS   +G +     T 
Sbjct: 189 FERFLADLDGNLGDPMWF-DGR-VVFHSDHE-DGVAELYSALPDGTDLRRHTTG 239



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 8/128 (6%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDE------DILRVYLMDTRIDRAPKRIGNFR 257
           R +       + E   SP+ + +A AT D++      +   + ++     +         
Sbjct: 389 RRILTGEFGYVNELVASPDGKHLAAATRDNKLLLIDVEGGTLRVVTDGEGKFRAMPRWGV 448

Query: 258 SMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             +  P FS + +    S + D  +A  I   D+ S  T  +T   F + +  ++ D   
Sbjct: 449 GFVSDPAFSPDSRWLAWSQRSDVPDAWQIRVADVASLETLDITEPRFRDWNPVFTADGKH 508

Query: 316 IVFESDRE 323
           + F S R 
Sbjct: 509 LAFLSART 516



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 43/127 (33%), Gaps = 16/127 (12%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD----------KE 346
           LT           SPD   +   + R+   +L ++   G   + ++              
Sbjct: 392 LTGEFGYVNELVASPDGKHLA-AATRD--NKLLLIDVEGGTLRVVTDGEGKFRAMPRWGV 448

Query: 347 ASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRS 403
               DP +SP    +A+++ S   + + I V      +   + E       P ++  G+ 
Sbjct: 449 GFVSDPAFSPDSRWLAWSQRSDVPDAWQIRVADVASLETLDITEPRFRDWNPVFTADGKH 508

Query: 404 LIFSRKK 410
           L F   +
Sbjct: 509 LAFLSAR 515



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 73/236 (30%), Gaps = 29/236 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +   S    +  P  SP+  +VA+ +   E ++  + +        +          A  
Sbjct: 41  WRVTSDRVPVKRPLLSPDGSRVAWTSAR-EGVVEAFALPVDGGETHRLTYWGHPRTEAIG 99

Query: 265 F-SSNGKRALISVQKDEAMDIY----SVDLQSNATERLTNT---------LFINISASY- 309
           + S +    ++          Y    +V  +     RL              +  S    
Sbjct: 100 WASPD--EVIVRGWGGHGHRFYSFAHTVPFEGGQPTRLPYGNLKSLAVAEPGVEGSPVVL 157

Query: 310 --SPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
                 +  +++  R G   QL++ ++   + +R   D + +  DP+W   G ++  +  
Sbjct: 158 SRFYAGNSWLWKGYRGGATGQLWIDRAGTGEFERFLADLDGNLGDPMW-FDGRVVFHSDH 216

Query: 367 SGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 +     DG+  R     +           G  ++F R        +L+ +
Sbjct: 217 EDGVAELYSALPDGTDLRRHTTGEGGYYLRNAMTDGVRIVFQR------AGRLWVM 266



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 70/199 (35%), Gaps = 36/199 (18%)

Query: 104 NSLGAQV-------LVTGR-----VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
            +LG +        +V G+      + +   +  +E    +  D          +  A+ 
Sbjct: 329 RALGVEAGVRGWLPVVLGQTGQTAWVTDAGGQYSIEIAGVNGADGVGSADAADSADGATR 388

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLCVMDRDGANIRYLTPSR 210
           R+I           +TGE G  N  +       ++   + N L ++D +G  +R +T   
Sbjct: 389 RRI-----------LTGEFGYVNELVASPDGKHLAAATRDNKLLLIDVEGGTLRVVTDGE 437

Query: 211 DQILFEPRF----------SPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            +    PR+          SP+ + +A++   D  D  ++ + D         I   R  
Sbjct: 438 GKFRAMPRWGVGFVSDPAFSPDSRWLAWSQRSDVPDAWQIRVADV-ASLETLDITEPRFR 496

Query: 260 ILAPRFSSNGKRALISVQK 278
              P F+++GK       +
Sbjct: 497 DWNPVFTADGKHLAFLSAR 515


>gi|254410201|ref|ZP_05023981.1| protein kinase domain [Microcoleus chthonoplastes PCC 7420]
 gi|196183237|gb|EDX78221.1| protein kinase domain [Microcoleus chthonoplastes PCC 7420]
          Length = 608

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 86/242 (35%), Gaps = 23/242 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    +L +        R    S +  +    F+P ++ +     D++    + +  +
Sbjct: 384 VSGSRDETLRLWQVKTGKQRVSVKSHNGGVDSVAFNPKKRLLVSCGRDNK----IRICQS 439

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFI 303
           +  +  + + +  S      FS +G + L S      + ++ V       +RL T    I
Sbjct: 440 QTLKTIQVLSSRSSGFNCVAFSPDG-QILASGSGYRTIKLWYVP----HWQRLGTLAGHI 494

Query: 304 N--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           N   + ++SPDS  +   S       + +       Q  + Q          +SP G L+
Sbjct: 495 NSVDAIAFSPDSMILASGSS---DATIRLWDIRTLTQTALIQGNFPQVRSLAFSPDGRLL 551

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           A     G    I +      QE   +E      Q   +SP G++L        D   K++
Sbjct: 552 ASC---GGDNRIKIWDVATGQECCTLEGHTDIVQVVAFSPDGQTLA---SGSCDKTIKIW 605

Query: 420 SI 421
            +
Sbjct: 606 RV 607



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 80/226 (35%), Gaps = 18/226 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A++          +    FSP+++ +A  + D      + L    +    +  G + S  
Sbjct: 311 ASLINTIRGHSDRISTITFSPDKKSLASGSVDK----TIKLWQVSMAWEIRTFGGWFSGN 366

Query: 261 LAP-----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +       FS +GK  + S  +DE + ++ V         + +      S +++P    
Sbjct: 367 HSKEITCLAFSPDGKYLV-SGSRDETLRLWQV-KTGKQRVSVKSHNGGVDSVAFNPKKRL 424

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +V         ++ + QS      ++   + + +    +SP G ++A +        +  
Sbjct: 425 LVSC---GRDNKIRICQSQTLKTIQVLSSRSSGFNCVAFSPDGQILA-SGSGYRTIKLWY 480

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +        L    +++ A  +SP    ++       D   +L+ I
Sbjct: 481 VPHWQRLGTLAGHINSVDAIAFSPDS-MIL--ASGSSDATIRLWDI 523


>gi|86142430|ref|ZP_01060940.1| Acylaminoacyl-peptidase [Leeuwenhoekiella blandensis MED217]
 gi|85831182|gb|EAQ49639.1| Acylaminoacyl-peptidase [Leeuwenhoekiella blandensis MED217]
          Length = 899

 Score = 67.7 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 77/244 (31%), Gaps = 65/244 (26%)

Query: 262 APRFSSNGKRALISVQKD-EAMDIYSVDL---------QSNATE-RLTNTLFINISASYS 310
           AP FS +G   + S  K  +  D +  +L                +LT     + S  +S
Sbjct: 44  APVFSPDGNMVVWSKSKAVKKKDRFVANLYLTRLGIQEDGKFLTTQLTQGDENDYSPIFS 103

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            DS  + F S R+  ++L+ +   G + + I +         +     + + FT  +G+ 
Sbjct: 104 KDSKALYFLSSRDKGKKLWKLSLYGGEAEEIHEFDNGISSIQL--KDRNTLFFTSKNGKT 161

Query: 371 F------------------------AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
                                     I        +   + +++  ++    S  G  L 
Sbjct: 162 LYDVEAEEKEDNVQVIEDSLHWQPSHIYAFDLKDKKITRITDNTKPIRGYQLSHDGNWLY 221

Query: 406 FSRKKDGDTGSKL------YSIDL-NGRNETLIN--------------------TPAYAS 438
           +S  +    G+        Y +DL  G  + ++                        ++S
Sbjct: 222 YSITRSLSYGADAQKDPFSYLVDLKTGDKKQILKDFEFPIYSVQFSADDSGFYFGTGFSS 281

Query: 439 DPQW 442
           DP+W
Sbjct: 282 DPEW 285



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 14/90 (15%)

Query: 348 SYFDPVWSPQGDLIAFTKF----SGEKF--AIGVMKK----DGS--QERLLVEDSNLQAP 395
           S   PV+SP G+++ ++K       ++F   + + +     DG     +L   D N  +P
Sbjct: 41  SMRAPVFSPDGNMVVWSKSKAVKKKDRFVANLYLTRLGIQEDGKFLTTQLTQGDENDYSP 100

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +S   ++L F   +  D G KL+ + L G
Sbjct: 101 IFSKDSKALYFLSSR--DKGKKLWKLSLYG 128


>gi|256787205|ref|ZP_05525636.1| protease [Streptomyces lividans TK24]
 gi|289771103|ref|ZP_06530481.1| protease [Streptomyces lividans TK24]
 gi|289701302|gb|EFD68731.1| protease [Streptomyces lividans TK24]
          Length = 1169

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 76/210 (36%), Gaps = 36/210 (17%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++L          R+   R+    PRFS +G+    +  +    +++ V +      +LT
Sbjct: 25  LWLASLDGPGRAWRLTVDRTKAGPPRFSPDGRHIAYTSWRTLVPEVHLVPVDGGPGRQLT 84

Query: 299 NTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +   ++     +SP         D +G   +  + S+G     ++            +P 
Sbjct: 85  HWGGLDTRVCGWSPP--------DPDGTTAVLAVASHGEPFSHLTW-------AYKVTPD 129

Query: 358 GD---LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           GD    + +    G    I     DG +  LL+  +    P          + R + G T
Sbjct: 130 GDPGRKLPW----GPVTDIQAADLDGERRTLLLTGTPPHEPA--------AWKRYRGGAT 177

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           G +L+   L+G    L +   + S P +VG
Sbjct: 178 G-RLW---LHGERL-LPDLGGHLSAPMFVG 202



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 82/253 (32%), Gaps = 38/253 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +   DG    +           PRFSP+ + +AY ++    +  V+L+        +
Sbjct: 24  DLWLASLDGPGRAWRLTVDRTKAGPPRFSPDGRHIAYTSWRT-LVPEVHLVPVD-GGPGR 81

Query: 252 RIGNFRSMILAPR-FS---SNGKRALISVQKDEAM-----DIYSVDLQSNATERLTNTLF 302
           ++ ++  +      +S    +G  A+++V             Y V    +   +L     
Sbjct: 82  QLTHWGGLDTRVCGWSPPDPDGTTAVLAVASHGEPFSHLTWAYKVTPDGDPGRKLPWGPV 141

Query: 303 INISASYSPDSSQI-------------VFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +I A+   D  +               ++  R G      +  +G   +R+  D     
Sbjct: 142 TDIQAA-DLDGERRTLLLTGTPPHEPAAWKRYRGGATG--RLWLHG---ERLLPDLGGHL 195

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             P++   G  IAF         +     DG+  R   +     A   +  G  +++   
Sbjct: 196 SAPMFV--GGRIAFLSDHEGVGNLYSCAYDGTGLRRHTDHDAFYARNAASDGTRVVY--- 250

Query: 410 KDGDTGSKLYSID 422
                   L+ +D
Sbjct: 251 ---QCAGDLWIVD 260



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 9/117 (7%)

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDS 390
           + G     + +       D  +SP G  + ++     +    I + + DG +  L+V+ +
Sbjct: 494 TAGGQVTELIRSVNGPVRDLAFSPDGTWLTWSHPGIGRTLRQIKMARIDGPEGTLVVDVT 553

Query: 391 N----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
           N     + P ++  GR L F   +  D    +++ DL+   G    L+   +    P
Sbjct: 554 NGRFEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSP 610



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 5/85 (5%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM----DIYSVDLQSNATER-LT 298
           T   +  + I +    +    FS +G     S            +  +D         +T
Sbjct: 494 TAGGQVTELIRSVNGPVRDLAFSPDGTWLTWSHPGIGRTLRQIKMARIDGPEGTLVVDVT 553

Query: 299 NTLFINISASYSPDSSQIVFESDRE 323
           N  F + +  ++ D   + F S R 
Sbjct: 554 NGRFEDENPVFTRDGRYLAFLSWRG 578



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 77/236 (32%), Gaps = 25/236 (10%)

Query: 164 QSITGEKGDFNSRILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           + +  + G   S  +FV   +          +L     DG  +R      D        S
Sbjct: 185 ERLLPDLGGHLSAPMFVGGRIAFLSDHEGVGNLYSCAYDGTGLRR-HTDHDAFYARNAAS 243

Query: 221 PNQQKVAYA---------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--G 269
            +  +V Y                  R   +     RA +R     +       S +  G
Sbjct: 244 -DGTRVVYQCAGDLWIVDDLAPGSAPRRLDVRLSGPRAGRRTHQVPAAQHVGGISVDETG 302

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQL 328
           + + + V+      +Y +  +      + +T  + +       +S +I + +D EG++ +
Sbjct: 303 RASAVVVRGS----LYWLTHRDGPARTIADTPGVRVRLPEMLGESGRIAYVTDAEGEDAV 358

Query: 329 YVM----QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +      + G   +R++  +     + V  P GD +A     G    + V + D 
Sbjct: 359 EISYLPRATGGRAARRLASGRLGRVLELVSDPAGDRLAVASHDGRLLILDVAEPDT 414



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 6/98 (6%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM---DTRIDRAPKRIGNF 256
           G  +  L  S +  + +  FSP+   + ++       LR   M   D         + N 
Sbjct: 496 GGQVTELIRSVNGPVRDLAFSPDGTWLTWSHPGIGRTLRQIKMARIDGPEGTLVVDVTNG 555

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           R     P F+ +G+       +         D+ +   
Sbjct: 556 RFEDENPVFTRDGRYLAFLSWRGFDP---VYDVHTGDL 590


>gi|282865496|ref|ZP_06274547.1| peptidase S41 [Streptomyces sp. ACTE]
 gi|282559540|gb|EFB65091.1| peptidase S41 [Streptomyces sp. ACTE]
          Length = 1134

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 55/170 (32%), Gaps = 27/170 (15%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+   R+ +  PRFS +G R   +  +    +I+   +      RLT     +     +S
Sbjct: 43  RVTVDRTRVSHPRFSPDGSRIAYTTWRTLDPEIHLAPVDGGPARRLTYWGSTDARVCGWS 102

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD              Q+  +    S  +  S    A       SP G L       G  
Sbjct: 103 PD---------PGDSSQILAVS---SHNQPFSYFSWAYSVPTDGSPGGKL-----PWGPV 145

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             I V   DG +  LL+       P          + R + G  G +L+ 
Sbjct: 146 SDIAVADIDGERRTLLLTGKPPHEPA--------AWKRYRGGAMG-RLWL 186



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 35/151 (23%)

Query: 326 EQLYVMQSNGSDQK-----RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           + L+V     + Q+     R++ D+      P +SP G  IA+T +      I +   DG
Sbjct: 24  DDLWVAPLAPAGQRPGRAWRVTVDR-TRVSHPRFSPDGSRIAYTTWRTLDPEIHLAPVDG 82

Query: 381 SQERLLV--EDSNLQAPTWSPS---GRSL---------------IFSRKKDGDTG----- 415
              R L     ++ +   WSP       +                +S   DG  G     
Sbjct: 83  GPARRLTYWGSTDARVCGWSPDPGDSSQILAVSSHNQPFSYFSWAYSVPTDGSPGGKLPW 142

Query: 416 ---SKLYSIDLNGRNETLINTPAYASDP-QW 442
              S +   D++G   TL+ T     +P  W
Sbjct: 143 GPVSDIAVADIDGERRTLLLTGKPPHEPAAW 173



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 68/203 (33%), Gaps = 23/203 (11%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN----QQKVAYAT 230
           SRI + +   +       + +   DG   R LT           +SP+     Q +A ++
Sbjct: 61  SRIAYTTWRTLDP----EIHLAPVDGGPARRLTYWGSTDARVCGWSPDPGDSSQILAVSS 116

Query: 231 YDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNG--KRALISVQKDEAMDIYSV 287
           ++       +      D +P  ++       +A     +G  +  L++ +       +  
Sbjct: 117 HNQPFSYFSWAYSVPTDGSPGGKLPWGPVSDIAVA-DIDGERRTLLLTGKPPHEPAAWKR 175

Query: 288 DLQSN-------ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
                           L +      +  +     +I F SD EG   LY  + +G D +R
Sbjct: 176 YRGGAMGRLWLHGERLLPDIGGHLDAPMFV--GGRIAFLSDHEGVGNLYSCRPDGGDLRR 233

Query: 341 ISQDKEASYFDPVWSPQGDLIAF 363
              D +A Y     S  G+ + +
Sbjct: 234 -HTDHDAFYARHASS-DGNRVVY 254



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 86/270 (31%), Gaps = 37/270 (13%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAP 250
             +  RDG   R +       +  P    +  +VAY T  D    +   YL     DR P
Sbjct: 319 YWLTHRDG-PARTIADEPGVRVRLPEMLGSSGQVAYITDADGADAVEIAYLPRASGDRPP 377

Query: 251 KRIGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           +R+ + +   +        G R  ++      +              L +T         
Sbjct: 378 RRLASGQLGRVHEMVADPEGTRLALASNDGRLL--------------LLDTAGDETEQEV 423

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGS----------DQKRISQDKEASYFDPVWSPQGD 359
           +      + +S       L  ++  GS              + +       D  +SP G 
Sbjct: 424 AALDGVALLDSADAQAALLDAIEEQGSAPPPPPPAEAQVTELIRSVNGPVRDLAFSPDGA 483

Query: 360 LIAFTKFSGEKF--AIGVMKKDGSQERLLVEDSN----LQAPTWSPSGRSLIFSRKKDGD 413
            + ++     +    I + +  G    ++V+ +N     + P ++  GR L F   +  D
Sbjct: 484 WLTWSHPGIGRSLRKIKLARISGPDAPVIVDVTNGRFEDENPVFTGDGRYLAFLSWRGFD 543

Query: 414 TGSKLYSIDLN---GRNETLINTPAYASDP 440
               +++ DL+   G    L+   +    P
Sbjct: 544 PVYDVHTGDLSFPLGCRPYLVPLSSATPSP 573


>gi|302685411|ref|XP_003032386.1| hypothetical protein SCHCODRAFT_45200 [Schizophyllum commune H4-8]
 gi|300106079|gb|EFI97483.1| hypothetical protein SCHCODRAFT_45200 [Schizophyllum commune H4-8]
          Length = 512

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 99/309 (32%), Gaps = 37/309 (11%)

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI--AHTIS-------DDIYQ--------- 164
                 RLWD K  K+I G+         R +  +H  +       D   +         
Sbjct: 74  SYDCTLRLWDAKAGKEI-GEAMQGHTDWVRSVVFSHDGACIVSGGDDRTVRIWDIDTRQP 132

Query: 165 ---SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
              SI  E    +  I    + V SG    ++ V D  G    +        ++   FS 
Sbjct: 133 LGDSIRHEGWVRSVSISHDGKYVASGSDDGTIHVWDAGGRQQVWSLHGHIGWVYAVAFSS 192

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  ++   +   +D +R++ + +   +    +     ++ +  FS +GK    S   D  
Sbjct: 193 DSTRI--VSGGHDDTVRIWDVASGA-QVGDDLRGHTELVFSVAFSPDGKHVA-SGSDDGT 248

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR- 340
           + ++ V      +           S + SPD   IV  S     + + +  +   +    
Sbjct: 249 IRVWDVREAKKESGIPVEHTRDVTSVACSPDGKYIVSGS---WDKTVRLWNAETGEPVGD 305

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL----LVEDSNLQAPT 396
                +       +SP    IA      +   + V   +    ++       ++ ++  +
Sbjct: 306 PMTGHDGEVNCVTFSPDSTRIASAS---DDRKVRVWDVETRLPQIGEPLYGHENYVRFVS 362

Query: 397 WSPSGRSLI 405
           +S  G  + 
Sbjct: 363 FSNDGLYIA 371



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 87/240 (36%), Gaps = 15/240 (6%)

Query: 185 VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VSG    ++ + +   G  +       D  +    FSP+  ++A A+ D +  +RV+ ++
Sbjct: 284 VSGSWDKTVRLWNAETGEPVGDPMTGHDGEVNCVTFSPDSTRIASASDDRK--VRVWDVE 341

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTL 301
           TR+ +  + +    + +    FS++G     S   D ++ ++  D +S    R  L    
Sbjct: 342 TRLPQIGEPLYGHENYVRFVSFSNDGLYIA-SGSDDHSIRLW--DAKSQLQWRGPLAGHQ 398

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDL 360
              +S ++SPD   +V  S       + +      +Q                +SP G  
Sbjct: 399 DYVLSLAFSPDDVYLVSGSH---DRTIRLWDVKTGEQMGGPLTGHTDRVRSVSFSPDGKY 455

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +             V  +      L   +  + +  ++  G  ++      GD   +++ 
Sbjct: 456 VVSGSDDRTVRVWSVQTRQQVGSSLRGHEGWVNSVAFTSDGARIV---SGSGDGTIRVWD 512



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 77/252 (30%), Gaps = 24/252 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  I          ++   FSP+   +A      +D            +  + +      
Sbjct: 1   GRQIGSAMRGHGDRVWSVAFSPDGSTIA---SGSDDCTVRLWDAMTGQQQGQALRGHAGR 57

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + +  FS +G   ++S   D  + ++         E +        S  +S D + IV  
Sbjct: 58  VKSVAFSPDGTT-VVSASYDCTLRLWDAKAGKEIGEAMQGHTDWVRSVVFSHDGACIVSG 116

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            D      + +   +       S   E        S  G  +A     G    I V    
Sbjct: 117 GD---DRTVRIWDIDTRQPLGDSIRHEGWVRSVSISHDGKYVASGSDDGT---IHVWDAG 170

Query: 380 GSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI--------DLNGRNET 429
           G Q+   +      + A  +S     ++       D   +++ +        DL G  E 
Sbjct: 171 GRQQVWSLHGHIGWVYAVAFSSDSTRIV---SGGHDDTVRIWDVASGAQVGDDLRGHTE- 226

Query: 430 LINTPAYASDPQ 441
           L+ + A++ D +
Sbjct: 227 LVFSVAFSPDGK 238


>gi|108803798|ref|YP_643735.1| peptidase S9, prolyl oligopeptidase active site region [Rubrobacter
           xylanophilus DSM 9941]
 gi|108765041|gb|ABG03923.1| peptidase S9, prolyl oligopeptidase active site region [Rubrobacter
           xylanophilus DSM 9941]
          Length = 672

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 62/176 (35%), Gaps = 11/176 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S ++    S    +    + ++  D A+    T + D     PR SP+ ++V     +  
Sbjct: 222 STVVATRWSDPEDVAGRVMELVAVDAASGGVRTLAGDAWYSSPRCSPDGRRVVAVREERS 281

Query: 235 DILR-----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
              R     ++  D R     + +  F     AP +SS+ +  L     D    ++    
Sbjct: 282 GPGRPGDRSLWAFDLRTGEGREILEGFDLWPEAPAWSSDSRSVLFIASCDGRAPVFRAPA 341

Query: 290 QSNATERLT-NTLFINISASYSPDSSQI-VFESDREGKEQLYVMQS--NGSDQKRI 341
           +    ERLT    F ++  +  P+   +    S          + +   G + +R+
Sbjct: 342 EGGPAERLTGEGSFSDLCPA--PEGGTVYALRSGVGEPPHPVALDAREPGGEPRRL 395



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 57/186 (30%), Gaps = 15/186 (8%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRF--SSNGKRALISVQKDEAM------DIYSVDLQSNAT 294
             RI+   + +      +    F  + +G   + +   D         ++ +VD  S   
Sbjct: 193 GGRIEEPRELLSGPPGSLALSSFDITPDGSTVVATRWSDPEDVAGRVMELVAVDAASGGV 252

Query: 295 ERLTNTLFINISASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDKEAS 348
             L        S   SPD  ++V   +      R G   L+       + + I +  +  
Sbjct: 253 RTL-AGDAWYSSPRCSPDGRRVVAVREERSGPGRPGDRSLWAFDLRTGEGREILEGFDLW 311

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
              P WS     + F      +  +     +G     L  + +      +P G ++   R
Sbjct: 312 PEAPAWSSDSRSVLFIASCDGRAPVFRAPAEGGPAERLTGEGSFSDLCPAPEGGTVYALR 371

Query: 409 KKDGDT 414
              G+ 
Sbjct: 372 SGVGEP 377



 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 50/143 (34%), Gaps = 18/143 (12%)

Query: 311 PDSSQIVFES-----DREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           PD S +V        D  G+  +L  + +     +  +   +A Y  P  SP G  +   
Sbjct: 219 PDGSTVVATRWSDPEDVAGRVMELVAVDAASGGVR--TLAGDAWYSSPRCSPDGRRVVAV 276

Query: 365 K------FSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGS 416
           +            ++        + R ++E  +L  +AP WS   RS++F    DG    
Sbjct: 277 REERSGPGRPGDRSLWAFDLRTGEGREILEGFDLWPEAPAWSSDSRSVLFIASCDGRAP- 335

Query: 417 KLYSIDLNGRNETLINTPAYASD 439
            ++     G     +      SD
Sbjct: 336 -VFRAPAEGGPAERLTGEGSFSD 357



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 89/310 (28%), Gaps = 78/310 (25%)

Query: 211 DQILFEPRFSP-----NQQKVAYATYDDEDILRVY---LMDTRIDRAPKRIGNFRSMILA 262
           + ++  PRFS      +  ++  A    +   R     L +      P+RI        A
Sbjct: 10  ETLISLPRFSGLALSRDGGRLVAAVARPDRKRRHLVTALFELEDGGPPRRITRSARGEGA 69

Query: 263 PRFSSNGKRALISVQKD----------EAMDIYSVDLQSNATERLTNTLF---------- 302
             FS +G    +S + D          E   ++ +         L +             
Sbjct: 70  AAFSPDGSLLFVSRRPDPEEAGEEDGGERPALWLLPP-GGEAYPLASPPGGVEGFAVARE 128

Query: 303 ----------INISASYSPDSSQ-----------------IVFESDREGKEQ---LYVMQ 332
                        +A +  D+                    V   DR    +   LY+  
Sbjct: 129 SGDLVIAAPARPGAAGWKEDAEWEKARREAGVEASLFEGYPVRFWDRYLGPRERRLYISP 188

Query: 333 SNGS-----DQKRISQDKEASY--FDPVWSPQGDLIAFTKFS------GEKFAIGVMKKD 379
             G      + + +      S        +P G  +  T++S      G    +  +   
Sbjct: 189 LPGEGGRIEEPRELLSGPPGSLALSSFDITPDGSTVVATRWSDPEDVAGRVMELVAVDAA 248

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG----SKLYSIDL-NGRNETLINT- 433
               R L  D+   +P  SP GR ++  R++    G      L++ DL  G    ++   
Sbjct: 249 SGGVRTLAGDAWYSSPRCSPDGRRVVAVREERSGPGRPGDRSLWAFDLRTGEGREILEGF 308

Query: 434 PAYASDPQWV 443
             +   P W 
Sbjct: 309 DLWPEAPAWS 318


>gi|186682570|ref|YP_001865766.1| hypothetical protein Npun_F2232 [Nostoc punctiforme PCC 73102]
 gi|186465022|gb|ACC80823.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 343

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 94/279 (33%), Gaps = 33/279 (11%)

Query: 141 GKKFFS--SPASWRKIAHT-ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           GK F     P+   ++     ++DIY       G          +++VSG +  ++ V +
Sbjct: 79  GKSFTVWHLPSQQPQLTLKGHANDIYDLALSADG----------QTLVSGSLDKTIKVWN 128

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
                +++      +++     +PNQQ +  A+ D      + + +    +    +    
Sbjct: 129 LATGKLKFTLKGHSEVVNALAIAPNQQTIVSASSDK----TIKMWNLATGQLTSTLAQTP 184

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTLFINISASYSPDSSQI 316
             ++    SS+GK  +     D +  I   DL        LT    +  + + S D   +
Sbjct: 185 DAVITLVLSSDGKTLV---SGDSSNHITVWDLVTGRKRTTLTGHYGVVSALAISRDGQLL 241

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-V 375
                    +Q+ V         +             +SP G  +     +G  +    V
Sbjct: 242 A----SGSAKQVKVWNLTTGKLLQDFGGFYFPQITIAFSPNGQSLI----AGGGYKPYRV 293

Query: 376 MKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDG 412
                      + D +  +    +S  G++L FS  +DG
Sbjct: 294 WNLATGNMEATLPDVSNWSGAMVFSRDGKTL-FSGTQDG 331


>gi|170727721|ref|YP_001761747.1| transcriptional regulator CadC [Shewanella woodyi ATCC 51908]
 gi|169813068|gb|ACA87652.1| transcriptional regulator, CadC [Shewanella woodyi ATCC 51908]
          Length = 693

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 53/287 (18%), Positives = 102/287 (35%), Gaps = 62/287 (21%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            D +   P++S + + V + T        +         A +   +F S++     S N 
Sbjct: 300 SDGMHRMPKYSLDGRSVFFVTSTSNSYTVLNQYHLADGVAEQLNSDFHSILSVEPMSDN- 358

Query: 270 KRALISVQKDEAMDIYSVDLQSNATER--------------------------------- 296
            +  IS + D    I+S+ L S   E+                                 
Sbjct: 359 -QLWISGKLDGRFAIWSMSLGSKELEKVIDNHSSEYQSQLSSANNGTFNLVYKNWHRNIN 417

Query: 297 -----LTNTL------FINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----DQKR 340
                LT+         I+I+A YSP++      S+R G  ++++ ++N S     + ++
Sbjct: 418 VEQYGLTDYPQMLNSDAIDINAIYSPETKTFFSVSNRSGSFEIWLHKANESQHKANESQQ 477

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPT 396
           +++ K  S   P+ S     +AF         + ++  +  Q     ++ V    L+   
Sbjct: 478 MTRLKANSLGQPLLSQDSKQLAFLNKKSAFSELTILDIESQQLLMSYQVPVNTHLLE--- 534

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL-INTPAYASDPQ 441
           WS    +L  S  +       L  IDL NG+   L +N   +  +P 
Sbjct: 535 WSNRSETLYVSVLEQKQYT--LAMIDLSNGKLTKLAVNAGGFVKEPT 579



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 75/199 (37%), Gaps = 8/199 (4%)

Query: 193 LCVMDRDGANIRY---LTPSRDQILFEPRFSPNQQKVAYA-TYDDEDILRVYLMDTRIDR 248
           L   D D    ++   L    D  +  P  SP+Q+ V +  ++ +    +++LMD + ++
Sbjct: 146 LTRYDSDRQVHQFRSTLLTHSDSQVEMPALSPSQKSVLFIQSFPENRFNQIFLMDLQTNK 205

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
               +    ++   P + ++GK             +   +++S   + L +      S  
Sbjct: 206 KVA-LTEQDAIYRFPLWGASGKYIYYIKCIKRDCQLIQDNIESREKQVLFSRGEEITSFD 264

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            SP   + V +      ++L ++  +   +    +  +  +  P +S  G  + F   + 
Sbjct: 265 ISPLEQEAVLDVIEGENQRLALLYFD-KPEPLYMELSDGMHRMPKYSLDGRSVFFVTSTS 323

Query: 369 EKFAI--GVMKKDGSQERL 385
             + +       DG  E+L
Sbjct: 324 NSYTVLNQYHLADGVAEQL 342



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 67/204 (32%), Gaps = 6/204 (2%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N + +MD    N +     +D I   P +  + + + Y      D   +   D    R  
Sbjct: 194 NQIFLMDL-QTNKKVALTEQDAIYRFPLWGASGKYIYYIKCIKRDCQLI--QDNIESREK 250

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + + +    I +   S   + A++ V + E   +  +         +  +  ++    YS
Sbjct: 251 QVLFSRGEEITSFDISPLEQEAVLDVIEGENQRLALLYFDKPEPLYMELSDGMHRMPKYS 310

Query: 311 PDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            D   + F  S       L          ++++ D  +       S     +  +     
Sbjct: 311 LDGRSVFFVTSTSNSYTVLNQYHLADGVAEQLNSDFHSILSVEPMSDN--QLWISGKLDG 368

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ 393
           +FAI  M     +   ++++ + +
Sbjct: 369 RFAIWSMSLGSKELEKVIDNHSSE 392


>gi|296120844|ref|YP_003628622.1| serine/threonine protein kinase-related protein [Planctomyces
            limnophilus DSM 3776]
 gi|296013184|gb|ADG66423.1| Serine/threonine protein kinase-related protein [Planctomyces
            limnophilus DSM 3776]
          Length = 1856

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 96/291 (32%), Gaps = 34/291 (11%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLW+++D ++++        AS R           Q I     D + ++           
Sbjct: 1565 RLWNLRDGREMMSFSPNGVVASARYSPD------NQWIVTSSWDNSVKVWKA-------- 1610

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                       G ++  L       +    FSP+ + +  A+ D     +++       +
Sbjct: 1611 ---------ATGESMVRLEGGHTSAVNMASFSPDGELILTASDD--GTAKLWDWKAAPPK 1659

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SA 307
              K +G     + +  F+ +G R + +   D+   ++  D  +    ++       + SA
Sbjct: 1660 VVKVLGLHTGRVRSAIFNHDGSRIV-TTSSDKTARLW--DTTTGECLQIFQGHEWPVLSA 1716

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + S D   ++  S+    +   +       +  +     A       SP    +  T   
Sbjct: 1717 ALSEDGKLLLTGSE---DKTARLWNVATGRELFVLAGHTAPVTSVDISPDATRLV-TGSQ 1772

Query: 368  GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             E   +   +       L     ++ +  +SP GR ++ +  +DG     L
Sbjct: 1773 DETVKLWDTRTSNEILTLSRHTQDVTSVAFSPDGRQIL-TGSRDGTAIIWL 1822



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 88/263 (33%), Gaps = 34/263 (12%)

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
             F  +   ++           L  ++  G  +R L    D +L    FS + +++   +Y
Sbjct: 957  AFQPQGDLIALGGSEAGAYLQLWSVES-GERVRILKGHADGVLSV-EFSRDGKQLLSTSY 1014

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D      + L D       K        + + RFS +GKR + S  +D  + ++ V+   
Sbjct: 1015 DK----SIRLWDVETGEVVKTFEGHNWWVWSARFSPDGKRIV-SAGQDGIVLVWDVE-SG 1068

Query: 292  NATERLTNTLFINISASYSPDSSQIV------------------FESDR-------EGKE 326
                  T       +A++ P  + +                   F+  R         ++
Sbjct: 1069 RHLPPFTGHEGPVFTATFDPTGNYVASGGYDRTIQLWSPENIQPFDFRRVAEEVQESSEK 1128

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             +  + +    + +I +  E +     +S  G L+  +        +  + +  +   L 
Sbjct: 1129 AVLEISAEQRSEAKILKGHEGAVRALHFSRDGGLLL-SGAQDNTARLWELPQGRATLVLR 1187

Query: 387  VEDSNLQAPTWSPSGRSLIFSRK 409
              D  ++A  +S   R ++ +  
Sbjct: 1188 GHDGWVRACDFSLGDRQILTASY 1210



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 60/187 (32%), Gaps = 21/187 (11%)

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTN 299
            +   +       +      + A  F   G    +   +  A   ++SV  +S    R+  
Sbjct: 934  IFQLKDGAPKNVLKTQGQYVHAVAFQPQGDLIALGGSEAGAYLQLWSV--ESGERVRILK 991

Query: 300  TLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                 + S  +S D  Q++  S     + + +      +  +  +      +   +SP G
Sbjct: 992  GHADGVLSVEFSRDGKQLLSTSY---DKSIRLWDVETGEVVKTFEGHNWWVWSARFSPDG 1048

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS----PSGRSLIFSRKKDG-D 413
              I      G    + V   +    R L   +  + P ++    P+G  +       G D
Sbjct: 1049 KRIVSAGQDG---IVLVWDVESG--RHLPPFTGHEGPVFTATFDPTGNYVA----SGGYD 1099

Query: 414  TGSKLYS 420
               +L+S
Sbjct: 1100 RTIQLWS 1106



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/289 (12%), Positives = 92/289 (31%), Gaps = 62/289 (21%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++++SG ++  + +  R+   +        + + +  ++ + +K   A+ D+     V +
Sbjct: 1376 KTILSGDLRGRILLWSRETGGLLGKLDGHSRRVQKIIYATDGRKAYSASADN----TVAV 1431

Query: 242  MDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             D       +  +      +L    S +GK+ + S   +      + D +  +  RL   
Sbjct: 1432 WDLGSMAEIRPAVMKHPESVLTMALSPDGKQLVTSAADNTLRLWSTADAKLVSEYRLPEG 1491

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYV------------------------------ 330
            +  ++    S D   +   +    + ++ V                              
Sbjct: 1492 MVNSLE--ISRDGRLLAIANAETRQAEILVLPGFKRIPMEMGGSVVDLKKRGALLWAVAF 1549

Query: 331  -------MQSNGSDQKR---------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                   M   G+D +          +S           +SP    I  + +      + 
Sbjct: 1550 GPEAETLMTIGGTDARLWNLRDGREMMSFSPNGVVASARYSPDNQWIVTSSWDNS---VK 1606

Query: 375  VMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            V K    +  + +E  +   +   ++SP G  ++ +     D  +KL+ 
Sbjct: 1607 VWKAATGESMVRLEGGHTSAVNMASFSPDGELILTASD---DGTAKLWD 1652



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 56/340 (16%), Positives = 116/340 (34%), Gaps = 81/340 (23%)

Query: 163  YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSP 221
            ++ +  +   F+       + + +  + N+L + +   G+  + L  +     F+   S 
Sbjct: 1279 HEFLASKAIFFDGG-----KRLATAGVDNTLRLWEVETGSQTKLLEHTGRSAAFD--IST 1331

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK---------RA 272
            + + +   +    D   V L D         +   +    A   S +GK         R 
Sbjct: 1332 DGKWLVTGS----DRKVVVLRDLSTLETIFELTGHQHEPTAVAISPDGKTILSGDLRGRI 1387

Query: 273  LISVQKDEAMDIYSVDLQSNATERL---TNTL------FINISASY-------------- 309
            L+  ++   + +  +D  S   +++   T+          N  A +              
Sbjct: 1388 LLWSRETGGL-LGKLDGHSRRVQKIIYATDGRKAYSASADNTVAVWDLGSMAEIRPAVMK 1446

Query: 310  ----------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQ 357
                      SPD  Q+V  S  +   +L+    + +D K +S  +  E        S  
Sbjct: 1447 HPESVLTMALSPDGKQLV-TSAADNTLRLW----STADAKLVSEYRLPEGMVNSLEISRD 1501

Query: 358  GDLIAFTKFSGEKFAIGV--------MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            G L+A       +  I V        M+  GS   L    + L A  + P   +L+    
Sbjct: 1502 GRLLAIANAETRQAEILVLPGFKRIPMEMGGSVVDLKKRGALLWAVAFGPEAETLM---- 1557

Query: 410  KDGDTGSKLYSIDLNGRNET------LINTPAYASDPQWV 443
              G T ++L+++  +GR         ++ +  Y+ D QW+
Sbjct: 1558 TIGGTDARLWNLR-DGREMMSFSPNGVVASARYSPDNQWI 1596



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 73/211 (34%), Gaps = 15/211 (7%)

Query: 219  FSPNQQKVAYATYDDEDILRVYL-----MDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             S + + +A A  +      + L     +   +  +   +    +++ A  F    +   
Sbjct: 1498 ISRDGRLLAIANAETRQAEILVLPGFKRIPMEMGGSVVDLKKRGALLWAVAFGPEAE--- 1554

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             ++      D    +L+        +   +  SA YSPD+  IV  S  +   +++   +
Sbjct: 1555 -TLMTIGGTDARLWNLRDGREMMSFSPNGVVASARYSPDNQWIV-TSSWDNSVKVWKA-A 1611

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNL 392
             G    R+     ++     +SP G+LI      G               ++L +    +
Sbjct: 1612 TGESMVRLEGGHTSAVNMASFSPDGELILTASDDGTAKLWDWKAAPPKVVKVLGLHTGRV 1671

Query: 393  QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            ++  ++  G  ++ +     D  ++L+    
Sbjct: 1672 RSAIFNHDGSRIVTTSS---DKTARLWDTTT 1699



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 54/377 (14%), Positives = 112/377 (29%), Gaps = 75/377 (19%)

Query: 108  AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            A  +++    ++G            RLWDV+  + +  K F                   
Sbjct: 994  ADGVLSVEFSRDGKQLLSTSYDKSIRLWDVETGEVV--KTFEG----------------- 1034

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                     +++R     + +VS      + V D +           +  +F   F P  
Sbjct: 1035 ----HNWWVWSARFSPDGKRIVSAGQDGIVLVWDVESGRHLPPFTGHEGPVFTATFDPTG 1090

Query: 224  QKVAYATYDD------------------------EDILRVYLMDTRIDRAPKRIGNFRSM 259
              VA   YD                              V  +        K +      
Sbjct: 1091 NYVASGGYDRTIQLWSPENIQPFDFRRVAEEVQESSEKAVLEISAEQRSEAKILKGHEGA 1150

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + A  FS +G   L+S  +D    ++ +  Q  AT  L        +  +S    QI+  
Sbjct: 1151 VRALHFSRDGG-LLLSGAQDNTARLWELP-QGRATLVLRGHDGWVRACDFSLGDRQILTA 1208

Query: 320  SDREGKEQLYVMQSNGSDQ-----KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            S       +    ++  ++      R+ +  E +     W+P    I     +G      
Sbjct: 1209 SY---DSTVCEWSTDRYEEFRVLNGRVFEGHEDAVLSAAWAPNQQSIV---TAGRDRTAR 1262

Query: 375  VMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
                +   ++L  ++ +    +   +   G+ L        D   +L+ ++   + + L 
Sbjct: 1263 TWNVETGDKQLQFKEGHEFLASKAIFFDGGKRLA---TAGVDNTLRLWEVETGSQTKLLE 1319

Query: 432  NTPAYA-----SDPQWV 443
            +T   A     +D +W+
Sbjct: 1320 HTGRSAAFDISTDGKWL 1336



 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 51/310 (16%), Positives = 113/310 (36%), Gaps = 31/310 (10%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQI---IGKKFFSSPASWRKIAHTIS----DDIYQSIT 167
            R++  G+D + +   +WDV+  + +    G +     A++    + ++    D   Q  +
Sbjct: 1050 RIVSAGQDGIVL---VWDVESGRHLPPFTGHEGPVFTATFDPTGNYVASGGYDRTIQLWS 1106

Query: 168  GEKG-DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
             E    F+ R +      V    + ++  +  +  +   +    +  +    FS +   +
Sbjct: 1107 PENIQPFDFRRV---AEEVQESSEKAVLEISAEQRSEAKILKGHEGAVRALHFSRDGGLL 1163

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                 D+       L +    RA   +      + A  FS  G R +++   D  +  +S
Sbjct: 1164 LSGAQDN----TARLWELPQGRATLVLRGHDGWVRACDFSL-GDRQILTASYDSTVCEWS 1218

Query: 287  VDLQSNATERLTNTLFINI------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D       R+ N            SA+++P+   IV  + R+   + + +++ G  Q +
Sbjct: 1219 TDRY--EEFRVLNGRVFEGHEDAVLSAAWAPNQQSIV-TAGRDRTARTWNVET-GDKQLQ 1274

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
              +  E      ++   G  +A T        +  ++  GSQ +LL       A   S  
Sbjct: 1275 FKEGHEFLASKAIFFDGGKRLA-TAGVDNTLRLWEVET-GSQTKLLEHTGRSAAFDISTD 1332

Query: 401  GRSLIFSRKK 410
            G+ L+    +
Sbjct: 1333 GKWLVTGSDR 1342


>gi|219852182|ref|YP_002466614.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Methanosphaerula palustris E1-9c]
 gi|219546441|gb|ACL16891.1| Periplasmic component of the Tol biopolymer transport system-like
           protein [Methanosphaerula palustris E1-9c]
          Length = 448

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 80/256 (31%), Gaps = 17/256 (6%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDT 244
            +N + + + D             +  +P F    + +  ++ +          + L D 
Sbjct: 79  FRNGVWMNNPDIYQYTLSQKQETAVSTDPSFQEYPAVDGDRIVWEDQRTGQFGDIRLYDL 138

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +         N       P  S  G   +    ++   DIY  DL +     +       
Sbjct: 139 KTGTESVVCSNEF-DQTNPAIS--GDIVVWQDSRNGNWDIYGYDLATGGGFSVCTADGDQ 195

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              + S   + IV++ +R G   +Y        +  I    +   + P  S  G+ + + 
Sbjct: 196 QYPAIS--GNTIVWQDNRNGNWDIYGFDIATKTEFPICIAGKDQQY-PAIS--GNTVVWQ 250

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 + I         E  + +D   Q  P        +++   +  DT S +Y  DL
Sbjct: 251 DNRNGNWDIYGYDLATKTEFQVTKDPADQILPAV--DSNRIVWEDHR--DTLSGIYLYDL 306

Query: 424 NGRNETLINTPAYASD 439
               E+ I++   A  
Sbjct: 307 TNGTESRISSSGTAQH 322



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 66/216 (30%), Gaps = 14/216 (6%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           S +     P  S +   +            +Y  D         +         P  S  
Sbjct: 148 SNEFDQTNPAISGD---IVVWQDSRNGNWDIYGYDLATGGGFS-VCTADGDQQYPAIS-- 201

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   +    ++   DIY  D+ +     +          + S   + +V++ +R G   +
Sbjct: 202 GNTIVWQDNRNGNWDIYGFDIATKTEFPICIAGKDQQYPAIS--GNTVVWQDNRNGNWDI 259

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV 387
           Y        + ++++D        V     + I +         I +     G++ R+  
Sbjct: 260 YGYDLATKTEFQVTKDPADQILPAV---DSNRIVWEDHRDTLSGIYLYDLTNGTESRISS 316

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +    P  +  G +++   ++ G  G  +  I L
Sbjct: 317 SGTAQHNPAIA--GNNVVSELERSGGVGRAINLITL 350



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 61/179 (34%), Gaps = 15/179 (8%)

Query: 258 SMILAPRFSSNGKRALISVQKDE----AMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           S    P  S  G   +    ++       DIY   L       ++         +   D 
Sbjct: 62  SYQSNPAVS--GDHVVWEDFRNGVWMNNPDIYQYTLSQKQETAVSTDPSFQEYPAV--DG 117

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +IV+E  R G+     +    +  + +    E    +P  S  GD++ +       + I
Sbjct: 118 DRIVWEDQRTGQFGDIRLYDLKTGTESVVCSNEFDQTNPAIS--GDIVVWQDSRNGNWDI 175

Query: 374 GVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
                  G    +   D + Q P  S  G ++++   ++G+    +Y  D+  + E  I
Sbjct: 176 YGYDLATGGGFSVCTADGDQQYPAIS--GNTIVWQDNRNGNW--DIYGFDIATKTEFPI 230


>gi|94967087|ref|YP_589135.1| peptidase S9B, dipeptidylpeptidase IV-like [Candidatus Koribacter
           versatilis Ellin345]
 gi|94549137|gb|ABF39061.1| dipeptidyl-peptidase IV [Candidatus Koribacter versatilis Ellin345]
          Length = 747

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 92/299 (30%), Gaps = 88/299 (29%)

Query: 219 FSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIG----------------------- 254
           +SP+  KV++   DD  D   +Y +D      P  +                        
Sbjct: 50  WSPDGTKVSFVQRDDSGDNGALYYVDVTTGAKPAVLVAQEKLTEMKPPAKTKSDDREKDN 109

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             R  + A  ++ + K  L     D    +++ DL +  +  + +         +SP   
Sbjct: 110 RERYSVAAYHWAPDSKHILF----DSGGALWNYDLAAGKSAMIASAEGGLGDPKFSPSGD 165

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQG 358
           +I +  + +    LYV   +G   KRI++   A+  +                  WSP G
Sbjct: 166 RISYLREHD----LYVSGLDG-KAKRITEGGNANVLNGEVDWVYAEELNVRSNYFWSPNG 220

Query: 359 DLIAFTKFSGEK------------------------------FAIGVMKKDGSQER---L 385
             I + +    K                                +GV+   G + +   L
Sbjct: 221 KQIVYLQMDQTKVPTYPITDYIPTQATVDEEKFPKPGDPNPSVKLGVVSATGGKTKWIEL 280

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWV 443
              D+ +    W   G    F   +       LY +D  +GR +  +      + P W+
Sbjct: 281 PATDAYISRFGWVHDGLLYAFVLNRP-QNKLDLYLVDAKSGRTQVAMT----ETSPSWI 334



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 85/262 (32%), Gaps = 72/262 (27%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+ + + +   D    L  Y +          I +    +  P+FS +G R     + 
Sbjct: 120 WAPDSKHILF---DSGGALWNYDLAAGKSAM---IASAEGGLGDPKFSPSGDRISYLREH 173

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINI-----------------SASYSPDSSQIVF--- 318
           D    +Y   L     +R+T     N+                 +  +SP+  QIV+   
Sbjct: 174 D----LYVSGLDGK-AKRITEGGNANVLNGEVDWVYAEELNVRSNYFWSPNGKQIVYLQM 228

Query: 319 ---------------------------ESDREGKEQLYVMQSNGSDQKRI-SQDKEASYF 350
                                        D     +L V+ + G   K I     +A   
Sbjct: 229 DQTKVPTYPITDYIPTQATVDEEKFPKPGDPNPSVKLGVVSATGGKTKWIELPATDAYIS 288

Query: 351 DPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS---------PS 400
              W   G L AF       K  + ++     + ++ + ++   +P+W           +
Sbjct: 289 RFGWVHDGLLYAFVLNRPQNKLDLYLVDAKSGRTQVAMTET---SPSWIETNDEYKFIAN 345

Query: 401 GRSLIFSRKKDGDTGSKLYSID 422
           G  L+++  +DG T   LY +D
Sbjct: 346 GEKLLWTSWRDGHTHIYLYDLD 367



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 92/304 (30%), Gaps = 80/304 (26%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR------- 218
           I   +G         S   +S + ++ L V   DG   R        +L           
Sbjct: 148 IASAEGGLGDPKFSPSGDRISYLREHDLYVSGLDGKAKRITEGGNANVLNGEVDWVYAEE 207

Query: 219 --------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-----------SM 259
                   +SPN +++ Y   D   +    + D    +A      F             +
Sbjct: 208 LNVRSNYFWSPNGKQIVYLQMDQTKVPTYPITDYIPTQATVDEEKFPKPGDPNPSVKLGV 267

Query: 260 ILA----------PR---------FSSNGKRALISVQKDEA-MDIYSVDLQSNATERLTN 299
           + A          P          +  +G      + + +  +D+Y VD +S      T 
Sbjct: 268 VSATGGKTKWIELPATDAYISRFGWVHDGLLYAFVLNRPQNKLDLYLVDAKSGR----TQ 323

Query: 300 TLFINISASYS---------PDSSQIVFESDREGKEQLYVMQSNGSDQ-------KRISQ 343
                 S S+           +  ++++ S R+G   +Y+   + S+        +++++
Sbjct: 324 VAMTETSPSWIETNDEYKFIANGEKLLWTSWRDGHTHIYLYDLDKSNALAPLKLERQLTR 383

Query: 344 DKEASYFDPVWSPQG----DLIAFTKFSGE----KFAIGVMKKDGSQERLLVEDSNLQAP 395
                    V S  G      I +     E    +    V   DG  E++  +    +A 
Sbjct: 384 GD-----WDVVSIDGVNEKTGIVYYSSDQEDERQRQEYRVNLADGVSEKITKDHGTHEA- 437

Query: 396 TWSP 399
            ++P
Sbjct: 438 KFAP 441


>gi|145223214|ref|YP_001133892.1| peptidase S9 prolyl oligopeptidase [Mycobacterium gilvum PYR-GCK]
 gi|145215700|gb|ABP45104.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Mycobacterium gilvum PYR-GCK]
          Length = 668

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 4/200 (2%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
            +       + R +     D +  S      D    +   +       ++++L  +D + 
Sbjct: 185 ARTHLFDADTKRDVTPDPGDALRDSHFDVSPDGGFLVASWNVPAPGAALRSTLVRIDVNT 244

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            +   +    +     P  +P+   VAY            R+ L        P+ +    
Sbjct: 245 GDRAVIVDDPESDAGFPAIAPDGTSVAYLRETLSTPHHAPRITLALLHFGEEPRELTAHW 304

Query: 258 SMI-LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                +  +S++G   L++   D    I++VD Q+ A   L +  +       +P     
Sbjct: 305 DRWPTSVTWSADGSTLLVTADDDGRGPIFAVDPQTGAVRTLVSDDYTYTDVRAAPGGVIF 364

Query: 317 VFESDREGKEQLYVMQSNGS 336
              S     +    +  +G+
Sbjct: 365 ALRSSYAAPQHPVRIDPDGT 384



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 63/212 (29%), Gaps = 14/212 (6%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-----AMDIYSVDL 289
              R +L D    R                 S +G   + S             +  +D+
Sbjct: 183 GPARTHLFDADTKRDVTPDPGDALRDSHFDVSPDGGFLVASWNVPAPGAALRSTLVRIDV 242

Query: 290 QSNATERLTNTLFINIS-ASYSPDSSQIVFE----SDREGKEQLYVMQSN-GSDQKRISQ 343
            +     + +    +    + +PD + + +     S      ++ +   + G + + ++ 
Sbjct: 243 NTGDRAVIVDDPESDAGFPAIAPDGTSVAYLRETLSTPHHAPRITLALLHFGEEPRELTA 302

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGR 402
             +       WS  G  +  T     +  I  +       R LV +D        +P G 
Sbjct: 303 HWDRWPTSVTWSADGSTLLVTADDDGRGPIFAVDPQTGAVRTLVSDDYTYTDVRAAPGG- 361

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            +IF+ +           ID +G    L   P
Sbjct: 362 -VIFALRSSYAAPQHPVRIDPDGTITVLDCVP 392


>gi|119485706|ref|ZP_01619981.1| WD-repeat protein [Lyngbya sp. PCC 8106]
 gi|119457031|gb|EAW38158.1| WD-repeat protein [Lyngbya sp. PCC 8106]
          Length = 1223

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 65/197 (32%), Gaps = 16/197 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +    FSP+ + +A           V L +       K        + +  F
Sbjct: 640 ICQGHPNWVRSVAFSPDGEMLA----SGGADRLVKLWNVETGACIKTYSGHEGEVFSVAF 695

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREG 324
           SS+G +   S   D  + ++  D  +      L+       S ++SP + ++   S    
Sbjct: 696 SSDGTKIA-SGSGDCTVKLW--DTHTGQCLNTLSGHTDWVRSVAFSPTTDRVASGSQ--- 749

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +      D  +I  + +       ++  G L+A          I + K D  +  
Sbjct: 750 DQTMRIWDVKTGDCLKICHEHQGWVRSVAFNGNGSLLA---SGSSDHNINLWKGDTGEYL 806

Query: 385 LLV--EDSNLQAPTWSP 399
             +      + + ++SP
Sbjct: 807 KTISGHTGGVYSVSFSP 823



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 84/239 (35%), Gaps = 20/239 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + D        +       +    FSPN + +A  + D      + L + +
Sbjct: 960  SGSSDQTIRLWDVSEGRCFQILTGHTDWVRCLAFSPNGEILASGSADQ----TIRLWNPQ 1015

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +  + +      + +  FS +G R LIS   D+ +  +  D+++    ++ +     +
Sbjct: 1016 TGQCLQILSGHSDQVYSIAFSGDG-RILISGSTDKTVRFW--DVKTGNCLKVCHGHCDRV 1072

Query: 306  SAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             A  ++ ++  I   S       L +   +G   K +        F   +SP G  +A  
Sbjct: 1073 FAVDFNSNAEIIASGSI---DNTLKLWTVSGECLKTL-YGHSNWIFSVAFSPDGKFLASG 1128

Query: 365  KFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    I V   +  +    L      + +  +   G+ +I   +   D   +L+ +
Sbjct: 1129 SHD---HTIRVWDVETGECIHILQGHTHLVSSVRFCHEGKFIISGSQ---DQTVRLWDV 1181



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 47/305 (15%), Positives = 100/305 (32%), Gaps = 49/305 (16%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             RLW+VK  K +   +    P   R +A   S D                    E + S
Sbjct: 626 NIRLWEVKTGKLVAICQ--GHPNWVRSVA--FSPD-------------------GEMLAS 662

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     + + + +           +  +F   FS +  K+A  + D      V L DT  
Sbjct: 663 GGADRLVKLWNVETGACIKTYSGHEGEVFSVAFSSDGTKIASGSGD----CTVKLWDTHT 718

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINI 305
            +    +      + +  FS    R   S  +D+ M I+  D+++    ++ +       
Sbjct: 719 GQCLNTLSGHTDWVRSVAFSPTTDRVA-SGSQDQTMRIW--DVKTGDCLKICHEHQGWVR 775

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S +++ + S +   S       + + + +  +  +         +   +SP  +L+A   
Sbjct: 776 SVAFNGNGSLLASGSS---DHNINLWKGDTGEYLKTISGHTGGVYSVSFSPTENLLASGS 832

Query: 366 FSGEKFAIGVMKKDGSQER---------LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
                + + V   +    +         L    + +   ++ P G +L        D   
Sbjct: 833 AD---YTVRVWDCENENHQDQSPYSIKTLYGHTNQIFCVSFCPQGETLACVSL---DQTV 886

Query: 417 KLYSI 421
           KL+ +
Sbjct: 887 KLWDV 891



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 71/189 (37%), Gaps = 37/189 (19%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             +   G  R+ +        R WDVK    +             K+ H   D ++     
Sbjct: 1032 SIAFSGDGRILISGSTDKTVRFWDVKTGNCL-------------KVCHGHCDRVFAV--- 1075

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
               DFNS    ++    SG I N+L +    G  ++ L       +F   FSP+ + +A 
Sbjct: 1076 ---DFNSNAEIIA----SGSIDNTLKLWTVSGECLKTLY-GHSNWIFSVAFSPDGKFLAS 1127

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             ++D      + + D         +     ++ + RF   GK   IS  +D+ + ++  D
Sbjct: 1128 GSHDH----TIRVWDVETGECIHILQGHTHLVSSVRFCHEGKFI-ISGSQDQTVRLW--D 1180

Query: 289  LQSNATERL 297
            +++    +L
Sbjct: 1181 VETGECVKL 1189



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 79/243 (32%), Gaps = 19/243 (7%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       +    FSP    +A    D      + L + +  +         + + + 
Sbjct: 598 RSVFTETLGNILSAAFSPKG--LATCDTD----CNIRLWEVKTGKLVAICQGHPNWVRSV 651

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDR 322
            FS +G+    S   D  + ++  ++++ A  +  +       S ++S D ++I   S  
Sbjct: 652 AFSPDGEMLA-SGGADRLVKLW--NVETGACIKTYSGHEGEVFSVAFSSDGTKIASGS-- 706

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G   + +  ++                   +SP  D +A +    +   I  +K  G  
Sbjct: 707 -GDCTVKLWDTHTGQCLNTLSGHTDWVRSVAFSPTTDRVA-SGSQDQTMRIWDVKT-GDC 763

Query: 383 ERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            ++  E    +++  ++ +G  L        D    L+  D     +T+           
Sbjct: 764 LKICHEHQGWVRSVAFNGNGSLLA---SGSSDHNINLWKGDTGEYLKTISGHTGGVYSVS 820

Query: 442 WVG 444
           +  
Sbjct: 821 FSP 823


>gi|21221605|ref|NP_627384.1| protease [Streptomyces coelicolor A3(2)]
 gi|20140899|sp|Q9RKB9|TRI2_STRCO RecName: Full=Putative tricorn protease homolog 2
 gi|6138853|emb|CAB59664.1| putative protease [Streptomyces coelicolor A3(2)]
          Length = 1171

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 76/210 (36%), Gaps = 36/210 (17%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++L          R+   R+    PRFS +G+    +  +    +++ V +      +LT
Sbjct: 32  LWLASLDGPGRAWRLTVDRTKAGPPRFSPDGRHIAYTSWRTLVPEVHLVPVDGGPGRQLT 91

Query: 299 NTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +   ++     +SP         D +G   +  + S+G     ++            +P 
Sbjct: 92  HWGGLDTRVCGWSPP--------DPDGTTAVLAVASHGEPFSHLTW-------AYKVTPD 136

Query: 358 GD---LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           GD    + +    G    I     DG +  LL+  +    P          + R + G T
Sbjct: 137 GDPGRKLPW----GPVTDIQAADLDGERRTLLLTGTPPHEPA--------AWKRYRGGAT 184

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           G +L+   L+G    L +   + S P +VG
Sbjct: 185 G-RLW---LHGERL-LPDLGGHLSAPMFVG 209



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 92/276 (33%), Gaps = 43/276 (15%)

Query: 174 NSRILFVSESVVSGII-----KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             R+ ++    +SG       ++ L +   DG    +           PRFSP+ + +AY
Sbjct: 8   MGRVSYLRLPHLSGDQLCFVAEDDLWLASLDGPGRAWRLTVDRTKAGPPRFSPDGRHIAY 67

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FS---SNGKRALISVQKDEAM-- 282
            ++    +  V+L+        +++ ++  +      +S    +G  A+++V        
Sbjct: 68  TSWRT-LVPEVHLVPVD-GGPGRQLTHWGGLDTRVCGWSPPDPDGTTAVLAVASHGEPFS 125

Query: 283 ---DIYSVDLQSNATERLTNTLFINISASYSPDSSQI-------------VFESDREGKE 326
                Y V    +   +L      +I A+   D  +               ++  R G  
Sbjct: 126 HLTWAYKVTPDGDPGRKLPWGPVTDIQAA-DLDGERRTLLLTGTPPHEPAAWKRYRGGAT 184

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
               +  +G   +R+  D       P++   G  IAF         +    +DG+  R  
Sbjct: 185 G--RLWLHG---ERLLPDLGGHLSAPMFV--GGRIAFLSDHEGVGNLYSCAQDGTGLRRH 237

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +     A   +  G  +++           L+ +D
Sbjct: 238 TDHDAFYARNAASDGTRVVY------QCAGDLWIVD 267



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 9/117 (7%)

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDS 390
           + G     + +       D  +SP G  + ++     +    I + + DG +  L+V+ +
Sbjct: 496 TAGGQVTELIRSVNGPVRDLAFSPDGTWLTWSHPGIGRTLRQIKMARIDGPEGTLVVDVT 555

Query: 391 N----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
           N     + P ++  GR L F   +  D    +++ DL+   G    L+   +    P
Sbjct: 556 NGRFEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSP 612



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 5/85 (5%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM----DIYSVDLQSNATER-LT 298
           T   +  + I +    +    FS +G     S            +  +D         +T
Sbjct: 496 TAGGQVTELIRSVNGPVRDLAFSPDGTWLTWSHPGIGRTLRQIKMARIDGPEGTLVVDVT 555

Query: 299 NTLFINISASYSPDSSQIVFESDRE 323
           N  F + +  ++ D   + F S R 
Sbjct: 556 NGRFEDENPVFTRDGRYLAFLSWRG 580



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 78/236 (33%), Gaps = 25/236 (10%)

Query: 164 QSITGEKGDFNSRILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           + +  + G   S  +FV   +          +L    +DG  +R      D        S
Sbjct: 192 ERLLPDLGGHLSAPMFVGGRIAFLSDHEGVGNLYSCAQDGTGLRR-HTDHDAFYARNAAS 250

Query: 221 PNQQKVAYA---------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--G 269
            +  +V Y                  R   +     RA +R     +       S +  G
Sbjct: 251 -DGTRVVYQCAGDLWIVDDLAPGSAPRRLDVRLSGPRAGRRTHQVPAAQHVGGISVDETG 309

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQL 328
           + + + V+      +Y +  +      + +T  + +       +S +I + +D EG++ +
Sbjct: 310 RASAVVVRGS----LYWLTHRDGPARTIADTPGVRVRLPEMLGESGRIAYVTDAEGEDAV 365

Query: 329 YVM----QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +      + G   +R++  +     + V  P GD +A     G    + V + D 
Sbjct: 366 EISYLPRATGGRAARRLASGRLGRVLELVSDPAGDRLAVASHDGRLLILDVAEPDT 421



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 6/98 (6%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM---DTRIDRAPKRIGNF 256
           G  +  L  S +  + +  FSP+   + ++       LR   M   D         + N 
Sbjct: 498 GGQVTELIRSVNGPVRDLAFSPDGTWLTWSHPGIGRTLRQIKMARIDGPEGTLVVDVTNG 557

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           R     P F+ +G+       +         D+ +   
Sbjct: 558 RFEDENPVFTRDGRYLAFLSWRGFDP---VYDVHTGDL 592


>gi|330912550|ref|XP_003295982.1| hypothetical protein PTT_04320 [Pyrenophora teres f. teres 0-1]
 gi|311332220|gb|EFQ95919.1| hypothetical protein PTT_04320 [Pyrenophora teres f. teres 0-1]
          Length = 446

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 71/208 (34%), Gaps = 14/208 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                +     + +   +FSP+ + +A A+ D      + + D R       +    + I
Sbjct: 101 YAPTLILRGHKKAVSCIKFSPDGRYIASASAD----CTIKIWDARTGALEHTLEGHLAGI 156

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S +  + L S   D+++ ++  +                 S ++SP  + +V  S
Sbjct: 157 STISWSPD-SKILASGSDDKSIRLWDPNTGLAHPTPFIGHHNYVYSIAFSPKGNMLVSGS 215

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E +Y+     +   R             +   G LI      G    I V     
Sbjct: 216 Y---DEAVYLWDVRAARVMRSLPAHSDPVGGVDFVRDGTLIVSCSHDG---LIRVWDTAT 269

Query: 381 SQ-ERLLVEDSNLQAPT--WSPSGRSLI 405
            Q  R LV + N    +  +SP+G+ ++
Sbjct: 270 GQCLRTLVHEDNASVSSVIFSPNGKYVL 297



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 63/177 (35%), Gaps = 9/177 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D     + +        +    +SP+ + +A  + D    +R++  +T 
Sbjct: 128 SASADCTIKIWDARTGALEHTLEGHLAGISTISWSPDSKILASGSDD--KSIRLWDPNTG 185

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           +      IG+  + + +  FS  G   + S   DEA+ ++ V         L        
Sbjct: 186 LAHPTPFIGHH-NYVYSIAFSPKGNMLV-SGSYDEAVYLWDVRAA-RVMRSLPAHSDPVG 242

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLI 361
              +  D + IV  S       + V  +      R +  +  AS    ++SP G  +
Sbjct: 243 GVDFVRDGTLIVSCSH---DGLIRVWDTATGQCLRTLVHEDNASVSSVIFSPNGKYV 296



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 40/135 (29%), Gaps = 16/135 (11%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   I   S       + +  +     +   +   A      WSP   ++A      
Sbjct: 119 FSPDGRYIASAS---ADCTIKIWDARTGALEHTLEGHLAGISTISWSPDSKILASGSDDK 175

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               I +   +           +        +SP G  L+      G     +Y  D+  
Sbjct: 176 S---IRLWDPNTGLAHPTPFIGHHNYVYSIAFSPKGNMLV-----SGSYDEAVYLWDV-- 225

Query: 426 RNETLINTPAYASDP 440
           R   ++ +    SDP
Sbjct: 226 RAARVMRSLPAHSDP 240


>gi|228470496|ref|ZP_04055363.1| dipeptidyl peptidase IV [Porphyromonas uenonis 60-3]
 gi|228307792|gb|EEK16748.1| dipeptidyl peptidase IV [Porphyromonas uenonis 60-3]
          Length = 746

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 66/368 (17%), Positives = 131/368 (35%), Gaps = 71/368 (19%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             L DV ++K I+G  +F++  + ++ +    ++   ++  E+G   + +++  +   S 
Sbjct: 138 LYLIDV-EQKLIVG--YFATGDTEKRASLLSPNERNLAVKSEEG---TLLIYTLQPAGSK 191

Query: 188 IIKNSLCVMD------RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
               +L   D        G ++       D  LF   +SP+ +++A+   D   +    +
Sbjct: 192 PQAPTLVATDEAEAAVVYGESVHQNEFGIDGGLF---WSPDSRQLAFYRMDQSMVAPYPI 248

Query: 242 MDTRIDRAPKRIGNFRSMILAP--------------------------------RFSSNG 269
           +D    +A  +   +  M  +P                                 +  N 
Sbjct: 249 VDMTPHKAVVQPVRYP-MAGSPSHHVTLGVFHLENQQTTYLETGGDPEHYLTNVAWHPNS 307

Query: 270 KRALISVQKDEAMDIYS--VDLQSNATERLTNTLFINISASY-----------SPDSSQI 316
           ++  I+        ++    D+Q+ A    T TLF    A Y                Q 
Sbjct: 308 QKVYIAELNRGQDHLFLNGYDVQTGAR---TETLFEETDAHYVEPQRPMMFVPGSRGEQF 364

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIG 374
           V+ES REG  QLY+  S G   ++++  +        + P+G+ I F     S  +  I 
Sbjct: 365 VWESRREGYRQLYLYSSTGKLIRKLTDMEGEVTDIYGFDPKGERIYFQAAYPSPLERHIF 424

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +    +   L + +     T+SP  +     + +       +   D NG    LI+  
Sbjct: 425 ASELKRGRTIQLSKVAGTHEATFSPD-KQYYIDQLQSATIARSVMLHDCNGLQLRLIH-- 481

Query: 435 AYASDPQW 442
             A DP W
Sbjct: 482 -QAPDP-W 487


>gi|296817027|ref|XP_002848850.1| WD domain-containing protein [Arthroderma otae CBS 113480]
 gi|238839303|gb|EEQ28965.1| WD domain-containing protein [Arthroderma otae CBS 113480]
          Length = 720

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 57/173 (32%), Gaps = 12/173 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +        ++   FS +  K+A  + D      V + D+       R+      +    
Sbjct: 398 FELSHHTNEVWYLEFSHDGTKLATTSRD----CTVLIYDSTTFEIIHRLTEHSEPVAYAT 453

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +  +  I+  +D    +++V   +     + +      SAS++PD    V     +G
Sbjct: 454 WSPDDTKL-ITCSQDFKAKMWNVQTGTCILT-INHHHAPITSASWAPDGESFV-TGSLDG 510

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           + QL      G  +   +   +    D   +P G  +           I V  
Sbjct: 511 QSQLCHWSVRG--EPLYTWPGQYRVRDCAITPDGKRLIAISLQK---RIYVYN 558



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/190 (10%), Positives = 61/190 (32%), Gaps = 22/190 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     ++ + D     I +      + +    +SP+  K+   + D +      + + +
Sbjct: 421 TTSRDCTVLIYDSTTFEIIHRLTEHSEPVAYATWSPDDTKLITCSQDFK----AKMWNVQ 476

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  I +  + I +  ++ +G+   ++   D    +    ++           +   
Sbjct: 477 TGTCILTINHHHAPITSASWAPDGES-FVTGSLDGQSQLCHWSVRGEPLYTWP-GQYRVR 534

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS------YFDPVWSPQGD 359
             + +PD  +++  S    ++++YV          I+ ++E S            S    
Sbjct: 535 DCAITPDGKRLIAISL---QKRIYVYNF-------ITHEEEYSVLLKLDLTCLSISADSR 584

Query: 360 LIAFTKFSGE 369
            +       E
Sbjct: 585 FMLVNMSENE 594



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 47/132 (35%), Gaps = 13/132 (9%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +S D +++   S R+    +Y   +      R+++  E   +   WSP    +       
Sbjct: 412 FSHDGTKLATTS-RDCTVLIYD-STTFEIIHRLTEHSEPVAYA-TWSPDDTKLITCSQD- 467

Query: 369 EKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             F   +         L +   +  + + +W+P G S + +   DG +    +S+    R
Sbjct: 468 --FKAKMWNVQTGTCILTINHHHAPITSASWAPDGESFV-TGSLDGQSQLCHWSV----R 520

Query: 427 NETLINTPAYAS 438
            E L   P    
Sbjct: 521 GEPLYTWPGQYR 532


>gi|298249658|ref|ZP_06973462.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297547662|gb|EFH81529.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 706

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 71/196 (36%), Gaps = 16/196 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--VQ 277
           SP+   +  +             +T +   P        +     +S + +  + +    
Sbjct: 457 SPDGTHMLISDMAGYLSAWDVSTNTLLFSYPVFNAKGAPLTFLLAWSPDNRYFVGARGSS 516

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +   +  +V   S+  + + +   +     S ++SP+ + I       G++QLYV  + 
Sbjct: 517 LEGFQNEVTVYEASDHGKVVRSYSGVQRHITSLTWSPNGAYIAAI----GEDQLYVWDAQ 572

Query: 335 GSDQKRISQDKE---ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVED 389
            +    +S       AS     WSP    +A    SG    I  ++ DG  ++   +   
Sbjct: 573 KAGDPLMSTSGSSVLASGHLKAWSPDSTKLA-CYDSGGNIQIWSLQ-DGKLQQQGGMSTQ 630

Query: 390 SNLQAPTWSPSGRSLI 405
             ++   WSP G+ L+
Sbjct: 631 GRIEDLVWSPDGKYLV 646



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 58/346 (16%), Positives = 119/346 (34%), Gaps = 68/346 (19%)

Query: 80  NLISQDSFK--QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
               Q      Q+ ++ D+  RF  + S G    +   V  +  D L ++          
Sbjct: 389 RPQPQSVMPDMQQSSSKDTQVRFASFASSGKNAAI---VYNDSFDVLAID---------- 435

Query: 138 QIIGKKFFSSPASWRKIAHTIS---DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
                   ++P   +   +  S   D  +  I+   G  +      +  V +  +  S  
Sbjct: 436 --KASSTPTTPYQLQYAPYDFSLSPDGTHMLISDMAGYLS------AWDVSTNTLLFSYP 487

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V +  GA + +L            +SP+ +    A     +  +  +         K + 
Sbjct: 488 VFNAKGAPLTFLL----------AWSPDNRYFVGARGSSLEGFQNEVTVYEASDHGKVVR 537

Query: 255 NFRS---MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--- 308
           ++      I +  +S NG              +Y  D Q  A + L +T   ++ AS   
Sbjct: 538 SYSGVQRHITSLTWSPNGAYIA----AIGEDQLYVWDAQ-KAGDPLMSTSGSSVLASGHL 592

Query: 309 --YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA---- 362
             +SPDS+++    D  G  Q++ +  +G  Q++     +    D VWSP G  +     
Sbjct: 593 KAWSPDSTKLA-CYDSGGNIQIWSL-QDGKLQQQGGMSTQGRIEDLVWSPDGKYLVSANP 650

Query: 363 -----FTKFSG--------EKFAIGVMKKDGSQERLLVEDSNLQAP 395
                +    G         +F + +     SQE ++++ + + +P
Sbjct: 651 SLLTLWDAQRGAMLDQKAMGQFTVAIYWPKDSQEIIILDSAKVASP 696


>gi|156743150|ref|YP_001433279.1| WD-40 repeat-containing protein [Roseiflexus castenholzii DSM
           13941]
 gi|156234478|gb|ABU59261.1| WD-40 repeat protein [Roseiflexus castenholzii DSM 13941]
          Length = 1157

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 65/188 (34%), Gaps = 8/188 (4%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           + + +        RI +          S +G R   +     ++ ++ +   +     L 
Sbjct: 797 LQVWNLTNLSRSPRIASAPGSPTLLALSRDGARLATAGADPTSLRLWDLAGTTLTARELA 856

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQ 357
                N + + S D  ++    D +G   +Y + +  +  +R+S     +      +SP 
Sbjct: 857 GPGGTNTAMALSRDGRRLA-IGDNQGATFVYDLTNLSASPQRLSGLGGRSGIRSLTFSPD 915

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G L+A      +     +    G+  R     +     T+S  GR L +     G  G +
Sbjct: 916 GRLLATGNDDSQARLYNLASGSGTYTRERTRGALTSI-TFSSDGRWLAY-----GSAGGQ 969

Query: 418 LYSIDLNG 425
           +    L+G
Sbjct: 970 VRLWRLSG 977



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 50/298 (16%), Positives = 100/298 (33%), Gaps = 33/298 (11%)

Query: 158  ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG----ANIRYLTPSRDQI 213
            I+D + +      G     I     +  +    +   ++  DG     N+  L+ S  +I
Sbjct: 753  IADAVLRGSLARIGGVGLWIGSPVVAAATSDNGSVAALLTADGTLQVWNLTNLSRS-PRI 811

Query: 214  LFEP------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               P        S +  ++A A  D   +              + +        A   S 
Sbjct: 812  ASAPGSPTLLALSRDGARLATAGADPTSLR--LWDLAGTTLTARELAGPGGTNTAMALSR 869

Query: 268  NGKRALISVQKDEAMDIYSVDLQ--SNATERLTN--TLFINISASYSPDSSQIVFESDRE 323
            +G+R  I    D     +  DL   S + +RL+         S ++SPD   +    + +
Sbjct: 870  DGRRLAI---GDNQGATFVYDLTNLSASPQRLSGLGGRSGIRSLTFSPDGRLLA-TGNDD 925

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--- 380
             + +LY + S      R  +    +     +S  G  +A+    G    + + +  G   
Sbjct: 926  SQARLYNLASGSGTYTR--ERTRGALTSITFSSDGRWLAYGSAGG---QVRLWRLSGMQF 980

Query: 381  -SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             S   LL   + +     + SG +L+ +   DG T   L+ ++    N   +     +
Sbjct: 981  DSVYVLLGLTAQVTEVRIA-SGNALVIAGSADGTTC--LWDLEARNDNRARVVLRGQS 1035


>gi|149924409|ref|ZP_01912774.1| serine/threonine kinase PKN8 [Plesiocystis pacifica SIR-1]
 gi|149814716|gb|EDM74290.1| serine/threonine kinase PKN8 [Plesiocystis pacifica SIR-1]
          Length = 996

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 52/297 (17%), Positives = 100/297 (33%), Gaps = 36/297 (12%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            R L+V  +      +     +D DGAN IR + P R         S  +  + Y T   
Sbjct: 634 GRELYVLNTREGLGPQLESVALDDDGANRIRVVVPGRQLYAMRFDVS-TENDLTYHTRAS 692

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRS------------------MILAPRFSSNGKRALIS 275
                + + + R    P+  G  R                   +I +  F+  G+   + 
Sbjct: 693 HGGQLLRIREPRGREEPESRGEARGPIPPLDLDAAELLFDTEDVIFSTAFAPRGQAMAVV 752

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +      +  V L     E        +    +++PD+  + F      + +L+ ++  
Sbjct: 753 TEGGGGRLLRVVPLIEGGPE--GEYPLRDAGKVTFAPDARSLAFVGRIGEEPRLWTLELT 810

Query: 335 GSDQKR---ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            + + +   ++  +  S     W+  G+LI  T      +     + D  + RLL   ++
Sbjct: 811 STARPQVHELTSLESGSPSGLEWTSTGELIYQTSDHRNFWRYDPRRPD-QEPRLLAPGAS 869

Query: 392 LQAPTW----SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-WV 443
            +   +    +P GR L  S  +       L+  DL       I+   Y S P  W 
Sbjct: 870 SKGWMFYAEATPDGRHLAVSWNQ---LERGLWLFDLETGAARRID-ERYPSHPMGWS 922



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 98/315 (31%), Gaps = 37/315 (11%)

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
           +G +R+RV      V   +Q+   +F  S  +     HT +    Q +   +        
Sbjct: 658 DGANRIRV------VVPGRQLYAMRFDVSTEND-LTYHTRASHGGQLLRIREPRGR---- 706

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
              E    G  +  +  +D D A    L    + ++F   F+P  Q +A  T      L 
Sbjct: 707 --EEPESRGEARGPIPPLDLDAA---ELLFDTEDVIFSTAFAPRGQAMAVVTEGGGGRLL 761

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-- 296
             +         +        +    F+ + +      +  E   +++++L S A  +  
Sbjct: 762 RVVPLIEGGPEGEYPLRDAGKV---TFAPDARSLAFVGRIGEEPRLWTLELTSTARPQVH 818

Query: 297 -LTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQS--NGSDQKRISQD--KEASYF 350
            LT+          ++     I   SD       +         + + ++     +   F
Sbjct: 819 ELTSLESGSPSGLEWTSTGELIYQTSD---HRNFWRYDPRRPDQEPRLLAPGASSKGWMF 875

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               +P G  +A   ++  +  + +   +    R + E        WS  G  L      
Sbjct: 876 YAEATPDGRHLA-VSWNQLERGLWLFDLETGAARRIDERYPSHPMGWSSDGTRLYL---- 930

Query: 411 DGDTGSKLYSIDLNG 425
                 +L+ I   G
Sbjct: 931 --RVEDELWRIPAPG 943


>gi|307591651|ref|YP_003900450.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306986505|gb|ADN18384.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 1202

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 59/347 (17%), Positives = 115/347 (33%), Gaps = 40/347 (11%)

Query: 120  GKDRLRVEFRLWDVKD---RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD---- 172
                +  + +LWDV     +K I G +      ++      ++   + S     G     
Sbjct: 811  ASGDVEGKIKLWDVNSKKLQKTIQGHREQIHIVTFHPKLPILASSGFDSTFKFWGIPEAY 870

Query: 173  ------FNSRILFVS------ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
                    S  LF S        +V+G     +   + +           +  +F   F+
Sbjct: 871  LLKIWQGFSPTLFCSSWHPQGHQIVAGGGTQIINRWNIEQERPFMSLEGHEGWIFGISFN 930

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+ +  A A+ D      + + DT   +  K +    +      F    K  L S   D 
Sbjct: 931  PDGKGFASASTDS----TIKVWDTETGKCYKTLYGHDNWTWTVDFHPK-KPILASGSSDR 985

Query: 281  AMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSD 337
             + ++++   +    +LT         S  +SPD   +   S DR     + +  +    
Sbjct: 986  TIKLWNL---TQGKVQLTLKGHENAVSSVQFSPDGLFLASASFDRT----IKLWNAQTGQ 1038

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            Q    Q  +   +   +S  G ++A +  +  K  +  +KK   Q  L V    +     
Sbjct: 1039 QLNSLQGHDNWIYCVKFSRDGQILA-SSDTDGKIIVWSLKKAQIQHILTVPPFPILTIDI 1097

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            SP  ++L             L+ +    + E + N P Y S P++  
Sbjct: 1098 SPDAKTLA-----SCQGDLILWDLKTGKQKEKIENPPYYFSLPKFSP 1139



 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 80/238 (33%), Gaps = 19/238 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S    +++ V D +           D   +   F P +  +A  + D      + L +  
Sbjct: 938  SASTDSTIKVWDTETGKCYKTLYGHDNWTWTVDFHPKKPILASGSSDR----TIKLWNLT 993

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +    +    + + + +FS +G     S   D  + ++  + Q+   ++L +    + 
Sbjct: 994  QGKVQLTLKGHENAVSSVQFSPDGLFLA-SASFDRTIKLW--NAQTG--QQLNSLQGHDN 1048

Query: 306  S---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                  +S D   +   SD +GK  + V     +  + I             SP    +A
Sbjct: 1049 WIYCVKFSRDGQILA-SSDTDGK--IIVWSLKKAQIQHILTVPPFPILTIDISPDAKTLA 1105

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI-FSRKKDGDTGSKLY 419
              +       +  +K    +E++         P +SP G+ L   +    G    +L+
Sbjct: 1106 SCQ---GDLILWDLKTGKQKEKIENPPYYFSLPKFSPDGQLLSTCATTLQGQVSVQLW 1160



 Score = 37.7 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 18/111 (16%)

Query: 193  LCVMDRDG---------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            L   D DG         A I+++       +     SP+ + +A    D      + L D
Sbjct: 1062 LASSDTDGKIIVWSLKKAQIQHILTVPPFPILTIDISPDAKTLASCQGD------LILWD 1115

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRA---LISVQKDEAMDIYSVDLQS 291
             +  +  ++I N       P+FS +G+       ++Q   ++ ++ ++ ++
Sbjct: 1116 LKTGKQKEKIENPPYYFSLPKFSPDGQLLSTCATTLQGQVSVQLWHLETRT 1166


>gi|298246005|ref|ZP_06969811.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297553486|gb|EFH87351.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 720

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/260 (11%), Positives = 87/260 (33%), Gaps = 29/260 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S+ + S     ++ + +    ++ Y      Q +    +SP  + +A       +   V 
Sbjct: 470 SKYIASAGDDTTVQIWEPANGHLVYTYTVHSQPVNAVAWSPGGEYIA----SAGNDKLVL 525

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE----R 296
           +   +      R    +  + A  +S +GK    S  K++++  ++   +         R
Sbjct: 526 VWHAQEHSELYRYEEHKDQVYAVAWSPDGKYLA-SAGKEKSIRFWNPFAEQKKPRTFWQR 584

Query: 297 LTNTLFINISAS-------------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-- 341
           +++    ++  S             + P    +   S  +    ++ +    +   ++  
Sbjct: 585 VSSIFSADLEPSVLKVHNERVNALAWHPKEYLLASASS-DSYACIWDVSIAYTQHTKLLR 643

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           +    ++     W+P G  +A    + +   +  + K+            + A  WSP+G
Sbjct: 644 TAGGNSAKNAVTWAPDGKHLAIAS-NDKTVQVWNVAKERCTYTYQGHQGYVAAVAWSPNG 702

Query: 402 RSLIFSRKKDGDTGSKLYSI 421
             L        D   +++ +
Sbjct: 703 ERLA---SAGVDRSVQIWQV 719



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/286 (13%), Positives = 85/286 (29%), Gaps = 45/286 (15%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     ++ V D    +  +        +    +S + + +A       D   V + +  
Sbjct: 433 TASYDRTVIVWDAASGDRVWTYKGHSARVNTLAWSSDSKYIA----SAGDDTTVQIWEPA 488

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                         + A  +S  G+        ++ + +     + +   R         
Sbjct: 489 NGHLVYTYTVHSQPVNAVAWSPGGEYIA--SAGNDKLVLVWHAQEHSELYRYEEHKDQVY 546

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-------KRISQDKEASY--------- 349
           + ++SPD   +       GKE+     +  ++Q       +R+S    A           
Sbjct: 547 AVAWSPDGKYLA----SAGKEKSIRFWNPFAEQKKPRTFWQRVSSIFSADLEPSVLKVHN 602

Query: 350 ---FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNL--QAPTWSPSGR 402
                  W P+  L+A +  S     I  +    +Q   L      N    A TW+P G+
Sbjct: 603 ERVNALAWHPKEYLLA-SASSDSYACIWDVSIAYTQHTKLLRTAGGNSAKNAVTWAPDGK 661

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINT----PAYASDPQWVG 444
            L  +     D   +++++      E    T      Y +   W  
Sbjct: 662 HLAIASN---DKTVQVWNV----AKERCTYTYQGHQGYVAAVAWSP 700



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 56/184 (30%), Gaps = 11/184 (5%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            + +  +G  K           N  ++       +    +SP+ + +A A+YD      V
Sbjct: 385 ATTTGKTGKAKGPTQYQIVKQPNTLFICTGHTGRVAAVVWSPDGKWLATASYDR----TV 440

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D              + +    +SS+ K        D+           +     T 
Sbjct: 441 IVWDAASGDRVWTYKGHSARVNTLAWSSDSKYIA--SAGDDTTVQIWEPANGHLVYTYTV 498

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQG 358
                 + ++SP    I       G ++L ++       +     + +   +   WSP G
Sbjct: 499 HSQPVNAVAWSPGGEYIA----SAGNDKLVLVWHAQEHSELYRYEEHKDQVYAVAWSPDG 554

Query: 359 DLIA 362
             +A
Sbjct: 555 KYLA 558



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 30/108 (27%), Gaps = 16/108 (14%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSP 399
                     VWSP G  +A   +        V        R+       + +    WS 
Sbjct: 413 TGHTGRVAAVVWSPDGKWLATASYDRTVI---VWDAASGD-RVWTYKGHSARVNTLAWSS 468

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNG---RNETLINTPAYASDPQWVG 444
             + +        DT  +++    NG      T+ + P  A    W  
Sbjct: 469 DSKYIA---SAGDDTTVQIWE-PANGHLVYTYTVHSQPVNAV--AWSP 510


>gi|229055006|ref|ZP_04195438.1| Acylamino-acid-releasing enzyme [Bacillus cereus AH603]
 gi|228721278|gb|EEL72802.1| Acylamino-acid-releasing enzyme [Bacillus cereus AH603]
          Length = 655

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 48/310 (15%), Positives = 112/310 (36%), Gaps = 56/310 (18%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D I+   + +  D    I +++        KN + V   DG +   +T  ++ +    ++
Sbjct: 69  DSIHPLWSPDSRD----IAYLNSVGDGDNKKNQIFVKSIDGYSELQITDEKEGVSTF-KW 123

Query: 220 SPNQQKVAYATYDD-----EDILRVY--------------------LMDTRIDRAPKRIG 254
            P  +   Y          +    +Y                        + D+  + I 
Sbjct: 124 EPTGKGFYYVAQSKECGEIKKRKELYGDFQHTGKEHRNNCLYYIEIEKGIQNDKEEREIS 183

Query: 255 NFRSMILAPRF-------SSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +     F       S++GK+ +     S+      D+Y +D+++   +++     +
Sbjct: 184 GVYQLTDGKDFYIHNFDISNDGKKVVFMATPSLNDYMNGDLYILDIEAGELQKMNIDKLL 243

Query: 304 NISASYSPDSSQIVFE-SDREGKE--------QLYVMQSNGSDQKRISQDKEASYFDPVW 354
             S  +SP+ S+I +  S RE            L +   N  +  +   + +++     W
Sbjct: 244 GGSVCFSPEGSKICYSASIREKDYYRNHIQESTLEIYDMNTGEVIQPLINFDSTVMPLQW 303

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDG 412
           + +G  I         + IG++ +DG+ E +L +  D  +   + +  G  + +S+    
Sbjct: 304 TDKG--ILIRWQDKTNYRIGLLCEDGTVE-MLSDKVDGFIMDASITRDGNHISYSKAITN 360

Query: 413 DTGSKLYSID 422
           +T  ++Y  D
Sbjct: 361 ET-FEIYLDD 369



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/280 (11%), Positives = 80/280 (28%), Gaps = 55/280 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     +       + P +S + +   
Sbjct: 24  NISDDGKGVAFVKKTANWKDNTYRNHIWIYEKDKEQSYLLTTGDIDSIHPLWSPDSRDIA 83

Query: 274 ISVQKDEAM----DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------- 322
                 +       I+   +   +  ++T+      +  + P      + +         
Sbjct: 84  YLNSVGDGDNKKNQIFVKSIDGYSELQITDEKEGVSTFKWEPTGKGFYYVAQSKECGEIK 143

Query: 323 -----------EGKEQ----LYVMQSNGS-----------DQKRISQDKEASYFDPVWSP 356
                       GKE     LY ++                  +++  K+    +   S 
Sbjct: 144 KRKELYGDFQHTGKEHRNNCLYYIEIEKGIQNDKEEREISGVYQLTDGKDFYIHNFDISN 203

Query: 357 QGDLIAF----TKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS---- 407
            G  + F    +        + ++  +  + + + ++     +  +SP G  + +S    
Sbjct: 204 DGKKVVFMATPSLNDYMNGDLYILDIEAGELQKMNIDKLLGGSVCFSPEGSKICYSASIR 263

Query: 408 -----RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                R    ++  ++Y ++     + LIN  +     QW
Sbjct: 264 EKDYYRNHIQESTLEIYDMNTGEVIQPLINFDSTVMPLQW 303



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 43/116 (37%), Gaps = 12/116 (10%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            A+ S D   + F        D   +  +++ + +      ++   +     P+WSP   
Sbjct: 22  GANISDDGKGVAFVKKTANWKDNTYRNHIWIYEKDKEQSYLLTT-GDIDSIHPLWSPDSR 80

Query: 360 LIAFTKFSGEKFA----IGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G+       I V   DG S+ ++  E   +    W P+G+   +  + 
Sbjct: 81  DIAYLNSVGDGDNKKNQIFVKSIDGYSELQITDEKEGVSTFKWEPTGKGFYYVAQS 136



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 38/94 (40%), Gaps = 9/94 (9%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPS 400
           +      S  G  +AF K +        +  I + +KD  Q  LL   D +   P WSP 
Sbjct: 19  TLSGANISDDGKGVAFVKKTANWKDNTYRNHIWIYEKDKEQSYLLTTGDIDSIHPLWSPD 78

Query: 401 GRSLIF--SRKKDGDTGSKLYSIDLNGRNETLIN 432
            R + +  S     +  ++++   ++G +E  I 
Sbjct: 79  SRDIAYLNSVGDGDNKKNQIFVKSIDGYSELQIT 112


>gi|197106088|ref|YP_002131465.1| dipeptidyl peptidase IV [Phenylobacterium zucineum HLK1]
 gi|196479508|gb|ACG79036.1| dipeptidyl peptidase IV [Phenylobacterium zucineum HLK1]
          Length = 739

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 53/300 (17%), Positives = 88/300 (29%), Gaps = 88/300 (29%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPR-------------- 264
           SP+ + V Y     +D+    L    +    P+ + + + +    R              
Sbjct: 49  SPDGRSVTYIKVRADDLTVTDLWIADVAGGEPRMLIDGKRLAPEARELSEAEKARRERAG 108

Query: 265 ----------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                     + S G+  L  V+ D    +Y  DL S    RLT T    I A  SP  S
Sbjct: 109 VATRGVVDYEWDSQGRLILAPVEGD----LYIYDLGSGQVRRLTRTPGDEIDAKVSPKGS 164

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKE----------------ASYFDPVWSPQG 358
            + +  D    + LYV  + G  ++ ++Q                     +    WSP  
Sbjct: 165 FVSYVRD----DDLYVTPAAGGAERALTQGGTELKSWGTAEFIAQEEMDRHTGYWWSPDE 220

Query: 359 DLIAFTKFSGEKFAI------------------------------GVMKKDGSQERL--L 386
             IA          I                               V            L
Sbjct: 221 ARIAVAHVDQTGVDIVERPEVGATGAKVVAQRYPRVGRPNAVVTLYVQDVATGARTKVDL 280

Query: 387 VEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQWV 443
            +D ++      WS  GR+L   R+        L ++D   G+   +++     + P WV
Sbjct: 281 GDDPDIYLARVDWSKDGRTLYVQRQSRDQRRLDLIAVDPATGKGRVILS----ETSPHWV 336



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 86/236 (36%), Gaps = 55/236 (23%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP----- 217
            + +T   GD     +    S VS +  + L V    G   R LT    ++         
Sbjct: 144 VRRLTRTPGDEIDAKVSPKGSFVSYVRDDDLYVTPAAGGAERALTQGGTELKSWGTAEFI 203

Query: 218 -----------RFSPNQQKVAYATYDDEDILRV--------------------------- 239
                       +SP++ ++A A  D   +  V                           
Sbjct: 204 AQEEMDRHTGYWWSPDEARIAVAHVDQTGVDIVERPEVGATGAKVVAQRYPRVGRPNAVV 263

Query: 240 --YLMDTRIDRAPKR-IGNFRSMILA-PRFSSNGKRALISVQKDE--AMDIYSVDLQSNA 293
             Y+ D       K  +G+   + LA   +S +G+   +  Q  +   +D+ +VD  +  
Sbjct: 264 TLYVQDVATGARTKVDLGDDPDIYLARVDWSKDGRTLYVQRQSRDQRRLDLIAVDPATGK 323

Query: 294 TERL---TNTLFINISASYSP--DSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
              +   T+  +++I+  + P  D +  ++ S++ G   LY+ +++G   +++++ 
Sbjct: 324 GRVILSETSPHWVDITDDFKPLSDGT-FLWSSEKSGFRHLYLHRADGRLIRQVTKG 378


>gi|332668787|ref|YP_004451794.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Cellulomonas fimi ATCC 484]
 gi|332337824|gb|AEE44407.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Cellulomonas fimi ATCC 484]
          Length = 720

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 61/181 (33%), Gaps = 14/181 (7%)

Query: 262 APRFSSNGKRALI-----SVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQ 315
               S +G   +        + D+   + +VD+ +     L      +      SPD   
Sbjct: 251 GAAISPDGTTLVTGWTVPRARGDQRSVLVAVDVATGERRTLVEDEGADLWGPVVSPDGRW 310

Query: 316 IVFESDREGKE------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + F  +            L V+   G + + + +  +    DPVW P  D +        
Sbjct: 311 VAFGRETVSTPFEAPRLSLQVVPLAGGEPRTLGEGWDRWPHDPVWLPGSDGLLVLADDEG 370

Query: 370 KFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +  +  +     +  R+  +D+       SP GR+  ++ +   +  +    IDL    E
Sbjct: 371 RGPVFRVDLASGEVTRVTSDDAVFTDVQVSPDGRT-AYALRSSYEAPAHPVRIDLARATE 429

Query: 429 T 429
           T
Sbjct: 430 T 430



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 70/241 (29%), Gaps = 15/241 (6%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
             R         + +       D  + +   +     G  ++ L  +D      R L   
Sbjct: 235 ELRDATPDARSALVEQGAAISPDGTTLVTGWTVPRARGDQRSVLVAVDVATGERRTLVED 294

Query: 210 RDQILFEPRFSPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PR 264
               L+ P  SP+ + VA+     +   E       +       P+ +G         P 
Sbjct: 295 EGADLWGPVVSPDGRWVAFGRETVSTPFEAPRLSLQVVPLAGGEPRTLGEGWDRWPHDPV 354

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDRE 323
           +       L+    +    ++ VDL S    R+T+   +      SPD        S  E
Sbjct: 355 WLPGSDGLLVLADDEGRGPVFRVDLASGEVTRVTSDDAVFTDVQVSPDGRTAYALRSSYE 414

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                  +        R ++  E      + SP     A  KF G    +     DG + 
Sbjct: 415 APAHPVRIDLA-----RATETGEPVAATALVSPA----ATPKFPGRLTEVETTVADGRRV 465

Query: 384 R 384
           R
Sbjct: 466 R 466



 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 37/94 (39%), Gaps = 18/94 (19%)

Query: 265 FSSNGKRALISVQKDE------AMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIV 317
            S +G R + +V   +         ++ VD +      RLT +     SA+++     ++
Sbjct: 50  LSPDGTRLVTAVSTLDPKRTRYVTALWEVDPEGRKPARRLTRSAKGEASAAFTAAGD-VL 108

Query: 318 FESDREGK----------EQLYVMQSNGSDQKRI 341
           F S R               L+++ ++G + + +
Sbjct: 109 FTSARPDPDAKDADDEPVPALWLLPADGPEARVV 142


>gi|325914198|ref|ZP_08176550.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325539582|gb|EGD11226.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 657

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 67/232 (28%), Gaps = 46/232 (19%)

Query: 259 MILAPRFSSNGKRALISVQKDEAM------DIYSVDLQS--NATERLTNTLFINISASYS 310
            +  P+ S +G+R   +V   +A        I+ + ++    A    +     +    ++
Sbjct: 37  SVGDPQISPDGRRIAYTVATPQAQGKPPLSKIWQIPVRGIAAAVSMPSTDAANDQHPRWT 96

Query: 311 PDSSQIVFESDR------EGKEQL---YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            D  +++F S R       G EQL    V Q     + ++             S     I
Sbjct: 97  ADGRRMLFLSTRPLPGDVTGGEQLASTQVWQQTPDARPQLLTRSAGDISAFSLSADARQI 156

Query: 362 AF----------------------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWS 398
           A+                       +       + V      Q R+L           WS
Sbjct: 157 AYLALDPPTAQAAADTDAKRDAVQIERPTRFSRVWVRDLRSGQTRVLTPPGLQVHDLAWS 216

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDL------NGRNETLINTPAYASDPQWVG 444
           P GR L              Y+  +      +G   T++   A A   QW  
Sbjct: 217 PDGRQLALRVSDGTTLNDYWYASRVQLLRLRDGTLGTVLEPHASALPLQWSP 268



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 81/267 (30%), Gaps = 59/267 (22%)

Query: 216 EPRFSPNQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNG 269
           +P+ SP+ +++AY               +    +      +       +    PR++++G
Sbjct: 40  DPQISPDGRRIAYTVATPQAQGKPPLSKIWQIPVRGIAAAVSMPSTDAANDQHPRWTADG 99

Query: 270 KRALISVQKDEAMDIYSVDLQSNA---------------TERLTNTLFINISASYSPDSS 314
           +R L    +         D+                    + LT +     + S S D+ 
Sbjct: 100 RRMLFLSTRPLPG-----DVTGGEQLASTQVWQQTPDARPQLLTRSAGDISAFSLSADAR 154

Query: 315 QIVFES----------------------DREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           QI + +                            +++V        + ++        D 
Sbjct: 155 QIAYLALDPPTAQAAADTDAKRDAVQIERPTRFSRVWVRDLRSGQTRVLTPPGLQ-VHDL 213

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMK--------KDGSQERLLVEDSNLQAPTWSPSGRSL 404
            WSP G  +A     G                 +DG+   +L   ++     WSP GR L
Sbjct: 214 AWSPDGRQLALRVSDGTTLNDYWYASRVQLLRLRDGTLGTVLEPHASALPLQWSPDGRRL 273

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLI 431
           ++ +  +    + L    L  RN+  +
Sbjct: 274 LYGQLGEHGMVANLIVHQL--RNQRRV 298



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 85/299 (28%), Gaps = 48/299 (16%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFSPNQQKVAYATYDD---- 233
             +         + +  +   G       PS D      PR++ + +++ + +       
Sbjct: 54  VATPQAQGKPPLSKIWQIPVRGIAAAVSMPSTDAANDQHPRWTADGRRMLFLSTRPLPGD 113

Query: 234 ----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--------------- 274
               E +    +     D  P+ +      I A   S++ ++                  
Sbjct: 114 VTGGEQLASTQVWQQTPDARPQLLTRSAGDISAFSLSADARQIAYLALDPPTAQAAADTD 173

Query: 275 -------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKE 326
                    +      ++  DL+S  T  LT         ++SPD  Q+    SD     
Sbjct: 174 AKRDAVQIERPTRFSRVWVRDLRSGQTRVLTPPGLQVHDLAWSPDGRQLALRVSDGTTLN 233

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPV-------WSPQGDLIAFTKF--SGEKFAIGVMK 377
             +          R+      +  +P        WSP G  + + +    G    + V +
Sbjct: 234 DYWYASRV--QLLRLRDGTLGTVLEPHASALPLQWSPDGRRLLYGQLGEHGMVANLIVHQ 291

Query: 378 KDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               +  +L +D    L    W      +       G  G+ L  ID +      +  P
Sbjct: 292 LRNQRRVVLAQDWPGTLWLARWQNDSSLI--GEGLQGVRGAFL-RIDADSGRWKPLARP 347



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 99/307 (32%), Gaps = 44/307 (14%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++R L    +    +    +     D A  + LT S   I      S + +++AY   D 
Sbjct: 106 STRPLPGDVTGGEQLASTQVWQQTPD-ARPQLLTRSAGDISAF-SLSADARQIAYLALDP 163

Query: 234 E---------------------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
                                    RV++ D R  +  + +      +    +S +G++ 
Sbjct: 164 PTAQAAADTDAKRDAVQIERPTRFSRVWVRDLRSGQ-TRVLTPPGLQVHDLAWSPDGRQL 222

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-------YSPDSSQIVFESDREGK 325
            + V     ++ Y    +         TL   +          +SPD  ++++    E  
Sbjct: 223 ALRVSDGTTLNDYWYASRVQLLRLRDGTLGTVLEPHASALPLQWSPDGRRLLYGQLGEHG 282

Query: 326 EQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               ++     +Q+R  ++QD   + +   W     LI      G + A   +  D  + 
Sbjct: 283 MVANLIVHQLRNQRRVVLAQDWPGTLWLARWQNDSSLIG-EGLQGVRGAFLRIDADSGRW 341

Query: 384 RLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-------A 435
           + L       QA T + +G  + +   +  D  ++++++      +     P        
Sbjct: 342 KPLARPQLPYQAFTVARNGD-IAYLGLRT-DQPAEVWTLRAGQLAQRSSTNPQVATWTHG 399

Query: 436 YASDPQW 442
              +  W
Sbjct: 400 QLREMSW 406


>gi|169625214|ref|XP_001806011.1| hypothetical protein SNOG_15874 [Phaeosphaeria nodorum SN15]
 gi|111055592|gb|EAT76712.1| hypothetical protein SNOG_15874 [Phaeosphaeria nodorum SN15]
          Length = 438

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 70/208 (33%), Gaps = 14/208 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                +     + +   RFSP+ + +A  + D      + L ++        +    + I
Sbjct: 101 YKPTLILRGHKKPISIIRFSPDGRYIASGSSD----CTIKLWNSTTGTLEHSLEGHLAGI 156

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            A  +S +  R L S   D+++ ++           L        S  +SP  + +V  S
Sbjct: 157 SALTWSPD-SRILASGSDDKSIRLWDTQKGLAHPTPLLGHHNYVYSLCFSPKGNMLVSGS 215

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E +++     +   R             +   G LI      G    I V     
Sbjct: 216 Y---DEAVFLWDVRAARVMRSLPAHSDPVSSVDFVRDGTLIVSCSHDG---LIRVWDTAT 269

Query: 381 SQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
            Q  R +V + N  +    +SP+G+ ++
Sbjct: 270 GQCLRTIVHEDNAPVTCVRFSPNGKYIL 297



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 60/178 (33%), Gaps = 11/178 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + +     + +        +    +SP+ + +A  + D      + L DT+
Sbjct: 128 SGSSDCTIKLWNSTTGTLEHSLEGHLAGISALTWSPDSRILASGSDDK----SIRLWDTQ 183

Query: 246 ID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                P  +    + + +  FS  G   + S   DEA+ ++ V         L       
Sbjct: 184 KGLAHPTPLLGHHNYVYSLCFSPKGNMLV-SGSYDEAVFLWDVRAA-RVMRSLPAHSDPV 241

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLI 361
            S  +  D + IV  S       + V  +      R I  +  A      +SP G  I
Sbjct: 242 SSVDFVRDGTLIVSCSH---DGLIRVWDTATGQCLRTIVHEDNAPVTCVRFSPNGKYI 296


>gi|313902329|ref|ZP_07835733.1| WD40-like beta Propeller containing protein [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467377|gb|EFR62887.1| WD40-like beta Propeller containing protein [Thermaerobacter
           subterraneus DSM 13965]
          Length = 873

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 49/143 (34%), Gaps = 44/143 (30%)

Query: 263 PRFSSNGKRALISVQKDEAM------DIYSVDLQS-NATERLTNTLFINISASYSPDSSQ 315
           PR +  G R +   +  +A       ++Y+           LT     + +  +SPD   
Sbjct: 49  PRLAPGGDRVVWVERWIDADRNQYRSNLYAAPASGDGVPAPLTTGPGSDRAPRWSPDGRW 108

Query: 316 IVFESD--------------------------------REG----KEQLYVMQSNGSDQK 339
           + F SD                                R G    + QLYV+ S G + +
Sbjct: 109 LAFLSDRPLPPDARPRRRDEPAASGGGAGAATPAARPGRGGEDKPRPQLYVLPSGGGEAR 168

Query: 340 RISQDKEASYFDPVWSPQGDLIA 362
            ++  K+ S    VWSP G  +A
Sbjct: 169 LLTLFKQGS-GPAVWSPDGRYVA 190



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 65/210 (30%), Gaps = 41/210 (19%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINI 305
           R+      + A  +  +G+  ++         +    D+Y V L +   E          
Sbjct: 308 RVTAGEYDVRAVAWMPSGRELVVVTNPHPDADRQPWTDVYVVSLPATGPEGEAGGGSRAG 367

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A                            +  ++++   +   ++ + SP G  IA   
Sbjct: 368 AA-----------AGAATRLPLDLSRDPLPAGVRKLTS-SDIDVYEALPSPDGRWIAVRG 415

Query: 366 FSGEKF------AIGVMKKDGSQERLLVEDSNLQAP---------------TWSPSGRSL 404
               ++       + ++  DGSQ R L  +++L                   W+P G  L
Sbjct: 416 QDARRYRAYSNTHLYLIAADGSQRRCLTAEADLTVGDESVNDVVGEAGATLAWAPDGSGL 475

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                + G+   +LY   ++G    L   P
Sbjct: 476 YALVSRRGEV--QLYWFGVDGTIRPLTGGP 503



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 36/141 (25%), Gaps = 28/141 (19%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---------EDI 236
               +++L      G  +     +       PR+SP+ + +A+ +             D 
Sbjct: 69  RNQYRSNLYAAPASGDGVPAPLTTGPGSDRAPRWSPDGRWLAFLSDRPLPPDARPRRRDE 128

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
                          R G  R     PR                   +Y +         
Sbjct: 129 PAASGGGAGAATPAARPG--RGGEDKPR-----------------PQLYVLPSGGGEARL 169

Query: 297 LTNTLFINISASYSPDSSQIV 317
           LT     +  A +SPD   + 
Sbjct: 170 LTLFKQGSGPAVWSPDGRYVA 190



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/149 (12%), Positives = 44/149 (29%), Gaps = 23/149 (15%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALIS------VQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +++ +    +     S +G+   +        +      +Y +    +    LT    + 
Sbjct: 390 RKLTSSDIDVYEALPSPDGRWIAVRGQDARRYRAYSNTHLYLIAADGSQRRCLTAEADLT 449

Query: 305 IS--------------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +                +++PD S +     R G+ QLY    +G+   R          
Sbjct: 450 VGDESVNDVVGEAGATLAWAPDGSGLYALVSRRGEVQLYWFGVDGT--IRPLTGGPQVLR 507

Query: 351 DPVWSPQGDLIAFTKFSGEK-FAIGVMKK 378
                 +G   A+ + +      I V   
Sbjct: 508 GISLDREGRRCAYLRLTATDPGEIWVADL 536



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 73/227 (32%), Gaps = 31/227 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKRALIS 275
            + P+ +++   T    D  R    D  +   P     G       A   +    R  + 
Sbjct: 320 AWMPSGRELVVVTNPHPDADRQPWTDVYVVSLPATGPEGEAGGGSRAGAAAGAATRLPLD 379

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ------LY 329
           + +D                +LT++      A  SPD   I        + +      LY
Sbjct: 380 LSRDPLPA---------GVRKLTSSDIDVYEALPSPDGRWIAVRGQDARRYRAYSNTHLY 430

Query: 330 VMQSNGSDQKRISQDKEASYFDP-------------VWSPQGDLIAFTKFSGEKFAIGVM 376
           ++ ++GS ++ ++ + + +  D               W+P G  +        +  +   
Sbjct: 431 LIAADGSQRRCLTAEADLTVGDESVNDVVGEAGATLAWAPDGSGLYALVSRRGEVQLYWF 490

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             DG+   L      L+  +    GR   + R    D G +++  DL
Sbjct: 491 GVDGTIRPLTGGPQVLRGISLDREGRRCAYLRLTATDPG-EIWVADL 536


>gi|20089401|ref|NP_615476.1| surface antigen gene [Methanosarcina acetivorans C2A]
 gi|19914298|gb|AAM03956.1| surface antigen gene [Methanosarcina acetivorans C2A]
          Length = 461

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 41/301 (13%), Positives = 98/301 (32%), Gaps = 27/301 (8%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF--- 215
           S+ +++ +   K    + +  +    V+G    +  V + D  NI  +  + +++     
Sbjct: 35  SNKVHKQLKIMKVSGITSLAILILMGVAGATPFA-YVTNSDSNNISVIDTATNRVTATVG 93

Query: 216 ---EPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               P     SP+ +KV      D+ +  +            ++G +   I     S +G
Sbjct: 94  VGEHPAGVTVSPDGKKVYVVNSYDDTVSIINTTTKNKVITTVKVGTYPQEI---AVSPDG 150

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +A ++   +  +    +D  +N            +  + SPD  + V+ ++  G    +
Sbjct: 151 TKAYVTSFSNNIVS--VIDTTTNKVTATVKVGNFPLGIAVSPDGKK-VYVANSGGDSTNF 207

Query: 330 VMQSN----GSDQKRISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGS 381
               +     ++    +     +      SP G   A+      +     AI V+    +
Sbjct: 208 TGTVSVIDTTTNTVAATIPTGNNSLRVAVSPDGTK-AYVMNSNIYRDSTAAIYVIDISTN 266

Query: 382 QERLLVEDSNL-QAPTWSPSGRSLIFSRKK-DGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +   +V   ++      SP G+ +  S +         +  ID          +   A  
Sbjct: 267 EVTDVVNIGDIPCGVAVSPDGKKVYVSIQYLSNSLTGAVNIIDTATNKVKATVSVGKAPS 326

Query: 440 P 440
            
Sbjct: 327 G 327



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/290 (17%), Positives = 107/290 (36%), Gaps = 34/290 (11%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + + ++V  S       +++ +++    N    T        E   SP+  K AY T   
Sbjct: 106 DGKKVYVVNS-----YDDTVSIINTTTKNKVITTVKVGTYPQEIAVSPDGTK-AYVTSFS 159

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD----IYSVDL 289
            +I+ V    T    A  ++GNF    L    S +GK+  ++    ++ +    +  +D 
Sbjct: 160 NNIVSVIDTTTNKVTATVKVGNFP---LGIAVSPDGKKVYVANSGGDSTNFTGTVSVIDT 216

Query: 290 QSNATERLTNTLFINISASYSPDSSQI-VFESD--REGKEQLYVMQSNGSDQKRISQDKE 346
            +N       T   ++  + SPD ++  V  S+  R+    +YV+  + ++   +    +
Sbjct: 217 TTNTVAATIPTGNNSLRVAVSPDGTKAYVMNSNIYRDSTAAIYVIDISTNEVTDVVNIGD 276

Query: 347 ASYFDPVWSPQGDLIAFTKF---SGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPS 400
                   SP G  +  +     +    A+ ++    ++ +  V     +AP+    +P 
Sbjct: 277 IPCGV-AVSPDGKKVYVSIQYLSNSLTGAVNIIDTATNKVKATVSVG--KAPSGIIVTPD 333

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG---FMD 447
           G  + +       T S +     +     + +T      P  V    FMD
Sbjct: 334 GTKV-YVVNCASHTVSVI-----DTATSRVTDTVKVGIYPARVAIGHFMD 377


>gi|134100720|ref|YP_001106381.1| amidohydrolase [Saccharopolyspora erythraea NRRL 2338]
 gi|133913343|emb|CAM03456.1| amidohydrolase [Saccharopolyspora erythraea NRRL 2338]
          Length = 614

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 55/148 (37%), Gaps = 22/148 (14%)

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-------REGKEQLYV 330
           +D+    + + L +     + + +      ++SPD + I F +        REG  Q+  
Sbjct: 11  QDQDGATHVLTLATGEVREVVDAVRAPGRPTWSPDGATIAFAAQRPVSRRFREGANQILT 70

Query: 331 MQSNGS-----DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--- 382
           ++ +       +              PVWSP G   AF        A+ V+  D S    
Sbjct: 71  VRVDTGAIAYHEVLPNRSLSGRGVDGPVWSPDGSSYAFVM----GAALWVVSVDASGTPT 126

Query: 383 --ERLLVEDSNLQAPTWSPSGRSLIFSR 408
              R +  +    AP+W P  R+L++  
Sbjct: 127 AAPRQVTAEVAD-APSWHPDSRTLLYLS 153



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 57/156 (36%), Gaps = 28/156 (17%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRD--------QILFEPRFSPNQQKVAYATYDD------ 233
             +++L   D+DGA       + +        +    P +SP+   +A+A          
Sbjct: 3   SGRDTLAFQDQDGATHVLTLATGEVREVVDAVRAPGRPTWSPDGATIAFAAQRPVSRRFR 62

Query: 234 EDILRVYLMDTRIDRA------PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           E   ++  +             P R  + R +   P +S +G      +    A+ + SV
Sbjct: 63  EGANQILTVRVDTGAIAYHEVLPNRSLSGRGVD-GPVWSPDGSSYAFVM--GAALWVVSV 119

Query: 288 DLQSN---ATERLTNTLFINISASYSPDSSQIVFES 320
           D       A  ++T  +    + S+ PDS  +++ S
Sbjct: 120 DASGTPTAAPRQVTAEVA--DAPSWHPDSRTLLYLS 153



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 32/154 (20%)

Query: 263 PRFSSNGKRALISVQ-------KDEAMDIYSVDLQSNAT---ERLTN----TLFINISAS 308
           P +S +G     + Q       ++ A  I +V + + A    E L N       ++    
Sbjct: 40  PTWSPDGATIAFAAQRPVSRRFREGANQILTVRVDTGAIAYHEVLPNRSLSGRGVD-GPV 98

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD S   F         +  + ++G+      Q        P W P    + +     
Sbjct: 99  WSPDGSSYAFV--MGAALWVVSVDASGTPTAAPRQVTAEVADAPSWHPDSRTLLYLSLG- 155

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP---TWSP 399
              A+ ++           E ++   P   TWSP
Sbjct: 156 ---ALRMVDS--------HEGTSCPVPLNLTWSP 178


>gi|126178589|ref|YP_001046554.1| PKD domain-containing protein [Methanoculleus marisnigri JR1]
 gi|125861383|gb|ABN56572.1| PKD domain containing protein [Methanoculleus marisnigri JR1]
          Length = 769

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 77/224 (34%), Gaps = 19/224 (8%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   V +   D  +   +Y   +    A +++    +    P  S  G   +    ++ +
Sbjct: 49  DGNMVVW--EDGRNGKSIY-YSSGPGSAGRKVAGEGTGQRYPSVS--GDYIVWEENRNMS 103

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DIY  ++    T  LT                 +V+   R G   + + +     +  +
Sbjct: 104 PDIYFFEISGGVTTALTEDPADQRMPVV--HGEHVVWYDARGGSTDICLYEIGTGSETFL 161

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPS 400
           S     + + P  S     + + + +G    I +       ++ + +D+  Q  P+ S  
Sbjct: 162 S-CSPVTEWKPALS--ERYVVWEENTGNG-DIWLYDIWNGDKQPITQDNRRQTYPSIS-- 215

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDPQ 441
           G  +++   ++G     +Y  DL+      + + + P     P 
Sbjct: 216 GSRIVWEDYRNG--APDIYLFDLDNPAAGEQRITDDPREQVSPA 257



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 68/163 (41%), Gaps = 17/163 (10%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S   +R ++  +     DI+  D+ +   + +T         S S   S+IV+E  R
Sbjct: 171 PALS---ERYVVWEENTGNGDIWLYDIWNGDKQPITQDNRRQTYPSIS--GSRIVWEDYR 225

Query: 323 EGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-D 379
            G   +Y+   +   + ++RI+ D        +    GDLIA+       + + +     
Sbjct: 226 NGAPDIYLFDLDNPAAGEQRITDDPREQVSPAI---DGDLIAWEDRRDGTWNVYICDLAA 282

Query: 380 GSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYS 420
           G  +++ V  S  +   P  S  G  +++  +   D+GS +Y+
Sbjct: 283 GKDKQMPVAPSATEQLYPAVS--GDRVVW--QNGRDSGSDIYA 321



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 55/175 (31%), Gaps = 11/175 (6%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQ 224
           +T  K   + R +   E+  +G       +   D  N  +      ++    P  S    
Sbjct: 166 VTEWKPALSERYVVWEENTGNGD------IWLYDIWNGDKQPITQDNRRQTYPSIS--GS 217

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++ +  Y +                 +RI +     ++P    +G       ++D   ++
Sbjct: 218 RIVWEDYRNGAPDIYLFDLDNPAAGEQRITDDPREQVSPAI--DGDLIAWEDRRDGTWNV 275

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           Y  DL +   +++            +    ++V+++ R+    +Y          
Sbjct: 276 YICDLAAGKDKQMPVAPSATEQLYPAVSGDRVVWQNGRDSGSDIYAFTYFSGAVP 330


>gi|261879825|ref|ZP_06006252.1| prolyl oligopeptidase [Prevotella bergensis DSM 17361]
 gi|270333483|gb|EFA44269.1| prolyl oligopeptidase [Prevotella bergensis DSM 17361]
          Length = 726

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 94/305 (30%), Gaps = 84/305 (27%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------YATYDDEDI------ 236
            +  L  M+ DG     LT S+  I    +FSP+ + V       Y     ++       
Sbjct: 121 REGQLWKMNPDGTGREKLTNSKTDIEGF-KFSPDGRHVILVKSLPYYGTIQKNPDDLPKA 179

Query: 237 ---------LRVYLMDTRIDRAPKRIGNFRSMI---------------LAP-------RF 265
                     R +         P       + +               +AP        +
Sbjct: 180 SGRLVTDLNYRHWDHYVESIAHPFLAEVNGNSVSEGIDIMEGEPYECPMAPFGGIEQIDW 239

Query: 266 SSNGKRALISVQK--------DEAMDIYSVDLQSNATERL-------------TNTL--- 301
           S + K+   + +K            DIY  +++++ T  L             T ++   
Sbjct: 240 SKDSKQVAYTSRKKTGVDYAISTDADIYLYNIETSETRNLCKPADYQEPRIDPTKSMRNQ 299

Query: 302 -----------FINISASYSPDSSQIVFESD-REG----KEQLYVMQSNGSDQKRISQDK 345
                        +I+  +S D   I ++S  R G    + +L +      ++K +++  
Sbjct: 300 AVNRQAGDMNVGYDINPKFSADGQYIAWQSMARNGYESDRNRLCIYNLKTGEKKYVTESF 359

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +++  D  W+P    + F         +      G   +L     +  +     +G+ L+
Sbjct: 360 DSNVDDFCWAPDSKTLYFLGVWHGTEMVYQTDLSGCVMQLTDGWYDYGSLQMMGNGKQLL 419

Query: 406 FSRKK 410
            +R  
Sbjct: 420 VTRHS 424



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 82/247 (33%), Gaps = 39/247 (15%)

Query: 220 SPNQQKVAYATY-----DDEDILRVYLMDTRIDRA---PKRIGNFRSMILAPRFSSNGKR 271
           SP+ ++V Y        +++    +++  T++ +    P  +           +  NG++
Sbjct: 57  SPDGKQVVYHVSYYSVKENKSHTMLFVQPTKVGKKIATPTLLTVDAKSETDAAWIENGQK 116

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLY 329
                +      ++ ++      E+LTN+        +SPD   ++        G  Q  
Sbjct: 117 IAFLREG----QLWKMNPDGTGREKLTNSKTDIEGFKFSPDGRHVILVKSLPYYGTIQKN 172

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---------G 380
                 +  + ++      +   V S     +A    +     I +M+ +         G
Sbjct: 173 PDDLPKASGRLVTDLNYRHWDHYVESIAHPFLAEVNGNSVSEGIDIMEGEPYECPMAPFG 232

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD------TGSKLYSIDLNGRNETLINTP 434
             E++           WS   + + ++ +K         T + +Y  ++       +  P
Sbjct: 233 GIEQI----------DWSKDSKQVAYTSRKKTGVDYAISTDADIYLYNIETSETRNLCKP 282

Query: 435 AYASDPQ 441
           A   +P+
Sbjct: 283 ADYQEPR 289


>gi|256396029|ref|YP_003117593.1| XRE family transcriptional regulator [Catenulispora acidiphila DSM
           44928]
 gi|256362255|gb|ACU75752.1| transcriptional regulator, XRE family [Catenulispora acidiphila DSM
           44928]
          Length = 1334

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 85/232 (36%), Gaps = 32/232 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +  A  D    L      +R +     + +F     A  FS NG+    +  
Sbjct: 783 AFSPDGRLLVAAGSDGSVRLWNMADPSRPEAIGPPLVSFGKSAQAVAFSPNGRVLA-AGS 841

Query: 278 KDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +D  + ++ V   ++ TE    LT+T  +  S ++ PD   +   S  +G  QL+ +   
Sbjct: 842 RDGTVRLWQVTGPTSPTELGGPLTDTAHVVYSLAFGPDGQTLAVGSS-DGVVQLWNLN-- 898

Query: 335 GSDQKRISQDKEASYFDPVW------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             D  R +   +       W      SP G  +A    +     + +        +L+ +
Sbjct: 899 --DPTRPTTSGQPLTGPGSWVNSLVFSPDGTRLA---AADSDDQVWLWDA--GTRQLVTK 951

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             +  A T      S+ + R       S L + D++G    L   P    +P
Sbjct: 952 LPHPAAVT------SVFYLRD-----NSTLATGDIDG-IARLWRLPGPTIEP 991



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 89/246 (36%), Gaps = 22/246 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT--RIDRAPKRIGNFRSMILAP 263
           L       +F   FSP+ + +A      + ++RV+      R    P  +    + + + 
Sbjct: 725 LPTGHTYTMFSLAFSPDGRTLA--VGGAQGVIRVWNTTDPARPVALPPPLTGTTATVYSL 782

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSN----ATERLTNTLFINISASYSPDSSQIVFE 319
            FS +G R L++   D ++ ++++   S         ++        A +SP+   +   
Sbjct: 783 AFSPDG-RLLVAAGSDGSVRLWNMADPSRPEAIGPPLVSFGKSAQAVA-FSPNGRVLAAG 840

Query: 320 SDREGKEQLYVM--QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           S R+G  +L+ +   ++ ++      D     +   + P G  +A     G      +  
Sbjct: 841 S-RDGTVRLWQVTGPTSPTELGGPLTDTAHVVYSLAFGPDGQTLAVGSSDGVVQLWNLND 899

Query: 378 KD--GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINT 433
                +  + L    +   +  +SP G  L        D+  +++  D   R   T +  
Sbjct: 900 PTRPTTSGQPLTGPGSWVNSLVFSPDGTRLA-----AADSDDQVWLWDAGTRQLVTKLPH 954

Query: 434 PAYASD 439
           PA  + 
Sbjct: 955 PAAVTS 960



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 78/258 (30%), Gaps = 28/258 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRY----LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +G    ++ +    G                +++   F P+ Q +A  + D    L    
Sbjct: 839  AGSRDGTVRLWQVTGPTSPTELGGPLTDTAHVVYSLAFGPDGQTLAVGSSDGVVQLWNLN 898

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
              TR   + + +    S + +  FS +G R   +   D    ++  D  +          
Sbjct: 899  DPTRPTTSGQPLTGPGSWVNSLVFSPDGTRLAAADSDD---QVWLWDAGTRQLVTKLPHP 955

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                S  Y  D+S +    D +G  +L+ +     +          + +  V  P   L 
Sbjct: 956  AAVTSVFYLRDNSTLA-TGDIDGIARLWRLPGPTIEPI------PGTIYSTVMGPHHTLA 1008

Query: 362  AFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTW------SPSGRSLIFSRKKDGDT 414
              +  +   + +   +        +           +      SP G ++        D 
Sbjct: 1009 VGSTATASLWDLSTPRTPKLRGPAITSPTGKA---AFSGTVQTSPDGNTIAIGSN---DG 1062

Query: 415  GSKLYSIDLNGRNETLIN 432
              +L+ I  + R+  L+ 
Sbjct: 1063 TVRLWDI-TDPRHPILLP 1079



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 85/247 (34%), Gaps = 25/247 (10%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS---MILA 262
            +       +    FSP+   +        D   ++L +    R P  + +       + +
Sbjct: 1081 VLNGLSTPVETIAFSPDGHIITVGA----DEATIHLWNITDLRNPIALPSITGPTNYVFS 1136

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFE 319
              FS NG+    +   D  + ++ V   + A      L        +  +SP+   +   
Sbjct: 1137 LAFSPNGRVLA-AGSADYDVRLWDVSDPARAVSLGPALATHTNYVYAVVFSPNGRVLA-A 1194

Query: 320  SDREGKEQLYVMQSNGSDQ---KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            S  +   QL+ +            ++     +Y     S  G L+A +   G  +   V 
Sbjct: 1195 SSADETVQLWDVTDPAKPVALGPALTGPNSGTYAAAFGS-GGGLLAASTGEGTVWLWDVT 1253

Query: 377  KKDGSQERLLVEDSNLQAPTWSPS---GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                 + R L   + L  P +        +++ +  +  +T  K+++ D+   N+T+ + 
Sbjct: 1254 DP--RRPRFLETLAELNGPIFGADLDPESTILVAGSRTKNT-IKIWNTDV---NQTINDI 1307

Query: 434  PAYASDP 440
             A   DP
Sbjct: 1308 CATVGDP 1314



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 77/242 (31%), Gaps = 27/242 (11%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRALIS 275
            SP+   +A  + D      V L D    R P  +    + +  P     FS +G    + 
Sbjct: 1049 SPDGNTIAIGSNDG----TVRLWDITDPRHPILLPAVLNGLSTPVETIAFSPDGHIITVG 1104

Query: 276  VQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
              +         DL++  A   +T       S ++SP+   +       G     V   +
Sbjct: 1105 ADEATIHLWNITDLRNPIALPSITGPTNYVFSLAFSPNGRVLA-----AGSADYDVRLWD 1159

Query: 335  GSDQKRISQDKEA------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERL 385
             SD  R      A        +  V+SP G ++A +          V            L
Sbjct: 1160 VSDPARAVSLGPALATHTNYVYAVVFSPNGRVLAASSADETVQLWDVTDPAKPVALGPAL 1219

Query: 386  LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
               +S   A  +   G  L  S    G+    L+ +  + R    + T A  + P +   
Sbjct: 1220 TGPNSGTYAAAFGSGGGLLAAST---GEGTVWLWDV-TDPRRPRFLETLAELNGPIFGAD 1275

Query: 446  MD 447
            +D
Sbjct: 1276 LD 1277


>gi|119509801|ref|ZP_01628945.1| WD-40 repeat-protein [Nodularia spumigena CCY9414]
 gi|119465536|gb|EAW46429.1| WD-40 repeat-protein [Nodularia spumigena CCY9414]
          Length = 798

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 70/199 (35%), Gaps = 15/199 (7%)

Query: 186 SGIIKNSLCVMDR-DGA----NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           SG  K  +  +   DG       R  T      +     S + + +A  + D +    + 
Sbjct: 610 SGSHKIKIWNLHTGDGQSRAGGERICTLWHSFAVHAVAISRDGKILASGSADSK----IR 665

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L + R     + +      + +   S +G + + S   D+ + I+ +         L++ 
Sbjct: 666 LWNPRTGDPLRTLIGHSDEVKSLAMSPDG-QLIFSASADKTIKIWQLS-TGELLHTLSSH 723

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S + SPD   + F S  +  + + + Q +  +  +       +      SP G L
Sbjct: 724 ADEVKSLAISPDGKTL-FSSSAD--KTIKIWQLSTGEVLQTLTGHSGTVNAISLSPDGKL 780

Query: 361 IAFTKFSGEKFAIGVMKKD 379
           +A +  + +   I  +  D
Sbjct: 781 LA-SGSADKTIKIWQIADD 798



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 102/318 (32%), Gaps = 40/318 (12%)

Query: 113 TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
              V       + V         +W+++  KQI  +    +      +A           
Sbjct: 509 VTSVAISSDGEVLVSGCAEKTINIWNLQTGKQI--RTLTGNEGEVSSVA----------- 555

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                  +S+ L V         K+++ V +     + +      + +     S + Q +
Sbjct: 556 ----ISRDSKFLAV---GSCEHPKSNVKVWNLKTGRLLHTLLGHQKPVNVVAMSHDGQIL 608

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDI 284
           A  ++  + I  ++  D +     +RI        + A   S +GK    S   D  + +
Sbjct: 609 ASGSHKIK-IWNLHTGDGQSRAGGERICTLWHSFAVHAVAISRDGKILA-SGSADSKIRL 666

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           ++     +    L        S + SPD  Q++F +  +  + + + Q +  +       
Sbjct: 667 WN-PRTGDPLRTLIGHSDEVKSLAMSPDG-QLIFSASAD--KTIKIWQLSTGELLHTLSS 722

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRS 403
                     SP G  + F+  + +   I      G   + L      + A + SP G+ 
Sbjct: 723 HADEVKSLAISPDGKTL-FSSSADKTIKIW-QLSTGEVLQTLTGHSGTVNAISLSPDGKL 780

Query: 404 LIFSRKKDGDTGSKLYSI 421
           L        D   K++ I
Sbjct: 781 LA---SGSADKTIKIWQI 795



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 61/188 (32%), Gaps = 33/188 (17%)

Query: 103 WNSLGAQVLVT---GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS 159
           W+S     +     G+++  G    ++  RLW+ +    +              I H  S
Sbjct: 638 WHSFAVHAVAISRDGKILASGSADSKI--RLWNPRTGDPLRTL-----------IGH--S 682

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D++        G    +++F      S     ++ +       + +   S    +     
Sbjct: 683 DEVKSLAMSPDG----QLIF------SASADKTIKIWQLSTGELLHTLSSHADEVKSLAI 732

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +  ++ D      + +         + +      + A   S +GK    S   D
Sbjct: 733 SPDGKTLFSSSADK----TIKIWQLSTGEVLQTLTGHSGTVNAISLSPDGKLLA-SGSAD 787

Query: 280 EAMDIYSV 287
           + + I+ +
Sbjct: 788 KTIKIWQI 795


>gi|94496092|ref|ZP_01302670.1| acylaminoacyl-peptidase [Sphingomonas sp. SKA58]
 gi|94424271|gb|EAT09294.1| acylaminoacyl-peptidase [Sphingomonas sp. SKA58]
          Length = 705

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 44/217 (20%), Positives = 76/217 (35%), Gaps = 28/217 (12%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           ANIR         L  P  +    +     ++    ++  L  T + +  + IG+  S +
Sbjct: 3   ANIRGCLGLVVLCLLFPATAWANCEDVLPAHEASSTVKRDLTATDLIQL-REIGDPDSAV 61

Query: 261 L---AP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQ 315
               +P   S +G R    + +         DL +N+  R L  +   +      P    
Sbjct: 62  FNGPSPFAVSPDGTRVAYIINR--------ADLATNSYYRALMVSRIQDAGP---PS--- 107

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                DR G E + +M                    P WSP G  +A+ +         V
Sbjct: 108 ---VVDRGG-ELIKIMDVQRGF---YLPSGATRTIVPSWSPDGRRLAYLRRDRGVTQAWV 160

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
            + DGS  R +   D +++A  WS  G  L++  +K 
Sbjct: 161 AQADGSGARAVTRSDVDVEAVAWSKDGTRLLYGTRKG 197



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 2/85 (2%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            PS       P +SP+ +++AY   D    +    +        + +      + A  +S
Sbjct: 127 LPSGATRTIVPSWSPDGRRLAYLRRDRG--VTQAWVAQADGSGARAVTRSDVDVEAVAWS 184

Query: 267 SNGKRALISVQKDEAMDIYSVDLQS 291
            +G R L   +K  A     +D + 
Sbjct: 185 KDGTRLLYGTRKGAAAVQAELDREG 209



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 45/134 (33%), Gaps = 20/134 (14%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD +++ +  +R          +  S  + +   +      P    +G  +        
Sbjct: 71  SPDGTRVAYIINRADL-------ATNSYYRALMVSRIQDAGPPSVVDRGGELIKIMDVQR 123

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            F +      G+   ++        P+WSP GR L + R+  G T + +   D +G    
Sbjct: 124 GFYL----PSGATRTIV--------PSWSPDGRRLAYLRRDRGVTQAWVAQADGSGARA- 170

Query: 430 LINTPAYASDPQWV 443
           +  +        W 
Sbjct: 171 VTRSDVDVEAVAWS 184


>gi|75909482|ref|YP_323778.1| pentapeptide repeat-containing protein [Anabaena variabilis ATCC
            29413]
 gi|75703207|gb|ABA22883.1| Pentapeptide repeat protein [Anabaena variabilis ATCC 29413]
          Length = 1474

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 56/330 (16%), Positives = 119/330 (36%), Gaps = 43/330 (13%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISD----------- 160
            R+I  G     V  RLWDV+       I G        ++     T++            
Sbjct: 1081 RIIASGGADHTV--RLWDVQSGECLNVIQGHTNVVRSVAFNSSGQTLASGSYDKTLKIWD 1138

Query: 161  -DIYQSITGEKGD--FNSRILF-VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             + Y+ +T  +G   + S + F  S    +    ++  + D +              +F 
Sbjct: 1139 INTYECLTTVQGHTNWISSVAFNPSGRTFASGGNDATIIWDANTGKCLKTLQIHTAWVFS 1198

Query: 217  PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              FS   + +A ++ D +    V L +       K +      + +  FS++GK    S 
Sbjct: 1199 VAFSSCGKMLASSSADAK----VRLWNIDTGECLKILNGHTYWVFSVAFSADGKLLASSG 1254

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV---FESDREGKEQLYVMQS 333
              D+ + ++S++        +        S +++P +  +    F+S      Q+ +   
Sbjct: 1255 S-DKTLKVWSIE-TGQCLTTIHANQGTVHSVAFNPVNRTLANGGFDS------QVKLWDV 1306

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-- 391
            N  +  +I Q    +     + P G ++A          I +   D S+   +++  +  
Sbjct: 1307 NTGECLKILQGHSGTIRSVDFHPGGKILASGSADCT---IRLWDVDTSECVKILQGHSKV 1363

Query: 392  LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +Q+  +S  G+ L    +   D   KL++I
Sbjct: 1364 VQSIAFSSDGQILATGSE---DFTIKLWNI 1390



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 31/189 (16%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                      + +LWDV   + +   +            H        S T    DF+  
Sbjct: 1290 RTLANGGFDSQVKLWDVNTGECLKILQ-----------GH--------SGTIRSVDFHPG 1330

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               ++    SG    ++ + D D +    +     +++    FS + Q +A  + D    
Sbjct: 1331 GKILA----SGSADCTIRLWDVDTSECVKILQGHSKVVQSIAFSSDGQILATGSED---- 1382

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TE 295
              + L +       + +    + +L+  FS + K   IS  +DE + ++  D+++    +
Sbjct: 1383 FTIKLWNIFTGECFQTLWGHTTWVLSVAFSPDCKTL-ISGSQDETIKVW--DIKTGDCIK 1439

Query: 296  RLTNTLFIN 304
             L +  F  
Sbjct: 1440 TLRSDRFYE 1448



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 82/237 (34%), Gaps = 15/237 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G     + ++D        +      I+    FSP+ Q +A  +YD      + L   +
Sbjct: 875  TGDGNGIVRLLDAATCKEILICKGHGSIIPCVAFSPSAQILASGSYDQ----TIKLWSIQ 930

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 K +    S I +  FS +G   L S   D  + ++++D    + + L        
Sbjct: 931  TGECLKILQGHVSGIRSIAFSPSGA-ILASSGNDNIIRLWNID-TGESLKTLHGHRDHVY 988

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S ++ P    +V  S   G + + +   N     +I +    +      +  G++IA + 
Sbjct: 989  SVAFDPSGMILVSGS---GDQTIRIWDINSGKCLKILEGHTNAIRSIALNSTGEIIASSS 1045

Query: 366  FSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   IG+      +   +L   ++        +   +I       D   +L+ +
Sbjct: 1046 SD---HTIGLWDIKTGKCLNILRGHTDNVMSVVFNNSDRII--ASGGADHTVRLWDV 1097


>gi|332707409|ref|ZP_08427459.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332353900|gb|EGJ33390.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 601

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 96/241 (39%), Gaps = 41/241 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ Q +  A+ D+   L       +  +  K +   + ++++  FS +G+  L +  +
Sbjct: 23  FSPDGQTILTASEDNTAKLW-----DKQGQLIKTLSGHKDIVVSAIFSPDGQTIL-TASR 76

Query: 279 DEAMDIYSVDLQSNATERLTNTLFIN----------ISASYSPDSSQIVFESDREGKEQL 328
           D+   ++  D   N    L      +           SA +SPD ++I+  S    K+  
Sbjct: 77  DKTAKLW--DNDGNLITTLNQDSCWHVHIKDYHCGLTSAVFSPDGTKIITTS----KDNT 130

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             + ++  +  +I +         ++S  G +I  ++ S  K    +  KDG   + L  
Sbjct: 131 AKLWNHNGELIKILKRHTGWVNSALFSQDGKIITASEDSTAK----LWDKDGKLIKTL-- 184

Query: 389 DSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNG-----RNETLINTPAYASD 439
            +    P     +SP G ++I     D    +K++ +D N       ++  + T A+A  
Sbjct: 185 -AGHSEPVKKALFSPEGNNIITVSDDD---TAKIWDLDGNAIAKLIGHQLSVTTAAFAPH 240

Query: 440 P 440
            
Sbjct: 241 G 241



 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 81/196 (41%), Gaps = 28/196 (14%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           N +  + +  FS +G+  L +  +D    ++  D Q    + L+    I +SA +SPD  
Sbjct: 13  NGQCQVNSAVFSPDGQTIL-TASEDNTAKLW--DKQGQLIKTLSGHKDIVVSAIFSPDGQ 69

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEA---------SYFDPVWSPQGDLIAFTK 365
            I+  + R+   +L+   ++G+    ++QD                 V+SP G  I  T 
Sbjct: 70  TIL-TASRDKTAKLW--DNDGNLITTLNQDSCWHVHIKDYHCGLTSAVFSPDGTKIITTS 126

Query: 366 FSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                    +   +G   ++L      + +  +S  G+ +        D+ +KL+  D +
Sbjct: 127 KDNTA---KLWNHNGELIKILKRHTGWVNSALFSQDGKII----TASEDSTAKLW--DKD 177

Query: 425 GRNETLINTPAYASDP 440
           G+   LI T A  S+P
Sbjct: 178 GK---LIKTLAGHSEP 190



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 92/252 (36%), Gaps = 30/252 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +    N+  + + +G  I+ +       +    FS + + +  +      +        +
Sbjct: 124 TTSKDNTAKLWNHNGELIK-ILKRHTGWVNSALFSQDGKIITASEDSTAKLWD------K 176

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  K +      +    FS  G    I+V  D+   I+  DL  NA  +L        
Sbjct: 177 DGKLIKTLAGHSEPVKKALFSPEGNNI-ITVSDDDTAKIW--DLDGNAIAKLIGHQLSVT 233

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A+++P   +++  SD +   +L+ +     +    S    A+    V+SP G  I    
Sbjct: 234 TAAFAPHGDKLITASD-DSTVKLWDIIQQPVNS---SFRHSAAVNSAVFSPDGTKILTAT 289

Query: 366 FSGEKFAIGVMKKDGSQERLLVED---SNLQAPT---WSPSGRSLIFSRKKDGDTGSKLY 419
                +   +    G   + L      SN  A     +SP+G  +I +     D  ++L+
Sbjct: 290 TEKNAY---LWDMSGKLLKQLPHGCDVSNHCAVKKALFSPNGNYIITTSD---DGKTRLW 343

Query: 420 SIDLNGRNETLI 431
               NG+ + LI
Sbjct: 344 ----NGKGDRLI 351



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 47/246 (19%), Positives = 94/246 (38%), Gaps = 21/246 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++++    N+  + D+ G  I+ L+  +D I+    FSP+ Q +  A+ D    L    
Sbjct: 28  QTILTASEDNTAKLWDKQGQLIKTLSGHKD-IVVSAIFSPDGQTILTASRDKTAKLWDND 86

Query: 242 MDTRIDRAP-----KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            +              I ++   + +  FS +G +  I+  KD    ++  +      + 
Sbjct: 87  GNLITTLNQDSCWHVHIKDYHCGLTSAVFSPDGTKI-ITTSKDNTAKLW--NHNGELIKI 143

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L        SA +S D   I    D   K    +   +G   K ++   E      ++SP
Sbjct: 144 LKRHTGWVNSALFSQDGKIITASEDSTAK----LWDKDGKLIKTLAGHSE-PVKKALFSP 198

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +G+ I             +   DG+   +L+    ++    ++P G  LI +     D+ 
Sbjct: 199 EGNNIITVSDDDTA---KIWDLDGNAIAKLIGHQLSVTTAAFAPHGDKLITASD---DST 252

Query: 416 SKLYSI 421
            KL+ I
Sbjct: 253 VKLWDI 258



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 67/178 (37%), Gaps = 26/178 (14%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAP 263
                 ++     SPN+Q++  A+ D         +    +   + I +F+     + + 
Sbjct: 408 YNGHKGVVNSAVLSPNRQQILTASDDK--------LAKLWNVNGEIITDFKGHTDVVNSA 459

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDL------QSNATERLTNTLFINISASYSPDSSQIV 317
            FS +GK  L S   D  + ++ ++            +     +F   SA +SPD   I+
Sbjct: 460 VFSPDGKTIL-SASADHTIKLWDLNGNLIRTFAGGREQ---GHMFDVNSAVFSPDGKTIL 515

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             S  +   +L+ +         + +D  A+    V+SP G  I  T FS     + +
Sbjct: 516 SASS-DKTARLWDLN---GRLILVMRDHNAAVNSAVFSPDGTKIL-TAFSNGTARVWL 568



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 97/269 (36%), Gaps = 30/269 (11%)

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK------NSLCVMDRDGANIR 204
            +++ H    D+      +K  F+    ++  +   G  +      + L +      +  
Sbjct: 304 LKQLPHGC--DVSNHCAVKKALFSPNGNYIITTSDDGKTRLWNGKGDRLIMAINLHNHYN 361

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            LT           FS + Q++   +YD     +++                + ++ +  
Sbjct: 362 NLTIFGSNGAKFASFSQDDQQILTTSYD--HTAKLWNFSGSELIEISEYNGHKGVVNSAV 419

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INI--SASYSPDSSQIVFESD 321
            S N ++ L +   D+   +++V+      E +T+     ++  SA +SPD   I+  S 
Sbjct: 420 LSPNRQQIL-TASDDKLAKLWNVNG-----EIITDFKGHTDVVNSAVFSPDGKTILSAS- 472

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASY----FDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                 + +   NG+  +  +  +E  +       V+SP G  I             +  
Sbjct: 473 --ADHTIKLWDLNGNLIRTFAGGREQGHMFDVNSAVFSPDGKTILSASSDKTA---RLWD 527

Query: 378 KDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
            +G    ++ + ++ + +  +SP G  ++
Sbjct: 528 LNGRLILVMRDHNAAVNSAVFSPDGTKIL 556



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 81/226 (35%), Gaps = 36/226 (15%)

Query: 219 FSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           FSPN   +   +       ++ +    +  ++         I        A  FS + ++
Sbjct: 324 FSPNGNYIITTSDDGKTRLWNGKGDRLIMAINLHNHYNNLTIFGSNGAKFA-SFSQDDQQ 382

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDREGKEQL 328
            L +   D    ++  +   +    ++       +  SA  SP+  QI+  SD    +  
Sbjct: 383 IL-TTSYDHTAKLW--NFSGSELIEISEYNGHKGVVNSAVLSPNRQQILTASD---DKLA 436

Query: 329 YVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +   NG     I+  K  +      V+SP G  I           I +   +G+  R  
Sbjct: 437 KLWNVNGEI---ITDFKGHTDVVNSAVFSPDGKTILSASAD---HTIKLWDLNGNLIRTF 490

Query: 387 VED------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                     ++ +  +SP G++++ +     D  ++L+  DLNGR
Sbjct: 491 AGGREQGHMFDVNSAVFSPDGKTILSASS---DKTARLW--DLNGR 531



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 76/196 (38%), Gaps = 10/196 (5%)

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC-V 195
           +QI+   +  +   W      +  +I +     KG  NS +L  +   +     + L  +
Sbjct: 381 QQILTTSYDHTAKLWNFSGSEL-IEISEYNGH-KGVVNSAVLSPNRQQILTASDDKLAKL 438

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIG 254
            + +G  I         ++    FSP+ + +  A+ D    +  +     R     +  G
Sbjct: 439 WNVNGE-IITDFKGHTDVVNSAVFSPDGKTILSASADHTIKLWDLNGNLIRTFAGGREQG 497

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +   +  A  FS +GK  L S   D+   ++  DL       + +      SA +SPD +
Sbjct: 498 HMFDVNSA-VFSPDGKTIL-SASSDKTARLW--DLNGRLILVMRDHNAAVNSAVFSPDGT 553

Query: 315 QIVFESDREGKEQLYV 330
           +I+  +   G  ++++
Sbjct: 554 KIL-TAFSNGTARVWL 568


>gi|261878659|ref|ZP_06005086.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270334663|gb|EFA45449.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 736

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 96/275 (34%), Gaps = 32/275 (11%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDD 233
           G   ++L V   DG++ +  T     I++                +SP+ QK+ +   D 
Sbjct: 160 GKDGHNLFVRKADGSSKQLTTDGSADIVYGQSVHRDEFGYTKGTFWSPDGQKLLFTRMDQ 219

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
             +    L++     +  R G  R    AP      ++  ++ +    + I   +LQ+  
Sbjct: 220 SMVTSFPLVNIPTPDSKPREGQSRIATPAP------EKYPMAGEPMHKVTIGIHNLQNGN 273

Query: 294 TERLTNTLFIN---ISASYSPDSSQIV-FESDREGKE-QLYVMQSNGSDQKRISQDKEAS 348
           T  L      +    + ++SPD+  +  FE +R+  + +L    +   ++      +   
Sbjct: 274 TIYLKTGDPTDRYFTNPAWSPDAKTVYLFELNRDQNDCRLVSYDAETGEKIAELYRESHE 333

Query: 349 YFDPVWSP------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPS 400
            +     P                      + +  K G+  + L       ++   ++  
Sbjct: 334 KYVEPLHPIVFLPWDDSKFVMQSQRDGYNHLYLFNKKGNLIKQLTRGQWVVMELLGFNQK 393

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +S+I +  +       L+S+++     TL++   
Sbjct: 394 DKSVIIASNERHAIQRNLFSVNVKNGKRTLLDENG 428


>gi|145528930|ref|XP_001450254.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417864|emb|CAK82857.1| unnamed protein product [Paramecium tetraurelia]
          Length = 265

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 81/230 (35%), Gaps = 36/230 (15%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWDVK  +Q                           + G  G F S       + ++ 
Sbjct: 1   IRLWDVKTGQQKA------------------------KLDGHSGTFYSVNFSPDGTTLAS 36

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             + S+ + D      +         +    FSP+   +A  +YD      + L D    
Sbjct: 37  GGEYSIRLWDVKTGQQKAKLDGHSNFVITVNFSPDGTTLASGSYDK----SIRLWDVMTG 92

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINIS 306
           +   ++    S +++  FS +      S   D+++ ++  D+++     +L       +S
Sbjct: 93  QQIAKLDGHSSYVMSVNFSPDSTTLA-SGSYDKSIRLW--DVKTVQQKTKLDGHSSTVLS 149

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            ++SPDS+ +   S   G + + +       + + S ++        +SP
Sbjct: 150 VNFSPDSTTLASGS---GDKSIRLWDVKTGQEIQQSDNRYKDILAQ-FSP 195



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 32/197 (16%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
                      +  RLWDVK  +Q                 H  S+ +        G   
Sbjct: 31  GTTLASGGEYSI--RLWDVKTGQQKAKLD-----------GH--SNFVITVNFSPDG--- 72

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                   ++ SG    S+ + D                +    FSP+   +A  +YD  
Sbjct: 73  -------TTLASGSYDKSIRLWDVMTGQQIAKLDGHSSYVMSVNFSPDSTTLASGSYDK- 124

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               + L D +  +   ++    S +L+  FS +      S   D+++ ++  D+++   
Sbjct: 125 ---SIRLWDVKTVQQKTKLDGHSSTVLSVNFSPDSTTLA-SGSGDKSIRLW--DVKTGQE 178

Query: 295 ERLTNTLFINISASYSP 311
            + ++  + +I A +SP
Sbjct: 179 IQQSDNRYKDILAQFSP 195



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 18/156 (11%)

Query: 288 DLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D+++   + +L        S ++SPD + +       G+  + +       QK       
Sbjct: 5   DVKTGQQKAKLDGHSGTFYSVNFSPDGTTLA----SGGEYSIRLWDVKTGQQKAKLDGHS 60

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLI 405
                  +SP G  +A   +        VM   G Q   L    S + +  +SP   +L 
Sbjct: 61  NFVITVNFSPDGTTLASGSYDKSIRLWDVM--TGQQIAKLDGHSSYVMSVNFSPDSTTLA 118

Query: 406 FSRKKDGDTGSKLYSI-------DLNGRNETLINTP 434
                  D   +L+ +        L+G + T+++  
Sbjct: 119 SGSY---DKSIRLWDVKTVQQKTKLDGHSSTVLSVN 151



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 38/96 (39%), Gaps = 9/96 (9%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +       QK        +++   +SP G  +A    SG +++I +      Q++  +
Sbjct: 1   IRLWDVKTGQQKAKLDGHSGTFYSVNFSPDGTTLA----SGGEYSIRLWDVKTGQQKAKL 56

Query: 388 EDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
           +  +    T  +SP G +L        D   +L+ +
Sbjct: 57  DGHSNFVITVNFSPDGTTLASGSY---DKSIRLWDV 89



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 50/164 (30%), Gaps = 32/164 (19%)

Query: 108 AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
           +  ++T     +G            RLWDV   +QI                H  S  + 
Sbjct: 60  SNFVITVNFSPDGTTLASGSYDKSIRLWDVMTGQQIAKLD-----------GH--SSYVM 106

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                            S ++ SG    S+ + D      +         +    FSP+ 
Sbjct: 107 SVNFSPD----------STTLASGSYDKSIRLWDVKTVQQKTKLDGHSSTVLSVNFSPDS 156

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
             +A  + D      + L D +  +  ++  N    ILA +FS 
Sbjct: 157 TTLASGSGDK----SIRLWDVKTGQEIQQSDNRYKDILA-QFSP 195


>gi|88859948|ref|ZP_01134587.1| peptidase, putative [Pseudoalteromonas tunicata D2]
 gi|88817942|gb|EAR27758.1| peptidase, putative [Pseudoalteromonas tunicata D2]
          Length = 675

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 79/251 (31%), Gaps = 23/251 (9%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D      +   +  +     ++   +   +     E+ ++     T           F 
Sbjct: 160 FDSEKHHAMEYDQLMVRHWDTWADRFRSHIFVADITENPIKDAKDLTPDWDTDIPAKPFA 219

Query: 258 SMILAPRFSSNGKRALISV---QKDE----AMDIYSVDLQSNATERLTN-TLFINISASY 309
            M     F+ +    + S     KD       D++ V ++  A E LT   L  +    +
Sbjct: 220 GME-EVTFTPDSLNVVFSAKAPSKDHAWTTNFDLFKVSIEGGAVENLTKENLAWDSQPQF 278

Query: 310 SPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           S D   +         FE+DR G   L V          ++   + S     +SP    +
Sbjct: 279 SADGRFMAYLAMKKPGFEADRFG---LMVKDLKTGKLDEVAPLWDRSIDSYQFSPNNRAV 335

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             T     +  I  +  +    R +  + +      + +   +IFSR         +Y I
Sbjct: 336 YVTTQDVGQKGIYEISTNFGDVRKVFSNGSAGDVQLTDN--KIIFSRHTLSSP-KDIYQI 392

Query: 422 DLNGRNETLIN 432
           +L+G   T + 
Sbjct: 393 NLDGSELTQLT 403



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 41/101 (40%), Gaps = 3/101 (2%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESD 321
             S +G + + S++     D+Y   L +     +RLT+        ++  D   I F ++
Sbjct: 39  SVSPDGSQLIYSLKTPTGSDLYLKSLSNPKQADKRLTSYPGSESDVTWLNDGKSIYFLAN 98

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           R+   Q++ +   G +   ++ D   S      SP    +A
Sbjct: 99  RKASHQVWQLNLTGGEATPVT-DLALSVNGYKLSPDNKKLA 138



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/253 (11%), Positives = 77/253 (30%), Gaps = 60/253 (23%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  ++ Y+              +   +A KR+ ++        + ++GK       
Sbjct: 39  SVSPDGSQLIYSLKTPTGSDLYLKSLSNPKQADKRLTSYPGSESDVTWLNDGKSIYFLAN 98

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-------------------- 317
           +  +  ++ ++L       +T+          SPD+ ++                     
Sbjct: 99  RKASHQVWQLNLTGGEATPVTDLALSVNGYKLSPDNKKLALALEVVPGCETISCTIEKTK 158

Query: 318 -FESDREG-------------------KEQLYVMQSNGS---DQKRISQD--------KE 346
            F+S++                     +  ++V     +   D K ++ D          
Sbjct: 159 IFDSEKHHAMEYDQLMVRHWDTWADRFRSHIFVADITENPIKDAKDLTPDWDTDIPAKPF 218

Query: 347 ASYFDPVWSPQGDLIAFTKFSG-------EKFAIGVMKKDGSQERLLVEDSNLQA--PTW 397
           A   +  ++P    + F+  +          F +  +  +G     L +++      P +
Sbjct: 219 AGMEEVTFTPDSLNVVFSAKAPSKDHAWTTNFDLFKVSIEGGAVENLTKENLAWDSQPQF 278

Query: 398 SPSGRSLIFSRKK 410
           S  GR + +   K
Sbjct: 279 SADGRFMAYLAMK 291



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/288 (12%), Positives = 88/288 (30%), Gaps = 70/288 (24%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +  + + + +    +                   + +    +   + S + K+  ++++
Sbjct: 85  TWLNDGKSIYFLA--NRKASHQVWQLNLTGGEATPVTDLALSVNGYKLSPDNKKLALALE 142

Query: 278 ----------------------------------------KDEAMDIYSVDLQS---NAT 294
                                                         I+  D+        
Sbjct: 143 VVPGCETISCTIEKTKIFDSEKHHAMEYDQLMVRHWDTWADRFRSHIFVADITENPIKDA 202

Query: 295 ERLTNTLFINISA---------SYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQ 338
           + LT     +I A         +++PDS  +VF +    K+  +    +       G   
Sbjct: 203 KDLTPDWDTDIPAKPFAGMEEVTFTPDSLNVVFSAKAPSKDHAWTTNFDLFKVSIEGGAV 262

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGS--QERLLVEDSN 391
           + ++++  A    P +S  G  +A+       F  ++F + V         E   + D +
Sbjct: 263 ENLTKENLAWDSQPQFSADGRFMAYLAMKKPGFEADRFGLMVKDLKTGKLDEVAPLWDRS 322

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           + +  +SP+ R++  + +  G  G  +Y I  N  +   + +   A D
Sbjct: 323 IDSYQFSPNNRAVYVTTQDVGQKG--IYEISTNFGDVRKVFSNGSAGD 368



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 64/166 (38%), Gaps = 10/166 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRID 247
            L  +  +G  +  LT        +P+FS + + +AY          D   + + D +  
Sbjct: 251 DLFKVSIEGGAVENLTKENLAWDSQPQFSADGRFMAYLAMKKPGFEADRFGLMVKDLKTG 310

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINIS 306
           +  +    +   I + +FS N +   ++ Q      IY +        ++ +N    ++ 
Sbjct: 311 KLDEVAPLWDRSIDSYQFSPNNRAVYVTTQDVGQKGIYEISTNFGDVRKVFSNGSAGDVQ 370

Query: 307 ASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFD 351
            +     ++I+F        + +Y +  +GS+  +++   + +  D
Sbjct: 371 LT----DNKIIFSRHTLSSPKDIYQINLDGSELTQLTDVNKTNLAD 412



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/184 (13%), Positives = 64/184 (34%), Gaps = 17/184 (9%)

Query: 218 RFSPNQQKVAYATYDDED------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            F+P+   V ++               ++ +               +    P+FS++G+ 
Sbjct: 225 TFTPDSLNVVFSAKAPSKDHAWTTNFDLFKVSIEGGAVENLTKENLAWDSQPQFSADGRF 284

Query: 272 ALI-SVQKDE----AMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVFESDREG 324
               +++K         +   DL++   + +       I+ S  +SP++  +   +   G
Sbjct: 285 MAYLAMKKPGFEADRFGLMVKDLKTGKLDEVAPLWDRSID-SYQFSPNNRAVYVTTQDVG 343

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           ++ +Y + +N  D +++  +  A            +I           I  +  DGS+  
Sbjct: 344 QKGIYEISTNFGDVRKVFSNGSAGDVQLT---DNKIIFSRHTLSSPKDIYQINLDGSELT 400

Query: 385 LLVE 388
            L +
Sbjct: 401 QLTD 404



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 32/86 (37%), Gaps = 5/86 (5%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIF 406
            +   SP G  + ++  +     + +        + +RL     +    TW   G+S+ F
Sbjct: 36  GNISVSPDGSQLIYSLKTPTGSDLYLKSLSNPKQADKRLTSYPGSESDVTWLNDGKSIYF 95

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLIN 432
              +      +++ ++L G   T + 
Sbjct: 96  LANR--KASHQVWQLNLTGGEATPVT 119


>gi|295798165|emb|CAX69026.1| hypothetical protein, TolB-like family [uncultured bacterium]
          Length = 947

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 22/119 (18%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-------------QL 328
           + IY ++L++ A  +LT   + ++  +Y+P+   IVF S+R G                L
Sbjct: 266 IHIYEMNLKNGALRQLTRGEWSDLDPTYAPNGD-IVFVSERCGTSLQCNEYDKDETSCNL 324

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGS 381
           YVM+ +GS  +R+S +K+  Y        G  IA+T++   +       +I  ++ DG+
Sbjct: 325 YVMKPDGSGIRRLSANKDGDYLPHTL-DDGT-IAYTRWEYHERSWAFIQSIWTIRPDGT 381



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 76/265 (28%), Gaps = 63/265 (23%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM------------- 282
            + +Y M+ + + A +++       L P ++ NG   +   ++                 
Sbjct: 265 PIHIYEMNLK-NGALRQLTRGEWSDLDPTYAPNGD-IVFVSERCGTSLQCNEYDKDETSC 322

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----DREGK--EQLYVMQSNGS 336
           ++Y +    +   RL+     +       D + I +      +R     + ++ ++ +G+
Sbjct: 323 NLYVMKPDGSGIRRLSANKDGDYLPHTLDDGT-IAYTRWEYHERSWAFIQSIWTIRPDGT 381

Query: 337 DQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG---VMKK-----DGSQERL 385
               +         +  +    P    +           +G   V+         S   +
Sbjct: 382 MADAVFKQHFVNPWALEETRSIPGSRKLVAVAAGHHTLPVGPLVVVDTGVGVNTTSGMSI 441

Query: 386 LV------EDSNLQAPT---------------WSPSGRSLIFSRKKDGD---TGSKLYSI 421
           L       E      P                W+ S +  + +         TG  LY +
Sbjct: 442 LTPGVKPPEGGMDGVPVAGGGVLDGGGCYATPWALSEKFFLAAYNYGKQTDPTGYGLYLV 501

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
           D  G  E +        DP    FM
Sbjct: 502 DAFGNRELIW------RDPAISCFM 520



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 30/85 (35%), Gaps = 13/85 (15%)

Query: 365 KFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG----------- 412
           + + E   I  M       R L     +   PT++P+G  ++F  ++ G           
Sbjct: 260 RRTVEPIHIYEMNLKNGALRQLTRGEWSDLDPTYAPNGD-IVFVSERCGTSLQCNEYDKD 318

Query: 413 DTGSKLYSIDLNGRNETLINTPAYA 437
           +T   LY +  +G     ++     
Sbjct: 319 ETSCNLYVMKPDGSGIRRLSANKDG 343


>gi|188995013|ref|YP_001929265.1| prolyl tripeptidase A [Porphyromonas gingivalis ATCC 33277]
 gi|298351803|sp|B2RJX3|PTP_PORG3 RecName: Full=Prolyl tripeptidyl peptidase; Short=PTP; AltName:
           Full=Prolyl tripeptidyl peptidase A; Flags: Precursor
 gi|188594693|dbj|BAG33668.1| prolyl tripeptidase A [Porphyromonas gingivalis ATCC 33277]
          Length = 732

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 48/335 (14%), Positives = 107/335 (31%), Gaps = 58/335 (17%)

Query: 127 EFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-- 183
            FR  D    + ++  ++         +    + D   ++ + +      R+ +V     
Sbjct: 110 SFRTLDAGRGQVVLFTQRGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNL 169

Query: 184 -----VVSGIIKNSLCVMDRDGANI----RYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                   G   +    +  DGA      + +      I     +SP    +A+   D  
Sbjct: 170 YIARGGKLGEGMSRAIAVTIDGAETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQS 229

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPR------------------------------ 264
            +    ++D     A  +   +  M   P                               
Sbjct: 230 MVKPTPIVDYHPLEAESKPLYYP-MAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 288

Query: 265 --FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----SA----SYSPDS 313
             +S + +  L   + + A +   V+     T R   TLF+             ++ P S
Sbjct: 289 LSWSPD-ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGS 347

Query: 314 S-QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEK 370
           + Q +++S R+G   LY+  + G   +++++ +        + P+G  + F     S  +
Sbjct: 348 NNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLE 407

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                +   G + + L  +S +     SP G ++I
Sbjct: 408 RHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAII 442


>gi|91076958|ref|XP_975292.1| PREDICTED: similar to AGAP007626-PA [Tribolium castaneum]
          Length = 346

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 79/210 (37%), Gaps = 19/210 (9%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           L+   FSP+ + +   ++  +    + + +    +A + +      IL+  +S +GK   
Sbjct: 150 LWTVAFSPDDKYIISGSHAGK----ITVYNVETAKAEQTLDTRGKYILSIAYSPDGKYIA 205

Query: 274 ISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            S   D  ++I+  D+  N   + L        S  +SPDS  ++  SD +G  +LY   
Sbjct: 206 -SGAIDGIVNIF--DVAGNKLWQTLEGHAMPIRSLCFSPDSQLLLTASD-DGHMKLY--D 259

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
              ++         +      +SP G    F   S +K  + V +    Q     ++ N 
Sbjct: 260 VQHTNVVGTLSGHASWVVSVAFSPDGKY--FVSGSSDK-TVKVWELASKQCVHTFKEHND 316

Query: 393 --QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                 +SP    ++       D    +YS
Sbjct: 317 QVWGVRFSPDSTKIV---SVSEDKSINVYS 343



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 87/259 (33%), Gaps = 36/259 (13%)

Query: 111 LVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           +V+  V   G       L    R+WD++  K+I        P     +A +  D      
Sbjct: 108 VVSVAVSNNGKLCASSSLDSSMRIWDLERGKKIA--HVDVGPVELWTVAFSPDD------ 159

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                          + ++SG     + V + + A       +R + +    +SP+ + +
Sbjct: 160 ---------------KYIISGSHAGKITVYNVETAKAEQTLDTRGKYILSIAYSPDGKYI 204

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A    D      V + D   ++  + +      I +  FS +  + L++   D  M +Y 
Sbjct: 205 ASGAIDG----IVNIFDVAGNKLWQTLEGHAMPIRSLCFSPD-SQLLLTASDDGHMKLYD 259

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V   +N    L+      +S ++SPD    V  S     + + V +          ++  
Sbjct: 260 VQH-TNVVGTLSGHASWVVSVAFSPDGKYFVSGSS---DKTVKVWELASKQCVHTFKEHN 315

Query: 347 ASYFDPVWSPQGDLIAFTK 365
              +   +SP    I    
Sbjct: 316 DQVWGVRFSPDSTKIVSVS 334



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 31/103 (30%), Gaps = 8/103 (7%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S + S +       S  +   +++        +           +   +SP    I   
Sbjct: 109 VSVAVSNNGKLCA-SSSLDSSMRIW--DLERGKKIAHVDVGPVELWTVAFSPDDKYIISG 165

Query: 365 KFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLI 405
             +G    I V   + ++           + +  +SP G+ + 
Sbjct: 166 SHAG---KITVYNVETAKAEQTLDTRGKYILSIAYSPDGKYIA 205


>gi|190573268|ref|YP_001971113.1| putative exported peptidase [Stenotrophomonas maltophilia K279a]
 gi|190011190|emb|CAQ44800.1| putative exported peptidase [Stenotrophomonas maltophilia K279a]
          Length = 716

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 86/294 (29%), Gaps = 41/294 (13%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R +    S  ++Q+   +      ++    ++  SG + +SL V   D  N
Sbjct: 158 SYHVSPQDDRVL---FSAGVFQACASDLACTEKKLKEKKDAKASGQVWDSLFVRHWDTWN 214

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                  R+ +   P        +  A                 D   K           
Sbjct: 215 ----DGRRNTLFVAP--------LPTAKAGAVKGASALSATIDGDAPSKPF----GGNDD 258

Query: 263 PRFSSNGKRALISVQKDE-------AMDIYSVDLQSNA-TERLT-NTLFINISASYSPDS 313
             +S +G   + S++            D+Y  D         LT +    +    +S D 
Sbjct: 259 FAWSPDGASVVASIRVAGKQEPWSTNFDLYRFDAAGKQAPVNLTASNPAWDAGPVFSADG 318

Query: 314 SQIV--------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             +         FE+DR G   L  M       + I+   + S      S  G  I  T 
Sbjct: 319 KTLFYRAMKRPGFEADRFG---LMAMDLASGKTREIAPQWDRSAGGITLSADGASIYTTA 375

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
               +  +  +     +   L+ D ++ A   +  G S+  +R         L 
Sbjct: 376 DDLGEHPLFQIDVASGKATKLIGDGSVTAVDVA--GNSVAITRNSLKSNDQVLV 427



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 87/255 (34%), Gaps = 32/255 (12%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYL------MDTRIDRAPKRIGNFRSMILAPRFSS 267
           +  P  + +   V +A    +  L+         + TR    PK+I      + +   S+
Sbjct: 60  VSAPVLTADGGTVVFAKRSVDANLKASTALFARNLRTRDAAPPKQITPAGWNVNSASLSA 119

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------- 319
           +G+       ++ +  +Y+  +   A  +LT+      S   SP   +++F         
Sbjct: 120 DGQTVYFLSARNGSQQLYAQPISGGAPRQLTDFPVDVDSYHVSPQDDRVLFSAGVFQACA 179

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK- 378
           SD    E+    + +     ++       ++D  W+       F        A  V    
Sbjct: 180 SDLACTEKKLKEKKDAKASGQVWDSLFVRHWD-TWNDGRRNTLFVAPLPTAKAGAVKGAS 238

Query: 379 ------DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNGRN 427
                 DG         ++  A  WSP G S++ S +  G      T   LY  D  G+ 
Sbjct: 239 ALSATIDGDAPSKPFGGNDDFA--WSPDGASVVASIRVAGKQEPWSTNFDLYRFDAAGKQ 296

Query: 428 ETLINTPAYASDPQW 442
             +  T   AS+P W
Sbjct: 297 APVNLT---ASNPAW 308


>gi|254412796|ref|ZP_05026569.1| DnaJ domain protein [Microcoleus chthonoplastes PCC 7420]
 gi|196180531|gb|EDX75522.1| DnaJ domain protein [Microcoleus chthonoplastes PCC 7420]
          Length = 593

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 72/188 (38%), Gaps = 15/188 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+Q+ +A A+ D      + L         + +      + +   S + +  + S  
Sbjct: 332 TFSPDQKILASASGDK----TIRLWGRYTGDLKRTLNGHSDTVWSVAISPDCQTLV-SGS 386

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + ++S+       + +T       S + SPD  ++   S  +G  +L+    N  +
Sbjct: 387 ADKTIRVWSLS-SYKQPQIITGHSNWVTSVAISPDGKRLASGS-ADGTVKLW--NLNTGE 442

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             +    +         +P G L+A    S ++ A+ +        +LL   +      +
Sbjct: 443 LLKTLDKQLKGIVSVAINPNGQLLA----SADRNAVHLWNLHTG--QLLGTLAGCSPVVF 496

Query: 398 SPSGRSLI 405
           SP G+ L+
Sbjct: 497 SPDGQILV 504



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 84/248 (33%), Gaps = 28/248 (11%)

Query: 135 DRKQIIGKKFFSSPASWR-KIAHTISDDIYQSITGEKGDFNSRILFVSESV--VSGIIKN 191
             K ++   F +  +SW+      +    Y + T     F S + F  +     S     
Sbjct: 288 QGKMLVAGGFDNKISSWQVDSKALLRPFFYPNYTYSHFGFISCLTFSPDQKILASASGDK 347

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++ +  R   +++         ++    SP+ Q +   + D      + +      + P+
Sbjct: 348 TIRLWGRYTGDLKRTLNGHSDTVWSVAISPDCQTLVSGSADK----TIRVWSLSSYKQPQ 403

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-----ERLTNTLFINIS 306
            I    + + +   S +GKR   S   D  + ++  +L +        ++L     I +S
Sbjct: 404 IITGHSNWVTSVAISPDGKRLA-SGSADGTVKLW--NLNTGELLKTLDKQL---KGI-VS 456

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + +P+   +   +DR     +++   +            A     V+SP G  I  +  
Sbjct: 457 VAINPNGQLLA-SADR---NAVHLWNLHTGQL----LGTLAGCSPVVFSPDGQ-ILVSGG 507

Query: 367 SGEKFAIG 374
                 I 
Sbjct: 508 KAGTIKIW 515



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 70/227 (30%), Gaps = 25/227 (11%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +     S + Q +A  + D      V L D +  +           + A   
Sbjct: 230 ILKGHLAKVTAIAISSDGQTLASGSEDK----TVSLWDLKTGKHDFTFFGQAKEVFAVAI 285

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-------SYSPDSSQIVF 318
           S  GK  + +   D  +  + VD  S A  R         S        ++SPD   +  
Sbjct: 286 SPQGKMLV-AGGFDNKISSWQVD--SKALLRPFFYPNYTYSHFGFISCLTFSPDQKILAS 342

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S   G + + +      D KR       + +    SP    +           I V   
Sbjct: 343 AS---GDKTIRLWGRYTGDLKRTLNGHSDTVWSVAISPDCQTLVSGSADKT---IRVWSL 396

Query: 379 DG-SQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               Q +++   SN   +   SP G+ L        D   KL++++ 
Sbjct: 397 SSYKQPQIITGHSNWVTSVAISPDGKRLA---SGSADGTVKLWNLNT 440


>gi|71278558|ref|YP_270185.1| prolyl oligopeptidase family protein [Colwellia psychrerythraea
           34H]
 gi|71144298|gb|AAZ24771.1| prolyl oligopeptidase family protein [Colwellia psychrerythraea
           34H]
          Length = 638

 Score = 67.0 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 78/175 (44%), Gaps = 10/175 (5%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIV 317
           +     +S+    LIS  +    + + + L  +   +LT++    I +  S+ P   + +
Sbjct: 54  VFGSSINSDASAVLISNDETGIFNAFKMPLDGSPPIQLTHSTLESIYVK-SWFPRDDRFL 112

Query: 318 FESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAI 373
           + +D+ G   + LYV + +G +   ++   +   F   W    +   +A  +   + F +
Sbjct: 113 YTADKGGDELDHLYVRELSG-EVTDLTPGDKLKAFFVGWHEDDNQFFVASNERDPKFFDV 171

Query: 374 GVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            + +  D S+E +   ++     + SP+G+ +  S+  + +  S LY  DLN +N
Sbjct: 172 YLYQANDYSRELVYQNNAGYSVESISPNGQYIALSKT-NSNADSDLYLADLNEKN 225



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 81/195 (41%), Gaps = 7/195 (3%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLT---PSRDQILFEPRFSPNQQKVAYATYDDED 235
           +++ S  +    + L + D +  N   +       D       F+P+ +++ Y+T +  +
Sbjct: 202 YIALSKTNSNADSDLYLADLNEKNAVTVLITEHQGDIEHSAYTFTPDSKQLIYSTDEFGE 261

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             + +  D +         +   +     FS NG+  +I V  D    +  +DL++    
Sbjct: 262 FKQAWAYDLKTKNKSLNYASDWDVRFT-YFSENGRYQVIGVNADAQTKLQIIDLKTRLRL 320

Query: 296 RLTNTLFINISA-SYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPV 353
            L N    ++   ++S D+SQ+VF  + +     LYV +   +  KR++     +  +  
Sbjct: 321 ALPNLPGGDLRGVNFSADASQLVFYINSDTSPSNLYVHKLGSTGVKRLTNTGNPNILEDN 380

Query: 354 WSPQGDLIAFTKFSG 368
              +G+++ F  F G
Sbjct: 381 LV-EGEVVRFKSFDG 394



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 53/403 (13%), Positives = 120/403 (29%), Gaps = 48/403 (11%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKV- 65
           + +   + + +C  L+L+    P        +   S        A   F +    G  + 
Sbjct: 1   MIKLPPLIVTVCAGLLLLACSTPPKEFVKQSITEESKPLFQSYSAEEFFKTTTVFGSSIN 60

Query: 66  ----SEVVSKDLQRSDVFN----LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
               + ++S D   + +FN     +      Q   +       + W     + L T    
Sbjct: 61  SDASAVLISND--ETGIFNAFKMPLDGSPPIQLTHSTLESIYVKSWFPRDDRFLYTADKG 118

Query: 118 KEGKDRLRVE---FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            +  D L V      + D+    ++  K FF          H   +  + +       F 
Sbjct: 119 GDELDHLYVRELSGEVTDLTPGDKL--KAFFVG-------WHEDDNQFFVASNERDPKFF 169

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
              L+      +      L   +  G ++  +             SPN Q +A +  +  
Sbjct: 170 DVYLY-----QANDYSRELVYQNNAGYSVESI-------------SPNGQYIALSKTNSN 211

Query: 235 DILRVYLMDT-RIDRAPKRIGNFRSMILAPR--FSSNGKRALISVQKDEAM-DIYSVDLQ 290
               +YL D    +     I   +  I      F+ + K+ + S  +       ++ DL+
Sbjct: 212 ADSDLYLADLNEKNAVTVLITEHQGDIEHSAYTFTPDSKQLIYSTDEFGEFKQAWAYDLK 271

Query: 291 SNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +   + L      ++  + +S +    V   + + + +L ++      +  +        
Sbjct: 272 TKN-KSLNYASDWDVRFTYFSENGRYQVIGVNADAQTKLQIIDLKTRLRLALPNLPGGDL 330

Query: 350 FDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSN 391
               +S     + F          + V K   +  + L    N
Sbjct: 331 RGVNFSADASQLVFYINSDTSPSNLYVHKLGSTGVKRLTNTGN 373



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 83/296 (28%), Gaps = 58/296 (19%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------------- 230
           M  DG+    LT S  + ++   + P   +  Y                           
Sbjct: 81  MPLDGSPPIQLTHSTLESIYVKSWFPRDDRFLYTADKGGDELDHLYVRELSGEVTDLTPG 140

Query: 231 ----------------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                                   D     VYL             N     +    S N
Sbjct: 141 DKLKAFFVGWHEDDNQFFVASNERDPKFFDVYLYQANDYSRELVYQNNAGYSVE-SISPN 199

Query: 269 GKRALIS-VQKDEAMDIYSVDLQSNAT--ERLTNTLF-INISA-SYSPDSSQIVFESDRE 323
           G+   +S    +   D+Y  DL         +T     I  SA +++PDS Q+++ +D  
Sbjct: 200 GQYIALSKTNSNADSDLYLADLNEKNAVTVLITEHQGDIEHSAYTFTPDSKQLIYSTDEF 259

Query: 324 GK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           G+ +Q +       + K ++   +       +S  G        +  +  + ++      
Sbjct: 260 GEFKQAWAYDLKTKN-KSLNYASDWDVRFTYFSENGRYQVIGVNADAQTKLQIIDLKTRL 318

Query: 383 ERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
              L      +L+   +S     L+F    D  + S LY   L       +     
Sbjct: 319 RLALPNLPGGDLRGVNFSADASQLVFYINSD-TSPSNLYVHKLGSTGVKRLTNTGN 373



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 31/96 (32%), Gaps = 4/96 (4%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPS 400
             K  + F    +     +  +      F    M  DGS    L   +       +W P 
Sbjct: 48  FFKTTTVFGSSINSDASAVLISNDETGIFNAFKMPLDGSPPIQLTHSTLESIYVKSWFPR 107

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
               +++  K GD    LY  +L+G    L  TP  
Sbjct: 108 DDRFLYTADKGGDELDHLYVRELSGEVTDL--TPGD 141


>gi|325954097|ref|YP_004237757.1| peptidase S9 prolyl oligopeptidase [Weeksella virosa DSM 16922]
 gi|323436715|gb|ADX67179.1| peptidase S9 prolyl oligopeptidase [Weeksella virosa DSM 16922]
          Length = 626

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 82/214 (38%), Gaps = 23/214 (10%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--------D 279
           + T+++ +   V++ +  I +    + +         +S N  + L   +K         
Sbjct: 132 WDTWNNGEFTHVFVQNKGIKKDI--LADEPFSATEYIWSPNADKVLYVAKKKFGTDYALS 189

Query: 280 EAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFES-DREGKEQLY--VMQSNG 335
              DIY+ DL +  TE LT      + + S+S  +    F S + +G E     ++   G
Sbjct: 190 TNTDIYAYDLATGKTENLTEGKMGYDTAPSFSSQND-FAFLSMEHDGYEADKNDLIVRRG 248

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK--DGSQERLLV--EDSN 391
           + +  +++  + + F   WS  G  I F    G    +  +    D      +    D  
Sbjct: 249 NLEVNLTKHWDGTVFGYKWSGDGKKIYFNAPVGGTVQLFSVDVNFDTKNLPKITQITDGQ 308

Query: 392 LQAPTWS--PSGRSLIFSRKKDGDTGSKLYSIDL 423
               T       ++++   + D +  +++Y++DL
Sbjct: 309 FDIATLHEVVGNKAIV--SRTDFNHAAEIYTVDL 340



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 53/141 (37%), Gaps = 16/141 (11%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDR--------EGKEQLYVMQSNGSDQKRISQDKEAS 348
           L +  F      +SP++ ++++ + +             +Y         + +++ K   
Sbjct: 155 LADEPFSATEYIWSPNADKVLYVAKKKFGTDYALSTNTDIYAYDLATGKTENLTEGKMGY 214

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKK---DGSQERLLVE--DSNLQAPTWSPSGRS 403
              P +S Q D  AF     + +           G+ E  L +  D  +    WS  G+ 
Sbjct: 215 DTAPSFSSQNDF-AFLSMEHDGYEADKNDLIVRRGNLEVNLTKHWDGTVFGYKWSGDGKK 273

Query: 404 LIFSRKKDGDTGSKLYSIDLN 424
           + F+    G    +L+S+D+N
Sbjct: 274 IYFNAPVGGTV--QLFSVDVN 292


>gi|300769917|ref|ZP_07079796.1| prolyl oligopeptidase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762393|gb|EFK59210.1| prolyl oligopeptidase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 699

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 14/125 (11%)

Query: 264 RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSS 314
            +S + K  L   +K            DIY  DL S  T  LT  +   + + +YSP+  
Sbjct: 240 AWSPDSKAVLYVSKKKFGTDYAVSTNTDIYRYDLSSKQTTNLTEGMNGYDTNPTYSPNGQ 299

Query: 315 QIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            + + S         K  + +   + S +  ++   + +    +WS     I FT     
Sbjct: 300 MLTWLSMKTEGYEADKNDIVLFDKSSSQRLNLTAHWDGTVNSFIWSKDNRKIYFTAPVKG 359

Query: 370 KFAIG 374
              + 
Sbjct: 360 TVQLF 364



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 85/246 (34%), Gaps = 29/246 (11%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K  L   +  G     LT    ++    +FSP+ + + ++      +++ Y    R    
Sbjct: 122 KGQLWKKNISGGAATQLTKGELELENV-KFSPDGKHILFSQSV---LIKKYHSPDRYPDL 177

Query: 250 PKRIGNFRSMILAPRFSS--NGK--RALISVQKDEAMDIYSVDLQSNAT---ERLTNTLF 302
           PK        +    + +  NGK     ++   +  +    VDL  +      ++     
Sbjct: 178 PKSDAYVFDNLDYRHWDTFNNGKFNHPFVATYNNGVIGEP-VDLLQDEPYYSPQMPFGGA 236

Query: 303 INISASYSPDSSQIVFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +   ++SPDS  +++ S +             +Y    +      +++       +P +
Sbjct: 237 EDF--AWSPDSKAVLYVSKKKFGTDYAVSTNTDIYRYDLSSKQTTNLTEGMNGYDTNPTY 294

Query: 355 SPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFS 407
           SP G ++ +     E +      I +  K  SQ   L    D  + +  WS   R + F+
Sbjct: 295 SPNGQMLTWLSMKTEGYEADKNDIVLFDKSSSQRLNLTAHWDGTVNSFIWSKDNRKIYFT 354

Query: 408 RKKDGD 413
               G 
Sbjct: 355 APVKGT 360



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 19/190 (10%)

Query: 218 RFSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            +SP+ + V Y +       Y       +Y  D    +              P +S NG+
Sbjct: 240 AWSPDSKAVLYVSKKKFGTDYAVSTNTDIYRYDLSSKQTTNLTEGMNGYDTNPTYSPNGQ 299

Query: 271 RALISVQKDEAM-----DIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREG 324
                  K E       DI   D  S+    LT        S  +S D+ +I F +  +G
Sbjct: 300 MLTWLSMKTEGYEADKNDIVLFDKSSSQRLNLTAHWDGTVNSFIWSKDNRKIYFTAPVKG 359

Query: 325 KEQLYVM----QSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             QL+ +            +I Q    E      V      LI  +        +     
Sbjct: 360 TVQLFELTIPANLKTKAFPQIQQISSGEFDITGIVGQSDNALIVTSTKLTHAPEVYHYDL 419

Query: 379 DGSQERLLVE 388
              + + +  
Sbjct: 420 SKKELKPVTT 429



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/203 (12%), Positives = 68/203 (33%), Gaps = 11/203 (5%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMD 243
                +   D        LT   +     P +SPN Q + + +   E    D   + L D
Sbjct: 263 STNTDIYRYDLSSKQTTNLTEGMNGYDTNPTYSPNGQMLTWLSMKTEGYEADKNDIVLFD 322

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV----DLQSN---ATER 296
               +      ++   + +  +S + ++   +      + ++ +    +L++      ++
Sbjct: 323 KSSSQRLNLTAHWDGTVNSFIWSKDNRKIYFTAPVKGTVQLFELTIPANLKTKAFPQIQQ 382

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +++  F         D++ IV  +      ++Y    +  + K ++   +  Y     + 
Sbjct: 383 ISSGEFDITGIVGQSDNALIVTSTKLTHAPEVYHYDLSKKELKPVTTVNDELYAGIYTNK 442

Query: 357 QGDLIAFTKFSGEKFAIGVMKKD 379
               +  T    + F+  V   D
Sbjct: 443 VASRVTKTSDGKDLFSWVVYPPD 465



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 79/265 (29%), Gaps = 68/265 (25%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATE 295
             +        I      + A   +++GK  + +V +          +++SV +      
Sbjct: 38  HQSNTTALTPEILWKLGRVSAEGLTTDGKTLIYAVSQYNFEQNSSERNLFSVAVTGGKAI 97

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             +           + +   I        K QL+    +G    ++++  E    +  +S
Sbjct: 98  PFSQEKGGESVVHIAENGDVIYLL-----KGQLWKKNISGGAATQLTK-GELELENVKFS 151

Query: 356 PQGDLIAFTK----------------------------------FSGEKFA---IGVMKK 378
           P G  I F++                                  F+  KF    +     
Sbjct: 152 PDGKHILFSQSVLIKKYHSPDRYPDLPKSDAYVFDNLDYRHWDTFNNGKFNHPFVATYNN 211

Query: 379 D--GSQERLLVED---------SNLQAPTWSPSGRSLIFSRKKDGD------TGSKLYSI 421
              G    LL ++            +   WSP  +++++  KK         T + +Y  
Sbjct: 212 GVIGEPVDLLQDEPYYSPQMPFGGAEDFAWSPDSKAVLYVSKKKFGTDYAVSTNTDIYRY 271

Query: 422 DLNGRNETLIN--TPAYASDPQWVG 444
           DL+ +  T +      Y ++P +  
Sbjct: 272 DLSSKQTTNLTEGMNGYDTNPTYSP 296


>gi|94496361|ref|ZP_01302938.1| dipeptidyl aminopeptidase [Sphingomonas sp. SKA58]
 gi|94424107|gb|EAT09131.1| dipeptidyl aminopeptidase [Sphingomonas sp. SKA58]
          Length = 742

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 53/304 (17%), Positives = 96/304 (31%), Gaps = 89/304 (29%)

Query: 220 SPNQQKVAY--ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-------------- 263
           SP+   V       D+++ L ++ +DTR       + + ++   A               
Sbjct: 52  SPDGTLVTLLKPRADEKERLDLWAIDTRTGAERMLVDSKKTGSGAALSEAEKMQQERDRS 111

Query: 264 ----------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                      +S +GK  L+ V  D  + + ++D      +RLT+T    ++   SP  
Sbjct: 112 VAGSTGITSYDWSPDGKTILVPV--DGDLYLAALD---GKVKRLTDTPGGELNGVVSPKG 166

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQ 357
             + F   R+G      +Q  G  +++++Q    +    V                WSP 
Sbjct: 167 GFVSFV--RDGN---LFVQPIGGAERQVTQGASETVNWGVAEFVAQEEMDRRTGYWWSPD 221

Query: 358 GDLIAFTKFSGEKFAI------------------------------GVMKKDGSQERLLV 387
             +IA  +       I                               VMK DGS +  + 
Sbjct: 222 DKMIAVARVDESPVGIVTRTAIGGEGTTVYQQRYPAAGTPNAIVDLFVMKPDGSGQVQVD 281

Query: 388 EDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              N         WS  GR+L   R+        L ++D       ++ T    S   W+
Sbjct: 282 LGPNKDVYLARVDWSKDGRTLFVQRESRDQKRLDLLAVDPMTGKARIVLTEEAKS---WI 338

Query: 444 GFMD 447
              +
Sbjct: 339 NLSN 342



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 112/342 (32%), Gaps = 58/342 (16%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR- 218
           D   + +T   G   + ++      VS +   +L V    GA  +    + + + +    
Sbjct: 144 DGKVKRLTDTPGGELNGVVSPKGGFVSFVRDGNLFVQPIGGAERQVTQGASETVNWGVAE 203

Query: 219 --------------FSPNQQKVAYATYDD------------EDILRVYLMDTRIDRAPKR 252
                         +SP+ + +A A  D+             +   VY         P  
Sbjct: 204 FVAQEEMDRRTGYWWSPDDKMIAVARVDESPVGIVTRTAIGGEGTTVYQQRYPAAGTPNA 263

Query: 253 IGNFRSM----------ILAP---------RFSSNGKRALISV-QKDE-AMDIYSVDLQS 291
           I +   M           L P          +S +G+   +    +D+  +D+ +VD  +
Sbjct: 264 IVDLFVMKPDGSGQVQVDLGPNKDVYLARVDWSKDGRTLFVQRESRDQKRLDLLAVDPMT 323

Query: 292 NATE-RLTNT--LFINISASYSP--DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                 LT     +IN+S ++ P  D S  ++ S+R G   LY +   G     ++    
Sbjct: 324 GKARIVLTEEAKSWINLSNNFHPLRDGS-FLWWSERSGHGHLYRV--AGKKWTALTNGDW 380

Query: 347 ASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                        L+ FT  + +  +  + V          L+  +            S 
Sbjct: 381 EVRDVVGVDEDKGLVYFTGNRETPLEQQLYVASLATPSPARLLTSAGWWNDAVMDDAASR 440

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           +   +++ D   ++Y  D +G+    ++  A   D  +  ++
Sbjct: 441 VVVSRQNTDQPKQVYLADSDGKQLQWLSQNALTGDHPYAPYV 482



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 64/227 (28%), Gaps = 51/227 (22%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           I   P  + + +K+         + RV+         P+ +          + S +G   
Sbjct: 17  IQSAPAHAADSRKLT--------LERVFASPDLAGPQPRAL----------KLSPDGTLV 58

Query: 273 LI---SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +      + E +D++++D ++ A   L ++      A+ S                   
Sbjct: 59  TLLKPRADEKERLDLWAIDTRTGAERMLVDSKKTGSGAALSEAEKM-------------- 104

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                   ++  S           WSP G  I           + +   DG  +RL    
Sbjct: 105 ------QQERDRSVAGSTGITSYDWSPDGKTILV----PVDGDLYLAALDGKVKRLTDTP 154

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                   SP G  + F R         L+   + G    +    + 
Sbjct: 155 GGELNGVVSPKGGFVSFVRD------GNLFVQPIGGAERQVTQGASE 195


>gi|308272767|emb|CBX29371.1| hypothetical protein N47_J03520 [uncultured Desulfobacterium sp.]
          Length = 425

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 73/204 (35%), Gaps = 24/204 (11%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +++P+F P+   V                    DR  +++ +         +S++GK+  
Sbjct: 233 VWDPKFCPDDGSVTAPVRSSGKWFLAKDGQIFWDRKFEQLWHH-------VYSNDGKKIA 285

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             V         +VD  +      T    +   A +SPD  ++        K   + +  
Sbjct: 286 AIVAPQFGRWTIAVDGNTWD----TTFGEMVTDAVFSPDGKRVACLGKENNK---WTVAV 338

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +G+       D+    + PV+SP G  +A       ++ I V     + + +  + + + 
Sbjct: 339 DGNQ-----WDEYDMAWQPVFSPDGKNVAAKVEKNGRYTIVV-----NGKPIPEDFATVW 388

Query: 394 APTWSPSGRSLIFSRKKDGDTGSK 417
            P +SP    ++    + G   +K
Sbjct: 389 NPVFSPDSDRILIKTIETGQNENK 412



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 18/123 (14%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             +  DG        +  +++ +  FSP+ ++VA     + +   V +   + D      
Sbjct: 295 WTIAVDG---NTWDTTFGEMVTDAVFSPDGKRVA-CLGKENNKWTVAVDGNQWDEY---- 346

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                M   P FS +GK     V+K+    I          + +        +  +SPDS
Sbjct: 347 ----DMAWQPVFSPDGKNVAAKVEKNGRYTIVV------NGKPIPEDFATVWNPVFSPDS 396

Query: 314 SQI 316
            +I
Sbjct: 397 DRI 399



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 60/197 (30%), Gaps = 26/197 (13%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++ P+FSP+ +  A  +   E  L V                         FS++GK  +
Sbjct: 69  VWYPKFSPDGRLTALISDTGEWALAVDGETAEDKYD---------FAWDTHFSNDGKNIV 119

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              QK+        D+                  + S D  +          ++  +++ 
Sbjct: 120 YMAQKEGKYFAVLNDVPWEKV------FLNMTGLAVSNDGKRAAASVQTVAFKEADIVKF 173

Query: 334 NGSDQKR-----ISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLV 387
                       +  +   + +D ++SP G  +A   + +   + I +   DG       
Sbjct: 174 QEGCYSAVIDEIVWNNNFVNVWDIIFSPDGKRVAAGVRTTLYDYTIAI---DGVVWEKTF 230

Query: 388 EDSNLQAPTWSPSGRSL 404
               +  P + P   S+
Sbjct: 231 AS--VWDPKFCPDDGSV 245


>gi|75906743|ref|YP_321039.1| WD-40-like protein beta propeller repeat-containing protein
           [Anabaena variabilis ATCC 29413]
 gi|75700468|gb|ABA20144.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 186

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 3/137 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFE 319
           P  S NG+       ++    +   DLQ  +  R   L     I  S S S     IV+ 
Sbjct: 50  PALSGNGRFLAFISNRNGVHQLLVYDLQQQSFIRTPGLNRPETITESPSLSYTGRYIVYM 109

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +  +G+  + +        + I+        +P  SP G  + F   +  ++ I V+ + 
Sbjct: 110 TSDQGRPVVALYDRAIQQSQIITPTYRGWVRNPGISPDGRYVVFETAARGQWDIEVLDRG 169

Query: 380 GSQERLLVEDSNLQAPT 396
            + E  +   + +  P+
Sbjct: 170 PNIELDIPNGATVNQPS 186



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 6/147 (4%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           N+ +     + S +   + F S+R G  QL V         R       E     P  S 
Sbjct: 42  NSRYTEEQPALSGNGRFLAFISNRNGVHQLLVYDLQQQSFIRTPGLNRPETITESPSLSY 101

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  I +      +  + +  +   Q +++       ++ P  SP GR ++F     G  
Sbjct: 102 TGRYIVYMTSDQGRPVVALYDRAIQQSQIITPTYRGWVRNPGISPDGRYVVFETAARGQW 161

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQ 441
             ++  +D     E  I   A  + P 
Sbjct: 162 DIEV--LDRGPNIELDIPNGATVNQPS 186



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 44/119 (36%), Gaps = 2/119 (1%)

Query: 216 EPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +P  S N + +A+ +  +    L VY +  +       +    ++  +P  S  G+  + 
Sbjct: 49  QPALSGNGRFLAFISNRNGVHQLLVYDLQQQSFIRTPGLNRPETITESPSLSYTGRYIVY 108

Query: 275 SVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                    +   D     ++ +T        +   SPD   +VFE+   G+  + V+ 
Sbjct: 109 MTSDQGRPVVALYDRAIQQSQIITPTYRGWVRNPGISPDGRYVVFETAARGQWDIEVLD 167



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 1/82 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               + I   P  S   + + Y T D    + V L D  I ++      +R  +  P  S
Sbjct: 87  LNRPETITESPSLSYTGRYIVYMTSDQGRPV-VALYDRAIQQSQIITPTYRGWVRNPGIS 145

Query: 267 SNGKRALISVQKDEAMDIYSVD 288
            +G+  +         DI  +D
Sbjct: 146 PDGRYVVFETAARGQWDIEVLD 167



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 30/103 (29%), Gaps = 4/103 (3%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN----LQAPTW 397
           S +   +   P  S  G  +AF         + V              +      ++P+ 
Sbjct: 40  SLNSRYTEEQPALSGNGRFLAFISNRNGVHQLLVYDLQQQSFIRTPGLNRPETITESPSL 99

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           S +GR +++     G     LY   +            +  +P
Sbjct: 100 SYTGRYIVYMTSDQGRPVVALYDRAIQQSQIITPTYRGWVRNP 142


>gi|209527769|ref|ZP_03276263.1| FHA domain containing protein [Arthrospira maxima CS-328]
 gi|209491802|gb|EDZ92163.1| FHA domain containing protein [Arthrospira maxima CS-328]
          Length = 526

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 82/218 (37%), Gaps = 18/218 (8%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            SL  ++ + A+IR L    + +     FS + + +A A+ D      V L +       
Sbjct: 269 RSLWTLNPE-ADIRTLGGHSNSVRSV-AFSGDGKMLASASADK----TVKLWNLSNGEEI 322

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASY 309
           +     RS + A  FS +G+    S  +D+ + ++  D+ +    + L        + ++
Sbjct: 323 RTFEGHRSGVNAVAFSPDGQIIA-SGSQDKTIKLW--DINTGEEIQSLAGHKMAVNAIAF 379

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +P+   I       G + + +       +         +      SP  ++IA       
Sbjct: 380 APNGEIIA---SGGGDKTVKLWSRETGLETLNISGHRLAITALSISPNSEIIA---SGSG 433

Query: 370 KFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
              I + +    +E L +E     + A  +SP G+ LI
Sbjct: 434 DKTIKLWQVKTGEEILTIEGGKTAINALMFSPDGKILI 471



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 76/203 (37%), Gaps = 15/203 (7%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +Q K+      +       L     +   + +G   + + +  FS +GK    S   D+ 
Sbjct: 252 SQSKIFGIQAGEISAPGRSLWTLNPEADIRTLGGHSNSVRSVAFSGDGKMLA-SASADKT 310

Query: 282 MDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + ++  +L +    R        ++A ++SPD   I   S     + + +   N  ++ +
Sbjct: 311 VKLW--NLSNGEEIRTFEGHRSGVNAVAFSPDGQIIASGSQ---DKTIKLWDINTGEEIQ 365

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWS 398
                + +     ++P G++IA     G    + +  ++   E L +      + A + S
Sbjct: 366 SLAGHKMAVNAIAFAPNGEIIA---SGGGDKTVKLWSRETGLETLNISGHRLAITALSIS 422

Query: 399 PSGRSLIFSRKKDGDTGSKLYSI 421
           P+   +       GD   KL+ +
Sbjct: 423 PNSEIIA---SGSGDKTIKLWQV 442



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/283 (15%), Positives = 82/283 (28%), Gaps = 45/283 (15%)

Query: 101 QDWNSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKI 154
            D  +LG        V   G  ++          +LW++ + ++I  + F    +    +
Sbjct: 278 ADIRTLGGHSNSVRSVAFSGDGKMLASASADKTVKLWNLSNGEEI--RTFEGHRSGVNAV 335

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           A +    I                       SG    ++ + D +              +
Sbjct: 336 AFSPDGQII---------------------ASGSQDKTIKLWDINTGEEIQSLAGHKMAV 374

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               F+PN + +A           V L           I   R  I A   S N    + 
Sbjct: 375 NAIAFAPNGEIIA----SGGGDKTVKLWSRETGLETLNISGHRLAITALSISPN-SEIIA 429

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGKEQLYVM 331
           S   D+ + ++ V  ++     LT       IN    +SPD   ++   D    + + V 
Sbjct: 430 SGSGDKTIKLWQV--KTGEEI-LTIEGGKTAINA-LMFSPDGKILIAGID---DKTVKVW 482

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           Q     + R              SP G  +A +     +  I 
Sbjct: 483 QWETQTEIRTISGYSWQVGAIAISPDGQNLA-SGSEDNQIKIW 524



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 73/218 (33%), Gaps = 30/218 (13%)

Query: 90  KITNPDSIPRFQDWNSLGAQVLVT---GRVIKEGKDRLRVEFRLWDVKDR---KQIIGKK 143
            ++N + I  F+   S G   +     G++I  G     +  +LWD+      + + G K
Sbjct: 315 NLSNGEEIRTFEGHRS-GVNAVAFSPDGQIIASGSQDKTI--KLWDINTGEEIQSLAGHK 371

Query: 144 FFSSPASWRKIAHTIS----DDIYQSITGEKGDFNS-----RILFVSESVV-------SG 187
              +  ++      I+    D   +  + E G         R+   + S+        SG
Sbjct: 372 MAVNAIAFAPNGEIIASGGGDKTVKLWSRETGLETLNISGHRLAITALSISPNSEIIASG 431

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               ++ +                  +    FSP+  K+  A  DD+    V +      
Sbjct: 432 SGDKTIKLWQVKTGEEILTIEGGKTAINALMFSPDG-KILIAGIDDK---TVKVWQWETQ 487

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
              + I  +   + A   S +G+    S  +D  + I+
Sbjct: 488 TEIRTISGYSWQVGAIAISPDGQNLA-SGSEDNQIKIW 524


>gi|119469696|ref|ZP_01612565.1| hypothetical protein ATW7_15839 [Alteromonadales bacterium TW-7]
 gi|119446943|gb|EAW28214.1| hypothetical protein ATW7_15839 [Alteromonadales bacterium TW-7]
          Length = 941

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 79/246 (32%), Gaps = 21/246 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           AN +++       L+   +S  +  +         +  ++  +       +++  F  + 
Sbjct: 373 ANPQWV---NSTTLYFNAYSTEESGI------YNRVSDIFSYNIETG-NVEKLTEFAGLR 422

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIV 317
                S +         +D   ++  VD+ +     L         +   + SPD+ ++V
Sbjct: 423 RFSATSDD-DTLYAEQIRDGYSELVKVDINTGTITPLFKKSLNTAYDY-PTLSPDNKKLV 480

Query: 318 FESDR-EGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + S       Q+Y+   +G   + +   +       P +S  G+ I F     +   I  
Sbjct: 481 YLSASLNENWQMYIQDVDGGISQPVPMPNGYQYLTQPSFSDNGESIYFVAGLNKTTDIYN 540

Query: 376 MKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                +  + L      +  P        L  S   DG     L + ++     T+ +  
Sbjct: 541 YHIASNTLKRLTHGQEAVAHPIEMQDETLLYLSINADGPDIKSLANTNI---KTTVTDLA 597

Query: 435 AYASDP 440
           A +  P
Sbjct: 598 ANSKAP 603



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 58/153 (37%), Gaps = 18/153 (11%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           A  R+ + T  DD   +     G      + ++   ++ + K SL     D         
Sbjct: 419 AGLRRFSATSDDDTLYAEQIRDGYSELVKVDINTGTITPLFKKSLNTA-YD--------- 468

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSS 267
                   P  SP+ +K+ Y +    +  ++Y+ D       P  + N    +  P FS 
Sbjct: 469 -------YPTLSPDNKKLVYLSASLNENWQMYIQDVDGGISQPVPMPNGYQYLTQPSFSD 521

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           NG+        ++  DIY+  + SN  +RLT+ 
Sbjct: 522 NGESIYFVAGLNKTTDIYNYHIASNTLKRLTHG 554


>gi|110637965|ref|YP_678172.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC
           33406]
 gi|110280646|gb|ABG58832.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC
           33406]
          Length = 641

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 46/280 (16%), Positives = 93/280 (33%), Gaps = 50/280 (17%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDED------------ILRVYLMDTRIDR------AP 250
           +     + P  S ++  + Y +                    +Y+ + + +         
Sbjct: 167 NSAYPDYNPAISVDESTIIYTSRRPNSTGGLISEMDGHYFEDIYMSNKQTNNSWGTSIQI 226

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA-- 307
            +  N  S       SS G+  ++  + D   D+Y  +L      + ++    IN     
Sbjct: 227 DQTINTTSHDACVGLSSEGQTMIV-YKDDGGGDLYYSNLSGQNWSKPISFGKAINTDGWE 285

Query: 308 ---SYSPDSSQIVFESDRE---GKEQLY--VMQSNGSDQKRISQDKEASYFDPVWSP--- 356
              ++SPD + + F S+++   G   +Y  V  + G     ++   E +  +  +SP   
Sbjct: 286 ACGNFSPDGNYLFFVSNKKGGFGGTDIYYAVKNAAGVWGAPVNMGPEINTKEDEFSPYLH 345

Query: 357 -QGDLIAFTKFSG---EKFAIGVMKKDGSQERLLVED------------SNLQAPTWSPS 400
             G    F+  +      F I     D S + + V+              +     WS  
Sbjct: 346 ADGKTFYFSSQAHTSMGGFDIFQSTIDLSMQPIAVKSKPENLGYPINTVGDEIYFVWSAD 405

Query: 401 GRSLIFSRKKDGDTGSK-LYSIDLNGRNETLINTPAYASD 439
            +   FS  ++G  G K LY ++       L+      SD
Sbjct: 406 NKRAYFSSAREGGLGDKDLYLLERPVAKAALVLLKGTISD 445


>gi|313677015|ref|YP_004055011.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312943713|gb|ADR22903.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 670

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/207 (19%), Positives = 69/207 (33%), Gaps = 38/207 (18%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAM------------DIYSVDLQSNAT-------E 295
           N       P   ++GK    +  +  +             DIYS  LQ            
Sbjct: 158 NSPQHDFTPALMADGKTLYFTSNRAGSTGGLKLDDGSFYEDIYSTTLQEGQWNKPQKLDR 217

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDP 352
            L N  + +  AS SP+   + F    +G   +Y      S     + +S    +++++ 
Sbjct: 218 NL-NGNYHDAVASVSPNGKTL-FVYSEKGNGDIYFSNFEDSTWTYPQALSSKINSTFWET 275

Query: 353 VWS--PQGDLIAFTKFSGEKF---AIG--VMKKDG--SQERLL----VEDSNLQAPTWSP 399
             S    G  + F+      +    I   +  +DG     R L      D++  AP   P
Sbjct: 276 SVSITADGQTLYFSSDRPGGYGGLDIYKSIKGEDGEWGSARNLGPTINTDASEDAPMIHP 335

Query: 400 SGRSLIFSRK-KDGDTGSKLYSIDLNG 425
            G +L FS     G  G  +Y   + G
Sbjct: 336 DGHTLYFSSSGHQGMGGYDIYYSKIEG 362



 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/250 (17%), Positives = 79/250 (31%), Gaps = 42/250 (16%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYD--------------DEDILRVYLMDTRIDRAPKR 252
           T +  Q  F P    + + + + +                 EDI    L + + ++  K 
Sbjct: 156 TVNSPQHDFTPALMADGKTLYFTSNRAGSTGGLKLDDGSFYEDIYSTTLQEGQWNKPQKL 215

Query: 253 IGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL------TNTLFIN 304
             N            S NGK       +    DIY  + + +            N+ F  
Sbjct: 216 DRNLNGNYHDAVASVSPNGKTL-FVYSEKGNGDIYFSNFEDSTWTYPQALSSKINSTFWE 274

Query: 305 ISASYSPDSSQIVFESDREGKEQ---LY--VMQSNG--SDQKRI--SQDKEASYFDPVWS 355
            S S + D   + F SDR G      +Y  +   +G     + +  + + +AS   P+  
Sbjct: 275 TSVSITADGQTLYFSSDRPGGYGGLDIYKSIKGEDGEWGSARNLGPTINTDASEDAPMIH 334

Query: 356 PQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLVEDS-------NLQAPTWSPSGRSLI 405
           P G  + F+         + I   K +G +    V          +      S   +   
Sbjct: 335 PDGHTLYFSSSGHQGMGGYDIYYSKIEGQEFMEPVNLGYPINTVYDDNYFVISADLKHAY 394

Query: 406 FSRKKDGDTG 415
           ++ +K G  G
Sbjct: 395 YASRKPGGLG 404


>gi|296100384|ref|YP_003610530.1| putative ATP/GTP-binding protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295054843|gb|ADF59581.1| putative ATP/GTP-binding protein [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 409

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 55/153 (35%), Gaps = 18/153 (11%)

Query: 280 EAMDIYSVDLQSNATERLTNT------LFINISASY---SPDSSQIVF-ESDREGKEQLY 329
              +            RLT T        +N+   +   +P  +QI F   D  G  QL+
Sbjct: 255 GTPETMPAPPAGVLQRRLTFTHQKAYPGLVNVPRHWVRSNPQGTQIAFLMRDDNGIVQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++   G + ++++  +        W P GD + F   +     I        +   L  D
Sbjct: 315 LISPEGGEPRQLTHTESGIQSAFNWHPSGDSLGFVLEN----RIACCDAQTGEVTFLTSD 370

Query: 390 SNL----QAPTWSPSGRSLIFSRKKDGDTGSKL 418
                   A  +SP+GR++ +  +K+G     L
Sbjct: 371 HGNPPSADAVVFSPNGRAIAWMEEKEGFRQLWL 403



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   ++A+   DD  I++++L+        +       +  A  +  +G      ++   
Sbjct: 295 PQGTQIAFLMRDDNGIVQLWLISPEGGEPRQLTHTESGIQSAFNWHPSGDSLGFVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D Q+     LT+      SA    +SP+   I +  ++EG  QL++ 
Sbjct: 353 --RIACCDAQTGEVTFLTSDHGNPPSADAVVFSPNGRAIAWMEEKEGFRQLWLT 404



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 3/102 (2%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++  +G   R LT +   I     + P+   + +    +  I        
Sbjct: 305 RDDNGIVQLWLISPEGGEPRQLTHTESGIQSAFNWHPSGDSLGFVL--ENRIACCDAQTG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +       GN  S   A  FS NG+      +K+    ++ 
Sbjct: 363 EVTFLTSDHGNPPSAD-AVVFSPNGRAIAWMEEKEGFRQLWL 403


>gi|194367637|ref|YP_002030247.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Stenotrophomonas maltophilia R551-3]
 gi|194350441|gb|ACF53564.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Stenotrophomonas maltophilia R551-3]
          Length = 741

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 99/321 (30%), Gaps = 92/321 (28%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--- 263
            P     L +P+ +P+  +V++    D D  ++ L    I     R+    S ++ P   
Sbjct: 32  LPLSGPTLMKPKVAPDGSQVSFLRGKDSDRNQLDLWTYDIGSGQTRLL-VDSKVVLPGTE 90

Query: 264 ------------------------RFSSNGKRALISVQKDEAMDIYSVDLQSNA---TER 296
                                   ++S + +R L  +      ++Y  DL+        +
Sbjct: 91  TLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPL----GGELYLYDLKQQGQAAVRQ 146

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--- 353
           LT+       A  SP    + F   R     L+V+      Q ++++D   +  + V   
Sbjct: 147 LTHGEGFATDAKLSPKGGFVSFIRGR----NLWVIDLASGKQLQLTRDGSTTIGNGVAEF 202

Query: 354 -------------WSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVED----- 389
                        W+P    IAF +         +++ +   + D  ++R          
Sbjct: 203 VADEEMDRHTGYWWAPDDSAIAFARIDEAPVPVQKRYEVYADRTDVIEQRYPAAGDANVR 262

Query: 390 --------SNLQAPTWS---------------PSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                   +    P W                   + L F R+        L  + L+  
Sbjct: 263 VQLGVIAPAADAQPRWVDLGKEQDIYLARVDWRDAQHLSFQRQSRDQRQLDLVEVALDSN 322

Query: 427 NETLINTPAYASDPQWVGFMD 447
            + ++   A+ + P WV   +
Sbjct: 323 RQRVL---AHETSPTWVPLHN 340



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 52/365 (14%), Positives = 109/365 (29%), Gaps = 97/365 (26%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E  L+D+K + Q                         + +T  +G      L      VS
Sbjct: 130 ELYLYDLKQQGQ----------------------AAVRQLTHGEGFATDAKLSPKGGFVS 167

Query: 187 GIIKNSLCVMD----------RDGAN------IRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            I   +L V+D          RDG+         ++            ++P+   +A+A 
Sbjct: 168 FIRGRNLWVIDLASGKQLQLTRDGSTTIGNGVAEFVADEEMDRHTGYWWAPDDSAIAFAR 227

Query: 231 YDDEDIL----------------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR--A 272
            D+  +                 + Y      +   +      +    PR+   GK    
Sbjct: 228 IDEAPVPVQKRYEVYADRTDVIEQRYPAAGDANVRVQLGVIAPAADAQPRWVDLGKEQDI 287

Query: 273 LISVQKDEAMDIYSVDLQSNATERLT-----------NTLFINISASYSP--------DS 313
            ++          S   QS    +L              L    S ++ P        D 
Sbjct: 288 YLARVDWRDAQHLSFQRQSRDQRQLDLVEVALDSNRQRVLAHETSPTWVPLHNSLRFLDD 347

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-- 371
             +++ S+R G + LY + S G      +     ++      P  +L+A  + +G+ +  
Sbjct: 348 GSVLWSSERTGFQHLYRIDSKGKA----TALTHGNW------PVDELLAVDEKAGKAYFR 397

Query: 372 ---------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                     I  +   G + + L +   + + +++ +  S+      +  T  ++    
Sbjct: 398 AGIETSRESQIYAVSLQGGEPQRLSKAPGMHSASFARN-ASVYVDSWSNSTTPPQIELFR 456

Query: 423 LNGRN 427
            NG  
Sbjct: 457 ANGEK 461


>gi|323344001|ref|ZP_08084227.1| dipeptidyl-peptidase IV [Prevotella oralis ATCC 33269]
 gi|323094730|gb|EFZ37305.1| dipeptidyl-peptidase IV [Prevotella oralis ATCC 33269]
          Length = 721

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 49/338 (14%), Positives = 105/338 (31%), Gaps = 60/338 (17%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR---- 218
           +Q  T     + +     +   ++ +  N L V  +DG + +  T     I++       
Sbjct: 132 WQMPTDGSAAWQAEAWNEASKALAYVKDNQLMVKTQDGDSTQLTTDGSRCIVYGQSVHRD 191

Query: 219 ---------FSPNQQKVAYATYDD-----------------------------EDILRVY 240
                    +SP+  K+A+   D                                 + V 
Sbjct: 192 EFGIRGGLFWSPDGTKLAFYRMDQTMVADYPQVDIFHRIALYEPDKYPMAGETSHKVTVM 251

Query: 241 LMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRA-LISVQKDEAM-DIYSVDLQSNA--- 293
           + D +            +        +S + K   +  + +D+    + S D ++     
Sbjct: 252 VYDLQSKNITTLQAGDPTDRYFTNVSWSPDSKTIYIFELNRDQNDCRLVSYDAKTGGKIA 311

Query: 294 -TERLTNTLFINISA--SYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
              R T+  ++      ++ P DS   + +S R+G   LY+  ++G  QK+++  K    
Sbjct: 312 ELNRETDDKYVEPQHPITFLPWDSKSFIMQSQRDGYNHLYLFSADGKLQKQLTSGKWVVL 371

Query: 350 FDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
               +  +   +          +     +     +  LL        P  SP+G      
Sbjct: 372 EMLGFDIKKKAVIIASNEKNPIQRNTYAVDIKTGKRTLLDNGHGYHYPNLSPTGAF-ACD 430

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
              +      +  I+      TL      A+DP W+G+
Sbjct: 431 NYSEPAVPRNIEIINTATAKHTLYF---KAADP-WLGY 464


>gi|302684513|ref|XP_003031937.1| hypothetical protein SCHCODRAFT_68234 [Schizophyllum commune H4-8]
 gi|300105630|gb|EFI97034.1| hypothetical protein SCHCODRAFT_68234 [Schizophyllum commune H4-8]
          Length = 920

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 90/245 (36%), Gaps = 23/245 (9%)

Query: 185 VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VSG    ++ + +   G  +       D I     FSP+  ++A A+ D    +RV  ++
Sbjct: 525 VSGSRDQTVRLWNAETGQPVGDPIWDDDHINCV-AFSPDSTRIATASDD--GTVRVLDVE 581

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTL 301
           TR+  A   +    S++    FS NG +  +S   D+ M  +  DL +       L    
Sbjct: 582 TRL-PAGDELRGHDSLVFCVAFSPNGTQ-FVSGSADDTMRFW--DLATGQQIGDALRGHG 637

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWS----P 356
               S S+S D   I       G     +   +    + + +      Y   VWS    P
Sbjct: 638 HGTSSVSFSSDGFSIA-----SGSPNGTIRFWDTRTLRPLQTWQALQGYQHCVWSVAFSP 692

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G L+             V   +   E L+     +++ ++SP GR ++       D   
Sbjct: 693 DGVLLVSGSSDKTIRLWDVKTGENVGEPLVGHTEWVRSVSFSPDGRFIV---SGSNDGTV 749

Query: 417 KLYSI 421
           +++ +
Sbjct: 750 RVWDV 754



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 62/399 (15%), Positives = 131/399 (32%), Gaps = 83/399 (20%)

Query: 64  KVSEVVSKDLQRSDVFN-----LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK 118
            + +VV  +L+ +D F       +S+    Q  +   S+    D   +    +  G +  
Sbjct: 214 DIRKVVEANLRGTDAFGLEQEWPLSEPLVIQAGSCIFSVAYSPDGKKI----VAGGNI-- 267

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
                     R+WD +  +Q +  +            H                + S + 
Sbjct: 268 ---------LRIWDAETGRQDVAMQ-----------GHA--------------GWVSSVA 293

Query: 179 FVSESVV--SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           F  +     SG    ++ + D   G             +    FSP+   V  A+ D   
Sbjct: 294 FSPDRSRIASGSRDFTVRLWDAKTGQQQGEALRGHTDWVRSVSFSPDGATVVSASDD--R 351

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            LR++      +      G+ RS+  +  FS +G R + S   D  + I+    ++   +
Sbjct: 352 TLRLWDAKAGKEIGEAMQGHTRSVN-SVVFSCDGARIV-SGANDGTVRIW----ETATRQ 405

Query: 296 RLTN------------TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +L +                  + ++S D+ ++V  S  +    L+   ++G       +
Sbjct: 406 QLGDSIRHTQVWASHGHTGWIHAVAFSLDNMRVV--SGGDDNTVLFWDVASGEQVGDDLR 463

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                     +SP G  IA   ++G      V + +  ++  +     + +   SP G+ 
Sbjct: 464 GHADGVSSVAFSPDGKHIASGSYAGTLRVWHVREVEKERDTTIGHTRAVTSVACSPDGKY 523

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           ++   +   D   +L++            T     DP W
Sbjct: 524 IVSGSR---DQTVRLWNA----------ETGQPVGDPIW 549



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 89/307 (28%), Gaps = 46/307 (14%)

Query: 112 VTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
               V      +  V        RLW+ +  + +                  I DD + +
Sbjct: 511 AVTSVACSPDGKYIVSGSRDQTVRLWNAETGQPV---------------GDPIWDDDHIN 555

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
                 D ++RI   S+     ++     +   D           D ++F   FSPN  +
Sbjct: 556 CVAFSPD-STRIATASDDGTVRVLDVETRLPAGD------ELRGHDSLVFCVAFSPNGTQ 608

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             + +   +D +R + + T         G+      +  FSS+G     S   +  +  +
Sbjct: 609 --FVSGSADDTMRFWDLATGQQIGDALRGHGHG-TSSVSFSSDGFSIA-SGSPNGTIRFW 664

Query: 286 SVDLQSNATERLTNTLFIN------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                +     L     +        S ++SPD   +V  S     + + +      +  
Sbjct: 665 ----DTRTLRPLQTWQALQGYQHCVWSVAFSPDGVLLVSGSS---DKTIRLWDVKTGENV 717

Query: 340 RISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                    +     +SP G  I      G      V  +      L   D  + +   +
Sbjct: 718 GEPLVGHTEWVRSVSFSPDGRFIVSGSNDGTVRVWDVQTRQQVGVTLQGHDGGVNSVALT 777

Query: 399 PSGRSLI 405
             G  ++
Sbjct: 778 SDGARIV 784


>gi|297163296|gb|ADI13008.1| WD40 repeat-domain-containing protein-like protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 1131

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 88/236 (37%), Gaps = 22/236 (9%)

Query: 206 LTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           L    + + + P RFSP+ +      +D      + L DT        +   R+ +L   
Sbjct: 446 LLARHEVMGYLPIRFSPDGRLALSGHWDG----VLRLWDTATRAQRLSVRGHRTQVLGVD 501

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIVFESDR 322
            + +G    +S  +D  +  +  DL++    R+  +           S D    V++   
Sbjct: 502 LTPDGSY-ALSTSRDGTVQFW--DLRAGRCTRVIRSAARATGCPVRLSADGRIGVWQ-GV 557

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPV---WSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +G+ Q++     G+ Q  + +  + +Y D      S  G  +   +  G +    +    
Sbjct: 558 DGRVQVWE-PRTGTCQWLLGEAFKGNYLDGSQYEVSADGRHVLTAEEDGAR----LWSVA 612

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
             + R+L   S   A  +SP GR +  +     D   +L+++  + +  TL     
Sbjct: 613 DGRCRVLAAGSATHALCFSPDGRMVAVA---GEDRVIRLWAVGDDQQVRTLRTLTG 665



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 49/166 (29%), Gaps = 11/166 (6%)

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            V + D       + + + +  +     S +G+  L    K   + I    L      RLT
Sbjct: 862  VRIWDLDSGACTRVLDDHQGRVGGVALSDDGRYVLCEGTKP--LAIIRRRLADGECRRLT 919

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                +  +  ++ D     F S   G   L     +  D+   +  +         S  G
Sbjct: 920  PDWDMRRTIRFTGDGRYAWFGS---GDGVLRRWDLDD-DRCVATIPRNGPVNVISTSADG 975

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSN-LQAPTWSPSGR 402
             L A    +G    + +   D     R        + +   S  GR
Sbjct: 976  RLAAVGDSNG---VVRLRDLDTGACLRTWTGPREPILSACLSADGR 1018



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 63/233 (27%), Gaps = 17/233 (7%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VSG    ++ + D D      +       +     S + +   Y   +    L +     
Sbjct: 854  VSGQSDGTVRIWDLDSGACTRVLDDHQGRVGGVALSDDGR---YVLCEGTKPLAIIRRRL 910

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                  +R+     M    RF+ +G+ A      D  +  + +D          N     
Sbjct: 911  ADGEC-RRLTPDWDMRRTIRFTGDGRYAWF-GSGDGVLRRWDLDDDRCVATIPRNGPVNV 968

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            IS   S D  ++    D  G  +L     +     R              S  G L   T
Sbjct: 969  IST--SADG-RLAAVGDSNGVVRLR--DLDTGACLRTWTGPREPILSACLSADGRLAMST 1023

Query: 365  KF----SGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKD 411
                    +   I +      Q           + A  ++P  R   FS   D
Sbjct: 1024 HQVMSSGAKDEPIRLWDAGAGQSVREFAGHEGWVSAVRFTPDARF-AFSAGHD 1075



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/111 (14%), Positives = 38/111 (34%), Gaps = 8/111 (7%)

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++      +G  +++    +     R+  D +        S  G  +       +  AI 
Sbjct: 851 RLAVSGQSDGTVRIW--DLDSGACTRVLDDHQGRVGGVALSDDGRYVL--CEGTKPLAII 906

Query: 375 VMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +    + R L  D ++ +   ++  GR   F     GD   + + +D +
Sbjct: 907 RRRLADGECRRLTPDWDMRRTIRFTGDGRYAWFGS---GDGVLRRWDLDDD 954


>gi|254521797|ref|ZP_05133852.1| peptidase, S9A/B/C family, catalytic domain protein
           [Stenotrophomonas sp. SKA14]
 gi|219719388|gb|EED37913.1| peptidase, S9A/B/C family, catalytic domain protein
           [Stenotrophomonas sp. SKA14]
          Length = 716

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 85/294 (28%), Gaps = 41/294 (13%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R +    S  ++Q+   +      ++    ++  SG + +SL V   D  N
Sbjct: 158 SYHVSPQDDRVL---FSAGVFQACASDLACTEKKLKDNKDAKASGKVFDSLFVRHWDTWN 214

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                  R+ +   P        +  A                 D   K           
Sbjct: 215 ----DGRRNTLFVAP--------LPAAKAGPVKGASALSATIDGDAPSKPF----GGNDD 258

Query: 263 PRFSSNGKRALISVQKDE-------AMDIYSVDLQSNA-TERLT-NTLFINISASYSPDS 313
             +S +G   + S++            D+Y  D         LT      +    +S D 
Sbjct: 259 FAWSPDGASVVASIRVAGKQEPWSTNFDLYRFDAAGKQAPVNLTAANPAWDAGPVFSADG 318

Query: 314 SQIV--------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             +         FE+DR G   L  M       + I+   + S      S  G  I  T 
Sbjct: 319 KTLFYRAMKRPGFEADRFG---LMAMDLASGKTREIAPQWDRSAGGITLSADGASIYTTA 375

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
               +  +  +     +   L+ D ++ A   +  G S+  +R         L 
Sbjct: 376 DDLGEHPLFQIDVASGKATKLIGDGSVTAVDVA--GNSVAITRNSLKSNDQVLV 427



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 91/260 (35%), Gaps = 42/260 (16%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYL------MDTRIDRAPKRIGNFRSMILAPRFSS 267
           +  P  + +   V +A    +  L+         + TR    PK+I      + +   S+
Sbjct: 60  VSAPVLTADGGTVVFAKRSVDANLKASTALFARNLLTRDAAPPKQITPAGWNVNSASLSA 119

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+       K  +  +Y+  L      +LT+      S   SP   +++F +   G  Q
Sbjct: 120 DGQTVYFLSGKSGSQQLYAQPLSGGTPRQLTDFAVDVDSYHVSPQDDRVLFSA---GVFQ 176

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKK----D 379
                   +++K +  +K+A     V+    D +    +     G +  + V        
Sbjct: 177 ACASDLACTEKK-LKDNKDAKASGKVF----DSLFVRHWDTWNDGRRNTLFVAPLPAAKA 231

Query: 380 G--SQERLLVEDSNLQAPT----------WSPSGRSLIFSRKKDGD-----TGSKLYSID 422
           G       L    +  AP+          WSP G S++ S +  G      T   LY  D
Sbjct: 232 GPVKGASALSATIDGDAPSKPFGGNDDFAWSPDGASVVASIRVAGKQEPWSTNFDLYRFD 291

Query: 423 LNGRNETLINTPAYASDPQW 442
             G+   +  T   A++P W
Sbjct: 292 AAGKQAPVNLT---AANPAW 308



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 54/152 (35%), Gaps = 17/152 (11%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQ-------LYVMQSNGSDQKR-ISQDKEASYFDPV 353
             N   ++SPD + +V      GK++       LY   + G      ++    A    PV
Sbjct: 254 GGNDDFAWSPDGASVVASIRVAGKQEPWSTNFDLYRFDAAGKQAPVNLTAANPAWDAGPV 313

Query: 354 WSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIF 406
           +S  G  + +       F  ++F +  M     + R +    +  A   T S  G S+  
Sbjct: 314 FSADGKTLFYRAMKRPGFEADRFGLMAMDLASGKTREIAPQWDRSAGGITLSADGASIYT 373

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +    G+    L+ ID+     T +      +
Sbjct: 374 TADDLGEHP--LFQIDVASGKATKLIGDGSVT 403


>gi|332670103|ref|YP_004453111.1| WD40-like beta Propeller containing protein [Cellulomonas fimi ATCC
           484]
 gi|332339141|gb|AEE45724.1| WD40-like beta Propeller containing protein [Cellulomonas fimi ATCC
           484]
          Length = 683

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 50/290 (17%), Positives = 94/290 (32%), Gaps = 35/290 (12%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +        S      L  +  DG ++  +  +R      P  SP+ + V +   +    
Sbjct: 26  VSVTRPDPRSDEYVGHLWRVPLDG-DVAAVPLTRGHRDTAPDVSPDGRWVVFCRAEPRGK 84

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATE 295
            +V++++      P ++ +      +PRFS +G      +   +E   +   D  S    
Sbjct: 85  PQVFVVE-ATGGEPVQLTDAPLGASSPRFSPDGSSVAYLARVPEEGRYVPDGDPASEPPR 143

Query: 296 RLTNTLFINISASYSPDSSQIVFESD---REGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +T   + +    +  D  Q +F  D           V  +      R   + +    D 
Sbjct: 144 HITGFQYRSDGLGFGVDRRQHLFVVDLPAVATDPDAPVTDAPAVPAARQLTEGDLDVRDA 203

Query: 353 VWSPQGDLI--AFTKFSGEKFAIG----VMKKDGSQERLL----VEDSNLQA-------- 394
            W P GD +  A  +       +     ++   G    L     V D++  A        
Sbjct: 204 RWLPSGDALVAAVARHGARDEDLRRDAVLVPVAGGPTGLTGLVPVTDADHGATLTVETVL 263

Query: 395 PTWSPSGRSLIFSRKKDGDTGSK-------LYSIDLNGRNETLINTPAYA 437
           PT  P G ++       G +G         L+ +DL+G       TP  A
Sbjct: 264 PT--PDGAAVWLLATDVGPSGRDFVAAHLGLFRVDLDGGEPGR--TPGRA 309



 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 56/126 (44%), Gaps = 11/126 (8%)

Query: 262 APRFSSNGKRALISVQKDE------AMDIYSVDLQSN-ATERLTNTLFINISASYSPDSS 314
           +P    +G  A++SV + +         ++ V L  + A   LT     + +   SPD  
Sbjct: 14  SPAVLPDGSAAVVSVTRPDPRSDEYVGHLWRVPLDGDVAAVPLTRG-HRDTAPDVSPDGR 72

Query: 315 QIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +VF  ++  GK Q++V+++ G +  +++ D       P +SP G  +A+     E+   
Sbjct: 73  WVVFCRAEPRGKPQVFVVEATGGEPVQLT-DAPLGASSPRFSPDGSSVAYLARVPEEGR- 130

Query: 374 GVMKKD 379
            V   D
Sbjct: 131 YVPDGD 136



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 50/139 (35%), Gaps = 12/139 (8%)

Query: 306 SASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S +  PD S  V    R      E    L+ +  +G D   +   +      P  SP G 
Sbjct: 14  SPAVLPDGSAAVVSVTRPDPRSDEYVGHLWRVPLDG-DVAAVPLTRGHRDTAPDVSPDGR 72

Query: 360 LIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSK 417
            + F +     K  + V++  G +   L +      +P +SP G S+ +  +   +    
Sbjct: 73  WVVFCRAEPRGKPQVFVVEATGGEPVQLTDAPLGASSPRFSPDGSSVAYLARVPEEGR-- 130

Query: 418 LYSIDLNGRNETLINTPAY 436
            Y  D +  +E   +   +
Sbjct: 131 -YVPDGDPASEPPRHITGF 148



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 63/212 (29%), Gaps = 10/212 (4%)

Query: 217 PRFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRA 272
           P   P+      +        D    +L    +D     +   R     AP  S +G+  
Sbjct: 15  PAVLPDGSAAVVSVTRPDPRSDEYVGHLWRVPLDGDVAAVPLTRGHRDTAPDVSPDGRWV 74

Query: 273 LIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV- 330
           +    +      ++ V+       +LT+      S  +SPD S + + +    + +    
Sbjct: 75  VFCRAEPRGKPQVFVVEATGGEPVQLTDAPLGASSPRFSPDGSSVAYLARVPEEGRYVPD 134

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLV 387
                   + I+  +  S        +   +                 D       R L 
Sbjct: 135 GDPASEPPRHITGFQYRSDGLGFGVDRRQHLFVVDLPAVATDPDAPVTDAPAVPAARQLT 194

Query: 388 EDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           E   +++   W PSG +L+ +  + G     L
Sbjct: 195 EGDLDVRDARWLPSGDALVAAVARHGARDEDL 226



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 36/103 (34%), Gaps = 9/103 (8%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERL-LVEDSNLQAPTWSPSGR 402
             P   P G     +    +         +  +  DG    + L       AP  SP GR
Sbjct: 13  GSPAVLPDGSAAVVSVTRPDPRSDEYVGHLWRVPLDGDVAAVPLTRGHRDTAPDVSPDGR 72

Query: 403 SLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQWVG 444
            ++F R +      +++ ++   G    L + P  AS P++  
Sbjct: 73  WVVFCRAEP-RGKPQVFVVEATGGEPVQLTDAPLGASSPRFSP 114


>gi|300719129|ref|YP_003743932.1| hypothetical protein [Erwinia billingiae Eb661]
 gi|299064965|emb|CAX62085.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 423

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 20/143 (13%)

Query: 295 ERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQD 344
            RLT T       +  +   +   SPD   I F   D  G  QL+ +   G + ++++Q 
Sbjct: 285 RRLTFTHQRAYPGLATAPRHWLRSSPDGRAIAFLMKDDAGVVQLWTVAPTGGEPRQVTQA 344

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL----QAPTWSPS 400
           K        W P G  +A    +    ++ +      + + L   ++      A   SP 
Sbjct: 345 KSDIQSAFSWHPNGRAVALINDN----SVMLCHVASGKLQRLTARTDDAPLADAVVCSPD 400

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL 423
           G  + + R  +G    +++ + +
Sbjct: 401 GLHVAYLRNVNG--WQQVFVVSV 421



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 48/130 (36%), Gaps = 12/130 (9%)

Query: 256 FRSMILAPR-F---SSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLF-INISASY 309
           +  +  APR +   S +G+     ++ D   + +++V        ++T     I  + S+
Sbjct: 295 YPGLATAPRHWLRSSPDGRAIAFLMKDDAGVVQLWTVAPTGGEPRQVTQAKSDIQSAFSW 354

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW--SPQGDLIAFTKFS 367
            P+   +   +D      + +        +R++   + +        SP G  +A+ +  
Sbjct: 355 HPNGRAVALINDNS----VMLCHVASGKLQRLTARTDDAPLADAVVCSPDGLHVAYLRNV 410

Query: 368 GEKFAIGVMK 377
                + V+ 
Sbjct: 411 NGWQQVFVVS 420



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 58/133 (43%), Gaps = 17/133 (12%)

Query: 212 QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFS 266
            +   PR     SP+ + +A+   DD  +++++ +       P+++   +S +  A  + 
Sbjct: 297 GLATAPRHWLRSSPDGRAIAFLMKDDAGVVQLWTVAP-TGGEPRQVTQAKSDIQSAFSWH 355

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----SYSPDSSQIVFESD 321
            NG+   +++  D ++ +    + S   +RLT     + +        SPD   + +  +
Sbjct: 356 PNGR--AVALINDNSVMLC--HVASGKLQRLTART--DDAPLADAVVCSPDGLHVAYLRN 409

Query: 322 REGKEQLYVMQSN 334
             G +Q++V+   
Sbjct: 410 VNGWQQVFVVSVG 422



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 36/98 (36%), Gaps = 3/98 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +   G   R +T ++  I     + PN + VA    +D  ++  ++   ++ R   
Sbjct: 327 QLWTVAPTGGEPRQVTQAKSDIQSAFSWHPNGRAVA--LINDNSVMLCHVASGKLQRLTA 384

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           R  +   +  A   S +G         +    ++ V +
Sbjct: 385 R-TDDAPLADAVVCSPDGLHVAYLRNVNGWQQVFVVSV 421


>gi|270001971|gb|EEZ98418.1| hypothetical protein TcasGA2_TC000886 [Tribolium castaneum]
          Length = 323

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 79/210 (37%), Gaps = 19/210 (9%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           L+   FSP+ + +   ++  +    + + +    +A + +      IL+  +S +GK   
Sbjct: 127 LWTVAFSPDDKYIISGSHAGK----ITVYNVETAKAEQTLDTRGKYILSIAYSPDGKYIA 182

Query: 274 ISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            S   D  ++I+  D+  N   + L        S  +SPDS  ++  SD +G  +LY   
Sbjct: 183 -SGAIDGIVNIF--DVAGNKLWQTLEGHAMPIRSLCFSPDSQLLLTASD-DGHMKLY--D 236

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
              ++         +      +SP G    F   S +K  + V +    Q     ++ N 
Sbjct: 237 VQHTNVVGTLSGHASWVVSVAFSPDGKY--FVSGSSDK-TVKVWELASKQCVHTFKEHND 293

Query: 393 --QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                 +SP    ++       D    +YS
Sbjct: 294 QVWGVRFSPDSTKIV---SVSEDKSINVYS 320



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 87/259 (33%), Gaps = 36/259 (13%)

Query: 111 LVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           +V+  V   G       L    R+WD++  K+I        P     +A +  D      
Sbjct: 85  VVSVAVSNNGKLCASSSLDSSMRIWDLERGKKIA--HVDVGPVELWTVAFSPDD------ 136

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                          + ++SG     + V + + A       +R + +    +SP+ + +
Sbjct: 137 ---------------KYIISGSHAGKITVYNVETAKAEQTLDTRGKYILSIAYSPDGKYI 181

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A    D      V + D   ++  + +      I +  FS +  + L++   D  M +Y 
Sbjct: 182 ASGAIDG----IVNIFDVAGNKLWQTLEGHAMPIRSLCFSPD-SQLLLTASDDGHMKLYD 236

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V   +N    L+      +S ++SPD    V  S     + + V +          ++  
Sbjct: 237 VQH-TNVVGTLSGHASWVVSVAFSPDGKYFVSGSS---DKTVKVWELASKQCVHTFKEHN 292

Query: 347 ASYFDPVWSPQGDLIAFTK 365
              +   +SP    I    
Sbjct: 293 DQVWGVRFSPDSTKIVSVS 311



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/103 (11%), Positives = 31/103 (30%), Gaps = 8/103 (7%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S + S +       S  +   +++        +           +   +SP    I   
Sbjct: 86  VSVAVSNNGKLCA-SSSLDSSMRIW--DLERGKKIAHVDVGPVELWTVAFSPDDKYIISG 142

Query: 365 KFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLI 405
             +G    I V   + ++           + +  +SP G+ + 
Sbjct: 143 SHAG---KITVYNVETAKAEQTLDTRGKYILSIAYSPDGKYIA 182


>gi|288550167|ref|ZP_05969506.2| hypothetical protein ENTCAN_08116 [Enterobacter cancerogenus ATCC
           35316]
 gi|288316005|gb|EFC54943.1| putative cytoplasmic protein [Enterobacter cancerogenus ATCC 35316]
          Length = 420

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 52/156 (33%), Gaps = 20/156 (12%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFI------NISASY---SPDSSQIVF-ESDREGKEQLY 329
              +         A  RLT T         N+   +   +P  SQI F   D  G  QL+
Sbjct: 269 GTPETLPAPPAGVAQRRLTFTHQNAYPGLVNVPRHWVRSNPQGSQIAFLMRDDNGIVQLW 328

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++   G + ++++  +        W P G+ + +   +     I            L  D
Sbjct: 329 LISPEGGEPRQLTHHESGIQSAFNWHPSGEKLGYVLEN----RIACCDAQTGAVTFLTSD 384

Query: 390 SNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   A  +SP G  + +  + DG    +L+  
Sbjct: 385 HGNPPSADAVVFSPDGHWIAWMEETDGFR--QLWVT 418



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   ++A+   DD  I++++L+        +   +   +  A  +  +G++    ++   
Sbjct: 309 PQGSQIAFLMRDDNGIVQLWLISPEGGEPRQLTHHESGIQSAFNWHPSGEKLGYVLEN-- 366

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D Q+ A   LT+      SA    +SPD   I +  + +G  QL+V 
Sbjct: 367 --RIACCDAQTGAVTFLTSDHGNPPSADAVVFSPDGHWIAWMEETDGFRQLWVT 418



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 31/102 (30%), Gaps = 3/102 (2%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++  +G   R LT     I     + P+ +K+ Y    +  I        
Sbjct: 319 RDDNGIVQLWLISPEGGEPRQLTHHESGIQSAFNWHPSGEKLGYVL--ENRIACCDAQTG 376

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +       GN  S   A  FS +G       + D    ++ 
Sbjct: 377 AVTFLTSDHGNPPSAD-AVVFSPDGHWIAWMEETDGFRQLWV 417


>gi|222479016|ref|YP_002565253.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halorubrum lacusprofundi ATCC 49239]
 gi|222451918|gb|ACM56183.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Halorubrum lacusprofundi ATCC 49239]
          Length = 628

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 44/188 (23%), Positives = 68/188 (36%), Gaps = 12/188 (6%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            NG R    +       ++S+D      E+ T           SP+ ++ VF  D  G E
Sbjct: 22  PNG-RLSFLLNTTGTGQVWSLDEPLGWPEQHTFFEESVSFVDSSPERAEAVFGMDEGGNE 80

Query: 327 --QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKD--G 380
             QLY++     +   ++   EA +    W  +GD  AF   +     F I V  +D  G
Sbjct: 81  RAQLYLLNYESGEITDLTDRPEAKHRWGGWDSEGDRFAFASNRRDTSVFDIYVQDRDAIG 140

Query: 381 SQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYAS 438
               L+ E     +   WSPS   LI   +        +Y++DL  G           A 
Sbjct: 141 GDAELVYEGDGWLSVAGWSPSDDRLI-VHEAHSSFDHDVYTLDLATGDLTHHTPHQRDAR 199

Query: 439 --DPQWVG 444
              P+W  
Sbjct: 200 YGSPEWGP 207



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 13/198 (6%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTL-FINIS 306
           P++   F   +     S     A+  + +       +Y ++ +S     LT+     +  
Sbjct: 48  PEQHTFFEESVSFVDSSPERAEAVFGMDEGGNERAQLYLLNYESGEITDLTDRPEAKHRW 107

Query: 307 ASYSPDSSQIVFESDR--EGKEQLYVMQSN--GSDQKRISQDKEASYFDPVWSP-QGDLI 361
             +  +  +  F S+R       +YV   +  G D + +  + +       WSP    LI
Sbjct: 108 GGWDSEGDRFAFASNRRDTSVFDIYVQDRDAIGGDAELV-YEGDGWLSVAGWSPSDDRLI 166

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                S     +  +               D+   +P W P G  L     +D DT  +L
Sbjct: 167 VHEAHSSFDHDVYTLDLATGDLTHHTPHQRDARYGSPEWGPEGEGLYLVTDRDSDT-LRL 225

Query: 419 YSIDLNGRNETLINTPAY 436
             +DL     +++ + A 
Sbjct: 226 ERLDLATGEFSVVASGAD 243


>gi|24373777|ref|NP_717820.1| peptidase, putative [Shewanella oneidensis MR-1]
 gi|24348163|gb|AAN55264.1|AE015664_7 peptidase, putative [Shewanella oneidensis MR-1]
          Length = 687

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 91/254 (35%), Gaps = 28/254 (11%)

Query: 220 SPNQQKVAY----ATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           S +  K+ Y         E    +YL+D T+ D  P ++ +         F+++ K    
Sbjct: 48  SHDGTKLVYGLKTVNDKGEASSDLYLLDLTQADAKPLQLTSAAGTEHDISFANDDKSIYF 107

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---EGKEQLYVM 331
              +  +  ++ + L     +++++          S D  QIV  S R   E K+     
Sbjct: 108 LASRSGSSQLFQLPLTGGEAQQVSDLPLDIDGYKLSNDGKQIV-LSMRVFPECKDLACSK 166

Query: 332 QSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERL 385
               ++++R S  +E           W        F      +    V+        E  
Sbjct: 167 DKFKAEEERKSTGREYKQLMVRHWDTWEDHARNHLFVGTLNGEKLTKVVDITQGLDTETP 226

Query: 386 LVEDSNLQAPTWSPSGRSLIFSR-----KKDGDTGSKLYSIDLNGRNETLIN-------- 432
               S ++  T++P G+ +++S       +   T   L+ + +NG   T +         
Sbjct: 227 PKPFSGMEEVTFTPDGQYVVYSAKAPSKDQAWTTNYDLWQVSVNGGKATNLTADNIAWDA 286

Query: 433 TPAYASDPQWVGFM 446
            P ++SD +++ ++
Sbjct: 287 QPTFSSDGRYMAYL 300



 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/293 (11%), Positives = 96/293 (32%), Gaps = 34/293 (11%)

Query: 175 SRILFVSESVV-SGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
           +++++  ++V   G   + L ++D   A+ + L   S      +  F+ + + + +    
Sbjct: 52  TKLVYGLKTVNDKGEASSDLYLLDLTQADAKPLQLTSAAGTEHDISFANDDKSIYFLASR 111

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-----------QKDEA 281
                             +++ +    I   + S++GK+ ++S+            KD+ 
Sbjct: 112 SGS--SQLFQLPLTGGEAQQVSDLPLDIDGYKLSNDGKQIVLSMRVFPECKDLACSKDKF 169

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
                        ++L      +    +   +   +F     G++   V+          
Sbjct: 170 KAEEERKSTGREYKQLM-VRHWDT---WEDHARNHLFVGTLNGEKLTKVVDITQGLDTET 225

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVEDSNLQA 394
                +   +  ++P G  + ++  +          + +  +  +G +   L  D+    
Sbjct: 226 PPKPFSGMEEVTFTPDGQYVVYSAKAPSKDQAWTTNYDLWQVSVNGGKATNLTADNIAWD 285

Query: 395 --PTWSPSGRSLIFSRKKDGDTGSKLYSI----DLNGRNETLINTPAYASDPQ 441
             PT+S  GR + +         +  Y I       G+++ +   P +   P 
Sbjct: 286 AQPTFSSDGRYMAYLAMTKPGFEADRYRIMLRDTSTGQSKEV--APLWDRSPS 336


>gi|158316034|ref|YP_001508542.1| WD-40 repeat-containing protein [Frankia sp. EAN1pec]
 gi|158111439|gb|ABW13636.1| WD-40 repeat protein [Frankia sp. EAN1pec]
          Length = 1424

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 59/348 (16%), Positives = 109/348 (31%), Gaps = 49/348 (14%)

Query: 111  LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
            +VTG V +           LW       +   +    PA  R  AH         +T   
Sbjct: 925  IVTGDVTRIATACEDGVVDLW------TLPSDRDADVPAPRRIAAH-------PGVTVRS 971

Query: 171  GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
              F+         + +    N + V + +G             +    +SP   +VA A+
Sbjct: 972  VRFSPG----GGRIATAGQDNIIKVFEIEGGVELRRMSGHTDQVRRVAWSPLGNRVASAS 1027

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--- 287
             D      + + D    R    +   R  +    +S+ G +  ISV  D    ++ +   
Sbjct: 1028 ADT----SIGVWDVHSGRRVLTLRGHRQGVCDVAWSAAGDQL-ISVSDDGTARVWKIGAV 1082

Query: 288  ---------DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                        +    R+T  + + ++A   P        S       + V++ +G+  
Sbjct: 1083 ETALVLVGAPASAMDRSRVTGEIAVAVAA--GP-------TSATGNSFDVVVLRPDGTRT 1133

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            + +S     +     WSP G  +             V   D + E  L     ++   WS
Sbjct: 1134 RTLSAAHRNTIRSVSWSPSGTRLLTASRDNTARIWRVDNVDYALENTLYAREGVEDARWS 1193

Query: 399  PSGRSLIFSRKKDGDTGSKLYSIDLN--GRNETLINTPAYASDPQWVG 444
            P G  L+ + +   D   + Y  D     R+E   + P +     W  
Sbjct: 1194 PDGVELVTAAR---DRVVRRYRADGEWLDRDERRPH-PNFLRAVAWHP 1237



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 82/236 (34%), Gaps = 16/236 (6%)

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
            +   +    +      + V+  DG   R L+ +    +    +SP+  ++  A+ D  + 
Sbjct: 1107 VAVAAGPTSATGNSFDVVVLRPDGTRTRTLSAAHRNTIRSVSWSPSGTRLLTASRD--NT 1164

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--SNAT 294
             R++ +D  +D A +     R  +   R+S +G   + +  +D  +  Y  D +      
Sbjct: 1165 ARIWRVDN-VDYALENTLYAREGVEDARWSPDGVELV-TAARDRVVRRYRADGEWLDRDE 1222

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             R         + ++ P   +    +      +   +  N ++        +       W
Sbjct: 1223 RR--PHPNFLRAVAWHPSRPEFALAA------EDNRLTINTAEATVDEHRTDKVLTSVAW 1274

Query: 355  SPQGDLIAFTKFSGEKFAIGVMK--KDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            SP G+ +A     G    +G       G   RL+  +  +    WS  G  ++ S 
Sbjct: 1275 SPTGEKLALGATDGTVLVLGAADGRIAGELHRLVGHEGEISTVDWSTDGERIVTSS 1330



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 55/158 (34%), Gaps = 9/158 (5%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               D++L    +SP  +K+A    D   +L +   D RI     R+      I    +S+
Sbjct: 1263 HRTDKVLTSVAWSPTGEKLALGATD-GTVLVLGAADGRIAGELHRLVGHEGEISTVDWST 1321

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ----IVFESDRE 323
            +G+R + +   D    ++           L       + A ++ D +     +V  +  +
Sbjct: 1322 DGERIV-TSSADHTASVWD-SHTGARLTSLVGHTGPVVGAVWAVDDASTTNMVVTTASAD 1379

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            G   +     +   +  +S   +    +P       LI
Sbjct: 1380 GT--IRTWDVSDIRRTPLSGLPDTEPGEPSAHATDQLI 1415



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 11/126 (8%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-----DRAPKRIGNFRSMILAP 263
            R   ++   +SP+  +VA  + D   ++R++ +              +I      + + 
Sbjct: 747 GRSAGMWGVAWSPDGSRVATGSRD--GVIRIWDLSAGDLVNAFAHGEDQIEQVDGWVRSV 804

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +S +      S   DE   ++S+D  +    R         +  +SP   Q V  +   
Sbjct: 805 AWSPSADLVA-SASTDETTRVWSLD--TGREVRSFRLPDRPWAVRFSPAGDQ-VLTACAS 860

Query: 324 GKEQLY 329
           G   L+
Sbjct: 861 GHAVLW 866



 Score = 37.7 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 44/127 (34%), Gaps = 19/127 (14%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           S    +  ++  ++     + ++     + A  +   WSP G  +A     G    I + 
Sbjct: 720 SLEGWRAAVHRAEAQLRSTRLLTDRSVGRSAGMWGVAWSPDGSRVATGSRDG---VIRIW 776

Query: 377 KKDGSQE---------RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                           ++   D  +++  WSPS   +  +     D  ++++S+D  GR 
Sbjct: 777 DLSAGDLVNAFAHGEDQIEQVDGWVRSVAWSPSADLVASAST---DETTRVWSLD-TGRE 832

Query: 428 ETLINTP 434
                 P
Sbjct: 833 VRSFRLP 839


>gi|291302656|ref|YP_003513934.1| serine/threonine protein kinase with WD40 repeats [Stackebrandtia
           nassauensis DSM 44728]
 gi|290571876|gb|ADD44841.1| serine/threonine protein kinase with WD40 repeats [Stackebrandtia
           nassauensis DSM 44728]
          Length = 687

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 57/340 (16%), Positives = 107/340 (31%), Gaps = 62/340 (18%)

Query: 107 GAQVLVTGRVIKEGKDRL----RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI 162
           G + L+ G         +        RLWDV+  K +            R+         
Sbjct: 361 GGEDLIHGFAFAPDGGTIATTGSAGIRLWDVRTGKTV------------REF-------- 400

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSP 221
                  +G     + F  +    G     + V D RDG  I  L  + + +     FSP
Sbjct: 401 -------RGGNAYCVTFSEDGTRLGAGTYPVRVWDARDGDEIAELEVNNEALELY--FSP 451

Query: 222 NQQKVAYATYDDEDIL-RVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALISVQKD 279
           N + V      + D +     ++       +RIG   R       FS +    +++    
Sbjct: 452 NGKAVITGPGSEGDGIGDGKGVELFDVDRGERIGELNRDAAQGMEFSPD-SELVVTSSNS 510

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                +     +    R T +      A ++PD   ++ +S       + +      D+ 
Sbjct: 511 GT---FLWSAATGKKVR-TISKEFGGRAVFTPDGRNLITDSMSG----VVMWDVASGDKV 562

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSN-----LQ 393
           R+           + SP G ++A          + +     G + R L  D        +
Sbjct: 563 RVISRSGG---AGLVSPDGKILA---SDDGVRIVHLWDLTSGDKIRTLELDGQFVMDAFK 616

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              +SP  R+L+      G +  +L+ +   G+  TL   
Sbjct: 617 NMAFSPDSRTLV-----TGISDVRLWPVKGTGKPRTLTTG 651



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 81/244 (33%), Gaps = 28/244 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           GA++   T   + ++    F+P+   +A           + L D R  +  +        
Sbjct: 352 GADVVIATDGGEDLIHGFAFAPDGGTIATT-----GSAGIRLWDVRTGKTVREFR--GGN 404

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF- 318
                FS +G R            +   D +              +   +SP+   ++  
Sbjct: 405 AYCVTFSEDGTRL-----GAGTYPVRVWDARDGDEIAELEVNNEALELYFSPNGKAVITG 459

Query: 319 -ESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             S+ +G    + + +   +  +  RI +    +     +SP  +L+  +  SG      
Sbjct: 460 PGSEGDGIGDGKGVELFDVDRGE--RIGELNRDAAQGMEFSPDSELVVTSSNSGT----F 513

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           +      ++   +         ++P GR+LI     D  +G  ++ +  +G    +I+  
Sbjct: 514 LWSAATGKKVRTISKEFGGRAVFTPDGRNLI----TDSMSGVVMWDV-ASGDKVRVISRS 568

Query: 435 AYAS 438
             A 
Sbjct: 569 GGAG 572



 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 56/178 (31%), Gaps = 22/178 (12%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFS 220
           + +     +F  R +F +    + I  +   V+  D   G  +R ++ S    L     S
Sbjct: 521 KKVRTISKEFGGRAVF-TPDGRNLITDSMSGVVMWDVASGDKVRVISRSGGAGLV----S 575

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRALISV 276
           P+ + +A     D+ +  V+L D       + +      ++       FS + +  +   
Sbjct: 576 PDGKILA----SDDGVRIVHLWDLTSGDKIRTLELDGQFVMDAFKNMAFSPDSRTLV--- 628

Query: 277 QKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                 D+    ++       LT          YS D   +   +        Y +  
Sbjct: 629 --TGISDVRLWPVKGTGKPRTLTTGYLPVHQVGYSRDGKTVAALAGDGSNGDEYSVNL 684


>gi|218247174|ref|YP_002372545.1| WD-40 repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|218167652|gb|ACK66389.1| WD-40 repeat protein [Cyanothece sp. PCC 8801]
          Length = 1016

 Score = 67.0 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 91/238 (38%), Gaps = 22/238 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ S     +  +   DG     L    +  ++   FSP+ Q++   ++D      + L
Sbjct: 463 QTLASASEDRTAKLWTLDGQKKATLL-GHENQVWTINFSPDGQRIVTGSFDT----TIKL 517

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D +  +  K +    + +++  FS N +  + S  +D  +  +S   + +    L +  
Sbjct: 518 WD-QTGQLLKTLEGHANWVMSVIFSRNSQEIV-SGGEDAMLKFWS--REGDLFASLLSPH 573

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S + S D+  +VF  D  GK  L+     G     I +   +      +SP G L+
Sbjct: 574 GDIGSINISADNQYLVFTGD-SGKMSLW---QQGGSVIEILRGHTSGVTGVHFSPDGQLM 629

Query: 362 AFTKFSGEKFAIGVMKKDGS--QERLLVE------DSNLQAPTWSPSGRSLIFSRKKD 411
           A    + +   +          + +  +E      +  L+   ++P G+ LI +   +
Sbjct: 630 ASVS-NDQTVKLWQFDPQAKRMELQQTLEYRKGEPEGGLKNVNFTPDGQYLITTSYDN 686



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 79/214 (36%), Gaps = 26/214 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A A+ D +       ++   +   +     + ++    FS + +  + S  +
Sbjct: 328 FSPDHRWIASASADTK-------VNLWKNNQRQTSLLHQGVVWRIGFSPDSQMMV-SASE 379

Query: 279 DEAMDIYSVDLQSN-ATERLTNTLFINISASY------SPDSSQIVFESDREGKEQLYVM 331
           D+ + ++ ++ Q N   ++         S ++      S    +I       G + L  +
Sbjct: 380 DKTVKLWQLNPQGNWTLKQTLIHPVPVRSVTFTFTDQCSQTGQKIA----SAGTDGLIRI 435

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            +     +R  Q    +  D   SP    +A +        +  +     +  LL  ++ 
Sbjct: 436 WNLEGKLQRTFQAHTGTINDLKISPNCQTLA-SASEDRTAKLWTLDGQ-KKATLLGHENQ 493

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +    +SP G+ ++       DT  KL+  D  G
Sbjct: 494 VWTINFSPDGQRIV---TGSFDTTIKLW--DQTG 522



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 91/263 (34%), Gaps = 34/263 (12%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R  +     +++   FSP+ Q +  A+ D    ++++ ++ + +   K+       + 
Sbjct: 350 NQRQTSLLHQGVVWRIGFSPDSQMMVSASED--KTVKLWQLNPQGNWTLKQTLIHPVPVR 407

Query: 262 APRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           +  F      S  G++   S   D  + I+  +L+                   SP+   
Sbjct: 408 SVTFTFTDQCSQTGQKIA-SAGTDGLIRIW--NLEGKLQRTFQAHTGTINDLKISPNCQT 464

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +   S+ +   +L+ +      +K      E   +   +SP G  I    F      I +
Sbjct: 465 LASASE-DRTAKLWTLD---GQKKATLLGHENQVWTINFSPDGQRIVTGSFDTT---IKL 517

Query: 376 MKKDGSQERLLVEDSNL-QAPTWSPSGRSLI---------FSRKKDG------DTGSKLY 419
             + G   + L   +N   +  +S + + ++         F  ++             + 
Sbjct: 518 WDQTGQLLKTLEGHANWVMSVIFSRNSQEIVSGGEDAMLKFWSREGDLFASLLSPHGDIG 577

Query: 420 SIDLNGRNETLINTPAYASDPQW 442
           SI+++  N+ L+ T        W
Sbjct: 578 SINISADNQYLVFTGDSGKMSLW 600



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 88/246 (35%), Gaps = 40/246 (16%)

Query: 218 RFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            F+P+ Q +   +YD+      V    T      + I    +++   R SS+GKR  ++ 
Sbjct: 671 NFTPDGQYLITTSYDNTLQSWNVKKALTHSSIQGEIIAKNNTVVNRFRISSDGKRLALA- 729

Query: 277 QKDEAMDIYSVD-------LQSNATERLTNTLFIN----ISASYSPDSSQIVFE------ 319
             D  + ++ +        L +N +  LTN   IN    I   Y P S+ + F       
Sbjct: 730 SADGTIKLWDLKSQKLLKILTTNQSPSLTNN-GINQCQKIQQGYPPQSTDVAFSKNNQYL 788

Query: 320 --SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGV 375
             S  +G  +L+ ++       +  +          +SP G L+A T      + +    
Sbjct: 789 VASYSDGCLKLWNLE---GQLIQEFRGHPQWINALRFSPDGQLLATTSRDNTIKLWQWEK 845

Query: 376 MKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            +    Q   +++          ++  G+ L        D   KL++I           +
Sbjct: 846 TQFKIDQPTKILKGHQDWVWNVAFTSDGKKLA---SGGKDNTVKLWNIT--------TQS 894

Query: 434 PAYASD 439
           P+  SD
Sbjct: 895 PSDQSD 900



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 15/192 (7%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD--FNSRILFVSESVV 185
            +LWD+K +K +       SP+      +     I Q    +  D  F+    ++  S  
Sbjct: 735 IKLWDLKSQKLLKILTTNQSPSLTNNGINQ-CQKIQQGYPPQSTDVAFSKNNQYLVASYS 793

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT- 244
            G +K    + + +G  I+       Q +   RFSP+ Q +A  + D+   L  +     
Sbjct: 794 DGCLK----LWNLEGQLIQE-FRGHPQWINALRFSPDGQLLATTSRDNTIKLWQWEKTQF 848

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----TERLTN 299
           +ID+  K +   +  +    F+S+GK+   S  KD  + ++++  QS +        L +
Sbjct: 849 KIDQPTKILKGHQDWVWNVAFTSDGKKLA-SGGKDNTVKLWNITTQSPSDQSDLIVTLQS 907

Query: 300 TLFINISASYSP 311
            +    S  +SP
Sbjct: 908 HIDWVTSVDFSP 919


>gi|119490072|ref|ZP_01622696.1| WD-repeat protein [Lyngbya sp. PCC 8106]
 gi|119454224|gb|EAW35376.1| WD-repeat protein [Lyngbya sp. PCC 8106]
          Length = 815

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 75/218 (34%), Gaps = 19/218 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +L       ++   FSP+++ +A  + D      V + D +         +   ++ +  
Sbjct: 612 FLPLEHQGTVWSVAFSPDERTIASGSGDR----SVRVWDRQTGYILFNFIDHTDIVYSVA 667

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           F++ G + + S  KD  + I  +DL++   +  L        S + + D +++V      
Sbjct: 668 FNTEGTKLV-SGSKDTTIKI--MDLETGIVQNTLEGHTDEVRSVAITYDGTKVV---SGG 721

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +   N                    SP   +IA          I +   +  + 
Sbjct: 722 YDDTVRIWDVNTGQLLNTLTGHTGDILAVAISPDNQVIASASKDRT---IKIWNLETGEL 778

Query: 384 RLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLY 419
              +     +    T+SP G+++        D   KL+
Sbjct: 779 LNTLSGHTNEVYTVTFSPDGKTIA---SGSKDRTIKLW 813



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/298 (15%), Positives = 96/298 (32%), Gaps = 37/298 (12%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           VK +++++ ++  +      +I + +++  Y+    E     ++IL  S   +       
Sbjct: 466 VKTQQRVLEQQKIT------RIENILAEGNYELCVNE----ATKILESSTQNIEIQKIQQ 515

Query: 193 LCVMDRDGANIRYL----TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            C   +DG N R +           +    FSP+ + +A  + D      V + D R   
Sbjct: 516 QC---KDGLNWRQVKVRDFAQHLGSVSAVAFSPDGRTIASGSRDQ----TVKVWDARTGA 568

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +      S I +  FS NG              I    L++              S +
Sbjct: 569 LLQNFSGDLSQITSVDFSPNGGEIA---AGSFYWRILEWSLETGELFLPLEHQGTVWSVA 625

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   I   S   G   + V             D     +   ++ +G  +       
Sbjct: 626 FSPDERTIASGS---GDRSVRVWDRQTGYILFNFIDHTDIVYSVAFNTEGTKLVSGSKDT 682

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWS--PSGRSLIFSRKKDG-DTGSKLYSIDL 423
               I +M  +    +  +E    +  + +    G  ++      G D   +++ ++ 
Sbjct: 683 T---IKIMDLETGIVQNTLEGHTDEVRSVAITYDGTKVV----SGGYDDTVRIWDVNT 733



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 65/183 (35%), Gaps = 13/183 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++ SG    S+ V DR    I +       I++   F+    K+   + D      + +
Sbjct: 631 RTIASGSGDRSVRVWDRQTGYILFNFIDHTDIVYSVAFNTEGTKLVSGSKDT----TIKI 686

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
           MD         +      + +   + +G + ++S   D+ + I+  D+ +      LT  
Sbjct: 687 MDLETGIVQNTLEGHTDEVRSVAITYDGTK-VVSGGYDDTVRIW--DVNTGQLLNTLTGH 743

Query: 301 LFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               ++ + SPD+  I   S DR     + +      +            +   +SP G 
Sbjct: 744 TGDILAVAISPDNQVIASASKDRT----IKIWNLETGELLNTLSGHTNEVYTVTFSPDGK 799

Query: 360 LIA 362
            IA
Sbjct: 800 TIA 802



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 40/109 (36%), Gaps = 5/109 (4%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I +    VVSG   +++ + D +   +          +     SP+ Q +A A+ D    
Sbjct: 710 ITYDGTKVVSGGYDDTVRIWDVNTGQLLNTLTGHTGDILAVAISPDNQVIASASKDR--- 766

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             + + +         +    + +    FS +GK    S  KD  + ++
Sbjct: 767 -TIKIWNLETGELLNTLSGHTNEVYTVTFSPDGKTIA-SGSKDRTIKLW 813


>gi|298243783|ref|ZP_06967590.1| WD40 domain protein beta Propeller [Ktedonobacter racemifer DSM
           44963]
 gi|297556837|gb|EFH90701.1| WD40 domain protein beta Propeller [Ktedonobacter racemifer DSM
           44963]
          Length = 421

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 89/261 (34%), Gaps = 65/261 (24%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L +    R  K++      +  P  S +GK+ +  +++ +  DI ++  +      + +
Sbjct: 83  NLYELDSQRNLKQLTQ-DLDVRDPAISPDGKQLIFVIRRGDYSDIATMPAEGGKINVIRS 141

Query: 300 TLFINIS--------------ASYSPDSSQIVFESDREG--------------KEQLYVM 331
                 +               S+S D   I+F SD                   Q++ +
Sbjct: 142 GQGSYYNVYGIVKSRANWIGQPSFSADGKSILFLSDLGKENWYQATKQDAPLLDPQVFTV 201

Query: 332 QSN--GSDQKR---ISQDKEASYFDPVWSPQG-DLIAFTKFSGEKFAI------------ 373
             +  G+D  +    S        D  + P   + I +T ++ +   I            
Sbjct: 202 PVSDPGTDTPQYVAYSDYGAGGDRDAAFRPSAPNEIVYTHYTYDPKNISNLLTQIYLADS 261

Query: 374 -------GVMKKDGSQER------LLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKL 418
                     +   ++ +      L  ED+N++   P +SP+G  + ++R ++      +
Sbjct: 262 TLIANNPYKYRPGTAKSQPDTGVALTPEDTNVRNYQPIFSPTGDYIAYTRSENTSDQLSI 321

Query: 419 YSIDLNGRNETLINTPAYASD 439
           Y   +    + +  TP  A+D
Sbjct: 322 YVQKV---PKGITATPGDAAD 339



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 51/317 (16%), Positives = 108/317 (34%), Gaps = 81/317 (25%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYD---------DEDILRVYLMDTRIDRAPKR 252
           N++ LT   D  + +P  SP+ +++ +               +  ++ ++ +        
Sbjct: 92  NLKQLTQDLD--VRDPAISPDGKQLIFVIRRGDYSDIATMPAEGGKINVIRSGQGSYYNV 149

Query: 253 IGNFRS---MILAPRFSSNGKRALISVQKDEA--------------MDIYSVDLQ--SNA 293
            G  +S    I  P FS++GK  L      +                 +++V +      
Sbjct: 150 YGIVKSRANWIGQPSFSADGKSILFLSDLGKENWYQATKQDAPLLDPQVFTVPVSDPGTD 209

Query: 294 TERLTN----TLFINISASYSPDS-SQIVFE-------SDREGKEQLYVMQS-------- 333
           T +           +  A++ P + ++IV+        +      Q+Y+  S        
Sbjct: 210 TPQYVAYSDYGAGGDRDAAFRPSAPNEIVYTHYTYDPKNISNLLTQIYLADSTLIANNPY 269

Query: 334 ----------NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMK---- 377
                       +      +D     + P++SP GD IA+T+     ++ +I V K    
Sbjct: 270 KYRPGTAKSQPDTGVALTPEDTNVRNYQPIFSPTGDYIAYTRSENTSDQLSIYVQKVPKG 329

Query: 378 --------------KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                               + +V+   +  P WSP G+SL +    +G     L  +++
Sbjct: 330 ITATPGDAADQQGIASYKSAQSIVKGQYVCQPVWSPDGKSLAYITYTNGAFDLWLAHLNV 389

Query: 424 NGR-NETLINTPAYASD 439
           + + N  L   P   +D
Sbjct: 390 DTKGNFKLTGNPIQLTD 406



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 55/145 (37%), Gaps = 27/145 (18%)

Query: 290 QSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +  T +   ++ IN    A +S    +  F  DR     LY + S   + K+++QD + 
Sbjct: 51  DTKQTTKDGTSIGINKTDQAVFS---GKFYFTIDR----NLYELDSQ-RNLKQLTQDLD- 101

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN---------------L 392
              DP  SP G  + F    G+   I  M  +G +  ++                    +
Sbjct: 102 -VRDPAISPDGKQLIFVIRRGDYSDIATMPAEGGKINVIRSGQGSYYNVYGIVKSRANWI 160

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSK 417
             P++S  G+S++F      +   +
Sbjct: 161 GQPSFSADGKSILFLSDLGKENWYQ 185



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 21/125 (16%)

Query: 214 LFEPRFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKR--------IGNFRSMIL--- 261
            ++P FSP    +AY  + +  D L +Y+                   I +++S      
Sbjct: 295 NYQPIFSPTGDYIAYTRSENTSDQLSIYVQKVPKGITATPGDAADQQGIASYKSAQSIVK 354

Query: 262 -----APRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTNTL--FINISASYSPD 312
                 P +S +GK        + A D++   +++ +    +LT       + +   + D
Sbjct: 355 GQYVCQPVWSPDGKSLAYITYTNGAFDLWLAHLNVDTKGNFKLTGNPIQLTDTNNKINAD 414

Query: 313 SSQIV 317
           S  I 
Sbjct: 415 SRPIW 419



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/127 (11%), Positives = 33/127 (25%), Gaps = 34/127 (26%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF----------------- 302
              P FS  G     +  ++ +  +          + +T T                   
Sbjct: 295 NYQPIFSPTGDYIAYTRSENTSDQLSIY--VQKVPKGITATPGDAADQQGIASYKSAQSI 352

Query: 303 ----INISASYSPDSSQIVFESDREGKEQLYVMQSN---------GSDQKRISQDKE--A 347
                     +SPD   + + +   G   L++   N           +  +++       
Sbjct: 353 VKGQYVCQPVWSPDGKSLAYITYTNGAFDLWLAHLNVDTKGNFKLTGNPIQLTDTNNKIN 412

Query: 348 SYFDPVW 354
           +   P+W
Sbjct: 413 ADSRPIW 419


>gi|254413072|ref|ZP_05026844.1| SMP-30/Gluconolaconase/LRE-like region family [Microcoleus
           chthonoplastes PCC 7420]
 gi|196180236|gb|EDX75228.1| SMP-30/Gluconolaconase/LRE-like region family [Microcoleus
           chthonoplastes PCC 7420]
          Length = 378

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 79/225 (35%), Gaps = 14/225 (6%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D I+Q         +  I     ++V+G +   + + D       Y     D   +    
Sbjct: 161 DYIHQFRDHTSNVLSLAITPDGRTLVTGALDG-IRLWDLTKQRRIYTLARFDNQTYGLAI 219

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            P+   +A           + L + +  ++  RI   R  + A  F+ +G+  + S   D
Sbjct: 220 HPDGDILA----SGHKFGSIKLWNLKTGQSLNRISAHRGSVNALAFTPDGQTLV-SGSYD 274

Query: 280 EAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             + I+  +L++    + L+       + + +PD   +   S R+G   + +      + 
Sbjct: 275 RTIKIW--NLRTGQLAQTLSGHTGRVWAVAINPDGETLASAS-RDG---VRLWNLRTGEL 328

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             +    +       +SP G L+A   F   +  I  +     +E
Sbjct: 329 LALLTAHDDWVHSVAFSPDGTLLATGGFD-RQIRIWQISPLSGEE 372



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 81/245 (33%), Gaps = 23/245 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E++VS    +++ + +    +  +        +     +P+ + +     D      + L
Sbjct: 141 ETLVSSGTDSAVNLWNWKTGDYIHQFRDHTSNVLSLAITPDGRTLVTGALDG-----IRL 195

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
            D    R    +  F +         +G   L S  K  ++ ++  +L++     R++  
Sbjct: 196 WDLTKQRRIYTLARFDNQTYGLAIHPDGD-ILASGHKFGSIKLW--NLKTGQSLNRISAH 252

Query: 301 LFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                + +++PD   +V  S DR     + +         +         +    +P G+
Sbjct: 253 RGSVNALAFTPDGQTLVSGSYDRT----IKIWNLRTGQLAQTLSGHTGRVWAVAINPDGE 308

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            +A     G    + +      +    L   D  + +  +SP G  L        D   +
Sbjct: 309 TLASASRDG----VRLWNLRTGELLALLTAHDDWVHSVAFSPDGTLLA---TGGFDRQIR 361

Query: 418 LYSID 422
           ++ I 
Sbjct: 362 IWQIS 366


>gi|119510305|ref|ZP_01629441.1| Serine/Threonine protein kinase with WD40 repeats [Nodularia
           spumigena CCY9414]
 gi|119465049|gb|EAW45950.1| Serine/Threonine protein kinase with WD40 repeats [Nodularia
           spumigena CCY9414]
          Length = 654

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/250 (13%), Positives = 82/250 (32%), Gaps = 25/250 (10%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++VSG    ++ + D     +          +     SP+   +A  + D+     + L
Sbjct: 420 RTLVSGSDDQTIKIWDLFTGELIRTLRGHSNSIQAIAISPDGATLASGSDDN----TIKL 475

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD----LQSNATERL 297
            +         +    S + +   S +G   + S   D+ + ++ ++    + +     L
Sbjct: 476 WNMSTGSLRSTLRGHTSWVRSLAISPDGITLV-SGSFDKTIKMWDLNKAVFIDT-----L 529

Query: 298 TNTLFINISASYSPDSSQIVFES-DREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +      S ++SPD   +   S D  G     + +       +     +   +     +
Sbjct: 530 NSDTQTVTSIAFSPDGMTLASASRDVYGGKLRTIKLWNLATKHKSHTLAENAQTVTSIAF 589

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP    +           I +      +E   LL     + +   SP G+SL+ + +   
Sbjct: 590 SPDNTTLVSGSRERT---IKLWNLATGKEMGTLLGHKDTVTSVAISPDGKSLVSASE--- 643

Query: 413 DTGSKLYSID 422
           D    ++ + 
Sbjct: 644 DNTIMIWRVS 653



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 75/246 (30%), Gaps = 16/246 (6%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +  ++G   S  +     + +   +  + V               +Q +     SP+ + 
Sbjct: 362 LQADQGLVLSVAISPDSQIFASSGERLIKVWHLGTGKEIATLKGHEQRVNVVAISPDGRT 421

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +   + D      + + D       + +    + I A   S +G     S   D  + ++
Sbjct: 422 LVSGSDDQ----TIKIWDLFTGELIRTLRGHSNSIQAIAISPDGATLA-SGSDDNTIKLW 476

Query: 286 SVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             ++ + +    L        S + SPD   +V  S     + + +   N +        
Sbjct: 477 --NMSTGSLRSTLRGHTSWVRSLAISPDGITLVSGSF---DKTIKMWDLNKAVFIDTLNS 531

Query: 345 KEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSP 399
              +     +SP G  +A        G+   I +           L      + +  +SP
Sbjct: 532 DTQTVTSIAFSPDGMTLASASRDVYGGKLRTIKLWNLATKHKSHTLAENAQTVTSIAFSP 591

Query: 400 SGRSLI 405
              +L+
Sbjct: 592 DNTTLV 597



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 88/266 (33%), Gaps = 36/266 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR +  G D   +  ++WD+   + I  +       S + IA  IS D            
Sbjct: 419 GRTLVSGSDDQTI--KIWDLFTGELI--RTLRGHSNSIQAIA--ISPD------------ 460

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    ++ SG   N++ + +    ++R         +     SP+   +   ++D 
Sbjct: 461 -------GATLASGSDDNTIKLWNMSTGSLRSTLRGHTSWVRSLAISPDGITLVSGSFDK 513

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + + D         + +    + +  FS +G     + +      + ++ L + A
Sbjct: 514 ----TIKMWDLNKAVFIDTLNSDTQTVTSIAFSPDGMTLASASRDVYGGKLRTIKLWNLA 569

Query: 294 TERLTNTLFIN----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           T+  ++TL  N     S ++SPD++ +V  S       + +       +       + + 
Sbjct: 570 TKHKSHTLAENAQTVTSIAFSPDNTTLVSGSRE---RTIKLWNLATGKEMGTLLGHKDTV 626

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGV 375
                SP G  +             V
Sbjct: 627 TSVAISPDGKSLVSASEDNTIMIWRV 652



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 55/163 (33%), Gaps = 14/163 (8%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D++ ++   ++  +   +      + +S + SPDS   +F S   G+  + V       +
Sbjct: 346 DQSPNLNLKNISLSKVLQ--ADQGLVLSVAISPDSQ--IFAS--SGERLIKVWHLGTGKE 399

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPT 396
               +  E        SP G  +           I +      +    +    +++QA  
Sbjct: 400 IATLKGHEQRVNVVAISPDGRTLVSGSDDQT---IKIWDLFTGELIRTLRGHSNSIQAIA 456

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            SP G +L        D   KL+++       TL    ++   
Sbjct: 457 ISPDGATLASGSD---DNTIKLWNMSTGSLRSTLRGHTSWVRS 496


>gi|145501963|ref|XP_001436961.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124404107|emb|CAK69564.1| unnamed protein product [Paramecium tetraurelia]
          Length = 442

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 74/226 (32%), Gaps = 30/226 (13%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-- 184
             RLWDVK  K  I             ++H     I    + E+  +      +S +   
Sbjct: 82  SIRLWDVKKGK--IKSIRRVKREGNPYVSHL---RILHQHSAEENFWKQISKLISHNNDV 136

Query: 185 ------------VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                       VSG    S+ ++D      +         +    FSP+   +A    D
Sbjct: 137 NSVCFSPKGTTIVSGSDDASIRLLDVMTRQQQGKLDGHSNYVISVCFSPDGATIASGNVD 196

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           +     + L D    +   ++      +    FS +GK    S   D ++ ++  D+++ 
Sbjct: 197 E----SIRLWDVMTGQQKAKLDGHEDCVYTVCFSPDGKTIA-SGSNDASIRLW--DVKTG 249

Query: 293 ATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             + +L +      S  +SPD + +   S     + + +       
Sbjct: 250 QQQAKLNDHSEAVYSIYFSPDGTTLASGSS---DKSILLWDVKTGQ 292



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 66/193 (34%), Gaps = 22/193 (11%)

Query: 237 LRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           LR+    +  +   K+I    +  + + +  FS  G   +      +   I  +D+ +  
Sbjct: 110 LRILHQHSAEENFWKQISKLISHNNDVNSVCFSPKGTTIV---SGSDDASIRLLDVMTRQ 166

Query: 294 TE-RLTNTLFINISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYF 350
            + +L       IS  +SPD + I       G   E + +       QK      E   +
Sbjct: 167 QQGKLDGHSNYVISVCFSPDGATIA-----SGNVDESIRLWDVMTGQQKAKLDGHEDCVY 221

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSR 408
              +SP G  IA          I +      Q++  + D +    +  +SP G +L    
Sbjct: 222 TVCFSPDGKTIASGSNDAS---IRLWDVKTGQQQAKLNDHSEAVYSIYFSPDGTTLA--- 275

Query: 409 KKDGDTGSKLYSI 421
               D    L+ +
Sbjct: 276 SGSSDKSILLWDV 288



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 64/180 (35%), Gaps = 32/180 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G  I  G D      RL DV  R+Q             +   H  S+ +        G  
Sbjct: 145 GTTIVSGSD--DASIRLLDVMTRQQ-----------QGKLDGH--SNYVISVCFSPDGA- 188

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    ++ SG +  S+ + D      +      +  ++   FSP+ + +A  + D 
Sbjct: 189 ---------TIASGNVDESIRLWDVMTGQQKAKLDGHEDCVYTVCFSPDGKTIASGSND- 238

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L D +  +   ++ +    + +  FS +G     S   D+++ ++  D+++  
Sbjct: 239 ---ASIRLWDVKTGQQQAKLNDHSEAVYSIYFSPDGTTLA-SGSSDKSILLW--DVKTGQ 292



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 45/146 (30%), Gaps = 31/146 (21%)

Query: 108 AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
           +  +++     +G       +    RLWDV   +Q                 H   D +Y
Sbjct: 175 SNYVISVCFSPDGATIASGNVDESIRLWDVMTGQQKAKLD-----------GHE--DCVY 221

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                  G          +++ SG    S+ + D      +       + ++   FSP+ 
Sbjct: 222 TVCFSPDG----------KTIASGSNDASIRLWDVKTGQQQAKLNDHSEAVYSIYFSPDG 271

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRA 249
             +A  + D      + L D +  + 
Sbjct: 272 TTLASGSSDK----SILLWDVKTGQY 293


>gi|75812414|ref|YP_320033.1| WD-40 repeat-containing serine/threonin protein kinase [Anabaena
           variabilis ATCC 29413]
 gi|75705170|gb|ABA24844.1| serine/threonine protein kinase with WD40 repeats [Anabaena
           variabilis ATCC 29413]
          Length = 682

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 78/271 (28%), Gaps = 34/271 (12%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS--------------- 165
                   ++W++   KQI          S   IA + +D I  S               
Sbjct: 376 SGSYDTTIKIWNLTTEKQIC--TLTGHTDSVLSIAISPNDKIIASGSSDKTIKLWNLVTM 433

Query: 166 ------ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
                 I   KG  +         + SG    ++ + +              Q +    F
Sbjct: 434 QQICTLIGHTKGISSVTFSLNRNILASGSYDTTIKLWNLTTKEEICTLIGHAQGISSIAF 493

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   +A  +YD      + L +         +      +L+  FS +GK  + S   D
Sbjct: 494 SPDGNILASGSYDT----TIKLWNLTTGEQINTLIGHSHFVLSVAFSPDGKTLV-SGCYD 548

Query: 280 EAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             + ++  DL +    R +T       S   SPD       S     E + +     + +
Sbjct: 549 ATIKLW--DLVTGKQTRTITGHGDSVTSVIISPDGETFASGSF---DETVILWDLVTAKE 603

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                    +     +S    +IA       
Sbjct: 604 IHRFYKHYNNVNSVAFSTNSKIIASGSDDNT 634



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 80/231 (34%), Gaps = 18/231 (7%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                +    FS +   V   +YD      + + +   ++    +      +L+   S N
Sbjct: 357 GHSNWVSSVTFSSDGNMVISGSYDT----TIKIWNLTTEKQICTLTGHTDSVLSIAISPN 412

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
             + + S   D+ + ++++         + +T  I  S ++S + + +   S       +
Sbjct: 413 -DKIIASGSSDKTIKLWNLVTMQQICTLIGHTKGI-SSVTFSLNRNILASGSY---DTTI 467

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLL 386
            +      ++               +SP G+++A   +      I +      ++   L+
Sbjct: 468 KLWNLTTKEEICTLIGHAQGISSIAFSPDGNILASGSYDTT---IKLWNLTTGEQINTLI 524

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                + +  +SP G++L+       D   KL+ + + G+    I     +
Sbjct: 525 GHSHFVLSVAFSPDGKTLVSGCY---DATIKLWDL-VTGKQTRTITGHGDS 571


>gi|119512107|ref|ZP_01631200.1| WD-40 repeat protein [Nodularia spumigena CCY9414]
 gi|119463265|gb|EAW44209.1| WD-40 repeat protein [Nodularia spumigena CCY9414]
          Length = 587

 Score = 67.0 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 20/206 (9%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           S +  +    +S + + +A A+ D      + +      +    +      + A   S N
Sbjct: 316 SHNGFVTSLTYSLDGRIIASASTDK----TIRIWGGYTRKHKLTLNGHTDTVYAVAMSPN 371

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
             + L+S  KD+ + I+  DL++      LT           SPD   ++  S       
Sbjct: 372 -CQILVSSSKDKTIRIW--DLETGRERCILTQDSAAKTV-IISPDGETLISGSK---DST 424

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +   +  +          +       P G  +A +   G    I +      +    +
Sbjct: 425 IKLWNLHTGELSCTLTGHTRAVLSLAIHPDGKTLASSSSDG---VIKLWNLQTGEVIQTL 481

Query: 388 EDSNLQAP-TWSPSGRSLIFSRKKDG 412
                 +P  +SP G++L+ S  + G
Sbjct: 482 TGF---SPVAFSPDGKTLL-SSARTG 503



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 63/214 (29%), Gaps = 23/214 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                        +     SP+ Q     + D      V L D    +           +
Sbjct: 218 WRCVQTLKGHSAAVNALAISPDGQTFISGSNDK----TVCLWDLNTGKCLYTFYGQAEAV 273

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--------NTLFINISASYSPD 312
           L+   S NGK+  IS   D  +  + +D         T        +      S +YS D
Sbjct: 274 LSVAISPNGKQI-ISGCVDRKISSWQLD---TKEYLRTFSYLNSPYSHNGFVTSLTYSLD 329

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              I   S     + + +        K        + +    SP    I  +    +   
Sbjct: 330 GRIIASAST---DKTIRIWGGYTRKHKLTLNGHTDTVYAVAMSPN-CQILVSSSKDKTIR 385

Query: 373 IGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLI 405
           I     +  +ER +L +DS  +    SP G +LI
Sbjct: 386 IW--DLETGRERCILTQDSAAKTVIISPDGETLI 417



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 56/156 (35%), Gaps = 14/156 (8%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS     ++ + D +    R +   +D        SP+ + +   + D      + L + 
Sbjct: 376 VSSSKDKTIRIWDLETGRERCILT-QDSAAKTVIISPDGETLISGSKDS----TIKLWNL 430

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
                   +      +L+     +GK    S   D  + ++  +LQ+    + LT    +
Sbjct: 431 HTGELSCTLTGHTRAVLSLAIHPDGKTLA-SSSSDGVIKLW--NLQTGEVIQTLTGFSPV 487

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               ++SPD   ++  S R G  +++    +   Q 
Sbjct: 488 ----AFSPDGKTLL-SSARTGAIKIWRQVQSDEKQP 518


>gi|288917388|ref|ZP_06411755.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Frankia sp. EUN1f]
 gi|288351253|gb|EFC85463.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Frankia sp. EUN1f]
          Length = 785

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 14/135 (10%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             S  PD + + F  DR G   L++ +S+G++  R+           +WSP G  IA   
Sbjct: 78  GPSPGPDGA-LAFVGDRTGTPALWIRESDGTE--RVVDTGPGQVRSVLWSPDGTWIALVV 134

Query: 366 FSGE--KFAIGVMKKDGSQERLL--------VEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             G   +  + V++ DG+    L         E S   A  W   GR L+ +        
Sbjct: 135 APGGGERTEVRVVQPDGTGLHQLAGGHPAGTAEPSAATAVRWLAGGRLLLVTESVRSGLT 194

Query: 416 SKLYSIDLNGRNETL 430
             L ++DL+G    L
Sbjct: 195 HAL-AVDLSGHRRHL 208



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 3/101 (2%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                S   P   P G  +AF        A+ + + DG++  +      +++  WSP G 
Sbjct: 70  WAAPPSVRGPSPGPDG-ALAFVGDRTGTPALWIRESDGTERVVDTGPGQVRSVLWSPDGT 128

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINT--PAYASDPQ 441
            +       G   +++  +  +G     +    PA  ++P 
Sbjct: 129 WIALVVAPGGGERTEVRVVQPDGTGLHQLAGGHPAGTAEPS 169



 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 36/134 (26%), Gaps = 14/134 (10%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +  P   P+   +A+            L     D   + +      + +  +S +G  
Sbjct: 74  PSVRGPSPGPDGA-LAFVGDRTGTPA---LWIRESDGTERVVDTGPGQVRSVLWSPDGTW 129

Query: 272 ALISVQKDEA--MDIYSVDLQSNATERL-------TNTLFINISASYSPDSS-QIVFESD 321
             + V        ++  V        +L       T       +  +       +V ES 
Sbjct: 130 IALVVAPGGGERTEVRVVQPDGTGLHQLAGGHPAGTAEPSAATAVRWLAGGRLLLVTESV 189

Query: 322 REGKEQLYVMQSNG 335
           R G      +  +G
Sbjct: 190 RSGLTHALAVDLSG 203


>gi|158312382|ref|YP_001504890.1| WD-40 repeat-containing protein [Frankia sp. EAN1pec]
 gi|158107787|gb|ABW09984.1| WD-40 repeat protein [Frankia sp. EAN1pec]
          Length = 461

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 86/211 (40%), Gaps = 13/211 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A  ++D    L           A + + +    I +  FS++G+    S  
Sbjct: 210 AFSPDGSLLAGGSWDGSIWLWDITDSGASKPAGRALTDDSGPIWSVAFSADGRTLA-SGS 268

Query: 278 KDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            D  + ++ +  ++   +  RL++ +    S ++S D+  +V  +       ++ M ++ 
Sbjct: 269 DDTTVRLWDMTNRARPWQFVRLSSDMEFVTSVAFSADNRLLV-AAGFSRTIAIWDM-ADR 326

Query: 336 SDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLV-EDS 390
              KR++Q     A+ +   +SP G L+A     G    + + V +      R L    +
Sbjct: 327 GAPKRLAQSLSTPATTYVAAFSPNGRLLATGSTDGLVRLWDLAVPEDPHPIGRPLTGHTN 386

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + +  +SP G +L        D   +L+ +
Sbjct: 387 RVWSLAFSPDGGTLA---SSGFDNSVRLWDV 414



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 88/248 (35%), Gaps = 19/248 (7%)

Query: 186 SGIIKNSLCVMDRD--GANIR--YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            G    S+ + D    GA+             ++   FS + + +A  + D    L    
Sbjct: 220 GGSWDGSIWLWDITDSGASKPAGRALTDDSGPIWSVAFSADGRTLASGSDDTTVRLWDMT 279

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--- 298
              R  +   R+ +    + +  FS++  R L++      + I+ +     A +RL    
Sbjct: 280 NRARPWQFV-RLSSDMEFVTSVAFSAD-NRLLVAAGFSRTIAIWDM-ADRGAPKRLAQSL 336

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLY--VMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T      A++SP+   +      +G  +L+   +  +     R         +   +SP
Sbjct: 337 STPATTYVAAFSPNGRLLA-TGSTDGLVRLWDLAVPEDPHPIGRPLTGHTNRVWSLAFSP 395

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            G  +A + F        V      +     L      + +  +SP+GR L  +     D
Sbjct: 396 DGGTLASSGFDNSVRLWDVTDLSNPEPIGAPLTGYQGWVLSVRFSPNGRVLASTSS---D 452

Query: 414 TGSKLYSI 421
           +  +L+S+
Sbjct: 453 STIRLWSL 460



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 58/159 (36%), Gaps = 5/159 (3%)

Query: 134 KDRKQIIGKKFFSSPASW----RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            D + ++   F  + A W    R     ++  +    T     F+     ++     G++
Sbjct: 304 ADNRLLVAAGFSRTIAIWDMADRGAPKRLAQSLSTPATTYVAAFSPNGRLLATGSTDGLV 363

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +     +  D   I          ++   FSP+   +A + +D+   L      +  +  
Sbjct: 364 RLWDLAVPEDPHPIGRPLTGHTNRVWSLAFSPDGGTLASSGFDNSVRLWDVTDLSNPEPI 423

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
              +  ++  +L+ RFS NG+    S   D  + ++S+ 
Sbjct: 424 GAPLTGYQGWVLSVRFSPNGRVLA-STSSDSTIRLWSLP 461



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 53/156 (33%), Gaps = 7/156 (4%)

Query: 173 FNSRILFVSESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQIL--FEPRFSPNQQKVA 227
           F + + F +++   V+     ++ + D  D    + L  S       +   FSPN + +A
Sbjct: 296 FVTSVAFSADNRLLVAAGFSRTIAIWDMADRGAPKRLAQSLSTPATTYVAAFSPNGRLLA 355

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D    L    +        + +    + + +  FS +G     S   +        
Sbjct: 356 TGSTDGLVRLWDLAVPEDPHPIGRPLTGHTNRVWSLAFSPDGGTLASSGFDNSVRLWDVT 415

Query: 288 DLQSNATE--RLTNTLFINISASYSPDSSQIVFESD 321
           DL +       LT      +S  +SP+   +   S 
Sbjct: 416 DLSNPEPIGAPLTGYQGWVLSVRFSPNGRVLASTSS 451


>gi|257060246|ref|YP_003138134.1| hypothetical protein Cyan8802_2429 [Cyanothece sp. PCC 8802]
 gi|256590412|gb|ACV01299.1| WD-40 repeat protein [Cyanothece sp. PCC 8802]
          Length = 1016

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 91/238 (38%), Gaps = 22/238 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ S     +  +   DG     L    +  ++   FSP+ Q++   ++D      + L
Sbjct: 463 QTLASASEDRTAKLWTLDGQKKATLL-GHENQVWTINFSPDGQRIVTGSFDT----TIKL 517

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D +  +  K +    + +++  FS N +  + S  +D  +  +S   + +    L +  
Sbjct: 518 WD-QTGQLLKTLEGHANWVMSVIFSRNSQEIV-SGGEDAMLKFWS--REGDLFASLLSPH 573

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S + S D+  +VF  D  GK  L+     G     I +   +      +SP G L+
Sbjct: 574 GDIGSINISADNQYLVFTGD-SGKMSLW---QQGGSVIEILRGHTSGVTGVHFSPDGQLM 629

Query: 362 AFTKFSGEKFAIGVMKKDGS--QERLLVE------DSNLQAPTWSPSGRSLIFSRKKD 411
           A    + +   +          + +  +E      +  L+   ++P G+ LI +   +
Sbjct: 630 ASVS-NDQTVKLWQFDPQAKRMELQQTLEYRKGEPEGGLKNVNFTPDGQYLITTSYDN 686



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 79/214 (36%), Gaps = 26/214 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A A+ D +       ++   +   +     + ++    FS + +  + S  +
Sbjct: 328 FSPDHRWIASASADTK-------VNLWKNNQRQTSLLHQGVVWRIGFSPDSQMMV-SASE 379

Query: 279 DEAMDIYSVDLQSN-ATERLTNTLFINISASY------SPDSSQIVFESDREGKEQLYVM 331
           D+ + ++ ++ Q N   ++         S ++      S    +I       G + L  +
Sbjct: 380 DKTVKLWQLNPQGNWTLKQTLIHPVPVRSVTFTFTDQCSQTGQKIA----SAGTDGLIRI 435

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            +     +R  Q    +  D   SP    +A +        +  +     +  LL  ++ 
Sbjct: 436 WNLEGKLQRTFQAHSGTINDLKISPNCQTLA-SASEDRTAKLWTLDGQ-KKATLLGHENQ 493

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +    +SP G+ ++       DT  KL+  D  G
Sbjct: 494 VWTINFSPDGQRIV---TGSFDTTIKLW--DQTG 522



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 83/230 (36%), Gaps = 32/230 (13%)

Query: 218 RFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            F+P+ Q +   +YD+      V    T      + I    +++   R SS+GKR  ++ 
Sbjct: 671 NFTPDGQYLITTSYDNTLQSWNVKKALTHSSIQGEIIAKNNTVVNRFRISSDGKRLALA- 729

Query: 277 QKDEAMDIYSVD-------LQSNATERLTNTLFIN----ISASYSPDSSQIVFE------ 319
             D  + ++ +        L +N +  LTN   IN    I   Y P S+ + F       
Sbjct: 730 SADGTIKLWDLKSQKLLKILTTNQSPSLTNN-GINQCQKIQQGYPPQSTDVAFSKNNQYL 788

Query: 320 --SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGV 375
             S  +G  +L+ ++       +  +          +SP G L+A T      + +    
Sbjct: 789 VASYSDGCLKLWNLE---GQLIQEFRGHPQWINALRFSPDGQLLATTSRDNTIKLWQWRK 845

Query: 376 MKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +    Q   +++          ++  G+ L        D   KL++I  
Sbjct: 846 TQFKIDQPTKILKGHQDWVWNVAFTSDGKKLA---SGGKDNTVKLWNITT 892



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 91/263 (34%), Gaps = 34/263 (12%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R  +     +++   FSP+ Q +  A+ D    ++++ ++ + +   K+       + 
Sbjct: 350 NQRQTSLLHQGVVWRIGFSPDSQMMVSASED--KTVKLWQLNPQGNWTLKQTLIHPVPVR 407

Query: 262 APRF------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           +  F      S  G++   S   D  + I+  +L+                   SP+   
Sbjct: 408 SVTFTFTDQCSQTGQKIA-SAGTDGLIRIW--NLEGKLQRTFQAHSGTINDLKISPNCQT 464

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +   S+ +   +L+ +      +K      E   +   +SP G  I    F      I +
Sbjct: 465 LASASE-DRTAKLWTLD---GQKKATLLGHENQVWTINFSPDGQRIVTGSFDTT---IKL 517

Query: 376 MKKDGSQERLLVEDSNL-QAPTWSPSGRSLI---------FSRKKDG------DTGSKLY 419
             + G   + L   +N   +  +S + + ++         F  ++             + 
Sbjct: 518 WDQTGQLLKTLEGHANWVMSVIFSRNSQEIVSGGEDAMLKFWSREGDLFASLLSPHGDIG 577

Query: 420 SIDLNGRNETLINTPAYASDPQW 442
           SI+++  N+ L+ T        W
Sbjct: 578 SINISADNQYLVFTGDSGKMSLW 600



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 79/192 (41%), Gaps = 15/192 (7%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD--FNSRILFVSESVV 185
            +LWD+K +K +       SP+      +     I Q    +  D  F+    ++  S  
Sbjct: 735 IKLWDLKSQKLLKILTTNQSPSLTNNGINQ-CQKIQQGYPPQSTDVAFSKNNQYLVASYS 793

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT- 244
            G +K    + + +G  I+       Q +   RFSP+ Q +A  + D+   L  +     
Sbjct: 794 DGCLK----LWNLEGQLIQE-FRGHPQWINALRFSPDGQLLATTSRDNTIKLWQWRKTQF 848

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----TERLTN 299
           +ID+  K +   +  +    F+S+GK+   S  KD  + ++++  QS +        L +
Sbjct: 849 KIDQPTKILKGHQDWVWNVAFTSDGKKLA-SGGKDNTVKLWNITTQSQSDQSDLIVTLQS 907

Query: 300 TLFINISASYSP 311
            +    S  +SP
Sbjct: 908 HIDWVTSVDFSP 919


>gi|42524795|ref|NP_970175.1| hypothetical protein Bd3438 [Bdellovibrio bacteriovorus HD100]
 gi|39577005|emb|CAE78234.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
          Length = 341

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 77/232 (33%), Gaps = 26/232 (11%)

Query: 216 EPRFSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            PRFS +  K+ Y +         ++Y MD   ++  +R+           +  +    L
Sbjct: 49  HPRFSEDNDKLIYTSRGRSSHKGSQIYEMDLAKNKE-RRVTFSDGDAFDAIY-ISASEIL 106

Query: 274 ISVQKDEA----------------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            S   DE                  D+Y  DL      RLT     +  + +   + +  
Sbjct: 107 YSSTTDEIKESPLLNKTFDKEYPPSDLYMSDLYGTEIVRLTQQPGYDGQSLFMTHALKPA 166

Query: 318 --FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAI 373
             F S R G   +Y +         IS +K+        SP    + + +        ++
Sbjct: 167 ILFTSRRGGLTGIYRLDLKNLPVSLISAEKDKEKRFATLSPDSKQLVWVEKDLKANTQSL 226

Query: 374 GVMKKDGSQERLL-VEDSNLQAPTWSPSG-RSLIFSRKKDGDTGSKLYSIDL 423
              K +     +L  ++   +   ++P     L +S  + GD   +L   DL
Sbjct: 227 VAFKLNEKIPVVLKSQEGEYRDLQFAPRSPARLFYSILRKGDKHWQLEVYDL 278



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 78/211 (36%), Gaps = 30/211 (14%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATE 295
           V   D  + +  K+I  F      PRFS +  + + + +     +   IY +DL  N   
Sbjct: 27  VLTPDYLLAKGSKQIT-FLGDNDHPRFSEDNDKLIYTSRGRSSHKGSQIYEMDLAKNKER 85

Query: 296 RLTNTLFINISASYSPDSSQIVFES---------------DREGKE-QLYVMQSNGSDQK 339
           R+T +      A Y   +S+I++ S               D+E     LY+    G++  
Sbjct: 86  RVTFSDGDAFDAIYI-SASEILYSSTTDEIKESPLLNKTFDKEYPPSDLYMSDLYGTEIV 144

Query: 340 RISQ----DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-- 393
           R++Q    D ++ +      P    I FT   G    I  +        L+  + + +  
Sbjct: 145 RLTQQPGYDGQSLFMTHALKP---AILFTSRRGGLTGIYRLDLKNLPVSLISAEKDKEKR 201

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             T SP  + L++  K        L +  LN
Sbjct: 202 FATLSPDSKQLVWVEKDLKANTQSLVAFKLN 232



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 25/61 (40%), Gaps = 2/61 (3%)

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETLIN-TPAYAS 438
              + +    +   P +S     LI++ + +    GS++Y +DL    E  +  +   A 
Sbjct: 36  KGSKQITFLGDNDHPRFSEDNDKLIYTSRGRSSHKGSQIYEMDLAKNKERRVTFSDGDAF 95

Query: 439 D 439
           D
Sbjct: 96  D 96


>gi|66807159|ref|XP_637302.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
 gi|74996742|sp|Q54KL5|WDR5_DICDI RecName: Full=WD repeat-containing protein 5 homolog
 gi|60465720|gb|EAL63798.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
          Length = 335

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 86/228 (37%), Gaps = 20/228 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           ++Y      + +   +FSP+ + +A A+ D      + +      +  + +   +  I  
Sbjct: 38  LKYTLKGHLKSISSVKFSPDGKWLASASADK----TIKIWGAYDGKFERTLEGHKEGISD 93

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
             +S +  + + S   D+ + I+  D++S    + L          S++P S+ IV  S 
Sbjct: 94  IAWSQD-SKLICSASDDKTIKIW--DVESGKMVKTLKGHKEYVFGVSFNPQSNLIVSGSF 150

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               E + +   N  +  ++            ++  G L+    + G    + +      
Sbjct: 151 ---DENVRIWDVNTGECTKMISAHSDPVTGVHFNRDGTLVVSGSYDGT---VRIWDTTTG 204

Query: 382 QERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           Q    +   + +  +   +SP+G+ ++       D   +L+S + N +
Sbjct: 205 QLLNTISTEDGKEVSFVKFSPNGKFVLAGTL---DNTLRLWSYNNNKK 249


>gi|308050827|ref|YP_003914393.1| dipeptidyl-peptidase IV [Ferrimonas balearica DSM 9799]
 gi|307633017|gb|ADN77319.1| dipeptidyl-peptidase IV [Ferrimonas balearica DSM 9799]
          Length = 750

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 63/192 (32%), Gaps = 47/192 (24%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---------------------- 255
            +SP+  +V Y    D D  R  L +  I     R+                        
Sbjct: 54  TYSPDGSRVTYLKGRDSDQHRYDLWEYHIGDNAHRLLVDADTLHQGDEALSDEEKARRER 113

Query: 256 ---FRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSP 311
              + S I+  R+S +G+  L  +  D    D+     +S    RLT T         SP
Sbjct: 114 QRIYGSGIMEYRWSDDGQALLFPLAGDVFFYDLAQASAESK-PRRLTETPGFETDIKVSP 172

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WS 355
               + F  D    + LYV+     +++ +++D   +  + +                WS
Sbjct: 173 KGGYVSFVRD----QNLYVVDLASGEERALTRDGGGAIKNGMAEFVAQEEMGRMTGYWWS 228

Query: 356 PQGDLIAFTKFS 367
           P    +AF +  
Sbjct: 229 PDDAHMAFIRVD 240



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 92/295 (31%), Gaps = 56/295 (18%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD----------RDGANI------RYLT 207
           + +T   G      +      VS +   +L V+D          RDG          ++ 
Sbjct: 156 RRLTETPGFETDIKVSPKGGYVSFVRDQNLYVVDLASGEERALTRDGGGAIKNGMAEFVA 215

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA---------------PKR 252
                 +    +SP+   +A+   D+  +  V   +   DR                  +
Sbjct: 216 QEEMGRMTGYWWSPDDAHMAFIRVDESPVDEVTRSEIYADRIDMIQQRYPAAGRPNVTVK 275

Query: 253 IGNFRSMILAPRFSSNGK-------RALIS----------VQKDEAMDIYSVDLQSNATE 295
           +G         R+   GK       R   +           +  + +++   D+++  T 
Sbjct: 276 LGVVALADGNVRWLDLGKQQDIYLPRVRWANANQLSYQWQSRDQQTLELRLADIKNGETR 335

Query: 296 RLTNTLFINI-----SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            L      +         +   + Q ++ S+R+G   LY+   NG   ++++        
Sbjct: 336 VLLTERSDSWINLHEDLRFLKSARQFIWASERDGFNHLYLYGMNGKPVRQLTSGTWVVDK 395

Query: 351 DPVWSPQGDLIAFTKFSGE--KFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGR 402
                 +  L+ FT       +  +  ++ DG  +   + +   + +  ++  G 
Sbjct: 396 LEAVDEEKGLVFFTGRRDTPLERHLYRVRLDGEGKITRISDRPGMHSIKFAKDGS 450



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 56/176 (31%), Gaps = 43/176 (24%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY--------------VMQSN 334
           L       LT          YSPD S++ +   R+  +  Y              ++ ++
Sbjct: 45  LAGATPRALT----------YSPDGSRVTYLKGRDSDQHRYDLWEYHIGDNAHRLLVDAD 94

Query: 335 G--------SDQKRISQDKEASYFDP----VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                    SD+++  ++++  Y        WS  G  + F       F         S+
Sbjct: 95  TLHQGDEALSDEEKARRERQRIYGSGIMEYRWSDDGQALLFPLAGDVFFYDLAQASAESK 154

Query: 383 ERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            R L E    +     SP G  + F R ++      LY +DL    E  +      
Sbjct: 155 PRRLTETPGFETDIKVSPKGGYVSFVRDQN------LYVVDLASGEERALTRDGGG 204



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 95/274 (34%), Gaps = 35/274 (12%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPR--FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           V   DG N+R+L   + Q ++ PR  ++ N  +++Y     +       +    +   + 
Sbjct: 279 VALADG-NVRWLDLGKQQDIYLPRVRWA-NANQLSYQWQSRDQQTLELRLADIKNGETRV 336

Query: 253 IGNFRSMIL-----APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +   RS          RF  + ++ + + ++D    +Y   +      +LT+  ++    
Sbjct: 337 LLTERSDSWINLHEDLRFLKSARQFIWASERDGFNHLYLYGMNGKPVRQLTSGTWVVDKL 396

Query: 308 SYSPDSSQIVFESDREGKE---QLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGD-LIA 362
               +   +VF + R        LY ++ +G     RIS           ++  G   I 
Sbjct: 397 EAVDEEKGLVFFTGRRDTPLERHLYRVRLDGEGKITRISDRP--GMHSIKFAKDGSGYID 454

Query: 363 FTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPT---W---------SPSGRSLIF 406
                     + +    G+Q   L    VE  +   P    W         +P G SL +
Sbjct: 455 TFSDPRTPPQVSLHDARGNQLTWLEQNRVEPGHPLFPYLSDWVNPEFGTLRAPQGHSLYY 514

Query: 407 SRKKD-GDTGSKLY--SIDLNGRNETLINTPAYA 437
              K  G   +K Y   + L G     + T ++ 
Sbjct: 515 RLYKPAGFDANKQYPAIVYLYGGPHAQLVTNSWD 548


>gi|119512734|ref|ZP_01631805.1| WD-40 repeat protein [Nodularia spumigena CCY9414]
 gi|119462602|gb|EAW43568.1| WD-40 repeat protein [Nodularia spumigena CCY9414]
          Length = 331

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 72/227 (31%), Gaps = 22/227 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + +   +   E      ++               + +    FS +GK   I  Q
Sbjct: 5   AWSPHGKILGATSAAGE------VVLWNDGNLTTLQTGNGTSVDCVAFSPDGKFLAIGGQ 58

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            +  + I+     +     L N        ++SP S+Q+ F   R     + V  ++ S+
Sbjct: 59  -NGQVKIWQ---DTQLIATLENAPAWVDKLAWSPTSNQLAFSLGR----YVQVWDADTSE 110

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                    +S     W   G  +A   + G    I   +    +  LL   S   A  W
Sbjct: 111 VVVTLNFDNSSVLGIDWRSDGQYLAIGGYQG--VKIWDSQNWDQEPYLLDMPSVSIAMAW 168

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQWV 443
           SP G+ L       G+    +  ++ N      +   P       W 
Sbjct: 169 SPDGKFLA-----SGNMDRSIAVLEWNNPDPWVMRGFPGKIRQLAWS 210



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 70/227 (30%), Gaps = 29/227 (12%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             + V D D + +       +  +    +  + Q +A           V + D++     
Sbjct: 99  RYVQVWDADTSEVVVTLNFDNSSVLGIDWRSDGQYLA-----IGGYQGVKIWDSQNWDQE 153

Query: 251 KRIGNFRSMILAPRFSSNGKRAL-------ISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
             + +  S+ +A  +S +GK          I+V +    D + +        +L  +   
Sbjct: 154 PYLLDMPSVSIAMAWSPDGKFLASGNMDRSIAVLEWNNPDPWVMRGFPGKIRQLAWSEAT 213

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVM----QSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 +   + I+  S  EG   + V           + R+  +         ++P   
Sbjct: 214 ------TKLGAPILASSSVEG---IVVWEKLEDETLGWEARVLTNHVDIITAIAFAPNSF 264

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
           L+A     G    + +  K     ++L        +  W   G+ L 
Sbjct: 265 LLASAASDGW---LCLWNKAKQVTQVLTGVSGGFSSLAWHSQGKFLA 308



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 60/207 (28%), Gaps = 15/207 (7%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            + I +     + G    +  V+  +  N+  L       +    FSP+ + +A      
Sbjct: 1   MTAIAWSPHGKILGATSAAGEVVLWNDGNLTTLQTGNGTSVDCVAFSPDGKFLAI----- 55

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                  +   +  +    + N  + +    +S    +   S+ +   +     D  ++ 
Sbjct: 56  -GGQNGQVKIWQDTQLIATLENAPAWVDKLAWSPTSNQLAFSLGRYVQVW----DADTSE 110

Query: 294 TER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L       +   +  D   +       G + + +  S   DQ+    D  +     
Sbjct: 111 VVVTLNFDNSSVLGIDWRSDGQYLA----IGGYQGVKIWDSQNWDQEPYLLDMPSVSIAM 166

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            WSP G  +A          +     D
Sbjct: 167 AWSPDGKFLASGNMDRSIAVLEWNNPD 193


>gi|296130096|ref|YP_003637346.1| putative FHA domain containing protein [Cellulomonas flavigena DSM
           20109]
 gi|296021911|gb|ADG75147.1| putative FHA domain containing protein [Cellulomonas flavigena DSM
           20109]
          Length = 1151

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 58/340 (17%), Positives = 101/340 (29%), Gaps = 98/340 (28%)

Query: 199 DGANIRYLTPSRDQ-----------ILFEPRFSPNQQKVAYATY-------------DDE 234
           DG+  R  TP+R                 P +SP   ++  AT                 
Sbjct: 470 DGSGRRSTTPARPGCGTPDDIDVPPGDAMPSYSPAGDRLVVATRTVTCELDDGEWVGSQG 529

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD----IYSVDLQ 290
             L V           +       + ++PR+S +G+R ++   +D+  +    +  VD+ 
Sbjct: 530 WALHVVDTTDLTSVPLEYDREPTDVDVSPRWSPDGRRIVLERYRDDGEEVERGLVLVDVA 589

Query: 291 SNAT-ERLTNTLFINI-----------SASYSPDSSQIVFES-------------DREGK 325
           S  T  R T  L +              AS+SPD++++V                   G 
Sbjct: 590 SGTTGPRPTRELELPEPEEWEYEVGVRDASWSPDATRLVVSRTVATSAARVAVPDSYAGT 649

Query: 326 EQLYVMQSNGSDQKRI---------SQDKEASY----FDPVWSPQGDLIAFTKFS--GEK 370
             L+V+  +     R          +      Y      P WSP G  IA    +     
Sbjct: 650 TSLWVVDVDAPATARELVARVDCGSTTCGPQEYVVRGRSPAWSPDGTRIAVASLALVRRS 709

Query: 371 FAIGVMKKDGSQERLLVEDSNL----------------------------QAPTWSPSGR 402
             + V+   G+   L ++D                                 P WSP G 
Sbjct: 710 GDVHVVDNPGAVSVLTLQDPAAGVVTDVRAVTGFHADGTPTASRPLVAASDEPAWSPDGS 769

Query: 403 SLIFSRKKDGDT-GSKLYSIDLNGRNETLINTP-AYASDP 440
            L  +    G +    ++ +  +G     +       +DP
Sbjct: 770 VLAVTAVPAGRSHELGVWLVAPDGSGARPVADGRGLETDP 809



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 68/203 (33%), Gaps = 31/203 (15%)

Query: 218 RFSPNQQKVAYATYD------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            F+   + +A+  +           + V +          R+    +    P  S    R
Sbjct: 145 AFADEVRYLAFVRHRPDVGPHHGGDVHVLVSRQGSPERVVRVTCDAARESHPVVSPETGR 204

Query: 272 ALISVQKDEAMDIYSVDLQ---------SNATERLTNTLFINISASYSPDSSQIVFESDR 322
              +     + D+                + T R+T+     +  ++ P S  +V+   R
Sbjct: 205 VAWATDAGGSWDVAVTTRSVEELGDACTQDETRRVTSGDADELWPAFVPSSDLVVYSGTR 264

Query: 323 E---GKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSP----QGDLIAFTKFSGEKFAI 373
           +   G   L++  + +  S   R++Q  E +   P  SP     G+      FS  +F  
Sbjct: 265 DDPAGLGDLWMQGVDAAESTATRLTQ-SEHAETQPSVSPLVARSGESYVLVAFSTTEF-- 321

Query: 374 GVMKKDGSQERL-LVEDSNLQAP 395
              ++DGS   L L  D +   P
Sbjct: 322 ---RRDGSVALLRLTGDPHGDGP 341



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 62/163 (38%), Gaps = 23/163 (14%)

Query: 306 SASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQ 357
           S +++ +   + F   R       G +   ++   GS ++  R++ D  A    PV SP+
Sbjct: 143 SGAFADEVRYLAFVRHRPDVGPHHGGDVHVLVSRQGSPERVVRVTCDA-ARESHPVVSPE 201

Query: 358 GDLIAFTKFSGEKFAIGVMKKD----------GSQERLLVEDSNLQAPTWSPSGRSLIFS 407
              +A+   +G  + + V  +               R+   D++   P + PS   +++S
Sbjct: 202 TGRVAWATDAGGSWDVAVTTRSVEELGDACTQDETRRVTSGDADELWPAFVPSSDLVVYS 261

Query: 408 RKKDGDTG-SKLYS--IDLNGRNETLINTPAYA-SDPQWVGFM 446
             +D   G   L+   +D      T +    +A + P     +
Sbjct: 262 GTRDDPAGLGDLWMQGVDAAESTATRLTQSEHAETQPSVSPLV 304



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 54/332 (16%), Positives = 85/332 (25%), Gaps = 90/332 (27%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID---RAPKRIGNFR 257
            +      S D     P F P+   V Y+   D+      L    +D       R+    
Sbjct: 233 QDETRRVTSGDADELWPAFVPSSDLVVYSGTRDDPAGLGDLWMQGVDAAESTATRLTQSE 292

Query: 258 SMILAPRFSS---------------------NGKRALISVQKDEAMDIYSVDLQSNATER 296
                P  S                      +G  AL+ +  D   D     +   +  R
Sbjct: 293 HAETQPSVSPLVARSGESYVLVAFSTTEFRRDGSVALLRLTGDPHGDGPFRPVPDRS--R 350

Query: 297 LTNTLFINISASYS--PDSSQIVF---ESDREGKEQLYVMQSNGSD-------------- 337
           L N    +    +   P  S+  F    S   G E   +  +  SD              
Sbjct: 351 LVNPYQSDPEHWWDTTPQGSEPAFGGPTSTTWGGEGFVLASTTTSDDPAGDVAVAMVGTQ 410

Query: 338 ---------QKRISQDKEASYFDPVW----SPQGDL-----IAFTKFSGEKFAIGVMKKD 379
                    Q R+  D       P W    SP G+      +     +       V   D
Sbjct: 411 GDADPAVEQQVRVVGDVGRPETHPTWTSGLSPFGEWYDAADLVAEVPAPPSVVSDVRADD 470

Query: 380 GSQERLLVE-------------DSNLQAPTWSPSGRSLIFSRKK----------DGDTGS 416
           GS  R                       P++SP+G  L+ + +            G  G 
Sbjct: 471 GSGRRSTTPARPGCGTPDDIDVPPGDAMPSYSPAGDRLVVATRTVTCELDDGEWVGSQGW 530

Query: 417 KLYSIDLNGRNETLINTPAYASD----PQWVG 444
            L+ +D        +      +D    P+W  
Sbjct: 531 ALHVVDTTDLTSVPLEYDREPTDVDVSPRWSP 562


>gi|116619305|ref|YP_821461.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116222467|gb|ABJ81176.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 812

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 59/177 (33%), Gaps = 12/177 (6%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI------ 213
           D I  S      D ++ ++F+     +    +     D +G            +      
Sbjct: 85  DGIMMSGIRISDDGST-VVFLRGEGPNRDGWSPNASADPNGPEHAIWAARTSGVGGAWRV 143

Query: 214 --LFEPRFSPNQQKVAYATYDDEDILRVYLMD--TRIDRAPKRIGNFRSMILAPRFSSNG 269
                P  +P+   + +         +V  +   + +DR  K       +   P++S +G
Sbjct: 144 VDATNPELAPDGSAILFVKAGQIFRAKVTPVKPASDVDRGEKAFITEWGVQSDPKWSPDG 203

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           ++      + +   I   D+ +   + ++ ++  +    +  DS  ++F   R G  
Sbjct: 204 RKIAFVSTRTDHSFIVVYDVATRTVKYMSPSVDFDTMPMWLADSKHLMFVR-RPGLP 259



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 68/197 (34%), Gaps = 24/197 (12%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISA-SYSPDSSQIVFES----D 321
            R       +   + Y+      A  RLTN      I +S    S D S +VF      +
Sbjct: 51  DRVAWVDYAEGKRNAYTAVAPLFAPVRLTNFLKDDGIMMSGIRISDDGSTVVFLRGEGPN 110

Query: 322 REGKEQLYVMQSNGSD----QKRISQDKEA----SYFDPVWSPQGDLIAFTKFSGEKFAI 373
           R+G         NG +      R S    A       +P  +P G  I F K +G+ F  
Sbjct: 111 RDGWSPNASADPNGPEHAIWAARTSGVGGAWRVVDATNPELAPDGSAILFVK-AGQIFRA 169

Query: 374 GVM------KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            V         D  ++  + E      P WSP GR + F   +   +   +Y +      
Sbjct: 170 KVTPVKPASDVDRGEKAFITEWGVQSDPKWSPDGRKIAFVSTRTDHSFIVVYDV-ATRTV 228

Query: 428 ETLINTPAYASDPQWVG 444
           + +  +  + + P W+ 
Sbjct: 229 KYMSPSVDFDTMPMWLA 245



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 70/225 (31%), Gaps = 43/225 (19%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF----RSMILAPRFSSNGKRALISV--- 276
            +VA+  Y +    R          AP R+ NF      M+   R S +G   +      
Sbjct: 51  DRVAWVDYAEGK--RNAYTAVAPLFAPVRLTNFLKDDGIMMSGIRISDDGSTVVFLRGEG 108

Query: 277 -QKDEAMDIYSVDLQS-------------NATERLTNTLFINISASYSPDSSQIVFESDR 322
             +D      S D                    R+ +      +   +PD S I+F    
Sbjct: 109 PNRDGWSPNASADPNGPEHAIWAARTSGVGGAWRVVDA----TNPELAPDGSAILFVK-- 162

Query: 323 EGKEQLYVM---------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
               Q++             +  ++  I++    S  DP WSP G  IAF     +   I
Sbjct: 163 --AGQIFRAKVTPVKPASDVDRGEKAFITEWGVQS--DPKWSPDGRKIAFVSTRTDHSFI 218

Query: 374 GVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSK 417
            V        + +    +    P W    + L+F R+     G +
Sbjct: 219 VVYDVATRTVKYMSPSVDFDTMPMWLADSKHLMFVRRPGLPFGLQ 263



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 56/190 (29%), Gaps = 25/190 (13%)

Query: 199 DGANIRYLT---PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           DG+ + +L    P+RD         PN  + A        +   + +    +        
Sbjct: 97  DGSTVVFLRGEGPNRDGWSPNASADPNGPEHAIWAARTSGVGGAWRVVDATN-------- 148

Query: 256 FRSMILAPRFSSNGKRALIS-----VQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                  P  + +G   L        +        + D+       +T    +     +S
Sbjct: 149 -------PELAPDGSAILFVKAGQIFRAKVTPVKPASDVDRGEKAFIT-EWGVQSDPKWS 200

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD  +I F S R     + V        K +S   +     P+W      + F +  G  
Sbjct: 201 PDGRKIAFVSTRTDHSFIVVYDVATRTVKYMSPSVD-FDTMPMWLADSKHLMFVRRPGLP 259

Query: 371 FAIGVMKKDG 380
           F +   +  G
Sbjct: 260 FGLQAQQGTG 269


>gi|302520101|ref|ZP_07272443.1| WD-repeat protein [Streptomyces sp. SPB78]
 gi|302428996|gb|EFL00812.1| WD-repeat protein [Streptomyces sp. SPB78]
          Length = 1489

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 44/333 (13%), Positives = 99/333 (29%), Gaps = 46/333 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
             +          RLWDV   +++                    D +  +     G     
Sbjct: 1153 TRLASAGSDGTVRLWDVATGRRLHELVGRG-------------DRLISAAFSPVG----- 1194

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               ++ +  +G     + + D DG              +   FS + +++A A  DD   
Sbjct: 1195 -TVLATAGSTGH----VYLWDADGGAFLRELDVETDRTWAEAFSADGEEIATANDDD--- 1246

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-E 295
              V L          ++   +  + +  F+ +G     +   D  + ++    +  A  E
Sbjct: 1247 -SVRLWRRATGSHGLQLDGHQGRVRSVAFAKDGATIA-TGCDDGRVRLW--HTRGGALAE 1302

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             L+       + ++ P+ S +   S  +G   ++         + + ++     +     
Sbjct: 1303 TLSAHTDRVYAVAFGPELSWLASAS-WDGTAVIWR----DGAARHVLREHTGKLWTAAAH 1357

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            P    +     +G+   I +           L      + + ++SP G  L        D
Sbjct: 1358 P---TLPLLATAGDDRVIRLWDPATGTRVGALTGHSGRVYSLSFSPDGGHLA---SAGDD 1411

Query: 414  TGSKLYSIDLN-GRNETLINTPAYASDPQWVGF 445
               +L+ +  + G   T   T        W  F
Sbjct: 1412 GTVRLWRVTGDAGPTVTPKATLVGVQGG-WAAF 1443



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 88/281 (31%), Gaps = 29/281 (10%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
               G +   +      + +G     + + D       +  P    +++   FSP+ + +A
Sbjct: 876  HPDGVWPITLNATGTVLATGDGDGVVRLWDTASGEQTHAFPGHTVLVYTTVFSPDGRMLA 935

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                  +    V L DT        +G  +  +   RFS +G   L +   +   D  +V
Sbjct: 936  ----TGDRSGTVRLWDTATGALVASLGPHQGPVFRVRFSPDGT--LFATADEGIDDHGTV 989

Query: 288  DLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
             +   + +RL +          +  + PD   +    D +G  +L+              
Sbjct: 990  RIWRASDQRLLHEMRGHTGRVYTLDFHPDGDLLA-SGDTDGGVRLW--DPRTGLPGPALD 1046

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---------RLLVEDSNLQA 394
                  +  V++  G  +A    +G   A+ + +     E         +      +  A
Sbjct: 1047 KGAGGVYQVVFADDGRHLAACHSNG---AVRLWQLSAGHEGYEAAPERFQPTPHQGSAWA 1103

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
              + P    L+       D   +++     G+ + ++    
Sbjct: 1104 CRFRPDDTQLV---TAGDDGVVQIWDA-ATGQGKPILRGHG 1140



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 92/331 (27%), Gaps = 40/331 (12%)

Query: 112  VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
             TG V+  G     V  RLWD    +Q                 HT+   +Y ++    G
Sbjct: 887  ATGTVLATGDGDGVV--RLWDTASGEQTHA-----------FPGHTV--LVYTTVFSPDG 931

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
                        + +G    ++ + D     +          +F  RFSP+    A A  
Sbjct: 932  ----------RMLATGDRSGTVRLWDTATGALVASLGPHQGPVFRVRFSPDGTLFATADE 981

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              +D   V +      R    +      +    F  +G     S   D  + ++  D ++
Sbjct: 982  GIDDHGTVRIWRASDQRLLHEMRGHTGRVYTLDFHPDGDLLA-SGDTDGGVRLW--DPRT 1038

Query: 292  NATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD----QKRIS-QDK 345
                  L           ++ D   +       G  +L+ + +         +R      
Sbjct: 1039 GLPGPALDKGAGGVYQVVFADDGRHLAAC-HSNGAVRLWQLSAGHEGYEAAPERFQPTPH 1097

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            + S +   + P    +  T        I        +  L      + A  +  +G  L 
Sbjct: 1098 QGSAWACRFRPDDTQLV-TAGDDGVVQIWDAATGQGKPILRGHGRRVNAVAFDATGTRLA 1156

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                   D   +L+ +   GR    +     
Sbjct: 1157 ---SAGSDGTVRLWDV-ATGRRLHELVGRGD 1183



 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 67/208 (32%), Gaps = 10/208 (4%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             + A  R+         +  RF P+  ++        D   V + D    +    +    
Sbjct: 1085 YEAAPERFQPTPHQGSAWACRFRPDDTQLV----TAGDDGVVQIWDAATGQGKPILRGHG 1140

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              + A  F + G R   S   D  + ++ V         L       ISA++SP  + + 
Sbjct: 1141 RRVNAVAFDATGTRLA-SAGSDGTVRLWDV-ATGRRLHELVGRGDRLISAAFSPVGTVLA 1198

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                      +Y+  ++G    R    +    +   +S  G+ IA T    +   +    
Sbjct: 1199 ---TAGSTGHVYLWDADGGAFLRELDVETDRTWAEAFSADGEEIA-TANDDDSVRLWRRA 1254

Query: 378  KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  +L      +++  ++  G ++ 
Sbjct: 1255 TGSHGLQLDGHQGRVRSVAFAKDGATIA 1282



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 60/192 (31%), Gaps = 10/192 (5%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            ++ +G     + +    G  +     +    ++   F P    +A A++D      ++  
Sbjct: 1280 TIATGCDDGRVRLWHTRGGALAETLSAHTDRVYAVAFGPELSWLASASWD--GTAVIWRD 1337

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                    +  G   +    P         L++   D+ +              LT    
Sbjct: 1338 GAARHVLREHTGKLWTAAAHPTLP------LLATAGDDRVIRLWDPATGTRVGALTGHSG 1391

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLI 361
               S S+SPD   +    D +G  +L+ +  + G      +           ++P G   
Sbjct: 1392 RVYSLSFSPDGGHLASAGD-DGTVRLWRVTGDAGPTVTPKATLVGVQGGWAAFTPDGGYK 1450

Query: 362  AFTKFSGEKFAI 373
            A  +  GE + +
Sbjct: 1451 AEGEVGGEFWHV 1462


>gi|183983394|ref|YP_001851685.1| putative regulatory protein [Mycobacterium marinum M]
 gi|183176720|gb|ACC41830.1| conserved hypothetical regulatory protein [Mycobacterium marinum M]
          Length = 1600

 Score = 66.6 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 52/330 (15%), Positives = 103/330 (31%), Gaps = 55/330 (16%)

Query: 116  VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI---SDDIYQSITGEKGD 172
            V             LWD+            ++P   R++   +   SD +        G 
Sbjct: 1265 VQTLASGGDDATIALWDL------------TNPGHPRQLGQPLRGHSDTVQSLAFSPDG- 1311

Query: 173  FNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYL---TPSRDQILFEPRFSPNQQKVAY 228
                      ++ SG    ++ + D  D  + R L          +    FSP+   +A 
Sbjct: 1312 ---------HTLASGSDDATIALWDLTDPTDPRQLGQPLRGHSDTVQSLAFSPDGHTLAS 1362

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISVQKDEAMDI 284
             + D      + L D      P+++G         + +  FS +G     S   D  + +
Sbjct: 1363 GSDDA----TIALWDLTNPGHPRQLGKPLRGHTRTVQSLAFSPDGHTLA-SGSDDTTIAL 1417

Query: 285  YSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNG----S 336
            + +        +L   L+   SA    ++SPD   +   S   G + + +         S
Sbjct: 1418 WDL-TDPAHARQLGKPLYGYSSAVLGVAFSPDGRLLASGS---GDDTVVLWNLTDPAHPS 1473

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQA 394
                             +SP G  +A          + +  +   G  + L     ++  
Sbjct: 1474 PLGHPLHGHSGYVNRVAFSPDGHTLASGSSDHTVQLWDLTNLTPAGLGQPLRGHTDSVLG 1533

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +SP G +L+ S     D   +++   L+
Sbjct: 1534 VAFSPDGHTLVSSS---ADATVRVWPTPLD 1560



 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 74/218 (33%), Gaps = 21/218 (9%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRAL 273
             FSP+   +A  ++D      + L +      P+R+G    +    + +  F+ +G    
Sbjct: 1037 AFSPDGHTLASGSHDG----TIRLWNLTDPAHPRRLGQPLQSHTGSVASIAFNPDGHTLA 1092

Query: 274  ISVQKDEAMDIYSV--DLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             S   D  + ++++            L          ++SPD   +   SD +G  +L+ 
Sbjct: 1093 -SGSHDGTIQLWNLTDPAHPGPLGPPLEGHSASVAGVAFSPDGHTLASGSD-DGTIRLWN 1150

Query: 331  M--QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLL 386
            +   ++        Q   A      + P G+ +A            V      G   + L
Sbjct: 1151 LTDPAHPGPLGPPLQGHSAGVASVAFGPDGNTLASGSVDDTVRLWDVTDPAQPGPLGQPL 1210

Query: 387  V-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  + +  + P G +L        D   +L++++ 
Sbjct: 1211 TGHHGTVWSIAFGPDGHTL---TTGSHDGTIRLWNLNT 1245



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 53/320 (16%), Positives = 96/320 (30%), Gaps = 55/320 (17%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                +    RLWDV D  Q         P       H          T     F      
Sbjct: 1184 ASGSVDDTVRLWDVTDPAQP-------GPLGQPLTGHH--------GTVWSIAFGPD--- 1225

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
               ++ +G    ++ + +    N           +    FSP+ Q +A       D   +
Sbjct: 1226 -GHTLTTGSHDGTIRLWNL---NTVLPVRGHTGPVRSAVFSPDVQTLA----SGGDDATI 1277

Query: 240  YLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             L D      P+++G         + +  FS +G     S   D  + ++ +        
Sbjct: 1278 ALWDLTNPGHPRQLGQPLRGHSDTVQSLAFSPDGHTLA-SGSDDATIALWDL-TDPTDPR 1335

Query: 296  RLTN----TLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRI---SQDKEA 347
            +L            S ++SPD   +   SD      + +    N    +++    +    
Sbjct: 1336 QLGQPLRGHSDTVQSLAFSPDGHTLASGSD---DATIALWDLTNPGHPRQLGKPLRGHTR 1392

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVE-----DSNLQAPTWSPSG 401
            +     +SP G  +A          I +    D +  R L +      S +    +SP G
Sbjct: 1393 TVQSLAFSPDGHTLASGSDDTT---IALWDLTDPAHARQLGKPLYGYSSAVLGVAFSPDG 1449

Query: 402  RSLIFSRKKDGDTGSKLYSI 421
            R L       GD    L+++
Sbjct: 1450 RLLA---SGSGDDTVVLWNL 1466



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 64/208 (30%), Gaps = 12/208 (5%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                   +    FSP+   +A  + D    L               + +  + +    FS
Sbjct: 980  LQGHSAGVVSIAFSPDGHTLASGSDDGTIRLWNLTDPAHPGPLDPPLEDHSAGVAEVAFS 1039

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLT----NTLFINISASYSPDSSQIVFESDR 322
             +G     S   D  + ++++        RL     +      S +++PD   +   S  
Sbjct: 1040 PDGHTLA-SGSHDGTIRLWNL-TDPAHPRRLGQPLQSHTGSVASIAFNPDGHTLASGSH- 1096

Query: 323  EGKEQLYVM--QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +G  QL+ +   ++        +   AS     +SP G  +A     G      +     
Sbjct: 1097 DGTIQLWNLTDPAHPGPLGPPLEGHSASVAGVAFSPDGHTLASGSDDGTIRLWNLTDPAH 1156

Query: 381  S---QERLLVEDSNLQAPTWSPSGRSLI 405
                   L    + + +  + P G +L 
Sbjct: 1157 PGPLGPPLQGHSAGVASVAFGPDGNTLA 1184



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/380 (13%), Positives = 107/380 (28%), Gaps = 56/380 (14%)

Query: 43   ANYSPVSIAFT-KFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ 101
             +  PV  A     V     GG  + +   DL               Q +       +  
Sbjct: 1251 GHTGPVRSAVFSPDVQTLASGGDDATIALWDLTNPGH-----PRQLGQPLRGHSDTVQSL 1305

Query: 102  DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI--- 158
             ++  G                      LWD+            + P   R++   +   
Sbjct: 1306 AFSPDG---------HTLASGSDDATIALWDL------------TDPTDPRQLGQPLRGH 1344

Query: 159  SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD--GANIRY--LTPSRDQIL 214
            SD +        G           ++ SG    ++ + D    G   +         + +
Sbjct: 1345 SDTVQSLAFSPDG----------HTLASGSDDATIALWDLTNPGHPRQLGKPLRGHTRTV 1394

Query: 215  FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
                FSP+   +A  + D    L          +  K +  + S +L   FS +G+    
Sbjct: 1395 QSLAFSPDGHTLASGSDDTTIALWDLTDPAHARQLGKPLYGYSSAVLGVAFSPDGRLLA- 1453

Query: 275  SVQKDEAMDIYSV-DLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLY-V 330
            S   D+ + ++++ D    +     L          ++SPD   +   S  +   QL+ +
Sbjct: 1454 SGSGDDTVVLWNLTDPAHPSPLGHPLHGHSGYVNRVAFSPDGHTLASGSS-DHTVQLWDL 1512

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL---LV 387
                 +   +  +    S     +SP G  +  +  +     +     D +   L   L 
Sbjct: 1513 TNLTPAGLGQPLRGHTDSVLGVAFSPDGHTLV-SSSADATVRVWPTPLDATVTVLCSKLT 1571

Query: 388  E--DSNLQAPTWSPSGRSLI 405
                 +      SP    + 
Sbjct: 1572 SNISRHDWREWISPDVDYIA 1591


>gi|332877767|ref|ZP_08445508.1| peptidase, S9A/B/C family, catalytic domain protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332684347|gb|EGJ57203.1| peptidase, S9A/B/C family, catalytic domain protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 637

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 68/184 (36%), Gaps = 20/184 (10%)

Query: 265 FSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQ 315
           +S +G++ L   +             +IY  DL +  T  LT  +   + +  Y+ +   
Sbjct: 179 WSPDGEKVLFVTKAKEGTEYVLSTNTNIYEYDLNTMKTRNLTEGMMGYDTNPQYNKEG-V 237

Query: 316 IVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           + + S     +   K  LY+++     +  ++   + + F   WS  G  I     +   
Sbjct: 238 LAWLSMAHDGNESDKNDLYILK--DGKRINLTAQWDNTVFSYRWSNDGKQIYLIAPTQGT 295

Query: 371 FAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             + V+   G     + L +           SG  L+  R      G ++Y+I+L  R +
Sbjct: 296 EQLFVVDVYGKDTTPKQLTKGIYDVGSIVGQSGNLLVVMRNDMNRAG-EVYTINLKERKK 354

Query: 429 TLIN 432
             ++
Sbjct: 355 GFLS 358



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 76/239 (31%), Gaps = 24/239 (10%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEP-- 217
           D Y  +    G   S +        +    N + + D +G N R L   +       P  
Sbjct: 114 DFYADLEKSSGRLYSSLDHRHWDTWNEGKYNHVFIEDAEG-NQRDLMEGQPFYCPQMPFG 172

Query: 218 -----RFSPNQQKVAYATYDDEDILR-------VYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 +SP+ +KV + T   E           +Y  D    +              P++
Sbjct: 173 GEEDYIWSPDGEKVLFVTKAKEGTEYVLSTNTNIYEYDLNTMKTRNLTEGMMGYDTNPQY 232

Query: 266 SSNGKRALISVQKDEA----MDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFES 320
           +  G  A +S+  D       D+Y   L+      LT      + S  +S D  QI   +
Sbjct: 233 NKEGVLAWLSMAHDGNESDKNDLYI--LKDGKRINLTAQWDNTVFSYRWSNDGKQIYLIA 290

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKK 378
             +G EQL+V+   G D       K       +    G+L+   +        +  +  
Sbjct: 291 PTQGTEQLFVVDVYGKDTTPKQLTKGIYDVGSIVGQSGNLLVVMRNDMNRAGEVYTINL 349



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 80/215 (37%), Gaps = 17/215 (7%)

Query: 176 RILFVSESVVSG----IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT- 230
           ++LFV+++            ++   D +    R LT         P++   +  +A+ + 
Sbjct: 185 KVLFVTKAKEGTEYVLSTNTNIYEYDLNTMKTRNLTEGMMGYDTNPQY-NKEGVLAWLSM 243

Query: 231 -YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            +D  +  +  L   +  +       + + + + R+S++GK+  +         ++ VD+
Sbjct: 244 AHDGNESDKNDLYILKDGKRINLTAQWDNTVFSYRWSNDGKQIYLIAPTQGTEQLFVVDV 303

Query: 290 QSN--ATERLTNTLFINISASYSPDSS-QIVFESDREGKEQLYVMQSNGS-----DQKRI 341
                  ++LT  +  ++ +      +  +V  +D     ++Y +             ++
Sbjct: 304 YGKDTTPKQLTKGI-YDVGSIVGQSGNLLVVMRNDMNRAGEVYTINLKERKKGFLSLTQL 362

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           S   + +Y +    P  + I  T   G+     V+
Sbjct: 363 SHFNDEAYKNIATCPIKERIIKTS-DGKDMHAWVI 396


>gi|291571790|dbj|BAI94062.1| serine/threonine protein kinase with WD-40 repeats [Arthrospira
           platensis NIES-39]
          Length = 673

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 82/236 (34%), Gaps = 12/236 (5%)

Query: 173 FNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           + + I F  +     SG    ++ + D       Y        + +  FSP    +A A+
Sbjct: 430 WVTSIAFSPKEEILASGSRDQTVEIWDLKKGKRWYTLIGHQDTVEQVAFSPQGDILASAS 489

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D      + + D +  +    +      I    FS +G+    S  +D+ + ++  +LQ
Sbjct: 490 RDK----TIQIWDLKKGKPFYSLSGHSDRIYGVAFSPDGQTLA-SASRDKTVRLW--NLQ 542

Query: 291 SNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                  L        + ++SP+   +     R+G   L+  Q       R  +  +A  
Sbjct: 543 QRQELGSLPRWSDWVRTVAFSPNGQMLA-GGCRDGSIGLWHQQDQTWKLWRTLRADDADI 601

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
               + P    +  T  S  +  I  +      E +    +++ +  +S  G+++ 
Sbjct: 602 LAIAFQPDSKQLI-TGNSKGQIDIWQLGDGTLLETIPAHSADILSLAFSLDGKTIA 656



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 72/205 (35%), Gaps = 15/205 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +  LT  R+Q+     FSP+Q+ +A ++ D      + +   +  +    +    + + +
Sbjct: 379 LHTLTGHRNQVTCV-AFSPDQEILASSSQDM----TIEIWRLKTGKRWYTLTGHENWVTS 433

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             FS   +  L S  +D+ ++I+ +  +      L          ++SP    +   S  
Sbjct: 434 IAFSPK-EEILASGSRDQTVEIWDL-KKGKRWYTLIGHQDTVEQVAFSPQGDILASASR- 490

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--G 380
              + + +                   +   +SP G  +A            + ++   G
Sbjct: 491 --DKTIQIWDLKKGKPFYSLSGHSDRIYGVAFSPDGQTLASASRDKTVRLWNLQQRQELG 548

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI 405
           S  R       ++   +SP+G+ L 
Sbjct: 549 SLPRW---SDWVRTVAFSPNGQMLA 570



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 76/244 (31%), Gaps = 32/244 (13%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     +WD+K  K    + +         I H   D + Q     +GD       
Sbjct: 444 ASGSRDQTVEIWDLKKGK----RWYT-------LIGHQ--DTVEQVAFSPQGDIL----- 485

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                 S     ++ + D       Y        ++   FSP+ Q +A A+ D      V
Sbjct: 486 -----ASASRDKTIQIWDLKKGKPFYSLSGHSDRIYGVAFSPDGQTLASASRDK----TV 536

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATERLT 298
            L + +  +    +  +   +    FS NG+       +D ++ ++   D        L 
Sbjct: 537 RLWNLQQRQELGSLPRWSDWVRTVAFSPNGQMLA-GGCRDGSIGLWHQQDQTWKLWRTLR 595

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                 ++ ++ PDS Q++       K Q+ + Q              A      +S  G
Sbjct: 596 ADDADILAIAFQPDSKQLI---TGNSKGQIDIWQLGDGTLLETIPAHSADILSLAFSLDG 652

Query: 359 DLIA 362
             IA
Sbjct: 653 KTIA 656



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 65/169 (38%), Gaps = 9/169 (5%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +   R+ +    FS + +  L S  +D  ++I+ +         LT       S ++SP 
Sbjct: 382 LTGHRNQVTCVAFSPD-QEILASSSQDMTIEIWRL-KTGKRWYTLTGHENWVTSIAFSPK 439

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +   S R+   +++        +       + +     +SPQGD++A      +   
Sbjct: 440 EEILASGS-RDQTVEIW--DLKKGKRWYTLIGHQDTVEQVAFSPQGDILASASRD-KTIQ 495

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           I  +KK      L      +    +SP G++L  + +   D   +L+++
Sbjct: 496 IWDLKKGKPFYSLSGHSDRIYGVAFSPDGQTLASASR---DKTVRLWNL 541


>gi|58580032|ref|YP_199048.1| hypothetical protein XOO0409 [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|58424626|gb|AAW73663.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 302

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 68/214 (31%), Gaps = 25/214 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATER----LTNTLFINI 305
           + +  +       S +G+R + +  +       D++   L+    +       NT     
Sbjct: 42  VVSTPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQNALPLPINTAQDET 101

Query: 306 SASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSP 356
           + ++S D   ++F S R    G   LY    +        Q      +   +   P  S 
Sbjct: 102 TPTFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSL 161

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLIFS 407
            G  + F            + V   DG      V   ++ +        W   GR+L+++
Sbjct: 162 DGMRLLFASDGHGGAGGMDLFVAHWDGKAFSQPVALVDINSAADELDAAWLGDGRALVWT 221

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R K       L +   +G     +  P   + PQ
Sbjct: 222 RGKTDGPSQLLLATCKDGHFAQGLPLPLSFNGPQ 255



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 58/170 (34%), Gaps = 24/170 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGS---DQKRISQDKEASYFDP 352
           +T      A+ SPD  +IV+ SDR    G   L+  Q  G    +   +  +       P
Sbjct: 44  STPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQNALPLPINTAQDETTP 103

Query: 353 VWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQE--------RLLVEDSNLQAPTWSPSG 401
            +S  G  + F            +     D              +    N +APT S  G
Sbjct: 104 TFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSLDG 163

Query: 402 RSLIFSRK-KDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
             L+F+     G  G  L+    +G+  +       IN+ A   D  W+G
Sbjct: 164 MRLLFASDGHGGAGGMDLFVAHWDGKAFSQPVALVDINSAADELDAAWLG 213



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 22/168 (13%)

Query: 220 SPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ Q++ +A+         D+ +  L   R   A     N       P FS++G+  L 
Sbjct: 55  SPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQNALPLPINTAQDETTPTFSADGRWLLF 114

Query: 275 SVQKDEAM---DIYSVDLQS----NATERL---TNTLFINISASYSPDSSQIVFESD--- 321
           +  +       D+Y   + +     A + +    N+     + + S D  +++F SD   
Sbjct: 115 ASTRPGGAGGSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSLDGMRLLFASDGHG 174

Query: 322 REGKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQGDLIAFTK 365
             G   L+V   +G    +    +  +  A   D  W   G  + +T+
Sbjct: 175 GAGGMDLFVAHWDGKAFSQPVALVDINSAADELDAAWLGDGRALVWTR 222



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 51/165 (30%), Gaps = 19/165 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTP---SRDQILFEPRFSPNQQKVAYATYDDE--- 234
           +     G     L      G   +   P   +  Q    P FS + + + +A+       
Sbjct: 64  ASDRAGGAGGWDLWQAQLRGGRWQNALPLPINTAQDETTPTFSADGRWLLFASTRPGGAG 123

Query: 235 --DILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEAM---DIYS 286
             D+ R  +    +  A + +G   N      AP  S +G R L +          D++ 
Sbjct: 124 GSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSLDGMRLLFASDGHGGAGGMDLFV 183

Query: 287 VDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREGKE 326
                 A  +       N+    + A++  D   +V+   +    
Sbjct: 184 AHWDGKAFSQPVALVDINSAADELDAAWLGDGRALVWTRGKTDGP 228


>gi|156936069|ref|YP_001439985.1| hypothetical protein ESA_03963 [Cronobacter sakazakii ATCC BAA-894]
 gi|156534323|gb|ABU79149.1| hypothetical protein ESA_03963 [Cronobacter sakazakii ATCC BAA-894]
          Length = 420

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 60/162 (37%), Gaps = 21/162 (12%)

Query: 279 DEAMDIYSVDLQSNATERLT-----NTLFINISAS-Y---SPDSSQIVF-ESDREGKEQL 328
           +   D            RLT         +  +   +   +P  ++I F  +D  G  QL
Sbjct: 266 EGTPDAMPAPPAGVMQRRLTFTHDRRYPGLATTPRHWVRSNPQGTEIAFLMNDDNGVAQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + +++++  +       W P G+ I F + +     I +   +  +   L  
Sbjct: 326 WLIAPAGGEPRQVTRGAQGVASAFSWHPSGEAIGFMQGN----RIVLCDINTGKITPLTP 381

Query: 389 DSN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                    A   SP G+ + + ++ DG    +++ +   GR
Sbjct: 382 PQTAAISADAVVISPDGKRIAWMQETDGFR--QIW-MTETGR 420



 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 17/123 (13%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASY--------FDPVWSPQGDLIAFTKFSGEKF-AI 373
           EG          G  Q+R++   +  Y             +PQG  IAF          +
Sbjct: 266 EGTPDAMPAPPAGVMQRRLTFTHDRRYPGLATTPRHWVRSNPQGTEIAFLMNDDNGVAQL 325

Query: 374 GVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            ++   G + R +   +     A +W PSG ++ F +      G+++   D+N    T +
Sbjct: 326 WLIAPAGGEPRQVTRGAQGVASAFSWHPSGEAIGFMQ------GNRIVLCDINTGKITPL 379

Query: 432 NTP 434
             P
Sbjct: 380 TPP 382



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   ++A+   DD  + +++L+        +     + +  A  +  +G+         +
Sbjct: 307 PQGTEIAFLMNDDNGVAQLWLIAPAGGEPRQVTRGAQGVASAFSWHPSGEAIGFM----Q 362

Query: 281 AMDIYSVDLQSNATERLT--NTLFINISA-SYSPDSSQIVFESDREGKEQLYVM 331
              I   D+ +     LT   T  I+  A   SPD  +I +  + +G  Q+++ 
Sbjct: 363 GNRIVLCDINTGKITPLTPPQTAAISADAVVISPDGKRIAWMQETDGFRQIWMT 416



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 33/97 (34%), Gaps = 9/97 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++   G   R +T     +     + P+ + + +         R+ L D    +   
Sbjct: 324 QLWLIAPAGGEPRQVTRGAQGVASAFSWHPSGEAIGFM-----QGNRIVLCDINTGKIT- 377

Query: 252 RIGNFRSMIL---APRFSSNGKRALISVQKDEAMDIY 285
            +   ++  +   A   S +GKR     + D    I+
Sbjct: 378 PLTPPQTAAISADAVVISPDGKRIAWMQETDGFRQIW 414


>gi|83816136|ref|YP_446747.1| prolyl oligopeptidase family protein, putative [Salinibacter ruber
           DSM 13855]
 gi|83757530|gb|ABC45643.1| prolyl oligopeptidase family protein, putative [Salinibacter ruber
           DSM 13855]
          Length = 937

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/267 (13%), Positives = 83/267 (31%), Gaps = 58/267 (21%)

Query: 221 PNQQKVAYATYDD--------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           P+  +V +              D+   Y  D   D              APR+S +G+  
Sbjct: 74  PDGNRVLWVKETPDPEADETTSDVYLTYRDDPHGDSTATLQLTRTGDNRAPRWSPDGEHI 133

Query: 273 LISVQKDE-------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
                +++          I+ +D +  A E +T+       A +  D  +++F +  +  
Sbjct: 134 AFLSSREQEDAAESSGTQIWRLDPRGGAPEVITSVEHGVQGARWL-DDDRLLFTAREQNT 192

Query: 326 E------------------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                                    +L+ +     +  R++ + +    +   SP G  +
Sbjct: 193 RYEQHLEQTEDDADVIEDTTLFRPVRLFTVHVGTGEVTRVT-NNDHQIGEFAPSPNGSRV 251

Query: 362 AFTKFSG-------EKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLI----FS 407
            ++            +    ++  +      + ++  +  P+   W+  G        +S
Sbjct: 252 VYSLSDSPITADARNQPHQFLLNLNTGATTEIFDEQYVD-PSNFQWTADGAGFYATDSYS 310

Query: 408 RK--KDGDTGSKLYSIDLNGRNETLIN 432
                +G   +KLY  DL  R+   + 
Sbjct: 311 SDPEHEGAGITKLYHYDLAARDYQEVP 337



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 78/217 (35%), Gaps = 40/217 (18%)

Query: 181 SESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVAYATYD----- 232
           +    +    + + +  RD   G +   L  +R      PR+SP+ + +A+ +       
Sbjct: 85  TPDPEADETTSDVYLTYRDDPHGDSTATLQLTRTGDNRAPRWSPDGEHIAFLSSREQEDA 144

Query: 233 -DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-------- 283
            +    +++ +D R   AP+ I +    +   R+  + +    + +++   +        
Sbjct: 145 AESSGTQIWRLDPR-GGAPEVITSVEHGVQGARWLDDDRLLFTAREQNTRYEQHLEQTED 203

Query: 284 ---------------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-------ESD 321
                          +++V + +    R+TN        + SP+ S++V+        +D
Sbjct: 204 DADVIEDTTLFRPVRLFTVHVGTGEVTRVTNNDHQIGEFAPSPNGSRVVYSLSDSPITAD 263

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              +   +++  N      I  ++     +  W+  G
Sbjct: 264 ARNQPHQFLLNLNTGATTEIFDEQYVDPSNFQWTADG 300



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 43/116 (37%), Gaps = 17/116 (14%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVM-----KKDGSQERLLVEDSNLQ 393
            + S  D    P G+ + + K + +         + +        D +    L    + +
Sbjct: 63  TQRSLTDVDIGPDGNRVLWVKETPDPEADETTSDVYLTYRDDPHGDSTATLQLTRTGDNR 122

Query: 394 APTWSPSGRSLIFSRKKD-----GDTGSKLYSIDLNGRNETLINTPAYASDPQ-WV 443
           AP WSP G  + F   ++       +G++++ +D  G    +I +  +      W+
Sbjct: 123 APRWSPDGEHIAFLSSREQEDAAESSGTQIWRLDPRGGAPEVITSVEHGVQGARWL 178


>gi|186681412|ref|YP_001864608.1| peptidase S9 prolyl oligopeptidase [Nostoc punctiforme PCC 73102]
 gi|186463864|gb|ACC79665.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Nostoc punctiforme PCC 73102]
          Length = 628

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 89/229 (38%), Gaps = 19/229 (8%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-- 274
           P+ SP+ + +AY   D++++L+V+L     +       + +  I    ++ N  + +   
Sbjct: 27  PQLSPDGKYLAYIAPDEKNVLQVWLRTIGQEDDQILTADKKRGIRIFFWTYNADQLIYMQ 86

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLF-----INISASYSPDSSQIVFESDREGKEQLY 329
               DE   ++ V++ S     LT         + +   + P+   +    +   K  +Y
Sbjct: 87  DSDGDENFHLHLVNIHSKIVRDLTPFQGVKAELVELEPKF-PEQVLVALNLNNPQKFDVY 145

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +       +    D +       W+   D     A    +   + + + K D  Q  +L
Sbjct: 146 RINLKNGAVE---FDTDNPGNIISWTSDADFQIRAATASTADGGYDLLLQKPD-KQWEIL 201

Query: 387 VEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
               + +   + ++S  G++L      D +   +L ++DL+ R ET+I 
Sbjct: 202 RHWGSEEEGNSVSFSADGKTLYIQGNHDAN-AKRLLAVDLDTRQETVIA 249



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 53/142 (37%), Gaps = 13/142 (9%)

Query: 305 ISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            S   SPD   + + + D +   Q+++      D + ++ DK+       W+   D + +
Sbjct: 25  TSPQLSPDGKYLAYIAPDEKNVLQVWLRTIGQEDDQILTADKKRGIRIFFWTYNADQLIY 84

Query: 364 TKFSGE--KFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTG 415
            + S     F + ++       R L     ++A      P + P    ++ +   +    
Sbjct: 85  MQDSDGDENFHLHLVNIHSKIVRDLTPFQGVKAELVELEPKF-P--EQVLVALNLNNPQK 141

Query: 416 SKLYSIDL-NGRNETLINTPAY 436
             +Y I+L NG  E   + P  
Sbjct: 142 FDVYRINLKNGAVEFDTDNPGN 163


>gi|315443672|ref|YP_004076551.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Mycobacterium
           sp. Spyr1]
 gi|315261975|gb|ADT98716.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Mycobacterium
           sp. Spyr1]
          Length = 668

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 63/200 (31%), Gaps = 4/200 (2%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
            +       + R +     D +  S      D    +   +       ++++L  +D + 
Sbjct: 185 ARTHLFDADTKRDVTPDPGDALRDSHFDVSPDGGFLVASWNVPAPGAALRSTLVHIDVNT 244

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            +   +    +     P  +P+   VAY            R+ L        P+ +    
Sbjct: 245 GDRAVIVDDPESDAGFPAIAPDGTSVAYLRETLSTPHHAPRITLSLLHFGEEPRELTAHW 304

Query: 258 SMI-LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                +  +S++G   L++   D    I++VD Q+ A   L +  +       +P     
Sbjct: 305 DRWPTSVTWSADGSTLLVTADDDGRGPIFAVDPQTGAVRTLVSDDYTYTDVRAAPGGVIF 364

Query: 317 VFESDREGKEQLYVMQSNGS 336
              S     +    +  +G+
Sbjct: 365 ALRSSYAAPQHPVRIDPDGT 384



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 63/212 (29%), Gaps = 14/212 (6%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-----AMDIYSVDL 289
              R +L D    R                 S +G   + S             +  +D+
Sbjct: 183 GPARTHLFDADTKRDVTPDPGDALRDSHFDVSPDGGFLVASWNVPAPGAALRSTLVHIDV 242

Query: 290 QSNATERLTNTLFINIS-ASYSPDSSQIVFE----SDREGKEQLYVMQSN-GSDQKRISQ 343
            +     + +    +    + +PD + + +     S      ++ +   + G + + ++ 
Sbjct: 243 NTGDRAVIVDDPESDAGFPAIAPDGTSVAYLRETLSTPHHAPRITLSLLHFGEEPRELTA 302

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGR 402
             +       WS  G  +  T     +  I  +       R LV +D        +P G 
Sbjct: 303 HWDRWPTSVTWSADGSTLLVTADDDGRGPIFAVDPQTGAVRTLVSDDYTYTDVRAAPGG- 361

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            +IF+ +           ID +G    L   P
Sbjct: 362 -VIFALRSSYAAPQHPVRIDPDGTITVLDCVP 392


>gi|298489656|ref|YP_003719833.1| WD40 domain-containing protein ['Nostoc azollae' 0708]
 gi|298231574|gb|ADI62710.1| WD40 domain protein beta Propeller ['Nostoc azollae' 0708]
          Length = 184

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 3/118 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFE 319
           P  S NG+       ++    +   DLQ+ +      L     I  S S S     I + 
Sbjct: 50  PALSGNGRFLAFVSNRNGNQQLLMYDLQTQSFIPTPGLNRRATIAESPSLSYTGRYICYL 109

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +  +G+  + +        + ++        +P  SP G  + F   S  ++ + V+ 
Sbjct: 110 TSEQGRPVIALYDRAMQQSQILTPTYRGWVRNPDISPDGRYVVFESASRGQWDVEVLD 167



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 4/124 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--QKRISQDKEASYFDPVWSP 356
           N+ F     + S +   + F S+R G +QL +                +      P  S 
Sbjct: 42  NSRFTEEQPALSGNGRFLAFVSNRNGNQQLLMYDLQTQSFIPTPGLNRRATIAESPSLSY 101

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  I +      +  I +  +   Q ++L       ++ P  SP GR ++F     G  
Sbjct: 102 TGRYICYLTSEQGRPVIALYDRAMQQSQILTPTYRGWVRNPDISPDGRYVVFESASRGQW 161

Query: 415 GSKL 418
             ++
Sbjct: 162 DVEV 165



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 50/132 (37%), Gaps = 2/132 (1%)

Query: 216 EPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +P  S N + +A+ +  + +  L +Y + T+       +    ++  +P  S  G+    
Sbjct: 49  QPALSGNGRFLAFVSNRNGNQQLLMYDLQTQSFIPTPGLNRRATIAESPSLSYTGRYICY 108

Query: 275 SVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              +     I   D     ++ LT        +   SPD   +VFES   G+  + V+  
Sbjct: 109 LTSEQGRPVIALYDRAMQQSQILTPTYRGWVRNPDISPDGRYVVFESASRGQWDVEVLDR 168

Query: 334 NGSDQKRISQDK 345
             + +  IS   
Sbjct: 169 GPTVELDISNGS 180



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 35/106 (33%), Gaps = 1/106 (0%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S  +G  +  +  +             R  I   P  S   + + Y T +    + + L 
Sbjct: 63  SNRNGNQQLLMYDLQTQSFIPTPGLNRRATIAESPSLSYTGRYICYLTSEQGRPV-IALY 121

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           D  + ++      +R  +  P  S +G+  +         D+  +D
Sbjct: 122 DRAMQQSQILTPTYRGWVRNPDISPDGRYVVFESASRGQWDVEVLD 167



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 28/94 (29%), Gaps = 6/94 (6%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-----LQAPTWSPSGRSLIF 406
           P  S  G  +AF         + +         +     N      ++P+ S +GR + +
Sbjct: 50  PALSGNGRFLAFVSNRNGNQQLLMYDLQTQSF-IPTPGLNRRATIAESPSLSYTGRYICY 108

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
              + G     LY   +            +  +P
Sbjct: 109 LTSEQGRPVIALYDRAMQQSQILTPTYRGWVRNP 142


>gi|170107560|ref|XP_001884990.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164640204|gb|EDR04471.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 427

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 75/209 (35%), Gaps = 15/209 (7%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +  +  S      + +   M++      ++     + +    FSP+ +++   ++D    
Sbjct: 220 VADLRHSHEKHYQETAQQFMEQFTDPSIFVLSGHTERITSVTFSPDGRRIVSGSWD--RT 277

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-- 294
           +R++   T      +      ++IL   FS +G R + S   D+ + I+  D+++     
Sbjct: 278 IRIWDAGTG-KPMGEPFQGHTAVILLVAFSPDGGRLV-SGSYDQTIRIW--DVETGKPMG 333

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPV 353
           E          S ++SPD  +IV  S   G   + +  +  G       Q          
Sbjct: 334 EPFQGHTGDINSVAFSPDGGRIVSGS---GDRTVRIWDAETGKSAGEPFQGHTGDINSVA 390

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +SP G  I       +   I +   +  +
Sbjct: 391 FSPDGGRIV---SGSDDRTIRIWDAETGK 416



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 53/166 (31%), Gaps = 15/166 (9%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFI 303
            D +   +      I +  FS +G+R + S   D  + I+  D  +     E       +
Sbjct: 243 TDPSIFVLSGHTERITSVTFSPDGRRIV-SGSWDRTIRIW--DAGTGKPMGEPFQGHTAV 299

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIA 362
            +  ++SPD  ++V  S     + + +             Q          +SP G  I 
Sbjct: 300 ILLVAFSPDGGRLVSGSY---DQTIRIWDVETGKPMGEPFQGHTGDINSVAFSPDGGRIV 356

Query: 363 FTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSLI 405
                     + +   +      E       ++ +  +SP G  ++
Sbjct: 357 ---SGSGDRTVRIWDAETGKSAGEPFQGHTGDINSVAFSPDGGRIV 399



 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 10/169 (5%)

Query: 182 ESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             +VSG    ++ + D   G  +         ++    FSP+  ++   +YD      + 
Sbjct: 267 RRIVSGSWDRTIRIWDAGTGKPMGEPFQGHTAVILLVAFSPDGGRLVSGSYDQ----TIR 322

Query: 241 LMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           + D    +   +        I +  FS +G R + S   D  + I+  +   +A E    
Sbjct: 323 IWDVETGKPMGEPFQGHTGDINSVAFSPDGGRIV-SGSGDRTVRIWDAETGKSAGEPFQG 381

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                 S ++SPD  +IV  SD      + +  +              S
Sbjct: 382 HTGDINSVAFSPDGGRIVSGSD---DRTIRIWDAETGKSAGEPFQGHNS 427


>gi|329890339|ref|ZP_08268682.1| prolyl oligopeptidase family protein [Brevundimonas diminuta ATCC
           11568]
 gi|328845640|gb|EGF95204.1| prolyl oligopeptidase family protein [Brevundimonas diminuta ATCC
           11568]
          Length = 644

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 65/222 (29%), Gaps = 5/222 (2%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G  +    F   S         L   D      + +  +   +      S + + VA   
Sbjct: 150 GFSDDGQTFWLTSNERDAQVFDLYAYDAATYERKLMFQNPGGMDVA-AVSGDGRLVALTK 208

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRALISVQKDEAM-DIYSV 287
                   +YL D +    P  I      +      F       + +  +D      Y+ 
Sbjct: 209 SHTSANSDIYLADLQAGGEPFLITPHTGDVAYDVSGFGPFNATLIYTSNEDGEFAQAYAY 268

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D+   A  R T   +  +  SYSP+    V   + +   +L +  +      R++   + 
Sbjct: 269 DIADKAHNRTTQADWDVMYVSYSPNGRYRVTAVNADASTELTIEDAQNRAPVRLTGLPQG 328

Query: 348 SYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVE 388
                 + P   L AFT  S      + V      Q R L  
Sbjct: 329 DITGVRFDPGAGLAAFTVVSDTSPADVFVADLSTGQARRLTH 370



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 67/225 (29%), Gaps = 13/225 (5%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA- 281
            +     + D   +   Y +            +  +   A  +  +G+R L++  +    
Sbjct: 63  GRTHVLISSDKTGVFNAYALPVAGGDPVPLTASTTNATFAQSYFPDGRRVLVAADQGGNE 122

Query: 282 -MDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKE--QLYVMQSNGSD 337
              IY  ++       LT    +      +S D       S+    +   LY   +   +
Sbjct: 123 LTHIYVREID-GTLRDLTPGDKLKAGFVGFSDDGQTFWLTSNERDAQVFDLYAYDAATYE 181

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLL----VEDSNL 392
           +K +             S  G L+A T   +     I +       E  L      D   
Sbjct: 182 RK-LMFQNPGGMDVAAVSGDGRLVALTKSHTSANSDIYLADLQAGGEPFLITPHTGDVAY 240

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               + P   +LI++  +DG+     Y+ D+  +         + 
Sbjct: 241 DVSGFGPFNATLIYTSNEDGEFAQA-YAYDIADKAHNRTTQADWD 284



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 73/218 (33%), Gaps = 9/218 (4%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             +   G +   LT S     F   + P+ ++V     D       ++    ID   + +
Sbjct: 80  YALPVAGGDPVPLTASTTNATFAQSYFPDGRRVL-VAADQGGNELTHIYVREIDGTLRDL 138

Query: 254 GNFRSMILA-PRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYS 310
                +      FS +G+   ++  + +A   D+Y+ D  +   + +         A+ S
Sbjct: 139 TPGDKLKAGFVGFSDDGQTFWLTSNERDAQVFDLYAYDAATYERKLMFQNPGGMDVAAVS 198

Query: 311 PDSSQIVFE-SDREGKEQLYVMQS-NGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFS 367
            D   +    S       +Y+     G +   I+    + +Y    + P    + +T   
Sbjct: 199 GDGRLVALTKSHTSANSDIYLADLQAGGEPFLITPHTGDVAYDVSGFGPFNATLIYTSNE 258

Query: 368 GEKF-AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRS 403
             +F                 + D ++   ++SP+GR 
Sbjct: 259 DGEFAQAYAYDIADKAHNRTTQADWDVMYVSYSPNGRY 296



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 3/143 (2%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           ++      ++S   + ++  SD+ G    Y +   G D   ++     + F   + P G 
Sbjct: 51  SMANPDGLAFSEGRTHVLISSDKTGVFNAYALPVAGGDPVPLTASTTNATFAQSYFPDGR 110

Query: 360 LIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS 416
            +      G      I V + DG+   L   D        +S  G++   +  +      
Sbjct: 111 RVLVAADQGGNELTHIYVREIDGTLRDLTPGDKLKAGFVGFSDDGQTFWLTSNERDAQVF 170

Query: 417 KLYSIDLNGRNETLINTPAYASD 439
            LY+ D       L+       D
Sbjct: 171 DLYAYDAATYERKLMFQNPGGMD 193


>gi|78222428|ref|YP_384175.1| NACHT nucleoside triphosphatase [Geobacter metallireducens GS-15]
 gi|78193683|gb|ABB31450.1| NACHT nucleoside triphosphatase [Geobacter metallireducens GS-15]
          Length = 1416

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 100/307 (32%), Gaps = 40/307 (13%)

Query: 129  RLWDVKDRKQ---IIGKKF-----FSSPASWRKIAHTISDDIYQSITGEKGD------FN 174
            RLWD +  ++   I G  +       +P     ++ +  D   ++     G+       +
Sbjct: 948  RLWDPETGQERGIIWGHTYGINALAVTPDGQTLLSASF-DRTIKAWNPANGELRRAFEGH 1006

Query: 175  SRILFVSESVV------SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            SR +             SG    +L   D       +        +     SP+ +++  
Sbjct: 1007 SRQVLAVAVTPDGRQFVSGSEDCTLKRWDLAEGTELWTYYGHTDGVSSVTVSPDGREIVS 1066

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             ++D      +   D    RA + +      + A   + +G    +S  +D  + ++++ 
Sbjct: 1067 GSWD----FTLRRWDLEQPRAREVLRGHTFKVSAAAITPDGAT-AVSAAQDTTLKVWNLA 1121

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
              + +   LT       +A ++P  ++ V  S      ++ V  +    +       E  
Sbjct: 1122 GATASP-PLTGHGATVTAAVFTPSGNRFVTAS---WDRKIKVWGAATGAEIFSLTGHETW 1177

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS----PSGRSL 404
              D   +P G   A T        +     D  + R L       A  WS    P GR  
Sbjct: 1178 VRDVAITPDGRR-AVTASHDRTVRVW----DLEERRELWVFRGHDAEVWSVVVTPDGRR- 1231

Query: 405  IFSRKKD 411
             FS  +D
Sbjct: 1232 AFSAGQD 1238



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/237 (12%), Positives = 75/237 (31%), Gaps = 14/237 (5%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + VS     +L V +  GA            +    F+P+  +   A++D +    + + 
Sbjct: 1105 TAVSAAQDTTLKVWNLAGATASPPLTGHGATVTAAVFTPSGNRFVTASWDRK----IKVW 1160

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                      +    + +     + +G+R  ++   D  + ++ ++ +            
Sbjct: 1161 GAATGAEIFSLTGHETWVRDVAITPDGRR-AVTASHDRTVRVWDLE-ERRELWVFRGHDA 1218

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S   +PD  +  F + ++    L            ++    +       SP G L+A
Sbjct: 1219 EVWSVVVTPDGRR-AFSAGQDAT--LREWDLETFQPLGVT-GLPSPARVTDVSPDGTLLA 1274

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                    F I  ++    +    +    +    + P G  ++ +     D   KL+
Sbjct: 1275 LVAHFPT-FIIRDLRAGSLRPYPPLHRDQVNDCVFLPDGLRVLTASS---DRTLKLW 1327



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/325 (14%), Positives = 98/325 (30%), Gaps = 40/325 (12%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
             +          RLWD +  + ++  +  + P S    A               G +   
Sbjct: 894  RRIASGSRDATVRLWDTETGECLLILRGHTLPVSSLAAA-------------PDGSWL-- 938

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                     SG   N + + D +    R +       +     +P+ Q +  A++D    
Sbjct: 939  --------ASGSWDNVVRLWDPETGQERGIIWGHTYGINALAVTPDGQTLLSASFDR--- 987

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              +   +       +        +LA   + +G++  +S  +D  +  +  DL    TE 
Sbjct: 988  -TIKAWNPANGELRRAFEGHSRQVLAVAVTPDGRQ-FVSGSEDCTLKRW--DLAEG-TEL 1042

Query: 297  LTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             T     +   S + SPD  +IV  S       L          + + +           
Sbjct: 1043 WTYYGHTDGVSSVTVSPDGREIVSGS---WDFTLRRWDLEQPRAREVLRGHTFKVSAAAI 1099

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            +P G   A +        +  +    +   L    + + A  ++PSG   + +     D 
Sbjct: 1100 TPDG-ATAVSAAQDTTLKVWNLAGATASPPLTGHGATVTAAVFTPSGNRFVTASW---DR 1155

Query: 415  GSKLYSIDLNGRNETLINTPAYASD 439
              K++         +L     +  D
Sbjct: 1156 KIKVWGAATGAEIFSLTGHETWVRD 1180



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 69/225 (30%), Gaps = 16/225 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              +G +K +   + + G  I  +  +    +     +P+ ++         D   + + D
Sbjct: 812  RGNGWLKPATPSLYQAGGAIERILGTHTHPVRGVAITPDGRR----AISAADDATLRVWD 867

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLF 302
                     +    S +LA     +G+R   S  +D  + ++  D ++      L     
Sbjct: 868  LASGAELMVLKGHESEVLAVAVFPDGRRIA-SGSRDATVRLW--DTETGECLLILRGHTL 924

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S + +PD S +   S       + +       ++ I             +P G  + 
Sbjct: 925  PVSSLAAAPDGSWLASGS---WDNVVRLWDPETGQERGIIWGHTYGINALAVTPDGQTLL 981

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
               F      I        + R   E     + A   +P GR  +
Sbjct: 982  SASFDRT---IKAWNPANGELRRAFEGHSRQVLAVAVTPDGRQFV 1023



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 71/228 (31%), Gaps = 18/228 (7%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
               +S     +L V D        +    +  +      P+ +++A  + D      V L
Sbjct: 852  RRAISAADDATLRVWDLASGAELMVLKGHESEVLAVAVFPDGRRIASGSRD----ATVRL 907

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--N 299
             DT        +      + +   + +G     S   D  + ++  D ++     +   +
Sbjct: 908  WDTETGECLLILRGHTLPVSSLAAAPDGSWLA-SGSWDNVVRLW--DPETGQERGIIWGH 964

Query: 300  TLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            T  IN  A  +PD   ++  S DR     +        + +R  +           +P G
Sbjct: 965  TYGINALAV-TPDGQTLLSASFDRT----IKAWNPANGELRRAFEGHSRQVLAVAVTPDG 1019

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
                            +   +G++          + + T SP GR ++
Sbjct: 1020 RQFVSGSEDCTLKRWDL--AEGTELWTYYGHTDGVSSVTVSPDGREIV 1065



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 55/161 (34%), Gaps = 13/161 (8%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+   +A   +    I+R    D R           R  +    F  +G R L +   D
Sbjct: 1267 SPDGTLLALVAHFPTFIIR----DLRAGSLRPYPPLHRDQVNDCVFLPDGLRVL-TASSD 1321

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              + ++ +         L        S S +PD  + V  SD    ++  ++    + + 
Sbjct: 1322 RTLKLWHL-TTGQVMYTLRGHNREIWSVSVTPDGRRAVSASD----DRSLILWDLEALKP 1376

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              +   + +      +P G  +       E  A+ +++ +G
Sbjct: 1377 LATFTGDGALVPAAITPDGKTVV---TGDEAGAVHLLRAEG 1414


>gi|218439541|ref|YP_002377870.1| hypothetical protein PCC7424_2588 [Cyanothece sp. PCC 7424]
 gi|218172269|gb|ACK71002.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 1188

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 90/274 (32%), Gaps = 26/274 (9%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           ++I H    D YQS+       ++  + +         KN L + +      +    +  
Sbjct: 605 QQIVHF---DCYQSLAQSGIFNDTGEMVILAY----KNKNCLRIFNTKTGQCQKTFETET 657

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             L     S + Q +A       +   + +      R  K +    S I    FS +G+ 
Sbjct: 658 GSLTSLAISSDNQFLA----SGSNNSTIEIWSVSSGRCVKVLQGHTSGINCLSFSPDGQF 713

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
              +   D  + I+SV       + L  +T  IN   S+SPD     F +       + +
Sbjct: 714 LA-TGSHDSTVRIWSVS-SGRCVKVLQGHTSGINC-LSFSPDGQ---FLASGSHDSTVRI 767

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVE 388
              +        Q   +      +SP G  +A          + +      Q  + L   
Sbjct: 768 WSVSTGQCLEHLQGHTSGINCLSFSPDGQFLATGSHDST---VRIWSVSTGQCFKYLPTH 824

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + + +++   + L  S   +     K++S++
Sbjct: 825 VGGVHSLSFTSDSQFLAVS---NSKFSVKIWSLN 855



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 94/263 (35%), Gaps = 22/263 (8%)

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
            T   G  +      S+ +     K S+ +   + +    +  S  +      FSP+ Q +
Sbjct: 823  THVGGVHSLSFTSDSQFLAVSNSKFSVKIWSLNESRCYRVLHSNKEWSSSLAFSPDNQFL 882

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            A     +   L   L +   ++  +       ++    F+  G   L+S   +  + ++S
Sbjct: 883  A----SNSQTLSFNLWNCNKEQIVQTFEKNTDVVKTVSFNPKGN-ILVSGSNNGEIRLWS 937

Query: 287  VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            +D   N  + L   +    S  +SP    +   S  EG+ QL+ + + G   K +S+  E
Sbjct: 938  LD-SFNCLKILRGHINPICSTIFSPTGHLLA-SSCSEGQIQLWDV-ATGECLKSLSRYSE 994

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-----ERLLVEDSNLQAPTWSPSG 401
                   ++  G L+  + +S     +        +      R+  E   +  P  S   
Sbjct: 995  Q-LQGITFNSTGKLLV-SNYSDGTIKLW--DVATGECLKSLSRIGKEIKTICIP--SQDD 1048

Query: 402  RSLIFSRKKDGDTGSKLYSIDLN 424
            + LI+          +++ I LN
Sbjct: 1049 QHLIYVTDNG---DLEIWDIQLN 1068



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 76/197 (38%), Gaps = 43/197 (21%)

Query: 127  EFRLWDVKDR----------KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            + +LWDV             +Q+ G  F S+          +S+  Y   T +  D  + 
Sbjct: 974  QIQLWDVATGECLKSLSRYSEQLQGITFNSTGKLL------VSN--YSDGTIKLWDVATG 1025

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-----------------PRF 219
                S S + G    ++C+  +D  ++ Y+T + D  +++                   F
Sbjct: 1026 ECLKSLSRI-GKEIKTICIPSQDDQHLIYVTDNGDLEIWDIQLNQCIHSFSVDLIEVASF 1084

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            S + Q +A     D +   + L +    +  K +   +S I A  FSS+  + L S   D
Sbjct: 1085 SQDGQFLA----TDSNNNVIKLWNVNTRQYIKSLPTHKSFICAMTFSSD-NKILSSSSLD 1139

Query: 280  EAMDIYSVDLQSNATER 296
              + ++  DL++   +R
Sbjct: 1140 GEIKLW--DLETGNCQR 1154



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 73/201 (36%), Gaps = 20/201 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G   +++ +            P+    +    F+ + Q +A +         V +    
Sbjct: 800 TGSHDSTVRIWSVSTGQCFKYLPTHVGGVHSLSFTSDSQFLAVS----NSKFSVKIWSLN 855

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFI 303
             R  + + + +    +  FS + +    S  +  + ++++ +      E++  T     
Sbjct: 856 ESRCYRVLHSNKEWSSSLAFSPDNQFLA-SNSQTLSFNLWNCN-----KEQIVQTFEKNT 909

Query: 304 NI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           ++  + S++P  + +V  S+     ++ +   +  +  +I +         ++SP G L+
Sbjct: 910 DVVKTVSFNPKGNILVSGSN---NGEIRLWSLDSFNCLKILRGHINPICSTIFSPTGHLL 966

Query: 362 AFTKFSGEKFAIGVMKKDGSQ 382
           A +   G    I +      +
Sbjct: 967 ASSCSEG---QIQLWDVATGE 984


>gi|85375412|ref|YP_459474.1| prolyl oligopeptidase family protein [Erythrobacter litoralis
           HTCC2594]
 gi|84788495|gb|ABC64677.1| prolyl oligopeptidase family protein [Erythrobacter litoralis
           HTCC2594]
          Length = 691

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 13/136 (9%)

Query: 264 RFSSNGKRALISVQK-------DEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQ 315
            ++++G       +K          +DIY  DL   A E LT      + S   SPD   
Sbjct: 233 AWAADGSAIYFVARKADGDEPTSTNLDIYRSDLDGGAPENLTAGNLATDTSPVPSPDGRY 292

Query: 316 IVFESD-REGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           + + +  R G E     + +      + + ++ D + S+    W+P    +  T      
Sbjct: 293 LAYLAMARPGYESDKLTVMLRDLASGESRALTPDYDRSFHSLAWTPDSRWLVATAQDVLD 352

Query: 371 FAIGVMKKDGSQERLL 386
                +         L
Sbjct: 353 TPAFRIDPQTGAVEKL 368



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 44/112 (39%), Gaps = 14/112 (12%)

Query: 308 SYSPDSSQIVFESDREGKEQ-------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +++ D S I F + +   ++       +Y    +G   + ++    A+   PV SP G  
Sbjct: 233 AWAADGSAIYFVARKADGDEPTSTNLDIYRSDLDGGAPENLTAGNLATDTSPVPSPDGRY 292

Query: 361 IAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
           +A+   +   +      + +      + R L  D +    +  W+P  R L+
Sbjct: 293 LAYLAMARPGYESDKLTVMLRDLASGESRALTPDYDRSFHSLAWTPDSRWLV 344



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 52/169 (30%), Gaps = 10/169 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKN----SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                 +   ++       G         +   D DG     LT         P  SP+ 
Sbjct: 231 DIAWAADGSAIYFVARKADGDEPTSTNLDIYRSDLDGGAPENLTAGNLATDTSPVPSPDG 290

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D L V L D     +     ++     +  ++ + +  + + Q  
Sbjct: 291 RYLAYLAMARPGYESDKLTVMLRDLASGESRALTPDYDRSFHSLAWTPDSRWLVATAQDV 350

Query: 280 EAMDIYSVDLQSNATERLTNTLFINIS-ASYSPD-SSQIVFESDREGKE 326
                + +D Q+ A E+L          A+  P    +++F  D  G  
Sbjct: 351 LDTPAFRIDPQTGAVEKLDLMAGNEAHIANVMPLPGERLLFARDSIGSP 399



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 63/244 (25%), Gaps = 38/244 (15%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-- 292
            + R  L      + P  + +F + +     S  G    +  +       +  D      
Sbjct: 99  QVWRASLEADGSVKGPLPVTDFGTDVDGFSLSPAGDAIAVWAEIARDCPRFGCDGDGTAH 158

Query: 293 ----ATERLTNTLF--------INISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQK 339
                  RL +                ++S      VF  +          +     D  
Sbjct: 159 LPSPGNGRLYDGADGFYRHWDTWETPGTFS---RVFVFGLENGKTVGDGKALDGPPGDGA 215

Query: 340 RISQDKEASYFDP----VWSPQGDLIAFTKF-------SGEKFAIGVMKKDGSQERLLVE 388
            I+ D     F       W+  G  I F          +     I     DG     L  
Sbjct: 216 SITGDTPTKPFGGGEDIAWAADGSAIYFVARKADGDEPTSTNLDIYRSDLDGGAPENLTA 275

Query: 389 D--SNLQAPTWSPSGRSLIF-SRKKDGDTGSKLYSI--DLNGRNETLINTPAYASDP--- 440
              +   +P  SP GR L + +  + G    KL  +  DL       + TP Y       
Sbjct: 276 GNLATDTSPVPSPDGRYLAYLAMARPGYESDKLTVMLRDLASGESRAL-TPDYDRSFHSL 334

Query: 441 QWVG 444
            W  
Sbjct: 335 AWTP 338


>gi|194364869|ref|YP_002027479.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Stenotrophomonas maltophilia R551-3]
 gi|194347673|gb|ACF50796.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Stenotrophomonas maltophilia R551-3]
          Length = 692

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 85/294 (28%), Gaps = 41/294 (13%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            +  SP   R +    S  ++Q+   +      ++    ++  SG + +SL V   D  N
Sbjct: 134 SYHVSPQDDRVL---FSAGVFQACASDLACTEKKLKEKKDAKASGQVFDSLFVRHWDTWN 190

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                  R+ +   P   P            +                            
Sbjct: 191 ----DGRRNTLFVAP--LPAG----------KAGAVKGASALSATIDGDAPSKPFGGNDD 234

Query: 263 PRFSSNGKRALISVQKDE-------AMDIYSVDLQSNA-TERLT-NTLFINISASYSPDS 313
             +S +G   + S++            D+Y  D         LT +    +    +S D 
Sbjct: 235 FAWSPDGASVVASIRVAGKQEPWSTNFDLYRFDAAGKQAPVNLTASNPAWDAGPVFSADG 294

Query: 314 SQIV--------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             +         FE+DR G   L  M  +    + I+   + S      S  G  I  T 
Sbjct: 295 KTLFYRAMKRPGFEADRFG---LMAMDVSSGKTREIAPQWDRSAGGITLSADGSSIYTTA 351

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
               +  +  +     +   L+ D ++ +   +  G S+  +R         L 
Sbjct: 352 DDLGEHPLFQIDVASGKATKLIGDGSVTSVDVA--GTSVAITRNSLKSNDQVLV 403



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 47/255 (18%), Positives = 85/255 (33%), Gaps = 32/255 (12%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILR------VYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           +  P  + +   V +A    +  L+         + TR    PK+I      + +   S+
Sbjct: 36  VSAPVLTADGGTVVFAKRSTDAALKSSTALFARNLRTRDAAPPKQITPAGWNVNSASLSA 95

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------- 319
           +G+       ++ +  +Y+  +   A  +LT+      S   SP   +++F         
Sbjct: 96  DGQTVYFLSARNGSQQLYAQPISGGAPRQLTDFPVDVDSYHVSPQDDRVLFSAGVFQACA 155

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK- 378
           SD    E+    + +     ++  D         W+       F        A  V    
Sbjct: 156 SDLACTEKKLKEKKDAKASGQV-FDSLFVRHWDTWNDGRRNTLFVAPLPAGKAGAVKGAS 214

Query: 379 ------DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNGRN 427
                 DG         ++  A  WSP G S++ S +  G      T   LY  D  G+ 
Sbjct: 215 ALSATIDGDAPSKPFGGNDDFA--WSPDGASVVASIRVAGKQEPWSTNFDLYRFDAAGKQ 272

Query: 428 ETLINTPAYASDPQW 442
             +  T   AS+P W
Sbjct: 273 APVNLT---ASNPAW 284



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 17/153 (11%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQ-------LYVMQSNGSDQKR-ISQDKEASYFDPV 353
             N   ++SPD + +V      GK++       LY   + G      ++    A    PV
Sbjct: 230 GGNDDFAWSPDGASVVASIRVAGKQEPWSTNFDLYRFDAAGKQAPVNLTASNPAWDAGPV 289

Query: 354 WSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIF 406
           +S  G  + +       F  ++F +  M     + R +    +  A   T S  G S+  
Sbjct: 290 FSADGKTLFYRAMKRPGFEADRFGLMAMDVSSGKTREIAPQWDRSAGGITLSADGSSIYT 349

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +    G+    L+ ID+     T +      + 
Sbjct: 350 TADDLGEHP--LFQIDVASGKATKLIGDGSVTS 380



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/309 (16%), Positives = 103/309 (33%), Gaps = 50/309 (16%)

Query: 166 ITGEKG--DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +T + G   F  R    +    + +   +L    RD A  + +TP+   +      S + 
Sbjct: 41  LTADGGTVVFAKRSTDAALKSSTALFARNLRT--RDAAPPKQITPAGWNVNSA-SLSADG 97

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           Q V + +    +  +          AP+++ +F   + +   S    R L S        
Sbjct: 98  QTVYFLS--ARNGSQQLYAQPISGGAPRQLTDFPVDVDSYHVSPQDDRVLFSA---GVFQ 152

Query: 284 IYSVDLQ-----------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             + DL            + A+ ++ ++LF+    +++      +F +            
Sbjct: 153 ACASDLACTEKKLKEKKDAKASGQVFDSLFVRHWDTWNDGRRNTLFVAP---LPAGKAGA 209

Query: 333 SNGSDQKRISQDKE------ASYFDPVWSPQG-DLIAFTKFSGE------KFAIGVMKKD 379
             G+     + D +          D  WSP G  ++A  + +G+       F +      
Sbjct: 210 VKGASALSATIDGDAPSKPFGGNDDFAWSPDGASVVASIRVAGKQEPWSTNFDLYRFDAA 269

Query: 380 GSQ-ERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINT 433
           G Q    L     +    P +S  G++L +   K     +    L ++D++      I  
Sbjct: 270 GKQAPVNLTASNPAWDAGPVFSADGKTLFYRAMKRPGFEADRFGLMAMDVSSGKTREIA- 328

Query: 434 PAYASDPQW 442
                 PQW
Sbjct: 329 ------PQW 331


>gi|196232029|ref|ZP_03130884.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
 gi|196223751|gb|EDY18266.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
          Length = 945

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 57/370 (15%), Positives = 113/370 (30%), Gaps = 68/370 (18%)

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK------------------EGKDRLRV 126
           +    +I  P+ +   Q W   GA   V  +V                        +   
Sbjct: 138 NKVGAEILKPEEVALLQAWIDEGATGTVKAKVRPVKWHPLPPGLHPILAVAVSPDGQYAA 197

Query: 127 -----EFRLWDVKDRKQIIGKKF-----FSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                +  ++ V   + +           S  + WR  A                DF   
Sbjct: 198 CGRANQIFIYHVPTGQTVARLTDPKLADKSGRSGWRSSAQR--------------DFVQS 243

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           ++F  +  V    +  +  + R   N+   T   +        SP+ + +A A  D+   
Sbjct: 244 LVFSPDGKVLASGEYRMVKLWRREPNLPQFTLGAEPATAL-ALSPDGKFIATAAKDN--- 299

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATE 295
             + + D+   +  K +    + + A RFS + KR            I   DL +   T 
Sbjct: 300 -VIRIWDSAAGKQLKELAGHSATVNALRFSPDNKRLA---SGGADKTIRVWDLTTGQNTT 355

Query: 296 RLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-----ASY 349
           ++       +SA ++  D  Q+       G + + +     +    ++Q KE        
Sbjct: 356 QV--EAATEVSALAWVRDGKQLA---SAGGDKSVRLWDIPTAADAPLTQAKELTGHTQPV 410

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              V S  G  +      G      V      Q R +   + + A   SP+ ++L     
Sbjct: 411 TALVASSDGKQLFSGSSDGSVRQWAVDSA--KQVRQMDHGAPITALALSPNNKTLA---- 464

Query: 410 KDGDTGSKLY 419
             G   ++++
Sbjct: 465 TAGGNHARIW 474



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 75/191 (39%), Gaps = 11/191 (5%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           DF+    +++           + + +  DGA +R + PS    +F  RFSP+ + +A  +
Sbjct: 724 DFSPDGKWIATGGGMPSRNGEVKIWNAADGALVREINPSHSDTVFSVRFSPDGKLLATGS 783

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D      V + DT   +  K I      +L   + + G+    S   D+ + +++    
Sbjct: 784 ADK----FVKVFDTASGKLVKSISGHTHYVLCVSWRATGREIA-SSGADKTVKLWAFP-S 837

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
               + + +      S  +     +++  S   G  ++ +++ +G +  R     +   F
Sbjct: 838 GEQIKSIEDFKKEVTSVRFVGYGGELLTAS---GDNRVRMLKEDGGNL-REYGGSKGFIF 893

Query: 351 DPVWSPQGDLI 361
               +P G +I
Sbjct: 894 STALTPDGKII 904



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 108/296 (36%), Gaps = 34/296 (11%)

Query: 160 DDIYQSITGEKGD-FNS---------RILFVSESVVSGIIKNSLCVMDRDGAN---IRYL 206
           D I  + + E G  F++          + + ++  +    + +  ++ R G N    R +
Sbjct: 648 DQIVHTWSAENGAGFDTFPSQLGGVQALAYAADGRIISAAEKNGAIVWRSGPNWTLARTI 707

Query: 207 TPSRDQILFEPR-----FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMI 260
               ++     R     FSP+ + +A           V + +       + I  +    +
Sbjct: 708 GTGDEKSPLSNRVVALDFSPDGKWIATGGGMPSRNGEVKIWNAADGALVREINPSHSDTV 767

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
            + RFS +GK    +   D+ + ++  D  S    + ++      +  S+     +I   
Sbjct: 768 FSVRFSPDGKLLA-TGSADKFVKVF--DTASGKLVKSISGHTHYVLCVSWRATGREIA-S 823

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S  +   +L+    +G   K I   K+           G+L+     +     + ++K+D
Sbjct: 824 SGADKTVKLWAF-PSGEQIKSIEDFKKEVTSVRFVGYGGELL----TASGDNRVRMLKED 878

Query: 380 GSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           G   R        + +   +P G+ ++       D+  ++++   NG+N   ++ P
Sbjct: 879 GGNLREYGGSKGFIFSTALTPDGKIIL---GGGQDSVLRIWNA-ANGKNLFSLDPP 930



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 77/218 (35%), Gaps = 32/218 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   VA A  D      V+              +    + A  ++++G R + + +
Sbjct: 634 AFSPDGLTVATAGEDQ----IVHTWSAENGAGFDTFPSQLGGVQALAYAADG-RIISAAE 688

Query: 278 KDEAMDIYSVDLQSNATERL--TNTLFINISA--------SYSPDSSQIVFES---DREG 324
           K+ A+       +S     L  T       S          +SPD   I        R G
Sbjct: 689 KNGAIV-----WRSGPNWTLARTIGTGDEKSPLSNRVVALDFSPDGKWIATGGGMPSRNG 743

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + +++   ++G+  + I+     + F   +SP G L+A    S +KF + V      +  
Sbjct: 744 EVKIWNA-ADGALVREINPSHSDTVFSVRFSPDGKLLA--TGSADKF-VKVFDTASGKLV 799

Query: 385 LLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +          +W  +GR +        D   KL++
Sbjct: 800 KSISGHTHYVLCVSWRATGREIA---SSGADKTVKLWA 834



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 58/180 (32%), Gaps = 29/180 (16%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           DT +++A K   +    + A  FS +G     +  +D+ +  +S +          N   
Sbjct: 613 DTEVEKAKKAATDAEKAVRAVAFSPDGLTVA-TAGEDQIVHTWSAE----------NGAG 661

Query: 303 INISASYSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDP------ 352
            +   S       + + +D       ++   ++  +G +              P      
Sbjct: 662 FDTFPSQLGGVQALAYAADGRIISAAEKNGAIVWRSGPNWTLARTIGTGDEKSPLSNRVV 721

Query: 353 --VWSPQGDLIAFTK---FSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLI 405
              +SP G  IA          +  I     DG+  R +       + +  +SP G+ L 
Sbjct: 722 ALDFSPDGKWIATGGGMPSRNGEVKIW-NAADGALVREINPSHSDTVFSVRFSPDGKLLA 780


>gi|170099698|ref|XP_001881067.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164643746|gb|EDR07997.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 679

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 78/201 (38%), Gaps = 43/201 (21%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSN-ATERLTN 299
             +P++I +   +    + S +G+R L  VQ            ++  +  S  +  +LTN
Sbjct: 11  SHSPEKIASSPKI-RDVKISPDGRRILYQVQPFYRVSEITTSQLWLAETDSAYSARQLTN 69

Query: 300 TLFINISASYSPDSSQIVFESDRE--GK-EQLYVMQSN-----GSDQKRISQDKEA-SYF 350
             F + +  + PD  ++ F SDR+  GK   ++VM         S+    S+  E  +  
Sbjct: 70  GDFNDRAGVWHPDGKRVFFLSDRDEAGKAGHIFVMTIGREGQIESEATAFSKGFEEKNVQ 129

Query: 351 DPVWSPQGDLIAFT-------------KFSGEKFAIGVMKKDGSQERL------------ 385
               SP G+ +AF              +    +  +   K D ++ +L            
Sbjct: 130 KFEISPDGNFVAFVVAGDKVDGKSRHRQQLKGEPKVFGAKADLARLKLFDFRTGIVPKVP 189

Query: 386 -LVEDSNLQAPTWSPSGRSLI 405
            +  D ++++  WSP  + L+
Sbjct: 190 SMFADKHVESFAWSPDSKELL 210



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 19/115 (16%)

Query: 310 SPDSSQIVFESDREGK------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD  +I+++     +       QL++ +++ +   R   + + +    VW P G  + F
Sbjct: 29  SPDGRRILYQVQPFYRVSEITTSQLWLAETDSAYSARQLTNGDFNDRAGVWHPDGKRVFF 88

Query: 364 TKFS---GEKFAIGVMKKDGSQERLLVEDS---------NLQAPTWSPSGRSLIF 406
                  G+   I VM   G + ++  E +         N+Q    SP G  + F
Sbjct: 89  LSDRDEAGKAGHIFVMTI-GREGQIESEATAFSKGFEEKNVQKFEISPDGNFVAF 142



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 9/84 (10%)

Query: 354 WSPQGDLIAF--------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            SP G  I +        ++ +  +  +       S  +L   D N +A  W P G+ + 
Sbjct: 28  ISPDGRRILYQVQPFYRVSEITTSQLWLAETDSAYSARQLTNGDFNDRAGVWHPDGKRVF 87

Query: 406 FSRKKD-GDTGSKLYSIDLNGRNE 428
           F   +D       ++ + +    +
Sbjct: 88  FLSDRDEAGKAGHIFVMTIGREGQ 111



 Score = 43.5 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 69/245 (28%), Gaps = 40/245 (16%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD--EDILRV 239
              VS I  + L + + D A       + D       + P+ ++V + +  D       +
Sbjct: 42  FYRVSEITTSQLWLAETDSAYSARQLTNGDFNDRAGVWHPDGKRVFFLSDRDEAGKAGHI 101

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR------FSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           ++M    +   +      S     +       S +G      V  D       VD +S  
Sbjct: 102 FVMTIGREGQIESEATAFSKGFEEKNVQKFEISPDGNFVAFVVAGD------KVDGKSRH 155

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDP 352
            ++L                   VF +  +   +L +         ++ S   +      
Sbjct: 156 RQQL--------------KGEPKVFGAKAD-LARLKLFDFRTGIVPKVPSMFADKHVESF 200

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVM---------KKDGSQERLLVEDSNLQAPTWSPSGRS 403
            WSP    +       +      M           D   ++        + P  +PSG +
Sbjct: 201 AWSPDSKELLCRLLENKGAEFAEMEVIMERVAISADEKGQQNATGVVVSRYPR-APSGPT 259

Query: 404 LIFSR 408
           +  S 
Sbjct: 260 IWLSS 264


>gi|325270913|ref|ZP_08137500.1| dipeptidyl peptidase IV [Prevotella multiformis DSM 16608]
 gi|324986710|gb|EGC18706.1| dipeptidyl peptidase IV [Prevotella multiformis DSM 16608]
          Length = 750

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 91/307 (29%), Gaps = 70/307 (22%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDEDI 236
            N L V D  G+  +  T     I++                +SP   ++A+   D   +
Sbjct: 177 DNQLYVTDAKGSKHQLTTDGSRNIVYGQSVHRDEFGIDGGLYWSPKGNRLAFYRMDQSGV 236

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAP--------------------------------- 263
               L+D          G  R+   AP                                 
Sbjct: 237 ADYPLVDIPELDWTPEKGESRAAKAAPIKYPMAGETSHKVTVGVYDLTSGKTVYLQAGDP 296

Query: 264 --------RFSSNGKRAL-ISVQKDEAM-DIYSVDLQSN----ATERLTNTLFINISA-- 307
                    +S + K      + +D+    + S D  +        R T+  +  +    
Sbjct: 297 TDRYFTNIAWSPDEKTVYMFELNRDQNDCRLVSYDAATGAKLKELYRETDAKY--VEPCH 354

Query: 308 --SYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              + P + ++ V +S ++G   LY+    G   ++++  K        ++ +   I + 
Sbjct: 355 PVRFLPWNDNEFVMQSQKDGYNHLYLFDKEGRLIRQLTSGKWVVLDVLGFNAKQKSIVYV 414

Query: 365 KF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               S  +  + ++     +  LL        P  S  G  LI     + D   K   I 
Sbjct: 415 SNECSPIQRNVWLVNVATGKRTLLDNGRGYHYPKLSEDGSVLI-DSYSEPDVPRKYELIT 473

Query: 423 LNGRNET 429
           L G+ + 
Sbjct: 474 LKGKPQR 480



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 76/209 (36%), Gaps = 14/209 (6%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT----PSRDQILFEPRFSPN 222
           T EKG+  +      +  ++G   + + V   D  + + +        D+      +SP+
Sbjct: 250 TPEKGESRAAKAAPIKYPMAGETSHKVTVGVYDLTSGKTVYLQAGDPTDRYFTNIAWSPD 309

Query: 223 QQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL----AP-RFSS-NGKRALIS 275
           ++ V  +    D++  R+   D       K +             P RF   N    ++ 
Sbjct: 310 EKTVYMFELNRDQNDCRLVSYDAATGAKLKELYRETDAKYVEPCHPVRFLPWNDNEFVMQ 369

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQS 333
            QKD    +Y  D +     +LT+  ++  ++   ++     IV+ S+     Q  V   
Sbjct: 370 SQKDGYNHLYLFDKEGRLIRQLTSGKWVVLDVLG-FNAKQKSIVYVSNECSPIQRNVWLV 428

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           N +  KR   D    Y  P  S  G ++ 
Sbjct: 429 NVATGKRTLLDNGRGYHYPKLSEDGSVLI 457


>gi|300869605|ref|ZP_07114185.1| putative Serine/Threonine protein kinase with WD40 repeats
           [Oscillatoria sp. PCC 6506]
 gi|300332383|emb|CBN59385.1| putative Serine/Threonine protein kinase with WD40 repeats
           [Oscillatoria sp. PCC 6506]
          Length = 714

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 82/263 (31%), Gaps = 40/263 (15%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    ++ + +     +    P     +     SP+ Q VA           + L   
Sbjct: 467 VSGSSDETIKLWNLHSGELLGTLPGHSIGVNSVAISPDGQLVASC---GGSDYTIKLWHL 523

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 + +      + A  FS +G+    S   D    ++  D+++   +R  + L + 
Sbjct: 524 DSGELLRTLTGHLDDVNAVVFSPDGQVLA-SGSSDATSKVW--DVETGELQRTLSGLNLG 580

Query: 305 I-SASYSPDSSQIVFESD----------------------REGKEQLYVMQSNGSDQKRI 341
           + S + SPD   +V   +                      R+G +   V  S+  +   I
Sbjct: 581 VNSIAISPDGQTLVSVRNDYTIKLRNLPTGRLMRILSNNQRKGND---VGNSSRGNAPHI 637

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSP 399
            ++          SP G  +A          I +      Q    L      + +   + 
Sbjct: 638 LRNYVGRGNSVAISPDGLTLASGSDDNT---IKIWNVATGQLMNTLTGHSGTVYSVAIAR 694

Query: 400 SGRSLIFSRKKDGDTGSKLYSID 422
            G+ L+      GD   K++  D
Sbjct: 695 DGKLLV---SGSGDETIKIWRCD 714



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/264 (12%), Positives = 75/264 (28%), Gaps = 46/264 (17%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + + +   +          +     S + + +   + D+     + L +  
Sbjct: 426 SGSWDRTIKLWNLETGELTTTLTGHSDRVNSVAISSDGELLVSGSSDE----TIKLWNLH 481

Query: 246 IDRAPKRIGNFRSMIL---APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                + +G      +   +   S +G+        D  + ++ +D        LT  L 
Sbjct: 482 SG---ELLGTLPGHSIGVNSVAISPDGQLVASCGGSDYTIKLWHLD-SGELLRTLTGHLD 537

Query: 303 INISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              +  +SPD   +    SD   K    V      + +R              SP G  +
Sbjct: 538 DVNAVVFSPDGQVLASGSSDATSK----VWDVETGELQRTLSGLNLGVNSIAISPDGQTL 593

Query: 362 AFTKFSGEKFAIGVMK-KDGSQERLLVED-----------------------SNLQAPTW 397
              +     + I +     G   R+L  +                           +   
Sbjct: 594 VSVRND---YTIKLRNLPTGRLMRILSNNQRKGNDVGNSSRGNAPHILRNYVGRGNSVAI 650

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSI 421
           SP G +L        D   K++++
Sbjct: 651 SPDGLTLASGSD---DNTIKIWNV 671



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 71/194 (36%), Gaps = 13/194 (6%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           + T+  +    +    S + +   S +G   L S   D  + +++++     T    ++ 
Sbjct: 394 IKTKTWQCVCTLPGHSSFVNSIAISPDG-LILASGSWDRTIKLWNLETGELTTTLTGHSD 452

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +N S + S D   +V  S     E + +   +  +                 SP G L+
Sbjct: 453 RVN-SVAISSDGELLVSGSS---DETIKLWNLHSGELLGTLPGHSIGVNSVAISPDGQLV 508

Query: 362 AFTKFSGEKFAIGVMKKDGSQE-RLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           A     G  + I +   D  +  R L     ++ A  +SP G+ L        D  SK++
Sbjct: 509 A--SCGGSDYTIKLWHLDSGELLRTLTGHLDDVNAVVFSPDGQVLA---SGSSDATSKVW 563

Query: 420 SIDLNGRNETLINT 433
            ++  G  +  ++ 
Sbjct: 564 DVE-TGELQRTLSG 576


>gi|295132225|ref|YP_003582901.1| dipeptidyl-peptidase IV family protein [Zunongwangia profunda
           SM-A87]
 gi|294980240|gb|ADF50705.1| secreted dipeptidyl-peptidase IV family protein [Zunongwangia
           profunda SM-A87]
          Length = 793

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 77/203 (37%), Gaps = 25/203 (12%)

Query: 256 FRSMILAPR-FSSNGKRALISVQKDEAMDIYS--VDLQSNATERL--------TNTLFIN 304
            R +I +P  FS NG++A++S++  +  D +   + L+  +   L             + 
Sbjct: 331 VREVITSPAYFSENGEKAIVSIRSKDNKDRWIAQLHLEDGSLTVLDRQRDEAWIAGPGLG 390

Query: 305 ISAS-----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            S       + PD+  I F+S+  G   LYV+  +  ++K ++   +   FDP  S    
Sbjct: 391 WSFGGGTLGWLPDNKHIYFQSEATGYSHLYVLNVDNGEKKDLTP-GDYEVFDPELSNNKK 449

Query: 360 --LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDTG 415
              +  +K   +      M   G +   L   +       SP  +   + +S     +  
Sbjct: 450 YWYLTTSKEGPDVRHFYKMPVMGGKMEKLTNMTGNNQVYLSPDEKYMAIYYSYS---NKP 506

Query: 416 SKLYSIDLN-GRNETLINTPAYA 437
            +LY      G  + L +  + A
Sbjct: 507 WELYLKKTGKGEAKQLTSGQSEA 529


>gi|145547002|ref|XP_001459183.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427007|emb|CAK91786.1| unnamed protein product [Paramecium tetraurelia]
          Length = 667

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 90/245 (36%), Gaps = 18/245 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++ SG   NS+ + +      +         +    FSPN  K+A  + D      + L
Sbjct: 396 MTLSSGSDDNSIRLWNVKSGQQKVKLDGHTCGVNSVCFSPNGTKLASGSIDK----SIRL 451

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNT 300
            D +      ++    + + +  FSS+G     S   D+++ ++  DL++     RL   
Sbjct: 452 WDVKRGLQTAKLDGHSNSVQSVCFSSDGATLA-SGSIDKSIRLW--DLKTGLQAARLDGH 508

Query: 301 LFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQG 358
                S  +SP+ + +   S +  G +    +       +    D  +S  + V +S  G
Sbjct: 509 TNGVNSVCFSPNGTNLASGSGESNGNDNSVRLWDIRKKVQIAKFDGHSSKVNSVCFSHDG 568

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             IA   +      I +   +    +  ++   + + +  +SP+   L        D   
Sbjct: 569 SKIASGSYDSS---ICLWDVETRSLKAKLDGHSNGVNSVCFSPNSTQLA---SGSSDKSI 622

Query: 417 KLYSI 421
           +L+ +
Sbjct: 623 RLWDV 627



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 76/240 (31%), Gaps = 31/240 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            K     +    RLWDVK   Q                 H  S+ +        G     
Sbjct: 438 TKLASGSIDKSIRLWDVKRGLQTAKLD-----------GH--SNSVQSVCFSSDGA---- 480

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDED 235
                 ++ SG I  S+ + D                +    FSPN   +A  +   + +
Sbjct: 481 ------TLASGSIDKSIRLWDLKTGLQAARLDGHTNGVNSVCFSPNGTNLASGSGESNGN 534

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              V L D R      +     S + +  FS +G +   S   D ++ ++  D+++ + +
Sbjct: 535 DNSVRLWDIRKKVQIAKFDGHSSKVNSVCFSHDGSKIA-SGSYDSSICLW--DVETRSLK 591

Query: 296 RLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
              +     + S  +SP+S+Q+   S     + + +       Q          Y    W
Sbjct: 592 AKLDGHSNGVNSVCFSPNSTQLASGSS---DKSIRLWDVKTGQQLAKFNSHNRQYISIKW 648



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 70/260 (26%), Gaps = 38/260 (14%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             RLW+VK  +Q +               HT    +        G            + S
Sbjct: 406 SIRLWNVKSGQQKVKLD-----------GHTC--GVNSVCFSPNG----------TKLAS 442

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G I  S+ + D                +    FS +   +A  + D      + L D + 
Sbjct: 443 GSIDKSIRLWDVKRGLQTAKLDGHSNSVQSVCFSSDGATLASGSIDK----SIRLWDLKT 498

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTLFINI 305
                R+    + + +  FS NG     S   +   +  SV L       ++      + 
Sbjct: 499 GLQAARLDGHTNGVNSVCFSPNGTNLA-SGSGESNGNDNSVRLWDIRKKVQIAKFDGHSS 557

Query: 306 ---SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S  +S D S+I   S       + +        K              +SP    +A
Sbjct: 558 KVNSVCFSHDGSKIASGSY---DSSICLWDVETRSLKAKLDGHSNGVNSVCFSPNSTQLA 614

Query: 363 FTKFSGEKFAIGVMKKDGSQ 382
                     I +      Q
Sbjct: 615 SGSSDKS---IRLWDVKTGQ 631


>gi|255531331|ref|YP_003091703.1| hypothetical protein Phep_1427 [Pedobacter heparinus DSM 2366]
 gi|255344315|gb|ACU03641.1| hypothetical protein Phep_1427 [Pedobacter heparinus DSM 2366]
          Length = 936

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 97/276 (35%), Gaps = 19/276 (6%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVS----GIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           + Y ++       ++  L V  +  +       K  +      G + +           +
Sbjct: 296 ENYSALNKPSSYASNYFLPVRLTANTILTLKQSKADVPQFTVIGKDRKETRLLNIGPQEQ 355

Query: 217 PRFSPNQQKVAY--ATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKRA 272
           P +S     + +    YD     R Y +    D   K +   + +S + +P  S++GK+ 
Sbjct: 356 PWYSYANGLIVWDEIRYDPRYRQRSYSVICSYDMKYKLVKKLSSKSRLFSPSLSADGKKI 415

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDREGKEQL 328
            I+V+ D +     V+L +   + L            + S+S D   + + S  E  + L
Sbjct: 416 -IAVRFDLSNQCNLVELDAGNGKLLYTYPNPENLILQTPSFSEDGHTVTYISVSEQGKAL 474

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +    +G  ++ I+  ++              IAF         I  +     +   L +
Sbjct: 475 WTSNRSGQTRQLIAPSQQQITRPIFI---DQQIAFNAHYSGVDNIYSVDIQSKKISALSD 531

Query: 389 -DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  P++S S  ++IF+    G  G ++  + L
Sbjct: 532 AKYGAFNPSFSKSSSTVIFNNYMPG--GYEVAEMSL 565



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 69/186 (37%), Gaps = 14/186 (7%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGII-------KNSLCVMDRDGANIRYLTPSR 210
           I     +    +K    SR+   S S     I        N   +++ D  N + L    
Sbjct: 384 ICSYDMKYKLVKKLSSKSRLFSPSLSADGKKIIAVRFDLSNQCNLVELDAGNGKLLYTYP 443

Query: 211 DQ---ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           +    IL  P FS +   V Y +  ++   +      R  +  + I   +  I  P F  
Sbjct: 444 NPENLILQTPSFSEDGHTVTYISVSEQG--KALWTSNRSGQTRQLIAPSQQQITRPIF-- 499

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
             ++   +       +IYSVD+QS     L++  +   + S+S  SS ++F +   G  +
Sbjct: 500 IDQQIAFNAHYSGVDNIYSVDIQSKKISALSDAKYGAFNPSFSKSSSTVIFNNYMPGGYE 559

Query: 328 LYVMQS 333
           +  M  
Sbjct: 560 VAEMSL 565


>gi|157373589|ref|YP_001472189.1| peptidase [Shewanella sediminis HAW-EB3]
 gi|157315963|gb|ABV35061.1| peptidase [Shewanella sediminis HAW-EB3]
          Length = 678

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 65/186 (34%), Gaps = 8/186 (4%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               FS++G+  L+   +    ++Y +D+ S     LTN        S+ P+  +++   
Sbjct: 79  FGSSFSADGRSILMGSDETGIFNLYKMDVASGNKVALTNFKDTTYPISWFPNDDRVLLTQ 138

Query: 321 DREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVM 376
           D  G     L+V + +G+    ++  +        ++  G+    T      +   +   
Sbjct: 139 DNGGNELYHLFVREIDGT-ITDLTDSENTRANFVNFTNDGEFFYATTNERDPKFMDLYRY 197

Query: 377 KKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                +  L+ ++    +    SP G  L  ++       S  Y +D   R        +
Sbjct: 198 DAKTYKRTLVFKNELGFEISEVSPDGYFLSLAKTHTNR-DSDTYLLDFRKRTLKPTLI-S 255

Query: 436 YASDPQ 441
              DP 
Sbjct: 256 EHQDPA 261



 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 1/93 (1%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS 400
           +  +  +YF   +S  G  I         F +  M      +  L    +   P +W P+
Sbjct: 71  TFFETTTYFGSSFSADGRSILMGSDETGIFNLYKMDVASGNKVALTNFKDTTYPISWFPN 130

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              ++ ++   G+    L+  +++G    L ++
Sbjct: 131 DDRVLLTQDNGGNELYHLFVREIDGTITDLTDS 163


>gi|302552027|ref|ZP_07304369.1| protease [Streptomyces viridochromogenes DSM 40736]
 gi|302469645|gb|EFL32738.1| protease [Streptomyces viridochromogenes DSM 40736]
          Length = 1086

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 68/204 (33%), Gaps = 16/204 (7%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++L          R+   R+     RFS +G+    +  +    +++ + +      +L+
Sbjct: 22  LWLAPLDSPGRAWRLTVDRTRTGPARFSPDGRHLAYTNWRSLVPEVHLLPVDGGPARQLS 81

Query: 299 NTLFINISAS-YSPDSSQIVFESDREGKEQL---YVMQSNGSDQKRISQDKEASYFDPVW 354
           +   I+     ++PD   +   S  E        Y +  +G   +++     A       
Sbjct: 82  HWGSIDTRVCGWTPDGEILAVASHGEPFSYFTWAYKVSPDGDPGRKLPWGPVADIQVADI 141

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--------DSNLQAPTWSPSGRSLIF 406
             +   +  T     + A     + G+  RL +           +L +P +   G  + F
Sbjct: 142 GTERRSLLLTGTPPHEPASWKRYRGGATGRLWLHGERLLAGLGGHLHSPMFV--GGRIAF 199

Query: 407 SRKKDGDTGSKLYSIDLNGRNETL 430
               +G     LYS   +G +   
Sbjct: 200 LSDHEG--VGNLYSCAYDGSDLRR 221



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 6/111 (5%)

Query: 281 AMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             D++   L S     RLT        A +SPD   + + + R    +++++  +G   +
Sbjct: 19  EDDLWLAPLDSPGRAWRLTVDRTRTGPARFSPDGRHLAYTNWRSLVPEVHLLPVDGGPAR 78

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI----GVMKKDGSQERLL 386
           ++S           W+P G+++A     GE F+       +  DG   R L
Sbjct: 79  QLSHWGSIDTRVCGWTPDGEILAVASH-GEPFSYFTWAYKVSPDGDPGRKL 128



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 76/241 (31%), Gaps = 19/241 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +   D     +            RFSP+ + +AY  +    +  V+L+        +
Sbjct: 21  DLWLAPLDSPGRAWRLTVDRTRTGPARFSPDGRHLAYTNWR-SLVPEVHLLPVD-GGPAR 78

Query: 252 RIGNFRSMILAPR-FSSNGKRALISVQKDE---AMDIYSVDLQSNATERLTNTLFINIS- 306
           ++ ++ S+      ++ +G+   ++   +        Y V    +   +L      +I  
Sbjct: 79  QLSHWGSIDTRVCGWTPDGEILAVASHGEPFSYFTWAYKVSPDGDPGRKLPWGPVADIQV 138

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE---ASYFDPVWSP--QGDLI 361
           A    +   ++       +   +  +  G    R+    E   A     + SP   G  I
Sbjct: 139 ADIGTERRSLLLTGTPPHEPASWK-RYRGGATGRLWLHGERLLAGLGGHLHSPMFVGGRI 197

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           AF         +     DGS  R   +     A   +  G  +++           L+ +
Sbjct: 198 AFLSDHEGVGNLYSCAYDGSDLRRHTDHEAFYARHAASDGTRVVY------QCAGDLWLV 251

Query: 422 D 422
           D
Sbjct: 252 D 252



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 63/186 (33%), Gaps = 16/186 (8%)

Query: 271 RALISVQKDE--AMDIYSVDLQSN--ATERLTNTL-FINISASYSPDSSQIVFESDREGK 325
           R       +   A++I S+   S      RL +            P+  ++   S     
Sbjct: 337 RVAYVTDAEGEDAIEIASLPRASGDRGPRRLASGELGRVRELVSDPEGERLAVASHDGRL 396

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGS 381
             + V + +      + +       D  +SP G  + ++      +  +  +  +     
Sbjct: 397 LLVDVTEESEGGVDELIRSVNGPVRDLAFSPDGQWLTWSHPGIGRTLRQIKMARLGTAAG 456

Query: 382 QERLLVEDSN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTP 434
            +R +V+ +N     + P ++  GR L F   +  D    +++ DL+   G    L+   
Sbjct: 457 GDRFIVDVTNGRFEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLS 516

Query: 435 AYASDP 440
           +    P
Sbjct: 517 SATPSP 522



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 56/164 (34%), Gaps = 8/164 (4%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
             E    + R+ +V+++     I+ +           R L       + E    P  +++
Sbjct: 328 MPEMLGASGRVAYVTDAEGEDAIEIASLPRASGDRGPRRLASGELGRVRELVSDPEGERL 387

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM---- 282
           A A++D   +L V + +       + I +    +    FS +G+    S           
Sbjct: 388 AVASHD-GRLLLVDVTEESEGGVDELIRSVNGPVRDLAFSPDGQWLTWSHPGIGRTLRQI 446

Query: 283 DIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDRE 323
            +  +   +     +   TN  F + +  ++ D   + F S R 
Sbjct: 447 KMARLGTAAGGDRFIVDVTNGRFEDENPVFTRDGRYLAFLSWRG 490



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 93/270 (34%), Gaps = 38/270 (14%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + ++  DG   R L+           ++P+ + +A A++ +      +      D  P 
Sbjct: 66  EVHLLPVDGGPARQLSHWGSIDTRVCGWTPDGEILAVASHGEPFSYFTWAYKVSPDGDPG 125

Query: 252 RIGNFRSMILAPRFSSNG---KRALISVQKDEAMDIYSVDLQSNATE------RLTNTLF 302
           R       +   + +  G   +  L++         +                RL   L 
Sbjct: 126 RKL-PWGPVADIQVADIGTERRSLLLTGTPPHEPASWKRYRGGATGRLWLHGERLLAGLG 184

Query: 303 INI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            ++ S  +     +I F SD EG   LY    +GSD +R   D EA Y     S  G  +
Sbjct: 185 GHLHSPMFV--GGRIAFLSDHEGVGNLYSCAYDGSDLRR-HTDHEAFYARHAAS-DGTRV 240

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR---SLIFSRKKDGD----- 413
            + + +G+ + +  +  D    RL   D  +  P    +GR    +  ++  DG      
Sbjct: 241 VY-QCAGDLWLVDDLSPDSEPRRL---DVRMGGPR---AGRRPYQVAAAQHVDGISVDET 293

Query: 414 --------TGSKLYSIDLNGRNETLINTPA 435
                    GS  +    +G   TL +TP 
Sbjct: 294 GRASAVVVRGSLYWLTHRDGPARTLTDTPG 323



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 43/111 (38%), Gaps = 5/111 (4%)

Query: 326 EQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + L++   +   +  R++ D+  +     +SP G  +A+T +      + ++  DG   R
Sbjct: 20  DDLWLAPLDSPGRAWRLTVDRTRT-GPARFSPDGRHLAYTNWRSLVPEVHLLPVDGGPAR 78

Query: 385 LLVEDS--NLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETLIN 432
            L      + +   W+P G  L  +   +     +  Y +  +G     + 
Sbjct: 79  QLSHWGSIDTRVCGWTPDGEILAVASHGEPFSYFTWAYKVSPDGDPGRKLP 129



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 31/94 (32%), Gaps = 8/94 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-----TRIDRAPKRIGNFRSMI 260
           L  S +  + +  FSP+ Q + ++       LR   M         DR    + N R   
Sbjct: 412 LIRSVNGPVRDLAFSPDGQWLTWSHPGIGRTLRQIKMARLGTAAGGDRFIVDVTNGRFED 471

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             P F+ +G+       +         D+ +   
Sbjct: 472 ENPVFTRDGRYLAFLSWRGFDP---VYDVHTGDL 502


>gi|229165147|ref|ZP_04292941.1| Acylamino-acid-releasing enzyme [Bacillus cereus AH621]
 gi|228618314|gb|EEK75345.1| Acylamino-acid-releasing enzyme [Bacillus cereus AH621]
          Length = 655

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 109/309 (35%), Gaps = 54/309 (17%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D IY   + +  D    I ++S        KN + V   DG +   +T  ++ +    ++
Sbjct: 69  DSIYPLWSPDSRD----IAYLSPVGDGDNKKNQIFVKSIDGYSELQITDEKEGVSTF-KW 123

Query: 220 SPNQQKVAYATYDD-----EDILRVY--------------------LMDTRIDRAPKRIG 254
            P  +   Y          +    +Y                        + D+  + I 
Sbjct: 124 EPTGKGFYYVAQSKECEEIKKRKELYGDFQHAGKEHRNNCLYYIEIEKGIQSDKEEREIS 183

Query: 255 NFRSMILAPRF-------SSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +     F       S++G + +     S+      D+Y +D+++   +++     +
Sbjct: 184 GVYQLTDGKDFYIHNFDISNDGTKVVFMATPSLNDYMNGDLYILDIEARELQKMNIDKLL 243

Query: 304 NISASYSPDSSQIVFE-SDREG--------KEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             S  +SP+ S+I +  S RE            L +   N     R   D +++     W
Sbjct: 244 GGSVCFSPEGSKICYSASIREKEYYKTHIQDSTLEIYDMNNGKLIRPLLDFDSTVMPLQW 303

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD 413
           + +G  I         + IG++ +DG+ E L  + D  +   + +  G  + +S+    +
Sbjct: 304 TDKG--ILIRWQDKTNYRIGLLCEDGTVEMLGDKVDGFIMDASITRDGNHISYSKAITNE 361

Query: 414 TGSKLYSID 422
           T  ++Y  D
Sbjct: 362 T-FEIYLDD 369



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 43/116 (37%), Gaps = 12/116 (10%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            A+ S D   + F        D   +  +++ + +      ++   +     P+WSP   
Sbjct: 22  GANISDDGKGVAFVKKTANWKDNTYRNHIWIYEKDKEQSYLLTT-GDIDSIYPLWSPDSR 80

Query: 360 LIAFTKFSGEKFA----IGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G+       I V   DG S+ ++  E   +    W P+G+   +  + 
Sbjct: 81  DIAYLSPVGDGDNKKNQIFVKSIDGYSELQITDEKEGVSTFKWEPTGKGFYYVAQS 136



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 9/94 (9%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPS 400
           +      S  G  +AF K +        +  I + +KD  Q  LL   D +   P WSP 
Sbjct: 19  TLSGANISDDGKGVAFVKKTANWKDNTYRNHIWIYEKDKEQSYLLTTGDIDSIYPLWSPD 78

Query: 401 GRSLIFSR--KKDGDTGSKLYSIDLNGRNETLIN 432
            R + +        +  ++++   ++G +E  I 
Sbjct: 79  SRDIAYLSPVGDGDNKKNQIFVKSIDGYSELQIT 112



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 63/219 (28%), Gaps = 48/219 (21%)

Query: 261 LAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                S +GK                   I+  +     +  LT     +I   +SPDS 
Sbjct: 21  SGANISDDGKGVAFVKKTANWKDNTYRNHIWIYEKDKEQSYLLTTGDIDSIYPLWSPDSR 80

Query: 315 QIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------ 364
            I + S        K Q++V   +G  + +I+ +KE       W P G    +       
Sbjct: 81  DIAYLSPVGDGDNKKNQIFVKSIDGYSELQITDEKEG-VSTFKWEPTGKGFYYVAQSKEC 139

Query: 365 -------------------KFSGEKFAIGVMK--------KDGSQERLLVEDSNL--QAP 395
                                +   + I + K        ++ S    L +  +      
Sbjct: 140 EEIKKRKELYGDFQHAGKEHRNNCLYYIEIEKGIQSDKEEREISGVYQLTDGKDFYIHNF 199

Query: 396 TWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNETLIN 432
             S  G  ++F      +      LY +D+  R    +N
Sbjct: 200 DISNDGTKVVFMATPSLNDYMNGDLYILDIEARELQKMN 238



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 93/272 (34%), Gaps = 56/272 (20%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDD 233
           + FV ++        +N + + ++D     YL  + D     P +SP+ + +AY +   D
Sbjct: 32  VAFVKKTANWKDNTYRNHIWIYEKD-KEQSYLLTTGDIDSIYPLWSPDSRDIAYLSPVGD 90

Query: 234 EDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQ--------------- 277
            D  +  +    ID   + +I + +  +   ++   GK      Q               
Sbjct: 91  GDNKKNQIFVKSIDGYSELQITDEKEGVSTFKWEPTGKGFYYVAQSKECEEIKKRKELYG 150

Query: 278 -------KDEAMDIYSVDLQSN-----------ATERLTNTLFINISAS-YSPDSSQIVF 318
                  +     +Y ++++                +LT+     I     S D +++VF
Sbjct: 151 DFQHAGKEHRNNCLYYIEIEKGIQSDKEEREISGVYQLTDGKDFYIHNFDISNDGTKVVF 210

Query: 319 ESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------- 363
            +     +     LY++     + ++++ DK        +SP+G  I +           
Sbjct: 211 MATPSLNDYMNGDLYILDIEARELQKMNIDKLLG-GSVCFSPEGSKICYSASIREKEYYK 269

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           T        I  M  +G   R L++  +   P
Sbjct: 270 THIQDSTLEIYDMN-NGKLIRPLLDFDSTVMP 300


>gi|145535406|ref|XP_001453437.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124421157|emb|CAK86040.1| unnamed protein product [Paramecium tetraurelia]
          Length = 513

 Score = 66.6 bits (161), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 50/321 (15%), Positives = 103/321 (32%), Gaps = 58/321 (18%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G ++  G D   +  R+WD    +QI+  +F                 +       +GD 
Sbjct: 163 GTILVSGSDDKSI--RIWDFNTGQQIL--QFDGHTRG-----------VLSVCFSPEGDI 207

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                       SG    S+ + D      ++        ++   FSP+   +A  + D+
Sbjct: 208 L----------ASGSRDMSIRLWDFKAKKQQFKLDGHTNSVWSVCFSPDGTFLASGSVDN 257

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQ 290
                + L + +     +++              +G    + VQ+ +   I      +++
Sbjct: 258 ----SIRLWNVKTGFEKQKL--------------DGHTDSMVVQQHQVAKIILQKKWNVK 299

Query: 291 SNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +     +L+       S  YSPD + +V  S     + + +        K        S 
Sbjct: 300 TGQLKTKLSGHTNCVNSVCYSPDGTSLVSGSV---DKSIRLWNVKTGQLKSKLNVHSDSV 356

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNL-QAPTWSPSGRSLIFS 407
               +SP G  +A          I +        +  L   SN   +  +SP G ++ F 
Sbjct: 357 NSVCFSPDGTSLASGSADNS---ILLWNFKTGHLKSKLYGSSNCINSVCFSPMGTTIAFC 413

Query: 408 RKKDGDTGSKLYSIDLNGRNE 428
              + DT    + I++    +
Sbjct: 414 ---NDDTSINFWDINMESEIK 431



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 68/246 (27%), Gaps = 44/246 (17%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           C+ D      +        I+    FSPN   +   + D      + + D    +   + 
Sbjct: 134 CLYDIKTGQQQDKLYGHTSIINSICFSPNGTILVSGSDDK----SIRIWDFNTGQQILQF 189

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                 +L+  FS  G   L S  +D ++ ++    +     +L        S  +SPD 
Sbjct: 190 DGHTRGVLSVCFSPEGD-ILASGSRDMSIRLWDFKAK-KQQFKLDGHTNSVWSVCFSPDG 247

Query: 314 SQIVFESDREGKEQLY--------------------------------VMQSNGSDQKRI 341
           + +   S  +   +L+                                         K  
Sbjct: 248 TFLASGS-VDNSIRLWNVKTGFEKQKLDGHTDSMVVQQHQVAKIILQKKWNVKTGQLKTK 306

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSP 399
                       +SP G  +           I +      Q   +L V   ++ +  +SP
Sbjct: 307 LSGHTNCVNSVCYSPDGTSLVSGSVDKS---IRLWNVKTGQLKSKLNVHSDSVNSVCFSP 363

Query: 400 SGRSLI 405
            G SL 
Sbjct: 364 DGTSLA 369


>gi|262197439|ref|YP_003268648.1| peptidase S9B dipeptidylpeptidase IV domain protein [Haliangium
           ochraceum DSM 14365]
 gi|262080786|gb|ACY16755.1| peptidase S9B dipeptidylpeptidase IV domain protein [Haliangium
           ochraceum DSM 14365]
          Length = 812

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 78/316 (24%), Gaps = 77/316 (24%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-------DDEDILRVYLMDTR 245
           L V +  G   R L       L +P+ SP+  +VAY                R      R
Sbjct: 172 LWVQEGLGGQRRELVSGEHGPLLDPQLSPDGSQVAYVHDAELYVVPTAGGAPRQLTEGAR 231

Query: 246 IDRAPKRIGNFRSMILAPR-----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                  +  + +     R     +S +G     +   +  +  Y +  Q          
Sbjct: 232 GTGKLHGLAEYIAQEEMSRYHGYWWSPSGTHLAFTEIDETHIPRYRIVHQGKDAT----G 287

Query: 301 LFINISASYSPDSSQIVFE-----SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                   Y    +          S R GK     +  +G+ +   +   +       W 
Sbjct: 288 PGAQEDHGYPFAGTSNAAVRLGVISHRGGKPVWMDLDMDGAARDPATGQPDIYLARVHWM 347

Query: 356 PQGDLIA----------------------------------------------------- 362
           P G L+A                                                     
Sbjct: 348 PDGRLLAELQNRAQNRLELVAFDLASGARTVLLSERSDSWINLHDLFRPVASGAHAGGFL 407

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYS 420
           +         + +    G+  R L E + +          G  +     KDG T   LY+
Sbjct: 408 WGSERSGFMHLYLYDAGGAVVRALTEGAWMVTDLVGVDEEGGQVYVIATKDGATERHLYA 467

Query: 421 IDLN-GRNETLINTPA 435
           + L+ G    L + P 
Sbjct: 468 VPLSGGAPVRLTSEPG 483



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 34/102 (33%), Gaps = 23/102 (22%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              L+V +  G  ++ +   +     DP  SP G  +A+   +     + V+   G   R
Sbjct: 169 GGGLWVQEGLGGQRRELVSGEHGPLLDPQLSPDGSQVAYVHDA----ELYVVPTAGGAPR 224

Query: 385 LLVED-------------------SNLQAPTWSPSGRSLIFS 407
            L E                    S      WSPSG  L F+
Sbjct: 225 QLTEGARGTGKLHGLAEYIAQEEMSRYHGYWWSPSGTHLAFT 266


>gi|240170321|ref|ZP_04748980.1| hypothetical protein MkanA1_13493 [Mycobacterium kansasii ATCC
           12478]
          Length = 363

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 22/189 (11%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---SVQKDEAMDIYSVDLQS-----N 292
           L  +     P R          P  S +    +    +   D   +++ +DL        
Sbjct: 14  LYVSEPAGTPGRKLTDGPADAQPAPSPDLSHVVFVRKATAADYGGELWILDLSPQLAPVG 73

Query: 293 ATERLTNT----------LFINISASYSPDSSQIVFESDREGK---EQLYVMQSNGSDQK 339
              RL +             +  S  +SP   Q+ F  +  G        ++ +  +   
Sbjct: 74  PPRRLVDPAALAHGSGDVPAMVASPRWSPTGKQVAFVDNPTGGAVDGGYLLVAAADTGAL 133

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-MKKDGSQERLLVEDSNLQAPTWS 398
             +Q K  +     W+P G  IA+ +   +   + V +   G     +  D+N  + T+S
Sbjct: 134 APTQQKLFAESGFAWAPDGRHIAWVQARSDVRPVDVNVLAVGGASTPVATDTNASSVTYS 193

Query: 399 PSGRSLIFS 407
             G++++F+
Sbjct: 194 KDGQAILFA 202



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 63/205 (30%), Gaps = 25/205 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID---- 247
           SL V +  G   R LT        +P  SP+   V +            L    +     
Sbjct: 13  SLYVSEPAGTPGRKLTDG--PADAQPAPSPDLSHVVFVRKATAADYGGELWILDLSPQLA 70

Query: 248 --RAPKRI----------GNFRSMILAPRFSSNGKRALISVQKDEAM----DIYSVDLQS 291
               P+R+          G+  +M+ +PR+S  GK+                +      +
Sbjct: 71  PVGPPRRLVDPAALAHGSGDVPAMVASPRWSPTGKQVAFVDNPTGGAVDGGYLLVAAADT 130

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYF 350
            A       LF     +++PD   I +   R   +     + + G     ++ D  AS  
Sbjct: 131 GALAPTQQKLFAESGFAWAPDGRHIAWVQARSDVRPVDVNVLAVGGASTPVATDTNAS-- 188

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGV 375
              +S  G  I F          GV
Sbjct: 189 SVTYSKDGQAILFANGDASGLDAGV 213



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 69/197 (35%), Gaps = 44/197 (22%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---EGKEQLYVM 331
           ++   +   +Y  +       +LT+    +   + SPD S +VF       +   +L+++
Sbjct: 5   ALFYTKTGSLYVSEPAGTPGRKLTDGPA-DAQPAPSPDLSHVVFVRKATAADYGGELWIL 63

Query: 332 QSNG-----SDQKRI---------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             +         +R+         S D  A    P WSP G  +AF              
Sbjct: 64  DLSPQLAPVGPPRRLVDPAALAHGSGDVPAMVASPRWSPTGKQVAFVDNPTGG------A 117

Query: 378 KDGSQERLLVEDSNLQAPT-----------WSPSGRSLIFSRKKDGDTGSKLYSIDLN-- 424
            DG    +   D+   APT           W+P GR + + + +     S +  +D+N  
Sbjct: 118 VDGGYLLVAAADTGALAPTQQKLFAESGFAWAPDGRHIAWVQAR-----SDVRPVDVNVL 172

Query: 425 --GRNETLINTPAYASD 439
             G   T + T   AS 
Sbjct: 173 AVGGASTPVATDTNASS 189



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 17/90 (18%)

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLN------ 424
           ++ V +  G+  R L +      P  SP    ++F RK    D G +L+ +DL+      
Sbjct: 13  SLYVSEPAGTPGRKLTDGPADAQPAPSPDLSHVVFVRKATAADYGGELWILDLSPQLAPV 72

Query: 425 GRNETLI----------NTPAYASDPQWVG 444
           G    L+          + PA  + P+W  
Sbjct: 73  GPPRRLVDPAALAHGSGDVPAMVASPRWSP 102



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 88/315 (27%), Gaps = 62/315 (19%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           +AH   D      +        ++ FV       +    L V   D       T  +   
Sbjct: 84  LAHGSGDVPAMVASPRWSPTGKQVAFVDNPTGGAVDGGYLLVAAAD-TGALAPTQQKLFA 142

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                ++P+ + +A+      D+  V +    +  A   +    +   +  +S +G+  L
Sbjct: 143 ESGFAWAPDGRHIAWVQAR-SDVRPVDVNVLAVGGASTPVAT-DTNASSVTYSKDGQAIL 200

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +                       N     + A   P      F     G   +   ++
Sbjct: 201 FA-----------------------NGDASGLDAGVPP------FAVRTGGIYSVAAAET 231

Query: 334 NGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLL 386
            G          K  SY+  + +     +AFT     + A      I V+    S  R  
Sbjct: 232 GGKRPAPTPLFAKPGSYYGDITALGSGAVAFTTQPPGRGAADPSKTIQVLDAGSSLPRTT 291

Query: 387 VED-----------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           V D                 +  Q P W   G  + +     G+    L   DL+ R+ T
Sbjct: 292 VTDVAVMLTCQDSPRGGSVCNAAQEPVWGA-GDFVAYLDTSSGNW---LVVTDLDNRSPT 347

Query: 430 LINTPAYASDPQWVG 444
            ++T        W  
Sbjct: 348 RVDTGVDTF--AWSP 360


>gi|240278179|gb|EER41686.1| WD40 domain-containing protein [Ajellomyces capsulatus H143]
          Length = 568

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 74/211 (35%), Gaps = 20/211 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +Y+       +   +FSP+   +A  + D      + + DT   R         + I
Sbjct: 209 YREKYVLKGHQLGVSTVKFSPDGSMIASCSAD----ATIKIWDTASGRLIHTFEGHLAGI 264

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIV 317
               +S +G     S   D+++ ++   + +        L +  +I  S ++SP  + +V
Sbjct: 265 STISWSPDGAIIA-SGSDDKSIRLW--HVSTGKPHPNPFLGHHNYI-YSVAFSPKGNMLV 320

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S     E +Y+     +   R                 G LI      G    I +  
Sbjct: 321 SGSY---DEAVYLWDVRSARVMRSLPAHSDPVAGVDIVRDGTLIVSCASDG---LIRIWD 374

Query: 378 KDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
               Q  R LV + N  + A  +SP+G+ ++
Sbjct: 375 TGTGQCLRTLVHEDNPPVSAVKFSPNGKYVL 405



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 55/179 (30%), Gaps = 12/179 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR-AP 250
           ++ + D     + +        +    +SP+   +A  + D      + L      +  P
Sbjct: 242 TIKIWDTASGRLIHTFEGHLAGISTISWSPDGAIIASGSDDK----SIRLWHVSTGKPHP 297

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                  + I +  FS  G   + S   DEA+ ++ V   +     L             
Sbjct: 298 NPFLGHHNYIYSVAFSPKGNMLV-SGSYDEAVYLWDV-RSARVMRSLPAHSDPVAGVDIV 355

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLI-AFTKFS 367
            D + IV  +       + +  +      R +  +         +SP G  + A+T   
Sbjct: 356 RDGTLIVSCAS---DGLIRIWDTGTGQCLRTLVHEDNPPVSAVKFSPNGKYVLAWTHDD 411



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 54/167 (32%), Gaps = 29/167 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G +I  G D   +  RLW V   K          P     + H   + IY      KG  
Sbjct: 273 GAIIASGSDDKSI--RLWHVSTGK----------PHPNPFLGHH--NYIYSVAFSPKG-- 316

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     +VSG    ++ + D   A +    P+    +       +   +     D 
Sbjct: 317 --------NMLVSGSYDEAVYLWDVRSARVMRSLPAHSDPVAGVDIVRDGTLIVSCASDG 368

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKD 279
                + + DT   +  + + +  +  + A +FS NGK  L     D
Sbjct: 369 ----LIRIWDTGTGQCLRTLVHEDNPPVSAVKFSPNGKYVLAWTHDD 411


>gi|168698973|ref|ZP_02731250.1| probable peptidase [Gemmata obscuriglobus UQM 2246]
          Length = 750

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 58/199 (29%), Gaps = 73/199 (36%)

Query: 263 PRFSSNGKRALISVQKD---EAMDIYSVDLQSNATE------------------------ 295
           P+ + +GK  L  ++ D    A+ ++  D+ +  T+                        
Sbjct: 51  PKVAPDGKTVLF-LRADADKPALKLFEFDVATGQTKELLSPQALLGSGDENLTPEEKARR 109

Query: 296 ---RLTNTLFINISASYSPDSSQIVFESDREGKE-------QLYVMQSNGSDQKRISQDK 345
              RLT   F +             F  D  G         +L+V          +    
Sbjct: 110 ERMRLTAGGFAD-------------FHFDAAGNNILLPLSGRLFVYDRATRKVTELKTGA 156

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------------ 393
             +  DP WSP G  +A+ +     F + V+    + E  +     +Q            
Sbjct: 157 GGAVVDPKWSPDGKKVAYVR----GFDVYVIDLATNTETAITTGGTVQKTHGLAEFVAQE 212

Query: 394 ------APTWSPSGRSLIF 406
                    WSP  + + +
Sbjct: 213 EMGRFTGYWWSPDSKYIAY 231



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 57/163 (34%), Gaps = 38/163 (23%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+++ D    +  +        ++ P++S +GK+           D+Y +DL +N    +
Sbjct: 138 RLFVYDRATRKVTELKTGAGGAVVDPKWSPDGKKVAYV----RGFDVYVIDLATNTETAI 193

Query: 298 TNT-----------------LFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQK 339
           T                   +       +SPDS  I + E+D  G E  +V      + K
Sbjct: 194 TTGGTVQKTHGLAEFVAQEEMGRFTGYWWSPDSKYIAYEEADHAGVETWFVADPFKPNAK 253

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            + Q      F P   P    +A          +GV+   G +
Sbjct: 254 PLEQ------FYPR--PGKKNVAV--------RLGVVPVAGGE 280



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 29/236 (12%), Positives = 65/236 (27%), Gaps = 37/236 (15%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           + +    G F       + + +   +   L V DR    +  L       + +P++SP+ 
Sbjct: 110 ERMRLTAGGFADFHFDAAGNNILLPLSGRLFVYDRATRKVTELKTGAGGAVVDPKWSPDG 169

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-----RSMILAPR-----------FSS 267
           +KVAY          VY++D   +                +                +S 
Sbjct: 170 KKVAYV-----RGFDVYVIDLATNTETAITTGGTVQKTHGLAEFVAQEEMGRFTGYWWSP 224

Query: 268 NGKRALISVQKDEAMDIY-SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           + K           ++ +   D      + L           Y     + V         
Sbjct: 225 DSKYIAYEEADHAGVETWFVADPFKPNAKPL--------EQFYPRPGKKNVAV------- 269

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +L V+   G +   +   +        W   G +      + +++ +     D  +
Sbjct: 270 RLGVVPVAGGETVWMEMHRYEYLARVDWGKAGLVYQLQSRNQKEWGLQRYDPDTGK 325


>gi|254430081|ref|ZP_05043788.1| hypothetical protein ADG881_3311 [Alcanivorax sp. DG881]
 gi|196196250|gb|EDX91209.1| hypothetical protein ADG881_3311 [Alcanivorax sp. DG881]
          Length = 877

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 80/215 (37%), Gaps = 57/215 (26%)

Query: 264 RFSSNGKRALISVQKDEAMD----------IYSVDLQSNATERLTNT-----LFINISAS 308
             S +G R L + +  E  D          ++  D Q     RL ++        +   +
Sbjct: 103 SVSPDGTRLLFAARAPEIPDADEDEQPTWNVWEYDFQGGGIHRLISSDLLAEEGQDRYPA 162

Query: 309 YSPDSSQIVFESDR----------EGKEQLY--------------VMQSNGSDQKRISQD 344
           Y PD  +IVF S R          EGK Q Y              VMQ +GSD ++I+ +
Sbjct: 163 YLPDG-RIVFSSTRQRQARARLLDEGKPQFYPLEEGRDVSAFALHVMQPDGSDIQQITFN 221

Query: 345 KEASYFDPVWSPQGDLIAFTKFSG----EKFAIGVMKKDGSQER--------LLVEDSNL 392
                  P+    G  + F ++      ++F +  +  DG+            L +D+  
Sbjct: 222 MSHDV-APLVKADGR-VVFLRWDNKDNEDRFDLYRVNPDGTALTPLYGAESHALTDDTRR 279

Query: 393 QAP--TWSPSGRSLIFSRKKDGDTGS-KLYSIDLN 424
           +    ++   GR L   R ++   G  +  +ID++
Sbjct: 280 EFMPLSFMGDGRLLTAIRLRETAAGQMEPVAIDID 314



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 29/91 (31%), Gaps = 17/91 (18%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGE----------KFAIGVMKKDGSQER------LLV 387
                  D   SP G  + F   + E           + +      G          LL 
Sbjct: 94  GAGHDIRDLSVSPDGTRLLFAARAPEIPDADEDEQPTWNVWEYDFQGGGIHRLISSDLLA 153

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           E+   + P + P GR ++FS  +     ++L
Sbjct: 154 EEGQDRYPAYLPDGR-IVFSSTRQRQARARL 183


>gi|84622028|ref|YP_449400.1| hypothetical protein XOO_0371 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84365968|dbj|BAE67126.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 293

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 68/214 (31%), Gaps = 25/214 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATER----LTNTLFINI 305
           + +  +       S +G+R + +  +       D++   L+    +       NT     
Sbjct: 33  VVSTPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQNALPLPINTAQDET 92

Query: 306 SASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSP 356
           + ++S D   ++F S R    G   LY    +        Q      +   +   P  S 
Sbjct: 93  TPTFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSL 152

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLIFS 407
            G  + F            + V   DG      V   ++ +        W   GR+L+++
Sbjct: 153 DGMRLLFASDGHGGAGGMDLFVAHWDGKAFSQPVALVDINSAADELDAAWLGDGRALVWT 212

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R K       L +   +G     +  P   + PQ
Sbjct: 213 RGKTDGPSQLLLATCKDGHFAQGLPLPLSFNGPQ 246



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 58/170 (34%), Gaps = 24/170 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGS---DQKRISQDKEASYFDP 352
           +T      A+ SPD  +IV+ SDR    G   L+  Q  G    +   +  +       P
Sbjct: 35  STPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQNALPLPINTAQDETTP 94

Query: 353 VWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQE--------RLLVEDSNLQAPTWSPSG 401
            +S  G  + F            +     D              +    N +APT S  G
Sbjct: 95  TFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSLDG 154

Query: 402 RSLIFSRK-KDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
             L+F+     G  G  L+    +G+  +       IN+ A   D  W+G
Sbjct: 155 MRLLFASDGHGGAGGMDLFVAHWDGKAFSQPVALVDINSAADELDAAWLG 204



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 22/168 (13%)

Query: 220 SPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ Q++ +A+         D+ +  L   R   A     N       P FS++G+  L 
Sbjct: 46  SPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQNALPLPINTAQDETTPTFSADGRWLLF 105

Query: 275 SVQKDEAM---DIYSVDLQS----NATERL---TNTLFINISASYSPDSSQIVFESD--- 321
           +  +       D+Y   + +     A + +    N+     + + S D  +++F SD   
Sbjct: 106 ASTRPGGAGGSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSLDGMRLLFASDGHG 165

Query: 322 REGKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQGDLIAFTK 365
             G   L+V   +G    +    +  +  A   D  W   G  + +T+
Sbjct: 166 GAGGMDLFVAHWDGKAFSQPVALVDINSAADELDAAWLGDGRALVWTR 213



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 51/165 (30%), Gaps = 19/165 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTP---SRDQILFEPRFSPNQQKVAYATYDDE--- 234
           +     G     L      G   +   P   +  Q    P FS + + + +A+       
Sbjct: 55  ASDRAGGAGGWDLWQAQLRGGRWQNALPLPINTAQDETTPTFSADGRWLLFASTRPGGAG 114

Query: 235 --DILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEAM---DIYS 286
             D+ R  +    +  A + +G   N      AP  S +G R L +          D++ 
Sbjct: 115 GSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSLDGMRLLFASDGHGGAGGMDLFV 174

Query: 287 VDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREGKE 326
                 A  +       N+    + A++  D   +V+   +    
Sbjct: 175 AHWDGKAFSQPVALVDINSAADELDAAWLGDGRALVWTRGKTDGP 219


>gi|297201281|ref|ZP_06918678.1| WD-40 repeat protein [Streptomyces sviceus ATCC 29083]
 gi|297147841|gb|EFH28754.1| WD-40 repeat protein [Streptomyces sviceus ATCC 29083]
          Length = 964

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 93/284 (32%), Gaps = 28/284 (9%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++RI  V+  +       +  ++    A +          ++   FSP+ + +A A YD 
Sbjct: 279 SARIDLVAHRLRPDDEGTNTRLISIVNAPLATPLTGHTGAVYLTSFSPDGKLLATAGYDR 338

Query: 234 EDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                V L D    R PK +G       S + +  FS +G+    +    +       D 
Sbjct: 339 ----TVRLWDVSDRRHPKALGKPLAGGTSWVSSAVFSPDGRTLAGAGDDGKIRRWDLADP 394

Query: 290 QSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDK 345
           +        L          ++SPD   +       G+++   + +    Q+  +     
Sbjct: 395 RHPKPLGTPLAGHGGTIYLIAFSPDGRTLA----SAGEDRTVRLWNTRGAQRPPTVLTGA 450

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-----RLLV-EDSNLQAPTWSP 399
            A+     WSP G  +A     G+  ++ +      +      R+L      + +  +SP
Sbjct: 451 GAAVRSVAWSPDGRTLA---AGGDDDSVRLWNTTDVRRPRAYDRVLKGHTGLVHSVAFSP 507

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            G  L        D   +L+ +        +       + P W 
Sbjct: 508 DGTELA---SGSADDSVRLWDVRDPADPRQVGPPLTGHTGPIWS 548



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 60/372 (16%), Positives = 120/372 (32%), Gaps = 62/372 (16%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ---VLVTG------RVIKEGKDRLRV- 126
               LI+     + + +       + WN+ GAQ    ++TG       V      R    
Sbjct: 409 GTIYLIAFSPDGRTLASAGEDRTVRLWNTRGAQRPPTVLTGAGAAVRSVAWSPDGRTLAA 468

Query: 127 -----EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                  RLW+  D ++   + +         + H+++           G          
Sbjct: 469 GGDDDSVRLWNTTDVRRP--RAYDRVLKGHTGLVHSVA-------FSPDG---------- 509

Query: 182 ESVVSGIIKNSLCVMD-RDGANIRYL---TPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
             + SG   +S+ + D RD A+ R +          ++   FSP+ + +A A+ D    L
Sbjct: 510 TELASGSADDSVRLWDVRDPADPRQVGPPLTGHTGPIWSVAFSPDGRMLAAASADSTASL 569

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                     +  + +      + A  FS + +    +   D  + ++S+          
Sbjct: 570 WNVSDPAYPSQVGEPLTGSSGEMYALGFSPDSRTLA-TGSGDSKVRLWSIPA-------- 620

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ---KRISQDKEASYFDPVW 354
                +  S ++  D   +   + R+G+ +L+ +          K  +          ++
Sbjct: 621 --GDLVGGSGAFRRDGQVLA-TAGRDGRIRLWNVTDPARPLALGKPFTPVVRDPDSQVLF 677

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAP---TWSPSGRSLIFSRK 409
           SP G  +A    SG      V            LV  S    P    +SP GR+L  +  
Sbjct: 678 SPDGRTLA-VLTSGRVHLWNVADPAHPVPYGPALVLRSRFMGPDALAFSPDGRTLATAYD 736

Query: 410 KDGDTGSKLYSI 421
                  +L+ +
Sbjct: 737 SH---TLQLWDV 745



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 69/219 (31%), Gaps = 22/219 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A   YD   +    + D     +   I   R  I    FS +G+    S  
Sbjct: 723 AFSPDGRTLA-TAYDSHTLQLWDVTDPSRPVSHGPIAGHRGYINGLTFSPDGRTLA-SGS 780

Query: 278 KDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D  + ++ V   +  T   + LT          +SPD   +    D +      V    
Sbjct: 781 ADGTIRLWKVTDPARPTLLGKPLTGHTGPVNVLLFSPDGHTLASGGDDDTVRLWDVADPA 840

Query: 335 GSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            ++Q   +      +     +S  G  +A            V     +            
Sbjct: 841 HAEQAGAALTGHTEAVVSLTYSRDGARLASGGNDNTVRLWDVADPSAAAPI-----GQSM 895

Query: 394 APT--------WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +P+        +SP  R L  S    G    +L+ +D++
Sbjct: 896 SPSAKTGSFLTFSPDSRMLGISS---GADTIRLWDLDVD 931



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/331 (15%), Positives = 99/331 (29%), Gaps = 46/331 (13%)

Query: 123 RLRVEFRLWDVKD-------RKQIIGKKFFSSPA----SWRKIAHT----------ISDD 161
                 RLWDV D        K + G   + S A      R +A            ++D 
Sbjct: 335 GYDRTVRLWDVSDRRHPKALGKPLAGGTSWVSSAVFSPDGRTLAGAGDDGKIRRWDLADP 394

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGII------KNSLCVMDRDGA-NIRYLTPSRDQIL 214
            +    G     +   +++      G          ++ + +  GA     +       +
Sbjct: 395 RHPKPLGTPLAGHGGTIYLIAFSPDGRTLASAGEDRTVRLWNTRGAQRPPTVLTGAGAAV 454

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               +SP+ + +A    DD   L       R     + +     ++ +  FS +G     
Sbjct: 455 RSVAWSPDGRTLAAGGDDDSVRLWNTTDVRRPRAYDRVLKGHTGLVHSVAFSPDGTELA- 513

Query: 275 SVQKDEAMDIYSV--DLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           S   D+++ ++ V            LT       S ++SPD   +   S         V 
Sbjct: 514 SGSADDSVRLWDVRDPADPRQVGPPLTGHTGPIWSVAFSPDGRMLAAASADSTASLWNVS 573

Query: 332 QSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                S             +   +SP    +A T     K  +  +         LV  S
Sbjct: 574 DPAYPSQVGEPLTGSSGEMYALGFSPDSRTLA-TGSGDSKVRLWSIPAGD-----LVGGS 627

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 +   G+ L  +  +DG    +L+++
Sbjct: 628 G----AFRRDGQVLA-TAGRDGR--IRLWNV 651



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 50/158 (31%), Gaps = 12/158 (7%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ---DKEASYF 350
              LT         S+SPD   +   +  +   +L+ +  +    K + +      +   
Sbjct: 309 ATPLTGHTGAVYLTSFSPDGKLLA-TAGYDRTVRLWDVS-DRRHPKALGKPLAGGTSWVS 366

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQAPTWSPSGRSLIFS 407
             V+SP G  +A     G+     +      +     L      +    +SP GR+L   
Sbjct: 367 SAVFSPDGRTLAGAGDDGKIRRWDLADPRHPKPLGTPLAGHGGTIYLIAFSPDGRTLA-- 424

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQWVG 444
                D   +L++     R  T++     A     W  
Sbjct: 425 -SAGEDRTVRLWNTRGAQRPPTVLTGAGAAVRSVAWSP 461


>gi|269836128|ref|YP_003318356.1| hypothetical protein Sthe_0095 [Sphaerobacter thermophilus DSM
           20745]
 gi|269785391|gb|ACZ37534.1| hypothetical protein Sthe_0095 [Sphaerobacter thermophilus DSM
           20745]
          Length = 763

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 77/249 (30%), Gaps = 27/249 (10%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V    G   R +      +       P  ++VA       D   VYL         K 
Sbjct: 461 LWVQPASGDAPRVVAQGNADLDAF-WLVPGGKQVA---VRFADDPAVYLAPLDGGALRKA 516

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SAS 308
                  +     S +G R        +   ++  +       ++              S
Sbjct: 517 TMPDGRAVTEYVVSPDGTRIAYV--PVDRQSLWVSNTDGRNLTQVHAVEIPEAQTIHGVS 574

Query: 309 YSPDSSQIVF-ESDREGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLIAFTK 365
           ++P    + +  S      + +V    G ++  + +            WSP G  +A++ 
Sbjct: 575 WAPRGYTLRYEVSQIAAGFRPFVATVGGPNETIEPVKHQLPREVLSYAWSPGGTELAYST 634

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGD--TGS 416
           ++G    I  ++     E  +   +  + P        W P GR L F   +D    T +
Sbjct: 635 YNG----IFRLRLSDGAETAITPAALREGPQRAIDALHWLPDGR-LAFVVHEDSTVYTPA 689

Query: 417 KLYSIDLNG 425
            L+ ++ +G
Sbjct: 690 DLWLMNADG 698



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 70/224 (31%), Gaps = 21/224 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + +   DG  +R  T    + + E   SP+  ++AY   D + +         + +    
Sbjct: 503 VYLAPLDGGALRKATMPDGRAVTEYVVSPDGTRIAYVPVDRQSLWVSNTDGRNLTQVHAV 562

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---- 308
                  I    ++  G      V +  A     V       E  T     +        
Sbjct: 563 EIPEAQTIHGVSWAPRGYTLRYEVSQIAAGFRPFVATVGGPNE--TIEPVKHQLPREVLS 620

Query: 309 --YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-----DKEASYFDPVWSPQGDLI 361
             +SP  +++ + +       ++ ++ +   +  I+        + +     W P G L 
Sbjct: 621 YAWSPGGTELAYST----YNGIFRLRLSDGAETAITPAALREGPQRAIDALHWLPDGRLA 676

Query: 362 AFTKFSGEKF---AIGVMKKDGSQE-RLLVEDSNLQAPTWSPSG 401
                    +    + +M  DGS   R ++    +    W+P G
Sbjct: 677 FVVHEDSTVYTPADLWLMNADGSDAWRAVIGVGPVDVLRWTPDG 720



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 63/181 (34%), Gaps = 20/181 (11%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIV--FESDREGKEQLYVMQ 332
           V  D  + ++      +A   +      ++ A +  P   Q+   F  D      +Y+  
Sbjct: 453 VTPDGVLGLWVQPASGDAPRVVAQGNA-DLDAFWLVPGGKQVAVRFADD----PAVYLAP 507

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-----LV 387
            +G   ++ +     +  + V SP G  IA+      + ++ V   DG          + 
Sbjct: 508 LDGGALRKATMPDGRAVTEYVVSPDGTRIAYVPVD--RQSLWVSNTDGRNLTQVHAVEIP 565

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN----TPAYASDPQWV 443
           E   +   +W+P G +L +   +    G + +   + G NET+       P       W 
Sbjct: 566 EAQTIHGVSWAPRGYTLRYEVSQIA-AGFRPFVATVGGPNETIEPVKHQLPREVLSYAWS 624

Query: 444 G 444
            
Sbjct: 625 P 625



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 61/185 (32%), Gaps = 7/185 (3%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           +  +  + S    R +    + +I ++ T     +  R   +   V          V   
Sbjct: 541 VDRQSLWVSNTDGRNLTQVHAVEIPEAQTIHGVSWAPRGYTLRYEVSQIAAGFRPFVATV 600

Query: 199 DGAN--IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
            G N  I  +     + +    +SP   ++AY+TY+    LR+                 
Sbjct: 601 GGPNETIEPVKHQLPREVLSYAWSPGGTELAYSTYNGIFRLRLSDGAETAITPAALREGP 660

Query: 257 RSMILAPRFSSNGKRALISVQKDEA----MDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +  I A  +  +G R    V +D       D++ ++   +   R    +       ++PD
Sbjct: 661 QRAIDALHWLPDG-RLAFVVHEDSTVYTPADLWLMNADGSDAWRAVIGVGPVDVLRWTPD 719

Query: 313 SSQIV 317
            +  V
Sbjct: 720 GAGFV 724


>gi|86742078|ref|YP_482478.1| WD-40 repeat-containing serine/threonin protein kinase [Frankia sp.
           CcI3]
 gi|86568940|gb|ABD12749.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           CcI3]
          Length = 729

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 77/250 (30%), Gaps = 15/250 (6%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
             D  N   L        +   F+P    +A  +     +L + + D R           
Sbjct: 477 HPDQVNTLTLHTGGTP--YGAAFNPAGTLLA-ISTSTGAVLLIDITDPRATSTLATFTPH 533

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQ 315
             +     FS +G     +   D    ++ V         L T        A++SPD + 
Sbjct: 534 SYIAGNVAFSPDGHTLA-TASLDGTARLWDV-TDPRTPRPLATLAPGPTFDATFSPDGTM 591

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +   + ++G   L+ + +    Q   +  +       V++P G  +A     G      +
Sbjct: 592 LA-TAQQDGTTLLWTLTTPTQPQPAATIPETGMTTTAVFAPDGTTLATASTDGTAHLWDL 650

Query: 376 MKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                 +    L      ++   +   G  L        DT ++L+ ++          T
Sbjct: 651 TNPRTPRPLATLTGHTGPVETLAF--DGTMLA---TAGDDTTARLWDLNPTSLTRRACTT 705

Query: 434 P-AYASDPQW 442
           P    S+ +W
Sbjct: 706 PTGRLSEDEW 715



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 76/260 (29%), Gaps = 9/260 (3%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H  +  +    T +  D   R+   +  +          +           T      + 
Sbjct: 346 HGAAAILADQATTDDPDLAVRLAVAAYRLNPDPAARIALLAAAARGLPPLATFRHSGKIL 405

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               SP+   +A  + D    L      T  D+    +G+   +     F+  G     +
Sbjct: 406 SVAISPDGHTLATGSADHTARL---WNPTHPDQPVATLGHDDGVN-HVAFNPAGTLLA-T 460

Query: 276 VQKDEAMDIYSV--DLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
              D  + ++++      +    LT +T      A+++P  + +   +       + +  
Sbjct: 461 TSDDTTIRLWNITDPHHPDQVNTLTLHTGGTPYGAAFNPAGTLLAISTSTGAVLLIDITD 520

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
              +              +  +SP G  +A     G      V      +    +     
Sbjct: 521 PRATSTLATFTPHSYIAGNVAFSPDGHTLATASLDGTARLWDVTDPRTPRPLATLAPGPT 580

Query: 393 QAPTWSPSGRSLIFSRKKDG 412
              T+SP G  L  + ++DG
Sbjct: 581 FDATFSPDGTMLA-TAQQDG 599


>gi|21244752|ref|NP_644334.1| hypothetical protein XAC4035 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21110446|gb|AAM38870.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 293

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 68/214 (31%), Gaps = 25/214 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAM---DIYSVDLQSNATE----RLTNTLFINI 305
           + +  +       S +G+R + +  +       D++   L+    +       NT     
Sbjct: 33  VVSTPANEARATLSPDGQRIVWASDRTGGTGGWDLWQAQLRGGRWQDAQPLPINTAQDET 92

Query: 306 SASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSP 356
           +  +S D   ++F S R    G   LY    +        Q      D   +   P  S 
Sbjct: 93  TPLFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGAVGPVQSLGAAIDSAGNERAPTLSL 152

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLIFS 407
            G  + F            + V   DG      V   ++ +        W   GR+L+++
Sbjct: 153 DGTRLLFASDGHGGAGGMDLFVAHWDGQAFTAPVALVDINSAADELDAAWLGDGRALVWA 212

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R K  D    L +I  +G        P   + PQ
Sbjct: 213 RGKTDDPSQLLLAICKDGHFVQGSPLPLSFNGPQ 246



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 61/170 (35%), Gaps = 24/170 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQ---LYVMQSNGS---DQKRISQDKEASYFDP 352
           +T      A+ SPD  +IV+ SDR G      L+  Q  G    D + +  +       P
Sbjct: 35  STPANEARATLSPDGQRIVWASDRTGGTGGWDLWQAQLRGGRWQDAQPLPINTAQDETTP 94

Query: 353 VWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLVED--------SNLQAPTWSPSG 401
           ++S  G  + F            +     D       V+          N +APT S  G
Sbjct: 95  LFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGAVGPVQSLGAAIDSAGNERAPTLSLDG 154

Query: 402 RSLIFSRK-KDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
             L+F+     G  G  L+    +G+  T       IN+ A   D  W+G
Sbjct: 155 TRLLFASDGHGGAGGMDLFVAHWDGQAFTAPVALVDINSAADELDAAWLG 204



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 62/168 (36%), Gaps = 22/168 (13%)

Query: 220 SPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ Q++ +A+         D+ +  L   R   A     N       P FS++G+  L 
Sbjct: 46  SPDGQRIVWASDRTGGTGGWDLWQAQLRGGRWQDAQPLPINTAQDETTPLFSADGRWLLF 105

Query: 275 SVQKDEAM---DIYSVDLQS----NATERL---TNTLFINISASYSPDSSQIVFESD--- 321
           +  +       D+Y   + +       + L    ++     + + S D ++++F SD   
Sbjct: 106 ASTRPGGAGGSDLYRAPVDAQGAVGPVQSLGAAIDSAGNERAPTLSLDGTRLLFASDGHG 165

Query: 322 REGKEQLYVMQSNG----SDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             G   L+V   +G    +    +  +  A   D  W   G  + + +
Sbjct: 166 GAGGMDLFVAHWDGQAFTAPVALVDINSAADELDAAWLGDGRALVWAR 213



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 53/164 (32%), Gaps = 20/164 (12%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            RI++ S+    G     L      G    + + L  +  Q    P FS + + + +A+ 
Sbjct: 50  QRIVWASDRT-GGTGGWDLWQAQLRGGRWQDAQPLPINTAQDETTPLFSADGRWLLFAST 108

Query: 232 DDE-----DILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEAM- 282
                   D+ R  +         + +G   +      AP  S +G R L +        
Sbjct: 109 RPGGAGGSDLYRAPVDAQGAVGPVQSLGAAIDSAGNERAPTLSLDGTRLLFASDGHGGAG 168

Query: 283 --DIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFE 319
             D++       A          N+    + A++  D   +V+ 
Sbjct: 169 GMDLFVAHWDGQAFTAPVALVDINSAADELDAAWLGDGRALVWA 212


>gi|114562415|ref|YP_749928.1| hypothetical protein Sfri_1237 [Shewanella frigidimarina NCIMB 400]
 gi|114333708|gb|ABI71090.1| conserved hypothetical protein [Shewanella frigidimarina NCIMB 400]
          Length = 885

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 73/186 (39%), Gaps = 41/186 (22%)

Query: 264 RFSSNGKRALISVQK---DEAMD-------IYSVDLQSNATERL-----TNTLFINISAS 308
             S +G++ L++++    D   D       I+   + S   ER+     T     ++  +
Sbjct: 104 SVSDDGQQLLMAIRAPEIDGVDDDEQPKWNIWRYTVASQTLERIITSDITAEQGNDLMPA 163

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PD  +I+F S R+   +  ++      + + +   E                    + 
Sbjct: 164 FLPDG-RIIFASTRQRLSRAILLD---EGKPQYTALDE------------------SRAN 201

Query: 369 EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR--KKDGDTGSKLYSIDLNG 425
           E F I VM  DGS  + L    S+   P    SG+ +++SR  +  G  G  LY ++ +G
Sbjct: 202 ETFNIHVMDPDGSAIKQLTFNLSHDFYPLVLQSGK-ILYSRWDRMGGGHGINLYRMNPDG 260

Query: 426 RNETLI 431
               L+
Sbjct: 261 TENELV 266



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 46/143 (32%), Gaps = 30/143 (20%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNF----RSMILAPRFSSNGKRALISVQK------ 278
              D++    ++          + I +     +   L P F  +G+    S ++      
Sbjct: 124 VDDDEQPKWNIWRYTVASQTLERIITSDITAEQGNDLMPAFLPDGRIIFASTRQRLSRAI 183

Query: 279 -----------------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
                            +E  +I+ +D   +A ++LT  L  +           +    D
Sbjct: 184 LLDEGKPQYTALDESRANETFNIHVMDPDGSAIKQLTFNLSHDFYPLVLQSGKILYSRWD 243

Query: 322 REGKEQ---LYVMQSNGSDQKRI 341
           R G      LY M  +G++ + +
Sbjct: 244 RMGGGHGINLYRMNPDGTENELV 266


>gi|158318844|ref|YP_001511352.1| WD-40 repeat-containing protein [Frankia sp. EAN1pec]
 gi|158114249|gb|ABW16446.1| WD-40 repeat protein [Frankia sp. EAN1pec]
          Length = 1401

 Score = 66.6 bits (161), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 46/319 (14%), Positives = 99/319 (31%), Gaps = 47/319 (14%)

Query: 130  LWDVK---DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            +WDV    D +++       S   W             ++ G  G     ++     +V+
Sbjct: 1019 VWDVAFSPDGRRLASVSVDGSLRVWEMPG--------PALIGRNGAQEDAVVNPVTGIVA 1070

Query: 187  GIIKNSLCVMDRD-GANIRYLTPSRDQIL------FEPRFSPNQQKVAYATYDDEDILRV 239
                 ++ + D D     R L    D I+          FSP+   +A           +
Sbjct: 1071 ITTDKAVELWDVDDPYAPRRLHVLTDVIVDEYDPTGSSAFSPDGNVLA-----VGTGKNI 1125

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQS----- 291
               D R    P RI +            FS +G+   +          +   +++     
Sbjct: 1126 VFYDVRDPAKPSRISDVPGPAGGTAELLFSPDGRTLALGGLNSPPEPAFQARVETWDVTD 1185

Query: 292  -NATERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---SQD 344
             +   RL +           ++SPD   +V  ++R     + +       + R+     +
Sbjct: 1186 LSRPRRLASLIAHRSSVRDLTFSPDGRTLVSAAERS----VKLWDVTDPRRLRLVSELPE 1241

Query: 345  KEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                 ++  +SP G  +A    +     + +  M        L    +++ +  +SP G 
Sbjct: 1242 FPGGVWEVRFSPDGRTLAAGGANPFATLWDVTRMDAPRQIADLPGHSASVTSVAFSPDGT 1301

Query: 403  SLIFSRKKDGDTGSKLYSI 421
             L        D   +++ +
Sbjct: 1302 QLATGSN---DNTVRIWDV 1317



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 104/268 (38%), Gaps = 38/268 (14%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            +  +D D  ++ +L       +++  FSP+ +++A  + D      + + +        R
Sbjct: 1000 IFDVDVDQYSLTFLDEG--ATVWDVAFSPDGRRLASVSVDG----SLRVWEMPGPALIGR 1053

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL--QSNATERLTNTLFINISAS-- 308
             G     ++ P         ++++  D+A++++ VD          LT+ +      +  
Sbjct: 1054 NGAQEDAVVNPV------TGIVAITTDKAVELWDVDDPYAPRRLHVLTDVIVDEYDPTGS 1107

Query: 309  --YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFT 364
              +SPD + +       GK  ++    + +   RIS          + ++SP G  +A  
Sbjct: 1108 SAFSPDGNVLAVG---TGKNIVFYDVRDPAKPSRISDVPGPAGGTAELLFSPDGRTLALG 1164

Query: 365  KFSG----------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
              +           E + +  + +      L+   S+++  T+SP GR+L+ + ++    
Sbjct: 1165 GLNSPPEPAFQARVETWDVTDLSRPRRLASLIAHRSSVRDLTFSPDGRTLVSAAERS--- 1221

Query: 415  GSKLYSIDLNGRNETLINTPAYASDPQW 442
              KL+ +  + R   L++         W
Sbjct: 1222 -VKLWDV-TDPRRLRLVSELPEFPGGVW 1247



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 53/271 (19%), Positives = 89/271 (32%), Gaps = 44/271 (16%)

Query: 165  SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG----------ANIRYL--TPSRDQ 212
             I  E+G  + R +        G +   L     DG          A  R L   P  D 
Sbjct: 776  RIPDERGGGHGRAVKAVAFSRDGTV---LATGGADGLAKLWNITDRARPRLLATLPKADS 832

Query: 213  ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNG 269
             ++   F P   ++A   Y        Y+ D      P++ G      + ++A  FS +G
Sbjct: 833  EVYGLAFDPTSDRLAVGGYGK----SAYIYDVSDPARPEKKGQLFLHLAQVVALEFSPDG 888

Query: 270  KRALISVQKDEAMDIYSVDLQSNATERL----------TNTLFINISASYSPDSSQIVFE 319
                I+  +  +  ++SV    +    L          ++      S ++  D    V+ 
Sbjct: 889  AFL-IAGDEGGSALLWSVS-DPSNPRPLKVLVEDGGPSSDGAGAIRSITFGGDG-HTVYT 945

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-----PQGDLIAFTKFSGEKFAIG 374
            +   G    YV + +G D  R+  D  A   D   +     P   L+    F      I 
Sbjct: 946  AGDGG----YVRKFSGPDLPRLEYDGRAGTGDAPMTGLAVDPVSGLVGVGGFRYVGVPIF 1001

Query: 375  VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +  D      L E + +    +SP GR L 
Sbjct: 1002 DVDVDQYSLTFLDEGATVWDVAFSPDGRRLA 1032


>gi|227538271|ref|ZP_03968320.1| prolyl oligopeptidase family protein [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227241786|gb|EEI91801.1| prolyl oligopeptidase family protein [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 699

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 14/125 (11%)

Query: 264 RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSS 314
            +S + K  L   +K            DIY  DL    T  LT  +   + +  YSP+  
Sbjct: 240 AWSPDSKAVLYVSKKKFGTDYAVSTNTDIYRYDLSGKQTTNLTAGMNGYDTNPIYSPNGQ 299

Query: 315 QIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            + + S         K  + +   + S +  ++   + +    +WS     I FT     
Sbjct: 300 MLTWLSMKTEGYEADKNDIVLFDKSSSQRLNLTAHWDGTVNSFIWSKDNRKIYFTAPVKG 359

Query: 370 KFAIG 374
              + 
Sbjct: 360 TVQLF 364



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 84/245 (34%), Gaps = 27/245 (11%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K  L   +  G     LT    ++    +FSP+ + + ++      +++ Y    R    
Sbjct: 122 KGQLWKKNISGGAATQLTKGELELENV-KFSPDGKYILFSQAV---LIKKYHSPDRYPDL 177

Query: 250 PKRIGNFRSMILAPRFSS--NGKRAL-ISVQKDEAMDIYSVDLQSNAT---ERLTNTLFI 303
           PK        +    + +  NGK         D  +    VDL  +      ++      
Sbjct: 178 PKSDAYVFDNLDYRHWDTFNNGKFNHPFVATYDNGVIGEPVDLLQDEPYYSPQMPFGGAE 237

Query: 304 NISASYSPDSSQIVFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +   ++SPDS  +++ S +             +Y    +G     ++        +P++S
Sbjct: 238 DF--AWSPDSKAVLYVSKKKFGTDYAVSTNTDIYRYDLSGKQTTNLTAGMNGYDTNPIYS 295

Query: 356 PQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSR 408
           P G ++ +     E +      I +  K  SQ   L    D  + +  WS   R + F+ 
Sbjct: 296 PNGQMLTWLSMKTEGYEADKNDIVLFDKSSSQRLNLTAHWDGTVNSFIWSKDNRKIYFTA 355

Query: 409 KKDGD 413
              G 
Sbjct: 356 PVKGT 360



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 81/265 (30%), Gaps = 68/265 (25%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATE 295
             +        +      + A   +++GK  + +V + +        +++SV +      
Sbjct: 38  HQSNTTALTPEVLWKLGRVSAEGLTADGKTLIYAVSQYDFEQNSSERNLFSVAVTGGKAI 97

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             +           + +   I        K QL+    +G    ++++  E    +  +S
Sbjct: 98  PFSQEKGGESVVHIAENGDVIYLL-----KGQLWKKNISGGAATQLTK-GELELENVKFS 151

Query: 356 PQGDLIAFTK----------------------------------FSGEKFA---IGVMKK 378
           P G  I F++                                  F+  KF    +     
Sbjct: 152 PDGKYILFSQAVLIKKYHSPDRYPDLPKSDAYVFDNLDYRHWDTFNNGKFNHPFVATYDN 211

Query: 379 D--GSQERLLVED---------SNLQAPTWSPSGRSLIFSRKKDGD------TGSKLYSI 421
              G    LL ++            +   WSP  +++++  KK         T + +Y  
Sbjct: 212 GVIGEPVDLLQDEPYYSPQMPFGGAEDFAWSPDSKAVLYVSKKKFGTDYAVSTNTDIYRY 271

Query: 422 DLNGRNETLIN--TPAYASDPQWVG 444
           DL+G+  T +      Y ++P +  
Sbjct: 272 DLSGKQTTNLTAGMNGYDTNPIYSP 296



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 69/203 (33%), Gaps = 11/203 (5%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMD 243
                +   D  G     LT   +     P +SPN Q + + +   E    D   + L D
Sbjct: 263 STNTDIYRYDLSGKQTTNLTAGMNGYDTNPIYSPNGQMLTWLSMKTEGYEADKNDIVLFD 322

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV----DLQSN---ATER 296
               +      ++   + +  +S + ++   +      + ++ +    +L++      ++
Sbjct: 323 KSSSQRLNLTAHWDGTVNSFIWSKDNRKIYFTAPVKGTVQLFELTVPANLKTKAFPQIQQ 382

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +++  F         D++ IV  +      ++Y    +  + K ++   +  Y     + 
Sbjct: 383 ISSGEFDITGIVGQSDNALIVTSTKLTHAPEVYRYDLSKKELKPVTTVNDELYAGIYTNK 442

Query: 357 QGDLIAFTKFSGEKFAIGVMKKD 379
               +  T    + F+  V   D
Sbjct: 443 VASRVTRTSDGKDLFSWVVYPPD 465



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 55/190 (28%), Gaps = 19/190 (10%)

Query: 218 RFSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            +SP+ + V Y +       Y       +Y  D    +              P +S NG+
Sbjct: 240 AWSPDSKAVLYVSKKKFGTDYAVSTNTDIYRYDLSGKQTTNLTAGMNGYDTNPIYSPNGQ 299

Query: 271 RALISVQKDEAM-----DIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREG 324
                  K E       DI   D  S+    LT        S  +S D+ +I F +  +G
Sbjct: 300 MLTWLSMKTEGYEADKNDIVLFDKSSSQRLNLTAHWDGTVNSFIWSKDNRKIYFTAPVKG 359

Query: 325 KEQLYVM----QSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             QL+ +            +I Q    E      V      LI  +        +     
Sbjct: 360 TVQLFELTVPANLKTKAFPQIQQISSGEFDITGIVGQSDNALIVTSTKLTHAPEVYRYDL 419

Query: 379 DGSQERLLVE 388
              + + +  
Sbjct: 420 SKKELKPVTT 429


>gi|294666636|ref|ZP_06731874.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292603603|gb|EFF47016.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 293

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 68/214 (31%), Gaps = 25/214 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEA---MDIYSVDLQSN----ATERLTNTLFINI 305
           + +  +       S +G+R + +  +       D++   L+      A     NT     
Sbjct: 33  VVSTPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQDAQTLPINTAQDET 92

Query: 306 SASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSP 356
           +  +S D   ++F S R    G   LY    +        Q      D   +   P  S 
Sbjct: 93  TPFFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGAVGPVQSLGAAIDSAGNERAPTLSL 152

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT------WSPSGRSLIFS 407
            G  + F            + V   DG      V   ++ +        W   GR+L+++
Sbjct: 153 DGTRLLFASDGHGGAGGMDLFVAHWDGQAFSAPVALLDINSAADELDAAWLGDGRALVWA 212

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R K       L +I  +G     +  P   + PQ
Sbjct: 213 RGKTDGPSQLLLAICKDGHVAQGLPLPLSFNGPQ 246



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 24/170 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGS---DQKRISQDKEASYFDP 352
           +T      A+ SPD  +IV+ SDR    G   L+  Q  G    D + +  +       P
Sbjct: 35  STPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQDAQTLPINTAQDETTP 94

Query: 353 VWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLVED--------SNLQAPTWSPSG 401
            +S  G  + F            +     D       V+          N +APT S  G
Sbjct: 95  FFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGAVGPVQSLGAAIDSAGNERAPTLSLDG 154

Query: 402 RSLIFSRK-KDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
             L+F+     G  G  L+    +G+  +       IN+ A   D  W+G
Sbjct: 155 TRLLFASDGHGGAGGMDLFVAHWDGQAFSAPVALLDINSAADELDAAWLG 204



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 72/200 (36%), Gaps = 24/200 (12%)

Query: 220 SPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ Q++ +A+         D+ +  L   R   A     N       P FS++G+  L 
Sbjct: 46  SPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQDAQTLPINTAQDETTPFFSADGRWLLF 105

Query: 275 SVQKDEAM---DIYSVDLQS----NATERL---TNTLFINISASYSPDSSQIVFESD--- 321
           +  +       D+Y   + +       + L    ++     + + S D ++++F SD   
Sbjct: 106 ASTRPGGAGGSDLYRAPVDAQGAVGPVQSLGAAIDSAGNERAPTLSLDGTRLLFASDGHG 165

Query: 322 REGKEQLYVMQSNG----SDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGV 375
             G   L+V   +G    +    +  +  A   D  W   G  + + +    G    +  
Sbjct: 166 GAGGMDLFVAHWDGQAFSAPVALLDINSAADELDAAWLGDGRALVWARGKTDGPSQLLLA 225

Query: 376 MKKDGSQERLLVEDSNLQAP 395
           + KDG   + L    +   P
Sbjct: 226 ICKDGHVAQGLPLPLSFNGP 245



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 51/165 (30%), Gaps = 19/165 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--- 234
           +     G     L      G    + + L  +  Q    P FS + + + +A+       
Sbjct: 55  ASDRAGGAGGWDLWQAQLRGGRWQDAQTLPINTAQDETTPFFSADGRWLLFASTRPGGAG 114

Query: 235 --DILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEAM---DIYS 286
             D+ R  +         + +G   +      AP  S +G R L +          D++ 
Sbjct: 115 GSDLYRAPVDAQGAVGPVQSLGAAIDSAGNERAPTLSLDGTRLLFASDGHGGAGGMDLFV 174

Query: 287 VDLQS---NATERL--TNTLFINISASYSPDSSQIVFESDREGKE 326
                   +A   L   N+    + A++  D   +V+   +    
Sbjct: 175 AHWDGQAFSAPVALLDINSAADELDAAWLGDGRALVWARGKTDGP 219


>gi|158313705|ref|YP_001506213.1| WD-40 repeat-containing serine/threonin protein kinase [Frankia sp.
           EAN1pec]
 gi|158109110|gb|ABW11307.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EAN1pec]
          Length = 716

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 81/243 (33%), Gaps = 23/243 (9%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + LT   D +     FSP+   +A ++ D    L      TR     + +      +++ 
Sbjct: 404 QPLTDHTDWVASV-AFSPDGHTLASSSKDTTVRLWDITDRTRPHPLGQPLAGHTLGVMSV 462

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFES 320
            FS +G     S  +D  + ++ +  ++      + LT       S ++  D   +   S
Sbjct: 463 AFSPDGNTLA-SSSRDTTIRLWDITDRTRPHPLGQPLTGHTDAVTSVAFFSDGRTLA-SS 520

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW------SPQGDLIAFTKFSGEKFAIG 374
            R+   +L+    + +D+ R             W      +  G  +A +          
Sbjct: 521 SRDTTIRLW----DITDRTRTRPLGSPLSGHSDWVTSLALTMDGRTLASSSLDSTVRLWN 576

Query: 375 VMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +  +   Q     L      + +  +S   R+L        DT  +L+ +  +     L+
Sbjct: 577 MADRSHPQPIGLPLTGHTGGVNSVAFSLDSRTLA---SSGRDTTIRLWDV-TDRSTPRLL 632

Query: 432 NTP 434
             P
Sbjct: 633 GAP 635



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 52/154 (33%), Gaps = 11/154 (7%)

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--RISQDKEASYFDP 352
           + LT+      S ++SPD   +   S ++   +L+ +          +            
Sbjct: 404 QPLTDHTDWVASVAFSPDGHTLA-SSSKDTTVRLWDITDRTRPHPLGQPLAGHTLGVMSV 462

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            +SP G+ +A +          +  +       + L      + +  +   GR+L  S +
Sbjct: 463 AFSPDGNTLASSSRDTTIRLWDITDRTRPHPLGQPLTGHTDAVTSVAFFSDGRTLASSSR 522

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              DT  +L+  D+  R  T       +    WV
Sbjct: 523 ---DTTIRLW--DITDRTRTRPLGSPLSGHSDWV 551


>gi|87198210|ref|YP_495467.1| peptidase S9, prolyl oligopeptidase active site region
           [Novosphingobium aromaticivorans DSM 12444]
 gi|87133891|gb|ABD24633.1| peptidase S9, prolyl oligopeptidase active site region
           [Novosphingobium aromaticivorans DSM 12444]
          Length = 698

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 106/301 (35%), Gaps = 45/301 (14%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA---- 229
           +  + ++S+  V    +  +  +D        +T     +      SP+ +++A      
Sbjct: 96  DGALYYLSDRKVGESERTQVWKVDPATDVTAQVTAFATDVAGF-ELSPDGKRIAVWGDIA 154

Query: 230 ----TYDDEDILRVYLMDTRIDRAPKRIGNF------------RSMILAPRFSSNGKRAL 273
               T+  E      L      R  K    F             S + A     +GK   
Sbjct: 155 RTCPTFGCESDGNTALPGPGTGRHYKDGAGFVRHWDAWETPGNYSRVFAFDIGPDGK--- 211

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ------ 327
               + +A D     L  ++  +       ++  ++S DS  + F + +  + +      
Sbjct: 212 -VTGEGKAADGPVGTLTGDSPVK-PFGGGEDV--AWSADSQSLFFVARQADRNEPTSTNL 267

Query: 328 -LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGS 381
            ++  + +G+    +++  +A+   P  SP G  +A+   +   +      + ++     
Sbjct: 268 DIWHSKLDGTAPTNLTEANKATDNTPAPSPDGKWLAYAAMARPGYEADRLVVNLVNLQTG 327

Query: 382 QERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYAS 438
           + R L    +    +  W+P G++LI + +   DT +  + ID  +G+   L+  P    
Sbjct: 328 ERRELTGAWDRSVASLAWTPDGKALIATAEDVLDTPA--FRIDPASGKVTRLVLNPGREG 385

Query: 439 D 439
            
Sbjct: 386 H 386



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 80/269 (29%), Gaps = 48/269 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILR----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             S +   +AY     + +         +       P+RI +       P F  +G    
Sbjct: 43  AISRDGNMIAYVVTTTDPVSYKRTPSLWVKPAGKGEPRRI-DTAGSASDPAFGPDGALYY 101

Query: 274 ISVQKDE---AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-----------FE 319
           +S +K        ++ VD  ++ T ++T           SPD  +I            F 
Sbjct: 102 LSDRKVGESERTQVWKVDPATDVTAQVTAFATDVAGFELSPDGKRIAVWGDIARTCPTFG 161

Query: 320 SDREGK-----EQLYVMQSNGSDQKR-----ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            + +G              +G+   R      +    +  F     P G         G+
Sbjct: 162 CESDGNTALPGPGTGRHYKDGAGFVRHWDAWETPGNYSRVFAFDIGPDGK----VTGEGK 217

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLN 424
                V    G            +   WS   +SL F  ++        T   ++   L+
Sbjct: 218 AADGPVGTLTGDSPVKPFGGG--EDVAWSADSQSLFFVARQADRNEPTSTNLDIWHSKLD 275

Query: 425 GR--------NETLINTPAYASDPQWVGF 445
           G         N+   NTPA + D +W+ +
Sbjct: 276 GTAPTNLTEANKATDNTPAPSPDGKWLAY 304



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 54/158 (34%), Gaps = 8/158 (5%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRID 247
            +     DG     LT +       P  SP+ + +AYA         D L V L++ +  
Sbjct: 268 DIWHSKLDGTAPTNLTEANKATDNTPAPSPDGKWLAYAAMARPGYEADRLVVNLVNLQTG 327

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS- 306
              +  G +   + +  ++ +GK  + + +       + +D  S    RL          
Sbjct: 328 ERRELTGAWDRSVASLAWTPDGKALIATAEDVLDTPAFRIDPASGKVTRLVLNPGREGHV 387

Query: 307 ASYSP--DSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +  P  D  ++++  D         +   G    R++
Sbjct: 388 GNVVPLKDG-RLLYTRDTIDAPAELYIGKPGKGGTRLT 424



 Score = 37.3 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 30/81 (37%), Gaps = 9/81 (11%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                S  G++IA+   + +  +      + V      + R +    +   P + P G +
Sbjct: 40  GGTAISRDGNMIAYVVTTTDPVSYKRTPSLWVKPAGKGEPRRIDTAGSASDPAFGPDG-A 98

Query: 404 LIFSRKK--DGDTGSKLYSID 422
           L +   +       ++++ +D
Sbjct: 99  LYYLSDRKVGESERTQVWKVD 119


>gi|42522222|ref|NP_967602.1| hypothetical protein Bd0632 [Bdellovibrio bacteriovorus HD100]
 gi|39574753|emb|CAE78595.1| hypothetical protein with similarity to TolB [Bdellovibrio
           bacteriovorus HD100]
          Length = 984

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 80/215 (37%), Gaps = 38/215 (17%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-----RLTNT------LFI 303
           N    + AP  S +GK   +  + D       +  +    +     R+T+T       FI
Sbjct: 305 NNFQSVSAPAISPDGKHLALITEDDGNSRAVKILTKEKEGQSFLDSRMTDTIERFSESFI 364

Query: 304 -----NISA-------SYSPDSSQIV-----FESDREGKEQLYVMQSNGSDQKRISQDKE 346
                +          S+ PDS +++     + +  +    L+V +      K +++   
Sbjct: 365 PATQKDGPPTGSIQRISWFPDSKRLIYDKIDYTNRIQRYSDLFVYELGERKAKALTKGLR 424

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ---ERLLVEDS---NLQAPTWSPS 400
               +P  SP G+ + F K  G +  +G+++  G +     LL        +  PT+   
Sbjct: 425 G--REPAVSPSGNQVVFVKLDGNRTHLGLLRLTGEKNPSSELLFSPPMQQRVSYPTFL-D 481

Query: 401 GRSLIFS-RKKDGDTGSKLYSIDLNGRNETLINTP 434
             +++FS R +DG      YSI        L + P
Sbjct: 482 EDTIVFSLRTEDGRENLHRYSISTKTSEAVLTDYP 516


>gi|312138644|ref|YP_004005980.1| hypothetical protein REQ_11980 [Rhodococcus equi 103S]
 gi|311887983|emb|CBH47295.1| putative secreted protein [Rhodococcus equi 103S]
          Length = 1335

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 45/317 (14%), Positives = 111/317 (35%), Gaps = 37/317 (11%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKD-RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
            G V+    D   V  R+WD+ D  + +   +  +       +AH++S            D
Sbjct: 826  GTVMATSSDDRTV--RVWDIADPARPVQVGRDLTGFDD---VAHSVS---------FSPD 871

Query: 173  FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
              +      + ++      +L  + + GA ++    +    ++   F+ +   +A A++D
Sbjct: 872  GTTLAASSDDGMIRVFDATNLADIRQVGAPVQ----AHTGGIWTVAFAADGSTLASASWD 927

Query: 233  -DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                +  V      +      +      + A   S +G   + +  +D  + ++++   +
Sbjct: 928  GTAKLWSVDPGTRAVHELRPALSGNGGGVPALALSPDGTTIV-TGGQDSIVRMWTLPAGT 986

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                 +  +       S + D S++V  +  + + +L+ + + G   +  + +       
Sbjct: 987  -----VPVSDASMTLPSINSDGSRVV-TAGYDSQVRLWKVSAAGEMDRAGTIELPRPLGG 1040

Query: 352  PVW---SPQGDLIAFTKFSGEKFAIGVM----KKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                  SP G ++A T+ SG    +  +            +           +SP GR+L
Sbjct: 1041 GNVVELSPDGKVLATTQTSGGHVQLWDVADPEHPAALGAPITTATRFTWEMAFSPDGRTL 1100

Query: 405  IFSRKKDGDTGSKLYSI 421
                  D D    L+ +
Sbjct: 1101 AIG---DDDFSVALWDV 1114



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 19/224 (8%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ + +A    D    L          R  +R+   R+++ +  F  +G   L++  
Sbjct: 1092 AFSPDGRTLAIGDDDFSVALWDVQDPRNPVRLGERLTGPRNLVRSVAFGPDGD-VLVASS 1150

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSN 334
             D  +  + V                +      S+ PD   +V  SD +    L+    +
Sbjct: 1151 ADGDIYAWDVSTPEKPASLPVRAGGHDGGVNALSFGPDGDTLVTASD-DHTLVLWDRDDD 1209

Query: 335  GSDQKR--ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER------LL 386
            G    R    +    + +   +   G  +      G    + +   DG+ E       L 
Sbjct: 1210 GGFTPRPVPLRGHTGTVYSVAFGGDGTHVVSGSDDGS---VRLWNVDGAGEAEEVGGPLT 1266

Query: 387  VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
               +      + P   ++I S    GD   + + +D +     +
Sbjct: 1267 TIGTGRWQVAFLPRTDTVIAS---GGDGVLRTWRLDEDPITARI 1307



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 53/164 (32%), Gaps = 13/164 (7%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A+      D     L+ T      + +      +    FS++G+    +   D ++ ++ 
Sbjct: 647 AWRMRPGSDDAFSRLVATETTPISRSLTGHTGPVYGVAFSADGRTLA-TASDDRSVRLWD 705

Query: 287 VDLQSNATER----LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +    +   +    LT       S S+SPD   +       G   +++         R  
Sbjct: 706 L-ADGSVPVQIGQELTGPDQYMASVSFSPDGHLLAAG---GGDGTMWIWDIGDRSAPRAL 761

Query: 343 ----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               ++   +  +  +SP G L+A     G        K D  +
Sbjct: 762 MSGQRNAPGAVHNVRFSPDGRLLAVPHDDGTVTLFDTTKPDSGE 805



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 65/214 (30%), Gaps = 13/214 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  ++   FS + + +A A+ D    L      +   +  + +      + +  FS
Sbjct: 673 LTGHTGPVYGVAFSADGRTLATASDDRSVRLWDLADGSVPVQIGQELTGPDQYMASVSFS 732

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESD 321
            +G     +   D  M I+  D+   +  R       N      +  +SPD   +    D
Sbjct: 733 PDGHLLA-AGGGDGTMWIW--DIGDRSAPRALMSGQRNAPGAVHNVRFSPDGRLLAVPHD 789

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                     + +  +    +  +  S      S +G  +  T        +  +     
Sbjct: 790 DGTVTLFDTTKPDSGEFPAFT-LRAHSGAVRTVSFRGGTVMATSSDDRTVRVWDIADPAR 848

Query: 382 QERL---LVE-DSNLQAPTWSPSGRSLIFSRKKD 411
             ++   L   D    + ++SP G +L  S    
Sbjct: 849 PVQVGRDLTGFDDVAHSVSFSPDGTTLAASSDDG 882



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 105/360 (29%), Gaps = 50/360 (13%)

Query: 107  GAQVLVTGRVIKEGKDRLRVEFRLWDVKDR-------KQIIGKKFFSSPASWRKIAHTIS 159
            G      GR +    D   V  RLWD+ D        +++ G   + +  S+    H ++
Sbjct: 682  GVAFSADGRTLATASDDRSV--RLWDLADGSVPVQIGQELTGPDQYMASVSFSPDGHLLA 739

Query: 160  D----------DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
                       DI             R    +   V       L  +  D   +     +
Sbjct: 740  AGGGDGTMWIWDIGDRSAPRALMSGQRNAPGAVHNVRFSPDGRLLAVPHDDGTVTLFDTT 799

Query: 210  RDQILFEPRF-----SPNQQKVAY----ATYDDEDILRVYLMDTRIDRAP----KRIGNF 256
            +      P F     S   + V++          D   V + D      P    + +  F
Sbjct: 800  KPDSGEFPAFTLRAHSGAVRTVSFRGGTVMATSSDDRTVRVWDIADPARPVQVGRDLTGF 859

Query: 257  RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS----NATERLTNTLFINISASYSPD 312
              +  +  FS +G     S          + +L       A  +         + +++ D
Sbjct: 860  DDVAHSVSFSPDGTTLAASSDDGMIRVFDATNLADIRQVGAPVQ--AHTGGIWTVAFAAD 917

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---VWSPQGDLIAFTKFSGE 369
             S +   S  +G  +L+ +         +      +         SP G  I  T     
Sbjct: 918  GSTLASAS-WDGTAKLWSVDPGTRAVHELRPALSGNGGGVPALALSPDGTTIV-TGGQDS 975

Query: 370  KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
               +  +        + V D+++  P+ +  G  ++ +     D+  +L+ +   G  + 
Sbjct: 976  IVRMWTLPAGT----VPVSDASMTLPSINSDGSRVVTAGY---DSQVRLWKVSAAGEMDR 1028



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 75/226 (33%), Gaps = 26/226 (11%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQI--IGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
            GR +  G D   V   LWDV+D +    +G++        R +A     D+   +     
Sbjct: 1097 GRTLAIGDDDFSVA--LWDVQDPRNPVRLGERLTGPRNLVRSVAFGPDGDV---LVASSA 1151

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            D +     VS       +                     D  +    F P+   +  A+ 
Sbjct: 1152 DGDIYAWDVSTPEKPASLPVR--------------AGGHDGGVNALSFGPDGDTLVTASD 1197

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D   +L     D      P  +      + +  F  +G   ++S   D ++ +++VD   
Sbjct: 1198 DHTLVLWDRDDDGGFTPRPVPLRGHTGTVYSVAFGGDGTH-VVSGSDDGSVRLWNVDGAG 1256

Query: 292  NATE---RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             A E    LT         ++ P +  ++  S  +G  + + +  +
Sbjct: 1257 EAEEVGGPLTTIGTGRWQVAFLPRTDTVI-ASGGDGVLRTWRLDED 1301


>gi|294626701|ref|ZP_06705296.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598949|gb|EFF43091.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 293

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 68/214 (31%), Gaps = 25/214 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEA---MDIYSVDLQSN----ATERLTNTLFINI 305
           + +  +       S +G+R + +  +       D++   L+      A     NT     
Sbjct: 33  VVSTPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQDAQTLPINTAQDET 92

Query: 306 SASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSP 356
           +  +S D   ++F S R    G   LY    +        Q      D   +   P  S 
Sbjct: 93  TPFFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGAVGPVQSLGAAIDSAGNERAPTLSL 152

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT------WSPSGRSLIFS 407
            G  + F            + V   DG      V   ++ +        W   GR+L+++
Sbjct: 153 DGTRLLFASDGHGGAGGMDLFVAHWDGQAFSAPVALLDINSAADELDAAWLGDGRALVWA 212

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R K       L +I  +G     +  P   + PQ
Sbjct: 213 RGKTDGPSQLLLAICKDGHVAQGLPLPLSFNGPQ 246



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 24/170 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGS---DQKRISQDKEASYFDP 352
           +T      A+ SPD  +IV+ SDR    G   L+  Q  G    D + +  +       P
Sbjct: 35  STPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQDAQTLPINTAQDETTP 94

Query: 353 VWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLVED--------SNLQAPTWSPSG 401
            +S  G  + F            +     D       V+          N +APT S  G
Sbjct: 95  FFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGAVGPVQSLGAAIDSAGNERAPTLSLDG 154

Query: 402 RSLIFSRK-KDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
             L+F+     G  G  L+    +G+  +       IN+ A   D  W+G
Sbjct: 155 TRLLFASDGHGGAGGMDLFVAHWDGQAFSAPVALLDINSAADELDAAWLG 204



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 72/200 (36%), Gaps = 24/200 (12%)

Query: 220 SPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ Q++ +A+         D+ +  L   R   A     N       P FS++G+  L 
Sbjct: 46  SPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQDAQTLPINTAQDETTPFFSADGRWLLF 105

Query: 275 SVQKDEAM---DIYSVDLQS----NATERL---TNTLFINISASYSPDSSQIVFESD--- 321
           +  +       D+Y   + +       + L    ++     + + S D ++++F SD   
Sbjct: 106 ASTRPGGAGGSDLYRAPVDAQGAVGPVQSLGAAIDSAGNERAPTLSLDGTRLLFASDGHG 165

Query: 322 REGKEQLYVMQSNG----SDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGV 375
             G   L+V   +G    +    +  +  A   D  W   G  + + +    G    +  
Sbjct: 166 GAGGMDLFVAHWDGQAFSAPVALLDINSAADELDAAWLGDGRALVWARGKTDGPSQLLLA 225

Query: 376 MKKDGSQERLLVEDSNLQAP 395
           + KDG   + L    +   P
Sbjct: 226 ICKDGHVAQGLPLPLSFNGP 245



 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 51/165 (30%), Gaps = 19/165 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--- 234
           +     G     L      G    + + L  +  Q    P FS + + + +A+       
Sbjct: 55  ASDRAGGAGGWDLWQAQLRGGRWQDAQTLPINTAQDETTPFFSADGRWLLFASTRPGGAG 114

Query: 235 --DILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEAM---DIYS 286
             D+ R  +         + +G   +      AP  S +G R L +          D++ 
Sbjct: 115 GSDLYRAPVDAQGAVGPVQSLGAAIDSAGNERAPTLSLDGTRLLFASDGHGGAGGMDLFV 174

Query: 287 VDLQS---NATERL--TNTLFINISASYSPDSSQIVFESDREGKE 326
                   +A   L   N+    + A++  D   +V+   +    
Sbjct: 175 AHWDGQAFSAPVALLDINSAADELDAAWLGDGRALVWARGKTDGP 219


>gi|113477484|ref|YP_723545.1| WD-40 repeat-containing serine/threonine protein kinase
           [Trichodesmium erythraeum IMS101]
 gi|110168532|gb|ABG53072.1| serine/threonine protein kinase with WD40 repeats [Trichodesmium
           erythraeum IMS101]
          Length = 792

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 70/210 (33%), Gaps = 23/210 (10%)

Query: 217 PRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           P +S    P+ + VA ++ D     RV + + +         +    I +   SS+GK+ 
Sbjct: 597 PIWSVVMSPDDEIVASSSGDK----RVKVWNLKTGSLIFSFPDHSDTIYSIDISSDGKKL 652

Query: 273 LISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           + S   D+ + I   DL +      L        S   +PD  +IV  S       + + 
Sbjct: 653 V-SGSADQTIKIE--DLDTGDLINTLNGHTGAIRSVKITPDGKKIVSGSY---DTTVKIW 706

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                   +      A       S  G  IA     G+   I V   +  +    +    
Sbjct: 707 DLKTGKLIKTLSGHTAEVISVDISRDGRYIA---SGGKDNNIKVWDLEKGELLNTLTGHT 763

Query: 392 LQAPT--WSPSGRSLIFSRKKDGDTGSKLY 419
            +  T  +SP G S+        D   KL+
Sbjct: 764 DEVYTVAFSPDGNSIA---SGGKDRTIKLW 790



 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 81/233 (34%), Gaps = 21/233 (9%)

Query: 135 DRKQIIGKKFFSSPASWRKIA---HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           D  Q++   ++     WR +     T++++ +Q        ++  +    E V S     
Sbjct: 563 DATQLVAGTYY-----WRVMIWNVPTVAEEPFQIFEHRAPIWSVVMSPDDEIVASSSGDK 617

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + V +    ++ +  P     ++    S + +K+   + D      + + D        
Sbjct: 618 RVKVWNLKTGSLIFSFPDHSDTIYSIDISSDGKKLVSGSADQ----TIKIEDLDTGDLIN 673

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYS 310
            +      I + + + +GK+ + S   D  + I+  DL++    + L+      IS   S
Sbjct: 674 TLNGHTGAIRSVKITPDGKKIV-SGSYDTTVKIW--DLKTGKLIKTLSGHTAEVISVDIS 730

Query: 311 PDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            D   I       GK   + V      +            +   +SP G+ IA
Sbjct: 731 RDGRYIA----SGGKDNNIKVWDLEKGELLNTLTGHTDEVYTVAFSPDGNSIA 779



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 82/240 (34%), Gaps = 20/240 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT- 244
           +G  + ++ +++     +    P+ D I++   F+ +  ++   TY      RV + +  
Sbjct: 527 TGSRETTVKILEIPTGKVINTFPADDSIIWSVAFNSDATQLVAGTYY----WRVMIWNVP 582

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFI 303
            +   P +I   R+ I +   S +    + S   D+ + ++  +L++ +      +    
Sbjct: 583 TVAEEPFQIFEHRAPIWSVVMSPD-DEIVASSSGDKRVKVW--NLKTGSLIFSFPDHSDT 639

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S   S D  ++V  S     + + +   +  D          +      +P G  I  
Sbjct: 640 IYSIDISSDGKKLVSGS---ADQTIKIEDLDTGDLINTLNGHTGAIRSVKITPDGKKIVS 696

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
             +      + +      +    +     +  +   S  GR +        D   K++ +
Sbjct: 697 GSYDTT---VKIWDLKTGKLIKTLSGHTAEVISVDISRDGRYIA---SGGKDNNIKVWDL 750



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 27/247 (10%), Positives = 65/247 (26%), Gaps = 58/247 (23%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRAL--------------------------------- 273
           +   +    + + + +  FS +GK                                    
Sbjct: 500 NYQVEDFSQYLAAVSSVVFSPDGKMLATGSRETTVKILEIPTGKVINTFPADDSIIWSVA 559

Query: 274 --------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
                   ++      + I++V   +    ++        S   SPD   +   S   G 
Sbjct: 560 FNSDATQLVAGTYYWRVMIWNVPTVAEEPFQIFEHRAPIWSVVMSPDDEIVASSS---GD 616

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +++ V             D   + +    S  G  +           I +   D      
Sbjct: 617 KRVKVWNLKTGSLIFSFPDHSDTIYSIDISSDGKKLVSGSADQT---IKIEDLDTGDLIN 673

Query: 386 LV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA------ 437
            +      +++   +P G+ ++       DT  K++ +      +TL    A        
Sbjct: 674 TLNGHTGAIRSVKITPDGKKIVSGSY---DTTVKIWDLKTGKLIKTLSGHTAEVISVDIS 730

Query: 438 SDPQWVG 444
            D +++ 
Sbjct: 731 RDGRYIA 737



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 39/126 (30%), Gaps = 6/126 (4%)

Query: 161 DIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+  ++ G  G   S  +    + +VSG    ++ + D     +          +     
Sbjct: 670 DLINTLNGHTGAIRSVKITPDGKKIVSGSYDTTVKIWDLKTGKLIKTLSGHTAEVISVDI 729

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + +A           + + D         +      +    FS +G     S  KD
Sbjct: 730 SRDGRYIA----SGGKDNNIKVWDLEKGELLNTLTGHTDEVYTVAFSPDGNSIA-SGGKD 784

Query: 280 EAMDIY 285
             + ++
Sbjct: 785 RTIKLW 790


>gi|299140576|ref|ZP_07033714.1| prolyl oligopeptidase family protein [Prevotella oris C735]
 gi|298577542|gb|EFI49410.1| prolyl oligopeptidase family protein [Prevotella oris C735]
          Length = 709

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 82/258 (31%), Gaps = 63/258 (24%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATE 295
           M  + D     +      I     S +GK  +  V             ++  D       
Sbjct: 18  MKLQSDLMTPEVLWGMGRIGGASPSPDGKSIVYQVSYYSVEENKSHTMLFVQDANRKNKR 77

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +LT        A +     +I F   R+G  +++VM ++G +++++S   + S     +S
Sbjct: 78  QLTMDNKNESDAVWIGGGQRIAFL--RDG--EIWVMTADGKNRQQLSH-TQGSIEGFAFS 132

Query: 356 PQGDLIAFTK-------------------------FSGEKFAIGV----------MKKDG 380
           P    + + K                          +   +   V          +  +G
Sbjct: 133 PDEKKVVYIKSIPYHGTIRQNPSDLPKATGLRITDMNYRHWDHYVETIAHPFVADVTANG 192

Query: 381 -SQERLLVEDSNLQAP----------TWSPSGRSLIFSRKKDGD------TGSKLYSIDL 423
            ++ + ++E    ++P           WS   +S+ ++ +K         T + +Y   L
Sbjct: 193 INEGKDIMEGEPYESPVAPFGGIGQLAWSTDSKSIAYTSRKKEGTQYAISTDTDIYLYCL 252

Query: 424 NGRNETLINTPAYASDPQ 441
                T +  P    +P+
Sbjct: 253 TTGKTTNLCKPEGYQEPK 270



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 57/388 (14%), Positives = 106/388 (27%), Gaps = 105/388 (27%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            G        +    +V +  + V++ K            + RK    ++ D        
Sbjct: 36  IGGASPSPDGKSIVYQVSY--YSVEENK---SHTMLFVQDANRKNKRQLTMDNKNESDAV 90

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
                 RI F+            + VM  DG N + L+ ++  I     FSP+++KV Y 
Sbjct: 91  WIGGGQRIAFL--------RDGEIWVMTADGKNRQQLSHTQGSIEGF-AFSPDEKKVVYI 141

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFR----------------------SMI------- 260
                                 RI +                         +        
Sbjct: 142 KSIPYHGTIRQNPSDLPKATGLRITDMNYRHWDHYVETIAHPFVADVTANGINEGKDIME 201

Query: 261 -------LAP-------RFSSNGKRALISVQKDEAM--------DIYSVDLQSNATERLT 298
                  +AP        +S++ K    + +K E          DIY   L +  T  L 
Sbjct: 202 GEPYESPVAPFGGIGQLAWSTDSKSIAYTSRKKEGTQYAISTDTDIYLYCLTTGKTTNLC 261

Query: 299 NTLFINISASYSP----DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                               Q    + + G  Q+                      +P +
Sbjct: 262 KPEGYQ-EPKIDATKTMKGQQ---VNHQNGYMQV------------------GYDVNPKF 299

Query: 355 SPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLI 405
           SP G  I++     + +      + +M+    ++  L+     DSN+    W+   +S+ 
Sbjct: 300 SPDGKYISWQSMEHDGYESDLNRLCIMEISTGKKHYLIHKDNFDSNVDEYVWANDSKSVY 359

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINT 433
           F           +Y   L G+   L + 
Sbjct: 360 FLGC--WHACINVYQATLEGKVMQLTDG 385


>gi|289770517|ref|ZP_06529895.1| WD-40 repeat protein [Streptomyces lividans TK24]
 gi|289700716|gb|EFD68145.1| WD-40 repeat protein [Streptomyces lividans TK24]
          Length = 375

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 61/317 (19%), Positives = 104/317 (32%), Gaps = 36/317 (11%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             RLWDV D  + +       P            DI   +    G         + +V+ 
Sbjct: 54  RVRLWDVTDPGRPVSLSAPFEPGDG---------DIRSLVFSPDGG--------TLAVLV 96

Query: 187 GIIKNSLC-VMDRDGANIRYLTPSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYLM 242
           G     L  V D  G        +       P    FSP+ + +A A  D    L     
Sbjct: 97  GGRALQLWDVTDPAGPTAHGPPVALSTRYAGPDTLAFSPDGRTLATAHDDRTIQLWNADD 156

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----T 298
            +R  R  K +      +    FS +G+    S   D+A+ ++ V        RL    T
Sbjct: 157 PSRPRRLGKPLTGHSGYVNTLAFSPDGRTLA-SGGADDAVRLWDV-TDPAHATRLGAART 214

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSP 356
             L      +YSPD   +   SD +G  +L+ +   G      +     +       +S 
Sbjct: 215 GHLGPVNVLAYSPDGHTLASGSD-DGTVRLWDVTEPGEASGAGTTLAGHTDSVVSLTFSQ 273

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD 413
            GD +A            V     +    R +  ++   +  ++SP    L  S    G 
Sbjct: 274 DGDTLASGANDNTVRLWSVTDPAEAAPIGRAMTPNAKTGSFLSFSPVSHMLGVSS---GT 330

Query: 414 TGSKLYSIDLNGRNETL 430
              +L+S+D++   + +
Sbjct: 331 DSVRLWSLDVDDAIDRI 347



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 73/239 (30%), Gaps = 21/239 (8%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +   T   D+      F P+   +A A  D    L       R              
Sbjct: 22  GPPVSLPTSGHDRPHR--AFRPDGHVLATAARDGRVRLWDVTDPGRPVSLSAPFEPGDGD 79

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSV-----DLQSNATERLTNTLFINISASYSPDSS 314
           I +  FS +G    + +    A+ ++ V              L+       + ++SPD  
Sbjct: 80  IRSLVFSPDGGTLAV-LVGGRALQLWDVTDPAGPTAHGPPVALSTRYAGPDTLAFSPDGR 138

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            +   +  +   QL+    + S  +R+               +SP G  +A +  + +  
Sbjct: 139 TLA-TAHDDRTIQLWNAD-DPSRPRRLGKPLTGHSGYVNTLAFSPDGRTLA-SGGADDAV 195

Query: 372 AIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +  +       RL    +    P     +SP G +L        D   +L+ +   G 
Sbjct: 196 RLWDVTDPAHATRLGAARTGHLGPVNVLAYSPDGHTLASGSD---DGTVRLWDVTEPGE 251


>gi|258655203|ref|YP_003204359.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Nakamurella multipartita DSM 44233]
 gi|258558428|gb|ACV81370.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Nakamurella multipartita DSM 44233]
          Length = 635

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 80/241 (33%), Gaps = 28/241 (11%)

Query: 215 FEPRFSPNQQKVAYATYDDE-DILRVYLMDTRI---DRAPKRIGNFRSMILAPRFSSNGK 270
           + P  SP+ +++AY T       L V  +DT     DR P+++      +++  +S +G+
Sbjct: 31  WCPSISPDGRQIAYVTDRSGLPRLEVAHLDTAGECADRTPRQVSLPDQEVISVAWSPDGQ 90

Query: 271 RALISVQKDE--AMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFE--SDREG 324
                V        +++++         L     +    + +++       F     R  
Sbjct: 91  WLAYLVSPRGFIRAELHAIRPDGTDHRALAGLADLETAFAGTWTSLPHTYAFSLADGRSP 150

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK------- 377
              +  +       +R++            SP    +   +    +  + +         
Sbjct: 151 DADVCFVDVQTGAVRRVATGGF--LLVTGVSPDATRVLARRGPRGRRHLVLADVPPIADA 208

Query: 378 KDGSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNET 429
                 RLL  D  ++         +S  G ++ + R   G     L ++DL  +GR   
Sbjct: 209 PLTPPRRLLEADFPVEGTDVAEDGRFSADGGTV-YLRVGAGREHPALGAVDLDPDGRPGR 267

Query: 430 L 430
           L
Sbjct: 268 L 268



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 58/173 (33%), Gaps = 11/173 (6%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------NATERLTNTLFINISASYSPDS 313
              P  S +G++      +     +    L +          +++      IS ++SPD 
Sbjct: 30  SWCPSISPDGRQIAYVTDRSGLPRLEVAHLDTAGECADRTPRQVSLPDQEVISVAWSPDG 89

Query: 314 SQIVFESDREG--KEQLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEK 370
             + +     G  + +L+ ++ +G+D + ++   +  + F   W+      AF+   G  
Sbjct: 90  QWLAYLVSPRGFIRAELHAIRPDGTDHRALAGLADLETAFAGTWTSLPHTYAFSLADGRS 149

Query: 371 FAIGV--MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               V  +       R +     L     SP    ++  R   G     L  +
Sbjct: 150 PDADVCFVDVQTGAVRRVATGGFLLVTGVSPDATRVLARRGPRGRRHLVLADV 202



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 52/143 (36%), Gaps = 16/143 (11%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-----KRISQDKEASYFDPVWSPQGDLI 361
            S SPD  QI + +DR G  +L V   + + +      R     +       WSP G  +
Sbjct: 33  PSISPDGRQIAYVTDRSGLPRLEVAHLDTAGECADRTPRQVSLPDQEVISVAWSPDGQWL 92

Query: 362 AFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL------IFSRKKDGD 413
           A+        +  +  ++ DG+  R L   ++L+   ++  G          FS      
Sbjct: 93  AYLVSPRGFIRAELHAIRPDGTDHRALAGLADLET-AFA--GTWTSLPHTYAFSLADGRS 149

Query: 414 TGSKLYSIDLNGRNETLINTPAY 436
             + +  +D+       + T  +
Sbjct: 150 PDADVCFVDVQTGAVRRVATGGF 172



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 7/94 (7%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-------RLLVEDSNLQAPTWSPSGR 402
           + P  SP G  IA+         + V   D + E       ++ + D  + +  WSP G+
Sbjct: 31  WCPSISPDGRQIAYVTDRSGLPRLEVAHLDTAGECADRTPRQVSLPDQEVISVAWSPDGQ 90

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            L +     G   ++L++I  +G +   +   A 
Sbjct: 91  WLAYLVSPRGFIRAELHAIRPDGTDHRALAGLAD 124



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 11/65 (16%)

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG----RNETLINTP-------AYASDPQ 441
             P+ SP GR + +   + G    ++  +D  G    R    ++ P       A++ D Q
Sbjct: 31  WCPSISPDGRQIAYVTDRSGLPRLEVAHLDTAGECADRTPRQVSLPDQEVISVAWSPDGQ 90

Query: 442 WVGFM 446
           W+ ++
Sbjct: 91  WLAYL 95


>gi|154495083|ref|ZP_02034088.1| hypothetical protein PARMER_04130 [Parabacteroides merdae ATCC
           43184]
 gi|154085633|gb|EDN84678.1| hypothetical protein PARMER_04130 [Parabacteroides merdae ATCC
           43184]
          Length = 484

 Score = 66.2 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 66/192 (34%), Gaps = 44/192 (22%)

Query: 263 PRFSSNGKRALISVQK--------------DEAMDIYSVDLQSN---ATERLTNTLFINI 305
           P +  +G+    S+ +              D A D+   D++ +   +   L +    + 
Sbjct: 220 PYWHPSGRYIAFSINRTTQQLHSTQRTEVYDTASDVIVYDVERHTFLSVPGLASQSSFDT 279

Query: 306 SASYSPDSSQIVFES-------DREGK--EQLYVMQSN---GSDQKRISQDKEA-----S 348
             S+SPD   + + +       D  GK    L  +  +   G+   ++    +A     S
Sbjct: 280 FPSFSPDGKSLFYCTAPACLMPDSIGKLAYSLCCISFDPESGTFGSQVDTLFDARANGKS 339

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD----------GSQERLLVEDSNLQAPTWS 398
              P  SP G  +  T      F I     D          GS    L  +      +WS
Sbjct: 340 VSFPRVSPDGRFMLCTLSGYGTFPIWHKDADLYMIDLKSGVGSYPETLNSNDTESYHSWS 399

Query: 399 PSGRSLIFSRKK 410
            +GR ++FS ++
Sbjct: 400 SNGRWVVFSSRR 411



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 72/238 (30%), Gaps = 48/238 (20%)

Query: 195 VMDRDGANIRYLTPSRDQILF---EPRFSPNQQKVAYA---------------TYDDEDI 236
            +  DG  +  L    D+ +     P + P+ + +A++                YD    
Sbjct: 195 TVLVDGDEVELLDTKTDKTISAFTYPYWHPSGRYIAFSINRTTQQLHSTQRTEVYDTASD 254

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEAMDI------Y 285
           + VY ++     +   + +  S    P FS +GK          +  D    +       
Sbjct: 255 VIVYDVERHTFLSVPGLASQSSFDTFPSFSPDGKSLFYCTAPACLMPDSIGKLAYSLCCI 314

Query: 286 SVDLQSN----ATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSN---- 334
           S D +S       + L +      S      SPD   ++      G   ++   ++    
Sbjct: 315 SFDPESGTFGSQVDTLFDARANGKSVSFPRVSPDGRFMLCTLSGYGTFPIWHKDADLYMI 374

Query: 335 ----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDGSQER 384
               G      + +   +     WS  G  + F+    +       I  + KDG   +
Sbjct: 375 DLKSGVGSYPETLNSNDTESYHSWSSNGRWVVFSSRRLDGLYTRPFIAYVGKDGKTGK 432


>gi|325096242|gb|EGC49552.1| WD40 repeat-containing protein [Ajellomyces capsulatus H88]
          Length = 568

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 74/211 (35%), Gaps = 20/211 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +Y+       +   +FSP+   +A  + D      + + DT   R         + I
Sbjct: 209 YREKYVLKGHQLGVSTVKFSPDGSMIASCSAD----ATIKIWDTASGRLIHTFEGHLAGI 264

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIV 317
               +S +G     S   D+++ ++   + +        L +  +I  S ++SP  + +V
Sbjct: 265 STISWSPDGAIIA-SGSDDKSIRLW--HVSTGKPHPNPFLGHHNYI-YSVAFSPKGNMLV 320

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S     E +Y+     +   R                 G LI      G    I +  
Sbjct: 321 SGSY---DEAVYLWDVRSARVMRSLPAHSDPVAGVDIVRDGTLIVSCASDG---LIRIWD 374

Query: 378 KDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
               Q  R LV + N  + A  +SP+G+ ++
Sbjct: 375 TGTGQCLRTLVHEDNPPVSAVKFSPNGKYVL 405



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 55/179 (30%), Gaps = 12/179 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR-AP 250
           ++ + D     + +        +    +SP+   +A  + D      + L      +  P
Sbjct: 242 TIKIWDTASGRLIHTFEGHLAGISTISWSPDGAIIASGSDDK----SIRLWHVSTGKPHP 297

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                  + I +  FS  G   + S   DEA+ ++ V   +     L             
Sbjct: 298 NPFLGHHNYIYSVAFSPKGNMLV-SGSYDEAVYLWDV-RSARVMRSLPAHSDPVAGVDIV 355

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLI-AFTKFS 367
            D + IV  +       + +  +      R +  +         +SP G  + A+T   
Sbjct: 356 RDGTLIVSCAS---DGLIRIWDTGTGQCLRTLVHEDNPPVSAVKFSPNGKYVLAWTHDD 411



 Score = 36.9 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 54/167 (32%), Gaps = 29/167 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G +I  G D   +  RLW V   K          P     + H   + IY      KG  
Sbjct: 273 GAIIASGSDDKSI--RLWHVSTGK----------PHPNPFLGHH--NYIYSVAFSPKG-- 316

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     +VSG    ++ + D   A +    P+    +       +   +     D 
Sbjct: 317 --------NMLVSGSYDEAVYLWDVRSARVMRSLPAHSDPVAGVDIVRDGTLIVSCASDG 368

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKD 279
                + + DT   +  + + +  +  + A +FS NGK  L     D
Sbjct: 369 ----LIRIWDTGTGQCLRTLVHEDNPPVSAVKFSPNGKYVLAWTHDD 411


>gi|116622435|ref|YP_824591.1| hypothetical protein Acid_3333 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225597|gb|ABJ84306.1| hypothetical protein Acid_3333 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 342

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 65/174 (37%), Gaps = 10/174 (5%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDS 313
           N  +  L   F    +    +  +     ++ V L +    RLT    I+  SA+  PD 
Sbjct: 12  NHPTYFLQSSFFPGDREMFFTSYRTGDAQLFEVSLVTGDQRRLTWGSPIHPYSAALHPDG 71

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +V    R G  +L+ +     +++ I Q   A   +   S  G+ +     +     +
Sbjct: 72  HTLVVT--RGG--ELWAVDRLVENERMIFQFPGAQLGECSISADGEWLTAAFANLGARGL 127

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSG-RSLIFSRKKDGDTGSKLYSIDLNGR 426
            V + D  + R++     +  P + P     + FS    GD   +++ +  +G 
Sbjct: 128 VVSRFDAKESRIIPFPRTVIHPQFHPLEPEWIEFS----GDPAPRMHRVRRDGT 177



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 61/166 (36%), Gaps = 20/166 (12%)

Query: 294 TERLTNTLFIN-----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             ++T+   IN     + +S+ P   ++ F S R G  QL+ +     DQ+R++      
Sbjct: 2   IRQVTDGECINHPTYFLQSSFFPGDREMFFTSYRTGDAQLFEVSLVTGDQRRLTWGSPIH 61

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIF 406
            +     P G  +  T+       +  + +    ER++ +   + L   + S  G  L  
Sbjct: 62  PYSAALHPDGHTLVVTR----GGELWAVDRLVENERMIFQFPGAQLGECSISADGEWLTA 117

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-------WVGF 445
           +    G  G  L     + +   +I  P     PQ       W+ F
Sbjct: 118 AFANLGARG--LVVSRFDAKESRIIPFPRTVIHPQFHPLEPEWIEF 161


>gi|329930463|ref|ZP_08284003.1| peptidase, S9A/B/C family, catalytic domain protein [Paenibacillus
           sp. HGF5]
 gi|328934841|gb|EGG31331.1| peptidase, S9A/B/C family, catalytic domain protein [Paenibacillus
           sp. HGF5]
          Length = 598

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 62/158 (39%), Gaps = 10/158 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFINISASYSPDSSQI--VFESD 321
           S++  R + S   +   ++++++L+   +    LT    I       P+   I   F+ D
Sbjct: 24  SADESRLVFSSSLNGKFNLWAMELEGETSYPYPLTYNDQIASFIKLDPEGRHILTAFDRD 83

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFSGEKFAI--GVMK 377
                Q + ++ NG +   + +  +A   ++    S  G  + +    G    +   V  
Sbjct: 84  GNENYQFHALRWNGGEPMPLFEGADAEDKHYFVHLSEDGKRLYYVTSKGNPSYLNSRVYH 143

Query: 378 KDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGD 413
            D  ++ LL E   ++ +    SP  +++ +++     
Sbjct: 144 LDTKEDHLLHEGEATSTEMCAVSPDEKTIAYTKMYANT 181



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/208 (11%), Positives = 64/208 (30%), Gaps = 14/208 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S ++ ++ +++  +       +        P  +     +    +    G+  L +  +
Sbjct: 23  ISADESRLVFSSSLNGKFNLWAMELEGETSYPYPLTYNDQIASFIKLDPEGRHILTAFDR 82

Query: 279 DE--AMDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFESDREGKEQLY--VM 331
           D       +++         L           +   S D  ++ + + +     L   V 
Sbjct: 83  DGNENYQFHALRWNGGEPMPLFEGADAEDKHYFVHLSEDGKRLYYVTSKGNPSYLNSRVY 142

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             +  +   + + +  S      SP    IA+TK     + +  +K++G +   L     
Sbjct: 143 HLDTKEDHLLHEGEATSTEMCAVSPDEKTIAYTKMYANTYYVSYVKREGEEPLCLTPTP- 201

Query: 392 LQAPTWSPS-----GRSLIFSRKKDGDT 414
            +    S          +IF+   + + 
Sbjct: 202 -EQVHISGDVLFVSNDQVIFATDYESEF 228



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 84/289 (29%), Gaps = 43/289 (14%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           SR++F S    S   K +L  M+ +G     Y     DQI    +  P  + +  A   D
Sbjct: 28  SRLVFSS----SLNGKFNLWAMELEGETSYPYPLTYNDQIASFIKLDPEGRHILTAFDRD 83

Query: 234 EDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVD 288
            +    +         P  +    +          S +GKR      K     +      
Sbjct: 84  GNENYQFHALRWNGGEPMPLFEGADAEDKHYFVHLSEDGKRLYYVTSKGNPSYLNSRVYH 143

Query: 289 LQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           L +     L      +    + SPD   I +         +  ++  G +   ++   E 
Sbjct: 144 LDTKEDHLLHEGEATSTEMCAVSPDEKTIAYTKMYANTYYVSYVKREGEEPLCLTPTPE- 202

Query: 348 SYFDPVWSPQ-----GDLIAFTKFSGEKFAIG------------VMKKDGSQERLLVEDS 390
                  S        D + F      +F+              + + D    +LL    
Sbjct: 203 ---QVHISGDVLFVSNDQVIFATDYESEFSYVARYDIPQQKFEPLCRIDRESIQLL---- 255

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                 +    R+L    +K      +LY+  L+    T I  P+   +
Sbjct: 256 -----RFHKDSRTLYIVTEKG--VEDRLYAYSLDSGELTAIPLPSDIVE 297



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 3/89 (3%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS---PSGRSLIFSRKK 410
            S     + F+     KF +  M+ +G          N Q  ++    P GR ++ +  +
Sbjct: 23  ISADESRLVFSSSLNGKFNLWAMELEGETSYPYPLTYNDQIASFIKLDPEGRHILTAFDR 82

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASD 439
           DG+   + +++  NG     +   A A D
Sbjct: 83  DGNENYQFHALRWNGGEPMPLFEGADAED 111


>gi|313886077|ref|ZP_07819815.1| peptidase, S9A/B/C family, catalytic domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312924607|gb|EFR35378.1| peptidase, S9A/B/C family, catalytic domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 738

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 64/368 (17%), Positives = 126/368 (34%), Gaps = 65/368 (17%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             L DV ++KQI+G  +F++    ++ +    ++   ++  E+G   + +++  +   S 
Sbjct: 130 LYLIDV-EQKQIVG--YFATGKIEKRASLLSPNERNLAVKSEEG---TLLIYTIQPAGSA 183

Query: 188 IIKNSLCVMD------RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
                L   D        G ++       D  LF   +SP+ +++A+   D   +    +
Sbjct: 184 PQAPMLVATDEAEAAVVYGESVHQNEFGIDGGLF---WSPDSRQLAFYRMDQSMVAPYPI 240

Query: 242 MDTRIDRAPKRIGNFRSMILAP--------------------------------RFSSNG 269
           +D    +A  +   +  M   P                                 +  N 
Sbjct: 241 VDMTPHKAVVQPVRYP-MAGTPSHHVTLGVFHVESQQTTYLATGGDPEHYLTNVAWHPNS 299

Query: 270 KRALISVQKDEAMDIYS--VDLQSNA--TERLTNTLFINISAS----YSPD--SSQIVFE 319
           K+  I+        ++    D Q+ A        T    +       + P     Q V+E
Sbjct: 300 KKVYIAELNRGQDHLFLNGYDAQTGAHVETLFEETDAHYVEPQRPMMFVPGSRGEQFVWE 359

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMK 377
           S REG  QLY+  S G   ++++  +        + P+G+ I +     S  +  I    
Sbjct: 360 SRREGYRQLYLYSSTGKLIRKLTDMEGEVTDIYGFDPKGERIYYQAAYPSPLERHIFASD 419

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               +   L + +      +SP  +     + +       +   D NG    LI+    A
Sbjct: 420 LKRGRTIQLSKVAGTHDAIFSPD-KQYYIDQLQSATIARSVMLHDNNGLQLRLIH---QA 475

Query: 438 SDPQWVGF 445
            DP WV F
Sbjct: 476 PDP-WVKF 482


>gi|308051378|ref|YP_003914944.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ferrimonas balearica DSM 9799]
 gi|307633568|gb|ADN77870.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ferrimonas balearica DSM 9799]
          Length = 684

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/288 (14%), Positives = 88/288 (30%), Gaps = 60/288 (20%)

Query: 204 RYLTPSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTR----IDRAPKRIGNF 256
             +TP     +  P     S + ++ A+     +        D       D  P+R+   
Sbjct: 26  HQITPEDYFTIAHPSGVALSADAKQAAWVQSYWDKESDGQKRDLWRMALPDGTPERLTFS 85

Query: 257 RSMILAPRFSSNGKRALI--SVQK--------DEAMDIYSVDLQSNATERLTNTLFINIS 306
            +   AP+FS++G+      + Q+        +    ++ + L +     +T        
Sbjct: 86  EANEGAPQFSADGRYLFFLKAEQRGEDAKAPYNGKSQVWRLSLANGDVVPVTREKAGVSQ 145

Query: 307 ASYSPDSSQIVFESDREGKEQ------------------------LYVMQSNGSDQKRIS 342
            +  P    + F  ++  +                          LY +       + + 
Sbjct: 146 FALGPQGQALWFTGNKTHRNSDPFAALRSTHSAPQYGHGEVTVNPLYRLDLTSYRTELVL 205

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKF-------AIGVMKKDGSQERLLVED------ 389
            D +  +     SP G+ IA       +         I +  +  ++   L +       
Sbjct: 206 DDNKVVWGF-DISPDGNRIARVITDDNELVHLEGWSDIAIYDRQQNRGWTLPDQAWRADA 264

Query: 390 ----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                 L  P WSP G  L F    DG  G +L+  +L+   + +  T
Sbjct: 265 PSPYGWLMQPRWSPDGERLAFRIDYDGYPG-QLFVTELDSAGDVIRQT 311



 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 85/256 (33%), Gaps = 37/256 (14%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-------- 233
           +     +  N L  +D        +    +++++    SP+  ++A    DD        
Sbjct: 180 QYGHGEVTVNPLYRLDLTSYRTELVLDD-NKVVWGFDISPDGNRIARVITDDNELVHLEG 238

Query: 234 -EDILRVYLMDTRIDRAPKRIG-----NFRSMILAPRFSSNGKRALISVQKDEAM-DIYS 286
             DI        R    P +       +    ++ PR+S +G+R    +  D     ++ 
Sbjct: 239 WSDIAIYDRQQNRGWTLPDQAWRADAPSPYGWLMQPRWSPDGERLAFRIDYDGYPGQLFV 298

Query: 287 VDLQS-------NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ- 338
            +L S           R  +      + ++ P+S +I +      + +LY    +G++Q 
Sbjct: 299 TELDSAGDVIRQTDLRRPGDVTLNGDNIAWRPNSDEICYRGSEHARVRLYCTDMDGAEQG 358

Query: 339 -KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             RI  + +       +S +G  +  T    + F      + G   +    D N Q   W
Sbjct: 359 DTRILTEGDFVVGGYAFSAKGRDLVLTHNGLDHFYEVYSGRVGKTPQQRT-DINPQVARW 417

Query: 398 -----------SPSGR 402
                      +P G 
Sbjct: 418 QLPQLSIVRWTAPDGS 433



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 74/240 (30%), Gaps = 57/240 (23%)

Query: 261 LAPRFSSNGKRALIS------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                S++ K+A             +  D++ + L     ERLT +     +  +S D  
Sbjct: 40  SGVALSADAKQAAWVQSYWDKESDGQKRDLWRMALPDGTPERLTFSEANEGAPQFSADGR 99

Query: 315 QIVF--ESDRE--------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF- 363
            + F     R         GK Q++ +     D   ++++K A        PQG  + F 
Sbjct: 100 YLFFLKAEQRGEDAKAPYNGKSQVWRLSLANGDVVPVTREK-AGVSQFALGPQGQALWFT 158

Query: 364 ---TKFSGEKFA--------------------IGVMKKDGSQERLLVEDSN-LQAPTWSP 399
              T  + + FA                    +  +     +  L+++D+  +     SP
Sbjct: 159 GNKTHRNSDPFAALRSTHSAPQYGHGEVTVNPLYRLDLTSYRTELVLDDNKVVWGFDISP 218

Query: 400 SGRSLIFSRKKDGDTG-----SKLYSIDL-NGRNETLINTP---------AYASDPQWVG 444
            G  +      D +       S +   D    R  TL +            +   P+W  
Sbjct: 219 DGNRIARVITDDNELVHLEGWSDIAIYDRQQNRGWTLPDQAWRADAPSPYGWLMQPRWSP 278


>gi|145510074|ref|XP_001440971.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124408208|emb|CAK73574.1| unnamed protein product [Paramecium tetraurelia]
          Length = 647

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 62/373 (16%), Positives = 116/373 (31%), Gaps = 65/373 (17%)

Query: 66  SEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ-DWNSLGAQ--VLVTG------RV 116
           + ++  DL  S  F  I          N +    F   W ++G    +++ G      +V
Sbjct: 162 ANLIRCDLSGS-EFENIIISGM-----NLNQAKLFNCKWRNIGIDEEIMLYGHGDQVNKV 215

Query: 117 IKEGKDRLRVEF------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
                 +           +LWD K  K    K F    +  + ++ + +     S     
Sbjct: 216 CFSPNGKSLASCSSDNSIKLWDFKTGKI---KSFLFGESELKSVSFSQNSTTLASC---S 269

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F         ++ +G   + L                   I+    FSPN   +A  +
Sbjct: 270 GTF-----VYLRNLKTGKQISKLI--------------GHIDIINSVCFSPNGTTLASGS 310

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D+     + L D +      R+      ILA  FS +G     S   D ++ +++V   
Sbjct: 311 DDN----CIRLWDVKRGEQKARLDGHSDGILAVCFSHDGNTLA-SGSNDNSICLWNVKTA 365

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
               E L        +  +SPD + +   S     + + +            +  E S  
Sbjct: 366 QKMLE-LEGHEDCVNTVCFSPDGTTLASGSY---DKSIRLWDVKTGQLILKFKGLEDSVN 421

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSR 408
              +SP G  +          +I +      Q++  +E       +  +SP G +L    
Sbjct: 422 TVCFSPDGTTL---TSGSSDHSIRLWDVKTGQQKFELEGHEDCINSVCFSPDGTTLA--- 475

Query: 409 KKDGDTGSKLYSI 421
              G     +Y  
Sbjct: 476 --SGSYDKSIYVY 486



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 74/223 (33%), Gaps = 25/223 (11%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D I        G           ++ SG   N + + D      +         +    F
Sbjct: 292 DIINSVCFSPNG----------TTLASGSDDNCIRLWDVKRGEQKARLDGHSDGILAVCF 341

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +   +A  + D+     + L + +  +    +      +    FS +G     S   D
Sbjct: 342 SHDGNTLASGSNDN----SICLWNVKTAQKMLELEGHEDCVNTVCFSPDGTTLA-SGSYD 396

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +++ ++  D+++     +     +  S +   +SPD + +   S       + +      
Sbjct: 397 KSIRLW--DVKTGQL--ILKFKGLEDSVNTVCFSPDGTTL--TSGSSDHS-IRLWDVKTG 449

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            QK   +  E       +SP G  +A   +    +  G++++D
Sbjct: 450 QQKFELEGHEDCINSVCFSPDGTTLASGSYDKSIYVYGMLRQD 492



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 41/136 (30%), Gaps = 27/136 (19%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  + I+  KF               D +        G     
Sbjct: 388 TTLASGSYDKSIRLWDVKTGQLIL--KFKGLE-----------DSVNTVCFSPDG----- 429

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG   +S+ + D      ++     +  +    FSP+   +A  +YD    
Sbjct: 430 -----TTLTSGSSDHSIRLWDVKTGQQKFELEGHEDCINSVCFSPDGTTLASGSYDK--- 481

Query: 237 LRVYLMDTRIDRAPKR 252
             +Y+         K+
Sbjct: 482 -SIYVYGMLRQDYKKQ 496


>gi|258510892|ref|YP_003184326.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257477618|gb|ACV57937.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 600

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 60/182 (32%), Gaps = 8/182 (4%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ--IV 317
           I     S +  R  ++       D + +DL      RLTN   +  +  + P      + 
Sbjct: 18  IFGLAVSKDETRIAVATNFSGRYDAWGMDLDCPFPYRLTNEGQVPHAMHFDPQGRYVLVA 77

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI--GV 375
           F+ D +   QLY++   G ++  +   +   +     S  G+ I ++        +   V
Sbjct: 78  FDHDGDENAQLYLIPPRGGEKHPLRTHEGRRFMFCTTSKDGNRIYYSSDKDNPTYLCGYV 137

Query: 376 MKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              +  +ER L   ED        S    S  +          ++  +   G   +L   
Sbjct: 138 FDLESGEERTLYEGEDGPTVLVAVSDDESS--WVTATAFANTYQIAHLHRAGERVSLTPD 195

Query: 434 PA 435
           P 
Sbjct: 196 PG 197



 Score = 65.8 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 85/244 (34%), Gaps = 23/244 (9%)

Query: 203 IRYLTPSRDQILFEPRF-----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           ++   P+ +Q+   P       S ++ ++A AT         + MD      P R+ N  
Sbjct: 2   LQLPRPNPEQLFHTPTIFGLAVSKDETRIAVATNFSGR-YDAWGMDLDC-PFPYRLTNEG 59

Query: 258 SMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSS 314
            +  A  F   G+  L++   D      +Y +  +      L        +  + S D +
Sbjct: 60  QVPHAMHFDPQGRYVLVAFDHDGDENAQLYLIPPRGGEKHPLRTHEGRRFMFCTTSKDGN 119

Query: 315 QIVFESDREGKEQL--YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +I + SD++    L  YV      +++ + + ++        S               + 
Sbjct: 120 RIYYSSDKDNPTYLCGYVFDLESGEERTLYEGEDGPTVLVAVSDDESSWVTATAFANTYQ 179

Query: 373 IGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GR 426
           I  + + G +  L  +      + +  ++  G  ++F+     D   +LY    +   G 
Sbjct: 180 IAHLHRAGERVSLTPDPGTPHIVDSVEFA--GHLVVFATDYQAD---ELYLASFDPQTGS 234

Query: 427 NETL 430
            + +
Sbjct: 235 FQRI 238



 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 54/150 (36%), Gaps = 6/150 (4%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             E+L +T  I    + S D ++I   ++  G+   + M  +     R++ + +  +   
Sbjct: 8   NPEQLFHTPTI-FGLAVSKDETRIAVATNFSGRYDAWGMDLDCPFPYRLTNEGQVPHAM- 65

Query: 353 VWSPQGDLI--AFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSR 408
            + PQG  +  AF     E   + ++   G ++      E       T S  G  + +S 
Sbjct: 66  HFDPQGRYVLVAFDHDGDENAQLYLIPPRGGEKHPLRTHEGRRFMFCTTSKDGNRIYYSS 125

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            KD  T    Y  DL    E  +       
Sbjct: 126 DKDNPTYLCGYVFDLESGEERTLYEGEDGP 155



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 73/262 (27%), Gaps = 13/262 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMDT 244
            G     L ++   G     L     +       S +  ++ Y++  D+   L  Y+ D 
Sbjct: 81  DGDENAQLYLIPPRGGEKHPLRTHEGRRFMFCTTSKDGNRIYYSSDKDNPTYLCGYVFDL 140

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-- 302
                           +    S +    + +        I  +         LT      
Sbjct: 141 ESGEERTLYEGEDGPTVLVAVSDDESSWVTATAFANTYQIAHLHRA-GERVSLTPDPGTP 199

Query: 303 -INISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            I  S  ++     +VF +D +  ++LY+          +RI   ++ S        +  
Sbjct: 200 HIVDSVEFA--GHLVVFATDYQ-ADELYLASFDPQTGSFQRIWAPEKGSVTHVAVHKESQ 256

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                   G    +  +         L     +           L      D + G  ++
Sbjct: 257 TAYVAVMRGVIDELYRVDLRTGSAEKLSAPCEVMGQVKVGDSGRLYLLGASDNEPG-NVW 315

Query: 420 SIDLNG--RNETLINTPAYASD 439
            +DL+G  R  T +    ++ D
Sbjct: 316 MLDLDGTWRPLTRVRPMGFSPD 337


>gi|154493900|ref|ZP_02033220.1| hypothetical protein PARMER_03244 [Parabacteroides merdae ATCC
           43184]
 gi|154086160|gb|EDN85205.1| hypothetical protein PARMER_03244 [Parabacteroides merdae ATCC
           43184]
          Length = 822

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 100/307 (32%), Gaps = 46/307 (14%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           ++    K  F +    V  +      + +L  +  DG  IR +             SPN 
Sbjct: 149 ETNHIPKVTFKTDSKAVVTATTDPEKRYTLSDV-FDGTRIRSV-----------SLSPNG 196

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +  A                 DRA  ++    S      +     R   + +  +  +
Sbjct: 197 KYLLTAYQTTYPGGDTESFQQVTDRATGQVL-MESNNHHYSWMPRSNRLYYTRKGMQGKE 255

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG------------------- 324
           + ++D  + A E L + L  +   S++P    ++F    EG                   
Sbjct: 256 LVTIDPATQAEEVLAHNL-PDGWFSFAPTEDFLLFNIIEEGPKKGEDLQEILVPDDRQPG 314

Query: 325 ---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFA---IG 374
              +  ++         +R++    ++  +   S  G  + FT    + +   F+   + 
Sbjct: 315 WRTRSFIHKYDLATGVFQRLTYGHTSTSIN-DISDDGRYLLFTCSERELTKRPFSTTLLY 373

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            M        LL++D  +    +SP G+ L  +    G+  +K+      G+   + +  
Sbjct: 374 RMDLQTLDTELLLKDPFISYAQFSPDGKMLAIAAS--GEAFNKIGLKIAPGQTSNMADGQ 431

Query: 435 AYASDPQ 441
            +  DP 
Sbjct: 432 LFLYDPA 438



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 56/169 (33%), Gaps = 28/169 (16%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQS 291
           ++  D       +R+    +       S +G+  L +  + E          +Y +DLQ+
Sbjct: 321 IHKYDLATGVF-QRLTYGHTSTSINDISDDGRYLLFTCSERELTKRPFSTTLLYRMDLQT 379

Query: 292 NATERLTNTLFINISASYSPDSSQIV-------F-----------ESDREGKEQLYVMQS 333
             TE L    FI+  A +SPD   +        F            S+     QL++   
Sbjct: 380 LDTELLLKDPFISY-AQFSPDGKMLAIAASGEAFNKIGLKIAPGQTSNMA-DGQLFLYDP 437

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                  +++D   S  + VW+     I       +   + V+     +
Sbjct: 438 ASKQANPVTKDFNPSVQNFVWNKGDKQIYLQGEDKDCVRLYVLNPSTGK 486



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 59/175 (33%), Gaps = 23/175 (13%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--VFESDREGKEQ 327
            +A+++   D        D+      R         S S SP+   +   +++   G + 
Sbjct: 162 SKAVVTATTDPEKRYTLSDVFDGTRIR---------SVSLSPNGKYLLTAYQTTYPGGDT 212

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
               Q       ++    E++     W P+ + + +T+   +   +  +      E +L 
Sbjct: 213 ESFQQVTDRATGQVLM--ESNNHHYSWMPRSNRLYYTRKGMQGKELVTIDPATQAEEVLA 270

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +      +++P+   L+F+  ++G            G +   I  P     P W
Sbjct: 271 HNLPDGWFSFAPTEDFLLFNIIEEGPKK---------GEDLQEILVP-DDRQPGW 315


>gi|209523207|ref|ZP_03271763.1| WD-40 repeat protein [Arthrospira maxima CS-328]
 gi|209496358|gb|EDZ96657.1| WD-40 repeat protein [Arthrospira maxima CS-328]
          Length = 1167

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 85/240 (35%), Gaps = 17/240 (7%)

Query: 177  ILFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            I+F + S V     +   +   D   N           + +  FSPN + +A +++D   
Sbjct: 856  IVFNATSGVMASASSDQTIKLWDFMGNPLATLTGHITRVNQLAFSPNGKWLASSSHDG-- 913

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
               V L +   +   + + + ++ +   +F+ + ++ + +   D  + ++  D   +  +
Sbjct: 914  --SVKLWNLASNSVHRTLTDHQASVWGLQFTPDSQKLV-TASWDNTLKMW--DEYGDIVQ 968

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                 +          D   +V  S       + +   +G    R++  ++  +   ++S
Sbjct: 969  VFRGHIGAVWGVDIRSDGEMMVSSSH---DNSVKLWGLDGRYHSRLNSHQDGVWSV-LFS 1024

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQ---ERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
            P GDLIA +        + +           + L      +    +S +G+ L  +    
Sbjct: 1025 PDGDLIA-SGSRDRTVKLWLWNPTTQTYNLYQTLSGHQGTVVQVAFSNNGQYLASASDDQ 1083



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 79/230 (34%), Gaps = 15/230 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS     ++ + +  G  IR    S D  +++  FSP+ + +A  + D    L       
Sbjct: 738 VSASRDRTIKITNTQGE-IRQSIESHDDEVWDIAFSPDGKLIASGSRDQTVRLWKKSPID 796

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           ++    +        + A  FS + +  + S   D  + ++ +D        +TN     
Sbjct: 797 QLYYPREVFRGHEGEVDAVSFSPDSQTLV-SGSWDRTLRLWKIDH-----PLMTNFQAHE 850

Query: 305 IS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  ++  S  +   S     + + +    G+    ++           +SP G  +
Sbjct: 851 GEIWDIVFNATSGVMASASS---DQTIKLWDFMGNPLATLT-GHITRVNQLAFSPNGKWL 906

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           A +   G    +  +  +     L    +++    ++P  + L+ +   +
Sbjct: 907 ASSSHDGSV-KLWNLASNSVHRTLTDHQASVWGLQFTPDSQKLVTASWDN 955



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 78/210 (37%), Gaps = 25/210 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  ++   FSP+ + +A  +   +  ++++  D  +      I +F    +A  FS
Sbjct: 551 FSGHRGSIYNISFSPDGRLIA--SVGQDKTVKLWQPDGELLAN---ISSFEDETIAINFS 605

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI------SASYSPDSSQIVFES 320
            +     + V +D  + +++V          T     N       S  +S D   I   S
Sbjct: 606 PDNHLIAVGV-RDGNVQVWNV-----KQTPPTLEYSWNAHQQPVMSVVFSFDGELIASVS 659

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G  +L+ +   G     +S D         +SP G++IA     GE   I +   DG
Sbjct: 660 L-DGSAKLWKIN--GELLTTLSNDG-IPRRAIAYSPNGEMIA---LGGESGIIELFNSDG 712

Query: 381 SQER-LLVEDSNLQAPTWSPSGRSLIFSRK 409
           S  + L      + A  +SP    L+ + +
Sbjct: 713 SLLKSLPNHQREVMAIAFSPDSDHLVSASR 742



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 98/257 (38%), Gaps = 25/257 (9%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     + + + DG+ ++ L P+  + +    FSP+   +  A+ D     R   +    
Sbjct: 699 GGESGIIELFNSDGSLLKSL-PNHQREVMAIAFSPDSDHLVSASRD-----RTIKITNTQ 752

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS---VDLQSNATERLTNTLFI 303
               + I +    +    FS +GK    S  +D+ + ++    +D      E        
Sbjct: 753 GEIRQSIESHDDEVWDIAFSPDGKLIA-SGSRDQTVRLWKKSPIDQLYYPREVFRGHEGE 811

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLI 361
             + S+SPDS  +V  S  +   +L+ +         ++  Q  E   +D V++    ++
Sbjct: 812 VDAVSFSPDSQTLVSGS-WDRTLRLWKID-----HPLMTNFQAHEGEIWDIVFNATSGVM 865

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           A          I +    G+    L    + +    +SP+G+ L  S   DG    KL++
Sbjct: 866 ASASSDQT---IKLWDFMGNPLATLTGHITRVNQLAFSPNGKWLA-SSSHDGSV--KLWN 919

Query: 421 IDLNGRNETLINTPAYA 437
           +  N  + TL +  A  
Sbjct: 920 LASNSVHRTLTDHQASV 936



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 65/175 (37%), Gaps = 14/175 (8%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            +  V        +   R    R  I    FS +G+    SV +D+ + ++  D      
Sbjct: 533 KVESVLSQTAYSIQEFNRFSGHRGSIYNISFSPDGRLIA-SVGQDKTVKLWQPD--GELL 589

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             +++     I+ ++SPD+  I     R+G  Q++ ++      +      +      V+
Sbjct: 590 ANISSFEDETIAINFSPDNHLIA-VGVRDGNVQVWNVKQTPPTLEYSWNAHQQPVMSVVF 648

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI 405
           S  G+LIA     G    +  +  +     LL   SN   P     +SP+G  + 
Sbjct: 649 SFDGELIASVSLDGSA-KLWKINGE-----LLTTLSNDGIPRRAIAYSPNGEMIA 697



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 58/150 (38%), Gaps = 7/150 (4%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VS    NS+ +   DG        S    ++   FSP+   +A  + D    L ++   T
Sbjct: 990  VSSSHDNSVKLWGLDG-RYHSRLNSHQDGVWSVLFSPDGDLIASGSRDRTVKLWLWNPTT 1048

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +     + +   +  ++   FS+NG+    S   D+ + ++S     ++   L     + 
Sbjct: 1049 QTYNLYQTLSGHQGTVVQVAFSNNGQYLA-SASDDQTVRVWS--RYGDSLVHLGGNCGMV 1105

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             +  +SPD   +    +  G   + + Q +
Sbjct: 1106 RTVEFSPDDQILA---NGGGNGTITLWQID 1132


>gi|322693123|gb|EFY84996.1| Heterokaryon incompatibility protein [Metarhizium acridum CQMa 102]
          Length = 1454

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 79/227 (34%), Gaps = 39/227 (17%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ + +A      +   +V + D + +  PK +      +    FS +G     S  
Sbjct: 1119 AFSPDSKYIA---TGTDRDYKVCVWDWKSEAPPKVLSGHTDRVTTVSFSPDGSFLA-SGS 1174

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQS 333
             D    I+                  ++      S+SP  + +   S R     ++   S
Sbjct: 1175 WDRTTRIWREP--------------WDVEHINGLSFSPSETCVATCS-RNETTCIWHYDS 1219

Query: 334  NGSDQKR----ISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGS--QE 383
                Q +    + +D+ A Y  P+     S  G  +A     G    I +   +    Q 
Sbjct: 1220 QDEAQVQSEVGVRRDQNAPYTWPITSITISEDGKWVASASMDG---LICLWDGNSGLLQR 1276

Query: 384  RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            R+      +Q+  ++   R LI +     D   +++ +D N ++  L
Sbjct: 1277 RICEHRKEVQSLAFAHDSRKLISASD---DQTVRIWGVDRNSKSRVL 1320



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 79/274 (28%), Gaps = 63/274 (22%)

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD--------------- 233
                +CV D        +       +    FSP+   +A  ++D                
Sbjct: 1133 RDYKVCVWDWKSEAPPKVLSGHTDRVTTVSFSPDGSFLASGSWDRTTRIWREPWDVEHIN 1192

Query: 234  ----------------EDILRVYLMDTRIDRAPKRIGNFRSMILAP--------RFSSNG 269
                             +   ++  D++ +   +     R    AP          S +G
Sbjct: 1193 GLSFSPSETCVATCSRNETTCIWHYDSQDEAQVQSEVGVRRDQNAPYTWPITSITISEDG 1252

Query: 270  KRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            K    S   D  + ++  D  S     R+        S +++ DS +++  SD    + +
Sbjct: 1253 KWVA-SASMDGLICLW--DGNSGLLQRRICEHRKEVQSLAFAHDSRKLISASD---DQTV 1306

Query: 329  YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDG------ 380
             +   + + + R+    +        S  G L+A          + I   K  G      
Sbjct: 1307 RIWGVDRNSKSRVLYGHKNRVRCAALSRNGRLVASGSDDRIVRVWNITQSKVAGAKSGQE 1366

Query: 381  ---------SQERLLVEDSNLQAPTWSPSGRSLI 405
                         L   ++ +    +SP G+ ++
Sbjct: 1367 EEGKERNMQGARVLRGHEAFIMGVLFSPDGKYVV 1400


>gi|20806839|ref|NP_622010.1| periplasmic component of the Tol biopolymer transport system
           [Thermoanaerobacter tengcongensis MB4]
 gi|20515306|gb|AAM23614.1| Periplasmic component of the Tol biopolymer transport system
           [Thermoanaerobacter tengcongensis MB4]
          Length = 645

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 72/191 (37%), Gaps = 29/191 (15%)

Query: 266 SSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESD 321
           S +G + + + +  D    IY  DL++    ++  +   +       +SPD +++++   
Sbjct: 131 SPDGTKLVFTTRTSDGKNAIYIKDLKTGKETKIIESKDRDTYYSDPGFSPDGNKVIYTEQ 190

Query: 322 -----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                     ++     N  D K +   K A      +    D I F +   +   I   
Sbjct: 191 IIVPRETHGFEVKESNINAIDLKSLKVTKLADGSCGSFVKTEDAIVFER---DNKIIYKN 247

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD----------TGSKLYSIDL--- 423
            KDGS E+++ E  N   P+ SP+G  + + + +             + + ++  D    
Sbjct: 248 LKDGS-EKIIDEGKN---PSVSPNGYYIAYEKYEPKKEKVEDMNVTVSMNNIWIADAASF 303

Query: 424 NGRNETLINTP 434
             + +  +N P
Sbjct: 304 TTKKQVTLNVP 314



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 74/233 (31%), Gaps = 60/233 (25%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISV 276
            SP+  K+ + T   +    +Y+ D +  +  K I +         P FS +G + + + 
Sbjct: 130 ISPDGTKLVFTTRTSDGKNAIYIKDLKTGKETKIIESKDRDTYYSDPGFSPDGNKVIYTE 189

Query: 277 Q----------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           Q          + +  +I ++DL+S    +L +        S+      IVFE D     
Sbjct: 190 QIIVPRETHGFEVKESNINAIDLKSLKVTKLADGSC----GSFVKTEDAIVFERD----N 241

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------------FAIG 374
           ++         +K I + K      P  SP G  IA+ K+  +K              I 
Sbjct: 242 KIIYKNLKDGSEKIIDEGKN-----PSVSPNGYYIAYEKYEPKKEKVEDMNVTVSMNNIW 296

Query: 375 VMKKDGSQER-----------------------LLVEDSNLQAPTWSPSGRSL 404
           +        +                       +         P WS   +S+
Sbjct: 297 IADAASFTTKKQVTLNVPKRIPPEVLKEKIQNYVTSSLYTYYWPVWSSDSKSI 349



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 5/61 (8%)

Query: 354 WSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSR 408
            SP G  + FT + S  K AI +      +E  ++E    D+    P +SP G  +I++ 
Sbjct: 130 ISPDGTKLVFTTRTSDGKNAIYIKDLKTGKETKIIESKDRDTYYSDPGFSPDGNKVIYTE 189

Query: 409 K 409
           +
Sbjct: 190 Q 190


>gi|308068215|ref|YP_003869820.1| hypothetical protein PPE_01443 [Paenibacillus polymyxa E681]
 gi|305857494|gb|ADM69282.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 393

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 54/298 (18%), Positives = 99/298 (33%), Gaps = 21/298 (7%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            ++D++  S     GD  +R     E ++    K  L + + +    R LTP R      
Sbjct: 78  QVTDELVVSSIDRLGDVYARSWLSDEELI-VERKTKLWIHNVETDKERILTPGRKAPQLL 136

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              SP+Q+ V +          +      +            M +   +S      LI+ 
Sbjct: 137 AVVSPDQRHVFFTEGSTSSKYDIQGYILELSSGKVTPIGKLDMTIEVSWSDEND--LITG 194

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP---DSSQIVFE-SDREGKEQLYVMQ 332
             D  + +  +D ++       +    N S   S      + I +  SD++G   L    
Sbjct: 195 TPDGKIQLIGLDGKAKEL----SFQDPNRSELMSHVEKVGNAIFYTGSDKQGYPVLNRFT 250

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---KKDGSQERLLVED 389
                   I++           SP G  IA  K          M    + G ++ ++ + 
Sbjct: 251 LTHPQAVTIAEG----AMSFAVSPDGKSIAIEKRKWNTSEPARMIILDEQGKEKGIVGQG 306

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSIDLNGRNETLINTPAYASD-PQ-WVG 444
           + +   +WS  G  L +S   +   G + LY  D +    T + T   + D P  W  
Sbjct: 307 TLMSRGSWSSDGSKLAYSIYDEDQQGMRGLYVFDQSTGKTTPVTTDIQSYDSPTVWSP 364



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 61/184 (33%), Gaps = 11/184 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + ++  DG          ++             + Y   D +    +      
Sbjct: 193 TGTPDGKIQLIGLDGKAKELSFQDPNRSELMSHVEKVGNAIFYTGSDKQGYPVLNRFTLT 252

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTNTLF 302
               P+ +       ++   S +GK   I  +K    E   +  +D Q      +     
Sbjct: 253 ---HPQAVTIAEG-AMSFAVSPDGKSIAIEKRKWNTSEPARMIILDEQGKEKGIVGQGTL 308

Query: 303 INISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           ++   S+S D S++ +     D++G   LYV   +      ++ D ++     VWSP   
Sbjct: 309 MSRG-SWSSDGSKLAYSIYDEDQQGMRGLYVFDQSTGKTTPVTTDIQSYDSPTVWSPSAR 367

Query: 360 LIAF 363
            ++ 
Sbjct: 368 FLSM 371



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 5/116 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV- 276
             SP+ + +A             ++        K I    +++    +SS+G +   S+ 
Sbjct: 267 AVSPDGKSIAIEKRKWNTSEPARMIILDEQGKEKGIVGQGTLMSRGSWSSDGSKLAYSIY 326

Query: 277 --QKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQI-VFESDREGKEQL 328
              +     +Y  D  +  T  +T  +    S + +SP +  + ++++  EG +QL
Sbjct: 327 DEDQQGMRGLYVFDQSTGKTTPVTTDIQSYDSPTVWSPSARFLSMYQNISEGGKQL 382


>gi|312198300|ref|YP_004018361.1| hypothetical protein FraEuI1c_4498 [Frankia sp. EuI1c]
 gi|311229636|gb|ADP82491.1| WD40 repeat, subgroup [Frankia sp. EuI1c]
          Length = 495

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 81/239 (33%), Gaps = 21/239 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  ++   FSPN + +A A+ D    L         ++    +    S + +  FS
Sbjct: 187 LTGHTAAVWSVAFSPNGRTLATASRDATVRLWDVADPALPEQIAAPLTEHASSVGSVAFS 246

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDRE 323
            +G+    +   D  + ++ V   S        L +     +S ++SP    +   +  +
Sbjct: 247 PDGRTLA-TGSDDGTVRLWDVADPSRPRRAASPLADHRGAVLSVAFSPTQPTLA-TAGED 304

Query: 324 GKEQLYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
              +L+        + R++     D         +SP G  +A   +    +   V    
Sbjct: 305 ATVRLW--DVAVPSRPRLAAGPLTDHAGGVSSVAFSPDGRTLAGGGYDRTVWLWDVTDP- 361

Query: 380 GSQERL----LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            SQ R     L     + +  +SP G +L  +     D    L+++  +      I+ P
Sbjct: 362 -SQPRRAAAPLGHAGRVLSVAFSPDGHALAAASD---DNAVWLWNV-TDPARPRQISAP 415



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 86/256 (33%), Gaps = 27/256 (10%)

Query: 182 ESVVSGIIKNSLCVMD-RDGANIRY---LTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            ++ +G    ++ + D  D +  R            +    FSP Q  +A A  D    L
Sbjct: 250 RTLATGSDDGTVRLWDVADPSRPRRAASPLADHRGAVLSVAFSPTQPTLATAGEDATVRL 309

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
               + +R   A   + +    + +  FS +G+        D  + ++ V    +   R 
Sbjct: 310 WDVAVPSRPRLAAGPLTDHAGGVSSVAFSPDGRTLA-GGGYDRTVWLWDV-TDPSQPRRA 367

Query: 298 TN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRIS---QDKEASYF 350
                     +S ++SPD   +   SD      +++    + +  ++IS     +     
Sbjct: 368 AAPLGHAGRVLSVAFSPDGHALAAASD---DNAVWLWNVTDPARPRQISAPLAPRFGGAL 424

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-----EDSNLQAPTWSPSGRSLI 405
              +S  G ++A      +   + +          +        + L +  +SP G +L 
Sbjct: 425 SVAFSRDGRILA---TGNDDSTVWLWDLTYPSPEQIASPLAGHSAWLLSVAFSPDGHTLA 481

Query: 406 FSRKKDGDTGSKLYSI 421
                 GD   +L+ +
Sbjct: 482 ---TGSGDKTVRLWHV 494


>gi|77361865|ref|YP_341440.1| hypothetical protein PSHAa2963 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876776|emb|CAI87998.1| conserved protein of unknown function; putative TolB-type secreted
           protein [Pseudoalteromonas haloplanktis TAC125]
          Length = 943

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 87/251 (34%), Gaps = 23/251 (9%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           I   +  V     K  L  ++R G AN +++    +  L+   FS  +      +     
Sbjct: 349 IADTAPGVFKREQKQVLNQINRAGIANPQWI---NNTTLYFSAFSTEE------SGSYNR 399

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFS--SNGKRALISVQKDEAMDIYSVDLQSNA 293
           +  V+  +T      +++     +    RFS  S+G+       +    ++  V+L +  
Sbjct: 400 VSDVFSYNTETG-NIEQLTELAGIR---RFSVTSDGETLYAEQVRGGYSELVKVNLTTKV 455

Query: 294 TERLTNTL---FINISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRIS-QDKEAS 348
              L +       +     +PD +++ + S       QLY+  ++G  ++ ++  +    
Sbjct: 456 VTELFSKSLKTAYDY-PILNPDETKLAYLSASLNENWQLYIQNTDGEHRQSVAMPNGYQY 514

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFS 407
              P +S  G+ + F         I            L +    +  P     G  L FS
Sbjct: 515 LSQPSFSQNGESLYFIAGLNSATDIYSYHIASKTLTKLTQGQEAVAHPVEMADGSLLYFS 574

Query: 408 RKKDGDTGSKL 418
              DG    +L
Sbjct: 575 ISADGPNIKQL 585



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 12/134 (8%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPRFSSNGKRALI 274
            P  +P++ K+AY +    +  ++Y+ +T    R    + N    +  P FS NG+    
Sbjct: 470 YPILNPDETKLAYLSASLNENWQLYIQNTDGEHRQSVAMPNGYQYLSQPSFSQNGESLYF 529

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               + A DIYS  + S    +LT             D S + F            + ++
Sbjct: 530 IAGLNSATDIYSYHIASKTLTKLTQGQEAVAHPVEMADGSLLYFS-----------ISAD 578

Query: 335 GSDQKRISQDKEAS 348
           G + K++++  + +
Sbjct: 579 GPNIKQLAKTHQGN 592


>gi|209527791|ref|ZP_03276284.1| WD-40 repeat protein [Arthrospira maxima CS-328]
 gi|209491778|gb|EDZ92140.1| WD-40 repeat protein [Arthrospira maxima CS-328]
          Length = 729

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 76/223 (34%), Gaps = 16/223 (7%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VS     +L + +     +          +     SP+ ++    +YD+     + + D
Sbjct: 168 GVSASGDTTLKLWNLKTGRVVRSLQGHTCRVLALAISPSGKRAVSGSYDN----TIKMWD 223

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
            R     + +      + A   + +GKR  +S  KD  + ++  DL +    R  T    
Sbjct: 224 LRTGEELRSLVGHGDWVTAVAITPDGKR-ALSGSKDTTIRLW--DLVTGEEIRTFTGHGD 280

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +  + + +PD  + +  S     + L +      ++ R     E S +    +P G    
Sbjct: 281 LVAAVAITPDGKRALSASF---DKTLKLWDLQTGEELRSLVGHEGSVWAVAITPDGKRAL 337

Query: 363 FTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRS 403
              F      + +      +E    +  + ++ A   +P G  
Sbjct: 338 SGSFDQT---LKLWDLQTGKELRSFVGHEDSVNAVAITPDGER 377



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 104/276 (37%), Gaps = 36/276 (13%)

Query: 109 QVLVTGRVIKEGKDRLRVE----FRLWDVKDRKQIIGKK--------FFSSPASWRKIAH 156
             +    +  +G+  +        +LW++K  + +   +           SP+  R ++ 
Sbjct: 154 DSVNAVAITPDGRAGVSASGDTTLKLWNLKTGRVVRSLQGHTCRVLALAISPSGKRAVSG 213

Query: 157 TISDDI--YQSITGEK-------GDFNSRILFVSE--SVVSGIIKNSLCVMD-RDGANIR 204
           +  + I  +   TGE+       GD+ + +    +    +SG    ++ + D   G  IR
Sbjct: 214 SYDNTIKMWDLRTGEELRSLVGHGDWVTAVAITPDGKRALSGSKDTTIRLWDLVTGEEIR 273

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             T   D +      +P+ ++   A++D      + L D +     + +      + A  
Sbjct: 274 TFTGHGDLVAAV-AITPDGKRALSASFDK----TLKLWDLQTGEELRSLVGHEGSVWAVA 328

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
            + +GKR  +S   D+ + ++  DLQ+    R       +++A + +PD  + +  S   
Sbjct: 329 ITPDGKR-ALSGSFDQTLKLW--DLQTGKELRSFVGHEDSVNAVAITPDGERALSGSF-- 383

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             + L +      ++ R         +D   +P G 
Sbjct: 384 -DKTLKLWDLQTGEELRSFMGHCRWVWDVAITPDGT 418



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/339 (13%), Positives = 104/339 (30%), Gaps = 39/339 (11%)

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIG--------KKFFSSPASWRKIAHTIS--- 159
            +  +G            +LWD++  K++               +P   R ++ +     
Sbjct: 328 AITPDGKRALSGSFDQTLKLWDLQTGKELRSFVGHEDSVNAVAITPDGERALSGSFDKTL 387

Query: 160 --------DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
                   +++   +   +  ++  I       +SG    +L + D              
Sbjct: 388 KLWDLQTGEELRSFMGHCRWVWDVAITPDGTQALSGSFDKTLKLWDLGTEEELDCFHGHS 447

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +     +P+ +     +YD+     + L D R  +  + +      +     + +GKR
Sbjct: 448 HAISAVAITPDDRFALSGSYDE----TLKLWDLRTGQELRCLVGHSDWVRTVAITPDGKR 503

Query: 272 ALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             +S  +D  + ++  DL+S      L        + + S D    +  S+      L +
Sbjct: 504 -ALSGSEDTTLKLW--DLESGQELYSLNGHTDPVRAVAISRDGRWALSGSE---DNTLKL 557

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                  + R     + S      S  G   A +        +  ++       L+    
Sbjct: 558 WDMITLKEIRSFSGHDDSVSAVAISCDGRW-ALSGSEDNTLKLWDLQTGLEVRSLVGHRR 616

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + A   +P G+    +     D   KL+ + L GR   
Sbjct: 617 WVDALAITPDGKQ---ALSGSFDDTLKLWDL-LTGREVR 651


>gi|148552956|ref|YP_001260538.1| peptidase S9 prolyl oligopeptidase [Sphingomonas wittichii RW1]
 gi|148498146|gb|ABQ66400.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Sphingomonas wittichii RW1]
          Length = 642

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/239 (16%), Positives = 72/239 (30%), Gaps = 14/239 (5%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             +      + P+   +    +     +    +      A  +I      I         
Sbjct: 49  NSRAALFEDWLPDGSMLIATRFGATQQIHHVAVP---GGARTQISFGSEPIAEAHVIPGS 105

Query: 270 KRALISVQKDEAMDIYSVDLQS--NATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            R             + +DL+       RLT     N S  +S D S +V+     G   
Sbjct: 106 DRFATVGDTGGDEW-FQLDLRGLAGTATRLTEPTTRNQSPVFSKDGSLLVWARATRGSAA 164

Query: 328 LYVMQSN---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++  +   G   K + +   A     + + +  LI     S  +  +  +     +  
Sbjct: 165 YSLIGVDPKAGGAPKPLYRADGAIDPADIAADKNRLIFVRSLSNREDQLFELDLATGKAA 224

Query: 385 LL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASD 439
            +      +  Q P + P GRSLI       DT  +L  IDL  GR   L     +  +
Sbjct: 225 RIAPKTAPAIYQKPRYLPGGRSLIAISDSGSDT-RQLVEIDLATGRQTVLTPGLGWDVE 282



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 70/200 (35%), Gaps = 9/200 (4%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   + A       D      +      A  R+    +   +P FS +G   + +     
Sbjct: 103 PGSDRFATVGDTGGDEWFQLDLRGLAGTAT-RLTEPTTRNQSPVFSKDGSLLVWARATRG 161

Query: 281 AMDIYSVDLQ---SNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGS 336
           +     + +      A + L         A  + D ++++F  S    ++QL+ +     
Sbjct: 162 SAAYSLIGVDPKAGGAPKPLYRADGAIDPADIAADKNRLIFVRSLSNREDQLFELDLATG 221

Query: 337 DQKRISQDK-EASYFDPVWSPQGD-LIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNL 392
              RI+     A Y  P + P G  LIA +    +   +  +     ++ +L      ++
Sbjct: 222 KAARIAPKTAPAIYQKPRYLPGGRSLIAISDSGSDTRQLVEIDLATGRQTVLTPGLGWDV 281

Query: 393 QAPTWSPSGRSLIFSRKKDG 412
           +    S  GR L ++  +DG
Sbjct: 282 EDYDLSDDGRVLAYAINEDG 301



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 7/137 (5%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PD S ++        +Q++ +   G  + +IS   E      V  P  D  A    +G
Sbjct: 58  WLPDGSMLIATRF-GATQQIHHVAVPGGARTQISFGSEPIAEAHVI-PGSDRFATVGDTG 115

Query: 369 EK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID--LN 424
               F + +    G+  RL    +  Q+P +S  G  L+++R   G     L  +D    
Sbjct: 116 GDEWFQLDLRGLAGTATRLTEPTTRNQSPVFSKDGSLLVWARATRGSAAYSLIGVDPKAG 175

Query: 425 GRNETLINTPAYASDPQ 441
           G  + L      A DP 
Sbjct: 176 GAPKPLYRADG-AIDPA 191



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/236 (20%), Positives = 83/236 (35%), Gaps = 15/236 (6%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
               Q+      +  A+  +IA   +  IYQ      G  +     +     SG     L
Sbjct: 208 NREDQLFELDLATGKAA--RIAPKTAPAIYQKPRYLPGGRS-----LIAISDSGSDTRQL 260

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             +D        LTP     + +   S + + +AYA  +D    RV + D    RA  + 
Sbjct: 261 VEIDLATGRQTVLTPGLGWDVEDYDLSDDGRVLAYAINEDG-FSRVVVQDRVTRRALPQP 319

Query: 254 GNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
              R ++ A +F+ +G+R  I +     A D++S D+   A  R T +    +  +   +
Sbjct: 320 ALPRGVLTALKFTPDGRRLAIGLTSATSAGDVWSWDVDGAALTRWTTSELGELDPARLAE 379

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSPQGDLIA 362
              I F S        +V +  G    R +           +   PVW+      A
Sbjct: 380 PELIRFTSFDGLSVPAFVYRPKGVPADRPTPVIIDIHGGPEAQTRPVWNYGAQYFA 435



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 62/185 (33%), Gaps = 3/185 (1%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             G   R    +   I  +PR+ P  + +   +    D  ++  +D    R         
Sbjct: 219 ATGKAARIAPKTAPAIYQKPRYLPGGRSLIAISDSGSDTRQLVEIDLATGRQTVLTPGLG 278

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQI 316
             +     S +G+    ++ +D    +   D  +  A  +      +  +  ++PD  ++
Sbjct: 279 WDVEDYDLSDDGRVLAYAINEDGFSRVVVQDRVTRRALPQPALPRGVLTALKFTPDGRRL 338

Query: 317 VFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
               +       ++    +G+   R +   E    DP    + +LI FT F G      V
Sbjct: 339 AIGLTSATSAGDVWSWDVDGAALTRWTT-SELGELDPARLAEPELIRFTSFDGLSVPAFV 397

Query: 376 MKKDG 380
            +  G
Sbjct: 398 YRPKG 402


>gi|326799920|ref|YP_004317739.1| hypothetical protein Sph21_2518 [Sphingobacterium sp. 21]
 gi|326550684|gb|ADZ79069.1| hypothetical protein Sph21_2518 [Sphingobacterium sp. 21]
          Length = 951

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 83/204 (40%), Gaps = 5/204 (2%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D A+ +Y   +    LF P  S +   +A    + E+   + ++++      +RI    
Sbjct: 387 YDLASKKYKQLTFKTRLFSPALSADGMHIATIEINLENRASLLILNSTTGAEERRIALPA 446

Query: 258 SMIL-APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQ 315
           ++ +  P F S+G + + +  + +   +  V+LQ+  +  L       +    Y P    
Sbjct: 447 NLNVQTPSFDSSGTKVITTAVQQQGATLLEVNLQTGESRLLMEWQKQQLERPIYIPQG-- 504

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           I+F++   G + LY++  +G   ++I+  K  +  +P +      I F  +    + I  
Sbjct: 505 ILFKAHYNGIDNLYLLPYSGEAPQQITNIKFGA-TNPYYDESSGSIYFNNYQVNGYMISK 563

Query: 376 MKKDGSQERLLVEDSNLQAPTWSP 399
           +  + +  + +    +     + P
Sbjct: 564 LNLEEAFRQSITPSGDSFISYFKP 587



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 10/133 (7%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P+ + +  +       ++  + ++   ++ I   K     +P +S  G+ I + +   +K
Sbjct: 318 PNGNTLALQRSNHSVPKIVSITADNRIEEVI---KTGIQTEPHFSYGGNKITWDELRYDK 374

Query: 371 -------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                    I V      + + L   + L +P  S  G  +        +  S L     
Sbjct: 375 RYLKRNFHVINVYDLASKKYKQLTFKTRLFSPALSADGMHIATIEINLENRASLLILNST 434

Query: 424 NGRNETLINTPAY 436
            G  E  I  PA 
Sbjct: 435 TGAEERRIALPAN 447


>gi|312198090|ref|YP_004018151.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EuI1c]
 gi|311229426|gb|ADP82281.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EuI1c]
          Length = 744

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 75/240 (31%), Gaps = 9/240 (3%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    FSP+   +A  + D    L             + +      + +  
Sbjct: 482 QPLTGPGSWVSSVAFSPDSHTLAAGSDDRRVYLWDVTRPASPTPLGQPLTEPGDWVRSVA 541

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINI-SASYSPDSSQIVFESDR 322
           FS +G     +   D  + ++SV      A  +       ++ S ++SPD   +   S  
Sbjct: 542 FSPDGHTLA-AGSGDGKVYLWSVTGTGATALGQPLQGPGSSVRSMAFSPDGHTLAIGSY- 599

Query: 323 EGKEQLY--VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             K  L+     ++ +   +             +SP    +A +   G+ +   V +  G
Sbjct: 600 NHKIGLWDVTQPASPTPLGQPLTGPTDFVLSVAFSPNSHTLAASSSDGKVYLWDVTRPSG 659

Query: 381 S---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                + L     ++++  +SP GR+L  +      +   +            +  P  A
Sbjct: 660 PTPLGQPLAGPGGSVRSVAFSPDGRALAAAGDNGTVSVWDVARPSSPTAVGQPLTGPGAA 719



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 74/219 (33%), Gaps = 24/219 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A  + D    L             + +    S + +  FS +      +  
Sbjct: 449 ALSPDGHTLAAGSVDQRVYLWDVTRPASPVSLGQPLTGPGSWVSSVAFSPDSHTLA-AGS 507

Query: 278 KDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D  + ++ V   ++ T   + LT       S ++SPD   +   S   G  ++Y+    
Sbjct: 508 DDRRVYLWDVTRPASPTPLGQPLTEPGDWVRSVAFSPDGHTLAAGS---GDGKVYLWSVT 564

Query: 335 GSDQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-----GSQERLL 386
           G+    +    Q   +S     +SP G  +A   +      IG+             + L
Sbjct: 565 GTGATALGQPLQGPGSSVRSMAFSPDGHTLAIGSY---NHKIGLWDVTQPASPTPLGQPL 621

Query: 387 VEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              ++   +  +SP+  +L  S         K+Y  D+ 
Sbjct: 622 TGPTDFVLSVAFSPNSHTLAASSSDG-----KVYLWDVT 655



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 63/177 (35%), Gaps = 19/177 (10%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTLFI 303
             A + +      + +   S +G     +   D+ + ++ V   ++     + LT     
Sbjct: 432 TGAGRALAGPTDKVESVALSPDGHTLA-AGSVDQRVYLWDVTRPASPVSLGQPLTGPGSW 490

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQ----SNGSDQKRISQDKEASYFDPVWSPQGD 359
             S ++SPDS  +   SD     ++Y+      ++ +   +   +         +SP G 
Sbjct: 491 VSSVAFSPDSHTLAAGSD---DRRVYLWDVTRPASPTPLGQPLTEPGDWVRSVAFSPDGH 547

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-----DSNLQAPTWSPSGRSLIFSRKKD 411
            +A     G    + +    G+    L +      S++++  +SP G +L       
Sbjct: 548 TLAAGSGDG---KVYLWSVTGTGATALGQPLQGPGSSVRSMAFSPDGHTLAIGSYNH 601



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 79/251 (31%), Gaps = 36/251 (14%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV-KDRKQ 138
              S     Q +T P    R   ++  G   L  G     G  ++     LW V      
Sbjct: 519 RPASPTPLGQPLTEPGDWVRSVAFSPDG-HTLAAGS----GDGKV----YLWSVTGTGAT 569

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC--VM 196
            +G+      +S R +A   S D +                 + ++ S   K  L     
Sbjct: 570 ALGQPLQGPGSSVRSMA--FSPDGH-----------------TLAIGSYNHKIGLWDVTQ 610

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
                 +          +    FSPN   +A ++ D +  L      +      + +   
Sbjct: 611 PASPTPLGQPLTGPTDFVLSVAFSPNSHTLAASSSDGKVYLWDVTRPSGPTPLGQPLAGP 670

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDS 313
              + +  FS +G+    +   +  + ++ V   S+ T   + LT       + ++SP S
Sbjct: 671 GGSVRSVAFSPDGRALAAAGD-NGTVSVWDVARPSSPTAVGQPLTGPGAAVTALAFSPRS 729

Query: 314 SQIVFES-DRE 323
             +   S DR 
Sbjct: 730 GTLAAASEDRS 740


>gi|297617545|ref|YP_003702704.1| hypothetical protein Slip_1376 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145382|gb|ADI02139.1| conserved hypothetical protein [Syntrophothermus lipocalidus DSM
           12680]
          Length = 455

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 60/163 (36%), Gaps = 20/163 (12%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S + +             +    L     +  T    I+ S  +SPDS +  F   R   
Sbjct: 23  SPDRRSVAFVAGGSGRETVM---LNQRELK--TTEKVISGSLVFSPDSQRTAFVVRRGDG 77

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + V   +G ++K      E S    V+SP    +AF   + E   I V+     + R 
Sbjct: 78  QAVVV---DGKEKKVYQGILENSL---VFSPDSRRLAFAAQADEGQFI-VVD---GKARK 127

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             E     +  +SP  + + ++   D +     + + ++GR +
Sbjct: 128 YYEGILQGSLVFSPDSKKIAYAAAVDEE-----WRLVVDGREK 165



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 86/241 (35%), Gaps = 36/241 (14%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R L  +   I     FSP+ Q+ A+     +    V      +D   K++        
Sbjct: 44  NQRELKTTEKVISGSLVFSPDSQRTAFVVRRGDGQAVV------VDGKEKKVYQGILENS 97

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFES 320
              FS + +R   + Q DE   I        A +       I   S  +SPDS +I + +
Sbjct: 98  L-VFSPDSRRLAFAAQADEGQFIVV---DGKARK---YYEGILQGSLVFSPDSKKIAYAA 150

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             + + +L V       ++++  D  A     ++SP    IA       K+++ V   DG
Sbjct: 151 AVDEEWRLVV-----DGREKLVCDGVA-MGTVLFSPNSARIACAAQFDNKWSVWV---DG 201

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR------NETLINTP 434
              + L       +  +SP  + L ++             + L+GR      N+ L+   
Sbjct: 202 RS-QSLYNAIGGSSLVFSPDSQHLAYAALIGSKR------VMLDGRYAPWPGNKQLVVLD 254

Query: 435 A 435
            
Sbjct: 255 G 255



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 23/201 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPR-----FSSNGK 270
           FSP+ Q +AYA       + +           + +   G  +    A       FS + +
Sbjct: 217 FSPDSQHLAYAALIGSKRVMLDGRYAPWPGNKQLVVLDGVEQKYYDAVAGDSLTFSPDSQ 276

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
               + Q  E  +I +V +      R    +       +S DS  + F      K+  ++
Sbjct: 277 HLAYAAQ--EGFEIVTV-VDGAEIGRY-QGIGGETM-VFSADSRHLAFAVK---KQDKWL 328

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +  +G +          S    ++SP    +A+    GEK  I V   + +    +  +S
Sbjct: 329 VILDGKEGPAYDGILRGSL---IFSPDSKHLAYAAQKGEKIVIVVDHDEIAGYDAVTGES 385

Query: 391 NLQAPTWSPSGRSLIFSRKKD 411
                 +SP    L+++ +  
Sbjct: 386 L----VFSPDSSHLVWAAQDG 402



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 28/168 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISV 276
            FSP+ Q +AYA  +  +I+ V             IG ++ +      FS++ +    +V
Sbjct: 270 TFSPDSQHLAYAAQEGFEIVTVV--------DGAEIGRYQGIGGETMVFSADSRHLAFAV 321

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFIN----ISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +K    D + V L              +     S  +SPDS  + + +  +G++ + V+ 
Sbjct: 322 KK---QDKWLVILDGKE------GPAYDGILRGSLIFSPDSKHLAYAAQ-KGEKIVIVVD 371

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +      I+     +    V+SP    + +    G +  + V    G
Sbjct: 372 HD-----EIAGYDAVTGESLVFSPDSSHLVWAAQDGHRQYVAVDGAPG 414


>gi|313203343|ref|YP_004042000.1| wd40-like beta propeller containing protein [Paludibacter
           propionicigenes WB4]
 gi|312442659|gb|ADQ79015.1| WD40-like beta Propeller containing protein [Paludibacter
           propionicigenes WB4]
          Length = 486

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 79/260 (30%), Gaps = 50/260 (19%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----------- 278
               +D   +   + ++ +   + GN  S  +   F  +G+  + S  K           
Sbjct: 190 HLRGKDGGTILNRNGKLRKLTLKSGNMISAAVYGAFHPSGRFGVFSTNKIIPELHMHGSR 249

Query: 279 -----DEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESD--------- 321
                D A D+   D   N   +   L+N         +S D   I F S          
Sbjct: 250 RMEVYDTASDVVVADFDDNRMLQSPLLSNPDVFETFPVFSADGKSIYFCSAPKVSLPNDV 309

Query: 322 REGKEQLYVMQSN------GSDQKRISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAI 373
           ++ K  +  +  +      G+    +   +           SP G  I +T      F I
Sbjct: 310 KKLKYSICRIAFDADKKQFGTKVDTLWNARLTGKSACHLKTSPDGKYILYTVADYGTFPI 369

Query: 374 G-------VMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY--SI 421
                   +M         L     D +    +WS + R  +F+ K+D     K Y   +
Sbjct: 370 WHRETDLQLMNLQTGVVDKLTMVNSDKSDTYHSWSSTSRWFVFASKRDDGQYGKPYFAYV 429

Query: 422 DLNGRNETLINTPAYASDPQ 441
           D +G+       P    DP 
Sbjct: 430 DKSGKVRKPFVLPQE--DPA 447



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 84/243 (34%), Gaps = 45/243 (18%)

Query: 141 GKKFFSSPASWRKI----AHTISDDIYQSITGEK--GDFNSRILFVSESVVSGIIKNSLC 194
           G    +     RK+     + IS  +Y +       G F++  +     +  G  +  + 
Sbjct: 196 GGTILNRNGKLRKLTLKSGNMISAAVYGAFHPSGRFGVFSTNKIIPELHMH-GSRRMEVY 254

Query: 195 -----VMDRDGANIRYL----TPSRDQILFEPRFSPNQQKVAYATY------DDEDILRV 239
                V+  D  + R L      + D     P FS + + + + +       +D   L+ 
Sbjct: 255 DTASDVVVADFDDNRMLQSPLLSNPDVFETFPVFSADGKSIYFCSAPKVSLPNDVKKLKY 314

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRF----------SSNGKRALISVQKDEAMDIY---- 285
            +     D   K+ G     +   R           S +GK  L +V       I+    
Sbjct: 315 SICRIAFDADKKQFGTKVDTLWNARLTGKSACHLKTSPDGKYILYTVADYGTFPIWHRET 374

Query: 286 ---SVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNGS 336
               ++LQ+   ++LT  N+   +   S+S  S   VF S R+    GK     +  +G 
Sbjct: 375 DLQLMNLQTGVVDKLTMVNSDKSDTYHSWSSTSRWFVFASKRDDGQYGKPYFAYVDKSGK 434

Query: 337 DQK 339
            +K
Sbjct: 435 VRK 437


>gi|302654807|ref|XP_003019202.1| hypothetical protein TRV_06751 [Trichophyton verrucosum HKI 0517]
 gi|291182910|gb|EFE38557.1| hypothetical protein TRV_06751 [Trichophyton verrucosum HKI 0517]
          Length = 565

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 60/191 (31%), Gaps = 13/191 (6%)

Query: 195 VMDRDGANIR--YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + D+ G  +R  +        ++   FS +  K+A  + D      V + D+       R
Sbjct: 264 LCDKSGFPLRTAFELSHHTNEVWYLEFSHDGTKLATTSRD----CTVLIYDSTTFEIIHR 319

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      +    +S +  +  I+  +D    ++ V         + +      SAS++PD
Sbjct: 320 LTEHSEPVAYATWSPDDTKL-ITCSQDFKAKLWDVP-SGTCLLTIEHHHAPITSASWAPD 377

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               V     + + QL             +   +    D   +P G  +           
Sbjct: 378 GESFV-TGSLDSQSQLCHWSVPHKSL-LYTWPGQYRVRDCAITPDGKRLIAISLQK---R 432

Query: 373 IGVMKKDGSQE 383
           I V      +E
Sbjct: 433 IYVYNFITREE 443



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/238 (12%), Positives = 78/238 (32%), Gaps = 25/238 (10%)

Query: 114 GRVIKE---GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD-------DIY 163
           G +         RL V   L D   + QI    + ++  S    +  + D         +
Sbjct: 220 GSISPSVMIPDHRLAV---LLDQVKQTQINNCLYHNTAVSPSLYSDHLCDKSGFPLRTAF 276

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +        +          + +     ++ + D     I +      + +    +SP+ 
Sbjct: 277 ELSHHTNEVWYLEFSHDGTKLATTSRDCTVLIYDSTTFEIIHRLTEHSEPVAYATWSPDD 336

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            K+   + D +      L D         I +  + I +  ++ +G+   ++   D    
Sbjct: 337 TKLITCSQDFK----AKLWDVPSGTCLLTIEHHHAPITSASWAPDGES-FVTGSLDSQSQ 391

Query: 284 I--YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +  +SV  +S            +   + +PD  +++  S    ++++YV      +++
Sbjct: 392 LCHWSVPHKSLLYTWPGQYRVRDC--AITPDGKRLIAISL---QKRIYVYNFITREEE 444


>gi|302506160|ref|XP_003015037.1| hypothetical protein ARB_06797 [Arthroderma benhamiae CBS 112371]
 gi|291178608|gb|EFE34397.1| hypothetical protein ARB_06797 [Arthroderma benhamiae CBS 112371]
          Length = 541

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 60/191 (31%), Gaps = 13/191 (6%)

Query: 195 VMDRDGANIR--YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + D+ G  +R  +        ++   FS +  K+A  + D      V + D+       R
Sbjct: 240 LCDKSGFPLRTAFELSHHTNEVWYLEFSHDGTKLATTSRD----CTVLIYDSTTFEIIHR 295

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      +    +S +  +  I+  +D    ++ V         + +      SAS++PD
Sbjct: 296 LTEHSEPVAYATWSPDDTKL-ITCSQDFKAKLWDVP-SGTCLLTIEHHHAPITSASWAPD 353

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               V     + + QL             +   +    D   +P G  +           
Sbjct: 354 GESFV-TGSLDSQSQLCHWSVPHKSL-LYTWPGQYRVRDCAITPDGKRLIAISLQK---R 408

Query: 373 IGVMKKDGSQE 383
           I V      +E
Sbjct: 409 IYVYNFITREE 419



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/219 (11%), Positives = 73/219 (33%), Gaps = 19/219 (8%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISD-------DIYQSITGEKGDFNSRILFVSE 182
           L D   + QI    + ++  S    +  + D         ++        +         
Sbjct: 212 LLDQVKQTQINNCLYHNTAVSPSLYSDHLCDKSGFPLRTAFELSHHTNEVWYLEFSHDGT 271

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + +     ++ + D     I +      + +    +SP+  K+   + D +      L 
Sbjct: 272 KLATTSRDCTVLIYDSTTFEIIHRLTEHSEPVAYATWSPDDTKLITCSQDFK----AKLW 327

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI--YSVDLQSNATERLTNT 300
           D         I +  + I +  ++ +G+   ++   D    +  +SV  +S         
Sbjct: 328 DVPSGTCLLTIEHHHAPITSASWAPDGES-FVTGSLDSQSQLCHWSVPHKSLLYTWPGQY 386

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +   + +PD  +++  S    ++++YV      +++
Sbjct: 387 RVRDC--AITPDGKRLIAISL---QKRIYVYNFITREEE 420


>gi|332709341|ref|ZP_08429303.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332351887|gb|EGJ31465.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1552

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 75/194 (38%), Gaps = 21/194 (10%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            S   +++A  +  D++ L  + +D +     + I N +S+ +    S +GK+  +    D
Sbjct: 1217 SSKGRQIA--SLGDDNTLVWWKLDQKPLEELELIPNLKSISI----SPDGKQLAVVGSDD 1270

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                I  +DL+    +R  +         +SPD +Q+        + ++ ++  NG++  
Sbjct: 1271 ---TIRLLDLKGKELKRFPDLKTTIRQIIFSPDGTQLA---GVGQENRIRLLDLNGNELY 1324

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--------VEDSN 391
            + S++   +    ++SP G  +   +     +  G      S    L         E   
Sbjct: 1325 K-SKNFNKTISQLLFSPDGTQLLVVENDSTVYPQGYDDNKTSTLHRLNLNSKIWKTEPKL 1383

Query: 392  LQAPTWSPSGRSLI 405
                 +S  G+ L+
Sbjct: 1384 WGEIAFSSDGKLLV 1397


>gi|300870275|ref|YP_003785146.1| Tol transport system component [Brachyspira pilosicoli 95/1000]
 gi|300687974|gb|ADK30645.1| Tol transport system component [Brachyspira pilosicoli 95/1000]
          Length = 2322

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 18/171 (10%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQ 327
           G     S +     DI++VD  +  T RLT +  ++ S S    S  +VF S R+     
Sbjct: 58  GTWVYYSRENAGNTDIFAVDSYTLETFRLTRSPGVDSSVSVDSKSKYLVFSSTRDDAFSD 117

Query: 328 LYVMQSNGSDQK--------------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-A 372
           +Y+ +      +              RI+ D +    DP  S   D+IAF     +    
Sbjct: 118 IYLYKLVNLGIRTSKNNLENLEQSVVRIT-DYKGYDTDPEISHNADMIAFVSDREDNIKK 176

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +  +K +G +  +   D    +PT+S + R + F   K G+  S+L  +DL
Sbjct: 177 LFTVKPNGKEI-IKRADIEAASPTFSFNDRHIAFITSKIGEPYSQLAVVDL 226



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 69/197 (35%), Gaps = 21/197 (10%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
               +P  S N   +A+ +  +++I +++ +        KR         +P FS N + 
Sbjct: 150 GYDTDPEISHNADMIAFVSDREDNIKKLFTVKPNGKEIIKR---ADIEAASPTFSFNDRH 206

Query: 272 ALISVQKDEAM--DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQL 328
                 K       +  VDLQ+N+   +TN   I  +     D+    F  S       +
Sbjct: 207 IAFITSKIGEPYSQLAVVDLQANS--YITND--IQTNLMILTDTKTFKFNPSFYNNDTII 262

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y   +N +D     +D   +Y           +     S  ++ +       S   +  E
Sbjct: 263 YFEIANDTD-----KDGNLTYN------DKRRLMSYSLSTGQYYVLEENTSLSTFNVAYE 311

Query: 389 DSNLQAPTWSPSGRSLI 405
            + + +   S SG S++
Sbjct: 312 SALVGSYVLSTSGTSIV 328


>gi|291571295|dbj|BAI93567.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 1167

 Score = 66.2 bits (160), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 73/201 (36%), Gaps = 25/201 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ + +A  +   +  ++++  D  +      I +F    +A  FS
Sbjct: 551 FSGHRGSINNISFSPDGRLIA--SVGQDKTVKLWQPDGELWAN---ISSFADETIAINFS 605

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SA----SYSPDSSQIVFES 320
            +  +  + V +D  + +++V          T                +SPD   I   S
Sbjct: 606 PDNHQIAVGV-RDGNVQVWNV-----KPTPPTLEYSWEAHQQPVMYVVFSPDGKMIASVS 659

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G  +L+ +   G     ++ D         +SP G+ IA     GE   I + K +G
Sbjct: 660 L-DGSAKLWKIN--GELLTTLTNDG-IPRRAIAFSPDGETIAV---GGESGIIELFKSNG 712

Query: 381 SQERLL-VEDSNLQAPTWSPS 400
           S  + L   +  +    +SP 
Sbjct: 713 SPLKTLPHHEGEVMKIAFSPD 733



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 71/187 (37%), Gaps = 15/187 (8%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             + ++    +  +   L  T        R    R  I    FS +G+    SV +D+ +
Sbjct: 521 NHLVWSDSSIKAQVESVLSQTAYSVQEFNRFSGHRGSINNISFSPDGRLIA-SVGQDKTV 579

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++  D        +++     I+ ++SPD+ QI     R+G  Q++ ++      +   
Sbjct: 580 KLWQPD--GELWANISSFADETIAINFSPDNHQIA-VGVRDGNVQVWNVKPTPPTLEYSW 636

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWS 398
           +  +      V+SP G +IA     G    +  +  +     LL   +N   P     +S
Sbjct: 637 EAHQQPVMYVVFSPDGKMIASVSLDGSA-KLWKINGE-----LLTTLTNDGIPRRAIAFS 690

Query: 399 PSGRSLI 405
           P G ++ 
Sbjct: 691 PDGETIA 697



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 74/218 (33%), Gaps = 17/218 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +  +      + Y   +  Q +    FSP+ + +A  + D    L     +        
Sbjct: 621 QVWNVKPTPPTLEYSWEAHQQPVMYVVFSPDGKMIASVSLDGSAKLWKINGELLTT---- 676

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            + N      A  FS +G+   +     E+  I       +  + L +     +  ++SP
Sbjct: 677 -LTNDGIPRRAIAFSPDGETIAV---GGESGIIELFKSNGSPLKTLPHHEGEVMKIAFSP 732

Query: 312 DSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           D  Q+V  S DR     + +  + G   + I +D +   +   +SP    IA        
Sbjct: 733 DYDQLVSASRDRT----IKISNTKGEILQTI-KDHDDEVWAIAFSPDRQFIASGSRDQTV 787

Query: 371 FAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGRSLI 405
                   D     +E        + A ++SP  ++L+
Sbjct: 788 RLWKKSPIDQLYYPREVFRSHQGEVDAVSFSPDSQTLV 825



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 86/241 (35%), Gaps = 19/241 (7%)

Query: 177  ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            I+F + S V  S     ++ + D  G N           + +  FSPN + +A +++D  
Sbjct: 856  IVFNATSGVMASASSDQTIKLWDFMG-NPLATLTGHITRVNQLAFSPNGEWLASSSHDG- 913

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                V L +   +   +   + ++ +   +F+ + ++ + +   D  + ++  D   N  
Sbjct: 914  ---TVKLWNLASNSVHRNFTDHQASVWGLQFTPDSQKLV-TASWDNTLKMW--DKYGNIL 967

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +  +             D   +V  S       L +   +G     ++  K+  +   ++
Sbjct: 968  QVFSGHTGAVWGVDIRSDGEMMVSSSH---DNMLKLWGLDGRLYSGLNGHKDGVWSV-LF 1023

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGS----QERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            SP GDLIA +        + +             L      +    +S +G+ L  + + 
Sbjct: 1024 SPDGDLIA-SGSRDRTVKLWLWDPTAQTYNLDHTLSGHQGIVIQVAFSNNGQYLASASED 1082

Query: 411  D 411
             
Sbjct: 1083 Q 1083



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 41/300 (13%), Positives = 94/300 (31%), Gaps = 58/300 (19%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VS     ++ + +  G  ++ +    D++ +   FSP++Q +A  + D    L       
Sbjct: 738  VSASRDRTIKISNTKGEILQTIKDHDDEV-WAIAFSPDRQFIASGSRDQTVRLWKKSPID 796

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRAL------------------------------- 273
            ++    +   + +  + A  FS + +  +                               
Sbjct: 797  QLYYPREVFRSHQGEVDAVSFSPDSQTLVSGSWDRTLRLWKTHHPLMTNFPAHEGEIWDI 856

Query: 274  ---------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
                      S   D+ + ++  D   N    LT  +      ++SP+   +   S  +G
Sbjct: 857  VFNATSGVMASASSDQTIKLW--DFMGNPLATLTGHITRVNQLAFSPNGEWLA-SSSHDG 913

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              +L+      +   R   D +AS +   ++P    +    +      + +  K G+  +
Sbjct: 914  TVKLW--NLASNSVHRNFTDHQASVWGLQFTPDSQKLVTASWDNT---LKMWDKYGNILQ 968

Query: 385  LLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +       +        G  ++ S     D   KL+ +D       L +      D  W 
Sbjct: 969  VFSGHTGAVWGVDIRSDGEMMVSSSH---DNMLKLWGLDG-----RLYSGLNGHKDGVWS 1020



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 53/309 (17%), Positives = 110/309 (35%), Gaps = 29/309 (9%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D K I       S   W+     ++      I      F+     ++    SGI    + 
Sbjct: 651 DGKMIASVSLDGSAKLWKINGELLTTLTNDGIPRRAIAFSPDGETIAVGGESGI----IE 706

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +   +G+ ++ L P  +  + +  FSP+  ++  A+ D     R   +        + I 
Sbjct: 707 LFKSNGSPLKTL-PHHEGEVMKIAFSPDYDQLVSASRD-----RTIKISNTKGEILQTIK 760

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYS---VDLQSNATERLTNTLFINISASYSP 311
           +    + A  FS + +    S  +D+ + ++    +D      E   +      + S+SP
Sbjct: 761 DHDDEVWAIAFSPDRQFIA-SGSRDQTVRLWKKSPIDQLYYPREVFRSHQGEVDAVSFSP 819

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFSGE 369
           DS  +V  S  +   +L+      +    ++     E   +D V++    ++A       
Sbjct: 820 DSQTLVSGS-WDRTLRLWK-----THHPLMTNFPAHEGEIWDIVFNATSGVMASASSDQT 873

Query: 370 KFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              I +    G+    L    + +    +SP+G  L  S   DG    KL+++  N  + 
Sbjct: 874 ---IKLWDFMGNPLATLTGHITRVNQLAFSPNGEWLA-SSSHDGTV--KLWNLASNSVHR 927

Query: 429 TLINTPAYA 437
              +  A  
Sbjct: 928 NFTDHQASV 936



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 55/148 (37%), Gaps = 5/148 (3%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VS    N L +   DG  +          ++   FSP+   +A  + D    L ++    
Sbjct: 990  VSSSHDNMLKLWGLDG-RLYSGLNGHKDGVWSVLFSPDGDLIASGSRDRTVKLWLWDPTA 1048

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +       +   + +++   FS+NG+    S  +D+ + ++S     ++   L     + 
Sbjct: 1049 QTYNLDHTLSGHQGIVIQVAFSNNGQYLA-SASEDQTVRVWS--RYGDSLVHLGGNCGMV 1105

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +  +SPD   +       G   L+ + 
Sbjct: 1106 RTVEFSPDDQILA-NGGANGTITLWQID 1132


>gi|326480614|gb|EGE04624.1| WD domain-containing protein [Trichophyton equinum CBS 127.97]
          Length = 565

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 60/191 (31%), Gaps = 13/191 (6%)

Query: 195 VMDRDGANIR--YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + D+ G  +R  +        ++   FS +  K+A  + D      V + D+       R
Sbjct: 230 LCDKSGFPLRTAFELSHHTNEVWYLEFSHDGTKLATTSRD----CTVLIYDSTTFEIIHR 285

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      +    +S +  +  I+  +D    ++ V         + +      SAS++PD
Sbjct: 286 LTEHSEPVAYATWSPDDSKL-ITCSQDFKAKLWDVP-SGTCLLTIEHHHAPITSASWAPD 343

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               V     + + QL             +   +    D   +P G  +           
Sbjct: 344 GESFV-TGSLDSQSQLCHWSVPHKSL-LYTWPGQYRVRDCAITPDGKRLIAISLQK---R 398

Query: 373 IGVMKKDGSQE 383
           I V      +E
Sbjct: 399 IYVYNFITREE 409



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/219 (11%), Positives = 73/219 (33%), Gaps = 19/219 (8%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISD-------DIYQSITGEKGDFNSRILFVSE 182
           L D   + QI    + ++  S    +  + D         ++        +         
Sbjct: 202 LLDQVKQTQINNCLYHNTAVSPSLYSDHLCDKSGFPLRTAFELSHHTNEVWYLEFSHDGT 261

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + +     ++ + D     I +      + +    +SP+  K+   + D +      L 
Sbjct: 262 KLATTSRDCTVLIYDSTTFEIIHRLTEHSEPVAYATWSPDDSKLITCSQDFK----AKLW 317

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI--YSVDLQSNATERLTNT 300
           D         I +  + I +  ++ +G+   ++   D    +  +SV  +S         
Sbjct: 318 DVPSGTCLLTIEHHHAPITSASWAPDGES-FVTGSLDSQSQLCHWSVPHKSLLYTWPGQY 376

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +   + +PD  +++  S    ++++YV      +++
Sbjct: 377 RVRDC--AITPDGKRLIAISL---QKRIYVYNFITREEE 410


>gi|294011677|ref|YP_003545137.1| dipeptidyl-peptidase 4 [Sphingobium japonicum UT26S]
 gi|292675007|dbj|BAI96525.1| dipeptidyl-peptidase 4 [Sphingobium japonicum UT26S]
          Length = 738

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 74/233 (31%), Gaps = 63/233 (27%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           ++ +GK  L+ V  D  + + ++D       RLT+T    ++   SP    + F   R G
Sbjct: 120 WAPDGKSILVPV--DGDLYLAALD---GKVTRLTDTPDGELNGVVSPKGGYVSFV--RGG 172

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQGDLIAFTKFSG 368
               + +Q  G  +++++Q    +    V                WSP   LIA  +   
Sbjct: 173 N---FFVQPMGGAERQLTQGAGDTVSWGVAEFVAQEEMDRRTGYWWSPDDRLIAVARVDE 229

Query: 369 EKF------------------------------AIGVMKKDGSQERL----LVEDSNLQA 394
                                             + VMK +G  +         D  L  
Sbjct: 230 GPVGTVTRTAIGGEGTKVYQQRYPAAGTPNALVDLYVMKPEGGGQVKVDLGTERDIYLAR 289

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
             WS  GR+L   R+        L ++D       +I T    S   W+   +
Sbjct: 290 VDWSKDGRTLYVQRESRDQKTLDLLAVDPATGKARVILTERAKS---WINLSN 339



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 95/273 (34%), Gaps = 51/273 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRV-----------------------------YLMDTRIDR 248
            +SP+ + +A A  D+  +  V                             Y+M      
Sbjct: 214 WWSPDDRLIAVARVDEGPVGTVTRTAIGGEGTKVYQQRYPAAGTPNALVDLYVMKPEGGG 273

Query: 249 APKR-IGNFRSMILA-PRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLF-- 302
             K  +G  R + LA   +S +G+   +    +  + +D+ +VD  +     +       
Sbjct: 274 QVKVDLGTERDIYLARVDWSKDGRTLYVQRESRDQKTLDLLAVDPATGKARVILTERAKS 333

Query: 303 -INISASYSP--DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            IN+S +++P  D S  ++ S+R G   LY ++  G     ++   +    D V   +G 
Sbjct: 334 WINLSNNFTPLKDGS-FLWWSERTGHGHLYHVR--GGKWTALTS-GDWEVRDVVGVDEGR 389

Query: 360 LIAF---TKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSG--RSLIFSRKKDGD 413
            + +    + +  +  + V         R L              G    ++ +R  + D
Sbjct: 390 GLVYFTGNRETPLEQQLYVASLAKAGPLRQLTATGWWNDAVM--DGAASRIVVARS-NAD 446

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
              ++Y  D  G+    ++  A   D  +  ++
Sbjct: 447 QPRQVYLADSAGKQLNWLSENAIKGDHPYAPYL 479



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 35/109 (32%), Gaps = 35/109 (32%)

Query: 355 SPQGDLIAFTKFS---GEKFAIGVMKKDGSQERLLVEDSNLQA----------------- 394
           SP G L+   K      E+  +  +      ER+LV+     +                 
Sbjct: 49  SPDGKLVTLLKPRTDEKERLDLWAIDTSTGAERMLVDSKKTGSGAALSEAEKMQRERDRS 108

Query: 395 ---------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                      W+P G+S++            LY   L+G+   L +TP
Sbjct: 109 VAGSTGIVGYDWAPDGKSILV------PVDGDLYLAALDGKVTRLTDTP 151


>gi|294499646|ref|YP_003563346.1| putative lipoprotein [Bacillus megaterium QM B1551]
 gi|294349583|gb|ADE69912.1| putative lipoprotein [Bacillus megaterium QM B1551]
          Length = 355

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 54/117 (46%), Gaps = 10/117 (8%)

Query: 266 SSNGKRALISVQKD-EAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIV--FE 319
           S NGK+  +  QKD +   +   DL+ +   +L   T    +    S+SPD S++   F 
Sbjct: 240 SPNGKQLALVQQKDAQTRTLSITDLKGSEAFQLALSTQIFGV----SWSPDGSKLAYNFI 295

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           S++EG + +++      D   ++ + + +     WS  G+ +  + F+  +    ++
Sbjct: 296 SEKEGDKGIFIADGLTGDVTHLNVNLDYAADQLDWSQSGNKLVASSFTQNQVHTYII 352



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 50/255 (19%), Positives = 95/255 (37%), Gaps = 51/255 (20%)

Query: 228 YATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + ++D      VY  +       +++   +     +  A + S NG+     V K E   
Sbjct: 80  FRSHDFG-PKEVYAQNLATYNLKNKSTFVLHPSNEIQHAAKLSPNGEYLFYKVAKGEDTF 138

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---------------------DR 322
            Y ++LQ+  T ++ N L    S  +  ++S+++F +                     DR
Sbjct: 139 GYIMNLQTKKTVKIKNVLLYPSSGEWL-NNSEVMFITMEGKLSKANVKGEVEPLLHRDDR 197

Query: 323 --------EG------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                    G        QL+ + +  +D ++I      +    + SP G  +A  +   
Sbjct: 198 ILDAVKGIGGIYYIGVNNQLFFLHNEQTDPEKI----RDNVVSIIPSPNGKQLALVQQKD 253

Query: 369 EKFA-IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSID-LN 424
            +   + +    GS+   L   + +   +WSP G  L   F  +K+GD G  ++  D L 
Sbjct: 254 AQTRTLSITDLKGSEAFQLALSTQIFGVSWSPDGSKLAYNFISEKEGDKG--IFIADGLT 311

Query: 425 GRNETLINTPAYASD 439
           G    L     YA+D
Sbjct: 312 GDVTHLNVNLDYAAD 326



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 44/115 (38%), Gaps = 5/115 (4%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--ISVQ 277
           SPN +++A     D     + + D +   A +   +  + I    +S +G +       +
Sbjct: 240 SPNGKQLALVQQKDAQTRTLSITDLKGSEAFQLALS--TQIFGVSWSPDGSKLAYNFISE 297

Query: 278 KDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           K+    I+  D  +     L  N  +      +S   +++V  S  + +   Y++
Sbjct: 298 KEGDKGIFIADGLTGDVTHLNVNLDYAADQLDWSQSGNKLVASSFTQNQVHTYII 352



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 39/115 (33%), Gaps = 7/115 (6%)

Query: 310 SPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTKF 366
           SP+  Q+     ++ + + L +    GS+  +++   +   F   WSP G  +A  F   
Sbjct: 240 SPNGKQLALVQQKDAQTRTLSITDLKGSEAFQLALSTQ--IFGVSWSPDGSKLAYNFISE 297

Query: 367 SGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                 I +          L    D       WS SG  L+ S        + + 
Sbjct: 298 KEGDKGIFIADGLTGDVTHLNVNLDYAADQLDWSQSGNKLVASSFTQNQVHTYII 352


>gi|158341025|ref|YP_001522192.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158311266|gb|ABW32878.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1197

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 49/333 (14%), Positives = 109/333 (32%), Gaps = 39/333 (11%)

Query: 109  QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI---IGKKFFSSPASW----RKIAHTISDD 161
            +    G+++  G     V  RLWD +  + +   +G     S  +W    R +     D 
Sbjct: 799  EYCANGQILASGSADNTV--RLWDAQTGQCLKCLLGHFSRVSAIAWHPSTRSLVSGSEDS 856

Query: 162  IYQSITGEKGDFNSRILFVSESVVS------------GIIKNSLCVMDRDGANIRYLTPS 209
              +    + G     I   ++ V +            G     L + D       +    
Sbjct: 857  TVKVWNKQSGQLMKHIYGHNDCVWTIAFSPNQPIIAVGSNDRGLRIWDTQTGQCLHDLAG 916

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
                +    +S + Q +   TY  E    + + D    R  + +            S +G
Sbjct: 917  HTGRVKTVAYSADGQLLVSVTYGYE----IKVWDPEEGRCLQTLQTSGKWCWDTALSHDG 972

Query: 270  KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +   +S       +I   +L +      L      ++  ++SPDS +I   S     + +
Sbjct: 973  RTLAMS---GGDNEIQLKNLGTGQQLAPLVGHQDYSLGIAFSPDSQRIASTS---WDQTV 1026

Query: 329  YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
             +   +  +  +   D + ++    + P  + +  T  +G    +  +  +G    +L  
Sbjct: 1027 KLWDLSTGECLQTIPDDDWAWTL-AYHPF-EPLVVTGCNGGTVKLWDI-TNGQCLNVLKG 1083

Query: 388  EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                +    +SP G++++       D   KL+ 
Sbjct: 1084 HQGLVMTVCFSPDGQTIV---SGSADRTIKLWD 1113



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 81/264 (30%), Gaps = 52/264 (19%)

Query: 113  TGRVIK---EGKDRLRV------EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            TGRV         +L V      E ++WD ++ + +   +                    
Sbjct: 918  TGRVKTVAYSADGQLLVSVTYGYEIKVWDPEEGRCLQTLQ-------------------- 957

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
               T  K  +++ +     ++      N + + +                     FSP+ 
Sbjct: 958  ---TSGKWCWDTALSHDGRTLAMSGGDNEIQLKNLGTGQQLAPLVGHQDYSLGIAFSPDS 1014

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF---RSMILAPRFSSNGKRALISVQKDE 280
            Q++A  ++D      V L D       + I +     ++   P F       +++     
Sbjct: 1015 QRIASTSWDQ----TVKLWDLSTGECLQTIPDDDWAWTLAYHP-FEP----LVVTGCNGG 1065

Query: 281  AMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQ 338
             + ++  D+ +      L     + ++  +SPD   IV  S DR     + +   +    
Sbjct: 1066 TVKLW--DITNGQCLNVLKGHQGLVMTVCFSPDGQTIVSGSADRT----IKLWDRHTGQC 1119

Query: 339  KRISQDKEASYFDPVWSPQGDLIA 362
             +         F   +S     +A
Sbjct: 1120 LQTLVGHADGIFTVAFSSFNQTLA 1143


>gi|186680797|ref|YP_001863993.1| hypothetical protein Npun_R0265 [Nostoc punctiforme PCC 73102]
 gi|186463249|gb|ACC79050.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 581

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 70/196 (35%), Gaps = 12/196 (6%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            ++ VSG    +L + D    N+          +     +P+ +K    + D      + 
Sbjct: 394 RQTAVSGSADTTLKLWDLQTGNVISTLSGHKDSVTAVAITPDGKKAVSGSADT----TLK 449

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTN 299
           L D +  +A   +   +  + A   + +GK+  +S   D  + ++  DLQ+  A   L+ 
Sbjct: 450 LWDLQTGKAISTLSGHKDSVTAVAITPDGKK-AVSGSADTTLKLW--DLQTEKAISTLSG 506

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 + + +PD  + V  S       L +           +   E+S +    SP G 
Sbjct: 507 HKDSVTAVAITPDGQKAVSSST---DTTLKLWDLETGKVIS-TFTGESSIYCCTVSPDGL 562

Query: 360 LIAFTKFSGEKFAIGV 375
                + SG    + +
Sbjct: 563 TFLIGEHSGRVHFLHL 578



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 73/252 (28%), Gaps = 23/252 (9%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE------DILRVYL 241
            + N+L +               +  +     +P+ Q    A+ D+        +  + L
Sbjct: 225 SVSNNLKLWSLKTGKEISTLTGHNNSINSVAITPDGQTAVSASSDNTLKLWTLKLWTLKL 284

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNT 300
            +    R    +   R ++ A   + +GK+  +SV  +  +     +L++      LT  
Sbjct: 285 WNVETRRETFTLRGHRGLVNAVAITPDGKK-AVSVSNNLKLW----NLKTGWQISTLTGH 339

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                + + +PD  + V  S       L +            +    S       P    
Sbjct: 340 KDSINAVAITPDGQKAVSASS---DTNLKLWDLETGKAISTLRGHTDSVNAVAIIPD-RQ 395

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKL 418
            A +  +     +             +        A   +P G+    +     DT  KL
Sbjct: 396 TAVSGSADTTLKLW--DLQTGNVISTLSGHKDSVTAVAITPDGKK---AVSGSADTTLKL 450

Query: 419 YSIDLNGRNETL 430
           + +       TL
Sbjct: 451 WDLQTGKAISTL 462



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 11/134 (8%)

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            N    LT         + + D    V  SD      L V       +       +AS  
Sbjct: 156 GNLLRTLTGHKASVNVVAITSDGQTAVSTSD---DNTLKVWDLQTGKETFTLSGHQASVN 212

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
               +P G  I     + + +++    K G +   L   ++++ +   +P G++   +  
Sbjct: 213 AVAITPDGQTIISVSNNLKLWSL----KTGKEISTLTGHNNSINSVAITPDGQT---AVS 265

Query: 410 KDGDTGSKLYSIDL 423
              D   KL+++ L
Sbjct: 266 ASSDNTLKLWTLKL 279


>gi|332668263|ref|YP_004451051.1| WD40 repeat-containing protein [Haliscomenobacter hydrossis DSM 1100]
 gi|332337077|gb|AEE54178.1| WD40 repeat-containing protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 1295

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 80/195 (41%), Gaps = 19/195 (9%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FS N + +       ED ++V  +D    +          + L+  FS + ++ L +  +
Sbjct: 929  FSNNGKNLLIV----EDYVKVRSIDLESGQIMNLFEEHSGI-LSLAFSIDDEKIL-TGSE 982

Query: 279  DEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++  D+++   E+L  N      S ++SPD  +I+  S+        +       
Sbjct: 983  DGIVKLW--DVKTKQLEKLFENHTDPVNSVAFSPDGRKILTGSE---DSSAILWDIETKK 1037

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAP 395
             ++    K +  +   +SP G  IA    +G +    +   +        +   +++ + 
Sbjct: 1038 VEKKFFHKNSPVYSVAFSPDGKQIA----TGGRRIATLWDLESGFAMQDFIGHKNDIHSV 1093

Query: 396  TWSPSGRSLI-FSRK 409
            ++SP G++++ +S  
Sbjct: 1094 SFSPDGKNILTYSTD 1108



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 91/271 (33%), Gaps = 35/271 (12%)

Query: 130  LWDVKDRKQIIGKKFFSSPASW-----RKIAHTISDDIYQSIT-----GEKGDFNSRILF 179
            LW++   + +   ++     +       K    I+DD+   +       E   FNS  + 
Sbjct: 860  LWEIGTGQGMTLFEYNKPTNAAIVSPNEKYLLVITDDLEIELFTITIENESITFNSIGII 919

Query: 180  ----VSESVVSGIIKNSLCVMDR--------DGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                V+ +V S   KN L V D         +   I  L      IL    FS + +K+ 
Sbjct: 920  SGGLVTSNVFSNNGKNLLIVEDYVKVRSIDLESGQIMNLFEEHSGILSL-AFSIDDEKIL 978

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D      V L D +  +  K   N    + +  FS +G++ L +  +D +  ++  
Sbjct: 979  TGSEDG----IVKLWDVKTKQLEKLFENHTDPVNSVAFSPDGRKIL-TGSEDSSAILW-- 1031

Query: 288  DLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D+++    ++  +      S ++SPD  QI       G+    +         +     +
Sbjct: 1032 DIETKKVEKKFFHKNSPVYSVAFSPDGKQIA----TGGRRIATLWDLESGFAMQDFIGHK 1087

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                   +SP G  I                
Sbjct: 1088 NDIHSVSFSPDGKNILTYSTDNTAILWRTYD 1118



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 85/235 (36%), Gaps = 30/235 (12%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    D  +    FSP+  K+              L D +  +  +      + I A  F
Sbjct: 497 VFQGFDDTILALAFSPDSTKI----LTGSGNAIATLWDIKTGKCEQLFIQHTASIWAAIF 552

Query: 266 SSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISA----SYSPDSSQIVFES 320
           S +GK+ L       A  I  + D+++   E++      +       ++SP+ + I+   
Sbjct: 553 SPDGKKIL----TGGADQIAILWDIETGKAEKIFENE--HTKPIYALAFSPNGANIL-TG 605

Query: 321 DREGKEQLYVM-----------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            ++G  +L+ +                + +   +++        ++P+G  I    ++G 
Sbjct: 606 SKDGTVKLWNIETGKIEKTFNDNIEKDNMEEEQEEEIDEISSIAFTPEGTQILTGNWNGT 665

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                +  +D    +L    S + +  + P G S++ +   DG    K   ID N
Sbjct: 666 AKVWSIEHEDKFSFKL--SQSAISSVAFLPDGDSIL-AGYDDGRLLLKEIDIDSN 717



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 81/202 (40%), Gaps = 11/202 (5%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SPN++ +   T D E  L    ++               ++ +  FS+NGK  LI    +
Sbjct: 884  SPNEKYLLVITDDLEIELFTITIENESITFNSIGIISGGLVTSNVFSNNGKNLLIV---E 940

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + + + S+DL+S     L       +S ++S D  +I+     +G  +L+         +
Sbjct: 941  DYVKVRSIDLESGQIMNLFEEHSGILSLAFSIDDEKIL-TGSEDGIVKLW--DVKTKQLE 997

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            ++ ++         +SP G  I  T        +  ++    +++   ++S + +  +SP
Sbjct: 998  KLFENHTDPVNSVAFSPDGRKIL-TGSEDSSAILWDIETKKVEKKFFHKNSPVYSVAFSP 1056

Query: 400  SGRSLIFSRKKDGDTGSKLYSI 421
             G+ +       G   + L+ +
Sbjct: 1057 DGKQIA----TGGRRIATLWDL 1074



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 93/269 (34%), Gaps = 34/269 (12%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVS-----GIIKNSLCVMDRDGANIRYLTPSRDQ 212
           ISD      +     F+  IL ++ S  S     G       + D        L      
Sbjct: 486 ISDPQIAFYSKVFQGFDDTILALAFSPDSTKILTGSGNAIATLWDIKTGKCEQLFIQHTA 545

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-FRSMILAPRFSSNGKR 271
            ++   FSP+ +K+              L D    +A K   N     I A  FS NG  
Sbjct: 546 SIWAAIFSPDGKKI----LTGGADQIAILWDIETGKAEKIFENEHTKPIYALAFSPNGAN 601

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---------------ISASYSPDSSQI 316
            L +  KD  + ++  ++++   E+ T    I                 S +++P+ +QI
Sbjct: 602 IL-TGSKDGTVKLW--NIETGKIEK-TFNDNIEKDNMEEEQEEEIDEISSIAFTPEGTQI 657

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +   +  G  +++ ++       ++SQ   ++     + P GD I    +   +  +  +
Sbjct: 658 L-TGNWNGTAKVWSIEHEDKFSFKLSQ---SAISSVAFLPDGDSIL-AGYDDGRLLLKEI 712

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             D +   +      +     SP  +++ 
Sbjct: 713 DIDSNTVIITAHSDAIYHIAVSPYDKAVA 741



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 13/158 (8%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              +  + D +I    K    F   ILA  FS +  + L +   +    ++  D+++   
Sbjct: 480 SAFKKMISDPQIAFYSKVFQGFDDTILALAFSPDSTKIL-TGSGNAIATLW--DIKTGKC 536

Query: 295 ERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYV-MQSNGSDQKRISQDKEA-SYFD 351
           E+L         +A +SPD  +I+      G +Q+ +         ++I +++     + 
Sbjct: 537 EQLFIQHTASIWAAIFSPDGKKIL----TGGADQIAILWDIETGKAEKIFENEHTKPIYA 592

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
             +SP G  I      G    + +   +  +      D
Sbjct: 593 LAFSPNGANILTGSKDGT---VKLWNIETGKIEKTFND 627



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 22/163 (13%), Positives = 56/163 (34%), Gaps = 22/163 (13%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-----ISASYSP 311
              + A  FS +GK+   +   D  + ++         E L    F        S+ +  
Sbjct: 793 WGRVNAVAFSPDGKQIA-TGGDDGTVKVW-------GVENLRIEEFYRYEEEITSSVFFQ 844

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           + ++++  S REG+  L+ +   G+ Q     +        + SP    +        + 
Sbjct: 845 NGTKVLTTS-REGRVILWEI---GTGQGMTLFEYNKPTNAAIVSPNEKYLLVIT-DDLEI 899

Query: 372 AIGVMKKDGSQERL----LVEDSNLQAPTWSPSGRSLIFSRKK 410
            +  +  +          ++    + +  +S +G++L+     
Sbjct: 900 ELFTITIENESITFNSIGIISGGLVTSNVFSNNGKNLLIVEDY 942


>gi|290959723|ref|YP_003490905.1| peptidase [Streptomyces scabiei 87.22]
 gi|260649249|emb|CBG72363.1| putative peptidase [Streptomyces scabiei 87.22]
          Length = 1125

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 89/265 (33%), Gaps = 28/265 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +   DG++  +        +  PRFSP+ + +AY ++       ++L         +
Sbjct: 51  DLWLAPLDGSDRAWRLTVDRTKVACPRFSPDGRHIAYTSWR-SITPEIHLTPVDGGAPAR 109

Query: 252 RIGNFRSMILAPR-FSS---NGKRALISVQKDEAM-----DIYSVDLQSNATERLTNTLF 302
           R+ ++ S     R ++    +G+  +++V             Y V    +   +L     
Sbjct: 110 RLTHWGSPDTEVRGWTPPNRHGRSDILAVASHGEPFSYFTWAYKVRTDGDPGRKLPWGPV 169

Query: 303 INI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK------RISQDKEASYFDPVWS 355
            +I SA    +   ++       +   +     G+  +      R+  + E     PV+ 
Sbjct: 170 SDIQSAEIDGERRTLLLTGTPPHEPASWKRYRGGATGRLWLHGERLLAELEGHLHSPVFV 229

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             G  IAF         +     DGS  R   +     A   S  G  +++         
Sbjct: 230 --GGRIAFLSDHEGVGNLYSCAYDGSDLRRHTDHDAFYARHASSDGTRVVY------QCA 281

Query: 416 SKLYSID---LNGRNETLINTPAYA 437
            +L+ +D    + R   L  T   A
Sbjct: 282 GELWIVDDLAPDARPRRLDVTLGGA 306



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 76/227 (33%), Gaps = 27/227 (11%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  ++ +   DD     ++L          R+   R+ +  PRFS +G+    +  +   
Sbjct: 40  SGDRLCFVAEDD-----LWLAPLDGSDRAWRLTVDRTKVACPRFSPDGRHIAYTSWRSIT 94

Query: 282 MDIYSVDLQSNAT-ERLTNTLFINISAS-YSP---DSSQIVFESDREGKEQ-----LYVM 331
            +I+   +   A   RLT+    +     ++P        +      G+        Y +
Sbjct: 95  PEIHLTPVDGGAPARRLTHWGSPDTEVRGWTPPNRHGRSDILAVASHGEPFSYFTWAYKV 154

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-- 389
           +++G   +++     +         +   +  T     + A     + G+  RL +    
Sbjct: 155 RTDGDPGRKLPWGPVSDIQSAEIDGERRTLLLTGTPPHEPASWKRYRGGATGRLWLHGER 214

Query: 390 ------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                  +L +P +   G  + F    +G     LYS   +G +   
Sbjct: 215 LLAELEGHLHSPVFV--GGRIAFLSDHEG--VGNLYSCAYDGSDLRR 257



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 72/212 (33%), Gaps = 14/212 (6%)

Query: 242 MDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNA--TER 296
             T  D   + I +   + +  P    +G R       D   A++I  +   +      R
Sbjct: 343 WLTHRDGPARTIADTPGVRVRLPEMLGSGGRVAYVTDADGEDAVEIAHLPRATGERAPRR 402

Query: 297 LTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           L +      +     P   ++   +       L   + +  +   +         D  +S
Sbjct: 403 LVSGGLGRVLELVADPSGERLAIAAHDGRVLLLDTTEESDGEVTELIASLNGPVRDLAFS 462

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKD 411
           P G  + ++   G   ++  +K    ++RL+V+        + P ++  GR L F   + 
Sbjct: 463 PDGAWLTWSH-PGIGRSLRQIKMARIKDRLVVDVTSGRFEDENPVFTRDGRYLAFLSWRG 521

Query: 412 GDTGSKLYSIDLN---GRNETLINTPAYASDP 440
            D    +++ DL+   G    L+   +    P
Sbjct: 522 FDPVYDVHTGDLSFPLGCRPYLLPLSSATPSP 553



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 13/127 (10%)

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           DRE   +    ++ G +Q R +         P  S  GD + F         + +   DG
Sbjct: 10  DREHTPE----RATGREQARQAGPDVGYLRHPHLS--GDRLCFVAEDD----LWLAPLDG 59

Query: 381 SQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           S    RL V+ + +  P +SP GR + ++  +       L  +D       L +  +  +
Sbjct: 60  SDRAWRLTVDRTKVACPRFSPDGRHIAYTSWRSITPEIHLTPVDGGAPARRLTHWGSPDT 119

Query: 439 DPQ-WVG 444
           + + W  
Sbjct: 120 EVRGWTP 126



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 6/126 (4%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           + DG  +  L  S +  + +  FSP+   + ++       LR   M    DR    + + 
Sbjct: 440 ESDGE-VTELIASLNGPVRDLAFSPDGAWLTWSHPGIGRSLRQIKMARIKDRLVVDVTSG 498

Query: 257 RSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQ---SNATERLTNTLFINISASYSP 311
           R     P F+ +G+       +  D   D+++ DL          L  +       + +P
Sbjct: 499 RFEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLLPLSSATPSPFALNP 558

Query: 312 DSSQIV 317
           D   + 
Sbjct: 559 DGRPVA 564


>gi|254421472|ref|ZP_05035190.1| hypothetical protein S7335_1622 [Synechococcus sp. PCC 7335]
 gi|196188961|gb|EDX83925.1| hypothetical protein S7335_1622 [Synechococcus sp. PCC 7335]
          Length = 1208

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 81/267 (30%), Gaps = 48/267 (17%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD------------- 233
           G + +++ +         +        +F   F+P+ +     + D              
Sbjct: 592 GDLHSNIHLFQVGSYRHLHTLKGHTDSVFAISFTPDGKYFVSCSGDTTLKLWRVSNYECI 651

Query: 234 -------------------------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                                         V + D +     + +    S I    FS  
Sbjct: 652 RTFEGHQNLVKSAVFSPNGQAIASGGSDNSVKIWDWQTGACLRTLEGHTSAIRTVAFSPT 711

Query: 269 GKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           G++   S   D  + ++  + QS     RL +      S +++PD  ++V      G +Q
Sbjct: 712 GEKLA-SASLDHTIRLW--NWQSGECIRRLEDHNQGVWSVAFTPDGERLV----SGGIDQ 764

Query: 328 -LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + V  +       +    ++S +  + SP G  IA +        I  +     ++ L+
Sbjct: 765 TVRVWDAQTGKCLNVLSGHQSSVWSTIISPDGQYIA-SGAQAGMIKIWHLPSGRCEKSLV 823

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                  A  +S  G+ L     KD  
Sbjct: 824 GHKGWTWALVFSNDGKRLYSGSYKDST 850



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 11/190 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   NS+ + D                +    FSP  +K+A A+ D      + L + +
Sbjct: 675 SGGSDNSVKIWDWQTGACLRTLEGHTSAIRTVAFSPTGEKLASASLDH----TIRLWNWQ 730

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
                +R+ +    + +  F+ +G+R + S   D+ + ++  D Q+      L+      
Sbjct: 731 SGECIRRLEDHNQGVWSVAFTPDGERLV-SGGIDQTVRVW--DAQTGKCLNVLSGHQSSV 787

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S   SPD   I   +       + +        ++     +   +  V+S  G  +   
Sbjct: 788 WSTIISPDGQYIASGAQAG---MIKIWHLPSGRCEKSLVGHKGWTWALVFSNDGKRLYSG 844

Query: 365 KFSGEKFAIG 374
            +      I 
Sbjct: 845 SYKDSTVRIW 854



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 4/118 (3%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +G ++       E +VSG I  ++ V D        +       ++    SP+ Q +A
Sbjct: 741 HNQGVWSVAFTPDGERLVSGGIDQTVRVWDAQTGKCLNVLSGHQSSVWSTIISPDGQYIA 800

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                      + +      R  K +   +    A  FS++GKR      KD  + I+
Sbjct: 801 ----SGAQAGMIKIWHLPSGRCEKSLVGHKGWTWALVFSNDGKRLYSGSYKDSTVRIW 854



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 19/204 (9%)

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            R  +R+      + A  F  +G     S  +D+ +  +++       + L     +  S 
Sbjct: 956  RFERRLAGHTRAVYAVDFHPSGDWLA-SAAEDQTVRFWNL-ADGACLKTLKAHDEMIWSV 1013

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            ++S D   +      +   +L+   +   +   +        F  V+SP   LIA T   
Sbjct: 1014 TFSHDGRLLA-TGSYDHTAKLW--DAETGECVAVLSGHTDQVFSVVFSPDDALIASTSSD 1070

Query: 368  GEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSL--IFSRKKDGDTGSKLYSI--- 421
            G      V    G   + L   +  + + T+ P G     IF      D+  K++++   
Sbjct: 1071 GSIKIWAVQ--TGQCLKTLTGHNGFVCSGTFYPLGDRADPIFVSG-GFDSQIKVWAVESG 1127

Query: 422  ----DLNGRNETLINTPAYASDPQ 441
                 L G  +T+ +  A+++D Q
Sbjct: 1128 QCLQTLQGHTQTVWSL-AFSADGQ 1150


>gi|326937954|gb|AEA13850.1| acylamino-acid-releasing protein [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 654

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 108/292 (36%), Gaps = 54/292 (18%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----- 234
           ++     G  KN + V   DG +   +T  ++ I    ++ P  +   Y     E     
Sbjct: 82  IAYLSPVGDGKNQIFVKSLDGYSEVQITDEKEGISTF-KWDPAGKGFYYVAQSKECEEIK 140

Query: 235 ------------------------DILRVYLMDTRI--DRAPKRIGNFRS-MILAPRFSS 267
                                    I +V   DT    +R   R+ + +   I     S+
Sbjct: 141 KRKELYGDFHHVSKEHQNNCLYYIKIEKVIQSDTDEHENRVVYRLTDGKDFHIHEFDISN 200

Query: 268 NGKRALISVQKDEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ES 320
           +GK+ +        M      D+Y + +++   + L     +  S  +SPD S+I +  S
Sbjct: 201 DGKKVVFMATPSSNMADYINGDLYILHIKAGELQNLNVDKLLGGSVCFSPDGSKICYPAS 260

Query: 321 DREGKE--------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            RE            L +   +  +  +   D +++     W+ +G  I     +   + 
Sbjct: 261 IRERDYYRNYIQDSTLEIYDIHNGELIQPLTDFDSTVMPLQWTAKG--ILIRWQNKTNYL 318

Query: 373 IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           IG++ +DG+ E +L E  D  +   + +  G+ + +++ +  +T  ++Y  D
Sbjct: 319 IGLLAEDGTVE-ILSEKVDGFIMDASITKDGKHISYNKARTNET-FEIYLDD 368



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 65/195 (33%), Gaps = 43/195 (22%)

Query: 266 SSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GK      +  +  D      ++  +     +  L+N    +    +SPD+  I + 
Sbjct: 26  SDDGKNVAFVKKTADWKDNTYRNHVWIYEKDKKQSYPLSNGDIDSTHPLWSPDAKCIAYL 85

Query: 320 SDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----------- 367
           S   +GK Q++V   +G  + +I+ +KE       W P G    +   S           
Sbjct: 86  SPVGDGKNQIFVKSLDGYSEVQITDEKEGISTFK-WDPAGKGFYYVAQSKECEEIKKRKE 144

Query: 368 --GEKFAIG---------------VMKKDGSQ-----ERLLVE--DSNLQAPTWSPSGRS 403
             G+   +                V++ D  +        L +  D ++     S  G+ 
Sbjct: 145 LYGDFHHVSKEHQNNCLYYIKIEKVIQSDTDEHENRVVYRLTDGKDFHIHEFDISNDGKK 204

Query: 404 LIFSRKKDGDTGSKL 418
           ++F      +    +
Sbjct: 205 VVFMATPSSNMADYI 219



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++ + +      +S + +     P+WSP   
Sbjct: 22  STNISDDGKNVAFVKKTADWKDNTYRNHVWIYEKDKKQSYPLS-NGDIDSTHPLWSPDAK 80

Query: 360 LIAFTKFSG-EKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G  K  I V   DG S+ ++  E   +    W P+G+   +  + 
Sbjct: 81  CIAYLSPVGDGKNQIFVKSLDGYSEVQITDEKEGISTFKWDPAGKGFYYVAQS 133



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 40/266 (15%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++        +N + + ++D     Y   + D     P +SP+ + +AY +    
Sbjct: 32  VAFVKKTADWKDNTYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDAKCIAYLS-PVG 89

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D      + +    +  +I + +  I   ++   GK      Q  E  +I          
Sbjct: 90  DGKNQIFVKSLDGYSEVQITDEKEGISTFKWDPAGKGFYYVAQSKECEEI-------KKR 142

Query: 295 ERLTNTLFINISASYSPDSS---------QIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           + L            S +           + V +SD +  E   V         R++  K
Sbjct: 143 KEL-----YGDFHHVSKEHQNNCLYYIKIEKVIQSDTDEHENRVVY--------RLTDGK 189

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWS 398
           +    +   S  G  + F               + ++     + + L V+     +  +S
Sbjct: 190 DFHIHEFDISNDGKKVVFMATPSSNMADYINGDLYILHIKAGELQNLNVDKLLGGSVCFS 249

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLN 424
           P G  + +          + Y  D  
Sbjct: 250 PDGSKICYPASIRERDYYRNYIQDST 275



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 86/260 (33%), Gaps = 32/260 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMI 260
            LT  +D  + E   S + +KV +      ++      D  I        + +   + + 
Sbjct: 184 RLTDGKDFHIHEFDISNDGKKVVFMATPSSNMADYINGDLYILHIKAGELQNLNVDKLLG 243

Query: 261 LAPRFSSNGKRALI--SVQKDEAMDIY-------SVDLQSNATER-LTNTLFINISASYS 310
            +  FS +G +     S+++ +    Y         D+ +    + LT+     +   ++
Sbjct: 244 GSVCFSPDGSKICYPASIRERDYYRNYIQDSTLEIYDIHNGELIQPLTDFDSTVMPLQWT 303

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGE 369
                 +    +     L  + +     + +S+  +    D   +  G  I++ K  + E
Sbjct: 304 AKG---ILIRWQNKTNYLIGLLAEDGTVEILSEKVDGFIMDASITKDGKHISYNKARTNE 360

Query: 370 KFAIGVMKKDGSQERLLVED---SNLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            F I +  K  + E    +    SN +  +W S  G  +           S     D+N 
Sbjct: 361 TFEIYLDDKKITDENRFFKGKLKSNREIISWKSSDGLEI-------EGVISTPVEFDINK 413

Query: 426 RNETLINTPAYASDPQWVGF 445
           +   L+        P W  F
Sbjct: 414 KYPLLVVIHGG---PAWASF 430


>gi|307324269|ref|ZP_07603477.1| peptidase S41 [Streptomyces violaceusniger Tu 4113]
 gi|306890000|gb|EFN20978.1| peptidase S41 [Streptomyces violaceusniger Tu 4113]
          Length = 1120

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 60/180 (33%), Gaps = 26/180 (14%)

Query: 269 GKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           G     + + D  +   +  D  +    RLT        A +SPD SQI F + R    +
Sbjct: 23  GDLLCFAAEDDLWVAPLTAPDGPTGRAWRLTVDRTRVGPARFSPDGSQIAFTTWRSLDPE 82

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSP---QG-DLIAFTKFSGEKFAIGVMKKDGSQE 383
           +Y++ + G   +R++           W+P    G   I       + F+           
Sbjct: 83  IYLVPAAGGPARRLTYWGSTDAQVCGWTPPDQDGVSQILAVSSHEQPFSHFSW-----AY 137

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-W 442
            L  +         SP GR             + +   DL+G   TL+ T     +P  W
Sbjct: 138 TLPTDG--------SPGGRL-------PWGPVADIAVADLDGERRTLLLTGKPPHEPATW 182



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 59/170 (34%), Gaps = 26/170 (15%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+   R+ +   RFS +G +   +  +    +IY V        RLT     +     ++
Sbjct: 51  RLTVDRTRVGPARFSPDGSQIAFTTWRSLDPEIYLVPAAGGPARRLTYWGSTDAQVCGWT 110

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P         D++G  Q+  +    S ++  S    A       SP G L       G  
Sbjct: 111 PP--------DQDGVSQILAVS---SHEQPFSHFSWAYTLPTDGSPGGRL-----PWGPV 154

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             I V   DG +  LL+       P          + R + G TG +L+ 
Sbjct: 155 ADIAVADLDGERRTLLLTGKPPHEPA--------TWKRYRGGATG-RLWL 195



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 67/184 (36%), Gaps = 14/184 (7%)

Query: 269 GKRALIS-VQKDEAMDIYSVDLQSN--ATERLTNTL-FINISASYSPDSSQIVFESDREG 324
           G+ A ++  + ++A++I  +   S      RL   L         SPD   +   +  +G
Sbjct: 357 GRVAYLTDAEGEDAIEIAQLPRASGPGEPRRLAAGLLGRVHELESSPDGDLLAVAAG-DG 415

Query: 325 KEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKD 379
           +  L    ++G  +   + +       D  +SP    +A++      +     I  +  D
Sbjct: 416 RLLLVDTSADGDGEVTELIRSDNGPVGDLAFSPDSAWLAWSHPGIGRTLRSIKIARL-AD 474

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAY 436
            +   +       + P ++  GR L F   +  D    +++ DL+   G    L+   + 
Sbjct: 475 RTIVDVTNGRFEDEEPVFTSDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSA 534

Query: 437 ASDP 440
              P
Sbjct: 535 TPSP 538



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 55/192 (28%), Gaps = 7/192 (3%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             R+ +++++     I+ +           R L       + E   SP+   +A     D
Sbjct: 356 TGRVAYLTDAEGEDAIEIAQLPRASGPGEPRRLAAGLLGRVHELESSPDGDLLA-VAAGD 414

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM--DIYSVDLQS 291
             +L V           + I +    +    FS +      S          I    L  
Sbjct: 415 GRLLLVDTSADGDGEVTELIRSDNGPVGDLAFSPDSAWLAWSHPGIGRTLRSIKIARLAD 474

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV----MQSNGSDQKRISQDKEA 347
                +TN  F +    ++ D   + F S R       V    +      +  +     A
Sbjct: 475 RTIVDVTNGRFEDEEPVFTSDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSA 534

Query: 348 SYFDPVWSPQGD 359
           +      SP+G 
Sbjct: 535 TPSPFALSPEGR 546



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 12/158 (7%)

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           +I      S P   R++A  +   +++  +   GD          +V +G  +  L    
Sbjct: 372 EIAQLPRASGPGEPRRLAAGLLGRVHELESSPDGD--------LLAVAAGDGRLLLVDTS 423

Query: 198 RDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
            DG   +  L  S +  + +  FSP+   +A++       LR   +    DR    + N 
Sbjct: 424 ADGDGEVTELIRSDNGPVGDLAFSPDSAWLAWSHPGIGRTLRSIKIARLADRTIVDVTNG 483

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           R     P F+S+G+       +         D+ +   
Sbjct: 484 RFEDEEPVFTSDGRYLAFLSWRGFDP---VYDVHTGDL 518


>gi|228937462|ref|ZP_04100107.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228970349|ref|ZP_04131007.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228976919|ref|ZP_04137330.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis Bt407]
 gi|228782804|gb|EEM30971.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis Bt407]
 gi|228789373|gb|EEM37294.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228822212|gb|EEM68195.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           berliner ATCC 10792]
          Length = 662

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 108/292 (36%), Gaps = 54/292 (18%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----- 234
           ++     G  KN + V   DG +   +T  ++ I    ++ P  +   Y     E     
Sbjct: 90  IAYLSPVGDGKNQIFVKSLDGYSEVQITDEKEGISTF-KWDPAGKGFYYVAQSKECEEIK 148

Query: 235 ------------------------DILRVYLMDTRI--DRAPKRIGNFRS-MILAPRFSS 267
                                    I +V   DT    +R   R+ + +   I     S+
Sbjct: 149 KRKELYGDFHHVSKEHQNNCLYYIKIEKVIQSDTDEHENRVVYRLTDGKDFHIHEFDISN 208

Query: 268 NGKRALISVQKDEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ES 320
           +GK+ +        M      D+Y + +++   + L     +  S  +SPD S+I +  S
Sbjct: 209 DGKKVVFMATPSSNMADYINGDLYILHIKAGELQNLNVDKLLGGSVCFSPDGSKICYPAS 268

Query: 321 DREGKE--------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            RE            L +   +  +  +   D +++     W+ +G  I     +   + 
Sbjct: 269 IRERDYYRNYIQDSTLEIYDIHNGELIQPLTDFDSTVMPLQWTAKG--ILIRWQNKTNYL 326

Query: 373 IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           IG++ +DG+ E +L E  D  +   + +  G+ + +++ +  +T  ++Y  D
Sbjct: 327 IGLLAEDGTVE-ILSEKVDGFIMDASITKDGKHISYNKARTNET-FEIYLDD 376



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 65/195 (33%), Gaps = 43/195 (22%)

Query: 266 SSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GK      +  +  D      ++  +     +  L+N    +    +SPD+  I + 
Sbjct: 34  SDDGKNVAFVKKTADWKDNTYRNHVWIYEKDKKQSYPLSNGDIDSTHPLWSPDAKCIAYL 93

Query: 320 SDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----------- 367
           S   +GK Q++V   +G  + +I+ +KE       W P G    +   S           
Sbjct: 94  SPVGDGKNQIFVKSLDGYSEVQITDEKEGISTFK-WDPAGKGFYYVAQSKECEEIKKRKE 152

Query: 368 --GEKFAIG---------------VMKKDGSQ-----ERLLVE--DSNLQAPTWSPSGRS 403
             G+   +                V++ D  +        L +  D ++     S  G+ 
Sbjct: 153 LYGDFHHVSKEHQNNCLYYIKIEKVIQSDTDEHENRVVYRLTDGKDFHIHEFDISNDGKK 212

Query: 404 LIFSRKKDGDTGSKL 418
           ++F      +    +
Sbjct: 213 VVFMATPSSNMADYI 227



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++ + +      +S + +     P+WSP   
Sbjct: 30  STNISDDGKNVAFVKKTADWKDNTYRNHVWIYEKDKKQSYPLS-NGDIDSTHPLWSPDAK 88

Query: 360 LIAFTKFSG-EKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G  K  I V   DG S+ ++  E   +    W P+G+   +  + 
Sbjct: 89  CIAYLSPVGDGKNQIFVKSLDGYSEVQITDEKEGISTFKWDPAGKGFYYVAQS 141



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 40/266 (15%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++        +N + + ++D     Y   + D     P +SP+ + +AY +    
Sbjct: 40  VAFVKKTADWKDNTYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDAKCIAYLS-PVG 97

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D      + +    +  +I + +  I   ++   GK      Q  E  +I          
Sbjct: 98  DGKNQIFVKSLDGYSEVQITDEKEGISTFKWDPAGKGFYYVAQSKECEEI-------KKR 150

Query: 295 ERLTNTLFINISASYSPDSS---------QIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           + L            S +           + V +SD +  E   V         R++  K
Sbjct: 151 KEL-----YGDFHHVSKEHQNNCLYYIKIEKVIQSDTDEHENRVVY--------RLTDGK 197

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWS 398
           +    +   S  G  + F               + ++     + + L V+     +  +S
Sbjct: 198 DFHIHEFDISNDGKKVVFMATPSSNMADYINGDLYILHIKAGELQNLNVDKLLGGSVCFS 257

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLN 424
           P G  + +          + Y  D  
Sbjct: 258 PDGSKICYPASIRERDYYRNYIQDST 283



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 86/260 (33%), Gaps = 32/260 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMI 260
            LT  +D  + E   S + +KV +      ++      D  I        + +   + + 
Sbjct: 192 RLTDGKDFHIHEFDISNDGKKVVFMATPSSNMADYINGDLYILHIKAGELQNLNVDKLLG 251

Query: 261 LAPRFSSNGKRALI--SVQKDEAMDIY-------SVDLQSNATER-LTNTLFINISASYS 310
            +  FS +G +     S+++ +    Y         D+ +    + LT+     +   ++
Sbjct: 252 GSVCFSPDGSKICYPASIRERDYYRNYIQDSTLEIYDIHNGELIQPLTDFDSTVMPLQWT 311

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGE 369
                 +    +     L  + +     + +S+  +    D   +  G  I++ K  + E
Sbjct: 312 AKG---ILIRWQNKTNYLIGLLAEDGTVEILSEKVDGFIMDASITKDGKHISYNKARTNE 368

Query: 370 KFAIGVMKKDGSQERLLVED---SNLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            F I +  K  + E    +    SN +  +W S  G  +           S     D+N 
Sbjct: 369 TFEIYLDDKKITDENRFFKGKLKSNREIISWKSSDGLEI-------EGVISTPVEFDINK 421

Query: 426 RNETLINTPAYASDPQWVGF 445
           +   L+        P W  F
Sbjct: 422 KYPLLVVIHGG---PAWASF 438


>gi|160903198|ref|YP_001568779.1| peptidase S41 [Petrotoga mobilis SJ95]
 gi|160360842|gb|ABX32456.1| peptidase S41 [Petrotoga mobilis SJ95]
          Length = 1065

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 65/188 (34%), Gaps = 22/188 (11%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +     + D    I+ V        RLT  +      ++S D   I F    EG   +Y
Sbjct: 17  DQIAFVAEDD----IWVVPSSGGIARRLTTNVGEISDLTFSEDGKWIAFTGRDEGVPDVY 72

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKK-DGSQER 384
           ++ S G    R++    A+     W   G  I F+    + F     +  +   D  + +
Sbjct: 73  IIPSIGGVPIRLTYLG-ANSKVLCWH-NGK-IIFSSNYVQPFKRITSLWEVDVEDKRKLK 129

Query: 385 LLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            L +       ++      ++         + + + G  G  L  ++ N     LI+  +
Sbjct: 130 QL-DFGICTEISFGKEKGVVLGRKTGDPARWKKYRGGTAGELLIDLEGNYNFRKLIDLKS 188

Query: 436 YASDPQWV 443
             ++P W+
Sbjct: 189 NFANPIWI 196



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 81/229 (35%), Gaps = 27/229 (11%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +     P    +Q  +A+   DD        +        +R+      I    FS +GK
Sbjct: 6   NGYYRFPTIYNDQ--IAFVAEDD------IWVVPSSGGIARRLTTNVGEISDLTFSEDGK 57

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--REGKEQL 328
               + + +   D+Y +        RLT     +    +   + +I+F S+  +  K   
Sbjct: 58  WIAFTGRDEGVPDVYIIPSIGGVPIRLTYLGANSKVLCW--HNGKIIFSSNYVQPFKRIT 115

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA---------FTKFSGEKFAIGVMKKD 379
            + + +  D++++ Q       +  +  +  ++          + K+ G      ++  +
Sbjct: 116 SLWEVDVEDKRKLKQLDFGICTEISFGKEKGVVLGRKTGDPARWKKYRGGTAGELLIDLE 175

Query: 380 GS-QERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           G+   R L++  SN   P W      + F    D    + +YS  + G+
Sbjct: 176 GNYNFRKLIDLKSNFANPIWIQD--RIYFISDHDD--VANIYSCTVEGK 220



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 65/177 (36%), Gaps = 10/177 (5%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY--SPDSSQIVFESDREGKEQL 328
           +A+    ++    I   DL++    +      +    +   SP   +I+  + R    +L
Sbjct: 340 KAVTISDENNYEHIEVYDLKTGNLIKKVEEYDLGRVMNIVASPKDEEILLTNQR---NEL 396

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLV 387
            ++      +  + +          +SP G  IA++KF + ++ AI +  K+  +   + 
Sbjct: 397 ILIDLRNHKKIDVDKSTFGPINGYSFSPDGRWIAYSKFINSKQAAIMIFDKEKEEVHQVT 456

Query: 388 EDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
           +       P + P G+ L F   +  +     + ++L    G    LI        P
Sbjct: 457 KPILFDVDPVFDPEGKYLYFLSYRIFNPIEDRFQMNLAFEKGTKPYLITLKKDICSP 513



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 10/133 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQK 278
           SP  +++      +E IL       +ID      G          FS +G+    S    
Sbjct: 381 SPKDEEILLTNQRNELILIDLRNHKKIDVDKSTFGPINGY----SFSPDGRWIAYSKFIN 436

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQS 333
            +   I   D +     ++T  +  ++   + P+   + F S R     E + Q+ +   
Sbjct: 437 SKQAAIMIFDKEKEEVHQVTKPILFDVDPVFDPEGKYLYFLSYRIFNPIEDRFQMNLAFE 496

Query: 334 NGSDQKRISQDKE 346
            G+    I+  K+
Sbjct: 497 KGTKPYLITLKKD 509



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 39/116 (33%), Gaps = 6/116 (5%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +N L ++D        +  S    +    FSP+ + +AY+ + +     + + D +  
Sbjct: 391 NQRNELILIDLRNHKKIDVDKSTFGPINGYSFSPDGRWIAYSKFINSKQAAIMIFD-KEK 449

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM--DIYSVDLQ---SNATERLT 298
               ++       + P F   GK       +      D + ++L          +T
Sbjct: 450 EEVHQVTKPILFDVDPVFDPEGKYLYFLSYRIFNPIEDRFQMNLAFEKGTKPYLIT 505



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 74/244 (30%), Gaps = 68/244 (27%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--------DILRVYLMD 243
            + V+   G   R LT +  +I     FS + + +A+   D+          I  V +  
Sbjct: 26  DIWVVPSSGGIARRLTTNVGEISDL-TFSEDGKWIAFTGRDEGVPDVYIIPSIGGVPIRL 84

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSN----------------------------------- 268
           T +    K +      I+   FSSN                                   
Sbjct: 85  TYLGANSKVLCWHNGKII---FSSNYVQPFKRITSLWEVDVEDKRKLKQLDFGICTEISF 141

Query: 269 GK-RALISVQKDEAMDIY-----------SVDLQSN-ATERLTNTLFINISASYSPDSSQ 315
           GK + ++  +K      +            +DL+ N    +L +      +  +  D  +
Sbjct: 142 GKEKGVVLGRKTGDPARWKKYRGGTAGELLIDLEGNYNFRKLIDLKSNFANPIWIQD--R 199

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           I F SD +    +Y     G D K+ +   +    +P     G  I +   S     I +
Sbjct: 200 IYFISDHDDVANIYSCTVEGKDLKKHTYHNDFYVRNPKS--DGKNIVYHAGSD----IYI 253

Query: 376 MKKD 379
           +   
Sbjct: 254 LNLS 257


>gi|330752749|emb|CBL88212.1| dipeptidylpeptidase IV, S9B family [uncultured Leeuwenhoekiella
           sp.]
          Length = 723

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/285 (16%), Positives = 107/285 (37%), Gaps = 38/285 (13%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA---T 230
           + R + +S ++ S   ++SL V      + + LT   ++ + EP FSP+  KVAY     
Sbjct: 100 DERKVLLSTNLRSIYRRSSLGVYYVYDLDTKKLTQVSEKSIQEPTFSPDASKVAYGLDNN 159

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNF---------RSMILAPRFSSNGKRALISVQKDEA 281
              +D+          D    +I N           S + A  ++++G +       +  
Sbjct: 160 LYIKDLASGATTQLTSDGETNKIINGITDWVYEEEFSFVRAFDWNADGTKIAFIRFDETN 219

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           +  +S+D+  +           +    Y                  L++     ++ K +
Sbjct: 220 VPEFSMDVFGSEL-----YPSKDTF-KYPKAGENNA-------SVGLHIYDLATAETKAV 266

Query: 342 SQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVEDSNL----- 392
                 +Y+ P   W+P  +++A    S ++  I ++  DG   + +L++ D +      
Sbjct: 267 DLSGFQNYYIPRLEWTPDANVLAVQTTSRKQNDINLIFVDGASGKAKLILSDKDDAYIDV 326

Query: 393 -QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
               T+       +++ +KDG   + +Y  D  G+ +  +    +
Sbjct: 327 TDNLTFL-DNNEFLWTSEKDG--WNHIYHYDKTGKLKNQVTKGNW 368



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/227 (11%), Positives = 81/227 (35%), Gaps = 27/227 (11%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPN--QQKVAYATYDDEDILR---------VYLMDT 244
            + DG  I ++   R      P FS +    ++ Y + D     +         +++ D 
Sbjct: 203 WNADGTKIAFI---RFDETNVPEFSMDVFGSEL-YPSKDTFKYPKAGENNASVGLHIYDL 258

Query: 245 RIDRAPKRIGNFRSMILAPR--FSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLT-- 298
                     +       PR  ++ +     +  + +K   +++  VD  S   + +   
Sbjct: 259 ATAETKAVDLSGFQNYYIPRLEWTPDANVLAVQTTSRKQNDINLIFVDGASGKAKLILSD 318

Query: 299 -NTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            +  +I++  + ++  D+++ ++ S+++G   +Y     G  + ++++          + 
Sbjct: 319 KDDAYIDVTDNLTFL-DNNEFLWTSEKDGWNHIYHYDKTGKLKNQVTKGNWEVTSYYGYD 377

Query: 356 PQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            +   + +           +  +K DG  ++ L       +  +S  
Sbjct: 378 AKNKRVFYQSTENGSINRGVYSVKIDGESKKELSVKEGTNSADFSTD 424


>gi|329961726|ref|ZP_08299757.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           fluxus YIT 12057]
 gi|328531467|gb|EGF58307.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           fluxus YIT 12057]
          Length = 845

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 71/420 (16%), Positives = 137/420 (32%), Gaps = 86/420 (20%)

Query: 63  GKVSEV---VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKE 119
              +EV   ++ DL+R   F+L +  +F  ++++    P  +         L+T      
Sbjct: 180 KDFAEVGYRMAPDLKR--RFSLYNT-AFGCRVSSVSLSPNGK--------YLLTRYSDNY 228

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
              R R    L +VK  + I+      +  S R +    S+ +Y ++ GE+         
Sbjct: 229 STKRSRTHCELTEVKTGRVIL----PDANESMRWMP--YSNKLYYTVVGER--------- 273

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----- 234
                     +  L V   D A +R     ++       +SP +  + YA  D+      
Sbjct: 274 ----------QRDLVV--YDPATMREEVLFKNVPEGYFYWSPTEDYLIYAPVDEGEKVNG 321

Query: 235 ---------------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                             R  +         +R+      +     S +GK+ L S  K 
Sbjct: 322 PLKRLLHPDDRIPGSRNRRYLVKYDMATGLSERLTYGSHNVYLNDISPDGKKLLCSTSKP 381

Query: 280 EAMD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKE- 326
           +          ++ +DL +   + L +       ASYSPD  Q++           GK  
Sbjct: 382 DITKCPFSLSSLFEIDLATLKADTLVSWDAYAGGASYSPDGKQLLLTGSPSAFGGIGKNC 441

Query: 327 -----------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                      Q ++M  +      I++D   +     W+     I F    G+   I  
Sbjct: 442 GEHPIANDFDTQAFIMDLSTKKVTPITRDFNPTVNLLQWNRTDGCIYFNTTDGDCQHIYR 501

Query: 376 MKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                 Q E L +++  + + T +    ++         +    Y+ D   +  TL+  P
Sbjct: 502 YTPKTGQFEMLPLKEDVITSFTLAEDNPAIAAYVGGGNTSVGVAYTYDAKKKASTLLANP 561



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 44/225 (19%), Positives = 77/225 (34%), Gaps = 40/225 (17%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKD-----EAMDIYSVDLQSNATERLTNTLFINISAS 308
             F   + +   S NGK  L     +             ++++            N S  
Sbjct: 202 TAFGCRVSSVSLSPNGKYLLTRYSDNYSTKRSRTHCELTEVKTGRVIL----PDANESMR 257

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---- 364
           + P S+++ +    E +  L V       ++ + ++    YF   WSP  D + +     
Sbjct: 258 WMPYSNKLYYTVVGERQRDLVVYDPATMREEVLFKNVPEGYF--YWSPTEDYLIYAPVDE 315

Query: 365 ----------------KFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGRSLI 405
                           +  G +    ++K D   G  ERL     N+     SP G+ L+
Sbjct: 316 GEKVNGPLKRLLHPDDRIPGSRNRRYLVKYDMATGLSERLTYGSHNVYLNDISPDGKKLL 375

Query: 406 FSRKKDGDTG-----SKLYSIDLNG-RNETLINTPAYASDPQWVG 444
            S  K   T      S L+ IDL   + +TL++  AYA    +  
Sbjct: 376 CSTSKPDITKCPFSLSSLFEIDLATLKADTLVSWDAYAGGASYSP 420


>gi|14521796|ref|NP_127272.1| acyl-peptide hydrolase [Pyrococcus abyssi GE5]
 gi|5459016|emb|CAB50502.1| apeH acylamino-acid-releasing enzyme (EC 3.4.19.1) (acyl-peptide
           hydrolase) (APH) (acylaminoacyl-peptidase) [Pyrococcus
           abyssi GE5]
          Length = 631

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 41/179 (22%)

Query: 269 GKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           GK+ +  V      + D    IY  D       R T     + +  +SPD   I F S R
Sbjct: 23  GKKVVFQVTEISIKENDYFSSIYLYD--GRKVRRFTFGRK-DANPRFSPDGRLIAFTSKR 79

Query: 323 EGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------KFSGEKFAI 373
             + +   LY+M  +G + + +++ K     D  +S  G  IA        K + EK  +
Sbjct: 80  SKEGRESELYLMPVDGGEARLLAKFKYG-IKDLRFSEDGKEIAVITPVEVKKVANEKEDV 138

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            V+                + P W  +G   I+ R+      + LY +D+    +  ++
Sbjct: 139 HVID---------------EIPFWF-NGIGWIYGRR------NALYLVDVESGKKRKVS 175



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/308 (16%), Positives = 112/308 (36%), Gaps = 51/308 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--- 230
           + R++  +        ++ L +M  DG   R L   +  I    RFS + +++A  T   
Sbjct: 69  DGRLIAFTSKRSKEGRESELYLMPVDGGEARLLAKFKYGIKDL-RFSEDGKEIAVITPVE 127

Query: 231 -------------------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                                    +       +YL+D    +  +++      +L+ RF
Sbjct: 128 VKKVANEKEDVHVIDEIPFWFNGIGWIYGRRNALYLVDVESGKK-RKVSPRNLDVLSVRF 186

Query: 266 SSNGKRALISVQKDEAMDIYSVD---LQSNATERLTNTLFINISASYSPDSSQI-VFESD 321
             NGK   +  Q+D        D   L+    ++LT   +  +      D   +     +
Sbjct: 187 H-NGK-LYLLAQEDREKKPMISDVYVLEGKRVKKLTPGKWRILDFVPLSDGLILKANTLE 244

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG----------DLIAFTKFSGEKF 371
           R       +      + +R+ ++  ++Y       +G            I F    G + 
Sbjct: 245 RGFATTTSIYLYRNGELRRLFKEDLSAYNSLNSDVRGAQRAELIFKDGWIYFVATDGPRA 304

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +  +  DG  ER++  D ++++ +    G  + F+  +D  T ++LY++  +G+ + + 
Sbjct: 305 NLFRVNLDGKVERVIRGDRSVESFSV---GDYIAFTA-QDATTPTELYALR-DGKEKRIT 359

Query: 432 NTPAYASD 439
           +  A+  D
Sbjct: 360 DFNAWIRD 367


>gi|332026027|gb|EGI66178.1| WD repeat-containing protein 51B [Acromyrmex echinatior]
          Length = 493

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 88/230 (38%), Gaps = 16/230 (6%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           + ++VS  +   L +   D  N       +  I F+  +SP+ + +A A+ D    +R++
Sbjct: 32  THTLVSSSLDTKLALWRLDKLNCEKFKAHKSYI-FDVCYSPDGEFIATASKD--QSIRIW 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             D       +     RS + + +FS  G +  +SV  DE + ++ V  +    +  +  
Sbjct: 89  NEDHLNFAEYR---GHRSPVRSVQFSPKGDK-FVSVSNDENVLLW-VPYRGKYFKTFSEH 143

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   +SPD   +V  SD    ++   +    S+Q   + + E       + P G +
Sbjct: 144 TDWVRCVKFSPDGKLLVSCSD----DKTVKIWDITSEQCVKTFNMEVLVRYIEFHPTGTI 199

Query: 361 IAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRK 409
           I      G    I +     +   +    D  +    + P+G+ ++ +  
Sbjct: 200 IGSANVDG---YIKLYDLRTNSLYQRYTHDRGINMIKFHPNGKFILTASD 246



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 51/294 (17%), Positives = 101/294 (34%), Gaps = 47/294 (15%)

Query: 139 IIGKKFFSSPASWR--------KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           ++     +  A WR          AH     I+       G+F          + +    
Sbjct: 35  LVSSSLDTKLALWRLDKLNCEKFKAHK--SYIFDVCYSPDGEF----------IATASKD 82

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            S+ + + D  N       R  +    +FSP   K    + D+     V L      +  
Sbjct: 83  QSIRIWNEDHLNFAEYRGHRSPVRSV-QFSPKGDKFVSVSNDE----NVLLWVPYRGKYF 137

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD----LQSNATERLTNTLFINIS 306
           K        +   +FS +GK  L+S   D+ + I+ +     +++   E L    +I   
Sbjct: 138 KTFSEHTDWVRCVKFSPDGK-LLVSCSDDKTVKIWDITSEQCVKTFNMEVLV--RYIEFH 194

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + +   S  V     +G  +LY +++N S  +R + D+  +     + P G  I     
Sbjct: 195 PTGTIIGSANV-----DGYIKLYDLRTN-SLYQRYTHDRGINMIK--FHPNGKFILTASD 246

Query: 367 SGEKFAIGVMK-KDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                 + +    +G     L E  + +    +S +G   +F+    G T  ++
Sbjct: 247 DYSVKVLLIKNILNGRPIYSLKEHYDKVTCIAFSNNGE--LFAS---GSTDQQI 295


>gi|224023607|ref|ZP_03641973.1| hypothetical protein BACCOPRO_00314 [Bacteroides coprophilus DSM
           18228]
 gi|224016829|gb|EEF74841.1| hypothetical protein BACCOPRO_00314 [Bacteroides coprophilus DSM
           18228]
          Length = 497

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 79/473 (16%), Positives = 149/473 (31%), Gaps = 123/473 (26%)

Query: 9   EELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANY-----------SPVSIAFTKFVS 57
           + L +   LCL +++ G       + + +V   S               P++IA   FV 
Sbjct: 4   KSLRVNAALCLWILICGVVLSGCGYTWQEVDRMSGKAPRIYPDYSGVVFPLNIAPPNFV- 62

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWN-----SLGAQVLV 112
           I E G +       D           +  F    ++P+ I     W      + G ++ +
Sbjct: 63  IQEEGDRFQAAFGHD----------GKVDFVCGGSDPEIIIPEDKWKELTEQAAGQEIFI 112

Query: 113 TGRVIKEGK--DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
              V + G       ++    D   +                       D I   +    
Sbjct: 113 RIAVRQNGSWTGFTDIK----DTVSQ-----------------------DPIDPYLV--- 142

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD---QILFEPRF---SPNQQ 224
                R+L+    + +   +  +   D  G     +  ++D   Q L    F   SP++ 
Sbjct: 143 ----YRLLYPGYELWN---EMGIYQRDLTGYEEFPVLENKDFGKQCLNCHTFNHNSPDEM 195

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------- 277
            +     D   ++R      ++  +P+  G        P +  +GK    S+        
Sbjct: 196 MIHVRGKDGGTLIRRNGTLEKVSASPQ--GAAHGSTY-PAWHPSGKYIAYSMNEIQQFFH 252

Query: 278 KDEAMDIYSVDLQSN-------ATERLTNTL-----FINISASYSPDSSQIVFE---SDR 322
            +    I   DL ++         E LT++L      +    ++SPD   + F    +  
Sbjct: 253 ANGQKPIEVSDLAADLGVYDVVRHEMLTDSLIYGDGAMETFPAWSPDGRTLYFCRGNAYH 312

Query: 323 EG------KEQLYVMQSNGSDQK---RI-----SQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +G      +  L  +  +    +   RI     +  K  S   P  SP G  + FT+   
Sbjct: 313 QGAALDSLRYDLCSIDFDPETGRFGDRINCLYEASAKGKSVSFPRVSPDGCYLLFTQSDY 372

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-----------WSPSGRSLIFSRKK 410
             F+I   + D      L      + P+           WS SG+  +FS K+
Sbjct: 373 GNFSIWHPESD-LYLLELANGKIHELPSVNSKDVDSFHTWSSSGKWFVFSSKR 424



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 22/117 (18%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKF---------- 371
           GK+   +++ NG+ +K  +  + A++    P W P G  IA++    ++F          
Sbjct: 201 GKDGGTLIRRNGTLEKVSASPQGAAHGSTYPAWHPSGKYIAYSMNEIQQFFHANGQKPIE 260

Query: 372 ------AIGVMKKDGSQE---RLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKL 418
                  +GV      +     L+  D  ++  P WSP GR+L F R      G+ L
Sbjct: 261 VSDLAADLGVYDVVRHEMLTDSLIYGDGAMETFPAWSPDGRTLYFCRGNAYHQGAAL 317



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 44/112 (39%), Gaps = 15/112 (13%)

Query: 187 GIIKNSLCVMDRDGA--------NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-- 236
             ++  LC +D D          N  Y   ++ + +  PR SP+   + +   D  +   
Sbjct: 318 DSLRYDLCSIDFDPETGRFGDRINCLYEASAKGKSVSFPRVSPDGCYLLFTQSDYGNFSI 377

Query: 237 ----LRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMD 283
                 +YL++    +  +    N + +     +SS+GK  + S ++ + + 
Sbjct: 378 WHPESDLYLLELANGKIHELPSVNSKDVDSFHTWSSSGKWFVFSSKRLDGLW 429


>gi|229083480|ref|ZP_04215827.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock3-44]
 gi|228699836|gb|EEL52474.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock3-44]
          Length = 657

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 108/294 (36%), Gaps = 52/294 (17%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY----- 231
           I ++S        KN + V   DG +   +T  ++ +    ++ P  +   Y        
Sbjct: 82  IAYLSPVGDGDNKKNQIFVKSIDGYSGVQITDEKEGVSKF-KWEPTGKGFYYVAQSKESE 140

Query: 232 ----------DDEDILRVYLMDTRIDRAPKRIGN-----FRSMILAP------------R 264
                     D   I + Y  +       +++         + ++ P             
Sbjct: 141 AIKKRKELYGDFHHIGKEYQNNCLYYIEVEKVIQNDKYEHENSVVYPLTDGKDFHIHEFD 200

Query: 265 FSSNGKRALISVQKDEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            S++GK+ +        M      D+Y +D+++   +++     +  S  +SP+ S+I +
Sbjct: 201 ISNDGKKVVFMATPSPNMGDYMNGDLYILDIKAGELQKMNRDKLLGGSVCFSPEGSKICY 260

Query: 319 E-SDREG--------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             S RE            L +   N  +  +   D +++     W+ +G  I     +  
Sbjct: 261 SASIRERDYYKTHIQDNTLEIYDINNGELIQPLTDFDSTVIPLRWTAKG--ILIRWQNKT 318

Query: 370 KFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            + IG++ ++G+ ERL    DS +   + +  G  + +S+    +T  ++Y  D
Sbjct: 319 NYLIGLLSENGTVERLSEKADSFIMDASITRDGNHISYSKAITNET-FEIYLDD 371



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 65/207 (31%), Gaps = 50/207 (24%)

Query: 266 SSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S NGK      +     D      ++  +     +  L      +    +SPDS  I + 
Sbjct: 26  SDNGKNVAFVKKTANWKDNKYRNHVWIYEKDKGRSYPLATGDIDSTYPLWSPDSKNIAYL 85

Query: 320 SDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-------- 367
           S        K Q++V   +G    +I+ +KE       W P G    +   S        
Sbjct: 86  SPVGDGDNKKNQIFVKSIDGYSGVQITDEKEG-VSKFKWEPTGKGFYYVAQSKESEAIKK 144

Query: 368 -----GEKFAIG---------------VMKKD-----GSQERLLVE--DSNLQAPTWSPS 400
                G+   IG               V++ D      S    L +  D ++     S  
Sbjct: 145 RKELYGDFHHIGKEYQNNCLYYIEVEKVIQNDKYEHENSVVYPLTDGKDFHIHEFDISND 204

Query: 401 GRSLIFSRKKDGDTG----SKLYSIDL 423
           G+ ++F      + G      LY +D+
Sbjct: 205 GKKVVFMATPSPNMGDYMNGDLYILDI 231



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 104/310 (33%), Gaps = 63/310 (20%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--YD 232
           + FV ++        +N + + ++D     Y   + D     P +SP+ + +AY +   D
Sbjct: 32  VAFVKKTANWKDNKYRNHVWIYEKD-KGRSYPLATGDIDSTYPLWSPDSKNIAYLSPVGD 90

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-------- 284
            ++      + +    +  +I + +  +   ++   GK      Q  E+  I        
Sbjct: 91  GDNKKNQIFVKSIDGYSGVQITDEKEGVSKFKWEPTGKGFYYVAQSKESEAIKKRKELYG 150

Query: 285 --------------YSVDL-----------QSNATERLTNTLFINI-SASYSPDSSQIVF 318
                         Y +++           +++    LT+    +I     S D  ++VF
Sbjct: 151 DFHHIGKEYQNNCLYYIEVEKVIQNDKYEHENSVVYPLTDGKDFHIHEFDISNDGKKVVF 210

Query: 319 ESDREGKEQ------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--------- 363
            +             LY++     + +++++DK        +SP+G  I +         
Sbjct: 211 MATPSPNMGDYMNGDLYILDIKAGELQKMNRDKLLG-GSVCFSPEGSKICYSASIRERDY 269

Query: 364 --TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYS 420
             T        I  +  +G   + L +  +   P  W+  G  + +       T   +  
Sbjct: 270 YKTHIQDNTLEIYDIN-NGELIQPLTDFDSTVIPLRWTAKGILIRW----QNKTNYLIGL 324

Query: 421 IDLNGRNETL 430
           +  NG  E L
Sbjct: 325 LSENGTVERL 334



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 12/114 (10%)

Query: 308 SYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           + S +   + F        D + +  +++ + +      ++   +     P+WSP    I
Sbjct: 24  NISDNGKNVAFVKKTANWKDNKYRNHVWIYEKDKGRSYPLAT-GDIDSTYPLWSPDSKNI 82

Query: 362 AFTKFSGEKFA----IGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           A+    G+       I V   DG S  ++  E   +    W P+G+   +  + 
Sbjct: 83  AYLSPVGDGDNKKNQIFVKSIDGYSGVQITDEKEGVSKFKWEPTGKGFYYVAQS 136



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 36/94 (38%), Gaps = 9/94 (9%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPS 400
           +      S  G  +AF K +        +  + + +KD G    L   D +   P WSP 
Sbjct: 19  TLSGTNISDNGKNVAFVKKTANWKDNKYRNHVWIYEKDKGRSYPLATGDIDSTYPLWSPD 78

Query: 401 GRSLIFSR--KKDGDTGSKLYSIDLNGRNETLIN 432
            +++ +        +  ++++   ++G +   I 
Sbjct: 79  SKNIAYLSPVGDGDNKKNQIFVKSIDGYSGVQIT 112


>gi|325857427|ref|ZP_08172482.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           denticola CRIS 18C-A]
 gi|325483137|gb|EGC86117.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           denticola CRIS 18C-A]
          Length = 710

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 80/242 (33%), Gaps = 64/242 (26%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I A + S +G+R +  V      +      +  +D        LT +      A++  
Sbjct: 39  GRIGAAQASPDGRRIVYQVGYYSVKENKGHQVLRIMDADGRNDRLLTTSAANESDAAWL- 97

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--------- 362
           D++ + F +      QL+ M+++G+D++++++  +       +SP    +          
Sbjct: 98  DNNTLAFLT----GGQLWTMKADGTDRRQLTR-SDIDIEGFRFSPDRRRVVLIKSIPYYG 152

Query: 363 ---------------------------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                                      +   +   F   V          ++E    ++P
Sbjct: 153 TIRQNPSDLPKATGMVITDMNYRHWDHYVTTNAHPFVADVTDGGIGDGVDVLEGEPYESP 212

Query: 396 ----------TWSPSGRSLIFS-RKKDGD-----TGSKLYSIDLNGRNETLINTPAYASD 439
                      WS   +S+ ++ RKK+G      T + +Y  ++  R    +  P    +
Sbjct: 213 LAPFGGIEQIDWSRDSKSVAYTCRKKEGTQYAISTDADIYIYNVETRRTKNLCKPEGYVE 272

Query: 440 PQ 441
           P 
Sbjct: 273 PA 274



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 50/374 (13%), Positives = 118/374 (31%), Gaps = 87/374 (23%)

Query: 144 FFSSPASWRKIAHTI-SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           +        ++   + +D     +        S   ++  + ++ +    L  M  DG +
Sbjct: 60  YSVKENKGHQVLRIMDADGRNDRLLTTSAANESDAAWLDNNTLAFLTGGQLWTMKADGTD 119

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVA------------------------------YATYD 232
            R LT S   I    RFSP++++V                               Y  +D
Sbjct: 120 RRQLTRSDIDIEGF-RFSPDRRRVVLIKSIPYYGTIRQNPSDLPKATGMVITDMNYRHWD 178

Query: 233 DE-----DILRVYLMDTRIDRAPKRI-GNFRSMILAP-------RFSSNGKRALISVQKD 279
                        + D  I      + G      LAP        +S + K    + +K 
Sbjct: 179 HYVTTNAHPFVADVTDGGIGDGVDVLEGEPYESPLAPFGGIEQIDWSRDSKSVAYTCRKK 238

Query: 280 EAM--------DIYSVDLQSNATERL-------------TNTL--------------FIN 304
           E          DIY  ++++  T+ L             T ++                +
Sbjct: 239 EGTQYAISTDADIYIYNVETRRTKNLCKPEGYVEPAIDATKSMRDQAVNHQAGDMNVGYD 298

Query: 305 ISASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           ++  +SPD   I ++S         + +L V +     +  +++  +++  +  W     
Sbjct: 299 VNPKFSPDGRYIAWQSMKNNGYESDRNRLCVYELATGRKTYVTESFDSNVDEYTWGADSK 358

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           ++ F         I      G + + L E  +    + +  G   + + ++     ++++
Sbjct: 359 VLYFIGVWHATENIYQTNLKG-EVKQLTE-GDHNYVSIALLGDRKLLAIRQSLSQANEIF 416

Query: 420 SIDLNGRNETLINT 433
           ++    + +T + T
Sbjct: 417 AVTPAKKEKTSLQT 430



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 78/246 (31%), Gaps = 23/246 (9%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRI 253
           RD A               P+FSP+ + +A+ +  +     D  R+ + +    R     
Sbjct: 282 RDQAVNHQAGDMNVGYDVNPKFSPDGRYIAWQSMKNNGYESDRNRLCVYELATGRKTYVT 341

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +F S +    + ++ K            +IY  +L+    ++LT      +S +   D 
Sbjct: 342 ESFDSNVDEYTWGADSKVLYFIGVWHATENIYQTNLK-GEVKQLTEGDHNYVSIALLGDR 400

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +          +++ +     ++  +             S +   I      GE    
Sbjct: 401 KLLAIRQSLSQANEIFAVTPAKKEKTSLQT---------QLSFENKHIYDQLALGEVHDR 451

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            V   DG + +  V       P + P+ +   L+F         S+ +S      N  ++
Sbjct: 452 WVKTTDGKEMQEWVVTP----PHFDPNRKYPTLLFCEGGPQSPVSQFWSYRW---NLQIM 504

Query: 432 NTPAYA 437
               Y 
Sbjct: 505 AANGYV 510


>gi|168700323|ref|ZP_02732600.1| probable serine/threonine protein kinase [Gemmata obscuriglobus UQM
            2246]
          Length = 1148

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 58/325 (17%), Positives = 101/325 (31%), Gaps = 58/325 (17%)

Query: 112  VTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
            +  RV      R  V        ++WDV   ++ +       P +   + H         
Sbjct: 785  LVARVAYHPSGRRLVTADEDGLIKVWDVSRDQRALEL-----PPAEPDVWH--------- 830

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF------ 219
                    + R +  S       + ++   +  D A  R +   + Q    P +      
Sbjct: 831  --------DDRSVAFSTDGNQVAVASTFGFVGYDLAAARPIFRHQLQAYERPEWPLGYIA 882

Query: 220  -SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--- 275
             S + +  A    D +    V + D R   A   +   R+ +    FS +G+R  ++   
Sbjct: 883  LSSDGRLDARP--DRKKPTNVRVTDVRTGTAV-CVLPGRADVRCVAFSPDGRRLAVAHGE 939

Query: 276  --VQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIVF-------ESDREG 324
                +   + ++ +       ER  L     +   A +S D S +V          D  G
Sbjct: 940  LDAAETRVVAVWRLPEPGGEPERAELLCERPVQALA-FSADGSTLVAGERGTHTAGDPRG 998

Query: 325  K---EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DG 380
            K     + V       Q R               P+G  +A T   G   A+ V     G
Sbjct: 999  KWADGHVSVWDVGTGRQLRRWAAHPGPVQSVATDPKGRWVA-TAGRGADEAVRVWDAHTG 1057

Query: 381  SQERLLVEDSNLQAPTWSPSGRSLI 405
            +  R L   + L   T+SP G  L 
Sbjct: 1058 ALLRDLRGPTRLTHVTFSPDGTRLA 1082



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 83/263 (31%), Gaps = 38/263 (14%)

Query: 191 NSLCVMDRDGANIRY-----LTPSRDQILFEPRF-------SPNQQKVAYATYDDEDILR 238
             L  +  DG    +           +    P +       SPN +  A       ++ +
Sbjct: 578 TRLVTLSPDGKVRSWDVPSGRLHRSAEYRNSPYWIGTVAALSPNGRVAA-----VPNLTK 632

Query: 239 VYLMDTRIDRAPKRIGN-FRSMILAPRFSSNGKRALISVQKD------EAMDIYSVDLQS 291
           + L+D         +   F S   A  +S +G     + +            I   ++ +
Sbjct: 633 IDLLDVETFAPVGALATPFDSAAGACDWSPDGSLLAAAGETKPKGKPLGESHIGVWEVGT 692

Query: 292 NATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                L  +   +   A++SPD     F +   G   + V+ +    +  + +      +
Sbjct: 693 GVRRYLIPS---DTKIAAFSPDGR---FLATALGGT-VRVVDAPTGREVCVMRGHAGLVY 745

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
              W+P G  +A            V   DG + R+       +    + PSGR L+    
Sbjct: 746 GLCWAPDGRFVASCSADRTARVWSV--PDGGEHRIFRGHAGLVARVAYHPSGRRLV---T 800

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
            D D   K++ +  + R   L  
Sbjct: 801 ADEDGLIKVWDVSRDQRALELPP 823



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 33/222 (14%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDE--------DILRVYLMDTRIDRAPKRIGNFR 257
              +  Q +    FS + + +A +  +          +   + + D    R    I    
Sbjct: 506 TLRAHRQPVCGLAFSRDGRFLASSAGERGYLGRKPDRNPGELAVWDGNTFRKIVDIAGHD 565

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTL-FINISASYSPDS 313
                  F   G R + ++  D  +  +  D+ S    R     N+  +I   A+ SP+ 
Sbjct: 566 GRADGVTFDPTGTRLV-TLSPDGKVRSW--DVPSGRLHRSAEYRNSPYWIGTVAALSPNG 622

Query: 314 SQIVFESDREGKEQLYVMQS----NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG- 368
                         L  +        +    ++   +++     WSP G L+A    +  
Sbjct: 623 RVAA-------VPNLTKIDLLDVETFAPVGALATPFDSAAGACDWSPDGSLLAAAGETKP 675

Query: 369 -----EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 +  IGV +      R L+  S+ +   +SP GR L 
Sbjct: 676 KGKPLGESHIGVWEVGTGVRRYLI-PSDTKIAAFSPDGRFLA 716



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 73/251 (29%), Gaps = 30/251 (11%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRV 239
                    ++ V D        + P R  +     FSP+ +++A A  + +     ++ V
Sbjct: 892  RPDRKKPTNVRVTDVRTGTAVCVLPGRADVRCV-AFSPDGRRLAVAHGELDAAETRVVAV 950

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK------------DEAMDIYSV 287
            + +        +        + A  FS++G   +   +             D  + ++ V
Sbjct: 951  WRLPEPGGEPERAELLCERPVQALAFSADGSTLVAGERGTHTAGDPRGKWADGHVSVWDV 1010

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                    R         S +  P    +   + R   E + V  ++     R       
Sbjct: 1011 -GTGRQLRRWAAHPGPVQSVATDPKGRWVA-TAGRGADEAVRVWDAHTGALLR-DLRGPT 1067

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL------LVEDSNLQA-PTWSPS 400
                  +SP G  +A     G    + +       E L      L E  N +    +SP 
Sbjct: 1068 RLTHVTFSPDGTRLAAVGCEG---RVQLWDPASGLEVLTLYGNPLNEGRNYETRVAFSPD 1124

Query: 401  GRSLIFSRKKD 411
            G  L  +    
Sbjct: 1125 GTRLAVNSWTG 1135



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 62/225 (27%), Gaps = 28/225 (12%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG     +      ++    + P+ +++  A  D    +     D R    P    +  
Sbjct: 771 PDGG-EHRIFRGHAGLVARVAYHPSGRRLVTADEDGLIKVWDVSRDQRALELPPAEPDVW 829

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASY------- 309
               +  FS++G +  ++            DL   A   +            +       
Sbjct: 830 HDDRSVAFSTDGNQVAVASTFGFVG----YDLA--AARPIFRHQLQAYERPEWPLGYIAL 883

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--- 366
           S D        DR+    + V          +     A      +SP G  +A       
Sbjct: 884 SSDGRLDA-RPDRKKPTNVRVTDVRTGTAVCVLP-GRADVRCVAFSPDGRRLAVAHGELD 941

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI 405
                  A+  + + G +      +   + P     +S  G +L+
Sbjct: 942 AAETRVVAVWRLPEPGGEPER--AELLCERPVQALAFSADGSTLV 984


>gi|115449887|ref|XP_001218722.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114187671|gb|EAU29371.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1251

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 82/256 (32%), Gaps = 29/256 (11%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               ++   D    ++R         +    FS + + +A  + D      V L D    
Sbjct: 741 SHDKTIKFWDTTTGSLRQSLSGHSDWVRAIAFSSSGRLLASGSQDS----TVKLWDAVTG 796

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                       I +  FS +G   ++S   D  + ++  D+ + + +R  N     + A
Sbjct: 797 APLNDFCGHSGPICSVDFSPSGD-LVVSGSVDCTLRLW--DVTTGSLKRTLNGHTQPVQA 853

Query: 308 -SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SP+   +V  S     + + +  +     ++  +          +S  G LIA    
Sbjct: 854 VAFSPNGEVLVSGSQ---DKTIKLWATTPGSLEQTLEGHSDWVRAIAFSSCGRLIASGSH 910

Query: 367 SGEKFAIGVMKKDGSQERLLV------------EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            G    + V        +                 +++ A  +SP GR L        D+
Sbjct: 911 DGT---VRVWDAGAGAVKQAFTVQGHLRNTVVGHQASVGAVAFSPDGRLLACGTH---DS 964

Query: 415 GSKLYSIDLNGRNETL 430
              L+ I       TL
Sbjct: 965 TISLWDITTGALRTTL 980



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 81/260 (31%), Gaps = 50/260 (19%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VVSG +  +L + D    +++       Q +    FSPN + +   + D      + L  
Sbjct: 821  VVSGSVDCTLRLWDVTTGSLKRTLNGHTQPVQAVAFSPNGEVLVSGSQDK----TIKLWA 876

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            T      + +      + A  FSS G+    S   D  + ++  D  + A ++       
Sbjct: 877  TTPGSLEQTLEGHSDWVRAIAFSSCGRLIA-SGSHDGTVRVW--DAGAGAVKQ------- 926

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                          F                    +      +AS     +SP G L+A 
Sbjct: 927  -------------AFTVQ--------------GHLRNTVVGHQASVGAVAFSPDGRLLAC 959

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                     I +        R  +     ++ A  +SP  + L        D+ +KL+ I
Sbjct: 960  GTHDST---ISLWDITTGALRTTLAGHIFSVGALAFSPDSQLLA---SGSFDSTAKLWDI 1013

Query: 422  DLNGRNETLI-NTPAYASDP 440
                   +LI  TP    D 
Sbjct: 1014 STEALQSSLIEETPPEVIDG 1033



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/330 (13%), Positives = 98/330 (29%), Gaps = 59/330 (17%)

Query: 109  QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             ++V+G V            RLWDV      + +         + +A + + ++      
Sbjct: 819  DLVVSGSV--------DCTLRLWDVTTGS--LKRTLNGHTQPVQAVAFSPNGEVL----- 863

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                            VSG    ++ +      ++          +    FS   + +A 
Sbjct: 864  ----------------VSGSQDKTIKLWATTPGSLEQTLEGHSDWVRAIAFSSCGRLIAS 907

Query: 229  ATYDDEDILRVYLMD--------TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
             ++D    +RV+           T        +   ++ + A  FS +G+        D 
Sbjct: 908  GSHD--GTVRVWDAGAGAVKQAFTVQGHLRNTVVGHQASVGAVAFSPDGRLLA-CGTHDS 964

Query: 281  AMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIV---FESD---REGKEQLYVMQS 333
             + ++  D+ + A    L   +F   + ++SPDS  +    F+S     +   +      
Sbjct: 965  TISLW--DITTGALRTTLAGHIFSVGALAFSPDSQLLASGSFDSTAKLWDISTEALQSSL 1022

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL- 392
                   +      +     +S    ++A          + +           +E     
Sbjct: 1023 IEETPPEVIDGHSGTVGIVAFSFDKKILASGSIDKT---VKLWDVITGSLLYTLEGHLDL 1079

Query: 393  -QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              A  +SP GR L        D   KL+  
Sbjct: 1080 IWAVEFSPDGRLLA---SGSNDGAIKLWDT 1106



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 74/238 (31%), Gaps = 41/238 (17%)

Query: 113  TGRVIKEGKDRLRV------EFRLWDVKDR----------------------KQIIGKKF 144
             G V      RL           LWD+                         + +    F
Sbjct: 945  VGAVAFSPDGRLLACGTHDSTISLWDITTGALRTTLAGHIFSVGALAFSPDSQLLASGSF 1004

Query: 145  FSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL------FVSESVVSGIIKNSLCVMDR 198
             S+   W      +   + +    E  D +S  +      F  + + SG I  ++ + D 
Sbjct: 1005 DSTAKLWDISTEALQSSLIEETPPEVIDGHSGTVGIVAFSFDKKILASGSIDKTVKLWDV 1064

Query: 199  DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
               ++ Y       +++   FSP+ + +A  + D      + L DT        +     
Sbjct: 1065 ITGSLLYTLEGHLDLIWAVEFSPDGRLLASGSNDG----AIKLWDTYNGALQHTLDGHSG 1120

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             I A  FS  G + L S   D  + ++  +      ++  +   +     +S D + +
Sbjct: 1121 AIRAVAFSP-GCQLLASGSTDNTVKVW--NSADGTLKQDLSVKGVVTDMKFSIDGATL 1175


>gi|209524478|ref|ZP_03273026.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
 gi|209494936|gb|EDZ95243.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
          Length = 589

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 81/223 (36%), Gaps = 16/223 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A  ++D      + L   +       +      ILA  FS +GK       
Sbjct: 308 AFSPDGNILAGGSFDR----TIRLWRPQTGEFMISLLGSSQPILAIAFSPDGKLLA-GGS 362

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISAS--YSPDSSQIVFESDREGKEQLYVMQSNG 335
            D  + +++++  S     +       +S S  +SP    I   SD +G  +++ +    
Sbjct: 363 GDGQIHLWNLE-NSEEVIAIAAHETDRVSMSITFSPKGDIIASGSD-DGTVKIWKLS--- 417

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           + Q   +            S  G+L+A    S     +  +       +LL  + ++ A 
Sbjct: 418 TCQLCHTLQHSRGINGIAISANGELLAAAS-SDNSIHLWEVNSTEHLGQLLGHERDINAI 476

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            +SP+ + L  +     D   KL+ ++     +TL     +  
Sbjct: 477 AFSPNSQILASASS---DNTIKLWDMETQQLLKTLTGHEDWVR 516



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 111/345 (32%), Gaps = 66/345 (19%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKF-----------FSSPASWRKIAHTISDDIY- 163
           +I+    +L     L D    K+ IG              + +P   R  A + + D+Y 
Sbjct: 146 IIRSANGQLV----LVDFGAAKEAIGSALLRTGTIIGTPEYIAPEQLRGKA-SFASDLYS 200

Query: 164 ------QSITGEKGD--FNSRIL------FVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
                   +T       F++         ++  + +S  +   L  +  D  N RY + S
Sbjct: 201 LGVTCIHLLTQMSPFDLFDTGEFCWVWHHYLVNNPISDELTKILNRLIEDATNNRYQSAS 260

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
                   R   NQ  V                ++   + P+ + ++ S +    FS +G
Sbjct: 261 EVLQDLNAR--SNQLSVITQPVSFPSA-----KNSVGWKRPQTLSDYWSSVSCVAFSPDG 313

Query: 270 KRAL-------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
                      I + + +  +     L S+        L I    ++SPD   +      
Sbjct: 314 NILAGGSFDRTIRLWRPQTGEFMISLLGSSQPI-----LAI----AFSPDGKLLA---GG 361

Query: 323 EGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            G  Q+++     S++     + + +       +SP+GD+IA     G    + + K   
Sbjct: 362 SGDGQIHLWNLENSEEVIAIAAHETDRVSMSITFSPKGDIIASGSDDGT---VKIWKLST 418

Query: 381 SQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            Q    L     +     S +G  L  +     D    L+ ++  
Sbjct: 419 CQLCHTLQHSRGINGIAISANGELLAAASS---DNSIHLWEVNST 460



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 94/290 (32%), Gaps = 18/290 (6%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D   + G  F  +   WR         +  S         S    +  +  SG  +  L 
Sbjct: 312 DGNILAGGSFDRTIRLWRPQTGEFMISLLGSSQPILAIAFSPDGKL-LAGGSGDGQIHLW 370

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            ++     I       D++     FSP    +A  + D      V +      +    + 
Sbjct: 371 NLENSEEVIAIAAHETDRVSMSITFSPKGDIIASGSDDG----TVKIWKLSTCQLCHTLQ 426

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           + R +      S+NG+    +   D ++ ++ V+   +  + L +   IN  A +SP+S 
Sbjct: 427 HSRGINGI-AISANGELLA-AASSDNSIHLWEVNSTEHLGQLLGHERDINAIA-FSPNSQ 483

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW--SPQGDL--IAFTKFSGEK 370
            +   S       + +         +     E       +  SP  D   +  +  +   
Sbjct: 484 ILASASS---DNTIKLWDMETQQLLKTLTGHEDWVRTVAFIRSPDQDRKSLLVSGSADRT 540

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             I  + +  + + L+    ++ A   SP+ R++        D   K++ 
Sbjct: 541 IKIWDLDQGKAIDTLVGHTKDINAIAISPNHRTIA---SGSSDNTIKIWR 587


>gi|209964493|ref|YP_002297408.1| dipeptidyl peptidase IV [Rhodospirillum centenum SW]
 gi|209957959|gb|ACI98595.1| dipeptidyl peptidase IV [Rhodospirillum centenum SW]
          Length = 744

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 56/188 (29%), Gaps = 48/188 (25%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-------------- 264
           FSP+ + V Y      D  R  L    +    + +        A                
Sbjct: 51  FSPDGRWVTYLKPSAADASRRDLWGYELATGRQTLLVDAGEFAAATESEEERARRERQRI 110

Query: 265 ---------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                    + + GK  ++    D    IY  +L      RLT T         SPD  +
Sbjct: 111 RETGVTEYVWDAAGKAVVLPSSGD----IYLKELA-GPIRRLTRTPEAETDPKVSPDGRR 165

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQGD 359
           I +   R G   LYV+   G  +  ++ D      + +                WSP G 
Sbjct: 166 IAYV--RGGN--LYVLDLAGGAETALTTDGADGILNGMAEFVAQEEMDRDTGYWWSPDGS 221

Query: 360 LIAFTKFS 367
            IA+ +  
Sbjct: 222 RIAYARVD 229



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 56/190 (29%), Gaps = 53/190 (27%)

Query: 262 APRFSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFIN-------------- 304
           A  FS +G+       S       D++  +L +     L +                   
Sbjct: 48  AVHFSPDGRWVTYLKPSAADASRRDLWGYELATGRQTLLVDAGEFAAATESEEERARRER 107

Query: 305 --------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                       +      +V  S  +    +Y+ +  G   +R+++  EA   DP  SP
Sbjct: 108 QRIRETGVTEYVWDAAGKAVVLPSSGD----IYLKELAG-PIRRLTRTPEAE-TDPKVSP 161

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQAPTWS 398
            G  IA+ +       + V+   G  E  L  D                         WS
Sbjct: 162 DGRRIAYVR----GGNLYVLDLAGGAETALTTDGADGILNGMAEFVAQEEMDRDTGYWWS 217

Query: 399 PSGRSLIFSR 408
           P G  + ++R
Sbjct: 218 PDGSRIAYAR 227



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 75/269 (27%), Gaps = 57/269 (21%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF---- 256
           A          +   +P+ SP+ +++AY          +Y++D           +     
Sbjct: 141 AGPIRRLTRTPEAETDPKVSPDGRRIAYV-----RGGNLYVLDLAGGAETALTTDGADGI 195

Query: 257 -RSMILAPR-----------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              M                +S +G R   +      +D  +V L +             
Sbjct: 196 LNGMAEFVAQEEMDRDTGYWWSPDGSRIAYA-----RVDERAVPLVNRY----------- 239

Query: 305 ISASYSPDSSQIV-----FESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQ 357
               Y  D  ++V     F        +L+V    G     +        +     W P 
Sbjct: 240 ---DYGADGVKVVPQRYPFAGGPNAVVRLFVQAVAGGPPVAVDLGPSEDIYLARVDWRPD 296

Query: 358 GDL-IAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPT-----WSPSGRSLIFSRKK 410
           G L +       ++  +          R +L E             + P GR + +S   
Sbjct: 297 GGLAVQRLSRDHKRLDLLFADPATGVSRVVLSETGKTWVDVHSDLRFLPDGRFV-WSSAA 355

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASD 439
           DG     L+    +GR    I    + +D
Sbjct: 356 DGFR--HLFLHGADGRRLNAITRGDWDAD 382



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/305 (12%), Positives = 86/305 (28%), Gaps = 49/305 (16%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP----- 217
            + +T          +      ++ +   +L V+D  G     LT      +        
Sbjct: 144 IRRLTRTPEAETDPKVSPDGRRIAYVRGGNLYVLDLAGGAETALTTDGADGILNGMAEFV 203

Query: 218 -----------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                       +SP+  ++AYA  D+  +  V   D   D        +          
Sbjct: 204 AQEEMDRDTGYWWSPDGSRIAYARVDERAVPLVNRYDYGADGVKVVPQRYP--------- 254

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDRE 323
                   +   +  + ++   +       +      +I  +   + PD    V    R+
Sbjct: 255 -------FAGGPNAVVRLFVQAVAGGPPVAVDLGPSEDIYLARVDWRPDGGLAVQRLSRD 307

Query: 324 GKE-QLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKK 378
            K   L          + +  +   ++ D      + P G  + ++  +     + +   
Sbjct: 308 HKRLDLLFADPATGVSRVVLSETGKTWVDVHSDLRFLPDGRFV-WSSAADGFRHLFLHGA 366

Query: 379 DGSQERLLVEDSNLQAPTWSPS---GRSLIFSRKKDGDTGSKLYSIDLNG----RNETLI 431
           DG +   +                 GR ++F+   DG     +Y+  L+G    +   L 
Sbjct: 367 DGRRLNAITRGDWDADAVVGLDTEAGR-VLFTGFADGPLERHVYAAALDGSDAAKPRRLS 425

Query: 432 NTPAY 436
               +
Sbjct: 426 GLAGW 430


>gi|168700043|ref|ZP_02732320.1| WD-40 repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 1128

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 72/206 (34%), Gaps = 14/206 (6%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
             R + +FE RFSP+ +++  + +  +  + V+  +    R   R+    + +    FS 
Sbjct: 636 DPRAEPMFEYRFSPDGKRIVSSGWHPQTAMDVW--EVSTGRRVARLEGHENQVSNTAFSP 693

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATER-----LTNTLFINISASYSPDSSQIVFESDR 322
           +G+    S   D  + ++ +   +   +R     L          +++PD ++++  SD 
Sbjct: 694 DGRLLA-SCSMDRTVRVWDIGPDARGEKREAVHVLEGHTGWIQRVAFNPDGTRLLSASD- 751

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ---GDLIAFTKFSGEKFAIGVMKKD 379
                L            + +   +      +      G  +  +    +   +  +   
Sbjct: 752 --DRTLRYWDVKRGKLVAVLRGHSSEVDCGAFHIDPGTGTALIASHARDDTVRLWDVWSA 809

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
            +   L    S + + T+ P G  + 
Sbjct: 810 ENDYALRGHGSYVYSATFFPDGDRIA 835



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 97/304 (31%), Gaps = 43/304 (14%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            R++    DR     R WDVK  K +   +  SS               +           
Sbjct: 745  RLLSASDDR---TLRYWDVKRGKLVAVLRGHSSEVD--------CGAFHI------DPGT 787

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
               L  S +    +    +   + D     Y        ++   F P+  ++A A +DD 
Sbjct: 788  GTALIASHARDDTVRLWDVWSAEND-----YALRGHGSYVYSATFFPDGDRIASAGWDD- 841

Query: 235  DILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQKDEAMD----IYSVDL 289
                  + D R  +   ++ +    ++ +      G+      +K    +    +   D 
Sbjct: 842  ---TARVWDARTGKEVLKLEHGNIGIVSSVAVHPGGQLIATLGRKHNDPNAVGGVRLWDA 898

Query: 290  QSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
             +        L+N  F +   ++SPD + +      +G+ +L+           + +   
Sbjct: 899  GTGKLLHVWPLSNADFRDSRVTFSPDGTLLA-AGTPDGRVRLW--DVATRRAAAVLEGHT 955

Query: 347  ASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSG 401
             +  D  +SP G  +A           +  +   G    +L   ++ +    A  W P+G
Sbjct: 956  FAVCDVAFSPDGKRLASAGHHRDGSVRVWDV-ATGKPLAVLKPGTDFRDGVLALAWHPNG 1014

Query: 402  RSLI 405
            + L 
Sbjct: 1015 KLLA 1018



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/309 (16%), Positives = 93/309 (30%), Gaps = 48/309 (15%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWDV   +     +   S              +Y +     GD           + S  
Sbjct: 802  RLWDVWSAENDYALRGHGS-------------YVYSATFFPDGD----------RIASAG 838

Query: 189  IKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              ++  V D R G  +  L      I+      P  Q +A       D   V  +     
Sbjct: 839  WDDTARVWDARTGKEVLKLEHGNIGIVSSVAVHPGGQLIATLGRKHNDPNAVGGVRLWDA 898

Query: 248  RAPKRIGNFRSMILAPR-----FSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTL 301
               K +  +       R     FS +G     +   D  + ++  D+ +  A   L    
Sbjct: 899  GTGKLLHVWPLSNADFRDSRVTFSPDGTLLA-AGTPDGRVRLW--DVATRRAAAVLEGHT 955

Query: 302  FINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDK---EASYFDPVWSPQ 357
            F     ++SPD  ++      R+G  +++           + +             W P 
Sbjct: 956  FAVCDVAFSPDGKRLASAGHHRDGSVRVW--DVATGKPLAVLKPGTDFRDGVLALAWHPN 1013

Query: 358  GDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            G L+A     G    +     K  G     L   S++    ++P G+ L        D  
Sbjct: 1014 GKLLAAGSSDGSVRLWEPATEKLLGE----LKHGSDVYGLAFTPDGKLLA---TGAADNL 1066

Query: 416  SKLYSIDLN 424
             +L+ +D +
Sbjct: 1067 IRLWHVDTH 1075



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 66/182 (36%), Gaps = 10/182 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+G   ++  V + +     +     D       FSP+  +VA A + + D         
Sbjct: 570 VTGSDDHTARVWNVESGRETHRLRVPDGTALPLVFSPDG-EVAGARWANADPPT--FWGV 626

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLFI 303
           R  R   RI      +   RFS +GKR + S    +   D++ V        RL      
Sbjct: 627 RTGRPVGRIDPRAEPMFEYRFSPDGKRIVSSGWHPQTAMDVWEVS-TGRRVARLEGHENQ 685

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQGD 359
             + ++SPD   +   S  +   +++ +  +   +KR    + +          ++P G 
Sbjct: 686 VSNTAFSPDGRLLASCS-MDRTVRVWDIGPDARGEKREAVHVLEGHTGWIQRVAFNPDGT 744

Query: 360 LI 361
            +
Sbjct: 745 RL 746



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 77/210 (36%), Gaps = 13/210 (6%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   VAYAT D      + L+D R  R  + +    + I   +F +NG+  + +   D  
Sbjct: 524 SGATVAYATDDHG----IALLDPRTGR-VRVMRGHTAEIRVIQFIANGRELV-TGSDDHT 577

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +++V+     T RL       +   +SPD                + +++ G    RI
Sbjct: 578 ARVWNVE-SGRETHRLRVPDGTALPLVFSPDGEVAGARWANADPPTFWGVRT-GRPVGRI 635

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
               E   F+  +SP G  I  + +       +  +       RL   ++ +    +SP 
Sbjct: 636 DPRAE-PMFEYRFSPDGKRIVSSGWHPQTAMDVWEVSTGRRVARLEGHENQVSNTAFSPD 694

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           GR L        D   +++ I  + R E  
Sbjct: 695 GRLLASCSM---DRTVRVWDIGPDARGEKR 721


>gi|166713928|ref|ZP_02245135.1| hypothetical protein Xoryp_21435 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 293

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 68/214 (31%), Gaps = 25/214 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATER----LTNTLFINI 305
           + +  +       S +G+R + +  +       D++   L+    +       NT     
Sbjct: 33  VVSTPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQNAQPLPINTAQDEA 92

Query: 306 SASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSP 356
           + ++S D   ++F S R    G   LY    +        Q      +   +   P  S 
Sbjct: 93  TPTFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSL 152

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLIFS 407
            G  + F            + V   DG      V   ++ +        W   GR+L+++
Sbjct: 153 DGTRLLFASDGHGGAGGMDLFVAHWDGRAFSQPVALVDINSAADELDAAWLGDGRALVWT 212

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R K       L +   +G     +  P   + PQ
Sbjct: 213 RGKTDGPSQLLLAACKDGHFAQGLPLPLSFNGPQ 246



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 59/170 (34%), Gaps = 24/170 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGS---DQKRISQDKEASYFDP 352
           +T      A+ SPD  +IV+ SDR    G   L+  Q  G    + + +  +       P
Sbjct: 35  STPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQNAQPLPINTAQDEATP 94

Query: 353 VWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQE--------RLLVEDSNLQAPTWSPSG 401
            +S  G  + F            +     D              +    N +APT S  G
Sbjct: 95  TFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSLDG 154

Query: 402 RSLIFSRK-KDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
             L+F+     G  G  L+    +GR  +       IN+ A   D  W+G
Sbjct: 155 TRLLFASDGHGGAGGMDLFVAHWDGRAFSQPVALVDINSAADELDAAWLG 204



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 22/168 (13%)

Query: 220 SPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ Q++ +A+         D+ +  L   R   A     N       P FS++G+  L 
Sbjct: 46  SPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQNAQPLPINTAQDEATPTFSADGRWLLF 105

Query: 275 SVQKDEAM---DIYSVDLQS----NATERL---TNTLFINISASYSPDSSQIVFESD--- 321
           +  +       D+Y   + +     A + +    N+     + + S D ++++F SD   
Sbjct: 106 ASTRPGGAGGSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSLDGTRLLFASDGHG 165

Query: 322 REGKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQGDLIAFTK 365
             G   L+V   +G    +    +  +  A   D  W   G  + +T+
Sbjct: 166 GAGGMDLFVAHWDGRAFSQPVALVDINSAADELDAAWLGDGRALVWTR 213



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 52/165 (31%), Gaps = 19/165 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--- 234
           +     G     L      G    N + L  +  Q    P FS + + + +A+       
Sbjct: 55  ASDRAGGAGGWDLWQAQLRGGRWQNAQPLPINTAQDEATPTFSADGRWLLFASTRPGGAG 114

Query: 235 --DILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEAM---DIYS 286
             D+ R  +    +  A + +G   N      AP  S +G R L +          D++ 
Sbjct: 115 GSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSLDGTRLLFASDGHGGAGGMDLFV 174

Query: 287 VDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREGKE 326
                 A  +       N+    + A++  D   +V+   +    
Sbjct: 175 AHWDGRAFSQPVALVDINSAADELDAAWLGDGRALVWTRGKTDGP 219


>gi|56752091|ref|YP_172792.1| hypothetical protein syc2082_d [Synechococcus elongatus PCC 6301]
 gi|81300822|ref|YP_401030.1| hypothetical protein Synpcc7942_2013 [Synechococcus elongatus PCC
           7942]
 gi|56687050|dbj|BAD80272.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81169703|gb|ABB58043.1| conserved hypothetical protein [Synechococcus elongatus PCC 7942]
          Length = 175

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 43/117 (36%), Gaps = 3/117 (2%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDREG 324
           +    +    +  + D Y   ++      L     +++     + S D + I F   R  
Sbjct: 52  DRSLLVFVSDRRGSRDAYLYSVEQRQQIPLPGLNSLDLLVEHPAISADGNWIAFAGSRGD 111

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           +  +Y+        + ++ D EA   +P  S  G  IAF    G ++ + V  +D  
Sbjct: 112 RTNIYLYDRRSQQLRNLTADLEAIVRNPSLSRDGQRIAFEAALGGQWDVLVYDRDAG 168



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 53/149 (35%), Gaps = 9/149 (6%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             A  + ++           N+ +  +  S   D S +VF SDR G    Y+       Q
Sbjct: 24  SGAPRLIALPSGDRGV----NSRYAELFPSLG-DRSLLVFVSDRRGSRDAYLYSVEQRQQ 78

Query: 339 KRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
             +            P  S  G+ IAF    G++  I +  +   Q R L  D  + ++ 
Sbjct: 79  IPLPGLNSLDLLVEHPAISADGNWIAFAGSRGDRTNIYLYDRRSQQLRNLTADLEAIVRN 138

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           P+ S  G+ + F     G     +Y  D 
Sbjct: 139 PSLSRDGQRIAFEAALGGQWDVLVYDRDA 167



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 4/119 (3%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALISVQKD 279
           ++  + + + D       YL      +     G  +   ++  P  S++G     +  + 
Sbjct: 52  DRSLLVFVS-DRRGSRDAYLYSVEQRQQIPLPGLNSLDLLVEHPAISADGNWIAFAGSRG 110

Query: 280 EAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +  +IY  D +S     LT     I  + S S D  +I FE+   G+  + V   +   
Sbjct: 111 DRTNIYLYDRRSQQLRNLTADLEAIVRNPSLSRDGQRIAFEAALGGQWDVLVYDRDAGP 169



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 45/132 (34%), Gaps = 4/132 (3%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y  +    GD   R L V  S   G     L  +++          S D ++  P  S +
Sbjct: 43  YAELFPSLGD---RSLLVFVSDRRGSRDAYLYSVEQRQQIPLPGLNSLDLLVEHPAISAD 99

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              +A+A     D   +YL D R  +      +  +++  P  S +G+R           
Sbjct: 100 GNWIAFAG-SRGDRTNIYLYDRRSQQLRNLTADLEAIVRNPSLSRDGQRIAFEAALGGQW 158

Query: 283 DIYSVDLQSNAT 294
           D+   D  +   
Sbjct: 159 DVLVYDRDAGPL 170


>gi|298243504|ref|ZP_06967311.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297556558|gb|EFH90422.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 517

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 79/219 (36%), Gaps = 19/219 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP- 263
           Y   S   ++++  +SP+ +++  A            M T      +    F     A  
Sbjct: 302 YAPLSGGVMIYDFAWSPDGKEIVAANPFHNGTSANESMVTWDVATQQIKTKFIGHTDAVN 361

Query: 264 --RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +GK    S   D  + ++  D +        +  +   + ++SP  ++ +    
Sbjct: 362 KIAWSPDGKYIA-SSAYDSTVRVW--DAKYGQEVYKLSGPY--AALAWSPTDAKRLLIGF 416

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G  +  +  +NG++  + S+          WSP G ++A    +G+   +   +KD  
Sbjct: 417 ANGTLE-SIDATNGANPLKYSEQVGLGISSVAWSPDGKMVA---AAGKGVKLFDAQKD-- 470

Query: 382 QERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSK 417
              L     N        WSP G+ +  +    G+ GS 
Sbjct: 471 -ALLYTYGGNADFIRCMAWSPDGKYIA-TGDNMGEGGSN 507



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 85/276 (30%), Gaps = 40/276 (14%)

Query: 115 RVIKEGKDRLRV-----EFRLWDVKDRKQIIGKKFFSSP--------ASWRKIAHTISDD 161
            V      R        +  +WD   +  +    +   P          +      +S  
Sbjct: 249 AVKWSPDGRYVASTFGGQILIWDPATKTILHKLTYPGVPVASTATGSGKYLNSYAPLSGG 308

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +         D    I+  +          S+   D     I+         + +  +SP
Sbjct: 309 VMIYDFAWSPDGKE-IVAANPFHNGTSANESMVTWDVATQQIKTKFIGHTDAVNKIAWSP 367

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDE 280
           + + +A + YD      V + D +  +   ++        A  +S  + KR LI      
Sbjct: 368 DGKYIASSAYDS----TVRVWDAKYGQEVYKLS---GPYAALAWSPTDAKRLLIGFA--- 417

Query: 281 AMDIYSVDLQSNA-----TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              + S+D  + A     +E++   L I  S ++SPD   +         + + +  +  
Sbjct: 418 NGTLESIDATNGANPLKYSEQV--GLGI-SSVAWSPDGKMVA-----AAGKGVKLFDAQ- 468

Query: 336 SDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEK 370
            D    +    A +     WSP G  IA     GE 
Sbjct: 469 KDALLYTYGGNADFIRCMAWSPDGKYIATGDNMGEG 504



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 70/238 (29%), Gaps = 48/238 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-----GNFRSMILAPRFSSNGKRA 272
            +S N +++A A+      L V L D    +    +       F   ILA ++S +G+  
Sbjct: 206 AWSKNSKRIASAS------LNVVLWDATTGKNSVVLDSNQGSQFSGSILAVKWSPDGRYV 259

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +        +           +LT                 +   +   GK       
Sbjct: 260 ASTF---GGQILIWDPATKTILHKLTYP------------GVPVASTATGSGKYLNSYAP 304

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFSGEKFAIGVMKKDGSQERL--L 386
            +G              +D  WSP G  I     F   +    ++        Q +   +
Sbjct: 305 LSGGVM----------IYDFAWSPDGKEIVAANPFHNGTSANESMVTWDVATQQIKTKFI 354

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                +    WSP G+ +  S     D+  +++     G+    ++ P  A    W  
Sbjct: 355 GHTDAVNKIAWSPDGKYIASSAY---DSTVRVWDAKY-GQEVYKLSGPYAAL--AWSP 406


>gi|269137364|ref|YP_003294064.1| periplasmic component of the Tol biopolymer transport system
           [Edwardsiella tarda EIB202]
 gi|267983024|gb|ACY82853.1| periplasmic component of the Tol biopolymer transport system
           [Edwardsiella tarda EIB202]
 gi|304557465|gb|ADM40129.1| Uncharacterized protein YidR [Edwardsiella tarda FL6-60]
          Length = 432

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 24/165 (14%)

Query: 280 EAMDIYSVDLQSNATERLT-----NTLFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                        +  RLT         +      +   +PD   + F   D  G  QL+
Sbjct: 276 GTGSTLPAPPAGVSQRRLTFTHSRRYPGLATLPRHWVRSAPDGGSLAFLMRDDNGVVQLW 335

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +  NG + ++++           W P G  +     +    ++            + E 
Sbjct: 336 RVSPNGGELRQVTHGGYDVQSAFNWHPDGRSVLMVMDN----SVVRCDVASGAVTRITER 391

Query: 390 S------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +      +   P  SP GR + + R+ +G   ++++   L   +E
Sbjct: 392 TAQPPCADAVIP--SPDGRWVAYMREVNG--WAQIFVARLTTDDE 432



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 12/136 (8%)

Query: 256 FRSMILAPR-F---SSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISA-SY 309
           +  +   PR +   + +G      ++ D   + ++ V        ++T+  +   SA ++
Sbjct: 301 YPGLATLPRHWVRSAPDGGSLAFLMRDDNGVVQLWRVSPNGGELRQVTHGGYDVQSAFNW 360

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFS 367
            PD   ++   D      +           RI++           + SP G  +A+ +  
Sbjct: 361 HPDGRSVLMVMDNS----VVRCDVASGAVTRITERTAQPPCADAVIPSPDGRWVAYMREV 416

Query: 368 GEKFAIGVMKKDGSQE 383
                I V +     E
Sbjct: 417 NGWAQIFVARLTTDDE 432



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 51/139 (36%), Gaps = 11/139 (7%)

Query: 207 TPSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +     +   PR     +P+   +A+   DD  +++++ +        +       +  A
Sbjct: 298 SRRYPGLATLPRHWVRSAPDGGSLAFLMRDDNGVVQLWRVSPNGGELRQVTHGGYDVQSA 357

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--INISASY-SPDSSQIVFE 319
             +  +G+  L+ +       +   D+ S A  R+T          A   SPD   + + 
Sbjct: 358 FNWHPDGRSVLMVMDNS----VVRCDVASGAVTRITERTAQPPCADAVIPSPDGRWVAYM 413

Query: 320 SDREGKEQLYVMQSNGSDQ 338
            +  G  Q++V +    D+
Sbjct: 414 REVNGWAQIFVARLTTDDE 432



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 34/100 (34%), Gaps = 3/100 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +  +G  +R +T     +     + P+ + V      D  ++R  +    + R  +
Sbjct: 333 QLWRVSPNGGELRQVTHGGYDVQSAFNWHPDGRSVL--MVMDNSVVRCDVASGAVTRITE 390

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           R         A   S +G+      + +    I+   L +
Sbjct: 391 RTAQPPCAD-AVIPSPDGRWVAYMREVNGWAQIFVARLTT 429


>gi|242241317|ref|YP_002989498.1| hypothetical protein Dd703_3923 [Dickeya dadantii Ech703]
 gi|242133374|gb|ACS87676.1| conserved hypothetical protein [Dickeya dadantii Ech703]
          Length = 427

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 69/180 (38%), Gaps = 35/180 (19%)

Query: 264 RFSSNGKRA--LISVQKDEAMDIYSV----DLQSNAT-----------ERLT-----NTL 301
             S++G++   +  V   E +D Y++     L   AT            RLT        
Sbjct: 241 TLSADGEKVPEVFIVDLPENLDDYAIAGEQPLGGTATALPAPPAGVCQRRLTFSAGRRYP 300

Query: 302 FINISAS-Y---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            +      +   +PD S I F   D +G  QL+++  NG + ++++Q          W P
Sbjct: 301 GVVNQPRHWLRAAPDGSAIAFLMRDDDGIVQLWILSPNGGEPRQVTQSAWPVQSAFSWHP 360

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL----QAPTWSPSGRSLIFSRKKDG 412
            G+ +AF        +I V +    +       S++     A  +SP G  + + R  DG
Sbjct: 361 GGEYVAFV----GDNSIMVCEMASGRVIRQTPRSDIPPVSDAVVFSPEGSRIAYLRDIDG 416



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 48/129 (37%), Gaps = 12/129 (9%)

Query: 256 FRSMILAPR-F---SSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISA-SY 309
           +  ++  PR +   + +G      ++ D   + ++ +        ++T + +   SA S+
Sbjct: 299 YPGVVNQPRHWLRAAPDGSAIAFLMRDDDGIVQLWILSPNGGEPRQVTQSAWPVQSAFSW 358

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFS 367
            P    + F     G   + V +       R +   +        V+SP+G  IA+ +  
Sbjct: 359 HPGGEYVAFV----GDNSIMVCEMASGRVIRQTPRSDIPPVSDAVVFSPEGSRIAYLRDI 414

Query: 368 GEKFAIGVM 376
                I V+
Sbjct: 415 DGCNQIFVV 423



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 51/124 (41%), Gaps = 7/124 (5%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +Q     R +P+   +A+   DD+ I++++++        +   +   +  A  +   G+
Sbjct: 304 NQPRHWLRAAPDGSAIAFLMRDDDGIVQLWILSPNGGEPRQVTQSAWPVQSAFSWHPGGE 363

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFI---NISASYSPDSSQIVFESDREGKEQ 327
                        I   ++ S    R T    I   + +  +SP+ S+I +  D +G  Q
Sbjct: 364 YVAFV----GDNSIMVCEMASGRVIRQTPRSDIPPVSDAVVFSPEGSRIAYLRDIDGCNQ 419

Query: 328 LYVM 331
           ++V+
Sbjct: 420 IFVV 423



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 3/98 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++  +G   R +T S   +     + P  + VA+    D  I+   +   R+ R   
Sbjct: 331 QLWILSPNGGEPRQVTQSAWPVQSAFSWHPGGEYVAFV--GDNSIMVCEMASGRVIRQTP 388

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           R  +   +  A  FS  G R       D    I+ V++
Sbjct: 389 R-SDIPPVSDAVVFSPEGSRIAYLRDIDGCNQIFVVEV 425



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 74/263 (28%), Gaps = 55/263 (20%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV------QKDEAM 282
               +E   +   +D  +  AP   G  R       FS +G R   +       ++D A+
Sbjct: 103 VMVQEETPEQAVTLDACVITAPYPAGALRGGTHVHVFSPDGSRLSFTYNDHVLHERDPAL 162

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNG- 335
           D+ +V         L +            D S       R       G + +      G 
Sbjct: 163 DLRNV----GVAVPLRSVAAPGRHPR-EHDGSHYCVLVSRTTPKPHPGSDDINRAYEEGW 217

Query: 336 -SDQKRISQDKEASYFDPVW-----SPQGDLI--AFTKFSGEKFAIGVM----------- 376
              Q  +  D     +   +     S  G+ +   F     E      +           
Sbjct: 218 VGVQGYLRPDGVRQRWALAFIGDTLSADGEKVPEVFIVDLPENLDDYAIAGEQPLGGTAT 277

Query: 377 ----KKDGSQERLLVEDSNLQAP-------TW---SPSGRSLIFSRKKDGDTGSKLYSID 422
                  G  +R L   +  + P        W   +P G ++ F   +D D   +L+ + 
Sbjct: 278 ALPAPPAGVCQRRLTFSAGRRYPGVVNQPRHWLRAAPDGSAIAFL-MRDDDGIVQLWILS 336

Query: 423 LNGRNETLINTPAYASDPQWVGF 445
            NG     +   A+   P    F
Sbjct: 337 PNGGEPRQVTQSAW---PVQSAF 356


>gi|322434219|ref|YP_004216431.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321161946|gb|ADW67651.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 695

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 64/187 (34%), Gaps = 16/187 (8%)

Query: 147 SPASWRKIAHTISDDIYQ-----SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
                    +  +D + +      +  + G     I       V    +    V D  G 
Sbjct: 496 GTDQLSFAINRGADWLEEAGLRSRLISQHGPLPGTIDQARSPFVPADGQGLAYVRDDHGR 555

Query: 202 NIRYLTPSRDQILFEPRF-------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
              YL  S  +    P +       S     +A A    E+  +++L+      +P  +G
Sbjct: 556 GRVYLHLSTYEKPLTPLWMSVLEGASAKDGIMAVAATQGEEASQIFLLQPGGVPSPSGLG 615

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             R     P FS +G     S   + A +++ +D  +     LT      + AS+ PDS 
Sbjct: 616 EARY----PAFSPDGHWLAYSRLVNGAWNLWLLDRHTQRAHPLTEAPCDQVEASWEPDSK 671

Query: 315 QIVFESD 321
            +++ SD
Sbjct: 672 TLLYASD 678



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 68/190 (35%), Gaps = 7/190 (3%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   ++++A     D L    + +R+      +        +P   ++G+          
Sbjct: 495 PGTDQLSFAINRGADWLEEAGLRSRLISQHGPLPGTIDQARSPFVPADGQGLAYVRDDHG 554

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              +Y     S   + LT      +  + + D    V  +  E   Q++++Q  G     
Sbjct: 555 RGRVYL--HLSTYEKPLTPLWMSVLEGASAKDGIMAVAATQGEEASQIFLLQPGGVP--- 609

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSP 399
            S         P +SP G  +A+++     + + ++ +   +   L E   +    +W P
Sbjct: 610 -SPSGLGEARYPAFSPDGHWLAYSRLVNGAWNLWLLDRHTQRAHPLTEAPCDQVEASWEP 668

Query: 400 SGRSLIFSRK 409
             ++L+++  
Sbjct: 669 DSKTLLYASD 678



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 62/182 (34%), Gaps = 12/182 (6%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDRE 323
               +   ++ +  A  +    L+S    +   L  T+    S     D   + +  D  
Sbjct: 495 PGTDQLSFAINR-GADWLEEAGLRSRLISQHGPLPGTIDQARSPFVPADGQGLAYVRDDH 553

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G+ ++Y+     + +K ++     S  +   +  G +        E   I +++  G   
Sbjct: 554 GRGRVYLHL--STYEKPLTPL-WMSVLEGASAKDGIMAVAATQGEEASQIFLLQPGGVPS 610

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQW 442
                    + P +SP G  L +SR  +G     L+ +D +  R   L   P    +  W
Sbjct: 611 --PSGLGEARYPAFSPDGHWLAYSRLVNGAW--NLWLLDRHTQRAHPLTEAPCDQVEASW 666

Query: 443 VG 444
             
Sbjct: 667 EP 668


>gi|154310124|ref|XP_001554394.1| hypothetical protein BC1G_06982 [Botryotinia fuckeliana B05.10]
 gi|150851543|gb|EDN26736.1| hypothetical protein BC1G_06982 [Botryotinia fuckeliana B05.10]
          Length = 931

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 74/196 (37%), Gaps = 21/196 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQQKV--AYA 229
           V +++ +     +L     D    R+   SR  I   P         F+P +  +   + 
Sbjct: 678 VPDTLATANKSPNLYGFIHD--AKRFALYSRSVIEQAPLQSYCSALVFAPQKSIIRTTFE 735

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                 I +  +++   +   + +    S + +  FS +GK+ ++S   D  + ++  D 
Sbjct: 736 KCIPPWIQKKPIVEPYWNAMLQTLEGHASSVNSVAFSPDGKQ-VVSGSDDNTVRLW--DT 792

Query: 290 QSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +    + T  +      S ++SPD  QIV  SD    + + +  +    Q + +     
Sbjct: 793 ATGQQIQPTLEDHTDSVRSVAFSPDGKQIVSGSD---DKTVRLWDTATGQQIQPTLGGHT 849

Query: 348 SYFDP-VWSPQGDLIA 362
           +  +   +SP G  + 
Sbjct: 850 NSVNSVAFSPDGKKVV 865



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 10/102 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKF 366
           ++SPD  Q+V  SD      + +  +    Q + + +D   S     +SP G  I     
Sbjct: 770 AFSPDGKQVVSGSD---DNTVRLWDTATGQQIQPTLEDHTDSVRSVAFSPDGKQIVSGSD 826

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLI 405
                 + +      Q+       +   + +  +SP G+ ++
Sbjct: 827 DKT---VRLWDTATGQQIQPTLGGHTNSVNSVAFSPDGKKVV 865



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 11/100 (11%), Positives = 31/100 (31%), Gaps = 11/100 (11%)

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPT 396
           +  +   +S     +SP G  +           + +      Q+          ++++  
Sbjct: 757 QTLEGHASSVNSVAFSPDGKQVVSGSDDNT---VRLWDTATGQQIQPTLEDHTDSVRSVA 813

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           +SP G+ ++       D   +L+  D     +       +
Sbjct: 814 FSPDGKQIVSGSD---DKTVRLW--DTATGQQIQPTLGGH 848


>gi|124267380|ref|YP_001021384.1| hypothetical protein Mpe_A2193 [Methylibium petroleiphilum PM1]
 gi|124260155|gb|ABM95149.1| conserved hypothetical protein [Methylibium petroleiphilum PM1]
          Length = 674

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/275 (16%), Positives = 84/275 (30%), Gaps = 22/275 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR- 238
           V      G     L  +D  G     L    DQ      +     ++ Y     +     
Sbjct: 125 VFSRSPGGNEAEQLYRLDA-GKRQPTLLTDPDQRHDAIGWLHQSAQLLYTAVPLDRTAEG 183

Query: 239 ---------VYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAM-DIYSV 287
                    ++L+D     + +RI             S + K+  I+  +      ++ +
Sbjct: 184 GSRATPTTTLWLVDPLQPSSRRRIAELPGTGWFGGEISRDDKQLAITRYRSATDSQVWLI 243

Query: 288 DLQSNATERLTNTLFINISAS-----YSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRI 341
           DL      +L   +   + A+     YSPD + +   SDR G+ + L           R+
Sbjct: 244 DLADGTPTQLLPAVGEPLQATHFPVGYSPDGASLYVLSDRAGEFRELMRYDFASRALTRL 303

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSP 399
           +            S  G L A       +  + V+     +ER L       + A  + P
Sbjct: 304 TAAIPWDVGAAQLSDDGALAALKMNVDGREELRVVDTRTLRERALPALPAGGVNAVRFQP 363

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               L  +       G +L ++D++         P
Sbjct: 364 RTHRLAVAIDSAQGPG-RLLALDVDRGTVQPWTRP 397



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 78/236 (33%), Gaps = 23/236 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN-GKRALISVQ 277
           + P + ++  +                   AP  + +F   +    +    G+  + S  
Sbjct: 70  WHPARDEMLVSHRPAGANTAQLFRVPGPLAAPVALTDFADPVTEASYEPVLGRYLVFSRS 129

Query: 278 KDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-----------SDREG 324
                   +Y +D        LT+    + +  +   S+Q+++            S    
Sbjct: 130 PGGNEAEQLYRLDAGKRQPTLLTDPDQRHDAIGWLHQSAQLLYTAVPLDRTAEGGSRATP 189

Query: 325 KEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKK-DGS 381
              L+++     S ++RI++     +F    S     +A T+  S     + ++   DG+
Sbjct: 190 TTTLWLVDPLQPSSRRRIAELPGTGWFGGEISRDDKQLAITRYRSATDSQVWLIDLADGT 249

Query: 382 QERLLVEDS----NLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +LL            P  +SP G SL     + G+   +L   D   R  T + 
Sbjct: 250 PTQLLPAVGEPLQATHFPVGYSPDGASLYVLSDRAGEF-RELMRYDFASRALTRLT 304



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 68/195 (34%), Gaps = 6/195 (3%)

Query: 180 VSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQI---LFEPRFSPNQQKVAYATYDDED 235
           ++ +       + + ++D  DG   + L    + +    F   +SP+   +   +    +
Sbjct: 227 LAITRYRSATDSQVWLIDLADGTPTQLLPAVGEPLQATHFPVGYSPDGASLYVLSDRAGE 286

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +   D       +        + A + S +G  A + +  D   ++  VD ++    
Sbjct: 287 FRELMRYDFASRALTRLTAAIPWDVGAAQLSDDGALAALKMNVDGREELRVVDTRTLRER 346

Query: 296 RLTNTLFINISA-SYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            L       ++A  + P + ++    D  +G  +L  +  +    +  ++       D  
Sbjct: 347 ALPALPAGGVNAVRFQPRTHRLAVAIDSAQGPGRLLALDVDRGTVQPWTRPHVPPGLDTT 406

Query: 354 WSPQGDLIAFTKFSG 368
             P   ++ +T F G
Sbjct: 407 SFPDQRIVRWTSFDG 421



 Score = 36.9 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 20/39 (51%)

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           GR L+FSR   G+   +LY +D   R  TL+  P    D
Sbjct: 121 GRYLVFSRSPGGNEAEQLYRLDAGKRQPTLLTDPDQRHD 159


>gi|296284854|ref|ZP_06862852.1| prolyl oligopeptidase family protein [Citromicrobium bathyomarinum
           JL354]
          Length = 671

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 60/166 (36%), Gaps = 22/166 (13%)

Query: 264 RFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTN-TLFINISASYSPDSS- 314
            +S +GK      ++ +A        DIYS  +   A   LT+     + + + SPD   
Sbjct: 216 AWSPDGKTLYFVARESDAAEPTSTDTDIYSFTMGDTAPASLTDANQATDGTPAPSPDGKW 275

Query: 315 -------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
                  +  +E+DR    ++ +      + + ++QD + S+    W+P    I  T   
Sbjct: 276 LAYLAMERPAYEADRL---RIMLRDLATGETRALTQDFDRSFGSLAWTPDSRWIVATAQD 332

Query: 368 GEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSP-SGRSLIFSRKK 410
                   +           L+  +       +P  G+ L+F+R  
Sbjct: 333 VLDTPAFRIDPRTGTVTKLDLMPGNEAHIGNVTPLDGQRLLFTRDS 378



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 50/146 (34%), Gaps = 6/146 (4%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRS 258
              LT +       P  SP+ + +AY   +      D LR+ L D           +F  
Sbjct: 253 PASLTDANQATDGTPAPSPDGKWLAYLAMERPAYEADRLRIMLRDLATGETRALTQDFDR 312

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSP-DSSQI 316
              +  ++ + +  + + Q       + +D ++    +L           + +P D  ++
Sbjct: 313 SFGSLAWTPDSRWIVATAQDVLDTPAFRIDPRTGTVTKLDLMPGNEAHIGNVTPLDGQRL 372

Query: 317 VFESDREGKEQLYVMQSNGSDQKRIS 342
           +F  D         +  N  +  R++
Sbjct: 373 LFTRDSIAAPAEVYLSRNWGEADRLT 398



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 61/184 (33%), Gaps = 14/184 (7%)

Query: 218 RFSPNQQKVAYATYDDEDI------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +SP+ + + +   + +          +Y                ++    P  S +GK 
Sbjct: 216 AWSPDGKTLYFVARESDAAEPTSTDTDIYSFTMGDTAPASLTDANQATDGTPAPSPDGKW 275

Query: 272 ALI-SVQKD----EAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGK 325
               ++++     + + I   DL +  T  LT     +  S +++PDS  IV  +     
Sbjct: 276 LAYLAMERPAYEADRLRIMLRDLATGETRALTQDFDRSFGSLAWTPDSRWIVATAQDVLD 335

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFS-GEKFAIGVMKKDGSQE 383
              + +        ++             +P  G  + FT+ S      + + +  G  +
Sbjct: 336 TPAFRIDPRTGTVTKLDLMPGNEAHIGNVTPLDGQRLLFTRDSIAAPAEVYLSRNWGEAD 395

Query: 384 RLLV 387
           RL  
Sbjct: 396 RLTS 399



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 60/180 (33%), Gaps = 29/180 (16%)

Query: 293 ATERLTNTLFINISASYSPDSSQIV-FESDREGKEQLYVMQSNGS--DQKRISQDKEASY 349
              +LT  +        SP+   +  F +   G  Q     +  +     R+  +++   
Sbjct: 103 QVTQLTREVG---GFEVSPNGESLAIFGNVPRGCAQFDCPDATTTATGSGRLYDNEDGFV 159

Query: 350 -FDPVW-SPQ--GDLIAFTKFSG--EKFAIGVMKKDGSQE----RLLVEDSNLQAPTWSP 399
                W +P     +  F    G      + V   DG         L     L+   WSP
Sbjct: 160 RHWDTWETPDVFSRVFVFPLSGGKARGPGVAVDGPDGEGALVGDTPLQPFGGLEDMAWSP 219

Query: 400 SGRSLIFSRKKDG-----DTGSKLYS--------IDLNGRNETLINTPAYASDPQWVGFM 446
            G++L F  ++        T + +YS          L   N+    TPA + D +W+ ++
Sbjct: 220 DGKTLYFVARESDAAEPTSTDTDIYSFTMGDTAPASLTDANQATDGTPAPSPDGKWLAYL 279


>gi|239932848|ref|ZP_04689801.1| WD40 domain-containing protein [Streptomyces ghanaensis ATCC 14672]
          Length = 399

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 45/282 (15%), Positives = 87/282 (30%), Gaps = 49/282 (17%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            +      P  S +  +VA+ T D        +   R +     +    S   AP  S N
Sbjct: 91  DKGAPYTAPSLSADGTRVAFPTLDGTRAHVYDVRTGRTEPVSDGVHARFSNANAPLISGN 150

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---------ISASYSPDSSQIVFE 319
           G+    + +  E     S+ ++     R T     +            S S D   + + 
Sbjct: 151 GRYVTFTARPTEDAAERSL-IRLRDLRRGTGEWLDDPLAGEEQRVARPSLSHDGRHVAYL 209

Query: 320 SDREGKE-------QLYVMQSNGSDQKRISQD-----KEASYFDPVWSPQGDLIAFT--- 364
           +   G +        +Y +     ++ R+  +      E    DPV SP G  + F    
Sbjct: 210 ASDPGADAPEDREAHVYALDRRTDERVRVDPECVDDPAERGVDDPVMSPDGRHVVFRLTC 269

Query: 365 -----KFSGEKFAIGVMKKDGSQERLL--------VEDSNLQAPTWSPSGRSLIFSRKKD 411
                + + +   + +        R +             L     S  GR + F   ++
Sbjct: 270 RTLRPRGTNDTGDVFLKDLRSGTLRHILGPKPQFATHTGRL-----SADGRHIAFVAAEE 324

Query: 412 GDTGS---KLYSIDL-NGRNETLINTPAYASD--PQWVGFMD 447
            +       +Y +DL  GR + +   P   ++  P     +D
Sbjct: 325 REPRGPLQVIYLLDLRTGRTDMVTARPDGTANQRPASGPTLD 366



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 73/209 (34%), Gaps = 34/209 (16%)

Query: 264 RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATER---LTNTL---FINISASY 309
             S++G+      +         D+  D+Y  DL++        LT+ +       + S 
Sbjct: 42  AISADGRYVAFWSRASNLAPGDTDDVHDVYVKDLRTGRVHWASDLTDGMDKGAPYTAPSL 101

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD---KEASYFDPVWSPQGDLIAFTKF 366
           S D +++ F +    +  +Y         + +S     + ++   P+ S  G  + FT  
Sbjct: 102 SADGTRVAFPTLDGTRAHVY--DVRTGRTEPVSDGVHARFSNANAPLISGNGRYVTFTAR 159

Query: 367 ----SGEKFAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDG----- 412
               + E+  I +          L +    +      P+ S  GR + +     G     
Sbjct: 160 PTEDAAERSLIRLRDLRRGTGEWLDDPLAGEEQRVARPSLSHDGRHVAYLASDPGADAPE 219

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           D  + +Y++D    +E +   P    DP 
Sbjct: 220 DREAHVYALDRR-TDERVRVDPECVDDPA 247



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 29/169 (17%)

Query: 307 ASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQ-----DKEASYFDPV 353
           A+ S D   + F S        D +    +YV           S      DK A Y  P 
Sbjct: 41  AAISADGRYVAFWSRASNLAPGDTDDVHDVYVKDLRTGRVHWASDLTDGMDKGAPYTAPS 100

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRK- 409
            S  G  +AF    G +  +  ++   ++     +    SN  AP  S +GR + F+ + 
Sbjct: 101 LSADGTRVAFPTLDGTRAHVYDVRTGRTEPVSDGVHARFSNANAPLISGNGRYVTFTARP 160

Query: 410 ------------KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                       +D   G+  +  D     E  +  P+ + D + V ++
Sbjct: 161 TEDAAERSLIRLRDLRRGTGEWLDDPLAGEEQRVARPSLSHDGRHVAYL 209


>gi|149278223|ref|ZP_01884361.1| dipeptidyl-peptidase [Pedobacter sp. BAL39]
 gi|149230989|gb|EDM36370.1| dipeptidyl-peptidase [Pedobacter sp. BAL39]
          Length = 795

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 62/161 (38%), Gaps = 15/161 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GK 325
           +  R     +      +Y  DL+S   ++LT+  +       S D     F +++E  G 
Sbjct: 405 DDNRIYFQSEASGYSHLYLADLRSGKKKQLTSGKWEVQQLQLSKDKRTFYFIANKEHPGI 464

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVM-KKDGSQE 383
              Y +   G    R++  +  +  + + SP    +A    +  + + + V   K G++ 
Sbjct: 465 THFYKIGVEGGAPLRLTNMRGGN--EVLLSPDEQWLAVRYSYMDKPWELYVQRNKAGAKA 522

Query: 384 RLLVEDSNLQAPTWSPSGRS-----LIFSRKKDGDTGSKLY 419
             + + ++ +   +    +      ++F  +   D  +++Y
Sbjct: 523 VQVTQSTSAEFNAY----KWRQPELVLFRNRYGADVYARVY 559


>gi|290960958|ref|YP_003492140.1| hypothetical protein SCAB_66001 [Streptomyces scabiei 87.22]
 gi|260650484|emb|CBG73600.1| putative secreted protein [Streptomyces scabiei 87.22]
          Length = 417

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 72/241 (29%), Gaps = 39/241 (16%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMIL 261
           T   +    +P  S + + VA+ +         D+       T      +R+        
Sbjct: 50  TTGGNNHSTDPVVSADGRVVAFLSSATNLGSGTDVRNSVYYRTGPGEPLRRVVVPGETTS 109

Query: 262 APRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFINISASY-----SPDSS 314
            P+ S +G+               +Y +DL +   +RL   L     ASY     S D  
Sbjct: 110 TPQLSDSGRYLTFGSYAVATATSSVYVMDLSTGDAQRLAPALPDGYQASYGIAPISADGR 169

Query: 315 QIVFESD-----REGKEQLYVM--QSNGSDQKRISQDKEASYFDP--------VWSPQGD 359
            + F +        G     VM         +R+S+  + S              S  G 
Sbjct: 170 YVAFVARPAVDPESGAFSCRVMLLDRKTGAVRRVSRTSDGSGGSKNFHRCEQISISADGR 229

Query: 360 LIAFTKFSGE-----KFAIGVMKKDGSQERL--LVEDS-----NLQAPTWSPSGRSLIFS 407
            +A+ +         +  I V  +   +     +  D      +  AP  S  G  + F+
Sbjct: 230 KVAYLEGYSGPAPDDQGDILVYDRRSGRTVQADVTHDGAAASTSAVAPVLSADGSKVAFN 289

Query: 408 R 408
            
Sbjct: 290 S 290



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 57/200 (28%), Gaps = 30/200 (15%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------DEAMDIYSVDLQSNATERL 297
           RI  AP       +    P  S++G+               D    +Y          R+
Sbjct: 42  RISVAPDGTTGGNNHSTDPVVSADGRVVAFLSSATNLGSGTDVRNSVYYRTGPGEPLRRV 101

Query: 298 TNTLFINISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRISQ----DKEASYFD 351
                   +   S     + F S         +YVM  +  D +R++       +ASY  
Sbjct: 102 VVPGETTSTPQLSDSGRYLTFGSYAVATATSSVYVMDLSTGDAQRLAPALPDGYQASYGI 161

Query: 352 PVWSPQGDLIAFTKF-----SGEKFAIGVMKKD--GSQERLLVEDSN----------LQA 394
              S  G  +AF            F+  VM  D      R +   S+           + 
Sbjct: 162 APISADGRYVAFVARPAVDPESGAFSCRVMLLDRKTGAVRRVSRTSDGSGGSKNFHRCEQ 221

Query: 395 PTWSPSGRSLIFSRKKDGDT 414
            + S  GR + +     G  
Sbjct: 222 ISISADGRKVAYLEGYSGPA 241



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 70/237 (29%), Gaps = 44/237 (18%)

Query: 219 FSPNQQKVAYATYDDEDIL------RVYLMDTRIDRAPKRIGNFRSMILAPRF------- 265
            S + + VA+      D        RV L+D +     +          +  F       
Sbjct: 164 ISADGRYVAFVARPAVDPESGAFSCRVMLLDRKTGAVRRVSRTSDGSGGSKNFHRCEQIS 223

Query: 266 -SSNGKRALI-----SVQKDEAMDIYSVDLQSNATER--LTNTLFIN----ISASYSPDS 313
            S++G++            D+  DI   D +S  T +  +T+         ++   S D 
Sbjct: 224 ISADGRKVAYLEGYSGPAPDDQGDILVYDRRSGRTVQADVTHDGAAASTSAVAPVLSADG 283

Query: 314 SQIVFES---------DREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAF 363
           S++ F S         D       +V        KR      A        S  G  +  
Sbjct: 284 SKVAFNSMATNLVPQPDTNNGWNAFVRDLRTGTLKRYDGHNPADLTLVSDLSRDGSKLLL 343

Query: 364 TKFSGEKFAIGVMKKD--GSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDG 412
                 +  +G++ +D    QE LL        P        S    +++F     G
Sbjct: 344 NTADANRSTLGLILRDLCTGQEELL-SPGQDGRPLTVGKAALSADESTVVFDSYYPG 399



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 8/99 (8%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKF-----SGEKFAIGVMKKDGSQE---RLLVEDSNLQ 393
           +        DPV S  G ++AF        SG      V  + G  E   R++V      
Sbjct: 50  TTGGNNHSTDPVVSADGRVVAFLSSATNLGSGTDVRNSVYYRTGPGEPLRRVVVPGETTS 109

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            P  S SGR L F         S +Y +DL+  +   + 
Sbjct: 110 TPQLSDSGRYLTFGSYAVATATSSVYVMDLSTGDAQRLA 148


>gi|188578998|ref|YP_001915927.1| hypothetical protein PXO_02820 [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188523450|gb|ACD61395.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 263

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 68/214 (31%), Gaps = 25/214 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATER----LTNTLFINI 305
           + +  +       S +G+R + +  +       D++   L+    +       NT     
Sbjct: 3   VVSTPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQNALPLPINTAQDET 62

Query: 306 SASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSP 356
           + ++S D   ++F S R    G   LY    +        Q      +   +   P  S 
Sbjct: 63  TPTFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSL 122

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLIFS 407
            G  + F            + V   DG      V   ++ +        W   GR+L+++
Sbjct: 123 DGMRLLFASDGHGGAGGMDLFVAHWDGKAFSQPVALVDINSAADELDAAWLGDGRALVWT 182

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R K       L +   +G     +  P   + PQ
Sbjct: 183 RGKTDGPSQLLLATCKDGHFAQGLPLPLSFNGPQ 216



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 58/170 (34%), Gaps = 24/170 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGS---DQKRISQDKEASYFDP 352
           +T      A+ SPD  +IV+ SDR    G   L+  Q  G    +   +  +       P
Sbjct: 5   STPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQNALPLPINTAQDETTP 64

Query: 353 VWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQE--------RLLVEDSNLQAPTWSPSG 401
            +S  G  + F            +     D              +    N +APT S  G
Sbjct: 65  TFSADGRWLLFASTRPGGAGGSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSLDG 124

Query: 402 RSLIFSRK-KDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
             L+F+     G  G  L+    +G+  +       IN+ A   D  W+G
Sbjct: 125 MRLLFASDGHGGAGGMDLFVAHWDGKAFSQPVALVDINSAADELDAAWLG 174



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 22/168 (13%)

Query: 220 SPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ Q++ +A+         D+ +  L   R   A     N       P FS++G+  L 
Sbjct: 16  SPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQNALPLPINTAQDETTPTFSADGRWLLF 75

Query: 275 SVQKDEAM---DIYSVDLQS----NATERL---TNTLFINISASYSPDSSQIVFESD--- 321
           +  +       D+Y   + +     A + +    N+     + + S D  +++F SD   
Sbjct: 76  ASTRPGGAGGSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSLDGMRLLFASDGHG 135

Query: 322 REGKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQGDLIAFTK 365
             G   L+V   +G    +    +  +  A   D  W   G  + +T+
Sbjct: 136 GAGGMDLFVAHWDGKAFSQPVALVDINSAADELDAAWLGDGRALVWTR 183



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 51/165 (30%), Gaps = 19/165 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTP---SRDQILFEPRFSPNQQKVAYATYDDE--- 234
           +     G     L      G   +   P   +  Q    P FS + + + +A+       
Sbjct: 25  ASDRAGGAGGWDLWQAQLRGGRWQNALPLPINTAQDETTPTFSADGRWLLFASTRPGGAG 84

Query: 235 --DILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEAM---DIYS 286
             D+ R  +    +  A + +G   N      AP  S +G R L +          D++ 
Sbjct: 85  GSDLYRAPVDAQGVVGAVQSVGTAINSAGNERAPTLSLDGMRLLFASDGHGGAGGMDLFV 144

Query: 287 VDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREGKE 326
                 A  +       N+    + A++  D   +V+   +    
Sbjct: 145 AHWDGKAFSQPVALVDINSAADELDAAWLGDGRALVWTRGKTDGP 189


>gi|119489257|ref|ZP_01622064.1| WD40-like Beta Propeller protein [Lyngbya sp. PCC 8106]
 gi|119454731|gb|EAW35876.1| WD40-like Beta Propeller protein [Lyngbya sp. PCC 8106]
          Length = 176

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 12/146 (8%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            +  +    + ++      N+      A  +     IVF SDR G++ +Y+      +Q 
Sbjct: 23  GSPRLIKYPVDTHEMSL--NSPAAEFDAQIT--DRYIVFASDRRGRQDIYLYDRQ--EQA 76

Query: 340 RISQDK----EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA- 394
            I        +     P+ S +G  IAF    G++  I +  ++  Q R L ++   +  
Sbjct: 77  LIDLPGLNRLDMIASAPLISREGQYIAFQGTRGKQSDIYLYNRETRQLRNLTQNLQAEVR 136

Query: 395 -PTWSPSGRSLIFSRKKDGDTGSKLY 419
            PT S  G  + F    +G     +Y
Sbjct: 137 NPTMSGEGGMIAFESSVNGQWDILVY 162



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 9/122 (7%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI------SASYSPDSSQIVFESDRE 323
           +  + +  +    DIY  D      + L +   +N       +   S +   I F+  R 
Sbjct: 53  RYIVFASDRRGRQDIYLYD---RQEQALIDLPGLNRLDMIASAPLISREGQYIAFQGTRG 109

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            +  +Y+        + ++Q+ +A   +P  S +G +IAF      ++ I V  + G   
Sbjct: 110 KQSDIYLYNRETRQLRNLTQNLQAEVRNPTMSGEGGMIAFESSVNGQWDILVYNRYGQPL 169

Query: 384 RL 385
            L
Sbjct: 170 NL 171



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 53/144 (36%), Gaps = 16/144 (11%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQ----KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           I+Y   + +  L  P    + Q     + +A+ D      +YL D    R  + + +   
Sbjct: 28  IKYPVDTHEMSLNSPAAEFDAQITDRYIVFAS-DRRGRQDIYLYD----RQEQALIDLPG 82

Query: 259 MI------LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSP 311
           +        AP  S  G+       + +  DIY  + ++     LT  L   + + + S 
Sbjct: 83  LNRLDMIASAPLISREGQYIAFQGTRGKQSDIYLYNRETRQLRNLTQNLQAEVRNPTMSG 142

Query: 312 DSSQIVFESDREGKEQLYVMQSNG 335
           +   I FES   G+  + V    G
Sbjct: 143 EGGMIAFESSVNGQWDILVYNRYG 166



 Score = 40.8 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 25/88 (28%), Gaps = 1/88 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               D I   P  S   Q +A+     +    +YL +    +      N ++ +  P  S
Sbjct: 83  LNRLDMIASAPLISREGQYIAFQGTRGKQS-DIYLYNRETRQLRNLTQNLQAEVRNPTMS 141

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT 294
             G         +   DI   +      
Sbjct: 142 GEGGMIAFESSVNGQWDILVYNRYGQPL 169


>gi|126179160|ref|YP_001047125.1| Ig domain-containing protein [Methanoculleus marisnigri JR1]
 gi|125861954|gb|ABN57143.1| Ig domain protein, group 2 domain protein [Methanoculleus
           marisnigri JR1]
          Length = 1279

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 80/234 (34%), Gaps = 28/234 (11%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N  K  Y    DE   +  L  TR+    +RI +  +    P  S  G   +    ++  
Sbjct: 59  NGNKDIYFGTVDEFRNKPPLTTTRVG---ERITSDDASQEKPSIS--GDYIVWQDDRNGN 113

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSP--DSSQIVFESDREGKEQLYVMQSNGSDQK 339
            DIY     +    +LT     +    + P    + + +  D  G  ++ +        K
Sbjct: 114 WDIYLYQRSTGEETQLTT----DTGDQWLPIVRGNYVAWYDDSSGDTKIVLYDIAAGAVK 169

Query: 340 -------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                  + +    A+   P  S     +A+ + + E+     +  D ++ ++       
Sbjct: 170 ATIDADAKTTIPDGATGVKPALS--EKYVAWIEKADERAWYYDI-ADETKMQVSGTGLRH 226

Query: 393 QAPTWSPSGRSLIF--SRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDPQ 441
             P+    G  + +     + G    ++Y +DL+   G  + + N P Y   P 
Sbjct: 227 SWPSL--YGSQIAWECYLNRSGIQDPEIYLMDLDNPSGGEQQITNAPNYQVSPA 278



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 55/141 (39%), Gaps = 19/141 (13%)

Query: 312 DSSQIVFESDREGKEQLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDLI 361
           D   IV+E DR G + +Y    +              +RI+ D +AS   P  S  GD I
Sbjct: 48  DGDMIVWEDDRNGNKDIYFGTVDEFRNKPPLTTTRVGERITSD-DASQEKPSIS--GDYI 104

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGRSLIFSRKKDGDTGSKLY 419
            +       + I + ++   +E  L  D+  Q   W P   G  + +     GDT   LY
Sbjct: 105 VWQDDRNGNWDIYLYQRSTGEETQLTTDTGDQ---WLPIVRGNYVAWYDDSSGDTKIVLY 161

Query: 420 SIDLNGRNETLINTPAYASDP 440
            I   G  +  I+  A  + P
Sbjct: 162 DI-AAGAVKATIDADAKTTIP 181



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 58/155 (37%), Gaps = 12/155 (7%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDE--AMD 283
           Y  + ++   R +  D   +   +  G          +   G +      + +      +
Sbjct: 195 YVAWIEKADERAWYYDIADETKMQVSGTGLRHSWPSLY---GSQIAWECYLNRSGIQDPE 251

Query: 284 IYSVDLQ--SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           IY +DL   S   +++TN     +S + S +   I +E  ++G   +Y+       ++  
Sbjct: 252 IYLMDLDNPSGGEQQITNAPNYQVSPALSEN--IIAWEDMQDGPRGIYMYDLATGGEEMS 309

Query: 342 SQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIGV 375
               E  Y + ++ +  G+ I + + +G    I +
Sbjct: 310 VFAPEDIYDEQLYPAASGNTIVWQRGTGINSNIYI 344


>gi|254411470|ref|ZP_05025247.1| hypothetical protein MC7420_1961 [Microcoleus chthonoplastes PCC
           7420]
 gi|196181971|gb|EDX76958.1| hypothetical protein MC7420_1961 [Microcoleus chthonoplastes PCC
           7420]
          Length = 1163

 Score = 65.8 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 115/319 (36%), Gaps = 36/319 (11%)

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSI-----TGEKGDFNSRILFVSESVVSGIIKN 191
           + I GK+          +  + +D I + +        + D +   +   +    G    
Sbjct: 522 QAIRGKQQLKGWQRVNPVVQSQADAILERVVLNIHQRNRLDGHEAAVLTVDISPDGQTIA 581

Query: 192 S------LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +      L + +RDG  +     + +  +   +F+P+ Q +A    D +    ++L  T 
Sbjct: 582 TAGVDTMLKLWNRDGK-LLSTFKAHEATIRVVKFTPDGQFLATGAGDGK----IHLW-TP 635

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R  + I      I    FS +G+  + +V +   M+ + +D      E L       +
Sbjct: 636 SGRLKRTIKTHLKAIWDLAFSPDGQTLV-AVGRPSIMEFWQID--GTPIEHLKIKSSGGL 692

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S  Y+P  +Q+       G +    +      +++I    +A      +SP G+ +    
Sbjct: 693 SVKYNPQGNQVA----VGGNDGTVTLFHPDEQRQQIINAHQAEINALAFSPDGERLVTGS 748

Query: 366 FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  I + +KDG   + L    + +    ++P G++ +       D    L++    
Sbjct: 749 QDQT---IKLWRKDGKLLKTLTHHSAGIIDIDFNPDGQTFVAGSH---DKTLSLWT---- 798

Query: 425 GRNETLINTPAYASDPQWV 443
            R+ TL+NT        W 
Sbjct: 799 -RHGTLLNTFKGHQSAIWG 816



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 83/243 (34%), Gaps = 23/243 (9%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                           +  +S + Q++   T D ++++     D  I     +    R++ 
Sbjct: 842  HPFHQTVHGAGGKALKAIYSHDGQRLV-TTGDQDNLVLTSTSDLTIKSLDSQQAVVRNLS 900

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            L P      +  ++S   D+ ++I  +D      + + +   + + A + P   +IV   
Sbjct: 901  LHPT-----QELVLSTGMDQTIEIRQLD--GTILQTIQDHDEVVMGADWHPSGEEIV--- 950

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                   +Y   + G           A  +D  +SP G   A    +G    + +  ++G
Sbjct: 951  SATASAHIYRWNTQGKKLTG-WLGHSAPIWDIRYSPDGSQFA---TAGNDSTVKLWSREG 1006

Query: 381  SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                 L  DS +    +S  G  LI      GD  +K++  D      TL+ T       
Sbjct: 1007 KLLHTLNHDSAVWRVAFSADGDYLI---SGSGDKTAKIWRKDG-----TLVTTLTGHQAA 1058

Query: 441  QWV 443
             W 
Sbjct: 1059 VWG 1061



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 59/179 (32%), Gaps = 15/179 (8%)

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                + I +   +++   +  +G+  +       +  IY  + Q                
Sbjct: 924  GTILQTIQDHDEVVMGADWHPSGEEIV---SATASAHIYRWNTQGKKLTGWLGHSAPIWD 980

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              YSPD SQ        G +    + S        + + +++ +   +S  GD +  +  
Sbjct: 981  IRYSPDGSQFA----TAGNDSTVKLWSREGKLLH-TLNHDSAVWRVAFSADGDYLI-SGS 1034

Query: 367  SGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +   I   +KDG+    L    + +    +SP G     +     D   KL+ +D  
Sbjct: 1035 GDKTAKIW--RKDGTLVTTLTGHQAAVWGVAFSPDG---ALAATASIDETVKLWRMDGT 1088



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 91/248 (36%), Gaps = 19/248 (7%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T  K  ++       +++V+    + +     DG  I +L       L   +++P   +V
Sbjct: 645 THLKAIWDLAFSPDGQTLVAVGRPSIMEFWQIDGTPIEHLKIKSSGGLSV-KYNPQGNQV 703

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A       +   V L      R  + I   ++ I A  FS +G+R + +  +D+ + ++ 
Sbjct: 704 AV----GGNDGTVTLFHPDEQRQ-QIINAHQAEINALAFSPDGERLV-TGSQDQTIKLWR 757

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D      + LT+     I   ++PD    V  S     ++   + +         +  +
Sbjct: 758 KD--GKLLKTLTHHSAGIIDIDFNPDGQTFVAGS----HDKTLSLWTRHGTLLNTFKGHQ 811

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSL 404
           ++ +   +SP G ++A T          +           V  +  +A    +S  G+ L
Sbjct: 812 SAIWGVAFSPDGKMLASTGADNTVLLWQIHHP----FHQTVHGAGGKALKAIYSHDGQRL 867

Query: 405 IFSRKKDG 412
           + +  +D 
Sbjct: 868 VTTGDQDN 875



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 58/154 (37%), Gaps = 13/154 (8%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                 +++ R+SP+  +  +AT  ++  ++++  + ++        N  S +    FS++
Sbjct: 973  GHSAPIWDIRYSPDGSQ--FATAGNDSTVKLWSREGKLLHT----LNHDSAVWRVAFSAD 1026

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            G    IS   D+   I+  D        LT         ++SPD + +   +  +   +L
Sbjct: 1027 GDYL-ISGSGDKTAKIWRKD--GTLVTTLTGHQAAVWGVAFSPDGA-LAATASIDETVKL 1082

Query: 329  YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            + M               +      + P G ++A
Sbjct: 1083 WRMD---GTLLATLNGHTSGVRSLAFRPDGQVLA 1113


>gi|158318503|ref|YP_001511011.1| WD-40 repeat-containing serine/threonin protein kinase [Frankia sp.
           EAN1pec]
 gi|158113908|gb|ABW16105.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EAN1pec]
          Length = 737

 Score = 65.8 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 86/250 (34%), Gaps = 19/250 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+   +A A  D    L               +    S + A  FS
Sbjct: 474 LTGHSGWVHSVAFSPDGHTLASAGDDHTVRLWNVTDPANAHPLGAPLTGHTSTVWAVAFS 533

Query: 267 SNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +G R L S   DE + ++ V    Q+   + ++ T  +  S ++SPD   +    D +G
Sbjct: 534 PDG-RILASAGNDETVTLWDVADPAQARPLDVISETRAV-RSVAFSPDGRILASAGD-DG 590

Query: 325 KEQLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              L+ + ++ ++ + +         + +   +SP G  +A            V     +
Sbjct: 591 TASLWNV-ADPTNPRPLGTPLAGHTNTVWVVAFSPNGHTLASAGDDHTVRLWNVTDPANA 649

Query: 382 ---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI----DLNGRNETLINTP 434
                 L    S +++  +S   R+L        D   +L+ +    + + R  +L    
Sbjct: 650 HPLGAPLTGHTSTVRSVAFSSDSRTLASGSD---DHTVRLWDVIDPANAHPRGASLTGHS 706

Query: 435 AYASDPQWVG 444
           ++     +  
Sbjct: 707 SWVRSVAFAP 716



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 69/198 (34%), Gaps = 14/198 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER----LTN 299
           T        +    S + A  FS +G R L S   DE + ++ V             LT 
Sbjct: 419 TNSRTLGAPLAGHTSTVRAVAFSPDG-RILASASDDEPVRLWDV-TDPGDARPLDASLTG 476

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVM--QSNGSDQKRISQDKEASYFDPVWSPQ 357
                 S ++SPD   +    D +   +L+ +   +N            ++ +   +SP 
Sbjct: 477 HSGWVHSVAFSPDGHTLASAGD-DHTVRLWNVTDPANAHPLGAPLTGHTSTVWAVAFSPD 535

Query: 358 GDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           G ++A            V          ++ E   +++  +SP GR L        D  +
Sbjct: 536 GRILASAGNDETVTLWDVADPAQARPLDVISETRAVRSVAFSPDGRILA---SAGDDGTA 592

Query: 417 KLYSIDLNGRNETLINTP 434
            L+++  +  N   + TP
Sbjct: 593 SLWNV-ADPTNPRPLGTP 609



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 71/225 (31%), Gaps = 16/225 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A A+ D+   L               +      + +  FS +G     +  
Sbjct: 439 AFSPDGRILASASDDEPVRLWDVTDPGDARPLDASLTGHSGWVHSVAFSPDGHTLASAGD 498

Query: 278 KDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ--S 333
                     D  +       LT       + ++SPD   +       G ++   +   +
Sbjct: 499 DHTVRLWNVTDPANAHPLGAPLTGHTSTVWAVAFSPDGRILA----SAGNDETVTLWDVA 554

Query: 334 NGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVED 389
           + +  + +    E  +     +SP G ++A     G      V            L    
Sbjct: 555 DPAQARPLDVISETRAVRSVAFSPDGRILASAGDDGTASLWNVADPTNPRPLGTPLAGHT 614

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           + +    +SP+G +L        D   +L+++  +  N   +  P
Sbjct: 615 NTVWVVAFSPNGHTLA---SAGDDHTVRLWNV-TDPANAHPLGAP 655



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 54/322 (16%), Positives = 113/322 (35%), Gaps = 44/322 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR++    D   V  RLWDV            + P   R +     D    S+TG  G  
Sbjct: 444 GRILASASDDEPV--RLWDV------------TDPGDARPL-----DA---SLTGHSGWV 481

Query: 174 NSRILFVS-ESVVSGIIKNSLCVMDR-DGANIRYL---TPSRDQILFEPRFSPNQQKVAY 228
           +S        ++ S    +++ + +  D AN   L          ++   FSP+ + +A 
Sbjct: 482 HSVAFSPDGHTLASAGDDHTVRLWNVTDPANAHPLGAPLTGHTSTVWAVAFSPDGRILA- 540

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            +  +++ + ++ +       P  + +    + +  FS +G R L S   D    +++V 
Sbjct: 541 -SAGNDETVTLWDVADPAQARPLDVISETRAVRSVAFSPDG-RILASAGDDGTASLWNV- 597

Query: 289 LQSNATERLTNTLFINISASY----SPDSSQIVFESDREGKEQLYVM--QSNGSDQKRIS 342
                   L   L  + +  +    SP+   +    D +   +L+ +   +N        
Sbjct: 598 ADPTNPRPLGTPLAGHTNTVWVVAFSPNGHTLASAGD-DHTVRLWNVTDPANAHPLGAPL 656

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSP 399
               ++     +S     +A            V+    +  R   L    S +++  ++P
Sbjct: 657 TGHTSTVRSVAFSSDSRTLASGSDDHTVRLWDVIDPANAHPRGASLTGHSSWVRSVAFAP 716

Query: 400 SGRSLIFSRKKDGDTGSKLYSI 421
            GR+L        D   +L+ +
Sbjct: 717 DGRTLASGSD---DHTMRLWDV 735


>gi|95930804|ref|ZP_01313536.1| WD-40 repeat [Desulfuromonas acetoxidans DSM 684]
 gi|95133152|gb|EAT14819.1| WD-40 repeat [Desulfuromonas acetoxidans DSM 684]
          Length = 1041

 Score = 65.8 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 77/221 (34%), Gaps = 20/221 (9%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N + +    D ++    +SP+            +  +  +  T+         + + ++ 
Sbjct: 355 NQKLMQFPHDGVVNCVAYSPDGT----LAVSGGEDGQAKVWSTQTGEQRDCFSHDKGVV- 409

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              FS +G+          A+ ++S+   +       ++     + ++SPD   ++  S 
Sbjct: 410 DVAFSPDGQTLATVA--GGAIRLWSITDGTPVPF---DSAGYFTTVNFSPDGHLLLSRS- 463

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               ++  V   +  +        +       +SP    +    F     A+  M+ DGS
Sbjct: 464 ---LDEAVVWSLDSGEV-LYHLAHDNFVQQCRFSPDSRWVVTASFDQTA-ALWSME-DGS 517

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           + ++    + +    +SP    ++       D  + ++S+D
Sbjct: 518 RRQVFHHQAPVNCADFSPDSTRVVTGAH---DLTAVIWSVD 555



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 18/181 (9%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
              ++    +S +G    +S  +D    ++S   Q+       +     +  ++SPD   
Sbjct: 363 HDGVVNCVAYSPDGT-LAVSGGEDGQAKVWS--TQTGEQRDCFSHDKGVVDVAFSPDGQT 419

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +   +   G  +L+ +    +D   +  D    +    +SP G L+             V
Sbjct: 420 LATVA--GGAIRLWSI----TDGTPVPFDSAGYFTTVNFSPDGHLLLSRSLDEAV----V 469

Query: 376 MKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              D  +    L  D+ +Q   +SP  R ++ +     D  + L+S++ +G    + +  
Sbjct: 470 WSLDSGEVLYHLAHDNFVQQCRFSPDSRWVVTAS---FDQTAALWSME-DGSRRQVFHHQ 525

Query: 435 A 435
           A
Sbjct: 526 A 526



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 97/287 (33%), Gaps = 26/287 (9%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV---VSGIIKNSLCVMDRD 199
                    R +A + SDD    ++        ++L +S+     V     + L  +  D
Sbjct: 693 NQVVVSDDGRWLA-SASDDNTVRLSSLVTQGKQQVLPLSDRGELIVFSPDSSRLLTVAND 751

Query: 200 GANIRYLTPS--------RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           G+   +   S         + ++    FS + + VA+ T    +   V +  T      +
Sbjct: 752 GSVCLWSVESSEIEHCFDNELMVKSATFSSDGRMVAFVT----NEPSVEIFATDSGERRQ 807

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            I     +  A RFS +  R  ++   D ++     ++++             ++A    
Sbjct: 808 TISYECRINSA-RFSQDSNRLFVACS-DGSLVCC--NVETGQPFWRWQGPSSVVNAVVVD 863

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              QIV  +  +G  QL ++      ++ + Q   A     V     + +  T    +  
Sbjct: 864 SGQQIV-AACEQG--QLAMIALQDGHEQSVWQQGHAIRQMVVC--DNEKLMATVDDEDDI 918

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +  +       +     +++ A ++SP G  L  S      T  +L
Sbjct: 919 VVWSLD-QHRAMQTFAGQNSVDALSFSPDGSLLAVSTGWQSLTVYQL 964



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 80/247 (32%), Gaps = 33/247 (13%)

Query: 202 NIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRV-------YLMDTRIDRAPKRI 253
           N   +T   ++ LF   +S    Q++ +   D     +V       Y+         K +
Sbjct: 578 NQTVVTTGNEEGLFF--WSSQTGQEMFHTGIDMGFARQVALGRQGRYVAIRAAGSEVKLL 635

Query: 254 G---------NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                          I    F+ +    L +  +D    ++S  L+S   +         
Sbjct: 636 SMAQALTMTLTHGGDIRDLAFAPDETSLL-TASEDGTAALWS--LKSREHQFFWRHQAPV 692

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
                S D   +   SD      + +       ++++    +      V+SP    +   
Sbjct: 693 NQVVVSDDGRWLASASD---DNTVRLSSLVTQGKQQVLPLSDRGEL-IVFSPDSSRLLTV 748

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              G    + +   + S+     ++  + ++ T+S  GR + F      +   ++++ D 
Sbjct: 749 ANDGS---VCLWSVESSEIEHCFDNELMVKSATFSSDGRMVAFVTN---EPSVEIFATDS 802

Query: 424 NGRNETL 430
             R +T+
Sbjct: 803 GERRQTI 809


>gi|291441199|ref|ZP_06580589.1| WD40 domain-containing protein beta Propeller [Streptomyces
           ghanaensis ATCC 14672]
 gi|291344094|gb|EFE71050.1| WD40 domain-containing protein beta Propeller [Streptomyces
           ghanaensis ATCC 14672]
          Length = 438

 Score = 65.8 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/282 (15%), Positives = 87/282 (30%), Gaps = 49/282 (17%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            +      P  S +  +VA+ T D        +   R +     +    S   AP  S N
Sbjct: 130 DKGAPYTAPSLSADGTRVAFPTLDGTRAHVYDVRTGRTEPVSDGVHARFSNANAPLISGN 189

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---------ISASYSPDSSQIVFE 319
           G+    + +  E     S+ ++     R T     +            S S D   + + 
Sbjct: 190 GRYVTFTARPTEDAAERSL-IRLRDLRRGTGEWLDDPLAGEEQRVARPSLSHDGRHVAYL 248

Query: 320 SDREGKE-------QLYVMQSNGSDQKRISQD-----KEASYFDPVWSPQGDLIAFT--- 364
           +   G +        +Y +     ++ R+  +      E    DPV SP G  + F    
Sbjct: 249 ASDPGADAPEDREAHVYALDRRTDERVRVDPECVDDPAERGVDDPVMSPDGRHVVFRLTC 308

Query: 365 -----KFSGEKFAIGVMKKDGSQERLL--------VEDSNLQAPTWSPSGRSLIFSRKKD 411
                + + +   + +        R +             L     S  GR + F   ++
Sbjct: 309 RTLRPRGTNDTGDVFLKDLRSGTLRHILGPKPQFATHTGRL-----SADGRHIAFVAAEE 363

Query: 412 GDTGS---KLYSIDL-NGRNETLINTPAYASD--PQWVGFMD 447
            +       +Y +DL  GR + +   P   ++  P     +D
Sbjct: 364 REPRGPLQVIYLLDLRTGRTDMVTARPDGTANQRPASGPTLD 405



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 73/209 (34%), Gaps = 34/209 (16%)

Query: 264 RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATER---LTNTL---FINISASY 309
             S++G+      +         D+  D+Y  DL++        LT+ +       + S 
Sbjct: 81  AISADGRYVAFWSRASNLAPGDTDDVHDVYVKDLRTGRVHWASDLTDGMDKGAPYTAPSL 140

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD---KEASYFDPVWSPQGDLIAFTKF 366
           S D +++ F +    +  +Y         + +S     + ++   P+ S  G  + FT  
Sbjct: 141 SADGTRVAFPTLDGTRAHVY--DVRTGRTEPVSDGVHARFSNANAPLISGNGRYVTFTAR 198

Query: 367 ----SGEKFAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDG----- 412
               + E+  I +          L +    +      P+ S  GR + +     G     
Sbjct: 199 PTEDAAERSLIRLRDLRRGTGEWLDDPLAGEEQRVARPSLSHDGRHVAYLASDPGADAPE 258

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           D  + +Y++D    +E +   P    DP 
Sbjct: 259 DREAHVYALDRR-TDERVRVDPECVDDPA 286



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 29/169 (17%)

Query: 307 ASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQ-----DKEASYFDPV 353
           A+ S D   + F S        D +    +YV           S      DK A Y  P 
Sbjct: 80  AAISADGRYVAFWSRASNLAPGDTDDVHDVYVKDLRTGRVHWASDLTDGMDKGAPYTAPS 139

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRK- 409
            S  G  +AF    G +  +  ++   ++     +    SN  AP  S +GR + F+ + 
Sbjct: 140 LSADGTRVAFPTLDGTRAHVYDVRTGRTEPVSDGVHARFSNANAPLISGNGRYVTFTARP 199

Query: 410 ------------KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                       +D   G+  +  D     E  +  P+ + D + V ++
Sbjct: 200 TEDAAERSLIRLRDLRRGTGEWLDDPLAGEEQRVARPSLSHDGRHVAYL 248


>gi|124006999|ref|ZP_01691828.1| hypothetical protein M23134_08446 [Microscilla marina ATCC 23134]
 gi|123987452|gb|EAY27172.1| hypothetical protein M23134_08446 [Microscilla marina ATCC 23134]
          Length = 1071

 Score = 65.8 bits (159), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 70/194 (36%), Gaps = 27/194 (13%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-- 279
           +++++A       +         R  R  +R+  F + I +   S +GK  ++S  +   
Sbjct: 351 DERRLAIVYAHKGETKLTVYDVLRKKRTFERVWFFFNHITSFDISRDGKHLVMSADRKND 410

Query: 280 -----EAMDIYSVDLQSNATERLTNTLFINISASYSPDS-SQIVFESDREGKEQLYVMQS 333
                   D+Y+ DL ++  ++LT+  + +++ ++  +S  +I+F S+R       V   
Sbjct: 411 VKIKAGQNDLYTFDLDNSILKKLTDDWYDDMNPTFVGNSNKKILFSSNRPSDSLKRVTAQ 470

Query: 334 NGSDQKRISQDKEASYFDPVWS----------PQG---------DLIAFTKFSGEKFAIG 374
              +    +++ +   +DP  S          P           + + +       + + 
Sbjct: 471 QTGNFDMNTENFDIFIYDPTVSKQALQRVTYTPDKEVEPTLLNRNTLLYLNDETGIYQLY 530

Query: 375 VMKKDGSQERLLVE 388
                  +   L  
Sbjct: 531 KHNLRTGKVTQLTN 544



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 59/174 (33%), Gaps = 24/174 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY--------SPDSSQIV 317
           S +GK    S  ++    +   DL +   + +    +  I   +          D  ++ 
Sbjct: 297 SPDGKFIAYSENRNGKFCVIVKDLTTKKRKIIYKGGYHAIYQRFDNNIPLIGWQDERRLA 356

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLIAF-------TKF 366
                +G+ +L V       +   + ++   +F+       S  G  +          K 
Sbjct: 357 IVYAHKGETKLTVYDVLRKKR---TFERVWFFFNHITSFDISRDGKHLVMSADRKNDVKI 413

Query: 367 SGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSG-RSLIFSRKKDGDTGSKL 418
              +  +     D S  + L +D  +   PT+  +  + ++FS  +  D+  ++
Sbjct: 414 KAGQNDLYTFDLDNSILKKLTDDWYDDMNPTFVGNSNKKILFSSNRPSDSLKRV 467



 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 11/92 (11%)

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--------N 391
           R    K+  Y     SP G  IA+++    KF + V      + +++ +          +
Sbjct: 282 RRRNPKKYLYNHVKISPDGKFIAYSENRNGKFCVIVKDLTTKKRKIIYKGGYHAIYQRFD 341

Query: 392 LQAP--TWSPSGRSLIFSRKKDGDTGSKLYSI 421
              P   W    R L       G+T   +Y +
Sbjct: 342 NNIPLIGW-QDERRLAIVYAHKGETKLTVYDV 372


>gi|168702967|ref|ZP_02735244.1| serine/threonine protein kinase [Gemmata obscuriglobus UQM 2246]
          Length = 1087

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 85/265 (32%), Gaps = 54/265 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---- 273
            FSP+ +              V L +    +  + +   +  + A  FS +GK       
Sbjct: 524 AFSPDGKWFV----SGGGDSAVRLWNVATGKLERMLEEHKGRVFAAAFSPDGKWLATAGD 579

Query: 274 ---ISVQKDEAMDIYSVDLQSNAT------ERLTNTLFINISASYSPDSSQIVFESDREG 324
               + +   A+ +++VD +S           L+         ++ PD  ++   S  +G
Sbjct: 580 APLTAGEPSPAVIVWTVDDRSPQPPEVKLHRVLSRLPQRLTHLAFRPDGKRLAVTSFFDG 639

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + +YV  + G   +  +      Y    WS  G  +A     G          + S + 
Sbjct: 640 CD-VYVPDAGG---RVATLRGLKRYEAVAWSADGSRLAVADDEGTLVHEAAPGTEDSFKV 695

Query: 385 L--LVEDSNLQAPTWSPSGRSLI----FSRKKDGD--------------------TGSKL 418
           L  L          ++P G  L+    F     G                     TGS L
Sbjct: 696 LHALPAPGKGLL-AFAPDGHGLLTAGGFYFNNSGQRFTRWNLATGKPVATHPVRVTGSNL 754

Query: 419 -YSIDLNGRNETLINTPAYASDPQW 442
            + +  +GR   ++     A+ P+W
Sbjct: 755 FFEVSADGRTVFVV-----AAHPRW 774



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 75/248 (30%), Gaps = 47/248 (18%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A A       L  +++    +  P R+         P  S++G+R  +         +  
Sbjct: 437 ALAAAGSGTGLPPWVVIALSNPLPFRVPETPEAASWPVRSADGERLAVLC----GERVLI 492

Query: 287 VDLQSNATER-LT---NTLFI------NISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +D +S  T + LT                 A++SPD    V      G   + +      
Sbjct: 493 LDARSGVTVQTLTGNVREPGPREPVHRGTRAAFSPDGKWFV---SGGGDSAVRLWNVATG 549

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIA--------------------FTKFSGEKFAIGVM 376
             +R+ ++ +   F   +SP G  +A                        S +   + + 
Sbjct: 550 KLERMLEEHKGRVFAAAFSPDGKWLATAGDAPLTAGEPSPAVIVWTVDDRSPQPPEVKLH 609

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           +      + L          + P G+ L  +   DG     +Y  D  GR  TL     Y
Sbjct: 610 RVLSRLPQRLTHL------AFRPDGKRLAVTSFFDG---CDVYVPDAGGRVATLRGLKRY 660

Query: 437 ASDPQWVG 444
            +   W  
Sbjct: 661 EAV-AWSA 667



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 79/241 (32%), Gaps = 29/241 (12%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------YATYDDEDILR 238
           VSG   +++ + +     +  +       +F   FSP+ + +A          +    + 
Sbjct: 533 VSGGGDSAVRLWNVATGKLERMLEEHKGRVFAAAFSPDGKWLATAGDAPLTAGEPSPAVI 592

Query: 239 VYLMDTRIDRAP-----KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN- 292
           V+ +D R  + P     + +      +    F  +GKR  ++   D   D+Y  D     
Sbjct: 593 VWTVDDRSPQPPEVKLHRVLSRLPQRLTHLAFRPDGKRLAVTSFFDG-CDVYVPDAGGRV 651

Query: 293 -ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                L     +    ++S D S++   +D EG              K +          
Sbjct: 652 ATLRGLKRYEAV----AWSADGSRLA-VADDEGTLVHEAAPGTEDSFKVLHALPAPGKGL 706

Query: 352 PVWSPQGDLIA-----FTKFSGEKF---AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             ++P G  +      +   SG++F    +   K   +    +   +       S  GR+
Sbjct: 707 LAFAPDGHGLLTAGGFYFNNSGQRFTRWNLATGKPVATHPVRVTGSNLFFEV--SADGRT 764

Query: 404 L 404
           +
Sbjct: 765 V 765



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 63/208 (30%), Gaps = 20/208 (9%)

Query: 218 RFSPNQQKVA----YATYDDEDILRVYLMDTR--IDRAPKRIGNFRSMILAPRFSSNGKR 271
            F+P+   +     +   +       + + T   +   P R+       L    S++G+ 
Sbjct: 708 AFAPDGHGLLTAGGFYFNNSGQRFTRWNLATGKPVATHPVRVT---GSNLFFEVSADGRT 764

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQ 327
             +         +   D  S            + +A    + SPD+  +   +  +G  +
Sbjct: 765 VFVVAAHPRWDRVRVFDAPSGTEV---YPPGDDDTAVAAVALSPDARAVA-TAGADGTLR 820

Query: 328 LY---VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           ++    + + GS   R    +        +SP G L+A         A+           
Sbjct: 821 VWDFERLAAGGSAGPRFLGKRALPARALAFSPDGKLLATFGPRDGTVALWDAATGRHLRE 880

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           L     +     + PSG  L     + G
Sbjct: 881 LPGNSGDGAGLAFDPSGAVLAVGGSEAG 908



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 65/203 (32%), Gaps = 11/203 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + V +         RV + D          G+  + + A   S +  RA+ +   D
Sbjct: 759 SADGRTV-FVVAAHPRWDRVRVFDAPSGTEVYPPGDDDTAVAAVALSPD-ARAVATAGAD 816

Query: 280 EAMDIY---SVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNG 335
             + ++    +    +A  R      +   A ++SPD   +     R+G   L+   +  
Sbjct: 817 GTLRVWDFERLAAGGSAGPRFLGKRALPARALAFSPDGKLLATFGPRDGTVALW--DAAT 874

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
               R             + P G ++A          +   +       L      +Q  
Sbjct: 875 GRHLRELPGNSGDGAGLAFDPSGAVLAVGGSEAGAVNLYDPRTGARAGELRFGLGRIQEL 934

Query: 396 TWSPSGRSLIFSRKKDGDTGSKL 418
            +S +GR+L     +DG     +
Sbjct: 935 AFSGAGRALA---ARDGQVVQVI 954


>gi|254525060|ref|ZP_05137115.1| Dipeptidyl peptidase IV N-terminal region domain protein
           [Stenotrophomonas sp. SKA14]
 gi|219722651|gb|EED41176.1| Dipeptidyl peptidase IV N-terminal region domain protein
           [Stenotrophomonas sp. SKA14]
          Length = 741

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/321 (14%), Positives = 98/321 (30%), Gaps = 92/321 (28%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--- 263
            P     L +P+ +P+  +V++    D D  ++ L    I     R+    S ++ P   
Sbjct: 32  LPLSGPTLMKPKVAPDGSQVSFLRGKDSDRNQLDLWTYDIGSGQTRLL-VDSKVVLPGTE 90

Query: 264 ------------------------RFSSNGKRALISVQKDEAMDIYSVDLQSNA---TER 296
                                   ++S + +R L  +      ++Y  DL+        +
Sbjct: 91  TLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPL----GGELYLYDLKQQGQAAVRQ 146

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--- 353
           LT+       A  SP    + F   R     L+V+      Q ++++D      + V   
Sbjct: 147 LTHGEGFATDAKLSPKGGFVSFIRGR----NLWVIDLASGKQLQLTRDGSTIIGNGVAEF 202

Query: 354 -------------WSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVED----- 389
                        W+P    IAF +         +++ +   + D  ++R          
Sbjct: 203 VADEEMDRHTGYWWAPDDSAIAFARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVR 262

Query: 390 --------SNLQAPTWS---------------PSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                   +    P W                   + L F R+        L  + L+  
Sbjct: 263 VQLGVIAPAADAQPRWVDLGKEQDIYLARVDWRDAQHLSFQRQSRDQKQLDLVEVALDSN 322

Query: 427 NETLINTPAYASDPQWVGFMD 447
            + ++   A+ + P WV   +
Sbjct: 323 RQRVL---AHETSPTWVPLHN 340



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 54/366 (14%), Positives = 112/366 (30%), Gaps = 99/366 (27%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E  L+D+K + Q                         + +T  +G      L      VS
Sbjct: 130 ELYLYDLKQQGQ----------------------AAVRQLTHGEGFATDAKLSPKGGFVS 167

Query: 187 GIIKNSLCVMD----------RDGANI------RYLTPSRDQILFEPRFSPNQQKVAYAT 230
            I   +L V+D          RDG+ I       ++            ++P+   +A+A 
Sbjct: 168 FIRGRNLWVIDLASGKQLQLTRDGSTIIGNGVAEFVADEEMDRHTGYWWAPDDSAIAFAR 227

Query: 231 YDDEDIL----------------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR--A 272
            D+  +                 + Y      +   +      +    PR+   GK    
Sbjct: 228 IDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVRVQLGVIAPAADAQPRWVDLGKEQDI 287

Query: 273 LISVQKDEAMDIYSVDLQSNATERLT-----------NTLFINISASYSP---------D 312
            ++          S   QS   ++L              L    S ++ P         D
Sbjct: 288 YLARVDWRDAQHLSFQRQSRDQKQLDLVEVALDSNRQRVLAHETSPTWVPLHNSLRFLED 347

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF- 371
            S +++ S+R G + LY + S G      +     ++      P  +L+A  + +G+ + 
Sbjct: 348 GS-VLWSSERTGFQHLYRIDSKGKA----TALTRGNW------PVDELLAVDEKAGKVYF 396

Query: 372 ----------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                      I  +   G + + L +   + + +++ +  S+      +  T  ++   
Sbjct: 397 RAGIETSRESQIYAVSLQGGEPQRLSKAPGMHSASFARN-ASVYVDSWSNSSTPPQIELF 455

Query: 422 DLNGRN 427
             NG  
Sbjct: 456 RANGEK 461



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 45/322 (13%), Positives = 99/322 (30%), Gaps = 116/322 (36%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ Q++ +        L +Y +  +   A +++ +        + S  G         
Sbjct: 116 WSPDAQRLLFP---LGGELYLYDLKQQGQAAVRQLTHGEGFATDAKLSPKGGFVSFI--- 169

Query: 279 DEAMDIYSVDLQSNATERLTNTLFI-----------------NISASYSPDSSQIVFE-- 319
               +++ +DL S    +LT                      +    ++PD S I F   
Sbjct: 170 -RGRNLWVIDLASGKQLQLTRDGSTIIGNGVAEFVADEEMDRHTGYWWAPDDSAIAFARI 228

Query: 320 --------------SDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP-------- 356
                         +DR    EQ Y    + + + ++     A+   P W          
Sbjct: 229 DESPVPVQKRYEVYADRTDVIEQRYPAAGDANVRVQLGVIAPAADAQPRWVDLGKEQDIY 288

Query: 357 -------QGDLIAFTKFSGEKFAIGVMK--KDGSQERLLVEDSNLQAPTWSP-------- 399
                      ++F + S ++  + +++   D +++R+L  ++   +PTW P        
Sbjct: 289 LARVDWRDAQHLSFQRQSRDQKQLDLVEVALDSNRQRVLAHET---SPTWVPLHNSLRFL 345

Query: 400 -SGRSLIFSRKKDG--------------------------------------------DT 414
             G S+++S ++ G                                              
Sbjct: 346 EDG-SVLWSSERTGFQHLYRIDSKGKATALTRGNWPVDELLAVDEKAGKVYFRAGIETSR 404

Query: 415 GSKLYSIDL-NGRNETLINTPA 435
            S++Y++ L  G  + L   P 
Sbjct: 405 ESQIYAVSLQGGEPQRLSKAPG 426


>gi|254411414|ref|ZP_05025191.1| hypothetical protein MC7420_1905 [Microcoleus chthonoplastes PCC
           7420]
 gi|196181915|gb|EDX76902.1| hypothetical protein MC7420_1905 [Microcoleus chthonoplastes PCC
           7420]
          Length = 533

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 54/290 (18%), Positives = 102/290 (35%), Gaps = 35/290 (12%)

Query: 135 DRKQIIGKKFFSSPASWR----KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           D + +       +   W      + HT SD        ++G     +    + + SG   
Sbjct: 261 DGQILASGSLDKTVKLWHLETGDLIHTFSD-------HQQGVLCLSLSPDGKWLASGGFD 313

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            ++ V   +   + +     +  +      P+ Q +   ++D      + L      +  
Sbjct: 314 QTIKVWKLETGELCHTLTGHNGSVRSLVIMPDNQTLISGSFDQ----TIKLWHLDQGKFV 369

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISA 307
           + +      + A   S +GK    S   D  +D++ V   DL  +    LT+ L    S 
Sbjct: 370 QDLVQDAGRLSAIALSPDGKTLA-SGGGDGIIDLWHVQPFDLDFS----LTDNLSSINSL 424

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + SPD  ++   +  +G   L V Q + +++    Q   A     ++S  G   A    +
Sbjct: 425 ALSPDGHRLA-AACTDGT--LKVWQLDSAERVESWQCPCAPAMSIIFSDNGQS-AIAAHA 480

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRKKDGD 413
                I  +  D   E LLV D+N      +   SP G+ L     +DG 
Sbjct: 481 DGTIKIWWLGID---EPLLVLDNNDAGSVVSVALSPDGQWLA-GGNRDGT 526


>gi|118431873|ref|NP_148612.2| acylamino-acid-releasing enzyme [Aeropyrum pernix K1]
 gi|116063195|dbj|BAA81456.2| acylamino-acid-releasing enzyme [Aeropyrum pernix K1]
          Length = 595

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 81/220 (36%), Gaps = 9/220 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            +P+         D ++   +Y+    +        +    ++ P +S +G+    +  K
Sbjct: 64  IAPDGLVAFSTDKDGDERWSIYIAGEDLGVRLVAGEDGSINMIGP-WSPDGRLLAFTSNK 122

Query: 279 DEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                 D+Y  D +  +   +     I  ++S+   S  +  + +      +  +     
Sbjct: 123 RNGVDFDLYVFDREKGSVSIVVEGEGIIAASSWIDGSRLLAVKRNSNLDSDILAVNVYKG 182

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLV-EDSNLQA 394
           + K +++ +            G    F      +F  I ++       RL+  E  +++A
Sbjct: 183 EAKVLTRHRGEELNTSPRPIGGGKALFISNMDSEFTGIALIDLQTGDRRLVFREQWDVEA 242

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              S  G+++++S   DG+  S++Y+  ++ R   L   P
Sbjct: 243 LEVS--GKTVVYSLNVDGE--SRVYTTKIDERGSLLQPRP 278



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 76/229 (33%), Gaps = 24/229 (10%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVY----LMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             PR  P+   + Y +        ++      +       +R+G+          + +G 
Sbjct: 17  HTPRIDPSTGCIYYLSDSASSQPVIWKSCESRNDVWLPWERRVGSLE-------IAPDG- 68

Query: 271 RALISVQKDEAMDIYSVDLQSNAT-ERLTNTL--FINISASYSPDSSQIVFESD-REGKE 326
               S  KD   + +S+ +       RL       IN+   +SPD   + F S+ R G +
Sbjct: 69  LVAFSTDKDG-DERWSIYIAGEDLGVRLVAGEDGSINMIGPWSPDGRLLAFTSNKRNGVD 127

Query: 327 -QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             LYV          I  + E       W     L+A  + S     I  +     + ++
Sbjct: 128 FDLYVFDREKGSVS-IVVEGEGIIAASSWIDGSRLLAVKRNSNLDSDILAVNVYKGEAKV 186

Query: 386 LVEDSNLQAPTWSP---SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           L      +  T SP    G   +F    D +    +  IDL   +  L+
Sbjct: 187 LTRHRGEELNT-SPRPIGGGKALFISNMDSEFTG-IALIDLQTGDRRLV 233



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 71/205 (34%), Gaps = 8/205 (3%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           L    +   G  + S+ +   D              +  P +SP+ + +A+ +     + 
Sbjct: 69  LVAFSTDKDGDERWSIYIAGEDLGVRLVAGEDGSINMIGP-WSPDGRLLAFTSNKRNGVD 127

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATER 296
               +  R   +   +     +I A  +  +G R   +    +   DI +V++     + 
Sbjct: 128 FDLYVFDREKGSVSIVVEGEGIIAASSW-IDGSRLLAVKRNSNLDSDILAVNVYKGEAKV 186

Query: 297 LTNTLFINISASYSP-DSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           LT      ++ S  P    + +F S+ + +   + ++     D +R+   ++        
Sbjct: 187 LTRHRGEELNTSPRPIGGGKALFISNMDSEFTGIALIDLQTGD-RRLVFREQWDVEALEV 245

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKD 379
           S  G  + ++     +  +   K D
Sbjct: 246 S--GKTVVYSLNVDGESRVYTTKID 268



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 9/142 (6%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
               P +  I + SD    + +        +   +  ++         +P G L+AF+  
Sbjct: 19  PRIDPSTGCIYYLSDSASSQPVIWKSCESRNDVWLPWERR--VGSLEIAPDG-LVAFSTD 75

Query: 367 SGE--KFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                +++I +  +D     +  ED   N+  P WSP GR L F+  K       LY  D
Sbjct: 76  KDGDERWSIYIAGEDLGVRLVAGEDGSINMIGP-WSPDGRLLAFTSNKRNGVDFDLYVFD 134

Query: 423 LN-GRNETLINTPAYASDPQWV 443
              G    ++      +   W+
Sbjct: 135 REKGSVSIVVEGEGIIAASSWI 156


>gi|189192008|ref|XP_001932343.1| WD repeat containing protein 5 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187973949|gb|EDU41448.1| WD repeat containing protein 5 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 318

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 74/210 (35%), Gaps = 18/210 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                +     + +   +FSP+ + +A A+ D      + + D         +    + I
Sbjct: 47  YAPTLILRGHKKAVSCIKFSPDGRYIASASAD----CTIKIWDAITGALEHTLEGHLAGI 102

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISASYSPDSSQIVF 318
               +S +  + L S   D+++ ++  D  +                S ++SP  + +V 
Sbjct: 103 STISWSPD-SKILASGSDDKSIRLW--DPHTGLAHPTPFIGHHNYVYSIAFSPKGNMLVS 159

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E +Y+     +   R             +   G LI      G    I V   
Sbjct: 160 GSY---DEAVYLWDVRAARVMRSLPAHSDPVGGVDFVRDGTLIVSCSHDG---LIRVWDT 213

Query: 379 DGSQ-ERLLV--EDSNLQAPTWSPSGRSLI 405
              Q  R LV  +++++ +  +SP+G+ ++
Sbjct: 214 ATGQCLRTLVHEDNASVSSVVFSPNGKYVL 243



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 57/178 (32%), Gaps = 11/178 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D     + +        +    +SP+ + +A  + D      + L D  
Sbjct: 74  SASADCTIKIWDAITGALEHTLEGHLAGISTISWSPDSKILASGSDDK----SIRLWDPH 129

Query: 246 ID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                P       + + +  FS  G   + S   DEA+ ++ V         L       
Sbjct: 130 TGLAHPTPFIGHHNYVYSIAFSPKGNMLV-SGSYDEAVYLWDVRAA-RVMRSLPAHSDPV 187

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLI 361
               +  D + IV  S       + V  +      R +  +  AS    V+SP G  +
Sbjct: 188 GGVDFVRDGTLIVSCSH---DGLIRVWDTATGQCLRTLVHEDNASVSSVVFSPNGKYV 242


>gi|332708395|ref|ZP_08428372.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332352798|gb|EGJ32361.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 245

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 65/193 (33%), Gaps = 16/193 (8%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +  + I   RS + +   S + K   IS  KD+ +  +  +L+    +R         + 
Sbjct: 54  QLTQVISGHRSDVNSLAISPDSKTL-ISSSKDKTIKFW--NLRDGRLQR--TIKGFTRTP 108

Query: 308 S---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S    S D  ++   ++R    Q+ +         R  +           SP G ++   
Sbjct: 109 SALVISADGKRLAAATER----QINIWNLETGAPPRTLKGHTGIVRSIAISPDGKILVSG 164

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                     V    G     + E S+   A   SP G+ L+ S     D   K++ +  
Sbjct: 165 SPDKTVMVWDV--LTGQSLGTITEHSDWVTAVAISPDGKHLV-SASGGSDRSIKIWDLSS 221

Query: 424 NGRNETLINTPAY 436
               +T+   P +
Sbjct: 222 LELRQTISKQPRF 234



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/120 (13%), Positives = 37/120 (30%), Gaps = 5/120 (4%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           ++      ++   +  + + + +             I+     SP+ + +   + D    
Sbjct: 112 VISADGKRLAAATERQINIWNLETGAPPRTLKGHTGIVRSIAISPDGKILVSGSPDK--- 168

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             V + D    ++   I      + A   S +GK  + S        I   DL S    +
Sbjct: 169 -TVMVWDVLTGQSLGTITEHSDWVTAVAISPDGKHLV-SASGGSDRSIKIWDLSSLELRQ 226


>gi|328950574|ref|YP_004367909.1| PKD domain containing protein [Marinithermus hydrothermalis DSM
           14884]
 gi|328450898|gb|AEB11799.1| PKD domain containing protein [Marinithermus hydrothermalis DSM
           14884]
          Length = 494

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 87/242 (35%), Gaps = 28/242 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +++  P+   I   P  +P+   +         +       T   R   R      +
Sbjct: 146 GGVLKWRFPTAGPIRSSPALAPDGSILV------GSMDNHLYALTPEGRMRWRFATRSDI 199

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + AP  + +G+  +     D +  +Y+++       +L     I+ S + +P+ +  V+ 
Sbjct: 200 VAAPAIAPDGR--IYVGSWDGS--VYALEPDGTLKWKLATRFRIDSSPALAPNGT--VYI 253

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             R G   LY +  +G  Q    Q        P  +P G              +  ++ D
Sbjct: 254 GSRGG--HLYAITPDGKLQWHF-QTGSPIISSPALAPDGT----VYVGSMDHHVYALEPD 306

Query: 380 GSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG--RNETLINTPAY 436
           G+    +    ++  +P     G   I+    DG     +Y+++ +G  +   L + P +
Sbjct: 307 GTLRWQVRLGGSVPSSPAIGVDGT--IYVGAMDGG----VYALEPDGTLKWRVLTDGPVW 360

Query: 437 AS 438
           AS
Sbjct: 361 AS 362


>gi|325970853|ref|YP_004247044.1| hypothetical protein SpiBuddy_1025 [Spirochaeta sp. Buddy]
 gi|324026091|gb|ADY12850.1| hypothetical protein SpiBuddy_1025 [Spirochaeta sp. Buddy]
          Length = 884

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 91/216 (42%), Gaps = 12/216 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP++ +  Y   +D    +  L++  +D          S + +  ++     + +S+   
Sbjct: 302 SPDEGRAVYRYTEDGSTEK--LLELSLDGGSALSFAQDSAVFSSLWADATHPSSLSLASV 359

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              D+Y +DL S    RLT+   + +  + S D S+IV  S       L  +  +  +  
Sbjct: 360 SYSDLYLLDLASLKARRLTHEQRL-VQPAISRDGSRIVASSVNGSFYDLVELDDDTLEIT 418

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTW 397
            ++  +  S+  P  +  G  + +        ++ +++ +G +  LLV  +  +  +P +
Sbjct: 419 TLASQERVSFLQPALNHDGSAVVYVAMEQGNSSLYLLE-EGKKPLLLVGPTADELRSPRF 477

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           + +  S++F ++       +LY   L+     L++T
Sbjct: 478 TDNDSSVLFIKE------LQLYQYRLDTGEIHLVHT 507



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 66/190 (34%), Gaps = 10/190 (5%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D A+++    + +Q L +P  S +  ++  A+  +     +  +D             R 
Sbjct: 368 DLASLKARRLTHEQRLVQPAISRDGSRIV-ASSVNGSFYDLVELDDDTLEITTLASQERV 426

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIV 317
             L P  + +G   +    +     +Y ++ +      L         S  ++ + S ++
Sbjct: 427 SFLQPALNHDGSAVVYVAMEQGNSSLYLLE-EGKKPLLLVGPTADELRSPRFTDNDSSVL 485

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F  +     QLY  + +  +   +  D    Y   +    G  + +  ++ + FA+  ++
Sbjct: 486 FIKE----LQLYQYRLDTGEIHLVHTDPVGIYNASLV---GHELFYETYTAQGFAVKKVE 538

Query: 378 KDGSQERLLV 387
                   + 
Sbjct: 539 LKNPSIEQVT 548


>gi|119491229|ref|ZP_01623326.1| hypothetical protein L8106_25475 [Lyngbya sp. PCC 8106]
 gi|119453570|gb|EAW34731.1| hypothetical protein L8106_25475 [Lyngbya sp. PCC 8106]
          Length = 628

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 89/274 (32%), Gaps = 31/274 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIG--------KKFFSSPASWRKIAHTISDDIYQ- 164
           GR++  G +   +  +LWD+K  + I          +    SP   R +A    D+  + 
Sbjct: 357 GRILASGSNDSTI--KLWDMKTHQIIATLKGHSHCVRSVAFSPDG-RILASGSVDNTIKL 413

Query: 165 -------SITGEKGDFNSRILFVSESVV----SGIIKNSLCVMDRDGANIRYLTPSRDQI 213
                  +I   KG  NS +            SG    ++ + D                
Sbjct: 414 WDVETRATIATLKGHSNSVVCVALNQKANILASGSADKTIKLWDVSTHREIATLEGHSGC 473

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +    FSP+   +A  +YD      + L D    R    +    S IL+  FS + +   
Sbjct: 474 INSVAFSPDSSILASCSYDK----SIKLWDVATHREIATLEGHSSYILSVVFSPDSRTLA 529

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            S   D+ + +++V  Q               S + S D S +   S       + +   
Sbjct: 530 -SGSFDQTIKLWNVKTQGEFATLRGRNSSSIWSIALSKDGSTLASGSK---DSTIKLWNV 585

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
              ++    +          +SP G+ +A   + 
Sbjct: 586 KIPNKITTLKGHSHWVRSVAFSPDGNTLASGSYD 619



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 78/238 (32%), Gaps = 16/238 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    FSP+ + +A  + D      + L D +  +    +      + +  F
Sbjct: 340 TLTGHSNHVRSVAFSPDGRILASGSNDS----TIKLWDMKTHQIIATLKGHSHCVRSVAF 395

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G R L S   D  + ++  D+++ AT  +      + S      + +    +     
Sbjct: 396 SPDG-RILASGSVDNTIKLW--DVETRAT--IATLKGHSNSVVCVALNQKANILASGSAD 450

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + +   +   +    +          +SP   ++A   +  +   +  +        L
Sbjct: 451 KTIKLWDVSTHREIATLEGHSGCINSVAFSPDSSILASCSYD-KSIKLWDVATHREIATL 509

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
               S + +  +SP  R+L        D   KL+++   G   TL       S   W 
Sbjct: 510 EGHSSYILSVVFSPDSRTLA---SGSFDQTIKLWNVKTQGEFATLR---GRNSSSIWS 561



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 56/182 (30%), Gaps = 9/182 (4%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K +    + + +  FS +G R L S   D  + ++ +         L        S +
Sbjct: 337 CIKTLTGHSNHVRSVAFSPDG-RILASGSNDSTIKLWDMKTHQIIAT-LKGHSHCVRSVA 394

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +   S       + +            +    S      + + +++A +  + 
Sbjct: 395 FSPDGRILASGSV---DNTIKLWDVETRATIATLKGHSNSVVCVALNQKANILA-SGSAD 450

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +   +  +        L      + +  +SP    L        D   KL+ +  +    
Sbjct: 451 KTIKLWDVSTHREIATLEGHSGCINSVAFSPDSSILASCSY---DKSIKLWDVATHREIA 507

Query: 429 TL 430
           TL
Sbjct: 508 TL 509


>gi|89096489|ref|ZP_01169381.1| acylamino-acid-releasing enzyme [Bacillus sp. NRRL B-14911]
 gi|89088504|gb|EAR67613.1| acylamino-acid-releasing enzyme [Bacillus sp. NRRL B-14911]
          Length = 594

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 68/183 (37%), Gaps = 17/183 (9%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--VFESD 321
             S +  + + S   +   +++++DL +     L+          Y  +   +  V +SD
Sbjct: 22  AVSPDESQLVFSTNLNGKYNLWAMDLPNQFPYPLSFQNQSCQEIEYDKEGRFLLAVIDSD 81

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKD 379
            +   Q+Y +  NG + K I   + A +   + S  G  + +T                +
Sbjct: 82  GDENGQVYALPRNGGELKPIRTQENARHMGLIASKDGKTLYYTSSKEDATFLKAYAYNME 141

Query: 380 GSQERLLVEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNETLINT 433
             +E++L+      A T+    SP  +  +F     G   +  YS+    +G  E L+  
Sbjct: 142 TGEEKVLLHGRG--AATFLTAKSPDEKRFVF-----GRMFANTYSLAYAWDGEKEVLLTP 194

Query: 434 PAY 436
            A 
Sbjct: 195 EAE 197



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 1/88 (1%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
             SP    + F+     K+ +  M         L  ++ + Q   +   GR L+     D
Sbjct: 22  AVSPDESQLVFSTNLNGKYNLWAMDLPNQFPYPLSFQNQSCQEIEYDKEGRFLLAVIDSD 81

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASD 439
           GD   ++Y++  NG     I T   A  
Sbjct: 82  GDENGQVYALPRNGGELKPIRTQENARH 109


>gi|261408843|ref|YP_003245084.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Paenibacillus sp. Y412MC10]
 gi|261285306|gb|ACX67277.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Paenibacillus sp. Y412MC10]
          Length = 598

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 62/158 (39%), Gaps = 10/158 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFINISASYSPDSSQI--VFESD 321
           S++  R + S   +   ++++++L+   +    LT    I       P+   I   F+ D
Sbjct: 24  SADESRLVFSSSLNGKFNLWAMELEGETSYPYPLTYNDQIASFIKLDPEGRHILTAFDRD 83

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFSGEKFAI--GVMK 377
                Q + ++ NG +   + +  +A   ++    S  G  + +    G    +   V  
Sbjct: 84  GNENYQFHALRWNGGEPMPLFEGADAEDKHYFVHLSEDGKRLYYVTSKGNPSFLNSRVYH 143

Query: 378 KDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGD 413
            D  ++ LL E   ++ +    SP  +++ +++     
Sbjct: 144 LDTKEDHLLHEGEATSTEMCAVSPDEKTIAYTKMYANT 181



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 64/209 (30%), Gaps = 16/209 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S ++ ++ +++  +       +        P  +     +    +    G+  L +  +
Sbjct: 23  ISADESRLVFSSSLNGKFNLWAMELEGETSYPYPLTYNDQIASFIKLDPEGRHILTAFDR 82

Query: 279 DE--AMDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFESDREGKEQL---YV 330
           D       +++         L           +   S D  ++ + +  +G        V
Sbjct: 83  DGNENYQFHALRWNGGEPMPLFEGADAEDKHYFVHLSEDGKRLYYVTS-KGNPSFLNSRV 141

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
              +  +   + + +  S      SP    IA+TK     + +  +K++G +   L    
Sbjct: 142 YHLDTKEDHLLHEGEATSTEMCAVSPDEKTIAYTKMYANTYYVSYVKREGEEPLCLTPTP 201

Query: 391 NLQAPTWSPS-----GRSLIFSRKKDGDT 414
             +    S          +IF+   + + 
Sbjct: 202 --EQVHISGDVLFVSNDQVIFATDYESEF 228



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/289 (15%), Positives = 84/289 (29%), Gaps = 43/289 (14%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           SR++F S    S   K +L  M+ +G     Y     DQI    +  P  + +  A   D
Sbjct: 28  SRLVFSS----SLNGKFNLWAMELEGETSYPYPLTYNDQIASFIKLDPEGRHILTAFDRD 83

Query: 234 EDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVD 288
            +    +         P  +    +          S +GKR      K     +      
Sbjct: 84  GNENYQFHALRWNGGEPMPLFEGADAEDKHYFVHLSEDGKRLYYVTSKGNPSFLNSRVYH 143

Query: 289 LQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           L +     L      +    + SPD   I +         +  ++  G +   ++   E 
Sbjct: 144 LDTKEDHLLHEGEATSTEMCAVSPDEKTIAYTKMYANTYYVSYVKREGEEPLCLTPTPE- 202

Query: 348 SYFDPVWSPQ-----GDLIAFTKFSGEKFAIG------------VMKKDGSQERLLVEDS 390
                  S        D + F      +F+              + + D    +LL    
Sbjct: 203 ---QVHISGDVLFVSNDQVIFATDYESEFSYVARYDIPQRKFEPLCRIDRESIQLL---- 255

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                 +    R+L    +K      +LY+  L+    T I  P+   +
Sbjct: 256 -----RFHKDSRTLYIVTEKG--VEDRLYAYSLDSGELTPIPLPSNIVE 297



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 3/89 (3%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS---PSGRSLIFSRKK 410
            S     + F+     KF +  M+ +G          N Q  ++    P GR ++ +  +
Sbjct: 23  ISADESRLVFSSSLNGKFNLWAMELEGETSYPYPLTYNDQIASFIKLDPEGRHILTAFDR 82

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASD 439
           DG+   + +++  NG     +   A A D
Sbjct: 83  DGNENYQFHALRWNGGEPMPLFEGADAED 111


>gi|312211912|emb|CBX91996.1| hypothetical protein [Leptosphaeria maculans]
          Length = 1044

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 75/202 (37%), Gaps = 34/202 (16%)

Query: 258 SMILAPRFSSNGKRALISV----------QKDEAMDIYSVDLQSNA-TERLTNTLFINIS 306
               +  FS+NG+  L             + D    +   D+++     RL+      + 
Sbjct: 237 GSFGSTSFSANGRLLLYHAANSSTQMGMREADRLPHVVVYDMEAKQELHRLSGHRDAIMW 296

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +++SPD  +I   S  +G  ++Y       D    +++     +   +SP    IA++  
Sbjct: 297 SAFSPDDEKIATVS-WDGTLRMY--SPTTGDLLWATENSGGQSWTGAFSPDSKFIAWSSK 353

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPT-----WSPSGRSL---------IFSRKKDG 412
            G +  +     D S+ R L    +  +       W P+ R +         I++    G
Sbjct: 354 FGREIQV----LDSSEGRQLSTFPDKLSEWCRCLIWHPNNRDIALCAGKEAYIWTAFDGG 409

Query: 413 DTGS--KLYSIDLNGRNETLIN 432
             GS  + Y +D + +  T+ N
Sbjct: 410 PNGSIPQHYMMDNDNKWPTMAN 431



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 77/197 (39%), Gaps = 25/197 (12%)

Query: 218 RFSPNQQKVAYA---------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            FS N + + Y            + + +  V + D    +   R+   R  I+   FS +
Sbjct: 243 SFSANGRLLLYHAANSSTQMGMREADRLPHVVVYDMEAKQELHRLSGHRDAIMWSAFSPD 302

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQ 327
            ++   +V  D  + +YS    +      T N+   + + ++SPDS  I + S    + Q
Sbjct: 303 DEKIA-TVSWDGTLRMYS--PTTGDLLWATENSGGQSWTGAFSPDSKFIAWSSKFGREIQ 359

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPV---WSPQGDLIAFTKFSGEKFAIGVM---KKDGS 381
           +     + S+ +++S   +          W P    IA    +G++  I        +GS
Sbjct: 360 V----LDSSEGRQLSTFPDKLSEWCRCLIWHPNNRDIALC--AGKEAYIWTAFDGGPNGS 413

Query: 382 QERLLVEDSNLQAPTWS 398
             +  + D++ + PT +
Sbjct: 414 IPQHYMMDNDNKWPTMA 430



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 62/189 (32%), Gaps = 28/189 (14%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +  L+  RD I     FSP+ +K+A  ++D    LR+Y              N     
Sbjct: 282 QELHRLSGHRDAI-MWSAFSPDDEKIATVSWD--GTLRMY--SPTTGDLLWATENSGGQS 336

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQI 316
               FS + K    S +    + +    L S+   +L+              + P++  I
Sbjct: 337 WTGAFSPDSKFIAWSSKFGREIQV----LDSSEGRQLSTFPDKLSEWCRCLIWHPNNRDI 392

Query: 317 VFESDREGKEQLYVMQSNGSDQKRI----------SQDKEASYFDPVWSPQGDLIA--FT 364
              +   GKE       +G     I               A+     W  QG L+A  F+
Sbjct: 393 ALCA---GKEAYIWTAFDGGPNGSIPQHYMMDNDNKWPTMANIQRVDWMDQGKLLALEFS 449

Query: 365 KFSGEKFAI 373
           + +   + I
Sbjct: 450 EGTNLVYNI 458


>gi|325270360|ref|ZP_08136965.1| prolyl oligopeptidase [Prevotella multiformis DSM 16608]
 gi|324987304|gb|EGC19282.1| prolyl oligopeptidase [Prevotella multiformis DSM 16608]
          Length = 718

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 80/242 (33%), Gaps = 64/242 (26%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I A + S +G+R +  V      +      +  +D        LT +      A++  
Sbjct: 47  GRIGAAQASPDGRRIVYQVGYYSVKENKGHQVLRIMDADGRNDRLLTTSAANESDAAWL- 105

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--------- 362
           D++ + F +      QL+ M+++G+D++++++  +       +SP    +          
Sbjct: 106 DNNTLAFLT----GGQLWTMKADGTDRRQLTR-SDIDIEGFRFSPDRRRVVLIKSIPYYG 160

Query: 363 ---------------------------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                                      +   +   F   V          ++E    ++P
Sbjct: 161 TIRQNPSDLPKATGMVITDMNYRHWDHYVTANAHPFVADVTDGGIGDGVDVLEGEPYESP 220

Query: 396 ----------TWSPSGRSLIFS-RKKDGD-----TGSKLYSIDLNGRNETLINTPAYASD 439
                      WS   +S+ ++ RKK+G      T + +Y  ++  R    +  P    +
Sbjct: 221 LAPFGGIEQIDWSRDSKSVAYTCRKKEGTQYAISTDADIYIYNVETRRTKNLCKPEGYVE 280

Query: 440 PQ 441
           P 
Sbjct: 281 PA 282



 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/374 (13%), Positives = 118/374 (31%), Gaps = 87/374 (23%)

Query: 144 FFSSPASWRKIAHTI-SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           +        ++   + +D     +        S   ++  + ++ +    L  M  DG +
Sbjct: 68  YSVKENKGHQVLRIMDADGRNDRLLTTSAANESDAAWLDNNTLAFLTGGQLWTMKADGTD 127

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVA------------------------------YATYD 232
            R LT S   I    RFSP++++V                               Y  +D
Sbjct: 128 RRQLTRSDIDIEGF-RFSPDRRRVVLIKSIPYYGTIRQNPSDLPKATGMVITDMNYRHWD 186

Query: 233 DE-----DILRVYLMDTRIDRAPKRI-GNFRSMILAP-------RFSSNGKRALISVQKD 279
                        + D  I      + G      LAP        +S + K    + +K 
Sbjct: 187 HYVTANAHPFVADVTDGGIGDGVDVLEGEPYESPLAPFGGIEQIDWSRDSKSVAYTCRKK 246

Query: 280 EAM--------DIYSVDLQSNATERL-------------TNTL--------------FIN 304
           E          DIY  ++++  T+ L             T ++                +
Sbjct: 247 EGTQYAISTDADIYIYNVETRRTKNLCKPEGYVEPAIDATKSMRNQAVNHQAGDMNVGYD 306

Query: 305 ISASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           ++  +SPD   I ++S         + +L V +     +  +++  +++  +  W     
Sbjct: 307 VNPKFSPDGRYIAWQSMKNNGYESDRNRLCVYELATGRKTYVTESFDSNVDEYTWGADSK 366

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           ++ F         I      G + + L E  +    + +  G   + + ++     +++Y
Sbjct: 367 VLYFIGVWHATENIYQTSLKG-EVKQLTE-GDHNYVSIALLGDRKLLAIRQSLSQANEIY 424

Query: 420 SIDLNGRNETLINT 433
           ++    + +T + T
Sbjct: 425 AVTPAKKEKTSLQT 438



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 74/232 (31%), Gaps = 23/232 (9%)

Query: 212 QILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                P+FSP+ + +A+ +  +     D  R+ + +    R      +F S +    + +
Sbjct: 304 GYDVNPKFSPDGRYIAWQSMKNNGYESDRNRLCVYELATGRKTYVTESFDSNVDEYTWGA 363

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           + K            +IY   L+    ++LT      +S +   D   +          +
Sbjct: 364 DSKVLYFIGVWHATENIYQTSLK-GEVKQLTEGDHNYVSIALLGDRKLLAIRQSLSQANE 422

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y +     ++  +             S +   I      GE     V   DG + +  V
Sbjct: 423 IYAVTPAKKEKTSLQT---------QLSFENKHIYDQLALGEVHDRWVKTTDGKEMQEWV 473

Query: 388 EDSNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                  P + P+ +   L+F         S+ +S      N  ++    Y 
Sbjct: 474 VTP----PHFDPNRKYPTLLFCEGGPQSPVSQFWSYRW---NLQIMAANGYV 518


>gi|108759328|ref|YP_632613.1| hypothetical protein MXAN_4442 [Myxococcus xanthus DK 1622]
 gi|108463208|gb|ABF88393.1| hypothetical protein MXAN_4442 [Myxococcus xanthus DK 1622]
          Length = 598

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 66/225 (29%), Gaps = 19/225 (8%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----VQKDEA 281
           + +          +Y  D  +D AP+ +               G+               
Sbjct: 137 IVFTRVSTSSA--IYTFDVAVDAAPRELAPEAGSSRRSAV-IGGRTVAWQDFGYTGVTSQ 193

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD---Q 338
            +I   DL      RLT+  F + + + SPD S +V+    E   +  + Q+        
Sbjct: 194 PEIAVYDLDQGTLTRLTDDTFQDRAPAVSPDGSTVVWAKCDEQGLRCDIWQARRGAYGFS 253

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSG----EKFAIGVMKKDGSQERLLVEDSNLQA 394
            +     E     P     GD+  +             I     +G  E+ L        
Sbjct: 254 SQALTGSEGEESQPDT--NGDIAVYASTRTLDGVTDRDIYWKPLNGGTEQRLALPGMDAN 311

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYAS 438
           P+ S  G  + F R+        +   DL+      +  TP   S
Sbjct: 312 PSIS--GSLIAFERRDPVRNDFDIVLYDLSTETLYAITETPENES 354



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 66/393 (16%), Positives = 110/393 (27%), Gaps = 63/393 (16%)

Query: 1   MSLRFFIA-EELNMKINLCLLLVLIGGFFPTS------IHAFVKVATNSANYSPVSIAFT 53
           M L F        M   L L   L       S      +   + V               
Sbjct: 33  MGLHFGTPGRSYPMLRTLALSCCLFSPLVFASTPELRTLTGTLHVVAGGPGDQTDPHVSG 92

Query: 54  KFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVT 113
             V+        SE+   DL+ S        D+        D +    D        +V 
Sbjct: 93  PLVAYTNESRGTSEIRYHDLRTS-------ADAAIPNGGAFDFVSDISDGT------IVF 139

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            RV              +DV               A+ R++A           +      
Sbjct: 140 TRVSTSSA------IYTFDVA------------VDAAPRELAPEA------GSSRRSAVI 175

Query: 174 NSRILFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
             R +   +   +G+     + V D D   +  LT    Q    P  SP+   V +A  D
Sbjct: 176 GGRTVAWQDFGYTGVTSQPEIAVYDLDQGTLTRLTDDTFQ-DRAPAVSPDGSTVVWAKCD 234

Query: 233 DEDILRVYLMDTRIDR--APKRIGNFRSMILAPRFSSNGKRALISVQK--DE--AMDIYS 286
           ++ +        R     + + +         P   +NG  A+ +  +  D     DIY 
Sbjct: 235 EQGLRCDIWQARRGAYGFSSQALTGSEGEESQPD--TNGDIAVYASTRTLDGVTDRDIYW 292

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQ 343
             L     +RL     ++ + S S   S I FE  R+       + +   +      I++
Sbjct: 293 KPLNGGTEQRL-ALPGMDANPSIS--GSLIAFER-RDPVRNDFDIVLYDLSTETLYAITE 348

Query: 344 DKEA-SYFDPVWSPQGD-LIAFTKFSGEKFAIG 374
             E  S  D      G   + +T      F + 
Sbjct: 349 TPENESLTDLSVDADGTVRVVWTVSENGDFNVH 381



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 72/244 (29%), Gaps = 61/244 (25%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +         P  S  G     + +     +I   DL+++A   + N    +  +  S 
Sbjct: 77  VVAGGPGDQTDPHVS--GPLVAYTNESRGTSEIRYHDLRTSADAAIPNGGAFDFVSDIS- 133

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           D + IVF         +Y          R ++ +  +S    V    G  +A+  F    
Sbjct: 134 DGT-IVFTRVST-SSAIYTFDVAVDAAPRELAPEAGSSRRSAVI--GGRTVAWQDFGYTG 189

Query: 371 F----AIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF------------------- 406
                 I V   D G+  RL  +    +AP  SP G ++++                   
Sbjct: 190 VTSQPEIAVYDLDQGTLTRLTDDTFQDRAPAVSPDGSTVVWAKCDEQGLRCDIWQARRGA 249

Query: 407 -----------------------------SRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                                        +R  DG T   +Y   LNG  E  +  P   
Sbjct: 250 YGFSSQALTGSEGEESQPDTNGDIAVYASTRTLDGVTDRDIYWKPLNGGTEQRLALPGMD 309

Query: 438 SDPQ 441
           ++P 
Sbjct: 310 ANPS 313


>gi|119486061|ref|ZP_01620123.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
 gi|119456836|gb|EAW37964.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
          Length = 1173

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 92/239 (38%), Gaps = 25/239 (10%)

Query: 176  RILFVSESVVSGIIKNSLCVMDRDGANIRYL-------TPSRDQILFEPRFSPNQQKVAY 228
            RI F S    +  +++ L +    G    +         P+    +++  +S + Q +A 
Sbjct: 900  RISFSSTQNYTSGLEDLLTIAKIGGTIEFWRSGQLINSFPAHSSQIWDLSWSYDGQILAS 959

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            ++ D        L +   D     IG  ++ +   + + + +  +I++ +D    ++  D
Sbjct: 960  SSDDK----TAKLWNVDGDLITTLIG-HKARVYRVKIAPDNQT-VITLSEDGTAKLWKTD 1013

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-A 347
                  + L            SPD+  I   S     + + + + +G+  +  +   E  
Sbjct: 1014 --GTLVKTLNGHNNSAWGLDISPDAEIIATASL---DDTVKLWKLDGTILQ--TFKGECR 1066

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLI 405
                  +SP G  +A     G    + V+K DG++   L + +SN+    +SP GR + 
Sbjct: 1067 GISSVNFSPDGQTLAVGCGDGS---VKVLKIDGTEIVKLKIHESNVWDVAFSPDGRFIA 1122



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 66/205 (32%), Gaps = 22/205 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +A  + D      + L +       +        + A  FS + +  +      
Sbjct: 575 SPDGEIIATGSSDR----SIKLWNRHGQLLNRL--EHDGTVFAFSFSPDSQTLV---SAT 625

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               IY  + +     + +         S SPD       S   G   + +    G    
Sbjct: 626 TLGTIYLWNARGKLLRKFSAHQGAIWDISISPDGKTFASAS---GDTTVKLWNLEGKLLN 682

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
             +     S +   + P+G++IA     G    + + + +G   + ++  +  +AP W  
Sbjct: 683 SFT-GNLTSIWGVAFHPEGNMIASASLDGT---VKLWRLNG---QKILTIAAHKAPVW-- 733

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + +  +G     + S   +
Sbjct: 734 -DVKFAWLKDANGQNNPIIVSASGD 757



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 89/248 (35%), Gaps = 30/248 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    S+ + +R G  +  L    D  +F   FSP+ Q +  AT     +  +YL + R
Sbjct: 583 TGSSDRSIKLWNRHGQLLNRL--EHDGTVFAFSFSPDSQTLVSATT----LGTIYLWNAR 636

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  ++    +  I     S +GK    S   D  + ++  +L+       T  L    
Sbjct: 637 -GKLLRKFSAHQGAIWDISISPDGKTFA-SASGDTTVKLW--NLEGKLLNSFTGNLTSIW 692

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW--------SPQ 357
             ++ P+ + I   S  +G  +L+ +      QK ++    A++  PVW           
Sbjct: 693 GVAFHPEGNMIASASL-DGTVKLWRLN----GQKILTI---AAHKAPVWDVKFAWLKDAN 744

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           G        +     I V   DG   + L      +     S  G  +       GD   
Sbjct: 745 GQNNPIIVSASGDNTIKVWTTDGKLIKTLEGHQGEVMEIEISSDGNQIA---SVSGDKTV 801

Query: 417 KLYSIDLN 424
           +L++ + N
Sbjct: 802 RLWTTEGN 809



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 67/223 (30%), Gaps = 61/223 (27%)

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGK--------RALISVQKD---EAMDIYSVDL 289
            +   +  R  + + +  S      +S++GK        R   S  ++      D+ ++  
Sbjct: 862  IWQLKFSRDGETLASANSSNTVKLWSTDGKLQQTIDGRRISFSSTQNYTSGLEDLLTIAK 921

Query: 290  QSNATERLTNTLFINISA---------SYSPDSSQIVFESDR-----------------E 323
                 E   +   IN            S+S D   +   SD                   
Sbjct: 922  IGGTIEFWRSGQLINSFPAHSSQIWDLSWSYDGQILASSSDDKTAKLWNVDGDLITTLIG 981

Query: 324  GKEQLYVMQSNGSDQKRIS--------------------QDKEASYFDPVWSPQGDLIAF 363
             K ++Y ++    +Q  I+                         S +    SP  ++IA 
Sbjct: 982  HKARVYRVKIAPDNQTVITLSEDGTAKLWKTDGTLVKTLNGHNNSAWGLDISPDAEIIAT 1041

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLI 405
                     + + K DG+  +    +   + +  +SP G++L 
Sbjct: 1042 ASLDDT---VKLWKLDGTILQTFKGECRGISSVNFSPDGQTLA 1081


>gi|326779988|ref|ZP_08239253.1| WD40 repeat-containing protein [Streptomyces cf. griseus XylebKG-1]
 gi|326660321|gb|EGE45167.1| WD40 repeat-containing protein [Streptomyces cf. griseus XylebKG-1]
          Length = 1304

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 84/256 (32%), Gaps = 24/256 (9%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID--RAPKRIGNFRSMILAPR 264
                D  +    FSP+   +A A  D    + ++ +        AP   G+    +L+  
Sbjct: 1045 LTGADGRILAVAFSPDGDTLAAAGDDKNGRIALWDVSDPAHPVSAPGVSGSGGRSVLSLA 1104

Query: 265  FSSNGKRALISVQK-DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDR 322
            FS +G          +  + ++S         +++      +   ++SPD   +      
Sbjct: 1105 FSPDGAVLAAGGDGSNGTVGLWSTGQPGARVGKKIDQPTASSTWVAFSPDGRTLA----- 1159

Query: 323  EGKEQLYVMQSNGSDQKRISQD------KEASYFDPVWSPQGDLIAF--TKFSGEKFAIG 374
             G  +  V   + +D   + +          S +   +SP G  +       SG      
Sbjct: 1160 TGNSRGVVTLWDSTDPHHLKRRDKSLTVPGGSLWSVEFSPDGKTLVAGGHSDSGTIHRWN 1219

Query: 375  VMKKDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL- 430
            V   D        L V+   +    +SP  R+L  +     D  + L+ +D+      + 
Sbjct: 1220 VTDPDRPTAIGRPLTVDTGFVAVLAFSPDSRTLAATTD---DGVATLWDLDVESSISRVC 1276

Query: 431  INTPAYASDPQWVGFM 446
              +     + +W  ++
Sbjct: 1277 AASSGALGEDEWKLYV 1292



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 81/227 (35%), Gaps = 10/227 (4%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               R + +    FSP+   +A      +  L      +R  R  + +      ILA  FS
Sbjct: 999  LAGRGKPVNAVAFSPDGGTLAAGDSGGDVTLWNTADPSRPVRLSEPLTGADGRILAVAFS 1058

Query: 267  SNGKRALISV-QKDEAMDIYSV--DLQSNATERLTNTLFINI-SASYSPDSSQIVFESD- 321
             +G     +   K+  + ++ V       +   ++ +   ++ S ++SPD + +    D 
Sbjct: 1059 PDGDTLAAAGDDKNGRIALWDVSDPAHPVSAPGVSGSGGRSVLSLAFSPDGAVLAAGGDG 1118

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV----MK 377
              G   L+     G+   +      AS     +SP G  +A T  S     +        
Sbjct: 1119 SNGTVGLWSTGQPGARVGKKIDQPTASSTWVAFSPDGRTLA-TGNSRGVVTLWDSTDPHH 1177

Query: 378  KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + L V   +L +  +SP G++L+     D  T  +    D +
Sbjct: 1178 LKRRDKSLTVPGGSLWSVEFSPDGKTLVAGGHSDSGTIHRWNVTDPD 1224



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 66/202 (32%), Gaps = 15/202 (7%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ + +A  T D    L       R     K +       L+  FS +G     +  
Sbjct: 834  AFSPDGRTLAAGTQDSSVHLWKGADTDRPTLLGKPLKGPAQPFLSVAFSPDGSTLA-AGS 892

Query: 278  KDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             D ++ +++V      T     LT          +SPDS  +    + +G   L+ +   
Sbjct: 893  ADRSVHLWNVAHPKAITLLGRPLTGPGSQVTDVVFSPDSRTLA-AGNSDGNVDLWSLP-- 949

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSN 391
                 RI      +     +SP G  +A    +           +    R   L      
Sbjct: 950  ---PTRI-PGAGGNVSSVAFSPDGRTLAAANQNATVSLWNTADPNNPVPRGEPLAGRGKP 1005

Query: 392  LQAPTWSPSGRSLIFSRKKDGD 413
            + A  +SP G +L  +    GD
Sbjct: 1006 VNAVAFSPDGGTLA-AGDSGGD 1026



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 66/196 (33%), Gaps = 20/196 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F P    +A A  D+   + ++ +               S + A  FS +G+    +  +
Sbjct: 789 FGPAGHTLAAACDDEAGTIGLWDLTDPARPDRGPTMKAGSDVNALAFSPDGRTLA-AGTQ 847

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQIVFES-DREGKEQLYVMQS 333
           D ++ ++     ++    L   L           +SPD S +   S DR     +++   
Sbjct: 848 DSSVHLWK-GADTDRPTLLGKPLKGPAQPFLSVAFSPDGSTLAAGSADRS----VHLWNV 902

Query: 334 NGSDQ----KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                     R      +   D V+SP    +A    S     +  +       R+    
Sbjct: 903 AHPKAITLLGRPLTGPGSQVTDVVFSPDSRTLA-AGNSDGNVDLWSLPPT----RIPGAG 957

Query: 390 SNLQAPTWSPSGRSLI 405
            N+ +  +SP GR+L 
Sbjct: 958 GNVSSVAFSPDGRTLA 973



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 60/214 (28%), Gaps = 29/214 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVY-----LMDTRIDRAPKRIGNFRS----------MILA 262
            FSP+ + +A   +  +           L   R    P  +G  +S           + +
Sbjct: 679 AFSPDGRVLAVGGHTSDHGDGGSGGFTELWSLRSPSHPVLLGRLKSPGVLGWDAATTVES 738

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQS-----NATERLTNTLFINISASYSPDSSQI- 316
             FS +G+    +      + ++ V              L      +    + P    + 
Sbjct: 739 LTFSPDGRTLA-AGWHAGLVSLWDVTRPEDARPVGKPVNLRCPDVFSRRVVFGPAGHTLA 797

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
               D  G   L+ +       +  +    +      +SP G  +A          +   
Sbjct: 798 AACDDEAGTIGLWDLTDPARPDRGPTMKAGSDVNALAFSPDGRTLA-AGTQDSSVHLWK- 855

Query: 377 KKDGSQERLLVED-----SNLQAPTWSPSGRSLI 405
             D  +  LL +          +  +SP G +L 
Sbjct: 856 GADTDRPTLLGKPLKGPAQPFLSVAFSPDGSTLA 889



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 70/256 (27%), Gaps = 36/256 (14%)

Query: 88   KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD------------ 135
              +           D   L       G  +    D       LWDV D            
Sbjct: 1035 PSRPVRLSEPLTGADGRILAVAFSPDGDTLAAAGDDKNGRIALWDVSDPAHPVSAPGVSG 1094

Query: 136  --RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD-----------FNSRILFVSE 182
               + ++   F    A         +  +    TG+ G             ++ + F  +
Sbjct: 1095 SGGRSVLSLAFSPDGAVLAAGGDGSNGTVGLWSTGQPGARVGKKIDQPTASSTWVAFSPD 1154

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-------FSPNQQKVAYATYDDED 235
                    +   V   D  +  +L   RD+ L  P        FSP+ + +    + D  
Sbjct: 1155 GRTLATGNSRGVVTLWDSTDPHHL-KRRDKSLTVPGGSLWSVEFSPDGKTLVAGGHSDSG 1213

Query: 236  ILRVYLMDT--RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
             +  + +    R     + +      +    FS + +    +   D    ++ +D++S+ 
Sbjct: 1214 TIHRWNVTDPDRPTAIGRPLTVDTGFVAVLAFSPDSRTLA-ATTDDGVATLWDLDVESSI 1272

Query: 294  TERLTNTLFINISASY 309
            +     +        +
Sbjct: 1273 SRVCAASSGALGEDEW 1288


>gi|453195|emb|CAA54566.1| oligogalacturonide lyase [Pectobacterium carotovorum]
          Length = 388

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 66/183 (36%), Gaps = 32/183 (17%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 ++   +  ++ DG N+R +    +        + P+   + Y +Y  +D  R  
Sbjct: 207 HEGPHDLVDARMWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDTNRYI 266

Query: 241 LMDTRIDRAPKRI----------GNFRSMILAPRFSSNGKRALISVQKDEAMDI------ 284
                +    +++           N+   +L      +G    + VQ D    I      
Sbjct: 267 RSIDPVTLEDRQLRVMPPCSHLMSNYDGTLLVG----DGSDVPVDVQDDGGYKIENDPFL 322

Query: 285 YSVDLQSNATERLTNTL-FINI----------SASYSPDSSQIVFESDREGKEQLYVMQS 333
           Y  +L++    R+       ++            S++PD+ Q++F SD +GK  LY+ + 
Sbjct: 323 YVFNLKTGKEHRIAQHNTSWDVLEGDRQVTHPHPSFTPDNKQVLFTSDVDGKPALYLAKV 382

Query: 334 NGS 336
             S
Sbjct: 383 PDS 385



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 64/189 (33%), Gaps = 28/189 (14%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKE 326
           +G + L     D   + Y +DL+  +  +LT     N    + SP+   + +  +     
Sbjct: 46  DGSKLLFGAAFDGPWNYYLLDLKEQSATQLTEGKGDNTFGGFLSPNDDALYYVKN---TR 102

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFA------------ 372
            L  +     ++K I Q  +       W    D   +   +   E +             
Sbjct: 103 NLMRVDLATLEEKTIYQVPDDWVGYGTWVANSDCTKMVSIEIKKEDWKPLTDWKKFQEFY 162

Query: 373 --------IGVMKKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSID 422
                   I V    G  E +L E+  L  P + P    ++ F  +   D   ++++ I+
Sbjct: 163 FTNPCCRLIRVDLITGEAETILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFIN 222

Query: 423 LNGRNETLI 431
            +G N   +
Sbjct: 223 EDGTNMRKV 231



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/225 (8%), Positives = 61/225 (27%), Gaps = 31/225 (13%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MD 283
           +  +   +     +    I    + I      +  P +   +        +         
Sbjct: 158 FQEFYFTNPCCRLIRVDLITGEAETILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDAR 217

Query: 284 IYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQK 339
           ++ ++       ++             + PD S +++ S    +    +  +     + +
Sbjct: 218 MWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDTNRYIRSIDPVTLEDR 277

Query: 340 RISQDKE-----ASYFDPVWSPQGDLIAFTKFSGEKFAI------GVMKKDGSQERLLVE 388
           ++          ++Y   +    G  +         + I       V      +E  + +
Sbjct: 278 QLRVMPPCSHLMSNYDGTLLVGDGSDVPVDVQDDGGYKIENDPFLYVFNLKTGKEHRIAQ 337

Query: 389 DSNLQ------------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +                P+++P  + ++F+   DG     L  +
Sbjct: 338 HNTSWDVLEGDRQVTHPHPSFTPDNKQVLFTSDVDGKPALYLAKV 382



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 76/240 (31%), Gaps = 34/240 (14%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F  +  K+ +     +     YL+D +   A +              S N   
Sbjct: 36  NYFYQKCFFNDGSKLLFGA-AFDGPWNYYLLDLKEQSATQLTEGKGDNTFGGFLSPNDDA 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASY--SPDSSQIV----------- 317
                      ++  VDL +   + +       +   ++  + D +++V           
Sbjct: 95  LYYVKN---TRNLMRVDLATLEEKTIYQVPDDWVGYGTWVANSDCTKMVSIEIKKEDWKP 151

Query: 318 ------FESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
                 F+         +L  +     + + I Q+ +     P++ P   + +AF     
Sbjct: 152 LTDWKKFQEFYFTNPCCRLIRVDLITGEAETILQENQW-LGHPIYRPGDDNTVAFCHEGP 210

Query: 369 EKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DG+  R +    E  +     W P G ++I+      DT   + SID
Sbjct: 211 HDLVDARMWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDTNRYIRSID 270



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 37/115 (32%), Gaps = 5/115 (4%)

Query: 281 AMDIYSVDLQSNATERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               Y          RLT               +  D S+++F +  +G    Y++    
Sbjct: 10  TFHTYQDSATGTEVVRLTPPDVICHRNYFYQKCFFNDGSKLLFGAAFDGPWNYYLLDLKE 69

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
               ++++ K  + F    SP  D + + K +     + +   +      + +D 
Sbjct: 70  QSATQLTEGKGDNTFGGFLSPNDDALYYVKNTRNLMRVDLATLEEKTIYQVPDDW 124


>gi|309790880|ref|ZP_07685423.1| WD-40 repeat-containing protein [Oscillochloris trichoides DG6]
 gi|308227068|gb|EFO80753.1| WD-40 repeat-containing protein [Oscillochloris trichoides DG6]
          Length = 1060

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 70/220 (31%), Gaps = 13/220 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A  + D        L D    +    +    S + A  +S +G+       
Sbjct: 650 AFSPDGSVIASGSADG----SARLWDLNQVQPIHSLA-VESEVWAIAYSPDGRYLA---T 701

Query: 278 KDEAMDIYSVD-LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D A  I   D L       +     +    + SPD S I   S  +   +L+   S+  
Sbjct: 702 GDFAGQIMLWDVLSGEQIWSIPAHQDLITGLAISPDGSSIA-SSSADLSVRLWA--SSDG 758

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               + +    +     +S  GD +A     G    +  +        L+  ++ L   T
Sbjct: 759 TAIDVLRGHATTVESVAFSATGDRLATASADGSA-KVWALDSSRMILSLVGHENGLSGAT 817

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           +SP G  L+ S          L     +G    L +    
Sbjct: 818 FSPDGNQLLTSSLDGTLRTWDLSLAPADGAYGALFSPAGD 857



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 96/257 (37%), Gaps = 37/257 (14%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + + D       +  P+   ++     SP+   +A ++ D    L V L  + 
Sbjct: 701 TGDFAGQIMLWDVLSGEQIWSIPAHQDLITGLAISPDGSSIASSSAD----LSVRLWASS 756

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              A   +    + + +  FS+ G R   +   D +  ++++D        + +   +  
Sbjct: 757 DGTAIDVLRGHATTVESVAFSATGDRLA-TASADGSAKVWALDSSRMILSLVGHENGL-S 814

Query: 306 SASYSPDSSQIVFESDREGKEQLY---VMQSNGSDQKRISQDKE-----ASYFDPVWSPQ 357
            A++SPD +Q++  S  +G  + +   +  ++G+     S   +      +    +W+  
Sbjct: 815 GATFSPDGNQLL-TSSLDGTLRTWDLSLAPADGAYGALFSPAGDTLATYGATQVQIWNQA 873

Query: 358 GD----------LIAFTKFSGEKFAIGVMKKDGS-----------QERLLVEDSNLQAPT 396
           GD          LIA   +  +   I V   DG+            +RL      +    
Sbjct: 874 GDTLLYSTELPMLIATIAYHPQGTEIAVGSIDGTILLIDPQSGTINQRLEGHSDQINRLA 933

Query: 397 WSPSGRSLIFSRKKDGD 413
           +SP G+ L+ S  +DG 
Sbjct: 934 FSPDGQRLV-SASRDGS 949



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 106/308 (34%), Gaps = 45/308 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G  +  G     V   LW++   +  +  +F + P S  ++A   S+DI        G  
Sbjct: 606 GTYLAAGSGDQVV---LWEITRGQ--VAYQFDAHPESGAEVA---SNDILAVAFSPDG-- 655

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     + SG    S  + D +     +      ++ +   +SP+ + +A   +  
Sbjct: 656 --------SVIASGSADGSARLWDLNQVQPIHSLAVESEV-WAIAYSPDGRYLATGDF-- 704

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               ++ L D         I   + +I     S +G     S   D ++ ++       A
Sbjct: 705 --AGQIMLWDVLSGEQIWSIPAHQDLITGLAISPDGSSIA-SSSADLSVRLW-ASSDGTA 760

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            + L        S ++S    ++   +  +G  +++ + S+      +    E       
Sbjct: 761 IDVLRGHATTVESVAFSATGDRLA-TASADGSAKVWALDSSRMILSLV--GHENGLSGAT 817

Query: 354 WSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +SP G+ +  +   G    + + +   DG+   L           +SP+G +L       
Sbjct: 818 FSPDGNQLLTSSLDGTLRTWDLSLAPADGAYGAL-----------FSPAGDTLA----TY 862

Query: 412 GDTGSKLY 419
           G T  +++
Sbjct: 863 GATQVQIW 870



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 63/354 (17%), Positives = 108/354 (30%), Gaps = 65/354 (18%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIG--------KKFFSSPASWRKIAHTISDDIYQS 165
            GR +  G      +  LWDV   +QI               SP     IA + +D   + 
Sbjct: 696  GRYLATGD--FAGQIMLWDVLSGEQIWSIPAHQDLITGLAISPDG-SSIASSSADLSVRL 752

Query: 166  ITGEKGDFNSRI---LFVSESVVSGIIKNSLCVMDRDGANIRYLTPS---------RDQI 213
                 G     +       ESV      + L     DG+   +   S          +  
Sbjct: 753  WASSDGTAIDVLRGHATTVESVAFSATGDRLATASADGSAKVWALDSSRMILSLVGHENG 812

Query: 214  LFEPRFSPNQQKVAYATYD---------------DEDILRVYLMDTRIDRAPKRI----- 253
            L    FSP+  ++  ++ D                   L     DT       ++     
Sbjct: 813  LSGATFSPDGNQLLTSSLDGTLRTWDLSLAPADGAYGALFSPAGDTLATYGATQVQIWNQ 872

Query: 254  --------GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFIN 304
                         +I    +   G    +    D    I  +D QS    +RL       
Sbjct: 873  AGDTLLYSTELPMLIATIAYHPQGTEIAV-GSIDGT--ILLIDPQSGTINQRLEGHSDQI 929

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               ++SPD  ++V  S R+G   ++   ++GS+   +            +SP G +IA  
Sbjct: 930  NRLAFSPDGQRLVSAS-RDGSLSIWDC-TDGSEIINLPTANNDEVTVVAFSPDGSMIASV 987

Query: 365  KFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                    I +    G    +   L  +  +Q  T+S +GR +  +    G +G
Sbjct: 988  ANG----EISLWDAAGQSLGKTWTLRSNEIVQGLTFSHAGRWIA-AGNDGGGSG 1036



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 64/187 (34%), Gaps = 32/187 (17%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLT-NTLFINISA-SYSPDSSQIVFES 320
             S +G+    S        I+ +D  Q    +R+T N   + +   ++SPD + +    
Sbjct: 557 ALSPDGRLVATSANDG---MIHIIDRAQGQEIQRITANADGLPVFGLAFSPDGTYLA--- 610

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              G     V+      Q     D        V S     I    FS +   I     DG
Sbjct: 611 --AGSGDQVVLWEITRGQVAYQFDAHPESGAEVASND---ILAVAFSPDGSVIASGSADG 665

Query: 381 S------QERLLVEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSID-LNGRNET 429
           S       +   +    +++  W    SP GR L       GD   ++   D L+G  E 
Sbjct: 666 SARLWDLNQVQPIHSLAVESEVWAIAYSPDGRYLA-----TGDFAGQIMLWDVLSG--EQ 718

Query: 430 LINTPAY 436
           + + PA+
Sbjct: 719 IWSIPAH 725



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 41/142 (28%), Gaps = 5/142 (3%)

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G I  ++ ++D     I          +    FSP+ Q++  A+    D        T  
Sbjct: 902  GSIDGTILLIDPQSGTINQRLEGHSDQINRLAFSPDGQRLVSAS---RDGSLSIWDCTDG 958

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                         +    FS +G         +  + ++    QS        +  I   
Sbjct: 959  SEIINLPTANNDEVTVVAFSPDGSMIA--SVANGEISLWDAAGQSLGKTWTLRSNEIVQG 1016

Query: 307  ASYSPDSSQIVFESDREGKEQL 328
             ++S     I   +D  G   L
Sbjct: 1017 LTFSHAGRWIAAGNDGGGSGHL 1038



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 5/73 (6%)

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN---L 392
           S  ++I    E    D   SP G L+A +   G    I   +  G + + +  +++   +
Sbjct: 540 SRVRQIIHVSERGLQDLALSPDGRLVATSANDGMIHIID--RAQGQEIQRITANADGLPV 597

Query: 393 QAPTWSPSGRSLI 405
               +SP G  L 
Sbjct: 598 FGLAFSPDGTYLA 610


>gi|256787676|ref|ZP_05526107.1| repetative protein [Streptomyces lividans TK24]
 gi|289771567|ref|ZP_06530945.1| repetitive protein [Streptomyces lividans TK24]
 gi|289701766|gb|EFD69195.1| repetitive protein [Streptomyces lividans TK24]
          Length = 626

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 88/227 (38%), Gaps = 21/227 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+    A A YD     RV L D R   +P+ +G    ++   RFS +G+    S  
Sbjct: 27  AFSPDGTHYASAGYDG----RVVLWD-RSGTSPRWVGRHSRLVNGVRFSPSGRLLA-SGS 80

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+   I+ V   +    +L      +++A    D +++V  S  +G  +++ +++    
Sbjct: 81  ADKTCRIWEV--ATGRQVQLLARQPDDLNALAWLDENRLVTVSQ-DGTGRIWDIRTG--- 134

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              + Q+    + D   S            GE   I +   DGS  R L +  + +   W
Sbjct: 135 ---VLQEGVIFHADHCMSVDAAPTGVLASCGEDATIRLWDTDGSLLRDLPQAGHAEMCRW 191

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTPAYASDPQWV 443
           SP G  L  +   DG     ++ +  +G   T +    A      W 
Sbjct: 192 SPDGTLLA-ASCDDGF----VHIVRTDGELVTKVGPYTAAVKSVAWS 233



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 92/237 (38%), Gaps = 21/237 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S      + + DR G + R++     +++   RFSP+ + +A  + D        + +  
Sbjct: 37  SAGYDGRVVLWDRSGTSPRWVGR-HSRLVNGVRFSPSGRLLASGSADK----TCRIWEVA 91

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R  + +      + A  +    +  L++V +D    I+  D+++   +     +  + 
Sbjct: 92  TGRQVQLLARQPDDLNALAWLDENR--LVTVSQDGTGRIW--DIRTGVLQ---EGVIFHA 144

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               S D++     +       + +  ++GS  + + Q   A      WSP G L+A + 
Sbjct: 145 DHCMSVDAAPTGVLASCGEDATIRLWDTDGSLLRDLPQAGHAEM--CRWSPDGTLLAASC 202

Query: 366 FSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             G    + +++ DG     +    + +++  WS  G  ++       D+   L+ I
Sbjct: 203 DDG---FVHIVRTDGELVTKVGPYTAAVKSVAWSQDGSRIVIGAY---DSTITLWDI 253



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 64/203 (31%), Gaps = 18/203 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--S 275
            +S +  ++    YD      + L D    R   R         A  +S++G+  +    
Sbjct: 231 AWSQDGSRIVIGAYDS----TITLWDIADCRPLVRWYGAHLWPRAVDWSADGRTVVAGTF 286

Query: 276 VQKDEAMDIYSVDLQS--NATERLTNTLFINISA--SYSPDSSQIVFESDREGKEQLYVM 331
             +   +D+  +   +  +    +T    +        S     +    D      + V 
Sbjct: 287 SARPAVIDVPEIPADALPDEVREITLEASVPTHGVNHVSAAGEVLAAGGD---NGTIRVW 343

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQ-GDLIAFTKFSGEKFAIGVMKK-DGSQERLLVED 389
              G+    +     +       S +   L+A+  FSG    +GV     G     +  +
Sbjct: 344 SHRGATATEVPVGNGSLVNTVAVSAELPGLVAYGSFSG---RVGVADAVTGRDVAAVQRE 400

Query: 390 SNLQAPTWSPSGRSLIFSRKKDG 412
             +    WSP GR L  +  + G
Sbjct: 401 HPVNRAAWSPDGRRLAVADYEGG 423



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 53/175 (30%), Gaps = 15/175 (8%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R+  +    +SP+ +++A A  D E  L +Y    R              I    +  + 
Sbjct: 399 REHPVNRAAWSPDGRRLAVA--DYEGGLDLYAWTGRELVPGVHYAGHDGAIKDVSW-VDA 455

Query: 270 KRALISVQKDEAMDIYSVD----LQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            R + +   D    + + +            L N   +   A        ++    R+  
Sbjct: 456 DRLV-TYSTDRRAHLITTEGTLIRSFGGHGELINGGSVTTVA-----GRALLATVSRDRT 509

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            ++Y       +  ++    + S     W P G+ +  T        + V+    
Sbjct: 510 SRIY--DLETGELLQVLVGHDESAKCAAWHPGGEPLLVTGSYDFTGRLWVLDPKT 562



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 84/285 (29%), Gaps = 34/285 (11%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH-----TISDDI 162
                TG +   G+D      RLWD  D   +            R            DD 
Sbjct: 150 VDAAPTGVLASCGED---ATIRLWDT-DGSLLRDLPQAGHAEMCRWSPDGTLLAASCDDG 205

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIK----------NSLCVMDRDGANIRYLTPSRDQ 212
           +  I    G+  +++   + +V S                  +   D A+ R L      
Sbjct: 206 FVHIVRTDGELVTKVGPYTAAVKSVAWSQDGSRIVIGAYDSTITLWDIADCRPLVRWY-G 264

Query: 213 ILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR----- 264
               PR   +S + + V   T+     + + + +   D  P  +         P      
Sbjct: 265 AHLWPRAVDWSADGRTVVAGTFSARPAV-IDVPEIPADALPDEVREITLEASVPTHGVNH 323

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S+ G+    +   +  + ++S    +     + N   +N  A  +     + + S    
Sbjct: 324 VSAAGEVLA-AGGDNGTIRVWSHRGATATEVPVGNGSLVNTVAVSAELPGLVAYGSFSG- 381

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             ++ V  +         Q +E       WSP G  +A   + G 
Sbjct: 382 --RVGVADAVTGRDVAAVQ-REHPVNRAAWSPDGRRLAVADYEGG 423


>gi|21221147|ref|NP_626926.1| repetative protein [Streptomyces coelicolor A3(2)]
 gi|8052401|emb|CAB92258.1| putative repetative protein [Streptomyces coelicolor A3(2)]
          Length = 626

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 88/227 (38%), Gaps = 21/227 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+    A A YD     RV L D R   +P+ +G    ++   RFS +G+    S  
Sbjct: 27  AFSPDGTHYASAGYDG----RVVLWD-RSGTSPRWVGRHSRLVNGVRFSPSGRLLA-SGS 80

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+   I+ V   +    +L      +++A    D +++V  S  +G  +++ +++    
Sbjct: 81  ADKTCRIWEV--ATGRQVQLLARQPDDLNALAWLDENRLVTVSQ-DGTGRIWDIRTG--- 134

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              + Q+    + D   S            GE   I +   DGS  R L +  + +   W
Sbjct: 135 ---VLQEGVIFHADHCMSVDAAPTGVLASCGEDATIRLWDTDGSLLRDLPQAGHAEMCRW 191

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTPAYASDPQWV 443
           SP G  L  +   DG     ++ +  +G   T +    A      W 
Sbjct: 192 SPDGTLLA-ASCDDGF----VHIVRTDGELVTKVGPYTAAVKSVAWS 233



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 92/237 (38%), Gaps = 21/237 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S      + + DR G + R++     +++   RFSP+ + +A  + D        + +  
Sbjct: 37  SAGYDGRVVLWDRSGTSPRWVGR-HSRLVNGVRFSPSGRLLASGSADK----TCRIWEVA 91

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R  + +      + A  +    +  L++V +D    I+  D+++   +     +  + 
Sbjct: 92  TGRQVQLLARQPDDLNALAWLDENR--LVTVSQDGTGRIW--DIRTGVLQ---EGVIFHA 144

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               S D++     +       + +  ++GS  + + Q   A      WSP G L+A + 
Sbjct: 145 DHCMSVDAAPTGVLASCGEDATIRLWDTDGSLLRDLPQAGHAEM--CRWSPDGTLLAASC 202

Query: 366 FSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             G    + +++ DG     +    + +++  WS  G  ++       D+   L+ I
Sbjct: 203 DDG---FVHIVRTDGELVTKVGPYTAAVKSVAWSQDGSRIVIGAY---DSTIALWDI 253



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 64/203 (31%), Gaps = 18/203 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--S 275
            +S +  ++    YD      + L D    R   R         A  +S++G+  +    
Sbjct: 231 AWSQDGSRIVIGAYDS----TIALWDIADCRPLVRWYGAHLWPRAVDWSADGRTVVAGTF 286

Query: 276 VQKDEAMDIYSVDLQS--NATERLTNTLFINISA--SYSPDSSQIVFESDREGKEQLYVM 331
             +   +D+  +   +  +    +T    +        S     +    D      + V 
Sbjct: 287 SARPAVIDVPEIPADALPDEVREITLEASVPTHGVNHVSAAGEVLAAGGD---NGTIRVW 343

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQ-GDLIAFTKFSGEKFAIGVMKK-DGSQERLLVED 389
              G+    +     +       S +   L+A+  FSG    +GV     G     +  +
Sbjct: 344 SHRGATATEVPVGNGSLVNTVAVSAELPGLVAYGSFSG---RVGVADAVTGRDVAAVQRE 400

Query: 390 SNLQAPTWSPSGRSLIFSRKKDG 412
             +    WSP GR L  +  + G
Sbjct: 401 HPVNRAAWSPDGRRLAVADYEGG 423



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 53/175 (30%), Gaps = 15/175 (8%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R+  +    +SP+ +++A A  D E  L +Y    R              I    +  + 
Sbjct: 399 REHPVNRAAWSPDGRRLAVA--DYEGGLDLYAWTGRELVPGVHYAGHDGAIKDVSW-VDA 455

Query: 270 KRALISVQKDEAMDIYSVD----LQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            R + +   D    + + +            L N   +   A        ++    R+  
Sbjct: 456 DRLV-TYSTDRRAHLITTEGTLIRSFGGHGELINGGSVTTVA-----GRALLATVSRDRT 509

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            ++Y       +  ++    + S     W P G+ +  T        + V+    
Sbjct: 510 SRIY--DLETGELLQVLVGHDESAKCAAWHPGGEPLLVTGSYDFTGRLWVLDPKT 562



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 84/285 (29%), Gaps = 34/285 (11%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH-----TISDDI 162
                TG +   G+D      RLWD  D   +            R            DD 
Sbjct: 150 VDAAPTGVLASCGED---ATIRLWDT-DGSLLRDLPQAGHAEMCRWSPDGTLLAASCDDG 205

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIK----------NSLCVMDRDGANIRYLTPSRDQ 212
           +  I    G+  +++   + +V S                  +   D A+ R L      
Sbjct: 206 FVHIVRTDGELVTKVGPYTAAVKSVAWSQDGSRIVIGAYDSTIALWDIADCRPLVRWY-G 264

Query: 213 ILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR----- 264
               PR   +S + + V   T+     + + + +   D  P  +         P      
Sbjct: 265 AHLWPRAVDWSADGRTVVAGTFSARPAV-IDVPEIPADALPDEVREITLEASVPTHGVNH 323

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S+ G+    +   +  + ++S    +     + N   +N  A  +     + + S    
Sbjct: 324 VSAAGEVLA-AGGDNGTIRVWSHRGATATEVPVGNGSLVNTVAVSAELPGLVAYGSFSG- 381

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             ++ V  +         Q +E       WSP G  +A   + G 
Sbjct: 382 --RVGVADAVTGRDVAAVQ-REHPVNRAAWSPDGRRLAVADYEGG 423


>gi|273068521|gb|ACZ97557.1| Tup11 protein [Schizosaccharomyces octosporus]
          Length = 601

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 98/306 (32%), Gaps = 48/306 (15%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           ++DV   +++       SP   R        D+Y        D           +V+G  
Sbjct: 325 IFDVHTGQKLFTLN-EDSPDQSR--------DLYVRTIAFSPDGK--------YLVTGTE 367

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              + + D     +R+L    +Q ++   FS N + +   + D        L D    + 
Sbjct: 368 DRQIKLWDLATQKVRFLFSGHEQDIYSLDFSHNGRFIVSGSGDH----TARLWDVETGQC 423

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             ++    + + A   S N +   +    D+ + ++SV       ERL        S ++
Sbjct: 424 ILKL-EIENGVTAIAISPNDQYIAV-GSLDQIIRVWSV--SGTLVERLEGHKESVYSIAF 479

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------------QDKEASYFDPVWSPQ 357
           SPDS  +V  S     + + V +        +S                        SP 
Sbjct: 480 SPDSKILVSGSL---DKTIKVWELQFPQSVGLSAIKPDGVCKATYHGHSDFVLSVAVSPD 536

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTG 415
               A +                 Q  L  +       + ++SP G+   F+    GD  
Sbjct: 537 NRW-ALSGSKDRSIQFW--DLQTGQSYLTCQGHKNSVISVSFSPDGKQ--FASG-SGDLR 590

Query: 416 SKLYSI 421
           ++++SI
Sbjct: 591 ARIWSI 596



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 77/217 (35%), Gaps = 41/217 (18%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR I  G        RLWDV+  + I+                    +I   +T      
Sbjct: 401 GRFIVSGSGDHTA--RLWDVETGQCILKL------------------EIENGVTAIAISP 440

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--- 230
           N + + V      G +   + V    G  +  L   ++ + +   FSP+ + +   +   
Sbjct: 441 NDQYIAV------GSLDQIIRVWSVSGTLVERLEGHKESV-YSIAFSPDSKILVSGSLDK 493

Query: 231 ----YDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAMDIY 285
               ++ +    V L   + D   K   +  S  +L+   S +  R  +S  KD ++  +
Sbjct: 494 TIKVWELQFPQSVGLSAIKPDGVCKATYHGHSDFVLSVAVSPD-NRWALSGSKDRSIQFW 552

Query: 286 SVDLQSNATERLTN--TLFINISASYSPDSSQIVFES 320
             DLQ+     LT        IS S+SPD  Q    S
Sbjct: 553 --DLQTGQ-SYLTCQGHKNSVISVSFSPDGKQFASGS 586


>gi|126459387|ref|YP_001055665.1| peptidase S9 prolyl oligopeptidase [Pyrobaculum calidifontis JCM
           11548]
 gi|126249108|gb|ABO08199.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Pyrobaculum calidifontis JCM 11548]
          Length = 571

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 8/133 (6%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL-IAF 363
            S  + P   ++ + SD  G+ QL+V   N S    +    +    D   +P G L +A 
Sbjct: 15  TSPRFGPRG-EVYYLSDVTGQMQLWV---NKSGVHDVVLPWDGRVGDYRVAPDGALALAA 70

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +   EK+ I +    G+    +  +       +SP GR L F+  +D      LY  D 
Sbjct: 71  DQNGDEKWRIYI--AVGNDVVPVSTEGVNSLGAFSPDGRRLAFTSTRDDPQNFHLYIYDR 128

Query: 424 -NGRNETLINTPA 435
            +G  +  +    
Sbjct: 129 ESGETKLALQLAG 141



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 89/266 (33%), Gaps = 57/266 (21%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PRF P  +   Y   D    +++++  + +      +  +   +   R + +G    +++
Sbjct: 17  PRFGPRGE--VYYLSDVTGQMQLWVNKSGVHD---VVLPWDGRVGDYRVAPDG---ALAL 68

Query: 277 QKDEAMDI-YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQS 333
             D+  D  + + +         +T  +N   ++SPD  ++ F S R+      LY+   
Sbjct: 69  AADQNGDEKWRIYIAVGNDVVPVSTEGVNSLGAFSPDGRRLAFTSTRDDPQNFHLYIYDR 128

Query: 334 NGSDQKR-------------------ISQDKEASYFDPVW-------------------S 355
              + K                    I+  +       +W                   S
Sbjct: 129 ESGETKLALQLAGINVVEEWNEAGIFITHYETNFDSTILWYKDGEVRELTKHEGEALNYS 188

Query: 356 PQ--GDLIAFTKFSGEKFA-IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD 411
           P+  G+ + F      ++  +  M     + + +V+ D +++   +   G  + F+  + 
Sbjct: 189 PRLVGERLYFLTNMAWEYVGVAAMNLSTGEWKYVVQLDRDVEH--FDVDGGYMAFTLNEG 246

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYA 437
           G +G  LY + L          P   
Sbjct: 247 GASG--LYFMHLPSALTHRAAIPTGV 270



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 60/174 (34%), Gaps = 13/174 (7%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           S + +     FSP+ +++A+ +  D+       +  R     K       + +   ++  
Sbjct: 92  STEGVNSLGAFSPDGRRLAFTSTRDDPQNFHLYIYDRESGETKLALQLAGINVVEEWNEA 151

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--INISASYSPDSSQIVFESDREGKE 326
           G   +     +   D   +  +      LT      +N S        ++ F ++   + 
Sbjct: 152 G---IFITHYETNFDSTILWYKDGEVRELTKHEGEALNYSPRLV--GERLYFLTNMAWEY 206

Query: 327 -QLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             +  M  +  + K + Q D++  +FD      G  +AFT   G    +  M  
Sbjct: 207 VGVAAMNLSTGEWKYVVQLDRDVEHFDV----DGGYMAFTLNEGGASGLYFMHL 256


>gi|327294867|ref|XP_003232129.1| WD domain-containing protein [Trichophyton rubrum CBS 118892]
 gi|326466074|gb|EGD91527.1| WD domain-containing protein [Trichophyton rubrum CBS 118892]
          Length = 787

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 60/191 (31%), Gaps = 13/191 (6%)

Query: 195 VMDRDGANIR--YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + D+ G  +R  +        ++   FS +  K+A  + D      V + D+       R
Sbjct: 452 LCDKSGFPLRTAFELSHHTNEVWYLEFSHDGTKLATTSRD----CTVLIYDSTTFEIIHR 507

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      +    +S +  +  I+  +D    ++ V         + +      SAS++PD
Sbjct: 508 LTEHSEPVAYATWSPDDTKL-ITCSQDFKAKLWDVP-SGTCLLTIEHHHAPITSASWAPD 565

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               V     + + QL             +   +    D   +P G  +           
Sbjct: 566 GESFV-TGSLDSQSQLCHWSVPHKSL-LYTWPGQYRVRDCAITPDGKRLIAISLQK---R 620

Query: 373 IGVMKKDGSQE 383
           I V      +E
Sbjct: 621 IYVYNFITREE 631



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/219 (11%), Positives = 73/219 (33%), Gaps = 19/219 (8%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISD-------DIYQSITGEKGDFNSRILFVSE 182
           L D   + QI    + ++  S    +  + D         ++        +         
Sbjct: 424 LLDQVKQTQINNCLYHNTAVSPSLYSDHLCDKSGFPLRTAFELSHHTNEVWYLEFSHDGT 483

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + +     ++ + D     I +      + +    +SP+  K+   + D +      L 
Sbjct: 484 KLATTSRDCTVLIYDSTTFEIIHRLTEHSEPVAYATWSPDDTKLITCSQDFK----AKLW 539

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI--YSVDLQSNATERLTNT 300
           D         I +  + I +  ++ +G+   ++   D    +  +SV  +S         
Sbjct: 540 DVPSGTCLLTIEHHHAPITSASWAPDGES-FVTGSLDSQSQLCHWSVPHKSLLYTWPGQY 598

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +   + +PD  +++  S    ++++YV      +++
Sbjct: 599 RVRDC--AITPDGKRLIAISL---QKRIYVYNFITREEE 632


>gi|227111549|ref|ZP_03825205.1| oligogalacturonate lyase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
 gi|227327049|ref|ZP_03831073.1| oligogalacturonate lyase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 388

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 67/183 (36%), Gaps = 32/183 (17%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 ++   +  ++ DG N+R +    +        + P+   + Y +Y  +D  R  
Sbjct: 207 HEGPHDLVDARMWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDTNRYI 266

Query: 241 LMDTRIDRAPKRI----------GNFRSMILAPRFSSNGKRALISVQKDEAMDI------ 284
                +    +++           N+   +L      +G  A + VQ D    I      
Sbjct: 267 RSIDPVTLEDRQLRVMPPCSHLMSNYDGTLLVG----DGSDAPVDVQDDGGYKIENDPFL 322

Query: 285 YSVDLQSNATERLTNTL-FINI----------SASYSPDSSQIVFESDREGKEQLYVMQS 333
           Y  +L++    R+       ++            S++PD+ Q++F SD +GK  LY+ + 
Sbjct: 323 YVFNLKTGKEHRIAQHNTSWDVLEGDRQVTHPHPSFTPDNKQVLFTSDVDGKPALYLAKV 382

Query: 334 NGS 336
             S
Sbjct: 383 PDS 385



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 64/189 (33%), Gaps = 28/189 (14%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKE 326
           +G + L     D   + Y +DL+  +  +LT     N    + SP+   + +  +     
Sbjct: 46  DGSKLLFGAAFDGPWNYYLLDLKEQSATQLTEGKGDNTFGGFLSPNDDALYYVKN---TR 102

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFA------------ 372
            L  +     ++K I Q  +       W    D   +   +   E +             
Sbjct: 103 NLMRVDLATLEEKTIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFY 162

Query: 373 --------IGVMKKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSID 422
                   I V    G  E +L E+  L  P + P    ++ F  +   D   ++++ I+
Sbjct: 163 FTNPCCRLIRVDLITGEAETILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFIN 222

Query: 423 LNGRNETLI 431
            +G N   +
Sbjct: 223 EDGTNMRKV 231



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/227 (8%), Positives = 61/227 (26%), Gaps = 35/227 (15%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MD 283
           +  +   +     +    I    + I      +  P +   +        +         
Sbjct: 158 FQEFYFTNPCCRLIRVDLITGEAETILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDAR 217

Query: 284 IYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQK 339
           ++ ++       ++             + PD S +++ S    +    +  +     + +
Sbjct: 218 MWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDTNRYIRSIDPVTLEDR 277

Query: 340 RISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMKKDGSQERLL 386
           ++      S+    +   G L+                + I       V      +E  +
Sbjct: 278 QLRVMPPCSHLMSNY--DGTLLVGDGSDAPVDVQDDGGYKIENDPFLYVFNLKTGKEHRI 335

Query: 387 VEDSNLQ------------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + +                P+++P  + ++F+   DG     L  +
Sbjct: 336 AQHNTSWDVLEGDRQVTHPHPSFTPDNKQVLFTSDVDGKPALYLAKV 382



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 76/240 (31%), Gaps = 34/240 (14%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F  +  K+ +     +     YL+D +   A +              S N   
Sbjct: 36  NYFYQKCFFNDGSKLLFGA-AFDGPWNYYLLDLKEQSATQLTEGKGDNTFGGFLSPNDDA 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASY--SPDSSQIV----------- 317
                      ++  VDL +   + +       +   ++  + D +++V           
Sbjct: 95  LYYVKN---TRNLMRVDLATLEEKTIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKP 151

Query: 318 ------FESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
                 F+         +L  +     + + I Q+ +     P++ P   + +AF     
Sbjct: 152 LTDWKKFQEFYFTNPCCRLIRVDLITGEAETILQENQW-LGHPIYRPGDDNTVAFCHEGP 210

Query: 369 EKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DG+  R +    E  +     W P G ++I+      DT   + SID
Sbjct: 211 HDLVDARMWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDTNRYIRSID 270



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 37/115 (32%), Gaps = 5/115 (4%)

Query: 281 AMDIYSVDLQSNATERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               Y          RLT               +  D S+++F +  +G    Y++    
Sbjct: 10  TFHTYQDSATGTEVVRLTPPDVICHRNYFYQKCFFNDGSKLLFGAAFDGPWNYYLLDLKE 69

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
               ++++ K  + F    SP  D + + K +     + +   +      + +D 
Sbjct: 70  QSATQLTEGKGDNTFGGFLSPNDDALYYVKNTRNLMRVDLATLEEKTIYQVPDDW 124


>gi|283787609|ref|YP_003367474.1| hypothetical protein ROD_40361 [Citrobacter rodentium ICC168]
 gi|282951063|emb|CBG90741.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
          Length = 408

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 50/154 (32%), Gaps = 18/154 (11%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQL 328
           +          +     RLT T        +N+   +    P   +I F   D +G  QL
Sbjct: 254 EGTDATLPAPPRGVRQRRLTFTHSRRFPGLVNVPRHWVRAHPAGDEIAFLMRDEKGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
           +++ + G + ++++           W P G  + F   +     I            L  
Sbjct: 314 WLISAQGGEPRQLTHHTAGIQSAFNWHPSGKWLGFVLDN----RIACCDAQSGAITFLTP 369

Query: 388 ---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                 +  A  +SP GR + +  + DG     L
Sbjct: 370 QHGHPPSADAVVFSPDGRFIAWMEEVDGYRQLWL 403



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 54/150 (36%), Gaps = 12/150 (8%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G+ +  L          R      +      R  P   ++A+   D++ I++++L+  
Sbjct: 264 PRGVRQRRLTFTHS-----RRFPGLVNVPRHWVRAHPAGDEIAFLMRDEKGIVQLWLISA 318

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +     +   +   +  A  +  +GK     +       I   D QS A   LT      
Sbjct: 319 QGGEPRQLTHHTAGIQSAFNWHPSGKWLGFVLDN----RIACCDAQSGAITFLTPQHGHP 374

Query: 305 ISA---SYSPDSSQIVFESDREGKEQLYVM 331
            SA    +SPD   I +  + +G  QL++ 
Sbjct: 375 PSADAVVFSPDGRFIAWMEEVDGYRQLWLT 404



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 44/143 (30%), Gaps = 22/143 (15%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
             + P  W + AH   D+I   +  EKG                     L ++   G   
Sbjct: 283 LVNVPRHWVR-AHPAGDEIAFLMRDEKGI------------------VQLWLISAQGGEP 323

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R LT     I     + P+ + + +    D  I         I     + G+  S   A 
Sbjct: 324 RQLTHHTAGIQSAFNWHPSGKWLGFVL--DNRIACCDAQSGAITFLTPQHGHPPSAD-AV 380

Query: 264 RFSSNGKRALISVQKDEAMDIYS 286
            FS +G+      + D    ++ 
Sbjct: 381 VFSPDGRFIAWMEEVDGYRQLWL 403


>gi|67525725|ref|XP_660924.1| hypothetical protein AN3320.2 [Aspergillus nidulans FGSC A4]
 gi|40744108|gb|EAA63288.1| hypothetical protein AN3320.2 [Aspergillus nidulans FGSC A4]
          Length = 2088

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 82/237 (34%), Gaps = 16/237 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D +  ++++       ++    FS + + +A A+        V + DT 
Sbjct: 292 SASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASASDST-----VKIWDTG 346

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                  +   R  + +  FS +  + L S   D  + I+  D  + + +  L       
Sbjct: 347 TGSLQHTLEGHRDWVRSVIFSHD-SQLLASASDDSTVKIW--DTGTGSLQHTLEGHRDWV 403

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  +S DS  +   SD      + +  +     +   +         ++S    L+A +
Sbjct: 404 RSVIFSHDSQLLASASD---DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLA-S 459

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   I   +K   +  L    S + + ++S   R L  +     D   +++ I
Sbjct: 460 ASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASN---DQTVRIWDI 513


>gi|124005555|ref|ZP_01690395.1| dipeptidyl peptidase IV [Microscilla marina ATCC 23134]
 gi|123988989|gb|EAY28582.1| dipeptidyl peptidase IV [Microscilla marina ATCC 23134]
          Length = 735

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 52/353 (14%), Positives = 113/353 (32%), Gaps = 72/353 (20%)

Query: 151 WRKIAHTISDDIYQSITGEKG-----DFNSRILFVSESVVSGIIKNSLCVMDR------- 198
           WR+    I+D  + SI  +       D  +  L  +   V    K  L V D        
Sbjct: 121 WRRSG--IADYYFYSIKDKTLKLVAKDAQTAQLSPNGKKVGYERKGDLFVYDFATKKETQ 178

Query: 199 ---DGANIRYLTPSRDQILFEP--------RFSPNQQKVAYATYDDEDIL---------- 237
              DG    +L   R    +E          +SP+ +++A+   D+  +           
Sbjct: 179 LTNDGDEKNFLYNGRYGWAYEEEFGLAQAWTWSPDSKQIAFWQTDERQVPVFQMTDYSKT 238

Query: 238 -----RVYLMDTRIDRAPKRIGNFR-------------SMILAPRF---SSNGKRALISV 276
                ++            +IG                     PR    S  G+ A++ +
Sbjct: 239 HKEWVKIKYPQVGDKNPIVKIGVVDLAQKSRQWMEVALGDGYVPRLYWTSVPGQLAVVHL 298

Query: 277 QKDEA-MDIYSVDLQSNATERLTNTL------------FINISASYSPDSSQIVFESDRE 323
            + +  + ++  + ++   +R+                 IN    +  DS +  + SDR+
Sbjct: 299 NRAQTHLQLFFHNTKTGKGKRVMEEKSKVWIDVFDFFAGINHLFFFPEDSKEFFWISDRD 358

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGS 381
           G   LY    +G    ++++             +   I +     S  +  +  +   G 
Sbjct: 359 GWSHLYRYNYDGKLLNQVTKGNWEVTNVYNVDSKRKKIYYASTEKSPLERHLYSIDFKGK 418

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           +++ L + +      +SP+ +     R  + DT +++      G+    + T 
Sbjct: 419 RKKQLTKTAGRHFINFSPNSQY-YIDRYSNVDTPTQVELWSTKGKKIKSLETN 470



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 47/138 (34%), Gaps = 34/138 (24%)

Query: 298 TNTLFINISASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           T+  F   +  +S DS  ++F+S+      R G    Y         K +++D + +   
Sbjct: 93  TDKPFRYSAFEFSKDSKYLLFKSNFRPVWRRSGIADYYFYSIKDKTLKLVAKDAQTAQL- 151

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-------------------- 391
              SP G  + + +       + V      +E  L  D +                    
Sbjct: 152 ---SPNGKKVGYERKGD----LFVYDFATKKETQLTNDGDEKNFLYNGRYGWAYEEEFGL 204

Query: 392 LQAPTWSPSGRSLIFSRK 409
            QA TWSP  + + F + 
Sbjct: 205 AQAWTWSPDSKQIAFWQT 222


>gi|86157218|ref|YP_464003.1| peptidase S9, prolyl oligopeptidase active site region
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85773729|gb|ABC80566.1| peptidase S9, prolyl oligopeptidase active site region
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 653

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 81/211 (38%), Gaps = 10/211 (4%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + +   T       +++L+   +    +++      +    F      +L+ +Q +
Sbjct: 61  SADGRAML-VTTRFGSTAQLHLVAAPLGT-REQLTFGDEPVSDAAFLPGRPDSLLYLQDE 118

Query: 280 EA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKE-QLYVMQSN 334
                  +Y +D ++  +E LT+    +     SPD  +  +  + R GK+  +YV +++
Sbjct: 119 GGGEFFQLYRLDRRTGRSELLTDGRSRHGDLVVSPDGRRFAYSGTGRNGKDADVYVAETD 178

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQER-LLVEDSNL 392
                R + + E S+    +S  G  +   ++       + ++         LL    ++
Sbjct: 179 RPAAARRAVEAEGSWSPLDFSRDGRRLLVRRYRAASDADLELVDLATGARTPLLAGKGSV 238

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               +S  GR +     +  D  + L  +DL
Sbjct: 239 GGAAFSADGRHVYAITDRGADHAA-LVRVDL 268



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 72/185 (38%), Gaps = 16/185 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD-SSQIVFESDRE 323
            S++G+  L++ +      ++ V       E+LT        A++ P     +++  D  
Sbjct: 60  VSADGRAMLVTTRFGSTAQLHLVAAPLGTREQLTFGDEPVSDAAFLPGRPDSLLYLQDEG 119

Query: 324 GKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKD 379
           G E  QLY +       + ++ D  + + D V SP G   A+  T  +G+   + V + D
Sbjct: 120 GGEFFQLYRLDRRTGRSELLT-DGRSRHGDLVVSPDGRRFAYSGTGRNGKDADVYVAETD 178

Query: 380 GSQERLLVEDSNLQAPTWSP-----SGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT 433
                    ++     +WSP      GR L+  R +   + + L  +DL  G    L+  
Sbjct: 179 RPAAARRAVEAEG---SWSPLDFSRDGRRLLVRRYRAA-SDADLELVDLATGARTPLLAG 234

Query: 434 PAYAS 438
                
Sbjct: 235 KGSVG 239



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 67/420 (15%), Positives = 125/420 (29%), Gaps = 85/420 (20%)

Query: 97  IPRFQDWNSLGAQVL---VTGRVIKEGKDRLRVEFRLWDV-KDRKQIIGKKFFSSPASWR 152
           +P   +   LG   +   V+ R+ +    R  V   L DV  D + ++    F S A   
Sbjct: 24  VPGLPNLLQLGVPEVPPEVSARLEQYENARAAV---LRDVSADGRAMLVTTRFGSTAQLH 80

Query: 153 KIA--------HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
            +A         T  D+         G  +S +L++ +    G     L  +DR      
Sbjct: 81  LVAAPLGTREQLTFGDEPVSDAAFLPGRPDS-LLYLQDEG--GGEFFQLYRLDRRTGRSE 137

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            LT  R +   +   SP+ ++ AY+ T  +     VY+ +T    A +R           
Sbjct: 138 LLTDGRSR-HGDLVVSPDGRRFAYSGTGRNGKDADVYVAETDRPAAARRAVEAEGSWSPL 196

Query: 264 RFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI------ 316
            FS +G+R L+   +     D+  VDL + A   L         A++S D   +      
Sbjct: 197 DFSRDGRRLLVRRYRAASDADLELVDLATGARTPLLAGKGSVGGAAFSADGRHVYAITDR 256

Query: 317 -----------------------------------------VFESDREGKEQLYVMQSNG 335
                                                     F ++ +G   L+ +    
Sbjct: 257 GADHAALVRVDLAHPAAPPRPVAPGVAWDVEQVVVARDGTVAFTANADGVSLLHAVDPRT 316

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLV------- 387
              + +               + DL+A    S    +    ++  G +            
Sbjct: 317 GRLRGVPLPGRGVATLRFPPGRSDLLAVGLVSATSPWDAWTVELRGGKAVRWTRSEVGGL 376

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN---TPAYASDPQWVG 444
           + +    P        + +      +  + LY     GR   ++N    P     P +  
Sbjct: 377 DPAGFVEP------ELVRYPTTGGAEVPAFLYRPRGGGRAPVVVNWHGGPEGQHRPAFSP 430


>gi|5758067|gb|AAD50657.1|AF135787_1 Ogl [Pectobacterium carotovorum subsp. carotovorum]
          Length = 388

 Score = 65.4 bits (158), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 67/183 (36%), Gaps = 32/183 (17%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 ++   +  ++ DG N+R +    +        + P+   + Y +Y  +D  R  
Sbjct: 207 HEGPHDLVDARMWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDTNRYI 266

Query: 241 LMDTRIDRAPKRI----------GNFRSMILAPRFSSNGKRALISVQKDEAMDI------ 284
                +    +++           N+   +L      +G  A + VQ D    I      
Sbjct: 267 RSIDPVTLEDRQLRVMPPCSHLMSNYDGTLLVG----DGSDAPVDVQDDGGYKIENDPFL 322

Query: 285 YSVDLQSNATERLTNTL-FINI----------SASYSPDSSQIVFESDREGKEQLYVMQS 333
           Y  +L++    R+       ++            S++PD+ Q++F SD +GK  LY+ + 
Sbjct: 323 YVFNLKTGKEHRIAQHNTSWDVLEGDRQVTHPHPSFTPDNKQVLFTSDVDGKPALYLAKV 382

Query: 334 NGS 336
             S
Sbjct: 383 PDS 385



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 64/189 (33%), Gaps = 28/189 (14%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKE 326
           +G + L     D   + Y +DL+  +  +LT     N    + SP+   + +  +     
Sbjct: 46  DGSKLLFGAAFDGPWNYYLLDLKEQSATQLTEGKGDNTFGGFLSPNDDALYYVKN---TR 102

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFA------------ 372
            L  +     ++K I Q  +       W    D   +   +   E +             
Sbjct: 103 NLMRVDLATLEEKTIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFY 162

Query: 373 --------IGVMKKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSID 422
                   I V    G  E +L E+  L  P + P    ++ F  +   D   ++++ I+
Sbjct: 163 FTNPCCRLIRVDLITGEAETILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFIN 222

Query: 423 LNGRNETLI 431
            +G N   +
Sbjct: 223 EDGTNMRKV 231



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/227 (8%), Positives = 61/227 (26%), Gaps = 35/227 (15%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MD 283
           +  +   +     +    I    + I      +  P +   +        +         
Sbjct: 158 FQEFYFTNPCCRLIRVDLITGEAETILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDAR 217

Query: 284 IYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQK 339
           ++ ++       ++             + PD S +++ S    +    +  +     + +
Sbjct: 218 MWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDTNRYIRSIDPVTLEDR 277

Query: 340 RISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMKKDGSQERLL 386
           ++      S+    +   G L+                + I       V      +E  +
Sbjct: 278 QLRVMPPCSHLMSNY--DGTLLVGDGSDAPVDVQDDGGYKIENDPFLYVFNLKTGKEHRI 335

Query: 387 VEDSNLQ------------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + +                P+++P  + ++F+   DG     L  +
Sbjct: 336 AQHNTSWDVLEGDRQVTHPHPSFTPDNKQVLFTSDVDGKPALYLAKV 382



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 76/240 (31%), Gaps = 34/240 (14%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F  +  K+ +     +     YL+D +   A +              S N   
Sbjct: 36  NYFYQKCFFNDGSKLLFGA-AFDGPWNYYLLDLKEQSATQLTEGKGDNTFGGFLSPNDDA 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASY--SPDSSQIV----------- 317
                      ++  VDL +   + +       +   ++  + D +++V           
Sbjct: 95  LYYVKN---TRNLMRVDLATLEEKTIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKP 151

Query: 318 ------FESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
                 F+         +L  +     + + I Q+ +     P++ P   + +AF     
Sbjct: 152 LTDWKKFQEFYFTNPCCRLIRVDLITGEAETILQENQW-LGHPIYRPGDDNTVAFCHEGP 210

Query: 369 EKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DG+  R +    E  +     W P G ++I+      DT   + SID
Sbjct: 211 HDLVDARMWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDTNRYIRSID 270



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 37/115 (32%), Gaps = 5/115 (4%)

Query: 281 AMDIYSVDLQSNATERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               Y          RLT               +  D S+++F +  +G    Y++    
Sbjct: 10  TFHTYQDSATGTEVVRLTPPDVICHRNYFYQKCFFNDGSKLLFGAAFDGPWNYYLLDLKE 69

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
               ++++ K  + F    SP  D + + K +     + +   +      + +D 
Sbjct: 70  QSATQLTEGKGDNTFGGFLSPNDDALYYVKNTRNLMRVDLATLEEKTIYQVPDDW 124


>gi|311748068|ref|ZP_07721853.1| hypothetical protein ALPR1_17228 [Algoriphagus sp. PR1]
 gi|311302744|gb|EAZ79093.2| hypothetical protein ALPR1_17228 [Algoriphagus sp. PR1]
          Length = 1090

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 62/192 (32%), Gaps = 13/192 (6%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +        + + +         +PK IG    +    +FS +G      +       + 
Sbjct: 262 ITVNEQVYNNFIDIDQKGAIASTSPKVIGKINDI----KFSPDGLNLAYVINNAGKYKVQ 317

Query: 286 SVDLQSNATERLTNTLFI--NISASYSP------DSSQIVFESDREGKEQLYVMQSNGSD 337
             ++ S     +     +  +   +YS       DS+ +   S + G   L +   +GS 
Sbjct: 318 IREISSGNERTILQGGAVYQDQEPNYSSPVIAWKDSANLAIASFKRGTTLLRLRSIDGSS 377

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           Q +I            ++  G  +  +  S  K  +  +   G  +RL  +  +   P +
Sbjct: 378 QDKIYLRNITQILSLDFNESGRNMVLSAISNGKTDVYTLNTRGQGKRLTNDIFDDLTPAF 437

Query: 398 SPSGRSLIFSRK 409
                 +++S  
Sbjct: 438 LNDST-IVYSSN 448



 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 69/225 (30%), Gaps = 38/225 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS------NGKR 271
           +FSP+   +AY   +           +  +      G        P +SS      +   
Sbjct: 296 KFSPDGLNLAYVINNAGKYKVQIREISSGNERTILQGGAVYQDQEPNYSSPVIAWKDSAN 355

Query: 272 ALISVQKDEAMDIYSVDLQSNA-----TERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             I+  K     +    +  ++        +T  L ++    ++     +V  +   GK 
Sbjct: 356 LAIASFKRGTTLLRLRSIDGSSQDKIYLRNITQILSLD----FNESGRNMVLSAISNGKT 411

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----------------GEK 370
            +Y + + G   KR++ D       P +     ++  + F+                   
Sbjct: 412 DVYTLNTRGQG-KRLTNDIF-DDLTPAFLNDSTIVYSSNFTELPDSLDTKNISLDSLPNF 469

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSP---SGRSLIFSRKKDG 412
           + + +M+       +  + +N  +    P   +   ++F     G
Sbjct: 470 YNLYLMEV--GDSIVTTKLTNTNSKNIYPRKLNSNQVVFLSDLSG 512


>gi|255535191|ref|YP_003095562.1| hypothetical protein FIC_01050 [Flavobacteriaceae bacterium
           3519-10]
 gi|255341387|gb|ACU07500.1| hypothetical protein FIC_01050 [Flavobacteriaceae bacterium
           3519-10]
          Length = 647

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 59/185 (31%), Gaps = 10/185 (5%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +   K+    RS         NGK  ++  +      ++ +       ++LT       S
Sbjct: 45  NEKIKKYSESRSANFT-AIHPNGKELIMVTRFASTNQLHKLSSAMGNRKQLTFFDEPVNS 103

Query: 307 ASYSP-DSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           ASY P     +V+  D  G E  QL+ +     +   ++    +      W   G    F
Sbjct: 104 ASYEPTKGEYLVYSKDIGGNEFGQLFRLDLKTMESTLLTDGGRSQNGGVTWLKDGSGFYF 163

Query: 364 TK--FSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +    +G    I  M      E  LV   +         S  G+ LI       +  S L
Sbjct: 164 SSTKRNGGDRDIYFMNPLKPAETKLVLQLKSGGWGINDISDDGKKLIIGEYVSAN-ESHL 222

Query: 419 YSIDL 423
           Y  D 
Sbjct: 223 YLFDT 227



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 77/237 (32%), Gaps = 24/237 (10%)

Query: 204 RYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDIL-RVYLMDTRIDRAPKRIGNFRSMIL 261
           R      D+ +    + P   + + Y+     +   +++ +D +   +       RS   
Sbjct: 91  RKQLTFFDEPVNSASYEPTKGEYLVYSKDIGGNEFGQLFRLDLKTMESTLLTDGGRSQNG 150

Query: 262 APRFSSNGKRALISVQK--DEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSS 314
              +  +G     S  K      DIY ++    A  +L     +    IN     S D  
Sbjct: 151 GVTWLKDGSGFYFSSTKRNGGDRDIYFMNPLKPAETKLVLQLKSGGWGIND---ISDDGK 207

Query: 315 QIV---FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGE 369
           +++   + S  E    LY+  +     + I+  KE         +S   D I +      
Sbjct: 208 KLIIGEYVSANE--SHLYLFDTQTQKLESITDRKEKQIVQGSAKFSKNADEIWYVTDRDN 265

Query: 370 KF-AIGVMKKDGSQERLLVEDSNLQAPTW--SPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +F  +  +     +      D   +   +  S     ++F   + G    KLY +D 
Sbjct: 266 EFDRLATLNLKTKKRNYFTSDIPWEVSDYTLSEDKSKIVFQTNESG--LHKLYLMDT 320



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 87/257 (33%), Gaps = 24/257 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFE--PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           L + D     +  +T  +++ + +   +FS N  ++ Y T  D +  R+  ++ +  +  
Sbjct: 222 LYLFDTQTQKLESITDRKEKQIVQGSAKFSKNADEIWYVTDRDNEFDRLATLNLKTKKRN 281

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---TERLTNTLFINISA 307
               +    +     S +  + +    +     +Y +D  SN     + L   L  N   
Sbjct: 282 YFTSDIPWEVSDYTLSEDKSKIVFQTNESGLHKLYLMDTASNKYSEIKGLAVGLVNNFE- 340

Query: 308 SYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++ D   + F  S  +    +Y +    +  +R +  ++        S +  LI +  F
Sbjct: 341 -FTNDGRSLFFSQSTYDSSADIYRLDLASNTIERWTDSEQGEMQKADMS-EPKLIEWNSF 398

Query: 367 S----GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS-----------GRSLIFSRKKD 411
                   +     K  G +  L+      +  + + S           G +LI+   + 
Sbjct: 399 DQMKITGFYYPASKKFTGKRPVLINIHGGPEGQSMASSLGSGNYYTNEMGVALIYPNVRG 458

Query: 412 GDTGSKLYSIDLNGRNE 428
                K Y    NG N 
Sbjct: 459 SSGFGKTYIASDNGFNR 475


>gi|110638407|ref|YP_678616.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110281088|gb|ABG59274.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 509

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 71/220 (32%), Gaps = 35/220 (15%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE----- 295
           L++  +      I   +    AP  S++GK  +    K     +Y    Q+ A       
Sbjct: 32  LINPGLRSLGSPINTLQFSEFAPTISADGKTLIYESDKSGRWRLYISYQQNGAWSEPKDM 91

Query: 296 -----RLTNTLFINISASYSPDSSQIVFESDREGK---------EQLYVMQSNGSDQKRI 341
                R+    FI     +S D +++ F S+ +G          E++  +     +  R 
Sbjct: 92  DVINNRVQPGDFI-GGPCFSYDGNRLYFTSNMKGTVGGMDLWYSEKINDVWQAPKNMGR- 149

Query: 342 SQDKEASYFDPVWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERL-------LVE 388
           + +       P  SP    + F         +G++  I +  +      +        V 
Sbjct: 150 TVNTAGYDGFPCVSPDNKTLYFMRAGNSNSPTGQRCCILMYAEKRGNYFINPKALPAPVN 209

Query: 389 DSNLQAPTWSPSGRSLIFSRKK-DGDTGSKLYSIDLNGRN 427
                 P     G++LIFS  +  G  G  LY     G  
Sbjct: 210 TGCEGYPRIMADGKTLIFSSYRTSGKGGYDLYQSKKTGSK 249



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 62/213 (29%), Gaps = 38/213 (17%)

Query: 150 SWRKIAHTISDD----IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
            + + A TIS D    IY+  + + G +   I +      S          D D  N R 
Sbjct: 48  QFSEFAPTISADGKTLIYE--SDKSGRWRLYISYQQNGAWSEPK-------DMDVINNRV 98

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR----IDRAPK---RIGNFRS 258
                   +  P FS +  ++ + +     +  + L  +     + +APK   R  N   
Sbjct: 99  Q---PGDFIGGPCFSYDGNRLYFTSNMKGTVGGMDLWYSEKINDVWQAPKNMGRTVNTAG 155

Query: 259 MILAPRFSSNGKRALI-----SVQKDEAMDIYSVDLQSN-----ATERLTN--TLFINIS 306
               P  S + K         S           +  +         + L           
Sbjct: 156 YDGFPCVSPDNKTLYFMRAGNSNSPTGQRCCILMYAEKRGNYFINPKALPAPVNTGCEGY 215

Query: 307 ASYSPDSSQIVFESDRE---GKEQLYVMQSNGS 336
                D   ++F S R    G   LY  +  GS
Sbjct: 216 PRIMADGKTLIFSSYRTSGKGGYDLYQSKKTGS 248


>gi|315125787|ref|YP_004067790.1| dipeptidyl peptidase IV [Pseudoalteromonas sp. SM9913]
 gi|315014301|gb|ADT67639.1| dipeptidyl peptidase IV [Pseudoalteromonas sp. SM9913]
          Length = 741

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 49/191 (25%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAP------------- 263
           +FSP+  +V Y     +D  R  L +  + D   + + +   +   P             
Sbjct: 46  KFSPDGSRVTYLQGKTDDYNRYDLWEYNLKDNTNRLLVDSAQLFSGPENLSDEEKARRER 105

Query: 264 -----------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                      ++S +GK  L  +  D    +Y  DL +  +++LTNT      A +SP 
Sbjct: 106 QRIFGKGILEYKWSKDGKALLFPLNGD----LYYYDLDAKNSKKLTNTDAFETDARFSPK 161

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA----------------SYFDPVWSP 356
            + + F  +    + LY ++     + ++S+D                         W+ 
Sbjct: 162 GNFVSFIRE----QNLYALELASGKEIQLSKDGGGVIKNGMAEFVAQEEMSRMTGYWWAN 217

Query: 357 QGDLIAFTKFS 367
               IAFT+  
Sbjct: 218 DESKIAFTRVD 228



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 35/177 (19%)

Query: 265 FSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           FS +G R              D++  +L+ N     TN L ++ +  +S           
Sbjct: 47  FSPDGSRVTYLQGKTDDYNRYDLWEYNLKDN-----TNRLLVDSAQLFS----------- 90

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G E L   +    +++RI         +  WS  G  + F         +     D  
Sbjct: 91  --GPENLSDEEKARRERQRIFGKG---ILEYKWSKDGKALLF----PLNGDLYYYDLDAK 141

Query: 382 QERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             + L      +    +SP G  + F R+++      LY+++L    E  ++     
Sbjct: 142 NSKKLTNTDAFETDARFSPKGNFVSFIREQN------LYALELASGKEIQLSKDGGG 192


>gi|289667494|ref|ZP_06488569.1| dipeptidyl peptidase IV [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 770

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 56/394 (14%), Positives = 113/394 (28%), Gaps = 102/394 (25%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
             D +  +  ++ +     R         +Y     E G     +L   +   + I   +
Sbjct: 119 TADGRYRLNVRYTAVVCDARA----RCSKLYAKDQPEPG-----VLSPDKRSEAFIRDWN 169

Query: 193 LCVMD----------RDG-ANIRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILR 238
           L V D          RDG  N  Y T +      +     +SP+  K+A    D      
Sbjct: 170 LWVRDLASGQETQLTRDGVENFGYATDNAGWQHTDNAIVAWSPDSSKIATFQQDQRKTGD 229

Query: 239 VYLMDTRIDRAPKR--------------------------------------------IG 254
           +YL+ T++     +                                            + 
Sbjct: 230 MYLVSTKLGHPELQSWKYPLAGDKDVTLIERVIIDVPTCSVLRLKTPPDQHRSTLCDDVS 289

Query: 255 NFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATE------RLTNTLFINIS 306
               +    +++ + K      + +  +   +   D  + A          T      ++
Sbjct: 290 CSPGLWDDVKWAPDSKTLAFASTSRFHKQTWLRIADASTGAVRTAFNETVKTYYESGQVA 349

Query: 307 ASYS--PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           A+++  P S++ V+ S+R    QLY+        KR     E +  + +        A+ 
Sbjct: 350 ANWAYLPASNEAVWFSERSDWGQLYLYDLATGKPKRAITTGEGNVTELLRVDPATRTAWF 409

Query: 365 KFSGEK-------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSRKK----- 410
              G           +  +  DG +  LL  +    +   SP G   +  +S        
Sbjct: 410 VGVGRSAGVDPYYQQLWKVSLDGGEPVLLTPEPANHSIALSPDGARFVDTYSTSVTPPVT 469

Query: 411 ------DGDTGSKLYSIDLNGRNETLINTPAYAS 438
                 DG T S + + D+     T +    +  
Sbjct: 470 LLREAGDGRTVSTIVTADI-----TRLKAAGWVP 498


>gi|284053294|ref|ZP_06383504.1| WD-40 repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 182

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 15/140 (10%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +V  S+    +++ V+  +GS   R+  + + S +   +SPQGD+IA      
Sbjct: 1   FSPDGKMVVTGSE---DKEVRVVYIDGSG-TRLIGNHQGSVWGVAFSPQGDMIASASTDN 56

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS---IDLNG 425
               + +   DG +  +L     +    +SP G  +  +     D   +L++   + L  
Sbjct: 57  T---VRLWFLDGRKSIVLHHQGIVDHVAFSPDGEMIASASW---DGTIQLWTNEGVKLKT 110

Query: 426 --RNETLINTPAYASDPQWV 443
             R++  + T A+++D +W+
Sbjct: 111 LIRHQGPVRTVAFSNDGKWI 130



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 12/142 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK  +      E  ++  V +  + T  + N        ++SP    I   S  + 
Sbjct: 1   FSPDGKMVV---TGSEDKEVRVVYIDGSGTRLIGNHQGSVWGVAFSPQGDMIASAST-DN 56

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             +L+ +      +K I    +       +SP G++IA   + G    I +   +G + +
Sbjct: 57  TVRLWFLD----GRKSIVLHHQGIVDHVAFSPDGEMIASASWDGT---IQLWTNEGVKLK 109

Query: 385 LLV-EDSNLQAPTWSPSGRSLI 405
            L+     ++   +S  G+ +I
Sbjct: 110 TLIRHQGPVRTVAFSNDGKWII 131



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 55/144 (38%), Gaps = 13/144 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + V   + D +++  VY+  +      + IGN +  +    FS  G     S   
Sbjct: 1   FSPDGKMVVTGSED-KEVRVVYIDGSGT----RLIGNHQGSVWGVAFSPQGDMIA-SAST 54

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + ++ +D     +  L +   I    ++SPD   I   S  +G  QL+    N   +
Sbjct: 55  DNTVRLWFLD--GRKSIVL-HHQGIVDHVAFSPDGEMIASAS-WDGTIQLWT---NEGVK 107

Query: 339 KRISQDKEASYFDPVWSPQGDLIA 362
            +     +       +S  G  I 
Sbjct: 108 LKTLIRHQGPVRTVAFSNDGKWII 131



 Score = 39.6 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S    N++ +   DG   + +      I+    FSP+ + +A A++D      + L  T 
Sbjct: 51  SASTDNTVRLWFLDG--RKSIVLHHQGIVDHVAFSPDGEMIASASWDG----TIQLW-TN 103

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                K +   +  +    FS++GK  +
Sbjct: 104 EGVKLKTLIRHQGPVRTVAFSNDGKWII 131


>gi|242033127|ref|XP_002463958.1| hypothetical protein SORBIDRAFT_01g009580 [Sorghum bicolor]
 gi|241917812|gb|EER90956.1| hypothetical protein SORBIDRAFT_01g009580 [Sorghum bicolor]
          Length = 319

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 74/211 (35%), Gaps = 16/211 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +R       + +   +FSP+ + +A A+ D      + +  +        +      
Sbjct: 14  GYVLRSTLEGHRRAVSTVKFSPDGRLLASASADK----LLRVWSSSDLSPVAELAGHGEG 69

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIV 317
           +    FS +G+    S   D  + I+ + +   A   + LT         S+SP  + + 
Sbjct: 70  VSDLSFSPDGRLLA-SASDDRTVRIWDLAVGGGARLIKTLTGHTNYAFCVSFSPHGNVLA 128

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S     E + V +       R+            +  +GD+I    + G      V  
Sbjct: 129 SGSF---DETVRVWEVRSGKCLRVLPAHSEPVTAVDFDREGDMIVSGSYDG---LCRVWD 182

Query: 378 KDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
                  + L++D +  +    +SP+G+ ++
Sbjct: 183 STTGHCVKTLIDDESPPVSFAKFSPNGKFIL 213


>gi|145352435|ref|XP_001420554.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580788|gb|ABO98847.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1484

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/268 (17%), Positives = 88/268 (32%), Gaps = 34/268 (12%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+            + +I FVSE+         + +   DG     L+ +  +    PR 
Sbjct: 137 DESVLGYYRLPTMASGKIAFVSETN--------IWIASADGGVASRLSSTYSR-EGVPRL 187

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--Q 277
           SP+   +A+      D   V++  T    A +     ++  +A  +  + +  LIS    
Sbjct: 188 SPDGSHIAFLGLTY-DGYDVFVAPTDGGVATQVTFGGKTQDIA-DWPEDNEILLISTAFS 245

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--------EGKEQ-- 327
           K  +  + +++  + A   L     I             VF   R        EG EQ  
Sbjct: 246 KSASTQLVTLNPDTRAMSPLPFARAIEG---VKESGGCYVFVPLRQTSSTKRYEGGEQSR 302

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQ-------GDLIAFTKFSGEKFAIGVMKKDG 380
           L+      S+ K ++ ++        WSP         + I F         +  M  DG
Sbjct: 303 LWRWCRADSEAKPLTPEETWGVRG-AWSPSVSVAKGLENFIFFISDKSGVANVWSMTTDG 361

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                L  +       ++  G  L++ R
Sbjct: 362 EFAMQLTNECLFDVQEFTVDGDVLVYRR 389



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 60/187 (32%), Gaps = 22/187 (11%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +     +     +I+          RL++T         SPD S I F         ++V
Sbjct: 153 KIAFVSE----TNIWIASADGGVASRLSSTYSREGVPRLSPDGSHIAFLGLTYDGYDVFV 208

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLI----AFTKFSGEKFAIGVMKKDGSQERLL 386
             ++G    +++   +       W    +++    AF+K +  +  +  +  D      L
Sbjct: 209 APTDGGVATQVTFGGKTQDIA-DWPEDNEILLISTAFSKSASTQ--LVTLNPDTRAMSPL 265

Query: 387 VEDSNLQAPTWSPSGRSLIF--------SRKKDGDTGSKLYSI-DLNGRNETLINTPAYA 437
                ++    S  G   +F        +++ +G   S+L+     +   + L     + 
Sbjct: 266 PFARAIEGVKES--GGCYVFVPLRQTSSTKRYEGGEQSRLWRWCRADSEAKPLTPEETWG 323

Query: 438 SDPQWVG 444
               W  
Sbjct: 324 VRGAWSP 330



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFA-IGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +   WSP    IAF K     F+ I V+    G   R+     N  +P +SP G  L 
Sbjct: 677 GVYGLAWSPDSSYIAFAKDEENDFSSIHVLNVTSGESTRITTPSYNAHSPKFSPDGLYLY 736

Query: 406 FSRKKD 411
           +   + 
Sbjct: 737 YFSDQQ 742



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSN 292
               VY     I      +  FR   +    +S +      +  ++++   I+ +++ S 
Sbjct: 652 KASSVYADIDGIASIDTMLNGFRPEGVYGLAWSPDSSYIAFAKDEENDFSSIHVLNVTSG 711

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDRE 323
            + R+T   +   S  +SPD   + + SD++
Sbjct: 712 ESTRITTPSYNAHSPKFSPDGLYLYYFSDQQ 742



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 3/85 (3%)

Query: 196 MDRDG-ANIRYLTPS-RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            D DG A+I  +    R + ++   +SP+   +A+A  ++ D   +++++        RI
Sbjct: 658 ADIDGIASIDTMLNGFRPEGVYGLAWSPDSSYIAFAKDEENDFSSIHVLNV-TSGESTRI 716

Query: 254 GNFRSMILAPRFSSNGKRALISVQK 278
                   +P+FS +G        +
Sbjct: 717 TTPSYNAHSPKFSPDGLYLYYFSDQ 741



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 308 SYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           ++SPDSS I F  D E     ++V+     +  RI+     +   P +SP G  + +
Sbjct: 682 AWSPDSSYIAFAKDEENDFSSIHVLNVTSGESTRITT-PSYNAHSPKFSPDGLYLYY 737



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
            WSP    + F++ ++ D  S ++ +++     T I TP+Y A  P++  
Sbjct: 682 AWSPDSSYIAFAKDEENDF-SSIHVLNVTSGESTRITTPSYNAHSPKFSP 730


>gi|254409493|ref|ZP_05023274.1| hypothetical protein MC7420_7126 [Microcoleus chthonoplastes PCC
           7420]
 gi|196183490|gb|EDX78473.1| hypothetical protein MC7420_7126 [Microcoleus chthonoplastes PCC
           7420]
          Length = 748

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 95/252 (37%), Gaps = 21/252 (8%)

Query: 164 QSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +++TG  G  N+  +      V+SG    +L V + +     +       I+     +P+
Sbjct: 156 RTLTGHSGVVNAVAVTPDSKWVISGAEDYTLKVWELETGRELFSLNGHTGIVKSVTITPD 215

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKD 279
            + V   + D    L+++ ++T+     K +   +   ++      + +GK  +IS   D
Sbjct: 216 GKWVISGSVD--KTLKIWDLETK-----KELFTLKGHTMSVDTVTVTPDGK-CVISGSND 267

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + + +++++ +  A   L        + + +PDS +++  S   G   L +       + 
Sbjct: 268 KTLKVWNLETEEEAFT-LIGHTDRVAALAVTPDSKRVISAS---GDNTLKIWNLATGKEL 323

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS- 398
                          +P G  I           I +   + ++E L +   N    + + 
Sbjct: 324 LTLNGHTKWVESVAVTPDGKRIISGSHDET---IKIWDLETAREVLTIRGHNDSVESVAV 380

Query: 399 -PSGRSLIFSRK 409
            P G+ LI S +
Sbjct: 381 TPDGKRLIASSR 392



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 93/302 (30%), Gaps = 30/302 (9%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKG---DFNSRILFVSESVVSGIIKNSLCVMD 197
            K       + R  AH ++ D  Q      G    F    +    +      +  L  + 
Sbjct: 85  AKTLTLIEETIRLSAHILAADKNQLAAQLWGRLMAFELPEIQALLAQAKPQNQPWLRPLT 144

Query: 198 RD----GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
                 G  +R        ++     +P+ + V     D      + + +    R    +
Sbjct: 145 SSLMPPGTPLRRTLTGHSGVVNAVAVTPDSKWVISGAED----YTLKVWELETGRELFSL 200

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP 311
                ++ +   + +GK  +IS   D+ + I+  DL++         +T+ ++   + +P
Sbjct: 201 NGHTGIVKSVTITPDGKW-VISGSVDKTLKIW--DLETKKELFTLKGHTMSVDTV-TVTP 256

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   ++  S+    + L V      ++                +P    +          
Sbjct: 257 DGKCVISGSN---DKTLKVWNLETEEEAFTLIGHTDRVAALAVTPDSKRVISASGDNT-- 311

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWS--PSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + +      +E L +        + +  P G+ +I       D   K++  DL    E 
Sbjct: 312 -LKIWNLATGKELLTLNGHTKWVESVAVTPDGKRIISGSH---DETIKIW--DLETAREV 365

Query: 430 LI 431
           L 
Sbjct: 366 LT 367



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 78/226 (34%), Gaps = 13/226 (5%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S+ V+S    N+L + +              + +     +P+ +++   ++D+     + 
Sbjct: 300 SKRVISASGDNTLKIWNLATGKELLTLNGHTKWVESVAVTPDGKRIISGSHDE----TIK 355

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTN 299
           + D    R    I      + +   + +GKR + S +    + I   DL++      L  
Sbjct: 356 IWDLETAREVLTIRGHNDSVESVAVTPDGKRLIASSR----IIIKVWDLETGKELLPLIG 411

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 + + +PD  Q++  S     E + +       +    +    S  D   +P   
Sbjct: 412 HSDWVGTVAVTPDGKQVISGSY---DETIKIWSLESGREFFPLKGHTDSINDLAVTPDSK 468

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             A +        +  ++   S   L      ++A   +P G+ +I
Sbjct: 469 H-AISASEDNTLKVWNLETSESIFTLKGHTDPVKALAVTPDGKQVI 513


>gi|113475867|ref|YP_721928.1| WD-40 repeat-containing protein [Trichodesmium erythraeum IMS101]
 gi|110166915|gb|ABG51455.1| WD-40 repeat [Trichodesmium erythraeum IMS101]
          Length = 464

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 92/247 (37%), Gaps = 23/247 (9%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           +G     +    D I      SP+ + +   ++D+     + L +    +  + + +   
Sbjct: 84  NGQLFHTINAHADAIESL-VISPDGKFIISGSWDN----DIKLWNITNGKFIQTLKSHAD 138

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            + A   S +G+    S   +  + I+  +L++ + +      +  I+ ++SPD   +  
Sbjct: 139 DVKAIAMSKDGQTLA-SGSYNGVIKIW--NLKTGSLKMKIKQPYPIIALAFSPDGEILA- 194

Query: 319 ESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                G  K  +   + N   +         + +   +SP G ++A +    +K  +  +
Sbjct: 195 ----SGCKKGNIKTWELNTGKELHSFAAHTKTIWAIAFSPDGKILA-SGSQDQKVKLWEI 249

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           +K      L   D  + +  +SP  + +  S     D+   L+ ++  G+   L+ T   
Sbjct: 250 EKGQLHSTLENHDQAVLSVDFSPDSKIVAGSSY---DSKIHLWQVE-TGK---LLETFTG 302

Query: 437 ASDPQWV 443
            S   W 
Sbjct: 303 HSQAVWS 309



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 97/295 (32%), Gaps = 35/295 (11%)

Query: 134 KDRKQIIGKKFFSSPASWR----KIAHTI---SDDIYQSITGEKGDFNSRILFVSESVVS 186
            D K +           W     ++ HTI   +D I   +    G F          ++S
Sbjct: 63  ADGKTLTSSSHDGKIKVWNLTNGQLFHTINAHADAIESLVISPDGKF----------IIS 112

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G   N + + +           S    +     S + Q +A  +Y+      + + + + 
Sbjct: 113 GSWDNDIKLWNITNGKFIQTLKSHADDVKAIAMSKDGQTLASGSYNG----VIKIWNLKT 168

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                +I      I+A  FS +G   L S  K   +  + ++                 +
Sbjct: 169 GSLKMKI-KQPYPIIALAFSPDG-EILASGCKKGNIKTWELN-TGKELHSFAAHTKTIWA 225

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPD   +   S     +++ + +          ++ + +     +SP   ++A + +
Sbjct: 226 IAFSPDGKILASGSQ---DQKVKLWEIEKGQLHSTLENHDQAVLSVDFSPDSKIVAGSSY 282

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLY 419
                 I + + +  +        +    +  ++P G++L+       D   KL+
Sbjct: 283 DS---KIHLWQVETGKLLETFTGHSQAVWSLKFTPDGQTLVSGST---DRNIKLW 331



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 90/288 (31%), Gaps = 39/288 (13%)

Query: 106 LGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS 159
           + A       ++     +  +        +LW++ + K I   K           +H  +
Sbjct: 91  INAHADAIESLVISPDGKFIISGSWDNDIKLWNITNGKFIQTLK-----------SH--A 137

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           DD+      + G          +++ SG     + + +    +++        I+    F
Sbjct: 138 DDVKAIAMSKDG----------QTLASGSYNGVIKIWNLKTGSLKMKIKQPYPIIAL-AF 186

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +A           +   +    +           I A  FS +GK  L S  +D
Sbjct: 187 SPDGEILA----SGCKKGNIKTWELNTGKELHSFAAHTKTIWAIAFSPDGK-ILASGSQD 241

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + + ++ ++ +      L N     +S  +SPDS  +          ++++ Q       
Sbjct: 242 QKVKLWEIE-KGQLHSTLENHDQAVLSVDFSPDSKIVA---GSSYDSKIHLWQVETGKLL 297

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                   + +   ++P G  +             +   +  Q +   
Sbjct: 298 ETFTGHSQAVWSLKFTPDGQTLVSGSTDRNIKLWCLSNLNTQQLQNTT 345



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 47/117 (40%), Gaps = 6/117 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG     + + + +   +     + DQ +    FSP+ + VA ++YD +    ++L    
Sbjct: 237 SGSQDQKVKLWEIEKGQLHSTLENHDQAVLSVDFSPDSKIVAGSSYDSK----IHLWQVE 292

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATERLTNTL 301
             +  +        + + +F+ +G+  + S   D  + ++   +L +   +  T   
Sbjct: 293 TGKLLETFTGHSQAVWSLKFTPDGQTLV-SGSTDRNIKLWCLSNLNTQQLQNTTFRP 348


>gi|158315566|ref|YP_001508074.1| WD-40 repeat-containing protein [Frankia sp. EAN1pec]
 gi|158110971|gb|ABW13168.1| WD-40 repeat protein [Frankia sp. EAN1pec]
          Length = 405

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 22/210 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + +A    D+   L      T        +      +    +S +G+    +  
Sbjct: 195 AYSPDGRTLATGGLDNTLRLWDVTDRTNPTPLGPPLTGHTKTVAFLAYSPDGRTLA-TGS 253

Query: 278 KDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D  + ++ V  +++       LT      +S +YSPD   +   S  +   + +    +
Sbjct: 254 YDRTVRLWDVSDRTSPAPLGPPLTGHTNPLMSLAYSPDGRTLA-TSASDYSTRFW----D 308

Query: 335 GSDQKRISQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            SD+ R +   E                 +SP G  +A            V  +     R
Sbjct: 309 VSDRTRPTPLGEPIFLGDSPSVWWVVGLAYSPDGHTLATISGDRLVRFWDVTDRTRPTLR 368

Query: 385 --LLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
              L + ++ L++  +SP GR+L  S    
Sbjct: 369 GQTLTDQTDRLESVAFSPDGRTLATSSDDG 398



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 81/251 (32%), Gaps = 18/251 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A +          +    FSP+ + +A  + DD          T      K +      I
Sbjct: 82  APLEKTLYGHTGWVRSVVFSPDGRTLASGSDDDTVRFWDMSDPTDPTPLGKPLTGHTDPI 141

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQ------SNATERL-TNTLFINISASYSPDS 313
            A  +S +G+    +   D  +  + +  +           R  T+      + +YSPD 
Sbjct: 142 AAVAYSPDGRTLA-TSSTDRTVRFWDMSDRADPTPLGKPLTRHSTDPTSWVAAMAYSPDG 200

Query: 314 SQIVFESDREGKEQLYVM--QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             +      +   +L+ +  ++N +           +     +SP G  +A   +     
Sbjct: 201 RTLA-TGGLDNTLRLWDVTDRTNPTPLGPPLTGHTKTVAFLAYSPDGRTLATGSYDRTVR 259

Query: 372 AIGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              V  +         L    + L +  +SP GR+L  S     D  ++ + +  +    
Sbjct: 260 LWDVSDRTSPAPLGPPLTGHTNPLMSLAYSPDGRTLATSAS---DYSTRFWDVS-DRTRP 315

Query: 429 TLINTPAYASD 439
           T +  P +  D
Sbjct: 316 TPLGEPIFLGD 326



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 51/172 (29%), Gaps = 16/172 (9%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQI--IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
                       RLWDV DR     +G            +A        +++     D++
Sbjct: 247 RTLATGSYDRTVRLWDVSDRTSPAPLGPPLTGHTNPLMSLA---YSPDGRTLATSASDYS 303

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +R   VS+      +          G  I          +    +SP+   +A  + D  
Sbjct: 304 TRFWDVSDRTRPTPL----------GEPIFLGDSPSVWWVVGLAYSPDGHTLATISGDRL 353

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                    TR     + + +    + +  FS +G+    +   D  + + +
Sbjct: 354 VRFWDVTDRTRPTLRGQTLTDQTDRLESVAFSPDGRTLA-TSSDDGTVRLLT 404


>gi|256389940|ref|YP_003111504.1| fibronectin type III domain-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256356166|gb|ACU69663.1| fibronectin type III domain-containing protein [Catenulispora
           acidiphila DSM 44928]
          Length = 678

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 97/289 (33%), Gaps = 49/289 (16%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPR-----FSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              + DG++ R +T S   +    R     +SP+  +   A          Y +      
Sbjct: 58  TTANADGSDRRVVTLSGAGLPAGARVVSVKYSPDGSE---AVVSIGSFDGAYWLVDASGH 114

Query: 249 APKRIGNFRSMILAPRFSSNGKRAL----ISVQKDEAM------DIYSVDLQSNATERLT 298
             +R+ +    +    +S++G R      ++VQ   A        +  + +       + 
Sbjct: 115 VIRRLPDAVGGLDGFAWSADGSRLYSSSPLAVQDPGATLPTPPSRVVVLGVAGTQWAEVP 174

Query: 299 NTLF--INISASYSPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                  +  A+ +PD  ++VF      S       LY +       +++S        D
Sbjct: 175 GQPAGCDDGEATAAPDG-RVVFVAKCPTSASSQSTSLYELDPGAGAARQLSVGG----VD 229

Query: 352 PVWSPQGDLI-AFTKFSGEKFAIGVMKKDGSQ---ERLLVE----DSNLQAPTWSPSGRS 403
           P +SP G  +      +  +  + VM    SQ    R++ +    + N     WSP G  
Sbjct: 230 PQFSPDGSRLSVVVTGASGRMGLAVMALPASQVLVPRVIADAGVLEGNDDVTAWSPDGAQ 289

Query: 404 LIFSRKKDGDTGSKLYSI----------DLNGRNETLINTPAYASDPQW 442
           L+    +        YSI          D    +ET++ +    S P W
Sbjct: 290 LLVRAAEPASGSDYRYSIQVVDARVGGADRTVASETVMPSAGLFS-PTW 337



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 26/207 (12%)

Query: 260 ILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +++ ++S +G  A++S+   D A  +  VD   +   RL + +      ++S D S++  
Sbjct: 83  VVSVKYSPDGSEAVVSIGSFDGAYWL--VDASGHVIRRLPDAVGGLDGFAWSADGSRLYS 140

Query: 319 ES-----DREGK-----EQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAF---- 363
            S     D          ++ V+   G+    +          +   +P G ++      
Sbjct: 141 SSPLAVQDPGATLPTPPSRVVVLGVAGTQWAEVPGQPAGCDDGEATAAPDGRVVFVAKCP 200

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL-IFSRKKDGDTGSKLYSID 422
           T  S +  ++  +       R L        P +SP G  L +      G  G  + ++ 
Sbjct: 201 TSASSQSTSLYELDPGAGAARQLSVGGVD--PQFSPDGSRLSVVVTGASGRMGLAVMALP 258

Query: 423 LNGRNETLINTPAYASDP-----QWVG 444
            +      +   A   +       W  
Sbjct: 259 ASQVLVPRVIADAGVLEGNDDVTAWSP 285


>gi|169830911|ref|YP_001716893.1| WD40 domain-containing protein [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169637755|gb|ACA59261.1| WD40 domain protein beta Propeller [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 570

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 85/278 (30%), Gaps = 75/278 (26%)

Query: 218 RFSPNQQKVAYATYDDEDIL-----------------RVYLMDTRIDRAPKRIGNFRSMI 260
            +SP+ + VA      E  +                 RVY      DR    +G    + 
Sbjct: 156 AWSPDGKWVALERQKIEPGVPGYAGIWKVDATSGAVKRVYTSRLHFDRESGVVGEVPRLA 215

Query: 261 LAPRFSSNGKRALI-------SVQKDEAMDIYSVDLQSNATER----------------- 296
               +S +G++ L        S++ D     Y+V+       R                 
Sbjct: 216 G---WSPDGEQILFWLGPLSASLEADGLP-FYTVNAAGGEAVRCADVLVGERGLEPVNDV 271

Query: 297 -LTNTLFINISASYSP-----DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            L        S  ++         +  + + R G     ++    +    +S + +A   
Sbjct: 272 ILVRPGSFITSHHFNQMAVIVGGGRETWTNKRLG-----ILYLQTNKLGFVSPESQA-VV 325

Query: 351 DPVWSPQGDLIAF---------------TKFSGEKFAIGVMKKDGSQERLLVED--SNLQ 393
           D  +SP   L+ +                + +     +  +  DG + R L  D     +
Sbjct: 326 DAAFSPNSKLLVYSAGPVLEDAGGDEAAVRRALAGRKLWAVGTDGGKPRRLTNDPAYRDE 385

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            P ++  G+ ++F R    D  S L+ +  +G     +
Sbjct: 386 WPLFTTDGQQILFVRLDAEDRAS-LWLVRPDGSGLERV 422



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 45/161 (27%), Gaps = 27/161 (16%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P +S   +  L         D++ V +       +   +      ++SP +    F +  
Sbjct: 76  PTWSPTSRWLLF----RRGEDLWLVGVGRGEARCMAQGV---DEFAWSPATDVFAFTA-- 126

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMK 377
            G E      +    +  +  +         WSP G  +A  +            I  + 
Sbjct: 127 -GGELCAGEPAKDGLRTLVKWEPGVDIGRIAWSPDGKWVALERQKIEPGVPGYAGIWKVD 185

Query: 378 KDGSQERLLVEDSNL---------QAPT---WSPSGRSLIF 406
                 + +               + P    WSP G  ++F
Sbjct: 186 ATSGAVKRVYTSRLHFDRESGVVGEVPRLAGWSPDGEQILF 226



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 19/157 (12%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++  DL      +L     I+   ++SP S  ++F   R G++ L+++     + + ++
Sbjct: 53  KLWVKDLPDGKARQLAAGEDISR-PTWSPTSRWLLF---RRGED-LWLVGVGRGEARCMA 107

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSP 399
           Q  +    +  WSP  D+ AFT  +G +   G   KDG   R LV+     ++    WSP
Sbjct: 108 QGVD----EFAWSPATDVFAFT--AGGELCAGEPAKDG--LRTLVKWEPGVDIGRIAWSP 159

Query: 400 SGRSLIFSRKK---DGDTGSKLYSIDLNGRNETLINT 433
            G+ +   R+K        + ++ +D        + T
Sbjct: 160 DGKWVALERQKIEPGVPGYAGIWKVDATSGAVKRVYT 196



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 61/334 (18%), Positives = 102/334 (30%), Gaps = 95/334 (28%)

Query: 193 LCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--------------------- 230
           L V D  DG   R L    D  +  P +SP  + + +                       
Sbjct: 54  LWVKDLPDGK-ARQLAAGED--ISRPTWSPTSRWLLFRRGEDLWLVGVGRGEARCMAQGV 110

Query: 231 --YDDEDILRVYLMDTRI---------DRAPKRIGNFRSMILA-PRFSSNGKRALISVQK 278
             +       V+               D     +     + +    +S +GK   +  QK
Sbjct: 111 DEFAWSPATDVFAFTAGGELCAGEPAKDGLRTLVKWEPGVDIGRIAWSPDGKWVALERQK 170

Query: 279 -----DEAMDIYSVDLQSNATERL-TNTLFINIS----------ASYSPDSSQIVF---- 318
                     I+ VD  S A +R+ T+ L  +            A +SPD  QI+F    
Sbjct: 171 IEPGVPGYAGIWKVDATSGAVKRVYTSRLHFDRESGVVGEVPRLAGWSPDGEQILFWLGP 230

Query: 319 ---ESDREGKEQLYVMQSNGSDQKR-----ISQDKEASYFDPVWSPQGDLIAFTKFS--- 367
                + +G    Y + + G +  R     + +       D +    G  I    F+   
Sbjct: 231 LSASLEADGLP-FYTVNAAGGEAVRCADVLVGERGLEPVNDVILVRPGSFITSHHFNQMA 289

Query: 368 ---GEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFSR-----KKD 411
              G        K+ G    L        +P         +SP+ + L++S         
Sbjct: 290 VIVGGGRETWTNKRLG-ILYLQTNKLGFVSPESQAVVDAAFSPNSKLLVYSAGPVLEDAG 348

Query: 412 GD--------TGSKLYSIDLN-GRNETLINTPAY 436
           GD         G KL+++  + G+   L N PAY
Sbjct: 349 GDEAAVRRALAGRKLWAVGTDGGKPRRLTNDPAY 382



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 47/100 (47%), Gaps = 16/100 (16%)

Query: 305 ISASYSPDSSQIVFES-----DREG----------KEQLYVMQSNGSDQKRISQDKEASY 349
           + A++SP+S  +V+ +     D  G            +L+ + ++G   +R++ D     
Sbjct: 325 VDAAFSPNSKLLVYSAGPVLEDAGGDEAAVRRALAGRKLWAVGTDGGKPRRLTNDPAYRD 384

Query: 350 FDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVE 388
             P+++  G  I F +   E + ++ +++ DGS    +VE
Sbjct: 385 EWPLFTTDGQQILFVRLDAEDRASLWLVRPDGSGLERVVE 424



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 8/76 (10%)

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            + V      + R L    ++  PTWSP+ R L+F        G  L+ + + GR E   
Sbjct: 53  KLWVKDLPDGKARQLAAGEDISRPTWSPTSRWLLF------RRGEDLWLVGV-GRGEARC 105

Query: 432 NTPAYASDPQWVGFMD 447
                  +  W    D
Sbjct: 106 MAQG-VDEFAWSPATD 120



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 3/100 (3%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L  +  DG   R LT         P F+ + Q++ +   D ED   ++L+        
Sbjct: 361 RKLWAVGTDGGKPRRLTNDPAYRDEWPLFTTDGQQILFVRLDAEDRASLWLVRPDGSGLE 420

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           + +     +     F   G    ++  +  A      D  
Sbjct: 421 RVVEEIGPLTEEFAF---GYYGAVAWDELFAYWPGVADAA 457


>gi|117924198|ref|YP_864815.1| WD-40 repeat-containing protein [Magnetococcus sp. MC-1]
 gi|117607954|gb|ABK43409.1| WD-40 repeat-containing protein [Magnetococcus sp. MC-1]
          Length = 591

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 72/209 (34%), Gaps = 25/209 (11%)

Query: 210 RDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            D  LF    SPN Q VA   +  +  +  + +Y+M     +  +RI +  + I    F+
Sbjct: 97  GDGKLFAGAISPNGQWVAVGGWTGWSWDKSISIYIMAVADGKMVRRISDLPAQINHLAFN 156

Query: 267 SNGKRALISVQKDEAMDIYSVD---LQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +G    +++ +++   IY      L             I    +++PD   +    D  
Sbjct: 157 KDGSLLAVALGENQGFRIYRAQDGVLVGGDRR----FEGICNRIAFTPDDGVVATAYD-- 210

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           GK +LY         K ++       +   +SP G  +A            +    G   
Sbjct: 211 GKVRLYSSYIQ--PIKEVTPIPGGQPYGLRFSPDGRYLAVAYRD----RAAIQVLSGRDL 264

Query: 384 RLLV-------EDSNLQAPTWSPSGRSLI 405
            L         +  ++   TWS  GR L 
Sbjct: 265 TLKYLPDMGDIQKGSMHLVTWSRDGRYLY 293



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 67/201 (33%), Gaps = 20/201 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYL---MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS- 275
           S + Q   + T  D+   R++       ++ R P         + A   S NG+   +  
Sbjct: 60  SEDGQ--FFLTAADDKTARLWNSAGQLLKVYRPPIHFVEGDGKLFAGAISPNGQWVAVGG 117

Query: 276 ---VQKDEAMDIYSVDL-QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                 D+++ IY + +       R+++        +++ D S +          ++Y  
Sbjct: 118 WTGWSWDKSISIYIMAVADGKMVRRISDLPAQINHLAFNKDGSLLAVALGENQGFRIYRA 177

Query: 332 QSN---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Q     G D++      E       ++P   ++A       K  +        +E   + 
Sbjct: 178 QDGVLVGGDRR-----FEGICNRIAFTPDDGVVA--TAYDGKVRLYSSYIQPIKEVTPIP 230

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
                   +SP GR L  + +
Sbjct: 231 GGQPYGLRFSPDGRYLAVAYR 251


>gi|323960224|gb|EGB55866.1| hypothetical protein ERGG_03282 [Escherichia coli H489]
          Length = 389

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 80/200 (40%), Gaps = 30/200 (15%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDRE 323
           F+++GK+ + + + D   + Y +DL +   ++LT     N    + SPD + + +  +  
Sbjct: 43  FTNDGKKLIFAAEFDCNRNYYLMDLVTQTAKQLTEGAGDNTFGGFLSPDDNYLFYVKNE- 101

Query: 324 GKEQLYVMQSNGSDQKRIS-----QDKEASYFD--------------PVWSPQGDLIAFT 364
             + L  +     ++  I           ++                  W+P  D   F 
Sbjct: 102 --KHLQRVDLTTLEEVTIYTVPDNWVGYGTWVANTDCTEIVGIEISKTDWTPLSDWKIFL 159

Query: 365 KFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGR-SLIFSRKKDGDT-GSKLY 419
           +F  +     ++  D   G+ E +L  ++ L  P + P+   ++ F  +   D   ++++
Sbjct: 160 EFYHKNPRCRLITIDLETGNAEVILDRNTWLGHPIFRPNNNDTIAFCHEGPHDLVDARMW 219

Query: 420 SIDLNGRNETLI--NTPAYA 437
            I+ +G NE  +  + P  +
Sbjct: 220 MINRDGTNERKVHEHQPGES 239



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/333 (12%), Positives = 94/333 (28%), Gaps = 49/333 (14%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG-----EKGDFNSRILFVS 181
            + L D+  +     K+                DD Y          ++ D  +      
Sbjct: 61  NYYLMDLVTQ---TAKQLTEGAGDNTFGGFLSPDDNYLFYVKNEKHLQRVDLTTLEEVTI 117

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +V    +     V + D   I  +  S+        ++P      +  +  ++     +
Sbjct: 118 YTVPDNWVGYGTWVANTDCTEIVGIEISKTD------WTPLSDWKIFLEFYHKNPRCRLI 171

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGK-RALISVQKDEA---MDIYSVDLQSNATERL 297
                    + I +  + +  P F  N         +         ++ ++       ++
Sbjct: 172 TIDLETGNAEVILDRNTWLGHPIFRPNNNDTIAFCHEGPHDLVDARMWMINRDGTNERKV 231

Query: 298 TNTLFIN--ISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRIS----------- 342
                        + PD S + + S  +G++Q Y+     +  +   +            
Sbjct: 232 HEHQPGESCTHEFWIPDGSALAYVSYMKGQQQRYIRKYNPDTDEDSLVMEMPACSHLMSN 291

Query: 343 QDKEASYFDPVWSP------------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +      D   SP                I       +K  I  + K  S  R+L  D 
Sbjct: 292 HNGILYVGDGSGSPVDVKDTCSYKIENDPWIYILSSKNKK--IHKLVKHNSSWRVLKGDR 349

Query: 391 --NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 P++SP  + +++S   +G+    +  I
Sbjct: 350 QVTHPHPSFSPDNKYVLYSCDAEGEPALYMAKI 382



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 80/245 (32%), Gaps = 38/245 (15%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGK 270
              ++  F+ + +K+ +A     D  R Y +   + +  K++           F S +  
Sbjct: 36  NYFYQKCFTNDGKKLIFAAEF--DCNRNYYLMDLVTQTAKQLTEGAGDNTFGGFLSPDDN 93

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL-------------------TNTLFINISAS-YS 310
                        +  VDL +     +                   T  + I IS + ++
Sbjct: 94  YLFYVKN---EKHLQRVDLTTLEEVTIYTVPDNWVGYGTWVANTDCTEIVGIEISKTDWT 150

Query: 311 PDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKFS 367
           P S   +F        +  L  +     + + I  D+      P++ P   D IAF    
Sbjct: 151 PLSDWKIFLEFYHKNPRCRLITIDLETGNAEVIL-DRNTWLGHPIFRPNNNDTIAFCHEG 209

Query: 368 GEKF---AIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL--Y 419
                   + ++ +DG+ ER + E     +     W P G +L +     G     +  Y
Sbjct: 210 PHDLVDARMWMINRDGTNERKVHEHQPGESCTHEFWIPDGSALAYVSYMKGQQQRYIRKY 269

Query: 420 SIDLN 424
           + D +
Sbjct: 270 NPDTD 274



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 51/154 (33%), Gaps = 25/154 (16%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++ D  +++F ++ +     Y+M       K++++    + F    SP  + + + K   
Sbjct: 43  FTNDGKKLIFAAEFDCNRNYYLMDLVTQTAKQLTEGAGDNTFGGFLSPDDNYLFYVKNEK 102

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQA---------------------PTWSPSGRSLIFS 407
               +  +     +E  +    +                          W+P     IF 
Sbjct: 103 ---HLQRVDLTTLEEVTIYTVPDNWVGYGTWVANTDCTEIVGIEISKTDWTPLSDWKIFL 159

Query: 408 RKKDGDTGSKLYSIDL-NGRNETLINTPAYASDP 440
                +   +L +IDL  G  E +++   +   P
Sbjct: 160 EFYHKNPRCRLITIDLETGNAEVILDRNTWLGHP 193


>gi|158312430|ref|YP_001504938.1| transcriptional activator domain-containing protein [Frankia sp.
            EAN1pec]
 gi|158107835|gb|ABW10032.1| transcriptional activator domain [Frankia sp. EAN1pec]
          Length = 1699

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 93/263 (35%), Gaps = 41/263 (15%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            L + DR G     +    D       +SP   +VA           V L D      P+ 
Sbjct: 1432 LRLWDRAGKTELAVLAPADHPAAV-EWSPAGDRVAAVHAGG-----VLLWDVGDPHRPRL 1485

Query: 253  IGNFRSMILA-------PRFSSNGKRALISVQKDEAMDIYSVDLQSNA---TERLTNTLF 302
            + +  +           P FS +G+R  ++ Q+   + ++  D  +       +L     
Sbjct: 1486 VADLDTAGSTGSTGQPRPAFSPDGQRLAVTDQQGHRITMF--DAATGRSVWLRQL--ETA 1541

Query: 303  INISASYSPDSSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               + ++SPDS++I   F +   G  +   + ++    +R       S     +   GDL
Sbjct: 1542 DQATLAFSPDSTKIAIGFGTIASGFVEF--LDTSDGTVRR--HLNTTSVGGVAFLRDGDL 1597

Query: 361  IAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +  T  +G++ ++ +     +        +         SP G S++    +     +++
Sbjct: 1598 VMTTSDTGDQSSVQLWDATTTASVGEPATQAHGAGILARSPDGMSVVAGSDRG---IAQV 1654

Query: 419  YSIDL----------NGRNETLI 431
            + +DL           GRN T +
Sbjct: 1655 WHVDLPEWMATACRIAGRNLTRV 1677



 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 85/261 (32%), Gaps = 26/261 (9%)

Query: 194  CVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
             V+  D A+ R L P  +  +  P   SP+  ++         +LR++    + + A   
Sbjct: 1390 RVLVWDAADGRELGPLLNGAVSAPVALSPDGARI--VGVGANGVLRLWDRAGKTELAVLA 1447

Query: 253  IGNFRSMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTLFIN 304
              +  +   A  +S  G R               D        DL +  +          
Sbjct: 1448 PADHPA---AVEWSPAGDRVAAVHAGGVLLWDVGDPHRPRLVADLDTAGST----GSTGQ 1500

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               ++SPD  ++   +D++G  ++ +  +       + Q + A      +SP    IA  
Sbjct: 1501 PRPAFSPDGQRLA-VTDQQGH-RITMFDAATGRSVWLRQLETADQATLAFSPDSTKIAIG 1558

Query: 365  -KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   F   +   DG+  R L   +++    +   G  ++ +      +  +L+    
Sbjct: 1559 FGTIASGFVEFLDTSDGTVRRHL-NTTSVGGVAFLRDGDLVMTTSDTGDQSSVQLWDATT 1617

Query: 424  N---GRNETLINTPAY-ASDP 440
                G   T  +     A  P
Sbjct: 1618 TASVGEPATQAHGAGILARSP 1638


>gi|326436428|gb|EGD81998.1| WD-40 repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 1921

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 82/295 (27%), Gaps = 35/295 (11%)

Query: 112  VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
            V     +          R+WD    +Q+                        Q       
Sbjct: 1331 VFANGTRVASSSNDATVRVWDAASGQQVC-----------------------QCNGHNGW 1367

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
                        + SG    ++ V D     +        + +++  FS + +++A A+ 
Sbjct: 1368 VICLAASADGTRIASGGNDTNVLVCDAQTGKVTATCSGHTRTVWKVEFSVDGRRIASASS 1427

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D      V + D        +      M+    FS  G R + S  +D+ + I+      
Sbjct: 1428 DT----TVRVWDAVTGHEVAQCLGHSRMVWEVAFSPCGDRLV-SASRDKTVRIWDA-HNG 1481

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                + T         + SPD +++V          + V       Q         S   
Sbjct: 1482 RQLSKCTGHKSNVNVLAMSPDGTRVV---SGGIDTTVRVWNMQTGAQMCECTGHTGSVDA 1538

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLI 405
               S  G  +    +      +  +   G Q R L    S + A   SPSG  + 
Sbjct: 1539 LAVSTDGRRVISGSYD-TTVRVWDINT-GQQLRQLDGHMSRVLAVAASPSGTRVA 1591



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 82/262 (31%), Gaps = 22/262 (8%)

Query: 113  TGRVIKEGKDR----LRVEFRLWDVKDRKQIIGKKFFSSPASWRKI-AHTISDDIYQSIT 167
            TG+V            +VEF +    D ++I      ++   W  +  H ++    Q + 
Sbjct: 1396 TGKVTATCSGHTRTVWKVEFSV----DGRRIASASSDTTVRVWDAVTGHEVA----QCLG 1447

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              +  +        + +VS     ++ + D                +     SP+  +V 
Sbjct: 1448 HSRMVWEVAFSPCGDRLVSASRDKTVRIWDAHNGRQLSKCTGHKSNVNVLAMSPDGTRVV 1507

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                D    +RV+ M T               + A   S++G+R +IS   D  + ++ +
Sbjct: 1508 SGGIDT--TVRVWNMQTGAQMCE--CTGHTGSVDALAVSTDGRR-VISGSYDTTVRVWDI 1562

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +       +L   +   ++ + SP  +++   S       L V       Q         
Sbjct: 1563 N-TGQQLRQLDGHMSRVLAVAASPSGTRVASGSQ---DTTLRVWDEASGCQVAECDRPAI 1618

Query: 348  SYFDPVWSPQGDLIAFTKFSGE 369
                   +  G  I   +  G 
Sbjct: 1619 PATAVALALDGSRIVSGRRDGR 1640



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 61/194 (31%), Gaps = 14/194 (7%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP Q+ +  A+   E +  +  +     R     G     + +  FS  G R + S   D
Sbjct: 1244 SPAQRCLWRASGCVEQLACIPPVVLPNLRRGYHGGAHERSVHSIAFSQEGARLV-SASDD 1302

Query: 280  EAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            + + ++  + Q+       L +   ++  A ++ + +++   S+      + V  +    
Sbjct: 1303 QRVCVW--NAQTGELVAECLGHEGRVSAIAVFA-NGTRVASSSN---DATVRVWDAASGQ 1356

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAP 395
            Q                S  G  IA     G    + V      +           +   
Sbjct: 1357 QVCQCNGHNGWVICLAASADGTRIA---SGGNDTNVLVCDAQTGKVTATCSGHTRTVWKV 1413

Query: 396  TWSPSGRSLIFSRK 409
             +S  GR +  +  
Sbjct: 1414 EFSVDGRRIASASS 1427


>gi|17228438|ref|NP_484986.1| hypothetical protein alr0943 [Nostoc sp. PCC 7120]
 gi|17130289|dbj|BAB72900.1| alr0943 [Nostoc sp. PCC 7120]
          Length = 186

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 3/118 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFE 319
           P  S NG+       ++    +   DLQ  +  R   L     I  S S S     IV+ 
Sbjct: 50  PALSGNGRFLAFISNRNGVHQLLVYDLQQQSFIRTPGLNRPETITESPSLSYTGRYIVYM 109

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +  +G+  + +        + I+        +P  SP G  + F   +  ++ I V+ 
Sbjct: 110 TSDQGRPVVALYDRAIQQSQIITPTYRGWVRNPGISPDGRYVVFETAARGQWDIEVLD 167



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 4/124 (3%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSP 356
           N+ F     + S +   + F S+R G  QL V         R       E     P  S 
Sbjct: 42  NSRFAEEQPALSGNGRFLAFISNRNGVHQLLVYDLQQQSFIRTPGLNRPETITESPSLSY 101

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
            G  I +      +  + +  +   Q +++       ++ P  SP GR ++F     G  
Sbjct: 102 TGRYIVYMTSDQGRPVVALYDRAIQQSQIITPTYRGWVRNPGISPDGRYVVFETAARGQW 161

Query: 415 GSKL 418
             ++
Sbjct: 162 DIEV 165



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 44/119 (36%), Gaps = 2/119 (1%)

Query: 216 EPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +P  S N + +A+ +  +    L VY +  +       +    ++  +P  S  G+  + 
Sbjct: 49  QPALSGNGRFLAFISNRNGVHQLLVYDLQQQSFIRTPGLNRPETITESPSLSYTGRYIVY 108

Query: 275 SVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                    +   D     ++ +T        +   SPD   +VFE+   G+  + V+ 
Sbjct: 109 MTSDQGRPVVALYDRAIQQSQIITPTYRGWVRNPGISPDGRYVVFETAARGQWDIEVLD 167



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 29/82 (35%), Gaps = 1/82 (1%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               + I   P  S   + + Y T D    + V L D  I ++      +R  +  P  S
Sbjct: 87  LNRPETITESPSLSYTGRYIVYMTSDQGRPV-VALYDRAIQQSQIITPTYRGWVRNPGIS 145

Query: 267 SNGKRALISVQKDEAMDIYSVD 288
            +G+  +         DI  +D
Sbjct: 146 PDGRYVVFETAARGQWDIEVLD 167



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 14/93 (15%), Positives = 27/93 (29%), Gaps = 4/93 (4%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN----LQAPTWSPSGRSLIFS 407
           P  S  G  +AF         + V              +      ++P+ S +GR +++ 
Sbjct: 50  PALSGNGRFLAFISNRNGVHQLLVYDLQQQSFIRTPGLNRPETITESPSLSYTGRYIVYM 109

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
               G     LY   +            +  +P
Sbjct: 110 TSDQGRPVVALYDRAIQQSQIITPTYRGWVRNP 142


>gi|255082874|ref|XP_002504423.1| predicted protein [Micromonas sp. RCC299]
 gi|226519691|gb|ACO65681.1| predicted protein [Micromonas sp. RCC299]
          Length = 1249

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 41/103 (39%), Gaps = 4/103 (3%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   +   + D    ++  D+      R+T+     ++   S D +++ F   ++  +++
Sbjct: 24  GDVLVFVCEDD----LWRCDVAGGVATRITDAPGPVLAPLVSRDGTRVAFTVQQDACQEI 79

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           YV+ + G    +++           WS     + F   +G+ F
Sbjct: 80  YVVSTRGGPVTQVTHAGAERTRVACWSADDTRLFFASSAGQSF 122



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 55/151 (36%), Gaps = 10/151 (6%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISASYSPDSSQIVFESDRE 323
           +G+R  +        D+       +  +R        L        SP+S  I   + R 
Sbjct: 392 DGRRVAMVTDASGEDDVEIHSEDGDFRKRRLCIPPAVLGRVDEMVSSPESPLIAVVNHRA 451

Query: 324 GKEQLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGS 381
              +L ++ +     +      E     D  WSP G+ +A+T++   E+  + ++     
Sbjct: 452 ---RLLIIDAETGKVRTADFSDEAGGVGDLAWSPCGNWLAYTRYDDPERSRVRILDARSG 508

Query: 382 QERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
           + R          AP+W PSG  L F   ++
Sbjct: 509 EVRDATAPVLGDCAPSWDPSGNFLYFLSARE 539



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                RI +    +LAP  S +G R   +VQ+D   +IY V  +     ++T+       
Sbjct: 42  GGVATRITDAPGPVLAPLVSRDGTRVAFTVQQDACQEIYVVSTRGGPVTQVTHAGAERTR 101

Query: 307 -ASYSPDSSQIVFESDRE 323
            A +S D +++ F S   
Sbjct: 102 VACWSADDTRLFFASSAG 119



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 55/161 (34%), Gaps = 21/161 (13%)

Query: 299 NTLFINISA------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR---ISQDKEASY 349
           +   +           Y  D  ++   +D  G++ + +   +G  +KR   I        
Sbjct: 373 DGPALEYEPPRCRLGRYLWDGRRVAMVTDASGEDDVEIHSEDGDFRKRRLCIPPAVLGRV 432

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----TWSPSGRSL 404
            + V SP+  LIA          + ++  +  + R    D + +A       WSP G  L
Sbjct: 433 DEMVSSPESPLIAVVNHRA---RLLIIDAETGKVR--TADFSDEAGGVGDLAWSPCGNWL 487

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWVG 444
            ++R  D +  S++  +D           P      P W  
Sbjct: 488 AYTRYDDPER-SRVRILDARSGEVRDATAPVLGDCAPSWDP 527



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 6/106 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQK 278
           SP    +A   +      R+ ++D    +       +    +    +S  G     +   
Sbjct: 438 SPESPLIAVVNHRA----RLLIIDAETGKVRTADFSDEAGGVGDLAWSPCGNWLAYTRYD 493

Query: 279 D-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           D E   +  +D +S      T  +  + + S+ P  + + F S RE
Sbjct: 494 DPERSRVRILDARSGEVRDATAPVLGDCAPSWDPSGNFLYFLSARE 539



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 78/250 (31%), Gaps = 32/250 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L   D  G     +T      +  P  S +  +VA+    D     +Y++ TR     +
Sbjct: 34  DLWRCDVAGGVATRITD-APGPVLAPLVSRDGTRVAFTVQQDA-CQEIYVVSTRGGPVTQ 91

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKD----EAMDIYSVDL---QSNATERLTNTLFIN 304
                        +S++  R   +        +A +++ VD+     +  ER T+     
Sbjct: 92  VTHAGAERTRVACWSADDTRLFFASSAGQSFVDADELWCVDIGGGDDDDGERGTSRRGRI 151

Query: 305 ISAS---YSPDSSQIVFESD--------REGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           +      + P     V  S           G   L    S  +      +         +
Sbjct: 152 VEPRRCGFGPVHDACVRPSGGDSPGGDASSGAPLLVARNSEDTAAAH-WKGYRGGCGGSL 210

Query: 354 W-SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           W  P+GD        G +F    +  +G+         N+ +  W+  GR  I     DG
Sbjct: 211 WLDPRGD--------GRRFVRLDVSLEGAGVSDGASGVNVGSVAWAVDGR--ITLVGDDG 260

Query: 413 DTGSKLYSID 422
              S LYS D
Sbjct: 261 GGRSNLYSFD 270



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 1/62 (1%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP    +AY  YDD +  RV ++D R                AP +  +G        
Sbjct: 479 AWSPCGNWLAYTRYDDPERSRVRILDARSGEVRDATAPVLGDC-APSWDPSGNFLYFLSA 537

Query: 278 KD 279
           ++
Sbjct: 538 RE 539



 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 30/97 (30%), Gaps = 9/97 (9%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSG 401
              +  Y  P     GD++ F         +      G     + +    + AP  S  G
Sbjct: 11  PSPQGYYRWPAL--HGDVLVFVCEDD----LWRCDVAGGVATRITDAPGPVLAPLVSRDG 64

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             + F+ ++  D   ++Y +   G   T +       
Sbjct: 65  TRVAFTVQQ--DACQEIYVVSTRGGPVTQVTHAGAER 99


>gi|159900551|ref|YP_001546798.1| hypothetical protein Haur_4038 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159893590|gb|ABX06670.1| conserved hypothetical protein [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 596

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 85/278 (30%), Gaps = 32/278 (11%)

Query: 194 CVMDRDGANIRYLTPSR------DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  DG  +  +          D  L +   SP+  K         D+ R         
Sbjct: 235 FTVQLDGGRLNVVIADSATATLGDDPLAKSNGSPSAPKQPVVFASKGDLYR------YES 288

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD----IYSVDLQSNATERLTNTLFI 303
                I    ++  A   S +  +        + +     +++  +  +    L   +  
Sbjct: 289 SRVVPITTTLAIESAVAISPDRTQIAFCRANPDGLPTQGALWTSTIDGDNET-LVADVGG 347

Query: 304 NISASYSPDSSQIVFE---SDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               ++S D   I F    SD      +L+ +++NG D   +S   E S   P   P G 
Sbjct: 348 CAEPAWSLDGGIIWFTAPWSDAAPDSYRLWQVKANGGDASAVSPLDEWSRRMPHALPDGS 407

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-----WSPSGRSLIFSRKKDGDT 414
           ++      G +  + +       + LL + S     +      S  G  +     +  D 
Sbjct: 408 VLTVGHTDGGQGGLLISNPLSGTDGLLGQASLGNYRSVGQAQVSADGTRIAVEALRA-DG 466

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWV-----GFMD 447
           G+ L  +D  G+    I    +     W       +++
Sbjct: 467 GADLLVLDQTGKQLDAITDQWWVRPLSWSSDNKLYYLN 504



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 77/229 (33%), Gaps = 22/229 (9%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I F +    +      L  +  +G +   ++P  +     P   P+   +     D    
Sbjct: 360 IWFTAPWSDAAPDSYRLWQVKANGGDASAVSPLDEWSRRMPHALPDGSVLTVGHTDGGQG 419

Query: 237 ---LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSN 292
              +   L  T        +GN+RS+  A + S++G R  + +++ D   D+  +D    
Sbjct: 420 GLLISNPLSGTDGLLGQASLGNYRSVGQA-QVSADGTRIAVEALRADGGADLLVLDQTGK 478

Query: 293 ATERLTNTLFINISASYSPDSSQIVF-ESDREGKE-QLYVMQSNGSDQKRISQDKEASYF 350
             + +T+  ++    S+S D+       + R G+     +    GS+  +I +       
Sbjct: 479 QLDAITDQWWV-RPLSWSSDNKLYYLNVACRSGQVLNYSLHSRQGSNDSQIIKGATLGDL 537

Query: 351 DPVW-------------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             V              SP  +  A    SG    + +     +    L
Sbjct: 538 GSVAVVDDALLYVRALQSPDNERGAEPMISGPS-ELWLYDLSNTARTRL 585


>gi|313679050|ref|YP_004056789.1| peptidase s9 prolyl oligopeptidase active site domain protein
           [Oceanithermus profundus DSM 14977]
 gi|313151765|gb|ADR35616.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Oceanithermus profundus DSM 14977]
          Length = 603

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 13/138 (9%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +PD   + F +  EG + L+V       ++R++ D+        W P G L+ + +  G 
Sbjct: 23  APDGRSVAFIAPWEGVKNLWVQDLATGARRRVTADRGRGIVAYGWLPSG-LLVYMQDEGG 81

Query: 370 --KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              + +     +G   RLL     +Q       P + P    L+    +D      ++ +
Sbjct: 82  DENWRLYAQDPEGGAPRLLTPGEGVQARILKAHPDF-PD-ELLVLLNDRD-PALHDVWRV 138

Query: 422 DL-NGRNETLINTPAYAS 438
           +   G    ++  P Y  
Sbjct: 139 NARTGERVRVLENPGYVG 156



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 10/138 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
            + +G+        +   +++  DL + A  R+T      I A  + P    +V+  D  
Sbjct: 22  VAPDGRSVAFIAPWEGVKNLWVQDLATGARRRVTADRGRGIVAYGWLPSG-LLVYMQDEG 80

Query: 324 G--KEQLYVMQSNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           G    +LY     G   + ++  +          P + P   L+           +  + 
Sbjct: 81  GDENWRLYAQDPEGGAPRLLTPGEGVQARILKAHPDF-PDELLVLLNDRDPALHDVWRVN 139

Query: 378 K-DGSQERLLVEDSNLQA 394
              G + R+L     +  
Sbjct: 140 ARTGERVRVLENPGYVGF 157


>gi|289669243|ref|ZP_06490318.1| TolB-like protein [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 293

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 68/214 (31%), Gaps = 25/214 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEA---MDIYSVDLQSNA---TERLTNTLFIN-I 305
           + +  +       S +G+R + +  +       D++   L+         L      +  
Sbjct: 33  VVSTPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQDARPLPINTAQDET 92

Query: 306 SASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSP 356
           +  +S D   ++F S R    G   LY    +       +Q      +   +   P  S 
Sbjct: 93  TPLFSADGRWLLFASTRPAGAGGSDLYRAPVDAQGAVGAAQSLGTAINSAGNERAPTLSL 152

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT------WSPSGRSLIFS 407
            G  + F            + V + DG          ++ +        W   GR+L+++
Sbjct: 153 DGTRLLFASDGHGGAGGMDLFVARWDGKAFSAPAALVDINSAADELDAAWLGDGRALVWA 212

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R K       L ++  +G     +  P   + PQ
Sbjct: 213 RGKTDGPSQLLLAVCKDGHFAQGVPLPLSFNGPQ 246



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 60/170 (35%), Gaps = 24/170 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGS---DQKRISQDKEASYFDP 352
           +T      A+ SPD  +IV+ SDR    G   L+  Q  G    D + +  +       P
Sbjct: 35  STPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQDARPLPINTAQDETTP 94

Query: 353 VWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQE--------RLLVEDSNLQAPTWSPSG 401
           ++S  G  + F            +     D              +    N +APT S  G
Sbjct: 95  LFSADGRWLLFASTRPAGAGGSDLYRAPVDAQGAVGAAQSLGTAINSAGNERAPTLSLDG 154

Query: 402 RSLIFSRK-KDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
             L+F+     G  G  L+    +G+  +       IN+ A   D  W+G
Sbjct: 155 TRLLFASDGHGGAGGMDLFVARWDGKAFSAPAALVDINSAADELDAAWLG 204



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 22/168 (13%)

Query: 220 SPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ Q++ +A+         D+ +  L   R   A     N       P FS++G+  L 
Sbjct: 46  SPDGQRIVWASDRAGGAGGWDLWQAQLRGGRWQDARPLPINTAQDETTPLFSADGRWLLF 105

Query: 275 SVQKD---EAMDIYSVDLQS----NATERL---TNTLFINISASYSPDSSQIVFESD--- 321
           +  +       D+Y   + +     A + L    N+     + + S D ++++F SD   
Sbjct: 106 ASTRPAGAGGSDLYRAPVDAQGAVGAAQSLGTAINSAGNERAPTLSLDGTRLLFASDGHG 165

Query: 322 REGKEQLYVMQSNG----SDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             G   L+V + +G    +    +  +  A   D  W   G  + + +
Sbjct: 166 GAGGMDLFVARWDGKAFSAPAALVDINSAADELDAAWLGDGRALVWAR 213



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 50/165 (30%), Gaps = 19/165 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---- 233
           +     G     L      G    + R L  +  Q    P FS + + + +A+       
Sbjct: 55  ASDRAGGAGGWDLWQAQLRGGRWQDARPLPINTAQDETTPLFSADGRWLLFASTRPAGAG 114

Query: 234 -EDILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEAM---DIYS 286
             D+ R  +       A + +G   N      AP  S +G R L +          D++ 
Sbjct: 115 GSDLYRAPVDAQGAVGAAQSLGTAINSAGNERAPTLSLDGTRLLFASDGHGGAGGMDLFV 174

Query: 287 VDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREGKE 326
                 A          N+    + A++  D   +V+   +    
Sbjct: 175 ARWDGKAFSAPAALVDINSAADELDAAWLGDGRALVWARGKTDGP 219


>gi|170103144|ref|XP_001882787.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642158|gb|EDR06415.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 816

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 83/246 (33%), Gaps = 20/246 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   N + V D        +       +    FS +  ++   + D+     V + D  
Sbjct: 214 SGSSDNFVRVWDASTGAELKVLEGHTDTVCSVAFSNDGTRIVSGSSDN----SVRVWDVL 269

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +      +L+  FS +G    IS   D ++ ++   +       L   +    
Sbjct: 270 TGAELNMLNGHMKNVLSVAFSIDGTHI-ISGSSDNSVWVWDA-VTGAELNVLNGHIKPVW 327

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++S D +++V  S+      ++V ++    + ++ +          +S  G  I    
Sbjct: 328 SVAFSTDGTRLVSGSE---DTSVWVWEALTWAKLKVLKGHTEIVSSVAFSTDGTRIVSGS 384

Query: 366 FSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +      + V            +  +   + +  +S  G  ++      G + + ++  D
Sbjct: 385 YDNS---VRVWDTSTGAALNVLIAGQTRPVWSVAFSTDGTRIV-----SGSSDNSVWLWD 436

Query: 423 LNGRNE 428
           ++  +E
Sbjct: 437 VSTGSE 442



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 76/223 (34%), Gaps = 15/223 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +VSG   NS+ V D        +     + +    FS +   +   + D+     V++ 
Sbjct: 253 RIVSGSSDNSVRVWDVLTGAELNMLNGHMKNVLSVAFSIDGTHIISGSSDN----SVWVW 308

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D         +      + +  FS++G R + S  +D ++ ++   L     + L     
Sbjct: 309 DAVTGAELNVLNGHIKPVWSVAFSTDGTRLV-SGSEDTSVWVWEA-LTWAKLKVLKGHTE 366

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQGDLI 361
           I  S ++S D ++IV  S       + V  ++      +    +    +   +S  G  I
Sbjct: 367 IVSSVAFSTDGTRIVSGSY---DNSVRVWDTSTGAALNVLIAGQTRPVWSVAFSTDGTRI 423

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGR 402
                      + +       E  + E    ++ +  +S  G 
Sbjct: 424 VSGSSDNS---VWLWDVSTGSELKMFEGHMGHVLSVAFSSDGT 463



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 85/259 (32%), Gaps = 33/259 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   NS+ V D        +     + ++   FS +  ++   + D      V++ +  
Sbjct: 298 SGSSDNSVWVWDAVTGAELNVLNGHIKPVWSVAFSTDGTRLVSGSEDT----SVWVWEAL 353

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                K +     ++ +  FS++G R + S   D ++ ++  D  + A   L   +    
Sbjct: 354 TWAKLKVLKGHTEIVSSVAFSTDGTRIV-SGSYDNSVRVW--DTSTGAA--LNVLIAGQT 408

Query: 306 SASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              +    S D ++IV  S       +++   +   + ++ +          +S  G   
Sbjct: 409 RPVWSVAFSTDGTRIVSGSS---DNSVWLWDVSTGSELKMFEGHMGHVLSVAFSSDGT-- 463

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                      +      G  + L      + +  +S  G  +I       D   +++ +
Sbjct: 464 -----------LWDASTWGELDMLDGHTEIVSSVAFSNDGTCII---SGSSDNSVRVWDV 509

Query: 422 DLNGRNETLINTPAYASDP 440
              G    +++       P
Sbjct: 510 S-TGAELKVLHGHMETVWP 527



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 90/276 (32%), Gaps = 38/276 (13%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPAS-WR--KIAHTISD---------DIYQSITGEK---- 170
             R+WDV    ++  K       + W      H ISD          ++Q +TG +    
Sbjct: 503 SVRVWDVSTGAEL--KVLHGHMETVWPIVDGIHIISDHSSDNCEPVRVWQELTGAELKVH 560

Query: 171 ----GDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
               G   S + F  +   ++S    NS+ V D        +      ++    FS +  
Sbjct: 561 EDHTGIVRSTVAFSPDGTRIISSSFGNSVRVWDALSWAELNVLRGHTAMVSSVAFSNDGT 620

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +   + D      V + D         +   +  + +  FS +G R + S   D+++ +
Sbjct: 621 CIVSGSEDH----SVRVWDVLAGAELNVLVGHKGKVWSVAFSPDGSRIV-SGSSDKSVRL 675

Query: 285 YSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +  D  +    + +        S ++S D + IV  S       + V  ++   + ++  
Sbjct: 676 W--DASTGAKLKVIKGHTNTVCSVAFSNDGTHIVSGSK---DNSVRVWDASTGAELKVLS 730

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               +     +S     I          ++ V    
Sbjct: 731 GHTKTVLSVAFSAYDTHII---SGSSDHSVRVWDAS 763



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 48/323 (14%), Positives = 96/323 (29%), Gaps = 88/323 (27%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +VSG   NS+ V D   GA +  L   + + ++   FS +  ++   + D+     V+L
Sbjct: 379 RIVSGSYDNSVRVWDTSTGAALNVLIAGQTRPVWSVAFSTDGTRIVSGSSDN----SVWL 434

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGK---------------------RALIS----- 275
            D       K        +L+  FSS+G                          S     
Sbjct: 435 WDVSTGSELKMFEGHMGHVLSVAFSSDGTLWDASTWGELDMLDGHTEIVSSVAFSNDGTC 494

Query: 276 -VQKDEAMDIYSVDLQSNATER------------------LTNTLFINISA--------- 307
            +       +   D+ + A  +                  +++    N            
Sbjct: 495 IISGSSDNSVRVWDVSTGAELKVLHGHMETVWPIVDGIHIISDHSSDNCEPVRVWQELTG 554

Query: 308 -----------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                            ++SPD ++I+  S       + V  +    +  + +   A   
Sbjct: 555 AELKVHEDHTGIVRSTVAFSPDGTRIISSSF---GNSVRVWDALSWAELNVLRGHTAMVS 611

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
              +S  G  I       E  ++ V     G++  +LV     + +  +SP G  ++   
Sbjct: 612 SVAFSNDGTCIV---SGSEDHSVRVWDVLAGAELNVLVGHKGKVWSVAFSPDGSRIV--- 665

Query: 409 KKDGDTGSKLYSIDLNGRNETLI 431
               D   +L+     G    +I
Sbjct: 666 SGSSDKSVRLWDAS-TGAKLKVI 687



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 88/272 (32%), Gaps = 40/272 (14%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             K  ++         +VSG    S+ V +        +     +I+    FS +  ++ 
Sbjct: 322 HIKPVWSVAFSTDGTRLVSGSEDTSVWVWEALTWAKLKVLKGHTEIVSSVAFSTDGTRIV 381

Query: 228 YATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             +YD+     V + DT    A    I      + +  FS++G R + S   D ++ ++ 
Sbjct: 382 SGSYDN----SVRVWDTSTGAALNVLIAGQTRPVWSVAFSTDGTRIV-SGSSDNSVWLWD 436

Query: 287 VDLQSNATERLTNTLFINISASYSPDS---------------------SQIVFESD---- 321
           V    +  +     +   +S ++S D                      S + F +D    
Sbjct: 437 VS-TGSELKMFEGHMGHVLSVAFSSDGTLWDASTWGELDMLDGHTEIVSSVAFSNDGTCI 495

Query: 322 --REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                   + V   +   + ++      + +  V    G  I     S     + V ++ 
Sbjct: 496 ISGSSDNSVRVWDVSTGAELKVLHGHMETVWPIV---DGIHIISDHSSDNCEPVRVWQEL 552

Query: 380 GSQERLLVEDSNLQAPT---WSPSGRSLIFSR 408
              E  + ED      +   +SP G  +I S 
Sbjct: 553 TGAELKVHEDHTGIVRSTVAFSPDGTRIISSS 584



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 96/286 (33%), Gaps = 22/286 (7%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD-------FNSRILFVSE 182
           LWDV    ++  K F         +A +    ++ + T  + D         S + F ++
Sbjct: 434 LWDVSTGSEL--KMFEGHMGHVLSVAFSSDGTLWDASTWGELDMLDGHTEIVSSVAFSND 491

Query: 183 SV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
               +SG   NS+ V D        +     + ++      +   +  + +  ++   V 
Sbjct: 492 GTCIISGSSDNSVRVWDVSTGAELKVLHGHMETVWPIV---DGIHII-SDHSSDNCEPVR 547

Query: 241 LMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +         K   +   ++ +   FS +G R  IS     ++ ++   L       L  
Sbjct: 548 VWQELTGAELKVHEDHTGIVRSTVAFSPDGTRI-ISSSFGNSVRVWDA-LSWAELNVLRG 605

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              +  S ++S D + IV  S+      + V       +  +    +   +   +SP G 
Sbjct: 606 HTAMVSSVAFSNDGTCIVSGSE---DHSVRVWDVLAGAELNVLVGHKGKVWSVAFSPDGS 662

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            I  +  S +   +         + +    + + +  +S  G  ++
Sbjct: 663 RIV-SGSSDKSVRLWDASTGAKLKVIKGHTNTVCSVAFSNDGTHIV 707


>gi|116622428|ref|YP_824584.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225590|gb|ABJ84299.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 845

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 73/185 (39%), Gaps = 10/185 (5%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--FINISASYSPD 312
               + L+PR S +G    +    D    +  +  ++ +   LT++    +    S+S D
Sbjct: 322 GGPEIALSPRLSPDGHVLAMLAMVDGNTQVAVMKPETGSWNVLTHSRDQGMVTHLSWSQD 381

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF- 371
            + I +    +  + ++ +   G ++  + +    +  +P     G  +  ++ +G+   
Sbjct: 382 GASIYYSRLTDVPQGVFSVPFLGGEEHLVLE----NAANPAVLQDGT-VVLSRLNGQNHP 436

Query: 372 AIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNET 429
            +     +  + + L V+  +++    S  GR  + +    G  G S L  +DL      
Sbjct: 437 QLFRFWPETGKLQELPVQPDDMRDHQVSRDGRHAVVTGAIYGKAGKSSLIEVDLLRATAR 496

Query: 430 LINTP 434
           +I TP
Sbjct: 497 VIPTP 501



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 55/155 (35%), Gaps = 10/155 (6%)

Query: 291 SNATERLTN----TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                + T        I +S   SPD   +   +  +G  Q+ VM+        ++  ++
Sbjct: 310 GTPATQWTAVELGGPEIALSPRLSPDGHVLAMLAMVDGNTQVAVMKPETGSWNVLTHSRD 369

Query: 347 ASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                   WS  G  I +++ +     +  +   G +E L++E  N   P     G  ++
Sbjct: 370 QGMVTHLSWSQDGASIYYSRLTDVPQGVFSVPFLGGEEHLVLE--NAANPAVLQDGTVVL 427

Query: 406 FSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASD 439
              + +G    +L+      G+ + L   P    D
Sbjct: 428 --SRLNGQNHPQLFRFWPETGKLQELPVQPDDMRD 460



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 69/224 (30%), Gaps = 13/224 (5%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              +I   PR SP+   +A     D +     +               + M+    +S +
Sbjct: 322 GGPEIALSPRLSPDGHVLAMLAMVDGNTQVAVMKPETGSWNVLTHSRDQGMVTHLSWSQD 381

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G     S   D    ++SV         +          +   D + ++   + +   QL
Sbjct: 382 GASIYYSRLTDVPQGVFSVPFLGGEEHLVLENAAN---PAVLQDGTVVLSRLNGQNHPQL 438

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---FSGEKFAIGVMKKDGSQERL 385
           +         + +   +     D   S  G     T        K ++  +    +  R+
Sbjct: 439 FRFWPETGKLQEL-PVQPDDMRDHQVSRDGRHAVVTGAIYGKAGKSSLIEVDLLRATARV 497

Query: 386 LVEDSNLQ----APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +               SP GRS++ S + +  T S++  + L+G
Sbjct: 498 IPTPELDWLTFAGMALSPDGRSVLMSARSN--TLSRVIRVPLDG 539



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 18/190 (9%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            ++A+     E    + + +T   R   RI   + MI +   S +G              
Sbjct: 649 DRIAFL-IGPEPHDTIAIANTSNGRIGMRIAPGKGMIESLAASPDGGTLYF----GAGGS 703

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           I+SV        R+    ++  +         IV       + +L+ + + G  ++ I  
Sbjct: 704 IWSVASSGGEGRRICPGSWVVTAPW----GGLIV-ARTEIAQIRLFELPAGGGPERAIPV 758

Query: 344 DKEASYFDPVWSP-----QGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVEDS--NLQAP 395
           ++ +       +P        ++     +   F  + ++  D  +   +  D   +L + 
Sbjct: 759 NRTSPLLSLFITPGTIRADRRMLVSLNVADSWFNPLALLDLDSGKVTRIAGDGVSDLHSG 818

Query: 396 TWSPSGRSLI 405
            WS  GR L 
Sbjct: 819 AWSRDGRILA 828



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 95/282 (33%), Gaps = 24/282 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATY 231
           + R   V+ ++     K+SL  +D   A  R +       L       SP+ + V   + 
Sbjct: 466 DGRHAVVTGAIYGKAGKSSLIEVDLLRATARVIPTPELDWLTFAGMALSPDGRSVL-MSA 524

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
               + RV  +       P+ +    S I     +++G   +++   D   ++ S     
Sbjct: 525 RSNTLSRVIRVPLDGGARPQDLFRVTSTIWGLDAAADGS--VLANLVDRPTELVSFPATG 582

Query: 292 NATERLTNTLFINISASYS-----PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
               ++        +  +      PD  + V   +  G  +L +  + G     + Q  E
Sbjct: 583 GPAVKI---AGFRETPEWDMVVALPDG-RAVTPVEVAGLTRL-IAVAPGKTPSPLIQTPE 637

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRSL 404
           A+   PV +   D IAF         I +          R+      +++   SP G +L
Sbjct: 638 AT-TSPVTAVGADRIAFLIGPEPHDTIAIANTSNGRIGMRIAPGKGMIESLAASPDGGTL 696

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            F        G  ++S+  +G     I   ++     W G +
Sbjct: 697 YF------GAGGSIWSVASSGGEGRRICPGSWVVTAPWGGLI 732



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/265 (15%), Positives = 79/265 (29%), Gaps = 29/265 (10%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYATYD--DEDILRVYLMDTRID 247
             + VM  +  +   LT SRDQ ++    +S +   + Y+      + +  V  +     
Sbjct: 349 TQVAVMKPETGSWNVLTHSRDQGMVTHLSWSQDGASIYYSRLTDVPQGVFSVPFLGGEEH 408

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              +   N       P    +G   L  +       ++    ++   + L          
Sbjct: 409 LVLENAAN-------PAVLQDGTVVLSRLNGQNHPQLFRFWPETGKLQELPVQPDDMRDH 461

Query: 308 SYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDP-VWSPQGDLIA 362
             S D    V       + GK  L  +    +  + I + + +   F     SP G  + 
Sbjct: 462 QVSRDGRHAVVTGAIYGKAGKSSLIEVDLLRATARVIPTPELDWLTFAGMALSPDGRSVL 521

Query: 363 FTKFSGEKFAIGVMKKDGSQE-----RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            +  S     +  +  DG        R+      L A   +  G  L     +     ++
Sbjct: 522 MSARSNTLSRVIRVPLDGGARPQDLFRVTSTIWGLDA---AADGSVLANLVDRP----TE 574

Query: 418 LYSIDLNGRNETLINTPAYASDPQW 442
           L S    G     I    +   P+W
Sbjct: 575 LVSFPATGGPAVKIA--GFRETPEW 597



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 56/367 (15%), Positives = 103/367 (28%), Gaps = 47/367 (12%)

Query: 78  VFNLISQDSFKQK-ITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
           +F    +    Q+    PD +   Q     G   +VTG +  +      +E  L      
Sbjct: 438 LFRFWPETGKLQELPVQPDDMRDHQVSRD-GRHAVVTGAIYGKAGKSSLIEVDLL----- 491

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
                       A+ R I     D +  +      D  S    V  S  S  +   + V 
Sbjct: 492 -----------RATARVIPTPELDWLTFAGMALSPDGRS----VLMSARSNTLSRVIRVP 536

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
              GA  + L      I     +  +         +  D     +          +I  F
Sbjct: 537 LDGGARPQDLFRVTSTI-----WGLDAAADGSVLANLVDRPTELVSFPATGGPAVKIAGF 591

Query: 257 RSMILAPRFS-----SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R     P +       +G RA+  V+      + +V         L  T     S   + 
Sbjct: 592 RE---TPEWDMVVALPDG-RAVTPVEVAGLTRLIAV-APGKTPSPLIQTPEATTSPVTAV 646

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            + +I F    E  + + +  ++           +        SP G  + F    G   
Sbjct: 647 GADRIAFLIGPEPHDTIAIANTSNGRIGMRIAPGKGMIESLAASPDGGTLYF----GAGG 702

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +I  +   G + R +   S +    W   G  ++    +      +L+ +   G  E  I
Sbjct: 703 SIWSVASSGGEGRRICPGSWVVTAPW---GGLIV---ARTEIAQIRLFELPAGGGPERAI 756

Query: 432 NTPAYAS 438
                + 
Sbjct: 757 PVNRTSP 763


>gi|326469058|gb|EGD93067.1| WD domain-containing protein [Trichophyton tonsurans CBS 112818]
          Length = 773

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 60/191 (31%), Gaps = 13/191 (6%)

Query: 195 VMDRDGANIR--YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + D+ G  +R  +        ++   FS +  K+A  + D      V + D+       R
Sbjct: 438 LCDKSGFPLRTAFELSHHTNEVWYLEFSHDGTKLATTSRD----CTVLIYDSTTFEIIHR 493

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      +    +S +  +  I+  +D    ++ V         + +      SAS++PD
Sbjct: 494 LTEHSEPVAYATWSPDDSKL-ITCSQDFKAKLWDVP-SGTCLLTIEHHHAPITSASWAPD 551

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               V     + + QL             +   +    D   +P G  +           
Sbjct: 552 GESFV-TGSLDSQSQLCHWSVPHKSL-LYTWPGQYRVRDCAITPDGKRLIAISLQK---R 606

Query: 373 IGVMKKDGSQE 383
           I V      +E
Sbjct: 607 IYVYNFITREE 617



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/219 (11%), Positives = 73/219 (33%), Gaps = 19/219 (8%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISD-------DIYQSITGEKGDFNSRILFVSE 182
           L D   + QI    + ++  S    +  + D         ++        +         
Sbjct: 410 LLDQVKQTQINNCLYHNTAVSPSLYSDHLCDKSGFPLRTAFELSHHTNEVWYLEFSHDGT 469

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + +     ++ + D     I +      + +    +SP+  K+   + D +      L 
Sbjct: 470 KLATTSRDCTVLIYDSTTFEIIHRLTEHSEPVAYATWSPDDSKLITCSQDFK----AKLW 525

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI--YSVDLQSNATERLTNT 300
           D         I +  + I +  ++ +G+   ++   D    +  +SV  +S         
Sbjct: 526 DVPSGTCLLTIEHHHAPITSASWAPDGES-FVTGSLDSQSQLCHWSVPHKSLLYTWPGQY 584

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +   + +PD  +++  S    ++++YV      +++
Sbjct: 585 RVRDC--AITPDGKRLIAISL---QKRIYVYNFITREEE 618


>gi|159899567|ref|YP_001545814.1| hypothetical protein Haur_3048 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159892606|gb|ABX05686.1| hypothetical protein Haur_3048 [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 408

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/270 (14%), Positives = 89/270 (32%), Gaps = 18/270 (6%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +  I Q I          + ++  +         + V   DG+  R +    +   F   
Sbjct: 63  ASSIVQYIQVTPAPDGQHVAYIQLTP----TVIEIRVQAFDGSPARTVFSDFNLRPFYLS 118

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQ 277
           +SPN Q +A+        + +Y++         ++ + +    A  +  +    L+ +  
Sbjct: 119 WSPNSQMLAFLA--SGTTMELYVVPADGSEVAHKVRDGQPSYFA--WKPDSSALLLHTGG 174

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                +     +QS        T     + +++ D S  V         QL  +   G  
Sbjct: 175 GTPVGNTAVHSVQSKDLTFFKETAGDFQAPAWNADGSARVVVVADGEINQLMQIDQAG-- 232

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            ++   +  +  F  V SP    +A+  F    +  + +      + +   E +   A  
Sbjct: 233 -QQALSEPTSEGFMFVLSPDRAKVAYQTFGLQTRSGLMIQTIATGKSQS-FETARPLAFF 290

Query: 397 WSPSGRSLIF----SRKKDGDTGSKLYSID 422
           WSP GRS+      +R +     + +  + 
Sbjct: 291 WSPDGRSVALLVADARPRGPSGDAGIVKVS 320



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 9/112 (8%)

Query: 339 KRISQDKEAS----YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           ++++   +AS    Y     +P G  +A+ + +     I V   DGS  R +  D NL+ 
Sbjct: 55  QQLTLTNDASSIVQYIQVTPAPDGQHVAYIQLTPTVIEIRVQAFDGSPARTVFSDFNLRP 114

Query: 395 P--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              +WSP+ + L F       T  +LY +  +G            S   W  
Sbjct: 115 FYLSWSPNSQMLAFLAS---GTTMELYVVPADGSEVAHKVRDGQPSYFAWKP 163



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 74/229 (32%), Gaps = 41/229 (17%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSES----VVSGIIKNSLCVMDRDGANIRYLTPS 209
             H++            GDF +       S    VV+    N L  +D+ G        S
Sbjct: 182 AVHSVQSKDLTFFKETAGDFQAPAWNADGSARVVVVADGEINQLMQIDQAGQQALSEPTS 241

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              +      SP++ KVAY T+  +    + +      ++               +S +G
Sbjct: 242 EGFMFVL---SPDRAKVAYQTFGLQTRSGLMIQTIATGKSQSFETARPLAFF---WSPDG 295

Query: 270 KRAL-------------------ISVQKDEAMDIY--SVDLQSNATERL----TNTLFIN 304
           +                      +S Q    + ++   +D++S   +RL     +  F+N
Sbjct: 296 RSVALLVADARPRGPSGDAGIVKVSRQAQSGVQVHWEVLDVESGQVKRLKSFVPSGPFLN 355

Query: 305 ISASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDKEA 347
           +   +   ++ + F S           + ++ +      ++++++    
Sbjct: 356 VLPYFDQYAASLTFWSSDSQYLLNNSSDGVWQVHVETGAEQQLTKGAFG 404


>gi|329849400|ref|ZP_08264246.1| prolyl oligopeptidase family protein [Asticcacaulis biprosthecum
           C19]
 gi|328841311|gb|EGF90881.1| prolyl oligopeptidase family protein [Asticcacaulis biprosthecum
           C19]
          Length = 692

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 77/209 (36%), Gaps = 23/209 (11%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SY 309
           +++         P++S++GK       +  +  ++  +       ++T +L +++ A   
Sbjct: 85  RKLAISEGGASNPQWSADGKTLYFVSSRSGSDQVWKTEATGATATQVT-SLALDVQAYQP 143

Query: 310 SPDSSQI-----VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS--PQGDL-- 360
           +PD   +     VF   +  +    V +   +  ++ +       F   W     G    
Sbjct: 144 TPDGKGVVVALAVFPECKGAEIDCTVTKQAEAKAQKSTGVVYTKLFVRHWDTWADGTRNH 203

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGD-----T 414
           + +  F G      V   DG    +  +    +A  T SP  +++ +S +  G      T
Sbjct: 204 LFYVPFGGA----AVSLTDGVDGDVPSKPFGDEAEFTVSPDSQTVYYSVRIAGKTEPWST 259

Query: 415 GSKLYSIDLNGRNETLINTP--AYASDPQ 441
              LYS+ + G   T +     A+ + P+
Sbjct: 260 NFDLYSVPVTGGEATNLTEANLAWDTSPR 288



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/292 (11%), Positives = 84/292 (28%), Gaps = 70/292 (23%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            +     P++S + + + + +                     ++ +    + A + + +G
Sbjct: 90  SEGGASNPQWSADGKTLYFVSSRSGS--DQVWKTEATGATATQVTSLALDVQAYQPTPDG 147

Query: 270 KRALISVQ-----------------------------------------KDEAMDIYSVD 288
           K  ++++                                           D   +     
Sbjct: 148 KGVVVALAVFPECKGAEIDCTVTKQAEAKAQKSTGVVYTKLFVRHWDTWADGTRNHLFYV 207

Query: 289 LQSNATERLTNT---------LFINISASYSPDSSQIVFESDREGKEQLYVMQSN----- 334
               A   LT+                 + SPDS  + +     GK + +    +     
Sbjct: 208 PFGGAAVSLTDGVDGDVPSKPFGDEAEFTVSPDSQTVYYSVRIAGKTEPWSTNFDLYSVP 267

Query: 335 --GSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLV 387
             G +   +++   A    P  S  G  +A+       F  ++F I +      +   + 
Sbjct: 268 VTGGEATNLTEANLAWDTSPRLSLDGKTLAYKAMKRPGFEADRFDIFLRDLKTGKVTAVA 327

Query: 388 EDSNLQAPT--WSPSGRSLIFSRKKDGDTGSK-LYSIDLNGRNETLINTPAY 436
            D +       W+  G+SL+ +    GD G + L+ ID+       ++   +
Sbjct: 328 GDWDRSVDDLKWAKDGKSLLVTA---GDVGLERLFRIDIKSGKVMALSKDGH 376



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 62/177 (35%), Gaps = 10/177 (5%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           ++      D  +    V  +  +        L  +   G     LT +       PR S 
Sbjct: 232 EAEFTVSPDSQTVYYSVRIAGKTEPWSTNFDLYSVPVTGGEATNLTEANLAWDTSPRLSL 291

Query: 222 NQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           + + +AY          D   ++L D +  +     G++   +   +++ +GK  L++  
Sbjct: 292 DGKTLAYKAMKRPGFEADRFDIFLRDLKTGKVTAVAGDWDRSVDDLKWAKDGKSLLVTAG 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQS 333
                 ++ +D++S     L+    I+   +++      V+  S      QLY   S
Sbjct: 352 DVGLERLFRIDIKSGKVMALSKDGHID---AFAETGGSFVYLKSAMNSPSQLYAANS 405



 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              ++ +L + +     P WS  G++L F   + G    +++  +  G   T + +
Sbjct: 80  PATAERKLAISEGGASNPQWSADGKTLYFVSSRSGS--DQVWKTEATGATATQVTS 133


>gi|294674134|ref|YP_003574750.1| S9 family peptidase [Prevotella ruminicola 23]
 gi|294474349|gb|ADE83738.1| peptidase, S9C (acylaminoacyl-peptidase) subfamily [Prevotella
           ruminicola 23]
          Length = 722

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 46/327 (14%), Positives = 100/327 (30%), Gaps = 87/327 (26%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  M+ DG++ + ++ +   I    +FSP+ +KV      + + +     D       +
Sbjct: 118 QLWTMNPDGSDRKQISNTSKPIEGF-KFSPDGKKVILLHSLEFNEIIKKNPDDLPKATGR 176

Query: 252 RIGNF-------------------------------------------RSMILAPRFSSN 268
            + +                                               I    ++ +
Sbjct: 177 LVTDLMYRHWDHYVESIQHPFVADVTEDGIKDGIDILEGEPYECPMEPFGGIEQLDWAPD 236

Query: 269 GKRALI----------SVQKDEAMDIYSV----------DLQSNATE------------- 295
            K              S+  D  + +Y +               A +             
Sbjct: 237 SKSIAYTCRKKTGLEYSISTDSDIYLYIIGTRETKNLCKPADYKAPKVNPTKTLKYQSVN 296

Query: 296 ---RLTNTLFINISASYSPDSSQIVFES-DREGKE----QLYVMQSNGSDQKRISQDKEA 347
               L N +  + +  +SPD   I + S +R+G E    +L V      ++K +++  ++
Sbjct: 297 AKENLKNNVGYDQNPKFSPDGKYIAWTSMERDGYEADRLRLCVYNLATGEKKYVTESFDS 356

Query: 348 SYFDPVWSPQGD-LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           S  D VWS   D +I F         +  +   G  ++L     +        +G+ L+ 
Sbjct: 357 SVEDFVWSDSKDAMIYFIGVWHATINLYAVNWKGELKQLTNTWDDFGQIHLMNNGKQLL- 415

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT 433
             + +  + + LY +  N +      T
Sbjct: 416 MERHNYTSPADLYIVTPNFKKPEKTQT 442



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 83/243 (34%), Gaps = 37/243 (15%)

Query: 220 SPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           S + +++ Y     +       +   +          +         P +  NGK A ++
Sbjct: 57  SADGKQIVYQIGYYSVKANKSQQKIAIINADGTGNTTLTTGSKSETDPTW-YNGKIAFLT 115

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM--QS 333
                   +++++   +  ++++NT        +SPD  +++     E  E +       
Sbjct: 116 -----GGQLWTMNPDGSDRKQISNTSKPIEGFKFSPDGKKVILLHSLEFNEIIKKNPDDL 170

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV---------MKKDGSQER 384
             +  + ++      +   V S Q   +A     G K  I +         M+  G  E+
Sbjct: 171 PKATGRLVTDLMYRHWDHYVESIQHPFVADVTEDGIKDGIDILEGEPYECPMEPFGGIEQ 230

Query: 385 LLVEDSNLQAPTWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTPAYAS 438
           L           W+P  +S+ ++ RKK G      T S +Y   +  R    +  PA   
Sbjct: 231 L----------DWAPDSKSIAYTCRKKTGLEYSISTDSDIYLYIIGTRETKNLCKPADYK 280

Query: 439 DPQ 441
            P+
Sbjct: 281 APK 283


>gi|260575603|ref|ZP_05843601.1| hlyA-like protein [Rhodobacter sp. SW2]
 gi|259022246|gb|EEW25544.1| hlyA-like protein [Rhodobacter sp. SW2]
          Length = 1033

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 79/281 (28%), Gaps = 55/281 (19%)

Query: 216 EPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILA------PRF 265
            P  S +   + + +                      A   +      + A         
Sbjct: 207 NPMISADGSTLVFTSSAALVPGTPPNGTIYQAAVNGAAIAAVSVTAGGVFANGASVNADV 266

Query: 266 SSNGKRALISVQKDE--------AMDIYSVDLQSNATERLTNT-LFIN-----ISASYSP 311
           SS+G+    +               DIY  D+ + A  R++     I+          SP
Sbjct: 267 SSDGRYVTFATTATNFAAGGSVSTYDIYRKDMVTGALVRISTGQTGIDANGDCTHPRISP 326

Query: 312 DSSQIVFESDREG---------KEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLI 361
           D   +VF S                +YV  S  S    I+     A   +P     G+++
Sbjct: 327 DGRYVVFSSTATNLTTAETGSFYADVYVWDSATSSLTNITAAAGLADSLNPDVDAAGNVV 386

Query: 362 AFTKF------SGEKFAIGVMKKDGSQERLLVED--------SNLQAPTWSPSGRSLIFS 407
             T+       +   F I          RL+            + +  + S  GR ++F+
Sbjct: 387 FQTRRALVAADTNTSFDIYSYNLTTHAYRLVSATATGTAVTFGDSENASISGDGRYVVFA 446

Query: 408 RKK------DGDTGSKLYSID-LNGRNETLINTPAYASDPQ 441
                    D +  + ++  D L G    +  TP    +  
Sbjct: 447 SSAASLVAGDSNGYTDIFVKDLLTGAIALVSRTPTAQGNGS 487



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 66/259 (25%), Gaps = 48/259 (18%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNF--RSMILAPRFSSNGKRALISVQKDE------ 280
            T        V            R+G     +       S++G                 
Sbjct: 115 VTTGSGHDYLVGNDALAPITHVSRLGGVGSPTNSYGASISADGNLVAFGGSWTGFGSSNN 174

Query: 281 -AMDIYSVDLQSNATERLTN------TLFINISASYSPDSSQIVFESD--------REGK 325
            A+D++  +LQ+   +           L  + +   S D S +VF S           G 
Sbjct: 175 TAVDVFVKNLQTGVVQNEERNAAGVLGLSGSDNPMISADGSTLVFTSSAALVPGTPPNGT 234

Query: 326 EQLYVMQSNGSDQKRISQDK---EASYFDPVWSPQGDLIAFTKFSGE--------KFAIG 374
                +         ++        +  +   S  G  + F   +           + I 
Sbjct: 235 IYQAAVNGAAIAAVSVTAGGVFANGASVNADVSSDGRYVTFATTATNFAAGGSVSTYDIY 294

Query: 375 VMKKDGSQERLLVED-------SNLQAPTWSPSGRSLIFSRK-------KDGDTGSKLYS 420
                      +           +   P  SP GR ++FS         + G   + +Y 
Sbjct: 295 RKDMVTGALVRISTGQTGIDANGDCTHPRISPDGRYVVFSSTATNLTTAETGSFYADVYV 354

Query: 421 IDLNGRNETLINTPAYASD 439
            D    + T I   A  +D
Sbjct: 355 WDSATSSLTNITAAAGLAD 373



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 65/194 (33%), Gaps = 39/194 (20%)

Query: 209 SRDQILFEPRFSPNQQKVAYATY--------DDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +     PR SP+ + V +++                VY+ D+        I     + 
Sbjct: 314 DANGDCTHPRISPDGRYVVFSSTATNLTTAETGSFYADVYVWDSATSSLT-NITAAAGLA 372

Query: 261 LA--PRFSSNG------KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI------- 305
            +  P   + G      +RAL++   + + DIYS +L +    RL +             
Sbjct: 373 DSLNPDVDAAGNVVFQTRRALVAADTNTSFDIYSYNL-TTHAYRLVSATATGTAVTFGDS 431

Query: 306 -SASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRIS-----QDKEASYFD 351
            +AS S D   +VF S        D  G   ++V          +S     Q   +S   
Sbjct: 432 ENASISGDGRYVVFASSAASLVAGDSNGYTDIFVKDLLTGAIALVSRTPTAQGNGSSGGA 491

Query: 352 PVWSPQGDLIAFTK 365
           P  S  GD I F  
Sbjct: 492 PQISLGGDWIVFES 505


>gi|229591682|ref|YP_002873801.1| hypothetical protein PFLU4256 [Pseudomonas fluorescens SBW25]
 gi|229363548|emb|CAY50815.1| putative exported protein [Pseudomonas fluorescens SBW25]
          Length = 385

 Score = 65.0 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 78/224 (34%), Gaps = 28/224 (12%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPR---FSSNGKRALISVQK 278
            + AYA     D +  Y  D            + S+     PR   FS+NGK   +  + 
Sbjct: 169 NRFAYAGNLGADHVLQYRFDADTGALTPIGTGYVSVPANTGPRHLAFSANGKYLYVVGEM 228

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              +  +S+D +S A   +     I       PD  ++     R+ +             
Sbjct: 229 SGTVTAFSIDDRSGALTPIGVANGI-------PDRLKLAHGEVRDARNN----DLKDDPT 277

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQA 394
            RI         D   SP G L+  ++ +    +   +       R L    VE+   + 
Sbjct: 278 PRIW------AADLRLSPDGKLLLMSERTSSSVSAFAVDAATGGLRFLDNYPVEEKQPRN 331

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             +SP+G+ L+ + +K    G+  Y++   G  + +   P+   
Sbjct: 332 IAFSPNGQWLLVTGEKSDTVGT--YAVSDTGALKRVSEAPSGKG 373



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 70/234 (29%), Gaps = 18/234 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--RSMILAP-RFSSNGKRALIS 275
           FS +     +A         +       +    ++ N       + P   S +GK    +
Sbjct: 27  FSAHGNAATFAYISSPGDGMISQYRLDENNGALKLVNQVNAGDQVNPMALSPDGKTLFAA 86

Query: 276 VQ-KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ K   +  +S+D  S      +        A  + D +     +   G + L V   +
Sbjct: 87  LRVKPFQVQGFSIDPTSGHLTPQSKAPLAESMAYLATDRAGRYLLAASYGADTLSVQPVD 146

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLLVEDSNLQ 393
            +D+  I   K   +   + +   +  A+    G    +      D      +     + 
Sbjct: 147 KADK--ILTYKTGPHAHSLRTDPSNRFAYAGNLGADHVLQYRFDADTGALTPI-GTGYVS 203

Query: 394 AP--------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            P         +S +G+ L    +  G   +  +SID      T I       D
Sbjct: 204 VPANTGPRHLAFSANGKYLYVVGEMSGTVTA--FSIDDRSGALTPIGVANGIPD 255


>gi|83772135|dbj|BAE62265.1| unnamed protein product [Aspergillus oryzae]
          Length = 437

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 74/221 (33%), Gaps = 38/221 (17%)

Query: 214 LFEPRFSPNQQKVAY---ATYDDEDILRVYL----------MDTRIDRAPKRIGNFRSMI 260
            F+  +S +   + Y     +        ++          M+      P   G   ++ 
Sbjct: 216 AFQSSWSSDGNWLTYGVGYWFAGRASNGGWIVCSKADGSEAMNLTTSAIPLSAGGNNTLN 275

Query: 261 LA-PRFSSNGKRALISVQKDEAMD-------IYSVDLQ------SNATERLTNTLFINIS 306
              P F  +G + +  V   +A D       +  + L       +     LTN  + +  
Sbjct: 276 TGFPSFLPDGTKIVFRVWGADAEDGDTSQLGLRILHLDQVTANGTYPVTVLTN--WWDTL 333

Query: 307 ASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL----- 360
            S+SPD ++IVF     G   ++  +  +GSD + ++  +       ++S  G+      
Sbjct: 334 PSFSPDGTKIVFTRRVSGSNYEVCTIAPDGSDLQVLTSSEANDAHAIMYS-TGEYGFQSE 392

Query: 361 -IAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
              +         I +M  DG  +R L         P + P
Sbjct: 393 CALYDNTFQPYGQINIMDADGGNKRALTNSLWEDSMPAYVP 433



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 78/198 (39%), Gaps = 37/198 (18%)

Query: 269 GKRALISVQKDEAMDIYSVD------LQSNATERLTNTLFINISASYSPDSSQI------ 316
           G  A+IS+      +    D      L  ++ E+ T+  F    +S+S D + +      
Sbjct: 178 GDSAVISLNATGTDNETVFDPVARGILSLSSVEQGTSGAF---QSSWSSDGNWLTYGVGY 234

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQ---------DKEASYFDPVWSPQGDLIAFTKF- 366
            F         +   +++GS+   ++          +   +   P + P G  I F  + 
Sbjct: 235 WFAGRASNGGWIVCSKADGSEAMNLTTSAIPLSAGGNNTLNTGFPSFLPDGTKIVFRVWG 294

Query: 367 ----SGEKFAIGV-------MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                G+   +G+       +  +G+    ++ +     P++SP G  ++F+R+  G + 
Sbjct: 295 ADAEDGDTSQLGLRILHLDQVTANGTYPVTVLTNWWDTLPSFSPDGTKIVFTRRVSG-SN 353

Query: 416 SKLYSIDLNGRNETLINT 433
            ++ +I  +G +  ++ +
Sbjct: 354 YEVCTIAPDGSDLQVLTS 371



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 34/107 (31%), Gaps = 7/107 (6%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +     P FSP+  K+ +          V  +            +  +   A  +S+ G+
Sbjct: 328 NWWDTLPSFSPDGTKIVFTRRVSGSNYEVCTIAPDGSDLQVLTSSEANDAHAIMYST-GE 386

Query: 271 R------ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                  AL          I  +D        LTN+L+ +   +Y P
Sbjct: 387 YGFQSECALYDNTFQPYGQINIMDADGGNKRALTNSLWEDSMPAYVP 433


>gi|37521199|ref|NP_924576.1| WD-40 repeat-containing protein [Gloeobacter violaceus PCC 7421]
 gi|35212195|dbj|BAC89571.1| WD-40 repeat protein [Gloeobacter violaceus PCC 7421]
          Length = 1730

 Score = 65.0 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 49/336 (14%), Positives = 119/336 (35%), Gaps = 61/336 (18%)

Query: 129  RLWDV---KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF--VSES 183
            R+ DV    +   ++   F  S   W+       +++Y+      G     + F  V+  
Sbjct: 1341 RVMDVRFSPEGTHLLSASFDKSIRLWQ------VNNLYRLSFKGNGSEVLSMRFSPVNNR 1394

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V++      + +   DG  I  L    + ++      P+ +++   + D    +R++   
Sbjct: 1395 VLAAAANKDIYLWSHDGKLIAKLI-GHEDLVQNFDIRPDGKQIVSVSSD--RTIRLWSSQ 1451

Query: 244  TRIDRAPKRIGNFR-------SMILAPR--------FSSNGKRA---------------- 272
             ++ +   R  N+        S I+A          +S +G                   
Sbjct: 1452 GKLLKIFPRQTNWPFFIRYISSDIIASAGHDNQVHLWSLDGSLLQTFKGHTDSTTGALLL 1511

Query: 273  ---LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
               + S   D  + ++ ++      + LT       S  + P  + +   +D EG+ +L+
Sbjct: 1512 QDKMASFSWDGTIRLWQLN--GKLIKVLTGHKGQIYSFDFQPADNILA-SADSEGEIRLW 1568

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                       +      S ++  +SP G ++A     G    + +    G    +L   
Sbjct: 1569 RGD---GSLLAVLSGHRGSIYNLKFSPDGRILASGSMDGT---VRLWTARGKLLAVLAHH 1622

Query: 390  SN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            S+ ++   +SP+G+ L  + +   D   +++++  +
Sbjct: 1623 SDSIRDVRFSPNGKYLATASE---DGTVRIWNLKGD 1655



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 76/241 (31%), Gaps = 35/241 (14%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILF-------EPRFSPNQQKVAYATYDDEDILR 238
            S    N + +   DG+ ++      D              FS +              +R
Sbjct: 1478 SAGHDNQVHLWSLDGSLLQTFKGHTDSTTGALLLQDKMASFSWDG------------TIR 1525

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            ++ ++    +  K +   +  I +  F       L S   +  + ++      +    L+
Sbjct: 1526 LWQLN---GKLIKVLTGHKGQIYSFDFQP-ADNILASADSEGEIRLWR--GDGSLLAVLS 1579

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   +  +SPD   +   S  +G  +L+  +        +      S  D  +SP G
Sbjct: 1580 GHRGSIYNLKFSPDGRILASGS-MDGTVRLWTAR---GKLLAVLAHHSDSIRDVRFSPNG 1635

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              +A     G    + +    G     L   +++ A  +SP G +L        D   +L
Sbjct: 1636 KYLATASEDGT---VRIWNLKGDLLSTLDVGNSVTALAFSPDGHTLA---SGSADGTLEL 1689

Query: 419  Y 419
            +
Sbjct: 1690 W 1690



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 84/240 (35%), Gaps = 21/240 (8%)

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G  + ++ + +R G  I+      + ++++  FSP+  +  +AT  ++ I+R++ ++   
Sbjct: 1110 GDSQGNIYLQNRSGQTIKSW-KGHESVIYKVDFSPDSLQ--FATAGEDKIIRLWSVN--- 1163

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                K +      + + R+SS+G+           +     D        +   +   I+
Sbjct: 1164 GELLKTLRGHTERVHSIRYSSSGRLLASMSSNSIKLW----DKTGKFIRSINRNIGEAIA 1219

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              +SPD   +          ++  +        R+ +          +SP G+ IA    
Sbjct: 1220 FGWSPDEELLAIPIIAGNSVEITSLS---GQLLRVLKGHTQPVNGANFSPDGNQIASFSS 1276

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  + +      + +              +SP     IF+     D   +L+S D +
Sbjct: 1277 DKT---VRLWNAKSGKFQHAYSGHTDAIWQVEFSPDSS--IFAS-AGEDRTVRLWSKDGH 1330



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 91/249 (36%), Gaps = 30/249 (12%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              + S     ++ + +      ++        +++  FSP+     +A+  ++  +R++ 
Sbjct: 1269 NQIASFSSDKTVRLWNAKSGKFQHAYSGHTDAIWQVEFSPDSS--IFASAGEDRTVRLWS 1326

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-T 300
             D     + K +      ++  RFS  G   L S   D+++ ++ V+       RL+   
Sbjct: 1327 KD---GHSLKILSGHTDRVMDVRFSPEGTHLL-SASFDKSIRLWQVN----NLYRLSFKG 1378

Query: 301  LFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                + S  +SP +++++  +     + +Y+   +G    ++    E    +    P G 
Sbjct: 1379 NGSEVLSMRFSPVNNRVLAAA---ANKDIYLWSHDGKLIAKLI-GHEDLVQNFDIRPDGK 1434

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRSLIFSRKKDGDTG 415
             I           I +    G   ++    +N   P +    S     +I S   D    
Sbjct: 1435 QIVSVSSDRT---IRLWSSQGKLLKIFPRQTNW--PFFIRYISSD---IIASAGHDNQV- 1485

Query: 416  SKLYSIDLN 424
              L+S+D +
Sbjct: 1486 -HLWSLDGS 1493



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 12/155 (7%)

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            R+  +    L+  FS +GK     +  D   +IY  +      +       +     +SP
Sbjct: 1087 RLEGYIGTPLSCDFSPDGK---FILCGDSQGNIYLQNRSGQTIKSWKGHESVIYKVDFSP 1143

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            DS Q        G++++  + S   +  +  +          +S  G L+A    +    
Sbjct: 1144 DSLQFA----TAGEDKIIRLWSVNGELLKTLRGHTERVHSIRYSSSGRLLASMSSN---- 1195

Query: 372  AIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLI 405
            +I +  K G   R +  +     A  WSP    L 
Sbjct: 1196 SIKLWDKTGKFIRSINRNIGEAIAFGWSPDEELLA 1230


>gi|229578216|ref|YP_002836614.1| peptidase S41 [Sulfolobus islandicus Y.G.57.14]
 gi|228008930|gb|ACP44692.1| peptidase S41 [Sulfolobus islandicus Y.G.57.14]
          Length = 1008

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 4/116 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I+  ++   K +L+V + +  + + I + +     +  W P G+  A+    G 
Sbjct: 368 SPDGKKILLSNN---KLELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGY 424

Query: 370 -KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +I + + DG   R+        +P++ P GR L F   +  D  +     +L+
Sbjct: 425 YTQSIKLARIDGKIVRITTPYGYDFSPSFDPDGRYLYFLAARHLDPTNDKVIFNLS 480



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 55/145 (37%), Gaps = 6/145 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
              +  V+     + L ++ +DG N + +     +I    + SP+ +K+  +     + L
Sbjct: 328 ALPNGDVIGVNDDDKLVILGKDG-NEKVINRDFARIERV-KVSPDGKKILLS----NNKL 381

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ +   D A     +   +IL   +  NG+    +  +        +        R+
Sbjct: 382 ELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGYYTQSIKLARIDGKIVRI 441

Query: 298 TNTLFINISASYSPDSSQIVFESDR 322
           T     + S S+ PD   + F + R
Sbjct: 442 TTPYGYDFSPSFDPDGRYLYFLAAR 466



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 89/233 (38%), Gaps = 41/233 (17%)

Query: 221 PN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-- 276
           P+     +++ + DD     V+L+  + D  P RI +   + + P+ S +G++   +V  
Sbjct: 8   PDIRGDLISFTSDDD-----VWLLSLK-DMKPLRITSGLGVSIRPKISPSGRKVAFTVVW 61

Query: 277 --QKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV---FESDREGKEQLYV 330
                +  DIY V  +     R+T     N   A++  +   IV   F +      + Y 
Sbjct: 62  LKSGKQGGDIYVV--EDGQARRVTYFGSRNSRVANWLSEDEIIVITDFHTPFGQWNEAYK 119

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----------FSGEKFAIGVMKKD 379
              N  + +++     ++          ++I   +             G K  + +  +D
Sbjct: 120 ADVNNGETEKLPFGMLSNIVKRD-----NVIVIVRGYQDLPNWKGYKGGTKGELWI-SRD 173

Query: 380 GSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           G +  E+ +  D N+  P        + F    +G     LYS+DLNG++   
Sbjct: 174 GGKTFEKFVSLDGNVSWPMIVK--ERVYFLSNHEG--VGNLYSVDLNGKDLRR 222



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 97/263 (36%), Gaps = 36/263 (13%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G  K  L +  RDG        S D  +  P     +    Y   + E +  +Y +
Sbjct: 158 KGYKGGTKGELWIS-RDGGKTFEKFVSLDGNVSWPMIVKER---VYFLSNHEGVGNLYSV 213

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    +  +R  NF         S +GKR +       A DIY  D + ++  +L   L 
Sbjct: 214 DLN-GKDLRRHTNFTDFYCRNANS-DGKRIVFQ----NAGDIYLYDPEKDSLSKLDIDLP 267

Query: 303 INI---SASYSP----------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +       +            + + I   S    + + ++M+       ++ + +   Y
Sbjct: 268 TDRKKRQPKFVSVIEYMNEAVVNGNYIALTS----RGKAFLMRPWDGPAVQLGKKQGVKY 323

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                 P GD+I       +   + ++ KDG+++ +  + + ++    SP G+ ++ S  
Sbjct: 324 RQIQALPNGDVIGV----NDDDKLVILGKDGNEKVINRDFARIERVKVSPDGKKILLSNN 379

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           K      +L+  +++  N  LI+
Sbjct: 380 K-----LELWVYEIDSDNARLID 397



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 68/234 (29%), Gaps = 36/234 (15%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FS 266
            S   +   P+ SP+ +KVA+     +   +   +    D   +R+  F S       + 
Sbjct: 37  TSGLGVSIRPKISPSGRKVAFTVVWLKSGKQGGDIYVVEDGQARRVTYFGSRNSRVANWL 96

Query: 267 SNGKRALIS---VQKDEAMDIYSVDLQSNATERLTNT---------------LFINISAS 308
           S  +  +I+       +  + Y  D+ +  TE+L                         +
Sbjct: 97  SEDEIIVITDFHTPFGQWNEAYKADVNNGETEKLPFGMLSNIVKRDNVIVIVRGYQDLPN 156

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +            + G +    +  +G          + +   P+     + + F     
Sbjct: 157 WK---------GYKGGTKGELWISRDGGKTFEKFVSLDGNVSWPMIV--KERVYFLSNHE 205

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +  +  +G   R     ++      +  G+ ++F           +Y  D
Sbjct: 206 GVGNLYSVDLNGKDLRRHTNFTDFYCRNANSDGKRIVF------QNAGDIYLYD 253



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDR 322
            S +GK+ L+S  K   ++++  ++ S+   RL +    ++     + P+     +    
Sbjct: 367 VSPDGKKILLSNNK---LELWVYEIDSDNA-RLIDKSEYDLILEFDWHPNGEWFAYAFPE 422

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               Q   +        RI+       F P + P G  + F
Sbjct: 423 GYYTQSIKLARIDGKIVRITT-PYGYDFSPSFDPDGRYLYF 462


>gi|227829433|ref|YP_002831212.1| peptidase S41 [Sulfolobus islandicus L.S.2.15]
 gi|227455880|gb|ACP34567.1| peptidase S41 [Sulfolobus islandicus L.S.2.15]
          Length = 1008

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 4/116 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I+  ++   K +L+V + +  + + I + +     +  W P G+  A+    G 
Sbjct: 368 SPDGKKILLSNN---KLELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGY 424

Query: 370 -KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +I + + DG   R+        +P++ P GR L F   +  D  +     +L+
Sbjct: 425 YTQSIKLARIDGKIVRITTPYGYDFSPSFDPDGRYLYFLAARHLDPTNDKVIFNLS 480



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 55/145 (37%), Gaps = 6/145 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
              +  V+     + L ++ +DG N + +     +I    + SP+ +K+  +     + L
Sbjct: 328 ALPNGDVIGVNDDDKLVILGKDG-NEKVINRDFARIERV-KVSPDGKKILLS----NNKL 381

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ +   D A     +   +IL   +  NG+    +  +        +        R+
Sbjct: 382 ELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGYYTQSIKLARIDGKIVRI 441

Query: 298 TNTLFINISASYSPDSSQIVFESDR 322
           T     + S S+ PD   + F + R
Sbjct: 442 TTPYGYDFSPSFDPDGRYLYFLAAR 466



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 89/233 (38%), Gaps = 41/233 (17%)

Query: 221 PN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-- 276
           P+     +++ + DD     V+L+  + D  P RI +   + + P+ S +G++   +V  
Sbjct: 8   PDIRGDLISFTSDDD-----VWLLSLK-DMKPLRITSGLGVSIRPKISPSGRKVAFTVVW 61

Query: 277 --QKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV---FESDREGKEQLYV 330
                +  DIY V  +     R+T     N   A++  +   IV   F +      + Y 
Sbjct: 62  LKSGKQGGDIYVV--EDGQARRVTYFGSRNSRVANWLSEDEIIVITDFHTPFGQWNEAYK 119

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----------FSGEKFAIGVMKKD 379
           +  N  + +++     ++          ++I   +             G K  + +  +D
Sbjct: 120 VDVNNGETEKLPFGMLSNIVKRD-----NVIVIVRGYQDLPNWKGYKGGTKGELWI-SRD 173

Query: 380 GSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           G +  E+ +  D N   P        + F    +G     LYS+DLNG++   
Sbjct: 174 GGKTFEKFVSLDGNASWPMIVK--ERVYFLSNHEG--VGNLYSVDLNGKDLRR 222



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 74/236 (31%), Gaps = 40/236 (16%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FS 266
            S   +   P+ SP+ +KVA+     +   +   +    D   +R+  F S       + 
Sbjct: 37  TSGLGVSIRPKISPSGRKVAFTVVWLKSGKQGGDIYVVEDGQARRVTYFGSRNSRVANWL 96

Query: 267 SNGKRALIS---VQKDEAMDIYSVDLQSNATERLTNT---------------LFINISAS 308
           S  +  +I+       +  + Y VD+ +  TE+L                         +
Sbjct: 97  SEDEIIVITDFHTPFGQWNEAYKVDVNNGETEKLPFGMLSNIVKRDNVIVIVRGYQDLPN 156

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSD--QKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +            + G +    +  +G    +K +S D  AS+   V     + + F   
Sbjct: 157 WK---------GYKGGTKGELWISRDGGKTFEKFVSLDGNASWPMIV----KERVYFLSN 203

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                 +  +  +G   R     ++      +  G+ ++F           +Y  D
Sbjct: 204 HEGVGNLYSVDLNGKDLRRHTNFTDFYCRNANSDGKRIVF------QNAGDIYLYD 253



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 96/263 (36%), Gaps = 36/263 (13%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G  K  L +  RDG        S D     P     +    Y   + E +  +Y +
Sbjct: 158 KGYKGGTKGELWIS-RDGGKTFEKFVSLDGNASWPMIVKER---VYFLSNHEGVGNLYSV 213

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    +  +R  NF         S +GKR +       A DIY  D + ++  +L   L 
Sbjct: 214 DLN-GKDLRRHTNFTDFYCRNANS-DGKRIVFQ----NAGDIYLYDPEKDSLSKLDIDLP 267

Query: 303 INI---SASYSP----------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +       +            + + I   S    + + ++M+       ++ + +   Y
Sbjct: 268 TDRKKRQPKFVSVIEYMNEAVVNGNYIALTS----RGKAFLMRPWDGPAVQLGKKQGVKY 323

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                 P GD+I       +   + ++ KDG+++ +  + + ++    SP G+ ++ S  
Sbjct: 324 RQIQALPNGDVIGV----NDDDKLVILGKDGNEKVINRDFARIERVKVSPDGKKILLSNN 379

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           K      +L+  +++  N  LI+
Sbjct: 380 K-----LELWVYEIDSDNARLID 397



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDR 322
            S +GK+ L+S  K   ++++  ++ S+   RL +    ++     + P+     +    
Sbjct: 367 VSPDGKKILLSNNK---LELWVYEIDSDNA-RLIDKSEYDLILEFDWHPNGEWFAYAFPE 422

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               Q   +        RI+       F P + P G  + F
Sbjct: 423 GYYTQSIKLARIDGKIVRITT-PYGYDFSPSFDPDGRYLYF 462


>gi|284996815|ref|YP_003418582.1| peptidase S41 [Sulfolobus islandicus L.D.8.5]
 gi|284444710|gb|ADB86212.1| peptidase S41 [Sulfolobus islandicus L.D.8.5]
          Length = 1008

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 4/116 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I+  ++   K +L+V + +  + + I + +     +  W P G+  A+    G 
Sbjct: 368 SPDGKKILLSNN---KLELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGY 424

Query: 370 -KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +I + + DG   R+        +P++ P GR L F   +  D  +     +L+
Sbjct: 425 YTQSIKLARIDGKIVRITTPYGYDFSPSFDPDGRYLYFLAARHLDPTNDKVIFNLS 480



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 55/145 (37%), Gaps = 6/145 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
              +  V+     + L ++ +DG N + +     +I    + SP+ +K+  +     + L
Sbjct: 328 ALPNGDVIGVNDDDKLVILGKDG-NEKVINRDFARIERV-KVSPDGKKILLS----NNKL 381

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ +   D A     +   +IL   +  NG+    +  +        +        R+
Sbjct: 382 ELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGYYTQSIKLARIDGKIVRI 441

Query: 298 TNTLFINISASYSPDSSQIVFESDR 322
           T     + S S+ PD   + F + R
Sbjct: 442 TTPYGYDFSPSFDPDGRYLYFLAAR 466



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 66/221 (29%), Gaps = 63/221 (28%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDR 322
            +  G     +   D    ++ + L+     R+T+ L ++I    SP   ++ F     +
Sbjct: 8   PDIRGDLISFTSDDD----VWLLSLKDMKPLRITSGLGVSIRPKISPSGRKVAFTVVWLK 63

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVM 376
            GK+   +        +R++     +     W  + ++I  T F        E + + V 
Sbjct: 64  SGKQGGDIYVVEDGQARRVTYFGSRNSRVANWLSEDEIIVITDFHTPFGQWNEAYKVDVN 123

Query: 377 KKDGSQE-------------RLLVEDSNLQAPTW-------------SPSGRS------- 403
             +  +               +++       P W             S  G         
Sbjct: 124 NGETEKLPFGMLSNIVKRDNVIVIVRGYQDLPNWKGYKGGTKGELWISRDGGKTFEKFVS 183

Query: 404 --------------LIFSRKKDGDTGSKLYSIDLNGRNETL 430
                         + F    +G     LYS+DLNG++   
Sbjct: 184 LYGNVSWPMIVKERVYFLSNHEG--VGNLYSVDLNGKDLRR 222



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 68/234 (29%), Gaps = 36/234 (15%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FS 266
            S   +   P+ SP+ +KVA+     +   +   +    D   +R+  F S       + 
Sbjct: 37  TSGLGVSIRPKISPSGRKVAFTVVWLKSGKQGGDIYVVEDGQARRVTYFGSRNSRVANWL 96

Query: 267 SNGKRALIS---VQKDEAMDIYSVDLQSNATERLTNT---------------LFINISAS 308
           S  +  +I+       +  + Y VD+ +  TE+L                         +
Sbjct: 97  SEDEIIVITDFHTPFGQWNEAYKVDVNNGETEKLPFGMLSNIVKRDNVIVIVRGYQDLPN 156

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +            + G +    +  +G            +   P+     + + F     
Sbjct: 157 WK---------GYKGGTKGELWISRDGGKTFEKFVSLYGNVSWPMIV--KERVYFLSNHE 205

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +  +  +G   R     ++      +  G+ ++F           +Y  D
Sbjct: 206 GVGNLYSVDLNGKDLRRHTNFTDFYCRNANSDGKRIVF------QNAGDIYLYD 253



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDR 322
            S +GK+ L+S  K   ++++  ++ S+   RL +    ++     + P+     +    
Sbjct: 367 VSPDGKKILLSNNK---LELWVYEIDSDNA-RLIDKSEYDLILEFDWHPNGEWFAYAFPE 422

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               Q   +        RI+       F P + P G  + F
Sbjct: 423 GYYTQSIKLARIDGKIVRITT-PYGYDFSPSFDPDGRYLYF 462



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 96/263 (36%), Gaps = 36/263 (13%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G  K  L +  RDG        S    +  P     +    Y   + E +  +Y +
Sbjct: 158 KGYKGGTKGELWIS-RDGGKTFEKFVSLYGNVSWPMIVKER---VYFLSNHEGVGNLYSV 213

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    +  +R  NF         S +GKR +       A DIY  D + ++  +L   L 
Sbjct: 214 DLN-GKDLRRHTNFTDFYCRNANS-DGKRIVFQ----NAGDIYLYDPEKDSLSKLDIDLP 267

Query: 303 INI---SASYSP----------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +       +            + + I   S    + + ++M+       ++ + +   Y
Sbjct: 268 TDRKKRQPKFVSVIEYMNEAVVNGNYIALTS----RGKAFLMRPWDGPAVQLGKKQGVKY 323

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                 P GD+I       +   + ++ KDG+++ +  + + ++    SP G+ ++ S  
Sbjct: 324 RQIQALPNGDVIGV----NDDDKLVILGKDGNEKVINRDFARIERVKVSPDGKKILLSNN 379

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           K      +L+  +++  N  LI+
Sbjct: 380 K-----LELWVYEIDSDNARLID 397


>gi|119488022|ref|ZP_01621466.1| WD-repeat protein [Lyngbya sp. PCC 8106]
 gi|119455311|gb|EAW36450.1| WD-repeat protein [Lyngbya sp. PCC 8106]
          Length = 580

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 81/253 (32%), Gaps = 16/253 (6%)

Query: 160 DDIYQSITG--EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           D  Y   T   E       +  V    +SG    S+ V +     +R      +  + E 
Sbjct: 281 DQTYALATSLEESSGEILSVEIVPPYAISGNSNGSISVWNLATGGLRKTWKGHNSSINEI 340

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALIS 275
             SPN Q +A A+ D    L   +     D  P         + +L+  FS +G++   S
Sbjct: 341 AVSPNGQILATASDDGSIKLWDLMTAINTDTLPLLYTLKEHSNAVLSVEFSPDGRKLA-S 399

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSN 334
              D  + I+  D Q+             +SA + SPD   +   S       + +    
Sbjct: 400 GSWDNLIMIW--DTQTGELLNTLIGHSQMVSAIAISPDGKILASGSK---DNTIKIWNLE 454

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNL 392
             +                 SP G ++A          I + +   +Q   R+      +
Sbjct: 455 TGELIHTLTGHALPILSLAISPDGKILASGSADST---IALWELQTAQPIRRMSGHTDGV 511

Query: 393 QAPTWSPSGRSLI 405
            +   S   R+L+
Sbjct: 512 WSVVISADNRTLV 524


>gi|73668092|ref|YP_304107.1| WD repeat-containing protein [Methanosarcina barkeri str. Fusaro]
 gi|72395254|gb|AAZ69527.1| WD-40 repeat-containing protein [Methanosarcina barkeri str.
           Fusaro]
          Length = 505

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 89/257 (34%), Gaps = 20/257 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   N+L V D    +   ++    + + +   +P+ +    ++YD      + + D +
Sbjct: 150 SGSSDNTLKVWDLKKLDEETISTGHSKSVNKIVITPDGKLAVSSSYDG----TLKVWDLK 205

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +      +     + +GKR  IS   D+ + ++  DL+      L        
Sbjct: 206 TKEEKVTLKGHSGPVTDFVITPDGKRI-ISGSSDKTLRVW--DLKKGNMT-LKGHKREVT 261

Query: 306 SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S + + D    +  S DR     + V        K   +  +         P  + I  +
Sbjct: 262 SVAITSDGKYAISGSFDRT----IKVWDLENGKIKVTLEGHKNYISTISIIPNKNCIV-S 316

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               E   +  + +      L+    ++ +   +P G+S++      GD   K++S++  
Sbjct: 317 SSHDETLKVWDLDRGIDTITLIGHSGSVSSVAITPDGKSIV---SASGDGTHKIWSLE-- 371

Query: 425 GRNETLINTPAYASDPQ 441
              E +     + S P 
Sbjct: 372 -NREEIATLEGHKSAPS 387



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 84/251 (33%), Gaps = 25/251 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    +L V D +         +  + +     + + + V   + D      + + + 
Sbjct: 23  VSGSHDGTLKVWDLEKWREIRSLRAHSKSITAFAITSDGKLVVLGSLDG----NLEVWNL 78

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                          I     + +GKR  +S   D  + ++  DL+    E LT  +  +
Sbjct: 79  ETGEEKAAFKEHSEPITEIVITPDGKR-AVSGSSDNTLKVW--DLE--KMEELTTLISHS 133

Query: 305 ISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            S S    +P     +  S       L V      D++ IS     S    V +P G L 
Sbjct: 134 NSVSKIAITPSGKYAISGSS---DNTLKVWDLKKLDEETISTGHSKSVNKIVITPDGKLA 190

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             + + G    + V      +E++ +      +     +P G+ +I      G +   L 
Sbjct: 191 VSSSYDGT---LKVWDLKTKEEKVTLKGHSGPVTDFVITPDGKRII-----SGSSDKTLR 242

Query: 420 SIDLNGRNETL 430
             DL   N TL
Sbjct: 243 VWDLKKGNMTL 253



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 83/251 (33%), Gaps = 24/251 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS     +L V D      +         + +   +P+ +++   + D      + + D 
Sbjct: 191 VSSSYDGTLKVWDLKTKEEKVTLKGHSGPVTDFVITPDGKRIISGSSDK----TLRVWDL 246

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
           +       +   +  + +   +S+GK   IS   D  + ++  DL++   +  L      
Sbjct: 247 KKGNMT--LKGHKREVTSVAITSDGKY-AISGSFDRTIKVW--DLENGKIKVTLEGHKNY 301

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + S  P+ + IV  S     E L V   +             S      +P G  I  
Sbjct: 302 ISTISIIPNKNCIVSSSH---DETLKVWDLDRGIDTITLIGHSGSVSSVAITPDGKSIVS 358

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDG----DTGS 416
               G    I  ++   ++E +   + +  AP+    +P G+  + +         D   
Sbjct: 359 ASGDGT-HKIWSLE---NREEIATLEGHKSAPSTIVITPDGKYAVSASYDRTIKILDLKK 414

Query: 417 KLYSIDLNGRN 427
           ++    L G  
Sbjct: 415 QIVKTSLRGHT 425


>gi|332883368|gb|EGK03651.1| hypothetical protein HMPREF9456_01718 [Dysgonomonas mossii DSM
           22836]
          Length = 397

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 77/195 (39%), Gaps = 18/195 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-------FSSNGK 270
           R+SP+ + + +A     D +  + ++     +  ++G   +  +APR       F  NGK
Sbjct: 197 RYSPDGKYL-FADDLGTDKIHKFTINEEDAGSYLKVGTPAAFNVAPRSGPRHLDFHPNGK 255

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISA--SYSPDSSQIVFESDR-- 322
            A +  +   A+  ++ D  +    ++     +TL    SA    SPD  + ++ S+R  
Sbjct: 256 YAYLINELSGAVIAFNYDANAGNLTQIQTIQADTLGAKGSADIHVSPDG-KFLYASNRLK 314

Query: 323 -EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +G     + Q++G   K   Q+      + V +P G  +       +   I ++ +   
Sbjct: 315 GDGIAIFSINQADGKLTKVGYQETGVHPRNFVITPNGKFLLVASRDNDVIQIFLIDRVTG 374

Query: 382 QERLLVEDSNLQAPT 396
                 +D  L  P 
Sbjct: 375 LLENTYKDIELDMPV 389



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 51/379 (13%), Positives = 115/379 (30%), Gaps = 90/379 (23%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQ--------VLVTGRVIKEGKDRLRVEFRL 130
           F ++S  S KQK    +S     D  ++ A+         L+ G       + + V ++ 
Sbjct: 10  FAVLSLISCKQKTNVDNSNIDPSDTTNMSAETISDETSLYLLVGTYTTGESEGIYV-YQ- 67

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +D          K+ S           +++  Y +I  E     + +  VSE+  +    
Sbjct: 68  FDTVSG----FSKYKSVV--------KVTNPSYLTINKEG----THVYSVSETGDAKAGA 111

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRF---SPNQQKVAYATYDDEDILRVYLMDTRID 247
           N+     +DG     L  S+     +P +       + V  A Y    I    +      
Sbjct: 112 NAFVFDKKDGT--LKLLNSQLTGGADPCYIELDNTGKHVVTANYSGGSITAFDINGDGTL 169

Query: 248 RAPKRIGNFRS-----------MILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
               ++  F              +   R+S +GK         + +  ++++   + +  
Sbjct: 170 TTAAQLIRFTGKGADAERQKAPHLHCVRYSPDGKYLFADDLGTDKIHKFTINEEDAGSYL 229

Query: 296 RLTNTLFINISAS-------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           ++      N++         + P+       ++  G    +   +N  +  +I   +  +
Sbjct: 230 KVGTPAAFNVAPRSGPRHLDFHPNGKYAYLINELSGAVIAFNYDANAGNLTQIQTIQADT 289

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                                   I V                      SP G+ L ++ 
Sbjct: 290 LGAK----------------GSADIHV----------------------SPDGKFL-YAS 310

Query: 409 KKDGDTGSKLYSID-LNGR 426
            +    G  ++SI+  +G+
Sbjct: 311 NRLKGDGIAIFSINQADGK 329


>gi|303237147|ref|ZP_07323717.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           disiens FB035-09AN]
 gi|302482534|gb|EFL45559.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           disiens FB035-09AN]
          Length = 722

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 77/234 (32%), Gaps = 65/234 (27%)

Query: 267 SNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +G + +  V      +      +Y +D      + LT +     SA +  D++ I F S
Sbjct: 57  PDGSKIIYQVGYYSVKENRGHQVLYIMDANGKNAKLLTTSAKSETSAEWL-DNNTIAFMS 115

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA------------------ 362
                 Q++ M SNG ++K+IS + E       +SP    +                   
Sbjct: 116 ----GGQVWTMDSNGGNRKQIS-NSEIEIEGFAFSPDRKQVVLLKSIPYYGSIKKNPDDL 170

Query: 363 -------FTKFSGEKFAIGVMK----------KDGSQ------------ERLLVEDSNLQ 393
                   T  +   +   V             DGS             E  L     ++
Sbjct: 171 PKTTGMVVTDMNYRHWDHYVQSIVHPFLANVAADGSINEGYDILEGEPYESPLAPFGGIE 230

Query: 394 APTWSPSGRSLIFS-RKKDG-----DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              WS   +S+ ++ RKK+G      T + +Y  ++  +    +  PA    P+
Sbjct: 231 QIAWSKDSKSIAYTCRKKEGVDYATSTDADIYLYNIASKKSVNLCKPAGYVAPK 284



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/321 (13%), Positives = 100/321 (31%), Gaps = 85/321 (26%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK------VAYATYDDEDI--------- 236
            +  MD +G N + ++ S  +I     FSP++++      + Y     ++          
Sbjct: 118 QVWTMDSNGGNRKQISNSEIEIEGF-AFSPDRKQVVLLKSIPYYGSIKKNPDDLPKTTGM 176

Query: 237 ------LRVYLMDTRIDRAP--KRIGNFRSMI--------------LAP-------RFSS 267
                  R +    +    P    +    S+               LAP        +S 
Sbjct: 177 VVTDMNYRHWDHYVQSIVHPFLANVAADGSINEGYDILEGEPYESPLAPFGGIEQIAWSK 236

Query: 268 NGKRALISVQKDEA--------MDIYSVDLQSNATERL-------------TNTL----- 301
           + K    + +K E          DIY  ++ S  +  L             T +L     
Sbjct: 237 DSKSIAYTCRKKEGVDYATSTDADIYLYNIASKKSVNLCKPAGYVAPKKDMTKSLRNQAV 296

Query: 302 ---------FINISASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEA 347
                      +++  +SPD   I ++S         + +L V +     +  +S+  ++
Sbjct: 297 NNQSGDFNVGYDVNPKFSPDGKYIAWQSMKHDGYESDRNRLCVYELATGKKTYVSEAFDS 356

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +    VW+P      F         I      G  ++L     N    +   +    + +
Sbjct: 357 NVDSYVWAPNSKDFYFIGVWHAVQNIYQTNLKGEVKQLTEGQHNYVDVSLLGNSGKKLLA 416

Query: 408 RKKDGDTGSKLYSIDLNGRNE 428
            ++     ++++ +  + + +
Sbjct: 417 MRQSHQMPTEIFVVTPSKKEK 437



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 76/277 (27%), Gaps = 53/277 (19%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        L +MD +G N + LT S            +   +A+ +       +V+ 
Sbjct: 69  YSVKENRGHQVLYIMDANGKNAKLLTTSAKSETSAEWL--DNNTIAFMS-----GGQVWT 121

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTN 299
           MD+      K+I N    I    FS + K+ ++  S+    ++     DL       +T+
Sbjct: 122 MDSN-GGNRKQISNSEIEIEGFAFSPDRKQVVLLKSIPYYGSIKKNPDDLPKTTGMVVTD 180

Query: 300 TLFINISASYSPDSSQIV--FESDREGKEQLYV-MQSNGSDQKRISQDKEASYFDPVWSP 356
             +      +      IV  F ++      +         +                WS 
Sbjct: 181 MNYR----HWDHYVQSIVHPFLANVAADGSINEGYDILEGEPYESPLAPFGGIEQIAWSK 236

Query: 357 QGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVED------------------- 389
               IA+T    E           I +      +   L +                    
Sbjct: 237 DSKSIAYTCRKKEGVDYATSTDADIYLYNIASKKSVNLCKPAGYVAPKKDMTKSLRNQAV 296

Query: 390 ---------SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                         P +SP G+ + +   K     S 
Sbjct: 297 NNQSGDFNVGYDVNPKFSPDGKYIAWQSMKHDGYESD 333



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 13/103 (12%)

Query: 310 SPDSSQIVF------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +PD S+I++        +  G + LY+M +NG + K ++   + S     W    + IAF
Sbjct: 56  NPDGSKIIYQVGYYSVKENRGHQVLYIMDANGKNAKLLTTSAK-SETSAEWL-DNNTIAF 113

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLI 405
                    +  M  +G   + +      ++   +SP  + ++
Sbjct: 114 MS----GGQVWTMDSNGGNRKQISNSEIEIEGFAFSPDRKQVV 152


>gi|159124395|gb|EDP49513.1| wd-repeat protein [Aspergillus fumigatus A1163]
          Length = 1029

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 73/221 (33%), Gaps = 18/221 (8%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    ++ + +     +R         +    FS N Q +A  + D      + L + 
Sbjct: 781 VSGSSDKTIKLWNPTMVELREAHKDHSDSIGSIAFSSNGQLLASGSNDK----TIRLWNP 836

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 + +      + +  FS +  + L+S   D+ + ++  D ++    R        
Sbjct: 837 NTGELHQTLYGHSDSVRSVAFSKD-SQLLVSGSNDKTIKLW--DPRTGELRRTLQGHSDQ 893

Query: 305 I-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           + S ++SP+   +   S     + + +      +  +             +SP   L+A 
Sbjct: 894 VCSVTFSPNGHLLASCSY---DKTIKIWNPTSGEVCQTLNGHSYLVRSLAFSPNNQLLAS 950

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           + +        +     ++    +E  +     WS  G  +
Sbjct: 951 SSYDKTT---KLWNPATAELHQTLEGHSGW--VWS--GTKI 984



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 67/207 (32%), Gaps = 23/207 (11%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           ++  +  R+  +        + +     ++ A  FS +G     S   D+ + ++  D  
Sbjct: 487 HELGNWHRLPEVKESWSTELQTLEGHSELVRAVAFSPSGHLLA-SGSYDKTIKLW--DPT 543

Query: 291 SNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +    +       +I S  +S D   +   S+      + +      + +R  Q    S 
Sbjct: 544 TGELHQTLQGHSDSIQSVFFSSDGKLLASSSN---DNTIKLWNPATGELRRTLQGHSDSV 600

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               +S  G L+A          I + +    +    +   +     WS     + FS+ 
Sbjct: 601 RSVAFSSNGKLLASGSNDKT---IKLWEPITGKLHQTLNGHSNWI--WS-----VAFSQN 650

Query: 410 KD------GDTGSKLYSIDLNGRNETL 430
                    D   +++ +     ++TL
Sbjct: 651 DQLLASASFDNTVRIWDVATGKLHKTL 677



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 60/186 (32%), Gaps = 14/186 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                  +++    FSP+   +A  +YD      + L D       + +      I +  
Sbjct: 507 QTLEGHSELVRAVAFSPSGHLLASGSYDK----TIKLWDPTTGELHQTLQGHSDSIQSVF 562

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDRE 323
           FSS+GK    S   D  + ++  +  +    R       ++ S ++S +   +   S+  
Sbjct: 563 FSSDGKLLA-SSSNDNTIKLW--NPATGELRRTLQGHSDSVRSVAFSSNGKLLASGSN-- 617

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + + +       +         +   +S    L+A   F      + +      + 
Sbjct: 618 -DKTIKLWEPITGKLHQTLNGHSNWIWSVAFSQNDQLLASASFDNT---VRIWDVATGKL 673

Query: 384 RLLVED 389
              ++ 
Sbjct: 674 HKTLKG 679



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 66/226 (29%), Gaps = 19/226 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D     +          +    FS + + +A ++ D+     + L +  
Sbjct: 530 SGSYDKTIKLWDPTTGELHQTLQGHSDSIQSVFFSSDGKLLASSSNDN----TIKLWNPA 585

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + +      + +  FSSNGK    S   D+ + ++   +     + L        
Sbjct: 586 TGELRRTLQGHSDSVRSVAFSSNGKLLA-SGSNDKTIKLWE-PITGKLHQTLNGHSNWIW 643

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++S +   +   S       + +         +  +          +S          
Sbjct: 644 SVAFSQNDQLLASASF---DNTVRIWDVATGKLHKTLKGHSGIVLSVAFS---SSSQLLA 697

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            S E   I +      + R  +   +    T       + FS  + 
Sbjct: 698 SSSEDNTIKLWDPITGELRQTLRGHSDSVAT-------VAFSANRQ 736



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 64/203 (31%), Gaps = 37/203 (18%)

Query: 113 TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            G +      +L          RLW+    +  + +  +    S R +A   S D     
Sbjct: 810 IGSIAFSSNGQLLASGSNDKTIRLWNPNTGE--LHQTLYGHSDSVRSVA--FSKD----- 860

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                         S+ +VSG    ++ + D     +R         +    FSPN   +
Sbjct: 861 --------------SQLLVSGSNDKTIKLWDPRTGELRRTLQGHSDQVCSVTFSPNGHLL 906

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A  +YD      + + +       + +     ++ +  FS N  + L S   D+   ++ 
Sbjct: 907 ASCSYDK----TIKIWNPTSGEVCQTLNGHSYLVRSLAFSPN-NQLLASSSYDKTTKLW- 960

Query: 287 VDLQSNATER-LTNTLFINISAS 308
            +  +    + L        S +
Sbjct: 961 -NPATAELHQTLEGHSGWVWSGT 982


>gi|229583069|ref|YP_002841468.1| peptidase S41 [Sulfolobus islandicus Y.N.15.51]
 gi|228013785|gb|ACP49546.1| peptidase S41 [Sulfolobus islandicus Y.N.15.51]
          Length = 1008

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 4/116 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I+  ++   K +L+V + +  + + I + +     +  W P G+  A+    G 
Sbjct: 368 SPDGKKILLSNN---KLELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGY 424

Query: 370 -KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +I + + DG   R+        +P++ P GR L F   +  D  +     +L+
Sbjct: 425 YTQSIKLARIDGKIVRITTPYGYDFSPSFDPDGRYLYFLAARHLDPTNDKVIFNLS 480



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 55/145 (37%), Gaps = 6/145 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
              +  V+     + L ++ +DG N + +     +I    + SP+ +K+  +     + L
Sbjct: 328 ALPNGDVIGVNDDDKLVILGKDG-NEKVINRDFARIERV-KVSPDGKKILLS----NNKL 381

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ +   D A     +   +IL   +  NG+    +  +        +        R+
Sbjct: 382 ELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGYYTQSIKLARIDGKIVRI 441

Query: 298 TNTLFINISASYSPDSSQIVFESDR 322
           T     + S S+ PD   + F + R
Sbjct: 442 TTPYGYDFSPSFDPDGRYLYFLAAR 466



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 89/233 (38%), Gaps = 41/233 (17%)

Query: 221 PN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-- 276
           P+     +++ + DD     V+L+  + D  P RI +   + + P+ S +G++   +V  
Sbjct: 8   PDIRGDLISFTSDDD-----VWLLSLK-DMKPLRITSGLGVSIRPKISPSGRKVAFTVVW 61

Query: 277 --QKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV---FESDREGKEQLYV 330
                +  DIY V  +     R+T     N   A++  +   IV   F +      + Y 
Sbjct: 62  LKSGKQGGDIYVV--EDGQARRVTYFGSRNSRVANWLSEDEIIVITDFHTPFGQWNEAYK 119

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----------FSGEKFAIGVMKKD 379
              N  + +++     ++          ++I   +             G K  + +  +D
Sbjct: 120 ADVNNGETEKLPFGMLSNIVKRD-----NVIVIVRGYQDLPNWKGYKGGTKGELWI-SRD 173

Query: 380 GSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           G +  E+ +  D N+  P        + F    +G     LYS+DLNG++   
Sbjct: 174 GGKTFEKFVSLDGNVSWPMIVK--ERVYFLSNHEG--VGNLYSVDLNGKDLRR 222



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 97/263 (36%), Gaps = 36/263 (13%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G  K  L +  RDG        S D  +  P     +    Y   + E +  +Y +
Sbjct: 158 KGYKGGTKGELWIS-RDGGKTFEKFVSLDGNVSWPMIVKER---VYFLSNHEGVGNLYSV 213

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    +  +R  NF         S +GKR +       A DIY  D + ++  +L   L 
Sbjct: 214 DLN-GKDLRRHTNFTDFYCRNANS-DGKRIVFQ----NAGDIYLYDPEKDSLSKLDIDLP 267

Query: 303 INI---SASYSP----------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +       +            + + I   S    + + ++M+       ++ + +   Y
Sbjct: 268 TDRKKRQPKFVSVIEYMNEAVVNGNYIALTS----RGKAFLMRPWDGPAVQLGKKQGVKY 323

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                 P GD+I       +   + ++ KDG+++ +  + + ++    SP G+ ++ S  
Sbjct: 324 RQIQALPNGDVIGV----NDDDKLVILGKDGNEKVINRDFARIERVKVSPDGKKILLSNN 379

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           K      +L+  +++  N  LI+
Sbjct: 380 K-----LELWVYEIDSDNARLID 397



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 68/234 (29%), Gaps = 36/234 (15%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FS 266
            S   +   P+ SP+ +KVA+     +   +   +    D   +R+  F S       + 
Sbjct: 37  TSGLGVSIRPKISPSGRKVAFTVVWLKSGKQGGDIYVVEDGQARRVTYFGSRNSRVANWL 96

Query: 267 SNGKRALIS---VQKDEAMDIYSVDLQSNATERLTNT---------------LFINISAS 308
           S  +  +I+       +  + Y  D+ +  TE+L                         +
Sbjct: 97  SEDEIIVITDFHTPFGQWNEAYKADVNNGETEKLPFGMLSNIVKRDNVIVIVRGYQDLPN 156

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +            + G +    +  +G          + +   P+     + + F     
Sbjct: 157 WK---------GYKGGTKGELWISRDGGKTFEKFVSLDGNVSWPMIV--KERVYFLSNHE 205

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +  +  +G   R     ++      +  G+ ++F           +Y  D
Sbjct: 206 GVGNLYSVDLNGKDLRRHTNFTDFYCRNANSDGKRIVF------QNAGDIYLYD 253



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDR 322
            S +GK+ L+S  K   ++++  ++ S+   RL +    ++     + P+     +    
Sbjct: 367 VSPDGKKILLSNNK---LELWVYEIDSDNA-RLIDKSEYDLILEFDWHPNGEWFAYAFPE 422

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               Q   +        RI+       F P + P G  + F
Sbjct: 423 GYYTQSIKLARIDGKIVRITT-PYGYDFSPSFDPDGRYLYF 462


>gi|153876107|ref|ZP_02003595.1| Serine/Threonine protein kinase with WD40 repeats [Beggiatoa sp.
           PS]
 gi|152067430|gb|EDN66406.1| Serine/Threonine protein kinase with WD40 repeats [Beggiatoa sp.
           PS]
          Length = 261

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 83/250 (33%), Gaps = 36/250 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G++I  G +   +  +LWDV + + +   +            HT  D I   I    G  
Sbjct: 7   GKIIVSGSEDHTI--KLWDVSNGRCLNTLQ-----------GHT--DRIRSVIFNPNG-- 49

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                   +SV SG   +++ + D                ++   FSP+ Q +  A+Y+ 
Sbjct: 50  --------QSVASGSDDHTIKLWDVYTGKCLNTLLGHKNWVWSISFSPDGQSIVSASYNK 101

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L +    +    +      I +  FS +G+    S   D+ +  +  D+ +  
Sbjct: 102 ----TIKLWNVSSGQCLNTLQGHTDKIRSVVFSPDGQTFA-SGSDDQTVKRW--DVTTGQ 154

Query: 294 -TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L        S  ++PD   +V   D    + +   + +            +     
Sbjct: 155 CLNSLQGYRDGIWSIVFNPDGQTLVCCGD---DKTIKFWKVSTGQYLNSLHGHGSRIRSV 211

Query: 353 VWSPQGDLIA 362
           V+S  G  + 
Sbjct: 212 VFSHDGRTLV 221



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 75/223 (33%), Gaps = 14/223 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG   +++ + D                +    F+PN Q VA  + D      + L D 
Sbjct: 11  VSGSEDHTIKLWDVSNGRCLNTLQGHTDRIRSVIFNPNGQSVASGSDDH----TIKLWDV 66

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFI 303
              +    +   ++ + +  FS +G+  + S   ++ + ++  ++ S      L      
Sbjct: 67  YTGKCLNTLLGHKNWVWSISFSPDGQSIV-SASYNKTIKLW--NVSSGQCLNTLQGHTDK 123

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S  +SPD       SD    + +              Q      +  V++P G  +  
Sbjct: 124 IRSVVFSPDGQTFASGSD---DQTVKRWDVTTGQCLNSLQGYRDGIWSIVFNPDGQTLV- 179

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
                +      +   G     L    S +++  +S  GR+L+
Sbjct: 180 CCGDDKTIKFWKVST-GQYLNSLHGHGSRIRSVVFSHDGRTLV 221



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 62/191 (32%), Gaps = 16/191 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +   + D      + L D    R    +      I +  F+ NG+    S  
Sbjct: 2   AFSPDGKIIVSGSEDH----TIKLWDVSNGRCLNTLQGHTDRIRSVIFNPNGQSVA-SGS 56

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + ++  D+ +      L        S S+SPD   IV  S     + + +   +  
Sbjct: 57  DDHTIKLW--DVYTGKCLNTLLGHKNWVWSISFSPDGQSIVSASY---NKTIKLWNVSSG 111

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                 Q         V+SP G   A          +        Q    ++       +
Sbjct: 112 QCLNTLQGHTDKIRSVVFSPDGQTFASGSDDQT---VKRWDVTTGQCLNSLQGYRDGIWS 168

Query: 397 --WSPSGRSLI 405
             ++P G++L+
Sbjct: 169 IVFNPDGQTLV 179



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 60/182 (32%), Gaps = 17/182 (9%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK  ++S  +D  + ++ V         L        S  ++P+   +   SD  
Sbjct: 2   AFSPDGK-IIVSGSEDHTIKLWDVS-NGRCLNTLQGHTDRIRSVIFNPNGQSVASGSD-- 57

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + +               +   +   +SP G  I    ++     I +      Q 
Sbjct: 58  -DHTIKLWDVYTGKCLNTLLGHKNWVWSISFSPDGQSIVSASYNKT---IKLWNVSSGQC 113

Query: 384 RLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              ++      ++  +SP G++  F+   D  T  +    D+    + L +   Y  D  
Sbjct: 114 LNTLQGHTDKIRSVVFSPDGQT--FASGSDDQTVKRW---DVT-TGQCLNSLQGY-RDGI 166

Query: 442 WV 443
           W 
Sbjct: 167 WS 168


>gi|170102823|ref|XP_001882627.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642524|gb|EDR06780.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1051

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 68/196 (34%), Gaps = 18/196 (9%)

Query: 219 FSPNQQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           F+P   K++            +++   +   ++   ++      + +  FS +G+  + S
Sbjct: 777 FAPQSSKISLHFLKLFQKTLTVQIGQREHWSEKCFLKLVGHDDYVTSVAFSPDGRHIV-S 835

Query: 276 VQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              D+ + ++  D Q+  +    L        S ++SPD   IV  S     + + V  +
Sbjct: 836 GSCDKTVRVW--DAQTGQSVMDPLKGHDNYVTSVAFSPDGRHIVSGSC---DKTVRVWDA 890

Query: 334 NGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVED 389
                     +  +       +S  G  I           + V      Q     L V D
Sbjct: 891 QTGQSVMDPLKGHDDYVTSVAFSLDGRHIVSGSRDKT---VRVWDAQTGQSVMDPLKVLD 947

Query: 390 SNLQAPTWSPSGRSLI 405
           S + +  +SP GR ++
Sbjct: 948 SCVNSVAFSPDGRHIV 963



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 72/200 (36%), Gaps = 13/200 (6%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              D  +    FSP+ + +   + D    +RV+   T         G   + + +  FS +
Sbjct: 816  GHDDYVTSVAFSPDGRHIVSGSCD--KTVRVWDAQTGQSVMDPLKG-HDNYVTSVAFSPD 872

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKE 326
            G+  + S   D+ + ++  D Q+  +    L        S ++S D   IV  S R+   
Sbjct: 873  GRHIV-SGSCDKTVRVW--DAQTGQSVMDPLKGHDDYVTSVAFSLDGRHIVSGS-RDKTV 928

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +++  Q+  S    + +  ++      +SP G  I           + V     S + LL
Sbjct: 929  RVWDAQTGQSVMDPL-KVLDSCVNSVAFSPDGRHIVSGSDDPT---VRVWDACDSYDILL 984

Query: 387  VEDSNLQAPTWSPSGRSLIF 406
                  +     P    L++
Sbjct: 985  KFCHYDRNWIMLPDNAHLVW 1004



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 14/167 (8%)

Query: 172 DFNSRILFVSESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           D+ + + F  +    VSG    ++ V D + G ++       D  +    FSP+ + +  
Sbjct: 819 DYVTSVAFSPDGRHIVSGSCDKTVRVWDAQTGQSVMDPLKGHDNYVTSVAFSPDGRHIVS 878

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D    +RV+   T         G     + +  FS +G+  + S  +D+ + ++  D
Sbjct: 879 GSCD--KTVRVWDAQTGQSVMDPLKG-HDDYVTSVAFSLDGRHIV-SGSRDKTVRVW--D 932

Query: 289 LQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            Q+  +    L        S ++SPD   IV  SD      + V  +
Sbjct: 933 AQTGQSVMDPLKVLDSCVNSVAFSPDGRHIVSGSD---DPTVRVWDA 976


>gi|302346737|ref|YP_003815035.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           melaninogenica ATCC 25845]
 gi|302151142|gb|ADK97403.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           melaninogenica ATCC 25845]
          Length = 713

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 80/242 (33%), Gaps = 64/242 (26%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I A + S +GK+ +  V      +      +  +D        LT +      A++  
Sbjct: 42  GRIGAAQASPDGKKIVYQVGYYSVKENKGHQVLRVMDADGKNDRLLTTSAKSEGDAAWV- 100

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--------- 362
           D++ + F +      QL+ M ++G+++K+++   +       +SP    +          
Sbjct: 101 DNNTLAFLT----GGQLWTMNADGTNRKQLTH-SDIDIEGFRFSPDRKRVVLIKSIPYYG 155

Query: 363 ---------------------------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                                      +   +   F   V  +       ++E    ++P
Sbjct: 156 TIKQNPSDLPKATGMVITDMNYRHWDHYVTTNAHPFVADVTPEGIGAGIDVLEGEPYESP 215

Query: 396 ----------TWSPSGRSLIFS-RKKDGD-----TGSKLYSIDLNGRNETLINTPAYASD 439
                      WS   + + ++ RKK+G      T + +Y  ++  R    +  PA   +
Sbjct: 216 LAPFGGIEQIDWSKDSKFIAYTCRKKEGTQYAISTDADIYIYNVETRQTKNLCKPADYVE 275

Query: 440 PQ 441
           P+
Sbjct: 276 PK 277



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 113/358 (31%), Gaps = 86/358 (24%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +D     +            +V  + ++ +    L  M+ DG N + LT S   I    R
Sbjct: 79  ADGKNDRLLTTSAKSEGDAAWVDNNTLAFLTGGQLWTMNADGTNRKQLTHSDIDIEGF-R 137

Query: 219 FSPNQQKVA------YATYDDEDI---------------LRVYLMDTRIDRAPKRI---- 253
           FSP++++V       Y     ++                 R +      +  P       
Sbjct: 138 FSPDRKRVVLIKSIPYYGTIKQNPSDLPKATGMVITDMNYRHWDHYVTTNAHPFVADVTP 197

Query: 254 -----------GNFRSMILAP-------RFSSNGKRALISVQKDEAM--------DIYSV 287
                      G      LAP        +S + K    + +K E          DIY  
Sbjct: 198 EGIGAGIDVLEGEPYESPLAPFGGIEQIDWSKDSKFIAYTCRKKEGTQYAISTDADIYIY 257

Query: 288 DLQSNATERL-------------TNTL--------------FINISASYSPDSSQIVFES 320
           ++++  T+ L             T ++                +++  +SPD   I ++S
Sbjct: 258 NVETRQTKNLCKPADYVEPKIDATKSMRNQAVNHQAGDMNVGYDVNPKFSPDGKYIAWQS 317

Query: 321 -----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                    + +L V +     +  +++  +++  D  WS     + F         +  
Sbjct: 318 MKNDGYESDRNRLCVYELATGKKTYVAESFDSNVDDYTWSLNSKDLYFIGVWHATVNVYQ 377

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
               G + + L E  +    + S  G   + + ++     +++++I    + +  + T
Sbjct: 378 TNLKG-EVKQLTE-GDHNYVSISLLGDKKLLAIRQSISQANEIFAITPAKKEKASVQT 433



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 80/274 (29%), Gaps = 48/274 (17%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        L VMD DG N R LT S      +  +  +   +A+ T           
Sbjct: 63  YSVKENKGHQVLRVMDADGKNDRLLTTSAKS-EGDAAWV-DNNTLAFLTGGQ------LW 114

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTN 299
                    K++ +    I   RFS + KR ++  S+     +     DL       +T+
Sbjct: 115 TMNADGTNRKQLTHSDIDIEGFRFSPDRKRVVLIKSIPYYGTIKQNPSDLPKATGMVITD 174

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             + +     + ++    F +D   +     +     +                WS    
Sbjct: 175 MNYRHWDHYVTTNAHP--FVADVTPEGIGAGIDVLEGEPYESPLAPFGGIEQIDWSKDSK 232

Query: 360 LIAFT--KFSGEKF------AIGVMKKDGSQERLLVED---------------------- 389
            IA+T  K  G ++       I +   +  Q + L +                       
Sbjct: 233 FIAYTCRKKEGTQYAISTDADIYIYNVETRQTKNLCKPADYVEPKIDATKSMRNQAVNHQ 292

Query: 390 ------SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                      P +SP G+ + +   K+    S 
Sbjct: 293 AGDMNVGYDVNPKFSPDGKYIAWQSMKNDGYESD 326


>gi|157377336|ref|YP_001475936.1| peptidase S9 prolyl oligopeptidase [Shewanella sediminis HAW-EB3]
 gi|157319710|gb|ABV38808.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sediminis HAW-EB3]
          Length = 688

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 16/121 (13%)

Query: 258 SMILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSP 311
             + + + S +GK+A+    + +        D++ V+ ++  T RLT T     S  +S 
Sbjct: 43  GGMSSVQLSPDGKQAVWLETRWDKELDKSQRDLWQVNTKNKKTTRLTFTNESESSPQWSG 102

Query: 312 DSSQIVFE---------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           D   I +          +   GK Q++ +  +G D   ++++ E        SP G+ + 
Sbjct: 103 DGQYIYYIGKVTHEDKKAPYNGKSQVFRINRDGGDAVPVTKEVEG-VSSFSLSPDGNTLY 161

Query: 363 F 363
           F
Sbjct: 162 F 162



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 102/304 (33%), Gaps = 52/304 (17%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY------------ATYDDED 235
             K+ +  ++RDG +   +T   + +      SP+   + +            A+     
Sbjct: 123 NGKSQVFRINRDGGDAVPVTKEVEGVSSF-SLSPDGNTLYFLGSKTVKDKDEWASMRAGH 181

Query: 236 ILRVYLMDTRIDRA----------PKRIGNFRSMILAPRFSSNGKRAL-ISVQKD----- 279
               Y    R               + I +   ++     S +G +   I+   +     
Sbjct: 182 SAPKYAHGERKTNPLYKLDLQHFKQQLILDDDKVVWNFSVSDDGSKVARITTSDNELVNL 241

Query: 280 -EAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQIVFESDREGKE-QL 328
               DI   + +S + E L +T +   + S         +  D+ Q+ F  D +G   +L
Sbjct: 242 EGWSDIEIYNTRSKSNEVLEDTAWREQAPSPYGWLLGLDWHSDNQQLAFRIDFDGHPGKL 301

Query: 329 YVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIG---VMKKDGSQE 383
           +V  +       +++  +   +  D  W P  D + +      +  +    V        
Sbjct: 302 FVSNTKTKSLTEVTRIDDVTLNSSDIHWRPNSDELCYRGADHARVKLFCTEVEDGKQGDT 361

Query: 384 RLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN---ETLINTPAYASD 439
           R +V    +  + ++S +G+ L FS     D  S+++  D N +    + + N       
Sbjct: 362 RAVVNGDLVIGSYSFSHNGKKLAFSHN-GLDHFSEMFIADANSKRAKFKRITNINPQVD- 419

Query: 440 PQWV 443
             W+
Sbjct: 420 -SWI 422



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 83/267 (31%), Gaps = 56/267 (20%)

Query: 220 SPNQQKVAY--ATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ ++  +    +D E     R        ++   R+        +P++S +G+     
Sbjct: 51  SPDGKQAVWLETRWDKELDKSQRDLWQVNTKNKKTTRLTFTNESESSPQWSGDGQYIYYI 110

Query: 276 VQK---------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-------- 318
            +          +    ++ ++        +T  +    S S SPD + + F        
Sbjct: 111 GKVTHEDKKAPYNGKSQVFRINRDGGDAVPVTKEVEGVSSFSLSPDGNTLYFLGSKTVKD 170

Query: 319 ----ESDREGKEQ------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                S R G               LY +      Q+ I  D +  + +   S  G  +A
Sbjct: 171 KDEWASMRAGHSAPKYAHGERKTNPLYKLDLQHFKQQLILDDDKVVW-NFSVSDDGSKVA 229

Query: 363 FTKFSGEKF-------AIGVMKKDGSQERLLVEDSNLQ-APT---------WSPSGRSLI 405
               S  +         I +         +L + +  + AP+         W    + L 
Sbjct: 230 RITTSDNELVNLEGWSDIEIYNTRSKSNEVLEDTAWREQAPSPYGWLLGLDWHSDNQQLA 289

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLIN 432
           F    DG  G KL+  +   ++ T + 
Sbjct: 290 FRIDFDGHPG-KLFVSNTKTKSLTEVT 315



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 65/247 (26%), Gaps = 51/247 (20%)

Query: 211 DQILFEPRFSPNQQKVAY---ATYDDEDILR----VYLMDTRIDRAPKRIGNFRSMILAP 263
           ++    P++S + Q + Y    T++D+              R       +      + + 
Sbjct: 92  NESESSPQWSGDGQYIYYIGKVTHEDKKAPYNGKSQVFRINRDGGDAVPVTKEVEGVSSF 151

Query: 264 RFSSNGKRALISVQKDEAMD------------------------IYSVDLQSNATERLTN 299
             S +G        K                             +Y +DLQ    + + +
Sbjct: 152 SLSPDGNTLYFLGSKTVKDKDEWASMRAGHSAPKYAHGERKTNPLYKLDLQHFKQQLILD 211

Query: 300 TLFINISASYSPDSSQIV--FESDR-----EGKEQLYVMQSNGSDQKRI--------SQD 344
              +  + S S D S++     SD      EG   + +  +     + +        +  
Sbjct: 212 DDKVVWNFSVSDDGSKVARITTSDNELVNLEGWSDIEIYNTRSKSNEVLEDTAWREQAPS 271

Query: 345 KEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSP 399
                    W      +AF   F G    + V          +        N     W P
Sbjct: 272 PYGWLLGLDWHSDNQQLAFRIDFDGHPGKLFVSNTKTKSLTEVTRIDDVTLNSSDIHWRP 331

Query: 400 SGRSLIF 406
           +   L +
Sbjct: 332 NSDELCY 338



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/110 (12%), Positives = 36/110 (32%), Gaps = 17/110 (15%)

Query: 340 RISQDKE---ASYFDPVWSPQGDLIAFTKFS------GEKFAIGVMKKDGSQERLLVEDS 390
           +I+ D             SP G    + +          +  +  +     +   L   +
Sbjct: 33  QITTDDFFDIGGMSSVQLSPDGKQAVWLETRWDKELDKSQRDLWQVNTKNKKTTRLTFTN 92

Query: 391 NLQA-PTWSPSGRSLIFSRKKDG-------DTGSKLYSIDLNGRNETLIN 432
             ++ P WS  G+ + +  K          +  S+++ I+ +G +   + 
Sbjct: 93  ESESSPQWSGDGQYIYYIGKVTHEDKKAPYNGKSQVFRINRDGGDAVPVT 142


>gi|260060816|ref|YP_003193896.1| dipeptidyl aminopeptidase [Robiginitalea biformata HTCC2501]
 gi|88784946|gb|EAR16115.1| dipeptidyl aminopeptidase [Robiginitalea biformata HTCC2501]
          Length = 677

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 81/235 (34%), Gaps = 27/235 (11%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA-TYDDEDILRVYLMDTRID 247
            K    +MD  G N   L   R  +      SP+  K+A+  +  D   + +Y   T   
Sbjct: 150 RKGQPRIMDLSGENESPLFKVRGSVSGL-ALSPDGSKLAFVNSRGDHSFIGIYNFATEAF 208

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS------------VDLQSNATE 295
                  +  S    P +S +G++        E  +++              ++ S  T+
Sbjct: 209 HFQDPSIDRDSD---PVWSPDGQQLAFLRTPYEEPELFVPRRQGLPFSIRVTEVASGKTQ 265

Query: 296 RL------TNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            +      T ++F  +SAS   +    + ++F  +++G   LY + + G +  R+     
Sbjct: 266 TIFTADAGTGSVFQGVSASNQLFWTARNTLIFPWEKDGWRHLYELPAGGGEP-RLITPGA 324

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                   +     + F     ++    +   DG  ++L   +S    P     G
Sbjct: 325 GEVQYVSQNTDRGTLLFNSNQADRDRPHIYSYDGGLKQLTRGESLEWTPVMDGDG 379



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 13/171 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR------IGNFRSMILAPRFSS--NG 269
           RF P  + + +      +    Y     +   P++      + N     L+        G
Sbjct: 84  RFGPEGKTLWFVRGGSANRQGEYPNPVSMPDPPEQTIHKASLENSDIQALSEGHHPLLAG 143

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R +  ++K        +DL       L          + SPD S++ F + R     + 
Sbjct: 144 DRVIF-LRKG---QPRIMDLSGENESPLFKVRGSVSGLALSPDGSKLAFVNSRGDHSFIG 199

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +     ++             DPVWSP G  +AF +   E+  + V ++ G
Sbjct: 200 IYNFA-TEAFHFQDPSIDRDSDPVWSPDGQQLAFLRTPYEEPELFVPRRQG 249



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 37/98 (37%), Gaps = 6/98 (6%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +++F   R+G+ ++  M  +G ++  +      S      SP G  +AF    G+   
Sbjct: 143 GDRVIFL--RKGQPRI--MDLSGENESPL-FKVRGSVSGLALSPDGSKLAFVNSRGDHSF 197

Query: 373 IGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRK 409
           IG+                    P WSP G+ L F R 
Sbjct: 198 IGIYNFATEAFHFQDPSIDRDSDPVWSPDGQQLAFLRT 235



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 58/194 (29%), Gaps = 33/194 (17%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFE----SDRE 323
                  +   +IY          +LT     +        + P+   + F     ++R+
Sbjct: 44  VAWVENAEGVRNIYYARGLEYLPVQLTRYTADDGQELSQLRFGPEGKTLWFVRGGSANRQ 103

Query: 324 GK------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           G+            + ++      SD + +S+              GD + F +    K 
Sbjct: 104 GEYPNPVSMPDPPEQTIHKASLENSDIQALSEGHHPLLA-------GDRVIFLR----KG 152

Query: 372 AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
              +M   G  E  L +   ++     SP G  L F   +   +   +Y+      +   
Sbjct: 153 QPRIMDLSGENESPLFKVRGSVSGLALSPDGSKLAFVNSRGDHSFIGIYNFATEAFHFQD 212

Query: 431 INTPAYASDPQWVG 444
            +     SDP W  
Sbjct: 213 PSIDRD-SDPVWSP 225


>gi|325676288|ref|ZP_08155967.1| WD-40 repeat protein [Rhodococcus equi ATCC 33707]
 gi|325552849|gb|EGD22532.1| WD-40 repeat protein [Rhodococcus equi ATCC 33707]
          Length = 1008

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/317 (14%), Positives = 111/317 (35%), Gaps = 37/317 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKD-RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           G V+    D   V  R+WD+ D  + +   +  +       +AH++S            D
Sbjct: 499 GTVMATSSDDRTV--RVWDIADPARPVQVGRDLTGFDD---VAHSVS---------FSPD 544

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
             +      + ++      +L  + + GA ++    +    ++   F+ +   +A A++D
Sbjct: 545 GTTLAASSDDGMIRVFDATNLADIRQVGAPVQ----AHTGGIWTVAFAADGSTLASASWD 600

Query: 233 -DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
               +  V      +      +      + A   S +G   + +  +D  + ++++   +
Sbjct: 601 GTAKLWSVDPGTRAVHELRPALSGNGGGVPALALSPDGTTIV-TGGQDSIVRMWTLPAGT 659

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                +  +       S + D S++V  +  + + +L+ + + G   +  + +       
Sbjct: 660 -----VPVSDASMTLPSINSDGSRVV-TAGYDSQVRLWKVSAAGEMDRAGTIELPRPLGG 713

Query: 352 PVW---SPQGDLIAFTKFSGEKFAIGVM----KKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                 SP G ++A T+ SG    +  +            +           +SP GR+L
Sbjct: 714 GNVVELSPDGKVLATTQTSGGHVQLWDVADPEHPAALGAPITTATRFTWEMAFSPDGRTL 773

Query: 405 IFSRKKDGDTGSKLYSI 421
                 D D    L+ +
Sbjct: 774 AIG---DDDFSVALWDV 787



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 53/164 (32%), Gaps = 13/164 (7%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A+      D     L+ T      + +      +    FS++G+    +   D ++ ++ 
Sbjct: 320 AWRMRPGSDDAFSRLVATETTPISRSLTGHTGPVYGVAFSADGRTLA-TASDDRSVRLWD 378

Query: 287 VDLQSNATER----LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +    +   +    LT       S S+SPD   +       G   +++         R  
Sbjct: 379 L-ADGSVPVQIGQELTGPDQYMASVSFSPDGHLLAAG---GGDGTMWIWDIGDRSAPRAL 434

Query: 343 ----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               ++   +  +  +SP G L+A     G        K D  +
Sbjct: 435 MSGQRNAPGAVHNVRFSPDGRLLAVPHDDGTVTLFDTTKPDSGE 478



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 71/224 (31%), Gaps = 19/224 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A    D    L          R  +R+   R+++ +  F  +G   L++  
Sbjct: 765 AFSPDGRTLAIGDDDFSVALWDVQDPRNPVRLGERLTGPRNLVRSVAFGPDGD-VLVASS 823

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D  +  + V                +      S+ PD   +V  SD +    L+    +
Sbjct: 824 ADGDIYAWDVSTPEKPASLPVRAGGHDGGVNAVSFGPDGDTLVTASD-DHTLVLWDRDDD 882

Query: 335 GSDQKR--ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER------LL 386
           G    R    +    + +   +   G  +      G    + +   DG+ E       L 
Sbjct: 883 GGFTPRPVPLRGHTGTVYSVAFGGDGTHVVSGSDDGS---VRLWNVDGAGEAEEVGGPLT 939

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
              +      + P   ++I      GD   + + +D +     +
Sbjct: 940 TIGTGRWQVAFLPRTDTVI---AGGGDGVLRTWRLDEDPITARI 980



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 65/214 (30%), Gaps = 13/214 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  ++   FS + + +A A+ D    L      +   +  + +      + +  FS
Sbjct: 346 LTGHTGPVYGVAFSADGRTLATASDDRSVRLWDLADGSVPVQIGQELTGPDQYMASVSFS 405

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESD 321
            +G     +   D  M I+  D+   +  R       N      +  +SPD   +    D
Sbjct: 406 PDGHLLA-AGGGDGTMWIW--DIGDRSAPRALMSGQRNAPGAVHNVRFSPDGRLLAVPHD 462

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                     + +  +    +  +  S      S +G  +  T        +  +     
Sbjct: 463 DGTVTLFDTTKPDSGEFPAFT-LRAHSGAVRTVSFRGGTVMATSSDDRTVRVWDIADPAR 521

Query: 382 QERL---LVE-DSNLQAPTWSPSGRSLIFSRKKD 411
             ++   L   D    + ++SP G +L  S    
Sbjct: 522 PVQVGRDLTGFDDVAHSVSFSPDGTTLAASSDDG 555



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 105/360 (29%), Gaps = 50/360 (13%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDR-------KQIIGKKFFSSPASWRKIAHTIS 159
           G      GR +    D   V  RLWD+ D        +++ G   + +  S+    H ++
Sbjct: 355 GVAFSADGRTLATASDDRSV--RLWDLADGSVPVQIGQELTGPDQYMASVSFSPDGHLLA 412

Query: 160 D----------DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
                      DI             R    +   V       L  +  D   +     +
Sbjct: 413 AGGGDGTMWIWDIGDRSAPRALMSGQRNAPGAVHNVRFSPDGRLLAVPHDDGTVTLFDTT 472

Query: 210 RDQILFEPRF-----SPNQQKVAY----ATYDDEDILRVYLMDTRIDRAP----KRIGNF 256
           +      P F     S   + V++          D   V + D      P    + +  F
Sbjct: 473 KPDSGEFPAFTLRAHSGAVRTVSFRGGTVMATSSDDRTVRVWDIADPARPVQVGRDLTGF 532

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS----NATERLTNTLFINISASYSPD 312
             +  +  FS +G     S          + +L       A  +         + +++ D
Sbjct: 533 DDVAHSVSFSPDGTTLAASSDDGMIRVFDATNLADIRQVGAPVQ--AHTGGIWTVAFAAD 590

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---VWSPQGDLIAFTKFSGE 369
            S +   S  +G  +L+ +         +      +         SP G  I  T     
Sbjct: 591 GSTLASAS-WDGTAKLWSVDPGTRAVHELRPALSGNGGGVPALALSPDGTTIV-TGGQDS 648

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              +  +        + V D+++  P+ +  G  ++ +     D+  +L+ +   G  + 
Sbjct: 649 IVRMWTLPAGT----VPVSDASMTLPSINSDGSRVVTAGY---DSQVRLWKVSAAGEMDR 701



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 60/184 (32%), Gaps = 22/184 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQI--IGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           GR +  G D   V   LWDV+D +    +G++        R +A     D+   +     
Sbjct: 770 GRTLAIGDDDFSVA--LWDVQDPRNPVRLGERLTGPRNLVRSVAFGPDGDV---LVASSA 824

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           D +     VS       +                     D  +    F P+   +  A+ 
Sbjct: 825 DGDIYAWDVSTPEKPASLPVR--------------AGGHDGGVNAVSFGPDGDTLVTASD 870

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D   +L     D      P  +      + +  F  +G   ++S   D ++ +++VD   
Sbjct: 871 DHTLVLWDRDDDGGFTPRPVPLRGHTGTVYSVAFGGDGTH-VVSGSDDGSVRLWNVDGAG 929

Query: 292 NATE 295
            A E
Sbjct: 930 EAEE 933


>gi|238618990|ref|YP_002913815.1| peptidase S41 [Sulfolobus islandicus M.16.4]
 gi|238380059|gb|ACR41147.1| peptidase S41 [Sulfolobus islandicus M.16.4]
          Length = 1008

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 4/116 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +++  ++   K +L+V + +  + + I + +     +  W P G+  A+    G 
Sbjct: 368 SPDGKKVLLSNN---KLELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGY 424

Query: 370 -KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +I + + DG   R+        +P++ P GR L F   +  D  +     +L+
Sbjct: 425 YTQSIKLARIDGKIVRITTPYGYDFSPSFDPDGRYLYFLAARHLDPTNDKVIFNLS 480



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 55/145 (37%), Gaps = 6/145 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
              +  V+     + L ++ +DG N + +     +I    + SP+ +KV  +     + L
Sbjct: 328 ALPNGDVIGVNDDDKLVILGKDG-NEKVINRDFARIERV-KVSPDGKKVLLS----NNKL 381

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ +   D A     +   +IL   +  NG+    +  +        +        R+
Sbjct: 382 ELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGYYTQSIKLARIDGKIVRI 441

Query: 298 TNTLFINISASYSPDSSQIVFESDR 322
           T     + S S+ PD   + F + R
Sbjct: 442 TTPYGYDFSPSFDPDGRYLYFLAAR 466



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 66/221 (29%), Gaps = 63/221 (28%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDR 322
            +  G     +   D    ++ + L+     R+T+ L ++I    SP   ++ F     +
Sbjct: 8   PDIRGDLISFTSDDD----VWLLSLKDMKPLRITSGLGVSIRPKISPSGRKVAFTVVWLK 63

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVM 376
            GK+   +        +R++     +     W  + ++I  T F        E + + V 
Sbjct: 64  SGKQGGDIYVVEDGQARRVTYFGSRNSRVANWLSEDEIIVITDFHTPFGQWNEAYKVDVN 123

Query: 377 KKDGSQE-------------RLLVEDSNLQAPTW-------------SPSGRS------- 403
             +  +               +++       P W             S  G         
Sbjct: 124 NGETEKLPFGMLSNIVKRDNVIVIARGYQDLPNWKGYKGGTKGELWISRDGGKTFEKFVS 183

Query: 404 --------------LIFSRKKDGDTGSKLYSIDLNGRNETL 430
                         + F    +G     LYS+DLNG++   
Sbjct: 184 LDGNVSWPMIVKERVYFLSDHEG--VGNLYSVDLNGKDLRR 222



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 66/225 (29%), Gaps = 59/225 (26%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FS 266
            S   +   P+ SP+ +KVA+     +   +   +    D   +R+  F S       + 
Sbjct: 37  TSGLGVSIRPKISPSGRKVAFTVVWLKSGKQGGDIYVVEDGQARRVTYFGSRNSRVANWL 96

Query: 267 SNGKRALIS---VQKDEAMDIYSVDLQSNATERLTNT---------------LFINISAS 308
           S  +  +I+       +  + Y VD+ +  TE+L                         +
Sbjct: 97  SEDEIIVITDFHTPFGQWNEAYKVDVNNGETEKLPFGMLSNIVKRDNVIVIARGYQDLPN 156

Query: 309 Y-------------SPDSSQ---------------------IVFESDREGKEQLYVMQSN 334
           +             S D  +                     + F SD EG   LY +  N
Sbjct: 157 WKGYKGGTKGELWISRDGGKTFEKFVSLDGNVSWPMIVKERVYFLSDHEGVGNLYSVDLN 216

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           G D +R        Y+    +  G  I F         I +   +
Sbjct: 217 GKDLRR--HTNFTDYYCRNANSDGKRIVFQNAGD----IYLYDPE 255



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 97/263 (36%), Gaps = 36/263 (13%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G  K  L +  RDG        S D  +  P     +    Y   D E +  +Y +
Sbjct: 158 KGYKGGTKGELWIS-RDGGKTFEKFVSLDGNVSWPMIVKER---VYFLSDHEGVGNLYSV 213

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    +  +R  NF         S +GKR +       A DIY  D + ++  +L   L 
Sbjct: 214 DLN-GKDLRRHTNFTDYYCRNANS-DGKRIVFQ----NAGDIYLYDPEKDSLSKLDIDLP 267

Query: 303 INI---SASYSP----------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +       +            + + +   S    + + ++M+       ++ + +   Y
Sbjct: 268 TDRKKRQPKFVSVIEYMNEAVVNGNYVALTS----RGKAFLMRPWDGPAVQLGKKQGVKY 323

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                 P GD+I       +   + ++ KDG+++ +  + + ++    SP G+ ++ S  
Sbjct: 324 RQIQALPNGDVIGV----NDDDKLVILGKDGNEKVINRDFARIERVKVSPDGKKVLLSNN 379

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           K      +L+  +++  N  LI+
Sbjct: 380 K-----LELWVYEIDSDNARLID 397



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDR 322
            S +GK+ L+S  K   ++++  ++ S+   RL +    ++     + P+     +    
Sbjct: 367 VSPDGKKVLLSNNK---LELWVYEIDSDNA-RLIDKSEYDLILEFDWHPNGEWFAYAFPE 422

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               Q   +        RI+       F P + P G  + F
Sbjct: 423 GYYTQSIKLARIDGKIVRITT-PYGYDFSPSFDPDGRYLYF 462


>gi|307103884|gb|EFN52141.1| hypothetical protein CHLNCDRAFT_56325 [Chlorella variabilis]
          Length = 448

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 74/194 (38%), Gaps = 16/194 (8%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRAL 273
           +P FSP+++ +A            Y +  R   +   +G  +    I +  +S +G   L
Sbjct: 13  QPTFSPDRKLLA--------SAEGYRLVVRAADSLAVVGLCSCLDRIESISWSPDGDHIL 64

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             + K   + ++ V    +    +       ++A ++PD   I+  +D     +L V   
Sbjct: 65  CGLFKRATVQVFCVS-DPDWACSIAEGPAGIVAARWTPDGQHILLTADFG--VRLSVWSL 121

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSN 391
                  + +  + ++    +SP G L+A    S  K ++ +      Q R+      ++
Sbjct: 122 VDQSCVNL-RGPKHAHAGLAFSPDGTLLAVAHRSDCKDSLAMYDCTTWQPRVQFAAGTTD 180

Query: 392 LQAPTWSPSGRSLI 405
           L    WSP G  + 
Sbjct: 181 LADLAWSPDGGCIA 194



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 75/206 (36%), Gaps = 8/206 (3%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+   +          ++V+ +          I    + I+A R++ +G+  L++  
Sbjct: 55  SWSPDGDHIL-CGLFKRATVQVFCVSDPDWACS--IAEGPAGIVAARWTPDGQHILLTAD 111

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               + ++S  L   +   L      +   ++SPD + +      + K+ L +       
Sbjct: 112 FGVRLSVWS--LVDQSCVNLRGPKHAHAGLAFSPDGTLLAVAHRSDCKDSLAMYDCTTWQ 169

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQA 394
            +           D  WSP G  IA  + +     + V   +G   +      +   ++A
Sbjct: 170 PRVQFAAGTTDLADLAWSPDGGCIACWESALYGHQLAVFTPEGECLTAYSAYKDLLGIKA 229

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +WSPSG+ L     + G T     +
Sbjct: 230 VSWSPSGQLLALGDYEQGATVLNHVT 255



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 9/183 (4%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS + ++ L S +      +      S A   L + L    S S+SPD   I+    +
Sbjct: 14  PTFSPD-RKLLASAE---GYRLVVRAADSLAVVGLCSCLDRIESISWSPDGDHILCGLFK 69

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-VMKKDGS 381
               Q++ +     D      +  A      W+P G  I  T   G + ++  ++ +   
Sbjct: 70  RATVQVFCVSDP--DWACSIAEGPAGIVAARWTPDGQHILLTADFGVRLSVWSLVDQSCV 127

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             R            +SP G  L  + + D      +Y                  +D  
Sbjct: 128 NLRGPKH--AHAGLAFSPDGTLLAVAHRSDCKDSLAMYDCTTWQPRVQFAAGTTDLADLA 185

Query: 442 WVG 444
           W  
Sbjct: 186 WSP 188


>gi|82524121|emb|CAJ19150.1| hypothetical protein [unidentified microorganism]
          Length = 484

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 73/247 (29%), Gaps = 46/247 (18%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK--GDFNSRILFVSESVVSGII--- 189
               I+ +       + R     IS  +Y  I      G F++ ++  +           
Sbjct: 193 GGGAILNRGGTLRKLTLRDST-MISSTVYGEIHPAGRFGVFSTNVIIPAMHPFGNRRMEV 251

Query: 190 ---KNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
               + LCV D DG  +     T   D     P FS +   V Y       +    +  T
Sbjct: 252 YDTASDLCVADFDGNRMTTFPETARPDVFETFPVFSADGNWVYYCAAPARKLP-AEVEQT 310

Query: 245 RIDRAPKRIGNFRSMILAPR---FS--------------SNGKRALISVQKDEAM----- 282
                 +        +  P    +S               +G+  L +V           
Sbjct: 311 MYSLVRRPFDAETGTLGGPADTLWSATERGLSVCHPKASPDGRWLLFTVADYGTFPINHR 370

Query: 283 --DIYSVDLQSNATERLT----NTLFINISASYSPDSSQIVFESDRE----GKEQLYVMQ 332
             D+  +DL++     LT    N    +   S+S D+   VF S R     GK     + 
Sbjct: 371 ECDLRMLDLRTGDV--LTLDEVNADKSDTYHSWSSDARWFVFASKRGDGMFGKPWFSHVS 428

Query: 333 SNGSDQK 339
            +G   +
Sbjct: 429 EDGRVTR 435



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 68/215 (31%), Gaps = 34/215 (15%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISAS 308
           R G F + ++ P     G R       D A D+   D   N       T   +       
Sbjct: 228 RFGVFSTNVIIPAMHPFGNRR--MEVYDTASDLCVADFDGNRMTTFPETARPDVFETFPV 285

Query: 309 YSPDSSQIVFESDREGK------EQLYVMQSNGSDQKRISQDKEASYFD----------- 351
           +S D + + + +    K      + +Y +     D +  +    A               
Sbjct: 286 FSADGNWVYYCAAPARKLPAEVEQTMYSLVRRPFDAETGTLGGPADTLWSATERGLSVCH 345

Query: 352 PVWSPQGDLIAFTKFSGEKFAI-------GVMKKDGSQERLLVEDSNLQAP---TWSPSG 401
           P  SP G  + FT      F I        ++         L E +  ++    +WS   
Sbjct: 346 PKASPDGRWLLFTVADYGTFPINHRECDLRMLDLRTGDVLTLDEVNADKSDTYHSWSSDA 405

Query: 402 RSLIFSRKK-DGDTGSKLYS-IDLNGRNETLINTP 434
           R  +F+ K+ DG  G   +S +  +GR       P
Sbjct: 406 RWFVFASKRGDGMFGKPWFSHVSEDGRVTRPFLLP 440


>gi|315607861|ref|ZP_07882854.1| dipeptidyl peptidase IV [Prevotella buccae ATCC 33574]
 gi|315250330|gb|EFU30326.1| dipeptidyl peptidase IV [Prevotella buccae ATCC 33574]
          Length = 736

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 103/294 (35%), Gaps = 24/294 (8%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN----IRYLTPSRDQILFE 216
           DI  ++  E    +    +V ++ +       +  +  DG++     + +      I   
Sbjct: 140 DIGTNMVAEWNPASQTTAYVKDNQLYVKDGKEVVQLTTDGSSDIVYGQSVHRDEFGINGG 199

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ QK+A+   D   +    L+    +      G  R     P          ++ 
Sbjct: 200 LFWSPDGQKLAFYRMDQSMVSTFPLVTMPENDWVPTEGQSRIATPEPIRYP------MAG 253

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIV-FESDREGKE-QLYVM 331
           +    + +   DL++  T  L +    +    + S++PDS  I  FE +R+  + +L   
Sbjct: 254 ETSHKVTVGVYDLKNKKTVYLKSGDPTDRYFTNISWNPDSKTIYMFELNRDQNDCRLVSY 313

Query: 332 QSNGSDQ-KRISQDKEASYFDP----VWSP-QGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            +   D+   I ++ +A Y +P    V+ P                 + +    G + R 
Sbjct: 314 NAETGDKITEIYRETDAKYVEPLHPIVFLPWDKSRFVMQSQRDGYNHLYLYNIKGEKIRQ 373

Query: 386 LVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAY 436
           L     +      +    +++I+   +        + +D+  G+   L N   +
Sbjct: 374 LTSGKWVVLDLVGFDAKHKAVIYQSNECSPIQKNTWRVDVQTGKRALLDNGKGW 427



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 69/222 (31%), Gaps = 34/222 (15%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-----PRFSSNGKRALISVQKDEAMDIY 285
           +D +    V+L D   +   +   N  S   A       +  +GK  ++ +  D + DI 
Sbjct: 128 FDFKKKKIVWLQDIGTNMVAEW--NPASQTTAYVKDNQLYVKDGKE-VVQLTTDGSSDI- 183

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
              +   +  R  +   IN    +SPD  ++ F          Y M  +      +    
Sbjct: 184 ---VYGQSVHR--DEFGINGGLFWSPDGQKLAF----------YRMDQSMVSTFPLVTMP 228

Query: 346 EASYF-----DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPT 396
           E  +        + +P+         +  K  +GV      +   L      D      +
Sbjct: 229 ENDWVPTEGQSRIATPEPIRYPMAGETSHKVTVGVYDLKNKKTVYLKSGDPTDRYFTNIS 288

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYA 437
           W+P  +++            +L S +   G   T I     A
Sbjct: 289 WNPDSKTIYMFELNRDQNDCRLVSYNAETGDKITEIYRETDA 330


>gi|227826854|ref|YP_002828633.1| peptidase S41 [Sulfolobus islandicus M.14.25]
 gi|227458649|gb|ACP37335.1| peptidase S41 [Sulfolobus islandicus M.14.25]
          Length = 1008

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 4/116 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +++  ++   K +L+V + +  + + I + +     +  W P G+  A+    G 
Sbjct: 368 SPDGKKVLLSNN---KLELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGY 424

Query: 370 -KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +I + + DG   R+        +P++ P GR L F   +  D  +     +L+
Sbjct: 425 YTQSIKLARIDGKIVRITTPYGYDFSPSFDPDGRYLYFLAARHLDPTNDKVIFNLS 480



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 37/105 (35%), Gaps = 4/105 (3%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  L V + D  N R +  S   ++ E  + PN +  AYA    E      +   RID
Sbjct: 378 NNKLELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAF--PEGYYTQSIKLARID 435

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQ 290
               RI        +P F  +G+       +  D   D    +L 
Sbjct: 436 GKIVRITTPYGYDFSPSFDPDGRYLYFLAARHLDPTNDKVIFNLS 480



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 66/221 (29%), Gaps = 63/221 (28%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDR 322
            +  G     +   D    ++ + L+     R+T+ L ++I    SP   ++ F     +
Sbjct: 8   PDIRGDLISFTSDDD----VWLLSLKDMKPLRITSGLGVSIRPKISPSGRKVAFTVVWLK 63

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVM 376
            GK+   +        +R++     +     W  + ++I  T F        E + + V 
Sbjct: 64  SGKQGGDIYVVEDGQARRVTYFGSRNSRVANWLSEDEIIVITDFHTPFGQWNEAYKVDVN 123

Query: 377 KKDGSQE-------------RLLVEDSNLQAPTW-------------SPSGRS------- 403
             +  +               +++       P W             S  G         
Sbjct: 124 NGETEKLPFGMLSNIVKRDNVIVIARGYQDLPNWKGYKGGTKGELWISRDGGKTFEKFVS 183

Query: 404 --------------LIFSRKKDGDTGSKLYSIDLNGRNETL 430
                         + F    +G     LYS+DLNG++   
Sbjct: 184 LDGNVSWPMIVKERVYFLSDHEG--VGNLYSVDLNGKDLRR 222



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 55/145 (37%), Gaps = 6/145 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
              +  V+     + L ++ ++G N + +     +I    + SP+ +KV  +     + L
Sbjct: 328 ALPNGDVIGVNDDDKLVILGKNG-NEKVINRDFARIERV-KVSPDGKKVLLS----NNKL 381

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ +   D A     +   +IL   +  NG+    +  +        +        R+
Sbjct: 382 ELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGYYTQSIKLARIDGKIVRI 441

Query: 298 TNTLFINISASYSPDSSQIVFESDR 322
           T     + S S+ PD   + F + R
Sbjct: 442 TTPYGYDFSPSFDPDGRYLYFLAAR 466



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 66/225 (29%), Gaps = 59/225 (26%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FS 266
            S   +   P+ SP+ +KVA+     +   +   +    D   +R+  F S       + 
Sbjct: 37  TSGLGVSIRPKISPSGRKVAFTVVWLKSGKQGGDIYVVEDGQARRVTYFGSRNSRVANWL 96

Query: 267 SNGKRALIS---VQKDEAMDIYSVDLQSNATERLTNT---------------LFINISAS 308
           S  +  +I+       +  + Y VD+ +  TE+L                         +
Sbjct: 97  SEDEIIVITDFHTPFGQWNEAYKVDVNNGETEKLPFGMLSNIVKRDNVIVIARGYQDLPN 156

Query: 309 Y-------------SPDSSQ---------------------IVFESDREGKEQLYVMQSN 334
           +             S D  +                     + F SD EG   LY +  N
Sbjct: 157 WKGYKGGTKGELWISRDGGKTFEKFVSLDGNVSWPMIVKERVYFLSDHEGVGNLYSVDLN 216

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           G D +R        ++    +  G  I F         I +   +
Sbjct: 217 GKDLRR--HTNFTDFYCRNANSDGKRIVFQNAGD----IYLYDPE 255



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 97/263 (36%), Gaps = 36/263 (13%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G  K  L +  RDG        S D  +  P     +    Y   D E +  +Y +
Sbjct: 158 KGYKGGTKGELWIS-RDGGKTFEKFVSLDGNVSWPMIVKER---VYFLSDHEGVGNLYSV 213

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    +  +R  NF         S +GKR +       A DIY  D + ++  +L   L 
Sbjct: 214 DLN-GKDLRRHTNFTDFYCRNANS-DGKRIVFQ----NAGDIYLYDPEKDSLSKLDIDLP 267

Query: 303 INI---SASYSP----------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +       +            + + I   S    + + ++M+       ++ + +   Y
Sbjct: 268 TDRKKRQPKFVSVIEYMNEAVVNGNYIALTS----RGKAFLMRPWDGPAVQLGKKQGVKY 323

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                 P GD+I       +   + ++ K+G+++ +  + + ++    SP G+ ++ S  
Sbjct: 324 RQIQALPNGDVIGV----NDDDKLVILGKNGNEKVINRDFARIERVKVSPDGKKVLLSNN 379

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           K      +L+  +++  N  LI+
Sbjct: 380 K-----LELWVYEIDSDNARLID 397



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDR 322
            S +GK+ L+S  K   ++++  ++ S+   RL +    ++     + P+     +    
Sbjct: 367 VSPDGKKVLLSNNK---LELWVYEIDSDNA-RLIDKSEYDLILEFDWHPNGEWFAYAFPE 422

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               Q   +        RI+       F P + P G  + F
Sbjct: 423 GYYTQSIKLARIDGKIVRITT-PYGYDFSPSFDPDGRYLYF 462


>gi|307151448|ref|YP_003886832.1| Serine/threonine-protein kinase-like domain-containing protein
           [Cyanothece sp. PCC 7822]
 gi|306981676|gb|ADN13557.1| Serine/threonine-protein kinase-like domain protein [Cyanothece sp.
           PCC 7822]
          Length = 930

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 87/262 (33%), Gaps = 31/262 (11%)

Query: 113 TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
              +      +  +        R+WDV   K +   +   +      +  +++    +  
Sbjct: 687 VSSIAFSADGKFLISGSWDQTVRMWDVVTGKPLRFWQGHQN------LIKSVAVSSNKR- 739

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
               G ++  +     S           +       +R L     ++     FS +   V
Sbjct: 740 FIASGSWDKTVRICDLSTP--------WLPLTTSKGVRVLYGHSGEVECV-AFSHDSTLV 790

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A  ++D      V + +    +  +++    S +L   FS +G+  + S  +D+ + ++ 
Sbjct: 791 ASGSWDQ----TVRVWEVSSTQEVQKLEGHSSPVLCVAFSPDGQYLV-SGGRDQILLLWD 845

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V ++   T++L        S ++SPD   IV  S     + + +  +      ++     
Sbjct: 846 V-MKGEWTKKLKGHTHYVNSVAFSPDGKLIVSGSH---DQTVRLWDAASGSLIQVLYGHT 901

Query: 347 ASYFDPVWSPQGDLIAFTKFSG 368
                  +S  G  +A     G
Sbjct: 902 NYVKSVAFSGDGTFVASADNDG 923



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 99/291 (34%), Gaps = 38/291 (13%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                   R+WD+++  +I            +K  HT  + +Y       G    R++  
Sbjct: 617 SGSYDYTLRVWDLREGWEI---------KQLKK--HT--NWVYCVACSPDG----RLIAC 659

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 G   + + V D                +    FS + + +   ++D      V 
Sbjct: 660 ------GGSDHLIHVWDSVQNREVICLNGHTDPVSSIAFSADGKFLISGSWDQ----TVR 709

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-----SVDLQSNATE 295
           + D    +  +     +++I +   SSN +    S   D+ + I       + L ++   
Sbjct: 710 MWDVVTGKPLRFWQGHQNLIKSVAVSSNKRFIA-SGSWDKTVRICDLSTPWLPLTTSKGV 768

Query: 296 RLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           R+       +   ++S DS+ +   S     + + V + + + + +  +   +      +
Sbjct: 769 RVLYGHSGEVECVAFSHDSTLVASGS---WDQTVRVWEVSSTQEVQKLEGHSSPVLCVAF 825

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           SP G  +             VMK +   ++L      + +  +SP G+ ++
Sbjct: 826 SPDGQYLVSGGRDQILLLWDVMKGE-WTKKLKGHTHYVNSVAFSPDGKLIV 875



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 71/190 (37%), Gaps = 19/190 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  ++A     +     +Y+ D       +R+      I    FS++G + L+S   D
Sbjct: 398 SPDVTRLALVFQQE-----IYIWDLETATVVQRLKGHLKEINDLVFSADG-QLLVSASND 451

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           E + ++ V+        L       I  S+S D S I   S R+   +++    +    +
Sbjct: 452 ETLIVWDVN-SGKIIAHLYGHRGAVICVSFSADGSLIASGS-RDESVRVW----DSYSYQ 505

Query: 340 RISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--AP 395
            ++  +EA+       +S     IA          I + + +  Q     E       + 
Sbjct: 506 ELTVLQEANLGVESVAFSLDSLWIAAGSRD---HKIRLWEIESRQIVAQFEAHQDWITSI 562

Query: 396 TWSPSGRSLI 405
           T+SP G+ L 
Sbjct: 563 TFSPDGQFLA 572



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 80/262 (30%), Gaps = 56/262 (21%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  + + D + A +        + + +  FS + Q +  A+ D+     + + D    +
Sbjct: 408 FQQEIYIWDLETATVVQRLKGHLKEINDLVFSADGQLLVSASNDE----TLIVWDVNSGK 463

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY----------------------- 285
               +   R  ++   FS++G     S  +DE++ ++                       
Sbjct: 464 IIAHLYGHRGAVICVSFSADGSLIA-SGSRDESVRVWDSYSYQELTVLQEANLGVESVAF 522

Query: 286 SVD-----------------LQSNATE-RLTNTLFINISASYSPDSSQIVFESDREG--K 325
           S+D                 ++S     +         S ++SPD     F +   G   
Sbjct: 523 SLDSLWIAAGSRDHKIRLWEIESRQIVAQFEAHQDWITSITFSPDGQ---FLAGAGGIED 579

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQER 384
           + + V            +    +      S     +    +    + + V    +G + +
Sbjct: 580 KTIRVWNLASKKNIWELKGHWNTVNTIAISSDSRYLISGSYD---YTLRVWDLREGWEIK 636

Query: 385 LLVEDSNLQAPTW-SPSGRSLI 405
            L + +N       SP GR + 
Sbjct: 637 QLKKHTNWVYCVACSPDGRLIA 658



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 52/345 (15%), Positives = 110/345 (31%), Gaps = 44/345 (12%)

Query: 119 EGKDRLRVE------FRLWDVKDRKQIIGK----------KFFSS----PASWRKIAHTI 158
               +L V         +WDV   K I              F +      +  R  +  +
Sbjct: 439 SADGQLLVSASNDETLIVWDVNSGKIIAHLYGHRGAVICVSFSADGSLIASGSRDESVRV 498

Query: 159 SD-DIYQSIT--GEKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            D   YQ +T   E       + F  +S  + +G   + + + + +   I     +    
Sbjct: 499 WDSYSYQELTVLQEANLGVESVAFSLDSLWIAAGSRDHKIRLWEIESRQIVAQFEAHQDW 558

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +    FSP+ Q +A A   ++  +RV+  +    +    +    + +     SS+ +   
Sbjct: 559 ITSITFSPDGQFLAGAGGIEDKTIRVW--NLASKKNIWELKGHWNTVNTIAISSDSRYL- 615

Query: 274 ISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           IS   D  + ++  DL+     ++L          + SPD   I       G + L  + 
Sbjct: 616 ISGSYDYTLRVW--DLREGWEIKQLKKHTNWVYCVACSPDGRLIAC----GGSDHLIHVW 669

Query: 333 SNGSDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDS 390
            +  +++ I  +          +S  G  +    +        V+   G   R      +
Sbjct: 670 DSVQNREVICLNGHTDPVSSIAFSADGKFLISGSWDQTVRMWDVV--TGKPLRFWQGHQN 727

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +++   S + R +       G     +   DL+     L  +  
Sbjct: 728 LIKSVAVSSNKRFIA-----SGSWDKTVRICDLSTPWLPLTTSKG 767


>gi|149277182|ref|ZP_01883324.1| peptidase S9B, dipeptidylpeptidase IV domain protein [Pedobacter
           sp. BAL39]
 gi|149232059|gb|EDM37436.1| peptidase S9B, dipeptidylpeptidase IV domain protein [Pedobacter
           sp. BAL39]
          Length = 706

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 72/215 (33%), Gaps = 39/215 (18%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---------- 299
           P+++ N +     P  S +GK    +   D    +++VDL +    R T+          
Sbjct: 103 PRQLTNSKEQEKNPTLSPDGKYVAFTRDND----LFTVDLTTGKELRYTSDGTDVIYNGW 158

Query: 300 ----------TLFINISASYS-PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                         N  A +  PDS  I F    + K  ++ +  +        + +   
Sbjct: 159 SSWVYYEEILGRSTNYKAFWWAPDSKHIAFMRFDDTKVPMFPINGSTGQHGYTEKTRYPK 218

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             DP  +P+   + F   +G         +         +D     P WS  G SL+   
Sbjct: 219 AGDP--NPE-VKVGFVPVTGGDVVWAAFNEK--------DDQYFGTPYWSYDGSSLMVQW 267

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              G    K Y++D N  ++  I     +S   WV
Sbjct: 268 MNRGQDNLKFYAVDPNTGSKKEIYNEQQSS---WV 299



 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 52/381 (13%), Positives = 111/381 (29%), Gaps = 68/381 (17%)

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSP----ASWRKIAHTI----SDDIYQSITGEKGDFN 174
            + V  +L  +  ++   G    + P      WR   H I    S+    ++    G+  
Sbjct: 16  NMTVSAQLKRLNQQQTFKGVPSITRPMSNIYGWRDDNHYIEMNESNRSLYAVNVLTGEKA 75

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---- 230
                   +V   IIK+ + +    G        +  +    P  SP+ + VA+      
Sbjct: 76  PYTPPPKSNVDVSIIKDDVYIQY--GKEEPRQLTNSKEQEKNPTLSPDGKYVAFTRDNDL 133

Query: 231 -----------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                          D   V           + I    +   A  ++ + K        D
Sbjct: 134 FTVDLTTGKELRYTSDGTDVIYNGWSSWVYYEEILGRSTNYKAFWWAPDSKHIAFMRFDD 193

Query: 280 EAMDIYSVDLQSNA-----TERLTNTLFINIS---------------------------- 306
             + ++ ++  +         R       N                              
Sbjct: 194 TKVPMFPINGSTGQHGYTEKTRYPKAGDPNPEVKVGFVPVTGGDVVWAAFNEKDDQYFGT 253

Query: 307 ASYSPDSSQIVFESDREGKEQL--YVMQSNGSDQKRISQDKEASYFDPVWS------PQG 358
             +S D S ++ +    G++ L  Y +  N   +K I  ++++S+ D  +S         
Sbjct: 254 PYWSYDGSSLMVQWMNRGQDNLKFYAVDPNTGSKKEIYNEQQSSWVDLDYSGRIEYLQDK 313

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDTGS 416
                           + + DG+    +               ++  + F+ +K+  T S
Sbjct: 314 KHYILKSDKTGWAHFYLYQLDGTLVNPITSGKWQVTDLVLVDEKAKVVYFNARKEASTRS 373

Query: 417 KLYSIDLNGRNETLINTPAYA 437
            LY +D +G+N   +    Y+
Sbjct: 374 DLYRVDYDGKNLKRLTFGDYS 394



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 66/199 (33%), Gaps = 13/199 (6%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-- 267
           DQ    P +S +   +     +   D L+ Y +D       +     +S  +   +S   
Sbjct: 248 DQYFGTPYWSYDGSSLMVQWMNRGQDNLKFYAVDPNTGSKKEIYNEQQSSWVDLDYSGRI 307

Query: 268 ----NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR- 322
               + K  ++   K      Y   L       +T+  +         + +++V+ + R 
Sbjct: 308 EYLQDKKHYILKSDKTGWAHFYLYQLDGTLVNPITSGKWQVTDLVLVDEKAKVVYFNARK 367

Query: 323 --EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKD 379
               +  LY +  +G + KR++    +       SP G     T       +   ++   
Sbjct: 368 EASTRSDLYRVDYDGKNLKRLTFGDYSHRIQA--SPGGKYFITTYSNVSTPYKRALLDNT 425

Query: 380 GSQERLLVEDSNLQAPTWS 398
           G   + L +  + +   ++
Sbjct: 426 GKLIKTLGDTKSAEFDQYA 444



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 103/340 (30%), Gaps = 73/340 (21%)

Query: 158 ISDDIY--------QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTP 208
           I DD+Y        + +T  K    +  L      V+    N L  +D   G  +RY + 
Sbjct: 90  IKDDVYIQYGKEEPRQLTNSKEQEKNPTLSPDGKYVAFTRDNDLFTVDLTTGKELRYTSD 149

Query: 209 SRDQILF-------------------EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             D I                        ++P+ + +A+  +DD  +    +  +     
Sbjct: 150 GTDVIYNGWSSWVYYEEILGRSTNYKAFWWAPDSKHIAFMRFDDTKVPMFPINGSTGQHG 209

Query: 250 PKRIGNFR-------------------------------SMILAPRFSSNGKRALISVQK 278
                 +                                     P +S +G   ++    
Sbjct: 210 YTEKTRYPKAGDPNPEVKVGFVPVTGGDVVWAAFNEKDDQYFGTPYWSYDGSSLMVQWMN 269

Query: 279 DE--AMDIYSVDLQSNATERLTNTL-----FINISAS--YSPDSSQIVFESDREGKEQLY 329
                +  Y+VD  + + + + N        ++ S    Y  D    + +SD+ G    Y
Sbjct: 270 RGQDNLKFYAVDPNTGSKKEIYNEQQSSWVDLDYSGRIEYLQDKKHYILKSDKTGWAHFY 329

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---TKFSGEKFAIGVMKKDGSQERLL 386
           + Q +G+    I+  K     D V   +   + +    K +  +  +  +  DG   + L
Sbjct: 330 LYQLDGTLVNPITSGK-WQVTDLVLVDEKAKVVYFNARKEASTRSDLYRVDYDGKNLKRL 388

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                      SP G+  I +   +  T  K   +D  G+
Sbjct: 389 TFGDYSHRIQASPGGKYFI-TTYSNVSTPYKRALLDNTGK 427


>gi|239907762|ref|YP_002954503.1| hypothetical protein DMR_31260 [Desulfovibrio magneticus RS-1]
 gi|239797628|dbj|BAH76617.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 403

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 78/247 (31%), Gaps = 42/247 (17%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P  S +   +AY    +     V ++D      P+R       +    FS  G      V
Sbjct: 151 PAVSADGTLLAYCPEAEGG---VTVVDLTGKAKPRRFPTTPQAVREIHFSPQGLMLAWRV 207

Query: 277 Q-----KDEAMDIYSVDLQSNATER------LTNTLFINISASYSPDSSQIVFESDREGK 325
                  +    I SV+L +   +       L  T   +    +  D   + F       
Sbjct: 208 DDRRVPGNPRDRIESVNLAAPEAKPAVVVAWLPVTTAFDG---FGADGKTLAFFVYEGEA 264

Query: 326 EQLYVMQSNGSDQKRI--------SQDKEASYFDPVWSPQGDLIAFTK------------ 365
            QL ++ + G   ++         + D     + P  SP  D +                
Sbjct: 265 NQLRLVDAGGRVLRQTPISAFLDPTLDSSGDKYLP--SPTNDTLVLAASDVNPSPAMERW 322

Query: 366 FSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSR--KKDGDTGSKLYSID 422
            +    A+ +      +  RL   D     PTW+P G+ + FS   +K  +    LY ++
Sbjct: 323 LNDSGSALFLCDLGSATSYRLTPRDLVAVTPTWTPDGQRIYFSGLPEKPANGTHHLYRMN 382

Query: 423 LNGRNET 429
            +G   T
Sbjct: 383 ADGTGLT 389



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 83/269 (30%), Gaps = 46/269 (17%)

Query: 214 LFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
              P ++P     A A  D        ++M       P+R+        +P  S++G   
Sbjct: 105 AHRPAWAPAPGDPALAERDIVAYEDEPWIMVRASAAKPRRVAKG----ASPAVSADGTLL 160

Query: 273 LISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESD--------RE 323
               + +  +    VDL       R   T        +SP    + +  D        R+
Sbjct: 161 AYCPEAEGGVT--VVDLTGKAKPRRFPTTPQAVREIHFSPQGLMLAWRVDDRRVPGNPRD 218

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E + +          ++     + FD  +   G  +AF  + GE   + ++   G   
Sbjct: 219 RIESVNLAAPEAKPAVVVAWLPVTTAFDG-FGADGKTLAFFVYEGEANQLRLVDAGGRVL 277

Query: 384 RL----------LVEDSNLQAPTWSPSGRSLIFSRKK----------DGDTGSKLYSIDL 423
           R           L    +   P  SP+  +L+ +               D+GS L+  DL
Sbjct: 278 RQTPISAFLDPTLDSSGDKYLP--SPTNDTLVLAASDVNPSPAMERWLNDSGSALFLCDL 335

Query: 424 NGRNETLIN-------TPAYASDPQWVGF 445
                  +        TP +  D Q + F
Sbjct: 336 GSATSYRLTPRDLVAVTPTWTPDGQRIYF 364



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 25/146 (17%)

Query: 219 FSPNQQKVAYATYDDE-------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           F  + + +A+  Y+ E       D     L  T I        +       P  S     
Sbjct: 248 FGADGKTLAFFVYEGEANQLRLVDAGGRVLRQTPISAFLDPTLDSSGDKYLP--SPTNDT 305

Query: 272 ALISVQ------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            +++               D    ++  DL S  + RLT    + ++ +++PD  +I F 
Sbjct: 306 LVLAASDVNPSPAMERWLNDSGSALFLCDLGSATSYRLTPRDLVAVTPTWTPDGQRIYFS 365

Query: 320 SDRE----GKEQLYVMQSNGSDQKRI 341
              E    G   LY M ++G+    +
Sbjct: 366 GLPEKPANGTHHLYRMNADGTGLTEL 391


>gi|302880540|ref|XP_003039213.1| hypothetical protein NECHADRAFT_89426 [Nectria haematococca mpVI
           77-13-4]
 gi|256720015|gb|EEU33500.1| hypothetical protein NECHADRAFT_89426 [Nectria haematococca mpVI
           77-13-4]
          Length = 696

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 21/155 (13%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSP 311
           S    P+ S  GK    +     A++      +   D Q+ +  +  N    + S  +SP
Sbjct: 65  SGASDPQSSPCGKYFAFTGSTRRALEGKPISRVCITDGQNLSIIQNLNEDSNDHSPKWSP 124

Query: 312 DSSQIVFESDR--EGKEQLYVMQSNG-----SDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           D  ++ F SDR  EG+  +Y +  +G      + +R+ +D   S     WSP G  +   
Sbjct: 125 DGKKLAFLSDRHQEGRFAVYQVAWSGIESSAENVERLVEDPRGSLHHLDWSPSGRQLLLL 184

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
               +  +     +D  Q R    D   +AP+W P
Sbjct: 185 GIETDVAS----TQDSDQAR----DFLGKAPSWMP 211



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 43/116 (37%), Gaps = 14/116 (12%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFS----GEKFAIGVMKKDGSQE---RLLVEDSNLQAP 395
            +K +   DP  SP G   AFT  +      K    V   DG      + L EDSN  +P
Sbjct: 61  FNKISGASDPQSSPCGKYFAFTGSTRRALEGKPISRVCITDGQNLSIIQNLNEDSNDHSP 120

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG------RNETLINTP-AYASDPQWVG 444
            WSP G+ L F   +  +    +Y +  +G        E L+  P        W  
Sbjct: 121 KWSPDGKKLAFLSDRHQEGRFAVYQVAWSGIESSAENVERLVEDPRGSLHHLDWSP 176



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 14/114 (12%)

Query: 306 SASYSPDSSQIVFE-SDR---EGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDL 360
               SP      F  S R   EGK    V  ++G +   I   +++++   P WSP G  
Sbjct: 69  DPQSSPCGKYFAFTGSTRRALEGKPISRVCITDGQNLSIIQNLNEDSNDHSPKWSPDGKK 128

Query: 361 IAFT--KFSGEKFAIGVMKKDG-----SQERLLVED--SNLQAPTWSPSGRSLI 405
           +AF   +    +FA+  +   G          LVED   +L    WSPSGR L+
Sbjct: 129 LAFLSDRHQEGRFAVYQVAWSGIESSAENVERLVEDPRGSLHHLDWSPSGRQLL 182



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 80/253 (31%), Gaps = 44/253 (17%)

Query: 155 AHTIS-DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-SRDQ 212
            H+ + + I  +   +         F   +  +   K    V   DG N+  +   + D 
Sbjct: 56  IHSPAFNKISGASDPQSSPCGKYFAFTGSTRRALEGKPISRVCITDGQNLSIIQNLNEDS 115

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID------RAPKRIGNFRSMILAPRFS 266
               P++SP+ +K+A+ +   ++                     + + + R  +    +S
Sbjct: 116 NDHSPKWSPDGKKLAFLSDRHQEGRFAVYQVAWSGIESSAENVERLVEDPRGSLHHLDWS 175

Query: 267 SNGKRAL------------------------------ISVQKDEAMDIYSVDLQSNATER 296
            +G++ L                              +   + +   + + D  S+    
Sbjct: 176 PSGRQLLLLGIETDVASTQDSDQARDFLGKAPSWMPTVRTARWQRRFVSTYDWSSDNLRS 235

Query: 297 -LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN----GSDQKRISQDKEASYFD 351
            L+N L I   A++  + +     SD   +   Y  + +     S  K+      A    
Sbjct: 236 CLSNDLTI-WEAAWCGEDAIACIVSDEGTENDWYRARLSLLDVVSGYKQDVYIPSAQLGL 294

Query: 352 PVWSPQGDLIAFT 364
           P  SP GD IA  
Sbjct: 295 PTCSPDGDKIAVV 307


>gi|227887021|ref|ZP_04004826.1| oligogalacturonide lyase [Escherichia coli 83972]
 gi|227835993|gb|EEJ46459.1| oligogalacturonide lyase [Escherichia coli 83972]
 gi|307552112|gb|ADN44887.1| putative oligogalacturonide lyase [Escherichia coli ABU 83972]
          Length = 390

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 78/193 (40%), Gaps = 28/193 (14%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDRE 323
           F+++GK+ + + + D   + Y +DL +   ++LT     N    + SPD + + +  +  
Sbjct: 43  FTNDGKKLIFAAEFDCNRNYYLMDLVTQTAKQLTEGAGDNTFGGFLSPDDNYLFYVKNE- 101

Query: 324 GKEQLYVMQSNGSDQKRIS-----QDKEASYFD--------------PVWSPQGDLIAFT 364
             + L  +     ++  I           ++                  W+P  D   F 
Sbjct: 102 --KHLQRVDLTTLEEVTIYTVPDNWVGYGTWVANTDCTEIVGIEISKTDWTPLSDWKIFL 159

Query: 365 KFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGR-SLIFSRKKDGDT-GSKLY 419
           +F  +     ++  D   G+ E +L  ++ L  P + P+   ++ F  +   D   ++++
Sbjct: 160 EFYHKNPRCRLITIDLETGNAEVILDRNTWLGHPIFRPNNNDTIAFCHEGPHDLVDARMW 219

Query: 420 SIDLNGRNETLIN 432
            I+ +G NE  ++
Sbjct: 220 MINRDGTNERKVH 232



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/331 (10%), Positives = 89/331 (26%), Gaps = 45/331 (13%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG-----EKGDFNSRILFVS 181
            + L D+  +     K+                DD Y          ++ D  +      
Sbjct: 61  NYYLMDLVTQ---TAKQLTEGAGDNTFGGFLSPDDNYLFYVKNEKHLQRVDLTTLEEVTI 117

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +V    +     V + D   I  +  S+        ++P      +  +  ++     +
Sbjct: 118 YTVPDNWVGYGTWVANTDCTEIVGIEISKTD------WTPLSDWKIFLEFYHKNPRCRLI 171

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGK-RALISVQKDEA---MDIYSVDLQSNATERL 297
                    + I +  + +  P F  N         +         ++ ++       ++
Sbjct: 172 TIDLETGNAEVILDRNTWLGHPIFRPNNNDTIAFCHEGPHDLVDARMWMINRDGTNERKV 231

Query: 298 TNTLFIN--ISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRIS----------- 342
                        + PD S + + S  +G++Q Y+     +  +   +            
Sbjct: 232 HEHQLGESCTHEFWIPDGSALAYVSYMKGQQQRYIRKYNPDTDEDSLVMEMPACSHLMSN 291

Query: 343 QDKEASYFDPVWSP------------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +      D   SP                I       +K    V      + +      
Sbjct: 292 HNGILYVGDGSGSPVDVKDTCSYKIGNDPWIYILSSKNKKIHKLVKHNSSWRVQKGDRQV 351

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               P++SP  + +++S   +G+    +  I
Sbjct: 352 THPHPSFSPDNKYVLYSCDAEGEPALYMAKI 382



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 82/245 (33%), Gaps = 38/245 (15%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGK 270
              ++  F+ + +K+ +A     D  R Y +   + +  K++           F S +  
Sbjct: 36  NYFYQKCFTNDGKKLIFAAEF--DCNRNYYLMDLVTQTAKQLTEGAGDNTFGGFLSPDDN 93

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL-------------------TNTLFINISAS-YS 310
                        +  VDL +     +                   T  + I IS + ++
Sbjct: 94  YLFYVKN---EKHLQRVDLTTLEEVTIYTVPDNWVGYGTWVANTDCTEIVGIEISKTDWT 150

Query: 311 PDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKFS 367
           P S   +F        +  L  +     + + I  D+      P++ P   D IAF    
Sbjct: 151 PLSDWKIFLEFYHKNPRCRLITIDLETGNAEVIL-DRNTWLGHPIFRPNNNDTIAFCHEG 209

Query: 368 GEKF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKL--Y 419
                   + ++ +DG+ ER + E    ++ T   W P G +L +     G     +  Y
Sbjct: 210 PHDLVDARMWMINRDGTNERKVHEHQLGESCTHEFWIPDGSALAYVSYMKGQQQRYIRKY 269

Query: 420 SIDLN 424
           + D +
Sbjct: 270 NPDTD 274



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 51/154 (33%), Gaps = 25/154 (16%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++ D  +++F ++ +     Y+M       K++++    + F    SP  + + + K   
Sbjct: 43  FTNDGKKLIFAAEFDCNRNYYLMDLVTQTAKQLTEGAGDNTFGGFLSPDDNYLFYVKNEK 102

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQA---------------------PTWSPSGRSLIFS 407
               +  +     +E  +    +                          W+P     IF 
Sbjct: 103 ---HLQRVDLTTLEEVTIYTVPDNWVGYGTWVANTDCTEIVGIEISKTDWTPLSDWKIFL 159

Query: 408 RKKDGDTGSKLYSIDL-NGRNETLINTPAYASDP 440
                +   +L +IDL  G  E +++   +   P
Sbjct: 160 EFYHKNPRCRLITIDLETGNAEVILDRNTWLGHP 193


>gi|26246224|ref|NP_752263.1| putative oligogalacturonide lyase [Escherichia coli CFT073]
 gi|300995704|ref|ZP_07181230.1| oligogalacturonide lyase family protein [Escherichia coli MS 45-1]
 gi|301046250|ref|ZP_07193418.1| oligogalacturonide lyase family protein [Escherichia coli MS 185-1]
 gi|331656260|ref|ZP_08357222.1| oligogalacturonide lyase [Escherichia coli TA206]
 gi|331683545|ref|ZP_08384145.1| oligogalacturonide lyase [Escherichia coli H299]
 gi|26106621|gb|AAN78807.1|AE016755_307 Putative oligogalacturonide lyase [Escherichia coli CFT073]
 gi|300301761|gb|EFJ58146.1| oligogalacturonide lyase family protein [Escherichia coli MS 185-1]
 gi|300406097|gb|EFJ89635.1| oligogalacturonide lyase family protein [Escherichia coli MS 45-1]
 gi|315290095|gb|EFU49476.1| oligogalacturonide lyase family protein [Escherichia coli MS 153-1]
 gi|315300374|gb|EFU59607.1| oligogalacturonide lyase family protein [Escherichia coli MS 16-3]
 gi|331054508|gb|EGI26517.1| oligogalacturonide lyase [Escherichia coli TA206]
 gi|331079224|gb|EGI50422.1| oligogalacturonide lyase [Escherichia coli H299]
          Length = 390

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 78/193 (40%), Gaps = 28/193 (14%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDRE 323
           F+++GK+ + + + D   + Y +DL +   ++LT     N    + SPD + + +  +  
Sbjct: 43  FTNDGKKLIFAAEFDCNRNYYLMDLVTQTAKQLTEGAGDNTFGGFLSPDDNYLFYVKNE- 101

Query: 324 GKEQLYVMQSNGSDQKRIS-----QDKEASYFD--------------PVWSPQGDLIAFT 364
             + L  +     ++  I           ++                  W+P  D   F 
Sbjct: 102 --KHLQRVDLTTLEEVTIYTVPDNWVGYGTWVANTDCTEIVGIEISKTDWTPLSDWKIFL 159

Query: 365 KFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGR-SLIFSRKKDGDT-GSKLY 419
           +F  +     ++  D   G+ E +L  ++ L  P + P+   ++ F  +   D   ++++
Sbjct: 160 EFYHKNPRCRLITIDLETGNAEVILDRNTWLGHPIFRPNNNDTIAFCHEGPHDLVDARMW 219

Query: 420 SIDLNGRNETLIN 432
            I+ +G NE  ++
Sbjct: 220 MINRDGTNERKVH 232



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/331 (10%), Positives = 89/331 (26%), Gaps = 45/331 (13%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG-----EKGDFNSRILFVS 181
            + L D+  +     K+                DD Y          ++ D  +      
Sbjct: 61  NYYLMDLVTQ---TAKQLTEGAGDNTFGGFLSPDDNYLFYVKNEKHLQRVDLTTLEEVTI 117

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +V    +     V + D   I  +  S+        ++P      +  +  ++     +
Sbjct: 118 YTVPDNWVGYGTWVANTDCTEIVGIEISKTD------WTPLSDWKIFLEFYHKNPRCRLI 171

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGK-RALISVQKDEA---MDIYSVDLQSNATERL 297
                    + I +  + +  P F  N         +         ++ ++       ++
Sbjct: 172 TIDLETGNAEVILDRNTWLGHPIFRPNNNDTIAFCHEGPHDLVDARMWMINRDGTNERKV 231

Query: 298 TNTLFIN--ISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRIS----------- 342
                        + PD S + + S  +G++Q Y+     +  +   +            
Sbjct: 232 HEHQLGESCTHEFWIPDGSALAYVSYMKGQQQRYIRKYNPDTDEDSLVMEMPACSHLMSN 291

Query: 343 QDKEASYFDPVWSP------------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +      D   SP                I       +K    V      + +      
Sbjct: 292 HNGILYVGDGSGSPVDVKDTCSYKIENDPWIYILSSKNKKIHKLVKHNSSWRVQKGDRQV 351

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               P++SP  + +++S   +G+    +  I
Sbjct: 352 THPHPSFSPDNKYVLYSCDAEGEPALYMAKI 382



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 82/245 (33%), Gaps = 38/245 (15%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGK 270
              ++  F+ + +K+ +A     D  R Y +   + +  K++           F S +  
Sbjct: 36  NYFYQKCFTNDGKKLIFAAEF--DCNRNYYLMDLVTQTAKQLTEGAGDNTFGGFLSPDDN 93

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL-------------------TNTLFINISAS-YS 310
                        +  VDL +     +                   T  + I IS + ++
Sbjct: 94  YLFYVKN---EKHLQRVDLTTLEEVTIYTVPDNWVGYGTWVANTDCTEIVGIEISKTDWT 150

Query: 311 PDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKFS 367
           P S   +F        +  L  +     + + I  D+      P++ P   D IAF    
Sbjct: 151 PLSDWKIFLEFYHKNPRCRLITIDLETGNAEVIL-DRNTWLGHPIFRPNNNDTIAFCHEG 209

Query: 368 GEKF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKL--Y 419
                   + ++ +DG+ ER + E    ++ T   W P G +L +     G     +  Y
Sbjct: 210 PHDLVDARMWMINRDGTNERKVHEHQLGESCTHEFWIPDGSALAYVSYMKGQQQRYIRKY 269

Query: 420 SIDLN 424
           + D +
Sbjct: 270 NPDTD 274



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 51/154 (33%), Gaps = 25/154 (16%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++ D  +++F ++ +     Y+M       K++++    + F    SP  + + + K   
Sbjct: 43  FTNDGKKLIFAAEFDCNRNYYLMDLVTQTAKQLTEGAGDNTFGGFLSPDDNYLFYVKNEK 102

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQA---------------------PTWSPSGRSLIFS 407
               +  +     +E  +    +                          W+P     IF 
Sbjct: 103 ---HLQRVDLTTLEEVTIYTVPDNWVGYGTWVANTDCTEIVGIEISKTDWTPLSDWKIFL 159

Query: 408 RKKDGDTGSKLYSIDL-NGRNETLINTPAYASDP 440
                +   +L +IDL  G  E +++   +   P
Sbjct: 160 EFYHKNPRCRLITIDLETGNAEVILDRNTWLGHP 193


>gi|90023188|ref|YP_529015.1| type II secretion system protein C [Saccharophagus degradans 2-40]
 gi|89952788|gb|ABD82803.1| conserved hypothetical protein [Saccharophagus degradans 2-40]
          Length = 980

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 75/186 (40%), Gaps = 44/186 (23%)

Query: 266 SSNGKRALISVQKD----------EAMDIYSVDLQSNATERLTNT-----LFINISASYS 310
           S +G + + +++               +I+  D +++   R+  +        +++  Y 
Sbjct: 120 SDDGLKLIFAMRAPADEDADEDEQPTWNIWEYDRETDVLRRIIQSDIAAEAGEDVAPYYL 179

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD  +IVF S R+ + +  ++  N      +++D+E                      E 
Sbjct: 180 PDG-RIVFSSTRQRRSKAILLDENKPQFAALTEDREQ---------------------EA 217

Query: 371 FAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSR-----KKDGDTGSKLYSIDLN 424
           F + VM  DG+  E+L    S+   PT   +G+ ++F R      + G     LY+I+ +
Sbjct: 218 FLLHVMDDDGANIEQLTFNQSHDLHPTVLDNGQ-ILFLRWDNFDNRGGMDRLSLYTINPD 276

Query: 425 GRNETL 430
           G N  L
Sbjct: 277 GTNPAL 282



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 51/162 (31%), Gaps = 44/162 (27%)

Query: 220 SPNQQKVAYATY---------DDEDILRVYLMDTRIDRAPKRIGNF----RSMILAPRFS 266
           S +  K+ +A           D++    ++  D   D   + I +         +AP + 
Sbjct: 120 SDDGLKLIFAMRAPADEDADEDEQPTWNIWEYDRETDVLRRIIQSDIAAEAGEDVAPYYL 179

Query: 267 SNGKRALISVQKDEAMD------------------------IYSVDLQSNATERLTNTLF 302
            +G R + S  +                             ++ +D      E+LT    
Sbjct: 180 PDG-RIVFSSTRQRRSKAILLDENKPQFAALTEDREQEAFLLHVMDDDGANIEQLTFNQS 238

Query: 303 INISASYSPDSSQIVFESD----REGKEQ--LYVMQSNGSDQ 338
            ++  +   +   +    D    R G ++  LY +  +G++ 
Sbjct: 239 HDLHPTVLDNGQILFLRWDNFDNRGGMDRLSLYTINPDGTNP 280


>gi|209523150|ref|ZP_03271706.1| WD-40 repeat protein [Arthrospira maxima CS-328]
 gi|209496301|gb|EDZ96600.1| WD-40 repeat protein [Arthrospira maxima CS-328]
          Length = 463

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 75/240 (31%), Gaps = 17/240 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   ++    +P+ + +A  +YD      + + D       + I    S + +   
Sbjct: 60  TLNGHSAWVYAAAIAPDGKVLASGSYDG----TIKIWDLESGSLRQTIAAHASAVASLAI 115

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREG 324
           + +GK   IS   D  + ++  DL +    R  N    ++   + +PD   I   S    
Sbjct: 116 APDGKHL-ISGSVDNRVRLW--DLDTGKLIRTFNGHTDDVKVVAIAPDGKTIASGS---A 169

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +    G  +   +           ++P    +  +        I  ++       
Sbjct: 170 DKTIRLWNLQG--ETLATLQDVDWVRALAFTPDSQYLL-SGCEDGTIGIWQLQDGKKSLT 226

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +      ++A   SP G+  +F+   D D    L++        TL           W  
Sbjct: 227 IQAHSGVVRAIAVSPDGQ--LFASGSD-DRTITLWNASNRSILNTLTGHSHRVQSLAWSP 283



 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 96/302 (31%), Gaps = 38/302 (12%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    ++WD++               S R+     +  +        G        
Sbjct: 81  ASGSYDGTIKIWDLESG-------------SLRQTIAAHASAVASLAIAPDG-------- 119

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
             + ++SG + N + + D D   +          +     +P+ + +A  + D    +R+
Sbjct: 120 --KHLISGSVDNRVRLWDLDTGKLIRTFNGHTDDVKVVAIAPDGKTIASGSAD--KTIRL 175

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           + +        + +   R++     F+ + +  L S  +D  + I+ +      +  +  
Sbjct: 176 WNLQGETLATLQDVDWVRAL----AFTPDSQYLL-SGCEDGTIGIWQLQ-DGKKSLTIQA 229

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              +  + + SPD       SD      + +  ++                   WSP G 
Sbjct: 230 HSGVVRAIAVSPDGQLFASGSD---DRTITLWNASNRSILNTLTGHSHRVQSLAWSPDGS 286

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +  +        +  + +    + L     ++QA  +SP GR  + +     D   KL+
Sbjct: 287 TLV-SGSHDRTVRLWNVAEGKVFDALQAHAKSVQAVVFSPDGRQFVSASS---DETIKLW 342

Query: 420 SI 421
            I
Sbjct: 343 LI 344



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 45/286 (15%), Positives = 100/286 (34%), Gaps = 18/286 (6%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSIT---GEKGDFNSRILFVSESVVSGIIKNSLCV 195
           I+G     +       +  +S   Y S+T        + + I    + + SG    ++ +
Sbjct: 32  IVGLTVLKTGTQLLVSSPDMSSLSYPSLTLNGHSAWVYAAAIAPDGKVLASGSYDGTIKI 91

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D +  ++R    +    +     +P+ + +   + D+    RV L D    +  +    
Sbjct: 92  WDLESGSLRQTIAAHASAVASLAIAPDGKHLISGSVDN----RVRLWDLDTGKLIRTFNG 147

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
               +     + +GK    S   D+ + ++  +LQ      L   +    + +++PDS  
Sbjct: 148 HTDDVKVVAIAPDGKTIA-SGSADKTIRLW--NLQGETLATL-QDVDWVRALAFTPDSQY 203

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           ++     +G   ++ +  +G     I Q           SP G L A +        +  
Sbjct: 204 LL-SGCEDGTIGIWQL-QDGKKSLTI-QAHSGVVRAIAVSPDGQLFA-SGSDDRTITLWN 259

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    L      +Q+  WSP G +L+       D   +L+++
Sbjct: 260 ASNRSILNTLTGHSHRVQSLAWSPDGSTLVSGSH---DRTVRLWNV 302



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 47/282 (16%), Positives = 90/282 (31%), Gaps = 43/282 (15%)

Query: 104 NSLGAQVLVTGRVIKEGKDRLRV------EFRLWDVKDRKQIIGKKFFSSPASWRKIAHT 157
            ++ A       +      +  +        RLWD+   K I  + F       + +A  
Sbjct: 101 QTIAAHASAVASLAIAPDGKHLISGSVDNRVRLWDLDTGKLI--RTFNGHTDDVKVVA-- 156

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           I+ D                    +++ SG    ++ + +  G  +  L           
Sbjct: 157 IAPD-------------------GKTIASGSADKTIRLWNLQGETLATLQDVDWVRAL-- 195

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P+ Q   Y     ED   + +   +  +    I     ++ A   S +G +   S  
Sbjct: 196 AFTPDSQ---YLLSGCEDG-TIGIWQLQDGKKSLTIQAHSGVVRAIAVSPDG-QLFASGS 250

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGS 336
            D  + +++   +S     LT       S ++SPD S +V  S DR     + +      
Sbjct: 251 DDRTITLWNASNRS-ILNTLTGHSHRVQSLAWSPDGSTLVSGSHDRT----VRLWNVAEG 305

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                 Q    S    V+SP G     +  S E   + ++  
Sbjct: 306 KVFDALQAHAKSVQAVVFSPDGRQFV-SASSDETIKLWLIAP 346


>gi|209526342|ref|ZP_03274871.1| WD-40 repeat protein [Arthrospira maxima CS-328]
 gi|209493271|gb|EDZ93597.1| WD-40 repeat protein [Arthrospira maxima CS-328]
          Length = 214

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 67/199 (33%), Gaps = 10/199 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +  VS     +L + D +              ++    +P+ ++   A+ D      + L
Sbjct: 26  KRAVSASSDKTLKLWDLERGTELATLRGHSDRVWAVAIAPDGKRAVSASMDK----TLKL 81

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                      +      + A   + +GKR  +S   D+ + ++ ++  +       ++ 
Sbjct: 82  WYLATGTELATLTGHSRGVNAVAIAPDGKR-AVSASMDKTLKLWDLERATELATLRGHSW 140

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +N  A  +PD  + V  SD    + L +      +    +   E +      +P G  +
Sbjct: 141 SVNAVA-IAPDGKRAVSASD---DKTLKLWDLETGEV-LATFTGEGAMESCAIAPDGVTV 195

Query: 362 AFTKFSGEKFAIGVMKKDG 380
                SG  + + +    G
Sbjct: 196 VAGDGSGRVYFLRLEGLSG 214



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 67/173 (38%), Gaps = 9/173 (5%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             + +G   + + A   + +GKRA+ S   D+ + ++ ++ +      L        + +
Sbjct: 5   PREAMGGHSNRVEAVAIAPDGKRAV-SASSDKTLKLWDLE-RGTELATLRGHSDRVWAVA 62

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +PD  + V  S  +   +L+ + + G++   ++            +P G   A +    
Sbjct: 63  IAPDGKRAVSAS-MDKTLKLWYL-ATGTELATLT-GHSRGVNAVAIAPDGKR-AVSASMD 118

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +   +  +++      L     ++ A   +P G+  + +     D   KL+ +
Sbjct: 119 KTLKLWDLERATELATLRGHSWSVNAVAIAPDGKRAVSASD---DKTLKLWDL 168


>gi|323476968|gb|ADX82206.1| peptidase S41 [Sulfolobus islandicus HVE10/4]
          Length = 1008

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 4/116 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +++  ++   K +L+V + +  + + I + +     +  W P G+  A+    G 
Sbjct: 368 SPDGKKVLLSNN---KLELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGY 424

Query: 370 -KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +I + + DG   R+        +P++ P GR L F   +  D  +     +L+
Sbjct: 425 YTQSIKLARIDGKIVRITTPYGYDFSPSFDPDGRYLYFLAARHLDPTNDKVIFNLS 480



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 55/145 (37%), Gaps = 6/145 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
              +  V+     + L ++ +DG N + +     +I    + SP+ +KV  +     + L
Sbjct: 328 ALPNGDVIGVNDDDKLVILGKDG-NEKVINRDFARIERV-KVSPDGKKVLLS----NNKL 381

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ +   D A     +   +IL   +  NG+    +  +        +        R+
Sbjct: 382 ELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGYYTQSIKLARIDGKIVRI 441

Query: 298 TNTLFINISASYSPDSSQIVFESDR 322
           T     + S S+ PD   + F + R
Sbjct: 442 TTPYGYDFSPSFDPDGRYLYFLAAR 466



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 66/221 (29%), Gaps = 63/221 (28%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDR 322
            +  G     +   D    ++ + L+     R+T+ L ++I    SP   ++ F     +
Sbjct: 8   PDIRGDLISFTSDDD----VWLLSLKDMKPLRITSGLGVSIRPKISPSGRKVAFTVVWLK 63

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVM 376
            GK+   +        +R++     +     W  + ++I  T F        E + + V 
Sbjct: 64  NGKQGGDIYVVEDGQARRVTYFGSRNSRVTNWLSEDEIIVITDFHTPFGQWNEAYKVDVN 123

Query: 377 KKDGSQE-------------RLLVEDSNLQAPTW-------------SPSGRS------- 403
             +  +               +++       P W             S  G         
Sbjct: 124 NGETEKLPFGMLSNIVKRDNVIVIARGYQDLPNWKGYKGGTKGELWISRDGGKTFEKFVS 183

Query: 404 --------------LIFSRKKDGDTGSKLYSIDLNGRNETL 430
                         + F    +G     LYS+DLNG++   
Sbjct: 184 LDGNVSWPMIVKERVYFLSDHEG--VGNLYSVDLNGKDLRR 222



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 67/225 (29%), Gaps = 59/225 (26%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FS 266
            S   +   P+ SP+ +KVA+     ++  +   +    D   +R+  F S       + 
Sbjct: 37  TSGLGVSIRPKISPSGRKVAFTVVWLKNGKQGGDIYVVEDGQARRVTYFGSRNSRVTNWL 96

Query: 267 SNGKRALIS---VQKDEAMDIYSVDLQSNATERLTNT---------------LFINISAS 308
           S  +  +I+       +  + Y VD+ +  TE+L                         +
Sbjct: 97  SEDEIIVITDFHTPFGQWNEAYKVDVNNGETEKLPFGMLSNIVKRDNVIVIARGYQDLPN 156

Query: 309 Y-------------SPDSSQ---------------------IVFESDREGKEQLYVMQSN 334
           +             S D  +                     + F SD EG   LY +  N
Sbjct: 157 WKGYKGGTKGELWISRDGGKTFEKFVSLDGNVSWPMIVKERVYFLSDHEGVGNLYSVDLN 216

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           G D +R        ++    +  G  I F         I +   +
Sbjct: 217 GKDLRR--HTNFTDFYCRNANSDGKRIVFQNAGD----IYLYDPE 255



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 97/263 (36%), Gaps = 36/263 (13%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G  K  L +  RDG        S D  +  P     +    Y   D E +  +Y +
Sbjct: 158 KGYKGGTKGELWIS-RDGGKTFEKFVSLDGNVSWPMIVKER---VYFLSDHEGVGNLYSV 213

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    +  +R  NF         S +GKR +       A DIY  D + ++  +L   L 
Sbjct: 214 DLN-GKDLRRHTNFTDFYCRNANS-DGKRIVFQ----NAGDIYLYDPEKDSLSKLDIDLP 267

Query: 303 INI---SASYSP----------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +       +            + + I   S    + + ++M+       ++ + +   Y
Sbjct: 268 TDRKKRQPKFVSVIEYMNEAVVNGNYIALTS----RGKAFLMRPWDGPAVQLGKKQGVKY 323

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                 P GD+I       +   + ++ KDG+++ +  + + ++    SP G+ ++ S  
Sbjct: 324 RQIQALPNGDVIGV----NDDDKLVILGKDGNEKVINRDFARIERVKVSPDGKKVLLSNN 379

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           K      +L+  +++  N  LI+
Sbjct: 380 K-----LELWVYEIDSDNARLID 397



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDR 322
            S +GK+ L+S  K   ++++  ++ S+   RL +    ++     + P+     +    
Sbjct: 367 VSPDGKKVLLSNNK---LELWVYEIDSDNA-RLIDKSEYDLILEFDWHPNGEWFAYAFPE 422

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               Q   +        RI+       F P + P G  + F
Sbjct: 423 GYYTQSIKLARIDGKIVRITT-PYGYDFSPSFDPDGRYLYF 462


>gi|300725262|ref|YP_003714591.1| hypothetical protein XNC1_4507 [Xenorhabdus nematophila ATCC 19061]
 gi|297631808|emb|CBJ92529.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
          Length = 429

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 55/148 (37%), Gaps = 20/148 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQLY 329
               +          +RLT T        +N+   +   SPD S+I F   D +G  QL+
Sbjct: 275 GTETMLPAPPAGVKQKRLTFTHDKRWPGVVNVPRHWLRTSPDGSKICFLMKDDDGIVQLW 334

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +  NG + K+I+   +       W  +G  IA    +    ++ +      + R L   
Sbjct: 335 YISPNGGEPKQITYGNDDIQSAFSWDSRGRFIACVCDN----SVVLCDSQSGEMRRLT-Q 389

Query: 390 SNLQAPT-----WSPSGRSLIFSRKKDG 412
               AP+      SP  R + F R  +G
Sbjct: 390 RTENAPSADAIVISPDDRYVAFMRDIEG 417



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 12/128 (9%)

Query: 256 FRSMILAPR-F---SSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLF-INISASY 309
           +  ++  PR +   S +G +    +   D  + ++ +       +++T     I  + S+
Sbjct: 300 WPGVVNVPRHWLRTSPDGSKICFLMKDDDGIVQLWYISPNGGEPKQITYGNDDIQSAFSW 359

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFS 367
                 I    D      + +  S   + +R++Q  E   S    V SP    +AF +  
Sbjct: 360 DSRGRFIACVCDNS----VVLCDSQSGEMRRLTQRTENAPSADAIVISPDDRYVAFMRDI 415

Query: 368 GEKFAIGV 375
                I V
Sbjct: 416 EGYRQICV 423



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 11/126 (8%)

Query: 212 QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            ++  PR     SP+  K+ +   DD+ I++++ +        +       +  A  + S
Sbjct: 302 GVVNVPRHWLRTSPDGSKICFLMKDDDGIVQLWYISPNGGEPKQITYGNDDIQSAFSWDS 361

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREG 324
            G+             +   D QS    RLT       SA     SPD   + F  D EG
Sbjct: 362 RGRFIACVCDNS----VVLCDSQSGEMRRLTQRTENAPSADAIVISPDDRYVAFMRDIEG 417

Query: 325 KEQLYV 330
             Q+ V
Sbjct: 418 YRQICV 423


>gi|41053609|ref|NP_957147.1| WD repeat-containing protein 61 [Danio rerio]
 gi|82237524|sp|Q6P5M2|WDR61_DANRE RecName: Full=WD repeat-containing protein 61
 gi|38541742|gb|AAH62834.1| Zgc:77675 [Danio rerio]
          Length = 305

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/284 (17%), Positives = 100/284 (35%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQV-LVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W   G Q+ +V+  + + G       L    RLWD++  KQI  K   + P     +A 
Sbjct: 57  QWTLEGHQLGVVSVNISQNGAIAASSSLDAHIRLWDLETGKQI--KSMDAGPVDAWTVA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D                   S+ + +G     + +   +     +   +R + +  
Sbjct: 114 -FSPD-------------------SKYIATGSHLGKVNIFGVESGKKEHSLDTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L+      +S ++SPD +  V  S     + + V  +
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LSGHGSWVLSVAFSPDDTHFVSSSS---DKSIKVWDT 261

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +         D +   +   ++P G  I     +G+  AI +  
Sbjct: 262 SSRSCVNTFFDHQDQVWSVKYNPTGSKIV---SAGDDRAIHIYD 302



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 74/232 (31%), Gaps = 21/232 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D +         +     +   FSP+ + +A  ++  +    V +      +    
Sbjct: 88  IRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGK----VNIFGVESGKKEHS 143

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      IL+  +S +GK    S   D  ++I+ +         L        S ++SPD
Sbjct: 144 LDTRGKFILSIAYSPDGKYLA-SGAIDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPD 201

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S  +V  SD      + +     ++         +      +SP       +  S +   
Sbjct: 202 SQLLVTASD---DGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTHFV-SSSSDKSIK 257

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWS----PSGRSLIFSRKKDGDTGSKLYS 420
           +     D S    +    + Q   WS    P+G  ++       D    +Y 
Sbjct: 258 VW----DTSSRSCVNTFFDHQDQVWSVKYNPTGSKIV---SAGDDRAIHIYD 302



 Score = 37.7 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 19/140 (13%), Positives = 44/140 (31%), Gaps = 7/140 (5%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGK 325
           +G   +++   D+ + ++          + T        +S + S + +     S     
Sbjct: 30  DGSETIVTGSLDDLVKVWKWS-DEKLELQWTLEGHQLGVVSVNISQNGAIAASSSL---D 85

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +       Q +         +   +SP    IA     G K  I  ++    +  L
Sbjct: 86  AHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLG-KVNIFGVESGKKEHSL 144

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
                 + +  +SP G+ L 
Sbjct: 145 DTRGKFILSIAYSPDGKYLA 164


>gi|323473971|gb|ADX84577.1| peptidase S41 [Sulfolobus islandicus REY15A]
          Length = 1008

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 4/116 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +++  ++   K +L+V + +  + + I + +     +  W P G+  A+    G 
Sbjct: 368 SPDGKKVLLSNN---KLELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGY 424

Query: 370 -KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +I + + DG   R+        +P++ P GR L F   +  D  +     +L+
Sbjct: 425 YTQSIKLARIDGKIVRITTPYGYDFSPSFDPDGRYLYFLAARHLDPTNDKVIFNLS 480



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 55/145 (37%), Gaps = 6/145 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
              +  V+     + L ++ +DG N + +     +I    + SP+ +KV  +     + L
Sbjct: 328 ALPNGDVIGVNDDDKLVILGKDG-NEKVINRDFARIERV-KVSPDGKKVLLS----NNKL 381

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +++ +   D A     +   +IL   +  NG+    +  +        +        R+
Sbjct: 382 ELWVYEIDSDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGYYTQSIKLARIDGKIVRI 441

Query: 298 TNTLFINISASYSPDSSQIVFESDR 322
           T     + S S+ PD   + F + R
Sbjct: 442 TTPYGYDFSPSFDPDGRYLYFLAAR 466



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 59/190 (31%), Gaps = 22/190 (11%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDR 322
            +  G     +   D    ++ + L+     R+T+ L ++I    SP   ++ F     +
Sbjct: 8   PDIRGDLISFTSDDD----VWLLSLKDMKPLRITSGLGVSIRPKISPSGRKVAFTVVWLK 63

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMKKD 379
            GK+   +        +R++     +     W  + ++I  T F    G+      +  +
Sbjct: 64  SGKQGGDIYVVEDGQARRVTYFGSRNSRVANWLSEDEIIVITDFHTPFGQWNEAYKVDVN 123

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLYSIDLNGRNETL 430
             +   L          W      +I         +   K G  G    S D     E  
Sbjct: 124 NGETEKLPFGMLSNIVKW--DNVIVIARGYQDLPNWKGYKGGTKGELWISRDGGKTFEKF 181

Query: 431 INTPAYASDP 440
           ++     S P
Sbjct: 182 VSLDGNVSWP 191



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 93/227 (40%), Gaps = 29/227 (12%)

Query: 221 PN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-- 276
           P+     +++ + DD     V+L+  + D  P RI +   + + P+ S +G++   +V  
Sbjct: 8   PDIRGDLISFTSDDD-----VWLLSLK-DMKPLRITSGLGVSIRPKISPSGRKVAFTVVW 61

Query: 277 --QKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV---FESDREGKEQLYV 330
                +  DIY V  +     R+T     N   A++  +   IV   F +      + Y 
Sbjct: 62  LKSGKQGGDIYVV--EDGQARRVTYFGSRNSRVANWLSEDEIIVITDFHTPFGQWNEAYK 119

Query: 331 MQSNGSDQKRISQDKEAS---YFDPVWSPQG--DLIAFTKFSGEKFAIGVMKKDGSQ--E 383
           +  N  + +++     ++   + + +   +G  DL  +  + G       + +DG +  E
Sbjct: 120 VDVNNGETEKLPFGMLSNIVKWDNVIVIARGYQDLPNWKGYKGGTKGELWISRDGGKTFE 179

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           + +  D N+  P        + F    +G     LYS+DLNG++   
Sbjct: 180 KFVSLDGNVSWPMIVK--ERVYFLSDHEG--VGNLYSVDLNGKDLRR 222



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 66/225 (29%), Gaps = 59/225 (26%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FS 266
            S   +   P+ SP+ +KVA+     +   +   +    D   +R+  F S       + 
Sbjct: 37  TSGLGVSIRPKISPSGRKVAFTVVWLKSGKQGGDIYVVEDGQARRVTYFGSRNSRVANWL 96

Query: 267 SNGKRALIS---VQKDEAMDIYSVDLQSNATERLTNT---------------LFINISAS 308
           S  +  +I+       +  + Y VD+ +  TE+L                         +
Sbjct: 97  SEDEIIVITDFHTPFGQWNEAYKVDVNNGETEKLPFGMLSNIVKWDNVIVIARGYQDLPN 156

Query: 309 Y-------------SPDSSQ---------------------IVFESDREGKEQLYVMQSN 334
           +             S D  +                     + F SD EG   LY +  N
Sbjct: 157 WKGYKGGTKGELWISRDGGKTFEKFVSLDGNVSWPMIVKERVYFLSDHEGVGNLYSVDLN 216

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           G D +R        ++    +  G  I F         I +   +
Sbjct: 217 GKDLRR--HTNFTDFYCRNANSDGKRIVFQNAGD----IYLYDPE 255



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 97/263 (36%), Gaps = 36/263 (13%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G  K  L +  RDG        S D  +  P     +    Y   D E +  +Y +
Sbjct: 158 KGYKGGTKGELWIS-RDGGKTFEKFVSLDGNVSWPMIVKER---VYFLSDHEGVGNLYSV 213

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    +  +R  NF         S +GKR +       A DIY  D + ++  +L   L 
Sbjct: 214 DLN-GKDLRRHTNFTDFYCRNANS-DGKRIVFQ----NAGDIYLYDPEKDSLSKLDIDLP 267

Query: 303 INI---SASYSP----------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +       +            + + I   S    + + ++M+       ++ + +   Y
Sbjct: 268 TDRKKRQPKFVSVIEYMNEAVVNGNYIALTS----RGKAFLMRPWDGPAVQLGKKQGVKY 323

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                 P GD+I       +   + ++ KDG+++ +  + + ++    SP G+ ++ S  
Sbjct: 324 RQIQALPNGDVIGV----NDDDKLVILGKDGNEKVINRDFARIERVKVSPDGKKVLLSNN 379

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           K      +L+  +++  N  LI+
Sbjct: 380 K-----LELWVYEIDSDNARLID 397



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 7/101 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDR 322
            S +GK+ L+S  K   ++++  ++ S+   RL +    ++     + P+     +    
Sbjct: 367 VSPDGKKVLLSNNK---LELWVYEIDSDNA-RLIDKSEYDLILEFDWHPNGEWFAYAFPE 422

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               Q   +        RI+       F P + P G  + F
Sbjct: 423 GYYTQSIKLARIDGKIVRITT-PYGYDFSPSFDPDGRYLYF 462


>gi|163841549|ref|YP_001625954.1| peptidase [Renibacterium salmoninarum ATCC 33209]
 gi|162955025|gb|ABY24540.1| peptidase [Renibacterium salmoninarum ATCC 33209]
          Length = 296

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 14/183 (7%)

Query: 265 FSSNGKRALI-----SVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVF 318
            S +G  A++       + D    +  +DL +     L +      +    SPD+SQ+V 
Sbjct: 36  LSPDGSFAVVGVFRPVAKADNYTRLERIDLDTGERSVLIDEPDARFTPGPISPDNSQMVV 95

Query: 319 ESDREGKE------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +            L++   +  + K++  + +       W P+G+ +  T     +  
Sbjct: 96  TRESITDPAQAMELTLWLFDFSTGNMKQLVAEWDHWAAPQAWLPRGERLVVTADHRGRSP 155

Query: 373 IGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           I ++         +  +D++      SP G +L ++ +      ++   IDL     + +
Sbjct: 156 IFLIDISSGDVTQISTDDASYSNVLVSPDGNTL-YALRSSYAFPAEAVRIDLQSGEVSAL 214

Query: 432 NTP 434
             P
Sbjct: 215 LGP 217



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 49/156 (31%), Gaps = 5/156 (3%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T    D +  ++ V   V        L  +D D      L    D        SP+  ++
Sbjct: 34  TELSPDGSFAVVGVFRPVAKADNYTRLERIDLDTGERSVLIDEPDARFTPGPISPDNSQM 93

Query: 227 AYATYDDEDI-----LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
                   D      L ++L D       + +  +        +   G+R +++      
Sbjct: 94  VVTRESITDPAQAMELTLWLFDFSTGNMKQLVAEWDHWAAPQAWLPRGERLVVTADHRGR 153

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             I+ +D+ S    +++       +   SPD + + 
Sbjct: 154 SPIFLIDISSGDVTQISTDDASYSNVLVSPDGNTLY 189


>gi|313681055|ref|YP_004058794.1| peptidase s9, prolyl oligopeptidase active site region
           [Oceanithermus profundus DSM 14977]
 gi|313153770|gb|ADR37621.1| peptidase S9, prolyl oligopeptidase active site region
           [Oceanithermus profundus DSM 14977]
          Length = 600

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 72/218 (33%), Gaps = 17/218 (7%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + +A+  +  + +  V+      D A +R+           F   G   L      +
Sbjct: 24  PSGRALAWTWFGRDPVPHVWARTP--DGAVRRLSEGDEKSYLAGFLPGGAGVLYETDPGD 81

Query: 281 AMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDRE---GKEQ----LYVM 331
                       A  RLT  +  +        P+   +VF ++ +   G       ++  
Sbjct: 82  ERTALWARPWDGAPRRLTEAHPPYFLRGGELHPERPWLVFGANYDFERGAPLEPTWIWRR 141

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVED 389
                + + +++ +    + P  SP G  + + +         + V+  DG  ER LV  
Sbjct: 142 DLETGELRALARPERPGTWAPQLSPDGRWVLYDRATRHPAGQELWVVGSDGLGERALVSA 201

Query: 390 SNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              +     W+  G  + +  + DG        ++  G
Sbjct: 202 GEERKVHGLWA--GARVNYVAEADGTRVWAWCDLEGGG 237



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 65/197 (32%), Gaps = 14/197 (7%)

Query: 261 LAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              R   +G+    +   +D    +++      A  RL+     +  A + P  + +++E
Sbjct: 18  FGARLEPSGRALAWTWFGRDPVPHVWARTPDG-AVRRLSEGDEKSYLAGFLPGGAGVLYE 76

Query: 320 SDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSG-------EKF 371
           +D   +      +      +R+++             P+   + F            E  
Sbjct: 77  TDPGDERTALWARPWDGAPRRLTEAHPPYFLRGGELHPERPWLVFGANYDFERGAPLEPT 136

Query: 372 AIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            I     +  + R L   E     AP  SP GR +++ R      G +L+ +  +G  E 
Sbjct: 137 WIWRRDLETGELRALARPERPGTWAPQLSPDGRWVLYDRATRHPAGQELWVVGSDGLGER 196

Query: 430 LINTPAYAS--DPQWVG 444
            + +          W G
Sbjct: 197 ALVSAGEERKVHGLWAG 213



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 64/229 (27%), Gaps = 51/229 (22%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATY 231
           F      V      G  + +L     DGA  R         L      P +  + + A Y
Sbjct: 66  FLPGGAGVLYETDPGDERTALWARPWDGAPRRLTEAHPPYFLRGGELHPERPWLVFGANY 125

Query: 232 DDED-----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           D E         ++  D             R    AP+ S +G+  L             
Sbjct: 126 DFERGAPLEPTWIWRRDLETGELRALARPERPGTWAPQLSPDGRWVLYD----------- 174

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                    R T                           ++L+V+ S+G  ++ +    E
Sbjct: 175 ---------RATRHPA----------------------GQELWVVGSDGLGERALVSAGE 203

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                 +W+  G  + +   +           +G    LL ED++L+ P
Sbjct: 204 ERKVHGLWA--GARVNYVAEADGTRVWAWCDLEGGGGVLL-EDAHLEHP 249


>gi|298492347|ref|YP_003722524.1| serine/threonine protein kinase ['Nostoc azollae' 0708]
 gi|298234265|gb|ADI65401.1| serine/threonine protein kinase with WD40 repeats ['Nostoc azollae'
           0708]
          Length = 687

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 88/239 (36%), Gaps = 15/239 (6%)

Query: 170 KGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           K D  S I   S++  ++   KN + + + +      +     Q +     SP+ + +  
Sbjct: 395 KNDLVSSIAISSDNKTIASSGKNLIKLWNMNTGQQISVLKGHTQKVNVVAISPDGKTLVS 454

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D      + +      +    +     ++ A   S +GK  + S   D+ + ++  +
Sbjct: 455 GSDD----YTIKIWKLSTKKVIHTLNIHTDVVHAVAISKDGKTLV-SASDDKTIKVW--N 507

Query: 289 LQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           L +    R L    +   S + SP++  +   S     + + +                 
Sbjct: 508 LGTGKLIRTLKGHSYWVRSVAISPNNFTLASGSF---DKTIKLWNLTQEKPIHTLTPNSQ 564

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
           +     +SP G ++A       K  +  +   G + R L  +D+N+ +  +S  G++L+
Sbjct: 565 TVTSLAFSPDGKILASASRD-RKIKLWNI-GTGKEIRTLAGQDNNVTSLAFSHDGKTLV 621



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 78/234 (33%), Gaps = 22/234 (9%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           ++ ++     S + + +A           + L +    +    +      +     S +G
Sbjct: 395 KNDLVSSIAISSDNKTIA-----SSGKNLIKLWNMNTGQQISVLKGHTQKVNVVAISPDG 449

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESDREGK 325
           K  + S   D  + I+ +     +T+++ +TL I+       + S D   +V  SD    
Sbjct: 450 KTLV-SGSDDYTIKIWKL-----STKKVIHTLNIHTDVVHAVAISKDGKTLVSASD---D 500

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + V         R  +           SP    +A   F  +   +  + ++     L
Sbjct: 501 KTIKVWNLGTGKLIRTLKGHSYWVRSVAISPNNFTLASGSFD-KTIKLWNLTQEKPIHTL 559

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                 + +  +SP G+ L  + +   D   KL++I       TL       + 
Sbjct: 560 TPNSQTVTSLAFSPDGKILASASR---DRKIKLWNIGTGKEIRTLAGQDNNVTS 610



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 66/200 (33%), Gaps = 15/200 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++VS     ++ V +     +          +     SPN   +A  ++D      + L
Sbjct: 492 KTLVSASDDKTIKVWNLGTGKLIRTLKGHSYWVRSVAISPNNFTLASGSFDK----TIKL 547

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +   ++    +      + +  FS +GK  L S  +D  + ++  ++ +    R     
Sbjct: 548 WNLTQEKPIHTLTPNSQTVTSLAFSPDGK-ILASASRDRKIKLW--NIGTGKEIRTLAGQ 604

Query: 302 FIN-ISASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             N  S ++S D   +V  +      D   K  + +      ++         +     +
Sbjct: 605 DNNVTSLAFSHDGKTLVSGNRNCMECDYSIKSNIKLWDVATGEELAPFTKNTNTVTSLAF 664

Query: 355 SPQGDLIAFTKFSGEKFAIG 374
           S  G  I  +     K  + 
Sbjct: 665 SADGK-ILVSGEENNKIKVW 683


>gi|209524342|ref|ZP_03272891.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
 gi|209495133|gb|EDZ95439.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
          Length = 673

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 83/236 (35%), Gaps = 12/236 (5%)

Query: 173 FNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           + + I F  +     SG    ++ + D       Y        + +  FSP    +A A+
Sbjct: 430 WVTSIAFSPKEEILASGSRDQTVEIWDLKKGKRWYTLIGHQDAVEQVAFSPQGDILASAS 489

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D      + + D +  +    +      I    FS +G+    S  +D+ + ++  +LQ
Sbjct: 490 RDK----TIQIWDLKKGKPSYTLYGHSDRIYGLAFSPDGQTLA-SASRDKTVRLW--NLQ 542

Query: 291 SNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                  L        + ++SP+   +     R+G   L+  Q       R  +  +A  
Sbjct: 543 QRQELGSLPRWSDWVRTVAFSPNGQMLA-GGCRDGSIGLWHQQDQTWKLWRTLRADDADI 601

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           F   + P    +  T  S  +  I  +      E +    +++ +  +S  G+++ 
Sbjct: 602 FAIAFKPDSTELI-TGNSKGQIDIWQLGDGTLLETIAAHSADVLSLAFSLDGKTIA 656



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 65/169 (38%), Gaps = 9/169 (5%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +   R+ +    FS + +  L S  +D  ++I+ +         LT       S ++SP 
Sbjct: 382 LTGHRNQVTCVAFSPD-QEILASSSQDLTIEIWRL-KNGKRWYTLTGHENWVTSIAFSPK 439

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +   S R+   +++        +       + +     +SPQGD++A      +   
Sbjct: 440 EEILASGS-RDQTVEIW--DLKKGKRWYTLIGHQDAVEQVAFSPQGDILASASRD-KTIQ 495

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           I  +KK      L      +    +SP G++L  + +   D   +L+++
Sbjct: 496 IWDLKKGKPSYTLYGHSDRIYGLAFSPDGQTLASASR---DKTVRLWNL 541



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/262 (16%), Positives = 82/262 (31%), Gaps = 33/262 (12%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     +WD+K  K    + +         I H   D + Q     +GD       
Sbjct: 444 ASGSRDQTVEIWDLKKGK----RWYT-------LIGHQ--DAVEQVAFSPQGDIL----- 485

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                 S     ++ + D       Y        ++   FSP+ Q +A A+ D      V
Sbjct: 486 -----ASASRDKTIQIWDLKKGKPSYTLYGHSDRIYGLAFSPDGQTLASASRDK----TV 536

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L + +  +    +  +   +    FS NG+       +D ++ ++    Q+    R   
Sbjct: 537 RLWNLQQRQELGSLPRWSDWVRTVAFSPNGQMLA-GGCRDGSIGLWHQQDQTWKLWRTLR 595

Query: 300 TLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               +I A ++ PDS++++       K Q+ + Q              A      +S  G
Sbjct: 596 ADDADIFAIAFKPDSTELI---TGNSKGQIDIWQLGDGTLLETIAAHSADVLSLAFSLDG 652

Query: 359 DLIAFTKFSGEKFAIGVMKKDG 380
             IA +  S     I       
Sbjct: 653 KTIA-SGGSDRLVKIWYHAAQT 673


>gi|108808989|ref|YP_652905.1| hypothetical protein YPA_2998 [Yersinia pestis Antiqua]
 gi|108813891|ref|YP_649658.1| hypothetical protein YPN_3731 [Yersinia pestis Nepal516]
 gi|145597334|ref|YP_001161409.1| hypothetical protein YPDSF_0010 [Yersinia pestis Pestoides F]
 gi|229839794|ref|ZP_04459953.1| hypothetical protein YPH_2116 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229841878|ref|ZP_04462034.1| hypothetical protein YPF_0203 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229896756|ref|ZP_04511920.1| hypothetical protein YPS_4592 [Yersinia pestis Pestoides A]
 gi|229904417|ref|ZP_04519528.1| hypothetical protein YP516_4243 [Yersinia pestis Nepal516]
 gi|270488355|ref|ZP_06205429.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294505615|ref|YP_003569677.1| hypothetical protein YPZ3_3506 [Yersinia pestis Z176003]
 gi|108777539|gb|ABG20058.1| conserved hypothetical protein [Yersinia pestis Nepal516]
 gi|108780902|gb|ABG14960.1| conserved hypothetical protein [Yersinia pestis Antiqua]
 gi|145209030|gb|ABP38437.1| conserved hypothetical protein [Yersinia pestis Pestoides F]
 gi|229678535|gb|EEO74640.1| hypothetical protein YP516_4243 [Yersinia pestis Nepal516]
 gi|229691217|gb|EEO83270.1| hypothetical protein YPF_0203 [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229696160|gb|EEO86207.1| hypothetical protein YPH_2116 [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229700295|gb|EEO88330.1| hypothetical protein YPS_4592 [Yersinia pestis Pestoides A]
 gi|262363779|gb|ACY60500.1| hypothetical protein YPD4_3598 [Yersinia pestis D106004]
 gi|262367716|gb|ACY64273.1| hypothetical protein YPD8_3605 [Yersinia pestis D182038]
 gi|270336859|gb|EFA47636.1| conserved hypothetical protein [Yersinia pestis KIM D27]
 gi|294356074|gb|ADE66415.1| hypothetical protein YPZ3_3506 [Yersinia pestis Z176003]
 gi|320017417|gb|ADW00989.1| hypothetical protein YPC_4608 [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 104

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 10/108 (9%)

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           D  G  QL+++  NG + ++++  +        WSPQG+ +AF   +    ++ +     
Sbjct: 3   DDNGVVQLWLISPNGGELRQLTASQWGIQSAFSWSPQGEHLAFICDN----SVMLCDSLT 58

Query: 381 SQERLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              R L   S       A  +SP+G+ + F R+ DG   ++++++  +
Sbjct: 59  GHLRRLTARSVVAPLADAVVFSPNGKKIAFMREIDG--WAQIFTVHAD 104



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 41/106 (38%), Gaps = 7/106 (6%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           DD  +++++L+        +   +   +  A  +S  G+             +   D  +
Sbjct: 3   DDNGVVQLWLISPNGGELRQLTASQWGIQSAFSWSPQGEHLAFICDNS----VMLCDSLT 58

Query: 292 NATERLTNTLFI---NISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               RLT    +     +  +SP+  +I F  + +G  Q++ + ++
Sbjct: 59  GHLRRLTARSVVAPLADAVVFSPNGKKIAFMREIDGWAQIFTVHAD 104



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 7/101 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++  +G  +R LT S+  I     +SP  + +A+   +      V L D+      +
Sbjct: 9   QLWLISPNGGELRQLTASQWGIQSAFSWSPQGEHLAFICDN-----SVMLCDSLTGHLRR 63

Query: 252 RIGN--FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                    +  A  FS NGK+     + D    I++V   
Sbjct: 64  LTARSVVAPLADAVVFSPNGKKIAFMREIDGWAQIFTVHAD 104


>gi|37676589|ref|NP_936985.1| hypothetical protein VVA0929 [Vibrio vulnificus YJ016]
 gi|37201132|dbj|BAC96955.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
          Length = 963

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 8/141 (5%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEAS-YFDPVWSPQGDLI-A 362
           SA + PD  + +      G  +L++M +   +  ++I Q            S  G  I A
Sbjct: 423 SAKWLPDGQRYLATRKVNGLSELWLMDAQQPESGQQIWQGTIGDVLGGFAVSHDGRFIVA 482

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             K S E + +        Q   L +   ++ +P ++P G  ++FS   DG     +YS+
Sbjct: 483 SVKRSSEGWNLEKFDLAALQWTPLTQSRAVENSPAFTPDGE-VLFSADYDG--VFNIYSL 539

Query: 422 D-LNGRNETLINTPAYASDPQ 441
           D ++G  + L      A  PQ
Sbjct: 540 DIVSGEIKQLTREVGGAFTPQ 560



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 67/170 (39%), Gaps = 16/170 (9%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIK----NSLCVMDRDG--ANIRYLTPSRDQI 213
           DD +Q++T EK  F S              K    + L +MD     +  +    +   +
Sbjct: 409 DDRWQALT-EKQRFRSAKWLPDGQRYLATRKVNGLSELWLMDAQQPESGQQIWQGTIGDV 467

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           L     S + + +  +     +   +   D    +    +   R++  +P F+ +G   L
Sbjct: 468 LGGFAVSHDGRFIVASVKRSSEGWNLEKFDLAALQ-WTPLTQSRAVENSPAFTPDG-EVL 525

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ---IVFES 320
            S   D   +IYS+D+ S   ++LT      +  +++P + +    V++S
Sbjct: 526 FSADYDGVFNIYSLDIVSGEIKQLTR----EVGGAFTPQTRRDSGFVYQS 571


>gi|332706036|ref|ZP_08426108.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332355128|gb|EGJ34596.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 659

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 70/236 (29%), Gaps = 15/236 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    ++   FSP+ + +A    D    L        I           + + A  
Sbjct: 369 TTLNGHSDEIYSVAFSPDGRTLASGCRDKTIKLWELKTAWEILTFGGWFSKHSAEVRAVA 428

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDRE 323
           FS  GK    S   DE + +++V          T       S ++ P    +    SDR 
Sbjct: 429 FSPQGKSLA-SGSADETIKLWNV-RNGKEIFTFTGHSGDVNSIAFHPQGYHLASGASDRT 486

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + +       Q        +      + P G ++A          I +      QE
Sbjct: 487 ----IKLWDVRTLKQLTTLTGHSSLINSVAFRPDGQILASGSADAT---IKLWDALSGQE 539

Query: 384 RLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               E  + Q  A  ++P+G++L        D   KL+ I       TL     + 
Sbjct: 540 IHTFEGHSDQVLAIAFTPNGQTLA---SASADGTIKLWDISTAQEITTLNGHNGWV 592



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 79/229 (34%), Gaps = 20/229 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +S+ SG    ++ + +       +        +    F P    +A    D      + L
Sbjct: 434 KSLASGSADETIKLWNVRNGKEIFTFTGHSGDVNSIAFHPQGYHLASGASDR----TIKL 489

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D R  +    +    S+I +  F  +G + L S   D  + ++  D  S          
Sbjct: 490 WDVRTLKQLTTLTGHSSLINSVAFRPDG-QILASGSADATIKLW--DALSGQEIHTFEGH 546

Query: 302 FINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--G 358
              + A +++P+   +   S  +G  +L+    + S  + I+     + +    +    G
Sbjct: 547 SDQVLAIAFTPNGQTLASAS-ADGTIKLW----DISTAQEITTLNGHNGWVYAIAFDRSG 601

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
            ++A          I +   D +QE   +   +    A  + P+ R+L 
Sbjct: 602 QILASGSADTT---IKLWDVDTTQEIGTLNGHSDTIHALAFGPNNRTLA 647


>gi|159896636|ref|YP_001542883.1| WD-40 repeat-containing protein [Herpetosiphon aurantiacus ATCC
            23779]
 gi|159889675|gb|ABX02755.1| WD-40 repeat protein [Herpetosiphon aurantiacus ATCC 23779]
          Length = 1209

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 71/197 (36%), Gaps = 12/197 (6%)

Query: 217  PRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            P+ + N +++AY              + L D +  +    +   +++I A  F  +G   
Sbjct: 928  PQATNNGRELAYHQASQLLAISQEQVIQLWDCQRLQLATILTGHQALIRAIAFRPDGSML 987

Query: 273  LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVM 331
              S  +D  + ++S+       +       +  + ++S + S +   S DR     + + 
Sbjct: 988  A-SCSEDHTVHVWSMPH-GQIVQVFGCHDDLVTTLAWSQNGSLLATGSADRT----IRIW 1041

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                     +     A      +SP    +  +  + ++  I  +     +  LL +   
Sbjct: 1042 GVAEHSCLSLLAGHSAGIISLAFSPDQRHLV-SAGADQQVRIWDLSNQCYEIVLLHKPGL 1100

Query: 392  LQAPTWSPSGRSLIFSR 408
            L+A  WS  GR ++ + 
Sbjct: 1101 LKAVQWSADGRWIVIAA 1117



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 64/201 (31%), Gaps = 12/201 (5%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             +      ++    F P+   +A  + D      V++      +  +  G    ++    
Sbjct: 966  TILTGHQALIRAIAFRPDGSMLASCSEDH----TVHVWSMPHGQIVQVFGCHDDLVTTLA 1021

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +S NG     +   D  + I+ V  + +    L       IS ++SPD   +V       
Sbjct: 1022 WSQNGSLLA-TGSADRTIRIWGV-AEHSCLSLLAGHSAGIISLAFSPDQRHLV---SAGA 1076

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             +Q+ +   +    + +   K        WS  G  I     +G    I   +      +
Sbjct: 1077 DQQVRIWDLSNQCYEIVLLHKPGLLKAVQWSADGRWIVIA--AGSLALIWDWQNQ-QLVQ 1133

Query: 385  LLVEDSNLQAPTWSPSGRSLI 405
                 + + +   S  G  LI
Sbjct: 1134 RFEHQAAVDSICLSSDGHMLI 1154



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 62/162 (38%), Gaps = 10/162 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G    ++ +      +   L       +    FSP+Q+ +  A  D     +V + D  
Sbjct: 1031 TGSADRTIRIWGVAEHSCLSLLAGHSAGIISLAFSPDQRHLVSAGADQ----QVRIWDLS 1086

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                   + +   ++ A ++S++G+  +I+     ++ +   D Q+    +         
Sbjct: 1087 NQCYEIVLLHKPGLLKAVQWSADGRWIVIAA---GSLALIW-DWQNQQLVQRFEHQAAVD 1142

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            S   S D   ++   D++G   ++ + + G   K++  D+  
Sbjct: 1143 SICLSSDGHMLI-TGDQQGAIAIWQL-ATGKLLKKLHSDRPY 1182


>gi|13472512|ref|NP_104079.1| WD-repeart protein, beta transducin-like [Mesorhizobium loti
            MAFF303099]
 gi|14023258|dbj|BAB49865.1| WD-repeart protein, beta transducin-like [Mesorhizobium loti
            MAFF303099]
          Length = 1430

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 81/215 (37%), Gaps = 18/215 (8%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
               +I+    FSP+ + VA A+       +V + +        +  +   +I   +F  +
Sbjct: 1104 DTHEIVQTATFSPDGKHVATASLGG----QVRIWEIARGVETAQFQSHGGLIQI-QFGRD 1158

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDREGKEQ 327
            GK  + S   D    ++  D  + A   + +T      A  SPD   I     D  G   
Sbjct: 1159 GKSLV-SASIDGTAQLW--DAATGAELAVIDTSSKLPQAILSPDGRLILAAREDNSG--- 1212

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
             ++++++G++ K +            ++P G L+A          I       S   L  
Sbjct: 1213 -HLLKADGAELKALV-GHRDRITAAAFNPNGQLVATGSRDHTA-RIWSTADGASVLTLEG 1269

Query: 388  EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                +    +SP G+SL+ + +   D   +++S+ 
Sbjct: 1270 HTGEVTVVAFSPDGQSLLTASR---DRTVRIWSVS 1301



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 61/316 (19%), Positives = 105/316 (33%), Gaps = 37/316 (11%)

Query: 130  LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            L DV    +I       S      +   I     Q I     D  +RI        SG +
Sbjct: 909  LLDVSKGTEIAKLVDQKSDTQLNGV---IFSHGGQRIATVSLDGAARIW----DGASGTL 961

Query: 190  KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
               L   +  G  +  +            FSP+ + +A A+ +      + + D      
Sbjct: 962  H-DLLGQEVSGLKLADIGADERDEEMNGAFSPDDRFLATASVNGP----IRIWDVERASL 1016

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
               I    S++    FS      L++   D    ++ VD        LT TL      ++
Sbjct: 1017 VTTIAGHESLVEHLEFSPVDSNILLTASHDGTARLWDVDGA------LTTTLSHEYRPTF 1070

Query: 310  ---SPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               SPD+  ++      G    ++  + +G +  R+  D         +SP G  +A   
Sbjct: 1071 AVFSPDNVHLL---TGGGDSAAHLWDALSGREIIRL--DTHEIVQTATFSPDGKHVATAS 1125

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-------TGSKL 418
              G +  I  +   G +         L    +   G+SL+ S   DG        TG++L
Sbjct: 1126 L-GGQVRIWEI-ARGVETAQFQSHGGLIQIQFGRDGKSLV-SASIDGTAQLWDAATGAEL 1182

Query: 419  YSIDLNGRNETLINTP 434
              ID + +    I +P
Sbjct: 1183 AVIDTSSKLPQAILSP 1198



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 53/358 (14%), Positives = 124/358 (34%), Gaps = 53/358 (14%)

Query: 83   SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
              D       + +  P F  ++     +L  G               LWD    ++II  
Sbjct: 1053 DVDGALTTTLSHEYRPTFAVFSPDNVHLLTGGGDSAA---------HLWDALSGREII-- 1101

Query: 143  KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
                     R   H    +I Q+ T     F+     V+ + + G ++  +  + R    
Sbjct: 1102 ---------RLDTH----EIVQTAT-----FSPDGKHVATASLGGQVR--IWEIARGVET 1141

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             ++ +      L + +F  + + +  A+ D        L D         I     +  A
Sbjct: 1142 AQFQSHGG---LIQIQFGRDGKSLVSASIDG----TAQLWDAATGAELAVIDTSSKLPQA 1194

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
               S +G+  L + + +     + +       + L        +A+++P+  Q+V    R
Sbjct: 1195 -ILSPDGRLILAAREDNSG---HLLKADGAELKALVGHRDRITAAAFNPNG-QLVATGSR 1249

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            +   +++   ++G+    + +          +SP G  +           + +    G  
Sbjct: 1250 DHTARIWST-ADGASVLTL-EGHTGEVTVVAFSPDGQSLLTASRDRT---VRIWSVSGGL 1304

Query: 383  ERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            ER ++    S + +  +SP+G  L+ +  +  D   +L++   +GR   ++ +   A+
Sbjct: 1305 ERAVLRGHSSAVDSAQFSPNGLYLVTASSE--DRTVRLWAT-QSGRQIAVLASQDEAT 1359



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 64/188 (34%), Gaps = 15/188 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+ +   +  A+YD        + D         +      +    FS +G R L +  
Sbjct: 722 AFNSSGDHIVTASYDKTAG----VWDISSGAETAVLKGHEGTVERAEFSRDGNRIL-TAA 776

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D    ++  +  S     +   +    +A +SP+ +Q V  +       L+    +   
Sbjct: 777 RDGTARVW--NAISGQQLFILQPVGDYPTAIFSPNGNQ-VLTAGENSDAALW----DART 829

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            K+I       Y    +S  G    F        +I     DG+  R +  +S   +  +
Sbjct: 830 GKKIVSVSSGGYARAGFSSDGRS--FATARKHSVSIW-NSADGALTRSIRVNSRPYSLAF 886

Query: 398 SPSGRSLI 405
           SP G  L+
Sbjct: 887 SPDGSRLL 894



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 81/222 (36%), Gaps = 26/222 (11%)

Query: 103  W-NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI-AHTISD 160
            W  + GA++ V     K  +  L  + RL  +  R+   G    +  A  + +  H   D
Sbjct: 1174 WDAATGAELAVIDTSSKLPQAILSPDGRLI-LAAREDNSGHLLKADGAELKALVGHR--D 1230

Query: 161  DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRF 219
             I  +     G          + V +G   ++  +    DGA++  L     ++     F
Sbjct: 1231 RITAAAFNPNG----------QLVATGSRDHTARIWSTADGASVLTLEGHTGEVTVV-AF 1279

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+ Q +  A+ D      V +           +    S + + +FS NG   + +  +D
Sbjct: 1280 SPDGQSLLTASRDR----TVRIWSVSGGLERAVLRGHSSAVDSAQFSPNGLYLVTASSED 1335

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              + ++     + +  ++   L     A+  P  ++  F SD
Sbjct: 1336 RTVRLW----ATQSGRQI-AVLASQDEATVRPSLTRAAFSSD 1372



 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 78/204 (38%), Gaps = 16/204 (7%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTN 299
           L    +     +I    + +    F+S+G   + +   D+   ++  D+ S A    L  
Sbjct: 699 LYKALLSHHQIKIFRHAAGVADAAFNSSGDHIV-TASYDKTAGVW--DISSGAETAVLKG 755

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                  A +S D ++I+  + R+G  +++   +  S Q+         Y   ++SP G+
Sbjct: 756 HEGTVERAEFSRDGNRIL-TAARDGTARVW---NAISGQQLFILQPVGDYPTAIFSPNGN 811

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK-----DGDT 414
            +     +GE     +      ++ + V         +S  GRS   +RK      +   
Sbjct: 812 QVL---TAGENSDAALWDARTGKKIVSVSSGGYARAGFSSDGRSFATARKHSVSIWNSAD 868

Query: 415 GSKLYSIDLNGRNETLINTPAYAS 438
           G+   SI +N R  +L  +P  + 
Sbjct: 869 GALTRSIRVNSRPYSLAFSPDGSR 892



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 8/100 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +S+++     ++ +    G   R +       +   +FSPN   +  A+ +D     V L
Sbjct: 1284 QSLLTASRDRTVRIWSVSGGLERAVLRGHSSAVDSAQFSPNGLYLVTASSEDR---TVRL 1340

Query: 242  MDTRIDRAPKRIGNFRSMILAP-----RFSSNGKRALISV 276
              T+  R    + +     + P      FSS+G R  I  
Sbjct: 1341 WATQSGRQIAVLASQDEATVRPSLTRAAFSSDGTRVAIIS 1380


>gi|163732642|ref|ZP_02140087.1| WD repeat protein [Roseobacter litoralis Och 149]
 gi|161394002|gb|EDQ18326.1| WD repeat protein [Roseobacter litoralis Och 149]
          Length = 442

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 56/268 (20%), Positives = 104/268 (38%), Gaps = 33/268 (12%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            VVS     S+ +     + +R L     +++     +P+ Q VA A++D    +R++ +
Sbjct: 92  QVVSAGDDYSVRLWSPQNSTVRELGRHNAKVIRLAA-APDGQSVASASWD--RTVRIWPI 148

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLT-NT 300
           D     AP  I    + +    FS +G R   +   D  + ++  D Q+ A  +RL  + 
Sbjct: 149 D---GAAPVLIEGHDNTVSDVAFSPDGTRL-YTSSADGTIRVW--DAQTGAFLKRLVEHG 202

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             IN     +PD S + + +   G   + +    G +    + D+         S + D 
Sbjct: 203 FGINT-LLVAPDESWLAYGAVDGGTRLVSL--PEGVEIGDFTADRRPILAMAH-SDKTDR 258

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           IA     G      +M  D S  R+           + A  +SP G+++       G   
Sbjct: 259 IAIGDAQG-----YIMMIDSSALRITDDFQATPAGPVWALAFSPDGQNI-----HAGGIS 308

Query: 416 SKLYSI---DLNGRNETLINTPAYASDP 440
             ++S     L+G  +    T A+ +DP
Sbjct: 309 DVVHSWPVGSLDGAEQMTGTTRAFMTDP 336


>gi|34541047|ref|NP_905526.1| dipeptidyl aminopeptidase IV [Porphyromonas gingivalis W83]
 gi|81417236|sp|Q7MUW6|PTP_PORGI RecName: Full=Prolyl tripeptidyl peptidase; Short=PTP; AltName:
           Full=Prolyl tripeptidyl peptidase 81.8 kDa form;
           AltName: Full=Prolyl tripeptidyl peptidase A; Contains:
           RecName: Full=Prolyl tripeptidyl peptidase 75.8 kDa
           form; Flags: Precursor
 gi|34397362|gb|AAQ66425.1| dipeptidyl aminopeptidase IV, putative [Porphyromonas gingivalis
           W83]
          Length = 732

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 91/276 (32%), Gaps = 50/276 (18%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANI----RYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           L+++     G   +    +  DG       + +      I     +SP    +A+   D 
Sbjct: 169 LYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ 228

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPR----------------------------- 264
             +    ++D     A  +   +  M   P                              
Sbjct: 229 SMVKPTPIVDYHPLEAESKPLYYP-MAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT 287

Query: 265 ---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----SA----SYSPD 312
              +S + +  L   + + A +   V+     T R   TLF+             ++ P 
Sbjct: 288 NLSWSPD-ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPG 346

Query: 313 SS-QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGE 369
           S+ Q +++S R+G   LY+  + G   +++++ +        + P+G  + F     S  
Sbjct: 347 SNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPL 406

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +     +   G + + L  +S +     SP G ++I
Sbjct: 407 ERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAII 442



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 57/169 (33%), Gaps = 17/169 (10%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEP--- 217
           + +T      +  IL+V+E       +N   V   D   G  +R L    D+   EP   
Sbjct: 284 KFLTNLSWSPDENILYVAEV---NRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 340

Query: 218 -RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALIS 275
             F P      +      D      +     R  +++      +     F   G R    
Sbjct: 341 LTFLP-GSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFE 399

Query: 276 VQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--VFES 320
             +        Y +D++   T+ LT    ++ +   SPD S I  +F+S
Sbjct: 400 STEASPLERHFYCIDIKGGKTKDLTPESGMHRT-QLSPDGSAIIDIFQS 447


>gi|67540430|ref|XP_663989.1| hypothetical protein AN6385.2 [Aspergillus nidulans FGSC A4]
 gi|40739217|gb|EAA58407.1| hypothetical protein AN6385.2 [Aspergillus nidulans FGSC A4]
 gi|259479391|tpe|CBF69571.1| TPA: transcriptional corepressor (Eurofung) [Aspergillus nidulans
           FGSC A4]
          Length = 434

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 84/283 (29%), Gaps = 42/283 (14%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD------------- 232
           SG    ++ + D     ++         +    FSPN Q +A  + D             
Sbjct: 58  SGSNDTTIKLWDPASGGLKQTLEGHSSSVQSVAFSPNGQLLASGSSDTTIKLWNSASDSL 117

Query: 233 ----DEDILRV---------YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
               +    RV          L +  I      I      +L+  FS +G+    S   +
Sbjct: 118 KHTMEGHSDRVESVAFSPNGQLWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLA-SGSAE 176

Query: 280 EAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           + + ++  D  +   +  L       +   +SPD   +   S+      + +        
Sbjct: 177 KTIKLW--DSATCGLKHTLGGHSNWVLPLVFSPDGRLLASGSN---DATIKLWDPPSGSL 231

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APT 396
           K   +          +SP G L+A          I +        R  ++  +    +  
Sbjct: 232 KHTLEGHSNKIESLAFSPNGQLLASGSSDAT---IKLWDTATGSFRHTLKGHSDMVLSVV 288

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +SP  + L       GD   KL+     G  +  + TP     
Sbjct: 289 FSPDSQLL---ESGSGDNTIKLWD-PATGILKHSMRTPGIVRS 327



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 75/259 (28%), Gaps = 49/259 (18%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    FSP+ + +A  + D      + L D       + +    S + +  
Sbjct: 35  QTLEGHSDWIETVTFSPDGRLLASGSNDT----TIKLWDPASGGLKQTLEGHSSSVQSVA 90

Query: 265 FSSNGKRAL-------------------------------ISVQKDEAMDIYSVDLQSNA 293
           FS NG+                                  ++   +  +   ++    + 
Sbjct: 91  FSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQLWNPAI---GSL 147

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              +       +S ++SPD   +   S    ++ + +  S     K             V
Sbjct: 148 KHTIEGHSDWVLSVAFSPDGQLLASGS---AEKTIKLWDSATCGLKHTLGGHSNWVLPLV 204

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKD 411
           +SP G L+A          I +        +  +E  +   ++  +SP+G+ L       
Sbjct: 205 FSPDGRLLASGSNDAT---IKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLA---SGS 258

Query: 412 GDTGSKLYSIDLNGRNETL 430
            D   KL+         TL
Sbjct: 259 SDATIKLWDTATGSFRHTL 277



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 49/167 (29%), Gaps = 24/167 (14%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
           ++       + +      I    FS +G+    S   D  + ++  D  S   ++ L   
Sbjct: 26  VEDNWGPELQTLEGHSDWIETVTFSPDGRLLA-SGSNDTTIKLW--DPASGGLKQTLEGH 82

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SP+   +   S       + +  S     K   +          +SP G  
Sbjct: 83  SSSVQSVAFSPNGQLLASGSS---DTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQ- 138

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
                         +        +  +E  +    +  +SP G+ L 
Sbjct: 139 --------------LWNPAIGSLKHTIEGHSDWVLSVAFSPDGQLLA 171



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 47/125 (37%), Gaps = 7/125 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D    ++++        +    FSPN Q +A  + D      + L DT 
Sbjct: 214 SGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDA----TIKLWDTA 269

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +     M+L+  FS +  + L S   D  + ++  D  +   +    T  I  
Sbjct: 270 TGSFRHTLKGHSDMVLSVVFSPD-SQLLESGSGDNTIKLW--DPATGILKHSMRTPGIVR 326

Query: 306 SASYS 310
           S  +S
Sbjct: 327 SIEFS 331


>gi|312197975|ref|YP_004018036.1| hypothetical protein FraEuI1c_4165 [Frankia sp. EuI1c]
 gi|311229311|gb|ADP82166.1| WD40 repeat, subgroup [Frankia sp. EuI1c]
          Length = 512

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 54/346 (15%), Positives = 100/346 (28%), Gaps = 41/346 (11%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG----KDRLRVEFRLWDV-- 133
           N        Q +  P +   F    +     + +      G       L    +LWDV  
Sbjct: 40  NPAGPTPLGQPLVGPANPTPFGQPRAGPTDAVNSVAFSPNGHTLAAGGLDATVQLWDVTE 99

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
             R + +G        S   +A   + D     T   G  ++R+     +V +      L
Sbjct: 100 AARARPLGTPLTGPVHSVTSVA--FAPD---GRTLAAGSADTRVW--RWNVTNPARPTPL 152

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             +D                +    FSPN   +A    DD   L      T        +
Sbjct: 153 NPLD-----------GPAGAVTSVAFSPNGHTLALGGSDDAVWLWSVTNPTSPTPLGTPL 201

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASYSP 311
                 + +  FS +G     +   D+ + +++V       A + L        S ++SP
Sbjct: 202 IGPSDAVASVAFSPDGHTLA-AGSSDDKVWLWNVSNPANPTALDPLAGHTGSAFSVAFSP 260

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKR-----------ISQDKEASYFDPVWSPQGDL 360
           D   +          +L+      +   R                    +   +SP G  
Sbjct: 261 DGHALAAAGLS--TVRLWQSPLPTNAPPRSVASTQVPLGQPLTGPTRDVYSVAFSPDGHT 318

Query: 361 IAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLI 405
           +A     G  +   V      +     + +  + +  +SP GR+L 
Sbjct: 319 LAGGSADGTVWLCDVTNPARPAPLGQPLPNGVVFSVAFSPDGRTLA 364



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 68/202 (33%), Gaps = 16/202 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--RSMILAPRFSSNGKRALIS 275
            FSP+   +A  + D      V+L D      P  +G      ++ +  FS +G+     
Sbjct: 311 AFSPDGHTLAGGSADG----TVWLCDVTNPARPAPLGQPLPNGVVFSVAFSPDGRTLAAG 366

Query: 276 VQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ-S 333
            Q    +   +         R LT       S ++SPD  ++   S       +++   +
Sbjct: 367 SQDTVGLWNVTNPASPTPLGRPLTGPTGQVRSVAFSPDGQRLAAGSGAS----VWLWNVA 422

Query: 334 NGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVED 389
           + +    +     A +     +SP G  +A      E +   V          + +    
Sbjct: 423 DPTRPISLRVPSYAPTVNSVAFSPDGHTLAAGSGDDEVWLWNVTDPASLTPLGQPVTGPH 482

Query: 390 SNLQAPTWSPSGRSLIFSRKKD 411
           S + +  +SP G +L      D
Sbjct: 483 SGVNSVAFSPDGHTLAAGSTDD 504



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 90/279 (32%), Gaps = 35/279 (12%)

Query: 182 ESVVSGIIKNSLCVMD-RDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATYDDEDILR 238
            ++ +G   + + + +  + AN   L P        F   FSP+   +A A       +R
Sbjct: 218 HTLAAGSSDDKVWLWNVSNPANPTALDPLAGHTGSAFSVAFSPDGHALAAAGL---STVR 274

Query: 239 VYLMDTRIDRAPKRIGNFR-----------SMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           ++      +  P+ + + +             + +  FS +G         D  + +  V
Sbjct: 275 LWQSPLPTNAPPRSVASTQVPLGQPLTGPTRDVYSVAFSPDGHTLA-GGSADGTVWLCDV 333

Query: 288 DLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
              +      + L N   +  S ++SPD   +   S            ++ +   R    
Sbjct: 334 TNPARPAPLGQPLPN--GVVFSVAFSPDGRTLAAGSQDTVGLWNVTNPASPTPLGRPLTG 391

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS----QERLLVEDSNLQAPTWSPS 400
                    +SP G  +A    +G   ++ +            R+      + +  +SP 
Sbjct: 392 PTGQVRSVAFSPDGQRLA----AGSGASVWLWNVADPTRPISLRVPSYAPTVNSVAFSPD 447

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           G +L       GD    L+++  +  + T +  P     
Sbjct: 448 GHTLAAGS---GDDEVWLWNV-TDPASLTPLGQPVTGPH 482



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 58/164 (35%), Gaps = 11/164 (6%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           + ++F   FSP+ + +A  + D   +  V           + +      + +  FS +G+
Sbjct: 348 NGVVFSVAFSPDGRTLAAGSQDTVGLWNV-TNPASPTPLGRPLTGPTGQVRSVAFSPDGQ 406

Query: 271 RALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           R         ++ +++V   +     R+ +      S ++SPD   +   S   G ++++
Sbjct: 407 RLA--AGSGASVWLWNVADPTRPISLRVPSYAPTVNSVAFSPDGHTLAAGS---GDDEVW 461

Query: 330 VMQSNG----SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +         +   +      +      +SP G  +A       
Sbjct: 462 LWNVTDPASLTPLGQPVTGPHSGVNSVAFSPDGHTLAAGSTDDT 505



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 45/124 (36%), Gaps = 3/124 (2%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYL-TPSRDQILFEPRFSPNQ 223
           +TG  G   S         ++     S+ + +  D      L  PS    +    FSP+ 
Sbjct: 389 LTGPTGQVRSVAFSPDGQRLAAGSGASVWLWNVADPTRPISLRVPSYAPTVNSVAFSPDG 448

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             +A  + DDE  L        +    + +    S + +  FS +G     +   D+ + 
Sbjct: 449 HTLAAGSGDDEVWLWNVTDPASLTPLGQPVTGPHSGVNSVAFSPDGHTLA-AGSTDDTVS 507

Query: 284 IYSV 287
           ++++
Sbjct: 508 LWTL 511


>gi|58039902|ref|YP_191866.1| dipeptidyl peptidase IV [Gluconobacter oxydans 621H]
 gi|58002316|gb|AAW61210.1| Dipeptidyl peptidase IV [Gluconobacter oxydans 621H]
          Length = 739

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 75/248 (30%), Gaps = 70/248 (28%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-------- 303
           R+       +APR S +G         D    +YSVDL S    RLT             
Sbjct: 148 RVTPIEGQWIAPRLSPDGLTLAAVRDND----LYSVDLVSGHETRLTTGGSDTLTHGLAE 203

Query: 304 ---------NISASYSPDSSQIVF----ESD----------------------REG---- 324
                       A +SPDS  I+F     SD                      R G    
Sbjct: 204 FAAAEELERADGAWWSPDSKTILFEEADNSDVEKHYITNPETPQTEPVSFRYPRAGTNNA 263

Query: 325 KEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGS 381
           K +  ++ + G   + IS D E        VW   G L +     +  +  +  +     
Sbjct: 264 KTRFGLVDAKGGPVRWISWDHETWPYLGRVVWRKNGPLAVVLLNRAQTQEQLLTIDPATG 323

Query: 382 QERLL--------------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              LL                      P +  +    +++  +  D   +L++ D  G+ 
Sbjct: 324 ATHLLLAQSDPAWIELDPRAASGGHSLPVFLANNAGFLWAADRGKDWQLELHAPD--GKL 381

Query: 428 ETLINTPA 435
           + ++  P+
Sbjct: 382 QRVLTPPS 389



 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 30/261 (11%), Positives = 74/261 (28%), Gaps = 52/261 (19%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFE------- 216
            +T  +G + +  L      ++ +  N L  +D   G   R  T   D +          
Sbjct: 148 RVTPIEGQWIAPRLSPDGLTLAAVRDNDLYSVDLVSGHETRLTTGGSDTLTHGLAEFAAA 207

Query: 217 --------PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                     +SP+ + + +   D+ D+ + Y+ +    +       +            
Sbjct: 208 EELERADGAWWSPDSKTILFEEADNSDVEKHYITNPETPQTEPVSFRYPR---------- 257

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----SYSPDSSQIVFESDRE 323
                 +   +       VD +      +  +             +  +    V   +R 
Sbjct: 258 ------AGTNNAKTRFGLVDAKGGPVRWI--SWDHETWPYLGRVVWRKNGPLAVVLLNRA 309

Query: 324 GKE-QLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLI----------AFTKFSGEK 370
             + QL  +         +    + ++   DP  +  G  +           +    G+ 
Sbjct: 310 QTQEQLLTIDPATGATHLLLAQSDPAWIELDPRAASGGHSLPVFLANNAGFLWAADRGKD 369

Query: 371 FAIGVMKKDGSQERLLVEDSN 391
           + + +   DG  +R+L   S 
Sbjct: 370 WQLELHAPDGKLQRVLTPPSL 390


>gi|281422181|ref|ZP_06253180.1| putative cytochrome c binding protein [Prevotella copri DSM 18205]
 gi|281403686|gb|EFB34366.1| putative cytochrome c binding protein [Prevotella copri DSM 18205]
          Length = 486

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 41/338 (12%), Positives = 97/338 (28%), Gaps = 50/338 (14%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
               ++           WR+      D        ++     R++     +         
Sbjct: 94  NRGGKLTIIVVAKKDGQWRQF--KPFDIFVDKQRMKEWGVTYRMVAPGYELYGMQGLFQR 151

Query: 194 CVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           C+ + D   I R        +      + N  +       ++    +           K 
Sbjct: 152 CLSNFDEFAIYRTTEVPGSCVNCHTANATNPDEFTLHIRGEKGATLIRHQGKDDWMKSKN 211

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK----------------DEAMDIYSVDLQSNAT-- 294
           +     M+  P +  +G+    S                   D + DI+  + +++    
Sbjct: 212 LEVGGPMVF-PCWHPSGRFIAFSTNDTQQYFHSQAKKRIEYFDMSSDIFIYNPETHEAMV 270

Query: 295 -ERLTNTLFINISASYSPDSSQIVFES---------DREGKEQLYVMQSN---GSDQKRI 341
             R      +     +SPD   + + +          RE +  L  +  +   G   + +
Sbjct: 271 DARFATKENLENCPVFSPDGKWLYYITAPFRDPKQHFRESRYSLCRVGFDAKTGKLSEMV 330

Query: 342 SQDKEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLLVED 389
                A     S   P  S  G  + FT      F+I        ++     +   L   
Sbjct: 331 DTLISAVALGKSITWPRPSYDGRYLMFTTLDYGYFSIWHPEADLWLLDLKTGKAYALDAA 390

Query: 390 SNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           ++  + +   WS SG   +F+ +++    +++Y   ++
Sbjct: 391 NSDDSDSFHNWSKSGGWYLFTSRREDGLYTRIYLASVD 428


>gi|126436142|ref|YP_001071833.1| peptidase S9 prolyl oligopeptidase [Mycobacterium sp. JLS]
 gi|126235942|gb|ABN99342.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Mycobacterium sp. JLS]
          Length = 666

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 23/237 (9%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L D  D + +  +         R  A  +SDD    +T  +       L           
Sbjct: 188 LLDAADGRDLTPR----PGGGLRDAAVDVSDDGSFLVTSWQNPSAGAAL----------- 232

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT----R 245
           +++L  ++        +       L  P  SP+ + +A+        L+   +       
Sbjct: 233 RDTLVRVEVGSGERTTVADDPGADLGHPAISPDGRMLAFTRETISTPLQAPRITLCCLHF 292

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +   ++     +  +S +G + +++   +    I+ +D  + A  +LT+      
Sbjct: 293 GGEVRELTAHWDRWPTSVTWSRDGAKLIVTADDNGRGPIFLIDPDTGAVTKLTDDDHTYT 352

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD----PVWSPQG 358
               +P         +         +  +G+     + D              +P G
Sbjct: 353 DVVTAPGGVLFAIRHNYAAPPHPVRIDPDGTVTVLPTVDAPRLPGTLSEITATAPDG 409



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 69/213 (32%), Gaps = 14/213 (6%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-----MDIYSVDL 289
              + +L+D    R             A   S +G   + S Q   A       +  V++
Sbjct: 182 GPDQPHLLDAADGRDLTPRPGGGLRDAAVDVSDDGSFLVTSWQNPSAGAALRDTLVRVEV 241

Query: 290 QSNATERLTNTLFINIS-ASYSPDSSQIVFE----SDREGKEQLYVMQSN-GSDQKRISQ 343
            S     + +    ++   + SPD   + F     S      ++ +   + G + + ++ 
Sbjct: 242 GSGERTTVADDPGADLGHPAISPDGRMLAFTRETISTPLQAPRITLCCLHFGGEVRELTA 301

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPSGR 402
             +       WS  G  +  T     +  I ++  D      L +D +       +P G 
Sbjct: 302 HWDRWPTSVTWSRDGAKLIVTADDNGRGPIFLIDPDTGAVTKLTDDDHTYTDVVTAPGG- 360

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            ++F+ + +         ID +G    L    A
Sbjct: 361 -VLFAIRHNYAAPPHPVRIDPDGTVTVLPTVDA 392



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/340 (14%), Positives = 102/340 (30%), Gaps = 72/340 (21%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R     +S D  + +T      + R  FV+           +  +D  G           
Sbjct: 19  RVAGLAVSPDGSRVVTTISELDDKRTAFVTA----------IWELDPAGRRPARRLTRGA 68

Query: 212 QILFEPRFSPNQQKVAYATYDDED--------ILRVYLMDTRIDRAPKRIGNFRS----- 258
           +    P F+P    +  A+    D           ++ +  +   A + +          
Sbjct: 69  KGERAPAFTPGGDLLFLASRPTGDSAEDGDSPPAALWRLPAQGGEAVEELTPPGGVTSVR 128

Query: 259 --------MILAP---------------RFSSNGKRALI--------SVQKD-EAMDIYS 286
                   ++ AP                   + K + +        S   D      + 
Sbjct: 129 CARAAGVAVVSAPMLVSAADLDDDKRLRALRKDNKVSAVLHSGYPVRSWDHDLGPDQPHL 188

Query: 287 VD-LQSNATERLTNTLFINISASYSPDSSQIV--FESDREG---KEQLYVMQSNGSDQKR 340
           +D                + +   S D S +V  +++   G   ++ L  ++    ++  
Sbjct: 189 LDAADGRDLTPRPGGGLRDAAVDVSDDGSFLVTSWQNPSAGAALRDTLVRVEVGSGERTT 248

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
           ++ D  A    P  SP G ++AFT+          +  +  +   G + R L    +   
Sbjct: 249 VADDPGADLGHPAISPDGRMLAFTRETISTPLQAPRITLCCLHF-GGEVRELTAHWDRWP 307

Query: 394 -APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            + TWS  G  LI +   +G     ++ ID +    T + 
Sbjct: 308 TSVTWSRDGAKLIVTADDNGRGP--IFLIDPDTGAVTKLT 345


>gi|304410925|ref|ZP_07392542.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           baltica OS183]
 gi|307304904|ref|ZP_07584654.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           baltica BA175]
 gi|304350822|gb|EFM15223.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           baltica OS183]
 gi|306912306|gb|EFN42730.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           baltica BA175]
          Length = 826

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 82/226 (36%), Gaps = 13/226 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++  +A    ++          T+  R  + I ++     A ++  +  +  + ++  + 
Sbjct: 337 DEDVLAKVKAENAKAKGETYQSTKAPRKIQLIQDWGWTQSAIQWHESEDKLALMLEATDN 396

Query: 282 MDIYS--VDLQSNA---TERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQS 333
            D +   VDL         RL +  ++N   +   + P +  + + S+  G  QLYV   
Sbjct: 397 KDRWIASVDLAKGKFTTEHRLHDDAWVNYDYNQFGWLPGTDSLYYLSEESGYSQLYVKGL 456

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSN 391
            G   + ++Q K     D   SP  + I +         + +  +     +   L +   
Sbjct: 457 -GEKPRALTQGKFV-VSDITLSPDANYIYYKANQTHPGIYNVHRVNLATGKNEQLTQWDG 514

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               + SP G  L+ +  +      +LY   + G  + L +  + A
Sbjct: 515 NLDYSLSPDGTQLLLNASRRTQPN-ELYVQPIGGELKQLTSYTSDA 559



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 62/173 (35%), Gaps = 13/173 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSR-------DQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
               +   D A  ++ T  R       +    +  + P    + Y + +        L  
Sbjct: 397 KDRWIASVDLAKGKFTTEHRLHDDAWVNYDYNQFGWLPGTDSLYYLSEESG---YSQLYV 453

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
             +   P+ +   + ++     S +         +      +++ V+L +   E+LT   
Sbjct: 454 KGLGEKPRALTQGKFVVSDITLSPDANYIYYKANQTHPGIYNVHRVNLATGKNEQLTQWD 513

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             N+  S SPD +Q++  + R  +     +Q  G + K+++     ++ +  W
Sbjct: 514 G-NLDYSLSPDGTQLLLNASRRTQPNELYVQPIGGELKQLTSYTSDAFKNYPW 565


>gi|118357041|ref|XP_001011771.1| hypothetical protein TTHERM_01154640 [Tetrahymena thermophila]
 gi|89293538|gb|EAR91526.1| hypothetical protein TTHERM_01154640 [Tetrahymena thermophila SB210]
          Length = 2421

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 89/241 (36%), Gaps = 17/241 (7%)

Query: 186  SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +G+  N L + + + G  +          +F   FS + + +A  +   +D         
Sbjct: 1674 AGLKDNFLYIWNVQQGFQLVNTIQGHSDFIFSVAFSSDGKYIATGS---KDKTCKIWDAE 1730

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-- 302
            +  +    I      IL+  FS +GK    +   D+   I+++ LQ              
Sbjct: 1731 KGLQLINTIQGHHQTILSVAFSDDGKYLA-TSSHDQTCKIFNI-LQGFEFINTIQGHAQT 1788

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            IN S ++SPD   +      +   +++ ++        I Q  +       +S     +A
Sbjct: 1789 IN-SVAFSPDGKYLA-TGSGDNTCRIWSVEKKKFYLLNILQGHKNQINSVAFSADSKYLA 1846

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                      I  +++ G Q    ++D  S++ + T+SP G+  +       D   K++S
Sbjct: 1847 TGSQDNT-CKIWNIER-GFQLINTIQDHFSSINSVTFSPDGKYFV---TGSSDKSCKIWS 1901

Query: 421  I 421
            +
Sbjct: 1902 V 1902



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 69/190 (36%), Gaps = 17/190 (8%)

Query: 238  RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            ++++   +  +  K I N +  +    FS +GK    +  KD  + I++V         +
Sbjct: 1637 QIHIYSLQNLQFIKTIQNCKIDLNISAFSPDGKYLATAGLKDNFLYIWNVQQGFQLVNTI 1696

Query: 298  TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWS 355
                    S ++S D   I   S    K++   +       + I+  Q    +     +S
Sbjct: 1697 QGHSDFIFSVAFSSDGKYIATGS----KDKTCKIWDAEKGLQLINTIQGHHQTILSVAFS 1752

Query: 356  PQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKD 411
              G  +A +      + F I      G +    ++     + +  +SP G+ L       
Sbjct: 1753 DDGKYLATSSHDQTCKIFNI----LQGFEFINTIQGHAQTINSVAFSPDGKYLA---TGS 1805

Query: 412  GDTGSKLYSI 421
            GD   +++S+
Sbjct: 1806 GDNTCRIWSV 1815



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/224 (20%), Positives = 86/224 (38%), Gaps = 26/224 (11%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ + +A  T   +D         +  +    I      I +  FSS+GK    +  
Sbjct: 1663 AFSPDGKYLA--TAGLKDNFLYIWNVQQGFQLVNTIQGHSDFIFSVAFSSDGKYIA-TGS 1719

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFIN----ISASYSPDSSQIVFESDREGKEQLYVMQS 333
            KD+   I+  D +     +L NT+  +    +S ++S D   +   S  +   +++ +  
Sbjct: 1720 KDKTCKIW--DAEKGL--QLINTIQGHHQTILSVAFSDDGKYLA-TSSHDQTCKIFNI-L 1773

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----ED 389
             G +     Q    +     +SP G  +A T        I  ++K   +  LL       
Sbjct: 1774 QGFEFINTIQGHAQTINSVAFSPDGKYLA-TGSGDNTCRIWSVEK--KKFYLLNILQGHK 1830

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            + + +  +S   + L    +   D   K+++I+   R   LINT
Sbjct: 1831 NQINSVAFSADSKYLATGSQ---DNTCKIWNIE---RGFQLINT 1868



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 83/240 (34%), Gaps = 25/240 (10%)

Query: 191  NSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            N+  +   D G +         + +    FS + + +A  + D     +++    R +  
Sbjct: 2110 NTCKIWRVDKGFDFLTTIQGHSKAINSVAFSADGKYLATGSSD--STCKIWNAHKRFELL 2167

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT----NTLFINI 305
                      I A  FS NGK   +            +D++    E +T    NT  IN 
Sbjct: 2168 QTIDAEIH-HITAVAFSLNGKYLAL----GSYFACKILDVE-KGFEVITKIQENTEKIN- 2220

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S  +S DS      S+ +   ++Y  ++       IS    +  +   +S  G  +A T 
Sbjct: 2221 SVVFSDDSKYFATGSN-DKTCKIYTAENYFQLVSTIS-GHTSFVYSVAFSADGRFLA-TG 2277

Query: 366  FSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +   I  M++    E L+        + +  +SP    L        D   K++ ++
Sbjct: 2278 SQDKTCKIWNMRQ--GFEHLITLQGHTFEINSVAFSPDSNFLATGSY---DKTCKIWCVN 2332



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 81/230 (35%), Gaps = 22/230 (9%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              SG     +  +++    +  +       +    FS + + +A  + D  +  +++ ++
Sbjct: 1803 TGSGDNTCRIWSVEKKKFYLLNILQGHKNQINSVAFSADSKYLATGSQD--NTCKIWNIE 1860

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
             R  +    I +  S I +  FS +GK   ++   D++  I+SV+ +      +      
Sbjct: 1861 -RGFQLINTIQDHFSSINSVTFSPDGKY-FVTGSSDKSCKIWSVE-KGFQLFNIIQGHSQ 1917

Query: 304  NI-SASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             I S ++S D   +   S                + +     + I+           +S 
Sbjct: 1918 EIKSVAFSGDGQLLATVSSDNTCKIWNSLYGFCFINNIQGHSQPITSVT--------FSV 1969

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
             G  +A T    +   I  +  +    + +    S + + ++S  G+ L 
Sbjct: 1970 DGKYLA-TASEDKTCKIWNLLNNCQILKTIQGHTSKINSVSFSADGKYLA 2018



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 46/125 (36%), Gaps = 5/125 (4%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                     ++   FS + + +A  + D     +++ M    +      G+   +  +  
Sbjct: 2253 STISGHTSFVYSVAFSADGRFLATGSQD--KTCKIWNMRQGFEHLITLQGHTFEIN-SVA 2309

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS +      +   D+   I+ V+      + +   ++I  S ++S D   +V    R+ 
Sbjct: 2310 FSPDSNFLA-TGSYDKTCKIWCVNYGFQLIKNIEAHIWIISSLAFSTDGKYLV-TGSRDK 2367

Query: 325  KEQLY 329
              +++
Sbjct: 2368 TCKIW 2372



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 84/240 (35%), Gaps = 27/240 (11%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                Q +    FS + + +A A+   ED            +  K I    S I +  FS+
Sbjct: 1956 QGHSQPITSVTFSVDGKYLATAS---EDKTCKIWNLLNNCQILKTIQGHTSKINSVSFSA 2012

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            +GK    +  +D+   I++   +    + +   +    SAS+SP+S  +      +   +
Sbjct: 2013 DGKYLA-TCSEDKTCKIWNTQNEFQMIKSIEGHVLEVNSASFSPNSKYLA-TGSSDKTCK 2070

Query: 328  LYVMQ-----SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            ++ ++     +N  +++ I            +S     +A          I  + K    
Sbjct: 2071 IWCIEKLYHLNNSIEEQSI------FVNQVTFSQDCKYLA-ACLDNNTCKIWRVDK--GF 2121

Query: 383  ERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            + L     +   + +  +S  G+ L        D+  K++  + + R E L    A    
Sbjct: 2122 DFLTTIQGHSKAINSVAFSADGKYLA---TGSSDSTCKIW--NAHKRFELLQTIDAEIHH 2176


>gi|328769416|gb|EGF79460.1| hypothetical protein BATDEDRAFT_19959 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 385

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 89/229 (38%), Gaps = 19/229 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++Y      + +   +FSP+ + +A ++ D      + L      R  + +   R  +
Sbjct: 77  YVLKYTLLGHTKSISSVKFSPDGKWLASSSADK----TIRLWHAIDGRHERTLLGHREGV 132

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+ +    S   D+ + I+  D  S+A + L          +Y+P S+ IV  S
Sbjct: 133 SDVAWSSDSQYIC-SASDDKTIRIWKYD-SSDAVKILKGHTNYVFCVNYNPQSNLIVSGS 190

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         ++            ++  G LI  +   G    I +     
Sbjct: 191 F---DESVRIWDVRKGKCIKLLPAHSDPVTAVCFNRDGTLIVSSSLDG---LIRIWDTAT 244

Query: 381 SQ-ERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            Q  + L++D N  +    +SP+G+ ++ S     D+  +L+S   NG+
Sbjct: 245 GQCLKTLIDDDNPPVSFVKFSPNGKYILASTY---DSTLRLWSYS-NGK 289


>gi|226501998|ref|NP_001143652.1| hypothetical protein LOC100276374 [Zea mays]
 gi|195623920|gb|ACG33790.1| hypothetical protein [Zea mays]
          Length = 319

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 76/211 (36%), Gaps = 16/211 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +R       + +   +FSP+ + +A A+ D   +LRV+            +      
Sbjct: 14  GYVLRSTLEGHRRAVSTVKFSPDGRLLASASAD--KLLRVWSSSDLT--PVAELEGHGEG 69

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIV 317
           +    FS +G+    S   D  + I+ + +   A   + LT         S+SP  + + 
Sbjct: 70  VSDLSFSPDGRLLA-SASDDRTVRIWDLAVGGGARLVKTLTGHTNYAFCVSFSPHGNVLA 128

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S     E + V +       R+            +  +GD+I    + G      V  
Sbjct: 129 SGSF---DETVRVWEVRSGKCLRVLPAHSEPVTAVDFDREGDMIVSGSYDG---LCRVWD 182

Query: 378 KDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
                  + L++D +  +    +SP+G+ ++
Sbjct: 183 SATGHCVKTLIDDESPPVSFAKFSPNGKFIL 213


>gi|108800526|ref|YP_640723.1| peptidase S9, prolyl oligopeptidase active site region
           [Mycobacterium sp. MCS]
 gi|119869665|ref|YP_939617.1| peptidase S9 prolyl oligopeptidase [Mycobacterium sp. KMS]
 gi|108770945|gb|ABG09667.1| peptidase S9, prolyl oligopeptidase active site region
           [Mycobacterium sp. MCS]
 gi|119695754|gb|ABL92827.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Mycobacterium sp. KMS]
          Length = 666

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/237 (12%), Positives = 70/237 (29%), Gaps = 23/237 (9%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L D  D + +  +         R  A  +SDD    +T  +       L           
Sbjct: 188 LLDAADGRDLTPR----PGGGLRDAAVDVSDDGSFLVTSWQNPSAGAAL----------- 232

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT----R 245
           +++L  ++        +       L  P  SP+ + +A+        L+   +       
Sbjct: 233 RDTLVRVEVGSGERTTVADDPGADLGHPAISPDGRMLAFTRETISTPLQAPRITLCCLHF 292

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +   ++     +  +S +G + +++   +    I+ +D  + A  +LT+      
Sbjct: 293 GGEVRELTAHWDRWPTSVTWSRDGAKLIVTADDNGRGPIFLIDPDTGAVTKLTDDDHTYT 352

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD----PVWSPQG 358
               +P         +         +  +G+     + D              +P G
Sbjct: 353 DVVTAPGGVLFAIRHNYAAPPHPVRIDPDGTVTVLPTVDAPRLPGTLSEITATAPDG 409



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 69/213 (32%), Gaps = 14/213 (6%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-----MDIYSVDL 289
              + +L+D    R             A   S +G   + S Q   A       +  V++
Sbjct: 182 GPDQPHLLDAADGRDLTPRPGGGLRDAAVDVSDDGSFLVTSWQNPSAGAALRDTLVRVEV 241

Query: 290 QSNATERLTNTLFINIS-ASYSPDSSQIVFE----SDREGKEQLYVMQSN-GSDQKRISQ 343
            S     + +    ++   + SPD   + F     S      ++ +   + G + + ++ 
Sbjct: 242 GSGERTTVADDPGADLGHPAISPDGRMLAFTRETISTPLQAPRITLCCLHFGGEVRELTA 301

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPSGR 402
             +       WS  G  +  T     +  I ++  D      L +D +       +P G 
Sbjct: 302 HWDRWPTSVTWSRDGAKLIVTADDNGRGPIFLIDPDTGAVTKLTDDDHTYTDVVTAPGG- 360

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            ++F+ + +         ID +G    L    A
Sbjct: 361 -VLFAIRHNYAAPPHPVRIDPDGTVTVLPTVDA 392



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/340 (14%), Positives = 102/340 (30%), Gaps = 72/340 (21%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R     +S D  + +T      + R  FV+           +  +D  G           
Sbjct: 19  RVAGLAVSPDGSRVVTTISELDDKRTAFVTA----------IWELDPAGRRPARRLTRGA 68

Query: 212 QILFEPRFSPNQQKVAYATYDDED--------ILRVYLMDTRIDRAPKRIGNFRS----- 258
           +    P F+P    +  A+    D           ++ +  +   A + +          
Sbjct: 69  KGERAPAFTPGGDLLFLASRPTGDSAEDGDSPPAALWRLPAQGGEAVEELTPPGGVTSVR 128

Query: 259 --------MILAP---------------RFSSNGKRALI--------SVQKD-EAMDIYS 286
                   ++ AP                   + K + +        S   D      + 
Sbjct: 129 CARAAGVAVVSAPMLVSAADLDDDKRLRALRKDNKVSAVLHSGYPVRSWDHDLGPDQPHL 188

Query: 287 VD-LQSNATERLTNTLFINISASYSPDSSQIV--FESDREG---KEQLYVMQSNGSDQKR 340
           +D                + +   S D S +V  +++   G   ++ L  ++    ++  
Sbjct: 189 LDAADGRDLTPRPGGGLRDAAVDVSDDGSFLVTSWQNPSAGAALRDTLVRVEVGSGERTT 248

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
           ++ D  A    P  SP G ++AFT+          +  +  +   G + R L    +   
Sbjct: 249 VADDPGADLGHPAISPDGRMLAFTRETISTPLQAPRITLCCLHF-GGEVRELTAHWDRWP 307

Query: 394 -APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            + TWS  G  LI +   +G     ++ ID +    T + 
Sbjct: 308 TSVTWSRDGAKLIVTADDNGRGP--IFLIDPDTGAVTKLT 345


>gi|295705034|ref|YP_003598109.1| hypothetical protein BMD_2918 [Bacillus megaterium DSM 319]
 gi|294802693|gb|ADF39759.1| hypothetical protein BMD_2918 [Bacillus megaterium DSM 319]
          Length = 122

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 54/114 (47%), Gaps = 4/114 (3%)

Query: 266 SSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FESDR 322
           S NGK+  +  QKD +   +   DL+ +   +L  +  I    S+SPD S++   F S++
Sbjct: 7   SPNGKQLALVQQKDAQTRTLSIADLKGSEAFQLALSTQI-FGVSWSPDGSKLAYNFISEK 65

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           EG + +++      D   ++ + + +     WS  G+ +  + F+  +    V+
Sbjct: 66  EGDKGIFIADGLTGDVTHLNVNLDYAADQLDWSQSGNKLVASSFTQNQVHTYVI 119



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 44/115 (38%), Gaps = 5/115 (4%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--ISVQ 277
           SPN +++A     D     + + D +   A +   +  + I    +S +G +       +
Sbjct: 7   SPNGKQLALVQQKDAQTRTLSIADLKGSEAFQLALS--TQIFGVSWSPDGSKLAYNFISE 64

Query: 278 KDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           K+    I+  D  +     L  N  +      +S   +++V  S  + +   YV+
Sbjct: 65  KEGDKGIFIADGLTGDVTHLNVNLDYAADQLDWSQSGNKLVASSFTQNQVHTYVI 119



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%)

Query: 355 SPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSRKKD 411
           SP G  +A  +    +   + +    GS+   L   + +   +WSP G  L   F  +K+
Sbjct: 7   SPNGKQLALVQQKDAQTRTLSIADLKGSEAFQLALSTQIFGVSWSPDGSKLAYNFISEKE 66

Query: 412 GDTGSKL 418
           GD G  +
Sbjct: 67  GDKGIFI 73



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 7/109 (6%)

Query: 310 SPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTKF 366
           SP+  Q+     ++ + + L +    GS+  +++   +   F   WSP G  +A  F   
Sbjct: 7   SPNGKQLALVQQKDAQTRTLSIADLKGSEAFQLALSTQ--IFGVSWSPDGSKLAYNFISE 64

Query: 367 SGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                 I +          L    D       WS SG  L+ S      
Sbjct: 65  KEGDKGIFIADGLTGDVTHLNVNLDYAADQLDWSQSGNKLVASSFTQNQ 113


>gi|270295664|ref|ZP_06201865.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274911|gb|EFA20772.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 478

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 85/269 (31%), Gaps = 58/269 (21%)

Query: 188 IIKNSLCVMDRDGANIR--YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             KN   +M  DG        T S       P + P+ + +AY+  +             
Sbjct: 181 RGKNGGTLMQIDGKREMLDTKTDSTLSAGVYPYWHPSGKFIAYSVNNTRQSFHA------ 234

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           +      + +  S +L   +       L+S             L                
Sbjct: 235 VKDERVEVLDLESDVLI--YHPETHELLLS------------PLLQKKEV-------FET 273

Query: 306 SASYSPDSSQIVFES---------DREGKEQLYVMQS---NGSDQKRISQDKEA-----S 348
              +SPD  ++ F +          +E +  L  +     +G+  + I     A     S
Sbjct: 274 FPVFSPDGRKLYFCAAEAKPIPAEYKEIRYSLCSIDFNPEDGTFGETIDTLVNAAAMKKS 333

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAPT---WS 398
              P  S  G+ I FT      F+I        ++       R + E ++    +   WS
Sbjct: 334 ISFPRPSYDGEYIMFTLSDYGNFSIWHKEADLWLLDLKDGGMRPIKEVNSDDTESFHNWS 393

Query: 399 PSGRSLIFSRKKDGDTGSKLY--SIDLNG 425
            + R  +FS ++     ++LY  S+D NG
Sbjct: 394 SNSRWFVFSSRRGDGLYTRLYLASMDENG 422



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 61/177 (34%), Gaps = 31/177 (17%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGN 255
           L   ++     P FSP+ +K+ +   + + I   Y            +       + I  
Sbjct: 264 LLQKKEVFETFPVFSPDGRKLYFCAAEAKPIPAEYKEIRYSLCSIDFNPEDGTFGETIDT 323

Query: 256 F------RSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLF 302
                  +  I  PR S +G+  + ++             D++ +DL+      +     
Sbjct: 324 LVNAAAMKKSISFPRPSYDGEYIMFTLSDYGNFSIWHKEADLWLLDLKDGGMRPIKEVNS 383

Query: 303 INIS--ASYSPDSSQIVFESDREGK--EQLYV--MQSNG--SDQKRISQDKEASYFD 351
            +     ++S +S   VF S R      +LY+  M  NG       + Q+    Y+D
Sbjct: 384 DDTESFHNWSSNSRWFVFSSRRGDGLYTRLYLASMDENGVVGKPFLLPQENPWEYYD 440


>gi|229009670|ref|ZP_04166894.1| Acylamino-acid-releasing enzyme [Bacillus mycoides DSM 2048]
 gi|228751550|gb|EEM01352.1| Acylamino-acid-releasing enzyme [Bacillus mycoides DSM 2048]
          Length = 655

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 110/309 (35%), Gaps = 54/309 (17%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D I+   + +  D    I ++S        KN + V   DG +   +T  ++ +    ++
Sbjct: 69  DSIHPLWSPDSRD----IAYLSPVGDGDNKKNQIFVKSIDGYSELQITDEKEGVSTF-KW 123

Query: 220 SPNQQKVAYATYDD-----EDILRVY--------------------LMDTRIDRAPKRIG 254
            P  +   Y          +    +Y                        + D+  + I 
Sbjct: 124 EPTGKGFYYVAQSKECEEIKKRKELYGDFQHAGKEHRNNCLYYIEIEKGIQNDKEEREIS 183

Query: 255 NFRSMILAPRF-------SSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +     F       S++G + +     S+      D+Y +D+++   +++     +
Sbjct: 184 GVYQLTDGKDFYIHNFDISNDGTKVVFMATPSLNDHMNGDLYILDVEAEELQKMNVDKLL 243

Query: 304 NISASYSPDSSQIVFE-SDREGKE--------QLYVMQSNGSDQKRISQDKEASYFDPVW 354
             S  +SP+ S+I +  S RE            L +   N  +  +   + +++     W
Sbjct: 244 GGSVCFSPEGSKICYSASIREKDYYRNHIQESTLEIYDMNTGEVIQPLTNFDSTVMPLQW 303

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD 413
           + +G  I         + IG++ +DG+ E L  + D  +   + +  G  + +S+    +
Sbjct: 304 TDKG--ILIRWQDKTNYRIGLLCEDGTVEMLGDKVDGFIMDASITRDGNHISYSKAITNE 361

Query: 414 TGSKLYSID 422
           T  ++Y  D
Sbjct: 362 T-FEIYLDD 369



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 43/116 (37%), Gaps = 12/116 (10%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            A+ S D   + F        D   +  +++ + +      ++   +     P+WSP   
Sbjct: 22  GANISDDGKGVAFVKKTANWKDNTYRNHIWIYEKDKEQSYLLTT-GDIDSIHPLWSPDSR 80

Query: 360 LIAFTKFSGEKFA----IGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G+       I V   DG S+ ++  E   +    W P+G+   +  + 
Sbjct: 81  DIAYLSPVGDGDNKKNQIFVKSIDGYSELQITDEKEGVSTFKWEPTGKGFYYVAQS 136



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 9/94 (9%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPS 400
           +      S  G  +AF K +        +  I + +KD  Q  LL   D +   P WSP 
Sbjct: 19  TLSGANISDDGKGVAFVKKTANWKDNTYRNHIWIYEKDKEQSYLLTTGDIDSIHPLWSPD 78

Query: 401 GRSLIFSR--KKDGDTGSKLYSIDLNGRNETLIN 432
            R + +        +  ++++   ++G +E  I 
Sbjct: 79  SRDIAYLSPVGDGDNKKNQIFVKSIDGYSELQIT 112



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 90/272 (33%), Gaps = 56/272 (20%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDD 233
           + FV ++        +N + + ++D     YL  + D     P +SP+ + +AY +   D
Sbjct: 32  VAFVKKTANWKDNTYRNHIWIYEKD-KEQSYLLTTGDIDSIHPLWSPDSRDIAYLSPVGD 90

Query: 234 EDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQ--------------- 277
            D  +  +    ID   + +I + +  +   ++   GK      Q               
Sbjct: 91  GDNKKNQIFVKSIDGYSELQITDEKEGVSTFKWEPTGKGFYYVAQSKECEEIKKRKELYG 150

Query: 278 -------KDEAMDIYSVDLQSN-----------ATERLTNTLFINISAS-YSPDSSQIVF 318
                  +     +Y ++++                +LT+     I     S D +++VF
Sbjct: 151 DFQHAGKEHRNNCLYYIEIEKGIQNDKEEREISGVYQLTDGKDFYIHNFDISNDGTKVVF 210

Query: 319 ESDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---------- 364
            +     +     LY++     + ++++ DK        +SP+G  I ++          
Sbjct: 211 MATPSLNDHMNGDLYILDVEAEELQKMNVDKLLG-GSVCFSPEGSKICYSASIREKDYYR 269

Query: 365 -KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                    I  M   G   + L    +   P
Sbjct: 270 NHIQESTLEIYDMNT-GEVIQPLTNFDSTVMP 300



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 60/210 (28%), Gaps = 48/210 (22%)

Query: 261 LAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                S +GK                   I+  +     +  LT     +I   +SPDS 
Sbjct: 21  SGANISDDGKGVAFVKKTANWKDNTYRNHIWIYEKDKEQSYLLTTGDIDSIHPLWSPDSR 80

Query: 315 QIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            I + S        K Q++V   +G  + +I+ +KE       W P G    +   S E 
Sbjct: 81  DIAYLSPVGDGDNKKNQIFVKSIDGYSELQITDEKEG-VSTFKWEPTGKGFYYVAQSKEC 139

Query: 371 FAI-----------------------------GVMK----KDGSQERLLVEDSNL--QAP 395
             I                             G+      ++ S    L +  +      
Sbjct: 140 EEIKKRKELYGDFQHAGKEHRNNCLYYIEIEKGIQNDKEEREISGVYQLTDGKDFYIHNF 199

Query: 396 TWSPSGRSLIFSRKK--DGDTGSKLYSIDL 423
             S  G  ++F      +      LY +D+
Sbjct: 200 DISNDGTKVVFMATPSLNDHMNGDLYILDV 229


>gi|119487600|ref|ZP_01621210.1| hypothetical protein L8106_27127 [Lyngbya sp. PCC 8106]
 gi|119455769|gb|EAW36905.1| hypothetical protein L8106_27127 [Lyngbya sp. PCC 8106]
          Length = 667

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 77/210 (36%), Gaps = 15/210 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y        +    FSP ++ +A  + D      + + D +  +    +    + + +  
Sbjct: 375 YTLKGHRNAVTSITFSPTEEMIASGSQDQ----TIEIWDLKKGKRWYTLTGHSNWVTSIA 430

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDRE 323
            S +G+    S  +D  ++I+ +  +      L+ +   + + A +SP    +   S R+
Sbjct: 431 ISPDGQTLA-SGSRDHTIEIWDL-KKGKRWYTLSGHHDGVEVVA-FSPQGDVLASGS-RD 486

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +++        +       +   +   +SP G L+           +  M+  G + 
Sbjct: 487 HTIEIW--DLKKGKRGYTLLGHQDRVYGLAFSPDGRLLVSGSKDNTV-RLWDMQ-QGKEL 542

Query: 384 RLLVEDSNL-QAPTWSPSGRSLIFSRKKDG 412
             L + S+  +   + P G+ L  S  +DG
Sbjct: 543 ESLQDHSDWVRTVAFRPDGQQLA-SGSRDG 571



 Score = 46.2 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 80/217 (36%), Gaps = 33/217 (15%)

Query: 107 GAQVLV---TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
           G +V+     G V+  G     +E  +WD+K  K+            +  + H   D +Y
Sbjct: 467 GVEVVAFSPQGDVLASGSRDHTIE--IWDLKKGKR-----------GYTLLGHQ--DRVY 511

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                  G    R+L      VSG   N++ + D                +    F P+ 
Sbjct: 512 GLAFSPDG----RLL------VSGSKDNTVRLWDMQQGKELESLQDHSDWVRTVAFRPDG 561

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           Q++A  + D   +++++          + +   +S + +  +S +G+    S  +   +D
Sbjct: 562 QQLASGSRD--GMIKLWQPQGTRWIVQRTLRADQSDVFSIAYSRDGQLLA-SGNQHG-ID 617

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           ++ V+      E LT+     +S  +  D+  +   S
Sbjct: 618 LWDVN-SGTLLETLTDHSADVLSVMFRQDNLMLASGS 653


>gi|108760348|ref|YP_631217.1| adventurous gliding motility protein AglU [Myxococcus xanthus DK
           1622]
 gi|27804886|gb|AAO22920.1| adventurous gliding motility protein U [Myxococcus xanthus]
 gi|108464228|gb|ABF89413.1| adventurous gliding motility protein AglU [Myxococcus xanthus DK
           1622]
          Length = 547

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 73/216 (33%), Gaps = 30/216 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---S 275
           F+P+ + + +            +   + D  P ++G+          S +G+R      S
Sbjct: 213 FTPDGKTLLFKRRLSAAGGMAAISVEKPDAPPMKVGDQVGDY---EVSPDGQRVAFQVRS 269

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----LYVM 331
                  D+Y  +L     +RL     +    ++SPD   +       GK      LY+ 
Sbjct: 270 ESVRGLYDLYLAELPELKAKRLAVASGV---FAFSPDGKWLA--RTENGKPNVPGDLYLG 324

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK----KDGSQERLLV 387
            + G   +++            +SP    + F +        G+M      DG+ +++  
Sbjct: 325 PAAGGAGRKL----GVQVEKLAFSPDSQAVGFLEKYDSTANAGLMSVAALPDGTTKQV-- 378

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               +    W   GR + F  +         YS+DL
Sbjct: 379 -GGRVPNFVWGSDGRYVAFLSRILKPA----YSVDL 409



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 99/328 (30%), Gaps = 60/328 (18%)

Query: 171 GDFNSRILFVSESVVSGIIKN----SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           G F + ++   +  + GI        L  +  +G   R L      +      +P  + V
Sbjct: 78  GRFATYLVNGQKPRLDGIPPQMVLGELYAVPVEGGEPRKLGEGVTNVPGGQLVAPGSKYV 137

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            + T  +       L    +D A        + +     S +G +          + + +
Sbjct: 138 LFLTGYNPATQSGALNVASLDDAKAAPVVLGTAVSYMLPSPDGTKLAYV--DGGKLKLGT 195

Query: 287 VD-----------------LQSNAT---ERLTNTLF--------INISA----------S 308
           +                            RL+             +              
Sbjct: 196 LPSGPFTDVAAEVSTAQFTPDGKTLLFKRRLSAAGGMAAISVEKPDAPPMKVGDQVGDYE 255

Query: 309 YSPDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            SPD  ++ F+   E   G   LY+ +      KR++     +     +SP G  +A T+
Sbjct: 256 VSPDGQRVAFQVRSESVRGLYDLYLAELPELKAKRLA----VASGVFAFSPDGKWLARTE 311

Query: 366 FSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                    + +    G   R L     ++   +SP  +++ F  K D    + L S+  
Sbjct: 312 NGKPNVPGDLYLGPAAGGAGRKL--GVQVEKLAFSPDSQAVGFLEKYDSTANAGLMSVAA 369

Query: 424 --NGRNET---LINTPAYASDPQWVGFM 446
             +G  +     +    + SD ++V F+
Sbjct: 370 LPDGTTKQVGGRVPNFVWGSDGRYVAFL 397



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 27/219 (12%), Positives = 70/219 (31%), Gaps = 18/219 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A       ++     +      A +++G     +    FS + +      +
Sbjct: 299 AFSPDGKWLARTENGKPNVPGDLYLGPAAGGAGRKLGVQVEKL---AFSPDSQAVGFLEK 355

Query: 278 KDEAMDIYSVDLQ---SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV-MQS 333
            D   +   + +       T+++        +  +  D   + F S R  K    V +  
Sbjct: 356 YDSTANAGLMSVAALPDGTTKQV---GGRVPNFVWGSDGRYVAFLS-RILKPAYSVDLML 411

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---FSGEKFAIGVMKKDGSQERLLVEDS 390
               ++R ++ ++   F   ++P    + F      +G       M      +       
Sbjct: 412 YTLGEERAAKVQQG-VFGYGFTPGNGQVVFRSNCIRNGRSCDFMAMDLPRQADPRTWLQG 470

Query: 391 NLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRN 427
            + +   S  G+ ++  ++R         +Y +    R 
Sbjct: 471 -IFSYKLSDDGQRVLVTYARMDSDTYDVAVYDVKTQARK 508


>gi|186681055|ref|YP_001864251.1| hypothetical protein Npun_F0545 [Nostoc punctiforme PCC 73102]
 gi|186463507|gb|ACC79308.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 782

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 72/212 (33%), Gaps = 21/212 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +      + +     SP+ + +   + D      + + + +  +  + +      I +  
Sbjct: 494 HTLTGHSEKVTSVAISPDSETLVSGSADK----TIKVWNLKTGKLIRTLTEDLGKISSVA 549

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDR 322
            S +G    + + +    ++   +L S+      L +   +N  A  SPD   +      
Sbjct: 550 ISPDGHYFAVGICQHPRSNVKVWNLNSDKLLHTLLGHQKPVNCIA-ISPDGQFLA----- 603

Query: 323 EGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DG 380
            G  ++ +   +  D  RIS      +      SP G ++A          I +     G
Sbjct: 604 SGSNKIKIWNLHKGD--RISTLWHSFTVNAAAISPDGTILASGSSDN---KIRLWNPHTG 658

Query: 381 SQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
              R L      +++   SP G  ++FS   D
Sbjct: 659 DPLRTLNGHSGEIKSVIISPDGE-ILFSASAD 689



 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 64/192 (33%), Gaps = 13/192 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG  K  +  +       R  T      +     SP+   +A  + D++    + L +  
Sbjct: 604 SGSNKIKIWNLH---KGDRISTLWHSFTVNAAAISPDGTILASGSSDNK----IRLWNPH 656

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + +      I +   S +G   L S   D+ + I+ +         LT  L    
Sbjct: 657 TGDPLRTLNGHSGEIKSVIISPDG-EILFSASADKTIKIWHL-TTGKVLHTLTGHLEEVR 714

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S + SPD  +I+F    +  + + +      +  +   +   +      S  G  +A + 
Sbjct: 715 SLAVSPDG-EILFSGSTD--KTIKIWHLQTGELLQTITEHSGTVNSIAISHDGQFLA-SA 770

Query: 366 FSGEKFAIGVMK 377
            S +   I  + 
Sbjct: 771 SSDKTIKIWQIN 782



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 77/233 (33%), Gaps = 16/233 (6%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           ++++ V + +   + +      + +     SP+ Q +A          ++ + +      
Sbjct: 566 RSNVKVWNLNSDKLLHTLLGHQKPVNCIAISPDGQFLA------SGSNKIKIWNLHKGDR 619

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              + +  ++  A   S +G     S   D  + +++     +    L        S   
Sbjct: 620 ISTLWHSFTVN-AAAISPDGTILA-SGSSDNKIRLWN-PHTGDPLRTLNGHSGEIKSVII 676

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +I+F +  +  + + +                        SP G+ I F+  + +
Sbjct: 677 SPDG-EILFSASAD--KTIKIWHLTTGKVLHTLTGHLEEVRSLAVSPDGE-ILFSGSTDK 732

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              I  ++     + +      + +   S  G+ L  +     D   K++ I+
Sbjct: 733 TIKIWHLQTGELLQTITEHSGTVNSIAISHDGQFLASASS---DKTIKIWQIN 782


>gi|238897200|ref|YP_002921948.1| hypothetical protein KP1_5470 [Klebsiella pneumoniae NTUH-K2044]
 gi|238549530|dbj|BAH65881.1| hypothetical protein KP1_5470 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 408

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 57/162 (35%), Gaps = 23/162 (14%)

Query: 280 EAMDIYSVDLQSNATERLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQLY 329
                        +  RLT T        +N+   +   +P ++ I F   D  G  QL+
Sbjct: 255 GTATTMPAPPAGVSQRRLTFTHHRRYPGLVNVPRHWVRANPQATAIAFLMRDDAGVVQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++   G + ++++           W P G+ + F         I            L + 
Sbjct: 315 LISPQGGEPRQLTHHASGIQSAFNWHPSGEWLGFALED----RIACCHAGTGDITFLTDT 370

Query: 390 SNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +  AP+     +SP G+ + +  + DG    +L+ +   GR
Sbjct: 371 -HAHAPSADAIVFSPDGKQIAWMEEVDGYR--QLW-VTQTGR 408



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  +++++L+  +     +   +   +  A  +  +G+    +++   
Sbjct: 295 PQATAIAFLMRDDAGVVQLWLISPQGGEPRQLTHHASGIQSAFNWHPSGEWLGFALE--- 351

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I      +     LT+T     SA    +SPD  QI +  + +G  QL+V 
Sbjct: 352 -DRIACCHAGTGDITFLTDTHAHAPSADAIVFSPDGKQIAWMEEVDGYRQLWVT 404


>gi|149176498|ref|ZP_01855111.1| probable vegetatible incompatibility protein HET-E-1 [Planctomyces
           maris DSM 8797]
 gi|148844611|gb|EDL58961.1| probable vegetatible incompatibility protein HET-E-1 [Planctomyces
           maris DSM 8797]
          Length = 1722

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 62/170 (36%), Gaps = 16/170 (9%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
               T S   ++    +SP+ + +A A + +     V L     D+   R+      I +
Sbjct: 143 EHPPTYSSPPVITSLAYSPDGKILAVAGFHE-----VILHAADGDQILARLIGKSQRIES 197

Query: 263 PRFSSNGKRALISV---QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVF 318
            +FS +GK   ++     +   + I+  DL +   ++ +  T      AS+SPD   + F
Sbjct: 198 VQFSPDGKSLAVTGGTPAERGEVQIW--DLATKTLKKSIPVTYDTLYGASWSPDGKLLAF 255

Query: 319 -ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             SD      + V++     +            D V+S  G  +      
Sbjct: 256 GCSD----NTVRVIEVETGKEVLYQNAHYDWVLDTVFSTDGSHLISVSRD 301



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 67/222 (30%), Gaps = 20/222 (9%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG  I      + Q +   +FSP+ + +A       +   V + D       K I    
Sbjct: 179 ADGDQILARLIGKSQRIESVQFSPDGKSLAVTGGTPAERGEVQIWDLATKTLKKSIPVTY 238

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQ 315
             +    +S +GK        +    +  +++++     L      +      +S D S 
Sbjct: 239 DTLYGASWSPDGKLLAFGCSDN---TVRVIEVETGKEV-LYQNAHYDWVLDTVFSTDGSH 294

Query: 316 IVFES-DREG-----KEQLYVMQSNGSDQKRISQDKEASYFDP------VWSPQGDLIAF 363
           ++  S DR       K Q ++        K ++    A    P      V    G    +
Sbjct: 295 LISVSRDRTTKLTELKTQRFIDNITSITPKALTGGLAAIDRHPTQDTVLVGGADGVPKLY 354

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             F   K  IG         +       +      P G+ L+
Sbjct: 355 HVFRQSKRVIG--DDANLVRQFPALKGRIFGVDIHPDGKQLV 394



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/238 (14%), Positives = 76/238 (31%), Gaps = 30/238 (12%)

Query: 160 DDIYQSITG-----EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           D I   + G     E   F+     ++ +  +   +  + + D     ++   P     L
Sbjct: 182 DQILARLIGKSQRIESVQFSPDGKSLAVTGGTPAERGEVQIWDLATKTLKKSIPVTYDTL 241

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +   +SP+ + +A+   D+     V +++    +           +L   FS++G    I
Sbjct: 242 YGASWSPDGKLLAFGCSDN----TVRVIEVETGKEVLYQNAHYDWVLDTVFSTDGSHL-I 296

Query: 275 SVQKDEAMDI-------YSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKE 326
           SV +D    +       +  ++ S   + LT     I+   +        V     +G  
Sbjct: 297 SVSRDRTTKLTELKTQRFIDNITSITPKALTGGLAAIDRHPT-----QDTVLVGGADGVP 351

Query: 327 QLYVMQS-------NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +LY +         + ++  R     +   F     P G  +           + V  
Sbjct: 352 KLYHVFRQSKRVIGDDANLVRQFPALKGRIFGVDIHPDGKQLVAVSSLNHTGELKVFD 409



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 52/121 (42%), Gaps = 19/121 (15%)

Query: 340 RISQDKEASYFDP------VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSN 391
           R +Q+   +Y  P       +SP G ++A   F      + +   DG Q   RL+ +   
Sbjct: 139 RFNQEHPPTYSSPPVITSLAYSPDGKILAVAGF----HEVILHAADGDQILARLIGKSQR 194

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINT------PAYASDPQWVG 444
           +++  +SP G+SL  +     + G  +++ +      +++  T       +++ D + + 
Sbjct: 195 IESVQFSPDGKSLAVTGGTPAERGEVQIWDLATKTLKKSIPVTYDTLYGASWSPDGKLLA 254

Query: 445 F 445
           F
Sbjct: 255 F 255


>gi|17233206|ref|NP_490296.1| WD repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17135728|dbj|BAB78274.1| WD-repeat protein [Nostoc sp. PCC 7120]
          Length = 1191

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 57/315 (18%), Positives = 105/315 (33%), Gaps = 66/315 (20%)

Query: 165  SITGEKGDFNSRILFVSESVVS-----GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
             I G K D  +RI+  + S              + +   DG+ +R +  +  + +   + 
Sbjct: 838  KIAGAKSDAQNRIMDATLSPDGQIIAATKFNGEMTLYKADGSELRTIQTNLPESMI--KV 895

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+  ++   +   + I         I        +++  I    FS +GK   I+  + 
Sbjct: 896  SPDGSRLVLLSIRQQKIQFRLANGDLIQEMDA--AHYKPGI---EFSPDGKELAIAGNEP 950

Query: 280  EAMDIYSV---------DLQS-----NATERLTNTLFINISAS----------------- 308
            + + ++S          D  S     N    +T T   N   +                 
Sbjct: 951  DKIQLWSSEGKFLKTIKDADSLYFSPNNQTYITVTSANNPIPTLRLWRRDGKLLKTLSGQ 1010

Query: 309  --------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                    +SP    +V   DR GK  L V  + G+  +  + +  A+  D      G  
Sbjct: 1011 PHEITAMGFSPSGQFMV--GDRFGK--LVVWSAEGNLIQ--TLNHGAAIIDIALRNDGQQ 1064

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +A     G    I + + DG+  R L E + +    +SP G+ LI          S ++ 
Sbjct: 1065 LATV---GINQNIKLWRSDGTFIRTL-ETNQIGRFEFSPDGQLLI-----AKTIDSTIHI 1115

Query: 421  IDLNGRNETLINTPA 435
               +G   T I    
Sbjct: 1116 WQADGTPITRIPMGG 1130



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 72/177 (40%), Gaps = 19/177 (10%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +L +  RDG  ++ L+    +I     FSP+ Q   +   D    L V+      +    
Sbjct: 993  TLRLWRRDGKLLKTLSGQPHEITAM-GFSPSGQ---FMVGDRFGKLVVW----SAEGNLI 1044

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYS 310
            +  N  + I+     ++G++   +V  ++ + ++  D        L TN +       +S
Sbjct: 1045 QTLNHGAAIIDIALRNDGQQLA-TVGINQNIKLWRSD--GTFIRTLETNQIG---RFEFS 1098

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            PD   ++    +     +++ Q++G+   RI      + F   ++P G+ +  +  S
Sbjct: 1099 PDGQLLI---AKTIDSTIHIWQADGTPITRIPMGGAFNTFLN-FTPDGNRLISSSGS 1151



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 12/134 (8%)

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G     L V   +G  I+ L      I    R   + Q++A    +    L         
Sbjct: 1028 GDRFGKLVVWSAEGNLIQTLNHGAAIIDIALR--NDGQQLATVGINQNIKLWRSDGTFIR 1085

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                 +IG F        FS +G + LI+   D  + I+  D       R+      N  
Sbjct: 1086 TLETNQIGRFE-------FSPDG-QLLIAKTIDSTIHIWQAD--GTPITRIPMGGAFNTF 1135

Query: 307  ASYSPDSSQIVFES 320
             +++PD ++++  S
Sbjct: 1136 LNFTPDGNRLISSS 1149


>gi|149925094|ref|ZP_01913406.1| WD40-repeat containing protein [Plesiocystis pacifica SIR-1]
 gi|149814042|gb|EDM73674.1| WD40-repeat containing protein [Plesiocystis pacifica SIR-1]
          Length = 849

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 80/222 (36%), Gaps = 26/222 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +       +    + P+ + +A A +D   +L     D R    P  + +   +  A  
Sbjct: 1   SVLQGHGDRVVALEWHPSGRWLASAGFDGRALLWALDEDGRSLAPPLELPHADKVYTA-V 59

Query: 265 FSSNGKRALISVQKDEAMDIYSVD--LQSNATERLTNTLFIN--------ISASYSPDSS 314
           FS +G+  L +  +D ++ ++ V   + S A +       I          +A +SPD  
Sbjct: 60  FSPDGRWVL-TASRDHSVRLWPVPDAVPSGAEDEPAALRSIELRGNEDLVWTAVFSPDGR 118

Query: 315 QIVFESDREGKEQLYVMQSNGS--------DQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++   + R+GK +++ +  +          +    +       ++  +SP G  +     
Sbjct: 119 RVA-SAGRDGKARVWDLPEDLEAHLEGDALEPSSTASMGHNIVWEVDFSPDGTRLVAANE 177

Query: 367 SGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLI 405
            G      V      +  +L+       + A  +SP GR + 
Sbjct: 178 DGTAVLWRVDDP--RELVVLLGAERRGRIAAARFSPDGRFVY 217



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 50/282 (17%), Positives = 88/282 (31%), Gaps = 52/282 (18%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D             I++E  FSP+  ++  A  D      ++ +D   +         R 
Sbjct: 145 DALEPSSTASMGHNIVWEVDFSPDGTRLVAANED--GTAVLWRVDDPRELVVLLGAERRG 202

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYS-------------------------------- 286
            I A RFS +G R + +     ++ IY                                 
Sbjct: 203 RIAAARFSPDG-RFVYTGGVQGSLRIYPALLEPLPEPEPEPPAPLPDLDAPPPEPSEPES 261

Query: 287 VDLQSNATERLTNTLFINISAS------YSPDSSQIVFESDREGKEQLYVMQSNG---SD 337
            D  +     L     I + +S      +S D   +   + R G   L+ +  +G     
Sbjct: 262 ADPDAPMLRELMPERTIPLRSSTINRLRFSADGRSLA-VATRLGAAMLFEIGEDGLPVRG 320

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT- 396
            +R         +    SP G  +A      +     V   DG    +LV   N    T 
Sbjct: 321 SRRTFPSDAGEMWTVDLSPDGRWLATGSRGTQGL---VWPLDGGPPVVLVGHGNDVFRTR 377

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +SP+G  L  +     D   +++     G +  L+ TP+ + 
Sbjct: 378 FSPAGTLLATASN---DGSVRIWPTQWGGLSRRLVPTPSGSR 416



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/336 (14%), Positives = 101/336 (30%), Gaps = 72/336 (21%)

Query: 159 SDDIYQSITGEKGDF--------NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           +D +Y ++    G +        + R+  V ++V SG       +               
Sbjct: 52  ADKVYTAVFSPDGRWVLTASRDHSVRLWPVPDAVPSGAEDEPAALRS-------IELRGN 104

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI------GNFRSMILAPR 264
           + +++   FSP+ ++VA A  D +  +     D         +          +++    
Sbjct: 105 EDLVWTAVFSPDGRRVASAGRDGKARVWDLPEDLEAHLEGDALEPSSTASMGHNIVWEVD 164

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDR 322
           FS +G R + +  +D    ++ VD        L          +A +SPD  + V+    
Sbjct: 165 FSPDGTRLV-AANEDGTAVLWRVD-DPRELVVLLGAERRGRIAAARFSPDG-RFVYTGGV 221

Query: 323 EGKEQLYVMQSNGSD-------------------------------------QKRISQDK 345
           +G  ++Y                                              +R    +
Sbjct: 222 QGSLRIYPALLEPLPEPEPEPPAPLPDLDAPPPEPSEPESADPDAPMLRELMPERTIPLR 281

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEK--FAIGV--MKKDGSQERLLVEDSNLQAPTWSPSG 401
            ++     +S  G  +A     G    F IG   +   GS+     +   +     SP G
Sbjct: 282 SSTINRLRFSADGRSLAVATRLGAAMLFEIGEDGLPVRGSRRTFPSDAGEMWTVDLSPDG 341

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           R L       G  G++     L+G    ++      
Sbjct: 342 RWLA-----TGSRGTQGLVWPLDGGPPVVLVGHGND 372



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 69/199 (34%), Gaps = 20/199 (10%)

Query: 193 LCVMDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYATYDD-------EDILRVYLMDT 244
           L  +D DG ++           ++   FSP+ + V  A+ D         D +     D 
Sbjct: 33  LWALDEDGRSLAPPLELPHADKVYTAVFSPDGRWVLTASRDHSVRLWPVPDAVPSGAEDE 92

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD------LQSNATERLT 298
                   +     ++    FS +G+R   S  +D    ++ +       L+ +A E  +
Sbjct: 93  PAALRSIELRGNEDLVWTAVFSPDGRRVA-SAGRDGKARVWDLPEDLEAHLEGDALEPSS 151

Query: 299 N---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                  I     +SPD +++V  ++ +G   L+ +         +  ++        +S
Sbjct: 152 TASMGHNIVWEVDFSPDGTRLV-AANEDGTAVLWRVDDPRELVVLLGAERRGRIAAARFS 210

Query: 356 PQGDLIAFTKFSGEKFAIG 374
           P G  + +T        I 
Sbjct: 211 PDGRFV-YTGGVQGSLRIY 228



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/249 (12%), Positives = 81/249 (32%), Gaps = 40/249 (16%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R   PS    ++    SP+ + +A  +   + ++            P  +    + +   
Sbjct: 322 RRTFPSDAGEMWTVDLSPDGRWLATGSRGTQGLVW-----PLDGGPPVVLVGHGNDVFRT 376

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERL------TNTLFINISA--SYSPD-SS 314
           RFS  G     +   D ++ I+        + RL      +     +     +++ D S 
Sbjct: 377 RFSPAGTLLA-TASNDGSVRIWPTQW-GGLSRRLVPTPSGSRGRSEDPKPPSTFAQDHSR 434

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            ++     +G+  L+ + ++   +  ++ +        V   +   +A T  +     + 
Sbjct: 435 GLLLAGYNDGRAYLFPVAADAPARPLVAFEGGPQGVFEVALHESGWLA-TALADGTIEVH 493

Query: 375 VMKK------------DGSQE----------RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
                            G +           RL    ++++A  + P+GR L F+    G
Sbjct: 494 ATDALLARAGAETPPGSGGELEPLRRPKPLARLPTPAADVRALRFDPTGRWL-FASHYGG 552

Query: 413 DTGSKLYSI 421
                ++ +
Sbjct: 553 TGQLSVWDL 561



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 37/117 (31%), Gaps = 13/117 (11%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + P    +   +  +G+  L+ +  +G      +        +  V+SP G  +      
Sbjct: 15  WHPSGRWLA-SAGFDGRALLWALDEDGRSLAPPLELPHADKVYTAVFSPDGRWVLTASRD 73

Query: 368 GEKFAIGVMK--KDGSQ--------ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                  V      G++          L   +  +    +SP GR +  S  +DG  
Sbjct: 74  HSVRLWPVPDAVPSGAEDEPAALRSIELRGNEDLVWTAVFSPDGRRVA-SAGRDGKA 129


>gi|170113608|ref|XP_001888003.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164637007|gb|EDR01296.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1188

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 49/354 (13%), Positives = 117/354 (33%), Gaps = 44/354 (12%)

Query: 113  TGRVIKEGKDRLRVEFR----LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            T R+      ++  E +    L +     Q   +    S     +I +  + ++   + G
Sbjct: 770  TVRIWNVTTGKVEAELKGHTDLVNSVAFSQDGSQVVSGSNDKTVRIWNVTTGEVEAELKG 829

Query: 169  EKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
               DF   + F  +S  VVSG    ++ + +     +          +    FS +  +V
Sbjct: 830  HT-DFVRSVAFSQDSSQVVSGSDDKTVRIWNVTTGEVEAELNGHTDCVRSVAFSQDSSQV 888

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
               + D      V + +         +     ++ +  FS +  R ++S   D+ + I+ 
Sbjct: 889  VSGSDDK----TVRIWNVTTGEVEAELKGHTDLVSSVAFSQDSSR-VVSGSDDKTVRIW- 942

Query: 287  VDLQSNATERL------------T---------NTLFINISASYSPDSSQIVFESDREGK 325
             ++ +    RL            T             I  S ++S D S++V  S     
Sbjct: 943  -NVTTGEPSRLWIGDKTVRIWNVTMGEVEAELKGHTNIVRSVAFSQDGSRVVSGSH---D 998

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            + + +      + +   +          +S  G  I  +  + +   +  +   G  E  
Sbjct: 999  KTVQIWNVMTGEVEAELKGHTDYVISVAFSQDGSRIV-SGSNNKTVRVWNVTM-GKVEAE 1056

Query: 386  LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            L   +   +  +S  G  +IF          +++++   G ++ ++ +     D
Sbjct: 1057 LTGHTVTSSVAFSQDGSQVIFGSHHK---TVQIWNL-TTGNSQAMLASNITLPD 1106



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/292 (13%), Positives = 101/292 (34%), Gaps = 18/292 (6%)

Query: 136 RKQIIGKKFFSSPASWRKIAHTISD-DIYQSITGEKGDFNSRILFVSE--SVVSGIIKNS 192
           +  +I K + +  +   K+   +SD      +  + G     + F  +   V+SG    +
Sbjct: 543 KNSVICKTYIADVSRVPKVTLGLSDSWDPAELILQNGSLVLSVAFSQDGSRVISGSYNGT 602

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L + +     +          +    FS +  +V   + D      V + +  +     +
Sbjct: 603 LRIWNVTTGKVEAELKGHTGCVNSVAFSQDGSQVVSGSNDK----TVQIWNVTMGEVEAK 658

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSP 311
           +      + +  FS +  + ++S   D+ + I+  ++ +   E +L     +  S ++S 
Sbjct: 659 LKGHTDFVRSVAFSQDSSQ-VVSGSDDKTVRIW--NVTTGEVEAKLKGHTDLVRSVAFSQ 715

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           DSSQ+V  SD    + + +      + +              +S     +  +    +  
Sbjct: 716 DSSQVVSGSD---DKTVRIWNVTTGEVEAELNGHTDLVKSVAFSQDSSQVV-SGSDDKTV 771

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            I  +     +  L      + +  +S  G  ++       D   +++++  
Sbjct: 772 RIWNVTTGKVEAELKGHTDLVNSVAFSQDGSQVV---SGSNDKTVRIWNVTT 820



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 75/217 (34%), Gaps = 11/217 (5%)

Query: 218 RFSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            + P    +      D   + +V L  +      + I    S++L+  FS +G R +IS 
Sbjct: 539 TWIPKNSVICKTYIADVSRVPKVTLGLSDSWDPAELILQNGSLVLSVAFSQDGSR-VISG 597

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +  + I++V         L        S ++S D SQ+V  S+    + + +      
Sbjct: 598 SYNGTLRIWNV-TTGKVEAELKGHTGCVNSVAFSQDGSQVVSGSN---DKTVQIWNVTMG 653

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           + +   +          +S     +  +    +   I  +     + +L      +++  
Sbjct: 654 EVEAKLKGHTDFVRSVAFSQDSSQVV-SGSDDKTVRIWNVTTGEVEAKLKGHTDLVRSVA 712

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +S     ++       D   +++++   G  E  +N 
Sbjct: 713 FSQDSSQVVSGSD---DKTVRIWNV-TTGEVEAELNG 745



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 89/261 (34%), Gaps = 33/261 (12%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            S  VVSG    ++ + +     +         ++    FS +  +V   + D      V 
Sbjct: 759  SSQVVSGSDDKTVRIWNVTTGKVEAELKGHTDLVNSVAFSQDGSQVVSGSNDK----TVR 814

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTN 299
            + +         +      + +  FS +  + ++S   D+ + I+  ++ +   E  L  
Sbjct: 815  IWNVTTGEVEAELKGHTDFVRSVAFSQDSSQ-VVSGSDDKTVRIW--NVTTGEVEAELNG 871

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                  S ++S DSSQ+V  SD    + + +      + +   +          +S    
Sbjct: 872  HTDCVRSVAFSQDSSQVVSGSD---DKTVRIWNVTTGEVEAELKGHTDLVSSVAFSQDSS 928

Query: 360  LIA----------FTKFSGEKFAIGVMKKD--------GSQERLLVEDSN-LQAPTWSPS 400
             +           +   +GE   + +  K         G  E  L   +N +++  +S  
Sbjct: 929  RVVSGSDDKTVRIWNVTTGEPSRLWIGDKTVRIWNVTMGEVEAELKGHTNIVRSVAFSQD 988

Query: 401  GRSLIFSRKKDGDTGSKLYSI 421
            G  ++       D   +++++
Sbjct: 989  GSRVVSGSH---DKTVQIWNV 1006


>gi|75908713|ref|YP_323009.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75702438|gb|ABA22114.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 778

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 59/168 (35%), Gaps = 10/168 (5%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +     SP+   +A  + D++    + L + R     + + +  + + A   S +G
Sbjct: 619 HSSAVHAVAISPDSTILASGSSDNK----IRLWNPRTGDPLRTLNSHDNEVKAIAISRDG 674

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +    S   D  + I+ + L       LT       S + SPD   +V  S       + 
Sbjct: 675 QFL-FSGSADTTIKIWHL-LTGQILHTLTGHSGDIKSLTTSPDGQFLVSSST---DTTIK 729

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           + + +  +         AS      SP G ++A +  + +   I  + 
Sbjct: 730 IWRISTGELLHTLTGHSASVNSVAISPDGTILA-SGSADQTIKIWQID 776



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 85/265 (32%), Gaps = 16/265 (6%)

Query: 161 DIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+ ++ITG  G   S  + +   V VSG    ++ + +     +          +     
Sbjct: 485 DLTKTITGHSGKVTSVDISLDGEVLVSGCTDQTVNIWNLQTGKLIRTLTGDLGEVSSVAI 544

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   +A  +        V +   +  +    +   +  +     S +G+         
Sbjct: 545 SPDGNFLAVGSGIHPKS-NVKIWHLKTGKLLHTLLGHQKPVNVVVISPDGQILA-----S 598

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            +  I   +LQ               + + SPDS+ +   S      ++ +      D  
Sbjct: 599 GSNKIKIWNLQKGDRICTLWHSSAVHAVAISPDSTILASGSS---DNKIRLWNPRTGDPL 655

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWS 398
           R     +        S  G  + F+  +     I      G     L     ++++ T S
Sbjct: 656 RTLNSHDNEVKAIAISRDGQFL-FSGSADTTIKIW-HLLTGQILHTLTGHSGDIKSLTTS 713

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDL 423
           P G+ L+ S     DT  K++ I  
Sbjct: 714 PDGQFLVSSST---DTTIKIWRIST 735



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 85/266 (31%), Gaps = 22/266 (8%)

Query: 162 IYQSITGEKGDFNSRILFVSES----VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           + +++TG+ G+ +S  +    +          K+++ +       + +      + +   
Sbjct: 528 LIRTLTGDLGEVSSVAISPDGNFLAVGSGIHPKSNVKIWHLKTGKLLHTLLGHQKPVNVV 587

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ Q +A          ++ + + +       +    S + A   S +    L S  
Sbjct: 588 VISPDGQILA------SGSNKIKIWNLQKGDRICTL-WHSSAVHAVAISPD-STILASGS 639

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + ++  + ++    R  N+    + A + S D  Q +F    +    + +      
Sbjct: 640 SDNKIRLW--NPRTGDPLRTLNSHDNEVKAIAISRDG-QFLFSGSAD--TTIKIWHLLTG 694

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                             SP G  +  +  +     I  +        L    +++ +  
Sbjct: 695 QILHTLTGHSGDIKSLTTSPDGQFLV-SSSTDTTIKIWRISTGELLHTLTGHSASVNSVA 753

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSID 422
            SP G  L        D   K++ ID
Sbjct: 754 ISPDGTILA---SGSADQTIKIWQID 776



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 55/168 (32%), Gaps = 10/168 (5%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
           Y          K I      + +   S +G   L+S   D+ ++I+  +LQ+    R LT
Sbjct: 477 YKRSLEYPDLTKTITGHSGKVTSVDISLDG-EVLVSGCTDQTVNIW--NLQTGKLIRTLT 533

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             L    S + SPD + +   S    K  + +               +      V SP G
Sbjct: 534 GDLGEVSSVAISPDGNFLAVGSGIHPKSNVKIWHLKTGKLLHTLLGHQKPVNVVVISPDG 593

Query: 359 DLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLI 405
            ++A          I +     G +   L   S + A   SP    L 
Sbjct: 594 QILA-----SGSNKIKIWNLQKGDRICTLWHSSAVHAVAISPDSTILA 636



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 65/207 (31%), Gaps = 21/207 (10%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ER 296
           V + + +  +  + +      + +   S +G    +        ++    L++       
Sbjct: 518 VNIWNLQTGKLIRTLTGDLGEVSSVAISPDGNFLAVGSGIHPKSNVKIWHLKTGKLLHTL 577

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWS 355
           L +   +N+    SPD   +       G  ++ +      D  RI +    ++      S
Sbjct: 578 LGHQKPVNVV-VISPDGQILA-----SGSNKIKIWNLQKGD--RICTLWHSSAVHAVAIS 629

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGD 413
           P   ++A          I +           +   + +  A   S  G+ L FS     D
Sbjct: 630 PDSTILASGSSDN---KIRLWNPRTGDPLRTLNSHDNEVKAIAISRDGQFL-FSGS--AD 683

Query: 414 TGSKLYSIDLNGRN-ETLINTPAYASD 439
           T  K++ + L G+   TL         
Sbjct: 684 TTIKIWHL-LTGQILHTLTGHSGDIKS 709


>gi|186680556|ref|YP_001863752.1| hypothetical protein Npun_R0006 [Nostoc punctiforme PCC 73102]
 gi|186463008|gb|ACC78809.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 2012

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 57/307 (18%), Positives = 115/307 (37%), Gaps = 75/307 (24%)

Query: 176  RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            R  F  ++V  G   NS+ + +RDG +I+ +      +     FSP+ Q +A  T   +D
Sbjct: 1309 RFSFDGQTVALGSSDNSIELQNRDGTHIKTIRGDSSIL----SFSPDNQTLA--TGSPDD 1362

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS---- 291
            IL+++ +DT  +   K   N  + I    FS +G     +   D  + ++     +    
Sbjct: 1363 ILKLWKLDTNKEITLKGSTNKITTI---DFSPDGNLVA-AASADNFVRLWRSSDGTFIGH 1418

Query: 292  --NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY-------------------- 329
                T+++TN        S+SP+S  I   SD + K QL+                    
Sbjct: 1419 LKGNTKQVTNV-------SFSPNSQIIATISD-DNKVQLWNSRDRSLIQALKTDSDKVTT 1470

Query: 330  -------------------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
                               + +S+G+  K +     A      +SP    +     +  +
Sbjct: 1471 VIFSHDSKMLAICDDNLVKLYKSDGTPVKPLI-GHNAKVQSVEFSPDDKKLMSVSANSGE 1529

Query: 371  FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI------DLN 424
              I       S+    +++  + +  ++P+G+ +      + +   KL+++       L 
Sbjct: 1530 IKIW--DISNSEPLQSIDNYGMISAKFNPNGKYI---TSINQNYTVKLWTVEGEPRATLK 1584

Query: 425  GRNETLI 431
            G N+T+ 
Sbjct: 1585 GHNDTIT 1591



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 89/237 (37%), Gaps = 34/237 (14%)

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             D  +    FSP+ + +A A+ D   +++++ +D     + +R      +    RFS +G
Sbjct: 1257 HDDSITYTSFSPDSKLLASASKD--GVVKIWDIDDNKLPSFQRTDRDEDINRKIRFSFDG 1314

Query: 270  KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +   +    +    I   +      + +     I    S+SPD+  +      +   +L+
Sbjct: 1315 QTVALGSSDN---SIELQNRDGTHIKTIRGDSSI---LSFSPDNQTLA-TGSPDDILKLW 1367

Query: 330  VMQSNGSDQKRISQDKEAS-YFDPVWSPQGDLIA------FTKFSGEKFAIGVMKKDGSQ 382
             + +N    K I+     +      +SP G+L+A      F +         +    G+ 
Sbjct: 1368 KLDTN----KEITLKGSTNKITTIDFSPDGNLVAAASADNFVRLWRSSDGTFIGHLKGNT 1423

Query: 383  ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            +++          ++SP+ + +        D   +L+    N R+ +LI      SD
Sbjct: 1424 KQVT-------NVSFSPNSQIIATISD---DNKVQLW----NSRDRSLIQALKTDSD 1466



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 81/219 (36%), Gaps = 27/219 (12%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            +  +D +       T   + I  + RFS + Q VA  + D+   L+        +R    
Sbjct: 1284 IWDIDDNKLPSFQRTDRDEDINRKIRFSFDGQTVALGSSDNSIELQ--------NRDGTH 1335

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ-----SNATERLTNTLFINISA 307
            I   R       FS + +    +   D+ + ++ +D         +T ++T    I+   
Sbjct: 1336 IKTIRGDSSILSFSPDNQTLA-TGSPDDILKLWKLDTNKEITLKGSTNKITT---ID--- 1388

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +SPD + +   S  +   +L+   S+G+    +  + +    +  +SP   +IA     
Sbjct: 1389 -FSPDGNLVAAAS-ADNFVRLWR-SSDGTFIGHLKGNTKQ-VTNVSFSPNSQIIATIS-D 1443

Query: 368  GEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLI 405
              K  +    +D S  + L  +   +    +S   + L 
Sbjct: 1444 DNKVQLW-NSRDRSLIQALKTDSDKVTTVIFSHDSKMLA 1481



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 67/190 (35%), Gaps = 15/190 (7%)

Query: 176  RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            R     ++V S    +SL + D  G  +  L    D +     FSPN++ +A A+ D   
Sbjct: 1750 RFSLNKKTVASVSKDDSLKLWDLKGKPLATLWGHTDWVNSV-AFSPNKKIIASASDD--K 1806

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             +R +    R  +  K I      + +  F+ +GK    S   D+ + ++  +L     +
Sbjct: 1807 TVRFW---NRNGKLLKPIIKHGDKVNSVSFTHDGKIIA-SASDDQIIRLW--NLDGKLQK 1860

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                      +  +  D  +I F S    K    +   +    + +  D   S     + 
Sbjct: 1861 PTIRDPDKITNIRFQADDKKIAFISGSSAK----LGNLDNGKIEPLKTD--YSSNTLSFD 1914

Query: 356  PQGDLIAFTK 365
                ++A   
Sbjct: 1915 NDNKMLAVGS 1924



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 36/249 (14%), Positives = 82/249 (32%), Gaps = 33/249 (13%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDT-R 245
                ++ +   +G   R      +  + +  FS +  K+  ++ D+   I  +  +   +
Sbjct: 1565 NQNYTVKLWTVEGE-PRATLKGHNDTITKVDFSHDGTKIVTSSADNTIKIWDINQLLLKK 1623

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFIN 304
             +  P  +      +    FS + K    S   D  ++IY  +   N  ++L+  +  IN
Sbjct: 1624 YNYEPLTLQKHIKGVNDVAFSFDNKYIA-SASADNTVNIY--NGNGNFIKQLSGFSNGIN 1680

Query: 305  IS-----ASYSPDSSQIVFESDRE-GKEQLYVMQS--------NGSDQKRISQDKEASYF 350
                    S+S D   I   S +     ++Y  +         + +  + +   K  + F
Sbjct: 1681 DDISIDKVSFSSDGKIIGATSCKTYWSNEIYRSKYVMKFWSIEDSAKFQELKSIKGHANF 1740

Query: 351  DP-------VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGR 402
                      +S     +A          + +    G     L      + +  +SP+ +
Sbjct: 1741 SCNNIDSFIRFSLNKKTVASVSKDDS---LKLWDLKGKPLATLWGHTDWVNSVAFSPN-K 1796

Query: 403  SLIFSRKKD 411
             +I S   D
Sbjct: 1797 KIIASASDD 1805


>gi|260595843|ref|YP_003208414.1| hypothetical protein CTU_00510 [Cronobacter turicensis z3032]
 gi|260215020|emb|CBA26694.1| Uncharacterized protein yidR [Cronobacter turicensis z3032]
          Length = 420

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 59/161 (36%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLT-----NTLFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
             +D            RLT         +  +   +   +P  ++I F  +D  G  QL+
Sbjct: 267 GTLDAMPAPPAGVMQRRLTFTHDRRYPGLAATPRHWVRSNPQGTEIAFLMNDDNGVAQLW 326

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++   G + ++++Q  +       W P G+ + F + +     I +      +   L   
Sbjct: 327 LISPAGGEPRQVTQGAQGVASAFSWHPSGEALGFMQDN----RIVLCDAQTGEITPLTPP 382

Query: 390 SN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                   A   SP G+ + + ++ DG    +++ +   GR
Sbjct: 383 QTAAISADAVVISPDGKRIAWMQETDGFR--QIW-MTETGR 420



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   ++A+   DD  + +++L+        +     + +  A  +  +G+         +
Sbjct: 307 PQGTEIAFLMNDDNGVAQLWLISPAGGEPRQVTQGAQGVASAFSWHPSGEALGFM----Q 362

Query: 281 AMDIYSVDLQSNATERLT--NTLFINISA-SYSPDSSQIVFESDREGKEQLYVM 331
              I   D Q+     LT   T  I+  A   SPD  +I +  + +G  Q+++ 
Sbjct: 363 DNRIVLCDAQTGEITPLTPPQTAAISADAVVISPDGKRIAWMQETDGFRQIWMT 416



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 34/97 (35%), Gaps = 9/97 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++   G   R +T     +     + P+ + + +   +     R+ L D +      
Sbjct: 324 QLWLISPAGGEPRQVTQGAQGVASAFSWHPSGEALGFMQDN-----RIVLCDAQTGEIT- 377

Query: 252 RIGNFRSMIL---APRFSSNGKRALISVQKDEAMDIY 285
            +   ++  +   A   S +GKR     + D    I+
Sbjct: 378 PLTPPQTAAISADAVVISPDGKRIAWMQETDGFRQIW 414


>gi|332798918|ref|YP_004460417.1| copper amine oxidase-like domain-containing protein
           [Tepidanaerobacter sp. Re1]
 gi|332696653|gb|AEE91110.1| copper amine oxidase-like domain-containing protein
           [Tepidanaerobacter sp. Re1]
          Length = 571

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 80/256 (31%), Gaps = 32/256 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + + ++Y  Y   +    YL   R D       +   +   P +S    R   +V K
Sbjct: 198 WSADGEWLSY-KYASSESAPAYLWVVRADGKAASQVDTEPIYGDPLWSPKDDRIAYTVMK 256

Query: 279 D--------EAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIV--FESDREGKEQ 327
           D          +    +  +      L     I I S ++ P    I   F    E    
Sbjct: 257 DSTDGYIPAGVVRYADITAEGIKANTLLEEDSITIPSLAWHPGGESITISFPRTAEQPPT 316

Query: 328 LYVMQSNGSDQKRISQDKEA----------SYFDPVWSPQGDLIAF------TKFSGEKF 371
           L  +   G      +   EA          ++    WSP G  +A+      +  + +  
Sbjct: 317 LVQVNLAGEQTVLYTLKDEAPMDLEGIYSWAFISLKWSPDGRHLAYHLGVNSSSITADSV 376

Query: 372 AIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSR--KKDGDTGSKLYSIDLNGRNE 428
             GV+     Q   L      LQ   +SP    L +     +D      L  +DL     
Sbjct: 377 ETGVLNVKTGQSLNLSGGLKYLQWLAFSPDNTKLAYIAGGGRDVMLNKSLEIVDLISGKI 436

Query: 429 TLINTPAYA-SDPQWV 443
           T  +   YA + P W+
Sbjct: 437 TDYSQKGYADTQPIWL 452



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/314 (14%), Positives = 93/314 (29%), Gaps = 48/314 (15%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G          +   S      L V+  DG     +    + I  +P +SP   ++AY  
Sbjct: 197 GWSADGEWLSYKYASSESAPAYLWVVRADGKAASQV--DTEPIYGDPLWSPKDDRIAYTV 254

Query: 231 YDDEDILRV------YLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQK--DEA 281
             D     +      Y   T        +    S+ + +  +   G+   IS  +  ++ 
Sbjct: 255 MKDSTDGYIPAGVVRYADITAEGIKANTLLEEDSITIPSLAWHPGGESITISFPRTAEQP 314

Query: 282 MDIYSVDLQSNATERLT-------NTLFINISAS----YSPDSSQIVF------ESDREG 324
             +  V+L    T   T       +   I   A     +SPD   + +       S    
Sbjct: 315 PTLVQVNLAGEQTVLYTLKDEAPMDLEGIYSWAFISLKWSPDGRHLAYHLGVNSSSITAD 374

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG----VMKKDG 380
             +  V+         +S   +       +SP    +A+    G    +     ++    
Sbjct: 375 SVETGVLNVKTGQSLNLSGGLKY-LQWLAFSPDNTKLAYIAGGGRDVMLNKSLEIVDLIS 433

Query: 381 SQERLLVEDSNLQ-APTWSPS-GRSLIFSRKKDGDT-------------GSKLYSIDLNG 425
            +     +       P W  +    L+F R  + +T               ++Y ++ +G
Sbjct: 434 GKITDYSQKGYADTQPIWLSNKTNELLFCRGPEAETLYLSEILPGTLVPNQRIYKLNKDG 493

Query: 426 RNETLINTPAYASD 439
               +   PA  +D
Sbjct: 494 NAVPVTAGPADTAD 507



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 68/188 (36%), Gaps = 27/188 (14%)

Query: 218 RFSPNQQKVAY-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           ++SP+ + +AY     ++    D +   +++ +  ++    G  + +     FS +  + 
Sbjct: 352 KWSPDGRHLAYHLGVNSSSITADSVETGVLNVKTGQSLNLSGGLKYLQWL-AFSPDNTKL 410

Query: 273 LISVQKDE----AMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREG--- 324
                          +  VDL S      +   + +    + S  +++++F    E    
Sbjct: 411 AYIAGGGRDVMLNKSLEIVDLISGKITDYSQKGYADTQPIWLSNKTNELLFCRGPEAETL 470

Query: 325 ------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKF 371
                        +++Y +  +G+     +   + + + P  S  G+ I F +    ++ 
Sbjct: 471 YLSEILPGTLVPNQRIYKLNKDGNAVPVTAGPADTADYFPNPSSSGEEIIFLRLERYDQG 530

Query: 372 AIGVMKKD 379
           ++ +   +
Sbjct: 531 SLYLQPIN 538



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 24/62 (38%)

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            + L +   ++   WS  G  L +         + L+ +  +G+  + ++T     DP W
Sbjct: 184 PKQLTDSGYVELIGWSADGEWLSYKYASSESAPAYLWVVRADGKAASQVDTEPIYGDPLW 243

Query: 443 VG 444
             
Sbjct: 244 SP 245



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 36/105 (34%), Gaps = 8/105 (7%)

Query: 317 VFESDREGKEQLYVMQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEK 370
            F +     ++  +   +G       K+++           WS  G+ +++         
Sbjct: 159 AFNAVVAYTDKGNLWLLDGRKRDVLPKQLTDSGYVELIG--WSADGEWLSYKYASSESAP 216

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             + V++ DG     +  +     P WSP    + ++  KD   G
Sbjct: 217 AYLWVVRADGKAASQVDTEPIYGDPLWSPKDDRIAYTVMKDSTDG 261


>gi|322835172|ref|YP_004215198.1| oligogalacturonide lyase [Rahnella sp. Y9602]
 gi|321170373|gb|ADW76071.1| Oligogalacturonide lyase [Rahnella sp. Y9602]
          Length = 393

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 80/226 (35%), Gaps = 29/226 (12%)

Query: 241 LMDTRIDRAPKRIGN-----FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           + D +      R+        R+      F+ +G + L + + D   + Y +DL++    
Sbjct: 14  VQDPQTGARVTRLTPPDVLCHRNYFYQKCFTRDGNKLLFAGEFDGNRNYYLLDLKTQNAV 73

Query: 296 RLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDP 352
           +LT     N    + SPD   + +  +    +++ +   +     ++        ++   
Sbjct: 74  QLTEGKGDNTFGGFLSPDDQYLYYVKNERSLQRVKLADFSEHTVYQVPEEWVGYGTWVAN 133

Query: 353 V--------------WSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNL-QAP 395
                          W+P  D   F  F        +++ D    + R++ E +     P
Sbjct: 134 SECTRLVGIEISREDWTPLSDWKIFQAFYHSNPHCRLLRVDLLSGKSRVIHEKNEWLGHP 193

Query: 396 TWSP-SGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLI--NTPAYA 437
            + P    ++ F  +   D   ++++ ++ +G N   +  + P  +
Sbjct: 194 IYRPFDDNTVAFCHEGPHDLVDARMWLVNEDGSNVRKVKEHAPGES 239



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 95/269 (35%), Gaps = 31/269 (11%)

Query: 197 DRDGANIRYLTPS----RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            + GA +  LTP          ++  F+ +  K+ +A   D +    YL+D +   A + 
Sbjct: 17  PQTGARVTRLTPPDVLCHRNYFYQKCFTRDGNKLLFAGEFDGN-RNYYLLDLKTQNAVQL 75

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--------------- 297
                        S + +       +     +   D   +   ++               
Sbjct: 76  TEGKGDNTFGGFLSPDDQYLYYVKNERSLQRVKLADFSEHTVYQVPEEWVGYGTWVANSE 135

Query: 298 -TNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVW 354
            T  + I IS   ++P S   +F++         +++ +  S + R+  +K      P++
Sbjct: 136 CTRLVGIEISREDWTPLSDWKIFQAFYHSNPHCRLLRVDLLSGKSRVIHEKNEWLGHPIY 195

Query: 355 SP-QGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFS 407
            P   + +AF            + ++ +DGS  R + E +  ++ T   W P G +L++ 
Sbjct: 196 RPFDDNTVAFCHEGPHDLVDARMWLVNEDGSNVRKVKEHAPGESCTHEFWVPDGSALMYV 255

Query: 408 RKKDGDTGSKLYSIDL-NGRNETLINTPA 435
               G     +   D   G +  L+  PA
Sbjct: 256 SYLKGQHDRHIRRFDPQTGEDVCLMTMPA 284



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/335 (11%), Positives = 92/335 (27%), Gaps = 53/335 (15%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY-QSITGEKG-------DFNSRIL 178
            + L D+K +  +   +                DD Y   +  E+        DF+   +
Sbjct: 61  NYYLLDLKTQNAV---QLTEGKGDNTFGGFLSPDDQYLYYVKNERSLQRVKLADFSEHTV 117

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +       G       V + +   +  +  SR+       ++P      +  +   +   
Sbjct: 118 YQVPEEWVG---YGTWVANSECTRLVGIEISRED------WTPLSDWKIFQAFYHSNPHC 168

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MDIYSVDLQSNAT 294
             L    +    + I      +  P +   +        +         ++ V+   +  
Sbjct: 169 RLLRVDLLSGKSRVIHEKNEWLGHPIYRPFDDNTVAFCHEGPHDLVDARMWLVNEDGSNV 228

Query: 295 ERLTNTLFIN--ISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQ------- 343
            ++             + PD S +++ S  +G+    +        +   +         
Sbjct: 229 RKVKEHAPGESCTHEFWVPDGSALMYVSYLKGQHDRHIRRFDPQTGEDVCLMTMPACSHL 288

Query: 344 ----DKEASYFDPVWSP-QGDLIAFTKFSGEKFAIGVMKKDGSQE----------RLLVE 388
               +      D   +P      A      + + + +      Q           ++L  
Sbjct: 289 MSNENGTLLVGDGSGTPVDVKDTASHTIENDPW-LYIFDAKTRQHAPLAAHNSSWQVLDG 347

Query: 389 DS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           D       P++SP  R ++F+   +G     L  I
Sbjct: 348 DRQVTHPHPSFSPDDRHVLFTTDYEGLPALYLAEI 382



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 62/185 (33%), Gaps = 25/185 (13%)

Query: 288 DLQSNA-TERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           D Q+ A   RLT               ++ D ++++F  + +G    Y++     +  ++
Sbjct: 16  DPQTGARVTRLTPPDVLCHRNYFYQKCFTRDGNKLLFAGEFDGNRNYYLLDLKTQNAVQL 75

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAPT- 396
           ++ K  + F    SP    + + K       + +          + E+        A + 
Sbjct: 76  TEGKGDNTFGGFLSPDDQYLYYVKNERSLQRVKLADFSEHTVYQVPEEWVGYGTWVANSE 135

Query: 397 -------------WSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQW 442
                        W+P     IF      +   +L  +D L+G++  +     +   P +
Sbjct: 136 CTRLVGIEISREDWTPLSDWKIFQAFYHSNPHCRLLRVDLLSGKSRVIHEKNEWLGHPIY 195

Query: 443 VGFMD 447
             F D
Sbjct: 196 RPFDD 200


>gi|295688691|ref|YP_003592384.1| peptidase S9b dipeptidylpeptidase IV domain-containing protein
           [Caulobacter segnis ATCC 21756]
 gi|295430594|gb|ADG09766.1| peptidase S9B dipeptidylpeptidase IV domain protein [Caulobacter
           segnis ATCC 21756]
          Length = 740

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 44/302 (14%), Positives = 81/302 (26%), Gaps = 87/302 (28%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAP------------- 263
             SP+ ++V Y     E      L    +    P R+ +  ++                 
Sbjct: 44  ALSPDGKRVTYLKGKPEAANVQDLWAADVKGGEPYRLIDSAALSSGTKELSEAEKARRER 103

Query: 264 ------------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                        +   G+  L+ +  D    +Y   +      RLT T    + A  SP
Sbjct: 104 ARVAATRGIVEYSWDKQGRFILVPLDGD----LYLDSVADGKVTRLTETPGDEVDAKVSP 159

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WS 355
               + +  D    + LY+  + G  +  ++ D + +                     WS
Sbjct: 160 KGGYVSYVRD----QNLYIKPATGGAETALTTDGKDALSFGTAEFIAQEELDRFTGYWWS 215

Query: 356 PQGDLIAFTKFSGEKFAI------------------------------GVMKKDGSQERL 385
           P    I +T+       I                               V      + R 
Sbjct: 216 PDEARIVYTRVDESGVDIVPRADIGPSGATIVNQRYPRAGRPNAVVELFVRDLTSGEVRK 275

Query: 386 LVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           L   +N         WS  G+++   R         L + D       +I T    +DP 
Sbjct: 276 LDLGANKDIYLARVDWSADGKTVYVQRLSRDQKTLDLIAFDAATAKGRVILT---QTDPH 332

Query: 442 WV 443
           ++
Sbjct: 333 YI 334



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 112/359 (31%), Gaps = 62/359 (17%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           +F   P        +++D     +T   GD     +      VS +   +L +    G  
Sbjct: 122 RFILVPLDGDLYLDSVADGKVTRLTETPGDEVDAKVSPKGGYVSYVRDQNLYIKPATGGA 181

Query: 203 IRYLTPSRDQILFEPR----------------FSPNQQKVAYATYDDEDILRVYLMDTRI 246
              LT      L                    +SP++ ++ Y   D+  +  V   D   
Sbjct: 182 ETALTTDGKDALSFGTAEFIAQEELDRFTGYWWSPDEARIVYTRVDESGVDIVPRADIGP 241

Query: 247 DRAPKR------------------------------IGNFRSMILA-PRFSSNGKRALIS 275
             A                                 +G  + + LA   +S++GK   + 
Sbjct: 242 SGATIVNQRYPRAGRPNAVVELFVRDLTSGEVRKLDLGANKDIYLARVDWSADGKTVYVQ 301

Query: 276 -VQKDE-AMDIYSVDLQSNATERL---TNTLFINISASYSP--DSSQIVFESDREGKEQL 328
            + +D+  +D+ + D  +     +   T+  +I ++  + P  D S  ++ S+++G   L
Sbjct: 302 RLSRDQKTLDLIAFDAATAKGRVILTQTDPHYIEVADDFHPLKDGS-FLWSSEQDGDRHL 360

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGVMKKDG---SQER 384
           Y   ++G    +I++  +          +   +A FT          + +       + +
Sbjct: 361 YRYAADGKLIAQITK-GDWPVSALEGVDEARKVALFTAAMDTPIERRLYEVSYAKPGKPK 419

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQW 442
            L           +P+G +       D  T  +      +G+    I     A   P W
Sbjct: 420 ALTAAGGWWKVKVAPNGGAFA-GTYDDPKTPPQTALYSADGKRVRWIEENKLAEGHPYW 477


>gi|170781495|ref|YP_001709827.1| putative dipeptidyl-peptidase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156063|emb|CAQ01200.1| putative dipeptidyl-peptidase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 697

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 64/158 (40%), Gaps = 14/158 (8%)

Query: 249 APKRIGNFRSMIL---APRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTL 301
            P+ +       L   A   S +G+  +++V    ++ +   + S+D+ +     L +  
Sbjct: 225 RPRDLTPRPGRTLDHAAAAISPDGRTLVVAVGVKERRGDRQALVSIDVATGERTTLLDVP 284

Query: 302 FINIS-ASYSPDSSQIVF-ESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +++   + SPD + + +  +DR       +++++V   +GS  +R++   +       +
Sbjct: 285 GVDLEMPAISPDGALLAYMRTDRATPAAPTQQEIWVSALDGSGARRVAAGWDRWPSSLRF 344

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                 +  T     +  +  +  D +  +L+ +D   
Sbjct: 345 DADSQGLVVTADQDGRGPVFRIGLDDAVTQLMTDDHTY 382



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 64/194 (32%), Gaps = 18/194 (9%)

Query: 208 PSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           P R         SP+ + +           D   +  +D         +      +  P 
Sbjct: 233 PGRTLDHAAAAISPDGRTLVVAVGVKERRGDRQALVSIDVATGERTTLLDVPGVDLEMPA 292

Query: 265 FSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQ 315
            S +G           +       +I+   L  +   R+      +   S   +  DS  
Sbjct: 293 ISPDGALLAYMRTDRATPAAPTQQEIWVSALDGSGARRV--AAGWDRWPSSLRFDADSQG 350

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-GDLIAF-TKFSGEKFAI 373
           +V  +D++G+  ++ +  + +  + ++ D   +Y D    P  GD++A  + +      +
Sbjct: 351 LVVTADQDGRGPVFRIGLDDAVTQLMTDD--HTYTDVQVDPGTGDVVALRSSWMAPAHPV 408

Query: 374 GVMKKDGSQERLLV 387
            V   DGS   L  
Sbjct: 409 RVSAADGSVTELAT 422



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 43/108 (39%), Gaps = 16/108 (14%)

Query: 265 FSSNGKRALISV------QKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIV 317
            S +G+RA+++V      +      +++V         RLT +      A+++     ++
Sbjct: 9   LSPDGRRAVLTVTTLDAARTGYRHALWAVPASGGGVPRRLTRSAKSEAGAAFTASGD-LL 67

Query: 318 FESDREGKE--------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           F S R   +        QL+++ ++G + + +++           +  
Sbjct: 68  FVSSRPDADDAEEKDAAQLWILPADGGEARALTRLAGGVDGIAAVARD 115



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 11/104 (10%)

Query: 348 SYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSG 401
            +     SP G  +       +  G++ A+  +     +   L++    +L+ P  SP G
Sbjct: 238 DHAAAAISPDGRTLVVAVGVKERRGDRQALVSIDVATGERTTLLDVPGVDLEMPAISPDG 297

Query: 402 RSLIFSRKK----DGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             L + R         T  +++   L+G     +    +   P 
Sbjct: 298 ALLAYMRTDRATPAAPTQQEIWVSALDGSGARRVA-AGWDRWPS 340


>gi|152972597|ref|YP_001337743.1| hypothetical protein KPN_04093 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150957446|gb|ABR79476.1| hypothetical protein KPN_04093 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 408

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 57/162 (35%), Gaps = 23/162 (14%)

Query: 280 EAMDIYSVDLQSNATERLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQLY 329
                        +  RLT T        +N+   +   +P ++ I F   D  G  QL+
Sbjct: 255 GTATTMPAPPAGVSQRRLTFTHHRRYPGLVNVPRHWVRANPQATAIAFLMRDDAGVVQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++   G + ++++           W P G+ + F         I            L + 
Sbjct: 315 LISPQGGEPRQLTHHASGIQSAFNWHPSGEWLGFALED----RIACCHAGTGDITFLTDT 370

Query: 390 SNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +  AP+     +SP G+ + +  + DG    +L+ +   GR
Sbjct: 371 -HAHAPSADAIVFSPDGKQIAWMEEVDGYR--QLW-VTQTGR 408



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  +++++L+  +     +   +   +  A  +  +G+    +++   
Sbjct: 295 PQATAIAFLMRDDAGVVQLWLISPQGGEPRQLTHHASGIQSAFNWHPSGEWLGFALE--- 351

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I      +     LT+T     SA    +SPD  QI +  + +G  QL+V 
Sbjct: 352 -DRIACCHAGTGDITFLTDTHAHAPSADAIVFSPDGKQIAWMEEVDGYRQLWVT 404


>gi|282881407|ref|ZP_06290083.1| WD40-like protein [Prevotella timonensis CRIS 5C-B1]
 gi|281304705|gb|EFA96789.1| WD40-like protein [Prevotella timonensis CRIS 5C-B1]
          Length = 629

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 46/139 (33%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +   D A  +          + P FS ++  + Y   +  D   +             + 
Sbjct: 490 IAIYDIATEKQTQFKDGVECWRPLFSNDECYIYYIQKETHDSHFIIKQYDVTTGEKSIVL 549

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                I     S +GK    +  KD   D++  D +   + ++T+T+      ++     
Sbjct: 550 KQPFDIWDIAVSPSGKYIAYAGNKDANWDLFIYDTKHKHSRQITHTIGDEWDPAFGVSDD 609

Query: 315 QIVFESDREGKEQLYVMQS 333
           ++ F       + +Y ++ 
Sbjct: 610 ELWFAGVFGFNDGIYHVRL 628



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 78/234 (33%), Gaps = 15/234 (6%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P    +   V       E    +  ++   +   + +    S ++ P  SS+G+  + +
Sbjct: 377 YPTIHADGTMV--YQSQTEHYYTINRLNIN-NGNREELWRGVSELVHPMISSDGRYLVFT 433

Query: 276 V--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQLYV 330
              Q+    D+   D   N    +            S  +++I F     D     Q+ +
Sbjct: 434 EGEQESLNTDVVLYDFLKNNQIAINKKPTKGSIPCISKSATKIAFPCWTLDET-IPQIAI 492

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERL-LV 387
                  Q +     E   + P++S     I + +       F I        ++ + L 
Sbjct: 493 YDIATEKQTQFKDGVE--CWRPLFSNDECYIYYIQKETHDSHFIIKQYDVTTGEKSIVLK 550

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +  ++     SPSG+ + ++  KD +    +Y    +  +  + +T     DP 
Sbjct: 551 QPFDIWDIAVSPSGKYIAYAGNKDANWDLFIYDTK-HKHSRQITHTIGDEWDPA 603



 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 42/323 (13%), Positives = 96/323 (29%), Gaps = 39/323 (12%)

Query: 128 FRLWDVKDRKQIIGKKF--FSSPASWRKIAHT-ISDDIYQSITGEKGDFNSRILFVSESV 184
            +L+D+   +    K F  F+       + H  I++ + + ++   G +        E  
Sbjct: 318 MQLYDL-TAEFCHSKTFPFFAHDEHMNVVGHQLIAERLVEEMSSISGKY--------EYQ 368

Query: 185 VSGIIKNSLCVMDRDGA-------------NIRYLTPSRDQILF-------EPRFSPNQQ 224
             G        +  DG              N   +     + L+        P  S + +
Sbjct: 369 SEGNFHERYPTIHADGTMVYQSQTEHYYTINRLNINNGNREELWRGVSELVHPMISSDGR 428

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAM 282
            + +   + E +    ++   +      I    +    P  S +  +         +   
Sbjct: 429 YLVFTEGEQESLNTDVVLYDFLKNNQIAINKKPTKGSIPCISKSATKIAFPCWTLDETIP 488

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRI 341
            I   D+ +    +  + +       +S D   I +           + Q +  + +K I
Sbjct: 489 QIAIYDIATEKQTQFKDGV-ECWRPLFSNDECYIYYIQKETHDSHFIIKQYDVTTGEKSI 547

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPS 400
              +    +D   SP G  IA+       + + +        R +     +   P +  S
Sbjct: 548 VLKQPFDIWDIAVSPSGKYIAYAGNKDANWDLFIYDTKHKHSRQITHTIGDEWDPAFGVS 607

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL 423
              L F+     + G  +Y + L
Sbjct: 608 DDELWFAGVFGFNDG--IYHVRL 628


>gi|17232051|ref|NP_488599.1| WD-40 repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17133695|dbj|BAB76258.1| WD-40 repeat-protein [Nostoc sp. PCC 7120]
          Length = 786

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 58/174 (33%), Gaps = 14/174 (8%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
           Y          K I      + +   S +G   ++S   D+ ++I+  +LQ+    R LT
Sbjct: 477 YKRSLEYPYLTKTITGHSGKVKSVAISPDG-EVIVSGCTDQTVNIW--NLQTGKLIRTLT 533

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             L    S + SPD + +   S    +  + V               +      V SP G
Sbjct: 534 GNLGEVSSVAISPDGNFLAVGSGVHPRSNVKVWHLKTGKLLHTLLGHQKPVNVVVISPDG 593

Query: 359 DLIAFTKFSGEKFAIG-VMKKDGSQERL------LVEDSNLQAPTWSPSGRSLI 405
            ++A       K  I  + K DG    +      L   S + A   SP    L 
Sbjct: 594 QILA---SGSNKIKIWNLQKGDGVPPTVGDRICTLWHSSAVHAIAISPDSTILA 644



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 84/270 (31%), Gaps = 24/270 (8%)

Query: 164 QSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           ++ITG  G   S  +     V VSG    ++ + +     +          +     SP+
Sbjct: 488 KTITGHSGKVKSVAISPDGEVIVSGCTDQTVNIWNLQTGKLIRTLTGNLGEVSSVAISPD 547

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              +A  +        V +   +  +    +   +  +     S +G+          + 
Sbjct: 548 GNFLAVGSGVHPRS-NVKVWHLKTGKLLHTLLGHQKPVNVVVISPDGQILA-----SGSN 601

Query: 283 DIYSVDLQSNATERLTNTLFINISA--------SYSPDSSQIVFESDREGKEQLYVMQSN 334
            I   +LQ       T    I            + SPDS+ +   S      ++ +    
Sbjct: 602 KIKIWNLQKGDGVPPTVGDRICTLWHSSAVHAIAISPDSTILASGSS---DNKIRLWNPR 658

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQ 393
             D  R     +        S  G  + F+  +     I      G     L     +++
Sbjct: 659 TGDPLRTLNSHDNEVKAIAISRDGQFL-FSGSADTTIKIW-HLITGQILHTLTGHSGDIK 716

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           + T SP+G+ L FS     DT  K++ I  
Sbjct: 717 SLTTSPNGQFL-FSGS--ADTTIKIWRIST 743



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 74/245 (30%), Gaps = 20/245 (8%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                 ++++ V       + +      + +     SP+ Q +A       + ++++ + 
Sbjct: 554 GSGVHPRSNVKVWHLKTGKLLHTLLGHQKPVNVVVISPDGQILA----SGSNKIKIWNLQ 609

Query: 244 TRIDRAPKR-----IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
                 P            S + A   S +    L S   D  + ++  + ++    R  
Sbjct: 610 KGDGVPPTVGDRICTLWHSSAVHAIAISPD-STILASGSSDNKIRLW--NPRTGDPLRTL 666

Query: 299 NTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           N+    + A + S D  Q +F    +    + +                        SP 
Sbjct: 667 NSHDNEVKAIAISRDG-QFLFSGSAD--TTIKIWHLITGQILHTLTGHSGDIKSLTTSPN 723

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  + F+  +     I  +        L    +++ +   SP G  L        D   K
Sbjct: 724 GQFL-FSGSADTTIKIWRISTGELLHTLTGHSASVNSVAISPGGNLLA---SGSADQTIK 779

Query: 418 LYSID 422
           ++ ID
Sbjct: 780 IWQID 784


>gi|114797957|ref|YP_761637.1| S9A/B/C family peptidase [Hyphomonas neptunium ATCC 15444]
 gi|114738131|gb|ABI76256.1| peptidase, S9A/B/C family [Hyphomonas neptunium ATCC 15444]
          Length = 656

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 61/167 (36%), Gaps = 8/167 (4%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLY 329
            LI+ +  +   ++ V     A  +LT       +A+ SP     +F  D+ G    Q Y
Sbjct: 86  MLITTRFGDTNQLHEVTSPGGARRQLTFFDETVGNATVSPQGGTFLFARDKGGDEYYQGY 145

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---KKDGSQERLL 386
                       ++    +   P+WS QG L A+ +         ++     D +  R+ 
Sbjct: 146 RFDMETGRITGFTEPGTRN-GAPLWSDQGTLAAWARTHPGDPNNDIIIGNPADPASVRVA 204

Query: 387 VEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +E      P  WS  G  L+  R       S L+ +D+     T IN
Sbjct: 205 LEGEGAIGPVDWSDDGSKLLLQRYIS-IAESHLFILDVASGTLTQIN 250



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 87/270 (32%), Gaps = 20/270 (7%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           G+  + +  R  D     ++      +SP   R+      + +  +    +G       F
Sbjct: 82  GEGGMLITTRFGDTNQLHEV------TSPGGARRQLTFFDETVGNATVSPQGG-----TF 130

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +      G         D +   I   T    +    P +S      A+A     D    
Sbjct: 131 LFARDKGGDEYYQGYRFDMETGRITGFTEPGTR-NGAPLWSDQGTLAAWARTHPGDPNND 189

Query: 240 YLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKD-EAMDIYSVDLQSNATERL 297
            ++    D A  R+       + P  +S +G + L+          ++ +D+ S    ++
Sbjct: 190 IIIGNPADPASVRVALEGEGAIGPVDWSDDGSKLLLQRYISIAESHLFILDVASGTLTQI 249

Query: 298 TNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-- 354
                +  S  +   D S +           L  +  +G+    I+   E  +    W  
Sbjct: 250 NADDTVAYSGGALLADGSVLTATDKDSEFTNLVRITPDGA---VINYTGEIEWGVSDWEL 306

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           SP G+ +AFT   G    I +++ +    R
Sbjct: 307 SPDGNTVAFTLNEGGLGTIHLLEIESGLVR 336



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/251 (11%), Positives = 63/251 (25%), Gaps = 54/251 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++     +    + D + L      T    A +++  F   +     S  G   L +  K
Sbjct: 80  WTGEGGMLITTRFGDTNQLH---EVTSPGGARRQLTFFDETVGNATVSPQGGTFLFARDK 136

Query: 279 DE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSN 334
                   Y  D+++      T     N +  +S   +   +     G     + +    
Sbjct: 137 GGDEYYQGYRFDMETGRITGFTEPGTRNGAPLWSDQGTLAAWARTHPGDPNNDIIIGNPA 196

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERL-------- 385
                R++ + E +     WS  G  +   ++    +  + ++                 
Sbjct: 197 DPASVRVALEGEGAIGPVDWSDDGSKLLLQRYISIAESHLFILDVASGTLTQINADDTVA 256

Query: 386 ------------LVEDSNLQAPT------------------------W--SPSGRSLIFS 407
                       L         T                        W  SP G ++ F+
Sbjct: 257 YSGGALLADGSVLTATDKDSEFTNLVRITPDGAVINYTGEIEWGVSDWELSPDGNTVAFT 316

Query: 408 RKKDGDTGSKL 418
             + G     L
Sbjct: 317 LNEGGLGTIHL 327



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 2/114 (1%)

Query: 332 QSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                  +R++  +   S+    W+ +G ++  T+F        V    G++ +L   D 
Sbjct: 57  DIPAEISERLTAYENVRSHAFLDWTGEGGMLITTRFGDTNQLHEVTSPGGARRQLTFFDE 116

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWV 443
            +   T SP G + +F+R K GD   + Y  D+  GR             P W 
Sbjct: 117 TVGNATVSPQGGTFLFARDKGGDEYYQGYRFDMETGRITGFTEPGTRNGAPLWS 170



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 47/130 (36%), Gaps = 5/130 (3%)

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           ERLT    +   A         +  + R G   QL+ + S G  +++++   E +  +  
Sbjct: 64  ERLTAYENVRSHAFLDWTGEGGMLITTRFGDTNQLHEVTSPGGARRQLTFFDE-TVGNAT 122

Query: 354 WSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKK 410
            SPQG    F +  G    +       +  +     E      AP WS  G    ++R  
Sbjct: 123 VSPQGGTFLFARDKGGDEYYQGYRFDMETGRITGFTEPGTRNGAPLWSDQGTLAAWARTH 182

Query: 411 DGDTGSKLYS 420
            GD  + +  
Sbjct: 183 PGDPNNDIII 192


>gi|254418871|ref|ZP_05032595.1| peptidase, S9A/B/C family, catalytic domain protein [Brevundimonas
           sp. BAL3]
 gi|196185048|gb|EDX80024.1| peptidase, S9A/B/C family, catalytic domain protein [Brevundimonas
           sp. BAL3]
          Length = 692

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 83/272 (30%), Gaps = 35/272 (12%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           ++E   +G + + + V   D  N           LF      N Q      +  +     
Sbjct: 171 MAERKTTGQVYDRMFVRHWDTWNDHTQNH-----LFVQSIGRNGQATGTPAWVTKGF--- 222

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--------- 290
                  D   K  G+    +  P     G   + S +     + +S +           
Sbjct: 223 -----DGDTPSKPFGDESDFVFTPA----GDSIVFSARLAGKTEPWSTNFDLWKTNGLTG 273

Query: 291 SNATERLT-NTLFINISASYSPDSSQIVFESD-REG----KEQLYVMQSNGSDQKRISQD 344
                 LT +    +    +SPD   + + +  R G    + Q+ +M      ++ I+ +
Sbjct: 274 DGTFTNLTQDNPAWDAGPVFSPDGRTLAYRAMARPGFEADRYQIVLMDVQSGQKREIASN 333

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + S     WS  G  +  T        +  +         +    ++ A   +PSG   
Sbjct: 334 WDRSADTLQWSRDGQTLYTTAGDVGSTRLFAVDTRNGVVTPVTGPGHVSAFQQTPSG--F 391

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           +F++     + S LY     GR      T A 
Sbjct: 392 VFAQD-SLKSPSDLYFKTYLGREMPRRLTQAN 422



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 68/192 (35%), Gaps = 6/192 (3%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            D   +  G+   F++R+   +E   +         +  DG     LT         P F
Sbjct: 235 SDFVFTPAGDSIVFSARLAGKTEPWSTNFDLWKTNGLTGDGT-FTNLTQDNPAWDAGPVF 293

Query: 220 SPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ + +AY          D  ++ LMD +  +  +   N+       ++S +G+    +
Sbjct: 294 SPDGRTLAYRAMARPGFEADRYQIVLMDVQSGQKREIASNWDRSADTLQWSRDGQTLYTT 353

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                +  +++VD ++     +T       +   +P       +S +   +  +      
Sbjct: 354 AGDVGSTRLFAVDTRNGVVTPVT-GPGHVSAFQQTPSGFVFAQDSLKSPSDLYFKTYLGR 412

Query: 336 SDQKRISQDKEA 347
              +R++Q   A
Sbjct: 413 EMPRRLTQANPA 424



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 96/295 (32%), Gaps = 76/295 (25%)

Query: 214 LFEPRFSPNQQKVAYATYD-----DEDILRVYLMDTRI-DRAPKRIGNFRSMILAPRFSS 267
           L +P+ SP+ + V Y+        +     ++++D    D AP+R+          R+  
Sbjct: 41  LGDPQVSPDGRYVVYSVTTTDVEANRRAGSLWMLDLNTPDVAPRRLAISDQGANTARWGG 100

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE------- 319
           +G        K  A  ++ V   +    ++TN   ++++A   SP   ++          
Sbjct: 101 DGN-LYFLSGKSGASQVWRVASPTATPVQVTNLP-LDVNAYRISPSGDKVAVSLAVYPDA 158

Query: 320 -------------SDREGKEQLY-------------------------VMQSNGSDQKRI 341
                        ++R+   Q+Y                                    +
Sbjct: 159 ADLNASVEMGKAMAERKTTGQVYDRMFVRHWDTWNDHTQNHLFVQSIGRNGQATGTPAWV 218

Query: 342 SQDKEASY--------FDPVWSPQGDLIAFTKFSGE-------KFAIGVMK---KDGSQE 383
           ++  +            D V++P GD I F+             F +        DG+  
Sbjct: 219 TKGFDGDTPSKPFGDESDFVFTPAGDSIVFSARLAGKTEPWSTNFDLWKTNGLTGDGTFT 278

Query: 384 RLLVEDSNLQA-PTWSPSGRSLIF-SRKKDGDTG--SKLYSIDLNGRNETLINTP 434
            L  ++    A P +SP GR+L + +  + G      ++  +D+    +  I + 
Sbjct: 279 NLTQDNPAWDAGPVFSPDGRTLAYRAMARPGFEADRYQIVLMDVQSGQKREIASN 333



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 82/254 (32%), Gaps = 74/254 (29%)

Query: 263 PRFSSNGKRALISVQKDE------AMDIYSVDLQSN--ATERLTNTLFINISASYSPDSS 314
           P+ S +G+  + SV   +      A  ++ +DL +   A  RL  +     +A +  D +
Sbjct: 44  PQVSPDGRYVVYSVTTTDVEANRRAGSLWMLDLNTPDVAPRRLAISDQGANTARWGGDGN 103

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------- 363
            + F S + G  Q++ + S  +   +++ +          SP GD +A            
Sbjct: 104 -LYFLSGKSGASQVWRVASPTATPVQVT-NLPLDVNAYRISPSGDKVAVSLAVYPDAADL 161

Query: 364 -----------------------------TKFSGEKFAIGVMKKD-----GSQERLLVED 389
                                        T     +  + V               + + 
Sbjct: 162 NASVEMGKAMAERKTTGQVYDRMFVRHWDTWNDHTQNHLFVQSIGRNGQATGTPAWVTKG 221

Query: 390 SNLQAPT----------WSPSGRSLIFSRKKDGD-----TGSKLYSID---LNGRNETLI 431
            +   P+          ++P+G S++FS +  G      T   L+  +    +G    L 
Sbjct: 222 FDGDTPSKPFGDESDFVFTPAGDSIVFSARLAGKTEPWSTNFDLWKTNGLTGDGTFTNLT 281

Query: 432 -NTPAYASDPQWVG 444
            + PA+ + P +  
Sbjct: 282 QDNPAWDAGPVFSP 295



 Score = 36.9 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 13/101 (12%)

Query: 347 ASYFDPVWSPQGDLIAFT---------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
               DP  SP G  + ++         + +G  + + +   D +  RL + D       W
Sbjct: 39  NRLGDPQVSPDGRYVVYSVTTTDVEANRRAGSLWMLDLNTPDVAPRRLAISDQGANTARW 98

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYA 437
              G  L F   K G   S+++ +         + N P   
Sbjct: 99  GGDGN-LYFLSGKSG--ASQVWRVASPTATPVQVTNLPLDV 136


>gi|158523126|ref|YP_001530996.1| WD40 domain-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511952|gb|ABW68919.1| WD40 domain protein beta propeller [Desulfococcus oleovorans Hxd3]
          Length = 544

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/273 (12%), Positives = 72/273 (26%), Gaps = 72/273 (26%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDE------DILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +     P  S + + VA+ +             ++++ DT          N+  +   
Sbjct: 105 GANNSSRNPAISGDGRYVAFDSQATNLTGQVTGDYQIFMRDTVAGTTQLISPNYGGVDTG 164

Query: 263 PR-------------FSSNGKRALISVQKD---------EAMDIYSVDLQSNATERLTNT 300
                           S +G+                   + D++  D Q+  T R+   
Sbjct: 165 APYGYGGGGRSGRPSVSFDGRYVAFYSDAANLTADSDTFGSQDVFIRDTQTGTTTRIMAY 224

Query: 301 LFIN-----ISASYSPDSSQIVFESD---------REGKE-QLYVMQSNGSDQKRI---- 341
                     S + S D   + F+SD          +G    ++V  +     + I    
Sbjct: 225 GGAQPDAGVTSPAISGDGLAVAFQSDATNLLAADNPDGSYVNIFVYDTASGVIEMISRAY 284

Query: 342 ----------SQDKEASYFDPVWSPQGDLIAFTKFS-------GEKFAIGVMKKDGSQER 384
                     +     +   P  S  G  +AF  ++            + V  +      
Sbjct: 285 GSAMAEFDDPTYGANGTCRRPSISYGGRYVAFESYATNLVDGGSTGNQVFVYDRTTGDMV 344

Query: 385 LLVE--------DSNLQAPTWSPSGRSLIFSRK 409
           +           +S  + P  S  GR + F   
Sbjct: 345 IASAVDGGTAWGNSTSETPAISSDGRYVAFRST 377



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 78/289 (26%), Gaps = 83/289 (28%)

Query: 220 SPNQQKVAYAT--------YDDEDILRVYLMDTRIDRAPKRIGNFRSM----ILAPRFSS 267
           S + + VA+ +         D      V++ DT+     + +    +     + +P  S 
Sbjct: 181 SFDGRYVAFYSDAANLTADSDTFGSQDVFIRDTQTGTTTRIMAYGGAQPDAGVTSPAISG 240

Query: 268 NGKRALISV---------QKDEAM-DIYSVDLQSNATERLTNTLFINIS----------- 306
           +G                  D +  +I+  D  S   E ++      ++           
Sbjct: 241 DGLAVAFQSDATNLLAADNPDGSYVNIFVYDTASGVIEMISRAYGSAMAEFDDPTYGANG 300

Query: 307 ----ASYSPDSSQIVFESDR-------EGKEQLYVMQSNGSDQKRISQDKEASYFD---- 351
                S S     + FES             Q++V      D    S     + +     
Sbjct: 301 TCRRPSISYGGRYVAFESYATNLVDGGSTGNQVFVYDRTTGDMVIASAVDGGTAWGNSTS 360

Query: 352 --PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN------------------ 391
             P  S  G  +AF   +            G+  R  VE+                    
Sbjct: 361 ETPAISSDGRYVAFRSTASNLVDFENAGVAGAYLRDTVENKTTLMSRRDNIVAGYDADAV 420

Query: 392 -----LQAPTWSPSGRSLIFSRKKD----GDTGSK------LYSIDLNG 425
                   P  S  G  + F   +D    GD  S+      LY  D +G
Sbjct: 421 YGAAMTYWPAVSAGGMYVTFGSDEDTLVAGDENSERDIFRVLYDTDGDG 469



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 57/216 (26%), Gaps = 53/216 (24%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE----- 323
           G+ A+  V  + +  + S+          T     +   S S D   I FES        
Sbjct: 23  GQNAVAGVVAEGSATLESLHTDG------TQGNDYSDMTSISADGRFIAFESSATTLVDT 76

Query: 324 ---GKEQLYVMQSNGSDQKRIS-----QDKEASYFDPVWSPQGDLIAFTKFS-------G 368
               +  + +  +       IS          S  +P  S  G  +AF   +        
Sbjct: 77  TTYAEYNILLRDTAEGVTTLISVTPAGYGANNSSRNPAISGDGRYVAFDSQATNLTGQVT 136

Query: 369 EKFAIGVMKKDGSQERLLVEDSN-----------------LQAPTWSPSGRSLIF----- 406
             + I +        +L+  +                     + ++   GR + F     
Sbjct: 137 GDYQIFMRDTVAGTTQLISPNYGGVDTGAPYGYGGGGRSGRPSVSF--DGRYVAFYSDAA 194

Query: 407 --SRKKDGDTGSKLYSIDL-NGRNETLINTPAYASD 439
             +   D      ++  D   G    ++       D
Sbjct: 195 NLTADSDTFGSQDVFIRDTQTGTTTRIMAYGGAQPD 230


>gi|124027402|ref|YP_001012722.1| putative peptidase [Hyperthermus butylicus DSM 5456]
 gi|123978096|gb|ABM80377.1| putative peptidase [Hyperthermus butylicus DSM 5456]
          Length = 665

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 52/315 (16%), Positives = 106/315 (33%), Gaps = 53/315 (16%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGK-----KFFSSPASWRKIAHT---ISDDIYQSITG 168
            + G+  L + F   D     ++I +         SP S R  A     + D+  + +  
Sbjct: 89  KQRGQPGLELRFASIDRPGASRLIARVHGLVSVSWSPDSLRLAAAIPVGLPDEDVKVVET 148

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPS-RDQILFEPRFSPNQQKV 226
               FN +       V          ++D   G          +   + +  +SP+ +K+
Sbjct: 149 LPVWFNGKGFIYKTQVKP-------FIVDVYSGYMEEIKLDDVKWMQVADIAWSPDGRKI 201

Query: 227 AYATYDD------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           A             D+   YL + R +   +++  F  ++    +S + +       + E
Sbjct: 202 AVTVSRVMEKPYLRDLYVYYLDEDRAELVAEKLSGFGEIV----WSPDSRYIAYLGHRRE 257

Query: 281 AM-----DIYSVDLQ--SNATERLT---NTLFINISAS------------YSPDSSQIVF 318
                   I   D +   +  E LT   +   +N + S            ++     I+F
Sbjct: 258 RGFATHNKILVFDTEDRGSEPECLTCSLDRNAVNTANSDVRFSSCLKKLQWTRKG--ILF 315

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +   G+  LY ++  GS+   +    E    +   +P G  IA+T+ +  +    V   
Sbjct: 316 VASDHGRAPLYSVEP-GSEPTIVIDPGEGVVDEFSATPDGARIAYTRMTATEPR-EVYVS 373

Query: 379 DGSQERLLVEDSNLQ 393
           DG   R L   ++  
Sbjct: 374 DGGNARRLTRHNDTW 388



 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 89/244 (36%), Gaps = 39/244 (15%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALIS 275
           P +  N +   Y T     I+ VY           ++ + + M +A   +S +G++  ++
Sbjct: 150 PVWF-NGKGFIYKTQVKPFIVDVY----SGYMEEIKLDDVKWMQVADIAWSPDGRKIAVT 204

Query: 276 VQK----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-----EGKE 326
           V +        D+Y   L  +  E +   L       +SPDS  I +   R         
Sbjct: 205 VSRVMEKPYLRDLYVYYLDEDRAELVAEKLSGFGEIVWSPDSRYIAYLGHRRERGFATHN 264

Query: 327 QLYVMQSN--GSDQKRISQDKEASYFDPV--------------WSPQGDLIAFTKFSGEK 370
           ++ V  +   GS+ + ++   + +  +                W+ +G  I F      +
Sbjct: 265 KILVFDTEDRGSEPECLTCSLDRNAVNTANSDVRFSSCLKKLQWTRKG--ILFVASDHGR 322

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWS--PSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             +  ++  GS+  ++++        +S  P G  + ++R    +   ++Y    +G N 
Sbjct: 323 APLYSVEP-GSEPTIVIDPGEGVVDEFSATPDGARIAYTRMTATEP-REVYV--SDGGNA 378

Query: 429 TLIN 432
             + 
Sbjct: 379 RRLT 382



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 75/221 (33%), Gaps = 21/221 (9%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           +I      V+       L V   D  +   L   +     E  +SP+ + +AY  +  E 
Sbjct: 200 KIAVTVSRVMEKPYLRDLYVYYLD-EDRAELVAEKLSGFGEIVWSPDSRYIAYLGHRRER 258

Query: 236 IL----RVYLMDTR-IDRAPKRIG------NFRSMILAPRFSS-------NGKRALISVQ 277
                 ++ + DT      P+ +          +     RFSS         K  L    
Sbjct: 259 GFATHNKILVFDTEDRGSEPECLTCSLDRNAVNTANSDVRFSSCLKKLQWTRKGILFVAS 318

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 +YSV+  S  T  +     +    S +PD ++I +      + +  V  S+G +
Sbjct: 319 DHGRAPLYSVEPGSEPTIVIDPGEGVVDEFSATPDGARIAYTRMTATEPR-EVYVSDGGN 377

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +R+++  +        S + +   F    G +    +++ 
Sbjct: 378 ARRLTRHNDTWLSRYKLS-KPEKFVFKASDGVEVEGWILRP 417



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 18/124 (14%)

Query: 338 QKRISQDKEAS---YFDPVWSPQGDLIAFT----KFSGEKFA--IGVMKKDGSQERLLVE 388
            + ++ +   +     +P  +P G  I +T        + +   I ++      E  L +
Sbjct: 3   ARVLTPETLRNIVLVSNPAITPDGGKILYTVARINIDADTYESSISLLDVATGFEEPLQQ 62

Query: 389 DSNLQAPTWSPSGRSLIFSRK------KDGDTGSKL--YSIDLNGRNETLINTPAYASDP 440
             +   P  +P+GR  +F R+      + G  G +L   SID  G +  +       S  
Sbjct: 63  GPSDSCPIPAPNGRHYVFIRRVERDRKQRGQPGLELRFASIDRPGASRLIARVHGLVSV- 121

Query: 441 QWVG 444
            W  
Sbjct: 122 SWSP 125


>gi|302685407|ref|XP_003032384.1| hypothetical protein SCHCODRAFT_55551 [Schizophyllum commune H4-8]
 gi|300106077|gb|EFI97481.1| hypothetical protein SCHCODRAFT_55551 [Schizophyllum commune H4-8]
          Length = 879

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 55/320 (17%), Positives = 101/320 (31%), Gaps = 36/320 (11%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASW------RKIAHTI--SDD----IYQSITG------- 168
            RLWD K  K+I G+                  A  +  +DD    I+++ T        
Sbjct: 291 LRLWDAKAGKEI-GESMEGHTRGVNSVVFSHDGARIVSGADDCTVRIWETATRQQLGDSI 349

Query: 169 EKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
              D+   +      + V SG    ++ V D  G    + +      +F   FSP+  ++
Sbjct: 350 RHNDWVRSVSISRGGKYVASGSDDGTVRVWDARGRKQVWASHGHTGWVFSVAFSPDSTRI 409

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
              +   +  +R++ + +         G+   +     FS +GK    S   D  + ++ 
Sbjct: 410 --VSGGRDATVRIWDVASGAQVGDDLRGHADDVNF-VAFSPDGKHVA-SSSSDRTIRVWD 465

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V      +           S + SPD   IV  SD +     Y     G          +
Sbjct: 466 VREAKKESGIPIGHTGKVYSVACSPDGKYIVSGSDDQTVRLCYA--QTGQLVGDPMTGHD 523

Query: 347 ASYFDPVWSPQGDLIAFTK---FSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSG 401
                  +SP    IA             + V   +      +++     A    +SP G
Sbjct: 524 DKVSCVTFSPDSTRIASASGYWLGHCDGTVRVWDAETRLSVRVLQGHYRGALCVAFSPDG 583

Query: 402 RSLIFSRKKDGDTGSKLYSI 421
             L+       D   +L+ +
Sbjct: 584 TRLV---SGSADKTLRLWDL 600



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 81/246 (32%), Gaps = 24/246 (9%)

Query: 183 SVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++ SG    ++ + D   G             +    FSP+   V  A+ D    LR++ 
Sbjct: 238 TIASGSWDFTVLLWDAKTGKQQGEALRGHTDCVRSVAFSPDGTTVVSASDDC--TLRLWD 295

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-- 299
                +      G+ R +  +  FS +G R +       A D      ++   ++L +  
Sbjct: 296 AKAGKEIGESMEGHTRGVN-SVVFSHDGARIV-----SGADDCTVRIWETATRQQLGDSI 349

Query: 300 -TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  S S S     +   SD +G  +++   + G  Q   S       F   +SP  
Sbjct: 350 RHNDWVRSVSISRGGKYVASGSD-DGTVRVW--DARGRKQVWASHGHTGWVFSVAFSPDS 406

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             I      G    + +       +    L     ++    +SP G+ +  S     D  
Sbjct: 407 TRIV---SGGRDATVRIWDVASGAQVGDDLRGHADDVNFVAFSPDGKHVASSSS---DRT 460

Query: 416 SKLYSI 421
            +++ +
Sbjct: 461 IRVWDV 466



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 72/191 (37%), Gaps = 13/191 (6%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +VSG    +L + D   G  I          +    FS +   +A  + D    +R++ 
Sbjct: 585 RLVSGSADKTLRLWDLATGQQIGEPLYGHKDYVQSVSFSSDGLYIASGSND--SSIRLWD 642

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTN 299
            ++R+ R     G+ +S+     FS +    L+S   D  + ++  D+++    R  LT 
Sbjct: 643 AESRLQRRGALEGHQKSVQSL-AFSPD-DLYLVSGSLDRTIRLW--DVKTGEQMRGPLTG 698

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQG 358
                 S S+SPD   +V  SD      + V       Q  +S     +    V +S  G
Sbjct: 699 HTDWVRSVSFSPDGKYVVSGSD---DRTVRVWSVQTRQQVGVSLRGHKNLVSSVTFSFDG 755

Query: 359 DLIAFTKFSGE 369
             I    F G 
Sbjct: 756 SHIVSGSFDGT 766



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 80/224 (35%), Gaps = 16/224 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    ++ V D +      +     +      FSP+  ++   + D    LR++ + T  
Sbjct: 547 GHCDGTVRVWDAETRLSVRVLQGHYRGALCVAFSPDGTRLVSGSAD--KTLRLWDLATG- 603

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFIN 304
            +  + +   +  + +  FSS+G     S   D ++ ++  D +S    R  L       
Sbjct: 604 QQIGEPLYGHKDYVQSVSFSSDGLYIA-SGSNDSSIRLW--DAESRLQRRGALEGHQKSV 660

Query: 305 ISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQGDLI 361
            S ++SPD   +V  S DR     + +      +Q R  ++   +       +SP G  +
Sbjct: 661 QSLAFSPDDLYLVSGSLDRT----IRLWDVKTGEQMRGPLTGHTDW-VRSVSFSPDGKYV 715

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                        V  +      L    + + + T+S  G  ++
Sbjct: 716 VSGSDDRTVRVWSVQTRQQVGVSLRGHKNLVSSVTFSFDGSHIV 759



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 101/298 (33%), Gaps = 58/298 (19%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWD+   +QI    +           H   D +      +   F+S  L+++    SG
Sbjct: 595 LRLWDLATGQQIGEPLY----------GHK--DYV------QSVSFSSDGLYIA----SG 632

Query: 188 IIKNSLCVMDRDGANIRY-LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +S+ + D +    R        + +    FSP+   +   + D      + L D + 
Sbjct: 633 SNDSSIRLWDAESRLQRRGALEGHQKSVQSLAFSPDDLYLVSGSLDR----TIRLWDVKT 688

Query: 247 DRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
               +  +      + +  FS +GK  ++S   D  + ++SV  +      L     +  
Sbjct: 689 GEQMRGPLTGHTDWVRSVSFSPDGKY-VVSGSDDRTVRVWSVQTRQQVGVSLRGHKNLVS 747

Query: 306 SASYSPDSSQIVFESDREGKEQLY----------VMQSNGSDQKR--------------I 341
           S ++S D S IV  S  +G  +++           + +   D  R              +
Sbjct: 748 SVTFSFDGSHIVSGSF-DGTIRVWDFGKLQSWENRVDAASGDTIRARVQASLQKNDDCWL 806

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTW 397
             D   +    +W P    +     +   F +  +       R+ + DS    + P++
Sbjct: 807 VYDDNGTERPILWIPH--HLRRIHRAYSPFHVKFVPPTMPHLRITLGDSFRLGEWPSY 862



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 63/202 (31%), Gaps = 23/202 (11%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            DI +    +         +      +L+  FS +G     S   D  + ++  D ++  
Sbjct: 201 GDIRKFVESELMSSTIGSAMRGHEDQVLSVTFSPDGSTIA-SGSWDFTVLLW--DAKTGK 257

Query: 294 TE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYF 350
            +   L        S ++SPD + +V  SD      L +  +    +   S +       
Sbjct: 258 QQGEALRGHTDCVRSVAFSPDGTTVVSASD---DCTLRLWDAKAGKEIGESMEGHTRGVN 314

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ----APTWSPSGRSLIF 406
             V+S  G  I  +        I     + +  + L +         + + S  G+ +  
Sbjct: 315 SVVFSHDGARIV-SGADDCTVRIW----ETATRQQLGDSIRHNDWVRSVSISRGGKYVA- 368

Query: 407 SRKKDGDTGSKLYSIDLNGRNE 428
                G     +   D  GR +
Sbjct: 369 ----SGSDDGTVRVWDARGRKQ 386


>gi|288802341|ref|ZP_06407781.1| prolyl oligopeptidase family protein [Prevotella melaninogenica
           D18]
 gi|288335308|gb|EFC73743.1| prolyl oligopeptidase family protein [Prevotella melaninogenica
           D18]
          Length = 707

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 51/358 (14%), Positives = 113/358 (31%), Gaps = 86/358 (24%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +D     +            ++  + ++ +    L  M+ DG N + LT S   I    R
Sbjct: 73  ADGKNDRLLTTSAKSEGDAAWLDNNTLAFLTGGQLWTMNVDGTNRKQLTHSDIDIEGF-R 131

Query: 219 FSPNQQK------VAYATYDDEDI---------------LRVYLMDTRIDRAPKRI---- 253
           FSP+ ++      + Y     ++                 R +    R +  P       
Sbjct: 132 FSPDCKRVVLIKSIPYYGTIKQNPSDLPKATGMVITDMNYRHWDHYVRTNAHPFVADVTA 191

Query: 254 -----------GNFRSMILAP-------RFSSNGKRALISVQKDEAM--------DIYSV 287
                      G      LAP        +S + K    + +K E          DIY  
Sbjct: 192 EGVGAGVDVLEGEPYESPLAPFGGIEQIDWSKDSKFIAYTCRKKEGTQYAISTDADIYIY 251

Query: 288 DLQSNATERL-------------TNTL--------------FINISASYSPDSSQIVFES 320
           ++++  T+ L             T ++                +++  +SPD   I ++S
Sbjct: 252 NVETRQTKNLCKPADYVEPKIDATKSMRNQAVNHQAGDMNVGYDVNPKFSPDGKYIAWQS 311

Query: 321 -----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                    + +L V +     +  +++  +++  D  WS     + F         +  
Sbjct: 312 MKNNGYESDRNRLCVYELATGKKTYVTESFDSNVDDYTWSLNSKDLYFIGVWHATVNVYQ 371

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
               G + + L E  N    + S  G   + + ++     +++++I    + +  + T
Sbjct: 372 TNLKG-EVKQLTE-GNHNYVSISLLGDKKLLAIRQSISQANEIFAITPAKKEKASVQT 427



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 80/242 (33%), Gaps = 64/242 (26%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I A + S +GK+ +  V      +      +  +D        LT +      A++  
Sbjct: 36  GRIGAAQASPDGKKVVYQVGYYSVKENKGHQVLRVMDADGKNDRLLTTSAKSEGDAAWL- 94

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--------- 362
           D++ + F +      QL+ M  +G+++K+++   +       +SP    +          
Sbjct: 95  DNNTLAFLT----GGQLWTMNVDGTNRKQLTH-SDIDIEGFRFSPDCKRVVLIKSIPYYG 149

Query: 363 ---------------------------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                                      + + +   F   V  +       ++E    ++P
Sbjct: 150 TIKQNPSDLPKATGMVITDMNYRHWDHYVRTNAHPFVADVTAEGVGAGVDVLEGEPYESP 209

Query: 396 ----------TWSPSGRSLIFS-RKKDGD-----TGSKLYSIDLNGRNETLINTPAYASD 439
                      WS   + + ++ RKK+G      T + +Y  ++  R    +  PA   +
Sbjct: 210 LAPFGGIEQIDWSKDSKFIAYTCRKKEGTQYAISTDADIYIYNVETRQTKNLCKPADYVE 269

Query: 440 PQ 441
           P+
Sbjct: 270 PK 271



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 52/307 (16%), Positives = 94/307 (30%), Gaps = 57/307 (18%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SV        L VMD DG N R LT S      +  +  +   +A+ T       +++ 
Sbjct: 57  YSVKENKGHQVLRVMDADGKNDRLLTTSAKS-EGDAAW-LDNNTLAFLT-----GGQLWT 109

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLT- 298
           M+       K++ +    I   RFS + KR ++  S+     +     DL       +T 
Sbjct: 110 MNVD-GTNRKQLTHSDIDIEGFRFSPDCKRVVLIKSIPYYGTIKQNPSDLPKATGMVITD 168

Query: 299 -NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            N    +    Y   ++   F +D   +     +     +                WS  
Sbjct: 169 MNYRHWD---HYVRTNAHP-FVADVTAEGVGAGVDVLEGEPYESPLAPFGGIEQIDWSKD 224

Query: 358 GDLIAFT--KFSGEKF------AIGVMKKDGSQERLLVED-------------------- 389
              IA+T  K  G ++       I +   +  Q + L +                     
Sbjct: 225 SKFIAYTCRKKEGTQYAISTDADIYIYNVETRQTKNLCKPADYVEPKIDATKSMRNQAVN 284

Query: 390 --------SNLQAPTWSPSGRSLIFSRKKDGDTGS---KLYSIDLNGRNETLINT--PAY 436
                        P +SP G+ + +   K+    S   +L   +L    +T +     + 
Sbjct: 285 HQAGDMNVGYDVNPKFSPDGKYIAWQSMKNNGYESDRNRLCVYELATGKKTYVTESFDSN 344

Query: 437 ASDPQWV 443
             D  W 
Sbjct: 345 VDDYTWS 351



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 81/247 (32%), Gaps = 39/247 (15%)

Query: 212 QILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                P+FSP+ + +A+ +  +     D  R+ + +    +      +F S +    +S 
Sbjct: 293 GYDVNPKFSPDGKYIAWQSMKNNGYESDRNRLCVYELATGKKTYVTESFDSNVDDYTWSL 352

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           N K           +++Y  +L+    ++LT      +S S   D   +          +
Sbjct: 353 NSKDLYFIGVWHATVNVYQTNLK-GEVKQLTEGNHNYVSISLLGDKKLLAIRQSISQANE 411

Query: 328 LYVMQSNGSD----QKRISQDKEASY-------FDPVW--SPQGDLIAFTKFSGEKFAIG 374
           ++ +     +    Q ++S + +  Y           W  +  G  +     +   F   
Sbjct: 412 IFAITPAKKEKASVQTQLSFENKYIYDQLALGDVKSRWVKTTDGKEMMEWVITPPHF--- 468

Query: 375 VMKKDGSQERLLVEDSNLQAPT---WS---------PSGRSLIFSRKKD----GDTGSKL 418
               +     LL  +   Q+P    WS          +G  +I   ++     G   ++ 
Sbjct: 469 --DPNKKYPTLLFCEGGPQSPVSQFWSYRWNFQIMAANGYVIIAPNRRGLPGFGSAWNEE 526

Query: 419 YSIDLNG 425
            S D  G
Sbjct: 527 VSTDWTG 533


>gi|206889573|ref|YP_002249100.1| hypothetical protein THEYE_A1286 [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206741511|gb|ACI20568.1| conserved hypothetical protein [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 417

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 70/207 (33%), Gaps = 26/207 (12%)

Query: 218 RFSP---NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            + P   ++  +       +         T  D+   ++ N        R S++ K+   
Sbjct: 229 AWEPLFVDENHICVPVKTQKGFTLAMNGKTIWDKYFVQLWNQ-------RVSTDKKKIAA 281

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            V  D      +VD         T +  + +   +SPD  ++     RE  +  + +  +
Sbjct: 282 VVATDFGKWTIAVD---GIPWNRTFSQAV-LPPQFSPDGKKVAAVV-RENNQ--WTVAVD 334

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G   KR         + P +SP    I         + I +   DG   +   +   L  
Sbjct: 335 GIPWKR----GFERVWSPQFSPDSSHIITKAEKEGVYFIVL---DGEIGKDTFD--ILWE 385

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           P +SP G  ++    K+G    K+ +I
Sbjct: 386 PQFSPDGEKILVRCIKNGRYYRKILTI 412



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 19/170 (11%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N + +       L+  R S +++K+A     D     + +     +R       F   +L
Sbjct: 255 NGKTIWDKYFVQLWNQRVSTDKKKIAAVVATDFGKWTIAVDGIPWNR------TFSQAVL 308

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            P+FS +GK+    V+++   + ++V +     +R         S  +SPDSS I+ +++
Sbjct: 309 PPQFSPDGKKVAAVVREN---NQWTVAVDGIPWKR---GFERVWSPQFSPDSSHIITKAE 362

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +EG   +Y +  +G     I +D     ++P +SP G+ I        ++
Sbjct: 363 KEG---VYFIVLDGE----IGKDTFDILWEPQFSPDGEKILVRCIKNGRY 405


>gi|325860299|ref|ZP_08173421.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           denticola CRIS 18C-A]
 gi|325482178|gb|EGC85189.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           denticola CRIS 18C-A]
          Length = 744

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 114/404 (28%), Gaps = 107/404 (26%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              L D    ++   K+ FS     R      SD++ + +   +  +  R + + ++   
Sbjct: 66  SCSLVDPVSGRE---KRLFSLDELNRWAGLEKSDEVVRHLYAAEFPYADRPVVLVQNGRE 122

Query: 187 G----------------------------------IIKNSLCVMDRDGANIRYLTPSRDQ 212
                                              +  N L V D  G   +  T     
Sbjct: 123 DLYVNFKTHRLEQRSDRPAGLQAHLWNSQSGATAYVADNQLFVTDAKGQKRQLTTDGSRN 182

Query: 213 ILFEPR-------------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           I++                +SP   ++A+   D   +    L+D          G  R+ 
Sbjct: 183 IVYGQSVHRDEFGISGGLYWSPKGNRLAFYRMDQSMVADYPLVDIPELDWKPEKGESRAA 242

Query: 260 ILAP-----------------------------------------RFSSNGKRAL-ISVQ 277
             AP                                          +S + K      V 
Sbjct: 243 KAAPIKYPMAGETSHKVTVGVYDLTTGKTVYLQAGDPTDRYFTNIAWSPDEKTVYMFEVN 302

Query: 278 KDEAM-DIYSVDLQSN----ATERLTNTLFINISA----SYSP-DSSQIVFESDREGKEQ 327
           +D+    + S D  +        R T+  +  +       + P + ++ V +S ++G   
Sbjct: 303 RDQNDCRLVSYDAVTGAKLKELYRETDAKY--VEPCHPIQFLPWNENEFVLQSQKDGYNH 360

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERL 385
           LY+   +G   ++I+  K        ++ +   I +     +  +    ++     +  L
Sbjct: 361 LYLFNKDGRLIRQITSGKWVVMDILGFNAKQKGIIYVSNECNPIQRNAWLVNVATGKRTL 420

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           L        P  S  G  L+     + D   K   + LNGR + 
Sbjct: 421 LDNGRGCHYPKLSKDGSVLM-DSYSEPDVPHKYEVVTLNGRPQR 463


>gi|302695713|ref|XP_003037535.1| hypothetical protein SCHCODRAFT_47625 [Schizophyllum commune H4-8]
 gi|300111232|gb|EFJ02633.1| hypothetical protein SCHCODRAFT_47625 [Schizophyllum commune H4-8]
          Length = 361

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 87/240 (36%), Gaps = 37/240 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              RY+     + +   +FSP+ + +A    D      + + D  I      +      I
Sbjct: 42  YTTRYILTGHARSISAVKFSPDGKLLASCAADK----TIKIWDPEIGEIVHTLKGHEEGI 97

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S++G+    S   D+ + I+SV   +   +RL          +Y+P  + IV   
Sbjct: 98  SDIAWSNDGQYIA-SASDDKTVRIWSV-ADAKEVKRLIGHTNFVFCVAYNPAGNLIV--- 152

Query: 321 DREG-KEQLYVMQSNGSDQKRISQDKEASY-----------------FDPVWSPQGDLIA 362
              G  E + +  ++  +  R+   +EA                       +S  G +I 
Sbjct: 153 -SGGFDETIRIWDASKGEYGRLCTCREADDLYAGKFVRFMPAHSDPVTSVGFSHDGTMIV 211

Query: 363 FTKFSGEKFAIGVMKKDGSQ-ERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                G    I +   +  Q  + LV+D N       ++P+ + ++ S +   D+  +L+
Sbjct: 212 SCAMDG---LIRIWDTESGQCLKTLVDDDNPICSHVRFTPNSKFVLASTQ---DSTVRLW 265


>gi|323975244|gb|EGB70348.1| hypothetical protein ERFG_03946 [Escherichia coli TW10509]
          Length = 416

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 56/160 (35%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I  +     +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACVDAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I  VD QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACVDAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I  V     
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACVDAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 403


>gi|86143858|ref|ZP_01062226.1| dipeptidyl aminopeptidase IV [Leeuwenhoekiella blandensis MED217]
 gi|85829565|gb|EAQ48028.1| dipeptidyl aminopeptidase IV [Leeuwenhoekiella blandensis MED217]
          Length = 723

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 49/318 (15%), Positives = 118/318 (37%), Gaps = 57/318 (17%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA---T 230
           +     +S  + S   ++SL V        + L    ++ + EP FSP+  KVAY     
Sbjct: 100 DESKALLSTKMRSIYRRSSLGVYYVYDLETKELVQVAEEAIQEPTFSPDASKVAYGLDNN 159

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNF---------RSMILAPRFSSNGKRALISVQKDEA 281
              +D+          D A  ++ N           + + A  ++++G +       +  
Sbjct: 160 IYIKDLASGTTTQVTTDGAKNKVINGITDWVYEEEFAFVRAFDWNADGDKIAYIRFDESE 219

Query: 282 MDIYSVDLQSNATER-----------------------LT--NTLFINISAS-------- 308
           +  +S+D+  N                           +T  +T  +++S          
Sbjct: 220 VPEFSMDVFGNELYPSKDTFKYPKAGETNATVSLHIYDVTSADTKAVDLSGFQNYYIPRL 279

Query: 309 -YSPDSSQIVFESDREGKEQLYVMQSNG--SDQKRISQDKEASY----FDPVWSPQGDLI 361
            ++P+++ +  ++    +  + ++  +G   + K I  DK+ +Y     +  +    D I
Sbjct: 280 EWTPEANVLAVQTTNRKQNDVNLLFVDGTSGEAKLILSDKDDAYVDITNNLTFLEDNDFI 339

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS---PSGRSLIFSRKKDGDTGSKL 418
            +T        I +  KDG  +  + +    +  ++    P  + + +   ++G     +
Sbjct: 340 -WTSEKDGWNHIYLYDKDGKLKNQVTQGP-WEVTSYYGYDPKSKRVFYQSSENGSINRGV 397

Query: 419 YSIDLNGRNETLINTPAY 436
           YS+ +NG+++  + T A 
Sbjct: 398 YSVKVNGKSKKALATEAG 415



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/227 (11%), Positives = 79/227 (34%), Gaps = 27/227 (11%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            + DG  I Y+     ++   P FS +    ++ Y + D     +    +  +      +
Sbjct: 203 WNADGDKIAYIRFDESEV---PEFSMDVFGNEL-YPSKDTFKYPKAGETNATVSLHIYDV 258

Query: 254 GNFRSMILA---------PR--FSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTNT 300
            +  +  +          PR  ++       +     +  D+    VD  S   + + + 
Sbjct: 259 TSADTKAVDLSGFQNYYIPRLEWTPEANVLAVQTTNRKQNDVNLLFVDGTSGEAKLILSD 318

Query: 301 LF-----INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                  I  + ++  D+   ++ S+++G   +Y+   +G  + +++Q          + 
Sbjct: 319 KDDAYVDITNNLTFLEDND-FIWTSEKDGWNHIYLYDKDGKLKNQVTQGPWEVTSYYGYD 377

Query: 356 PQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           P+   + +           +  +K +G  ++ L  ++   +  +S  
Sbjct: 378 PKSKRVFYQSSENGSINRGVYSVKVNGKSKKALATEAGTNSANFSTD 424


>gi|116051616|ref|YP_789545.1| hypothetical protein PA14_17510 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|313108977|ref|ZP_07794952.1| putative TolB-like translocation protein [Pseudomonas aeruginosa
           39016]
 gi|115586837|gb|ABJ12852.1| putative TolB-like translocation protein [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|310881454|gb|EFQ40048.1| putative TolB-like translocation protein [Pseudomonas aeruginosa
           39016]
          Length = 335

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 68/182 (37%), Gaps = 18/182 (9%)

Query: 269 GKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESD 321
           G R +        D + ++Y  D +S +T +L N    NI     A +SPD   + F   
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQL-NQPGWNIEDPMNAHFSPDGRYLTFMGR 103

Query: 322 REGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           + G   ++     G+     ++        DP +S  G  +        + A  V   DG
Sbjct: 104 QNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQVVLKHEGDIRLATLVFNGDG 163

Query: 381 SQER-----LLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           S        +  +  + +   P  +PSG+ ++++         ++   +L     + + T
Sbjct: 164 SVGVSAWKAVTSDGWSTEESMPFLTPSGKYVVYAT--GAGDSLRVVRRNLENGQVSPLAT 221

Query: 434 PA 435
           PA
Sbjct: 222 PA 223



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 14/188 (7%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQK 278
             ++ Y +Y +       L          R  N     +       FS +G+      ++
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIEDPMNAHFSPDGRYLTFMGRQ 104

Query: 279 DEAMDIYSVDLQSNA-TERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNG- 335
           + A  +++  +        LT      N    +S D  Q+V + + + +    V   +G 
Sbjct: 105 NGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQVVLKHEGDIRLATLVFNGDGS 164

Query: 336 ---SDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--- 388
              S  K ++ D  ++    P  +P G  + +   +G+   +     +  Q   L     
Sbjct: 165 VGVSAWKAVTSDGWSTEESMPFLTPSGKYVVYATGAGDSLRVVRRNLENGQVSPLATPAA 224

Query: 389 DSNLQAPT 396
                 P 
Sbjct: 225 GGRDYYPV 232



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 78/278 (28%), Gaps = 15/278 (5%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH                     L     +  G   ++L + D    + R L      I 
Sbjct: 25  AHAACTANLALQPASSLPALGGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIE 84

Query: 215 --FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKR 271
                 FSP+ + + +          V+       +AP  +          P+FS +G++
Sbjct: 85  DPMNAHFSPDGRYLTFMG-RQNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQ 143

Query: 272 ALISVQKDEAMDIYSVDLQS----NATERLTNTLF--INISASYSPDSSQIVFESDREGK 325
            ++  + D  +     +       +A + +T+  +         +P    +V+ +     
Sbjct: 144 VVLKHEGDIRLATLVFNGDGSVGVSAWKAVTSDGWSTEESMPFLTPSGKYVVYATGAGDS 203

Query: 326 EQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---KKDGS 381
            ++            + +       + PV                   + ++      G+
Sbjct: 204 LRVVRRNLENGQVSPLATPAAGGRDYYPVVRDYTAYFLSRTQPAGNDQLAMVVPNSPPGT 263

Query: 382 QERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKL 418
              L +          +P +   LIFS      T S L
Sbjct: 264 PAILPLNHCQGDNSDAAPVNEDYLIFSSTSFDPTYSLL 301


>gi|194772266|ref|XP_001967742.1| GF13988 [Drosophila ananassae]
 gi|190631431|gb|EDV44848.1| GF13988 [Drosophila ananassae]
          Length = 579

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 84/224 (37%), Gaps = 17/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             I  LT SR  +    +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 281 WRIHQLTNSRSPVSAV-KFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 335

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + ++ +     + + L          +++P S+ IV  S
Sbjct: 336 SDVAWSSD-SRLLVSGSDDKTLKVWELS-TGKSLKTLKGHSNYVFCCNFNPQSNLIVSGS 393

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 394 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 448

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 449 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 489



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 104/307 (33%), Gaps = 23/307 (7%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLW-DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            L T R ++       V   L  +    +++I +   +     R     +      ++  
Sbjct: 151 ALETVRTLEITDANYDVALDLLRNRFSNRRLIFQAHINEILQLR----VVEPGSVATLRE 206

Query: 169 EKGDFNSRI-LFVSESVVSGIIKNSLCVMDRDGANIRYLTPS--RDQILFEPRFSPNQQK 225
               FN  + + ++ + + G +   +     D A       S         P +    + 
Sbjct: 207 LSDRFNGHMRVLMTSAEIQGCLFIQIIFQKLDPATKAKWEDSLAGSTDDSLPSW----ES 262

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A        + +      RI     ++ N RS + A +FS NG+    S   D+ + I+
Sbjct: 263 MARFLEQSAGLSKALTFLWRIH----QLTNSRSPVSAVKFSPNGEWLA-SSSADKLIKIW 317

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                    + ++         ++S DS  +V  SD    + L V + +     +  +  
Sbjct: 318 GA-YDGKFEKTISGHKLGISDVAWSSDSRLLVSGSD---DKTLKVWELSTGKSLKTLKGH 373

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
               F   ++PQ +LI    F  E   I  ++     + L      + A  ++  G  ++
Sbjct: 374 SNYVFCCNFNPQSNLIVSGSFD-ESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIV 432

Query: 406 FSRKKDG 412
            S   DG
Sbjct: 433 -SSSYDG 438


>gi|325924297|ref|ZP_08185842.1| dipeptidyl-peptidase IV [Xanthomonas gardneri ATCC 19865]
 gi|325545222|gb|EGD16531.1| dipeptidyl-peptidase IV [Xanthomonas gardneri ATCC 19865]
          Length = 742

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 87/279 (31%), Gaps = 69/279 (24%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+   + +        L +Y +      A +++ +        + S  G       ++
Sbjct: 116 WAPDAHALLFP---LGGELYLYDLRKTGAAAVRKLTHGGGFATDAKLSPKGGFVSFVRER 172

Query: 279 DEAMDIYSVDLQSNATERLTNTLFI-----------------NISASYSPDSSQIVFES- 320
           +    ++ +DL S    +LT                      +    ++PD S I F   
Sbjct: 173 N----LWVIDLASGKQLQLTRDGSETIGNGVAEFVADEEMDRHTGYWWAPDDSAIAFARI 228

Query: 321 DREGKE-----------------------------QLYVMQSNGSDQKR---ISQDKEAS 348
           D  G                               QL V+    S   R   +  + +  
Sbjct: 229 DESGVPVQKRPEVYADHTEVIEQRYPQAGQPNVVVQLGVIAPRASATPRWVDLGNNPDIY 288

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMK---KDGSQERLLVEDSNLQAP-----TWSPS 400
                W      + F + S ++  + +++     G Q  L+ E S    P      +   
Sbjct: 289 LARVDW-RDAQRLTFQRQSRDQKTLELIETTLASGKQRVLITETSPTWVPLNNDLRFLKD 347

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           GR + ++ ++ G     LY    +GR  T + + A+  D
Sbjct: 348 GRFV-WNSERSG--YEHLYVASEDGRTLTPLTSGAWVVD 383



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 50/327 (15%), Positives = 97/327 (29%), Gaps = 66/327 (20%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQI------ 213
              + +T   G      L      VS + + +L V+D   G  ++      + I      
Sbjct: 142 AAVRKLTHGGGFATDAKLSPKGGFVSFVRERNLWVIDLASGKQLQLTRDGSETIGNGVAE 201

Query: 214 ---------LFEPRFSPNQQKVAYATYDDEDIL-----RVYLMDTRIDRAPKRIGNFRSM 259
                         ++P+   +A+A  D+  +       VY   T +           ++
Sbjct: 202 FVADEEMDRHTGYWWAPDDSAIAFARIDESGVPVQKRPEVYADHTEVIEQRYPQAGQPNV 261

Query: 260 I-----LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF------------ 302
           +     +APR S+  +            DIY   +     +RLT                
Sbjct: 262 VVQLGVIAPRASATPRWV----DLGNNPDIYLARVDWRDAQRLTFQRQSRDQKTLELIET 317

Query: 303 -----------INISASYSP---------DSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                         S ++ P         D  + V+ S+R G E LYV   +G     ++
Sbjct: 318 TLASGKQRVLITETSPTWVPLNNDLRFLKDG-RFVWNSERSGYEHLYVASEDGRTLTPLT 376

Query: 343 QDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                         Q   + F  +K S  +  I  +   G       + +   A +++ +
Sbjct: 377 SGAWVVDALLAVDEQAGTVYFSASKESPTQAHIYAVPLAGGAIEKRSKTNGTHAASFAGN 436

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             S+      +  T  ++     NG  
Sbjct: 437 -ASVYVDSWSNTATPPQIELFRANGEK 462



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 68/210 (32%), Gaps = 55/210 (26%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-------------------- 246
            P     L +P+ +P+  +V +    D D  ++ L +  I                    
Sbjct: 32  LPLSGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWEYDIASGQTRLLVDSKVVLPGTEV 91

Query: 247 -------DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ER 296
                   R  +RI  F  ++   +++ +    L  +      ++Y  DL+        +
Sbjct: 92  LSDVEKARRERQRIAAFAGIVDY-QWAPDAHALLFPL----GGELYLYDLRKTGAAAVRK 146

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--- 353
           LT+       A  SP    + F  +R     L+V+      Q ++++D   +  + V   
Sbjct: 147 LTHGGGFATDAKLSPKGGFVSFVRER----NLWVIDLASGKQLQLTRDGSETIGNGVAEF 202

Query: 354 -------------WSPQGDLIAFTKFSGEK 370
                        W+P    IAF +     
Sbjct: 203 VADEEMDRHTGYWWAPDDSAIAFARIDESG 232


>gi|269837386|ref|YP_003319614.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Sphaerobacter thermophilus DSM 20745]
 gi|269786649|gb|ACZ38792.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphaerobacter thermophilus DSM 20745]
          Length = 652

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 66/220 (30%), Gaps = 23/220 (10%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR------ 238
             G + N L  +  DG+    +          PR SP+  ++ + T+D   +        
Sbjct: 146 PDGQVHNRLVALPADGSAEPRIIAEGHDFYSFPRVSPDGTRLVWTTWDHPRMPWDGTDLW 205

Query: 239 --VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
                 D  +       G     I  P +S +G   LIS  +    ++Y+  L       
Sbjct: 206 IATLNQDGTLSDVRHLAGGTEESIFQPAWSPDGTLHLIS-DRTGWWNLYA--LHGGELTP 262

Query: 297 LTNTLFINISASYS---------PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           L           +          PD  +I     ++G   L ++       + +     A
Sbjct: 263 LAPMDAEFGVPQWVFGLSTYDFLPDG-RIACLYSQQGLTHLGLITPGSGRVEPVETSFTA 321

Query: 348 SYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKDGSQERLL 386
             +    +P G+ +      +    ++  +        ++
Sbjct: 322 FRYIHA-APSGEQVWVIAASAAHPASVASIDLQTGHATVV 360



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 69/196 (35%), Gaps = 28/196 (14%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS-----PDSSQIVFES--- 320
           G     +   D+   +Y  D        +T       S  Y+     PD   I+      
Sbjct: 88  GDTVFFANFADQR--LYRQDP-GEEPRPITPEPPAPRSLRYADGCVTPDGRLIICVQEEH 144

Query: 321 --DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-------GEKF 371
             D +   +L  + ++GS + RI  +    Y  P  SP G  + +T +        G   
Sbjct: 145 APDGQVHNRLVALPADGSAEPRIIAEGHDFYSFPRVSPDGTRLVWTTWDHPRMPWDGTDL 204

Query: 372 AIGVMKKDG--SQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            I  + +DG  S  R L   +  ++  P WSP G  L     + G     LY++   G  
Sbjct: 205 WIATLNQDGTLSDVRHLAGGTEESIFQPAWSPDGT-LHLISDRTG--WWNLYALHG-GEL 260

Query: 428 ETLINTPAYASDPQWV 443
             L    A    PQWV
Sbjct: 261 TPLAPMDAEFGVPQWV 276



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 68/196 (34%), Gaps = 28/196 (14%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+  L+    D ++    V  Q      L +       A +      + F +  +  ++L
Sbjct: 49  GRSVLVKRTTDGSVT--DVTPQGFNVRTLVHEYG--GGALWL-HGDTVFFANFAD--QRL 101

Query: 329 YVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFT---KFSGEKFAIGVM--KKD 379
           Y     G + + I+ +  A     Y D   +P G LI           +    ++    D
Sbjct: 102 YRQDP-GEEPRPITPEPPAPRSLRYADGCVTPDGRLIICVQEEHAPDGQVHNRLVALPAD 160

Query: 380 GS-QERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDT---GSKLYSIDL--NGRNETLIN 432
           GS + R++ E  +  + P  SP G  L+++          G+ L+   L  +G    + +
Sbjct: 161 GSAEPRIIAEGHDFYSFPRVSPDGTRLVWTTWDHPRMPWDGTDLWIATLNQDGTLSDVRH 220

Query: 433 TPAYASD----PQWVG 444
                 +    P W  
Sbjct: 221 LAGGTEESIFQPAWSP 236


>gi|326333925|ref|ZP_08200156.1| putative vegetative incompatibility protein HET-E-1
           [Nocardioidaceae bacterium Broad-1]
 gi|325948286|gb|EGD40395.1| putative vegetative incompatibility protein HET-E-1
           [Nocardioidaceae bacterium Broad-1]
          Length = 351

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 72/199 (36%), Gaps = 19/199 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + VA A    E  L V+ ++   + A   +GN    I    FS +G +  ++  
Sbjct: 147 AFSPDGELVAGA--GLEGDLIVWSVEDGDEVASADLGNGIGSI---SFSPDGTQLAVA-S 200

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D    +  ++ +S      T          +SPD   I   S    +    V  +   +
Sbjct: 201 GDG---VAILEAESGDEVD-TLAAARGADPIWSPDGRWI---SGVTSEGYPTVWDATTFE 253

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQERLLVEDSNLQ 393
                  + A+     +SP    +A T   G+     +A   +   G    +    +   
Sbjct: 254 AVETLPGQPAT--AVAFSPDSRSLAVTADPGDVRLMLWAPAALGGSGGSREIAQAPAMTS 311

Query: 394 APTWSPSGRSLIFSRKKDG 412
              +SP G++L  +  ++G
Sbjct: 312 KVIFSPDGKTLYTASAREG 330



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 81/256 (31%), Gaps = 34/256 (13%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           DRDG +I  L  + D I      +P   ++   +       +  +             N 
Sbjct: 29  DRDGCDISALGTADDSISLAAAVAP--SRLVAGSLTAGADGKYVVASCTDGTCR---WNA 83

Query: 257 RSMILAP-------RFSSNGKRALISVQKDEAMDIYSVDLQSNATER----LTNTLFINI 305
                 P         S +     +  +K    DI  V++ S+   +    L N    + 
Sbjct: 84  GGGAYEPISETGYGAISPD---LTLVARKVGCSDIALVEVDSDEEVQRLEGLPNPKVTDA 140

Query: 306 SA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           S     ++SPD   +       G E   ++ S     +  S D         +SP G  +
Sbjct: 141 SPVGEIAFSPDGELVA----GAGLEGDLIVWSVEDGDEVASADLGNGIGSISFSPDGTQL 196

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A     G    + +++ +   E   +  +    P WSP GR +        +    ++  
Sbjct: 197 AVASGDG----VAILEAESGDEVDTLAAARGADPIWSPDGRWI---SGVTSEGYPTVWDA 249

Query: 422 DLNGRNETLINTPAYA 437
                 ETL   PA A
Sbjct: 250 TTFEAVETLPGQPATA 265


>gi|320101597|ref|YP_004177188.1| hypothetical protein Isop_0042 [Isosphaera pallida ATCC 43644]
 gi|319748879|gb|ADV60639.1| protein of unknown function DUF1549 [Isosphaera pallida ATCC 43644]
          Length = 1744

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 38/294 (12%), Positives = 89/294 (30%), Gaps = 22/294 (7%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
            +     + A    D  +  I        +         ++    +   +M  DG+    
Sbjct: 139 GARDDTPESAKRTYDAEHPPIYNRPPVVAALDFSPDGRFLAVGGFHETLLMSADGSQRLA 198

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +   +FSP+ +++A +      +  + + +    +    +      +    +
Sbjct: 199 RLIGVSERIESVKFSPDGKRLAVSGGLPARMGEIQVWNVETGKLLLSVPVTYDTVYGVNW 258

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLT-----NTLFINISASYSPDSSQIVFES 320
           S +G             D     + S   +++      N   ++    ++ D S++V  S
Sbjct: 259 SPDGTLISF-----GCADNTVRAIDSRTGKQVVYMGSHNDWALDT--VFTKDGSRLVSVS 311

Query: 321 -DREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSG--EKFAI--- 373
            D   K      Q    +   I+    +         P+ D I      G    + I   
Sbjct: 312 RDMTAKLTEVATQRFIDNLTSITPGALKGGLAAVARHPERDEIVVGGSDGKPRVYRIDRL 371

Query: 374 --GVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              V+  D +  R L   +  +     SP G+ +      DG     ++S + +
Sbjct: 372 TARVIGDDSNLIRQLPGVNGRINDVAVSPDGKRIAVVGGLDGQGELVIHSYEFD 425


>gi|291569779|dbj|BAI92051.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 729

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 72/223 (32%), Gaps = 16/223 (7%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VS     +L + +     +          +     SP+ ++    +YD+     + + D
Sbjct: 168 GVSASGDTTLKLWNLKTGRVVRSLQGHTCRVLALAISPSGKRAISGSYDN----TLKMWD 223

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
            R     +        + A   + +GKR  +S  KD  + ++  DL +    R  T    
Sbjct: 224 LRTGEELRTFAGHGDWVTAVAMTPDGKR-ALSGSKDTTLRLW--DLVTGEEIRTFTGHGD 280

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +  + + +PD  + +  S     + L +      ++ R     E S +    +P G    
Sbjct: 281 LVAAVAITPDGKRALSASF---DKTLKLWDLQTGEELRTFAGHEGSVWALAITPNGKRAL 337

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRS 403
              F      +        +E         ++ A   +P G  
Sbjct: 338 SGSFDQT---LKFWDLQTGEELRTFAGHEDSVNAVAITPDGER 377



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 71/227 (31%), Gaps = 20/227 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +  +SG   N+L + D                +     +P+ ++             + L
Sbjct: 208 KRAISGSYDNTLKMWDLRTGEELRTFAGHGDWVTAVAMTPDGKR----ALSGSKDTTLRL 263

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            D       +       ++ A   + +GKR  +S   D+ + ++  DLQ+    R     
Sbjct: 264 WDLVTGEEIRTFTGHGDLVAAVAITPDGKR-ALSASFDKTLKLW--DLQTGEELRTFAGH 320

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                + + +P+  + +  S     + L        ++ R     E S      +P G+ 
Sbjct: 321 EGSVWALAITPNGKRALSGSF---DQTLKFWDLQTGEELRTFAGHEDSVNAVAITPDGER 377

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRS 403
                F      + +      +E  L   +  +   W    +P G+ 
Sbjct: 378 ALSGSFDKT---LKLWDLQTGEE--LRSFAGHRRWVWDVAITPDGKQ 419



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 106/324 (32%), Gaps = 47/324 (14%)

Query: 108 AQVLVTGRVIKEGKDRLRVEF----RLWDVKDRKQIIGKKFFSSPASWR-KIAHTISDDI 162
           +  +    +    +  L   +    +LWD++  +++            R  + H  SD +
Sbjct: 447 SDAISAVAITPNDRWALSASYDETLKLWDLQTGQEL------------RCFVGH--SDWV 492

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
                   G          +  +SG    +L + D +     +        +     S +
Sbjct: 493 RTVAITPDG----------KRALSGSEDTTLKLWDLESGQELFSLTGHTDPVRAVAISCD 542

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +     + D+     + L D R  +  +        + A   + +G+  L S  +D  +
Sbjct: 543 GKWALSGSEDN----TLKLWDMRTLKEIRSFMGHDDSVSAVAITPDGRWGL-SGSEDNTL 597

Query: 283 DIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++  DLQ+    R L        + + +PD  Q +  S     + L +       + R 
Sbjct: 598 KLW--DLQTGLEVRSLVGHRRWVDALAITPDGQQALSGSF---DDTLKLWDLLTGREVRS 652

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                 S      +P G   A +    +   +  +       +L+   S ++    +  G
Sbjct: 653 LVAHRRSVNAVAVTPDGKR-ALSGSFDDTLKLWDLNTGTVLAKLITSSS-VRCCAIASDG 710

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNG 425
            +++      GD G ++Y + + G
Sbjct: 711 CTVV-----AGDGGGQIYFLTIQG 729



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/326 (13%), Positives = 99/326 (30%), Gaps = 43/326 (13%)

Query: 109 QVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
             +    +  +G            +LWD++  +++  + F                    
Sbjct: 364 DSVNAVAITPDGERALSGSFDKTLKLWDLQTGEEL--RSFAG------------------ 403

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                +  ++  I    +  +SG    +L + D                +     +PN +
Sbjct: 404 ---HRRWVWDVAITPDGKQGLSGSFDQTLKLWDLATEEELDCFLGHSDAISAVAITPNDR 460

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
               A+YD+     + L D +  +  +        +     + +GKR  +S  +D  + +
Sbjct: 461 WALSASYDE----TLKLWDLQTGQELRCFVGHSDWVRTVAITPDGKR-ALSGSEDTTLKL 515

Query: 285 YSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +  DL+S      LT       + + S D    +  S+      L +       + R   
Sbjct: 516 W--DLESGQELFSLTGHTDPVRAVAISCDGKWALSGSE---DNTLKLWDMRTLKEIRSFM 570

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             + S      +P G     +        +  ++       L+     + A   +P G+ 
Sbjct: 571 GHDDSVSAVAITPDGRW-GLSGSEDNTLKLWDLQTGLEVRSLVGHRRWVDALAITPDGQQ 629

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNET 429
              +     D   KL+ + L GR   
Sbjct: 630 ---ALSGSFDDTLKLWDL-LTGREVR 651


>gi|168703277|ref|ZP_02735554.1| peptidase C14, caspase catalytic subunit p20 [Gemmata obscuriglobus
           UQM 2246]
          Length = 975

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 51/371 (13%), Positives = 113/371 (30%), Gaps = 49/371 (13%)

Query: 62  GGKVSEV-VSKDLQRSDVFNLISQDSFKQ------KITNPDSIPRFQDWNSLGAQVLVTG 114
             ++SE+ VS D      F + S D +         +    ++   + WN  G +     
Sbjct: 316 PTEISELCVSAD----GKFAVASSDRYPNGAHRAYDLNTGRALFTLEGWN--GDRFFTAV 369

Query: 115 RVIKEG---KDRLRVEFRLWDVKDRKQIIGKKFFSSPASW--RKIAHTISDDIYQS--IT 167
            V  +G           RL D    K+     +         R      S  +  +   T
Sbjct: 370 AVSPDGRTLATNQNGTLRLHDAATGKEKTRINYVVPAPGVKTRDFTFRTSKLLVFAPDCT 429

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                       V    V      S+ V           T   +Q++    FSP+ +++ 
Sbjct: 430 HVLIAAGDGNALVLVDPVKTAEFESVQVSH---------TFPHNQLVHAAAFSPDGKRMV 480

Query: 228 YATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIY 285
               +  + +    L +    +   R+   +  I    FS +G    +     +  + + 
Sbjct: 481 GGGEEQDKGVYFARLWNAETGKEQHRLWFGKGKIRCVAFSPDGATVAVGGDGENGKVTVT 540

Query: 286 SVDLQSNATE-RLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RIS 342
             +  +     +L         S ++S D   +   S             +G+ +   ++
Sbjct: 541 LFEAATGKERLQLPFPNTARVRSVAFSLDGKTLA-ASGSSYSPGFDSFSGDGTTRLFEVA 599

Query: 343 QDKEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS---NLQA 394
             KEA     +     ++P G ++          A  + + D +  + L  +     +++
Sbjct: 600 TGKEALTIDRTAIGLRFAPDGGVLV------GAVANAIYRWDTTTGKALTPEGPNSQIES 653

Query: 395 PTWSPSGRSLI 405
              +P G  ++
Sbjct: 654 IAVAPDGSRIV 664



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 70/243 (28%), Gaps = 43/243 (17%)

Query: 194 CVMDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            +   D    + LTP   +  +     +P+  ++       E     ++ + R  +   R
Sbjct: 630 AIYRWDTTTGKALTPEGPNSQIESIAVAPDGSRIV----ARELAGAAHVWNARSGKYVPR 685

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE----R---LTNTLFINI 305
           +        A   S +G   L+ ++ D+        L          R   LT   F+  
Sbjct: 686 LSVGWGSRSA--VSPDG-HLLVWLEADKTATFTKPSLPGRTLTGSRLRTFDLTAGAFVER 742

Query: 306 SASYSPDS-----SQIVFESDR-------EGKEQLYVMQSNGSDQKRIS----QDKEASY 349
                 D      S++ F +D                         R      +++    
Sbjct: 743 F-----DGIKGGISRVCFTADSKALVTSGSWGTGTRFWDVATGKLVRSFLADEKEQPHGT 797

Query: 350 FDPVWSPQGDLIA---FTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGR 402
                SP G + A   ++  S       V   D    + L +       + A  +SP G+
Sbjct: 798 SCSALSPNGKIFADATYSSHSSASAVYAVRLWDTETGKKLHDLSGHTDRIGAVAFSPDGK 857

Query: 403 SLI 405
            L+
Sbjct: 858 YLV 860



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/326 (11%), Positives = 87/326 (26%), Gaps = 58/326 (17%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAH------TISDDIYQ-------SITGEKGDFNS 175
           RL++V   K+        +    R           +++ IY+       ++T E  +   
Sbjct: 594 RLFEVATGKE--ALTIDRTAIGLRFAPDGGVLVGAVANAIYRWDTTTGKALTPEGPNSQI 651

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIR---YLTPSRDQILFEPRFSPNQQKVAYATYD 232
             + V+      + +           N R   Y+             SP+   + +   D
Sbjct: 652 ESIAVAPDGSRIVARELAGAAHV--WNARSGKYVPRLSVGWGSRSAVSPDGHLLVWLEAD 709

Query: 233 DEDIL-------------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                             R+   D       +R    +  I    F+++ K  + S    
Sbjct: 710 KTATFTKPSLPGRTLTGSRLRTFDLTAGAFVERFDGIKGGISRVCFTADSKALVTSGSWG 769

Query: 280 EAMDIYSVDLQSNATERLTNTLFINIS-------ASYSPDSSQIV---FESDREGK--EQ 327
                +  D+ +    R  + L            ++ SP+        + S         
Sbjct: 770 TGTRFW--DVATGKLVR--SFLADEKEQPHGTSCSALSPNGKIFADATYSSHSSASAVYA 825

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--------FSGEKFAIGVMKKD 379
           + +  +    +               +SP G  +   +               + V +  
Sbjct: 826 VRLWDTETGKKLHDLSGHTDRIGAVAFSPDGKYLVTGEPPYPFKWERRPRAGHVFVWEVA 885

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
               R+      + A  ++P G++L 
Sbjct: 886 TG-RRVASLPIEITAVAFAPDGKALA 910



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 53/155 (34%), Gaps = 17/155 (10%)

Query: 218 RFSPNQQKVA---YATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SPN +  A   Y+++     +  V L DT   +    +      I A  FS +GK  +
Sbjct: 801 ALSPNGKIFADATYSSHSSASAVYAVRLWDTETGKKLHDLSGHTDRIGAVAFSPDGKYLV 860

Query: 274 I--------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
                      ++  A  ++  ++ +    R+ +      + +++PD   +   +  +G 
Sbjct: 861 TGEPPYPFKWERRPRAGHVFVWEVATG--RRVASLPIEITAVAFAPDGKALA-VAVADGT 917

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            QL+   +                    + P G L
Sbjct: 918 IQLW--DAGTWQLSGEFPGPREWVTALTFGPDGRL 950


>gi|17232917|ref|NP_489455.1| WD-containing repeat protein [Nostoc sp. PCC 7120]
 gi|17134907|dbj|BAB77463.1| WD repeat protein [Nostoc sp. PCC 7120]
          Length = 349

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 80/205 (39%), Gaps = 15/205 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++VSG    ++ V +     ++    S    +     SP+ + V   + D      V +
Sbjct: 77  QTLVSGGQDKTIKVWELQTGKLKKTLRSDSGAINALAISPDGKTVVSGSGDR----LVRI 132

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
            D   ++  K +      +     SS+GK   IS+ + ++ +I   DL++   + RL  +
Sbjct: 133 WDITSNQPQKILRGHSGNVTHVDISSDGKTI-ISLDRGDSPEIKVWDLKTLEQKARLPYS 191

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            F +     SPD   ++         +L    +  ++++++ Q+          S  G  
Sbjct: 192 HFDD----ISPDGKTVLLTLPSS---KLVAWDTA-TNEQQVRQNFFQPSDSARISLDGQT 243

Query: 361 IAFTKFSGEK-FAIGVMKKDGSQER 384
           +   K +G++ F + V        +
Sbjct: 244 LVSIKRAGKRSFHLQVSDLKTGTIK 268



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 80/222 (36%), Gaps = 31/222 (13%)

Query: 213 ILFEPRFSP-----NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           I   P  S      + Q +            + + + +  +  K + +    I A   S 
Sbjct: 61  IEGHPTVSAIALGADGQTLV----SGGQDKTIKVWELQTGKLKKTLRSDSGAINALAISP 116

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKE 326
           +GK  ++S   D  + I+  D+ SN  ++ L            S D   I+   DR    
Sbjct: 117 DGKT-VVSGSGDRLVRIW--DITSNQPQKILRGHSGNVTHVDISSDGKTII-SLDRGDSP 172

Query: 327 QLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           ++ V      +QK R+      S+FD   SP G  +  T  S     +       +++++
Sbjct: 173 EIKVWDLKTLEQKARL----PYSHFD-DISPDGKTVLLTLPSS---KLVAWDTATNEQQV 224

Query: 386 LVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                N   P+     S  G++L+ S K+ G     L   DL
Sbjct: 225 ---RQNFFQPSDSARISLDGQTLV-SIKRAGKRSFHLQVSDL 262


>gi|88800134|ref|ZP_01115703.1| oligogalacturonate lyase [Reinekea sp. MED297]
 gi|88777115|gb|EAR08321.1| oligogalacturonate lyase [Reinekea sp. MED297]
          Length = 374

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 69/229 (30%), Gaps = 37/229 (16%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDE---AMD 283
           +A     +     +           I +  + +  P +   +        +         
Sbjct: 150 FAELYHRNPHCRLISIDLSTGERTVISDQNTWLGHPIYRPFDDSTVAFCHEGPHDLVTTR 209

Query: 284 IYSVDLQSNATERL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQK 339
           ++ V+       ++       +     + PD S+++F S   G+   ++  +  +G+   
Sbjct: 210 MWMVNEDGTNIRKVHEQAPGESCTHEFWVPDGSRMIFVSYLRGESDRWICSVDPDGAGSS 269

Query: 340 RISQDKEASYFDPVWSPQGDLIA---------FTKFSGEKFA----IGVMKKDGSQERLL 386
           R+ Q    S+    +   G L+               G +      + V      + R L
Sbjct: 270 RLMQMPPCSHIMSNY--DGTLLVGDGSDTPVDVANADGHELENDPYLYVFDLTRKETRKL 327

Query: 387 ------------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                           N   P+++P  + ++F   K+G     +Y  DL
Sbjct: 328 CRHDTSWEVLDGSRQVNHPHPSFTPDEKQVMFGSDKEGT--PAIYLADL 374



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 66/188 (35%), Gaps = 28/188 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG NIR +             + P+  ++ + +
Sbjct: 189 PFDDSTVAFCHEGPHDLVTTRMWMVNEDGTNIRKVHEQAPGESCTHEFWVPDGSRMIFVS 248

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--------ISVQKDE- 280
           Y   +  R +  +D     + + +       +   +  +G   +             D  
Sbjct: 249 YLRGESDRWICSVDPDGAGSSRLMQMPPCSHIMSNY--DGTLLVGDGSDTPVDVANADGH 306

Query: 281 ----AMDIYSVDLQSNATERL----TNTLFINIS-------ASYSPDSSQIVFESDREGK 325
                  +Y  DL    T +L    T+   ++ S        S++PD  Q++F SD+EG 
Sbjct: 307 ELENDPYLYVFDLTRKETRKLCRHDTSWEVLDGSRQVNHPHPSFTPDEKQVMFGSDKEGT 366

Query: 326 EQLYVMQS 333
             +Y+   
Sbjct: 367 PAIYLADL 374



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 67/201 (33%), Gaps = 30/201 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDR 322
            F+ +G   L +   D+  + Y +D+      +LT     N    + S D +   +    
Sbjct: 34  SFTRDGSHLLFAGNFDQHWNYYLLDMTKQTARQLTEGEGDNSFGGFLSTDDTVFYYV--- 90

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG-------------------DLIAF 363
           +    L  ++ +  +   + +  +       W P                     D   F
Sbjct: 91  KHNRDLMRVRLSDGEHTTVYEVPDGWVGYGTWVPNSECTKVVGIEIDADDYIELTDWKKF 150

Query: 364 TKFSGEKFAIGVMKKD-GSQERLLVEDSNLQ--APTWSP-SGRSLIFSRKKDGDT-GSKL 418
            +         ++  D  + ER ++ D N     P + P    ++ F  +   D   +++
Sbjct: 151 AELYHRNPHCRLISIDLSTGERTVISDQNTWLGHPIYRPFDDSTVAFCHEGPHDLVTTRM 210

Query: 419 YSIDLNGRNETLIN--TPAYA 437
           + ++ +G N   ++   P  +
Sbjct: 211 WMVNEDGTNIRKVHEQAPGES 231



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 81/247 (32%), Gaps = 36/247 (14%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGKRAL 273
           ++  F+ +   + +A   + D    Y +     +  +++           F S++     
Sbjct: 31  YQKSFTRDGSHLLFA--GNFDQHWNYYLLDMTKQTARQLTEGEGDNSFGGFLSTD-DTVF 87

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSP--------------------- 311
             V+     D+  V L       +           ++ P                     
Sbjct: 88  YYVKH--NRDLMRVRLSDGEHTTVYEVPDGWVGYGTWVPNSECTKVVGIEIDADDYIELT 145

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEK 370
           D  +      R    +L  +  +  ++  IS D+      P++ P     +AF       
Sbjct: 146 DWKKFAELYHRNPHCRLISIDLSTGERTVIS-DQNTWLGHPIYRPFDDSTVAFCHEGPHD 204

Query: 371 F---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                + ++ +DG+  R + E +  ++ T   W P G  +IF     G++   + S+D +
Sbjct: 205 LVTTRMWMVNEDGTNIRKVHEQAPGESCTHEFWVPDGSRMIFVSYLRGESDRWICSVDPD 264

Query: 425 GRNETLI 431
           G   + +
Sbjct: 265 GAGSSRL 271



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 36/120 (30%), Gaps = 17/120 (14%)

Query: 335 GSDQKRISQDK----EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           G+   R++          ++   ++  G  + F     + +   ++       R L E  
Sbjct: 12  GARLTRLTPKGAICHRTYFYQKSFTRDGSHLLFAGNFDQHWNYYLLDMTKQTARQLTEGE 71

Query: 391 NLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTP-AYASDPQWVG 444
                ++    S       + +         L  + L +G + T+   P  +     WV 
Sbjct: 72  GDN--SFGGFLSTDDTVFYYVKH-----NRDLMRVRLSDGEHTTVYEVPDGWVGYGTWVP 124


>gi|168698823|ref|ZP_02731100.1| WD-repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 364

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 70/186 (37%), Gaps = 10/186 (5%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINI 305
            P  +    +++ A   S +GK    +   D  + ++ V      TER   LT  +    
Sbjct: 23  QPAPVRAHTALVHAVTVSPDGKTLA-TAGFDNVVKLWGVGPDGTLTERKVALTGHVGPVY 81

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + ++ P  +++V  + ++   +++         K   +          +SP G  +A T 
Sbjct: 82  AVAFHPTDTKLVATASQDKTAKIW--DLTDGKSKVELKGHTDIVDAVAFSPDGKTLA-TA 138

Query: 366 FSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            + +   +     DG + + L   D ++ +  +SP G+ L  S     D   K++ +   
Sbjct: 139 GADKTVRLW-NPTDGKELKNLGAHDGSVYSLAFSPDGKLLA-SAGAGKDNLVKVWDVKGQ 196

Query: 425 GRNETL 430
                L
Sbjct: 197 KEFTQL 202



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 69/179 (38%), Gaps = 7/179 (3%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + +A A +D+   L     D  +      +      + A  F     + + +  
Sbjct: 38  TVSPDGKTLATAGFDNVVKLWGVGPDGTLTERKVALTGHVGPVYAVAFHPTDTKLVATAS 97

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D+   I+ +     +   L     I  + ++SPD   +   +  +   +L+   ++G +
Sbjct: 98  QDKTAKIWDL-TDGKSKVELKGHTDIVDAVAFSPDGKTLA-TAGADKTVRLWN-PTDGKE 154

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            K +    + S +   +SP G L+A +  +G+   + V    G +E    +    + P 
Sbjct: 155 LKNL-GAHDGSVYSLAFSPDGKLLA-SAGAGKDNLVKVWDVKGQKE--FTQLKGHEQPV 209



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 40/111 (36%), Gaps = 6/111 (5%)

Query: 165 SITGEKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           ++TG  G   +     +++  V +     +  + D      +        I+    FSP+
Sbjct: 72  ALTGHVGPVYAVAFHPTDTKLVATASQDKTAKIWDLTDGKSKVELKGHTDIVDAVAFSPD 131

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            + +A A  D      V L +    +  K +G     + +  FS +GK   
Sbjct: 132 GKTLATAGADK----TVRLWNPTDGKELKNLGAHDGSVYSLAFSPDGKLLA 178


>gi|217974850|ref|YP_002359601.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Shewanella baltica OS223]
 gi|217499985|gb|ACK48178.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella baltica OS223]
          Length = 826

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 82/226 (36%), Gaps = 13/226 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++  +A    ++          T+  R  + I ++     A ++  +  +  + ++  + 
Sbjct: 337 DEDVLAKVKAENAKAKGETYQSTKAPRKIQLIQDWGWTQSAIQWHESEDKLALMLEATDN 396

Query: 282 MDIYS--VDLQSNA---TERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQS 333
            D +   VDL         RL +  ++N   +   + P +  + + S+  G  QLYV   
Sbjct: 397 KDRWIASVDLAKGKFTTEHRLHDDAWVNYDYNQFGWLPGTDSLYYLSEESGYSQLYVKGL 456

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSN 391
            G   + ++Q K     D   SP  + I +         + +  +     +   L +   
Sbjct: 457 -GEKPRALTQGKFV-VSDIQLSPDANYIYYKANQTHPGIYNVHRVNLATGKNEQLTQWDG 514

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               + SP G  L+ +  +      +LY   + G  + L +  + A
Sbjct: 515 NLDYSLSPDGTQLLLNASRRTQPN-ELYVQPIGGELKQLTSYTSDA 559



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 63/173 (36%), Gaps = 13/173 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSR-------DQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
               +   D A  ++ T  R       +    +  + P    + Y + +        L  
Sbjct: 397 KDRWIASVDLAKGKFTTEHRLHDDAWVNYDYNQFGWLPGTDSLYYLSEESG---YSQLYV 453

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
             +   P+ +   + ++   + S +         +      +++ V+L +   E+LT   
Sbjct: 454 KGLGEKPRALTQGKFVVSDIQLSPDANYIYYKANQTHPGIYNVHRVNLATGKNEQLTQWD 513

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             N+  S SPD +Q++  + R  +     +Q  G + K+++     ++ +  W
Sbjct: 514 G-NLDYSLSPDGTQLLLNASRRTQPNELYVQPIGGELKQLTSYTSDAFKNYPW 565


>gi|269836538|ref|YP_003318766.1| hypothetical protein Sthe_0506 [Sphaerobacter thermophilus DSM
           20745]
 gi|269785801|gb|ACZ37944.1| hypothetical protein Sthe_0506 [Sphaerobacter thermophilus DSM
           20745]
          Length = 541

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 68/176 (38%), Gaps = 12/176 (6%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKE 326
           +G   +    +D   DI++ DL      R+  T       + S   S IV+ S D  G+ 
Sbjct: 61  DGSLIVWQDSRDGTPDIFAYDLDDAREFRVAQTPGHRTQPAIS--GSLIVWVSGDEPGRR 118

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERL 385
            +  +            D+ A   DP  S  G+++ + +     + I G     G +  +
Sbjct: 119 TIEGIDLTTRTTFT-VTDQPADVADPAVS--GNVVIWRERRDGAWDIVGKNLATGERFEV 175

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDP 440
             +  N   PT S  G ++I+    DG+    L+  DL   R E L  TP    +P
Sbjct: 176 TRDPVNQAHPTIS--GAAIIWQAYVDGNW--DLFRYDLGSQRVEQLTATPDDEVEP 227


>gi|160876987|ref|YP_001556303.1| peptidase S9 prolyl oligopeptidase [Shewanella baltica OS195]
 gi|160862509|gb|ABX51043.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella baltica OS195]
 gi|315269190|gb|ADT96043.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           baltica OS678]
          Length = 826

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 82/226 (36%), Gaps = 13/226 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++  +A    ++          T+  R  + I ++     A ++  +  +  + ++  + 
Sbjct: 337 DEDVLAKVKAENAKAKGETYQSTKAPRKIQLIQDWGWTQSAIQWHESEDKLALMLEATDN 396

Query: 282 MDIYS--VDLQSNA---TERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQS 333
            D +   VDL         RL +  ++N   +   + P +  + + S+  G  QLYV   
Sbjct: 397 KDRWIASVDLAKGKFTTEHRLHDDAWVNYDYNQFGWLPGTDSLYYLSEESGYSQLYVKGL 456

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSN 391
            G   + ++Q K     D   SP  + I +         + +  +     +   L +   
Sbjct: 457 -GEKPRALTQGKFV-VSDIQLSPDANYIYYKANQTHPGIYNVHRVNLATGKNEQLTQWDG 514

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               + SP G  L+ +  +      +LY   + G  + L +  + A
Sbjct: 515 NLDYSLSPDGTQLLLNASRRTQPN-ELYVQPIGGELKQLTSYTSDA 559



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 63/173 (36%), Gaps = 13/173 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSR-------DQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
               +   D A  ++ T  R       +    +  + P    + Y + +        L  
Sbjct: 397 KDRWIASVDLAKGKFTTEHRLHDDAWVNYDYNQFGWLPGTDSLYYLSEESG---YSQLYV 453

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
             +   P+ +   + ++   + S +         +      +++ V+L +   E+LT   
Sbjct: 454 KGLGEKPRALTQGKFVVSDIQLSPDANYIYYKANQTHPGIYNVHRVNLATGKNEQLTQWD 513

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             N+  S SPD +Q++  + R  +     +Q  G + K+++     ++ +  W
Sbjct: 514 G-NLDYSLSPDGTQLLLNASRRTQPNELYVQPIGGELKQLTSYTSDAFKNYPW 565


>gi|328793719|ref|XP_003251918.1| PREDICTED: WD repeat-containing protein 5 [Apis mellifera]
          Length = 334

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 83/224 (37%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++Y      + +   +FSPN + +A ++ D      + +  +   +  K I   +  I
Sbjct: 35  YTLKYTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGSYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + I+ +       + L          +++P S+ IV  S
Sbjct: 91  SDVAWSSD-SRLLVSASDDKTLKIWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 149 X---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 203

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|317149898|ref|XP_001823398.2| hypothetical protein AOR_1_1710114 [Aspergillus oryzae RIB40]
          Length = 426

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 68/215 (31%), Gaps = 39/215 (18%)

Query: 214 LFEPRFSPNQQKVAY---ATYDDEDILRVYL----------MDTRIDRAPKRIGNFRSMI 260
            F+  +S +   + Y     +        ++          M+      P   G   ++ 
Sbjct: 218 AFQSSWSSDGNWLTYGVGYWFAGRASNGGWIVCSKADGSEAMNLTTSAIPLSAGGNNTLN 277

Query: 261 LA-PRFSSNGKRALISVQKDEAMD-------IYSVDLQ------SNATERLTNTLFINIS 306
              P F  +G + +  V   +A D       +  + L       +     LTN  + +  
Sbjct: 278 TGFPSFLPDGTKIVFRVWGADAEDGDTSQLGLRILHLDQVTANGTYPVTVLTN--WWDTL 335

Query: 307 ASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S+SPD ++IVF     G   ++  +  +GSD    S  +     +           +  
Sbjct: 336 PSFSPDGTKIVFTRRVSGSNYEVCTIAPDGSDLIMYSTGEYGFQSECA--------LYDN 387

Query: 366 FSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSP 399
                  I +M  DG  +R L         P + P
Sbjct: 388 TFQPYGQINIMDADGGNKRALTNSLWEDSMPAYVP 422



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 51/366 (13%), Positives = 115/366 (31%), Gaps = 102/366 (27%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK---- 225
           K   +    F+  S      + S+  +  DG   R +       L  P +S + +     
Sbjct: 16  KWAGHGWETFMGLSSWEHTQELSIFAIRPDGTGFRKVIGKEGYALGSPSWSADGKCIVYY 75

Query: 226 ----------------------VAYATYDDEDILRVYLMDTRIDRAPKRIGN-------- 255
                                 +    +       V +  + +   P+ +GN        
Sbjct: 76  EMTRETTWDAHSSFDVNSANSSIVSVDFATGTDRVVEVNTSGVKIYPQYLGNTSSIGYLL 135

Query: 256 ---------------------------FRSMILAPRFSSN----GKRALISVQKDEAMDI 284
                                      F ++  A R +      G  A+IS+      + 
Sbjct: 136 KGTTYYNTTARSPACWDANWTYRFTDVFPTINTAGRLAITQKQLGDSAVISLNATGTDNE 195

Query: 285 YSVD------LQSNATERLTNTLFINISASYSPDSSQI------VFESDREGKEQLYVMQ 332
              D      L  ++ E+ T+  F    +S+S D + +       F         +   +
Sbjct: 196 TVFDPVARGILSLSSVEQGTSGAF---QSSWSSDGNWLTYGVGYWFAGRASNGGWIVCSK 252

Query: 333 SNGSDQKRISQ---------DKEASYFDPVWSPQGDLIAFTKF-----SGEKFAIGV--- 375
           ++GS+   ++          +   +   P + P G  I F  +      G+   +G+   
Sbjct: 253 ADGSEAMNLTTSAIPLSAGGNNTLNTGFPSFLPDGTKIVFRVWGADAEDGDTSQLGLRIL 312

Query: 376 ----MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
               +  +G+    ++ +     P++SP G  ++F+R+  G +  ++ +I  +G +  + 
Sbjct: 313 HLDQVTANGTYPVTVLTNWWDTLPSFSPDGTKIVFTRRVSG-SNYEVCTIAPDGSDLIMY 371

Query: 432 NTPAYA 437
           +T  Y 
Sbjct: 372 STGEYG 377


>gi|300864774|ref|ZP_07109624.1| hypothetical protein OSCI_1090002 [Oscillatoria sp. PCC 6506]
 gi|300337178|emb|CBN54772.1| hypothetical protein OSCI_1090002 [Oscillatoria sp. PCC 6506]
          Length = 309

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 70/189 (37%), Gaps = 13/189 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  + +      + L D   ++       F   + +   S +G   L++  
Sbjct: 70  AFSPDSQTLASGSDEL-----IDLWDVASNQKLDIKSGFSVPVCSITLSPDG-EILVAGS 123

Query: 278 KDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + ++  DL +      L    +   S ++SPD   +   S   G   + +   + +
Sbjct: 124 SDGTIGLW--DLTNCKPFTTLNAHSYPVWSVAFSPDGKTLASGS---GDGTIGLWDVSTN 178

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                        +   +SP G L+A +    +   I  +        L+    ++++  
Sbjct: 179 KPLATLLGHSYPVWSVAFSPDGTLLA-SSSGDKTIKIWQLSMGRDFAALIGHSDSVESLA 237

Query: 397 WSPSGRSLI 405
           +SP G +L+
Sbjct: 238 FSPQGDTLV 246



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 69/208 (33%), Gaps = 26/208 (12%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             +     + +      I A   S +G     S   D+ + ++  DL++     L     
Sbjct: 5   QNQTWECVRTLTGHTQGIRAIAISPDGNTLA-SSSNDKTVKLW--DLKTGQESTLNPEPD 61

Query: 303 INISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +  S    ++SPDS  +   SD    E + +     + +  I             SP G+
Sbjct: 62  LVFSFYPLAFSPDSQTLASGSD----ELIDLWDVASNQKLDIKSGFSVPVCSITLSPDGE 117

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRSLIFSRKKDGDTG 415
           ++      G    IG+     +  +     +    P W    SP G++L       GD  
Sbjct: 118 ILVAGSSDGT---IGLWDL--TNCKPFTTLNAHSYPVWSVAFSPDGKTLA---SGSGDGT 169

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWV 443
             L+ +  N    TL+      S P W 
Sbjct: 170 IGLWDVSTNKPLATLLGH----SYPVWS 193



 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 77/221 (34%), Gaps = 20/221 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +     SP+ + +   + D      + L D    +    +      + +  F
Sbjct: 99  IKSGFSVPVCSITLSPDGEILVAGSSDG----TIGLWDLTNCKPFTTLNAHSYPVWSVAF 154

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +GK    S   D  + ++ V         L    +   S ++SPD + +   S   G 
Sbjct: 155 SPDGKTLA-SGSGDGTIGLWDVSTN-KPLATLLGHSYPVWSVAFSPDGTLLASSS---GD 209

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG----- 380
           + + + Q +             S     +SPQGD +      G    +  + KD      
Sbjct: 210 KTIKIWQLSMGRDFAALIGHSDSVESLAFSPQGDTLVSGSIDGTVM-LWQLSKDLEVGVK 268

Query: 381 -SQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            S +R L + SN +++  +SP G ++        D   K++
Sbjct: 269 ISPDRTLTDHSNSVRSVAFSPDGNTIA---SGSNDATIKIW 306



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 12/188 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+G    ++ + D           +    ++   FSP+ + +A  + D      + L D 
Sbjct: 120 VAGSSDGTIGLWDLTNCKPFTTLNAHSYPVWSVAFSPDGKTLASGSGDG----TIGLWDV 175

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             ++    +      + +  FS +G     S   D+ + I+ + +       L       
Sbjct: 176 STNKPLATLLGHSYPVWSVAFSPDGTLLA-SSSGDKTIKIWQLSM-GRDFAALIGHSDSV 233

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----DQKRISQDKEASYFDPVWSPQGD 359
            S ++SP    +V  S  +G   L+ +  +          R   D   S     +SP G+
Sbjct: 234 ESLAFSPQGDTLVSGSI-DGTVMLWQLSKDLEVGVKISPDRTLTDHSNSVRSVAFSPDGN 292

Query: 360 LIAFTKFS 367
            IA     
Sbjct: 293 TIASGSND 300



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 87/236 (36%), Gaps = 28/236 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP- 263
                  Q +     SP+   +A ++ D      V L D +  +    +     ++ +  
Sbjct: 13  RTLTGHTQGIRAIAISPDGNTLASSSNDK----TVKLWDLKTGQEST-LNPEPDLVFSFY 67

Query: 264 --RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFES 320
              FS + +        DE +D++  D+ SN    + +   + + S + SPD   +V  S
Sbjct: 68  PLAFSPDSQTLA--SGSDELIDLW--DVASNQKLDIKSGFSVPVCSITLSPDGEILVAGS 123

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             +G   L+    + ++ K  +     SY  +   +SP G  +A     G    IG+   
Sbjct: 124 S-DGTIGLW----DLTNCKPFTTLNAHSYPVWSVAFSPDGKTLASGSGDGT---IGLWDV 175

Query: 379 DGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             ++    LL     + +  +SP G  L       GD   K++ + +      LI 
Sbjct: 176 STNKPLATLLGHSYPVWSVAFSPDGTLLA---SSSGDKTIKIWQLSMGRDFAALIG 228



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 53/146 (36%), Gaps = 11/146 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG    ++ + D                ++   FSP+   +A ++ D      + +
Sbjct: 159 KTLASGSGDGTIGLWDVSTNKPLATLLGHSYPVWSVAFSPDGTLLASSSGDK----TIKI 214

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNAT----E 295
               + R    +      + +  FS  G   + S   D  + ++ +  DL+         
Sbjct: 215 WQLSMGRDFAALIGHSDSVESLAFSPQGDTLV-SGSIDGTVMLWQLSKDLEVGVKISPDR 273

Query: 296 RLTNTLFINISASYSPDSSQIVFESD 321
            LT+      S ++SPD + I   S+
Sbjct: 274 TLTDHSNSVRSVAFSPDGNTIASGSN 299


>gi|315499727|ref|YP_004088530.1| peptidase s9b dipeptidylpeptidase iv domain protein [Asticcacaulis
           excentricus CB 48]
 gi|315417739|gb|ADU14379.1| peptidase S9B dipeptidylpeptidase IV domain protein [Asticcacaulis
           excentricus CB 48]
          Length = 741

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 105/336 (31%), Gaps = 60/336 (17%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP----- 217
               T   GD     L      V+ +   +L V D      R +TP  + ++        
Sbjct: 146 ISRATETPGDEVDAKLNPKGGQVAYVRDQTLYVRDLATGTERAITPKGEGVISYGVAEFI 205

Query: 218 -----------RFSPNQQKVAYATYDDEDI------------------------------ 236
                       +SP+  K+ YA  D+  +                              
Sbjct: 206 AQEELNRYTGYWWSPDGTKIVYAKVDESPVDIVERFEINGTGTRTVDQRYPKAGRPNAIV 265

Query: 237 -LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDE-AMDIYSVDLQSNA 293
            L V+ + T  D       N    +    +S +G+   +  + +D+  +D+    L   A
Sbjct: 266 TLFVHDLKTGTDVPLDLGANSDIYLARVNWSPDGQSVFVQRLSRDQKTLDLLQYLLTGGA 325

Query: 294 TE-RLTNTLF----INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
               LT T      +N    +  D  + ++ S+R+G   LY+   +G   +++++     
Sbjct: 326 PRTVLTETSDTWVELNNDLRFLKDG-RFLWASERDGNNHLYLYDKDGKLIRQVTRGDFPV 384

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGRSLI 405
                       + F         +G+ K      S+   + +     +   SP+ ++ I
Sbjct: 385 AKVAAVDEAKGEVWFESSYKAVVEMGLYKTSFLKPSEPVAVTKAGGWWSTDVSPNAKAFI 444

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDP 440
                D  T ++    D  G+    I   A  A  P
Sbjct: 445 -GTYTDPQTPAQTGLYDATGKRVRWIEENALDAKHP 479


>gi|152987148|ref|YP_001346905.1| hypothetical protein PSPA7_1520 [Pseudomonas aeruginosa PA7]
 gi|150962306|gb|ABR84331.1| hypothetical protein PSPA7_1520 [Pseudomonas aeruginosa PA7]
          Length = 335

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 18/182 (9%)

Query: 269 GKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESD 321
           G R +        D + ++Y  D +S +T +L N    NI     A +SPD   + F   
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQL-NQPGWNIEDPMNAHFSPDGRHLTFMGR 103

Query: 322 REGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           + G   ++     G+     ++        DP +S  G  +        + A  V   DG
Sbjct: 104 QNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQVVLKHEGDIRLATLVFNGDG 163

Query: 381 SQER-----LLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           S        +  +    +   P  +PSG+ ++++         ++   +L     + + T
Sbjct: 164 SVGVSTWKAVTSDGWTTEESMPFLTPSGKYVVYAT--GAGDSLRVVRRNLENGQVSALAT 221

Query: 434 PA 435
           PA
Sbjct: 222 PA 223



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 59/188 (31%), Gaps = 14/188 (7%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQK 278
             ++ Y +Y +       L          R  N     +       FS +G+      ++
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIEDPMNAHFSPDGRHLTFMGRQ 104

Query: 279 DEAMDIYSVDLQSNA-TERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNG- 335
           + A  +++  +        LT      N    +S D  Q+V + + + +    V   +G 
Sbjct: 105 NGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQVVLKHEGDIRLATLVFNGDGS 164

Query: 336 ---SDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--- 388
              S  K ++ D   +    P  +P G  + +   +G+   +     +  Q   L     
Sbjct: 165 VGVSTWKAVTSDGWTTEESMPFLTPSGKYVVYATGAGDSLRVVRRNLENGQVSALATPAA 224

Query: 389 DSNLQAPT 396
                 P 
Sbjct: 225 GGRDYYPV 232



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 77/278 (27%), Gaps = 15/278 (5%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH                     L     +  G   ++L + D    + R L      I 
Sbjct: 25  AHAACTANLALQPASSLPALGGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIE 84

Query: 215 --FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKR 271
                 FSP+ + + +          V+       +AP  +          P+FS +G++
Sbjct: 85  DPMNAHFSPDGRHLTFMG-RQNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQ 143

Query: 272 ALISVQKDEAMDIYSVDLQS----NATERLTNTLFI--NISASYSPDSSQIVFESDREGK 325
            ++  + D  +     +       +  + +T+  +         +P    +V+ +     
Sbjct: 144 VVLKHEGDIRLATLVFNGDGSVGVSTWKAVTSDGWTTEESMPFLTPSGKYVVYATGAGDS 203

Query: 326 EQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---KKDGS 381
            ++            + +       + PV                   + ++      G+
Sbjct: 204 LRVVRRNLENGQVSALATPAAGGRDYYPVVRDYTAYFLSRTQPAGNDQLAMVVPNSPPGT 263

Query: 382 QERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKL 418
              L +          +P +   L+FS      T S L
Sbjct: 264 PAILPLNHCQGDNSDAAPVNEDYLVFSSTSFDPTYSLL 301


>gi|327354698|gb|EGE83555.1| WD repeat-containing protein [Ajellomyces dermatitidis ATCC 18188]
          Length = 497

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 73/211 (34%), Gaps = 20/211 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +Y+       +   +FSP+   +A  + D      + + DT   R         + I
Sbjct: 147 YREKYVLKGHQLGVSSVKFSPDGSMIASCSAD----ATIKIWDTASGRLIHTFEGHLAGI 202

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIV 317
               +S +G     S   D+++ ++ V   +        L +  +I   A +SP  + +V
Sbjct: 203 STISWSPDGALIA-SGSDDKSIRLWHVP--TGKPHPNPFLGHHNYIYCIA-FSPKGNMLV 258

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S     E +Y+     +   R                 G LI      G    I +  
Sbjct: 259 SGSY---DEAVYLWDVRSARVMRSLPAHSDPVAGVDVVRDGTLIVSCASDG---LIRIWD 312

Query: 378 KDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
               Q  R LV + N  + A  +SP+G+ ++
Sbjct: 313 TATGQCLRTLVHEDNPPVSAVKFSPNGKYVL 343



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 58/178 (32%), Gaps = 10/178 (5%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR-AP 250
           ++ + D     + +        +    +SP+   +A  + D      + L      +  P
Sbjct: 180 TIKIWDTASGRLIHTFEGHLAGISTISWSPDGALIASGSDDK----SIRLWHVPTGKPHP 235

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                  + I    FS  G   + S   DEA+ ++ V   +     L             
Sbjct: 236 NPFLGHHNYIYCIAFSPKGNMLV-SGSYDEAVYLWDV-RSARVMRSLPAHSDPVAGVDVV 293

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-AFTKFS 367
            D + IV  +  +G  +++   + G   + +  +         +SP G  + A+T   
Sbjct: 294 RDGTLIVSCAS-DGLIRIWDT-ATGQCLRTLVHEDNPPVSAVKFSPNGKYVLAWTHDD 349


>gi|209527958|ref|ZP_03276443.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
 gi|209491617|gb|EDZ91987.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
          Length = 679

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 76/216 (35%), Gaps = 21/216 (9%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    FSPN + +   + D         +        + I      + A  FS NG
Sbjct: 441 HSSWVRALAFSPNGEIMVSGSNDK-------TIRMWWGSRQRTIEGHTGSVHALVFSPNG 493

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            + L S  +D  + ++  D        +        + +++P  + +   S  +   +L+
Sbjct: 494 -QILASGSEDRTIILW--DTNGRRLSTILAHDLPVNALAFNPQGNVLASAS-ADASIRLW 549

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +    S ++        S     +SP G+ IA     G    + +   +  ++  + E 
Sbjct: 550 NVNVGDSSRRLTITGHGDSINAIAYSPDGETIASASDDGT---VRLWNANTGEQLRVFEG 606

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               +++   +P G++LI      G     L++++ 
Sbjct: 607 HRGPVKSLVITPDGQTLI-----AGGDHIVLWNLNT 637



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 88/261 (33%), Gaps = 34/261 (13%)

Query: 182 ESVVSGIIKNSLCVMDR----DGANIRYLTPSRDQIL---FEPRFSPNQQKVAYATYDDE 234
            + V G  +  L   +      G   R       + L   +    +P+ + +   T+   
Sbjct: 365 YTQVDGYRRYGLIPANPMLVIRGWPNRMWLLGHKEALGQVYALAIAPDGETLVAGTFGT- 423

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               +                  S + A  FS NG   ++S   D+ + ++      +  
Sbjct: 424 ----IRRWGIHSGEVFNPESVHSSWVRALAFSPNG-EIMVSGSNDKTIRMWW----GSRQ 474

Query: 295 ERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQ--DKEASYFD 351
             +        +  +SP+   +   S DR     + +  +NG   +R+S     +     
Sbjct: 475 RTIEGHTGSVHALVFSPNGQILASGSEDRT----IILWDTNG---RRLSTILAHDLPVNA 527

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRK 409
             ++PQG+++A +  +     +  +    S  RL +        A  +SP G ++  +  
Sbjct: 528 LAFNPQGNVLA-SASADASIRLWNVNVGDSSRRLTITGHGDSINAIAYSPDGETIASASD 586

Query: 410 KDGDTGSKLYSIDLNGRNETL 430
              D   +L++ +  G    +
Sbjct: 587 ---DGTVRLWNAN-TGEQLRV 603



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/132 (12%), Positives = 41/132 (31%), Gaps = 14/132 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S      L  ++   ++ R         +    +SP+ + +A A+ D      V L +  
Sbjct: 541 SADASIRLWNVNVGDSSRRLTITGHGDSINAIAYSPDGETIASASDDG----TVRLWNAN 596

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN- 304
                +     R  + +   + +G+  +          I   +L +     +T       
Sbjct: 597 TGEQLRVFEGHRGPVKSLVITPDGQTLIA-----GGDHIVLWNLNTGEI--ITTLWGHGD 649

Query: 305 --ISASYSPDSS 314
              + + +PD  
Sbjct: 650 LITALALTPDGK 661


>gi|156744332|ref|YP_001434461.1| hypothetical protein Rcas_4427 [Roseiflexus castenholzii DSM 13941]
 gi|156235660|gb|ABU60443.1| conserved hypothetical protein [Roseiflexus castenholzii DSM 13941]
          Length = 620

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 52/279 (18%), Positives = 97/279 (34%), Gaps = 39/279 (13%)

Query: 191 NSLCVMDRDGANIRYLTPS-RDQILFEPRFSPNQQKVAYATYDDEDIL---RVYLMDTRI 246
           ++L V++ D  +IR L+P  R +   +P  SP+   +AYA  +        R++ +    
Sbjct: 331 STLWVLELDSGSIRQLSPPPRGRSCADPVLSPDGTTIAYAVDESGGAPPQLRIFSVQVFP 390

Query: 247 DRAPKRIGNFRSMIL--APRFSSNGKRALISVQKDEAMDIYSVDLQSNATE----RLTNT 300
                 +          AP++  + +    +  +D    ++  +      +     L + 
Sbjct: 391 GAPAVALTPSGDEWSRYAPQWLDDARLVYAATAEDGRRTLFLRESDGTELDIGMALLVSG 450

Query: 301 LFINISASYS--------PDSSQI---VFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                SA Y         PD   I    F  D  G + L ++  +G++ +R+S      +
Sbjct: 451 TGGQRSARYDGFGRLIAAPDGRAIAVEAFRIDGSGAD-LLILNRSGAEIERLSPIAAGFW 509

Query: 350 FDP-VWSPQGDL----IAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSG- 401
             P  WS  G L     A    +  ++ + V   DG    +       +L   T   +  
Sbjct: 510 NRPVAWSADGALYYLSTACASDAVYEYTLHVRSADGGDRVIAAGIATGDLGVFTVHQNAL 569

Query: 402 RSLIFSRKKDGDTGS---------KLYSIDLNGRNETLI 431
             + F R   G  G           L+  DL G   T +
Sbjct: 570 AYVTFDRLPGGPGGPLRVAPDDPAALWYWDLAGNTRTRL 608



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 78/244 (31%), Gaps = 33/244 (13%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--------MDI 284
           D DI R+            R G F   + A     N            A          +
Sbjct: 275 DGDIWRISNGAPENLTERLRAGQF-GDVTALTTRPNAPLLAFCATAPGAVAADVTAASTL 333

Query: 285 YSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGK--EQLYVMQS---NGSD 337
           + ++L S +  +L+             SPD + I +  D  G    QL +       G+ 
Sbjct: 334 WVLELDSGSIRQLSPPPRGRSCADPVLSPDGTTIAYAVDESGGAPPQLRIFSVQVFPGAP 393

Query: 338 QKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-----RLLVEDSN 391
              ++    E S + P W     L+        +  + + + DG++       L+     
Sbjct: 394 AVALTPSGDEWSRYAPQWLDDARLVYAATAEDGRRTLFLRESDGTELDIGMALLVSGTGG 453

Query: 392 LQAPTW--------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--TPAYASDP- 440
            ++  +        +P GR++     +   +G+ L  ++ +G     ++     + + P 
Sbjct: 454 QRSARYDGFGRLIAAPDGRAIAVEAFRIDGSGADLLILNRSGAEIERLSPIAAGFWNRPV 513

Query: 441 QWVG 444
            W  
Sbjct: 514 AWSA 517


>gi|297193891|ref|ZP_06911289.1| protease [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151989|gb|EDY64161.2| protease [Streptomyces pristinaespiralis ATCC 25486]
          Length = 1112

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 45/120 (37%), Gaps = 10/120 (8%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGK 325
           G     + + D  + I  +  +        RLT          +SPD   I + + R   
Sbjct: 23  GDLLCFAAEDD--LWIAPLVPEGKQPDRAWRLTVDRTRVGHPRFSPDGRHIAYTNWRSLD 80

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI----GVMKKDGS 381
            ++++   +G   +R+S           W+P G ++A +   G+ F+       +  DGS
Sbjct: 81  PEIHLAPVDGGPARRLSYWGSTDTRVCGWTPDGQILAVSSH-GQPFSYFSWAYSIPTDGS 139



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 43/211 (20%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+   R+ +  PRFS +G+    +  +    +I+   +      RL+     +     ++
Sbjct: 51  RLTVDRTRVGHPRFSPDGRHIAYTNWRSLDPEIHLAPVDGGPARRLSYWGSTDTRVCGWT 110

Query: 311 PDSSQIVFESDREGKEQL---YVMQSNGSDQKRISQDKEASYFDPVWS------------ 355
           PD   +   S  +        Y + ++GS   R+     +       S            
Sbjct: 111 PDGQILAVSSHGQPFSYFSWAYSIPTDGSPGGRLPWGPVSDIAVTDESERPSQAGGTGCE 170

Query: 356 ---------PQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVE-DSNLQAP--------- 395
                    P  +  A+ ++ G     + +       E+LL + D +L  P         
Sbjct: 171 RRTLLLTGKPPHEPAAWKRYRGGATGRLWLH-----GEQLLPDLDGHLDCPMFIHGDGAA 225

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            WS     + F    +G     LYS   +G 
Sbjct: 226 RWSEDDGRVAFLSDHEG--VGNLYSCRPDGT 254



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 69/211 (32%), Gaps = 12/211 (5%)

Query: 242 MDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSN--ATER 296
             T  D   + I +   + +  P    +G +       D   A++I  +   +      R
Sbjct: 345 WLTHRDGPARTIADTPGVRVRLPVMLGSGGQVAYVTDADGEDAVEIAYLPRATGDREPRR 404

Query: 297 LTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           L +      +  +   +  +I   S       +   + +  +   + +       D  +S
Sbjct: 405 LASGRLGRVLEMAADSEGERIAIASHDGRLLLIDATEDSAGEVTELVRSVNGPVRDLSFS 464

Query: 356 PQGDLIAFTKFSGEKF--AIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           P G  + ++     +    I + +  D +   +       + P ++  GR L F   +  
Sbjct: 465 PDGHWLTWSHPGIGRSLRQIRMARIADRTIVDVTNGRFEDENPVFTRDGRYLAFLSWRGF 524

Query: 413 DTGSKLYSIDLN---GRNETLINTPAYASDP 440
           D    +++ DL+   G    L+   +    P
Sbjct: 525 DPVYDVHTGDLSFPLGCRPYLVPLSSATPSP 555



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 56/179 (31%), Gaps = 22/179 (12%)

Query: 166 ITGEKG----DFNSRILFVSESVVSGIIKNSLCVMDRDGAN---------------IRYL 206
           +T   G      ++  + V   V+ G       V D DG +                R L
Sbjct: 346 LTHRDGPARTIADTPGVRVRLPVMLGSGGQVAYVTDADGEDAVEIAYLPRATGDREPRRL 405

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
              R   + E       +++A A++D   +L +   +       + + +    +    FS
Sbjct: 406 ASGRLGRVLEMAADSEGERIAIASHD-GRLLLIDATEDSAGEVTELVRSVNGPVRDLSFS 464

Query: 267 SNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +G     S          I    +       +TN  F + +  ++ D   + F S R 
Sbjct: 465 PDGHWLTWSHPGIGRSLRQIRMARIADRTIVDVTNGRFEDENPVFTRDGRYLAFLSWRG 523



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 57/191 (29%), Gaps = 19/191 (9%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             A R+S +  R       +   ++YS         R T+        + S D  ++V++
Sbjct: 222 DGAARWSEDDGRVAFLSDHEGVGNLYSCRPDGTGLLRHTDHDAFYARHAAS-DGHRVVYQ 280

Query: 320 -----------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKF 366
                      +  +   +   ++  G    R +    A+      S    G   A    
Sbjct: 281 CGGDLWIVDDLTTPDSVPRKLEVRLGGPRAGRRTYQVPAAGHVGAISVDETGRASA-VNV 339

Query: 367 SGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL-YSIDLN 424
            G  +   +  +DG    +       ++ P    SG  + +    DG+   ++ Y     
Sbjct: 340 RGSLY--WLTHRDGPARTIADTPGVRVRLPVMLGSGGQVAYVTDADGEDAVEIAYLPRAT 397

Query: 425 GRNETLINTPA 435
           G  E       
Sbjct: 398 GDREPRRLASG 408



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 30/89 (33%), Gaps = 3/89 (3%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           L  S +  + +  FSP+   + ++       LR   M    DR    + N R     P F
Sbjct: 450 LVRSVNGPVRDLSFSPDGHWLTWSHPGIGRSLRQIRMARIADRTIVDVTNGRFEDENPVF 509

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           + +G+       +         D+ +   
Sbjct: 510 TRDGRYLAFLSWRGFDP---VYDVHTGDL 535


>gi|255531961|ref|YP_003092333.1| OmpA/MotB domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255344945|gb|ACU04271.1| OmpA/MotB domain protein [Pedobacter heparinus DSM 2366]
          Length = 631

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 83/268 (30%), Gaps = 46/268 (17%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGN----FRSMILAPRFSSN 268
            + P  + +  ++ ++   + +    V     +    P  + +     +    A   S +
Sbjct: 172 DYFPSVTADGTRLIFSRNINGNEDFFVSEKKDKSWSTPLPLSDKINTQKYNEGAQSISPD 231

Query: 269 GKRALISV----QKDEAMDIYSVDLQS---NATERLT---NTLFINISASYSPDSSQIVF 318
           G     +           DIY              L    NT +     + SPD S + F
Sbjct: 232 GLYLFFTGCNRPDGLGRCDIYVSHKNGKDWGEPFNLGAPVNTSYWESQPAISPDGSTLYF 291

Query: 319 ESDREGKEQLY-----VMQSNG--SDQKRISQDKEASY--FDPVWSPQGDLIAFTK---- 365
            S+R G    Y     +++++G  S  + +  +    Y    P   P G  + F+     
Sbjct: 292 VSNRPGGLGGYDIWKSMLKADGYWSQPENLGPEINTPYDEHTPFIHPDGKTLYFSSDGWP 351

Query: 366 -FSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TW--------SPSGRSLIFSRK-KDGD 413
               +   +  M + G          NL  P  T+        +P G   +FS   K G 
Sbjct: 352 GMGNKDIFMSRMNEAGK----WSSPENLGYPINTFNEETGLIVTPDGTYGLFSSNLKGGY 407

Query: 414 TGSKLY--SIDLNGRNETLINTPAYASD 439
               +Y   +  N +   +       +D
Sbjct: 408 GDMDIYQFKMPENKKPLPITYVKGIVTD 435



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 55/174 (31%), Gaps = 23/174 (13%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-----SRDQILFEPRFSPNQQKVAYAT 230
            + F   +   G+ +  + V  ++G +           +      +P  SP+   + + +
Sbjct: 234 YLFFTGCNRPDGLGRCDIYVSHKNGKDWGEPFNLGAPVNTSYWESQPAISPDGSTLYFVS 293

Query: 231 YDDE-----DILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKD--- 279
                    DI +  L        P+ +G   N       P    +GK    S       
Sbjct: 294 NRPGGLGGYDIWKSMLKADGYWSQPENLGPEINTPYDEHTPFIHPDGKTLYFSSDGWPGM 353

Query: 280 EAMDIY--SVDLQSN--ATERL---TNTLFINISASYSPDSSQIVFESDREGKE 326
              DI+   ++      + E L    NT         +PD +  +F S+ +G  
Sbjct: 354 GNKDIFMSRMNEAGKWSSPENLGYPINTFNEETGLIVTPDGTYGLFSSNLKGGY 407


>gi|291569180|dbj|BAI91452.1| serine/threonine protein kinase with WD-40 repeats [Arthrospira
           platensis NIES-39]
          Length = 677

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 74/216 (34%), Gaps = 23/216 (10%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    FSPN + +   + D         +        + I      + A  FS NG
Sbjct: 441 HSSWVRALAFSPNGEIMVSGSNDK-------TIRMWWGSRQRTIEGHTGSVHALVFSPNG 493

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            + L S  +D  + ++  D        +        + +++P  + +   S       + 
Sbjct: 494 -QILASASEDRTIILW--DTNGRRLSTILAHDLPVNALAFNPQGNVLASAS---ADASIR 547

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +   +GS ++        S     +SP G+ IA     G    + +   +   +  + E 
Sbjct: 548 LWNVSGSSRRLTITGHGDSINAIAYSPDGETIASASDDGT---VRLWNANTGAQLRVFEG 604

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               +++   +P G++LI      G     L++++ 
Sbjct: 605 HRGPVKSLVITPDGQTLI-----AGGDHIVLWNLNT 635



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 86/261 (32%), Gaps = 36/261 (13%)

Query: 182 ESVVSGIIKNSLCVMDRD----GANIRYLTPSRDQILFEP---RFSPNQQKVAYATYDDE 234
            + V G  +  L   +      G   R       + L        +P+ + +   T+   
Sbjct: 365 YTQVDGYRRYGLIPANPLLVIRGWPNRMWLLGHKEALGHVYALAIAPDGETLVAGTFGT- 423

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               +                  S + A  FS NG   ++S   D+ + ++      +  
Sbjct: 424 ----IRRWGIHSGEVVNPESVHSSWVRALAFSPNG-EIMVSGSNDKTIRMWW----GSRQ 474

Query: 295 ERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQ--DKEASYFD 351
             +        +  +SP+   +   S DR     + +  +NG   +R+S     +     
Sbjct: 475 RTIEGHTGSVHALVFSPNGQILASASEDRT----IILWDTNG---RRLSTILAHDLPVNA 527

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRK 409
             ++PQG+++A          I +    GS  RL +        A  +SP G ++  +  
Sbjct: 528 LAFNPQGNVLASASADAS---IRLWNVSGSSRRLTITGHGDSINAIAYSPDGETIASASD 584

Query: 410 KDGDTGSKLYSIDLNGRNETL 430
              D   +L++ +  G    +
Sbjct: 585 ---DGTVRLWNAN-TGAQLRV 601



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 43/132 (32%), Gaps = 14/132 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     S+ + +  G++ R         +    +SP+ + +A A+ D      V L +  
Sbjct: 539 SASADASIRLWNVSGSSRRLTITGHGDSINAIAYSPDGETIASASDDG----TVRLWNAN 594

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN- 304
                +     R  + +   + +G+  +          I   +L +     +T       
Sbjct: 595 TGAQLRVFEGHRGPVKSLVITPDGQTLIA-----GGDHIVLWNLNTGEI--ITTLWGHGD 647

Query: 305 --ISASYSPDSS 314
              + + +PD  
Sbjct: 648 LITALALTPDGK 659


>gi|282858153|ref|ZP_06267348.1| peptidase S9, prolyl oligopeptidase domain protein [Pyramidobacter
           piscolens W5455]
 gi|282584075|gb|EFB89448.1| peptidase S9, prolyl oligopeptidase domain protein [Pyramidobacter
           piscolens W5455]
          Length = 648

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 69/182 (37%), Gaps = 44/182 (24%)

Query: 261 LAPRFSSNGKRALI-----SVQKDEA-MDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             PR S +G  A+       ++KD    +++  D  +  + ++T     + +A ++PD  
Sbjct: 19  SCPRLSPDGSLAVYQVAQADLEKDGYDTNLWLYDCGAGRSRQVTFANA-DKTARWTPDGK 77

Query: 315 QIVFESDREGK-----EQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLI------- 361
            +VF S R+         LY ++  G + +R+       +   P+  P G ++       
Sbjct: 78  ALVFTSKRDASLEKDATALYRLELGGGEARRLGVVPLPVNDLWPL--PDGKILLSAVYTP 135

Query: 362 -----------AFTK----FSGEKF------AIGVMKKDGSQERLLVEDS-NLQAPTWSP 399
                       +T+     +G+ F      A+ +      + R L  D  ++   T SP
Sbjct: 136 EEPNPENAQYKVYTQIPFWQNGKNFTGQRRTALALWNPQSGELRRLTPDRMDVLDCTLSP 195

Query: 400 SG 401
            G
Sbjct: 196 GG 197



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 72/238 (30%), Gaps = 49/238 (20%)

Query: 217 PRFSPNQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           PR SP+     Y       ++D     L          R   F +     R++ +GK  +
Sbjct: 21  PRLSPDGSLAVYQVAQADLEKDGYDTNLWLYDCGAGRSRQVTFANADKTARWTPDGKALV 80

Query: 274 ISVQKD-----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----------- 317
            + ++D     +A  +Y ++L      RL             PD   ++           
Sbjct: 81  FTSKRDASLEKDATALYRLELGGGEARRLGVVPLPVNDLWPLPDGKILLSAVYTPEEPNP 140

Query: 318 -------------------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                              F   R  +  L +      + +R++ D+     D   SP G
Sbjct: 141 ENAQYKVYTQIPFWQNGKNFTGQR--RTALALWNPQSGELRRLTPDR-MDVLDCTLSPGG 197

Query: 359 D---LIA--FTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRK 409
               L+A  + K       +  +  +      L E    + +   WS  GR ++ +  
Sbjct: 198 GAALLVAEEYEKVKPLCSHVWRLDLESGAMDCLSEGLEYSFKTAGWSG-GRVIVVASD 254



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 9/92 (9%)

Query: 350 FDPVWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             P  SP G L  +       +  G    + +      + R +   +  +   W+P G++
Sbjct: 19  SCPRLSPDGSLAVYQVAQADLEKDGYDTNLWLYDCGAGRSRQVTFANADKTARWTPDGKA 78

Query: 404 LIFSRKKDGDT---GSKLYSIDLNGRNETLIN 432
           L+F+ K+D       + LY ++L G     + 
Sbjct: 79  LVFTSKRDASLEKDATALYRLELGGGEARRLG 110


>gi|256751903|ref|ZP_05492774.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749208|gb|EEU62241.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermoanaerobacter ethanolicus CCSD1]
          Length = 597

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 64/206 (31%), Gaps = 12/206 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--ISVQ 277
           SP+  K+   + +      ++ +D      P  + +        +F   G+  L      
Sbjct: 24  SPDDSKLV-MSANLNGAFNLWAIDLETSYYPYPLTSIGQSTSFIKFDPKGRYILAGFDKD 82

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSP---DSSQIVFESDREGKEQL--YVMQ 332
            DE   IY++ L       L           +S        + + S +E    L  YV  
Sbjct: 83  GDENYKIYALPLIGGELTPLFEESKDQDKYYFSHLNEKGKLLYYVSSKENPTYLNGYVYD 142

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                ++R+ +  E + +    S         K     +A+ ++  +     L+ +   +
Sbjct: 143 IEKKQERRLYEGSEGATYLAAVSDDDTRFVIIKGFANTYAVAMVMTETETLPLVPDPQKI 202

Query: 393 QAPTWSP---SGRSLIFSRKKDGDTG 415
                SP      ++ F    + D  
Sbjct: 203 HITR-SPLFVDKDTIYFLTDYESDFT 227



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 56/133 (42%), Gaps = 7/133 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIV--FESD 321
            S +  + ++S   + A +++++DL+++     LT+         + P    I+  F+ D
Sbjct: 23  VSPDDSKLVMSANLNGAFNLWAIDLETSYYPYPLTSIGQSTSFIKFDPKGRYILAGFDKD 82

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFSGEKFAI--GVMK 377
            +   ++Y +   G +   + ++ +    Y+    + +G L+ +         +   V  
Sbjct: 83  GDENYKIYALPLIGGELTPLFEESKDQDKYYFSHLNEKGKLLYYVSSKENPTYLNGYVYD 142

Query: 378 KDGSQERLLVEDS 390
            +  QER L E S
Sbjct: 143 IEKKQERRLYEGS 155



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 2/87 (2%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP    +  +      F +  +  + S     L     +     + P GR ++    KDG
Sbjct: 24  SPDDSKLVMSANLNGAFNLWAIDLETSYYPYPLTSIGQSTSFIKFDPKGRYILAGFDKDG 83

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASD 439
           D   K+Y++ L G   T +   +   D
Sbjct: 84  DENYKIYALPLIGGELTPLFEESKDQD 110


>gi|167038626|ref|YP_001666204.1| peptidase S9 prolyl oligopeptidase [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167040964|ref|YP_001663949.1| peptidase S9 prolyl oligopeptidase [Thermoanaerobacter sp. X514]
 gi|300913825|ref|ZP_07131142.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermoanaerobacter sp. X561]
 gi|307725489|ref|YP_003905240.1| peptidase S9 prolyl oligopeptidase [Thermoanaerobacter sp. X513]
 gi|320117018|ref|YP_004187177.1| peptidase S9 prolyl oligopeptidase [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166855204|gb|ABY93613.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Thermoanaerobacter sp. X514]
 gi|166857460|gb|ABY95868.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|300890510|gb|EFK85655.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermoanaerobacter sp. X561]
 gi|307582550|gb|ADN55949.1| peptidase S9 prolyl oligopeptidase [Thermoanaerobacter sp. X513]
 gi|319930109|gb|ADV80794.1| peptidase S9 prolyl oligopeptidase [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 597

 Score = 63.9 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 64/206 (31%), Gaps = 12/206 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--ISVQ 277
           SP+  K+   + +      ++ +D      P  + +        +F   G+  L      
Sbjct: 24  SPDDSKLV-MSANLNGAFNLWAIDLETSYYPYPLTSIGQSTSFIKFDPKGRYILAGFDKD 82

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSP---DSSQIVFESDREGKEQL--YVMQ 332
            DE   IY++ L       L           +S        + + S +E    L  YV  
Sbjct: 83  GDENYKIYALPLIGGELTPLFEESKDQDKYYFSHLNEKGKLLYYVSSKENPTYLNGYVYD 142

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                ++R+ +  E + +    S         K     +A+ ++  +     L+ +   +
Sbjct: 143 IEKKQERRLYEGSEGATYLAAVSDDDTRFVIIKGFANTYAVAMVMTETETLPLVPDPQKI 202

Query: 393 QAPTWSP---SGRSLIFSRKKDGDTG 415
                SP      ++ F    + D  
Sbjct: 203 HITR-SPLFVDKDTIYFLTDYESDFT 227



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 56/133 (42%), Gaps = 7/133 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIV--FESD 321
            S +  + ++S   + A +++++DL+++     LT+         + P    I+  F+ D
Sbjct: 23  VSPDDSKLVMSANLNGAFNLWAIDLETSYYPYPLTSIGQSTSFIKFDPKGRYILAGFDKD 82

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFSGEKFAI--GVMK 377
            +   ++Y +   G +   + ++ +    Y+    + +G L+ +         +   V  
Sbjct: 83  GDENYKIYALPLIGGELTPLFEESKDQDKYYFSHLNEKGKLLYYVSSKENPTYLNGYVYD 142

Query: 378 KDGSQERLLVEDS 390
            +  QER L E S
Sbjct: 143 IEKKQERRLYEGS 155



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 2/87 (2%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP    +  +      F +  +  + S     L     +     + P GR ++    KDG
Sbjct: 24  SPDDSKLVMSANLNGAFNLWAIDLETSYYPYPLTSIGQSTSFIKFDPKGRYILAGFDKDG 83

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASD 439
           D   K+Y++ L G   T +   +   D
Sbjct: 84  DENYKIYALPLIGGELTPLFEESKDQD 110


>gi|327537716|gb|EGF24423.1| secreted protein containing planctomycete cytochrome C domain
           [Rhodopirellula baltica WH47]
          Length = 1525

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 74/220 (33%), Gaps = 19/220 (8%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D D + +  L  S + +   P+                 I +    D+     P+   + 
Sbjct: 107 DADSSYLISLITSHEGVAEMPKAPRKPLHETEVDTIRRWIEQGAKNDSPETSGPRFDADQ 166

Query: 257 RSMILAP------RFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASY 309
             +   P        S + +   I+       +I  +D +S     RL        S  +
Sbjct: 167 PPVYAGPPTLPSIDLSPDEQTLAIA----GYHEICLLDAKSGEMQTRLVGISPRINSVRF 222

Query: 310 SPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD S+I       G+  +L +  ++  + +   Q    +     WSP G  IA      
Sbjct: 223 SPDGSRIAAAGGMPGELGELQIWNASTGELELSRQITYDTITGLSWSPDGSKIAIGANDN 282

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLI 405
              A+       + E++L + ++        ++P G+ L+
Sbjct: 283 TVRAL----DSATGEQVLFQGAHEDWIRDTVFTPDGKHLV 318



 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP++Q +A A Y +     + L+D +      R+      I + RFS +G R   +    
Sbjct: 182 SPDEQTLAIAGYHE-----ICLLDAKSGEMQTRLVGISPRINSVRFSPDGSRIAAAGGMP 236

Query: 280 EAMDIYSV-DLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +    + +  +       ++T         S+SPD S+I   ++      +  + S  
Sbjct: 237 GELGELQIWNASTGELELSRQITYDT--ITGLSWSPDGSKIAIGAN---DNTVRALDSAT 291

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +Q       E    D V++P G  +      
Sbjct: 292 GEQVLFQGAHEDWIRDTVFTPDGKHLVSVARD 323



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 80/263 (30%), Gaps = 48/263 (18%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +C++D     ++         +   RFSP+  ++A A     ++  + + +        
Sbjct: 195 EICLLDAKSGEMQTRLVGISPRINSVRFSPDGSRIAAAGGMPGELGELQIWNASTGELEL 254

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
                   I    +S +G +  I    +    + ++D  +   + L      +      +
Sbjct: 255 SRQITYDTITGLSWSPDGSKIAIGANDN---TVRALDSATG-EQVLFQGAHEDWIRDTVF 310

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWS---------- 355
           +PD   +V  +      +    +    + +R    ++     +    + S          
Sbjct: 311 TPDGKHLVSVA------RDMTCKLTEVETERFIDNVTSITPGALSGGLSSVAMHPSRDEI 364

Query: 356 ----PQGDLIAFTKFSGEKFAIG--------VMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                 G    +  F   K  IG        + + +G   +++V  +          G  
Sbjct: 365 VVGGSDGVTKVYRVFRQTKRQIGDDANLVRNLPRLNGRIRQVVVNSA----------GTH 414

Query: 404 LIFSRKKDGDTGSKLYSIDLNGR 426
           L      DG +  +++  D  G 
Sbjct: 415 LAAVATIDGHSELRVWKYDFTGE 437


>gi|170117220|ref|XP_001889798.1| WD-40 repeat-containing protein [Laccaria bicolor S238N-H82]
 gi|164635264|gb|EDQ99574.1| WD-40 repeat-containing protein [Laccaria bicolor S238N-H82]
          Length = 915

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 77/226 (34%), Gaps = 13/226 (5%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D  +   L       +   RFS +  +V    YDD     V + +         +    
Sbjct: 679 SDLWDPAELIMQNGSWVLSVRFSQDGSRVVSGLYDD----TVRIWNVMTGEVEAELKGHT 734

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             + +  FS +G R ++S   D+ + I++V +       L        S ++S D S++V
Sbjct: 735 DWVNSVAFSQDGSR-VVSGSDDKMVRIWNV-MTGEVEAELKGHTDWVNSVTFSQDGSRVV 792

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             SD    + + +      + +   +          +S  G  +  +    +   I  + 
Sbjct: 793 SGSD---DKMVRIWNVMTGEVEAELKGHTDCVNSVTFSQDGSRVV-SGSKDKMVRIWNVM 848

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               +  L      +++  +S  G  ++       D   +++++  
Sbjct: 849 TGEVEAELKGHTGGVKSVAFSQDGSRVV---SGSEDKTVRIWNVTT 891



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 93/270 (34%), Gaps = 13/270 (4%)

Query: 136 RKQIIGKKFFSSPASWRKIAHTISD-DIYQSITGEKGDFNSRILFVSE--SVVSGIIKNS 192
           +   I K + ++ +   K+   +SD      +  + G +   + F  +   VVSG+  ++
Sbjct: 656 QNSSIRKTYTANVSRVPKVTLGLSDLWDPAELIMQNGSWVLSVRFSQDGSRVVSGLYDDT 715

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + +     +          +    FS +  +V   + D      V + +         
Sbjct: 716 VRIWNVMTGEVEAELKGHTDWVNSVAFSQDGSRVVSGSDDK----MVRIWNVMTGEVEAE 771

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      + +  FS +G R ++S   D+ + I++V +       L        S ++S D
Sbjct: 772 LKGHTDWVNSVTFSQDGSR-VVSGSDDKMVRIWNV-MTGEVEAELKGHTDCVNSVTFSQD 829

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            S++V  S     + + +      + +   +          +S  G  +  +    +   
Sbjct: 830 GSRVVSGSK---DKMVRIWNVMTGEVEAELKGHTGGVKSVAFSQDGSRVV-SGSEDKTVR 885

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           I  +     +  L     ++ +  +S  G 
Sbjct: 886 IWNVTTGEVEAELKGHTYSVNSVAFSQDGS 915



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 76/205 (37%), Gaps = 12/205 (5%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           + P    +   Y   +   + +V L  + +    + I    S +L+ RFS +G R ++S 
Sbjct: 653 WIPQNSSIRKTYTA-NVSRVPKVTLGLSDLWDPAELIMQNGSWVLSVRFSQDGSR-VVSG 710

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D+ + I++V +       L        S ++S D S++V  SD    + + +      
Sbjct: 711 LYDDTVRIWNV-MTGEVEAELKGHTDWVNSVAFSQDGSRVVSGSD---DKMVRIWNVMTG 766

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           + +   +          +S  G  +  +    +   I  +     +  L      + + T
Sbjct: 767 EVEAELKGHTDWVNSVTFSQDGSRVV-SGSDDKMVRIWNVMTGEVEAELKGHTDCVNSVT 825

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
           +S  G  ++       D   +++++
Sbjct: 826 FSQDGSRVV---SGSKDKMVRIWNV 847


>gi|119470806|ref|ZP_01613417.1| N-terminal winged-HTH domain fused to TolB-like domain
           [Alteromonadales bacterium TW-7]
 gi|119446033|gb|EAW27312.1| N-terminal winged-HTH domain fused to TolB-like domain
           [Alteromonadales bacterium TW-7]
          Length = 622

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 58/283 (20%), Positives = 104/283 (36%), Gaps = 48/283 (16%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           D +        K    PA++R++ +T  D    S    K   ++ I F+ +         
Sbjct: 172 DTQTLGYFTLDKLTLQPANYREV-YTFKDFTVTS-QQLKWASDNHIYFIEKRQSDN--HT 227

Query: 192 SLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            L  +D      R +  S  Q  +     SP+QQ +A A    ++  RV L+D +     
Sbjct: 228 QLSAIDLTTQEKRVIKSSAGQDWMKLQALSPSQQSIALAYEAGQNKYRVDLLDIKTST-T 286

Query: 251 KRIGNFRSMILAPRFSSNGKRAL-------------------------------ISVQKD 279
           K +      +    +  + ++ L                                S+  +
Sbjct: 287 KTLAIVEDSVQGLSWHPDEQQLLISNKHELQLLNLQGQLKKLAFNNYHIIRDAHFSLSGN 346

Query: 280 EAM-DIYSVDLQ-SNATER-------LTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           + + ++  +D+  + +T +       L +T  I+    YSPDSS+ VFES R G +QL++
Sbjct: 347 DILMELVKIDVDITRSTRQAPTQFETLVDTSSIDFLPVYSPDSSKFVFESHRFGTKQLFL 406

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            + N +     S       F  VWS  G+ +  T      F I
Sbjct: 407 YE-NSTQTLIFSNPDNEELFGIVWSKNGEEVI-TASKNTLFRI 447



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 51/133 (38%), Gaps = 10/133 (7%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           +   + F    +  + +++       + R++Q K+++Y    WS     I F      + 
Sbjct: 117 NGEYVAFVRGDKSNQAIWLKNLRSGKEIRLTQ-KQSTYHSLGWSSDDSEIVFVHQQDTQT 175

Query: 371 ---FAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              F +  +    +  R +    +    +    W+     + F  K+  D  ++L +IDL
Sbjct: 176 LGYFTLDKLTLQPANYREVYTFKDFTVTSQQLKWASD-NHIYFIEKRQSDNHTQLSAIDL 234

Query: 424 NGRNETLINTPAY 436
             + + +I + A 
Sbjct: 235 TTQEKRVIKSSAG 247



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 88/252 (34%), Gaps = 12/252 (4%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATY 231
           +S I+FV +     +   +L  +    AN R +   +D  +     +++ +   + +   
Sbjct: 162 DSEIVFVHQQDTQTLGYFTLDKLTLQPANYREVYTFKDFTVTSQQLKWASD-NHIYFIEK 220

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDEA-MDIYSVD 288
              D            +  + I +            S + +   ++ +  +    +  +D
Sbjct: 221 RQSDNHTQLSAIDLTTQEKRVIKSSAGQDWMKLQALSPSQQSIALAYEAGQNKYRVDLLD 280

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           ++++ T+ L          S+ PD  Q++        +    + +     K+++ +    
Sbjct: 281 IKTSTTKTLAIVEDSVQGLSWHPDEQQLLIS-----NKHELQLLNLQGQLKKLAFNNYHI 335

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFS 407
             D  +S  G+ I       +       ++  +Q   LV+ S++   P +SP     +F 
Sbjct: 336 IRDAHFSLSGNDILMELVKIDVDITRSTRQAPTQFETLVDTSSIDFLPVYSPDSSKFVFE 395

Query: 408 RKKDGDTGSKLY 419
             + G     LY
Sbjct: 396 SHRFGTKQLFLY 407



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 16/167 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE---- 323
           NG+             I+  +L+S    RLT       S  +S D S+IVF   ++    
Sbjct: 117 NGEYVAFVRGDKSNQAIWLKNLRSGKEIRLTQKQSTYHSLGWSSDDSEIVFVHQQDTQTL 176

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFT--KFSGEKFAIGVMKKD 379
           G   L  +    ++ + +   K+ +       W+   + I F   + S     +  +   
Sbjct: 177 GYFTLDKLTLQPANYREVYTFKDFTVTSQQLKWASD-NHIYFIEKRQSDNHTQLSAIDLT 235

Query: 380 GSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             ++R++   +          SPS +S+  +     + G   Y +DL
Sbjct: 236 TQEKRVIKSSAGQDWMKLQALSPSQQSIALAY----EAGQNKYRVDL 278



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 83/204 (40%), Gaps = 17/204 (8%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD- 279
            N + VA+   D +    ++L + R  +   R+   +S   +  +SS+    +   Q+D 
Sbjct: 116 HNGEYVAFVRGD-KSNQAIWLKNLRSGKEI-RLTQKQSTYHSLGWSSDDSEIVFVHQQDT 173

Query: 280 EAMDIYSVDLQS----NATERLTNTLFINIS--ASYSPDSSQIVFESDR--EGKEQLYVM 331
           + +  +++D  +    N  E  T   F   S    ++ D + I F   R  +   QL  +
Sbjct: 174 QTLGYFTLDKLTLQPANYREVYTFKDFTVTSQQLKWASD-NHIYFIEKRQSDNHTQLSAI 232

Query: 332 QSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLL--V 387
                +++ I       +      SP    IA    +G  K+ + ++    S  + L  V
Sbjct: 233 DLTTQEKRVIKSSAGQDWMKLQALSPSQQSIALAYEAGQNKYRVDLLDIKTSTTKTLAIV 292

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKD 411
           EDS +Q  +W P  + L+ S K +
Sbjct: 293 EDS-VQGLSWHPDEQQLLISNKHE 315


>gi|21229128|ref|NP_635050.1| hypothetical protein MM_3026 [Methanosarcina mazei Go1]
 gi|20907688|gb|AAM32722.1| hypothetical protein MM_3026 [Methanosarcina mazei Go1]
          Length = 515

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 71/225 (31%), Gaps = 16/225 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +P+ +KV  A     +I  +      +        N R +      S +G +  +   
Sbjct: 126 AVAPDGKKVYVANMGSNNISVIDTATNSVTDTIDAGINPRGI----AVSPDGTKIYVVNS 181

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-S 336
               +    +D  +N          I    + +PD +++   +   G E   V   +  S
Sbjct: 182 ASNNVS--VIDTVTNNVTASVTAGGIPYGVAVNPDGTKVYVTNGDIGNENNTVSVIDTIS 239

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +    +       +    +P G  +    +      + V+    +     V  +     T
Sbjct: 240 NNVTATVTAGGIPYGVAVTPDGTKVYVANW--GSDNVSVIDTTSNNITARVNITKPIGIT 297

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            SP G+ +  +     +  + L  ID    N T+  T    SDP 
Sbjct: 298 VSPDGKKVYVT-----NVSNNLSVIDT--ANNTVTATVNVGSDPS 335



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 78/251 (31%), Gaps = 19/251 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L +++RDG  +       ++  +   ++ N  KV   T   E      +    I   P+ 
Sbjct: 16  LILLNRDGNKLVTFKDYNNEDFWTEWYTGNTIKVKLETNRYETAYGFKIDQVEIRTNPES 75

Query: 253 IG----NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           I        S   AP            +    + ++  +D  +N    + +        +
Sbjct: 76  ISMDIKETPSSSSAP---------FAYITNGGSNNVSVIDTVNNTVIAVVDVGSDPFGVA 126

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +PD  + V+ ++  G   + V+ +  +     + D   +      SP G  I     + 
Sbjct: 127 VAPDGKK-VYVANM-GSNNISVIDTATNSVTD-TIDAGINPRGIAVSPDGTKIYVVNSAS 183

Query: 369 EKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               + V+    +     +           +P G  +  +    G+  + +  ID    N
Sbjct: 184 NN--VSVIDTVTNNVTASVTAGGIPYGVAVNPDGTKVYVTNGDIGNENNTVSVIDTISNN 241

Query: 428 ETLINTPAYAS 438
            T   T     
Sbjct: 242 VTATVTAGGIP 252


>gi|332664022|ref|YP_004446810.1| peptidase C14 caspase catalytic subunit p20 [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332332836|gb|AEE49937.1| peptidase C14 caspase catalytic subunit p20 [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 1210

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 86/257 (33%), Gaps = 22/257 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + + ++ G  +  L       +    FSP+ QK+    Y+ +    V L D R
Sbjct: 172 AGDYGGIIRIFNQAGELLNTLDGHGQYAINALAFSPDGQKILSGGYNYK----VRLWDWR 227

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            ++  K I   R++I    FS +G     +   +  + ++  D Q N  ++       ++
Sbjct: 228 NNKVIKEIDQHRTVISTVAFSPDGAYLATAGSSENDVFLW--DKQGNLLQKFQEDRINDL 285

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAF 363
              ++PD   ++        +       NG      S D     S     ++P    I  
Sbjct: 286 D--FTPDGKALLMA---PWSKSAKSYDLNGQHINSYSNDASPVTSVGFSPFAPDSIFIV- 339

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSID 422
               G    I +      + +  +   +   P  ++P      +      ++G  LY  D
Sbjct: 340 --TGGNGTHIRLWDAVSGEVQGFLNQKDFNTPVAFNP-----QYPSVMLAESGDSLYHYD 392

Query: 423 LNGRNETLINTPAYASD 439
           L       I   A  S 
Sbjct: 393 LYSDEHIAIEKSAQVSH 409



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/244 (18%), Positives = 87/244 (35%), Gaps = 25/244 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
               I+ E   SP+ +   Y            L+ T   +  K +   ++ +    FS++
Sbjct: 29  GHSYIVSEVAISPDGK---YVLTAGGYPDNTVLLWTEGGQLLKILDGHQNNVSDAEFSAD 85

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           GK       K   ++++  D Q     +L     ++I A      SQ V   D +G   +
Sbjct: 86  GKYIFTLESKTRTLNLW--DNQGKKLRKL---PDLDILAVCFSTDSQHVLGGDFDGN--I 138

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                NG   + I +  +      + S  G  +A   + G    I +  + G     L  
Sbjct: 139 KRFDLNGKLVQTI-KASDREINKVICSKDGRYLAAGDYGG---IIRIFNQAGELLNTLDG 194

Query: 389 DSN--LQAPTWSPSGRSLIFSRKK------DGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                + A  +SP G+ ++           D      +  ID   ++ T+I+T A++ D 
Sbjct: 195 HGQYAINALAFSPDGQKILSGGYNYKVRLWDWRNNKVIKEID---QHRTVISTVAFSPDG 251

Query: 441 QWVG 444
            ++ 
Sbjct: 252 AYLA 255



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 88/273 (32%), Gaps = 38/273 (13%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           DFN+ + F  +     + ++   +   D  +  ++   +   +       N     +   
Sbjct: 365 DFNTPVAFNPQYPSVMLAESGDSLYHYDLYSDEHIAIEKSAQVSHSSLVYNFAGDHFLIS 424

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---- 287
           +    ++++    +            + + +  FS +G+  L +  +    ++  +    
Sbjct: 425 NFSGGIQLWREGDQEWEEIWENQLDSNQVTSLNFSPDGQYFLTATNRHWVPEVLKIIPEK 484

Query: 288 -----DLQS--NATERL---TNTLFINIS---ASYSPDSSQIV-------FESDREGKEQ 327
                + Q       R+   T       S   A +SPD   +           +R+   +
Sbjct: 485 RDQPYNQQGFPAVLRRVDDFTTVQQYGSSADKAVFSPDGKYVATNETYGLSVYNRQTARE 544

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL- 386
           L+ +   G+    I+           +SP    +     S     I      G   R   
Sbjct: 545 LFHISDAGNGVFEIAT-------CLAFSPNSQSVVVGFTSN---VIRQYNLQGKLIRQYE 594

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
              S ++A ++SPSG+ LI       D  +K++
Sbjct: 595 GHLSAIRAVSFSPSGQFLI---SGSNDNTAKIW 624


>gi|325103802|ref|YP_004273456.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
 gi|324972650|gb|ADY51634.1| OmpA/MotB domain protein [Pedobacter saltans DSM 12145]
          Length = 633

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 75/240 (31%), Gaps = 40/240 (16%)

Query: 222 NQQKVAYATY--DDEDILRVYLMDTRID---RAPKRIGNFRSMILAPRFSSNGKRALISV 276
           + + + +     ++ED  +    +          + I   R    A   S +G+    + 
Sbjct: 182 DGETIIFTRQINNNEDFYKSVKKNGEWQVSQYLSENINTPRYNEGAQCISPDGRFLFFTG 241

Query: 277 ----QKDEAMDIYSVDLQS---NATERL---TNTLFINISASYSPDSSQIVFESDREGK- 325
                     DIY  + +    +    L    NT       S S D   + F SDR G  
Sbjct: 242 CNRPDGMGRCDIYVSEKEGDNWSKPVNLGAPINTGGWESQPSLSADGRTLYFVSDRPGGL 301

Query: 326 --EQLYVMQSNGSD--QKRI----SQDKEASYFDPVWSPQGDLIAFTKF---SGEKFAIG 374
               ++  + +     QK I    + +       P   P  + + F+           + 
Sbjct: 302 GSYDIWASKLDDDAKWQKPINLGPTINTPFDEQSPFIHPDNETLYFSSNGWPGLGNKDLF 361

Query: 375 VMKKDGSQERLLVEDSNLQAP----------TWSPSGRSLIFSR-KKDGDTGSKLYSIDL 423
           + +KD S    +   +NL  P          + S  G    FS     G  G  +Y+ DL
Sbjct: 362 ISRKDESGNWKI--PANLGFPINSYGEETGLSISSDGTKAFFSSNNYKGLGGFDIYAFDL 419



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 58/195 (29%), Gaps = 29/195 (14%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-----SRDQILFEPRF 219
                 G F   + F   +   G+ +  + V +++G N           +      +P  
Sbjct: 228 QCISPDGRF---LFFTGCNRPDGMGRCDIYVSEKEGDNWSKPVNLGAPINTGGWESQPSL 284

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRA---PKRIGNFRSMIL-----APRFSSNGKR 271
           S + + + + +     +    +  +++D      K I    ++       +P    + + 
Sbjct: 285 SADGRTLYFVSDRPGGLGSYDIWASKLDDDAKWQKPINLGPTINTPFDEQSPFIHPDNET 344

Query: 272 ALISVQKD---EAMDIYSVDLQSNATERL-------TNTLFINISASYSPDSSQIVFESD 321
              S          D++      +   ++        N+       S S D ++  F S+
Sbjct: 345 LYFSSNGWPGLGNKDLFISRKDESGNWKIPANLGFPINSYGEETGLSISSDGTKAFFSSN 404

Query: 322 RE---GKEQLYVMQS 333
                G   +Y    
Sbjct: 405 NYKGLGGFDIYAFDL 419


>gi|255609227|ref|XP_002539019.1| dipeptidyl peptidase IV, putative [Ricinus communis]
 gi|223509215|gb|EEF23364.1| dipeptidyl peptidase IV, putative [Ricinus communis]
          Length = 320

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 47/318 (14%), Positives = 103/318 (32%), Gaps = 96/318 (30%)

Query: 200 GANIRYLTPSRDQILFEPR----------FSPNQQKVAYATYDDEDILRVYLMDT----- 244
           GAN      + D+I  +P            SP+  +V +    D++  ++ L +      
Sbjct: 13  GANASAEKLTLDRIHSDPSLSGPGVRSLKVSPDGARVTFLRGRDDNQFQLDLWEYNLKDK 72

Query: 245 ---------------------RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
                                +  R   R  + + + L+  +S +GKR L+ +  +    
Sbjct: 73  STHRLVDSKVLVPEENLSDAEKARRERARTASLKGI-LSYSWSPDGKRLLVPIAGN---- 127

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +Y VD+      R+  +    +    SP    + F  D    + L+V+      +K+++ 
Sbjct: 128 LYLVDVARPDAARMVAS-GNVLDPKISPQGRYVSFVRD----QNLFVIDLTTGKEKQLTT 182

Query: 344 DKEASYFD----------------PVWSPQGDLIAFTKFSG------EKFAIG------- 374
           D + +  +                  W+P    IA+ ++         +F I        
Sbjct: 183 DGKGTIHNAEAEFVAQEEMGQTTGYYWAPDDSAIAYKRYDEAPVPVVRRFEIFADRTEVV 242

Query: 375 -----------------VMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGD 413
                            ++  +    R +    N         WS + ++L+F R+    
Sbjct: 243 EQRYPAAGDPNVLVELKIVSPETGAIRDVALGDNKDIYLVRADWSANSKALLFQRQTRDQ 302

Query: 414 TGSKLYSIDLNGRNETLI 431
              +L S+D     + ++
Sbjct: 303 KKLELVSVDAATLAQKVL 320



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 63/174 (36%), Gaps = 34/174 (19%)

Query: 265 FSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            S +G R      +D+    +D++  +L+  +T RL              DS  +V    
Sbjct: 42  VSPDGARVTFLRGRDDNQFQLDLWEYNLKDKSTHRLV-------------DSKVLV---- 84

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                +  +  +  + ++R             WSP G  +     +G  + + V + D  
Sbjct: 85  ----PEENLSDAEKARRERARTASLKGILSYSWSPDGKRLL-VPIAGNLYLVDVARPD-- 137

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
               +V   N+  P  SP GR + F R ++      L+ IDL    E  + T  
Sbjct: 138 -AARMVASGNVLDPKISPQGRYVSFVRDQN------LFVIDLTTGKEKQLTTDG 184


>gi|77361302|ref|YP_340877.1| dipeptidyl peptidase IV [Pseudoalteromonas haloplanktis TAC125]
 gi|76876213|emb|CAI87435.1| Dipeptidyl peptidase IV [Pseudoalteromonas haloplanktis TAC125]
          Length = 741

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 49/191 (25%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAP------------- 263
           +FSP+  +V Y     +D  R  L +  +     R + +   +   P             
Sbjct: 46  KFSPDGNRVTYLQGKSDDYNRYDLWEYNLKDNTNRMLVDSAKLFSGPENLSDEEKARRER 105

Query: 264 -----------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                      ++S +GK  L  +  D    +Y  +L +N +++LTNT      A +SP 
Sbjct: 106 QRIFGQGILEYKWSKDGKALLFPLNGD----LYYYELAANKSKKLTNTEAFETDARFSPK 161

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA----------------SYFDPVWSP 356
            + + F  +    + LY +  +   + ++S D                         W+ 
Sbjct: 162 GNFVSFIRE----QNLYALALDSGKEIQLSNDGGGIIKNGMAEFVAQEEMSRMTGYWWAD 217

Query: 357 QGDLIAFTKFS 367
               IAFT+  
Sbjct: 218 DESKIAFTRVD 228



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 35/177 (19%)

Query: 265 FSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           FS +G R              D++  +L+ N    L +              S  +F   
Sbjct: 47  FSPDGNRVTYLQGKSDDYNRYDLWEYNLKDNTNRMLVD--------------SAKLF--- 89

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G E L   +    +++RI         +  WS  G  + F         +   +   +
Sbjct: 90  -SGPENLSDEEKARRERQRIFGQG---ILEYKWSKDGKALLF----PLNGDLYYYELAAN 141

Query: 382 QERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           + + L      +    +SP G  + F R+++      LY++ L+   E  ++     
Sbjct: 142 KSKKLTNTEAFETDARFSPKGNFVSFIREQN------LYALALDSGKEIQLSNDGGG 192



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/100 (15%), Positives = 36/100 (36%), Gaps = 3/100 (3%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +  D    V+ S+R+G + LY+ ++NG   ++I+  + A         +  L+ F+    
Sbjct: 343 FLKDKKHFVWASERDGFKHLYLYRTNGQLVRQITNGEWAVDGLKGIDEKKGLVYFSGRKD 402

Query: 369 EKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLI 405
                 +           + + E         +   ++ I
Sbjct: 403 TPLESHLYSASLFKKGDIKRITEQGQYHDVVLAKDNKTFI 442



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 72/206 (34%), Gaps = 32/206 (15%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR- 218
           ++IY     E   FN R  F      +  +K  L V+  +   + ++   +D+ ++  R 
Sbjct: 238 NEIYA---DEVKLFNQRYPF----TGTNNVKIQLGVVTLNNQQVDWVDLGKDEDIYLARA 290

Query: 219 -FSPNQQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRA 272
            +  +   ++Y   +       LR Y   T+  +      +   + L     F  + K  
Sbjct: 291 KWLKDSNTLSYQWQNRSQQTLELRFYNSKTKSQKVALTESSDTWINLHFDLEFLKDKKHF 350

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS-------SQIVFESDREGK 325
           + + ++D    +Y          ++TN         ++ D          +V+ S R+  
Sbjct: 351 VWASERDGFKHLYLYRTNGQLVRQITNGE-------WAVDGLKGIDEKKGLVYFSGRKDT 403

Query: 326 E---QLYVMQS-NGSDQKRISQDKEA 347
                LY        D KRI++  + 
Sbjct: 404 PLESHLYSASLFKKGDIKRITEQGQY 429


>gi|116625318|ref|YP_827474.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228480|gb|ABJ87189.1| serine/threonine protein kinase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 847

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 74/230 (32%), Gaps = 14/230 (6%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PR SP+ Q +A+  +         +     D A          +    +S++G R     
Sbjct: 331 PRLSPDGQTLAFTPFVSGVTQVAVMTPASGDIAVLTHATAEGSVEQVSWSADGTRLYFDR 390

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D    +YSV       + L              D S +V   +   K Q++   ++  
Sbjct: 391 LTDVPRGVYSVPKLGGKEQLLLEDASN---PEALADGSLLVTRLNAARKHQIFRFWTDSG 447

Query: 337 --DQKRISQDKEASYFDPVWSPQGDL-IAF---TKFSGEKFAIGVMKKDGSQERLL---- 386
             +   +              P G   +A+      +G   A+  ++      RLL    
Sbjct: 448 RVEALPVLLKMVGDRSIVRAFPDGKSAVAYGTPANAAGSSPALYRIEIGSGAVRLLDPGP 507

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPA 435
            E + +     +  G+ ++F+  +      K    D NG   E L+ T A
Sbjct: 508 PEGAEVGGLAVTRDGKRVLFATSRRSAYTVKSIPADGNGPSPEVLLLTGA 557



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 12/183 (6%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQ 315
           S    PR S +G+    +        +  +   S     LT+          S+S D ++
Sbjct: 326 SAASCPRLSPDGQTLAFTPFVSGVTQVAVMTPASGDIAVLTHATAEGSVEQVSWSADGTR 385

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + F+   +    +Y +   G  ++ + +D      +P     G L+     +  K  I  
Sbjct: 386 LYFDRLTDVPRGVYSVPKLGGKEQLLLED----ASNPEALADGSLLVTRLNAARKHQIFR 441

Query: 376 MKKDGSQ----ERLLVEDSNLQAPTWSPSGRS-LIFSRKKD-GDTGSKLYSIDLNGRNET 429
              D  +      LL    +       P G+S + +    +   +   LY I++      
Sbjct: 442 FWTDSGRVEALPVLLKMVGDRSIVRAFPDGKSAVAYGTPANAAGSSPALYRIEIGSGAVR 501

Query: 430 LIN 432
           L++
Sbjct: 502 LLD 504



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 61/187 (32%), Gaps = 17/187 (9%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +      ++ +      R  +RI      I A   + +G+    +        ++ + 
Sbjct: 657 VVFLVGTPPKIGVASVSNGRILRRIPFNHGEITALAATPDGRTIFCAA----GGMVWVIP 712

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            ++   + L     I +  +       ++ E       +L  +  +GS ++ I    E  
Sbjct: 713 -EAGEPKELRAGDAIAVDPA----GKFVLVEVGETPVIRLIRVPLDGSREQEI-PRGETG 766

Query: 349 YFDPVWSP-----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSG 401
                 +P      G ++     S   +  G++     +   +  D ++   A  W+P G
Sbjct: 767 RPASALTPNAIGKDGRILTPMGGSTWNWPAGILDASTGRYTRIALDRDVDYHALAWAPDG 826

Query: 402 RSLIFSR 408
           R +  + 
Sbjct: 827 RIVALAS 833



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 50/150 (33%), Gaps = 16/150 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + +  A           +        PK +    ++ + P     GK  L+ V +  
Sbjct: 695 PDGRTIFCAAGGM-------VWVIPEAGEPKELRAGDAIAVDPA----GKFVLVEVGETP 743

Query: 281 AMDIYSVDLQSNATERL----TNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNG 335
            + +  V L  +  + +    T      ++ +    D   +             ++ ++ 
Sbjct: 744 VIRLIRVPLDGSREQEIPRGETGRPASALTPNAIGKDGRILTPMGGSTWNWPAGILDAST 803

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               RI+ D++  Y    W+P G ++A   
Sbjct: 804 GRYTRIALDRDVDYHALAWAPDGRIVALAS 833


>gi|256823288|ref|YP_003147251.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Kangiella koreensis DSM 16069]
 gi|256796827|gb|ACV27483.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kangiella koreensis DSM 16069]
          Length = 806

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 54/178 (30%), Gaps = 13/178 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIY--SVDLQSNAT--ERLTNTLFINISASYSP----DSSQI 316
           +S +G  AL+ +   +  D +  ++D        +            +++     D+  I
Sbjct: 358 WSPDGNNALLMLYSGDNKDRWIATIDFDDKELENQHHMRDKAWVNDWNFNDFGWVDNKTI 417

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIG 374
            + S++ G   LY    N  D                 SP      +   K     F + 
Sbjct: 418 YYTSEQTGFSHLYTKTLNRGDDAL--TKGRYVVNSVTLSPDKKFFYYRANKKHPGIFEVY 475

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +   G   + + +   L     SP G  +I     +      LY   + G +   + 
Sbjct: 476 RVAVGGGDSQAVTDMGGLNDYVLSPDGSQVI-IEHSEALKPKDLYLTAVTGGDVAQLT 532



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 81/283 (28%), Gaps = 59/283 (20%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +     + + +     SPN + V   TYD  +       + + D  P+ +     +   
Sbjct: 226 PKPWYLGKKKEIHTLSLSPNGRYVIVGTYDKSE------DNGKADNMPRFVTEDGYVKN- 278

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISA------------- 307
                +  RAL+   +     +Y +DL +     L+  +  +I                 
Sbjct: 279 -----DEVRALVGTSEPRHETLYLLDLNTREKSELSYEDLPYIEDDPLADIKRDTARKLD 333

Query: 308 -----------------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--- 341
                                   +SPD +  +        +  ++   +  D++     
Sbjct: 334 KEYEAHKGIRSVSLFDWIPSRGIQWSPDGNNALLMLYSGDNKDRWIATIDFDDKELENQH 393

Query: 342 -----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                +   + ++ D  W      I +T        +     +   + L      + + T
Sbjct: 394 HMRDKAWVNDWNFNDFGWV-DNKTIYYTSEQTGFSHLYTKTLNRGDDALTKGRYVVNSVT 452

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            SP  +   +   K      ++Y + + G +   +      +D
Sbjct: 453 LSPDKKFFYYRANKKHPGIFEVYRVAVGGGDSQAVTDMGGLND 495



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 74/240 (30%), Gaps = 44/240 (18%)

Query: 206 LTPSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +    D I   P    +  + Q + Y      +  R +       +  +++ +   +   
Sbjct: 39  VMSDPDWIGNAPENVYWHADGQSIYYQQKIVGNKERAWYQLELATKQAQKLSDKELLER- 97

Query: 263 PRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                +G + ++S  K     +   D+Y   L+S    +LT TL       +   +  + 
Sbjct: 98  -----DGDKGVLSPNKSLKAYNLNGDLYVRYLESGEVRQLTKTLANEGQPMFI-GNQSVA 151

Query: 318 FESDREGKEQLYVMQSNGS------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           F   RE     Y +  N        D +      +      +   Q     + +   ++ 
Sbjct: 152 F---RESNS-FYSINLNDGLISHLVDIRLEDDPDKDEDKGYLEEQQTRYFDYIRQQQDQR 207

Query: 372 AIGVMKKDGSQERLLVEDSNLQAP--------------TWSPSGRSLIFSRKKDGDTGSK 417
                  D  +++ + E S   AP              + SP+GR +I       +   K
Sbjct: 208 EH-----DKKRKQQIAESSERGAPKPWYLGKKKEIHTLSLSPNGRYVIVGTYDKSEDNGK 262


>gi|168701373|ref|ZP_02733650.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 962

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 52/350 (14%), Positives = 117/350 (33%), Gaps = 53/350 (15%)

Query: 115 RVIKEGKDRLRV-----EFRLWDVKDRKQIIGKKFFSSPASW------RKIA---HTISD 160
           +V      R  V     + ++ D K  ++++  K   +  +       ++IA   H +  
Sbjct: 425 KVALSADGRRAVVEQEGDVQVIDTKSGEELMRHKGRINAGTLAVSRDGKRIAFGRHDLYL 484

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL---------TPSRD 211
             ++S    +   +  +  V  +  +   K+   V   DG  + +L         T   D
Sbjct: 485 WEWESGEEPRKLASRSVTGVETAAFAPNGKSLYAV--ADGGKVAWLDVATGRRTGTLDLD 542

Query: 212 QILFEPRFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              ++  FSP+ + +A         +    V L D    +   R    ++      +S++
Sbjct: 543 GTPWKWSFSPDGRTIAVTYVSHLRSKSSGAVVLWDPLSAKEIGRFPVGQTEAKHVSWSAD 602

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVFESDREGKE 326
           G R            ++  D+++      ++          ++ PD    +F +   G +
Sbjct: 603 GTRLAAVT----NYRLWVWDVKTGKPIGPSSIGHEGQVSGFAFGPDGR--LFTA---GDD 653

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                 S  +  + +    ++       SP G L+A +    +   + +       ER  
Sbjct: 654 HTVRSWSPDTGAQGLELIHDSWVRGVAVSPDGALVAGSALRND---LRIWDAKTGAERFR 710

Query: 387 V----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +    E    +   ++P GR L          G  +Y    + RN  L++
Sbjct: 711 LLGNGESGGQRRARFTPDGRRLA-------AWGDDMYLRVWDTRNGKLLS 753



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 83/254 (32%), Gaps = 30/254 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--- 257
            N    TPS D +       P  +       D +    ++L+DT        +       
Sbjct: 368 YNDAAATPSGDLLAVAGIHWPKGK-------DQDSEPVLWLIDTPRRTVRHTVALPPRLG 420

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INIS-ASYSPDSSQ 315
                   S++G+RA++    ++  D+  +D +S     L      IN    + S D  +
Sbjct: 421 GNSQKVALSADGRRAVV----EQEGDVQVIDTKSGEE--LMRHKGRINAGTLAVSRDGKR 474

Query: 316 IVFESDREGKEQLYVM-QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           I F     G+  LY+    +G + ++++           ++P G  +      G+   + 
Sbjct: 475 IAF-----GRHDLYLWEWESGEEPRKLASRSVTGVETAAFAPNGKSLYAVADGGKVAWLD 529

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSIDLNGRNE--TL 430
           V    G +   L  D      ++SP GR++   +       +   +   D     E    
Sbjct: 530 V--ATGRRTGTLDLDGTPWKWSFSPDGRTIAVTYVSHLRSKSSGAVVLWDPLSAKEIGRF 587

Query: 431 INTPAYASDPQWVG 444
                 A    W  
Sbjct: 588 PVGQTEAKHVSWSA 601



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 90/318 (28%), Gaps = 58/318 (18%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I  S  G +G  +         + +    +++     D    + L    D  +     SP
Sbjct: 625 IGPSSIGHEGQVSGFAFGPDGRLFTAGDDHTVRSWSPD-TGAQGLELIHDSWVRGVAVSP 683

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   VA +     + LR++   T  +R               RF+ +G+R          
Sbjct: 684 DGALVAGSAL--RNDLRIWDAKTGAERFRLLGNGESGGQRRARFTPDGRRLAAW-----G 736

Query: 282 MDIYSVDLQSNATERLTNTLFINIS---------------------ASYSPDSSQIVFES 320
            D+Y     +   + L+    +                        A  S D S   F +
Sbjct: 737 DDMYLRVWDTRNGKLLSEHRTVPAGITEAQLDDPWQHKYLLLGFAAADISADGSTFAFCN 796

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                + + V  +    Q+   +           SP G ++A    +G          DG
Sbjct: 797 ----SKAVQVFDATTGKQRGAFEPDPNGVTALALSPDGQVLA---TAGRGTVTETRSPDG 849

Query: 381 SQERLLVED--------------SNLQAP-------TWSPSGRSLIFSRKKDGDTGSKLY 419
                  +D                  +P       T+SP G+ L     ++     +++
Sbjct: 850 RTRSTAADDHRTVLRDVATQKVLWGATSPGSWSGGLTFSPDGKLLAEVTGEEKGYAVRVW 909

Query: 420 SIDLNGRNETLINTPAYA 437
            +  +G+    I  P   
Sbjct: 910 EV-GSGKELGRIALPGRG 926


>gi|50121354|ref|YP_050521.1| oligogalacturonate lyase [Pectobacterium atrosepticum SCRI1043]
 gi|93141291|sp|Q59418|OGL_ERWCT RecName: Full=Oligogalacturonide lyase
 gi|49611880|emb|CAG75329.1| oligogalacturonate lyase [Pectobacterium atrosepticum SCRI1043]
          Length = 388

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 66/183 (36%), Gaps = 32/183 (17%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 ++   +  ++ DG N+R +    +        + P+   + Y +Y  +D  R  
Sbjct: 207 HEGPHDLVDARMWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDTNRYI 266

Query: 241 LMDTRIDRAPKRI----------GNFRSMILAPRFSSNGKRALISVQKDEAMDI------ 284
                +    +++           N+   +L      +G  A + VQ D    I      
Sbjct: 267 RSIDPVTLEDRQLRVMPPCSHLMSNYDGTLLVG----DGSDAPVDVQDDGGYKIENDPFL 322

Query: 285 YSVDLQSNATERLTNTL-FINI----------SASYSPDSSQIVFESDREGKEQLYVMQS 333
           Y  +L++    R+        +            S++PD+ Q++F SD +GK  LY+ + 
Sbjct: 323 YVFNLKTGKEHRIAQHNTSWEVLEGDRQVTHPHPSFTPDNKQVLFTSDVDGKPALYLAKV 382

Query: 334 NGS 336
             S
Sbjct: 383 PDS 385



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 63/189 (33%), Gaps = 28/189 (14%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKE 326
           +G + L     D   + Y +DL+     +LT     N    + SP+   + +  +     
Sbjct: 46  DGSKLLFGAAFDGPWNYYLLDLKEQNATQLTEGKGDNTFGGFLSPNDDALYYVKN---TR 102

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFA------------ 372
            L  +     ++K I Q  +       W    D   +   +   E +             
Sbjct: 103 NLMRVDLTTLEEKTIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFY 162

Query: 373 --------IGVMKKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSID 422
                   I V    G  E +L E+  L  P + P    ++ F  +   D   ++++ I+
Sbjct: 163 FTNPCCRLIRVDLVTGEAETILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFIN 222

Query: 423 LNGRNETLI 431
            +G N   +
Sbjct: 223 EDGTNMRKV 231



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/227 (8%), Positives = 64/227 (28%), Gaps = 35/227 (15%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MD 283
           +  +   +     +    +    + I      +  P +   +        +         
Sbjct: 158 FQEFYFTNPCCRLIRVDLVTGEAETILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDAR 217

Query: 284 IYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQK 339
           ++ ++       ++             + PD S +++ S    +    +  +     + +
Sbjct: 218 MWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDTNRYIRSIDPVTLEDR 277

Query: 340 RISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMKK-DGSQERL 385
           ++      S+    +   G L+                + I       V     G + R+
Sbjct: 278 QLRVMPPCSHLMSNY--DGTLLVGDGSDAPVDVQDDGGYKIENDPFLYVFNLKTGKEHRI 335

Query: 386 LVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +++ +            P+++P  + ++F+   DG     L  +
Sbjct: 336 AQHNTSWEVLEGDRQVTHPHPSFTPDNKQVLFTSDVDGKPALYLAKV 382



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 101/312 (32%), Gaps = 55/312 (17%)

Query: 121 KDRLRVEFRLW-DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
            +++ + F  + D     +++      +P     I H   +  YQ      G   S++LF
Sbjct: 4   GNKIPLTFHTYQDAATGTEVVRL----TPPDV--ICHR--NYFYQKCFFNDG---SKLLF 52

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                 +     +  ++D    N   LT  +    F    SPN   + Y   +  +++RV
Sbjct: 53  ----GAAFDGPWNYYLLDLKEQNATQLTEGKGDNTFGGFLSPNDDALYYVK-NTRNLMRV 107

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L         +   ++            G          +   +  ++++    + LT+
Sbjct: 108 DLTTLEEKTIYQVPDDWVGY---------GTWVA----NSDCTKMVGIEIKKEDWKPLTD 154

Query: 300 TLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP- 356
                          +  F          +L  +     + + I Q+ +     P++ P 
Sbjct: 155 WK----------KFQEFYFT-----NPCCRLIRVDLVTGEAETILQENQW-LGHPIYRPG 198

Query: 357 QGDLIAFTKFSGEKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKK 410
             + +AF            +  + +DG+  R +    E  +     W P G ++I+    
Sbjct: 199 DDNTVAFCHEGPHDLVDARMWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYL 258

Query: 411 DGDTGSKLYSID 422
             DT   + SID
Sbjct: 259 KDDTNRYIRSID 270


>gi|156552750|ref|XP_001599787.1| PREDICTED: similar to wd-repeat protein [Nasonia vitripennis]
          Length = 321

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 83/224 (37%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++Y      + +   +FSPN + +A ++ D      + +  +   +  K I   +  I
Sbjct: 22  YTLKYTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGSYDGKFEKTIAGHKLGI 77

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + I+ +       + L          +++P S+ IV  S
Sbjct: 78  SDVAWSSD-SRLLVSASDDKTLKIWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 135

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 136 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 190

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 191 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 231


>gi|284053159|ref|ZP_06383369.1| WD-40 repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 450

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 88/246 (35%), Gaps = 18/246 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG     + + D +  +I        + +    FSP+ Q +A A+ D      V  
Sbjct: 139 KTLASGSDDYYIRIWDIETGDILANLRGHKERVQSVAFSPDGQTIASASRD----FTVRC 194

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                 +    +    + + A  FS +  + L+S   D  + +++V    N    + +  
Sbjct: 195 WSVDDHKCLTTLRAHTNQLYAVAFSYD-HQLLVSAGDDRTIKLWNVRPTPNLINEINHYP 253

Query: 302 FINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               + ++SPDS +I       G + +  V   N        +  +       +SP G+L
Sbjct: 254 CKIFTVAFSPDSQKIA----VGGSDNIVQVWDINFQQTSLKFRGHQGEIISVNFSPNGEL 309

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKL 418
           +A +        + +      +   +     +     ++SP G+ L        +   +L
Sbjct: 310 LASSSNDNT---VRLWDVKTQECLAIFPGQQVWTYLISFSPDGQLLA---SGGENNTVRL 363

Query: 419 YSIDLN 424
           + +  +
Sbjct: 364 WDVRTH 369



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/311 (14%), Positives = 100/311 (32%), Gaps = 43/311 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G D   +  R+WD++    +   +            H   + +        G  
Sbjct: 138 GKTLASGSDDYYI--RIWDIETGDILANLR-----------GHK--ERVQSVAFSPDG-- 180

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                   +++ S     ++     D         +    L+   FS + Q +       
Sbjct: 181 --------QTIASASRDFTVRCWSVDDHKCLTTLRAHTNQLYAVAFSYDHQLLV----SA 228

Query: 234 EDILRVYLMDTR-IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            D   + L + R        I ++   I    FS + ++  +    D  + ++ ++ Q  
Sbjct: 229 GDDRTIKLWNVRPTPNLINEINHYPCKIFTVAFSPDSQKIAVGGS-DNIVQVWDINFQQT 287

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           + +         IS ++SP+   +   S+      + +      +   I   ++   +  
Sbjct: 288 SLK-FRGHQGEIISVNFSPNGELLASSSN---DNTVRLWDVKTQECLAIFPGQQVWTYLI 343

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKK 410
            +SP G L+A     GE   + +      +             A  +SP G +L  S   
Sbjct: 344 SFSPDGQLLA---SGGENNTVRLWDVRTHECYATFNGHQSWVLAVAFSPDGETLASSS-- 398

Query: 411 DGDTGSKLYSI 421
             D   KL+++
Sbjct: 399 -ADETIKLWNV 408



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A  + D      + + D         +   +  + +  FS +G+    S  +
Sbjct: 134 FSPDGKTLASGSDD----YYIRIWDIETGDILANLRGHKERVQSVAFSPDGQTIA-SASR 188

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  +  +SVD        L        + ++S D   +V      G ++   + +     
Sbjct: 189 DFTVRCWSVD-DHKCLTTLRAHTNQLYAVAFSYDHQLLV----SAGDDRTIKLWNVRPTP 243

Query: 339 KRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             I++        F   +SP    IA    S     +  +    +  +       + +  
Sbjct: 244 NLINEINHYPCKIFTVAFSPDSQKIA-VGGSDNIVQVWDINFQQTSLKFRGHQGEIISVN 302

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
           +SP+G  L  S     D   +L+ +
Sbjct: 303 FSPNGELLASSSN---DNTVRLWDV 324



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 73/208 (35%), Gaps = 16/208 (7%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ Q +A  + D   I    + D         I    S +    FS NGK  L S   D 
Sbjct: 1   PDGQILASGSAD-GTIKLWQIADINNISVAASISAHDSDLRGLAFSPNGK-ILASGSGDL 58

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              ++  D+      +L NTL  + S      ++PD   +   +  +      V   N  
Sbjct: 59  TAKLW--DVSDIHHPQLLNTLQEHTSWIDEIVFTPDGKILAMCAADKKVSLWNVQNINNI 116

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQA 394
               I           V+SP G  +A      + + I +   +       L      +Q+
Sbjct: 117 KLNSILGGWCNWIRSIVFSPDGKTLA---SGSDDYYIRIWDIETGDILANLRGHKERVQS 173

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +SP G+++  + +   D   + +S+D
Sbjct: 174 VAFSPDGQTIASASR---DFTVRCWSVD 198



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 5/103 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S    N++ + D        + P +    +   FSP+ Q +A       +   V L D R
Sbjct: 312 SSSNDNTVRLWDVKTQECLAIFPGQQVWTYLISFSPDGQLLA----SGGENNTVRLWDVR 367

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                      +S +LA  FS +G+    S   DE + +++V 
Sbjct: 368 THECYATFNGHQSWVLAVAFSPDGETLA-SSSADETIKLWNVP 409


>gi|219847949|ref|YP_002462382.1| hypothetical protein Cagg_1031 [Chloroflexus aggregans DSM 9485]
 gi|219542208|gb|ACL23946.1| conserved hypothetical protein [Chloroflexus aggregans DSM 9485]
          Length = 570

 Score = 63.9 bits (154), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 44/327 (13%), Positives = 103/327 (31%), Gaps = 67/327 (20%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +  +   ++      + ++DR     + L   R  I +   ++P+   +AYA       L
Sbjct: 113 IDPTGRHIAVASNQIISLIDRSSGAAQTLVSGR--IAYGLSWAPDGLTLAYAAAPQPPTL 170

Query: 238 RVYLMDTRID---------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
               M                P            P F+S+G+R   +          +  
Sbjct: 171 PFDWMQWSNWCATATVYLIDLPTLNELTIGSGCDPVFASDGRRLAFATSPSAQPSSLNFP 230

Query: 289 LQSNATERLTNTLFIN-----------------ISASYSPDSSQIVFESDREGKE----Q 327
            Q+NA  RL N    N                    ++ PD+  + ++     +      
Sbjct: 231 GQTNAI-RLVNRAGANAWDLATANGSTGLGYLVYRPTWLPDAKMVAYQRFFGYQALVDLN 289

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---------GEKFAIGVMKK 378
           L ++  +    +  +         P +SP G  +A  +++          + ++  +++ 
Sbjct: 290 LTMITDSSGGTENPTLIGTGWLRPPAFSPDGRYVASVEYNFSDARGFSGYDVWSFALVEL 349

Query: 379 DGSQ------------ERLLVEDSNLQAPTWSPSGRSLIFSR-------------KKDGD 413
            G +             +L+ +   + +  WSP+G +L+                     
Sbjct: 350 VGQRSEASPSGNLTLLGQLVTKLPRITSAAWSPNGNNLVVLAPANWNPTDNPNDPLYSFT 409

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDP 440
           T  +L+ +   G+ +  +N+    + P
Sbjct: 410 TPGELWLLSSGGQPQQTVNSNVDYASP 436



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 79/243 (32%), Gaps = 51/243 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              P  + +A A+       ++  +  R   A + + + R +     ++ +G     +  
Sbjct: 112 AIDPTGRHIAVASN------QIISLIDRSSGAAQTLVSGR-IAYGLSWAPDGLTLAYAAA 164

Query: 278 KDE---------------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
                                +Y +DL +     LT     +    ++ D  ++ F +  
Sbjct: 165 PQPPTLPFDWMQWSNWCATATVYLIDLPTLNE--LTIGSGCD--PVFASDGRRLAFATSP 220

Query: 323 EGKE----------QLYVMQSNGSDQKRI-----SQDKEASYFDPVWSPQGDLIAFTKFS 367
             +            + ++   G++   +     S       + P W P   ++A+ +F 
Sbjct: 221 SAQPSSLNFPGQTNAIRLVNRAGANAWDLATANGSTGLGYLVYRPTWLPDAKMVAYQRFF 280

Query: 368 GEKFAI-----GVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSK 417
           G +  +      +    G  E   L+    L+ P +SP GR +           G +G  
Sbjct: 281 GYQALVDLNLTMITDSSGGTENPTLIGTGWLRPPAFSPDGRYVASVEYNFSDARGFSGYD 340

Query: 418 LYS 420
           ++S
Sbjct: 341 VWS 343



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 33/189 (17%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-----TPSRDQI 213
            D ++ S  G +  F +       S+      N++ +++R GAN   L     +     +
Sbjct: 203 CDPVFAS-DGRRLAFATSPSAQPSSLNFPGQTNAIRLVNRAGANAWDLATANGSTGLGYL 261

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR-----APKRIGNFRSMILAPRFSSN 268
           ++ P + P+ + VAY  +     L    +    D       P  IG     +  P FS +
Sbjct: 262 VYRPTWLPDAKMVAYQRFFGYQALVDLNLTMITDSSGGTENPTLIGT--GWLRPPAFSPD 319

Query: 269 GKRAL-----ISVQKDE-AMDIYSVDL-----------QSNATE---RLTNTLFINISAS 308
           G+         S  +     D++S  L            S       +L   L    SA+
Sbjct: 320 GRYVASVEYNFSDARGFSGYDVWSFALVELVGQRSEASPSGNLTLLGQLVTKLPRITSAA 379

Query: 309 YSPDSSQIV 317
           +SP+ + +V
Sbjct: 380 WSPNGNNLV 388



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 51/140 (36%), Gaps = 26/140 (18%)

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R G   L  +  + + ++ ++     +  D    P G  IA          I ++ +   
Sbjct: 87  RGGS--LVAIDPSSNQERVLA----NNVRDVAIDPTGRHIAVASNQ----IISLIDRSSG 136

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-------------GSKLYSIDLNGRNE 428
             + LV        +W+P G +L ++      T              + +Y IDL   NE
Sbjct: 137 AAQTLVSGRIAYGLSWAPDGLTLAYAAAPQPPTLPFDWMQWSNWCATATVYLIDLPTLNE 196

Query: 429 TLINT---PAYASDPQWVGF 445
             I +   P +ASD + + F
Sbjct: 197 LTIGSGCDPVFASDGRRLAF 216


>gi|332878866|ref|ZP_08446581.1| peptidase, S9A/B/C family, catalytic domain protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332683217|gb|EGJ56099.1| peptidase, S9A/B/C family, catalytic domain protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 718

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 62/297 (20%), Positives = 98/297 (32%), Gaps = 51/297 (17%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           RILF+  ++ +GI      +            PSR   L   + +P    + Y+  D   
Sbjct: 2   RILFLLITLFTGIAWGQPAITLDKIWTQGTFYPSRMYNLKTLQHAPQYTVLEYSPADGAQ 61

Query: 236 ILRVYLMDTRIDRAPK-RIGNFRSMIL--APRFSSNGKRALISV------QKDEAMDIYS 286
            + +Y   T        R  + +  +   +  F+ N ++ LI+V      +     D Y 
Sbjct: 62  EINLYDFATLTKVKTIFRAADHKQFMRLNSYTFTPNEQQLLIAVNSEYIYRHSFIADYYL 121

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK- 345
            DL S    ++TN   I  S   SPD  +I F         LYV       +KRI+ D  
Sbjct: 122 YDLASGKLRKITNDK-IQ-SPLVSPDGKKIAFAR----NNDLYVYDLATGKEKRITTDGA 175

Query: 346 ----------------EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                            ++     W+  G  +AF +F  ++     M   G+      + 
Sbjct: 176 KNKIINGIADWVYEEEFSTVRFFDWNANGTQLAFVRFDEQQVPEFSMDVYGAGLYPTQQT 235

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGS--KLYSIDLNGRNETLINTPA-YASDPQWV 443
                           F   K G+  S   L+  DL     T I   A Y    QW 
Sbjct: 236 ----------------FKYPKAGEPNSVVSLHIYDLAKAKTTPIALEAYYIPRLQWS 276



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 120/343 (34%), Gaps = 61/343 (17%)

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL  S     I+ D  +  + +PD                  G+ I   ++    +  ++
Sbjct: 123 DLA-SGKLRKITNDKIQSPLVSPD------------------GKKIAFARNN---DLYVY 160

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN-----SRILFVSESVVS 186
           D+   K+    K  ++  +  KI + I+D +Y+        F+     +++ FV      
Sbjct: 161 DLATGKE----KRITTDGAKNKIINGIADWVYEEEFSTVRFFDWNANGTQLAFVRF---- 212

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +     MD  GA +                 P QQ   Y    + + +    +    
Sbjct: 213 DEQQVPEFSMDVYGAGLY----------------PTQQTFKYPKAGEPNSVVSLHIYDLA 256

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYS-VDLQSNATERLTNTLF-- 302
                 I      I   ++S+N K   + ++ + +       VD Q+  T  L       
Sbjct: 257 KAKTTPIALEAYYIPRLQWSNNPKYLTVQTLNRHQNDWQVVQVDAQTFQTRPLVIEKSKT 316

Query: 303 ---INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              IN   ++  D+S  +++S+R+G   LY   + G   ++++  +        +  +  
Sbjct: 317 YVEINDKITFLADNS-FIYQSERDGYNHLYHCDAQGKSVRQLTFGQTEVTDLYGYDAKNK 375

Query: 360 LIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            + +  T+  G + AI  +  +G  +R L   +     T+S  
Sbjct: 376 QLFYQATQADGIQRAICAVGLNGKNQRTLSAVAGTHKATFSGD 418



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 34/312 (10%), Positives = 91/312 (29%), Gaps = 65/312 (20%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I   SE +          + D     +R +T  +   +  P  SP+ +K+A+A  +D   
Sbjct: 103 IAVNSEYIYRHSFIADYYLYDLASGKLRKITNDK---IQSPLVSPDGKKIAFARNND--- 156

Query: 237 LRVYLMDTRIDRAPKRIGNFR-----------------SMILAPRFSSNGKRALISVQKD 279
             +Y+ D    +  +   +                   S +    +++NG +       +
Sbjct: 157 --LYVYDLATGKEKRITTDGAKNKIINGIADWVYEEEFSTVRFFDWNANGTQLAFVRFDE 214

Query: 280 EAMDIYSVDLQSNA--TERLTNTLFINISAS----------------------------- 308
           + +  +S+D+        + T         +                             
Sbjct: 215 QQVPEFSMDVYGAGLYPTQQTFKYPKAGEPNSVVSLHIYDLAKAKTTPIALEAYYIPRLQ 274

Query: 309 YSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLIA 362
           +S +   +  +  +  +   Q+  + +     + +  +K  +Y +      +      I 
Sbjct: 275 WSNNPKYLTVQTLNRHQNDWQVVQVDAQTFQTRPLVIEKSKTYVEINDKITFLADNSFI- 333

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYS 420
           +         +      G   R L          +      + L +   +       + +
Sbjct: 334 YQSERDGYNHLYHCDAQGKSVRQLTFGQTEVTDLYGYDAKNKQLFYQATQADGIQRAICA 393

Query: 421 IDLNGRNETLIN 432
           + LNG+N+  ++
Sbjct: 394 VGLNGKNQRTLS 405


>gi|261821447|ref|YP_003259553.1| oligogalacturonide lyase [Pectobacterium wasabiae WPP163]
 gi|261605460|gb|ACX87946.1| Oligogalacturonide lyase [Pectobacterium wasabiae WPP163]
          Length = 388

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 66/183 (36%), Gaps = 32/183 (17%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 ++   +  ++ DG N+R +    +        + P+   + Y +Y  +D  R  
Sbjct: 207 HEGPHDLVDARMWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDTNRYI 266

Query: 241 LMDTRIDRAPKRI----------GNFRSMILAPRFSSNGKRALISVQKDEAMDI------ 284
                +    +++           N+   +L      +G  A + VQ D    I      
Sbjct: 267 RSIDPVTLEDRQLRIMPPCSHLMSNYDGTLLVG----DGSDAPVDVQDDGGYKIENDPFL 322

Query: 285 YSVDLQSNATERLTNTL-FINI----------SASYSPDSSQIVFESDREGKEQLYVMQS 333
           Y  +L++    R+        +            S++PD+ Q++F SD +GK  LY+ + 
Sbjct: 323 YVFNLKTGKEHRIAQHNTSWEVLEGDRQVTHPHPSFTPDNKQVLFTSDVDGKPALYLAKV 382

Query: 334 NGS 336
             S
Sbjct: 383 PDS 385



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 64/189 (33%), Gaps = 28/189 (14%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKE 326
           +G + L     D   + Y +DL++    +LT     N    + SP+   + +  +     
Sbjct: 46  DGSKLLFGAAFDGPWNYYLLDLKAQNATQLTEGKGDNTFGGFLSPNDDALYYVKN---TR 102

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFA------------ 372
            L  +     ++K I Q  +       W    D   +   +   E +             
Sbjct: 103 NLMRVDLATLEEKTIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFY 162

Query: 373 --------IGVMKKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSID 422
                   I V    G  E +L E+  L  P + P    ++ F  +   D   ++++ I+
Sbjct: 163 FTNPCCRLIRVDLVTGEAETILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFIN 222

Query: 423 LNGRNETLI 431
            +G N   +
Sbjct: 223 EDGTNMRKV 231



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/227 (8%), Positives = 64/227 (28%), Gaps = 35/227 (15%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MD 283
           +  +   +     +    +    + I      +  P +   +        +         
Sbjct: 158 FQEFYFTNPCCRLIRVDLVTGEAETILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDAR 217

Query: 284 IYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQK 339
           ++ ++       ++             + PD S +++ S    +    +  +     + +
Sbjct: 218 MWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDTNRYIRSIDPVTLEDR 277

Query: 340 RISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMKK-DGSQERL 385
           ++      S+    +   G L+                + I       V     G + R+
Sbjct: 278 QLRIMPPCSHLMSNY--DGTLLVGDGSDAPVDVQDDGGYKIENDPFLYVFNLKTGKEHRI 335

Query: 386 LVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +++ +            P+++P  + ++F+   DG     L  +
Sbjct: 336 AQHNTSWEVLEGDRQVTHPHPSFTPDNKQVLFTSDVDGKPALYLAKV 382



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 101/312 (32%), Gaps = 55/312 (17%)

Query: 121 KDRLRVEFRLW-DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
            +++ + F  + D     +++      +P     I H   +  YQ      G   S++LF
Sbjct: 4   GNKIPLTFHTYQDSATGTEVVRL----TPPDV--ICHR--NYFYQKCFFNDG---SKLLF 52

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                 +     +  ++D    N   LT  +    F    SPN   + Y   +  +++RV
Sbjct: 53  ----GAAFDGPWNYYLLDLKAQNATQLTEGKGDNTFGGFLSPNDDALYYVK-NTRNLMRV 107

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L         +   ++            G          +   +  ++++    + LT+
Sbjct: 108 DLATLEEKTIYQVPDDWVGY---------GTWVA----NSDCTKMVGIEIKKEDWKPLTD 154

Query: 300 TLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP- 356
                          +  F          +L  +     + + I Q+ +     P++ P 
Sbjct: 155 WK----------KFQEFYFT-----NPCCRLIRVDLVTGEAETILQENQW-LGHPIYRPG 198

Query: 357 QGDLIAFTKFSGEKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKK 410
             + +AF            +  + +DG+  R +    E  +     W P G ++I+    
Sbjct: 199 DDNTVAFCHEGPHDLVDARMWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYL 258

Query: 411 DGDTGSKLYSID 422
             DT   + SID
Sbjct: 259 KDDTNRYIRSID 270


>gi|118618546|ref|YP_906878.1| hypothetical protein MUL_3189 [Mycobacterium ulcerans Agy99]
 gi|118570656|gb|ABL05407.1| conserved secreted protein [Mycobacterium ulcerans Agy99]
          Length = 395

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 54/297 (18%), Positives = 89/297 (29%), Gaps = 48/297 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-- 249
           SL V D  G   R LT        +P  SP+  +VAY   +        L    +     
Sbjct: 55  SLYVSDPAGTPGRKLTDG--PADTQPAPSPDGTRVAYVHKNSTSDYGGELWVLDLAEDAP 112

Query: 250 -------------PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQS 291
                        P   G+    I+ PR+S  GK+    +Q D         +      +
Sbjct: 113 AGAPHRLVDPAALPPPPGHRLGQIVNPRWSPTGKQIAF-LQNDSNGTMAGGLLIVAAADT 171

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            +              +++PD + I + + R     + V               + + + 
Sbjct: 172 GSVLSPPQRPAAADQYAWAPDGNHIAWANARSDVSPIDVNALEVGAASAPVAM-DTNAYS 230

Query: 352 PVWSPQGDLIAFTKF--SGEKF-AIGVMKKDGSQERLLVEDSNLQAPT------WSPSGR 402
             +   G  I FT    SG  F  I    +DG              P       ++ +G 
Sbjct: 231 VAYGSDGRSILFTNGDASGPNFTEIPFALRDGGIYSAAAPGGTGTDPAGAPRTVFARAGS 290

Query: 403 S-----------LIFSRKKDGDTGS--KLYSIDLNGRNETLI--NTPAYASDPQWVG 444
                       L F+  + G+  S   L  +D++G     I  N  A    P+W  
Sbjct: 291 YYSDLAALSSGELAFTETRSGEGESSKSLQVLDVSGGAPQTIAANVAAEVQGPRWGA 347



 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 22/152 (14%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQLYVM----QS 333
           A  +Y  D       +LT+    +   + SPD +++ +    S  +   +L+V+     +
Sbjct: 53  AGSLYVSDPAGTPGRKLTDGPA-DTQPAPSPDGTRVAYVHKNSTSDYGGELWVLDLAEDA 111

Query: 334 NGSDQKRISQD---------KEASYFDPVWSPQGDLIAFTKFSG-----EKFAIGVMKKD 379
                 R+            +     +P WSP G  IAF +            I      
Sbjct: 112 PAGAPHRLVDPAALPPPPGHRLGQIVNPRWSPTGKQIAFLQNDSNGTMAGGLLIVAAADT 171

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           GS        +      W+P G  + ++  + 
Sbjct: 172 GSVLSPPQRPAAADQYAWAPDGNHIAWANARS 203



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 42/311 (13%), Positives = 98/311 (31%), Gaps = 35/311 (11%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI-AHTISDDIYQSITGEKG 171
              V K        E  + D+ +            PA+      H +       I   + 
Sbjct: 87  VAYVHKNSTSDYGGELWVLDLAEDAPAGAPHRLVDPAALPPPPGHRLG-----QIVNPRW 141

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
               + +   ++  +G +   L ++           P R     +  ++P+   +A+A  
Sbjct: 142 SPTGKQIAFLQNDSNGTMAGGLLIVAAADTGSVLSPPQRPAAADQYAWAPDGNHIAWANA 201

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--L 289
              D+  + +    +  A   +    +   +  + S+G+  L +       +   +   L
Sbjct: 202 R-SDVSPIDVNALEVGAASAPVA-MDTNAYSVAYGSDGRSILFTNGDASGPNFTEIPFAL 259

Query: 290 QSNATERLTNTLFINISASYSP-----------------DSSQIVFESDREGKEQ----L 328
           +                 + +P                  S ++ F   R G+ +    L
Sbjct: 260 RDGGIYSAAAPGGTGTDPAGAPRTVFARAGSYYSDLAALSSGELAFTETRSGEGESSKSL 319

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V+  +G   + I+ +  A    P W   G+++A+ + S  K  + +   D    + +  
Sbjct: 320 QVLDVSGGAPQTIAANVAAEVQGPRWGA-GNVVAYLESSPGK-PLVITDLDKRTRQQI-- 375

Query: 389 DSNLQAPTWSP 399
           D+ + A  W P
Sbjct: 376 DTGVDAFAWPP 386


>gi|332299444|ref|YP_004441365.1| Dipeptidyl-peptidase IV [Porphyromonas asaccharolytica DSM 20707]
 gi|332176507|gb|AEE12197.1| Dipeptidyl-peptidase IV [Porphyromonas asaccharolytica DSM 20707]
          Length = 738

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 62/366 (16%), Positives = 124/366 (33%), Gaps = 65/366 (17%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             L DV ++KQI+G  +F++    ++ +    ++   ++  E+G   + +++  +   S 
Sbjct: 130 LYLIDV-EQKQIVG--YFATGKIEKRASLLSPNERNLAVKSEEG---TLLIYTIQPAGSA 183

Query: 188 IIKNSLCVMD------RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
                L   D        G ++       D  LF   +SP+ +++A+   D   +    +
Sbjct: 184 PQAPMLVATDEAEAAVVYGESVHQNEFGIDGGLF---WSPDSRQLAFYRMDQSMVAPYPI 240

Query: 242 MDTRIDRAPKRIGNFRSMILAP--------------------------------RFSSNG 269
           +D    +A  +   +  M   P                                 +  N 
Sbjct: 241 VDMTPHKAVVQPVRYP-MAGTPSHHVTLGVFHVESQQITYLATGGDPEHYLTNVAWHPNS 299

Query: 270 KRALISVQKDEAMDIYS--VDLQSNA--TERLTNTLFINISAS----YSPD--SSQIVFE 319
           K+  I+        ++    D Q+ A        T    +       + P     Q V+E
Sbjct: 300 KKVYIAELNRGQDHLFLNGYDAQTGAHVETLFEETDAHYVEPQRPMMFVPGSRGEQFVWE 359

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMK 377
           S REG  QLY+  S G   ++++  +        + P+G+ I +     S  +  I    
Sbjct: 360 SRREGYRQLYLYSSTGKLIRKLTDMEGEVTDIYGFDPKGERIYYQAAYPSPLERHIFASD 419

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               +   L + +      +SP  +     + +       +   D NG     I+    A
Sbjct: 420 LKRGRTIQLSKVAGTHDAIFSPD-KQYYIDQLQSATIARSVMLHDNNGLQLRQIH---QA 475

Query: 438 SDPQWV 443
            DP WV
Sbjct: 476 PDP-WV 480


>gi|327538785|gb|EGF25433.1| secreted protein containing Cytochrome C, Planctomycete domain
           [Rhodopirellula baltica WH47]
          Length = 925

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 70/184 (38%), Gaps = 12/184 (6%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG+ ++ L   RD +L+  +FSP+ +++A A YD +    + + DT      + +    
Sbjct: 212 ADGSVLKELVGHRD-VLYAAKFSPDGKRIATAGYDRK----ILIWDTSTGEVVQELLGHN 266

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             I    FS +G   LIS   DE + ++ V       + L+          +S D   ++
Sbjct: 267 GAIFDLAFSPDGT-LLISACADETVKVWEV-ATGQRLDTLSQPEGEVNRVLFSKDGRWML 324

Query: 318 FESDREGKEQLYVMQSNGSDQ----KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             S  + + +++ + S          +     E+       +P G  +     +G    +
Sbjct: 325 AGS-ADNRLRVWKLVSKTEAAINPIVQTRFVDESPISGMALTPDGRGLVIVSEAGNAKVL 383

Query: 374 GVMK 377
               
Sbjct: 384 RTDD 387



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 72/224 (32%), Gaps = 12/224 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  ++  A+       +  L +       K +   R ++ A +FS +GKR       
Sbjct: 186 FSGDGTQLLAASGLTGGYGQATLFNVADGSVLKELVGHRDVLYAAKFSPDGKRIA---TA 242

Query: 279 DEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                I   D  +    + L          ++SPD + ++        E + V +     
Sbjct: 243 GYDRKILIWDTSTGEVVQELLGHNGAIFDLAFSPDGTLLI---SACADETVKVWEVATGQ 299

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAP- 395
           +       E      ++S  G  +             ++ K  +    +V+     ++P 
Sbjct: 300 RLDTLSQPEGEVNRVLFSKDGRWMLAGSADNRLRVWKLVSKTEAAINPIVQTRFVDESPI 359

Query: 396 ---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                +P GR L+   +       +     + G  E L  TP+ 
Sbjct: 360 SGMALTPDGRGLVIVSEAGNAKVLRTDDWSVVGAMEPLGETPSD 403



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 63/177 (35%), Gaps = 8/177 (4%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--LQSNATERLTNTLFIN 304
               K + N    + + +FS +G + L +          ++      +  + L     + 
Sbjct: 168 SGESKEVANPWGKVNSLQFSGDGTQLLAASGLTGGYGQATLFNVADGSVLKELVGHRDVL 227

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +A +SPD  +I          ++ +  ++  +  +       + FD  +SP G L+  +
Sbjct: 228 YAAKFSPDGKRIA---TAGYDRKILIWDTSTGEVVQELLGHNGAIFDLAFSPDGTLLI-S 283

Query: 365 KFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             + E   +  +   G +   L +    +    +S  GR ++     +     KL S
Sbjct: 284 ACADETVKVWEV-ATGQRLDTLSQPEGEVNRVLFSKDGRWMLAGSADNRLRVWKLVS 339



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 82/265 (30%), Gaps = 38/265 (14%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L++V D   +              + H   D +Y +     G          + + +   
Sbjct: 208 LFNVADGSVLKEL-----------VGHR--DVLYAAKFSPDG----------KRIATAGY 244

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              + + D     +       +  +F+  FSP+   +  A  D+     V + +    + 
Sbjct: 245 DRKILIWDTSTGEVVQELLGHNGAIFDLAFSPDGTLLISACADE----TVKVWEVATGQR 300

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISA- 307
              +      +    FS +G+  L +   D  + ++ +  ++ A    +  T F++ S  
Sbjct: 301 LDTLSQPEGEVNRVLFSKDGRWML-AGSADNRLRVWKLVSKTEAAINPIVQTRFVDESPI 359

Query: 308 ---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              + +PD   +V  S+    + L     +         +  +  F    S  G  +   
Sbjct: 360 SGMALTPDGRGLVIVSEAGNAKVLRTDDWSVVGAMEPLGETPSDLFV---SKDGTSVTIA 416

Query: 365 KFSGE--KFAIGVMKKDGSQERLLV 387
              G   K  +  +    S  R   
Sbjct: 417 LMDGRVVKRVLPEINPRDSGPRRTT 441


>gi|195127848|ref|XP_002008379.1| GI11850 [Drosophila mojavensis]
 gi|193919988|gb|EDW18855.1| GI11850 [Drosophila mojavensis]
          Length = 402

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 74/204 (36%), Gaps = 20/204 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  + + RFSP+ Q++A ++ D      V L + +      R  +    +    +S
Sbjct: 11  FTGHSGAITQLRFSPDGQQIASSSMDT----TVILWNLKQAARCIRFASHSEPVYGVSWS 66

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             G     S   D  + ++   ++  + E L +   +  S  + P    ++  SD +   
Sbjct: 67  PKGTFMA-SCSHDRTVKVWEPKVRGGSAEFLAHGKPV-RSVDFDPTGQLLLTASD-DKSA 123

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +L+ +    S ++ IS   + + +     +SP G L+A          + +   +  +  
Sbjct: 124 KLWRV----SRRQFISSFTQQTNWVRAAKFSPNGKLMATVSDDKS---LRIYDLNSGECV 176

Query: 385 LLVEDSNLQAP---TWSPSGRSLI 405
               +    +P    W P G  + 
Sbjct: 177 RTFTEERA-SPRQLAWHPWGNMVA 199



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 64/172 (37%), Gaps = 9/172 (5%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +        I   RFS +G++   S   D  + ++++   +    R  +        S+S
Sbjct: 9   RHFTGHSGAITQLRFSPDGQQIA-SSSMDTTVILWNLKQAARCI-RFASHSEPVYGVSWS 66

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P  + +   S  +   +++  +  G   + ++  K        + P G L+  T    + 
Sbjct: 67  PKGTFMASCSH-DRTVKVWEPKVRGGSAEFLAHGKP--VRSVDFDPTGQLLL-TASDDKS 122

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +  + +         + + ++A  +SP+G+ +        D   ++Y ++
Sbjct: 123 AKLWRVSRRQFISSFTQQTNWVRAAKFSPNGKLMATVSD---DKSLRIYDLN 171



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 7/129 (5%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
               T          +SPD  QI   S  +    L+ ++      +  S  +    +   
Sbjct: 8   ERHFTGHSGAITQLRFSPDGQQIA-SSSMDTTVILWNLKQAARCIRFASHSEP--VYGVS 64

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           WSP+G  +A          +   K  G     L     +++  + P+G+ L+ +     D
Sbjct: 65  WSPKGTFMASCSHD-RTVKVWEPKVRGGSAEFLAHGKPVRSVDFDPTGQLLLTASD---D 120

Query: 414 TGSKLYSID 422
             +KL+ + 
Sbjct: 121 KSAKLWRVS 129


>gi|58700238|ref|ZP_00374720.1| tolB protein [Wolbachia endosymbiont of Drosophila ananassae]
 gi|58533246|gb|EAL57763.1| tolB protein [Wolbachia endosymbiont of Drosophila ananassae]
          Length = 65

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 31/54 (57%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               +I S+DL S  T+++T    I+ S S+SPD   + F SD  G +QLYV+ 
Sbjct: 2   GGETNILSLDLSSKRTKKITKGSAISTSPSFSPDQKYMAFSSDISGSQQLYVID 55



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 3/64 (4%)

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           G +  I  +     + + + + S +  +P++SP  + + FS    G    +LY ID   +
Sbjct: 2   GGETNILSLDLSSKRTKKITKGSAISTSPSFSPDQKYMAFSSDISGSQ--QLYVIDFTNK 59

Query: 427 NETL 430
           ++ L
Sbjct: 60  SKNL 63



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 18/43 (41%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +  K+I    ++  +P FS + K    S     +  +Y +D
Sbjct: 13  SSKRTKKITKGSAISTSPSFSPDQKYMAFSSDISGSQQLYVID 55


>gi|296387877|ref|ZP_06877352.1| putative TolB-like translocation protein [Pseudomonas aeruginosa
           PAb1]
          Length = 335

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 269 GKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESD 321
           G R +        D + ++Y  D +S +T +L N    NI     A +SPD   + F   
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQL-NQPGWNIEDPMNAHFSPDGRYLTFMGR 103

Query: 322 REGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           + G   ++     G+     ++        DP +S  G  +        + A  V   DG
Sbjct: 104 QNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQVVLKHEGDIRLATLVFNGDG 163

Query: 381 SQE----RLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           S      + +  D        P  +PSG+ ++++         ++   +L       + T
Sbjct: 164 SVGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYAT--GAGDSLRVVRRNLENGQVNPLAT 221

Query: 434 PA 435
           PA
Sbjct: 222 PA 223



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 14/188 (7%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQK 278
             ++ Y +Y +       L          R  N     +       FS +G+      ++
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIEDPMNAHFSPDGRYLTFMGRQ 104

Query: 279 DEAMDIYSVDLQSNA-TERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNG- 335
           + A  +++  +        LT      N    +S D  Q+V + + + +    V   +G 
Sbjct: 105 NGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQVVLKHEGDIRLATLVFNGDGS 164

Query: 336 ---SDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--- 388
              S  K ++ D  ++    P  +P G  + +   +G+   +     +  Q   L     
Sbjct: 165 VGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYATGAGDSLRVVRRNLENGQVNPLATPAA 224

Query: 389 DSNLQAPT 396
                 P 
Sbjct: 225 GGRDYYPV 232



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 75/278 (26%), Gaps = 15/278 (5%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH                     L     +  G   ++L + D    + R L      I 
Sbjct: 25  AHAACTANLALQPASSLPALGGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIE 84

Query: 215 --FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKR 271
                 FSP+ + + +          V+       +AP  +          P+FS +G++
Sbjct: 85  DPMNAHFSPDGRYLTFMG-RQNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQ 143

Query: 272 ALISVQKDEAMDIYSVDLQSN---ATERLTNTLFINIS---ASYSPDSSQIVFESDREGK 325
            ++  + D  +     +   +   +  +       +        +P    +V+ +     
Sbjct: 144 VVLKHEGDIRLATLVFNGDGSVGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYATGAGDS 203

Query: 326 EQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---KKDGS 381
            ++            + +       + PV                   + ++      G+
Sbjct: 204 LRVVRRNLENGQVNPLATPAAGGRDYYPVVRDYTAYFLSRTQPAGNDQLAMVVPNSPPGT 263

Query: 382 QERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKL 418
              L +          +P +   LIFS      T S L
Sbjct: 264 PAILPLNHCQGDNSDAAPVNEDYLIFSSTSFDPTYSLL 301


>gi|116667018|pdb|2DCM|A Chain A, The Crystal Structure Of S603a Mutated Prolyl Tripeptidyl
           Aminopeptidase Complexed With Substrate
          Length = 706

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 91/276 (32%), Gaps = 50/276 (18%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANI----RYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           L+++     G   +    +  DG       + +      I     +SP    +A+   D 
Sbjct: 143 LYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ 202

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPR----------------------------- 264
             +    ++D     A  +   +  M   P                              
Sbjct: 203 SMVKPTPIVDYHPLEAESKPLYYP-MAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT 261

Query: 265 ---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----SA----SYSPD 312
              +S + +  L   + + A +   V+     T R   TLF+             ++ P 
Sbjct: 262 NLSWSPD-ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPG 320

Query: 313 SS-QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGE 369
           S+ Q +++S R+G   LY+  + G   +++++ +        + P+G  + F     S  
Sbjct: 321 SNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPL 380

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +     +   G + + L  +S +     SP G ++I
Sbjct: 381 ERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAII 416



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 57/169 (33%), Gaps = 17/169 (10%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEP--- 217
           + +T      +  IL+V+E       +N   V   D   G  +R L    D+   EP   
Sbjct: 258 KFLTNLSWSPDENILYVAEV---NRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314

Query: 218 -RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALIS 275
             F P      +      D      +     R  +++      +     F   G R    
Sbjct: 315 LTFLP-GSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFE 373

Query: 276 VQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--VFES 320
             +        Y +D++   T+ LT    ++ +   SPD S I  +F+S
Sbjct: 374 STEASPLERHFYCIDIKGGKTKDLTPESGMHRT-QLSPDGSAIIDIFQS 421


>gi|116667002|pdb|2D5L|A Chain A, Crystal Structure Of Prolyl Tripeptidyl Aminopeptidase
           From Porphyromonas Gingivalis
 gi|168176995|pdb|2EEP|A Chain A, Prolyl Tripeptidyl Aminopeptidase Complexed With An
           Inhibitor
          Length = 706

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 91/276 (32%), Gaps = 50/276 (18%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANI----RYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           L+++     G   +    +  DG       + +      I     +SP    +A+   D 
Sbjct: 143 LYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ 202

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPR----------------------------- 264
             +    ++D     A  +   +  M   P                              
Sbjct: 203 SMVKPTPIVDYHPLEAESKPLYYP-MAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT 261

Query: 265 ---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----SA----SYSPD 312
              +S + +  L   + + A +   V+     T R   TLF+             ++ P 
Sbjct: 262 NLSWSPD-ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPG 320

Query: 313 SS-QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGE 369
           S+ Q +++S R+G   LY+  + G   +++++ +        + P+G  + F     S  
Sbjct: 321 SNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPL 380

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +     +   G + + L  +S +     SP G ++I
Sbjct: 381 ERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAII 416



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 57/169 (33%), Gaps = 17/169 (10%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEP--- 217
           + +T      +  IL+V+E       +N   V   D   G  +R L    D+   EP   
Sbjct: 258 KFLTNLSWSPDENILYVAEV---NRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314

Query: 218 -RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALIS 275
             F P      +      D      +     R  +++      +     F   G R    
Sbjct: 315 LTFLP-GSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFE 373

Query: 276 VQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--VFES 320
             +        Y +D++   T+ LT    ++ +   SPD S I  +F+S
Sbjct: 374 STEASPLERHFYCIDIKGGKTKDLTPESGMHRT-QLSPDGSAIIDIFQS 421


>gi|323965855|gb|EGB61305.1| hypothetical protein ERJG_02820 [Escherichia coli M863]
          Length = 416

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 41/203 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA----LISVQKDEAMDIYSVDL-------------QSNATE 295
           +GN     +   FS  G++     ++ + +DEA    + D              +     
Sbjct: 223 VGNHALAFIGDTFSPKGEKVPELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQR 282

Query: 296 RLTNT------LFINISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT T        +N+   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 283 RLTFTHQRAYPGVVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 342

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I        +   L E      +  A  +SP G
Sbjct: 343 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDG 398

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN 424
           + L +        G +L+  + +
Sbjct: 399 QWLAWME------GGQLWITETD 415



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 403


>gi|323700133|ref|ZP_08112045.1| WD40 domain-containing protein [Desulfovibrio sp. ND132]
 gi|323460065|gb|EGB15930.1| WD40 domain-containing protein [Desulfovibrio desulfuricans ND132]
          Length = 547

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 84/238 (35%), Gaps = 65/238 (27%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAM-----------------DIYSVDLQSNATERLT-- 298
           SM L    S +G+ A  +V +  A                   I  +D  + A   L   
Sbjct: 264 SMGLFTSLSPDGRFAASTVGETSAFIMLDDLYFSQMFYPATGQIAILDRGTGAVAPLPGA 323

Query: 299 -NTLFINISASYSPDSSQIVFES-----------------DREGKEQLYVMQSN------ 334
            +T F+  + S++PD +++ F                     +  + +    +       
Sbjct: 324 DDTRFVQTNPSFTPDGTRLAFARADVQPDLVARIVAGDLRKEDPAQDIRTANAKYPIQFD 383

Query: 335 ----------GSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGE-----KFAIGVMK 377
                     G + + I         +  P +SP G  +AFT+ +          + ++ 
Sbjct: 384 LWSVPFDGGRGGEARPIEGASNNGLSNVFPKYSPDGRWLAFTQCATGLVLQPDARLAIVP 443

Query: 378 KDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYS--IDLNGRNETLI 431
            +G +  +L  ++ L     TWSP+ R L F+  K     ++++   ID +GR+   +
Sbjct: 444 AEGGEAHVLAANTKLMNSWHTWSPNSRWLAFAS-KGNSPFTEIFLTHIDDDGRSSPPL 500



 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 68/227 (29%), Gaps = 52/227 (22%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALISVQ------ 277
           + ++        ++ ++D          G  + R +   P F+ +G R   +        
Sbjct: 294 LYFSQMFYPATGQIAILDRGTGAVAPLPGADDTRFVQTNPSFTPDGTRLAFARADVQPDL 353

Query: 278 -----------KDEAMDIYSVDLQ----------------SNATERL---TNTLFINISA 307
                      +D A DI + + +                      +   +N    N+  
Sbjct: 354 VARIVAGDLRKEDPAQDIRTANAKYPIQFDLWSVPFDGGRGGEARPIEGASNNGLSNVFP 413

Query: 308 SYSPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            YSPD   + F     G       +L ++ + G +   ++ + +       WSP    +A
Sbjct: 414 KYSPDGRWLAFTQCATGLVLQPDARLAIVPAEGGEAHVLAANTKLMNSWHTWSPNSRWLA 473

Query: 363 FTKFSGEKF-AIGVMKKD----GSQERLLVEDSNLQ----APTWSPS 400
           F       F  I +   D     S    L   S+ +     P + P 
Sbjct: 474 FASKGNSPFTEIFLTHIDDDGRSSPPLRLFRFSHAELAAMVPEFIPD 520



 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 6/86 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR--- 248
            L ++  +G     L  +   +     +SPN + +A+A+  +     ++L     D    
Sbjct: 438 RLAIVPAEGGEAHVLAANTKLMNSWHTWSPNSRWLAFASKGNSPFTEIFLTHIDDDGRSS 497

Query: 249 APKRIGNFRSMILA---PRFSSNGKR 271
            P R+  F    LA   P F  +  R
Sbjct: 498 PPLRLFRFSHAELAAMVPEFIPDHAR 523


>gi|168988586|pdb|2ECF|A Chain A, Crystal Structure Of Dipeptidyl Aminopeptidase Iv From
           Stenotrophomonas Maltophilia
 gi|1753197|dbj|BAA11872.1| dipeptidyl peptidase IV [Stenotrophomonas maltophilia]
          Length = 741

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 45/319 (14%), Positives = 95/319 (29%), Gaps = 88/319 (27%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--- 263
            P     L +P+ +P+  +V +    D D  ++ L    I     R+    S ++ P   
Sbjct: 32  LPLSGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLL-VDSKVVLPGTE 90

Query: 264 ------------------------RFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLT 298
                                   ++S + +R L  +     + +Y +  +  A   +LT
Sbjct: 91  TLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPL--GGELYLYDLKQEGKAAVRQLT 148

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----- 353
           +       A  SP    + F   R     L+V+      Q +++ D   +  + +     
Sbjct: 149 HGEGFATDAKLSPKGGFVSFIRGR----NLWVIDLASGRQMQLTADGSTTIGNGIAEFVA 204

Query: 354 -----------WSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAP- 395
                      W+P    IA+ +         +++ +   + D  ++R            
Sbjct: 205 DEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264

Query: 396 --TWSP-------------------------SGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               SP                           + L F R+        L  + L    +
Sbjct: 265 LGVISPAEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLASNQQ 324

Query: 429 TLINTPAYASDPQWVGFMD 447
            ++   A+ + P WV   +
Sbjct: 325 RVL---AHETSPTWVPLHN 340



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 54/335 (16%), Positives = 103/335 (30%), Gaps = 83/335 (24%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD----------RDGAN------IR 204
              + +T  +G      L      VS I   +L V+D           DG+         
Sbjct: 142 AAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTTIGNGIAE 201

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL---RVYLMDTRIDRAPKRIGNFRSMIL 261
           ++            ++P+   +AYA  D+  +    R  +   R D   +R        +
Sbjct: 202 FVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261

Query: 262 APRF---SS-------------------------NGKRALISVQKDEA--MDIYSVDLQS 291
             +    S                          + +      Q  +   +D+  V L S
Sbjct: 262 QVKLGVISPAEQAQTQWIDLGKEQDIYLARVNWRDPQHLSFQRQSRDQKKLDLVEVTLAS 321

Query: 292 NATERLTNTLFINISASYSP--------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           N    L        S ++ P        D   I++ S+R G + LY + S G        
Sbjct: 322 NQQRVL----AHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKG-------- 369

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIGVMKKDGSQERLLVEDSNL 392
            K A+     WS   +L+A  + +G  +            I  +   G Q + L +   +
Sbjct: 370 -KAAALTHGNWSVD-ELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSKAPGM 427

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            + +++ +  S+      +  T  ++     NG  
Sbjct: 428 HSASFARN-ASVYVDSWSNNSTPPQIELFRANGEK 461


>gi|149920392|ref|ZP_01908861.1| peptidase C14, caspase catalytic subunit p20 [Plesiocystis pacifica
            SIR-1]
 gi|149818707|gb|EDM78150.1| peptidase C14, caspase catalytic subunit p20 [Plesiocystis pacifica
            SIR-1]
          Length = 1781

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 77/245 (31%), Gaps = 13/245 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +     ++ + D        +  S +  ++   FSP+ +++A   +       V L D  
Sbjct: 947  TAAWDKTVRIWDAQSGVPLQVLHSDEDKVYAIAFSPDGERLATTHFSR----HVSLWDLA 1002

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +    I       +   F+ +G R        +A      D  +              
Sbjct: 1003 TGQPLPSIDLESFGHIDASFAPDGVRLATGGPSGKAGKAEIWDTSTGERLHELLHDAPVR 1062

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            + ++SPD   +   +  +G   L+   ++                   +SP G+ +A T 
Sbjct: 1063 AVAFSPDGQHLA-TASADGTAALW--DTDSGHDTHAFVHGPGKLHAIRFSPDGERLA-TG 1118

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                   +  +   G           + +  +SP+   L+ +   D D  + L+ I   G
Sbjct: 1119 GQDGYARLWSV-TTGEPLGAFAHGEVVYSVAFSPADPGLLATATMDDD-AAHLWDI---G 1173

Query: 426  RNETL 430
            R   L
Sbjct: 1174 RGLRL 1178



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/258 (17%), Positives = 88/258 (34%), Gaps = 17/258 (6%)

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            +S       F    + ++    SG    +       G  +  L    D  +    FSP+ 
Sbjct: 1013 ESFGHIDASFAPDGVRLATGGPSGKAGKAEIWDTSTGERLHELLH--DAPVRAVAFSPDG 1070

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            Q +A A+ D        L DT          +    + A RFS +G+R   +  +D    
Sbjct: 1071 QHLATASADG----TAALWDTDSGHDTHAFVHGPGKLHAIRFSPDGERLA-TGGQDGYAR 1125

Query: 284  IYSVDLQSNATERLTNTLFINISASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++SV   +           +  S ++SP D   +   +  +    L+ +   G   +  S
Sbjct: 1126 LWSV--TTGEPLGAFAHGEVVYSVAFSPADPGLLATATMDDDAAHLWDI---GRGLRLRS 1180

Query: 343  QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
               + S     +SP GD +A   +      I  +++      L      + A   S  G 
Sbjct: 1181 FRHDNSVDAVAFSPGGDQLATASWDHSA-RIWDVQRGRVSTPLEGHRDAVYAVDVSSDGA 1239

Query: 403  SLIFSRKKDGDTGSKLYS 420
             +  +    GD  ++++ 
Sbjct: 1240 HIATAS---GDNRARIWD 1254



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 89/280 (31%), Gaps = 35/280 (12%)

Query: 130  LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            LWD           F   P     I    S D  + +     D  +R+  V+     G  
Sbjct: 1084 LWDTDSGHD--THAFVHGPGKLHAI--RFSPD-GERLATGGQDGYARLWSVTTGEPLGAF 1138

Query: 190  KNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDTRIDR 248
                               +  ++++   FSP +   +A AT DD+     +L D     
Sbjct: 1139 -------------------AHGEVVYSVAFSPADPGLLATATMDDDAA---HLWDIGRGL 1176

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              +      + + A  FS  G +   +   D +  I+ V  +   +  L        +  
Sbjct: 1177 RLRSF-RHDNSVDAVAFSPGGDQLA-TASWDHSARIWDVQ-RGRVSTPLEGHRDAVYAVD 1233

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             S D + I   S   G  +  +  +  +  +   +          +SP G L+A   + G
Sbjct: 1234 VSSDGAHIATAS---GDNRARIWDAASNHPRLELRGHRLDLDRVRFSPSGRLVATASWDG 1290

Query: 369  EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                +  ++ +     L      ++A  +SP G  L  + 
Sbjct: 1291 TV-RVWDVEAERQLHALDQHRGRVRAVDFSPDGARLATAS 1329



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 51/260 (19%), Positives = 83/260 (31%), Gaps = 47/260 (18%)

Query: 105  SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
            S G   L T               R+WDV+  +            S     H   D +Y 
Sbjct: 1193 SPGGDQLATASWDHSA--------RIWDVQRGRV-----------STPLEGHR--DAVYA 1231

Query: 165  SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                  G            + +    N   + D    + R         L   RFSP+ +
Sbjct: 1232 VDVSSDGAH----------IATASGDNRARIWDAASNHPRLELRGHRLDLDRVRFSPSGR 1281

Query: 225  KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
             VA A++D      V + D   +R    +   R  + A  FS +G R   +   D ++ +
Sbjct: 1282 LVATASWDG----TVRVWDVEAERQLHALDQHRGRVRAVDFSPDGARLA-TASVDHSVRV 1336

Query: 285  YSVDLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +  D+ S A  R +      +   A   PD   ++ +S      QL   +    +Q  + 
Sbjct: 1337 W--DVASGAM-RTSQGFGGPVEDVAFLEPDVVLVLTQS-----RQLARWKLGTGEQTPL- 1387

Query: 343  QDKEASYFDPVWSPQGDLIA 362
              +         SP G  IA
Sbjct: 1388 FPELGPITAVRVSPSGQRIA 1407



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 51/144 (35%), Gaps = 13/144 (9%)

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             + +YSPD + +         + + +  +      ++    E   +   +SP G+ +A T
Sbjct: 934  TALAYSPDGTLLA---TAAWDKTVRIWDAQSGVPLQVLHSDEDKVYAIAFSPDGERLATT 990

Query: 365  KFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             FS     + +      Q    + +E       +++P G  L           ++++   
Sbjct: 991  HFSR---HVSLWDLATGQPLPSIDLESFGHIDASFAPDGVRLATGGPSGKAGKAEIWDTS 1047

Query: 423  LNGRNETLINTP-----AYASDPQ 441
               R   L++       A++ D Q
Sbjct: 1048 TGERLHELLHDAPVRAVAFSPDGQ 1071


>gi|113968952|ref|YP_732745.1| peptidase S9 prolyl oligopeptidase [Shewanella sp. MR-4]
 gi|113883636|gb|ABI37688.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sp. MR-4]
          Length = 826

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 81/226 (35%), Gaps = 13/226 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++  +A    ++          T+  R  + + ++     A ++  +  +  + V+  + 
Sbjct: 337 DEDVLAKVKSENAKAKGESYQSTKAPRKIQLMQDWGWTQSAIQWHESENKLAVMVEATDN 396

Query: 282 MDIYSVDLQSNATERLTNTLFINISAS--------YSPDSSQIVFESDREGKEQLYVMQS 333
            D +   +     + +T     + +          + P +  + + S+  G  QLY+ ++
Sbjct: 397 KDRWIASVDLAKGKFITEHRLHDDAWVNYDYNQFGWLPGTDTLYYLSEETGYSQLYI-KA 455

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSN 391
            G   + ++Q K     D   SP  + I +         + +  +     +   L +   
Sbjct: 456 RGEKPRALTQGKFV-VSDITLSPDANYIYYKANQSHPGIYNVHRVNIASGKNEQLTQWDG 514

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               + SP G  L+ +  +     ++LY   + G  + L +  + A
Sbjct: 515 NLDYSLSPDGTKLLLNASRR-TAPNELYVQPIGGELKQLTSYTSDA 559



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 60/173 (34%), Gaps = 13/173 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSR-------DQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
               +   D A  +++T  R       +    +  + P    + Y + +        L  
Sbjct: 397 KDRWIASVDLAKGKFITEHRLHDDAWVNYDYNQFGWLPGTDTLYYLSEETG---YSQLYI 453

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
                 P+ +   + ++     S +         +      +++ V++ S   E+LT   
Sbjct: 454 KARGEKPRALTQGKFVVSDITLSPDANYIYYKANQSHPGIYNVHRVNIASGKNEQLTQWD 513

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             N+  S SPD ++++  + R        +Q  G + K+++     ++    W
Sbjct: 514 G-NLDYSLSPDGTKLLLNASRRTAPNELYVQPIGGELKQLTSYTSDAFKQYPW 565


>gi|327314136|ref|YP_004329573.1| peptidase, S9A/B/C family, catalytic domain-containing protein
           [Prevotella denticola F0289]
 gi|326945282|gb|AEA21167.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           denticola F0289]
          Length = 710

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 50/374 (13%), Positives = 118/374 (31%), Gaps = 87/374 (23%)

Query: 144 FFSSPASWRKIAHTI-SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           +        ++   + +D     +        S  +++ ++ ++ +    L  M  DG +
Sbjct: 60  YSVKENKGHQVLRIMDADGRNDRLLTTSAANESDAVWLDDNTLAFLTGGQLWTMKADGTD 119

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVA----------------------------------- 227
            R LT S   I    RFSP++++V                                    
Sbjct: 120 RRQLTRSDIDIEGF-RFSPDRRRVVLIKSIPYYGTIRQNPSDLPKATGMVITDMNYRHWD 178

Query: 228 -YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-------RFSSNGKRALISVQKD 279
            Y T +    +         D      G      LAP        +S + K    + +K 
Sbjct: 179 HYVTANAHPFVADVTAGGIGDGVDVLEGEPYESPLAPFGGIEQIDWSRDSKSVAYTCRKK 238

Query: 280 EAM--------DIYSVDLQSNATERL-------------TNTL--------------FIN 304
           E          DIY  ++++  T+ L             T ++                +
Sbjct: 239 EGTQYAISTDADIYIYNVETRRTKNLCKPEGYVEPKIDATKSMRDQAVNHQAGDMNVGYD 298

Query: 305 ISASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           ++  +SPD   I ++S         + +L V +     +  +++  +++  +  W     
Sbjct: 299 VNPKFSPDGRYIAWQSMKNNGYESDRNRLCVYELATGRKTYVTESFDSNVDEYTWGADSK 358

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           ++ F         I      G + + L E  +    + +  G   + + ++     +++Y
Sbjct: 359 VLYFIGVWHATENIYQTSLKG-EVKQLTE-GDHNYVSIALLGDRKLLAIRQSLSQANEIY 416

Query: 420 SIDLNGRNETLINT 433
           ++    + +T + T
Sbjct: 417 AVTPARKEKTSLQT 430



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 79/242 (32%), Gaps = 64/242 (26%)

Query: 258 SMILAPRFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             I A + S +G+R +  V      +      +  +D        LT +      A +  
Sbjct: 39  GRIGAAQASPDGRRIVYQVGYYSVKENKGHQVLRIMDADGRNDRLLTTSAANESDAVWL- 97

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--------- 362
           D + + F +      QL+ M+++G+D++++++  +       +SP    +          
Sbjct: 98  DDNTLAFLT----GGQLWTMKADGTDRRQLTR-SDIDIEGFRFSPDRRRVVLIKSIPYYG 152

Query: 363 ---------------------------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                                      +   +   F   V          ++E    ++P
Sbjct: 153 TIRQNPSDLPKATGMVITDMNYRHWDHYVTANAHPFVADVTAGGIGDGVDVLEGEPYESP 212

Query: 396 ----------TWSPSGRSLIFS-RKKDGD-----TGSKLYSIDLNGRNETLINTPAYASD 439
                      WS   +S+ ++ RKK+G      T + +Y  ++  R    +  P    +
Sbjct: 213 LAPFGGIEQIDWSRDSKSVAYTCRKKEGTQYAISTDADIYIYNVETRRTKNLCKPEGYVE 272

Query: 440 PQ 441
           P+
Sbjct: 273 PK 274



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 77/246 (31%), Gaps = 23/246 (9%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRI 253
           RD A               P+FSP+ + +A+ +  +     D  R+ + +    R     
Sbjct: 282 RDQAVNHQAGDMNVGYDVNPKFSPDGRYIAWQSMKNNGYESDRNRLCVYELATGRKTYVT 341

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +F S +    + ++ K            +IY   L+    ++LT      +S +   D 
Sbjct: 342 ESFDSNVDEYTWGADSKVLYFIGVWHATENIYQTSLK-GEVKQLTEGDHNYVSIALLGDR 400

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +          ++Y +     ++  +             S +   I      GE    
Sbjct: 401 KLLAIRQSLSQANEIYAVTPARKEKTSLQT---------QLSFENKHIYDQLALGEVHDR 451

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            V   DG + +  V       P + P+ +   L+F         S+ +S      N  ++
Sbjct: 452 WVKTTDGKEMQEWVVTP----PHFDPNRKYPALLFCEGGPQSPVSQFWSYRW---NLQIM 504

Query: 432 NTPAYA 437
               Y 
Sbjct: 505 AANGYV 510


>gi|255035736|ref|YP_003086357.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Dyadobacter fermentans DSM 18053]
 gi|254948492|gb|ACT93192.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Dyadobacter fermentans DSM 18053]
          Length = 787

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 53/332 (15%), Positives = 105/332 (31%), Gaps = 38/332 (11%)

Query: 127 EFRLWDVKDR---KQIIGKKFFSSPASWRKIAHTISD-DIYQSITGEKGDFNS-RILFVS 181
           +  L++V      K+  GKK   +    R     +SD +I        G F + R+    
Sbjct: 190 QLALFEVLKERKEKKDAGKKITDADKPARPKEIYLSDKNISNQQLSPDGLFVTYRLTKAD 249

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +S  S  + N +         I   T           +  + +K         DI  +Y 
Sbjct: 250 KSAKSTEVPNYVTESGFT-EEIPARTKVGAPAAEVEFWVYDVKKDTARKVAATDIPGIYD 308

Query: 242 MDTRIDRAPKRIGNFRSMIL-----APRFSSNGKRALISVQKDEAMDIYSV--DLQSNAT 294
               +   PK     +          P +S NG++A++ V+  ++ D + +  D  + + 
Sbjct: 309 KPDYLKDYPKSDTASKKKERKVIFHGPFWSDNGQQAVVVVRSLDSKDRWIMAFDPAALSL 368

Query: 295 ERLTNTLFINISASYSP-----------------DSSQIVFESDREGKEQLYVMQSNGSD 337
           + L          ++                   D+  I F+S+  G   LY    +   
Sbjct: 369 KLL----DRQRDEAWIGGPGIGGYPQSAGEIGWLDNQTIYFQSETTGYSHLYTFNISTGK 424

Query: 338 QKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +  ++  +     + V S       +   +    +  +  +   G     L +       
Sbjct: 425 KTALTSGRF-EVQNVVLSKDKKTFYLITNEVHPGEQHVYRVAAAGGARTRLTQTPGAHEM 483

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           T SP  + L   R     +  +LY +D  G  
Sbjct: 484 TLSPDEKHLA-IRFSQSTSPWELYLLDNTGAK 514



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 63/175 (36%), Gaps = 20/175 (11%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--REGK 325
           + +      +      +Y+ ++ +     LT+  F   +   S D       ++    G+
Sbjct: 399 DNQTIYFQSETTGYSHLYTFNISTGKKTALTSGRFEVQNVVLSKDKKTFYLITNEVHPGE 458

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQ-- 382
           + +Y + + G  + R++Q   A   +   SP    +A     S   + + ++   G++  
Sbjct: 459 QHVYRVAAAGGARTRLTQTPGA--HEMTLSPDEKHLAIRFSQSTSPWELYLLDNTGAKNA 516

Query: 383 -ERLLVEDSNLQAPTW-----------SPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               +    + +  ++           +  G+ + ++R  +    +    I ++G
Sbjct: 517 APLQITHSVSPEFCSYPWREAKVVTVKAGDGQDI-YARVYEPKQSNGKAVIFVHG 570



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/136 (14%), Positives = 51/136 (37%), Gaps = 15/136 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++ + + V +    D++        +   +   ++         P     GK  + +  
Sbjct: 47  TWADDSKTVYFKWNPDKNPADSLYGYSLSGKKISKVPPADRR-RMP-----GKNGIYNRS 100

Query: 278 KDE-----AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +         DI+ V+ +  +  +LTNT       ++S D + ++FE D    + L+ + 
Sbjct: 101 RTMRLYEKNGDIFIVNYKDFSIRQLTNTTERETEPAFSGDENSVIFERD----DNLFSVA 156

Query: 333 SNGSDQKRISQDKEAS 348
            N     + +  K+ +
Sbjct: 157 LNSGLISQRTDFKKGT 172


>gi|32471820|ref|NP_864814.1| vegetatible incompatibility protein HET-E-1 [Rhodopirellula baltica
           SH 1]
 gi|32397191|emb|CAD72498.1| probable vegetatible incompatibility protein HET-E-1
           [Rhodopirellula baltica SH 1]
          Length = 1785

 Score = 63.5 bits (153), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 56/152 (36%), Gaps = 14/152 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP++Q +A A Y +     + L+D +      R+      I + RFS +G R   +    
Sbjct: 182 SPDEQTLAIAGYHE-----ICLLDAKSGEMQTRLVGISPRINSVRFSPDGSRIAAAGGMP 236

Query: 280 EAMDIYSV-DLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +    + +  +       ++T         S+SPD S+I   ++      +  + S  
Sbjct: 237 GELGELQIWNASTGKLELSRQITYDT--ITGLSWSPDGSKIAIGAN---DNTVRALDSAT 291

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +Q       E    D V++P G  +      
Sbjct: 292 GEQVLFQGAHEDWIRDTVFTPDGKHLVSVARD 323



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 81/263 (30%), Gaps = 48/263 (18%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +C++D     ++         +   RFSP+  ++A A     ++  + + +    +   
Sbjct: 195 EICLLDAKSGEMQTRLVGISPRINSVRFSPDGSRIAAAGGMPGELGELQIWNASTGKLEL 254

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
                   I    +S +G +  I    +    + ++D  +   + L      +      +
Sbjct: 255 SRQITYDTITGLSWSPDGSKIAIGANDN---TVRALDSATG-EQVLFQGAHEDWIRDTVF 310

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWS---------- 355
           +PD   +V  +      +    +    + +R    ++     +    + S          
Sbjct: 311 TPDGKHLVSVA------RDMTCKLTEVETERFIDNVTSITPGALSGGLSSVAMHPSRDEI 364

Query: 356 ----PQGDLIAFTKFSGEKFAIG--------VMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                 G    +  F   K  IG        + + +G   +++V  +          G  
Sbjct: 365 VVGGSDGVTKVYRVFRQTKRQIGDDANLVRNLPRLNGRIRQVVVNSA----------GTH 414

Query: 404 LIFSRKKDGDTGSKLYSIDLNGR 426
           L      DG +  +++  D  G 
Sbjct: 415 LAAVATIDGHSELRVWKYDFTGE 437


>gi|298711422|emb|CBJ32563.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 531

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 7/144 (4%)

Query: 182 ESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    +L + +  DG           Q +    FSP+ ++ A A++D +    V 
Sbjct: 387 ERLVSGSDDFTLFLWNPVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASFDKK----VK 442

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D R       +    S +    +S++  R L+S  KD  + ++ +     A   L   
Sbjct: 443 VWDGRTGTFLATLNGHVSAVYQVAWSAD-SRLLVSASKDSTVKLWEMVALKRAKATLPGH 501

Query: 301 LFINISASYSPDSSQIVFES-DRE 323
                +  +SPD S +   S DR 
Sbjct: 502 ADEVYALDWSPDGSAVASGSKDRT 525



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 48/149 (32%), Gaps = 8/149 (5%)

Query: 273 LISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           L+S   D  + +++  +       RLT         ++SPD  +    S     +++ V 
Sbjct: 389 LVSGSDDFTLFLWN-PVDGKKPLARLTGHQQPVNHLAFSPDGRRFASASF---DKKVKVW 444

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                          ++ +   WS    L+             ++    ++  L      
Sbjct: 445 DGRTGTFLATLNGHVSAVYQVAWSADSRLLVSASKDSTVKLWEMVALKRAKATLPGHADE 504

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + A  WSP G ++        D   K+++
Sbjct: 505 VYALDWSPDGSAVA---SGSKDRTIKIWA 530



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/194 (11%), Positives = 58/194 (29%), Gaps = 15/194 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                  P   + +    +SP+   +A         + V   D +           R  +
Sbjct: 145 TRCTSTMPGHTEAVLHVNYSPDGTMLA----SGGGDMTVRFWDVQTSLPRFTCRGHRHHV 200

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP-----DSSQ 315
           L   ++ NGKR   S  +   + ++         + L+       S ++ P        +
Sbjct: 201 LCTAWAPNGKRFA-SADRKGEIRLWDPSKGVQQGQPLSAHKQWVTSLAWEPLHRNSAGER 259

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +   S       + +  +     +        S    +W   G+ + ++        +  
Sbjct: 260 LASSSK---DALIKIWNTRTGRCEVTLSGHADSVEKIIW--GGEGLLYSASRDRTIKVWN 314

Query: 376 MKKDGSQERLLVED 389
           ++ +G +  +LV  
Sbjct: 315 VEGEGRKLGILVRT 328


>gi|300726586|ref|ZP_07060027.1| conserved hypothetical protein [Prevotella bryantii B14]
 gi|299776118|gb|EFI72687.1| conserved hypothetical protein [Prevotella bryantii B14]
          Length = 581

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 97/322 (30%), Gaps = 37/322 (11%)

Query: 128 FRLWDVKDRKQIIGKKF--FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
            +L+D+   +    K F  F+       + H +   I + +  E    + +  + SE   
Sbjct: 270 MQLYDL-TAEFCHSKTFPFFAHDEHMNVVGHQL---IAERLVKEMSSISGKYEYQSE--- 322

Query: 186 SGIIKNSLCVMDRDGA-------------NIRYLTPSRDQILF-------EPRFSPNQQK 225
            G        +  DG              N   +     + L+        P  S + + 
Sbjct: 323 -GNFHERYPTLHADGTMVYQSQTEHYYTINRLNINNGNREELWRGVSELVHPMISSDGRY 381

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMD 283
           + +   + E +    ++   +      I    +    P  S +  +         +    
Sbjct: 382 LVFTEGEQESLNTDVVLYDFLKNNQIAINKKPTKGSIPCISKSATKIAYPCWTLDETIPQ 441

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRIS 342
           I   D+ +    +  + +       +S D   I +           + Q +  + +K I 
Sbjct: 442 IAIYDIATGKQTQFKDGV-ECWRPLFSNDECYIYYIQKETHDSHFIIKQYDVTTGEKSIV 500

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSG 401
             +    +D   SP G  IA+       + + +   +    R +     +   P +  S 
Sbjct: 501 LKQPFDIWDIAVSPSGKYIAYAGNKDANWDLFIYDTEHKHSRQITHTIGDEWDPAFGVSD 560

Query: 402 RSLIFSRKKDGDTGSKLYSIDL 423
             L F+     + G  +Y + L
Sbjct: 561 DELWFAGVFGFNDG--IYHVRL 580



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 79/234 (33%), Gaps = 15/234 (6%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P    +   V       E    +  ++   +   + +    S ++ P  SS+G+  + +
Sbjct: 329 YPTLHADGTMV--YQSQTEHYYTINRLNIN-NGNREELWRGVSELVHPMISSDGRYLVFT 385

Query: 276 V--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQLYV 330
              Q+    D+   D   N    +            S  +++I +     D     Q+ +
Sbjct: 386 EGEQESLNTDVVLYDFLKNNQIAINKKPTKGSIPCISKSATKIAYPCWTLDET-IPQIAI 444

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERL-LV 387
                  Q +     E   + P++S     I + +       F I        ++ + L 
Sbjct: 445 YDIATGKQTQFKDGVE--CWRPLFSNDECYIYYIQKETHDSHFIIKQYDVTTGEKSIVLK 502

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +  ++     SPSG+ + ++  KD +    +Y  + +  +  + +T     DP 
Sbjct: 503 QPFDIWDIAVSPSGKYIAYAGNKDANWDLFIYDTE-HKHSRQITHTIGDEWDPA 555


>gi|253688271|ref|YP_003017461.1| Oligogalacturonide lyase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251754849|gb|ACT12925.1| Oligogalacturonide lyase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 388

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 66/183 (36%), Gaps = 32/183 (17%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 ++   +  ++ DG N+R +    +        + P+   + Y +Y  +D  R  
Sbjct: 207 HEGPHDLVDARMWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDSNRYI 266

Query: 241 LMDTRIDRAPKRI----------GNFRSMILAPRFSSNGKRALISVQKDEAMDI------ 284
                +    +++           N+   +L      +G  A + VQ D    I      
Sbjct: 267 RSIDPVTLEDRQLRVMPPCSHLMSNYDGTLLVG----DGSDAPVDVQDDGGYKIENDPFL 322

Query: 285 YSVDLQSNATERLTNTL-FINI----------SASYSPDSSQIVFESDREGKEQLYVMQS 333
           Y  +L++    R+        +            S++PD+ Q++F SD +GK  LY+ + 
Sbjct: 323 YVFNLKTGKEHRIAQHNTSWEVLEGDRQVTHPHPSFTPDNKQVLFTSDVDGKPALYLAKV 382

Query: 334 NGS 336
             S
Sbjct: 383 PDS 385



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/227 (8%), Positives = 64/227 (28%), Gaps = 35/227 (15%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MD 283
           +  +   +     +    +    + I      +  P +   +        +         
Sbjct: 158 FQEFYFTNPCCRLIRVDLVTGEAQTILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDAR 217

Query: 284 IYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQK 339
           ++ ++       ++             + PD S +++ S    +    +  +     + +
Sbjct: 218 MWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDSNRYIRSIDPVTLEDR 277

Query: 340 RISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMKK-DGSQERL 385
           ++      S+    +   G L+                + I       V     G + R+
Sbjct: 278 QLRVMPPCSHLMSNY--DGTLLVGDGSDAPVDVQDDGGYKIENDPFLYVFNLKTGKEHRI 335

Query: 386 LVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +++ +            P+++P  + ++F+   DG     L  +
Sbjct: 336 AQHNTSWEVLEGDRQVTHPHPSFTPDNKQVLFTSDVDGKPALYLAKV 382



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 64/189 (33%), Gaps = 28/189 (14%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKE 326
           +G + L     D   + Y +DL+  +  +LT     N    + SP+   + +  +     
Sbjct: 46  DGSKLLFGAAFDGPWNYYLLDLKEQSATQLTEGKGDNTFGGFLSPNDDALYYVKN---TR 102

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFA------------ 372
            L  +     ++K I Q  +       W    D   +   +   E +             
Sbjct: 103 NLMRVDLATLEEKTIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFY 162

Query: 373 --------IGVMKKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSID 422
                   I V    G  + +L E+  L  P + P    ++ F  +   D   ++++ I+
Sbjct: 163 FTNPCCRLIRVDLVTGEAQTILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFIN 222

Query: 423 LNGRNETLI 431
            +G N   +
Sbjct: 223 EDGTNMRKV 231



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 76/240 (31%), Gaps = 34/240 (14%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F  +  K+ +     +     YL+D +   A +              S N   
Sbjct: 36  NYFYQKCFFNDGSKLLFGA-AFDGPWNYYLLDLKEQSATQLTEGKGDNTFGGFLSPNDDA 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASY--SPDSSQIV----------- 317
                      ++  VDL +   + +       +   ++  + D +++V           
Sbjct: 95  LYYVKN---TRNLMRVDLATLEEKTIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKP 151

Query: 318 ------FESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
                 F+         +L  +     + + I Q+ +     P++ P   + +AF     
Sbjct: 152 LTDWKKFQEFYFTNPCCRLIRVDLVTGEAQTILQENQW-LGHPIYRPGDDNTVAFCHEGP 210

Query: 369 EKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DG+  R +    E  +     W P G ++I+      D+   + SID
Sbjct: 211 HDLVDARMWFINEDGTNMRKVKEHAEGESCTHEFWVPDGSAMIYVSYLKDDSNRYIRSID 270



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 37/115 (32%), Gaps = 5/115 (4%)

Query: 281 AMDIYSVDLQSNATERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               Y          RLT               +  D S+++F +  +G    Y++    
Sbjct: 10  TFHTYQDSATGTEVVRLTPPDVICHRNYFYQKCFFNDGSKLLFGAAFDGPWNYYLLDLKE 69

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
               ++++ K  + F    SP  D + + K +     + +   +      + +D 
Sbjct: 70  QSATQLTEGKGDNTFGGFLSPNDDALYYVKNTRNLMRVDLATLEEKTIYQVPDDW 124


>gi|119474119|ref|XP_001258935.1| WD domain protein [Neosartorya fischeri NRRL 181]
 gi|119407088|gb|EAW17038.1| WD domain protein [Neosartorya fischeri NRRL 181]
          Length = 414

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 64/202 (31%), Gaps = 34/202 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +AY            L D    R   R+     M     FS+NG+        
Sbjct: 174 FSPDGKSIAY-------PGSASLWDPMTGRERIRLQGSLVMSEPIAFSTNGRLVA----S 222

Query: 279 DEAMDIYSVDLQSNATERLTNTLF----INISA----SYSPDSSQIVFESDREGKEQLYV 330
             +  I   D  + A  +          I        ++SPD    +  S     + + +
Sbjct: 223 GHSTAINVWDTSTGAQRQRLIKPGSEKNIETDTIKHIAFSPDPDSKILAS-ASWWKTVTL 281

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             ++    +RI     A      +SP   L+A     G    I + +     ER     S
Sbjct: 282 WNTSTWTVQRILDVSAAYVHHVAFSPDSKLLATASIDG---RIRLWEVVTGSER----PS 334

Query: 391 NLQAPT-------WSPSGRSLI 405
               P+       +SP GR + 
Sbjct: 335 LQTRPSCVSYCVEFSPDGRFIA 356



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 25/147 (17%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +GK       +     +   D  ++    + T       S  +SPD   I +     
Sbjct: 132 FSPDGKWLA---SRSYDKTMRIRDAGTSTQLIQFTTAYAYLSSTPFSPDGKSIAY----P 184

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           G   L+      + ++RI         +P  +S  G L+A    SG   AI V       
Sbjct: 185 GSASLW---DPMTGRERIRLQGSLVMSEPIAFSTNGRLVA----SGHSTAINVWDTSTGA 237

Query: 383 ERLL---------VEDSNLQAPTWSPS 400
           +R           +E   ++   +SP 
Sbjct: 238 QRQRLIKPGSEKNIETDTIKHIAFSPD 264



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 17/126 (13%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFS 367
           +SPD   +     R   + + +  + G+  + I      +Y     +SP G  IA+    
Sbjct: 132 FSPDGKWLA---SRSYDKTMRIRDA-GTSTQLIQFTTAYAYLSSTPFSPDGKSIAY---- 183

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               ++        +ER+ ++ S + +    +S +GR +         T   ++      
Sbjct: 184 PGSASLW--DPMTGRERIRLQGSLVMSEPIAFSTNGRLVA----SGHSTAINVWDTSTGA 237

Query: 426 RNETLI 431
           + + LI
Sbjct: 238 QRQRLI 243


>gi|322693638|gb|EFY85491.1| WD repeat-containing protein, putative [Metarhizium acridum CQMa
           102]
          Length = 1148

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 77/226 (34%), Gaps = 14/226 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y        +    +S   + +A A+ D      + L D       + +      +L   
Sbjct: 178 YTLKGHGASVNAVAYSSRHKVLASASSDR----TIRLWDDVAGAHKRTLQGHSGYVLDVA 233

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G     S   D  + I+ VD + +    L        S ++  DS+     SD  G
Sbjct: 234 FSPDGNTLA-SASSDGTVWIWGVD-KGSHIRTLEGHSSWVNSVAFLSDSTLASASSD--G 289

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             +L+    +    K   +           +  G ++A +  S     +    K+   + 
Sbjct: 290 TVRLW--DISEGICKDTDKSHNGPVNSVASARNGMVLA-SGSSDRTVHVWNFAKEPYNQE 346

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +L  D  + A ++SP G  L       G+   +++  D   +  TL
Sbjct: 347 ILSHDGPVTAVSFSPDGDLLA---SASGNWTVRVWHADTRSQVRTL 389



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 89/289 (30%), Gaps = 54/289 (18%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAY 228
           +G + +  +F++E  V     +   +   DG           D  +    FSP+   +A 
Sbjct: 432 RGGWLNSTVFLAERNVLVAASSDRTLRVLDGIIGGAEKMCGHDGPVNAVVFSPDGTWLAS 491

Query: 229 ATYD---------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            + D             +R      RI    + I N+   IL+  FS NGK    S   D
Sbjct: 492 TSSDWTVRLWNAGQGTCVRTIHHQKRITEDQRTIDNYSCYILSIAFSPNGKIIA-SGCSD 550

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA-----------------------SYSPDSSQI 316
            ++ ++ VD +    + LT                                ++SPD   I
Sbjct: 551 WSIRLWDVD-KGTLIKTLTYKNPPPKPPNPSTPLTGKALTPEDQGRFVLAIAFSPDGMMI 609

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              S  + + +L+      +      +          +S  G L+A     G  +   V 
Sbjct: 610 ASGSS-DWRVRLWNTFDKYTFALATLEGHRNWVRAVAFSTDGKLLASASTDGMLWLWDVE 668

Query: 377 KKDGSQERL------------------LVEDSNLQAPTWSPSGRSLIFS 407
           K++                          +   ++   +SP G+ L ++
Sbjct: 669 KRNNGTSIYEDSASNILRERCCDVNESTHQQDWVRTVAFSPDGKELAWA 717



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 72/224 (32%), Gaps = 15/224 (6%)

Query: 170 KGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            G   + + + S   V  S     ++ + D      +         + +  FSP+   +A
Sbjct: 183 HGASVNAVAYSSRHKVLASASSDRTIRLWDDVAGAHKRTLQGHSGYVLDVAFSPDGNTLA 242

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            A+ D      V++         + +    S + +  F S+    L S   D  + ++  
Sbjct: 243 SASSDG----TVWIWGVDKGSHIRTLEGHSSWVNSVAFLSDST--LASASSDGTVRLW-- 294

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D+     +  T+        S +   + +V  S    +  ++V         +     + 
Sbjct: 295 DISEGICKD-TDKSHNGPVNSVASARNGMVLASGSSDRT-VHVWNFAKEPYNQEILSHDG 352

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                 +SP GDL+A        + + V   D   +   +E   
Sbjct: 353 PVTAVSFSPDGDLLASAS---GNWTVRVWHADTRSQVRTLEGYR 393



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 66/198 (33%), Gaps = 28/198 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE-KGD 172
           G++I  G     +  RLWDV     I    + + P      +   +    +++T E +G 
Sbjct: 541 GKIIASGCSDWSI--RLWDVDKGTLIKTLTYKNPPPKPPNPS---TPLTGKALTPEDQGR 595

Query: 173 FNSRILF----VSESVVSGIIKNSLC-VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           F   I F    +  +  S   +  L    D+    +  L   R+ +     FS + + +A
Sbjct: 596 FVLAIAFSPDGMMIASGSSDWRVRLWNTFDKYTFALATLEGHRNWVRAV-AFSTDGKLLA 654

Query: 228 YATYD----------DEDILRVYLMDTRIDRAPK-----RIGNFRSMILAPRFSSNGKRA 272
            A+ D            +   +Y          +        + +  +    FS +GK  
Sbjct: 655 SASTDGMLWLWDVEKRNNGTSIYEDSASNILRERCCDVNESTHQQDWVRTVAFSPDGKEL 714

Query: 273 LISVQKDEAMDIYSVDLQ 290
             ++  D  +    +D  
Sbjct: 715 AWALT-DGTVSFLPLDFD 731


>gi|168177180|pdb|2Z3W|A Chain A, Prolyl Tripeptidyl Aminopeptidase Mutant E636a
 gi|168177181|pdb|2Z3Z|A Chain A, Prolyl Tripeptidyl Aminopeptidase Mutant E636a Complexd
           With An Inhibitor
          Length = 706

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 91/276 (32%), Gaps = 50/276 (18%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANI----RYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           L+++     G   +    +  DG       + +      I     +SP    +A+   D 
Sbjct: 143 LYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ 202

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPR----------------------------- 264
             +    ++D     A  +   +  M   P                              
Sbjct: 203 SMVKPTPIVDYHPLEAESKPLYYP-MAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLT 261

Query: 265 ---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----SA----SYSPD 312
              +S + +  L   + + A +   V+     T R   TLF+             ++ P 
Sbjct: 262 NLSWSPD-ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPG 320

Query: 313 SS-QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGE 369
           S+ Q +++S R+G   LY+  + G   +++++ +        + P+G  + F     S  
Sbjct: 321 SNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPL 380

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +     +   G + + L  +S +     SP G ++I
Sbjct: 381 ERHFYCIDIKGGKTKDLTPESGMHRTQLSPDGSAII 416



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 57/169 (33%), Gaps = 17/169 (10%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEP--- 217
           + +T      +  IL+V+E       +N   V   D   G  +R L    D+   EP   
Sbjct: 258 KFLTNLSWSPDENILYVAEV---NRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314

Query: 218 -RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALIS 275
             F P      +      D      +     R  +++      +     F   G R    
Sbjct: 315 LTFLP-GSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFE 373

Query: 276 VQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--VFES 320
             +        Y +D++   T+ LT    ++ +   SPD S I  +F+S
Sbjct: 374 STEASPLERHFYCIDIKGGKTKDLTPESGMHRT-QLSPDGSAIIDIFQS 421


>gi|145524131|ref|XP_001447896.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124415423|emb|CAK80499.1| unnamed protein product [Paramecium tetraurelia]
          Length = 892

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 62/186 (33%), Gaps = 9/186 (4%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +    + + +    +   R+ +          S +G              +   +L++  
Sbjct: 260 QRGKFINVWNINRGKLQFRLQDPSGSAYLISLSPDGTTLA---SVHGKNHLLLWNLKTRK 316

Query: 294 TERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            + + N     +S+  +SP+S+ +VF      K  +++         +            
Sbjct: 317 NKNILNGEIGEVSSVCFSPNSNTLVFSI----KNIIHLWDVKLQKHTQFECPTNH-VSSI 371

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP G+ +    +   +     +     Q ++  E   + +  +SP G+  IF   ++ 
Sbjct: 372 CFSPDGNTLTSGSYRDTQINFWDVTTLKHQLKISTEPGWVSSMCFSPDGQLYIFVGCENR 431

Query: 413 DTGSKL 418
            T   +
Sbjct: 432 STKISI 437



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 94/242 (38%), Gaps = 31/242 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              NS+ + D +    +      DQ +    FS + + +A  ++D      +   + +  
Sbjct: 501 SEDNSIILWDANTGQKKSQLNGHDQGVISICFSYDGKGIASGSWDK----TIRFWNVKSG 556

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +   ++      + A  FS +GK    S   DE++ ++ +  ++   + L N     I+A
Sbjct: 557 KQKSKLDGHEDGVSAICFSRDGKTLA-SGSLDESIRLWGI--KTRKQKCLLNESDKLITA 613

Query: 308 SY----SPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            Y    +P   +   ES R  K     LYV++         +Q          +SP  ++
Sbjct: 614 EYYNLHNPCGKRR--ESGRWEKYDRLCLYVLK---------TQGHNHEITSLCFSPVENI 662

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-KLY 419
           +A +    +   +  +KK   + +L      +Q   +SP G    F+    G+  S +L+
Sbjct: 663 LA-SSSKDKTIILWDIKKRAPKIQLCGHTDAVQTVCFSPDG----FTLASGGNDNSIRLW 717

Query: 420 SI 421
            I
Sbjct: 718 DI 719



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 60/192 (31%), Gaps = 16/192 (8%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     + V + +   +++         +    SP+   +A           + L + + 
Sbjct: 259 GQRGKFINVWNINRGKLQFRLQDPSGSAYLISLSPDGTTLASVH----GKNHLLLWNLKT 314

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFI 303
            +    +      + +  FS N    + S++      I+  D++     +    TN +  
Sbjct: 315 RKNKNILNGEIGEVSSVCFSPNSNTLVFSIKN----IIHLWDVKLQKHTQFECPTNHVS- 369

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S  +SPD + +   S R+   Q+          +     +        +SP G L  F
Sbjct: 370 --SICFSPDGNTLTSGSYRD--TQINFWDVTTLKHQLKISTEPGWVSSMCFSPDGQLYIF 425

Query: 364 TKFSGEKFAIGV 375
                    I +
Sbjct: 426 VGCENRSTKISI 437



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 69/221 (31%), Gaps = 45/221 (20%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK-------- 270
           FSP+   +   +Y D    ++   D    +   +I      + +  FS +G+        
Sbjct: 373 FSPDGNTLTSGSYRD---TQINFWDVTTLKHQLKISTEPGWVSSMCFSPDGQLYIFVGCE 429

Query: 271 ----------------RALISV-------QKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                           +   S+         D+ + ++ V  +     +L          
Sbjct: 430 NRSTKISIKWTQLSSLQICFSINGILASCSSDKTIHLWDVKARE-QMYQLDGHNSGVAQV 488

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD S +   S+      + +  +N   +K      +       +S  G  IA   + 
Sbjct: 489 CFSPDLSILASCSE---DNSIILWDANTGQKKSQLNGHDQGVISICFSYDGKGIASGSWD 545

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLI 405
                  V  K G Q+  L  D +    +   +S  G++L 
Sbjct: 546 KTIRFWNV--KSGKQKSKL--DGHEDGVSAICFSRDGKTLA 582



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 52/142 (36%), Gaps = 8/142 (5%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V   + S     ++ + D      +         +    FSP+     +      +   +
Sbjct: 659 VENILASSSKDKTIILWDIKKRAPKIQLCGHTDAVQTVCFSPDG----FTLASGGNDNSI 714

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLT 298
            L D +      ++     ++ +  FS +G   L S   D+++ ++  D+Q+   + +L 
Sbjct: 715 RLWDIKTGFEKFKLLGHVDLVSSLCFSPDGT-ILASGSWDKSIRLW--DIQTQQEKYQLK 771

Query: 299 NTLFINISASYSPDSSQIVFES 320
               +  S  +S + +++   S
Sbjct: 772 GHNNLVHSVCFSSNGTKLASCS 793



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 57/152 (37%), Gaps = 9/152 (5%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           S I +  FS NG  A++    D  ++++ +  +     +L   +   I    S   +   
Sbjct: 199 SSISSVCFSPNG--AILMSSSDSYINLWDI-KKGKKHSQLKCRIGY-IKLLLSNSLNSCT 254

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S  +  + + V   N    +   QD   S +    SP G  +A       K  + +  
Sbjct: 255 LASYGQRGKFINVWNINRGKLQFRLQDPSGSAYLISLSPDGTTLASVH---GKNHLLLWN 311

Query: 378 KDGSQERLLVED--SNLQAPTWSPSGRSLIFS 407
               + + ++      + +  +SP+  +L+FS
Sbjct: 312 LKTRKNKNILNGEIGEVSSVCFSPNSNTLVFS 343


>gi|261199550|ref|XP_002626176.1| WD repeat-containing protein [Ajellomyces dermatitidis SLH14081]
 gi|239594384|gb|EEQ76965.1| WD repeat-containing protein [Ajellomyces dermatitidis SLH14081]
 gi|239615549|gb|EEQ92536.1| WD repeat-containing protein [Ajellomyces dermatitidis ER-3]
          Length = 497

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 73/211 (34%), Gaps = 20/211 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +Y+       +   +FSP+   +A  + D      + + DT   R         + I
Sbjct: 147 YREKYVLKGHQLGVSSVKFSPDGSMIASCSAD----ATIKIWDTASGRLIHTFEGHLAGI 202

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIV 317
               +S +G     S   D+++ ++ V   +        L +  +I   A +SP  + +V
Sbjct: 203 STISWSPDGALIA-SGSDDKSIRLWHVP--TGKPHPNPFLGHHNYIYCIA-FSPKGNMLV 258

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S     E +Y+     +   R                 G LI      G    I +  
Sbjct: 259 SGSY---DEAVYLWDVRSARVMRSLPAHSDPVAGVDVVRDGTLIVSCASDG---LIRIWD 312

Query: 378 KDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
               Q  R LV + N  + A  +SP+G+ ++
Sbjct: 313 TATGQCLRTLVHEDNPPVSAVKFSPNGKYVL 343



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 58/178 (32%), Gaps = 10/178 (5%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR-AP 250
           ++ + D     + +        +    +SP+   +A  + D      + L      +  P
Sbjct: 180 TIKIWDTASGRLIHTFEGHLAGISTISWSPDGALIASGSDDK----SIRLWHVPTGKPHP 235

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                  + I    FS  G   + S   DEA+ ++ V   +     L             
Sbjct: 236 NPFLGHHNYIYCIAFSPKGNMLV-SGSYDEAVYLWDV-RSARVMRSLPAHSDPVAGVDVV 293

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-AFTKFS 367
            D + IV  +  +G  +++   + G   + +  +         +SP G  + A+T   
Sbjct: 294 RDGTLIVSCAS-DGLIRIWDT-ATGQCLRTLVHEDNPPVSAVKFSPNGKYVLAWTHDD 349


>gi|115377835|ref|ZP_01465023.1| hypothetical protein STIAU_4343 [Stigmatella aurantiaca DW4/3-1]
 gi|115365167|gb|EAU64214.1| hypothetical protein STIAU_4343 [Stigmatella aurantiaca DW4/3-1]
          Length = 1133

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 56/285 (19%), Positives = 99/285 (34%), Gaps = 55/285 (19%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRI---GNFRSMIL 261
           L   R  I+     SP+ + +AY T   E    R+YL+D +   + +++   G   +  L
Sbjct: 466 LLEERSGIITALNSSPDGKLIAYRTIIPETGESRLYLVDPKAPNSAEKVVSDGQPGAESL 525

Query: 262 AP----RFSSNGKRALISVQKDEAMDIYS------------------------------- 286
            P     FS          + +    IY                                
Sbjct: 526 HPIFGRNFSLAKDSLAYVAEVNGRDVIYVQRYTYVSQQKTIDALVRRSAIRTGIERETNV 585

Query: 287 ---VDLQSNATERLTNTLFINISA-SYSPDSSQIVFES-DREGKEQLYVMQSNGS-DQKR 340
              +DL      R+     + +S+ ++SPD   + F   +  G   +YV+   G  D K 
Sbjct: 586 SVDIDLGDKTAYRVGQHGLLGVSSVAFSPDGQSLAFIGINEAGFRDVYVLSLAGGKDAKP 645

Query: 341 I-SQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKD--GSQERLLVEDSNLQAP 395
           +   D + +     W P G  I +T    S   F +  ++    G+ ERL  E+ +   P
Sbjct: 646 VKLTDDQYTERQITWGPSG--IIYTSDATSHRHFNLFRVQSSAPGAIERLTTEERDEADP 703

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
              P GR + F   ++  + S L+ +   G      +      +P
Sbjct: 704 VALPDGR-IFFVAYRN--SSSDLHELMPGGSIVRRTDLTTGVFEP 745



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 10/158 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRA--PKRIGNFRSMILAPRFSSNGKRALIS 275
            FSP+ Q +A+   ++     VY++     +   P ++ + +       +  +G   + +
Sbjct: 611 AFSPDGQSLAFIGINEAGFRDVYVLSLAGGKDAKPVKLTDDQYTERQITWGPSG--IIYT 668

Query: 276 VQKDEAMDIYSVDLQS---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                        +QS    A ERLT            PD  +I F + R     L+ + 
Sbjct: 669 SDATSHRHFNLFRVQSSAPGAIERLTTEERDEADPVALPDG-RIFFVAYRNSSSDLHELM 727

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             GS  +R   D     F+P   P+G L      SGE+
Sbjct: 728 PGGSIVRR--TDLTTGVFEPGPGPEGSLWMLFHQSGER 763


>gi|125983742|ref|XP_001355636.1| GA14510 [Drosophila pseudoobscura pseudoobscura]
 gi|195163421|ref|XP_002022548.1| GL13093 [Drosophila persimilis]
 gi|54643952|gb|EAL32695.1| GA14510 [Drosophila pseudoobscura pseudoobscura]
 gi|194104540|gb|EDW26583.1| GL13093 [Drosophila persimilis]
          Length = 356

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 83/224 (37%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 57  YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 112

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + I+ +     + + L          +++P S+ IV  S
Sbjct: 113 SDVAWSSD-SRLLVSGSDDKTLKIWELS-TGKSLKTLKGHSNYVFCCNFNPQSNLIVSGS 170

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 171 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 225

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 226 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 266


>gi|119489507|ref|ZP_01622268.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
 gi|119454586|gb|EAW35733.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
          Length = 743

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 77/219 (35%), Gaps = 14/219 (6%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y  +    G   S         + G     + V D       +        +     SP+
Sbjct: 532 YSYVNHITGIAISSDESKLVYAILGYKSFVIKVFDLPSKKELFTLSGHRSFVRAVTISPD 591

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             K+   ++D      V + D    +    +    S + A   SSNG + ++S   D+ +
Sbjct: 592 SSKLVSGSWDK----TVKVWDLATGKELLTLNGHSSSVKAVAISSNGSK-VVSASSDKTV 646

Query: 283 DIYSVDLQSNATERLT-NTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            ++  DL +   E LT N    ++ A + S D S++V  S     + + V   N   +  
Sbjct: 647 KVW--DLATG-EELLTLNGHSSSVEAVAISSDGSKVVSASS---DKTVKVWDLNTGKEI- 699

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           I+   ++++     SP    I     SG    + +   D
Sbjct: 700 ITFIGDSNFNCCAISPDNQTIVAGDVSGMLHFLRIEGLD 738


>gi|119489374|ref|ZP_01622154.1| hypothetical protein L8106_02422 [Lyngbya sp. PCC 8106]
 gi|119454647|gb|EAW35793.1| hypothetical protein L8106_02422 [Lyngbya sp. PCC 8106]
          Length = 3375

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 51/264 (19%), Positives = 87/264 (32%), Gaps = 74/264 (28%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------KDEAMDIYSVD 288
           + V   + +    P+ +G+    I     S+NG+                ++  DI+  D
Sbjct: 199 VSVNSQEEQAAADPQNLGSQDGNI-----SNNGQLIAFESNANNLVPDDNNDVSDIFVRD 253

Query: 289 LQSNATERLTNTL----FINISASYS--------PDSSQIVFESDRE----GKEQ----- 327
            Q+  T R++         + S ++S        PD   + FES       G        
Sbjct: 254 RQTGITTRVSINSFGQEGNDKSGAFSDSILPAITPDGRFVAFESKASNLAPGDNNAEEWD 313

Query: 328 LYVMQSNGSDQKRISQDKEA-----SYFDPVWSPQGDLIAFTKF---------SGEKFAI 373
           ++V         R+S D        +  +PV +P G  IAF            + E + I
Sbjct: 314 IFVRDLQTETTTRVSIDNNGISGDDASRNPVITPDGRFIAFESRAENLVPRDNNSETWDI 373

Query: 374 GVMKKD---------GSQERL--------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            V  +D         GS   +        L  + +   P+ S  GR ++F    +     
Sbjct: 374 FVHDRDFDRNGSFEEGSSRTVRISINGMGLQGNDDSFDPSISNDGRFVLFESDAN----- 428

Query: 417 KLYSIDLNGRNETLINTPAYASDP 440
            L   D NG  +  I    +  DP
Sbjct: 429 NLVVGDNNGVRDIFI----HDRDP 448



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 62/368 (16%), Positives = 110/368 (29%), Gaps = 98/368 (26%)

Query: 158 ISDDIYQSITGEK--GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL- 214
            SD I  +IT +     F S+   ++    +   +  + V D        ++   + I  
Sbjct: 278 FSDSILPAITPDGRFVAFESKASNLAP-GDNNAEEWDIFVRDLQTETTTRVSIDNNGISG 336

Query: 215 ----FEPRFSPNQQKVAYAT------------------YDDEDILRVYLMDTRIDRAPKR 252
                 P  +P+ + +A+ +                    D D  R    +    R  + 
Sbjct: 337 DDASRNPVITPDGRFIAFESRAENLVPRDNNSETWDIFVHDRDFDRNGSFEEGSSRTVRI 396

Query: 253 IGNFRSMI-----LAPRFSSNGKRALI--------SVQKDEAMDIYSVDLQ--------- 290
             N   +        P  S++G+  L             +   DI+  D           
Sbjct: 397 SINGMGLQGNDDSFDPSISNDGRFVLFESDANNLVVGDNNGVRDIFIHDRDPDGNGIFDQ 456

Query: 291 -SNATERLTNTLF----INIS--ASYSPDSSQIVFES--------DREGKEQLYVMQSNG 335
            ++   RL   L      N S    +S ++  IVFES        D      ++V     
Sbjct: 457 GNSIISRLPIGLGGVEANNASFDPQFSGNNRFIVFESLANNLVEGDSNNALDIFVYDLQT 516

Query: 336 SDQKRISQD-----KEASYFDPVWSPQGDLIAFTKFS--------GEKFAIGVMKKD--- 379
               R+S D        +   P  S  G  + F+  S             I V  +D   
Sbjct: 517 GVTNRVSVDANGVGGNQNSSQPSISNDGRFVGFSSRSSNFVLGDNNGVEDIFVHDRDPDQ 576

Query: 380 --------GSQERLLVEDSNLQ--APTW----SPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                   G   R+ + D+  +  A ++    S  G  + F         + L  +D NG
Sbjct: 577 DGVFDQGNGIITRVSISDTGEEGNANSFQSVVSGDGSLVSFES-----LANNLIPVDTNG 631

Query: 426 RNETLINT 433
             +  I+T
Sbjct: 632 VADVFIST 639


>gi|218890156|ref|YP_002439020.1| putative TolB-like translocation protein [Pseudomonas aeruginosa
           LESB58]
 gi|218770379|emb|CAW26144.1| putative TolB-like translocation protein [Pseudomonas aeruginosa
           LESB58]
          Length = 335

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 67/182 (36%), Gaps = 18/182 (9%)

Query: 269 GKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESD 321
           G R +        D + ++Y  D +S +T +L N    NI     A +SPD   + F   
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQL-NQPGWNIEDPMNAHFSPDGRYLTFMGR 103

Query: 322 REGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           + G   ++     G+     ++        DP +S  G  +        + A  V   DG
Sbjct: 104 QNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQVVLKHEGDIRLATLVFNGDG 163

Query: 381 SQE----RLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           S      + +  D        P  +PSG+ ++++         ++   +L     + + T
Sbjct: 164 SVGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYAT--GAGDSLRVVRRNLENGQVSPLAT 221

Query: 434 PA 435
           PA
Sbjct: 222 PA 223



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 14/188 (7%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQK 278
             ++ Y +Y +       L          R  N     +       FS +G+      ++
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIEDPMNAHFSPDGRYLTFMGRQ 104

Query: 279 DEAMDIYSVDLQSNA-TERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNG- 335
           + A  +++  +        LT      N    +S D  Q+V + + + +    V   +G 
Sbjct: 105 NGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQVVLKHEGDIRLATLVFNGDGS 164

Query: 336 ---SDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--- 388
              S  K ++ D  ++    P  +P G  + +   +G+   +     +  Q   L     
Sbjct: 165 VGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYATGAGDSLRVVRRNLENGQVSPLATPAA 224

Query: 389 DSNLQAPT 396
                 P 
Sbjct: 225 GGRDYYPV 232



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 75/278 (26%), Gaps = 15/278 (5%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH                     L     +  G   ++L + D    + R L      I 
Sbjct: 25  AHAACTANLALQPASSLPALGGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIE 84

Query: 215 --FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKR 271
                 FSP+ + + +          V+       +AP  +          P+FS +G++
Sbjct: 85  DPMNAHFSPDGRYLTFMG-RQNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQ 143

Query: 272 ALISVQKDEAMDIYSVDLQSN---ATERLTNTLFINIS---ASYSPDSSQIVFESDREGK 325
            ++  + D  +     +   +   +  +       +        +P    +V+ +     
Sbjct: 144 VVLKHEGDIRLATLVFNGDGSVGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYATGAGDS 203

Query: 326 EQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---KKDGS 381
            ++            + +       + PV                   + ++      G+
Sbjct: 204 LRVVRRNLENGQVSPLATPAAGGRDYYPVVRDYTAYFLSRTQPAGNDQLAMVVPNSPPGT 263

Query: 382 QERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKL 418
              L +          +P +   LIFS      T S L
Sbjct: 264 PAILPLNHCQGDNSDAAPVNEDYLIFSSTSFDPTYSLL 301


>gi|171693041|ref|XP_001911445.1| hypothetical protein [Podospora anserina S mat+]
 gi|154936834|emb|CAL30202.1| HNWD2 [Podospora anserina]
 gi|170946469|emb|CAP73270.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1017

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 41/269 (15%), Positives = 83/269 (30%), Gaps = 34/269 (12%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGII-KNSLCVMDRDGANIRYLTPSRDQILFEP----- 217
           ++++  +      I       + G   +  L    RD    R+   +R  I   P     
Sbjct: 718 EALSLLRAISEGVIAIRKLEGLLGRTHQRQLTTFIRDAH--RFALSNRWIIEQAPLQAYT 775

Query: 218 ---RFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
               F+P    V   + T +   I    +++T  +   + +      + +  FS++G+R 
Sbjct: 776 SALVFAPVGSLVKKRFKTEEPSWISTKPVVETDWNACLQTLEGHNGSVYSVAFSADGQRL 835

Query: 273 LISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK--EQLY 329
             S   D  + I+  D  S    + L        S ++SPD  ++       G   + + 
Sbjct: 836 A-SGAGDRTVKIW--DPASGQCFQTLEGHNGSVYSVAFSPDGQRLA-----SGAVDDTVK 887

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +         +  +    S +   +S  G  +A          + +      Q    +E 
Sbjct: 888 IWDPASGQCLQTLEGHNGSVYSVAFSADGQRLASGAVDCT---VKIWDPASGQCLQTLEG 944

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                        S+ F     G  G  L
Sbjct: 945 YRSSV-------SSVAFLADNQGAHGYGL 966



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 73/198 (36%), Gaps = 23/198 (11%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + + SG    ++ + D             +  ++   FSP+ Q++A    DD     V +
Sbjct: 833  QRLASGAGDRTVKIWDPASGQCFQTLEGHNGSVYSVAFSPDGQRLASGAVDD----TVKI 888

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D    +  + +      + +  FS++G+R   S   D  + I+  D  S    +     
Sbjct: 889  WDPASGQCLQTLEGHNGSVYSVAFSADGQRLA-SGAVDCTVKIW--DPASGQCLQTLEGY 945

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP----- 356
              ++S         + F +D +G    Y +  + +    I   +   +  P + P     
Sbjct: 946  RSSVS--------SVAFLADNQGA-HGYGLGQDTTWV--ICNGQNVLWLPPEYRPTCSAI 994

Query: 357  QGDLIAFTKFSGEKFAIG 374
            QG ++A    SG  F IG
Sbjct: 995  QGRIVAIGCSSGRVFTIG 1012


>gi|126172817|ref|YP_001048966.1| peptidase S9 prolyl oligopeptidase [Shewanella baltica OS155]
 gi|125996022|gb|ABN60097.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella baltica OS155]
          Length = 823

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 77/226 (34%), Gaps = 13/226 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++  +A    ++          T+  R  + + ++     A ++  +  +  + ++  + 
Sbjct: 337 DEDVLAKVKAENAKAKGETYQSTKAPRKIQLMQDWGWTQSAIQWHESEDKLALMLEATDN 396

Query: 282 MDIYSVDLQSNATERLTNTLFINISAS--------YSPDSSQIVFESDREGKEQLYVMQS 333
            D +   +     +  T     + +          + P +  + + S+  G  QLYV   
Sbjct: 397 KDRWIASVDLTKGKFTTEHRLHDDAWVNYDYNQFGWLPGTDSLYYLSEESGYSQLYVKGL 456

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSN 391
            G   + ++Q K     D   SP  + I +         + +  +     +   L +   
Sbjct: 457 -GEKPRALTQGKFV-VSDIQLSPDANYIYYKANQTHPGIYNVHRVNLATGKNEQLTQWDG 514

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               + SP G  L+ +  +      +LY   + G  + L +  + A
Sbjct: 515 NLDYSLSPDGTQLLLNASRRTQPN-ELYVQSIGGELKQLTSYTSDA 559



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 55/138 (39%), Gaps = 6/138 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P    + Y + +        L    +   P+ +   + ++   + S +         +
Sbjct: 432 WLPGTDSLYYLSEESG---YSQLYVKGLGEKPRALTQGKFVVSDIQLSPDANYIYYKANQ 488

Query: 279 D--EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                 +++ V+L +   E+LT     N+  S SPD +Q++  + R  +     +QS G 
Sbjct: 489 THPGIYNVHRVNLATGKNEQLTQWDG-NLDYSLSPDGTQLLLNASRRTQPNELYVQSIGG 547

Query: 337 DQKRISQDKEASYFDPVW 354
           + K+++     ++ +  W
Sbjct: 548 ELKQLTSYTSDAFKNYPW 565



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 41/104 (39%), Gaps = 4/104 (3%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           G   R LT  +  ++ + + SP+   + Y A      I  V+ ++    +  +++  +  
Sbjct: 457 GEKPRALTQGK-FVVSDIQLSPDANYIYYKANQTHPGIYNVHRVNLATGKN-EQLTQWDG 514

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             L    S +G + L++  +    +   V       ++LT+   
Sbjct: 515 -NLDYSLSPDGTQLLLNASRRTQPNELYVQSIGGELKQLTSYTS 557


>gi|325916308|ref|ZP_08178586.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325537479|gb|EGD09197.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 770

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 79/277 (28%), Gaps = 61/277 (22%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR------------------------- 252
            +SP+ +K+A    D      +YL+ T++     +                         
Sbjct: 209 AWSPDSRKIATFQQDQRKTGEMYLVSTKLGHPELQSWKYPMAGDKDVTMIERVVIDVPSA 268

Query: 253 -------------------IGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQS 291
                              +     +    +++ + K    +        ++    D  +
Sbjct: 269 SVVRLKMPADQHRSTLCDDVSCSPGLWDDVKWAPDSKTLAFASTSRFHKQVWLRIADADT 328

Query: 292 NATERL------TNTLFINISASYS--PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            A          T      ++A+++  P S++ V+ S+R    QLY+        KR   
Sbjct: 329 GAVRTAFDETAKTYYESGQVAANWAYLPGSNEAVWFSERSDWGQLYLYDLATGKPKRAIT 388

Query: 344 DKEASYFD-PVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             E +  +     P      F               +  +  DG +  LL  +    +  
Sbjct: 389 TGEGNVTELLRVDPVTRTAWFVGVGKVAGVDPYYQQLWKVSLDGGEPVLLTPEVADHSIA 448

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            SP G+  + +          +     +GR  + I T
Sbjct: 449 LSPDGKRFVDTYSTSVTAPVSVLRDAADGRTVSTIAT 485



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/182 (13%), Positives = 55/182 (30%), Gaps = 31/182 (17%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL---------------FINISASY 309
            S + +            +++  +L +    +LT                    N   ++
Sbjct: 155 LSPDKRSEAFI----RNWNLWVRELATGKETQLTRDGVENFGYATDNAGWQHSDNAIVAW 210

Query: 310 SPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPDS +I  F+ D+    ++Y++ +     +  S     +    V      +I       
Sbjct: 211 SPDSRKIATFQQDQRKTGEMYLVSTKLGHPELQSWKYPMAGDKDV-----TMIERVVIDV 265

Query: 369 EKFAIGVMKKDGSQERLLV------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              ++  +K    Q R  +               W+P  ++L F+          L   D
Sbjct: 266 PSASVVRLKMPADQHRSTLCDDVSCSPGLWDDVKWAPDSKTLAFASTSRFHKQVWLRIAD 325

Query: 423 LN 424
            +
Sbjct: 326 AD 327


>gi|117919060|ref|YP_868252.1| peptidase S9 prolyl oligopeptidase [Shewanella sp. ANA-3]
 gi|117611392|gb|ABK46846.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sp. ANA-3]
          Length = 826

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 81/226 (35%), Gaps = 13/226 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++  +A    ++          T+  R  + + ++     A ++  +  +  + V+  + 
Sbjct: 337 DEDVLAKVKTENAKAKGESYQSTKAPRKIQLMQDWGWTQSAIQWHESEDKLAVMVEATDN 396

Query: 282 MDIYSVDLQSNATERLTNTLFINISAS--------YSPDSSQIVFESDREGKEQLYVMQS 333
            D +   +     + +T     + +          + P +  + + S+  G  QLY+ ++
Sbjct: 397 KDRWIASVDLAKGKFITEHRLHDDAWVNYDYNQFGWLPGTDALYYLSEETGYSQLYI-KA 455

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSN 391
            G   + ++Q K     D   SP  + I +         + +  +     +   L +   
Sbjct: 456 RGEKPRALTQGKFV-VSDITLSPDANYIYYKANQSHPGIYNVHRVNIASGKNEQLTQWDG 514

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               + SP G  L+ +  +  +   +LY   + G  + L +  + A
Sbjct: 515 NLDYSLSPDGTKLLLNASRRTEPN-ELYVQPIGGELKQLTSYTSDA 559



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 61/173 (35%), Gaps = 13/173 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSR-------DQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
               +   D A  +++T  R       +    +  + P    + Y + +        L  
Sbjct: 397 KDRWIASVDLAKGKFITEHRLHDDAWVNYDYNQFGWLPGTDALYYLSEETG---YSQLYI 453

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
                 P+ +   + ++     S +         +      +++ V++ S   E+LT   
Sbjct: 454 KARGEKPRALTQGKFVVSDITLSPDANYIYYKANQSHPGIYNVHRVNIASGKNEQLTQWD 513

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             N+  S SPD ++++  + R  +     +Q  G + K+++     ++    W
Sbjct: 514 G-NLDYSLSPDGTKLLLNASRRTEPNELYVQPIGGELKQLTSYTSDAFKQYPW 565


>gi|315223769|ref|ZP_07865619.1| peptidase [Capnocytophaga ochracea F0287]
 gi|314946344|gb|EFS98343.1| peptidase [Capnocytophaga ochracea F0287]
          Length = 633

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 84/226 (37%), Gaps = 23/226 (10%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--- 278
           N+    +   +D +  ++ +M+      P+         +   +S +GK+ L   +    
Sbjct: 136 NEGSYNHVMIEDSNGKQIDIMEGLPYYCPQLPFGGDEDYI---WSLDGKKVLYVTKAKVG 192

Query: 279 -----DEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGK----EQL 328
                    DIY  DL S  T  LT  +   + +  YS +          +G       L
Sbjct: 193 TDYVLSTNTDIYEYDLTSKKTTNLTEGMMGYDTNPQYSKEGVLAWLSMAHDGNEADKNDL 252

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTKFSGEKFAIGVMKKDGSQERL 385
           Y+++        ++ + + + F   WS  G    LIA  + + + F +    KD S  R 
Sbjct: 253 YILK--DGKCINLTANWDNTVFSYRWSNDGKQIYLIAAIQGTEQVFVVAPFSKDTS-PRQ 309

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           L +           +G  L+  R  D +  ++LY+I+L  +   + 
Sbjct: 310 LTQGVFDVNSIVGQAGDQLVVMRT-DMNHAAELYTINLKEKKGRIT 354



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 61/185 (32%), Gaps = 17/185 (9%)

Query: 219 FSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +S + +KV Y T       Y       +Y  D    +              P++S  G  
Sbjct: 176 WSLDGKKVLYVTKAKVGTDYVLSTNTDIYEYDLTSKKTTNLTEGMMGYDTNPQYSKEGVL 235

Query: 272 ALISVQKDEA----MDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKE 326
           A +S+  D       D+Y   L+      LT      + S  +S D  QI   +  +G E
Sbjct: 236 AWLSMAHDGNEADKNDLYI--LKDGKCINLTANWDNTVFSYRWSNDGKQIYLIAAIQGTE 293

Query: 327 QLYVMQS--NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           Q++V+      +  ++++Q         V      L+           +  +     + R
Sbjct: 294 QVFVVAPFSKDTSPRQLTQGVF-DVNSIVGQAGDQLVVMRTDMNHAAELYTINLKEKKGR 352

Query: 385 LLVED 389
           + +  
Sbjct: 353 ITLSQ 357



 Score = 43.1 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 80/214 (37%), Gaps = 16/214 (7%)

Query: 176 RILFVSESVVSG----IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT- 230
           ++L+V+++ V           +   D        LT         P++S     +A+ + 
Sbjct: 182 KVLYVTKAKVGTDYVLSTNTDIYEYDLTSKKTTNLTEGMMGYDTNPQYSKEG-VLAWLSM 240

Query: 231 -YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            +D  +  +  L   +  +      N+ + + + R+S++GK+  +         ++ V  
Sbjct: 241 AHDGNEADKNDLYILKDGKCINLTANWDNTVFSYRWSNDGKQIYLIAAIQGTEQVFVVAP 300

Query: 290 QSN--ATERLTNTLFINISASYSPDSSQ-IVFESDREGKEQLYVMQSNGSDQK----RIS 342
            S   +  +LT  +F ++++       Q +V  +D     +LY +       +    ++S
Sbjct: 301 FSKDTSPRQLTQGVF-DVNSIVGQAGDQLVVMRTDMNHAAELYTINLKEKKGRITLSQLS 359

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              +  Y      P  + I  T   G++    V+
Sbjct: 360 HFNDELYKGIAECPIKECIIKTT-DGKRMHAWVI 392


>gi|242816686|ref|XP_002486795.1| WD-repeat protein, putative [Talaromyces stipitatus ATCC 10500]
 gi|218713260|gb|EED12684.1| WD-repeat protein, putative [Talaromyces stipitatus ATCC 10500]
          Length = 933

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 76/208 (36%), Gaps = 17/208 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++V SG   N++ + D    +           +    FS + Q VA  +YD+     + L
Sbjct: 638 QTVASGSSDNTIKLWDTMTGSELQTLKGHLNWVNSVAFSHDGQMVASGSYDN----TIKL 693

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D +     +        + +  FS +  + ++S  +D  + ++  ++++ +  + T   
Sbjct: 694 WDAKTSSELQTFKGHSDWVNSVAFSHD-SQIIVSGSRDNTIKLW--NVKTGSELQ-TFKG 749

Query: 302 FINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             +   S ++S D   +   S       + +  +    + +  +    S     +S  G 
Sbjct: 750 HPDSVNSVAFSHDGQMMASGSR---DSTIKLWDAKTGSESQTLKGHSDSVNSVAFSNDGQ 806

Query: 360 LIAFTKFSGEKFAIGVMKK-DGSQERLL 386
            +A   +      I +     GS  ++L
Sbjct: 807 TVASGSYDNT---IKLWDTKTGSGLQML 831



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/345 (14%), Positives = 115/345 (33%), Gaps = 47/345 (13%)

Query: 108 AQVLVTGRVIKEGK-DRLRVEFR--LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           ++ +    +++ G    +  EF   L+D   R+ I+   + +S +  +     +   I  
Sbjct: 498 SEAVAMIDILQSGARGDVDAEFSDFLYD--ARRFILKNTYMASLSPLQLYCSGVV-FIPM 554

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
             T  K   +SR              + L  ++ D + +          +    FS + Q
Sbjct: 555 RSTIRKIFLDSR----------PKQIHMLPQVEDDWSPVLQTLEGHSDSVNSVAFSNSGQ 604

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            VA  + D      + L DT               + +  FS +G+    S   D  + +
Sbjct: 605 TVASGSNDR----TIKLWDTFKG--------HSKWVNSVAFSHDGQTVA-SGSSDNTIKL 651

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +   +  +  + L   L    S ++S D   +   S       + +  +  S + +  + 
Sbjct: 652 WDT-MTGSELQTLKGHLNWVNSVAFSHDGQMVASGSY---DNTIKLWDAKTSSELQTFKG 707

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGR 402
                    +S    +I           I +       E    +    ++ +  +S  G+
Sbjct: 708 HSDWVNSVAFSHDSQIIVSGSRDNT---IKLWNVKTGSELQTFKGHPDSVNSVAFSHDGQ 764

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDPQ 441
            +    +   D+  KL+       ++TL      +N+ A+++D Q
Sbjct: 765 MMASGSR---DSTIKLWDAKTGSESQTLKGHSDSVNSVAFSNDGQ 806



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 59/161 (36%), Gaps = 14/161 (8%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES--VVSGIIKNS 192
           D + +    + ++   W       S ++         D+ + + F  +S  +VSG   N+
Sbjct: 678 DGQMVASGSYDNTIKLWDA---KTSSEL--QTFKGHSDWVNSVAFSHDSQIIVSGSRDNT 732

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + +    +           +    FS + Q +A  + D      + L D +     + 
Sbjct: 733 IKLWNVKTGSELQTFKGHPDSVNSVAFSHDGQMMASGSRDS----TIKLWDAKTGSESQT 788

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +      + +  FS++G+    S   D  + ++  D ++ +
Sbjct: 789 LKGHSDSVNSVAFSNDGQTVA-SGSYDNTIKLW--DTKTGS 826


>gi|302541620|ref|ZP_07293962.1| S9C (acylaminoacyl-peptidase) family peptidase [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302459238|gb|EFL22331.1| S9C (acylaminoacyl-peptidase) family peptidase [Streptomyces
           himastatinicus ATCC 53653]
          Length = 667

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 103/299 (34%), Gaps = 59/299 (19%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN------IRYLTPSRDQILFEPR 218
            +  ++G+    +   +    + + +  +  +  DG+       +R LT +R   +  PR
Sbjct: 136 RLHADRGEVWCVLEEFTGERPTDVRR-VIAAVPLDGSAAEDRTAVRELTDARHDFVTAPR 194

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+ ++VA+  ++  ++                               +G   +++   
Sbjct: 195 LSPDGRRVAWIAWNHPEMPW-----------------------------DGTVVMVAEVA 225

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--GS 336
           D+   I  + L     E +         A ++PD S ++F SD  G  QL  +  +  G 
Sbjct: 226 DDGPFITVLPLVGETDESV-------AQAEWAPDGS-LLFVSDLSGWWQLERIDPDRAGG 277

Query: 337 D--------QKRISQDKEASYFDPVW-SP-QGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           D         ++             W +P  G LIA     G +  +G++  +  +   +
Sbjct: 278 DVIASSTLCPRQEEFGGPLWKLGHRWFAPLDGGLIAVLHGRGAQ-TLGILDPETGELADV 336

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQWVG 444
                   PT +  G  ++        +G ++  +D    +  +I +      DP +  
Sbjct: 337 AGPWTEWEPTLAVDGTRVVGVAASP-HSGHEVVELDTLTGHARVIGSAHTDPVDPAYYP 394


>gi|301164183|emb|CBW23741.1| conserved exported protein [Bacteroides fragilis 638R]
          Length = 845

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 84/262 (32%), Gaps = 52/262 (19%)

Query: 218 RFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             SP+ + +   Y         R Y   T +      + N R  +   R+     +   +
Sbjct: 212 SVSPDGKYLLTRYWDNHSLKRSRTYCELTELKTGKVLLTNLRDGM---RWMPKSNKLYYT 268

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS------------------SQIV 317
           V   E  D+ ++D  +   E L   +      S+SP+                    +IV
Sbjct: 269 VVAPEGNDVITLDPVTLKEEVLLRGI-PEQGFSWSPNEDFLIYYPREEGVKDEGPLKRIV 327

Query: 318 FESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------F 366
             +DR     G+  L          +R++     S +    SP G  + ++         
Sbjct: 328 SPADRIPDTRGRSFLARYDIASGTSERLTY-GNHSTYMQDISPDGKYLLYSSSKENITQR 386

Query: 367 SGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-------------- 411
                ++  +  +  + + L  ED  L   ++SP G+ L+ +   +              
Sbjct: 387 PFSLSSLFQVNLETLAVDTLFFEDRFLGGASYSPDGKQLLLTASPEAFDGIGKNCGNHPI 446

Query: 412 -GDTGSKLYSIDLNGRNETLIN 432
             D  S+ + +DL  R    I 
Sbjct: 447 ANDFDSQAFIMDLATRKIDPIT 468



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 83/262 (31%), Gaps = 45/262 (17%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRI---------------DRAPKRIGNFR 257
            +SPN+  + Y        D+  + R+     RI                   +R+    
Sbjct: 300 SWSPNEDFLIYYPREEGVKDEGPLKRIVSPADRIPDTRGRSFLARYDIASGTSERLTYGN 359

Query: 258 SMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYS 310
                   S +GK  L S  K+           ++ V+L++ A + L         ASYS
Sbjct: 360 HSTYMQDISPDGKYLLYSSSKENITQRPFSLSSLFQVNLETLAVDTLFFEDRFLGGASYS 419

Query: 311 PDSSQIVFESDRE-----GKE------------QLYVMQSNGSDQKRISQDKEASYFDPV 353
           PD  Q++  +  E     GK             Q ++M         I+++   S     
Sbjct: 420 PDGKQLLLTASPEAFDGIGKNCGNHPIANDFDSQAFIMDLATRKIDPITKEFNPSVNFLQ 479

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           W+     I F+    +   I      D   E+L +E     A   S +  SL     +  
Sbjct: 480 WNKGDGCIYFSTNDEDCRNIYRYSPKDRKFEKLNLETDVTSAFAMSENNPSLAAYIGQGC 539

Query: 413 DTGSKLYSIDLNGRNETLINTP 434
                 Y  DL  +   LI  P
Sbjct: 540 YNAGVAYVYDLKKKTSRLIADP 561


>gi|253565205|ref|ZP_04842661.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251946670|gb|EES87047.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 845

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 84/262 (32%), Gaps = 52/262 (19%)

Query: 218 RFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             SP+ + +   Y         R Y   T +      + N R  +   R+     +   +
Sbjct: 212 SVSPDGKYLLTRYWDNHSLKRSRTYCELTELKTGKVLLTNLRDGM---RWMPKSNKLYYT 268

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS------------------SQIV 317
           V   E  D+ ++D  +   E L   +      S+SP+                    +IV
Sbjct: 269 VVAPEGNDVITLDPVTLKEEVLLRGI-PEQGFSWSPNEDFLIYYPREEGVKDEGPLKRIV 327

Query: 318 FESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------F 366
             +DR     G+  L          +R++     S +    SP G  + ++         
Sbjct: 328 SPADRIPNTRGRSFLARYDIASGTSERLTY-GNHSTYMQDISPDGKYLLYSSSKENITQR 386

Query: 367 SGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-------------- 411
                ++  +  +  + + L  ED  L   ++SP G+ L+ +   +              
Sbjct: 387 PFSLSSLFQVNLETLAVDTLFFEDRFLGGASYSPDGKQLLLTASPEAFDGIGKNCGNHPI 446

Query: 412 -GDTGSKLYSIDLNGRNETLIN 432
             D  S+ + +DL  R    I 
Sbjct: 447 ANDFDSQAFIMDLATRKIDPIT 468



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 83/262 (31%), Gaps = 45/262 (17%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRI---------------DRAPKRIGNFR 257
            +SPN+  + Y        D+  + R+     RI                   +R+    
Sbjct: 300 SWSPNEDFLIYYPREEGVKDEGPLKRIVSPADRIPNTRGRSFLARYDIASGTSERLTYGN 359

Query: 258 SMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYS 310
                   S +GK  L S  K+           ++ V+L++ A + L         ASYS
Sbjct: 360 HSTYMQDISPDGKYLLYSSSKENITQRPFSLSSLFQVNLETLAVDTLFFEDRFLGGASYS 419

Query: 311 PDSSQIVFESDRE-----GKE------------QLYVMQSNGSDQKRISQDKEASYFDPV 353
           PD  Q++  +  E     GK             Q ++M         I+++   S     
Sbjct: 420 PDGKQLLLTASPEAFDGIGKNCGNHPIANDFDSQAFIMDLATRKIDPITKEFNPSVNFLQ 479

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           W+     I F+    +   I      D   E+L +E     A   S +  SL     +  
Sbjct: 480 WNKGDGCIYFSTNDEDCRNIYRYSPKDRKFEKLNLETDVTSAFAMSENNPSLAAYIGQGC 539

Query: 413 DTGSKLYSIDLNGRNETLINTP 434
                 Y  DL  +   LI  P
Sbjct: 540 YNAGVAYVYDLKKKTSRLIADP 561


>gi|60682706|ref|YP_212850.1| hypothetical protein BF3237 [Bacteroides fragilis NCTC 9343]
 gi|60494140|emb|CAH08932.1| conserved exported protein [Bacteroides fragilis NCTC 9343]
          Length = 845

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 84/262 (32%), Gaps = 52/262 (19%)

Query: 218 RFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             SP+ + +   Y         R Y   T +      + N R  +   R+     +   +
Sbjct: 212 SVSPDGKYLLTRYWDNHSLKRSRTYCELTELKTGKVLLTNLRDGM---RWMPKSNKLYYT 268

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS------------------SQIV 317
           V   E  D+ ++D  +   E L   +      S+SP+                    +IV
Sbjct: 269 VVAPEGNDVITLDPVTLKEEVLLRGI-PEQGFSWSPNEDFLIYYPREEGVKDEGPLKRIV 327

Query: 318 FESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------F 366
             +DR     G+  L          +R++     S +    SP G  + ++         
Sbjct: 328 SPADRIPNTRGRSFLARYDIASGTSERLTY-GNHSTYMQDISPDGKYLLYSSSKENITQR 386

Query: 367 SGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-------------- 411
                ++  +  +  + + L  ED  L   ++SP G+ L+ +   +              
Sbjct: 387 PFSLSSLFQVNLETLAVDTLFFEDRFLGGASYSPDGKQLLLTASPEAFDGIGKNCGNHPI 446

Query: 412 -GDTGSKLYSIDLNGRNETLIN 432
             D  S+ + +DL  R    I 
Sbjct: 447 ANDFDSQAFIMDLATRKIDPIT 468



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 83/262 (31%), Gaps = 45/262 (17%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRI---------------DRAPKRIGNFR 257
            +SPN+  + Y        D+  + R+     RI                   +R+    
Sbjct: 300 SWSPNEDFLIYYPREEGVKDEGPLKRIVSPADRIPNTRGRSFLARYDIASGTSERLTYGN 359

Query: 258 SMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYS 310
                   S +GK  L S  K+           ++ V+L++ A + L         ASYS
Sbjct: 360 HSTYMQDISPDGKYLLYSSSKENITQRPFSLSSLFQVNLETLAVDTLFFEDRFLGGASYS 419

Query: 311 PDSSQIVFESDRE-----GKE------------QLYVMQSNGSDQKRISQDKEASYFDPV 353
           PD  Q++  +  E     GK             Q ++M         I+++   S     
Sbjct: 420 PDGKQLLLTASPEAFDGIGKNCGNHPIANDFDSQAFIMDLATRKIDPITKEFNPSVNFLQ 479

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           W+     I F+    +   I      D   E+L +E     A   S +  SL     +  
Sbjct: 480 WNKGDGCIYFSTNDEDCRNIYRYSPKDRKFEKLNLETDVTSAFAMSENNPSLAAYIGQGC 539

Query: 413 DTGSKLYSIDLNGRNETLINTP 434
                 Y  DL  +   LI  P
Sbjct: 540 YNAGVAYVYDLKKKTSRLIADP 561


>gi|53714700|ref|YP_100692.1| putative alanyl dipeptidyl peptidase [Bacteroides fragilis YCH46]
 gi|265765837|ref|ZP_06093878.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|52217565|dbj|BAD50158.1| putative alanyl dipeptidyl peptidase [Bacteroides fragilis YCH46]
 gi|263253505|gb|EEZ24970.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 845

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 84/262 (32%), Gaps = 52/262 (19%)

Query: 218 RFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             SP+ + +   Y         R Y   T +      + N R  +   R+     +   +
Sbjct: 212 SVSPDGKYLLTRYWDNHSLKRSRTYCELTELKTGKVLLTNLRDGM---RWMPKSNKLYYT 268

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS------------------SQIV 317
           V   E  D+ ++D  +   E L   +      S+SP+                    +IV
Sbjct: 269 VVAPEGNDVITLDPVTLKEEVLLRGI-PEQGFSWSPNEDFLIYYPREEGVKDEGPLKRIV 327

Query: 318 FESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------F 366
             +DR     G+  L          +R++     S +    SP G  + ++         
Sbjct: 328 SPADRIPNTRGRSFLARYDIASGTSERLTY-GNHSTYMQDISPDGKYLLYSSSKENITQR 386

Query: 367 SGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-------------- 411
                ++  +  +  + + L  ED  L   ++SP G+ L+ +   +              
Sbjct: 387 PFSLSSLFQVNLETLAVDTLFFEDRFLGGASYSPDGKQLLLTASPEAFDGIGKNCGNHPI 446

Query: 412 -GDTGSKLYSIDLNGRNETLIN 432
             D  S+ + +DL  R    I 
Sbjct: 447 ANDFDSQAFIMDLATRKIDPIT 468



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 83/262 (31%), Gaps = 45/262 (17%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRI---------------DRAPKRIGNFR 257
            +SPN+  + Y        D+  + R+     RI                   +R+    
Sbjct: 300 SWSPNEDFLIYYPREEGVKDEGPLKRIVSPADRIPNTRGRSFLARYDIASGTSERLTYGN 359

Query: 258 SMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYS 310
                   S +GK  L S  K+           ++ V+L++ A + L         ASYS
Sbjct: 360 HSTYMQDISPDGKYLLYSSSKENITQRPFSLSSLFQVNLETLAVDTLFFEDRFLGGASYS 419

Query: 311 PDSSQIVFESDRE-----GKE------------QLYVMQSNGSDQKRISQDKEASYFDPV 353
           PD  Q++  +  E     GK             Q ++M         I+++   S     
Sbjct: 420 PDGKQLLLTASPEAFDGIGKNCGNHPIANDFDSQAFIMDLATRKIDPITKEFNPSVNFLQ 479

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           W+     I F+    +   I      D   E+L +E     A   S +  SL     +  
Sbjct: 480 WNKGDGCIYFSTNDEDCRNIYRYSPKDRKFEKLNLETDVTSAFAMSENNPSLAAYIGQGC 539

Query: 413 DTGSKLYSIDLNGRNETLINTP 434
                 Y  DL  +   LI  P
Sbjct: 540 YNAGVAYVYDLKKKTSRLIADP 561


>gi|330005229|ref|ZP_08305187.1| conserved domain protein [Klebsiella sp. MS 92-3]
 gi|328536330|gb|EGF62693.1| conserved domain protein [Klebsiella sp. MS 92-3]
          Length = 161

 Score = 63.5 bits (153), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 57/162 (35%), Gaps = 23/162 (14%)

Query: 280 EAMDIYSVDLQSNATERLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQLY 329
                        +  RLT T        +N+   +   +P ++ I F   D  G  QL+
Sbjct: 8   GTATTMPAPPAGVSQRRLTFTHHRRYPGLVNVPRHWVRANPQATAIAFLMRDDAGVVQLW 67

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++   G + ++++           W P G+ + F         I            L + 
Sbjct: 68  LISPQGGEPRQLTHHASGIQSAFNWHPSGEWLGFALED----RIACCHAGTGDITFLTDT 123

Query: 390 SNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +  AP+     +SP G+ + +  + DG    +L+ +   GR
Sbjct: 124 -HAHAPSADAIVFSPDGKQIAWMEEVDGYR--QLW-VTQTGR 161



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 47/114 (41%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  +++++L+  +     +   +   +  A  +  +G+    +++   
Sbjct: 48  PQATAIAFLMRDDAGVVQLWLISPQGGEPRQLTHHASGIQSAFNWHPSGEWLGFALE--- 104

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I      +     LT+T     SA    +SPD  QI +  + +G  QL+V 
Sbjct: 105 -DRIACCHAGTGDITFLTDTHAHAPSADAIVFSPDGKQIAWMEEVDGYRQLWVT 157


>gi|332084878|gb|EGI90061.1| hypothetical protein SB521682_4356 [Shigella boydii 5216-82]
          Length = 337

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 72/203 (35%), Gaps = 41/203 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA----LISVQKDEAMD--IYSVDLQSNAT-----------E 295
           +GN     +    S  G++     ++ + +DEA         L    T            
Sbjct: 144 VGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKAAGEAPLSGTETTLPAPPRGVVQR 203

Query: 296 RLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT  +        N+   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 204 RLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 263

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I        +   L E      +  A  +SP G
Sbjct: 264 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDG 319

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN 424
           + L +        G +L+S + +
Sbjct: 320 QWLAWME------GGQLWSTETD 336



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 225 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 284

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVF 318
                 I     QS   E LT       SA    +SPD   + +
Sbjct: 285 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW 324



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +    D 
Sbjct: 231 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 285

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 286 RIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW 324


>gi|297159800|gb|ADI09512.1| WD-40 repeat protein [Streptomyces bingchenggensis BCW-1]
          Length = 167

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 6/121 (4%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              R         +    FSP+ + +A  + D      V L D    +    +      +
Sbjct: 4   GRPRSAPVGHGDYVTSVAFSPDGRTLASGSSDK----TVRLWDVATGKRRATLTGHSDFV 59

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +  FS +G+    S   D  + ++ V         LT    +  S ++SPD   +   S
Sbjct: 60  TSVAFSPDGRTLA-SGSDDTTVRLWDV-ATGRPRTTLTEHSAVVRSVAFSPDGRTLATAS 117

Query: 321 D 321
           D
Sbjct: 118 D 118



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 39/123 (31%), Gaps = 7/123 (5%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
             R           + +  FS +G+    S   D+ + ++  D+ +      LT      
Sbjct: 3   TGRPRSAPVGHGDYVTSVAFSPDGRTLA-SGSSDKTVRLW--DVATGKRRATLTGHSDFV 59

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPD   +   SD      + +        +    +  A      +SP G  +A  
Sbjct: 60  TSVAFSPDGRTLASGSD---DTTVRLWDVATGRPRTTLTEHSAVVRSVAFSPDGRTLATA 116

Query: 365 KFS 367
              
Sbjct: 117 SDD 119



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 42/124 (33%), Gaps = 7/124 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S ++SPD   +   S     + + +       ++              +SP G 
Sbjct: 13  HGDYVTSVAFSPDGRTLASGSS---DKTVRLWDVATGKRRATLTGHSDFVTSVAFSPDGR 69

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +A +        +  +     +  L    + +++  +SP GR+L  +     D   +L+
Sbjct: 70  TLA-SGSDDTTVRLWDVATGRPRTTLTEHSAVVRSVAFSPDGRTLATASD---DKTVRLW 125

Query: 420 SIDL 423
            + L
Sbjct: 126 DVSL 129



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 47/122 (38%), Gaps = 7/122 (5%)

Query: 170 KGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            GD+ + + F     ++ SG    ++ + D      R         +    FSP+ + +A
Sbjct: 13  HGDYVTSVAFSPDGRTLASGSSDKTVRLWDVATGKRRATLTGHSDFVTSVAFSPDGRTLA 72

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D      V L D    R    +    +++ +  FS +G+    +   D+ + ++ V
Sbjct: 73  SGSDDT----TVRLWDVATGRPRTTLTEHSAVVRSVAFSPDGRTLA-TASDDKTVRLWDV 127

Query: 288 DL 289
            L
Sbjct: 128 SL 129


>gi|312200414|ref|YP_004020475.1| NB-ARC domain protein [Frankia sp. EuI1c]
 gi|311231750|gb|ADP84605.1| NB-ARC domain protein [Frankia sp. EuI1c]
          Length = 1380

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 53/352 (15%), Positives = 101/352 (28%), Gaps = 56/352 (15%)

Query: 77   DVFNLISQDSFKQKITNPDSIPR-FQDWNSLGAQV-LVTGRVIKEGKDRLRVEFRLWDVK 134
                +    +   +   P    R      S G+   L  G     G   +    RLWD +
Sbjct: 1033 GTVRMWDPAAVGAERAEPVGRIRGVTAIESAGSDGWLAVGS----GDGVI----RLWDAQ 1084

Query: 135  DRKQ-------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV-- 185
               +           +  ++P+  R +A ++ DD    +   +   ++R+     +    
Sbjct: 1085 AGAERAALTGHPASVRALAAPSDGRWLA-SLDDDNVARVWDPREGAHTRLASAGLTTRVS 1143

Query: 186  ------------SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                        SG     + + D      R + P   Q +       +   +A      
Sbjct: 1144 ALLADPRGSWLASGGPDAVVRLWDPVSGAERAVLPGHGQGVLALAAPADGSWLA----SA 1199

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRF---SSNGKRALISVQKDEAMDIYSVDLQ 290
                 V + D    +    +  F       ++   + NG     S   D  + I+ V   
Sbjct: 1200 GGDATVRVWDPAEGQGASPLHVFDGHTSRVQWLAAAPNGSWLA-SAGIDGTIRIWDV--- 1255

Query: 291  SNATERLTNTLFINISASYS----PDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDK 345
               T RL   L  ++   ++    PD S +       G +  + +    G  ++ +    
Sbjct: 1256 GTGTRRLV--LGGDLHDVWALAAAPDGSWLA----SGGADACVRIWDPVGGVERHVLTGH 1309

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                     SP G  IA          I      G+   ++  D  LQ   W
Sbjct: 1310 REGVVALAVSPDGAWIASVSSRDRTARIWT--PGGTAATMIRLDGALQCCRW 1359



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 71/247 (28%), Gaps = 25/247 (10%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
              G    ++ + +     +R++ PS    +      P+   +A    D      + + D 
Sbjct: 807  SGGAGDGTVRIWNTADGTLRHVLPSAGAWISAMAVGPDGHWLAVGAGDG----SLRVWDP 862

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS---VDLQSNATERLTNTL 301
                           +        G     S   D  + +++   +  + ++        
Sbjct: 863  ATGACSASTQAHAGWVSELAVEPGGSWLA-SGGGDGTVRLWAPAALLAEGSSPPAPPARP 921

Query: 302  FINISASY------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                  +       +PD S +       G  ++ +       ++R+           V +
Sbjct: 922  SGAGGPAGPATLVAAPDGSWLA---SGGGDGRVRLWDPVHGVERRVLSGHAGDVTALVVA 978

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGD 413
            P G  +A     G    I V       +R+LV        A   +P+G  L       GD
Sbjct: 979  PDGSWLASAAGDGT---IQVADPRAVSDRVLVPGHARPAHALVAAPNGSWLA---SAGGD 1032

Query: 414  TGSKLYS 420
               +++ 
Sbjct: 1033 GTVRMWD 1039



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 41/133 (30%), Gaps = 7/133 (5%)

Query: 289 LQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           L +     L       +SA + S D S +   +DR+G  +++      S  +        
Sbjct: 735 LPTGGERVLRAGHSGPVSALAASRDGSWLA-SADRDGTVRIW--DVETSRLRHTLTGHSG 791

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                V +P G  +A          I        +  L    + + A    P G  L   
Sbjct: 792 RVAILVAAPDGSWLASGGAGDGTVRIWNTADGTLRHVLPSAGAWISAMAVGPDGHWLAVG 851

Query: 408 RKKDGDTGSKLYS 420
               GD   +++ 
Sbjct: 852 A---GDGSLRVWD 861


>gi|91217357|ref|ZP_01254317.1| Dipeptidyl aminopeptidase [Psychroflexus torquis ATCC 700755]
 gi|91184465|gb|EAS70848.1| Dipeptidyl aminopeptidase [Psychroflexus torquis ATCC 700755]
          Length = 715

 Score = 63.5 bits (153), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 59/388 (15%), Positives = 137/388 (35%), Gaps = 42/388 (10%)

Query: 67  EVVSKDLQRSDVFNLI--SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           ++V  D  RS   +++  +     +    P +I  ++ W+    ++L+     K  +   
Sbjct: 38  DIVKYD-ARSGTRSVLVSANQLIPEGKNEPITISDYK-WSLDNNKLLLFTNTRKVWRYHT 95

Query: 125 RVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIY-QSITGEKGDFNSRILFVSE 182
           R ++ + D+K  K + +G+   ++   + K +   S   Y   +     +  S  +    
Sbjct: 96  RGDYWVLDLKTNKLVRLGQSLPTATLMFAKFSPDASKVAYVSELNIYSENLESHKIDQIT 155

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G I N                  RD      R+SP+ + +AY   D +D+   Y++
Sbjct: 156 KDGGGNIINGTFDWVY-----EEELNCRDGF----RWSPDGENIAYWQSDTKDVGTFYII 206

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNT 300
           +       K I      +        G            + +  V +   AT+  ++   
Sbjct: 207 NNVDSIYSKPIPLPYPKV--------GTEL-------STVKVGVVSVDGGATKWFKVPGD 251

Query: 301 LFINISAS--YSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--- 353
              N  A   + P+S +++ +  + R+   +++V      +   I  +K+ ++ D     
Sbjct: 252 PKNNYLARMDFIPNSKEVMIQQLNRRQNTNKIWVGDIENMELTTIMTEKDEAFLDIHDDV 311

Query: 354 -WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKK 410
            W        ++        +  + +DG   + + +      +  +  P G  + +    
Sbjct: 312 RWLENEKYFTWSSERDGWLHLYKVSRDGKVIQPITKGDFDVVEINSIDPKGGYVYYIASP 371

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYAS 438
           D  T   LY   ++G+ +    TP+  S
Sbjct: 372 DNFTQRYLYRSRIDGKGDAERITPSTNS 399


>gi|327250830|gb|EGE62532.1| hypothetical protein ECSTEC7V_4373 [Escherichia coli STEC_7v]
          Length = 404

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 74/203 (36%), Gaps = 41/203 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA----LISVQKDEAMDIYSVDL-------------QSNATE 295
           +GN     +   FS  G++     ++ + +DEA    + D              +     
Sbjct: 211 VGNHALAFIGDTFSPKGEKVPELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQR 270

Query: 296 RLTNT------LFINISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT T        +N+   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 271 RLTFTHQRAYPGVVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 330

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I        +   L E      +  A  +SP G
Sbjct: 331 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDG 386

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN 424
           + L +        G +L+  + +
Sbjct: 387 QWLAWME------GGQLWITETD 403



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 305 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 363 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 391


>gi|331675185|ref|ZP_08375938.1| conserved hypothetical protein [Escherichia coli TA280]
 gi|331067630|gb|EGI39032.1| conserved hypothetical protein [Escherichia coli TA280]
          Length = 416

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP GR L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGRWLAWME------GGQLWITETD 415



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGRWLAW---MEGG-QLWITETD 415



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGRWLAW 403


>gi|291236498|ref|XP_002738173.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 475

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 78/224 (34%), Gaps = 10/224 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG + ++L V +       Y        +    FSP+   VA A+ D      V L    
Sbjct: 35  SGAMDSNLMVWNFKPQMRAYRFVGHKDAIMGVHFSPSGHLVASASRDK----TVRLWIPS 90

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           +           + + +  FS +G+  + +   D+ + I++V  Q      L+       
Sbjct: 91  VKGESTVFKAHTATVRSVEFSPDGQHLV-TASDDKTVKIWAVHRQ-RFQFSLSQHQNWVR 148

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A +SPD   IV  SD    + + +      +      +         + P G  IA   
Sbjct: 149 CAKWSPDGRLIVSGSD---DKTVRIWDRTSKECVHTFFEHGGFVNFVAFHPSGTCIA-AA 204

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            +     +  ++ +   +      S + + ++ PSG  LI +  
Sbjct: 205 GTDSTVKVWDIRMNKLLQHYQAHTSAVNSLSFHPSGNYLITASN 248



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 6/151 (3%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             R  + +  F+ N K+   S   D  + +++   Q  A   + +   I +   +SP   
Sbjct: 16  GHRDTVTSVDFNPNMKQLA-SGAMDSNLMVWNFKPQMRAYRFVGHKDAI-MGVHFSPSG- 72

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +V  + R+   +L++    G     + +   A+     +SP G  +  T    +   I 
Sbjct: 73  HLVASASRDKTVRLWIPSVKGEST--VFKAHTATVRSVEFSPDGQHLV-TASDDKTVKIW 129

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            + +   Q  L    + ++   WSP GR ++
Sbjct: 130 AVHRQRFQFSLSQHQNWVRCAKWSPDGRLIV 160



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/272 (13%), Positives = 81/272 (29%), Gaps = 33/272 (12%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++   F     ++R + H   D I        G            V S     ++ +   
Sbjct: 42  LMVWNFKPQMRAYRFVGHK--DAIMGVHFSPSG----------HLVASASRDKTVRLWIP 89

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
                  +  +    +    FSP+ Q +  A+ D      V +      R    +   ++
Sbjct: 90  SVKGESTVFKAHTATVRSVEFSPDGQHLVTASDDK----TVKIWAVHRQRFQFSLSQHQN 145

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIV 317
            +   ++S +G R ++S   D+ + I+  D  S                 ++ P  + I 
Sbjct: 146 WVRCAKWSPDG-RLIVSGSDDKTVRIW--DRTSKECVHTFFEHGGFVNFVAFHPSGTCIA 202

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     + V     +   +  Q   ++     + P G+ +           + ++ 
Sbjct: 203 AA---GTDSTVKVWDIRMNKLLQHYQAHTSAVNSLSFHPSGNYLITASNDSTLKILDLL- 258

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               + RL       Q P       ++ FSR 
Sbjct: 259 ----EGRLFYTLHGHQGPA-----TAVAFSRS 281



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 50/147 (34%), Gaps = 11/147 (7%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQ 357
                 S  ++P+  Q+       G     +M  N   Q R  +    + +     +SP 
Sbjct: 17  HRDTVTSVDFNPNMKQLA-----SGAMDSNLMVWNFKPQMRAYRFVGHKDAIMGVHFSPS 71

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G L+A      +   + +    G         + +++  +SP G+ L+ +     D   K
Sbjct: 72  GHLVASASRD-KTVRLWIPSVKGESTVFKAHTATVRSVEFSPDGQHLVTASD---DKTVK 127

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           ++++       +L     +    +W  
Sbjct: 128 IWAVHRQRFQFSLSQHQNWVRCAKWSP 154


>gi|262040454|ref|ZP_06013697.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259042207|gb|EEW43235.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 221

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 19/159 (11%)

Query: 280 EAMDIYSVDLQSNATERLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQLY 329
                        +  RLT T        +N+   +   +P ++ I F   D  G  QL+
Sbjct: 70  GTATTMPAPPAGVSQRRLTFTHHRRYPGLVNVPRHWVRANPQATAIAFLMRDDAGVVQLW 129

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++   G + ++++           W P G+ + F         I            L + 
Sbjct: 130 LISPQGGEPRQLTHHASGIQSAFNWHPSGEWLGFALED----RIACCHAGTGDITFLTDT 185

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              +  A  +SP G+ + +  + DG    +L+ +   GR
Sbjct: 186 HAPSADAIVFSPDGKQIAWMEEVDGYR--QLW-VTQTGR 221



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 47/112 (41%), Gaps = 5/112 (4%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  +++++L+  +     +   +   +  A  +  +G+    +++   
Sbjct: 110 PQATAIAFLMRDDAGVVQLWLISPQGGEPRQLTHHASGIQSAFNWHPSGEWLGFALE--- 166

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVM 331
              I      +     LT+T   +  A  +SPD  QI +  + +G  QL+V 
Sbjct: 167 -DRIACCHAGTGDITFLTDTHAPSADAIVFSPDGKQIAWMEEVDGYRQLWVT 217


>gi|323450136|gb|EGB06019.1| hypothetical protein AURANDRAFT_29985 [Aureococcus anophagefferens]
          Length = 250

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 64/217 (29%), Gaps = 16/217 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             VVSG    ++ V D                ++     P+ ++V   ++D      V +
Sbjct: 32  RRVVSGSGDKTVKVWDAATGECVATLAGHSDEVWCVAVFPDGRRVVSGSHDK----TVKV 87

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
            D         +     ++       +G+R ++S   D+ + ++  D+ +      L   
Sbjct: 88  WDAATGECVATLAGHSDLVNGVAVFPDGRR-VVSGSSDKTVKVW--DVATGECVATLAEH 144

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S +  PD  ++V  S       + V  +   +          +       P G  
Sbjct: 145 SNYVWSVAVFPDGRRVVSGS---WDNMVKVWDAATGECVATLAGHSGNVIGVAVFPDGRR 201

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +           + V      +    +E    + P W
Sbjct: 202 VVSGSVDQT---VKVWDAATGECVATLEG--HRGPVW 233



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 56/175 (32%), Gaps = 11/175 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             VVSG    ++ V D               ++      P+ ++V   + D      V +
Sbjct: 74  RRVVSGSHDKTVKVWDAATGECVATLAGHSDLVNGVAVFPDGRRVVSGSSDK----TVKV 129

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
            D         +    + + +     +G+R ++S   D  + ++  D  +      L   
Sbjct: 130 WDVATGECVATLAEHSNYVWSVAVFPDGRR-VVSGSWDNMVKVW--DAATGECVATLAGH 186

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
               I  +  PD  ++V  S     + + V  +   +     +      +  V+S
Sbjct: 187 SGNVIGVAVFPDGRRVVSGSV---DQTVKVWDAATGECVATLEGHRGPVWRGVFS 238



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/168 (11%), Positives = 49/168 (29%), Gaps = 8/168 (4%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERL 297
           + + D         +      +       +G+R ++S   D+ + ++  D  +      L
Sbjct: 1   IKVWDAATGECVATLDGLSRAVNCVAVFPDGRR-VVSGSGDKTVKVW--DAATGECVATL 57

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                     +  PD  ++V  S     + + V  +   +                  P 
Sbjct: 58  AGHSDEVWCVAVFPDGRRVVSGSH---DKTVKVWDAATGECVATLAGHSDLVNGVAVFPD 114

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           G  +  +  S +   +  +        L    + + +    P GR ++
Sbjct: 115 GRRVV-SGSSDKTVKVWDVATGECVATLAEHSNYVWSVAVFPDGRRVV 161


>gi|307292823|ref|ZP_07572669.1| peptidase S9B dipeptidylpeptidase IV domain protein [Sphingobium
           chlorophenolicum L-1]
 gi|306880889|gb|EFN12105.1| peptidase S9B dipeptidylpeptidase IV domain protein [Sphingobium
           chlorophenolicum L-1]
          Length = 738

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 85/254 (33%), Gaps = 65/254 (25%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           ++ R   R     S I++  ++ +GK  L+ V  D  + + ++D       RLT+T    
Sbjct: 100 KMQRERDRSVAGNSGIVSYDWAPDGKSILVPV--DGDLYLAALD---GKVTRLTDTPDGE 154

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------- 353
           ++   SP    + F   R G    + +Q  G   K+++Q    +    V           
Sbjct: 155 LNGVVSPRGGFVSFV--RGGD---FFVQPMGGTAKQLTQGSSDTVSWGVAEFVAQEEMDR 209

Query: 354 -----WSPQGDLIAFTKFSGEKF------------------------------AIGVMKK 378
                WSP   LIA  +                                     + VMK 
Sbjct: 210 RTGYWWSPDDRLIAVARVDEGPVGTVTRTAIGGEGTKVYAQRYPAAGTPNALVDLYVMKP 269

Query: 379 DGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINT 433
           DGS +  +      D  L    WS  GR+L   R+        L ++D   GR+  ++  
Sbjct: 270 DGSGQVKVDLGAERDIYLARVDWSKDGRTLYVQRESRDQKVLDLLAVDPATGRSRVILTE 329

Query: 434 PAYASDPQWVGFMD 447
            A      W+   +
Sbjct: 330 KAK----SWINLSN 339



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 54/346 (15%), Positives = 114/346 (32%), Gaps = 66/346 (19%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR- 218
           D     +T       + ++      VS +      V    G   +    S D + +    
Sbjct: 141 DGKVTRLTDTPDGELNGVVSPRGGFVSFVRGGDFFVQPMGGTAKQLTQGSSDTVSWGVAE 200

Query: 219 --------------FSPNQQKVAYATYDDEDILRV------------------------- 239
                         +SP+ + +A A  D+  +  V                         
Sbjct: 201 FVAQEEMDRRTGYWWSPDDRLIAVARVDEGPVGTVTRTAIGGEGTKVYAQRYPAAGTPNA 260

Query: 240 ----YLMDTRIDRAPKR-IGNFRSMILA-PRFSSNGKRALISV-QKDEA-MDIYSVDLQS 291
               Y+M        K  +G  R + LA   +S +G+   +    +D+  +D+ +VD  +
Sbjct: 261 LVDLYVMKPDGSGQVKVDLGAERDIYLARVDWSKDGRTLYVQRESRDQKVLDLLAVDPAT 320

Query: 292 NATERLTNTLF---INISASYSP--DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
             +  +        IN+S +++P  D S  ++ S+R G   LY ++  G     +++  E
Sbjct: 321 GRSRVILTEKAKSWINLSNNFTPLKDGS-FLWWSERTGHGHLYHVR--GGKWTALTR-GE 376

Query: 347 ASYFDPVWSPQGDLIAF---TKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSG- 401
               D V   +G  I +    + +  +  +           R L              G 
Sbjct: 377 WEVRDLVGVDEGRGIVYFTGNRETPLEQQLYAAPLAKAGPLRQLTATGWWNDAVM--DGA 434

Query: 402 -RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
              ++ +R  + D   ++Y  D  G+    ++  A  +D  +  ++
Sbjct: 435 ASRIVVARS-NADQPRQVYLADSAGKQLNWLSENAIRADHPYAPYL 479



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 35/109 (32%)

Query: 355 SPQGDLIAFTKFS---GEKFAIGVMKKDGSQERLLVED---------------------- 389
           SP G L+   K      E+  +  +      ER+LV+                       
Sbjct: 49  SPDGKLVTLLKPRADEKERLDLWAIDTSTGAERMLVDSKKTGSGAELSEAEKMQRERDRS 108

Query: 390 ----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               S + +  W+P G+S++            LY   L+G+   L +TP
Sbjct: 109 VAGNSGIVSYDWAPDGKSILV------PVDGDLYLAALDGKVTRLTDTP 151


>gi|188993537|ref|YP_001905547.1| TolB-like protein [Xanthomonas campestris pv. campestris str. B100]
 gi|167735297|emb|CAP53511.1| TolB-like protein [Xanthomonas campestris pv. campestris]
          Length = 293

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 61/191 (31%), Gaps = 25/191 (13%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATERLT----NTLFINI 305
           + +  +       S +G+R + +  +       D++   L     ++ T    NT     
Sbjct: 33  VVSTPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLVGGRWQQATPLPLNTAQDET 92

Query: 306 SASYSPDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSP 356
           +  +S D   ++F S R    G   LY +  +   Q    Q      +  ++   P  S 
Sbjct: 93  TPVFSADGRWLLFASTRAGGVGGSDLYRLPVDAQGQLGAVQSLGPAINSRSNETAPTLSL 152

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLIFS 407
            G  + F            + V   +GS          + +        W   GR+L+++
Sbjct: 153 DGTALLFASDGHGGAGGLDLFVAHWNGSAFIAPAALGEVNSAADERDAAWLGDGRALVWA 212

Query: 408 RKKDGDTGSKL 418
           R         L
Sbjct: 213 RGTSAGPSQLL 223



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 24/170 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ---DKEASYFDP 352
           +T      A+ SPD  +IV+ SDR    G   L+  Q  G   ++ +    +       P
Sbjct: 35  STPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLVGGRWQQATPLPLNTAQDETTP 94

Query: 353 VWSPQGDLIAFTKFSGEKF---AIGVMKKD-----GSQERL---LVEDSNLQAPTWSPSG 401
           V+S  G  + F            +  +  D     G+ + L   +   SN  APT S  G
Sbjct: 95  VFSADGRWLLFASTRAGGVGGSDLYRLPVDAQGQLGAVQSLGPAINSRSNETAPTLSLDG 154

Query: 402 RSLIFSRK-KDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
            +L+F+     G  G  L+    NG           +N+ A   D  W+G
Sbjct: 155 TALLFASDGHGGAGGLDLFVAHWNGSAFIAPAALGEVNSAADERDAAWLG 204



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 65/168 (38%), Gaps = 22/168 (13%)

Query: 220 SPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ Q++ +A+         D+ +  L+  R  +A     N       P FS++G+  L 
Sbjct: 46  SPDGQRIVWASDRAGGAGGWDLWQAQLVGGRWQQATPLPLNTAQDETTPVFSADGRWLLF 105

Query: 275 SVQKD---EAMDIYSVDLQS----NATERL---TNTLFINISASYSPDSSQIVFESDREG 324
           +  +       D+Y + + +     A + L    N+     + + S D + ++F SD  G
Sbjct: 106 ASTRAGGVGGSDLYRLPVDAQGQLGAVQSLGPAINSRSNETAPTLSLDGTALLFASDGHG 165

Query: 325 KEQ---LYVMQSNGSDQKRISQDKEASY----FDPVWSPQGDLIAFTK 365
                 L+V   NGS     +   E +      D  W   G  + + +
Sbjct: 166 GAGGLDLFVAHWNGSAFIAPAALGEVNSAADERDAAWLGDGRALVWAR 213



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 48/180 (26%), Gaps = 28/180 (15%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTP---SRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +     G     L      G   +  TP   +  Q    P FS + + + +A+     + 
Sbjct: 55  ASDRAGGAGGWDLWQAQLVGGRWQQATPLPLNTAQDETTPVFSADGRWLLFASTRAGGVG 114

Query: 238 RVYLMDTRIDRAPKRIG--------NFRSMILAPRFSSNGKRALISVQKDE--------- 280
              L    +D   +           N RS   AP  S +G   L +              
Sbjct: 115 GSDLYRLPVDAQGQLGAVQSLGPAINSRSNETAPTLSLDGTALLFASDGHGGAGGLDLFV 174

Query: 281 ---AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGS 336
                  +             N+      A++  D   +V+      G  QL +    G 
Sbjct: 175 AHWNGSAFIAPAALGEV----NSAADERDAAWLGDGRALVWARGTSAGPSQLLLAACKGG 230



 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 12/73 (16%)

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKK-DGDTGSKLYSIDL-NGRNETLI----------N 432
           ++   +N    T SP G+ ++++  +  G  G  L+   L  GR +              
Sbjct: 33  VVSTPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLVGGRWQQATPLPLNTAQDET 92

Query: 433 TPAYASDPQWVGF 445
           TP +++D +W+ F
Sbjct: 93  TPVFSADGRWLLF 105


>gi|240277517|gb|EER41025.1| WD40 domain-containing protein [Ajellomyces capsulatus H143]
          Length = 635

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 16/167 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  K+A           V + D        R+ +    +    +S +  +  IS  +
Sbjct: 320 FSHDGTKLATT----GRENIVIIYDVATFSVIHRLTDHGGPVAYATWSPDDSKL-ISCSQ 374

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D    ++  D+++     LT  +      SA+++P+    V     + + QL      G 
Sbjct: 375 DYKARLW--DVETGHCI-LTIDHHHEPVTSAAWAPNGDSFV-TGSLDCQSQLCHWSVAGE 430

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                    +    D   SP G  +           I V   +   E
Sbjct: 431 SL--YKWTGQYRVRDCAISPDGRRLIAISTEK---RIYVYNFETRGE 472



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 13/165 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G +   + +++    +   D+ + +   RLT+       A++SPD S+++  S  +
Sbjct: 320 FSHDGTKLATTGREN---IVIIYDVATFSVIHRLTDHGGPVAYATWSPDDSKLISCSQ-D 375

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            K +L+                        W+P GD          +  +      G   
Sbjct: 376 YKARLW--DVETGHCILTIDHHHEPVTSAAWAPNGDSFVTGSLDC-QSQLCHWSVAGESL 432

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                   ++    SP GR LI    +      ++Y  +   R E
Sbjct: 433 YKWTGQYRVRDCAISPDGRRLIAISTEK-----RIYVYNFETRGE 472



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 69/217 (31%), Gaps = 16/217 (7%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG--EKGDFNSRILFVSESVVSG 187
           L D   + QI    + ++       +    D     +    E  +    + ++  S    
Sbjct: 266 LLDQVKQTQINQCLYHNTAEPPSLYSDHQCDRAQFPLRTSFELSEHTDEVWYLEFSHDGT 325

Query: 188 I-----IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
                  +N + + D    ++ +        +    +SP+  K+   + D +      L 
Sbjct: 326 KLATTGRENIVIIYDVATFSVIHRLTDHGGPVAYATWSPDDSKLISCSQDYK----ARLW 381

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D         I +    + +  ++ NG    ++   D    +    +   +  + T   +
Sbjct: 382 DVETGHCILTIDHHHEPVTSAAWAPNGDS-FVTGSLDCQSQLCHWSVAGESLYKWT-GQY 439

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                + SPD  +++  S     +++YV       ++
Sbjct: 440 RVRDCAISPDGRRLIAISTE---KRIYVYNFETRGEE 473


>gi|213410445|ref|XP_002175992.1| transcriptional repressor tup12 [Schizosaccharomyces japonicus
           yFS275]
 gi|212004039|gb|EEB09699.1| transcriptional repressor tup12 [Schizosaccharomyces japonicus
           yFS275]
 gi|273068498|gb|ACZ97556.1| Tup12 protein [Schizosaccharomyces japonicus]
          Length = 576

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 70/199 (35%), Gaps = 22/199 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + + +A    D     ++ + D    R  + +      I +  +S +GK  +    
Sbjct: 331 AFSADGKYLATGVEDR----QIRIWDIAQKRVHRLLSGHEQEIYSLDYSRDGKYLV---S 383

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 +Y   +++   + + +T     + ++SPDS  I   S     + + +   NG+ 
Sbjct: 384 GSGDRTVYLWSVETGQRKLVLHTDDGITTVAFSPDSQYIAAGSL---DKVIRIWSINGTL 440

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---- 393
            +++   +E S +   +SP G  +A            +    G     +      +    
Sbjct: 441 LEQLVGHQE-SVYSVAFSPDGLTLASGSLDNTIKLWELQSAAGVPTNAIKPGGICKKTFT 499

Query: 394 -------APTWSPSGRSLI 405
                  +   SP G+ ++
Sbjct: 500 GHKNYILSVALSPDGKWIV 518



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 70/207 (33%), Gaps = 14/207 (6%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-I 260
           N+ +       I    +FS + + +A        +  V           +       + +
Sbjct: 269 NLLHTLEHTSVICCV-KFSHDGKLLATGCNRAALVFSVETGQLLTHLQEESSEKEGDLYV 327

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFE 319
            +  FS++GK    +  +D  + I+  D+      RL +       S  YS D   +V  
Sbjct: 328 RSVAFSADGKYLA-TGVEDRQIRIW--DIAQKRVHRLLSGHEQEIYSLDYSRDGKYLVSG 384

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S   G   +Y+       +K +    +       +SP    IA          I +   +
Sbjct: 385 S---GDRTVYLWSVETGQRKLVLHTDDG-ITTVAFSPDSQYIAAGSLDK---VIRIWSIN 437

Query: 380 GSQERLLV-EDSNLQAPTWSPSGRSLI 405
           G+    LV    ++ +  +SP G +L 
Sbjct: 438 GTLLEQLVGHQESVYSVAFSPDGLTLA 464



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 64/184 (34%), Gaps = 44/184 (23%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G     V   LW V+  +              RK+     D I           
Sbjct: 378 GKYLVSGSGDRTV--YLWSVETGQ--------------RKLVLHTDDGI----------- 410

Query: 174 NSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            + + F   S+ + +G +   + +   +G  +  L   ++ +     FSP+   +A  + 
Sbjct: 411 -TTVAFSPDSQYIAAGSLDKVIRIWSINGTLLEQLVGHQESVYSV-AFSPDGLTLASGSL 468

Query: 232 DDEDILRVYLMDTRIDRAPKRI----------GNFRSMILAPRFSSNGKRALISVQKDEA 281
           D  + ++++ + +        I             ++ IL+   S +GK  + S  KD  
Sbjct: 469 D--NTIKLWELQSAAGVPTNAIKPGGICKKTFTGHKNYILSVALSPDGKWIV-SGSKDRT 525

Query: 282 MDIY 285
           +  +
Sbjct: 526 VQFW 529


>gi|88858233|ref|ZP_01132875.1| Dipeptidyl peptidase IV [Pseudoalteromonas tunicata D2]
 gi|88819850|gb|EAR29663.1| Dipeptidyl peptidase IV [Pseudoalteromonas tunicata D2]
          Length = 761

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 63/191 (32%), Gaps = 49/191 (25%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------------- 264
           +FSP+  +V Y     ED  R  L +  +     R+      + +               
Sbjct: 67  KFSPDGSRVTYLQGKVEDYDRYDLWEYNLKDNTNRVLVDSEQLFSGTESLSDEEKARRER 126

Query: 265 ------------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                       +S +GK  L  +  D    +Y   L    +++LTNT      A +SP 
Sbjct: 127 QRIFGKGILEYTWSKDGKALLFPLNGD----LYYYSLLDGKSKKLTNTPEFETDARFSPK 182

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSP 356
              + F  +    + LY +      + +++QD   +  + +                W+ 
Sbjct: 183 GHFVSFIRE----QNLYALNIASGQEIKLTQDGGGTIKNGMAEFVAQEEMGRMTGYWWAG 238

Query: 357 QGDLIAFTKFS 367
               +AFT+  
Sbjct: 239 DESKVAFTRVD 249



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 71/195 (36%), Gaps = 37/195 (18%)

Query: 251 KRIGNFRSMIL-APR---FSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           +RI +   +   AP    FS +G R       V+  +  D++  +L+ N    L     +
Sbjct: 50  ERIFSDPGLAGKAPVKLKFSPDGSRVTYLQGKVEDYDRYDLWEYNLKDNTNRVL-----V 104

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +    +S             G E L   +    +++RI       Y    WS  G  + F
Sbjct: 105 DSEQLFS-------------GTESLSDEEKARRERQRIFGKGILEYT---WSKDGKALLF 148

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +G+ +   +   DG  ++L           +SP G  + F R+++      LY++++
Sbjct: 149 -PLNGDLYYYSL--LDGKSKKLTNTPEFETDARFSPKGHFVSFIREQN------LYALNI 199

Query: 424 NGRNETLINTPAYAS 438
               E  +      +
Sbjct: 200 ASGQEIKLTQDGGGT 214



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 52/138 (37%), Gaps = 38/138 (27%)

Query: 339 KRISQDKEASYFDPV---WSPQGDLIAFTKF---SGEKFAIGVMKKDGSQERLLVEDSNL 392
           +RI  D   +   PV   +SP G  + + +      +++ +       +  R+LV+   L
Sbjct: 50  ERIFSDPGLAGKAPVKLKFSPDGSRVTYLQGKVEDYDRYDLWEYNLKDNTNRVLVDSEQL 109

Query: 393 QA-------------------------PTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGR 426
            +                          TWS  G++L+F           LY   L +G+
Sbjct: 110 FSGTESLSDEEKARRERQRIFGKGILEYTWSKDGKALLF------PLNGDLYYYSLLDGK 163

Query: 427 NETLINTPAYASDPQWVG 444
           ++ L NTP + +D ++  
Sbjct: 164 SKKLTNTPEFETDARFSP 181



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 78/217 (35%), Gaps = 20/217 (9%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           +A  I ++IY     E   FN R  F      +  +   L V+     NI ++   +D+ 
Sbjct: 253 VAEAIRNEIYAE---EVKLFNQRYPF----TGTANVDIQLGVVSISDQNIEWIDLGKDKD 305

Query: 214 LFEPR--FSPNQQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILA--PRFS 266
           ++  R  +  + Q ++Y   D       LR Y   T+  +      +   + L    RF 
Sbjct: 306 IYLTRAKWLNDSQTLSYQWQDRAQQKLELRFYNSKTKQQKVAVTETSNTWINLHNDLRFL 365

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            + K  + + ++D    +Y          ++T   +I        + S IV+ + R    
Sbjct: 366 KDNKHFIWASERDGFKHLYLYRNNGQLVRQITQGDWIVDDIKGVDEKSGIVYFAGRVDSP 425

Query: 327 ---QLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGD 359
               LY          KRI+  ++ SY   V +    
Sbjct: 426 LESHLYQTSLFKKGSIKRIT--EQGSYHGIVMADDNK 460


>gi|170726578|ref|YP_001760604.1| peptidase S9 prolyl oligopeptidase [Shewanella woodyi ATCC 51908]
 gi|169811925|gb|ACA86509.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella woodyi ATCC 51908]
          Length = 684

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 96/253 (37%), Gaps = 26/253 (10%)

Query: 220 SPNQQKVAYAT----YDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           S +  K+AYA      + E    +Y+ D T  D   K++ +         FS++ K    
Sbjct: 44  SNDGNKLAYAVKKFDSEGEASSDLYIQDLTNPDSKAKQLTSAAGTEHNLAFSADDKTLYF 103

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FESDREGKEQLYVMQ 332
              +D +  +YS+ L      ++++          S DS Q+V       E K+      
Sbjct: 104 LAGRDGSSQLYSLSLSGGEAIQISDLPLDIEGFKLSQDSKQVVLNMRVFPECKDLACSKD 163

Query: 333 SNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLV 387
              ++ +R S  +E           WS       F    +G+K +  V    G       
Sbjct: 164 KFEAEAERKSTGREYKQLMVRHWDTWSDHSRSHLFVANLNGKKISTAVDVTAGLDTETPP 223

Query: 388 ED-SNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNG--------RNETLINT 433
           +  S ++  T++P G+ +++S K         T   L+ + + G         N+   + 
Sbjct: 224 KPFSGMEEVTFTPDGKYVVYSAKAPSKDQAWITNYDLWQVPVTGGKTVNLTEANKAWDSH 283

Query: 434 PAYASDPQWVGFM 446
           P Y++D +++ ++
Sbjct: 284 PTYSADGRYLAYL 296



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/299 (13%), Positives = 87/299 (29%), Gaps = 37/299 (12%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY---LTPSRDQILFEPRFSPNQQKV 226
             D N     V +    G   + L +  +D  N         S         FS + + +
Sbjct: 44  SNDGNKLAYAVKKFDSEGEASSDLYI--QDLTNPDSKAKQLTSAAGTEHNLAFSADDKTL 101

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----------S 275
            +      D        +       +I +    I   + S + K+ ++           +
Sbjct: 102 YFLA--GRDGSSQLYSLSLSGGEAIQISDLPLDIEGFKLSQDSKQVVLNMRVFPECKDLA 159

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             KD+              ++L      +    +S  S   +F ++  GK+    +    
Sbjct: 160 CSKDKFEAEAERKSTGREYKQLM-VRHWDT---WSDHSRSHLFVANLNGKKISTAVDVTA 215

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVE 388
                      +   +  ++P G  + ++  +          + +  +   G +   L E
Sbjct: 216 GLDTETPPKPFSGMEEVTFTPDGKYVVYSAKAPSKDQAWITNYDLWQVPVTGGKTVNLTE 275

Query: 389 DSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSI----DLNGRNETLINTPAYASDPQ 441
            +      PT+S  GR L +         +  Y I     + G+ + +   P +   P 
Sbjct: 276 ANKAWDSHPTYSADGRYLAYLAMTKPGFEADRYRIMLRDTVTGQEKEV--APLWDRSPS 332



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 68/190 (35%), Gaps = 29/190 (15%)

Query: 275 SVQKDEAMDIYSVDLQSNATER---LTNTLFINISA---------SYSPDSSQIVFESDR 322
           +        ++  +L          +T  L               +++PD   +V+ +  
Sbjct: 188 TWSDHSRSHLFVANLNGKKISTAVDVTAGLDTETPPKPFSGMEEVTFTPDGKYVVYSAKA 247

Query: 323 EGKEQLYVMQSN-------GSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----FSGEK 370
             K+Q ++   +       G     +++  +A    P +S  G  +A+       F  ++
Sbjct: 248 PSKDQAWITNYDLWQVPVTGGKTVNLTEANKAWDSHPTYSADGRYLAYLAMTKPGFEADR 307

Query: 371 FAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRN 427
           + I +      QE+ +    D +  + ++    R+L  + +  G     ++ ++   G  
Sbjct: 308 YRIMLRDTVTGQEKEVAPLWDRSPSSLSFGKDNRTLYVTAQDVGQV--SIFEVNTQFGDV 365

Query: 428 ETLINTPAYA 437
           +T+ N  + +
Sbjct: 366 KTVFNDGSNS 375



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 62/184 (33%), Gaps = 8/184 (4%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +      G +            + I    L  +   G     LT +       P +S + 
Sbjct: 231 EVTFTPDGKYVVYSAKAPSKDQAWITNYDLWQVPVTGGKTVNLTEANKAWDSHPTYSADG 290

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY          D  R+ L DT   +  +    +     +  F  + +   ++ Q  
Sbjct: 291 RYLAYLAMTKPGFEADRYRIMLRDTVTGQEKEVAPLWDRSPSSLSFGKDNRTLYVTAQDV 350

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
             + I+ V+ Q    + + N    +I      ++ +I+F      +   L+ +  +G   
Sbjct: 351 GQVSIFEVNTQFGDVKTVFNDGSNSIVGV---NNDKIIFNHKSLVQPGDLHSISFDGQGL 407

Query: 339 KRIS 342
           KR++
Sbjct: 408 KRLT 411


>gi|291571655|dbj|BAI93927.1| serine/threonine protein kinase with WD-40 repeats [Arthrospira
           platensis NIES-39]
          Length = 693

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 80/266 (30%), Gaps = 27/266 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    S+ + + +   +          +     SPN +++   ++D   +       T 
Sbjct: 402 SGSADQSIRLWNLNTGQLVQRFCGHVAAVNAIAISPNGRRLVSGSFDRNLLGWNLNTGTM 461

Query: 246 IDRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
            DR     G+  S    P     +S +G              I   + ++     RL   
Sbjct: 462 TDRFFSHSGSPYSHRCGPIHAVAYSPDGHIIA---SCSGNATIKLWNQRNGELLYRLREH 518

Query: 301 LF--INISASYSPDSSQI------------VFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                 ++ ++SP ++              +F S      Q+ + Q       +      
Sbjct: 519 SGEVFCVTFAFSPANNSRNYDSLFNHPQSSIFASG-GADGQIKIWQFGKLHSLQTLTGHS 577

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                  +SP    I  +        +    +        V+ + + +   SP G+   F
Sbjct: 578 GGVLSLAFSPN-QTILASSSEDGTIKLWDFHQGILLTTQTVDSAVISSIAISPDGK---F 633

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLIN 432
                 D   +L+ ID+ G ++  + 
Sbjct: 634 MAGGSDDGKIRLWKIDIQGISQQPLG 659



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 74/237 (31%), Gaps = 35/237 (14%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              + +       +     SPN+    Y          + L +    +  +R     + +
Sbjct: 375 WQCQAIMKGHTAPINAIAISPNR----YILISGSADQSIRLWNLNTGQLVQRFCGHVAAV 430

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISAS--------YSP 311
            A   S NG+R + S   D  +  +  +L +     R  +      S          YSP
Sbjct: 431 NAIAISPNGRRLV-SGSFDRNLLGW--NLNTGTMTDRFFSHSGSPYSHRCGPIHAVAYSP 487

Query: 312 DSSQIVFESDREGKEQLYVMQS-NGSDQKRIS-QDKEASYFDPVWSPQGD---------- 359
           D   I   S   G   + +    NG    R+     E       +SP  +          
Sbjct: 488 DGHIIASCS---GNATIKLWNQRNGELLYRLREHSGEVFCVTFAFSPANNSRNYDSLFNH 544

Query: 360 ---LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
               I  +  +  +  I    K  S + L      + +  +SP+ ++++ S  +DG 
Sbjct: 545 PQSSIFASGGADGQIKIWQFGKLHSLQTLTGHSGGVLSLAFSPN-QTILASSSEDGT 600


>gi|209526188|ref|ZP_03274719.1| YD repeat protein [Arthrospira maxima CS-328]
 gi|209493444|gb|EDZ93768.1| YD repeat protein [Arthrospira maxima CS-328]
          Length = 1152

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 75/197 (38%), Gaps = 28/197 (14%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             F+P    +A    ++  +  +  +          +    ++I A   S +G+    S  
Sbjct: 886  AFTPKADILALGANNEVQLWDIRNIRKSPPELLTILTGHETVIYAIAISPDGQMIA-SAG 944

Query: 278  KDEAMDIYSVD--------LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
             D+ + ++++D          S    +LT          +SPD   ++  S+    + + 
Sbjct: 945  DDKTIKLWTIDGELINSFPAHSERIWQLT----------FSPDGQTLISASE---DKTVK 991

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVE 388
            +  + G      + +++   +    +P+G+LIA          + + + DGS  R +   
Sbjct: 992  LWTTEGGLVN--TLNQDGVIWGVDINPEGNLIASASRDDT---LKLWRLDGSLVRKIRAN 1046

Query: 389  DSNLQAPTWSPSGRSLI 405
               L   T+SP G+++ 
Sbjct: 1047 SGGLTRVTFSPDGQNIA 1063



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 87/223 (39%), Gaps = 24/223 (10%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR-IDRAPKRIGNFRSMILAP 263
             +    + +++    SP+ Q +A  +  D+  ++++ +D   I+  P        +    
Sbjct: 919  TILTGHETVIYAIAISPDGQMIA--SAGDDKTIKLWTIDGELINSFPAHSERIWQLT--- 973

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             FS +G+   IS  +D+ + +++   +      L N   +      +P+ + I   S   
Sbjct: 974  -FSPDGQTL-ISASEDKTVKLWT--TEGGLVNTL-NQDGVIWGVDINPEGNLIASASR-- 1026

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              + L + + +GS  ++I +          +SP G  IA    +G    + +   +G   
Sbjct: 1027 -DDTLKLWRLDGSLVRKI-RANSGGLTRVTFSPDGQNIA---TAGVNNQVKLWNLEGELL 1081

Query: 384  RLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            + L   ++ + +  ++  G  L+      G     L   DL G
Sbjct: 1082 QTLPGHNAMVVSLAFTADGNFLV-----SGGDDRTLIIWDLEG 1119



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 12/136 (8%)

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            SN   RL       +S   S D   I   S+    + + + + +G+     +     + 
Sbjct: 543 NSNEFNRLIGHKGSVLSVDISSDGQLIATASN---DKTVKIWRQDGTLIN--TLQHSGTV 597

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSR 408
               +SP G+L+      G    + +   DG   + +   D+ +    +SP+G+ +    
Sbjct: 598 HRVAFSPDGNLVVSASLDG---QVKLWNVDGELWQNIQAHDAAVWGINFSPNGQIIA--- 651

Query: 409 KKDGDTGSKLYSIDLN 424
              GD   KL+ +D  
Sbjct: 652 SASGDRTVKLWRLDGT 667



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 51/292 (17%), Positives = 111/292 (38%), Gaps = 27/292 (9%)

Query: 131 WDVKDRKQIIGKKFFSSPAS-WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            D+    Q+I           WR+   T+ + +  S T  +  F+     V  + + G +
Sbjct: 560 VDISSDGQLIATASNDKTVKIWRQDG-TLINTLQHSGTVHRVAFSPDGNLVVSASLDGQV 618

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K    + + DG   + +  + D  ++   FSPN Q +A A+ D    ++++ +D      
Sbjct: 619 K----LWNVDGELWQNI-QAHDAAVWGINFSPNGQIIASASGD--RTVKLWRLD---GTL 668

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            + +    + +    F     + + SV  D  + ++S+D        +          ++
Sbjct: 669 LQTLTGHTTSVWNVAFDKT-SQIVASVSIDGLIKLWSID--GRLLNTIEAHQGAVWGVAF 725

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D++ +V  S  +   +++ +        R  Q+K+        S  G+ IA    SG 
Sbjct: 726 CYDTNLLVSVST-DKTAKIWTID---GTLVRTMQEKDVILGV-DCSANGEFIA---TSGT 777

Query: 370 KFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              + + K DG+  + L   ++ ++    S +G     +     D   KL+ 
Sbjct: 778 NNTVTIWKTDGTFIKTLQRHNAVVRGVALSANGLM---AASASDDGTVKLWR 826


>gi|146340678|ref|YP_001205726.1| dipeptidyl anminopeptidase [Bradyrhizobium sp. ORS278]
 gi|146193484|emb|CAL77500.1| Dipeptidyl anminopeptidase [Bradyrhizobium sp. ORS278]
          Length = 652

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 6/118 (5%)

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLV 387
           M S G   +R+  D   ++F+   SP G L+++         + V   D     +     
Sbjct: 1   MMSQGLIPRRVLFDNP-TFFNAKLSPDGRLLSWLAPVDGVLNVWVAPVDRIADGEPVTRT 59

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDPQ-WV 443
               +    WSP GR ++F + ++GD    L+ +++  R    L   P   + P  W 
Sbjct: 60  AGRPIAWQEWSPDGRYVMFLKDENGDENFHLFVVNVGTREVRDLTPYPGVRAIPTLWS 117



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 44/148 (29%), Gaps = 9/148 (6%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTNTLFI 303
              P+R+          + S +G+        D  ++++   +           T    I
Sbjct: 5   GLIPRRVLFDNPTFFNAKLSPDGRLLSWLAPVDGVLNVWVAPVDRIADGEPVTRTAGRPI 64

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQG 358
                +SPD   ++F  D  G     L+V+     + + ++          +WS   P  
Sbjct: 65  AWQ-EWSPDGRYVMFLKDENGDENFHLFVVNVGTREVRDLTPYPGVRAIPTLWSHVTPDR 123

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             +           +  +  D     LL
Sbjct: 124 IAVTLNDRDPASPDVYALHLDSGARTLL 151



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 53/150 (35%), Gaps = 10/150 (6%)

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEAS 348
           Q     R+        +A  SPD   + + +  +G   ++V   +  +D + +++     
Sbjct: 4   QGLIPRRVLFDNPTFFNAKLSPDGRLLSWLAPVDGVLNVWVAPVDRIADGEPVTRTAGRP 63

Query: 349 YFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVE-DSNLQAPT-WS---PSG 401
                WSP G  + F K       F + V+     + R L         PT WS   P  
Sbjct: 64  IAWQEWSPDGRYVMFLKDENGDENFHLFVVNVGTREVRDLTPYPGVRAIPTLWSHVTPD- 122

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             +  +          +Y++ L+    TL+
Sbjct: 123 -RIAVTLNDRDPASPDVYALHLDSGARTLL 151



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 57/152 (37%), Gaps = 22/152 (14%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG------------ANIRYLTPSRD 211
           Q +   +  F++   F ++    G + +   +   DG            A+   +T +  
Sbjct: 4   QGLIPRRVLFDNPTFFNAKLSPDGRLLS--WLAPVDGVLNVWVAPVDRIADGEPVTRTAG 61

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FS---S 267
           + +    +SP+ + V +   ++ D      +     R  + +  +  +   P  +S    
Sbjct: 62  RPIAWQEWSPDGRYVMFLKDENGDENFHLFVVNVGTREVRDLTPYPGVRAIPTLWSHVTP 121

Query: 268 NGKRALISVQKDE--AMDIYSVDLQSNATERL 297
           +  R  +++   +  + D+Y++ L S A   L
Sbjct: 122 D--RIAVTLNDRDPASPDVYALHLDSGARTLL 151


>gi|302560178|ref|ZP_07312520.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302477796|gb|EFL40889.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 1090

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 21/209 (10%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++L          R+   R+ +  PRFS +G+    +  +    +++ V +      RLT
Sbjct: 25  LWLAPLDRPGRAWRLTADRTKLGHPRFSPDGRHIAYTSWRSLDPEVHLVPVDGGPGRRLT 84

Query: 299 NTLFINISAS-YSP---DSSQIVFESDREGKEQ-----LYVMQSNGSDQKRISQDKEASY 349
                +     ++P   D    +      G+        Y +  +GS  +++     +  
Sbjct: 85  YWGSSDTRVCGWAPPDDDGHAEILAVASHGEPFSYFTWAYKLGPDGSPGRKLPWGPVSDI 144

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--------DSNLQAPTWSPSG 401
                + +   +  T     + A     + G+  RL +         D +L +P +   G
Sbjct: 145 QVADVAGERRSLLLTGTPPHEPASWKRYRGGATGRLWLHGHRLLDGLDGHLHSPMFV--G 202

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             + F    +G     LYS   +G     
Sbjct: 203 GRIAFLSDHEG--VGNLYSCAYDGTGLRR 229



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 56/172 (32%), Gaps = 34/172 (19%)

Query: 281 AMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             D++   L       RLT          +SPD   I + S R    +++++  +G   +
Sbjct: 22  EDDLWLAPLDRPGRAWRLTADRTKLGHPRFSPDGRHIAYTSWRSLDPEVHLVPVDGGPGR 81

Query: 340 RISQDKEASYFDPVWSP---QGDL-IAFTKFSGEKFAI----GVMKKDGSQERLLVEDSN 391
           R++    +      W+P    G   I      GE F+       +  DGS  R L     
Sbjct: 82  RLTYWGSSDTRVCGWAPPDDDGHAEILAVASHGEPFSYFTWAYKLGPDGSPGRKLP---- 137

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-W 442
                W P                S +   D+ G   +L+ T     +P  W
Sbjct: 138 -----WGP---------------VSDIQVADVAGERRSLLLTGTPPHEPASW 169



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 81/268 (30%), Gaps = 27/268 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +   D     +   +    L  PRFSP+ + +AY ++   D   V+L+        +
Sbjct: 24  DLWLAPLDRPGRAWRLTADRTKLGHPRFSPDGRHIAYTSWRSLDP-EVHLVPVDGGPGRR 82

Query: 252 RIGNFRSMILAPRFSS---NGKRALISVQKDEAM-----DIYSVDLQSNATERLTNTLFI 303
                 S      ++    +G   +++V             Y +    +   +L      
Sbjct: 83  LTYWGSSDTRVCGWAPPDDDGHAEILAVASHGEPFSYFTWAYKLGPDGSPGRKLPWGPVS 142

Query: 304 NIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK------RISQDKEASYFDPVWSP 356
           +I  A  + +   ++       +   +     G+  +      R+    +     P++  
Sbjct: 143 DIQVADVAGERRSLLLTGTPPHEPASWKRYRGGATGRLWLHGHRLLDGLDGHLHSPMFV- 201

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  IAF         +     DG+  R   +     A   S  G  +++          
Sbjct: 202 -GGRIAFLSDHEGVGNLYSCAYDGTGLRRHTDHDAFYARHASSDGTRVVY------QCAG 254

Query: 417 KLYSID---LNGRNETLINTPAYASDPQ 441
            L+ +D          L  TP  +   +
Sbjct: 255 DLWMVDDLSPGAVPHRLDVTPGGSRSGR 282



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 97/301 (32%), Gaps = 29/301 (9%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMD--RDGANIRYL--TPSRDQILFEPRFSPN 222
             +   F +R      + V       L ++D    GA    L  TP   +    P   P 
Sbjct: 230 HTDHDAFYARHASSDGTRVVYQCAGDLWMVDDLSPGAVPHRLDVTPGGSRSGRRPYQVPA 289

Query: 223 QQKVAYATYDDEDILRVYL------MDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALIS 275
            + +   + D+       +        T  D   + + +   + +  P     G R    
Sbjct: 290 ARHLDGISVDETGRASAVVVRGSLYWLTHRDGPARILTDTPGVRVRLPEMLGAGDRVAYV 349

Query: 276 --VQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDREGKEQLYV 330
              + D+A++I S+   +                      P+  ++   +  +G+  L  
Sbjct: 350 TDAEGDDAVEIASLPRATGQRVPRRLARGRLGRVLEMVADPEGQRLA-VAAHDGRLLLVP 408

Query: 331 MQ--SNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQ 382
               ++G   +   + +       D  +SP G  +A++      S  +  +  ++ D + 
Sbjct: 409 TDEPADGTEGEVTELVRSVNGPVRDLAFSPDGAWLAWSHPGIGRSLRQIKLARIE-DRTV 467

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASD 439
             +       + P ++  GR L F   +  D    +++ DL+   G    L+   +    
Sbjct: 468 LDVTNGRFEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPS 527

Query: 440 P 440
           P
Sbjct: 528 P 528



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 45/147 (30%), Gaps = 8/147 (5%)

Query: 221 PNQQKVAYATYDDED--ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           P  Q++A A +D     +      D       + + +    +    FS +G     S   
Sbjct: 390 PEGQRLAVAAHDGRLLLVPTDEPADGTEGEVTELVRSVNGPVRDLAFSPDGAWLAWSHPG 449

Query: 279 DEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV----MQ 332
                  I    ++      +TN  F + +  ++ D   + F S R       V    + 
Sbjct: 450 IGRSLRQIKLARIEDRTVLDVTNGRFEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLS 509

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGD 359
                +  +     A+      SP+G 
Sbjct: 510 FPLGCRPYLVPLSSATPSPFALSPEGR 536


>gi|145590634|ref|YP_001152636.1| peptidase S9 prolyl oligopeptidase [Pyrobaculum arsenaticum DSM
           13514]
 gi|145282402|gb|ABP49984.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Pyrobaculum arsenaticum DSM 13514]
          Length = 569

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 46/324 (14%), Positives = 102/324 (31%), Gaps = 33/324 (10%)

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
           + G   L   F L DV   +Q+    FF          H +   +   +   +   +  +
Sbjct: 18  RLGAGGLV--FYLSDVTGVQQL---WFFDGSR------HDVYAPVEGRVGDYRVSKDGVV 66

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
               +    G  K  L ++  D      +  S + +     +SP+   +A+ +  D    
Sbjct: 67  AVAVDR--DGDEKWRLYLLGDD-----LMEVSAEGVNSLGAWSPDGSALAFTSTKDSPSD 119

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
               +  R +   +R+     + +   +S  G   +     +  +D      +    + L
Sbjct: 120 FHLYVYRRGEGEVERLAELGGINVVEEWSEAG---IFVTHYETNLDSTIYLFRDGELKEL 176

Query: 298 TNTLF--INISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVW 354
           T      +N S  Y     + +F ++ + +   +  M       K + Q         VW
Sbjct: 177 TKHSGEALNFSPRYV-GGGKALFLTNADWEYVGVAQMDLATGSWKYLVQLDRDVERFDVW 235

Query: 355 SPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
              G+ + F+     +  +  M    G   +L           +   G  ++       +
Sbjct: 236 ---GNYLVFSVNEEGRSGLYQMHIPSGLTYKLPAPAGVATHLEYR-DG--VVLFSLSAVN 289

Query: 414 TGSKLYSIDLNGRNETLINTPAYA 437
            G ++Y    +G    L  +P + 
Sbjct: 290 KGHEVYVYK-DGAVRQLTRSPRFG 312


>gi|319788408|ref|YP_004147883.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Pseudoxanthomonas suwonensis 11-1]
 gi|317466920|gb|ADV28652.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 756

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 49/316 (15%), Positives = 92/316 (29%), Gaps = 88/316 (27%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP------ 263
               L +P+ SP+  +V +    D D  R+ L +  +     R+    S ++ P      
Sbjct: 46  SGPTLMKPQVSPDGARVTFLRGKDSDRNRLDLWEYDVASGQTRLL-VDSSVVLPGGEVLS 104

Query: 264 ---------------------RFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTL 301
                                ++S +GK  L  +     + +Y +  Q +    +LT+  
Sbjct: 105 EVEKARRERQRIAALSGIVDYQWSPDGKALLFPL--GGELYLYDLGRQGSEAVRKLTSGQ 162

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--------------- 346
                A  SP      F  +RE    L+V+      + R++ D                 
Sbjct: 163 GFATDARLSPRGGFASFVRERE----LWVIDLRSGREIRLTHDASETIANGVAEFVADEE 218

Query: 347 -ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA----------- 394
              +    W+P    IAF +       +    +  +   ++V+     A           
Sbjct: 219 MGRHTGYWWAPDDSAIAFIRIDESPVPLRQRHEVHADRTVVVDQRYPAAGDANVRVQLGT 278

Query: 395 --------PTWSPSGR---------------SLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
                   P W   G+                L F R+       +L   DL    + ++
Sbjct: 279 IAPRERAKPRWIDLGKDQDIYLARVDWRDPQRLAFQRQSRDQHLLELVEADLASGRQRVL 338

Query: 432 NTPAYASDPQWVGFMD 447
            T        WV   +
Sbjct: 339 VTETSD---TWVPLHN 351



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 106/339 (31%), Gaps = 60/339 (17%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPR 218
            +  + +T  +G      L       S + +  L V+D R G  IR    + + I     
Sbjct: 152 SEAVRKLTSGQGFATDARLSPRGGFASFVRERELWVIDLRSGREIRLTHDASETIANGVA 211

Query: 219 ---------------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA- 262
                          ++P+   +A+   D+  +      +   DR       + +   A 
Sbjct: 212 EFVADEEMGRHTGYWWAPDDSAIAFIRIDESPVPLRQRHEVHADRTVVVDQRYPAAGDAN 271

Query: 263 ---------------PRFSSNGK---------------RALISVQKDEA--MDIYSVDLQ 290
                          PR+   GK               R     Q  +   +++   DL 
Sbjct: 272 VRVQLGTIAPRERAKPRWIDLGKDQDIYLARVDWRDPQRLAFQRQSRDQHLLELVEADLA 331

Query: 291 SNATERLTNTLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           S     L                + PD  + ++ S+R G + LY+   +GS    ++  +
Sbjct: 332 SGRQRVLVTETSDTWVPLHNALRFLPDG-RFLWSSERSGFQHLYIASEDGSQLTALTSGE 390

Query: 346 EASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                            F  T  S  +  +  +   G +   L ++  + AP ++ +  S
Sbjct: 391 WVVDDLVAVDAGAGYAWFTGTHESPLEKHVYRVPLAGGEVEKLSQEPGMHAPAFARN-AS 449

Query: 404 LIFSRKKDGDTGSKLYSIDLNG-RNETLI-NTPAYASDP 440
           +      +  T  ++     +G R  TL+ N PA  + P
Sbjct: 450 VYVDHWSNESTPPQIDLFRNDGVRLATLLRNDPADPAHP 488


>gi|294675370|ref|YP_003575986.1| hypothetical protein PRU_2741 [Prevotella ruminicola 23]
 gi|294472569|gb|ADE81958.1| hypothetical protein PRU_2741 [Prevotella ruminicola 23]
          Length = 494

 Score = 63.1 bits (152), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 77/261 (29%), Gaps = 64/261 (24%)

Query: 201 ANIRYLTPSRDQ---ILFEPRFSPNQQKVAYATYDDEDILRV---------------YLM 242
            N ++L    D          + P+ +  AYA         V                L+
Sbjct: 210 GNQQWLNTRTDSTKAAGSYAYWHPSGRYCAYAVNSVHQNFHVGTEKRIEAYHRFSDLILL 269

Query: 243 DTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE----RL 297
           DT+ ++     +       + P FS +GK    S  K       ++  +    +    R+
Sbjct: 270 DTQTNQLILSPLLQTEDQEIFPAFSPDGKYLYYSTSKP-----CNLPAEYEKVKCSICRI 324

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                         D     F     G E   ++          +     SY     S  
Sbjct: 325 AF------------DGKTGTF-----GNEVDTLVN---------TAATGKSYTLVRPSYD 358

Query: 358 GDLIAFTKFSGEKF-------AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFS 407
           G  + F       F        + +M     + R L E ++ +  +   WS +    +FS
Sbjct: 359 GRWLMFCVSDHSNFPVFQNDADLWLMDLKTGEMRELKEVNSRKTESFHNWSSNSGWFVFS 418

Query: 408 RKKDGDTGSKLYSIDLNGRNE 428
            K++    ++LY   ++ +  
Sbjct: 419 SKRENGEYAQLYLASIDDKGR 439



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 56/154 (36%), Gaps = 27/154 (17%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVY-----------------LMDTRIDRAPKRIGNFRS 258
            P FSP+ + + Y+T    ++   Y                      +D         +S
Sbjct: 290 FPAFSPDGKYLYYSTSKPCNLPAEYEKVKCSICRIAFDGKTGTFGNEVDTLVNTAATGKS 349

Query: 259 MILAPRFSSNGKRALISVQKDEAM-------DIYSVDLQSNATERL--TNTLFINISASY 309
             L  R S +G+  +  V             D++ +DL++     L   N+       ++
Sbjct: 350 YTL-VRPSYDGRWLMFCVSDHSNFPVFQNDADLWLMDLKTGEMRELKEVNSRKTESFHNW 408

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           S +S   VF S RE  E   +  ++  D+ R+++
Sbjct: 409 SSNSGWFVFSSKRENGEYAQLYLASIDDKGRVTK 442



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 50/146 (34%), Gaps = 42/146 (28%)

Query: 342 SQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIG-------------VMKKDGSQERL-- 385
           +   +A+     W P G   A+      + F +G             ++  D    +L  
Sbjct: 219 TDSTKAAGSYAYWHPSGRYCAYAVNSVHQNFHVGTEKRIEAYHRFSDLILLDTQTNQLIL 278

Query: 386 ---LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-------LYSIDLNGRN-------E 428
              L  +     P +SP G+ L +S  K  +  ++       +  I  +G+        +
Sbjct: 279 SPLLQTEDQEIFPAFSPDGKYLYYSTSKPCNLPAEYEKVKCSICRIAFDGKTGTFGNEVD 338

Query: 429 TLINTPAYAS---------DPQWVGF 445
           TL+NT A            D +W+ F
Sbjct: 339 TLVNTAATGKSYTLVRPSYDGRWLMF 364


>gi|322800302|gb|EFZ21306.1| hypothetical protein SINV_00203 [Solenopsis invicta]
          Length = 333

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 90/244 (36%), Gaps = 19/244 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S S  +   KN++   +     ++Y      + +   +FSPN + +A +  D      + 
Sbjct: 17  SSSTPASGTKNTIVKSNYT---LKYTLAGHTKAISSVKFSPNGEWLASSAADK----LIK 69

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +  +   +  K I   +  I    +SS+  R L+S   D+ + I+ +       + L   
Sbjct: 70  IWGSYDGKFEKTIAGHKLGISDVAWSSD-SRLLVSASDDKTLKIWELS-SGKCLKTLKGH 127

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                  +++P S+ IV  S     E + +         +             ++  G L
Sbjct: 128 SNYVFCCNFNPQSNLIVSGSF---DESVRIWDVRSGKCLKTLPAHSDPVSAVHFNRDGSL 184

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           I  + + G    I      G   + L++D N  +    +SP+G+ ++ +     D   KL
Sbjct: 185 IVSSSYDG-LCRIW-DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKL 239

Query: 419 YSID 422
           +   
Sbjct: 240 WDYS 243


>gi|311893592|dbj|BAJ26000.1| hypothetical protein KSE_01490 [Kitasatospora setae KM-6054]
          Length = 1975

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 10/172 (5%)

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            V L D        R+      +        G R + +   +  + ++          RL 
Sbjct: 1329 VRLWDQVSGECRHRLDVHPGGVWPVSLGPGG-RLVATGDPNGTVTLWDT-ATGRPLHRLR 1386

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   +A +SPD + IV   D  G  +L+   +    ++ +      + +   +SP G
Sbjct: 1387 GHDAPVYTAVFSPDGTLIV-TGDSGGGARLW--STATGRRRAVLPGHLGTVYRTAFSPDG 1443

Query: 359  DLIAFT---KFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
             L+A        G    + +    G +    L      +    + P G  L 
Sbjct: 1444 TLVATADGGDDHGTGGTVRIWDTTGRRPLHTLTGHAGRIYTLAFHPDGDLLA 1495



 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 69/211 (32%), Gaps = 13/211 (6%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ + +A  + D      V + D     A + + +    + A +F+      L +  
Sbjct: 1272 AFSPDGRLLAVGSEDG----SVLVCDALTGTALRTLKDHIGRVYAVKFA---GEVLATGS 1324

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D  + ++   +      RL          S  P   ++V   D  G   L+   +    
Sbjct: 1325 ADGTVRLWD-QVSGECRHRLDVHPGGVWPVSLGP-GGRLVATGDPNGTVTLW--DTATGR 1380

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 +  +A  +  V+SP G LI  T  SG    +        +  L      +    +
Sbjct: 1381 PLHRLRGHDAPVYTAVFSPDGTLIV-TGDSGGGARLWSTATGRRRAVLPGHLGTVYRTAF 1439

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSI-DLNGRN 427
            SP G  +  +   D         I D  GR 
Sbjct: 1440 SPDGTLVATADGGDDHGTGGTVRIWDTTGRR 1470



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 89/267 (33%), Gaps = 19/267 (7%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI-TGEKGDFNSRILFVSESVVSG 187
            R++ VK   +++      S     ++   +S +    +     G +   +      V +G
Sbjct: 1309 RVYAVKFAGEVLA---TGSADGTVRLWDQVSGECRHRLDVHPGGVWPVSLGPGGRLVATG 1365

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                ++ + D       +     D  ++   FSP+   +   T D     R  L  T   
Sbjct: 1366 DPNGTVTLWDTATGRPLHRLRGHDAPVYTAVFSPDGTLI--VTGDSGGGAR--LWSTATG 1421

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER----LTNTLFI 303
            R    +      +    FS +G     +   D+     +V +      R    LT     
Sbjct: 1422 RRRAVLPGHLGTVYRTAFSPDGTLVATADGGDDHGTGGTVRIWDTTGRRPLHTLTGHAGR 1481

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              + ++ PD   +    D EG+ +L+    +G+  +R   D     +   +   G  +A 
Sbjct: 1482 IYTLAFHPDGDLLA-SGDTEGQVRLWN-PLDGTALERP-DDSTGKIYQVAFDEAGTRLAA 1538

Query: 364  TKFSGEK--FAIGVMKKD--GSQERLL 386
            +   G    + +     D  G + R++
Sbjct: 1539 SDSDGGVRIWRVTRHSPDQRGGRHRVV 1565



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 71/405 (17%), Positives = 128/405 (31%), Gaps = 63/405 (15%)

Query: 74   QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLG-AQ---VLVTGRVIKEGKDRLRVEFR 129
            QR     ++       +        RF+     G A+   +LVTG     G D L    R
Sbjct: 1557 QRGGRHRVVPLRRQPPEHRGSVWACRFRPGAGRGGAETDALLVTG-----GNDGLV---R 1608

Query: 130  LWDVKDRK----------QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
            LWD    +          +I    F           +     +++  TG +    +    
Sbjct: 1609 LWDPASGRSRQLLRGHGRRIGSLSFSGDGTLLAAGGNDGVVRLWEPATGRRVRELTGRSS 1668

Query: 180  VSESVVSGIIKNSLCVMDRDG----ANIRYLTPSRDQIL-----FEPRFSPNQQKVAYAT 230
               S         L     DG     N R     R+  +     +   FS +   VA A 
Sbjct: 1669 RLVSAEFSPEDAVLATATNDGDLCLWNARTGEYLREMDVETEHVWAEGFSADGALVATAN 1728

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             DD     V +   R       +   R  + +  F+ +G+R    +   +   +   DL 
Sbjct: 1729 DDD----TVRIWYRRTGAHLTTLREHRGRVRSIAFTPDGRRL---LTGCDDHKVRISDLD 1781

Query: 291  SNATER----LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            +   E      T+ ++   + + +PD   +   S  +G   ++    +G+ + R++    
Sbjct: 1782 TGRVEAELVGHTDRVYAVTAVTGTPDGDWLASAS-WDGTALVWR---DGAVRHRLT-GHV 1836

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSL 404
               +     P   L+A    +G+   + +           L      + A T++P G  L
Sbjct: 1837 GRLWTAAAHPARPLLA---TAGDDRVVRLWDTRTGAPLAGLRGHTGRILAVTFNPDGTLL 1893

Query: 405  IFSRKKDGDTGSKLYSIDLNGRN---ETLINTPAYASDPQWVGFM 446
                    D   +L+ I   GR     TL+  PA      W   +
Sbjct: 1894 A---SGGEDGTVRLWRIGPEGRPAPLATLLGAPAG-----WAALL 1930


>gi|324111586|gb|EGC05567.1| hypothetical protein ERIG_03882 [Escherichia fergusonii B253]
          Length = 416

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 54/160 (33%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G   ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGGPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP GR L +        G +L+  + +
Sbjct: 382 NHVNPPSADAVVFSPDGRWLAWME------GGQLWITETD 415



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGGPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHVNPPSADAVVFSPDGRWLAW---MEGG-QLWITETD 415



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGGPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHVNPPSAD-AVVFSPDGRWLAW 403


>gi|218288382|ref|ZP_03492672.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218241355|gb|EED08529.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 600

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 50/134 (37%), Gaps = 4/134 (2%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--V 317
           I     + +  R  ++       D + +DL      RLTN   +  +  + P    +   
Sbjct: 18  IFGLTVAKDESRIAVATNFAGRYDAWGIDLDCPFPYRLTNEGQVPHAMHFDPQGRYVLVA 77

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI--GV 375
           F+ D +   QLY++   G  ++ +   +   +     S  G+ I ++        +   V
Sbjct: 78  FDRDGDENAQLYLVPPRGGAKQLLRTHEGRRFMFCTTSTDGNRIYYSSDKDNPRFLCGYV 137

Query: 376 MKKDGSQERLLVED 389
              +  +ER+L E 
Sbjct: 138 FDLESGEERILYEG 151



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 88/246 (35%), Gaps = 27/246 (10%)

Query: 203 IRYLTPSRDQILFEPRF-----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           I+   P+ +Q+   P       + ++ ++A AT         + +D      P R+ N  
Sbjct: 2   IQLPRPNPEQLFHTPTIFGLTVAKDESRIAVATNFAGR-YDAWGIDLDC-PFPYRLTNEG 59

Query: 258 SMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSS 314
            +  A  F   G+  L++  +D      +Y V  +  A + L        +  + S D +
Sbjct: 60  QVPHAMHFDPQGRYVLVAFDRDGDENAQLYLVPPRGGAKQLLRTHEGRRFMFCTTSTDGN 119

Query: 315 QIVFESDREGKEQL---YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +I + SD++   +    YV      +++ + + +         S               +
Sbjct: 120 RIYYSSDKD-NPRFLCGYVFDLESGEERILYEGEGGPTVLMAVSDDESTWVTATAFANTY 178

Query: 372 AIGVMKKDGSQERLLVEDSN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN--- 424
            I  + + G++   L  D +    + +  ++  G  +IF+         +LY    +   
Sbjct: 179 HIAHLHR-GAERVSLTPDPSTPHIVDSVEFA--GNRVIFATDY---LADELYLASFDPQT 232

Query: 425 GRNETL 430
           G  + +
Sbjct: 233 GSFQRI 238



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 6/143 (4%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             E+L +T  I    + + D S+I   ++  G+   + +  +     R++ + +  +   
Sbjct: 8   NPEQLFHTPTI-FGLTVAKDESRIAVATNFAGRYDAWGIDLDCPFPYRLTNEGQVPHAM- 65

Query: 353 VWSPQGDLI--AFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSR 408
            + PQG  +  AF +   E   + ++   G  ++LL   E       T S  G  + +S 
Sbjct: 66  HFDPQGRYVLVAFDRDGDENAQLYLVPPRGGAKQLLRTHEGRRFMFCTTSTDGNRIYYSS 125

Query: 409 KKDGDTGSKLYSIDLNGRNETLI 431
            KD       Y  DL    E ++
Sbjct: 126 DKDNPRFLCGYVFDLESGEERIL 148



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 30/78 (38%), Gaps = 1/78 (1%)

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTG 415
               IA       ++    +  D      L  +  +     + P GR ++ +  +DGD  
Sbjct: 26  DESRIAVATNFAGRYDAWGIDLDCPFPYRLTNEGQVPHAMHFDPQGRYVLVAFDRDGDEN 85

Query: 416 SKLYSIDLNGRNETLINT 433
           ++LY +   G  + L+ T
Sbjct: 86  AQLYLVPPRGGAKQLLRT 103


>gi|298244658|ref|ZP_06968464.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297552139|gb|EFH86004.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 706

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 24/204 (11%)

Query: 219 FSPNQQKVAYAT------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN-GKR 271
           +SP    +A+        +      +VY  +T      +     + ++ A   +   G +
Sbjct: 485 WSPGGDFLAFVASNGLEIWGVRQKKQVYTNNTVKFPQGRLAYMLQWVLGAASLAPGRGAQ 544

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             I    D+ +   S      A   LT  +    + ++SPD + +   S +    Q++ +
Sbjct: 545 KAIVSGVDD-IWSSSAGANGKAQALLTGIVGDAQALAWSPDGTMLA-VSYQNADVQVWDV 602

Query: 332 QSNGSDQKRISQDKEASYFDP---VWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQER-LL 386
                 ++R+      +   P    WSP G  +   + +  +   + V +  G  +R  L
Sbjct: 603 -----ARQRVVFTCAPALKGPQVLAWSPDGRYLLGARDYENKDTNLYVWQMQGGAQRGKL 657

Query: 387 V-----EDSNLQAPTWSPSGRSLI 405
           V         + + +WSP  R L+
Sbjct: 658 VKVYRGHTQPICSASWSPDSRMLL 681



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/269 (16%), Positives = 88/269 (32%), Gaps = 36/269 (13%)

Query: 198 RDGANIRYLTPSRDQ----ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           + GAN ++L P        +L     +P+ ++ A AT        V L     D      
Sbjct: 421 QTGANEQWLYPGASHYGTTLLKNICLAPDGRQYALATDRG-----VLLGHLNADTYETLA 475

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTNTL------FINI 305
               + +L   +S  G            +        + +N T +           ++  
Sbjct: 476 T--PNYLLDMCWSPGGDFLAFVASNGLEIWGVRQKKQVYTNNTVKFPQGRLAYMLQWVLG 533

Query: 306 SASYSPD-SSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +AS +P   +Q    S   G + ++   +      + +            WSP G ++A 
Sbjct: 534 AASLAPGRGAQKAIVS---GVDDIWSSSAGANGKAQALLTGIVGDAQALAWSPDGTMLAV 590

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDG-DTGSKLY 419
           +  + +     V +    Q  +      L+ P    WSP GR L+ +R  +  DT   ++
Sbjct: 591 SYQNADVQVWDVAR----QRVVFTCAPALKGPQVLAWSPDGRYLLGARDYENKDTNLYVW 646

Query: 420 SIDLNGRNETLINTPAYASDP----QWVG 444
            +    +   L+      + P     W  
Sbjct: 647 QMQGGAQRGKLVKVYRGHTQPICSASWSP 675



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 44/133 (33%), Gaps = 13/133 (9%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +A   +        A  +S +G    +S Q     D+   D+        T    +   
Sbjct: 563 GKAQALLTGIVGDAQALAWSPDGTMLAVSYQ---NADVQVWDVA-RQRVVFTCAPALK-G 617

Query: 307 A---SYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQG 358
               ++SPD   ++   D E K+  LYV Q  G  Q+     + +          WSP  
Sbjct: 618 PQVLAWSPDGRYLLGARDYENKDTNLYVWQMQGGAQRGKLVKVYRGHTQPICSASWSPDS 677

Query: 359 DLIAFTKFSGEKF 371
            ++       E F
Sbjct: 678 RMLLSGSGLDEGF 690


>gi|78061419|ref|YP_371327.1| putative secreted protein [Burkholderia sp. 383]
 gi|77969304|gb|ABB10683.1| putative secreted protein [Burkholderia sp. 383]
          Length = 470

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 84/267 (31%), Gaps = 23/267 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYD 232
           +  L     V  G   + L + D     +  L+ S   I       FSP+ + +A+    
Sbjct: 44  TGKLVYHSYVKYGDGTSQLFLYDFSAHTLTQLSKSTWGITDPMNGVFSPDGKWLAFMGIS 103

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +     V+++       P  + N         P+FS++GK  +     D      S    
Sbjct: 104 NG-AWNVFMLQLGAGTPPVNLTNSTGATRNEDPKFSADGKTLVFKQNGDVKQATLSYTSA 162

Query: 291 S---NATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                +   LTN            +PD+S + + S       L                 
Sbjct: 163 GPVFTSVVSLTNAPAGAEYSMPFLAPDASAVYYASGTGANMGLMKRTLATGATAVFDNPA 222

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF--AIG--VMKKDGSQERLLVED--SNLQAPTWSP 399
               + P+    G  + + ++        I         +  +L + D  SN   P  +P
Sbjct: 223 GLQTYYPIVRADGT-VFYARWKDTSQLDQIYSKTADPASTPNQLALNDCISNNSDP--AP 279

Query: 400 -SGR-SLIFSRKKDGDTGSKLYSIDLN 424
            SG   L FS    G  G +LY  D+ 
Sbjct: 280 VSGTNYLFFSSTTAG--GYQLYVGDVT 304



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 11/137 (8%)

Query: 314 SQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSG 368
            ++V+ S     +G  QL++   +     ++S+         + V+SP G  +AF   S 
Sbjct: 45  GKLVYHSYVKYGDGTSQLFLYDFSAHTLTQLSKSTWGITDPMNGVFSPDGKWLAFMGISN 104

Query: 369 EKFAIGVMKKD-GSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             + + +++   G+    L      +  + P +S  G++L+F  K++GD      S    
Sbjct: 105 GAWNVFMLQLGAGTPPVNLTNSTGATRNEDPKFSADGKTLVF--KQNGDVKQATLSYTSA 162

Query: 425 GRNETLINTPAYASDPQ 441
           G   T + +   A    
Sbjct: 163 GPVFTSVVSLTNAPAGA 179


>gi|325499496|gb|EGC97355.1| hypothetical protein ECD227_3593 [Escherichia fergusonii ECD227]
          Length = 416

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 54/160 (33%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G   ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGGPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP GR L +        G +L+  + +
Sbjct: 382 NLANPPSADAVVFSPDGRWLAWME------GGQLWITETD 415



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGGPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT  L    SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENLANPPSADAVVFSPDGRWLAW---MEGG-QLWITETD 415



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGGPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   + + N  S   A  FS +G+    
Sbjct: 375 EVEYLTENLANPPSAD-AVVFSPDGRWLAW 403


>gi|321456764|gb|EFX67864.1| hypothetical protein DAPPUDRAFT_330675 [Daphnia pulex]
          Length = 335

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 82/224 (36%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      V +      +  K I   +  I
Sbjct: 36  YALKFTLAGHTKAVSAVKFSPNGEWLASSSADK----LVKIWGAYDGKFEKSITGHKLGI 91

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + I+ +       + L          +++P S+ IV  S
Sbjct: 92  SDVAWSSD-SRLLVSASDDKTLKIWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 149

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 150 F---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 204

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 205 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 245


>gi|220910634|ref|YP_002485944.1| WD-40 repeat protein [Cyanothece sp. PCC 7425]
 gi|219867406|gb|ACL47743.1| WD-40 repeat protein [Cyanothece sp. PCC 7425]
          Length = 1213

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 82/231 (35%), Gaps = 19/231 (8%)

Query: 176 RILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            I F S+S   VS    + L + D                ++    SP+ Q V       
Sbjct: 712 SIAFTSDSRYLVSACEDHQLRLWDLTQGECIRTFEGHSHTVWTVDISPDDQYVI----SG 767

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            +   V L D +  R  +        I +  FS +G+    S   D+ + ++  +++   
Sbjct: 768 GNDYVVKLWDLQSGRCLQDYEGHTLQIWSVAFSPDGQTIA-SGSMDQTVRLW--NIEERQ 824

Query: 294 TERLTNTLFINISA-SYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFD 351
            +         + A ++S D   +       G ++ +     +     +     +   + 
Sbjct: 825 CKACFRGHSSMVMAVAFSADGKTLA----SGGMDRLIKHWDLSSKACAKTWSGFKNIIWS 880

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSG 401
             +SP+G+ IA +   G    + + + D SQ  + +   + + A  +SP G
Sbjct: 881 VAFSPEGETIASSSLDG---ILRIWQVDNSQCIQTMKHPAEVHAIAFSPGG 928



 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 76/217 (35%), Gaps = 16/217 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           S+ +        +    + +  +F    SP+ + +   + D      V L + R  +   
Sbjct: 604 SIHLWFYAREQRQTTVKAHENFIFTLAISPDSRLLVSGSIDG----MVKLWEVRTGQCLY 659

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYS 310
            +     ++ +  FS +GK    S  +D  + I+  D ++    + L        S +++
Sbjct: 660 TLNAHAKIVWSVVFSKDGKWFA-SSCEDGTIKIW--DCKTGECLQTLRANQSSVRSIAFT 716

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            DS  +V  +  +   QL +      +  R  +    + +    SP    +      G  
Sbjct: 717 SDSRYLV-SACEDH--QLRLWDLTQGECIRTFEGHSHTVWTVDISPDDQYVI---SGGND 770

Query: 371 FAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
           + + +      +     E     + +  +SP G+++ 
Sbjct: 771 YVVKLWDLQSGRCLQDYEGHTLQIWSVAFSPDGQTIA 807



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 86/245 (35%), Gaps = 36/245 (14%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              K++L + +    +     P+    +    F+ +   +A       D   V + + R  
Sbjct: 952  HTKSTLKLWEVQTGSCLMTIPAHIGKVNSVCFNHDGSLIA----SGGDDKNVQIFNLRHQ 1007

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY---------SVDLQSNATERLT 298
            R  K +   ++++ +  FS NG+    S   D+ + I+          +   +NA   + 
Sbjct: 1008 RVEKLLQGHKAVVWSVAFSPNGRLLA-SGSFDQTVRIWDVRSWQCLHILSGHTNALTTIV 1066

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                +   A+ S D+              + +             D         +SP G
Sbjct: 1067 FHPSLPCIATASSDA-------------MVKLWSLETGQCYHTLSDHHNVVMGIAFSPDG 1113

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGS- 416
                   +      + V   +  Q + + + +S + +  +SP+G++L+      GD G+ 
Sbjct: 1114 QTFTTGSYDKT---VRVWDVESWQCQTIFQANSLVHSVAFSPNGQTLV----SGGDNGTL 1166

Query: 417  KLYSI 421
            +L+ +
Sbjct: 1167 QLWDL 1171



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 67/198 (33%), Gaps = 15/198 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ + +     +  L      +++   FSPN + +A  ++D      V + D R
Sbjct: 992  SGGDDKNVQIFNLRHQRVEKLLQGHKAVVWSVAFSPNGRLLASGSFDQ----TVRIWDVR 1047

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
              +    +    + +    F  +      +   D  + ++S  L++      L++   + 
Sbjct: 1048 SWQCLHILSGHTNALTTIVFHPSLPCIA-TASSDAMVKLWS--LETGQCYHTLSDHHNVV 1104

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +  ++SPD       S     + + V        + I     +      +SP G  +   
Sbjct: 1105 MGIAFSPDGQTFTTGSY---DKTVRVWDVESWQCQTI-FQANSLVHSVAFSPNGQTLV-- 1158

Query: 365  KFSGEKFAIGVMKKDGSQ 382
               G+   + +      Q
Sbjct: 1159 -SGGDNGTLQLWDLKTRQ 1175



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 64/240 (26%), Gaps = 61/240 (25%)

Query: 252 RIGNFRSMILAPRFSSNG-----------------------------------------K 270
           R       I+A  FS +G                                          
Sbjct: 576 RFSQTFGWIVAIAFSPDGEYWAACDSAGSIHLWFYAREQRQTTVKAHENFIFTLAISPDS 635

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R L+S   D  + ++ V         L     I  S  +S D       S  +G   + +
Sbjct: 636 RLLVSGSIDGMVKLWEV-RTGQCLYTLNAHAKIVWSVVFSKDGKWFA-SSCEDGT--IKI 691

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                 +  +  +  ++S     ++     +     + E   + +      +     E  
Sbjct: 692 WDCKTGECLQTLRANQSSVRSIAFTSDSRYLV---SACEDHQLRLWDLTQGECIRTFEGH 748

Query: 391 NLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI-------DLNGRNETLINTPAYASDPQ 441
           +    T   SP  + +I       D   KL+ +       D  G    + +  A++ D Q
Sbjct: 749 SHTVWTVDISPDDQYVI---SGGNDYVVKLWDLQSGRCLQDYEGHTLQIWSV-AFSPDGQ 804


>gi|159465351|ref|XP_001690886.1| notchless-like protein [Chlamydomonas reinhardtii]
 gi|158279572|gb|EDP05332.1| notchless-like protein [Chlamydomonas reinhardtii]
          Length = 290

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 80/208 (38%), Gaps = 15/208 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A A++D    L          +    +      +L+ +FS +G   L+S  
Sbjct: 59  AFSPDGKTLASASHDKMIFLWDLESCRESGQPVAELTGHMDKVLSTQFSPDGA-LLVSAS 117

Query: 278 KDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLY--VMQSN 334
            D ++ ++  D+ S      L       ++AS+S D + +   +  +   +L+   +   
Sbjct: 118 GDGSLRLW--DVASRKVHGVLLGHASGVVAASFSRDGALVA-SAASDNTVRLWDPKIACE 174

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-- 392
           G   +  S           +SP G  +A    +G+ + + +        R L++      
Sbjct: 175 GKSVEEASLSHMDCVTCVAFSPSGHTVA---SAGQDWTVRLWDPTDGNHRALLQGHTDVV 231

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +   +SP+G  L  +     D   +L+ 
Sbjct: 232 RCVAFSPTGHLLASASS---DWTVRLWD 256



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 50/165 (30%), Gaps = 21/165 (12%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE------RLTNTLFINIS 306
           +      +L+  FS NG     S   D  + ++  D  +   +       L    F   S
Sbjct: 1   LFGHTGQVLSVAFSPNGALLA-SASVDSTVRLW--DAATGEEKGELFGHALVAHKFAVTS 57

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQS----NGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            ++SPD   +   S     + +++                           +SP G L+ 
Sbjct: 58  VAFSPDGKTLASASH---DKMIFLWDLESCRESGQPVAELTGHMDKVLSTQFSPDGALLV 114

Query: 363 FTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
                G    + +      +    LL   S + A ++S  G  + 
Sbjct: 115 SASGDGS---LRLWDVASRKVHGVLLGHASGVVAASFSRDGALVA 156



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 62/212 (29%), Gaps = 49/212 (23%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQ---IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           V   G   L    RLWDV  RK    ++G       AS+ +    ++             
Sbjct: 114 VSASGDGSL----RLWDVASRKVHGVLLGHASGVVAASFSRDGALVA------------- 156

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDR----DGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                        S    N++ + D     +G ++   + S    +    FSP+   VA 
Sbjct: 157 -------------SAASDNTVRLWDPKIACEGKSVEEASLSHMDCVTCVAFSPSGHTVA- 202

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                     V L D         +     ++    FS  G     S   D  + ++   
Sbjct: 203 ---SAGQDWTVRLWDPTDGNHRALLQGHTDVVRCVAFSPTGHLLA-SASSDWTVRLW--- 255

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFES 320
                   L        S ++SP+S  +   S
Sbjct: 256 ----DPHTLRGHAAPVHSLAFSPNSRSLASGS 283


>gi|150026398|ref|YP_001297224.1| prolyl oligopeptidase family protein [Flavobacterium psychrophilum
           JIP02/86]
 gi|149772939|emb|CAL44423.1| Prolyl oligopeptidase family protein [Flavobacterium psychrophilum
           JIP02/86]
          Length = 633

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 54/135 (40%), Gaps = 12/135 (8%)

Query: 219 FSPNQQKVAYA-------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +SP+ + + Y         Y       +Y  +    +   R  +       P FSS G  
Sbjct: 177 WSPDSKSILYVCKKEAGTKYAISTNTNIYQYNLETQKTINRTEDNLGYDTNPAFSSEGNL 236

Query: 272 ALISVQKDEA---MDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQ 327
           A + +++D      +   VD +      LT     ++S+ S+S D  ++ F +  +G +Q
Sbjct: 237 AYLQMKRDGYEADKNDIIVDFKGIKI-NLTANWDNSVSSFSWSKDGKKVYFIAATDGTQQ 295

Query: 328 LYVMQSNGSDQKRIS 342
           L+ +   G  +  I+
Sbjct: 296 LFEVNFPGLTRIAIT 310



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 101/286 (35%), Gaps = 25/286 (8%)

Query: 165 SITGEKGDFNSRILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            IT      +S+ +  S S  S       +    +   G     +  ++  +L +   +P
Sbjct: 32  RITALGISKDSKNVIYSVSTPSIAEDKSNSKFYTIPVIGGKATEVKDTKS-LLLDKNIAP 90

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK--RALISVQKD 279
           N + + Y+     D +        ++++  +I N         ++  GK         KD
Sbjct: 91  NGKYLVYSEEVKIDKVHGKDYYPELEKSNVQIYNGLDYRHWDTWN-EGKFNHVFYKENKD 149

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--------SDREGKEQLYVM 331
           +++ I  +  +   + +       +    +SPDS  I++                 +Y  
Sbjct: 150 KSVGIDILKGEGFDSPQKPFGGDEDY--IWSPDSKSILYVCKKEAGTKYAISTNTNIYQY 207

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG----VMKKDGSQERLLV 387
                     ++D      +P +S +G+ +A+ +   + +       ++   G +  L  
Sbjct: 208 NLETQKTINRTEDNLGYDTNPAFSSEGN-LAYLQMKRDGYEADKNDIIVDFKGIKINLTA 266

Query: 388 E-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             D+++ + +WS  G+ + F    DG    +L+ ++  G     I 
Sbjct: 267 NWDNSVSSFSWSKDGKKVYFIAATDGTQ--QLFEVNFPGLTRIAIT 310



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 84/244 (34%), Gaps = 30/244 (12%)

Query: 174 NSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF--EPRFSPNQQKVAYA 229
           +  IL+V   E+     I  +  +   +    + +  + D + +   P FS     +AY 
Sbjct: 181 SKSILYVCKKEAGTKYAISTNTNIYQYNLETQKTINRTEDNLGYDTNPAFSSEGN-LAYL 239

Query: 230 TYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                D       D  +D    +I    N+ + + +  +S +GK+       D    ++ 
Sbjct: 240 QM-KRDGYEADKNDIIVDFKGIKINLTANWDNSVSSFSWSKDGKKVYFIAATDGTQQLFE 298

Query: 287 VDLQS-----NATERLTNTLF-----INISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           V+            +LT   F     ++I+A+     + IV  +D     ++Y       
Sbjct: 299 VNFPGLTRIAITVTQLTFGDFDVHDIVDITAN-----NAIVTRTDMNHALEIYSYNLKKK 353

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM-----KKDGSQERLLVEDSN 391
              +I++    +Y      P+ +    T   G+K  + V+             LL     
Sbjct: 354 TWLQITKVNNDAYAKLAL-PKYERRYVTTTDGKKMLVWVILPPNFDATKKYPTLLFCQGG 412

Query: 392 LQAP 395
            Q+P
Sbjct: 413 PQSP 416


>gi|145239917|ref|XP_001392605.1| F-box and wd40 domain protein [Aspergillus niger CBS 513.88]
 gi|134077119|emb|CAK45460.1| unnamed protein product [Aspergillus niger]
          Length = 486

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 49/248 (19%), Positives = 84/248 (33%), Gaps = 24/248 (9%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            +D D    R L P    ++    +  +++ +       +  LR  L     +      G
Sbjct: 158 PVDIDTLTSRTLQPLMSDLVSNHGWKSDEKAMGALDQAMKKALRKALHLHEQESKHYLRG 217

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMD----------IYSVDLQSNATE-RLTNTLFI 303
              S   +P FSS+GK  +   Q +              +   D+Q+ +   RL      
Sbjct: 218 ELASF-GSPTFSSDGKTLIYLSQNETTQHGPRDPALLPCLNLWDMQTRSLRHRLLGHTDA 276

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            + A  SPD+S +          +  V  +N      +    +   +   +SP    +A 
Sbjct: 277 IMWAGMSPDNSLVA---SIAWDGRARVWDANSGACIHVLVSVDGQLWSGAFSPDSKYLAV 333

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGS-KLYS 420
           ++ S   + I V      Q     +     A T  WSP G  L       GD G+ +L+ 
Sbjct: 334 SQGSPRTY-IHVYDLRTGQSVSRFDGFRRWARTLAWSPDGTVLA----GGGDGGTVRLWD 388

Query: 421 IDLNGRNE 428
             LNG   
Sbjct: 389 -PLNGEER 395



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 99/299 (33%), Gaps = 40/299 (13%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSR--------ILFVSESVVSGIIKNS------LC 194
            + RK  H    +    + GE   F S         ++++S++  +            L 
Sbjct: 198 KALRKALHLHEQESKHYLRGELASFGSPTFSSDGKTLIYLSQNETTQHGPRDPALLPCLN 257

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D    ++R+        +     SP+   VA   +D     R  + D         + 
Sbjct: 258 LWDMQTRSLRHRLLGHTDAIMWAGMSPDNSLVASIAWDG----RARVWDANSGACIHVLV 313

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDS 313
           +    + +  FS + K   +S Q      I+  DL++     R         + ++SPD 
Sbjct: 314 SVDGQLWSGAFSPDSKYLAVS-QGSPRTYIHVYDLRTGQSVSRFDGFRRWARTLAWSPDG 372

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQK---RISQD-----KEASYFDPVWSPQGDLIAFTK 365
           + +       G  +L+       +++   R++ +       A      +  +G  + F  
Sbjct: 373 TVLA-GGGDGGTVRLW--DPLNGEERMRWRLAFEDSLMRSFAGIQSVQFVDKGKKLVFRT 429

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK-----DGDTGSKLY 419
             G    +     + + ++     +  +    SP  +  + S  +     D D G +L+
Sbjct: 430 QEGT---VETYDIESNLKQQFTRRAEDRIDR-SPMAKMAVSSDARLLVVPDADGGLRLW 484


>gi|332886256|gb|EGK06500.1| hypothetical protein HMPREF9456_00374 [Dysgonomonas mossii DSM
           22836]
          Length = 720

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 52/347 (14%), Positives = 110/347 (31%), Gaps = 67/347 (19%)

Query: 116 VIKEGKDRLRVE---FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ-SITGEKG 171
           V  E  + + V      L+D  ++K  +   F S+        H +SD     + T E  
Sbjct: 106 VSPESNNLMIVSPEKIYLYDFVNKK--LSGTFSSTEKM---ENHDLSDKSNNLAYTLENN 160

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F             G   +     D+   N + +  +   I     +SP    +A+   
Sbjct: 161 LF--------VQTPDGKKYDVTSDTDKGIVNGQSVHRNEFGINKGTFWSPKGNLLAFYRM 212

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSM----------ILAPR----------------- 264
           D+  +    L+D     A  +   +             +  P                  
Sbjct: 213 DETMVTDYPLVDISTRIAQLKNIKYPMAGMKSHHVTVGVFNPATHETVFLKTGTPKEKYL 272

Query: 265 ----FSSNGKRALISVQKDEAMD--IYSVDLQSNATERLTNTLFINISASY----SP--- 311
               +S + K   I+          + S D  +   +    TLF      Y    +P   
Sbjct: 273 TNISWSPDEKSVYIAEVNRGQDTCVLRSYDALTGKLQ---TTLFTETHPKYVEPENPVLF 329

Query: 312 ---DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
              D ++ +++S+R+G   LY+  ++G   K+I+           +  +G+ I +     
Sbjct: 330 LKNDPNKFIWQSERDGHNHLYLYDTSGKLLKQITTGNWDVTSVLGFDEKGEAIFYVSTEE 389

Query: 369 EKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSRKKD 411
                 I  +     +   L ++  +     S +G+ +  I++ + +
Sbjct: 390 SPIERHIYKLNLKTGKREKLSKEEGVHNAMLSATGKYVCDIYTSQNN 436



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 59/217 (27%), Gaps = 60/217 (27%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-------- 318
            +GK+  ++   D+ +      +   +  R  N   IN    +SP  + + F        
Sbjct: 166 PDGKKYDVTSDTDKGI------VNGQSVHR--NEFGINKGTFWSPKGNLLAFYRMDETMV 217

Query: 319 -------ESDREGKEQLYVMQSNGSDQKRIS-----------------QDKEASYFDPVW 354
                   S R  + +       G     ++                   KE    +  W
Sbjct: 218 TDYPLVDISTRIAQLKNIKYPMAGMKSHHVTVGVFNPATHETVFLKTGTPKEKYLTNISW 277

Query: 355 SPQGD--LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW------------SPS 400
           SP      IA      +   +        + +          P +             P+
Sbjct: 278 SPDEKSVYIAEVNRGQDTCVLRSYDALTGKLQ--TTLFTETHPKYVEPENPVLFLKNDPN 335

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               I+  ++DG     LY  D +G+    I T  + 
Sbjct: 336 --KFIWQSERDGHN--HLYLYDTSGKLLKQITTGNWD 368


>gi|270294675|ref|ZP_06200877.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270276142|gb|EFA22002.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 855

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 57/294 (19%), Positives = 101/294 (34%), Gaps = 49/294 (16%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL--------- 237
           G  +N L V D   A +R     ++       +SP +  + Y   D+ + +         
Sbjct: 281 GEEQNDLVVFDP--ATMREEVLLKNVPEGYFSWSPTEDYLIYMLTDEGEKVSGPLKRLLH 338

Query: 238 ----------RVYLMDTRI-DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM---- 282
                     R YLM   +     +R+      +     S +GK+ L S  K +      
Sbjct: 339 PDDRIPNSRDRYYLMKYDVATGLSERLTYGSHNVYLNDISPDGKKLLCSTSKPDITRCPF 398

Query: 283 ---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKE-------- 326
               ++ +DL +   + L        SASYSPD  Q++           GK         
Sbjct: 399 SLSSLFEIDLATLQADTLVAWDAYLGSASYSPDGKQLLVTGSPSAFGGIGKNCGEHPIAN 458

Query: 327 ----QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKFAIGV-MKKDG 380
               Q ++M       + I++D   +     W+   G  I F    G+   I   + K G
Sbjct: 459 DFDTQAFIMDLATKKVQAITRDFNPTVSPVQWNRVDGC-IYFDTTDGDCRHIYRYVPKTG 517

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           S E L +E+  + + T +    ++         +    Y+ D   +  TL+  P
Sbjct: 518 SFEMLPLEEDVITSFTLANDNPAVAAYVGGGNTSTGVAYTYDTKKKVSTLLADP 571



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 61/399 (15%), Positives = 113/399 (28%), Gaps = 75/399 (18%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
              N+ S   F+  +       +    +SL         +  + +    +  +L    D 
Sbjct: 117 GKLNVYSPARFEVFVNGESKQVKETAEDSLSQVRPTAVSLRMDPEADYEIVIKLLSSADD 176

Query: 137 K-QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           K Q + K  F     +  +A  ++ D+ +  +    +F SR   VS S  +G    +   
Sbjct: 177 KMQPMLKCEFEKEKDFADVACRMAPDMKRRFSLFNTNFGSRASRVSLS-PNGKYLLTRYS 235

Query: 196 MDRDGANIRY---LTPSRDQILFEPR------FSPNQQKVAYATYDDEDILRVYLMDTRI 246
            + D    R    LT  +   +  P       + PN  K+ Y    +E    V + D   
Sbjct: 236 DNYDVKRSRTRCELTEVKTGRVILPNANEKMNWMPNSNKLYYTVMGEEQNDLV-VFDPAT 294

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----------------------AMDI 284
            R    + N      +  +S      +  +  +                          +
Sbjct: 295 MREEVLLKNVPEGYFS--WSPTEDYLIYMLTDEGEKVSGPLKRLLHPDDRIPNSRDRYYL 352

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
              D+ +  +ERLT           SPD  +++  +    K  +     + S    I   
Sbjct: 353 MKYDVATGLSERLTYGSHNVYLNDISPDGKKLLCSTS---KPDITRCPFSLSSLFEIDLA 409

Query: 345 KEASYFDPVW---------SPQGDLIAFTKFSG---------EKFAIG--------VMKK 378
              +     W         SP G  +  T              +  I         +M  
Sbjct: 410 TLQADTLVAWDAYLGSASYSPDGKQLLVTGSPSAFGGIGKNCGEHPIANDFDTQAFIMDL 469

Query: 379 DGSQERLLVEDSNLQAPTWSP------SGRSLIFSRKKD 411
              + + +  D N   PT SP       G  + F     
Sbjct: 470 ATKKVQAITRDFN---PTVSPVQWNRVDG-CIYFDTTDG 504


>gi|85709824|ref|ZP_01040889.1| prolyl oligopeptidase family protein [Erythrobacter sp. NAP1]
 gi|85688534|gb|EAQ28538.1| prolyl oligopeptidase family protein [Erythrobacter sp. NAP1]
          Length = 721

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 57/156 (36%), Gaps = 20/156 (12%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATER------LTNTLFINISASYSPDSSQIVFESDRE 323
            R  +   ++  +      L   + +        T     +   +++PD S + F + R 
Sbjct: 220 NRVFVFSLENGKVTGDGTPLDGGSADNALVGNTPTKPFGGSGDIAWAPDGSGVYFVARRA 279

Query: 324 GKEQ-------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-----FSGEKF 371
           G E+       +Y    +GS    ++    A    P  SP G  +A+       +  ++ 
Sbjct: 280 GAEEPTSTDLDIYWSDLSGSAPVELTSANPAHDSSPAPSPDGSTLAYLAMARPGYESDRM 339

Query: 372 AIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
            + +      + R L ++++    + +WS  G  L+
Sbjct: 340 VVHLRDLQSGETRALTQNTDLSFGSLSWSADGSYLL 375



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 73/235 (31%), Gaps = 15/235 (6%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G FN   +F  E+         L     D A +            +  ++P+   V 
Sbjct: 214 TRPGHFNRVFVFSLENGKVTGDGTPLDGGSADNALVGNTPTKPFGGSGDIAWAPDGSGVY 273

Query: 228 YATYDDEDI------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDE 280
           +              L +Y  D       +      +   +P  S +G      ++ +  
Sbjct: 274 FVARRAGAEEPTSTDLDIYWSDLSGSAPVELTSANPAHDSSPAPSPDGSTLAYLAMARPG 333

Query: 281 AMD----IYSVDLQSNATERLTNTLFIN-ISASYSPDSSQ-IVFESDREGKEQLYVMQSN 334
                  ++  DLQS  T  LT    ++  S S+S D S  +   +D        +   +
Sbjct: 334 YESDRMVVHLRDLQSGETRALTQNTDLSFGSLSWSADGSYLLATAADVLDTPAFRINPMS 393

Query: 335 GSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           G   +  +    EA        P GD + FT+ S        +    S+ R L +
Sbjct: 394 GEVTELNLIAGNEAHIGSLRPLP-GDRMLFTRDSIGVPNELYLAVGSSEARPLTD 447


>gi|103486423|ref|YP_615984.1| peptidase S9, prolyl oligopeptidase active site region
           [Sphingopyxis alaskensis RB2256]
 gi|98976500|gb|ABF52651.1| peptidase S9, prolyl oligopeptidase active site region
           [Sphingopyxis alaskensis RB2256]
          Length = 668

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 69/192 (35%), Gaps = 21/192 (10%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQ-------SNA-TERLT-NTLFINISASYSPDSS 314
            + ++ +    +++K +  +  S +L        S      LT N    +   + SPD  
Sbjct: 215 AWGTDSRTVFFTLRKADRNEPMSTNLDIYSWLVDSRMMPVNLTANNQATDTLPAPSPDGK 274

Query: 315 QIVFESD-REGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            + + +  R G E     L +      + ++++   + S     W+P G  +  T     
Sbjct: 275 WLAYAAMARPGYEADRLVLMLRNLESGETRKLTDAWDRSVGSIAWAPDGKSLYVTAQDVL 334

Query: 370 KFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +  +  +     +   L       + N+   T  P G +L++SR       + L+  D  
Sbjct: 335 EHPVFRVDVTTGRVEKLKASPETLEGNIGDVTPLP-GGALLYSRN-SALAPTDLFVRDGK 392

Query: 425 GRNETLINTPAY 436
           G+   L +  A 
Sbjct: 393 GKVRQLTSVNAD 404



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 75/264 (28%), Gaps = 79/264 (29%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMD------IYSVD--LQSNATERLTNTLF-INISASYS 310
           + AP  S +G+  +  + + EA        ++ VD   +      + +T      S ++ 
Sbjct: 16  VAAPAASPDGRWVVFQMTETEAGSYKRSTGLWLVDRHAKGAKPIPIADTAGKNETSPAFD 75

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------- 362
            D   + F S+  GK +++ +            D  A       SP    +         
Sbjct: 76  KDG-ILYFLSNASGKSEVWRVDPKVGGAAMQVTDTRADVAGFKISPDATKLLAWGDIPKE 134

Query: 363 ----------------------------FTKF------SGEKFAIGVMKKDGSQERL--- 385
                                       F +        G      +   +G +      
Sbjct: 135 CTDFGCEAKDKGALVGPGSGRLYKDGVGFVRHWDEWETPGTYSRPFIFNLEGGKATAARA 194

Query: 386 ----LVED------SNLQAPTWSPSGRSLIFS-----RKKDGDTGSKLYS---------I 421
               LV D         +   W    R++ F+     R +   T   +YS         +
Sbjct: 195 ADAGLVGDTPSKPFGGGEELAWGTDSRTVFFTLRKADRNEPMSTNLDIYSWLVDSRMMPV 254

Query: 422 DLNGRNETLINTPAYASDPQWVGF 445
           +L   N+     PA + D +W+ +
Sbjct: 255 NLTANNQATDTLPAPSPDGKWLAY 278



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 38/99 (38%), Gaps = 4/99 (4%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRS 258
              LT +       P  SP+ + +AYA         D L + L +       K    +  
Sbjct: 253 PVNLTANNQATDTLPAPSPDGKWLAYAAMARPGYEADRLVLMLRNLESGETRKLTDAWDR 312

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + +  ++ +GK   ++ Q      ++ VD+ +   E+L
Sbjct: 313 SVGSIAWAPDGKSLYVTAQDVLEHPVFRVDVTTGRVEKL 351


>gi|259485708|tpe|CBF82958.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
          Length = 577

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 82/237 (34%), Gaps = 16/237 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D +  ++++       ++    FS + + +A A+        V + DT 
Sbjct: 313 SASDDRTVKIWDTETGSLQHTLEGHSDLVRSVIFSHDSRLLASASDST-----VKIWDTG 367

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                  +   R  + +  FS +  + L S   D  + I+  D  + + +  L       
Sbjct: 368 TGSLQHTLEGHRDWVRSVIFSHD-SQLLASASDDSTVKIW--DTGTGSLQHTLEGHRDWV 424

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  +S DS  +   SD      + +  +     +   +         ++S    L+A +
Sbjct: 425 RSVIFSHDSQLLASASD---DSTVKIWDTGTGSLQHTLEGHRDWVRSVIFSHDSRLLA-S 480

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   I   +K   +  L    S + + ++S   R L  +     D   +++ I
Sbjct: 481 ASDDRTVRIWDTEKGSHKHTLEGHSSLVTSVSFSHDSRLLASASN---DQTVRIWDI 534


>gi|194430975|ref|ZP_03063268.1| conserved hypothetical protein [Shigella dysenteriae 1012]
 gi|194420430|gb|EDX36506.1| conserved hypothetical protein [Shigella dysenteriae 1012]
 gi|332084060|gb|EGI89267.1| hypothetical protein SD15574_5073 [Shigella dysenteriae 155-74]
          Length = 404

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 72/203 (35%), Gaps = 41/203 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA----LISVQKDEAMD--IYSVDLQSNAT-----------E 295
           +GN     +    S  G++     ++ + +DEA         L    T            
Sbjct: 211 VGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKAAGEAPLSGTETTLPAPPRGVVQR 270

Query: 296 RLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT  +        N+   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 271 RLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 330

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I        +   L E      +  A  +SP G
Sbjct: 331 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDG 386

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN 424
           + L +        G +L+S + +
Sbjct: 387 QWLAWME------GGQLWSTETD 403



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVF 318
                 I     QS   E LT       SA    +SPD   + +
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW 391



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +    D 
Sbjct: 298 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 352

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 353 RIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW 391


>gi|323182484|gb|EFZ67888.1| hypothetical protein ECOK1357_4067 [Escherichia coli 1357]
          Length = 404

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDNNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 403



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   D+  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDNNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 3/83 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++   G   R LT ++  I     + P+ + + +    D  I   +     ++   +
Sbjct: 312 QLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSGEVEYLTE 369

Query: 252 RIGNFRSMILAPRFSSNGKRALI 274
              N  S   A  FS +G+    
Sbjct: 370 NHANPPSAD-AVVFSPDGQWLAW 391


>gi|307188484|gb|EFN73227.1| Protein will die slowly [Camponotus floridanus]
          Length = 334

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 93/257 (36%), Gaps = 19/257 (7%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           G      + +   S +  SG   N++   +     ++Y      + +   +FSPN + +A
Sbjct: 5   GPSPGHQTSVNNSSTTAASGTKSNAILKPNYT---LKYTLAGHTKAVSSVKFSPNGEWLA 61

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            +  D      + +  +   +  K I   +  I    +SS+  R L+S   D+ + I+ +
Sbjct: 62  SSAADK----LIKIWGSYDGKFEKTISGHKLGISDVAWSSD-SRLLVSASDDKTLKIWEL 116

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                  + L          +++P S+ IV  S     E + +         +       
Sbjct: 117 S-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF---DESVRIWDVRTGKCLKTLPAHSD 172

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
                 ++  G LI  + + G    I      G   + L++D N  +    +SP+G+ ++
Sbjct: 173 PVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL 230

Query: 406 FSRKKDGDTGSKLYSID 422
            +     D   KL+   
Sbjct: 231 AATL---DNTLKLWDYS 244


>gi|171184720|ref|YP_001793639.1| peptidase S9 prolyl oligopeptidase [Thermoproteus neutrophilus
           V24Sta]
 gi|170933932|gb|ACB39193.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermoproteus neutrophilus V24Sta]
          Length = 572

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 98/300 (32%), Gaps = 25/300 (8%)

Query: 145 FSSPASWRKIAHTISDDIY---QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
              P  WR   H + D +    + ++  +   +  + F S+  V+G  +  L V+     
Sbjct: 32  TGVPQLWRFDGH-VHDMVLPWEERVSEYRVADDGTLAFTSD--VAGDERWRLYVL----E 84

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
                  S + +     +SP+ QK+A+ +  D+       +  R  R+  ++     + +
Sbjct: 85  GEEAAPVSAEGVNSLGAWSPDSQKLAFTSTRDDQQNFHLYLYDRATRSIAKLAEIPGINV 144

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVF 318
              +S  G   L     +  ++   +  +      LT     +    S  Y      +  
Sbjct: 145 VEEWSEVG---LFVTHYETNLESAILLYRGGEVRELTK-RSPDTMSLSPRYIGGGKLLYL 200

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK- 377
            ++      +  M       K + Q      F  VW   G  + F+        + +M  
Sbjct: 201 TNEGWEHMGVAQMDLTTGSWKYLIQLDRDVEFFDVW---GSYLVFSLNEEGSSGLYMMHM 257

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             G   ++      + +  +      ++FS       G ++Y I   G    L  +P + 
Sbjct: 258 PSGLTHKIATPRGVVTSLQYR--EGLILFSLSSINR-GHEVY-IHQGGALRQLTRSPRFG 313



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 5/123 (4%)

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +I + SD  G  QL+           +    E    +   +  G  +AFT         
Sbjct: 23  REIYYISDITGVPQLWRFD---GHVHDMVLPWEERVSEYRVADDGT-LAFTSDVAGDERW 78

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLIN 432
            +   +G +   +  +       WSP  + L F+  +D      LY  D   R+   L  
Sbjct: 79  RLYVLEGEEAAPVSAEGVNSLGAWSPDSQKLAFTSTRDDQQNFHLYLYDRATRSIAKLAE 138

Query: 433 TPA 435
            P 
Sbjct: 139 IPG 141


>gi|21114819|gb|AAM42818.1| dipeptidyl peptidase IV [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66572282|gb|AAY47692.1| dipeptidyl peptidase IV [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 803

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 58/394 (14%), Positives = 110/394 (27%), Gaps = 98/394 (24%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           +V      R R E R  DV                  R         +Y S   E G   
Sbjct: 148 KVRLTADGRYRFEIRDTDVIC--------------DVRAA----CSKVYASEKAEPG--- 186

Query: 175 SRILFVSESVVSGIIKNSLCV----------MDRDG-ANIRYLTPSRDQILFEPR---FS 220
             +L   ++  + I   +L V          + RDG  N  Y T +      +     +S
Sbjct: 187 --VLSPDKTREAFIRNWNLWVRELATGKETQLTRDGVENFGYATDNAGWQHSDNAIVAWS 244

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKR---------------------------- 252
           P+ +K+A    D      +YL+ T++     +                            
Sbjct: 245 PDSRKIATFQQDQRKTGDMYLVSTKLGHPELQSWKYPLAGDKDVTMIERVIIDVPTASVV 304

Query: 253 ----------------IGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNAT 294
                           +     +    +++ + K    +        ++    D  + A 
Sbjct: 305 RLKLPPDQHRSTLCDDVSCSPGLWDDVKWAPDSKTLAFASTSRFHKQVWLRIADASTGAV 364

Query: 295 ERL------TNTLFINISASYS--PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                    T      ++A+++  P S++ V+ S+R    QLY+        KR     E
Sbjct: 365 RTAFDETAKTYYESGQVAANWAYLPGSNEAVWFSERSDWGQLYLYDLQTGKPKRAITSGE 424

Query: 347 ASYFD-PVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            +  +     P      F               +  +  DG    LL  ++   +   SP
Sbjct: 425 GNVTELLRVDPVSRTAWFVGVGKVPGVDPYYQQLWKVSLDGGAPVLLTPEAADHSIALSP 484

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            G   + +          +     +GR  + + T
Sbjct: 485 DGARFVDTYSTTLTPPVSVLRAAADGRTLSTVAT 518


>gi|159904069|ref|YP_001551413.1| hypothetical protein P9211_15281 [Prochlorococcus marinus str. MIT
           9211]
 gi|159889245|gb|ABX09459.1| Hypothetical protein P9211_15281 [Prochlorococcus marinus str. MIT
           9211]
          Length = 572

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 66/186 (35%), Gaps = 34/186 (18%)

Query: 266 SSNGKRALISVQKDE------AMDIYSVDLQSNATE---------RLTNTLFINISASYS 310
           S +G +     + D+        ++Y  D  ++            RL++       +  S
Sbjct: 371 SDDGSKVTFIYKGDDLVEGVSGTNLYVKDFNTSKVSLVTADSQGNRLSDFGQYGSGSQIS 430

Query: 311 PDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-----WSPQGDLIAFT 364
            D S+++F S    G  QLY+   +    K ISQ+   +  +       +S  G  + F 
Sbjct: 431 ADGSKVIFTSRGSNGVAQLYMKDLSSGKLKVISQNSNGNSGNGYSHTGKFSGDGKYVVFQ 490

Query: 365 KF--------SGEKFAIGVMKKDGSQERLLVE-----DSNLQAPTWSPSGRSLIFSRKKD 411
                     +  K  I V     +Q + L +     D +L+ P  +  G+ + F     
Sbjct: 491 SSATNLTDTPTTGKSDIFVYDTSSNQVKRLFDESYEFDDHLRDPNITKEGKYITFRSSSK 550

Query: 412 GDTGSK 417
           G T  +
Sbjct: 551 GITTGE 556



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 74/245 (30%), Gaps = 73/245 (29%)

Query: 268 NGKRALISVQKDEAMD------------------------IYSVDLQSNATER---LTNT 300
           +G+ AL ++ +  ++D                        IY  DL +    R   L+N 
Sbjct: 228 DGRYALFTIDEYGSVDLDGLPGAITGEECDPRGQCEGPQPIYRKDLLTGDVVRVDTLSNG 287

Query: 301 LFINI-----SASYSPDSSQIVFES---DREGKEQ------------LYVMQSNGSDQKR 340
             I        AS S D   ++FES      G  +            +Y       +   
Sbjct: 288 TKIQTKWGIRDASMSSDGRYVIFESPDVRFAGLPEAEWQSKDWSRTLMYRKDLLTGELST 347

Query: 341 ISQDKEASYFDP---------VWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERL 385
           ++   + S               S  G  + F     +         + V   + S+  L
Sbjct: 348 VTTAPDGSTGTGWGSNGGYGMGMSDDGSKVTFIYKGDDLVEGVSGTNLYVKDFNTSKVSL 407

Query: 386 LVEDSNLQAPT----------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +  DS     +           S  G  +IF+  +  +  ++LY  DL+     +I+  +
Sbjct: 408 VTADSQGNRLSDFGQYGSGSQISADGSKVIFTS-RGSNGVAQLYMKDLSSGKLKVISQNS 466

Query: 436 YASDP 440
             +  
Sbjct: 467 NGNSG 471



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 60/184 (32%), Gaps = 19/184 (10%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           +SDD  +     KGD     +  +   V     + + ++  D    R       Q     
Sbjct: 370 MSDDGSKVTFIYKGDDLVEGVSGTNLYVKDFNTSKVSLVTADSQGNR--LSDFGQYGSGS 427

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-----APRFSSNGKRA 272
           + S +  KV + +     + ++Y+ D    +      N             +FS +GK  
Sbjct: 428 QISADGSKVIFTSRGSNGVAQLYMKDLSSGKLKVISQNSNGNSGNGYSHTGKFSGDGKYV 487

Query: 273 LISVQK--------DEAMDIYSVDLQSNATERLTN--TLFIN--ISASYSPDSSQIVFES 320
           +                 DI+  D  SN  +RL +    F +     + + +   I F S
Sbjct: 488 VFQSSATNLTDTPTTGKSDIFVYDTSSNQVKRLFDESYEFDDHLRDPNITKEGKYITFRS 547

Query: 321 DREG 324
             +G
Sbjct: 548 SSKG 551


>gi|315648954|ref|ZP_07902048.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Paenibacillus vortex V453]
 gi|315275635|gb|EFU38989.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Paenibacillus vortex V453]
          Length = 598

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/206 (11%), Positives = 69/206 (33%), Gaps = 10/206 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S ++ ++ +++  +       +        P  +     +    +    G+  L +  +
Sbjct: 23  ISADESRLVFSSSLNGKFNLWAMDLAGDTAYPYPLTYNDQISSFIKLDPEGRHILTAFDR 82

Query: 279 DEA--MDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFESDREGKEQLY--VM 331
           D       +++         L      +    +   S D  ++ + + ++    L   V 
Sbjct: 83  DGNENYQFHALRWNGGEPIPLFEGASGDDKHYFVHLSEDGRRLYYVTSKDNPSFLNSRVF 142

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---E 388
             +  + + + + K+ S      SP    IA+TK     + +  ++++G +   L    E
Sbjct: 143 HLDTKEDQLLLEGKDTSTEMCAVSPDEKTIAYTKMYANTYYVSYVQREGEEPLCLTPSPE 202

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDT 414
             ++           +IF+   + + 
Sbjct: 203 QVHISGDALFIDNDQVIFATDYESEF 228



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 10/146 (6%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--QKRISQDKEASYFD 351
            E+   T  I      S D S++VF S   GK  L+ M   G       ++ + + S F 
Sbjct: 9   VEQFFQTYSIRTFG-ISADESRLVFSSSLNGKFNLWAMDLAGDTAYPYPLTYNDQISSF- 66

Query: 352 PVWSPQGDLI--AFTKFSGEKFAIGVMKKDGSQERLLVEDSN----LQAPTWSPSGRSLI 405
               P+G  I  AF +   E +    ++ +G +   L E ++          S  GR L 
Sbjct: 67  IKLDPEGRHILTAFDRDGNENYQFHALRWNGGEPIPLFEGASGDDKHYFVHLSEDGRRLY 126

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLI 431
           +   KD  +        L+ + + L+
Sbjct: 127 YVTSKDNPSFLNSRVFHLDTKEDQLL 152



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 34/100 (34%), Gaps = 3/100 (3%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS---P 399
             +  S      S     + F+     KF +  M   G          N Q  ++    P
Sbjct: 12  FFQTYSIRTFGISADESRLVFSSSLNGKFNLWAMDLAGDTAYPYPLTYNDQISSFIKLDP 71

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            GR ++ +  +DG+   + +++  NG     +   A   D
Sbjct: 72  EGRHILTAFDRDGNENYQFHALRWNGGEPIPLFEGASGDD 111


>gi|134058665|emb|CAK38649.1| unnamed protein product [Aspergillus niger]
          Length = 1553

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 101/263 (38%), Gaps = 17/263 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ V D     ++ +       +     SPN   +A ++ D   +++++ +   
Sbjct: 1234 SGSSDTTVRVWDIFTGTVQRVLQGHSNAITNISISPNGHLLAASSED--GLIKIWDVSNG 1291

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGK-RALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +      N   M+    FS +G     IS  K    D+ +   +    +++     + 
Sbjct: 1292 DLQHTLSSDNSGGMVCM-LFSPDGNLFLAISRHKTRLWDVVTGLCKWTVEQKVRGHR-LR 1349

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              A++S DS  I   S     E      ++GS  + ++   +    +   SP G+L+A T
Sbjct: 1350 THATFSLDSQLI---SYAVPLEATLRNTADGSLHETLTIPFD-DVDEVALSPSGNLLA-T 1404

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               G    + +      +   ++   + +   +SP G+  +FS   D   G K++++  +
Sbjct: 1405 SHIGGNVDVRLWNTSTGRVEHVLTGCSTEELQFSPDGK--LFSSG-DPWMGVKVWNV-TD 1460

Query: 425  GRNETLINTPAYASDPQWVGFMD 447
            G   TL  T       ++   +D
Sbjct: 1461 G---TLRQTLGAKKTDRYSWLLD 1480



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 72/214 (33%), Gaps = 35/214 (16%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALI 274
             FS + + +A A     +I  +             +  F S  +     RFS + K  L+
Sbjct: 1142 AFSHDGRLLALACARGLNIWDI--------GHSPILSTFVSHNMGSNLVRFSPDDK--LV 1191

Query: 275  SVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            ++ +++ + ++     +   E+   L            SP  S   F +       + V 
Sbjct: 1192 ALVRNDKVTLW----DTARLEKMHALGGHPDGVTVVRPSPTGS---FLASGSSDTTVRVW 1244

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                   +R+ Q    +  +   SP G L+A +   G    I +        +  +   N
Sbjct: 1245 DIFTGTVQRVLQGHSNAITNISISPNGHLLAASSEDG---LIKIWDVSNGDLQHTLSSDN 1301

Query: 392  LQAPT---WSPSGR-SLIFSRKKDGDTGSKLYSI 421
                    +SP G   L  SR K     ++L+ +
Sbjct: 1302 SGGMVCMLFSPDGNLFLAISRHK-----TRLWDV 1330



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 94/242 (38%), Gaps = 32/242 (13%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            SL + +    ++R     R     E  FSP+ + VA   +D     ++ L D+       
Sbjct: 942  SLKLWETSTGDLRNTLVPRTPFGGECAFSPDGKLVAALIFD-----KILLWDSLYGTLKH 996

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN------- 304
             +    +   A  F SN    L+S   D+ ++I+S    S   ++ T     N       
Sbjct: 997  TLKVQSNWGSAMAFLSN--EHLVSTSTDKTLEIWS--TISGKLQK-TAPFGNNEKFMSGG 1051

Query: 305  -ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              + + SPD S +V  + ++G  +L+   +  ++ + I +          +SP G L+A 
Sbjct: 1052 QTTINLSPDGSLLV-RTLKDGTTKLW--DTAKAEPRHILRSPGEEVQTLAFSPDGQLLAT 1108

Query: 364  TKFSGEKFAIGVMKK-DGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                G    + +    +G+ +  L       ++ +  +S  GR L  +  +    G  ++
Sbjct: 1109 GSRYG---ILELWDLCEGTLQHTLRCHATRCHINSIAFSHDGRLLALACAR----GLNIW 1161

Query: 420  SI 421
             I
Sbjct: 1162 DI 1163


>gi|284991972|ref|YP_003410526.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Geodermatophilus obscurus DSM 43160]
 gi|284065217|gb|ADB76155.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geodermatophilus obscurus DSM 43160]
          Length = 695

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 23/185 (12%), Positives = 55/185 (29%), Gaps = 13/185 (7%)

Query: 264 RFSSNGKRAL-ISVQKDE----AMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV 317
             S +G+  + +    D        +  ++  +     L +    ++    +SPD S +V
Sbjct: 240 TLSPDGRLLVRVESVPDGPAGRRDRLVLLETATGEARALVDDPLADLGAPRFSPDGSAVV 299

Query: 318 FES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                    D      L  +       + ++   +     P ++     + F      + 
Sbjct: 300 CVRESMSSHDEPPDYTLLHVDVATGAARELTPGFDRWPSAPQFNADRTAVYFLADDDGRH 359

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETL 430
           A+  +  DG +   +  D        +  G +L   R   D          +  G++   
Sbjct: 360 ALFRVPTDGGEPVRMTTDGAYSDLQVARDGSALYALRSAYDEPPAPVRLDPEATGQHPDP 419

Query: 431 INTPA 435
           +  P 
Sbjct: 420 LPNPG 424



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 92/303 (30%), Gaps = 80/303 (26%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYL-----MDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+ +++A A    +     +      +D    R  +R+        +P ++ +G   
Sbjct: 37  ALSPDGRRLAIAVQTLDREKTAWQSALWEVDPEGRRPARRLTRSAPGESSPVWAPDGSLL 96

Query: 273 LISVQKDEA---------MDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDR 322
             S + D             ++S+          LT+   I+  A  +     +V  S  
Sbjct: 97  FTSARPDPGAGDGTEEPKPALWSLPADGGEARPVLTHPGGISGVALAADSGEVVVTASAM 156

Query: 323 EGKEQ-------------------------LYVMQSNGS--------------------- 336
            G                            +    S+                       
Sbjct: 157 PGAGDAEADAERRKRRKEAGVTAILHEAYPVRYWDSDLGPATPHLFWAGGLPAEPHAGAE 216

Query: 337 ----DQKRISQD---KEASYFDPVWSPQGDLIAFTKF-----SGEKFAIGVMKKDGSQER 384
               + + ++ D      +  D   SP G L+   +      +G +  + +++    + R
Sbjct: 217 RPPVELRDLTPDAVPPSGAGGDLTLSPDGRLLVRVESVPDGPAGRRDRLVLLETATGEAR 276

Query: 385 LLVED--SNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            LV+D  ++L AP +SP G +++  R      D      L  +D+       + TP +  
Sbjct: 277 ALVDDPLADLGAPRFSPDGSAVVCVRESMSSHDEPPDYTLLHVDVATGAAREL-TPGFDR 335

Query: 439 DPQ 441
            P 
Sbjct: 336 WPS 338



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 78/233 (33%), Gaps = 24/233 (10%)

Query: 174 NSRILFVSESVVSG--IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA---- 227
           + R+L   ESV  G    ++ L +++      R L       L  PRFSP+   V     
Sbjct: 244 DGRLLVRVESVPDGPAGRRDRLVLLETATGEARALVDDPLADLGAPRFSPDGSAVVCVRE 303

Query: 228 -YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             +++D+     +  +D     A +    F     AP+F+++          D    ++ 
Sbjct: 304 SMSSHDEPPDYTLLHVDVATGAARELTPGFDRWPSAPQFNADRTAVYFLADDDGRHALFR 363

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V        R+T     +          Q+     R+G     +  +       +  D E
Sbjct: 364 VPTDGGEPVRMTTDGAYSD--------LQVA----RDGSALYALRSAYDEPPAPVRLDPE 411

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPT 396
           A+   P   P    +A     G    +     DG+      +L E ++ + P 
Sbjct: 412 ATGQHPDPLPNPGTLA--GLPGTLQEVEATAADGTPVHCWLVLPEGASAERPA 462


>gi|156549230|ref|XP_001605432.1| PREDICTED: similar to ENSANGP00000025955 [Nasonia vitripennis]
          Length = 324

 Score = 63.1 bits (152), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 79/212 (37%), Gaps = 25/212 (11%)

Query: 219 FSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            S + +   Y  T   +D ++V+       +   ++      +++   +S+G +   S  
Sbjct: 42  HSNDDESSEYVITGSVDDTVKVWEHQNGSLKLKHKLTGHSLGVVSVAVNSDGTKCA-SSS 100

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISAS------YSPDSSQIVFESDREGKEQLYVM 331
            D ++ ++  DL+S           I +         +SPD   IV  S   GK  LY  
Sbjct: 101 LDSSLRVW--DLESGEKI-----FSIEVGPVDIWTVCFSPDDKYIVSGSH-AGKIHLYSA 152

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           + NG  ++ +            +SP G  IA     G    I +      +    +E   
Sbjct: 153 E-NGKQEQSLDTRGGKFTLSVAYSPDGKYIASGAIDG---IINIFDVAYGKVLQTLEGHA 208

Query: 392 L--QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +  ++  +SP  + L+ +     D+  KLY I
Sbjct: 209 MPIRSLCFSPDSQLLLTASD---DSHMKLYDI 237



 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 77/227 (33%), Gaps = 41/227 (18%)

Query: 111 LVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           +V+  V  +G       L    R+WD++  ++I                   S ++    
Sbjct: 84  VVSVAVNSDGTKCASSSLDSSLRVWDLESGEKI------------------FSIEV---- 121

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQK 225
            G    +        + +VSG     + +    +G   + L     +      +SP+ + 
Sbjct: 122 -GPVDIWTVCFSPDDKYIVSGSHAGKIHLYSAENGKQEQSLDTRGGKFTLSVAYSPDGKY 180

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A    D      + + D    +  + +      I +  FS +  + L++   D  M +Y
Sbjct: 181 IASGAIDG----IINIFDVAYGKVLQTLEGHAMPIRSLCFSPD-SQLLLTASDDSHMKLY 235

Query: 286 SV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +   ++       ++      +  +++PD  +    S  +   +++
Sbjct: 236 DIKDANVAGT----MSGHAAWVLGVTFAPDGQKFA-SSSSDHTVKVW 277


>gi|134099853|ref|YP_001105514.1| putative surface layer protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|291006111|ref|ZP_06564084.1| putative surface layer protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|133912476|emb|CAM02589.1| putative surface layer protein [Saccharopolyspora erythraea NRRL
           2338]
          Length = 793

 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 114/351 (32%), Gaps = 50/351 (14%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG-----KDRLRVEFRLWDVK 134
             I      Q      S+P       +G        V  +G       R      + DV 
Sbjct: 477 EPIVPGPAVQPNAFAASLPNPTPAPDIGVAAPRGVAVTPDGRYAFVTSRNTSRVSVIDVA 536

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             + ++   F   P  +  +A                  + R  +VS    +G  +N + 
Sbjct: 537 GGR-VVASVFLKVPPQFVAVAP-----------------DGRRAYVSAYPPTG-PENEVA 577

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V+D   A +    P           SP+ ++V    +D  +I  +      ++   +   
Sbjct: 578 VIDVASATVIAEVPVGKHPYTL-SVSPDGRQVYVPDHDSAEISVMSTDTNSVEGVIRVPR 636

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSP 311
           N  S+     FS +G+ A ++       +   V +   AT  +T ++ +  S    + +P
Sbjct: 637 NPHSV----SFSPDGQTAYVA-----NHESNLVSVVDTATRSVTGSIPVPPSPHSTTITP 687

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           D ++++  S   G     V   +   +K + +    A       +P G   A+    G  
Sbjct: 688 DGTEVLVASYDAGT----VSTIDTGSKKVVATTRVGAKPSSVAIAPDGRH-AYVVNEGSN 742

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWS---PSGRSLIFSRKKDGDTGSKL 418
               V       +++       +AP  +   P GR   +    + ++ S L
Sbjct: 743 ---SVSVIATGNDQVTATVPVGRAPVVAAVTPDGRQ-AYVTNVNSNSVSVL 789


>gi|290511696|ref|ZP_06551064.1| yidR [Klebsiella sp. 1_1_55]
 gi|289775486|gb|EFD83486.1| yidR [Klebsiella sp. 1_1_55]
          Length = 408

 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 57/162 (35%), Gaps = 23/162 (14%)

Query: 280 EAMDIYSVDLQSNATERLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQLY 329
                        +  RLT T        +N+   +   +P ++ I F   D  G  QL+
Sbjct: 255 GTATTMPAPPAGVSQRRLTFTHHRRYPGLVNVPRHWVRANPQATAIAFLMRDDAGVVQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++   G + ++++           W P G+ + F         I            L + 
Sbjct: 315 LISPQGGEPRQLTYHASGIQSAFNWHPSGEWLGFVLED----RIACCHAGTGDITFLTK- 369

Query: 390 SNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +  AP+     +SP G+ + +  + DG    +L+ +   GR
Sbjct: 370 VHAHAPSADAIVFSPDGKQIAWMEEVDGYR--QLW-VTQTGR 408



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 3/95 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++   G   R LT     I     + P+ + + +     ED +      T       
Sbjct: 312 QLWLISPQGGEPRQLTYHASGIQSAFNWHPSGEWLGFV---LEDRIACCHAGTGDITFLT 368

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           ++        A  FS +GK+     + D    ++ 
Sbjct: 369 KVHAHAPSADAIVFSPDGKQIAWMEEVDGYRQLWV 403



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  +++++L+  +     +   +   +  A  +  +G+     ++   
Sbjct: 295 PQATAIAFLMRDDAGVVQLWLISPQGGEPRQLTYHASGIQSAFNWHPSGEWLGFVLE--- 351

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I      +     LT       SA    +SPD  QI +  + +G  QL+V 
Sbjct: 352 -DRIACCHAGTGDITFLTKVHAHAPSADAIVFSPDGKQIAWMEEVDGYRQLWVT 404


>gi|183982582|ref|YP_001850873.1| hypothetical protein MMAR_2572 [Mycobacterium marinum M]
 gi|183175908|gb|ACC41018.1| conserved secreted protein [Mycobacterium marinum M]
          Length = 395

 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 52/297 (17%), Positives = 92/297 (30%), Gaps = 48/297 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA-----TYDDEDILRVYLMDTRI 246
           SL V D  G   R LT        +P  SP+  +VAY      +    ++  + L +   
Sbjct: 55  SLYVSDPAGTPGRKLTDG--PADTQPAPSPDGTRVAYVHKNSASDYGGELWVLDLAEDAP 112

Query: 247 DRAPKRI----------GNFRSMILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQS 291
             AP R+          G+    I+ PR+S  GK+    +Q D         +      +
Sbjct: 113 AGAPHRLVDPAALPPTPGHRLGQIVNPRWSPTGKQIAF-LQNDSNGTMAGGLLIVAAADT 171

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            +              +++PD + I + + R     + V               + + + 
Sbjct: 172 GSVLSPPQRPAAADQYAWAPDGNHIAWANARSDVSPIDVNALEVGAASAPVAM-DTNAYS 230

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMK---KDGSQERLLVEDSNLQAPT------WSPSGR 402
             +   G  I FT           +    +DG              P       ++ +G 
Sbjct: 231 VAYGSDGRSILFTNGDASGPNFTEIPFAFRDGGIYSAAAPGGTGTDPAGAPRTVFARAGS 290

Query: 403 S-----------LIFSRKKDGDTGS--KLYSIDLNGRNETLI--NTPAYASDPQWVG 444
                       L F+  + G+  S   L  +D++G     I  N  A    P+W  
Sbjct: 291 YYSDLAALSSGELAFTETRSGEGESSKSLQVLDVSGGAPQTIAANVAAEVQGPRWGA 347



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 22/152 (14%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQLYVM----QS 333
           A  +Y  D       +LT+    +   + SPD +++ +    S  +   +L+V+     +
Sbjct: 53  AGSLYVSDPAGTPGRKLTDGPA-DTQPAPSPDGTRVAYVHKNSASDYGGELWVLDLAEDA 111

Query: 334 NGSDQKRI--------SQDKE-ASYFDPVWSPQGDLIAFTKFSG-----EKFAIGVMKKD 379
                 R+        +         +P WSP G  IAF +            I      
Sbjct: 112 PAGAPHRLVDPAALPPTPGHRLGQIVNPRWSPTGKQIAFLQNDSNGTMAGGLLIVAAADT 171

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           GS        +      W+P G  + ++  + 
Sbjct: 172 GSVLSPPQRPAAADQYAWAPDGNHIAWANARS 203



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 47/345 (13%), Positives = 100/345 (28%), Gaps = 58/345 (16%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI-AHTISDDIYQSITGEKG 171
              V K        E  + D+ +            PA+      H +       I   + 
Sbjct: 87  VAYVHKNSASDYGGELWVLDLAEDAPAGAPHRLVDPAALPPTPGHRLG-----QIVNPRW 141

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
               + +   ++  +G +   L ++           P R     +  ++P+   +A+A  
Sbjct: 142 SPTGKQIAFLQNDSNGTMAGGLLIVAAADTGSVLSPPQRPAAADQYAWAPDGNHIAWANA 201

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              D+  + +    +  A   +    +   +  + S+G+  L                  
Sbjct: 202 R-SDVSPIDVNALEVGAASAPVA-MDTNAYSVAYGSDGRSILF----------------- 242

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS------DQKRISQDK 345
                 TN        +++       F   R+G   +Y   + G          R    +
Sbjct: 243 ------TNGDA--SGPNFTEI--PFAF---RDGG--IYSAAAPGGTGTDPAGAPRTVFAR 287

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDGSQERLLVEDSNLQA--PTWSP 399
             SY+  + +     +AFT+    +      + V+   G   + +  +   +   P W  
Sbjct: 288 AGSYYSDLAALSSGELAFTETRSGEGESSKSLQVLDVSGGAPQTIAANVAAEVQGPRWGA 347

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            G  + +     G     L   DL+ R    I+T   A    W  
Sbjct: 348 -GDVVAYLESSPGKP---LVITDLDKRTRQQIDTGVDAF--AWPP 386


>gi|309795763|ref|ZP_07690178.1| conserved hypothetical protein [Escherichia coli MS 145-7]
 gi|308120642|gb|EFO57904.1| conserved hypothetical protein [Escherichia coli MS 145-7]
          Length = 416

 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 54/160 (33%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLTNT-----LFINISASY----SPDSSQIVF-ESDREGKEQL 328
                      +     RLT T       +     Y    +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRYWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 11/127 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +   +  R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+
Sbjct: 297 NVPRYWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGE 356

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQ 327
                +       I     QS   E LT       SA    +SPD   + +    EG  Q
Sbjct: 357 WLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-Q 408

Query: 328 LYVMQSN 334
           L++ +++
Sbjct: 409 LWITETD 415



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 403


>gi|24372205|ref|NP_716247.1| dipeptidyl peptidase IV, putative [Shewanella oneidensis MR-1]
 gi|24346117|gb|AAN53692.1|AE015508_8 dipeptidyl peptidase IV, putative [Shewanella oneidensis MR-1]
          Length = 826

 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 81/226 (35%), Gaps = 13/226 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++  +A     +          T+  R  + + ++     A ++  +  +  + V+  + 
Sbjct: 337 DEDVLAKVKAQNAKAKGESYQSTKAPRKIQLMQDWGWTQSAIQWHESENKLAVMVEAIDN 396

Query: 282 MDIYSVDLQSNATERLTNTLFINISAS--------YSPDSSQIVFESDREGKEQLYVMQS 333
            D +   +  +  + +T     + +          + P +  + + S+  G  QLY +++
Sbjct: 397 KDRWIATVDLSKGKFITEHRLHDDAWVNYDYNQFGWIPGTDTLYYLSEETGYSQLY-LKA 455

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSN 391
           +G   + ++Q K     D   SP  + I +         + +  +     +   L +   
Sbjct: 456 SGEKPRALTQGKFV-VSDITLSPDANYIYYKANQSHPGIYNVHRVNLTSGKNEQLTQWDG 514

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               + SP G  L+ +  +      +LY   + G  + L +  + A
Sbjct: 515 NLDYSLSPDGAKLLLNASRRTQPN-ELYIQPIGGELKQLTSYTSEA 559



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 71/201 (35%), Gaps = 17/201 (8%)

Query: 191 NSLCVMDRDGANIRYLTPSR-------DQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
               +   D +  +++T  R       +    +  + P    + Y + +        L  
Sbjct: 397 KDRWIATVDLSKGKFITEHRLHDDAWVNYDYNQFGWIPGTDTLYYLSEETG---YSQLYL 453

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
                 P+ +   + ++     S +         +      +++ V+L S   E+LT   
Sbjct: 454 KASGEKPRALTQGKFVVSDITLSPDANYIYYKANQSHPGIYNVHRVNLTSGKNEQLTQWD 513

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDL 360
             N+  S SPD ++++  + R  +     +Q  G + K+++     ++    W +P  ++
Sbjct: 514 G-NLDYSLSPDGAKLLLNASRRTQPNELYIQPIGGELKQLTSYTSEAFKQYPWQAP--EV 570

Query: 361 IAFTKFSG-EKFAIGVMKKDG 380
           IA     G  +    V    G
Sbjct: 571 IAVPSNHGAGQIYARVYLPQG 591


>gi|149370558|ref|ZP_01890247.1| putative peptidase [unidentified eubacterium SCB49]
 gi|149356109|gb|EDM44666.1| putative peptidase [unidentified eubacterium SCB49]
          Length = 648

 Score = 63.1 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 66/178 (37%), Gaps = 5/178 (2%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIV 317
              A  FS +  + LI+  +    +IY V  +      +T +   +I A SY P   +I+
Sbjct: 44  NASAAGFSFDNSKVLITSNRSGINNIYEVASEGGDLIPITKSDSASIYAVSYFPKDDRIL 103

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGV 375
           F  D  G E   +   +    K ++  +        W+  G+   F       +   +  
Sbjct: 104 FTMDGNGDEIYKLFVKDNDKVKSLTPKQGIRTGFVGWAEDGNSFYFQMNDRDPQFMDLYQ 163

Query: 376 MKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           M       + + +   NL     + +G+ +  S        S LY ++L  + +T IN
Sbjct: 164 MNTSDYTYKSIYQLGPNLDFGIIANNGKYITVSEAIT-TNNSNLYLVELATKKQTKIN 220


>gi|327404631|ref|YP_004345469.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327320139|gb|AEA44631.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 798

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 57/351 (16%), Positives = 109/351 (31%), Gaps = 65/351 (18%)

Query: 131 WDVKDRKQIIG--KKFFSSPASWRKIAH-TISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           +D  + K++      FF     +    +   +++ Y          ++ + F    +   
Sbjct: 124 YDPFNTKELAAPVDAFFELGKCYHAAGNINKAEEFYNKFLESSIAKSNNVFFAKLYLEQC 183

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP----NQQKVAYATYDD-EDILRVYLM 242
            +  +         N+             P FSP    +   + Y +     +      +
Sbjct: 184 KVARTEFASP---KNVYLKNIGSAVNTENPEFSPVISLDGSALYYTSRRKWANGASDKGL 240

Query: 243 DTRIDRAPKRI----GNFRSMILAP---------------RFSSNGKRALISVQKDEAMD 283
           D+R +  P+ I     +F S  + P                 S + +R  +        D
Sbjct: 241 DSRYNLYPEDIYVSYRDFDSTWMQPVKLEFCDPLQNEATLAVSPDERRVYVYQDTKGNGD 300

Query: 284 IYSVDLQSNATERLT-------NTLFINISASYSPDSSQIVFESDR----EGKEQLYVMQ 332
           I+  D  +N  +++T       NT       + SPD   + F S+R     G++  Y ++
Sbjct: 301 IFYSDFSTNKFQKVTHLDDKKINTNDWETHVTVSPDGQMLYFVSNRKGGMGGRDIYYCLK 360

Query: 333 SNGSDQKRISQ-----DKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQER 384
              S            +       P  S     + F+         F I + K D   + 
Sbjct: 361 QKDSTWGNPVNAGPNINGPMDDESPFVSIDNGTLYFSSNGNKSMGGFDIFMSKLDSKGQ- 419

Query: 385 LLVEDSNLQAPTW---SP-SGR--SLIFSRKKDGDTGSKLYSIDLNGRNET 429
                     P     SP +     L ++   DG TG  L SI ++G+ E 
Sbjct: 420 --------WGPAMNLGSPINSTCDDLFYTTTTDGLTGY-LTSIRVDGKGEK 461


>gi|315039635|ref|XP_003169193.1| hypothetical protein MGYG_08739 [Arthroderma gypseum CBS 118893]
 gi|311337614|gb|EFQ96816.1| hypothetical protein MGYG_08739 [Arthroderma gypseum CBS 118893]
          Length = 578

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 73/210 (34%), Gaps = 18/210 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +++     + +   +FSP+   VA  + D      + + +T             + I
Sbjct: 178 YKEKFVLKGHQRGVSAVKFSPDGTMVASCSAD----ATIKIWNTATGSLIHTFEGHLAGI 233

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVF 318
               +S +G+    S   D+++ ++  D+ +                S ++SP  + +V 
Sbjct: 234 STISWSPDGETIA-SGSDDKSIRLW--DVITGKPYPNPFVGHHNYVYSIAFSPKGNMMVS 290

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E +++     +   R             +   G LIA     G    I +   
Sbjct: 291 GSY---DEAVFIWDVRSARIMRSLPAHSDPVAGVDFVRDGTLIASCASDG---LIRIWDS 344

Query: 379 DGSQ-ERLLVEDSNLQAPT--WSPSGRSLI 405
              Q  R LV + N    +  +SP+G+ ++
Sbjct: 345 ATGQCLRTLVHEDNPPVASVKFSPNGKFIL 374



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 66/202 (32%), Gaps = 9/202 (4%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            ++G    +       V S     ++ + +    ++ +        +    +SP+ + +A
Sbjct: 187 HQRGVSAVKFSPDGTMVASCSADATIKIWNTATGSLIHTFEGHLAGISTISWSPDGETIA 246

Query: 228 YATYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             + D      + L D    +  P       + + +  FS  G   + S   DEA+ I+ 
Sbjct: 247 SGSDDK----SIRLWDVITGKPYPNPFVGHHNYVYSIAFSPKGNMMV-SGSYDEAVFIWD 301

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V   +     L           +  D + I   +  +G  +++   + G   + +  +  
Sbjct: 302 V-RSARIMRSLPAHSDPVAGVDFVRDGTLIASCAS-DGLIRIWD-SATGQCLRTLVHEDN 358

Query: 347 ASYFDPVWSPQGDLIAFTKFSG 368
                  +SP G  I      G
Sbjct: 359 PPVASVKFSPNGKFILAWSLDG 380



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 45/135 (33%), Gaps = 16/135 (11%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD + +   S       + +  +         +   A      WSP G+ IA      
Sbjct: 196 FSPDGTMVASCS---ADATIKIWNTATGSLIHTFEGHLAGISTISWSPDGETIASGSDDK 252

Query: 369 EKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               I +      +      +   + + +  +SP G  ++      G     ++  D+  
Sbjct: 253 S---IRLWDVITGKPYPNPFVGHHNYVYSIAFSPKGNMMV-----SGSYDEAVFIWDV-- 302

Query: 426 RNETLINTPAYASDP 440
           R+  ++ +    SDP
Sbjct: 303 RSARIMRSLPAHSDP 317



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 28/167 (16%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    RLWDV   K          P     + H   + +Y      KG        
Sbjct: 246 ASGSDDKSIRLWDVITGK----------PYPNPFVGHH--NYVYSIAFSPKG-------- 285

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
               +VSG    ++ + D   A I    P+    +    F  +   +A    D      +
Sbjct: 286 --NMMVSGSYDEAVFIWDVRSARIMRSLPAHSDPVAGVDFVRDGTLIASCASDG----LI 339

Query: 240 YLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIY 285
            + D+   +  + + +  +  + + +FS NGK  L +   D  + ++
Sbjct: 340 RIWDSATGQCLRTLVHEDNPPVASVKFSPNGKFIL-AWSLDGCVRLW 385


>gi|254236534|ref|ZP_04929857.1| hypothetical protein PACG_02532 [Pseudomonas aeruginosa C3719]
 gi|126168465|gb|EAZ53976.1| hypothetical protein PACG_02532 [Pseudomonas aeruginosa C3719]
          Length = 335

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 67/182 (36%), Gaps = 18/182 (9%)

Query: 269 GKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESD 321
           G R +        D + ++Y  D +S +T +L N    NI     A +SPD   + F   
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQL-NQPGWNIEDPMNAHFSPDGRYLTFMGR 103

Query: 322 REGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           + G   ++     G+     ++        DP +S  G  +        + A  V   DG
Sbjct: 104 QNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQVVLKHEGDIRLATLVFNGDG 163

Query: 381 SQE----RLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           S      + +  D        P  +PSG+ ++++         ++   +L     + + T
Sbjct: 164 SVGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYAT--GAGDSLRVVRRNLENGQVSALAT 221

Query: 434 PA 435
           PA
Sbjct: 222 PA 223



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 60/188 (31%), Gaps = 14/188 (7%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQK 278
             ++ Y +Y +       L          R  N     +       FS +G+      ++
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIEDPMNAHFSPDGRYLTFMGRQ 104

Query: 279 DEAMDIYSVDLQSNA-TERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNG- 335
           + A  +++  +        LT      N    +S D  Q+V + + + +    V   +G 
Sbjct: 105 NGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQVVLKHEGDIRLATLVFNGDGS 164

Query: 336 ---SDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--- 388
              S  K ++ D  ++    P  +P G  + +   +G+   +     +  Q   L     
Sbjct: 165 VGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYATGAGDSLRVVRRNLENGQVSALATPAA 224

Query: 389 DSNLQAPT 396
                 P 
Sbjct: 225 GGRDYYPV 232



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 75/278 (26%), Gaps = 15/278 (5%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH                     L     +  G   ++L + D    + R L      I 
Sbjct: 25  AHAACTANLALQPASSLPALGGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIE 84

Query: 215 --FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKR 271
                 FSP+ + + +          V+       +AP  +          P+FS +G++
Sbjct: 85  DPMNAHFSPDGRYLTFMG-RQNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQ 143

Query: 272 ALISVQKDEAMDIYSVDLQSN---ATERLTNTLFINIS---ASYSPDSSQIVFESDREGK 325
            ++  + D  +     +   +   +  +       +        +P    +V+ +     
Sbjct: 144 VVLKHEGDIRLATLVFNGDGSVGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYATGAGDS 203

Query: 326 EQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---KKDGS 381
            ++            + +       + PV                   + ++      G+
Sbjct: 204 LRVVRRNLENGQVSALATPAAGGRDYYPVVRDYTAYFLSRTQPAGNDQLAMVVPNSPPGT 263

Query: 382 QERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKL 418
              L +          +P +   LIFS      T S L
Sbjct: 264 PAILPLNHCQGDNSDAAPVNEDYLIFSSTSFDPTYSLL 301


>gi|195049507|ref|XP_001992734.1| GH24921 [Drosophila grimshawi]
 gi|193893575|gb|EDV92441.1| GH24921 [Drosophila grimshawi]
          Length = 357

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 83/224 (37%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 58  YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 113

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + ++ +     + + L          +++P S+ IV  S
Sbjct: 114 SDVAWSSD-SRLLVSGSDDKTLKVWELS-SGKSLKTLKGHSNYVFCCNFNPQSNLIVSGS 171

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 172 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 226

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 227 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 267


>gi|149724074|ref|XP_001504097.1| PREDICTED: WD repeat and SOCS box-containing 1 [Equus caballus]
          Length = 421

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 71/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+++ ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKSLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC---SVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 268 GALLATASYDT---RVYIWDPHTGG--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 322

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 323 GLHVA---SLADDKMVRFWRIDED 343



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 79/259 (30%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++           R +  T + D               ++ VS S   
Sbjct: 151 RIKIWDVYTGKLLL--NLVDHTEVVRDL--TFAPD-------------GSLILVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 +  +  DG N+  +       ++   FSP+   +            V+L +   
Sbjct: 194 ---SLRVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSMLCSV----GASKAVFLWNMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + I+  D  +               
Sbjct: 246 YTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHTGGILMEFGHLFPPPT 302

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   +   +D +   + + +  +     +++          
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 357

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 358 AFSTDGSVLAAGTHDGSVY 376



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 62/155 (40%), Gaps = 8/155 (5%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L +   +    +++PD S I+  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKSLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K + +  +   +   +SP   ++     S   F +  M K     +L     
Sbjct: 200 LKDDGNMMKVL-RGHQNWVYSCAFSPDSSMLCSVGASKAVF-LWNMDKYTMIRKLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           ++ A  +SP G  L  +     DT   ++     G
Sbjct: 258 DVVACDFSPDGALLATASY---DTRVYIWDPHTGG 289


>gi|221091281|ref|XP_002162258.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 331

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 83/227 (36%), Gaps = 22/227 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             I+Y      + +   +FSPN + +A A+ D      + +      +  K I   +  I
Sbjct: 32  YTIKYTLTGHTKAISSVKFSPNGEWLATASADK----LIKIWGAYDGKFEKTIAGHKLGI 87

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  + L+S   D+ + I+++ +     + L          +++P S+ IV  S
Sbjct: 88  SDCAWSSD-SKLLVSASDDKTLKIWAL-ITGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 145

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I     D 
Sbjct: 146 F---DESVRIWDVKTGKCLKTLPAHSDPVSAVDFNRDGALIVSSSYDG-LCRIW----DT 197

Query: 381 SQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +  + L    + + P      +SP+G+ ++ +     D   KL+   
Sbjct: 198 ASGQCLKTLIDDENPPVSFVRFSPNGKYILAATL---DNTLKLWDYS 241



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 11/189 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    S+ + D          P+    +    F+ +   +  ++YD   + R++  DT
Sbjct: 142 VSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVDFNRDGALIVSSSYD--GLCRIW--DT 197

Query: 245 RIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF- 302
              +  K  I +    +   RFS NGK  L +   D  + ++    +    +  T     
Sbjct: 198 ASGQCLKTLIDDENPPVSFVRFSPNGKYIL-AATLDNTLKLWDYS-KGKCLKTYTGHKND 255

Query: 303 -INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              I A++S    + +     +    +Y+      +  +  +            P  ++I
Sbjct: 256 KYCIFANFSVTGGKWIISGSED--NLVYIWNLQTKEVVQTLEGHTDVVLCCACHPTENII 313

Query: 362 AFTKFSGEK 370
           A      +K
Sbjct: 314 ASGSLENDK 322


>gi|304408133|ref|ZP_07389782.1| putative lipoprotein [Paenibacillus curdlanolyticus YK9]
 gi|304342821|gb|EFM08666.1| putative lipoprotein [Paenibacillus curdlanolyticus YK9]
          Length = 383

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/247 (14%), Positives = 86/247 (34%), Gaps = 34/247 (13%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +    L ++  D    +    + +  +        S +       +  +E+   Y ++L+
Sbjct: 110 EKRYPLNLFAYDLNTGKERLLVADENNKHANFAVLSPSKAYMFYKMNIEESAYAYILNLK 169

Query: 291 SNATERLTNTLFINISASYSPDSSQI-------VFESDREGKEQLYVMQSNGSDQKRISQ 343
           +   ++++  L       +  D + +       VF +  +   +  +  +  +    +SQ
Sbjct: 170 TGEKKQVSEELVPIRDGVWDGDDTVVFAGIPGQVFAAHPDRNTEKLLSDAGRAMNPVMSQ 229

Query: 344 DK----------------------EASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDG 380
                                    A   + + SP G+ +A  K +G+ +  + +    G
Sbjct: 230 GVLYYTDMLTLKAYQPKSGKTSTISAKVENVMPSPDGNQLAIVKMTGDTERTLVITDLKG 289

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSIDLNGRNETLINTPA-YAS 438
           + ++ L   + +   +WSP G  L ++   + + G K +   + +    T       YAS
Sbjct: 290 NVKKTLSTGTQIFGVSWSPDGTKLAYNLIDEAENGVKGIVVANASTGKTTFATIDVPYAS 349

Query: 439 DP-QWVG 444
           DP  W  
Sbjct: 350 DPVAWSP 356



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 5/109 (4%)

Query: 266 SSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---D 321
           S +G +  I  +  D    +   DL+ N  + L+    I    S+SPD +++ +      
Sbjct: 263 SPDGNQLAIVKMTGDTERTLVITDLKGNVKKTLSTGTQI-FGVSWSPDGTKLAYNLIDEA 321

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             G + + V  ++       + D   +     WSP G  +  + F  + 
Sbjct: 322 ENGVKGIVVANASTGKTTFATIDVPYASDPVAWSPSGKKLVASTFINDD 370



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 103/314 (32%), Gaps = 48/314 (15%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           +  EG+ R  +    +D+   K+    +   +  + +     +       +  +     S
Sbjct: 105 ITVEGEKRYPLNLFAYDLNTGKE----RLLVADENNKHANFAVLSPSKAYMFYKMNIEES 160

Query: 176 RILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
              ++    +     +   L  + RDG                  +  +   V +A    
Sbjct: 161 AYAYILNLKTGEKKQVSEELVPI-RDG-----------------VWDGD-DTVVFA---- 197

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              +   +     DR  +++ +     + P  S   +  L      + + + +   +S  
Sbjct: 198 --GIPGQVFAAHPDRNTEKLLSDAGRAMNPVMS---QGVLY---YTDMLTLKAYQPKSGK 249

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDP 352
           T  + +    N+    SPD +Q+         E+ L +    G+ +K +S   +   F  
Sbjct: 250 TSTI-SAKVENVMP--SPDGNQLAIVKMTGDTERTLVITDLKGNVKKTLSTGTQ--IFGV 304

Query: 353 VWSPQGDLIAFTKFS---GEKFAIGVMKKDGSQERLLV-EDSNLQAP-TWSPSGRSLIFS 407
            WSP G  +A+            I V      +      +      P  WSPSG+ L+ S
Sbjct: 305 SWSPDGTKLAYNLIDEAENGVKGIVVANASTGKTTFATIDVPYASDPVAWSPSGKKLVAS 364

Query: 408 RKKDGDTGSKLYSI 421
              + D G+++ + 
Sbjct: 365 TFINDDKGNRVVTY 378


>gi|119193472|ref|XP_001247342.1| hypothetical protein CIMG_01113 [Coccidioides immitis RS]
          Length = 505

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 70/208 (33%), Gaps = 14/208 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              + +     + +   +FSP+   +A  + D      + + ++   +           I
Sbjct: 161 YKQKLVLKGHQRGVSAVQFSPDGSMIASCSADG----TIRVWNSSTGKLIHTFEGHLGGI 216

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S +G     S   D+++ +++V                  S ++SP  + +V  S
Sbjct: 217 STLCWSPDGTFIA-SGSDDKSIRLWNVLTGKQHPTPFLGHHNYIYSIAFSPKGNMLVSGS 275

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E +++     +   R             +   G LIA     G    I +     
Sbjct: 276 Y---DEAVFLWDVRSAHVMRSLPAHSDPVAGIDFIRDGTLIASCASDG---LIRIWDSAT 329

Query: 381 SQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
            Q  R LV + N  +    +SP+G+ ++
Sbjct: 330 GQCLRTLVHEDNPPVMGVKFSPNGKYVL 357



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 61/179 (34%), Gaps = 11/179 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID-RAP 250
           ++ V +     + +        +    +SP+   +A  + D      + L +     + P
Sbjct: 194 TIRVWNSSTGKLIHTFEGHLGGISTLCWSPDGTFIASGSDDK----SIRLWNVLTGKQHP 249

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASY 309
                  + I +  FS  G   + S   DEA+ ++  D++S    R L           +
Sbjct: 250 TPFLGHHNYIYSIAFSPKGNMLV-SGSYDEAVFLW--DVRSAHVMRSLPAHSDPVAGIDF 306

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             D + I   +  +G  +++   + G   + +  +         +SP G  +      G
Sbjct: 307 IRDGTLIASCAS-DGLIRIWD-SATGQCLRTLVHEDNPPVMGVKFSPNGKYVLAWTLDG 363


>gi|89110324|ref|AP_004104.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
 gi|170018075|ref|YP_001723029.1| hypothetical protein EcolC_0014 [Escherichia coli ATCC 8739]
 gi|170083193|ref|YP_001732513.1| hypothetical protein ECDH10B_3875 [Escherichia coli str. K-12
           substr. DH10B]
 gi|238902779|ref|YP_002928575.1| hypothetical protein BWG_3379 [Escherichia coli BW2952]
 gi|256025580|ref|ZP_05439445.1| hypothetical protein E4_19562 [Escherichia sp. 4_1_40B]
 gi|301028476|ref|ZP_07191720.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|307140389|ref|ZP_07499745.1| hypothetical protein EcolH7_19892 [Escherichia coli H736]
 gi|85676355|dbj|BAE77605.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
           W3110]
 gi|169753003|gb|ACA75702.1| conserved hypothetical protein [Escherichia coli ATCC 8739]
 gi|169891028|gb|ACB04735.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
 gi|238860400|gb|ACR62398.1| conserved protein [Escherichia coli BW2952]
 gi|260447293|gb|ACX37715.1| conserved hypothetical protein [Escherichia coli DH1]
 gi|299878484|gb|EFI86695.1| conserved hypothetical protein [Escherichia coli MS 196-1]
 gi|309704136|emb|CBJ03483.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
 gi|315138273|dbj|BAJ45432.1| conserved hypothetical protein [Escherichia coli DH1]
 gi|315618605|gb|EFU99191.1| uncharacterized protein yidR [Escherichia coli 3431]
 gi|323934960|gb|EGB31338.1| hypothetical protein ERCG_03783 [Escherichia coli E1520]
          Length = 404

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 57/161 (35%), Gaps = 26/161 (16%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 DSNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +  +P+     +SP G+ L +        G +L+  + +
Sbjct: 370 -HHANSPSADAVVFSPDGQWLAWME------GGQLWITETD 403



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT     + SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTEHHANSPSADAVVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +    D 
Sbjct: 298 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 352

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 353 RIACAHAQSGEVEYLTEHHANSPSAD-AVVFSPDGQWLAW 391


>gi|258647724|ref|ZP_05735193.1| putative dipeptidyl aminopeptidase IV [Prevotella tannerae ATCC
           51259]
 gi|260852565|gb|EEX72434.1| putative dipeptidyl aminopeptidase IV [Prevotella tannerae ATCC
           51259]
          Length = 723

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 59/352 (16%), Positives = 120/352 (34%), Gaps = 37/352 (10%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS-- 159
           DW            V +  +D +RV    +++  R ++  K F     +    AH I+  
Sbjct: 128 DWKKKAI-------VWQAERDSVRVNEE-FNIPSRSEVYAKDFDLYLRTADSKAHRITTD 179

Query: 160 ---DDIYQSITGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
              D +Y            +  + S S    +    +   V D    +I       D I 
Sbjct: 180 GSKDIVYGQAVHRDEFGIKKGAYFSPSGQLLAYYRMDQSMVEDYPLVDIFTREAKLDAIK 239

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           + P       KV    Y+ +    V+L         +   N         ++ + K   +
Sbjct: 240 Y-PMAGMTSHKVTVGVYNPKTEQTVWLQAGDPTD--RYFTNI-------SWAPDEKTIYM 289

Query: 275 SV--QKDEAMDIYSVDLQSNATERL--TNTLFINISA----SYSP-DSSQIVFESDREGK 325
               +  +  ++ + D+ +   + +  T T    +      ++ P DSS+ +++S+++G 
Sbjct: 290 IEMPRSQKKTELVAYDVATGQRKGVLYTETHEKYVHPMHPLTFLPWDSSKFIYQSEKDGY 349

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQE 383
             LY+  + G+  K+I++ +        ++ +   +                +  D  + 
Sbjct: 350 NHLYLFDTKGNQLKQITKGEFVVLDLVGFNTKTKSVIIQSNEAHPLHHNYYAVNIDNGKR 409

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            LL           SP G  L F R  + D   K+   +    N TL+ T A
Sbjct: 410 TLLDNGKGTHRAMLSPDGTML-FDRWSEPDVFRKIAVRNTATANATLLQTDA 460


>gi|317481350|ref|ZP_07940418.1| prolyl oligopeptidase [Bacteroides sp. 4_1_36]
 gi|316902446|gb|EFV24332.1| prolyl oligopeptidase [Bacteroides sp. 4_1_36]
          Length = 845

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 56/294 (19%), Positives = 99/294 (33%), Gaps = 49/294 (16%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL--------- 237
           G  +N L V D   A +R     ++       +SP +  + Y   D+ + +         
Sbjct: 271 GEEQNDLVVFDP--ATMREEVLLKNVPEGYFSWSPTEDYLIYMLTDEGEKVSGPLKRLLH 328

Query: 238 ----------RVYLMDTRI-DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM---- 282
                     R YLM   +     +R+      +     S +GK+ L S  K +      
Sbjct: 329 PDDRIPNSRDRYYLMKYDVATGLSERLTYGSHNVYLNDISPDGKKLLCSTSKPDITRCPF 388

Query: 283 ---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKE-------- 326
               ++ +DL +   + L        SASYSPD  Q++           GK         
Sbjct: 389 SLSSLFEIDLTTLQADTLVAWDAYLGSASYSPDGKQLLVTGSPSAFGGIGKNCGEHPIAN 448

Query: 327 ----QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKFAIGV-MKKDG 380
               Q ++M       + I++D   +     W+   G  I F    G+   I   + K G
Sbjct: 449 DFDTQAFIMDLATKKVQAITRDFNPTVSPVQWNRVDGC-IYFDTTDGDCRHIYRYVPKTG 507

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             E L +E+  + + T +     +         +    Y+ D   +  TL+  P
Sbjct: 508 GFEMLPLEEDVITSFTLANDNPVVAAYVGGGNTSTGVAYTYDTKKKVSTLLANP 561



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 63/413 (15%), Positives = 115/413 (27%), Gaps = 75/413 (18%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
              N+ S   F+  +       +    +SL         +  + +    +  +L    D 
Sbjct: 107 GKLNVYSPARFEVFVNGESKQVKETAEDSLSQVRPTAVSLRMDPEADYEIVIKLLSSADD 166

Query: 137 K-QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           K Q + K  F     +  +A  ++ D+ +  +    +F SR   VS S  +G    +   
Sbjct: 167 KMQPMLKCEFEKEKDFADVACRMAPDMKRRFSLFNTNFGSRASKVSLS-PNGKYLLTRYS 225

Query: 196 MDRDGANIRY---LTPSRDQILFEPR------FSPNQQKVAYATYDDEDILRVYLMDTRI 246
            + D    R    LT  +   +  P       + PN  K+ Y    +E    V + D   
Sbjct: 226 DNYDVKRSRTRCELTEVKTGRVILPNANEKMNWMPNSNKLYYTVMGEEQNDLV-VFDPAT 284

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----------------------AMDI 284
            R    + N      +  +S      +  +  +                          +
Sbjct: 285 MREEVLLKNVPEGYFS--WSPTEDYLIYMLTDEGEKVSGPLKRLLHPDDRIPNSRDRYYL 342

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
              D+ +  +ERLT           SPD  +++  +    K  +     + S    I   
Sbjct: 343 MKYDVATGLSERLTYGSHNVYLNDISPDGKKLLCSTS---KPDITRCPFSLSSLFEIDLT 399

Query: 345 KEASYFDPVW---------SPQGDLIAFTKFSG---------EKFAIG--------VMKK 378
              +     W         SP G  +  T              +  I         +M  
Sbjct: 400 TLQADTLVAWDAYLGSASYSPDGKQLLVTGSPSAFGGIGKNCGEHPIANDFDTQAFIMDL 459

Query: 379 DGSQERLLVEDSNLQAPTWSP------SGRSLIFSRKKDGDTGSKLYSIDLNG 425
              + + +  D N   PT SP       G  + F            Y     G
Sbjct: 460 ATKKVQAITRDFN---PTVSPVQWNRVDG-CIYFDTTDGDCRHIYRYVPKTGG 508


>gi|311267924|ref|XP_003131801.1| PREDICTED: WD repeat and SOCS box-containing protein 1-like [Sus
           scrofa]
          Length = 421

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC---SVGASKAVFLWDMDKYTMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 268 GALLATASYDT---RVYIWDPHTGD--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 322

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 323 GLHVA---SLADDKMVRFWRIDED 343



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 80/259 (30%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++           R +  T + D               ++ VS S   
Sbjct: 151 RIKIWDVYTGKLLL--NLVDHTEVVRDL--TFAPD-------------GSLILVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L D   
Sbjct: 194 TL---RVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSMLCSV----GASKAVFLWDMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + I+  D  +               
Sbjct: 246 YTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHTGDILMEFGHLFPPPT 302

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   +   +D +   + + +  +     +++          
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 357

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 358 AFSTDGSVLAAGTHDGSVY 376



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L +   +    +++PD S I+  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K + +  +   +   +SP   ++     S   F +  M K     +L     
Sbjct: 200 LKDDGNMMKVL-RGHQNWVYSCAFSPDSSMLCSVGASKAVF-LWDMDKYTMIRKLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 258 DVVACDFSPDGALLATASY 276



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 32/99 (32%), Gaps = 4/99 (4%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 149 NGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 208

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +L    N   +  +SP    L             L+ +D
Sbjct: 209 VLRGHQNWVYSCAFSPDSSML---CSVGASKAVFLWDMD 244


>gi|77747946|ref|NP_638894.2| dipeptidyl peptidase IV [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|77761099|ref|YP_241712.2| dipeptidyl peptidase IV [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 770

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 58/394 (14%), Positives = 110/394 (27%), Gaps = 98/394 (24%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           +V      R R E R  DV                  R         +Y S   E G   
Sbjct: 115 KVRLTADGRYRFEIRDTDVIC--------------DVRAA----CSKVYASEKAEPG--- 153

Query: 175 SRILFVSESVVSGIIKNSLCV----------MDRDG-ANIRYLTPSRDQILFEPR---FS 220
             +L   ++  + I   +L V          + RDG  N  Y T +      +     +S
Sbjct: 154 --VLSPDKTREAFIRNWNLWVRELATGKETQLTRDGVENFGYATDNAGWQHSDNAIVAWS 211

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKR---------------------------- 252
           P+ +K+A    D      +YL+ T++     +                            
Sbjct: 212 PDSRKIATFQQDQRKTGDMYLVSTKLGHPELQSWKYPLAGDKDVTMIERVIIDVPTASVV 271

Query: 253 ----------------IGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNAT 294
                           +     +    +++ + K    +        ++    D  + A 
Sbjct: 272 RLKLPPDQHRSTLCDDVSCSPGLWDDVKWAPDSKTLAFASTSRFHKQVWLRIADASTGAV 331

Query: 295 ERL------TNTLFINISASYS--PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                    T      ++A+++  P S++ V+ S+R    QLY+        KR     E
Sbjct: 332 RTAFDETAKTYYESGQVAANWAYLPGSNEAVWFSERSDWGQLYLYDLQTGKPKRAITSGE 391

Query: 347 ASYFD-PVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            +  +     P      F               +  +  DG    LL  ++   +   SP
Sbjct: 392 GNVTELLRVDPVSRTAWFVGVGKVPGVDPYYQQLWKVSLDGGAPVLLTPEAADHSIALSP 451

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            G   + +          +     +GR  + + T
Sbjct: 452 DGARFVDTYSTTLTPPVSVLRAAADGRTLSTVAT 485


>gi|85709124|ref|ZP_01040190.1| hypothetical protein NAP1_07775 [Erythrobacter sp. NAP1]
 gi|85690658|gb|EAQ30661.1| hypothetical protein NAP1_07775 [Erythrobacter sp. NAP1]
          Length = 329

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/262 (19%), Positives = 87/262 (33%), Gaps = 54/262 (20%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-------KRIGNFRSM 259
                +I   P F+P+   + +A  D E I     +  R  R P       +     R+ 
Sbjct: 42  LQQSGRITLSPAFTPDGNTIYFAQADCERIWNCPQLLMRSTRTPFGWSRPQEVTLPQRAR 101

Query: 260 ILAPRFSSNGKRALISVQKD----------EAMDIYSVDLQS-----------------N 292
           +  P  S +G+    S   +          E  D++ +DL                    
Sbjct: 102 VDWPSVSPDGRTLYFSWAPERERHEGENVYEDFDLFRLDLTDTDAVPQAIDDPDINRIRG 161

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGS---DQKRISQDKE 346
              R T  +    +   + D   + F S+R    G   +YV +SNGS   ++  I     
Sbjct: 162 GAIRKTRFVNNETAPVLTLDGD-LYFWSERLDGAGLRDIYVARSNGSGGFERPEILPAPI 220

Query: 347 ASYF--DPVW-SPQGDLIAFTKFSGEKFAIGVMKKDG------SQERLLVEDSNLQAPTW 397
            +    D  W S  G L+  T  +    A   +          S  R L    N +   +
Sbjct: 221 NNDGENDGSWVSADGRLMLLTTTARGSSAPANLHVSTLENGTWSTPRPLGRSVNTRFSEF 280

Query: 398 S----PSGRSLIFSRKKDGDTG 415
           +    P G++L+F+  +  D G
Sbjct: 281 AGRITPDGKTLVFTSDRPVDGG 302



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 59/210 (28%), Gaps = 33/210 (15%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--------SVDLQSNATERLT-NT 300
           P+ +     + L+P F+ +G     +    E +                 +  + +T   
Sbjct: 39  PEDLQQSGRITLSPAFTPDGNTIYFAQADCERIWNCPQLLMRSTRTPFGWSRPQEVTLPQ 98

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                  S SPD   + F    E +           D  R+      +    +  P  + 
Sbjct: 99  RARVDWPSVSPDGRTLYFSWAPERERHEGENVYEDFDLFRLDLTDTDAVPQAIDDPDINR 158

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           I                  G   R     +N  AP  +  G    +S + DG     +Y 
Sbjct: 159 I-----------------RGGAIRKTRFVNNETAPVLTLDGDLYFWSERLDGAGLRDIYV 201

Query: 421 I--DLNGRNETLINTPA-----YASDPQWV 443
              + +G  E     PA       +D  WV
Sbjct: 202 ARSNGSGGFERPEILPAPINNDGENDGSWV 231


>gi|325914552|ref|ZP_08176896.1| dipeptidyl-peptidase IV [Xanthomonas vesicatoria ATCC 35937]
 gi|325539322|gb|EGD10974.1| dipeptidyl-peptidase IV [Xanthomonas vesicatoria ATCC 35937]
          Length = 742

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 87/279 (31%), Gaps = 69/279 (24%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+ Q + +        L +Y +      A +++ +        + S  G        +
Sbjct: 116 WAPDAQALLFP---LGGELYLYDLHKTGVAAVRQLTHGEGFATDAKLSPKGGFVSFVRAR 172

Query: 279 DEAMDIYSVDLQSNATERLTNTLFI-----------------NISASYSPDSSQIVF--- 318
           +    ++ +DL S    +LT                      +    ++PD S I F   
Sbjct: 173 N----LWVIDLASGKQLQLTGDGSDTIGNGVAEFVADEEMDRHTGYWWAPDDSAIAFARI 228

Query: 319 --------------------ESDR---EGKEQL-----YVMQSNGSDQKRISQDKEASYF 350
                                S R    G+  +      +    GS  K I   K    +
Sbjct: 229 DESQVPVQKRPEVYADHTEVVSQRYPQAGQPNVAVQLGVIAPRAGSAPKWIDLGKHPDIY 288

Query: 351 --DPVWSPQGDLIAFTKFSGEKFAIGVMK---KDGSQERLLVEDSNLQAP-----TWSPS 400
                W      + F + S ++  + +++     G Q  L+ E S    P      +   
Sbjct: 289 LARVDW-RDAQRLTFQRQSRDQKTLELIETTLASGKQRTLITETSPTWVPLTNDLRFLKD 347

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           GR + ++ ++ G     LY    +G   T + + A+  D
Sbjct: 348 GRFV-WNSERSG--YEHLYVASEDGATLTPLTSGAWVVD 383



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/332 (15%), Positives = 97/332 (29%), Gaps = 66/332 (19%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQI- 213
           H       + +T  +G      L      VS +   +L V+D   G  ++      D I 
Sbjct: 137 HKTGVAAVRQLTHGEGFATDAKLSPKGGFVSFVRARNLWVIDLASGKQLQLTGDGSDTIG 196

Query: 214 --------------LFEPRFSPNQQKVAYATYDDEDIL-----RVYLMDTRIDRAPKRIG 254
                              ++P+   +A+A  D+  +       VY   T +        
Sbjct: 197 NGVAEFVADEEMDRHTGYWWAPDDSAIAFARIDESQVPVQKRPEVYADHTEVVSQRYPQA 256

Query: 255 NFRSMI-----------LAPRF-----SSN----------GKRALISVQKDEAMDIYSVD 288
              ++             AP++       +           +R     Q  +   +  ++
Sbjct: 257 GQPNVAVQLGVIAPRAGSAPKWIDLGKHPDIYLARVDWRDAQRLTFQRQSRDQKTLELIE 316

Query: 289 --LQSNATERLTNTLFINISASYSP---------DSSQIVFESDREGKEQLYVMQSNGSD 337
             L S     L        S ++ P         D  + V+ S+R G E LYV   +G+ 
Sbjct: 317 TTLASGKQRTLIT----ETSPTWVPLTNDLRFLKDG-RFVWNSERSGYEHLYVASEDGAT 371

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              ++              Q  L+ F  +K S  +  I  +   G             A 
Sbjct: 372 LTPLTSGAWVVDALLAVDEQAGLVYFSGSKDSPTQTHIYAVPLAGGAIEKRSASRGTHAA 431

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           +++ +  S+      +  T  ++     NG  
Sbjct: 432 SFA-NNASVYVDTWSNTTTPPQIELFRANGEK 462



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 72/220 (32%), Gaps = 42/220 (19%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P     L +P+ +P+  +V++    D D  ++ L +  I     R+     ++L     
Sbjct: 32  LPLSGPTLMKPKVAPDGSRVSFLRGKDSDRNQLDLWEYDIASGQTRLLVDSKVVL----- 86

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                            +  V+      +R+     I +   ++PD+  ++F     G+ 
Sbjct: 87  ------------PGTETLSDVEKARRERQRIAALTGI-VDYQWAPDAQALLFPL--GGEL 131

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            LY +   G    R     E    D   SP+G  ++F +       + V+     ++  L
Sbjct: 132 YLYDLHKTGVAAVRQLTHGEGFATDAKLSPKGGFVSFVRAR----NLWVIDLASGKQLQL 187

Query: 387 VEDS------------------NLQAPTWSPSGRSLIFSR 408
             D                         W+P   ++ F+R
Sbjct: 188 TGDGSDTIGNGVAEFVADEEMDRHTGYWWAPDDSAIAFAR 227


>gi|332089326|gb|EGI94430.1| hypothetical protein SB359474_4272 [Shigella boydii 3594-74]
          Length = 356

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 206 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 265

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 266 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 321

Query: 389 D----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 322 SHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 355



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 244 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 303

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT +     SA    +SPD   + +    EG  QL++ +++
Sbjct: 304 N----RIACAHAQSGEVEYLTESHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 355



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +    D 
Sbjct: 250 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 304

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 305 RIACAHAQSGEVEYLTESHANPPSAD-AVVFSPDGQWLAW 343


>gi|254038907|ref|ZP_04872959.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|300947551|ref|ZP_07161727.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|300956306|ref|ZP_07168607.1| hypothetical protein HMPREF9547_02137 [Escherichia coli MS 175-1]
 gi|301644361|ref|ZP_07244362.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|331644413|ref|ZP_08345542.1| conserved hypothetical protein [Escherichia coli H736]
 gi|226838872|gb|EEH70899.1| conserved hypothetical protein [Escherichia sp. 1_1_43]
 gi|300316869|gb|EFJ66653.1| hypothetical protein HMPREF9547_02137 [Escherichia coli MS 175-1]
 gi|300452852|gb|EFK16472.1| conserved hypothetical protein [Escherichia coli MS 116-1]
 gi|301077302|gb|EFK92108.1| conserved hypothetical protein [Escherichia coli MS 146-1]
 gi|331036707|gb|EGI08933.1| conserved hypothetical protein [Escherichia coli H736]
          Length = 416

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 57/161 (35%), Gaps = 26/161 (16%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 DSNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +  +P+     +SP G+ L +        G +L+  + +
Sbjct: 382 -HHANSPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT     + SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTEHHANSPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +    D 
Sbjct: 310 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 364

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 365 RIACAHAQSGEVEYLTEHHANSPSAD-AVVFSPDGQWLAW 403


>gi|294629844|ref|ZP_06708404.1| protease [Streptomyces sp. e14]
 gi|292833177|gb|EFF91526.1| protease [Streptomyces sp. e14]
          Length = 1265

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 82/271 (30%), Gaps = 32/271 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +   DGA+  +           PRFSP+ + +AY T+       ++L+        +
Sbjct: 8   DLWLAPLDGADRAWRLTVDRTKTGHPRFSPDGRHIAYTTWR-SLAPEIHLVPVDGGPGRQ 66

Query: 252 RIGNFRSMILAPRFSS---NGKRALISVQKDEAM-----DIYSVDLQSNATERLTNTLFI 303
                 S      +S     G   +++V             Y V    +   +L      
Sbjct: 67  LTYWGSSDTRVCGWSPPDEIGNTEILAVTSQGEPFSYFTWAYKVATDGSPGRKLPWGPVS 126

Query: 304 NISASYSPDS--SQIVFESDREGKEQLYVMQSNGSDQK------RISQDKEASYFDPVWS 355
           ++ A+   D     ++       +   +     G+  +      R+  D       P++ 
Sbjct: 127 DLQAA-DVDGERKSLLLTGTPPHEPASWKRYRGGATGRLWLHGQRLLPDLGGHLACPMFV 185

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             G  IAF         +     DGS  R   +     A   +  G  +++         
Sbjct: 186 --GGRIAFLSDHEGVGNLYSCACDGSDLRRHTDHDAFYARHAASDGSRVVY------QCA 237

Query: 416 SKLYSID---LNGRNETL---INTPAYASDP 440
            +L+ +D    +     L   ++ P     P
Sbjct: 238 GELWLVDDLAADSEPRRLEVRLSGPRAGRRP 268



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 60/148 (40%), Gaps = 32/148 (21%)

Query: 326 EQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + L++   +G+D+  R++ D+  +   P +SP G  IA+T +      I ++  DG   R
Sbjct: 7   DDLWLAPLDGADRAWRLTVDRTKT-GHPRFSPDGRHIAYTTWRSLAPEIHLVPVDGGPGR 65

Query: 385 LLV--EDSNLQAPTWSP-----SGRSLIFSRK--------------KDGDTG-------- 415
            L     S+ +   WSP     +   L  + +               DG  G        
Sbjct: 66  QLTYWGSSDTRVCGWSPPDEIGNTEILAVTSQGEPFSYFTWAYKVATDGSPGRKLPWGPV 125

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQ-W 442
           S L + D++G  ++L+ T     +P  W
Sbjct: 126 SDLQAADVDGERKSLLLTGTPPHEPASW 153



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 40/115 (34%), Gaps = 8/115 (6%)

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQERLLVE 388
             G     + +       D  +SP G  + ++      S  +  +  +K D +   +   
Sbjct: 557 PPGGLVTELVRSGNGPVRDLAFSPDGAWVTWSHPGIGRSLRQIKMARIK-DRTVIDVTDG 615

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
               + P ++  GR L F   +  D    +++ DL+   G    L+   +    P
Sbjct: 616 RFEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCKPYLVPLSSATPSP 670



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 25/79 (31%), Gaps = 2/79 (2%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFIN 304
               + + +    +    FS +G     S          I    ++      +T+  F +
Sbjct: 560 GLVTELVRSGNGPVRDLAFSPDGAWVTWSHPGIGRSLRQIKMARIKDRTVIDVTDGRFED 619

Query: 305 ISASYSPDSSQIVFESDRE 323
            +  ++ D   + F S R 
Sbjct: 620 ENPVFTRDGRYLAFLSWRG 638



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 32/95 (33%), Gaps = 3/95 (3%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +  L  S +  + +  FSP+   V ++       LR   M    DR    + + R  
Sbjct: 559 GGLVTELVRSGNGPVRDLAFSPDGAWVTWSHPGIGRSLRQIKMARIKDRTVIDVTDGRFE 618

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              P F+ +G+       +         D+ +   
Sbjct: 619 DENPVFTRDGRYLAFLSWRGFDP---VYDVHTGDL 650


>gi|293417168|ref|ZP_06659795.1| yidR protein [Escherichia coli B185]
 gi|291431199|gb|EFF04192.1| yidR protein [Escherichia coli B185]
          Length = 416

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 73/203 (35%), Gaps = 41/203 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA----LISVQKDEAMDIYSVDL-------------QSNATE 295
           +GN     +    S  G++     ++ + KDEA    + D              +     
Sbjct: 223 VGNHALAFIGDTLSPKGEKVPELFIVELPKDEAGWKAAGDAPLSGTETTLPAPPRGVVQR 282

Query: 296 RLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT  +        N+   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 283 RLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 342

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I     +  +   L E      +  A  +SP G
Sbjct: 343 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAESGEVEYLTENHANPPSADAVVFSPDG 398

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN 424
           + L +        G +L+  + +
Sbjct: 399 QWLAWME------GGQLWITETD 415



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     +S   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAESGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAESG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 403



 Score = 37.3 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 54/152 (35%), Gaps = 32/152 (21%)

Query: 290 QSNATERLT----NTLFINISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRI 341
           Q  A +++T    N L  N + +++PDS  +VF+    G     E +  +  +  + + I
Sbjct: 9   QDRAMKQITFAPRNHLLTNTN-TWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVI 67

Query: 342 SQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMK--------KDGSQERLLVEDSNL 392
            +  + ++   V   P+ +   F                       +G +   L +  ++
Sbjct: 68  YRASQGAHVGVVTVHPKSEKYVFIHGPENPDETWYYDFHHRRGVIAEGGKVSNL-DAMDI 126

Query: 393 QAP-------------TWSPSGRSLIFSRKKD 411
            AP              +SP+G  + F+    
Sbjct: 127 TAPYTPGALRGGSHVHVFSPNGEMVSFTYNDH 158


>gi|261191210|ref|XP_002622013.1| WD domain-containing protein [Ajellomyces dermatitidis SLH14081]
 gi|239589779|gb|EEQ72422.1| WD domain-containing protein [Ajellomyces dermatitidis SLH14081]
          Length = 1561

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 93/276 (33%), Gaps = 43/276 (15%)

Query: 171  GDFNSRILFVSESVVSGIIKNSLCVMDRDG--------------------ANIRYLTPSR 210
            G F S    VS+S  +G  K     +  DG                    A I       
Sbjct: 992  GAFRSAFPDVSQSYFAGGTKKRKVALSPDGKFLASTSAFDDKIRIWDSKRAVIHSTLEGH 1051

Query: 211  DQILFEPRFSPNQQKVAYATYDD---------EDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               +    FSP+ + +A  + D               ++  ++ +     +  +F ++  
Sbjct: 1052 VGRVSWIAFSPDGEYIASTSVDKSMRLWEVKSGHSKILFREESNLSFEKAQAFSFETLGN 1111

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFES 320
               FS NG+         +   +   D ++N +   LT++  I     +S D + I   S
Sbjct: 1112 RITFSPNGEFIAGYRDDHDDHQVRLWDAKTNCSLGTLTHSHCILT-LEFSHDGNCIA-SS 1169

Query: 321  DREGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGVMK 377
              +G  +++  ++        ++     +      +SP G  IA  +  S E + +  + 
Sbjct: 1170 SLDGAVRIWDPRTATLCGILTQVRSGYPSWMSPFAFSPDGQSIACISHGSIEVWDVKTLS 1229

Query: 378  KDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              GS     +++          +SP  + L+ +  +
Sbjct: 1230 LYGSIGDNTQVVTT-----CMAFSPDSKLLVTASGR 1260



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 50/256 (19%), Positives = 88/256 (34%), Gaps = 47/256 (18%)

Query: 204  RYLTPSRDQILFEP--------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            R++   R  I   P         FSP +  +    +D        ++    D +P  +  
Sbjct: 899  RFILNFRSAIEISPLQIYSSALVFSPKKSIIRQQFWDHLPPWITDVVSGEEDWSPSLLTL 958

Query: 256  FRSMILAPRF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY----- 309
              S  +   F S +G + LIS   D A    ++   + A      + F ++S SY     
Sbjct: 959  EHSRAIDELFFSPDG-QLLISSDIDTAKAWDTM---TGAFR----SAFPDVSQSYFAGGT 1010

Query: 310  -------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                   SPD   +   S  +  +++ +  S  +      +          +SP G+ IA
Sbjct: 1011 KKRKVALSPDGKFLASTSAFD--DKIRIWDSKRAVIHSTLEGHVGRVSWIAFSPDGEYIA 1068

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--------------TWSPSGRSLIFSR 408
             T    +   +  +K  G  + L  E+SNL                 T+SP+G  +   R
Sbjct: 1069 STSVD-KSMRLWEVK-SGHSKILFREESNLSFEKAQAFSFETLGNRITFSPNGEFIAGYR 1126

Query: 409  KKDGDTGSKLYSIDLN 424
                D   +L+    N
Sbjct: 1127 DDHDDHQVRLWDAKTN 1142



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 80/231 (34%), Gaps = 28/231 (12%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWR-KIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
              RLW+VK       K  F   ++   + A   S +      G +  F+    F++    
Sbjct: 1075 SMRLWEVKSG---HSKILFREESNLSFEKAQAFSFETL----GNRITFSPNGEFIAGYR- 1126

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                 + + + D    N    T +    +    FS +   +A ++ D    +R++   T 
Sbjct: 1127 DDHDDHQVRLWDAK-TNCSLGTLTHSHCILTLEFSHDGNCIASSSLD--GAVRIWDPRTA 1183

Query: 246  I--DRAPKRIGNFRSMILAPRFSSNGKRAL-ISVQKDEAMDIYSVDLQSN---ATERLTN 299
                   +    + S +    FS +G+    IS    E  D+ ++ L  +    T+ +T 
Sbjct: 1184 TLCGILTQVRSGYPSWMSPFAFSPDGQSIACISHGSIEVWDVKTLSLYGSIGDNTQVVTT 1243

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             +       +SPDS  +V  S R     L +        + I     ++  
Sbjct: 1244 CMA------FSPDSKLLVTASGR----YLKLWDPQTKTLRGILAGHTSNDT 1284


>gi|188493242|ref|ZP_03000512.1| conserved hypothetical protein [Escherichia coli 53638]
 gi|188488441|gb|EDU63544.1| conserved hypothetical protein [Escherichia coli 53638]
          Length = 404

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 57/161 (35%), Gaps = 26/161 (16%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 DSNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +  +P+     +SP G+ L +        G +L+  + +
Sbjct: 370 -HHANSPSADAVVFSPDGQWLAWME------GGQLWITETD 403



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT     + SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTEHHANSPSADAVVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 305 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 363 EVEYLTEHHANSPSAD-AVVFSPDGQWLAW 391


>gi|169784564|ref|XP_001826743.1| F-box and wd40 domain protein [Aspergillus oryzae RIB40]
 gi|83775490|dbj|BAE65610.1| unnamed protein product [Aspergillus oryzae]
          Length = 414

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 79/246 (32%), Gaps = 39/246 (15%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRF 265
               I   P  SP+ + VA    +     ++ + D     + + + + +   S+  AP  
Sbjct: 48  GLGGIASTPTLSPDDKLVAVGVNE-----KILVFDVATQASLEVLTDEKRVESVQFAPGV 102

Query: 266 --SSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISA---SYSPDSS 314
             S +GK A   +      D      I+ +D +       T    +       S+SPD  
Sbjct: 103 VDSRDGKHARYLLASQGGSDENPQVIIWELDEKGKLVT--TTEPRLVFEGELGSFSPDGK 160

Query: 315 QIVFESDREGKEQ----------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +VF S  E  ++          + +        +               SP   L+A  
Sbjct: 161 TLVFFSQNETTQEESREAAALPCINLWNIETQSFRHHLLGHTDRIMWAAMSPDNKLVASV 220

Query: 365 KFSGEKFAIGVMKK-DGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            + G      V     GS   +L      L +  +SP    L FS    GD  + ++  D
Sbjct: 221 AWDG---IARVWDAWSGSCLHVLGPMGGQLWSGAFSPDQEFLAFS---QGDPRTYIHVYD 274

Query: 423 LNGRNE 428
           +    +
Sbjct: 275 IATGKQ 280



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 71/209 (33%), Gaps = 20/209 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + + +  + R+        +     SP+ + VA   +D   I RV+  D         
Sbjct: 184 INLWNIETQSFRHHLLGHTDRIMWAAMSPDNKLVASVAWD--GIARVW--DAWSGSCLHV 239

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSP 311
           +G     + +  FS + +    S Q D    I+  D+ +       + L +   S S+  
Sbjct: 240 LGPMGGQLWSGAFSPDQEFLAFS-QGDPRTYIHVYDIATGKQVSRFDKLHMATRSLSWRH 298

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKR---ISQD-----KEASYFDPVWSPQGDLIAF 363
           D + +   +D      L +      +++    ++ D     + A+     +   G  + F
Sbjct: 299 DGTMLACGAD---DGTLCIWDPYTGEERMRWCLAFDDFLMCRFANTRAVQFVDGGKKLVF 355

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
               G    + V   + + ++      + 
Sbjct: 356 QIREGT---VEVYDFERNLKQQFTRGVDD 381


>gi|322435830|ref|YP_004218042.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
 gi|321163557|gb|ADW69262.1| WD40-like beta Propeller containing protein [Acidobacterium sp.
           MP5ACTX9]
          Length = 759

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 58/369 (15%), Positives = 114/369 (30%), Gaps = 116/369 (31%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANI-----RYLTPSRDQILFEPRFSPNQQKVAY 228
           +  + FV  +V          +   D A       R    +RDQ    PR+SP+ +++A+
Sbjct: 43  SPTVAFVQTTVSPDHSGYETALYTLDTATPNATPHRVTLGTRDQ---SPRWSPDGKQLAF 99

Query: 229 ATYDDED----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE---- 280
               ++D      ++YL+     ++P ++ +      AP+++ +G    +     +    
Sbjct: 100 IRSVEKDGHPTPPQLYLVSATSPQSPIKLTDLPKGASAPQWAPSGTAIAVESSTPQDQAK 159

Query: 281 ------------------------AMDIYSVDLQSN----------------------AT 294
                                     ++Y ++ + N                      A 
Sbjct: 160 ARLEATKKSRATGDEAHVSDIRIVNREVYRLNGEGNLDPTFVPQLYLVSLPKADGTQEAP 219

Query: 295 ERLTNTLFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKR------ 340
            +LT   F     ++ P S+ I + S        D      LY ++++ S   +      
Sbjct: 220 WQLTGGRFGVEEYTWRPGSNWIFYTSTHEDEPYYDATEHNTLYGIEASQSTHPQAQPPAA 279

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTK----------FSGEKFAIGVMKKD--------GSQ 382
           ++ +          SP G  +AF             S ++  + V+              
Sbjct: 280 LTAELPLEAHGLALSPDGAHLAFHAEAFPIPPAKPVSHQQSDLFVLDLAWKKNAPTVAGA 339

Query: 383 ERLLV----------EDSNLQAP--------TWSPSGRSLIFSRKKDGDTGSK-LYSIDL 423
            R L              +  AP        TW+P    L+      G+ GS  L SID 
Sbjct: 340 PRNLTVSKGYEMGSGVGGDNTAPRGGGRPAITWTPDSTHLL---DVAGNLGSALLMSIDA 396

Query: 424 NGRNETLIN 432
              + T + 
Sbjct: 397 TTGDMTRLT 405



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 86/242 (35%), Gaps = 29/242 (11%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI------DRAPKRIGNFRSMILAPRFSSNGKRAL 273
           SP    VA+           Y            +  P R+    +   +PR+S +GK+  
Sbjct: 40  SPTSPTVAFVQTTVSPDHSGYETALYTLDTATPNATPHRVT-LGTRDQSPRWSPDGKQLA 98

Query: 274 I--SVQKDEA---MDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD-----R 322
              SV+KD       +Y V   S  +  +LT+      +  ++P  + I  ES       
Sbjct: 99  FIRSVEKDGHPTPPQLYLVSATSPQSPIKLTDLPKGASAPQWAPSGTAIAVESSTPQDQA 158

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           + + +         D+  +S  +  +      + +G+L     F  + + + + K DG+Q
Sbjct: 159 KARLEATKKSRATGDEAHVSDIRIVNREVYRLNGEGNL--DPTFVPQLYLVSLPKADGTQ 216

Query: 383 E---RLLVEDSNLQAPTWSPSGRSLIFSR------KKDGDTGSKLYSIDLNGRNETLINT 433
           E   +L      ++  TW P    + ++         D    + LY I+ +         
Sbjct: 217 EAPWQLTGGRFGVEEYTWRPGSNWIFYTSTHEDEPYYDATEHNTLYGIEASQSTHPQAQP 276

Query: 434 PA 435
           PA
Sbjct: 277 PA 278



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 13/103 (12%)

Query: 355 SPQGDLIAFT----KFSGEKFAIGVMKKDGSQER----LLVEDSNLQAPTWSPSGRSLIF 406
           SP    +AF           +   +   D +        +   +  Q+P WSP G+ L F
Sbjct: 40  SPTSPTVAFVQTTVSPDHSGYETALYTLDTATPNATPHRVTLGTRDQSPRWSPDGKQLAF 99

Query: 407 SRKKDGD---TGSKLYSIDLNG--RNETLINTPAYASDPQWVG 444
            R  + D   T  +LY +          L + P  AS PQW  
Sbjct: 100 IRSVEKDGHPTPPQLYLVSATSPQSPIKLTDLPKGASAPQWAP 142



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 70/229 (30%), Gaps = 54/229 (23%)

Query: 198 RDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMDTRIDRAPKRIGN 255
            DG     +        + E  + P    + Y + ++DE        +T       +  +
Sbjct: 212 ADGTQEAPWQLTGGRFGVEEYTWRPGSNWIFYTSTHEDEPYYDATEHNTLYGIEASQSTH 271

Query: 256 FRSMILAP------------RFSSNGKRALISVQK----------DEAMDIYSVDLQ--- 290
            ++   A               S +G       +            +  D++ +DL    
Sbjct: 272 PQAQPPAALTAELPLEAHGLALSPDGAHLAFHAEAFPIPPAKPVSHQQSDLFVLDLAWKK 331

Query: 291 -----SNATERLTNTLFI---------NISA--------SYSPDSSQIVFESDREGKEQL 328
                + A   LT +            N +         +++PDS+ ++  +   G   L
Sbjct: 332 NAPTVAGAPRNLTVSKGYEMGSGVGGDNTAPRGGGRPAITWTPDSTHLLDVAGNLGSALL 391

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIG 374
             + +   D  R++  K+A       S   DLIA        G+ + IG
Sbjct: 392 MSIDATTGDMTRLTARKQAVLNFTANS--KDLIALVSNPIVIGDLYRIG 438


>gi|86741596|ref|YP_481996.1| peptidase S9, prolyl oligopeptidase active site region [Frankia sp.
           CcI3]
 gi|86568458|gb|ABD12267.1| peptidase S9, prolyl oligopeptidase active site region [Frankia sp.
           CcI3]
          Length = 735

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 13/132 (9%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S  P   ++ F  DR G   L++   +G +  R            +WSP  D IA    
Sbjct: 47  PSTGPHG-RLAFVGDRGGAPALWIRDPDGRE--RPVDTGPGHVRAVLWSPTDDRIAVHVA 103

Query: 367 SGEK--FAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFS----RKKDGDTGSKL 418
            G      +  ++ DG   R L       A    W+  G  L+ +        G T + L
Sbjct: 104 PGGGELTEVRTVRADGGDLRHLAGGGRRAATPARWTDDGHGLVVTESDRSDPSGRTAAVL 163

Query: 419 YSIDLNGRNETL 430
             ID +GR   L
Sbjct: 164 --IDSDGRRTRL 173



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 36/122 (29%), Gaps = 10/122 (8%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--M 282
           ++A+            L     D   + +      + A  +S    R  + V        
Sbjct: 54  RLAFVGDRGGAPA---LWIRDPDGRERPVDTGPGHVRAVLWSPTDDRIAVHVAPGGGELT 110

Query: 283 DIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE----SDREGKEQLYVMQSNGSD 337
           ++ +V         L        +   ++ D   +V      SD  G+    ++ S+G  
Sbjct: 111 EVRTVRADGGDLRHLAGGGRRAATPARWTDDGHGLVVTESDRSDPSGRTAAVLIDSDGRR 170

Query: 338 QK 339
            +
Sbjct: 171 TR 172



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 39/98 (39%), Gaps = 3/98 (3%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           AS   P   P G  +AF    G   A+ +   DG +  +     +++A  WSP+   +  
Sbjct: 42  ASCRAPSTGPHGR-LAFVGDRGGAPALWIRDPDGRERPVDTGPGHVRAVLWSPTDDRIAV 100

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQ-W 442
                G   +++ ++  +G +   +      A+ P  W
Sbjct: 101 HVAPGGGELTEVRTVRADGGDLRHLAGGGRRAATPARW 138



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 17/128 (13%), Positives = 36/128 (28%), Gaps = 13/128 (10%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + R+ FV +   +      L + D DG        P   + +    +SP   ++A     
Sbjct: 52  HGRLAFVGDRGGAPA----LWIRDPDGRERPVDTGPGHVRAVL---WSPTDDRIAVHVAP 104

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALIS----VQKDEAMDIYSV 287
               L             + +         P R++ +G   +++               +
Sbjct: 105 GGGELTEVRTVRADGGDLRHLAGGGRRAATPARWTDDGHGLVVTESDRSDPSGRTAAVLI 164

Query: 288 DLQSNATE 295
           D     T 
Sbjct: 165 DSDGRRTR 172


>gi|227355119|ref|ZP_03839530.1| cytoplasmic protein [Proteus mirabilis ATCC 29906]
 gi|227164906|gb|EEI49753.1| cytoplasmic protein [Proteus mirabilis ATCC 29906]
          Length = 428

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 61/174 (35%), Gaps = 27/174 (15%)

Query: 267 SNGKRALISVQKD----EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDS 313
            +      S++ D              Q     RLTNT       +      +   SP  
Sbjct: 259 PDDDH-AFSLEGDKPLAGTETTMPAPAQGIEQIRLTNTHHRKYPGVLNQPRHWLRSSPQG 317

Query: 314 SQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             I F   D +G  QLY +       ++++  +        WS  G+ + F   +    +
Sbjct: 318 DAIAFLMKDDDGVVQLYTVSPTTKAIRQVTSQQWDIQSAFTWSYSGEYLTFICDN----S 373

Query: 373 IGVMKKDGSQERLLVEDSNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +      +   L  D   QAP+     +SP+ + + F R  DG    +++++
Sbjct: 374 VMLCNAKTGELTRLT-DKTAQAPSGDAVVFSPNDQYIAFMRDIDGYR--QIFTV 424



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 21/210 (10%)

Query: 139 IIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDF-----NSRILFVSESVVSGIIKNS 192
           I  + +  +  +  R     I D + +S       F     +    F  E         +
Sbjct: 219 IGKQGYTKADGSQQRWAIAFIGDTVSESGEKVADIFLVDLPDDDHAFSLEGDKPLAGTET 278

Query: 193 LCVMDRDGANIRYLTPSRD----QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDT 244
                  G     LT +       +L +PR     SP    +A+   DD+ ++++Y +  
Sbjct: 279 TMPAPAQGIEQIRLTNTHHRKYPGVLNQPRHWLRSSPQGDAIAFLMKDDDGVVQLYTVSP 338

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +       +  A  +S +G+             +   + ++    RLT+     
Sbjct: 339 TTKAIRQVTSQQWDIQSAFTWSYSGEYLTFICDNS----VMLCNAKTGELTRLTDKTAQA 394

Query: 305 ISA---SYSPDSSQIVFESDREGKEQLYVM 331
            S     +SP+   I F  D +G  Q++ +
Sbjct: 395 PSGDAVVFSPNDQYIAFMRDIDGYRQIFTV 424


>gi|197104430|ref|YP_002129807.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Phenylobacterium
           zucineum HLK1]
 gi|196477850|gb|ACG77378.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Phenylobacterium
           zucineum HLK1]
          Length = 644

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 53/318 (16%), Positives = 111/318 (34%), Gaps = 66/318 (20%)

Query: 124 LRVEFRLWD--VKDRKQIIGKKFFSSPASWRKIA-------HTISDDIYQSITGEKGDFN 174
               + +++  + D   +I  +F  +    R  A        T +D+   +   + G   
Sbjct: 52  YDARYAVFEDWLPDGSILIATRFGETNQIHRVKAPGAARTQLTFADEPINAAIVQPG--T 109

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R L+     V G       + D  G  +R   P      F   FS + + VA++  +  
Sbjct: 110 ERFLYP--RDVGGAEYYQAWLRDLSGNEVRLTAPDTRNQSFV--FSKDGRLVAWSQVNRG 165

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEA-MDIYSVDLQSN 292
           D     ++    + A +R+ +     LAP   S++G+  L+S     A ++++ +D+++ 
Sbjct: 166 DPNYDIMVADPANPAGRRLVHDGVGALAPQDVSADGRHLLVSRYNSAAHVELFVLDVETG 225

Query: 293 ATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                         A   P   +I +   +  +G   + V+  +GS+  R          
Sbjct: 226 KI------------APVGPTGRKIAYAGGAFVDGGRSVIVLSDDGSEVTRPV-------- 265

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSR 408
                                   V+     + R L   +    +    SP GR++ ++ 
Sbjct: 266 ------------------------VIDIATGKVRDLDSGAKWGAEEMDVSPDGRTIAYAV 301

Query: 409 KKDGDTGSKLYSIDLNGR 426
            ++G +   L  I  +GR
Sbjct: 302 NEEGYSKVVLRDI-ASGR 318



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 71/218 (32%), Gaps = 20/218 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+   +    + + + +           A  ++      I A       +R L     
Sbjct: 62  WLPDGSILIATRFGETNQIHRVK---APGAARTQLTFADEPINAAIVQPGTERFLYPRDV 118

Query: 279 DEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             A     +  DL S    RLT     N S  +S D   + +     G     +M ++ +
Sbjct: 119 GGAEYYQAWLRDL-SGNEVRLTAPDTRNQSFVFSKDGRLVAWSQVNRGDPNYDIMVADPA 177

Query: 337 DQ--KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQ 393
           +   +R+  D   +      S  G  +  ++++      + V+  +  +           
Sbjct: 178 NPAGRRLVHDGVGALAPQDVSADGRHLLVSRYNSAAHVELFVLDVETGKI---------- 227

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           AP   P+GR + ++     D G  +  +  +G   T  
Sbjct: 228 APV-GPTGRKIAYAGGAFVDGGRSVIVLSDDGSEVTRP 264



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 55/136 (40%), Gaps = 5/136 (3%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + PD S ++         Q++ +++ G+ + +++   E      +  P  +   + +  G
Sbjct: 62  WLPDGSILIATRF-GETNQIHRVKAPGAARTQLTFADE-PINAAIVQPGTERFLYPRDVG 119

Query: 369 EK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNG 425
               +   +    G++ RL   D+  Q+  +S  GR + +S+   GD    +   D  N 
Sbjct: 120 GAEYYQAWLRDLSGNEVRLTAPDTRNQSFVFSKDGRLVAWSQVNRGDPNYDIMVADPANP 179

Query: 426 RNETLINTPAYASDPQ 441
               L++    A  PQ
Sbjct: 180 AGRRLVHDGVGALAPQ 195



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 63/211 (29%), Gaps = 4/211 (1%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V  G     + V D      R L       L     S + + +  + Y+    + ++++
Sbjct: 161 QVNRGDPNYDIMVADPANPAGRRLVHDGVGALAPQDVSADGRHLLVSRYNSAAHVELFVL 220

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNT 300
           D    +        R +  A     +G R++I +  D +       +D+ +     L + 
Sbjct: 221 DVETGKIAPVGPTGRKIAYAGGAFVDGGRSVIVLSDDGSEVTRPVVIDIATGKVRDLDSG 280

Query: 301 LFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG- 358
                     SPD   I +  + EG  ++ +       +    +          +SP G 
Sbjct: 281 AKWGAEEMDVSPDGRTIAYAVNEEGYSKVVLRDIASGRELPGPKLPLGVLTALKFSPDGS 340

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            L      S     +   +  G       + 
Sbjct: 341 RLGLSLSTSTSSGDVWSYELAGGTLVRWTQS 371



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 57/168 (33%), Gaps = 12/168 (7%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSR 210
           R++ H    D   ++  +    + R L VS    +  +   L V+D   G         R
Sbjct: 182 RRLVH----DGVGALAPQDVSADGRHLLVSRYNSAAHV--ELFVLDVETGKIAPVGPTGR 235

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
                   F    + V   + D  ++ R  ++D    +        +        S +G+
Sbjct: 236 KIAYAGGAFVDGGRSVIVLSDDGSEVTRPVVIDIATGKVRDLDSGAKWGAEEMDVSPDGR 295

Query: 271 RALISVQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQ 315
               +V ++    +   D+ S       +L   L +  +  +SPD S+
Sbjct: 296 TIAYAVNEEGYSKVVLRDIASGRELPGPKL--PLGVLTALKFSPDGSR 341


>gi|308209622|ref|NP_418144.3| conserved protein [Escherichia coli str. K-12 substr. MG1655]
 gi|313104291|sp|P31455|YIDR_ECOLI RecName: Full=Uncharacterized protein YidR
 gi|308199520|gb|AAC76712.3| conserved protein [Escherichia coli str. K-12 substr. MG1655]
          Length = 415

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 57/161 (35%), Gaps = 26/161 (16%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 265 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 324

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 325 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 380

Query: 389 DSNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +  +P+     +SP G+ L +        G +L+  + +
Sbjct: 381 -HHANSPSADAVVFSPDGQWLAWME------GGQLWITETD 414



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 303 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 362

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT     + SA    +SPD   + +    EG  QL++ +++
Sbjct: 363 N----RIACAHAQSGEVEYLTEHHANSPSADAVVFSPDGQWLAW---MEGG-QLWITETD 414



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 316 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 373

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 374 EVEYLTEHHANSPSAD-AVVFSPDGQWLAW 402


>gi|312130253|ref|YP_003997593.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311906799|gb|ADQ17240.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 657

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 57/162 (35%), Gaps = 31/162 (19%)

Query: 199 DGANIRYLTPSR-----DQILFEPRFSPNQQKVAYATYDDED----------ILRVYLMD 243
           DG   +    S      D+    P FSP+ + + +A  +              +  Y+  
Sbjct: 201 DGKVGQTELFSSSIFADDRNEGSPAFSPDGKMMVFARGNSGKRKDLSPDVDLYMSRYVSG 260

Query: 244 TRIDRAPKRIGNFRSMIL--APRFSSNGKRALISVQK---DEAMDIYSVDLQSN------ 292
           T     P RI    S+     P FSS+GK    S  +      +DIY V+L ++      
Sbjct: 261 TGWT-EPTRITASDSLAYDGCPAFSSDGKTLYFSSNRAGGSGGLDIYRVNLDASGRFGNP 319

Query: 293 -ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
               +  NT    +    S D  ++ F SD  G   L  +  
Sbjct: 320 VNMGKAINTAGDEMFPFVSTDG-KLYFASD--GHPGLGKLDL 358



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 45/129 (34%), Gaps = 20/129 (15%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQ---------SN--ATERLT--NTLFINI 305
              +P FS +GK  + +          S D+          +      R+T  ++L  + 
Sbjct: 220 NEGSPAFSPDGKMMVFARGNSGKRKDLSPDVDLYMSRYVSGTGWTEPTRITASDSLAYDG 279

Query: 306 SASYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             ++S D   + F S+R G      +Y +  + S +         +    + +   ++  
Sbjct: 280 CPAFSSDGKTLYFSSNRAGGSGGLDIYRVNLDASGR----FGNPVNMGKAINTAGDEMFP 335

Query: 363 FTKFSGEKF 371
           F    G+ +
Sbjct: 336 FVSTDGKLY 344



 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 49/152 (32%), Gaps = 25/152 (16%)

Query: 303 INISASYSPDSSQIVFESDREGKEQL-----------YVMQSNGSDQKRIS-QDKEASYF 350
              S ++SPD   +VF     GK +            YV  +  ++  RI+  D  A   
Sbjct: 220 NEGSPAFSPDGKMMVFARGNSGKRKDLSPDVDLYMSRYVSGTGWTEPTRITASDSLAYDG 279

Query: 351 DPVWSPQGDLIAFTKFS---GEKFAIGVMKKDGSQE--------RLLVEDSNLQAPTWSP 399
            P +S  G  + F+           I  +  D S          + +    +   P  S 
Sbjct: 280 CPAFSSDGKTLYFSSNRAGGSGGLDIYRVNLDASGRFGNPVNMGKAINTAGDEMFPFVST 339

Query: 400 SGRSLIFSRK-KDGDTGSKLYSIDLNGRNETL 430
            G+ L F+     G     L+     G   T+
Sbjct: 340 DGK-LYFASDGHPGLGKLDLFRAVRTGGKITV 370



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 37/164 (22%)

Query: 314 SQIVFESDRE-----------GKEQLYVMQSNGSDQKRIS---QDKEASYFDPVWSPQGD 359
             +VF + R+           G  +  +        +  S      + +   P +SP G 
Sbjct: 172 GHLVFTASRKTKIYSNDLPFLGIYKAKITDGKVGQTELFSSSIFADDRNEGSPAFSPDGK 231

Query: 360 LIAFTKFSGEK-------FAIGVMK-KDGSQ----ERLLVEDSN--LQAPTWSPSGRSLI 405
           ++ F + +  K         + + +   G+      R+   DS      P +S  G++L 
Sbjct: 232 MMVFARGNSGKRKDLSPDVDLYMSRYVSGTGWTEPTRITASDSLAYDGCPAFSSDGKTLY 291

Query: 406 FSRKK-DGDTGSKLYSIDLNGRNE--------TLINTPAYASDP 440
           FS  +  G  G  +Y ++L+              INT      P
Sbjct: 292 FSSNRAGGSGGLDIYRVNLDASGRFGNPVNMGKAINTAGDEMFP 335



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 18/79 (22%)

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-----GSKLYS---IDLNG-RNETLINT-- 433
           +  +D N  +P +SP G+ ++F+R   G          LY    +   G    T I    
Sbjct: 214 IFADDRNEGSPAFSPDGKMMVFARGNSGKRKDLSPDVDLYMSRYVSGTGWTEPTRITASD 273

Query: 434 -------PAYASDPQWVGF 445
                  PA++SD + + F
Sbjct: 274 SLAYDGCPAFSSDGKTLYF 292


>gi|124007599|ref|ZP_01692303.1| putative orphan protein ; putative signal peptide [Microscilla
           marina ATCC 23134]
 gi|123986897|gb|EAY26662.1| putative orphan protein ; putative signal peptide [Microscilla
           marina ATCC 23134]
          Length = 284

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 5/147 (3%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINIS 306
             P++I  F      P FS NGK    +  +     DI++  ++S  T +L +T     S
Sbjct: 31  GVPQKISKFAGYNNQPMFSPNGKTLYYTANQGGKQTDIFAYKVKSGKTIQLIDTPTSEYS 90

Query: 307 ASYSPDSSQI-VFESDREGKEQLYVMQS--NGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            + +PD         + +G ++L+      +  +  ++           +W     L+ F
Sbjct: 91  PTITPDGKHFSCIMVEPDGTQRLWKYPLKSDQKNTPQLVLKSVKPIGYHLWVNSDVLVLF 150

Query: 364 T-KFSGEKFAIGVMKKDGSQERLLVED 389
                G+   + +      Q   L  D
Sbjct: 151 VLGAQGQPHHLQLASLQADQGETLATD 177



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 4/89 (4%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
               +P FSPN + + Y          ++    +  +  + I +  +   +P  + +GK 
Sbjct: 41  GYNNQPMFSPNGKTLYYTANQGGKQTDIFAYKVKSGKTIQLI-DTPTSEYSPTITPDGKH 99

Query: 272 A-LISVQKDEAMDIYSVDLQS--NATERL 297
              I V+ D    ++   L+S    T +L
Sbjct: 100 FSCIMVEPDGTQRLWKYPLKSDQKNTPQL 128



 Score = 43.1 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 2/53 (3%)

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQ 441
                P +SP+G++L ++  + G   + +++  + +G+   LI+TP     P 
Sbjct: 41  GYNNQPMFSPNGKTLYYTANQGGKQ-TDIFAYKVKSGKTIQLIDTPTSEYSPT 92



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQ- 393
              ++IS+    +   P++SP G  + +T   G K   I   K    +   L++    + 
Sbjct: 31  GVPQKISKFAGYN-NQPMFSPNGKTLYYTANQGGKQTDIFAYKVKSGKTIQLIDTPTSEY 89

Query: 394 APTWSPSGRS 403
           +PT +P G+ 
Sbjct: 90  SPTITPDGKH 99


>gi|310820285|ref|YP_003952643.1| hypothetical protein STAUR_3024 [Stigmatella aurantiaca DW4/3-1]
 gi|309393357|gb|ADO70816.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 1191

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 56/285 (19%), Positives = 99/285 (34%), Gaps = 55/285 (19%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRI---GNFRSMIL 261
           L   R  I+     SP+ + +AY T   E    R+YL+D +   + +++   G   +  L
Sbjct: 466 LLEERSGIITALNSSPDGKLIAYRTIIPETGESRLYLVDPKAPNSAEKVVSDGQPGAESL 525

Query: 262 AP----RFSSNGKRALISVQKDEAMDIYS------------------------------- 286
            P     FS          + +    IY                                
Sbjct: 526 HPIFGRNFSLAKDSLAYVAEVNGRDVIYVQRYTYVSQQKTIDALVRRSAIRTGIERETNV 585

Query: 287 ---VDLQSNATERLTNTLFINISA-SYSPDSSQIVFES-DREGKEQLYVMQSNGS-DQKR 340
              +DL      R+     + +S+ ++SPD   + F   +  G   +YV+   G  D K 
Sbjct: 586 SVDIDLGDKTAYRVGQHGLLGVSSVAFSPDGQSLAFIGINEAGFRDVYVLSLAGGKDAKP 645

Query: 341 I-SQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKD--GSQERLLVEDSNLQAP 395
           +   D + +     W P G  I +T    S   F +  ++    G+ ERL  E+ +   P
Sbjct: 646 VKLTDDQYTERQITWGPSG--IIYTSDATSHRHFNLFRVQSSAPGAIERLTTEERDEADP 703

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
              P GR + F   ++  + S L+ +   G      +      +P
Sbjct: 704 VALPDGR-IFFVAYRN--SSSDLHELMPGGSIVRRTDLTTGVFEP 745



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 10/158 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRA--PKRIGNFRSMILAPRFSSNGKRALIS 275
            FSP+ Q +A+   ++     VY++     +   P ++ + +       +  +G   + +
Sbjct: 611 AFSPDGQSLAFIGINEAGFRDVYVLSLAGGKDAKPVKLTDDQYTERQITWGPSG--IIYT 668

Query: 276 VQKDEAMDIYSVDLQS---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                        +QS    A ERLT            PD  +I F + R     L+ + 
Sbjct: 669 SDATSHRHFNLFRVQSSAPGAIERLTTEERDEADPVALPDG-RIFFVAYRNSSSDLHELM 727

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             GS  +R   D     F+P   P+G L      SGE+
Sbjct: 728 PGGSIVRR--TDLTTGVFEPGPGPEGSLWMLFHQSGER 763


>gi|226312857|ref|YP_002772751.1| hypothetical protein BBR47_32700 [Brevibacillus brevis NBRC 100599]
 gi|226095805|dbj|BAH44247.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 358

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 73/204 (35%), Gaps = 28/204 (13%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALI 274
            +S + +K+A    D +   I  V +  +    + + +     ++  +P +S +      
Sbjct: 160 AWSNSGKKIAVVEQDKKLSRIWIVEMPTSYSIGSSRLLKEEEGVLYSSPSWSEHDDSLAF 219

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +  K+   +I+     S    +L           +SPD S + F  ++ G+ QL  M+  
Sbjct: 220 TRSKNGVDEIWVSSTVSFQEWKLVEGS----QPEWSPDGSLLAF--NKAGEVQL--MEMR 271

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                 ++  + AS     WS     + +T   G    + V    G +  +  E      
Sbjct: 272 TGKVTSLAVGQWAS-----WSSDMR-LTYTHPDGTLMEVNV----GVEPFVTRELPLRNQ 321

Query: 395 PT-------WSPSGRSLIFSRKKD 411
            +       W+  G+ L+   + D
Sbjct: 322 SSEELIKGNWANKGKHLLLISRHD 345



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 72/181 (39%), Gaps = 19/181 (10%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++AY   + E  L+   +D  +     ++           +S++GK+  +  Q  +   I
Sbjct: 123 QLAYIHNNTE--LKTIPIDAELKPVTIKLPPTEGKYTGVAWSNSGKKIAVVEQDKKLSRI 180

Query: 285 YSVDLQS----NATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + V++ +     ++  L     +   S S+S     + F   + G ++++V  +    + 
Sbjct: 181 WIVEMPTSYSIGSSRLLKEEEGVLYSSPSWSEHDDSLAFTRSKNGVDEIWVSSTVSFQEW 240

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           ++ +  +     P WSP G L+AF     +   + +M+    +   L      Q  +WS 
Sbjct: 241 KLVEGSQ-----PEWSPDGSLLAF----NKAGEVQLMEMRTGKVTSLAVG---QWASWSS 288

Query: 400 S 400
            
Sbjct: 289 D 289



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 63/179 (35%), Gaps = 18/179 (10%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +        E   I  +D +      +L  T       ++S    +I      +   ++
Sbjct: 122 TQLAYIHNNTELKTIP-IDAELKPVTIKLPPTEGKYTGVAWSNSGKKIAVVEQDKKLSRI 180

Query: 329 YVMQSNG----SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           ++++          + + +++   Y  P WS   D +AFT+       I V      QE 
Sbjct: 181 WIVEMPTSYSIGSSRLLKEEEGVLYSSPSWSEHDDSLAFTRSKNGVDEIWVSSTVSFQEW 240

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            LVE S    P WSP G  L F      +   ++  +++     T +    +AS   W 
Sbjct: 241 KLVEGSQ---PEWSPDGSLLAF------NKAGEVQLMEMRTGKVTSLAVGQWAS---WS 287



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 39/108 (36%), Gaps = 11/108 (10%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG----SQERLLVE--DSNLQAPT 396
              E  Y    WS  G  IA  +   +   I +++          RLL E       +P+
Sbjct: 150 PPTEGKYTGVAWSNSGKKIAVVEQDKKLSRIWIVEMPTSYSIGSSRLLKEEEGVLYSSPS 209

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           WS    SL F+R K+G    +++        E  +      S P+W  
Sbjct: 210 WSEHDDSLAFTRSKNG--VDEIWVSSTVSFQEWKL---VEGSQPEWSP 252


>gi|300868373|ref|ZP_07112999.1| putative WD-40 repeat [Oscillatoria sp. PCC 6506]
 gi|300333666|emb|CBN58187.1| putative WD-40 repeat [Oscillatoria sp. PCC 6506]
          Length = 478

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 78/196 (39%), Gaps = 21/196 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISV 276
            F+P+ + +   + D      ++  D +      + I NF S I A   S +   ++  +
Sbjct: 282 AFTPDSEMLISGSKDK----IIFFWDVKTGGKRGQPIENFVSEIRAIAVSPDEHSSIFVI 337

Query: 277 QKDEAMDIYSVDLQSNATER------LTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             D   +I S +  S    +      L+N L IN S ++SPD   +V      G +    
Sbjct: 338 -GDGEGNIQSYNWNSRKKIKSFPAQGLSNGLPIN-SLAFSPDGRILV----SGGDDNSIK 391

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +    S ++  S    A      +SP G LIA    SG    I        +  +L +  
Sbjct: 392 LWDVDSGKELNSGKHSARVRTVAFSPDGKLIASGDDSG---IIETWDVKTMENVVLPKHH 448

Query: 391 N-LQAPTWSPSGRSLI 405
           N + + T+SP G++L 
Sbjct: 449 NVVTSLTFSPDGKTLA 464



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 75/219 (34%), Gaps = 18/219 (8%)

Query: 200 GANIRYLTPSRDQILF---EP-RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           G N    +   D I F    P   SPN Q +A           + L +    +  K I  
Sbjct: 210 GTNQDTFSAKEDIIGFGYPHPIAISPNGQYMATGIIQKIGYGVIKLWNIEEKKEHKEIHG 269

Query: 256 FRSMILA----PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +++  +      F+ +    LIS  KD+ +  + V       + + N +    + + SP
Sbjct: 270 HKNIEFSRIIPVAFTPD-SEMLISGSKDKIIFFWDVKTGGKRGQPIENFVSEIRAIAVSP 328

Query: 312 DSSQIVFE-SDREGKEQLYVMQSNGS----DQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           D    +F   D EG  Q Y   S         + +S     +     +SP G  I  +  
Sbjct: 329 DEHSSIFVIGDGEGNIQSYNWNSRKKIKSFPAQGLSNGLPINSL--AFSPDGR-ILVSGG 385

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 +  +   G +       + ++   +SP G+ + 
Sbjct: 386 DDNSIKLWDVD-SGKELNSGKHSARVRTVAFSPDGKLIA 423



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 9/107 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +        D   + L D    +     G   + +    FS +GK       
Sbjct: 373 AFSPDGRILV----SGGDDNSIKLWDVDSGKELNS-GKHSARVRTVAFSPDGKLIA---S 424

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DRE 323
            D++  I + D+++     L     +  S ++SPD   +   S DR 
Sbjct: 425 GDDSGIIETWDVKTMENVVLPKHHNVVTSLTFSPDGKTLASGSKDRT 471


>gi|315049469|ref|XP_003174109.1| hypothetical protein MGYG_04284 [Arthroderma gypseum CBS 118893]
 gi|311342076|gb|EFR01279.1| hypothetical protein MGYG_04284 [Arthroderma gypseum CBS 118893]
          Length = 826

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/216 (16%), Positives = 75/216 (34%), Gaps = 18/216 (8%)

Query: 195 VMDRDGANIR--YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + D+ G  +R  +        ++   FS +  K+A  + D      V + D+       R
Sbjct: 491 LCDKSGFPLRTAFELSHHTNEVWYLEFSHDGTKLATTSRD----CTVLIYDSTTFEIIHR 546

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSP 311
           +      +    +S +  +  I+  +D    ++  ++Q+      + +      SAS++P
Sbjct: 547 LTEHTEPVAYATWSPDDTKL-ITCSQDFKAKMW--NVQTGTCLLTIEHHEAPITSASWAP 603

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           D    V     + K QL         QK+I  +   +    D   +P G  +        
Sbjct: 604 DGESFV-TGSLDSKSQLCHWSV---PQKKIIYAWRGQYRVRDCAITPDGKRLIAISLQKR 659

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +    + ++     LL  D      + S   R ++
Sbjct: 660 IYVYNFITREEEYSVLLKLDLTCL--SISADSRYML 693



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/253 (10%), Positives = 77/253 (30%), Gaps = 28/253 (11%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISD-------DIYQSITGEKGDFNSRILFVSE 182
           L D   + QI    + ++  S    +  + D         ++        +         
Sbjct: 463 LLDQVKQTQINNCLYHNTAMSPSLYSDHLCDKSGFPLRTAFELSHHTNEVWYLEFSHDGT 522

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + +     ++ + D     I +      + +    +SP+  K+   + D +      + 
Sbjct: 523 KLATTSRDCTVLIYDSTTFEIIHRLTEHTEPVAYATWSPDDTKLITCSQDFK----AKMW 578

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +       I +  + I +  ++ +G+   ++   D    +    +            +
Sbjct: 579 NVQTGTCLLTIEHHEAPITSASWAPDGES-FVTGSLDSKSQLCHWSVPQKKIIYAWRGQY 637

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS------YFDPVWSP 356
                + +PD  +++  S    ++++YV          I++++E S            S 
Sbjct: 638 RVRDCAITPDGKRLIAISL---QKRIYVYNF-------ITREEEYSVLLKLDLTCLSISA 687

Query: 357 QGDLIAFTKFSGE 369
               +       E
Sbjct: 688 DSRYMLVNMSENE 700


>gi|320644861|gb|EFX13897.1| hypothetical protein ECO9389_11865 [Escherichia coli O157:H- str.
           493-89]
 gi|320650125|gb|EFX18621.1| hypothetical protein ECO2687_17320 [Escherichia coli O157:H- str. H
           2687]
          Length = 418

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 268 SGTETTLPAPPRGIVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 327

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 328 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLGN----RIACAHAQSGEVEYLTE 383

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 384 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 417



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 306 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL- 364

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 365 ---GNRIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 417



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +      
Sbjct: 312 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--GN 366

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 367 RIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW 405


>gi|195397113|ref|XP_002057173.1| GJ16947 [Drosophila virilis]
 gi|194146940|gb|EDW62659.1| GJ16947 [Drosophila virilis]
          Length = 358

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 83/224 (37%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 59  YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 114

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + ++ +     + + L          +++P S+ IV  S
Sbjct: 115 SDVAWSSD-SRLLVSGSDDKTLKVWELS-TGKSLKTLKGHSNYVFCCNFNPQSNLIVSGS 172

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 173 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 227

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 228 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 268


>gi|261420848|ref|YP_003254530.1| hypothetical protein GYMC61_3502 [Geobacillus sp. Y412MC61]
 gi|319768519|ref|YP_004134020.1| hypothetical protein GYMC52_3535 [Geobacillus sp. Y412MC52]
 gi|261377305|gb|ACX80048.1| conserved hypothetical protein [Geobacillus sp. Y412MC61]
 gi|317113385|gb|ADU95877.1| hypothetical protein GYMC52_3535 [Geobacillus sp. Y412MC52]
          Length = 583

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 70/191 (36%), Gaps = 26/191 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK+A      DE   ++ +DL SNA +++ +   +     +S D   + +     
Sbjct: 314 TLSPDGKQAAYV---DENGHLFVIDLASNAVKQIGDDDEVKTDLVWSNDGRSL-YCIYGN 369

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--------IGV 375
             + + V+  +  +  ++  DK     D   SP G  + +T  +  K          +  
Sbjct: 370 NNDAVAVVSLDTGNINKLVDDKVKYKTDLRLSPDGTKLLYTVANEGKTNYTDDQKTDVDS 429

Query: 376 MKKDGSQERL----LVEDSNLQAP-TWSPSGR---------SLIFSRKKDGDTGSKLYSI 421
           +   G+  +L    L   +    P T SP  +          +++    D +       +
Sbjct: 430 IDTSGTDPQLFLVDLSSPNKQPTPLTSSPDNKIDSAFLSNNEIVYVSAIDDEATRPSLKL 489

Query: 422 DLNGRNETLIN 432
             NG  +TL+ 
Sbjct: 490 TRNGAEQTLLA 500



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 71/202 (35%), Gaps = 19/202 (9%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           +IR     R     +   SP+ ++ AY   ++  +  + L       A K+IG+   +  
Sbjct: 298 DIRSRAAIRSISQMDLTLSPDGKQAAYVD-ENGHLFVIDL----ASNAVKQIGDDDEVKT 352

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFES 320
              +S++G+     +  +    +  V L +    +L +           SPD +++++  
Sbjct: 353 DLVWSNDGRSL-YCIYGNNNDAVAVVSLDTGNINKLVDDKVKYKTDLRLSPDGTKLLYTV 411

Query: 321 DREGKEQLY--------VMQSNGSDQKRISQDKEASYFDP---VWSPQGDL-IAFTKFSG 368
             EGK             + ++G+D +    D  +    P     SP   +  AF   + 
Sbjct: 412 ANEGKTNYTDDQKTDVDSIDTSGTDPQLFLVDLSSPNKQPTPLTSSPDNKIDSAFLSNNE 471

Query: 369 EKFAIGVMKKDGSQERLLVEDS 390
             +   +  +       L  + 
Sbjct: 472 IVYVSAIDDEATRPSLKLTRNG 493



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 75/225 (33%), Gaps = 35/225 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +N        D++  +  +S + + + Y  Y + +   V ++        K + +     
Sbjct: 338 SNAVKQIGDDDEVKTDLVWSNDGRSL-YCIYGNNNDA-VAVVSLDTGNINKLVDDKVKYK 395

Query: 261 LAPRFSSNGKRALISVQKDE--------------------AMDIYSVDLQS--NATERLT 298
              R S +G + L +V  +                        ++ VDL S       LT
Sbjct: 396 TDLRLSPDGTKLLYTVANEGKTNYTDDQKTDVDSIDTSGTDPQLFLVDLSSPNKQPTPLT 455

Query: 299 NTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           ++    I +++  + ++IV+ S   D   +  L  +  NG++Q  ++             
Sbjct: 456 SSPDNKIDSAFLSN-NEIVYVSAIDDEATRPSL-KLTRNGAEQTLLADQNIIDAVVV--- 510

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
              + I     +   + I +             ++  +  + +PS
Sbjct: 511 --KNRIYVAVETNGIYTIRIFDPSTKSWT-TAGNTKNEITSIAPS 552


>gi|195432210|ref|XP_002064119.1| GK19997 [Drosophila willistoni]
 gi|194160204|gb|EDW75105.1| GK19997 [Drosophila willistoni]
          Length = 358

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 83/224 (37%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 59  YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 114

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + ++ +     + + L          +++P S+ IV  S
Sbjct: 115 SDVAWSSD-SRLLVSGSDDKTLKVWELS-TGKSLKTLKGHSNYVFCCNFNPQSNLIVSGS 172

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 173 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 227

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 228 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 268


>gi|168702201|ref|ZP_02734478.1| RNA polymerase, sigma-24 subunit, ECF subfamily protein [Gemmata
           obscuriglobus UQM 2246]
          Length = 616

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 44/295 (14%), Positives = 90/295 (30%), Gaps = 45/295 (15%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           +    P   R  A  I+     +          ++L  S     G+ +    V   DG  
Sbjct: 282 EHTGPPVVSRAGAGRIA--ARPAPVRVAPPREEQLLVTSFHAADGVAE----VFKPDGTP 335

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI---------LRVYLMDTRIDRAPKRI 253
            R L+      ++ PR+SP+  ++A                  L V+   ++       I
Sbjct: 336 ARRLSMGELGHVWRPRYSPDGTRLAVTKVGPFVPNSGPWASIDLHVFDPASKDGPGEPLI 395

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDI----------YSVDLQSNATER--LTNTL 301
              R M  A  +  +G +  +S    +  D+          +  DL++       L    
Sbjct: 396 SGMRCMFFA--WHPDGTKLYVSHLPPDVKDVAADKPAPVATWVYDLKTKKKAPLELPAGY 453

Query: 302 FINISASYSPDSSQIV---FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            I      S D   ++      +     + Y++       + +++ +   +     SP G
Sbjct: 454 GIVD---VSRDGKTLLAVTMTLNDVYPSRTYLIPVATLKPQLLTEKR---FDGQRLSPDG 507

Query: 359 DLIAFTKFSGEKFAI-------GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
             +   +   +   +        V        +L      +    WSP+GR + F
Sbjct: 508 KSVLGVRVEKDLVPLTRSLTVVAVADGSERAVKLPAGADRVYQACWSPNGRRIAF 562



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 46/145 (31%), Gaps = 20/145 (13%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-- 368
           P   Q++  S         V + +G+  +R+S  +    + P +SP G  +A TK     
Sbjct: 309 PREEQLLVTSFHAADGVAEVFKPDGTPARRLSMGELGHVWRPRYSPDGTRLAVTKVGPFV 368

Query: 369 ------EKFAIGVMKK---DGSQERLLVEDSNLQAPTWSPSGRSLIFSR--------KKD 411
                     + V      DG  E L+          W P G  L  S           D
Sbjct: 369 PNSGPWASIDLHVFDPASKDGPGEPLI-SGMRCMFFAWHPDGTKLYVSHLPPDVKDVAAD 427

Query: 412 GDTGSKLYSIDLNGRNETLINTPAY 436
                  +  DL  + +  +  PA 
Sbjct: 428 KPAPVATWVYDLKTKKKAPLELPAG 452



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 67/227 (29%), Gaps = 43/227 (18%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED--------ILRVYLMDTRIDRAP 250
           DG     ++  R        + P+  K+ Y ++   D           V      +    
Sbjct: 388 DGPGEPLISGMR---CMFFAWHPDGTKL-YVSHLPPDVKDVAADKPAPVATWVYDLKTKK 443

Query: 251 KRIGNFRSMILAPRFSSNGKRAL---ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           K      +       S +GK  L   +++        Y + + +   + LT   F     
Sbjct: 444 KAPLELPAGYGIVDVSRDGKTLLAVTMTLNDVYPSRTYLIPVATLKPQLLTEKRF--DGQ 501

Query: 308 SYSPDSSQIVFESDREGKEQL-------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             SPD   ++    R  K+ +        V  ++GS++           +   WSP G  
Sbjct: 502 RLSPDGKSVL--GVRVEKDLVPLTRSLTVVAVADGSERAVKLPAGADRVYQACWSPNGRR 559

Query: 361 IAFT----------------KFSGEKFAIGVMKKDGSQER-LLVEDS 390
           IAF                    G    + V   DG   + +L  D 
Sbjct: 560 IAFHWCEEVPVEPNQVLGVEGGKGWADRVTVADPDGGNPKTILTSDG 606


>gi|82546041|ref|YP_409988.1| hypothetical protein SBO_3682 [Shigella boydii Sb227]
 gi|81247452|gb|ABB68160.1| conserved hypothetical protein [Shigella boydii Sb227]
          Length = 337

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 187 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 246

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 247 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 302

Query: 389 D----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 303 SHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 336



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 225 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 284

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT +     SA    +SPD   + +    EG  QL++ +++
Sbjct: 285 N----RIACAHAQSGEVEYLTESHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 336



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 238 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 295

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 296 EVEYLTESHANPPSAD-AVVFSPDGQWLAW 324


>gi|73670595|ref|YP_306610.1| hypothetical protein Mbar_A3144 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397757|gb|AAZ72030.1| hypothetical protein Mbar_A3144 [Methanosarcina barkeri str.
           Fusaro]
          Length = 971

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 63/164 (38%), Gaps = 12/164 (7%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              ++  DL +    ++T   + +  A Y+    +IV+     G + +Y+   + + +  
Sbjct: 55  NGSLHLRDLSTGKEIQITEDPWYSYLAVYN---DKIVWG---PGGQNIYLYNISTNHKTL 108

Query: 341 IS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           +S  + E        +  GD I +   SG    I +       +  +  + + + P    
Sbjct: 109 LSIPESENQGSRDSLTIYGDKIVWRDQSGGYQDIYMYDLSTYNKTRITTNQSTKDPVI-- 166

Query: 400 SGRSLIFSRKKD---GDTGSKLYSIDLNGRNETLINTPAYASDP 440
            G  +++        G +   +Y  +L+  N+T + T   AS P
Sbjct: 167 YGDKIVWQEDPSFGFGSSYHDIYVYNLSTSNKTRVTTNRSASSP 210



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 79/230 (34%), Gaps = 34/230 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P  Q +            + + ++    +   +  +            G + +   Q 
Sbjct: 89  WGPGGQNIYLYNISTNHKTLLSIPESENQGSRDSLTIY------------GDKIVWRDQS 136

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQS 333
               DIY  DL +    R+T          Y     +IV++ D           +YV   
Sbjct: 137 GGYQDIYMYDLSTYNKTRITTNQSTKDPVIY---GDKIVWQEDPSFGFGSSYHDIYVYNL 193

Query: 334 NGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           + S++ R++ ++ AS      SP   GD I + + +     I       S E  +  + +
Sbjct: 194 STSNKTRVTTNRSAS------SPNVYGDRIVYMESN----NIYFHNLSTSLETQITFNGS 243

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            +    +  G  +++   ++G+    +Y +  + +   + N  +   +P 
Sbjct: 244 RKD-KLAIYGDRIVWQDDRNGNWDVYVYDLSED-KEIQITNDESDQLNPA 291



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 116/333 (34%), Gaps = 21/333 (6%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           T  +    ++     FR+ DV          +  S  +   +  T +D +  +I    G 
Sbjct: 647 TVSLTASNENSTNSTFRVIDVFKTTGPFA--YVISGNNI-SVIDTATDKVVDTIEIGSGL 703

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATY 231
                +  + + V    + +  V   D +  + + T +     +    +P+ +K AY T 
Sbjct: 704 -VGVAVNPTGTKVYVANEGNNTVSVIDTSISKVIATVNGLNSPYAIAITPDGKK-AYVTN 761

Query: 232 DDEDILR---VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           +   +     VY++DT        + N  S+      S +G +  ++       DI  +D
Sbjct: 762 NSGAVFENGTVYVIDTGTSTVMNTV-NVGSVPHGVAVSLDGAKVYVT----NYYDISVID 816

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             +N      N        + SPD ++I   +   G + + V+ +  ++        +  
Sbjct: 817 TATNKVTATLNVGQYPDGIAVSPDGTKIYVTN--GGSDNVSVIDTETNNVTATLPVGDNP 874

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                 +P G  +  T + G    I V+    +     +        + +P G+ + +  
Sbjct: 875 VRV-AVTPDGTKLYVTNYKGNT--ISVINTTTNTVTATIPGDGPYGVSITPDGKKV-YVT 930

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
               D   K  S+ ++    T+I T    S P+
Sbjct: 931 NLGSDLSGKTVSV-IDTAANTVIATVKVGSYPR 962



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 86/266 (32%), Gaps = 50/266 (18%)

Query: 192 SLCVMDRDGANIRYLTPS---RDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTR 245
            + + D    N   +T +   +D +++         K+ +    ++          +   
Sbjct: 141 DIYMYDLSTYNKTRITTNQSTKDPVIY-------GDKIVWQEDPSFGFGSSYHDIYVYNL 193

Query: 246 IDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                 R+   RS       S N  G R +     +    IY  +L ++   ++T     
Sbjct: 194 STSNKTRVTTNRSAS-----SPNVYGDRIVYMESNN----IYFHNLSTSLETQITFNGSR 244

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               +      +IV++ DR G   +YV   +   + +I+ D+       ++   GD I +
Sbjct: 245 KDKLAIY--GDRIVWQDDRNGNWDVYVYDLSEDKEIQITNDESDQLNPAIY---GDKIVW 299

Query: 364 TKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAPTWSPS-----GRS---LIFSRKK 410
             +  ++       I +                +   ++S +     G     ++F+   
Sbjct: 300 EDYRNDRENMYYCSIYMYDFS--------AKPTMPFASFSANITSKSGNMPLTVLFTCNS 351

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAY 436
            G T +  Y    +G N     T  +
Sbjct: 352 TGGTPTSWYWDFGDGINSKHAQTATH 377



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 18/169 (10%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            QS        +  +     S   G   + + V +   +N   +T +R         SPN
Sbjct: 158 NQSTKDPVIYGDKIVWQEDPSFGFGSSYHDIYVYNLSTSNKTRVTTNRSAS------SPN 211

Query: 223 --QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
               ++ Y   ++     +Y  +       +   N         +   G R +    ++ 
Sbjct: 212 VYGDRIVYMESNN-----IYFHNLSTSLETQITFNGSRKDKLAIY---GDRIVWQDDRNG 263

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
             D+Y  DL  +   ++TN     ++ +      +IV+E  R  +E +Y
Sbjct: 264 NWDVYVYDLSEDKEIQITNDESDQLNPAIY--GDKIVWEDYRNDRENMY 310


>gi|323164700|gb|EFZ50495.1| hypothetical protein SS53G_5022 [Shigella sonnei 53G]
          Length = 404

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 403



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +    D 
Sbjct: 298 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 352

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 353 RIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW 391


>gi|195132861|ref|XP_002010858.1| GI21774 [Drosophila mojavensis]
 gi|193907646|gb|EDW06513.1| GI21774 [Drosophila mojavensis]
          Length = 358

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 83/224 (37%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 59  YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 114

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + ++ +     + + L          +++P S+ IV  S
Sbjct: 115 SDVAWSSD-SRLLVSGSDDKTLKVWELS-TGKSLKTLKGHSNYVFCCNFNPQSNLIVSGS 172

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 173 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 227

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 228 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 268


>gi|154285128|ref|XP_001543359.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150407000|gb|EDN02541.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 657

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 16/167 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  K+A           V + D        R+ +    +    +S +  +  IS  +
Sbjct: 320 FSHDGTKLATT----GRENIVIIYDVATFSVIHRLTDHGGPVAYATWSPDDSKL-ISCSQ 374

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D    ++  D+++     LT  +      SA+++P+    V     + + QL      G 
Sbjct: 375 DYKARLW--DVETGHCI-LTIDHHHEPVTSAAWAPNGDSFV-TGSLDCQSQLCHWSVAGE 430

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                    +    D   SP G  +           I V   +   E
Sbjct: 431 SL--YKWTGQYRVRDCAISPDGRRLIAISTEK---RIYVYNFETRAE 472



 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 13/165 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G +   + +++    +   D+ + +   RLT+       A++SPD S+++  S  +
Sbjct: 320 FSHDGTKLATTGREN---IVIIYDVATFSVIHRLTDHGGPVAYATWSPDDSKLISCSQ-D 375

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            K +L+                        W+P GD          +  +      G   
Sbjct: 376 YKARLW--DVETGHCILTIDHHHEPVTSAAWAPNGDSFVTGSLDC-QSQLCHWSVAGESL 432

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                   ++    SP GR LI    +      ++Y  +   R E
Sbjct: 433 YKWTGQYRVRDCAISPDGRRLIAISTEK-----RIYVYNFETRAE 472



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 69/217 (31%), Gaps = 16/217 (7%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG--EKGDFNSRILFVSESVVSG 187
           L D   + QI    + ++       +    D     +    E  +    + ++  S    
Sbjct: 266 LLDQVKQTQINQCLYHNTAEPPSLYSDHQCDRAQFPLRTSFELSEHTDEVWYLEFSHDGT 325

Query: 188 I-----IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
                  +N + + D    ++ +        +    +SP+  K+   + D +      L 
Sbjct: 326 KLATTGRENIVIIYDVATFSVIHRLTDHGGPVAYATWSPDDSKLISCSQDYK----ARLW 381

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D         I +    + +  ++ NG    ++   D    +    +   +  + T   +
Sbjct: 382 DVETGHCILTIDHHHEPVTSAAWAPNGDS-FVTGSLDCQSQLCHWSVAGESLYKWT-GQY 439

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                + SPD  +++  S     +++YV       ++
Sbjct: 440 RVRDCAISPDGRRLIAISTE---KRIYVYNFETRAEE 473


>gi|74314005|ref|YP_312424.1| hypothetical protein SSON_3640 [Shigella sonnei Ss046]
 gi|73857482|gb|AAZ90189.1| conserved hypothetical protein [Shigella sonnei Ss046]
          Length = 416

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +    D 
Sbjct: 310 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 364

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 365 RIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW 403


>gi|228905956|ref|ZP_04069852.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis IBL 200]
 gi|228853689|gb|EEM98450.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis IBL 200]
          Length = 693

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 93/293 (31%), Gaps = 45/293 (15%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++        +N + + ++D         + D     P +SP+ + +AY +   +
Sbjct: 71  VAFVKKTADWKDNTYRNHVWIYEKD-KKQSSQLSNGDIDSTHPLWSPDARCIAYLSPVGD 129

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQS-- 291
              ++++         + I + +  I   ++   GK      Q  E  +I    DL    
Sbjct: 130 GENQIFVKSLGSYSEVQ-ITDEKEGISTFKWDPTGKGLYYVTQLKECEEIKKRKDLYGDF 188

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  +     +I I           V +SD +  E   V         +++  K+  
Sbjct: 189 QHIGKEHQNNCLYYIEIE---------KVIQSDTDEHENRVVY--------QLTDGKDFH 231

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWSPSG 401
             +   S  G  I F               + ++     + + L V+     +  +SP G
Sbjct: 232 IHEFDISNDGKKIVFMATPSSNMADYINGDLYILHTKAGELQKLNVDKLLGGSVCFSPDG 291

Query: 402 RSLIFSRKKDG---------DTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
             + ++    G         D   ++Y ++  G     +        P QW  
Sbjct: 292 SKICYTASIRGRDYYRNHIQDCTLEIYDMN-TGEVIQPLTDFDSTVMPLQWTA 343



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/340 (14%), Positives = 113/340 (33%), Gaps = 64/340 (18%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGA 201
            F    A W+   +     IY+    +    ++  +  +  + S   +    +    DG 
Sbjct: 72  AFVKKTADWKDNTYRNHVWIYEKDKKQSSQLSNGDIDSTHPLWSPDARCIAYLSPVGDGE 131

Query: 202 NIRY-----------LTPSRDQILFEPRFSPNQQKVAYATYDDE---------------- 234
           N  +           +T  ++ I    ++ P  + + Y T   E                
Sbjct: 132 NQIFVKSLGSYSEVQITDEKEGISTF-KWDPTGKGLYYVTQLKECEEIKKRKDLYGDFQH 190

Query: 235 -------------DILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRALISVQK 278
                        +I +V   DT                        S++GK+ +     
Sbjct: 191 IGKEHQNNCLYYIEIEKVIQSDTDEHENRVVYQLTDGKDFHIHEFDISNDGKKIVFMATP 250

Query: 279 DEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY--- 329
              M      D+Y +  ++   ++L     +  S  +SPD S+I + +   G++      
Sbjct: 251 SSNMADYINGDLYILHTKAGELQKLNVDKLLGGSVCFSPDGSKICYTASIRGRDYYRNHI 310

Query: 330 ------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                 +   N  +  +   D +++     W+ +G  I     +   + IG++ +DG+ E
Sbjct: 311 QDCTLEIYDMNTGEVIQPLTDFDSTVMPLQWTAKG--ILIRWQNKTNYLIGLLAEDGTVE 368

Query: 384 RLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            L  + D  +   + +  G+ + +++    +T  ++Y  D
Sbjct: 369 ALSEKVDGFIMDASITKDGKHISYNKAITNET-FEIYLDD 407



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 65/195 (33%), Gaps = 43/195 (22%)

Query: 266 SSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GK      +  +  D      ++  +     + +L+N    +    +SPD+  I + 
Sbjct: 65  SDDGKNVAFVKKTADWKDNTYRNHVWIYEKDKKQSSQLSNGDIDSTHPLWSPDARCIAYL 124

Query: 320 SDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF------------ 366
           S   +G+ Q++V       + +I+ +KE       W P G  + +               
Sbjct: 125 SPVGDGENQIFVKSLGSYSEVQITDEKEGISTFK-WDPTGKGLYYVTQLKECEEIKKRKD 183

Query: 367 -SGEKFAIG---------------VMKKDGSQ-----ERLLVE--DSNLQAPTWSPSGRS 403
             G+   IG               V++ D  +        L +  D ++     S  G+ 
Sbjct: 184 LYGDFQHIGKEHQNNCLYYIEIEKVIQSDTDEHENRVVYQLTDGKDFHIHEFDISNDGKK 243

Query: 404 LIFSRKKDGDTGSKL 418
           ++F      +    +
Sbjct: 244 IVFMATPSSNMADYI 258


>gi|188990041|ref|YP_001902051.1| exported dipeptidyl-peptidase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167731801|emb|CAP49983.1| exported dipeptidyl-peptidase [Xanthomonas campestris pv.
           campestris]
          Length = 774

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 58/394 (14%), Positives = 110/394 (27%), Gaps = 98/394 (24%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           +V      R R E R  DV                  R         +Y S   E G   
Sbjct: 119 KVRLTADGRYRFEIRDTDVIC--------------DVRAA----CSKVYASEKAEPG--- 157

Query: 175 SRILFVSESVVSGIIKNSLCV----------MDRDG-ANIRYLTPSRDQILFEPR---FS 220
             +L   ++  + I   +L V          + RDG  N  Y T +      +     +S
Sbjct: 158 --VLSPDKTREAFIRNWNLWVRELATGKETQLTRDGVENFGYATDNAGWQHSDNAIVAWS 215

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKR---------------------------- 252
           P+ +K+A    D      +YL+ T++     +                            
Sbjct: 216 PDSRKIATFQQDQRKTGDMYLVSTKLGHPELQSWKYPLAGDKDVTMIERVIIDVPTASVV 275

Query: 253 ----------------IGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNAT 294
                           +     +    +++ + K    +        ++    D  + A 
Sbjct: 276 RLKLPPDQHRSTLCDDVSCSPGLWDDVKWAPDSKTLAFASTSRFHKQVWLRIADASTGAV 335

Query: 295 ERL------TNTLFINISASYS--PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                    T      ++A+++  P S++ V+ S+R    QLY+        KR     E
Sbjct: 336 RTAFDETAKTYYESGQVAANWAYLPGSNEAVWFSERSDWGQLYLYDLQTGKPKRAITSGE 395

Query: 347 ASYFD-PVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            +  +     P      F               +  +  DG    LL  ++   +   SP
Sbjct: 396 GNVTELLRVDPVSRTAWFVGVGKVPGVDPYYQQLWKVSLDGGAPVLLTPEAADHSIALSP 455

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            G   + +          +     +GR  + + T
Sbjct: 456 DGARFVDTYSTTLTPPVSVLRAAADGRTLSTVAT 489


>gi|153002263|ref|YP_001367944.1| peptidase S9 prolyl oligopeptidase [Shewanella baltica OS185]
 gi|151366881|gb|ABS09881.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella baltica OS185]
          Length = 826

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 77/226 (34%), Gaps = 13/226 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++  +A    ++          T+  R  + + ++     A ++  +  +  + ++  + 
Sbjct: 337 DEDVLAKVKAENAKAKGETYQSTKAPRKIQLMQDWGWTQSAIQWHESEDKLALMLEATDN 396

Query: 282 MDIYSVDLQSNATERLTNTLFINISAS--------YSPDSSQIVFESDREGKEQLYVMQS 333
            D +   +     +  T     + +          + P +  + + S+  G  QLYV   
Sbjct: 397 KDRWIASVDLTKGKFTTEHRLHDDAWVNYDYNQFGWLPGTDSLYYLSEESGYSQLYVKGL 456

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSN 391
            G   + ++Q K     D   SP  + I +         + +  +     +   L +   
Sbjct: 457 -GEKPRALTQGKFV-VSDITLSPDANYIYYKANQTHPGIYNVHRVNLATGKNEQLTQWDG 514

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               + SP G  L+ +  +      +LY   + G  + L +  + A
Sbjct: 515 NLDYSLSPDGTQLLLNASRRTQPN-ELYVQPIGGELKQLTSYTSDA 559



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 6/138 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P    + Y + +        L    +   P+ +   + ++     S +         +
Sbjct: 432 WLPGTDSLYYLSEESG---YSQLYVKGLGEKPRALTQGKFVVSDITLSPDANYIYYKANQ 488

Query: 279 D--EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                 +++ V+L +   E+LT     N+  S SPD +Q++  + R  +     +Q  G 
Sbjct: 489 THPGIYNVHRVNLATGKNEQLTQWDG-NLDYSLSPDGTQLLLNASRRTQPNELYVQPIGG 547

Query: 337 DQKRISQDKEASYFDPVW 354
           + K+++     ++ +  W
Sbjct: 548 ELKQLTSYTSDAFKNYPW 565



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 40/104 (38%), Gaps = 4/104 (3%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           G   R LT  +  ++ +   SP+   + Y A      I  V+ ++    +  +++  +  
Sbjct: 457 GEKPRALTQGK-FVVSDITLSPDANYIYYKANQTHPGIYNVHRVNLATGKN-EQLTQWDG 514

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             L    S +G + L++  +    +   V       ++LT+   
Sbjct: 515 -NLDYSLSPDGTQLLLNASRRTQPNELYVQPIGGELKQLTSYTS 557


>gi|187733845|ref|YP_001882471.1| hypothetical protein SbBS512_E4230 [Shigella boydii CDC 3083-94]
 gi|187430837|gb|ACD10111.1| conserved hypothetical protein [Shigella boydii CDC 3083-94]
 gi|320173609|gb|EFW48801.1| hypothetical protein YidR [Shigella dysenteriae CDC 74-1112]
          Length = 356

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 206 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 265

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 266 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 321

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 322 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 355



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 244 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 303

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 304 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 355



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +    D 
Sbjct: 250 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 304

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 305 RIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW 343


>gi|229176761|ref|ZP_04304163.1| Acylamino-acid-releasing enzyme [Bacillus cereus 172560W]
 gi|228606653|gb|EEK64072.1| Acylamino-acid-releasing enzyme [Bacillus cereus 172560W]
          Length = 654

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 97/293 (33%), Gaps = 45/293 (15%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++      I +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 32  VAFVKKTADWKDNIYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDARCIAYLSRVGD 90

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQS-- 291
              ++++     D    +I + +  +   ++   GK      Q  E  +I    +L    
Sbjct: 91  GGNQIFVKSLD-DYREVQITDEKEGVSTFKWGPTGKGLYYVTQSKECEEIKKRKNLYGDF 149

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  +     +I I           V +SD +  E   V         +++  K+  
Sbjct: 150 QHIGKEHQNNCLYYIEIE---------KVIQSDTDEHENRVVY--------QLTDGKDFH 192

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWSPSG 401
             +   S  G  + F               + ++     + + L V+     +  +SP G
Sbjct: 193 IHEFDISNDGKKVVFMATPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPDG 252

Query: 402 RSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
             + ++         R    D+  ++Y ++  G     +        P QW  
Sbjct: 253 SKICYTASIREKDYYRNHIQDSTLEIYDMN-TGEVIQPLTNFDSTVMPLQWTA 304


>gi|327439903|dbj|BAK16268.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Solibacillus
           silvestris StLB046]
          Length = 599

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 7/163 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FESD 321
             S +  + + S       ++++++L S    +LT          Y      I+  F+ D
Sbjct: 22  AVSPDENQLVFSTNLSGKYNLWAMNLPSTFPTQLTFNNQSCHGLLYDKQGRFILAGFDED 81

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI--GVMKKD 379
                Q Y +  +G   K I  ++       + S  G  + +T   G    +       +
Sbjct: 82  GNENTQFYGLPLHGGTLKPIINEEGTRNTGMILSEDGKKLYYTSSKGNPSFLNTYKYDLE 141

Query: 380 GSQERLLVEDSNLQAPTW--SPSGRSLIFSRKKDGDTGSKLYS 420
              E L++E       +   SP+  +L++      +T S LY+
Sbjct: 142 TGAEELILEGKTTPTLSIGLSPNEETLLYMMGYS-NTHSLLYA 183



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 5/126 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTKFS 367
           SPD +Q+VF ++  GK  L+ M    +   +++ +   S    ++  QG  I   F +  
Sbjct: 24  SPDENQLVFSTNLSGKYNLWAMNLPSTFPTQLTFN-NQSCHGLLYDKQGRFILAGFDEDG 82

Query: 368 GEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            E      +   G   + ++  E +       S  G+ L ++  K   +    Y  DL  
Sbjct: 83  NENTQFYGLPLHGGTLKPIINEEGTRNTGMILSEDGKKLYYTSSKGNPSFLNTYKYDLET 142

Query: 426 RNETLI 431
             E LI
Sbjct: 143 GAEELI 148



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 33/85 (38%), Gaps = 1/85 (1%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIF 406
           S  D   SP  + + F+     K+ +  M    +    L   + +     +   GR ++ 
Sbjct: 17  SIRDFAVSPDENQLVFSTNLSGKYNLWAMNLPSTFPTQLTFNNQSCHGLLYDKQGRFILA 76

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLI 431
              +DG+  ++ Y + L+G     I
Sbjct: 77  GFDEDGNENTQFYGLPLHGGTLKPI 101


>gi|308162225|gb|EFO64633.1| WD-40 repeat protein [Giardia lamblia P15]
          Length = 301

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 75/202 (37%), Gaps = 20/202 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + + +   + D      + L DT   +    +    + + + R S +G+    SV 
Sbjct: 107 SFSIDGRTIVTCSDDK----SIKLFDTTNVQFRVCLSGHTNWVYSARLSPDGRLIA-SVS 161

Query: 278 KDEAMDIYSVDLQS-NATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQS 333
            D ++ I+  D ++ +  + +TN   ++++     +SPD + +         + + +   
Sbjct: 162 DDLSLRIW--DTRTLSCVQAITNDNGLSLNPRVIRWSPDGTTVA----TGCTQDVQLWDV 215

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             S   +             + P G  +  T   G    + +++   S   +   +  + 
Sbjct: 216 RSSTLLQHYSCHTNQVTCLDFHPNGKYMVSTGSDGTARILDLVQ-GRSLYTVRGHEGGVN 274

Query: 394 APTWSPSGRSLIFSRKKDGDTG 415
             ++ P G   +F+    GD G
Sbjct: 275 CISFCPDGS--VFAT--GGDDG 292



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 66/186 (35%), Gaps = 19/186 (10%)

Query: 198 RDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D  N+++          ++  R SP+ + +A  + D    L + + DTR     + I N
Sbjct: 127 FDTTNVQFRVCLSGHTNWVYSARLSPDGRLIASVSDD----LSLRIWDTRTLSCVQAITN 182

Query: 256 FRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSP 311
              + L P   R+S +G        +D  +     D++S+   +  +          + P
Sbjct: 183 DNGLSLNPRVIRWSPDGTTVATGCTQDVQLW----DVRSSTLLQHYSCHTNQVTCLDFHP 238

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           +   +V  +  +G  ++  +           +  E       + P G + A     G   
Sbjct: 239 NGKYMV-STGSDGTARI--LDLVQGRSLYTVRGHEGGVNCISFCPDGSVFATGGDDGRVM 295

Query: 371 -FAIGV 375
            F +GV
Sbjct: 296 LFELGV 301


>gi|301753118|ref|XP_002912387.1| PREDICTED: WD repeat and SOCS box-containing protein 1-like
           [Ailuropoda melanoleuca]
          Length = 421

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC---SVGASKAVFLWDMDKYAMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 268 GALLATASYDT---RVYLWDPHTGD--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 322

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 323 GLHVA---SLADDKMVRFWRIDED 343



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 80/259 (30%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++           R +  T + D               ++ VS S   
Sbjct: 151 RIKIWDVYTGKLLL--NLVDHTEVVRDL--TFAPD-------------GSLILVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L D   
Sbjct: 194 TL---RVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSMLCSV----GASKAVFLWDMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + ++  D  +               
Sbjct: 246 YAMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYLW--DPHTGDILMEFGHLFPPPT 302

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   +   +D +   + + +  +     +++          
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 357

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 358 AFSTDGSVLAAGTHDGSVY 376



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 32/99 (32%), Gaps = 4/99 (4%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 149 NGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 208

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +L    N   +  +SP    L             L+ +D
Sbjct: 209 VLRGHQNWVYSCAFSPDSSML---CSVGASKAVFLWDMD 244


>gi|168748592|ref|ZP_02773614.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|168753581|ref|ZP_02778588.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|168766179|ref|ZP_02791186.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|168772273|ref|ZP_02797280.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|168785647|ref|ZP_02810654.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|168798727|ref|ZP_02823734.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|195936314|ref|ZP_03081696.1| hypothetical protein EscherichcoliO157_07588 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208809431|ref|ZP_03251768.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208814514|ref|ZP_03255843.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208821246|ref|ZP_03261566.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209398871|ref|YP_002273220.1| hypothetical protein ECH74115_5122 [Escherichia coli O157:H7 str.
           EC4115]
 gi|261225846|ref|ZP_05940127.1| hypothetical protein EscherichiacoliO157_14773 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261258891|ref|ZP_05951424.1| hypothetical protein EscherichiacoliO157EcO_24262 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291285113|ref|YP_003501931.1| hypothetical protein G2583_4483 [Escherichia coli O55:H7 str.
           CB9615]
 gi|187771548|gb|EDU35392.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4196]
 gi|188016865|gb|EDU54987.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4113]
 gi|189359055|gb|EDU77474.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4401]
 gi|189364415|gb|EDU82834.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4486]
 gi|189374665|gb|EDU93081.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC869]
 gi|189378805|gb|EDU97221.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC508]
 gi|208729232|gb|EDZ78833.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4206]
 gi|208735791|gb|EDZ84478.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4045]
 gi|208741369|gb|EDZ89051.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4042]
 gi|209160271|gb|ACI37704.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4115]
 gi|209747450|gb|ACI72032.1| hypothetical protein ECs4629 [Escherichia coli]
 gi|209747452|gb|ACI72033.1| hypothetical protein ECs4629 [Escherichia coli]
 gi|209747454|gb|ACI72034.1| hypothetical protein ECs4629 [Escherichia coli]
 gi|290764986|gb|ADD58947.1| hypothetical protein G2583_4483 [Escherichia coli O55:H7 str.
           CB9615]
 gi|320191206|gb|EFW65856.1| hypothetical protein YidR [Escherichia coli O157:H7 str. EC1212]
 gi|320639418|gb|EFX09033.1| hypothetical protein ECO5101_05963 [Escherichia coli O157:H7 str.
           G5101]
 gi|320666225|gb|EFX33231.1| hypothetical protein ECOSU61_04991 [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326341628|gb|EGD65417.1| Uncharacterized protein YidR [Escherichia coli O157:H7 str. 1125]
          Length = 416

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGIVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLGN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL- 362

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 363 ---GNRIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +      
Sbjct: 310 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--GN 364

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 365 RIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW 403



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 50/151 (33%), Gaps = 30/151 (19%)

Query: 290 QSNATERLT----NTLFINISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRI 341
           Q  A +++T    N L  N + +++PDS  +VF+    G     E +  +  +  + + I
Sbjct: 9   QDRAMKQITFAPRNHLLTNTN-TWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVI 67

Query: 342 SQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMK----------------KDGSQER 384
            +  + ++   V   P+ +   F                               D     
Sbjct: 68  YRVSQGAHVGVVTVHPKSEKYVFIHGPENPHETWHYDFHHRRGVIVEGGKMNNLDAMDIT 127

Query: 385 LLVEDSNLQAPT----WSPSGRSLIFSRKKD 411
           +      L+  +    +SP+G  + F+    
Sbjct: 128 VPYTSGALRGGSHVHVFSPNGEMVSFTYNDH 158


>gi|254795697|ref|YP_003080534.1| hypothetical protein ECSP_4740 [Escherichia coli O157:H7 str.
           TW14359]
 gi|254595097|gb|ACT74458.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
 gi|320661099|gb|EFX28535.1| hypothetical protein ECO5905_17558 [Escherichia coli O55:H7 str.
           USDA 5905]
          Length = 404

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGIVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLGN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 403



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL- 350

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 351 ---GNRIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +      
Sbjct: 298 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--GN 352

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 353 RIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW 391



 Score = 36.9 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 48/147 (32%), Gaps = 30/147 (20%)

Query: 294 TERLT----NTLFINISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRISQDK 345
            +++T    N L  N + +++PDS  +VF+    G     E +  +  +  + + I +  
Sbjct: 1   MKQITFAPRNHLLTNTN-TWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRVS 59

Query: 346 EASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMK----------------KDGSQERLLVE 388
           + ++   V   P+ +   F                               D     +   
Sbjct: 60  QGAHVGVVTVHPKSEKYVFIHGPENPHETWHYDFHHRRGVIVEGGKMNNLDAMDITVPYT 119

Query: 389 DSNLQAPT----WSPSGRSLIFSRKKD 411
              L+  +    +SP+G  + F+    
Sbjct: 120 SGALRGGSHVHVFSPNGEMVSFTYNDH 146


>gi|189010112|ref|ZP_03006207.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
 gi|189002455|gb|EDU71441.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4076]
          Length = 415

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 265 SGTETTLPAPPRGIVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 324

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 325 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLGN----RIACAHAQSGEVEYLTE 380

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 381 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 414



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 303 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL- 361

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 362 ---GNRIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 414



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 34/100 (34%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +      
Sbjct: 309 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--GN 363

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 364 RIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW 402



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 50/151 (33%), Gaps = 30/151 (19%)

Query: 290 QSNATERLT----NTLFINISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRI 341
           Q  A +++T    N L  N + +++PDS  +VF+    G     E +  +  +  + + I
Sbjct: 8   QDRAMKQITFAPRNHLLTNTN-TWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVI 66

Query: 342 SQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMK----------------KDGSQER 384
            +  + ++   V   P+ +   F                               D     
Sbjct: 67  YRVSQGAHVGVVTVHPKSEKYVFIHGPENPHETWHYDFHHRRGVIVEGGKMNNLDAMDIT 126

Query: 385 LLVEDSNLQAPT----WSPSGRSLIFSRKKD 411
           +      L+  +    +SP+G  + F+    
Sbjct: 127 VPYTSGALRGGSHVHVFSPNGEMVSFTYNDH 157


>gi|332022777|gb|EGI63050.1| WD repeat-containing protein 5 [Acromyrmex echinatior]
          Length = 333

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 82/224 (36%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++Y      + +   +FSPN + +A +  D      + +  +   +  K I   +  I
Sbjct: 34  YTLKYTLAGHTKAVSSVKFSPNGEWLASSAADK----LIKIWGSYDGKFEKTIAGHKLGI 89

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + I+ +       + L          +++P S+ IV  S
Sbjct: 90  SDVAWSSD-SRLLVSASDDKTLKIWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 147

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 148 F---DESVRIWDVRSGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 202

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 243


>gi|294142669|ref|YP_003558647.1| prolyl oligopeptidase family protein [Shewanella violacea DSS12]
 gi|293329138|dbj|BAJ03869.1| prolyl oligopeptidase family protein [Shewanella violacea DSS12]
          Length = 657

 Score = 62.7 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 65/186 (34%), Gaps = 8/186 (4%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               FS NG+  LI   +    ++Y +D  + A   LT         S+ P+  +++   
Sbjct: 58  FGSSFSENGESILIGSDQSGIFNLYKLDAATGAQSPLTTFKDTTYPVSWFPNDDRVLLTQ 117

Query: 321 DREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-AFTKFSGEKF-AIGVM 376
           D  G     L+V + +G     I+   E       ++  G    A T     KF  +   
Sbjct: 118 DNAGNELYHLFVRELDG-KITDITPGDETRAGFVNFTNDGKYFYAMTNERDAKFMDLYRY 176

Query: 377 KKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                +  L+ ++      +  S  GR +  S+       S  Y +D N R         
Sbjct: 177 DAKTYERELVFKNELGFNISEVSKDGRFVSLSKTHTNR-DSDTYLLDFNKRIVKPTIISK 235

Query: 436 YASDPQ 441
           + S+P 
Sbjct: 236 H-SEPA 240



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 89/264 (33%), Gaps = 22/264 (8%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           + +  +    + L +  + G      T       F   FS N + +   + D   I  +Y
Sbjct: 24  TSTDRTPTPADKLQITQQAGQQYDAQTFFETTTYFGSSFSENGESILIGS-DQSGIFNLY 82

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLT 298
            +D         +  F+       +  N  R L++          ++  +L       +T
Sbjct: 83  KLDAATGAQS-PLTTFKDTTYPVSWFPNDDRVLLTQDNAGNELYHLFVRELDGK----IT 137

Query: 299 N-TLFINISA---SYSPDSSQI-VFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDP 352
           + T      A   +++ D        ++R+ K   LY   +   + + +    E  +   
Sbjct: 138 DITPGDETRAGFVNFTNDGKYFYAMTNERDAKFMDLYRYDAKTYE-RELVFKNELGFNIS 196

Query: 353 VWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIF 406
             S  G  ++ +K  +       ++  +    +        E +N    T+S  G +L +
Sbjct: 197 EVSKDGRFVSLSKTHTNRDSDTYLLDFNKRIVKPTIISKHSEPANYNPMTFSADGSALYY 256

Query: 407 SRKKDGDTGSKLYSIDLNGRNETL 430
           S    G+  S+++  D+     +L
Sbjct: 257 STDAKGEF-SQVWKYDIATGEHSL 279



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 67/174 (38%), Gaps = 15/174 (8%)

Query: 203 IRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
              ++   +   + P  FS +   + Y+T    +  +V+  D         + +  ++  
Sbjct: 230 PTIISKHSEPANYNPMTFSADGSALYYSTDAKGEFSQVWKYDIATGEHSLAVKDDWNVSF 289

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFES 320
              FS +G+  +  V  D +  I  +D ++    +L      +  + ++S D   + F  
Sbjct: 290 -VYFSESGRYRVSGVNADASTKISILDTKTGKALKLPQLPDGDLRNVNFSKDEQTLAFYI 348

Query: 321 DREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSG 368
           + +     L+V Q      K+++Q       +P  +P  DL+A     F  F G
Sbjct: 349 NSDTSPSNLFVWQLGTDSVKQLTQ-----ALNPKINPD-DLVASEVVRFKSFDG 396



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 50/132 (37%), Gaps = 8/132 (6%)

Query: 319 ESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            +DR      +L + Q  G      +  +  +YF   +S  G+ I         F +  +
Sbjct: 25  STDRTPTPADKLQITQQAGQQYDAQTFFETTTYFGSSFSENGESILIGSDQSGIFNLYKL 84

Query: 377 KKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                 +  L    +   P +W P+   ++ ++   G+    L+  +L+G+   +  TP 
Sbjct: 85  DAATGAQSPLTTFKDTTYPVSWFPNDDRVLLTQDNAGNELYHLFVRELDGKITDI--TPG 142

Query: 436 YASDPQWVGFMD 447
             +     GF++
Sbjct: 143 DETR---AGFVN 151


>gi|159489584|ref|XP_001702777.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158280799|gb|EDP06556.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 189

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 64/198 (32%), Gaps = 12/198 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ Q++   +   +  LR +   T   R    +      + A  F+
Sbjct: 1   LQGHKGPVTALAFSPDGQQL--MSGGSDGQLRAWDPATGDCRCSLTLKGHDMDVHAVAFA 58

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                 + +   D  + ++ +         L   +      +YSPD  Q+       G++
Sbjct: 59  PGSAEQVATCSDDMTVKLWDLGSGGTCARTLKGHIHWTTCLAYSPDGKQLA----SGGRD 114

Query: 327 Q-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             +++          ++    A+     W P G  +A    +G    + V+     +   
Sbjct: 115 NAVWLWDPASGQGTALAGGLGATVVSLAWHPSGKQLA---SAGADRTVRVIDVAARKVVQ 171

Query: 386 LVEDSNL--QAPTWSPSG 401
            ++  +       +SP G
Sbjct: 172 TLDLGSDPVTCVQYSPDG 189


>gi|281350564|gb|EFB26148.1| hypothetical protein PANDA_000136 [Ailuropoda melanoleuca]
          Length = 408

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 138 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 197

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 198 RGHQNWVYSCAFSPDSSMLC---SVGASKAVFLWDMDKYAMIRKLEGHHHDVVACDFSPD 254

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 255 GALLATASYDT---RVYLWDPHTGD--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 309

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 310 GLHVA---SLADDKMVRFWRIDED 330



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 80/259 (30%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++           R +  T + D               ++ VS S   
Sbjct: 138 RIKIWDVYTGKLLL--NLVDHTEVVRDL--TFAPD-------------GSLILVSASRDK 180

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L D   
Sbjct: 181 TL---RVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSMLCSV----GASKAVFLWDMDK 232

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + ++  D  +               
Sbjct: 233 YAMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYLW--DPHTGDILMEFGHLFPPPT 289

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   +   +D +   + + +  +     +++          
Sbjct: 290 PIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 344

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 345 AFSTDGSVLAAGTHDGSVY 363



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 32/99 (32%), Gaps = 4/99 (4%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 136 NGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 195

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +L    N   +  +SP    L             L+ +D
Sbjct: 196 VLRGHQNWVYSCAFSPDSSML---CSVGASKAVFLWDMD 231


>gi|145597082|ref|YP_001161379.1| hypothetical protein Strop_4573 [Salinispora tropica CNB-440]
 gi|145306419|gb|ABP57001.1| hypothetical protein Strop_4573 [Salinispora tropica CNB-440]
          Length = 380

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 93/316 (29%), Gaps = 49/316 (15%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
           S+  S  +I     D   + +T   G           S      +        D    +Y
Sbjct: 81  SAAPSPSRIPAPADDWTQRPLTLPGGWLLVGATPTGTSYTPDGQRIIQQGYALDRTQDQY 140

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           ++      ++    SP+ +      YD      +  +D+   R  +         + P++
Sbjct: 141 VSTDEYDEIWA---SPSGEVAGVVNYDRPGEFGLLDLDSGAVRWVR----TGQHTMMPQW 193

Query: 266 SSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           S +G R  +++  +      +  +            T  ++    +  D     F   R+
Sbjct: 194 SPDGSRIALTIFDKASGDRALGVLSATGGW-----QTFPVDTERYFCTD--YCYFTWTRD 246

Query: 324 GKEQLY---------------------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           G+E ++                     +   +     R    K        WSP G  + 
Sbjct: 247 GREVVWQQTDPTAPRSEAAPHIRRGVQLFSPDDGRPIRFLPIKGDPTGPWSWSPDGQRVV 306

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                G +    +++      R+L   ++ +A  W P  R L            ++  ID
Sbjct: 307 VKGPQGPE----IVEVATG--RVLGPTASAEA-AWGPDNRLLY-----QDRLTGEMVLID 354

Query: 423 LNGRNETLINTPAYAS 438
           L+GR+      P    
Sbjct: 355 LDGRDLVRQALPGEVG 370


>gi|32473597|ref|NP_866591.1| WD repeat-containing protein [Rhodopirellula baltica SH 1]
 gi|32398277|emb|CAD78372.1| putative WD-repeat containing protein [Rhodopirellula baltica SH 1]
          Length = 930

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 78/209 (37%), Gaps = 13/209 (6%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            +S  L  +  +  G  + +L  +  DG+ ++ L   RD +L+   FSP+ +++A A YD
Sbjct: 193 GDSTQLLAASGLTGGYGQATLFHV-ADGSVLKELVGHRD-VLYAAEFSPDGKRIATAGYD 250

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +    + + DT      + +      I    FS +G   LIS   DE + ++ V     
Sbjct: 251 RK----ILIWDTSTGEVVQELLGHNGAIFGLAFSPDGT-LLISACADETVKVWEV-ATGQ 304

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ----KRISQDKEAS 348
             + L+          +S D   ++     + + +++ + S          +     E+ 
Sbjct: 305 RLDTLSQPEGEVNRVLFSKDGRWML-AGGADNRLRVWKLVSKTEAAINPIVQTRFVDESP 363

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                 +P G  +     +G    +    
Sbjct: 364 ISGMALTPDGRGLVIVSEAGNAKVLRTDD 392



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 70/224 (31%), Gaps = 12/224 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  ++  A+       +  L         K +   R ++ A  FS +GKR       
Sbjct: 191 FSGDSTQLLAASGLTGGYGQATLFHVADGSVLKELVGHRDVLYAAEFSPDGKRIA---TA 247

Query: 279 DEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                I   D  +    + L          ++SPD + ++        E + V +     
Sbjct: 248 GYDRKILIWDTSTGEVVQELLGHNGAIFGLAFSPDGTLLI---SACADETVKVWEVATGQ 304

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAP- 395
           +       E      ++S  G  +             ++ K  +    +V+     ++P 
Sbjct: 305 RLDTLSQPEGEVNRVLFSKDGRWMLAGGADNRLRVWKLVSKTEAAINPIVQTRFVDESPI 364

Query: 396 ---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                +P GR L+   +       +     + G  E L  TP+ 
Sbjct: 365 SGMALTPDGRGLVIVSEAGNAKVLRTDDWSVVGAMEPLGETPSD 408


>gi|300925512|ref|ZP_07141388.1| hypothetical protein HMPREF9548_03582 [Escherichia coli MS 182-1]
 gi|301325388|ref|ZP_07218887.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|300418386|gb|EFK01697.1| hypothetical protein HMPREF9548_03582 [Escherichia coli MS 182-1]
 gi|300847788|gb|EFK75548.1| conserved hypothetical protein [Escherichia coli MS 78-1]
 gi|320201283|gb|EFW75864.1| hypothetical protein YidR [Escherichia coli EC4100B]
          Length = 416

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +    D 
Sbjct: 310 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 364

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 365 RIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW 403



 Score = 36.9 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 54/152 (35%), Gaps = 32/152 (21%)

Query: 290 QSNATERLT----NTLFINISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRI 341
           Q  A +++T    N L  N + +++PDS  +VF+    G     E +  +  +  + + I
Sbjct: 9   QDRAMKQITFAPRNHLLTNTN-TWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVI 67

Query: 342 SQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMK--------KDGSQERLLVEDSNL 392
            +  + ++   V   P+ +   F                       +G +   L +  ++
Sbjct: 68  YRASQGAHVGVVTVHPKSEKYVFIHGPENPDETWHYDFHHRRGVIAEGGKMSNL-DAMDI 126

Query: 393 QAP-------------TWSPSGRSLIFSRKKD 411
            AP              +SP+G  + F+    
Sbjct: 127 TAPYTPGALRGGSHVHVFSPNGEMVSFTYNDH 158


>gi|206576272|ref|YP_002235893.1| hypothetical protein KPK_0008 [Klebsiella pneumoniae 342]
 gi|206565330|gb|ACI07106.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
          Length = 408

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 57/162 (35%), Gaps = 23/162 (14%)

Query: 280 EAMDIYSVDLQSNATERLTNTLF------INISASY---SPDSSQIVFES-DREGKEQLY 329
                        +  RLT T        +N+   +   +P ++ I F   D  G  QL+
Sbjct: 255 GTATTMPAPPAGVSQRRLTFTHHRRYPGLVNVPRHWVRANPQATAIAFLMCDDAGVVQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++   G + ++++           W P G+ + F         I            L + 
Sbjct: 315 LISPQGGEPRQLTYHASGIQSAFNWHPSGEWLGFVLED----RIACCHAGTGDITFLTK- 369

Query: 390 SNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +  AP+     +SP G+ + +  + DG    +L+ +   GR
Sbjct: 370 VHAHAPSADAIVFSPDGKQIAWMEEVDGYR--QLW-VTQTGR 408



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 3/95 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++   G   R LT     I     + P+ + + +     ED +      T       
Sbjct: 312 QLWLISPQGGEPRQLTYHASGIQSAFNWHPSGEWLGFV---LEDRIACCHAGTGDITFLT 368

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           ++        A  FS +GK+     + D    ++ 
Sbjct: 369 KVHAHAPSADAIVFSPDGKQIAWMEEVDGYRQLWV 403



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  +++++L+  +     +   +   +  A  +  +G+     ++   
Sbjct: 295 PQATAIAFLMCDDAGVVQLWLISPQGGEPRQLTYHASGIQSAFNWHPSGEWLGFVLE--- 351

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I      +     LT       SA    +SPD  QI +  + +G  QL+V 
Sbjct: 352 -DRIACCHAGTGDITFLTKVHAHAPSADAIVFSPDGKQIAWMEEVDGYRQLWVT 404


>gi|195477589|ref|XP_002100251.1| GE16263 [Drosophila yakuba]
 gi|194187775|gb|EDX01359.1| GE16263 [Drosophila yakuba]
          Length = 361

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 83/224 (37%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 62  YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 117

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + ++ +     + + L          +++P S+ IV  S
Sbjct: 118 SDVAWSSD-SRLLVSGSDDKTLKVWELS-TGKSLKTLKGHSNYVFCCNFNPQSNLIVSGS 175

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 176 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 230

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 231 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 271


>gi|254254504|ref|ZP_04947821.1| Tol biopolymer transport system periplasmic component [Burkholderia
           dolosa AUO158]
 gi|124899149|gb|EAY70992.1| Tol biopolymer transport system periplasmic component [Burkholderia
           dolosa AUO158]
          Length = 470

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 86/266 (32%), Gaps = 21/266 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYD 232
           +  L     V  G   + L + D     +  L+ S  +I       FSP+ + +A+    
Sbjct: 44  TGKLVYHSYVKYGDGTSQLFLYDFSAHTLTQLSKSTWRITDPMNGVFSPDGKWLAFMGIA 103

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +     V+++       P  + N         P+FS++GK  +     D      S    
Sbjct: 104 NG-AWNVFMLQLGAGTPPVNLTNSSGATRNEDPKFSTDGKSLVFKQNGDVKQGTLSYTSA 162

Query: 291 S---NATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                +   LTN            +PD+S + + +       L                 
Sbjct: 163 GPVFTSVVSLTNAPAGAEYSMPFLAPDASAVYYATGAGANMGLMKRTLATGATAVFDHPA 222

Query: 346 EASYFDPVWSPQGDLI-AFTKFSGEKFAIG--VMKKDGSQERLLVED--SNLQAPTWSP- 399
               + P     G +  A  K +G+   I         + E L + D  SN   P  +P 
Sbjct: 223 GLQTYYPTVRADGKVFYARWKDAGQADQIYAKTADPASTPESLPINDCMSNNSDP--APV 280

Query: 400 SGR-SLIFSRKKDGDTGSKLYSIDLN 424
           SG   L FS    G  G +LY  D+ 
Sbjct: 281 SGTNYLFFSSTTAG--GYQLYVGDVT 304


>gi|298244871|ref|ZP_06968677.1| WD40 repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297552352|gb|EFH86217.1| WD40 repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 493

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 83/218 (38%), Gaps = 30/218 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR---ALISV 276
           SP+ + +A + +       +++ + +     K + +F   +    +S +       +   
Sbjct: 285 SPDDKYIAASYHAYGANNPLFIWNVKDGTLFKTLYDFPHGLTGLSWSPDSASLVTLVYPS 344

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----LYVMQ 332
            +D  +    +   +N   ++        + S+SPDS ++    D EG       + ++ 
Sbjct: 345 AQDAQISTAII-WNTNTWTQVWQRP-NTRNVSWSPDSQRLA-VVDGEGATGMGIAIQLVN 401

Query: 333 SNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDS 390
           ++     K++  ++  +  +  WSP G  I          A+G+   D S   +L     
Sbjct: 402 AHTGQAIKQLKAERGITSIN--WSPDGSRIEVE-------AVGLQILDASNGSILYTFGE 452

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +    TWSP+G+ +           S++  +  + + +
Sbjct: 453 HGYNGTWSPNGKYIA---------SSQIVIVTGDDKKQ 481



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 99/298 (33%), Gaps = 63/298 (21%)

Query: 190 KNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           + +L   D   GA+        + +L +  +SP+ + +           ++Y+ D +  +
Sbjct: 184 RTTLTSWDAKTGAHKLTYQTPGETLLSDIAWSPDGKNLLVVAQS-----KIYVFDAQTTQ 238

Query: 249 APKRIGNFRSMIL--AP---------------------------RFSSNGKRALISVQKD 279
             + I          AP                             S + K    S    
Sbjct: 239 RIRIITLPNGTASTNAPLLSSPTPHGTFYSNLVSLSGGSYFSDLTLSPDDKYIAASYHAY 298

Query: 280 EAMD-IYSVDLQSNATER-LTNTLFINISASYSPDSSQ---IVFESDREGKEQLYVMQSN 334
            A + ++  +++     + L +        S+SPDS+    +V+ S ++ +    ++  N
Sbjct: 299 GANNPLFIWNVKDGTLFKTLYDFPHGLTGLSWSPDSASLVTLVYPSAQDAQISTAIIW-N 357

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---SGEKFAIGVMKK-DGSQERLLVEDS 390
            +   ++ Q    +  +  WSP    +A       +G   AI ++    G   + L  + 
Sbjct: 358 TNTWTQVWQRP--NTRNVSWSPDSQRLAVVDGEGATGMGIAIQLVNAHTGQAIKQLKAER 415

Query: 391 NLQAPTWSPSGRSL----IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            + +  WSP G  +    +  +  D   GS LY+   +G N              W  
Sbjct: 416 GITSINWSPDGSRIEVEAVGLQILDASNGSILYTFGEHGYN------------GTWSP 461



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 76/262 (29%), Gaps = 44/262 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ +++A     +   L  +   T   +   +     +++    +S +GK  L+  Q 
Sbjct: 171 WSPDGKRLA--ASLNRTTLTSWDAKTGAHKLTYQ-TPGETLLSDIAWSPDGKNLLVVAQ- 226

Query: 279 DEAMDIYSVDLQSNATERL---------TNTL---------------------FINISAS 308
                IY  D Q+    R+         TN                             +
Sbjct: 227 ---SKIYVFDAQTTQRIRIITLPNGTASTNAPLLSSPTPHGTFYSNLVSLSGGSYFSDLT 283

Query: 309 YSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL---IAFT 364
            SPD   I       G    L++         +   D         WSP       + + 
Sbjct: 284 LSPDDKYIAASYHAYGANNPLFIWNVKDGTLFKTLYDFPHGLTGLSWSPDSASLVTLVYP 343

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDL 423
                + +  ++  + +    + +  N +  +WSP  + L     +     G  +  ++ 
Sbjct: 344 SAQDAQISTAII-WNTNTWTQVWQRPNTRNVSWSPDSQRLAVVDGEGATGMGIAIQLVNA 402

Query: 424 -NGRNETLINTPAYASDPQWVG 444
             G+    +      +   W  
Sbjct: 403 HTGQAIKQLKAERGITSINWSP 424



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 75/230 (32%), Gaps = 51/230 (22%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YS 310
            +   M     +S +GKR   S+ +     + S D ++    +LT         S   +S
Sbjct: 160 SDIYDMDYGLHWSPDGKRLAASLNR---TTLTSWDAKTG-AHKLTYQTPGETLLSDIAWS 215

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---------------------- 348
           PD   ++  +      ++YV  +  + + RI      +                      
Sbjct: 216 PDGKNLLVVAQ----SKIYVFDAQTTQRIRIITLPNGTASTNAPLLSSPTPHGTFYSNLV 271

Query: 349 -------YFDPVWSPQGDLIAFT-KFSGEKFAIGVMK-KDGSQERLLVE-DSNLQAPTWS 398
                  + D   SP    IA +    G    + +   KDG+  + L +    L   +WS
Sbjct: 272 SLSGGSYFSDLTLSPDDKYIAASYHAYGANNPLFIWNVKDGTLFKTLYDFPHGLTGLSWS 331

Query: 399 PSGRS---LIFSRKKDGDTGSK-LYSIDLNGRNETLINTPAYASDPQWVG 444
           P   S   L++   +D    +  +++ +   +     NT     +  W  
Sbjct: 332 PDSASLVTLVYPSAQDAQISTAIIWNTNTWTQVWQRPNT----RNVSWSP 377


>gi|288932900|ref|YP_003436959.1| hypothetical protein Kvar_0012 [Klebsiella variicola At-22]
 gi|288887629|gb|ADC55947.1| conserved hypothetical protein [Klebsiella variicola At-22]
          Length = 421

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 57/162 (35%), Gaps = 23/162 (14%)

Query: 280 EAMDIYSVDLQSNATERLTNTLF------INISASY---SPDSSQIVFES-DREGKEQLY 329
                        +  RLT T        +N+   +   +P ++ I F   D  G  QL+
Sbjct: 268 GTATTMPAPPAGVSQRRLTFTHHRRYPGLVNVPRHWVRANPQATAIAFLMCDDAGVVQLW 327

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++   G + ++++           W P G+ + F         I            L + 
Sbjct: 328 LISPQGGEPRQLTYHASGIQSAFNWHPSGEWLGFVLED----RIACCHAGTGDITFLTK- 382

Query: 390 SNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +  AP+     +SP G+ + +  + DG    +L+ +   GR
Sbjct: 383 VHAHAPSADAIVFSPDGKQIAWMEEVDGYR--QLW-VTQTGR 421



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 3/95 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++   G   R LT     I     + P+ + + +     ED +      T       
Sbjct: 325 QLWLISPQGGEPRQLTYHASGIQSAFNWHPSGEWLGFV---LEDRIACCHAGTGDITFLT 381

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           ++        A  FS +GK+     + D    ++ 
Sbjct: 382 KVHAHAPSADAIVFSPDGKQIAWMEEVDGYRQLWV 416



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  +++++L+  +     +   +   +  A  +  +G+     ++   
Sbjct: 308 PQATAIAFLMCDDAGVVQLWLISPQGGEPRQLTYHASGIQSAFNWHPSGEWLGFVLE--- 364

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I      +     LT       SA    +SPD  QI +  + +G  QL+V 
Sbjct: 365 -DRIACCHAGTGDITFLTKVHAHAPSADAIVFSPDGKQIAWMEEVDGYRQLWVT 417


>gi|254242317|ref|ZP_04935639.1| hypothetical protein PA2G_03058 [Pseudomonas aeruginosa 2192]
 gi|126195695|gb|EAZ59758.1| hypothetical protein PA2G_03058 [Pseudomonas aeruginosa 2192]
          Length = 335

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 18/182 (9%)

Query: 269 GKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESD 321
           G R +        D + ++Y  D +S +T +L N    NI     A +SPD   + F   
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQL-NQPGWNIEDPMNAHFSPDGRYLTFMGR 103

Query: 322 REGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           + G   ++     G+     ++        DP +S  G  +        + A  +   DG
Sbjct: 104 QNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQVVLKHEGDIRLATLIFNGDG 163

Query: 381 SQE----RLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           S      + +  D        P  +PSG+ ++++         ++   +L     + + T
Sbjct: 164 SVGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYAT--GAGDSLRVVRRNLENGQVSALAT 221

Query: 434 PA 435
           PA
Sbjct: 222 PA 223



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 60/188 (31%), Gaps = 14/188 (7%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQK 278
             ++ Y +Y +       L          R  N     +       FS +G+      ++
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIEDPMNAHFSPDGRYLTFMGRQ 104

Query: 279 DEAMDIYSVDLQSNA-TERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNG- 335
           + A  +++  +        LT      N    +S D  Q+V + + + +    +   +G 
Sbjct: 105 NGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQVVLKHEGDIRLATLIFNGDGS 164

Query: 336 ---SDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--- 388
              S  K ++ D  ++    P  +P G  + +   +G+   +     +  Q   L     
Sbjct: 165 VGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYATGAGDSLRVVRRNLENGQVSALATPAA 224

Query: 389 DSNLQAPT 396
                 P 
Sbjct: 225 GGRDYYPV 232



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 75/278 (26%), Gaps = 15/278 (5%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH                     L     +  G   ++L + D    + R L      I 
Sbjct: 25  AHAACTANLALQPASSLPALGGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIE 84

Query: 215 --FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKR 271
                 FSP+ + + +          V+       +AP  +          P+FS +G++
Sbjct: 85  DPMNAHFSPDGRYLTFMG-RQNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQ 143

Query: 272 ALISVQKDEAMDIYSVDLQSN---ATERLTNTLFINIS---ASYSPDSSQIVFESDREGK 325
            ++  + D  +     +   +   +  +       +        +P    +V+ +     
Sbjct: 144 VVLKHEGDIRLATLIFNGDGSVGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYATGAGDS 203

Query: 326 EQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---KKDGS 381
            ++            + +       + PV                   + ++      G+
Sbjct: 204 LRVVRRNLENGQVSALATPAAGGRDYYPVVRDYTAYFLSRTQPAGNDQLAMVVPNSPPGT 263

Query: 382 QERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKL 418
              L +          +P +   LIFS      T S L
Sbjct: 264 PAILPLNHCQGDNSDAAPVNEDYLIFSSTSFDPTYSLL 301


>gi|327302100|ref|XP_003235742.1| WD repeat protein [Trichophyton rubrum CBS 118892]
 gi|326461084|gb|EGD86537.1| WD repeat protein [Trichophyton rubrum CBS 118892]
          Length = 576

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +++     + +   +FSP+   +A  + D      + + +T             + I
Sbjct: 180 YKEKFVLKGHQRGVSAVKFSPDGTMLASCSAD----ATIKIWNTATGTLVHTFEGHLAGI 235

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVF 318
               +S +G+    S   D+++ ++  D+ +                S ++SP  + +V 
Sbjct: 236 STISWSPDGETIA-SGSDDKSIRLW--DVMTGKLYPNPFVGHHNYVYSIAFSPKGNMLVS 292

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E +++     +   R             +   G LI      G    I +   
Sbjct: 293 GSY---DEAVFIWDVRSARIMRSLPAHSDPVAGVDFVRDGTLIVSCAGDG---LIRIWDS 346

Query: 379 DGSQ-ERLLVEDSNLQAPT--WSPSGRSLI 405
              Q  R LV + N    +  +SP+G+ ++
Sbjct: 347 ASGQCLRTLVHEDNPPVASVKFSPNGKFIL 376



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 57/179 (31%), Gaps = 11/179 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR-AP 250
           ++ + +     + +        +    +SP+ + +A  + D      + L D    +  P
Sbjct: 213 TIKIWNTATGTLVHTFEGHLAGISTISWSPDGETIASGSDDK----SIRLWDVMTGKLYP 268

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                  + + +  FS  G   + S   DEA+ I+ V   +     L           + 
Sbjct: 269 NPFVGHHNYVYSIAFSPKGNMLV-SGSYDEAVFIWDV-RSARIMRSLPAHSDPVAGVDFV 326

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            D + IV  +   G   + +  S      R +  +         +SP G  I      G
Sbjct: 327 RDGTLIVSCA---GDGLIRIWDSASGQCLRTLVHEDNPPVASVKFSPNGKFILAWSLDG 382



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 10/132 (7%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD + +   S       + +  +         +   A      WSP G+ IA      
Sbjct: 198 FSPDGTMLASCS---ADATIKIWNTATGTLVHTFEGHLAGISTISWSPDGETIASGSDDK 254

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                 VM         +   + + +  +SP G  L+      G     ++  D+  R+ 
Sbjct: 255 SIRLWDVMTGKLYPNPFVGHHNYVYSIAFSPKGNMLV-----SGSYDEAVFIWDV--RSA 307

Query: 429 TLINTPAYASDP 440
            ++ +    SDP
Sbjct: 308 RIMRSLPAHSDP 319


>gi|312883679|ref|ZP_07743403.1| hypothetical protein VIBC2010_03712 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368652|gb|EFP96180.1| hypothetical protein VIBC2010_03712 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 1126

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 87/248 (35%), Gaps = 32/248 (12%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +    L     SP+ + +A+         +++L+D+    +   I N         +SS
Sbjct: 30  NNEPLWLRNTALSPDGKYLAFTYQS-----KIFLVDS-TGGSATPITNGDFYPHHLVWSS 83

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDR 322
           + K    + Q     D++++++ +N   R T   + +I AS++ +   ++F      S R
Sbjct: 84  DNKTLAFAAQPYGHDDVFTLEIGTNQITRHTYNSWDDIPASFTNNGQGLLFNTSRVTSHR 143

Query: 323 E--------GKEQLYVMQSNG-SDQKRISQDKEASYFDPVW------SPQGDLIAFTKFS 367
           +           QLY +          ++   + + ++         SP  D  A+ K  
Sbjct: 144 QDFYNLSRLHFSQLYHIDLKSQRAAVAMTLPAKNAMWNQSTSQLLYNSPHKDQ-AYRKHQ 202

Query: 368 GE--KFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  I +  K  +    L  +    + P W+       +  ++ GD    ++  DL 
Sbjct: 203 QSFAVPNIWLFDKATNTHTRLTNERIAAEKPVWNSEQNGFFYLSEQSGDF--NVWFYDLA 260

Query: 425 GRNETLIN 432
                 + 
Sbjct: 261 TSQTKQLT 268



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 90/285 (31%), Gaps = 79/285 (27%)

Query: 218 RFSPNQQKVAYATYDDEDILR--------------VYLMDTRIDRAPKRIGNFRSMILAP 263
            FSP +Q   Y+    + +                +Y  +T+  +  K I    +     
Sbjct: 313 NFSPKEQNYWYSRLASDFVPSEQNVEEVLLTSYGDLYAFNTKKSQF-KAITQTITEEKDV 371

Query: 264 RFSSNGKRALISVQKDEAMDIY----SVD--LQSNATER-----LTNTLFINISASYSPD 312
            ++ +G  ++ S  ++    IY    ++D  L S++  R     L +         +SPD
Sbjct: 372 SYTPDGYGSVYSALRNGFWGIYQSYSTIDKELLSSSIIREESPLLISDKHNLTQPQFSPD 431

Query: 313 SSQIVFE-------------SDREGK---------------------------------- 325
            +++ F              SD+                                     
Sbjct: 432 GTKLAFVVDGKALHIIHFGSSDKHQSEAESEKNNVVQQQVNQQENDMMVTVEPPASQEEA 491

Query: 326 ---EQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKD 379
                ++  + +   ++ IS +           WSP  + +A     S   F I V+  +
Sbjct: 492 QIEPDIWSGELSDLGKELISAESYIQGIELAFAWSPDSNQLAVNFLTSPHLFQIRVVDVN 551

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           G+   +     +  AP WS  G  L +   + G+  S  ++++  
Sbjct: 552 GNIAHVSENGFDNFAPEWSKDGNILFWQTTQSGERSSDGFAVNAT 596



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 80/224 (35%), Gaps = 32/224 (14%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  ++ + GDFN  + F   +         L      G  +R LT   +  L    FS  
Sbjct: 242 FFYLSEQSGDFN--VWFYDLATSQTKQLTFLK-----GHPVRDLTADNENNL---SFSYK 291

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS---NGKRALISVQKD 279
             ++       +   ++ +         +   N+    LA  F     N +  L++   D
Sbjct: 292 G-ELYRLNNGAKSPEKIAIQINNFSPKEQ---NYWYSRLASDFVPSEQNVEEVLLTSYGD 347

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY---------- 329
               +Y+ + + +  + +T T+      SY+PD    V+ + R G   +Y          
Sbjct: 348 ----LYAFNTKKSQFKAITQTITEEKDVSYTPDGYGSVYSALRNGFWGIYQSYSTIDKEL 403

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +  S   ++  +    + +   P +SP G  +AF    G+   I
Sbjct: 404 LSSSIIREESPLLISDKHNLTQPQFSPDGTKLAFV-VDGKALHI 446



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 85/289 (29%), Gaps = 76/289 (26%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE------------DILRVYLMDTRID 247
           G N                F+ N Q + + T                   ++Y +D +  
Sbjct: 106 GTNQITRHTYNSWDDIPASFTNNGQGLLFNTSRVTSHRQDFYNLSRLHFSQLYHIDLKSQ 165

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEA----------MDIYSVDLQSNATER 296
           RA   +       +   ++ +  + L  S  KD+A           +I+  D  +N   R
Sbjct: 166 RAAVAMTLPAKNAM---WNQSTSQLLYNSPHKDQAYRKHQQSFAVPNIWLFDKATNTHTR 222

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE---------- 346
           LTN         ++ + +   + S++ G   ++      S  K+++  K           
Sbjct: 223 LTNERIAAEKPVWNSEQNGFFYLSEQSGDFNVWFYDLATSQTKQLTFLKGHPVRDLTADN 282

Query: 347 ------------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--------QERLL 386
                           +   SP+   I    FS ++      +            +E LL
Sbjct: 283 ENNLSFSYKGELYRLNNGAKSPEKIAIQINNFSPKEQNYWYSRLASDFVPSEQNVEEVLL 342

Query: 387 VEDSNLQA--------------------PTWSPSGRSLIFSRKKDGDTG 415
               +L A                     +++P G   ++S  ++G  G
Sbjct: 343 TSYGDLYAFNTKKSQFKAITQTITEEKDVSYTPDGYGSVYSALRNGFWG 391



 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 9/72 (12%), Positives = 24/72 (33%), Gaps = 2/72 (2%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I     +SP+  ++A        + ++ ++D  ++     +        AP +S +G  
Sbjct: 518 GIELAFAWSPDSNQLAVNFLTSPHLFQIRVVD--VNGNIAHVSENGFDNFAPEWSKDGNI 575

Query: 272 ALISVQKDEAMD 283
                 +     
Sbjct: 576 LFWQTTQSGERS 587


>gi|15804288|ref|NP_290327.1| hypothetical protein Z5185 [Escherichia coli O157:H7 EDL933]
 gi|15833883|ref|NP_312656.1| hypothetical protein ECs4629 [Escherichia coli O157:H7 str. Sakai]
 gi|189403681|ref|ZP_03007180.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|217325406|ref|ZP_03441490.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|12518530|gb|AAG58891.1|AE005600_9 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|13364104|dbj|BAB38052.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|189369525|gb|EDU87941.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           EC4501]
 gi|217321627|gb|EEC30051.1| conserved hypothetical protein [Escherichia coli O157:H7 str.
           TW14588]
 gi|326337257|gb|EGD61092.1| Uncharacterized protein YidR [Escherichia coli O157:H7 str. 1044]
          Length = 416

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGIVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLGN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL- 362

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 363 ---GNRIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +       I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--GNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 403



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 49/151 (32%), Gaps = 30/151 (19%)

Query: 290 QSNATERLT----NTLFINISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRI 341
           Q  A +++T    N L  N + +++PDS   VF+    G     E +  +  +  + + I
Sbjct: 9   QDRAMKQITFAPRNHLLTNTN-TWTPDSQWPVFDVRPSGASFTGETIERVNIHTGEVEVI 67

Query: 342 SQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMK----------------KDGSQER 384
            +  + ++   V   P+ +   F                               D     
Sbjct: 68  YRVSQGAHVGVVTVHPKSEKYVFIHGPENPHETWHYDFHHRRGVIVEGGKMNNLDAMDIT 127

Query: 385 LLVEDSNLQAPT----WSPSGRSLIFSRKKD 411
           +      L+  +    +SP+G  + F+    
Sbjct: 128 VPYTSGALRGGSHVHVFSPNGEMVSFTYNDH 158


>gi|294632914|ref|ZP_06711473.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292830695|gb|EFF89045.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 422

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 74/246 (30%), Gaps = 32/246 (13%)

Query: 218 RFSPNQQKVAYATYD--------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             +P+ + +   +              +  Y +                 ++    + +G
Sbjct: 19  AITPDGRTLYSVSAGLQLSSLAVVPGTITAYRIGDDGVLRETAETTAPGPVIGAAVTPDG 78

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISAS------YSPDSSQIVFESDR 322
           KR  ++V       + S D+ S+    LT          S       SPD+  +   +  
Sbjct: 79  KRLFVTVSTGSTGQVLSYDIASSGA--LTPTGAAPAAVPSGISQVVISPDARHLYVSNFL 136

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFD-----PVWSPQGDLIAFTKFSGEKFAIGVMK 377
                 + +  +      ++   E          P  SP G  +          +  V+ 
Sbjct: 137 TNSMSSFAIAPDAG----LTSIGEPLATGAQPAIPSISPDGRYLYVGNEGSGDLSGYVIG 192

Query: 378 KDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           KDG+            +    P +SP  R L +     G+T S  + +  +GR   L  +
Sbjct: 193 KDGALTPAPGSPYASGATPHGPIFSPDSRRL-YVANASGNTISG-WQVGDDGRLSPLPGS 250

Query: 434 PAYASD 439
           P  + D
Sbjct: 251 PFASPD 256



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 66/204 (32%), Gaps = 31/204 (15%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRALI 274
           P  SP+ + + Y   +    L  Y++       P     + S      P FS + +R  +
Sbjct: 167 PSISPDGRYL-YVGNEGSGDLSGYVIGKDGALTPAPGSPYASGATPHGPIFSPDSRRLYV 225

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------------R 322
           +      +  + V        RL+       S   SPD +++V   D            +
Sbjct: 226 ANASGNTISGWQVGDDG----RLSPLPG---SPFASPDVARVVLSPDAKVLYAMTGAPRK 278

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            GK   + ++ +G     ++     +    ++   G     T   G       ++ DG  
Sbjct: 279 SGKVSSFAVRPDGG----LTPTGYPALDTGLFWHDGSNAFLTPNQGPA---AALRADG-D 330

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIF 406
            R L         +  P GR + +
Sbjct: 331 SRALTRTFTAAGSS-DPDGRVVRY 353


>gi|320655473|gb|EFX23408.1| hypothetical protein ECO7815_14517 [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
          Length = 408

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 258 SGTETTLPAPPRGIVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 317

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 318 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLGN----RIACAHAQSGEVEYLTE 373

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 374 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 407



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 296 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL- 354

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 355 ---GNRIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 407



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +       I   +    
Sbjct: 309 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--GNRIACAHAQSG 366

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 367 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 395


>gi|320180030|gb|EFW54972.1| hypothetical protein YidR [Shigella boydii ATCC 9905]
          Length = 416

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 72/203 (35%), Gaps = 41/203 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA----LISVQKDEAMD--IYSVDLQSNAT-----------E 295
           +GN     +    S  G++     ++ + +DEA         L    T            
Sbjct: 223 VGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKAAGEAPLSGTETTLPAPPRGVVQR 282

Query: 296 RLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT  +        N+   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 283 RLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 342

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I        +   L E      +  A  +SP G
Sbjct: 343 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAQNGEVEYLTENHANPPSADAVVFSPDG 398

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN 424
           + L +        G +L+S + +
Sbjct: 399 QWLAWME------GGQLWSTETD 415



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVF 318
                 I     Q+   E LT       SA    +SPD   + +
Sbjct: 364 N----RIACAHAQNGEVEYLTENHANPPSADAVVFSPDGQWLAW 403



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 36/100 (36%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +    D 
Sbjct: 310 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 364

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +  +  ++   +   N  S   A  FS +G+    
Sbjct: 365 RIACAHAQNGEVEYLTENHANPPSAD-AVVFSPDGQWLAW 403



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 30/151 (19%)

Query: 290 QSNATERLT----NTLFINISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRI 341
           Q  A +++T    N L  N + +++PDS  +VF+    G     E +  +  +  + + I
Sbjct: 9   QDRAMKQITFAPRNHLLTNTN-TWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVI 67

Query: 342 SQDKEASYFDPVW---------------SPQGDLIA-FTKFSGEKFAIGVM-KKDGSQER 384
            +  + ++   V                +P       F    G  F  G M   D     
Sbjct: 68  YRASQGAHVGVVTVHPKSEKYVFIHAPENPDKTWHYDFHHRRGVIFEGGKMSNLDAMDIT 127

Query: 385 LLVEDSNLQAPT----WSPSGRSLIFSRKKD 411
                  L+  +    +SP+G  + F+    
Sbjct: 128 APYTPGALRGGSHVHVFSPNGERVSFTYNDH 158


>gi|190574544|ref|YP_001972389.1| putative Beta propeller repeat-containing protein [Stenotrophomonas
           maltophilia K279a]
 gi|190012466|emb|CAQ46094.1| putative Beta propeller repeat protein [Stenotrophomonas
           maltophilia K279a]
          Length = 293

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 66/208 (31%), Gaps = 41/208 (19%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-ISVQKDEAM---DIYSVDLQ 290
              RV  +    +R    + + +   +    S +GK AL  S  +       DI+     
Sbjct: 18  SPSRVLQIVGPAERFAPGVASTQYDEIRLTLSPDGKTALWFSRNRPGGPGGYDIWVSRND 77

Query: 291 SNATERLT----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                  T    NT   +   ++S D   + F SDR G +        G D  R+S   +
Sbjct: 78  GQRWRPATPVPFNTPGRDFDPAFSADGRVVYFCSDRAGGQ-------GGDDLYRVSMGSD 130

Query: 347 ASY----------------FDPVWSPQGDLIAFTKFS---GEKFAIGVMKKDGSQER--- 384
             +                F P+ SP G  + F+           +      G   +   
Sbjct: 131 GRFGEPVNLGPAVNSVNDEFAPMLSPDGRTLLFSSDRAGGAGGHDLYSAAMIGGVAQPAQ 190

Query: 385 ----LLVEDSNLQAPTWSPSGRSLIFSR 408
                L   +     T+   GR+L+F+R
Sbjct: 191 PLPGNLNTAAQEFDATFLGDGRTLVFAR 218



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 60/170 (35%), Gaps = 21/170 (12%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP---SRDQILFEPRFSPNQQKV 226
             D  + + F S +   G     + V   DG   R  TP   +     F+P FS + + V
Sbjct: 49  SPDGKTALWF-SRNRPGGPGGYDIWVSRNDGQRWRPATPVPFNTPGRDFDPAFSADGRVV 107

Query: 227 AYATYDDE-----DILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQK 278
            + +         D+ RV +        P  +G   N  +   AP  S +G+  L S  +
Sbjct: 108 YFCSDRAGGQGGDDLYRVSMGSDGRFGEPVNLGPAVNSVNDEFAPMLSPDGRTLLFSSDR 167

Query: 279 DEAM---DIYSVDLQSN---ATERLT---NTLFINISASYSPDSSQIVFE 319
                  D+YS  +        + L    NT      A++  D   +VF 
Sbjct: 168 AGGAGGHDLYSAAMIGGVAQPAQPLPGNLNTAAQEFDATFLGDGRTLVFA 217



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 19/132 (14%)

Query: 308 SYSPDSSQ-IVFESDREGKEQ---LYVMQSNGSDQKRIS---QDKEASYFDPVWSPQGDL 360
           + SPD    + F  +R G      ++V +++G   +  +    +     FDP +S  G +
Sbjct: 47  TLSPDGKTALWFSRNRPGGPGGYDIWVSRNDGQRWRPATPVPFNTPGRDFDPAFSADGRV 106

Query: 361 IAFTKFS----GEKFAIGV-MKKDG--SQERLL---VEDSNLQ-APTWSPSGRSLIFSRK 409
           + F        G      V M  DG   +   L   V   N + AP  SP GR+L+FS  
Sbjct: 107 VYFCSDRAGGQGGDDLYRVSMGSDGRFGEPVNLGPAVNSVNDEFAPMLSPDGRTLLFSSD 166

Query: 410 K-DGDTGSKLYS 420
           +  G  G  LYS
Sbjct: 167 RAGGAGGHDLYS 178



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 12/90 (13%)

Query: 355 SPQGDLIAFTKFS----GEKFAIGVMKKDGSQERLLV-----EDSNLQAPTWSPSGRSLI 405
           SP G    +   +       + I V + DG + R               P +S  GR + 
Sbjct: 49  SPDGKTALWFSRNRPGGPGGYDIWVSRNDGQRWRPATPVPFNTPGRDFDPAFSADGRVVY 108

Query: 406 FSRKK-DGDTGSKLYSIDL--NGRNETLIN 432
           F   +  G  G  LY + +  +GR    +N
Sbjct: 109 FCSDRAGGQGGDDLYRVSMGSDGRFGEPVN 138


>gi|238765214|ref|ZP_04626144.1| Oligogalacturonide lyase [Yersinia kristensenii ATCC 33638]
 gi|238696542|gb|EEP89329.1| Oligogalacturonide lyase [Yersinia kristensenii ATCC 33638]
          Length = 284

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/236 (10%), Positives = 71/236 (30%), Gaps = 35/236 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           + P      +  +         +           I      +  P +   +        +
Sbjct: 45  WQPLTDWKKFHEFYFTKPCCRLMRVDLKTGESAVILQENQWLGHPIYRPYDDNTVAFCHE 104

Query: 278 KDEA---MDIYSVDLQSNATERL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ ++   +   ++ T+    +     + PD S +V+ S  +G     +Y 
Sbjct: 105 GPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYS 164

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMK 377
                 + ++++     S+    +   G L+                + I       V  
Sbjct: 165 ADPETLENRQLTSMPACSHLMSNY--DGTLLVGDGSDAPVDVQDDSGYKIENDPFLYVFN 222

Query: 378 K-DGSQERLLVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +G+Q R+   D++ +            P+++P  + ++F+    G     L ++
Sbjct: 223 LKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 278



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 64/182 (35%), Gaps = 30/182 (16%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILR-V 239
                 ++   + +++ DG+N+R + T +  +      + P+   + Y +Y      R +
Sbjct: 103 HEGPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFI 162

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDI------YSVD 288
           Y  D       +         L   +       +G  A + VQ D    I      Y  +
Sbjct: 163 YSADPETLENRQLTSMPACSHLMSNYDGTLLVGDGSDAPVDVQDDSGYKIENDPFLYVFN 222

Query: 289 LQSNATERLTNTLFINIS--------------ASYSPDSSQIVFESDREGKEQLYVMQSN 334
           L++    R+      + S               S++PD  QI+F SD  GK  LY+    
Sbjct: 223 LKNGTQHRVARH---DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATLP 279

Query: 335 GS 336
            S
Sbjct: 280 ES 281



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 9/117 (7%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF---AIGVMKKDGSQ 382
           +L  +     +   I Q+ +     P++ P   + +AF            + ++ +DGS 
Sbjct: 65  RLMRVDLKTGESAVILQENQW-LGHPIYRPYDDNTVAFCHEGPHDLVDARMWLINEDGSN 123

Query: 383 ERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPA 435
            R +    E  +     W P G +L++     G     +YS D     N  L + PA
Sbjct: 124 MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPA 180


>gi|159898283|ref|YP_001544530.1| hypothetical protein Haur_1759 [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159891322|gb|ABX04402.1| conserved hypothetical protein [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 463

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 19/141 (13%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  SP+ ++I +  +R     L+V   +G +++ ++Q+       P WSP    +A    
Sbjct: 154 ARVSPNGTKIAYLDNRT----LFVADRDGENRQALTQNVN---EAPRWSPDSTALAVVSG 206

Query: 367 SGEK---------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           S +            + V+  + +    L +      P WSP G+ L +     GD    
Sbjct: 207 SPDNRYPLACANDSQLIVVDLNSNSSTTLAQG---CQPAWSPDGKRLAYVSPTIGDINEG 263

Query: 418 LYSIDLNGRNETLINTPAYAS 438
             ++ L GR      TP  A 
Sbjct: 264 FNTVGLIGRQGQNGWTPVSAP 284



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/290 (17%), Positives = 94/290 (32%), Gaps = 56/290 (19%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +L V DRDG N + LT +   +   PR+SP+   +A  +    D               
Sbjct: 169 RTLFVADRDGENRQALTQN---VNEAPRWSPDSTALAVVS-GSPDNRYPLACANDSQLIV 224

Query: 251 KRIGNFRSMILA----PRFSSNGKRALISVQKDEAMD--IYSVDLQSNATER-------- 296
             + +  S  LA    P +S +GKR          ++    +V L     +         
Sbjct: 225 VDLNSNSSTTLAQGCQPAWSPDGKRLAYVSPTIGDINEGFNTVGLIGRQGQNGWTPVSAP 284

Query: 297 -----LTNTLFINISASYSPDSSQIV---FESDRE--GKEQLYVMQSNGSDQKRISQDKE 346
                  +   I  +  ++ D S +    F   R       +  +       K I    +
Sbjct: 285 VQNAAFPDPRRIFYAPFWNRDGSALYSFGFIGYRVLIDFSTIEQIDPINGGTKPIGLALD 344

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL------------LVEDSN--L 392
                   + +GD  A+     +   +  + + G+Q ++            LV+     +
Sbjct: 345 VQSASVRPTLRGDGAAYISLGAKGSPMLNLVRTGNQPQIVNYVDIPIEVSALVDPGTEFV 404

Query: 393 QAPTWSPSGRSLI--------FSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              TW+P+G  L         F+    G    +LY        +T ++TP
Sbjct: 405 SQATWAPAGEILALVVCANDGFACTPGGSGTIQLYD------PKTQLSTP 448



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 24/164 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R SPN  K+AY         R   +  R     + +   +++  APR+S +     +   
Sbjct: 155 RVSPNGTKIAYLDN------RTLFVADRDGENRQALT--QNVNEAPRWSPDSTALAVVSG 206

Query: 278 KDEAM---------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KE 326
             +            +  VDL SN++  L          ++SPD  ++ + S   G   E
Sbjct: 207 SPDNRYPLACANDSQLIVVDLNSNSSTTLAQG----CQPAWSPDGKRLAYVSPTIGDINE 262

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
               +   G   +       A   +  + P    I +  F    
Sbjct: 263 GFNTVGLIGRQGQNGWTPVSAPVQNAAF-PDPRRIFYAPFWNRD 305


>gi|91077142|ref|XP_971564.1| PREDICTED: similar to will die slowly [Tribolium castaneum]
 gi|270002042|gb|EEZ98489.1| hypothetical protein TcasGA2_TC000986 [Tribolium castaneum]
          Length = 343

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 77/207 (37%), Gaps = 13/207 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 44  YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 99

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + I+ +       + L          +++P S+ IV  S
Sbjct: 100 SDVAWSSD-SRLLVSASDDKTLKIWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 157

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 158 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 212

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLI 405
              + L++D N  +    +SP+G+ ++
Sbjct: 213 QCLKTLIDDDNPPVSFVKFSPNGKYIL 239


>gi|315919771|ref|ZP_07916011.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313693646|gb|EFS30481.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 837

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---DEAMDIY 285
             Y     L    M+         + +   ++  P    +G+  L S +K   ++   +Y
Sbjct: 180 CNYIAGGALAKLKMNGIWAEVETMLTDEEGVVRDPNLHFDGQHLLFSWKKSPKEDDFHLY 239

Query: 286 SVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGK---------EQLYVMQSNG 335
            +DL++   ++LT      +I   Y PD   I+F S R G            +Y+    G
Sbjct: 240 EMDLKTREIKQLTFGKGHADIEGIYLPD-DNILFNSTRCGSTVDCWFTEVSNMYLCDREG 298

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQ 382
              +++  D+  +   P     G  + +T++            +  M  DG+ 
Sbjct: 299 RYMRQVGFDQVHTVT-PTLLDDGR-VVYTRWDYNDRGQVWAQPLFQMNPDGTG 349


>gi|295638836|gb|ADG21975.1| Poc1 [Clytia hemisphaerica]
          Length = 463

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 79/224 (35%), Gaps = 10/224 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG + +SL V         Y        +    FSP+   +A  + D      V L   
Sbjct: 34  VSGSMDSSLMVFHFKPHMRAYRFVGHKDAITSVSFSPSGHLIASGSRDK----TVRLWVP 89

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +           + + +  FS +G+  L +   D+++ +++V  Q      LT  +   
Sbjct: 90  SVKGESTVFKAHMATVRSVDFSRDGQSLL-TSSDDKSLKLWAVHRQ-KFQFSLTGHMNWV 147

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             A +SPD   IV  SD    + + +      +      +         + P G  IA  
Sbjct: 148 RCARFSPDGRLIVSASD---DKSIKLWDRTSKECTHTFYEYGGFVNHVEFHPNGTCIA-A 203

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             S     +  ++ +   +   V    + + ++ PSG  L+ + 
Sbjct: 204 GGSDNTVKVWDIRMNKLLQHYQVHGGAVNSLSFHPSGNYLVSAS 247



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 62/166 (37%), Gaps = 9/166 (5%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             R  +    F+ N K+ + S   D ++ ++       A   + +   I  S S+SP   
Sbjct: 16  GHRDAVTCLDFNPNMKQLV-SGSMDSSLMVFHFKPHMRAYRFVGHKDAI-TSVSFSPSGH 73

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            I   S R+   +L+V    G     + +   A+     +S  G  +  T    +   + 
Sbjct: 74  LIASGS-RDKTVRLWVPSVKGEST--VFKAHMATVRSVDFSRDGQSLL-TSSDDKSLKLW 129

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            + +   Q  L    + ++   +SP GR ++ +     D   KL+ 
Sbjct: 130 AVHRQKFQFSLTGHMNWVRCARFSPDGRLIVSASD---DKSIKLWD 172


>gi|260171456|ref|ZP_05757868.1| hypothetical protein BacD2_06280 [Bacteroides sp. D2]
          Length = 831

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---DEAMDIY 285
             Y     L    M+         + +   ++  P    +G+  L S +K   ++   +Y
Sbjct: 174 CNYIAGGALAKLKMNGIWAEVETMLTDEEGVVRDPNLHFDGQHLLFSWKKSPKEDDFHLY 233

Query: 286 SVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGK---------EQLYVMQSNG 335
            +DL++   ++LT      +I   Y PD   I+F S R G            +Y+    G
Sbjct: 234 EMDLKTREIKQLTFGKGHADIEGIYLPD-DNILFNSTRCGSTVDCWFTEVSNMYLCDREG 292

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQ 382
              +++  D+  +   P     G  + +T++            +  M  DG+ 
Sbjct: 293 RYMRQVGFDQVHTVT-PTLLDDGR-VVYTRWDYNDRGQVWAQPLFQMNPDGTG 343


>gi|262194672|ref|YP_003265881.1| WD40 repeat, subgroup [Haliangium ochraceum DSM 14365]
 gi|262078019|gb|ACY13988.1| WD40 repeat, subgroup [Haliangium ochraceum DSM 14365]
          Length = 304

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 4/114 (3%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T       SA +SPD  ++V  S       + V  ++GS Q  + +  E       + P 
Sbjct: 132 TEHDAAVRSARFSPDGRRVVSASY---DNTIRVWNADGSGQPLVLRGHEDWVSWAEFDPA 188

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           G+ IA +    +   I      G    L   +  + +  +SP GR ++ +   +
Sbjct: 189 GERIA-SASKDKSIRIWRADGTGEPVVLRDHEQWINSARFSPDGRRVVSASDDN 241



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 45/116 (38%), Gaps = 5/116 (4%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
               + + + RFS +G+R ++S   D  + +++ D  S     L         A + P  
Sbjct: 132 TEHDAAVRSARFSPDGRR-VVSASYDNTIRVWNAD-GSGQPLVLRGHEDWVSWAEFDPAG 189

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +I   S     + + + +++G+ +  + +D E       +SP G  +        
Sbjct: 190 ERIASASK---DKSIRIWRADGTGEPVVLRDHEQWINSARFSPDGRRVVSASDDNT 242



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 44/104 (42%), Gaps = 5/104 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             VVS    N++ V + DG+    +    +  +    F P  +++A A+ D      + +
Sbjct: 148 RRVVSASYDNTIRVWNADGSGQPLVLRGHEDWVSWAEFDPAGERIASASKDK----SIRI 203

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                   P  + +    I + RFS +G+R ++S   D  + ++
Sbjct: 204 WRADGTGEPVVLRDHEQWINSARFSPDGRR-VVSASDDNTVRVW 246



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 10/110 (9%)

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            + I  + +A+     +SP G  +    +      I V   DGS  + LV   +    +W
Sbjct: 127 AQVIFTEHDAAVRSARFSPDGRRVVSASYDNT---IRVWNADGSG-QPLVLRGHEDWVSW 182

Query: 398 S---PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +   P+G  +  + K   D   +++  D  G    L +   + +  ++  
Sbjct: 183 AEFDPAGERIASASK---DKSIRIWRADGTGEPVVLRDHEQWINSARFSP 229


>gi|217969068|ref|YP_002354302.1| hypothetical protein Tmz1t_0633 [Thauera sp. MZ1T]
 gi|217506395|gb|ACK53406.1| WD-40 repeat protein [Thauera sp. MZ1T]
          Length = 1183

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 51/369 (13%), Positives = 100/369 (27%), Gaps = 58/369 (15%)

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
            +   P        W       +  GR + +G+  + V                      
Sbjct: 576 GRPAEPVVTFAHDAW-------VRRGRFLPDGERVITV--------SGGLAYLWSLAQPT 620

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           A  R   H    +IY +        + R L  +           +  +D D         
Sbjct: 621 APLRSFEHG--GNIYSAFDT---SADGRRLATAGDGAQKARVIRIWDVDADAPQPLLTLD 675

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSS 267
           +    +    FSP+   VA A  +     R  +    ++R  + +         A  F+ 
Sbjct: 676 AEGAWIMGLAFSPDGCCVATAAVERGKAERSAIALWGLERRREILSLPLEEPSDAIAFAP 735

Query: 268 NGKRALISVQKDEAMDIYSVDLQS---------NATER----------LTNTLFINISAS 308
           +G  AL++  +D  + ++    +            T R          L        +  
Sbjct: 736 DG-SALVTASRDGWLRVWEPAGKGFDVLLREAAGGTHRGEVLAWNGRTLAGHGDRIRNVE 794

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S D + I       G     V   +  +         +      +SP G  +A     G
Sbjct: 795 VSADGALIA---SAGGDGTARVWSRHTGENLLTLTGHLSYVEAARFSPDGRHVATASRDG 851

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               +     +G    +        +  +SP GR+L        D  ++++    +G   
Sbjct: 852 T---VKFWNIEGHANTVT-------SIAFSPDGRTLA---TGSSDRTARIWDF-ADGTPR 897

Query: 429 TLINTPAYA 437
                  +A
Sbjct: 898 LRHTLRGHA 906



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 51/365 (13%), Positives = 100/365 (27%), Gaps = 61/365 (16%)

Query: 73   LQRSDVFNLISQDSF---KQKITNPDSIPRFQDWNSLG-AQVLVTGRVIKEG----KDRL 124
            L  +   + +    F    + +         + WN  G A  + +     +G        
Sbjct: 823  LTLTGHLSYVEAARFSPDGRHVATASRDGTVKFWNIEGHANTVTSIAFSPDGRTLATGSS 882

Query: 125  RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
                R+WD           F       R      +D +++      G            +
Sbjct: 883  DRTARIWD-----------FADGTPRLRHTLRGHADQVHRVAFDPSGA----------RL 921

Query: 185  VSGIIKNSLCVMDRDGANIRYLT-----PSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
             +  + N L + D        L            L    FSP+ + +A  +   +   R+
Sbjct: 922  ATAGLDNQLRLWDVASGEAVTLPSVPPEHRHKDQLRGVAFSPDGRLLA--SAGADGHARL 979

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            Y +           G     +    F   G+R   S   D  + ++  DL        T 
Sbjct: 980  YPLAGEGSPVSVLHGGATIQVSGVAFHPGGERWATSGF-DGKLKLW--DLSGTDLG--TV 1034

Query: 300  TLFIN--------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-------D 344
             L  +           ++SPD   +     R    ++ V       +  +         +
Sbjct: 1035 GLPDDERKLGIRIAGLAFSPDGEYVAAVVQR----RVRVWPVAAFKEPEVHPPVRLPLIE 1090

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                     +SP G  +A    S     +  M      + + V  + ++   +SP G  L
Sbjct: 1091 GARHCAALAYSPDGRWLA-VGCSDAGVRLFEMPAGTLVKTITVHKNEVRGVAFSPDGTLL 1149

Query: 405  IFSRK 409
              +  
Sbjct: 1150 ATASN 1154



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 63/194 (32%), Gaps = 22/194 (11%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLT-NTLFINISASYSPDSSQIVFES 320
            FS +G R L + Q D+   ++  D++S       +T           + PD  +++  S
Sbjct: 551 AFSPDGGRLLTAGQ-DQTARVW--DIRSGRPAEPVVTFAHDAWVRRGRFLPDGERVITVS 607

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---KFSGEKFAIGVMK 377
              G   L+ +    +  +         Y     S  G  +A             I  + 
Sbjct: 608 --GGLAYLWSLAQPTAPLRSFEHGGN-IYSAFDTSADGRRLATAGDGAQKARVIRIWDVD 664

Query: 378 KDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP- 434
            D  Q  L    E + +    +SP G  +  +  + G       ++    R   +++ P 
Sbjct: 665 ADAPQPLLTLDAEGAWIMGLAFSPDGCCVATAAVERGKAERSAIALWGLERRREILSLPL 724

Query: 435 -------AYASDPQ 441
                  A+A D  
Sbjct: 725 EEPSDAIAFAPDGS 738



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 83/252 (32%), Gaps = 25/252 (9%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            + RLWDV   + +      S P       H   D +        G           +   
Sbjct: 929  QLRLWDVASGEAV---TLPSVPPE-----HRHKDQLRGVAFSPDGR--------LLASAG 972

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTR 245
                  L  +  +G+ +  L       +    F P  ++ A + +D +  +  +   D  
Sbjct: 973  ADGHARLYPLAGEGSPVSVLHGGATIQVSGVAFHPGGERWATSGFDGKLKLWDLSGTDLG 1032

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFI 303
                P         I    FS +G+     VQ+   +   +   + + +   RL      
Sbjct: 1033 TVGLPDDERKLGIRIAGLAFSPDGEYVAAVVQRRVRVWPVAAFKEPEVHPPVRLPLIEGA 1092

Query: 304  N--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                + +YSPD   +      +   +L+ M + G+  K I+  K        +SP G L+
Sbjct: 1093 RHCAALAYSPDGRWLA-VGCSDAGVRLFEMPA-GTLVKTITVHKN-EVRGVAFSPDGTLL 1149

Query: 362  AFTKFSGEKFAI 373
            A T  + + F +
Sbjct: 1150 A-TASNDKTFHV 1160


>gi|15598815|ref|NP_252309.1| hypothetical protein PA3619 [Pseudomonas aeruginosa PAO1]
 gi|9949777|gb|AAG07007.1|AE004782_5 hypothetical protein PA3619 [Pseudomonas aeruginosa PAO1]
          Length = 335

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 269 GKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESD 321
           G R +        D + ++Y  D +S +T +L N    NI     A +SPD   + F   
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQL-NQPGWNIEDPMNAHFSPDGRYLTFMGR 103

Query: 322 REGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           + G   ++     G+     ++        DP +S  G  +        + A  V   DG
Sbjct: 104 QNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQVVLKHEGDIRLATLVFNGDG 163

Query: 381 SQE----RLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           S      + +  D        P  +PSG+ ++++         ++   +L       + T
Sbjct: 164 SVGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYAT--GAGDSLRVVRRNLENGQVCALAT 221

Query: 434 PA 435
           PA
Sbjct: 222 PA 223



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 58/172 (33%), Gaps = 11/172 (6%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQK 278
             ++ Y +Y +       L          R  N     +       FS +G+      ++
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIEDPMNAHFSPDGRYLTFMGRQ 104

Query: 279 DEAMDIYSVDLQSNA-TERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNG- 335
           + A  +++  +        LT      N    +S D  Q+V + + + +    V   +G 
Sbjct: 105 NGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQVVLKHEGDIRLATLVFNGDGS 164

Query: 336 ---SDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              S  K ++ D  ++    P  +P G  + +   +G+   +     +  Q 
Sbjct: 165 VGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYATGAGDSLRVVRRNLENGQV 216



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/278 (12%), Positives = 75/278 (26%), Gaps = 15/278 (5%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH                     L     +  G   ++L + D    + R L      I 
Sbjct: 25  AHAACTANLALQPASSLPALGGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIE 84

Query: 215 --FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKR 271
                 FSP+ + + +          V+       +AP  +          P+FS +G++
Sbjct: 85  DPMNAHFSPDGRYLTFMG-RQNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQ 143

Query: 272 ALISVQKDEAMDIYSVDLQSN---ATERLTNTLFINIS---ASYSPDSSQIVFESDREGK 325
            ++  + D  +     +   +   +  +       +        +P    +V+ +     
Sbjct: 144 VVLKHEGDIRLATLVFNGDGSVGVSAWKAVTGDGWSTEESMPFLTPSGKYVVYATGAGDS 203

Query: 326 EQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---KKDGS 381
            ++            + +       + PV                   + ++      G+
Sbjct: 204 LRVVRRNLENGQVCALATPAAGGRDYYPVVRDYTAYFLSRTQPAGNDQLAMVVPNSPPGT 263

Query: 382 QERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKL 418
              L +          +P +   LIFS      T S L
Sbjct: 264 PAILPLNHCQGDNSDAAPVNEDYLIFSSTSFDPTYSLL 301



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 8/94 (8%)

Query: 358 GDLIAFTKF---SGEKFAIGVMKKDGSQERLLVEDS-NLQAPT---WSPSGRSLIFSRKK 410
           G  + +  +         + +        R L +   N++ P    +SP GR L F  ++
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIEDPMNAHFSPDGRYLTFMGRQ 104

Query: 411 DGDTGSKLYSIDLNGRNETLINT-PAYASDPQWV 443
           +G      ++I        L         DP++ 
Sbjct: 105 NGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFS 138


>gi|86134288|ref|ZP_01052870.1| dipeptidyl aminopeptidase IV [Polaribacter sp. MED152]
 gi|85821151|gb|EAQ42298.1| dipeptidyl aminopeptidase IV [Polaribacter sp. MED152]
          Length = 740

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 57/311 (18%), Positives = 116/311 (37%), Gaps = 43/311 (13%)

Query: 123 RLRVEFRLWDVKDRKQ-IIGKKFFSS--PASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                F  +DV  +K  +IGK           +K+A+   ++IY      K    + ++ 
Sbjct: 125 SYSGTFYAYDVASKKLSLIGKDIQEPLFSPDNKKVAYAKDNNIY-----IKDFSRNALIQ 179

Query: 180 VSESVVSGIIKNSLCVMDRD---GA--------NIRYLTPSRDQILFEPRFS-------- 220
           V++      + N +     +   G         N RYL   R      P FS        
Sbjct: 180 VTKDGKKNSVINGITDWVYEEEFGFVRAFEWSKNSRYLAFLRFDESDVPTFSMDIVGDGL 239

Query: 221 -PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALISVQ 277
            PNQQ   Y    +++      M T  ++  K+I +       PR  +S N    L++  
Sbjct: 240 YPNQQVFKYPKAGEKNADVTLHMYTLANKTTKKI-SLGDYEYIPRIKWS-NNDAILVATT 297

Query: 278 KDE---AMDIYSVDLQSNATERL---TNTLFIN--ISASYSPDSSQIVFESDREGKEQLY 329
            +     + ++ V+   +++  L   T+  +I+   + ++  D+S  ++ S+R+G   +Y
Sbjct: 298 LNRYQNNLKLHKVNALRSSSTVLLNETDKAYIDITDNLTFLTDNS-FIWTSERDGFNHIY 356

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLV 387
               NG+   +I++          ++P    I +           +  +  DG  ++LL 
Sbjct: 357 HYDFNGNLINQITKGDWEVTNYYGFNPTKKTIYYQSVENGSINRGVYSIGLDGKNKQLLS 416

Query: 388 EDSNLQAPTWS 398
                 +  +S
Sbjct: 417 NKDGQNSAAFS 427


>gi|170767010|ref|ZP_02901463.1| conserved hypothetical protein [Escherichia albertii TW07627]
 gi|170124448|gb|EDS93379.1| conserved hypothetical protein [Escherichia albertii TW07627]
          Length = 404

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT T +      +NI   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTESALPAPPRGVVQRRLTFTHYRAFPGLVNIPRHWVRCNPQGTQIAFLMRDDNGVVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLNN----RIACAHVQSGKIEYLTE 369

Query: 389 D----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +          +L+  + +
Sbjct: 370 GHANPPSADAVVFSPDGKWLAWME------AGQLWITETD 403



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 48/137 (35%), Gaps = 12/137 (8%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G+++  L          R      +      R +P   ++A+   DD  +++++L+  
Sbjct: 264 PRGVVQRRLTFTHY-----RAFPGLVNIPRHWVRCNPQGTQIAFLMRDDNGVVQLWLISP 318

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +     +   N   +  A  +  +G+     +       I    +QS   E LT      
Sbjct: 319 QGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL----NNRIACAHVQSGKIEYLTEGHANP 374

Query: 305 ISA---SYSPDSSQIVF 318
            SA    +SPD   + +
Sbjct: 375 PSADAVVFSPDGKWLAW 391


>gi|186684120|ref|YP_001867316.1| hypothetical protein Npun_F3993 [Nostoc punctiforme PCC 73102]
 gi|186466572|gb|ACC82373.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 335

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 63/171 (36%), Gaps = 12/171 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D             D +++    SP+ Q +A  + D + +++V+       +    
Sbjct: 158 IRLWDLLQQRPLGTLVRFDNLIYTLAISPDGQTLA--SGDSKGVIKVW--SLSTGKLISE 213

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSP 311
                +++ A  F+ +G+  + S  +D  + ++  ++ +    R LT       + + +P
Sbjct: 214 FVAHSNVVSAVIFTPDGQTLV-SASRDRTVKLW--NINTGELVRTLTGHNNWVNAIAINP 270

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           D   +       GK+ + V      +                +SP G ++A
Sbjct: 271 DGQTLA----SAGKDGIKVWNLTTGELINTLNGHTDWVSAIAFSPNGKILA 317



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 86/239 (35%), Gaps = 23/239 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----FRSMI 260
           Y     +  +    FSP+ + +A    ++E I+R++          K++ +     ++ +
Sbjct: 42  YTLRGHNGTVKSLAFSPDSRILASGGAENEGIIRLWNPANG-----KKLADINKAHKAAV 96

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +   S +G+    S   D  ++++++      +          +S + SPDS  ++   
Sbjct: 97  ESLVISPDGQTLA-SCSDDNTINLWNL-KNFKFSRSFVGHTSNVLSLAVSPDSKVLI--- 151

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                + + +               +   +    SP G  +A       K  I V     
Sbjct: 152 -SGALDGIRLWDLLQQRPLGTLVRFDNLIYTLAISPDGQTLA---SGDSKGVIKVWSLST 207

Query: 381 SQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            +     +   + + A  ++P G++L+ + +   D   KL++I+      TL     + 
Sbjct: 208 GKLISEFVAHSNVVSAVIFTPDGQTLVSASR---DRTVKLWNINTGELVRTLTGHNNWV 263



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 62/191 (32%), Gaps = 32/191 (16%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWD+  ++ +                    + IY       G          +++ SG
Sbjct: 158 IRLWDLLQQRPLGTLV-------------RFDNLIYTLAISPDG----------QTLASG 194

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  + V       +     +   ++    F+P+ Q +  A+ D      V L +    
Sbjct: 195 DSKGVIKVWSLSTGKLISEFVAHSNVVSAVIFTPDGQTLVSASRDR----TVKLWNINTG 250

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              + +    + + A   + +G+    S  KD    I   +L +       N     +SA
Sbjct: 251 ELVRTLTGHNNWVNAIAINPDGQTLA-SAGKDG---IKVWNLTTGELINTLNGHTDWVSA 306

Query: 308 -SYSPDSSQIV 317
            ++SP+   + 
Sbjct: 307 IAFSPNGKILA 317


>gi|218551219|ref|YP_002385011.1| hypothetical protein EFER_3984 [Escherichia fergusonii ATCC 35469]
 gi|218358761|emb|CAQ91418.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
          Length = 404

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLTNT------LFINISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT T        +N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHQRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP GR L +        G +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGRWLAWME------GGQLWITETD 403



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGRWLAW---MEGG-QLWITETD 403



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 305 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 363 EVEYLTENHANPPSAD-AVVFSPDGRWLAW 391


>gi|108758869|ref|YP_631974.1| WD domain-/G-beta repeat-containing protein [Myxococcus xanthus DK
           1622]
 gi|108462749|gb|ABF87934.1| WD domain G-beta repeat protein [Myxococcus xanthus DK 1622]
          Length = 799

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 67/196 (34%), Gaps = 11/196 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+ + +A           + + +  + +  + I    + I +  +    +   + + 
Sbjct: 205 SWGPDGRLLA-VLDQRGTRGGLRIWNAGLGQVARIIHQDSTDIRSVSWGPRDEDLAVGLA 263

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNG 335
                 +  +D  + A  +  +      +  ++    +++   S  E G  ++    ++ 
Sbjct: 264 DG---RLALIDPATGALHQTWSAHAGPVVGLAWYARGNELASVSHPETGGAEVRFWAASS 320

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
             + R       +     WSP G  +A  + +GE+  I  +         + E  +  + 
Sbjct: 321 GTESRAPLRTARTLRKIHWSPDGARVAL-EMAGEQVEIHNLDP----WVQVHEVGHGDSF 375

Query: 396 TWSPSGRSLIFSRKKD 411
           +WSP G        ++
Sbjct: 376 SWSPDGARYAVGSYRN 391



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 81/262 (30%), Gaps = 26/262 (9%)

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI 162
           W   GA          +G        RL  V D++             W      ++  I
Sbjct: 193 WRQTGASYPSDASWGPDG--------RLLAVLDQR-----GTRGGLRIWNAGLGQVARII 239

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +Q  T  +           E +  G+    L ++D     +     +    +    +   
Sbjct: 240 HQDSTDIRSVSWGP---RDEDLAVGLADGRLALIDPATGALHQTWSAHAGPVVGLAWYAR 296

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             ++A  ++ +     V           +        +    +S +G R  + +   E +
Sbjct: 297 GNELASVSHPETGGAEVRFWAASSGTESRAPLRTARTLRKIHWSPDGARVALEM-AGEQV 355

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +I+++D       ++ + +    S S+SPD ++    S R     + V ++   + +   
Sbjct: 356 EIHNLD----PWVQV-HEVGHGDSFSWSPDGARYAVGSYR----NVRVYETATHELQASW 406

Query: 343 QDKEASYFDPVWSPQGDLIAFT 364
               +      WSP  D +   
Sbjct: 407 FGPWSVSSRMDWSPTQDWLVIV 428



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/149 (12%), Positives = 36/149 (24%), Gaps = 6/149 (4%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   AS+ PD   +     R  +  L +  +      RI            W P+ 
Sbjct: 196 TGASYPSDASWGPDGRLLAVLDQRGTRGGLRIWNAGLGQVARIIHQDSTDIRSVSWGPRD 255

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRK-KDGDTG 415
           + +A     G    + ++                 +    W   G  L      + G   
Sbjct: 256 EDLAVGLADG---RLALIDPATGALHQTWSAHAGPVVGLAWYARGNELASVSHPETGGAE 312

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVG 444
            + ++      +   + T        W  
Sbjct: 313 VRFWAASSGTESRAPLRTARTLRKIHWSP 341



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 56/157 (35%), Gaps = 16/157 (10%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P  D  +    ++P+ Q +             + +  R     KR+ +   ++     S 
Sbjct: 641 PETDSPVVALGWTPDSQSLIIVYTHA-----AWDVWNRSSGVLKRVESAPEILTTAALSP 695

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G R   S    + + +  +D+ + A    T      +S ++ PD ++        G  Q
Sbjct: 696 DGTRLACS----DRLGVSVLDVGTGAVVAETPMWMRQLSLAWHPDGTRF----SGGGAYQ 747

Query: 328 L---YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           L   + +  +G     +    +++     W   G+++
Sbjct: 748 LVFDWQVHEHGQLLPSVMGVHDSTVLGASWRGDGEVL 784



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 69/224 (30%), Gaps = 35/224 (15%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R+   +    +   ++SP   ++A       D  +V L            G+    + A
Sbjct: 496 QRHELVAHSSAINATKWSPAGDRLA----SAGDDGKVRLWGAAGQALATLDGHEGKSVRA 551

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------FINISA-----SYSP 311
             + ++G R   S   D  + ++  D  +    RLT             +      + SP
Sbjct: 552 LGWDASGARLA-SGGADGRVCVW--DAGTG---RLTQPPLQMMQRAQGHTPKVEHVALSP 605

Query: 312 DSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL--IAFTK 365
           D   +               + V       +     + ++      W+P      I +T 
Sbjct: 606 DGRTLASAGATLFLTGSMTSVQVWDVASRTELLNIPETDSPVVALGWTPDSQSLIIVYTH 665

Query: 366 FSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            + + +    GV+K+  S   +L   +       SP G  L  S
Sbjct: 666 AAWDVWNRSSGVLKRVESAPEILTTAAL------SPDGTRLACS 703


>gi|331670533|ref|ZP_08371372.1| conserved hypothetical protein [Escherichia coli TA271]
 gi|331062595|gb|EGI34515.1| conserved hypothetical protein [Escherichia coli TA271]
          Length = 416

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 403


>gi|323939127|gb|EGB35341.1| hypothetical protein ERDG_04224 [Escherichia coli E482]
          Length = 404

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 403



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 305 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 363 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 391


>gi|312972020|ref|ZP_07786194.1| uncharacterized protein yidR [Escherichia coli 1827-70]
 gi|310334397|gb|EFQ00602.1| uncharacterized protein yidR [Escherichia coli 1827-70]
          Length = 404

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 403



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 305 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 363 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 391


>gi|157158706|ref|YP_001465173.1| hypothetical protein EcE24377A_4198 [Escherichia coli E24377A]
 gi|193063864|ref|ZP_03044951.1| conserved hypothetical protein [Escherichia coli E22]
 gi|193069132|ref|ZP_03050089.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|194435921|ref|ZP_03068024.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|218556254|ref|YP_002389168.1| hypothetical protein ECIAI1_3867 [Escherichia coli IAI1]
 gi|218697411|ref|YP_002405078.1| hypothetical protein EC55989_4158 [Escherichia coli 55989]
 gi|253771449|ref|YP_003034280.1| hypothetical protein ECBD_0014 [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163640|ref|YP_003046748.1| hypothetical protein ECB_03572 [Escherichia coli B str. REL606]
 gi|260846526|ref|YP_003224304.1| hypothetical protein ECO103_4469 [Escherichia coli O103:H2 str.
           12009]
 gi|157080736|gb|ABV20444.1| conserved hypothetical protein [Escherichia coli E24377A]
 gi|192930579|gb|EDV83186.1| conserved hypothetical protein [Escherichia coli E22]
 gi|192957456|gb|EDV87902.1| conserved hypothetical protein [Escherichia coli E110019]
 gi|194425464|gb|EDX41448.1| conserved hypothetical protein [Escherichia coli 101-1]
 gi|218354143|emb|CAV00737.1| conserved hypothetical protein [Escherichia coli 55989]
 gi|218363023|emb|CAR00662.1| conserved hypothetical protein [Escherichia coli IAI1]
 gi|242379228|emb|CAQ34033.1| conserved protein [Escherichia coli BL21(DE3)]
 gi|253322493|gb|ACT27095.1| conserved hypothetical protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975541|gb|ACT41212.1| hypothetical protein ECB_03572 [Escherichia coli B str. REL606]
 gi|253979697|gb|ACT45367.1| hypothetical protein ECD_03572 [Escherichia coli BL21(DE3)]
 gi|257761673|dbj|BAI33170.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
 gi|323160968|gb|EFZ46888.1| hypothetical protein ECE128010_2802 [Escherichia coli E128010]
 gi|323959754|gb|EGB55404.1| hypothetical protein ERGG_03705 [Escherichia coli H489]
 gi|323971165|gb|EGB66411.1| hypothetical protein ERHG_02782 [Escherichia coli TA007]
          Length = 404

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 403



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 305 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 363 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 391


>gi|293464012|ref|ZP_06664426.1| yidR protein [Escherichia coli B088]
 gi|300815065|ref|ZP_07095290.1| conserved hypothetical protein [Escherichia coli MS 107-1]
 gi|300932319|ref|ZP_07147588.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|291321644|gb|EFE61080.1| yidR protein [Escherichia coli B088]
 gi|300459932|gb|EFK23425.1| conserved hypothetical protein [Escherichia coli MS 187-1]
 gi|300531957|gb|EFK53019.1| conserved hypothetical protein [Escherichia coli MS 107-1]
          Length = 416

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 403


>gi|191165814|ref|ZP_03027652.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|209921166|ref|YP_002295250.1| hypothetical protein ECSE_3975 [Escherichia coli SE11]
 gi|300903036|ref|ZP_07120978.1| hypothetical protein HMPREF9536_01178 [Escherichia coli MS 84-1]
 gi|301306275|ref|ZP_07212347.1| hypothetical protein HMPREF9347_04891 [Escherichia coli MS 124-1]
 gi|190904138|gb|EDV63849.1| conserved hypothetical protein [Escherichia coli B7A]
 gi|209914425|dbj|BAG79499.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|300404942|gb|EFJ88480.1| hypothetical protein HMPREF9536_01178 [Escherichia coli MS 84-1]
 gi|300838457|gb|EFK66217.1| hypothetical protein HMPREF9347_04891 [Escherichia coli MS 124-1]
 gi|315254625|gb|EFU34593.1| putative ATP/GTP-binding protein [Escherichia coli MS 85-1]
 gi|323944161|gb|EGB40241.1| hypothetical protein EREG_04252 [Escherichia coli H120]
 gi|324018407|gb|EGB87626.1| hypothetical protein HMPREF9542_02918 [Escherichia coli MS 117-3]
 gi|324115959|gb|EGC09885.1| hypothetical protein ERBG_04046 [Escherichia coli E1167]
          Length = 416

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 403


>gi|256021293|ref|ZP_05435158.1| hypothetical protein ShiD9_20400 [Shigella sp. D9]
 gi|307313242|ref|ZP_07592867.1| conserved hypothetical protein [Escherichia coli W]
 gi|306906925|gb|EFN37434.1| conserved hypothetical protein [Escherichia coli W]
 gi|315062995|gb|ADT77322.1| hypothetical protein ECW_m3988 [Escherichia coli W]
 gi|323376411|gb|ADX48679.1| hypothetical protein EKO11_0014 [Escherichia coli KO11]
          Length = 404

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 403



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 305 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 363 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 391


>gi|260789125|ref|XP_002589598.1| hypothetical protein BRAFLDRAFT_281422 [Branchiostoma floridae]
 gi|20302740|gb|AAM18868.1|AF391288_4 unknown [Branchiostoma floridae]
 gi|229274778|gb|EEN45609.1| hypothetical protein BRAFLDRAFT_281422 [Branchiostoma floridae]
          Length = 353

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 82/224 (36%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 54  YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 109

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+    L+S   D+ + I+ ++      + L          +++P S+ IV  S
Sbjct: 110 SDVAWSSD-SHLLVSASDDKTLKIWDLN-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 167

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 168 F---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 222

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 223 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 263


>gi|300822464|ref|ZP_07102604.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|331679787|ref|ZP_08380457.1| conserved hypothetical protein [Escherichia coli H591]
 gi|300525111|gb|EFK46180.1| conserved hypothetical protein [Escherichia coli MS 119-7]
 gi|331072959|gb|EGI44284.1| conserved hypothetical protein [Escherichia coli H591]
          Length = 416

 Score = 62.3 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 403


>gi|327313496|ref|YP_004328933.1| peptidase, S9A/B/C family, catalytic domain-containing protein
           [Prevotella denticola F0289]
 gi|326945892|gb|AEA21777.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           denticola F0289]
          Length = 744

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 56/404 (13%), Positives = 114/404 (28%), Gaps = 107/404 (26%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              L D    ++   K+ FS     R      SD++ + +   +  +  R + + ++   
Sbjct: 66  SCSLVDPVSGRE---KRLFSLDELNRWAGLEKSDEVVRHLYAAEFPYADRPVVLVQNGRE 122

Query: 187 G----------------------------------IIKNSLCVMDRDGANIRYLTPSRDQ 212
                                              +  N L V D  G   +  T     
Sbjct: 123 DLYVNFKTHRLEQRSDRPAGLQAHLWNSQSGATAYVADNQLFVTDAKGQKRQLTTDGSRN 182

Query: 213 ILFEPR-------------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           I++                +SP   ++A+   D   +    L+D          G  R+ 
Sbjct: 183 IVYGQSVHRDEFGISGGLYWSPKGNRLAFYRMDQSMVADYPLVDIPELDWKPEKGESRAA 242

Query: 260 ILAP-----------------------------------------RFSSNGKRAL-ISVQ 277
             AP                                          +S + K      V 
Sbjct: 243 KAAPIKYPMAGETSHKVTVGVYDLTTGKTVYLQAGDPTDRYFTNIAWSPDEKTVYMFEVN 302

Query: 278 KDEAM-DIYSVDLQSN----ATERLTNTLFINISA----SYSP-DSSQIVFESDREGKEQ 327
           +D+    + S D  +        R T+  +  +       + P + ++ V +S ++G   
Sbjct: 303 RDQNDCRLVSYDAVTGAKLKELYRETDAKY--VEPCHPIQFLPWNENEFVLQSQKDGYNH 360

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERL 385
           LY+   +G   ++I+  K        ++ +   I +     +  +    ++     +  L
Sbjct: 361 LYLFNKDGRLIRQITSGKWVVMDILGFNAKQKGIIYVSNECNPIQRNAWLVNVATGKRTL 420

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           L        P  S  G  L+     + D   K   + LNGR + 
Sbjct: 421 LDNGRGCHYPKLSEDGSVLM-DSYSEPDVPHKYEVVTLNGRPQR 463


>gi|254410534|ref|ZP_05024313.1| hypothetical protein MC7420_3049 [Microcoleus chthonoplastes PCC
           7420]
 gi|196182740|gb|EDX77725.1| hypothetical protein MC7420_3049 [Microcoleus chthonoplastes PCC
           7420]
          Length = 1045

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 81/241 (33%), Gaps = 16/241 (6%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G  N R +  ++ + S     ++ + +  G            +      SPN Q +A
Sbjct: 753 HSGGVINVRFIPAAKHLGSAGEDGTIRIWNSAGQQQTQWQAHSGGVTSF-SISPNGQLIA 811

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
               D +  +R++ +  +I    +     +S +    FS NG+    +  +D    +++V
Sbjct: 812 TGGKDGK--VRIWNVIGQIKAEWQV---SQSSVTTLNFSPNGQFIA-TGGEDSIFQLWTV 865

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           + Q  A  R         S  +S D   I          ++ +        +     +  
Sbjct: 866 EGQHKAEAR--GNKSPLTSVVFSADGKLIAMA---GKDSKIRIWNLEDQKIEEFDSGQSG 920

Query: 348 SYFDPVWSPQ-GDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSL 404
              + V++P     I  T        I  + K     RL     +  + + ++SP G+ L
Sbjct: 921 -VNNIVFNPNPEQSILATAGEDGTVRIWDITKSSLPLRLKLFPHEGGVYSLSFSPDGQRL 979

Query: 405 I 405
            
Sbjct: 980 A 980



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 101/293 (34%), Gaps = 21/293 (7%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
              + +S  S +Q + +       + WNS G Q     +        + V F    +   
Sbjct: 714 GKVSSVSFSSDEQYLASAGEDGTIRIWNSAGQQ---QTQWQAHSGGVINVRF----IPAA 766

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           K +      +      +I ++      Q      G  +  I    + + +G     + + 
Sbjct: 767 KHLGS----AGEDGTIRIWNSAGQQQTQWQAHSGGVTSFSISPNGQLIATGGKDGKVRIW 822

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           +  G        S+  +     FSPN Q +A           ++ + T   +        
Sbjct: 823 NVIGQIKAEWQVSQSSVTTL-NFSPNGQFIA-----TGGEDSIFQLWTVEGQHKAEARGN 876

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ- 315
           +S + +  FS++GK   ++  KD  + I+  +L+    E   +      +  ++P+  Q 
Sbjct: 877 KSPLTSVVFSADGKLIAMAG-KDSKIRIW--NLEDQKIEEFDSGQSGVNNIVFNPNPEQS 933

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           I+  +  +G  +++ +  +    +      E   +   +SP G  +A     G
Sbjct: 934 ILATAGEDGTVRIWDITKSSLPLRLKLFPHEGGVYSLSFSPDGQRLATAGEDG 986


>gi|254384963|ref|ZP_05000298.1| protease [Streptomyces sp. Mg1]
 gi|194343843|gb|EDX24809.1| protease [Streptomyces sp. Mg1]
          Length = 1113

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 61/230 (26%), Gaps = 65/230 (28%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+   R+ I  PRFS +G     +  +    +I+   +      RL+     +     +S
Sbjct: 64  RLTVDRTRIGHPRFSPDGSHIAFTTWRSLDPEIHLAPVAGGPARRLSYWGATDTRVCGWS 123

Query: 311 P---DSSQ----------------IVFESDREGKEQ----------LYVMQSNGSDQKRI 341
           P   D                     +    +G             + V +  G +++ +
Sbjct: 124 PPDKDGRSDILAVSSHHQPFSYFAWAYSLPTDGSPGGKLPWGPVSDIAVREEPGGERRTL 183

Query: 342 SQDKEASYFDPVW---------------------------SP--QGDLIAFTKFSGEKFA 372
               +  +    W                           SP   G  IAF         
Sbjct: 184 LLTGKPPHEPASWKRYRGGATGRLWLHGRRLLEDIEGHLDSPMFVGGRIAFLSDHEGIGN 243

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +     DGS  R   +     A   S  G  +++           L+ +D
Sbjct: 244 VYSCLPDGSDLRRHTDHEEFYARHASSDGSRIVY------QCAGDLWLVD 287



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 70/214 (32%), Gaps = 15/214 (7%)

Query: 242 MDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSN--ATER 296
             T  D   + I +   + +  P    +G +       +    I    +   S      R
Sbjct: 342 WLTHRDGPARTIADTPGVRVRLPEMLGSGGQVAYVTDAEGEDAIEIAYLPRASGDREPRR 401

Query: 297 LTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           L +            P+  ++   S+      +   + +  +   + Q       D  +S
Sbjct: 402 LASGELGRVTELLADPEGERLAIASNDGRLLLIDATEESDGEVTELIQSINGPVTDLAFS 461

Query: 356 PQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRK 409
           P G  + ++     +    I + K  G   R++V+      + + P ++  GR L F   
Sbjct: 462 PDGSWLTWSHPGIGRSLRQIKMAKISGPGARVIVDVTNGRFDDENPVFTRDGRYLAFLSW 521

Query: 410 KDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
           +  D    +++ DL+   G    L+   +    P
Sbjct: 522 RGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSP 555



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 46/148 (31%), Gaps = 10/148 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P  +++A A+ D   +L +   +       + I +    +    FS +G     S     
Sbjct: 417 PEGERLAIASND-GRLLLIDATEESDGEVTELIQSINGPVTDLAFSPDGSWLTWSHPGIG 475

Query: 281 A--MDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYV----M 331
                I    +       +   TN  F + +  ++ D   + F S R       V    +
Sbjct: 476 RSLRQIKMAKISGPGARVIVDVTNGRFDDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDL 535

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 +  +     A+     ++P G 
Sbjct: 536 SFPLGCRPYLVPLSSATPSPFAFTPDGR 563



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 9/129 (6%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--- 253
           + DG  +  L  S +  + +  FSP+   + ++       LR   M        + I   
Sbjct: 439 ESDGE-VTELIQSINGPVTDLAFSPDGSWLTWSHPGIGRSLRQIKMAKISGPGARVIVDV 497

Query: 254 GNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQ---SNATERLTNTLFINISAS 308
            N R     P F+ +G+       +  D   D+++ DL          +  +       +
Sbjct: 498 TNGRFDDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSPFA 557

Query: 309 YSPDSSQIV 317
           ++PD     
Sbjct: 558 FTPDGRPAA 566


>gi|194913287|ref|XP_001982666.1| GG12938 [Drosophila erecta]
 gi|190648342|gb|EDV45635.1| GG12938 [Drosophila erecta]
          Length = 361

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 83/224 (37%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 62  YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 117

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + ++ +     + + L          +++P S+ IV  S
Sbjct: 118 SDVAWSSD-SRLLVSGSDDKTLKVWELS-TGKSLKTLKGHSNYVFCCNFNPQSNLIVSGS 175

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 176 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 230

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 231 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 271


>gi|171915050|ref|ZP_02930520.1| WD-40 repeat [Verrucomicrobium spinosum DSM 4136]
          Length = 1875

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 62/377 (16%), Positives = 115/377 (30%), Gaps = 74/377 (19%)

Query: 113  TGRVIKEGKDRLRV-----EFRLWDVKDRKQI-IGKKFFSSPASWRKIAHT-ISDDIYQS 165
              +V         +       R+WDV  +K          + +  R+  +T    D    
Sbjct: 1004 VTQVSFSADGGFILSASTDRARVWDVFTQKPASTAVDLSDTTSFVREGTNTGFRPDGLAY 1063

Query: 166  ITGEKGD----FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE----- 216
            +T   G     +++       S +       L V   DG+ +      RD +L       
Sbjct: 1064 VTTVSGYKAVLWDTLSGTPLGSPLYHQDSVYLAVFSPDGSRL-LTYSERDGLLLWDSNTS 1122

Query: 217  -PR-------------FSPNQQK-------VAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
             P              FSP+ +        + Y       I++ +   +R    P  +  
Sbjct: 1123 APSGEYLAGRGSDHVQFSPDGRHLLAICNDIHYGIATSPGIVQRWDYASRTLLEP--LIT 1180

Query: 256  FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                ILA  FS +G R LI    +     ++  L         +       A +SPD ++
Sbjct: 1181 HHGRILAGEFSPDGGRFLIVCDDNHVRTYHT--LSGEPASPPISLPHPVSCAHFSPDGAR 1238

Query: 316  I------------------VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            I                  V  +   G+ QL+   +        S   +       +SP 
Sbjct: 1239 ILTGCGVPMPLIENDAKTSVTWNHTTGEAQLW--DATSGTPVLASFPHQGRVSTAAFSPD 1296

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSR---KKDG 412
            G  I  T        +        Q    +++ ++ +   ++S  GR L+      ++DG
Sbjct: 1297 GKRIV-TACEDRTARLW--DASSGQPLGAVMLHEAPVNHASFSADGRMLLTGSGIPRRDG 1353

Query: 413  DT---GSKLYSIDLNGR 426
                  ++L+     GR
Sbjct: 1354 GRFAGSARLWDA-ATGR 1369



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 45/331 (13%), Positives = 85/331 (25%), Gaps = 58/331 (17%)

Query: 124  LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH------------TISDDIYQSITGEKG 171
                 RLWD +    I       +       A              + D   Q       
Sbjct: 980  YDNTLRLWDGQSGDPIGNPMLHDNVTQVSFSADGGFILSASTDRARVWDVFTQKPASTAV 1039

Query: 172  DFNSRILFVSESVVSGIIKNSL-CVMDRDGANIRYLTPSRDQILFEP----------RFS 220
            D +    FV E   +G   + L  V    G             L  P           FS
Sbjct: 1040 DLSDTTSFVREGTNTGFRPDGLAYVTTVSGYKAVLWDTLSGTPLGSPLYHQDSVYLAVFS 1099

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----- 275
            P+  ++   TY + D L ++  +T         G     +   +FS +G+  L       
Sbjct: 1100 PDGSRLL--TYSERDGLLLWDSNTSAPSGEYLAGRGSDHV---QFSPDGRHLLAICNDIH 1154

Query: 276  ---VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                     +  +    ++     +T+   I ++  +SPD  + +   D      +    
Sbjct: 1155 YGIATSPGIVQRWDYASRTLLEPLITHHGRI-LAGEFSPDGGRFLIVCD---DNHVRTYH 1210

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAF----------------TKFSGEKFAIGVM 376
            +   +                +SP G  I                    ++       + 
Sbjct: 1211 TLSGEPASPPISLPHPVSCAHFSPDGARILTGCGVPMPLIENDAKTSVTWNHTTGEAQLW 1270

Query: 377  KKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
                    L        +    +SP G+ ++
Sbjct: 1271 DATSGTPVLASFPHQGRVSTAAFSPDGKRIV 1301



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 91/268 (33%), Gaps = 37/268 (13%)

Query: 195  VMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V   D  N  + L     + +    FS +  K+  +  D+    +  + D    +  + I
Sbjct: 848  VFHWDLENSTQSLELKHPETVRHLNFSRDGSKLVSSGQDN----QARVWDLATGKLLQSI 903

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPD 312
             +   +  A +FS +G++ LI   +D+A      DL ++               A++SP 
Sbjct: 904  RHE--IQFAAQFSPDGRQLLICPIQDQAQ---LFDLATSKPSGPAMPHAGTITHATFSPA 958

Query: 313  SSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEA----------SYFDPVWSPQGDL 360
            S+ I     S R+ +           +  R+   +            +     +S  G  
Sbjct: 959  SNLILTASGSYRDDRSDF---DYAYDNTLRLWDGQSGDPIGNPMLHDNVTQVSFSADGGF 1015

Query: 361  IAFTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGS 416
            I          + +   K   +   L    S ++  T   + P G  L +     G   +
Sbjct: 1016 ILSASTDRARVWDVFTQKPASTAVDLSDTTSFVREGTNTGFRPDG--LAYVTTVSG-YKA 1072

Query: 417  KLYSIDLNGRNETLINTPAYASDPQWVG 444
             L+   L+G   T + +P Y  D  ++ 
Sbjct: 1073 VLWDT-LSG---TPLGSPLYHQDSVYLA 1096



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 74/231 (32%), Gaps = 25/231 (10%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             D A  + L   R +I F  +FSP+ +++      D    +  L D    +         
Sbjct: 892  WDLATGKLLQSIRHEIQFAAQFSPDGRQLLICPIQD----QAQLFDLATSKPSGPAMPHA 947

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-----------IS 306
              I    FS      +++       D    D   + T RL +    +             
Sbjct: 948  GTITHATFSP-ASNLILTASGSYRDDRSDFDYAYDNTLRLWDGQSGDPIGNPMLHDNVTQ 1006

Query: 307  ASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDLIA 362
             S+S D   I+  S DR     ++  +   +        S  +E +       P G  +A
Sbjct: 1007 VSFSADGGFILSASTDRARVWDVFTQKPASTAVDLSDTTSFVREGTNTGFR--PDG--LA 1062

Query: 363  FTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +        A+      G+     L    ++    +SP G  L+   ++DG
Sbjct: 1063 YVTTVSGYKAVLWDTLSGTPLGSPLYHQDSVYLAVFSPDGSRLLTYSERDG 1113



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 82/307 (26%), Gaps = 61/307 (19%)

Query: 130  LWDVK----DRKQIIGKK---FFSSPASWRKIAHTISDDIYQSITGEKGD---FNSRILF 179
            LWD        + + G+       SP     +A  I +DI+  I    G    ++     
Sbjct: 1116 LWDSNTSAPSGEYLAGRGSDHVQFSPDGRHLLA--ICNDIHYGIATSPGIVQRWDYASRT 1173

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-----PR--------------FS 220
            + E +++   +        DG     +        +      P               FS
Sbjct: 1174 LLEPLITHHGRILAGEFSPDGGRFLIVCDDNHVRTYHTLSGEPASPPISLPHPVSCAHFS 1233

Query: 221  PNQQKVAY---------------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            P+  ++                 +   +       L D             +  +    F
Sbjct: 1234 PDGARILTGCGVPMPLIENDAKTSVTWNHTTGEAQLWDATSGTPVLASFPHQGRVSTAAF 1293

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESD--- 321
            S +GKR + +  +D    ++  D  S      +         AS+S D   ++  S    
Sbjct: 1294 SPDGKRIV-TACEDRTARLW--DASSGQPLGAVMLHEAPVNHASFSADGRMLLTGSGIPR 1350

Query: 322  REGK---EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----KFSGEKFAI 373
            R+G        +  +            E +     +SPQG+          +       +
Sbjct: 1351 RDGGRFAGSARLWDAATGRSLAPPYATEKTVRQVQFSPQGNNFLTISCQEDRADDTHHHL 1410

Query: 374  GVMKKDG 380
                 D 
Sbjct: 1411 WSTSADS 1417


>gi|331649515|ref|ZP_08350601.1| conserved hypothetical protein [Escherichia coli M605]
 gi|330908008|gb|EGH36527.1| uncharacterized protein YidR [Escherichia coli AA86]
 gi|331042013|gb|EGI14157.1| conserved hypothetical protein [Escherichia coli M605]
          Length = 416

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +          +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWMED------GQLWITETD 415



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 415



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 40/114 (35%), Gaps = 8/114 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +    D 
Sbjct: 310 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 364

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            I   +     ++   +   N  S   A  FS +G+       +D  + I   D
Sbjct: 365 RIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW--MEDGQLWITETD 415


>gi|284053126|ref|ZP_06383336.1| WD-40 repeat-containing serine/threonin protein kinase [Arthrospira
           platensis str. Paraca]
          Length = 569

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 60/177 (33%), Gaps = 11/177 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG    S+ ++D D   +       +Q +     +P  + +A           + + D
Sbjct: 402 VASGQTDGSINLVDIDTGTVVNTLSGHNQPVGTIAIAPEGRFLA----SAGGDGTIRIWD 457

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R  + +   RS + A  FS +G     S   D ++ ++  ++ +   ER       
Sbjct: 458 LWNSRLVRVLPGHRSWVHALAFSPDGASLA-SAGGDGSIRLW--NVDTGFEERTLRGYGE 514

Query: 304 NISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            I A  +S +   ++  S       L +        +R       + +    SP G 
Sbjct: 515 QIQAIVFSANGEMLISGSS---NGLLELWDRETGQLRRSLAAHPQAIWSLAVSPDGQ 568


>gi|15898881|ref|NP_343486.1| Tricorn protease (tri) [Sulfolobus solfataricus P2]
 gi|11387136|sp|P95871|TRI_SULSO RecName: Full=Tricorn protease homolog
 gi|1707703|emb|CAA69507.1| orf c06024 [Sulfolobus solfataricus P2]
 gi|13815384|gb|AAK42276.1| Tricorn protease (tri) [Sulfolobus solfataricus P2]
          Length = 1068

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 49/116 (42%), Gaps = 4/116 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +++  ++   K +L+V + +  + + I + +     +  W P  +  A+    G 
Sbjct: 428 SPDGKKVLLSNN---KLELWVYEIDNDNARLIDKSEYDLILEFDWHPNAEWFAYAFPEGY 484

Query: 370 -KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +I +   DG   R+        +P++ P GR L F   +  D  +     +L+
Sbjct: 485 YTQSIKLAHIDGKVVRITTPYGYDFSPSFDPDGRYLYFLAARHLDPTNDKVIFNLS 540



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 104/263 (39%), Gaps = 36/263 (13%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G  K  L +   DG        S D  +  P     +++V + + D E +  +Y +
Sbjct: 218 KGYKGGTKGELWIS-SDGGKTFEKFVSLDGNVSWPMIV--RERVYFLS-DHEGVGNLYSV 273

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D +  +  +R  NF         SS+GKR +       A DIY  D + ++  +L   L 
Sbjct: 274 DLK-GKDLRRHTNFTDYYCRNA-SSDGKRIVFQ----NAGDIYLYDPEKDSLTKLDINLP 327

Query: 303 INI---SASYSP----------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +       +            + + I   S    + ++++M+       ++ + +   Y
Sbjct: 328 TDRKKKQPKFVNVMEYMNEAVVNGNYIALVS----RGKVFLMRPWDGPSVQLGKKQGVKY 383

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                 P GD+I       ++  + ++ KDGS++ +  + S ++    SP G+ ++ S  
Sbjct: 384 RQIQVLPNGDVIGV----NDEDKLVILGKDGSEKVINKDFSRIERVKVSPDGKKVLLSNN 439

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           K      +L+  +++  N  LI+
Sbjct: 440 K-----LELWVYEIDNDNARLID 457



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 67/232 (28%), Gaps = 59/232 (25%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FS 266
            S   +   P+ SP+ +KVA++    +   +   +    D   +R+  F S       + 
Sbjct: 97  TSGLGVSTRPKISPSGRKVAFSVIWLKSGKQGGDIYVVEDGQARRVTYFGSRNSRVAGWI 156

Query: 267 SNGKRALISVQKD---EAMDIYSVDLQSNATERLTNT---------------LFINISAS 308
           S  +  +I+       +  + Y V++ +  TE+L                         +
Sbjct: 157 SEDEIIVITDFHTPFIQWTEAYKVNVNNGKTEKLPFGMLSNIVIKDDIIVIARGYQDLPN 216

Query: 309 Y-------------SPDSSQ---------------------IVFESDREGKEQLYVMQSN 334
           +             S D  +                     + F SD EG   LY +   
Sbjct: 217 WKGYKGGTKGELWISSDGGKTFEKFVSLDGNVSWPMIVRERVYFLSDHEGVGNLYSVDLK 276

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           G D +R        Y+    S  G  I F         I +   +      L
Sbjct: 277 GKDLRR--HTNFTDYYCRNASSDGKRIVFQNAGD----IYLYDPEKDSLTKL 322



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 58/199 (29%), Gaps = 40/199 (20%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDR 322
            +  G     +   D    ++ + L+     R+T+ L ++     SP   ++ F     +
Sbjct: 68  PDIRGDLISFTSDDD----VWLLSLKDMKPLRITSGLGVSTRPKISPSGRKVAFSVIWLK 123

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVM 376
            GK+   +        +R++     +     W  + ++I  T F        E + + V 
Sbjct: 124 SGKQGGDIYVVEDGQARRVTYFGSRNSRVAGWISEDEIIVITDFHTPFIQWTEAYKVNVN 183

Query: 377 KKDGSQERLLV---------------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              G  E+L                        P W            K G  G    S 
Sbjct: 184 N--GKTEKLPFGMLSNIVIKDDIIVIARGYQDLPNW---------KGYKGGTKGELWISS 232

Query: 422 DLNGRNETLINTPAYASDP 440
           D     E  ++     S P
Sbjct: 233 DGGKTFEKFVSLDGNVSWP 251



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 56/145 (38%), Gaps = 6/145 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +  +  V+    ++ L ++ +DG+  + +     +I    + SP+ +KV  +    E  L
Sbjct: 388 VLPNGDVIGVNDEDKLVILGKDGS-EKVINKDFSRIERV-KVSPDGKKVLLSNNKLE--L 443

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            VY +D    R   +  +   +IL   +  N +    +  +        +        R+
Sbjct: 444 WVYEIDNDNARLIDK--SEYDLILEFDWHPNAEWFAYAFPEGYYTQSIKLAHIDGKVVRI 501

Query: 298 TNTLFINISASYSPDSSQIVFESDR 322
           T     + S S+ PD   + F + R
Sbjct: 502 TTPYGYDFSPSFDPDGRYLYFLAAR 526



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 85/227 (37%), Gaps = 29/227 (12%)

Query: 221 PN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-- 276
           P+     +++ + DD     V+L+  + D  P RI +   +   P+ S +G++   SV  
Sbjct: 68  PDIRGDLISFTSDDD-----VWLLSLK-DMKPLRITSGLGVSTRPKISPSGRKVAFSVIW 121

Query: 277 --QKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV---FESDREGKEQLYV 330
                +  DIY V  +     R+T     N   A +  +   IV   F +      + Y 
Sbjct: 122 LKSGKQGGDIYVV--EDGQARRVTYFGSRNSRVAGWISEDEIIVITDFHTPFIQWTEAYK 179

Query: 331 MQSNGSDQKRISQD---KEASYFDPVWSPQG--DLIAFTKFSGEKFAIGVMKKDGSQ--E 383
           +  N    +++            D +   +G  DL  +  + G       +  DG +  E
Sbjct: 180 VNVNNGKTEKLPFGMLSNIVIKDDIIVIARGYQDLPNWKGYKGGTKGELWISSDGGKTFE 239

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           + +  D N+  P        + F    +G     LYS+DL G++   
Sbjct: 240 KFVSLDGNVSWPMIVR--ERVYFLSDHEG--VGNLYSVDLKGKDLRR 282


>gi|325923340|ref|ZP_08185011.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           gardneri ATCC 19865]
 gi|325546160|gb|EGD17343.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           gardneri ATCC 19865]
          Length = 774

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/277 (13%), Positives = 82/277 (29%), Gaps = 61/277 (22%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR------------------------- 252
            +SP+ +K+A    D      +YL+ T++     +                         
Sbjct: 213 AWSPDSRKIATFQQDQRKTGDMYLVSTKLGHPELQSWKYPLAGDKDVTMIERVVIDVPTR 272

Query: 253 -------------------IGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQS 291
                              +     +    +++ +GK      + +  +   +   D+ +
Sbjct: 273 SVLRLKLPPDQHRSTLCDDVSCSPGLWDDVKWAPDGKTLAFASTSRFHKQTWLRIADVAT 332

Query: 292 NATERL------TNTLFINISASYS--PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                       T      ++A+++  P S++ ++ S+R    QLY+        KR   
Sbjct: 333 GEVRTAFDETAKTYYESGQVAANWTYLPGSNEAIWFSERSDWGQLYLYDLGTGKPKRAIT 392

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKDGSQERLLVEDSNLQAPT 396
             E +  + +        A+    G           +  +  DG +  LL  +    +  
Sbjct: 393 TGEGNVTELLRVDPVTRTAWFVGVGRTPGVDPYYQQLWKVSLDGGEPVLLTPEVADHSIA 452

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            SP G   + +          L     +GR  + I T
Sbjct: 453 LSPDGARFVDTYSTSVTPPVTLLRNAGDGRTVSTIAT 489



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 26/89 (29%), Gaps = 21/89 (23%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS----------------NLQA 394
             V SP     AF +     + + V      QE  L  D                 +   
Sbjct: 156 PGVPSPDKRSEAFIR----NWNLWVRDLASGQETQLTRDGVENFGYATDNAGWQHSDNAI 211

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             WSP  R +  + ++D      +Y +  
Sbjct: 212 VAWSPDSRKIA-TFQQDQRKTGDMYLVST 239



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 48/181 (26%), Gaps = 65/181 (35%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP--------------VWS 355
           SPD     F         L+V       + ++++D   ++                  WS
Sbjct: 160 SPDKRSEAFIR----NWNLWVRDLASGQETQLTRDGVENFGYATDNAGWQHSDNAIVAWS 215

Query: 356 PQGDLIAF----TKFSGEKFAI-----------GVMKKDGSQERLLVEDSNLQAPT---- 396
           P    IA      + +G+ + +                 G ++  ++E   +  PT    
Sbjct: 216 PDSRKIATFQQDQRKTGDMYLVSTKLGHPELQSWKYPLAGDKDVTMIERVVIDVPTRSVL 275

Query: 397 ----------------------------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                                       W+P G++L F+        + L   D+     
Sbjct: 276 RLKLPPDQHRSTLCDDVSCSPGLWDDVKWAPDGKTLAFASTSRFHKQTWLRIADVATGEV 335

Query: 429 T 429
            
Sbjct: 336 R 336


>gi|206972269|ref|ZP_03233216.1| putative prolyl oligopeptidase family protein [Bacillus cereus
           AH1134]
 gi|206732843|gb|EDZ50018.1| putative prolyl oligopeptidase family protein [Bacillus cereus
           AH1134]
          Length = 654

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 96/293 (32%), Gaps = 45/293 (15%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++        +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 32  VAFVKKTADWKDNTYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDARCIAYLSPVGD 90

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQS-- 291
              ++++     D +  +I + +  +    +   GK      Q  E  +I    DL    
Sbjct: 91  GENQIFVKSLD-DYSEVQITDEKEGVSTFEWGPTGKELYYVTQSKECEEIKKRKDLYGDF 149

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  +     +I I           V +SD +  E   V         +++  K+  
Sbjct: 150 QHIGKEHQNNCLYYIEIE---------KVIQSDTDEHENRVVY--------QLTDGKDFH 192

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWSPSG 401
             +   S  G  + F               + ++     + + L V+     +  +SP G
Sbjct: 193 IHEFDISNDGKKVVFMATPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPDG 252

Query: 402 RSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
             + ++         R    D+  ++Y I+  G     +        P QW  
Sbjct: 253 SKICYTASIREKDYYRNHIQDSTLEIYDIN-TGEVIQPVTDFDSTVMPLQWTA 304


>gi|300868641|ref|ZP_07113253.1| hypothetical protein OSCI_3790001 [Oscillatoria sp. PCC 6506]
 gi|300333335|emb|CBN58445.1| hypothetical protein OSCI_3790001 [Oscillatoria sp. PCC 6506]
          Length = 830

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 73/220 (33%), Gaps = 13/220 (5%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             R+        ++   FSP+ + +A  + D+       L  T             + + 
Sbjct: 386 RERHTFTGHTNSVWSVSFSPDGKFLATGSGDN----TAKLWSTETKTELYTFTGHTNWVT 441

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +  FSS+GK    +   D    ++S++ ++     + ++  +  S S S D   +   S+
Sbjct: 442 SVSFSSDGKFLA-TGSYDNTAKLWSIETKAELHTFIGHSQSV-TSVSLSADGKYLATGSE 499

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                   +       +         S      S  G  +A T        +  ++   +
Sbjct: 500 ---DNTAKLWSIETKAELHTFIGHSQSVRSVSLSADGKYLA-TGSDDNTAKLWSIETKEA 555

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +    ++++ + S  G+ L        D  +KL+S 
Sbjct: 556 LHTFIGHTQSVRSVSLSVDGKYLATGSW---DKTAKLWST 592



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 65/220 (29%), Gaps = 10/220 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G   N+  +   +     Y        +    FS + + +A  +YD+       L    
Sbjct: 412 TGSGDNTAKLWSTETKTELYTFTGHTNWVTSVSFSSDGKFLATGSYDN----TAKLWSIE 467

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                         + +   S++GK    +  +D    ++S++ ++     + ++  +  
Sbjct: 468 TKAELHTFIGHSQSVTSVSLSADGKYLA-TGSEDNTAKLWSIETKAELHTFIGHSQSV-R 525

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S S S D   +   SD        +      +          S      S  G  +A   
Sbjct: 526 SVSLSADGKYLATGSD---DNTAKLWSIETKEALHTFIGHTQSVRSVSLSVDGKYLATGS 582

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +      +            +   +++ + + S  G  L 
Sbjct: 583 WDKTA-KLWSTATKAGIHTFIGHTNSIWSVSLSSDGNYLA 621



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 81/228 (35%), Gaps = 24/228 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAP 263
           +        ++    S +   +A  + D  +  +V+L +T+ +        +    +++ 
Sbjct: 599 HTFIGHTNSIWSVSLSSDGNYLATGSSD--NTAKVWLTETKKELHTFTCQTDLVMSVMSV 656

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S++GK    +   D+   ++S   ++     + +T ++  S S S D   +   S+  
Sbjct: 657 SLSADGKYLA-TGSWDKTAKLWSTATKAEIHTFIGHTNWV-WSVSLSADGKYLATGSE-- 712

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-- 381
             +   +      +  +       S      S  G  +A   F      + +    G+  
Sbjct: 713 -DKTAKLWSIETKEALQTFTGHTHSVRSVSLSADGKYLATGSFDNT---VKLWDLSGNLI 768

Query: 382 ----QERLLVEDSNLQAPTWS----PSGRSLIFSRKKDGDTGSKLYSI 421
                 +  V+   +++P +S    P G+ L  +   DG    +L+ I
Sbjct: 769 ADFIGYKDGVQFIEIESPVFSVCFTPDGKYLA-AGYDDG--VVRLWPI 813


>gi|73670060|ref|YP_306075.1| surface antigen gene [Methanosarcina barkeri str. Fusaro]
 gi|72397222|gb|AAZ71495.1| surface antigen protein [Methanosarcina barkeri str. Fusaro]
          Length = 479

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 101/271 (37%), Gaps = 14/271 (5%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           GD+N R  + + +    +   S+ V+D    N+    P  D         P   +V  A+
Sbjct: 45  GDYNQRGYYYNTNYNGTVPTPSVAVIDTATNNVTARVPLGDGWPIGVAVDPAGTRVYVAS 104

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              +D   VY++DT  +    ++    S      F+  G R  ++ Q+D   DI  ++  
Sbjct: 105 ATIDDACIVYVIDTATNTVNTKVNIRSSYPSGITFNPAGTRVYVTKQRD-NTDISVINTA 163

Query: 291 SNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +N     +        + +++PD  +I   +       +YV+ +  +         ++ Y
Sbjct: 164 TNTLMAPIIVGPST-YNVAFTPDGKKIYAAN--SHNNTIYVIDAATNKVTANVPVGDSPY 220

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSR 408
            + V +P G  +    ++    A+ V+          V   +  +  T +  G  +  + 
Sbjct: 221 -EVVVTPDGKKVYVPNYNSS--AVSVIDTATDNVTATVPVGDSPRRVTVTSDGNKVYVAN 277

Query: 409 KK-----DGDTGSKLYSIDLNGRNETLINTP 434
                  D  T + + ++ +   +  ++ +P
Sbjct: 278 NNTVSVIDTATDTVIATVPVGTSSREIVISP 308


>gi|299754955|ref|XP_001828317.2| NB-ARC [Coprinopsis cinerea okayama7#130]
 gi|298411002|gb|EAU93494.2| NB-ARC [Coprinopsis cinerea okayama7#130]
          Length = 1612

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/315 (15%), Positives = 88/315 (27%), Gaps = 43/315 (13%)

Query: 109  QVLVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI 162
              +V   V       L          RLW  +  + + G    S             D  
Sbjct: 1208 HSVVVTSVAFSPNGTLLASGSHDATIRLWSPQTGEALDGTLLASGS----------YDHT 1257

Query: 163  YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSP 221
             +    + G+     L       SG    ++ + + + G  +        + +    FSP
Sbjct: 1258 IRLWNPQTGEALDGTLLA-----SGSYDGTIRLWNSQTGEALGEPLQGHSRWVASVVFSP 1312

Query: 222  NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            +   +A  +YD    +R++   T        +      + +  FS  G     S   D  
Sbjct: 1313 DGTLLASGSYD--STIRLWKPQTGEALGG-PLQGHSGAVASVAFSPEGTLLA-SGSYDNT 1368

Query: 282  MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KR 340
            + +          E L        S ++SPD + +   S       + +      +    
Sbjct: 1369 IRLCGPQTVGALGEPLQGHSDGVTSVAFSPDGTLLASGS---WDTTIRLWSPQTGEALGE 1425

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQAPT- 396
              Q          +SP G L+A   + G    I +      +     LL   S       
Sbjct: 1426 PLQGHSGQVTSVAFSPDGTLLASGLYDGT---IRLWNPQTGKALDGTLLASGSWDTTIRL 1482

Query: 397  WSP------SGRSLI 405
            WSP       G  L 
Sbjct: 1483 WSPQTGEALDGTLLA 1497



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 99/314 (31%), Gaps = 24/314 (7%)

Query: 120  GKDRLRVEFRLWDVKDRKQII----GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
                     RLW+ +  + +     G     +  ++      ++   +       G   +
Sbjct: 1114 ASGSYDNTIRLWNPQTGEALGEPLQGHSHQVTSVAFSPDGTLLASGSHDGTIRLWGP-QT 1172

Query: 176  RILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                    + SG   N++ + + + G  +         ++    FSPN   +A  ++D  
Sbjct: 1173 GGALDGTLLASGSWDNTIRLWNPQTGEALGEPLQGHSVVVTSVAFSPNGTLLASGSHDA- 1231

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS------NGKRALISVQKDEAMDIYSVD 288
              +R++   T        + +         ++       +G     S   D  + ++  +
Sbjct: 1232 -TIRLWSPQTGEALDGTLLASGSYDHTIRLWNPQTGEALDGTLLA-SGSYDGTIRLW--N 1287

Query: 289  LQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
             Q+     E L        S  +SPD + +   S  +   +L+     G       Q   
Sbjct: 1288 SQTGEALGEPLQGHSRWVASVVFSPDGTLLASGSY-DSTIRLWK-PQTGEALGGPLQGHS 1345

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
             +     +SP+G L+A   +       G        E L      + +  +SP G  L  
Sbjct: 1346 GAVASVAFSPEGTLLASGSYDNTIRLCGPQTVGALGEPLQGHSDGVTSVAFSPDGTLLAS 1405

Query: 407  SRKKDGDTGSKLYS 420
                  DT  +L+S
Sbjct: 1406 GSW---DTTIRLWS 1416



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/345 (13%), Positives = 100/345 (28%), Gaps = 61/345 (17%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     RLW+ +  K + G    S            +    +++ G     ++++  
Sbjct: 910  ASGSYDGTIRLWNPQTGKALDGTLLASGLDD--CTIRLWNPQTGEALGGPLKGHSAQVTS 967

Query: 180  VSESV-----VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            V+ S       SG   N++ + + + G  +          +    FSP+   +A  ++D 
Sbjct: 968  VAFSPDGTLLASGSWDNTIRLWNPQTGEALGEPLQDHSAAVTSVAFSPDGTLLASGSWDT 1027

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               +R++   T  D   + +    + + +  FS +G     S   D  + ++  + Q+  
Sbjct: 1028 --TIRLWNPQTG-DALGEPLQGHSNWVTSVAFSPDGTLLA-SGSWDNTIRLW--NPQTGE 1081

Query: 294  T---ERLTNTLFINISASYSPD------SSQIVFESDREGKEQLYVMQSNGSDQ-KRISQ 343
                  L +         + P        + +   S       + +      +      Q
Sbjct: 1082 ALGGTLLASGSHDGTIRLWGPQTGGALEGTLLASGSY---DNTIRLWNPQTGEALGEPLQ 1138

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQ------- 393
                      +SP G L+A     G    I +            LL   S          
Sbjct: 1139 GHSHQVTSVAFSPDGTLLASGSHDGT---IRLWGPQTGGALDGTLLASGSWDNTIRLWNP 1195

Query: 394  ------------------APTWSPSGRSLIFSRKKDGDTGSKLYS 420
                              +  +SP+G  L        D   +L+S
Sbjct: 1196 QTGEALGEPLQGHSVVVTSVAFSPNGTLLASGSH---DATIRLWS 1237



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 74/246 (30%), Gaps = 45/246 (18%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     RLW  +  + + G                        + G  G   S    
Sbjct: 1318 ASGSYDSTIRLWKPQTGEALGG-----------------------PLQGHSGAVASVAFS 1354

Query: 180  VSESV-VSGIIKNSLCVMDRD--GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               ++  SG   N++ +      GA    L    D +     FSP+   +A  ++D    
Sbjct: 1355 PEGTLLASGSYDNTIRLCGPQTVGALGEPLQGHSDGVTSV-AFSPDGTLLASGSWDT--T 1411

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-- 294
            +R++   T  +   + +      + +  FS +G     S   D  + ++  + Q+     
Sbjct: 1412 IRLWSPQTG-EALGEPLQGHSGQVTSVAFSPDGTLLA-SGLYDGTIRLW--NPQTGKALD 1467

Query: 295  -ERLTNTLFINISASYSP------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
               L +  +      +SP      D + +   S       + +  +       +     +
Sbjct: 1468 GTLLASGSWDTTIRLWSPQTGEALDGTLLASGSH---DNTIRLWNTAHYQHSHLQHFDSS 1524

Query: 348  SYFDPV 353
            ++ D V
Sbjct: 1525 NFQDQV 1530


>gi|197286689|ref|YP_002152561.1| hypothetical protein PMI2860 [Proteus mirabilis HI4320]
 gi|194684176|emb|CAR45634.1| conserved hypothetical protein [Proteus mirabilis HI4320]
          Length = 428

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 60/174 (34%), Gaps = 27/174 (15%)

Query: 267 SNGKRALISVQKD----EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDS 313
            +      S++ D              Q     RLTNT       +      +   SP  
Sbjct: 259 PDDDH-AFSLEGDKPLAGTETTMPAPAQGIEQIRLTNTHHRKYPGVLNQPRHWLRSSPQG 317

Query: 314 SQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             I F   D  G  QLY +       ++++  +        WS  G+ + F   +    +
Sbjct: 318 DAIAFLMKDDNGVVQLYTVSPATKAIRQVTSQQWDIQSAFTWSYSGEYLTFICDN----S 373

Query: 373 IGVMKKDGSQERLLVEDSNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +      +   L  D   QAP+     +SP+ + + F R  DG    +++++
Sbjct: 374 VMLCNAKTGELTRLT-DKTAQAPSGDAVVFSPNDQYIAFMRDIDGYR--QIFTV 424



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 68/210 (32%), Gaps = 21/210 (10%)

Query: 139 IIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDF-----NSRILFVSESVVSGIIKNS 192
           I  + +  +  +  R     I D + +S       F     +    F  E         +
Sbjct: 219 IGKQGYTKADGSQQRWAIAFIGDTVSESGEKVADIFLVDLPDDDHAFSLEGDKPLAGTET 278

Query: 193 LCVMDRDGANIRYLTPSRD----QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDT 244
                  G     LT +       +L +PR     SP    +A+   DD  ++++Y +  
Sbjct: 279 TMPAPAQGIEQIRLTNTHHRKYPGVLNQPRHWLRSSPQGDAIAFLMKDDNGVVQLYTVSP 338

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +       +  A  +S +G+             +   + ++    RLT+     
Sbjct: 339 ATKAIRQVTSQQWDIQSAFTWSYSGEYLTFICDNS----VMLCNAKTGELTRLTDKTAQA 394

Query: 305 ISA---SYSPDSSQIVFESDREGKEQLYVM 331
            S     +SP+   I F  D +G  Q++ +
Sbjct: 395 PSGDAVVFSPNDQYIAFMRDIDGYRQIFTV 424


>gi|109113695|ref|XP_001105419.1| PREDICTED: WD repeat and SOCS box-containing protein 1 isoform 6
           [Macaca mulatta]
          Length = 421

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC---SVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 268 GALLATASYDT---RVYIWDPHNGD--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 322

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 323 GLHIA---SLADDKMVRFWRIDED 343



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 80/259 (30%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++           R +  T + D               ++ VS S   
Sbjct: 151 RIKIWDVYTGKLLL--NLVDHTEVVRDL--TFAPD-------------GSLILVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L +   
Sbjct: 194 TL---RVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSMLCSV----GASKAVFLWNMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + I+  D  +               
Sbjct: 246 YTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFPPPT 302

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   I   +D +   + + +  +     +++          
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHIASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 357

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 358 AFSTDGSVLAAGTHDGSVY 376



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L +   +    +++PD S I+  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K + +  +   +   +SP   ++     S   F +  M K     +L     
Sbjct: 200 LKDDGNMMKVL-RGHQNWVYSCAFSPDSSMLCSVGASKAVF-LWNMDKYTMIRKLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 258 DVVACDFSPDGALLATASY 276


>gi|332282523|ref|ZP_08394936.1| conserved hypothetical protein [Shigella sp. D9]
 gi|332104875|gb|EGJ08221.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 416

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 403


>gi|283781623|ref|YP_003372378.1| cytochrome C [Pirellula staleyi DSM 6068]
 gi|283440076|gb|ADB18518.1| Planctomycete cytochrome C [Pirellula staleyi DSM 6068]
          Length = 953

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 66/210 (31%), Gaps = 15/210 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS + + VA    +   I    L+ T      + +   +  + + R S +G   L +   
Sbjct: 200 FSRDGKIVAAGAGEPGLIGETTLLSTATGEVLRTLRGQKDSVYSLRLSPDG-SILATGSY 258

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + ++ V         L          ++  D   +   S   G   + +       +
Sbjct: 259 DNTIALWDV-ASGKLLRSLDGHGGAIYDIAFRSDGKVLASAS---GDRTVKLWNVADGSR 314

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               ++     +   +SP G  +A          + +     +G+   LL      +   
Sbjct: 315 LETLKESTKELYSIAFSPDGKRVAAAGVDNRIRVWQVSDQALEGTNP-LLYSQFAHELAV 373

Query: 397 ----WSPSGRSLIFSRKKDGDTGSKLYSID 422
               WS  G +++       D   K+++ D
Sbjct: 374 LRLDWSSDGETIV---STAEDRQIKVWNAD 400



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 61/200 (30%), Gaps = 27/200 (13%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     LWDV   K +                      IY       G        
Sbjct: 254 ATGSYDNTIALWDVASGKLLRSLDGHGGA-------------IYDIAFRSDGK------- 293

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +  SG     L  +  DG+ +  L  S  + L+   FSP+ ++VA A  D+   +  
Sbjct: 294 -VLASASGDRTVKLWNV-ADGSRLETLKESTKE-LYSIAFSPDGKRVAAAGVDNRIRVWQ 350

Query: 240 YLMDTRIDRAPKRIGNF--RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                     P     F     +L   +SS+G+  + S  +D  + +++ D  +     L
Sbjct: 351 VSDQALEGTNPLLYSQFAHELAVLRLDWSSDGETIV-STAEDRQIKVWNADDMTIRAV-L 408

Query: 298 TNTLFINISASYSPDSSQIV 317
                     +  P   ++V
Sbjct: 409 EKQSDWATGVAIVPSGDRVV 428


>gi|261879413|ref|ZP_06005840.1| dipeptidyl-peptidase IV [Prevotella bergensis DSM 17361]
 gi|270333981|gb|EFA44767.1| dipeptidyl-peptidase IV [Prevotella bergensis DSM 17361]
          Length = 736

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 57/155 (36%), Gaps = 25/155 (16%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +  A  SPD +QIV  S + GK+   +   N +  + ++     ++   V SP G  +
Sbjct: 47  GTDQYAQVSPDGTQIVQYSFKTGKQTGILFDVNQTQGETLT-----AFDGYVMSPDGKRM 101

Query: 362 --------AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                    + +     F I  +     +   L E    Q P WSP G  + F R  +  
Sbjct: 102 LIRTKTEPIYRRSYKAVFYIYTI--QSRKLEKLSEGGPQQTPVWSPDGNKVAFVRDNNIF 159

Query: 414 TGSKLYS-----IDLNGRNETLINTPAYASDPQWV 443
               LY      +  +G+   +IN       P WV
Sbjct: 160 LVKLLYDNSESQVTKDGQFNQVIN-----GIPDWV 189



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 86/257 (33%), Gaps = 49/257 (19%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +      + SP+  ++   ++       +     +       +  F   ++    S +GK
Sbjct: 46  EGTDQYAQVSPDGTQIVQYSFKTGKQTGILFDVNQTQGET--LTAFDGYVM----SPDGK 99

Query: 271 RALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           R LI        ++      Y   +QS   E+L+       +  +SPD +++ F  D   
Sbjct: 100 RMLIRTKTEPIYRRSYKAVFYIYTIQSRKLEKLSEG-GPQQTPVWSPDGNKVAFVRD--- 155

Query: 325 KEQLYVMQSNGSDQKRISQDKEASY---FDPVW--------------SPQGDLIAFTKFS 367
                V     + + ++++D + +      P W              +  G ++ + ++ 
Sbjct: 156 NNIFLVKLLYDNSESQVTKDGQFNQVINGIPDWVNEEEFSFSSAMTFNADGTMLCWIRYD 215

Query: 368 GEK---FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK--LYSID 422
                 +++ + K    + +      N   P+         +   K G+  SK  ++S D
Sbjct: 216 ETDVKEYSLQMFKGTNPEMK-----DNEVYPS------MYSYKYPKAGEKNSKVSVWSFD 264

Query: 423 LNGRNETLINTPAYASD 439
              R    +N P    D
Sbjct: 265 TQSRRTQKLNIPLGDED 281



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 55/398 (13%), Positives = 125/398 (31%), Gaps = 101/398 (25%)

Query: 114 GRVIKEGKDRLRVEFR-------LWDVKD--RKQIIG-KKFFSSPASWRKIAHTISDDIY 163
            +V  +G   ++  F+       L+DV     + +     +  SP   R +  T ++ IY
Sbjct: 52  AQVSPDGTQIVQYSFKTGKQTGILFDVNQTQGETLTAFDGYVMSPDGKRMLIRTKTEPIY 111

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +         + + +F   ++ S  ++                  S       P +SP+ 
Sbjct: 112 RR--------SYKAVFYIYTIQSRKLEKL----------------SEGGPQQTPVWSPDG 147

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---------------SMILAPRFSSN 268
            KVA+    D +I  V L+    +    + G F                S   A  F+++
Sbjct: 148 NKVAFV--RDNNIFLVKLLYDNSESQVTKDGQFNQVINGIPDWVNEEEFSFSSAMTFNAD 205

Query: 269 GKRALI---------------------------------------SVQKDEAMDIYSVDL 289
           G                                            + +K+  + ++S D 
Sbjct: 206 GTMLCWIRYDETDVKEYSLQMFKGTNPEMKDNEVYPSMYSYKYPKAGEKNSKVSVWSFDT 265

Query: 290 QSNATERLTNTLFI-NISASY--SPDSSQ-IVFESDREGKE-QLYVMQSNGSDQKRISQD 344
           QS  T++L   L   +       +PD+++ +V+  +R   E  LY +    +  K + ++
Sbjct: 266 QSRRTQKLNIPLGDEDYIPRILPTPDANRVMVYTMNRHQDELDLYTVNPRSTVAKLLIKE 325

Query: 345 KEASYFDPVWSP----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           +   Y             D +           + +   +G  +R + +        +   
Sbjct: 326 RVPKYVQESAMTSIRVGKDYVLLPSDRSGYMQLYLYDGNGQLQRTVGDGQYDITGVYGYD 385

Query: 401 GRS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            ++  + +          ++Y    NG+ + L +   +
Sbjct: 386 EKTGDVYYQAAALNPHDRQIYVSHKNGKTDRLTDREGW 423



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 95/299 (31%), Gaps = 34/299 (11%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGD----FNSRILFVSESVVSGIIKNSLCVM 196
            +   +    + ++ + I D + +             +  +L       + + + SL + 
Sbjct: 168 SESQVTKDGQFNQVINGIPDWVNEEEFSFSSAMTFNADGTMLCWIRYDETDVKEYSLQMF 227

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
              G N       +D  ++   +S    K      +    + V+  DT+  R  K     
Sbjct: 228 K--GTNPEM----KDNEVYPSMYSYKYPK----AGEKNSKVSVWSFDTQSRRTQKLNIPL 277

Query: 257 RSMILAPRF--SSNGKRA-LISVQKD-EAMDIYSVDLQSNATERLTNTL-------FINI 305
                 PR   + +  R  + ++ +  + +D+Y+V+ +S   + L               
Sbjct: 278 GDEDYIPRILPTPDANRVMVYTMNRHQDELDLYTVNPRSTVAKLLIKERVPKYVQESAMT 337

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-- 363
           S     D   ++  SDR G  QLY+   NG   +R   D +          +     +  
Sbjct: 338 SIRVGKD--YVLLPSDRSGYMQLYLYDGNG-QLQRTVGDGQYDITGVYGYDEKTGDVYYQ 394

Query: 364 -TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +     I V  K+G  +R L +        +S   R   F           +Y+ 
Sbjct: 395 AAALNPHDRQIYVSHKNGKTDR-LTDREGWNTAVFSADYRY--FVNTWSDRNTPYVYTT 450


>gi|194428076|ref|ZP_03060620.1| conserved hypothetical protein [Escherichia coli B171]
 gi|194413834|gb|EDX30112.1| conserved hypothetical protein [Escherichia coli B171]
          Length = 404

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWGRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 403



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 11/127 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +      R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+
Sbjct: 285 NVPRHWGRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGE 344

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQ 327
                +       I     QS   E LT       SA    +SPD   + +    EG  Q
Sbjct: 345 WLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-Q 396

Query: 328 LYVMQSN 334
           L++ +++
Sbjct: 397 LWITETD 403



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 305 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 363 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 391


>gi|18312464|ref|NP_559131.1| acylamino-acid-releasing enzyme, conjectural [Pyrobaculum
           aerophilum str. IM2]
 gi|18159923|gb|AAL63313.1| acylamino-acid-releasing enzyme, conjectural [Pyrobaculum
           aerophilum str. IM2]
          Length = 570

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 93/284 (32%), Gaps = 32/284 (11%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +  + FVS+    G  K  L + D    N  Y   S + +     +SP+  K+A+ +  D
Sbjct: 62  DGALAFVSDK--DGDEKWRLYLAD----NEVYEI-SAEGVNNLGAWSPDGLKLAFTSTRD 114

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                   +  R  R  ++I     + +   +S  G   +     +  +D      +   
Sbjct: 115 GQSDFNVYVYDRSLRKAEKIAEIPGINVVEEWSEAG---VFITHYETNLDSTIYLYKDGQ 171

Query: 294 TERLTNTLF--INISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYF 350
              LT      +N S  Y  +  +++F ++ + +   +  M  +  + K I Q       
Sbjct: 172 LRELTKHSGEALNHSPRYVGNG-KLLFLTNADWEYVGIAQMDLSTGNWKYIVQLDRDIEH 230

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFS-R 408
             VW   G  + F      +  +  M    G   +L      +    +   G  L FS  
Sbjct: 231 FDVW---GSYLIFAVNEEGRSGLYQMHIPSGLTYKLASPSGVVTHLDF-KDG-VLAFSLS 285

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYA------SDPQ--WVG 444
             +      +Y     G    + ++P +        +P   W  
Sbjct: 286 SINKGHEVYIYQ---QGAVRQITHSPKFGAPIHNIPEPASVWYP 326



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 84/242 (34%), Gaps = 21/242 (8%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +    PR  P    V Y   D    + ++  D         +  +   I   R S +G  
Sbjct: 11  RAATTPRRGPGG--VLYYLSDVTGHMLLWKFDGGKHD---VVLPWDDRIGDYRVSKDGA- 64

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLY 329
                 KD     + + L  N    + +   +N   ++SPD  ++ F S R+G+    +Y
Sbjct: 65  LAFVSDKDGDEK-WRLYLADNEVYEI-SAEGVNNLGAWSPDGLKLAFTSTRDGQSDFNVY 122

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +    ++I++    +  +  WS  G    F           +      Q R L + 
Sbjct: 123 VYDRSLRKAEKIAEIPGINVVEE-WSEAG---VFITHYETNLDSTIYLYKDGQLRELTKH 178

Query: 390 S---NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYA-SDPQWVG 444
           S      +P +  +G+ L+F    D +    +  +DL  G  + ++           W  
Sbjct: 179 SGEALNHSPRYVGNGK-LLFLTNADWEYVG-IAQMDLSTGNWKYIVQLDRDIEHFDVWGS 236

Query: 445 FM 446
           ++
Sbjct: 237 YL 238


>gi|298252180|ref|ZP_06975983.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297546772|gb|EFH80640.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 611

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 52/348 (14%), Positives = 113/348 (32%), Gaps = 48/348 (13%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF------RLWDVKD 135
           +       ++     +     W +      V   +      R  V        R+WD   
Sbjct: 300 VDVPEAPAEVKAAGRVI----WTARANHGAVR-SLSWSYDGRRLVSGGNDMQARVWDAST 354

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            K ++           R   HT++             ++ R L ++ +     +     V
Sbjct: 355 GKVLLSY------GGHRTGVHTVA-------------WSPRGLLIASAGYDPQVH----V 391

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                  I +   +  Q +    +S + Q++A  + D  D + V + D            
Sbjct: 392 WSATRGAIMHTFQAHTQPVKALAWSSDGQRLA--SVDGPDGM-VRVWDAMSGMQHATFKP 448

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSS 314
               + A  +S +G    ++  +D  + I+ V+   +     ++  F ++ A +++  +S
Sbjct: 449 QDKDVAALTWSPDGTCVAVA-SEDGGVQIWHVNTPRHHGRIFSDPSFASVQALAWASGNS 507

Query: 315 QIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +       G+EQ ++   +N    K +            WS  G L+A +  +     I
Sbjct: 508 YMA----SGGEEQVIHYWNTNTGRDKLLFSGHTQKILSLSWSQDGKLLA-SSSADGSVRI 562

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             ++          +   + A  WSP G  L      D D   +++ I
Sbjct: 563 WDVRTGACVFAYSSKHPPVHAVAWSPGGSLLACG---DADGSIQVWQI 607


>gi|16126393|ref|NP_420957.1| dipeptidyl peptidase IV [Caulobacter crescentus CB15]
 gi|221235174|ref|YP_002517610.1| Xaa-pro dipeptidyl-peptidase [Caulobacter crescentus NA1000]
 gi|13423647|gb|AAK24125.1| dipeptidyl peptidase IV [Caulobacter crescentus CB15]
 gi|220964346|gb|ACL95702.1| Xaa-pro dipeptidyl-peptidase [Caulobacter crescentus NA1000]
          Length = 738

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 53/359 (14%), Positives = 112/359 (31%), Gaps = 62/359 (17%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           +F   P         ++D     +T   GD     +      VS +   +L +    G  
Sbjct: 121 RFILVPLDGDLYLDAVADGKITRLTETPGDEVDAKVSPKGGYVSYVRDQNLYIKPVAGGA 180

Query: 203 IRYLTPSRDQILFEP----------------RFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              LT      L                    +SP++ ++ Y   D+  +  V   D   
Sbjct: 181 ETALTTDGKDALSFGVAEFIVQEELDRFTGYWWSPDESRIVYTRVDESGVDIVPRADIGP 240

Query: 247 DRAPKRIGNFR------------------SMILA-------------PRFSSNGKRALIS 275
             A      +                     + A               +S++GK   + 
Sbjct: 241 GGATVVNQRYPRAGRPNAVVDLFVRDLASGKVTALDLGANKDIYVARVAWSADGKTVYVQ 300

Query: 276 -VQKDE-AMDIYSVDLQSNATERL---TNTLFINISASYSP--DSSQIVFESDREGKEQL 328
            + +D+  +D+ + D  + A + +   T+  FI +S  + P  D +  ++ S+++G + L
Sbjct: 301 RLSRDQKTLDLLAFDAATGAGKTILTDTDPHFIEVSNDFRPLTDGT-FLWGSEKDGNQHL 359

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGVMKKDG---SQER 384
           Y   ++G    +I++  +          +   +A F+          + +       + +
Sbjct: 360 YRYAADGKLIAQITK-GDWPVIGLEGVDEARKVAIFSASIDTPIERRLYEVSYAKPGKPK 418

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQW 442
            L       A   + +G +       D  T S+      +G+    I     A   P W
Sbjct: 419 ALTSAGGWWAAKVADNGGAFA-GTYSDPKTPSQTALYSADGKRVRWIEENKLAEGHPYW 476



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 76/290 (26%), Gaps = 82/290 (28%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILA-------------- 262
             SP+ ++V Y     E      L    +    P R+ +  ++                 
Sbjct: 44  ALSPDGKRVTYLKGKPEAANIQDLWAADVKGGEPYRLIDSAALSSGDKELSEAEKARRER 103

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQS---------NATERLTNTLFINISASYSPDS 313
            R S+ G   ++    D       V L               RLT T    + A  SP  
Sbjct: 104 ARVSARG---IVEYSWDRQGRFILVPLDGDLYLDAVADGKITRLTETPGDEVDAKVSPKG 160

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQ 357
             + +  D    + LY+    G  +  ++ D + +    V                WSP 
Sbjct: 161 GYVSYVRD----QNLYIKPVAGGAETALTTDGKDALSFGVAEFIVQEELDRFTGYWWSPD 216

Query: 358 GDLIAFTKFSGEKFAI------------------------------GVMKKDGSQERLLV 387
              I +T+       I                               V      +   L 
Sbjct: 217 ESRIVYTRVDESGVDIVPRADIGPGGATVVNQRYPRAGRPNAVVDLFVRDLASGKVTALD 276

Query: 388 EDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLIN 432
             +N         WS  G+++   R         L + D   G  +T++ 
Sbjct: 277 LGANKDIYVARVAWSADGKTVYVQRLSRDQKTLDLLAFDAATGAGKTILT 326



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 66/205 (32%), Gaps = 52/205 (25%)

Query: 250 PKRIGNFRSMIL----APRFSSNGKRALISVQKDEAM---DIYSVDLQSNATERLTNTLF 302
           P+RI    S+          S +GKR      K EA    D+++ D++     RL ++  
Sbjct: 26  PERIFGDPSLSGPTARGVALSPDGKRVTYLKGKPEAANIQDLWAADVKGGEPYRLIDSAA 85

Query: 303 INIS--------------ASYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQKRI 341
           ++                A  S     + +  DR+G+  L  +  +            R+
Sbjct: 86  LSSGDKELSEAEKARRERARVSARG-IVEYSWDRQGRFILVPLDGDLYLDAVADGKITRL 144

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS----------- 390
           + +      D   SP+G  +++ +       + +    G  E  L  D            
Sbjct: 145 T-ETPGDEVDAKVSPKGGYVSYVRDQ----NLYIKPVAGGAETALTTDGKDALSFGVAEF 199

Query: 391 -------NLQAPTWSPSGRSLIFSR 408
                        WSP    ++++R
Sbjct: 200 IVQEELDRFTGYWWSPDESRIVYTR 224


>gi|332345680|gb|AEE59014.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 404

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 403



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 305 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 363 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 391


>gi|302503741|ref|XP_003013830.1| hypothetical protein ARB_07942 [Arthroderma benhamiae CBS 112371]
 gi|291177396|gb|EFE33190.1| hypothetical protein ARB_07942 [Arthroderma benhamiae CBS 112371]
          Length = 576

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +++     + +   +FSP+   +A  + D      + + +T             + I
Sbjct: 180 YKEKFVLKGHQRGVSAVKFSPDGTMLASCSAD----ATIKIWNTATGTLVHTFEGHLAGI 235

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVF 318
               +S +G+    S   D+++ ++  D+ +                S ++SP  + +V 
Sbjct: 236 STISWSPDGETIA-SGSDDKSIRLW--DVMTGKPYPNPFVGHHNYVYSIAFSPKGNMLVS 292

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E +++     +   R             +   G LI      G    I +   
Sbjct: 293 GSY---DEAVFIWDVRSARIMRSLPAHSDPVAGVDFVRDGTLIVSCAGDG---LIRIWDS 346

Query: 379 DGSQ-ERLLVEDSNLQAPT--WSPSGRSLI 405
              Q  R LV + N    +  +SP+G+ ++
Sbjct: 347 ASGQCLRTLVHEDNPPVASVKFSPNGKFIL 376



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 57/179 (31%), Gaps = 11/179 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR-AP 250
           ++ + +     + +        +    +SP+ + +A  + D      + L D    +  P
Sbjct: 213 TIKIWNTATGTLVHTFEGHLAGISTISWSPDGETIASGSDDK----SIRLWDVMTGKPYP 268

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                  + + +  FS  G   + S   DEA+ I+ V   +     L           + 
Sbjct: 269 NPFVGHHNYVYSIAFSPKGNMLV-SGSYDEAVFIWDV-RSARIMRSLPAHSDPVAGVDFV 326

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            D + IV  +   G   + +  S      R +  +         +SP G  I      G
Sbjct: 327 RDGTLIVSCA---GDGLIRIWDSASGQCLRTLVHEDNPPVASVKFSPNGKFILAWSLDG 382



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 43/134 (32%), Gaps = 14/134 (10%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD + +   S       + +  +         +   A      WSP G+ IA      
Sbjct: 198 FSPDGTMLASCS---ADATIKIWNTATGTLVHTFEGHLAGISTISWSPDGETIASGSDDK 254

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 VM   G          +    +  +SP G  L+      G     ++  D+  R
Sbjct: 255 SIRLWDVM--TGKPYPNPFVGHHNYVYSIAFSPKGNMLV-----SGSYDEAVFIWDV--R 305

Query: 427 NETLINTPAYASDP 440
           +  ++ +    SDP
Sbjct: 306 SARIMRSLPAHSDP 319



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 54/167 (32%), Gaps = 28/167 (16%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    RLWDV   K          P     + H   + +Y      KG        
Sbjct: 248 ASGSDDKSIRLWDVMTGK----------PYPNPFVGHH--NYVYSIAFSPKG-------- 287

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
               +VSG    ++ + D   A I    P+    +    F  +   +     D      +
Sbjct: 288 --NMLVSGSYDEAVFIWDVRSARIMRSLPAHSDPVAGVDFVRDGTLIVSCAGDG----LI 341

Query: 240 YLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIY 285
            + D+   +  + + +  +  + + +FS NGK  L +   D  + ++
Sbjct: 342 RIWDSASGQCLRTLVHEDNPPVASVKFSPNGKFIL-AWSLDGCVRLW 387


>gi|296202255|ref|XP_002748316.1| PREDICTED: WD repeat and SOCS box-containing protein 1 [Callithrix
           jacchus]
          Length = 421

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC---SVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 268 GALLATASYDT---RVYIWDPHNGD--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 322

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 323 GLHIA---SLADDKMVRFWRIDED 343



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 80/259 (30%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++           R +  T + D               ++ VS S   
Sbjct: 151 RIKIWDVYTGKLLL--NLVDHTEVVRDL--TFAPD-------------GSLILVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L +   
Sbjct: 194 TL---RVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSMLCSV----GASKAVFLWNMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + I+  D  +               
Sbjct: 246 YTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFPPPT 302

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   I   +D +   + + +  +     +++          
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHIASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 357

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 358 AFSTDGSVLAAGTHDGSVY 376



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L +   +    +++PD S I+  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K + +  +   +   +SP   ++     S   F +  M K     +L     
Sbjct: 200 LKDDGNMMKVL-RGHQNWVYSCAFSPDSSMLCSVGASKAVF-LWNMDKYTMIRKLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 258 DVVACDFSPDGALLATASY 276


>gi|86141251|ref|ZP_01059797.1| hypothetical protein MED217_04517 [Leeuwenhoekiella blandensis
           MED217]
 gi|85831810|gb|EAQ50265.1| hypothetical protein MED217_04517 [Leeuwenhoekiella blandensis
           MED217]
          Length = 497

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 91/242 (37%), Gaps = 28/242 (11%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A+      +   V     +      ++ +       PR ++   +            I++
Sbjct: 213 AFHFARVINGNSVIFSSDQNGTDVVQLTHSSHNSFRPRKNTQAGKVAFLRTVGGDTHIFT 272

Query: 287 VDLQSNATERLTNTLFIN------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           ++L   AT ++T  + +N      I+ +++ + S+I + +     ++LY +  +GS ++ 
Sbjct: 273 MNLDGTATRQITAAIPVNGFRLSAINFAWAQNGSKIYYPNF----DKLYSINPDGSGREL 328

Query: 341 ISQDKEASYFDPVWSPQ-GDLIAFTKFS---GEKFAIGVMKKD-GSQERLLV--EDSNLQ 393
           + Q    S    V +    D I   K +   G    I  +    G++E +++  ED    
Sbjct: 329 LYQTTNGSLISEVATTDLNDNIIVLKTNNTLGYDTRIFTVSLSAGTEETIILENEDGASG 388

Query: 394 APTWSPSGRSLIFSRKKDGDTG-------SKLYSIDLNGRNETLINTPAYAS----DPQW 442
               S +   +I++R   G          S+L+  DLN   ET I T         + +W
Sbjct: 389 GIDLSANADEVIYTRDISGSENSSYRIFQSRLFKYDLNSSTETQIQTDVDQGENDLEARW 448

Query: 443 VG 444
             
Sbjct: 449 SP 450


>gi|21228830|ref|NP_634752.1| hypothetical protein MM_2728 [Methanosarcina mazei Go1]
 gi|20907352|gb|AAM32424.1| hypothetical protein MM_2728 [Methanosarcina mazei Go1]
          Length = 448

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 76/200 (38%), Gaps = 23/200 (11%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ +K AY T    +I+ V   +T    +   +GNF S +     S +GK+  ++    +
Sbjct: 136 PDGKK-AYVTSFSNNIVSVIDTETDRVISTVNVGNFPSGV---AVSPDGKKVYVANSGGD 191

Query: 281 AMD----IYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESD--REGKEQLYVMQS 333
           + +    +  +D  +NA     +T   +I   +SPD ++  V  S+  R+    + V+ +
Sbjct: 192 STNFTGTVSVIDTATNAVTATIHTGNNSIGVVFSPDGTRAYVMNSNIYRDSTATISVIDT 251

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI----GVMKKDGSQERLLV-- 387
             ++                 SP G  +  +       ++     ++    ++    V  
Sbjct: 252 TTNEVTATVPVGSYPRGV-AVSPDGKKVYVSIQFPGADSLTGAVDIIDTTTNEVTATVPV 310

Query: 388 --EDSNLQAPTWSPSGRSLI 405
                 ++    +P G  ++
Sbjct: 311 GKAPGGIEV---TPDGTKVL 327



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 84/241 (34%), Gaps = 34/241 (14%)

Query: 194 CVMDRDGANIRYL------TPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDT 244
            + + D  NI  +        S   +   P     SP+ +KV Y      + + V     
Sbjct: 58  YITNYDSNNISVIDIAINKVTSTVDVGDHPAGVAVSPDGKKV-YVVNSGSNTVSVIDTSK 116

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                  +IG +   I+    + +GK+A ++           V +    T+R+ +T+ + 
Sbjct: 117 NKVIDTVKIGTYPQEIV---VNPDGKKAYVTS-----FSNNIVSVIDTETDRVISTVNVG 168

Query: 305 ISAS---YSPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
              S    SPD  + V+ ++  G        + V+ +  +     +     +    V+SP
Sbjct: 169 NFPSGVAVSPDGKK-VYVANSGGDSTNFTGTVSVIDTATNAVTA-TIHTGNNSIGVVFSP 226

Query: 357 QGDLIAFTK----FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD 411
            G   A+      +      I V+    ++    V   S  +    SP G+ +  S +  
Sbjct: 227 DGTR-AYVMNSNIYRDSTATISVIDTTTNEVTATVPVGSYPRGVAVSPDGKKVYVSIQFP 285

Query: 412 G 412
           G
Sbjct: 286 G 286



 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 83/246 (33%), Gaps = 41/246 (16%)

Query: 115 RVIKEGKDRLRVE-----FRLWDVKDRKQIIG-------KKFFSSPASWRKIAHTISDDI 162
            V  +GK    V        + D    K I         ++   +P   +    + S++I
Sbjct: 91  AVSPDGKKVYVVNSGSNTVSVIDTSKNKVIDTVKIGTYPQEIVVNPDGKKAYVTSFSNNI 150

Query: 163 YQSI---------TGEKGDF--------NSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
              I         T   G+F        + + ++V+ S            +     N   
Sbjct: 151 VSVIDTETDRVISTVNVGNFPSGVAVSPDGKKVYVANSGGDSTNFTGTVSVIDTATNAVT 210

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            T           FSP+  + AY    +   +    + ++DT  +     +    S    
Sbjct: 211 ATIHTGNNSIGVVFSPDGTR-AYVMNSNIYRDSTATISVIDTTTNEVTATV-PVGSYPRG 268

Query: 263 PRFSSNGKRALISVQKDEAMDI-YSVDLQSNATERLTNTLFINISA---SYSPDSSQIV- 317
              S +GK+  +S+Q   A  +  +VD+    T  +T T+ +  +      +PD ++++ 
Sbjct: 269 VAVSPDGKKVYVSIQFPGADSLTGAVDIIDTTTNEVTATVPVGKAPGGIEVTPDGTKVLV 328

Query: 318 --FESD 321
             + SD
Sbjct: 329 VNYASD 334


>gi|260857899|ref|YP_003231790.1| hypothetical protein ECO26_4893 [Escherichia coli O26:H11 str.
           11368]
 gi|260870420|ref|YP_003236822.1| hypothetical protein ECO111_4516 [Escherichia coli O111:H- str.
           11128]
 gi|257756548|dbj|BAI28050.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
 gi|257766776|dbj|BAI38271.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
 gi|323155365|gb|EFZ41548.1| hypothetical protein ECEPECA14_2786 [Escherichia coli EPECa14]
 gi|323177701|gb|EFZ63285.1| hypothetical protein ECOK1180_3279 [Escherichia coli 1180]
          Length = 404

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 370 NHANPPSADAEVFSPDGQWLAWME------GGQLWITETD 403



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAEVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +    D 
Sbjct: 298 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 352

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 353 RIACAHAQSGEVEYLTENHANPPSAD-AEVFSPDGQWLAW 391


>gi|262195497|ref|YP_003266706.1| hypothetical protein Hoch_2270 [Haliangium ochraceum DSM 14365]
 gi|262078844|gb|ACY14813.1| hypothetical protein Hoch_2270 [Haliangium ochraceum DSM 14365]
          Length = 1010

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 75/193 (38%), Gaps = 6/193 (3%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +G + +++ +++ D    R      D        S +     ++  D + +    L  
Sbjct: 383 VDAGSVYDTVRLVEYDRQRDRLRVVHDDLGGVGGAISGDGGSFYFSRADGDRMHLAELDL 442

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIYSVDLQSN-ATERLTNTL 301
                  +   + RS  L PR S +G   ++S+  + E   +   DL +      +    
Sbjct: 443 ASGSIRDRVTADARSYYLKPRPSPDGSALVVSLFTEAEGFTVRVYDLATGDEITTVPTAG 502

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                AS+  D  ++V  ++ +G+ Q++V +      +R+S   +A Y       +GD +
Sbjct: 503 ARAFDASFV-DGERLVLLAEHQGRFQVFVHRLGSGVIQRVS---DAPYLAFAPRARGDSV 558

Query: 362 AFTKFSGEKFAIG 374
            F   +G  + + 
Sbjct: 559 RFLSRAGWGWELA 571



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 76/217 (35%), Gaps = 14/217 (6%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMIL 261
            R L+     ++    F+ + +++ +A  D   +   V L++    R   R+ +     +
Sbjct: 355 PRMLSSGSPSLVSGMSFTADSKRLYFAVVDAGSVYDTVRLVEYDRQRDRLRVVHDDLGGV 414

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLT-NTLFINISASYSPDSSQIV-- 317
               S +G     S    + M +  +DL S +   R+T +     +    SPD S +V  
Sbjct: 415 GGAISGDGGSFYFSRADGDRMHLAELDLASGSIRDRVTADARSYYLKPRPSPDGSALVVS 474

Query: 318 -FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            F         + V      D+        A  FD  +   G+ +        +F + V 
Sbjct: 475 LFT--EAEGFTVRVYDLATGDEITTVPTAGARAFDASFV-DGERLVLLAEHQGRFQVFVH 531

Query: 377 KKDGSQERLLVEDSNLQAPTWSP--SGRSLIFSRKKD 411
           +      + + +   L    ++P   G S+ F  +  
Sbjct: 532 RLGSGVIQRVSDAPYL---AFAPRARGDSVRFLSRAG 565



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 55/167 (32%), Gaps = 3/167 (1%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           ++  + G  G  +        S   G   +   +    G+    +T        +PR SP
Sbjct: 407 VHDDLGGVGGAISGDGGSFYFSRADGDRMHLAELDLASGSIRDRVTADARSYYLKPRPSP 466

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   +  + + + +   V + D         +    +      F  +G+R ++  +    
Sbjct: 467 DGSALVVSLFTEAEGFTVRVYDLATGDEITTVPTAGARAFDASF-VDGERLVLLAEHQGR 525

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
             ++   L S   +R+++  ++  +         + F S      +L
Sbjct: 526 FQVFVHRLGSGVIQRVSDAPYLAFAPR--ARGDSVRFLSRAGWGWEL 570


>gi|307207347|gb|EFN85097.1| Protein will die slowly [Harpegnathos saltator]
          Length = 334

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 82/224 (36%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++Y      + +   +FSPN + +A +  D      + +  +   +  K I   +  I
Sbjct: 35  YTLKYTLAGHTKAVSSVKFSPNGEWLASSAADK----LIKIWGSYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + I+ +       + L          +++P S+ IV  S
Sbjct: 91  SDVAWSSD-SRLLVSGSDDKTLKIWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 148

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 149 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 203

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 204 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|301026671|ref|ZP_07190085.1| conserved hypothetical protein [Escherichia coli MS 69-1]
 gi|300395393|gb|EFJ78931.1| conserved hypothetical protein [Escherichia coli MS 69-1]
          Length = 416

 Score = 62.3 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 403


>gi|260591055|ref|ZP_05856513.1| OmpA family protein [Prevotella veroralis F0319]
 gi|260536920|gb|EEX19537.1| OmpA family protein [Prevotella veroralis F0319]
          Length = 695

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 64/186 (34%), Gaps = 27/186 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQL 328
             IS + D+       D+ S       NT     + ++S D  ++      +D       
Sbjct: 213 IFISEKDDKGKWSVPQDIASGL-----NTDADEGTPAFSVDGREMYITQCLTDPTYPRYA 267

Query: 329 YVMQSNGSDQK-------RISQDKEASYFDPVWSPQGDLIAFTKF---SGEKFAIGVMKK 378
            +  SN +D          IS+D  +S+  P  SP G+ + FT           I  ++ 
Sbjct: 268 QIAVSNRTDAAWSKATKLEISRDSLSSFAHPALSPDGNWLYFTSDMPGGKGGLDIWRVRL 327

Query: 379 DGSQE-------RLLVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETL 430
            G            +    + + PT+ P+G  L FS     G  G  +Y   +   +   
Sbjct: 328 SGGTTGGVENLGEPINTSGDEEFPTFRPNGD-LYFSSNGHGGMGGLDIYIAKVGDDHHYH 386

Query: 431 INTPAY 436
           +  P Y
Sbjct: 387 LEHPGY 392



 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 54/183 (29%), Gaps = 40/183 (21%)

Query: 299 NTLFINISAS-YSPDSSQIVFESDREGKEQ-------------LYVMQSNGSDQKRISQD 344
           N+   + S   Y     Q+ F S R   +              +++ + +   +  + QD
Sbjct: 170 NSRRQDYSPMLYGDKFDQLYFSSTRNDAQGDDISGITGAKAGDIFISEKDDKGKWSVPQD 229

Query: 345 ------KEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERLLV------ 387
                  +A    P +S  G  +  T+            I V  +  +            
Sbjct: 230 IASGLNTDADEGTPAFSVDGREMYITQCLTDPTYPRYAQIAVSNRTDAAWSKATKLEISR 289

Query: 388 -EDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNE-------TLINTPAYAS 438
              S+   P  SP G  L F+     G  G  ++ + L+G            INT     
Sbjct: 290 DSLSSFAHPALSPDGNWLYFTSDMPGGKGGLDIWRVRLSGGTTGGVENLGEPINTSGDEE 349

Query: 439 DPQ 441
            P 
Sbjct: 350 FPT 352



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 41/143 (28%), Gaps = 20/143 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRS 258
           ++         P  SP+   + + +        + +   R+               N   
Sbjct: 287 ISRDSLSSFAHPALSPDGNWLYFTSDMPGGKGGLDIWRVRLSGGTTGGVENLGEPINTSG 346

Query: 259 MILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERL------TNTLFINISASY 309
               P F  NG     S         +DIY   +  +    L       N+   +   ++
Sbjct: 347 DEEFPTFRPNGD-LYFSSNGHGGMGGLDIYIAKVGDDHHYHLEHPGYPLNSQGDDFGMTF 405

Query: 310 SPDSSQIVFESDRE---GKEQLY 329
               ++  F S+R    G + +Y
Sbjct: 406 EGRYNRGFFSSNRNDGRGWDHIY 428


>gi|114048910|ref|YP_739460.1| peptidase S9 prolyl oligopeptidase [Shewanella sp. MR-7]
 gi|113890352|gb|ABI44403.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sp. MR-7]
          Length = 826

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 81/226 (35%), Gaps = 13/226 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++  +A    ++          T+  R  + + ++     A ++  +  +  + V+  + 
Sbjct: 337 DEDVLAKVKSENAKAKGESYQSTKAPRKIQLMQDWGWTQSAIQWHESEDKLAVMVEATDN 396

Query: 282 MDIYSVDLQSNATERLTNTLFINISAS--------YSPDSSQIVFESDREGKEQLYVMQS 333
            D +   +  +  + +T     + +          + P +  + + S+  G  QLY+ ++
Sbjct: 397 KDRWIASVDLSKGKFITEHRLHDDAWVNYDYNQFGWLPGTDTLYYLSEETGYSQLYI-KA 455

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSN 391
                + ++Q K     D   SP  + I +         + +  +     +   L +   
Sbjct: 456 RSEKPRALTQGKFV-VSDITLSPDANYIYYKANQSHPGIYNVHRVNIASGKNEQLTQWDG 514

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               + SP G  L+ +  +     ++LY   + G  + L +  + A
Sbjct: 515 NLDYSLSPDGTKLLLNASRR-TAPNELYIQPIGGELKQLTSYTSDA 559



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 60/173 (34%), Gaps = 13/173 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSR-------DQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
               +   D +  +++T  R       +    +  + P    + Y + +        L  
Sbjct: 397 KDRWIASVDLSKGKFITEHRLHDDAWVNYDYNQFGWLPGTDTLYYLSEETG---YSQLYI 453

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTL 301
                 P+ +   + ++     S +         +      +++ V++ S   E+LT   
Sbjct: 454 KARSEKPRALTQGKFVVSDITLSPDANYIYYKANQSHPGIYNVHRVNIASGKNEQLTQWD 513

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             N+  S SPD ++++  + R        +Q  G + K+++     ++    W
Sbjct: 514 G-NLDYSLSPDGTKLLLNASRRTAPNELYIQPIGGELKQLTSYTSDAFKQYPW 565


>gi|157163168|ref|YP_001460486.1| hypothetical protein EcHS_A3901 [Escherichia coli HS]
 gi|157068848|gb|ABV08103.1| conserved hypothetical protein [Escherichia coli HS]
          Length = 404

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 403



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 305 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 363 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 391


>gi|291566096|dbj|BAI88368.1| serine/threonine protein kinase with WD-40 repeats [Arthrospira
           platensis NIES-39]
          Length = 594

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 86/227 (37%), Gaps = 22/227 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A  ++D    +R++  DT          +    ILA  FS +GK       
Sbjct: 313 AFSPDGNILAGGSFD--RTIRLWRPDTGEWMMSLLGSSQP--ILAIAFSRDGKLLA-GGS 367

Query: 278 KDEAMDIYSVDLQSNATE-RLTNTLFINISAS--YSPDSSQIVFESDREGKEQLYVMQSN 334
            D  + I+  +L+++     +       +S S  + P    I   SD +G  +++ + + 
Sbjct: 368 GDGHIHIW--NLETSEEVIAIAAHETDRVSMSITFGPQGDIIASGSD-DGTVKIWKLSTC 424

Query: 335 GSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                ++  + +          SP G L+A    S     +  +     Q +LL  + ++
Sbjct: 425 -----QLFHNLQHLRGINGIAISPNGKLLAAAS-SDNSIHLWEVNSGEHQGQLLGHERDI 478

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            A  +S  G+ L  +     D   KL+ ++     +TL     +   
Sbjct: 479 NAIAFSRDGQILASASS---DNTIKLWDLETQQLRQTLTGHEDWVRS 522



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 78/241 (32%), Gaps = 17/241 (7%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             SG     +  ++     I       D++     F P    +A  + D      V +  
Sbjct: 365 GGSGDGHIHIWNLETSEEVIAIAAHETDRVSMSITFGPQGDIIASGSDDG----TVKIWK 420

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +    + + R +      S NGK    +   D ++ ++ V+   +  + L +   I
Sbjct: 421 LSTCQLFHNLQHLRGINGI-AISPNGKLLA-AASSDNSIHLWEVNSGEHQGQLLGHERDI 478

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW--SPQGD-- 359
           N  A +S D   +   S       + +        ++     E       +  SP  D  
Sbjct: 479 NAIA-FSRDGQILASASS---DNTIKLWDLETQQLRQTLTGHEDWVRSVAFIQSPDQDQK 534

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +  +  +     I  + +  + + L+    ++ A   SP+ R++        D   K++
Sbjct: 535 FLLVSGSADRTIKIWDLDQGSAIDTLVGHTKDINAIAISPNHRTIA---SGSSDNTIKIW 591

Query: 420 S 420
            
Sbjct: 592 R 592


>gi|161520093|ref|YP_001583520.1| coagulation factor 5/8 type domain-containing protein [Burkholderia
           multivorans ATCC 17616]
 gi|189353728|ref|YP_001949355.1| putative periplasmic component of the Tol biopolymer transport
           system [Burkholderia multivorans ATCC 17616]
 gi|221209369|ref|ZP_03582350.1| coagulation factor 5/8 type domain protein [Burkholderia
           multivorans CGD1]
 gi|160344143|gb|ABX17228.1| coagulation factor 5/8 type domain protein [Burkholderia
           multivorans ATCC 17616]
 gi|189337750|dbj|BAG46819.1| putative periplasmic component of the Tol biopolymer transport
           system [Burkholderia multivorans ATCC 17616]
 gi|221170057|gb|EEE02523.1| coagulation factor 5/8 type domain protein [Burkholderia
           multivorans CGD1]
          Length = 471

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 73/213 (34%), Gaps = 14/213 (6%)

Query: 225 KVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDE 280
           K+ Y +Y    D      +         ++      I  P    FS +GK       ++ 
Sbjct: 47  KLVYHSYVKYGDGTSQLFLYDFSAHTLTQLSKSTWGITDPMNGVFSPDGKWLAFMGIRNG 106

Query: 281 AMDIYSVDLQSNATER-LTNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQSNG-- 335
           A +++ + L +      +T++     N    +SPD   +VF+ + + K+      S G  
Sbjct: 107 AWNVFMLQLGAGTPPVDMTHSTGATRNEDPKFSPDGKTLVFKQNGDVKQGTLSFTSAGPV 166

Query: 336 -SDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            +    ++     + Y  P  SP    + +   +G    +                + LQ
Sbjct: 167 FTSVVSLTNAPSGAEYSMPYLSPDATAVYYATGAGANMGLMKRTIATGATATFDHPAGLQ 226

Query: 394 --APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              P     G  + ++R KD     ++Y+   +
Sbjct: 227 TYYPMVRADG-MVFYARWKDSGGLDQIYAKSAD 258



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 72/227 (31%), Gaps = 12/227 (5%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI-LFEPRFSPNQQKVAY- 228
           G F+    +++   +     N   +    G     +T S       +P+FSP+ + + + 
Sbjct: 89  GVFSPDGKWLAFMGIRNGAWNVFMLQLGAGTPPVDMTHSTGATRNEDPKFSPDGKTLVFK 148

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQKDEAMDIYS 286
              D +     +     +  +   + N  S      P  S +      +      M +  
Sbjct: 149 QNGDVKQGTLSFTSAGPVFTSVVSLTNAPSGAEYSMPYLSPDATAVYYATGAGANMGLMK 208

Query: 287 VDLQSNATERLTNTLFINI-SASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRIS 342
             + + AT    +   +         D   +VF +   D  G +Q+Y   ++ S      
Sbjct: 209 RTIATGATATFDHPAGLQTYYPMVRADG--MVFYARWKDSGGLDQIYAKSADPSSTPSAL 266

Query: 343 QDKEASYFDPVWSP-QG-DLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
              +    +   +P  G + + F+  +   + + V      +   L 
Sbjct: 267 SINDCVSNNSDPAPVNGTNYLFFSSTTAGGYQLYVGDVTTGKRWSLS 313


>gi|160890005|ref|ZP_02071008.1| hypothetical protein BACUNI_02439 [Bacteroides uniformis ATCC 8492]
 gi|156860393|gb|EDO53824.1| hypothetical protein BACUNI_02439 [Bacteroides uniformis ATCC 8492]
          Length = 855

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 56/294 (19%), Positives = 99/294 (33%), Gaps = 49/294 (16%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL--------- 237
           G  +N L V D   A +R     ++       +SP +  + Y   D+ + +         
Sbjct: 281 GEEQNDLVVFDP--ATMREEVLLKNVPEGYFSWSPTEDYLIYMLTDEGEKVSGPLKRLLH 338

Query: 238 ----------RVYLMDTRI-DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM---- 282
                     R YLM   +     +R+      +     S +GK+ L S  K +      
Sbjct: 339 PDDRIPNSRDRYYLMKYDVATGLSERLTYGSHNVYLNDISPDGKKLLCSTSKPDITRCPF 398

Query: 283 ---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKE-------- 326
               ++ +DL +   + L        SASYSPD  Q++           GK         
Sbjct: 399 SLSSLFEIDLTTLQADTLVAWDAYLGSASYSPDGKQLLVTGSPSAFGGIGKNCGEHPIAN 458

Query: 327 ----QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKFAIGV-MKKDG 380
               Q ++M       + I++D   +     W+   G  I F    G+   I   + K G
Sbjct: 459 DFDTQAFIMDLATKKVQAITRDFNPTVSLVQWNRVDGC-IYFDTTDGDCRHIYRYVPKTG 517

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             E L +E+  + + T +     +         +    Y+ D   +  TL+  P
Sbjct: 518 GFEMLPLEEDVITSFTLANDNPVVAAYVGGGNTSTGVAYTYDTKKKVSTLLANP 571



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 58/380 (15%), Positives = 109/380 (28%), Gaps = 68/380 (17%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
              N+ S   F+  +       +    +SL         +  + +    +  +L    D 
Sbjct: 117 GKLNVYSPARFEVFVNGESKQVKETAEDSLSQVRPTAVSLRMDPEADYEIVIKLLSSADD 176

Query: 137 K-QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           K Q + K  F     +  +A  ++ D+ +  +    +F SR   VS S  +G    +   
Sbjct: 177 KMQPMLKCEFEKEKDFADVACRMAPDMKRRFSLFNTNFGSRASRVSLS-PNGKYLLTRYS 235

Query: 196 MDRDGANIRY---LTPSRDQILFEPR------FSPNQQKVAYATYDDEDILRVYLMDTRI 246
            + D    R    LT  +   +  P       + PN  K+ Y    +E    V + D   
Sbjct: 236 DNYDVKRSRTRCELTEVKTGRVILPNANEKMNWMPNSNKLYYTVMGEEQNDLV-VFDPAT 294

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----------------------AMDI 284
            R    + N      +  +S      +  +  +                          +
Sbjct: 295 MREEVLLKNVPEGYFS--WSPTEDYLIYMLTDEGEKVSGPLKRLLHPDDRIPNSRDRYYL 352

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
              D+ +  +ERLT           SPD  +++  +    K  +     + S    I   
Sbjct: 353 MKYDVATGLSERLTYGSHNVYLNDISPDGKKLLCSTS---KPDITRCPFSLSSLFEIDLT 409

Query: 345 KEASYFDPVW---------SPQGDLIAFTKFSG---------EKFAIG--------VMKK 378
              +     W         SP G  +  T              +  I         +M  
Sbjct: 410 TLQADTLVAWDAYLGSASYSPDGKQLLVTGSPSAFGGIGKNCGEHPIANDFDTQAFIMDL 469

Query: 379 DGSQERLLVEDSNLQAPTWS 398
              + + +  D N   PT S
Sbjct: 470 ATKKVQAITRDFN---PTVS 486


>gi|194768847|ref|XP_001966523.1| GF22217 [Drosophila ananassae]
 gi|190617287|gb|EDV32811.1| GF22217 [Drosophila ananassae]
          Length = 361

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 83/224 (37%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 62  YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 117

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + ++ +     + + L          +++P S+ IV  S
Sbjct: 118 SDVAWSSD-SRLLVSGSDDKTLKVWELS-TGKSLKTLKGHSNYVFCCNFNPQSNLIVSGS 175

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 176 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 230

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 231 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 271


>gi|298248679|ref|ZP_06972484.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297551338|gb|EFH85204.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 498

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 104/331 (31%), Gaps = 55/331 (16%)

Query: 113 TGRVIKEGKDRLRVEFR--LWDVKDRKQI--------IGKKFFSSPASWRKIAHTISDDI 162
              V K        +FR  +WD+  R+QI        +G  F+ S  +    +  +  DI
Sbjct: 158 VAEVGKSNSGGSFDQFRAVVWDLPSRQQIWKSPPLGHLGNTFYPSALAPSGASFALCQDI 217

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
             S+  +              +        +      G++      + D  +    +SP+
Sbjct: 218 SDSLNYDSSTNT------IVQIWDIQKNRLIKDWKVQGSST-VPGQTGDFAVTTLAWSPD 270

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              +A         ++V+ +          I N R + +  ++S +G    +        
Sbjct: 271 NTLLA--VICTGGFVQVWDVTEGSRLWTSPISNGRGVSI--QWSPDGTTFALWT---FNE 323

Query: 283 DIYSVDLQSNATERLTNTLFINIS-----------------ASYSPDSSQIVFESDREGK 325
            +  +D  +   +RL  T  +N S                   +S D +++    D +  
Sbjct: 324 PMEMLDAHTG--KRLFQTAALNFSQYDVDGLSRGITQTSESLVWSSDGTRLAMLIDEQST 381

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + V  +    +    Q  E       WSP G  +A    +G   A   +  +GS  + 
Sbjct: 382 SVVQVCDARTGQRLFTCQHVEGRLTGCSWSPNGRYLAAGNIAGGSSADETL-GEGSTIQF 440

Query: 386 LVED-----SNLQAP------TWSPSGRSLI 405
                     + QAP       WSP  R L 
Sbjct: 441 WDAQNGKALFSYQAPRASGRLAWSPDSRFLA 471


>gi|307154049|ref|YP_003889433.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306984277|gb|ADN16158.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 826

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 82/236 (34%), Gaps = 16/236 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  +  +      +          +     SP+QQ +A  +    +   + L    
Sbjct: 562 GDRSILEVWTLSASTPILSQTLTHHCGQVLACSLSPDQQFLA-TSDHTNNRSYIKLWHLP 620

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
            +   K +   +  I A   + +G+  +        + ++  +L+S    + L       
Sbjct: 621 SETLEKTLFGHKKEIYALLITPDGQTLI---SASHKIKLW--NLKSGEPFQTLFGHREWV 675

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S + SP+   +V  S+      L V +    D        +A+      SP G   A +
Sbjct: 676 TSLAVSPNGQILVSGSE---DNTLRVWKLQTGDLFCTLSGHQAAVKTVAISPDGKF-ALS 731

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             S E   +  ++ +G   + L + ++ +   T+SP G+   F    + DT  K++
Sbjct: 732 GSSDETINLWDIR-NGKLVQTLKDHTDAVNTITFSPDGQY--FVSGSE-DTTLKIW 783



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 5/101 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG   N+L V      ++          +     SP+ +     + D+     + L D 
Sbjct: 688 VSGSEDNTLRVWKLQTGDLFCTLSGHQAAVKTVAISPDGKFALSGSSDE----TINLWDI 743

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           R  +  + + +    +    FS +G+   +S  +D  + I+
Sbjct: 744 RNGKLVQTLKDHTDAVNTITFSPDGQY-FVSGSEDTTLKIW 783



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 62/175 (35%), Gaps = 11/175 (6%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSP 311
           I      +++   S++GK   I++     ++++++   +    + LT+     ++ S SP
Sbjct: 539 INTTSGGVVSLILSADGKEL-INLGDRSILEVWTLSASTPILSQTLTHHCGQVLACSLSP 597

Query: 312 DSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           D   +   SD       + +        ++     +   +  + +P G  +         
Sbjct: 598 DQQFLA-TSDHTNNRSYIKLWHLPSETLEKTLFGHKKEIYALLITPDGQTLISAS----- 651

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             I +      +    +        +   SP+G+ L+   + +     KL + DL
Sbjct: 652 HKIKLWNLKSGEPFQTLFGHREWVTSLAVSPNGQILVSGSEDNTLRVWKLQTGDL 706


>gi|327313465|ref|YP_004328902.1| OmpA family protein [Prevotella denticola F0289]
 gi|326946064|gb|AEA21949.1| OmpA family protein [Prevotella denticola F0289]
          Length = 697

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 80/258 (31%), Gaps = 43/258 (16%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG-KRALISVQKD 279
           P++Q +A                ++       + N R    +P    +  ++   +  ++
Sbjct: 136 PDEQTIARGMQAASTAAAAKAHGSKYIVKRMDVFNSRRQDYSPMLYGDKYEQLYFTSTRN 195

Query: 280 ---------------EAMDIYSVDLQS--NATERLT---NTLFINISASYSPDSSQIVFE 319
                            + +   D +      + +    NT     + ++S D  ++   
Sbjct: 196 EAKGDEPSGITGVKAGDIFLSEKDEKGKWGTPKVIVSGLNTEADEGTPAFSADGREMYIT 255

Query: 320 ---SDREGKEQLYVMQSNGSDQK-------RISQDKEASYFDPVWSPQGDLIAFTKF--- 366
              +D        +  SN SD          IS+D  +S+  P  SP G+ + FT     
Sbjct: 256 QCLTDPSYPRYAQIAVSNRSDAAWGKATKLEISRDTLSSFAHPAVSPDGNWLYFTSDMPG 315

Query: 367 SGEKFAIGVMKKDGSQER-------LLVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKL 418
                 I  ++  G            +    + + PT+ P+G  L FS     G  G  +
Sbjct: 316 GKGGLDIWRVRLTGGTTGGVENLGDPVNTPGDEEFPTFRPNGD-LYFSSNGHGGLGGLDI 374

Query: 419 YSIDLNGRNETLINTPAY 436
           Y       +   +  P Y
Sbjct: 375 YIAKAGSDHRYHLEHPGY 392



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 41/143 (28%), Gaps = 20/143 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRS 258
           ++         P  SP+   + + +        + +   R+               N   
Sbjct: 287 ISRDTLSSFAHPAVSPDGNWLYFTSDMPGGKGGLDIWRVRLTGGTTGGVENLGDPVNTPG 346

Query: 259 MILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERL------TNTLFINISASY 309
               P F  NG     S         +DIY     S+    L       N+   +   ++
Sbjct: 347 DEEFPTFRPNGD-LYFSSNGHGGLGGLDIYIAKAGSDHRYHLEHPGYPLNSQGDDFGMTF 405

Query: 310 SPDSSQIVFESDRE---GKEQLY 329
               ++  F S+R    G + +Y
Sbjct: 406 EGLHNRGFFSSNRGDGRGWDHIY 428


>gi|320158696|ref|YP_004191074.1| WD40 repeat-containing protein [Vibrio vulnificus MO6-24/O]
 gi|319934008|gb|ADV88871.1| WD40 repeat [Vibrio vulnificus MO6-24/O]
          Length = 944

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 8/141 (5%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEAS-YFDPVWSPQGDLI-A 362
           SA + PD  + +      G  +L++M +   +  ++I Q            S     I A
Sbjct: 404 SAKWLPDGQRYLATRKVNGLSELWLMDAQQPESGQQIWQGTIGDVLGGFAVSHDARFIVA 463

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             K S E + +        Q   L +   ++ +P ++P G  ++FS   DG     +YS+
Sbjct: 464 SVKRSSEGWNLEKFDLAALQWTPLTQSRAVENSPAFTPDGE-VLFSADYDG--VFNIYSL 520

Query: 422 D-LNGRNETLINTPAYASDPQ 441
           D ++G  + L +    A  PQ
Sbjct: 521 DIVSGEIKQLTSEVGGAFTPQ 541



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 68/170 (40%), Gaps = 16/170 (9%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIK----NSLCVMDRDG--ANIRYLTPSRDQI 213
           DD +Q++T EK  F S              K    + L +MD     +  +    +   +
Sbjct: 390 DDRWQALT-EKQRFRSAKWLPDGQRYLATRKVNGLSELWLMDAQQPESGQQIWQGTIGDV 448

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           L     S + + +  +     +   +   D    +    +   R++  +P F+ +G   L
Sbjct: 449 LGGFAVSHDARFIVASVKRSSEGWNLEKFDLAALQ-WTPLTQSRAVENSPAFTPDG-EVL 506

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ---IVFES 320
            S   D   +IYS+D+ S   ++LT+     +  +++P + +    V++S
Sbjct: 507 FSADYDGVFNIYSLDIVSGEIKQLTS----EVGGAFTPQTRRNSGFVYQS 552


>gi|253987706|ref|YP_003039062.1| hypothetical protein PAU_00223 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779156|emb|CAQ82316.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 429

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 52/139 (37%), Gaps = 18/139 (12%)

Query: 295 ERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQD 344
            RLT T       +  +   +   SPD  QI F   D     QL+ +  NG   ++I++ 
Sbjct: 290 RRLTFTNHKRWPGVVNNPRHWLRASPDGEQIGFLMKDDNSIVQLWTISPNGGKPRQITKG 349

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPS 400
                    W   G  + F   +    ++ +     SQ + L + +      +A   SP 
Sbjct: 350 SYGIQSAFSWDRSGQYVVFICDN----SVMLCDVQNSQMQRLTKRTEKAPAAEAVVISPD 405

Query: 401 GRSLIFSRKKDGDTGSKLY 419
            R + F R+ DG T   L 
Sbjct: 406 SRHVAFMREVDGYTQIFLV 424



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 52/132 (39%), Gaps = 12/132 (9%)

Query: 256 FRSMILAPR-F---SSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTL-FINISASY 309
           +  ++  PR +   S +G++    ++ D ++  ++++        ++T     I  + S+
Sbjct: 300 WPGVVNNPRHWLRASPDGEQIGFLMKDDNSIVQLWTISPNGGKPRQITKGSYGIQSAFSW 359

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFS 367
                 +VF  D      + +     S  +R+++  E   +    V SP    +AF +  
Sbjct: 360 DRSGQYVVFICDNS----VMLCDVQNSQMQRLTKRTEKAPAAEAVVISPDSRHVAFMREV 415

Query: 368 GEKFAIGVMKKD 379
                I +++  
Sbjct: 416 DGYTQIFLVETG 427



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 34/162 (20%)

Query: 176 RILFVSESVVSGIIKNSLC--VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           R+ F +     G++ N         DG  I +L    + I+     SPN  K        
Sbjct: 291 RLTFTNHKRWPGVVNNPRHWLRASPDGEQIGFLMKDDNSIVQLWTISPNGGK-------- 342

Query: 234 EDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                           P++I      +  A  +  +G+  +          +   D+Q++
Sbjct: 343 ----------------PRQITKGSYGIQSAFSWDRSGQYVVFICDNS----VMLCDVQNS 382

Query: 293 ATERLT--NTLFINISA-SYSPDSSQIVFESDREGKEQLYVM 331
             +RLT          A   SPDS  + F  + +G  Q++++
Sbjct: 383 QMQRLTKRTEKAPAAEAVVISPDSRHVAFMREVDGYTQIFLV 424


>gi|298250089|ref|ZP_06973893.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297548093|gb|EFH81960.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 688

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 85/276 (30%), Gaps = 60/276 (21%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE--DILRV 239
            + V+   ++ + V D        +       ++   +SP+ + +A     D+      +
Sbjct: 407 PTNVTVSKEHLIHVWDALTGKHPIIYRGHTANIYTLAWSPDGKYIASGGVGDKATSSASL 466

Query: 240 YLMDTRIDRAPKRIGNFRSM---------------------------------------- 259
            + ++   +    + +  S+                                        
Sbjct: 467 QVWESATGKHVASLDSDTSIITQIYWHETNQILAIGGISGQVIYWNPFKNISTIQKFTLE 526

Query: 260 ILAP----RFSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           ++ P      S +GK  L++  K     A  +  ++  S          F      +SP+
Sbjct: 527 VIDPNSTCSVSPDGKYILVNNGKQIIGTAYRLADMNQISQDPTEGGTGSFPEFPYFWSPN 586

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            SQ           Q++    +    +RI S DK   Y    WSP G  IA    SG   
Sbjct: 587 -SQRCISMHWRKPPQIW----DLLTSQRIASFDKVCFYTGHSWSPDGQKIASYGQSG--- 638

Query: 372 AIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
           A+ +      +         S++ +  WSP GR + 
Sbjct: 639 ALFIWNATTGKVLYTYAPHISDIGSTAWSPDGRMIA 674



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 65/218 (29%), Gaps = 21/218 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDD------------EDILRVYLMDTRIDRAPKRI 253
           +   ++  ++   +SP+  ++A A+ D                  +++ D    + P   
Sbjct: 373 IYHKQNASIYALGWSPDGTRIASASSDILPLVDPPTNVTVSKEHLIHVWDALTGKHPIIY 432

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINISASY 309
               + I    +S +GK        D+A    S+             L +   I     +
Sbjct: 433 RGHTANIYTLAWSPDGKYIASGGVGDKATSSASLQVWESATGKHVASLDSDTSIITQIYW 492

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-- 367
              +  +       G+   +    N S  ++ + +          SP G  I        
Sbjct: 493 HETNQILA-IGGISGQVIYWNPFKNISTIQKFTLEVIDPNSTCSVSPDGKYILVNNGKQI 551

Query: 368 -GEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRS 403
            G  + +  M +           S  + P  WSP+ + 
Sbjct: 552 IGTAYRLADMNQISQDPTEGGTGSFPEFPYFWSPNSQR 589


>gi|149184766|ref|ZP_01863084.1| dipeptidyl aminopeptidase [Erythrobacter sp. SD-21]
 gi|148832086|gb|EDL50519.1| dipeptidyl aminopeptidase [Erythrobacter sp. SD-21]
          Length = 771

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 56/303 (18%), Positives = 103/303 (33%), Gaps = 46/303 (15%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           A   +D  + S   EK   +     V  S            +  DG  +  L    D + 
Sbjct: 40  APAYAD--HHSPAQEKAAMDLTFERVFASPSLDGPSPRQAKLSPDGRYLTVLRNREDDLA 97

Query: 215 FEPRFSPN---QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
               ++ +    + +     +     R    D ++ R   R+GN   +I    ++SNGK 
Sbjct: 98  RYDLWAFDRETGEWLMLVDSEKVGSGRELSEDEKMQRERARVGNLLGIISY-EWTSNGKA 156

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L+ +  D    +Y   L      ++T+T    ++ + SP  + I F  DR    QL+V 
Sbjct: 157 ILVPLDGD----LYLASLD-GQVVQVTDTEESELNPALSPHGNYISFVRDR----QLWVG 207

Query: 332 QSNG---------------SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +  G                + + ++Q++ A      WSP    IA  +F      I   
Sbjct: 208 EVMGEAAPITPKEGADIRWGEAEFVAQEEMARIDGYWWSPDESRIAVERFDESGVGIVTR 267

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
              G+    + +                 +      +   +LY +DLNG+N   ++    
Sbjct: 268 AAIGATGTKVFDQR---------------YPVAGSDNAVVELYVMDLNGQNRVKVDL-GD 311

Query: 437 ASD 439
             D
Sbjct: 312 NPD 314



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 78/252 (30%), Gaps = 17/252 (6%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGA 201
           ++ SP   R       +     +T          +F     V+G       L VMD +G 
Sbjct: 243 YWWSPDESRIAVERFDESGVGIVTRAAIGATGTKVFDQRYPVAGSDNAVVELYVMDLNGQ 302

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI- 260
           N   +    +  ++  R   +   +     + E  +   L         + +    + + 
Sbjct: 303 NRVKVDLGDNPDIYLARVDWSGNDLYVTRQNREQTVMDILRVDSATGESQVLFTENAAVE 362

Query: 261 -------LAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISAS-YSP 311
                     ++  NG   +   ++D    +Y +D        +LT+  ++         
Sbjct: 363 DYWINLGSDYKWLDNGN-LVWWSERDGYGHLYLLDEAGKTGWTQLTSGEWVVTKLVGVDQ 421

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTKFSG 368
            + ++ F+  ++G  + +V   + ++   I++  E  Y     S  G    L+       
Sbjct: 422 RAGRVFFQGTKDGVLEQHVYSVDLANPGAITRLTELGYTHSA-SMDGKGQTLLISRSNDD 480

Query: 369 EKFAIGVMKKDG 380
                 +    G
Sbjct: 481 RPPQSYIADATG 492



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 57/182 (31%), Gaps = 36/182 (19%)

Query: 265 FSSNGKRALISVQKDE---AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            S +G+   +   +++     D+++ D ++     L ++  +      S D         
Sbjct: 79  LSPDGRYLTVLRNREDDLARYDLWAFDRETGEWLMLVDSEKVGSGRELSEDEKM------ 132

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                           ++R             W+  G  I           + +   DG 
Sbjct: 133 ---------------QRERARVGNLLGIISYEWTSNGKAILV----PLDGDLYLASLDGQ 173

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             ++   + +   P  SP G  + F R +      +L+  ++ G  E    TP   +D +
Sbjct: 174 VVQVTDTEESELNPALSPHGNYISFVRDR------QLWVGEVMG--EAAPITPKEGADIR 225

Query: 442 WV 443
           W 
Sbjct: 226 WG 227


>gi|17864654|ref|NP_524984.1| will die slowly [Drosophila melanogaster]
 gi|195347974|ref|XP_002040526.1| GM19230 [Drosophila sechellia]
 gi|195564803|ref|XP_002106002.1| GD16610 [Drosophila simulans]
 gi|8928446|sp|Q9V3J8|WDS_DROME RecName: Full=Protein will die slowly
 gi|7243701|gb|AAF43418.1|AF233288_1 WDS [Drosophila melanogaster]
 gi|6946677|emb|CAB72292.1| EG:BACR25B3.7 [Drosophila melanogaster]
 gi|7290331|gb|AAF45791.1| will die slowly [Drosophila melanogaster]
 gi|21392122|gb|AAM48415.1| RE31658p [Drosophila melanogaster]
 gi|164430295|gb|ABY55475.1| wds [Drosophila mauritiana]
 gi|164430297|gb|ABY55476.1| wds [Drosophila mauritiana]
 gi|164430299|gb|ABY55477.1| wds [Drosophila mauritiana]
 gi|164430301|gb|ABY55478.1| wds [Drosophila mauritiana]
 gi|164430303|gb|ABY55479.1| wds [Drosophila mauritiana]
 gi|188504114|gb|ACD56175.1| WDS [Drosophila simulans]
 gi|188504116|gb|ACD56176.1| WDS [Drosophila simulans]
 gi|188504118|gb|ACD56177.1| WDS [Drosophila simulans]
 gi|188504120|gb|ACD56178.1| WDS [Drosophila simulans]
 gi|188504122|gb|ACD56179.1| WDS [Drosophila sechellia]
 gi|188504124|gb|ACD56180.1| WDS [Drosophila sechellia]
 gi|194121954|gb|EDW43997.1| GM19230 [Drosophila sechellia]
 gi|194203368|gb|EDX16944.1| GD16610 [Drosophila simulans]
 gi|220948386|gb|ACL86736.1| wds-PA [synthetic construct]
 gi|220957596|gb|ACL91341.1| wds-PA [synthetic construct]
          Length = 361

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 83/224 (37%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 62  YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 117

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + ++ +     + + L          +++P S+ IV  S
Sbjct: 118 SDVAWSSD-SRLLVSGSDDKTLKVWELS-TGKSLKTLKGHSNYVFCCNFNPQSNLIVSGS 175

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 176 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 230

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 231 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 271


>gi|331655348|ref|ZP_08356347.1| conserved hypothetical protein [Escherichia coli M718]
 gi|331047363|gb|EGI19441.1| conserved hypothetical protein [Escherichia coli M718]
          Length = 416

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 403


>gi|313674933|ref|YP_004052929.1| peptidase s9b dipeptidylpeptidase iv domain protein [Marivirga
           tractuosa DSM 4126]
 gi|312941631|gb|ADR20821.1| peptidase S9B dipeptidylpeptidase IV domain protein [Marivirga
           tractuosa DSM 4126]
          Length = 720

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 62/353 (17%), Positives = 121/353 (34%), Gaps = 89/353 (25%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL---CVMDRDGANIRYLTPSRDQILFE 216
            DIY     EKG F    ++    +  G   ++L    V   D  N + +    D    +
Sbjct: 25  SDIY-----EKGTFRQESVYNVNWMNDGKYYSALDDNKVQKIDVENGKVVETLVDGDKLD 79

Query: 217 P-------RFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           P        FS ++QK+  AT             Y +    D + K + +   M     F
Sbjct: 80  PVLDIKSYSFSKDEQKLLLATDVNYIYRRSFTAQYYVYNLEDESLKPLSDDPQM--FATF 137

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----------------- 308
           S + ++     + +    IY  DLQS  T ++T+   IN + +                 
Sbjct: 138 SPDAQKVAYVFENN----IYIFDLQSGRTTQVTSDGKINENINGGSDWVYEEEFYVTRTF 193

Query: 309 -YSPDSSQIV-FESDREGKEQ-------------------------------LYVMQSNG 335
            +SP+S ++  +  D    ++                               + V     
Sbjct: 194 YWSPNSKKLAYYTMDESHVKEYTLQKWNDGQLYPENYVYKYPKAGEENSHVWISVYDLAS 253

Query: 336 SDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKK---DGSQERLLVEDS 390
            D K++   +E   + P   W+   +L++  + +  +  + ++      G  + +L E+S
Sbjct: 254 EDTKKMDIGEEKDQYIPRVQWTKDSNLLSIIRMNRRQNILEILHANATTGESKVVLKEES 313

Query: 391 NLQAP-------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           +           T++  G+  I S ++DG     LY   L+G+    I    +
Sbjct: 314 DTYVALNYCDDLTYTNDGKYFIQSSEQDG--YKHLYLYTLDGKLVRQITKGEW 364



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 92/290 (31%), Gaps = 67/290 (23%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMIL 261
            L P  D       FSP+ QKVAY   ++     +Y+ D +  R  +   + +   ++  
Sbjct: 123 SLKPLSDDPQMFATFSPDAQKVAYVFENN-----IYIFDLQSGRTTQVTSDGKINENING 177

Query: 262 APRF--------------SSNGKRALI--------------------------------S 275
              +              S N K+                                   +
Sbjct: 178 GSDWVYEEEFYVTRTFYWSPNSKKLAYYTMDESHVKEYTLQKWNDGQLYPENYVYKYPKA 237

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFIN-ISAS--YSPDSS--QIVFESDREGKEQLYV 330
            +++  + I   DL S  T+++      +       ++ DS+   I+  + R+   ++  
Sbjct: 238 GEENSHVWISVYDLASEDTKKMDIGEEKDQYIPRVQWTKDSNLLSIIRMNRRQNILEILH 297

Query: 331 MQSNGSDQKRISQDKEASYF------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             +   + K + +++  +Y       D  ++  G     +        + +   DG   R
Sbjct: 298 ANATTGESKVVLKEESDTYVALNYCDDLTYTNDGKYFIQSSEQDGYKHLYLYTLDGKLVR 357

Query: 385 LLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            + +                 + +   ++       YSI +NG+N+ L+ 
Sbjct: 358 QITKGEWEVVSMVGIDQKDSKIYYISTENSPLDRTFYSIGMNGKNKKLLG 407



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 62/177 (35%), Gaps = 14/177 (7%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGA--NIRYLTPSRDQILFEPR--FSPNQQKVAYATYDDE 234
           +V +   +G   + + +   D A  + + +    ++  + PR  ++ +   ++    +  
Sbjct: 230 YVYKYPKAGEENSHVWISVYDLASEDTKKMDIGEEKDQYIPRVQWTKDSNLLSIIRMNRR 289

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAP-------RFSSNGKRALISVQKDEAMDIYSV 287
             +   L         K +    S             ++++GK  + S ++D    +Y  
Sbjct: 290 QNILEILHANATTGESKVVLKEESDTYVALNYCDDLTYTNDGKYFIQSSEQDGYKHLYLY 349

Query: 288 DLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRI 341
            L      ++T   +  +S        S+I + S          Y +  NG ++K +
Sbjct: 350 TLDGKLVRQITKGEWEVVSMVGIDQKDSKIYYISTENSPLDRTFYSIGMNGKNKKLL 406


>gi|326798416|ref|YP_004316235.1| dipeptidyl-peptidase IV [Sphingobacterium sp. 21]
 gi|326549180|gb|ADZ77565.1| Dipeptidyl-peptidase IV [Sphingobacterium sp. 21]
          Length = 728

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 59/367 (16%), Positives = 115/367 (31%), Gaps = 67/367 (18%)

Query: 112 VTGRVIKEGKDRLRV------EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           V  +   +G     +      E +L D       +     +   S        S  +   
Sbjct: 29  VKTQWTPDGNGYYEISDGQVLEVKLLDPNHPVVFLDGSALTPQDS--------SAPLKVK 80

Query: 166 ITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPS-RDQILFEPRFSPNQ 223
                 D    +LF  ++ V     +    V D +   ++ L        L   + SP+ 
Sbjct: 81  QFSISADRRKVLLFTNTKRVWRYHTRGDYWVYDINKKELKQLGKGLPASSLMFAKLSPDG 140

Query: 224 QKVAYATYDD---EDILRVYLMDTRIDRAPKRIGNFRSMIL--------APRFSSNGKRA 272
             VAY +  +   ED+   ++     D   + I                  R+SS+GK  
Sbjct: 141 TSVAYVSKHNVYIEDLASNHISQLTEDGTDRIINGTFDWAYEEEFGCRDGFRWSSDGKHI 200

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ---IVFESDREGKEQLY 329
                   ++  Y + L +      T++ +        P + Q     F         +Y
Sbjct: 201 AYWKIDARSIRNYLM-LNT------TDSTYSFTIPVEYPKAGQNPSACF---------IY 244

Query: 330 VMQSNGSDQKRIS-QDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMK---KDGSQE 383
           V+     + K++        ++ P   W+P G  +   +   ++    +M    +DG  +
Sbjct: 245 VVDVKTKENKKMDIPGDPVQHYIPRMEWTPDGQSLILQQLDRKQQESHIMLCSIEDGKTK 304

Query: 384 RLLVED----------SNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +  E            N   PT   W   G++ ++  +KDG     +Y ID+ G+   L
Sbjct: 305 TIYTEQDQAWIDIKSRWNDDDPTGWEWIDDGKAFLWVSEKDG--WRHIYKIDMTGKEALL 362

Query: 431 INTPAYA 437
                  
Sbjct: 363 TKGDYDV 369



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/237 (11%), Positives = 77/237 (32%), Gaps = 53/237 (22%)

Query: 218 RFSPNQQKVAYATYDDEDILR------------------------------VYLMDTRID 247
           R+S + + +AY   D   I                                +Y++D +  
Sbjct: 192 RWSSDGKHIAYWKIDARSIRNYLMLNTTDSTYSFTIPVEYPKAGQNPSACFIYVVDVKTK 251

Query: 248 RAPK-RIGNFRSMILAPR--FSSNGKRALISV--QKDEAMDIYSVDLQSNATERL----- 297
              K  I         PR  ++ +G+  ++    +K +   I    ++   T+ +     
Sbjct: 252 ENKKMDIPGDPVQHYIPRMEWTPDGQSLILQQLDRKQQESHIMLCSIEDGKTKTIYTEQD 311

Query: 298 -----TNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                  + + +   +   +  D    ++ S+++G   +Y +   G +   +++      
Sbjct: 312 QAWIDIKSRWNDDDPTGWEWIDDGKAFLWVSEKDGWRHIYKIDMTGKEA-LLTKGDYDVI 370

Query: 350 FDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGR 402
              +   + + I F+    +  +  +  +   G +   L     +   +   SP+G+
Sbjct: 371 GINLIDQRNEKIYFSASPANATQKYLYQISIKGGKATQLSPTNQAGTHSYRISPNGK 427



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 69/220 (31%), Gaps = 22/220 (10%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPR 218
           I   +     D         E   +G   ++  +   D     N +   P      + PR
Sbjct: 210 IRNYLMLNTTDSTYSFTIPVEYPKAGQNPSACFIYVVDVKTKENKKMDIPGDPVQHYIPR 269

Query: 219 --FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL----------APR-- 264
             ++P+ Q +     D +      ++ +  D   K I   +               P   
Sbjct: 270 MEWTPDGQSLILQQLDRKQQESHIMLCSIEDGKTKTIYTEQDQAWIDIKSRWNDDDPTGW 329

Query: 265 -FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDR 322
            +  +GK  L   +KD    IY +D+       LT   +  I  +     + +I F +  
Sbjct: 330 EWIDDGKAFLWVSEKDGWRHIYKIDMTGKEA-LLTKGDYDVIGINLIDQRNEKIYFSASP 388

Query: 323 EGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               Q  LY +   G    ++S   +A       SP G L
Sbjct: 389 ANATQKYLYQISIKGGKATQLSPTNQAGTHSYRISPNGKL 428



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 66/244 (27%), Gaps = 58/244 (23%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+     Y    D  +L V L+D         +       L P+ S            
Sbjct: 33  WTPDGNG--YYEISDGQVLEVKLLDPN-----HPVVFLDGSALTPQDS----------SA 75

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              +  +S+          TNT              + V+     G    +V   N  + 
Sbjct: 76  PLKVKQFSISADRRKVLLFTNT--------------KRVWRYHTRG--DYWVYDINKKEL 119

Query: 339 KRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL----- 392
           K++ +   AS       SP G  +A+      K  + +     +    L ED        
Sbjct: 120 KQLGKGLPASSLMFAKLSPDGTSVAYVS----KHNVYIEDLASNHISQLTEDGTDRIING 175

Query: 393 -------------QAPTWSPSGRSLIFSRKKDGDTGSKLY--SIDLNGRNETLINTPAYA 437
                            WS  G+ + + +       + L   + D        +  P   
Sbjct: 176 TFDWAYEEEFGCRDGFRWSSDGKHIAYWKIDARSIRNYLMLNTTDSTYSFTIPVEYPKAG 235

Query: 438 SDPQ 441
            +P 
Sbjct: 236 QNPS 239


>gi|170681741|ref|YP_001746017.1| hypothetical protein EcSMS35_4054 [Escherichia coli SMS-3-5]
 gi|170519459|gb|ACB17637.1| conserved hypothetical protein [Escherichia coli SMS-3-5]
          Length = 404

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 403



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 305 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 363 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 391


>gi|158336629|ref|YP_001517803.1| WD-40 repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158306870|gb|ABW28487.1| WD-40 repeat protein [Acaryochloris marina MBIC11017]
          Length = 1703

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 97/315 (30%), Gaps = 50/315 (15%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            R+WDV   + +          +  K A  ++D           D  +    + +      
Sbjct: 1262 RIWDVAKGQTL---------RTLPKQATAVTD------IAISPDGQTLAASMED------ 1300

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               ++ +    G  +  L   ++ +     FSP+   +  A  D      + L      +
Sbjct: 1301 --GTIQLWTLSGQLLHTLKT-KNVVATSVAFSPDGNTLVSAHADH----SLRLWQVETGQ 1353

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
                +    +  L   F  NGK  + S   D+ + +++           T ++  + S  
Sbjct: 1354 LLSTLKGHSAPTLDAAFHPNGKTLV-SASVDKQVRVWA-----------TPSIPEDTSPI 1401

Query: 308  ---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + SPD   +   +  +G  QL+            +   E   +   ++     +   
Sbjct: 1402 LAMAVSPDQQILA-TASLDGVIQLWRPDPQVGKVPFKTLKSETPIYALRFNADSQQLV-- 1458

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                    +  + +   Q  L      + +  +SP+G++L+       D   +L+     
Sbjct: 1459 SGHDSTIQVWDIHEGTVQRTLSGHTGKINSLDFSPNGKTLVSGSD---DQTIRLWDATTG 1515

Query: 425  GRNETLINTPAYASD 439
               +T+       + 
Sbjct: 1516 KPVKTIQAHDGSVTS 1530



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 60/352 (17%), Positives = 120/352 (34%), Gaps = 46/352 (13%)

Query: 111  LVTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSP---ASWRKIAHTISDD 161
            +V   V         V        RLW V+  + +   K  S+P   A++     T+   
Sbjct: 1321 VVATSVAFSPDGNTLVSAHADHSLRLWQVETGQLLSTLKGHSAPTLDAAFHPNGKTLVSA 1380

Query: 162  IYQS-----ITGEKGDFNSRILFVSESV-----VSGIIKNSLCVMDRD---GANIRYLTP 208
                      T    +  S IL ++ S       +  +   + +   D   G        
Sbjct: 1381 SVDKQVRVWATPSIPEDTSPILAMAVSPDQQILATASLDGVIQLWRPDPQVGKVPFKTLK 1440

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            S   I    RF+ + Q++            + + D       + +      I +  FS N
Sbjct: 1441 SETPIYAL-RFNADSQQLV-----SGHDSTIQVWDIHEGTVQRTLSGHTGKINSLDFSPN 1494

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            GK  + S   D+ + ++  D  +    + +        S S  P    +   SD    E 
Sbjct: 1495 GKTLV-SGSDDQTIRLW--DATTGKPVKTIQAHDGSVTSVSMGP--RYLASGSD---DET 1546

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            + + Q +G+  K ++    A      ++P+G+L+A   +      +    +DG+  + L 
Sbjct: 1547 VKLWQLDGTPVKTLTGHGLA-VSQIQFNPEGNLLASASWDNT-IKLW---RDGTLVQTLT 1601

Query: 388  -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
               + + +  + P  + ++ S     D   K++ +D     +TL    A A 
Sbjct: 1602 GHQNGVTSLAFLPD-QPILVSGS--ADQSVKVWQVDQGRLIKTLDGLGAVAQ 1650



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 63/184 (34%), Gaps = 16/184 (8%)

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            V + D    +  + +    + +     S +G+    S++ D  + +++  L       L 
Sbjct: 1261 VRIWDVAKGQTLRTLPKQATAVTDIAISPDGQTLAASME-DGTIQLWT--LSGQLLHTLK 1317

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                +  S ++SPD + +V  +  +   +L+ +           +   A   D  + P G
Sbjct: 1318 TKNVVATSVAFSPDGNTLV-SAHADHSLRLWQV--ETGQLLSTLKGHSAPTLDAAFHPNG 1374

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              +       +               +  + S + A   SP  + ++ +   DG    +L
Sbjct: 1375 KTLVSASVDKQVRVWAT-------PSIPEDTSPILAMAVSPD-QQILATASLDG--VIQL 1424

Query: 419  YSID 422
            +  D
Sbjct: 1425 WRPD 1428


>gi|20090449|ref|NP_616524.1| surface antigen gene [Methanosarcina acetivorans C2A]
 gi|19915465|gb|AAM05004.1| surface antigen gene [Methanosarcina acetivorans C2A]
          Length = 443

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 96/293 (32%), Gaps = 30/293 (10%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF--- 215
           S+ +++ +   K    + ++ +    V G    +  + + D  N+  +  + +++     
Sbjct: 24  SNKVHKQLKIMKVLGITALMILILMDVVGAAPFA-YITNSDSNNLSVIDTATNKVTATVD 82

Query: 216 ---EPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               P     SP+  K AY     +D + +         A  ++G +   I     S +G
Sbjct: 83  VGEHPAGVTVSPDGTK-AYVVNSYDDTVSIIDTTKNKVIATVKVGTYPQNI---AVSPDG 138

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREG-- 324
            +A ++          +V + +    ++T T+ +         SPD  + V+ ++  G  
Sbjct: 139 TKAYVTS-----FSNNTVSVINTTINKVTATVPVGNFPFGVAVSPDGKK-VYVANSGGYS 192

Query: 325 ---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 + V+ +  +           S      SP G  +     +G   +I     +  
Sbjct: 193 TNFTGTVSVIDTTANTAAATIPTGNNSLGV-AISPDGKKVYVANMAGSSISIIDTISNAV 251

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              +     + +    SP G+ +  +          +  ID      T    P
Sbjct: 252 VSTVKT-GRSPKGVAVSPDGKKIYVAINPINSLTGAVDIIDTATNKVTATAVP 303


>gi|325279574|ref|YP_004252116.1| WD40-like beta Propeller containing protein [Odoribacter
           splanchnicus DSM 20712]
 gi|324311383|gb|ADY31936.1| WD40-like beta Propeller containing protein [Odoribacter
           splanchnicus DSM 20712]
          Length = 845

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/260 (15%), Positives = 86/260 (33%), Gaps = 47/260 (18%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK--------------------RIGNFRS 258
           +SP++  + Y   ++    +  L      +  +                    R+     
Sbjct: 305 WSPDRSYLIYYANENYSDPKWELRKLDGIQDRQDYFRNRSYLCKYDFATGLHSRLTWGNL 364

Query: 259 MILAPRFSSNGKRALISVQKDEAM-------DIYSVDLQSNATERLTNTLFINISASYSP 311
                  S++GK+ LIS  +           DIY +D+ +   + L      +IS ++SP
Sbjct: 365 STSLMDISADGKKLLISTSRPAYTEYPYNKQDIYLMDITTQQLDTLWKDRLYSISCTFSP 424

Query: 312 DSSQIVFESDRE---------GKEQL--------YVMQSNGSDQKRISQDKEASYFDPVW 354
           D  +++               GK Q+        Y+          I++D   S  +  W
Sbjct: 425 DGKKLLISGGPSAFGKLGENIGKNQIANQYDTQLYIYDLATKKVDAITRDFNPSVEEMTW 484

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
              G+   + K +   F       DG   R+      +   +++     ++++     D 
Sbjct: 485 HKNGN--IYIKTTDADFVHLYCYADGKFTRIECPGDMILRTSFASHADRMMYTASNT-DY 541

Query: 415 GSKLYSIDLNGRNETLINTP 434
             ++Y+++L      L   P
Sbjct: 542 PPRIYTLNLTDNQAALWADP 561



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 51/141 (36%), Gaps = 14/141 (9%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--ESDREGKEQLYVM 331
            S+      +IY V L       L          S SP     +    +  +G+      
Sbjct: 190 FSLSPQRGKNIYDV-LNGKQVSHL----------SVSPTGKYALVGITNTVDGRSSNNTY 238

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDS 390
               +D++ +      +  +  W P  D ++F +  G   ++     +   Q RL+ ED 
Sbjct: 239 VYRIADKEIVYTFYGNNVRNLQWIPDQDKLSFLQAEGNGQSLYSYDLEKQLQTRLIKEDR 298

Query: 391 NLQAPTWSPSGRSLIFSRKKD 411
            +Q+  WSP    LI+   ++
Sbjct: 299 QIQSCIWSPDRSYLIYYANEN 319



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 61/195 (31%), Gaps = 38/195 (19%)

Query: 264 RFSSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             S  GK AL+    +V    + + Y   +        T       +  + PD  ++ F 
Sbjct: 213 SVSPTGKYALVGITNTVDGRSSNNTYVYRIADKEIVY-TFYGNNVRNLQWIPDQDKLSFL 271

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---TKFSGEKFAIGVM 376
                 + LY        Q R+ ++ +      +WSP    + +     +S  K+ +   
Sbjct: 272 QAEGNGQSLYSYDLEKQLQTRLIKE-DRQIQSCIWSPDRSYLIYYANENYSDPKWELR-- 328

Query: 377 KKDGSQERL------------LVEDSNLQAPTW----------SPSGRSLIFSRKKDGDT 414
           K DG Q+R                       TW          S  G+ L+ S  +   T
Sbjct: 329 KLDGIQDRQDYFRNRSYLCKYDFATGLHSRLTWGNLSTSLMDISADGKKLLISTSRPAYT 388

Query: 415 GS-----KLYSIDLN 424
                   +Y +D+ 
Sbjct: 389 EYPYNKQDIYLMDIT 403


>gi|159108753|ref|XP_001704645.1| WD-40 repeat protein [Giardia lamblia ATCC 50803]
 gi|157432714|gb|EDO76971.1| WD-40 repeat protein [Giardia lamblia ATCC 50803]
          Length = 301

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 75/202 (37%), Gaps = 20/202 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + + +   + D      + L DT   +    +    + + + R S +G+    SV 
Sbjct: 107 SFSIDGRTIVTCSDDK----SIKLFDTTNVQFRVCLSGHTNWVYSARLSPDGRLIA-SVS 161

Query: 278 KDEAMDIYSVDLQS-NATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQS 333
            D ++ I+  D ++ +  + +TN   ++++     +SPD + +         + + +   
Sbjct: 162 DDLSLRIW--DTRTLSCVQAITNDNGLSLNPRVIRWSPDGTTVA----TGCTQDVQLWDV 215

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             S   +             + P G  +  T   G    + +++   S   +   +  + 
Sbjct: 216 RSSTLLQHYSCHTNQVTCLDFHPNGKYMISTGSDGTARILDLVQ-GRSLYTVRGHEGGVN 274

Query: 394 APTWSPSGRSLIFSRKKDGDTG 415
             ++ P G   +F+    GD G
Sbjct: 275 CISFCPDGS--VFAT--GGDDG 292



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 66/186 (35%), Gaps = 19/186 (10%)

Query: 198 RDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D  N+++          ++  R SP+ + +A  + D    L + + DTR     + I N
Sbjct: 127 FDTTNVQFRVCLSGHTNWVYSARLSPDGRLIASVSDD----LSLRIWDTRTLSCVQAITN 182

Query: 256 FRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSP 311
              + L P   R+S +G        +D  +     D++S+   +  +          + P
Sbjct: 183 DNGLSLNPRVIRWSPDGTTVATGCTQDVQLW----DVRSSTLLQHYSCHTNQVTCLDFHP 238

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           +   ++  +  +G  ++  +           +  E       + P G + A     G   
Sbjct: 239 NGKYMI-STGSDGTARI--LDLVQGRSLYTVRGHEGGVNCISFCPDGSVFATGGDDGRVM 295

Query: 371 -FAIGV 375
            F +GV
Sbjct: 296 LFELGV 301


>gi|260655542|ref|ZP_05861030.1| acylamino-acid-releasing enzyme [Jonquetella anthropi E3_33 E1]
 gi|260629990|gb|EEX48184.1| acylamino-acid-releasing enzyme [Jonquetella anthropi E3_33 E1]
          Length = 636

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 6/86 (6%)

Query: 352 PVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           P  SP G  IAF     +K        I   +      R +      +   WSP G SL+
Sbjct: 15  PAVSPDGGTIAFLVHRADKESNRYESNIWTCRLSDGVLRQMTFSGREKFFCWSPDGSSLV 74

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLI 431
           F+ ++  D G+  Y + L G     +
Sbjct: 75  FASERTDDEGTVFYRLSLEGGEAQRL 100



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 44/116 (37%), Gaps = 12/116 (10%)

Query: 263 PRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           P  S +G      V + +        +I++  L      ++T +        +SPD S +
Sbjct: 15  PAVSPDGGTIAFLVHRADKESNRYESNIWTCRLSDGVLRQMTFS-GREKFFCWSPDGSSL 73

Query: 317 VFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFSGE 369
           VF S+R  +     Y +   G + +R+    + +    VW  P G  +   ++   
Sbjct: 74  VFASERTDDEGTVFYRLSLEGGEAQRLFSLPQKA--GAVWELPDGRFLVRARWVPS 127



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 7/112 (6%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVY---LMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           + L  P  SP+   +A+  +  +     Y   +   R+     R   F        +S +
Sbjct: 10  RFLSRPAVSPDGGTIAFLVHRADKESNRYESNIWTCRLSDGVLRQMTFSGREKFFCWSPD 69

Query: 269 GKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYS-PDSSQIV 317
           G   + + ++  DE    Y + L+    +RL  +L     A +  PD   +V
Sbjct: 70  GSSLVFASERTDDEGTVFYRLSLEGGEAQRL-FSLPQKAGAVWELPDGRFLV 120



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/322 (13%), Positives = 97/322 (30%), Gaps = 67/322 (20%)

Query: 175 SRILFVSESVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
             I F+         +    +      DG   +     R++      +SP+   + +A+ 
Sbjct: 22  GTIAFLVHRADKESNRYESNIWTCRLSDGVLRQMTFSGREKFFC---WSPDGSSLVFASE 78

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK-----RALISVQKDEAMDIYS 286
             +D   V+   +      +R+ +      A     +G+     R + S++  +  +   
Sbjct: 79  RTDDEGTVFYRLSLEGGEAQRLFSLPQKAGAVWELPDGRFLVRARWVPSIENPDEANYQI 138

Query: 287 VD-----------------------LQSNATERLTNTLFINISASYSPDSSQIV-----F 318
            D                        QS   +RLT+  F   S +   D SQ++     F
Sbjct: 139 FDQLPFLANGQGYIGSERTGLGVYAPQSGTWKRLTDETFDLASCTMKDDFSQVLAVGCSF 198

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--------TKFSGEK 370
              +     + +        + +++    S+    W    D+IA            +   
Sbjct: 199 TDVKPQTNSVCLFDLADGTSRDLTEGLAMSFSSAGWHGD-DVIATGCDRADRGVHKNPTF 257

Query: 371 FAIG--------------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           F +               +    GS  R    D   +   +   G  L++   +     S
Sbjct: 258 FKLADSALTPLSPTLDTGLHSTVGSDCRYGQADQTGE---FFDDGLGLVYCSTEGFR--S 312

Query: 417 KLYSIDLNGRNETLINTPAYAS 438
            L+ ++ +G +  L +  +  S
Sbjct: 313 FLFRLNADGSSSRLTDLSSVDS 334



 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 51/352 (14%), Positives = 109/352 (30%), Gaps = 44/352 (12%)

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWD----VKDRKQIIGKKFF--SSPASWRKIAH 156
           W     + LV  R +   ++     ++++D    + + +  IG +       A       
Sbjct: 111 WELPDGRFLVRARWVPSIENPDEANYQIFDQLPFLANGQGYIGSERTGLGVYAPQSGTWK 170

Query: 157 TISDDIYQ-SITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQIL 214
            ++D+ +  +    K DF+  +             NS+C+ D  DG + R LT       
Sbjct: 171 RLTDETFDLASCTMKDDFSQVLAVGCSFTDVKPQTNSVCLFDLADGTS-RDLTEGLAMSF 229

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG---------------NFRSM 259
               +  +          D  + +        D A   +                 +   
Sbjct: 230 SSAGWHGDDVIATGCDRADRGVHKNPTFFKLADSALTPLSPTLDTGLHSTVGSDCRYGQA 289

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                F  +G   +    +     ++ ++   ++  RLT+   ++   S+   S    F 
Sbjct: 290 DQTGEFFDDGLGLVYCSTEGFRSFLFRLNADGSS-SRLTDLSSVD---SFCVRSGVTAFV 345

Query: 320 S-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-------------QGDLIAFTK 365
             +  G ++LYV+   GS  +R+S   +A   +    P              G  I    
Sbjct: 346 GMEPNGLQELYVLN--GSGVRRLSHFNDAILSELQVQPAHYVSVQSGDVTLDGWYIEPLN 403

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
               K    ++   G    +  +    +   W+  G  +IF+  +  D    
Sbjct: 404 CQPGKKYPTILNIHGGPRGVYGDVFFHEMQCWAAQGYGVIFTNPRGSDGRGN 455


>gi|260941251|ref|XP_002614792.1| hypothetical protein CLUG_05570 [Clavispora lusitaniae ATCC 42720]
 gi|238851978|gb|EEQ41442.1| hypothetical protein CLUG_05570 [Clavispora lusitaniae ATCC 42720]
          Length = 744

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 74/223 (33%), Gaps = 22/223 (9%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D   +  V   D       +R+      +    FS + +   IS  +D+   ++S+D
Sbjct: 447 WSLDGRPLRSVVKRDPANGDNTRRLVGHSGPVYGMSFSPDNRYL-ISASEDKTARLWSLD 505

Query: 289 LQSNATERLTNTLFINISASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             ++    L +    N    +    SP        S     +   +  ++     RI   
Sbjct: 506 TYTS----LVSYKGHN-QPVWDVKFSPLGHYFATASH---DQTARLWATDHIYPLRIFAG 557

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                    + P    + FT  S +   +  +    +    +     +     SP GR L
Sbjct: 558 HINDVDCVEFHPNSSYV-FTGSSDKTCRMWDVHTGHAARVFIGHTGAVNCMAVSPDGRWL 616

Query: 405 IFSRKK------DGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             + +       D  +G +L S+  +GR+   I + A++ D  
Sbjct: 617 ASAGEDSVVNIWDAGSGRRLKSMRGHGRSS--IYSLAFSRDGS 657



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/253 (18%), Positives = 88/253 (34%), Gaps = 23/253 (9%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEP 217
             +  Q      G FN    F+    + G    S+   D  +G N R L      +    
Sbjct: 425 CMEFNQDCNLVAGGFNDS--FIKLWSLDGRPLRSVVKRDPANGDNTRRLVGHSGPVYGM- 481

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +  A+ D     R++ +DT       +  N    +   +FS  G     +  
Sbjct: 482 SFSPDNRYLISASED--KTARLWSLDTYTSLVSYKGHNQP--VWDVKFSPLGHYFA-TAS 536

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D+   +++ D       R+      ++    + P+SS  VF    +   +++    +  
Sbjct: 537 HDQTARLWATDHIY--PLRIFAGHINDVDCVEFHPNSSY-VFTGSSDKTCRMW--DVHTG 591

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP- 395
              R+      +      SP G  +A    +GE   + +    GS  RL     + ++  
Sbjct: 592 HAARVFIGHTGAVNCMAVSPDGRWLA---SAGEDSVVNIWDA-GSGRRLKSMRGHGRSSI 647

Query: 396 ---TWSPSGRSLI 405
               +S  G  L+
Sbjct: 648 YSLAFSRDGSVLV 660


>gi|170113765|ref|XP_001888081.1| mycorrhiza-induced NACHT/WD40-repeat domain protein, NWD [Laccaria
           bicolor S238N-H82]
 gi|164636915|gb|EDR01205.1| mycorrhiza-induced NACHT/WD40-repeat domain protein, NWD [Laccaria
           bicolor S238N-H82]
          Length = 350

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/254 (11%), Positives = 85/254 (33%), Gaps = 25/254 (9%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----------YATYD 232
            V+SG    ++ + +     +          +    FS +  +V           +    
Sbjct: 96  QVISGSNDKTVRIWNVTTGEVEAELKGHTNDVNSVTFSQDGSRVVSGLNDKTVQIWNVTT 155

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +    V + +    +    +    + + +  FS +G + ++S   D+ + I+  ++ + 
Sbjct: 156 GQSDKTVQIWNVTTGQVEAELKGHTNDVNSVAFSPDGSQ-VVSGLNDKTVQIW--NVTTG 212

Query: 293 ATERLTNTLFINI-SASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASY 349
             E        ++ S ++SPD S++V      G   + + +        +   +      
Sbjct: 213 QVEAELKGHTNDVKSVAFSPDGSRVV-----SGLKDKTVQIWNVTTGQVEAELKGHTNDV 267

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               +S  G  +  +    +   I  +     +  L    +++ +  +S  G  ++    
Sbjct: 268 NSVTFSQDGSRVV-SGSEDKTIQIWNVTTGEVEAELKGHTNDVNSVAFSLDGSRVV---S 323

Query: 410 KDGDTGSKLYSIDL 423
              D   +++++  
Sbjct: 324 GSEDKTVRIWNVTT 337



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 81/221 (36%), Gaps = 22/221 (9%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D  +   L      ++   RFS +  +V   ++D+     + + +    +    +    
Sbjct: 27  SDSWDPAELIMQNGSLVPSVRFSQDGSQVVSGSWDE----MIRIWNVMTGKVEAELKGHT 82

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQI 316
           S + +  FS +G + +IS   D+ + I+  ++ +   E        ++ S ++S D S++
Sbjct: 83  SWVNSVAFSQDGSQ-VISGSNDKTVRIW--NVTTGEVEAELKGHTNDVNSVTFSQDGSRV 139

Query: 317 VFESDREGKEQLY------------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           V     +   Q++            +        +   +          +SP G  +  +
Sbjct: 140 V-SGLNDKTVQIWNVTTGQSDKTVQIWNVTTGQVEAELKGHTNDVNSVAFSPDGSQVV-S 197

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             + +   I  +     +  L    +++++  +SP G  ++
Sbjct: 198 GLNDKTVQIWNVTTGQVEAELKGHTNDVKSVAFSPDGSRVV 238



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 69/202 (34%), Gaps = 14/202 (6%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +V +G    ++ + +     +          +    FSP+  +V     D      V + 
Sbjct: 152 NVTTGQSDKTVQIWNVTTGQVEAELKGHTNDVNSVAFSPDGSQVVSGLNDK----TVQIW 207

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +    +    +    + + +  FS +G R ++S  KD+ + I+  ++ +   E       
Sbjct: 208 NVTTGQVEAELKGHTNDVKSVAFSPDGSR-VVSGLKDKTVQIW--NVTTGQVEAELKGHT 264

Query: 303 INI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            ++ S ++S D S++V  S+    + + +      + +   +          +S  G  +
Sbjct: 265 NDVNSVTFSQDGSRVVSGSE---DKTIQIWNVTTGEVEAELKGHTNDVNSVAFSLDGSRV 321

Query: 362 AFTKFSGEKFAIGVMKKDGSQE 383
                      + +      Q 
Sbjct: 322 VSGSEDKT---VRIWNVTTGQV 340



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 74/208 (35%), Gaps = 21/208 (10%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            T +   + +V    +      + I    S++ + RFS +G + ++S   DE + I++V 
Sbjct: 12  YTANVSRVPKVTHGLSDSWDPAELIMQNGSLVPSVRFSQDGSQ-VVSGSWDEMIRIWNV- 69

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +       L        S ++S D SQ++  S+    + + +      + +   +     
Sbjct: 70  MTGKVEAELKGHTSWVNSVAFSQDGSQVISGSN---DKTVRIWNVTTGEVEAELKGHTND 126

Query: 349 YFDPVWSPQGDLIA-------------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                +S  G  +               T  S +   I  +     +  L    +++ + 
Sbjct: 127 VNSVTFSQDGSRVVSGLNDKTVQIWNVTTGQSDKTVQIWNVTTGQVEAELKGHTNDVNSV 186

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +SP G  ++       D   +++++  
Sbjct: 187 AFSPDGSQVV---SGLNDKTVQIWNVTT 211


>gi|158339089|ref|YP_001520266.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158309330|gb|ABW30947.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1191

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 55/318 (17%), Positives = 107/318 (33%), Gaps = 55/318 (17%)

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGA--QVLVTGRVIKEGKDRLRVEFR 129
           DL  S         SF Q  ++  ++    +W+  G   Q+L TG            E R
Sbjct: 549 DLAHS---------SFSQTFSSIRAVTFSPEWSQTGVENQLLATGDTSG--------EIR 591

Query: 130 LWDVKDRKQII----------GKKFFSSPASWRKIAHTISDDIYQSITGE----KGDFNS 175
           LW V + + I+             F          +   S  I+ + TG+         S
Sbjct: 592 LWQVPEGQNILTLSGHTNWVCALAFHPKEKLLASASADHSIKIWNTHTGQCLNTLIGHRS 651

Query: 176 RILFVSESVVSGIIKNSLCVMDRD----------GANIRYLTPSRDQILFEPRFSPNQQK 225
            ++ V+ S     ++  L     D          G  ++ L   +  + +     P  + 
Sbjct: 652 WVMSVAYSPSGKELQPFLASCSADRKIKLWDVQTGQCLQTLAEHQHGV-WSIAIDPQGKY 710

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           VA A+ D      V L D +  +  +        + +  FS +GK    +   D+ + ++
Sbjct: 711 VASASADQ----TVKLWDVQTGQCLRTYQGHSQGVWSVTFSPDGKLLA-TGSADQTIKLW 765

Query: 286 SVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             ++Q+               S  ++P    +V  S     + + + +       RI   
Sbjct: 766 --NVQTGQCLNTFKGHQNWVWSVCFNPQGDILVSGS---ADQSIRLWKIQTGQCLRILSG 820

Query: 345 KEASYFDPVWSPQGDLIA 362
            +   +    SP+G+L+A
Sbjct: 821 HQNWVWSVAVSPEGNLMA 838



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 77/239 (32%), Gaps = 20/239 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ---QKVAYATYDDEDILRVYLMDTRI 246
           K +L   D   ++      S   + F P +S      Q +A      E    + L     
Sbjct: 542 KINLSGCDLAHSSFSQTFSSIRAVTFSPEWSQTGVENQLLATGDTSGE----IRLWQVPE 597

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINI 305
            +    +    + + A  F    ++ L S   D ++ I+  +  +      L       +
Sbjct: 598 GQNILTLSGHTNWVCALAFHPK-EKLLASASADHSIKIW--NTHTGQCLNTLIGHRSWVM 654

Query: 306 SASYSPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S +YSP   ++  F +      ++ +         +   + +   +     PQG  +A  
Sbjct: 655 SVAYSPSGKELQPFLASCSADRKIKLWDVQTGQCLQTLAEHQHGVWSIAIDPQGKYVASA 714

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   + +      Q     +     + + T+SP G+ L        D   KL+++
Sbjct: 715 SADQT---VKLWDVQTGQCLRTYQGHSQGVWSVTFSPDGKLLA---TGSADQTIKLWNV 767



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 63/178 (35%), Gaps = 11/178 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ +   +   +       +  +    F P  + +A  +YD      + L +  
Sbjct: 965  SGSADQTMKLWQTETGQLLQTFSGHENWVCSVAFHPQAEVLASGSYDR----TIKLWNMT 1020

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
              +  + +    S + A  FS +G+    S   D+ + ++  D+Q+    + L       
Sbjct: 1021 SGQCVQTLKGHTSGLWAIAFSPDGELLA-SCGTDQTIKLW--DVQTGQCLKTLRGHENWV 1077

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +S ++ P    +   S       L V     S+  +     +   +   +S  G ++A
Sbjct: 1078 MSVAFHPLGRLLASAS---ADHTLKVWDVQSSECLQTLSGHQNEVWSVAFSFDGQILA 1132



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 99/356 (27%), Gaps = 86/356 (24%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      +L          +LW+V+  + +    F           H   + ++     
Sbjct: 743  SVTFSPDGKLLATGSADQTIKLWNVQTGQCL--NTFKG---------HQ--NWVWSVCFN 789

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             +GD            VSG    S+ +          +       ++    SP    +A 
Sbjct: 790  PQGDIL----------VSGSADQSIRLWKIQTGQCLRILSGHQNWVWSVAVSPEGNLMAS 839

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV- 287
             + D      + L D    +  K    + + + +  F   G   L S   D+ +  +S  
Sbjct: 840  GSEDR----TLRLWDIHQGQCLKTWQGYGNWVRSIVFHPQG-EVLYSGSTDQVIKRWSAQ 894

Query: 288  ---------------------------------------DLQSNA-TERLTNTLFINISA 307
                                                   DLQ++     +T  L    S 
Sbjct: 895  SGKYLGALSESANAIWTMACHPTAQWLASGHEDSSVKLWDLQTHQCIYAITRHLNTVWSV 954

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +++P    +   S     + + + Q+      +     E       + PQ +++A   + 
Sbjct: 955  AFNPSGDYLASGS---ADQTMKLWQTETGQLLQTFSGHENWVCSVAFHPQAEVLASGSYD 1011

Query: 368  GEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 I +      Q    +    S L A  +SP G  L        D   KL+ +
Sbjct: 1012 RT---IKLWNMTSGQCVQTLKGHTSGLWAIAFSPDGELLA---SCGTDQTIKLWDV 1061


>gi|300940873|ref|ZP_07155401.1| conserved hypothetical protein [Escherichia coli MS 21-1]
 gi|300454390|gb|EFK17883.1| conserved hypothetical protein [Escherichia coli MS 21-1]
          Length = 416

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 403


>gi|91794667|ref|YP_564318.1| transcriptional regulatory protein-like protein [Shewanella
           denitrificans OS217]
 gi|91716669|gb|ABE56595.1| transcriptional regulatory protein-like protein [Shewanella
           denitrificans OS217]
          Length = 691

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/320 (16%), Positives = 114/320 (35%), Gaps = 62/320 (19%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYAT 230
              S  +     +  G     +  +D + +N   + P  +++    P+FS N + + + +
Sbjct: 257 ISKSNKIIAINYLHEGTNTIEVVTIDDNSSNKTLIIPKDKNENHSLPKFSYNDEYLFFVS 316

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK-RALISVQKDEAMDIYSVDL 289
                   +   + +     +   NF S++       +GK   LIS +KD    I+S++L
Sbjct: 317 NIKTRNPHLKKYNMKELSTHRVNKNFYSIL---DIEPHGKNELLISGKKDGQFSIWSLNL 373

Query: 290 QSNATER--------------------------------------------LTNTLFINI 305
             N   +                                            ++N+  I+I
Sbjct: 374 NKNTLLQNPSNPLGEFQSDLSSSNFDASTIVYKNWKRNIIIGHSDLGGKIEVSNSNAIDI 433

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           ++ YS +     F S+R G  +++   S+  + ++I+ +K  S   P+ S     +AF  
Sbjct: 434 NSIYSRELQTFYFVSNRSGAFEIW--SSHHGETQQITLEKANSLGQPLLSTDLKKLAFLN 491

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLY 419
            S     + ++       +    +     P       WS +G ++I+S   DG      +
Sbjct: 492 KSNILEQLIILNL-----KPESSNYKYDFPKNSYLLNWSSNGENIIYSYISDGQYTLSSF 546

Query: 420 SIDLNGRNETLINTPAYASD 439
           +I  N   +  +N   YA +
Sbjct: 547 NIKSNQHTKIAMNAGMYAKE 566


>gi|256820650|ref|YP_003141929.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Capnocytophaga ochracea DSM 7271]
 gi|256582233|gb|ACU93368.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Capnocytophaga ochracea DSM 7271]
          Length = 633

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 18/182 (9%)

Query: 265 FSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQ 315
           +S +GK+ L   +             DIY  DL S  T  LT  +   + +  Y+ +   
Sbjct: 176 WSLDGKKVLYVTKAKVGTDYVLSTNTDIYEYDLTSKKTTNLTEGMMGYDTNPQYNKEGVL 235

Query: 316 IVFESDREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                  +G       LY+++     +  ++ + + + F   WS  G  I     +    
Sbjct: 236 AWLSMAHDGNEADKNDLYILK--DGKRINLTANWDNTIFSYRWSNDGKQIYLIAATQGTE 293

Query: 372 AIGVMKK--DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + V+      +  R L +           +G  L+  R  D +  ++LY+I+L  +   
Sbjct: 294 QVFVVAPFSKDTTPRQLTQGVFDVNSIVGQAGDQLVVMRT-DMNHAAELYTINLKEKKGR 352

Query: 430 LI 431
           + 
Sbjct: 353 IT 354



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 79/215 (36%), Gaps = 18/215 (8%)

Query: 176 RILFVSESVVSG----IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           ++L+V+++ V           +   D        LT         P++   +  +A+ + 
Sbjct: 182 KVLYVTKAKVGTDYVLSTNTDIYEYDLTSKKTTNLTEGMMGYDTNPQY-NKEGVLAWLSM 240

Query: 232 DDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
              D       D  I +  KRI    N+ + I + R+S++GK+  +         ++ V 
Sbjct: 241 AH-DGNEADKNDLYILKDGKRINLTANWDNTIFSYRWSNDGKQIYLIAATQGTEQVFVVA 299

Query: 289 LQSN--ATERLTNTLFINISASYSPDSSQ-IVFESDREGKEQLYVMQSNGSDQK----RI 341
             S      +LT  +F ++++       Q +V  +D     +LY +       +    ++
Sbjct: 300 PFSKDTTPRQLTQGVF-DVNSIVGQAGDQLVVMRTDMNHAAELYTINLKEKKGRITLSQL 358

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           S   +  Y      P  + I  T   G++    V+
Sbjct: 359 SHFNDELYKGIAECPIKERIIKTT-DGKRMHAWVI 392


>gi|163848417|ref|YP_001636461.1| WD40 domain-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222526342|ref|YP_002570813.1| WD40 domain-containing protein [Chloroflexus sp. Y-400-fl]
 gi|163669706|gb|ABY36072.1| WD40 domain protein beta Propeller [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450221|gb|ACM54487.1| WD40 domain protein beta Propeller [Chloroflexus sp. Y-400-fl]
          Length = 550

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/333 (14%), Positives = 105/333 (31%), Gaps = 68/333 (20%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +GD +  +  +     S      L  MD DG N   L       +  P +SP+ Q++A  
Sbjct: 215 RGDGSRPLAVIRREGDS----RFLYRMDTDGGNRTLLYRGLLNNVRNPVWSPDGQRIAVV 270

Query: 230 TYDD--------------------------EDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            Y+                               +V+   ++       +G        P
Sbjct: 271 DYNTWPWPVPDPDPQNNLLASAITVLNANGGGGQQVFQTQSQKGSRCPFVG-VPGQSEVP 329

Query: 264 R----------FSSNGKRALISVQK----------DEAMDIYSVDLQSNATERLTNTLFI 303
                       S++  + +  +              A +I+    + N T   T     
Sbjct: 330 SQILRVNHLAWLSAD--QLVFDIVGFNQFCNGQVTGGAANIHVAPARPNNTFPPTLAAAA 387

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +  + + +  +++FE        ++ + +  S               PVWSP     A 
Sbjct: 388 -VRPTANRNG-RVLFEHFGGRTSGIWEVVATSSSPTPELLLAGGRETQPVWSPDSRRFAV 445

Query: 364 TKF--------SGEKFAIGVMKKDGSQE--RLLV--EDSNLQAPTWSPSGRSLIFSRKKD 411
            +         S    AI V  +D      ++L      ++++ +WSP+G  L ++ ++ 
Sbjct: 446 VRDTVSPSADASERVTAIMVYDRDNLALPRQVLFADHGRSVRSISWSPNGAYLAYTLEQA 505

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            +  S ++ +++       I T   + +  W  
Sbjct: 506 -NGQSDIWWLEIASGATGPITTDGVSLEASWRP 537



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 70/509 (13%), Positives = 127/509 (24%), Gaps = 88/509 (17%)

Query: 8   AEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSE 67
              L   + L   ++L      +      +       +   +I    +     +G   ++
Sbjct: 1   MYRLPASLVLFTGVILFLVATFSIAQGQPQNLIQDGGFEQGAI---NWAGCGNVGLVDAQ 57

Query: 68  VVSKDLQRSDVFNLI-----SQDSFKQKI--TNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           V   +   +  +              Q    T P  I + Q      A  +      +  
Sbjct: 58  VSGSEFVYAGRYAAALGIDADGSGCPQLPNLTTPKQILQQQLSIPANAPAVTVSFWYRAA 117

Query: 121 KDRLRVEFRL------WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF- 173
                V+  L      +D       +G      P  W+             +TGE  D  
Sbjct: 118 AGT-AVDMFLARGLYQFDPSLGGVKLGSFATDLPPGWQLY--------RTVLTGENLDRV 168

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             + LF S  + S         +  D   +             P    +  +       +
Sbjct: 169 RGQTLFFSIVIQSDAPTEETAYLLVDDVRVVAADQRTRASPLPPALRGDGSRPLAVIRRE 228

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE------------- 280
            D   +Y MDT             + +  P +S +G+R  +                   
Sbjct: 229 GDSRFLYRMDTDGGNRTLLYRGLLNNVRNPVWSPDGQRIAVVDYNTWPWPVPDPDPQNNL 288

Query: 281 -AMDIYSVDLQSNATERLTNTLF-----------------------INISASYSPDSSQI 316
            A  I  ++      +++  T                         +N  A  S D  Q+
Sbjct: 289 LASAITVLNANGGGGQQVFQTQSQKGSRCPFVGVPGQSEVPSQILRVNHLAWLSAD--QL 346

Query: 317 VFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSP--------QGDLIAFTKFS 367
           VF  D  G  Q    Q  G      ++  +  + F P  +         +   + F  F 
Sbjct: 347 VF--DIVGFNQFCNGQVTGGAANIHVAPARPNNTFPPTLAAAAVRPTANRNGRVLFEHFG 404

Query: 368 GEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKK------DGDTGSKLY 419
           G    I  +    S     LL+       P WSP  R     R          +  + + 
Sbjct: 405 GRTSGIWEVVATSSSPTPELLLAGGRETQPVWSPDSRRFAVVRDTVSPSADASERVTAIM 464

Query: 420 SIDLNG----RNETLINTPAYASDPQWVG 444
             D +     R     +         W  
Sbjct: 465 VYDRDNLALPRQVLFADHGRSVRSISWSP 493



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 71/196 (36%), Gaps = 19/196 (9%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIA----HTISDDIYQSITGEKGDFNSRILFVSESVV 185
           ++D+    Q    +     A+         +T    +  +      + N R+LF      
Sbjct: 347 VFDIVGFNQFCNGQVTGGAANIHVAPARPNNTFPPTLAAAAVRPTANRNGRVLFEHF--- 403

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD-------DEDILR 238
            G   + +  +    ++             +P +SP+ ++ A             E +  
Sbjct: 404 -GGRTSGIWEVVATSSSPTPELLLAGGRETQPVWSPDSRRFAVVRDTVSPSADASERVTA 462

Query: 239 VYLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATE 295
           + + D      P+++   +    + +  +S NG     ++ Q +   DI+ +++ S AT 
Sbjct: 463 IMVYDRDNLALPRQVLFADHGRSVRSISWSPNGAYLAYTLEQANGQSDIWWLEIASGATG 522

Query: 296 RLTNTLFINISASYSP 311
            +T    +++ AS+ P
Sbjct: 523 PITTD-GVSLEASWRP 537


>gi|218702536|ref|YP_002410165.1| hypothetical protein ECIAI39_4291 [Escherichia coli IAI39]
 gi|218372522|emb|CAR20397.1| conserved hypothetical protein [Escherichia coli IAI39]
          Length = 404

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 403



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 305 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 363 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 391



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 51/148 (34%), Gaps = 32/148 (21%)

Query: 294 TERLT----NTLFINISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRISQDK 345
            +++T    N L  N +  ++PDS  +VF+    G     E +  +  +  + + I +  
Sbjct: 1   MKQITFAPRNHLLTNTNP-WTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVIYRAS 59

Query: 346 EASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMK--------KDGSQERLLVEDSNLQAP- 395
           + +Y   V   P+ +   F                       +G +   L +  ++ AP 
Sbjct: 60  QGAYVGVVTVHPKSEKYVFIHGPENPDETWYYDFHHRRGVIVEGGKVSNL-DAMDITAPY 118

Query: 396 ------------TWSPSGRSLIFSRKKD 411
                        +SP+G  + F+    
Sbjct: 119 TPGALRGGSHVHVFSPNGERVSFTYNDH 146


>gi|31419799|gb|AAH53391.1| WD repeat and SOCS box-containing 1 [Mus musculus]
          Length = 421

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 68/199 (34%), Gaps = 18/199 (9%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   M+    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWDLKDDGNMVKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPD S +         + +++   +     R  +          +SP 
Sbjct: 211 RAHQNWVYSCAFSPDCSMLC---SVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKD-----GSQERLLV-------EDSNLQAPTWSPSGRSLI 405
           G L+A   +    +A      D     G               D  ++A ++S  G  + 
Sbjct: 268 GALLATASYDTRVYAWDPHNGDLLMEFGHLFPSPTPIFAGGANDRWVRAVSFSHDGLHVA 327

Query: 406 FSRKKDGDTGSKLYSIDLN 424
                  D   + + ID +
Sbjct: 328 ---SLADDKMVRFWRIDED 343



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L + + +    +++PD S ++  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K +   +   Y    +SP   ++     S   F +  M K     +L     
Sbjct: 200 LKDDGNMVKVLRAHQNWVY-SCAFSPDCSMLCSVGASKAVF-LWNMDKYTMIRKLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 258 DVVACDFSPDGALLATASY 276


>gi|330842836|ref|XP_003293375.1| WD-40 repeat-containing protein [Dictyostelium purpureum]
 gi|325076290|gb|EGC30088.1| WD-40 repeat-containing protein [Dictyostelium purpureum]
          Length = 331

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 85/230 (36%), Gaps = 24/230 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           ++Y      + +   +FSP+ + +A A+ D      + +         K +   +  I  
Sbjct: 33  LKYTLKGHQKAISSVKFSPDGKWLASASADS----TIKIWGAYDGIFEKTLEGHKEGISD 88

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESD 321
             +S + K    S   D+ + I+  D++S     +       +   S++P S+ IV  S 
Sbjct: 89  IAWSHDSKFIC-SASDDKTIRIW--DIESPKPIAILKGHTQYVFGVSFNPQSNLIVSGSF 145

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               E + +      +  +             ++  G LI    + G    I     D S
Sbjct: 146 ---DENVKIWDVKTGECTKTLPAHSDPVTGVHFNRDGTLIVSGSYDGTV-RIW----DTS 197

Query: 382 QERLLVEDSNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             +LL   S  ++P      +SP+G+ ++       D   +L++ + N +
Sbjct: 198 TGQLLNTISADESPQVSFVKFSPNGKFVL---TGTLDNTLRLWAYNSNKK 244


>gi|260911605|ref|ZP_05918190.1| dipeptidyl-peptidase IV [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634311|gb|EEX52416.1| dipeptidyl-peptidase IV [Prevotella sp. oral taxon 472 str. F0295]
          Length = 734

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 24/185 (12%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTL---FINISASYSPDSSQIVFESDREGKEQLY 329
             SV     +D+  V   + + E ++        ++ A  S D  +IV  S + GK+   
Sbjct: 15  AASVSAGGNLDLKKVTDGTFSAEYISGIKPIEGTDLYARISDDGQRIVRYSFKTGKQVDV 74

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQE 383
           +   N +  +++      S+   + SP G  I     S + +         +      + 
Sbjct: 75  LFDVNDTQGQKVK-----SFDSYILSPDGTRILICTNSQKIYRRTFKATYYIYTVASRRL 129

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS-----IDLNGRNETLINTPAYAS 438
             L +    Q PTWSP  R + F R  +      LY      I  +G+   +IN      
Sbjct: 130 DKLSDGGPQQNPTWSPDSRQVAFVRDNNIFLVKLLYDNAESQITKDGKQNEVINGV---- 185

Query: 439 DPQWV 443
            P WV
Sbjct: 186 -PDWV 189



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 48/385 (12%), Positives = 120/385 (31%), Gaps = 63/385 (16%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F+      +   I   +    +   +  G +++   R   +   ++ V F + D + +
Sbjct: 32  GTFS----AEYISGIKPIEGTDLYARISDDGQRIV---RYSFKTGKQVDVLFDVNDTQGQ 84

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           K      +  SP   R +  T S  IY+          +  ++   S     +       
Sbjct: 85  KVKSFDSYILSPDGTRILICTNSQKIYRRTFK-----ATYYIYTVASRRLDKL------- 132

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-----TRIDRAPK 251
             DG   +            P +SP+ ++VA+   ++  ++++   +     T+  +  +
Sbjct: 133 -SDGGPQQ-----------NPTWSPDSRQVAFVRDNNIFLVKLLYDNAESQITKDGKQNE 180

Query: 252 RIGNFR--------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            I                +  F+++G         ++ +  +S+ +       L      
Sbjct: 181 VINGVPDWVNEEEFGTSSSLVFNADGTMICWVRYDEKDVKTFSLQMYKG---LLPAHDQN 237

Query: 304 NISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW----SPQG 358
               S +S    +     +   K  ++         +++    +A  + P      +   
Sbjct: 238 ETYPSLFSYKYPKA---GEANAKVSVWSFDIKSRQTRKLDVPLDADGYIPRIKTTNNADM 294

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDG 412
            L+       +   +  +    +  +LLV + + +          S    S++    +DG
Sbjct: 295 ILVYTMNRHQDVLNVYTVNPRSTVAQLLVREKSDKYVKEEAIANISVYNNSILLPSDRDG 354

Query: 413 DTGSKLYSIDLNGRNETLINTPAYA 437
                LY  D+ G+    I    Y 
Sbjct: 355 YM--HLYLYDMGGKQIRKIGDGNYD 377


>gi|119488526|ref|XP_001262713.1| WD domain protein [Neosartorya fischeri NRRL 181]
 gi|119410871|gb|EAW20816.1| WD domain protein [Neosartorya fischeri NRRL 181]
          Length = 1537

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 81/235 (34%), Gaps = 26/235 (11%)

Query: 193  LCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +C+ D  G    + L    D  +     SP+ + +A  T        V + D       +
Sbjct: 1013 ICLWDTAGMVCDKTLEDVTDYGVASIALSPDGKLLAVCTDRG-----VQVWDIAAGVVKQ 1067

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            ++      + +  FS + K   +      A+     D +    E+ +N  +    ++++ 
Sbjct: 1068 QLPKSPEDVQSVAFSPDSKSLALGSWTQTAIW----DFKDVTFEQKSNGDYFRPFSAFTA 1123

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            D   +   S   GK Q +   +     ++I Q + +       SP  + +A  +      
Sbjct: 1124 DGRFVALNSY--GKVQFW--DAADPVCEQILQGRLSDARSVSRSPDANYLASVER----- 1174

Query: 372  AIGVMKKDGSQ-ERLLVEDSNLQAPTW---SPSGRSLIFSRKKDGDTGSKLYSID 422
             + V   DGS  E          + ++   SP G  L+           +L++ D
Sbjct: 1175 NVSVRLWDGSICEAEQTSPGRGASVSFLSCSPDGTLLLCVST---GASMQLWTTD 1226



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 52/351 (14%), Positives = 108/351 (30%), Gaps = 57/351 (16%)

Query: 113  TGRVIKEGKDRLRVEF-----RLWDVKDRKQIIGKKFFSSPASWRKIAHT---------- 157
               +      +L         ++WD+     ++ ++   SP   + +A +          
Sbjct: 1035 VASIALSPDGKLLAVCTDRGVQVWDIAAG--VVKQQLPKSPEDVQSVAFSPDSKSLALGS 1092

Query: 158  --------ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI--RYLT 207
                      D  ++      GD+       +       + +   V   D A+     + 
Sbjct: 1093 WTQTAIWDFKDVTFEQ--KSNGDYFRPFSAFTADGRFVALNSYGKVQFWDAADPVCEQIL 1150

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-- 265
              R         SP+   +A      E  + V L D  I  A +          +  F  
Sbjct: 1151 QGRLSDARSVSRSPDANYLASV----ERNVSVRLWDGSICEAEQ---TSPGRGASVSFLS 1203

Query: 266  -SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
             S +G   L+ V    +M +++ D     T  LT+        ++SPDS  IV       
Sbjct: 1204 CSPDGT-LLLCVSTGASMQLWTTD--GVCTHTLTHPTKKVKFVTFSPDSKTIV----SGA 1256

Query: 325  KEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            ++ + V           +    E      ++SP G  +A     G    + +        
Sbjct: 1257 QDTVCVWDVETGRLLHTLKHYGEEGIIRVIFSPDGTTLA----GGSVNTLQLWDSVTGSS 1312

Query: 384  RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            +   E  ++    +SP G  L     +       ++ +++    +  I++P
Sbjct: 1313 KNSFEGFSIHDAYFSPDGEFLAAFSLQT------IFLLNIATDVQQTIDSP 1357



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 64/227 (28%), Gaps = 24/227 (10%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              +  +  +   G          D  +F   FSP+   +            V   D   +
Sbjct: 926  SGRVQMWDLATGGCKRVLEEGDEDHEVFAVAFSPDGTTLTTVAKSA-----VRFWDVTTE 980

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS----NATERLTNTLFI 303
               K +      I A  FS +G    ++        I   D          E +T+    
Sbjct: 981  TCKKTLDFPDGSISAAAFSLDGACLAVAS----GGAICLWDTAGMVCDKTLEDVTDYG-- 1034

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              S + SPD   +   +DR     + V        K+             +SP    +A 
Sbjct: 1035 VASIALSPDGKLLAVCTDRG----VQVWDIAAGVVKQQLPKSPEDVQSVAFSPDSKSLAL 1090

Query: 364  TKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              ++       +   KD + E+    D       ++  GR +  +  
Sbjct: 1091 GSWTQT----AIWDFKDVTFEQKSNGDYFRPFSAFTADGRFVALNSY 1133



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 79/256 (30%), Gaps = 32/256 (12%)

Query: 205  YLTPSRDQILFEP--------RFSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIG 254
            ++   R  I   P          SP +  V   +       I  V  +    D   +   
Sbjct: 844  FVRRHRTTIEQYPIQTYGTALALSPTRSHVRNMFWKERLSFIESVQGVGDAWDACLQAFE 903

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSP 311
            +    + +  FS + K  ++       + ++  DL +   +R+      +       +SP
Sbjct: 904  SPTFQLPSVAFSPDKKVLVLVTS--GRVQMW--DLATGGCKRVLEEGDEDHEVFAVAFSP 959

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            D + +   +    K  +          K+     + S     +S  G  +A         
Sbjct: 960  DGTTLTTVA----KSAVRFWDVTTETCKKTLDFPDGSISAAAFSLDGACLAVAS----GG 1011

Query: 372  AIGVMKKDGSQ-ERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            AI +    G   ++ L  V D  + +   SP G+ L     +    G +++ I      +
Sbjct: 1012 AICLWDTAGMVCDKTLEDVTDYGVASIALSPDGKLLAVCTDR----GVQVWDIAAGVVKQ 1067

Query: 429  TLINTPAYASDPQWVG 444
             L  +P       +  
Sbjct: 1068 QLPKSPEDVQSVAFSP 1083



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 77/230 (33%), Gaps = 47/230 (20%)

Query: 130  LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
            +WDV+  + +   K +                I + I    G           + ++G  
Sbjct: 1262 VWDVETGRLLHTLKHYGEEG------------IIRVIFSPDG-----------TTLAGGS 1298

Query: 190  KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             N+L + D    + +         + +  FSP+ + +A  +        ++L++   D  
Sbjct: 1299 VNTLQLWDSVTGSSKNSFEGFS--IHDAYFSPDGEFLAAFSLQT-----IFLLNIATDVQ 1351

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---TERLTNTLFINIS 306
                   ++ I+   FS +  + L S+  D  + ++  D  +     T +L     I+  
Sbjct: 1352 QTIDSPHQNDIIEAAFSPD-SKILASLSVDGTLCLW--DTATGTCTHTFKL-EEEAID-E 1406

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             S+S D   +           L  +  +      ++    +S  D   SP
Sbjct: 1407 LSFSEDGKFLW--------TNLGRLNLDDGKF-LLTDLGRSSADDGSVSP 1447


>gi|323344506|ref|ZP_08084731.1| OmpA family protein [Prevotella oralis ATCC 33269]
 gi|323094633|gb|EFZ37209.1| OmpA family protein [Prevotella oralis ATCC 33269]
          Length = 688

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 81/236 (34%), Gaps = 43/236 (18%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNG-KRALISVQKDEA-------------MDIYSVD 288
            +R       I N R    +P  S +   +   +  ++EA              DI+  +
Sbjct: 148 GSRYTVKRMDIFNSRRDDYSPVLSGDQFDQLYFTSTRNEANGDELSGITGTKAADIFVSE 207

Query: 289 LQSN----ATERLT---NTLFINISASYSPDSSQIV---FESDREGKEQLYVMQSN---- 334
                     E +T   NT +   + + SPD   +      +D        +  S+    
Sbjct: 208 RDDKGKWSKPEPVTGGLNTPYDEGACALSPDQRTMYLTQCTTDAAYPRYAQIATSDRTDA 267

Query: 335 ---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKD----GSQER 384
               S+  +I++D  +SY  P  SP G+ + FT           I  ++      G  E 
Sbjct: 268 AWGKSNALQITKDTLSSYAHPAISPDGEWLYFTSDMPGGLGGLDIWRVRITSHGLGGVEN 327

Query: 385 L---LVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETLINTPAY 436
           L   +    N + PT+ P+G    FS     G  G  +Y   ++   +  +  P Y
Sbjct: 328 LGEPINTPGNEEFPTFRPNGDF-YFSSDGHPGMGGLDIYIAMVDEHGKYRLFHPGY 382



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 59/182 (32%), Gaps = 27/182 (14%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRD------G-ANIRYLTPSRDQILFEPRFSPNQQKV 226
           + R +++++            +   D      G +N   +T         P  SP+ + +
Sbjct: 238 DQRTMYLTQCTTDAAYPRYAQIATSDRTDAAWGKSNALQITKDTLSSYAHPAISPDGEWL 297

Query: 227 AYATYDDEDILRVYLMDTRIDRAP----KRIG---NFRSMILAPRFSSNGKRALISVQKD 279
            + +     +  + +   RI        + +G   N       P F  NG     S    
Sbjct: 298 YFTSDMPGGLGGLDIWRVRITSHGLGGVENLGEPINTPGNEEFPTFRPNGDF-YFSSDGH 356

Query: 280 ---EAMDIYSVDLQSNATERLT------NTLFINISASYSPDSSQIVFESDRE---GKEQ 327
                +DIY   +  +   RL       N+   +   ++    ++  F S+R    G + 
Sbjct: 357 PGMGGLDIYIAMVDEHGKYRLFHPGYPLNSQGDDFGMTFEGPYNRGFFASNRNDGRGWDH 416

Query: 328 LY 329
           +Y
Sbjct: 417 IY 418


>gi|298375916|ref|ZP_06985872.1| dipeptidyl peptidase IV [Bacteroides sp. 3_1_19]
 gi|298266953|gb|EFI08610.1| dipeptidyl peptidase IV [Bacteroides sp. 3_1_19]
          Length = 744

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 53/155 (34%), Gaps = 35/155 (22%)

Query: 308 SYSPDSS--------QIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQG 358
           S+S D+         Q V+  D  G    +V+       +++ +   E+S     +SP G
Sbjct: 102 SWSADNKKVLIYNNTQRVWRYDTRG--DYWVLNLKDGALRQLGKGMPESSMMFAKFSPDG 159

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL------------------QAPTWSPS 400
             +A+   +     I V   D  +   L +D +                       WSP 
Sbjct: 160 TRVAYVSNN----NIYVEDIDSGKITQLTKDGSDTIVNGTFDWVYEEEFSCRDGFRWSPD 215

Query: 401 GRSLIFS-RKKDGDTGSKLYSIDLNGRNETLINTP 434
           G+ + +      G     + + +++     +I+ P
Sbjct: 216 GKHIAYWQSDTKGTGVFDIIN-NVDSIYAKVIHFP 249



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 101/322 (31%), Gaps = 73/322 (22%)

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           ++ V     +    V++ +DGA  +      +  +   +FSP+  +VAY + ++     +
Sbjct: 116 TQRVWRYDTRGDYWVLNLKDGALRQLGKGMPESSMMFAKFSPDGTRVAYVSNNN-----I 170

Query: 240 YLMDTRIDRAPKRIGNFRSMIL----------------APRFSSNGKRALISVQKDEAMD 283
           Y+ D    +  +   +    I+                  R+S +GK         +   
Sbjct: 171 YVEDIDSGKITQLTKDGSDTIVNGTFDWVYEEEFSCRDGFRWSPDGKHIAYWQSDTKGTG 230

Query: 284 IYSV--DLQSNATERL-------------------------TNTLFINISAS-------- 308
           ++ +  ++ S   + +                         T  + I             
Sbjct: 231 VFDIINNVDSIYAKVIHFPYPKAGTTNSAVKVGYVSSTGGNTTWIAIPGDPRNNYLPRME 290

Query: 309 YSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLI 361
           + P+S ++ F    +  +   ++++ + + +    I  D +A++ D      W       
Sbjct: 291 FIPESDEL-FIQQLNRPQNTNKVWIAKISDNSLNNIFTDTDAAWLDTNDNIQWLKDNRYF 349

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-----SLIFSRKKDGDTGS 416
            +         +  + +DG + + + +         SP G       + F    D  T  
Sbjct: 350 TWESERSGWRHLYRISRDGKEIQPITKG---DFDYISPVGTDLQKGWVYFIASPDNFTQR 406

Query: 417 KLYSIDLNGRNETLINTPAYAS 438
            LY     G  E    +P   S
Sbjct: 407 YLYRAKAFGNGEVERVSPMEQS 428


>gi|255038084|ref|YP_003088705.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254950840|gb|ACT95540.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 648

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 69/189 (36%), Gaps = 31/189 (16%)

Query: 217 PRFSPNQQKVAYATYDDED----------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           P FSP+ + + +A  +              +   +       AP  I +  +   +P FS
Sbjct: 205 PAFSPDGKTLVFARSNTGKKKDKSPDVDLYMSRNINGQWSAPAPLPINDSLAWDGSPAFS 264

Query: 267 SNGKRALISVQKD---EAMDIYS--VDLQSNATERL-----TNTLFINISASYSPDSSQI 316
            +GK    +  +      +DIY   +D     +  +      NT   ++   Y  +  ++
Sbjct: 265 RDGKTLYFASNRAGGVGGIDIYRTNMDASGRFSRPVNMGRDINTPGDDMFP-YVAEGGKL 323

Query: 317 VFESDREGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQGDL-IAFTKFSGEKFAI 373
            F SD  G   L  +    + + +  I+ +   +   P  SPQ D  + F +   + F  
Sbjct: 324 YFASD--GHPGLGKLDLFSATRTQGVITIE---NLGLPFNSPQDDFGLVFYQNLKKGF-- 376

Query: 374 GVMKKDGSQ 382
               +DG +
Sbjct: 377 FASNRDGGK 385



 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 70/201 (34%), Gaps = 30/201 (14%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ-------SNATE-----R 296
             + +    +   +P FS +GK  + +          S D+        +          
Sbjct: 191 FSQEVFEPEAHDASPAFSPDGKTLVFARSNTGKKKDKSPDVDLYMSRNINGQWSAPAPLP 250

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQ---LYV--MQSNGSDQKRISQDKEASYFD 351
           + ++L  + S ++S D   + F S+R G      +Y   M ++G   + ++  ++ +   
Sbjct: 251 INDSLAWDGSPAFSRDGKTLYFASNRAGGVGGIDIYRTNMDASGRFSRPVNMGRDINTPG 310

Query: 352 PVWSP---QGDLIAFTKF-SGEKFAIGVMKKDGSQERLLVEDSN--LQAP------TWSP 399
               P   +G  + F          + +     +Q  + +E+      +P       +  
Sbjct: 311 DDMFPYVAEGGKLYFASDGHPGLGKLDLFSATRTQGVITIENLGLPFNSPQDDFGLVFYQ 370

Query: 400 SGRSLIFSRKKDGDTG-SKLY 419
           + +   F+  +DG  G   +Y
Sbjct: 371 NLKKGFFASNRDGGKGDDDIY 391



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 73/225 (32%), Gaps = 35/225 (15%)

Query: 133 VKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQ-SITGEKGDFNS---RILFVSESVV 185
             + +Q++G       S P + +      S ++++         F+     ++F   +  
Sbjct: 163 TNNGQQMLGLYKINIASDPGNTQGNPVLFSQEVFEPEAHDASPAFSPDGKTLVFARSNTG 222

Query: 186 SGIIKNS----LCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
               K+         + +G   A               P FS + + + +A+     +  
Sbjct: 223 KKKDKSPDVDLYMSRNINGQWSAPAPLPINDSLAWDGSPAFSRDGKTLYFASNRAGGVGG 282

Query: 239 VYLMDTRIDRAPK--------RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           + +  T +D + +        R  N     + P  +  G +   +   D    +  +DL 
Sbjct: 283 IDIYRTNMDASGRFSRPVNMGRDINTPGDDMFPYVA-EGGKLYFAS--DGHPGLGKLDLF 339

Query: 291 SNATER--LT--------NTLFINISASYSPDSSQIVFESDREGK 325
           S    +  +T        N+   +    +  +  +  F S+R+G 
Sbjct: 340 SATRTQGVITIENLGLPFNSPQDDFGLVFYQNLKKGFFASNRDGG 384


>gi|302543026|ref|ZP_07295368.1| tricorn protease [Streptomyces hygroscopicus ATCC 53653]
 gi|302460644|gb|EFL23737.1| tricorn protease [Streptomyces himastatinicus ATCC 53653]
          Length = 1121

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 53/298 (17%), Positives = 103/298 (34%), Gaps = 37/298 (12%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA----- 229
            RI F+S+    G     L     DG ++R  T   D        S +  +V Y      
Sbjct: 236 GRIAFLSDHEGVGN----LYSCLPDGTDLRRHTDHDDFYARHA--STDGSRVVYQCAGEL 289

Query: 230 -------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                     +   LRV L   R  R P ++    S + +    + G+ + + V+     
Sbjct: 290 WLVDDLGPDAEPRRLRVRLGGARAGRRPYQV-PAASHVDSLSVDATGRASAVCVRGS--- 345

Query: 283 DIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVM----QSNGSD 337
            +Y +  +      L +T  + +        S ++ + +D EG++ + +      S   +
Sbjct: 346 -LYWLTHRDGPARTLADTPGVRVRMPEILGSSGRVAYVTDAEGEDAIEIAYLPRASETGE 404

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-- 395
            +R++  +     +   SP GD +A     G    +        +   L+   N      
Sbjct: 405 PRRLAAGRLGRVHELEPSPDGDRLAVAANDGRLLLVDTSADGDGEVTELIRSLNGPVADL 464

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGFM 446
            +SP    L +S    G T   +    L  R    + +       P + SD +++ F+
Sbjct: 465 AFSPDSTWLAWSHPGIGRTLRSIKIARLADRTIVDVTSGRFEDEEPVFTSDGRYLAFL 522



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 59/185 (31%), Gaps = 35/185 (18%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN------I 305
           R+   R+ +  PRFS +G     +  +    +I+   +    T RLT     +       
Sbjct: 50  RLTVDRTRVGHPRFSPDGSHIAYTNWRSLDPEIHLTPVDGGPTRRLTYWGSEDARVCGWT 109

Query: 306 SASYSPDSSQIVFESDREGKEQ-----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                PD    +      G+        Y + ++GS   R+     A        P  D 
Sbjct: 110 PP--DPDGVSDILAVSSHGQPFSHFSWAYSLPTDGSPGSRLPWGPVADIAVTDRIPGAD- 166

Query: 361 IAFTKFSGEKFAIGVMKKDGSQER-----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                        GV  +DG+ +R     LL      +  TW          R + G TG
Sbjct: 167 ------QDRADHDGVADQDGAADRERRTLLLTGKPPHEPATW---------KRYRGGATG 211

Query: 416 SKLYS 420
            +L+ 
Sbjct: 212 -RLWL 215



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 13/129 (10%)

Query: 269 GKRALISVQKDEAMDIYSVDLQS---NATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           G     + + D  + +  +  +        RLT          +SPD S I + + R   
Sbjct: 22  GDLLCFAAEDD--LWVAPLTARGEPPGRAWRLTVDRTRVGHPRFSPDGSHIAYTNWRSLD 79

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQG-DLIAFTKFSGEKFA----IGVMK 377
            ++++   +G   +R++           W+   P G   I      G+ F+       + 
Sbjct: 80  PEIHLTPVDGGPTRRLTYWGSEDARVCGWTPPDPDGVSDILAVSSHGQPFSHFSWAYSLP 139

Query: 378 KDGSQERLL 386
            DGS    L
Sbjct: 140 TDGSPGSRL 148



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 66/248 (26%), Gaps = 55/248 (22%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-------PRFSSN 268
            PRFSP+   +AY  +   D     +  T +D  P R   +     A       P    +
Sbjct: 60  HPRFSPDGSHIAYTNWRSLDP---EIHLTPVDGGPTRRLTYWGSEDARVCGWTPPD--PD 114

Query: 269 GKRALISVQKDEAM-----DIYSVDLQSNATERLTNTLFIN--------------ISASY 309
           G   +++V             YS+    +   RL      +                   
Sbjct: 115 GVSDILAVSSHGQPFSHFSWAYSLPTDGSPGSRLPWGPVADIAVTDRIPGADQDRADHDG 174

Query: 310 SPDSSQIVFESDREGKEQLYV----------MQSNGSDQKRISQDKEASYFDPVWSPQ-- 357
             D        DRE +  L             +  G    R+         +        
Sbjct: 175 VADQDGAA---DRERRTLLLTGKPPHEPATWKRYRGGATGRLWLGGTRLLPELDGHLDSV 231

Query: 358 ---GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
              G  IAF         +     DG+  R   +  +  A   S  G  +++        
Sbjct: 232 MAVGGRIAFLSDHEGVGNLYSCLPDGTDLRRHTDHDDFYARHASTDGSRVVY------QC 285

Query: 415 GSKLYSID 422
             +L+ +D
Sbjct: 286 AGELWLVD 293



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           G   RL V+ + +  P +SP G  + ++  +  D   +++   ++G     + 
Sbjct: 46  GRAWRLTVDRTRVGHPRFSPDGSHIAYTNWRSLD--PEIHLTPVDGGPTRRLT 96



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 36/99 (36%), Gaps = 4/99 (4%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D DG  +  L  S +  + +  FSP+   +A++       LR   +    DR    + +
Sbjct: 444 ADGDGE-VTELIRSLNGPVADLAFSPDSTWLAWSHPGIGRTLRSIKIARLADRTIVDVTS 502

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            R     P F+S+G+       +         D+ +   
Sbjct: 503 GRFEDEEPVFTSDGRYLAFLSWRGFDP---VYDVHTGDL 538


>gi|295660381|ref|XP_002790747.1| WD repeat-containing protein [Paracoccidioides brasiliensis Pb01]
 gi|226281300|gb|EEH36866.1| WD repeat-containing protein [Paracoccidioides brasiliensis Pb01]
          Length = 628

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 63/197 (31%), Gaps = 17/197 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  K+A           V + D        R+ +    +    +S +  +  IS   
Sbjct: 312 FSHDGTKLA----TAGRENLVIIYDVATFAVIHRLTDHGGSVAYATWSPDDTKL-ISCSH 366

Query: 279 DEAMDIYSV--DLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           D    ++ V   LQ+     LT  +      SA+++PDS   V     + + QL +    
Sbjct: 367 DYKARLWDVEHPLQTGRCI-LTIDHHHEPVTSAAWAPDSESFV-TGSLDSQSQLCLWSVV 424

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQ 393
           G               D   SP G  +           + V   +   +E  +    +L 
Sbjct: 425 GESL--YKWSGNYRVRDCSISPDGRRLVAISTEKS---VYVYNFETRVEEYSMTLKLDLT 479

Query: 394 APTWSPSGRSLIFSRKK 410
               S   R ++ S  +
Sbjct: 480 CVNISRDSRYMLLSTSE 496



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/135 (11%), Positives = 47/135 (34%), Gaps = 2/135 (1%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   +N + + D     + +        +    +SP+  K+   ++D +  L       +
Sbjct: 321 TAGRENLVIIYDVATFAVIHRLTDHGGSVAYATWSPDDTKLISCSHDYKARLWDVEHPLQ 380

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R    I +    + +  ++ + +   ++   D    +    +   +  +  +  +   
Sbjct: 381 TGRCILTIDHHHEPVTSAAWAPDSES-FVTGSLDSQSQLCLWSVVGESLYKW-SGNYRVR 438

Query: 306 SASYSPDSSQIVFES 320
             S SPD  ++V  S
Sbjct: 439 DCSISPDGRRLVAIS 453


>gi|288933687|ref|YP_003437746.1| oligogalacturonide lyase [Klebsiella variicola At-22]
 gi|288888416|gb|ADC56734.1| Oligogalacturonide lyase [Klebsiella variicola At-22]
          Length = 391

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 86/250 (34%), Gaps = 27/250 (10%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F  +   + +A   D      YL++     A +              S + K 
Sbjct: 36  NYFYQKCFFNDGSHLLFAGEFDGH-WNYYLLNIASAEAIQLTEGAGDNTFGGFLSPDDKS 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTL----------------FINISAS-YSPDSS 314
                     +++    L      R+++                   I I+ S ++P + 
Sbjct: 95  LYYVKNDRTLLEVNLTTLAEREVYRVSDDWVGYGTWVANSDCSKLVGIEIAKSDWTPLND 154

Query: 315 QIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF- 371
             +F           +++ +  S + ++  +++     P++ P     +AF         
Sbjct: 155 WQIFHDFFHKGPHCRLLRVDLHSGESQVIHEEKIWLGHPIYRPFDDHTVAFCHEGPHDLV 214

Query: 372 --AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSID-LNG 425
              + ++ +DGS  R +   +  ++ T   W P G +LI+     G  G  +Y  D  +G
Sbjct: 215 DARMWLVNEDGSHVRKVKTHAPGESCTHEFWVPDGSALIYVSYLKGQQGRTIYRFDPESG 274

Query: 426 RNETLINTPA 435
            NE L+  PA
Sbjct: 275 VNEALMTMPA 284



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 65/190 (34%), Gaps = 38/190 (20%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG+++R + T +  +      + P+   + Y +
Sbjct: 197 PFDDHTVAFCHEGPHDLVDARMWLVNEDGSHVRKVKTHAPGESCTHEFWVPDGSALIYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---------------I 274
           Y      R +Y  D         +       L   F  +G   +                
Sbjct: 257 YLKGQQGRTIYRFDPESGVNEALMTMPACSHLMSNF--DGTLLVGDGSGTPVDVKDTGGY 314

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFES 320
           S+  D    +Y  ++      R+      + S               S++PD S I+F S
Sbjct: 315 SIDND--PYLYVFNVAQKRYFRVARH---DTSWATVANSRQVTHPHPSFTPDDSAILFSS 369

Query: 321 DREGKEQLYV 330
           D++GK  +Y+
Sbjct: 370 DKDGKPAIYI 379



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 70/235 (29%), Gaps = 39/235 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           ++P      +  +  +      L         + I   +  +  P +   +        +
Sbjct: 149 WTPLNDWQIFHDFFHKGPHCRLLRVDLHSGESQVIHEEKIWLGHPIYRPFDDHTVAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ V+   +   ++ T+    +     + PD S +++ S  +G++   +Y 
Sbjct: 209 GPHDLVDARMWLVNEDGSHVRKVKTHAPGESCTHEFWVPDGSALIYVSYLKGQQGRTIYR 268

Query: 331 MQSNGS------------------DQKRISQDKEASYFD----PVWSPQGDLIAFTKFSG 368
                                   D   +  D   +  D      +S   D   +     
Sbjct: 269 FDPESGVNEALMTMPACSHLMSNFDGTLLVGDGSGTPVDVKDTGGYSIDNDPYLYVFNVA 328

Query: 369 EKFAIGVMKKDGS-----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +K    V + D S       R +        P+++P   +++FS  KDG     +
Sbjct: 329 QKRYFRVARHDTSWATVANSRQVTHP----HPSFTPDDSAILFSSDKDGKPAIYI 379



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 37/109 (33%), Gaps = 6/109 (5%)

Query: 288 DLQSNAT-ERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           D  + A   RLT               +  D S ++F  + +G    Y++    ++  ++
Sbjct: 16  DPDTGAEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHWNYYLLNIASAEAIQL 75

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++    + F    SP    + + K       + +      +   + +D 
Sbjct: 76  TEGAGDNTFGGFLSPDDKSLYYVKNDRTLLEVNLTTLAEREVYRVSDDW 124


>gi|221200335|ref|ZP_03573377.1| coagulation factor 5/8 type domain protein [Burkholderia
           multivorans CGD2M]
 gi|221206014|ref|ZP_03579028.1| coagulation factor 5/8 type domain protein [Burkholderia
           multivorans CGD2]
 gi|221174026|gb|EEE06459.1| coagulation factor 5/8 type domain protein [Burkholderia
           multivorans CGD2]
 gi|221179676|gb|EEE12081.1| coagulation factor 5/8 type domain protein [Burkholderia
           multivorans CGD2M]
          Length = 471

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 71/213 (33%), Gaps = 14/213 (6%)

Query: 225 KVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDE 280
           K+ Y +Y    D      +         ++      I  P    FS +GK       ++ 
Sbjct: 47  KLVYHSYVKYGDGTSQLFLYDFSAHTLTQLSKSTWGITDPMNGVFSPDGKWLAFMGIRNG 106

Query: 281 AMDIYSVDLQSNATER-LTNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           A +++ + L +      +T++     N    +SPD   +VF+ + + K+      S G  
Sbjct: 107 AWNVFMLQLGAGTPPVDMTHSTGATRNEDPKFSPDGKTLVFKQNGDVKQGTLSFTSAGPV 166

Query: 338 QKRISQDKEAS----YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
              I     A     Y  P  SP    + +   +G    +                + LQ
Sbjct: 167 FTSIVSLTNAPSGAEYSMPYLSPDATAVYYATGAGANMGLMKRTIATGATATFDHPAGLQ 226

Query: 394 --APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              P     G  + ++R KD     ++Y+   +
Sbjct: 227 TYYPMVRADG-MVFYARWKDSGGLDQIYAKSAD 258



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 72/227 (31%), Gaps = 12/227 (5%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI-LFEPRFSPNQQKVAY- 228
           G F+    +++   +     N   +    G     +T S       +P+FSP+ + + + 
Sbjct: 89  GVFSPDGKWLAFMGIRNGAWNVFMLQLGAGTPPVDMTHSTGATRNEDPKFSPDGKTLVFK 148

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQKDEAMDIYS 286
              D +     +     +  +   + N  S      P  S +      +      M +  
Sbjct: 149 QNGDVKQGTLSFTSAGPVFTSIVSLTNAPSGAEYSMPYLSPDATAVYYATGAGANMGLMK 208

Query: 287 VDLQSNATERLTNTLFINI-SASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRIS 342
             + + AT    +   +         D   +VF +   D  G +Q+Y   ++ S      
Sbjct: 209 RTIATGATATFDHPAGLQTYYPMVRADG--MVFYARWKDSGGLDQIYAKSADPSSTPSAL 266

Query: 343 QDKEASYFDPVWSP-QG-DLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
              +    +   +P  G + + F+  +   + + V      +   L 
Sbjct: 267 SINDCVSNNSDPAPVNGTNYLFFSSTTAGGYQLYVGDVTTGKRWSLS 313


>gi|218245588|ref|YP_002370959.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Cyanothece sp. PCC 8801]
 gi|218166066|gb|ACK64803.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Cyanothece sp. PCC 8801]
          Length = 644

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 50/129 (38%), Gaps = 15/129 (11%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-------GEKFAIGVMKK 378
             L  +  N      +    +  Y  P  SP G  + +  ++       G +  +  ++ 
Sbjct: 149 NTLVSIDLNSGKINTLVSGCD-FYSSPRLSPDGTQLTWISWNHPNLPWDGSQLWLATVQA 207

Query: 379 DGS--QERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           DGS  Q RL+   +N  +  P WSP G+ L FS  + G     LY     G  + L    
Sbjct: 208 DGSLDQVRLIAGGTNESICEPKWSPDGQ-LYFSSDRRG--WWNLYRYTQKGAIDPLFPLN 264

Query: 435 AYASDPQWV 443
           A  S P WV
Sbjct: 265 AEFSYPHWV 273



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 22/171 (12%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-----EQLY-- 329
           +K+    + S+DL S     L +      S   SPD +Q+ + S           QL+  
Sbjct: 144 EKEPENTLVSIDLNSGKINTLVSGCDFYSSPRLSPDGTQLTWISWNHPNLPWDGSQLWLA 203

Query: 330 VMQSNGS--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            +Q++GS    + I+     S  +P WSP G  + F+      + +    + G+ + L  
Sbjct: 204 TVQADGSLDQVRLIAGGTNESICEPKWSPDGQ-LYFSSDRRGWWNLYRYTQKGAIDPLFP 262

Query: 388 EDSNLQAPTW----SPSG----RSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            ++    P W    S         +I S  +DG    + Y   L+ + + L
Sbjct: 263 LNAEFSYPHWVFGLSNYSFISESHVICSFNQDG----QWYLASLDTQQKQL 309



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 69/205 (33%), Gaps = 36/205 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQII--GKKFFSSPASWR---------------KIAH 156
           G+V +       V  R+ +      +I  G  +F + +  R               +  +
Sbjct: 60  GQVTEMTPQPFNVRTRVHEYGGGAFLIVQGTLYFINFSDQRLYQKLPNQDPTPLTPEGTY 119

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQIL 214
             +D I   +         R++ V E    G  +  N+L  +D +   I  L    D   
Sbjct: 120 RYADLILDPLRH-------RLICVGEDHSQGEKEPENTLVSIDLNSGKINTLVSGCD-FY 171

Query: 215 FEPRFSPNQQKVAYATYDDEDILR-------VYLMDTRIDRAPKRIGNFRSMILA-PRFS 266
             PR SP+  ++ + +++  ++           +         + I    +  +  P++S
Sbjct: 172 SSPRLSPDGTQLTWISWNHPNLPWDGSQLWLATVQADGSLDQVRLIAGGTNESICEPKWS 231

Query: 267 SNGKRALISVQKDEAMDIYSVDLQS 291
            +G +   S  +    ++Y    + 
Sbjct: 232 PDG-QLYFSSDRRGWWNLYRYTQKG 255


>gi|297516161|ref|ZP_06934547.1| hypothetical protein EcolOP_00905 [Escherichia coli OP50]
          Length = 253

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 103 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 162

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 163 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 218

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 219 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 252



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 141 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 200

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 201 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 252



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 154 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 211

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 212 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 240


>gi|111221198|ref|YP_711992.1| hypothetical protein FRAAL1754 [Frankia alni ACN14a]
 gi|111148730|emb|CAJ60406.1| hypothetical protein FRAAL1754 [Frankia alni ACN14a]
          Length = 520

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 43/310 (13%), Positives = 102/310 (32%), Gaps = 40/310 (12%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWDV D            P+  R I + +           KG ++       +++ +  
Sbjct: 237 RLWDVAD------------PSHARPIGNPL-------TGHTKGVWSVVFAPDGQTLATAS 277

Query: 189 IKNSLCVMD-RDGANIRYL---TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
              ++ + D  D ++ R +        + ++   F+P+ Q +A A+ D    L      +
Sbjct: 278 ADQTVRLWDVADPSHARPIGNPLTGHTKGVWPVVFAPDGQTLATASTDQTVRLWDVADPS 337

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATE--RLTNTL 301
                   +      + +  F+ +G+    +   D+ + ++   D          LT   
Sbjct: 338 HARPIGNPLTGHTKGVESVAFAPDGQTLA-TASNDQTVRLWDVADPSHARPIGNPLTGHT 396

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQ 357
               S +++PD   +   S+    + + +         R          +     V++P 
Sbjct: 397 NRVRSVAFAPDGQTLATASN---DQTVRLWDVADPSHARPIGNPLTGHTSWVVSVVFAPD 453

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           G  +A            V     ++     L      + +  ++P G++L  +     D 
Sbjct: 454 GQTLATASVDQTVRLWDVADPSHARPIGNPLTGHTKGVWSVVFAPDGQTLATAST---DQ 510

Query: 415 GSKLYSIDLN 424
             +L+ +  +
Sbjct: 511 TVRLWDVWAD 520


>gi|284173978|ref|ZP_06387947.1| Tricorn protease (tri) [Sulfolobus solfataricus 98/2]
 gi|261603289|gb|ACX92892.1| peptidase S41 [Sulfolobus solfataricus 98/2]
          Length = 1008

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 49/116 (42%), Gaps = 4/116 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  +++  ++   K +L+V + +  + + I + +     +  W P  +  A+    G 
Sbjct: 368 SPDGKKVLLSNN---KLELWVYEIDNDNARLIDKSEYDLILEFDWHPNAEWFAYAFPEGY 424

Query: 370 -KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +I +   DG   R+        +P++ P GR L F   +  D  +     +L+
Sbjct: 425 YTQSIKLAHIDGKVVRITTPYGYDFSPSFDPDGRYLYFLAARHLDPTNDKVIFNLS 480



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 104/263 (39%), Gaps = 36/263 (13%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G  K  L +   DG        S D  +  P     +++V + + D E +  +Y +
Sbjct: 158 KGYKGGTKGELWIS-SDGGKTFEKFVSLDGNVSWPMIV--RERVYFLS-DHEGVGNLYSV 213

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D +  +  +R  NF         SS+GKR +       A DIY  D + ++  +L   L 
Sbjct: 214 DLK-GKDLRRHTNFTDYYCRNA-SSDGKRIVFQ----NAGDIYLYDPEKDSLTKLDINLP 267

Query: 303 INI---SASYSP----------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +       +            + + I   S    + ++++M+       ++ + +   Y
Sbjct: 268 TDRKKKQPKFVNVMEYMNEAVVNGNYIALVS----RGKVFLMRPWDGPSVQLGKKQGVKY 323

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                 P GD+I       ++  + ++ KDGS++ +  + S ++    SP G+ ++ S  
Sbjct: 324 RQIQVLPNGDVIGV----NDEDKLVILGKDGSEKVINKDFSRIERVKVSPDGKKVLLSNN 379

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           K      +L+  +++  N  LI+
Sbjct: 380 K-----LELWVYEIDNDNARLID 397



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 67/232 (28%), Gaps = 59/232 (25%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FS 266
            S   +   P+ SP+ +KVA++    +   +   +    D   +R+  F S       + 
Sbjct: 37  TSGLGVSTRPKISPSGRKVAFSVIWLKSGKQGGDIYVVEDGQARRVTYFGSRNSRVAGWI 96

Query: 267 SNGKRALISVQKD---EAMDIYSVDLQSNATERLTNT---------------LFINISAS 308
           S  +  +I+       +  + Y V++ +  TE+L                         +
Sbjct: 97  SEDEIIVITDFHTPFIQWTEAYKVNVNNGKTEKLPFGMLSNIVIKDDIIVIARGYQDLPN 156

Query: 309 Y-------------SPDSSQ---------------------IVFESDREGKEQLYVMQSN 334
           +             S D  +                     + F SD EG   LY +   
Sbjct: 157 WKGYKGGTKGELWISSDGGKTFEKFVSLDGNVSWPMIVRERVYFLSDHEGVGNLYSVDLK 216

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           G D +R        Y+    S  G  I F         I +   +      L
Sbjct: 217 GKDLRR--HTNFTDYYCRNASSDGKRIVFQNAGD----IYLYDPEKDSLTKL 262



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 58/199 (29%), Gaps = 40/199 (20%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDR 322
            +  G     +   D    ++ + L+     R+T+ L ++     SP   ++ F     +
Sbjct: 8   PDIRGDLISFTSDDD----VWLLSLKDMKPLRITSGLGVSTRPKISPSGRKVAFSVIWLK 63

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVM 376
            GK+   +        +R++     +     W  + ++I  T F        E + + V 
Sbjct: 64  SGKQGGDIYVVEDGQARRVTYFGSRNSRVAGWISEDEIIVITDFHTPFIQWTEAYKVNVN 123

Query: 377 KKDGSQERLLV---------------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              G  E+L                        P W            K G  G    S 
Sbjct: 124 N--GKTEKLPFGMLSNIVIKDDIIVIARGYQDLPNW---------KGYKGGTKGELWISS 172

Query: 422 DLNGRNETLINTPAYASDP 440
           D     E  ++     S P
Sbjct: 173 DGGKTFEKFVSLDGNVSWP 191



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 56/145 (38%), Gaps = 6/145 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +  +  V+    ++ L ++ +DG+  + +     +I    + SP+ +KV  +    E  L
Sbjct: 328 VLPNGDVIGVNDEDKLVILGKDGS-EKVINKDFSRIERV-KVSPDGKKVLLSNNKLE--L 383

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            VY +D    R   +  +   +IL   +  N +    +  +        +        R+
Sbjct: 384 WVYEIDNDNARLIDK--SEYDLILEFDWHPNAEWFAYAFPEGYYTQSIKLAHIDGKVVRI 441

Query: 298 TNTLFINISASYSPDSSQIVFESDR 322
           T     + S S+ PD   + F + R
Sbjct: 442 TTPYGYDFSPSFDPDGRYLYFLAAR 466



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 46/227 (20%), Positives = 85/227 (37%), Gaps = 29/227 (12%)

Query: 221 PN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-- 276
           P+     +++ + DD     V+L+  + D  P RI +   +   P+ S +G++   SV  
Sbjct: 8   PDIRGDLISFTSDDD-----VWLLSLK-DMKPLRITSGLGVSTRPKISPSGRKVAFSVIW 61

Query: 277 --QKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV---FESDREGKEQLYV 330
                +  DIY V  +     R+T     N   A +  +   IV   F +      + Y 
Sbjct: 62  LKSGKQGGDIYVV--EDGQARRVTYFGSRNSRVAGWISEDEIIVITDFHTPFIQWTEAYK 119

Query: 331 MQSNGSDQKRISQD---KEASYFDPVWSPQG--DLIAFTKFSGEKFAIGVMKKDGSQ--E 383
           +  N    +++            D +   +G  DL  +  + G       +  DG +  E
Sbjct: 120 VNVNNGKTEKLPFGMLSNIVIKDDIIVIARGYQDLPNWKGYKGGTKGELWISSDGGKTFE 179

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           + +  D N+  P        + F    +G     LYS+DL G++   
Sbjct: 180 KFVSLDGNVSWPMIVR--ERVYFLSDHEG--VGNLYSVDLKGKDLRR 222


>gi|48477886|ref|YP_023592.1| tricorn protease [Picrophilus torridus DSM 9790]
 gi|48430534|gb|AAT43399.1| tricorn protease [Picrophilus torridus DSM 9790]
          Length = 1018

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/306 (16%), Positives = 103/306 (33%), Gaps = 60/306 (19%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++RI F+S+   +      +   D +G NI+  T   +  +   R   + + + +    D
Sbjct: 198 SNRIYFISDHEGTAN----IYSCDLNGKNIKKETDFNEYYVRNAR--SDGKNIVFQMAGD 251

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------SSNGKRA-------LISVQKDE 280
             ++   +    I+    ++ + +  I    F      S +GKR        + S     
Sbjct: 252 LYLMGNGIKKLDINIKAPKLKSLQKSISMDDFITSYDISPDGKRFLAVSRGQVYSSGISG 311

Query: 281 AMDI-------------------YSVDLQSNAT------ERLTN----TLFINISASYSP 311
                                  Y  + +           RL N       I  S   SP
Sbjct: 312 GPVFNIKKLKNQVSVFSKDCIVSYIYNEREGKILFHDFNGRLINEKDFNDGIIRSMVISP 371

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D  +I   ++R     LY++  +  + K++ + +  +  D  WS    L+A++    + F
Sbjct: 372 DGKKIAIGNNR---FSLYILD-DQLNLKKVDESESGAILDFSWSGDSRLLAYSYPEKKYF 427

Query: 372 -------AIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  +I +    + S  ++        +P++S     L +  K+  D        DL
Sbjct: 428 LSDVGSSSIRIYDTVNDSIHQVTTPGYIDFSPSFSSDNSYLFYLSKRSLDPVQDELVFDL 487

Query: 424 NGRNET 429
             +N T
Sbjct: 488 GYQNIT 493



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 80/230 (34%), Gaps = 42/230 (18%)

Query: 228 YATYDDEDILRVYLMDTR------IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-- 279
           +   D  D L V++ D          +   R+     ++  PR S +       V     
Sbjct: 5   FMYPDIRDDLLVFVNDDDLWEYNISTKEISRLTYNMGVVTMPRISPDKMGVYFRVMTGKS 64

Query: 280 -EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----DREGKEQLYVMQSN 334
            ++ DIY V L +    R+T     + S        + ++ S     R+G   +      
Sbjct: 65  ADSSDIYYVSLNTGEISRVTYLQGRSTS--------RRMYTSVAGFTRDGNPVISTDAYY 116

Query: 335 GSDQKRISQDKEASYFDPVWSP--------QGDLIA--------FTKFSGEKFAIGVMKK 378
                 + + K  + +     P         G LI         +  + G      +   
Sbjct: 117 PFSSPMLYELKNNNLYPMNLGPAMEIIYNGDGILIGRNTVDMPHWKHYRGGTRGKILYSD 176

Query: 379 DGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           +G   +++V+ DSN+ +P    +   + F    +G   + +YS DLNG+N
Sbjct: 177 NGRDFKIIVDLDSNVNSPMIVSN--RIYFISDHEGT--ANIYSCDLNGKN 222



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 76/196 (38%), Gaps = 21/196 (10%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG-- 200
            +  SP   R +A      +Y S       FN + L    SV S     S    +R+G  
Sbjct: 286 SYDISPDGKRFLA-VSRGQVYSSGISGGPVFNIKKLKNQVSVFSKDCIVSYIYNEREGKI 344

Query: 201 ----ANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
                N R +      D I+     SP+ +K+A       +   +Y++D +++   K   
Sbjct: 345 LFHDFNGRLINEKDFNDGIIRSMVISPDGKKIAI----GNNRFSLYILDDQLNLK-KVDE 399

Query: 255 NFRSMILAPRFSSNGKRALIS-------VQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +    IL   +S + +    S       +    +  I   D  +++  ++T   +I+ S 
Sbjct: 400 SESGAILDFSWSGDSRLLAYSYPEKKYFLSDVGSSSIRIYDTVNDSIHQVTTPGYIDFSP 459

Query: 308 SYSPDSSQIVFESDRE 323
           S+S D+S + + S R 
Sbjct: 460 SFSSDNSYLFYLSKRS 475



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 50/281 (17%), Positives = 91/281 (32%), Gaps = 42/281 (14%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +Y  +   K   +S I +VS +  +G I     +  R  +   Y + +       P  S 
Sbjct: 55  VYFRVMTGKSADSSDIYYVSLN--TGEISRVTYLQGRSTSRRMYTSVAGFTRDGNPVIST 112

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA------PRFS--SNGKRAL 273
           +     +++    ++    L    +  A + I N   +++       P +     G R  
Sbjct: 113 DA-YYPFSSPMLYELKNNNLYPMNLGPAMEIIYNGDGILIGRNTVDMPHWKHYRGGTRGK 171

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           I    +       VDL SN      N+  I         S++I F SD EG   +Y    
Sbjct: 172 ILYSDNGRDFKIIVDLDSNV-----NSPMIV--------SNRIYFISDHEGTANIYSCDL 218

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--------EKFAIGVMKKDGSQERL 385
           NG + K+ +   E    +      G  I F             +K  I +        + 
Sbjct: 219 NGKNIKKETDFNEYYVRNARS--DGKNIVFQMAGDLYLMGNGIKKLDINIKAPKLKSLQK 276

Query: 386 -LVEDSNLQAPTWSPSGRSL-------IFSRKKDGDTGSKL 418
            +  D  + +   SP G+         ++S    G     +
Sbjct: 277 SISMDDFITSYDISPDGKRFLAVSRGQVYSSGISGGPVFNI 317



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 48/118 (40%), Gaps = 10/118 (8%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE------DILRVY 240
           G  + SL ++D D  N++ +  S    + +  +S + + +AY+  + +          + 
Sbjct: 379 GNNRFSLYILD-DQLNLKKVDESESGAILDFSWSGDSRLLAYSYPEKKYFLSDVGSSSIR 437

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSNATER 296
           + DT ++ +  ++     +  +P FSS+        ++  D   D    DL      +
Sbjct: 438 IYDT-VNDSIHQVTTPGYIDFSPSFSSDNSYLFYLSKRSLDPVQDELVFDLGYQNITK 494


>gi|325093597|gb|EGC46907.1| WD40 repeat-containing protein [Ajellomyces capsulatus H88]
          Length = 828

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 16/167 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  K+A           V + D        R+ +    +    +S +  +  IS  +
Sbjct: 513 FSHDGTKLATT----GRENIVIIYDVATFSVIHRLTDHGGPVAYATWSPDDSKL-ISCSQ 567

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D    ++  D+++     LT  +      SA+++P+    V     + + QL      G 
Sbjct: 568 DYKARLW--DVETGHCI-LTIDHHHEPVTSAAWAPNGDSFV-TGSLDCQSQLCHWSVAGE 623

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                    +    D   SP G  +           I V   +   E
Sbjct: 624 SL--YKWTGQYRVRDCAISPDGRRLIAISTEK---RIYVYNFETRGE 665



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 54/165 (32%), Gaps = 13/165 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G +   + +++    +   D+ + +   RLT+       A++SPD S+++  S   
Sbjct: 513 FSHDGTKLATTGREN---IVIIYDVATFSVIHRLTDHGGPVAYATWSPDDSKLISCSQ-- 567

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +  +                       W+P GD          +  +      G   
Sbjct: 568 -DYKARLWDVETGHCILTIDHHHEPVTSAAWAPNGDSFVTGSLDC-QSQLCHWSVAGESL 625

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                   ++    SP GR LI    +      ++Y  +   R E
Sbjct: 626 YKWTGQYRVRDCAISPDGRRLIAISTEK-----RIYVYNFETRGE 665



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 69/217 (31%), Gaps = 16/217 (7%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG--EKGDFNSRILFVSESVVSG 187
           L D   + QI    + ++       +    D     +    E  +    + ++  S    
Sbjct: 459 LLDQVKQTQINQCLYHNTAEPPSLYSDHQCDRAQFPLRTSFELSEHTDEVWYLEFSHDGT 518

Query: 188 I-----IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
                  +N + + D    ++ +        +    +SP+  K+   + D +      L 
Sbjct: 519 KLATTGRENIVIIYDVATFSVIHRLTDHGGPVAYATWSPDDSKLISCSQDYK----ARLW 574

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D         I +    + +  ++ NG    ++   D    +    +   +  + T   +
Sbjct: 575 DVETGHCILTIDHHHEPVTSAAWAPNGDS-FVTGSLDCQSQLCHWSVAGESLYKWT-GQY 632

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                + SPD  +++  S     +++YV       ++
Sbjct: 633 RVRDCAISPDGRRLIAISTE---KRIYVYNFETRGEE 666


>gi|310641013|ref|YP_003945771.1| lipoprotein [Paenibacillus polymyxa SC2]
 gi|309245963|gb|ADO55530.1| Putative lipoprotein [Paenibacillus polymyxa SC2]
          Length = 394

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/296 (18%), Positives = 102/296 (34%), Gaps = 19/296 (6%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            +SD++      + GD  +R     E ++    +N L + +      R LTP R  +   
Sbjct: 78  QVSDELVVQSIDKLGDVYARSWLSDEELI-VERQNQLWIHNVKTNKERVLTPGRKALQLL 136

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              SP+Q+ V +          +      +     ++ +   + +    S   K  LI+ 
Sbjct: 137 AVVSPDQRHVFFTEGSTSSKYDIQGYILELSSG--KVTSAGQLDMTNEVSWGDKDHLITG 194

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINIS--ASYSPDSSQIVFE-SDREGKEQLYVMQS 333
             D  + +  +D      E L+     +    A      + I +  +D++G   L     
Sbjct: 195 TPDGKIHLIGLD---GKAEELSFQDPNHSELIAHVEKVGNAIFYTGNDKQGYPVLNRFTL 251

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---KKDGSQERLLVEDS 390
           N      I++           S  G  IA  K          M    + G ++ ++ + +
Sbjct: 252 NHPQAVTIAEG----AMSFAVSLDGKSIAIEKRKWNTSEPARMIILDEQGKEKGIVGQGT 307

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSIDLNGRNETLINTPAYASD-PQ-WV 443
            +   +WS  G  L FS   +   G + LY  D +    T + T   + D P  W 
Sbjct: 308 LMSRGSWSNDGSKLAFSIYDEDQQGMRGLYVFDQSTGKTTPVTTDIQSYDSPTVWS 363



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 61/195 (31%), Gaps = 12/195 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + ++  DG          +              + Y   D +    +      
Sbjct: 193 TGTPDGKIHLIGLDGKAEELSFQDPNHSELIAHVEKVGNAIFYTGNDKQGYPVLNRFTL- 251

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTNTLF 302
               P+ +       ++   S +GK   I  +K    E   +  +D Q      +     
Sbjct: 252 --NHPQAVTIAEG-AMSFAVSLDGKSIAIEKRKWNTSEPARMIILDEQGKEKGIVGQGTL 308

Query: 303 INISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           ++   S+S D S++ F     D++G   LYV   +      ++ D ++     VWS    
Sbjct: 309 MSRG-SWSNDGSKLAFSIYDEDQQGMRGLYVFDQSTGKTTPVTTDIQSYDSPTVWSTSAR 367

Query: 360 LI-AFTKFSGEKFAI 373
            +  +   S     +
Sbjct: 368 FLSMYQNISEGGKQL 382


>gi|309792257|ref|ZP_07686729.1| hypothetical protein OSCT_2680 [Oscillochloris trichoides DG6]
 gi|308225798|gb|EFO79554.1| hypothetical protein OSCT_2680 [Oscillochloris trichoides DG6]
          Length = 700

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 61/201 (30%), Gaps = 25/201 (12%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD----------IYSVDLQSNATERLTN 299
           P  + +      A   S + +R                      ++++       + L  
Sbjct: 277 PVNLTDSPETETAFALSPDRERIAFCRAAPGLDPADASLAVPSALWTMAASGGQPKLLAQ 336

Query: 300 TLFINISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRISQDKEA-SYFDPVW 354
                   ++S D   + F  D  G    +  ++ + + G   KRI    +A S   P W
Sbjct: 337 VGVSCADPAFSLDGKTLAFAVDETGAVPTQWSIFTVPATGGTPKRIQAAGDAWSRTAPQW 396

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGS----QERLLVEDSN------LQAPTWSPSGRSL 404
              G LI   +    +  + +    G        L+V D+          P  S  GR +
Sbjct: 397 LEGGALIYAAQAEDGRSTLFLRSPGGEVLDVGAPLMVGDATTARYQGFGRPLASLDGRRV 456

Query: 405 IFSRKKDGDTGSKLYSIDLNG 425
                +    G+ L  +  +G
Sbjct: 457 AVEALRSDTPGADLLILASDG 477



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 61/159 (38%), Gaps = 29/159 (18%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG----------KEQLYVMQ 332
           D++ +D  + A   LT++     + + SPD  +I F     G             L+ M 
Sbjct: 266 DLWRLDSATAAPVNLTDSPETETAFALSPDRERIAFCRAAPGLDPADASLAVPSALWTMA 325

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAF----TKFSGEKFAIGVMKKDGSQERLLVE 388
           ++G   K ++Q    S  DP +S  G  +AF    T     +++I  +   G   + +  
Sbjct: 326 ASGGQPKLLAQVG-VSCADPAFSLDGKTLAFAVDETGAVPTQWSIFTVPATGGTPKRIQA 384

Query: 389 DSNLQA---PTW-----------SPSGRSLIFSRKKDGD 413
             +  +   P W           +  GRS +F R   G+
Sbjct: 385 AGDAWSRTAPQWLEGGALIYAAQAEDGRSTLFLRSPGGE 423



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 29/245 (11%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +    G    ++      +  G     L  +D   A    LT S +        SP++++
Sbjct: 244 LQIPTGGGAPQLAAPIFYLYDG----DLWRLDSATAAPVNLTDSPETETAF-ALSPDRER 298

Query: 226 VAYATYDDE--------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +A+               +             PK +         P FS +GK    +V 
Sbjct: 299 IAFCRAAPGLDPADASLAVPSALWTMAASGGQPKLLAQVGVSCADPAFSLDGKTLAFAVD 358

Query: 278 KDEA----MDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           +  A      I++V       +R+      +   +  +    + I      +G+  L++ 
Sbjct: 359 ETGAVPTQWSIFTVPATGGTPKRIQAAGDAWSRTAPQWLEGGALIYAAQAEDGRSTLFLR 418

Query: 332 QSNGS----DQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGS 381
              G         +    +  +   +  P+ S  G  +A      +     + ++  DGS
Sbjct: 419 SPGGEVLDVGAPLMVGDATTARYQGFGRPLASLDGRRVAVEALRSDTPGADLLILASDGS 478

Query: 382 QERLL 386
               L
Sbjct: 479 LVETL 483



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 17/132 (12%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----------KFAIGVMK 377
           L+ + S  +    ++   E +      SP  + IAF + +              A+  M 
Sbjct: 267 LWRLDSATAAPVNLTDSPE-TETAFALSPDRERIAFCRAAPGLDPADASLAVPSALWTMA 325

Query: 378 KDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNGRNETLINTP 434
             G Q +LL +   +   P +S  G++L F+  + G   T   ++++   G     I   
Sbjct: 326 ASGGQPKLLAQVGVSCADPAFSLDGKTLAFAVDETGAVPTQWSIFTVPATGGTPKRIQAA 385

Query: 435 AYA---SDPQWV 443
             A   + PQW+
Sbjct: 386 GDAWSRTAPQWL 397


>gi|307564706|ref|ZP_07627236.1| dipeptidyl peptidase IV N-terminal domain protein [Prevotella amnii
           CRIS 21A-A]
 gi|307346634|gb|EFN91941.1| dipeptidyl peptidase IV N-terminal domain protein [Prevotella amnii
           CRIS 21A-A]
          Length = 738

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 60/385 (15%), Positives = 126/385 (32%), Gaps = 87/385 (22%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEF-----RLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W  L            + ++   V F      + +V + K I    F          AH
Sbjct: 86  AWAELPIDD------QPKIRNLYYVSFPFADKSIVEVSNGKSIYMIDFK---------AH 130

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            I D I   +  E      R   +     + +  N L V+D  GA  +        I++ 
Sbjct: 131 RIIDTI--ELQKE---AQVRKFNIQSHSTAYVQDNQLYVIDPSGAEHKLTKDGSSNIVYG 185

Query: 217 PR-------------FSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILA 262
                          +SP   ++A+   D   +    L+D   I   P           A
Sbjct: 186 QSVHRDEFGINGGLYWSPKGNRLAFYRMDQSMVANYPLVDVPEIGYVPT-----NGETKA 240

Query: 263 PRFS----SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQ 315
            + S           +  +K   + +   D+ ++ T  L      +    + ++SPD + 
Sbjct: 241 AKVSLIKYP------MVGEKSHKVTVGVYDINTDKTIYLHTGNPTDRYFTNITWSPDENI 294

Query: 316 IV-FESDREGKEQLYVMQSN---GSDQKRISQDKEASYFDPV-------WSPQGDLIAFT 364
           I  FE +R+ +   Y+   N   G     +  +K++ Y +P        W+     + ++
Sbjct: 295 IYMFELNRD-QNDCYLTAYNAYTGKKIANLYHEKDSKYVEPTHPIVFLPWN-DHQFVMYS 352

Query: 365 KFSGEKFAIGVMKKDGSQERLLVE---------DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +  G    + +  +DG + + L +           NL+        +S+I++  +     
Sbjct: 353 QKDGYN-HLYLFSEDGRELKQLTKGKWVVMKIIGFNLKK-------KSIIYTSNECNPIQ 404

Query: 416 SKLYSIDLNGRNETLINTPAYASDP 440
              + +++      L++      +P
Sbjct: 405 INTWMVNVETGKRRLLDNGKGYHNP 429


>gi|239905554|ref|YP_002952293.1| hypothetical protein DMR_09160 [Desulfovibrio magneticus RS-1]
 gi|239795418|dbj|BAH74407.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 374

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 72/226 (31%), Gaps = 40/226 (17%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                +  L + D    N   +       L  P FSP+   V +    +    +  L   
Sbjct: 140 GDDPAQARLMLCDIASGNA-SILAKPGGNLHSPSFSPDGGNVIFVRRTETG--QSELWSV 196

Query: 245 RIDRAPKRIGNFRSMI----LAPRFS-SNGKRALISVQKDEAMDIYSVDLQS--NATERL 297
           R    P+++     +       P FS ++G+         +   +YS+ L    N    L
Sbjct: 197 RPGEKPRKLAQAGGLAGDDFFEPVFSLADGRILY-----HDLESLYSMSLTGQKNNQTPL 251

Query: 298 TNTLFINISASYS-------PDSSQIVFESDREGKE-----------QLYVMQSNGSDQK 339
            N    +  A  S       P+S+ + F    EG              L++         
Sbjct: 252 KNFNQGHTGAFTSTARFIPRPNSTTLAFSMSVEGSPLFRKKVPDLSSALFLYDPQSRSAS 311

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKD 379
           R++     + F P W+  G  + FT +S         F I +++  
Sbjct: 312 RLTP-HNITAFAPAWTTDGQALVFTGYSDKHAGTARPFRIWMIRPG 356



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 84/257 (32%), Gaps = 40/257 (15%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +P  SP  ++ A+  + D+      ++          +      + +P FS +G   +  
Sbjct: 124 QPTLSPEARQAAWVEHGDDPAQARLMLCDIASGNASILAKPGGNLHSPSFSPDGGNVIFV 183

Query: 276 VQ-KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK------EQL 328
            + +    +++SV        +L     +     + P     VF S  +G+      E L
Sbjct: 184 RRTETGQSELWSVRP-GEKPRKLAQAGGLAGDDFFEP-----VF-SLADGRILYHDLESL 236

Query: 329 YVMQSNG--SDQKRISQDKEASYFDPVWS------PQGDLIAFTKFSGE----------- 369
           Y M   G  ++Q  +    +        +      P    +AF+                
Sbjct: 237 YSMSLTGQKNNQTPLKNFNQGHTGAFTSTARFIPRPNSTTLAFSMSVEGSPLFRKKVPDL 296

Query: 370 KFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS----KLYSIDLN 424
             A+ +      S  RL   +    AP W+  G++L+F+   D   G+    +++ I   
Sbjct: 297 SSALFLYDPQSRSASRLTPHNITAFAPAWTTDGQALVFTGYSDKHAGTARPFRIWMIRP- 355

Query: 425 GRNETLINTPAYASDPQ 441
                +   P     P 
Sbjct: 356 -GQPPVDMGPGEDPRPA 371


>gi|218231403|ref|YP_002365008.1| putative prolyl oligopeptidase family protein [Bacillus cereus
           B4264]
 gi|218159360|gb|ACK59352.1| putative prolyl oligopeptidase family protein [Bacillus cereus
           B4264]
          Length = 655

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 97/293 (33%), Gaps = 45/293 (15%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++      I +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 33  VAFVKKTADWKDNIYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDARCIAYLSPVGD 91

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQS-- 291
              ++++      R  + I + +  +   ++   GK      Q  E  +I    DL    
Sbjct: 92  GENQIFVKSLDGYRDVQ-ITDEKEGVSTFKWGPTGKGLYYVTQSKECEEIKKRKDLYGDF 150

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  +     +I I           V +SD +  E   V         +++  K+  
Sbjct: 151 QHIGKEHQNNCLYYIEIE---------KVIQSDTDEHENRVVY--------QLTDGKDFH 193

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWSPSG 401
             +   S  G  + F               + ++     + + L V+     +  +SP G
Sbjct: 194 IHEFDISNDGKKVVFMATPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPDG 253

Query: 402 RSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
             + ++         R    D+  ++Y I+  G     +        P QW  
Sbjct: 254 SKICYTASIREKDYYRNHIQDSTLEIYDIN-TGEVIQPVTNFDSTVMPLQWTA 305


>gi|154310108|ref|XP_001554386.1| hypothetical protein BC1G_06974 [Botryotinia fuckeliana B05.10]
 gi|150851535|gb|EDN26728.1| hypothetical protein BC1G_06974 [Botryotinia fuckeliana B05.10]
          Length = 897

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 73/218 (33%), Gaps = 25/218 (11%)

Query: 204 RYLTPSRDQILFEP--------RFSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRI 253
           R++  +R  I   P         F+P +  +   +     + I ++    +      + +
Sbjct: 643 RFVLHNRIGIEQAPLQIYCSALVFAPEESIIRKKFQECIPDWIYKISRTRSNWSATLQTL 702

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPD 312
                 + +  FS +GK    S   D+ + ++  D+ +    + L        S ++SPD
Sbjct: 703 EGHSESVTSVAFSPDGKVVA-SGSNDKTIRLW--DVATGESLQTLEGHSESVRSVAFSPD 759

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +   SD    + + +      +  +  +          +SP G ++A          
Sbjct: 760 GKVVASGSD---DKTIRLWDVATGESLQTLEGHLDWVRSVSFSPDGKVVASGSRDKT--- 813

Query: 373 IGVMKKDGSQERLLVEDSNLQAPT-----WSPSGRSLI 405
           + +      +    +E  ++   +     +S S   +I
Sbjct: 814 VRLWDVATGESLQTLEGHSVLEASSVFERYSISNHWII 851



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 42/119 (35%), Gaps = 11/119 (9%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPD   +   S+    + + +      +  +  +    S     +SP G ++A  
Sbjct: 710 TSVAFSPDGKVVASGSN---DKTIRLWDVATGESLQTLEGHSESVRSVAFSPDGKVVASG 766

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   I +      +    +E       + ++SP G+ +    +   D   +L+ +
Sbjct: 767 SDDKT---IRLWDVATGESLQTLEGHLDWVRSVSFSPDGKVVASGSR---DKTVRLWDV 819



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG    ++ + D              + +    FSP+ + VA  + D      + L D
Sbjct: 721 VASGSNDKTIRLWDVATGESLQTLEGHSESVRSVAFSPDGKVVASGSDDK----TIRLWD 776

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + + +      + +  FS +GK    S  +D+ + ++  D+ +  
Sbjct: 777 VATGESLQTLEGHLDWVRSVSFSPDGKVVA-SGSRDKTVRLW--DVATGE 823


>gi|315498308|ref|YP_004087112.1| aminoacyl peptidase [Asticcacaulis excentricus CB 48]
 gi|315416320|gb|ADU12961.1| aminoacyl peptidase [Asticcacaulis excentricus CB 48]
          Length = 846

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 65/186 (34%), Gaps = 16/186 (8%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQIV 317
           L+PR+S +G R    V     ++++  D+++   ++LT             +  D S  +
Sbjct: 150 LSPRWSPDGTRLGFLVDASGGLELWVADVKTATAKKLTGGIVNAAFGAGFDWLSDGSGAL 209

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---AIG 374
           F +   G+    +     S    I Q+ +               A+ +   + +    I 
Sbjct: 210 FSAVPAGRGAAPLKDPTPSGP--IIQESKGRTAAIRTYQDLLGNAYDEALFDYYFTSQIT 267

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK--------DGDTGSKLYSIDLNGR 426
            +         +       + + SP G+ L+ SR K         G   +++    L+G+
Sbjct: 268 RVSLSDGTITAIGTPGLYTSMSVSPDGKYLLTSRLKRPYSYLVPAGRFPTEIAVSTLDGK 327

Query: 427 NETLIN 432
              L+ 
Sbjct: 328 PVKLLA 333



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 47/286 (16%), Positives = 88/286 (30%), Gaps = 53/286 (18%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           NSL   D    ++R +          PR+SP+  ++ +   D    L +++ D +   A 
Sbjct: 126 NSLAFEDVTTGSVRPVALPAGTRFLSPRWSPDGTRLGFL-VDASGGLELWVADVKTATAK 184

Query: 251 KRIGNFRSMILAP--RFSSNGKRALISVQKDEAMDIYSVDL--------QSNATERLTNT 300
           K  G   +        + S+G  AL S            D         +S        T
Sbjct: 185 KLTGGIVNAAFGAGFDWLSDGSGALFSAVPAGRGAAPLKDPTPSGPIIQESKGRTAAIRT 244

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +  +Y        F S      Q+  +  +      I       Y     SP G  
Sbjct: 245 YQDLLGNAYDEALFDYYFTS------QITRVSLSDGTITAI--GTPGLYTSMSVSPDGKY 296

Query: 361 IAFTKFS--------GEKF--AIGVMKKDGSQERLLVEDSNLQ--------------APT 396
           +  ++            +F   I V   DG   +LL +                   + +
Sbjct: 297 LLTSRLKRPYSYLVPAGRFPTEIAVSTLDGKPVKLLADRPLTDNLPAAFDAVPTGPRSVS 356

Query: 397 WSPS-GRSLIFSRKKDGDTGSK-------LYSIDL--NGRNETLIN 432
           W      +L+++  +DG            L++++   +G  + LI+
Sbjct: 357 WRADASATLVWAEAQDGGDPKAKVAIRDTLFTLNAPFDGAPQKLID 402


>gi|116074010|ref|ZP_01471272.1| dipeptidyl anminopeptidase [Synechococcus sp. RS9916]
 gi|116069315|gb|EAU75067.1| dipeptidyl anminopeptidase [Synechococcus sp. RS9916]
          Length = 672

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 64/205 (31%), Gaps = 19/205 (9%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI--NISA 307
           P+ +      I     S +G R +        M+++   L      +L           A
Sbjct: 37  PREVLFGNPEISGVDLSPDGTRIVYRAPYQGVMNLWVRTLDGKEPPQLLTRRQDRPQRGA 96

Query: 308 SYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIA 362
           +++ D   +V   D EG E   L  +     + + ++  +             P   ++ 
Sbjct: 97  NWTFDGRYLVTSRDSEGDENTVLVRIDPETGESQDLTPARGVQARVVGIHRDVPNEVVVG 156

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL-YSI 421
                     + V+K D  +  LL   ++         GR +      +G     L   +
Sbjct: 157 LNDRDPRFHDLYVIKIDSGERELLYRSTD--------DGRFISSVEWLNGRWQPVLRGRV 208

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
             +G +   +  P  +   +W  F+
Sbjct: 209 LPDGGSAYELRLPGAS---EWRPFL 230



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 70/190 (36%), Gaps = 24/190 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALIS--V 276
           SP+  ++ Y     + ++ +++        P+ +   +        ++ +G+  + S   
Sbjct: 53  SPDGTRIVY-RAPYQGVMNLWVRTLDGKEPPQLLTRRQDRPQRGANWTFDGRYLVTSRDS 111

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFE--SDREGKEQ-LYVMQ 332
           + DE   +  +D ++  ++ LT    +         D    V    +DR+ +   LYV++
Sbjct: 112 EGDENTVLVRIDPETGESQDLTPARGVQARVVGIHRDVPNEVVVGLNDRDPRFHDLYVIK 171

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI---GVMKKDGSQERLLVED 389
            +  +++ + +  +           G  I+  ++   ++     G +  DG     L   
Sbjct: 172 IDSGERELLYRSTD----------DGRFISSVEWLNGRWQPVLRGRVLPDGGSAYELRLP 221

Query: 390 SNLQAPTWSP 399
              +   W P
Sbjct: 222 GASE---WRP 228


>gi|168698848|ref|ZP_02731125.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 668

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 22/202 (10%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKR 271
           I   P+ SP+ + VA  + D    L V+      +  PK +  F        RFS +G +
Sbjct: 94  IASYPQVSPDGRLVAVCSQDK---LSVWEAPVDGESKPKCLAEFAAGRPRLFRFSPDGSK 150

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +++        +   D+QS     L        + ++S D  +        G     V+
Sbjct: 151 LILTTASSGVSSVLLCDIQSGQATALGGGDGYFEAVNFSGDGKRAA------GVVGRKVV 204

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             + +  + ++  + + +    ++       L+A     G K     +     + R    
Sbjct: 205 LWDTASGRTLADHQLSDWLAGTFALDSAGQVLVARVYLDGGKSEWRAIDPLTGKLR---- 260

Query: 389 DSNLQAP-----TWSPSGRSLI 405
           D     P      ++P G++L+
Sbjct: 261 DGFKGPPGGRWAAYAPDGKTLL 282



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 36/104 (34%), Gaps = 4/104 (3%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDL 360
            I      SPD   +   S  + K  ++    +G S  K +++          +SP G  
Sbjct: 93  AIASYPQVSPDGRLVAVCS--QDKLSVWEAPVDGESKPKCLAEFAAGRPRLFRFSPDGSK 150

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRS 403
           +  T  S    ++ +      Q   L   D   +A  +S  G+ 
Sbjct: 151 LILTTASSGVSSVLLCDIQSGQATALGGGDGYFEAVNFSGDGKR 194



 Score = 36.9 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 97/315 (30%), Gaps = 37/315 (11%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           WD    + +      +S    + +   ++ D      G+    ++  + +     +G   
Sbjct: 292 WDPAAGQAVRAFDVVASGGGLQDVPARLTPD------GKVLVAHNGHMLMRWDAATGKP- 344

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L     DG N           +     SP+ + +A    D     RV + DT   +  
Sbjct: 345 --LFRTQDDGHN---------GYVNGLGVSPDGKLIATRGLDS----RVCVWDTATGKEV 389

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-----NTLFINI 305
            R     S      F+ NGK   +       +  Y   L      R             +
Sbjct: 390 WRTAAQWSSAPYLVFAPNGKHLYLPGPGPGEVTRYDA-LAGKIAGRFVVDLKEGGQGGVV 448

Query: 306 SASYSPDSS-----QIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S   S D            +D  G    +    +   +  R++  +++ + +   SP   
Sbjct: 449 SIRLSADGKTLHGLSRGATADDSGLLTTWDTATAARVNVARLTDPRQSDWGE--LSPGAQ 506

Query: 360 LIAFTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            IA   +  G   A+G   K+   +  +   S L +  +S  G+       +  D  +K 
Sbjct: 507 FIAEVGYGRGGVVALGSPDKNLLADAKVPGHSLLLSGHFSDDGKWFTLVTHRMEDGVAKY 566

Query: 419 YSIDLNGRNETLINT 433
            ++ ++     +  T
Sbjct: 567 AAVVVSTPIWRVTAT 581


>gi|149178051|ref|ZP_01856647.1| WD-40 repeat [Planctomyces maris DSM 8797]
 gi|148843108|gb|EDL57475.1| WD-40 repeat [Planctomyces maris DSM 8797]
          Length = 1284

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 49/310 (15%), Positives = 100/310 (32%), Gaps = 55/310 (17%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            E  +WD +  +++   +    P + R +           +T  +     R++ +      
Sbjct: 879  ELLVWDWQSGRELTSLQQH--PDNVRFL-----------LTPPE---RDRLVTIDVKGNV 922

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRD-QILFEPR---FSPNQQKVAYATYDDEDILRVYLM 242
             +    L        ++R +    D      PR   F P+ Q+V         ++  +  
Sbjct: 923  KLFSGELIP------DVRSVLTEPDLYPHQHPREIKFDPDSQRVGVCNEQTGALIWDFSD 976

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---------DLQSNA 293
             +++     R  +      A  FS +      +        I  +         D +S  
Sbjct: 977  PSKVKGRLYR-ASGPVGTRAFDFSPDFNYLATTADTMPRAIIRELQEKAPVSIWDTESGE 1035

Query: 294  TERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              R+         S ++ P     V    ++G   ++ ++S  +   +I +D  AS    
Sbjct: 1036 VVRILEGETSFVESGTFDPTGRYFV-SGLKDGNIMVWDLESESNLPVQILKDHVASVTKL 1094

Query: 353  VWSPQGDLIAFTKFSGEKF--------AIGVMKKDGS--QERLLVEDSNLQAPTW----- 397
             +SP G L+      GE F         I    + G   Q +  +E      PT+     
Sbjct: 1095 KFSPDGRLLLSGGCGGEAFGKKVMPAVKIWTRSEPGGEFQVQQTIELDRKVPPTFGVQDL 1154

Query: 398  --SPSGRSLI 405
              SP G+ ++
Sbjct: 1155 DLSPDGKWIL 1164


>gi|325279697|ref|YP_004252239.1| Dipeptidyl-peptidase IV [Odoribacter splanchnicus DSM 20712]
 gi|324311506|gb|ADY32059.1| Dipeptidyl-peptidase IV [Odoribacter splanchnicus DSM 20712]
          Length = 732

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 52/291 (17%), Positives = 104/291 (35%), Gaps = 57/291 (19%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDG-------ANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           ++F+  S +S   + +L     DG         +R +       + E     N  ++   
Sbjct: 10  LMFIFCSQLSAQKQLTLEDFFVDGTFRTKGVYGLRSMNDGEHYTVLE----NNGTRIVKY 65

Query: 230 TYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS------VQKDEAM 282
           +Y     +  +  + T  D    RI ++        F+++  R LI        ++    
Sbjct: 66  SYKTGLPVATLLDLKTLEDSPVSRIDDY-------TFNADESRILICTNKKPIYRRSFTA 118

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D Y  D ++   + L+        A++SP   Q+ F  D      L++       +++I+
Sbjct: 119 DYYLFDFKNKEIKPLSEG-GSQRLATFSPTGLQVAFVRD----NNLFIHDIRFGSERQIT 173

Query: 343 QDKEASY-----------------FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +D + ++                     W+P G  IA+ KF         M     Q   
Sbjct: 174 RDGQYNHIINGAPDWVYEEEFAFNRAFEWAPDGSAIAYIKFDESDVREFQMNMFEGQSPA 233

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK--LYSIDLNGRNETLINTP 434
           L +  N   P+      + ++   K G+  SK  +Y  D++ R  T ++T 
Sbjct: 234 LKQ--NELYPS------NYVYKYPKAGEKNSKVSVYVYDVSDRTTTKMDTG 276



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/231 (10%), Positives = 77/231 (33%), Gaps = 20/231 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+   +AY  +D+ D+    +          +           ++   G       +K
Sbjct: 202 WAPDGSAIAYIKFDESDVREFQMNMFEGQSPALKQNELYPSNYVYKYPKAG-------EK 254

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFE--SDREGKEQLYVMQS 333
           +  + +Y  D+    T ++      +I      ++ D  ++     +  + K ++ +  +
Sbjct: 255 NSKVSVYVYDVSDRTTTKMDTGEEDDIYLPRIRWTQDPKKLAIIRLNRHQNKMEVLLANA 314

Query: 334 NGSDQKRISQD------KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                  + ++       E++  + V+   G     T        + +   +G + + + 
Sbjct: 315 KVGTIVPLYREENKYYIDESNLDNLVFLDNGTQFVITSEKSGYMHLYLYDLNGRERQAIT 374

Query: 388 EDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           + +      +      +   +S  ++      +YSI+  G  + L     +
Sbjct: 375 KGNFDIIDFYGYDPVRKLFYYSSYEESPLEKYIYSINEKGLKKKLTPVKGW 425


>gi|85711890|ref|ZP_01042945.1| Dipeptidyl aminopeptidase [Idiomarina baltica OS145]
 gi|85694287|gb|EAQ32230.1| Dipeptidyl aminopeptidase [Idiomarina baltica OS145]
          Length = 774

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 55/330 (16%), Positives = 104/330 (31%), Gaps = 72/330 (21%)

Query: 144 FFSSPASWRKIAHTISD-DIYQSITGE----KGDFNSRILFVSESVVSGII-----KNSL 193
           F ++  SWR   HT+ D  +    TGE     GD     L  ++    G       +N++
Sbjct: 142 FTNTKRSWR--THTLGDYWVLNRTTGELRQLGGDAPESTLQFAKFNPQGTKVAYVMQNNI 199

Query: 194 CVMDRDGANIRYLTPSRDQILFEP----------------RFSPNQQKVAYATYDDEDIL 237
            V D D  NI+ LT      +                   R+SP+ Q +AY   D E   
Sbjct: 200 YVQDLDTFNIQTLTNDGSNTIVNGTFDWVNEEEFFLRDGFRWSPDGQHIAYWQLDTEGTP 259

Query: 238 RVYLMDTRIDRAPKRI-------------------------GNFRSMILAPR-------- 264
              +++      P                              +  +   PR        
Sbjct: 260 TFTMINNTDSLYPTLKQFPYPKVGETNAAMRIGVMPADGGDTTWMQLPGDPRMHYLVRMN 319

Query: 265 FSSNGKRALIS--VQKDEAMDIYSVDLQSNATERL----TNTLF-INISASYSPDSSQIV 317
           ++ N  + LI    +K +   +Y  D+ +  +++L    T++         +  +     
Sbjct: 320 WAGNSSQLLIQQLTRKQDVNRVYLSDISNGRSQKLLSETTDSWAEYVDDVKFLDNGKSFT 379

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGV 375
           + S+R G   +Y ++ +      I++           +     + F           +  
Sbjct: 380 WLSERSGYRHIYRVERDTGKMTTITRGNWDVVEVLRINENDGWVYFIASPETPLERYLFR 439

Query: 376 MKKDGSQ--ERLLVEDSNLQAPTWSPSGRS 403
            K DGS   ERL  +     + + S   + 
Sbjct: 440 AKLDGSGVLERLTPDQPGTHSYSVSQDAKY 469


>gi|331665339|ref|ZP_08366240.1| conserved hypothetical protein [Escherichia coli TA143]
 gi|331057849|gb|EGI29835.1| conserved hypothetical protein [Escherichia coli TA143]
          Length = 416

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 54/160 (33%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G +  +++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPHQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP GR L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGRWLAWME------GGQLWITETD 415



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPHQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGRWLAW---MEGG-QLWITETD 415



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G     LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPHQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGRWLAW 403



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 54/152 (35%), Gaps = 32/152 (21%)

Query: 290 QSNATERLT----NTLFINISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRI 341
           Q  A +++T    N L  N + +++PDS  +VF+    G     E +  +  +  + + I
Sbjct: 9   QDRAMKQITFAPRNHLLTNTN-TWTPDSQWLVFDVRPSGASFTGETIERVNIHTGEVEVI 67

Query: 342 SQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMK--------KDGSQERLLVEDSNL 392
            +  + +Y   V   P+ +   F                       +G +   L +  ++
Sbjct: 68  YRASQGAYVGVVTVHPKSEKYVFIHGPENPDETWHYDFHHRRGVIAEGGKVSNL-DAMDI 126

Query: 393 QAP-------------TWSPSGRSLIFSRKKD 411
            AP              +SP+G  + F+    
Sbjct: 127 TAPYTPGALRGGSHVHVFSPNGERVSFTYNDH 158


>gi|320107307|ref|YP_004182897.1| WD40 repeat-containing protein [Terriglobus saanensis SP1PR4]
 gi|319925828|gb|ADV82903.1| WD40 repeat, subgroup [Terriglobus saanensis SP1PR4]
          Length = 584

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 76/220 (34%), Gaps = 13/220 (5%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           AN R +      ++    +SP+  K+   + D        + D    R  +      + +
Sbjct: 113 ANSRLILRGHTGVITHAAYSPDGSKIVTTSADH----TARIWDAYSGRQLRPSLQHAARV 168

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               FS +G+R +++  +D    ++ ++        +     I + A +SPD   +   S
Sbjct: 169 FTAEFSPDGRR-VVTGSEDGTALVWDIETARPIGTPMYLKEGIPL-AHFSPDGKLVATLS 226

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +GK +L+   +                    +SP     A    S     I   K   
Sbjct: 227 T-DGKVRLW--NAETGQPVSPIIGYRGDAVSVAFSPDSAH-AVVATSENMADILDAKTGA 282

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                + +++ +    +S  G +++ +     D  +K++ 
Sbjct: 283 HLPNPMRQNNLVLTAVFSADGNTVLTAS---ADHTAKIWD 319



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/359 (14%), Positives = 103/359 (28%), Gaps = 93/359 (25%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           R+WD    +Q+          S +  A      ++ +     G            VV+G 
Sbjct: 148 RIWDAYSGRQL--------RPSLQHAA-----RVFTAEFSPDG----------RRVVTGS 184

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              +  V D + A          + +    FSP+ + VA  + D +    V L +    +
Sbjct: 185 EDGTALVWDIETARPIGTPMYLKEGIPLAHFSPDGKLVATLSTDGK----VRLWNAETGQ 240

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISA 307
               I  +R   ++  FS +   A+++  ++ A     +D ++ A          + ++A
Sbjct: 241 PVSPIIGYRGDAVSVAFSPDSAHAVVATSENMAD---ILDAKTGAHLPNPMRQNNLVLTA 297

Query: 308 SYSPDSSQIVFESDREGKEQLY-------------------------------------- 329
            +S D +  V  +  +   +++                                      
Sbjct: 298 VFSADGNT-VLTASADHTAKIWDARTHLPTGFSFSHGASIEAAAFNHDATRVLTTSLDHT 356

Query: 330 --VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
             V  +   +         A      +SP G+ +  T          V      ++  L 
Sbjct: 357 ARVWDAKTGEPITPPLQHGAGVVRGAFSPDGNFVVTTAVDRAT---RVWDATSGEQVFLP 413

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                      +SP+  SL+ S                 G    + + P     P WV 
Sbjct: 414 IRTPGVASTAVFSPNSSSLMVS----------------EGTTVQVFDIPPTGPTPTWVA 456



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/304 (12%), Positives = 84/304 (27%), Gaps = 59/304 (19%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+    ++  + D         +      +F   FSP+ ++V   + D        + D 
Sbjct: 139 VTTSADHTARIWDAYSGRQLRPSLQHAARVFTAEFSPDGRRVVTGSEDG----TALVWDI 194

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFI 303
              R        +  I    FS +GK    ++  D  + ++  + ++      +      
Sbjct: 195 ETARPIGTPMYLKEGIPLAHFSPDGKLVA-TLSTDGKVRLW--NAETGQPVSPIIGYRGD 251

Query: 304 NISASYSPDSSQ---------------------------------IVFESD------REG 324
            +S ++SPDS+                                   VF +D         
Sbjct: 252 AVSVAFSPDSAHAVVATSENMADILDAKTGAHLPNPMRQNNLVLTAVFSADGNTVLTASA 311

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                +  +        S    AS     ++     +  T          V      +  
Sbjct: 312 DHTAKIWDARTHLPTGFSFSHGASIEAAAFNHDATRVLTTSLDHTA---RVWDAKTGEPI 368

Query: 385 L--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN--TPAYASDP 440
              L   + +    +SP G  ++       D  ++++  D     +  +   TP  AS  
Sbjct: 369 TPPLQHGAGVVRGAFSPDGNFVV---TTAVDRATRVW--DATSGEQVFLPIRTPGVASTA 423

Query: 441 QWVG 444
            +  
Sbjct: 424 VFSP 427


>gi|257058634|ref|YP_003136522.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Cyanothece sp. PCC 8802]
 gi|256588800|gb|ACU99686.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Cyanothece sp. PCC 8802]
          Length = 644

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 50/129 (38%), Gaps = 15/129 (11%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-------GEKFAIGVMKK 378
             L  +  N      +    +  Y  P  SP G  + +  ++       G +  +  ++ 
Sbjct: 149 NTLVSIDLNSGKINTLVSGCD-FYSSPRLSPDGTQLTWISWNHPNLPWDGSQLWLATVQA 207

Query: 379 DGS--QERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           DGS  Q RL+   +N  +  P WSP G+ L FS  + G     LY     G  + L    
Sbjct: 208 DGSLDQVRLIAGGTNESICEPKWSPDGQ-LYFSSDRRG--WWNLYRYTQKGAIDPLFPLN 264

Query: 435 AYASDPQWV 443
           A  S P WV
Sbjct: 265 AEFSYPHWV 273



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 22/171 (12%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-----EQLY-- 329
           +K+    + S+DL S     L +      S   SPD +Q+ + S           QL+  
Sbjct: 144 EKEPENTLVSIDLNSGKINTLVSGCDFYSSPRLSPDGTQLTWISWNHPNLPWDGSQLWLA 203

Query: 330 VMQSNGS--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            +Q++GS    + I+     S  +P WSP G  + F+      + +    + G+ + L  
Sbjct: 204 TVQADGSLDQVRLIAGGTNESICEPKWSPDGQ-LYFSSDRRGWWNLYRYTQKGAIDPLFP 262

Query: 388 EDSNLQAPTW----SPSG----RSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            ++    P W    S         +I S  +DG    + Y   L+ + + L
Sbjct: 263 LNAEFSYPHWVFGLSNYSFISESHVICSFNQDG----QWYLASLDTQQKQL 309



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 69/205 (33%), Gaps = 36/205 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQII--GKKFFSSPASWR---------------KIAH 156
           G+V +       V  R+ +      +I  G  +F + +  R               +  +
Sbjct: 60  GQVTEMTPQPFNVRTRVHEYGGGAFLIVQGTLYFINFSDQRLYQKLPNQDPTPLTPEGTY 119

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQIL 214
             +D I   +         R++ V E    G  +  N+L  +D +   I  L    D   
Sbjct: 120 RYADLILDPLRH-------RLICVGEDHSQGEKEPENTLVSIDLNSGKINTLVSGCD-FY 171

Query: 215 FEPRFSPNQQKVAYATYDDEDILR-------VYLMDTRIDRAPKRIGNFRSMILA-PRFS 266
             PR SP+  ++ + +++  ++           +         + I    +  +  P++S
Sbjct: 172 SSPRLSPDGTQLTWISWNHPNLPWDGSQLWLATVQADGSLDQVRLIAGGTNESICEPKWS 231

Query: 267 SNGKRALISVQKDEAMDIYSVDLQS 291
            +G +   S  +    ++Y    + 
Sbjct: 232 PDG-QLYFSSDRRGWWNLYRYTQKG 255


>gi|74220242|dbj|BAE31300.1| unnamed protein product [Mus musculus]
          Length = 421

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 67/199 (33%), Gaps = 18/199 (9%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   M+    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWDLKDDGNMVKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPD S +         + +++   +     R  +          +SP 
Sbjct: 211 RAHQNWVYSCAFSPDCSMLC---SVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKD-----GSQERLLV-------EDSNLQAPTWSPSGRSLI 405
           G L+A   +    +       D     G               D  ++A ++S  G  + 
Sbjct: 268 GALLATASYDTRVYVWDPHNGDLLMEFGHLFPSPTPIFAGGANDRWVRAVSFSHDGLHVA 327

Query: 406 FSRKKDGDTGSKLYSIDLN 424
                  D   + + ID +
Sbjct: 328 ---SLADDKMVRFWRIDED 343



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L + + +    +++PD S ++  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K +   +   Y    +SP   ++     S   F +  M K     +L     
Sbjct: 200 LKDDGNMVKVLRAHQNWVY-SCAFSPDCSMLCSVGASKAVF-LWNMDKYTMIRKLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 258 DVVACDFSPDGALLATASY 276


>gi|223934744|ref|ZP_03626664.1| serine/threonine protein kinase with WD40 repeats [bacterium
           Ellin514]
 gi|223896699|gb|EEF63140.1| serine/threonine protein kinase with WD40 repeats [bacterium
           Ellin514]
          Length = 964

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 85/246 (34%), Gaps = 31/246 (12%)

Query: 191 NSLCVMDRDGANIRYLTP---------SRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             + V + +GA   Y  P              L    FSP+ + +  +  D    +    
Sbjct: 420 KRIVVAEYNGAARIYELPTGGTSGKTCGAGTRLRSAAFSPDGKYIVTSGEDGYARIWDAN 479

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
              RID  P         +    F+ +G R  I+   D    ++  + ++   + +    
Sbjct: 480 NLERIDDLP-----HPGPVYHSSFNFDGSRL-ITACGDGNARVW--NFKTRKQDLIIKHG 531

Query: 302 FINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             ++  A++S D   IV            +  +     K      ++      +SP  + 
Sbjct: 532 TNDVCFAAFSGDGRLIVTT---GYDYTARIWDAVDGHAKAPPLRHKSWVIYAAFSPDNEK 588

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSK 417
           +A   +         + + G+  ++L + ++L    +  +SP GR ++ +     D  ++
Sbjct: 589 LATASWDRS----ARVWETGTGRQILPDMNHLDGVGSVEFSPDGRMILTAS---FDGTAR 641

Query: 418 LYSIDL 423
           L+  D 
Sbjct: 642 LWHADT 647



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/246 (11%), Positives = 73/246 (29%), Gaps = 22/246 (8%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +      ++S   F    +++     +  V +        +       +    FS + + 
Sbjct: 487 LPHPGPVYHSSFNFDGSRLITACGDGNARVWNFKTRKQDLIIKHGTNDVCFAAFSGDGRL 546

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +    YD        + D     A       +S ++   FS + ++   +   D +  ++
Sbjct: 547 IVTTGYD----YTARIWDAVDGHAKAPPLRHKSWVIYAAFSPDNEKLA-TASWDRSARVW 601

Query: 286 SVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
               ++    ++    N L    S  +SPD  +++  +  +G  +L+   +         
Sbjct: 602 ----ETGTGRQILPDMNHLDGVGSVEFSPDG-RMILTASFDGTARLWHADTLAPLGSNPL 656

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG- 401
                      +   G  I      G    + +         + V      + + S  G 
Sbjct: 657 LRHRQRVSRASFGHDGHTILTASIDGT---VRIWDLASGALPIPVP-----SVSLSDDGS 708

Query: 402 RSLIFS 407
           R L  +
Sbjct: 709 RYLAVT 714



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 52/327 (15%), Positives = 98/327 (29%), Gaps = 48/327 (14%)

Query: 113 TGRVIKEGKDR--LRVEF----RLW--DVK---DRKQIIGKKFFSSPASWRKIAHTISDD 161
            G V      R  L   F    RLW  D         ++  +   S AS+    HTI   
Sbjct: 619 VGSVEFSPDGRMILTASFDGTARLWHADTLAPLGSNPLLRHRQRVSRASFGHDGHTILTA 678

Query: 162 IYQSITGEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
                       +  +     SV  S      L V +        ++      L     +
Sbjct: 679 SIDGTVRIWDLASGALPIPVPSVSLSDDGSRYLAVTNGIFQVRETISDRPISTLVNTGHA 738

Query: 221 PNQQKVA---YATYDDEDILR--------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            ++ ++    Y      +I          +   D    +         +      FS  G
Sbjct: 739 VDKAELGCHGYFVLGMSEIRSNSASTNHLLQFWDANTGQVLASGLELTNSFSGMAFSGEG 798

Query: 270 KRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           KR  I   ++ +  I+  D+ +               SA ++ D++ +   S      +L
Sbjct: 799 KRLAI--FREGSAQIW--DIVTRKPISPWLQHDERISSAIFNSDATLLATVS----GSKL 850

Query: 329 YVMQSNGS-----DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVMKK 378
            +             K +++ K A      +SP G LI  T    ++F      +  +  
Sbjct: 851 RLWNVQSGKLLFEPLKHLTRVKFA-----EFSPDGSLII-TGCQDDQFTKCYAQVWSVAT 904

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L  +  + + ++SP GR ++
Sbjct: 905 GLPVGPQLGHNDGVISASFSPDGRRVV 931



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 30/69 (43%), Gaps = 4/69 (5%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +S  G  I   +++G    I  +   G+  +     + L++  +SP G+ ++       D
Sbjct: 415 FSSDGKRIVVAEYNGAA-RIYELPTGGTSGKTCGAGTRLRSAAFSPDGKYIV---TSGED 470

Query: 414 TGSKLYSID 422
             ++++  +
Sbjct: 471 GYARIWDAN 479



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 12/117 (10%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             A +S D  +IV  ++  G  ++Y + + G+  K  +           +SP G  I  T
Sbjct: 411 DDAEFSSDGKRIV-VAEYNGAARIYELPTGGTSGK--TCGAGTRLRSAAFSPDGKYIV-T 466

Query: 365 KFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                   I       + ER+  L     +   +++  G  LI      GD  ++++
Sbjct: 467 SGEDGYARIWDAN---NLERIDDLPHPGPVYHSSFNFDGSRLI---TACGDGNARVW 517


>gi|170737554|ref|YP_001778814.1| coagulation factor 5/8 type domain-containing protein [Burkholderia
           cenocepacia MC0-3]
 gi|169819742|gb|ACA94324.1| coagulation factor 5/8 type domain protein [Burkholderia
           cenocepacia MC0-3]
          Length = 480

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 86/267 (32%), Gaps = 23/267 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYD 232
           +  L     V  G   + L + D     +  L+ S   I       FSP+ + +A+    
Sbjct: 55  TGKLVYHSYVKYGDGTSQLFLYDFSAHTLTQLSKSAWGITDPMNGVFSPDGKWLAFMGIS 114

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +     V+++       P  + N         P+FS++GK  +     D      S    
Sbjct: 115 NG-AWNVFMLQLGAGTPPVNMTNSTGATRNEDPKFSTDGKTLVFKQNGDVKQATLSYTSA 173

Query: 291 S---NATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                +   LTN            +PD+S + + +       L              +  
Sbjct: 174 GPVFTSVVSLTNAPAGAEYSMPFLAPDASAVYYATGTGSNMGLMKRTIATGATAVFDRPA 233

Query: 346 EASYFDPVWSPQGDLIAFTKF--SGEKFAIG--VMKKDGSQERLLVED--SNLQAPTWSP 399
               + P     G ++ + ++  SG    I         +   L + D  SN   P  +P
Sbjct: 234 GLQTYYPTVRADG-MVYYARWKDSGGADQIYAKTADPASTPSALALNDCMSNNSDP--AP 290

Query: 400 -SGR-SLIFSRKKDGDTGSKLYSIDLN 424
            SG   L FS    G  G +LY  D+ 
Sbjct: 291 VSGTNYLFFSSTTAG--GYQLYVGDVT 315



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 56/137 (40%), Gaps = 11/137 (8%)

Query: 314 SQIVFESDR---EGKEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLIAFTKFSG 368
            ++V+ S     +G  QL++   +     ++S+         + V+SP G  +AF   S 
Sbjct: 56  GKLVYHSYVKYGDGTSQLFLYDFSAHTLTQLSKSAWGITDPMNGVFSPDGKWLAFMGISN 115

Query: 369 EKFAIGVMKKD-GSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             + + +++   G+    +      +  + P +S  G++L+F  K++GD      S    
Sbjct: 116 GAWNVFMLQLGAGTPPVNMTNSTGATRNEDPKFSTDGKTLVF--KQNGDVKQATLSYTSA 173

Query: 425 GRNETLINTPAYASDPQ 441
           G   T + +   A    
Sbjct: 174 GPVFTSVVSLTNAPAGA 190


>gi|320108949|ref|YP_004184539.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Terriglobus saanensis SP1PR4]
 gi|319927470|gb|ADV84545.1| peptidase S9B dipeptidylpeptidase IV domain protein [Terriglobus
           saanensis SP1PR4]
          Length = 716

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 55/362 (15%), Positives = 110/362 (30%), Gaps = 86/362 (23%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-------- 218
           +G +G      L         I   +L V D      R LT    +              
Sbjct: 95  SGRRGGERDPALSPDGKRAVFIRDWNLWVRDIASKQERQLTHDGVKDFGYATDNAGWKHT 154

Query: 219 ------FSPNQQKVAYATYDDEDILRVYLMDTRIDR-----------------APKRI-- 253
                 +SP+ + +A    D  +   +YL+ T +                     +R+  
Sbjct: 155 DKPIVVWSPDSKSIATFQQDQRNTGEMYLVSTVVGHPKLEAWKYPLPGDKDVTMIERVVV 214

Query: 254 ----GNFRSMILAPR--------------------FSSNGKRALI-SVQKDEAM-DIYSV 287
               G    + +AP                     +S +GK+    S  +D    ++   
Sbjct: 215 DAASGKVTRLKMAPDQHRSSLCDDISCFGGWEDVQWSEDGKQLAFLSTSRDHRQENLRIA 274

Query: 288 DLQSNATERLTNT-------LFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           D  +     +             + ++  Y   SS++++ S+R+   QLY+  +     K
Sbjct: 275 DPATGDVREVMQEKAATYFESGNDKVNWKYLAKSSEVLWFSERDNWGQLYLFDTATGKLK 334

Query: 340 -RISQDKEASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLVEDSNL 392
            +I+  +         +    ++ F               +  +  DGS  +LL  +   
Sbjct: 335 NQITHGEGNVTQVLHVNEDTRVVTFLGSGKEPGRDPYFVHLYTVNLDGSGLKLLTPEDAN 394

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR--------NETLINTPAYASDPQWVG 444
            A T +P GR  + +  +  D    +   D  G+        + T +    +   P  V 
Sbjct: 395 HAITLAPDGRHFVDAYSRP-DVPQVIVLRDNTGKIIAEIAHTDITRLKAAGWVP-P--VP 450

Query: 445 FM 446
           F+
Sbjct: 451 FV 452



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 78/287 (27%), Gaps = 83/287 (28%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRI------GNFRSMILAPRFSSNGKRALISV 276
              V          L  + MD       ++          R     P  S +GKRA+   
Sbjct: 58  GNGVVTWRERTGGKLSNFAMDVATGAKSEKTAPEGGASGRRGGERDPALSPDGKRAVFIR 117

Query: 277 QKDEAMDIYSVDLQSNATERLTNTL----FINISAS-----------YSPDSSQIV-FES 320
                 +++  D+ S    +LT+            +           +SPDS  I  F+ 
Sbjct: 118 D----WNLWVRDIASKQERQLTHDGVKDFGYATDNAGWKHTDKPIVVWSPDSKSIATFQQ 173

Query: 321 DREGKEQLY------------------------------VMQSNGSDQKRISQDKE---- 346
           D+    ++Y                              V+ +      R+    +    
Sbjct: 174 DQRNTGEMYLVSTVVGHPKLEAWKYPLPGDKDVTMIERVVVDAASGKVTRLKMAPDQHRS 233

Query: 347 ---------ASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLL--------V 387
                      + D  WS  G  +AF  T     +  + +        R +         
Sbjct: 234 SLCDDISCFGGWEDVQWSEDGKQLAFLSTSRDHRQENLRIADPATGDVREVMQEKAATYF 293

Query: 388 EDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLIN 432
           E  N +    +      +++  ++D     +LY  D   G+ +  I 
Sbjct: 294 ESGNDKVNWKYLAKSSEVLWFSERDN--WGQLYLFDTATGKLKNQIT 338


>gi|239612420|gb|EEQ89407.1| WD domain-containing protein [Ajellomyces dermatitidis ER-3]
          Length = 970

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 54/168 (32%), Gaps = 18/168 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  K+A           V + D        R+ +    +    +S +  +  IS  +
Sbjct: 630 FSRDGTKLATT----GRENIVIIYDVPTFSVIHRLTDHGGPVAYATWSPDDSKL-ISCSQ 684

Query: 279 DEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFES-DREGKEQLYVMQSNG 335
           D    ++  D+++     LT         SA+++P+    V  S DR+   QL      G
Sbjct: 685 DYKARLW--DVETGRCI-LTIDHHNEPVTSAAWAPNGDSFVTGSLDRQ--SQLCHWSVAG 739

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                     +    D   SP G  +           I V   +   E
Sbjct: 740 ESL--YKWSGQYRVRDCSISPDGRRLIAISTEK---KIYVYNFETRAE 782



 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 13/165 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G +   + +++    +   D+ + +   RLT+       A++SPD S+++  S   
Sbjct: 630 FSRDGTKLATTGREN---IVIIYDVPTFSVIHRLTDHGGPVAYATWSPDDSKLISCSQ-- 684

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +  +                       W+P GD          +  +      G   
Sbjct: 685 -DYKARLWDVETGRCILTIDHHNEPVTSAAWAPNGDSFVTGSLD-RQSQLCHWSVAGESL 742

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                   ++  + SP GR LI    +      K+Y  +   R E
Sbjct: 743 YKWSGQYRVRDCSISPDGRRLIAISTEK-----KIYVYNFETRAE 782



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/217 (12%), Positives = 71/217 (32%), Gaps = 16/217 (7%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG--EKGDFNSRILFVSESVVSG 187
           L D   + QI    + ++  S    +    D     +    E  +    + ++  S    
Sbjct: 576 LLDYVKQNQINQCLYHNTAESPSLYSDHQCDRSQFPLRTSLELSEHTDEVWYLEFSRDGT 635

Query: 188 I-----IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
                  +N + + D    ++ +        +    +SP+  K+   + D +      L 
Sbjct: 636 KLATTGRENIVIIYDVPTFSVIHRLTDHGGPVAYATWSPDDSKLISCSQDYK----ARLW 691

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    R    I +    + +  ++ NG    ++   D    +    +   +  +  +  +
Sbjct: 692 DVETGRCILTIDHHNEPVTSAAWAPNGDS-FVTGSLDRQSQLCHWSVAGESLYKW-SGQY 749

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                S SPD  +++  S     +++YV       ++
Sbjct: 750 RVRDCSISPDGRRLIAISTE---KKIYVYNFETRAEE 783


>gi|170067686|ref|XP_001868580.1| will die slowly [Culex quinquefasciatus]
 gi|167863783|gb|EDS27166.1| will die slowly [Culex quinquefasciatus]
          Length = 349

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 82/224 (36%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 50  YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 105

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L++   D+ + I+ +       + L          +++P S+ IV  S
Sbjct: 106 SDVAWSSD-SRLLVTASDDKTLKIWELS-SGKCLKTLKGHTNYVFCCNFNPQSNLIVSGS 163

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 164 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 218

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 219 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 259


>gi|158284471|ref|XP_307121.4| Anopheles gambiae str. PEST AGAP012731-PA [Anopheles gambiae str.
           PEST]
 gi|158301326|ref|XP_321036.4| AGAP002019-PA [Anopheles gambiae str. PEST]
 gi|157012417|gb|EAA01221.5| AGAP002019-PA [Anopheles gambiae str. PEST]
 gi|157021040|gb|EAA02931.4| AGAP012731-PA [Anopheles gambiae str. PEST]
          Length = 347

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 82/224 (36%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 48  YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 103

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L++   D+ + I+ +       + L          +++P S+ IV  S
Sbjct: 104 SDVAWSSD-SRLLVTASDDKTLKIWELS-SGKCLKTLKGHTNYVFCCNFNPQSNLIVSGS 161

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 162 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 216

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 217 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 257


>gi|146312938|ref|YP_001178012.1| oligogalacturonide lyase [Enterobacter sp. 638]
 gi|145319814|gb|ABP61961.1| Oligogalacturonide lyase [Enterobacter sp. 638]
          Length = 391

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 41/251 (16%), Positives = 83/251 (33%), Gaps = 29/251 (11%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F  +   + +A   D      YL+D     A +              S + K 
Sbjct: 36  NYFYQKCFFNDGSHLLFAGEFDGH-WNYYLLDLNKAEAVQLTEGAGDNTFGGFLSPDDKS 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTL----------------FINISAS-YSPDSS 314
                     +++    L      R+ +                   I I+ S ++P + 
Sbjct: 95  LYYVKNDRTLLEVNLETLAEREVYRVADDWVGYGTWVANSDCTKLVGIEIAKSDWTPLND 154

Query: 315 QIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF 371
             +F          +L  +     +   I ++K      P++ P   + +AF        
Sbjct: 155 WKIFHDFFHKGPHCRLLRVDLKTGESATIHEEKNW-LGHPIYRPFDDNTVAFCHEGPHDL 213

Query: 372 ---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN- 424
               + ++ +DGS  R +    E  +     W P+G +L++     G  G  +YS + + 
Sbjct: 214 VDARMWMVNEDGSNVRKVKEHAEGESCTHEFWVPNGSALVYVSYLKGQQGRTIYSFNPDT 273

Query: 425 GRNETLINTPA 435
           G NE ++  PA
Sbjct: 274 GVNEAVMQMPA 284



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 61/190 (32%), Gaps = 38/190 (20%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG+N+R +    +        + PN   + Y +
Sbjct: 197 PFDDNTVAFCHEGPHDLVDARMWMVNEDGSNVRKVKEHAEGESCTHEFWVPNGSALVYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM------- 282
           Y      R +Y  +         +       L   F  +G   L                
Sbjct: 257 YLKGQQGRTIYSFNPDTGVNEAVMQMPACSHLMSNF--DGS--LFVGDGSGTPVDVKDTS 312

Query: 283 --------DIYSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFES 320
                    +Y+ D+   A  R+      + S               S++PD   ++F S
Sbjct: 313 GYTIDNDPYLYAFDVAKKAHFRIARH---DTSWATVANSRQVTHPHPSFTPDDKAVLFSS 369

Query: 321 DREGKEQLYV 330
           D++GK  LY+
Sbjct: 370 DKDGKPALYI 379



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/235 (11%), Positives = 66/235 (28%), Gaps = 39/235 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           ++P      +  +  +      L           I   ++ +  P +   +        +
Sbjct: 149 WTPLNDWKIFHDFFHKGPHCRLLRVDLKTGESATIHEEKNWLGHPIYRPFDDNTVAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ V+   +   ++             + P+ S +V+ S  +G++   +Y 
Sbjct: 209 GPHDLVDARMWMVNEDGSNVRKVKEHAEGESCTHEFWVPNGSALVYVSYLKGQQGRTIYS 268

Query: 331 MQSNGSDQKRIS-----------QDKEASYFDPVWSP-------------QGDLIAFTKF 366
              +    + +             D      D   +P                L AF   
Sbjct: 269 FNPDTGVNEAVMQMPACSHLMSNFDGSLFVGDGSGTPVDVKDTSGYTIDNDPYLYAFDVA 328

Query: 367 SGEKFAIGVMK---KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
               F I          +  R +        P+++P  ++++FS  KDG     +
Sbjct: 329 KKAHFRIARHDTSWATVANSRQVTHP----HPSFTPDDKAVLFSSDKDGKPALYI 379



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 58/185 (31%), Gaps = 25/185 (13%)

Query: 288 DLQSN-ATERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           D  +     RLT               +  D S ++F  + +G    Y++  N ++  ++
Sbjct: 16  DPDTGVEITRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHWNYYLLDLNKAEAVQL 75

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAPT- 396
           ++    + F    SP    + + K       + +      +   + +D        A + 
Sbjct: 76  TEGAGDNTFGGFLSPDDKSLYYVKNDRTLLEVNLETLAEREVYRVADDWVGYGTWVANSD 135

Query: 397 -------------WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQW 442
                        W+P     IF          +L  +DL  G + T+     +   P +
Sbjct: 136 CTKLVGIEIAKSDWTPLNDWKIFHDFFHKGPHCRLLRVDLKTGESATIHEEKNWLGHPIY 195

Query: 443 VGFMD 447
             F D
Sbjct: 196 RPFDD 200


>gi|157167899|ref|XP_001662893.1| wd-repeat protein [Aedes aegypti]
 gi|108881510|gb|EAT45735.1| wd-repeat protein [Aedes aegypti]
          Length = 349

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 82/224 (36%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 50  YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 105

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L++   D+ + I+ +       + L          +++P S+ IV  S
Sbjct: 106 SDVAWSSD-SRLLVTASDDKTLKIWELS-SGKCLKTLKGHTNYVFCCNFNPQSNLIVSGS 163

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 164 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 218

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 219 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 259


>gi|115488384|ref|NP_001066679.1| Os12g0431300 [Oryza sativa Japonica Group]
 gi|77554873|gb|ABA97669.1| expressed protein [Oryza sativa Japonica Group]
 gi|113649186|dbj|BAF29698.1| Os12g0431300 [Oryza sativa Japonica Group]
 gi|125536449|gb|EAY82937.1| hypothetical protein OsI_38155 [Oryza sativa Indica Group]
 gi|125579178|gb|EAZ20324.1| hypothetical protein OsJ_35933 [Oryza sativa Japonica Group]
          Length = 777

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 83/249 (33%), Gaps = 60/249 (24%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-------------A 262
            P  S N +K+A+   + + +        R+    +   +  S                 
Sbjct: 422 FPSVSKNGKKLAFVDNEFKAVWLADGRGLRVVYKVRATKSVFSTSWNQNDDLDTLYVCEG 481

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS +    ++ +      ++   D ++  T  LT+  +     S + + +++VF S R
Sbjct: 482 PAFSIDKPVQIMRI-----PNVSREDYENMETFPLTDEEYNCAFPSTNAEGTKLVFRSSR 536

Query: 323 ----EGKEQ---LYVMQSNGSDQKRI--SQDKEASYFDPVWSPQG--DLIAFTK------ 365
                G+ Q   LY++ +   +   +    D   +     WSP+   D I F+       
Sbjct: 537 NRVAGGERQHKNLYIIDAEKGEAAGVVPLTDGPWTDTHCSWSPREGCDWIVFSSTGRPEK 596

Query: 366 --------------FSGEKFAIGVMKKDG-------SQERLL----VEDSNLQAPTWSPS 400
                              FA+ ++              R++        ++  P +SP 
Sbjct: 597 DIVKGKDEPEKDHGLDPGYFAVYLVNAKDIKKGEVPVPVRVIHSAPTIAGHINHPVFSPD 656

Query: 401 GRSLIFSRK 409
            +S++F+  
Sbjct: 657 MKSIVFAAD 665



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 53/157 (33%), Gaps = 34/157 (21%)

Query: 269 GKRALISV-------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV---F 318
           G   +          ++     +Y  DL    TERLT     ++S + SP    +    F
Sbjct: 154 GHSLVYVSTKAPVKARRTPWTVVYRTDLADGKTERLTPLGQYDLSPAVSPSGKMVAVANF 213

Query: 319 ESDREG------KEQLYVMQSNGSDQKR-----ISQDKEASYFDPVWSPQGDLIAFTK-- 365
           + +R        K  + VM  +   Q R     + +D       P W    ++I F +  
Sbjct: 214 QQNRWNGEIENLKTDIVVMNVDKRAQGRSDRKVLIKDG----GWPTWGSD-NVIFFHRGF 268

Query: 366 -----FSGEKFAIGVMK-KDGSQERLLVEDSNLQAPT 396
                 +  ++ +       G +ER+  E  +   P 
Sbjct: 269 DTTPPSNTARWGVFRFDIAAGKEERVTDESIDAMTPA 305



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 16/79 (20%)

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-------LYSIDLNGR---- 426
            DG  ERL        +P  SPSG+ +  +  +      +       +  ++++ R    
Sbjct: 182 ADGKTERLTPLGQYDLSPAVSPSGKMVAVANFQQNRWNGEIENLKTDIVVMNVDKRAQGR 241

Query: 427 --NETLINTPAYASDPQWV 443
              + LI    +   P W 
Sbjct: 242 SDRKVLIKDGGW---PTWG 257


>gi|168704903|ref|ZP_02737180.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 552

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 48/315 (15%), Positives = 109/315 (34%), Gaps = 35/315 (11%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR------KIAHTISDDIYQSITG 168
           +++  G   LRV  RLWD+   KQ+  +       +        +    +S+D       
Sbjct: 219 KLVATGNGGLRV--RLWDLPSGKQLHAENDRFPAPALMIGTTDGESLFLLSNDAAFLWPV 276

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP----------- 217
            + +  +R +    +V + +  ++L V   +G            +  +P           
Sbjct: 277 GRQEVKARGVLPGPAVAAAVGGSTLLVATAEGVVAYSEFDPMKPLAAKPTRAFDKSAQAR 336

Query: 218 --RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               +P+  ++A+A     D     ++   +     R+    S +LA  FS +G +    
Sbjct: 337 AVAVAPDGHRIAWA-----DSSGAVVLADLMGDERTRLPLVTSSVLALAFSPDGTKLA-Q 390

Query: 276 VQKDEAMDIYSVDLQSN---ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +D  + ++ V+ +        +      +  + ++SPD  ++V  + R       V  
Sbjct: 391 FGRDGFLRLWPVNGKGRPADEVWKARVGRGLRATIAFSPDG-KLVTAASRAQVPIFSV-- 447

Query: 333 SNGSDQ-KRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++GS+  K     +E       +S    L+   T  +     +  + +     R L    
Sbjct: 448 ADGSEVFKTDRHSEEGLAQHVAFSTDSRLLIIGTSGTAGGVEVWDVARRRLARRFLTGYG 507

Query: 391 NLQAPTWSPSGRSLI 405
           ++      P G  + 
Sbjct: 508 DISRLCVFPDGNRIA 522



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 55/164 (33%), Gaps = 17/164 (10%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVF 318
           + A +++ +GK+  +    +  + +    L       +        +  ++S +   +  
Sbjct: 9   VSAVQYTKSGKQLAVHYTAEHLIRL----LDPGTLREIDTVACTGTNRFAFSANGKLLA- 63

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
               +G   L + +      K      +   F     P G  IA     G    +     
Sbjct: 64  --TNDGSGNLVITEVELELPKLELTGTDVFAFR----PDGKAIAVGNHDGT---VAAHLI 114

Query: 379 DGSQERL-LVEDSNLQAPTWSPSGRSLIF-SRKKDGDTGSKLYS 420
            G +  L L      +  ++SP G+ L   SR  DG    ++Y+
Sbjct: 115 TGGKRTLHLAGKDRARGVSYSPDGKRLAVGSRAADGTDTVRVYT 158



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/157 (12%), Positives = 46/157 (29%), Gaps = 15/157 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F P+ + +A   +D                        +       +S +GKR  +  +
Sbjct: 92  AFRPDGKAIAVGNHDG-----TVAAHLITGGKRTLHLAGKDRARGVSYSPDGKRLAVGSR 146

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             +  D  +V + ++    ++    +N+  ++  +    V      G   L         
Sbjct: 147 AADGTD--TVRVYTDRAALVSEVPEMNVPLAWLTNDRLAVSNGTDAGIYDL--------A 196

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +   +     +      SP G  +  T   G +  + 
Sbjct: 197 KNAFTAKIRGAAGSVAISPDGSKLVATGNGGLRVRLW 233


>gi|62896711|dbj|BAD96296.1| WD SOCS-box protein 1 isoform 1 variant [Homo sapiens]
          Length = 421

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 71/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  + +        +SP 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC---SVGASKAVFLWNMDKYTMIRKLEGRHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 268 GALLATASYDT---RVYIWDPHNGD--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 322

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 323 GLHVA---SLADDKMVRFWRIDED 343



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 80/259 (30%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++           R +  T + D               ++ VS S   
Sbjct: 151 RIKIWDVYTGKLLL--NLVDHTEVVRDL--TFAPD-------------GSLILVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L +   
Sbjct: 194 TL---RVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSMLCSV----GASKAVFLWNMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + I+  D  +               
Sbjct: 246 YTMIRKLEGRHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFPPPT 302

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   +   +D +   + + +  +     +++          
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 357

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 358 AFSTDGSVLAAGTHDGSVY 376



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 33/99 (33%), Gaps = 4/99 (4%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 149 NGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 208

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +L    N   +  +SP    L             L+++D
Sbjct: 209 VLRGHQNWVYSCAFSPDSSML---CSVGASKAVFLWNMD 244


>gi|289666432|ref|ZP_06488013.1| shikimate 5-dehydrogenase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 293

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 72/214 (33%), Gaps = 25/214 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEA---MDIYSVDLQSNA---TERLTNTLFIN-I 305
           + +  +       S +G+R + +  +       D++   L++        L      +  
Sbjct: 33  VISTPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRAGRWQDARPLPINTAQDET 92

Query: 306 SASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSP 356
           +  +S D   ++F S R    G   LY    +       +Q      +   +   P  S 
Sbjct: 93  TPLFSADGRWLLFASTRPAGAGGSDLYRAPVDAQGAVGAAQSLGTAINSAGNERAPTLSL 152

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDG---SQERLLVE---DSNLQAPTWSPSGRSLIFS 407
            G  + F            + V + DG   S    LV+    ++     W   GR+L+++
Sbjct: 153 NGTRLLFASDGHGGAGGMDLFVARWDGEAFSAPAALVDINSAADELDAAWLGDGRALVWA 212

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R K       L ++  +G     +  P   + PQ
Sbjct: 213 RGKTDGPSQLLLAVCKDGHFAQGVPLPLSFNRPQ 246



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 58/170 (34%), Gaps = 24/170 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG------SDQKRISQDKEASYFDP 352
           +T      A+ SPD  +IV+ SDR G    + +           D + +  +       P
Sbjct: 35  STPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLRAGRWQDARPLPINTAQDETTP 94

Query: 353 VWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQE--------RLLVEDSNLQAPTWSPSG 401
           ++S  G  + F            +     D              +    N +APT S +G
Sbjct: 95  LFSADGRWLLFASTRPAGAGGSDLYRAPVDAQGAVGAAQSLGTAINSAGNERAPTLSLNG 154

Query: 402 RSLIFSRK-KDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
             L+F+     G  G  L+    +G   +       IN+ A   D  W+G
Sbjct: 155 TRLLFASDGHGGAGGMDLFVARWDGEAFSAPAALVDINSAADELDAAWLG 204



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 63/168 (37%), Gaps = 22/168 (13%)

Query: 220 SPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ Q++ +A+         D+ +  L   R   A     N       P FS++G+  L 
Sbjct: 46  SPDGQRIVWASDRAGGAGGWDLWQAQLRAGRWQDARPLPINTAQDETTPLFSADGRWLLF 105

Query: 275 SVQKD---EAMDIYSVDLQS----NATERL---TNTLFINISASYSPDSSQIVFESD--- 321
           +  +       D+Y   + +     A + L    N+     + + S + ++++F SD   
Sbjct: 106 ASTRPAGAGGSDLYRAPVDAQGAVGAAQSLGTAINSAGNERAPTLSLNGTRLLFASDGHG 165

Query: 322 REGKEQLYVMQSNGS----DQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             G   L+V + +G         +  +  A   D  W   G  + + +
Sbjct: 166 GAGGMDLFVARWDGEAFSAPAALVDINSAADELDAAWLGDGRALVWAR 213



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 16/142 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIG- 254
            + R L  +  Q    P FS + + + +A+         D+ R  +       A + +G 
Sbjct: 78  QDARPLPINTAQDETTPLFSADGRWLLFASTRPAGAGGSDLYRAPVDAQGAVGAAQSLGT 137

Query: 255 --NFRSMILAPRFSSNGKRALISVQKDEAM---DIYSVDLQS---NATERL--TNTLFIN 304
             N      AP  S NG R L +          D++         +A   L   N+    
Sbjct: 138 AINSAGNERAPTLSLNGTRLLFASDGHGGAGGMDLFVARWDGEAFSAPAALVDINSAADE 197

Query: 305 ISASYSPDSSQIVFESDREGKE 326
           + A++  D   +V+   +    
Sbjct: 198 LDAAWLGDGRALVWARGKTDGP 219


>gi|284037734|ref|YP_003387664.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
 gi|283817027|gb|ADB38865.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Spirosoma linguale DSM 74]
          Length = 811

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 68/186 (36%), Gaps = 18/186 (9%)

Query: 210 RDQILFEPRFSPNQQK--VAYATYDDEDILRVYLM----DTRIDRAPKRIGNFRSMILAP 263
           R   +  P +S + +   V   + D++D   + L        +              +  
Sbjct: 342 RPVAISSPVWSEDSKFCVVVVRSLDNKDRWIMRLQPETLKLSLLDRQHEDTWIGGPGIGS 401

Query: 264 RFSS-------NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           + S        + +      + D    +Y+V++ +   ++LT+  F       S D    
Sbjct: 402 QNSPGSMGFLGDNQTLWFQSEADGYSHLYTVNVLTGEKKQLTSGKFEVQQIQLSKDKKHF 461

Query: 317 VFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAI 373
             +++    G++  Y M  +G ++ R++    A+  D   SP    +A     S + + +
Sbjct: 462 YLQTNEVHPGEQHFYRMAVSGGERTRLTNMTGAN--DVTLSPDETRMAIRYSSSNQPWEL 519

Query: 374 GVMKKD 379
            VM+ +
Sbjct: 520 YVMEIN 525



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 62/182 (34%), Gaps = 19/182 (10%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER----------LTNTLFINISAS- 308
           I +P +S + K  ++ V+  +  D + + LQ    +                 I    S 
Sbjct: 346 ISSPVWSEDSKFCVVVVRSLDNKDRWIMRLQPETLKLSLLDRQHEDTWIGGPGIGSQNSP 405

Query: 309 ----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIA 362
               +  D+  + F+S+ +G   LY +     ++K+++  K         S       + 
Sbjct: 406 GSMGFLGDNQTLWFQSEADGYSHLYTVNVLTGEKKQLTSGKF-EVQQIQLSKDKKHFYLQ 464

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +    +     M   G +   L   +     T SP    +   R    +   +LY ++
Sbjct: 465 TNEVHPGEQHFYRMAVSGGERTRLTNMTGANDVTLSPDETRMA-IRYSSSNQPWELYVME 523

Query: 423 LN 424
           +N
Sbjct: 524 IN 525



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 79/227 (34%), Gaps = 28/227 (12%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQ------KVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           G +      S D       ++P++       KV + +          L      +  K  
Sbjct: 42  GTSPSNPFWSDDSKTLYFNWNPDRTLGDSLYKVTFTSLVPRSGRTRLL---AASQPVKVS 98

Query: 254 GNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
              R  + AP  S+       + +  D   D++ +DL+  +  +LTNT+ +    ++S D
Sbjct: 99  PTERRALPAPPVSA--FNLAYTQRVFDRQGDLFLLDLKFGSVRQLTNTVEVETDPTFSGD 156

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFS---- 367
             Q++F   R     L+ +        +++  K  S   D   + +   +   +      
Sbjct: 157 QKQVIF---RRSGSNLFSIDLKTGQLTQLTDFKPGSKKADTKLTDEEKFLKQDQLRLSSV 213

Query: 368 --------GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                    E   I    +    + + ++D  L  PT SP GR + +
Sbjct: 214 LKERKEKKDEADRISKADQPKRPKEIYLDDKTLVNPTLSPDGRFVTY 260



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 20/142 (14%)

Query: 306 SASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL--- 360
           +  +S DS  + F    DR   + LY +       +       A+      SP       
Sbjct: 47  NPFWSDDSKTLYFNWNPDRTLGDSLYKVTFTSLVPRSGRTRLLAASQPVKVSPTERRALP 106

Query: 361 --------IAFTKFS-GEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKK 410
                   +A+T+     +  + ++       R L     ++  PT+S   + +IF R  
Sbjct: 107 APPVSAFNLAYTQRVFDRQGDLFLLDLKFGSVRQLTNTVEVETDPTFSGDQKQVIFRRS- 165

Query: 411 DGDTGSKLYSIDLNGRNETLIN 432
               GS L+SIDL     T + 
Sbjct: 166 ----GSNLFSIDLKTGQLTQLT 183


>gi|256828376|ref|YP_003157104.1| hypothetical protein Dbac_0564 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577552|gb|ACU88688.1| conserved hypothetical protein [Desulfomicrobium baculatum DSM
           4028]
          Length = 420

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 69/179 (38%), Gaps = 22/179 (12%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             M  DG   + +       +++ +FSP+  K+A           + +  T  +      
Sbjct: 253 WGMALDG---KIIWQPSFFQVWQQQFSPSGDKLAAIVCPKYGRWTLAVDGTPWN------ 303

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             F  M++   FS +GKR     ++D    ++S D   N      +   +  +  +SPDS
Sbjct: 304 TTFGDMVMDMTFSPDGKRLAALGKQDGKWTVFSDDKAWN------SNYDMCYAPVFSPDS 357

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           + +    +++G+   + +  +G +  +         FDP +SP G  I        K+ 
Sbjct: 358 NHVAVRVEKKGR---FTIAVDGKEYGQ----GFDQCFDPTFSPDGSRILIRAIVDGKYQ 409



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 16/149 (10%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G +    V         +VD         T    + +  ++SPD  ++     ++G
Sbjct: 275 FSPSGDKLAAIVCPKYGRWTLAVD---GTPWN-TTFGDMVMDMTFSPDGKRLAALGKQDG 330

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           K  ++                    + PV+SP  + +A       +F I V   DG +  
Sbjct: 331 KWTVFSDDKA-------WNSNYDMCYAPVFSPDSNHVAVRVEKKGRFTIAV---DGKEYG 380

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
              +      PT+SP G  ++     DG 
Sbjct: 381 QGFDQ--CFDPTFSPDGSRILIRAIVDGK 407



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 29/214 (13%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++ PRF+ +   VA         +R  L D  I    K      + +  P F        
Sbjct: 192 VWTPRFNADNSSVA-------AQIRHTLFDYTIAVDGKPWAENFNQVWEPLFHPAKNSVA 244

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             V+       + + L      +   + F      +SP   ++        K   + +  
Sbjct: 245 APVRLAGK---WGMALDGKIIWQ--PSFFQVWQQQFSPSGDKLAAIVCP--KYGRWTLAV 297

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +G+     +   +    D  +SP G  +A       K+ +       S ++    + ++ 
Sbjct: 298 DGTPWN--TTFGDM-VMDMTFSPDGKRLAALGKQDGKWTVF------SDDKAWNSNYDMC 348

Query: 394 -APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            AP +SP    +    +K G      ++I ++G+
Sbjct: 349 YAPVFSPDSNHVAVRVEKKGR-----FTIAVDGK 377



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 25/79 (31%), Gaps = 8/79 (10%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            S   + + P FSP+   VA    + +    + +         K  G        P FS 
Sbjct: 342 NSNYDMCYAPVFSPDSNHVA-VRVEKKGRFTIAV-------DGKEYGQGFDQCFDPTFSP 393

Query: 268 NGKRALISVQKDEAMDIYS 286
           +G R LI    D       
Sbjct: 394 DGSRILIRAIVDGKYQRIV 412



 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 16/158 (10%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            +  PRF+++       ++        +VD      +             + P  + +  
Sbjct: 191 NVWTPRFNADNSSVAAQIRHTLFDYTIAVDG-----KPWAENFNQVWEPLFHPAKNSVAA 245

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGVMK 377
                GK   + M  +G   K I Q      +   +SP GD +A        ++ + V  
Sbjct: 246 PVRLAGK---WGMALDG---KIIWQPSFFQVWQQQFSPSGDKLAAIVCPKYGRWTLAV-- 297

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            DG+       D  +   T+SP G+ L    K+DG   
Sbjct: 298 -DGTPWNTTFGDMVMDM-TFSPDGKRLAALGKQDGKWT 333


>gi|254249995|ref|ZP_04943315.1| Coagulation factor 5/8 type [Burkholderia cenocepacia PC184]
 gi|124876496|gb|EAY66486.1| Coagulation factor 5/8 type [Burkholderia cenocepacia PC184]
          Length = 487

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 86/267 (32%), Gaps = 23/267 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYD 232
           +  L     V  G   + L + D     +  L+ S   I       FSP+ + +A+    
Sbjct: 62  TGKLVYHSYVKYGDGTSQLFLYDFSAHTLMQLSKSTWGITDPMNGVFSPDGKWLAFMGIS 121

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +     V+++       P  + N         P+FS++GK  +     D      S    
Sbjct: 122 NG-AWNVFMLQLGAGTPPVNMTNSTGATRNEDPKFSTDGKTLVFKQNGDVKQATLSYTSA 180

Query: 291 S---NATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                +   LTN            +PD+S + + +       L              +  
Sbjct: 181 GPVFTSVVSLTNAPAGAEYSMPFLAPDASAVYYATGTGSNMGLMKRTIATGATAVFDRPA 240

Query: 346 EASYFDPVWSPQGDLIAFTKF--SGEKFAIG--VMKKDGSQERLLVED--SNLQAPTWSP 399
               + P     G ++ + ++  SG    I         +   L + D  SN   P  +P
Sbjct: 241 GLQTYYPTVRADG-MVYYARWKDSGGADQIYAKTADPASTPSALALNDCMSNNSDP--AP 297

Query: 400 -SGR-SLIFSRKKDGDTGSKLYSIDLN 424
            SG   L FS    G  G +LY  D+ 
Sbjct: 298 VSGTNYLFFSSTTAG--GYQLYVGDVT 322



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 56/137 (40%), Gaps = 11/137 (8%)

Query: 314 SQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSG 368
            ++V+ S     +G  QL++   +     ++S+         + V+SP G  +AF   S 
Sbjct: 63  GKLVYHSYVKYGDGTSQLFLYDFSAHTLMQLSKSTWGITDPMNGVFSPDGKWLAFMGISN 122

Query: 369 EKFAIGVMKKD-GSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             + + +++   G+    +      +  + P +S  G++L+F  K++GD      S    
Sbjct: 123 GAWNVFMLQLGAGTPPVNMTNSTGATRNEDPKFSTDGKTLVF--KQNGDVKQATLSYTSA 180

Query: 425 GRNETLINTPAYASDPQ 441
           G   T + +   A    
Sbjct: 181 GPVFTSVVSLTNAPAGA 197


>gi|124004937|ref|ZP_01689780.1| peptidoglycan-associated cytoplasmic membrane protein, putative
           [Microscilla marina ATCC 23134]
 gi|123989615|gb|EAY29161.1| peptidoglycan-associated cytoplasmic membrane protein, putative
           [Microscilla marina ATCC 23134]
          Length = 693

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 77/224 (34%), Gaps = 27/224 (12%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKD 279
            +   Y  +  EDI   Y  + +   APK++    N ++   +  FS +GK   +  + +
Sbjct: 215 GKNDPYDHHPYEDIYITYRSNGKWS-APKQLSQSINTKTHDASLGFSPDGKMLFLYRKGN 273

Query: 280 EAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLY------- 329
             +   + D   ++ + L    N+ +   S S + D+  I F S+R G    +       
Sbjct: 274 IYVSSLANDGNWSSPKPLKGKINSKYQETSFSIAHDAQTIYFSSNRPGGYGGFDIYRSQL 333

Query: 330 VMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGS 381
              S       +  + +   +   P  S  G  + F+            F    +    +
Sbjct: 334 QADSTWGSPVNLGSTINTRYNEESPFISLDGKTLYFSSTGHSTMGKHDVFESTWVDASWT 393

Query: 382 QERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYS 420
             R L        +      S  G++  ++  + G  G   LYS
Sbjct: 394 PARNLGYPINSTGDDICFILSADGQTAYYASDRKGGLGKLDLYS 437



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 17/125 (13%)

Query: 218 RFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNG 269
             + + Q + +++         DI R  L       +P  +G   N R    +P  S +G
Sbjct: 305 SIAHDAQTIYFSSNRPGGYGGFDIYRSQLQADSTWGSPVNLGSTINTRYNEESPFISLDG 364

Query: 270 KRALISVQ------KDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFES 320
           K    S        K +  +   VD        L    N+   +I    S D     + S
Sbjct: 365 KTLYFSSTGHSTMGKHDVFESTWVDASWTPARNLGYPINSTGDDICFILSADGQTAYYAS 424

Query: 321 DREGK 325
           DR+G 
Sbjct: 425 DRKGG 429


>gi|50547865|ref|XP_501402.1| YALI0C03520p [Yarrowia lipolytica]
 gi|49647269|emb|CAG81701.1| YALI0C03520p [Yarrowia lipolytica]
          Length = 516

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 75/223 (33%), Gaps = 16/223 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           ++       ++   FS   + +A  + D      + + +     A KR+    S  +   
Sbjct: 217 HVLEGHSHEVWNLEFSHCGKFLASVSCDK----SIIIWNLDTYTAEKRLQGHSSAPVMAL 272

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDRE 323
           +S +    ++S  +D+   ++  + ++     +   +  +  S ++ PD  + +  S  +
Sbjct: 273 WSPD-DSMILSGSQDKTARLW--NAKTGEQIHVFEGIHAHTVSCAWLPDGKRFI-TSCAD 328

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               +     + ++  R     +        SP G  +      G      V      +E
Sbjct: 329 DATMILWSAEDCTEVHR----WKYKAIHAAVSPDGKRLVAVGGPGPAHNFVVFDLVTFEE 384

Query: 384 RLLVEDSN-LQAPTWSPSGRS--LIFSRKKDGDTGSKLYSIDL 423
              V  S    + + S   R   + F   K GD   +L   D+
Sbjct: 385 VAEVATSQKTTSVSISADSRYALINFMGPKTGDGVHELQLWDI 427



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 60/202 (29%), Gaps = 16/202 (7%)

Query: 133 VKDRKQIIGKKFFSSPASWR-KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           V  ++  + + +   P  +  +++H +    ++        +N       + + S     
Sbjct: 193 VPQQQMSLFEDYKGQPDLFPDRVSHVLEGHSHE-------VWNLEFSHCGKFLASVSCDK 245

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           S+ + + D                   +SP+   +   + D        L + +      
Sbjct: 246 SIIIWNLDTYTAEKRLQGHSSAPVMALWSPDDSMILSGSQDK----TARLWNAKTGEQIH 301

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                 +  ++  +  +GKR  I+   D+A  I           R      I   A+ SP
Sbjct: 302 VFEGIHAHTVSCAWLPDGKR-FITSCADDATMILWSAEDCTEVHRW-KYKAI--HAAVSP 357

Query: 312 DSSQIVFESDREGKEQLYVMQS 333
           D  ++V            V   
Sbjct: 358 DGKRLVAVGGPGPAHNFVVFDL 379


>gi|83816974|ref|NP_062627.3| WD repeat and SOCS box-containing protein 1 isoform 1 [Mus
           musculus]
 gi|20532277|sp|O54927|WSB1_MOUSE RecName: Full=WD repeat and SOCS box-containing protein 1;
           Short=WSB-1
 gi|2766489|gb|AAB96647.1| WSB-1 [Mus musculus]
 gi|56237878|emb|CAI25778.1| WD repeat and SOCS box-containing 1 [Mus musculus]
 gi|74139409|dbj|BAE40846.1| unnamed protein product [Mus musculus]
 gi|74145075|dbj|BAE27409.1| unnamed protein product [Mus musculus]
 gi|74151808|dbj|BAE29692.1| unnamed protein product [Mus musculus]
 gi|74189100|dbj|BAE39310.1| unnamed protein product [Mus musculus]
 gi|74191319|dbj|BAE39483.1| unnamed protein product [Mus musculus]
 gi|74204815|dbj|BAE35469.1| unnamed protein product [Mus musculus]
 gi|74219335|dbj|BAE26797.1| unnamed protein product [Mus musculus]
 gi|74219498|dbj|BAE29522.1| unnamed protein product [Mus musculus]
 gi|148683657|gb|EDL15604.1| WD repeat and SOCS box-containing 1, isoform CRA_b [Mus musculus]
          Length = 421

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 67/199 (33%), Gaps = 18/199 (9%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   M+    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWDLKDDGNMVKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPD S +         + +++   +     R  +          +SP 
Sbjct: 211 RAHQNWVYSCAFSPDCSMLC---SVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKD-----GSQERLLV-------EDSNLQAPTWSPSGRSLI 405
           G L+A   +    +       D     G               D  ++A ++S  G  + 
Sbjct: 268 GALLATASYDTRVYVWDPHNGDLLMEFGHLFPSPTPIFAGGANDRWVRAVSFSHDGLHVA 327

Query: 406 FSRKKDGDTGSKLYSIDLN 424
                  D   + + ID +
Sbjct: 328 ---SLADDKMVRFWRIDED 343



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L + + +    +++PD S ++  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K +   +   Y    +SP   ++     S   F +  M K     +L     
Sbjct: 200 LKDDGNMVKVLRAHQNWVY-SCAFSPDCSMLCSVGASKAVF-LWNMDKYTMIRKLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 258 DVVACDFSPDGALLATASY 276


>gi|327355222|gb|EGE84079.1| WD domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
          Length = 946

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 54/168 (32%), Gaps = 18/168 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  K+A           V + D        R+ +    +    +S +  +  IS  +
Sbjct: 630 FSRDGTKLATT----GRENIVIIYDVPTFSVIHRLTDHGGPVAYATWSPDDSKL-ISCSQ 684

Query: 279 DEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFES-DREGKEQLYVMQSNG 335
           D    ++  D+++     LT         SA+++P+    V  S DR+   QL      G
Sbjct: 685 DYKARLW--DVETGRCI-LTIDHHNEPVTSAAWAPNGDSFVTGSLDRQ--SQLCHWSVAG 739

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                     +    D   SP G  +           I V   +   E
Sbjct: 740 ESL--YKWSGQYRVRDCSISPDGRRLIAISTEK---KIYVYNFETRAE 782



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 13/165 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G +   + +++    +   D+ + +   RLT+       A++SPD S+++  S   
Sbjct: 630 FSRDGTKLATTGREN---IVIIYDVPTFSVIHRLTDHGGPVAYATWSPDDSKLISCSQ-- 684

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +  +                       W+P GD          +  +      G   
Sbjct: 685 -DYKARLWDVETGRCILTIDHHNEPVTSAAWAPNGDSFVTGSLD-RQSQLCHWSVAGESL 742

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                   ++  + SP GR LI    +      K+Y  +   R E
Sbjct: 743 YKWSGQYRVRDCSISPDGRRLIAISTEK-----KIYVYNFETRAE 782



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/217 (12%), Positives = 71/217 (32%), Gaps = 16/217 (7%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG--EKGDFNSRILFVSESVVSG 187
           L D   + QI    + ++  S    +    D     +    E  +    + ++  S    
Sbjct: 576 LLDYVKQNQINQCLYHNTAESPSLYSDHQCDRSQFPLRTSLELSEHTDEVWYLEFSRDGT 635

Query: 188 I-----IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
                  +N + + D    ++ +        +    +SP+  K+   + D +      L 
Sbjct: 636 KLATTGRENIVIIYDVPTFSVIHRLTDHGGPVAYATWSPDDSKLISCSQDYK----ARLW 691

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    R    I +    + +  ++ NG    ++   D    +    +   +  +  +  +
Sbjct: 692 DVETGRCILTIDHHNEPVTSAAWAPNGDS-FVTGSLDRQSQLCHWSVAGESLYKW-SGQY 749

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                S SPD  +++  S     +++YV       ++
Sbjct: 750 RVRDCSISPDGRRLIAISTE---KKIYVYNFETRAEE 783


>gi|324008056|gb|EGB77275.1| hypothetical protein HMPREF9532_02249 [Escherichia coli MS 57-2]
          Length = 416

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 71/203 (34%), Gaps = 41/203 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA----LISVQKDEAMDIYSVDL-------------QSNATE 295
           +GN     +    S  G++     ++ + KDEA    + D              +     
Sbjct: 223 VGNHALAFIGDTLSPKGEKVPELFIVELPKDEAGWKAAGDAPLSGTETTLPAPPRGVVQR 282

Query: 296 RLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT  +        N+   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 283 RLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 342

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I        +   L E      +  A  +SP G
Sbjct: 343 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDG 398

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN 424
           + L +          +L+  + +
Sbjct: 399 QWLAWMED------GQLWITETD 415



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 415



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 5/104 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            ++   +   N  S   A  FS +G+       +D  + I   D
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW--MEDGQLWITETD 415


>gi|295673444|ref|XP_002797268.1| WD repeat domain 5B [Paracoccidioides brasiliensis Pb01]
 gi|226282640|gb|EEH38206.1| WD repeat domain 5B [Paracoccidioides brasiliensis Pb01]
          Length = 505

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 74/211 (35%), Gaps = 20/211 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +++       +   +FSP+   +A  + D      + + DT   R         + I
Sbjct: 151 YKEKFILQGHQLGVSAVKFSPDGSMIASCSSD----ATIKIWDTTTGRLIHTFEGHLAGI 206

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIV 317
               ++ +G     S   D+++ ++ V   +        L +  +I  S ++SP  + +V
Sbjct: 207 STISWNPDGALIA-SGSDDKSIRLWHVP--TGKPHPNPFLGHHNYI-YSIAFSPKGNMLV 262

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S     E +Y+     +   R                 G L+      G    I +  
Sbjct: 263 SGSY---DEAVYLWDVRSARVMRSLPAHSDPVAGVDVVRDGTLVVSCASDG---LIRIWD 316

Query: 378 KDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
               Q  R LV + N  + A  +SP+G+ ++
Sbjct: 317 TATGQCLRTLVHEDNPPVSAVKFSPNGKYVL 347



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 10/134 (7%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG    S+ +     G             ++   FSP    +   +YD+     VYL D 
Sbjct: 220 SGSDDKSIRLWHVPTGKPHPNPFLGHHNYIYSIAFSPKGNMLVSGSYDE----AVYLWDV 275

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFI 303
           R  R  + +      +       +G   ++S   D  + I+  D  +      L +    
Sbjct: 276 RSARVMRSLPAHSDPVAGVDVVRDGT-LVVSCASDGLIRIW--DTATGQCLRTLVHEDNP 332

Query: 304 NISAS-YSPDSSQI 316
            +SA  +SP+   +
Sbjct: 333 PVSAVKFSPNGKYV 346


>gi|168702236|ref|ZP_02734513.1| serine/threonine protein kinase [Gemmata obscuriglobus UQM 2246]
          Length = 614

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 75/261 (28%), Gaps = 21/261 (8%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G    R   V+           L     DG  +  +        F     P+    A   
Sbjct: 366 GFTRDRKHLVTFRG--DREDRVLIRSLPDGGELAVVDARIGDSRFW-AVGPDASWFAVVD 422

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---SVQKDEAMDIYSV 287
              +    V L+D        ++ N    I     S +G+   +    + +  +  +  +
Sbjct: 423 L-PKPHKCVRLLDVATGEERFQL-NVAENIACITSSPDGRALAVGLIDLARGGSNKVLLL 480

Query: 288 D-LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D +       L        + +YS D   +           + +      +  R     E
Sbjct: 481 DTITGARLSSLPIQKRPPTALAYSDDGRLLA----VGFNGVIQIWDVASRELLRTITGFE 536

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSL 404
            +     +SP  + IA     G    + V  +    +  L+E     ++   +SP+G+ L
Sbjct: 537 RAVVCLAFSPDANRIAAGTPDGS---VWVWHRASGLQTQLIESGGRGVRTVAFSPNGKHL 593

Query: 405 IFSRKKDGDTGSKLYSIDLNG 425
                        ++ I L G
Sbjct: 594 A---TVANGAPVAVWDIKLTG 611


>gi|74204384|dbj|BAE39945.1| unnamed protein product [Mus musculus]
          Length = 421

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 67/199 (33%), Gaps = 18/199 (9%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   M+    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWDLKDDGNMVKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPD S +         + +++   +     R  +          +SP 
Sbjct: 211 RAHQNWVYSCAFSPDCSMLC---SVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKD-----GSQERLLV-------EDSNLQAPTWSPSGRSLI 405
           G L+A   +    +       D     G               D  ++A ++S  G  + 
Sbjct: 268 GALLATASYDTRVYVWDPHNGDLLMEFGHLFPSPTPIFAGGANDRWVRAVSFSHDGLHVA 327

Query: 406 FSRKKDGDTGSKLYSIDLN 424
                  D   + + ID +
Sbjct: 328 ---SLADDKMVRFWRIDED 343



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L + + +    +++PD S ++  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K +   +   Y    +SP   ++     S   F +  M K     +L     
Sbjct: 200 LKDDGNMVKVLRAHQNWVY-SCAFSPDCSMLCSVGASKAVF-LWNMDKYTMIRKLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 258 DVVACDFSPDGALLATASY 276


>gi|312962126|ref|ZP_07776620.1| hypothetical protein PFWH6_4046 [Pseudomonas fluorescens WH6]
 gi|311283618|gb|EFQ62205.1| hypothetical protein PFWH6_4046 [Pseudomonas fluorescens WH6]
          Length = 453

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 74/216 (34%), Gaps = 28/216 (12%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPR---FSSNGKRALISVQK 278
            + AYA     D +  Y  D            F S+     PR   FS+NGK   +  + 
Sbjct: 237 NRFAYAGNLGTDHVLQYRFDANTGALTPIGTGFVSVPANTGPRHLAFSANGKYLYVVGEM 296

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              +  +++D  + A  ++     I       P    +     R+ +             
Sbjct: 297 SGTVTAFAIDDSTGALTQVGVANGI-------PARLNLAHGEVRDARNN----DLKDDPT 345

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQA 394
            RI         D   SP G L+  ++ +    +   +       R L    V +   + 
Sbjct: 346 PRIW------AADLRLSPDGKLLLMSERTSSSVSAFAVDTATGGLRFLDNYPVAEKQPRN 399

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             +SP+G+ L+ + +K    G+  Y++  NG  + +
Sbjct: 400 IAFSPNGQWLLVTGEKSDTVGA--YAVSANGALKRV 433



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 70/236 (29%), Gaps = 27/236 (11%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQ-KDEAMD 283
            AY +   + ++  Y +D                 + P   S +GK    +++ K   + 
Sbjct: 104 FAYISSPGDGLISQYRLDESNGALSLVEQVTAGDQVNPMALSPDGKTLFAALRVKPFQVQ 163

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            +S+D  S      +     +  A  + D +     +   G + L V   + ++   I  
Sbjct: 164 AFSIDPASGHLTPTSKAPLADSMAYLATDRAGRYLLAASYGADLLSVQPVDKAEP--ILT 221

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLLVEDSNLQAP------- 395
            K   +   + +   +  A+    G    +      +      +     +  P       
Sbjct: 222 YKTGLHAHSLRTDPSNRFAYAGNLGTDHVLQYRFDANTGALTPI-GTGFVSVPANTGPRH 280

Query: 396 -TWSPSGRSLIFSRKKDGDTGSKLYSID-----------LNGRNETLINTPAYASD 439
             +S +G+ L    +  G   +  ++ID            NG    L        D
Sbjct: 281 LAFSANGKYLYVVGEMSGTVTA--FAIDDSTGALTQVGVANGIPARLNLAHGEVRD 334


>gi|300784820|ref|YP_003765111.1| hypothetical protein AMED_2915 [Amycolatopsis mediterranei U32]
 gi|299794334|gb|ADJ44709.1| WD-40 repeat-containing protein [Amycolatopsis mediterranei U32]
          Length = 1269

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 11/184 (5%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    ++ +    G +   +       +    FS + + +A           V L +   
Sbjct: 736 GGSDGAVRIWKAVGDDQPTVLRGPAGWVLGVAFSRDGKWLA----GGGADGTVRLWNLAD 791

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             +P  +G     + A  FS +G   + S   D  + +  +   + A         I + 
Sbjct: 792 GGSPAVLGGHEGSVEAVAFSPDGLHLV-SAGADGTVRVRDLAHPAEAVVLGRQGSGI-LD 849

Query: 307 ASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            +YSPD   I       G ++   +  +  +    + +    + +   +SP G  +A   
Sbjct: 850 IAYSPDGYSIA----SAGNDRTAEIWNAGHAGVPTVLRGHRVAVWSVAFSPDGRSVAGVA 905

Query: 366 FSGE 369
             G 
Sbjct: 906 VDGT 909



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 87/304 (28%), Gaps = 58/304 (19%)

Query: 184 VVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVA------YATYDDE 234
              GI   +L V   D   G      T         P FS + +++A       + ++ E
Sbjct: 641 GEGGIAGGTLQVRTWDAEHGIGAVTQTLRTASSPTRPVFSADGRRIAALGDEGVSVWEWE 700

Query: 235 DIL-------------------------------------RVYLMDTRIDRAPKRIGNFR 257
            +L                                      V +     D  P  +    
Sbjct: 701 KVLAGQAQPAAMHPVQGLTWRGKVALSSDGQQVAVGGSDGAVRIWKAVGDDQPTVLRGPA 760

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             +L   FS +GK        D  + ++++     +   L        + ++SPD   +V
Sbjct: 761 GWVLGVAFSRDGKWLA-GGGADGTVRLWNL-ADGGSPAVLGGHEGSVEAVAFSPDGLHLV 818

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     + V       +  +   + +   D  +SP G  IA +  +     I    
Sbjct: 819 ---SAGADGTVRVRDLAHPAEAVVLGRQGSGILDIAYSPDGYSIA-SAGNDRTAEIWNAG 874

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             G    L      + +  +SP GRS+        D   K + +D  G    L+    + 
Sbjct: 875 HAGVPTVLRGHRVAVWSVAFSPDGRSVA---GVAVDGTVKTWDVDPVGD---LVALRGHE 928

Query: 438 SDPQ 441
             P 
Sbjct: 929 GRPA 932



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 72/221 (32%), Gaps = 29/221 (13%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVA------------YATYDDEDILRVYLMDTRID 247
           G       P+  +      FSP+ + V               T+D E  +       R  
Sbjct: 612 GGTSVGAHPAESRSFGGAAFSPDGKHVVAGEGGIAGGTLQVRTWDAEHGIGAVTQTLRTA 671

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFIN 304
            +P R          P FS++G+R      +  ++  +   L   A          L   
Sbjct: 672 SSPTR----------PVFSADGRRIAALGDEGVSVWEWEKVLAGQAQPAAMHPVQGLTWR 721

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              + S D  Q+      +G  +++   + G DQ  + +          +S  G  +A  
Sbjct: 722 GKVALSSDGQQVA-VGGSDGAVRIWK--AVGDDQPTVLRGPAGWVLGVAFSRDGKWLA-G 777

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +     +  +   GS   L   + +++A  +SP G  L+
Sbjct: 778 GGADGTVRLWNLADGGSPAVLGGHEGSVEAVAFSPDGLHLV 818



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 74/223 (33%), Gaps = 23/223 (10%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             P  +  +     S + + V            V + D   DRAP  +      ++    S
Sbjct: 941  LPEANSPVAGIAASADGRLVV----SGGQDGTVRVWDVSGDRAPIVLAGNGKPVVHVAVS 996

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIV-FESDRE 323
              G++   +V +D  +DI+       A  RL  T      +   +     ++V F +D  
Sbjct: 997  PRGRQVA-AVDEDGIVDIWKT-ANPAAPTRLRETYPGVPVLEVGFMAHGDRLVGFAAD-- 1052

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKD 379
            G   ++    + S +        ++   P     WSP G  IA          I +   +
Sbjct: 1053 GIPYIWNTPEDSSAEPVPEPFLGSTLVAPPIRTGWSPDGRHIAGVVRG----TILLWDLE 1108

Query: 380  GSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                  L  D   ++   +SP G  L  +     D    +++I
Sbjct: 1109 AGGLTELPGDAGRIRTLAFSPDGAHLAGAAD---DGTIHIWNI 1148



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 54/316 (17%), Positives = 100/316 (31%), Gaps = 38/316 (12%)

Query: 152  RKIAHTISDDIYQSITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            R +AH     +     G +G     I +     S+ S     +  + +   A +  +   
Sbjct: 829  RDLAHPAEAVVL----GRQGSGILDIAYSPDGYSIASAGNDRTAEIWNAGHAGVPTVLRG 884

Query: 210  RDQILFEPRFSPNQQKVAYATYD----DEDILRVYLMDTRIDRAPKRIGNFRSMILAP-- 263
                ++   FSP+ + VA    D      D+  V  +        +           P  
Sbjct: 885  HRVAVWSVAFSPDGRSVAGVAVDGTVKTWDVDPVGDLVALRGHEGRPATAAPGPNELPEA 944

Query: 264  -------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                     S++G R ++S  +D  + ++ V     A   L       +  + SP   Q+
Sbjct: 945  NSPVAGIAASADG-RLVVSGGQDGTVRVWDVSGD-RAPIVLAGNGKPVVHVAVSPRGRQV 1002

Query: 317  VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                D +G   ++   +  +  +           +  +   GD +      G  + I   
Sbjct: 1003 AAV-DEDGIVDIWKTANPAAPTRLRETYPGVPVLEVGFMAHGDRLVGFAADGIPY-IWNT 1060

Query: 377  KKDGSQERL--LVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET- 429
             +D S E +      S L AP     WSP GR +             L+ ++  G  E  
Sbjct: 1061 PEDSSAEPVPEPFLGSTLVAPPIRTGWSPDGRHIAGVV----RGTILLWDLEAGGLTELP 1116

Query: 430  ----LINTPAYASDPQ 441
                 I T A++ D  
Sbjct: 1117 GDAGRIRTLAFSPDGA 1132



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 70/236 (29%), Gaps = 25/236 (10%)

Query: 186  SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G    ++ + +  DG +   +    +  +    FSP+   +  A  D      V + D 
Sbjct: 777  GGGADGTVRLWNLADGGSPA-VLGGHEGSVEAVAFSPDGLHLVSAGADG----TVRVRDL 831

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                    +G   S IL   +S +G     S   D   +I++          L       
Sbjct: 832  AHPAEAVVLGRQGSGILDIAYSPDGYSIA-SAGNDRTAEIWNAGHA-GVPTVLRGHRVAV 889

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNG------SDQKRISQDKEASYFDP------ 352
             S ++SPD   +      +G  + + +   G        + R +         P      
Sbjct: 890  WSVAFSPDGRSVA-GVAVDGTVKTWDVDPVGDLVALRGHEGRPATAAPGPNELPEANSPV 948

Query: 353  ---VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 S  G L+  +        +  +  D +   L      +     SP GR + 
Sbjct: 949  AGIAASADGRLVV-SGGQDGTVRVWDVSGDRAPIVLAGNGKPVVHVAVSPRGRQVA 1003



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/326 (14%), Positives = 98/326 (30%), Gaps = 57/326 (17%)

Query: 113  TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
               +      RL V        R+WDV   +  I       P             +    
Sbjct: 948  VAGIAASADGRLVVSGGQDGTVRVWDVSGDRAPIVLAGNGKP-------------VVHVA 994

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP----RFSPN 222
               +G    ++  V E  +  I K          AN    T  R+     P     F  +
Sbjct: 995  VSPRGR---QVAAVDEDGIVDIWKT---------ANPAAPTRLRETYPGVPVLEVGFMAH 1042

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRALISVQK 278
              ++    +  + I  ++         P       S ++AP     +S +G+     V+ 
Sbjct: 1043 GDRL--VGFAADGIPYIWNTPEDSSAEPVPEPFLGSTLVAPPIRTGWSPDGRHIAGVVRG 1100

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM--QSNGS 336
                 I   DL++     L        + ++SPD + +   +D +G   ++ +   ++ +
Sbjct: 1101 ----TILLWDLEAGGLTELPGDAGRIRTLAFSPDGAHLAGAAD-DGTIHIWNIADPAHRT 1155

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                +    + +     +S     +      G    + V K  G+ E L+       A  
Sbjct: 1156 GPVMLRGRDQGAVRAMTFSQDSRRLITV---GLDATVRVWKTTGTGEPLVFTGFRAAASD 1212

Query: 397  WS--PSGRSLIFSRKKDGDTGSKLYS 420
             +    GR +        D   +++ 
Sbjct: 1213 VTSLADGRYV----TAHDDGVIRIWR 1234



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 58/203 (28%), Gaps = 15/203 (7%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQS--N 292
           +R  L  T +   P    +F        FS +GK  +          + + + D +    
Sbjct: 607 IRTTLGGTSVGAHPAESRSFGGA----AFSPDGKHVVAGEGGIAGGTLQVRTWDAEHGIG 662

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           A  +   T        +S D  +I    D       +     G  Q       +   +  
Sbjct: 663 AVTQTLRTASSPTRPVFSADGRRIAALGDEGVSVWEWEKVLAGQAQPAAMHPVQGLTWRG 722

Query: 353 --VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               S  G  +A    S     I     D     L      +    +S  G+ L      
Sbjct: 723 KVALSSDGQQVA-VGGSDGAVRIWKAVGDDQPTVLRGPAGWVLGVAFSRDGKWLA---GG 778

Query: 411 DGDTGSKLYSIDLNGRNETLINT 433
             D   +L+++  +G +  ++  
Sbjct: 779 GADGTVRLWNL-ADGGSPAVLGG 800


>gi|289664069|ref|ZP_06485650.1| dipeptidyl peptidase IV [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 770

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 54/372 (14%), Positives = 106/372 (28%), Gaps = 98/372 (26%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD----------RDG-ANI 203
           A      +Y     E G     +L   +   + I   +L V D          RDG  N 
Sbjct: 137 ARARCSKLYAKDQPEPG-----VLSPDKRSEAFIRDWNLWVRDLASGQETQLTRDGVENF 191

Query: 204 RYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-------- 252
            Y T +      +     +SP+  K+A    D      +YL+ T++     +        
Sbjct: 192 GYATDNAGWQHTDNAIVAWSPDSSKIATFQQDQRKTGDMYLVSTKLGHPELQSWKYPLAG 251

Query: 253 ------------------------------------IGNFRSMILAPRFSSNGKRALI-- 274
                                               +     +    +++ +        
Sbjct: 252 DKDVTLIERVIIDVPTRSVLRLKTPPDQHRSTLCDDVSCSPGLWDDVKWAPDSNTLAFAS 311

Query: 275 SVQKDEAMDIYSVDLQSNATE------RLTNTLFINISASYS--PDSSQIVFESDREGKE 326
           + +  +   +   D  + A          T      ++A+++  P S++ V+ S+R    
Sbjct: 312 TSRFHKQTWLRIADASTGAVRTAFNETVKTYYESGQVAANWAYLPASNEAVWFSERSDWG 371

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKD 379
           QLY+        KR     E +  + +        A+    G           +  +  D
Sbjct: 372 QLYLYDLATGKPKRAITTGEGNVTELLRVDPATRTAWFVGVGRSAGVDPYYQQLWKVSLD 431

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI--FSRKK-----------DGDTGSKLYSIDLNGR 426
           G +  LL  +    +   SP G   +  +S              DG T S + + D+   
Sbjct: 432 GGEPVLLTPEPANHSIALSPDGARFVDTYSTSVTPPVTLLREAGDGRTVSTIVTADI--- 488

Query: 427 NETLINTPAYAS 438
             T +    +  
Sbjct: 489 --TRLKAAGWVP 498


>gi|282858705|ref|ZP_06267859.1| peptidase, S9A/B/C familie, catalytic domain protein [Prevotella
           bivia JCVIHMP010]
 gi|282588509|gb|EFB93660.1| peptidase, S9A/B/C familie, catalytic domain protein [Prevotella
           bivia JCVIHMP010]
          Length = 721

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/242 (10%), Positives = 73/242 (30%), Gaps = 34/242 (14%)

Query: 220 SPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ + + Y     +  +    +V  +     +  + +         P +  +       
Sbjct: 56  SPDGKNIVYQVGYYSVKENKGHQVLRVMDATGKNDRLLTTSAKSESDPIW-LDNNTIAYL 114

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                   +++++      ++LT++        +SP+  Q+V          +     + 
Sbjct: 115 S----GGQLWTMNANGGNRKQLTHSDLDIEGFKFSPNKKQVVLIKSIPYYGTIAKNPDDL 170

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                +  +                  + + +   F   V     S+   ++E    ++P
Sbjct: 171 DKTTGLLINDMNYRHWDH---------YVQTNTHPFLAEVTAAGVSEGVDIMEGEPFESP 221

Query: 396 T----------WSPSGRSLIFSRKKDGD------TGSKLYSIDLNGRNETLINTPAYASD 439
                      WS   + + ++ +K         T + +Y  D+  +    +  PA   +
Sbjct: 222 VAPFGGIEQIDWSKDSKKIAYTSRKKEGVQYAISTDTDIYLYDIASKTTINLCKPAGYQE 281

Query: 440 PQ 441
           P+
Sbjct: 282 PK 283



 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 51/370 (13%), Positives = 107/370 (28%), Gaps = 106/370 (28%)

Query: 113 TGRVIKEGKDR---LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI--YQSIT 167
              V      +    +V +         Q++                 + D       + 
Sbjct: 50  IASVKPSPDGKNIVYQVGYYSVKENKGHQVL----------------RVMDATGKNDRLL 93

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                  S  +++  + ++ +    L  M+ +G N + LT S   I    +FSPN+++V 
Sbjct: 94  TTSAKSESDPIWLDNNTIAYLSGGQLWTMNANGGNRKQLTHSDLDIEGF-KFSPNKKQVV 152

Query: 228 ------YATYDDEDI---------------LRVYLMDTRIDRAP-----KRIGNFRSMIL 261
                 Y     ++                 R +    + +  P        G    + +
Sbjct: 153 LIKSIPYYGTIAKNPDDLDKTTGLLINDMNYRHWDHYVQTNTHPFLAEVTAAGVSEGVDI 212

Query: 262 ----------AP-------RFSSNGKRALISVQKDEA--------MDIYSVDLQSNATER 296
                     AP        +S + K+   + +K E          DIY  D+ S  T  
Sbjct: 213 MEGEPFESPVAPFGGIEQIDWSKDSKKIAYTSRKKEGVQYAISTDTDIYLYDIASKTTIN 272

Query: 297 L-------------TNTL--------------FINISASYSPDSSQIVFES-----DREG 324
           L             T ++                +++  +SPD   I ++S         
Sbjct: 273 LCKPAGYQEPKIDATKSMRNQEVNHQAGDMQVGYDVNPQFSPDGKYIAWQSMKNNGYESD 332

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + +L VM      +  +++  +++    +W+     + F         I      G   +
Sbjct: 333 RNRLCVMDIATGKKTYVTEKFDSNVDGFIWAANSKDLYFIGCWHACINIYQTNLKG-DIK 391

Query: 385 LLVEDSNLQA 394
            L E  +  A
Sbjct: 392 QLTEGQHDYA 401



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 53/367 (14%), Positives = 99/367 (26%), Gaps = 72/367 (19%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            L+TG    + +D         ++     ++     +  A W      I+          
Sbjct: 12  ALLTGSTAVDAQD--------VNIGKSNIVLSSDVMTPEALW--AMGRIAS------VKP 55

Query: 170 KGDFNSRILFVSE-SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             D  + +  V   SV        L VMD  G N R LT S      +P +  +   +AY
Sbjct: 56  SPDGKNIVYQVGYYSVKENKGHQVLRVMDATGKNDRLLTTSAKS-ESDPIW-LDNNTIAY 113

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS-- 286
            +                    K++ +    I   +FS N K+ ++         I    
Sbjct: 114 LSGGQ------LWTMNANGGNRKQLTHSDLDIEGFKFSPNKKQVVLIKSIPYYGTIAKNP 167

Query: 287 --VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             +D  +       N    +    Y   ++   F ++         +     +       
Sbjct: 168 DDLDKTTGLLINDMNYRHWD---HYVQTNTHP-FLAEVTAAGVSEGVDIMEGEPFESPVA 223

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFA--------IGVMKKDGSQERLLVEDSNLQAP- 395
                    WS     IA+T    E           I +          L + +  Q P 
Sbjct: 224 PFGGIEQIDWSKDSKKIAYTSRKKEGVQYAISTDTDIYLYDIASKTTINLCKPAGYQEPK 283

Query: 396 ---------------------------TWSPSGRSLIFSRKKDGDTGS---KLYSIDLNG 425
                                       +SP G+ + +   K+    S   +L  +D+  
Sbjct: 284 IDATKSMRNQEVNHQAGDMQVGYDVNPQFSPDGKYIAWQSMKNNGYESDRNRLCVMDIAT 343

Query: 426 RNETLIN 432
             +T + 
Sbjct: 344 GKKTYVT 350



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 71/200 (35%), Gaps = 24/200 (12%)

Query: 212 QILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                P+FSP+ + +A+ +  +     D  R+ +MD    +       F S +    +++
Sbjct: 305 GYDVNPQFSPDGKYIAWQSMKNNGYESDRNRLCVMDIATGKKTYVTEKFDSNVDGFIWAA 364

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLT----NTLFINISASYSPDSSQIVFESDRE 323
           N K           ++IY  +L+    ++LT    +   I++  S      Q+V      
Sbjct: 365 NSKDLYFIGCWHACINIYQTNLK-GDIKQLTEGQHDYASIDLLGS---TGKQLVALRHSM 420

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                  + +    +K  +Q + +     ++    D +A    +       V   DG   
Sbjct: 421 SAPNDIFIVTPSKKEKASTQTQISFENKQIF----DQLALANVTDR----WVKTTDGKDM 472

Query: 384 RLLVEDSNLQAPTWSPSGRS 403
           ++ +       P + P+ + 
Sbjct: 473 QVWIITP----PHFDPNKKY 488


>gi|238791745|ref|ZP_04635382.1| Oligogalacturonide lyase [Yersinia intermedia ATCC 29909]
 gi|238728849|gb|EEQ20366.1| Oligogalacturonide lyase [Yersinia intermedia ATCC 29909]
          Length = 395

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/227 (11%), Positives = 69/227 (30%), Gaps = 35/227 (15%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MD 283
           +  +         +           I      +  P +   +        +         
Sbjct: 165 FHEFYFTKPCCRLMRVDLKTGESAVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDAR 224

Query: 284 IYSVDLQSNATERL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQK 339
           ++ ++   +   ++ T+    +     + PD S +V+ S  +G     +Y       + +
Sbjct: 225 MWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPQTLENR 284

Query: 340 RISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMKK-DGSQERL 385
           +++     S+    +   G L+                + I       V    +GSQ R+
Sbjct: 285 QLTSMPACSHLMSNY--DGTLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGSQHRV 342

Query: 386 LVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              D++ Q            P+++P  + ++F+    G     L ++
Sbjct: 343 ARHDTSWQVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 389



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 31/190 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
           +S + F        ++   + +++ DG+N+R + T +  +      + P+   + Y +Y 
Sbjct: 207 DSTVAFC-HEGPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYL 265

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRS-----MILAPRFS-SNGKRALISVQKDEAMDI-- 284
                R            +++ +  +               +G  A + VQ D    I  
Sbjct: 266 KGSPDRFIYSADPQTLENRQLTSMPACSHLMSNYDGTLMVGDGSDAPVDVQDDSGYKIEN 325

Query: 285 ----YSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFESDREGKE 326
               Y  ++++ +  R+      + S               S++PD  QI+F SD  GK 
Sbjct: 326 DPFLYVFNMKNGSQHRVARH---DTSWQVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKP 382

Query: 327 QLYVMQSNGS 336
            LY+     S
Sbjct: 383 ALYLATLPES 392



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 80/240 (33%), Gaps = 25/240 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
               +++    +  +D      +       P  +   R+      F+ +G + L     D
Sbjct: 8   MAKGKQIPLTFHTYQDASTGAQVTRLT---PPDVTCHRNYFYQKCFTRDGSKLLFGGAFD 64

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + Y +DL +    +LT     N    + SP+   + +  D     ++ +     +  
Sbjct: 65  GPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPEDDALFYVKDGRNLMRVCLATLEETVI 124

Query: 339 KRI--SQDKEASYFDPV--------------WSPQGDLIAFTKFSGEKFAIGVMKKD--- 379
            ++        ++                  W P  D   F +F   K    +M+ D   
Sbjct: 125 YQVPEEWVGYGTWVANSDCTKLVGIEIKREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT 184

Query: 380 GSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLINTPAYA 437
           G    +L E+  L  P + P    ++ F  +   D   ++++ I+ +G N   + T A  
Sbjct: 185 GESAVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGSNMRKVKTHAEG 244



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 74/251 (29%), Gaps = 29/251 (11%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F+ +  K+ +     +     YL+D     A +              S     
Sbjct: 43  NYFYQKCFTRDGSKLLFGG-AFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPEDDA 101

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL----------------TNTLFINISAS-YSPDSS 314
                     M +    L+     ++                T  + I I    + P + 
Sbjct: 102 LFYVKDGRNLMRVCLATLEETVIYQVPEEWVGYGTWVANSDCTKLVGIEIKREDWVPLTD 161

Query: 315 QIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF 371
              F      K   +L  +     +   I Q+ +     P++ P     +AF        
Sbjct: 162 WKKFHEFYFTKPCCRLMRVDLKTGESAVILQENQW-LGHPIYRPYDDSTVAFCHEGPHDL 220

Query: 372 ---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               + ++ +DGS  R +    E  +     W P G +L++     G     +YS D   
Sbjct: 221 VDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPQT 280

Query: 426 -RNETLINTPA 435
             N  L + PA
Sbjct: 281 LENRQLTSMPA 291


>gi|22125768|ref|NP_669191.1| oligogalacturonate lyase [Yersinia pestis KIM 10]
 gi|45441550|ref|NP_993089.1| oligogalacturonate lyase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108807803|ref|YP_651719.1| oligogalacturonate lyase [Yersinia pestis Antiqua]
 gi|108812079|ref|YP_647846.1| oligogalacturonate lyase [Yersinia pestis Nepal516]
 gi|145599017|ref|YP_001163093.1| oligogalacturonate lyase [Yersinia pestis Pestoides F]
 gi|149366332|ref|ZP_01888366.1| oligogalacturonate lyase [Yersinia pestis CA88-4125]
 gi|162418416|ref|YP_001607060.1| oligogalacturonate lyase [Yersinia pestis Angola]
 gi|165925435|ref|ZP_02221267.1| oligogalacturonide lyase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165938512|ref|ZP_02227069.1| oligogalacturonide lyase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166008196|ref|ZP_02229094.1| oligogalacturonide lyase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166210748|ref|ZP_02236783.1| oligogalacturonide lyase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401765|ref|ZP_02307256.1| oligogalacturonide lyase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167422641|ref|ZP_02314394.1| oligogalacturonide lyase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167426770|ref|ZP_02318523.1| oligogalacturonide lyase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167467657|ref|ZP_02332361.1| oligogalacturonide lyase [Yersinia pestis FV-1]
 gi|218928841|ref|YP_002346716.1| oligogalacturonate lyase [Yersinia pestis CO92]
 gi|229843828|ref|ZP_04463971.1| oligogalacturonate lyase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229894677|ref|ZP_04509858.1| oligogalacturonate lyase [Yersinia pestis Pestoides A]
 gi|229897087|ref|ZP_04512243.1| oligogalacturonate lyase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229902397|ref|ZP_04517516.1| oligogalacturonate lyase [Yersinia pestis Nepal516]
 gi|270490425|ref|ZP_06207499.1| WD40-like Beta Propeller repeat protein [Yersinia pestis KIM D27]
 gi|294504102|ref|YP_003568164.1| oligogalacturonate lyase [Yersinia pestis Z176003]
 gi|21958692|gb|AAM85442.1|AE013791_1 putative oligogalacturonide lyase [Yersinia pestis KIM 10]
 gi|45436411|gb|AAS61966.1| oligogalacturonate lyase [Yersinia pestis biovar Microtus str.
           91001]
 gi|108775727|gb|ABG18246.1| oligogalacturonate lyase [Yersinia pestis Nepal516]
 gi|108779716|gb|ABG13774.1| oligogalacturonate lyase [Yersinia pestis Antiqua]
 gi|115347452|emb|CAL20356.1| oligogalacturonate lyase [Yersinia pestis CO92]
 gi|145210713|gb|ABP40120.1| oligogalacturonate lyase [Yersinia pestis Pestoides F]
 gi|149290706|gb|EDM40781.1| oligogalacturonate lyase [Yersinia pestis CA88-4125]
 gi|162351231|gb|ABX85179.1| oligogalacturonide lyase [Yersinia pestis Angola]
 gi|165913627|gb|EDR32247.1| oligogalacturonide lyase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165922544|gb|EDR39695.1| oligogalacturonide lyase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165992578|gb|EDR44879.1| oligogalacturonide lyase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166207928|gb|EDR52408.1| oligogalacturonide lyase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166958488|gb|EDR55509.1| oligogalacturonide lyase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048870|gb|EDR60278.1| oligogalacturonide lyase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167054223|gb|EDR64046.1| oligogalacturonide lyase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229680443|gb|EEO76540.1| oligogalacturonate lyase [Yersinia pestis Nepal516]
 gi|229689436|gb|EEO81499.1| oligogalacturonate lyase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229693424|gb|EEO83473.1| oligogalacturonate lyase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229702432|gb|EEO90450.1| oligogalacturonate lyase [Yersinia pestis Pestoides A]
 gi|262361710|gb|ACY58431.1| oligogalacturonate lyase [Yersinia pestis D106004]
 gi|262366151|gb|ACY62708.1| oligogalacturonate lyase [Yersinia pestis D182038]
 gi|270338929|gb|EFA49706.1| WD40-like Beta Propeller repeat protein [Yersinia pestis KIM D27]
 gi|294354561|gb|ADE64902.1| oligogalacturonate lyase [Yersinia pestis Z176003]
 gi|320015120|gb|ADV98691.1| oligogalacturonate lyase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 388

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 31/190 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
           +S + F        ++   + +++ DG+N+R + T +  +      + P+   + Y +Y 
Sbjct: 200 DSTVAFC-HEGPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEVWVPDGSALVYVSYL 258

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRS-----MILAPRFS-SNGKRALISVQKDEAMDI-- 284
                R       +    +++ +  +               +G  A + VQ +    I  
Sbjct: 259 KGSSDRFIYSADPVTLKNRQLTSMPACSHLMSNYDGTLMVGDGSDAPVDVQDNSGYKIEN 318

Query: 285 ----YSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFESDREGKE 326
               Y  ++++    R+      + S               S++PD  Q++F SD  GK 
Sbjct: 319 DPFLYVFNIKNGTQHRIARH---DTSWQVFEGDRQVTHPHPSFTPDDKQVLFTSDVHGKP 375

Query: 327 QLYVMQSNGS 336
            LY++    S
Sbjct: 376 ALYMVTLPES 385



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 82/253 (32%), Gaps = 34/253 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
               +++    +  +D      +       P  +   R+      F+ +G + L     D
Sbjct: 1   MAKGKQIPLTYHTYQDASTGAQVTRLT---PPDVTCHRNYFYQKCFTRDGSKLLFGGAFD 57

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + Y +DL S    +LT     N    + SP+   + +  D      L  +     ++
Sbjct: 58  GPWNYYLLDLNSRVATQLTEGRGDNTFGGFLSPEDDALFYVKD---GRNLMRVDLATLEE 114

Query: 339 KRIS-----QDKEASYFDPV--------------WSPQGDLIAFTKFSGEKFAIGVMKKD 379
             +           ++                  W P  D   F +F   K    +M+ D
Sbjct: 115 NVVYQVPEEWVGYGTWVANSDCTKLVGIEIKREDWQPLTDWKKFHEFYFTKPCCRLMRVD 174

Query: 380 ---GSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLINTP 434
              G    +L E+  L  P + P    ++ F  +   D   ++++ I+ +G N   + T 
Sbjct: 175 LKTGESAVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGSNMRKVKTH 234

Query: 435 AYA---SDPQWVG 444
           A     +   WV 
Sbjct: 235 AEGESCTHEVWVP 247



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/238 (12%), Positives = 72/238 (30%), Gaps = 37/238 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           + P      +  +         +           I      +  P +   +        +
Sbjct: 149 WQPLTDWKKFHEFYFTKPCCRLMRVDLKTGESAVILQENQWLGHPIYRPYDDSTVAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ ++   +   ++ T+    +     + PD S +V+ S  +G     +Y 
Sbjct: 209 GPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEVWVPDGSALVYVSYLKGSSDRFIYS 268

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMK 377
                   ++++     S+    +   G L+                + I       V  
Sbjct: 269 ADPVTLKNRQLTSMPACSHLMSNY--DGTLMVGDGSDAPVDVQDNSGYKIENDPFLYVFN 326

Query: 378 -KDGSQERLLVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            K+G+Q R+   D++ Q            P+++P  + ++F+    G     LY + L
Sbjct: 327 IKNGTQHRIARHDTSWQVFEGDRQVTHPHPSFTPDDKQVLFTSDVHGK--PALYMVTL 382



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 83/255 (32%), Gaps = 37/255 (14%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGK 270
              ++  F+ +  K+ +     +     YL+D    R   ++   R       F S    
Sbjct: 36  NYFYQKCFTRDGSKLLFGG-AFDGPWNYYLLDLN-SRVATQLTEGRGDNTFGGFLSPEDD 93

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL-------------------TNTLFINISAS-YS 310
                  KD   ++  VDL +     +                   T  + I I    + 
Sbjct: 94  ALFYV--KDGR-NLMRVDLATLEENVVYQVPEEWVGYGTWVANSDCTKLVGIEIKREDWQ 150

Query: 311 PDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFS 367
           P +    F      K   +L  +     +   I Q+ +     P++ P     +AF    
Sbjct: 151 PLTDWKKFHEFYFTKPCCRLMRVDLKTGESAVILQENQW-LGHPIYRPYDDSTVAFCHEG 209

Query: 368 GEKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   + ++ +DGS  R +    E  +     W P G +L++     G +   +YS 
Sbjct: 210 PHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEVWVPDGSALVYVSYLKGSSDRFIYSA 269

Query: 422 D-LNGRNETLINTPA 435
           D +  +N  L + PA
Sbjct: 270 DPVTLKNRQLTSMPA 284


>gi|256389966|ref|YP_003111530.1| serine/threonine protein kinase with WD40 repeats [Catenulispora
           acidiphila DSM 44928]
 gi|256356192|gb|ACU69689.1| serine/threonine protein kinase with WD40 repeats [Catenulispora
           acidiphila DSM 44928]
          Length = 757

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 71/197 (36%), Gaps = 12/197 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   VA  TY   D+L + +         + +    ++  +  FS +GK    +  
Sbjct: 555 AFSPDGTLVAVGTYG-GDVLLIDVRQPTGALKQRTLSGHSTLAYSVAFSPDGKTLA-TSS 612

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            D+ + ++ V   S A    T T   +     +Y P    +      + K  L+ + +  
Sbjct: 613 FDKTVKLWDVRTPSAALLLGTATGHTDRVFDIAYHPGGKLLA-TGSGDHKLILFDVSNPA 671

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLV----EDS 390
           +     +  ++       +SP G L+A     G    + +      +  R L     + +
Sbjct: 672 APSVTATVPEDDEATGVAFSPDGRLVA--NGGGASAKVRLYDITAPASPRELAPLSGQTA 729

Query: 391 NLQAPTWSPSGRSLIFS 407
                 +SP G+ L  +
Sbjct: 730 YALGVAFSPDGKLLACA 746



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 14/175 (8%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V    GA  +        + +   FSP+ + +A +++D      V L D R   A   +G
Sbjct: 577 VRQPTGALKQRTLSGHSTLAYSVAFSPDGKTLATSSFDK----TVKLWDVRTPSAALLLG 632

Query: 255 NFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--- 308
                   +    +   GK             +   D+ + A   +T T+  +  A+   
Sbjct: 633 TATGHTDRVFDIAYHPGGKLLA---TGSGDHKLILFDVSNPAAPSVTATVPEDDEATGVA 689

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIA 362
           +SPD   +        K +LY + +  S ++      + +Y     +SP G L+A
Sbjct: 690 FSPDGRLVANGGGASAKVRLYDITAPASPRELAPLSGQTAYALGVAFSPDGKLLA 744



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 64/174 (36%), Gaps = 9/174 (5%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASY 309
           ++ + +S +    FS +  + LI+  +D    +Y V                 +    + 
Sbjct: 454 KLTDQKSAVNHITFSPD-SKILITAAQDNTARLYDVSNPALPKTIGVCAKHTAMVFDVAV 512

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   +   S  +    L+ +    + +               +SP G L+A   + G+
Sbjct: 513 SPDGHTLA-TSSHDKTLGLWDISVPDAPRLLAQLHLGDQLTGVAFSPDGTLVAVGTYGGD 571

Query: 370 KFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              I V +  G+ ++  +    +   +  +SP G++L  S     D   KL+ +
Sbjct: 572 VLLIDVRQPTGALKQRTLSGHSTLAYSVAFSPDGKTLATSS---FDKTVKLWDV 622


>gi|325914544|ref|ZP_08176888.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas vesicatoria ATCC 35937]
 gi|325539314|gb|EGD10966.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas vesicatoria ATCC 35937]
          Length = 263

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 62/170 (36%), Gaps = 24/170 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGS---DQKRISQDKEASYFDP 352
           +T      A+ SPD  +IV+ SDR    G   L+     G    D + +S +       P
Sbjct: 5   STPANEAHATLSPDGQRIVWASDRAGGAGGWDLWQAHLQGGRWQDAQPLSLNTAQDEITP 64

Query: 353 VWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERL-----LVEDSNLQAPTWSPSG 401
           ++S  G  + F           + + + V  + G          +    N +AP+ S  G
Sbjct: 65  LFSADGRWLLFASSRSGGAGGSDLYRVPVDAQGGLGAVQSLGIAINSRGNERAPSLSLDG 124

Query: 402 RSLIFSRK-KDGDTGSKLYSIDLNGR------NETLINTPAYASDPQWVG 444
             L+F+     G  G  ++    +GR          INT     D  W+G
Sbjct: 125 TRLLFASDGHGGAGGLDVFVAHWDGRAFAAPAPLRDINTADDELDAAWLG 174



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 15/121 (12%)

Query: 220 SPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ Q++ +A+         D+ + +L   R   A     N     + P FS++G+  L 
Sbjct: 16  SPDGQRIVWASDRAGGAGGWDLWQAHLQGGRWQDAQPLSLNTAQDEITPLFSADGRWLLF 75

Query: 275 ---SVQKDEAMDIYSVDLQS----NATERL---TNTLFINISASYSPDSSQIVFESDREG 324
                      D+Y V + +     A + L    N+     + S S D ++++F SD  G
Sbjct: 76  ASSRSGGAGGSDLYRVPVDAQGGLGAVQSLGIAINSRGNERAPSLSLDGTRLLFASDGHG 135

Query: 325 K 325
            
Sbjct: 136 G 136



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 25/181 (13%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNA---TERLT-NTLFINI 305
           + +  +       S +G+R + +  +       D++   LQ       + L+ NT    I
Sbjct: 3   VVSTPANEAHATLSPDGQRIVWASDRAGGAGGWDLWQAHLQGGRWQDAQPLSLNTAQDEI 62

Query: 306 SASYSPDSSQIVF---ESDREGKEQLYVMQSNGSD------QKRISQDKEASYFDPVWSP 356
           +  +S D   ++F    S   G   LY +  +            I+ +   +   P  S 
Sbjct: 63  TPLFSADGRWLLFASSRSGGAGGSDLYRVPVDAQGGLGAVQSLGIAINSRGNERAPSLSL 122

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDGSQ------ERLLVEDSNLQAPTWSPSGRSLIFS 407
            G  + F            + V   DG         R +    +     W   GR L+++
Sbjct: 123 DGTRLLFASDGHGGAGGLDVFVAHWDGRAFAAPAPLRDINTADDELDAAWLGDGRGLLWA 182

Query: 408 R 408
           R
Sbjct: 183 R 183



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 64/180 (35%), Gaps = 24/180 (13%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILF 215
           +++ + +++ +      RI++ S+    G     L      G    + + L+ +  Q   
Sbjct: 8   ANEAHATLSPDG----QRIVWASDR-AGGAGGWDLWQAHLQGGRWQDAQPLSLNTAQDEI 62

Query: 216 EPRFSPNQQKVAY-----ATYDDEDILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSS 267
            P FS + + + +           D+ RV +       A + +G   N R    AP  S 
Sbjct: 63  TPLFSADGRWLLFASSRSGGAGGSDLYRVPVDAQGGLGAVQSLGIAINSRGNERAPSLSL 122

Query: 268 NGKRALISVQKDEAM---DIYSVDLQSN-----ATERLTNTLFINISASYSPDSSQIVFE 319
           +G R L +          D++            A  R  NT    + A++  D   +++ 
Sbjct: 123 DGTRLLFASDGHGGAGGLDVFVAHWDGRAFAAPAPLRDINTADDELDAAWLGDGRGLLWA 182


>gi|229148571|ref|ZP_04276825.1| Acylamino-acid-releasing enzyme [Bacillus cereus m1550]
 gi|228634829|gb|EEK91404.1| Acylamino-acid-releasing enzyme [Bacillus cereus m1550]
          Length = 652

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 99/292 (33%), Gaps = 43/292 (14%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++      I +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 30  VAFVKKTADWKDNIYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDARCIAYLSPVGD 88

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQS-- 291
              ++++      R  + I + +  +   ++   GK      Q  E  +I    DL    
Sbjct: 89  GENQIFVKSLDGYRDVQ-ITDEKEGVSTFKWGPTGKGLYYVTQSKECEEIKKRKDLYGDF 147

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  +     +I I           V +SD +  E   V         +++  K+  
Sbjct: 148 QHIGKEHQNNCLYYIEIE---------KVIQSDTDEHENRVVY--------QLTDGKDFH 190

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWSPSG 401
             +   S  G  + F               + ++     + + L V+     +  +SP G
Sbjct: 191 IHEFDISNDGKKVVFMATPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPDG 250

Query: 402 RSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             + ++         R    D+  ++Y I+     + +IN  +     QW  
Sbjct: 251 SKICYTASIREKDYYRNHIQDSTLEIYDINTGEVIQPVINFDSTVMPLQWTA 302


>gi|213962203|ref|ZP_03390467.1| prolyl oligopeptidase family protein [Capnocytophaga sputigena
           Capno]
 gi|213955209|gb|EEB66527.1| prolyl oligopeptidase family protein [Capnocytophaga sputigena
           Capno]
          Length = 634

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 64/175 (36%), Gaps = 20/175 (11%)

Query: 265 FSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQ 315
           +S +GK+ L   +             DIY  DL S  T  LT   +  + +  YS +   
Sbjct: 176 WSLDGKKVLYVTKAKVGTDYVLSTNTDIYEYDLTSKKTTNLTEGMMGYDTNPQYSKEG-V 234

Query: 316 IVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           + + S     +   K  LY++++    +  ++   + + F   WS  G  I     +   
Sbjct: 235 LAWLSMAHNGNESDKNDLYILKN--GKRINLTAQWDNTIFSYRWSNDGKRIYLIAPTQGT 292

Query: 371 FAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             + V+           L +           +G  L+  R  D +  ++LY+I L
Sbjct: 293 EQLFVVDVYSKNTTPIQLTQGVFDVNSIVGQAGDQLVVIRT-DMNHAAELYTISL 346



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 56/161 (34%), Gaps = 14/161 (8%)

Query: 219 FSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +S + +KV Y T       Y       +Y  D    +              P++S  G  
Sbjct: 176 WSLDGKKVLYVTKAKVGTDYVLSTNTDIYEYDLTSKKTTNLTEGMMGYDTNPQYSKEGVL 235

Query: 272 ALISVQKDEA----MDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKE 326
           A +S+  +       D+Y   L++     LT      I S  +S D  +I   +  +G E
Sbjct: 236 AWLSMAHNGNESDKNDLYI--LKNGKRINLTAQWDNTIFSYRWSNDGKRIYLIAPTQGTE 293

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           QL+V+     +   I   +     + +    GD +   +  
Sbjct: 294 QLFVVDVYSKNTTPIQLTQGVFDVNSIVGQAGDQLVVIRTD 334



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/136 (12%), Positives = 43/136 (31%), Gaps = 14/136 (10%)

Query: 309 YSPDSSQIVFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG-- 358
           +S D  ++++ +               +Y           +++       +P +S +G  
Sbjct: 176 WSLDGKKVLYVTKAKVGTDYVLSTNTDIYEYDLTSKKTTNLTEGMMGYDTNPQYSKEGVL 235

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGS 416
             ++      E     +      +   L    +    +  WS  G+ +       G    
Sbjct: 236 AWLSMAHNGNESDKNDLYILKNGKRINLTAQWDNTIFSYRWSNDGKRIYLIAPTQGT--E 293

Query: 417 KLYSIDLNGRNETLIN 432
           +L+ +D+  +N T I 
Sbjct: 294 QLFVVDVYSKNTTPIQ 309



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 75/215 (34%), Gaps = 17/215 (7%)

Query: 176 RILFVSESVVSG----IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           ++L+V+++ V           +   D        LT         P++S     +A+ + 
Sbjct: 182 KVLYVTKAKVGTDYVLSTNTDIYEYDLTSKKTTNLTEGMMGYDTNPQYSKEG-VLAWLSM 240

Query: 232 DDED--ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                   +  L   +  +       + + I + R+S++GKR  +         ++ VD+
Sbjct: 241 AHNGNESDKNDLYILKNGKRINLTAQWDNTIFSYRWSNDGKRIYLIAPTQGTEQLFVVDV 300

Query: 290 QSNATE--RLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGS-----DQKRI 341
            S  T   +LT  +F ++++       Q+V    D     +LY +             ++
Sbjct: 301 YSKNTTPIQLTQGVF-DVNSIVGQAGDQLVVIRTDMNHAAELYTISLKEKKKEYLSLTQL 359

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           S   +  Y      P  + I  T   G+     V+
Sbjct: 360 SHFNDEQYKQIAQCPIKERIIKTT-DGKDMHAWVI 393


>gi|158314582|ref|YP_001507090.1| WD-40 repeat-containing protein [Frankia sp. EAN1pec]
 gi|158109987|gb|ABW12184.1| WD-40 repeat protein [Frankia sp. EAN1pec]
          Length = 1117

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 50/296 (16%), Positives = 100/296 (33%), Gaps = 32/296 (10%)

Query: 161  DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            DI        G   +  + ++   V G I   +  +    +      P RD  ++    S
Sbjct: 771  DILGDHVAVNGAGTTVAVSLAVDGVDGAI--EIWDLRAGSSEPTVTFPGRDATVYSIAIS 828

Query: 221  PNQQKVAYATYDDEDILRVY-----LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P+   +A    D   ++RV+     L           +    +++    F+S+G+    S
Sbjct: 829  PDGALLAAGYDD--GVVRVWDLRAALSTRAAASPVADLAEHGAIVQGLAFTSDGRLLA-S 885

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQ 332
              +D  + ++ +D  ++  +R+      + S    ++S D+  +V   D           
Sbjct: 886  GDQDGTIKLFRLD-GTHPPKRIAEAASTHGSVQGITFSADNGTLVTGGDSGVGVYDVPDV 944

Query: 333  SNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--- 385
            S G     ++   +A+  +       SP G  +A     G    +      G   +    
Sbjct: 945  STGGPLTTVTDISDATTGNLSGGVALSPDGRTLAV----GGHGTVTTWDITGPTPQQQGT 1000

Query: 386  -LVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             L   S   A +   +SP GR L        D    ++     G+ + L N P + 
Sbjct: 1001 SLPVGSKEAAVSTVDFSPDGRLL---TAAGNDGDIAIWDTSRPGQPKPLTNLPGHD 1053



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 38/103 (36%), Gaps = 5/103 (4%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              SP+ + +A   +       +     +       +G+  + +    FS +G R L +  
Sbjct: 969  ALSPDGRTLAVGGHGTVTTWDITGPTPQQQGTSLPVGSKEAAVSTVDFSPDG-RLLTAAG 1027

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIV 317
             D  + I+         + LTN    +     A+++ DS  +V
Sbjct: 1028 NDGDIAIWDTSRP-GQPKPLTNLPGHDNGTRLAAFTDDSRTLV 1069



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 79/220 (35%), Gaps = 20/220 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALI 274
            +S +   +A           V + D   + +P +      +  +P    F   G+   +
Sbjct: 688 AYSADGLHLAVGFGASGGT--VNVWDVTDESSPAQGAPIERLNDSPTSLTFDRAGQTLAV 745

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE---QLYVM 331
              KD A+ + +V        RLT    +    + +   + +      +G +   +++ +
Sbjct: 746 -GTKDGAVRLSTVASPGMPQPRLTVPDILGDHVAVNGAGTTVAVSLAVDGVDGAIEIWDL 804

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER------- 384
           ++  S+       ++A+ +    SP G L+A   +      +  ++   S          
Sbjct: 805 RAGSSEPTVTFPGRDATVYSIAISPDGALLA-AGYDDGVVRVWDLRAALSTRAAASPVAD 863

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           L    + +Q   ++  GR L  S  +DG    KL+ +D  
Sbjct: 864 LAEHGAIVQGLAFTSDGRLLA-SGDQDGT--IKLFRLDGT 900


>gi|315296930|gb|EFU56217.1| conserved hypothetical protein [Escherichia coli MS 16-3]
          Length = 416

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +          +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWMED------GQLWITETD 415



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 415



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 5/104 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            ++   +   N  S   A  FS +G+       +D  + I   D
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW--MEDGQLWITETD 415


>gi|288924837|ref|ZP_06418774.1| dipeptidyl peptidase IV [Prevotella buccae D17]
 gi|288338624|gb|EFC76973.1| dipeptidyl peptidase IV [Prevotella buccae D17]
          Length = 735

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 102/294 (34%), Gaps = 24/294 (8%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN----IRYLTPSRDQILFE 216
           DI  ++  E    +    +V ++ +       +  +  DG++     + +      I   
Sbjct: 139 DIGTNMVAEWNPASQTTAYVKDNQLYVKDGKEVVQLTTDGSSDIVYGQSVHRDEFGINGG 198

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ QK+A+   D   +    L+    +      G  R     P          ++ 
Sbjct: 199 LFWSPDGQKLAFYRMDQSMVSTFPLVTMPENDWVPAEGQSRIATPEPIRYP------MAG 252

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIV-FESDREGKE-QLYVM 331
           +    + +   DL++  T  L      +    + S++PDS  I  FE +R+  + +L   
Sbjct: 253 ETSHKVTVGVYDLKNKKTVYLKAGDPTDRYFTNISWNPDSKTIYMFELNRDQNDCRLVSY 312

Query: 332 QSNGSDQ-KRISQDKEASYFDP----VWSP-QGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            +   D+   I ++ +A Y +P    V+ P                 + +    G + R 
Sbjct: 313 NAETGDKITEIYRETDAKYVEPLHPIVFLPWDKSRFVMQSQRDGYNHLYLYNIKGEKIRQ 372

Query: 386 LVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAY 436
           L     +      +    +++I+   +        + +D+  G+   L N   +
Sbjct: 373 LTSGKWVVLDLVGFDAKRKAVIYQSNECSPIQKNTWRVDVQTGKRALLDNGKGW 426



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 56/180 (31%), Gaps = 27/180 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +GK  ++ +  D + DI    +   +  R  +   IN    +SPD  ++ F         
Sbjct: 167 DGKE-VVQLTTDGSSDI----VYGQSVHR--DEFGINGGLFWSPDGQKLAF--------- 210

Query: 328 LYVMQSNGSDQKRISQDKEASYF-----DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            Y M  +      +    E  +        + +P+         +  K  +GV      +
Sbjct: 211 -YRMDQSMVSTFPLVTMPENDWVPAEGQSRIATPEPIRYPMAGETSHKVTVGVYDLKNKK 269

Query: 383 ERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYA 437
              L      D      +W+P  +++            +L S +   G   T I     A
Sbjct: 270 TVYLKAGDPTDRYFTNISWNPDSKTIYMFELNRDQNDCRLVSYNAETGDKITEIYRETDA 329


>gi|296121252|ref|YP_003629030.1| serine/threonine protein kinase-related protein [Planctomyces
           limnophilus DSM 3776]
 gi|296013592|gb|ADG66831.1| Serine/threonine protein kinase-related protein [Planctomyces
           limnophilus DSM 3776]
          Length = 842

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 102/287 (35%), Gaps = 29/287 (10%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-----VSG 187
             D KQ+       +   W +  H I+  +          F  ++  VS S        G
Sbjct: 566 TSDNKQLFTAIDDGTIRVWNRDQHRIAGTVQ--------AFAGQVWDVSASEDRKFFAGG 617

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               S+ V D     +     +   +    +F+P   ++A  T       +V + D    
Sbjct: 618 GDDGSVKVFDLSTRQLHETLKAGGPVRTL-QFAPKGHRLAVGT----RTGQVEIWDVDTK 672

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                     S +++  +S++G+    +   D+ ++++      +    +T       S 
Sbjct: 673 ERLLMNPGHTSGVVSVAWSNDGQFLA-TGGGDKTVNLWDA-ADGSLLLEMTGHTGGVYSV 730

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +++ D  +IV        ++L+V  +             A  +    SP G L+A    +
Sbjct: 731 AFTADDQKIV---TGGWDKKLHVWDAATGSSLGELDGHTADIWSVACSPAGALVA---SA 784

Query: 368 GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDG 412
           GE   + +   D  +   ++ D    + +  +S  G+S++ +  +DG
Sbjct: 785 GEDRMLRLWDLDTMKPVAVLNDQSGTIYSVCFSADGKSVL-TTGRDG 830



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/242 (11%), Positives = 69/242 (28%), Gaps = 14/242 (5%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISD-DIYQSITGEKGDFNSRILFVSESVVSG 187
           ++WDV   +    K F             +S   +++++         +       +  G
Sbjct: 601 QVWDVSASED--RKFFAGGGDDGSVKVFDLSTRQLHETLKAGGPVRTLQFAPKGHRLAVG 658

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + + D D      + P     +    +S + Q +A           V L D    
Sbjct: 659 TRTGQVEIWDVDTKERLLMNPGHTSGVVSVAWSNDGQFLA----TGGGDKTVNLWDAADG 714

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINIS 306
                +      + +  F+++ ++ +          ++  D  +  +   L        S
Sbjct: 715 SLLLEMTGHTGGVYSVAFTADDQKIV---TGGWDKKLHVWDAATGSSLGELDGHTADIWS 771

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + SP        +       L +   +      +  D+  + +   +S  G  +  T  
Sbjct: 772 VACSPAG---ALVASAGEDRMLRLWDLDTMKPVAVLNDQSGTIYSVCFSADGKSVLTTGR 828

Query: 367 SG 368
            G
Sbjct: 829 DG 830



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 64/180 (35%), Gaps = 28/180 (15%)

Query: 252 RIGNFRSMILAPRF----SSNGKRALISVQKDEAMDIYSVD---LQSNATERLTNTLFIN 304
           + G   +    P +    +S+ K+   +   D  + +++ D   +    T +       +
Sbjct: 548 KPGRVYTNNAGPVWGMEITSDNKQL-FTAIDDGTIRVWNRDQHRIAG--TVQAFAGQVWD 604

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAF 363
           +SA  S D           G +   V   + S ++   +           ++P+G  +A 
Sbjct: 605 VSA--SEDRKFFA-----GGGDDGSVKVFDLSTRQLHETLKAGGPVRTLQFAPKGHRLAV 657

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYS 420
              +G +  I  +    ++ERLL+   +     +  WS  G+ L       GD    L+ 
Sbjct: 658 GTRTG-QVEIWDVD---TKERLLMNPGHTSGVVSVAWSNDGQFLA---TGGGDKTVNLWD 710


>gi|255553329|ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communis]
 gi|223543104|gb|EEF44638.1| WD-repeat protein, putative [Ricinus communis]
          Length = 775

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 76/230 (33%), Gaps = 26/230 (11%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R L   RD +      SPN   +A  + D      V L           I  F   I  
Sbjct: 56  PRILRHHRDGVTAL-SLSPNSTCLASGSIDH----SVKLYKFPGGEFESNITRFTLPIRV 110

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             F+ +G     +   +    I ++D   +    L          ++ P+   +    D 
Sbjct: 111 LAFNKSGSMLAAAGDDEGIKLINTID--GSIARVLKGHKEPVTGLAFDPNGEYLA-SVDS 167

Query: 323 EGKEQLYVMQSNGSDQKRI------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            G    + +  +G+    +      +    +      WSP G+ +A     G +  + + 
Sbjct: 168 TGTVIFWEL-QSGTVLHTLKAVAPHTGSDTSVMNVVSWSPDGETLAV---PGLRNDVVMY 223

Query: 377 KKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +D + E+L     +   P    +WSP+GR   +      D    ++ +D
Sbjct: 224 DRDTA-EKLFSLRGDHVQPICFLSWSPNGR---YMATSGLDKQILIWDVD 269



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 74/239 (30%), Gaps = 29/239 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +    + +  A+    D          +   P+ + + R  + A   S N    L S   
Sbjct: 27  WDHQTRHLVTAS--SSDPTICIHDPLLLSNGPRILRHHRDGVTALSLSPN-STCLASGSI 83

Query: 279 DEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D ++ +Y            +T         +++   S +    D EG   + ++ +    
Sbjct: 84  DHSVKLYKFP--GGEFESNITRFTLPIRVLAFNKSGSMLAAAGDDEG---IKLINTIDGS 138

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--------VED 389
             R+ +  +       + P G+ +A    +G    I    + G+    L         + 
Sbjct: 139 IARVLKGHKEPVTGLAFDPNGEYLASVDSTGT--VIFWELQSGTVLHTLKAVAPHTGSDT 196

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP----QWVG 444
           S +   +WSP G +L     ++      +   D +   E L +       P     W  
Sbjct: 197 SVMNVVSWSPDGETLAVPGLRN-----DVVMYDRDTA-EKLFSLRGDHVQPICFLSWSP 249


>gi|153871139|ref|ZP_02000385.1| G-protein beta WD-40 repeat [Beggiatoa sp. PS]
 gi|152072397|gb|EDN69617.1| G-protein beta WD-40 repeat [Beggiatoa sp. PS]
          Length = 179

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 67/164 (40%), Gaps = 15/164 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQ 277
           FSP+ +K+A  ++++     + + +T   +  + + GN    + A  FS +GK+ +    
Sbjct: 26  FSPDGKKIAAGSFNE----TITIWETDTGQLLRTLQGNGMRTVYAVAFSPDGKKII---S 78

Query: 278 KDEAMDIYSVDLQSNATERLTNTL----FINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            D + ++   D  +  +  +            S ++SP+   +V  +   G E +    +
Sbjct: 79  GDLSNNVRVWDTSTGNSLFILKGFEGVFGSIFSVAFSPNGGVMV--ASGSGDETIKWWNA 136

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +   +    Q+  +      +SP G ++A +        + +M 
Sbjct: 137 SSGKELHTHQNDGSDVRAITFSPDGRMLA-SGHDDNTIKLWIMP 179



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 32/184 (17%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
           R+      + +  FS +GK+   +   +E + I+  D  +    R      +    + ++
Sbjct: 13  RLIKGPDSLYSVVFSPDGKKIA-AGSFNETITIWETD--TGQLLRTLQGNGMRTVYAVAF 69

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE---ASYFDPVWSPQGDLIAFTKF 366
           SPD  +I+     +    + V  ++  +   I +  E    S F   +SP G ++  +  
Sbjct: 70  SPDGKKII---SGDLSNNVRVWDTSTGNSLFILKGFEGVFGSIFSVAFSPNGGVMVASGS 126

Query: 367 SGEKF---------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             E            +   + DGS  R +          +SP GR L        D   K
Sbjct: 127 GDETIKWWNASSGKELHTHQNDGSDVRAIT---------FSPDGRMLA---SGHDDNTIK 174

Query: 418 LYSI 421
           L+ +
Sbjct: 175 LWIM 178



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 67/176 (38%), Gaps = 18/176 (10%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPR 218
           D +Y  +    G          + + +G    ++ + + D G  +R L  +  + ++   
Sbjct: 19  DSLYSVVFSPDG----------KKIAAGSFNETITIWETDTGQLLRTLQGNGMRTVYAVA 68

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQ 277
           FSP+ +K+   + D  + +RV+   T       K        I +  FS NG   + S  
Sbjct: 69  FSPDGKKII--SGDLSNNVRVWDTSTGNSLFILKGFEGVFGSIFSVAFSPNGGVMVASGS 126

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQ 332
            DE +  +  +  S            ++ A ++SPD   +      +   +L++M 
Sbjct: 127 GDETIKWW--NASSGKELHTHQNDGSDVRAITFSPDGRMLA-SGHDDNTIKLWIMP 179



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 53/162 (32%), Gaps = 14/162 (8%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEA 347
           + +    RL        S  +SPD  +I   S     E + + +++     R +  +   
Sbjct: 6   INTATELRLIKGPDSLYSVVFSPDGKKIAAGSF---NETITIWETDTGQLLRTLQGNGMR 62

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-----SNLQAPTWSPSGR 402
           + +   +SP G  I     S     + V          +++       ++ +  +SP+G 
Sbjct: 63  TVYAVAFSPDGKKIISGDLSN---NVRVWDTSTGNSLFILKGFEGVFGSIFSVAFSPNGG 119

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            ++      GD   K ++        T  N  +      +  
Sbjct: 120 VMV--ASGSGDETIKWWNASSGKELHTHQNDGSDVRAITFSP 159


>gi|107025638|ref|YP_623149.1| coagulation factor 5/8 type-like [Burkholderia cenocepacia AU 1054]
 gi|116693180|ref|YP_838713.1| coagulation factor 5/8 type domain-containing protein [Burkholderia
           cenocepacia HI2424]
 gi|105895012|gb|ABF78176.1| coagulation factor 5/8 type-like protein [Burkholderia cenocepacia
           AU 1054]
 gi|116651180|gb|ABK11820.1| coagulation factor 5/8 type domain protein [Burkholderia
           cenocepacia HI2424]
          Length = 487

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 86/267 (32%), Gaps = 23/267 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYD 232
           +  L     V  G   + L + D     +  L+ S   I       FSP+ + +A+    
Sbjct: 62  TGKLVYHSYVKYGDGTSQLFLYDFSAHTLTQLSKSAWGITDPMNGVFSPDGKWLAFMGIS 121

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +     V+++       P  + N         P+FS++GK  +     D      S    
Sbjct: 122 NG-AWNVFMLQLGAGTPPVNMTNSTGATRNEDPKFSTDGKTLVFKQNGDVKQATLSYTSA 180

Query: 291 S---NATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                +   LTN            +PD+S + + +       L              +  
Sbjct: 181 GPVFTSVVSLTNAPAGAEYSMPFLAPDASAVYYATGTGSNMGLMKRTIATGATAVFDRPA 240

Query: 346 EASYFDPVWSPQGDLIAFTKF--SGEKFAIG--VMKKDGSQERLLVED--SNLQAPTWSP 399
               + P     G ++ + ++  SG    I         +   L + D  SN   P  +P
Sbjct: 241 GLQTYYPTVRADG-MVYYARWKDSGGADQIYAKTADPASTPSALALNDCMSNNSDP--AP 297

Query: 400 -SGR-SLIFSRKKDGDTGSKLYSIDLN 424
            SG   L FS    G  G +LY  D+ 
Sbjct: 298 VSGTNYLFFSSTTAG--GYQLYVGDVT 322



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 56/137 (40%), Gaps = 11/137 (8%)

Query: 314 SQIVFESDR---EGKEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLIAFTKFSG 368
            ++V+ S     +G  QL++   +     ++S+         + V+SP G  +AF   S 
Sbjct: 63  GKLVYHSYVKYGDGTSQLFLYDFSAHTLTQLSKSAWGITDPMNGVFSPDGKWLAFMGISN 122

Query: 369 EKFAIGVMKKD-GSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             + + +++   G+    +      +  + P +S  G++L+F  K++GD      S    
Sbjct: 123 GAWNVFMLQLGAGTPPVNMTNSTGATRNEDPKFSTDGKTLVF--KQNGDVKQATLSYTSA 180

Query: 425 GRNETLINTPAYASDPQ 441
           G   T + +   A    
Sbjct: 181 GPVFTSVVSLTNAPAGA 197


>gi|313675841|ref|YP_004053837.1| hypothetical protein [Marivirga tractuosa DSM 4126]
 gi|312942539|gb|ADR21729.1| WD40-like beta Propeller containing protein [Marivirga tractuosa
           DSM 4126]
          Length = 1082

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 100/305 (32%), Gaps = 40/305 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR------DQI 213
           D +Y+S     G+F +          +   K  + + D +  + + +          +  
Sbjct: 298 DLVYKSKLSPNGEFLAY-------STNNKGKYKVKIRDIESGSEKTVLRGGQKKLKDNFY 350

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  P F             +  I  +YL D   ++  KR       +       NGK A+
Sbjct: 351 VDAPVFDWGDSTTLGIVNYERGINILYLYDPYTNKFQKRDLRRFDQVNHMDIYPNGKTAV 410

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--------- 324
           +S   +   D+Y +        RLTN +F N+  S+ P + +IVF S+R+          
Sbjct: 411 LSANVNAQSDLYLISTGRPNIRRLTNDVFDNLYPSFIPSTKRIVFASNRKSDSLSTEFKY 470

Query: 325 ---KEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDG 380
               +   + + +     ++ Q           + P      +       F +  +  + 
Sbjct: 471 EDVTDNYNLFELDIDQPSQLKQLTNYFGQITHITIPDSSTAFYLSDKSGIFNLYRLDLNK 530

Query: 381 SQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +  + +    S ++     P             +     Y +D NG  +  +     +++
Sbjct: 531 NTSKQITAFGSGIKQYDILP-------------EFNYFTYVMDFNGEEKFYLEKNFNSNE 577

Query: 440 PQWVG 444
            +++ 
Sbjct: 578 GKFLP 582


>gi|163748583|ref|ZP_02155836.1| Acylamino-acid-releasing enzyme [Shewanella benthica KT99]
 gi|161331693|gb|EDQ02497.1| Acylamino-acid-releasing enzyme [Shewanella benthica KT99]
          Length = 666

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 92/252 (36%), Gaps = 33/252 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R S ++ + A+       + ++ L   +     + + +   ++     +++G +      
Sbjct: 177 RASHDKPEYAHGERKTNPLYKLDLQHFKQ----QLVLDDDKVVWQFSVNNDGSKIARITT 232

Query: 278 KD-------EAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQIVFESD 321
            D          DI   D ++  ++ L +T +   + S         +  D+ Q+ F  D
Sbjct: 233 ADNELVNLEGWSDIEIYDTKTKTSKVLADTAWREQAPSPYGWLLGLDWHSDNQQLAFRID 292

Query: 322 REGKE-QLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +G   +L+V  +       I++  +   S  +  W P  D I +      +  +   + 
Sbjct: 293 FDGHPGKLFVSNTTKGSLLEITRPDDVTLSAANIHWRPNSDEICYLGADHARVKLFCTQV 352

Query: 379 D----GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN---ETLI 431
           D    G    ++  D  + + ++S +G+ L+FS     D    L+  D N R    + + 
Sbjct: 353 DDDEQGDTRTVIKGDLVIGSYSFSHNGKKLVFSHN-GLDHFYDLFLADANSRRAKYKRIT 411

Query: 432 NTPAYASDPQWV 443
           N         W+
Sbjct: 412 NINPQVD--SWI 421



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/272 (12%), Positives = 76/272 (27%), Gaps = 54/272 (19%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI----LAPRFSSNGKRALI- 274
           SP+ ++  +     +  L     D        R     +       +P++S +G      
Sbjct: 50  SPDGKRALWLESRWDKELDKSQQDLWTVTTKTRQTTRLTFTNESESSPQWSPDGTYIYYL 109

Query: 275 --------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGK 325
                       +    ++ +         +T  +    + S S D + + F  S     
Sbjct: 110 SKITHEDKQAPFNGKKQVFRISHNGGEAVPMTKEVEGVSAFSVSSDGNSLYFLTSKTVKD 169

Query: 326 EQLYVMQSNGSD----------------------QKRISQDKEASYFDPVWSPQGDLIAF 363
           E L+       D                      ++++  D +   +    +  G  IA 
Sbjct: 170 EDLWAGMRASHDKPEYAHGERKTNPLYKLDLQHFKQQLVLDDDKVVWQFSVNNDGSKIAR 229

Query: 364 TKFSGEKF-------AIGVMKKDGSQERLLVEDSNLQ-APT---------WSPSGRSLIF 406
              +  +         I +        ++L + +  + AP+         W    + L F
Sbjct: 230 ITTADNELVNLEGWSDIEIYDTKTKTSKVLADTAWREQAPSPYGWLLGLDWHSDNQQLAF 289

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
               DG  G KL+  +    +   I  P   +
Sbjct: 290 RIDFDGHPG-KLFVSNTTKGSLLEITRPDDVT 320



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 16/121 (13%)

Query: 258 SMILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSP 311
             + + + S +GKRAL    + +        D+++V  ++  T RLT T     S  +SP
Sbjct: 42  GGMSSVQLSPDGKRALWLESRWDKELDKSQQDLWTVTTKTRQTTRLTFTNESESSPQWSP 101

Query: 312 DSSQIVFESDRE---------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           D + I + S            GK+Q++ +  NG +   ++++ E        S  G+ + 
Sbjct: 102 DGTYIYYLSKITHEDKQAPFNGKKQVFRISHNGGEAVPMTKEVEG-VSAFSVSSDGNSLY 160

Query: 363 F 363
           F
Sbjct: 161 F 161


>gi|331685413|ref|ZP_08385999.1| conserved hypothetical protein [Escherichia coli H299]
 gi|331077784|gb|EGI48996.1| conserved hypothetical protein [Escherichia coli H299]
          Length = 415

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 265 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 324

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 325 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 380

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +          +L+  + +
Sbjct: 381 NHANPPSADAVVFSPDGQWLAWMED------GQLWITETD 414



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 303 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 362

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 363 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 414



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 5/104 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 316 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 373

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            ++   +   N  S   A  FS +G+       +D  + I   D
Sbjct: 374 EVEYLTENHANPPSAD-AVVFSPDGQWLAW--MEDGQLWITETD 414


>gi|313205901|ref|YP_004045078.1| prolyl oligopeptidase family protein [Riemerella anatipestifer DSM
           15868]
 gi|312445217|gb|ADQ81572.1| prolyl oligopeptidase family protein [Riemerella anatipestifer DSM
           15868]
          Length = 661

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 87/245 (35%), Gaps = 41/245 (16%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN +K+AY+    E ++   L   + +  P           A  +S    R      + 
Sbjct: 121 SPNGKKIAYS---KEVLVEKVLGKEKYNDVP--------NTTAHVYSDLNHRHWDYFNQG 169

Query: 280 EAMDIYSVDLQ-SNATERLTNTLFINISA----------SYSPDSSQIVFE--------S 320
               I+ +DL  +++ + L      + S            +SPDSSQ++F          
Sbjct: 170 RYNHIFVIDLDKNSSPKDLLEGKKWD-SPQRPFGGAEDFVFSPDSSQLLFVMKPLEGAEY 228

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGV 375
            +     ++    +    K +++  +     P +SP G+ + +   + + +      + +
Sbjct: 229 AKSTNTDIFSYHFDSETIKNLTEANKGYDVSPKFSPDGNYLTWLSMARDGYEADKNDLKI 288

Query: 376 MKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           M         L +D +        WS + + L F+    G    +L+SI    +  T I 
Sbjct: 289 MDWKTGVITNLTKDWDESVTGDFFWSQNNQLLYFTAAYRGTK--QLFSISPKSKKVTKIT 346

Query: 433 TPAYA 437
              + 
Sbjct: 347 EGTFD 351



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 59/174 (33%), Gaps = 7/174 (4%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD------EDILRVYL 241
                +     D   I+ LT +       P+FSP+   + + +         ++ L++  
Sbjct: 231 STNTDIFSYHFDSETIKNLTEANKGYDVSPKFSPDGNYLTWLSMARDGYEADKNDLKIMD 290

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             T +     +     S+     +S N +    +        ++S+  +S    ++T   
Sbjct: 291 WKTGVITNLTK-DWDESVTGDFFWSQNNQLLYFTAAYRGTKQLFSISPKSKKVTKITEGT 349

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           F          +  +V  +D      L+ + +     K++++  +  Y +   S
Sbjct: 350 FDVNDIITETKNQLLVTRTDINHNADLFSVNTKSGAMKQVTEVNKEMYQNIATS 403


>gi|158333253|ref|YP_001514425.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158303494|gb|ABW25111.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1044

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/239 (12%), Positives = 81/239 (33%), Gaps = 17/239 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ + D     +     +    ++    SP+   +   + D      + + + +
Sbjct: 821  SASGDCTIKLWDVPTGKLLRTFAAHPMTVWSVAISPDGTLLVSGSEDR----TLKVWNIK 876

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +  + +      + +   SSNG+    S   D+ + ++ +                 I
Sbjct: 877  TGKLVRTLKGHSGQVRSVAISSNGQMIA-SASSDKTVKLWEL-KTGKLLRTFKGHTGRVI 934

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S ++ P S ++   S     + + +         R  Q+         +SP G+ +A   
Sbjct: 935  SIAFGPSSQRLASASQ---DKTVKLWDLKSGKLNRTIQEHTKPVTAVTFSPDGNTLATGS 991

Query: 366  FSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                   + +        R  +     ++ +  ++  G+SL+ S K   ++  K++S D
Sbjct: 992  LDRT---VKLWNLSTGALRHTLTGYQGDIYSLAFAADGQSLVSSSK---NSAIKVWSRD 1044



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 70/227 (30%), Gaps = 40/227 (17%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V       L V        ++W++K  K +  +         R +A             
Sbjct: 851  SVAISPDGTLLVSGSEDRTLKVWNIKTGKLV--RTLKGHSGQVRSVA------------- 895

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                    I    + + S     ++ + +     +          +    F P+ Q++A 
Sbjct: 896  --------ISSNGQMIASASSDKTVKLWELKTGKLLRTFKGHTGRVISIAFGPSSQRLAS 947

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            A+ D      V L D +  +  + I      + A  FS +G     +   D  + ++  +
Sbjct: 948  ASQDK----TVKLWDLKSGKLNRTIQEHTKPVTAVTFSPDGNTLA-TGSLDRTVKLW--N 1000

Query: 289  LQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            L + A    LT       S +++ D   +V  S       + V   +
Sbjct: 1001 LSTGALRHTLTGYQGDIYSLAFAADGQSLVSSSK---NSAIKVWSRD 1044



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 54/165 (32%), Gaps = 13/165 (7%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQ 315
           +  I +   S +GK  +     D+  DI   +L      R L++      + +  P    
Sbjct: 762 KQAIWSVALSPDGKTLI--GSGDQN-DIKLWNLGKGQLIRTLSDHKDQVWTIALGPKGKI 818

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +   S   G   + +         R       + +    SP G L+  +        +  
Sbjct: 819 LASAS---GDCTIKLWDVPTGKLLRTFAAHPMTVWSVAISPDGTLLV-SGSEDRTLKVWN 874

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +K  G   R L      +++   S +G+ +  +     D   KL+
Sbjct: 875 IKT-GKLVRTLKGHSGQVRSVAISSNGQMIASASS---DKTVKLW 915


>gi|111018339|ref|YP_701311.1| dipeptidyl aminopeptidase [Rhodococcus jostii RHA1]
 gi|110817869|gb|ABG93153.1| probable dipeptidyl aminopeptidase [Rhodococcus jostii RHA1]
          Length = 682

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 59/188 (31%), Gaps = 13/188 (6%)

Query: 264 RFSSNGKRALISVQKDE-----AMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIV 317
             S +G   + S             +  VD ++ A   L +    ++S    SPD   +V
Sbjct: 223 ALSDDGAFVVSSWTVPGPLASIRSILVRVDTETGARTVLVDDADADLSDPVISPDGRHVV 282

Query: 318 FESDREGKEQ------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           F  +            L+    +      ++   +       W   G  +  T     + 
Sbjct: 283 FTRESHATPDAAPRFTLHRYSFDTGTVSEVAPGWDRWATSVAWLSDGSGLLVTADDRGRA 342

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            I +++      R+  +D        +P G ++ F+ +           ID+     +L+
Sbjct: 343 PIFLLRDGADPTRVTTDDCAYTDLQVAPDGSTV-FALRASYAAPPHPVRIDITTGAVSLL 401

Query: 432 NTPAYASD 439
             PA   +
Sbjct: 402 KAPADLPE 409



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 59/157 (37%), Gaps = 17/157 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRV----YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             S +   V  +      +  +      +DT        + +  + +  P  S +G+  +
Sbjct: 223 ALSDDGAFVVSSWTVPGPLASIRSILVRVDTETGARTVLVDDADADLSDPVISPDGRHVV 282

Query: 274 ISVQKDEAMD------IYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREG 324
            + +     D      ++     +     +      +    S ++  D S ++  +D  G
Sbjct: 283 FTRESHATPDAAPRFTLHRYSFDTGTVSEV--APGWDRWATSVAWLSDGSGLLVTADDRG 340

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +  +++++ +G+D  R++ D + +Y D   +P G  +
Sbjct: 341 RAPIFLLR-DGADPTRVTTD-DCAYTDLQVAPDGSTV 375



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/167 (11%), Positives = 45/167 (26%), Gaps = 7/167 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-----DDED 235
           +       I++ L  +D +      L    D  L +P  SP+ + V +        D   
Sbjct: 236 TVPGPLASIRSILVRVDTETGARTVLVDDADADLSDPVISPDGRHVVFTRESHATPDAAP 295

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              ++          +    +     +  + S+G   L++        I+ +        
Sbjct: 296 RFTLHRYSFDTGTVSEVAPGWDRWATSVAWLSDGSGLLVTADDRGRAPIFLL-RDGADPT 354

Query: 296 RLTNTLFINISASYSPDSSQ-IVFESDREGKEQLYVMQSNGSDQKRI 341
           R+T           +PD S      +          +         +
Sbjct: 355 RVTTDDCAYTDLQVAPDGSTVFALRASYAAPPHPVRIDITTGAVSLL 401



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 41/103 (39%), Gaps = 14/103 (13%)

Query: 258 SMILAPRFSSNGKRALISVQKDEA------MDIYSVDLQSN-ATERLTNTLFINISASYS 310
             +     S++G+R +++    +         ++ +D     A  RLT       + +++
Sbjct: 23  GRVGGLALSADGRRLVVAQSTLDEKATKYVTALWEIDPTGEFAARRLTRGRSGESNPTFT 82

Query: 311 PDSSQIVFESDREGKEQ------LYVMQSNGSDQKRISQDKEA 347
            D   ++F S R  +++      L+ + + G +   +++    
Sbjct: 83  SDGD-LLFTSSRPTQDEDDLPDDLWRLPARGGEAVVVARRGGG 124


>gi|238787055|ref|ZP_04630855.1| Oligogalacturonide lyase [Yersinia frederiksenii ATCC 33641]
 gi|238724843|gb|EEQ16483.1| Oligogalacturonide lyase [Yersinia frederiksenii ATCC 33641]
          Length = 388

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/236 (10%), Positives = 71/236 (30%), Gaps = 35/236 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           + P      +  +         +           I      +  P +   +        +
Sbjct: 149 WQPLTDWKKFHEFYFTKPCCRLMRVDLKTGESAVILQENQWLGHPIYRPYDDNTVAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ ++   +   ++ T+    +     + PD S +V+ S  +G     +Y 
Sbjct: 209 GPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYMKGSPDRFIYS 268

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMK 377
                 + ++++     S+    +   G L+                + I       V  
Sbjct: 269 ADPETLENRQLTSMPACSHLMSNY--DGTLMVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326

Query: 378 K-DGSQERLLVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +G+Q R+   D++ +            P+++P  + ++F+    G     L ++
Sbjct: 327 MKNGTQHRIARHDTSWKVFEGDRQVTHPHPSFTPDDKQVLFTSDVHGKPALYLATL 382



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 30/182 (16%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILR-V 239
                 ++   + +++ DG+N+R + T +  +      + P+   + Y +Y      R +
Sbjct: 207 HEGPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYMKGSPDRFI 266

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDI------YSVD 288
           Y  D       +         L   +       +G  A + VQ D    I      Y  +
Sbjct: 267 YSADPETLENRQLTSMPACSHLMSNYDGTLMVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326

Query: 289 LQSNATERLTNTLFINIS--------------ASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +++    R+      + S               S++PD  Q++F SD  GK  LY+    
Sbjct: 327 MKNGTQHRIARH---DTSWKVFEGDRQVTHPHPSFTPDDKQVLFTSDVHGKPALYLATLP 383

Query: 335 GS 336
            S
Sbjct: 384 ES 385



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 73/210 (34%), Gaps = 22/210 (10%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           P  +   R+      F+ +G + L     D   + Y +DL +    +LT     N    +
Sbjct: 28  PPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGF 87

Query: 310 -SPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPV------------- 353
            SPD   + +  D     ++ +     S   ++        ++                 
Sbjct: 88  LSPDDDALFYVKDGRNLMRVDLASLEESVVYQVPEEWVGYGTWVANSDCTKLVGIEIKRE 147

Query: 354 -WSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSP-SGRSLIFSR 408
            W P  D   F +F   K    +M+ D   G    +L E+  L  P + P    ++ F  
Sbjct: 148 DWQPLTDWKKFHEFYFTKPCCRLMRVDLKTGESAVILQENQWLGHPIYRPYDDNTVAFCH 207

Query: 409 KKDGDT-GSKLYSIDLNGRNETLINTPAYA 437
           +   D   ++++ I+ +G N   + T A  
Sbjct: 208 EGPHDLVDARMWLINEDGSNMRKVKTHAEG 237



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 50/315 (15%), Positives = 97/315 (30%), Gaps = 51/315 (16%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +D         +    +P       H   +  YQ      G   S++LF      +    
Sbjct: 11  FDTYQDASTGAQVTRLTPPDV--TCHR--NYFYQKCFTRDG---SKLLF----GGAFDGP 59

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +  ++D +      LT  R    F    SP+   + Y   D  +++RV L         
Sbjct: 60  WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVK-DGRNLMRVDLASLEESVVY 118

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +    +            G          +   +  ++++    + LT+           
Sbjct: 119 QVPEEWVGY---------GTWVA----NSDCTKLVGIEIKREDWQPLTDWK--------- 156

Query: 311 PDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFS 367
               +  F      K   +L  +     +   I Q+ +     P++ P   + +AF    
Sbjct: 157 -KFHEFYFT-----KPCCRLMRVDLKTGESAVILQENQW-LGHPIYRPYDDNTVAFCHEG 209

Query: 368 GEKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   + ++ +DGS  R +    E  +     W P G +L++     G     +YS 
Sbjct: 210 PHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYMKGSPDRFIYSA 269

Query: 422 DLNG-RNETLINTPA 435
           D     N  L + PA
Sbjct: 270 DPETLENRQLTSMPA 284


>gi|158318483|ref|YP_001510991.1| WD-40 repeat-containing protein [Frankia sp. EAN1pec]
 gi|158113888|gb|ABW16085.1| WD-40 repeat protein [Frankia sp. EAN1pec]
          Length = 540

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/294 (14%), Positives = 96/294 (32%), Gaps = 24/294 (8%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D + +       +   W      I++   Q +TG    ++        ++ S    +++ 
Sbjct: 265 DGRTLASASQDGTARLW-----DIAERTSQPLTGRIAVWSVAFSPDKHTLASANGDSTVQ 319

Query: 195 VMD-RDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           + D  +G     +   P     +    FSP+ + +A A+ D      V L D        
Sbjct: 320 LWDVAEGTLPHPVASLPGHSDAVGSVAFSPDGRTLASASDDH----TVRLWDVATGTTTH 375

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            + +    + +  FS +G+    S   D  + ++ V  +      L       +S ++SP
Sbjct: 376 TLTDHTGPVNSVAFSRDGRTLA-SASDDHTVRLWDV-AEGTLLRTLPGHTEPVMSVAFSP 433

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSG 368
           D   +   S       + +         R+     D         +SP G ++A      
Sbjct: 434 DRRTLASASQ---DNTVRLWDVAARTAPRLVGSLSDHTHWVMSVAFSPDGRILASASQD- 489

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +  +    +   L      + +  +S  GR+L  +     D   +L+ + 
Sbjct: 490 RTVRLWDVAARTTTHTLTGHTGPVFSVAFSLDGRTLASASD---DNTVRLWDMS 540



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + +    + +  FS +G+    S  +D    ++  D+    ++ LT  + +  S ++SPD
Sbjct: 250 LRDHTDSVRSVAFSRDGRTLA-SASQDGTARLW--DIAERTSQPLTGRIAV-WSVAFSPD 305

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              +   ++ +   QL+ +          S      +     +SP G  +A +       
Sbjct: 306 KHTLA-SANGDSTVQLWDVAEGTLPHPVASLPGHSDAVGSVAFSPDGRTLA-SASDDHTV 363

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +  +    +   L      + +  +S  GR+L  +     D   +L+ +
Sbjct: 364 RLWDVATGTTTHTLTDHTGPVNSVAFSRDGRTLASASD---DHTVRLWDV 410


>gi|307299059|ref|ZP_07578861.1| WD40 domain protein beta Propeller [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306915484|gb|EFN45869.1| WD40 domain protein beta Propeller [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 649

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 356 PQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           P G    F + +  K        I +      + R L       +P  SP G+S++F  K
Sbjct: 22  PGGKNFVFVRKTMNKKENQYESNIWLGNMKNEEVRQLTRGGKDGSPVVSPDGKSILFVSK 81

Query: 410 KDGDT-GSKLYSIDLNGRNETLINT-PAYASDPQWV 443
           +D +  G+ LY + L G    L+ T     S   W+
Sbjct: 82  RDKEAKGTGLYLLPLEGGESRLVKTLKGGFSSVSWI 117



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 75/231 (32%), Gaps = 32/231 (13%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRA---PKRIGNFRSMILAPRFSSNGKRALISVQ 277
           P  +   +           Y  +  +        R         +P  S +GK  L   +
Sbjct: 22  PGGKNFVFVRKTMNKKENQYESNIWLGNMKNEEVRQLTRGGKDGSPVVSPDGKSILFVSK 81

Query: 278 KDEAMD---IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +D+      +Y + L+   +  +        S S+  DS  ++F              + 
Sbjct: 82  RDKEAKGTGLYLLPLEGGESRLVKTLKGGFSSVSWI-DSETVLF----------MTKHAP 130

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKK-DGSQERLLV 387
           G D ++I +D+             D I F   +G  F       +  MK  +G  E +  
Sbjct: 131 GEDPEKIEEDEPPEKKVYEI----DRIPFVS-NGAGFTENRVGHLYKMKLENGKMEPITA 185

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTG---SKLYSIDLNGRNETLINTPA 435
              ++++   SP  +S+     +D +     S LY +DL       I   +
Sbjct: 186 VGGDIESIVLSPERKSVAVITTEDREKRPIWSSLYLLDLQSETAKRIGDDS 236



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 83/266 (31%), Gaps = 21/266 (7%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-- 234
            +FV +++     +    +   +  N      +R      P  SP+ + + + +  D+  
Sbjct: 27  FVFVRKTMNKKENQYESNIWLGNMKNEEVRQLTRGGKDGSPVVSPDGKSILFVSKRDKEA 86

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               +YL+        + +   +    +  +  + +  L   +     D   ++      
Sbjct: 87  KGTGLYLLPLE-GGESRLVKTLKGGFSSVSW-IDSETVLFMTKHAPGEDPEKIEEDEPPE 144

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +++     I+     S  +    F  +R G   LY M+      + I+          V 
Sbjct: 145 KKV---YEIDRIPFVSNGAG---FTENRVG--HLYKMKLENGKMEPITAVG-GDIESIVL 195

Query: 355 SPQGDLIAFTKFSGEK-----FAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSR 408
           SP+   +A       +      ++ ++       + + +DS       WS        + 
Sbjct: 196 SPERKSVAVITTEDREKRPIWSSLYLLDLQSETAKRIGDDSLSFYHCEWSDDSELFAVAT 255

Query: 409 K--KDGDTGSKLYSIDLNGRNETLIN 432
              K   T   +  +DL     T + 
Sbjct: 256 DFKKGFPTNPFIVHVDLESFTLTTLA 281


>gi|85709256|ref|ZP_01040321.1| putative enzyme [Erythrobacter sp. NAP1]
 gi|85687966|gb|EAQ27970.1| putative enzyme [Erythrobacter sp. NAP1]
          Length = 690

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 59/366 (16%), Positives = 122/366 (33%), Gaps = 48/366 (13%)

Query: 113 TGRVIKEGKDRLRVEF---RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            G +        R+ +    L DV + +   G K   S A+   IA        + ++  
Sbjct: 37  VGAIAISPDGT-RIAYTTGSLPDVTEGEDNGGFKSQLSIATGPDIARQFLP---EDVSPG 92

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-- 227
              F+     ++ +        ++  +  DG     L   +D  + + RFSP+ + +   
Sbjct: 93  DVSFSPDGRMLTFTWSKDDEDTAVWGVPVDGGTYMKLAAVKDSGVRDYRFSPDGRTIYMM 152

Query: 228 ----------------YATYDDEDILRV-------YLMDTRIDRAPKRIGNFRSMILAPR 264
                           + +   E+  R         +MD  ID  P+ I      + A  
Sbjct: 153 VGPAKDEQREAQAKGGFTSKVYEEEFRPARMFAANIMMDGEIDEEPREIA-LPGYVSAFD 211

Query: 265 FSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            + +G   +I       +D       +  +DL S     +  T         SPD SQ+ 
Sbjct: 212 IAPDGSFGIIETTPTPLVDDSYTSKRVNVIDLASGDVRAVVETPGKLGDVEISPDGSQLS 271

Query: 318 FESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +  +  +     L+++ +   D + I+  +  +  D  W   G L+      G +  +
Sbjct: 272 LIAGVDMNDPAATTLHLVDTATGDFRAINAGEPLATVDAEWLSDGRLMTVVHR-GVQSEV 330

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            V   DG+   ++     +     +  G  + F+        ++L+  + NG  E     
Sbjct: 331 HVHNADGTLAEVIDPGELILTGVEAA-GDHVAFTANAP-QHPTELFVWN-NGAFERWTEH 387

Query: 434 PAYASD 439
             + S+
Sbjct: 388 NEWLSE 393



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 36/91 (39%), Gaps = 12/91 (13%)

Query: 348 SYFDPVWSPQGDLIAFTKFS---------GEKFAIGVMKKDGSQ--ERLLVEDSNLQAPT 396
           S      SP G  IA+T  S            F   +    G     + L ED +    +
Sbjct: 36  SVGAIAISPDGTRIAYTTGSLPDVTEGEDNGGFKSQLSIATGPDIARQFLPEDVSPGDVS 95

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           +SP GR L F+  KD D  + ++ + ++G  
Sbjct: 96  FSPDGRMLTFTWSKD-DEDTAVWGVPVDGGT 125


>gi|332256122|ref|XP_003277166.1| PREDICTED: WD repeat and SOCS box-containing protein 1 isoform 1
           [Nomascus leucogenys]
          Length = 421

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC---SVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 268 GALLATASYDT---RVYIWDPHNGD--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 322

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 323 GLHVA---SLADDKMVRFWRIDED 343



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 80/259 (30%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++           R +  T + D               ++ VS S   
Sbjct: 151 RIKIWDVYTGKLLL--NLVDHTEVVRDL--TFAPD-------------GSLILVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L +   
Sbjct: 194 TL---RVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSMLCSV----GASKAVFLWNMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + I+  D  +               
Sbjct: 246 YTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFPPPT 302

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   +   +D +   + + +  +     +++          
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 357

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 358 AFSTDGSVLAAGTHDGSVY 376



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L +   +    +++PD S I+  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K + +  +   +   +SP   ++     S   F +  M K     +L     
Sbjct: 200 LKDDGNMMKVL-RGHQNWVYSCAFSPDSSMLCSVGASKAVF-LWNMDKYTMIRKLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 258 DVVACDFSPDGALLATASY 276


>gi|18677720|ref|NP_056441.6| WD repeat and SOCS box-containing protein 1 isoform 1 [Homo
           sapiens]
 gi|20532298|sp|Q9Y6I7|WSB1_HUMAN RecName: Full=WD repeat and SOCS box-containing protein 1;
           Short=WSB-1; AltName: Full=SOCS box-containing WD
           protein SWiP-1
 gi|4754060|gb|AAD28808.1|AF072880_1 SOCS box-containing WD protein SWiP-1 [Homo sapiens]
 gi|7145106|gb|AAD20954.2| WSB1 protein [Homo sapiens]
 gi|18088900|gb|AAH21110.1| WD repeat and SOCS box-containing 1 [Homo sapiens]
 gi|119571412|gb|EAW51027.1| WD repeat and SOCS box-containing 1, isoform CRA_b [Homo sapiens]
 gi|119571415|gb|EAW51030.1| WD repeat and SOCS box-containing 1, isoform CRA_b [Homo sapiens]
 gi|312151424|gb|ADQ32224.1| WD repeat and SOCS box-containing 1 [synthetic construct]
          Length = 421

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC---SVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 268 GALLATASYDT---RVYIWDPHNGD--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 322

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 323 GLHVA---SLADDKMVRFWRIDED 343



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 80/259 (30%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++           R +  T + D               ++ VS S   
Sbjct: 151 RIKIWDVYTGKLLL--NLVDHTEVVRDL--TFAPD-------------GSLILVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L +   
Sbjct: 194 TL---RVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSMLCSV----GASKAVFLWNMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + I+  D  +               
Sbjct: 246 YTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFPPPT 302

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   +   +D +   + + +  +     +++          
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 357

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 358 AFSTDGSVLAAGTHDGSVY 376



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L +   +    +++PD S I+  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K + +  +   +   +SP   ++     S   F +  M K     +L     
Sbjct: 200 LKDDGNMMKVL-RGHQNWVYSCAFSPDSSMLCSVGASKAVF-LWNMDKYTMIRKLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 258 DVVACDFSPDGALLATASY 276


>gi|317126370|ref|YP_004100482.1| hypothetical protein Intca_3272 [Intrasporangium calvum DSM 43043]
 gi|315590458|gb|ADU49755.1| hypothetical protein Intca_3272 [Intrasporangium calvum DSM 43043]
          Length = 350

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 51/314 (16%), Positives = 104/314 (33%), Gaps = 39/314 (12%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF-- 215
           +S  +      E   F+  I            +  +  +      +R +T  R       
Sbjct: 36  VSSKLPPWFFREIAYFSYAIPTTGPVDGETTAQEDIFTVSVLTGTVRRITDDRSLAEMKS 95

Query: 216 --EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             +P +SP    +A  T    +  R+ ++D       + +        +P +  +     
Sbjct: 96  DRDPAWSPTHTSLAIHTATGGEESRIAVIDRATGAVLQNL--VPGH--SPEWLDDDTILY 151

Query: 274 ISV----QKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIV-FESDREGK 325
           + +     +D   D++ VD  +    R+T+      I  S S+ P +   V +  +    
Sbjct: 152 LGIVEPGTQDARADVFCVDTATVTVTRITDVGLGGSI-GSISWHPSAGLAVGYTEEAGPS 210

Query: 326 EQLYVM----------QSNGSDQKR----ISQDKEASYFDPVWSPQGDLIAFTKF-SGEK 370
            +  +           +S GS   R         E     P WSP GD IA + +  G  
Sbjct: 211 PRYSIAVIPAAAVGMARSTGSPVVRAGFTFVTSAETLAATPDWSPSGDRIAVSTWTDGGP 270

Query: 371 FAIGVMKKDGSQERLLVEDS------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +G++    S   L+              P +S  GR L F+R ++ +  S+++   + 
Sbjct: 271 GRVGILTIATSSLDLVAGPGPAEPTLRDFGPVFSRDGRLLAFTRGEEDEW-SEIWLHTIA 329

Query: 425 GRNETLINTPAYAS 438
             +   +     + 
Sbjct: 330 SGHHRQLTDDRRSR 343



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/105 (10%), Positives = 41/105 (39%), Gaps = 9/105 (8%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLFI------NI 305
           + +  ++   P +S +G R  +S   D     +  + + +++ + L            + 
Sbjct: 241 VTSAETLAATPDWSPSGDRIAVSTWTDGGPGRVGILTIATSSLD-LVAGPGPAEPTLRDF 299

Query: 306 SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASY 349
              +S D   + F   + +   ++++        ++++ D+ + +
Sbjct: 300 GPVFSRDGRLLAFTRGEEDEWSEIWLHTIASGHHRQLTDDRRSRF 344


>gi|260591017|ref|ZP_05856475.1| putative dipeptidyl aminopeptidase IV [Prevotella veroralis F0319]
 gi|260536882|gb|EEX19499.1| putative dipeptidyl aminopeptidase IV [Prevotella veroralis F0319]
          Length = 734

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 95/322 (29%), Gaps = 69/322 (21%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDED 235
             + L V ++ G   +  T     I++                +SP   ++A+   D   
Sbjct: 158 RNHQLFVTEKSGKEHQLTTDGSSDIVYGQSVHRDEFGINGGLFWSPKGNRLAFYRMDQSM 217

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAP-------------------------------- 263
           +    L+D          G  R+   AP                                
Sbjct: 218 VSAYPLVDIPELDWTPEKGESRAAKAAPIRYPMAGETSHKVTVGVYDASTGKVLYLQAGD 277

Query: 264 ---------RFSSNGKRAL-ISVQKDEAM-DIYSVDLQSNA----TERLTNTLFIN-ISA 307
                     +S + K      V +D+    + S D  +        R T+  ++     
Sbjct: 278 PTDRYFTNIAWSPDEKTIYMFEVNRDQNDCRLVSYDATTGKKLKELYRETDAKYVEPTHP 337

Query: 308 -SYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             + P + ++ + +S ++G   +Y+    G   K+++  K        ++ +   I +  
Sbjct: 338 IVFLPWNDNEFILQSQKDGYNHIYLFNKEGQQIKQLTSGKWVVIDVLGFNTKQKSIVYVS 397

Query: 366 F--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +  +    ++     +  LL         T S  G  L+        T  + Y I  
Sbjct: 398 NECNPIQRNTWLVNVSTGKRTLLDNGRGYHFATLSKDGGMLL--DNYSEPTVPRKYDIIA 455

Query: 424 NGRNETLINTPAYASDPQWVGF 445
            G N    N    A +P W G+
Sbjct: 456 VGANPQRTNYFT-APNP-WKGY 475


>gi|21233376|ref|NP_639293.1| hypothetical protein XCC3954 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66770339|ref|YP_245101.1| hypothetical protein XC_4042 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21115212|gb|AAM43175.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66575671|gb|AAY51081.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
          Length = 293

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 61/191 (31%), Gaps = 25/191 (13%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATERLT----NTLFINI 305
           + +  +       S +G+R + +  +       D++   L     ++ T    NT     
Sbjct: 33  VVSTPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLVGGRWQQATSLPLNTAQDET 92

Query: 306 SASYSPDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSP 356
           +  +S +   ++F S R    G   LY +  +   Q    Q      +  ++   P  S 
Sbjct: 93  TPVFSANGRWLLFASTRAGGVGGSDLYRVPVDAQGQLGAVQSLGPAINNRSNETAPTLSL 152

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLIFS 407
            G  + F            + V   +GS          + +        W   GR+L+++
Sbjct: 153 DGTALLFASDGHGGAGGLDLFVAHWNGSAFIAPAALGEVNSAADERDAAWLGDGRALVWA 212

Query: 408 RKKDGDTGSKL 418
           R         L
Sbjct: 213 RGTSAGPSQLL 223



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 24/170 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ---DKEASYFDP 352
           +T      A+ SPD  +IV+ SDR    G   L+  Q  G   ++ +    +       P
Sbjct: 35  STPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLVGGRWQQATSLPLNTAQDETTP 94

Query: 353 VWSPQGDLIAFTKFSGEKF---AIGVMKKD-----GSQERL---LVEDSNLQAPTWSPSG 401
           V+S  G  + F            +  +  D     G+ + L   +   SN  APT S  G
Sbjct: 95  VFSANGRWLLFASTRAGGVGGSDLYRVPVDAQGQLGAVQSLGPAINNRSNETAPTLSLDG 154

Query: 402 RSLIFSRK-KDGDTGSKLYSIDLNGRNETL------INTPAYASDPQWVG 444
            +L+F+     G  G  L+    NG           +N+ A   D  W+G
Sbjct: 155 TALLFASDGHGGAGGLDLFVAHWNGSAFIAPAALGEVNSAADERDAAWLG 204



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 22/168 (13%)

Query: 220 SPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ Q++ +A+         D+ +  L+  R  +A     N       P FS+NG+  L 
Sbjct: 46  SPDGQRIVWASDRAGGAGGWDLWQAQLVGGRWQQATSLPLNTAQDETTPVFSANGRWLLF 105

Query: 275 SVQKD---EAMDIYSVDLQS----NATERL---TNTLFINISASYSPDSSQIVFESDREG 324
           +  +       D+Y V + +     A + L    N      + + S D + ++F SD  G
Sbjct: 106 ASTRAGGVGGSDLYRVPVDAQGQLGAVQSLGPAINNRSNETAPTLSLDGTALLFASDGHG 165

Query: 325 KEQ---LYVMQSNGSDQKRISQDKEASY----FDPVWSPQGDLIAFTK 365
                 L+V   NGS     +   E +      D  W   G  + + +
Sbjct: 166 GAGGLDLFVAHWNGSAFIAPAALGEVNSAADERDAAWLGDGRALVWAR 213



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 47/180 (26%), Gaps = 28/180 (15%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTP---SRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +     G     L      G   +  T    +  Q    P FS N + + +A+     + 
Sbjct: 55  ASDRAGGAGGWDLWQAQLVGGRWQQATSLPLNTAQDETTPVFSANGRWLLFASTRAGGVG 114

Query: 238 RVYLMDTRIDRAPKRIG--------NFRSMILAPRFSSNGKRALISVQKDE--------- 280
              L    +D   +           N RS   AP  S +G   L +              
Sbjct: 115 GSDLYRVPVDAQGQLGAVQSLGPAINNRSNETAPTLSLDGTALLFASDGHGGAGGLDLFV 174

Query: 281 ---AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGS 336
                  +             N+      A++  D   +V+      G  QL +    G 
Sbjct: 175 AHWNGSAFIAPAALGEV----NSAADERDAAWLGDGRALVWARGTSAGPSQLLLAACKGG 230


>gi|196230352|ref|ZP_03129214.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
 gi|196225282|gb|EDY19790.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
          Length = 446

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 70/208 (33%), Gaps = 8/208 (3%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             + + D D   +        + +    +     ++A A         V L+D   +  P
Sbjct: 173 YEVTIWDLDTGALVRRIGGLPERISALAWHRKTGELAVAGGSPAQWGTVILIDPSPNAEP 232

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASY 309
           + + +   M L   F+ +G +   +   D  + ++  D++S     +  N      S +Y
Sbjct: 233 RFLCDLPDMALCVAFNPDGTQLA-AGSADRTIRLF--DVKSGKQAHIMRNHADWVQSVAY 289

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD +  V  S R+   ++    +   + +      E + +  ++S  GD +  +     
Sbjct: 290 SPDGTH-VLSSSRDRTVRIS--SAATGELESTYTGHETAVYAAIFSHDGDTVL-SLAQNS 345

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                       + +      + +   W
Sbjct: 346 PLDYWKWTTTEKKPKRTDVAGHPERLAW 373



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 68/193 (35%), Gaps = 17/193 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-V 276
            FSP+  ++A + Y       V + D       +RIG     I A  +        ++  
Sbjct: 159 AFSPDGTQLAVSGY-----YEVTIWDLDTGALVRRIGGLPERISALAWHRKTGELAVAGG 213

Query: 277 QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSN 334
              +   +  +D   NA  R L +   + +  +++PD +Q+   S DR     + +    
Sbjct: 214 SPAQWGTVILIDPSPNAEPRFLCDLPDMALCVAFNPDGTQLAAGSADRT----IRLFDVK 269

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNL 392
              Q  I ++         +SP G  +  +        + +      +        ++ +
Sbjct: 270 SGKQAHIMRNHADWVQSVAYSPDGTHVLSSSRDRT---VRISSAATGELESTYTGHETAV 326

Query: 393 QAPTWSPSGRSLI 405
            A  +S  G +++
Sbjct: 327 YAAIFSHDGDTVL 339



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 17/160 (10%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQ 315
            + I A  FS +G +  +S       ++   DL + A  R    L   ISA ++   + +
Sbjct: 152 PAPITALAFSPDGTQLAVS----GYYEVTIWDLDTGALVRRIGGLPERISALAWHRKTGE 207

Query: 316 IVFESDREGKEQLY----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +       G    +    ++  + + + R   D         ++P G  +A         
Sbjct: 208 LAVA---GGSPAQWGTVILIDPSPNAEPRFLCDLPDMALCVAFNPDGTQLAAGSADRT-- 262

Query: 372 AIGVMK-KDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRK 409
            I +   K G Q  ++   ++  Q+  +SP G  ++ S +
Sbjct: 263 -IRLFDVKSGKQAHIMRNHADWVQSVAYSPDGTHVLSSSR 301


>gi|158312977|ref|YP_001505485.1| WD-40 repeat-containing serine/threonin protein kinase [Frankia sp.
           EAN1pec]
 gi|158108382|gb|ABW10579.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EAN1pec]
          Length = 682

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 87/249 (34%), Gaps = 20/249 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                 D  +    FSP+   +A  ++D    L             + +      + +  
Sbjct: 417 RTPDGPDDGVTSVVFSPDGHTLAGTSWDGSLRLWDVTRPGAPHLLGRPLRAHAGPVRSAA 476

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISASYSPDSSQIVFE- 319
           F+++G+    +   D ++ ++ +     A   L    T       S +++PD   +V   
Sbjct: 477 FATDGRMLA-TGSDDRSVQLWDM-ADRGAPRPLGGPVTGATSFVTSVAFAPDDHLLVAAG 534

Query: 320 SDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGV 375
            DR+    L+   +N    +R+++      S     ++P G  +A     G    + + V
Sbjct: 535 YDRD---VLFWDITNRRAPRRLARIVAGPTSALVAAFAPDGRTLATGGVDGVIRLWDVTV 591

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +  +  R L   D+ + A  ++P GR+L       G   + +   D + R        
Sbjct: 592 PDRPTALGRPLAGHDNRVWALAFAPDGRTLA-----SGGFDNVVRLWDTSDRTRARPRGR 646

Query: 435 AYASDPQWV 443
             A    WV
Sbjct: 647 PLAGHADWV 655



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 81/235 (34%), Gaps = 20/235 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM----ILA 262
                  +    FSP+   +A +  D E    V L D     AP+ +G         + +
Sbjct: 373 LAGHGGWVLSADFSPDGMIMATSAKDGE----VLLWDVAEPAAPRLVGRTPDGPDDGVTS 428

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFE 319
             FS +G         D ++ ++ V            L        SA+++ D   +   
Sbjct: 429 VVFSPDGHTLA-GTSWDGSLRLWDVTRPGAPHLLGRPLRAHAGPVRSAAFATDGRMLATG 487

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEK--FAIGV 375
           SD +   QL+ M   G+ +        A+ F     ++P   L+    +  +   + I  
Sbjct: 488 SD-DRSVQLWDMADRGAPRPLGGPVTGATSFVTSVAFAPDDHLLVAAGYDRDVLFWDITN 546

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +      R++   ++     ++P GR+L        D   +L+ + +  R   L
Sbjct: 547 RRAPRRLARIVAGPTSALVAAFAPDGRTLA---TGGVDGVIRLWDVTVPDRPTAL 598



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 49/153 (32%), Gaps = 9/153 (5%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-----SRDQILFEPRFSPNQQKVA 227
           F + + F  +  +         V+  D  N R         +         F+P+ + +A
Sbjct: 517 FVTSVAFAPDDHLLVAAGYDRDVLFWDITNRRAPRRLARIVAGPTSALVAAFAPDGRTLA 576

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
               D    L    +  R     + +    + + A  F+ +G+    S   D  + ++  
Sbjct: 577 TGGVDGVIRLWDVTVPDRPTALGRPLAGHDNRVWALAFAPDGRTLA-SGGFDNVVRLWDT 635

Query: 288 DLQSNATER---LTNTLFINISASYSPDSSQIV 317
             ++ A  R   L       +S  ++P    + 
Sbjct: 636 SDRTRARPRGRPLAGHADWVMSVRFAPHGRILA 668


>gi|313675126|ref|YP_004053122.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312941824|gb|ADR21014.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 699

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/256 (18%), Positives = 89/256 (34%), Gaps = 41/256 (16%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             I     FS N Q        ++D +   L      +    I   +    AP  S+NG+
Sbjct: 10  SIIACFFAFSSNAQ-------SEKDSIEQVLDSLYPKKIVSEISTDQHTEYAPSISANGR 62

Query: 271 RALISVQKDEAMDIYSV---DLQSNATERLTN----TLFINI--SASYSPDSSQIVFESD 321
             +    KD +  +Y     + Q +    L +       I++    ++S D ++I F + 
Sbjct: 63  TLIYESNKDGSWKLYLTRFENDQWSNEIPLDSINNYGDSIDVISGPNFSYDGNRIYFHAS 122

Query: 322 REGKEQ---LYVMQSNG---SDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEK--- 370
            +G      ++  +  G   +  + +  D  +  FD  P  +  G  + F + S      
Sbjct: 123 FDGGYGSEDIFYSERVGDSWTKPQNLGPDVNSRSFDGFPTITTDGKTLYFARNSKNIPEG 182

Query: 371 -----FAIGVMKKDGSQERLLV------EDSNLQAPTWSPSGRSLIFSRKKDGD-TGSKL 418
                + I   +K  S                 +AP      R+LIF+  ++G   G  L
Sbjct: 183 VSEFCYEIYATQKTDSGWTEPTALPYPVNLGCEKAPKIMADNRTLIFASYREGGIGGFDL 242

Query: 419 Y--SIDLNGRNETLIN 432
           Y   ++ +G   T + 
Sbjct: 243 YQTQLNADGDWTTPVP 258


>gi|312889817|ref|ZP_07749363.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Mucilaginibacter paludis DSM 18603]
 gi|311297743|gb|EFQ74866.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Mucilaginibacter paludis DSM 18603]
          Length = 730

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 80/250 (32%), Gaps = 50/250 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP------RFSSNGKR 271
            ++ +  +  Y    D  I  +   D                  +P       FS +GK+
Sbjct: 33  SWATDGYQ--YYVARDGGIAELDTRDASKQTLVVSSAMLTPQGGSPIRVRRFAFSGDGKK 90

Query: 272 ALI------SVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDRE 323
            LI        + D   D +  DL +   +++      +  + A  SPD  +  + S+  
Sbjct: 91  ILINTNTRKVWRYDTRGDYWVYDLAAKTLKQVGKNRPESSLMFAKLSPDGLKAAYVSEH- 149

Query: 324 GKEQLYVMQSNGSDQKRISQDK---------EASY-------FDPVWSPQGDLIAFTKFS 367
               +YV        K+++ D          + +Y           WSP G  IA+ +  
Sbjct: 150 ---NIYVEDLASGAVKQLTGDGTKKLINGTFDWAYEEEFDCRDGFRWSPDGKSIAYWQLD 206

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             K    +M          +  ++   P   P    + +       +  ++  ++ +G N
Sbjct: 207 ASKTKNYLM----------LNTTDSVYPYVVP----VEYPVAGQDPSLCRIGVVNADGGN 252

Query: 428 ETLINTPAYA 437
            T +  P  A
Sbjct: 253 TTWLKVPGDA 262



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 95/287 (33%), Gaps = 79/287 (27%)

Query: 218 RFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFR--SMILAPRFSSNGKR 271
            FS + +K+   T   +    D    Y +     +  K++G  R  S ++  + S +G +
Sbjct: 83  AFSGDGKKILINTNTRKVWRYDTRGDYWVYDLAAKTLKQVGKNRPESSLMFAKLSPDGLK 142

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLT-----------NTLFIN------ISASYSPDSS 314
           A    + +    IY  DL S A ++LT                           +SPD  
Sbjct: 143 AAYVSEHN----IYVEDLASGAVKQLTGDGTKKLINGTFDWAYEEEFDCRDGFRWSPDGK 198

Query: 315 QIVF---------------ESDR------------EGKE----QLYVMQSNGSDQKRISQ 343
            I +                +D              G++    ++ V+ ++G +   +  
Sbjct: 199 SIAYWQLDASKTKNYLMLNTTDSVYPYVVPVEYPVAGQDPSLCRIGVVNADGGNTTWLKV 258

Query: 344 DKEASYFDP---VWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLV------------ 387
             +A         W+   ++I      +  +  + +      + R +             
Sbjct: 259 PGDAIQHYIPRMEWANANEIILQQLNRAQTESKVLLCNAKSGEARAVYGEKDNAWIDTKS 318

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                +     W   G++ +++ +KDG     LY + L+G+ ETLI 
Sbjct: 319 NWNGGSPMGWEWIEKGKAFVWASEKDG--WRHLYRVSLDGK-ETLIT 362



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 69/197 (35%), Gaps = 20/197 (10%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFE-PR--FSPNQQKVAYATYDDEDILRVYLMDTRID 247
             + V++ DG N  +L    D I    PR  ++   + +       +   +V L + +  
Sbjct: 241 CRIGVVNADGGNTTWLKVPGDAIQHYIPRMEWANANEIILQQLNRAQTESKVLLCNAKSG 300

Query: 248 RAPKRIGNFRSMILA--PRF---SS-------NGKRALISVQKDEAMDIYSVDLQSNATE 295
            A    G   +  +     +   S         GK  + + +KD    +Y V L      
Sbjct: 301 EARAVYGEKDNAWIDTKSNWNGGSPMGWEWIEKGKAFVWASEKDGWRHLYRVSLDGK-ET 359

Query: 296 RLTNTLFINISAS-YSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDP 352
            +T   +  I  +     +  I F +  +   Q  LY ++ +G   +RIS   E      
Sbjct: 360 LITKGNYDVIKINLIDEAAGYIYFIASPDNPTQRYLYRVKISGGTAQRISPANEPGTHGY 419

Query: 353 VWSPQGDLIAFTKFSGE 369
             SP G  IA   FS  
Sbjct: 420 EISPNGK-IAIHNFSNS 435


>gi|283836116|ref|ZP_06355857.1| hypothetical protein CIT292_10535 [Citrobacter youngae ATCC 29220]
 gi|291068303|gb|EFE06412.1| putative cytoplasmic protein [Citrobacter youngae ATCC 29220]
          Length = 408

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 12/122 (9%)

Query: 310 SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +P +S I F   D +G  QL+++   G + +++++          W P G  + F   + 
Sbjct: 294 NPQASDIAFLMRDDQGVAQLWLISPRGGEPRQLTRCATGIQSAFNWHPSGKWLGFVLEN- 352

Query: 369 EKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               I        +   L E      +  A  +SP GR + +  + +G    +L+  D  
Sbjct: 353 ---RIACCDAQTGEIDFLTERHGNPPSADAVVFSPDGRQVAWMEEVEGFR--QLWVTD-T 406

Query: 425 GR 426
           GR
Sbjct: 407 GR 408



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 15/146 (10%)

Query: 200 GANIRYLTPSRD----QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           G + R LT + D     +L +PR     +P    +A+   DD+ + +++L+  R     +
Sbjct: 266 GIHQRRLTFTHDRAFPGLLNQPRHWVRSNPQASDIAFLMRDDQGVAQLWLISPRGGEPRQ 325

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---S 308
                  +  A  +  +GK     ++      I   D Q+   + LT       SA    
Sbjct: 326 LTRCATGIQSAFNWHPSGKWLGFVLEN----RIACCDAQTGEIDFLTERHGNPPSADAVV 381

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSN 334
           +SPD  Q+ +  + EG  QL+V  + 
Sbjct: 382 FSPDGRQVAWMEEVEGFRQLWVTDTG 407



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 35/104 (33%), Gaps = 3/104 (2%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT     I     + P+ + + +    +  I        
Sbjct: 305 RDDQGVAQLWLISPRGGEPRQLTRCATGIQSAFNWHPSGKWLGFVL--ENRIACCDAQTG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            ID   +R GN  S   A  FS +G++     + +    ++  D
Sbjct: 363 EIDFLTERHGNPPSAD-AVVFSPDGRQVAWMEEVEGFRQLWVTD 405


>gi|116621952|ref|YP_824108.1| WD40 domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225114|gb|ABJ83823.1| WD40 domain protein beta Propeller [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 364

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/340 (14%), Positives = 116/340 (34%), Gaps = 71/340 (20%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           GKK  + P+   + A  +++     +T    D+++ +       ++      LC  DR G
Sbjct: 25  GKKAEAFPSDAARYADPLTELDVYRLTKP--DYSTTMTAYFNRGIARNSSWMLCCCDRTG 82

Query: 201 A-----------NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
                       +++ LT  +D        +P+ ++  +       +    +   +    
Sbjct: 83  GPQAFHLDLKNGDMKQLTDVQDLDGTSLTLTPDNRQ--FCYLAGRSLYIAMVSSLKEREL 140

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K    +    L+     +G  A +  ++ EA  +  V L   A+  +T + F+  +   
Sbjct: 141 YKVPEGWEPGGLSVG--PDGTHATLVEKRGEASRLRMVTLVQGASRTVTESPFVISAPIA 198

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P  +Q ++   R+G E ++++ ++G+  +++ +        P WS  G  + +  F  +
Sbjct: 199 RPMRAQFLY---RQGGEAVWMVNADGTQNRKL-KLAAGGVGTPNWSSDGRTLLYLNFPED 254

Query: 370 K---FAIGVMKKDGSQERLLVEDSNLQA-------------------------------- 394
           K     +     D   ++++ + S   +                                
Sbjct: 255 KTQVNNLRECTPDTGADKMIGKTSQFASFGANRDASVFVGASRNASPAVLLLLRAAHSER 314

Query: 395 -------------PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                        P +SP  + + F   + G     +YS+
Sbjct: 315 ALCEHKSKAEWVSPVFSPDSQRIYFQSDRHGK--PAIYSM 352



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 54/156 (34%), Gaps = 8/156 (5%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV- 287
           A +          M        +++      +  P +SS+G+  L     ++   + ++ 
Sbjct: 203 AQFLYRQGGEAVWMVNADGTQNRKLKLAAGGVGTPNWSSDGRTLLYLNFPEDKTQVNNLR 262

Query: 288 --DLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRI-SQ 343
                + A + +  T      AS+  +    VF  + R     + ++      ++ +   
Sbjct: 263 ECTPDTGADKMIGKTS---QFASFGANRDASVFVGASRNASPAVLLLLRAAHSERALCEH 319

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             +A +  PV+SP    I F      K AI  M  +
Sbjct: 320 KSKAEWVSPVFSPDSQRIYFQSDRHGKPAIYSMHVE 355



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 72/200 (36%), Gaps = 18/200 (9%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRA-LISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           P R G   S + A R  + GK+A           D     L      RLT   +     +
Sbjct: 6   PTRRGLLLSGLAAARIFAEGKKAEAFPSDAARYAD----PLTELDVYRLTKPDYSTTMTA 61

Query: 309 Y-----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           Y     + +SS ++   DR G  Q + +     D K+++  ++        +P      F
Sbjct: 62  YFNRGIARNSSWMLCCCDRTGGPQAFHLDLKNGDMKQLTDVQDLDGTSLTLTPDNRQ--F 119

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYS 420
              +G    I ++     +ER L +      P   +  P G       K+   +  ++ +
Sbjct: 120 CYLAGRSLYIAMVS--SLKERELYKVPEGWEPGGLSVGPDGTHATLVEKRGEASRLRMVT 177

Query: 421 IDLNGRNETLINTPAYASDP 440
           + + G + T+  +P   S P
Sbjct: 178 L-VQGASRTVTESPFVISAP 196


>gi|113477154|ref|YP_723215.1| WD-40 repeat-containing serine/threonine protein kinase
           [Trichodesmium erythraeum IMS101]
 gi|110168202|gb|ABG52742.1| serine/threonine protein kinase with WD40 repeats [Trichodesmium
           erythraeum IMS101]
          Length = 664

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 49/260 (18%), Positives = 94/260 (36%), Gaps = 23/260 (8%)

Query: 170 KGDFNSRILFVSESV--VSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKV 226
            G+  S + F  ++    SG    ++ + D   G     L    D +     FSP+ Q +
Sbjct: 419 HGNSVSSVAFSPDNQMLASGSRDKTIEIWDMKKGKRWFTLLGHSDWVDTV-AFSPDNQML 477

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A           + + + +  R    +   +  +    F+ +G   L S  +D+ + I+ 
Sbjct: 478 A----SGGRDRAIEIWNLQKARRWFTLAGHQDRVYTVAFNKDGG-ILASGGRDQTIKIWD 532

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDK 345
           +  ++     +        S S+SPD    V  S  R+G  +L+ +         I   K
Sbjct: 533 LQ-KAKELFSIQGHSDWVRSLSFSPDGG--VLGSGSRDGTVKLWQVYGGELISTPIQHLK 589

Query: 346 EA--SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSG 401
                     +SP G ++A    +G    I +      +  E L    S++ +  +S  G
Sbjct: 590 YGVSDVLSVGFSPNGKIVAAGYRNG---VINLWDAVTGELLETLNGHSSDVFSVVFSQDG 646

Query: 402 RSLIFSRKKDGDTGSKLYSI 421
           RSL        D   K++ +
Sbjct: 647 RSLA---SGSNDKTIKIWQV 663



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 84/207 (40%), Gaps = 19/207 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  + D      + + D    +    +    + + +  FS + +    S  
Sbjct: 385 AFSPDNQILASGSRDK----TIEIWDMTKGKRWFTLTGHGNSVSSVAFSPDNQMLA-SGS 439

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D+ ++I+ +         L ++ +++  A +SPD+  +       G+++   + +    
Sbjct: 440 RDKTIEIWDMKKGKRWFTLLGHSDWVDTVA-FSPDNQMLA----SGGRDRAIEIWNLQKA 494

Query: 338 QKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--A 394
           ++  +        +   ++  G ++A     G    I +     ++E   ++  +    +
Sbjct: 495 RRWFTLAGHQDRVYTVAFNKDGGILA---SGGRDQTIKIWDLQKAKELFSIQGHSDWVRS 551

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            ++SP G  ++ S  +DG    KL+ +
Sbjct: 552 LSFSPDGG-VLGSGSRDGTV--KLWQV 575



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 95/258 (36%), Gaps = 20/258 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D       +        +    FSP+ Q +A  + D      + + D +
Sbjct: 395 SGSRDKTIEIWDMTKGKRWFTLTGHGNSVSSVAFSPDNQMLASGSRDK----TIEIWDMK 450

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +    +      +    FS + +    S  +D A++I+++  ++     L        
Sbjct: 451 KGKRWFTLLGHSDWVDTVAFSPDNQMLA-SGGRDRAIEIWNLQ-KARRWFTLAGHQDRVY 508

Query: 306 SASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           + +++ D   +       G++Q + +     + +    Q          +SP G ++   
Sbjct: 509 TVAFNKDGGILA----SGGRDQTIKIWDLQKAKELFSIQGHSDWVRSLSFSPDGGVLGSG 564

Query: 365 KFSGEK--FAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              G    + +   +   +  + L    S++ +  +SP+G+ ++ +  ++G     L+  
Sbjct: 565 SRDGTVKLWQVYGGELISTPIQHLKYGVSDVLSVGFSPNGK-IVAAGYRNG--VINLWDA 621

Query: 422 DLNGRNETLINTPAYASD 439
            + G  E L     ++SD
Sbjct: 622 -VTG--ELLETLNGHSSD 636



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 65/177 (36%), Gaps = 11/177 (6%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +    +      + +  FS +  + L S  +D+ ++I+ +  +      LT       
Sbjct: 367 TWKCVLTLTGHFDSVNSVAFSPD-NQILASGSRDKTIEIWDM-TKGKRWFTLTGHGNSVS 424

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFT 364
           S ++SPD+  +   S R+   +++ M+     ++  +    + + D   +SP   ++A +
Sbjct: 425 SVAFSPDNQMLASGS-RDKTIEIWDMK---KGKRWFTLLGHSDWVDTVAFSPDNQMLA-S 479

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   I  ++K      L      +    ++  G  L        D   K++ +
Sbjct: 480 GGRDRAIEIWNLQKARRWFTLAGHQDRVYTVAFNKDGGILA---SGGRDQTIKIWDL 533



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 34/102 (33%), Gaps = 4/102 (3%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                S     +SP   ++A +    +   I  M K      L    +++ +  +SP  +
Sbjct: 375 TGHFDSVNSVAFSPDNQILA-SGSRDKTIEIWDMTKGKRWFTLTGHGNSVSSVAFSPDNQ 433

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            L    +   D   +++ +    R  TL+    +     +  
Sbjct: 434 MLASGSR---DKTIEIWDMKKGKRWFTLLGHSDWVDTVAFSP 472


>gi|294666131|ref|ZP_06731388.1| dipeptidyl peptidase IV [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604098|gb|EFF47492.1| dipeptidyl peptidase IV [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 775

 Score = 61.6 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 58/393 (14%), Positives = 110/393 (27%), Gaps = 98/393 (24%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V      R R+  R  D                A  R         +Y     E G    
Sbjct: 121 VKVTADGRYRLNVR--DTA----------VVCDAGAR------CSKLYAKDKPEPG---- 158

Query: 176 RILFVSESVVSGIIKNSLCVMD----------RDG-ANIRYLTPSRDQILFEPR---FSP 221
            +L   +   + I   +L V D          RDG  N  Y T +      +     +SP
Sbjct: 159 -VLSPDKRSEAFIRDWNLWVRDLASGRETQLTRDGVENFGYATDNAGWQHTDNAVVAWSP 217

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKR----------------------------- 252
           + +K+A    D      +YL+ T++     +                             
Sbjct: 218 DSRKIATFQQDQRKTGDMYLVSTKLGHPELQAWKYPLAGDKDVTMIERVIIDVPTRSVLR 277

Query: 253 ---------------IGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATE 295
                          +     +    +++ + K      + +  +   +   D  + A  
Sbjct: 278 LKTPPDQHRSTLCDDVSCSPGLWDDVKWAPDSKTLAFASTSRFHKQTWLRIADASTGAVR 337

Query: 296 ------RLTNTLFINISASYS--PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                   T      ++A+++  P S++ V+ S+R    QLY+        KR     + 
Sbjct: 338 TAFDETVKTYYESGQVAANWAYLPASNEAVWFSERSDWGQLYLYDLATGKPKRAITTGQG 397

Query: 348 SYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           +  + +        A+    G           +  +  DG +  LL  +    +   SP 
Sbjct: 398 NVTELLRVDPVTRTAWFVGVGRSAGVDPYYQQLWKVSLDGGEPVLLTPEPANHSIALSPD 457

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G   + +          L     +GR  + I T
Sbjct: 458 GARFVDTYSTSVTPPVTLLREAGDGRTVSTIAT 490


>gi|325105828|ref|YP_004275482.1| peptidase S9B dipeptidylpeptidase IV domain protein [Pedobacter
           saltans DSM 12145]
 gi|324974676|gb|ADY53660.1| peptidase S9B dipeptidylpeptidase IV domain protein [Pedobacter
           saltans DSM 12145]
          Length = 724

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/319 (15%), Positives = 99/319 (31%), Gaps = 78/319 (24%)

Query: 191 NSLCVMDRDGANIRYLTPSRD------------QILFEPRFSPNQQKVAYATYDDEDILR 238
           N+  V   D     ++                   L   +FSP+  KVAY +    + + 
Sbjct: 93  NTQKVWRYDTRGDYWVFNRSSKKLSKIGKQQPISSLMFAKFSPDGNKVAYVS---RNNIY 149

Query: 239 VYLMDTRIDRAPKRIGNFRSMIL--------------APRFSSNGKRALIS--------- 275
           V  +D+    A  + G  R +                  R+S +GK              
Sbjct: 150 VEDLDSGAATALTKDGTGRLINGTFDWVYEEEFGCRDGFRWSPDGKSIAYWQLDARKTRN 209

Query: 276 ---VQKDEAMDIYSVDLQ------------------SNATERLTNTLFINISA-----SY 309
              +   ++   +++ ++                  +    R  N     +        +
Sbjct: 210 YLMINNTDSPYPFTIPVEYPVVGEDPSLCRIGVVSANGGDTRWMNIPGDPVQHYIPRMEW 269

Query: 310 SPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFD--PVWSP---------- 356
           +  S  IV + +R     ++ +  S     K I ++ E ++ D    WS           
Sbjct: 270 ANSSEIIVQQLNRRQNISKVIIANSGSGISKTIHEETETAWIDIKDRWSDEGPAGWDWIN 329

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSLIFSRKKDGDTG 415
            G+   +    G    I  +   G++  +  E+ ++ +     +  + + F    D  T 
Sbjct: 330 NGNKFIWVSEKGGWRQIYAIDLKGNERLITKENYDVISVKLIDNISKHIYFMASPDNATE 389

Query: 416 SKLYSIDLNGRNETLINTP 434
           S LY I L+G  +    +P
Sbjct: 390 SYLYRIALDGNTKAQRLSP 408


>gi|320107799|ref|YP_004183389.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
 gi|319926320|gb|ADV83395.1| WD40-like beta Propeller containing protein [Terriglobus saanensis
           SP1PR4]
          Length = 677

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 50/152 (32%), Gaps = 10/152 (6%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYS---VDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           P  S +G+             +     ++  +     LT        AS+  +  +  F 
Sbjct: 514 PMLSEDGQTLAFVRDNHGRGRLMVRRRLESSNTTEVALTPIQLNVYEASFLSE-KEYAFS 572

Query: 320 SDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           +  +G   Q+Y   +   +    +     +   P  SP G  +A++      + + +  +
Sbjct: 573 ATEDGHLPQIYWTDAAHVN----TPISLEASRYPALSPDGRWMAYSHLDHGVWNLWIRNR 628

Query: 379 DGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
                R + +   N   P W    ++L++   
Sbjct: 629 ASGAIRRVADVPCNQIQPAWESDSQTLLYGTD 660



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 4/98 (4%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++ A++  +D  + ++Y  D      P  +   R     P  S +G+    S       +
Sbjct: 567 KEYAFSATEDGHLPQIYWTDAAHVNTPISLEASRY----PALSPDGRWMAYSHLDHGVWN 622

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           ++  +  S A  R+ +     I  ++  DS  +++ +D
Sbjct: 623 LWIRNRASGAIRRVADVPCNQIQPAWESDSQTLLYGTD 660



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 85/275 (30%), Gaps = 24/275 (8%)

Query: 112 VTGRVIKEGKDRLRVE--------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD-- 161
           +T  VI   +  LRV+        +R+      +  +     S+    R  A T +    
Sbjct: 398 LTATVILSARSTLRVQRAERQEYAYRV--PLQAQGFLSSGPQSTADGIRYAAFTFTGYHL 455

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL---FEPR 218
           + ++      D +    +   S  SG     +      G+ I  L    + ++    EP 
Sbjct: 456 VMENQGKVSADSSIDAPYDDLSFTSGYGHVLVERASSSGSQIVDLNNPSEVVIEDAHEPM 515

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISVQ 277
            S + Q +A+   +      +           +  +   +  +    F S  K    S  
Sbjct: 516 LSEDGQTLAFVRDNHGRGRLMVRRRLESSNTTEVALTPIQLNVYEASFLSE-KEYAFSAT 574

Query: 278 KDEA-MDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +D     IY  D    N    L  + +     + SPD   + +     G   L++     
Sbjct: 575 EDGHLPQIYWTDAAHVNTPISLEASRY----PALSPDGRWMAYSHLDHGVWNLWIRNRAS 630

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
              +R++ D   +   P W      + +    G  
Sbjct: 631 GAIRRVA-DVPCNQIQPAWESDSQTLLYGTDCGRS 664



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 47/141 (33%), Gaps = 9/141 (6%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYV---MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S D   + F  D  G+ +L V   ++S+ + +  ++  +   Y     S      A
Sbjct: 513 EPMLSEDGQTLAFVRDNHGRGRLMVRRRLESSNTTEVALTPIQLNVYEASFLS--EKEYA 570

Query: 363 FTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           F+         I           + +E S    P  SP GR + +S    G     + + 
Sbjct: 571 FSATEDGHLPQIYWTDAAHVNTPISLEASRY--PALSPDGRWMAYSHLDHGVWNLWIRN- 627

Query: 422 DLNGRNETLINTPAYASDPQW 442
             +G    + + P     P W
Sbjct: 628 RASGAIRRVADVPCNQIQPAW 648



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 7/112 (6%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F S   +   +   G +         D A++   TP   +    P  SP+ + +AY+  D
Sbjct: 563 FLSEKEYAFSATEDGHLPQIYWT---DAAHVN--TPISLEASRYPALSPDGRWMAYSHLD 617

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
               +    +  R   A +R+ +     + P + S+ +  L       ++  
Sbjct: 618 HG--VWNLWIRNRASGAIRRVADVPCNQIQPAWESDSQTLLYGTDCGRSVWF 667


>gi|168702686|ref|ZP_02734963.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Gemmata obscuriglobus UQM 2246]
          Length = 696

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 58/161 (36%), Gaps = 15/161 (9%)

Query: 265 FSSNGKRALISVQKDEAM--DIYSVDLQSNATERLTN-------TLFINISASYSPDSSQ 315
           ++ + KR   +  +       + ++D +S     + N            +   Y  D+++
Sbjct: 244 WAPDSKRFYFTYNQRGHTVMRLLAIDAESGKVTAVVNEECKTFFDYANKLFVQYLDDTNE 303

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----TKFSGEKF 371
            V+ S+R+G   LY++       + I++ +           +   + F         + +
Sbjct: 304 AVWMSERDGWNHLYLIDLATGKARNITKGEWVVRGVERVDVKNREVWFRALGVHPDQDPY 363

Query: 372 AIG--VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            +    +K DG+    L +        +SP  + LI +  +
Sbjct: 364 HVHFCRIKLDGTGLVKLTDGDGTHTVEYSPDRKHLIDTYSR 404



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 85/243 (34%), Gaps = 39/243 (16%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI----------------GNFRSMI 260
           P ++P+ Q+  Y   + E +L   +  TR   A  ++                       
Sbjct: 47  PNWTPDGQQFWYQNANKEFVLVDMVKGTREVVAEDKLPKDAKPTPPPKKKRFDAADEGGD 106

Query: 261 LAPRF---------SSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISAS-- 308
              R          S +GK A       +  +++  D ++    +L T+    +   +  
Sbjct: 107 TFVRLAQPPRRGAESPDGKWATF----LKDSNVWLRDTKTKEETQLSTDGKPGDSYGTVF 162

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++PDS +++    + G ++   +  +    +   +    +Y  P     GD I  +K   
Sbjct: 163 WAPDSQKLIAIKTKAGGDRKVTLVESSPRDQLQPKTSTLNYLKP-----GDPIPLSK--P 215

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             F +   K+  + + L     +     W+P  +   F+  + G T  +L +ID      
Sbjct: 216 HLFDVAAKKEVATSDELFPNPWDTGFEHWAPDSKRFYFTYNQRGHTVMRLLAIDAESGKV 275

Query: 429 TLI 431
           T +
Sbjct: 276 TAV 278



 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 44/149 (29%), Gaps = 41/149 (27%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK------------------- 345
           ++ +++PD  Q  ++      ++  ++      ++ +++DK                   
Sbjct: 45  VAPNWTPDGQQFWYQ---NANKEFVLVDMVKGTREVVAEDKLPKDAKPTPPPKKKRFDAA 101

Query: 346 -EASYFDPVW---------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS----N 391
            E                 SP G    F K S     + +      +E  L  D     +
Sbjct: 102 DEGGDTFVRLAQPPRRGAESPDGKWATFLKDS----NVWLRDTKTKEETQLSTDGKPGDS 157

Query: 392 LQAPTWSPSGRS-LIFSRKKDGDTGSKLY 419
                W+P  +  +    K  GD    L 
Sbjct: 158 YGTVFWAPDSQKLIAIKTKAGGDRKVTLV 186


>gi|229188446|ref|ZP_04315493.1| Acylamino-acid-releasing enzyme [Bacillus cereus ATCC 10876]
 gi|228595000|gb|EEK52772.1| Acylamino-acid-releasing enzyme [Bacillus cereus ATCC 10876]
          Length = 654

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 92/282 (32%), Gaps = 43/282 (15%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             I +N + + ++D     Y   + D     P +SP+ + +AY +   +   ++++    
Sbjct: 43  DNIYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDARCIAYLSPVGDGGNQIFVKSLD 101

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQS-----NATERLTN 299
            D    +I + +  +   ++   GK      Q  E  +I    DL           +   
Sbjct: 102 -DYREVQITDEKEGVSTFKWGPTGKGLYYVTQSKECEEIKKRKDLYGDFQHIGKEHQNNC 160

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             +I I           V +SD +  E   V         +++  K+    +   S  G 
Sbjct: 161 LYYIEIE---------KVIQSDTDEHENRVVY--------QLTDGKDFHIHEFDISNDGK 203

Query: 360 LIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS----- 407
            + F               + ++     + + L V+     +  +SP G  + ++     
Sbjct: 204 KVVFMATPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPDGSKICYTASIRE 263

Query: 408 ----RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
               R    D+  ++Y ++  G     +        P QW  
Sbjct: 264 KDYYRNHIQDSTLEIYDMN-TGEVIQPLTNFDSTVMPLQWTA 304


>gi|153819806|ref|ZP_01972473.1| protein TolB [Vibrio cholerae NCTC 8457]
 gi|126509645|gb|EAZ72239.1| protein TolB [Vibrio cholerae NCTC 8457]
          Length = 63

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 3/65 (4%)

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQ 441
            ++L +    ++P+ +P+G  +I+S   +    + L  + ++GR +  L  T      P 
Sbjct: 1   MQILTKTLLDESPSIAPNGGMVIYSSIYN--KANVLSMVSIDGRFKARLPATNGRVRAPA 58

Query: 442 WVGFM 446
           W  F+
Sbjct: 59  WSPFL 63



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
            P  +P G ++ ++    +   + ++  DG  + RL   +  ++AP WSP
Sbjct: 12  SPSIAPNGGMVIYSSIYNKANVLSMVSIDGRFKARLPATNGRVRAPAWSP 61


>gi|261202788|ref|XP_002628608.1| WD domain-containing protein [Ajellomyces dermatitidis SLH14081]
 gi|239590705|gb|EEQ73286.1| WD domain-containing protein [Ajellomyces dermatitidis SLH14081]
          Length = 887

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 54/168 (32%), Gaps = 18/168 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  K+A           V + D        R+ +    +    +S +  +  IS  +
Sbjct: 572 FSRDGTKLATT----GRENIVIIYDVPTFSVIHRLTDHGGPVAYATWSPDDSKL-ISCSQ 626

Query: 279 DEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFES-DREGKEQLYVMQSNG 335
           D    ++  D+++     LT         SA+++P+    V  S DR+   QL      G
Sbjct: 627 DYKARLW--DVETGRCI-LTIDHHNEPVTSAAWAPNGDSFVTGSLDRQ--SQLCHWSVAG 681

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                     +    D   SP G  +           I V   +   E
Sbjct: 682 ESL--YKWSGQYRVRDCSISPDGRRLIAISTEK---KIYVYNFETRAE 724



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 13/165 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G +   + +++    +   D+ + +   RLT+       A++SPD S+++  S   
Sbjct: 572 FSRDGTKLATTGREN---IVIIYDVPTFSVIHRLTDHGGPVAYATWSPDDSKLISCSQ-- 626

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +  +                       W+P GD          +  +      G   
Sbjct: 627 -DYKARLWDVETGRCILTIDHHNEPVTSAAWAPNGDSFVTGSLD-RQSQLCHWSVAGESL 684

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                   ++  + SP GR LI    +      K+Y  +   R E
Sbjct: 685 YKWSGQYRVRDCSISPDGRRLIAISTEK-----KIYVYNFETRAE 724



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/217 (12%), Positives = 71/217 (32%), Gaps = 16/217 (7%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG--EKGDFNSRILFVSESVVSG 187
           L D   + QI    + ++  S    +    D     +    E  +    + ++  S    
Sbjct: 518 LLDYVKQNQINQCLYHNTAESPSLYSDHQCDRSQFPLRTSLELSEHTDEVWYLEFSRDGT 577

Query: 188 I-----IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
                  +N + + D    ++ +        +    +SP+  K+   + D +      L 
Sbjct: 578 KLATTGRENIVIIYDVPTFSVIHRLTDHGGPVAYATWSPDDSKLISCSQDYK----ARLW 633

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D    R    I +    + +  ++ NG    ++   D    +    +   +  +  +  +
Sbjct: 634 DVETGRCILTIDHHNEPVTSAAWAPNGDS-FVTGSLDRQSQLCHWSVAGESLYKW-SGQY 691

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                S SPD  +++  S     +++YV       ++
Sbjct: 692 RVRDCSISPDGRRLIAISTE---KKIYVYNFETRAEE 725


>gi|206580055|ref|YP_002236718.1| oligogalacturonate lyase [Klebsiella pneumoniae 342]
 gi|206569113|gb|ACI10889.1| oligogalacturonate lyase [Klebsiella pneumoniae 342]
          Length = 391

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 86/250 (34%), Gaps = 27/250 (10%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F  +   + +A   D      YL++     A +              S + K 
Sbjct: 36  NYFYQKCFFNDGSHLLFAGEFDGH-WNYYLLNIASAEAIQLTEGAGDNTFGGFLSPDDKS 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTL----------------FINISAS-YSPDSS 314
                     +++    L      R+++                   I I+ S ++P + 
Sbjct: 95  LYYVKNDRTLLEVNLTTLVEREVYRVSDDWVGYGTWVANSDCSKLVGIEIAKSDWTPLND 154

Query: 315 QIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF- 371
             +F           +++ +  S + ++  +++     P++ P     IAF         
Sbjct: 155 WQIFHDFFHKGPHCRLLRVDLHSGESQVIHEEKIWLGHPIYRPFDDHTIAFCHEGPHDLV 214

Query: 372 --AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSID-LNG 425
              + ++ +DGS  R +   +  ++ T   W P G +LI+     G  G  +Y  D  +G
Sbjct: 215 DARMWLVNEDGSHVRKVKTHAPGESCTHEFWVPDGSALIYVSYLKGQQGRTIYRFDPESG 274

Query: 426 RNETLINTPA 435
            NE L+  PA
Sbjct: 275 VNEALMTMPA 284



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 65/190 (34%), Gaps = 38/190 (20%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG+++R + T +  +      + P+   + Y +
Sbjct: 197 PFDDHTIAFCHEGPHDLVDARMWLVNEDGSHVRKVKTHAPGESCTHEFWVPDGSALIYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---------------I 274
           Y      R +Y  D         +       L   F  +G   +                
Sbjct: 257 YLKGQQGRTIYRFDPESGVNEALMTMPACSHLMSNF--DGTLLVGDGSGTPVDVKDTGGY 314

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFES 320
           S+  D    +Y  ++      R+      + S               S++PD S I+F S
Sbjct: 315 SIDND--PYLYVFNVAQKRYFRVARH---DTSWATVANSRQVTHPHPSFTPDDSAILFSS 369

Query: 321 DREGKEQLYV 330
           D++GK  +Y+
Sbjct: 370 DKDGKPAIYI 379



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 70/235 (29%), Gaps = 39/235 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           ++P      +  +  +      L         + I   +  +  P +   +        +
Sbjct: 149 WTPLNDWQIFHDFFHKGPHCRLLRVDLHSGESQVIHEEKIWLGHPIYRPFDDHTIAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ V+   +   ++ T+    +     + PD S +++ S  +G++   +Y 
Sbjct: 209 GPHDLVDARMWLVNEDGSHVRKVKTHAPGESCTHEFWVPDGSALIYVSYLKGQQGRTIYR 268

Query: 331 MQSNGS------------------DQKRISQDKEASYFD----PVWSPQGDLIAFTKFSG 368
                                   D   +  D   +  D      +S   D   +     
Sbjct: 269 FDPESGVNEALMTMPACSHLMSNFDGTLLVGDGSGTPVDVKDTGGYSIDNDPYLYVFNVA 328

Query: 369 EKFAIGVMKKDGS-----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +K    V + D S       R +        P+++P   +++FS  KDG     +
Sbjct: 329 QKRYFRVARHDTSWATVANSRQVTHP----HPSFTPDDSAILFSSDKDGKPAIYI 379



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 37/109 (33%), Gaps = 6/109 (5%)

Query: 288 DLQSNAT-ERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           D  + A   RLT               +  D S ++F  + +G    Y++    ++  ++
Sbjct: 16  DPDTGAEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHWNYYLLNIASAEAIQL 75

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++    + F    SP    + + K       + +      +   + +D 
Sbjct: 76  TEGAGDNTFGGFLSPDDKSLYYVKNDRTLLEVNLTTLVEREVYRVSDDW 124


>gi|73966919|ref|XP_853945.1| PREDICTED: similar to WD SOCS-box protein 1 isoform 1 isoform 2
           [Canis familiaris]
          Length = 421

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC---SVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 268 GALLATASYDT---RVYIWDPHNGD--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 322

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 323 GLHVA---SLADDKMVRFWRIDED 343



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 80/259 (30%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++           R +  T + D               ++ VS S   
Sbjct: 151 RIKIWDVYTGKLLL--NLVDHTEVVRDL--TFAPD-------------GSLILVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L +   
Sbjct: 194 TL---RVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSMLCSV----GASKAVFLWNMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + I+  D  +               
Sbjct: 246 YTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFPPPT 302

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   +   +D +   + + +  +     +++          
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 357

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 358 AFSTDGSVLAAGTHDGSVY 376



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L +   +    +++PD S I+  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K + +  +   +   +SP   ++     S   F +  M K     +L     
Sbjct: 200 LKDDGNMMKVL-RGHQNWVYSCAFSPDSSMLCSVGASKAVF-LWNMDKYTMIRKLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 258 DVVACDFSPDGALLATASY 276


>gi|6563198|gb|AAF17193.1|AF112205_1 WSB-1 protein [Homo sapiens]
 gi|5817190|emb|CAB53693.1| hypothetical protein [Homo sapiens]
          Length = 421

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC---SVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 268 GALLATASYDT---RVYIWDPHNGD--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 322

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 323 GLHVA---SLADDKMVRFWRIDED 343



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 80/259 (30%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++           R +  T + D               ++ VS S   
Sbjct: 151 RIKIWDVYTGKLLL--NLVDHTEVVRDL--TFAPD-------------GSLILVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L +   
Sbjct: 194 TL---RVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSMLCSV----GASKAVFLWNMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + I+  D  +               
Sbjct: 246 YTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFPPPT 302

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   +   +D +   + + +  +     +++          
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 357

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 358 AFSTDGSVLAAGTHDGSVY 376



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L +   +    +++PD S I+  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K + +  +   +   +SP   ++     S   F +  M K     +L     
Sbjct: 200 LKDDGNMMKVL-RGHQNWVYSCAFSPDSSMLCSVGASKAVF-LWNMDKYTMIRKLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 258 DVVACDFSPDGALLATASY 276


>gi|22760676|dbj|BAC11291.1| unnamed protein product [Homo sapiens]
          Length = 421

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC---SVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 268 GALLATASYDT---RVYIWDPHNGD--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 322

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 323 GLHVA---SLADDKMVRFWRIDED 343



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 80/259 (30%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++           R +  T + D               ++ VS S   
Sbjct: 151 RIKIWDVYTGKLLL--NLVDHTEVVRDL--TFAPD-------------GSLILVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L +   
Sbjct: 194 TL---RVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSMLCSV----GASKAVFLWNMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + I+  D  +               
Sbjct: 246 YTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFPPPT 302

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   +   +D +   + + +  +     +++          
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 357

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 358 AFSTDGSVLAAGTHDGSVY 376



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L +   +    +++PD S I+  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K + +  +   +   +SP   ++     S   F +  M K     +L     
Sbjct: 200 LKDDGNMMKVL-RGHQNWVYSCAFSPDSSMLCSVGASKAVF-LWNMDKYTMIRKLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 258 DVVACDFSPDGALLATASY 276


>gi|289743251|gb|ADD20373.1| WD40 repeat-containing protein [Glossina morsitans morsitans]
          Length = 351

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 82/224 (36%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 52  YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 107

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + ++ +       + L          +++P S+ IV  S
Sbjct: 108 SDVAWSSD-SRLLVSGSDDKTLKVWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 165

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 166 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 220

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 221 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 261


>gi|238757815|ref|ZP_04618998.1| Oligogalacturonide lyase [Yersinia aldovae ATCC 35236]
 gi|238704058|gb|EEP96592.1| Oligogalacturonide lyase [Yersinia aldovae ATCC 35236]
          Length = 388

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 31/190 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
           +S + F        ++   + +++ DG+N+R + T +  +      + P+   + Y +Y 
Sbjct: 200 DSTVAFC-HEGPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYL 258

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR------SMILAPRFSSNGKRALISVQKDEAMDI-- 284
                R       +    +++ +        S         +G  A + VQ D    I  
Sbjct: 259 KGSPERFIYSADPVTLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEN 318

Query: 285 ----YSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFESDREGKE 326
               Y  ++++    R+      + S               S++PD  Q++F SD  GK 
Sbjct: 319 DPFLYVFNMKNGTQHRVARH---DTSWQVFEGDRQVTHPHPSFTPDDKQVLFTSDVHGKP 375

Query: 327 QLYVMQSNGS 336
            LY+     S
Sbjct: 376 ALYLATLPES 385



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/275 (11%), Positives = 83/275 (30%), Gaps = 41/275 (14%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V   V    +     V + D   +  +   R+       + P      +  +   +    
Sbjct: 116 VVYQVPDAWVGYGTWVANSDCTKLVGIEIKRED------WEPLTDWKKFHAFYFTNPCCR 169

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MDIYSVDLQSNATE 295
            +           I      +  P +   +        +         ++ ++   +   
Sbjct: 170 LMRVDLKTGESAVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGSNMR 229

Query: 296 RL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFD 351
           ++ T+    +     + PD S +V+ S  +G  +  +Y       + ++++     S+  
Sbjct: 230 KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPERFIYSADPVTLENRQLTSMPACSHLM 289

Query: 352 PVWSPQGDLIA-------FTKFSGEKFAI------GVMKK-DGSQERLLVEDSNLQ---- 393
             +   G L+                + I       V    +G+Q R+   D++ Q    
Sbjct: 290 SNY--DGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWQVFEG 347

Query: 394 -------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   P+++P  + ++F+    G     L ++
Sbjct: 348 DRQVTHPHPSFTPDDKQVLFTSDVHGKPALYLATL 382



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 76/243 (31%), Gaps = 31/243 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
               +++    +  +D      +       P  +   R+      F+ +G + L     D
Sbjct: 1   MAKGKQIPLTFHTYQDASTGVQVTRLT---PPEVTCHRNYFYQKCFTRDGSKLLFGGAFD 57

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + Y +DL +    +LT     N    + SP    + +  D      L  +     ++
Sbjct: 58  GPWNYYLLDLTTQVATQLTEGHGDNTFGGFLSPQDDALFYVKD---GRNLMRVDLATLEE 114

Query: 339 KRISQDKEASYFDPVWSPQG-------------------DLIAFTKFSGEKFAIGVMKKD 379
             + Q  +A      W                       D   F  F        +M+ D
Sbjct: 115 SVVYQVPDAWVGYGTWVANSDCTKLVGIEIKREDWEPLTDWKKFHAFYFTNPCCRLMRVD 174

Query: 380 ---GSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLINTP 434
              G    +L E+  L  P + P    ++ F  +   D   ++++ I+ +G N   + T 
Sbjct: 175 LKTGESAVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGSNMRKVKTH 234

Query: 435 AYA 437
           A  
Sbjct: 235 AEG 237



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 79/254 (31%), Gaps = 35/254 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F+ +  K+ +     +     YL+D     A +              S     
Sbjct: 36  NYFYQKCFTRDGSKLLFGG-AFDGPWNYYLLDLTTQVATQLTEGHGDNTFGGFLSPQDDA 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASY--SPDSSQIV----------- 317
                 KD   ++  VDL +     +           ++  + D +++V           
Sbjct: 95  LFYV--KDGR-NLMRVDLATLEESVVYQVPDAWVGYGTWVANSDCTKLVGIEIKREDWEP 151

Query: 318 ------FESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
                 F +        +L  +     +   I Q+ +     P++ P     +AF     
Sbjct: 152 LTDWKKFHAFYFTNPCCRLMRVDLKTGESAVILQENQW-LGHPIYRPYDDSTVAFCHEGP 210

Query: 369 EKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  + ++ +DGS  R +    E  +     W P G +L++     G     +YS D
Sbjct: 211 HDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPERFIYSAD 270

Query: 423 -LNGRNETLINTPA 435
            +   N  L + PA
Sbjct: 271 PVTLENRQLTSMPA 284


>gi|188575065|ref|YP_001911994.1| dipeptidyl peptidase IV [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188519517|gb|ACD57462.1| dipeptidyl peptidase IV [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 770

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 102/354 (28%), Gaps = 80/354 (22%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD----------RDG-ANI 203
           A      +Y     E G     +L   +   + I   +L V D          RDG  N 
Sbjct: 137 ARARCSKLYAKDKPEPG-----VLSPDKRSEAFIRDWNLWVRDLASGQETQLTRDGVENF 191

Query: 204 RYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-------- 252
            Y T +      +     +SP+  K+A    D      +YL+ T++     +        
Sbjct: 192 GYATDNAGWQHTDNAIVAWSPDSSKIATFQQDQRKTGDMYLVSTKLGHPELQSWKYPLAG 251

Query: 253 ------------------------------------IGNFRSMILAPRFSSNGKRALI-- 274
                                               +     +    +++ + K      
Sbjct: 252 DKDVTMIERVIIDVPTRSVLRLKTPADQHRSTLCDDVSCSPGLWDDVKWAPDSKTLAFAS 311

Query: 275 SVQKDEAMDIYSVDLQSNATE------RLTNTLFINISASYS--PDSSQIVFESDREGKE 326
           + +  +   +   D  + A          T      ++A+++  P S++ V+ S+R    
Sbjct: 312 TSRFHKQTWLRIADASTGAVRTAFDETVKTYYESGQVAANWAYLPASNEAVWFSERSDWG 371

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKD 379
           QLY+        KR     E +  + +        A+    G           +  +  D
Sbjct: 372 QLYLYDLATGKPKRAITTGEGNVTELLRVDPVTRTAWFVGVGRSAGVDPYYQQLWKVSLD 431

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G +  LL  +    +   SP G   + S          L     +GR  + I T
Sbjct: 432 GGEPVLLTPEPANHSIALSPDGARFVDSYSTSVTPPVTLLRDAGDGRTVSTIAT 485


>gi|268316559|ref|YP_003290278.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Rhodothermus marinus DSM 4252]
 gi|262334093|gb|ACY47890.1| peptidase S9B dipeptidylpeptidase IV domain protein [Rhodothermus
           marinus DSM 4252]
          Length = 771

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 52/164 (31%), Gaps = 39/164 (23%)

Query: 278 KDEAMDIYSVDLQSNATERLTNTL---FINISA-------SYSPDSSQIVF--ESDREGK 325
           +  A  +   +L++   ERL +       ++          YS D  +++   +S+R  +
Sbjct: 69  QTGATHLIRYNLETGRRERLIDGNRLYAHDVGRLIRIEDYQYSRDGRRVLLYTDSERVWR 128

Query: 326 EQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                  YV        + +S   +        SP G   AF +       + ++  +  
Sbjct: 129 YNTKGFYYVYDLEADSLRPVSDRSKGYQMFAKLSPDGRQAAFVRDR----NLYLVDLESG 184

Query: 382 QERLLVEDSNLQA-------------------PTWSPSGRSLIF 406
           QE  L  D    +                     WSP GR + F
Sbjct: 185 QEVPLTTDGAPDSIINGTFDWVYEEEFGLRDGWAWSPDGRYIAF 228



 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 49/136 (36%), Gaps = 28/136 (20%)

Query: 265 FSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIV 317
           +S +G+R L+        + +     Y  DL++++   +++ +    + A  SPD  Q  
Sbjct: 110 YSRDGRRVLLYTDSERVWRYNTKGFYYVYDLEADSLRPVSDRSKGYQMFAKLSPDGRQAA 169

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDK-----------------EASYFDPVWSPQGDL 360
           F  DR     LY++      +  ++ D                          WSP G  
Sbjct: 170 FVRDR----NLYLVDLESGQEVPLTTDGAPDSIINGTFDWVYEEEFGLRDGWAWSPDGRY 225

Query: 361 IAFTKFSGEKFAIGVM 376
           IAF K    K  +  M
Sbjct: 226 IAFFKLDESKVPLFTM 241



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/360 (13%), Positives = 99/360 (27%), Gaps = 75/360 (20%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           R  AH +   I         D    +L+  SE V     K    V D +  ++R ++   
Sbjct: 93  RLYAHDVGRLIRIEDYQYSRDGRRVLLYTDSERVWRYNTKGFYYVYDLEADSLRPVSDRS 152

Query: 211 DQILFEPRFSPNQQKVAYATYDDE---DILRVYLMDTRIDRAPKRIGNFR---------S 258
                  + SP+ ++ A+    +    D+     +    D AP  I N            
Sbjct: 153 KGYQMFAKLSPDGRQAAFVRDRNLYLVDLESGQEVPLTTDGAPDSIINGTFDWVYEEEFG 212

Query: 259 MILAPRFSSNGKRALI------------------------------SVQKDEAMDIYSVD 288
           +     +S +G+                                  + + +  + I  +D
Sbjct: 213 LRDGWAWSPDGRYIAFFKLDESKVPLFTMVDLREHYPKPISFRYPKAGEPNSEIQIGVID 272

Query: 289 LQSNATERLTNTLFINISAS--------YSP--DSSQIV--FESDREGKE-QLYVMQSNG 335
           LQ+          +              ++P  D    V  F  +R+    +L       
Sbjct: 273 LQTGQVRFFDTDTWYEGGDRYEYLARMGWTPPIDGRHYVWMFRMNRDQNHLELLYGDPAT 332

Query: 336 SDQKRISQDKEASY------------FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              + + ++  +++                +        +         + + + DG+  
Sbjct: 333 MSLRTVLEEHASAWLEVETGFTDLEAGQITYLQDNRHFVWISERDGYRHLYLYRNDGTLV 392

Query: 384 RLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R L +              G  + F+   DG     LY + L+        +   A  PQ
Sbjct: 393 RQLTQGPWDVTDFHGVDEQGGWVYFTATIDGPRERHLYRVPLHPE-----ASNGQAPAPQ 447



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 34/130 (26%), Gaps = 23/130 (17%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFD---------PVWSPQGDLIAFTKFSGEKFAI 373
            G   L         ++R+         D           +S  G  +     S   +  
Sbjct: 70  TGATHLIRYNLETGRRERLIDGNRLYAHDVGRLIRIEDYQYSRDGRRVLLYTDSERVWRY 129

Query: 374 ------GVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                  V   +    R + +           SP GR   F R ++      LY +DL  
Sbjct: 130 NTKGFYYVYDLEADSLRPVSDRSKGYQMFAKLSPDGRQAAFVRDRN------LYLVDLES 183

Query: 426 RNETLINTPA 435
             E  + T  
Sbjct: 184 GQEVPLTTDG 193


>gi|145517792|ref|XP_001444776.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124412204|emb|CAK77379.1| unnamed protein product [Paramecium tetraurelia]
          Length = 590

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 73/224 (32%), Gaps = 21/224 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G   NS  + D      +    + + I+++  FSP+     Y      D   + L DT+
Sbjct: 16  AGSAYNSFYLWDVKTGKQQTKLNNHNNIVYQVCFSPDG----YILATGCDDKSIQLWDTK 71

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +         S + +  F  +G   +    K     I   D++S       ++    I
Sbjct: 72  TGQQNINFFGHSSHVESVSFFPDGSTLI---SKSFDNSICLWDVKSGKLTAKFDSQSTGI 128

Query: 306 SA-SYSPDSSQIVFESDREG--KEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLI 361
           +  + SPD +         G     +Y+       QK ++    +       +S  G L 
Sbjct: 129 TPQTLSPDGTTYA-----SGIKDNYIYLWDVKTGQQKTKLKSQHQGVPLVCFFS-NGTL- 181

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 G+   I +      + +   +   + +   SP G +  
Sbjct: 182 ---ASIGKNCFIHLWDIKTRKLKNKFKIQTVNSYCVSPDGNTFA 222



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 62/178 (34%), Gaps = 14/178 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+   +A  +  +      YL D +  +   ++ N  +++    FS +G   L +   
Sbjct: 7   FSPDGTMLAAGSAYN----SFYLWDVKTGKQQTKLNNHNNIVYQVCFSPDG-YILATGCD 61

Query: 279 DEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D+++ ++  D ++               S S+ PD S ++ +S       + +       
Sbjct: 62  DKSIQLW--DTKTGQQNINFFGHSSHVESVSFFPDGSTLISKSF---DNSICLWDVKSGK 116

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                  +         SP G    +     + + I +      Q++  ++  +   P
Sbjct: 117 LTAKFDSQSTGITPQTLSPDGT--TYASGIKDNY-IYLWDVKTGQQKTKLKSQHQGVP 171



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 56/177 (31%), Gaps = 18/177 (10%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIV 317
           M L+  FS +G         +     Y  D+++     +L N   I     +SPD   + 
Sbjct: 1   MFLSVCFSPDGTMLAAGSAYN---SFYLWDVKTGKQQTKLNNHNNIVYQVCFSPDGYILA 57

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              D    + + +  +    Q        +      + P G  +    F      I +  
Sbjct: 58  TGCD---DKSIQLWDTKTGQQNINFFGHSSHVESVSFFPDGSTLISKSFDNS---ICLWD 111

Query: 378 KDGSQERLLVED-SNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431
               +     +  S    P T SP G     +    G   + +Y  D+  G+ +T +
Sbjct: 112 VKSGKLTAKFDSQSTGITPQTLSPDG-----TTYASGIKDNYIYLWDVKTGQQKTKL 163



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 45/300 (15%), Positives = 101/300 (33%), Gaps = 57/300 (19%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            F LWDVK  KQ             +   H   + +YQ      G       ++  +   
Sbjct: 22  SFYLWDVKTGKQ-----------QTKLNNHN--NIVYQVCFSPDG-------YILATGCD 61

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                 L        NI +   S         F P+   +   ++D+     + L D + 
Sbjct: 62  DK-SIQLWDTKTGQQNINFFGHSSHVESV--SFFPDGSTLISKSFDN----SICLWDVKS 114

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERL-TNTLFIN 304
            +   +  +  + I     S +G     S  KD  + ++  D+++     +L +    + 
Sbjct: 115 GKLTAKFDSQSTGITPQTLSPDGTTYA-SGIKDNYIYLW--DVKTGQQKTKLKSQHQGVP 171

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-- 362
           +   +S  +  +         +  ++   +   +K  ++ K  +      SP G+  A  
Sbjct: 172 LVCFFS--NGTLA-----SIGKNCFIHLWDIKTRKLKNKFKIQTVNSYCVSPDGNTFAQT 224

Query: 363 -FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRS--LIFSRKKDGDTGSK 417
            +    G ++           E+L+++D N++  +  +S  G    + + R+     G +
Sbjct: 225 DYCNVKGSRY-----------EKLIIKDYNIRFLSFCFSKDGNIFNIWYLRQLHSIMGYQ 273


>gi|120436552|ref|YP_862238.1| secreted prolyl oligopeptidase family protein [Gramella forsetii
           KT0803]
 gi|117578702|emb|CAL67171.1| secreted prolyl oligopeptidase family protein [Gramella forsetii
           KT0803]
          Length = 634

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 86/184 (46%), Gaps = 8/184 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDR 322
            FS+N  + LIS  +    ++Y +++   + + +T +   ++ A  Y P+SS I++ +D+
Sbjct: 41  SFSANESKLLISNDESGIFNLYEINISDGSQKAITTSDQESLFAVDYVPNSSDILYSADK 100

Query: 323 EGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKK 378
            G E   LY+++ +G+  K ++  +        WS     + +       + F +  M+ 
Sbjct: 101 GGNEISHLYLLKPDGT-SKELTTGENEKVNFAGWSTDKSTMYYLSNKRDPQFFDLYKMEI 159

Query: 379 DGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              +  +L E++   + +  S SG+ LI S+     + +KL+ ++      T I+ P + 
Sbjct: 160 GKWEPNMLYENNEGYSVSEVSSSGKFLILSKPIT-TSENKLFLLNRESEEMTEISKPGFN 218

Query: 438 SDPQ 441
             P 
Sbjct: 219 YSPT 222



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/282 (15%), Positives = 105/282 (37%), Gaps = 32/282 (11%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
             Y++     G F++    +  S     I N   +   DG+  + +T S  + LF   + 
Sbjct: 30  QFYENTRIGGGSFSANESKLLISNDESGIFNLYEINISDGS-QKAITTSDQESLFAVDYV 88

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQK 278
           PN   + Y + D       +L   + D   K +    +  +  A  +S++         K
Sbjct: 89  PNSSDILY-SADKGGNEISHLYLLKPDGTSKELTTGENEKVNFA-GWSTDKSTMYYLSNK 146

Query: 279 DE--AMDIYSVDLQSNATERL-TNTLFINISASYSPDSS-----QIVFESDREGKEQLYV 330
            +    D+Y +++       L  N    ++S   S         + +  S+     +L++
Sbjct: 147 RDPQFFDLYKMEIGKWEPNMLYENNEGYSVS-EVSSSGKFLILSKPITTSE----NKLFL 201

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVED 389
           +     +   IS+    +Y    +S     + +T   G +F  +     D  + ++L E 
Sbjct: 202 LNRESEEMTEISKPGF-NYSPTGFSKDETELYYTTNHGGEFSRLMSFNLDTKESQVLYET 260

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +             +++S   + DT  ++ +++ +G N+ ++
Sbjct: 261 NWD-----------VMYSNLSENDT-YRVIALNEDGANKLIL 290



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDS-NLQAPTWSPS 400
             +        +S     +  +      F +  +   DGSQ+ +   D  +L A  + P+
Sbjct: 31  FYENTRIGGGSFSANESKLLISNDESGIFNLYEINISDGSQKAITTSDQESLFAVDYVPN 90

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              +++S  K G+  S LY +  +G ++ L   
Sbjct: 91  SSDILYSADKGGNEISHLYLLKPDGTSKELTTG 123


>gi|325518076|gb|EGC97874.1| putative periplasmic component of the Tol biopolymer transport
           system [Burkholderia sp. TJI49]
          Length = 470

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 70/213 (32%), Gaps = 14/213 (6%)

Query: 225 KVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDE 280
           K+ Y +Y    D      +         ++      I  P    FS +GK       ++ 
Sbjct: 46  KLVYHSYVKYGDGTSQLFLYDFSAHTLTQLSKSTWGITDPMNGVFSPDGKWLAFMGIRNG 105

Query: 281 AMDIYSVDL-QSNATERLTNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           A +++ + L        +TN+     N    +SPD   +VF+ + + K+      S G  
Sbjct: 106 AWNVFMLQLGAGTPPVNMTNSTGATRNEDPKFSPDGKTLVFKQNGDVKQGTLSYTSAGPV 165

Query: 338 QKRISQDKEAS----YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
              I     A     Y  P  +P    + +   +G    +                + LQ
Sbjct: 166 FTSIVSLTNAPSGAEYSMPYLAPDASAVYYATGTGANMGLMKRTIATGATATFDHPAGLQ 225

Query: 394 --APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              P     G  + ++R KD     ++Y+   +
Sbjct: 226 TYYPIVRADG-MVFYARWKDSGGLDQIYAKSAD 257



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 72/227 (31%), Gaps = 12/227 (5%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI-LFEPRFSPNQQKVAY- 228
           G F+    +++   +     N   +    G     +T S       +P+FSP+ + + + 
Sbjct: 88  GVFSPDGKWLAFMGIRNGAWNVFMLQLGAGTPPVNMTNSTGATRNEDPKFSPDGKTLVFK 147

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQKDEAMDIYS 286
              D +     Y     +  +   + N  S      P  + +      +      M +  
Sbjct: 148 QNGDVKQGTLSYTSAGPVFTSIVSLTNAPSGAEYSMPYLAPDASAVYYATGTGANMGLMK 207

Query: 287 VDLQSNATERLTNTLFINI-SASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRIS 342
             + + AT    +   +         D   +VF +   D  G +Q+Y   ++ +      
Sbjct: 208 RTIATGATATFDHPAGLQTYYPIVRADG--MVFYARWKDSGGLDQIYAKSADPAATPNAL 265

Query: 343 QDKEASYFDPVWSP-QG-DLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
              +    +   +P  G + + F+  +   + + V      Q   L 
Sbjct: 266 PLNDCVSNNSDPAPVNGTNYLFFSSTTAGGYQLYVGDVTTGQRWSLT 312


>gi|122879316|ref|YP_202682.6| dipeptidyl peptidase IV [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 770

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 102/354 (28%), Gaps = 80/354 (22%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD----------RDG-ANI 203
           A      +Y     E G     +L   +   + I   +L V D          RDG  N 
Sbjct: 137 ARARCSKLYAKDKPEPG-----VLSPDKRSEAFIRDWNLWVRDLASGQETQLTRDGVENF 191

Query: 204 RYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-------- 252
            Y T +      +     +SP+  K+A    D      +YL+ T++     +        
Sbjct: 192 GYATDNAGWQHTDNAIVAWSPDSSKIATFQQDQRKTGDMYLVSTKLGHPELQSWKYPLAG 251

Query: 253 ------------------------------------IGNFRSMILAPRFSSNGKRALI-- 274
                                               +     +    +++ + K      
Sbjct: 252 DKDVTMIERVIIDVPTRSVLRLKTAPDQHRSTLCDDVSCSPGLWDDVKWAPDSKTLAFAS 311

Query: 275 SVQKDEAMDIYSVDLQSNATE------RLTNTLFINISASYS--PDSSQIVFESDREGKE 326
           + +  +   +   D  + A          T      ++A+++  P S++ V+ S+R    
Sbjct: 312 TSRFHKQTWLRIADASTGAVRTAFDETVKTYYESGQVAANWAYLPASNEAVWFSERSDWG 371

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKD 379
           QLY+        KR     E +  + +        A+    G           +  +  D
Sbjct: 372 QLYLYDLATGKPKRAITTGEGNVTELLRVDPVTRTAWFVGVGRSAGVDPYYQQLWKVSLD 431

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G +  LL  +    +   SP G   + S          L     +GR  + I T
Sbjct: 432 GGEPVLLTPEPANHSIALSPDGARFVDSYSTSVTPPVTLLRDAGDGRTVSTIAT 485


>gi|219848254|ref|YP_002462687.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Chloroflexus aggregans DSM 9485]
 gi|219542513|gb|ACL24251.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Chloroflexus aggregans DSM 9485]
          Length = 629

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 82/247 (33%), Gaps = 34/247 (13%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +   G N+R L        +      +Q ++ +  + D+ + R +        AP  +G 
Sbjct: 63  VTPTGMNVRTLVHEYGGRSYVV----DQGEIFFVEFSDQTLYRQH-----PGAAPVPLGT 113

Query: 256 FRSMILA-PRFSSNGKRALIS-----VQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              +  A P       R +          +    + ++ L       L N      +   
Sbjct: 114 PPGLRFAEPIVDRRRNRLIAVGEDHRSSGEPLNTLVAISLADGTVTPLLNGRDFVAAPRL 173

Query: 310 SPDSSQIVF-ESDREGKE----QLYVMQS--NG--SDQKRISQDKEASYFDPVWSPQGDL 360
           SP+ + + +   D         +L+V     +G     +R++     S F P W+P G L
Sbjct: 174 SPNGAWLAWLAWDHPNMPWDAAELWVAPVLTDGSLGAARRLAGGPGDSCFQPEWTPDGAL 233

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW---------SPSGRSLIFSRKKD 411
           +   + +G  + +  +  DG+   L   D+    P W          P GR +    ++ 
Sbjct: 234 LVVAERTG-WWNLYRLDLDGNTTPLYPLDAEFGQPLWQLGMRTYVPLPDGRIVATFSRES 292

Query: 412 GDTGSKL 418
                 +
Sbjct: 293 RRHMCVI 299



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 16/135 (11%)

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AI 373
            S       + +  ++G+    +  +       P  SP G  +A+  +           +
Sbjct: 140 SSGEPLNTLVAISLADGTVTPLL--NGRDFVAAPRLSPNGAWLAWLAWDHPNMPWDAAEL 197

Query: 374 GV--MKKDG--SQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            V  +  DG     R L          P W+P G  L+ + +        LY +DL+G  
Sbjct: 198 WVAPVLTDGSLGAARRLAGGPGDSCFQPEWTPDGALLVVAERTG---WWNLYRLDLDGNT 254

Query: 428 ETLINTPAYASDPQW 442
             L    A    P W
Sbjct: 255 TPLYPLDAEFGQPLW 269


>gi|124266410|ref|YP_001020414.1| hypothetical protein Mpe_A1217 [Methylibium petroleiphilum PM1]
 gi|124259185|gb|ABM94179.1| hypothetical protein Mpe_A1217 [Methylibium petroleiphilum PM1]
          Length = 997

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 48/186 (25%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------KDEAMDIYSVDL--- 289
                +    +     P  S +GK+ + +++                   +I+  D+   
Sbjct: 83  HNITTQFTQGQGDASDPEVSYDGKKIVFAMRCPTTNTAQIDGGPACTGRWNIWEYDMTTG 142

Query: 290 --QSNATERLT-NTLFINISASYSPDSSQIVFESDREGKE-------------------- 326
                +  RLT +T   ++  +Y P     VF S+R+ K                     
Sbjct: 143 GYTGGSFRRLTSSTQDDDVDPAYLPADRGFVFSSNRQTKSKTTQALGQTYYALDEYERER 202

Query: 327 --QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKKDG 380
              L+ M +NG + ++IS ++     +PV  P GD I F+++       +FAI   K DG
Sbjct: 203 VFNLHTMTANGVNIQQISFNQSH-DRNPVVRPNGD-ILFSRWEHVGDRNRFAIFRTKPDG 260

Query: 381 SQERLL 386
           +   +L
Sbjct: 261 TDMFVL 266


>gi|297565562|ref|YP_003684534.1| WD40 repeat, subgroup [Meiothermus silvanus DSM 9946]
 gi|296850011|gb|ADH63026.1| WD40 repeat, subgroup [Meiothermus silvanus DSM 9946]
          Length = 608

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/237 (18%), Positives = 85/237 (35%), Gaps = 18/237 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S      + V +  G  +R L+P    +     FSP+   +        D  R +  +T 
Sbjct: 246 SAGQDEKIVVWNARGQKLRGLSPGATALAL--AFSPDGHTL----LSGGDDGRAWRWNTA 299

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             RA   +  F + + A  +S +G R L S   D+ + ++  D Q       +  +    
Sbjct: 300 TGRAEGVLEPFAASVFALAYSPDG-RILASGGADKTVRLW--DGQGRLLRTFSGPMLALT 356

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + ++SPD   +   S       +++ ++      R     +   +   + P   L     
Sbjct: 357 TLAFSPDGKILAGGSQDGW---IWLWEAASGKLLRQLGPHDNGAWALAFHP--TLPLLVS 411

Query: 366 FSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             G++         G   R     +S + A ++SP G++L        D   +L+S 
Sbjct: 412 GGGDELLKFWNPNTGRLLRDFRAHESTVLAASFSPDGQTLA---SAGADGTIRLWST 465



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 98/280 (35%), Gaps = 43/280 (15%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D  G  +R  +      L    FSP+ + +A  + D      ++L +  
Sbjct: 328 SGGADKTVRLWDGQGRLLRTFS-GPMLALTTLAFSPDGKILAGGSQDG----WIWLWEAA 382

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  +++G   +   A  F       L+S   DE +  ++ +                +
Sbjct: 383 SGKLLRQLGPHDNGAWALAFHPT-LPLLVSGGGDELLKFWNPN-TGRLLRDFRAHESTVL 440

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR---------------ISQDKEASYF 350
           +AS+SPD   +       G +    + S G    R               +      + +
Sbjct: 441 AASFSPDGQTLA----SAGADGTIRLWSTGGQPLRSLPPPRPGYVGQGDIVEPSHAGAVY 496

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLL-VEDSNLQAPTWSPSGRSLIFSR 408
              +SP G ++A          + +     G + R+L    + +Q   +SP G+SL+ + 
Sbjct: 497 ALAYSPDGRMLASASHDNT---LKLWDLRTGQELRVLRAHTNAVQKVIFSPDGKSLLSAA 553

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDP----QWVG 444
               D   +L+S++       L+ T    S P     W  
Sbjct: 554 W---DQTVRLWSLEG-----RLLQTLPGFSRPLYALAWSP 585



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 98/247 (39%), Gaps = 24/247 (9%)

Query: 186 SGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG    +L + +   G ++R L  S +  ++   F P+ ++V    +      +++L + 
Sbjct: 84  SGSADGTLRLWNPTSGYSVRTLPASGE--IWSAGFIPDGEEV----FGAGSEGKIWLWN- 136

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           R+ R  + +      I +  FS NGK  + S   D    I+S +    ++    ++    
Sbjct: 137 RMGRLTRTLEAQGGWIYSAAFSPNGKTLV-SGGLDGKARIWSAEGSLQSSL---SSGGGI 192

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + +++P+  +     +R+G   ++V    G + +++            + P G      
Sbjct: 193 YALAFAPEGDRFA-VGNRDGA--VWVWGL-GGELRQMLPAHRLPVSALAYGPGG----VL 244

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +G+   I V    G + R L   +   A  +SP G +L+      GD G         
Sbjct: 245 ASAGQDEKIVVWNARGQKLRGLSPGATALALAFSPDGHTLL----SGGDDGRAWRWNTAT 300

Query: 425 GRNETLI 431
           GR E ++
Sbjct: 301 GRAEGVL 307



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 86/275 (31%), Gaps = 39/275 (14%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++SG         +        +       +F   +SP+ + +A  +   +  +R++ 
Sbjct: 282 HTLLSGGDDGRAWRWNTATGRAEGVLEPFAASVFALAYSPDGRILA--SGGADKTVRLW- 338

Query: 242 MDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
                D   + +  F   +LA     FS +GK  L    +D  + ++          +L 
Sbjct: 339 -----DGQGRLLRTFSGPMLALTTLAFSPDGK-ILAGGSQDGWIWLWEA-ASGKLLRQLG 391

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  + ++ P    +V      G E L     N     R  +  E++     +SP G
Sbjct: 392 PHDNGAWALAFHPTLPLLV---SGGGDELLKFWNPNTGRLLRDFRAHESTVLAASFSPDG 448

Query: 359 DLIAFTKFSGEKFAIGVMKKDG----------------SQERLLVEDSNLQAPTWSPSGR 402
             +A     G    I +    G                           + A  +SP GR
Sbjct: 449 QTLASAGADGT---IRLWSTGGQPLRSLPPPRPGYVGQGDIVEPSHAGAVYALAYSPDGR 505

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            L  +     D   KL+ +   G+   ++     A
Sbjct: 506 MLASASH---DNTLKLWDLR-TGQELRVLRAHTNA 536



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 87/294 (29%), Gaps = 38/294 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWD-------VKDRKQIIGKKFFSSPAS----------WRKIAH 156
           GR++  G     V  RLWD             +       SP            W  +  
Sbjct: 323 GRILASGGADKTV--RLWDGQGRLLRTFSGPMLALTTLAFSPDGKILAGGSQDGWIWLWE 380

Query: 157 TISDDIYQSIT-GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
             S  + + +   + G +          +VSG     L   + +   +     + +  + 
Sbjct: 381 AASGKLLRQLGPHDNGAWALAFHPTLPLLVSGGGDELLKFWNPNTGRLLRDFRAHESTVL 440

Query: 216 EPRFSPNQQKVA----------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
              FSP+ Q +A          ++T               + +      +    + A  +
Sbjct: 441 AASFSPDGQTLASAGADGTIRLWSTGGQPLRSLPPPRPGYVGQGDIVEPSHAGAVYALAY 500

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREG 324
           S +G+    S   D  + ++  DL++      L           +SPD   ++       
Sbjct: 501 SPDGRMLA-SASHDNTLKLW--DLRTGQELRVLRAHTNAVQKVIFSPDGKSLL---SAAW 554

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            + + +    G   + +        +   WSP+G L   +  +     I + + 
Sbjct: 555 DQTVRLWSLEGRLLQTL-PGFSRPLYALAWSPRGILAVGSGTAARGGTISLFRL 607



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 79/226 (34%), Gaps = 22/226 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    +SP+ + +A A         +Y+   +     + +      + +  F+
Sbjct: 24  FSGHRSPVTAVAYSPDGRTLALAA-------DLYIQLYQGYTLKRTLRGHTDTVRSLAFN 76

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           S+G   L+S   D  + ++  +  S  + R         SA + PD  + VF +  EGK 
Sbjct: 77  SDGT-LLLSGSADGTLRLW--NPTSGYSVRTLPASGEIWSAGFIPDGEE-VFGAGSEGK- 131

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +++    G   + +       Y    +SP G  +      G+     +   +GS +  L
Sbjct: 132 -IWLWNRMGRLTRTLEAQGGWIYSA-AFSPNGKTLVSGGLDGKA---RIWSAEGSLQSSL 186

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                + A  ++P G          G+    ++   L G    ++ 
Sbjct: 187 SSGGGIYALAFAPEGDRFAV-----GNRDGAVWVWGLGGELRQMLP 227


>gi|326481488|gb|EGE05498.1| WD repeat protein [Trichophyton equinum CBS 127.97]
          Length = 577

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +++     + +   +FSP+   +A  + D      + + +T             + I
Sbjct: 180 YKEKFVLKGHRRGVSAVKFSPDGTMLASCSAD----ATIKIWNTATGTLVHTFEGHLAGI 235

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVF 318
               +S +G+    S   D+++ ++  D+ +                S ++SP  + +V 
Sbjct: 236 STISWSPDGETIA-SGSDDKSIRLW--DVMTGKPYPNPFVGHHNYVYSIAFSPKGNMLVS 292

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E +++     +   R             +   G LI      G    I +   
Sbjct: 293 GSY---DEAVFIWDVRSARIMRSLPAHSDPVAGVDFVRDGTLIVSCAGDG---LIRIWDS 346

Query: 379 DGSQ-ERLLVEDSNLQAPT--WSPSGRSLI 405
              Q  R LV + N    +  +SP+G+ ++
Sbjct: 347 ASGQCLRTLVHEDNPPVASVKFSPNGKFIL 376



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 57/179 (31%), Gaps = 11/179 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR-AP 250
           ++ + +     + +        +    +SP+ + +A  + D      + L D    +  P
Sbjct: 213 TIKIWNTATGTLVHTFEGHLAGISTISWSPDGETIASGSDDK----SIRLWDVMTGKPYP 268

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                  + + +  FS  G   + S   DEA+ I+ V   +     L           + 
Sbjct: 269 NPFVGHHNYVYSIAFSPKGNMLV-SGSYDEAVFIWDV-RSARIMRSLPAHSDPVAGVDFV 326

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            D + IV  +   G   + +  S      R +  +         +SP G  I      G
Sbjct: 327 RDGTLIVSCA---GDGLIRIWDSASGQCLRTLVHEDNPPVASVKFSPNGKFILAWSLDG 382



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 43/134 (32%), Gaps = 14/134 (10%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD + +   S       + +  +         +   A      WSP G+ IA      
Sbjct: 198 FSPDGTMLASCS---ADATIKIWNTATGTLVHTFEGHLAGISTISWSPDGETIASGSDDK 254

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 VM   G          +    +  +SP G  L+      G     ++  D+  R
Sbjct: 255 SIRLWDVM--TGKPYPNPFVGHHNYVYSIAFSPKGNMLV-----SGSYDEAVFIWDV--R 305

Query: 427 NETLINTPAYASDP 440
           +  ++ +    SDP
Sbjct: 306 SARIMRSLPAHSDP 319



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 54/167 (32%), Gaps = 28/167 (16%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    RLWDV   K          P     + H   + +Y      KG        
Sbjct: 248 ASGSDDKSIRLWDVMTGK----------PYPNPFVGHH--NYVYSIAFSPKG-------- 287

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
               +VSG    ++ + D   A I    P+    +    F  +   +     D      +
Sbjct: 288 --NMLVSGSYDEAVFIWDVRSARIMRSLPAHSDPVAGVDFVRDGTLIVSCAGDG----LI 341

Query: 240 YLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIY 285
            + D+   +  + + +  +  + + +FS NGK  L +   D  + ++
Sbjct: 342 RIWDSASGQCLRTLVHEDNPPVASVKFSPNGKFIL-AWSLDGCVRLW 387


>gi|326474422|gb|EGD98431.1| WD repeat protein [Trichophyton tonsurans CBS 112818]
          Length = 577

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 72/210 (34%), Gaps = 18/210 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +++     + +   +FSP+   +A  + D      + + +T             + I
Sbjct: 180 YKEKFVLKGHRRGVSAVKFSPDGTMLASCSAD----ATIKIWNTATGTLVHTFEGHLAGI 235

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVF 318
               +S +G+    S   D+++ ++  D+ +                S ++SP  + +V 
Sbjct: 236 STISWSPDGETIA-SGSDDKSIRLW--DVMTGKPYPNPFVGHHNYVYSIAFSPKGNMLVS 292

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E +++     +   R             +   G LI      G    I +   
Sbjct: 293 GSY---DEAVFIWDVRSARIMRSLPAHSDPVAGVDFVRDGTLIVSCAGDG---LIRIWDS 346

Query: 379 DGSQ-ERLLVEDSNLQAPT--WSPSGRSLI 405
              Q  R LV + N    +  +SP+G+ ++
Sbjct: 347 ASGQCLRTLVHEDNPPVASVKFSPNGKFIL 376



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 57/179 (31%), Gaps = 11/179 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR-AP 250
           ++ + +     + +        +    +SP+ + +A  + D      + L D    +  P
Sbjct: 213 TIKIWNTATGTLVHTFEGHLAGISTISWSPDGETIASGSDDK----SIRLWDVMTGKPYP 268

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                  + + +  FS  G   + S   DEA+ I+ V   +     L           + 
Sbjct: 269 NPFVGHHNYVYSIAFSPKGNMLV-SGSYDEAVFIWDV-RSARIMRSLPAHSDPVAGVDFV 326

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            D + IV  +   G   + +  S      R +  +         +SP G  I      G
Sbjct: 327 RDGTLIVSCA---GDGLIRIWDSASGQCLRTLVHEDNPPVASVKFSPNGKFILAWSLDG 382



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 43/134 (32%), Gaps = 14/134 (10%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD + +   S       + +  +         +   A      WSP G+ IA      
Sbjct: 198 FSPDGTMLASCS---ADATIKIWNTATGTLVHTFEGHLAGISTISWSPDGETIASGSDDK 254

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                 VM   G          +    +  +SP G  L+      G     ++  D+  R
Sbjct: 255 SIRLWDVM--TGKPYPNPFVGHHNYVYSIAFSPKGNMLV-----SGSYDEAVFIWDV--R 305

Query: 427 NETLINTPAYASDP 440
           +  ++ +    SDP
Sbjct: 306 SARIMRSLPAHSDP 319



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 54/167 (32%), Gaps = 28/167 (16%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    RLWDV   K          P     + H   + +Y      KG        
Sbjct: 248 ASGSDDKSIRLWDVMTGK----------PYPNPFVGHH--NYVYSIAFSPKG-------- 287

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
               +VSG    ++ + D   A I    P+    +    F  +   +     D      +
Sbjct: 288 --NMLVSGSYDEAVFIWDVRSARIMRSLPAHSDPVAGVDFVRDGTLIVSCAGDG----LI 341

Query: 240 YLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIY 285
            + D+   +  + + +  +  + + +FS NGK  L +   D  + ++
Sbjct: 342 RIWDSASGQCLRTLVHEDNPPVASVKFSPNGKFIL-AWSLDGCVRLW 387


>gi|325336659|gb|ADZ12933.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Riemerella
           anatipestifer RA-GD]
          Length = 668

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 87/245 (35%), Gaps = 41/245 (16%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN +K+AY+    E ++   L   + +  P    +  S +    +            + 
Sbjct: 128 SPNGKKIAYS---KEVLVEKVLGKEKYNDVPNTTAHIYSDLNHRHWD--------YFNQG 176

Query: 280 EAMDIYSVDLQ-SNATERLTNTLFINISA----------SYSPDSSQIVFE--------S 320
               I+ +DL  +++ + L      + S            +SPDSSQ++F          
Sbjct: 177 RYNHIFVIDLDKNSSPKDLLEGKKWD-SPQRPFGGAEDFVFSPDSSQLLFVMKPLEGAEY 235

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGV 375
            +     ++    +    K +++  +     P +SP G+ + +   + + +      + +
Sbjct: 236 AKSTNTDIFSYHFDSETIKNLTEANKGYDVSPKFSPDGNYLTWLSMARDGYEADKNDLKI 295

Query: 376 MKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           M         L +D +        WS + + L F+    G    +L+SI    +  T I 
Sbjct: 296 MDWKTGVITNLTKDWDESITGDFFWSQNNQLLYFTAAYRGTK--QLFSISPKSKKVTKIT 353

Query: 433 TPAYA 437
              + 
Sbjct: 354 EGTFD 358



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 59/174 (33%), Gaps = 7/174 (4%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD------EDILRVYL 241
                +     D   I+ LT +       P+FSP+   + + +         ++ L++  
Sbjct: 238 STNTDIFSYHFDSETIKNLTEANKGYDVSPKFSPDGNYLTWLSMARDGYEADKNDLKIMD 297

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             T +     +     S+     +S N +    +        ++S+  +S    ++T   
Sbjct: 298 WKTGVITNLTK-DWDESITGDFFWSQNNQLLYFTAAYRGTKQLFSISPKSKKVTKITEGT 356

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           F          +  +V  +D      L+ + +     K++++  +  Y +   S
Sbjct: 357 FDVNDIITETKNQLLVTRTDINHNADLFSVNTKNGTMKQVTEVNKEMYQNIATS 410


>gi|320107472|ref|YP_004183062.1| WD40 repeat-containing protein [Terriglobus saanensis SP1PR4]
 gi|319925993|gb|ADV83068.1| WD40 repeat, subgroup [Terriglobus saanensis SP1PR4]
          Length = 575

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 82/228 (35%), Gaps = 17/228 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FS +  ++     D+     + + D         + +  + ++A  +S++G R + S+ 
Sbjct: 133 KFSADGARILTVLDDN----TLSVWDAHTGEQTAGLMHHDNEVVAVAWSADGHRVVASLN 188

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + ++     S     L       +S  + SPD  +++         ++Y++ +   
Sbjct: 189 -DGTVHLWG--ASSGQPLHLPFHTVKPLSHIALSPDGKRVL----GSAGGEVYLLDAVTG 241

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +                 S  G        + + FA  +    G +   +V  + + + T
Sbjct: 242 EVLSPKLTYHDDVNVVALSNDGKHALIG--TDDDFAELLDPMTGKRLHRMVHGNAIFSAT 299

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +SP  R ++ S    GD  +K++  +   +           SD ++  
Sbjct: 300 FSPDSRFVLTSS---GDHTAKIWDANTGAQQGRDFTQTGPISDAEFSP 344



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 49/290 (16%), Positives = 91/290 (31%), Gaps = 40/290 (13%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             VV+ +   ++ +         +L     + L     SP+ ++V            VYL
Sbjct: 181 HRVVASLNDGTVHLWGASSGQPLHLPFHTVKPLSHIALSPDGKRVL-----GSAGGEVYL 235

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +D            +   +     S++GK ALI    D+        +      R+ +  
Sbjct: 236 LDAVTGEVLSPKLTYHDDVNVVALSNDGKHALIGT--DDDFAELLDPMTGKRLHRMVHGN 293

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I  SA++SPDS    F     G     +  +N   Q+     +     D  +SP    I
Sbjct: 294 AI-FSATFSPDSR---FVLTSSGDHTAKIWDANTGAQQGRDFTQTGPISDAEFSPDATHI 349

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD---------- 411
                      +   +   +   LL  ++ L    +S    SL+F+R +D          
Sbjct: 350 LTISHDHTA-RVWDARTGSALTPLLQHNAPLIDGGFSGD-ASLVFTRGRDQSMRIWSAVT 407

Query: 412 ------------GDTGSKLYSID-----LNGRNETLINTPAYASDPQWVG 444
                          G++    D      +G    +++ P     P W+ 
Sbjct: 408 GEATMLPIHYNSNKNGAEFSPTDSSLLVTDGNTAEILDMPPSDPAPVWLA 457



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 67/219 (30%), Gaps = 18/219 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            N+L V D             D  +    +S +  +V  +  D      V+L      + 
Sbjct: 147 DNTLSVWDAHTGEQTAGLMHHDNEVVAVAWSADGHRVVASLNDG----TVHLWGASSGQP 202

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISA 307
                +    +     S +GKR L         ++Y +D  +      +LT    +N+ A
Sbjct: 203 LHLPFHTVKPLSHIALSPDGKRVL----GSAGGEVYLLDAVTGEVLSPKLTYHDDVNVVA 258

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKF 366
             S D    +      G +  +    +    KR+ +    +  F   +SP    +  T  
Sbjct: 259 -LSNDGKHAL-----IGTDDDFAELLDPMTGKRLHRMVHGNAIFSATFSPDSRFVL-TSS 311

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 I        Q R   +   +    +SP    ++
Sbjct: 312 GDHTAKIWDANTGAQQGRDFTQTGPISDAEFSPDATHIL 350



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 12/119 (10%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A +S D ++I+   D      L V  ++  +Q       +       WS  G  +  + 
Sbjct: 131 GAKFSADGARILTVLD---DNTLSVWDAHTGEQTAGLMHHDNEVVAVAWSADGHRVVASL 187

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             G     G     G    L       L     SP G+ ++      G  G ++Y +D 
Sbjct: 188 NDGTVHLWGA--SSGQPLHLPFHTVKPLSHIALSPDGKRVL------GSAGGEVYLLDA 238


>gi|284036005|ref|YP_003385935.1| peptidase S9B dipeptidylpeptidase IV domain protein [Spirosoma
           linguale DSM 74]
 gi|283815298|gb|ADB37136.1| peptidase S9B dipeptidylpeptidase IV domain protein [Spirosoma
           linguale DSM 74]
          Length = 718

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 90/245 (36%), Gaps = 38/245 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISV 276
           R+SP+ +++AY   D   I    +++T        +   +  +  +P  S   +  ++SV
Sbjct: 172 RWSPDSKQIAYWQVDATKIRDYLMLNTTDSAYSHVVPVEYPKVGESP--SPT-RVGIVSV 228

Query: 277 QKDEAMDIYS--VDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQ 332
              +     +  +++  ++ +       I +   + P    ++ +  + ++ + +L++ +
Sbjct: 229 TGGQNAVPPTTWLNIPGDSQQ----HYLIRME--WLPAGGSVIVQQLNRKQNESKLFICK 282

Query: 333 SNGSDQKRISQDKEASYFDP--VWSPQ----------GDLIAFTKFSGEKFAIGVMKKDG 380
           + GS    +  + + ++ D    WS            G    +         +  +  DG
Sbjct: 283 AGGSSVTPVYTETDKAWIDGKARWSRDDPSGWEWLENGKSFVWVSEKDGWRHLYRITTDG 342

Query: 381 SQERLLVEDS-------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            +E LL           ++  PT       + F    +      LY   L+G+ +    T
Sbjct: 343 KKETLLTPGGYDIATISHIDEPT-----NKIYFIASPENTNQRYLYRTSLDGKGKAERVT 397

Query: 434 PAYAS 438
           PA  S
Sbjct: 398 PAGQS 402



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 63/203 (31%), Gaps = 25/203 (12%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +R+  VS +     +  +  +     +   YL            + P    V     + +
Sbjct: 221 TRVGIVSVTGGQNAVPPTTWLNIPGDSQQHYLIRME--------WLPAGGSVIVQQLNRK 272

Query: 235 DILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSN----------GKRALISVQKDEA 281
                  +      +   +    +   +    R+S +          GK  +   +KD  
Sbjct: 273 QNESKLFICKAGGSSVTPVYTETDKAWIDGKARWSRDDPSGWEWLENGKSFVWVSEKDGW 332

Query: 282 MDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQ--LYVMQSNG-SD 337
             +Y +         LT   + I   +     +++I F +  E   Q  LY    +G   
Sbjct: 333 RHLYRITTDGKKETLLTPGGYDIATISHIDEPTNKIYFIASPENTNQRYLYRTSLDGKGK 392

Query: 338 QKRISQDKEASYFDPVWSPQGDL 360
            +R++   ++   + + SP G  
Sbjct: 393 AERVTPAGQSGTHNYIISPNGKF 415


>gi|281212599|gb|EFA86759.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 392

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 60/156 (38%), Gaps = 10/156 (6%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDS 313
             R  I + +FS +GK  L S   D    I+  D +S   +R LT        AS+S DS
Sbjct: 52  GHRKSISSVKFSPDGKWLL-SASADNTAKIW--DARSGTFQRTLTGHKKGLSDASWSHDS 108

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             I   SD      + +  +   D  +  +  +   F   ++PQ + IA   F       
Sbjct: 109 KFICTASD---DTTVKIWDAETGDLIKTLKGHDNYVFSCNFNPQSNKIASGSFDETVIVW 165

Query: 374 GVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSR 408
            V  K G Q  R+      + +  ++  G  L+ S 
Sbjct: 166 DV--KSGKQLIRIPAHTEPVSSVHFNRDGSMLLTSS 199



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 79/217 (36%), Gaps = 26/217 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++       + +   +FSP+ + +  A+ D+       + D R     + +   +  +
Sbjct: 44  YKLKLTLKGHRKSISSVKFSPDGKWLLSASADN----TAKIWDARSGTFQRTLTGHKKGL 99

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
               +S + K    +   D  + I+  D ++    + L        S +++P S++I   
Sbjct: 100 SDASWSHDSKFIC-TASDDTTVKIW--DAETGDLIKTLKGHDNYVFSCNFNPQSNKIASG 156

Query: 320 SDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           S     E + V    +G    RI    E       ++  G ++  +   G    + V   
Sbjct: 157 SF---DETVIVWDVKSGKQLIRIPAHTE-PVSSVHFNRDGSMLLTSSIDGT---VRVWDS 209

Query: 379 -DGSQERLLVED---SNLQAP------TWSPSGRSLI 405
             GS  + L      ++  AP       +SP+G+ ++
Sbjct: 210 FSGSPLQTLSATLSSTDSVAPPIVSYSIFSPNGKYVL 246



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 95/271 (35%), Gaps = 36/271 (13%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            +KG  ++     S+ + +     ++ + D +  ++       D  +F   F+P   K+A
Sbjct: 95  HKKGLSDASWSHDSKFICTASDDTTVKIWDAETGDLIKTLKGHDNYVFSCNFNPQSNKIA 154

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             ++D+     V + D +  +   RI      + +  F+ +G   L +   D  + ++  
Sbjct: 155 SGSFDE----TVIVWDVKSGKQLIRIPAHTEPVSSVHFNRDGSMLL-TSSIDGTVRVWD- 208

Query: 288 DLQSNATERLTNTLFINISAS--------YSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               +  + L+ TL    S +        +SP+    V     + K +L+    N S+ K
Sbjct: 209 SFSGSPLQTLSATLSSTDSVAPPIVSYSIFSPNGKY-VLVGTLDSKLRLW----NYSENK 263

Query: 340 RIS-QDKEASYFDPVWS--PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL---- 392
            +   +   +    V+S    G  +       E   I +      +    +E        
Sbjct: 264 MLKVYEGHQNSQYCVFSTFSNGKWVV---SGSEDHMIYIWNLQTKEIVQRLEGHTDVVLA 320

Query: 393 --QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               PT       +I S   + D   K++ +
Sbjct: 321 VACHPT-----EEIIASGAINSDNTIKIWKV 346


>gi|253687548|ref|YP_003016738.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Pectobacterium carotovorum subsp. carotovorum PC1]
 gi|251754126|gb|ACT12202.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Pectobacterium carotovorum subsp. carotovorum PC1]
          Length = 747

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 85/263 (32%), Gaps = 40/263 (15%)

Query: 221 PNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P  +++AY       D    + + +   RI      +      +  P +   G+      
Sbjct: 230 PKHRQIAYPKPGDVLDRPQPVVIEVASRRITAIDPALFPNPYSLSYPVWQKGGRVFTFEY 289

Query: 277 QKDEA--MDIYSVDLQSNATERL---TNTLFINISA----------SYSPD---SSQIVF 318
            +       +  VD ++     L   T   FI+              Y  D    ++IV+
Sbjct: 290 NQRGHQVYRVIEVDSETGRARTLINETADTFIDYMPLTGVLTGSGKYYRHDLANGTEIVW 349

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------- 371
            S+R G + LY+  +     K      +       W  + + + +   SG K        
Sbjct: 350 ASERSGWQHLYLYDAVTGTVKNAITQGDWVVRAVNWVDEKNRVIYFSASGIKQGEDPYYT 409

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS-RKKDGDTGSKLY-------SIDL 423
               +  DGS+   L  +       +SP+G   I +  + D    + LY        + +
Sbjct: 410 HGYKIGFDGSELTALTPEPANHTLNFSPNGDYYIDTYSRYDLPPITTLYRTADNQAVMRV 469

Query: 424 NGRNETLINTPAYASDPQWVGFM 446
           N  + + +    +   P  V FM
Sbjct: 470 NTTDISRLRAAGW-RPP--VPFM 489



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 75/234 (32%), Gaps = 65/234 (27%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-----ASYSPDSSQIV- 317
           R S +GK   I     +  ++  +  Q      +T              S+SPDS+++V 
Sbjct: 151 RISPDGKWEAIV----DNHNLVLIGKQDGKRTTITQDGTAENEYEIERLSWSPDSARLVL 206

Query: 318 FESDREGKEQLYVMQSNGSDQ-----------------------------KRIS------ 342
           F + R  K  ++ ++S+ +DQ                             +RI+      
Sbjct: 207 FRTQRGEKRYVHYIESSPTDQLQPKHRQIAYPKPGDVLDRPQPVVIEVASRRITAIDPAL 266

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQAPTWSP- 399
                S   PVW   G +  F           V++ D    + R L+ ++      + P 
Sbjct: 267 FPNPYSLSYPVWQKGGRVFTFEYNQRGHQVYRVIEVDSETGRARTLINETADTFIDYMPL 326

Query: 400 ----------------SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                           +G  ++++ ++ G     LY   + G  +  I    + 
Sbjct: 327 TGVLTGSGKYYRHDLANGTEIVWASERSGWQHLYLYDA-VTGTVKNAITQGDWV 379



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 10/84 (11%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------T 396
           Q +E   +    SP G   A      +   + ++ K   +   + +D   +        +
Sbjct: 141 QKQEVPAYQSRISPDGKWEAIV----DNHNLVLIGKQDGKRTTITQDGTAENEYEIERLS 196

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYS 420
           WSP    L+  R + G+     Y 
Sbjct: 197 WSPDSARLVLFRTQRGEKRYVHYI 220


>gi|84625473|ref|YP_452845.1| dipeptidyl peptidase IV [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|84369413|dbj|BAE70571.1| dipeptidyl peptidase IV [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 774

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 102/354 (28%), Gaps = 80/354 (22%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD----------RDG-ANI 203
           A      +Y     E G     +L   +   + I   +L V D          RDG  N 
Sbjct: 141 ARARCSKLYAKDKPEPG-----VLSPDKRSEAFIRDWNLWVRDLASGQETQLTRDGVENF 195

Query: 204 RYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-------- 252
            Y T +      +     +SP+  K+A    D      +YL+ T++     +        
Sbjct: 196 GYATDNAGWQHTDNAIVAWSPDSSKIATFQQDQRKTGDMYLVSTKLGHPELQSWKYPLAG 255

Query: 253 ------------------------------------IGNFRSMILAPRFSSNGKRALI-- 274
                                               +     +    +++ + K      
Sbjct: 256 DKDVTMIERVIIDVPTRSVLRLKTAPDQHRSTLCDDVSCSPGLWDDVKWAPDSKTLAFAS 315

Query: 275 SVQKDEAMDIYSVDLQSNATE------RLTNTLFINISASYS--PDSSQIVFESDREGKE 326
           + +  +   +   D  + A          T      ++A+++  P S++ V+ S+R    
Sbjct: 316 TSRFHKQTWLRIADASTGAVRTAFDETVKTYYESGQVAANWAYLPASNEAVWFSERSDWG 375

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKD 379
           QLY+        KR     E +  + +        A+    G           +  +  D
Sbjct: 376 QLYLYDLATGKPKRAITTGEGNVTELLRVDPVTRTAWFVGVGRSAGVDPYYQQLWKVSLD 435

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G +  LL  +    +   SP G   + S          L     +GR  + I T
Sbjct: 436 GGEPVLLTPEPANHSIALSPDGARFVDSYSTSVTPPVTLLRDAGDGRTVSTIAT 489


>gi|145243266|ref|XP_001394169.1| WD repeat protein [Aspergillus niger CBS 513.88]
 gi|134078840|emb|CAK45899.1| unnamed protein product [Aspergillus niger]
          Length = 577

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 71/210 (33%), Gaps = 18/210 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            + +YL     + +   RFSP+   +A           V + DT   R         + I
Sbjct: 188 YHQKYLLRGHIRGVSAVRFSPDSSMIA----SGGADGAVKVWDTVTGRLIHTFEGHLAGI 243

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVF 318
               +S +G     S   D+ + ++  ++ +     +            ++SP  + +V 
Sbjct: 244 STISWSPDGATIA-SGSDDKTIRLW--NVLTGKAHPIPFVGHHNYVYQIAFSPKGNMLVS 300

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E +++     +   R                 G LIA     G    I +   
Sbjct: 301 GSY---DEAVFLWDVRSARVMRSLPAHSDPVGGIDVVWDGTLIASCATDG---LIRIWDT 354

Query: 379 DGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
              Q  R LV + N  + A  +SP+G+ ++
Sbjct: 355 ATGQCLRTLVHEDNPPVTAVKFSPNGKYVL 384



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +G    R    S  + SG    ++ V D     + +        +    +SP+   +A
Sbjct: 197 HIRGVSAVRFSPDSSMIASGGADGAVKVWDTVTGRLIHTFEGHLAGISTISWSPDGATIA 256

Query: 228 YATYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             + D      + L +    +  P       + +    FS  G   + S   DEA+ ++ 
Sbjct: 257 SGSDDK----TIRLWNVLTGKAHPIPFVGHHNYVYQIAFSPKGNMLV-SGSYDEAVFLWD 311

Query: 287 VDLQSNATERLTNTL----FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           V   +     L         I++   +  D + I   +  +G  +++   + G   + + 
Sbjct: 312 V-RSARVMRSLPAHSDPVGGIDV--VW--DGTLIASCAT-DGLIRIWDT-ATGQCLRTLV 364

Query: 343 QDKEASYFDPVWSPQGDLI 361
            +         +SP G  +
Sbjct: 365 HEDNPPVTAVKFSPNGKYV 383


>gi|126336934|ref|XP_001380141.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 334

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K +   +  I
Sbjct: 35  YALKFTIAGHTKPVSLVKFSPNGEWLASSSADK----LIKVWGAYDGKFEKTVSGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         R             ++  G LI  + + G    I      
Sbjct: 148 SF---DESVRLWDVKTGKCLRTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 202

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|289937655|ref|YP_003482257.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
 gi|289533346|gb|ADD07695.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Natrialba magadii ATCC 43099]
          Length = 655

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 48/127 (37%), Gaps = 9/127 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR--------VYLM 242
           N+L  +  DG++   +  S       PR SP+  ++A+ T+D   +            + 
Sbjct: 159 NALVRLAADGSDEPAVIASGHDFYAAPRLSPDGDRLAWLTWDHPRMPWDGTELHVATVMD 218

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D  +      +G     +  P ++ +G    ++  +    ++Y V L  ++ E +     
Sbjct: 219 DGALVDERVVLGGDSEAVFQPTWAPDGD-LYVASDRSGWWNLYRVPLDGSSPEPVLERTA 277

Query: 303 INISASY 309
              +  +
Sbjct: 278 EYGAPLW 284



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 95/309 (30%), Gaps = 58/309 (18%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
              +  R   H   D        E+   + R + V            +  +  DG N+R 
Sbjct: 22  VVASDARTFGHVAVDGDEVYWREERPTEDGRGVIVRHDGEG------IEGVTPDGVNVRT 75

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           L        F      +   V +  +DD+ + R       +   P               
Sbjct: 76  LVHEYGGGDFT---VHDGT-VFFTAFDDQRVYRQPPDGDPVAITPAPESERGLRYADFEV 131

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           +S+G+      +  +                +T         +                 
Sbjct: 132 ASDGRHVYCVRENHD----------------VTADEDGAEEPT----------------- 158

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------FSGEKFAIGVMKK 378
             L  + ++GSD+  +       Y  P  SP GD +A+         + G +  +  +  
Sbjct: 159 NALVRLAADGSDEPAVIASGHDFYAAPRLSPDGDRLAWLTWDHPRMPWDGTELHVATVMD 218

Query: 379 DGS--QERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINT 433
           DG+   ER+++  +   +  PTW+P G  L  +  + G     LY + L+G   E ++  
Sbjct: 219 DGALVDERVVLGGDSEAVFQPTWAPDGD-LYVASDRSG--WWNLYRVPLDGSSPEPVLER 275

Query: 434 PAYASDPQW 442
            A    P W
Sbjct: 276 TAEYGAPLW 284


>gi|255014684|ref|ZP_05286810.1| dipeptidyl aminopeptidase [Bacteroides sp. 2_1_7]
          Length = 744

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 35/155 (22%)

Query: 308 SYSPDS--------SQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQG 358
           S+S D+        +Q V+  D  G    +V+       +++ +   E+S     +SP G
Sbjct: 102 SWSADNEKVLIYNNTQRVWRYDTRG--DYWVLNLKDGALRQLGKGMPESSMMFAKFSPDG 159

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL------------------QAPTWSPS 400
             +A+   +     I V   D  +   L +D +                       WSP 
Sbjct: 160 TRVAYVSNN----NIYVEDIDSGKITQLTKDGSDTIVNGTFDWVYEEEFSCRDGFRWSPD 215

Query: 401 GRSLIFS-RKKDGDTGSKLYSIDLNGRNETLINTP 434
           G+ + +      G     + + +++     +I+ P
Sbjct: 216 GKHIAYWQSDTKGTGVFDIIN-NVDSIYAKVIHFP 249



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 101/322 (31%), Gaps = 73/322 (22%)

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           ++ V     +    V++ +DGA  +      +  +   +FSP+  +VAY + ++     +
Sbjct: 116 TQRVWRYDTRGDYWVLNLKDGALRQLGKGMPESSMMFAKFSPDGTRVAYVSNNN-----I 170

Query: 240 YLMDTRIDRAPKRIGNFRSMIL----------------APRFSSNGKRALISVQKDEAMD 283
           Y+ D    +  +   +    I+                  R+S +GK         +   
Sbjct: 171 YVEDIDSGKITQLTKDGSDTIVNGTFDWVYEEEFSCRDGFRWSPDGKHIAYWQSDTKGTG 230

Query: 284 IYSV--DLQSNATERL-------------------------TNTLFINISAS-------- 308
           ++ +  ++ S   + +                         T  + I             
Sbjct: 231 VFDIINNVDSIYAKVIHFPYPKAGTTNSAVKVGYVSSTGGNTTWIAIPGDPRNNYLPRME 290

Query: 309 YSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLI 361
           + P+S ++ F    +  +   ++++ + + +    I  D +A++ D      W       
Sbjct: 291 FIPESDEL-FIQQLNRPQNTNKVWIAKISDNSLNNIFTDTDAAWLDTNDNIQWLKDNRYF 349

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-----SLIFSRKKDGDTGS 416
            +         +  + +DG + + + +         SP G       + F    D  T  
Sbjct: 350 TWESERSGWRHLYRISRDGKEIQPITKG---DFDYISPVGTDLQKGWVYFIASPDNFTQR 406

Query: 417 KLYSIDLNGRNETLINTPAYAS 438
            LY     G  E    +P   S
Sbjct: 407 YLYRAKAFGNGEVERVSPMEQS 428


>gi|17230661|ref|NP_487209.1| hypothetical protein all3169 [Nostoc sp. PCC 7120]
 gi|17132264|dbj|BAB74868.1| all3169 [Nostoc sp. PCC 7120]
          Length = 559

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 74/229 (32%), Gaps = 22/229 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  K+A       D   + L +    +           + +  FS  G   L +  
Sbjct: 276 AISPDGNKLA----SGGDDKIIRLWELNTQKLLACFSGHSQAVTSVSFSPQG-EILATAS 330

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + ++ +   S     L        S S+SP+   +   S     +Q+ +       
Sbjct: 331 DDKTIKLWHLPTSS-EVFTLNGHTNPVKSVSFSPNGQILASGS---WDKQVKLWDVTTGK 386

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLV-EDSNLQA 394
           +    +  +       +SPQG+++A   F      + I       +  + L      + A
Sbjct: 387 EIYALKAHQLQVSAVAFSPQGEILASASFDRTIRLWQITQNHPRYTLIKTLSGHTRAVLA 446

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             +SP G+ L        D   KL+ I+      TL+          W 
Sbjct: 447 IAFSPDGKILATGSD---DNTIKLWDINTGQLIATLLGH-------SWS 485



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 68/213 (31%), Gaps = 20/213 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     ++ +     ++  +        +    FSPN Q +A  ++D     +V L D  
Sbjct: 328 TASDDKTIKLWHLPTSSEVFTLNGHTNPVKSVSFSPNGQILASGSWDK----QVKLWDVT 383

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFI 303
             +    +   +  + A  FS  G   L S   D  + ++ +   +    R T   TL  
Sbjct: 384 TGKEIYALKAHQLQVSAVAFSPQG-EILASASFDRTIRLWQI---TQNHPRYTLIKTLSG 439

Query: 304 NISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +  A    ++SPD   +   SD      + +   N             S     ++    
Sbjct: 440 HTRAVLAIAFSPDGKILATGSD---DNTIKLWDINTGQLIATLLGHSWSVVAVTFTADNK 496

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            +    +      I + K   ++E + +     
Sbjct: 497 TLISASWDKT---IKLWKVSTTEEIVTLASHLD 526



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 67/182 (36%), Gaps = 5/182 (2%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG     + + D       Y   +    +    FSP  + +A A++D    L     +  
Sbjct: 370 SGSWDKQVKLWDVTTGKEIYALKAHQLQVSAVAFSPQGEILASASFDRTIRLWQITQNHP 429

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                K +      +LA  FS +GK  L +   D  + ++ ++        L ++  + +
Sbjct: 430 RYTLIKTLSGHTRAVLAIAFSPDGK-ILATGSDDNTIKLWDINTGQLIATLLGHSWSV-V 487

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + +++ D+  ++  S     + + + + + +++         S      +P   +IA + 
Sbjct: 488 AVTFTADNKTLISAS---WDKTIKLWKVSTTEEIVTLASHLDSVCAVAVNPVTQVIASSS 544

Query: 366 FS 367
             
Sbjct: 545 RD 546



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 65/188 (34%), Gaps = 40/188 (21%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S   Q+L +G   K+         +LWDV   K+I   K           AH +   +  
Sbjct: 362 SPNGQILASGSWDKQ--------VKLWDVTTGKEIYALK-----------AHQL--QVSA 400

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY----LTPSRDQILFEPRFS 220
                +G+  +   F            ++ +      + RY          + +    FS
Sbjct: 401 VAFSPQGEILASASF----------DRTIRLWQITQNHPRYTLIKTLSGHTRAVLAIAFS 450

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + +A  + D+     + L D    +    +      ++A  F+++ K   IS   D+
Sbjct: 451 PDGKILATGSDDN----TIKLWDINTGQLIATLLGHSWSVVAVTFTADNKTL-ISASWDK 505

Query: 281 AMDIYSVD 288
            + ++ V 
Sbjct: 506 TIKLWKVS 513



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 50/131 (38%), Gaps = 15/131 (11%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           TN+L I      SPD +++    D    + + + + N             +     +SPQ
Sbjct: 272 TNSLAI------SPDGNKLASGGD---DKIIRLWELNTQKLLACFSGHSQAVTSVSFSPQ 322

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G+++A T    +   +  +        L    + +++ ++SP+G+ L       G    +
Sbjct: 323 GEILA-TASDDKTIKLWHLPTSSEVFTLNGHTNPVKSVSFSPNGQILA-----SGSWDKQ 376

Query: 418 LYSIDLNGRNE 428
           +   D+    E
Sbjct: 377 VKLWDVTTGKE 387


>gi|150008856|ref|YP_001303599.1| dipeptidyl aminopeptidase [Parabacteroides distasonis ATCC 8503]
 gi|256841151|ref|ZP_05546658.1| dipeptidyl aminopeptidase [Parabacteroides sp. D13]
 gi|149937280|gb|ABR43977.1| dipeptidyl aminopeptidase [Parabacteroides distasonis ATCC 8503]
 gi|256736994|gb|EEU50321.1| dipeptidyl aminopeptidase [Parabacteroides sp. D13]
          Length = 744

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 35/155 (22%)

Query: 308 SYSPDS--------SQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQG 358
           S+S D+        +Q V+  D  G    +V+       +++ +   E+S     +SP G
Sbjct: 102 SWSADNEKVLIYNNTQRVWRYDTRG--DYWVLNLKDGALRQLGKGMPESSMMFAKFSPDG 159

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL------------------QAPTWSPS 400
             +A+   +     I V   D  +   L +D +                       WSP 
Sbjct: 160 TRVAYVSNN----NIYVEDIDSGKITQLTKDGSDTIVNGTFDWVYEEEFSCRDGFRWSPD 215

Query: 401 GRSLIFS-RKKDGDTGSKLYSIDLNGRNETLINTP 434
           G+ + +      G     + + +++     +I+ P
Sbjct: 216 GKHIAYWQSDTKGTGVFDIIN-NVDSIYAKVIHFP 249



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 101/322 (31%), Gaps = 73/322 (22%)

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           ++ V     +    V++ +DGA  +      +  +   +FSP+  +VAY + ++     +
Sbjct: 116 TQRVWRYDTRGDYWVLNLKDGALRQLGKGMPESSMMFAKFSPDGTRVAYVSNNN-----I 170

Query: 240 YLMDTRIDRAPKRIGNFRSMIL----------------APRFSSNGKRALISVQKDEAMD 283
           Y+ D    +  +   +    I+                  R+S +GK         +   
Sbjct: 171 YVEDIDSGKITQLTKDGSDTIVNGTFDWVYEEEFSCRDGFRWSPDGKHIAYWQSDTKGTG 230

Query: 284 IYSV--DLQSNATERL-------------------------TNTLFINISAS-------- 308
           ++ +  ++ S   + +                         T  + I             
Sbjct: 231 VFDIINNVDSIYAKVIHFPYPKAGTTNSAVKVGYVSSTGGNTTWIAIPGDPRNNYLPRME 290

Query: 309 YSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLI 361
           + P+S ++ F    +  +   ++++ + + +    I  D +A++ D      W       
Sbjct: 291 FIPESDEL-FIQQLNRPQNTNKVWIAKISDNSLNNIFTDTDAAWLDTNDNIQWLKDNRYF 349

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-----SLIFSRKKDGDTGS 416
            +         +  + +DG + + + +         SP G       + F    D  T  
Sbjct: 350 TWESERSGWRHLYRISRDGKEIQPITKG---DFDYISPVGTDLQKGWVYFIASPDNFTQR 406

Query: 417 KLYSIDLNGRNETLINTPAYAS 438
            LY     G  E    +P   S
Sbjct: 407 YLYRAKAFGNGEVERVSPMEQS 428


>gi|148262583|ref|YP_001229289.1| hypothetical protein Gura_0501 [Geobacter uraniireducens Rf4]
 gi|146396083|gb|ABQ24716.1| hypothetical protein Gura_0501 [Geobacter uraniireducens Rf4]
          Length = 457

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 9/116 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            F+ +G+R + + +K     +  V+ +              +S  +SPD   + + + ++
Sbjct: 351 TFAPDGRRHVYTAEKKGRCFV-VVNGKEGPP------FDRVVSPRFSPDGRFLTYRARQD 403

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           GK  L V  ++G   +R         F+ V++  G  +A+    G K A  V K D
Sbjct: 404 GKRFLVVADADGRMIRR--HPAFDMVFEQVYTADGKSVAYGVKDGNKLAWRVEKLD 457



 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 39/116 (33%), Gaps = 15/116 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P+ ++  Y          V            + G     +++PRFS +G+      +
Sbjct: 351 TFAPDGRRHVYTAEKKGRCFVVVNG---------KEGPPFDRVVSPRFSPDGRFLTYRAR 401

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVM 331
           +D    +   D       R       ++     Y+ D   + +   ++G +  + +
Sbjct: 402 QDGKRFLVVADADGRMIRR---HPAFDMVFEQVYTADGKSVAYGV-KDGNKLAWRV 453



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 73/205 (35%), Gaps = 21/205 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F    + +AY     +   +  ++D +I+       +  S+   P  S N K     +  
Sbjct: 273 FDKTGRSLAYV--GQKGAEKYLVLDGQIEPL-----SGASLGEHPVISPNQKSLGTVLVT 325

Query: 279 DE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D        +   S+  +       IN   +++PD  + V+ ++++G+  + V    G  
Sbjct: 326 DLVYYHQAFMPQASDEKK----YDAIN-ELTFAPDGRRHVYTAEKKGRCFVVVNGKEGPP 380

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             R+          P +SP G  + +      K  + V   DG   R       +    +
Sbjct: 381 FDRV--------VSPRFSPDGRFLTYRARQDGKRFLVVADADGRMIRRHPAFDMVFEQVY 432

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSID 422
           +  G+S+ +  K       ++  +D
Sbjct: 433 TADGKSVAYGVKDGNKLAWRVEKLD 457



 Score = 43.5 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 12/99 (12%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQ----DKEASYFDPVWSPQGDLIAFTKFS 367
           D     F  +  G     V+++  S  + + +     + A       SP G  +AF    
Sbjct: 67  DGLTSYF--NETGTGAASVVKTGPSSFRVLHKHKVSGEYAGVESVTLSPDGRRLAFVIPE 124

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
             KF    M  DG   R       + +P ++P  R L +
Sbjct: 125 NGKFR---MVIDGRMGRPF---EQIGSPVFTPDSRHLAY 157



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 49/130 (37%), Gaps = 13/130 (10%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + SPD  ++ F     GK ++ +    G   ++I          PV++P    +A+   S
Sbjct: 110 TLSPDGRRLAFVIPENGKFRMVIDGRMGRPFEQI--------GSPVFTPDSRHLAYKVKS 161

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           G  + + ++ +  + ER LV       P  S     +I   K    +   + +   + + 
Sbjct: 162 GALWRL-IVDEKLADERFLVYG----EPRMSKGLSRIIIMEKASEQSPYAIVAYTSDLKR 216

Query: 428 ETLINTPAYA 437
             +   PA  
Sbjct: 217 TVIKEIPAQD 226



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/67 (11%), Positives = 25/67 (37%), Gaps = 7/67 (10%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           ++    + + +   S +G+R    + ++    +          E++        S  ++P
Sbjct: 98  KVSGEYAGVESVTLSPDGRRLAFVIPENGKFRMVIDGRMGRPFEQI-------GSPVFTP 150

Query: 312 DSSQIVF 318
           DS  + +
Sbjct: 151 DSRHLAY 157



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 32/69 (46%), Gaps = 10/69 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +++A+   ++       ++D R+ R  ++IG       +P F+ + +     V K 
Sbjct: 112 SPDGRRLAFVIPENGKFR--MVIDGRMGRPFEQIG-------SPVFTPDSRHLAYKV-KS 161

Query: 280 EAMDIYSVD 288
            A+    VD
Sbjct: 162 GALWRLIVD 170


>gi|298248961|ref|ZP_06972765.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297546965|gb|EFH80832.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 351

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 82/245 (33%), Gaps = 19/245 (7%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  + +      D  +    +SP+   +A A+        + +      +    +     
Sbjct: 13  DPTSSQRWVAHLDDHVNSLAWSPDGCWLAAASVSGP----ITIFSGTTGQVAHTLTGHGF 68

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIV 317
                 ++++G R   SV +D  + ++  + Q+      L          +++P  + + 
Sbjct: 69  GTCELGWNADGSRLA-SVGQDGKVKLW--NPQTGEERCSLPGGGSWVEHLAWNPQGNLLA 125

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             + R    +L +  +      R   D  ++  D  W P  +    T  +        + 
Sbjct: 126 TAAGR----KLRLWDAVEGKLVREYPDHRSTIADIGWKPASN--VLTSAAYGSLTFWSID 179

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           KD   ER   + S L    W+P G+ +  +  +D      ++    +G +  +   P   
Sbjct: 180 KDEPLERFEWKGSILTM-AWAPDGKHIA-TGDQDATVHFWIFQ---SGEDLQMWGYPTKV 234

Query: 438 SDPQW 442
            +  W
Sbjct: 235 RELSW 239



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 50/154 (32%), Gaps = 12/154 (7%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           ++  IL   ++ +GK    +  +D  +  +    QS    ++          S++     
Sbjct: 189 WKGSILTMAWAPDGKHIA-TGDQDATVHFWIF--QSGEDLQMWGYPTKVRELSWNSTGRY 245

Query: 316 IVFESDREGKEQLYVMQSNGSDQ---KRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKF 371
           +       G +   V   +G      K I  +  A+      +  +G LIA     G+  
Sbjct: 246 LA----TGGSQTATVWDCSGKGPAGSKPIELEGHANLITALAFQHKGSLIATASNEGKAI 301

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              V +            S +   +WSP  + + 
Sbjct: 302 FWNVERP-RRPLVQADFGSGISQLSWSPDDQYVA 334


>gi|268316742|ref|YP_003290461.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Rhodothermus marinus DSM 4252]
 gi|262334276|gb|ACY48073.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Rhodothermus marinus DSM 4252]
          Length = 910

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 36/107 (33%), Gaps = 18/107 (16%)

Query: 354 WSPQGDLIAFTKFSGE----KFA----IGVMKKDGSQ----ERLLVEDSNLQAPTWSPSG 401
            +P G  I + +        +F     +  + + G+        L    N   P WSP G
Sbjct: 43  IAPDGRRIVWVRRRANFDEDRFETDLFLTYLDQKGTDGLPLTVQLTRSGNNHNPQWSPDG 102

Query: 402 RSLIFSRKK-----DGDTGSKLYSIDL-NGRNETLINTPAYASDPQW 442
           R + F   +     D   GS+L+ +D   G    L        D  W
Sbjct: 103 RYIAFLSSRKTDDDDKTQGSQLWLLDTFGGEPYRLTELDVPVQDFAW 149



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 72/214 (33%), Gaps = 53/214 (24%)

Query: 266 SSNGKRALISVQK-DEAMDIYSVDL----------QSNATE-RLTNTLFINISASYSPDS 313
           + +G+R +   ++ +   D +  DL                 +LT +   N +  +SPD 
Sbjct: 44  APDGRRIVWVRRRANFDEDRFETDLFLTYLDQKGTDGLPLTVQLTRS-GNNHNPQWSPDG 102

Query: 314 SQIVFESDR-------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             I F S R           QL+++ + G +  R++ + +    D  W      + F   
Sbjct: 103 RYIAFLSSRKTDDDDKTQGSQLWLLDTFGGEPYRLT-ELDVPVQDFAW-FDSTRLVFAAR 160

Query: 367 SGEKF------------------------AIGVMKKDGSQERLLVED-SNLQAPTWSPSG 401
               +                         +  M  D  +   L E+   +      P+G
Sbjct: 161 ETPTYDEQQRKKQKDDAQAVEDTTEFYPVRLFRMAIDSKKIERLTENEGEILEFAIDPTG 220

Query: 402 RSLIFS-----RKKDGDTGSKLYSIDLNGRNETL 430
           R +++S        D     + Y +DL  RNET+
Sbjct: 221 RFIVYSIDPHPVDADARHQPRQYLLDLE-RNETV 253



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 77/226 (34%), Gaps = 45/226 (19%)

Query: 176 RILFVSESVVSGIIKNS----LCVMDRDGAN--IRYLTPSRDQILFEPRFSPNQQKVAYA 229
           RI++V         +      L  +D+ G +     +  +R      P++SP+ + +A+ 
Sbjct: 49  RIVWVRRRANFDEDRFETDLFLTYLDQKGTDGLPLTVQLTRSGNNHNPQWSPDGRYIAFL 108

Query: 230 TY------DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +       D     +++L+DT     P R+      +    +  +  R + + ++    D
Sbjct: 109 SSRKTDDDDKTQGSQLWLLDT-FGGEPYRLTELDVPVQDFAW-FDSTRLVFAARETPTYD 166

Query: 284 ------------------------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                                   ++ + + S   ERLT      +  +  P    IV+ 
Sbjct: 167 EQQRKKQKDDAQAVEDTTEFYPVRLFRMAIDSKKIERLTENEGEILEFAIDPTGRFIVYS 226

Query: 320 -------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  +D   + + Y++    ++   I  ++       VW+  G
Sbjct: 227 IDPHPVDADARHQPRQYLLDLERNETVEIFAERYFDPERFVWTRDG 272


>gi|218961893|ref|YP_001741668.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167730550|emb|CAO81462.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 911

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 83/255 (32%), Gaps = 44/255 (17%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYL----MDTRIDRAPKRIGNF--RSMILA 262
           +     + P F+P+ + + +++    D  +  +        +      +           
Sbjct: 126 NTSDSEYAPVFTPDNKYMYFSSLRRSDFGKENIFLSQQQNNVWSEAIEVTELCTDYNESL 185

Query: 263 PRFSSNGKRAL---ISVQKDEAMDIYSVDLQSNATERLT--------NTLFINISASYSP 311
              S +G  A       +     DIY   L S    R T        ++ + ++      
Sbjct: 186 GSLSLDGNTAYLFGYYSKDTTNGDIYQTTLDSKG--RWTKPIMIKEVSSKYYDLQPFVWR 243

Query: 312 DSSQIVF-ESDREG---KEQLYVM-QSNGSDQKRISQD----KEASYFDPVWSPQGDLIA 362
           D  +++F  S+R+G      +YV    NG     +S             P  SP G  + 
Sbjct: 244 D--KVMFLTSNRDGDHKNYDIYVSENINGIWTTPVSVGDIVNTSYDEQSPFLSPDGKYLY 301

Query: 363 FTKFSGEKF---AIGVMKKDGSQERLLVEDSNL----------QAPTWSPSGRSLIFSRK 409
           F  F    +    I V  + G+      +  N+          +    +P GR+      
Sbjct: 302 FASFGHNSYGGNDIFVSTRIGNSWTEWSKPVNMGPIINSVKDDRYFVIAPDGRTAYLCSN 361

Query: 410 KDGDTGSK-LYSIDL 423
           + G  G + +Y+IDL
Sbjct: 362 RAGGMGQEDIYTIDL 376



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 68/202 (33%), Gaps = 37/202 (18%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDR----KQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           G +  +G       +   D  +       +  K  ++ P   ++++    D        +
Sbjct: 186 GSLSLDGNTAYLFGYYSKDTTNGDIYQTTLDSKGRWTKPIMIKEVSSKYYDL-------Q 238

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-------SRDQILFEPRFSPN 222
              +  +++F++ +         + V +    N  + TP       +       P  SP+
Sbjct: 239 PFVWRDKVMFLTSNRDGDHKNYDIYVSEN--INGIWTTPVSVGDIVNTSYDEQSPFLSPD 296

Query: 223 QQKVAYATYDDED-ILRVYLMDTRIDRAPKRIGNFRSMILAP-----------RFSSNGK 270
            + + +A++           + TRI  +       + + + P             + +G+
Sbjct: 297 GKYLYFASFGHNSYGGNDIFVSTRIGNSWTE--WSKPVNMGPIINSVKDDRYFVIAPDGR 354

Query: 271 RALISVQKDEAM---DIYSVDL 289
            A +   +   M   DIY++DL
Sbjct: 355 TAYLCSNRAGGMGQEDIYTIDL 376


>gi|290538|gb|AAA62041.1| f416 [Escherichia coli]
          Length = 416

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 57/161 (35%), Gaps = 26/161 (16%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGXEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 DSNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +  +P+     +SP G+ L +        G +L+  + +
Sbjct: 382 -HHANSPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGXEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT     + SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTEHHANSPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +    D 
Sbjct: 310 TQIAFLM---RDDNGIVQLWLISPQGXEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 364

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 365 RIACAHAQSGEVEYLTEHHANSPSAD-AVVFSPDGQWLAW 403


>gi|46138203|ref|XP_390792.1| hypothetical protein FG10616.1 [Gibberella zeae PH-1]
          Length = 1571

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 97/284 (34%), Gaps = 41/284 (14%)

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--------FSPNQQ--KVAYATYDDEDI 236
            G   + L  + +D    R+++  +  I   P         FSP     + A+  +  +  
Sbjct: 843  GTEYHELASVLQD--TRRFVSNFKSAIELFPLQTYVSGLLFSPRSSVARQAFQQHAFKTS 900

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
                 +    D   + +   +S +L   FS +GK    S  +D  + ++  D+ +    +
Sbjct: 901  WIDLPILEDWDACVQTLEGHKSTVLNLAFSGDGKWLA-SASEDSTLRVW--DVATGVCLQ 957

Query: 297  LTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                 + ++ A ++SPDS+ +   S        +   SN   ++     K  +    ++S
Sbjct: 958  TMAYPYADVQAVAFSPDSACLASVST-NYAIDFWDTTSNEFKKRHKVNTKGTNVLGLLFS 1016

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQ----ERLLVEDSNLQAP----TWSPSGRSLIFS 407
            P G  +A   +S     + +             L     +   P    ++S   + ++  
Sbjct: 1017 PDGKWLA--SWSDGP-KVQIRDAKTGNCIYDFTLEQGRGSAIGPQTRFSFSSDSQRILVG 1073

Query: 408  RKKDGDTGSKLYSIDLNGRNET-------LINTPAYASDPQWVG 444
                G          +NG   T        + T A+  D  WVG
Sbjct: 1074 SGTVGIRDI------VNGSWITENQIWPGRLLTSAFLPDGSWVG 1111



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 92/303 (30%), Gaps = 54/303 (17%)

Query: 158  ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR--DQILF 215
            I D   +   G      +R  F S+S    +   ++ + D    N  ++T ++     L 
Sbjct: 1042 IYDFTLEQGRGSAIGPQTRFSFSSDSQRILVGSGTVGIRDI--VNGSWITENQIWPGRLL 1099

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP------------ 263
               F P+   V +A  +   +  ++ +          I       L P            
Sbjct: 1100 TSAFLPDGSWVGHAYGEHGHL--IWRLSDSGAECKTEILGEDGCGLPPSGQYPLDRPLSS 1157

Query: 264  -----RFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNT-LFINISASYSPDSS 314
                  FS +GK+     Q    + I  V   D+         +    +  + ++S +S 
Sbjct: 1158 WERPSAFSGDGKQIATCTQYPFRIAIVEVATGDVSYADARSSADGTSGLPTAMAWSSNSQ 1217

Query: 315  QIVFESDREGKEQLYVMQS--------NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +   +  +G  ++ +           +   QKRI             S  G  +A    
Sbjct: 1218 WLA-VAGVQGNGEITIWDPKAIKNGSKDNGIQKRIHTM--------ALSADGQRLATGSQ 1268

Query: 367  SGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             G    + +         +L     DS +    +SPSG  L            K++++  
Sbjct: 1269 DGT---VEIQDMARPSNNILTLKGHDSTIHGIVFSPSGNMLA----TQCTYHVKIWNMKA 1321

Query: 424  NGR 426
             G 
Sbjct: 1322 AGE 1324



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 62/381 (16%), Positives = 111/381 (29%), Gaps = 66/381 (17%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
            +S    +        +P    W+S  +Q L    V   G      E  +WD K  K    
Sbjct: 1191 VSYADARSSADGTSGLPTAMAWSS-NSQWLAVAGVQGNG------EITIWDPKAIKN--- 1240

Query: 142  KKFFSSPASWRKIAHTIS-DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
                S     +K  HT++     Q +     D    I  ++                   
Sbjct: 1241 ---GSKDNGIQKRIHTMALSADGQRLATGSQDGTVEIQDMARP----------------- 1280

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD--TRIDRAPKRIGNFRS 258
            +N        D  +    FSP+   +A        I  +          +A      F +
Sbjct: 1281 SNNILTLKGHDSTIHGIVFSPSGNMLATQCTYHVKIWNMKAAGECAHTFKAGPIDIRFIT 1340

Query: 259  MILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDS 313
            +   P  FS +  +            +   DL       L      ++       +SPD 
Sbjct: 1341 ISFWPMAFSVDDSQFAFV---KGEDMVELHDLTKQTVSEL------DMEHVSCLVFSPDG 1391

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
              +    ++ GK  + +      D +              +S  G L+A+   +GE + +
Sbjct: 1392 LSLA-AGNKVGK--IKICDLQTKDVQEHKSGSSQYPHAITFSSDGKLLAYATTTGEIY-V 1447

Query: 374  GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-----RNE 428
              M  +    +L       Q  ++S  GRSL+    + G    + +   ++G      N 
Sbjct: 1448 WEMPSERGIFKLETGLLTAQL-SFSSDGRSLL---TEQGRLTPECWPSVVDGQDAEAENN 1503

Query: 429  TLINTP------AYASDPQWV 443
             L   P          D  W+
Sbjct: 1504 QLAAAPFVTRGYGIGFDGTWL 1524


>gi|301311900|ref|ZP_07217822.1| dipeptidyl peptidase IV [Bacteroides sp. 20_3]
 gi|300830002|gb|EFK60650.1| dipeptidyl peptidase IV [Bacteroides sp. 20_3]
          Length = 744

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 56/153 (36%), Gaps = 31/153 (20%)

Query: 308 SYSPDSSQI-VFESDR-----EGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDL 360
           S+S D+ ++ ++ + R     + +   +V+       +++ +   E+S     +SP G  
Sbjct: 102 SWSADNEKVLIYNNTRRVWRYDTRGDYWVLNLKDGALRQLGKGMPESSMMFAKFSPDGTR 161

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL------------------QAPTWSPSGR 402
           +A+   +     I V   D  +   L +D +                       WSP G+
Sbjct: 162 VAYVSNN----NIYVEDIDSGKITQLTKDGSDTIVNGTFDWVYEEEFSCRDGFRWSPDGK 217

Query: 403 SLIFS-RKKDGDTGSKLYSIDLNGRNETLINTP 434
            + +      G     + + +++     +I+ P
Sbjct: 218 HIAYWQSDTKGTGVFDIIN-NVDSIYAKVIHFP 249



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/322 (13%), Positives = 100/322 (31%), Gaps = 73/322 (22%)

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  V     +    V++ +DGA  +      +  +   +FSP+  +VAY + ++     +
Sbjct: 116 TRRVWRYDTRGDYWVLNLKDGALRQLGKGMPESSMMFAKFSPDGTRVAYVSNNN-----I 170

Query: 240 YLMDTRIDRAPKRIGNFRSMIL----------------APRFSSNGKRALISVQKDEAMD 283
           Y+ D    +  +   +    I+                  R+S +GK         +   
Sbjct: 171 YVEDIDSGKITQLTKDGSDTIVNGTFDWVYEEEFSCRDGFRWSPDGKHIAYWQSDTKGTG 230

Query: 284 IYSV--DLQSNATERL-------------------------TNTLFINISAS-------- 308
           ++ +  ++ S   + +                         T  + I             
Sbjct: 231 VFDIINNVDSIYAKVIHFPYPKAGTTNSAVKVGYVSSTGGNTTWIAIPGDPRNNYLPRME 290

Query: 309 YSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLI 361
           + P+S ++ F    +  +   ++++ + + +    I  D +A++ D      W       
Sbjct: 291 FIPESDEL-FIQQLNRPQNTNKVWIAKISDNSLNNIFTDTDAAWLDTNDNIQWLKDNHYF 349

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-----SLIFSRKKDGDTGS 416
            +         +  + +DG + + + +         SP G       + F    D  T  
Sbjct: 350 TWESERSGWRHLYRISRDGKEIQPITKG---DFDYISPVGTDLQKGWVYFIASPDNFTQR 406

Query: 417 KLYSIDLNGRNETLINTPAYAS 438
            LY     G  E    +P   S
Sbjct: 407 YLYRAKAFGNGEVERVSPMEQS 428


>gi|219847349|ref|YP_002461782.1| WD-40 repeat-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219541608|gb|ACL23346.1| WD-40 repeat protein [Chloroflexus aggregans DSM 9485]
          Length = 351

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 74/212 (34%), Gaps = 29/212 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRA--PKRIGNFRSMIL-APRFSSNGKRALIS 275
           FSP+   +A A         V L D    R     RI +  S ++ A  F  +G+  ++S
Sbjct: 131 FSPDGFTLAIAEKHHSRGPEVQLWDVVHGRPIGTIRIVDPDSTVIKALAFHPDGQHLVVS 190

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-------ESDREGKEQL 328
                   ++ VD+      R       +   ++SP+ S++V          D      +
Sbjct: 191 SLWHG---LWLVDIHRQEVIRKIQDW-PSSHPAFSPNGSRLVLGLGKSVRAYDSTTWRIV 246

Query: 329 YVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKF--SGEKFAIGVMKK------- 378
           Y     G++ +   +  +  +      SP G  +A      S + F++            
Sbjct: 247 YEYTLAGTEPRLPERRLDKMFSQAVAISPDGQWLAMPTRLPSYDTFSLFSPNPPHTTLAI 306

Query: 379 ----DGSQERLL-VEDSNLQAPTWSPSGRSLI 405
               DG + RLL      +    +SP  + L+
Sbjct: 307 HRLADGKRARLLGGHAGRVTHLLFSPDNQWLV 338



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 62/206 (30%), Gaps = 31/206 (15%)

Query: 267 SNGKRAL-------ISVQKDEAMDIYSVDLQS--NATERLTNTLFI-NISASYSPDSSQI 316
            +G           I + K   +++Y VD  +   + +   +   I  +   +SPD   +
Sbjct: 79  PDGGYVAGDSTGRLIGIGKQGRVNLYRVDTGALIGSLDCWPSGEHIYPMELHFSPDGFTL 138

Query: 317 V-FESDREGKEQLYVMQSNGS---DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              E       ++ +            RI            + P G  +  +        
Sbjct: 139 AIAEKHHSRGPEVQLWDVVHGRPIGTIRIVDPDSTVIKALAFHPDGQHLVVSSLWHG--- 195

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF-----SRKKDGDTGSKLYSIDLNGRN 427
           + ++     +    ++D     P +SP+G  L+       R  D  T   +Y   L G  
Sbjct: 196 LWLVDIHRQEVIRKIQDWPSSHPAFSPNGSRLVLGLGKSVRAYDSTTWRIVYEYTLAGTE 255

Query: 428 ETLI---------NTPAYASDPQWVG 444
             L             A + D QW+ 
Sbjct: 256 PRLPERRLDKMFSQAVAISPDGQWLA 281



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 66/245 (26%), Gaps = 65/245 (26%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E +LWDV   + I   +     ++           I        G        V  S+  
Sbjct: 150 EVQLWDVVHGRPIGTIRIVDPDSTV----------IKALAFHPDGQH-----LVVSSLWH 194

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV---------AYATYDDEDIL 237
           G     L ++D        +   +D     P FSPN  ++         AY +     + 
Sbjct: 195 G-----LWLVDI--HRQEVIRKIQDWPSSHPAFSPNGSRLVLGLGKSVRAYDSTTWRIVY 247

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
              L  T      +R+    S   A   S +G+   +                     RL
Sbjct: 248 EYTLAGTEPRLPERRLDKMFSQ--AVAISPDGQWLAM-------------------PTRL 286

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                 +  + +SP+               L + +     + R+           ++SP 
Sbjct: 287 ---PSYDTFSLFSPNPPH----------TTLAIHRLADGKRARLLGGHAGRVTHLLFSPD 333

Query: 358 GDLIA 362
              + 
Sbjct: 334 NQWLV 338


>gi|75812377|ref|YP_319996.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75705133|gb|ABA24807.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 342

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 97/279 (34%), Gaps = 30/279 (10%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I     +  +   ++ +    +D   +R L+   D       +SP+      A+   +  
Sbjct: 19  IAVCGCTTQTPNTQDLIAQSPKDSQLVRTLSARSDSGYSV-AYSPSSVGTILASAGAK-- 75

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L +    +  + +           FS +G + L S  +D +++++  D+Q+    R
Sbjct: 76  -SIKLWNPNTGKLLRTLS---GQAFTVGFSPDG-QILASGSQDGSLNLW--DVQTGKLIR 128

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY------- 349
                   +   +SPD   +V  S+ +    + +      +  RI  D +A         
Sbjct: 129 TLQHSEPVLGVVFSPDGQTLV--SNLDLGSIIRLWNWRTGEIIRIKDDPDAYQKGFENFK 186

Query: 350 -FDPVWSPQGDLIAFTKFSGE---KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                +S  G  +  T  SG     + +   K+ GS E      S++ A   SP G +L 
Sbjct: 187 TQPATFSLDGQTLFATSGSGSLLQSWNLKTSKRTGSFE----AKSSINAVAISPDGNTLA 242

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              +   D   KL++I+      TL           +  
Sbjct: 243 TGIR---DNAIKLWNINDGKLIHTLTGHKGQVRTVAFSP 278



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 41/116 (35%), Gaps = 7/116 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A    D+     + L +    +    +   +  +    FS + +  L S  
Sbjct: 233 AISPDGNTLATGIRDN----AIKLWNINDGKLIHTLTGHKGQVRTVAFSPD-RTLLASGS 287

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            D  + +++           T       S +++PD   +   + ++G  +++ +  
Sbjct: 288 SDGTVKLWNA-TTGKEINTFTAHKEQVWSVAFNPDGKTLA-STGQDGSVKIWGVSP 341



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 7/110 (6%)

Query: 182 ESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            ++ +GI  N++ + +  DG  I  LT  + Q+     FSP++  +A  + D      V 
Sbjct: 239 NTLATGIRDNAIKLWNINDGKLIHTLTGHKGQVRTV-AFSPDRTLLASGSSDG----TVK 293

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           L +    +        +  + +  F+ +GK    S  +D ++ I+ V  Q
Sbjct: 294 LWNATTGKEINTFTAHKEQVWSVAFNPDGKTLA-STGQDGSVKIWGVSPQ 342


>gi|123427487|ref|XP_001307262.1| WD repeat protein [Trichomonas vaginalis G3]
 gi|121888881|gb|EAX94332.1| WD repeat protein, putative [Trichomonas vaginalis G3]
          Length = 309

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 75/210 (35%), Gaps = 18/210 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D+++F+  +SP+ + +A      E +L     +   +          ++I    +S +GK
Sbjct: 8   DKVVFDVDWSPDGRYLAIVGASRELVLLKIDDEDPFNVTEVFREQRPNIIRRVHWSPDGK 67

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDREGKE 326
           R + +   D    +Y  D        +   L+ N     SA +S     IV   +R+  +
Sbjct: 68  RLV-TAGFDGVAVLYEFDEDKQPVLEMIGNLYENDKELKSARWSHSGKYIVTC-NRD--K 123

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            ++V      +   I  + +    D ++SP    +    F G       M++ GS +   
Sbjct: 124 SIFVWDVEELEYIVIHTEHKGDVKDVMFSPDDSKLVSVSFDGTVKVWSSMEEYGSLQTFT 183

Query: 387 VEDSNLQAPTWSP----------SGRSLIF 406
                +    +             G+++ +
Sbjct: 184 HHTYTVWELAFDNENDEFVTIGEDGKAVHY 213



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 76/196 (38%), Gaps = 18/196 (9%)

Query: 193 LCVMDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           L + D D  N+  +    R  I+    +SP+ +++  A +D   +  +Y  D       +
Sbjct: 35  LKIDDEDPFNVTEVFREQRPNIIRRVHWSPDGKRLVTAGFD--GVAVLYEFDEDKQPVLE 92

Query: 252 RIGNFRSMI---LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINI 305
            IGN         + R+S +GK  + +  +D+++ ++ V+      E +   T       
Sbjct: 93  MIGNLYENDKELKSARWSHSGKYIV-TCNRDKSIFVWDVE----ELEYIVIHTEHKGDVK 147

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              +SPD S++V  S  +G  +++         +  +      +         +   F  
Sbjct: 148 DVMFSPDDSKLVSVSF-DGTVKVWSSMEEYGSLQTFTHHTYTVWELAF---DNENDEFVT 203

Query: 366 FSGEKFAIGVMKKDGS 381
              +  A+  +++DG 
Sbjct: 204 IGEDGKAVHYIEEDGK 219



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 12/81 (14%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------TWSPSGRS 403
           FD  WSP G  +A     G    + ++K D      + E    Q P       WSP G+ 
Sbjct: 12  FDVDWSPDGRYLAIV---GASRELVLLKIDDEDPFNVTEVFREQRPNIIRRVHWSPDGKR 68

Query: 404 LIFSRKKDGDTGSKLYSIDLN 424
           L+       D  + LY  D +
Sbjct: 69  LV---TAGFDGVAVLYEFDED 86


>gi|302344494|ref|YP_003809023.1| hypothetical protein Deba_3076 [Desulfarculus baarsii DSM 2075]
 gi|301641107|gb|ADK86429.1| WD40 domain protein beta Propeller [Desulfarculus baarsii DSM 2075]
          Length = 342

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 55/127 (43%), Gaps = 17/127 (13%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-------ESDRE 323
           R + S  +    ++Y + L      RLT+   ++    +SPD  ++VF        S+R+
Sbjct: 67  RVVWSSSRSGNHELYMLRLPVGEIIRLTDNDHVDFFPRFSPDGKRLVFARSQKQWVSERD 126

Query: 324 GKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             +  +++M  N  +Q  +++        P+W    D+++F + +     + V       
Sbjct: 127 YNQWDVWLMDLNTGEQTMLARAGN----FPLWV-DEDVVSFMRGN----KVVVKSVGTGT 177

Query: 383 ERLLVED 389
           ER++ + 
Sbjct: 178 ERVIYDG 184



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 89/279 (31%), Gaps = 42/279 (15%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP----------SRDQ 212
           Y  +  + GD +   +        G+    +    R G +  Y+              D 
Sbjct: 39  YLWLRPQDGDLDQAAMAELNQKTDGLKCRVVWSSSRSGNHELYMLRLPVGEIIRLTDNDH 98

Query: 213 ILFEPRFSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAP--KRIGNFRSMILAP 263
           + F PRFSP+ +++ +        +  D +   V+LMD          R GNF   +   
Sbjct: 99  VDFFPRFSPDGKRLVFARSQKQWVSERDYNQWDVWLMDLNTGEQTMLARAGNFPLWVDED 158

Query: 264 RFSS-NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             S   G + ++         +   D              + ++   SP  + ++  + R
Sbjct: 159 VVSFMRGNKVVVKSVGTGTERV-IYDGDGPPV------GGVIVTPMLSPAQANLLALTAR 211

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDP---VWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                  V           + DK  ++ D    +++P G  + + +  G      +    
Sbjct: 212 GAARGCLVFDPR-------TPDKAVNFGDGCKLIFTPDGKGLIWVENGGNGGNRLMTSPV 264

Query: 380 GSQERLLVED-----SNLQAPTWSPSGRSLIFSRKKDGD 413
           G     +  D     S+   P  S  GR L+++    G 
Sbjct: 265 GRVAPTVFMDLPGDFSHEYFPKLSADGRWLVWAASAGGH 303



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 9/91 (9%)

Query: 360 LIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD------G 412
            + ++        + +++   G   RL   D     P +SP G+ L+F+R +        
Sbjct: 67  RVVWSSSRSGNHELYMLRLPVGEIIRLTDNDHVDFFPRFSPDGKRLVFARSQKQWVSERD 126

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
                ++ +DLN   +T++        P WV
Sbjct: 127 YNQWDVWLMDLNTGEQTMLARAGN--FPLWV 155


>gi|225450034|ref|XP_002276009.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 477

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 78/197 (39%), Gaps = 28/197 (14%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM-DR 198
            GK++  SP   +++A        +     KG+   R++       SG    ++ +    
Sbjct: 307 TGKQYT-SPEEMKEVA-------LERYKKMKGNAPERLV-------SGSDDFTMFLWEPA 351

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  + +       Q++    FSP+ Q VA A++D      V L +    +          
Sbjct: 352 DSKHPKTRMTGHQQLVNHVYFSPDGQWVASASFDK----SVKLWNGTTGKFVAAFRGHVG 407

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIV 317
            +    +S++  R L+S  KD  + ++  D++++  ++ L        +  +SPD  ++ 
Sbjct: 408 PVYQISWSAD-SRLLLSGSKDSTLKVW--DIRTHKLKQDLPGHEDEVFAVDWSPDGEKVA 464

Query: 318 FESDREGKEQLYVMQSN 334
                 G++++  +   
Sbjct: 465 ----SGGRDRVLKLWMG 477



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 15/128 (11%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + +    FSP+ +++A  + D      V L D             ++ +L   +S +
Sbjct: 110 GHTEAVLSVAFSPDGRQLASGSGDT----TVRLWDLNTQTPMYTCTGHKNWVLCIAWSPD 165

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSP-----DSSQIVFESD 321
           GK  + S  K   +  +  D Q+       L          S+ P        + V  S 
Sbjct: 166 GKHLV-SGSKAGELQCW--DPQTGKPSGNPLIGHKKWITGISWEPVHLRAPCRRFV-SSS 221

Query: 322 REGKEQLY 329
           ++G  +++
Sbjct: 222 KDGDARIW 229



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 9/146 (6%)

Query: 232 DDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L +    + PK R+   + ++    FS +G+    S   D+++ ++  +  
Sbjct: 338 SGSDDFTMFLWEPADSKHPKTRMTGHQQLVNHVYFSPDGQWVA-SASFDKSVKLW--NGT 394

Query: 291 SNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +          +      S+S DS  ++  S       L V        K+     E   
Sbjct: 395 TGKFVAAFRGHVGPVYQISWSADSRLLLSGSK---DSTLKVWDIRTHKLKQDLPGHEDEV 451

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGV 375
           F   WSP G+ +A +        + +
Sbjct: 452 FAVDWSPDGEKVA-SGGRDRVLKLWM 476



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 42/151 (27%), Gaps = 13/151 (8%)

Query: 273 LISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           L+S   D  M ++     S     R+T    +     +SPD   +   S     + + + 
Sbjct: 336 LVSGSDDFTMFLWE-PADSKHPKTRMTGHQQLVNHVYFSPDGQWVASASF---DKSVKLW 391

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                      +      +   WS    L+           + V      + +  +    
Sbjct: 392 NGTTGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDST---LKVWDIRTHKLKQDLPGHE 448

Query: 392 LQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
            +     WSP G  +        D   KL+ 
Sbjct: 449 DEVFAVDWSPDGEKVA---SGGRDRVLKLWM 476



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 3/84 (3%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           I+R    I      +L+  FS +G++   S   D  + ++ ++ Q+      T      +
Sbjct: 101 INRCSSTIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT-PMYTCTGHKNWVL 158

Query: 306 SASYSPDSSQIVFESDREGKEQLY 329
             ++SPD   +V  S + G+ Q +
Sbjct: 159 CIAWSPDGKHLVSGS-KAGELQCW 181



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 78/260 (30%), Gaps = 42/260 (16%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D +     Y        +    +SP+ + +            +   D +
Sbjct: 129 SGSGDTTVRLWDLNTQTPMYTCTGHKNWVLCIAWSPDGKHLV----SGSKAGELQCWDPQ 184

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRA----LISVQKDEAMDIYSVDLQ------SNAT 294
             +     +   +  I    +     RA     +S  KD    I+ V L+      S  T
Sbjct: 185 TGKPSGNPLIGHKKWITGISWEPVHLRAPCRRFVSSSKDGDARIWDVSLRKCVICLSGHT 244

Query: 295 ERLTNTLFINISASY--SPDSSQIVFESDRE-------GKEQLYVMQSNGSDQKRISQDK 345
             +T   +      Y  S D +  V+E+ +        G    +V     S +  +    
Sbjct: 245 LAVTCVKWGGDGVIYTGSQDCTIKVWETSQGKLIRELKGHGH-WVNSLALSTEYVLRTGA 303

Query: 346 EASYFDPVWSPQG-DLIAFTKF-------------SGEKFAIGVMKKDGSQE---RLLVE 388
                    SP+    +A  ++               + F + + +   S+    R+   
Sbjct: 304 FDHTGKQYTSPEEMKEVALERYKKMKGNAPERLVSGSDDFTMFLWEPADSKHPKTRMTGH 363

Query: 389 DSNLQAPTWSPSGRSLIFSR 408
              +    +SP G+ +  + 
Sbjct: 364 QQLVNHVYFSPDGQWVASAS 383



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 17/124 (13%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD  Q+   S   G   + +   N           +       WSP G  +     +
Sbjct: 119 AFSPDGRQLASGS---GDTTVRLWDLNTQTPMYTCTGHKNWVLCIAWSPDGKHLVSGSKA 175

Query: 368 GEK--FAIGVMKKDGSQERLLVEDSNLQAPTW------SPSGRSLIFSRKKDGDTGSKLY 419
           GE   +     K  G+   L+     +   +W      +P  R +  S  KDGD  ++++
Sbjct: 176 GELQCWDPQTGKPSGNP--LIGHKKWITGISWEPVHLRAPCRRFV--SSSKDGD--ARIW 229

Query: 420 SIDL 423
            + L
Sbjct: 230 DVSL 233


>gi|238783410|ref|ZP_04627433.1| Oligogalacturonide lyase [Yersinia bercovieri ATCC 43970]
 gi|238715655|gb|EEQ07644.1| Oligogalacturonide lyase [Yersinia bercovieri ATCC 43970]
          Length = 388

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 30/182 (16%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 ++   + +++ DG+N+R + T +  +      + P+   + Y +Y      R  
Sbjct: 207 HEGPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKSSPDRFI 266

Query: 241 LMDTRIDRAPKRIGNFR------SMILAPRFSSNGKRALISVQKDEAMDI------YSVD 288
                     +++          S         +G  A + VQ D    I      Y  +
Sbjct: 267 YSANPETLENRQLTKMPACSHLMSNYDGSLLVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326

Query: 289 LQSNATERLTNTLFINIS--------------ASYSPDSSQIVFESDREGKEQLYVMQSN 334
           L++ +  R+      + S               S++PD  QI+F SD  GK  LY++   
Sbjct: 327 LKNGSQHRVARH---DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLVTLP 383

Query: 335 GS 336
            S
Sbjct: 384 ES 385



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/236 (10%), Positives = 71/236 (30%), Gaps = 35/236 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           + P      +  +         +           I      +  P +   +        +
Sbjct: 149 WQPLTDWKKFHEFYFTKPCCRLMRVDLQTGESAVILQENQWLGHPIYRPYDDNTVAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ ++   +   ++ T+    +     + PD S +V+ S  +      +Y 
Sbjct: 209 GPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKSSPDRFIYS 268

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMK 377
                 + +++++    S+    +   G L+                + I       V  
Sbjct: 269 ANPETLENRQLTKMPACSHLMSNY--DGSLLVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326

Query: 378 K-DGSQERLLVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +GSQ R+   D++ +            P+++P  + ++F+    G     L ++
Sbjct: 327 LKNGSQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLVTL 382



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 73/213 (34%), Gaps = 28/213 (13%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           P  +   R+      F+ +G + L     D   + Y +DL +    +LT     N    +
Sbjct: 28  PPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGF 87

Query: 310 -SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-----QDKEASYFDPV---------- 353
            SP+   + +  +      L  +  +  ++  +           ++              
Sbjct: 88  LSPEDDALFYVKE---GRNLMRVSLDTLEESVVYQVPEEWVGYGTWVANSDCTKLVGIEI 144

Query: 354 ----WSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSP-SGRSLI 405
               W P  D   F +F   K    +M+ D   G    +L E+  L  P + P    ++ 
Sbjct: 145 KREDWQPLTDWKKFHEFYFTKPCCRLMRVDLQTGESAVILQENQWLGHPIYRPYDDNTVA 204

Query: 406 FSRKKDGDT-GSKLYSIDLNGRNETLINTPAYA 437
           F  +   D   ++++ I+ +G N   + T A  
Sbjct: 205 FCHEGPHDLVDARMWLINEDGSNMRKVKTHAEG 237



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 94/315 (29%), Gaps = 51/315 (16%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +D         +    +P       H   +  YQ      G   S++LF      +    
Sbjct: 11  FDTYQDASTGAQVTRLTPPDV--TCHR--NYFYQKCFTRDG---SKLLF----GGAFDGP 59

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +  ++D +      LT  R    F    SP    + Y   +  +++RV L         
Sbjct: 60  WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPEDDALFYVK-EGRNLMRVSLDTLEESVVY 118

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +    +            G          +   +  ++++    + LT+           
Sbjct: 119 QVPEEWVGY---------GTWVA----NSDCTKLVGIEIKREDWQPLTDWK--------- 156

Query: 311 PDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFS 367
               +  F      K   +L  +     +   I Q+ +     P++ P   + +AF    
Sbjct: 157 -KFHEFYFT-----KPCCRLMRVDLQTGESAVILQENQW-LGHPIYRPYDDNTVAFCHEG 209

Query: 368 GEKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   + ++ +DGS  R +    E  +     W P G +L++           +YS 
Sbjct: 210 PHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKSSPDRFIYSA 269

Query: 422 DLNG-RNETLINTPA 435
           +     N  L   PA
Sbjct: 270 NPETLENRQLTKMPA 284


>gi|307326377|ref|ZP_07605573.1| WD40 repeat, subgroup [Streptomyces violaceusniger Tu 4113]
 gi|306888040|gb|EFN19030.1| WD40 repeat, subgroup [Streptomyces violaceusniger Tu 4113]
          Length = 467

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 53/274 (19%), Positives = 93/274 (33%), Gaps = 36/274 (13%)

Query: 128 FRLWDVKDRKQ---------IIGKKFFSSPASWRKIA--HTISDDIYQSIT-GEKG---- 171
            RLWDV  RKQ         ++ K    SP   R +A  H      + + T   +G    
Sbjct: 200 LRLWDVATRKQRAKALLSSLVVFKGVAFSPDG-RTVATGHESRAQFWDATTLRPRGKEIA 258

Query: 172 -------DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQ 223
                   F +       ++ +        +   D A  R   TP   +   +  FSP+ 
Sbjct: 259 KHEDPFLSFETIAFSPDGTIFATSGFIDQEIRFYDAATHRQKATPLESKGADKLVFSPDG 318

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +A       D +R++ + TR  R PK   +F        FS +     ++   ++   
Sbjct: 319 KTLAGVDESGMDGVRLWDVATRTQR-PKPPNDFFGGSNHMAFSPDSTTLAVAGSSNDVRF 377

Query: 284 IYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR- 340
               D  +       L + +      +Y+ D    V  +D  G   L+V  +    ++  
Sbjct: 378 F---DPLTGKERGGPLDSHVGSVTGLAYATDGKS-VLTADYSG---LHVWDAATRKRRAT 430

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           IS     S     +SP G  +A   F  +   + 
Sbjct: 431 ISVPGATSIAQLAFSPDGRTLATLGFQDKTIHLW 464



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 71/179 (39%), Gaps = 10/179 (5%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             R  I   RFS +GK    S   D  + ++ V  +    + L ++L +    ++SPD  
Sbjct: 173 GHRGDIGTLRFSPDGKTLASSEAHDGVLRLWDVATRKQRAKALLSSLVVFKGVAFSPDGR 232

Query: 315 QIVFESDREGKEQLY---VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            +   +  E + Q +    ++  G +  +  +D   S+    +SP G + A + F  ++ 
Sbjct: 233 TVA--TGHESRAQFWDATTLRPRGKEIAK-HEDPFLSFETIAFSPDGTIFATSGFIDQEI 289

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                     +   L      +   +SP G++L     + G  G +L+  D+  R +  
Sbjct: 290 RFYDAATHRQKATPLESKGADKL-VFSPDGKTLA-GVDESGMDGVRLW--DVATRTQRP 344


>gi|295112112|emb|CBL28862.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Synergistetes
           bacterium SGP1]
          Length = 651

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 78/217 (35%), Gaps = 46/217 (21%)

Query: 262 APRFSSNGKRALISVQKDEA------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           AP FS +G +    V + +A       DI+ + L S    RLT++        +S D + 
Sbjct: 18  APTFSPDGGKIAFKVSRADAESNGYIKDIWLLSLPSGEARRLTSSGCEECF-CWSEDGAS 76

Query: 316 IVFESDR-------EGK--EQLYVMQSNGSDQKRISQDKE----------------ASYF 350
           IVF S R       EGK   + Y +  +G +   + +                   A++ 
Sbjct: 77  IVFASKRPSAADREEGKAVTRFYSIGIDGGEATPLFEVPHAVSAIRALKAGRYLLTANFD 136

Query: 351 DPVWSP-QGDLIAFTKF----SGEKF------AIGVMKKDGSQERLLVEDSNLQAPTWSP 399
               +P   D + F +     +G+ +       +      G   RL     ++     S 
Sbjct: 137 PVHDNPEDADFMIFEQVPFMANGKGYIGQRRVGLAACDASGKLSRLTPPTMDVARVELSA 196

Query: 400 SG-RSLIFSRKKDG--DTGSKLYSIDLNGRNETLINT 433
            G R+L+ +          + +Y +DL+     L++ 
Sbjct: 197 DGDRALVVACDYKDVKPLENSVYVLDLSTGALRLLSG 233



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 81/272 (29%), Gaps = 56/272 (20%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP----KRIGNFRSMILAPRFSS 267
           + L  P FSP+  K+A+     +     Y+ D  +   P    +R+ +         +S 
Sbjct: 14  RFLAAPTFSPDGGKIAFKVSRADAESNGYIKDIWLLSLPSGEARRLTSS-GCEECFCWSE 72

Query: 268 NGKRALISVQKDEAMD---------IYSVDLQSNATERLTNTLFINI------------S 306
           +G   + + ++  A D          YS+ +       L                    +
Sbjct: 73  DGASIVFASKRPSAADREEGKAVTRFYSIGIDGGEATPLFEVPHAVSAIRALKAGRYLLT 132

Query: 307 ASYSP------DSSQIVFES---DREGKEQLYVMQSN------GSDQKRISQDKEASYFD 351
           A++ P      D+  ++FE       GK  +   +             R++         
Sbjct: 133 ANFDPVHDNPEDADFMIFEQVPFMANGKGYIGQRRVGLAACDASGKLSRLTPPT-MDVAR 191

Query: 352 PVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSL 404
              S  GD         +        + V+       RLL        +   WS  G S+
Sbjct: 192 VELSADGDRALVVACDYKDVKPLENSVYVLDLSTGALRLLSGTLPFTFKCAVWS--GESI 249

Query: 405 IFSRKKDGDTG----SKLYSIDLNGRNETLIN 432
           + +       G     K++ ++ +G    L  
Sbjct: 250 VLTATDHKAMGVNENPKIWLLE-DGEMRCLTP 280


>gi|91213212|ref|YP_543198.1| hypothetical protein UTI89_C4240 [Escherichia coli UTI89]
 gi|91074786|gb|ABE09667.1| hypothetical protein YidR [Escherichia coli UTI89]
          Length = 416

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 73/203 (35%), Gaps = 41/203 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA----LISVQKDEAMDIYS--VDLQSNAT-----------E 295
           +GN     +    S  G++     ++ + KDEA    +  V L    T            
Sbjct: 223 VGNHALAFIGDTLSPKGEKVPELFIVELPKDEAGWKAAGDVPLSGTETTLPAPPRGVVQR 282

Query: 296 RLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT T        +NI   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 283 RLTFTHHRIYPGLVNIPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 342

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I        +   L E      +  A  +SP G
Sbjct: 343 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDG 398

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN 424
           + L +          +L+  + +
Sbjct: 399 QWLAWMED------GQLWITETD 415



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 12/177 (6%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFS 220
           I +    E G   +  + +S +  +        V  R       + P    I     R +
Sbjct: 247 IVELPKDEAGWKAAGDVPLSGTETTLPAPPRGVVQRRLTFTHHRIYPGLVNIPRHWVRCN 306

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     +    
Sbjct: 307 PQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN-- 364

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
              I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 365 --RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 415


>gi|78046198|ref|YP_362373.1| putative dipeptidyl peptidase IV [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78034628|emb|CAJ22273.1| putative dipeptidyl peptidase IV [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 860

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 51/354 (14%), Positives = 103/354 (29%), Gaps = 80/354 (22%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD----------RDG-ANI 203
           A      +Y     E G     +L   +   + I   +L + D          RDG  N 
Sbjct: 227 ARARCSKLYAKDKPEPG-----VLSPDKRSEAFIRDWNLWIRDLASGQETQLTRDGVENF 281

Query: 204 RYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-------- 252
            Y T +      +     +SP+ +K+A    D      +YL+ T++     +        
Sbjct: 282 GYATDNAGWQHTDNAILAWSPDSRKIATFQQDQRKTGDMYLVSTKLGHPELQAWKYPLAG 341

Query: 253 ------------------------------------IGNFRSMILAPRFSSNGKRALI-- 274
                                               +     +    +++ + K      
Sbjct: 342 DKDVTMIERVIIDVPTGSVLRLKTPPDQHRSTLCDDVSCSPGLWDDVKWAPDSKTLAFAS 401

Query: 275 SVQKDEAMDIYSVDLQSNATE------RLTNTLFINISASYS--PDSSQIVFESDREGKE 326
           + +  +   +   D  + A          T      ++A+++  P S++ V+ S+R    
Sbjct: 402 TSRFHKQTWLRIADASTGAVRTAFDETVKTYYESGQVAANWAYLPASNEAVWFSERSDWG 461

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKD 379
           QLY+        KR     E +  + +        A+    G           +  +  D
Sbjct: 462 QLYLYDLATGKPKRAITTGEGNVTELLRVDPVTRTAWLVGVGRSAGVDPYYQQLWKVSLD 521

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G +  LL  +    +   SP G   + +          L     +GR  + + T
Sbjct: 522 GGEPVLLTPEPANHSIALSPDGARFVDTYSTSVTPPVTLLREAGDGRTVSTLAT 575


>gi|325269260|ref|ZP_08135878.1| dipeptidyl-peptidase IV [Prevotella multiformis DSM 16608]
 gi|324988387|gb|EGC20352.1| dipeptidyl-peptidase IV [Prevotella multiformis DSM 16608]
          Length = 735

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 46/145 (31%), Gaps = 24/145 (16%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S D  Q+V  S R GK    +   +      +    +        S  G  +     +  
Sbjct: 60  SADGRQVVKFSFRTGKPTGVIFDLSDVKDGPLKFFDDY-----QISADGCRLLLQTNTNR 114

Query: 370 KFA------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +         + +    Q + L +D   Q P +SP GR + +  K      + +Y  D 
Sbjct: 115 IYRRSFTADFYLYEVKTKQLKKLSKDGAEQIPVFSPDGRQIAYVHK------NNIYITD- 167

Query: 424 NGRNETLINTPAYASD-----PQWV 443
            G N   +      +      P WV
Sbjct: 168 -GENVRQVTADGAFNKVINGLPDWV 191



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 55/350 (15%), Positives = 98/350 (28%), Gaps = 97/350 (27%)

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           V F L DVKD        +  S    R +  T ++ IY+              F    V 
Sbjct: 79  VIFDLSDVKDGPLKFFDDYQISADGCRLLLQTNTNRIYRRSFTAD--------FYLYEVK 130

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +  +K                  S+D     P FSP+ +++AY   ++     +Y+ D  
Sbjct: 131 TKQLKKL----------------SKDGAEQIPVFSPDGRQIAYVHKNN-----IYITDGE 169

Query: 246 IDRAPKRIGNFR---------------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             R     G F                    A  +S++ K    S  + +   + +  LQ
Sbjct: 170 NVRQVTADGAFNKVINGLPDWVNEEEFGFNNALAWSADSKTL--SWIRYDESKVKTYSLQ 227

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL-YVMQSNGSDQKRIS------Q 343
                             +    S   F        +  Y     G D  ++S       
Sbjct: 228 -----------------FF--KGSHPAFNKYETYPGEYSYKYPKAGEDNSQVSAWAYSLS 268

Query: 344 DKEASYFDPVWSPQG------------DLIAFT-KFSGEKFAIGVMKKDGSQERLL---- 386
           D     +D   +  G             +I +T     ++  +          RLL    
Sbjct: 269 DGSVRKYDLPLAADGYIPRIKTTADADRIILYTMNRHQDELNLYAANPKTGACRLLIRER 328

Query: 387 ----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
               V++  ++          ++    +DG     LY     G+    I+
Sbjct: 329 VPKYVKEEAMEGIRIMKD--YILLPSDRDGYM--HLYLYSKEGKLLRQID 374


>gi|149369848|ref|ZP_01889699.1| tolB protein [unidentified eubacterium SCB49]
 gi|149356339|gb|EDM44895.1| tolB protein [unidentified eubacterium SCB49]
          Length = 496

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 78/230 (33%), Gaps = 32/230 (13%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            +  T  +    R+ +       PR +S  K+          + I+++D   N   ++TN
Sbjct: 227 VIFSTDEEGNELRLTDLDVNSFRPRRNSITKKIAFLRTIGGNVHIFTMDEDGNNQTQITN 286

Query: 300 T------LFINISASYSPDSS---QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY- 349
           +       F  +  ++SP         F        +LY +  NG+    + +    ++ 
Sbjct: 287 SQPVQGFSFDELDYTWSPQGDFLLYPAFT-------KLYRIAENGTGLTTLYETTNGNFV 339

Query: 350 FDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
            +  WS   D+IA    + E +   I  +   G  + +++            +  G  L+
Sbjct: 340 TNVDWSRFNDVIAVKTNNSEGYNVEIFTVNTAGDVQDVILSGVPGGAGGVNLNVDGTQLL 399

Query: 406 FSRKKDGDTGSK---------LYSIDLNGRNE--TLINTPAYASDPQWVG 444
           +     G              +Y+I  N   E  T + T     DP++  
Sbjct: 400 YYYDTSGSELPNYSLQDARMFIYNILANTSVELATEVETGYLNIDPRFSP 449



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 57/142 (40%), Gaps = 18/142 (12%)

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           I+F  +  G   ++     G++  R++ D + + F P  +     IAF +  G    I  
Sbjct: 216 ILFVKEINGNNVIFSTDEEGNEL-RLT-DLDVNSFRPRRNSITKKIAFLRTIGGNVHIFT 273

Query: 376 MKKDGSQERLLVE-------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           M +DG+ +  +           +    TWSP G  L++         +KLY I  NG   
Sbjct: 274 MDEDGNNQTQITNSQPVQGFSFDELDYTWSPQGDFLLY------PAFTKLYRIAENGTGL 327

Query: 429 TLI--NTPA-YASDPQWVGFMD 447
           T +   T   + ++  W  F D
Sbjct: 328 TTLYETTNGNFVTNVDWSRFND 349



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/270 (14%), Positives = 87/270 (32%), Gaps = 41/270 (15%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR-----D 211
            ++D    S    +     +I F+     +      +  MD DG N   +T S+      
Sbjct: 239 RLTDLDVNSFRPRRNSITKKIAFLRTIGGNVH----IFTMDEDGNNQTQITNSQPVQGFS 294

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
               +  +SP    + Y  +    + R+    T +    +      + +    +S     
Sbjct: 295 FDELDYTWSPQGDFLLYPAFT--KLYRIAENGTGLTTLYE--TTNGNFVTNVDWSRFNDV 350

Query: 272 ALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKE-- 326
             +     E  ++    + +    +   L+         + + D +Q+++  D  G E  
Sbjct: 351 IAVKTNNSEGYNVEIFTVNTAGDVQDVILSGVPGGAGGVNLNVDGTQLLYYYDTSGSELP 410

Query: 327 -------QLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFA----I 373
                  ++++     +    ++ + E  Y +  P +SP  D + +T   G  F     +
Sbjct: 411 NYSLQDARMFIYNILANTSVELATEVETGYLNIDPRFSPNEDKVIYTH-KGRGFNEPSQV 469

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
            V             D N+     +P G+ 
Sbjct: 470 YVHD---------FNDDNVGFEVIAPEGKM 490


>gi|285019760|ref|YP_003377471.1| dipeptidyl peptidase iv precursor [Xanthomonas albilineans GPE
           PC73]
 gi|283474978|emb|CBA17477.1| putative dipeptidyl peptidase iv precursor protein [Xanthomonas
           albilineans]
          Length = 743

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 62/193 (32%), Gaps = 54/193 (27%)

Query: 263 PRFSSNGKRALISVQKDEA---MDIYSVDLQSNATE------------------------ 295
           P+ + +G R      KD     +D++  D+ S  T                         
Sbjct: 43  PKVAPDGSRVTFLRGKDSNRNQLDLWEYDIASGQTRLLVDSKLVLPGAETLSDEEKARRE 102

Query: 296 --RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             R+     I +   ++PD+  ++F     G+  LY +   GS   R     E    DP 
Sbjct: 103 RQRIAAYTGI-VEYQWAPDARALLFPL--GGELYLYDLSKTGSAAVRKLTHGEGFATDPR 159

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQAP 395
            SP+G  ++F +       + V+     Q+  L  D                        
Sbjct: 160 ISPKGGYVSFVRGR----NLWVIDLASGQQYPLTHDGSQTIGNGVAEFVADEEMDRHTGY 215

Query: 396 TWSPSGRSLIFSR 408
            W+P   ++ F+R
Sbjct: 216 WWAPDDSAVAFAR 228



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 65/204 (31%), Gaps = 55/204 (26%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----------------------- 246
               L +P+ +P+  +V +    D +  ++ L +  I                       
Sbjct: 36  SGPTLMKPKVAPDGSRVTFLRGKDSNRNQLDLWEYDIASGQTRLLVDSKLVLPGAETLSD 95

Query: 247 ----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTN 299
                R  +RI  +  ++   +++ + +  L  +      ++Y  DL    S A  +LT+
Sbjct: 96  EEKARRERQRIAAYTGIVEY-QWAPDARALLFPL----GGELYLYDLSKTGSAAVRKLTH 150

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV------ 353
                     SP    + F   R     L+V+      Q  ++ D   +  + V      
Sbjct: 151 GEGFATDPRISPKGGYVSFVRGR----NLWVIDLASGQQYPLTHDGSQTIGNGVAEFVAD 206

Query: 354 ----------WSPQGDLIAFTKFS 367
                     W+P    +AF +  
Sbjct: 207 EEMDRHTGYWWAPDDSAVAFARID 230



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/318 (11%), Positives = 86/318 (27%), Gaps = 110/318 (34%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+ + + +        L +Y +      A +++ +       PR S  G         
Sbjct: 117 WAPDARALLFP---LGGELYLYDLSKTGSAAVRKLTHGEGFATDPRISPKGGYVSFV--- 170

Query: 279 DEAMDIYSVDLQSNATERLTNTLF-----------------INISASYSPDSSQIVFES- 320
               +++ +DL S     LT+                     +    ++PD S + F   
Sbjct: 171 -RGRNLWVIDLASGQQYPLTHDGSQTIGNGVAEFVADEEMDRHTGYWWAPDDSAVAFARI 229

Query: 321 ---------------------------------------------------DREGKEQLY 329
                                                              D      +Y
Sbjct: 230 DETDVPVQKRQEVYADHSDVVEQRYPQAGQPNVKIKLGVIAPHAGAQPQWIDLGKNPDIY 289

Query: 330 VMQSNGSDQKRISQDKEASY----------------------FDPVWSP---------QG 358
           + + +  D +R++  +++                            W P          G
Sbjct: 290 LARVDWRDPQRLTFQRQSRDQKRLELIETTLANGKQRVLVTETSKTWVPLTNDLHFLKDG 349

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR--SLIFSRKKDGDTGS 416
             +  ++ SG +  + +  +DG     L +   +     +       + FS  K+  T +
Sbjct: 350 RFVWGSERSGYE-HLYLASEDGRTLHPLTQGEWVVDALLAVDENAGKVYFSGTKESPTQA 408

Query: 417 KLYSIDLNGRNETLINTP 434
            +Y++ L G     ++ P
Sbjct: 409 NVYAVPLAGGAIERLSQP 426



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 46/353 (13%), Positives = 102/353 (28%), Gaps = 62/353 (17%)

Query: 121 KDRLRVEFRLWDVKDRKQ---------IIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
            +R +++   +D+   +          + G +  S     R+    I+   Y  I   + 
Sbjct: 60  SNRNQLDLWEYDIASGQTRLLVDSKLVLPGAETLSDEEKARRERQRIA--AYTGIVEYQW 117

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT- 230
             ++R L           +  L  + + G+         +    +PR SP    V++   
Sbjct: 118 APDARALLFPLGG-----ELYLYDLSKTGSAAVRKLTHGEGFATDPRISPKGGYVSFVRG 172

Query: 231 -----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-----FSSNGKRALISVQKD- 279
                 D     +  L           +  F +     R     ++ +      +   + 
Sbjct: 173 RNLWVIDLASGQQYPLTHDGSQTIGNGVAEFVADEEMDRHTGYWWAPDDSAVAFARIDET 232

Query: 280 ----EAMDIYSVDLQSNATERLTNTLFINIS---ASYSPD-SSQIVFESDREGKEQLYVM 331
               +       D      +R       N+       +P   +Q  +  D      +Y+ 
Sbjct: 233 DVPVQKRQEVYADHSDVVEQRYPQAGQPNVKIKLGVIAPHAGAQPQWI-DLGKNPDIYLA 291

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           + +  D +R++  ++        S     +           I     +G Q  L+ E S 
Sbjct: 292 RVDWRDPQRLTFQRQ--------SRDQKRLEL---------IETTLANGKQRVLVTETSK 334

Query: 392 LQAP-----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
              P      +   GR + +  ++ G     LY    +GR    +    +  D
Sbjct: 335 TWVPLTNDLHFLKDGRFV-WGSERSG--YEHLYLASEDGRTLHPLTQGEWVVD 384


>gi|218560764|ref|YP_002393677.1| hypothetical protein ECS88_4112 [Escherichia coli S88]
 gi|218367533|emb|CAR05318.1| conserved hypothetical protein [Escherichia coli S88]
 gi|307628765|gb|ADN73069.1| hypothetical protein UM146_18635 [Escherichia coli UM146]
 gi|323955017|gb|EGB50795.1| hypothetical protein ERLG_03735 [Escherichia coli H263]
          Length = 404

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 73/203 (35%), Gaps = 41/203 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA----LISVQKDEAMDIYS--VDLQSNAT-----------E 295
           +GN     +    S  G++     ++ + KDEA    +  V L    T            
Sbjct: 211 VGNHALAFIGDTLSPKGEKVPELFIVELPKDEAGWKAAGDVPLSGTETTLPAPPRGVVQR 270

Query: 296 RLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT T        +NI   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 271 RLTFTHHRIYPGLVNIPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 330

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I        +   L E      +  A  +SP G
Sbjct: 331 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDG 386

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN 424
           + L +          +L+  + +
Sbjct: 387 QWLAWMED------GQLWITETD 403



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 12/177 (6%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFS 220
           I +    E G   +  + +S +  +        V  R       + P    I     R +
Sbjct: 235 IVELPKDEAGWKAAGDVPLSGTETTLPAPPRGVVQRRLTFTHHRIYPGLVNIPRHWVRCN 294

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     +    
Sbjct: 295 PQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
              I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 353 --RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 403


>gi|315022213|gb|EFT35241.1| Prolyl oligopeptidase family protein [Riemerella anatipestifer
           RA-YM]
          Length = 661

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 87/245 (35%), Gaps = 41/245 (16%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN +K+AY+    E ++   L   + +  P    +  S +    +            + 
Sbjct: 121 SPNGKKIAYS---KEVLVEKVLGKEKYNDVPNTTAHIYSDLNHRHWD--------YFNQG 169

Query: 280 EAMDIYSVDLQ-SNATERLTNTLFINISA----------SYSPDSSQIVFE--------S 320
               I+ +DL  +++ + L      + S            +SPDSSQ++F          
Sbjct: 170 RYNHIFVIDLDKNSSPKDLLEGKKWD-SPQRPFGGAEDFVFSPDSSQLLFVMKPLEGAEY 228

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGV 375
            +     ++    +    K +++  +     P +SP G+ + +   + + +      + +
Sbjct: 229 AKSTNTDIFSYHFDSETIKNLTEANKGYDVSPKFSPDGNYLTWLSMARDGYEADKNDLKI 288

Query: 376 MKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           M         L +D +        WS + + L F+    G    +L+SI    +  T I 
Sbjct: 289 MDWKTGVITNLTKDWDESITGDFFWSQNNQLLYFTAAYRGTK--QLFSISPKSKKVTKIT 346

Query: 433 TPAYA 437
              + 
Sbjct: 347 EGTFD 351



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 59/174 (33%), Gaps = 7/174 (4%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD------EDILRVYL 241
                +     D   I+ LT +       P+FSP+   + + +         ++ L++  
Sbjct: 231 STNTDIFSYHFDSETIKNLTEANKGYDVSPKFSPDGNYLTWLSMARDGYEADKNDLKIMD 290

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             T +     +     S+     +S N +    +        ++S+  +S    ++T   
Sbjct: 291 WKTGVITNLTK-DWDESITGDFFWSQNNQLLYFTAAYRGTKQLFSISPKSKKVTKITEGT 349

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           F          +  +V  +D      L+ + +     K++++  +  Y +   S
Sbjct: 350 FDVNDIITETKNQLLVTRTDINHNADLFSVNTKNGTMKQVTEVNKEMYQNIATS 403


>gi|300785505|ref|YP_003765796.1| hypothetical protein AMED_3611 [Amycolatopsis mediterranei U32]
 gi|299795019|gb|ADJ45394.1| WD-40 repeat-containing protein [Amycolatopsis mediterranei U32]
          Length = 1230

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 54/367 (14%), Positives = 109/367 (29%), Gaps = 84/367 (22%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
             ++  G D+     RLWDV D             A+    A T +  I        G   
Sbjct: 774  SLVSGGADQ---TLRLWDVTDPAH----------ATQTASAFTRAAVIRAVAFAPDGR-- 818

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                  + +  S      L  + +   +            +   FSP+   +A  + D  
Sbjct: 819  ------TVAAASTDQMVRLWAVGKTELSELITFAGHAGAAYSAAFSPDGHTLATGSDDR- 871

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                        D A   +G   + +     S +GK   ++    +   +       +  
Sbjct: 872  -------TVRLWDVAGTLLGGHTNAVYHVALSPDGK--AVATAGYDGTVLVRKIATGDKP 922

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLY------------------------- 329
              LT       S +++PD   +   S  +   +L+                         
Sbjct: 923  IVLTAHQGPVNSVAFAPDGRTMASAS-ADHTVRLWDTHDLSHITPLGQALPGFTDAVNTV 981

Query: 330  -------VMQSNGSDQKRI--------------SQDKEASYFDPVWSPQGDLIAFTKFSG 368
                   ++ + GS++  +              +    A   +   SP G  +A      
Sbjct: 982  AYSHDGKILAAGGSNRVAVLLDVSDPRAPHTVATIPVGAGIQELAISPDGRRLAAAGDDS 1041

Query: 369  EKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNG 425
              +   +    G     L+    S++++  +SP G  L  + +   D   +L+ +D   G
Sbjct: 1042 NVWMWDITHPTGLLVPSLLSGHNSDVKSVAFSPDGHFLASASR---DATVRLWDLDNPRG 1098

Query: 426  RNETLIN 432
            R++T +N
Sbjct: 1099 RDKTPVN 1105



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 100/277 (36%), Gaps = 32/277 (11%)

Query: 182 ESVVSGIIKNSLCVMD-RDGANIRYL---TPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +++ +G   +++ + D  D  +   +          +    F  + + +A ++ D     
Sbjct: 681 KTLATGSTDHTVRIWDLSDPEHPVPMGDPLTRHTDTVLSVAFRRDGKLLATSSSDQ---- 736

Query: 238 RVYLMDTRIDRAP----KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD---LQ 290
            + L DT   R P      +      + +  FS +G   + S   D+ + ++ V      
Sbjct: 737 TIRLWDTTDPRHPVAVGAPLTGHSGDVSSIAFSPDGHSLV-SGGADQTLRLWDVTDPAHA 795

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--KRISQDKE-A 347
           +      T    I   A ++PD   +   S     +Q+  + + G  +  + I+      
Sbjct: 796 TQTASAFTRAAVIRAVA-FAPDGRTVAAAS----TDQMVRLWAVGKTELSELITFAGHAG 850

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           + +   +SP G  +A          + +    G+   L    + +     SP G+++  +
Sbjct: 851 AAYSAAFSPDGHTLATGSDDRT---VRLWDVAGTL--LGGHTNAVYHVALSPDGKAVATA 905

Query: 408 RKKDGDTGSKLYSID---LNGRNETLINTPAYASDPQ 441
                    K+ + D   +   ++  +N+ A+A D +
Sbjct: 906 GYDGTVLVRKIATGDKPIVLTAHQGPVNSVAFAPDGR 942



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/355 (14%), Positives = 103/355 (29%), Gaps = 65/355 (18%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G  +  G D   V  RLWDV     ++G              HT  + +Y       G  
Sbjct: 861  GHTLATGSDDRTV--RLWDVAG--TLLG-------------GHT--NAVYHVALSPDG-- 899

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                    ++V +     ++ V      +   +  +    +    F+P+ + +A A+ D 
Sbjct: 900  --------KAVATAGYDGTVLVRKIATGDKPIVLTAHQGPVNSVAFAPDGRTMASASADH 951

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               L      + I    + +  F   +    +S +GK                +D+    
Sbjct: 952  TVRLWDTHDLSHITPLGQALPGFTDAVNTVAYSHDGKILA---AGGSNRVAVLLDVSDPR 1008

Query: 294  TER----LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                   +     I    + SPD  ++    D        +    G     +     +  
Sbjct: 1009 APHTVATIPVGAGIQ-ELAISPDGRRLAAAGDDSNVWMWDITHPTGLLVPSLLSGHNSDV 1067

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--------------LLVEDSNLQAP 395
                +SP G  +A            +    G  +               L+V    + + 
Sbjct: 1068 KSVAFSPDGHFLASASRDATVRLWDLDNPRGRDKTPVNPSPDKPLDLTGLIVHPDVVYSV 1127

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSI----------DLNGRNETLINTPAYASDP 440
             +S  G +L  S   DG    +L+ +          DL G  + + +  A+  D 
Sbjct: 1128 AFSGDGATLA-SAAADGRV--RLWDVHDRDHPTALADLTGHTDRVYSV-AFGPDG 1178


>gi|282896269|ref|ZP_06304291.1| Serine/Threonine protein kinase with WD40 repeat proteins
           [Raphidiopsis brookii D9]
 gi|281198765|gb|EFA73644.1| Serine/Threonine protein kinase with WD40 repeat proteins
           [Raphidiopsis brookii D9]
          Length = 687

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/219 (13%), Positives = 73/219 (33%), Gaps = 11/219 (5%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + + +          P   Q +     SP+   +        D   + + + +  
Sbjct: 413 AGHKEIKLWNSKTGKQIISLPGHTQNINALAISPDGNNLV----SAGDDKTIKVWNLQTK 468

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +    +   +  + A   S + K  + S   D+ + ++S+ L     + L +  +   S 
Sbjct: 469 KLTFNLVGHQDSVQALAISQDSKTLV-SAGDDKTIKVWSL-LTGKFLKTLLDHNYWVRSL 526

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           + SPD   +   S  +   +++ +  ++G     +      +     +SP    +  T  
Sbjct: 527 ALSPDGFTLASGSF-DKTIKIWNINQTSGQKPTTLLDTTSQTVTSLTFSPDSSKLVSTSR 585

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 I        +     +  N+ +  +SP G++LI
Sbjct: 586 DR---QIKFWDIKNKEMIFASKKQNVTSVIFSPDGKTLI 621



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/258 (17%), Positives = 89/258 (34%), Gaps = 40/258 (15%)

Query: 111 LVTGRVIKEGKDRLRV---EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
           L    +  +G   +     E +LW+ K  KQII               HT   +I     
Sbjct: 398 LAVVAITPDGNTIVSAGHKEIKLWNSKTGKQIISLP-----------GHT--QNINALAI 444

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G           ++VS     ++ V +     + +        +     S + + + 
Sbjct: 445 SPDG----------NNLVSAGDDKTIKVWNLQTKKLTFNLVGHQDSVQALAISQDSKTLV 494

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                  D   + +      +  K + +    + +   S +G     S   D+ + I+++
Sbjct: 495 ----SAGDDKTIKVWSLLTGKFLKTLLDHNYWVRSLALSPDGFTLA-SGSFDKTIKIWNI 549

Query: 288 DLQSNA--TERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQD 344
           +  S    T  L  T     S ++SPDSS++V  S DR    Q+        +++ I   
Sbjct: 550 NQTSGQKPTTLLDTTSQTVTSLTFSPDSSKLVSTSRDR----QIKFWDI--KNKEMIFAS 603

Query: 345 KEASYFDPVWSPQGDLIA 362
           K+ +    ++SP G  + 
Sbjct: 604 KKQNVTSVIFSPDGKTLI 621



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 61/195 (31%), Gaps = 14/195 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +P+   +  A + +     + L +++  +    +      I A   S +G   +    
Sbjct: 402 AITPDGNTIVSAGHKE-----IKLWNSKTGKQIISLPGHTQNINALAISPDGNNLV---S 453

Query: 278 KDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +   I   +LQ+      L        + + S DS  +V   D    + + V      
Sbjct: 454 AGDDKTIKVWNLQTKKLTFNLVGHQDSVQALAISQDSKTLVSAGD---DKTIKVWSLLTG 510

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQA 394
              +   D          SP G  +A   F        + +  G +   L       + +
Sbjct: 511 KFLKTLLDHNYWVRSLALSPDGFTLASGSFDKTIKIWNINQTSGQKPTTLLDTTSQTVTS 570

Query: 395 PTWSPSGRSLIFSRK 409
            T+SP    L+ + +
Sbjct: 571 LTFSPDSSKLVSTSR 585



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 53/147 (36%), Gaps = 18/147 (12%)

Query: 182 ESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
            ++ SG    ++ + + +   G     L  +  Q +    FSP+  K+   + D     +
Sbjct: 533 FTLASGSFDKTIKIWNINQTSGQKPTTLLDTTSQTVTSLTFSPDSSKLVSTSRDR----Q 588

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSV----DLQS 291
           +   D +         + +  + +  FS +GK   IS  K   D +  I S+    D+  
Sbjct: 589 IKFWDIKNKEMI--FASKKQNVTSVIFSPDGKTL-ISGAKSCLDCSDKISSMIKLWDVSK 645

Query: 292 NATER-LTNTLFINISASYSPDSSQIV 317
                 L  T  I  S   S D   +V
Sbjct: 646 KEEIYALPVTTKIVTSLVLSADGKTLV 672



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 14/135 (10%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + +PD + IV      G +++ +  S    Q         +      SP G+ +     +
Sbjct: 402 AITPDGNTIV----SAGHKEIKLWNSKTGKQIISLPGHTQNINALAISPDGNNLV---SA 454

Query: 368 GEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G+   I V      +    L+    ++QA   S   ++L+       D   K++S+ L G
Sbjct: 455 GDDKTIKVWNLQTKKLTFNLVGHQDSVQALAISQDSKTLV---SAGDDKTIKVWSL-LTG 510

Query: 426 RN-ETLINTPAYASD 439
           +  +TL++   +   
Sbjct: 511 KFLKTLLDHNYWVRS 525


>gi|281180743|dbj|BAI57073.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 416

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 70/203 (34%), Gaps = 41/203 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA--LISVQKDEAMDIYSV----DLQSNAT-----------E 295
           +GN     +    S  G++   L  V+  +    + V     L    T            
Sbjct: 223 VGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKVAGDAPLSGTETTLPAPPRGVVQR 282

Query: 296 RLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT T        +N+   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 283 RLTFTHHRASPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 342

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I        +   L E      +  A  +SP G
Sbjct: 343 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDG 398

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN 424
           + L +          +L+  + +
Sbjct: 399 QWLAWMED------GQLWITETD 415



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 415



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 5/104 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            ++   +   N  S   A  FS +G+       +D  + I   D
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW--MEDGQLWITETD 415


>gi|256396190|ref|YP_003117754.1| peptidase S41 [Catenulispora acidiphila DSM 44928]
 gi|256362416|gb|ACU75913.1| peptidase S41 [Catenulispora acidiphila DSM 44928]
          Length = 1147

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/299 (15%), Positives = 95/299 (31%), Gaps = 63/299 (21%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYAT----------YDDEDILRV 239
           + L     DG+++R    + D   F  R +  +  +V +              +   L V
Sbjct: 216 SELYSCRPDGSDLRQ--HTDDPSRFYARHAATDGTRVVFMRGGRLWLLDELDGEARPLEV 273

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEAMDIYSVDLQSNATERL 297
            L  TRI R    +   +++     F+++  G+   +SV+      I+ +  +      L
Sbjct: 274 RLSGTRIGRTEYPVPTSKNLSG---FAADQTGRAIAVSVRG----TIHWLAAKDGPARAL 326

Query: 298 TNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNG--------------------- 335
             T  +         ++    + +D  G+  + +    G                     
Sbjct: 327 AVTPGVRARMPVVLGETGFAAWVTDAGGEWSIEIGPVEGDDGADGFGALGSAADGSGADG 386

Query: 336 -SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-- 392
            S  +RI   +         SP G  +A +        + V+  +    R++    +   
Sbjct: 387 SSAVRRILTGEVTRVAGLAASPDGAHLAVSTEDN---RLMVIDVESGTARVVASGPHNAW 443

Query: 393 ----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ---WVG 444
               + P +SP  R L ++     D   K+   D+         TP   +D +   W  
Sbjct: 444 GTLAEDPVFSPDSRWLAWAEGTGADGPRKIRLADVAS------LTPVDVTDGRFVDWSP 496



 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 48/246 (19%), Positives = 84/246 (34%), Gaps = 39/246 (15%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S  Q    PR SP+  +VA+A   D     VY        A +             ++
Sbjct: 43  YTSDWQPAKHPRLSPDGARVAWARRRDG-APEVYAAAVDGGAATRLTYWADDRTRVLGWA 101

Query: 267 SNGKRALISVQKD--EAMDIYSVDLQSNATERLTNT-----------------LFINISA 307
           S  +  +   ++     +  ++V  +      L                        I A
Sbjct: 102 SAEEVIVACGRQPLRGDVRAHAVPAEGGLPVLLPYGTLQELAVNGPGGAVMTRRGYGIEA 161

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++        ++  R G      + ++G  D +RI +  E +   P+W   GD  AF   
Sbjct: 162 AW--------WKRYRGGTAGKLWVDADGSGDFQRILRAHEGNLDAPMWV--GDRAAFLSD 211

Query: 367 SGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LN 424
           +G    +   + DGS  R   +D S   A   +  G  ++F R      G +L+ +D L+
Sbjct: 212 AGGVSELYSCRPDGSDLRQHTDDPSRFYARHAATDGTRVVFMR------GGRLWLLDELD 265

Query: 425 GRNETL 430
           G    L
Sbjct: 266 GEARPL 271



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 50/132 (37%), Gaps = 3/132 (2%)

Query: 198 RDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
            DG++ +R +       +     SP+   +A +T D+  ++      T    A      +
Sbjct: 384 ADGSSAVRRILTGEVTRVAGLAASPDGAHLAVSTEDNRLMVIDVESGTARVVASGPHNAW 443

Query: 257 RSMILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            ++   P FS + +    +     D    I   D+ S     +T+  F++ S +++ D  
Sbjct: 444 GTLAEDPVFSPDSRWLAWAEGTGADGPRKIRLADVASLTPVDVTDGRFVDWSPAFTLDGK 503

Query: 315 QIVFESDREGKE 326
            + F S R    
Sbjct: 504 HLAFLSKRTYDP 515



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 63/188 (33%), Gaps = 16/188 (8%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK--RALISVQKDEAMDIYSVDL 289
                + V L +T         G   S+ + P    +G      +    D +      D 
Sbjct: 331 GVRARMPVVLGETGFAAWVTDAGGEWSIEIGPVEGDDGADGFGALGSAADGSG----ADG 386

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            S     LT  +      + SPD + +   ++     +L V+       + ++     ++
Sbjct: 387 SSAVRRILTGEVTRVAGLAASPDGAHLAVSTE---DNRLMVIDVESGTARVVASGPHNAW 443

Query: 350 F----DPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGR 402
                DPV+SP    +A+ + +G      I +          + +      +P ++  G+
Sbjct: 444 GTLAEDPVFSPDSRWLAWAEGTGADGPRKIRLADVASLTPVDVTDGRFVDWSPAFTLDGK 503

Query: 403 SLIFSRKK 410
            L F  K+
Sbjct: 504 HLAFLSKR 511



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 59/179 (32%), Gaps = 25/179 (13%)

Query: 278 KDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +        VD   +   +  L        +  +     +  F SD  G  +LY  + +G
Sbjct: 168 RGGTAGKLWVDADGSGDFQRILRAHEGNLDAPMWV--GDRAAFLSDAGGVSELYSCRPDG 225

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL------VED 389
           SD ++ + D    Y     +  G  + F +       + ++ +   + R L         
Sbjct: 226 SDLRQHTDDPSRFYARHAAT-DGTRVVFMR----GGRLWLLDELDGEARPLEVRLSGTRI 280

Query: 390 SNLQAPTWSPSGRSLI-FSRKKDGD------TGSKLYSIDLNGRNETLINTPA-YASDP 440
              + P   P+ ++L  F+  + G        G+  +    +G    L  TP   A  P
Sbjct: 281 GRTEYPV--PTSKNLSGFAADQTGRAIAVSVRGTIHWLAAKDGPARALAVTPGVRARMP 337



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 66/214 (30%), Gaps = 26/214 (12%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +  Y      ++++         + +      + AP +   G RA          ++YS
Sbjct: 163 WWKRYRGGTAGKLWVDADGSGDFQRILRAHEGNLDAPMW--VGDRAAFLSDAGGVSELYS 220

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK----RIS 342
                +   + T+      +   + D +++VF   R G  +L+++     + +    R+S
Sbjct: 221 CRPDGSDLRQHTDDPSRFYARHAATDGTRVVFM--RGG--RLWLLDELDGEARPLEVRLS 276

Query: 343 QDKEASYFDPVWSPQ----------GDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDS 390
             +      PV + +          G  IA +        I  +       R L      
Sbjct: 277 GTRIGRTEYPVPTSKNLSGFAADQTGRAIAVSVRG----TIHWLAAKDGPARALAVTPGV 332

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             + P          +     G+   ++  ++ +
Sbjct: 333 RARMPVVLGETGFAAWVTDAGGEWSIEIGPVEGD 366



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 4/93 (4%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQ----ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            N L V+D +    R +          +  +P FSP+ + +A+A     D  R   +   
Sbjct: 419 DNRLMVIDVESGTARVVASGPHNAWGTLAEDPVFSPDSRWLAWAEGTGADGPRKIRLADV 478

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
               P  + + R +  +P F+ +GK      ++
Sbjct: 479 ASLTPVDVTDGRFVDWSPAFTLDGKHLAFLSKR 511


>gi|218707335|ref|YP_002414854.1| hypothetical protein ECUMN_4220 [Escherichia coli UMN026]
 gi|218434432|emb|CAR15360.1| conserved hypothetical protein [Escherichia coli UMN026]
          Length = 404

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 68/200 (34%), Gaps = 41/200 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA--LISVQKDEAMDIYSV----DLQSNAT-----------E 295
           +GN     +    S  G++   L  V+  +    + V     L    T            
Sbjct: 211 VGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKVAGDAPLSGTETTLPAPPRGVVQR 270

Query: 296 RLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT  +        N+   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 271 RLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 330

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I        +   L E      +  A  +SP G
Sbjct: 331 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDG 386

Query: 402 RSLIFSRKKDGDTGSKLYSI 421
           + L +        G +L+  
Sbjct: 387 QWLAWME------GGQLWIT 400



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVF 318
                 I     QS   E LT       SA    +SPD   + +
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW 391



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G   R LT ++  I     + P+ + + +    D 
Sbjct: 298 TQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 352

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            I   +     ++   +   N  S   A  FS +G+    
Sbjct: 353 RIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW 391


>gi|303236359|ref|ZP_07322949.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           disiens FB035-09AN]
 gi|302483417|gb|EFL46422.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           disiens FB035-09AN]
          Length = 731

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 114/324 (35%), Gaps = 33/324 (10%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           +  V   K+ +   F +     R       +++ ++   ++   +  + +V E+ +    
Sbjct: 106 VVKVNTGKETLLVNFKTKKIEQRF------ENVTEAQAADRNAVSGALAYVLENQLYVSN 159

Query: 190 KNSLCVMDRDGANI----RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                 +  DG+      + +      I     +SPN +++A+   D   +    L++ +
Sbjct: 160 NGQTKQLTSDGSRSIVYGQAVHRDEFGIKGGLYWSPNGERLAFYRMDQSMVTDFPLINVQ 219

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN- 304
                 + G  R     P          ++ +    + +   D+ ++ T  L      + 
Sbjct: 220 EVDWTPKKGESRMATPEPTPYP------MAGETSHKVTVGVYDINTSKTVYLKAGDPTDR 273

Query: 305 --ISASYSPDSSQIV-FESDREGKE-QLYVMQSNGSDQ-KRISQDKEASYFDPV------ 353
              +  +SPD+  I  FE +R+  +  L    +   D+   +  + +A Y +P       
Sbjct: 274 YFTNIQWSPDNKTIYMFELNRDQNDCHLVSYDAQTGDKIAELYHETDAKYVEPSHPILFL 333

Query: 354 -WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKK 410
            W    +             + +  KDG + + + + + +      ++   +S+I+   +
Sbjct: 334 PW--NSNQFVMQSQKDGYNHLYLFNKDGKELKQITKGNFVVMDILGFNEKAKSIIYVSNE 391

Query: 411 DGDTGSKLYSIDLNGRNETLINTP 434
                   +S+++     TL++  
Sbjct: 392 CSPIQRNTWSVNVANGKRTLLDNG 415


>gi|293407329|ref|ZP_06651251.1| yidR protein [Escherichia coli FVEC1412]
 gi|298383071|ref|ZP_06992666.1| yidR protein [Escherichia coli FVEC1302]
 gi|300896018|ref|ZP_07114579.1| conserved hypothetical protein [Escherichia coli MS 198-1]
 gi|291425620|gb|EFE98656.1| yidR protein [Escherichia coli FVEC1412]
 gi|298276907|gb|EFI18425.1| yidR protein [Escherichia coli FVEC1302]
 gi|300360078|gb|EFJ75948.1| conserved hypothetical protein [Escherichia coli MS 198-1]
          Length = 416

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 68/200 (34%), Gaps = 41/200 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA--LISVQKDEAMDIYSV----DLQSNAT-----------E 295
           +GN     +    S  G++   L  V+  +    + V     L    T            
Sbjct: 223 VGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKVAGDAPLSGTETTLPAPPRGVVQR 282

Query: 296 RLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT  +        N+   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 283 RLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 342

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I        +   L E      +  A  +SP G
Sbjct: 343 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDG 398

Query: 402 RSLIFSRKKDGDTGSKLYSI 421
           + L +        G +L+  
Sbjct: 399 QWLAWME------GGQLWIT 412



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 40/104 (38%), Gaps = 7/104 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVF 318
                 I     QS   E LT       SA    +SPD   + +
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW 403



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 403


>gi|281206705|gb|EFA80890.1| hypothetical protein PPL_06125 [Polysphondylium pallidum PN500]
          Length = 914

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 87/245 (35%), Gaps = 25/245 (10%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S ++  S +     I N +     D A +   +     +      SP    +A ++ D  
Sbjct: 30  SYLISCSSNSNDIKIYNVVNEKSTDLAPVEVKSHHSSPVTSV-AISPKGDYLASSSLDKT 88

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            +L      ++  +  K I  F ++I    FS  G     +   D    I  +D      
Sbjct: 89  IVLFTSESLSKQTQESKTIT-FSNVITYVTFSPTGSYLA-AATNDNIRLINMMDHS---- 142

Query: 295 ERLTNTLFINI---SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-------KRISQD 344
            ++      +    S +YSP+ + +V     +G  +++ +     D        +  S  
Sbjct: 143 -QIITFKAHDGMIQSINYSPNGNYLVSIGSDDGMLKIWSISQVSEDSVEPVFEMELSSNG 201

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPS 400
            +A+     W P    +++T+       + + +KDG Q   + E      +     WSP+
Sbjct: 202 GDAAKTMVSWKPDSTALSYTESQT---VVSLTEKDGWQNNTVFEQNGHTRDTNGVAWSPN 258

Query: 401 GRSLI 405
           G+ L 
Sbjct: 259 GKYLA 263



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 75/224 (33%), Gaps = 46/224 (20%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             ++    FSP    +A AT D+     + L++               MI +  +S NG 
Sbjct: 110 SNVITYVTFSPTGSYLAAATNDN-----IRLINMMDHSQIITFKAHDGMIQSINYSPNGN 164

Query: 271 RALISVQKDEAMDIYS--------------VDLQSNATERLTNTLFINISASYSPDSSQI 316
             +     D  + I+S              ++L SN               S+ PDS+ +
Sbjct: 165 YLVSIGSDDGMLKIWSISQVSEDSVEPVFEMELSSNG------GDAAKTMVSWKPDSTAL 218

Query: 317 VFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +         ++++G +   V + NG      ++D         WSP G  +A    SG
Sbjct: 219 SYTESQTVVSLTEKDGWQNNTVFEQNGH-----TRDTNG----VAWSPNGKYLA---SSG 266

Query: 369 EKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +   I +      +        +N+   +W   G  L F   K 
Sbjct: 267 QDKYIMIWDPVSLETVNDFKHQNNICNLSWRNDGNCLAFIDSKG 310


>gi|147799518|emb|CAN70732.1| hypothetical protein VITISV_040379 [Vitis vinifera]
          Length = 362

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 97/227 (42%), Gaps = 16/227 (7%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +    ++P   K+A + +  E    V +++  +      + + ++ +    +S +    L
Sbjct: 91  IMWKSWAPI--KLA-SLFATEATRLVKVLENGVLILRHMLQSHQNPVSFVAWSPD-DTML 146

Query: 274 ISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           ++    E + ++  D+++   +    +  FI  S ++ PDS +IV  S  + ++ +Y+  
Sbjct: 147 LTCGNGEVLKLW--DVETGTCKHTFGDHGFIVSSCAWFPDSKRIVCGSS-DPEKGIYMWD 203

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            +G++ K     +     D   +P G+ +        +  I ++    + E ++ ED ++
Sbjct: 204 CDGNEIKAWKGMRMPKVLDLAVTPDGENLISI---FSEKEIRILNVGTNAEHVISEDYSI 260

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            + + S   + LI +   +     +++  D+ G+ E  +    +  +
Sbjct: 261 TSLSVSRDSKFLIVNLNSE-----EIHMWDVAGKWEKPLKYTGHKQN 302


>gi|323949932|gb|EGB45816.1| hypothetical protein ERKG_03775 [Escherichia coli H252]
          Length = 410

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 73/203 (35%), Gaps = 41/203 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA----LISVQKDEAMDIYS--VDLQSNAT-----------E 295
           +GN     +    S  G++     ++ + KDEA    +  V L    T            
Sbjct: 217 VGNHALAFIGDTLSPKGEKVPELFIVELPKDEAGWKAAGDVPLSGTETTLPAPPRGVVQR 276

Query: 296 RLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT T        +NI   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 277 RLTFTHHRIYPGLVNIPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 336

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I        +   L E      +  A  +SP G
Sbjct: 337 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDG 392

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN 424
           + L +          +L+  + +
Sbjct: 393 QWLAWMED------GQLWITETD 409



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 12/177 (6%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFS 220
           I +    E G   +  + +S +  +        V  R       + P    I     R +
Sbjct: 241 IVELPKDEAGWKAAGDVPLSGTETTLPAPPRGVVQRRLTFTHHRIYPGLVNIPRHWVRCN 300

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     +    
Sbjct: 301 PQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN-- 358

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
              I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 359 --RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 409


>gi|320193765|gb|EFW68398.1| hypothetical protein YidR [Escherichia coli WV_060327]
          Length = 416

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   GS+ ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGSEPRQLTHNKTDIQSAFNWHPSGEWLGFVLEN----RIACAHAQSGKVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +          +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWMED------GQLWITETD 415



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     ++
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGSEPRQLTHNKTDIQSAFNWHPSGEWLGFVLE 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 364 N----RIACAHAQSGKVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 415



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 8/114 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G+  R LT ++  I     + P+ + + +    + 
Sbjct: 310 TQIAFLM---RDDNGIVQLWLISPQGSEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--EN 364

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            I   +    +++   +   N  S   A  FS +G+       +D  + I   D
Sbjct: 365 RIACAHAQSGKVEYLTENHANPPSAD-AVVFSPDGQWLAW--MEDGQLWITETD 415


>gi|229067924|ref|ZP_04201240.1| Acylamino-acid-releasing enzyme [Bacillus cereus F65185]
 gi|228715200|gb|EEL67060.1| Acylamino-acid-releasing enzyme [Bacillus cereus F65185]
          Length = 654

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 96/293 (32%), Gaps = 45/293 (15%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++        +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 32  VAFVKKTADWKDNTYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDARCIAYLSPVGD 90

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQS-- 291
              ++++     D    +I + +  +   ++   GK      Q  E  +I    DL    
Sbjct: 91  GENQIFVKSLD-DYREVQITDKKEGVSTFKWGPTGKGLYYVTQSKECEEIKKRKDLYGDF 149

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  +     +I I           V +SD +  E   V         +++  K+  
Sbjct: 150 QHIGKEHQNNCLYYIEIE---------KVIQSDTDEHENRVVY--------QLTDGKDFH 192

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWSPSG 401
             +   S  G  + F               + ++     + + L V+     +  +SP G
Sbjct: 193 IHEFDISNDGKKVVFMAAPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPDG 252

Query: 402 RSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
             + ++         R    D+  ++Y ++  G     +        P QW  
Sbjct: 253 SKICYTASIREKDYYRNHIQDSTLEIYDMN-TGEVIQPLTNFDSTVMPLQWTA 304


>gi|117625965|ref|YP_859288.1| hypothetical protein APECO1_2768 [Escherichia coli APEC O1]
 gi|237703489|ref|ZP_04533970.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|115515089|gb|ABJ03164.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|226902753|gb|EEH89012.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|294493081|gb|ADE91837.1| conserved hypothetical protein [Escherichia coli IHE3034]
 gi|315285465|gb|EFU44910.1| conserved hypothetical protein [Escherichia coli MS 110-3]
          Length = 415

 Score = 61.2 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/203 (19%), Positives = 73/203 (35%), Gaps = 41/203 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA----LISVQKDEAMDIYS--VDLQSNAT-----------E 295
           +GN     +    S  G++     ++ + KDEA    +  V L    T            
Sbjct: 222 VGNHALAFIGDTLSPKGEKVPELFIVELPKDEAGWKAAGDVPLSGTETTLPAPPRGVVQR 281

Query: 296 RLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT T        +NI   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 282 RLTFTHHRIYPGLVNIPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 341

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I        +   L E      +  A  +SP G
Sbjct: 342 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDG 397

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN 424
           + L +          +L+  + +
Sbjct: 398 QWLAWMED------GQLWITETD 414



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 12/177 (6%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFS 220
           I +    E G   +  + +S +  +        V  R       + P    I     R +
Sbjct: 246 IVELPKDEAGWKAAGDVPLSGTETTLPAPPRGVVQRRLTFTHHRIYPGLVNIPRHWVRCN 305

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     +    
Sbjct: 306 PQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN-- 363

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
              I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 364 --RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 414


>gi|297736305|emb|CBI24943.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 78/197 (39%), Gaps = 28/197 (14%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM-DR 198
            GK++  SP   +++A        +     KG+   R++       SG    ++ +    
Sbjct: 305 TGKQYT-SPEEMKEVA-------LERYKKMKGNAPERLV-------SGSDDFTMFLWEPA 349

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  + +       Q++    FSP+ Q VA A++D      V L +    +          
Sbjct: 350 DSKHPKTRMTGHQQLVNHVYFSPDGQWVASASFDK----SVKLWNGTTGKFVAAFRGHVG 405

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIV 317
            +    +S++  R L+S  KD  + ++  D++++  ++ L        +  +SPD  ++ 
Sbjct: 406 PVYQISWSAD-SRLLLSGSKDSTLKVW--DIRTHKLKQDLPGHEDEVFAVDWSPDGEKVA 462

Query: 318 FESDREGKEQLYVMQSN 334
                 G++++  +   
Sbjct: 463 ----SGGRDRVLKLWMG 475



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 15/128 (11%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + +    FSP+ +++A  + D      V L D             ++ +L   +S +
Sbjct: 108 GHTEAVLSVAFSPDGRQLASGSGDT----TVRLWDLNTQTPMYTCTGHKNWVLCIAWSPD 163

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSP-----DSSQIVFESD 321
           GK  + S  K   +  +  D Q+       L          S+ P        + V  S 
Sbjct: 164 GKHLV-SGSKAGELQCW--DPQTGKPSGNPLIGHKKWITGISWEPVHLRAPCRRFV-SSS 219

Query: 322 REGKEQLY 329
           ++G  +++
Sbjct: 220 KDGDARIW 227



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 9/146 (6%)

Query: 232 DDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L +    + PK R+   + ++    FS +G+    S   D+++ ++  +  
Sbjct: 336 SGSDDFTMFLWEPADSKHPKTRMTGHQQLVNHVYFSPDGQWVA-SASFDKSVKLW--NGT 392

Query: 291 SNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +          +      S+S DS  ++  S       L V        K+     E   
Sbjct: 393 TGKFVAAFRGHVGPVYQISWSADSRLLLSGSK---DSTLKVWDIRTHKLKQDLPGHEDEV 449

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGV 375
           F   WSP G+ +A +        + +
Sbjct: 450 FAVDWSPDGEKVA-SGGRDRVLKLWM 474



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 42/151 (27%), Gaps = 13/151 (8%)

Query: 273 LISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           L+S   D  M ++     S     R+T    +     +SPD   +   S     + + + 
Sbjct: 334 LVSGSDDFTMFLWE-PADSKHPKTRMTGHQQLVNHVYFSPDGQWVASASF---DKSVKLW 389

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                      +      +   WS    L+           + V      + +  +    
Sbjct: 390 NGTTGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDST---LKVWDIRTHKLKQDLPGHE 446

Query: 392 LQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
            +     WSP G  +        D   KL+ 
Sbjct: 447 DEVFAVDWSPDGEKVA---SGGRDRVLKLWM 474



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 3/84 (3%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           I+R    I      +L+  FS +G++   S   D  + ++ ++ Q+      T      +
Sbjct: 99  INRCSSTIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT-PMYTCTGHKNWVL 156

Query: 306 SASYSPDSSQIVFESDREGKEQLY 329
             ++SPD   +V  S + G+ Q +
Sbjct: 157 CIAWSPDGKHLVSGS-KAGELQCW 179



 Score = 43.1 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 78/260 (30%), Gaps = 42/260 (16%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D +     Y        +    +SP+ + +            +   D +
Sbjct: 127 SGSGDTTVRLWDLNTQTPMYTCTGHKNWVLCIAWSPDGKHLV----SGSKAGELQCWDPQ 182

Query: 246 IDRA-PKRIGNFRSMILAPRFSSNGKRA----LISVQKDEAMDIYSVDLQ------SNAT 294
             +     +   +  I    +     RA     +S  KD    I+ V L+      S  T
Sbjct: 183 TGKPSGNPLIGHKKWITGISWEPVHLRAPCRRFVSSSKDGDARIWDVSLRKCVICLSGHT 242

Query: 295 ERLTNTLFINISASY--SPDSSQIVFESDRE-------GKEQLYVMQSNGSDQKRISQDK 345
             +T   +      Y  S D +  V+E+ +        G    +V     S +  +    
Sbjct: 243 LAVTCVKWGGDGVIYTGSQDCTIKVWETSQGKLIRELKGHGH-WVNSLALSTEYVLRTGA 301

Query: 346 EASYFDPVWSPQG-DLIAFTKF-------------SGEKFAIGVMKKDGSQE---RLLVE 388
                    SP+    +A  ++               + F + + +   S+    R+   
Sbjct: 302 FDHTGKQYTSPEEMKEVALERYKKMKGNAPERLVSGSDDFTMFLWEPADSKHPKTRMTGH 361

Query: 389 DSNLQAPTWSPSGRSLIFSR 408
              +    +SP G+ +  + 
Sbjct: 362 QQLVNHVYFSPDGQWVASAS 381



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 17/124 (13%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD  Q+   S   G   + +   N           +       WSP G  +     +
Sbjct: 117 AFSPDGRQLASGS---GDTTVRLWDLNTQTPMYTCTGHKNWVLCIAWSPDGKHLVSGSKA 173

Query: 368 GEK--FAIGVMKKDGSQERLLVEDSNLQAPTW------SPSGRSLIFSRKKDGDTGSKLY 419
           GE   +     K  G+   L+     +   +W      +P  R +  S  KDGD  ++++
Sbjct: 174 GELQCWDPQTGKPSGNP--LIGHKKWITGISWEPVHLRAPCRRFV--SSSKDGD--ARIW 227

Query: 420 SIDL 423
            + L
Sbjct: 228 DVSL 231


>gi|17233117|ref|NP_490207.1| WD repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17135639|dbj|BAB78185.1| WD-repeat protein [Nostoc sp. PCC 7120]
          Length = 342

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/279 (16%), Positives = 97/279 (34%), Gaps = 30/279 (10%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I     +  +   ++ +    +D   +R L+   D       +SP+      A+   +  
Sbjct: 19  IAVCGCTTQTPNTQDLIAQSPKDSQLVRTLSARSDSGYSV-AYSPSSVGTILASAGAK-- 75

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L +    +  + +           FS +G + L S  +D +++++  D+Q+    R
Sbjct: 76  -SIKLWNPNTGKLLRTLS---GQAFTVSFSPDG-QILASGSQDGSLNLW--DVQTGKLIR 128

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY------- 349
                   +   +SPD   +V  S+ +    + +      +  RI  D +A         
Sbjct: 129 TLQHSEPVLGVVFSPDGQTLV--SNLDLGSIIRLWNWRTGEIIRIKDDPDAYQKGFENFK 186

Query: 350 -FDPVWSPQGDLIAFTKFSGE---KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                +S  G  +  T  SG     + +   K+ GS +      S++ A   SP G +L 
Sbjct: 187 TQPATFSLDGQTLFATSGSGSMLQSWNLKTSKRTGSFD----AKSSINAVAISPDGNTLA 242

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              +   D   KL++I+      TL           +  
Sbjct: 243 TGIR---DNAIKLWNINDGKLIHTLTGHQGQVRTVAFSP 278



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 40/245 (16%), Positives = 85/245 (34%), Gaps = 21/245 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    SL + D     +       + +L    FSP+ Q +  +  D   I+R++   T 
Sbjct: 109 SGSQDGSLNLWDVQTGKLIRTLQHSEPVLGV-VFSPDGQTLV-SNLDLGSIIRLWNWRTG 166

Query: 246 IDRAPKRIGN-----FRSMILAPR-FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                K   +     F +    P  FS +G+    +      +  +  +L+++      +
Sbjct: 167 EIIRIKDDPDAYQKGFENFKTQPATFSLDGQTLFATSGSGSMLQSW--NLKTSKRTGSFD 224

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 + + SPD + +     R+    + +   N           +       +SP G 
Sbjct: 225 AKSSINAVAISPDGNTLA-TGIRD--NAIKLWNINDGKLIHTLTGHQGQVRTVAFSPDGT 281

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           L+A     G    + +      +E          + +  ++P G++L  S  +DG    K
Sbjct: 282 LLASGSSDGT---VKLWNATTGKEINTFTAHKEQVWSVAFNPDGKTLA-STGQDGSV--K 335

Query: 418 LYSID 422
           ++ + 
Sbjct: 336 IWGVS 340



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 40/116 (34%), Gaps = 7/116 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A    D+     + L +    +    +   +  +    FS +G     S  
Sbjct: 233 AISPDGNTLATGIRDN----AIKLWNINDGKLIHTLTGHQGQVRTVAFSPDGTLLA-SGS 287

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            D  + +++           T       S +++PD   +   + ++G  +++ +  
Sbjct: 288 SDGTVKLWNA-TTGKEINTFTAHKEQVWSVAFNPDGKTLA-STGQDGSVKIWGVSP 341



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 43/109 (39%), Gaps = 5/109 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++ +GI  N++ + + +   + +        +    FSP+   +A  + D      V L
Sbjct: 239 NTLATGIRDNAIKLWNINDGKLIHTLTGHQGQVRTVAFSPDGTLLASGSSDG----TVKL 294

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            +    +        +  + +  F+ +GK    S  +D ++ I+ V  Q
Sbjct: 295 WNATTGKEINTFTAHKEQVWSVAFNPDGKTLA-STGQDGSVKIWGVSPQ 342


>gi|325860329|ref|ZP_08173451.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
 gi|325482208|gb|EGC85219.1| OmpA family protein [Prevotella denticola CRIS 18C-A]
          Length = 697

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 55/159 (34%), Gaps = 22/159 (13%)

Query: 299 NTLFINISASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQK-------RISQDKEAS 348
           NT     + ++S D  ++      +D        +  SN SD          IS+D  +S
Sbjct: 235 NTEADEGTPAFSADGREMYITQCLTDPSYPRYAQIAVSNRSDAAWGKATKLEISRDTLSS 294

Query: 349 YFDPVWSPQGDLIAFTKF---SGEKFAIGVMKKDGSQER-------LLVEDSNLQAPTWS 398
           +  P  SP G+ + FT           I  ++  G            +    + + PT+ 
Sbjct: 295 FAHPAVSPDGNWLYFTSDMPGGKGGLDIWRVRLTGGTTGGVENLGDPVNTPGDEEFPTFR 354

Query: 399 PSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETLINTPAY 436
           P+G  L FS     G  G  +Y       +   +  P Y
Sbjct: 355 PNGD-LYFSSNGHGGLGGLDIYIAKAGSDHRYHLEHPGY 392



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 38/118 (32%), Gaps = 20/118 (16%)

Query: 344 DKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKD----GSQERLLVED---SN 391
           + EA    P +S  G  +  T+            I V  +     G   +L +     S+
Sbjct: 235 NTEADEGTPAFSADGREMYITQCLTDPSYPRYAQIAVSNRSDAAWGKATKLEISRDTLSS 294

Query: 392 LQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNET-------LINTPAYASDPQ 441
              P  SP G  L F+     G  G  ++ + L G            +NTP     P 
Sbjct: 295 FAHPAVSPDGNWLYFTSDMPGGKGGLDIWRVRLTGGTTGGVENLGDPVNTPGDEEFPT 352



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 41/143 (28%), Gaps = 20/143 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRS 258
           ++         P  SP+   + + +        + +   R+               N   
Sbjct: 287 ISRDTLSSFAHPAVSPDGNWLYFTSDMPGGKGGLDIWRVRLTGGTTGGVENLGDPVNTPG 346

Query: 259 MILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERL------TNTLFINISASY 309
               P F  NG     S         +DIY     S+    L       N+   +   ++
Sbjct: 347 DEEFPTFRPNGD-LYFSSNGHGGLGGLDIYIAKAGSDHRYHLEHPGYPLNSQGDDFGMTF 405

Query: 310 SPDSSQIVFESDRE---GKEQLY 329
               ++  F S+R    G + +Y
Sbjct: 406 EGLHNRGFFSSNRGDGRGWDHIY 428


>gi|298251634|ref|ZP_06975437.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297546226|gb|EFH80094.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 1294

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/280 (12%), Positives = 79/280 (28%), Gaps = 30/280 (10%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISD 160
           DW      +   G  +  G     V  RLW+V   + + I + +           HT + 
Sbjct: 561 DWPGEHVSLSADGSFLAAGGSDQAV--RLWEVSTGRCLHILQGYTMQ-------GHTKA- 610

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            I        G F            S     ++ + +       ++             S
Sbjct: 611 -ISSVCLSGDGSFL----------ASSSWDETVRLWEVSTGRCLHILRGHTNGATSVSLS 659

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + + +A  + +      + L +                + +   S++G+    S  +D 
Sbjct: 660 ADGRWLA--SGEGRKDGTIRLWEVSTGYCLHIFQGHTGGVTSVSLSTDGRWLA-SGSEDT 716

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + ++ V         L   +    S S S D + +       G ++   +    S +  
Sbjct: 717 TIRLWEVS-TGRCLRILRGHIGRVTSVSLSADGNWLA----SGGADKTIRLWEVSSGRCL 771

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +  + +S      S  G  +A  +       +      G
Sbjct: 772 CTFQQGSSTDSVSLSADGRWLASGEGGTRNVYLWRCHDSG 811



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 95/271 (35%), Gaps = 28/271 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ V +       ++     + +     S +   +A +++D      V + +  
Sbjct: 918  SGGGDKTVRVWEVSSGRCLHILQGHTKAISSVCLSGDGSFLASSSWDK----TVRVWEVG 973

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFI 303
              R       +   + +   S++G+    +V+ D+   ++ V+ +      +  T  + +
Sbjct: 974  TGRCLHTFSGYPDAVESVSLSADGRWFASAVRDDKICRVWEVNTRHCLGIFQGHTAKVGV 1033

Query: 304  NISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                S S D   +   S   G ++ + + + +      I Q          +S  G  +A
Sbjct: 1034 V---SLSVDGRWLA--SGSLGFDRTVRLWEVSTGRCVHILQGHTNWVSSVSFSADGRWLA 1088

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPSGRSLIFSRKKDGDTGSKLYS 420
                      + + +    +   +++           S  GR LI   +   DT  +L+ 
Sbjct: 1089 SGSLDRT---VRLWEISTGRCVHILQGHTDCIDAVNLSADGRWLISGSR---DTTVRLWE 1142

Query: 421  IDLNGR-------NETLINTPAYASDPQWVG 444
            +   GR       + + + + + ++D +W+ 
Sbjct: 1143 VS-TGRCLHILRGHTSQVESVSLSTDGRWLA 1172



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 74/251 (29%), Gaps = 39/251 (15%)

Query: 112  VTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSP---------ASWRKIAH 156
                V   G              R+W+V   + +    F   P         A  R  A 
Sbjct: 945  AISSVCLSGDGSFLASSSWDKTVRVWEVGTGRCL--HTFSGYPDAVESVSLSADGRWFAS 1002

Query: 157  TISDD---------------IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             + DD               I+Q  T + G  +  +     +  S     ++ + +    
Sbjct: 1003 AVRDDKICRVWEVNTRHCLGIFQGHTAKVGVVSLSVDGRWLASGSLGFDRTVRLWEVSTG 1062

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               ++       +    FS + + +A  + D      V L +    R    +      I 
Sbjct: 1063 RCVHILQGHTNWVSSVSFSADGRWLASGSLDR----TVRLWEISTGRCVHILQGHTDCID 1118

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            A   S++G+   IS  +D  + ++ V         L        S S S D   +   S 
Sbjct: 1119 AVNLSADGRWL-ISGSRDTTVRLWEVS-TGRCLHILRGHTSQVESVSLSTDGRWLASGSS 1176

Query: 322  REGKEQLYVMQ 332
             +G   L+ + 
Sbjct: 1177 -DGTIHLWELD 1186


>gi|225556972|gb|EEH05259.1| WD domain-containing protein [Ajellomyces capsulatus G186AR]
          Length = 828

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 53/167 (31%), Gaps = 16/167 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  K+A           V + D        R+ +    +    +S +  +  IS  +
Sbjct: 513 FSHDGTKLATT----GRENIVIIYDVATFSVIHRLTDHGGPVAYATWSPDDSKL-ISCSQ 567

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D    ++  D+++     LT  +      SA+++P+    V     + + QL      G 
Sbjct: 568 DYKARLW--DVETGHCI-LTIDHHHEPVTSAAWAPNGDSFV-TGSLDCQSQLCHWSVAGE 623

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                    +    D   SP G  +           I V   +   E
Sbjct: 624 SL--YKWTGQYRVRDCAISPDGRRLIAISTEK---RIYVYNFETRAE 665



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 54/165 (32%), Gaps = 13/165 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G +   + +++    +   D+ + +   RLT+       A++SPD S+++  S   
Sbjct: 513 FSHDGTKLATTGREN---IVIIYDVATFSVIHRLTDHGGPVAYATWSPDDSKLISCSQ-- 567

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +  +                       W+P GD          +  +      G   
Sbjct: 568 -DYKARLWDVETGHCILTIDHHHEPVTSAAWAPNGDSFVTGSLDC-QSQLCHWSVAGESL 625

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                   ++    SP GR LI    +      ++Y  +   R E
Sbjct: 626 YKWTGQYRVRDCAISPDGRRLIAISTEK-----RIYVYNFETRAE 665



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 69/217 (31%), Gaps = 16/217 (7%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG--EKGDFNSRILFVSESVVSG 187
           L D   + QI    + ++       +    D     +    E  +    + ++  S    
Sbjct: 459 LLDQVKQTQINQCLYHNTAEPPSLYSDHQCDRAQFPLRTSFELSEHTDEVWYLEFSHDGT 518

Query: 188 I-----IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
                  +N + + D    ++ +        +    +SP+  K+   + D +      L 
Sbjct: 519 KLATTGRENIVIIYDVATFSVIHRLTDHGGPVAYATWSPDDSKLISCSQDYK----ARLW 574

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D         I +    + +  ++ NG    ++   D    +    +   +  + T   +
Sbjct: 575 DVETGHCILTIDHHHEPVTSAAWAPNGDS-FVTGSLDCQSQLCHWSVAGESLYKWT-GQY 632

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                + SPD  +++  S     +++YV       ++
Sbjct: 633 RVRDCAISPDGRRLIAISTE---KRIYVYNFETRAEE 666


>gi|153809520|ref|ZP_01962188.1| hypothetical protein BACCAC_03838 [Bacteroides caccae ATCC 43185]
 gi|149127828|gb|EDM19051.1| hypothetical protein BACCAC_03838 [Bacteroides caccae ATCC 43185]
          Length = 845

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 63/370 (17%), Positives = 113/370 (30%), Gaps = 72/370 (19%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            L+T         R R   +L ++K  K ++     ++    R +    SD +Y ++T  
Sbjct: 219 YLLTRYWNNHAAKRSRTYCQLTELKTGKVLL----DNARDGMRWMPK--SDKLYYTVTAL 272

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            G                   N +  +D    N   L     +  F   +SPN+  + Y 
Sbjct: 273 SG-------------------NDVITLDPATLNEETLLKGIPEQSF--TWSPNEDFLIYY 311

Query: 230 TYDDE--------------------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             ++                                 +   +R+            S +G
Sbjct: 312 PREEGEKEQGALRRIVSPADRIPNTRGRSFLAKYNIANGVSERLTYGNHSTYLQDISPDG 371

Query: 270 KRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           K  + S  K+           +Y VDL++   + L +       ASYSPD  Q++  +  
Sbjct: 372 KFMIYSTSKENITQRPFSLSSLYLVDLETLKVDTLFHDERFLGGASYSPDGKQLLLTASP 431

Query: 323 E-----GKE------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           E     GK             Q ++M       + I++D   +     W+     I F  
Sbjct: 432 EAFGGIGKNCGNHPIANDFDTQAFIMDLATRKIQPITKDFNPTVSPLQWNRGDGCIYFNT 491

Query: 366 FSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             G+   I      + S E+L +E     A T S     +     +        Y  D+ 
Sbjct: 492 DDGDCKNIYRYSPKNNSFEKLNLETDVTSAFTLSEYNPGIAAYIGQSDHNAGVAYLYDMK 551

Query: 425 GRNETLINTP 434
            +   L+  P
Sbjct: 552 KKTSRLLADP 561



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 44/238 (18%), Positives = 85/238 (35%), Gaps = 40/238 (16%)

Query: 218 RFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             SP+ + +   Y         R Y   T +      + N R  +   R+     +   +
Sbjct: 212 AISPSGKYLLTRYWNNHAAKRSRTYCQLTELKTGKVLLDNARDGM---RWMPKSDKLYYT 268

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           V      D+ ++D  +   E L   +    S ++SP+   +++    EG+++   ++   
Sbjct: 269 VTALSGNDVITLDPATLNEETLLKGI-PEQSFTWSPNEDFLIYYPREEGEKEQGALRRIV 327

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           S   RI   +  S+                    K+ I     +G  ERL   + +    
Sbjct: 328 SPADRIPNTRGRSFLA------------------KYNIA----NGVSERLTYGNHSTYLQ 365

Query: 396 TWSPSGRSLIFSRKKDGDTG-----SKLYSIDLNG-------RNETLINTPAYASDPQ 441
             SP G+ +I+S  K+  T      S LY +DL          +E  +   +Y+ D +
Sbjct: 366 DISPDGKFMIYSTSKENITQRPFSLSSLYLVDLETLKVDTLFHDERFLGGASYSPDGK 423


>gi|269925551|ref|YP_003322174.1| hypothetical protein Tter_0431 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789211|gb|ACZ41352.1| hypothetical protein Tter_0431 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 541

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 56/143 (39%), Gaps = 20/143 (13%)

Query: 264 RFSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTNTLF--INISASYSPDSSQIVF 318
           R S + +    +V        M +Y++ +       + +  +     S  +SPDS QI +
Sbjct: 197 RLSPDNRTLTYAVSVKSHSPRMKMYTIGIDGRNRRLIGDFPWQLWVASPVWSPDSKQIAY 256

Query: 319 ESDREGKE----QLYVMQSNGSDQKRI-------SQDKEASYFDP-VWSPQGDLIAFTKF 366
                  +    +L+VM ++GS++ R+       +     +  +P  W+P GD + +  +
Sbjct: 257 VVASGPGQEPGIELWVMNADGSNKHRVVKDPSFNTSLFYGNVQNPIRWTPYGD-LQYLDY 315

Query: 367 SGEKFAIGVMKKDGSQERLLVED 389
           +  K  I  +     +      D
Sbjct: 316 NSGK--IWTVDTTTGELSYRTAD 336



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 54/136 (39%), Gaps = 24/136 (17%)

Query: 336 SDQKRISQDKEASYFDPVW------SPQGDLIAF---TKFSGEKFAIGVMKKDGSQERLL 386
           +  +R+   + A YF  ++      SP    + +    K    +  +  +  DG   RL+
Sbjct: 174 NGVRRVVLTEPARYFPGMFEKYIRLSPDNRTLTYAVSVKSHSPRMKMYTIGIDGRNRRLI 233

Query: 387 VE---DSNLQAPTWSPSGRSLIF--SRKKDGDTGSKLYSIDLNGRNE-TLINTP------ 434
            +      + +P WSP  + + +  +     + G +L+ ++ +G N+  ++  P      
Sbjct: 234 GDFPWQLWVASPVWSPDSKQIAYVVASGPGQEPGIELWVMNADGSNKHRVVKDPSFNTSL 293

Query: 435 --AYASDP-QWVGFMD 447
                 +P +W  + D
Sbjct: 294 FYGNVQNPIRWTPYGD 309



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 42/99 (42%), Gaps = 7/99 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRS--MILAPRFSSNGKRALI 274
           R SP+ + + YA        R+ +    ID   +R IG+F     + +P +S + K+   
Sbjct: 197 RLSPDNRTLTYAVSVKSHSPRMKMYTIGIDGRNRRLIGDFPWQLWVASPVWSPDSKQIAY 256

Query: 275 SVQ----KDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            V     ++  ++++ ++   +   R+      N S  Y
Sbjct: 257 VVASGPGQEPGIELWVMNADGSNKHRVVKDPSFNTSLFY 295



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 53/139 (38%), Gaps = 15/139 (10%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYATY- 231
           ++R L  + SV S   +  +  +  DG N R +     Q  +  P +SP+ +++AY    
Sbjct: 201 DNRTLTYAVSVKSHSPRMKMYTIGIDGRNRRLIGDFPWQLWVASPVWSPDSKQIAYVVAS 260

Query: 232 --DDEDILRVYLMDTRIDRAPKRI-------GNFRSMILAP-RFSSNGKRALISVQKDEA 281
               E  + +++M+       + +         F   +  P R++  G    +      +
Sbjct: 261 GPGQEPGIELWVMNADGSNKHRVVKDPSFNTSLFYGNVQNPIRWTPYGDLQYLDYN---S 317

Query: 282 MDIYSVDLQSNATERLTNT 300
             I++VD  +      T  
Sbjct: 318 GKIWTVDTTTGELSYRTAD 336


>gi|126179161|ref|YP_001047126.1| Ig domain-containing protein [Methanoculleus marisnigri JR1]
 gi|125861955|gb|ABN57144.1| Ig domain protein, group 2 domain protein [Methanoculleus
           marisnigri JR1]
          Length = 1361

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/233 (11%), Positives = 69/233 (29%), Gaps = 24/233 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+         D  +  +             RI +  +    P  S  G   +    ++ 
Sbjct: 46  PDVDGNMVVWEDGRNGNKDIYFSDTPGYTGDRITSDPASQERPSIS--GDYIVWQDDRNG 103

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSP--DSSQIVFESDREGKEQLYVMQSNGSDQ 338
             DIY     +    +LT+    +    + P    + + +  D  G   + +        
Sbjct: 104 DWDIYLYQRSTGEETQLTD----DTGDQWLPIVRGNYVAWYDDSSGDTNIVLYDIAAGSV 159

Query: 339 KRI-------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           K +       +    ++ F P  S     +A+ + + E+     +     +  +    + 
Sbjct: 160 KDVIECDAKTTIPGGSTEFKPALS--EKYVAWVEEADERVHYYDIAAGEMKGPVSANTAI 217

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQ 441
              P+    G  + +   ++      +Y  +L+   E    + +  +    P 
Sbjct: 218 QSWPSL--YGGIIAWEDNRN--ASPDIYMTNLDDPFEGEHRITSDGSEQVAPA 266


>gi|282856501|ref|ZP_06265777.1| peptidase S9, prolyl oligopeptidase domain protein [Pyramidobacter
           piscolens W5455]
 gi|282585686|gb|EFB90978.1| peptidase S9, prolyl oligopeptidase domain protein [Pyramidobacter
           piscolens W5455]
          Length = 644

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 66/232 (28%), Gaps = 45/232 (19%)

Query: 213 ILFEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            L  P FSP+  K+AY      +D  +      +      + +++    S      +S +
Sbjct: 14  FLSRPAFSPDGGKIAYVVSSANFDKNNYDSALWLYDLAADSGRQLTFTNSEKFF-AWSRD 72

Query: 269 GKRALISVQKDEAMD----IYSVDLQSNATERLTN-------------TLFINI---SAS 308
           G+  + +  + +        Y++ L       L                 ++        
Sbjct: 73  GRELIFASGRGDVPKDSTRFYALPLDGGEARELFTIDRPASAIADLGGGRWLVTATFEPV 132

Query: 309 Y-SPDSSQIV------FESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           Y +P+ +         F ++ +G     +  L V  +      R++  K         S 
Sbjct: 133 YDNPEGADYYVIEQLPFTANGKGFVCQRRTGLAVYDAASGGFTRVTP-KHMEVARCHLSD 191

Query: 357 QGDL-----IAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSG 401
            G       + +T        +  +     +   L E      +   W   G
Sbjct: 192 DGRKALLVAVEYTDVKPTTNHVYELDLGTGELSCLSEGLTFGFKDAGWYKDG 243



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 8/90 (8%)

Query: 352 PVWSPQGDLIAFT----KFSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           P +SP G  IA+      F    +   + +        R L   ++ +   WS  GR LI
Sbjct: 18  PAFSPDGGKIAYVVSSANFDKNNYDSALWLYDLAADSGRQLTFTNSEKFFAWSRDGRELI 77

Query: 406 FSRKKDG--DTGSKLYSIDLNGRNETLINT 433
           F+  +       ++ Y++ L+G     + T
Sbjct: 78  FASGRGDVPKDSTRFYALPLDGGEARELFT 107


>gi|193214529|ref|YP_001995728.1| WD40 domain-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193088006|gb|ACF13281.1| WD-40 repeat protein [Chloroherpeton thalassium ATCC 35110]
          Length = 324

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 55/147 (37%), Gaps = 12/147 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  KVA A+YD+     V L D    +  +        +    FS++GK    S  
Sbjct: 47  AFSPDGTKVACASYDE----TVKLWDVVTGQMIRSFEGHNHWVECVAFSADGKLLA-SAG 101

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQ-SNG 335
           +D  + I+  D  +    +          A ++SPD     F +       +++   + G
Sbjct: 102 RDVTVKIW--DAATGKVLQTMKGHNDAARAVAFSPDGK---FLASVGIDSNIFIWDVATG 156

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIA 362
           S  K+I +          +S  G  + 
Sbjct: 157 SVVKQIKKGHPLYIEAVSFSADGKYMV 183



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 53/150 (35%), Gaps = 11/150 (7%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIV 317
            + +  FS +G +       DE + ++  D+ +    R            ++S D   + 
Sbjct: 42  SVRSAAFSPDGTKVA-CASYDETVKLW--DVVTGQMIRSFEGHNHWVECVAFSADGKLLA 98

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             + R+    + +  +      +  +    +     +SP G  +A        F   V  
Sbjct: 99  -SAGRD--VTVKIWDAATGKVLQTMKGHNDAARAVAFSPDGKFLASVGIDSNIFIWDV-- 153

Query: 378 KDGSQERLLVEDS--NLQAPTWSPSGRSLI 405
             GS  + + +     ++A ++S  G+ ++
Sbjct: 154 ATGSVVKQIKKGHPLYIEAVSFSADGKYMV 183



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/343 (13%), Positives = 108/343 (31%), Gaps = 51/343 (14%)

Query: 77  DVF-NLISQDSFKQKITNPDSIPRFQDW----NSLGAQVLVTGRVIKEGKD----RLRVE 127
            +F  +++    K++   P   P  +D            + +     +G           
Sbjct: 4   GLFSKVLNGLGLKKEPEKPAIPPVQEDEAIMHTLKHLDSVRSAAFSPDGTKVACASYDET 63

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            +LWDV   + I                                 +   + F ++  +  
Sbjct: 64  VKLWDVVTGQMI-------------------------RSFEGHNHWVECVAFSADGKLLA 98

Query: 188 IIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                + V   D A  + L      +       FSP+ + +A    D      +++ D  
Sbjct: 99  SAGRDVTVKIWDAATGKVLQTMKGHNDAARAVAFSPDGKFLASVGIDS----NIFIWDVA 154

Query: 246 IDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                K+I       I A  FS++GK  + +  +D  + I++        + L       
Sbjct: 155 TGSVVKQIKKGHPLYIEAVSFSADGKYMV-TGGEDPLVKIWNTS-SWELVKPLKPEGDFC 212

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            SA ++   ++IV   +RE    + +     +++  + +  E +     ++  G  I   
Sbjct: 213 YSARFNKAGTKIVTGGNRE---IIEIWNFETAERTHVMRAHEGAVRGVAFTADGKFIV-- 267

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
              G+   + +   +  +     +  +  + A   S  G+ ++
Sbjct: 268 -SGGDDEKVKLWNGETGEHIHTYKGHSKPVHAVDISQDGKFIV 309


>gi|158340251|ref|YP_001521421.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158310492|gb|ABW32107.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1268

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/281 (13%), Positives = 96/281 (34%), Gaps = 31/281 (11%)

Query: 129 RLWDVKDRKQIIGKKFFSSP--ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +L  V   K      + +       R++        +  +T  + D            + 
Sbjct: 567 QLLSVVRGKSSEEAGYVAGNVLNLLRQLPVDFCGYDFSHLTIRQAD------------LR 614

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  + +     D +  + +       +    FSP+ + +A   +  E    + L+    
Sbjct: 615 GLNLHGVKFTHSDLS--QSVFSKDFGGILSIAFSPDGKLIAAGDFKGE----IRLLRVPD 668

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINI 305
            +         + + +  FS      L S   D+ + ++  ++++    + L+       
Sbjct: 669 GQPLLTCSGHTNWVKSLAFSPT-NHLLASAGPDQTVRLW--NVRTGECLKLLSGHTNFIW 725

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++SPD + +   SD      + +  S      + S    A+     +SP    +A   
Sbjct: 726 EVAFSPDGTLLASCSD---DFTVRLWNSQTGQFLK-SFRYRAAARSIAFSPDNHELA-CG 780

Query: 366 FSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
           ++ +   I  +K  G   ++L      + +  +SP G+ L+
Sbjct: 781 YADQTIRIWEVK-SGQCLKVLAGHAGWVWSIAYSPDGQMLV 820



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 64/204 (31%), Gaps = 16/204 (7%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T  D +          IL+  FS +GK        D   +I  + +       LT +   
Sbjct: 624 THSDLSQSVFSKDFGGILSIAFSPDGKLIA---AGDFKGEIRLLRVPDGQP-LLTCSGHT 679

Query: 304 NI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           N   S ++SP +  +         + + +      +  ++        ++  +SP G L+
Sbjct: 680 NWVKSLAFSPTNHLLA---SAGPDQTVRLWNVRTGECLKLLSGHTNFIWEVAFSPDGTLL 736

Query: 362 AFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           A      + F + +      Q  +     +  ++  +SP    L        D   +++ 
Sbjct: 737 ASCS---DDFTVRLWNSQTGQFLKSFRYRAAARSIAFSPDNHELACGY---ADQTIRIWE 790

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
           +      + L     +     +  
Sbjct: 791 VKSGQCLKVLAGHAGWVWSIAYSP 814



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 41/100 (41%), Gaps = 5/100 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG +  +  + D    +   +       +++  FSPN Q +A A+ D      +   D  
Sbjct: 1130 SGSVDQTARLWDFKTNDCICIFEGHSGQIWDVAFSPNGQLLATASLDH----TIRCWDVE 1185

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
              +    +    + + +  FSS+G+R  IS   D  + ++
Sbjct: 1186 THKHLAILEGHTNGVTSVAFSSDGQRL-ISSSFDGTIKLW 1224



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 50/171 (29%), Gaps = 13/171 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  ++A    D      + + + +  +  K +      + +  +S +G+  +    
Sbjct: 769 AFSPDNHELACGYADQ----TIRIWEVKSGQCLKVLAGHAGWVWSIAYSPDGQMLV---S 821

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +   I   +LQS    ++L        S +       +   S     + + +      
Sbjct: 822 ACDDPIIRVWNLQSGECIQKLFGHSNSIRSIALCSSGHYLASGS---ADQLIKIWDIRTG 878

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
              +         +    +P    I  +        +    K G   R L 
Sbjct: 879 KCLKTLLGHTNWVWSVAINPT-QKIMASSSQDGSIRLWDYNK-GRCLRTLS 927



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 76/254 (29%), Gaps = 21/254 (8%)

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
             T  +  F +          +      + V   D   +R  + S    L  P  +   + 
Sbjct: 931  FTIFEAIFATTPFGSFNYSETEKQHEQILVSGGDAQVLRVWSLSDHNCLDFPGHTDAIRS 990

Query: 226  VAYATYDD-------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            VAY  +D             + L +    +  K +    + I +  F   GK    S   
Sbjct: 991  VAYCPHDQIIASGGGTGDRTIRLWNISNGQCIKILKGHSNGIWSLAFHPKGKFLA-SSGL 1049

Query: 279  DEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGS 336
            D++  ++  D+ S    E          S S+SP++  +   S DR     + +      
Sbjct: 1050 DQSAKLW--DIHSGECLETFQGHGHWVWSVSFSPNAEILASGSFDRT----VKLWDIQEG 1103

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
                  +   +      +SP    IA            +     +    + E     +  
Sbjct: 1104 RCLNTLKGHSSGVSSVSFSPNEHFIASGSVDQTA---RLWDFKTNDCICIFEGHSGQIWD 1160

Query: 395  PTWSPSGRSLIFSR 408
              +SP+G+ L  + 
Sbjct: 1161 VAFSPNGQLLATAS 1174



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 82/265 (30%), Gaps = 38/265 (14%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            ++I  G        RLW++ + + I             KI    S+ I+      KG F 
Sbjct: 998  QIIASGGGTGDRTIRLWNISNGQCI-------------KILKGHSNGIWSLAFHPKGKF- 1043

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                 ++ S +    K  L  +                 ++   FSPN + +A  ++D  
Sbjct: 1044 -----LASSGLDQSAK--LWDIHS--GECLETFQGHGHWVWSVSFSPNAEILASGSFDR- 1093

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                V L D +  R    +    S + +  FS N      S   D+   ++  D ++N  
Sbjct: 1094 ---TVKLWDIQEGRCLNTLKGHSSGVSSVSFSPNEHFIA-SGSVDQTARLW--DFKTNDC 1147

Query: 295  ERLTNTLF---INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              +         ++  ++SP+   +   S       +            I +        
Sbjct: 1148 ICIFEGHSGQIWDV--AFSPNGQLLATASL---DHTIRCWDVETHKHLAILEGHTNGVTS 1202

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVM 376
              +S  G  +  + F G      V 
Sbjct: 1203 VAFSSDGQRLISSSFDGTIKLWHVQ 1227


>gi|284052805|ref|ZP_06383015.1| WD-40 repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 487

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 83/267 (31%), Gaps = 51/267 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  + D      V L               ++ +    FS +GK  + S  
Sbjct: 1   AFSPDGQNIATTSKDH----TVKLWGID-GSLVNTFSGHQNPVWDVVFSPDGKTIV-SGS 54

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS-----QIVFESDREGKEQLYVMQ 332
            D    ++ +D   +    L +      S + SP  S      IVF    +    + +  
Sbjct: 55  NDGTAKVWGLD--GSLITTLPSQEGWVWSVAISPPDSIIRRLGIVFA-TADLANNIKLWD 111

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-------- 384
            +G+    + +  +   ++  +SP G  +A           G      +  R        
Sbjct: 112 IDGNLLYTL-EGHQQQVWNVSFSPDGKTLASVSNDKTLRLWGFEHPSLTILRGHNRGILD 170

Query: 385 ---------LLVEDSNLQAPTWSPSGRSLIFSRKKDG-------------------DTGS 416
                    ++    +     W P+G  L      DG                   D   
Sbjct: 171 AVFSEDDSFVVTGSDDKTLRIWRPNGELLQTIPTSDGGVLSVSVASQYQILATGSYDQII 230

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWV 443
           +L+ I  +G N TL+NT    + P W 
Sbjct: 231 QLWQISPDGTNITLLNTLTEHTGPVWS 257



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 92/252 (36%), Gaps = 17/252 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VV+G    +L +   +G  ++ +  S   +L     S   Q +A  +YD    L     D
Sbjct: 180 VVTGSDDKTLRIWRPNGELLQTIPTSDGGVLSVSVAS-QYQILATGSYDQIIQLWQISPD 238

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                    +      + +  FS NG+  + S   D  + ++  +      +  ++    
Sbjct: 239 GTNITLLNTLTEHTGPVWSVAFSPNGEFLV-SGSGDSTIKLW--NKDGVLLKSWSSQGQT 295

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + + S D+  I   S   G   + +   +GS ++ +S     +     +SP G  +  
Sbjct: 296 IRTIAISRDNQLIA--SGGSGGM-VKIWGVDGSLKRELSPYHRGTILGLDFSPDGRFLV- 351

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              + E   + +   +G+       D N      T+SP  + L        D  +K++S 
Sbjct: 352 --SAAEDDMVMLWDINGNLINDFKADHNDIVSDVTFSPDSQILA---TAGTDGSAKIWS- 405

Query: 422 DLNGRNETLINT 433
            L+G N  + N 
Sbjct: 406 -LDGENLAIFNG 416


>gi|255082504|ref|XP_002504238.1| U3 snoRNA-associated protein 1 Pwp2 [Micromonas sp. RCC299]
 gi|226519506|gb|ACO65496.1| U3 snoRNA-associated protein 1 Pwp2 [Micromonas sp. RCC299]
          Length = 904

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 71/192 (36%), Gaps = 10/192 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++P+   +A A  D++    V +  T            ++ + A  F+ +G  A++S  
Sbjct: 355 AYAPDGSMIATAADDNK----VKVWSTATGSCFITFTEHKAPVAAVTFAPSG-HAVVSAS 409

Query: 278 KDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  +  + + ++      LT+      IS +  P     V  +  +   Q+++      
Sbjct: 410 LDGTVRAFDL-MRYRNFRTLTSPEPAQFISLAVDPSGE--VVCAGSQDTFQIHIWSMKTG 466

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               I    +       +SP+  L+A   +  +   +  + +   Q  +L    ++ A  
Sbjct: 467 RMLDILSGHQGPVTSLSFSPESALLASGSWD-KSVRLWDVYEGRGQTDILPHAHDVLAVA 525

Query: 397 WSPSGRSLIFSR 408
           + P G+ +  S 
Sbjct: 526 FRPDGKQVAVST 537



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 73/211 (34%), Gaps = 11/211 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++     +A        ++ V+   +      ++ G++  + +   ++ +G     +   
Sbjct: 313 WNETGDWIALGCARLGQVV-VWEWQSEAYVYKQQ-GHYFDVNMC-AYAPDGSMIA-TAAD 368

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + ++S     +     T       + +++P    +V  S         +M+    + 
Sbjct: 369 DNKVKVWST-ATGSCFITFTEHKAPVAAVTFAPSGHAVVSASLDGTVRAFDLMRY--RNF 425

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           + ++  + A +      P G+++        +  I  MK     + L      + + ++S
Sbjct: 426 RTLTSPEPAQFISLAVDPSGEVVCAGSQDTFQIHIWSMKTGRMLDILSGHQGPVTSLSFS 485

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           P    L        D   +L+ +   GR +T
Sbjct: 486 PESALLA---SGSWDKSVRLWDV-YEGRGQT 512



 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 64/222 (28%), Gaps = 43/222 (19%)

Query: 167 TGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           + E   F S  +  S  VV         + +       +  +       +    FSP   
Sbjct: 430 SPEPAQFISLAVDPSGEVVCAGSQDTFQIHIWSMKTGRMLDILSGHQGPVTSLSFSPESA 489

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +A  ++D      V L D    R    I      +LA  F  +GK+  +S   D  + +
Sbjct: 490 LLASGSWDK----SVRLWDVYEGRGQTDILPHAHDVLAVAFRPDGKQVAVST-LDGQVFL 544

Query: 285 YSVD---LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           ++ +   LQ     R                        D  G + +        D +  
Sbjct: 545 WNPNDAQLQGTIEGR-----------------------RDMAGGKVI-------GDLRSA 574

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +     S+    +S  G L+      G    + +   DG   
Sbjct: 575 TAKAGKSFKTLAYSADGALLL---AGGNGKYVCMYDVDGRAL 613


>gi|225681097|gb|EEH19381.1| WD repeat domain 5B [Paracoccidioides brasiliensis Pb03]
          Length = 505

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 74/211 (35%), Gaps = 20/211 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +++       +   +FSP+   +A  + D      + + DT   R         + I
Sbjct: 151 YKEKFILQGHQLGVSAVKFSPDGSMIASCSAD----ATIKIWDTATGRLIHTFEGHLAGI 206

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIV 317
               ++ +G     S   D+++ ++ V   +        L +  +I  S ++SP  + +V
Sbjct: 207 STISWNPDGAIIA-SGSDDKSIRLWHVP--TGKPHPNPFLGHHNYI-YSVAFSPKGNMLV 262

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S     E +Y+     +   R                 G L+      G    I +  
Sbjct: 263 SGSY---DEAVYLWDVRSARVMRSLPAHSDPVAGVDVVRDGTLVVSCASDG---LIRIWD 316

Query: 378 KDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
               Q  R LV + N  + A  +SP+G+ ++
Sbjct: 317 TATGQCLRTLVHEDNPPVSAVKFSPNGKYVL 347



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 10/134 (7%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG    S+ +     G             ++   FSP    +   +YD+     VYL D 
Sbjct: 220 SGSDDKSIRLWHVPTGKPHPNPFLGHHNYIYSVAFSPKGNMLVSGSYDE----AVYLWDV 275

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFI 303
           R  R  + +      +       +G   ++S   D  + I+  D  +      L +    
Sbjct: 276 RSARVMRSLPAHSDPVAGVDVVRDGT-LVVSCASDGLIRIW--DTATGQCLRTLVHEDNP 332

Query: 304 NISAS-YSPDSSQI 316
            +SA  +SP+   +
Sbjct: 333 PVSAVKFSPNGKYV 346


>gi|168699476|ref|ZP_02731753.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 1161

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/307 (16%), Positives = 91/307 (29%), Gaps = 38/307 (12%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           RV   G D L   FRL                +  S R  A  +S  +  S+T      +
Sbjct: 495 RVTAAGLDALEPAFRL--------------NIAAWSARHAAPEVSPPLGSSVTSIAFMPD 540

Query: 175 SRILFV---SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            R L V   S +  +G +     + D DG             +     SP+  ++     
Sbjct: 541 GRRLLVGRWSTNAPAGPVPGQAQLWDTDGWTPASPPLVHGSPVLAVAVSPDGSQL----L 596

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-- 289
                  V L D +            + + A  F+ +G+            +   + +  
Sbjct: 597 TAGQDGTVQLWDAKTGNPIGAKLRDLATVHAVAFAPDGRTFAAGGGAHGTNERGEIRIWE 656

Query: 290 --QSNATERLTNTLFINISASYSPDSSQ-------IVFESDREGKEQLYVMQSNGSDQKR 340
                    +     +  + +YSPD +            S   G  Q+ +       Q  
Sbjct: 657 TGTGRPAAPVIGQPGLVAAVAYSPDGTGLASGCALPASASGPVGG-QVCLWDPKTGQQVG 715

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWS 398
            +    A+     ++P G  +      GE   + V  +   Q R L +     +      
Sbjct: 716 PTLMHAAAVRTIAFAPDGTHLV---TGGENQTVLVWDRATGQRRGLPQVCPYVVLGAAHG 772

Query: 399 PSGRSLI 405
           P GR+++
Sbjct: 773 PDGRTVL 779



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 86/319 (26%), Gaps = 33/319 (10%)

Query: 111 LVTGRVIKEGKDRLRV----EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           ++   V  +G   L        +LWD K    I  K         R +A      ++   
Sbjct: 583 VLAVAVSPDGSQLLTAGQDGTVQLWDAKTGNPIGAK--------LRDLA-----TVHAVA 629

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
               G    R             +  + + +            +  ++    +SP+   +
Sbjct: 630 FAPDG----RTFAAGGGAHGTNERGEIRIWETGTGRPAAPVIGQPGLVAAVAYSPDGTGL 685

Query: 227 AY-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           A      A+       +V L D +  +         + +    F+ +G   +      E 
Sbjct: 686 ASGCALPASASGPVGGQVCLWDPKTGQQVGPTLMHAAAVRTIAFAPDGTHLV---TGGEN 742

Query: 282 MDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQ 338
             +   D  +     L     ++ + A++ PD   ++              +     S  
Sbjct: 743 QTVLVWDRATGQRRGLPQVCPYVVLGAAHGPDGRTVLTGGGGLDHGGNCAQLWDLYSSRP 802

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
              +     +     + P G   A T     +  +           L           +S
Sbjct: 803 LGAAMAHPGAVQAVAYRPDGRGFA-TGCRDGRVRLWKCDHLRPDLELPHFGFAPTVTAYS 861

Query: 399 PSGRSLIFSRKKDGDTGSK 417
           P G+ LI +    G  G +
Sbjct: 862 PDGKWLISAGGVPGPNGGR 880



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 19/151 (12%), Positives = 40/151 (26%), Gaps = 14/151 (9%)

Query: 305 ISASYSPDSSQIVFESDREGKE------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            S ++ PD  +++               Q  +  ++G           +       SP G
Sbjct: 533 TSIAFMPDGRRLLVGRWSTNAPAGPVPGQAQLWDTDGWTPASPPLVHGSPVLAVAVSPDG 592

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             +      G    + +            L + + + A  ++P GR+        G    
Sbjct: 593 SQLLTAGQDGT---VQLWDAKTGNPIGAKLRDLATVHAVAFAPDGRTFAAGGGAHGTNER 649

Query: 417 KLYSIDLNGRNE---TLINTPAYASDPQWVG 444
               I   G       +I  P   +   +  
Sbjct: 650 GEIRIWETGTGRPAAPVIGQPGLVAAVAYSP 680


>gi|325928917|ref|ZP_08190079.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           perforans 91-118]
 gi|325540713|gb|EGD12293.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           perforans 91-118]
          Length = 775

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 52/354 (14%), Positives = 102/354 (28%), Gaps = 80/354 (22%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD----------RDG-ANI 203
           A      +Y     E G     +L   +   + I   +L + D          RDG  N 
Sbjct: 142 ARARCSKLYAKDKPEPG-----VLSPDKRSEAFIRDWNLWIRDLASGQETQLTRDGVENF 196

Query: 204 RYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-------- 252
            Y T +      +     +SP+ +K+A    D      +YL+ T++     +        
Sbjct: 197 GYATDNAGWQHTDNAILAWSPDSRKIATFQQDQRKTGDMYLVSTKLGHPELQAWKYPLAG 256

Query: 253 ------------------------------------IGNFRSMILAPRFSSNGKRALI-- 274
                                               +     +    +++ + K      
Sbjct: 257 DKDVTMIERVIIDVPTRSVLRLKTPPDQHRSTLCDDVSCSPGLWDDVKWAPDSKTLAFAS 316

Query: 275 SVQKDEAMDIYSVDLQSNATE------RLTNTLFINISASYS--PDSSQIVFESDREGKE 326
           + +  +   +   D  + A          T      ++A+++  P S++ V+ S+R    
Sbjct: 317 TSRFHKQTWLRIADASTGAVRTAFDETVKTYYESGQVAANWAYLPASNEAVWFSERSDWG 376

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKD 379
           QLY+        KR     E +  + +        A+    G           +  +  D
Sbjct: 377 QLYLYDLATGKPKRAITTGEGNVTELLRVDPVTRTAWFVGVGRSAGVDPYYQQLWKVSLD 436

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G    LL  +    +   SP G   + +          L     +GR  + I T
Sbjct: 437 GGDPVLLTPEPANHSIALSPDGARFVDTYSTSVTPPVTLLREAGDGRTVSTIAT 490


>gi|293413143|ref|ZP_06655809.1| yidR protein [Escherichia coli B354]
 gi|291468276|gb|EFF10771.1| yidR protein [Escherichia coli B354]
          Length = 416

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G +  +++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPHQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 ++ A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSVDAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPHQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       S     +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSVDAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G     LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPHQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S+  A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSVD-AVVFSPDGQWLAW 403


>gi|302887665|ref|XP_003042720.1| hypothetical protein NECHADRAFT_52111 [Nectria haematococca mpVI
           77-13-4]
 gi|256723633|gb|EEU37007.1| hypothetical protein NECHADRAFT_52111 [Nectria haematococca mpVI
           77-13-4]
          Length = 1090

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 77/205 (37%), Gaps = 17/205 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D+ L    FS    K+A A+       R+ +++    +  + + +    I A  FS +G+
Sbjct: 624 DESLASAAFSSCGTKLAIASQKG----RIMILEFGKLKCIQTLEDVD--ISAVAFSPDGE 677

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +       +  +  +      N    L        S ++ P   ++V  SD +G  +++ 
Sbjct: 678 QLATISSDEAHVWNWR--TGGNPVNVLQGHGSYTTSVAFLPKG-KLVTGSD-DGTAKIWN 733

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VED 389
           + +N  +Q   +   +AS +    S  G  +A T        I   ++   +        
Sbjct: 734 LVTNSCEQ---TLQHDASVWSVACSANGRRLA-TGSKDRTAKIWYQEEHTGKWVCTQTLQ 789

Query: 390 SNLQAPT--WSPSGRSLIFSRKKDG 412
              + PT  +SP GR LI     +G
Sbjct: 790 HKQEVPTVCFSPDGRILISGSLDNG 814



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 84/203 (41%), Gaps = 21/203 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A +         V + D  +  +  ++ NF   + +  FSS G +  I+ Q
Sbjct: 591 AFSPDGKFLAVSREKH-----VQIFDVALGTSSYQL-NFDESLASAAFSSCGTKLAIASQ 644

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           K        + L+    + +     ++ISA ++SPD  Q+   S  E    ++  ++ G 
Sbjct: 645 KGR-----IMILEFGKLKCIQTLEDVDISAVAFSPDGEQLATISSDE--AHVWNWRT-GG 696

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +   + Q   +      + P+G L+  T        I       S E+ L  D+++ +  
Sbjct: 697 NPVNVLQGHGSYTTSVAFLPKGKLV--TGSDDGTAKIW-NLVTNSCEQTLQHDASVWSVA 753

Query: 397 WSPSGRSLIFSRKKDGDTGSKLY 419
            S +GR L    K   D  +K++
Sbjct: 754 CSANGRRLATGSK---DRTAKIW 773



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 79/216 (36%), Gaps = 20/216 (9%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           FSP   KV   +       I+    M    D   + +   +  +    FS +GK   +S 
Sbjct: 544 FSPRSSKVREKFEWQVPTWIISKPEMPEHWDACVQTLHVHKRSVGPLAFSPDGKFLAVSR 603

Query: 277 QKDEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +K     +   D+    ++ +L     +  SA++S   +++   S +       +M    
Sbjct: 604 EK----HVQIFDVALGTSSYQLNFDESL-ASAAFSSCGTKLAIASQKG-----RIMILEF 653

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQA 394
              K I   ++       +SP G+ +A       +  +   +  G+   +L    S   +
Sbjct: 654 GKLKCIQTLEDVDISAVAFSPDGEQLATISSD--EAHVWNWRTGGNPVNVLQGHGSYTTS 711

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             + P G+ +        D  +K++++  N   +TL
Sbjct: 712 VAFLPKGKLV----TGSDDGTAKIWNLVTNSCEQTL 743



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 76/210 (36%), Gaps = 25/210 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISV 276
            FSP+ +++A  + D+      ++ + R    P   +    S   +  F   GK  L++ 
Sbjct: 671 AFSPDGEQLATISSDE-----AHVWNWRTGGNPVNVLQGHGSYTTSVAFLPKGK--LVTG 723

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D    I+  +L +N+ E+         S + S +  ++     ++   +++  + +  
Sbjct: 724 SDDGTAKIW--NLVTNSCEQTLQHDASVWSVACSANGRRLA-TGSKDRTAKIWYQEEHTG 780

Query: 337 DQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSN 391
                 +   +       +SP G ++           + +  + G   + L       ++
Sbjct: 781 KWVCTQTLQHKQEVPTVCFSPDGRILISGSLDNG---LRLWDEAGVCIKTLYGHTKRTTS 837

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           L  P+   +G+ L        D   KL+ I
Sbjct: 838 LSVPS---TGKLLA---SGSADGTVKLWDI 861


>gi|226292202|gb|EEH47622.1| WD repeat-containing protein 5B [Paracoccidioides brasiliensis
           Pb18]
          Length = 505

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 74/211 (35%), Gaps = 20/211 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +++       +   +FSP+   +A  + D      + + DT   R         + I
Sbjct: 151 YKEKFILQGHQLGVSAVKFSPDGSMIASCSAD----ATIKIWDTATGRLIHTFEGHLAGI 206

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIV 317
               ++ +G     S   D+++ ++ V   +        L +  +I  S ++SP  + +V
Sbjct: 207 STISWNPDGAIIA-SGSDDKSIRLWHVP--TGKPHPNPFLGHHNYI-YSVAFSPKGNMLV 262

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S     E +Y+     +   R                 G L+      G    I +  
Sbjct: 263 SGSY---DEAVYLWDVRSARVMRSLPAHSDPVAGVDVVRDGTLVVSCASDG---LIRIWD 316

Query: 378 KDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
               Q  R LV + N  + A  +SP+G+ ++
Sbjct: 317 TATGQCLRTLVHEDNPPVSAVKFSPNGKYVL 347



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 10/134 (7%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG    S+ +     G             ++   FSP    +   +YD+     VYL D 
Sbjct: 220 SGSDDKSIRLWHVPTGKPHPNPFLGHHNYIYSVAFSPKGNMLVSGSYDE----AVYLWDV 275

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFI 303
           R  R  + +      +       +G   ++S   D  + I+  D  +      L +    
Sbjct: 276 RSARVMRSLPAHSDPVAGVDVVRDGT-LVVSCASDGLIRIW--DTATGQCLRTLVHEDNP 332

Query: 304 NISAS-YSPDSSQI 316
            +SA  +SP+   +
Sbjct: 333 PVSAVKFSPNGKYV 346


>gi|332161577|ref|YP_004298154.1| oligogalacturonate lyase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318605940|emb|CBY27438.1| oligogalacturonate lyase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325665807|gb|ADZ42451.1| oligogalacturonate lyase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330859792|emb|CBX70125.1| oligogalacturonide lyase [Yersinia enterocolitica W22703]
          Length = 388

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/275 (10%), Positives = 80/275 (29%), Gaps = 41/275 (14%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V   V    +     V + D   +  +   R+       + P      +  +        
Sbjct: 116 VVYQVPDEWVGYGTWVANSDCTKLVGIEIRRED------WVPLTDWKKFHEFYFTKPCCR 169

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MDIYSVDLQSNATE 295
            +           I      +  P +   +        +         ++ ++       
Sbjct: 170 LMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR 229

Query: 296 RL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFD 351
           ++ T+    +     + PD S +V+ S  +G     +Y       + ++++     S+  
Sbjct: 230 KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLM 289

Query: 352 PVWSPQGDLIA-------FTKFSGEKFAI------GVMKK-DGSQERLLVEDSNLQ---- 393
             +   G L+                + I       V    +G+Q R+   D++ +    
Sbjct: 290 SNY--DGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEG 347

Query: 394 -------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   P+++P  + ++F+    G     L ++
Sbjct: 348 DRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 66/190 (34%), Gaps = 31/190 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
           +S + F        ++   + +++ DG N+R + T +  +      + P+   + Y +Y 
Sbjct: 200 DSTVAFC-HEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYL 258

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR------SMILAPRFSSNGKRALISVQKDEAMDI-- 284
                R            +++ +        S         +G  A + VQ D    I  
Sbjct: 259 KGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEN 318

Query: 285 ----YSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFESDREGKE 326
               Y  ++++    R+      + S               S++PD  QI+F SD  GK 
Sbjct: 319 DPFLYVFNMKNGTQHRVARH---DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKP 375

Query: 327 QLYVMQSNGS 336
            LY+     S
Sbjct: 376 ALYLATLPES 385



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 79/243 (32%), Gaps = 31/243 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
               +++    +  +D      +       P  +   R+      F+ +G + L     D
Sbjct: 1   MAKGKQIPLTFHTYQDASTGAQVTRLT---PPDVTCHRNYFYQKCFTRDGSKLLFGGAFD 57

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + Y +DL +    +LT     N    + SPD   + +  D      L  +     ++
Sbjct: 58  GPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD---GRNLMRVDLATLEE 114

Query: 339 KRIS-----QDKEASYFDPV--------------WSPQGDLIAFTKFSGEKFAIGVMKKD 379
             +           ++                  W P  D   F +F   K    +M+ D
Sbjct: 115 NVVYQVPDEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVD 174

Query: 380 ---GSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLINTP 434
              G    +L E+  L  P + P    ++ F  +   D   ++++ I+ +G N   + T 
Sbjct: 175 LKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTH 234

Query: 435 AYA 437
           A  
Sbjct: 235 AEG 237



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 79/254 (31%), Gaps = 35/254 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F+ +  K+ +     +     YL+D     A +              S +   
Sbjct: 36  NYFYQKCFTRDGSKLLFGG-AFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDA 94

Query: 272 ALISVQKDEAMDIYSVDLQS---NATERLTNTL----------------FINISAS-YSP 311
                 KD   ++  VDL +   N   ++ +                   I I    + P
Sbjct: 95  LFYV--KDGR-NLMRVDLATLEENVVYQVPDEWVGYGTWVANSDCTKLVGIEIRREDWVP 151

Query: 312 DSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
            +    F      K   +L  +     +   I Q+ +     P++ P     +AF     
Sbjct: 152 LTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQW-LGHPIYRPYDDSTVAFCHEGP 210

Query: 369 EKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  + ++ +DG+  R +    E  +     W P G +L++     G     +YS D
Sbjct: 211 HDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSAD 270

Query: 423 LNG-RNETLINTPA 435
                N  L + PA
Sbjct: 271 PETLENRQLTSMPA 284


>gi|237729015|ref|ZP_04559496.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226909637|gb|EEH95555.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 408

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 55/163 (33%), Gaps = 23/163 (14%)

Query: 279 DEAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQL 328
           +                RLT T       +      +   +P +S+I F   D  G  QL
Sbjct: 254 EGTDMTMPAPPSGIRQRRLTFTHERAFPGLVNQPRHWVRSNPKASEIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G   ++++Q          W P G  + F   +     I        +   L E
Sbjct: 314 WLISPQGGSLRQLTQCATNIQSAFNWHPSGKWLGFVLEN----RIACCDVQTGEIDFLTE 369

Query: 389 DSNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             +   P+     +SP GR + +    +G    +L+ +   GR
Sbjct: 370 -RHDNPPSADAIVFSPDGRQVAWMEDVEGFR--QLW-VTETGR 408



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 60/154 (38%), Gaps = 12/154 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             +  SGI +  L          R      +Q     R +P   ++A+   DD  I++++
Sbjct: 260 MPAPPSGIRQRRLTFTH-----ERAFPGLVNQPRHWVRSNPKASEIAFLMRDDNGIVQLW 314

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L+  +     +      ++  A  +  +GK     ++      I   D+Q+   + LT  
Sbjct: 315 LISPQGGSLRQLTQCATNIQSAFNWHPSGKWLGFVLEN----RIACCDVQTGEIDFLTER 370

Query: 301 LFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
                SA    +SPD  Q+ +  D EG  QL+V 
Sbjct: 371 HDNPPSADAIVFSPDGRQVAWMEDVEGFRQLWVT 404


>gi|196231654|ref|ZP_03130512.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
 gi|196224507|gb|EDY19019.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
          Length = 521

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/290 (14%), Positives = 93/290 (32%), Gaps = 14/290 (4%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
            +       A    D  +  I        S       S+++    + + +   DG+ +  
Sbjct: 136 GAVDDTPPNARQRFDADHPPIYQRPPVITSLAYSPDGSLLAVAGFHEILLWKADGSELVA 195

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +   RFSP+ +++A A      +  V + D    +    +      +    +
Sbjct: 196 RLIGLSERIQSVRFSPDGKRLAAAGGRPAQMGEVQIWDVEKRKLALSVPVGYDTVYGVNW 255

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFE-SDRE 323
           S +GK             + ++D ++     + T+     +  +++    Q+V    D  
Sbjct: 256 SPDGKMVSF---GCPDNTLRAIDSETGKQVLQGTSHSDWVLDTTFTHKGDQLVSVGRDMS 312

Query: 324 GKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSG--EKFAI--GVMKK 378
            K      Q    +   I+              P+ D        G  + + I   V ++
Sbjct: 313 AKLTEVASQRFIDNISSITPGALRGGLQTVSRHPERDEFLVGGADGVPQAYRIVRKVQRR 372

Query: 379 DGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            G    L+ +    +  + A  ++P G+S +     DG      Y+ D N
Sbjct: 373 IGDNALLIRKWPAMEGRIYAMRFAPDGKSFVAGSSLDGTGQVNFYNYDFN 422



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 51/142 (35%), Gaps = 16/142 (11%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S +YSPD S +       G  ++ + +++GS+                +SP G  +A  
Sbjct: 164 TSLAYSPDGSLLA----VAGFHEILLWKADGSELVARLIGLSERIQSVRFSPDGKRLAAA 219

Query: 365 KFSG---EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   +  I  ++K      + V    +    WSP G+ + F     G   + L +I
Sbjct: 220 GGRPAQMGEVQIWDVEKRKLALSVPVGYDTVYGVNWSPDGKMVSF-----GCPDNTLRAI 274

Query: 422 DLNGRNETLINTPAYASDPQWV 443
           D     + L  T    S   WV
Sbjct: 275 DSETGKQVLQGT----SHSDWV 292


>gi|171915764|ref|ZP_02931234.1| serine/threonine-protein kinase [Verrucomicrobium spinosum DSM
           4136]
          Length = 1229

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 69/228 (30%), Gaps = 38/228 (16%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQ 277
           P+ + +A        + R              +G       AP   R SS+G R      
Sbjct: 602 PDGKWLAVTVAGGPRVFR--------TVPRAAVGPVLEGAPAPTLLRLSSDGCRLA---- 649

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +   +   D +S      ++ L   +S    SPD +++   S R G   L V   +  
Sbjct: 650 GADGSSLKVWDARSGKLILSSHDLEGPVSHIEMSPDGTRLATVSGRTGGT-LDVWDVDLG 708

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQA 394
            + R S        D  +SP+G  +A          F +          R       +  
Sbjct: 709 SRMRPSFRPGGKLLDCSFSPEGRRLAIASHDSYARVFDVASGLPLTESMR---HSGAVME 765

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             +S  GR +  S    G+  ++++                Y   P W
Sbjct: 766 VHFSGDGRRVATSAV--GELNARIWD--------------GYTGLPAW 797



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 64/214 (29%), Gaps = 13/214 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G   +SL V D     +   +   +  +     SP+  ++A  +      L V+ +D  
Sbjct: 649 AGADGSSLKVWDARSGKLILSSHDLEGPVSHIEMSPDGTRLATVSGRTGGTLDVWDVDLG 708

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLF 302
               P         +L   FS  G+R  I+     A      D+ S     LT       
Sbjct: 709 SRMRPS--FRPGGKLLDCSFSPEGRRLAIASHDSYAR---VFDVASGLP--LTESMRHSG 761

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             +   +S D  ++   +   G+    +                +S      S  G  + 
Sbjct: 762 AVMEVHFSGDGRRVA--TSAVGELNARIWDGYTGLPAWPWICHPSSNPCARISANGRFVL 819

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            T        +     +G+ +      + + + +
Sbjct: 820 -TGGEDRALRLWSTPVEGAAKVTANHGAKVVSVS 852



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 74/228 (32%), Gaps = 32/228 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+  +VA  T D        L      +           I   RF ++    L+ + +
Sbjct: 514 FSPDGSRVAIITSDG----TAQLWSCETLQPASPPLTAPGGIRWIRF-TDDPGVLLGLSR 568

Query: 279 DEAMDIYSVDLQSNATERLTNTLFI----NISASYS--PDSSQIVFESDREGKEQLYVMQ 332
           +     +  DL S     LT+T  I      S+++   PD   +       G  +++   
Sbjct: 569 EGLFCEW--DLPSGV---LTSTPIIPGPAPTSSAWDLTPDGKWLAVTV--AGGPRVFRTV 621

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
              +    +  +   +      S  G  +A     G    +     D    +L++   +L
Sbjct: 622 PRAAVGPVL--EGAPAPTLLRLSSDGCRLA--GADGSSLKVW----DARSGKLILSSHDL 673

Query: 393 QAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           + P      SP G  L     + G T   ++ +DL G        P  
Sbjct: 674 EGPVSHIEMSPDGTRLATVSGRTGGT-LDVWDVDL-GSRMRPSFRPGG 719



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 13/208 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VSG    +L V D D  +    +      L +  FSP  +++A A++D        + D
Sbjct: 691 TVSGRTGGTLDVWDVDLGSRMRPSFRPGGKLLDCSFSPEGRRLAIASHDS----YARVFD 746

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLF 302
                           ++   FS +G+R   S   +    I+  D  +            
Sbjct: 747 VASGLPLTESMRHSGAVMEVHFSGDGRRVATSAVGELNARIW--DGYTGLPAWPWICHPS 804

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            N  A  S +  + V     +   +L+     G+ +  ++ +  A          G LI 
Sbjct: 805 SNPCARISANG-RFVLTGGEDRALRLWSTPVEGAAK--VTANHGAKVVSVSQGTAGRLIL 861

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDS 390
               +G    + +  +       L++ S
Sbjct: 862 ---SAGADGLVRLWNRTTGDLTALIQPS 886



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 66/216 (30%), Gaps = 13/216 (6%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            R G  +        Q + + +FS + ++     +       + L + R  +   R     
Sbjct: 916  RTGEPVLPELHHGGQRVIQLQFSASGEEF----FSLGGEGSLKLWNRRTGKPLARQLEQT 971

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQ 315
              ++   + + G+R L +   +  +  +  D++S      ++     ++   ++S D  +
Sbjct: 972  GTLIRATYDATGERLL-AADTEHNVGCW--DVRSGRPSGRKIRLPRRVD-HLAFSADGKR 1027

Query: 316  IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             +  S   G      +    +             F    S  G  +  T  +     I  
Sbjct: 1028 WLTAS--LGNGSFAQVWDATTFLPVGPMLAPGRTFCAALSRDGASVV-TCGADNTARIWN 1084

Query: 376  MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                G   R +     +    +SP GR +       
Sbjct: 1085 ASSGGRIGRNMTHSGPIFRSIFSPDGRMVATCSDDG 1120


>gi|168703020|ref|ZP_02735297.1| serine/threonine protein kinase [Gemmata obscuriglobus UQM 2246]
          Length = 801

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 105/304 (34%), Gaps = 34/304 (11%)

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           V  R  DV        ++  ++P             I   + GE G   +     +  +V
Sbjct: 481 VTLRGIDVASG---AARRTTTNPE----------PKIV--LRGESGAVWAITFLDNNQLV 525

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G+   ++ + D     +R      D       ++ +            D   V   + +
Sbjct: 526 MGMESGTVKIWDWQRGTVRNELNHPDGNSGNI-WAADACLKCKYLMVASDDSAVTFWNLQ 584

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             + P+      +      FS NGK    +  ++  + I+  D  +N             
Sbjct: 585 NVQRPEFSFPESTSTKTAAFSPNGKYLA-TGSRNSQVKIW--DWANNIAVVKLQHRGTVH 641

Query: 306 SASYSPDSSQIVFESDREGKEQLY------VMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S +Y+PD +Q+   +  +GK +++       +   G+ +       +   +  V+SP G 
Sbjct: 642 SVAYNPDGTQLA-SAGSDGKVKVWNLKNVNWINGEGAVESVDLAQHKGGVYSVVFSPDGS 700

Query: 360 LIAFTKFSGEKFAIGVMKK-DGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            IA   + G    + +    +G+Q + +   D +  + ++  +G+ +        D   K
Sbjct: 701 RIASAGWDG---YVRIWDAVNGTQLQPIKAHDLDAWSVSFGNNGKWVA---SAGSDGFVK 754

Query: 418 LYSI 421
           ++ +
Sbjct: 755 VWDV 758



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/188 (12%), Positives = 61/188 (32%), Gaps = 11/188 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYL 241
           +G   + + + D    NI  +       +    ++P+  ++A A  D +    ++  V  
Sbjct: 613 TGSRNSQVKIWDW-ANNIAVVKLQHRGTVHSVAYNPDGTQLASAGSDGKVKVWNLKNVNW 671

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++         +   +  + +  FS +G R   S   D  + I+   +     + +    
Sbjct: 672 INGEGAVESVDLAQHKGGVYSVVFSPDGSRIA-SAGWDGYVRIWDA-VNGTQLQPIKAHD 729

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S S+  +   +       G +    +    +  +  S     +Y    ++  G  +
Sbjct: 730 LDAWSVSFGNNGKWVA----SAGSDGFVKVWDVETGAEVFSFHGPTAYHVVRFARDGTTL 785

Query: 362 AFTKFSGE 369
           A     G 
Sbjct: 786 AAGGRDGT 793


>gi|282879836|ref|ZP_06288564.1| dipeptidyl peptidase IV domain protein [Prevotella timonensis CRIS
           5C-B1]
 gi|281306301|gb|EFA98333.1| dipeptidyl peptidase IV domain protein [Prevotella timonensis CRIS
           5C-B1]
          Length = 734

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 59/172 (34%), Gaps = 26/172 (15%)

Query: 288 DLQSNA--TERLTNT---LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+   A   ERLT        +  AS S D  +IV  S + GK+   +     +    I 
Sbjct: 28  DIADGAFAAERLTGIRPIPGTDQYASISKDGQRIVQYSFKTGKQTAVLFDVKHTMGSTI- 86

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQAPT 396
                S+     SP G  +     +   +         +     ++   L E    Q PT
Sbjct: 87  ----DSFDGYELSPDGTKMLIQTATERIYRRSFKANYYIYTVASTKLEPLSEGGKQQVPT 142

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYS-----IDLNGRNETLINTPAYASDPQWV 443
           WS  G+ + F R  +      LY      +  +GR   +IN       P WV
Sbjct: 143 WSADGKQIAFVRNNNLHLIKLLYDNAESQVTKDGRFNEIIN-----GIPDWV 189



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 49/152 (32%), Gaps = 20/152 (13%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                    S +G+R +    K         D++      + +     +    SPD +++
Sbjct: 46  PGTDQYASISKDGQRIVQYSFKTGKQTAVLFDVKHTMGSTIDSFDGYEL----SPDGTKM 101

Query: 317 VFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           + ++       R  K   Y+     +  + +S+  +     P WS  G  IAF + +   
Sbjct: 102 LIQTATERIYRRSFKANYYIYTVASTKLEPLSEGGKQQV--PTWSADGKQIAFVRNNNLH 159

Query: 371 FAIGVMKKDGSQERLLVEDSNLQA-----PTW 397
               +     + E  + +D          P W
Sbjct: 160 LIKLLYD---NAESQVTKDGRFNEIINGIPDW 188



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 76/236 (32%), Gaps = 32/236 (13%)

Query: 220 SPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           SP+  K+              +       +        +       P +S++GK+     
Sbjct: 95  SPDGTKMLIQTATERIYRRSFKANYYIYTVASTKLEPLSEGGKQQVPTWSADGKQIAFVR 154

Query: 277 QKDEAMDIYSVDLQSNATER------LTNTL---------FINISASYSPDSSQIVFESD 321
             +  +     D   +   +      + N +           N S  ++ D ++I +   
Sbjct: 155 NNNLHLIKLLYDNAESQVTKDGRFNEIINGIPDWVNEEEFGTNRSFCFNADGTKICWIKY 214

Query: 322 REGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            E K + Y +Q   GS   ++  D+    +   +   G           + ++       
Sbjct: 215 DESKVKSYSLQLFKGSHPTQMQYDEYPGLYTYKYPKAG-------QDNAQVSVWSFDVKS 267

Query: 381 SQERLL--VEDSNLQAPTWSPS---GRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            Q R L    +++   P   P+    R L+++  +  D    L++++ +    TL+
Sbjct: 268 HQTRQLQVPLEADGYIPRIKPTNDPNRILVYTMNRHQD-ELNLFAVNPSSTVATLL 322


>gi|225684977|gb|EEH23261.1| WD repeat protein [Paracoccidioides brasiliensis Pb03]
          Length = 787

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 63/195 (32%), Gaps = 17/195 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  K+A           V + D        R+ +    +    +S +  +  IS   
Sbjct: 475 FSHDGTKLA----TAGRENLVIIYDVATFAVIHRLTDHGGSVAYATWSPDDTKL-ISCSH 529

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D    ++  D+++     LT  +      SA+++PDS   V     + + QL +    G 
Sbjct: 530 DYKARLW--DVETGRCI-LTIDHHHEPVTSAAWAPDSESFV-TGSLDSQSQLCLWSVVGE 585

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAP 395
                         D   SP G  +           + V   +   +E  +    +L   
Sbjct: 586 SL--YKWSGNYRVRDCSISPDGRRLVAISTEKS---VYVYNFETRVEEYSMTLKLDLTCV 640

Query: 396 TWSPSGRSLIFSRKK 410
             S   R ++ S  +
Sbjct: 641 NISRDSRYMLLSTSE 655



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 47/135 (34%), Gaps = 6/135 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   +N + + D     + +        +    +SP+  K+   ++D +      L D  
Sbjct: 484 TAGRENLVIIYDVATFAVIHRLTDHGGSVAYATWSPDDTKLISCSHDYK----ARLWDVE 539

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R    I +    + +  ++ + +   ++   D    +    +   +  +  +  +   
Sbjct: 540 TGRCILTIDHHHEPVTSAAWAPDSES-FVTGSLDSQSQLCLWSVVGESLYKW-SGNYRVR 597

Query: 306 SASYSPDSSQIVFES 320
             S SPD  ++V  S
Sbjct: 598 DCSISPDGRRLVAIS 612


>gi|52425795|ref|YP_088932.1| hypothetical protein MS1740 [Mannheimia succiniciproducens MBEL55E]
 gi|52307847|gb|AAU38347.1| unknown [Mannheimia succiniciproducens MBEL55E]
          Length = 392

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 48/259 (18%), Positives = 71/259 (27%), Gaps = 77/259 (29%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           PK +   R+      F+ +GK+ L +   D   + Y +DLQS    +LT     N    +
Sbjct: 33  PKDVTCHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLDLQSQEAIQLTEGKGDNTFGGF 92

Query: 310 -SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--------- 359
            S D     +  +      L  +     ++K I    E       W    D         
Sbjct: 93  ISHDDKFFFYVKNES---SLRKVDLATLEEKVIYTVDENWKGYGTWVANSDCTKLVGIEI 149

Query: 360 -------------LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---------- 396
                          AF   +     I V    G  E +L ++  L  PT          
Sbjct: 150 LKSCWQPLTDWDKFKAFYHTNPTCRLIKVDILTGDLEVVLQDNVWLGHPTYRPFDDSIVG 209

Query: 397 ----------------------------------------WSPSGRSLIFSRKKDGDTGS 416
                                                   W P G  +I+     G T  
Sbjct: 210 FCHEGPHDLVDARMWFVNEDGTNVRKAKEHQEGESCTHEFWVPDGSKMIYVSYFKGQTER 269

Query: 417 KLYSIDLNG-RNETLINTP 434
            +YS+D N   N  LI  P
Sbjct: 270 VIYSVDPNTLENTRLITMP 288



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 28/189 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYAT 230
            F+  I+         ++   +  ++ DG N+R     ++        + P+  K+ Y +
Sbjct: 202 PFDDSIVGFCHEGPHDLVDARMWFVNEDGTNVRKAKEHQEGESCTHEFWVPDGSKMIYVS 261

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-------------ISV 276
           Y      R +Y +D       + I       L   F  NG   +              S 
Sbjct: 262 YFKGQTERVIYSVDPNTLENTRLITMPPCSHLMSNF--NGNLLIGDGCDSPVDVADSDSY 319

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLF-----------INISASYSPDSSQIVFESDREGK 325
             +    +Y  +++   T +L                 +   S++P+ S ++F SD EG+
Sbjct: 320 NIENDPFLYLFNIEKQRTVKLAKHSSSWQVLDGDRQITHPHPSFNPNDSAVLFGSDFEGR 379

Query: 326 EQLYVMQSN 334
             +Y+   +
Sbjct: 380 PAIYLADIS 388


>gi|332664867|ref|YP_004447655.1| Dipeptidyl-peptidase IV [Haliscomenobacter hydrossis DSM 1100]
 gi|332333681|gb|AEE50782.1| Dipeptidyl-peptidase IV [Haliscomenobacter hydrossis DSM 1100]
          Length = 730

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 50/319 (15%), Positives = 103/319 (32%), Gaps = 67/319 (21%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILRV 239
           S  V     +    V+D D   ++ L  +     L   +FSP+  KVAY +   +  L V
Sbjct: 101 SVRVWRMDTRGDYWVLDLDKKTLKQLGANLPVSSLMFAKFSPDGSKVAYVS---KHNLYV 157

Query: 240 YLMDTRIDRAPKRIGNFRSMIL--------------APRFSSNGKRALIS---------- 275
             +         + G  + +                  R+S +G                
Sbjct: 158 ENLADSKTTQLTKDGTDKIINGTFDWAYEEEFFCRDGFRWSPDGNNIAYWQIDATAVKYF 217

Query: 276 --VQKDEAMDIYSVDLQS------------------NATERLTNTLFINISA-----SYS 310
             +   +++  Y++ ++                       R  N    N        S++
Sbjct: 218 LMMNTTDSIYSYTIPVEYPKVGETPSACRVGIVPVKGGATRWMNVPGDNRQHYIPRMSWA 277

Query: 311 PDSSQIVF-ESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--------GDL 360
            ++++IV  + DR +   ++++        K I ++K+ ++ D    P         G  
Sbjct: 278 ANATEIVLQQLDRKQQVSKIFLCNITNGTAKVILEEKDEAWVDVHLDPNQDWDWINGGKE 337

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGR--SLIFSRKKDGDTGSK 417
             +            + +DG QE+L+     ++  P      +   + F    D  T   
Sbjct: 338 FLWLTEKDGWRHYYRVSRDGKQEKLITAGNYDVIDPGMI-DEKNNVVYFIASPDNATEKY 396

Query: 418 LYSIDLNGRNETLINTPAY 436
           LY  +L+G  +    +PA 
Sbjct: 397 LYKTNLDGSGKAERLSPAN 415


>gi|310820063|ref|YP_003952421.1| hypothetical protein STAUR_2796 [Stigmatella aurantiaca DW4/3-1]
 gi|309393135|gb|ADO70594.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 482

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 80/271 (29%), Gaps = 48/271 (17%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G    + L V+ +        +  V   +            +    PR+S +   VA+  
Sbjct: 117 GGRTCQSLHVAVTSTGAAGTQATAVRHDETTTAPVALSESTETNRFPRWSADGSAVAFVE 176

Query: 231 YDDEDILRVYLMDTR----------IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
             +       +  T                    +F  +   P  S      L+  +K  
Sbjct: 177 GAEGVGTSRLVSRTLPLTAGQSTVLTSGTAAETEDFPQLEWWPSRS------LVWTKKSG 230

Query: 281 AMD--IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           A    ++SV         LT +    +  S++ + + + + ++ EG   L    + G   
Sbjct: 231 ASTSGLWSVPGAGGTAVALTASG---VFPSWASNGTSLAYSTNAEGVMTL----TPGQPA 283

Query: 339 KRIS--QDKEASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLL---- 386
             ++     E  Y +       D + + K +G        + I  +   G     +    
Sbjct: 284 AAVTGGTGGEQPYHNQA----NDWLLYAKANGSDAVIGPLYEIFTLSPTGGTINPIANTS 339

Query: 387 ---VEDSNLQAP----TWSPSGRSLIFSRKK 410
                  ++ +     TW+P G  + + R  
Sbjct: 340 SEPTSGGSVDSYIANQTWAPDGTWVAYVRTY 370



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/251 (13%), Positives = 76/251 (30%), Gaps = 39/251 (15%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----A 281
           VA  +          +       AP  +         PR+S++G         +      
Sbjct: 126 VAVTSTGAAGTQATAVRHDETTTAPVALSESTETNRFPRWSADGSAVAFVEGAEGVGTSR 185

Query: 282 MDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESDRE-GKEQLYVMQSNGS 336
           +   ++ L +  +  LT+             + P S  +V+          L+ +   G 
Sbjct: 186 LVSRTLPLTAGQSTVLTSGTAAETEDFPQLEWWP-SRSLVWTKKSGASTSGLWSVPGAGG 244

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               ++    AS   P W+  G  +A++  +     +      G     +   +  + P 
Sbjct: 245 TAVALT----ASGVFPSWASNGTSLAYSTNAEGVMTL----TPGQPAAAVTGGTGGEQPY 296

Query: 397 WSPSGRSLIFSRKKDGDTG----SKLYSIDLNGRNETLI------NTPA----------- 435
            + +   L++++    D       +++++   G     I       T             
Sbjct: 297 HNQANDWLLYAKANGSDAVIGPLYEIFTLSPTGGTINPIANTSSEPTSGGSVDSYIANQT 356

Query: 436 YASDPQWVGFM 446
           +A D  WV ++
Sbjct: 357 WAPDGTWVAYV 367


>gi|312199734|ref|YP_004019795.1| Serine/threonine-protein kinase-like domain protein [Frankia sp.
           EuI1c]
 gi|311231070|gb|ADP83925.1| Serine/threonine-protein kinase-like domain protein [Frankia sp.
           EuI1c]
          Length = 925

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 64/214 (29%), Gaps = 8/214 (3%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               V    T    A + +    S +     S NG+    S   D    ++  D  +   
Sbjct: 610 QPANVPPAQTSGFHAARTLSGHTSRVQGVAVSPNGRTVA-SASDDGTARLW--DESTGQQ 666

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             +       +S ++SPD S +   ++        V   +   Q           +   +
Sbjct: 667 LAVLPGSGKQVSVAFSPDGSLLAVTAENRSVGLWRVSSPSSPQQVGTLTGFGGEVWAVAF 726

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKK 410
           SP G  I  T  +     +  +  D S  + L      D+ +    +SP+GR+L    ++
Sbjct: 727 SPLGGGILATGSADGTIRLWNV-ADPSSPQQLSSVNPGDNQIWTVEFSPNGRTLASGSQR 785

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                  +      G   TL           +  
Sbjct: 786 GQIRLWNVADASSPGMFGTLSGHTGVVMSVAFSP 819



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 61/389 (15%), Positives = 113/389 (29%), Gaps = 48/389 (12%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFK 88
           P + H+       S + +  S A     S    G  V+ V+                   
Sbjct: 559 PAATHSLADTEAASGSPAAGSSAAPGGTSNGGSGA-VAPVIPA---------PNDPGGQN 608

Query: 89  QKITN--PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF------RLWDVKDRKQII 140
            +  N  P     F    +L         V      R           RLWD    +Q+ 
Sbjct: 609 DQPANVPPAQTSGFHAARTLSGHTSRVQGVAVSPNGRTVASASDDGTARLWDESTGQQLA 668

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
                  P S ++++   S D             S +   +E+   G+ +    V     
Sbjct: 669 -----VLPGSGKQVSVAFSPD------------GSLLAVTAENRSVGLWR----VSSPSS 707

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                        ++   FSP    +      D  I    + D    +    +    + I
Sbjct: 708 PQQVGTLTGFGGEVWAVAFSPLGGGILATGSADGTIRLWNVADPSSPQQLSSVNPGDNQI 767

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFE 319
               FS NG+      Q+ +       D  S      L+    + +S ++SPD + +   
Sbjct: 768 WTVEFSPNGRTLASGSQRGQIRLWNVADASSPGMFGTLSGHTGVVMSVAFSPDGATLA-- 825

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
               G     +   + S Q+ +S     +  ++ V++P G  +A            +   
Sbjct: 826 ---SGSTDATMRTWSVSGQRLLSTRGFNNEVWEVVFAPGGGTVAVACRDQTVQVWNLANP 882

Query: 379 D--GSQERLLVEDSNLQAPTWSPSGRSLI 405
               S   L      + +  W P GR+++
Sbjct: 883 QSPSSVATLNGHGDLVSSVAWVPGGRTIV 911


>gi|302339305|ref|YP_003804511.1| collagen [Spirochaeta smaragdinae DSM 11293]
 gi|301636490|gb|ADK81917.1| Collagen triple helix repeat protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 1203

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 28/222 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S N Q +         +   Y  +        R+    +   +  FSS+G     S  
Sbjct: 485 AWSANDQYLVITGNYAGHM---YKRNEDTFNLLGRLEGIDNTSRSVCFSSDGNYLACSSG 541

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQ-IVFESDREGK-EQLYVMQ 332
               +  Y      +   R + +  IN +A   S S D +  +   S   G+ + LY+ +
Sbjct: 542 SGNLLKAYK--RSGDVFSRYSLSYTINANAKALSLSSDGTYLMATVSGYGGEIDGLYLFK 599

Query: 333 SNGSDQKRIS----QDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +NGS+ + ++     D + SYF  V +S   + IAF    G +  + + K+ G   + + 
Sbjct: 600 NNGSEYRLLTIIHHYDIDNSYFYSVEFSHNDNYIAF----GTRHGVMIYKRVGDNLQKVT 655

Query: 388 E-----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +     DS + +  WSP+ R L F+    G T   +Y  D +
Sbjct: 656 DVEAENDSVIYSVHWSPNDRYLFFT----GATRPSIYRRDGD 693



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 61/189 (32%), Gaps = 10/189 (5%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V++G     +   + D  N+       D       FS +   +A  +    ++L+ Y   
Sbjct: 494 VITGNYAGHMYKRNEDTFNLLGRLEGIDNTSRSVCFSSDGNYLA-CSSGSGNLLKAYKRS 552

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLT--N 299
             +           +   A   SS+G   + +V         +Y      +    LT  +
Sbjct: 553 GDVFSRYSLSYTINANAKALSLSSDGTYLMATVSGYGGEIDGLYLFKNNGSEYRLLTIIH 612

Query: 300 TLFIN----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
              I+     S  +S + + I F   R G      +  N      +  + ++  +   WS
Sbjct: 613 HYDIDNSYFYSVEFSHNDNYIAF-GTRHGVMIYKRVGDNLQKVTDVEAENDSVIYSVHWS 671

Query: 356 PQGDLIAFT 364
           P    + FT
Sbjct: 672 PNDRYLFFT 680



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 64/199 (32%), Gaps = 12/199 (6%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEAMDIYSVDLQSN-ATERLT 298
             I    + I      I    FS +G    I    S  +D    IY  +  S     +L 
Sbjct: 413 IEIKELTQTIIRNTQAIGDVSFSKSGNYLAIVCAGSQGQDNGTFIYKKNAGSFFLLTKLV 472

Query: 299 NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            +   +   +   +S +   +V   +  G   +Y    +  +     +  + +     +S
Sbjct: 473 PSASESYQPTNIAWSANDQYLVITGNYAG--HMYKRNEDTFNLLGRLEGIDNTSRSVCFS 530

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G+ +A +  SG          D      L    ++N +A + S  G  L+ +    G 
Sbjct: 531 SDGNYLACSSGSGNLLKAYKRSGDVFSRYSLSYTINANAKALSLSSDGTYLMATVSGYGG 590

Query: 414 TGSKLYSIDLNGRNETLIN 432
               LY    NG    L+ 
Sbjct: 591 EIDGLYLFKNNGSEYRLLT 609


>gi|288802453|ref|ZP_06407892.1| dipeptidyl aminopeptidase IV [Prevotella melaninogenica D18]
 gi|288334981|gb|EFC73417.1| dipeptidyl aminopeptidase IV [Prevotella melaninogenica D18]
          Length = 736

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 89/309 (28%), Gaps = 72/309 (23%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDD-- 233
             + L V D  G   +  T     I++                +SP   ++A+   D   
Sbjct: 159 KDHQLYVTDAKGTEHQLTTDGSRDIVYGQSVHRDEFGINGGLYWSPKGNRLAFYRMDQSM 218

Query: 234 -------------------------------------EDILRVYLMDTRIDRAPKRIGNF 256
                                                   + V + D    +        
Sbjct: 219 VADYPLVDVPELDWKPTKGESRAAKVDLIKYPMAGETSHKVTVGVYDLTTSKTVYLQTGD 278

Query: 257 RSMILAP--RFSSNGKRAL-ISVQKDEAM-DIYSVDLQSN----ATERLTNTLFINISA- 307
            +        +S + K      + +D+    + S D  +        R T+  +  +   
Sbjct: 279 PTDCYFTNITWSPDEKTVYMFELNRDQNDCRLVSYDAATGAKLKELYRETDAKY--VEPC 336

Query: 308 ---SYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               + P + ++ + +S ++G   LY+   +G   K+I+  K        ++ +   I +
Sbjct: 337 HPIQFLPWNGNEFILQSQKDGYNHLYLFNKDGRQLKQITSGKWVVLEVLGFNSKQKSIVY 396

Query: 364 TKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY-S 420
                +  +    ++     +  LL        P  S  G +++        +  + Y  
Sbjct: 397 VSNECNPIQRNAWLVNIASGKRTLLDNGRGYHYPKLSEDGNAVM--DNYSEPSVPRKYEI 454

Query: 421 IDLNGRNET 429
           I LNG+ + 
Sbjct: 455 ISLNGKPQR 463



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 85/230 (36%), Gaps = 17/230 (7%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT----PSRDQILFEPRFSPNQQK 225
           KG+  +  + + +  ++G   + + V   D    + +        D       +SP+++ 
Sbjct: 236 KGESRAAKVDLIKYPMAGETSHKVTVGVYDLTTSKTVYLQTGDPTDCYFTNITWSPDEKT 295

Query: 226 VA-YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL----AP-RFSS-NGKRALISVQK 278
           V  +    D++  R+   D       K +             P +F   NG   ++  QK
Sbjct: 296 VYMFELNRDQNDCRLVSYDAATGAKLKELYRETDAKYVEPCHPIQFLPWNGNEFILQSQK 355

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D    +Y  +      +++T+  ++ +    ++     IV+ S+     Q      N + 
Sbjct: 356 DGYNHLYLFNKDGRQLKQITSGKWVVLEVLGFNSKQKSIVYVSNECNPIQRNAWLVNIAS 415

Query: 338 QKRISQDKEASYFDPVWSPQGDLIA--FTKFS-GEKFAIGVMKKDGSQER 384
            KR   D    Y  P  S  G+ +   +++ S   K+ I  +  +G  +R
Sbjct: 416 GKRTLLDNGRGYHYPKLSEDGNAVMDNYSEPSVPRKYEI--ISLNGKPQR 463


>gi|114668577|ref|XP_001149425.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
          Length = 428

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 158 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 217

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 218 RGHQNWVYSCAFSPDSSILC---SVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 274

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 275 GALLATASYDT---RVYIWDPHNGD--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 329

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 330 GLHVA---SLADDKMVRFWRIDED 350



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 80/259 (30%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++           R +  T + D               ++ VS S   
Sbjct: 158 RIKIWDVYTGKLLL--NLVDHTEVVRDL--TFAPD-------------GSLILVSASRDK 200

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L +   
Sbjct: 201 TL---RVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSILCSV----GASKAVFLWNMDK 252

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + I+  D  +               
Sbjct: 253 YTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFPPPT 309

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   +   +D +   + + +  +     +++          
Sbjct: 310 PIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 364

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 365 AFSTDGSVLAAGTHDGSVY 383



 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L +   +    +++PD S I+  + R+   +++ 
Sbjct: 149 LLATGLNNGRIKIW--DVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWD 206

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K + +  +   +   +SP   ++     S   F +  M K     +L     
Sbjct: 207 LKDDGNMMKVL-RGHQNWVYSCAFSPDSSILCSVGASKAVF-LWNMDKYTMIRKLEGHHH 264

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 265 DVVACDFSPDGALLATASY 283



 Score = 36.9 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 4/99 (4%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 156 NGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 215

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +L    N   +  +SP   S++ S          L+++D
Sbjct: 216 VLRGHQNWVYSCAFSPDS-SILCS--VGASKAVFLWNMD 251


>gi|291221913|ref|XP_002730964.1| PREDICTED: WD repeat and SOCS box-containing 1-like [Saccoglossus
           kowalevskii]
          Length = 427

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 94/274 (34%), Gaps = 26/274 (9%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            V +  +  + + +  ++V  +++++      S        H    +I   +   K    
Sbjct: 117 SVPERARKNINIHYTRFNVGKKEELVLATGLHSGRIKTWDIHK--GEILHYLIDHKEVIR 174

Query: 175 SRILFVSESV--VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
                   S+  VS     +L V D  D  N+        + +F   FSP+ + +     
Sbjct: 175 DLAFAPDGSLMLVSASRDKTLKVWDLNDDGNMAITLKGHPKWVFGCCFSPDTKLLVSVGS 234

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
               IL   L   +     KR+    + ++A RFS +G     +   D  + ++  D  +
Sbjct: 235 GKSIILWKVLNLPKDLVLWKRLDGHYNDVVACRFSPDGALLA-TASWDTRVIVW--DPYT 291

Query: 292 NATERLTNTLFINISA--------------SYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               ++   +F   S               S+SPD S +   S  + K   +    +   
Sbjct: 292 GEKLKIFGHVFPPPSPIFAGGANDTWVRDVSFSPDGSHVA--SIADDKYVRFWSLFDTQI 349

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            ++I+           +SP G ++A    +G  F
Sbjct: 350 PEQIAIVPNG--LCCAYSPGGGVLATGTRNGNVF 381



 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 17/186 (9%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              R+   D         + + + +I    F+ +G   L+S  +D+ + ++ ++   N  
Sbjct: 148 HSGRIKTWDIHKGEILHYLIDHKEVIRDLAFAPDGSLMLVSASRDKTLKVWDLNDDGNMA 207

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--- 351
             L           +SPD+  +V  S   GK  +     N      + +  +  Y D   
Sbjct: 208 ITLKGHPKWVFGCCFSPDTKLLV--SVGSGKSIILWKVLNLPKDLVLWKRLDGHYNDVVA 265

Query: 352 PVWSPQG----------DLIAFTKFSGEKFAI--GVMKKDGSQERLLVEDSNLQAPTWSP 399
             +SP G           +I +  ++GEK  I   V             D+ ++  ++SP
Sbjct: 266 CRFSPDGALLATASWDTRVIVWDPYTGEKLKIFGHVFPPPSPIFAGGANDTWVRDVSFSP 325

Query: 400 SGRSLI 405
            G  + 
Sbjct: 326 DGSHVA 331


>gi|281425700|ref|ZP_06256613.1| dipeptidyl-peptidase IV [Prevotella oris F0302]
 gi|281400165|gb|EFB30996.1| dipeptidyl-peptidase IV [Prevotella oris F0302]
          Length = 734

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 66/189 (34%), Gaps = 21/189 (11%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++ ++ S VS   K +L  +       +Y+T              S + +++    +   
Sbjct: 10  MMLLATSNVSADNKITLKDVTGKTFTPKYITGVDPIKGTDRYASISNDGRQIIEYAFKTG 69

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------SVQKDEAMDIYSVD 288
           +  RV            +  +          S +GKR LI        ++    D Y   
Sbjct: 70  NQTRVLFDIANTHGESIKQLDGY------TLSPDGKRMLIQTNTHKIYRRSFTADYYIYT 123

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +QS   E+L+         ++SPD +QI F  D        V     + + +I++D + +
Sbjct: 124 IQSRKLEKLSTG-GPQQIPTWSPDGNQIAFVRD---NNIFLVKLLYDNAESQITKDGKFN 179

Query: 349 ---YFDPVW 354
                 P W
Sbjct: 180 EIINGVPDW 188



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 60/193 (31%), Gaps = 32/193 (16%)

Query: 271 RALISVQKDEAMDIYSVDLQSNA--TERLTNT---LFINISASYSPDSSQI---VFESDR 322
             L +        I   D+       + +T        +  AS S D  QI    F++  
Sbjct: 11  MLLATSNVSADNKITLKDVTGKTFTPKYITGVDPIKGTDRYASISNDGRQIIEYAFKTGN 70

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVM 376
           + +    +  ++G   K++             SP G  +     + + +         + 
Sbjct: 71  QTRVLFDIANTHGESIKQLD--------GYTLSPDGKRMLIQTNTHKIYRRSFTADYYIY 122

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS-----IDLNGRNETLI 431
                +   L      Q PTWSP G  + F R  +      LY      I  +G+   +I
Sbjct: 123 TIQSRKLEKLSTGGPQQIPTWSPDGNQIAFVRDNNIFLVKLLYDNAESQITKDGKFNEII 182

Query: 432 NTPAYASDPQWVG 444
           N       P WV 
Sbjct: 183 NGV-----PDWVY 190



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 17/115 (14%)

Query: 220 SPNQQKVAYATYDDEDILRV----YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ +++   T   +   R     Y + T   R  +++       + P +S +G +    
Sbjct: 95  SPDGKRMLIQTNTHKIYRRSFTADYYIYTIQSRKLEKLSTGGPQQI-PTWSPDGNQIAFV 153

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLF----INISASY-----SPDSSQIVFESD 321
             +D  + +  + L  NA  ++T        IN    +        +  + F +D
Sbjct: 154 --RDNNIFLVKL-LYDNAESQITKDGKFNEIINGVPDWVYEEEFSTNRSLCFTAD 205


>gi|331694803|ref|YP_004331042.1| WD40 repeat-containing protein [Pseudonocardia dioxanivorans CB1190]
 gi|326949492|gb|AEA23189.1| WD40 repeat-containing protein [Pseudonocardia dioxanivorans CB1190]
          Length = 1307

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 78/235 (33%), Gaps = 24/235 (10%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS---MILAPRFSSNGKRALISV 276
            SP+ + VA    D      V L D   D A  R         ++    +S +G+   ++ 
Sbjct: 1025 SPDGRVVASGATDGG----VVLWDVGPDGAVPRPQPLPGDGALVEQLEWSPDGRTLAVAG 1080

Query: 277  QKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D+A+ ++ +   ++     LT        A++SPDS  +   S       + +     
Sbjct: 1081 D-DDAVRLFDMTRPTSPLAATLTGPHSYVFGAAWSPDSHLLAAVS---ADTTVRIWDVAD 1136

Query: 336  SDQKRISQD----KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM----KKDGSQERLLV 387
              + R   D         +   +SP G  +A T  + +   +  +          E L  
Sbjct: 1137 PARPRQLGDAVAAGSGYAYSVAFSPDGRTLA-TGTADKTVRLWDVADPADPTPVGEPLTG 1195

Query: 388  EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
              + +    +SP GR +       GD   +++ +       T        +   W
Sbjct: 1196 PGNTVFGLAYSPDGRLVAAGS---GDGTVRIWDVTDPASPTTWATLHGGFTAAVW 1247



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 68/197 (34%), Gaps = 15/197 (7%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            + +V        L  M R  + +          +F   +SP+   +A  + D      V 
Sbjct: 1075 TLAVAGDDDAVRLFDMTRPTSPLAATLTGPHSYVFGAAWSPDSHLLAAVSADT----TVR 1130

Query: 241  LMDTRIDRAPKRIGN----FRSMILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNAT- 294
            + D      P+++G+          +  FS +G+    +   D+ + ++   D       
Sbjct: 1131 IWDVADPARPRQLGDAVAAGSGYAYSVAFSPDGRTLA-TGTADKTVRLWDVADPADPTPV 1189

Query: 295  -ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--ASYFD 351
             E LT         +YSPD   +   S  +G  +++ +    S     +      A+ + 
Sbjct: 1190 GEPLTGPGNTVFGLAYSPDGRLVAAGSG-DGTVRIWDVTDPASPTTWATLHGGFTAAVWA 1248

Query: 352  PVWSPQGDLIAFTKFSG 368
              +SP G  +A     G
Sbjct: 1249 VGFSPDGSRLAAAGADG 1265



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 78/229 (34%), Gaps = 22/229 (9%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           VA       D  R  ++++       R+ +         ++++G+  L     + + D  
Sbjct: 622 VAAYATSPTDAARSSVLESSTTSTATRLLSPAGTARQAAWTADGRTMLTVDAAEGSADAA 681

Query: 286 SVDLQ-SNATERL-------TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 +     +       T     + + + SPD  ++   +   G  +L+ + ++G+ 
Sbjct: 682 LQRWDVTGTGTPVAAGGPVGTGQPGADYALAVSPDG-RLAATAGTAGTVRLWDVAADGAP 740

Query: 338 QK--RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNL 392
           +     +     + +   +SP G ++A     G      +        +   L      +
Sbjct: 741 RPLGPAAAAPGGTVYGLAFSPDGAVLAAATADGSVLLWSLADPARPVAAGPSLATGGGPV 800

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +A  ++P+GR L        D G +L+ +      +    TP  A  P 
Sbjct: 801 RAIAFAPTGRLLA---TGQTDGGVRLWDV-----ADPAAPTPVGAPLPA 841



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 59/227 (25%), Gaps = 63/227 (27%)

Query: 252  RIGNFRSMILAPRFSSNGKRALI------------------------------------- 274
            R+ +    + A  +S++G+   +                                     
Sbjct: 960  RLTDPHDTVFALDWSADGRSVALGVGGTAKNVRIWDVTDPRAPAALTPALTAAAGAPGLS 1019

Query: 275  -------------SVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFE 319
                         S   D  + ++ V           L     +     +SPD   +   
Sbjct: 1020 GSVARSPDGRVVASGATDGGVVLWDVGPDGAVPRPQPLPGDGALVEQLEWSPDGRTLAVA 1079

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             D +   +L+ M    S          +  F   WSP   L+A            V    
Sbjct: 1080 GD-DDAVRLFDMTRPTSPLAATLTGPHSYVFGAAWSPDSHLLAAVSADTTVRIWDVADP- 1137

Query: 380  GSQERLLVE-----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             ++ R L +          +  +SP GR+L        D   +L+ +
Sbjct: 1138 -ARPRQLGDAVAAGSGYAYSVAFSPDGRTLA---TGTADKTVRLWDV 1180



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 54/366 (14%), Positives = 107/366 (29%), Gaps = 50/366 (13%)

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV-KDRKQIIG 141
           S  S   ++ +P    R   W + G  +L     +   +       + WDV      +  
Sbjct: 641 STTSTATRLLSPAGTARQAAWTADGRTML----TVDAAEGSADAALQRWDVTGTGTPVAA 696

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
                +       A  +S D              R+   + +  +      L  +  DGA
Sbjct: 697 GGPVGTGQPGADYALAVSPD-------------GRLAATAGTAGT----VRLWDVAADGA 739

Query: 202 NIRYLTPS---RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
             R L P+       ++   FSP+   +A AT D   +L       R   A   +     
Sbjct: 740 -PRPLGPAAAAPGGTVYGLAFSPDGAVLAAATADGSVLLWSLADPARPVAAGPSLATGGG 798

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATERLTNTLFINISA-SYSPDSSQI 316
            + A  F+  G+    + Q D  + ++   D  +             + A +++ D +++
Sbjct: 799 PVRAIAFAPTGRLLA-TGQTDGGVRLWDVADPAAPTPVGAPLPAGRTVFALAFTRDGTRL 857

Query: 317 VFESDREGKEQLYVM--QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              +       L+ +   ++ +          A       SP G  IA          + 
Sbjct: 858 A-AAGLSRTVSLWDVADPADPTPVGSPLAGPTAQVNSLAVSPDGSTIAAASSDD---RVW 913

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                               P+          +  + G  G +L ++  +G         
Sbjct: 914 TWDLRTGAP-----AGTRPHPS----------TVTQVGYDGGRLVTVGGDGTIRFWDAGD 958

Query: 435 AYASDP 440
           A  +DP
Sbjct: 959 ARLTDP 964


>gi|302038575|ref|YP_003798897.1| hypothetical protein NIDE3282 [Candidatus Nitrospira defluvii]
 gi|300606639|emb|CBK42972.1| exported protein of unknown function, contains WD40 repeats
           [Candidatus Nitrospira defluvii]
          Length = 369

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 67/201 (33%), Gaps = 20/201 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G             ++   ++P+ Q +     D      V + D    R  + +    + 
Sbjct: 39  GFRELKTFRGHSHGVWSVAYAPDGQTIVSGGVDR----YVRIWDIETGRLLRSLRGHTAD 94

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIV 317
           I A  F+ +G+    S  +D  + ++  + ++    +L  T       S S SPD   + 
Sbjct: 95  IRALVFTPDGRTLA-SGSEDRTIRLW--NPKTGEPTKLLFTRYDHNVCSLSLSPDGLMLA 151

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-----VWSPQGDLIAFTKFSGEKFA 372
               R    +   +    +    ++   +  Y         +SP G  +A     G K  
Sbjct: 152 ----RGSHNKDIKIWEVTTGTDLMTLLGKDQYDHHWSVCVAFSPDGVHLASGSDIG-KIR 206

Query: 373 IGVMKKDGSQERLLVEDSNLQ 393
           I  +   G +E++L      +
Sbjct: 207 IWEVLPSG-EEKILHNGHWEE 226



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 98/299 (32%), Gaps = 40/299 (13%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G ++       +++VSG +   + + D +   +          +    F+P+ + +A
Sbjct: 49  HSHGVWSVAYAPDGQTIVSGGVDRYVRIWDIETGRLLRSLRGHTADIRALVFTPDGRTLA 108

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYS 286
             + D      + L + +     K +       +     S +G         ++ + I+ 
Sbjct: 109 SGSEDR----TIRLWNPKTGEPTKLLFTRYDHNVCSLSLSPDGLMLA-RGSHNKDIKIWE 163

Query: 287 VDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGKEQLYVMQSNG-------- 335
           V   ++    L    +    ++  ++SPD   +   SD  GK +++ +  +G        
Sbjct: 164 VTTGTDLMTLLGKDQYDHHWSVCVAFSPDGVHLASGSD-IGKIRIWEVLPSGEEKILHNG 222

Query: 336 ---------SDQKRISQDKEASYFDP--------VWSPQGDLIAFTKFSGEKFAIGVMKK 378
                    ++ +    + +  +  P        V++P   ++              M  
Sbjct: 223 HWEETAEDSTETRGFFIEDDGGFQKPMEFWIGAMVFTPDAKMLITGSRDNT-IRFFEMPT 281

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                 +   +  +++   SP G+ LI       D   + + I   GRN     T + A
Sbjct: 282 MNELRVVRGHNGWVRSLVVSPDGKVLI---SAGDDNTIRFWDI-ATGRNFRTDKTHSGA 336



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 29/100 (29%), Gaps = 5/100 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G   N++   +    N   +    +  +     SP+ +          D   +   D  
Sbjct: 267 TGSRDNTIRFFEMPTMNELRVVRGHNGWVRSLVVSPDGK----VLISAGDDNTIRFWDIA 322

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             R  +        +     S +G R   S   D  + ++
Sbjct: 323 TGRNFRTDKTHSGAVRGIALSPDGLRLA-SASWDRTVKLW 361


>gi|253748664|gb|EET02684.1| WD-40 repeat protein [Giardia intestinalis ATCC 50581]
          Length = 301

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 73/202 (36%), Gaps = 20/202 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + + +   + D      + L DT   +    +    + +   R S +G+    SV 
Sbjct: 107 SFSIDGRTIVTCSDDK----SIKLFDTTNVQFRVCLSGHTNWVYNARLSPDGRLIA-SVS 161

Query: 278 KDEAMDIYSVDLQS-NATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQS 333
            D ++ I+  D ++ +  + +TN   ++++     +SPD + +         + + +   
Sbjct: 162 DDLSLRIW--DTRTLSCVQAITNDSGLSLNPRVVRWSPDGTTVA----TGCTQDVQLWDV 215

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             S   +             + P G  +  T   G    + +++   S   +   +  + 
Sbjct: 216 RSSTLLQHYSCHTNQVTCLDFHPNGKYMVSTGSDGTARILDLVQ-GRSLYTVRGHEGGVN 274

Query: 394 APTWSPSGRSLIFSRKKDGDTG 415
              + P G   +F+    GD G
Sbjct: 275 YVCFCPDGS--VFAT--GGDDG 292



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 66/186 (35%), Gaps = 19/186 (10%)

Query: 198 RDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D  N+++          ++  R SP+ + +A  + D    L + + DTR     + I N
Sbjct: 127 FDTTNVQFRVCLSGHTNWVYNARLSPDGRLIASVSDD----LSLRIWDTRTLSCVQAITN 182

Query: 256 FRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSP 311
              + L P   R+S +G        +D  +     D++S+   +  +          + P
Sbjct: 183 DSGLSLNPRVVRWSPDGTTVATGCTQDVQLW----DVRSSTLLQHYSCHTNQVTCLDFHP 238

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           +   +V  +  +G  ++  +           +  E       + P G + A     G   
Sbjct: 239 NGKYMV-STGSDGTARI--LDLVQGRSLYTVRGHEGGVNYVCFCPDGSVFATGGDDGRVM 295

Query: 371 -FAIGV 375
            F +GV
Sbjct: 296 LFELGV 301


>gi|146299179|ref|YP_001193770.1| peptidase S9B dipeptidylpeptidase IV subunit [Flavobacterium
           johnsoniae UW101]
 gi|146153597|gb|ABQ04451.1| peptidase family S9B, dipeptidylpeptidase IV domain protein
           [Flavobacterium johnsoniae UW101]
          Length = 723

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 53/380 (13%), Positives = 131/380 (34%), Gaps = 80/380 (21%)

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           ++  L+D    K++          + +++A  I    + +   +     +       S  
Sbjct: 62  MQIDLYDFATLKKVSNL---VDTKNHKELADGIDSYTFDASEKKILIACNSTKIFRHSFT 118

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM--- 242
           +      +          + L    D  + EP FSP+  K+AYA    ++ L VY +   
Sbjct: 119 ADYYLYDIA--------AKSLVKLVDFQIQEPTFSPDGTKIAYA---KKNNLYVYDVASK 167

Query: 243 -DTRIDRAPKRIGNFRSM-----------ILAPRFSSNGKRALI---------------- 274
             T I    K+      +           + A  +S + K+                   
Sbjct: 168 KSTPITTDGKKNAVINGITDWVYEEEFAFVRAFDWSKDSKKVAYIRFDESQVPEFSMSIF 227

Query: 275 ---------------SVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQI 316
                          + +K+  + ++  D+ +   +++    + +       ++ D++ +
Sbjct: 228 HKDLYPKIETFKYPKAGEKNSEVSLHIYDVAAGTAKKVNLGNYNDFYIARMQWTNDANVL 287

Query: 317 ---VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGE 369
              V    ++  + L+V   N +  K +  +K+ +Y D      +      I +T     
Sbjct: 288 CVQVLNRHQDNLDLLFV-DGNTATAKVVLNEKDKAYVDVTDNLTFLKDNSFI-WTSEKDG 345

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG-----RSLIFSRKKDGDTGSKLYSIDLN 424
              I V  K+G  +  + +  N +  ++   G     +++ +   ++G     LY I L+
Sbjct: 346 FNHIYVYDKNGKLKNQVTK-GNWEVVSY--YGFDEKTKTIFYQSTENGSINRDLYRIGLD 402

Query: 425 GRNETLINTPAYASDPQWVG 444
           G+N+  +++    S+  +  
Sbjct: 403 GKNKVRLSSKTGTSEATFSP 422



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/361 (13%), Positives = 123/361 (34%), Gaps = 74/361 (20%)

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
               ++ L+D+  +  +                  +   I +      G   ++I +  +
Sbjct: 116 SFTADYYLYDIAAKSLVK----------------LVDFQIQEPTFSPDG---TKIAYAKK 156

Query: 183 SV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-------RFSPNQQKVAYATYDD 233
           +   V  +       +  DG     +    D +  E         +S + +KVAY  +D+
Sbjct: 157 NNLYVYDVASKKSTPITTDGKKNAVINGITDWVYEEEFAFVRAFDWSKDSKKVAYIRFDE 216

Query: 234 EDIL------------------------------RVYLMDTRIDRAPKR-IGNFRSMILA 262
             +                                +++ D     A K  +GN+    +A
Sbjct: 217 SQVPEFSMSIFHKDLYPKIETFKYPKAGEKNSEVSLHIYDVAAGTAKKVNLGNYNDFYIA 276

Query: 263 -PRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTL---FINI--SASYSPDSS 314
             +++++     + V  +  + +D+  VD  +   + + N     ++++  + ++  D+S
Sbjct: 277 RMQWTNDANVLCVQVLNRHQDNLDLLFVDGNTATAKVVLNEKDKAYVDVTDNLTFLKDNS 336

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-- 372
             ++ S+++G   +YV   NG  + ++++          +  +   I +           
Sbjct: 337 -FIWTSEKDGFNHIYVYDKNGKLKNQVTKGNWEVVSYYGFDEKTKTIFYQSTENGSINRD 395

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRNETL 430
           +  +  DG  +  L   +     T+SP+     F      +T    Y+++    G+   +
Sbjct: 396 LYRIGLDGKNKVRLSSKTGTSEATFSPN--FQYFITTFSSNTQPTTYTLNEAKTGKEIQV 453

Query: 431 I 431
           I
Sbjct: 454 I 454


>gi|58428260|gb|AAW77297.1| dipeptidyl peptidase IV [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 817

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 54/354 (15%), Positives = 102/354 (28%), Gaps = 80/354 (22%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD----------RDG-ANI 203
           A      +Y     E G     +L   +   + I   +L V D          RDG  N 
Sbjct: 184 ARARCSKLYAKDKPEPG-----VLSPDKRSEAFIRDWNLWVRDLASGQETQLTRDGVENF 238

Query: 204 RYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-------- 252
            Y T +      +     +SP+  K+A    D      +YL+ T++     +        
Sbjct: 239 GYATDNAGWQHTDNAIVAWSPDSSKIATFQQDQRKTGDMYLVSTKLGHPELQSWKYPLAG 298

Query: 253 ------------------------------------IGNFRSMILAPRFSSNGKRALI-- 274
                                               +     +    +++ + K      
Sbjct: 299 DKDVTMIERVIIDVPTRSVLRLKTAPDQHRSTLCDDVSCSPGLWDDVKWAPDSKTLAFAS 358

Query: 275 SVQKDEAMDIYSVDLQSNATE------RLTNTLFINISASYS--PDSSQIVFESDREGKE 326
           + +  +   +   D  + A          T      ++A+++  P S++ V+ S+R    
Sbjct: 359 TSRFHKQTWLRIADASTGAVRTAFDETVKTYYESGQVAANWAYLPASNEAVWFSERSDWG 418

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKD 379
           QLY+        KR     E +  + +        A+    G           +  +  D
Sbjct: 419 QLYLYDLATGKPKRAITTGEGNVTELLRVDPVTRTAWFVGVGRSAGVDPYYQQLWKVSLD 478

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G +  LL  +    +   SP G   + S          L     +GR  + I T
Sbjct: 479 GGEPVLLTPEPANHSIALSPDGARFVDSYSTSVTPPVTLLRDAGDGRTVSTIAT 532


>gi|332529765|ref|ZP_08405719.1| hypothetical protein HGR_07591 [Hylemonella gracilis ATCC 19624]
 gi|332040786|gb|EGI77158.1| hypothetical protein HGR_07591 [Hylemonella gracilis ATCC 19624]
          Length = 1265

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 75/238 (31%), Gaps = 42/238 (17%)

Query: 248 RAPKRIGNFRSMIL----APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           R P R+            AP  S      L    +    ++Y+ DL+     RL +    
Sbjct: 54  RVPARLTVGLGDQFLGQLAPPDSPLSSTLLFVSNRSVVTELYAQDLEQGRERRLFDEGAD 113

Query: 304 NISASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ----DKEASYFDPVWSP 356
                 SPD   +++ S R    G+  +  M         +        E       W  
Sbjct: 114 VTWPRLSPDGRWLLYISFRREAGGQLCVREMPRENGQDDEVGNRRCLGAEVLALQAEW-K 172

Query: 357 QGDLIAFTKFSGEKFAIGVMKKD---------GSQERL-LVEDSNLQAPTWSPSGRSLIF 406
               I     +  +  + +             G+  +L  +   NL +P  SP GR L++
Sbjct: 173 DNTQIVLLHRTTIQDDLQLSLVTVVPPKEGGEGAAFQLHPLPSRNLSSPAVSPDGRWLVY 232

Query: 407 -----SRKKDG-----DTGSKLYSIDLNGRNETLIN----------TPAYASDPQWVG 444
                S K  G        ++L ++ L+    T +            PA++ D +W+ 
Sbjct: 233 VPVQRSAKPVGPGFAARASARLEALRLDQPGATPVPLPLDLPGQSGQPAFSRDGRWLY 290



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 55/327 (16%), Positives = 107/327 (32%), Gaps = 62/327 (18%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D     +       +S +LFVS   V       L   D +    R L      +   PR 
Sbjct: 65  DQFLGQLAPPDSPLSSTLLFVSNRSV----VTELYAQDLEQGRERRLFDEGADVT-WPRL 119

Query: 220 SPNQQKVAYATYDD--------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           SP+ + + Y ++           ++ R    D  +    +R      + L   +  +  +
Sbjct: 120 SPDGRWLLYISFRREAGGQLCVREMPRENGQDDEVGN--RRCLGAEVLALQAEW-KDNTQ 176

Query: 272 ALI----SVQKDEAMDIYSV--DLQSNA--TERLTNTLFIN-ISASYSPDSSQIV----- 317
            ++    ++Q D  + + +V    +       +L      N  S + SPD   +V     
Sbjct: 177 IVLLHRTTIQDDLQLSLVTVVPPKEGGEGAAFQLHPLPSRNLSSPAVSPDGRWLVYVPVQ 236

Query: 318 ---------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                    F +    + +   +   G+    +  D       P +S  G  +  T+F  
Sbjct: 237 RSAKPVGPGFAARASARLEALRLDQPGATPVPLPLDLPGQSGQPAFSRDGRWLYVTQFFT 296

Query: 369 EKFAIGVMKKD--GSQERLLVEDSNLQAP--------------TW-----SPSGRSLIFS 407
           +  A GV+  D  G   RL  +     A                W     +P+   L+ +
Sbjct: 297 DSNADGVIDADDRGVLFRLPFDSGRDDAVERAVAASPDQLSSQAWNCQYPAPAATVLVAT 356

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTP 434
            ++ G     +Y + L+G+  T  + P
Sbjct: 357 CERHG--ALDVYQLPLDGQVPTAWDLP 381


>gi|168699382|ref|ZP_02731659.1| WD-40 repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 1112

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 53/332 (15%), Positives = 97/332 (29%), Gaps = 67/332 (20%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQI--------IGKKFFSSPASWRKIAHTISDDI 162
           LV G         L    R+W+V   K++               +P   R +   + D  
Sbjct: 567 LVLGS---NPDGAL----RMWEVATGKKVRDYGGLAHGAWAAAFAPDGKRIVTARLDDVN 619

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF--- 219
              +   K   +           +  +   L +   DG   R LT +   +L++PR    
Sbjct: 620 VIDVATGKPVHD-------FGGHTSSLHEVLFI--ADG---RLLTSAGSALLWDPRIGRK 667

Query: 220 ---------------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                          S     +A    D +   R++   T  +     +           
Sbjct: 668 LGVFREHGGLGGLSVSRAGALIATTGGDQK--ARLWSATTLTELRAIDLKGLTGHST--D 723

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK  ++   +     I   D  +    R+     +     ++PD   +VF      
Sbjct: 724 FSPDGKELIVGGNEPG---IRVFDTATGQPVRVVAAGEVANWVRFTPDGQWVVFR-QWSD 779

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           K ++ V       +           +    SP G L+A     G+     V      ++ 
Sbjct: 780 KTKVRVWDRAADKEVLTFDAGGGFIYTLDLSPDGRLLA---AGGKDGHARVFDLRNGKQV 836

Query: 385 LLVEDSNLQAPT-----------WSPSGRSLI 405
              + +   AP+           +SP GR L 
Sbjct: 837 GEFDTNLRPAPSEHNANSVYAVAFSPDGRLLA 868



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 83/259 (32%), Gaps = 52/259 (20%)

Query: 187 GIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           G  +  + V D   G  +R +     ++    RF+P+ Q V +  + D+  +RV+  D  
Sbjct: 734 GGNEPGIRVFDTATGQPVRVVAAG--EVANWVRFTPDGQWVVFRQWSDKTKVRVW--DRA 789

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            D+           I     S +G+                                   
Sbjct: 790 ADKEVLTFDAGGGFIYTLDLSPDGRLLA----------------AGGK------------ 821

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
                 D    VF+  R GK+   V + + + +   S+    S +   +SP G L+A   
Sbjct: 822 ------DGHARVFD-LRNGKQ---VGEFDTNLRPAPSEHNANSVYAVAFSPDGRLLAVGG 871

Query: 366 FSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             G    + + +     ERL        +    +SP G  L+      GD  +  +    
Sbjct: 872 ADG---VVRMQELATGGERLRFSGHRGAVLELAFSPDGALLV---SGSGDRSAVTWDATG 925

Query: 424 NGRNETLINTPAYASDPQW 442
            G      + P  A+D  W
Sbjct: 926 AGLPIDPKHQPKDAAD-AW 943



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 47/312 (15%), Positives = 99/312 (31%), Gaps = 41/312 (13%)

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
             F+LWDV  +KQ+           +R                +  DF+     V  S  
Sbjct: 532 ATFQLWDVATKKQLPA-----PAEPFRD-------------RVDVRDFSPDGKLVLGSNP 573

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G ++  +  +   G  +R          +   F+P+ +++  A  DD     V ++D  
Sbjct: 574 DGALR--MWEV-ATGKKVRD-YGGLAHGAWAAAFAPDGKRIVTARLDD-----VNVIDVA 624

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +     G   S +    F ++G+  L++      +    +               +  
Sbjct: 625 TGKPVHDFGGHTSSLHEVLFIADGR--LLTSAGSALLWDPRI---GRKLGVFREHGGL-G 678

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             S S   + I       G ++  +  +    + R    K  +     +SP G  +    
Sbjct: 679 GLSVSRAGALIATT---GGDQKARLWSATTLTELRAIDLKGLTGHSTDFSPDGKELIV-- 733

Query: 366 FSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             G +  I V      Q  R++          ++P G+ ++F +  D  T  +++    +
Sbjct: 734 -GGNEPGIRVFDTATGQPVRVVAAGEVANWVRFTPDGQWVVFRQWSD-KTKVRVWDRAAD 791

Query: 425 GRNETLINTPAY 436
               T      +
Sbjct: 792 KEVLTFDAGGGF 803



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 45/302 (14%), Positives = 89/302 (29%), Gaps = 63/302 (20%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA- 249
             +  M++  A ++        +L     SP+ Q +A             L D    +  
Sbjct: 489 YEVWDMEKRAATLKVPVEGGGNLLGHALLSPDGQTLAVV---QPGAATFQLWDVATKKQL 545

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           P     FR  +    FS +GK  ++    D A+ ++ V                  +A++
Sbjct: 546 PAPAEPFRDRVDVRDFSPDGK-LVLGSNPDGALRMWEV-ATGKKVRDYGGLAHGAWAAAF 603

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQ--------------------KRISQDKEASY 349
           +PD  +IV        + + V+                           + ++    A  
Sbjct: 604 APDGKRIV----TARLDDVNVIDVATGKPVHDFGGHTSSLHEVLFIADGRLLTSAGSALL 659

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAI------GVMKKDGSQE--RLLVEDSNLQ-------- 393
           +DP     G  +   +  G    +       ++   G  +  RL    +  +        
Sbjct: 660 WDPRI---GRKLGVFREHGGLGGLSVSRAGALIATTGGDQKARLWSATTLTELRAIDLKG 716

Query: 394 ----APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP------AYASDPQWV 443
               +  +SP G+ LI    + G            G+   ++          +  D QWV
Sbjct: 717 LTGHSTDFSPDGKELIVGGNEPGIRVFD----TATGQPVRVVAAGEVANWVRFTPDGQWV 772

Query: 444 GF 445
            F
Sbjct: 773 VF 774



 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 95/283 (33%), Gaps = 27/283 (9%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR-ILFVSESVVSG 187
           R+ DV   +++        PAS    AH ++  +  S    +   N + +L+   +  + 
Sbjct: 389 RVLDVVTGEEVAR-----VPASL---AHVLTRPLVTSDREPELSVNGKWMLWTHTTSDNN 440

Query: 188 IIKNSLCVMDRDGANIRYLTPS--RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             K ++   D      R +  +   D  LF    + N + V       +    V+ M+ R
Sbjct: 441 AAKKTVYAADLTAKEPRPVVFAEVGDGPLFGLTPAANGRAVL---MHFQSTYEVWDMEKR 497

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +    +++     S +G+   +   +  A      D+ +          F + 
Sbjct: 498 AATLKVPVEGGGNLLGHALLSPDGQTLAVV--QPGAATFQLWDVATKKQLPAPAEPFRDR 555

Query: 306 SAS--YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                +SPD  ++V  S+ +G  +++  +     + R         +   ++P G  I  
Sbjct: 556 VDVRDFSPDG-KLVLGSNPDGALRMW--EVATGKKVRDYGGLAHGAWAAAFAPDGKRIVT 612

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
            +       + V+     +         S+L    +   GR L
Sbjct: 613 ARLDD----VNVIDVATGKPVHDFGGHTSSLHEVLFIADGRLL 651


>gi|163938166|ref|YP_001643050.1| peptidase S9 prolyl oligopeptidase [Bacillus weihenstephanensis
           KBAB4]
 gi|163860363|gb|ABY41422.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Bacillus weihenstephanensis KBAB4]
          Length = 654

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 108/303 (35%), Gaps = 52/303 (17%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T      +S+ +        G   N + V   DG +   +T  ++ +    R  P  +  
Sbjct: 71  THPLWSPDSKTIAYLSPGGDGANTNQIFVKSIDGGSKVQITDEKEGVNTFKR-EPTGKGF 129

Query: 227 AYATY------------DDEDILRV-------------YLMDTRIDRAPKRIGNFRSMIL 261
            Y                  D   V                  + D+  +++ +   +  
Sbjct: 130 YYVAQSKECEEIKKRKERYGDFHHVGKEHRNNCLYYVEIEKGIQNDKGERKVSSVYQLTN 189

Query: 262 APRF-------SSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              F       S++G + +     S+      D+Y +D+++   +++     +  S  +S
Sbjct: 190 GKDFYIHNFDISNDGTKVVFMATPSLNDHMNGDLYILDVEAEELQKMNVDKLLGGSVCFS 249

Query: 311 PDSSQIVFE-SDREGKE--------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           P+ S+I +  S RE +          L +   N  +  +   + +++     W+ +G  I
Sbjct: 250 PEGSKICYSASIREKEYYRNHIQESTLEIYDMNTGEVIQPLTNFDSTVMPLQWTDKG--I 307

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                    + IG++ +DG+ E +L +  D  +   + +  GR + +S+    +T  ++Y
Sbjct: 308 LIRWQDKTNYLIGLLCEDGTVE-MLSDKVDGFIMDASITRDGRHISYSKAITNET-FEIY 365

Query: 420 SID 422
             D
Sbjct: 366 LDD 368



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 89/280 (31%), Gaps = 56/280 (20%)

Query: 218 RFSPNQQKVAYA---TYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+       +++  R Y+     D+     + +       P +S + K   
Sbjct: 24  NISDDGKNVAFVKKTANWEDNTYRNYVWIYEKDKEQSYPLTDGDIDSTHPLWSPDSKTIA 83

Query: 274 ISVQKDEAM---DIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFES--------- 320
                 +      I+   +   +  ++T+    +N      P      + +         
Sbjct: 84  YLSPGGDGANTNQIFVKSIDGGSKVQITDEKEGVNTFKR-EPTGKGFYYVAQSKECEEIK 142

Query: 321 ---DREGKEQ-----------LYV-----MQSNGSDQK-----RISQDKEASYFDPVWSP 356
              +R G               YV     +Q++  ++K     +++  K+    +   S 
Sbjct: 143 KRKERYGDFHHVGKEHRNNCLYYVEIEKGIQNDKGERKVSSVYQLTNGKDFYIHNFDISN 202

Query: 357 QGDLIAF----TKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS---- 407
            G  + F    +        + ++  +  + + + V+     +  +SP G  + +S    
Sbjct: 203 DGTKVVFMATPSLNDHMNGDLYILDVEAEELQKMNVDKLLGGSVCFSPEGSKICYSASIR 262

Query: 408 -----RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                R    ++  ++Y ++     + L N  +     QW
Sbjct: 263 EKEYYRNHIQESTLEIYDMNTGEVIQPLTNFDSTVMPLQW 302



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 13/111 (11%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPS 400
           +      S  G  +AF K +        +  + + +KD  Q   L + D +   P WSP 
Sbjct: 19  TLSGTNISDDGKNVAFVKKTANWEDNTYRNYVWIYEKDKEQSYPLTDGDIDSTHPLWSPD 78

Query: 401 GRSLIFSR-KKDGDTGSKLYSIDLNGRNETLINT-----PAYASDPQWVGF 445
            +++ +     DG   ++++   ++G ++  I         +  +P   GF
Sbjct: 79  SKTIAYLSPGGDGANTNQIFVKSIDGGSKVQITDEKEGVNTFKREPTGKGF 129



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 84/272 (30%), Gaps = 57/272 (20%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--YD 232
           + FV ++        +N + + ++D     Y     D     P +SP+ + +AY +   D
Sbjct: 32  VAFVKKTANWEDNTYRNYVWIYEKD-KEQSYPLTDGDIDSTHPLWSPDSKTIAYLSPGGD 90

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------------KDE 280
             +  ++++         +       +    R    GK      Q            +  
Sbjct: 91  GANTNQIFVKSIDGGSKVQITDEKEGVNTFKR-EPTGKGFYYVAQSKECEEIKKRKERYG 149

Query: 281 AMD----------IYSVDLQSN-----------ATERLTNTLFINISAS-YSPDSSQIVF 318
                        +Y V+++             +  +LTN     I     S D +++VF
Sbjct: 150 DFHHVGKEHRNNCLYYVEIEKGIQNDKGERKVSSVYQLTNGKDFYIHNFDISNDGTKVVF 209

Query: 319 ESDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---------- 364
            +     +     LY++     + ++++ DK        +SP+G  I ++          
Sbjct: 210 MATPSLNDHMNGDLYILDVEAEELQKMNVDKLLG-GSVCFSPEGSKICYSASIREKEYYR 268

Query: 365 -KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                    I  M   G   + L    +   P
Sbjct: 269 NHIQESTLEIYDMNT-GEVIQPLTNFDSTVMP 299


>gi|145638709|ref|ZP_01794318.1| translocation protein TolB precursor [Haemophilus influenzae
           PittII]
 gi|145272304|gb|EDK12212.1| translocation protein TolB precursor [Haemophilus influenzae
           PittII]
          Length = 82

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +           +L      ++P+ SP+G  +I+S  +    G  L  +  +GR 
Sbjct: 3   NGNNNVVKQDLTTGVSEVLSTSFLGESPSLSPNGIMIIYSSTQG--LGKVLQLVSADGRF 60

Query: 428 E-TLINTPAYASDPQWVGFM 446
           + +L  +      P W  ++
Sbjct: 61  KASLPGSDGQVKFPAWSPYL 80



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 3/78 (3%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS- 381
            G   +          + +S         P  SP G +I ++   G    + ++  DG  
Sbjct: 3   NGNNNVVKQDLTTGVSEVLSTSFLGE--SPSLSPNGIMIIYSSTQGLGKVLQLVSADGRF 60

Query: 382 QERLLVEDSNLQAPTWSP 399
           +  L   D  ++ P WSP
Sbjct: 61  KASLPGSDGQVKFPAWSP 78


>gi|229131167|ref|ZP_04260077.1| Acylamino-acid-releasing enzyme [Bacillus cereus BDRD-ST196]
 gi|228652277|gb|EEL08204.1| Acylamino-acid-releasing enzyme [Bacillus cereus BDRD-ST196]
          Length = 654

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 108/303 (35%), Gaps = 52/303 (17%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T      +S+ +        G   N + V   DG +   +T  ++ +    R  P  +  
Sbjct: 71  THPLWSPDSKTIAYLSPGGDGANTNQIFVKSIDGGSKVQITDEKEGVNTFKR-EPTGKGF 129

Query: 227 AYATY------------DDEDILRV-------------YLMDTRIDRAPKRIGNFRSMIL 261
            Y                  D   V                  + D+  +++ +   +  
Sbjct: 130 YYVAQSKECEEIKKRKERYGDFHHVGKEHRNNCLYYVEIEKGIQNDKGERKVSSVYQLTN 189

Query: 262 APRF-------SSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              F       S++G + +     S+      D+Y +D+++   +++     +  S  +S
Sbjct: 190 GKDFYIHNFDISNDGTKVVFMATPSLNDHMNGDLYILDVEAEELQKMNVDKLLGGSVCFS 249

Query: 311 PDSSQIVFE-SDREGKE--------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           P+ S+I +  S RE +          L +   N  +  +   + +++     W+ +G  I
Sbjct: 250 PEGSKICYSASIREKEYYRNHIQESTLEIYDMNTGEVIQPLTNFDSTVMPLQWTDKG--I 307

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                    + IG++ +DG+ E +L E  D  +   + +  GR + +S+    +T  ++Y
Sbjct: 308 LIRWQDKTNYLIGLLCEDGTVE-MLSEKVDGFIMDASITRDGRHISYSKAITNET-FEIY 365

Query: 420 SID 422
             D
Sbjct: 366 LDD 368



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 89/280 (31%), Gaps = 56/280 (20%)

Query: 218 RFSPNQQKVAYA---TYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+       +++  R Y+     D+     + +       P +S + K   
Sbjct: 24  NISDDGKNVAFVKKTANWEDNTYRNYVWIYEKDKEQSYPLTDGDIDSTHPLWSPDSKTIA 83

Query: 274 ISVQKDEAM---DIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFES--------- 320
                 +      I+   +   +  ++T+    +N      P      + +         
Sbjct: 84  YLSPGGDGANTNQIFVKSIDGGSKVQITDEKEGVNTFKR-EPTGKGFYYVAQSKECEEIK 142

Query: 321 ---DREGKEQ-----------LYV-----MQSNGSDQK-----RISQDKEASYFDPVWSP 356
              +R G               YV     +Q++  ++K     +++  K+    +   S 
Sbjct: 143 KRKERYGDFHHVGKEHRNNCLYYVEIEKGIQNDKGERKVSSVYQLTNGKDFYIHNFDISN 202

Query: 357 QGDLIAF----TKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS---- 407
            G  + F    +        + ++  +  + + + V+     +  +SP G  + +S    
Sbjct: 203 DGTKVVFMATPSLNDHMNGDLYILDVEAEELQKMNVDKLLGGSVCFSPEGSKICYSASIR 262

Query: 408 -----RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                R    ++  ++Y ++     + L N  +     QW
Sbjct: 263 EKEYYRNHIQESTLEIYDMNTGEVIQPLTNFDSTVMPLQW 302



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 44/111 (39%), Gaps = 13/111 (11%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPS 400
           +      S  G  +AF K +        +  + + +KD  Q   L + D +   P WSP 
Sbjct: 19  TLSGTNISDDGKNVAFVKKTANWEDNTYRNYVWIYEKDKEQSYPLTDGDIDSTHPLWSPD 78

Query: 401 GRSLIFSR-KKDGDTGSKLYSIDLNGRNETLINT-----PAYASDPQWVGF 445
            +++ +     DG   ++++   ++G ++  I         +  +P   GF
Sbjct: 79  SKTIAYLSPGGDGANTNQIFVKSIDGGSKVQITDEKEGVNTFKREPTGKGF 129



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 84/272 (30%), Gaps = 57/272 (20%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--YD 232
           + FV ++        +N + + ++D     Y     D     P +SP+ + +AY +   D
Sbjct: 32  VAFVKKTANWEDNTYRNYVWIYEKD-KEQSYPLTDGDIDSTHPLWSPDSKTIAYLSPGGD 90

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------------KDE 280
             +  ++++         +       +    R    GK      Q            +  
Sbjct: 91  GANTNQIFVKSIDGGSKVQITDEKEGVNTFKR-EPTGKGFYYVAQSKECEEIKKRKERYG 149

Query: 281 AMD----------IYSVDLQSN-----------ATERLTNTLFINISAS-YSPDSSQIVF 318
                        +Y V+++             +  +LTN     I     S D +++VF
Sbjct: 150 DFHHVGKEHRNNCLYYVEIEKGIQNDKGERKVSSVYQLTNGKDFYIHNFDISNDGTKVVF 209

Query: 319 ESDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---------- 364
            +     +     LY++     + ++++ DK        +SP+G  I ++          
Sbjct: 210 MATPSLNDHMNGDLYILDVEAEELQKMNVDKLLG-GSVCFSPEGSKICYSASIREKEYYR 268

Query: 365 -KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                    I  M   G   + L    +   P
Sbjct: 269 NHIQESTLEIYDMNT-GEVIQPLTNFDSTVMP 299


>gi|284028162|ref|YP_003378093.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Kribbella flavida DSM 17836]
 gi|283807455|gb|ADB29294.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kribbella flavida DSM 17836]
          Length = 596

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 78/248 (31%), Gaps = 17/248 (6%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           D+   +   +   + R + V  +       + L V    G          +    E  + 
Sbjct: 143 DVGGYLATVEPSPDDRWVGVIRAGGPANSGHVLLVETSTGRITDVTAYEDETCALELSWL 202

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  ++    D + V+  D       + + +  S ++    S +G+  L++   D 
Sbjct: 203 PDSTGLLVSSDAGRDRIAVFRYDVADGSTTELVTDAESDLIGWA-SPSGQHLLVARSADG 261

Query: 281 AMDIYSVDLQSNATERLTNTLF------INISASYSPDSSQIVFE-SDREGKEQLYVMQS 333
           A+ +     +      +           +  +  +SPD  Q+V   S       ++    
Sbjct: 262 AVTLALHSTEGERLTPIELPPGGCAALLVESAPHWSPDGGQLVITYSSPAEPPYVFRYAV 321

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ---ERLLVEDS 390
              +   +   + A     +  P    +A   F GE+  + V + +        ++V   
Sbjct: 322 ATGETVAVRAPEAAELPAGLRQPSSHRVA--SFDGEQVPVFVYRPESGGDGSAVIVVHGG 379

Query: 391 NLQAPTWS 398
               P W 
Sbjct: 380 ----PEWH 383



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 68/204 (33%), Gaps = 17/204 (8%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           +V + T    D+    +           + +    +     S + +   +      A   
Sbjct: 113 RVLFTTNRRNDVDFDLVALDLGTGTQTTLYDVGGYLATVEPSPDDRWVGVIRAGGPANSG 172

Query: 285 YSVDLQSNATERLTNTLFINIS-----ASYSPDSSQIVFESDREGKEQL--YVMQSNGSD 337
           + + +++ +T R+T+             S+ PDS+ ++  SD  G++++  +        
Sbjct: 173 HVLLVET-STGRITDVTAYEDETCALELSWLPDSTGLLVSSD-AGRDRIAVFRYDVADGS 230

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--- 394
              +  D E+       SP G  +   + +     + +   +G +   +       A   
Sbjct: 231 TTELVTDAESDLIGWA-SPSGQHLLVARSADGAVTLALHSTEGERLTPIELPPGGCAALL 289

Query: 395 ----PTWSPSGRSLIFSRKKDGDT 414
               P WSP G  L+ +     + 
Sbjct: 290 VESAPHWSPDGGQLVITYSSPAEP 313



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 69/191 (36%), Gaps = 22/191 (11%)

Query: 271 RALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-- 326
           R L +  +  D   D+ ++DL +     L +      +   SPD   +     R G    
Sbjct: 113 RVLFTTNRRNDVDFDLVALDLGTGTQTTLYDVGGYLATVEPSPDDRWV--GVIRAGGPAN 170

Query: 327 --QLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK---KDG 380
              + +++++      ++  + E    +  W P    +  +  +G    I V +    DG
Sbjct: 171 SGHVLLVETSTGRITDVTAYEDETCALELSWLPDSTGLLVSSDAGRD-RIAVFRYDVADG 229

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA--- 437
           S   L+ +  +      SPSG+ L+ +R  DG     L+S    G   T I  P      
Sbjct: 230 STTELVTDAESDLIGWASPSGQHLLVARSADGAVTLALHS--TEGERLTPIELPPGGCAA 287

Query: 438 ----SDPQWVG 444
               S P W  
Sbjct: 288 LLVESAPHWSP 298


>gi|153868173|ref|ZP_01998235.1| WD-40 repeat protein [Beggiatoa sp. SS]
 gi|152144506|gb|EDN71764.1| WD-40 repeat protein [Beggiatoa sp. SS]
          Length = 200

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 67/185 (36%), Gaps = 9/185 (4%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPD 312
              +  I A   S +G + L++   D+   +++V  Q+      L   +     A +SP+
Sbjct: 5   TGHQDEIKAVDLSPDG-QLLVTASNDQTARLWAV--QTGQQRFELNGHISTVSQAKFSPN 61

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +++  S     +   +       Q+ + +  E +     +SP G  +       +   
Sbjct: 62  GEEVITTS---WDKTARLWDVETGKQRLVLEGHERAINHLAFSPDGRRVVTVS-DDKTAR 117

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +  +K   S   L   D  +    +S   + L F      D  ++L+ I +    + LI+
Sbjct: 118 LWDVKTGRSLLVLAGHDQPVIQVVFSADKQQLQFVT-VSKDKTARLWRIPVFPTPQNLID 176

Query: 433 TPAYA 437
               +
Sbjct: 177 YARDS 181



 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 7/145 (4%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R+        + + +FSPN ++V   ++D        L D    +    +      I  
Sbjct: 42  QRFELNGHISTVSQAKFSPNGEEVITTSWDK----TARLWDVETGKQRLVLEGHERAINH 97

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESD 321
             FS +G+R +++V  D+   ++ V     +   L       I   +S D  Q+ F    
Sbjct: 98  LAFSPDGRR-VVTVSDDKTARLWDV-KTGRSLLVLAGHDQPVIQVVFSADKQQLQFVTVS 155

Query: 322 REGKEQLYVMQSNGSDQKRISQDKE 346
           ++   +L+ +    + Q  I   ++
Sbjct: 156 KDKTARLWRIPVFPTPQNLIDYARD 180



 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 46/109 (42%), Gaps = 5/109 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E V++     +  + D +    R +    ++ +    FSP+ ++V   + D        L
Sbjct: 63  EEVITTSWDKTARLWDVETGKQRLVLEGHERAINHLAFSPDGRRVVTVSDDK----TARL 118

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-LISVQKDEAMDIYSVDL 289
            D +  R+   +      ++   FS++ ++   ++V KD+   ++ + +
Sbjct: 119 WDVKTGRSLLVLAGHDQPVIQVVFSADKQQLQFVTVSKDKTARLWRIPV 167


>gi|312948256|gb|ADR29083.1| hypothetical protein NRG857_18375 [Escherichia coli O83:H1 str. NRG
           857C]
          Length = 404

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   GS+ ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGSEPRQLTHNKTDIQSAFNWHPSGEWLGFVLEN----RIACAHAQSGKVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +          +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWMED------GQLWITETD 403



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     ++
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGSEPRQLTHNKTDIQSAFNWHPSGEWLGFVLE 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 352 N----RIACAHAQSGKVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 403



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 8/114 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G+  R LT ++  I     + P+ + + +    + 
Sbjct: 298 TQIAFLM---RDDNGIVQLWLISPQGSEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--EN 352

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            I   +    +++   +   N  S   A  FS +G+       +D  + I   D
Sbjct: 353 RIACAHAQSGKVEYLTENHANPPSAD-AVVFSPDGQWLAW--MEDGQLWITETD 403


>gi|222035403|emb|CAP78148.1| Uncharacterized protein yidR [Escherichia coli LF82]
          Length = 416

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   GS+ ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGSEPRQLTHNKTDIQSAFNWHPSGEWLGFVLEN----RIACAHAQSGKVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +          +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWMED------GQLWITETD 415



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     ++
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGSEPRQLTHNKTDIQSAFNWHPSGEWLGFVLE 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 364 N----RIACAHAQSGKVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 415



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 8/114 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G+  R LT ++  I     + P+ + + +    + 
Sbjct: 310 TQIAFLM---RDDNGIVQLWLISPQGSEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--EN 364

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            I   +    +++   +   N  S   A  FS +G+       +D  + I   D
Sbjct: 365 RIACAHAQSGKVEYLTENHANPPSAD-AVVFSPDGQWLAW--MEDGQLWITETD 415


>gi|315128132|ref|YP_004070135.1| hypothetical protein PSM_A3070 [Pseudoalteromonas sp. SM9913]
 gi|315016645|gb|ADT69983.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 937

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 47/284 (16%), Positives = 91/284 (32%), Gaps = 50/284 (17%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR----------------IG 254
           D     P  S +  K+A    D++   ++ +  T  +   +                 + 
Sbjct: 290 DLYASNPALSNDGSKIAIVERDEKSKTKLIIYSTEDNTKARDKFTKVQKELLENDKQDVP 349

Query: 255 NFRSMIL-----------------APRFSSNGK--RALISVQKDEAM----DIYSVDLQS 291
           +   ++                   P++ +N        S +         DI+S +  +
Sbjct: 350 DTPPIVFKREQKQVLNQINRAGIANPQWVNNNTLYFNAYSSEGSGIYNKVSDIFSYNTDT 409

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYF 350
              E+LT    I    S + D   +  E  R G  +L  +  N      + S+  + +Y 
Sbjct: 410 GNIEQLTELAGIRRF-SVTRDGETLYGEQIRAGYSELVKVDLNTQTITPLFSKSLKTTYD 468

Query: 351 DPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIF 406
            P  SP    +A+   S  E + + +    G     +   +  Q    P++S +G S+ F
Sbjct: 469 YPTLSPDETKLAYLSASLNENWQLYIQGVGGDTRESVPMPNGYQYLSQPSFSQNGESIYF 528

Query: 407 SRKKDGDTGSKLYSIDLN-----GRNETLINTPAYASDPQWVGF 445
               +  T    Y I  N        +  +  P  A D   + F
Sbjct: 529 VAGLNNKTDIYNYHIKNNTLTRLTNGQEALAYPIEAEDGSLLYF 572



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 12/161 (7%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALI 274
            P  SP++ K+AY +    +  ++Y+     D        N    +  P FS NG+    
Sbjct: 469 YPTLSPDETKLAYLSASLNENWQLYIQGVGGDTRESVPMPNGYQYLSQPSFSQNGESIYF 528

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               +   DIY+  +++N   RLTN          + D S + F            + ++
Sbjct: 529 VAGLNNKTDIYNYHIKNNTLTRLTNGQEALAYPIEAEDGSLLYFS-----------INAD 577

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           G D K ++        D   + +  L+   K +     I  
Sbjct: 578 GPDVKTLTIKSRTVVTDLAVNSEAPLLMVNKHTLPPAKIYT 618



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 75/229 (32%), Gaps = 28/229 (12%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           AN +++    +  L+   +S     +         +  ++  +T      +++     + 
Sbjct: 373 ANPQWV---NNNTLYFNAYSSEGSGI------YNKVSDIFSYNTDTG-NIEQLTELAGIR 422

Query: 261 LAPRFS--SNGKRALISVQKDEAMDIYSVDLQSNATERL------TNTLFINISASYSPD 312
              RFS   +G+       +    ++  VDL +     L      T   +     + SPD
Sbjct: 423 ---RFSVTRDGETLYGEQIRAGYSELVKVDLNTQTITPLFSKSLKTTYDY----PTLSPD 475

Query: 313 SSQIVFESDR-EGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            +++ + S       QLY+    G  ++ +   +       P +S  G+ I F      K
Sbjct: 476 ETKLAYLSASLNENWQLYIQGVGGDTRESVPMPNGYQYLSQPSFSQNGESIYFVAGLNNK 535

Query: 371 FAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKL 418
             I       +    L       A P  +  G  L FS   DG     L
Sbjct: 536 TDIYNYHIKNNTLTRLTNGQEALAYPIEAEDGSLLYFSINADGPDVKTL 584


>gi|290561641|gb|ADD38220.1| WD repeat-containing protein 5 [Lepeophtheirus salmonis]
          Length = 319

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 77/210 (36%), Gaps = 19/210 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            ++++      + +   +FSPN + +A ++ D      + +  +   +  K I   +  I
Sbjct: 20  YSLKFTLAGHTKGVSAVKFSPNGEWLASSSADK----LIKVWGSYDGKFEKTISGHKLGI 75

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + I+ +       + L          +++P S+ +V  S
Sbjct: 76  SDVAWSSD-SRLLVSASDDKTLKIWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLVVSGS 133

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I     D 
Sbjct: 134 F---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW----DT 185

Query: 381 SQERLLVEDSNLQAP-----TWSPSGRSLI 405
           +  + L    +   P      +SP+G+ ++
Sbjct: 186 ASGQCLKTLIDNDNPPVSFVKFSPNGKYIL 215


>gi|114668575|ref|XP_001149295.1| PREDICTED: WD repeat and SOCS box-containing 1 isoform 2 [Pan
           troglodytes]
          Length = 411

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 141 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 200

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 201 RGHQNWVYSCAFSPDSSILC---SVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 257

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 258 GALLATASYDT---RVYIWDPHNGD--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 312

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 313 GLHVA---SLADDKMVRFWRIDED 333



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 80/259 (30%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++           R +  T + D               ++ VS S   
Sbjct: 141 RIKIWDVYTGKLLL--NLVDHTEVVRDL--TFAPD-------------GSLILVSASRDK 183

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L +   
Sbjct: 184 TL---RVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSILCSV----GASKAVFLWNMDK 235

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + I+  D  +               
Sbjct: 236 YTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFPPPT 292

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   +   +D +   + + +  +     +++          
Sbjct: 293 PIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 347

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 348 AFSTDGSVLAAGTHDGSVY 366



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L +   +    +++PD S I+  + R+   +++ 
Sbjct: 132 LLATGLNNGRIKIW--DVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWD 189

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K + +  +   +   +SP   ++     S   F +  M K     +L     
Sbjct: 190 LKDDGNMMKVL-RGHQNWVYSCAFSPDSSILCSVGASKAVF-LWNMDKYTMIRKLEGHHH 247

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 248 DVVACDFSPDGALLATASY 266



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 4/99 (4%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 139 NGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 198

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +L    N   +  +SP   S++ S          L+++D
Sbjct: 199 VLRGHQNWVYSCAFSPDS-SILCS--VGASKAVFLWNMD 234


>gi|17228167|ref|NP_484715.1| WD repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17130017|dbj|BAB72629.1| WD-repeat protein [Nostoc sp. PCC 7120]
          Length = 265

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 85/253 (33%), Gaps = 18/253 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG   N + + + +   +          +     SPN + VA  + D+     + L + 
Sbjct: 14  VSGSWDNRIKLWNLETNTLISTLDGHKDDVQTVAISPNGKLVASGSADN----TIKLWNL 69

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFI 303
              +    + N      +  FS + +  + S   + ++ I+ +   +      +      
Sbjct: 70  DTHKQLLTLQNAD-WARSIAFSPDNQTLV-SGSTNGSIKIWQLTTPRPIPLYTIIGHSQA 127

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S   SPD   +   S     + + +      +  R       + +   +SP G  +A 
Sbjct: 128 VRSVVISPDGQTLASGSV---DQTIKLWSWRDRNLLRTLTGHSGAVWSVAFSPNGQTLAS 184

Query: 364 TKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    I        Q     +   + + + T+SP G++L       GD   KL+SI
Sbjct: 185 GSNDRT---IKRWDIATGQLIDNFVGHTNPVWSVTFSPDGQTLA---SGSGDQTIKLWSI 238

Query: 422 DLNGRNETLINTP 434
             +  ++T   + 
Sbjct: 239 KSDTSSQTHTQSN 251



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 68/201 (33%), Gaps = 9/201 (4%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG   N++ + + D  + + LT           FSP+ Q +   +      ++++ + 
Sbjct: 55  VASGSADNTIKLWNLD-THKQLLTLQNADWARSIAFSPDNQTL--VSGSTNGSIKIWQLT 111

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T        I      + +   S +G+    S   D+ + ++S     N    LT     
Sbjct: 112 TPRPIPLYTIIGHSQAVRSVVISPDGQTLA-SGSVDQTIKLWS-WRDRNLLRTLTGHSGA 169

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SP+   +   S+      +                     +   +SP G  +A 
Sbjct: 170 VWSVAFSPNGQTLASGSN---DRTIKRWDIATGQLIDNFVGHTNPVWSVTFSPDGQTLA- 225

Query: 364 TKFSGEKFAIGVMKKDGSQER 384
           +    +   +  +K D S + 
Sbjct: 226 SGSGDQTIKLWSIKSDTSSQT 246



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 84/226 (37%), Gaps = 20/226 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + +   ++D+    R+ L +   +     +   +  +     S NGK    S   D
Sbjct: 7   SVDGRILVSGSWDN----RIKLWNLETNTLISTLDGHKDDVQTVAISPNGKLVA-SGSAD 61

Query: 280 EAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             + ++++D      + LT        S ++SPD+  +V  S   G  +++ + +     
Sbjct: 62  NTIKLWNLD---THKQLLTLQNADWARSIAFSPDNQTLVSGST-NGSIKIWQLTTPRPIP 117

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTW 397
                    +    V SP G  +A +    +   +   + D +  R L      + +  +
Sbjct: 118 LYTIIGHSQAVRSVVISPDGQTLA-SGSVDQTIKLWSWR-DRNLLRTLTGHSGAVWSVAF 175

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           SP+G++L        D   K + I   G    LI+     ++P W 
Sbjct: 176 SPNGQTLA---SGSNDRTIKRWDI-ATG---QLIDNFVGHTNPVWS 214



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 44/114 (38%), Gaps = 5/114 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG +  ++ +      N+          ++   FSPN Q +A  + D      +  
Sbjct: 138 QTLASGSVDQTIKLWSWRDRNLLRTLTGHSGAVWSVAFSPNGQTLASGSNDR----TIKR 193

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            D    +         + + +  FS +G+    S   D+ + ++S+   +++  
Sbjct: 194 WDIATGQLIDNFVGHTNPVWSVTFSPDGQTLA-SGSGDQTIKLWSIKSDTSSQT 246


>gi|19113785|ref|NP_592873.1| transcriptional corepressor Tup11 [Schizosaccharomyces pombe 972h-]
 gi|1175392|sp|Q09715|TUP11_SCHPO RecName: Full=Transcriptional repressor tup11
 gi|929896|emb|CAA90594.1| transcriptional corepressor Tup11 [Schizosaccharomyces pombe]
          Length = 614

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 102/305 (33%), Gaps = 44/305 (14%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           ++DV+  K++                H  S D  + +      F+    ++    V+G  
Sbjct: 338 VFDVQTGKKLFTL-------------HEESPDPSRDLYVRTIAFSPDGKYL----VTGTE 380

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              + + D     +RY+    +Q ++   FS N + +   + D        L D    + 
Sbjct: 381 DRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDR----TARLWDVETGQC 436

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             ++    + + A   S N +   +    D+ + ++SV       ERL        S ++
Sbjct: 437 ILKL-EIENGVTAIAISPNDQFIAV-GSLDQIIRVWSV--SGTLVERLEGHKESVYSIAF 492

Query: 310 SPDSSQI----------VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           SPDSS +          V+E        L  ++  G  +   +   +        SP   
Sbjct: 493 SPDSSILLSGSLDKTIKVWELQATRSVGLSAIKPEGICKATYTGHTD-FVLSVAVSPDSR 551

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSK 417
               +                 Q  L  +       +  +SP GR   F+    GD  ++
Sbjct: 552 W-GLSGSKDRSMQFW--DLQTGQSYLTCQGHKNSVISVCFSPDGRQ--FASG-SGDLRAR 605

Query: 418 LYSID 422
           ++SID
Sbjct: 606 IWSID 610



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 78/234 (33%), Gaps = 46/234 (19%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR I  G        RLWDV+  + I+                    +I   +T      
Sbjct: 414 GRFIVSGSGDRTA--RLWDVETGQCILKL------------------EIENGVTAIAISP 453

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           N + + V      G +   + V    G  +  L   ++ + +   FSP+   +   + D 
Sbjct: 454 NDQFIAV------GSLDQIIRVWSVSGTLVERLEGHKESV-YSIAFSPDSSILLSGSLD- 505

Query: 234 EDILRVYLMDTRIDRAPKRI----------GNFRSMILAPRFSSNGKRALISVQKDEAMD 283
              ++V+ +          I                +L+   S + +  L S  KD +M 
Sbjct: 506 -KTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGL-SGSKDRSMQ 563

Query: 284 IYSVDLQSNATERLTN--TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +  DLQ+     LT        IS  +SPD  Q    S  + + +++ +    
Sbjct: 564 FW--DLQTGQ-SYLTCQGHKNSVISVCFSPDGRQFASGSG-DLRARIWSIDPAS 613


>gi|124003182|ref|ZP_01688032.1| WD-40 repeat protein [Microscilla marina ATCC 23134]
 gi|123991280|gb|EAY30711.1| WD-40 repeat protein [Microscilla marina ATCC 23134]
          Length = 999

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 74/228 (32%), Gaps = 32/228 (14%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V    G N       R+  +F  ++                     +  T +   P  + 
Sbjct: 411 VWQYIGENKEQSPTKRNSWVFNEKWD-------------------DIKLTSLKYLPVSLT 451

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             ++ + +  FS + +  ++S   D    I+  D Q    + L         A +SPD  
Sbjct: 452 GHKAAVFSVNFSPDSRY-VVSASADATAKIW--DNQGRLVQTLIGHSKAVTKALFSPDGQ 508

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +++  SD        +    G+    +S   +       +S  G LI           I 
Sbjct: 509 KVLTASD---DFTAKLWNKQGNLLANLS-GHKGKVLSIDFSANGKLILTAAADNT---IK 561

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +    G     +     L+   ++P+ ++++   KK      K++ ID
Sbjct: 562 LWNNQGRLLHTMQHKYALKEARFAPNSKNVLSVSKKG---PVKIWYID 606



 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 19/157 (12%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G        V+ SV+S        V   DG  +  +  S +Q +    FS +   +    
Sbjct: 621 GVSKDSKYLVTTSVISETGSG---VWSSDGELLHSIKGSANQAI----FSNDGTHLITIA 673

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRS-------MILAPRFSSNGKRALISVQKDEAMD 283
                +  +Y    R        G+++          +  +FS + + A+++   D    
Sbjct: 674 NRTAHLFSIYQKGVRTVLIKNMGGSYKGKGHLQKINNI--QFSPS-QHAIVTASDDYLAK 730

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           I+  D   N    L         A++SP+   I   S
Sbjct: 731 IW--DGSGNFRYNLRGHTNKVNHATFSPNGLHIATAS 765


>gi|114668573|ref|XP_001149775.1| PREDICTED: WD repeat and SOCS box-containing protein 1 isoform 4
           [Pan troglodytes]
          Length = 421

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 211 RGHQNWVYSCAFSPDSSILC---SVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 268 GALLATASYDT---RVYIWDPHNGD--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 322

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 323 GLHVA---SLADDKMVRFWRIDED 343



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 80/259 (30%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++           R +  T + D               ++ VS S   
Sbjct: 151 RIKIWDVYTGKLLL--NLVDHTEVVRDL--TFAPD-------------GSLILVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L +   
Sbjct: 194 TL---RVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSILCSV----GASKAVFLWNMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + I+  D  +               
Sbjct: 246 YTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFPPPT 302

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   +   +D +   + + +  +     +++          
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 357

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 358 AFSTDGSVLAAGTHDGSVY 376



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L +   +    +++PD S I+  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K + +  +   +   +SP   ++     S   F +  M K     +L     
Sbjct: 200 LKDDGNMMKVL-RGHQNWVYSCAFSPDSSILCSVGASKAVF-LWNMDKYTMIRKLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 258 DVVACDFSPDGALLATASY 276



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 4/99 (4%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 149 NGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 208

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +L    N   +  +SP   S++ S          L+++D
Sbjct: 209 VLRGHQNWVYSCAFSPDS-SILCS--VGASKAVFLWNMD 244


>gi|285019754|ref|YP_003377465.1| hypothetical protein XALc_2994 [Xanthomonas albilineans GPE PC73]
 gi|283474972|emb|CBA17471.1| hypothetical protein XALc_2994 [Xanthomonas albilineans]
          Length = 299

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 60/191 (31%), Gaps = 28/191 (14%)

Query: 264 RFSSNGKRALISVQ----KDEAMDIYSVDLQSNATE------RLTNTLFINISASYSPDS 313
             +++G+  + +           D++   L+              N+        +S D 
Sbjct: 44  SVAADGQHIVWASPDRAGGPGGGDLWQAVLRDGRWRDPQPLPPPVNSASAETDPFFSADG 103

Query: 314 SQIVFESDREGKEQ-------LYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFT 364
             + F SDR G            +        + +    +       P  S  G  + F 
Sbjct: 104 RWLYFASDRPGGNGGSDLYRAPVLADGRYGPPQNLGPAVNSRGDERAPTLSLDGTRLLFA 163

Query: 365 KFSG---EKFAIGVMKKDGS-----QERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTG 415
                      + V + DG      Q  + V  ++ +    W   GR+L+F+R +DG   
Sbjct: 164 STGHGGAGGLDLFVARLDGQTFAHPQALVGVNSADDETDAAWLGDGRALLFARARDGQAS 223

Query: 416 SKLYSIDLNGR 426
             L +   +GR
Sbjct: 224 QVLLAQCADGR 234



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 62/171 (36%), Gaps = 21/171 (12%)

Query: 175 SRILFVSESVVSGIIKNSLC-VMDRDGA--NIRYLTP--SRDQILFEPRFSPNQQKVAYA 229
             I++ S     G     L   + RDG   + + L P  +      +P FS + + + +A
Sbjct: 50  QHIVWASPDRAGGPGGGDLWQAVLRDGRWRDPQPLPPPVNSASAETDPFFSADGRWLYFA 109

Query: 230 TYDDE-----DILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEA 281
           +         D+ R  ++       P+ +G   N R    AP  S +G R L +      
Sbjct: 110 SDRPGGNGGSDLYRAPVLADGRYGPPQNLGPAVNSRGDERAPTLSLDGTRLLFASTGHGG 169

Query: 282 M---DIYSVDLQSNA---TERL--TNTLFINISASYSPDSSQIVFESDREG 324
               D++   L        + L   N+      A++  D   ++F   R+G
Sbjct: 170 AGGLDLFVARLDGQTFAHPQALVGVNSADDETDAAWLGDGRALLFARARDG 220



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 62/178 (34%), Gaps = 25/178 (14%)

Query: 218 RFSPNQQKVAYATYDD------EDILRVYLMDTRIDRAPKRI--GNFRSMILAPRFSSNG 269
             + + Q + +A+ D        D+ +  L D R           N  S    P FS++G
Sbjct: 44  SVAADGQHIVWASPDRAGGPGGGDLWQAVLRDGRWRDPQPLPPPVNSASAETDPFFSADG 103

Query: 270 KRALISVQK---DEAMDIY----SVDLQSNATERLT---NTLFINISASYSPDSSQIVFE 319
           +    +  +   +   D+Y      D +    + L    N+     + + S D ++++F 
Sbjct: 104 RWLYFASDRPGGNGGSDLYRAPVLADGRYGPPQNLGPAVNSRGDERAPTLSLDGTRLLFA 163

Query: 320 SDREGKEQ---LYVMQSNGS----DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           S   G      L+V + +G      Q  +  +      D  W   G  + F +    +
Sbjct: 164 STGHGGAGGLDLFVARLDGQTFAHPQALVGVNSADDETDAAWLGDGRALLFARARDGQ 221


>gi|229584036|ref|YP_002842537.1| peptidase S41 [Sulfolobus islandicus M.16.27]
 gi|228019085|gb|ACP54492.1| peptidase S41 [Sulfolobus islandicus M.16.27]
          Length = 1008

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 4/116 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SP   +++  ++   K +L+V + +  + + I + +     +  W P G+  A+    G 
Sbjct: 368 SPGGKKVLLSNN---KLELWVYEIDNDNARLIDKSEYDLILEFDWHPNGEWFAYAFPEGY 424

Query: 370 -KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +I + + DG   R+        +P++ P GR L F   +  D  +     +L+
Sbjct: 425 YTQSIKLARIDGKIVRITTPYGYDFSPSFDPDGRYLYFLAARHLDPTNDKVIFNLS 480



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 66/221 (29%), Gaps = 63/221 (28%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDR 322
            +  G     +   D    ++ + L+     R+T+ L ++I    SP   ++ F     +
Sbjct: 8   PDIRGDLISFTSDDD----VWLLSLKDMKPLRITSGLGVSIRPKISPSGRKVAFTVVWLK 63

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVM 376
            GK+   +        +R++     +     W  + ++I  T F        E + + V 
Sbjct: 64  SGKQGGDIYVVEDGQARRVTYFGSRNSRVANWLSEDEIIVITDFHTPFGQWNEAYKVDVN 123

Query: 377 KKDGSQE-------------RLLVEDSNLQAPTW-------------SPSGRS------- 403
             +  +               +++       P W             S  G         
Sbjct: 124 NGETEKLPFGMLSNIVKRDNVIVIARGYQDLPNWKGYKGGTKGELWISRDGGKTFEKFVS 183

Query: 404 --------------LIFSRKKDGDTGSKLYSIDLNGRNETL 430
                         + F    +G     LYS+DLNG++   
Sbjct: 184 LDGNVSWPMIVKERVYFLSDHEG--VGNLYSVDLNGKDLRR 222



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 54/145 (37%), Gaps = 6/145 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
              +  V+     + L ++ +DG N + +     +I    + SP  +KV  +    E  L
Sbjct: 328 ALPNGDVIGVNDDDKLVILGKDG-NEKVINRDFARIERV-KVSPGGKKVLLSNNKLE--L 383

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            VY +D    R   +  +   +IL   +  NG+    +  +        +        R+
Sbjct: 384 WVYEIDNDNARLIDK--SEYDLILEFDWHPNGEWFAYAFPEGYYTQSIKLARIDGKIVRI 441

Query: 298 TNTLFINISASYSPDSSQIVFESDR 322
           T     + S S+ PD   + F + R
Sbjct: 442 TTPYGYDFSPSFDPDGRYLYFLAAR 466



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 66/225 (29%), Gaps = 59/225 (26%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FS 266
            S   +   P+ SP+ +KVA+     +   +   +    D   +R+  F S       + 
Sbjct: 37  TSGLGVSIRPKISPSGRKVAFTVVWLKSGKQGGDIYVVEDGQARRVTYFGSRNSRVANWL 96

Query: 267 SNGKRALIS---VQKDEAMDIYSVDLQSNATERLTNT---------------LFINISAS 308
           S  +  +I+       +  + Y VD+ +  TE+L                         +
Sbjct: 97  SEDEIIVITDFHTPFGQWNEAYKVDVNNGETEKLPFGMLSNIVKRDNVIVIARGYQDLPN 156

Query: 309 Y-------------SPDSSQ---------------------IVFESDREGKEQLYVMQSN 334
           +             S D  +                     + F SD EG   LY +  N
Sbjct: 157 WKGYKGGTKGELWISRDGGKTFEKFVSLDGNVSWPMIVKERVYFLSDHEGVGNLYSVDLN 216

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           G D +R        ++    +  G  I F         I +   +
Sbjct: 217 GKDLRR--HTNFTDFYCRNANSDGKRIVFQNAGD----IYLYDPE 255



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 37/101 (36%), Gaps = 7/101 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDR 322
            S  GK+ L+S  K   ++++  ++ ++   RL +    ++     + P+     +    
Sbjct: 367 VSPGGKKVLLSNNK---LELWVYEIDNDNA-RLIDKSEYDLILEFDWHPNGEWFAYAFPE 422

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               Q   +        RI+       F P + P G  + F
Sbjct: 423 GYYTQSIKLARIDGKIVRITT-PYGYDFSPSFDPDGRYLYF 462


>gi|146300206|ref|YP_001194797.1| 6-phosphogluconolactonase [Flavobacterium johnsoniae UW101]
 gi|146154624|gb|ABQ05478.1| 6-phosphogluconolactonase [Flavobacterium johnsoniae UW101]
          Length = 370

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 60/341 (17%), Positives = 113/341 (33%), Gaps = 36/341 (10%)

Query: 96  SIPRFQDWNSLGAQVLVTGRVIK--EGKDRLRVEFRLWDVKDRKQIIGKKF--FSSPASW 151
           S   F    +     L+ G      +       EF   D       + K      SP+  
Sbjct: 10  SALAFTTAKAQNKFNLLVGTYTNTCQSNGIYVYEF---DASSGDFKLKKSSENVVSPSYL 66

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
              A    D+ +     E G  ++   F S    SG I   L   D  GA+  +L    D
Sbjct: 67  SVSA----DNKFIYAVNENGSHSTVSAF-SYDSASGKISL-LNKNDALGADPCHLIND-D 119

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           + +    +S     V Y    D  I  V  +     + P      ++ +    FS + K 
Sbjct: 120 KNVIAANYS-GGSIVVYKKNADGSISEVQQLIQHEGKGPNAARQEKAHVHMVTFSPDKKF 178

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-------SYSPDSSQIVFESDREG 324
            L++    + + IY  +  S     LT    +++         ++S D   +    + +G
Sbjct: 179 VLVNDLGLDKIFIYKYNPASKNEI-LTLKSSVDVKPGSGPRHLTFSKDGKFVYLVQELDG 237

Query: 325 KEQLYVMQSNGSDQKRIS--------QDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGV 375
               +     GS  K+I+                    SP G+ +  + +       +  
Sbjct: 238 TLTSFSYDKTGS-LKQIAETSILPKDFKGGTGAAAIKISPDGNFLYVSDRVDANSITVYK 296

Query: 376 MKKDGSQERLLVEDSNLQAPT-WS--PSGRSLIFSRKKDGD 413
           + K+GS E++  + +  + P  ++  P+G  L+   +   D
Sbjct: 297 ILKNGSIEQVEQQSTLGKGPRDFAIDPTGNYLLVGHQYTND 337



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 76/233 (32%), Gaps = 31/233 (13%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF---SSNGKRALISVQKDEA-- 281
            Y      + + VY  D        +  +    +++P +   S++ K    +V ++ +  
Sbjct: 29  TYTNTCQSNGIYVYEFDASSGDFKLKKSSE--NVVSPSYLSVSADNKFI-YAVNENGSHS 85

Query: 282 -MDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS--- 336
            +  +S D  S     L     +         D   ++  +   G   +Y   ++GS   
Sbjct: 86  TVSAFSYDSASGKISLLNKNDALGADPCHLINDDKNVIAANYSGGSIVVYKKNADGSISE 145

Query: 337 DQKRISQDKEASYFDP---------VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            Q+ I  + +                +SP    +       +K  I         E L +
Sbjct: 146 VQQLIQHEGKGPNAARQEKAHVHMVTFSPDKKFVLVNDLGLDKIFIYKYNPASKNEILTL 205

Query: 388 EDSNLQAP-------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           + S    P       T+S  G+ +   ++ DG   S  +S D  G  + +  T
Sbjct: 206 KSSVDVKPGSGPRHLTFSKDGKFVYLVQELDGTLTS--FSYDKTGSLKQIAET 256



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 93/291 (31%), Gaps = 44/291 (15%)

Query: 131 WDVKDRK-QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           +D    K  ++ K             H I+DD         G      + V +    G I
Sbjct: 92  YDSASGKISLLNKNDALGADP----CHLINDDKNVIAANYSGGS----IVVYKKNADGSI 143

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
                ++  +G         +  +     FSP+++   +   +D  + ++++        
Sbjct: 144 SEVQQLIQHEGKGPNAARQEKAHVHMV-TFSPDKK---FVLVNDLGLDKIFIYKYNPASK 199

Query: 250 PKRIGNFRSMILAP-------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----- 297
            + +    S+ + P        FS +GK   +  + D  +  +S D ++ + +++     
Sbjct: 200 NEILTLKSSVDVKPGSGPRHLTFSKDGKFVYLVQELDGTLTSFSYD-KTGSLKQIAETSI 258

Query: 298 --------TNTLFINISASYSPDSSQIVFESDREGKEQL--YVMQSNGS--DQKRISQDK 345
                   T    I      SPD +  ++ SDR     +  Y +  NGS    ++ S   
Sbjct: 259 LPKDFKGGTGAAAI----KISPDGN-FLYVSDRVDANSITVYKILKNGSIEQVEQQSTLG 313

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +    D    P G+ +           I        +     +   L +P 
Sbjct: 314 KGP-RDFAIDPTGNYLLVGHQYTNDIVIFKRDIATGKLTDTGKRIQLCSPV 363


>gi|225012323|ref|ZP_03702759.1| peptidase S9B dipeptidylpeptidase IV domain protein [Flavobacteria
           bacterium MS024-2A]
 gi|225003300|gb|EEG41274.1| peptidase S9B dipeptidylpeptidase IV domain protein [Flavobacteria
           bacterium MS024-2A]
          Length = 717

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 43/309 (13%), Positives = 103/309 (33%), Gaps = 72/309 (23%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---EDILRVYLMDTRIDRA 249
             + D    +++ ++ ++   + EP FSP+  KVAY    +   ++++   ++    D  
Sbjct: 117 YWIFDMRTKDLQKVSDAK---IQEPLFSPDGSKVAYVYRRNLFIKELVTNNVIQITFDGD 173

Query: 250 PKRIGNFR--------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER----- 296
            K I              + A  +S +    +     +  + I+S+D+      +     
Sbjct: 174 YKTISGITDWVYEEEFGFVRAFDWSPDSSEIVYMRFDESKVPIFSMDIYGKDVYQFPYQF 233

Query: 297 -----------LTNTLF---------INISASYSPDSSQIVFE---SDREGKEQL----- 328
                      +T   F         IN          +  +    S  +G   L     
Sbjct: 234 RYPKAGEENSEVTLHRFTIESRKKDKINFE------GERPYYIPRISYAKGANALIIQTL 287

Query: 329 ---------YVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGV 375
                    +   S  +  + I ++KE +Y        +   G  + +T        I  
Sbjct: 288 NRHQNDLKVWRWNSKENTLQLILEEKEETYVSIHDNLKFLEDGSFL-WTSEKDGHNHIYH 346

Query: 376 MKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             ++G   R + +  N +  +   ++P  + + +   +   T   L++I L+G+ +  + 
Sbjct: 347 HNENGVLIRQITK-GNWEVTSLYDYNPKSKEIYYQSVEGSSTERGLFAIKLSGKGKRTLQ 405

Query: 433 TPAYASDPQ 441
            P   ++  
Sbjct: 406 -PTEGTNGA 413



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 28/144 (19%)

Query: 264 RFSSNGKRALISVQKDEAMDI------YSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            FS N ++ L+    D+          +  D+++   +++++   I     +SPD S++ 
Sbjct: 91  SFSKNEEKILLETATDQIYRRSKQAIYWIFDMRTKDLQKVSDAK-IQ-EPLFSPDGSKVA 148

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKE----------------ASYFDPVWSPQGDLI 361
           +   R     L++ +   ++  +I+ D +                       WSP    I
Sbjct: 149 YVYRR----NLFIKELVTNNVIQITFDGDYKTISGITDWVYEEEFGFVRAFDWSPDSSEI 204

Query: 362 AFTKFSGEKFAIGVMKKDGSQERL 385
            + +F   K  I  M   G     
Sbjct: 205 VYMRFDESKVPIFSMDIYGKDVYQ 228



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 112/324 (34%), Gaps = 56/324 (17%)

Query: 157 TISDD-IYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDG------ANIRYLT 207
            +SD  I + +    G   S++ +V      +  ++ N++  +  DG          ++ 
Sbjct: 129 KVSDAKIQEPLFSPDG---SKVAYVYRRNLFIKELVTNNVIQITFDGDYKTISGITDWVY 185

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDIL----------------------------RV 239
                 +    +SP+  ++ Y  +D+  +                              V
Sbjct: 186 EEEFGFVRAFDWSPDSSEIVYMRFDESKVPIFSMDIYGKDVYQFPYQFRYPKAGEENSEV 245

Query: 240 YLMDTRIDRAPKRIGNFRSM--ILAPRFS-SNGKRALI--SVQKDEA-MDIYSVDLQSNA 293
            L    I+   K   NF        PR S + G  ALI  ++ + +  + ++  + + N 
Sbjct: 246 TLHRFTIESRKKDKINFEGERPYYIPRISYAKGANALIIQTLNRHQNDLKVWRWNSKENT 305

Query: 294 TERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            + +        + I+ +  +  D S  ++ S+++G   +Y    NG   ++I++     
Sbjct: 306 LQLILEEKEETYVSIHDNLKFLEDGS-FLWTSEKDGHNHIYHHNENGVLIRQITKGNWEV 364

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                ++P+   I +    G      +  +K  G  +R L         T+S  G    +
Sbjct: 365 TSLYDYNPKSKEIYYQSVEGSSTERGLFAIKLSGKGKRTLQPTEGTNGATFSVGGAY--Y 422

Query: 407 SRKKDGDTGSKLYSIDLNGRNETL 430
                 +    +Y++    +N  L
Sbjct: 423 IHSYSDEKTPPIYTLYNTQKNTPL 446



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 53/141 (37%), Gaps = 19/141 (13%)

Query: 218 RFSPNQQKV----AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            FS N++K+    A           +Y +     +  +++ + +  I  P FS +G +  
Sbjct: 91  SFSKNEEKILLETATDQIYRRSKQAIYWIFDMRTKDLQKVSDAK--IQEPLFSPDGSKVA 148

Query: 274 ISVQKD--------EAMDIYSVDLQSNATERLTNTLFINISAS-----YSPDSSQIVFES 320
              +++          +   + D        +T+ ++           +SPDSS+IV+  
Sbjct: 149 YVYRRNLFIKELVTNNVIQITFDGDYKTISGITDWVYEEEFGFVRAFDWSPDSSEIVYMR 208

Query: 321 DREGKEQLYVMQSNGSDQKRI 341
             E K  ++ M   G D  + 
Sbjct: 209 FDESKVPIFSMDIYGKDVYQF 229


>gi|46445859|ref|YP_007224.1| hypothetical protein pc0225 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399500|emb|CAF22949.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 649

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 82/229 (35%), Gaps = 16/229 (6%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALI 274
            PR SPN Q +AY   D +++L V+L + +     +++    +  I +  +  +G   L 
Sbjct: 44  NPRLSPNGQYLAYLAPDAQNVLNVWLKNLKTAEKDRQVTTDKKRGIRSFLWQFDGDHILY 103

Query: 275 SVQKDE--AMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVM 331
              KD      +Y   +QSN T  LT    +      Y P   Q +         QL+ +
Sbjct: 104 EQDKDGDENWHLYQTHIQSNLTRDLTPYEGVKAEIVQYDPKFPQDLLVQLNLRNPQLFDV 163

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTKFSGEKFAIGVMKKDGSQ------ 382
                  + +  D E       W    +    IA +        I    ++G        
Sbjct: 164 YRLDLQTRNLQLDTENQANVIRWVADHNLCIRIAQSYNDDGSMLIRT--REGKDQSWKEF 221

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +L   + N +   ++   +S+       G+T   L  +DL    + LI
Sbjct: 222 LKLDASEINGEVYGFTADNQSIYLISSLQGNTAGLL-LVDLTTGKQNLI 269



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 69/194 (35%), Gaps = 27/194 (13%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNAT-ERLTNT--L 301
               P+ +         PR S NG+     +      ++++  +L++     ++T     
Sbjct: 28  TTLIPRHLLFGNPEKTNPRLSPNGQYLAYLAPDAQNVLNVWLKNLKTAEKDRQVTTDKKR 87

Query: 302 FINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQ----DKEASYFDPVWS 355
            I  S  +  D   I++E D++G     LY      +  + ++       E   +DP + 
Sbjct: 88  GI-RSFLWQFDGDHILYEQDKDGDENWHLYQTHIQSNLTRDLTPYEGVKAEIVQYDPKF- 145

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-------------QAPTWSPSGR 402
           PQ  L+     + + F +  +       +L  E+                 A +++  G 
Sbjct: 146 PQDLLVQLNLRNPQLFDVYRLDLQTRNLQLDTENQANVIRWVADHNLCIRIAQSYNDDGS 205

Query: 403 SLIFSRKKDGDTGS 416
            LI  R ++G   S
Sbjct: 206 MLI--RTREGKDQS 217


>gi|154295166|ref|XP_001548020.1| hypothetical protein BC1G_13526 [Botryotinia fuckeliana B05.10]
 gi|150844209|gb|EDN19402.1| hypothetical protein BC1G_13526 [Botryotinia fuckeliana B05.10]
          Length = 573

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 82/264 (31%), Gaps = 48/264 (18%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--------FSPNQQKV--AYATYDDED 235
           S + K+ L     D    ++++ +R  I   P         F+P +  +   +       
Sbjct: 92  SHVEKSELYRFIHD--AEQFISFNRSGIEQAPLQIYSSALFFAPKKNIIRQTFKRCIPPW 149

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +  +    +      + +      I    FS NG     S        +   D+ +    
Sbjct: 150 LYEITRKRSNWTPGIQILEGHADFIHDIAFSPNGNMVASSSSDC---QLRLYDVATGRLL 206

Query: 296 RLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           +L +    + ++ A++SPDS  I   SD     ++ +  +   +   I            
Sbjct: 207 QLYHHPISYWDLKATFSPDSRMIASSSD---DAKIRIWNTVTGELLHIFTGHSGVMMASA 263

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              +   + +           V    G      ++L          +SP  + +  S   
Sbjct: 264 SQDRTIRLWYISGEP------VQTLKGHLSGVTKIL----------FSPDSKIIASSS-- 305

Query: 411 DGDTGSKLYSIDLNGRNETLINTP 434
             D   +L+ I      +TLI+ P
Sbjct: 306 -FDKTVRLWDI------KTLIDMP 322



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 97/257 (37%), Gaps = 30/257 (11%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL-------- 178
           + RL+DV   + +   + +  P S+  +  T S D  + I     D   RI         
Sbjct: 194 QLRLYDVATGRLL---QLYHHPISYWDLKATFSPDS-RMIASSSDDAKIRIWNTVTGELL 249

Query: 179 --FVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             F   S V   S     ++ +    G  ++ L      +  +  FSP+ + +A +++D 
Sbjct: 250 HIFTGHSGVMMASASQDRTIRLWYISGEPVQTLKGHLSGVT-KILFSPDSKIIASSSFD- 307

Query: 234 EDILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              +R++ + T ID  P +I     ++ I   + SS+G+   I    +  + +   D+++
Sbjct: 308 -KTVRLWDIKTLIDMPPPKIDGNPIKNGIRGLKLSSDGRMLAIDHFFNRRIRLQ--DVET 364

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
              ++     ++N        +SP++  I          +L+   +              
Sbjct: 365 GEFQQTLFNTWLNYQTQLPIQFSPNNKIIAITKRHSHTIELW--DAAEGKLLHELDSDRE 422

Query: 348 SYFDPVWSPQGDLIAFT 364
           +    ++S    ++ ++
Sbjct: 423 NINWIIFSLDSTMVLWS 439


>gi|326930426|ref|XP_003211348.1| PREDICTED: WD repeat-containing protein 5-like [Meleagris
           gallopavo]
          Length = 334

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 83/226 (36%), Gaps = 20/226 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G      +    
Sbjct: 148 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLX---RIWDTA 201

Query: 380 GSQ-ERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             Q  + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 202 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|317051521|ref|YP_004112637.1| WD-40 repeat-containing protein [Desulfurispirillum indicum S5]
 gi|316946605|gb|ADU66081.1| WD-40 repeat-containing protein [Desulfurispirillum indicum S5]
          Length = 943

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 89/224 (39%), Gaps = 8/224 (3%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDE 280
           Q +V +  +D     ++   D +  +  + +   RS   +  P+F     +  I   ++ 
Sbjct: 317 QDEVYFVRHDGHQRQQLMAYDVKRAQL-RSVAPVRSSRFSLHPKFGILITQPAICNNRNW 375

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            MDIY +D  S  + RLT        A+ +PD+  I+    + G+  L+++  +G   + 
Sbjct: 376 YMDIYHIDPDSGHSTRLTKCQRYRY-ATLTPDAEHIIAVQHQAGQSSLHLLNRDGVLLRE 434

Query: 341 ISQDKEASYFDPVWS-PQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTW 397
           + Q +       +   P  D +  +     + + +       +Q   L+  + +Q  P +
Sbjct: 435 LWQGEPGEVPAHMVHHPHEDWLLISMWRQQQGWNLERFDLRTAQWTPLIRRAGIQAHPHF 494

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              G  ++FS   DG      YS++ +G    L N    A  P 
Sbjct: 495 DHDGSHILFSSDSDGIYNIHQYSLE-SGETTVLTNVRGGAFHPA 537



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 84/264 (31%), Gaps = 16/264 (6%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           TG       +   V     D   R+Q++   +    A  R +A   S     S+  + G 
Sbjct: 310 TGGTASLQDEVYFVR---HDGHQRQQLMA--YDVKRAQLRSVAPVRSSR--FSLHPKFGI 362

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
             ++    +           +  +D D  +   LT  + Q       +P+ + +    + 
Sbjct: 363 LITQPAICNNR----NWYMDIYHIDPDSGHSTRLT--KCQRYRYATLTPDAEHIIAVQHQ 416

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQS 291
                   L    +       G    +        +    LIS+ ++ +  ++   DL++
Sbjct: 417 AGQSSLHLLNRDGVLLRELWQGEPGEVPAHMVHHPHEDWLLISMWRQQQGWNLERFDLRT 476

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                L     I     +  D S I+F SD +G   ++       +   ++  +  + F 
Sbjct: 477 AQWTPLIRRAGIQAHPHFDHDGSHILFSSDSDGIYNIHQYSLESGETTVLTNVRGGA-FH 535

Query: 352 PVWSPQG-DLIAFTKFSGEKFAIG 374
           P  +  G   I F     + + I 
Sbjct: 536 PARTDAGLFYIGFHSGGADLYHIA 559


>gi|242034229|ref|XP_002464509.1| hypothetical protein SORBIDRAFT_01g019860 [Sorghum bicolor]
 gi|241918363|gb|EER91507.1| hypothetical protein SORBIDRAFT_01g019860 [Sorghum bicolor]
          Length = 530

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 81/203 (39%), Gaps = 8/203 (3%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +       ++  RFS N   +A ++ D   I+     D  + +     G+ + +     
Sbjct: 224 QILCGHSNEVWFVRFSNNGNYLASSSSDCTAIIWKVEKDDTLTKKHCLEGHQKPISF-VA 282

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-- 322
           +S N  R L++    E++ +++VD      +   +  +I  S ++ P+S +IV  S    
Sbjct: 283 WSPN-DRMLLTCGTGESLKLWNVDTGECNLKFRGSVDYIISSCAWFPNSEKIVCASSEPA 341

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               +++     G + +  + D+     D   +P G  + F       + I + +    +
Sbjct: 342 SSPNRIFTCDLEGQELEVWAGDRIPKVSDLAVTPDGRHLIFVSC----YDIWIRELPKGR 397

Query: 383 ERLLVEDSNLQAPTWSPSGRSLI 405
           E    E   + + + S  G+SL+
Sbjct: 398 EWRFREKQTISSVSLSGDGQSLV 420


>gi|164660164|ref|XP_001731205.1| hypothetical protein MGL_1388 [Malassezia globosa CBS 7966]
 gi|159105105|gb|EDP43991.1| hypothetical protein MGL_1388 [Malassezia globosa CBS 7966]
          Length = 601

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 71/208 (34%), Gaps = 24/208 (11%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR----SMILAPRF 265
            D ++   RFSP+ +   Y         +++   T       +  +        I +  F
Sbjct: 291 HDSVVCCVRFSPDGK---YVATGCNRSAQIFEAATGTKTCVLQDTSAPVQGDLYIRSVCF 347

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREG 324
           S +GK    +  +D  + I+  D+     +  LT       S  +S +   +   S   G
Sbjct: 348 SPDGKYLA-TGAEDRQIRIW--DIAEKKIKMLLTGHKQEIYSLDFSQNGRILASGS---G 401

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDP-----VWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            + + +  +    +  +        + P       SP G L+A          + +    
Sbjct: 402 DKTVRLWNAENGTELHVLYTSPGLNYGPGVTTVTLSPDGRLVAAGALDT---FVRLWDTK 458

Query: 380 GSQERLLVEDSNL--QAPTWSPSGRSLI 405
             + R  ++       + +++P G+SL+
Sbjct: 459 TGKLRCRLKGHRDSIYSVSFTPDGQSLV 486



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 74/212 (34%), Gaps = 32/212 (15%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-----RFSPNQQKVAYATYDDEDILRVY 240
           SG    ++ + + +     ++  +   + + P       SP+ + VA    D      V 
Sbjct: 398 SGSGDKTVRLWNAENGTELHVLYTSPGLNYGPGVTTVTLSPDGRLVAAGALDT----FVR 453

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--- 297
           L DT+  +   R+   R  I +  F+ +G+  + S   D+ + ++ +     A + L   
Sbjct: 454 LWDTKTGKLRCRLKGHRDSIYSVSFTPDGQSLV-SGSLDKTLKLWDLTSIIKALDSLDDE 512

Query: 298 -----------TNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDK 345
                      T      +S S SP+S  I   S DR     +       +  + + Q  
Sbjct: 513 ISNSTLCKATFTGHKDYVLSVSCSPESRWIASGSKDR----CVQFWDMKTAQTQLVLQGH 568

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           + S      SP  +L+A        F   +  
Sbjct: 569 KNSVIAIHLSPSNNLLA---TGSGDFHARIWS 597


>gi|118397029|ref|XP_001030850.1| hypothetical protein TTHERM_01006580 [Tetrahymena thermophila]
 gi|89285166|gb|EAR83187.1| hypothetical protein TTHERM_01006580 [Tetrahymena thermophila SB210]
          Length = 2424

 Score = 60.8 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 92/233 (39%), Gaps = 25/233 (10%)

Query: 186  SGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +G +  +  + D D   +I+ +     +I     FSP+ + +A ++Y  ++  +++ ++ 
Sbjct: 1847 TGSLDKTCKIWDLDKLQHIKTIEDPTSEICQV-AFSPDSKFLATSSY--QNTCKIWNVEN 1903

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA---MDIYSVDLQSNATERL---- 297
              +          ++I    FS++G     + ++  +   ++I+ V       E+L    
Sbjct: 1904 EFNILKTIQTGDDNIICHIAFSTDGNYLATTTRQGNSVCMINIWKVKNDG--FEQLKTIE 1961

Query: 298  TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSP 356
            T       S ++S D   +   S   G   ++        QK I+  ++ +      +S 
Sbjct: 1962 TGHTNEISSLAFSADCKYLA--SGSHGACNIW--NVQDGFQKEITIKEDINKVSSIHFSA 2017

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI 405
                +A + F  +   I  ++   ++ +L+ +    ++      +S  G+ L 
Sbjct: 2018 DSKYLATSSFDDKTCQIWNVE---NKFKLINKIQGHESCIFSIAFSADGKYLA 2067



 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 85/227 (37%), Gaps = 17/227 (7%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-- 260
            ++ +    D I+    FS +   +A  T     +  + +   + D   +           
Sbjct: 1908 LKTIQTGDDNIICHIAFSTDGNYLATTTRQGNSVCMINIWKVKNDGFEQLKTIETGHTNE 1967

Query: 261  -LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIV 317
              +  FS++ K          A +I+  ++Q    + +T    IN   S  +S DS  + 
Sbjct: 1968 ISSLAFSADCKYLA--SGSHGACNIW--NVQDGFQKEITIKEDINKVSSIHFSADSKYLA 2023

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              S  +   Q++ +++      +I Q  E+  F   +S  G  +A T    +   +  ++
Sbjct: 2024 TSSFDDKTCQIWNVENKFKLINKI-QGHESCIFSIAFSADGKYLA-TGSKDKTCKLWNLE 2081

Query: 378  KDGSQERLLVEDS---NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +       ++ D+   N+ +  +S   + L       GD   K++S+
Sbjct: 2082 QGFELMNQIIGDNNYLNVCSAIFSSDNKYLA---TVQGDNTCKIWSV 2125



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 79/211 (37%), Gaps = 23/211 (10%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISV 276
             FSP+ + +A ++        ++    +  +  K I   ++ ++ +  FS +GK   ++ 
Sbjct: 1707 AFSPDGKYLAISS---NKKTSIFQNKEKGFQLIKSIDEGQNKIVNSIVFSEDGKYFAMAS 1763

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + +       +++++N     T     +   S ++S D   +V  S     +   ++   
Sbjct: 1764 EDN---TCKILNVENNFECINTIEGHTDSVSSVAFSADGKYLVTGSQ----DNTCILWEV 1816

Query: 335  GSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             ++ + I   K  +       +S     +A      +   I     D  Q    +ED   
Sbjct: 1817 KNELQMIHTIKGHTKKISSVAFSANNKYLATGSLD-KTCKIW--DLDKLQHIKTIEDPTS 1873

Query: 393  Q--APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +     +SP  + L  S  ++     K++++
Sbjct: 1874 EICQVAFSPDSKFLATSSYQN---TCKIWNV 1901



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 62/212 (29%), Gaps = 22/212 (10%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             F+ + +   Y      D +   L      +  + I   +  I    FS +GK   IS  
Sbjct: 1664 SFTSDGK---YLAIKINDKICKILNTGNKFKLIQSIDEGQVQISQIAFSPDGKYLAISSN 1720

Query: 278  KDEAMDIY-------SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            K  ++             +     +       I  S  +S D       S+ +   ++  
Sbjct: 1721 KKTSIFQNKEKGFQLIKSIDEGQNK-------IVNSIVFSEDGKYFAMASE-DNTCKILN 1772

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +++N      I +    S     +S  G  +             V  +      +     
Sbjct: 1773 VENNFECINTI-EGHTDSVSSVAFSADGKYLVTGSQDNTCILWEVKNELQMIHTIKGHTK 1831

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             + +  +S + + L        D   K++ +D
Sbjct: 1832 KISSVAFSANNKYLATGSL---DKTCKIWDLD 1860


>gi|320164858|gb|EFW41757.1| Wdr5 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 339

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 81/229 (35%), Gaps = 24/229 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++Y      + +   +FSP+   +A ++ D      + +   R       +   +  I
Sbjct: 40  YVLKYTLEGHKKAISSVKFSPDGNWLASSSSDK----MIKIWGARDGHFETTLVGHKLGI 95

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+  +   S   D+ + I+  D+ S    + L          +++P S+ I   
Sbjct: 96  SDIAWSSDSTQLA-SASDDKNVKIW--DIVSRTCIKTLVGHTNYVFCVNFNPQSTLIASG 152

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +                       ++  G LI  + + G      +    
Sbjct: 153 SF---DESVRIWDVKTGKCNMTLPAHSDPVSAVHFNRDGTLIVSSSYDG---LCRIWDAS 206

Query: 380 GSQ-ERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             Q  R L+ED    AP     +SP+GR ++ +     D+  +L+S + 
Sbjct: 207 TGQLLRTLIED--DNAPVSFVKFSPNGRYILAATL---DSTLRLWSYNT 250


>gi|295838049|ref|ZP_06824982.1| WD-repeat protein [Streptomyces sp. SPB74]
 gi|295826815|gb|EDY46831.2| WD-repeat protein [Streptomyces sp. SPB74]
          Length = 1631

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 91/325 (28%), Gaps = 37/325 (11%)

Query: 113  TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
            TG V+  G     V  RLWD    +++                HT+   +Y +     G 
Sbjct: 1024 TGAVLATGDGDGVV--RLWDTASGERLHA-----------FPGHTV--LVYTTAFSPDG- 1067

Query: 173  FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                       + +G    ++ + D     +          +F  RFSP+   +A A   
Sbjct: 1068 ---------RLLATGDRSGTVRLWDTRSGELLASLGPHQGPVFRVRFSPDGALLATADEG 1118

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             +D   V +      R    +      +    F   G   L+S   D  + ++       
Sbjct: 1119 IDDHGTVRVWRVSDLRPLHEMHGHTGRVYTLAFHPGGD-LLVSGDTDGGVRLWD-PRTGR 1176

Query: 293  ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ--SNGSDQKRISQ---DKEA 347
                L           ++ D   +       G  +L+ +    +G +           + 
Sbjct: 1177 PGPPLDKGPGGVYQVVFADDGRHLAAC-HATGAVRLWQLSPGPDGYEAAAERFQPTPHQG 1235

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            S +   + P    +  T        I        +  L      + A  +  SG  L   
Sbjct: 1236 SAWACRFRPDDTQLV-TAGDDGVVQIWDAATGQGKPILRGHGRRVNAVAFDASGTRLA-- 1292

Query: 408  RKKDGDTGSKLYSIDLNGRNETLIN 432
                 D   +L+ +    R   L+ 
Sbjct: 1293 -SAGSDGTVRLWDVATGQRTHELLG 1316



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 75/261 (28%), Gaps = 46/261 (17%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             + S     ++ + D       +    R   L    FSP    +A           VYL 
Sbjct: 1290 RLASAGSDGTVRLWDVATGQRTHELLGRGDRLISAAFSPAGTVLA----TAGSTGHVYLW 1345

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            D       + +        A  FS++G+    +   D+++ ++      +   RL     
Sbjct: 1346 DAENGTFLRELDVETDRTWAEAFSADGEEIA-TANDDDSVRLWR-RATGSHGLRLDGHEG 1403

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD---------KEASYFDPV 353
               S +++ D + I      +G+ +L+    +G+    +S                +   
Sbjct: 1404 RVRSVAFAKDGASIA-TGCDDGRVRLWRTG-DGALTATLSAHTDRVYAVAFGPGLDWLAS 1461

Query: 354  WSPQGDLIAFT---------------------------KFSGEKFAIGVMKKDGSQER-- 384
             S  G  + +                              +G+   I +   +       
Sbjct: 1462 ASWDGTAVVWRDGAARHVLRAHTGKLWTAAVHPTLPLLATAGDDRVIRLWDPETGTRVAE 1521

Query: 385  LLVEDSNLQAPTWSPSGRSLI 405
            L      + + ++SP G  L 
Sbjct: 1522 LTGHSGRVCSLSFSPDGTRLA 1542



 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 34/101 (33%), Gaps = 6/101 (5%)

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             V+ RDGA  R++  +    L+     P    +A       D   + L D         +
Sbjct: 1468 AVVWRDGA-ARHVLRAHTGKLWTAAVHPTLPLLA----TAGDDRVIRLWDPETGTRVAEL 1522

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                  + +  FS +G R   S   D  + +  V  +  A 
Sbjct: 1523 TGHSGRVCSLSFSPDGTRLA-SGGDDGTVRLRRVRARPGAV 1562


>gi|147902750|ref|NP_001086974.1| WD repeat domain 5 [Xenopus laevis]
 gi|50416345|gb|AAH77844.1| Wdr5-prov protein [Xenopus laevis]
          Length = 334

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DISSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 148 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 202

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|198465358|ref|XP_001353600.2| GA10144 [Drosophila pseudoobscura pseudoobscura]
 gi|198150124|gb|EAL31113.2| GA10144 [Drosophila pseudoobscura pseudoobscura]
          Length = 413

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 78/242 (32%), Gaps = 54/242 (22%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  + + RFSP   ++A ++ D      V L + +      R G+  S +    +S
Sbjct: 14  FTGHSGSITQLRFSPEGSQIATSSLDG----SVILWNLKQAARCIRFGSHSSAVYGVAWS 69

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISAS--------------- 308
             G     S   D ++ I+   ++  + E + ++     I+   +               
Sbjct: 70  PKGNLVA-SAGHDRSVKIWEPKVRGVSGEFVAHSKPVRSIDFDPTGQMMLTASDDKSVKI 128

Query: 309 -----------------------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                                  +SP+   I   SD    + L +   N  +  R   ++
Sbjct: 129 WRVAKRQFVSSFSQQTNWVRAAKFSPNGKMIATVSD---DKSLRIYDVNTGECTRTFTEE 185

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRS 403
             +     W P G+++A          I +    GSQ   L  V  + +    + PSG  
Sbjct: 186 RGAPRQVAWHPWGNMVAVALGCN---RIKIFDVGGSQLLQLYVVHSAPVNDVAFHPSGNF 242

Query: 404 LI 405
           L+
Sbjct: 243 LL 244



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 65/199 (32%), Gaps = 19/199 (9%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +        I   RFS  G +   +   D ++ ++++   +    R  +        ++S
Sbjct: 12  RHFTGHSGSITQLRFSPEGSQIA-TSSLDGSVILWNLKQAARCI-RFGSHSSAVYGVAWS 69

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P  + +   +  +   +++  +  G   + ++  K        + P G  +  T    + 
Sbjct: 70  PKGNLVA-SAGHDRSVKIWEPKVRGVSGEFVAHSKP--VRSIDFDPTGQ-MMLTASDDKS 125

Query: 371 FAIGVMKKDGSQERLLVEDSN-----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             I  +      +R  V   +     ++A  +SP+G+ +        D   ++Y ++   
Sbjct: 126 VKIWRV-----AKRQFVSSFSQQTNWVRAAKFSPNGKMIATVSD---DKSLRIYDVNTGE 177

Query: 426 RNETLINTPAYASDPQWVG 444
              T            W  
Sbjct: 178 CTRTFTEERGAPRQVAWHP 196


>gi|195173067|ref|XP_002027316.1| GL15696 [Drosophila persimilis]
 gi|194113159|gb|EDW35202.1| GL15696 [Drosophila persimilis]
          Length = 413

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 78/242 (32%), Gaps = 54/242 (22%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  + + RFSP   ++A ++ D      V L + +      R G+  S +    +S
Sbjct: 14  FTGHSGSITQLRFSPEGSQIATSSLDG----SVILWNLKQAARCIRFGSHSSAVYGVAWS 69

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISAS--------------- 308
             G     S   D ++ I+   ++  + E + ++     I+   +               
Sbjct: 70  PKGNLVA-SAGHDRSVKIWEPKVRGVSGEFVAHSKPVRSIDFDPTGQMMLTASDDKSVKI 128

Query: 309 -----------------------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                                  +SP+   I   SD    + L +   N  +  R   ++
Sbjct: 129 WRVAKRQFISSFSQQTNWVRAAKFSPNGKMIATVSD---DKSLRIYDVNTGECTRTFTEE 185

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRS 403
             +     W P G+++A          I +    GSQ   L  V  + +    + PSG  
Sbjct: 186 RGAPRQVAWHPWGNMVAVALGCN---RIKIFDVGGSQLLQLYVVHSAPVNDVAFHPSGNF 242

Query: 404 LI 405
           L+
Sbjct: 243 LL 244



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 24/199 (12%), Positives = 65/199 (32%), Gaps = 19/199 (9%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +        I   RFS  G +   +   D ++ ++++   +    R  +        ++S
Sbjct: 12  RHFTGHSGSITQLRFSPEGSQIA-TSSLDGSVILWNLKQAARCI-RFGSHSSAVYGVAWS 69

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P  + +   +  +   +++  +  G   + ++  K        + P G  +  T    + 
Sbjct: 70  PKGNLVA-SAGHDRSVKIWEPKVRGVSGEFVAHSKP--VRSIDFDPTGQ-MMLTASDDKS 125

Query: 371 FAIGVMKKDGSQERLLVEDSN-----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             I  +      +R  +   +     ++A  +SP+G+ +        D   ++Y ++   
Sbjct: 126 VKIWRV-----AKRQFISSFSQQTNWVRAAKFSPNGKMIATVSD---DKSLRIYDVNTGE 177

Query: 426 RNETLINTPAYASDPQWVG 444
              T            W  
Sbjct: 178 CTRTFTEERGAPRQVAWHP 196


>gi|118393768|ref|XP_001029292.1| conserved hypothetical protein [Tetrahymena thermophila]
 gi|89283463|gb|EAR81629.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
          Length = 1267

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 70/223 (31%), Gaps = 17/223 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I+ +   +++I+    FS + +   Y     ED     L           I    + I +
Sbjct: 590 IKTIDEGQNKIVNSIVFSEDGK---YFAMGSEDNTCKILNVENNFEYINTIQGHTNSISS 646

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVF 318
             FS +GK    +   D    I+ V        ++ +T+  +       ++SPDS  +  
Sbjct: 647 VAFSPDGKYLA-TGSYDNTCRIWIV----QNELQMIDTVLEHTEMISSVAFSPDSKYLAT 701

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S         +   N     +   +  +      +SP    +A   +      I   + 
Sbjct: 702 GSL---DNTCKIWDLNKLQHIQTIGEHTSGISQVAFSPDNKYLATVYYDNT-CKIWNAEN 757

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +  +    ++        +S  G  L  S          +++I
Sbjct: 758 E-FKLINTIQTGLTCQVAFSADGNYLATSAFDHRIFILNIWNI 799



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 87/246 (35%), Gaps = 17/246 (6%)

Query: 181 SESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           S+ + +G + N+  + D +   +I+ +      I     FSP+ + +A   YD  +  ++
Sbjct: 696 SKYLATGSLDNTCKIWDLNKLQHIQTIGEHTSGISQV-AFSPDNKYLATVYYD--NTCKI 752

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERL 297
           +  +               +     FS++G     S        +   ++++      ++
Sbjct: 753 WNAENEFKLINTIQT---GLTCQVAFSADGNYLATSAFDHRIFILNIWNIKNGFEHLNKI 809

Query: 298 -TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWS 355
            T+     IS ++S D     F +   G     +       ++ I+            +S
Sbjct: 810 QTDHTNQIISLAFSADGK---FLASGSGDSTCQIWNVENGFEQVITIKGHTDRISSIHFS 866

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P    +A   F        V  K     +++   +++ +  +S  G+ L    K   D  
Sbjct: 867 PDSKYLATGSFDNTCQIWNVEDKFQLLNKIVGHKNSIFSIAFSVDGKYLATGSK---DKT 923

Query: 416 SKLYSI 421
            KL+++
Sbjct: 924 CKLWNV 929



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 82/217 (37%), Gaps = 29/217 (13%)

Query: 218 RFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FS +   +A + +D    IL ++ +    +   K   +  + I++  FS++GK    S 
Sbjct: 774 AFSADGNYLATSAFDHRIFILNIWNIKNGFEHLNKIQTDHTNQIISLAFSADGKFLA-SG 832

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSN 334
             D    I+  ++++   + +T     +   S  +SPDS  +   S  +   Q++ ++  
Sbjct: 833 SGDSTCQIW--NVENGFEQVITIKGHTDRISSIHFSPDSKYLATGSF-DNTCQIWNVEDK 889

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------KFAI--GVMKKDGSQER 384
                +I    + S F   +S  G  +A                F +  G+   D +   
Sbjct: 890 FQLLNKIV-GHKNSIFSIAFSVDGKYLATGSKDKTCKLWNVEYGFELINGMNDNDYNN-- 946

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                  +Q+  +S   + L     +  D   K++++
Sbjct: 947 ------QIQSVCFSADNKYLA---TRQRDNTCKIWNL 974



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 78/226 (34%), Gaps = 21/226 (9%)

Query: 188 IIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
             K  + + +  D   I+ +  +   +     F+ + + +A +           +     
Sbjct: 488 SQKKEINIYNLSDLQIIKSIKNNHSDLSVS-SFTSDGKYLAISF----SAETCQIWSAEN 542

Query: 247 DRAPKRIGN-FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLF- 302
                +  N  +S I +  FSSNGK    +  KD+     +V+       +L  T     
Sbjct: 543 GFEVIKTTNEHQSSIWSVAFSSNGKYLA-TSSKDKTCIFQNVE----KEFQLIKTIDEGQ 597

Query: 303 --INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I  S  +S D       S+ +   ++  +++N      I Q    S     +SP G  
Sbjct: 598 NKIVNSIVFSEDGKYFAMGSE-DNTCKILNVENNFEYINTI-QGHTNSISSVAFSPDGKY 655

Query: 361 IAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLI 405
           +A   +      I +++ +      +L     + +  +SP  + L 
Sbjct: 656 LATGSYDNT-CRIWIVQNELQMIDTVLEHTEMISSVAFSPDSKYLA 700


>gi|37694423|gb|AAQ99142.1| prolyl oligopeptidase [Flavobacterium columnare]
          Length = 649

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 54/185 (29%), Gaps = 16/185 (8%)

Query: 219 FSPNQQKVAYA-------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +SP+ + + Y         Y       +Y  +    +      N       P FS NG  
Sbjct: 193 WSPDSKNIIYVCKKKTGTAYATSTNTNLYQYNIETKQTVNLTPNNLGYDTHPDFSPNGDL 252

Query: 272 ALISVQKDE--AMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQL 328
             + +++D   A     +         LT N      S  +S D  ++ F +  +G +QL
Sbjct: 253 TWLQMKQDGYEADKNDIIVKHKGIEINLTANWDGTVESFKWSKDGKKVYFIAPIDGTKQL 312

Query: 329 YVMQSNGS-----DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           + +   G        K+I+            +P   ++           I          
Sbjct: 313 FEVNFPGLTKIAIGVKQITNGDFDVTQIIDSTPD-QILLMRNDISHASEIYSYHLKNKSW 371

Query: 384 RLLVE 388
             +  
Sbjct: 372 NQITH 376



 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 58/194 (29%), Gaps = 20/194 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG + R+    RD              V +      ++     +D              
Sbjct: 135 YDGLDYRHWDTWRDGTYNH---------VFFGGVPAPNVRLAPPIDIMEGEPYDAPQKPF 185

Query: 258 SMILAPRFSSNGKRALI--------SVQKDEAMDIYSVDLQSNATERLT-NTLFINISAS 308
                  +S + K  +         +       ++Y  ++++  T  LT N L  +    
Sbjct: 186 GGDEDYIWSPDSKNIIYVCKKKTGTAYATSTNTNLYQYNIETKQTVNLTPNNLGYDTHPD 245

Query: 309 YSPDSSQIVFESDREGKEQLY--VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +SP+      +  ++G E     ++  +   +  ++ + + +     WS  G  + F   
Sbjct: 246 FSPNGDLTWLQMKQDGYEADKNDIIVKHKGIEINLTANWDGTVESFKWSKDGKKVYFIAP 305

Query: 367 SGEKFAIGVMKKDG 380
                 +  +   G
Sbjct: 306 IDGTKQLFEVNFPG 319



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 48/137 (35%), Gaps = 16/137 (11%)

Query: 309 YSPDSSQIVFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +SPDS  I++                 LY           ++ +       P +SP GDL
Sbjct: 193 WSPDSKNIIYVCKKKTGTAYATSTNTNLYQYNIETKQTVNLTPNNLGYDTHPDFSPNGDL 252

Query: 361 IAFTKFSGE----KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                        K  I ++K  G +  L    D  +++  WS  G+ + F    DG   
Sbjct: 253 TWLQMKQDGYEADKNDI-IVKHKGIEINLTANWDGTVESFKWSKDGKKVYFIAPIDGTK- 310

Query: 416 SKLYSIDLNGRNETLIN 432
            +L+ ++  G  +  I 
Sbjct: 311 -QLFEVNFPGLTKIAIG 326



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 60/185 (32%), Gaps = 19/185 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATY--DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           LTP+       P FSPN   + +     D  +  +  ++            N+   + + 
Sbjct: 233 LTPNNLGYDTHPDFSPNGD-LTWLQMKQDGYEADKNDIIVKHKGIEINLTANWDGTVESF 291

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-----NATERLTNTLF-----INISASYSPDS 313
           ++S +GK+       D    ++ V+           +++TN  F     I+ +       
Sbjct: 292 KWSKDGKKVYFIAPIDGTKQLFEVNFPGLTKIAIGVKQITNGDFDVTQIIDSTP-----D 346

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             ++  +D     ++Y          +I+      Y +            T   G+K  +
Sbjct: 347 QILLMRNDISHASEIYSYHLKNKSWNQITHVNTEIYNNLNLCKTERR-YVTTTDGKKMLV 405

Query: 374 GVMKK 378
            V+  
Sbjct: 406 WVILP 410


>gi|326480565|gb|EGE04575.1| NWD2 [Trichophyton equinum CBS 127.97]
          Length = 1668

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 81/259 (31%), Gaps = 45/259 (17%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            PS+ +    P FS +   +   +     +    + DT        + N    +    FS 
Sbjct: 953  PSQARQFISPAFSNDGTLITSISRPPRQVKSFRVWDTTTGA----LLNTDESLRDADFSP 1008

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFIN--ISASYSPDSSQIVFESDRE 323
            + ++ ++SV     + I   D  +    R+  T     +   S ++SPD   +V      
Sbjct: 1009 S-EKLVVSVNCSNTVKIS--DAVTGTVIRVLETTGHGNSEICSVAFSPDGKLLV---VWA 1062

Query: 324  GKEQLYVMQSNGSDQKRI---------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             +  + +         R          + D         +S    LI      G +    
Sbjct: 1063 AQMLVQIWDVESGTMLRTLERCHCPPSTGDSFDMLSHLAFSSDNGLIG-ASIMGARPETW 1121

Query: 375  VMK-----KDGSQERLLVEDSNLQAPTWSPSGRSLIF-----SRKKDGDTGSKLYSID-- 422
             M       DGS    L         T+SP  + + F     +R  D    S LY+ID  
Sbjct: 1122 SMTCIWNAADGSVVYQL---KGCYTYTFSPDSKLIAFRIAGATRILDAGKRSVLYTIDAC 1178

Query: 423  ------LNGRNETLINTPA 435
                  L+G+   +   P 
Sbjct: 1179 IDMAFSLDGKLAVVQAEPG 1197



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 48/348 (13%), Positives = 107/348 (30%), Gaps = 66/348 (18%)

Query: 111  LVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            L   +         ++ FR+          I  K   +     R +      DI   +  
Sbjct: 1189 LAVVQAEPGSPGATQISFRIAATGKSTGVTIYLKGSSTPDVELRHM------DIDHMVFS 1242

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              G          + + +      + + D     +  L  + + +     FSP+   +A 
Sbjct: 1243 PDG----------KLLATYNWACYMRLWDVASGELVELFKNCNSV----SFSPDGTVMA- 1287

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGN----------------------FRSMILAPRFS 266
             +   ++++R++ + T        + N                      +   I A   S
Sbjct: 1288 -SGSPDNLIRIWDVPTPTSGHFIPVINKAKDAIKRLWTAQASEEKIASAYGGNIFALVLS 1346

Query: 267  SNGKRAL---ISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDR 322
             +GK A      +    A  +   D+ S    + +    +IN +  + P   ++V  +D 
Sbjct: 1347 PDGKLAASGGCGLDPTGAPVVIW-DVASGVPLQQSKLNYYINKNILFWPSDKRLV-SADA 1404

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------KFSGEKFAIGVM 376
             G  +L    +   ++  +  +      +    P   L+         +   E++ I   
Sbjct: 1405 CG--RLVSWDAPSLEELPMIDESYRPILNMAILPDKGLVLVALDIYPPELMHEEYHIYDF 1462

Query: 377  KKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G   R L    + ++A  +S  GR +     +      K++S D 
Sbjct: 1463 NT-GKFLRELNGHHAKVEALAFSSDGRLIATGSSR----AVKVWSTDT 1505


>gi|313232605|emb|CBY19275.1| unnamed protein product [Oikopleura dioica]
          Length = 1130

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 73/228 (32%), Gaps = 24/228 (10%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D    + V++M              ++ +++ ++S  G+R  I+   D  + + SVD
Sbjct: 89  TSADSRGRIIVWVMYDGRWYEEMINYRPKTTVMSMQWSPEGERIAIAYD-DGQVIVGSVD 147

Query: 289 LQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
                  +      I  S     ++SPD  +++   +     ++ V  +NG    ++   
Sbjct: 148 G------QRVWGKSIGDSPVTHVNWSPDGDKLLLALN---GTEVMVHDANGDQLFKMRSI 198

Query: 345 KEA-SYFDPVWSPQ-------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                    VW                  F   +  +   + D   E +      ++   
Sbjct: 199 PPGQRIHSIVWYADEIHFLAASKRTLVITFVSGRALLLENESDSKPEMIETGLEEIKDVK 258

Query: 397 WSPSGRSLIFSRKKDGDTGSKLY--SIDLNGRNETLINTPAYASDPQW 442
           +SP G  + F+  K  +     +    +  G +   +  P       W
Sbjct: 259 FSPDGLYIAFAGNKGNNPKLPYWCELFNTAGAHLRSLKLPGPVEAISW 306



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 83/233 (35%), Gaps = 23/233 (9%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDI 236
           ++   +      +  + VM  DG     +   R +      ++SP  +++A A YDD  +
Sbjct: 84  VYRKLTSADSRGRIIVWVM-YDGRWYEEMINYRPKTTVMSMQWSPEGERIAIA-YDDGQV 141

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           +   +   R+    K IG+    +    +S +G + L+++      ++   D   +   +
Sbjct: 142 IVGSVDGQRVWG--KSIGDSP--VTHVNWSPDGDKLLLALN---GTEVMVHDANGDQLFK 194

Query: 297 LTNTLFINI--SASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQDKEAS 348
           + +        S  +  D    +  S R           L +   + S  + I    E  
Sbjct: 195 MRSIPPGQRIHSIVWYADEIHFLAASKRTLVITFVSGRALLLENESDSKPEMIETGLE-E 253

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAI----GVMKKDGSQERLLVEDSNLQAPTW 397
             D  +SP G  IAF    G    +     +    G+  R L     ++A +W
Sbjct: 254 IKDVKFSPDGLYIAFAGNKGNNPKLPYWCELFNTAGAHLRSLKLPGPVEAISW 306


>gi|313219961|emb|CBY43662.1| unnamed protein product [Oikopleura dioica]
          Length = 1130

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 73/228 (32%), Gaps = 24/228 (10%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D    + V++M              ++ +++ ++S  G+R  I+   D  + + SVD
Sbjct: 89  TSADSRGRIIVWVMYDGRWYEEMINYRPKTTVMSMQWSPEGERIAIAYD-DGQVIVGSVD 147

Query: 289 LQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
                  +      I  S     ++SPD  +++   +     ++ V  +NG    ++   
Sbjct: 148 G------QRVWGKSIGDSPVTHVNWSPDGDKLLLALN---GTEVMVHDANGDQLFKMRSI 198

Query: 345 KEA-SYFDPVWSPQ-------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                    VW                  F   +  +   + D   E +      ++   
Sbjct: 199 PPGQRIHSIVWYADEIHFLAASKRTLVITFVSGRALLLENESDSKPEMIETGLEEIKDVK 258

Query: 397 WSPSGRSLIFSRKKDGDTGSKLY--SIDLNGRNETLINTPAYASDPQW 442
           +SP G  + F+  K  +     +    +  G +   +  P       W
Sbjct: 259 FSPDGLYIAFAGNKGNNPKLPYWCELFNTAGAHLRSLKLPGPVEAISW 306



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 83/233 (35%), Gaps = 23/233 (9%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDI 236
           ++   +      +  + VM  DG     +   R +      ++SP  +++A A YDD  +
Sbjct: 84  VYRKLTSADSRGRIIVWVM-YDGRWYEEMINYRPKTTVMSMQWSPEGERIAIA-YDDGQV 141

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           +   +   R+    K IG+    +    +S +G + L+++      ++   D   +   +
Sbjct: 142 IVGSVDGQRVWG--KSIGDSP--VTHVNWSPDGDKLLLALN---GTEVMVHDANGDQLFK 194

Query: 297 LTNTLFINI--SASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQDKEAS 348
           + +        S  +  D    +  S R           L +   + S  + I    E  
Sbjct: 195 MRSIPPGQRIHSIVWYADEIHFLAASKRTLVITFVSGRALLLENESDSKPEMIETGLE-E 253

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAI----GVMKKDGSQERLLVEDSNLQAPTW 397
             D  +SP G  IAF    G    +     +    G+  R L     ++A +W
Sbjct: 254 IKDVKFSPDGLYIAFAGNKGNNPKLPYWCELFNTAGAHLRSLKLPGPVEAISW 306


>gi|256389713|ref|YP_003111277.1| cell wall binding repeat 2-containing protein [Catenulispora
           acidiphila DSM 44928]
 gi|256355939|gb|ACU69436.1| putative cell wall binding repeat 2-containing protein
           [Catenulispora acidiphila DSM 44928]
          Length = 656

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 77/220 (35%), Gaps = 33/220 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR------SMILAPRFSSNGKR 271
            +SP+  ++A        +LR+   D     +   + ++       + I +  + ++G+ 
Sbjct: 87  AWSPDGSRIACLEAYSAGVLRIRNPDDNRVVSAGSVTDYAKPDSPLAKISSLTWFNHGRE 146

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFI-----------NISASYSPDSSQIVFES 320
            +++    +   + SV +  +      N+              +++A+     + + F  
Sbjct: 147 VVLA----QNGSLISVRVDGSQPRNPDNSYAPTAMLPGQTGITDVTAN--AAGTVLAFTQ 200

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEK---FAIGVM 376
                  + V  +       +    + SY      SP G  +A+  ++  +     I + 
Sbjct: 201 GTSTGASVIVYDTTKPAASALRPLAQVSYASQLALSPDGRYLAYVPYTPGQNAPSQIWLY 260

Query: 377 KKDG----SQERLLVEDSNLQA--PTWSPSGRSLIFSRKK 410
                   S  R +  DS + A  PTW+P G  L F+   
Sbjct: 261 DLKSPASASNPRQVTSDSAVSASNPTWAPDGTRLAFTATS 300



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 68/206 (33%), Gaps = 28/206 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINI------SASYSPDSS 314
            +S +G R    ++   A  +   +   N       +T+    +       S ++     
Sbjct: 87  AWSPDGSRIA-CLEAYSAGVLRIRNPDDNRVVSAGSVTDYAKPDSPLAKISSLTWFNHGR 145

Query: 315 QIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++V        S R    Q      + S         +    D   +  G ++AFT+ + 
Sbjct: 146 EVVLAQNGSLISVRVDGSQPR--NPDNSYAPTAMLPGQTGITDVTANAAGTVLAFTQGTS 203

Query: 369 EKFAIGVMK---KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDL- 423
              ++ V        S  R L + S       SP GR L +     G    S+++  DL 
Sbjct: 204 TGASVIVYDTTKPAASALRPLAQVSYASQLALSPDGRYLAYVPYTPGQNAPSQIWLYDLK 263

Query: 424 ---NGRNETLINTPA--YASDPQWVG 444
              +  N   + + +   AS+P W  
Sbjct: 264 SPASASNPRQVTSDSAVSASNPTWAP 289



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 50/143 (34%), Gaps = 17/143 (11%)

Query: 269 GKRALISVQKDEAMDIYSVD---LQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           G     +        +   D     ++A   L   +      + SPD   + +     G+
Sbjct: 193 GTVLAFTQGTSTGASVIVYDTTKPAASALRPLAQ-VSYASQLALSPDGRYLAYVPYTPGQ 251

Query: 326 E---QLYVMQ----SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFA 372
               Q+++      ++ S+ ++++ D   S  +P W+P G  +AFT  S       + F 
Sbjct: 252 NAPSQIWLYDLKSPASASNPRQVTSDSAVSASNPTWAPDGTRLAFTATSASLAHSVKSFP 311

Query: 373 IGVMKKDGSQERLLVEDSNLQAP 395
           +        +   L   S L  P
Sbjct: 312 VADPSSQRVEVPTLTYQSFLWRP 334


>gi|224076731|ref|XP_002196976.1| PREDICTED: WD repeat and SOCS box-containing 1 [Taeniopygia
           guttata]
          Length = 426

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 65/180 (36%), Gaps = 15/180 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 156 RIKIWDAYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 215

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                     ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 216 RGHPNWVYGCAFSPDSSILC---SVGASKAVFLWDMDKYSMLRKLEGHHNDVVACEFSPD 272

Query: 358 GDLIAFTKFSGEKF----AIGVMKKD-GSQERLLV-------EDSNLQAPTWSPSGRSLI 405
           G L+A   +    +     IGV+ ++ G               D  +++  +S  G  + 
Sbjct: 273 GALLATASYDTRVYVWDPHIGVILREFGHLFPPPTPIFAGGANDRWVRSVCFSHDGLHVA 332



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 61/199 (30%), Gaps = 21/199 (10%)

Query: 185 VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VS     +L V D +D  N+  +       ++   FSP+   +            V+L D
Sbjct: 192 VSASRDKTLRVWDLKDDGNMMKVLRGHPNWVYGCAFSPDSSILCSV----GASKAVFLWD 247

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----AMDIYSVDLQSN----ATE 295
                  +++    + ++A  FS +G     +            I  +  +         
Sbjct: 248 MDKYSMLRKLEGHHNDVVACEFSPDGALLATASYDTRVYVWDPHIGVILREFGHLFPPPT 307

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S  +S D   +   +D    + +   + +     +++          
Sbjct: 308 PIFAGGANDRWVRSVCFSHDGLHVASLAD---DKMVRFWRIDEEYPVQVAPLNNG--LCC 362

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 363 TFSTDGGVLAAGTQDGSLY 381



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 4/99 (4%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +  +          D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 154 NGRIKIWDAYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 213

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +L    N      +SP   S++ S          L+ +D
Sbjct: 214 VLRGHPNWVYGCAFSPDS-SILCS--VGASKAVFLWDMD 249


>gi|212528954|ref|XP_002144634.1| WD-repeat protein, putative [Penicillium marneffei ATCC 18224]
 gi|210074032|gb|EEA28119.1| WD-repeat protein, putative [Penicillium marneffei ATCC 18224]
          Length = 1366

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 97/247 (39%), Gaps = 19/247 (7%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                S+C+ D +             +      S N ++  Y    DE+++R++  +  + 
Sbjct: 1032 YGDKSICLWDTETGMKMSAITDYFNLAEMFSLSANGKQFIYLV--DEEVIRIWDTEKGLG 1089

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            R  +R+ +    +L+ + S +GK   +  + ++A++I+ V           N L    S 
Sbjct: 1090 RHSQRLKSD--TVLSLQLSPDGKLFAVDYE-NKAVEIWDVKTFKKRLVLRENKLSRRRSK 1146

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTK 365
            ++SPD S ++     +G    +   S G+   R        Y  P   +SP G  +AF  
Sbjct: 1147 AFSPDGSLLL---IWDGYYMNFWNTSTGTCDIR-WDGLNDEYVSPVAAFSPNGRKVAFAL 1202

Query: 366  FSGEKFAIG---VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK-----DGDTGSK 417
               +   +      + +   E L      L   ++SP G+   ++ +      D +TG K
Sbjct: 1203 RDSQTIQLWNVITQELENKFEELDQSIGLLTMLSFSPDGKYFAYNTETKIHLCDAETGVK 1262

Query: 418  LYSIDLN 424
            +  + ++
Sbjct: 1263 IVRVPID 1269



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 22/128 (17%)

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            C +  DG N  Y++P          FSPN +KVA+A  D + I    ++   ++   + +
Sbjct: 1173 CDIRWDGLNDEYVSP-------VAAFSPNGRKVAFALRDSQTIQLWNVITQELENKFEEL 1225

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPD 312
                 ++    FS +GK        +    I+  D ++     R+     I+   S    
Sbjct: 1226 DQSIGLLTMLSFSPDGKYFAY----NTETKIHLCDAETGVKIVRVP----IDTEVS---- 1273

Query: 313  SSQIVFES 320
              ++ F S
Sbjct: 1274 --ELAFSS 1279



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 72/206 (34%), Gaps = 20/206 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR-ALISVQK 278
           SPN + VA A+ D   ++R++   T  +R       F   +    FS++G++   I   K
Sbjct: 679 SPNGRLVATASAD--GVIRIWDAVTGTERHAFD-QYFAHSVKDLAFSADGRQFVAICEYK 735

Query: 279 DEAMDIYSV-DLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D +       D  +      L          ++S D       +       + ++ S   
Sbjct: 736 DVSRSALRFWDAMTGFELRSLIREEATIGCIAFSADGRTFAIGTTEG---TISILDSTTH 792

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIGVMKKDGSQERL 385
            Q R       +    V+SP G  +A +  +   F            I + +    +E  
Sbjct: 793 AQHRDLHCDAEAVVRIVFSPNGQYLASSSVTHTSFLRMTKRYNSKATIRLWEIATGKELC 852

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKD 411
           ++++S  ++ T+S     L +     
Sbjct: 853 VLKNSENESMTFSSDSILLAYKTDTS 878



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 67/204 (32%), Gaps = 31/204 (15%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-------- 238
           G  + ++ ++D              + +    FSPN Q +A ++      LR        
Sbjct: 778 GTTEGTISILDSTTHAQHRDLHCDAEAVVRIVFSPNGQYLASSSVTHTSFLRMTKRYNSK 837

Query: 239 --VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
             + L +    +    + N  S   +  FSS+         K +   I   D+++ + + 
Sbjct: 838 ATIRLWEIATGKELCVLKN--SENESMTFSSDSILLAY---KTDTSRICLWDIKNASEKT 892

Query: 296 ----RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                LT+      S S+  +          EG+  ++         +R     +  Y  
Sbjct: 893 TYKCELTSL----TSLSFLHNGELRATAYSVEGRLYIWTPDKGSRALRR-----QPDYMQ 943

Query: 352 PVWS-PQGDLIAFTKFSGEKFAIG 374
            + S P G L+  T + G    I 
Sbjct: 944 DMVSFPDGRLVV-TSYEGRSVHIW 966


>gi|256821941|ref|YP_003145904.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Kangiella koreensis DSM 16069]
 gi|256795480|gb|ACV26136.1| peptidase S9B dipeptidylpeptidase IV domain protein [Kangiella
           koreensis DSM 16069]
          Length = 763

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 67/199 (33%), Gaps = 54/199 (27%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--------------- 264
           SP+ ++V +     E+  R+ L +  +     R+    S  L+P                
Sbjct: 68  SPDGKRVTFLKGKVEEQERLDLWEYNLADGESRLL-VDSNDLSPGEEQLSDEEKARRERM 126

Query: 265 -----------FSSNGKRALISVQKDEAMDIYSVDLQS---NATERLTNTLFINISASYS 310
                      +  + +  L  +  D    I+  DL      AT++LT+T         S
Sbjct: 127 RLFAKGIIDYYWGDDSQTLLFPLAGD----IFVYDLNKAPKKATKQLTDTEAYETDIKLS 182

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------W 354
           PD   + F  D++    ++ ++     + +++ D E +  + +                W
Sbjct: 183 PDGRFVSFIRDQD----IFKVEIATGKETQLTFDGEGTIKNGMAEFVAQEEMGRLTGYWW 238

Query: 355 SPQGDLIAFTKFSGEKFAI 373
           SP    IA+ +       I
Sbjct: 239 SPDSKKIAYLQIDESPVNI 257



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 64/197 (32%), Gaps = 61/197 (30%)

Query: 260 ILAPRFSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFINISA--------- 307
           + + + S +GKR       V++ E +D++  +L    +  L +    ++S          
Sbjct: 62  VSSVKLSPDGKRVTFLKGKVEEQERLDLWEYNLADGESRLLVD--SNDLSPGEEQLSDEE 119

Query: 308 -----------------SYSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEA 347
                             +  DS  ++F         ++V   N +     K+++ D EA
Sbjct: 120 KARRERMRLFAKGIIDYYWGDDSQTLLFPL----AGDIFVYDLNKAPKKATKQLT-DTEA 174

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS----------------- 390
              D   SP G  ++F +       I  ++    +E  L  D                  
Sbjct: 175 YETDIKLSPDGRFVSFIRDQD----IFKVEIATGKETQLTFDGEGTIKNGMAEFVAQEEM 230

Query: 391 -NLQAPTWSPSGRSLIF 406
             L    WSP  + + +
Sbjct: 231 GRLTGYWWSPDSKKIAY 247



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 88/278 (31%), Gaps = 66/278 (23%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +  + Q + +    D   + VY ++    +A K++ +  +     + S +G+       +
Sbjct: 138 WGDDSQTLLFPLAGD---IFVYDLNKAPKKATKQLTDTEAYETDIKLSPDGRFVSFIRDQ 194

Query: 279 DEAMDIYSVDLQSNATERLTNT-----------------LFINISASYSPDSSQIV---- 317
           D    I+ V++ +    +LT                   +       +SPDS +I     
Sbjct: 195 D----IFKVEIATGKETQLTFDGEGTIKNGMAEFVAQEEMGRLTGYWWSPDSKKIAYLQI 250

Query: 318 -----------------FESDREGKE---------QLYVMQSNGSDQKRISQDKEASYFD 351
                            F    +            +L V+    S  + I   KE   + 
Sbjct: 251 DESPVNIEKRYEINAEDFTVFEQRYPSTGTDNVLIKLAVLNLETSKTQWIDTGKETDIYL 310

Query: 352 PV--WSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAP-----TWSPSG 401
           P   W      +++   + ++  + +   D   G  + +L E S+          +    
Sbjct: 311 PRVNWLSDSSQVSYQWQTRDQQTLELRFADISNGQSKTILTETSDTWINLTKDLMFLKDQ 370

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            + +++ ++ G     LY  DL G     +    +  D
Sbjct: 371 AAFVWTSERSGFR--HLYLYDLKGNLIHQLTDGDWVID 406



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 79/219 (36%), Gaps = 27/219 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ +K+AY   D+  +      +   +            +   R+ S G   ++   
Sbjct: 237 WWSPDSKKIAYLQIDESPVNIEKRYEINAEDFT---------VFEQRYPSTGTDNVL--- 284

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDREGKEQLYVMQSN 334
               + +  ++L+++ T+ +      +I     ++  DSSQ+ ++     ++ L +  ++
Sbjct: 285 ----IKLAVLNLETSKTQWIDTGKETDIYLPRVNWLSDSSQVSYQWQTRDQQTLELRFAD 340

Query: 335 GSDQKRISQDKEASYFDPVWSPQ----GDLIAF--TKFSGEKFAIGVMKKDGSQERLLVE 388
            S+ +  +   E S      +       D  AF  T        + +    G+    L +
Sbjct: 341 ISNGQSKTILTETSDTWINLTKDLMFLKDQAAFVWTSERSGFRHLYLYDLKGNLIHQLTD 400

Query: 389 DSNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNG 425
              +    +        + F   K+      LYS+ L+G
Sbjct: 401 GDWVIDKIYGVDEEQGVVYFDANKESPLQQDLYSVALSG 439


>gi|284923772|emb|CBG36870.1| conserved hypothetical protein [Escherichia coli 042]
          Length = 416

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   +  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRNDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 415



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   +D  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRNDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 415



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +      L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RNDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 403


>gi|123442156|ref|YP_001006137.1| oligogalacturonate lyase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|310943021|pdb|3PE7|A Chain A, Oligogalacturonate Lyase In Complex With Manganese
 gi|122089117|emb|CAL11955.1| oligogalacturonate lyase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 388

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 30/275 (10%), Positives = 81/275 (29%), Gaps = 41/275 (14%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V   V +  +     V + D   +  +   R+       + P      +  +        
Sbjct: 116 VVYQVPAEWVGYGTWVANSDCTKLVGIEIRRED------WVPLTDWKKFHEFYFTKPCCR 169

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MDIYSVDLQSNATE 295
            +           I      +  P +   +        +         ++ ++       
Sbjct: 170 LMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMR 229

Query: 296 RL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFD 351
           ++ T+    +     + PD S +V+ S  +G     +Y       + ++++     S+  
Sbjct: 230 KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLM 289

Query: 352 PVWSPQGDLIA-------FTKFSGEKFAI------GVMKK-DGSQERLLVEDSNLQ---- 393
             +   G L+                + I       V    +G+Q R+   D++ +    
Sbjct: 290 SNY--DGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEG 347

Query: 394 -------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   P+++P  + ++F+    G     L ++
Sbjct: 348 DRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382



 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 66/190 (34%), Gaps = 31/190 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
           +S + F        ++   + +++ DG N+R + T +  +      + P+   + Y +Y 
Sbjct: 200 DSTVAFC-HEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYL 258

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR------SMILAPRFSSNGKRALISVQKDEAMDI-- 284
                R            +++ +        S         +G  A + VQ D    I  
Sbjct: 259 KGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEN 318

Query: 285 ----YSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFESDREGKE 326
               Y  ++++    R+      + S               S++PD  QI+F SD  GK 
Sbjct: 319 DPFLYVFNMKNGTQHRVARH---DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKP 375

Query: 327 QLYVMQSNGS 336
            LY+     S
Sbjct: 376 ALYLATLPES 385



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 72/213 (33%), Gaps = 28/213 (13%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           P  +   R+      F+ +G + L     D   + Y +DL +    +LT     N    +
Sbjct: 28  PPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGF 87

Query: 310 -SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-----QDKEASYFDPV---------- 353
            SPD   + +  D      L  +     ++  +           ++              
Sbjct: 88  LSPDDDALFYVKD---GRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEI 144

Query: 354 ----WSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSP-SGRSLI 405
               W P  D   F +F   K    +M+ D   G    +L E+  L  P + P    ++ 
Sbjct: 145 RREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVA 204

Query: 406 FSRKKDGDT-GSKLYSIDLNGRNETLINTPAYA 437
           F  +   D   ++++ I+ +G N   + T A  
Sbjct: 205 FCHEGPHDLVDARMWLINEDGTNMRKVKTHAEG 237



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/315 (15%), Positives = 96/315 (30%), Gaps = 51/315 (16%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +D         +    +P       H   +  YQ      G   S++LF      +    
Sbjct: 11  FDTYQDASTGAQVTRLTPPDV--TCHR--NYFYQKCFTRDG---SKLLF----GGAFDGP 59

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +  ++D +      LT  R    F    SP+   + Y   D  +++RV L     +   
Sbjct: 60  WNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVK-DGRNLMRVDLATLEENVVY 118

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +    +            G          +   +  ++++      LT+           
Sbjct: 119 QVPAEWVGY---------GTWVA----NSDCTKLVGIEIRREDWVPLTDWK--------- 156

Query: 311 PDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFS 367
               +  F      K   +L  +     +   I Q+ +     P++ P     +AF    
Sbjct: 157 -KFHEFYFT-----KPCCRLMRVDLKTGESTVILQENQW-LGHPIYRPYDDSTVAFCHEG 209

Query: 368 GEKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   + ++ +DG+  R +    E  +     W P G +L++     G     +YS 
Sbjct: 210 PHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSA 269

Query: 422 DLNG-RNETLINTPA 435
           D     N  L + PA
Sbjct: 270 DPETLENRQLTSMPA 284


>gi|332662226|ref|YP_004445014.1| peptidase C14 caspase catalytic subunit p20 [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332331040|gb|AEE48141.1| peptidase C14 caspase catalytic subunit p20 [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 974

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 86/274 (31%), Gaps = 56/274 (20%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDI--LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           +  L+    SP+ + VA   +  ++     +YL D       KR+     ++    +S +
Sbjct: 98  EGALYAGAISPDGRWVALGGWTGKNSEDKNIYLFDVASGEMVKRLSGLPDVVFDIEYSPD 157

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--- 325
           G+    ++  +  +             R ++         Y+ D+  + F  D  G+   
Sbjct: 158 GRYLAATLGSEGLL-----------VWRCSDWTLFKTDEDYAKDAYNLAF--DAWGRLAT 204

Query: 326 ----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 L V +++ + +K+I        F   +SP G  +A          +     D  
Sbjct: 205 VCDDGYLRVYKADFTLEKKIRTTGGKEPFSLAFSPNGQYLALGYSDSPTIQV----LDAR 260

Query: 382 QERLL---------VEDSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRNE 428
              LL           D  L    +S  G+ L     +S  +DG    ++      G+  
Sbjct: 261 SLELLYAPNISAASTIDDRLMIVAFSADGQYLAAGGFYSLFQDGAWWHQVRVWQDAGKGA 320

Query: 429 --------------TLINTPAYA---SDPQWVGF 445
                           +    +    S P W GF
Sbjct: 321 YTDYQAADNSILDIKALPMGGFVFGGSQPDWGGF 354



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 5/77 (6%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMK-KDGSQERLLVEDSNLQAP- 395
           I  + E + +    SP G  +A   ++G+      I +     G   + L    ++    
Sbjct: 93  IGAEDEGALYAGAISPDGRWVALGGWTGKNSEDKNIYLFDVASGEMVKRLSGLPDVVFDI 152

Query: 396 TWSPSGRSLIFSRKKDG 412
            +SP GR L  +   +G
Sbjct: 153 EYSPDGRYLAATLGSEG 169


>gi|255531147|ref|YP_003091519.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Pedobacter heparinus DSM 2366]
 gi|255344131|gb|ACU03457.1| peptidase S9B dipeptidylpeptidase IV domain protein [Pedobacter
           heparinus DSM 2366]
          Length = 721

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 40/288 (13%), Positives = 85/288 (29%), Gaps = 56/288 (19%)

Query: 199 DGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDEDI--------- 236
           DG   +  T     I++                +S N + +A+   D   +         
Sbjct: 165 DGDRKQVTTDGNSDIVYASSVHREEFGISKGTFWSNNGKVLAFYRMDQRMVTDYPIIDWT 224

Query: 237 ----------------------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
                                 + VY  +T+     K        +    +S + K   I
Sbjct: 225 SRPAHNVNIKYPMAGDKSHHVTVGVYHAETKAVVYLKTGEPAEQYLTNIAWSPDDKYVYI 284

Query: 275 SVQKDE--AMDIYSVDLQSNATERLTNTLFIN--ISA-----SYSPDSSQIVFESDREGK 325
           +V       M +   D  +    +       +  +           D S+ +++S+R+G 
Sbjct: 285 AVLNRGQNHMKLNQYDAATGDFVKTLFEEKDDKYVEPLVPMLFLKNDPSKFIWQSNRDGW 344

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQE 383
             LY+    G   K++++          +  +G+ + +     S     + V+     Q 
Sbjct: 345 NHLYLYDLKGRVVKQLTRGAWEVLEVKGFDAKGERLFYVSTEESPVTRNLYVLNVKSGQS 404

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           R L     +     S SG ++I       D    +  ++  G    L+
Sbjct: 405 RRLTSAFAVHNTQVSISGNTVI-DVYSTPDVPRVIQLVETPGSKAKLL 451


>gi|58332678|ref|NP_001011411.1| WD repeat-containing protein 5 [Xenopus (Silurana) tropicalis]
 gi|148231305|ref|NP_001087623.1| WD repeat domain 5 [Xenopus laevis]
 gi|82232080|sp|Q5M786|WDR5_XENTR RecName: Full=WD repeat-containing protein 5
 gi|51703446|gb|AAH81008.1| Wdr5-b-prov protein [Xenopus laevis]
 gi|56789834|gb|AAH88786.1| WD repeat domain 5 [Xenopus (Silurana) tropicalis]
 gi|89272855|emb|CAJ82141.1| WD repeat domain 5 [Xenopus (Silurana) tropicalis]
          Length = 334

 Score = 60.4 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 148 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 202

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|327295655|ref|XP_003232522.1| chromosome segregation protein [Trichophyton rubrum CBS 118892]
 gi|326464833|gb|EGD90286.1| chromosome segregation protein [Trichophyton rubrum CBS 118892]
          Length = 851

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 75/213 (35%), Gaps = 23/213 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S +++ +A A+    D L V +++       K + +    +    F  +G+   +S  
Sbjct: 104 AISKDEEWIAVAS----DELTVKIVNINDITEVKYLRDQTKGVKHVTFDPSGRFVTVS-C 158

Query: 278 KDEAMDIYS--------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            D  + IYS        +        +L        SA + PD +   F +    ++   
Sbjct: 159 ADGIIYIYSFTETEPTLLHKLDGVIRQLETDNEATSSAVWHPDGT--AFAAVEATRDITV 216

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +   + + Q++ S           WSP G L+A    +G    I + +    +     + 
Sbjct: 217 ISSRDWTKQRKFSGGHNGDVTCLAWSPNGALLA---SAGADRKILLWETRTQKVIKTYDI 273

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            N+    W P+   + F+         +L+  D
Sbjct: 274 PNVINFRWHPTQNVVAFTTSDG-----ELFIYD 301


>gi|242014850|ref|XP_002428096.1| WD-repeat protein, putative [Pediculus humanus corporis]
 gi|212512620|gb|EEB15358.1| WD-repeat protein, putative [Pediculus humanus corporis]
          Length = 584

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 82/257 (31%), Gaps = 26/257 (10%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV- 185
           E +LW + + K++  K   SS     ++A  I D   ++ +    +  S I   S S   
Sbjct: 285 ELQLWSLTENKRLSKKPCSSSKI---RLAVDIDDSTVETESKNISEPVSSITLRSHSGRV 341

Query: 186 -------------SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                        S  +  ++   D    + R +    +  ++    SP    VA  ++D
Sbjct: 342 QDLAFIPNNDLLLSVSMDKTMRAWDLKSYSCRAVYRGHNYPIWAIDVSPLGVYVATGSHD 401

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                   L     +   +        +   RF  NG     +   D+++ ++S      
Sbjct: 402 K----TARLWSLERNYPLRIFAGHVQDVDCLRFHPNGSYLA-TGSSDKSVRLWSTS-SGE 455

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L        + S+SP+   +          ++ +     S+     +    +    
Sbjct: 456 LMRVLPGHRGGIYALSFSPNGKLLA---SAGEDRRIKIWDIASSNVITELKGHSGTITSL 512

Query: 353 VWSPQGDLIAFTKFSGE 369
            WSP GD +A   F   
Sbjct: 513 DWSPNGDFLASCSFDNT 529



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 77/217 (35%), Gaps = 15/217 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
              S    + +  F PN   +   + D    +R + + +   RA  R  N+   I A   
Sbjct: 333 TLRSHSGRVQDLAFIPNNDLLLSVSMD--KTMRAWDLKSYSCRAVYRGHNYP--IWAIDV 388

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREG 324
           S  G     +   D+   ++S  L+ N   R+      ++    + P+ S +   S    
Sbjct: 389 SPLGVYVA-TGSHDKTARLWS--LERNYPLRIFAGHVQDVDCLRFHPNGSYLATGSS--- 442

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +  ++  +  R+        +   +SP G L+A +     +  I  +        
Sbjct: 443 DKSVRLWSTSSGELMRVLPGHRGGIYALSFSPNGKLLA-SAGEDRRIKIWDIASSNVITE 501

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           L      + +  WSP+G  L        D   +++++
Sbjct: 502 LKGHSGTITSLDWSPNGDFLA---SCSFDNTCRIWNV 535


>gi|145528433|ref|XP_001450015.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417606|emb|CAK82618.1| unnamed protein product [Paramecium tetraurelia]
          Length = 689

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 65/180 (36%), Gaps = 14/180 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+   +A  +YD+     + L D +  +   ++    S + +  FS
Sbjct: 444 LDGHSSCVNSVNFSPDGTTLASGSYDN----SIRLWDVKTGQQKAKLDGHSSSVNSVNFS 499

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGK 325
            +G     S   D ++ ++  D+++   + +L    +  +S ++SPD + +   S     
Sbjct: 500 PDGTTLA-SGSADYSIRLW--DVKTGQQKAKLDGHSYGILSVNFSPDGTTLASCSY---D 553

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             +          K          +   +SP G+ +A   +      I +     S E L
Sbjct: 554 MSIRQWDVKTGQYKAKLDGHSKEVYSVNFSPDGNRLASDSWDES---IRLWNVITSNEIL 610



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 62/173 (35%), Gaps = 15/173 (8%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYS 310
           ++    S + +  FS +G     S   D ++ ++  D+++   + +L        S ++S
Sbjct: 443 KLDGHSSCVNSVNFSPDGTTLA-SGSYDNSIRLW--DVKTGQQKAKLDGHSSSVNSVNFS 499

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD + +   S       + +       QK              +SP G  +A   +    
Sbjct: 500 PDGTTLASGS---ADYSIRLWDVKTGQQKAKLDGHSYGILSVNFSPDGTTLASCSYD--- 553

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
            +I        Q +  ++  + +  +  +SP G  L        D   +L+++
Sbjct: 554 MSIRQWDVKTGQYKAKLDGHSKEVYSVNFSPDGNRLA---SDSWDESIRLWNV 603



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 53/171 (30%), Gaps = 28/171 (16%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  +Q                 H+    +        G     
Sbjct: 461 TTLASGSYDNSIRLWDVKTGQQKAKLD-----------GHSS--SVNSVNFSPDG----- 502

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG    S+ + D      +         +    FSP+   +A  +YD    
Sbjct: 503 -----TTLASGSADYSIRLWDVKTGQQKAKLDGHSYGILSVNFSPDGTTLASCSYDM--- 554

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             +   D +  +   ++      + +  FS +G R   S   DE++ +++V
Sbjct: 555 -SIRQWDVKTGQYKAKLDGHSKEVYSVNFSPDGNRLA-SDSWDESIRLWNV 603



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 62/157 (39%), Gaps = 11/157 (7%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           ++ SG   NS+ + D      +         +    FSP+   +A  + D      + L 
Sbjct: 462 TLASGSYDNSIRLWDVKTGQQKAKLDGHSSSVNSVNFSPDGTTLASGSAD----YSIRLW 517

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTL 301
           D +  +   ++      IL+  FS +G     S   D ++  +  D+++   + +L    
Sbjct: 518 DVKTGQQKAKLDGHSYGILSVNFSPDGTTLA-SCSYDMSIRQW--DVKTGQYKAKLDGHS 574

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
               S ++SPD +++   SD    E + +     S++
Sbjct: 575 KEVYSVNFSPDGNRLA--SD-SWDESIRLWNVITSNE 608



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 51/139 (36%), Gaps = 13/139 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + +   S       + +       QK       +S     +SP G  +A     
Sbjct: 455 NFSPDGTTLASGSY---DNSIRLWDVKTGQQKAKLDGHSSSVNSVNFSPDGTTLASGSAD 511

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRK----KDGDTGSKLYSI 421
              ++I +      Q++  ++  +    +  +SP G +L         +  D  +  Y  
Sbjct: 512 ---YSIRLWDVKTGQQKAKLDGHSYGILSVNFSPDGTTLASCSYDMSIRQWDVKTGQYKA 568

Query: 422 DLNGRNETLINTPAYASDP 440
            L+G ++ + +   ++ D 
Sbjct: 569 KLDGHSKEVYSVN-FSPDG 586


>gi|262197262|ref|YP_003268471.1| hypothetical protein Hoch_4080 [Haliangium ochraceum DSM 14365]
 gi|262080609|gb|ACY16578.1| Tetratricopeptide TPR_4 [Haliangium ochraceum DSM 14365]
          Length = 1185

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 54/168 (32%), Gaps = 15/168 (8%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RLT            P    + F SDR    +++V +   S   R+  +  A    P
Sbjct: 43  EPVRLTAGGSNQWMGILHPARDALYFVSDRNATAEIFVQEPVDSGP-RLLFESNADVSWP 101

Query: 353 VWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERL------LVEDSNLQAPTWSPSGRSLI 405
             SP G  +A+    +     + V      + R+          S+   P W   GRSL 
Sbjct: 102 QPSPDGTHLAYISTQADAAGDLCVRALPAGEARVGEERCFTGLGSSEMQPLWLDGGRSLG 161

Query: 406 FSRKKDGDTGSKLYSIDLNGRN-------ETLINTPAYASDPQWVGFM 446
              +       +L    LNG         E  +   A +    W+ ++
Sbjct: 162 VLTRGGLHDDYRLRRFSLNGGPKSGELVVERNMLGVAASPRGAWLAYV 209



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 75/239 (31%), Gaps = 38/239 (15%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQK 278
            P +  + + + D      +++ +  +D  P+ +    + +  P+ S +G      S Q 
Sbjct: 60  HPARDALYFVS-DRNATAEIFVQEP-VDSGPRLLFESNADVSWPQPSPDGTHLAYISTQA 117

Query: 279 DEAMDIYSVDLQSNATER-----LTNTLFINISASYSPDSSQIVFESDREG---KEQLYV 330
           D A D+    L +           T      +   +  D  + +    R G     +L  
Sbjct: 118 DAAGDLCVRALPAGEARVGEERCFTGLGSSEMQPLWL-DGGRSLGVLTRGGLHDDYRLRR 176

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLV- 387
              NG  +       E +      SP+G  +A+     + E+  I           LL  
Sbjct: 177 FSLNGGPKSG-ELVVERNMLGVAASPRGAWLAYVPLARTVEQVGIAFANASQGGLALLRP 235

Query: 388 -------------EDSNLQAPTWSPSGRSLIFSRK---------KDGDTGSKLYSIDLN 424
                             + P +S  G  L F++           DG+  S L+ +  +
Sbjct: 236 ARPQAQPVRFTPERPGLTEFPAFSLDGGYLYFAQYLNDSNGDGRVDGNDNSVLFRVPFD 294



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 52/321 (16%), Positives = 95/321 (29%), Gaps = 66/321 (20%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
                W  I H   D +Y           +  +FV E V SG                  
Sbjct: 50  GGSNQWMGILHPARDALYF----VSDRNATAEIFVQEPVDSGPR---------------- 89

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMIL 261
           L    +  +  P+ SP+   +AY +   +      +R            +      S  +
Sbjct: 90  LLFESNADVSWPQPSPDGTHLAYISTQADAAGDLCVRALPAGEARVGEERCFTGLGSSEM 149

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVD-------LQSNATERLTNTLFINISAS-----Y 309
            P +  +G R+L  + +    D Y +         +S       N L +  S       Y
Sbjct: 150 QPLW-LDGGRSLGVLTRGGLHDDYRLRRFSLNGGPKSGELVVERNMLGVAASPRGAWLAY 208

Query: 310 SPDSSQ-----IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            P +       I F +  +G   L       +   R + ++      P +S  G  + F 
Sbjct: 209 VPLARTVEQVGIAFANASQGGLALLRPARPQAQPVRFTPERPGLTEFPAFSLDGGYLYFA 268

Query: 365 KF-----------SGEKFAIGVMKKD---------GSQERLLVEDSNLQAPTWSPSGRSL 404
           ++             +   +  +  D          + E+L     N + P   P+   L
Sbjct: 269 QYLNDSNGDGRVDGNDNSVLFRVPFDAAAAVPVRASAAEQLTSAQWNCRYPM--PAAERL 326

Query: 405 IFSRKKDGDTGSKLYSIDLNG 425
           I +    G     +Y++ L G
Sbjct: 327 IVTCAHQGS--LDIYALPLTG 345


>gi|312214266|emb|CBX94259.1| hypothetical protein [Leptosphaeria maculans]
          Length = 494

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 69/208 (33%), Gaps = 14/208 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              + +     + +   +FSP+  ++A A+ D      + +           +    + I
Sbjct: 88  YVPKLVLHGHKKGISCLKFSPDGTRIASASAD----CTIKIWSYPSGSLEHTLEGHLAGI 143

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S +  + L S   D+++ ++                    S ++SP  + +V  S
Sbjct: 144 NTLSWSPD-SKILASGSDDKSIRLWDTTTGLAHPTPFIGHHNYVYSIAFSPKGNMLVSGS 202

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E +YV     +   R             +   G LI      G    I V     
Sbjct: 203 Y---DEAVYVWDVRAARVMRSLPAHSDPVGGVDFVRDGTLIVSCSHDG---LIRVWDTAT 256

Query: 381 SQ-ERLLVEDSNLQAPT--WSPSGRSLI 405
            Q  R LV + N    +  +SP+GR ++
Sbjct: 257 GQCLRTLVHEDNKAVTSVIFSPNGRYVL 284



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 63/203 (31%), Gaps = 11/203 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            +KG    +       + S     ++ +      ++ +        +    +SP+ + +A
Sbjct: 97  HKKGISCLKFSPDGTRIASASADCTIKIWSYPSGSLEHTLEGHLAGINTLSWSPDSKILA 156

Query: 228 YATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             + D      + L DT      P       + + +  FS  G   + S   DEA+ ++ 
Sbjct: 157 SGSDDK----SIRLWDTTTGLAHPTPFIGHHNYVYSIAFSPKGNMLV-SGSYDEAVYVWD 211

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDK 345
           V         L           +  D + IV  S       + V  +      R +  + 
Sbjct: 212 VRAA-RVMRSLPAHSDPVGGVDFVRDGTLIVSCSH---DGLIRVWDTATGQCLRTLVHED 267

Query: 346 EASYFDPVWSPQGDLIAFTKFSG 368
             +    ++SP G  +      G
Sbjct: 268 NKAVTSVIFSPNGRYVLAWTLDG 290


>gi|297269918|ref|XP_001118316.2| PREDICTED: uncharacterized WD repeat-containing protein
           ZC302.2-like [Macaca mulatta]
          Length = 663

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 96/270 (35%), Gaps = 19/270 (7%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H       +++  E+    +       +  S   ++    +  +   +++      + + 
Sbjct: 320 HVPCAASIRAMATEEKKPETEAARAQPTPSSSATQSKPTPVKPN-YALKFTLAGHTKAVS 378

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             +FSPN + +A ++ D      + +      +  K I   +  I    +SS+    L+S
Sbjct: 379 SVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGISDVAWSSD-SNLLVS 433

Query: 276 VQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
              D+ + I+  D+ S    + L          +++P S+ IV  S     E + +    
Sbjct: 434 ASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF---DESVRIWDVK 488

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--L 392
                +             ++  G LI  + + G    I      G   + L++D N  +
Sbjct: 489 TGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASGQCLKTLIDDDNPPV 546

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +SP+G+ ++ +     D   KL+   
Sbjct: 547 SFVKFSPNGKYILAATL---DNTLKLWDYS 573


>gi|302807295|ref|XP_002985360.1| hypothetical protein SELMODRAFT_122132 [Selaginella moellendorffii]
 gi|300146823|gb|EFJ13490.1| hypothetical protein SELMODRAFT_122132 [Selaginella moellendorffii]
          Length = 968

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 79/221 (35%), Gaps = 26/221 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN   +A  + D      V L      +    +  F   I    FS+ G     +  
Sbjct: 66  ALSPNGTVLASGSVDH----SVKLYSYPDGKFQSTVTRFTLPIRCLGFSATGGLLAAAGD 121

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS- 336
            D  + + ++   ++    L          ++ P +  +   +D +G    +++ S  S 
Sbjct: 122 DDG-IKLIAM-ADNSIARILRGHGSPVTWVAFDPKNEYLT-SADSDGTVIFWLISSGKSL 178

Query: 337 -----DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                   RI  +   S     WSP G+L+A     G K  + ++ +D ++E    +  +
Sbjct: 179 HTLTQIAPRIDVEFSESSNCVAWSPDGNLLA---LPGRKSDVLLLDRDTAEEICTFKGGH 235

Query: 392 LQAPT---WSPSGRSLIFSRKKDGDTGSKLYSI----DLNG 425
               +   WS +G+ L        D    L+ +    D++G
Sbjct: 236 TSPVSALAWSLNGKYLA---TAGSDLQVVLWDVEKQQDIDG 273


>gi|238749515|ref|ZP_04611020.1| Oligogalacturonide lyase [Yersinia rohdei ATCC 43380]
 gi|238712170|gb|EEQ04383.1| Oligogalacturonide lyase [Yersinia rohdei ATCC 43380]
          Length = 388

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 68/190 (35%), Gaps = 31/190 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
           +S + F        ++   + +++ DG+N+R + T +  +      + P+   + Y +Y 
Sbjct: 200 DSTVAFC-HEGPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYM 258

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFR------SMILAPRFSSNGKRALISVQKDEAMDI-- 284
                R            +++ +        S         +G  A + VQ D    I  
Sbjct: 259 KASPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEN 318

Query: 285 ----YSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFESDREGKE 326
               Y  ++++    ++      + S               S++PD  QI+F SD  GK 
Sbjct: 319 DPFLYVFNMKNGTQHQVARH---DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKP 375

Query: 327 QLYVMQSNGS 336
            LY++    S
Sbjct: 376 ALYLVTLPES 385



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/236 (9%), Positives = 70/236 (29%), Gaps = 35/236 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           + P      +  +         +           I      +  P +   +        +
Sbjct: 149 WQPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ ++   +   ++ T+    +     + PD S +V+ S  +      +Y 
Sbjct: 209 GPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYMKASPDRFIYS 268

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMK 377
                 + ++++     S+    +   G L+                + I       V  
Sbjct: 269 ADPETLENRQLTSMPACSHLMSNY--DGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326

Query: 378 K-DGSQERLLVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +G+Q ++   D++ +            P+++P  + ++F+    G     L ++
Sbjct: 327 MKNGTQHQVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLVTL 382



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 80/240 (33%), Gaps = 25/240 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
               +++    +  +D      +       P  +   R+      F+ +G + L     D
Sbjct: 1   MAKGKQIPLTFHTYQDASTGAQVTRLT---PPDVTCHRNYFYQKCFTRDGSKLLFGGAFD 57

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + Y +DL +    +LT     N    + SPD   + +  +     ++ +     +  
Sbjct: 58  GPWNYYLLDLNTQVATQLTEGHGDNTFGGFLSPDDDALFYVKEGRNLMRVDLASLAENVV 117

Query: 339 KRI--SQDKEASYFDPV--------------WSPQGDLIAFTKFSGEKFAIGVMKKD--- 379
            ++        ++                  W P  D   F +F   K    +M+ D   
Sbjct: 118 YQVPEEWVGYGTWVANSDCTKLVGIEIKREDWQPLTDWKKFHEFYFTKPCCRLMRVDLKT 177

Query: 380 GSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLINTPAYA 437
           G    +L E+  L  P + P    ++ F  +   D   ++++ I+ +G N   + T A  
Sbjct: 178 GESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGSNMRKVKTHAEG 237



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 76/260 (29%), Gaps = 47/260 (18%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F+ +  K+ +     +     YL+D     A +              S +   
Sbjct: 36  NYFYQKCFTRDGSKLLFGG-AFDGPWNYYLLDLNTQVATQLTEGHGDNTFGGFLSPDDDA 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD---------- 321
                   E  ++  VDL S     L   +   +   +    + +   SD          
Sbjct: 95  LFYV---KEGRNLMRVDLAS-----LAENVVYQVPEEWVGYGTWVA-NSDCTKLVGIEIK 145

Query: 322 -REGKE-----------------QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIA 362
             + +                  +L  +     +   I Q+ +     P++ P     +A
Sbjct: 146 REDWQPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQW-LGHPIYRPYDDSTVA 204

Query: 363 FTKFSGEKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           F            + ++ +DGS  R +    E  +     W P G +L++          
Sbjct: 205 FCHEGPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYMKASPDR 264

Query: 417 KLYSIDLNG-RNETLINTPA 435
            +YS D     N  L + PA
Sbjct: 265 FIYSADPETLENRQLTSMPA 284


>gi|228950707|ref|ZP_04112840.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228808943|gb|EEM55429.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 654

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 96/292 (32%), Gaps = 43/292 (14%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++        +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 32  VAFVKKTADWKDNTYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDARCIAYLSPVGD 90

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              ++++     D    +I + +  +   ++   GK      Q  E  +I          
Sbjct: 91  GENQIFVKSLD-DYREVQITDEKEGVSTFKWGPTGKGLYYVTQSKECEEIKKRKELYGDF 149

Query: 295 ERLTNT------LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           + +          +I I           V +SD +  E   V         +++  K+  
Sbjct: 150 QHIGKEHQNDCLYYIEIE---------KVIQSDTDEHENRVVY--------QLTDGKDFH 192

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWSPSG 401
             +   S  G  + F               + ++     + + L V+     +  +SP G
Sbjct: 193 IHEFDISNDGKKVVFITTPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPDG 252

Query: 402 RSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             + ++         R    D+  ++Y ++     + L N  +     QW  
Sbjct: 253 SKICYTASIREKDYYRNHIQDSTLEIYDMNTGEVIQPLTNFDSTVMPLQWTA 304



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 99/291 (34%), Gaps = 52/291 (17%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----- 234
           ++     G  +N + V   D      +T  ++ +    ++ P  + + Y T   E     
Sbjct: 82  IAYLSPVGDGENQIFVKSLDDYREVQITDEKEGVSTF-KWGPTGKGLYYVTQSKECEEIK 140

Query: 235 ------------------------DILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSS 267
                                   +I +V   DT                        S+
Sbjct: 141 KRKELYGDFQHIGKEHQNDCLYYIEIEKVIQSDTDEHENRVVYQLTDGKDFHIHEFDISN 200

Query: 268 NGKRALISVQKDEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-S 320
           +GK+ +        M      D+Y + +++   ++L     +  S  +SPD S+I +  S
Sbjct: 201 DGKKVVFITTPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPDGSKICYTAS 260

Query: 321 DREGKE--------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            RE            L +   N  +  +   + +++     W+ +G  I         + 
Sbjct: 261 IREKDYYRNHIQDSTLEIYDMNTGEVIQPLTNFDSTVMPLQWTAKG--ILIRWQDKTNYR 318

Query: 373 IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           IG++ +DG+ E L  + D  +   + +  G  + +++    +T  ++Y  D
Sbjct: 319 IGLLAEDGTVEALSDKIDGFIMDASITKDGNHITYNKAITNET-FEIYLDD 368



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 68/201 (33%), Gaps = 43/201 (21%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDS 313
           + +   S +GK      +  +  D      ++  +     +  L+N    +    +SPD+
Sbjct: 20  VSSTNISDDGKNVAFVKKTADWKDNTYRNHVWIYEKDKKQSYPLSNGDIDSTHPLWSPDA 79

Query: 314 SQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----- 367
             I + S   +G+ Q++V   +   + +I+ +KE       W P G  + +   S     
Sbjct: 80  RCIAYLSPVGDGENQIFVKSLDDYREVQITDEKEG-VSTFKWGPTGKGLYYVTQSKECEE 138

Query: 368 --------GEKFAIG---------------VMKKDGSQ-----ERLLVE--DSNLQAPTW 397
                   G+   IG               V++ D  +        L +  D ++     
Sbjct: 139 IKKRKELYGDFQHIGKEHQNDCLYYIEIEKVIQSDTDEHENRVVYQLTDGKDFHIHEFDI 198

Query: 398 SPSGRSLIFSRKKDGDTGSKL 418
           S  G+ ++F      +    +
Sbjct: 199 SNDGKKVVFITTPSSNMADYI 219



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 81/217 (37%), Gaps = 24/217 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMI 260
            LT  +D  + E   S + +KV + T    ++      D  I        +++   + + 
Sbjct: 184 QLTDGKDFHIHEFDISNDGKKVVFITTPSSNMADYINGDLYILHIKAGELQKLNVDKLLG 243

Query: 261 LAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +  FS +G +   +             +D  ++IY ++      + LTN     +   +
Sbjct: 244 GSVCFSPDGSKICYTASIREKDYYRNHIQDSTLEIYDMN-TGEVIQPLTNFDSTVMPLQW 302

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSG 368
           +     I+     +   ++ ++  +G+  + +S   +    D   +  G+ I + K  + 
Sbjct: 303 TAKG--ILIRWQDKTNYRIGLLAEDGT-VEALSDKIDGFIMDASITKDGNHITYNKAITN 359

Query: 369 EKFAIGVMKKDGSQERLLVED---SNLQAPTW-SPSG 401
           E F I +  K  + E    +    SN +  +W S  G
Sbjct: 360 ETFEIYLDDKKITDENSFFKGKLKSNREIISWKSSDG 396


>gi|215489029|ref|YP_002331460.1| hypothetical protein E2348C_3999 [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312967901|ref|ZP_07782113.1| uncharacterized protein yidR [Escherichia coli 2362-75]
 gi|215267101|emb|CAS11547.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
 gi|312287462|gb|EFR15370.1| uncharacterized protein yidR [Escherichia coli 2362-75]
 gi|323189576|gb|EFZ74856.1| hypothetical protein ECRN5871_2259 [Escherichia coli RN587/1]
          Length = 404

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT T        +NI   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRIYPGLVNIPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +          +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWMED------GQLWITETD 403



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 12/177 (6%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFS 220
           I +    E G   +  + +S +  +        V  R       + P    I     R +
Sbjct: 235 IVELPKDEAGWKAAGEVPLSGTETTLPAPPRGVVQRRLTFTHHRIYPGLVNIPRHWVRCN 294

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     +    
Sbjct: 295 PQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
              I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 353 --RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 403


>gi|167533566|ref|XP_001748462.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772981|gb|EDQ86626.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1113

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/309 (12%), Positives = 88/309 (28%), Gaps = 55/309 (17%)

Query: 107  GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            GA+ +   ++ K+   +  VE   W  +   +     F       R  AH   D +  + 
Sbjct: 837  GAEAVKVSKLFKDFYSQFAVE---WTPQTGAEADKIGF------QRITAHVSVDSMLYAS 887

Query: 167  TGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRD-----GANIRYLTPSRDQILFEPR 218
               +      ++          +G     + V+  D     G          D  +    
Sbjct: 888  GWTRLCATLLDTARCVARFPEQAGASSEVMRVLHDDFVTSVGFLPDGRYVGHDARVTSVG 947

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            +SP+ + V   ++D      + + D         +     ++++  +S +G+        
Sbjct: 948  YSPDGRFVVSGSWDK----TLRVWDALTGACLHTLYGHDDIVMSVGYSPDGRYV------ 997

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                D + + +                   YSPD   +V        + L V  ++    
Sbjct: 998  --GHDDFVMSVG------------------YSPDGRYVV---SGLWDKTLRVWDASTGVC 1034

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPT 396
                   +       +SP G  +           + V           +      + +  
Sbjct: 1035 LHTLYGHDDIVMSVGYSPDGRYVVSGSCDKT---LRVWDVSTGACLHTLHGHVGPVMSVG 1091

Query: 397  WSPSGRSLI 405
            +SP GR ++
Sbjct: 1092 YSPDGRYVV 1100



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 64/205 (31%), Gaps = 31/205 (15%)

Query: 96   SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE------FRLWDVKDRK---QIIGKK--- 143
            S+    D   +G    VT  V      R  V        R+WD         + G     
Sbjct: 927  SVGFLPDGRYVGHDARVT-SVGYSPDGRFVVSGSWDKTLRVWDALTGACLHTLYGHDDIV 985

Query: 144  -FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
                     R + H   D +        G            VVSG+   +L V D     
Sbjct: 986  MSVGYSPDGRYVGH--DDFVMSVGYSPDG----------RYVVSGLWDKTLRVWDASTGV 1033

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
              +     D I+    +SP+ + V   + D      + + D         +      +++
Sbjct: 1034 CLHTLYGHDDIVMSVGYSPDGRYVVSGSCDK----TLRVWDVSTGACLHTLHGHVGPVMS 1089

Query: 263  PRFSSNGKRALISVQKDEAMDIYSV 287
              +S +G+  ++S  +D  + ++ V
Sbjct: 1090 VGYSPDGRY-VVSGSEDTTVRVWEV 1113



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 38/141 (26%), Gaps = 23/141 (16%)

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                  S  YSPD     F       + L V  +            +       +SP G 
Sbjct: 939  HDARVTSVGYSPDGR---FVVSGSWDKTLRVWDALTGACLHTLYGHDDIVMSVGYSPDGR 995

Query: 360  LIA---FTKFSG----EKFA--------IGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGR 402
             +    F    G     ++         + V           L   D  + +  +SP GR
Sbjct: 996  YVGHDDFVMSVGYSPDGRYVVSGLWDKTLRVWDASTGVCLHTLYGHDDIVMSVGYSPDGR 1055

Query: 403  SLIFSRKKDGDTGSKLYSIDL 423
             ++       D   +++ +  
Sbjct: 1056 YVV---SGSCDKTLRVWDVST 1073


>gi|108759879|ref|YP_630216.1| hypothetical protein MXAN_1981 [Myxococcus xanthus DK 1622]
 gi|108463759|gb|ABF88944.1| hypothetical protein MXAN_1981 [Myxococcus xanthus DK 1622]
          Length = 497

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/260 (15%), Positives = 86/260 (33%), Gaps = 40/260 (15%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILR 238
           V+ + +    + +  V   D A         ++    PR++P   ++A+     E     
Sbjct: 138 VAFTAMDDTDEMAAVVTRFD-APEPTRLSDAEENSLYPRWNPAGNRIAFVQGATETGTST 196

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPR-----------FSSNGKRALISVQKDEAMD-IYS 286
             L    + R    +    +M+               +   G   L   +  +++  I  
Sbjct: 197 GNLAGELVARDVPLVAGAPTMLANGTTGSTEGFLYLEWEP-GDSLLYVRRAGDSISGISR 255

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V  +    E++T    +  S ++  + +   F +   G     V    G     ++    
Sbjct: 256 VPAEGGTVEQVT---ALGSSPAW-RNGNTFAFSTATVGISTATV----GGAPTPLAIAG- 306

Query: 347 ASYFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVE-----------DS 390
            +   P ++   D + F     T+  G   A+ ++   G+  + + E           DS
Sbjct: 307 TTAEQPHYNRVNDQLLFLRPDDTRPVGLNAALYIVPVRGAAVQTIAEFTTAAVEGGSVDS 366

Query: 391 NLQAPTWSPSGRSLIFSRKK 410
            +  PTW+P G  + + R  
Sbjct: 367 YIANPTWAPDGSWVAYVRAY 386



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 79/255 (30%), Gaps = 43/255 (16%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----------S 275
           VA+   DD D +   +        P R+ +     L PR++  G R             +
Sbjct: 138 VAFTAMDDTDEMAAVVTRFDA-PEPTRLSDAEENSLYPRWNPAGNRIAFVQGATETGTST 196

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQIVFESDREGKEQLYVM 331
                 +    V L + A   L N    +        + P  S +      +    +  +
Sbjct: 197 GNLAGELVARDVPLVAGAPTMLANGTTGSTEGFLYLEWEPGDSLLYVRRAGDSISGISRV 256

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            + G   ++++         P W   G+  AF+  +     I      G+   L +  + 
Sbjct: 257 PAEGGTVEQVTALG----SSPAW-RNGNTFAFSTATVG---ISTATVGGAPTPLAIAGTT 308

Query: 392 LQAPTWSPSGRSLIFSR---KKDGDTGSKLYSIDLNGRNETL-----------------I 431
            + P ++     L+F R    +     + LY + + G                      I
Sbjct: 309 AEQPHYNRVNDQLLFLRPDDTRPVGLNAALYIVPVRGAAVQTIAEFTTAAVEGGSVDSYI 368

Query: 432 NTPAYASDPQWVGFM 446
             P +A D  WV ++
Sbjct: 369 ANPTWAPDGSWVAYV 383



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 58/185 (31%), Gaps = 24/185 (12%)

Query: 271 RALISVQKDEAMDIYSVDL-QSNATERLTNTLFINISASYSPDSSQIVF----------E 319
               +   D       V    +    RL++    ++   ++P  ++I F           
Sbjct: 137 HVAFTAMDDTDEMAAVVTRFDAPEPTRLSDAEENSLYPRWNPAGNRIAFVQGATETGTST 196

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEAS---YFDPVWSPQGDLIAFTKFSGEKFA-IGV 375
            +  G+     +         ++     S   +    W P GD + + + +G+  + I  
Sbjct: 197 GNLAGELVARDVPLVAGAPTMLANGTTGSTEGFLYLEWEP-GDSLLYVRRAGDSISGISR 255

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +  +G     +    +  +P W  +G +  FS    G     + +  + G    L     
Sbjct: 256 VPAEGGTVEQVTALGS--SPAWR-NGNTFAFSTATVG-----ISTATVGGAPTPLAIAGT 307

Query: 436 YASDP 440
            A  P
Sbjct: 308 TAEQP 312


>gi|316941224|gb|ADU75258.1| hypothetical protein Clo1313_2223 [Clostridium thermocellum DSM
           1313]
          Length = 210

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 69/193 (35%), Gaps = 21/193 (10%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           G+ +    + ++  N  R    +      +++  D  S    +L    F + S  +    
Sbjct: 34  GDSQKFEGSVKYVPNSDRISFVLD----YELHIYDRSSGTLTKLFEVAFNSYS--WDNTG 87

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            ++++ SD +  E +Y+     +++++I          PV+S   + IA+    G    +
Sbjct: 88  KKLLY-SDYD--ENIYIYDMESNEKRKILTG-----ICPVYSSSNEYIAYI---GIDQRL 136

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKLYSIDL-NGRNET 429
            V   +  ++   V   +     +SP  + ++   +           LY +D   G+ + 
Sbjct: 137 TVYNVNTGKKWRTVPVDDSARYIFSPDDKYILLGTEYADLMSFPHYTLYILDYKTGKKKR 196

Query: 430 LINTPAYASDPQW 442
           L           W
Sbjct: 197 LFGGEGNVPSLDW 209


>gi|256005583|ref|ZP_05430542.1| hypothetical protein ClothDRAFT_2403 [Clostridium thermocellum DSM
           2360]
 gi|255990418|gb|EEU00541.1| hypothetical protein ClothDRAFT_2403 [Clostridium thermocellum DSM
           2360]
          Length = 214

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 69/193 (35%), Gaps = 21/193 (10%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           G+ +    + ++  N  R    +      +++  D  S    +L    F + S  +    
Sbjct: 38  GDSQKFEGSVKYVPNSDRISFVLD----YELHIYDRSSGTLTKLFEVAFNSYS--WDNTG 91

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            ++++ SD +  E +Y+     +++++I          PV+S   + IA+    G    +
Sbjct: 92  KKLLY-SDYD--ENIYIYDMESNEKRKILTG-----ICPVYSSSNEYIAYI---GIDQRL 140

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKLYSIDL-NGRNET 429
            V   +  ++   V   +     +SP  + ++   +           LY +D   G+ + 
Sbjct: 141 TVYNVNTGKKWRTVPVDDSARYIFSPDDKYILLGTEYADLMSFPHYTLYILDYKTGKKKR 200

Query: 430 LINTPAYASDPQW 442
           L           W
Sbjct: 201 LFGGEGNVPSLDW 213


>gi|226294289|gb|EEH49709.1| WD repeat-containing protein [Paracoccidioides brasiliensis Pb18]
          Length = 790

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 63/195 (32%), Gaps = 17/195 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  K+A           V + D        R+ +    +    +S +  +  IS   
Sbjct: 478 FSHDGTKLA----TAGRENLVIIYDVATFAVIHRLTDHGGSVAYATWSPDDTKL-ISCSH 532

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D    ++  D+++     LT  +      SA+++PDS   V     + + QL +    G 
Sbjct: 533 DYKARLW--DVETGRCI-LTIDHHHEPVTSAAWAPDSESFV-TGSLDSQSQLCLWSVVGE 588

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAP 395
                         D   SP G  +           + V   +   +E  +    +L   
Sbjct: 589 SL--YKWSGNYRVRDCSISPDGSRLVAISTEKS---VYVYNFETRVEEYSMTLKLDLTCV 643

Query: 396 TWSPSGRSLIFSRKK 410
             S   R ++ S  +
Sbjct: 644 NISRDSRYMLLSTSE 658



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 48/135 (35%), Gaps = 6/135 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   +N + + D     + +        +    +SP+  K+   ++D +      L D  
Sbjct: 487 TAGRENLVIIYDVATFAVIHRLTDHGGSVAYATWSPDDTKLISCSHDYK----ARLWDVE 542

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R    I +    + +  ++ + +   ++   D    +    +   +  +  +  +   
Sbjct: 543 TGRCILTIDHHHEPVTSAAWAPDSES-FVTGSLDSQSQLCLWSVVGESLYKW-SGNYRVR 600

Query: 306 SASYSPDSSQIVFES 320
             S SPD S++V  S
Sbjct: 601 DCSISPDGSRLVAIS 615


>gi|149921679|ref|ZP_01910128.1| WD-40 repeat [Plesiocystis pacifica SIR-1]
 gi|149817523|gb|EDM76993.1| WD-40 repeat [Plesiocystis pacifica SIR-1]
          Length = 744

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 85/208 (40%), Gaps = 14/208 (6%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            F+  +    E V +     ++ V   RDGA + +     D+I+    FSP+ + +A A 
Sbjct: 374 IFDLAVDRAGERVATAAHDGTVRVWRIRDGA-LLHEFDGIDRIVNAVAFSPDGRSLASA- 431

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                 L V L         +  G+ ++ ++   F + G+R + SV  D  + I+  DL 
Sbjct: 432 ----GKLGVTLWSLEDGSVRELGGHNQAWVV--DFDARGERLV-SVGSDRLVRIW--DLA 482

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +  +  L+        A++ P  +++   SD +G  +++    +G    R+ +       
Sbjct: 483 TGESRALSGHEGRVFEAAFRPGGAELATASD-DGSVRVWGAD-SGDVIARLPEYDPTVLA 540

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
              WSP G ++A +   G  +  G    
Sbjct: 541 MLAWSPDGSVLAASAQDGGAWLWGSADL 568



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 73/221 (33%), Gaps = 16/221 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RF 265
               +  +FE  F P   ++A A+ D      V +          R+  +   +LA   +
Sbjct: 489 LSGHEGRVFEAAFRPGGAELATASDDG----SVRVWGADSGDVIARLPEYDPTVLAMLAW 544

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATER----LTNTLFINISASYSPDSSQIVFESD 321
           S +G     S Q   A    S DL   A +     L        + ++   S ++   SD
Sbjct: 545 SPDGSVLAASAQDGGAWLWGSADLLWGAEQPTPTLLRERGARVRALAFDARSQRLATGSD 604

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +G  +++ +  +G   +R+S   E       ++  G  +    +      +     D  
Sbjct: 605 -DGVVRVWALD-SGDLVQRLSGHAE-PVSALAFADSGRALVSGSWDST---VRFWDLDAG 658

Query: 382 QERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +  +L      +     S S R L+ +          L  +
Sbjct: 659 RALILTGHGEEVNDVVVSASTRMLVSASADGSARTWDLSRM 699



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 52/149 (34%), Gaps = 24/149 (16%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D A +++  DL +    RL        S + SPD+  ++  S R+G+ + +  +   
Sbjct: 52  YSADGAGEVWRWDLSTAKGRRLHVHEGEVTSLALSPDAGVLISGS-RDGELRAWTPEEGS 110

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------------------KFAIGVMK 377
           +   R            V+S  G+ +A     G+                     +  + 
Sbjct: 111 TTLAR----YPEGITTVVFSEGGERVAVGVRDGKVRMYAGQGTLDLERELGVGSLVYAVA 166

Query: 378 KDGSQERLLVEDSNLQAPTWS-PSGRSLI 405
            DG+ ERLL    + +   WS   G  L 
Sbjct: 167 FDGAGERLLTGSKDGRGRVWSLADGELLA 195


>gi|124009249|ref|ZP_01693929.1| dipeptidyl aminopeptidase [Microscilla marina ATCC 23134]
 gi|123985131|gb|EAY25070.1| dipeptidyl aminopeptidase [Microscilla marina ATCC 23134]
          Length = 765

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 61/391 (15%), Positives = 131/391 (33%), Gaps = 46/391 (11%)

Query: 67  EVVSKDLQRSDVFNLI--SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL 124
           ++V  D  RS   N++  +Q       + P SI  +Q W++   Q+L+     +  +   
Sbjct: 85  DIVKYD-TRSGKRNVLIDAQKLIPSGQSKPLSISNYQ-WSADKQQLLIFTNTRRVWRYHT 142

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           + ++ +  +K     + +     P S    A    ++   +   +   +  ++       
Sbjct: 143 KGDYWVLSLKSGN--LNQLGKGLPKSSLMFAKFSPNNQQVAYVSKHNVYVEQLTDNKIKQ 200

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           ++    + L     D         +RD      R+SP+ +++A+   D  +I   Y+++ 
Sbjct: 201 LTFNGTDRLINGTFD-WAYEEEFNARDGF----RWSPDSKQIAFWQVDARNIRNFYMINN 255

Query: 245 RIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                 + +   +  +   P                 A  +  +DL      R       
Sbjct: 256 TDSVYSQLVPVQYPKVGETPS----------------ACRVGVIDLNGGK-TRWMAIPGN 298

Query: 304 NISASYSPD---SSQI--VFESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWS 355
           N   +Y P      Q   V+      K+    ++   +      +I  +KE ++ D V  
Sbjct: 299 NQQ-NYLPRMMWGKQPGKVYVQQVNRKQNHLKVWACNTYTGKASQIYTEKETAWIDVVSQ 357

Query: 356 PQ------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFS 407
                   G+   +T        +  + KDGS+++L+ + +          P G    F 
Sbjct: 358 SDWKWLKKGNEFTWTTEKDGWRHLYKVAKDGSKQQLITQGNFDVVNVLEIDPKGGYCYFI 417

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
              D  T   LY   L  + +    TP+   
Sbjct: 418 ASPDNPTQRYLYRASLYKKGKATRLTPSNQP 448


>gi|323497136|ref|ZP_08102156.1| WD-40 repeat-containing protein [Vibrio sinaloensis DSM 21326]
 gi|323317711|gb|EGA70702.1| WD-40 repeat-containing protein [Vibrio sinaloensis DSM 21326]
          Length = 941

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 88/247 (35%), Gaps = 16/247 (6%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
              +    K  L V  RL    D + +    F      W++I         +     +  
Sbjct: 355 IVSLTSHPKSGLIVS-RLVSYADGRGVTDL-FAFKDGKWQRITER------ERFREVRWL 406

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYAT 230
            +   +  S +V      + L +++ + A  + L    +       F  SPN ++V  + 
Sbjct: 407 PSGNQVIASRNVDG---LSELWLLNPEQAENKQLIWRGNNNEVLGGFDVSPNGEQVVASI 463

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              +    +   D    +  ++I N +S+  +P +  + +  + S   D   +IY ++L 
Sbjct: 464 KRAQQGWNLEQYDLGT-KQWRKITNSKSVENSPAY-VDSETVVYSADYDGIFNIYQLNLN 521

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           S    +LT  +    +  +S +   ++++S       +  +    S    + +   A Y 
Sbjct: 522 SGKASQLTREIGGAFNPIWSEE-LGLIYQSYDSQGYTMRRLAQPESLNLVVVEQTNAQYN 580

Query: 351 DPVWSPQ 357
            P  +P 
Sbjct: 581 YPDPAPN 587



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 11/224 (4%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  +V +G  ++ + V  +  A +  LTPS+  +       P    +        D   V
Sbjct: 324 ILFNVRNGEDRDEI-VRYQSSAELATLTPSKGIVSLTS--HPKSGLIVSRLVSYADGRGV 380

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT- 298
             +    D   +RI   R      R+  +G + + S   D   +++ ++ +    ++L  
Sbjct: 381 TDLFAFKDGKWQRITE-RERFREVRWLPSGNQVIASRNVDGLSELWLLNPEQAENKQLIW 439

Query: 299 NTLFINISASY--SPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                 +   +  SP+  Q+V    R +    L          ++I+  K          
Sbjct: 440 RGNNNEVLGGFDVSPNGEQVVASIKRAQQGWNLEQYDLGTKQWRKITNSKSVENSPAYV- 498

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWS 398
              + + ++      F I  +  +  +   L  +      P WS
Sbjct: 499 -DSETVVYSADYDGIFNIYQLNLNSGKASQLTREIGGAFNPIWS 541


>gi|51596692|ref|YP_070883.1| oligogalacturonate lyase [Yersinia pseudotuberculosis IP 32953]
 gi|153948835|ref|YP_001400659.1| oligogalacturonide lyase [Yersinia pseudotuberculosis IP 31758]
 gi|170024031|ref|YP_001720536.1| oligogalacturonide lyase [Yersinia pseudotuberculosis YPIII]
 gi|186895748|ref|YP_001872860.1| WD40 domain-containing protein [Yersinia pseudotuberculosis PB1/+]
 gi|51589974|emb|CAH21606.1| oligogalacturonate lyase [Yersinia pseudotuberculosis IP 32953]
 gi|152960330|gb|ABS47791.1| oligogalacturonide lyase [Yersinia pseudotuberculosis IP 31758]
 gi|169750565|gb|ACA68083.1| Oligogalacturonide lyase [Yersinia pseudotuberculosis YPIII]
 gi|186698774|gb|ACC89403.1| WD40 domain protein beta Propeller [Yersinia pseudotuberculosis
           PB1/+]
          Length = 388

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 69/190 (36%), Gaps = 31/190 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYD 232
           +S + F        ++   + +++ DG+N+R + T +  +      + P+   + Y +Y 
Sbjct: 200 DSTVAFC-HEGPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYL 258

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRS-----MILAPRFS-SNGKRALISVQKDEAMDI-- 284
                R       +    +++ +  +               +G  A + VQ +    I  
Sbjct: 259 KGSSDRFIYSADPVTLKNRQLTSMPACSHLMSNYDGTLMVGDGSDAPVDVQDNSGYKIEN 318

Query: 285 ----YSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFESDREGKE 326
               Y  ++++    R+      + S               S++PD  Q++F SD  GK 
Sbjct: 319 DPFLYVFNIKNGTQHRIARH---DTSWQVFEGDRQVTHPHPSFTPDDKQVLFTSDVHGKP 375

Query: 327 QLYVMQSNGS 336
            LY++    S
Sbjct: 376 ALYMVTLPES 385



 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 79/243 (32%), Gaps = 31/243 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
               +++    +  +D      +       P  +   R+      F+ +G + L     D
Sbjct: 1   MAKGKQIPLTYHTYQDASTGAQVTRLT---PPDVTCHRNYFYQKCFTRDGSKLLFGGAFD 57

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + Y +DL S    +LT     N    + SP+   + +  D      L  +     ++
Sbjct: 58  GPWNYYLLDLNSRVATQLTEGRGDNTFGGFLSPEDDALFYVKD---GRNLMRVDLATLEE 114

Query: 339 KRIS-----QDKEASYFDPV--------------WSPQGDLIAFTKFSGEKFAIGVMKKD 379
             +           ++                  W P  D   F +F   K    +M+ D
Sbjct: 115 NVVYQVPEEWVGYGTWVANSDCTKLVGIEIKREDWQPLTDWKKFHEFYFTKPCCRLMRVD 174

Query: 380 ---GSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLINTP 434
              G    +L E+  L  P + P    ++ F  +   D   ++++ I+ +G N   + T 
Sbjct: 175 LKTGESAVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGSNMRKVKTH 234

Query: 435 AYA 437
           A  
Sbjct: 235 AEG 237



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/238 (12%), Positives = 72/238 (30%), Gaps = 37/238 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           + P      +  +         +           I      +  P +   +        +
Sbjct: 149 WQPLTDWKKFHEFYFTKPCCRLMRVDLKTGESAVILQENQWLGHPIYRPYDDSTVAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ ++   +   ++ T+    +     + PD S +V+ S  +G     +Y 
Sbjct: 209 GPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSSDRFIYS 268

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMK 377
                   ++++     S+    +   G L+                + I       V  
Sbjct: 269 ADPVTLKNRQLTSMPACSHLMSNY--DGTLMVGDGSDAPVDVQDNSGYKIENDPFLYVFN 326

Query: 378 -KDGSQERLLVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            K+G+Q R+   D++ Q            P+++P  + ++F+    G     LY + L
Sbjct: 327 IKNGTQHRIARHDTSWQVFEGDRQVTHPHPSFTPDDKQVLFTSDVHGK--PALYMVTL 382


>gi|284052223|ref|ZP_06382433.1| WD-40 repeat-containing serine/threonin protein kinase [Arthrospira
           platensis str. Paraca]
          Length = 587

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 78/242 (32%), Gaps = 32/242 (13%)

Query: 182 ESVVSGIIKNSLCVMDRD----GANIRYLTPSRDQILFEP---RFSPNQQKVAYATYDDE 234
            + V G  +  L   +      G   R       + L        +P+ + +   T+   
Sbjct: 365 YTQVDGYRRYGLIPANPLLVIRGWPNRMWLLGHKEALGHVYALAIAPDGETLVAGTFGT- 423

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               +                  S + A  FS NG   ++S   D+ + ++      +  
Sbjct: 424 ----IRRWGIHSGEVVNPESVHSSWVRALAFSPNG-EIMVSGSNDKTIRMWW----GSRQ 474

Query: 295 ERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQ--DKEASYFD 351
             +        +  +SP+   +   S DR     + +  +NG   +R+S     +     
Sbjct: 475 RTIEGHTGSVHALVFSPNGQILASGSEDRT----IILWDTNG---RRLSTILAHDLPVNA 527

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRK 409
             ++PQG+++A          I +    GS  RL +        A  +SP G ++  +  
Sbjct: 528 LAFNPQGNVLASASADAS---IRLWNVSGSSRRLTITGHGDSINAIAYSPDGETIASASD 584

Query: 410 KD 411
             
Sbjct: 585 DG 586


>gi|302795779|ref|XP_002979652.1| hypothetical protein SELMODRAFT_111629 [Selaginella moellendorffii]
 gi|300152412|gb|EFJ19054.1| hypothetical protein SELMODRAFT_111629 [Selaginella moellendorffii]
          Length = 968

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 79/221 (35%), Gaps = 26/221 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN   +A  + D      V L      +    +  F   I    FS+ G     +  
Sbjct: 66  ALSPNGTVLASGSVDH----SVKLFSYPDGKFQSTVTRFTLPIRCLGFSATGGLLAAAGD 121

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS- 336
            D  + + ++   ++    L          ++ P +  +   +D +G    +++ S  S 
Sbjct: 122 DDG-IKLIAM-ADNSIARILRGHGSPVTWVAFDPKNEYLA-SADSDGTVIFWLISSGKSL 178

Query: 337 -----DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                   RI  +   S     WSP G+L+A     G K  + ++ +D ++E    +  +
Sbjct: 179 HTLTQIAPRIDVEFSESSNCVAWSPDGNLLA---LPGRKSDVLLLDRDTAEEICSFKGGH 235

Query: 392 LQAPT---WSPSGRSLIFSRKKDGDTGSKLYSI----DLNG 425
               +   WS +G+ L        D    L+ +    D++G
Sbjct: 236 TSPVSALAWSLNGKYLA---TAGSDLQVVLWDVEKQQDIDG 273


>gi|298243853|ref|ZP_06967660.1| WD40 repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297556907|gb|EFH90771.1| WD40 repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 428

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 68/215 (31%), Gaps = 28/215 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P  +K     +D     RV  +DT      +   +    +    ++  G++  +    +
Sbjct: 228 APYGRKSFVDIWDITAGNRVLTIDT-----TRPETSRSYQVSTMVWAPAGEKLAMGYLSE 282

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               +   D  +     +     +  + ++SP  + +          Q  V+    +  +
Sbjct: 283 GKWFVEIWDRLTGRRTPVLAGAAMRGTVAWSPPGTLLAVA-----TPQGMVIYEAQTGHQ 337

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQ 393
             +     + +   WSP G  IA T +SG  +       + V            +     
Sbjct: 338 VTAYSLIKTQYALAWSPDGKRIAMTSYSGGHYWVPTDGTLTVFDASRGSLLTQYDQGQWD 397

Query: 394 AP-------TWSPSGRSLIFSRKKDGDTGSKLYSI 421
                     WSP+G+ L+       + G  L+ I
Sbjct: 398 IAILGMGRMAWSPNGQFLVVV-----NGGINLWKI 427



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 59/172 (34%), Gaps = 27/172 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P  +K+A   Y  E    V + D    R    +    +M     +S  G    ++  +
Sbjct: 268 WAPAGEKLA-MGYLSEGKWFVEIWDRLTGRRTPVLA-GAAMRGTVAWSPPGTLLAVATPQ 325

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                +   + Q+    ++T    I      ++SPD  +I   S   G    Y + ++G+
Sbjct: 326 G----MVIYEAQTG--HQVTAYSLIKTQYALAWSPDGKRIAMTSYSGGH---YWVPTDGT 376

Query: 337 ----DQKR---ISQDKEASY-------FDPVWSPQGDLIAFTKFSGEKFAIG 374
               D  R   ++Q  +  +           WSP G  +         + I 
Sbjct: 377 LTVFDASRGSLLTQYDQGQWDIAILGMGRMAWSPNGQFLVVVNGGINLWKIA 428


>gi|229171018|ref|ZP_04298618.1| Acylamino-acid-releasing enzyme [Bacillus cereus MM3]
 gi|228612454|gb|EEK69676.1| Acylamino-acid-releasing enzyme [Bacillus cereus MM3]
          Length = 654

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 110/303 (36%), Gaps = 52/303 (17%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T      +S+ +        G  KN + V   DG +   +T  ++ +    ++ P  +  
Sbjct: 71  THPLWSPDSKSIAYLRPGGDGANKNQIFVKSIDGCSEVQITDEKEGVNTF-KWEPTGKGF 129

Query: 227 AYATYDDE---------------------DILRVYLMDTR----IDRAPKRIGNFRSMIL 261
            +     E                         +Y ++       D+  +++     +  
Sbjct: 130 YFIAQSKECEEIKKRKERYGDFHHVGKEHQNNCLYYIEIEKVKQNDKQERKVSGVYQLTD 189

Query: 262 APRF-------SSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              F       S++GK+ +     S+      D+Y VD+++   +++     +  S  +S
Sbjct: 190 GKDFYIHNFDISNDGKKVVCMATPSLNDYMNGDLYIVDVEAGELQKMNMDKLLGGSVCFS 249

Query: 311 PDSSQIVF-ESDREGKE--------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           P  S+I +  S RE            L +   N  +  +   D +++     W+ +G  I
Sbjct: 250 PKGSKICYAASIREKDYYRNHIQDSTLEIYDMNTGEVIQPLTDFDSTIMPLQWTAKG--I 307

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                    + IG++ +DG+ E +L E  DS +   + +  G  + +++    +T  ++Y
Sbjct: 308 LIRWQDKTNYRIGLLCEDGTLE-MLSEKVDSFIMDASITRDGNHITYTKAITNET-FEIY 365

Query: 420 SID 422
             D
Sbjct: 366 LDD 368



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/284 (11%), Positives = 82/284 (28%), Gaps = 60/284 (21%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     + N       P +S + K   
Sbjct: 24  NISDDSKNVAFVKRLANWEDNTYRNHVWIYEKDKGKSYPLTNGDIDSTHPLWSPDSKSIA 83

Query: 274 ISVQKDEAM----DIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFES-------- 320
             ++          I+   +   +  ++T+    +N    + P      F +        
Sbjct: 84  Y-LRPGGDGANKNQIFVKSIDGCSEVQITDEKEGVNTF-KWEPTGKGFYFIAQSKECEEI 141

Query: 321 ----DREGKEQ---------------LYVMQSNGSDQK------RISQDKEASYFDPVWS 355
               +R G                  +  ++ N   ++      +++  K+    +   S
Sbjct: 142 KKRKERYGDFHHVGKEHQNNCLYYIEIEKVKQNDKQERKVSGVYQLTDGKDFYIHNFDIS 201

Query: 356 PQGDLIA-FTKFSGEKF---AIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFS--- 407
             G  +      S   +    + ++  +  + + +  D  L  +  +SP G  + ++   
Sbjct: 202 NDGKKVVCMATPSLNDYMNGDLYIVDVEAGELQKMNMDKLLGGSVCFSPKGSKICYAASI 261

Query: 408 ------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
                 R    D+  ++Y ++  G     +        P QW  
Sbjct: 262 REKDYYRNHIQDSTLEIYDMN-TGEVIQPLTDFDSTIMPLQWTA 304



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 46/115 (40%), Gaps = 11/115 (9%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S DS  + F        D   +  +++ + +      ++ + +     P+WSP   
Sbjct: 22  STNISDDSKNVAFVKRLANWEDNTYRNHVWIYEKDKGKSYPLT-NGDIDSTHPLWSPDSK 80

Query: 360 LIAFTKFSGEKFA---IGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+ +  G+      I V   DG S+ ++  E   +    W P+G+   F  + 
Sbjct: 81  SIAYLRPGGDGANKNQIFVKSIDGCSEVQITDEKEGVNTFKWEPTGKGFYFIAQS 135


>gi|309792643|ref|ZP_07687097.1| serine/threonine protein kinase [Oscillochloris trichoides DG6]
 gi|308225309|gb|EFO79083.1| serine/threonine protein kinase [Oscillochloris trichoides DG6]
          Length = 790

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 83/229 (36%), Gaps = 22/229 (9%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
             +  +  +G ++++L + DR G   R     R       R+    Q +           
Sbjct: 445 ADMRRTNEAGRLRDALIMRDRSGTTFRIELEVR-----LSRWGAMLQMI--------SGT 491

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R    +    R  ++I   RS + A   S +G++   S   D+ + I+       A E L
Sbjct: 492 RRINWEGGEVRQIRQIVAHRSGVWALDVSPDGRQIA-SGGWDQRVRIWRT-ADGAAEEVL 549

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            +     +S +YS D     F       +Q+ +         ++   ++       +S  
Sbjct: 550 DDHGGNVLSVAYSHDGR---FLLAGGNSDQIKLWAIRNRRIVQVINSQQGYQESVFFSSD 606

Query: 358 GDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLI 405
           G L+      G   +IGV +  DGS  + L  +   Q  +  P GRS+ 
Sbjct: 607 GQLMI---AHGGDGSIGVWRLRDGSLVQRLQPNVGGQTISLHPDGRSVA 652



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 51/319 (15%), Positives = 100/319 (31%), Gaps = 31/319 (9%)

Query: 54  KFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVT 113
            +   +    ++ ++V+    RS V+  +      ++I +     R + W +  A     
Sbjct: 495 NWEGGEV--RQIRQIVA---HRSGVWA-LDVSPDGRQIASGGWDQRVRIWRT--ADGAAE 546

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY-QSITGEKGD 172
             +   G + L V +      D + ++          W      I   I  Q    E   
Sbjct: 547 EVLDDHGGNVLSVAYS----HDGRFLLAGGNSDQIKLWAIRNRRIVQVINSQQGYQESVF 602

Query: 173 FNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           F+S    +      G    S+ V   RDG+ ++ L P+           P+ + VA    
Sbjct: 603 FSSDGQLMIAHGGDG----SIGVWRLRDGSLVQRLQPNVGGQTI--SLHPDGRSVAIGCA 656

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D      V L      +    +   R  +     S +G   +     D    +   DL +
Sbjct: 657 DS----SVRLWAIGEQKPAAVLTGLRGGVNCLVHSHSGGVLV---GGDGTGVVRIWDLDT 709

Query: 292 NATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           ++  + L        S +  PD   +V          + + + +     ++      S  
Sbjct: 710 HSVRQELRGHQNAVRSVAIHPDGQTVV---SAGVDSTIRIWRVSDGAVLQVLNGHAGSVL 766

Query: 351 DPVWSPQGDLIAFTKFSGE 369
              +SP GDL+      G 
Sbjct: 767 RVAFSPDGDLLISGGVDGT 785


>gi|290473321|ref|YP_003466187.1| hypothetical protein XBJ1_0238 [Xenorhabdus bovienii SS-2004]
 gi|289172620|emb|CBJ79389.1| conserved hypothetical protein [Xenorhabdus bovienii SS-2004]
          Length = 433

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 50/148 (33%), Gaps = 20/148 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFI------NISASY---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T         N+   +   SPD S+I F   D  G  QL+
Sbjct: 275 GTETTLPAPPAGVKQRRLTFTHQNRWPGVVNVPRHWLRTSPDGSKIGFLMKDEAGIVQLW 334

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +  NG    +I+           W  +G  IAF   +    +I +      +   L   
Sbjct: 335 YISPNGGVPVQITHSTHHIQSAFNWDRRGRFIAFVCDN----SIMLCDSQNGEMHRLTAR 390

Query: 390 SNLQAPT-----WSPSGRSLIFSRKKDG 412
           ++  AP+      SP  R + F R  DG
Sbjct: 391 TDD-APSADAIVISPDDRYVAFMRDIDG 417



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 15/129 (11%)

Query: 212 QILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            ++  PR     SP+  K+ +   D+  I++++ +        +   +   +  A  +  
Sbjct: 302 GVVNVPRHWLRTSPDGSKIGFLMKDEAGIVQLWYISPNGGVPVQITHSTHHIQSAFNWDR 361

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-----YSPDSSQIVFESDR 322
            G+             I   D Q+    RLT     + + S      SPD   + F  D 
Sbjct: 362 RGRFIAFVCDNS----IMLCDSQNGEMHRLTART--DDAPSADAIVISPDDRYVAFMRDI 415

Query: 323 EGKEQLYVM 331
           +G  Q+ V+
Sbjct: 416 DGYRQILVV 424



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 49/132 (37%), Gaps = 12/132 (9%)

Query: 256 FRSMILAPR-F---SSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLF-INISASY 309
           +  ++  PR +   S +G +    ++ +   + ++ +        ++T++   I  + ++
Sbjct: 300 WPGVVNVPRHWLRTSPDGSKIGFLMKDEAGIVQLWYISPNGGVPVQITHSTHHIQSAFNW 359

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS 367
                 I F  D      + +  S   +  R++   D   S    V SP    +AF +  
Sbjct: 360 DRRGRFIAFVCDNS----IMLCDSQNGEMHRLTARTDDAPSADAIVISPDDRYVAFMRDI 415

Query: 368 GEKFAIGVMKKD 379
                I V++  
Sbjct: 416 DGYRQILVVETG 427


>gi|152979132|ref|YP_001344761.1| oligogalacturonide lyase [Actinobacillus succinogenes 130Z]
 gi|150840855|gb|ABR74826.1| Oligogalacturonide lyase [Actinobacillus succinogenes 130Z]
          Length = 387

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 28/189 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYAT 230
            F+  I+         ++   +  ++ DG N+R        +      + P+  K+ Y +
Sbjct: 197 PFDDSIIGFCHEGPHDLVDARMWFVNEDGTNVRKAKEHQTGESCTHEFWVPDGSKMIYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-------------ISV 276
           Y  +   R +Y +D       + I       L   F  NG   +              S 
Sbjct: 257 YFKDQTERVIYSIDPNTLENTRLITMPPCSHLMSNF--NGNLLVGDGCDSPVDVADSDSY 314

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLF-----------INISASYSPDSSQIVFESDREGK 325
             +    +Y  D+      +L                 +   S++PD S ++F SD EGK
Sbjct: 315 NIENDPFLYLFDIGKQRITKLAKHSSSWKVLDGDRQITHPHPSFTPDDSAVLFGSDFEGK 374

Query: 326 EQLYVMQSN 334
             +Y+   +
Sbjct: 375 PAIYLADIS 383



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 68/205 (33%), Gaps = 28/205 (13%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           PK +   R+      F+ +G + L +   D   + Y +DLQ+    +LT     N    +
Sbjct: 28  PKEVICHRNYFYQKCFTQDGNKLLFAGDFDGNRNYYLLDLQTQEATQLTEGKGDNTFGGF 87

Query: 310 -SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--------- 359
            S D     +  +      L  +     ++K I    E       W    D         
Sbjct: 88  ISHDDKSFFYVKNES---SLRKVNLETLEEKVIYTVDENWKGYGTWVANSDCTKLVGIEI 144

Query: 360 -------------LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                          AF   +     I V    G  E +L +++ L  PT+ P   S+I 
Sbjct: 145 LKSCWQPLTDWDKFKAFYHTNPTCRLIKVDILTGELEVVLQDNAWLGHPTYRPFDDSIIG 204

Query: 407 SRKKDGD--TGSKLYSIDLNGRNET 429
              +       ++++ ++ +G N  
Sbjct: 205 FCHEGPHDLVDARMWFVNEDGTNVR 229



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 87/254 (34%), Gaps = 37/254 (14%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGK 270
              ++  F+ +  K+ +A   D +  R Y +     +   ++   +       F S + K
Sbjct: 36  NYFYQKCFTQDGNKLLFAGDFDGN--RNYYLLDLQTQEATQLTEGKGDNTFGGFISHDDK 93

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASY--SPDSSQIV---------- 317
                  +     +  V+L++   + + T         ++  + D +++V          
Sbjct: 94  SFFYVKNES---SLRKVNLETLEEKVIYTVDENWKGYGTWVANSDCTKLVGIEILKSCWQ 150

Query: 318 -------FESDREGKEQLYVMQSN--GSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFS 367
                  F++         +++ +    + + + QD  A    P + P    +I F    
Sbjct: 151 PLTDWDKFKAFYHTNPTCRLIKVDILTGELEVVLQD-NAWLGHPTYRPFDDSIIGFCHEG 209

Query: 368 GEKF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSI 421
                   +  + +DG+  R   E    ++ T   W P G  +I+       T   +YSI
Sbjct: 210 PHDLVDARMWFVNEDGTNVRKAKEHQTGESCTHEFWVPDGSKMIYVSYFKDQTERVIYSI 269

Query: 422 DLNG-RNETLINTP 434
           D N   N  LI  P
Sbjct: 270 DPNTLENTRLITMP 283



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/337 (10%), Positives = 100/337 (29%), Gaps = 53/337 (15%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN-------SRILF 179
            + L D++ ++     +          I+H   D  +  +  E             ++++
Sbjct: 61  NYYLLDLQTQEATQLTEGKGDNTFGGFISH--DDKSFFYVKNESSLRKVNLETLEEKVIY 118

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
             +    G       V + D   +  +       + +  + P      +  +   +    
Sbjct: 119 TVDENWKG---YGTWVANSDCTKLVGIE------ILKSCWQPLTDWDKFKAFYHTNPTCR 169

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MDIYSVDLQSNATE 295
            +    +    + +    + +  P +   +        +         ++ V+       
Sbjct: 170 LIKVDILTGELEVVLQDNAWLGHPTYRPFDDSIIGFCHEGPHDLVDARMWFVNEDGTNVR 229

Query: 296 RLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFD 351
           +              + PD S++++ S  + + +  +Y +  N  +  R+      S+  
Sbjct: 230 KAKEHQTGESCTHEFWVPDGSKMIYVSYFKDQTERVIYSIDPNTLENTRLITMPPCSHLM 289

Query: 352 PVWSPQGDLIA-------FTKFSGEKFAI----GVMKKDGSQERLL----------VEDS 390
             +   G+L+              + + I     +   D  ++R+           V D 
Sbjct: 290 SNF--NGNLLVGDGCDSPVDVADSDSYNIENDPFLYLFDIGKQRITKLAKHSSSWKVLDG 347

Query: 391 NLQ----APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           + Q     P+++P   +++F    +G     L  I  
Sbjct: 348 DRQITHPHPSFTPDDSAVLFGSDFEGKPAIYLADISA 384


>gi|17943045|pdb|1K32|A Chain A, Crystal Structure Of The Tricorn Protease
 gi|17943046|pdb|1K32|B Chain B, Crystal Structure Of The Tricorn Protease
 gi|17943047|pdb|1K32|C Chain C, Crystal Structure Of The Tricorn Protease
 gi|17943048|pdb|1K32|D Chain D, Crystal Structure Of The Tricorn Protease
 gi|17943049|pdb|1K32|E Chain E, Crystal Structure Of The Tricorn Protease
 gi|17943050|pdb|1K32|F Chain F, Crystal Structure Of The Tricorn Protease
          Length = 1045

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 85/238 (35%), Gaps = 47/238 (19%)

Query: 221 PN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           P+    ++ +   DD     ++  D +     K + N   +  A RF  +G++  I V +
Sbjct: 20  PDIHGDRIIFVCCDD-----LWEHDLKSGSTRKIVSNLGVINNA-RFFPDGRKIAIRVMR 73

Query: 279 D---EAMDIYSVDLQSNATERLTNTLFINIS-------ASYSPDSSQIV-------FES- 320
                  D+Y  + ++   +R+T     +         A + PD + I+       F S 
Sbjct: 74  GSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSM 133

Query: 321 ---DREGKEQLYVMQSNGSDQKRISQD------KEASYFDPVWSPQGDLIAFTKFSGEKF 371
               R   + +  +  N      I            ++  P W             G + 
Sbjct: 134 TCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHW--------KGYRGGTRG 185

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            I +    G+ ++++   +++ +P     G  + F    DG    ++YS DL+G++  
Sbjct: 186 KIWIEVNSGAFKKIVDMSTHVSSPVIV--GHRIYFITDIDG--FGQIYSTDLDGKDLR 239



 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 81/250 (32%), Gaps = 30/250 (12%)

Query: 192 SLCVMDRDGANIRYLTPS-----RDQILFEPR-----FSP-NQQKVAYATYDDEDILRVY 240
           S+ + + D   I  +         D+I+  P      FSP +   +A+ +     I  V 
Sbjct: 266 SIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVS 325

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                    P RI   R          + K A I   ++    +   D ++   E+    
Sbjct: 326 GTYVLKVPEPLRIRYVRRGG-------DTKVAFIHGTREGDF-LGIYDYRTGKAEKFEEN 377

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           L    +     +    V  +DR    ++  +         I + +EA   D   S     
Sbjct: 378 LGNVFAMGVDRNGKFAVVANDR---FEIMTVDLETGKPTVIERSREAMITDFTISDNSRF 434

Query: 361 IAFT----KFSGEKF---AIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           IA+         + +   AI V   +G +      E+S+  AP +    ++L +   +  
Sbjct: 435 IAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSL 494

Query: 413 DTGSKLYSID 422
           D       ++
Sbjct: 495 DPSPDRVVLN 504



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 72/201 (35%), Gaps = 38/201 (18%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G R +     D    ++  DL+S +T ++ + L +  +A + PD  +I     R  
Sbjct: 20  PDIHGDRIIFVCCDD----LWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGS 75

Query: 325 ---KEQLYVMQSNGSDQKRISQDKEASYFDPVWS------PQGDLIA-------FTKFSG 368
                 LY       + KRI+     S    +++      P G+LI        F+  + 
Sbjct: 76  SLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMT- 134

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLY 419
               +  ++ DG     L          ++  GR +I         +   + G  G    
Sbjct: 135 ---CLYRVENDGINFVPLNLGPATHI-LFA-DGRRVIGRNTFELPHWKGYRGGTRGKIWI 189

Query: 420 SIDLNGRNETLINTPAYASDP 440
            ++ +G  + +++   + S P
Sbjct: 190 EVN-SGAFKKIVDMSTHVSSP 209



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 63/208 (30%), Gaps = 35/208 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-------ATYDDEDILRVYLMDTR 245
           L  ++ DG N   L       +       + ++V                  R  +    
Sbjct: 136 LYRVENDGINFVPLNLGPATHILF----ADGRRVIGRNTFELPHWKGYRGGTRGKIWIEV 191

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              A K+I +  + + +P     G R       D    IYS DL      + T+  F + 
Sbjct: 192 NSGAFKKIVDMSTHVSSPVI--VGHRIYFITDIDGFGQIYSTDLDGKDLRKHTS--FTDY 247

Query: 306 SAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD----------KEASYFDPVW 354
                + D  +I+F         +Y+   +    ++I                S F   +
Sbjct: 248 YPRHLNTDGRRILF----SKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDF 303

Query: 355 SP-QGDLIAFTKFSGEKFAIGVMKKDGS 381
           SP  GDLIAF           +    G+
Sbjct: 304 SPLDGDLIAFVSRG----QAFIQDVSGT 327



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 85/301 (28%), Gaps = 90/301 (29%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM-DTRIDRAPKRIGNFRSMILA----- 262
           S   ++   RF P+ +K+A        +    L      +   KRI  F           
Sbjct: 50  SNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFT 109

Query: 263 --PRFSSNGKRA--------------LISVQKDEAMDIYS-------------------- 286
               F  +G                 L  V+ D    +                      
Sbjct: 110 DVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRN 169

Query: 287 -------------------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                              +++ S A +++ +      S        +I F +D +G  Q
Sbjct: 170 TFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIV--GHRIYFITDIDGFGQ 227

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y    +G D +         Y+    +  G  I F+K      +I +   D  +   + 
Sbjct: 228 IYSTDLDGKDLR--KHTSFTDYYPRHLNTDGRRILFSK----GGSIYIFNPDTEKIEKI- 280

Query: 388 EDSNLQAP-------------TWSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           E  +L++P              +SP  G  + F  +       + +  D++G     +  
Sbjct: 281 EIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSR------GQAFIQDVSGTYVLKVPE 334

Query: 434 P 434
           P
Sbjct: 335 P 335


>gi|328883049|emb|CCA56288.1| putative protease [Streptomyces venezuelae ATCC 10712]
          Length = 1100

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 65/234 (27%), Gaps = 68/234 (29%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+   R+ +  PRFS +G+    +  +    +I+ V ++  +  RLT     +     ++
Sbjct: 43  RLTVDRTRVGHPRFSPDGRHIAYTNWRSLDPEIHLVPIEGGSARRLTYWGSTDTRVCGWT 102

Query: 311 P---DSSQIVFESDREGKEQ-----LYVMQSNGSDQKRISQD------------------ 344
           P   D    +      G+        Y + ++GS   R+                     
Sbjct: 103 PPDKDGRSDILAVSSHGQPFSYFSWAYNVPTDGSPGGRLPWGPVSDIAVTEDCGAGEGER 162

Query: 345 ------KEASYFDPVWS------------------PQ-----------GDLIAFTKFSGE 369
                  +  +    W                   P            G  IAF      
Sbjct: 163 RTLLLTGKPPHEPAAWKRYLGGATGRLWLHGERLLPDIGGHLDCPMAVGGRIAFLSDHEG 222

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +     DG+      +     A   S  GR +++          +L+ +D 
Sbjct: 223 IGNLYSCLPDGTDLLRHTDHDEFYARHASSDGRRVVY------QCAGELWIVDA 270



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 34/98 (34%), Gaps = 8/98 (8%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               RLT          +SPD   I + + R    +++++   G   +R++         
Sbjct: 39  GRAWRLTVDRTRVGHPRFSPDGRHIAYTNWRSLDPEIHLVPIEGGSARRLTYWGSTDTRV 98

Query: 352 PVWSP---QGDL-IAFTKFSGEKFAI----GVMKKDGS 381
             W+P    G   I      G+ F+       +  DGS
Sbjct: 99  CGWTPPDKDGRSDILAVSSHGQPFSYFSWAYNVPTDGS 136



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 70/217 (32%), Gaps = 14/217 (6%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNA-- 293
            +Y +  R   A   +      +  P    +G +       +    +    +   S    
Sbjct: 321 SLYWLTHRDGPARTIVDTPGVRVRLPEMLGSGGQVAYVTDAEGEDAVEVAYLPRASGDRP 380

Query: 294 TERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             RL +            P+  ++   S       L   + +  +   + +       D 
Sbjct: 381 PRRLASGELGRVEELVADPEGERLAIASHDGRLLLLDATEESNGEVTELIRSVNGPVRDL 440

Query: 353 VWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLVEDSN----LQAPTWSPSGRSLIF 406
            +SP G  + ++     +   +I + +  G   R +++ +N     + P ++  GR L F
Sbjct: 441 AFSPDGAWLTWSHPGIGRSLRSIKMARISGPGARTVLDVTNGRFEDENPVFTRDGRYLAF 500

Query: 407 SRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
              +  D    +++ DL+   G    L+   +    P
Sbjct: 501 LSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSP 537



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 6/108 (5%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P  +++A A++D   +L +   +       + I +    +    FS +G     S     
Sbjct: 399 PEGERLAIASHD-GRLLLLDATEESNGEVTELIRSVNGPVRDLAFSPDGAWLTWSHPGIG 457

Query: 281 A--MDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDRE 323
                I    +       +   TN  F + +  ++ D   + F S R 
Sbjct: 458 RSLRSIKMARISGPGARTVLDVTNGRFEDENPVFTRDGRYLAFLSWRG 505



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           G   RL V+ + +  P +SP GR + ++  +  D   +++ + + G +   + 
Sbjct: 39  GRAWRLTVDRTRVGHPRFSPDGRHIAYTNWRSLD--PEIHLVPIEGGSARRLT 89


>gi|319788412|ref|YP_004147887.1| WD40-like beta Propeller containing protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317466924|gb|ADV28656.1| WD40-like beta Propeller containing protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 293

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 38/115 (33%), Gaps = 15/115 (13%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFS---GEKFAIGVMKKDG---SQERLLV--EDSNLQ 393
           +            SP G  +A+            + + ++DG      + L         
Sbjct: 32  TASTRDDELRGSISPDGQWLAWASDREGGPGGMDLWIARRDGIRWVDPQPLPFNTPGPET 91

Query: 394 APTWSPSGRSLIFSRKK-DGDTGSKLYSIDLNG------RNETLINTPAYASDPQ 441
            P +SP GR L F+ ++  G  G  LY +  +G           +NTP     P 
Sbjct: 92  EPAFSPDGRWLYFASRRKGGRGGLDLYRVAFDGQRWGAPEPLAALNTPGDEHSPT 146



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 62/179 (34%), Gaps = 22/179 (12%)

Query: 264 RFSSNGKRALISVQKDEAM---DIYSVDLQSNA---TERLT-NTLFINISASYSPDSSQI 316
             S +G+    +  ++      D++            + L  NT       ++SPD   +
Sbjct: 43  SISPDGQWLAWASDREGGPGGMDLWIARRDGIRWVDPQPLPFNTPGPETEPAFSPDGRWL 102

Query: 317 VFESDREGKEQ---LYVMQSNGS--DQKRISQDKEASYFDPVWSPQGDLIAFT---KFSG 368
            F S R+G      LY +  +G                 +   +P  D + F+     +G
Sbjct: 103 YFASRRKGGRGGLDLYRVAFDGQRWGAPEPLAALNTPGDEHSPTPGHDRLLFSSNGHNAG 162

Query: 369 EKFAI--GVMKKDGSQERL-----LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               +    ++ +GS E       +   ++         GR+L+F+R+      ++LY 
Sbjct: 163 GGLDLFAARIRPEGSVELSGALPGINTTADELDVMELDGGRALLFARRDRATGNARLYL 221



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 49/140 (35%), Gaps = 15/140 (10%)

Query: 181 SESVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI- 236
           +     G     L +  RDG    + + L  +      EP FSP+ + + +A+       
Sbjct: 54  ASDREGGPGGMDLWIARRDGIRWVDPQPLPFNTPGPETEPAFSPDGRWLYFASRRKGGRG 113

Query: 237 ---LRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVD 288
              L     D +   AP+ +   N      +P       R L S         +D+++  
Sbjct: 114 GLDLYRVAFDGQRWGAPEPLAALNTPGDEHSPT--PGHDRLLFSSNGHNAGGGLDLFAAR 171

Query: 289 LQSNATERLTNT-LFINISA 307
           ++   +  L+     IN +A
Sbjct: 172 IRPEGSVELSGALPGINTTA 191



 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 12/62 (19%)

Query: 396 TWSPSGRSLIFSRKK-DGDTGSKLYSIDLNG----RNETLI-------NTPAYASDPQWV 443
           + SP G+ L ++  +  G  G  L+    +G      + L          PA++ D +W+
Sbjct: 43  SISPDGQWLAWASDREGGPGGMDLWIARRDGIRWVDPQPLPFNTPGPETEPAFSPDGRWL 102

Query: 444 GF 445
            F
Sbjct: 103 YF 104


>gi|290511234|ref|ZP_06550603.1| oligogalacturonide lyase [Klebsiella sp. 1_1_55]
 gi|289776227|gb|EFD84226.1| oligogalacturonide lyase [Klebsiella sp. 1_1_55]
          Length = 391

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 86/250 (34%), Gaps = 27/250 (10%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F  +   + +A   D      YL++     A +              S + K 
Sbjct: 36  NYFYQKCFFNDGSHLLFAGEFDGH-WNYYLLNIASAEAIQLTEGAGDNTFGGFLSPDDKS 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTL----------------FINISAS-YSPDSS 314
                     +++    L      R+++                   I I+ S ++P + 
Sbjct: 95  LYYVKNDRTLLEVNLTTLVEREVYRVSDDWVGYGTWVANSDCSKLVGIEIAKSDWTPLND 154

Query: 315 QIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF- 371
             +F           +++ +  S + ++  +++     P++ P     +AF         
Sbjct: 155 WQIFHDFFHKGPHCRLLRVDLHSGESQVIHEEKIWLGHPIYRPFDDHTVAFCHEGPHDLV 214

Query: 372 --AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSID-LNG 425
              + ++ +DGS  R +   +  ++ T   W P G +LI+     G  G  +Y  D  +G
Sbjct: 215 DARMWLVNEDGSHVRKVKTHAPGESCTHEFWVPDGSALIYVSYLKGQQGRTIYRFDPESG 274

Query: 426 RNETLINTPA 435
            NE L+  PA
Sbjct: 275 VNEALMTMPA 284



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 65/190 (34%), Gaps = 38/190 (20%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG+++R + T +  +      + P+   + Y +
Sbjct: 197 PFDDHTVAFCHEGPHDLVDARMWLVNEDGSHVRKVKTHAPGESCTHEFWVPDGSALIYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---------------I 274
           Y      R +Y  D         +       L   F  +G   +                
Sbjct: 257 YLKGQQGRTIYRFDPESGVNEALMTMPACSHLMSNF--DGTLLVGDGSGTPVDVKDTGGY 314

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFES 320
           S+  D    +Y  ++      R+      + S               S++PD S I+F S
Sbjct: 315 SIDND--PYLYVFNVAQKRYFRVARH---DTSWATVANSRQVTHPHPSFTPDDSAILFSS 369

Query: 321 DREGKEQLYV 330
           D++GK  +Y+
Sbjct: 370 DKDGKPAIYI 379



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 70/235 (29%), Gaps = 39/235 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           ++P      +  +  +      L         + I   +  +  P +   +        +
Sbjct: 149 WTPLNDWQIFHDFFHKGPHCRLLRVDLHSGESQVIHEEKIWLGHPIYRPFDDHTVAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ V+   +   ++ T+    +     + PD S +++ S  +G++   +Y 
Sbjct: 209 GPHDLVDARMWLVNEDGSHVRKVKTHAPGESCTHEFWVPDGSALIYVSYLKGQQGRTIYR 268

Query: 331 MQSNGS------------------DQKRISQDKEASYFD----PVWSPQGDLIAFTKFSG 368
                                   D   +  D   +  D      +S   D   +     
Sbjct: 269 FDPESGVNEALMTMPACSHLMSNFDGTLLVGDGSGTPVDVKDTGGYSIDNDPYLYVFNVA 328

Query: 369 EKFAIGVMKKDGS-----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +K    V + D S       R +        P+++P   +++FS  KDG     +
Sbjct: 329 QKRYFRVARHDTSWATVANSRQVTHP----HPSFTPDDSAILFSSDKDGKPAIYI 379



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 37/109 (33%), Gaps = 6/109 (5%)

Query: 288 DLQSNAT-ERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           D  + A   RLT               +  D S ++F  + +G    Y++    ++  ++
Sbjct: 16  DPDTGAEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHWNYYLLNIASAEAIQL 75

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++    + F    SP    + + K       + +      +   + +D 
Sbjct: 76  TEGAGDNTFGGFLSPDDKSLYYVKNDRTLLEVNLTTLVEREVYRVSDDW 124


>gi|283780158|ref|YP_003370913.1| cytochrome C [Pirellula staleyi DSM 6068]
 gi|283438611|gb|ADB17053.1| Planctomycete cytochrome C [Pirellula staleyi DSM 6068]
          Length = 478

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 41/304 (13%), Positives = 88/304 (28%), Gaps = 63/304 (20%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D  +  +        +     +E +++    + + +   DG  +      + + +    F
Sbjct: 144 DADHPPLYQAAPVIRAIEFSPTEDIIAVGGYHEVLLHKADGTGLVGRLVGQSERIESITF 203

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA------- 272
           SP+ + +A           V + D                +    +S +GK         
Sbjct: 204 SPDGKMLAATGGSPGRFGEVQIWDVATRTLKLSHTAGYDTLYGGSWSPDGKMVSFGCPDN 263

Query: 273 ----------------------------------LISVQKDEAMDIYSVDLQS--NATER 296
                                             +ISV +D +M +  V  Q   +    
Sbjct: 264 TIRAIDPATGKEVLFNGAHSDWVLDTIFSTKSDHVISVSRDMSMKLIEVPTQRFIDNITS 323

Query: 297 LTNT------LFINISASYSPDSSQIVFESDREGKEQLYVMQS-------NGSDQKRISQ 343
           +T        + I+   +        +     +G+ Q++ M         + ++  R   
Sbjct: 324 ITPGALKGGLMAIDRHPT-----KDELLCGGSDGRPQVFKMIRTEARKIGDNANLLREFP 378

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSG 401
                 F   +SP G+LIA    S  +  + V       E  +L V +    +  +S  G
Sbjct: 379 ALPGRVFGVAYSPDGNLIAACSSSDGRGEVRVYAAADGAEKWKLAVPEGGQYSVDFSRDG 438

Query: 402 RSLI 405
            +L 
Sbjct: 439 NTLA 442



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/329 (14%), Positives = 94/329 (28%), Gaps = 78/329 (23%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +T  + D  ++  ++++  V     ++L   D D             ++    FSP +  
Sbjct: 115 LTQPEIDTITK--WIAQGAVDDTPASNLPTYDAD----HPPLYQAAPVIRAIEFSPTEDI 168

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A           V L          R+      I +  FS +GK    +          
Sbjct: 169 IA-----VGGYHEVLLHKADGTGLVGRLVGQSERIESITFSPDGKMLAATGGSPGRFGEV 223

Query: 286 SV-DLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            + D+ +   + L++T   +     S+SPD   + F     G     +   + +  K + 
Sbjct: 224 QIWDVATRTLK-LSHTAGYDTLYGGSWSPDGKMVSF-----GCPDNTIRAIDPATGKEVL 277

Query: 343 QDKEASYF--DPVWSPQGDLIAFTKFS--------------------------GEKFAIG 374
            +   S +  D ++S + D +                                G   AI 
Sbjct: 278 FNGAHSDWVLDTIFSTKSDHVISVSRDMSMKLIEVPTQRFIDNITSITPGALKGGLMAID 337

Query: 375 VMKK------DGSQER------LLVE-----------------DSNLQAPTWSPSGRSLI 405
                      GS  R      +  E                    +    +SP G  + 
Sbjct: 338 RHPTKDELLCGGSDGRPQVFKMIRTEARKIGDNANLLREFPALPGRVFGVAYSPDGNLIA 397

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                DG    ++Y+   +G  +  +  P
Sbjct: 398 ACSSSDGRGEVRVYAA-ADGAEKWKLAVP 425



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 11/96 (11%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +SP  D+IA     G    + + K DG+    RL+ +   +++ T+SP G+ L  +    
Sbjct: 162 FSPTEDIIAV----GGYHEVLLHKADGTGLVGRLVGQSERIESITFSPDGKMLAATGGSP 217

Query: 412 GDTG-SKLYSIDLNGRNETLINTPAYAS--DPQWVG 444
           G  G  +++  D+  R   L +T  Y +     W  
Sbjct: 218 GRFGEVQIW--DVATRTLKLSHTAGYDTLYGGSWSP 251



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 42/274 (15%), Positives = 85/274 (31%), Gaps = 62/274 (22%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E   F+     ++ +  S      + + D     ++    +    L+   +SP+ + V++
Sbjct: 199 ESITFSPDGKMLAATGGSPGRFGEVQIWDVATRTLKLSHTAGYDTLYGGSWSPDGKMVSF 258

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
              D+     +  +D    +     G     +L   FS+     +ISV +D +M +  V 
Sbjct: 259 GCPDN----TIRAIDPATGKEVLFNGAHSDWVLDTIFSTKSDH-VISVSRDMSMKLIEVP 313

Query: 289 LQS--NATERLTNT------LFINISAS-------------------------------- 308
            Q   +    +T        + I+   +                                
Sbjct: 314 TQRFIDNITSITPGALKGGLMAIDRHPTKDELLCGGSDGRPQVFKMIRTEARKIGDNANL 373

Query: 309 ---------------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                          YSPD + I   S  +G+ ++ V  +    +K      E   +   
Sbjct: 374 LREFPALPGRVFGVAYSPDGNLIAACSSSDGRGEVRVYAAADGAEKWKLAVPEGGQYSVD 433

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +S  G+ +A   F G+   + V   DGS      
Sbjct: 434 FSRDGNTLAVAGFDGDIRLLKV--ADGSLMTKFT 465


>gi|127511870|ref|YP_001093067.1| transcriptional regulator, CadC [Shewanella loihica PV-4]
 gi|126637165|gb|ABO22808.1| transcriptional regulator, CadC [Shewanella loihica PV-4]
          Length = 696

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 87/266 (32%), Gaps = 13/266 (4%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ---KVAYATYDDEDI 236
           V  ++     + +L V   D       T S  +       S        + ++   DE  
Sbjct: 89  VFNTLPKLGYQLTLTVQPIDSQTTSGPTRSYTRYAAFIAISLITALLLWLTWSEVTDEQP 148

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNA 293
           +++  +    +    ++ N+  +      S +G+R  +  + +     + I  +      
Sbjct: 149 VQLSQLRPVTNPTKLKVTNYGGVEEHIAVSHDGQRLAMQWRDNSLSGKIYIKELSQVDAP 208

Query: 294 TERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              ++       S ++S    ++ +   D  G  Q+ V     +  + I+ D     +  
Sbjct: 209 LTLISFENNEEASPAWSRSDEKLAYVRLDPAGGCQVRVRNLLDNTDQLIASDCFYIPYKR 268

Query: 353 VWSPQG---DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIF 406
           + S  G     + + K   ++ A+     D ++ + +      +   AP W      L F
Sbjct: 269 IVSWSGIDDKRLLYAKKMQDRVALMAYNFDTAEHQQVSFPDKNEIDYAPKWLDQDTQLAF 328

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLIN 432
            R++       L     +G    LI 
Sbjct: 329 IRERAASNLLSLILQTADGSELELIQ 354



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 79/453 (17%), Positives = 162/453 (35%), Gaps = 43/453 (9%)

Query: 4   RFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDEL-- 61
           R +      + I+L   L+L   +   +    V+++      +P  +  T +  ++E   
Sbjct: 117 RSYTRYAAFIAISLITALLLWLTWSEVTDEQPVQLSQLRPVTNPTKLKVTNYGGVEEHIA 176

Query: 62  ----GGKVSEVVSKDLQRSD--VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR 115
               G +++ +  +D   S       +SQ      + + ++        S   + L   R
Sbjct: 177 VSHDGQRLA-MQWRDNSLSGKIYIKELSQVDAPLTLISFENNEEASPAWSRSDEKLAYVR 235

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           +   G  ++RV   L D    + I    F+                 Y+ I    G  + 
Sbjct: 236 LDPAGGCQVRVR-NLLD-NTDQLIASDCFYIP---------------YKRIVSWSGIDDK 278

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDE 234
           R+L+  +       + +L   + D A  + +  P +++I + P++     ++A+      
Sbjct: 279 RLLYAKKM----QDRVALMAYNFDTAEHQQVSFPDKNEIDYAPKWLDQDTQLAFIRERAA 334

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS-VDLQSNA 293
             L   ++ T      + I N  S++    +S+  ++       D A  I S + +  + 
Sbjct: 335 SNLLSLILQTADGSELELIQNSPSIVDF-DYSAR-EQLFYVNNLDGAAAIISRILMDGSQ 392

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDP 352
              L  +  +  S S S D+  +++ ++   KE +      +G   +RIS      Y   
Sbjct: 393 LAPLAQS-GLPSSISLS-DTQAMLYVTEHISKEYITQQAYGDGKQLRRISSSSRDMYGKY 450

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             +  GD I F       ++I    K  S+  +     N+  P  SP      F+     
Sbjct: 451 A-NATGD-ILFLSNRSALWSIWRNNKVSSK-NITHSLGNVGVPAISPVSSD--FAVNIIS 505

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
           DTG  LY  ++   N   I+     +D   W  
Sbjct: 506 DTGRTLYIGNIESENFRAIDIQGIEADNLSWSA 538



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 69/205 (33%), Gaps = 11/205 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+  I          G   +    S        +++     + + +  +   L     + 
Sbjct: 416 VTEHISKEYITQQAYGDGKQLRRISSSSRDMYGKYANATGDILFLS--NRSALWSIWRNN 473

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           ++    K I +    +  P  S       +++  D    +Y  +++S     + +   I 
Sbjct: 474 KVSS--KNITHSLGNVGVPAISPVSSDFAVNIISDTGRTLYIGNIESENFRAI-DIQGIE 530

Query: 305 -ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + S+S D   + F+   + K  +Y +     + ++I Q +     +       + +  
Sbjct: 531 ADNLSWSADGEALYFKGFAKKKNGIYKLNVKSGELEKIPQQQGVYAIEGQ---DANHLYL 587

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE 388
           +KF      I  + +  +Q  L+ +
Sbjct: 588 SKFDQNG--IWHLDRTTNQMTLITD 610


>gi|116195196|ref|XP_001223410.1| hypothetical protein CHGG_04196 [Chaetomium globosum CBS 148.51]
 gi|88180109|gb|EAQ87577.1| hypothetical protein CHGG_04196 [Chaetomium globosum CBS 148.51]
          Length = 716

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 56/162 (34%), Gaps = 9/162 (5%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              ++F P  S  + +  Y       I     +        + +  +  ++    FS +G
Sbjct: 546 GSALVFSPTLSEIRNR--YWKERLPFIEITAGIRDHWGAYRQTLEGYNCLVSIVAFSPDG 603

Query: 270 KRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQL 328
              + S   D  + ++  D+ + A  + L        +  +SPD + +   S     + +
Sbjct: 604 NTLV-SASADTTIRLW--DIATGAYRQTLEGHSLWVTAVVFSPDGNILASASV---DQTI 657

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            +     S  ++  +    S     +SP G+++A +      
Sbjct: 658 RLWDIATSTHRQTLEGHSNSVTTVAFSPDGNILASSGRRYSG 699



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 47/126 (37%), Gaps = 9/126 (7%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R      + ++    FSP+   +  A+ D      + L D       + +      + A 
Sbjct: 584 RQTLEGYNCLVSIVAFSPDGNTLVSASADT----TIRLWDIATGAYRQTLEGHSLWVTAV 639

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDR 322
            FS +G   L S   D+ + ++  D+ ++   + L        + ++SPD + +   S R
Sbjct: 640 VFSPDGN-ILASASVDQTIRLW--DIATSTHRQTLEGHSNSVTTVAFSPDGNILA-SSGR 695

Query: 323 EGKEQL 328
                +
Sbjct: 696 RYSGTI 701



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 8/105 (7%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + +V  S       + +        ++  +         V+SP G+++A     
Sbjct: 598 AFSPDGNTLVSAS---ADTTIRLWDIATGAYRQTLEGHSLWVTAVVFSPDGNILASASVD 654

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKK 410
                I +     S  R  +E  +       +SP G  L  S ++
Sbjct: 655 QT---IRLWDIATSTHRQTLEGHSNSVTTVAFSPDGNILASSGRR 696



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 34/104 (32%), Gaps = 4/104 (3%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++VS     ++ + D      R         +    FSP+   +A A+ D      + L
Sbjct: 604 NTLVSASADTTIRLWDIATGAYRQTLEGHSLWVTAVVFSPDGNILASASVDQ----TIRL 659

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            D       + +    + +    FS +G     S ++      Y
Sbjct: 660 WDIATSTHRQTLEGHSNSVTTVAFSPDGNILASSGRRYSGTIPY 703


>gi|296420840|ref|XP_002839976.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636184|emb|CAZ84167.1| unnamed protein product [Tuber melanosporum]
          Length = 334

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 70/208 (33%), Gaps = 15/208 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             + Y        +   +FSP+   +A  + D      + +   +  +  + +    + I
Sbjct: 31  YALTYTLKGHKMGVSSVKFSPDGAWLASCSADQ----TIKVWHAKTGKYEQTLEGHMAGI 86

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               ++ +    + S   D+ + ++ V +       L        + ++SP  + +   S
Sbjct: 87  SDIDWAPDSLTLV-SGSDDKTLRLWDV-VSGKMLRLLRGHHNAVYTVAFSPRGNIVASGS 144

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G +I      G    I +     
Sbjct: 145 Y---DEAVRLWDIRSGKCMKTLPAHGDPVSGVHFNRDGTMIVSCSHDG---LIRIWDVTT 198

Query: 381 SQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
            Q  R LVE+ N  + A  +SP+G+ L+
Sbjct: 199 GQCLRTLVEEDNAPVMAVKFSPNGKYLL 226



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 28/147 (19%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWDV   K +   +            H   + +Y      +G            V SG
Sbjct: 107 LRLWDVVSGKMLRLLR-----------GHH--NAVYTVAFSPRG----------NIVASG 143

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               ++ + D          P+    +    F+ +   +   ++D      + + D    
Sbjct: 144 SYDEAVRLWDIRSGKCMKTLPAHGDPVSGVHFNRDGTMIVSCSHDG----LIRIWDVTTG 199

Query: 248 RAPKRIGNFRSM-ILAPRFSSNGKRAL 273
           +  + +    +  ++A +FS NGK  L
Sbjct: 200 QCLRTLVEEDNAPVMAVKFSPNGKYLL 226


>gi|298247219|ref|ZP_06971024.1| WD-40 repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297549878|gb|EFH83744.1| WD-40 repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 536

 Score = 60.4 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 89/268 (33%), Gaps = 38/268 (14%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYL-TPSRDQILFEPRFSPNQQKVAYAT 230
           F S         ++    N + + D   G  ++ +  P  ++  +   +SP+ Q +A AT
Sbjct: 185 FQSVAWSNDSQRIASTTDNGVKIWDAATGKTLQAIKLPGENEWAYGVSWSPDSQSLAIAT 244

Query: 231 --------YDDEDILRVYLMDTRIDRAP----KRIGNFRSMILAP----------RFSSN 268
                        ++R Y         P      +G      L P           +S +
Sbjct: 245 NQALRIANSQSGTVVRSYTTSLASTATPGAMSSLVGGSHYSTLFPTSGGLGFRGAAWSPD 304

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIV---FES-- 320
           G    ++V    +  I  V+ Q+   +  T   +  +     ++S D   +    F++  
Sbjct: 305 GHSIAVNVSAGPSGYIQVVNAQTATLDY-TLKWDGSYNGDGLAWSSDGQYLATNIFDAQG 363

Query: 321 -DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKK 378
            D      ++  +   S      Q    +     + P+   +AF  ++      I V   
Sbjct: 364 GDPAKSNFVWAWKLA-SKALVFKQAGGGNPGSLAFQPKTHNLAFNTYTMNAPVLIQVWNI 422

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           + ++   +   S     TWSP G+ L +
Sbjct: 423 ETNKP--VASHSGAYLATWSPDGQQLAY 448



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 64/418 (15%), Positives = 143/418 (34%), Gaps = 63/418 (15%)

Query: 9   EELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEV 68
             L++ + + +L VL+GGFF                     +A ++FV +   G    +V
Sbjct: 122 RSLSLLVAVIILAVLVGGFF---------------------VAQSRFVQLGASGSNNPKV 160

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
            S             + S     T  +++    D   +G Q +      +          
Sbjct: 161 ASS---------PTPKSS----PTGNNAVTIPGD--QMGFQSVAWSNDSQRIASTTDNGV 205

Query: 129 RLWDVKDRKQIIGKKFFSSPA-----SWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           ++WD    K +   K           SW   + +++    Q++        + +   + S
Sbjct: 206 KIWDAATGKTLQAIKLPGENEWAYGVSWSPDSQSLAIATNQALRIANSQSGTVVRSYTTS 265

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDIL--RVY 240
           + S     ++  +   G++   L P+   + F    +SP+   +A             V 
Sbjct: 266 LASTATPGAMSSL-VGGSHYSTLFPTSGGLGFRGAAWSPDGHSIAVNVSAGPSGYIQVVN 324

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---ISVQKDEAMD---IYSVDLQSNAT 294
                +D   K  G++    LA  +SS+G+         Q  +      +++  L S A 
Sbjct: 325 AQTATLDYTLKWDGSYNGDGLA--WSSDGQYLATNIFDAQGGDPAKSNFVWAWKLASKAL 382

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                      S ++ P +  + F +       L  + +  +++   S       +   W
Sbjct: 383 VFKQAGGGNPGSLAFQPKTHNLAFNTYTMNAPVLIQVWNIETNKPVASHSG---AYLATW 439

Query: 355 SPQGDLIAF---TKFSGEKF--AIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLI 405
           SP G  +A+   T+     +   + ++  +  +   + ++  +Q     WSP+G+ ++
Sbjct: 440 SPDGQQLAYNGSTQLGKNSYESNVTIVAANSGKVVHVYKEGAVQIAQLFWSPNGKYML 497


>gi|158333904|ref|YP_001515076.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158304145|gb|ABW25762.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 781

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 9/133 (6%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--E 295
            V L   +  +  K +   ++ +L+  +S +G R + S   D  + I+  D ++     E
Sbjct: 570 SVLLKSIQRVQEIKLLQGHQAAVLSVSYSPDGTRIV-SGSLDNTVRIW--DAKTGQPIGE 626

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVW 354
            L        S SYSPD  +IV  S       + +  +          Q  +   +   +
Sbjct: 627 PLQGHQNTVWSVSYSPDGRRIVSGSS---DNTVRIWDAKTGQAIGEPLQGHQNDVYSVSF 683

Query: 355 SPQGDLIAFTKFS 367
           SP G  I      
Sbjct: 684 SPDGTRIVSGSRD 696



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 55/127 (43%), Gaps = 11/127 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPR 264
           L       +    +SP+  ++   + D+     V + D +  +   + +   ++ + +  
Sbjct: 584 LLQGHQAAVLSVSYSPDGTRIVSGSLDN----TVRIWDAKTGQPIGEPLQGHQNTVWSVS 639

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDR 322
           +S +G+R + S   D  + I+  D ++     E L        S S+SPD ++IV  S R
Sbjct: 640 YSPDGRRIV-SGSSDNTVRIW--DAKTGQAIGEPLQGHQNDVYSVSFSPDGTRIVSGS-R 695

Query: 323 EGKEQLY 329
           +   +++
Sbjct: 696 DKTVRIW 702



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 54/121 (44%), Gaps = 7/121 (5%)

Query: 183 SVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +VSG + N++ + D   G  I          ++   +SP+ +++   + D  + +R++ 
Sbjct: 603 RIVSGSLDNTVRIWDAKTGQPIGEPLQGHQNTVWSVSYSPDGRRIVSGSSD--NTVRIWD 660

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             T      + +   ++ + +  FS +G R + S  +D+ + I+ V  +S    RL    
Sbjct: 661 AKTG-QAIGEPLQGHQNDVYSVSFSPDGTRIV-SGSRDKTVRIWEVGPES--LTRLACDR 716

Query: 302 F 302
           F
Sbjct: 717 F 717



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 13/126 (10%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQG 358
                +S SYSPD ++IV  S       + +  +          Q  + + +   +SP G
Sbjct: 588 HQAAVLSVSYSPDGTRIVSGSL---DNTVRIWDAKTGQPIGEPLQGHQNTVWSVSYSPDG 644

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             I           + +      Q   E L    +++ + ++SP G  ++   +   D  
Sbjct: 645 RRIVSGSSDNT---VRIWDAKTGQAIGEPLQGHQNDVYSVSFSPDGTRIVSGSR---DKT 698

Query: 416 SKLYSI 421
            +++ +
Sbjct: 699 VRIWEV 704



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 26/68 (38%), Gaps = 6/68 (8%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ---ERLLVEDSNLQAPTW 397
           + Q  +A+     +SP G  I           + +      Q   E L    + + + ++
Sbjct: 584 LLQGHQAAVLSVSYSPDGTRIVSGSLDNT---VRIWDAKTGQPIGEPLQGHQNTVWSVSY 640

Query: 398 SPSGRSLI 405
           SP GR ++
Sbjct: 641 SPDGRRIV 648


>gi|149276390|ref|ZP_01882534.1| possible outer membrane protein [Pedobacter sp. BAL39]
 gi|149232910|gb|EDM38285.1| possible outer membrane protein [Pedobacter sp. BAL39]
          Length = 620

 Score = 60.0 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 87/285 (30%), Gaps = 54/285 (18%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMI----LAP 263
           +     + P  + + + + ++   + +    +   D +   AP  + +  +       A 
Sbjct: 156 NSSHRDYFPAITADGETLIFSRNINGNEDFFMSRKDAKGWAAPLPLSDQINTTQFNEGAQ 215

Query: 264 RFSSNGKRALISV----QKDEAMDIYSVDLQS---NATERLT---NTLFINISASYSPDS 313
             + +G+    +           DIY    +         L    N+ F +   + SPD 
Sbjct: 216 SITPDGQYLFFTGCNRPDGLGRCDIYVSHKEGNSWGKPFNLGAPVNSAFWDSQPAISPDG 275

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQD---------KEASYFDPVWSPQGDLIAFT 364
           S + F S+R G    Y +  +  +++    D                P     G  + F+
Sbjct: 276 STLFFVSNRPGGLGGYDIWKSTLNKEGYWADPVNLGPEINTPYDEHTPYLHADGKTLYFS 335

Query: 365 KFSGEKF---AIGVMKKDGSQERLLVEDSNLQAP--------TW--------SPSGRSLI 405
                 F    I         + +L +D +   P        T+        +P G   +
Sbjct: 336 SDGWPGFGNKDIF--------KTVLRDDGHWLHPLNLGYPINTFNEETGLIVTPDGSQAL 387

Query: 406 FSRK-KDGDTGSKLYSIDL--NGRNETLINTPAYASDPQWVGFMD 447
           FS   K G     +Y   L  + R   +        D +   F+D
Sbjct: 388 FSSDLKGGYGDMDIYQFQLPQDKRPLPITYVKGIVRDQESKAFLD 432


>gi|145522318|ref|XP_001447003.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414503|emb|CAK79606.1| unnamed protein product [Paramecium tetraurelia]
          Length = 242

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 53/143 (37%), Gaps = 11/143 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  ++   FSP+   +A  + D      + L D +  +   ++      +++  FS
Sbjct: 36  LDGHSSTVYSVNFSPDGTTLASGSDDK----SIRLWDVKTGQQTAKLDGHSQAVISVNFS 91

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGK 325
            +G     S   D ++ ++  D+++   + +L        S ++SPD + +   S     
Sbjct: 92  PDGTTLA-SGSLDNSIRLW--DVKTGQQKAKLDGHSHYVYSVNFSPDGTTLASGSF---D 145

Query: 326 EQLYVMQSNGSDQKRISQDKEAS 348
             + +       Q   S ++  +
Sbjct: 146 NSIRLWDVKTGQQILSSANRYQN 168



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 10/134 (7%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSP 311
           +    S + +  FS +G     S   D+++ ++  D+++     +L       IS ++SP
Sbjct: 36  LDGHSSTVYSVNFSPDGTTLA-SGSDDKSIRLW--DVKTGQQTAKLDGHSQAVISVNFSP 92

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D + +   S       + +       QK          +   +SP G  +A   F     
Sbjct: 93  DGTTLASGSL---DNSIRLWDVKTGQQKAKLDGHSHYVYSVNFSPDGTTLASGSFDNS-- 147

Query: 372 AIGVMKKDGSQERL 385
            I +      Q+ L
Sbjct: 148 -IRLWDVKTGQQIL 160



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 13/139 (9%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S ++SPD + +   SD    + + +       Q         +     +SP G 
Sbjct: 39  HSSTVYSVNFSPDGTTLASGSD---DKSIRLWDVKTGQQTAKLDGHSQAVISVNFSPDGT 95

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSK 417
            +A          I +      Q++  ++  +    +  +SP G +L       G   + 
Sbjct: 96  TLASGSLDNS---IRLWDVKTGQQKAKLDGHSHYVYSVNFSPDGTTLA-----SGSFDNS 147

Query: 418 LYSIDLNGRNETLINTPAY 436
           +   D+    + L +   Y
Sbjct: 148 IRLWDVKTGQQILSSANRY 166



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 44/146 (30%), Gaps = 27/146 (18%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                       RLWDVK  +Q                 H  S  +        G     
Sbjct: 53  TTLASGSDDKSIRLWDVKTGQQTAKLD-----------GH--SQAVISVNFSPDG----- 94

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 ++ SG + NS+ + D      +         ++   FSP+   +A  ++D+   
Sbjct: 95  -----TTLASGSLDNSIRLWDVKTGQQKAKLDGHSHYVYSVNFSPDGTTLASGSFDN--- 146

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILA 262
             + L D +  +      N    ILA
Sbjct: 147 -SIRLWDVKTGQQILSSANRYQNILA 171


>gi|299135387|ref|ZP_07028577.1| WD40 repeat protein [Afipia sp. 1NLS2]
 gi|298589795|gb|EFI50000.1| WD40 repeat protein [Afipia sp. 1NLS2]
          Length = 430

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 71/217 (32%), Gaps = 21/217 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +     SP+ + +   ++D      V         A + +    S + A  F 
Sbjct: 26  MRGHGGPVRAVAVSPDGRSILSGSFDT----SVIRWSVATGFAEQVLRFHSSAVNAVVFL 81

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           SN + A  S   D  + I++   +S     L+      ++ + SPD S +   S      
Sbjct: 82  SNSRMA--SAGVDAQIAIWTA-GRSKPDTILSGHGAPVVALAVSPDRSMLASAS---WDS 135

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +   +G  + R+ Q    +     ++P G  +      G    + +    G    ++
Sbjct: 136 SVRLWPQDGGSKPRVLQGHSQNVNGVAFTPDGQSLVSV---GYDLTLRIWPLAGGAPEVV 192

Query: 387 VEDSNLQAPTWSPSG--------RSLIFSRKKDGDTG 415
              S L A   +P G          + F  K    TG
Sbjct: 193 TLPSPLNAVAIAPDGGIAVGAADGKIYFLTKGGKRTG 229



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 10/135 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S    +S+ +  +DG +   +     Q +    F+P+ Q +    YD    LR++ +   
Sbjct: 130 SASWDSSVRLWPQDGGSKPRVLQGHSQNVNGVAFTPDGQSLVSVGYDL--TLRIWPL--- 184

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              AP+ +     +  A   + +G  A+     D    IY +      T  +       I
Sbjct: 185 AGGAPEVVTLPSPLN-AVAIAPDGGIAV--GAADG--KIYFLTKGGKRTGEIQAGPTPVI 239

Query: 306 SASYSPDSSQIVFES 320
           S + SPD + +   S
Sbjct: 240 SLAVSPDGASLAAAS 254


>gi|16082452|ref|NP_394941.1| tricorn protease [Thermoplasma acidophilum DSM 1728]
 gi|11387137|sp|P96086|TRI_THEAC RecName: Full=Tricorn protease
 gi|27574089|pdb|1N6D|A Chain A, Tricorn Protease In Complex With Tetrapeptide Chloromethyl
           Ketone Derivative
 gi|27574091|pdb|1N6D|B Chain B, Tricorn Protease In Complex With Tetrapeptide Chloromethyl
           Ketone Derivative
 gi|27574093|pdb|1N6D|C Chain C, Tricorn Protease In Complex With Tetrapeptide Chloromethyl
           Ketone Derivative
 gi|27574095|pdb|1N6D|D Chain D, Tricorn Protease In Complex With Tetrapeptide Chloromethyl
           Ketone Derivative
 gi|27574097|pdb|1N6D|E Chain E, Tricorn Protease In Complex With Tetrapeptide Chloromethyl
           Ketone Derivative
 gi|27574099|pdb|1N6D|F Chain F, Tricorn Protease In Complex With Tetrapeptide Chloromethyl
           Ketone Derivative
 gi|27574101|pdb|1N6E|A Chain A, Tricorn Protease In Complex With A Tridecapeptide
           Chloromethyl Ketone Derivative
 gi|27574103|pdb|1N6E|C Chain C, Tricorn Protease In Complex With A Tridecapeptide
           Chloromethyl Ketone Derivative
 gi|27574105|pdb|1N6E|E Chain E, Tricorn Protease In Complex With A Tridecapeptide
           Chloromethyl Ketone Derivative
 gi|27574107|pdb|1N6E|G Chain G, Tricorn Protease In Complex With A Tridecapeptide
           Chloromethyl Ketone Derivative
 gi|27574109|pdb|1N6E|I Chain I, Tricorn Protease In Complex With A Tridecapeptide
           Chloromethyl Ketone Derivative
 gi|27574111|pdb|1N6E|K Chain K, Tricorn Protease In Complex With A Tridecapeptide
           Chloromethyl Ketone Derivative
 gi|27574113|pdb|1N6F|A Chain A, Tricorn Protease In Complex With Z-Phe-Diketo-Arg-Glu-Phe
 gi|27574114|pdb|1N6F|B Chain B, Tricorn Protease In Complex With Z-Phe-Diketo-Arg-Glu-Phe
 gi|27574115|pdb|1N6F|C Chain C, Tricorn Protease In Complex With Z-Phe-Diketo-Arg-Glu-Phe
 gi|27574116|pdb|1N6F|D Chain D, Tricorn Protease In Complex With Z-Phe-Diketo-Arg-Glu-Phe
 gi|27574117|pdb|1N6F|E Chain E, Tricorn Protease In Complex With Z-Phe-Diketo-Arg-Glu-Phe
 gi|27574118|pdb|1N6F|F Chain F, Tricorn Protease In Complex With Z-Phe-Diketo-Arg-Glu-Phe
 gi|1698847|gb|AAC44621.1| tricorn protease [Thermoplasma acidophilum]
 gi|10640830|emb|CAC12608.1| tricorn protease [Thermoplasma acidophilum]
          Length = 1071

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 85/238 (35%), Gaps = 47/238 (19%)

Query: 221 PN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           P+    ++ +   DD     ++  D +     K + N   +  A RF  +G++  I V +
Sbjct: 46  PDIHGDRIIFVCCDD-----LWEHDLKSGSTRKIVSNLGVINNA-RFFPDGRKIAIRVMR 99

Query: 279 D---EAMDIYSVDLQSNATERLTNTLFINIS-------ASYSPDSSQIV-------FES- 320
                  D+Y  + ++   +R+T     +         A + PD + I+       F S 
Sbjct: 100 GSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSM 159

Query: 321 ---DREGKEQLYVMQSNGSDQKRISQD------KEASYFDPVWSPQGDLIAFTKFSGEKF 371
               R   + +  +  N      I            ++  P W             G + 
Sbjct: 160 TCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHW--------KGYRGGTRG 211

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            I +    G+ ++++   +++ +P     G  + F    DG    ++YS DL+G++  
Sbjct: 212 KIWIEVNSGAFKKIVDMSTHVSSPVIV--GHRIYFITDIDGFG--QIYSTDLDGKDLR 265



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 81/250 (32%), Gaps = 30/250 (12%)

Query: 192 SLCVMDRDGANIRYLTPS-----RDQILFEPR-----FSP-NQQKVAYATYDDEDILRVY 240
           S+ + + D   I  +         D+I+  P      FSP +   +A+ +     I  V 
Sbjct: 292 SIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVS 351

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                    P RI   R          + K A I   ++    +   D ++   E+    
Sbjct: 352 GTYVLKVPEPLRIRYVRRGG-------DTKVAFIHGTREGDF-LGIYDYRTGKAEKFEEN 403

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           L    +     +    V  +DR    ++  +         I + +EA   D   S     
Sbjct: 404 LGNVFAMGVDRNGKFAVVANDR---FEIMTVDLETGKPTVIERSREAMITDFTISDNSRF 460

Query: 361 IAFT----KFSGEKF---AIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           IA+         + +   AI V   +G +      E+S+  AP +    ++L +   +  
Sbjct: 461 IAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSL 520

Query: 413 DTGSKLYSID 422
           D       ++
Sbjct: 521 DPSPDRVVLN 530



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 72/201 (35%), Gaps = 38/201 (18%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +  G R +     D    ++  DL+S +T ++ + L +  +A + PD  +I     R  
Sbjct: 46  PDIHGDRIIFVCCDD----LWEHDLKSGSTRKIVSNLGVINNARFFPDGRKIAIRVMRGS 101

Query: 325 ---KEQLYVMQSNGSDQKRISQDKEASYFDPVWS------PQGDLIA-------FTKFSG 368
                 LY       + KRI+     S    +++      P G+LI        F+  + 
Sbjct: 102 SLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMT- 160

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLY 419
               +  ++ DG     L          ++  GR +I         +   + G  G    
Sbjct: 161 ---CLYRVENDGINFVPLNLGPATHI-LFA-DGRRVIGRNTFELPHWKGYRGGTRGKIWI 215

Query: 420 SIDLNGRNETLINTPAYASDP 440
            ++ +G  + +++   + S P
Sbjct: 216 EVN-SGAFKKIVDMSTHVSSP 235



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 63/208 (30%), Gaps = 35/208 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-------ATYDDEDILRVYLMDTR 245
           L  ++ DG N   L       +       + ++V                  R  +    
Sbjct: 162 LYRVENDGINFVPLNLGPATHILF----ADGRRVIGRNTFELPHWKGYRGGTRGKIWIEV 217

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              A K+I +  + + +P     G R       D    IYS DL      + T+  F + 
Sbjct: 218 NSGAFKKIVDMSTHVSSPVI--VGHRIYFITDIDGFGQIYSTDLDGKDLRKHTS--FTDY 273

Query: 306 SAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD----------KEASYFDPVW 354
                + D  +I+F         +Y+   +    ++I                S F   +
Sbjct: 274 YPRHLNTDGRRILF----SKGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDF 329

Query: 355 SP-QGDLIAFTKFSGEKFAIGVMKKDGS 381
           SP  GDLIAF           +    G+
Sbjct: 330 SPLDGDLIAFVSRG----QAFIQDVSGT 353



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 85/301 (28%), Gaps = 90/301 (29%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM-DTRIDRAPKRIGNFRSMILA----- 262
           S   ++   RF P+ +K+A        +    L      +   KRI  F           
Sbjct: 76  SNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFT 135

Query: 263 --PRFSSNGKRA--------------LISVQKDEAMDIYS-------------------- 286
               F  +G                 L  V+ D    +                      
Sbjct: 136 DVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRN 195

Query: 287 -------------------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                              +++ S A +++ +      S        +I F +D +G  Q
Sbjct: 196 TFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIV--GHRIYFITDIDGFGQ 253

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +Y    +G D +         Y+    +  G  I F+K      +I +   D  +   + 
Sbjct: 254 IYSTDLDGKDLR--KHTSFTDYYPRHLNTDGRRILFSK----GGSIYIFNPDTEKIEKI- 306

Query: 388 EDSNLQAP-------------TWSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           E  +L++P              +SP  G  + F  +       + +  D++G     +  
Sbjct: 307 EIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSR------GQAFIQDVSGTYVLKVPE 360

Query: 434 P 434
           P
Sbjct: 361 P 361


>gi|283781011|ref|YP_003371766.1| WD-40 repeat-containing protein [Pirellula staleyi DSM 6068]
 gi|283439464|gb|ADB17906.1| WD-40 repeat protein [Pirellula staleyi DSM 6068]
          Length = 453

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 52/323 (16%), Positives = 118/323 (36%), Gaps = 47/323 (14%)

Query: 70  SKDLQRSDVFN-LISQDSFKQKITNPDSIPR-----FQDWNSLGAQVLVTGRVIKEGKDR 123
           +KDL+ S+ F  ++SQD  ++   + + +P+     F++W   GA               
Sbjct: 79  AKDLETSESFRRMVSQDKDERMPKDGEPLPKEVIAVFENWIKEGAN-------------- 124

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
                  +D  D K  +   +  +P       H  + + Y           S     SE 
Sbjct: 125 -------FDGPDPKTPLA-SYIPAPT------HPAAPEKYARPIPVTAVALSP--DGSEL 168

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           +V G  + ++     DG  +R +     Q +F    SP+ + +A A+        V +++
Sbjct: 169 LVGGYHEVTVW-SPVDGKLLRRI-GGVGQRVFAITMSPDGKTMAVASGAPGQQGEVRVLE 226

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  + +     ++    +S +G R   +   D  + ++     S+  E+LT +   
Sbjct: 227 IASGNLVRALALSSDVVFDVVYSPSGDRIA-TASADGMIRVFE---TSSGNEQLTISSHS 282

Query: 304 NI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +   + ++S D S++   S R+   + Y   +   +      + +      ++ P G  +
Sbjct: 283 DWVFAVAFSSDGSKLASAS-RDKTAKAY--DAATGNLLITYSNHQNPVRGVLFHPDGSEV 339

Query: 362 AFTKFSGEKFAIGVMKKDGSQER 384
             +    +     +   + + ER
Sbjct: 340 FSSAADNKVQRWKIADANRTGER 362


>gi|127511191|ref|YP_001092388.1| peptidase S9 prolyl oligopeptidase [Shewanella loihica PV-4]
 gi|126636486|gb|ABO22129.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella loihica PV-4]
          Length = 692

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 16/121 (13%)

Query: 258 SMILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSP 311
             +   + S +GK AL    + +        D++ +D +S  T RLT T     S  +SP
Sbjct: 42  GNMGNVQLSPDGKHALWLESRWDKELDKAQKDLWLIDTKSRKTNRLTFTNESESSPQWSP 101

Query: 312 DSSQIVF---ESDRE------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           D S I +   +S  +      GK Q++ +    ++   ++++ E        S  G  + 
Sbjct: 102 DGSAIYYLVKQSREDNKAPYNGKAQVFRINLGSTEAVPVTKEAEG-VKQFQLSQDGKSLY 160

Query: 363 F 363
           F
Sbjct: 161 F 161



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 69/186 (37%), Gaps = 24/186 (12%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQIVFESDREGKE-QL 328
           +   +I   + QS   + L ++ +   + S         +  D+ ++ F  D +G   +L
Sbjct: 241 EGWSNIEVFNTQSQQNKVLEDSAWREQAPSPYGWLLGLAWHEDNQRLAFRIDFDGHPGKL 300

Query: 329 YVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD----G 380
           +V++      K I    E     +  D  W P  D + +  +   +  +   + D    G
Sbjct: 301 FVVKPKDDKAKLIQVKTEGDVTFNSSDIHWRPGSDELCYRGYDHARVKLFCSEIDNQGQG 360

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN---ETLINTPAYA 437
               +L  D  + + +++ +G+ L FS     D  S L+  D   +    + L N     
Sbjct: 361 DTRTVLAGDLVMGSYSFTHNGKKLAFSHN-GLDHFSDLFIADAASKKAKYKRLTNINPQV 419

Query: 438 SDPQWV 443
               W+
Sbjct: 420 D--SWI 423



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 89/286 (31%), Gaps = 64/286 (22%)

Query: 220 SPNQQKVAYATYD-----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ +   +         D+    ++L+DT+  R   R+        +P++S +G     
Sbjct: 50  SPDGKHALWLESRWDKELDKAQKDLWLIDTK-SRKTNRLTFTNESESSPQWSPDGSAIYY 108

Query: 275 SVQK---------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ES 320
            V++         +    ++ ++L S     +T           S D   + F      +
Sbjct: 109 LVKQSREDNKAPYNGKAQVFRINLGSTEAVPVTKEAEGVKQFQLSQDGKSLYFLTNKTTT 168

Query: 321 DRE---------GKEQ----------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           D++         G  +          LY +  +   Q  +  D +  + +   +     I
Sbjct: 169 DKDIWAKVRAKHGAPKYGHGKVTTNPLYKLDLDHYQQSLVLDDDKVVW-NFSVNQDASQI 227

Query: 362 AFTKFSGEKF-------AIGVMKKDGSQERLLVEDSNLQ-APT---------WSPSGRSL 404
           A       +         I V      Q ++L + +  + AP+         W    + L
Sbjct: 228 ARITTQDNELVNLEGWSNIEVFNTQSQQNKVLEDSAWREQAPSPYGWLLGLAWHEDNQRL 287

Query: 405 IFSRKKDGDTGSKLYSIDL--NGRNETLINTPAYA----SDPQWVG 444
            F    DG  G KL+ +    +      + T        SD  W  
Sbjct: 288 AFRIDFDGHPG-KLFVVKPKDDKAKLIQVKTEGDVTFNSSDIHWRP 332



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 34/106 (32%), Gaps = 10/106 (9%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKE---ASYFDPVWSPQGDLIAFTK------FSGEKFAIG 374
           G   L           +I+ D      +  +   SP G    + +          +  + 
Sbjct: 16  GAMGLSSGVLAAERTHQITTDDFFTIGNMGNVQLSPDGKHALWLESRWDKELDKAQKDLW 75

Query: 375 VMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLY 419
           ++     +   L   +  ++ P WSP G ++ +  K+  +     Y
Sbjct: 76  LIDTKSRKTNRLTFTNESESSPQWSPDGSAIYYLVKQSREDNKAPY 121


>gi|324997394|ref|ZP_08118506.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Pseudonocardia sp. P1]
          Length = 670

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 25/183 (13%)

Query: 220 SPNQQKVAYATYDDED--------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +P+   +                 +  +  +D R   AP+ +      + APR S +G  
Sbjct: 140 APDGSWLVAVREHHPSAGCPATDVVNEIVRLDAREPSAPEVVVTGPDFVAAPRISPDGAT 199

Query: 272 ALI-----SVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGK 325
                        + +++   DL S     +      +     + PD S + F SDR G 
Sbjct: 200 LAWLSWDHPSMPWDDVELTVRDLASGVDVVVAGGPGESVTEPQWQPDGS-LTFLSDRTGW 258

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--------LIAFTKFSGEKFAIGVMK 377
             LY        +  +  D E     P W+  G          + F + S    A+ V +
Sbjct: 259 WNLYRWMPGEDIEPLVRTDAE--IGVPGWALGGSRYTLLDDGRVVFARSSHGFDALAVRE 316

Query: 378 KDG 380
            +G
Sbjct: 317 LNG 319



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 14/142 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMIL 261
           +  +    +  PR SP+   +A+ ++D      D + + + D          G     + 
Sbjct: 180 VVVTGPDFVAAPRISPDGATLAWLSWDHPSMPWDDVELTVRDLASGVDVVVAGGPGESVT 239

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS------- 314
            P++  +G        +    ++Y   +     E L  T        ++   S       
Sbjct: 240 EPQWQPDG-SLTFLSDRTGWWNLYR-WMPGEDIEPLVRTDAEIGVPGWALGGSRYTLLDD 297

Query: 315 -QIVFESDREGKEQLYVMQSNG 335
            ++VF     G + L V + NG
Sbjct: 298 GRVVFARSSHGFDALAVRELNG 319


>gi|302819055|ref|XP_002991199.1| hypothetical protein SELMODRAFT_133091 [Selaginella moellendorffii]
 gi|300141027|gb|EFJ07743.1| hypothetical protein SELMODRAFT_133091 [Selaginella moellendorffii]
          Length = 486

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 65/178 (36%), Gaps = 24/178 (13%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM-DRDGANIRYLTPSRDQILFEPRF 219
             ++     KGD   R++       SG    ++ +     G + +       Q++    F
Sbjct: 329 AAFKRYKAAKGDSQERLV-------SGSDDFTMYLWEPATGKHPKTRMSGHQQLVNHVYF 381

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +A A++D      V L +                +    +S++  R L+S  KD
Sbjct: 382 SPDGRWIASASFDK----SVKLWNGYTGEYVTTFRGHVGPVYQISWSAD-SRLLLSGSKD 436

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSN 334
             + ++++       + L +            +SPD  ++       GK+++  +  N
Sbjct: 437 STLKVWNM----RNHKLLEDLPGHADEVFAVDWSPDGQKVA----SGGKDRVLKLWMN 486



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 47/136 (34%), Gaps = 14/136 (10%)

Query: 232 DDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   +YL +    + PK R+   + ++    FS +G+    S   D+++ ++     
Sbjct: 347 SGSDDFTMYLWEPATGKHPKTRMSGHQQLVNHVYFSPDGRWIA-SASFDKSVKLW----N 401

Query: 291 SNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
               E +T     ++      S+S DS  ++  S       L V                
Sbjct: 402 GYTGEYVTTFRG-HVGPVYQISWSADSRLLLSGSK---DSTLKVWNMRNHKLLEDLPGHA 457

Query: 347 ASYFDPVWSPQGDLIA 362
              F   WSP G  +A
Sbjct: 458 DEVFAVDWSPDGQKVA 473



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 38/298 (12%), Positives = 90/298 (30%), Gaps = 66/298 (22%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR------------- 252
                 + +    FSP+ + +A  + D           T +     +             
Sbjct: 99  TISGHSEAVLSVSFSPDSKHLASGSGDASVRFWDISTQTPLHTCKGKMLLTCLVLLHSLF 158

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYS 310
           +   ++ +L   +S +G++ + S  KD  + ++  D  +       L+       + ++ 
Sbjct: 159 LSGHKNWVLCIAWSPDGRKLV-SASKDGGIHVW--DPFTGKALGNSLSGHKSWITALTWE 215

Query: 311 P---------------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           P               D    V++S    ++ +  +  +      +    +   +    S
Sbjct: 216 PAHIQSPCRRFASASKDGDVRVWDS--SLRKSVLCLSGHTRAVTCVKWGGDGLIY--SSS 271

Query: 356 PQGDLIAFTKFSG------EKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSG--RSLIF 406
               +  +    G      +  A  V     S E  L     +    T++     +   F
Sbjct: 272 QDCTIKVWETTQGKLVRELKGHAHWVNTLALSTEYALRTGPFDHTGRTFATDEEIKEAAF 331

Query: 407 SRKK--DGDTGSKLYSID----------LNGR--------NETLINTPAYASDPQWVG 444
            R K   GD+  +L S              G+        ++ L+N   ++ D +W+ 
Sbjct: 332 KRYKAAKGDSQERLVSGSDDFTMYLWEPATGKHPKTRMSGHQQLVNHVYFSPDGRWIA 389



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 47/154 (30%), Gaps = 9/154 (5%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           + +  L+S   D  M ++           R++    +     +SPD   I   S     +
Sbjct: 340 DSQERLVSGSDDFTMYLWE-PATGKHPKTRMSGHQQLVNHVYFSPDGRWIASASF---DK 395

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +      +     +      +   WS    L+  +        +  M+     E L 
Sbjct: 396 SVKLWNGYTGEYVTTFRGHVGPVYQISWSADSRLLL-SGSKDSTLKVWNMRNHKLLEDLP 454

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                + A  WSP G+ +        D   KL+ 
Sbjct: 455 GHADEVFAVDWSPDGQKVA---SGGKDRVLKLWM 485


>gi|37524306|ref|NP_927650.1| hypothetical protein plu0288 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36783729|emb|CAE12583.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 429

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 49/132 (37%), Gaps = 12/132 (9%)

Query: 256 FRSMILAPR----FSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTL-FINISASY 309
           +  ++  PR     S NG++    ++ D   + ++++        ++T +   I  + S+
Sbjct: 300 WPGVVNNPRHWLRVSPNGEQIGFLMKDDNGIVQLWTISPNGGELRQITQSYCGIQSAFSW 359

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFS 367
                 + F  D      + +        +R+++  E   +    V SP    IAF +  
Sbjct: 360 ENSGQFVAFICDNS----VMLCDVQNGQMQRLTKRTEKAPAADAVVISPDSHHIAFMREV 415

Query: 368 GEKFAIGVMKKD 379
                I +++  
Sbjct: 416 DGYMQIFLVETG 427



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 50/139 (35%), Gaps = 18/139 (12%)

Query: 295 ERLT-----NTLFINISAS-Y---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQD 344
            RLT         +  +   +   SP+  QI F   D  G  QL+ +  NG + ++I+Q 
Sbjct: 290 RRLTLTSHKRWPGVVNNPRHWLRVSPNGEQIGFLMKDDNGIVQLWTISPNGGELRQITQS 349

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPS 400
                    W   G  +AF   +    ++ +      Q + L + +       A   SP 
Sbjct: 350 YCGIQSAFSWENSGQFVAFICDN----SVMLCDVQNGQMQRLTKRTEKAPAADAVVISPD 405

Query: 401 GRSLIFSRKKDGDTGSKLY 419
              + F R+ DG     L 
Sbjct: 406 SHHIAFMREVDGYMQIFLV 424



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 36/96 (37%), Gaps = 3/96 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +  +G  +R +T S   I     +  + Q VA+    D  ++   + + ++ R  K
Sbjct: 332 QLWTISPNGGELRQITQSYCGIQSAFSWENSGQFVAF--ICDNSVMLCDVQNGQMQRLTK 389

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           R     +   A   S +        + D  M I+ V
Sbjct: 390 RTEKAPAAD-AVVISPDSHHIAFMREVDGYMQIFLV 424


>gi|302546321|ref|ZP_07298663.1| putative serine/threonine protein kinase [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302463939|gb|EFL27032.1| putative serine/threonine protein kinase [Streptomyces
           himastatinicus ATCC 53653]
          Length = 694

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 74/238 (31%), Gaps = 28/238 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRALIS 275
            FSP+ + +A  + + +  L             +R   GN    I    FS NGK    +
Sbjct: 394 AFSPDGKTLATGSDEGKVRLWDVARRKPKATFTQRDGAGNDGFEIRDVAFSPNGKLLA-A 452

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                 + ++ V        ++        S ++SPD        D      L+ +   G
Sbjct: 453 TNMTGWVTLWDV----AEHRQIRFLYSEGESVAFSPDGKLFA-TGDESKSVHLWDINGRG 507

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-----KFAIGVMKKDGSQER------ 384
            +         A   D  +SP G  +A              A  +    G          
Sbjct: 508 DEA-LAYFSPNAPVKDVAFSPDGRTLASAGDDSGSNLTPNHAALLWDVAGRDPEPYGQDD 566

Query: 385 ---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
               L     +Q+  +SP G++L       G T   +   D+  R  T I +  Y ++
Sbjct: 567 PRATLSTPQGVQSVAFSPDGKTLA-----TGGTDYDVRLWDVATRRRTAILSDYYQAE 619



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 85/268 (31%), Gaps = 34/268 (12%)

Query: 128 FRLWDVK---DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           F + DV    + K +           W    H     +Y    GE   F+      +   
Sbjct: 436 FEIRDVAFSPNGKLLAATNMTGWVTLWDVAEHRQIRFLYSE--GESVAFSPDGKLFA--- 490

Query: 185 VSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +G    S+ + D +G  +      S +  + +  FSP+ + +A A  D    L      
Sbjct: 491 -TGDESKSVHLWDINGRGDEALAYFSPNAPVKDVAFSPDGRTLASAGDDSGSNLTPNHAA 549

Query: 244 TRID-----------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
              D             P+   +    + +  FS +GK            D+   D+ + 
Sbjct: 550 LLWDVAGRDPEPYGQDDPRATLSTPQGVQSVAFSPDGKTLA---TGGTDYDVRLWDVATR 606

Query: 293 ATER-LTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKE 346
                L++     +   ++SPD   +       G   L +        + I    SQ+ +
Sbjct: 607 RRTAILSDYYQAEVEDLAFSPDGKTLA----VPGGNGLLLWNVASRKPRAILTTGSQEAD 662

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +  D  +SP G  +A  + +     + 
Sbjct: 663 NTIHDVAFSPDGRFVAGHEGTARTVRLW 690



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 52/315 (16%), Positives = 99/315 (31%), Gaps = 58/315 (18%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G D  +V  RLWDV  RK            +                    G  
Sbjct: 399 GKTLATGSDEGKV--RLWDVARRKPKATFTQRDGAGN-------------------DGFE 437

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
              + F     +      +  V   D A  R +     +      FSP+ +   +AT D+
Sbjct: 438 IRDVAFSPNGKLLAATNMTGWVTLWDVAEHRQIRFLYSEGESV-AFSPDGK--LFATGDE 494

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-----AMDIYSVD 288
              + ++ ++ R D A     +  + +    FS +G+    +                 D
Sbjct: 495 SKSVHLWDINGRGDEALA-YFSPNAPVKDVAFSPDGRTLASAGDDSGSNLTPNHAALLWD 553

Query: 289 LQSNATER---------LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +     E          L+    +  S ++SPD   +       G     V   + + ++
Sbjct: 554 VAGRDPEPYGQDDPRATLSTPQGVQ-SVAFSPDGKTLA-----TGGTDYDVRLWDVATRR 607

Query: 340 R---ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-- 394
           R   +S   +A   D  +SP G  +A          + +      + R ++   + +A  
Sbjct: 608 RTAILSDYYQAEVEDLAFSPDGKTLAV----PGGNGLLLWNVASRKPRAILTTGSQEADN 663

Query: 395 ----PTWSPSGRSLI 405
                 +SP GR + 
Sbjct: 664 TIHDVAFSPDGRFVA 678


>gi|271963748|ref|YP_003337944.1| peptidase S9, prolyl oligopeptidase active site region
           [Streptosporangium roseum DSM 43021]
 gi|270506923|gb|ACZ85201.1| peptidase S9, prolyl oligopeptidase active site region
           [Streptosporangium roseum DSM 43021]
          Length = 626

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 88/330 (26%), Gaps = 50/330 (15%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           IAH  +D  ++ +        +R+        + +    +   +     +  L P  +  
Sbjct: 54  IAHRAADGTHRELLSAPWSARTRVHEYGGRSYAVVPGGGVVFANLADQRLYLLPPCAEPR 113

Query: 214 LFEPRFSPN---QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR------------S 258
              PR  P+     + A     D  +  V           + I +               
Sbjct: 114 PITPR--PDRESGLRYADMIVHDGQVWCVQERHHDGGGISRSIVSVPLDGGDVPRERVGG 171

Query: 259 MILAP--RFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINIS-------- 306
                    S +G+            D   +          RL +     +         
Sbjct: 172 SDFYACLALSPDGEHLAYIC-----WDHPRMPWNGTELRITRLADGTSWTVGGGPSESVL 226

Query: 307 -ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS---------P 356
              +  D   +   SDR G   LY +  +G+  + +   +E  +  P+W           
Sbjct: 227 APQW-RDDRHLYLVSDRSGWWNLYQIGIDGTSPRALHPVEE-EFAGPLWQLGGPPYRVLA 284

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  IA     G+   +GV+  D      L    +      +  GR L            
Sbjct: 285 DGR-IAVLHGRGD-MRLGVLDPDSGVLTDLDVPYDGWEQVLASDGRVLA-GIGYSATVPR 341

Query: 417 KLYSID-LNGRNETLINTPAYASDPQWVGF 445
            +  +D   GR E L        D  ++  
Sbjct: 342 SIVRVDTATGRAEELRRDVDELPDLAYLPL 371


>gi|83645376|ref|YP_433811.1| hypothetical protein HCH_02594 [Hahella chejuensis KCTC 2396]
 gi|83633419|gb|ABC29386.1| conserved hypothetical protein [Hahella chejuensis KCTC 2396]
          Length = 901

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 69/180 (38%), Gaps = 41/180 (22%)

Query: 265 FSSNGKRALISVQKD----------EAMDIYSVDLQSNATERLTNT-----LFINISASY 309
            SS+G + + +++               +I+  D+ S + ER+  +        +I   Y
Sbjct: 128 VSSDGSKIVFAMRAPVIEDADEDEQPTWNIWEYDVASRSLERVIASDNVAEAGHDIGPHY 187

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSG 368
            PD  +IVF S R+ + Q  ++       + +++D+        V SP  D I       
Sbjct: 188 LPDG-RIVFASTRQRQSQAILLDEGKPQFEALNEDRRDPALALHVISPDTDEI------- 239

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR--KKDGDTGSKLYSIDLNGR 426
                          ++    S+   P  + +G+ ++F+R     G+    LY ++ +G 
Sbjct: 240 --------------TQITFNQSSDLDPFVAQNGK-IVFTRWDNMGGNNSMNLYQVNPDGT 284



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 74/233 (31%), Gaps = 52/233 (22%)

Query: 220 SPNQQKVAYATY---------DDEDILRVYLMDTRIDRAPKRIGNFR----SMILAPRFS 266
           S +  K+ +A           D++    ++  D       + I +         + P + 
Sbjct: 129 SSDGSKIVFAMRAPVIEDADEDEQPTWNIWEYDVASRSLERVIASDNVAEAGHDIGPHYL 188

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G R + +  +        +D                    +   +        R+   
Sbjct: 189 PDG-RIVFASTRQRQSQAILLD---------------EGKPQFEALNEDR-----RDPAL 227

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----GEKFAIGVMKKDGSQ 382
            L+V+  +  +  +I+ + ++S  DP  +  G  I FT++          +  +  DG+ 
Sbjct: 228 ALHVISPDTDEITQITFN-QSSDLDPFVAQNGK-IVFTRWDNMGGNNSMNLYQVNPDGTG 285

Query: 383 ERLLV------EDSNLQAPTWS-P----SGR-SLIFSRKKDGDTGSKLYSIDL 423
              L         S+ +A  +  P     GR  +     +    G  L +ID+
Sbjct: 286 LEYLYGRHSHDTGSSNEAVQFLKPVELEDGRIMVSLRPYQSSRYGGALVAIDV 338


>gi|306815958|ref|ZP_07450096.1| hypothetical protein ECNC101_05079 [Escherichia coli NC101]
 gi|305850354|gb|EFM50811.1| hypothetical protein ECNC101_05079 [Escherichia coli NC101]
          Length = 404

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT T        +NI   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRIYPGLVNIPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +          +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWMED------GQLWITETD 403



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 12/177 (6%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL-FEPRFS 220
           I +    E G   +  + +S +  +        V  R       + P    I     R +
Sbjct: 235 IVELPKDEAGWKAAGDVPLSGTETTLPAPPRGVVQRRLTFTHHRIYPGLVNIPRHWVRCN 294

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     +    
Sbjct: 295 PQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
              I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 353 --RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 403


>gi|145528919|ref|XP_001450250.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417857|emb|CAK82853.1| unnamed protein product [Paramecium tetraurelia]
          Length = 270

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 68/165 (41%), Gaps = 25/165 (15%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +Y+ + +  ++  ++    + + +  FS +G +   S   D ++ I+  D+++   +   
Sbjct: 124 LYIWNHKTGKSISKLIGHTNKVYSVCFSPDGTKL-PSSSSDTSIRIW--DVKTGKEKVKL 180

Query: 299 NTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           N   IN  S  +SPDS+ +V  SD                  +I    +   F    SP 
Sbjct: 181 NGHKINIYSVCFSPDSTTLV--SD------------------QIRWSYQLCLFSLFLSPD 220

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           G  +A +  S +   +  ++    +  L V +S + +  +SP G 
Sbjct: 221 GKTLA-SSSSDKSIRLWNVQTGLQKATLNVHNSTVSSVCFSPDGT 264



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 50/168 (29%), Gaps = 26/168 (15%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L + +                ++   FSP+  K+  ++ D      + + D +  +   +
Sbjct: 124 LYIWNHKTGKSISKLIGHTNKVYSVCFSPDGTKLPSSSSDT----SIRIWDVKTGKEKVK 179

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +   +  I +  FS +    + S Q   +  +    L                    SPD
Sbjct: 180 LNGHKINIYSVCFSPDSTTLV-SDQIRWSYQLCLFSL------------------FLSPD 220

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              +   S     + + +       QK       ++     +SP G L
Sbjct: 221 GKTLASSSS---DKSIRLWNVQTGLQKATLNVHNSTVSSVCFSPDGTL 265


>gi|108762084|ref|YP_630642.1| hypothetical protein MXAN_2422 [Myxococcus xanthus DK 1622]
 gi|108465964|gb|ABF91149.1| hypothetical protein MXAN_2422 [Myxococcus xanthus DK 1622]
          Length = 1225

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 82/241 (34%), Gaps = 14/241 (5%)

Query: 139 IIGKKFFSSPASWRKIAHTIS-DDIY-QSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           I G+ F  +      IA     D IY Q  T +     + +L    ++ +GI +    V+
Sbjct: 552 ISGRSFALTNDKLAFIAEITGRDVIYVQDYTHKSERRGADVLVRRNAIRTGIDREVGLVV 611

Query: 197 DR--DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT--RIDRAPKR 252
           D    G     +        + P FSP+ + VA+   +D  +  +Y +D     D  P +
Sbjct: 612 DLSLGGRTAYRIDRHGLLAAYSPAFSPDGRWVAFIGINDAGLRDIYAIDLQAGPDAPPLQ 671

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASY 309
           + +         +  +G   + +                      ERLT+    + +   
Sbjct: 672 LTDDVFSEREVTWGPSG--IVFTSDATSHRQFNLFRVRPDAPRQVERLTSEERDHTAPVA 729

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D     F +       L+ +  +G   +R   D     F+P   P G L      SGE
Sbjct: 730 LADGRLF-FTAFNNSSSDLHELTKDGRIVRR--TDLTTGVFEPGPGPDGSLWMLFHVSGE 786

Query: 370 K 370
           +
Sbjct: 787 R 787



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 69/234 (29%), Gaps = 30/234 (12%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA--LISVQKDEAMDIY 285
           +  +      + YL   +   A   +        A   S +G        V +     +Y
Sbjct: 466 FENWLKRRAFKTYLASEQSAPALDLLDKAPGYTTAMASSPSGNVLGLRTIVPETGESRLY 525

Query: 286 SVDLQSNATERLTNTLFINISASYSP--------DSSQIVFESDREGKEQLYVMQSNGSD 337
            +D +            +    S  P         + ++ F ++  G++ +YV       
Sbjct: 526 IMDPRVPDKTVKVAGDGVPGVESLHPISGRSFALTNDKLAFIAEITGRDVIYVQDYTHKS 585

Query: 338 QKR---ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           ++R   +   + A           ++      S        + + G    LL       +
Sbjct: 586 ERRGADVLVRRNAIRTGI----DREVGLVVDLSLGGRTAYRIDRHG----LLAA----YS 633

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDL----NGRNETLINTPAYASDPQWVG 444
           P +SP GR + F    D      +Y+IDL    +     L +      +  W  
Sbjct: 634 PAFSPDGRWVAFIGINDAGL-RDIYAIDLQAGPDAPPLQLTDDVFSEREVTWGP 686


>gi|320587676|gb|EFX00151.1| nacht domain containing protein [Grosmannia clavigera kw1407]
          Length = 1017

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 91/306 (29%), Gaps = 34/306 (11%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    ++WDV  R+ +   +                          +G   S    
Sbjct: 711 ASGSYDGTVKIWDVPSRRTVCTLRKHDGA--------------------IRGVAFSHDSL 750

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  S  S     ++ + D             +  +    F    ++ A+      D   V
Sbjct: 751 LMASGSSDQ---TIRLWDAATGRCIQSLVGHNHDVMSVAFM---RESAFVVSGSRDC-SV 803

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D    +  + +      + +   S +  R + S  +D ++  +   +    T  L  
Sbjct: 804 RIWDLATGQCHQTLEGHTRDVQSVAVSHD-SRIIASASRDYSVRFWD-PVSGQCTRTLKA 861

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S  +S DS ++   + R+    + +      +     +          +S    
Sbjct: 862 HDDYVWSVVFSHDSGRVA-TASRDHS--IKIWHVATGECLHTLEGHSHEVGLLAFSHDSR 918

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           L+A +  +     +         E L    + +++ T+SP  + L+ S   DG       
Sbjct: 919 LLA-SPSNDLTVKLWDTAIGYCVETLQGHTAIVESVTFSPDSKLLV-SGSHDGTIKLWKA 976

Query: 420 SIDLNG 425
           S+ LNG
Sbjct: 977 SVGLNG 982


>gi|281417346|ref|ZP_06248366.1| serine/threonine protein kinase [Clostridium thermocellum JW20]
 gi|281408748|gb|EFB39006.1| serine/threonine protein kinase [Clostridium thermocellum JW20]
          Length = 695

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 73/183 (39%), Gaps = 23/183 (12%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G     +   +   +I+ +DL+ N   RL      +     +     I + ++ +G  +L
Sbjct: 456 GNWIYYT-DPNNDDNIFRIDLEGNGKTRLNTDRSWD----ITVCGEWIYYINESDG-YKL 509

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y ++++G+++ +++ D   S F        D + ++  S     I  +   G     +V 
Sbjct: 510 YKIKTDGTERTKLNNDFTQSLFLKD-----DWLYYSNKSDGG-KIYKINTLGKGRTRIVN 563

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT----PAYASDPQWVG 444
           D       +   G  + +  K DG    KLY   ++GR++  +N         S+  W+ 
Sbjct: 564 DEASYINVY---GDYIFYCNKSDG---FKLYRASIDGRSKNKLNDDISYNINVSNG-WIY 616

Query: 445 FMD 447
           + +
Sbjct: 617 YCN 619



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 19/159 (11%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +S+           +L  N +  + N   +    S+       ++ S+      +Y ++ 
Sbjct: 384 VSIFGSLLRREMVYNLMGNHSGNILNGGLVCTQGSW-------LYFSNAGCDFNIYKVKL 436

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +GSD +RI+ D+            G+ I +T  + +   I  +  +G+ +  L  D +  
Sbjct: 437 DGSDLQRINNDESWFLNVC-----GNWIYYTDPNNDD-NIFRIDLEGNGKTRLNTDRSWD 490

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                  G  + +  + DG    KLY I  +G   T +N
Sbjct: 491 ITV---CGEWIYYINESDG---YKLYKIKTDGTERTKLN 523



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 16/96 (16%)

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTG 415
           G  + F   +G  F I  +K DGS  + +  D      +W  +  G  + ++   D +  
Sbjct: 417 GSWLYF-SNAGCDFNIYKVKLDGSDLQRINNDE-----SWFLNVCGNWIYYT---DPNND 467

Query: 416 SKLYSIDLNGRNETLINTPAYASD----PQWVGFMD 447
             ++ IDL G  +T +NT   + D     +W+ +++
Sbjct: 468 DNIFRIDLEGNGKTRLNTD-RSWDITVCGEWIYYIN 502


>gi|112982984|ref|NP_001037087.1| will die slowly [Bombyx mori]
 gi|40949819|gb|AAR97571.1| will die slowly [Bombyx mori]
          Length = 346

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 81/224 (36%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      +     +FSP+ + +A ++ D      + +      +  K I   +  I
Sbjct: 47  YTLKFTLAGHTKAATSVKFSPSGKWLASSSADK----LIKIWGAYDGKFEKTISGHKMGI 102

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R ++S   D+ + ++ +       + L          +++P S+ IV  S
Sbjct: 103 SDVAWSSD-SRLIVSASDDKTLKVWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 160

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 161 F---DESVRIWDVRTGKCLKPLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 215

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 216 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 256


>gi|125973152|ref|YP_001037062.1| serine/threonine protein kinase [Clostridium thermocellum ATCC
           27405]
 gi|256003949|ref|ZP_05428935.1| serine/threonine protein kinase [Clostridium thermocellum DSM 2360]
 gi|125713377|gb|ABN51869.1| serine/threonine protein kinase [Clostridium thermocellum ATCC
           27405]
 gi|255992077|gb|EEU02173.1| serine/threonine protein kinase [Clostridium thermocellum DSM 2360]
 gi|316940620|gb|ADU74654.1| serine/threonine protein kinase [Clostridium thermocellum DSM 1313]
          Length = 695

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 73/183 (39%), Gaps = 23/183 (12%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G     +   +   +I+ +DL+ N   RL      +     +     I + ++ +G  +L
Sbjct: 456 GNWIYYT-DPNNDDNIFRIDLEGNGKTRLNTDRSWD----ITVCGEWIYYINESDG-YKL 509

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y ++++G+++ +++ D   S F        D + ++  S     I  +   G     +V 
Sbjct: 510 YKIKTDGTERTKLNNDFTQSLFLKD-----DWLYYSNKSDGG-KIYKINTLGKGRTRIVN 563

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT----PAYASDPQWVG 444
           D       +   G  + +  K DG    KLY   ++GR++  +N         S+  W+ 
Sbjct: 564 DEASYINVY---GDYIFYCNKSDG---FKLYRASIDGRSKNKLNDDISYNINVSNG-WIY 616

Query: 445 FMD 447
           + +
Sbjct: 617 YCN 619



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 19/159 (11%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +S+           +L  N +  + N   +    S+       ++ S+      +Y ++ 
Sbjct: 384 VSIFGSLLRREMVYNLTGNHSGNILNGGLVCTQGSW-------LYFSNAGCDFNIYKVKL 436

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +GSD +RI+ D+            G+ I +T  + +   I  +  +G+ +  L  D +  
Sbjct: 437 DGSDLQRINNDESWFLNVC-----GNWIYYTDPNNDD-NIFRIDLEGNGKTRLNTDRSWD 490

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                  G  + +  + DG    KLY I  +G   T +N
Sbjct: 491 ITV---CGEWIYYINESDG---YKLYKIKTDGTERTKLN 523



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 43/96 (44%), Gaps = 16/96 (16%)

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTG 415
           G  + F   +G  F I  +K DGS  + +  D      +W  +  G  + ++   D +  
Sbjct: 417 GSWLYF-SNAGCDFNIYKVKLDGSDLQRINNDE-----SWFLNVCGNWIYYT---DPNND 467

Query: 416 SKLYSIDLNGRNETLINTPAYASD----PQWVGFMD 447
             ++ IDL G  +T +NT   + D     +W+ +++
Sbjct: 468 DNIFRIDLEGNGKTRLNTD-RSWDITVCGEWIYYIN 502


>gi|195152906|ref|XP_002017377.1| GL21559 [Drosophila persimilis]
 gi|194112434|gb|EDW34477.1| GL21559 [Drosophila persimilis]
          Length = 413

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 44/242 (18%), Positives = 76/242 (31%), Gaps = 54/242 (22%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  + + RFSP   ++A ++ D      V L + +      R G+  S +    +S
Sbjct: 14  FTGHSGSITQLRFSPEGSQIATSSLDG----SVILWNLKQASRCIRFGSHSSAVYGVAWS 69

Query: 267 SNGKRALISVQKDEAMDIY-------------------SVDLQSNATERLTNTLF----- 302
             G     S   D ++ I+                   S+D        LT +       
Sbjct: 70  PKGNLVA-SAGHDRSVKIWEPKVRGVSGEFAAHSKPVRSIDFDPTGQMMLTASDDKSVKI 128

Query: 303 -----------------INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                               +A +SP+   I   SD    + L +   N  +  R   +K
Sbjct: 129 WRVAKRQFLSSFSQQTNWVRAAKFSPNGKMIATVSD---DKSLRIYDVNTGECTRTITEK 185

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRS 403
             +     W P G+++A          I +    GSQ   L  V  + +    + PSG  
Sbjct: 186 RGAPRQVAWHPWGNMVAVALGCN---RIKIFDVGGSQLLQLYVVHSAPVNDVAFHPSGNF 242

Query: 404 LI 405
           L+
Sbjct: 243 LL 244



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 70/202 (34%), Gaps = 25/202 (12%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +        I   RFS  G +   +   D ++ ++++   S    R  +        ++S
Sbjct: 12  RHFTGHSGSITQLRFSPEGSQIA-TSSLDGSVILWNLKQASRCI-RFGSHSSAVYGVAWS 69

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS----PQGDLIAFTKF 366
           P  + +   +  +   +++        + R    + A++  PV S    P G  +  T  
Sbjct: 70  PKGNLVA-SAGHDRSVKIW------EPKVRGVSGEFAAHSKPVRSIDFDPTGQ-MMLTAS 121

Query: 367 SGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +   I  +    ++ + L     + + ++A  +SP+G+ +        D   ++Y ++
Sbjct: 122 DDKSVKIWRV----AKRQFLSSFSQQTNWVRAAKFSPNGKMIATVSD---DKSLRIYDVN 174

Query: 423 LNGRNETLINTPAYASDPQWVG 444
                 T+           W  
Sbjct: 175 TGECTRTITEKRGAPRQVAWHP 196


>gi|317157848|ref|XP_001826610.2| WD-repeat protein [Aspergillus oryzae RIB40]
          Length = 1269

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 17/190 (8%)

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            E I    L D       + +     M+    FS +    L S   D  + ++  D +S  
Sbjct: 1003 ESITGRKLRDKSWSAQLQTLKGHSGMVNTVVFSPD-SEILASGSGDGTIQLW--DAKSGK 1059

Query: 294  TERLTNT-LFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              ++ ++ L    +  +SPDS  +V  S DR     +++      +Q +IS+      ++
Sbjct: 1060 QLQIFDSCLGWVNTMVFSPDSEVLVLSSLDRT----IWLWDIKSREQLQISKGYLDYTYN 1115

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRK 409
              +S   +++A     G    I +      +    ++          +S   + L     
Sbjct: 1116 LAFSLDSEILALGSGDGT---IQLWDTKSREPLQTLDSYLDWVNTMAFSLDSKILALGSD 1172

Query: 410  KDGDTGSKLY 419
               D   +L+
Sbjct: 1173 ---DKTVQLW 1179



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 94/257 (36%), Gaps = 44/257 (17%)

Query: 108  AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
            +++L +G     G   +    +LWD K  KQ+                      I+ S  
Sbjct: 1038 SEILASGS----GDGTI----QLWDAKSGKQL---------------------QIFDSCL 1068

Query: 168  GEKGDFNSRILFVSESVVS--GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            G    + + ++F  +S V     +  ++ + D        ++       +   FS + + 
Sbjct: 1069 G----WVNTMVFSPDSEVLVLSSLDRTIWLWDIKSREQLQISKGYLDYTYNLAFSLDSEI 1124

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +A  + D      + L DT+     + + ++   +    FS + K   +    D+ + ++
Sbjct: 1125 LALGSGDG----TIQLWDTKSREPLQTLDSYLDWVNTMAFSLDSKILAL-GSDDKTVQLW 1179

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                +    + L   L    + ++SPDS  +   S   G + + +  +    Q +I +  
Sbjct: 1180 CTKSR-KQLQILEGHLARVNTVAFSPDSKILASGS---GDKTVRLWCTKSGKQLQILEGH 1235

Query: 346  EASYFDPVWSPQGDLIA 362
                    +SP G+++A
Sbjct: 1236 LDWVRAVTFSPDGEILA 1252


>gi|168042307|ref|XP_001773630.1| WD40 repeat protein, COMPASS complex protein [Physcomitrella patens
           subsp. patens]
 gi|162675018|gb|EDQ61518.1| WD40 repeat protein, COMPASS complex protein [Physcomitrella patens
           subsp. patens]
          Length = 309

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 46/297 (15%), Positives = 98/297 (32%), Gaps = 35/297 (11%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           GK + +         H  +    +     K   +S          S      +     DG
Sbjct: 5   GKSYVAYKHKITLAGHRKAISSVKFSPDGKWVGSS----------SADKTTRIWSAT-DG 53

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              R L    D I     +S + + +  A+ D      + + D +     K +    + +
Sbjct: 54  KCERVLEGHSDGISDF-AWSSDSRYICSASDDK----TLKIWDLQTGDCVKTLRGHTNFV 108

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               F+      ++S   DE + ++  D+++    + L        +  ++ D S IV  
Sbjct: 109 FCVNFNPQ-SSVIVSGSFDETVRLW--DVKTGKCLKTLLAHSDPVTAVDFNRDGSLIV-T 164

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S  +G  +++   ++G   K +  DK  +     +SP G  I           + +    
Sbjct: 165 SSYDGLCKIWD-NTSGDCVKTLIDDKNPTVSFVKFSPNGKFILAGTLDN---NLRLWNYA 220

Query: 380 GSQ-ERLLVEDSNLQAPTWS----PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            S+  R      N +   ++     +G+ ++      G   + +Y  DL  +N    
Sbjct: 221 TSKCLRTYTGHKNDKFCVFATFSVTNGKYIV-----SGSEDNCVYLWDLQAQNIIQT 272


>gi|309779366|ref|ZP_07674128.1| signal peptide protein [Ralstonia sp. 5_7_47FAA]
 gi|308921924|gb|EFP67559.1| signal peptide protein [Ralstonia sp. 5_7_47FAA]
          Length = 468

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 88/266 (33%), Gaps = 21/266 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYD 232
           +  L     V  G   + + + D     ++ ++ +   I       FSP+ + +A+    
Sbjct: 40  TGKLAYHSYVSYGDGTSQIFIYDFSARTLQQVSKAAWGIQDPMNAVFSPDGKWIAFMGIT 99

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           + +   V+         P  + N         P+FS++GK        D      S    
Sbjct: 100 N-NAWNVFFWQVGSTSMPINLTNSTGQTRNEDPKFSTDGKSLFFKQNGDVMQAALSYTSS 158

Query: 291 S---NATERLTNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                +T  LT T     N     +PD + + + +       LY      + +       
Sbjct: 159 GPVFTSTVNLTRTAPTLENSMPFATPDGTAVFYTTGTGSGMGLYKQTVGSTAKVAFDTPA 218

Query: 346 EASYFDPVWSPQGDLIA--FTKFSGEKFAIGV-MKKDGSQERLLVED--SNLQAPTWSP- 399
             + + P+    G +    +   + +   I   +    +  +L + D  SN   P  SP 
Sbjct: 219 GLATYYPIVRADGTVFYARWHDATSQADQIYTKVNPSDTPNQLALNDCNSNNSDP--SPV 276

Query: 400 -SGRSLIFSRKKDGDTGSKLYSIDLN 424
            +   + FS    G  G +LY  D +
Sbjct: 277 NNTNYVFFSSTSAG--GYQLYLGDAS 300



 Score = 36.9 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 9/87 (10%), Positives = 26/87 (29%), Gaps = 6/87 (6%)

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +  +      I +        + + + +    +     +SP G+ + F    +       
Sbjct: 48  YVSYGDGTSQIFIYDFSARTLQQVSKAAWGIQDPMNAVFSPDGKWIAFMGITNNAWNVFF 107

Query: 419 YSIDLNGRNETLINTPAYAS--DPQWV 443
           + +        L N+       DP++ 
Sbjct: 108 WQVGSTSMPINLTNSTGQTRNEDPKFS 134


>gi|261187630|ref|XP_002620234.1| transcriptional repressor TUP1 [Ajellomyces dermatitidis SLH14081]
 gi|239594125|gb|EEQ76706.1| transcriptional repressor TUP1 [Ajellomyces dermatitidis SLH14081]
 gi|327358095|gb|EGE86952.1| transcriptional repressor TUP1 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 584

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 73/204 (35%), Gaps = 18/204 (8%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSS 267
            D ++   RFS + + VA        I  V           + + +      I +  FS 
Sbjct: 280 HDSVVCCVRFSNDGKYVATGCNHSAQIFDVATGQLVTALQDESVLDKDGDLYIRSVCFSP 339

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKE 326
           +G+    +  +D+ + ++  D+ +   + + +    +  S  ++ +   I   S   G +
Sbjct: 340 DGRYLA-TGAEDKQIRVW--DIANRTIKHIFSGHEQDIYSLDFARNGRYIASGS---GDK 393

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QER 384
            + +       Q+ I   ++        SP G  +A          + V         ER
Sbjct: 394 TVRLWDIVDGKQELILSIEDG-VTTVAISPDGRFVAAGSLDKS---VRVWDTTTGYLVER 449

Query: 385 LLVEDSNLQ---APTWSPSGRSLI 405
           L   D ++    +  ++P+GR L+
Sbjct: 450 LENPDGHMDSVYSVAFAPNGRDLV 473



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/332 (13%), Positives = 110/332 (33%), Gaps = 54/332 (16%)

Query: 112 VTGRVIKEGKDRLRV-----EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           V   V      +          +++DV   + +   +                    +S+
Sbjct: 283 VVCCVRFSNDGKYVATGCNHSAQIFDVATGQLVTALQD-------------------ESV 323

Query: 167 TGEKGDFNSRILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
             + GD   R +  S       +G     + V D     I+++    +Q ++   F+ N 
Sbjct: 324 LDKDGDLYIRSVCFSPDGRYLATGAEDKQIRVWDIANRTIKHIFSGHEQDIYSLDFARNG 383

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +A  + D      V L D  +D   + I +    +     S +G+    +   D+++ 
Sbjct: 384 RYIASGSGDK----TVRLWDI-VDGKQELILSIEDGVTTVAISPDGRFVA-AGSLDKSVR 437

Query: 284 IYSVDLQSNAT-ERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN----- 334
           ++  D  +    ERL N    +    S +++P+   +V  S  +   +++ +        
Sbjct: 438 VW--DTTTGYLVERLENPDGHMDSVYSVAFAPNGRDLVSGSL-DKTIKMWELTPPRGMVP 494

Query: 335 -----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                G    R  +  +        +P G  +           +          +++++ 
Sbjct: 495 GAGPKGGKCVRTFEGHKDFVLSVCLTPDGRWVMSGSKDRG---VQFWDPATGNAQMMLQG 551

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 + +PS    +F+    GD  ++++ +
Sbjct: 552 HKNSVISVAPSPTGNLFATG-SGDMRARIWRL 582


>gi|119962824|ref|YP_948832.1| S-layer domain-containing protein [Arthrobacter aurescens TC1]
 gi|119949683|gb|ABM08594.1| putative S-layer domain protein [Arthrobacter aurescens TC1]
          Length = 981

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 58/196 (29%), Gaps = 43/196 (21%)

Query: 259 MILAPRFSSNGKRALISV---------QKDEAMDIYSVDLQSNATERLTNTLFINI---- 305
           M  AP  S++G+                 +E+ D++  D+Q+  T  ++ T         
Sbjct: 588 MPAAPVVSADGRFVAFISASPDLAPNGDSNESEDVFVRDMQTGVTRLVSGTPSGATGNAK 647

Query: 306 --SASYSPDSSQIVFE--------SDREGKEQLYVMQSNGSDQKRIS-----QDKEASYF 350
               S S D   I F         SD      ++V          IS             
Sbjct: 648 SHEPSISADGRYIAFTSGASDLVPSDASKLSDVFVRDMVVGSTTLISATPAGPAGNGQSI 707

Query: 351 DPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVED-------SNLQAP 395
            P  S  G ++AFT          +     + V        RL+              + 
Sbjct: 708 GPSISADGRVVAFTSTAQNLVAGDTNAASDVFVRDMVTQTSRLVSATPLGVPSNGWSSSA 767

Query: 396 TWSPSGRSLIFSRKKD 411
           + S +G+ + FS   D
Sbjct: 768 SLSANGQFVAFSSSSD 783



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 74/259 (28%), Gaps = 58/259 (22%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDE------DILRVYLMDTRIDRAPKRIGNFR---- 257
           P+ +     P  S + + VA+ +          +      +   + +  + +        
Sbjct: 700 PAGNGQSIGPSISADGRVVAFTSTAQNLVAGDTNAASDVFVRDMVTQTSRLVSATPLGVP 759

Query: 258 --SMILAPRFSSNGKRALISVQKDE---------AMDIYSVDLQSNATERLTNTLF---- 302
                 +   S+NG+    S   D+           D++  DL    T  ++ T      
Sbjct: 760 SNGWSSSASLSANGQFVAFSSSSDDLLVGDSPATYSDVFIRDLVQGVTRLVSATPGGGFA 819

Query: 303 --INISASYSPDSSQIVFESDRE-----------GKEQLYVMQSNGSDQKRISQDKEA-- 347
              + S S S D   + F S              G   ++V     +  + +S       
Sbjct: 820 DDSSHSPSLSADGRYVAFGSFASNLDATEPAEVRGTNDVFVRDMVSNVTRTVSVPPPGKP 879

Query: 348 ---SYFDPVWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVEDSNLQAP- 395
                F P  S  G L++F     +           + V        RL+    +  A  
Sbjct: 880 ANDWSFGPSISDDGQLVSFIASGYDMISGESKEAEDVYVRDMTTGSVRLVSATPSGDAVN 939

Query: 396 ------TWSPSGRSLIFSR 408
                 + S  G  L+FS 
Sbjct: 940 EWHLQQSMSGDGLYLVFST 958



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/293 (13%), Positives = 93/293 (31%), Gaps = 65/293 (22%)

Query: 215 FEPRFSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIGN-----FRSMILA 262
            EP  S + + +A+ +        D   +  V++ D  +                   + 
Sbjct: 649 HEPSISADGRYIAFTSGASDLVPSDASKLSDVFVRDMVVGSTTLISATPAGPAGNGQSIG 708

Query: 263 PRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTL------FINISAS 308
           P  S++G+    +           + A D++  D+ +  +  ++ T         + SAS
Sbjct: 709 PSISADGRVVAFTSTAQNLVAGDTNAASDVFVRDMVTQTSRLVSATPLGVPSNGWSSSAS 768

Query: 309 YSPDSSQIVFESDRE---------GKEQLYVMQSNGSDQKRISQDKEASYFD-----PVW 354
            S +   + F S  +             +++        + +S      + D     P  
Sbjct: 769 LSANGQFVAFSSSSDDLLVGDSPATYSDVFIRDLVQGVTRLVSATPGGGFADDSSHSPSL 828

Query: 355 SPQGDLIAFTKFSG-----------EKFAIGVMKKDGSQERLLV-----EDSNLQA--PT 396
           S  G  +AF  F+                + V     +  R +      + +N  +  P+
Sbjct: 829 SADGRYVAFGSFASNLDATEPAEVRGTNDVFVRDMVSNVTRTVSVPPPGKPANDWSFGPS 888

Query: 397 WSPSGRSLIFSR------KKDGDTGSKLYSIDLNGRNETLIN-TPAYASDPQW 442
            S  G+ + F          +      +Y  D+   +  L++ TP+  +  +W
Sbjct: 889 ISDDGQLVSFIASGYDMISGESKEAEDVYVRDMTTGSVRLVSATPSGDAVNEW 941



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 53/182 (29%), Gaps = 36/182 (19%)

Query: 298 TNTLFINISASYSPDSSQIVFES---------DREGKEQLYVMQSNGSDQKRISQDKEAS 348
           T  + +  +   S D   + F S         D    E ++V        + +S     +
Sbjct: 583 TVGIDMPAAPVVSADGRFVAFISASPDLAPNGDSNESEDVFVRDMQTGVTRLVSGTPSGA 642

Query: 349 YFD-----PVWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVED------ 389
             +     P  S  G  IAFT  + +           + V         L+         
Sbjct: 643 TGNAKSHEPSISADGRYIAFTSGASDLVPSDASKLSDVFVRDMVVGSTTLISATPAGPAG 702

Query: 390 -SNLQAPTWSPSGRSLIFSRKKDG------DTGSKLYSIDLNGRNETLIN-TPAYASDPQ 441
                 P+ S  GR + F+           +  S ++  D+  +   L++ TP       
Sbjct: 703 NGQSIGPSISADGRVVAFTSTAQNLVAGDTNAASDVFVRDMVTQTSRLVSATPLGVPSNG 762

Query: 442 WV 443
           W 
Sbjct: 763 WS 764


>gi|327288350|ref|XP_003228891.1| PREDICTED: WD repeat-containing protein 5-like [Anolis
           carolinensis]
          Length = 334

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 148 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 202

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|315364750|pdb|3PSL|A Chain A, Fine-Tuning The Stimulation Of Mll1 Methyltransferase
           Activity By A Histone H3 Based Peptide Mimetic
 gi|315364751|pdb|3PSL|B Chain B, Fine-Tuning The Stimulation Of Mll1 Methyltransferase
           Activity By A Histone H3 Based Peptide Mimetic
          Length = 318

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 19  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 74

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 75  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 131

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 132 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 186

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 187 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 228


>gi|312152414|gb|ADQ32719.1| WD repeat domain 5 [synthetic construct]
          Length = 334

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 148 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 202

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|311246727|ref|XP_001927336.2| PREDICTED: WD repeat-containing protein 5 [Sus scrofa]
 gi|311246731|ref|XP_003122317.1| PREDICTED: WD repeat-containing protein 5-like [Sus scrofa]
          Length = 334

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 148 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 202

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|309319961|pdb|3N0E|A Chain A, Crystal Structure Of Wdr5 Mutant (W330y)
          Length = 315

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 16  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 71

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 72  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 128

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 129 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 183

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 225


>gi|309319960|pdb|3N0D|A Chain A, Crystal Structure Of Wdr5 Mutant (W330f)
          Length = 315

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 16  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 71

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 72  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 128

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 129 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 183

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 225


>gi|296482157|gb|DAA24272.1| WD repeat-containing protein 5 [Bos taurus]
          Length = 313

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 148 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 202

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|224073673|ref|XP_002199389.1| PREDICTED: WD repeat domain 5 [Taeniopygia guttata]
          Length = 334

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 148 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 202

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|209156763|pdb|3EMH|A Chain A, Structural Basis Of Wdr5-Mll Interaction
          Length = 318

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 19  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 74

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 75  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 131

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 132 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 186

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 187 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 228


>gi|149410283|ref|XP_001506016.1| PREDICTED: similar to Chain A, Structure Of Wdr5 [Ornithorhynchus
           anatinus]
          Length = 334

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 148 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 202

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|116667222|pdb|2G99|A Chain A, Structural Basis For The Specific Recognition Of
           Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5
 gi|116667223|pdb|2G99|B Chain B, Structural Basis For The Specific Recognition Of
           Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5
          Length = 308

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 9   YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 64

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 65  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 121

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 122 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 176

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 177 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 218


>gi|116667226|pdb|2G9A|A Chain A, Structural Basis For The Specific Recognition Of
           Methylated Histone H3 Lysine 4 By The Wd-40 Protein Wdr5
          Length = 311

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 12  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 67

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 68  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 124

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 125 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 179

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 180 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 221


>gi|112491198|pdb|2H9L|A Chain A, Wdr5delta23
 gi|112491217|pdb|2H9P|A Chain A, Wdr5 In Complex With Trimethylated H3k4 Peptide
          Length = 329

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 30  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 85

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 86  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 142

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 143 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 197

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 198 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 239


>gi|112491200|pdb|2H9M|A Chain A, Wdr5 In Complex With Unmodified H3k4 Peptide
 gi|112491202|pdb|2H9M|C Chain C, Wdr5 In Complex With Unmodified H3k4 Peptide
 gi|112491206|pdb|2H9N|A Chain A, Wdr5 In Complex With Monomethylated H3k4 Peptide
 gi|112491208|pdb|2H9N|C Chain C, Wdr5 In Complex With Monomethylated H3k4 Peptide
 gi|122921490|pdb|2O9K|A Chain A, Wdr5 In Complex With Dimethylated H3k4 Peptide
 gi|122921492|pdb|2O9K|C Chain C, Wdr5 In Complex With Dimethylated H3k4 Peptide
          Length = 313

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 14  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 69

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 70  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 126

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 127 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 181

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 182 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 223


>gi|112491015|pdb|2H13|A Chain A, Crystal Structure Of Wdr5HISTONE H3 COMPLEX
 gi|112491018|pdb|2H14|A Chain A, Crystal Of Wdr5 (Apo-Form)
 gi|313754487|pdb|3P4F|A Chain A, Structural And Biochemical Insights Into Mll1 Core Complex
           Assembly And Regulation
          Length = 317

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 18  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 73

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 74  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 130

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 131 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 185

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 186 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 227


>gi|110590554|pdb|2H68|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
           Of The Mll1 Complex
 gi|110590555|pdb|2H68|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
           Of The Mll1 Complex
 gi|110590561|pdb|2H6K|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
           Of The Mll1 Complex
 gi|110590562|pdb|2H6K|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
           Of The Mll1 Complex
 gi|110590565|pdb|2H6N|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
           Of The Mll1 Complex
 gi|110590566|pdb|2H6N|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
           Of The Mll1 Complex
 gi|110590569|pdb|2H6Q|A Chain A, Histone H3 Recognition And Presentation By The Wdr5 Module
           Of The Mll1 Complex
 gi|110590570|pdb|2H6Q|B Chain B, Histone H3 Recognition And Presentation By The Wdr5 Module
           Of The Mll1 Complex
 gi|208435741|pdb|3EG6|A Chain A, Structure Of Wdr5 Bound To Mll1 Peptide
          Length = 312

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 13  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 68

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 69  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 125

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 126 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 180

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 181 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 222


>gi|109157928|pdb|2GNQ|A Chain A, Structure Of Wdr5
          Length = 336

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 37  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 92

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 93  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 149

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 150 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 204

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 205 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 246


>gi|157428074|ref|NP_001098945.1| WD repeat-containing protein 5 [Bos taurus]
 gi|122136017|sp|Q2KIG2|WDR5_BOVIN RecName: Full=WD repeat-containing protein 5
 gi|86438082|gb|AAI12651.1| WDR5 protein [Bos taurus]
          Length = 334

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 148 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 202

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|16554627|ref|NP_060058.1| WD repeat-containing protein 5 [Homo sapiens]
 gi|16554629|ref|NP_438172.1| WD repeat-containing protein 5 [Homo sapiens]
 gi|18252790|ref|NP_543124.1| WD repeat-containing protein 5 [Mus musculus]
 gi|84781686|ref|NP_001034123.1| WD repeat-containing protein 5 [Rattus norvegicus]
 gi|149738161|ref|XP_001497454.1| PREDICTED: WD repeat domain 5 [Equus caballus]
 gi|301770653|ref|XP_002920741.1| PREDICTED: WD repeat-containing protein 5-like [Ailuropoda
           melanoleuca]
 gi|332833279|ref|XP_001155196.2| PREDICTED: WD repeat-containing protein 5 [Pan troglodytes]
 gi|48429182|sp|P61964|WDR5_HUMAN RecName: Full=WD repeat-containing protein 5; AltName:
           Full=BMP2-induced 3-kb gene protein
 gi|48429183|sp|P61965|WDR5_MOUSE RecName: Full=WD repeat-containing protein 5; AltName:
           Full=BMP2-induced 3-kb gene protein; AltName: Full=WD
           repeat-containing protein BIG-3
 gi|123781540|sp|Q498M4|WDR5_RAT RecName: Full=WD repeat-containing protein 5
 gi|302148662|pdb|2XL2|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel
           Site
 gi|302148663|pdb|2XL2|B Chain B, Wdr5 In Complex With An Rbbp5 Peptide Recruited To Novel
           Site
 gi|302148666|pdb|2XL3|A Chain A, Wdr5 In Complex With An Rbbp5 Peptide And Histone H3
           Peptide
 gi|302148667|pdb|2XL3|B Chain B, Wdr5 In Complex With An Rbbp5 Peptide And Histone H3
           Peptide
 gi|16589079|gb|AAL27006.1|AF416510_1 WD repeat protein BIG-3 [Mus musculus]
 gi|7020724|dbj|BAA91248.1| unnamed protein product [Homo sapiens]
 gi|12804457|gb|AAH01635.1| WD repeat domain 5 [Homo sapiens]
 gi|16359284|gb|AAH16103.1| WD repeat domain 5 [Mus musculus]
 gi|19388008|gb|AAH25801.1| Wdr5 protein [Mus musculus]
 gi|26344836|dbj|BAC36067.1| unnamed protein product [Mus musculus]
 gi|56207217|emb|CAI18774.1| WD repeat domain 5 [Homo sapiens]
 gi|71679771|gb|AAI00157.1| WD repeat domain 5 [Rattus norvegicus]
 gi|123858123|emb|CAM21005.1| WD repeat domain 5 [Mus musculus]
 gi|148676423|gb|EDL08370.1| WD repeat domain 5 [Mus musculus]
 gi|149039212|gb|EDL93432.1| rCG45861, isoform CRA_a [Rattus norvegicus]
 gi|208968057|dbj|BAG73867.1| WD repeat domain containing protein 5 [synthetic construct]
          Length = 334

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 148 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 202

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|6714707|emb|CAB66159.1| hypothetical protein [Homo sapiens]
          Length = 362

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 63  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 118

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 119 SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 175

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 176 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 230

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 231 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 272


>gi|90418458|ref|ZP_01226370.1| possible cytochrome c with WD-repeat domain [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90338130|gb|EAS51781.1| possible cytochrome c with WD-repeat domain [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 450

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 72/197 (36%), Gaps = 13/197 (6%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFI 303
             D  P+R+      + A   S +G R  ++   D ++ ++ +         +L      
Sbjct: 7   GADALPERLVGHGGPVKAVALSDDGTR-ALTASFDYSIILWDMTGPDGTVATQLAGHDAA 65

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               ++ P + + V  SD +G   ++       D ++   D      D   SP G   A 
Sbjct: 66  VNDVAFVPGTDKAVSVSD-DGSFAIW--DLATGDLEQRIADTPVKVLDVAVSPDGRFAAA 122

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            ++ G    I  + +     R      N+ A  ++  GR L F+   DG   +  + +D 
Sbjct: 123 ARWDGTA-RIFDIAEGREIARAEGHQGNVNAVAFALDGRQL-FTAGYDGAIRA--WPLD- 177

Query: 424 NGRNE---TLINTPAYA 437
           +GR      ++ T  + 
Sbjct: 178 DGRIAGSSRVLYTHGWG 194



 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 74/215 (34%), Gaps = 13/215 (6%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGAN--IRYLTPSRDQILF 215
           +D + + + G  G   +  L    +   +     S+ + D  G +  +       D  + 
Sbjct: 8   ADALPERLVGHGGPVKAVALSDDGTRALTASFDYSIILWDMTGPDGTVATQLAGHDAAVN 67

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +  F P   K    + D        + D       +RI +    +L    S +G+ A  +
Sbjct: 68  DVAFVPGTDKAVSVSDDGSFA----IWDLATGDLEQRIADTPVKVLDVAVSPDGRFAA-A 122

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            + D    I+ +  +     R         + +++ D  Q+ F +  +G  + + +  +G
Sbjct: 123 ARWDGTARIFDI-AEGREIARAEGHQGNVNAVAFALDGRQL-FTAGYDGAIRAWPLD-DG 179

Query: 336 --SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             +   R+              P G L+AF   +G
Sbjct: 180 RIAGSSRVLYTHGWGVNVITPLPGGTLLAFGSQNG 214


>gi|302345325|ref|YP_003813678.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           melaninogenica ATCC 25845]
 gi|302149623|gb|ADK95885.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           melaninogenica ATCC 25845]
          Length = 729

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 24/148 (16%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  S D  Q+V  S + G     +     +  +++      S+ D   S  G  +     
Sbjct: 51  AQISSDGRQVVKYSFKTGSSTGVIFDLADAKGEQLK-----SFDDYQISSDGSRLLLQTN 105

Query: 367 SGEKFA------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +   +         +      Q + L +D + Q PT+SP GR + +  +      + +Y 
Sbjct: 106 TNRIYRRSFTADFYLYDVKTKQLKKLSKDGSEQIPTFSPDGRQIAYVHQ------NNIYI 159

Query: 421 IDLNGRNETLINTPAYASD-----PQWV 443
            D  G +   + T    +      P WV
Sbjct: 160 TD--GESVKQVTTDGEFNKVINGLPDWV 185



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 63/185 (34%), Gaps = 37/185 (20%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +      + SS+G++ +    K  +      DL     E+L +          S D S++
Sbjct: 45  KGTSEYAQISSDGRQVVKYSFKTGSSTGVIFDLADAKGEQLKSFDDYQ----ISSDGSRL 100

Query: 317 VFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           + +++      R      Y+        K++S+D   S   P +SP G  IA+   +   
Sbjct: 101 LLQTNTNRIYRRSFTADFYLYDVKTKQLKKLSKDG--SEQIPTFSPDGRQIAYVHQN--- 155

Query: 371 FAIGVMKKDGSQERLLVEDSNL-------------------QAPTWSPSGRSLIFSRKKD 411
             I +   DG   + +  D                       A  WS   ++L + R  +
Sbjct: 156 -NIYI--TDGESVKQVTTDGEFNKVINGLPDWVNEEEFGFNNALAWSADSKTLSWIRYDE 212

Query: 412 GDTGS 416
            +  S
Sbjct: 213 SEVKS 217



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 40/296 (13%), Positives = 91/296 (30%), Gaps = 63/296 (21%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           SR+L  + +        +      D    +    S+D     P FSP+ +++AY   ++ 
Sbjct: 98  SRLLLQTNTNRIYRRSFTADFYLYDVKTKQLKKLSKDGSEQIPTFSPDGRQIAYVHQNN- 156

Query: 235 DILRVYLMDTRIDRAPKRIGNFR---------------SMILAPRFSSNGKRALISVQKD 279
               +Y+ D    +     G F                    A  +S++ K        +
Sbjct: 157 ----IYITDGESVKQVTTDGEFNKVINGLPDWVNEEEFGFNNALAWSADSKTLSWIRYDE 212

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPD------------SSQIVFE-SDREGKE 326
             +  Y++           +    ++   Y  D            S    +  S  +G  
Sbjct: 213 SEVKSYTLQFYKG------SHPAYDMFDIYPGDYSYKYPKAGEANSKVSAWSYSLSDGAV 266

Query: 327 QLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQER 384
           + Y +  +      RI    +A+           +I +T     ++  +          +
Sbjct: 267 RKYDLPLAADGYIPRIKSTFDAN----------RIILYTMNRHQDELNLYAANPLTGTCK 316

Query: 385 LLVEDS--------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           LL+++S         ++  +       ++    +DG     LY  + +G+    I+
Sbjct: 317 LLIKESVPKYVKEEAMEGISIMKD--YILVPSDRDGYM--HLYLYNKDGKLLRQID 368


>gi|191170477|ref|ZP_03032030.1| conserved hypothetical protein [Escherichia coli F11]
 gi|300988873|ref|ZP_07178867.1| hypothetical protein HMPREF9553_03591 [Escherichia coli MS 200-1]
 gi|190909285|gb|EDV68871.1| conserved hypothetical protein [Escherichia coli F11]
 gi|300305821|gb|EFJ60341.1| hypothetical protein HMPREF9553_03591 [Escherichia coli MS 200-1]
 gi|324012647|gb|EGB81866.1| hypothetical protein HMPREF9533_03244 [Escherichia coli MS 60-1]
          Length = 416

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 70/203 (34%), Gaps = 41/203 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA--LISVQKDEAMDIYSV----DLQSNAT-----------E 295
           +GN     +    S  G++   L  V+  +    + V     L    T            
Sbjct: 223 VGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKVAGDAPLSGTETTLPAPPRGVVQR 282

Query: 296 RLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT T        +NI   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 283 RLTFTHHRIYPGLVNIPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 342

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I        +   L E      +  A  +SP G
Sbjct: 343 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDG 398

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN 424
           + L +          +L+  + +
Sbjct: 399 QWLAWMED------GQLWITETD 415



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 415



 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 5/104 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            ++   +   N  S   A  FS +G+       +D  + I   D
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW--MEDGQLWITETD 415


>gi|325856647|ref|ZP_08172285.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           denticola CRIS 18C-A]
 gi|325483361|gb|EGC86336.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           denticola CRIS 18C-A]
          Length = 723

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 47/145 (32%), Gaps = 24/145 (16%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S D  Q+V  S R GK    +   +   +  +    +        S  G  +     +  
Sbjct: 48  SADGRQVVKYSFRTGKPTGVIFDLSDVKEGLLKVFDDY-----QISADGCRLLLQTNTNR 102

Query: 370 KFA------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +         + +    Q + L +D   Q P +SP GR + +  K      + +Y  D 
Sbjct: 103 IYRRSFTADFYLYEVKTKQLKKLSKDGAEQIPVFSPDGRQIAYVHK------NNIYITD- 155

Query: 424 NGRNETLINTPAYASD-----PQWV 443
            G N   +      +      P WV
Sbjct: 156 -GENVRQVTADGAFNKVINGLPDWV 179



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 98/336 (29%), Gaps = 69/336 (20%)

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           V F L DVK+    +   +  S    R +  T ++ IY+              F    V 
Sbjct: 67  VIFDLSDVKEGLLKVFDDYQISADGCRLLLQTNTNRIYRRSFTAD--------FYLYEVK 118

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +  +K                  S+D     P FSP+ +++AY   ++     +Y+ D  
Sbjct: 119 TKQLKKL----------------SKDGAEQIPVFSPDGRQIAYVHKNN-----IYITDGE 157

Query: 246 IDRAPKRIGNFR---------------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             R     G F                    A  +S++ +        +  +  YS+ L 
Sbjct: 158 NVRQVTADGAFNKVINGLPDWVNEEEFGFNNALAWSADSRTLSWIRYDESKVKTYSLQLF 217

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL--YVMQSNGSDQKRISQDKEAS 348
                   +    N   +Y P      +    E   Q+  +         ++     EA 
Sbjct: 218 KG------SHPAFNKYETY-PGEYSYKYPKAGEDNSQVSAWTYSLGDGSVRKYDLPLEAD 270

Query: 349 YFDPVW--SPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLL--------VEDSNLQAPT 396
            + P    +   D I         ++  +          RLL        V++  ++   
Sbjct: 271 GYIPRIKTTADADRIILYTMNRHQDELNLYAANPKTGACRLLIRERVPKYVKEEAMEGIR 330

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                  ++    +DG     LY     G+    I+
Sbjct: 331 IMKD--YILLPSDRDGYM--HLYLYSKEGKLLRQID 362


>gi|195018998|ref|XP_001984886.1| GH14795 [Drosophila grimshawi]
 gi|193898368|gb|EDV97234.1| GH14795 [Drosophila grimshawi]
          Length = 404

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 83/215 (38%), Gaps = 21/215 (9%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           + RD A  R+ T     I    RFSP+  ++A ++ D      V L + +      R  +
Sbjct: 5   LFRDPALERHFTGHTGHITQL-RFSPDGNQIATSSLD----ATVILWNLKQAARCIRFAS 59

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             + +    +S  G     S  +D  + I+   ++  + E L +   +  S  + P    
Sbjct: 60  HSAAVYGVSWSPKGNFIA-SCSQDRTVKIWEPKVRGVSGEFLAHGKPV-RSVDFDPTGQM 117

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPV-WSPQGDLIAFTKFSGEKFA 372
           ++  SD +   +L+ +      +++   S  ++ ++     +SP G LIA          
Sbjct: 118 LLTASD-DKAVKLWRVS-----RRQFISSFAQQTNWVRAAKFSPNGKLIATVSDDKS--- 168

Query: 373 IGVMKKDGSQ-ERLLVEDSNL-QAPTWSPSGRSLI 405
           + + +    +  R+  E+    +   W P G  + 
Sbjct: 169 LRIYEVGTGECVRIFTEERAAPRQVAWHPWGNMVA 203



 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 82/236 (34%), Gaps = 24/236 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S    ++   +SP    +A  + D      V + + ++             + +  F 
Sbjct: 57  FASHSAAVYGVSWSPKGNFIASCSQDR----TVKIWEPKVRGVSGEFLAHGKPVRSVDFD 112

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESDR 322
             G+  L +   D+A+ ++ V     +  +  ++     +    A +SP+   I   SD 
Sbjct: 113 PTGQMLL-TASDDKAVKLWRV-----SRRQFISSFAQQTNWVRAAKFSPNGKLIATVSD- 165

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              + L + +    +  RI  ++ A+     W P G+++A            VM     Q
Sbjct: 166 --DKSLRIYEVGTGECVRIFTEERAAPRQVAWHPWGNMVAVALGCNRIKIFDVMNSQLLQ 223

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYA 437
             + V  + +    + PSG  L+      G     +  +D L GR    +     A
Sbjct: 224 MYV-VHSAPVNDLAFHPSGNFLL-----SGSDDKSIRILDLLEGRPIYTLTGHTDA 273



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 9/130 (6%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDP 352
               T          +SPD +QI   S  +    L+ ++      + I      A+ +  
Sbjct: 12  ERHFTGHTGHITQLRFSPDGNQIA-TSSLDATVILWNLKQA---ARCIRFASHSAAVYGV 67

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            WSP+G+ IA          I   K  G     L     +++  + P+G+ L+ +     
Sbjct: 68  SWSPKGNFIASCSQD-RTVKIWEPKVRGVSGEFLAHGKPVRSVDFDPTGQMLLTASD--- 123

Query: 413 DTGSKLYSID 422
           D   KL+ + 
Sbjct: 124 DKAVKLWRVS 133



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 62/171 (36%), Gaps = 9/171 (5%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +        I   RFS +G +   +   D  + ++++   +    R  +        S+S
Sbjct: 13  RHFTGHTGHITQLRFSPDGNQIA-TSSLDATVILWNLKQAARCI-RFASHSAAVYGVSWS 70

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P  + I   S  +   +++  +  G   + ++  K        + P G ++  T    + 
Sbjct: 71  PKGNFIASCSQ-DRTVKIWEPKVRGVSGEFLAHGKP--VRSVDFDPTGQMLL-TASDDKA 126

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +  + +         + + ++A  +SP+G+ +        D   ++Y +
Sbjct: 127 VKLWRVSRRQFISSFAQQTNWVRAAKFSPNGKLIATVSD---DKSLRIYEV 174


>gi|50428732|gb|AAT77083.1| putative WD G-beta repeat protein [Oryza sativa Japonica Group]
          Length = 380

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 79/216 (36%), Gaps = 19/216 (8%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +R       + +   +FSP+ + +A A+ D   +LRV+          +  G+    
Sbjct: 8   GYALRATLAGHRRAVSAVKFSPDGRLLASASAD--KLLRVWSTSDLASPVAELAGHGEG- 64

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINIS----ASYSP 311
           +    FS +G+    S   D  + I+ +            RL  TL  + +     ++SP
Sbjct: 65  VSDLAFSPDGRLIA-SASDDRTVRIWDLGDGGGGGGGGEPRLMKTLSGHTNYAFCLAFSP 123

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             + +   S     E + V +       R+            ++  G +I    + G   
Sbjct: 124 HGNMLASGSF---DETVRVWEVRSGRCLRVLPAHSEPVTSVDFNRDGAMIVSGSYDG-LC 179

Query: 372 AIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
            I      G   + L++D +  +    +SP+G+ ++
Sbjct: 180 RIW-DSATGHCIKTLIDDESPPVSFAKFSPNGKFVL 214



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 14/184 (7%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           S      L V    D A+         + + +  FSP+ + +A A+ D    +R++ +  
Sbjct: 36  SASADKLLRVWSTSDLASPVAELAGHGEGVSDLAFSPDGRLIASASDD--RTVRIWDLGD 93

Query: 245 RID-------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                     R  K +    +      FS +G     S   DE + ++ V         L
Sbjct: 94  GGGGGGGGEPRLMKTLSGHTNYAFCLAFSPHGNMLA-SGSFDETVRVWEV-RSGRCLRVL 151

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S  ++ D + IV  S  +G  +++   + G   K +  D+        +SP 
Sbjct: 152 PAHSEPVTSVDFNRDGAMIVSGSY-DGLCRIWD-SATGHCIKTLIDDESPPVSFAKFSPN 209

Query: 358 GDLI 361
           G  +
Sbjct: 210 GKFV 213



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 25/90 (27%), Gaps = 3/90 (3%)

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            + G   +        +     +SP G L+A                      L      
Sbjct: 5   DNPGYALRATLAGHRRAVSAVKFSPDGRLLASASADKLLRVWSTSDLASPVAELAGHGEG 64

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +    +SP GR +  +     D   +++ +
Sbjct: 65  VSDLAFSPDGRLIASASD---DRTVRIWDL 91


>gi|311277343|ref|YP_003939574.1| putative ATP/GTP-binding protein [Enterobacter cloacae SCF1]
 gi|308746538|gb|ADO46290.1| putative ATP/GTP-binding protein [Enterobacter cloacae SCF1]
          Length = 407

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 46/155 (29%), Gaps = 21/155 (13%)

Query: 280 EAMDIYSVDLQSNATERLT-----NTLFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT         +      +   +P    + F   D  G  QL+
Sbjct: 255 GTPQTMPAPPAGVMQRRLTFTHQNRYPGLVSQPRHWVRSNPQGDTLAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +   G + ++++           W P G  + F   +     + +   +  +   L  D
Sbjct: 315 CISPQGENLRQVTTAS-GVQSAFNWHPSGKWLGFVLEN----RLALCDVETGEITFLTTD 369

Query: 390 S----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                +  A  +SP G  + +    DG    +L+ 
Sbjct: 370 RENPPSADAVVFSPDGALIAWMEDVDGYR--QLWV 402



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 78/221 (35%), Gaps = 21/221 (9%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           SDDI ++   E    N R+ F+ ++    G     L ++D       +       +   P
Sbjct: 199 SDDINRAY-EEGWVGNDRLAFIGDTLSARGEKVPELFIVDLPKDEPGWKCAGATPLQGTP 257

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +  P              +++  L  T  +R P  +   R  + +   +  G      ++
Sbjct: 258 QTMPA---------PPAGVMQRRLTFTHQNRYPGLVSQPRHWVRS---NPQGDTLAFLMR 305

Query: 278 KD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D     ++ +  Q     ++T    +  + ++ P    + F  +     +L +      
Sbjct: 306 DDNGVAQLWCISPQGENLRQVTTASGVQSAFNWHPSGKWLGFVLE----NRLALCDVETG 361

Query: 337 DQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +   ++ D+E   S    V+SP G LIA+ +       + V
Sbjct: 362 EITFLTTDRENPPSADAVVFSPDGALIAWMEDVDGYRQLWV 402



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 53/133 (39%), Gaps = 12/133 (9%)

Query: 208 PSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                ++ +PR     +P    +A+   DD  + +++ +  +     +++     +  A 
Sbjct: 278 NRYPGLVSQPRHWVRSNPQGDTLAFLMRDDNGVAQLWCISPQ-GENLRQVTTASGVQSAF 336

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFES 320
            +  +GK     ++      +   D+++     LT       SA    +SPD + I +  
Sbjct: 337 NWHPSGKWLGFVLEN----RLALCDVETGEITFLTTDRENPPSADAVVFSPDGALIAWME 392

Query: 321 DREGKEQLYVMQS 333
           D +G  QL+V  +
Sbjct: 393 DVDGYRQLWVAPT 405



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 30/108 (27%), Gaps = 8/108 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L  +   G N+R +T     +     + P+ + + +   +     R+ L D 
Sbjct: 305 RDDNGVAQLWCISPQGENLRQVTT-ASGVQSAFNWHPSGKWLGFVLEN-----RLALCDV 358

Query: 245 RIDRAPKRIGN--FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                     +        A  FS +G         D    ++    Q
Sbjct: 359 ETGEITFLTTDRENPPSADAVVFSPDGALIAWMEDVDGYRQLWVAPTQ 406


>gi|331660031|ref|ZP_08360969.1| conserved hypothetical protein [Escherichia coli TA206]
 gi|331053246|gb|EGI25279.1| conserved hypothetical protein [Escherichia coli TA206]
          Length = 416

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT T        +NI   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRIYPGLVNIPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +          +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWMED------GQLWITETD 415



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 415



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 5/104 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            ++   +   N  S   A  FS +G+       +D  + I   D
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWLAW--MEDGQLWITETD 415


>gi|26250430|ref|NP_756470.1| hypothetical protein c4609 [Escherichia coli CFT073]
 gi|227883909|ref|ZP_04001714.1| ATP/GTP-binding protein [Escherichia coli 83972]
 gi|300984739|ref|ZP_07177095.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|301047505|ref|ZP_07194582.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|26110860|gb|AAN83044.1|AE016769_159 Hypothetical protein yidR [Escherichia coli CFT073]
 gi|227839187|gb|EEJ49653.1| ATP/GTP-binding protein [Escherichia coli 83972]
 gi|300300620|gb|EFJ57005.1| conserved hypothetical protein [Escherichia coli MS 185-1]
 gi|300408356|gb|EFJ91894.1| conserved hypothetical protein [Escherichia coli MS 45-1]
 gi|315292879|gb|EFU52231.1| conserved hypothetical protein [Escherichia coli MS 153-1]
          Length = 416

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G +  +++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPHQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +          +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLAWMED------GQLWITETD 415



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPHQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 415



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 8/114 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G     LT ++  I     + P+ + + +    D 
Sbjct: 310 TQIAFLM---RDDNGIVQLWLISPQGGEPHQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 364

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            I   +     ++   +   N  S   A  FS +G+       +D  + I   D
Sbjct: 365 RIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW--MEDGQLWITETD 415


>gi|327402900|ref|YP_004343738.1| putative peptidase [Fluviicola taffensis DSM 16823]
 gi|327318408|gb|AEA42900.1| putative peptidase [Fluviicola taffensis DSM 16823]
          Length = 676

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 77/235 (32%), Gaps = 17/235 (7%)

Query: 215 FEPRFS-PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
              ++S P    + +     E          + +  P   G F  +  +  FS +G+   
Sbjct: 174 HWNQWSTPTVLHLYWYESSTEGKFTKKGDVMQGENFPSVTGPFGGIE-SICFSKDGQTIY 232

Query: 274 ISVQK--------DEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES-DRE 323
            S +K            +IY+       T  L++     + + + +     + + S +++
Sbjct: 233 YSTKKMAGKNFAQSTNSEIYAFHTSDKITTTLSSAHKGYDTNPAINFTGKSLAWLSMEKD 292

Query: 324 G----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           G    K ++ +M      +K ++   + S  D  W P  ++I FT        +  +   
Sbjct: 293 GFEADKNRIRIMDLASRQEKDLTASLDLSVNDFTWHPSKEIIYFTATVKATKQLYSLDVV 352

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +   L  D      ++S     ++  R+               G NE L +  
Sbjct: 353 SGKILQLTSD-RCDYVSFSVMKDRILLERQDMIHPTDIWIFTPKTGLNEQLTHAN 406


>gi|331249600|ref|XP_003337416.1| transcriptional repressor rco-1 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309316406|gb|EFP92997.1| transcriptional repressor rco-1 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 387

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 24/211 (11%)

Query: 210 RDQILFEPRFSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            D ++   +FSP+   +A     + +  +                 +   N+   I +  
Sbjct: 30  HDSVVCCVKFSPDGTILATGCNRFTSLYNTRTGSKICQLLDDTHGTQVADNY---IRSAS 86

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK    +  +D  + I+ V  Q     R         S ++SPD   +V  S  + 
Sbjct: 87  FSPDGKFLA-TGSEDRIIRIWDV-AQKRIVNRFQGHKSEIYSLAFSPDGRMLVSGSG-DK 143

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPV--------WSPQGDLIAFTKFSGEKFAIGVM 376
             +++ M         + ++   +   PV         SP G L+A          + + 
Sbjct: 144 TARIWDMNVGNCLFHLMIEESGGADSSPVDAGVTSVCVSPDGSLLAAGSLDT---VVRLW 200

Query: 377 KKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
                Q   +L     ++ +  +SP G+ L+
Sbjct: 201 DTTNGQLLDKLKGHKDSVYSVAFSPDGKFLV 231



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 75/269 (27%), Gaps = 65/269 (24%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            R+WDV  ++ +            R   H    +IY       G            +VSG
Sbjct: 103 IRIWDVAQKRIV-----------NRFQGHK--SEIYSLAFSPDG----------RMLVSG 139

Query: 188 IIKNSLCVMDRDGANI--RYLTPSRDQILFEP--------RFSPNQQKVAYATYDDEDIL 237
               +  + D +  N     +          P          SP+   +A  + D     
Sbjct: 140 SGDKTARIWDMNVGNCLFHLMIEESGGADSSPVDAGVTSVCVSPDGSLLAAGSLDT---- 195

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-------------ISVQKDEAMDI 284
            V L DT   +   ++   +  + +  FS +GK  +              ++ ++     
Sbjct: 196 VVRLWDTTNGQLLDKLKGHKDSVYSVAFSPDGKFLVSGSLDKTLKLWDLATLNREGNPPF 255

Query: 285 YSV----DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             +    D  ++A+  L N   I        +  +I   SDR      +      +    
Sbjct: 256 NGLVKKEDPANSASSSLPNPPAIERG----ENGEKI--TSDRG-----FDSSRPSTTCTT 304

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                +        SP G+ I        
Sbjct: 305 TLIGHKDYVLSVAVSPDGEWIMSGSKDRG 333



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 17/123 (13%)

Query: 309 YSPDSSQIV-----FES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +SPD + +      F S    R G +   ++          +Q  +       +SP G  
Sbjct: 39  FSPDGTILATGCNRFTSLYNTRTGSKICQLLDDTHG-----TQVADNYIRSASFSPDGKF 93

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +A T        I  + +     R     S + +  +SP GR L+      GD  ++++ 
Sbjct: 94  LA-TGSEDRIIRIWDVAQKRIVNRFQGHKSEIYSLAFSPDGRMLV---SGSGDKTARIWD 149

Query: 421 IDL 423
           +++
Sbjct: 150 MNV 152



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 12/143 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + + D     I          ++   FSP+ + +   + D     R++ M+  
Sbjct: 96  TGSEDRIIRIWDVAQKRIVNRFQGHKSEIYSLAFSPDGRMLVSGSGD--KTARIWDMNVG 153

Query: 246 IDRAPKRIGNFRSMILAPR--------FSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                  I        +P          S +G     +   D  + ++         ++L
Sbjct: 154 NCLFHLMIEESGGADSSPVDAGVTSVCVSPDGSLLA-AGSLDTVVRLWDT-TNGQLLDKL 211

Query: 298 TNTLFINISASYSPDSSQIVFES 320
                   S ++SPD   +V  S
Sbjct: 212 KGHKDSVYSVAFSPDGKFLVSGS 234


>gi|260219976|emb|CBA27052.1| Oligogalacturonate lyase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 382

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 66/189 (34%), Gaps = 30/189 (15%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYAT 230
            F+ + +         +I   +  ++ DG+N+R      + +      + P+   + + +
Sbjct: 197 PFDDKTVAFCHEGTHDLIDARMWFVNEDGSNLRCGKEHDQGESCTHEFWVPDGSAMVFVS 256

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFR--SMILAPRFSSNGKRAL-------------IS 275
           Y      R       +    + +      S +++   +++G   +              S
Sbjct: 257 YFKGRSERAMCSLDPVTLQTRVLTTMPPCSHLMS---NADGSLIVGDGSGTPVDVSDSSS 313

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLF-----------INISASYSPDSSQIVFESDREG 324
            +      +Y  DL++    +L                 +   S++P+  Q++F SD EG
Sbjct: 314 HKVQNDPYLYVFDLKAGNMRKLARHDSSWRVYLGNRQVTHPHPSFTPNERQVLFTSDAEG 373

Query: 325 KEQLYVMQS 333
           +  LY++  
Sbjct: 374 EPALYLVDL 382



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 69/241 (28%), Gaps = 43/241 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           + P      +            +    +  A   I   +  +  P++   + K      +
Sbjct: 149 WFPLTDWKKFGEMFHSKPRCRLIRIDLLTGARAVIHEEKLWLGHPQYRPFDDKTVAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFESDREGKEQ-- 327
                    ++ V+   +           +         + PD S +VF S  +G+ +  
Sbjct: 209 GTHDLIDARMWFVNEDGSNLR---CGKEHDQGESCTHEFWVPDGSAMVFVSYFKGRSERA 265

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------------FTKFSGEKFAIG 374
           +  +       + ++     S+   + +  G LI               +        + 
Sbjct: 266 MCSLDPVTLQTRVLTTMPPCSHL--MSNADGSLIVGDGSGTPVDVSDSSSHKVQNDPYLY 323

Query: 375 VMKKDGSQERLLVE------------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           V        R L                    P+++P+ R ++F+   +G+    LY +D
Sbjct: 324 VFDLKAGNMRKLARHDSSWRVYLGNRQVTHPHPSFTPNERQVLFTSDAEGE--PALYLVD 381

Query: 423 L 423
           L
Sbjct: 382 L 382



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 69/189 (36%), Gaps = 26/189 (13%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDRE 323
           FS++G + +   +  +    + +DLQ+    +LT+    N    + SPD   + F   R 
Sbjct: 43  FSNDGNQLVFGARSGDEWHYHRLDLQTRVATQLTDQPGENTFGGFLSPDDRFLYFV--RA 100

Query: 324 GKEQLYVMQSNGSDQKRIS----QDKEASYFDPV--------------WSPQGDLIAFTK 365
            +E + +  +   ++   +         ++                  W P  D   F +
Sbjct: 101 ERELIRLELATLKEECVYTVPSDWVGYGTWVANSACTKMVGIEILGADWFPLTDWKKFGE 160

Query: 366 FSGEKFAIGVMKKD--GSQERLLVEDSNL-QAPTWSP-SGRSLIFSRKKDGDT-GSKLYS 420
               K    +++ D       ++ E+      P + P   +++ F  +   D   ++++ 
Sbjct: 161 MFHSKPRCRLIRIDLLTGARAVIHEEKLWLGHPQYRPFDDKTVAFCHEGTHDLIDARMWF 220

Query: 421 IDLNGRNET 429
           ++ +G N  
Sbjct: 221 VNEDGSNLR 229



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 47/136 (34%), Gaps = 15/136 (11%)

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            Q  F S  +      V + + +D    +      ++   +S  G+ + F   SG+++  
Sbjct: 7   RQFEFISKSDPDTGARVTRLSPAD----TACHRTYFYQKCFSNDGNQLVFGARSGDEWHY 62

Query: 374 GVMKKDGSQERLLVEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +         L +       T+    SP  R L F R +      +L ++    + E 
Sbjct: 63  HRLDLQTRVATQLTDQPGEN--TFGGFLSPDDRFLYFVRAERELIRLELATL----KEEC 116

Query: 430 LINTPA-YASDPQWVG 444
           +   P+ +     WV 
Sbjct: 117 VYTVPSDWVGYGTWVA 132



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 28/245 (11%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGKRAL 273
           ++  FS +  ++ +      D    + +D +  R   ++ +         F S + +   
Sbjct: 39  YQKCFSNDGNQLVFGA-RSGDEWHYHRLDLQT-RVATQLTDQPGENTFGGFLSPDDRFLY 96

Query: 274 ISVQKDEAMDI----------YSVDLQS-NATERLTNTL-----FINI-SASYSPDSSQI 316
               + E + +          Y+V          + N+       I I  A + P +   
Sbjct: 97  FVRAERELIRLELATLKEECVYTVPSDWVGYGTWVANSACTKMVGIEILGADWFPLTDWK 156

Query: 317 VFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF--- 371
            F      K +  +++ +  +  + +  +++     P + P     +AF           
Sbjct: 157 KFGEMFHSKPRCRLIRIDLLTGARAVIHEEKLWLGHPQYRPFDDKTVAFCHEGTHDLIDA 216

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +  + +DGS  R   E    ++ T   W P G +++F     G +   + S+D      
Sbjct: 217 RMWFVNEDGSNLRCGKEHDQGESCTHEFWVPDGSAMVFVSYFKGRSERAMCSLDPVTLQT 276

Query: 429 TLINT 433
            ++ T
Sbjct: 277 RVLTT 281


>gi|149922647|ref|ZP_01911075.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Plesiocystis pacifica SIR-1]
 gi|149816533|gb|EDM76030.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Plesiocystis pacifica SIR-1]
          Length = 704

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 50/247 (20%), Positives = 93/247 (37%), Gaps = 27/247 (10%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-----GANIRYLTPSRDQI 213
           +D +Y     E     S+I +++ S         L V+D +     GA+ + +  S +  
Sbjct: 181 ADYVYGYGLSED---RSQIAYLARSGQKAPYSTCLRVLDANDPKAEGADKKIVCDSPELS 237

Query: 214 LFE--PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS---- 267
                PRFSP+ Q+V +A   D D  +  +++  + R  +R     +    PR S     
Sbjct: 238 FTWSSPRFSPDGQQVYFAALADGDRKQGQIVEVDL-RKQRRFAKVITDAKVPRSSPNILH 296

Query: 268 ---NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
              +G+  L +       D+Y    ++  T RLT      + A  + D + ++      G
Sbjct: 297 GWVDGEHLLYTANDAGFGDLYKWSRKTRKTARLTKHGDALLGAE-ALDGAVVLAHGTPAG 355

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                V   +G    R       S  D      GD + + + +  K    V + + +Q R
Sbjct: 356 STVDVVSTEDGKVLGRAEVAGRVSLLDGH----GDRLVWAEVAPNK----VYEANIAQVR 407

Query: 385 LLVEDSN 391
           +  + S 
Sbjct: 408 ITKDSSG 414



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 62/171 (36%), Gaps = 31/171 (18%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +    +  VD    +   +T       +A +         +++ + +  L+ M  +  D 
Sbjct: 119 EGGAAVTEVDWSKRSLWSVTPHP--ETNALWLHA------DANNDERMNLWRMDLSPEDP 170

Query: 339 -----KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---------KKDGSQER 384
                ++I+       +    S     IA+   SG+K               K +G+ ++
Sbjct: 171 AERVPEQITTADY--VYGYGLSEDRSQIAYLARSGQKAPYSTCLRVLDANDPKAEGADKK 228

Query: 385 LLVED----SNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRNETL 430
           ++ +         +P +SP G+ + F+   DGD    ++  +DL  R +  
Sbjct: 229 IVCDSPELSFTWSSPRFSPDGQQVYFAALADGDRKQGQIVEVDL--RKQRR 277



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 41/108 (37%), Gaps = 9/108 (8%)

Query: 306 SASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-------Q 357
           S  +SPD  Q+ F +  +G ++Q  +++ +   Q+R ++        P  SP        
Sbjct: 242 SPRFSPDGQQVYFAALADGDRKQGQIVEVDLRKQRRFAKV-ITDAKVPRSSPNILHGWVD 300

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           G+ + +T        +    +   +   L +  +      +  G  ++
Sbjct: 301 GEHLLYTANDAGFGDLYKWSRKTRKTARLTKHGDALLGAEALDGAVVL 348


>gi|146312934|ref|YP_001178008.1| oligogalacturonide lyase [Enterobacter sp. 638]
 gi|145319810|gb|ABP61957.1| Oligogalacturonide lyase [Enterobacter sp. 638]
          Length = 375

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 71/203 (34%), Gaps = 41/203 (20%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R + H     IY+        F+   +          I   + +++ DG+N+R +     
Sbjct: 187 RWLGH----PIYR-------PFDDNTVAFCHEGPRDAIDARMWLINEDGSNLRKVRQHAP 235

Query: 212 QILFEPR-FSPNQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              F    + P+   + Y  + + D  R ++  D       + +       L   F  NG
Sbjct: 236 GESFTHEFWVPDGSALYYVAHKENDPQRYLFSADPHSLDNRQLMAIPPCSHLMSNF--NG 293

Query: 270 KRALISVQKDEAMD-----------IYSVDLQSNATERL----TNTLFINIS-------A 307
            + +     D A             I+  D+ +   + +    T+   ++          
Sbjct: 294 SQIV----GDGAPHNTGDINLNDPFIWVFDIAAGTQKAICQHNTSWKVLDGDRQVTHPHP 349

Query: 308 SYSPDSSQIVFESDREGKEQLYV 330
           S+SPD+  +++ SD EG   LY+
Sbjct: 350 SFSPDNKWVLYTSDEEGMPALYL 372



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/273 (9%), Positives = 77/273 (28%), Gaps = 43/273 (15%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V   V    +     V + D   +  +   +        +S       +  +        
Sbjct: 115 VVYEVDDEWVAYGTWVANSDCTKLVGIEIKKSDWQPLTDWSK------FRAFYFTQPECR 168

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEAM---DIYSVDLQSNATE 295
            +        P+ I   +  +  P +   +        +         ++ ++   +   
Sbjct: 169 LINIDLCTGEPRVILQEKRWLGHPIYRPFDDNTVAFCHEGPRDAIDARMWLINEDGSNLR 228

Query: 296 RLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASYFD 351
           ++             + PD S + + + +E   Q Y+  ++    D +++      S+  
Sbjct: 229 KVRQHAPGESFTHEFWVPDGSALYYVAHKENDPQRYLFSADPHSLDNRQLMAIPPCSHLM 288

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKK--------DGSQE---------------RLLVE 388
             +   G  I           I +            G+Q+               R +  
Sbjct: 289 SNF--NGSQIVGDGAPHNTGDINLNDPFIWVFDIAAGTQKAICQHNTSWKVLDGDRQVTH 346

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 P++SP  + ++++  ++G     L ++
Sbjct: 347 P----HPSFSPDNKWVLYTSDEEGMPALYLCAV 375



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 85/253 (33%), Gaps = 35/253 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F+ +  K+ +    +      YL+D     A +              S + K 
Sbjct: 35  NYFYQKCFTQDGSKIIFGGAFEGH-WNYYLLDIEKQHATQLTEGAGDNTFGGFLSDDDKS 93

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL-------------------TNTLFINISAS-YSP 311
                    + ++  VDL+S     +                   T  + I I  S + P
Sbjct: 94  VWYVKN---SRELRRVDLESFEEHVVYEVDDEWVAYGTWVANSDCTKLVGIEIKKSDWQP 150

Query: 312 DSSQIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
            +    F +    + +  ++  +    + + I Q+K      P++ P   + +AF     
Sbjct: 151 LTDWSKFRAFYFTQPECRLINIDLCTGEPRVILQEKRW-LGHPIYRPFDDNTVAFCHEGP 209

Query: 369 EKF---AIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  + ++ +DGS  R + +     +     W P G +L +   K+ D    L+S D
Sbjct: 210 RDAIDARMWLINEDGSNLRKVRQHAPGESFTHEFWVPDGSALYYVAHKENDPQRYLFSAD 269

Query: 423 LNG-RNETLINTP 434
            +   N  L+  P
Sbjct: 270 PHSLDNRQLMAIP 282


>gi|148657487|ref|YP_001277692.1| protein kinase [Roseiflexus sp. RS-1]
 gi|148569597|gb|ABQ91742.1| protein kinase [Roseiflexus sp. RS-1]
          Length = 1330

 Score = 60.0 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 81/230 (35%), Gaps = 20/230 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            S     ++ + D       +     D+ +    FSP+ + + +  Y+      + + D R
Sbjct: 976  SASFDKTMRLWDVKRGICLHTLNIPDKTINSVAFSPSGEYIVFGGYET-----MQMWDVR 1030

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +   R+  +   + A  FS +G+  +     D  + ++ V         L        
Sbjct: 1031 KWKCI-RVFRYEKRVDAVAFSPDGRYVVSGGWDDATIRLWEVQ-TGRCVCILEGHEGAIT 1088

Query: 306  SASYSPDSSQIVFESDREGKEQLY------VMQSNGSDQKRISQDKEASYFDPV----WS 355
            S +  PD   I+  S  +   +L+       +  + +  K +          PV    +S
Sbjct: 1089 SVAVRPDGYYILSCSY-DHTVRLWDVCKGVCVYVDETHMKSLPHPLGGEIDVPVNSVSFS 1147

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            P G   A +  +     I  ++ +G     L    ++ +  + P+GR ++
Sbjct: 1148 PDGKH-AVSAGTDGMMRIWNIE-NGKTLSQLRCKDSITSVVFHPNGRFIL 1195



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 78/239 (32%), Gaps = 27/239 (11%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                  +  ++    SP  + +  A++D      + L D +       +      I +  
Sbjct: 953  QTLIGHNFWVWSVAASPCGRYILSASFDK----TMRLWDVKRGICLHTLNIPDKTINSVA 1008

Query: 265  FSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G+  +         +   + D++     R+        + ++SPD   +V  S   
Sbjct: 1009 FSPSGEYIVF-----GGYETMQMWDVRKWKCIRVFRYEKRVDAVAFSPDGRYVV--SGGW 1061

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-----K 378
                + + +        I +  E +       P G  I    +        V K      
Sbjct: 1062 DDATIRLWEVQTGRCVCILEGHEGAITSVAVRPDGYYILSCSYDHTVRLWDVCKGVCVYV 1121

Query: 379  DGSQERLLVE--DSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            D +  + L       +  P    ++SP G+    +     D   ++++I+ NG+  + +
Sbjct: 1122 DETHMKSLPHPLGGEIDVPVNSVSFSPDGKH---AVSAGTDGMMRIWNIE-NGKTLSQL 1176



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 85/261 (32%), Gaps = 45/261 (17%)

Query: 113 TGRVIKEG---KDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
           TG +         R  +        RLWDV   + +  + F         +A        
Sbjct: 624 TGAITCAAFSQDGRYILSGSHDCTVRLWDVATGECL--RVFKGHTEKVTSVA-------- 673

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPN 222
                    F+    +++    SG   ++L + D  DG++I  +    +       FSPN
Sbjct: 674 ---------FDIGRQYIA----SGSTDHTLKIWDIHDGSSIHTIEHEGEVSCVG--FSPN 718

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              +            ++  D +  R    +      I +  F+++G   L+       +
Sbjct: 719 GGYLVSGMDGLLTKSPIFFWDAKSGRHLYALERHEGGITSMAFTASGHFLLLGTNV-GTI 777

Query: 283 DIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           +++  DL +   +R   +   +  +S S  P   + +  S +   + +Y           
Sbjct: 778 ELW--DLTTKNCQRTLQSFESWPVVSVSVHPKGDRAL--SCQG--DSIYYWNLQTGACI- 830

Query: 341 ISQDKEASYFDPVWSPQGDLI 361
           + +D E        SP G  I
Sbjct: 831 LKKDSEWFVASIAISPDGRFI 851



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 62/187 (33%), Gaps = 13/187 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS + +       D    L + +++    R+ + I      I    FS +G   L S  +
Sbjct: 550 FSKDGKYP-----DVRRTLELAMLNLPDVRSLRNIKGHAEKITCVSFSPDGNFLL-SGSE 603

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + ++  D        L         A++S D   I+  S       + +      + 
Sbjct: 604 DNTLRLW--DWLGTCKRILKGHTGAITCAAFSQDGRYILSGSH---DCTVRLWDVATGEC 658

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            R+ +          +      IA +  +     I  +  DGS    +  +  +    +S
Sbjct: 659 LRVFKGHTEKVTSVAFDIGRQYIA-SGSTDHTLKIWDIH-DGSSIHTIEHEGEVSCVGFS 716

Query: 399 PSGRSLI 405
           P+G  L+
Sbjct: 717 PNGGYLV 723



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 71/266 (26%), Gaps = 59/266 (22%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   N+L + D  G   + +       +    FS + + +   ++D      V L D  
Sbjct: 600 SGSEDNTLRLWDWLGT-CKRILKGHTGAITCAAFSQDGRYILSGSHD----CTVRLWDVA 654

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +        + +  F   G++ + S   D  + I+  D+   ++           
Sbjct: 655 TGECLRVFKGHTEKVTSVAFD-IGRQYIASGSTDHTLKIW--DIHDGSSIHTIEHEGEVS 711

Query: 306 SASYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              +SP+   +V  S  +G   K  ++   +         +  E       ++  G  + 
Sbjct: 712 CVGFSPNGGYLV--SGMDGLLTKSPIFFWDAKSGRHLYALERHEGGITSMAFTASGHFLL 769

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-------AP-------------------- 395
                G    I +        +  ++             P                    
Sbjct: 770 LGTNVGT---IELWDLTTKNCQRTLQSFESWPVVSVSVHPKGDRALSCQGDSIYYWNLQT 826

Query: 396 ----------------TWSPSGRSLI 405
                             SP GR ++
Sbjct: 827 GACILKKDSEWFVASIAISPDGRFIL 852


>gi|296191129|ref|XP_002743522.1| PREDICTED: WD repeat-containing protein 5-like [Callithrix jacchus]
          Length = 503

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 96/271 (35%), Gaps = 19/271 (7%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            H       +++  E+    +       +  S   ++    +  +   +++      + +
Sbjct: 159 IHIPCVTSVRAMATEEKKPETEAARAQPTPSSSATQSKPTPVKPN-YALKFTLAGHTKAV 217

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
              +FSPN + +A ++ D      + +      +  K I   +  I    +SS+    L+
Sbjct: 218 SSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGISDVAWSSD-SNLLV 272

Query: 275 SVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           S   D+ + I+  D+ S    + L          +++P S+ IV  S     E + +   
Sbjct: 273 SASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF---DESVRIWDV 327

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-- 391
                 +             ++  G LI  + + G    I      G   + L++D N  
Sbjct: 328 KTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASGQCLKTLIDDDNPP 385

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +    +SP+G+ ++ +     D   KL+   
Sbjct: 386 VSFVKFSPNGKYILAATL---DNTLKLWDYS 413


>gi|291569427|dbj|BAI91699.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 1151

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 95/248 (38%), Gaps = 28/248 (11%)

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             +   DG  +  +  +  +      F+P+   +A +   +  + ++  +          +
Sbjct: 862  YLRKTDGQ-LLSIIRNSGKTSRAVAFTPDADILALSANYEVQLWQITNITKSPPELLTIL 920

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY---- 309
               +++I     S +G+    +   D+ + ++++  +      L N+ + +    +    
Sbjct: 921  TGHKALIYTIAISPDGQMVAAAGD-DKTIKLWTIQGE------LINSFWAHNERIWRLAF 973

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +PD   ++  S+ +   +L+            + +++   +    +PQG+LIA       
Sbjct: 974  APDGQTLISASE-DQTVKLWT----TEGVLVNTLNQDGVIWGVDINPQGNLIASASRDDT 1028

Query: 370  KFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             F +   + DG+  R ++     L    +SP G+++        +   KL+  +L G  E
Sbjct: 1029 -FKLW--RLDGTLVRTIIANSGGLTRVAFSPDGQNIA---TAGVNNQVKLW--NLEG--E 1078

Query: 429  TLINTPAY 436
             L   P +
Sbjct: 1079 LLRTLPGH 1086


>gi|110644032|ref|YP_671762.1| hypothetical protein ECP_3890 [Escherichia coli 536]
 gi|110345624|gb|ABG71861.1| hypothetical protein ECP_3890 [Escherichia coli 536]
          Length = 404

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 70/203 (34%), Gaps = 41/203 (20%)

Query: 253 IGNFRSMILAPRFSSNGKRA--LISVQKDEAMDIYSV----DLQSNAT-----------E 295
           +GN     +    S  G++   L  V+  +    + V     L    T            
Sbjct: 211 VGNHALAFIGDTLSPKGEKVPELFIVELPQDEAGWKVAGDAPLSGTETTLPAPPRGVVQR 270

Query: 296 RLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT T        +NI   +   +P  +QI F   D  G  QL+++   G + ++++ +K
Sbjct: 271 RLTFTHHRIYPGLVNIPRHWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNK 330

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSG 401
                   W P G+ + F   +     I        +   L E      +  A  +SP G
Sbjct: 331 TDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDG 386

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN 424
           + L +          +L+  + +
Sbjct: 387 QWLAWMED------GQLWITETD 403



 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 403



 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 5/104 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 305 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            ++   +   N  S   A  FS +G+       +D  + I   D
Sbjct: 363 EVEYLTENHANPPSAD-AVVFSPDGQWLAW--MEDGQLWITETD 403


>gi|302846112|ref|XP_002954593.1| hypothetical protein VOLCADRAFT_95446 [Volvox carteri f. nagariensis]
 gi|300260012|gb|EFJ44234.1| hypothetical protein VOLCADRAFT_95446 [Volvox carteri f. nagariensis]
          Length = 1873

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 72/222 (32%), Gaps = 22/222 (9%)

Query: 182  ESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
              VVSG     +CV ++D  N  + L  +  + +     S +   +A    DD+      
Sbjct: 831  NRVVSGDNHGMICVWEKDSGNPVQTLPLAHSKAVLSVTISADGSTIASVGADDKARGSTR 890

Query: 241  LMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +    +D   + +    ++   P    FS +G +  ++   +  + +++V         +
Sbjct: 891  VSIWNVDIGIELVSLTAAVESHPLYCSFSPDGNKLAVTES-NGNVMVWNV-AAGCQWYMI 948

Query: 298  TN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWS 355
                       S+S D  +  F +   G + +  +    S       + K         S
Sbjct: 949  YQAHKGKVTGCSWSADCRK--FTTC--GTDSVAAIWDAESGAPLFKFNLKAGPLTSCSVS 1004

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            P G  +A    +G            S   L     N   P++
Sbjct: 1005 PSGLYVAAGSTTGTL----------SVSNLATAARNTPEPSF 1036



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 51/323 (15%), Positives = 101/323 (31%), Gaps = 40/323 (12%)

Query: 130 LWDVKDRKQI--------IGKKFFSSPASWRKIA---------HTISDDIYQSITGEKGD 172
           +WDV    +I            F S P  +R            H     +   +T +   
Sbjct: 635 VWDVSSATKIRVFDFVMDKAGDFKSPPHPYRWAVAHNSTVLFDHESEALVLDMLTIDDPL 694

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
             S  L   +++ SG     L V    G++      +    +    FS + + V      
Sbjct: 695 LRSYYLSDVQTIASGFNHRKLLVWSAAGSSAPDKFHTTHDAITSTHFSNDDRLVV---MG 751

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +D   V       +     +G+        + S++ +  L S   D  + ++  D +  
Sbjct: 752 TQDGNVVVYDVVHGETVEIIVGHQNGPCRCVKLSADNREVL-SCGADSKVVLW--DWRKR 808

Query: 293 ATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYF 350
           +  R+ +  FI+I     S   +++V   D  G   + V + +  +  + +      +  
Sbjct: 809 SPLRIYSGHFISIGCCDMSMQGNRVV-SGDNHG--MICVWEKDSGNPVQTLPLAHSKAVL 865

Query: 351 DPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSL 404
               S  G  IA             + +   D   E + +  +    P   ++SP G  L
Sbjct: 866 SVTISADGSTIASVGADDKARGSTRVSIWNVDIGIELVSLTAAVESHPLYCSFSPDGNKL 925

Query: 405 IFSRKKDG------DTGSKLYSI 421
             +             G + Y I
Sbjct: 926 AVTESNGNVMVWNVAAGCQWYMI 948



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 83/235 (35%), Gaps = 28/235 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +  VVSG    S+ +   D         ++D+ + + +F+ + QK+           RVY
Sbjct: 326 ATRVVSGGEDCSVRLWSLDDGKQLLCFQAQDEPIKQVQFASSGQKILSCDVTG----RVY 381

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +     +     +  +   I A   S++  +  +    +  + ++ V+ + +  E  T+ 
Sbjct: 382 VWSMHAEFLTNLMRRYADNISACAMSND-MKLCLVGCNNGRVMLWDVERRESVWEY-THH 439

Query: 301 LFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
               + A        + F S R+         ++ ++ S+   Q       E       +
Sbjct: 440 TGR-VEA--------VAFNSMRDMCATAGADGRIVLLFSDSGKQANSFLGAEEPMMTVQF 490

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQER----LLVEDSNLQAPTWSPSGRSLI 405
           SP  + IA     G    + +    GS  +    L    + +    WSP+ + + 
Sbjct: 491 SPDDERIAGCAADG---KLYLYTTAGSTRKPKAVLRSSVARISNHVWSPNSKLVA 542


>gi|294626212|ref|ZP_06704817.1| dipeptidyl peptidase IV [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292599477|gb|EFF43609.1| dipeptidyl peptidase IV [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 827

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 57/393 (14%), Positives = 108/393 (27%), Gaps = 98/393 (24%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V      R R+  R  D                A  R         +Y     E G    
Sbjct: 173 VKVTADGRYRLNVR--DTA----------VVCDAGAR------CSKLYAKDKPEPG---- 210

Query: 176 RILFVSESVVSGIIKNSLCVMD----------RDG-ANIRYLTPSRDQILFEPR---FSP 221
            +L   +   + I   +L V D          RDG  N  Y T +      +     +SP
Sbjct: 211 -VLSPDKRSEAFIRDWNLWVRDLASGRETQLTRDGVENFGYATDNAGWQHTDNAVVAWSP 269

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKR----------------------------- 252
           + +K+A    D      +YL+ T++     +                             
Sbjct: 270 DSRKIATFQQDQRKTGDMYLVSTKLGHPELQAWKYPLAGDKDVTMIERVIIDVPTRSVLR 329

Query: 253 ---------------IGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATE 295
                          +     +     ++ + K      + +  +   +   D  + A  
Sbjct: 330 LKTPPDQHRSTLCDDVSCSPGLWDDVNWAPDSKTLAFASTSRFHKQTWLRIADASTGAVR 389

Query: 296 ------RLTNTLFINISASYS--PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                   T      ++A+++  P  ++ V+ S+R    QLY+        KR     + 
Sbjct: 390 TAFDETVKTYYESGQVAANWAYLPARNEAVWFSERSDWGQLYLYDLATGKPKRAITTGQG 449

Query: 348 SYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           +  + +        A+    G           +  +  DG +  LL  +    +   SP 
Sbjct: 450 NVTELLRVDPVTRTAWFVGVGRSAGVDPYYQQLWKVSLDGGEPVLLTPEPANHSIALSPD 509

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G   + +          L     +GR  + I T
Sbjct: 510 GARFVDTYSTSVTPPVTLLREAGDGRTVSTIAT 542


>gi|321462600|gb|EFX73622.1| hypothetical protein DAPPUDRAFT_200500 [Daphnia pulex]
          Length = 430

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 75/228 (32%), Gaps = 17/228 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                    Q  +  RF  + +++ +AT      +R++  D    R    + +    +  
Sbjct: 121 PESQLADPPQRQYWTRFDFSNKELVFATGHVNGRVRIW--DVYTGRKLLELMDHTQAVRD 178

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             F+ +G   L++   D  + ++ +    N  + L           +SP++  +      
Sbjct: 179 LAFAPDGSLRLVTASLDRTIKVWDLRDDGNMFKTLKGHSNEIFWCCWSPNAQLLA---SA 235

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              + + V         R       +     +SP G ++A + +      I      G +
Sbjct: 236 GIGKSIMVWDMVTYSLARTLTGHHHNVSACEFSPDGAILASSSWDTR--VILWDPYTGEE 293

Query: 383 ERLLVEDSNLQAPTWS--PSGRS---LIFSRKKDGDTGSKLYSIDLNG 425
            R L        P ++   +G     + ++R      G +  +I  +G
Sbjct: 294 LRELCHQYPPPRPIFASGANGSWVRGVAYARN-----GGQTATISDDG 336



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 107/327 (32%), Gaps = 62/327 (18%)

Query: 57  SIDELGGKV-SEVVSKDLQRSDVFNLISQDSFKQKITNP--DSIPRFQDWN--SLGAQVL 111
           + D+ G ++  +VVS D   +   + ++   F            P+ Q W       + L
Sbjct: 90  NTDDEGNEIKGQVVSID---TG--SPVNSAGFGSGTPESQLADPPQRQYWTRFDFSNKEL 144

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           V           +    R+WDV   ++++  +      + R +A               G
Sbjct: 145 VF------ATGHVNGRVRIWDVYTGRKLL--ELMDHTQAVRDLA-----------FAPDG 185

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
                    S  +V+  +  ++ V D RD  N+          +F   +SPN Q +A A 
Sbjct: 186 ---------SLRLVTASLDRTIKVWDLRDDGNMFKTLKGHSNEIFWCCWSPNAQLLASAG 236

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                   + + D       + +      + A  FS +G   L S   D  + ++  D  
Sbjct: 237 IGK----SIMVWDMVTYSLARTLTGHHHNVSACEFSPDGA-ILASSSWDTRVILW--DPY 289

Query: 291 SNA----------TERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +              R       N S     +Y+ +  Q    SD +G  + + +     
Sbjct: 290 TGEELRELCHQYPPPRPIFASGANGSWVRGVAYARNGGQTATISD-DGLIRFWNLLEPEV 348

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAF 363
           D   I+Q  E       +SP G + A 
Sbjct: 349 DPSAIAQGDE-EMVCCTFSPSGRVFAV 374


>gi|57525219|ref|NP_001006198.1| WD repeat-containing protein 5 [Gallus gallus]
 gi|53133636|emb|CAG32147.1| hypothetical protein RCJMB04_18o16 [Gallus gallus]
          Length = 334

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKALKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 148 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 202

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|85713186|ref|ZP_01044216.1| Dipeptidyl peptidase IV [Idiomarina baltica OS145]
 gi|85692984|gb|EAQ30952.1| Dipeptidyl peptidase IV [Idiomarina baltica OS145]
          Length = 747

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 62/199 (31%), Gaps = 49/199 (24%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMD-------------------------TRIDRAPKR 252
           RFSP+ Q++ Y     +D     L                                  +R
Sbjct: 47  RFSPDGQRLTYLKGRADDASHYDLWSYNLATEKHQRLVNADDVFAGEEVLSDEEKARRER 106

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +    S I++ ++S+     L  +  D    +Y   L++    ++T+T      A  SP 
Sbjct: 107 LRLSGSGIVSYQWSAQSDALLFPLAGD----VYYYSLETGKARQITHTEAFETDAKLSPQ 162

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS----------------YFDPVWSP 356
              + +  +    + LYV       ++ I++  + +                     WSP
Sbjct: 163 GHYVSYIRE----QNLYVYSLETGTEQAITRSGKDTIKYGMAEFVAQEEIDRMTGYWWSP 218

Query: 357 QGDLIAFTKFSGEKFAIGV 375
               IA T+       I V
Sbjct: 219 NERKIALTRVDESPVDIAV 237



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 63/191 (32%), Gaps = 56/191 (29%)

Query: 264 RFSSNGKRALI-SVQKDEA--MDIYSVDLQSNATERLTN--------------------- 299
           RFS +G+R      + D+A   D++S +L +   +RL N                     
Sbjct: 47  RFSPDGQRLTYLKGRADDASHYDLWSYNLATEKHQRLVNADDVFAGEEVLSDEEKARRER 106

Query: 300 ----TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                  I +S  +S  S  ++F         +Y         ++I+   EA   D   S
Sbjct: 107 LRLSGSGI-VSYQWSAQSDALLFPL----AGDVYYYSLETGKARQITH-TEAFETDAKLS 160

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQAPTW 397
           PQG  +++ +       + V   +   E+ +                       +    W
Sbjct: 161 PQGHYVSYIREQ----NLYVYSLETGTEQAITRSGKDTIKYGMAEFVAQEEIDRMTGYWW 216

Query: 398 SPSGRSLIFSR 408
           SP+ R +  +R
Sbjct: 217 SPNERKIALTR 227



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 57/394 (14%), Positives = 117/394 (29%), Gaps = 82/394 (20%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
           +   I  +Q W++  +  L+         D     +   +    +QI   + F + A   
Sbjct: 110 SGSGIVSYQ-WSAQ-SDALLF----PLAGDVY---YYSLETGKARQITHTEAFETDAKLS 160

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
              H +S  I +             ++  E+     I  S     + G          D+
Sbjct: 161 PQGHYVS-YIREQNL---------YVYSLETGTEQAITRSGKDTIKYGMAEFVAQEEIDR 210

Query: 213 ILFEPRFSPNQQKVAYATYDDEDI-----LRVYLMDTRIDRAPKRIGNFRSM-----ILA 262
           +     +SPN++K+A    D+  +       +Y     +           ++     ++ 
Sbjct: 211 MTGY-WWSPNERKIALTRVDESPVDIAVRSEIYADHIDMIEQRYPFAGTPNVDIDLGVVD 269

Query: 263 PRFSS-----------------NGKRALISVQKDEAMDIYSVDLQSNATERL-------- 297
             FS                  +G  A +   KD     +S   QS   +RL        
Sbjct: 270 VDFSGADNLESGIKWLGLDELGDGYLARVKWLKD--SQRFSYQWQSRDQQRLDLHMVDVN 327

Query: 298 -TNTLFI--NISASYS---------PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            T    I    S S+           D+   ++ S+R G + LY+ + +G   ++++   
Sbjct: 328 DTADNVILTETSDSWVNLNDDLYFLDDNKHFIWASERSGYKHLYLYRVDGGLIRQLTSGD 387

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-----KDGSQERLLVEDSNLQAPTWSPS 400
                      +  +  FT        + + +        +    + E   +    ++  
Sbjct: 388 WQVDELAAIDEKTGVFYFTGREKSPLELHLYRNQLNTTSPATPSRITEQEGMHHIQFAAD 447

Query: 401 GRSLI--FSRKKDGDTGSKLYSIDLNGRNETLIN 432
           G S +  F   K          I LNG     + 
Sbjct: 448 GSSYVDTFESYKQPPQ------ISLNGPTGKRLT 475


>gi|27366813|ref|NP_762340.1| WD40 repeat-containing protein [Vibrio vulnificus CMCP6]
 gi|27358380|gb|AAO07330.1| FOG: WD40 repeat protein [Vibrio vulnificus CMCP6]
          Length = 944

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 8/141 (5%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEAS-YFDPVWSPQGDLI-A 362
           SA + PD  + +      G  +L++M +   +  ++I Q            S  G  I A
Sbjct: 404 SAKWLPDGQRYLATRKVNGLSELWLMDAQQPEIGQQIWQGTIGDVLGGFAVSHDGRFIVA 463

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             K S E + +        Q   L +   ++ +P ++  G  ++FS   DG     +YS+
Sbjct: 464 SVKRSSEGWNLEKFDLAALQWTPLTQSRAVENSPAFTSDGE-VLFSADYDG--VFNIYSL 520

Query: 422 D-LNGRNETLINTPAYASDPQ 441
           D ++G  + L      A  PQ
Sbjct: 521 DIVSGEIKQLTREVGGAFTPQ 541



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 68/170 (40%), Gaps = 16/170 (9%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIK----NSLCVMDRDGANI--RYLTPSRDQI 213
           DD +Q++T EK  F S              K    + L +MD     I  +    +   +
Sbjct: 390 DDRWQALT-EKQRFRSAKWLPDGQRYLATRKVNGLSELWLMDAQQPEIGQQIWQGTIGDV 448

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           L     S + + +  +     +   +   D    +    +   R++  +P F+S+G   L
Sbjct: 449 LGGFAVSHDGRFIVASVKRSSEGWNLEKFDLAALQ-WTPLTQSRAVENSPAFTSDG-EVL 506

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ---IVFES 320
            S   D   +IYS+D+ S   ++LT      +  +++P + +    V++S
Sbjct: 507 FSADYDGVFNIYSLDIVSGEIKQLTR----EVGGAFTPQTRRDSGFVYQS 552


>gi|307555829|gb|ADN48604.1| putative ATP/GTP-binding protein [Escherichia coli ABU 83972]
          Length = 404

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G +  +++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPHQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +          +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWMED------GQLWITETD 403



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPHQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWMED----GQLWITETD 403



 Score = 43.5 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 8/114 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I F+            L ++   G     LT ++  I     + P+ + + +    D 
Sbjct: 298 TQIAFLM---RDDNGIVQLWLISPQGGEPHQLTHNKTDIQSAFNWHPSGEWLGFVL--DN 352

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            I   +     ++   +   N  S   A  FS +G+       +D  + I   D
Sbjct: 353 RIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW--MEDGQLWITETD 403


>gi|255935533|ref|XP_002558793.1| Pc13g03560 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583413|emb|CAP91425.1| Pc13g03560 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 713

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 67/196 (34%), Gaps = 18/196 (9%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D D ++   L   + +    PR +     + Y    D     V +        PK I   
Sbjct: 222 DYDISSNGKLVAFKSKAPELPRANHTASYI-YVVPHDGSKKAVAINGPDSPGTPKDI--- 277

Query: 257 RSMILAPRFSSNGKRALI-----SVQKDEAMDIYSVDLQSNATERLTNTLFINISA---S 308
           +    +P FS +G+R           + +   +Y   + S  T R T     + S     
Sbjct: 278 KGDSSSPVFSPDGRRIAYLQMEDISYESDRRTVYVYTIDSKDTIR-TLAKDWDRSPGAIK 336

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFTK 365
           ++ D   +V  ++   + +L+++ ++  D    K  +     + +  +  P G+ +  + 
Sbjct: 337 WTADGKSLVLNTEDSARSRLFLLPADAGDDFKPKNFTDGGSVAAYYGL--PNGEYLVSSS 394

Query: 366 FSGEKFAIGVMKKDGS 381
                  +   K D  
Sbjct: 395 AIHTSRTVYTAKPDEG 410



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 76/255 (29%), Gaps = 33/255 (12%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V+  + S  I +S+ V   D              L + R  P     AY +      L  
Sbjct: 147 VAAPLSSARIHDSIYVRHWDTWLTTRFNAIFSGTLKKKRAGP-GATSAYTSSGSLKNLVA 205

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSN 292
            + +      P               SSNGK      +  E          IY V    +
Sbjct: 206 GVKNLESPYPP------FGDASDYDISSNGKLVAFKSKAPELPRANHTASYIYVVPHDGS 259

Query: 293 ATERLTNTL----------FINISASYSPDSSQIVF-----ESDREGKEQLYVMQSNGSD 337
                 N              + S  +SPD  +I +      S    +  +YV   +  D
Sbjct: 260 KKAVAINGPDSPGTPKDIKGDSSSPVFSPDGRRIAYLQMEDISYESDRRTVYVYTIDSKD 319

Query: 338 QKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ---ERLLVEDSNLQ 393
             R +++D + S     W+  G  +        +  + ++  D       +   +  ++ 
Sbjct: 320 TIRTLAKDWDRSPGAIKWTADGKSLVLNTEDSARSRLFLLPADAGDDFKPKNFTDGGSVA 379

Query: 394 APTWSPSGRSLIFSR 408
           A    P+G  L+ S 
Sbjct: 380 AYYGLPNGEYLVSSS 394



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 24/126 (19%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFA-------IGVMKKDGSQERLLVED------ 389
                   D   S  G L+AF   + E          I V+  DGS++ + +        
Sbjct: 214 YPPFGDASDYDISSNGKLVAFKSKAPELPRANHTASYIYVVPHDGSKKAVAINGPDSPGT 273

Query: 390 -----SNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDP- 440
                 +  +P +SP GR + + + +D    S    +Y   ++ ++        +   P 
Sbjct: 274 PKDIKGDSSSPVFSPDGRRIAYLQMEDISYESDRRTVYVYTIDSKDTIRTLAKDWDRSPG 333

Query: 441 --QWVG 444
             +W  
Sbjct: 334 AIKWTA 339


>gi|328869425|gb|EGG17803.1| WD repeat protein [Dictyostelium fasciculatum]
          Length = 819

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 77/233 (33%), Gaps = 21/233 (9%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             L       ++  RFS N +++A  + D+  I+          R PK I          
Sbjct: 358 FTLKDRHSDEVWFVRFSNNGKRLASCSKDNSIIIWDMNEYYDKGREPKIIHTLTGHTKEV 417

Query: 264 ---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S + K  + S   D  + ++SVD      +       +  S ++ PD  + V   
Sbjct: 418 GYLSWSPDDKNIV-SASSDHNVKLWSVD-SGVCVKTYAKHTDVVTSVAWHPDGKRFV--- 472

Query: 321 DREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSP-----QGDLIAFTKFSGEKFAIG 374
              G ++ +Y+  +   +   +      S+     +       G  +       +K  + 
Sbjct: 473 -SGGNDKFIYLWNAATVETASMVSTPVRSWQCARVNDLGIHKDGKQLVVICQE-KKIRLY 530

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            +  + + E  + E   + +   S   R  +        +  +++  DL  R 
Sbjct: 531 DIDNEKTPETSIPETEAITSMELSNDSRFALV-----NTSNQEIHLWDLEKRT 578



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 78/246 (31%), Gaps = 18/246 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++VS    +++ +   D             ++    + P+ ++         +   +YL
Sbjct: 427 KNIVSASSDHNVKLWSVDSGVCVKTYAKHTDVVTSVAWHPDGKRFV----SGGNDKFIYL 482

Query: 242 MDTRIDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            +         +          R        +GK+ ++ + +++ + +Y +D +      
Sbjct: 483 WNAATVETASMVSTPVRSWQCARVNDLGIHKDGKQLVV-ICQEKKIRLYDIDNEKTPETS 541

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +  T  I  S   S DS    F       +++++         +  +      F      
Sbjct: 542 IPETEAI-TSMELSNDSR---FALVNTSNQEIHLWDLEKRTIIQKYRGMRQGRFVIRSCF 597

Query: 357 QGDLIAFTKFSGEKFAIGVMK-KDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            G    F     E   I +    +G+    L      + +  WSP+   L  S     D 
Sbjct: 598 GGADQTFIISGSEDSKIYIWNRLNGTLLETLSGHFGTVNSVHWSPTDPYLFCSASD--DQ 655

Query: 415 GSKLYS 420
             K+++
Sbjct: 656 SIKIWT 661



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 31/83 (37%), Gaps = 5/83 (6%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I +      + +    +SP+ + +  A+ D      V L         K       ++ +
Sbjct: 406 IIHTLTGHTKEVGYLSWSPDDKNIVSASSDH----NVKLWSVDSGVCVKTYAKHTDVVTS 461

Query: 263 PRFSSNGKRALISVQKDEAMDIY 285
             +  +GKR  +S   D+ + ++
Sbjct: 462 VAWHPDGKR-FVSGGNDKFIYLW 483


>gi|309790633|ref|ZP_07685187.1| hypothetical protein OSCT_1138 [Oscillochloris trichoides DG6]
 gi|308227361|gb|EFO81035.1| hypothetical protein OSCT_1138 [Oscillochloris trichoides DG6]
          Length = 378

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 92/288 (31%), Gaps = 29/288 (10%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV---- 239
           VV  +  + L +    G + R         L +  +SP+  ++     ++ D   +    
Sbjct: 91  VVGDLKADRLVLSGPKGEDRRVRYEVEGHELSDIVWSPDGSQIYLRLLNNLDPPDIPSGI 150

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR-----------FSSNGKRALISVQK--DEAMDIYS 286
           Y M          + +      A              + +G R L+ V      +  +  
Sbjct: 151 YRMAAADGPLELLLADEPLPNAANSMQMAREYRPFMIAPDGSRLLVEVDDLTQNSCTLAI 210

Query: 287 VDLQSNATERLT--NTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +    +A   LT  + L I    A +S D++++   +      QL+ + +       ++ 
Sbjct: 211 LPRDGSALLNLTPPDGLAIYCGDADWSADAARVALLAGDGAGPQLWQVDAQSGAMLALAT 270

Query: 344 DKEASYFDPVWSPQGD-LIAFTKFSGEKFAI--GVMKKDGSQERLLVEDSNLQAPT---- 396
                   P+W P G     +    G +  +   + + D +Q    +     + P     
Sbjct: 271 -TNVLARAPLWMPDGGLRFIWASREGGQGKLQFALAQLDAAQPTPAMIGPIFREPLGQVL 329

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           W+  G S   +     D    L  + +NG    L NT     D  W  
Sbjct: 330 WAADG-SGAVTVVAPEDQVVDLRWMPVNGEALVLPNTKQRIGDIAWGP 376



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 88/277 (31%), Gaps = 30/277 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEP-----RFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +  ++RDG     +T    ++   P       SP    +A+   D +   R+ L   + 
Sbjct: 50  QIARIERDGTTRALVTSETIEVQGFPPVATFGISPQG-TLAFVVGDLK-ADRLVLSGPKG 107

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNT- 300
           +    R       +    +S +G +  + +  +         IY +       E L    
Sbjct: 108 EDRRVRYEVEGHELSDIVWSPDGSQIYLRLLNNLDPPDIPSGIYRMAAADGPLELLLADE 167

Query: 301 ----------LFINISAS-YSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEA 347
                     +         +PD S+++ E D   +    L ++  +GS    ++     
Sbjct: 168 PLPNAANSMQMAREYRPFMIAPDGSRLLVEVDDLTQNSCTLAILPRDGSALLNLTPPDGL 227

Query: 348 SYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGR-S 403
           + +     WS     +A     G    +  +    G+   L   +   +AP W P G   
Sbjct: 228 AIYCGDADWSADAARVALLAGDGAGPQLWQVDAQSGAMLALATTNVLARAPLWMPDGGLR 287

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            I++ ++ G    +     L+    T         +P
Sbjct: 288 FIWASREGGQGKLQFALAQLDAAQPTPAMIGPIFREP 324


>gi|300917482|ref|ZP_07134142.1| conserved hypothetical protein [Escherichia coli MS 115-1]
 gi|300415286|gb|EFJ98596.1| conserved hypothetical protein [Escherichia coli MS 115-1]
          Length = 416

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 266 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 325

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 326 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 381

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 382 NHANPPSADAVVFSPDGQWLTWME------GGQLWITETD 415



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 304 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD 363

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 364 N----RIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLTW---MEGG-QLWITETD 415



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 5/104 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 317 RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 374

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            ++   +   N  S   A  FS +G+    +  +   + I   D
Sbjct: 375 EVEYLTENHANPPSAD-AVVFSPDGQWL--TWMEGGQLWITETD 415


>gi|294871762|ref|XP_002766029.1| ribonucleoside-diphosphate reductase large chain, putative
           [Perkinsus marinus ATCC 50983]
 gi|239866594|gb|EEQ98746.1| ribonucleoside-diphosphate reductase large chain, putative
           [Perkinsus marinus ATCC 50983]
          Length = 1504

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 66/220 (30%), Gaps = 38/220 (17%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           + +YD    +R   + +R      ++    + +++  +S + +    +        IY  
Sbjct: 773 FLSYDIGHSIRRVQVWSRTGMIRSQLAQVSTAVVSAAWSPDSETIAFTC----GPSIYLK 828

Query: 288 DL-QSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQL-YVMQSNGSDQKRISQD 344
            L       +          +  +SP +  IV      G E   Y +          S  
Sbjct: 829 TLVAGRGLIQWKAVDSGSEGTPYWSPVTKLIV-----SGSEDCRYRIWQATGQLLYRSDP 883

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---------SQERLLVEDSNLQAP 395
            E +     W+P G L+A     G    I +    G           +  L +     +P
Sbjct: 884 LEHAATAVQWAPNGKLLAV----GVSDMIKLCDATGWGHSHTNLSGLDHALYQQCGNTSP 939

Query: 396 --------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                    WSP G  LI      G     +   D+ GR 
Sbjct: 940 GGSSPFALCWSPDGTQLI-----MGMGDGSVLVADVIGRT 974



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 59/196 (30%), Gaps = 23/196 (11%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     + V  R G  IR         +    +SP+ + +A+          +YL     
Sbjct: 779 GHSIRRVQVWSRTGM-IRSQLAQVSTAVVSAAWSPDSETIAFTC-----GPSIYLKTLVA 832

Query: 247 DRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFIN 304
            R   +           P +S    + ++S  +D    I+     +      ++      
Sbjct: 833 GRGLIQWKAVDSGSEGTPYWSP-VTKLIVSGSEDCRYRIWQ---ATGQLLYRSDPLEHAA 888

Query: 305 ISASYSPDSSQIVF-ESDR--------EGKEQLYVMQSNGSDQKR--ISQDKEASYFDPV 353
            +  ++P+   +    SD          G     +   + +  ++   +    +S F   
Sbjct: 889 TAVQWAPNGKLLAVGVSDMIKLCDATGWGHSHTNLSGLDHALYQQCGNTSPGGSSPFALC 948

Query: 354 WSPQGDLIAFTKFSGE 369
           WSP G  +      G 
Sbjct: 949 WSPDGTQLIMGMGDGS 964


>gi|229086922|ref|ZP_04219081.1| TolB domain protein [Bacillus cereus Rock3-44]
 gi|228696432|gb|EEL49258.1| TolB domain protein [Bacillus cereus Rock3-44]
          Length = 410

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 79/201 (39%), Gaps = 38/201 (18%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G R       D  + I          +++T   +I     +S D   I +    E +++L
Sbjct: 28  GIRVAFIRNHDLWIKI------DGKEKQITKGEYI-TKPKWSYDGKWIAYAKGEE-QKEL 79

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            + +     Q   SQ +  +Y    WSP  ++IAF +F+G      V KKD + E +   
Sbjct: 80  ELYRVTDGKQVAPSQTEATNY---QWSPVENIIAF-EFTGTLNTFDVEKKDATFENV--- 132

Query: 389 DSNLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLNG-----RNETLINTPA---- 435
            S +    W P G+  + S +      G TG++LY +  +      + + L   P+    
Sbjct: 133 SSGVGDYAWYPDGKRFLVSSEAQLLPTGWTGAQLYEVQKDAGMNPNKMKHLYTLPSMQED 192

Query: 436 ----------YASDPQWVGFM 446
                     ++ + +W+ F+
Sbjct: 193 FLAYVASDFKWSPNGKWIAFL 213



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 86/235 (36%), Gaps = 41/235 (17%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + + +P++S + + +AYA  +++  L +Y +      
Sbjct: 35  RNHDLWI-KIDGKEKQIT---KGEYITKPKWSYDGKWIAYAKGEEQKELELYRVTDG--- 87

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K++   ++     ++S               ++ + V+ +    E +++ +      +
Sbjct: 88  --KQVAPSQTEATNYQWSPVENIIAFEFT--GTLNTFDVEKKDATFENVSSGVGDY---A 140

Query: 309 YSPDSSQIVFESD-------REGKEQLYVMQSNGSDQKRISQDK----------EASYFD 351
           + PD  + +  S+         G +   V +  G +  ++                   D
Sbjct: 141 WYPDGKRFLVSSEAQLLPTGWTGAQLYEVQKDAGMNPNKMKHLYTLPSMQEDFLAYVASD 200

Query: 352 PVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNLQAPT 396
             WSP G  IAF       +S +   + ++K DGS      + LL       AP+
Sbjct: 201 FKWSPNGKWIAFLAVPTASWSADSNTLCLLKADGSYFEKVDQMLLNSQWIQWAPS 255



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 48/342 (14%), Positives = 125/342 (36%), Gaps = 66/342 (19%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS-------------- 159
           G+ I   K   + E  L+ V D KQ+   +  ++   W  + + I+              
Sbjct: 65  GKWIAYAKGEEQKELELYRVTDGKQVAPSQTEATNYQWSPVENIIAFEFTGTLNTFDVEK 124

Query: 160 -DDIYQSITGEKGDF----NSRILFVSESV---VSGIIKNSLCVMDRD-GANIRYLTP-- 208
            D  +++++   GD+    + +   VS       +G     L  + +D G N   +    
Sbjct: 125 KDATFENVSSGVGDYAWYPDGKRFLVSSEAQLLPTGWTGAQLYEVQKDAGMNPNKMKHLY 184

Query: 209 --------SRDQILFEPRFSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKRI 253
                       +  + ++SPN + +A+        + D   +  +    +  ++  + +
Sbjct: 185 TLPSMQEDFLAYVASDFKWSPNGKWIAFLAVPTASWSADSNTLCLLKADGSYFEKVDQML 244

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-----ERLTNTLFINISAS 308
            N + +  AP      +  L  ++    + + +  L+         E+ T   +++   +
Sbjct: 245 LNSQWIQWAPS-----RSILAYIEGSGRIALENKHLKIKEVPALQQEKFTPKGYVDWDFT 299

Query: 309 YSPDSSQIVFESDREGK------------EQLYVMQSNGSDQKRISQD-KEASYFDPVWS 355
           +  D    +    R  +              LY +    + Q++I+   K+   ++PV+ 
Sbjct: 300 WHND---TLITLSRAKEMEWENEEEKRSLPSLYQVNIQTNRQRQITTPQKKHGDYNPVYI 356

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              + + + + +  K  + +   DGS+ +  +E+ ++  P +
Sbjct: 357 RSENQLTWVRSNRTKADVWLASGDGSKAKKWIENIDVPQPYY 398


>gi|310817330|ref|YP_003949688.1| peptidase, s9b (dipeptidyl peptidase iv) subfamily [Stigmatella
           aurantiaca DW4/3-1]
 gi|309390402|gb|ADO67861.1| Peptidase, S9B (Dipeptidyl peptidase IV) subfamily [Stigmatella
           aurantiaca DW4/3-1]
          Length = 753

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 98/301 (32%), Gaps = 62/301 (20%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMD-------- 243
            V+  DG      +   +     P   +SP+ + +     D   + ++ ++D        
Sbjct: 194 AVLGSDGRTRIERSGEENHGWQIPEKAWSPDNRFLVVWRNDLRGVHKIPIVDYSSALERV 253

Query: 244 --TRIDRAPKRIGNFRSMILAPR--------------------FSS-NGKRALISVQKDE 280
                 +    +G     ++ P                     +   +G+  ++ + +D 
Sbjct: 254 TLVPYVKTGTPLGRAEFSVVEPATGRVTRIPPMEEETYDWFAGWRPGSGEALILHLSRDG 313

Query: 281 -AMDIYSVDLQSNATERL----------------TNTLFINISASYSPDSSQIVFESDRE 323
             +D+ +V+  S    ++                T      ++    PD +  ++ S+R+
Sbjct: 314 KRLDLSAVEPVSGKRRQVLREERPESFVAGLDFATEGWARQVTPL--PDDTGFLWMSERD 371

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----KFAIGVMKKD 379
           G   +Y+    G   +++++     +     +P+GD +     +      +  +      
Sbjct: 372 GWRHVYLYDFAGKLVRQLTRGAFPIHQVAGVAPKGDALFLLASADSTAPYEHLLYRGSLK 431

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSL--IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           G   + +   S +    +SPSG      +S +           +  +G+    + T A A
Sbjct: 432 GGALKRMSSGSGMHRIAFSPSGGYYVDAWSSRTQARLRD---MVSTDGKTRFRL-TAADA 487

Query: 438 S 438
           S
Sbjct: 488 S 488



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 76/236 (32%), Gaps = 39/236 (16%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK- 278
           +PN Q +A      +    V   D R         N    I    +S + +  ++     
Sbjct: 179 APNGQAIA---VQRDGGFAVLGSDGRTRIERSGEENHGWQIPEKAWSPDNRFLVVWRNDL 235

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                I  VD  S+A ER+T   ++                    G+ +  V++      
Sbjct: 236 RGVHKIPIVD-YSSALERVTLVPYVKTG--------------TPLGRAEFSVVEPATGRV 280

Query: 339 KRISQDKEASYFDPV-WSPQGD--LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            RI   +E +Y     W P     LI      G++  +  ++    + R ++ +   ++ 
Sbjct: 281 TRIPPMEEETYDWFAGWRPGSGEALILHLSRDGKRLDLSAVEPVSGKRRQVLREERPESF 340

Query: 396 T---------WS------PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                     W+      P     ++  ++DG     +Y  D  G+    +   A+
Sbjct: 341 VAGLDFATEGWARQVTPLPDDTGFLWMSERDG--WRHVYLYDFAGKLVRQLTRGAF 394


>gi|225556647|gb|EEH04935.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 1558

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 60/212 (28%), Gaps = 33/212 (15%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISV 276
            FSP+ Q +    +D            R    P    +     ++     S +GK    + 
Sbjct: 904  FSPDGQLLISNGFDIPKAWDTTTGALR-GAFPDISTSLFGATISTKVALSPDGKFLACTS 962

Query: 277  QKDEAMDIYSVDLQSNATER------LTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
              D  + ++         +R      L        S  +S       F + +     + +
Sbjct: 963  GFDNNIRLW-------DVKRVVLCSTLEGHEAGVSSIVFSSSGE---FLASKSRDRCIRI 1012

Query: 331  MQSNGSDQKRISQDKEA----------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                    + +   KE              + ++SP GD IA    S     + +     
Sbjct: 1013 WNITTGHAEILFNGKEGRKPVATQKCDDPAEIIFSPNGDFIAGCINS---HQVQLWDAKT 1069

Query: 381  -SQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             S   LL     +    +SP GR +  S    
Sbjct: 1070 YSTLGLLTHSHKIMNFAFSPDGRLIASSSLYG 1101



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 56/333 (16%), Positives = 102/333 (30%), Gaps = 77/333 (23%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              RLWDV  ++ ++        A    I           +    G+F            S
Sbjct: 967  NIRLWDV--KRVVLCSTLEGHEAGVSSI-----------VFSSSGEFL----------AS 1003

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQI-------LFEPR---FSPNQQKVAYATYDDEDI 236
                  + + +    +   L   ++           +P    FSPN   +A         
Sbjct: 1004 KSRDRCIRIWNITTGHAEILFNGKEGRKPVATQKCDDPAEIIFSPNGDFIAGCINSH--- 1060

Query: 237  LRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT- 294
             +V L D +       +  + + M  A  FS +G+    S      +  +  D  +    
Sbjct: 1061 -QVQLWDAKTYSTLGLLTHSHKIMNFA--FSPDGRLIA-SSSLYGPVKTW--DPVTTKPC 1114

Query: 295  ---------ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                     + +T++ F     S+SPD   I    +  G  +++       D K +S   
Sbjct: 1115 GILARVDLGQLITSSSF-----SFSPDGKLIACIVN--GAVEIW-------DLKTLSFCG 1160

Query: 346  EASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSP 399
                   +    +SP   L+A       KF              L+E   S++ +  +SP
Sbjct: 1161 SIDNSQGIKHITFSPDSGLLAAISGQYVKF----FDPQTRTLCGLLEGHTSDVTSVKFSP 1216

Query: 400  SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +G+ +  S             I +   NET I 
Sbjct: 1217 NGQLVASSSSDHSVRLWDAVDIGIAEINETRIA 1249



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 59/383 (15%), Positives = 116/383 (30%), Gaps = 110/383 (28%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             R+W++        +  F+     + +A    DD  + I    GDF +  +         
Sbjct: 1010 IRIWNITTG---HAEILFNGKEGRKPVATQKCDDPAEIIFSPNGDFIAGCI--------- 1057

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               + + + D    +   L     +I+    FSP+ + +A ++     +     + T+  
Sbjct: 1058 -NSHQVQLWDAKTYSTLGLLTHSHKIMNF-AFSPDGRLIASSSL-YGPVKTWDPVTTKPC 1114

Query: 248  RAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                R+   + +  +   FS +GK     V  + A++I+  DL++     L+    I+ S
Sbjct: 1115 GILARVDLGQLITSSSFSFSPDGKLIACIV--NGAVEIW--DLKT-----LSFCGSIDNS 1165

Query: 307  A-----SYSPDSSQIVFES-------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                  ++SPDS  +   S       D + +    +++ + SD   +             
Sbjct: 1166 QGIKHITFSPDSGLLAAISGQYVKFFDPQTRTLCGLLEGHTSDVTSVKFSPNGQLVASSS 1225

Query: 355  SP----------------QGDLIAFTKFSGEKFAIGVMKKD-GSQER------------- 384
            S                     IA  KF G   +I     D   + R             
Sbjct: 1226 SDHSVRLWDAVDIGIAEINETRIAKLKFIGNGHSIISYSSDETVELRDPSTGTSTFTVPD 1285

Query: 385  -LLVEDSNLQAPT-------------------------------------WSPSGRSLIF 406
             +   D     P+                                     +SP G+SL  
Sbjct: 1286 FITFHDKVEYFPSNNLFAYADFDTINLWNMVTGEFYASLEEPDKVVTTIAFSPDGKSLAA 1345

Query: 407  SRKKDGDTGSKLYSIDLNGRNET 429
            S +   D    ++  DL  +   
Sbjct: 1346 SYE---DHPVVIW--DLTKKKRR 1363



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 52/165 (31%), Gaps = 18/165 (10%)

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+    AYA +D      + L +         +     ++    FS +GK    S + D 
Sbjct: 1297 PSNNLFAYADFDT-----INLWNMVTGEFYASLEEPDKVVTTIAFSPDGKSLAASYE-DH 1350

Query: 281  AMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             + I+ +   +    R  L+  L    +  +S D   +V +S       + +        
Sbjct: 1351 PVVIWDL---TKKKRRCVLSGQLKNVQTLVFSFDGRLLVADSL---YSSICLWDPTTGKS 1404

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                Q K       V S    +I     S    ++ V     +Q 
Sbjct: 1405 LGTLQGKMGVISGIVVSSDAKVII----SKSTHSVKVWDAKTAQV 1445


>gi|212634965|ref|YP_002311490.1| peptidase S9, prolyl oligopeptidase active site region [Shewanella
           piezotolerans WP3]
 gi|212556449|gb|ACJ28903.1| Peptidase S9, prolyl oligopeptidase active site region [Shewanella
           piezotolerans WP3]
          Length = 689

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 16/134 (11%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLT 298
           R              + A   S NGK+A+    + +        D++ VD +S  T+R+T
Sbjct: 29  RTHDIIIDDFFDIGGMSAVTLSPNGKKAVWLESRWDKELDKSQRDLWLVDTKSRQTKRMT 88

Query: 299 NTLFINISASYSPDSSQIVFE---------SDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            T     S  +SP+   + +          +   GK Q++ +  +  D + ++++KE   
Sbjct: 89  FTNESESSPQWSPNGEYVYYLGKIKQPDAKAPYNGKTQVFRISISSGDSQPMTKEKEG-V 147

Query: 350 FDPVWSPQGDLIAF 363
                S  G  + F
Sbjct: 148 SSFELSHDGKSLYF 161



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 88/266 (33%), Gaps = 52/266 (19%)

Query: 220 SPNQQKVAYATYD-----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SPN +K  +         D+    ++L+DT+  R  KR+        +P++S NG+    
Sbjct: 50  SPNGKKAVWLESRWDKELDKSQRDLWLVDTK-SRQTKRMTFTNESESSPQWSPNGEYVYY 108

Query: 275 SVQ---------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF------- 318
             +          +    ++ + + S  ++ +T       S   S D   + F       
Sbjct: 109 LGKIKQPDAKAPYNGKTQVFRISISSGDSQPMTKEKEGVSSFELSHDGKSLYFLANKTVK 168

Query: 319 -----ESDREGKEQ------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 S R                 LY +      Q+ +  D +  +   V +  G  I
Sbjct: 169 DTDEWASMRASHSAPKYGHGERKTNPLYQLDLEHFKQQLLLDDDKVVWEFKV-NNDGSKI 227

Query: 362 AFTKFSGEKF-------AIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD 413
           A    +  +         + V      Q  +L +     +AP  SP G  L+    ++ +
Sbjct: 228 ARITTTDNELVFLEGWSDVEVFNTQTKQNEVLADKQWREKAP--SPYG-WLLGLAWQENN 284

Query: 414 TGSKLYSIDLNGRNETLINTPAYASD 439
           T    + ID +G    L      A+D
Sbjct: 285 TELA-FRIDFDGHPGKLFINNTKAAD 309



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 67/189 (35%), Gaps = 26/189 (13%)

Query: 268 NGKRALISVQKD-------EAMDIYSVDLQSNATERLTNTLFINISAS---------YSP 311
           +G +       D          D+   + Q+   E L +  +   + S         +  
Sbjct: 223 DGSKIARITTTDNELVFLEGWSDVEVFNTQTKQNEVLADKQWREKAPSPYGWLLGLAWQE 282

Query: 312 DSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKF 366
           +++++ F  D +G   +L++  +  +D+  +   +      +  D  W P  D I +   
Sbjct: 283 NNTELAFRIDFDGHPGKLFINNTKAADKPSLEVSRPEMVTLTASDLTWRPNSDEICYRGA 342

Query: 367 SGEKFAIGVMKKD----GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              +  +   + +    G    ++  D+ + + ++S +G S+ FS     D    ++  D
Sbjct: 343 DHARVKLFCTEIEDGEQGDTRTVIPGDTVIGSFSFSQNGESVAFSHN-GLDHFYDMFIAD 401

Query: 423 LNGRNETLI 431
            +       
Sbjct: 402 ADSNRAKPT 410



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 34/102 (33%), Gaps = 12/102 (11%)

Query: 347 ASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSP 399
                   SP G    + +          +  + ++     Q + +   +  ++ P WSP
Sbjct: 42  GGMSAVTLSPNGKKAVWLESRWDKELDKSQRDLWLVDTKSRQTKRMTFTNESESSPQWSP 101

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDP 440
           +G  + +  K         Y    NG+ +   I+  +  S P
Sbjct: 102 NGEYVYYLGKIKQPDAKAPY----NGKTQVFRISISSGDSQP 139


>gi|77748537|ref|NP_640944.2| dipeptidyl peptidase IV [Xanthomonas axonopodis pv. citri str. 306]
          Length = 770

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 48/354 (13%), Positives = 99/354 (27%), Gaps = 80/354 (22%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           A      +Y     E G     +L   +   + I   +L V D  G     LT    +  
Sbjct: 137 ARARCSKLYAKDKPEPG-----VLSPDKRSEAFIRDWNLWVRDLAGGQETQLTRDGVENF 191

Query: 215 FEP--------------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-------- 252
                             +SP+ +K+A    D      +YL+ T++     +        
Sbjct: 192 GYATDNAGWQHTDNAIVAWSPDSRKIATFQQDQRKTGDMYLVSTKLGHPELQAWKYPLAG 251

Query: 253 ------------------------------------IGNFRSMILAPRFSSNGKRALI-- 274
                                               +     +    +++ + K      
Sbjct: 252 DKDVTMIERVIIDVPTRSVLRLKTPPDQHRSTLCDDVSCSPGLWDDEKWAPDSKTLAFAS 311

Query: 275 SVQKDEAMDIYSVDLQSNATE------RLTNTLFINISASYS--PDSSQIVFESDREGKE 326
           + +  +   +   D  + A          T      ++A+++  P S++ V+ S+R    
Sbjct: 312 TSRFHKQTWLRIADASTGAVRTAFDETVKTYYESGQVAANWAYLPASNEAVWFSERSDWG 371

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKD 379
           QLY+        KR     + +  + +        A+    G           +  +  D
Sbjct: 372 QLYLYDLATGKPKRAITTGQGNVTELLRVDPVTRTAWFVGVGRSAGVDPYYQQLWKVSLD 431

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G +  LL  +    +   SP G   + +          L     +GR  + + T
Sbjct: 432 GGEPVLLTPEPANHSIALSPDGARFVDTYSTSVTPPVTLLREAGDGRTVSTMAT 485


>gi|254168520|ref|ZP_04875364.1| peptidase, S9A/B/C family, catalytic domain protein
           [Aciduliprofundum boonei T469]
 gi|197622575|gb|EDY35146.1| peptidase, S9A/B/C family, catalytic domain protein
           [Aciduliprofundum boonei T469]
          Length = 631

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 94/263 (35%), Gaps = 39/263 (14%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I +V   +          +   DG +  + +  +D     PRF+    K+ Y    ++
Sbjct: 39  TKIAYVVARMDKKKNDYLSKIYLYDGKSKAFTSGPKD---TMPRFA--GDKIVYVRKGEK 93

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                 +  + +    ++I      ++      +G                 V+ +++  
Sbjct: 94  KSEIRVI--SLVGGESRKIAEVEKGVI--NMKIDGDYVYFLS--------PVVNKENDDV 141

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +R+T+  F         +    ++ +      Q++ +   G   +++S   E      V 
Sbjct: 142 KRITSIPFYF-------NGKGFIYNA----SMQIFRVPLKGGKIEKLSNVDEKISSFDV- 189

Query: 355 SPQGDLIAFTKFSGEKF----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL-IFSRK 409
             +   I ++    E+      + ++K DG  ER+  + +++ A   SP G+ +  F   
Sbjct: 190 --KNGRIIYSASDDEREPFMENLYILK-DGKGERISKKKASISAFRISPDGKKIAAFLSF 246

Query: 410 KDGDTG--SKLYSIDLNGRNETL 430
            D       +LY + + G +  L
Sbjct: 247 HDKGFAEHKRLYMLSMEGGDYEL 269



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 15/138 (10%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           +D  + IT     FN +    + S         +  +   G  I  L+   ++I     F
Sbjct: 138 NDDVKRITSIPFYFNGKGFIYNAS-------MQIFRVPLKGGKIEKLSNVDEKIS---SF 187

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                ++ Y+  DDE    +  +    D   +RI   ++ I A R S +GK+    +   
Sbjct: 188 DVKNGRIIYSASDDEREPFMENLYILKDGKGERISKKKASISAFRISPDGKKIAAFLSFH 247

Query: 280 E-----AMDIYSVDLQSN 292
           +        +Y + ++  
Sbjct: 248 DKGFAEHKRLYMLSMEGG 265


>gi|152971785|ref|YP_001336894.1| translocation protein TolB precursor [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|150956634|gb|ABR78664.1| translocation protein TolB precursor [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
          Length = 391

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 82/250 (32%), Gaps = 27/250 (10%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F  +   + +A   D      YL++     A +              S + K 
Sbjct: 36  NYFYQKCFFNDGSHLLFAGEFDGH-WNYYLLNIASAEAVQLTEGAGDNTFGGFLSPDDKS 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTL----------------FINISAS-YSPDSS 314
                     +++    L      R+++                   I I+ S ++P + 
Sbjct: 95  LYYVKNDRILLEVNLTTLAEREVYRVSDDWVGYGTWVANSDCSKLVGIEIAKSDWTPLND 154

Query: 315 QIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF- 371
             +F           +++ +  S   ++  +++     P++ P     +AF         
Sbjct: 155 WQIFHDFFHKGPHCRLLRVDLRSGASQVIHEEKIWLGHPIYRPFDDHTVAFCHEGPHDLV 214

Query: 372 --AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNG 425
              + ++ +DGS  R +       +     W P G +LI+     G  G  +Y  D  +G
Sbjct: 215 DARMWLVNEDGSHVRKVKAHAPGESCTHEFWVPDGSALIYVSYLKGQQGRTIYRFDPESG 274

Query: 426 RNETLINTPA 435
            NE L+  PA
Sbjct: 275 VNEALMTMPA 284



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 38/190 (20%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG+++R +   +  +      + P+   + Y +
Sbjct: 197 PFDDHTVAFCHEGPHDLVDARMWLVNEDGSHVRKVKAHAPGESCTHEFWVPDGSALIYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---------------I 274
           Y      R +Y  D         +       L   F  +G   +                
Sbjct: 257 YLKGQQGRTIYRFDPESGVNEALMTMPACSHLMSNF--DGTLLVGDGSGTPVDVKDTGGY 314

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFES 320
           S+  D    +Y  ++      R+      + S               S++PD S I+F S
Sbjct: 315 SIDND--PWLYVFNVAEKRYFRVARH---DTSWATVANSRQVTHPHPSFTPDDSAILFSS 369

Query: 321 DREGKEQLYV 330
           D++GK  +Y+
Sbjct: 370 DKDGKPAIYI 379



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/235 (12%), Positives = 68/235 (28%), Gaps = 39/235 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           ++P      +  +  +      L       A + I   +  +  P +   +        +
Sbjct: 149 WTPLNDWQIFHDFFHKGPHCRLLRVDLRSGASQVIHEEKIWLGHPIYRPFDDHTVAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ V+   +   ++             + PD S +++ S  +G++   +Y 
Sbjct: 209 GPHDLVDARMWLVNEDGSHVRKVKAHAPGESCTHEFWVPDGSALIYVSYLKGQQGRTIYR 268

Query: 331 MQSNGS------------------DQKRISQDKEASYFD----PVWSPQGDLIAFTKFSG 368
                                   D   +  D   +  D      +S   D   +     
Sbjct: 269 FDPESGVNEALMTMPACSHLMSNFDGTLLVGDGSGTPVDVKDTGGYSIDNDPWLYVFNVA 328

Query: 369 EKFAIGVMKKDGS-----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           EK    V + D S       R +        P+++P   +++FS  KDG     +
Sbjct: 329 EKRYFRVARHDTSWATVANSRQVTHP----HPSFTPDDSAILFSSDKDGKPAIYI 379



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 37/109 (33%), Gaps = 6/109 (5%)

Query: 288 DLQSNAT-ERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           D  + A   RLT               +  D S ++F  + +G    Y++    ++  ++
Sbjct: 16  DPDTGAEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHWNYYLLNIASAEAVQL 75

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++    + F    SP    + + K       + +      +   + +D 
Sbjct: 76  TEGAGDNTFGGFLSPDDKSLYYVKNDRILLEVNLTTLAEREVYRVSDDW 124


>gi|153873666|ref|ZP_02002174.1| peptidase C14, caspase catalytic subunit p20 [Beggiatoa sp. PS]
 gi|152069868|gb|EDN67826.1| peptidase C14, caspase catalytic subunit p20 [Beggiatoa sp. PS]
          Length = 560

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 57/154 (37%), Gaps = 9/154 (5%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +  I +  F   GK    S+  D  + ++S+        + T  +   ++ + SPD   +
Sbjct: 5   KGHIKSIVFHPQGKWLA-SIGYDGNIILWSLP-DGEWLTQWTIGIEQTLALAASPDGHYL 62

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                     Q+ +        ++I +  +       +SP GD++A   + G    I  +
Sbjct: 63  A---SEGKNHQITLWDVETQQPQQIFEGHQNYISGLDFSPNGDMLASASYDGTA-RIWQI 118

Query: 377 KKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSR 408
           K  G     L    + +     +S +G+ L+ S 
Sbjct: 119 KT-GKPLHQLEFGPDNRVQKVAFSQNGKRLVTSS 151



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 53/356 (14%), Positives = 115/356 (32%), Gaps = 48/356 (13%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSIT 167
            V     DR  V        RLWD +    + + +   +S +        I         
Sbjct: 179 SVRFMANDRYLVSASRDNTLRLWDTQSGVTLRVLQGHTASVSGLATFEEQIVSASNDGTI 238

Query: 168 GEKGDFNSRILFVSESVVSGIIKN-----SLCVMDRDGANIRYLTPSRDQILFEP----- 217
                       V  S     +        + V  ++G+   Y  P+   +L++      
Sbjct: 239 RRWNIALPYQQIVDLSNEPTTVAIAPTGDKIAVGFKNGSLHLYALPNAKHLLWKQLKAHT 298

Query: 218 ------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
                  FS + + +A A YD  + ++++ +         +   ++ +I A  FS   K+
Sbjct: 299 ARVKSLAFSADGKWLASAGYD--NTVKIWTLKNNQLIELHKFI-YKDIINAVTFSPGTKK 355

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQ 327
             I+   D  + + ++       +++         A    S+  D  +        G  +
Sbjct: 356 LAIAGN-DGQVHLLTL-----KNQQIRTYQAYEQEAVNSLSFFQDQEKNTLSLLTTGDFE 409

Query: 328 LYVMQSN--GSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           + +   N   +++  + Q    +     WS   P G  IA      +   I       +Q
Sbjct: 410 VKLWNLNQWENNKPALLQAYPKTINSLAWSALSPDGQQIATVGRD-QLVHIYSTTNQSTQ 468

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFS------RKKDGDTGSKLYSIDLNGRNETLIN 432
             L   +S +    +SP    ++ +      R  D +   +L+++ L  +N   + 
Sbjct: 469 YHLEGHESTIFRVIFSPDSNFIVTTGADATLRFWDLENHHELFTLRLPTKNLRPVP 524



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 60/205 (29%), Gaps = 23/205 (11%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEP---------RFSPNQQKVAYATYDDEDILRVYLMD 243
           L  +  DG  I +  P  + +               SP+   +A     +    ++ L D
Sbjct: 20  LASIGYDGNIILWSLPDGEWLTQWTIGIEQTLALAASPDGHYLA----SEGKNHQITLWD 75

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +  +     ++ I    FS NG     S   D    I+ +        +L      
Sbjct: 76  VETQQPQQIFEGHQNYISGLDFSPNGDMLA-SASYDGTARIWQI-KTGKPLHQLEFGPDN 133

Query: 304 NIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +   ++S +  ++V  S     + + +      +   +    + + +   +      + 
Sbjct: 134 RVQKVAFSQNGKRLVTSSL---DKMVRLWGVESGNLLNVLLGHKETVYSVRFMANDRYLV 190

Query: 363 FTKFSGEKFAIGVMKK-DGSQERLL 386
                     + +     G   R+L
Sbjct: 191 SASRDNT---LRLWDTQSGVTLRVL 212



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 86/225 (38%), Gaps = 21/225 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +  L    D  + +  FS N +++  ++ D      V L           +   +  
Sbjct: 121 GKPLHQLEFGPDNRVQKVAFSQNGKRLVTSSLDK----MVRLWGVESGNLLNVLLGHKET 176

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS--ASYSPDSSQIV 317
           + + RF +N  R L+S  +D  + ++  D QS  T R+      ++S  A++     QIV
Sbjct: 177 VYSVRFMAN-DRYLVSASRDNTLRLW--DTQSGVTLRVLQGHTASVSGLATF---EEQIV 230

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S+ +G  + + +         +S +          +P GD IA    +G      +  
Sbjct: 231 SASN-DGTIRRWNIALPYQQIVDLSNEP----TTVAIAPTGDKIAVGFKNGSLHLYALPN 285

Query: 378 KDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 + L    + +++  +S  G+ L  +     D   K++++
Sbjct: 286 AKHLLWKQLKAHTARVKSLAFSADGKWLASAGY---DNTVKIWTL 327



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 41/115 (35%), Gaps = 11/115 (9%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + P    +      +G   L+ +  +G    + +   E +      SP G  +A     G
Sbjct: 13  FHPQGKWLA-SIGYDGNIILWSL-PDGEWLTQWTIGIEQTLALAA-SPDGHYLA---SEG 66

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +   I +   +  Q + + E          +SP+G  L  +     D  ++++ I
Sbjct: 67  KNHQITLWDVETQQPQQIFEGHQNYISGLDFSPNGDMLASASY---DGTARIWQI 118


>gi|238798122|ref|ZP_04641609.1| Oligogalacturonide lyase [Yersinia mollaretii ATCC 43969]
 gi|238717976|gb|EEQ09805.1| Oligogalacturonide lyase [Yersinia mollaretii ATCC 43969]
          Length = 388

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 30/182 (16%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 ++   + +++ DG+N+R + T +  +      + P+   + Y +Y      R  
Sbjct: 207 HEGPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKSSPDRFI 266

Query: 241 LMDTRIDRAPKRIGNFR------SMILAPRFSSNGKRALISVQKDEAMDI------YSVD 288
                     +++          S         +G  A + VQ D    I      Y  +
Sbjct: 267 YSADPETLENRQLTKMPACSHLMSNYDGTLLVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326

Query: 289 LQSNATERLTNTLFINIS--------------ASYSPDSSQIVFESDREGKEQLYVMQSN 334
           L++    R+      + S               S++PD  Q++F SD  GK  LY++   
Sbjct: 327 LKNGTQHRVARH---DTSWKVFEGDRQVTHPHPSFTPDDKQVLFTSDVHGKPALYLVTLP 383

Query: 335 GS 336
            S
Sbjct: 384 ES 385



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/236 (10%), Positives = 72/236 (30%), Gaps = 35/236 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           + P      +  +   +     +           I      +  P +   +        +
Sbjct: 149 WQPLTDWKKFHEFYFTNPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDNTVAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ ++   +   ++ T+    +     + PD S +V+ S  +      +Y 
Sbjct: 209 GPHDLVDARMWLINEDGSNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKSSPDRFIYS 268

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMK 377
                 + +++++    S+    +   G L+                + I       V  
Sbjct: 269 ADPETLENRQLTKMPACSHLMSNY--DGTLLVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326

Query: 378 K-DGSQERLLVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +G+Q R+   D++ +            P+++P  + ++F+    G     L ++
Sbjct: 327 LKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQVLFTSDVHGKPALYLVTL 382



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 79/243 (32%), Gaps = 31/243 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
               +++    +  +D      +       P  +   R+      F+ +G + L     D
Sbjct: 1   MAKGKQIPLTFHTYQDASTGAQVTRLT---PPDVTCHRNYFYQKCFTRDGSKLLFGGAFD 57

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + Y +DL +    +LT     N    + SP+   + +  +      L  +  +  ++
Sbjct: 58  GPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPEDDALFYVKE---GRNLMRVSLDTLEE 114

Query: 339 KRIS-----QDKEASYFDPV--------------WSPQGDLIAFTKFSGEKFAIGVMKKD 379
             +           ++                  W P  D   F +F        +M+ D
Sbjct: 115 SVVYQVPEEWVGYGTWVANSDCTKLVGIEIKREDWQPLTDWKKFHEFYFTNPCCRLMRVD 174

Query: 380 ---GSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLINTP 434
              G    +L E+  L  P + P    ++ F  +   D   ++++ I+ +G N   + T 
Sbjct: 175 LKTGESTVILQENQWLGHPIYRPYDDNTVAFCHEGPHDLVDARMWLINEDGSNMRKVKTH 234

Query: 435 AYA 437
           A  
Sbjct: 235 AEG 237



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 88/293 (30%), Gaps = 53/293 (18%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            H   +  YQ      G   S++LF      +     +  ++D +      LT  R    
Sbjct: 33  CHR--NYFYQKCFTRDG---SKLLF----GGAFDGPWNYYLLDLNTQVATQLTEGRGDNT 83

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           F    SP    + Y   +  +++RV L         +    +            G     
Sbjct: 84  FGGFLSPEDDALFYVK-EGRNLMRVSLDTLEESVVYQVPEEWVGY---------GTWVA- 132

Query: 275 SVQKDEAMDIYSVDLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGKEQLYV 330
                +   +  ++++    + LT+      F   +                    +L  
Sbjct: 133 ---NSDCTKLVGIEIKREDWQPLTDWKKFHEFYFTNPCC-----------------RLMR 172

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF---AIGVMKKDGSQERLL 386
           +     +   I Q+ +     P++ P   + +AF            + ++ +DGS  R +
Sbjct: 173 VDLKTGESTVILQENQW-LGHPIYRPYDDNTVAFCHEGPHDLVDARMWLINEDGSNMRKV 231

Query: 387 ---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPA 435
               E  +     W P G +L++           +YS D     N  L   PA
Sbjct: 232 KTHAEGESCTHEFWVPDGSALVYVSYLKSSPDRFIYSADPETLENRQLTKMPA 284


>gi|294673386|ref|YP_003574002.1| dipeptidyl-peptidase IV [Prevotella ruminicola 23]
 gi|294474096|gb|ADE83485.1| dipeptidyl-peptidase IV [Prevotella ruminicola 23]
          Length = 736

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 60/195 (30%), Gaps = 32/195 (16%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE--------RLTNTLFINISASYSPDSSQIVFES 320
           G    ++V       I   D+               L +       A  S D  QIV  S
Sbjct: 10  GVSLALAVSASAGKQITLTDITKGEFRSKSISAVYPLADG---ETYAQISSDGKQIVTYS 66

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IG 374
            + GK+   +  +  +    IS+         + SP G  +     +   +         
Sbjct: 67  FKTGKQVGVLFDAATARGAEISEVDGY-----IMSPDGTRLLIQTNTKAIYRRSFTATYY 121

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS-----IDLNGRNET 429
           +     ++   L +    Q P +SP G  + F R  +      LY      +  +G+   
Sbjct: 122 IYSIRNNKLEPLSDGGPQQTPVFSPDGNQIAFVRDNNIFLVKLLYDNAESQVTKDGKRNE 181

Query: 430 LINTPAYASDPQWVG 444
           +IN       P WV 
Sbjct: 182 VIN-----GIPDWVY 191



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 67/184 (36%), Gaps = 38/184 (20%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD---- 321
           SS+GK+ +    K         D  +     ++           SPD ++++ +++    
Sbjct: 56  SSDGKQIVTYSFKTGKQVGVLFDAATARGAEISEVDGY----IMSPDGTRLLIQTNTKAI 111

Query: 322 --REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK- 378
             R      Y+     +  + +S         PV+SP G+ IAF + +     I ++K  
Sbjct: 112 YRRSFTATYYIYSIRNNKLEPLSDGGP--QQTPVFSPDGNQIAFVRDN----NIFLVKLL 165

Query: 379 -DGSQERLLVEDSNLQA----PTW--------------SPSGRSLIFSRKKDGDTGSKLY 419
            D ++ ++  +    +     P W              +   + +++ R    ++  K Y
Sbjct: 166 YDNAESQVTKDGKRNEVINGIPDWVYEEEFSTNSSMVFTADSKQILWIRYD--ESAVKQY 223

Query: 420 SIDL 423
           S+ L
Sbjct: 224 SMQL 227



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 22/137 (16%)

Query: 220 SPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+  ++   T     Y        Y+   R ++      +       P FS +G +   
Sbjct: 96  SPDGTRLLIQTNTKAIYRRSFTATYYIYSIRNNKLEPL--SDGGPQQTPVFSPDGNQIAF 153

Query: 275 SVQKDEAMDIYSVDLQSNATERLT----NTLFINISASY-----SPDSSQIVFESDREGK 325
              +D  + +  + L  NA  ++T        IN    +        +S +VF +D    
Sbjct: 154 V--RDNNIFLVKL-LYDNAESQVTKDGKRNEVINGIPDWVYEEEFSTNSSMVFTAD---S 207

Query: 326 EQLYVMQSNGSDQKRIS 342
           +Q+  ++ + S  K+ S
Sbjct: 208 KQILWIRYDESAVKQYS 224


>gi|284050995|ref|ZP_06381205.1| WD-40 repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 479

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 83/240 (34%), Gaps = 17/240 (7%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           I+F   S V     +   +   D   N           + +  FSPN + +A +++D   
Sbjct: 168 IVFNPTSGVMASASSDQTIKLWDFMGNPLATLTGHITRVNQLAFSPNGEWLASSSHDG-- 225

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              V L +   +   +   + ++ +   +F+ + ++ + +   D  + ++  D   N  +
Sbjct: 226 --TVKLWNLASNSVHRNFTDHQASVWGLQFTPDSQKLV-TASWDNTLKMW--DKYGNILQ 280

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             +             D   +V  S       L +   +G    R++  K+  +   ++S
Sbjct: 281 VFSGHTGAVWGVDIRSDGEMMVSSSH---DNMLKLWGLDGRLYSRLNGHKDGVWSV-LFS 336

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGS----QERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           P GDLIA +        + +             L      +    +S +G+ L  + +  
Sbjct: 337 PDGDLIA-SGSRDRTVKLWLWDPTAQTYNLDHTLSGHQGIVIQVAFSNNGQYLASASEDQ 395



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 81/230 (35%), Gaps = 15/230 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS     ++ + +  G  ++ +    D++ +   FSP++Q +A  + D    L       
Sbjct: 50  VSASRDRTIKISNTKGEILQTIKDHDDEV-WAIAFSPDRQFIASGSRDQTVRLWKKSPID 108

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           ++    +   + +  + A  FS + +  + S   D  + ++           +TN     
Sbjct: 109 QLYYPREVFRSHQGEVDAVSFSPDSQTLV-SGSWDRTLRLWK-----THHPLMTNFPAHE 162

Query: 305 IS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  ++P S  +   S     + + +    G+    ++           +SP G+ +
Sbjct: 163 GEIWDIVFNPTSGVMASASS---DQTIKLWDFMGNPLATLT-GHITRVNQLAFSPNGEWL 218

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           A +   G    +  +  +          +++    ++P  + L+ +   +
Sbjct: 219 ASSSHDGTV-KLWNLASNSVHRNFTDHQASVWGLQFTPDSQKLVTASWDN 267



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 77/240 (32%), Gaps = 35/240 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A           +  +        K + + +  ++A  FS +  + + S  +
Sbjct: 1   FSPDGETIA-----VGGESGIIELFKSNGSPLKTLPHHQGEVMAIAFSPDYDQLV-SASR 54

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG--S 336
           D  + I   + +    + + +      + ++SPD  Q +    R+   +L+         
Sbjct: 55  DRTIKIS--NTKGEILQTIKDHDDEVWAIAFSPD-RQFIASGSRDQTVRLWKKSPIDQLY 111

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             + + +  +       +SP    +    +                  L+      +   
Sbjct: 112 YPREVFRSHQGEVDAVSFSPDSQTLVSGSWDRTLRLWKTHHP------LMTNFPAHEGEI 165

Query: 397 WSPSGRSLIF------SRKKDGDTGSKLY------SIDLNGRNETLINTPAYASDPQWVG 444
           W      ++F            D   KL+         L G + T +N  A++ + +W+ 
Sbjct: 166 W-----DIVFNPTSGVMASASSDQTIKLWDFMGNPLATLTG-HITRVNQLAFSPNGEWLA 219



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 85/233 (36%), Gaps = 23/233 (9%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     + +   +G+ ++ L P     +    FSP+  ++  A+ D     R   +    
Sbjct: 11  GGESGIIELFKSNGSPLKTL-PHHQGEVMAIAFSPDYDQLVSASRD-----RTIKISNTK 64

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS---VDLQSNATERLTNTLFI 303
               + I +    + A  FS + +    S  +D+ + ++    +D      E   +    
Sbjct: 65  GEILQTIKDHDDEVWAIAFSPDRQFIA-SGSRDQTVRLWKKSPIDQLYYPREVFRSHQGE 123

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLI 361
             + S+SPDS  +V  S  +   +L+      +    ++     E   +D V++P   ++
Sbjct: 124 VDAVSFSPDSQTLVSGS-WDRTLRLWK-----THHPLMTNFPAHEGEIWDIVFNPTSGVM 177

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGD 413
           A          I +    G+    L    + +    +SP+G  L  S   DG 
Sbjct: 178 ASASSDQT---IKLWDFMGNPLATLTGHITRVNQLAFSPNGEWLA-SSSHDGT 226



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 5/148 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS    N L +   DG  +          ++   FSP+   +A  + D    L ++    
Sbjct: 302 VSSSHDNMLKLWGLDG-RLYSRLNGHKDGVWSVLFSPDGDLIASGSRDRTVKLWLWDPTA 360

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +       +   + +++   FS+NG+    S  +D+ + ++S     ++   L     + 
Sbjct: 361 QTYNLDHTLSGHQGIVIQVAFSNNGQYLA-SASEDQTVRVWS--RYGDSLVHLGGNCGMV 417

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQ 332
            S  +SPD   +       G   L+ + 
Sbjct: 418 RSVEFSPDDQILA-NGGANGTITLWQID 444


>gi|256389504|ref|YP_003111068.1| hypothetical protein Caci_0274 [Catenulispora acidiphila DSM 44928]
 gi|256355730|gb|ACU69227.1| hypothetical protein Caci_0274 [Catenulispora acidiphila DSM 44928]
          Length = 661

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 83/263 (31%), Gaps = 39/263 (14%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAY---------ATYDDEDILRVYLMDTRIDR 248
            DG      T           +SP+  +V +         A  D    + +  +      
Sbjct: 52  YDGRGPGSGTNDWVNPAGNAVYSPDGSRVLFEGPDGCDYVADADGTGAVALTTVPAPELG 111

Query: 249 APKRIGNFRSMILAP----------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
             +   N     L+P           +S++G+        D A  I  +        +L 
Sbjct: 112 CTRLTSNSDVPELSPPIPVASARGFVWSADGRSIYY----DAAGSIGRISADGRTQTKLA 167

Query: 299 NTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            T+       S +P+ + + F  D      ++++    +  + ++  ++A Y        
Sbjct: 168 VTVPNGYKLLSVAPNGA-MAFT-DSSATAHIWILDPGATALRDLTTGRDAHYSPTT---- 221

Query: 358 GDLIA----FTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKD 411
           G L+     F         I  +         + + +   +Q+ TWSP G  + +S +  
Sbjct: 222 GRLLVLDQVFPPSGQSALTIFAVDTVNGSRTQVTDPTIEFVQSFTWSPDGTQVAYSGESP 281

Query: 412 G---DTGSKLYSIDLNGRNETLI 431
                + + +++  L G     +
Sbjct: 282 NGADRSSTGVFTRSLGGGPRKAV 304


>gi|17229242|ref|NP_485790.1| hypothetical protein all1750 [Nostoc sp. PCC 7120]
 gi|17130840|dbj|BAB73449.1| all1750 [Nostoc sp. PCC 7120]
          Length = 353

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 59/189 (31%), Gaps = 18/189 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP    +A  +   E      ++  +              +    FS +GK   +  Q
Sbjct: 27  AWSPQGNTLAATSAAGE------VVLWQDGELTTLQAGNGQSVDCLAFSPDGKFLAVGGQ 80

Query: 278 KDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + I+    Q       L N        ++S  S+Q+ F   R     + +  ++  
Sbjct: 81  -DGRVKIW----QGQELIATLENAPAWVDKLAWSHASNQLAFSLGR----YVQIWDADTR 131

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +        ++S     W   G  +A     G    I   +    +  +L   +      
Sbjct: 132 EVVTTLNFADSSALSIDWRIDGQYLAIGGNKG--IKIWHAQDWDEEPYILNMPTVSVTMA 189

Query: 397 WSPSGRSLI 405
           WSP G+ L 
Sbjct: 190 WSPDGKFLA 198



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 61/188 (32%), Gaps = 21/188 (11%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVF 318
           + A  +S  G     +    E      V  Q      L      ++   ++SPD   +  
Sbjct: 23  VTAIAWSPQGNTLAATSAAGE-----VVLWQDGELTTLQAGNGQSVDCLAFSPDGKFLA- 76

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
              ++G+ +++     G +     ++  A      WS   + +AF+        + +   
Sbjct: 77  VGGQDGRVKIW----QGQELIATLENAPAWVDKLAWSHASNQLAFSLGR----YVQIWDA 128

Query: 379 DGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           D  +        DS+  +  W   G+ L       G+ G K++          ++N P  
Sbjct: 129 DTREVVTTLNFADSSALSIDWRIDGQYLA----IGGNKGIKIWHAQDWDEEPYILNMPTV 184

Query: 437 ASDPQWVG 444
           +    W  
Sbjct: 185 SVTMAWSP 192



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 27/228 (11%), Positives = 69/228 (30%), Gaps = 31/228 (13%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             + + D D   +       D       +  + Q +A           + +   +     
Sbjct: 121 RYVQIWDADTREVVTTLNFADSSALSIDWRIDGQYLA-----IGGNKGIKIWHAQDWDEE 175

Query: 251 KRIGNFRSMILAPRFSSNGKRAL-------ISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
             I N  ++ +   +S +GK          ++V +    D + +        +L      
Sbjct: 176 PYILNMPTVSVTMAWSPDGKFLASGNMDRSVTVLEWNNPDPWVMRGFPGKIRQL------ 229

Query: 304 NISASYSPDSSQ-----IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               ++S  +++     +   S         +   N   + R+  +         ++P+ 
Sbjct: 230 ----AWSEATTKLGAPILASASVEGIVAWEKLEDENLGWEARVLTNHVGVINAIAFAPKS 285

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
            L+A     G    + +  K     ++L   ++   A  W P G+ + 
Sbjct: 286 FLLASAATDGW---LCLWNKAKEVSQILTGVADGFSALAWHPQGKLIA 330


>gi|238896376|ref|YP_002921114.1| translocation protein TolB precursor [Klebsiella pneumoniae
           NTUH-K2044]
 gi|330011187|ref|ZP_08307006.1| putative oligogalacturonate lyase [Klebsiella sp. MS 92-3]
 gi|238548696|dbj|BAH65047.1| translocation protein TolB precursor [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|328534241|gb|EGF60859.1| putative oligogalacturonate lyase [Klebsiella sp. MS 92-3]
          Length = 391

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 83/250 (33%), Gaps = 27/250 (10%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F  +   + +A   D      YL++     A +              S + K 
Sbjct: 36  NYFYQKCFFNDGSHLLFAGEFDGH-WNYYLLNIASAEAVQLTEGAGDNTFGGFLSPDDKS 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTL----------------FINISAS-YSPDSS 314
                     +++    L      R+++                   I I+ S ++P + 
Sbjct: 95  LYYVKNDRILLEVNLTTLAEREVYRVSDDWVGYGTWVANSDCSKLVGIEIAKSDWTPLND 154

Query: 315 QIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF- 371
             +F           +++ +  S + ++  +++     P++ P     +AF         
Sbjct: 155 WQIFHDFFHKGPHCRLLRVDLRSGESQVIHEEKIWLGHPIYRPFDDHTVAFCHEGPHDLV 214

Query: 372 --AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNG 425
              + ++ +DGS  R +       +     W P G +LI+     G  G  +Y  D  +G
Sbjct: 215 DARMWLVNEDGSHVRKVKAHAPGESCTHEFWVPDGSALIYVSYLKGQQGRTIYRFDPESG 274

Query: 426 RNETLINTPA 435
            NE L+  PA
Sbjct: 275 VNEALMTMPA 284



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 38/190 (20%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG+++R +   +  +      + P+   + Y +
Sbjct: 197 PFDDHTVAFCHEGPHDLVDARMWLVNEDGSHVRKVKAHAPGESCTHEFWVPDGSALIYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---------------I 274
           Y      R +Y  D         +       L   F  +G   +                
Sbjct: 257 YLKGQQGRTIYRFDPESGVNEALMTMPACSHLMSNF--DGTLLVGDGSGTPVDVKDTGGY 314

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFES 320
           S+  D    +Y  ++      R+      + S               S++PD S I+F S
Sbjct: 315 SIDND--PWLYVFNVAEKRYFRVARH---DTSWATVANSRQVTHPHPSFTPDDSAILFSS 369

Query: 321 DREGKEQLYV 330
           D++GK  +Y+
Sbjct: 370 DKDGKPAIYI 379



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 67/235 (28%), Gaps = 39/235 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           ++P      +  +  +      L         + I   +  +  P +   +        +
Sbjct: 149 WTPLNDWQIFHDFFHKGPHCRLLRVDLRSGESQVIHEEKIWLGHPIYRPFDDHTVAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ V+   +   ++             + PD S +++ S  +G++   +Y 
Sbjct: 209 GPHDLVDARMWLVNEDGSHVRKVKAHAPGESCTHEFWVPDGSALIYVSYLKGQQGRTIYR 268

Query: 331 MQSNGS------------------DQKRISQDKEASYFD----PVWSPQGDLIAFTKFSG 368
                                   D   +  D   +  D      +S   D   +     
Sbjct: 269 FDPESGVNEALMTMPACSHLMSNFDGTLLVGDGSGTPVDVKDTGGYSIDNDPWLYVFNVA 328

Query: 369 EKFAIGVMKKDGS-----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           EK    V + D S       R +        P+++P   +++FS  KDG     +
Sbjct: 329 EKRYFRVARHDTSWATVANSRQVTHP----HPSFTPDDSAILFSSDKDGKPAIYI 379



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 37/109 (33%), Gaps = 6/109 (5%)

Query: 288 DLQSNAT-ERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           D  + A   RLT               +  D S ++F  + +G    Y++    ++  ++
Sbjct: 16  DPDTGAEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHWNYYLLNIASAEAVQL 75

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++    + F    SP    + + K       + +      +   + +D 
Sbjct: 76  TEGAGDNTFGGFLSPDDKSLYYVKNDRILLEVNLTTLAEREVYRVSDDW 124


>gi|195176099|ref|XP_002028687.1| GL25364 [Drosophila persimilis]
 gi|194110584|gb|EDW32627.1| GL25364 [Drosophila persimilis]
          Length = 413

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 77/242 (31%), Gaps = 54/242 (22%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  + + RFSP   ++A ++ D      V L + +      R G+  S +    +S
Sbjct: 14  FTGLSGSITQLRFSPEGSQIATSSLDG----SVILWNLKQASRCIRFGSHSSAVYGVAWS 69

Query: 267 SNGKRALISVQKDEAMDIY-------------------SVDLQSNATERLTNTLF----- 302
             G     S   D ++ I+                   S+D+       LT +       
Sbjct: 70  PKGNLVA-SAGHDRSVKIWEPKVRGVSGEFAAHSKPVRSIDVDPTGQMMLTASDDKSVKI 128

Query: 303 -----------------INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                               +A +SP+   I   SD    + L +   N  +  R   ++
Sbjct: 129 WRVAKRQFLSSFSQQTNWVRAAKFSPNGKMIATVSD---DKSLRIYDVNTGECTRTITEE 185

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRS 403
             +     W P G+++A          I +    GSQ   L  V  + +    + PSG  
Sbjct: 186 RGAPRQVAWHPWGNMVAVALGCN---RIKIFDVGGSQLLQLYVVHSAPVNDVAFHPSGNF 242

Query: 404 LI 405
           L+
Sbjct: 243 LL 244



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 70/202 (34%), Gaps = 25/202 (12%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +        I   RFS  G +   +   D ++ ++++   S    R  +        ++S
Sbjct: 12  RHFTGLSGSITQLRFSPEGSQIA-TSSLDGSVILWNLKQASRCI-RFGSHSSAVYGVAWS 69

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS----PQGDLIAFTKF 366
           P  + +   +  +   +++        + R    + A++  PV S    P G  +  T  
Sbjct: 70  PKGNLVA-SAGHDRSVKIW------EPKVRGVSGEFAAHSKPVRSIDVDPTGQ-MMLTAS 121

Query: 367 SGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +   I  +    ++ + L     + + ++A  +SP+G+ +        D   ++Y ++
Sbjct: 122 DDKSVKIWRV----AKRQFLSSFSQQTNWVRAAKFSPNGKMIATVSD---DKSLRIYDVN 174

Query: 423 LNGRNETLINTPAYASDPQWVG 444
                 T+           W  
Sbjct: 175 TGECTRTITEERGAPRQVAWHP 196


>gi|307131180|ref|YP_003883196.1| olgogalacturonate lyase [Dickeya dadantii 3937]
 gi|313104145|sp|P21258|OGL_DICD3 RecName: Full=Oligogalacturonate lyase
 gi|306528709|gb|ADM98639.1| Oligogalacturonate lyase [Dickeya dadantii 3937]
          Length = 388

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 86/245 (35%), Gaps = 33/245 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
               +K++++ +  +D +    +   +   P  +   R+      FS++G + L     D
Sbjct: 1   MAKGKKLSFSFHTYQDSVTGTEV---VRLTPPDVICHRNYFYQKCFSNDGSKLLFGGAFD 57

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + Y +DL++    +LT     N    + SPD   + +  +      L  +  N  ++
Sbjct: 58  GPWNYYLLDLKTQQATQLTEGTGDNTFGGFLSPDDDALYYVKN---VRNLMRVDLNTLEE 114

Query: 339 KRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFA--------------------IGVM 376
             I Q  +       W    D   +   +   E +                     I + 
Sbjct: 115 TNIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFYFTNPCCRLIRID 174

Query: 377 KKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLI--N 432
            K G    +L E+  L  P + P    ++ F  +   D   ++++ I+ +G N   +  +
Sbjct: 175 LKTGEATTILKENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGSNMRKVKEH 234

Query: 433 TPAYA 437
            P  +
Sbjct: 235 APGES 239



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 63/181 (34%), Gaps = 28/181 (15%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 ++   +  ++ DG+N+R +   +  +      + PN   +AY +Y      R  
Sbjct: 207 HEGPHDLVDARMWFINEDGSNMRKVKEHAPGESCTHEFWVPNGSALAYVSYLKGSTNRFI 266

Query: 241 LMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRAL-------ISVQKDEAMDI------YS 286
                +    +++        L   +  +G   +       + V+ D    I      Y 
Sbjct: 267 CSVDPVTLENRQLTEMPPCSHLMSNY--DGTLMVGDGCNAPVDVKDDGGYKIENDPFLYV 324

Query: 287 VDLQSNATERLTNTL-FINI----------SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            ++++    ++        +            S++PD   I+F SD +GK  LY+ +   
Sbjct: 325 FNMKTGKHFQVAQHNTSWEVLEGDRQVTHPHPSFTPDDKHILFTSDVDGKPALYLAKVPD 384

Query: 336 S 336
           S
Sbjct: 385 S 385



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 83/253 (32%), Gaps = 35/253 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  FS +  K+ +     +     YL+D +  +A +              S +   
Sbjct: 36  NYFYQKCFSNDGSKLLFGG-AFDGPWNYYLLDLKTQQATQLTEGTGDNTFGGFLSPDDDA 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASY--SPDSSQIV----------- 317
                      ++  VDL +     +       +   ++  + D +++V           
Sbjct: 95  LYYVKNV---RNLMRVDLNTLEETNIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKP 151

Query: 318 ------FESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
                 F+         +L  +     +   I ++ +     P++ P   + +AF     
Sbjct: 152 LTDWKKFQEFYFTNPCCRLIRIDLKTGEATTILKENQW-LGHPIYRPGDDNTVAFCHEGP 210

Query: 369 EKF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DGS  R + E +  ++ T   W P+G +L +     G T   + S+D
Sbjct: 211 HDLVDARMWFINEDGSNMRKVKEHAPGESCTHEFWVPNGSALAYVSYLKGSTNRFICSVD 270

Query: 423 -LNGRNETLINTP 434
            +   N  L   P
Sbjct: 271 PVTLENRQLTEMP 283



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/197 (9%), Positives = 57/197 (28%), Gaps = 43/197 (21%)

Query: 262 APRFSS-NGKRALISVQKDEA---MDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQ 315
            P +   +        +         ++ ++   +   ++             + P+ S 
Sbjct: 192 HPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGSNMRKVKEHAPGESCTHEFWVPNGSA 251

Query: 316 IVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----------- 362
           + + S  +G     +  +     + +++++    S+    +   G L+            
Sbjct: 252 LAYVSYLKGSTNRFICSVDPVTLENRQLTEMPPCSHLMSNY--DGTLMVGDGCNAPVDVK 309

Query: 363 ---------------FTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGRSL 404
                          F   +G+ F +            +R +        P+++P  + +
Sbjct: 310 DDGGYKIENDPFLYVFNMKTGKHFQVAQHNTSWEVLEGDRQVTHP----HPSFTPDDKHI 365

Query: 405 IFSRKKDGDTGSKLYSI 421
           +F+   DG     L  +
Sbjct: 366 LFTSDVDGKPALYLAKV 382


>gi|260591623|ref|ZP_05857081.1| dipeptidyl-peptidase IV [Prevotella veroralis F0319]
 gi|260536423|gb|EEX19040.1| dipeptidyl-peptidase IV [Prevotella veroralis F0319]
          Length = 744

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 51/148 (34%), Gaps = 24/148 (16%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  S D  Q+V  S   GK    +     +  + +      S+ D   S  G+ +     
Sbjct: 66  ARISEDGRQVVKYSFVTGKPTGVIFDLANAKGENLK-----SFDDYEVSADGNRLLLQTN 120

Query: 367 SGEKFA------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +   +         +      Q + L ++   Q PT+SP G  + F  K      + +Y 
Sbjct: 121 THRIYRRSFTADFYLYDVKTKQLKRLSKEGAEQIPTFSPDGTKIAFVHK------NNIYI 174

Query: 421 IDLNGRNETLINTPAYASD-----PQWV 443
            D  G  ET + T    +      P WV
Sbjct: 175 TD--GDKETQVTTDGEFNKVINGLPDWV 200



 Score = 43.1 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 82/258 (31%), Gaps = 33/258 (12%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKR 252
            D    +    S++     P FSP+  K+A+         D D       D   ++    
Sbjct: 136 YDVKTKQLKRLSKEGAEQIPTFSPDGTKIAFVHKNNIYITDGDKETQVTTDGEFNKVING 195

Query: 253 IGNF-----RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           + ++          A  + ++ K        +  +  YS+ L   +  +L          
Sbjct: 196 LPDWVNEEEFGFNNALAWGADSKTLSWIRYDESKVKTYSLQLFRGSHPQLDAYSVYPGEY 255

Query: 308 SY-SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW----SPQGDLIA 362
           SY  P +       +   K  ++     G+  ++I+    A  + P       P   +I 
Sbjct: 256 SYKYPKAG------EDNSKVSVWSYSLEGASVRQINLPLAADGYIPRIKTTTDPNRVVIY 309

Query: 363 FTKFSGEKFAIGVMKKDGSQERLL--------VEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                 ++  +           LL        V+++ ++  +       ++F   +DG  
Sbjct: 310 TMNRHQDELNLYAANPHTGLCSLLIKEHISKYVQEAAMEGISIMKD--YILFPSDRDGFM 367

Query: 415 GSKLYSIDLNGRNETLIN 432
              LY  + +G+    I+
Sbjct: 368 --HLYLYNKDGKLLRQID 383



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 61/482 (12%), Positives = 155/482 (32%), Gaps = 69/482 (14%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKV---ATNSANYSPVSIAFTKFVS 57
           M   F+      +     ++L+         + A   +      +  ++   I+    + 
Sbjct: 1   MYRIFYTFAMFKLDFMKRIILMCATILTALQLMAGEPISIRDITAGVFAAKRISGVNSLK 60

Query: 58  IDELGGKVSE----VVSKDLQRSDVFNLISQDSFKQKITNP--DSIPRFQDW--NSLGAQ 109
                 ++SE    VV    + S  F           + N   +++  F D+  ++ G +
Sbjct: 61  GTSEYARISEDGRQVV----KYS--FVTGKPTGVIFDLANAKGENLKSFDDYEVSADGNR 114

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           +L+     +  +     +F L+DVK ++  + +              T S D        
Sbjct: 115 LLLQTNTHRIYRRSFTADFYLYDVKTKQ--LKRLSKEGAEQIP----TFSPD-------- 160

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-------RFSPN 222
                ++I FV ++ +     +    +  DG   + +    D +  E         +  +
Sbjct: 161 ----GTKIAFVHKNNIYITDGDKETQVTTDGEFNKVINGLPDWVNEEEFGFNNALAWGAD 216

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +++  YD+  +    L   R         +      + ++   G       + +  +
Sbjct: 217 SKTLSWIRYDESKVKTYSLQLFRGSHPQLDAYSVYPGEYSYKYPKAG-------EDNSKV 269

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSP------DSSQIV-FESDREGKE-QLYVMQSN 334
            ++S  L+  +  ++   L  +    Y P      D +++V +  +R   E  LY    +
Sbjct: 270 SVWSYSLEGASVRQINLPLAADG---YIPRIKTTTDPNRVVIYTMNRHQDELNLYAANPH 326

Query: 335 GSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                 + ++  + Y         S   D I F         + +  KDG   R + + +
Sbjct: 327 TGLCSLLIKEHISKYVQEAAMEGISIMKDYILFPSDRDGFMHLYLYNKDGKLLRQIDKGN 386

Query: 391 NLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS---DPQWVGF 445
                 +    ++    F          ++Y ++ +G+   L     + +      +  F
Sbjct: 387 YDVTAIYGYDEKTGNTYFQAAARKPMQREVYVVNKSGKMTCLSAHEGWNAASFSGDYKYF 446

Query: 446 MD 447
           ++
Sbjct: 447 LN 448


>gi|156361180|ref|XP_001625397.1| predicted protein [Nematostella vectensis]
 gi|156212229|gb|EDO33297.1| predicted protein [Nematostella vectensis]
          Length = 354

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 82/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++Y     ++ +   +FS N + +A ++ D      + +      +  K I   +  I
Sbjct: 55  YQLKYTLTGHNKAVSSVKFSHNGEWLASSSADK----VIKIWGAYDGKFEKTITGHKLGI 110

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +S++ +  + S   D+ + I+  D  +    + L          +++P S+ IV  
Sbjct: 111 SDVAWSTDSRHLV-SASDDKTLKIW--DFATGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 167

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 168 SF---DESVRIWDVKTGKCLKTLPAHSDPVTAVHFNRDGALIVSSSYDG-LCRIW-DTAS 222

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 223 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 264


>gi|167647380|ref|YP_001685043.1| peptidase S9B dipeptidylpeptidase IV subunit [Caulobacter sp. K31]
 gi|167349810|gb|ABZ72545.1| peptidase S9B dipeptidylpeptidase IV domain protein [Caulobacter
           sp. K31]
          Length = 738

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 93/303 (30%), Gaps = 90/303 (29%)

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRI---------------------- 253
             SP+ ++V Y     E  ++  ++  D +     + I                      
Sbjct: 44  ALSPDGKRVTYLKAKPEAANVQDLWAADVKGGEPYRLIDSAALSSGTKELSEAEKARRER 103

Query: 254 --GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
              + R ++    +   G+  L  +  D    +Y   +      RLT T    + A  SP
Sbjct: 104 TRTSARGIVEY-SWDKQGRFILAPLDGD----LYLDSIADGKISRLTETPGDEVDAKVSP 158

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WS 355
               + +  D    + L+V   NG  +K ++ + + +                     WS
Sbjct: 159 KGGYVSYVRD----QNLFVKPLNGGPEKALTTEGKDALSFGTAEFIAQEEMDRFTGYWWS 214

Query: 356 PQGDLIAFTKFSGEKFAI---GVMKKDGSQ-------------------ERLLVEDSNLQ 393
           P   LIA+T+       +     +   G+                     R L  D  + 
Sbjct: 215 PDERLIAYTRVDESGVDVIPRADIGPGGATVVEQRYPRAGRPNAVVDLFVRYLASDKIVH 274

Query: 394 ---AP---------TWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDP 440
               P          WS  G++L   R+       +L + D   G+ +T++      +D 
Sbjct: 275 IDLGPNKDIYVARVDWSADGKTLYVQRQTRDQKTLELIAYDPSTGQGKTILT----ETDA 330

Query: 441 QWV 443
            W+
Sbjct: 331 HWI 333



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 65/209 (31%), Gaps = 60/209 (28%)

Query: 250 PKRIGNFRSMIL----APRFSSNGKRALISVQKDEAM---DIYSVDLQSNATERL----- 297
           P+R+    S+          S +GKR      K EA    D+++ D++     RL     
Sbjct: 26  PERVFADPSLSGPTAKGVALSPDGKRVTYLKAKPEAANVQDLWAADVKGGEPYRLIDSAA 85

Query: 298 --------------------TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                               T+   I +  S+      I+   D +    LY+       
Sbjct: 86  LSSGTKELSEAEKARRERTRTSARGI-VEYSWDKQGRFILAPLDGD----LYLDSIADGK 140

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------- 390
             R++ +      D   SP+G  +++ +       + V   +G  E+ L  +        
Sbjct: 141 ISRLT-ETPGDEVDAKVSPKGGYVSYVRDQ----NLFVKPLNGGPEKALTTEGKDALSFG 195

Query: 391 -----------NLQAPTWSPSGRSLIFSR 408
                            WSP  R + ++R
Sbjct: 196 TAEFIAQEEMDRFTGYWWSPDERLIAYTR 224



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 55/369 (14%), Positives = 115/369 (31%), Gaps = 82/369 (22%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           +F  +P        +I+D     +T   GD     +      VS +   +L V   +G  
Sbjct: 121 RFILAPLDGDLYLDSIADGKISRLTETPGDEVDAKVSPKGGYVSYVRDQNLFVKPLNGGP 180

Query: 203 IRYLTPSRDQILFEP----------------RFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            + LT      L                    +SP+++ +AY   D+  +  +   D   
Sbjct: 181 EKALTTEGKDALSFGTAEFIAQEEMDRFTGYWWSPDERLIAYTRVDESGVDVIPRADIGP 240

Query: 247 DRAPKRIGNFRS----------------------MILAP---------RFSSNGKRALIS 275
             A      +                        + L P          +S++GK   + 
Sbjct: 241 GGATVVEQRYPRAGRPNAVVDLFVRYLASDKIVHIDLGPNKDIYVARVDWSADGKTLYVQ 300

Query: 276 VQKDE--AMDIYSVDLQSNATERL---TNTLFINISASYSP--DSSQIVFESDREGKEQL 328
            Q  +   +++ + D  +   + +   T+  +I ++  + P  D S  ++ S++ G + L
Sbjct: 301 RQTRDQKTLELIAYDPSTGQGKTILTETDAHWIELNDDFRPLKDGS-FLWSSEKSGYKHL 359

Query: 329 YVMQSNGSDQKRISQD--------------KEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           Y   ++G    +++Q               + A +   + +P    I    ++       
Sbjct: 360 YRHAADGKLLAQVTQGDWPVGDLEGVDETRQTAIFTASIDTPIERRIYEVSYAKPGKPNA 419

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           +    G     + E     A ++S            D  T  +    D +G+    I   
Sbjct: 420 LTPAGGWWTAKVAETGGAFAGSYS------------DPKTPPQTALYDASGKRVRWIEEN 467

Query: 435 AYA-SDPQW 442
             A   P W
Sbjct: 468 KLAEGHPYW 476


>gi|148426|gb|AAA24825.1| oligogalacturonate lysase (ogl) [Erwinia chrysanthemi]
          Length = 388

 Score = 60.0 bits (144), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 86/245 (35%), Gaps = 33/245 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
               +K++++ +  +D +    +   +   P  +   R+      FS++G + L     D
Sbjct: 1   MAKGKKLSFSFHTYQDSVTGTEV---VRLTPPDVICHRNYFYQKCFSNDGSKLLFGGAFD 57

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + Y +DL++    +LT     N    + SPD   + +  +      L  +  N  ++
Sbjct: 58  GPWNYYLLDLKTQQATQLTEGTGDNTFGGFLSPDDDALYYVKN---VRNLMRVDLNTLEE 114

Query: 339 KRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFA--------------------IGVM 376
             I Q  +       W    D   +   +   E +                     I + 
Sbjct: 115 TNIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFYFTNPCCRLIRID 174

Query: 377 KKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLI--N 432
            K G    +L E+  L  P + P    ++ F  +   D   ++++ I+ +G N   +  +
Sbjct: 175 LKTGEATTILKENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGSNMRKVKEH 234

Query: 433 TPAYA 437
            P  +
Sbjct: 235 APGES 239



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 63/181 (34%), Gaps = 28/181 (15%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 ++   +  ++ DG+N+R +   +  +      + PN   +AY +Y      R  
Sbjct: 207 HEGPHDLVDARMWFINEDGSNMRKVKEHAPGESCTHEFWVPNGSALAYVSYLKGSTNRFI 266

Query: 241 LMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRAL-------ISVQKDEA------MDIYS 286
                +    +++        L   +  +G   +       + V+ D          +Y 
Sbjct: 267 CSVDPVTLENRQLTEMPPCSHLMSNY--DGTLMVGDGCNAPVDVKDDGGYKTENDPFLYV 324

Query: 287 VDLQSNATERLTNTL-FINI----------SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            ++++    ++        +            S++PD   I+F SD +GK  LY+ +   
Sbjct: 325 FNMKTGKHFQVAQHNTSWEVLEGDRQVTHPHPSFTPDDKHILFTSDVDGKPALYLAKVPD 384

Query: 336 S 336
           S
Sbjct: 385 S 385



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 83/253 (32%), Gaps = 35/253 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  FS +  K+ +     +     YL+D +  +A +              S +   
Sbjct: 36  NYFYQKCFSNDGSKLLFGG-AFDGPWNYYLLDLKTQQATQLTEGTGDNTFGGFLSPDDDA 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASY--SPDSSQIV----------- 317
                      ++  VDL +     +       +   ++  + D +++V           
Sbjct: 95  LYYVKNV---RNLMRVDLNTLEETNIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKP 151

Query: 318 ------FESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
                 F+         +L  +     +   I ++ +     P++ P   + +AF     
Sbjct: 152 LTDWKKFQEFYFTNPCCRLIRIDLKTGEATTILKENQW-LGHPIYRPGDDNTVAFCHEGP 210

Query: 369 EKF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DGS  R + E +  ++ T   W P+G +L +     G T   + S+D
Sbjct: 211 HDLVDARMWFINEDGSNMRKVKEHAPGESCTHEFWVPNGSALAYVSYLKGSTNRFICSVD 270

Query: 423 -LNGRNETLINTP 434
            +   N  L   P
Sbjct: 271 PVTLENRQLTEMP 283



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/197 (9%), Positives = 57/197 (28%), Gaps = 43/197 (21%)

Query: 262 APRFSS-NGKRALISVQKDEA---MDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQ 315
            P +   +        +         ++ ++   +   ++             + P+ S 
Sbjct: 192 HPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGSNMRKVKEHAPGESCTHEFWVPNGSA 251

Query: 316 IVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----------- 362
           + + S  +G     +  +     + +++++    S+    +   G L+            
Sbjct: 252 LAYVSYLKGSTNRFICSVDPVTLENRQLTEMPPCSHLMSNY--DGTLMVGDGCNAPVDVK 309

Query: 363 ---------------FTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGRSL 404
                          F   +G+ F +            +R +        P+++P  + +
Sbjct: 310 DDGGYKTENDPFLYVFNMKTGKHFQVAQHNTSWEVLEGDRQVTHP----HPSFTPDDKHI 365

Query: 405 IFSRKKDGDTGSKLYSI 421
           +F+   DG     L  +
Sbjct: 366 LFTSDVDGKPALYLAKV 382


>gi|218264290|ref|ZP_03478147.1| hypothetical protein PRABACTJOHN_03838 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222127|gb|EEC94777.1| hypothetical protein PRABACTJOHN_03838 [Parabacteroides johnsonii
           DSM 18315]
          Length = 768

 Score = 59.6 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 84/290 (28%), Gaps = 71/290 (24%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNF--RSMIL 261
             +   +    +S +  KV            D    Y + T  D   +++G    +S ++
Sbjct: 116 TGKPIAIRSISWSTDNGKVLIYNNTKRVWRYDTKGDYWVLTLKDGTLRQLGKGLPQSSMM 175

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----------------FIN 304
             +FS +G R       +    IY  D+ S    +LT                       
Sbjct: 176 FAKFSPDGTRVAFVSNNN----IYVEDVASGQITQLTYDGSQTIVNGTFDWVYEEEFACR 231

Query: 305 ISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRIS--------------------- 342
               +SPD   I + +SD +G     ++ +  S    I                      
Sbjct: 232 DGFRWSPDGQYIAYWQSDTKGTGVFDIINNVDSIYPTILHFPYPKAGSTNSAVKVGYLPV 291

Query: 343 QDKEASYFDPVWSPQGDLI---AFTKFSGEKF-----------AIGVMKKDGSQERLLVE 388
                ++ +    P+ + I    F   S E F            + + +   S  + +  
Sbjct: 292 TGGTTTWIEIPGDPRNNYIPRMEFIPGSNELFIQQMNRPQNTNKVWITRIGSSTPQNIFT 351

Query: 389 DSN------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           D++           W        +  ++DG     LY I  +G+    I 
Sbjct: 352 DTDAAWLDTNDNIQWLKDNTWFTWESERDG--WRHLYRISRDGKEIQPIT 399



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 94/287 (32%), Gaps = 41/287 (14%)

Query: 175 SRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQQ 224
           +R+ FVS +   V  +    +  +  DG+  + +       ++E         R+SP+ Q
Sbjct: 184 TRVAFVSNNNIYVEDVASGQITQLTYDGS--QTIVNGTFDWVYEEEFACRDGFRWSPDGQ 241

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +AY   D +      +++      P  +                     +   + A+ +
Sbjct: 242 YIAYWQSDTKGTGVFDIINNVDSIYPTILHFPYPK---------------AGSTNSAVKV 286

Query: 285 YSVDLQSNATE--RLTNTLFINISAS--YSPDSSQIVFE---SDREGKEQLYVMQSNGSD 337
             + +    T    +      N      + P  S  +F    +  +   ++++ +   S 
Sbjct: 287 GYLPVTGGTTTWIEIPGDPRNNYIPRMEFIP-GSNELFIQQMNRPQNTNKVWITRIGSST 345

Query: 338 QKRISQDKEASYFDP----VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            + I  D +A++ D      W        +         +  + +DG + + + + +   
Sbjct: 346 PQNIFTDTDAAWLDTNDNIQWLKDNTWFTWESERDGWRHLYRISRDGKEIQPITKGNFDY 405

Query: 394 APTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                   +   + F    +  T   LYS +L G+ E    +PA   
Sbjct: 406 ISQVGTDLQKGLVYFIASPENYTQRYLYSAELFGKGEVKRLSPADQP 452



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 55/191 (28%), Gaps = 36/191 (18%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE---- 323
           +G     S        ++  D+      RL  T  I    ++  D  +    S  E    
Sbjct: 34  DGDPFAQSEATTAKGRLHLEDVVGG---RLVQTKGIGAM-TWMKDGERY---SRMEPNAE 86

Query: 324 -GKEQLYVMQSNGSDQKRI---------SQDKEASYFDPVWSPQ-GDLIAFTK-----FS 367
            G   +   ++  + ++ I            K  +     WS   G ++ +         
Sbjct: 87  TGGMDIVAYRAKDNRREVIIPSSMFINKETGKPIAIRSISWSTDNGKVLIYNNTKRVWRY 146

Query: 368 GEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             K    V+       R L +    S++    +SP G  + F         + +Y  D+ 
Sbjct: 147 DTKGDYWVLTLKDGTLRQLGKGLPQSSMMFAKFSPDGTRVAFVSN------NNIYVEDVA 200

Query: 425 GRNETLINTPA 435
               T +    
Sbjct: 201 SGQITQLTYDG 211


>gi|326469103|gb|EGD93112.1| hypothetical protein TESG_00667 [Trichophyton tonsurans CBS 112818]
          Length = 1656

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 46/259 (17%), Positives = 81/259 (31%), Gaps = 45/259 (17%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            PS+ +    P FS +   +   +     +    + DT        + N    +    FS 
Sbjct: 941  PSQARQFISPAFSNDGTLITSISGPPRQVKSFRVWDTTTGA----LLNTDESLRDADFSP 996

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFIN--ISASYSPDSSQIVFESDRE 323
            + ++ ++SV     + I   D  +    R+  T     +   S ++SPD   +V      
Sbjct: 997  S-EKLVVSVNCSNTVKIS--DAVTGTVIRVLETTGHGNSEICSVAFSPDGKLLV---VWA 1050

Query: 324  GKEQLYVMQSNGSDQKRI---------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             +  + +         R          + D         +S    LI      G +    
Sbjct: 1051 AQMLVQIWDVESGTMLRTLERCHCPPSTGDSFDMLSHLAFSSDNGLIG-ASIMGARPETW 1109

Query: 375  VMK-----KDGSQERLLVEDSNLQAPTWSPSGRSLIF-----SRKKDGDTGSKLYSID-- 422
             M       DGS    L         T+SP  + + F     +R  D    S LY+ID  
Sbjct: 1110 SMTCIWNAADGSVVYQL---KGCYTYTFSPDSKLIAFRIAGATRILDAGKRSVLYTIDAC 1166

Query: 423  ------LNGRNETLINTPA 435
                  L+G+   +   P 
Sbjct: 1167 IDMAFSLDGKLAVVQAEPG 1185



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 48/348 (13%), Positives = 107/348 (30%), Gaps = 66/348 (18%)

Query: 111  LVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            L   +         ++ FR+          I  K   +     R +      DI   +  
Sbjct: 1177 LAVVQAEPGSPGATQISFRVAATGKSTGVTIYLKGSSTPDVELRHM------DIDHMVFS 1230

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              G          + + +      + + D     +  L  + + +     FSP+   +A 
Sbjct: 1231 PDG----------KLLATYNWACYMRLWDVASGELVELFKNCNSV----SFSPDGTVMA- 1275

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGN----------------------FRSMILAPRFS 266
             +   ++++R++ + T        + N                      +   I A   S
Sbjct: 1276 -SGSPDNLIRIWDVPTPTSGHFIPVINKAKDAIKRLWTAQASEEKIASAYGGNIFALVLS 1334

Query: 267  SNGKRAL---ISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDR 322
             +GK A      +    A  +   D+ S    + +    +IN +  + P   ++V  +D 
Sbjct: 1335 PDGKLAASGGCGLDPTGAPVVIW-DVASGVPLQQSKLNYYINKNILFWPSDKRLV-SADA 1392

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------KFSGEKFAIGVM 376
             G  +L    +   ++  +  +      +    P   L+         +   E++ I   
Sbjct: 1393 CG--RLVSWDAPSLEELPMIDESYRPILNMAILPDKGLVLVALDIYPPELMHEEYHIYDF 1450

Query: 377  KKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G   R L    + ++A  +S  GR +     +      K++S D 
Sbjct: 1451 NT-GKFLRELNGHHAKVEALAFSSDGRLIATGSSR----AVKVWSTDT 1493


>gi|313672822|ref|YP_004050933.1| wd40 repeat, subgroup [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939578|gb|ADR18770.1| WD40 repeat, subgroup [Calditerrivibrio nitroreducens DSM 19672]
          Length = 957

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 82/237 (34%), Gaps = 27/237 (11%)

Query: 185 VSGIIKNSLCVMD-RDGANIRYLTP----SRDQILFEPRFSPNQQKVA---YATYDDEDI 236
           V+G    ++ + + R G  ++ L P      +  ++    SP+ + +A      Y+ ++ 
Sbjct: 59  VTGSDDKTIRIWELRTGKPLKVLRPPVGEGNEGKIYAVAISPDGRHIAAGGRTGYEWDET 118

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             +Y+ D       K I    ++I    FS +GK  +  +  +    I        +  +
Sbjct: 119 DSIYIFDRETGALIKTIKGLPNVITHLSFSKDGKFLVAGLGDNG---IRVYSTDGYSLIK 175

Query: 297 LTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                  ++    +S D   +V  S  +G  +LY      +  K+I        +   +S
Sbjct: 176 EDKDYGHSVYGFDFSSDGRLVV--SSYDGYIRLY--DRRFNLIKKIKAPGGKRPYHISFS 231

Query: 356 PQGDLIAFTKFSGEKFAI-------GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           P G  I           I        + + D S+           + TWS  GR L 
Sbjct: 232 PDGSKIVVGYEDTPNVDIISANDLDVLYRADTSE----FSGCEFFSVTWSYDGRFLY 284


>gi|296803813|ref|XP_002842759.1| will die slowly [Arthroderma otae CBS 113480]
 gi|238846109|gb|EEQ35771.1| will die slowly [Arthroderma otae CBS 113480]
          Length = 557

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 71/208 (34%), Gaps = 14/208 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +++     + +   +FSP+   VA  + D      + + +T             + I
Sbjct: 163 YQEKFVLKGHQRGVSAVKFSPDGTMVASCSAD----ATIKIWNTATGSLIHTFEGHLAGI 218

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S +G+    S   D+++ +++V                  S ++SP  + +V  S
Sbjct: 219 STISWSPDGETIA-SGSDDKSIRLWNVITGKPYPNPFVGHHNYVYSIAFSPKGNMLVSGS 277

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E +++     +   R             +   G LI      G    + +     
Sbjct: 278 Y---DEAVFIWDVRSARIMRSLPAHSDPVAGVDFVRDGTLIVSCAGDG---LVRIWDSAT 331

Query: 381 SQ-ERLLVEDSNLQAPT--WSPSGRSLI 405
            Q  R LV + N    +  +SP+G+ ++
Sbjct: 332 GQCLRTLVHEDNPPVASVKFSPNGKFIL 359



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 64/203 (31%), Gaps = 11/203 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            ++G    +       V S     ++ + +    ++ +        +    +SP+ + +A
Sbjct: 172 HQRGVSAVKFSPDGTMVASCSADATIKIWNTATGSLIHTFEGHLAGISTISWSPDGETIA 231

Query: 228 YATYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             + D      + L +    +  P       + + +  FS  G   + S   DEA+ I+ 
Sbjct: 232 SGSDDK----SIRLWNVITGKPYPNPFVGHHNYVYSIAFSPKGNMLV-SGSYDEAVFIWD 286

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDK 345
           V   +     L           +  D + IV  +   G   + +  S      R +  + 
Sbjct: 287 V-RSARIMRSLPAHSDPVAGVDFVRDGTLIVSCA---GDGLVRIWDSATGQCLRTLVHED 342

Query: 346 EASYFDPVWSPQGDLIAFTKFSG 368
                   +SP G  I      G
Sbjct: 343 NPPVASVKFSPNGKFILAWSLDG 365



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 45/134 (33%), Gaps = 14/134 (10%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD + +   S       + +  +         +   A      WSP G+ IA +    
Sbjct: 181 FSPDGTMVASCS---ADATIKIWNTATGSLIHTFEGHLAGISTISWSPDGETIA-SGSDD 236

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +   +  +   G          +    +  +SP G  L+      G     ++  D+  R
Sbjct: 237 KSIRLWNV-ITGKPYPNPFVGHHNYVYSIAFSPKGNMLV-----SGSYDEAVFIWDV--R 288

Query: 427 NETLINTPAYASDP 440
           +  ++ +    SDP
Sbjct: 289 SARIMRSLPAHSDP 302


>gi|209523160|ref|ZP_03271716.1| WD-40 repeat protein [Arthrospira maxima CS-328]
 gi|209496311|gb|EDZ96610.1| WD-40 repeat protein [Arthrospira maxima CS-328]
          Length = 1717

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 52/290 (17%), Positives = 101/290 (34%), Gaps = 25/290 (8%)

Query: 158  ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            I+ D +         FN +       +VSG    +L + D +           ++ +   
Sbjct: 1221 IASDSFDYCNIHDVSFNPK---NDNILVSGSSDRTLKIWDLEQQREIRTLKGHNEEVLTV 1277

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ + +A  + DD     V +           +   ++ + +  F+ + K  + S  
Sbjct: 1278 LFSPDGEVIASGSRDD----TVKIWGLPDGSLLNTLVGHQNDVWSVAFTPDSKTIV-SAS 1332

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ-SNGS 336
             D ++ ++S      A   +  +     S S++PDS  I       G + L  M   N  
Sbjct: 1333 ADTSVKLWSRTYTPEAKRVIPASDAAIWSLSFTPDSLGIA----TAGNDSLVKMWEINQG 1388

Query: 337  DQKRISQ-----DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDS 390
            DQ  +        +         SPQ          G    I +   DG     L     
Sbjct: 1389 DQPALLWQLEGLGQPRDLNWVTVSPQ-KYQPLVATGGADNTIKLWTTDGEAIATLTGHTE 1447

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             + A  +SP+ ++++ S   D      +   D +G+    ++ PA+ +D 
Sbjct: 1448 PVNAIAFSPT-QNILASASSD----KNVMIWDDDGQLIQTLSIPAFPNDG 1492



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 64/173 (36%), Gaps = 18/173 (10%)

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            R+    S +L    S +G     +   D    ++ +D      + L +   +  S S+S 
Sbjct: 1045 RLQGHTSSVLGVAVSPDGNLIA-TASNDHTAKVWRID--GLWLQDLPHQNSV-TSISFSE 1100

Query: 312  DSSQIVF--ESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFS 367
            DS    F   +  + +  ++V        + +      EA      +SPQGDLIA +   
Sbjct: 1101 DSK---FLGTTTADNQVTIWVWDEQQEKFQYLHNLVGHEALVTRVKFSPQGDLIATSSND 1157

Query: 368  GEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                 I + + DG+  R+L      +    ++  G+ L        D   +L+
Sbjct: 1158 NT---IRLWRPDGTMIRVLEGHTDRVLDVEFNSDGQKLA---SAGKDKTIRLW 1204



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 85/260 (32%), Gaps = 28/260 (10%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            V   DG  ++ L            FS + + +   T D++  + V+       +    + 
Sbjct: 1076 VWRIDGLWLQDLPHQNSVTSI--SFSEDSKFLGTTTADNQVTIWVWDEQQEKFQYLHNLV 1133

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               +++   +FS  G     +   D  + ++  D        L       +   ++ D  
Sbjct: 1134 GHEALVTRVKFSPQGDLIA-TSSNDNTIRLWRPD--GTMIRVLEGHTDRVLDVEFNSDGQ 1190

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEA---------SYFDPVWSPQGDLIAFTK 365
            ++         + + +    G     ++   E          +  D  ++P+ D I  + 
Sbjct: 1191 KLA---SAGKDKTIRLWNREGDLLATLTGHCEGIASDSFDYCNIHDVSFNPKNDNILVSG 1247

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S     I     +  +E   ++  N +  T  +SP G  +    + D     K++ +  
Sbjct: 1248 SSDRTLKIW--DLEQQREIRTLKGHNEEVLTVLFSPDGEVIASGSRDD---TVKIWGLP- 1301

Query: 424  NGRNETLINTPAYASDPQWV 443
            +G    L+NT     +  W 
Sbjct: 1302 DGS---LLNTLVGHQNDVWS 1318



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 101/269 (37%), Gaps = 44/269 (16%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V +G   N++ +   DG  I  LT    + +    FSP Q  +A A+ D      +   D
Sbjct: 1420 VATGGADNTIKLWTTDGEAIATLT-GHTEPVNAIAFSPTQNILASASSDKN---VMIWDD 1475

Query: 244  TRIDRAPKRIGNFR--SMILAPRFSSNGKRALISVQKDEAM----DIYSVDLQSNATERL 297
                     I  F    ++   +F+++G    +++  + A+    ++Y V L     +  
Sbjct: 1476 DGQLIQTLSIPAFPNDGIVSDIQFNADGTILAVAIGNEMAIRATNELYGVVLWRKQGDSW 1535

Query: 298  TNTLFINISAS-----YSPDSSQIVFESDREGKEQLYVMQSNGSDQK---RISQDKEASY 349
             +   I +  S     +SP+   +   S     + + +   NG+ +     ++    A+ 
Sbjct: 1536 ISYPSIPLDESVNNIAFSPELGTLAIAS----GKNVKLWSRNGTPRPDSCPMTAL--ATV 1589

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE----------------RLLVEDSNLQ 393
                +SP G ++A T    +K  +  +K+D  +                   +  +  + 
Sbjct: 1590 RSLSFSPDGQILA-TASDDKKVRLWAVKRDRDKLWPADGCHGIDSVIEPITTINHNVFVN 1648

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +SP G++L  ++         L+S+D
Sbjct: 1649 RIAFSPDGQTLAIAKDNG---KLILWSMD 1674


>gi|183229754|ref|XP_656380.2| prolyl oligopeptidase family protein [Entamoeba histolytica
           HM-1:IMSS]
 gi|169803180|gb|EAL50997.2| prolyl oligopeptidase family protein [Entamoeba histolytica
           HM-1:IMSS]
          Length = 680

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 76/230 (33%), Gaps = 27/230 (11%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--------VQ 277
             + +  +      +  D   +   +        I    +S + K+   +          
Sbjct: 182 HPFVSKLNNMKFEDHPFDILENEPYESPLKPFGGIEQLCWSKDSKKIAYTCKKKVGKEYA 241

Query: 278 KDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFES-DREG----KEQ 327
                DIY  D ++  T  L           + +  YSP   +I + S +R+G    + +
Sbjct: 242 TSTDSDIYVYDTETKTTINLCKDFEPKNYGFDSNPMYSPSGKKIAWVSMERDGYESDRSR 301

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ----- 382
           L +       +  +S+  E++     W      + FT        I +++ +        
Sbjct: 302 LIIFDLGTKKKSFVSEWFESNVESFDWIND-CQMVFTGVWHGLTHIYLIEINNDNELVNH 360

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           E++     + ++  W   G  LI  R+       +LY +DL  +    I+
Sbjct: 361 EQITTGQYDYKSVKW--FGNMLIVKRQSM-IEADELYELDLKTKEIKQIS 407



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 72/191 (37%), Gaps = 26/191 (13%)

Query: 219 FSPNQQKVAYA-------TYDDEDILRVYLMDTRIDRAPKRIGNFR----SMILAPRFSS 267
           +S + +K+AY         Y       +Y+ DT          +F          P +S 
Sbjct: 221 WSKDSKKIAYTCKKKVGKEYATSTDSDIYVYDTETKTTINLCKDFEPKNYGFDSNPMYSP 280

Query: 268 NGKRAL-ISVQKDE----AMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESD 321
           +GK+   +S+++D        +   DL +     ++     N+ +  +  D  Q+VF   
Sbjct: 281 SGKKIAWVSMERDGYESDRSRLIIFDLGTKKKSFVSEWFESNVESFDWINDC-QMVFTGV 339

Query: 322 REGKEQLYVMQSNGSDQ----KRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVM 376
             G   +Y+++ N  ++    ++I+   +  Y    W   G+++   + S  E   +  +
Sbjct: 340 WHGLTHIYLIEINNDNELVNHEQITT-GQYDYKSVKW--FGNMLIVKRQSMIEADELYEL 396

Query: 377 KKDGSQERLLV 387
                + + + 
Sbjct: 397 DLKTKEIKQIS 407



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 61/157 (38%), Gaps = 12/157 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRS 258
            +   P        P +SP+ +K+A+ + +      D  R+ + D    +       F S
Sbjct: 262 CKDFEPKNYGFDSNPMYSPSGKKIAWVSMERDGYESDRSRLIIFDLGTKKKSFVSEWFES 321

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT----ERLTNTLFINISASYSPDSS 314
            + +  + ++  + + +        IY +++ ++      E++T   +   S  +    +
Sbjct: 322 NVESFDWIND-CQMVFTGVWHGLTHIYLIEINNDNELVNHEQITTGQYDYKSVKWF--GN 378

Query: 315 QIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYF 350
            ++ +       ++LY +     + K+IS + +  Y 
Sbjct: 379 MLIVKRQSMIEADELYELDLKTKEIKQISFENDFIYT 415


>gi|21106691|gb|AAM35480.1| dipeptidyl peptidase IV [Xanthomonas axonopodis pv. citri str. 306]
          Length = 827

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 48/354 (13%), Positives = 99/354 (27%), Gaps = 80/354 (22%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           A      +Y     E G     +L   +   + I   +L V D  G     LT    +  
Sbjct: 194 ARARCSKLYAKDKPEPG-----VLSPDKRSEAFIRDWNLWVRDLAGGQETQLTRDGVENF 248

Query: 215 FEP--------------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-------- 252
                             +SP+ +K+A    D      +YL+ T++     +        
Sbjct: 249 GYATDNAGWQHTDNAIVAWSPDSRKIATFQQDQRKTGDMYLVSTKLGHPELQAWKYPLAG 308

Query: 253 ------------------------------------IGNFRSMILAPRFSSNGKRALI-- 274
                                               +     +    +++ + K      
Sbjct: 309 DKDVTMIERVIIDVPTRSVLRLKTPPDQHRSTLCDDVSCSPGLWDDEKWAPDSKTLAFAS 368

Query: 275 SVQKDEAMDIYSVDLQSNATE------RLTNTLFINISASYS--PDSSQIVFESDREGKE 326
           + +  +   +   D  + A          T      ++A+++  P S++ V+ S+R    
Sbjct: 369 TSRFHKQTWLRIADASTGAVRTAFDETVKTYYESGQVAANWAYLPASNEAVWFSERSDWG 428

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKD 379
           QLY+        KR     + +  + +        A+    G           +  +  D
Sbjct: 429 QLYLYDLATGKPKRAITTGQGNVTELLRVDPVTRTAWFVGVGRSAGVDPYYQQLWKVSLD 488

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G +  LL  +    +   SP G   + +          L     +GR  + + T
Sbjct: 489 GGEPVLLTPEPANHSIALSPDGARFVDTYSTSVTPPVTLLREAGDGRTVSTMAT 542


>gi|239608895|gb|EEQ85882.1| transcriptional repressor TUP1 [Ajellomyces dermatitidis ER-3]
          Length = 646

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 73/204 (35%), Gaps = 18/204 (8%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSS 267
            D ++   RFS + + VA        I  V           + + +      I +  FS 
Sbjct: 280 HDSVVCCVRFSNDGKYVATGCNHSAQIFDVATGQLVTALQDESVLDKDGDLYIRSVCFSP 339

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKE 326
           +G+    +  +D+ + ++  D+ +   + + +    +  S  ++ +   I   S   G +
Sbjct: 340 DGRYLA-TGAEDKQIRVW--DIANRTIKHIFSGHEQDIYSLDFARNGRYIASGS---GDK 393

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QER 384
            + +       Q+ I   ++        SP G  +A          + V         ER
Sbjct: 394 TVRLWDIVDGKQELILSIEDG-VTTVAISPDGRFVAAGSLDKS---VRVWDTTTGYLVER 449

Query: 385 LLVEDSNLQ---APTWSPSGRSLI 405
           L   D ++    +  ++P+GR L+
Sbjct: 450 LENPDGHMDSVYSVAFAPNGRDLV 473



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/335 (13%), Positives = 111/335 (33%), Gaps = 54/335 (16%)

Query: 112 VTGRVIKEGKDRLRV-----EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           V   V      +          +++DV   + +   +                    +S+
Sbjct: 283 VVCCVRFSNDGKYVATGCNHSAQIFDVATGQLVTALQD-------------------ESV 323

Query: 167 TGEKGDFNSRILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
             + GD   R +  S       +G     + V D     I+++    +Q ++   F+ N 
Sbjct: 324 LDKDGDLYIRSVCFSPDGRYLATGAEDKQIRVWDIANRTIKHIFSGHEQDIYSLDFARNG 383

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +A  + D      V L D  +D   + I +    +     S +G+    +   D+++ 
Sbjct: 384 RYIASGSGDK----TVRLWDI-VDGKQELILSIEDGVTTVAISPDGRFVA-AGSLDKSVR 437

Query: 284 IYSVDLQSNAT-ERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN----- 334
           ++  D  +    ERL N    +    S +++P+   +V  S  +   +++ +        
Sbjct: 438 VW--DTTTGYLVERLENPDGHMDSVYSVAFAPNGRDLVSGSL-DKTIKMWELTPPRGMVP 494

Query: 335 -----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                G    R  +  +        +P G  +           +          +++++ 
Sbjct: 495 GAGPKGGKCVRTFEGHKDFVLSVCLTPDGRWVMSGSKDRG---VQFWDPATGNAQMMLQG 551

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + +PS    +F+    GD  ++++   ++
Sbjct: 552 HKNSVISVAPSPTGNLFATG-SGDMRARIWRTTMS 585


>gi|193213052|ref|YP_001999005.1| WD-40 repeat protein [Chlorobaculum parvum NCIB 8327]
 gi|193086529|gb|ACF11805.1| WD-40 repeat protein [Chlorobaculum parvum NCIB 8327]
          Length = 241

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 70/193 (36%), Gaps = 24/193 (12%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRALISVQKD-EAMDIYSVDLQSNAT 294
            +YL DT      KRI  ++S     A  FS +GK+ L +   + +  +   + L +N+ 
Sbjct: 4   SIYLWDTLTG---KRIIKYKSSYFFRACAFSPDGKKILATTDVNTDTRNSLLMLLDANSA 60

Query: 295 ERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           E L          +S ++SP+  + +  S       L +  S         +D   + +D
Sbjct: 61  ELLMTIQGHPRDIVSCAFSPNGKKFLSTSL---DSTLKLWDSETGQCINTFEDHIEAVWD 117

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS----PSGRSLIFS 407
             +SP GD I  +        + +   +     +        +P +S      G  +I  
Sbjct: 118 CAFSPDGDKILSSSSD---HTLKLWDVNSGHCLITFSG--HSSPVFSCRFNSDGTRII-- 170

Query: 408 RKKDGDTGSKLYS 420
                D   KL+ 
Sbjct: 171 -SGSSDKTLKLWD 182



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 67/195 (34%), Gaps = 24/195 (12%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              LWD    K+II  K               S   +++        + + +  +  V +
Sbjct: 4   SIYLWDTLTGKRIIKYK---------------SSYFFRACAFSP---DGKKILATTDVNT 45

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
               + L ++D + A +        + +    FSPN +K    + D      + L D+  
Sbjct: 46  DTRNSLLMLLDANSAELLMTIQGHPRDIVSCAFSPNGKKFLSTSLDS----TLKLWDSET 101

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +      +    +    FS +G + L S   D  + ++ V+   +     +       S
Sbjct: 102 GQCINTFEDHIEAVWDCAFSPDGDKIL-SSSSDHTLKLWDVN-SGHCLITFSGHSSPVFS 159

Query: 307 ASYSPDSSQIVFESD 321
             ++ D ++I+  S 
Sbjct: 160 CRFNSDGTRIISGSS 174



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 9/101 (8%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKDGSQE 383
              +Y+  +     + I       +    +SP G  I A T  + +     +M  D +  
Sbjct: 2   NGSIYLWDTLTGK-RIIKYKSSYFFRACAFSPDGKKILATTDVNTDTRNSLLMLLDANSA 60

Query: 384 RLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            LL+       ++ +  +SP+G+  + +     D+  KL+ 
Sbjct: 61  ELLMTIQGHPRDIVSCAFSPNGKKFLSTSL---DSTLKLWD 98


>gi|222527036|ref|YP_002571507.1| hypothetical protein Chy400_3815 [Chloroflexus sp. Y-400-fl]
 gi|222450915|gb|ACM55181.1| conserved hypothetical protein [Chloroflexus sp. Y-400-fl]
          Length = 414

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 77/263 (29%), Gaps = 28/263 (10%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR----- 238
           VV     + L     DG+N + +       L   R+SP+   + Y  + +    R     
Sbjct: 128 VVGAATGDRLVRAALDGSNPQVIYSETGHQLSAVRWSPDGSTI-YLRFQNNREPRDLPDG 186

Query: 239 VYLMDTRIDRAPKRIGNFRSMI----------LAP-RFSSNGKRALISVQKDEAMDIYSV 287
           +Y +          + +                AP  +   G   LI        D   V
Sbjct: 187 LYRIPASGGTLELLLADDPVDDPLNPSRSVRSYAPFLWDPTGTTLLIESFATFYDDCELV 246

Query: 288 --DLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
               Q     R       +     A +  D S  +     +    ++ + +       +S
Sbjct: 247 FWHPQDKTLRRPVTPEGTHSFCGEAVWRGDGSAALLLIGPDTGPGVWQVDAQTGQATALS 306

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVEDSNLQAP---TWS 398
            D   +    +       +A  + +    F +     DG+  R  +     + P    W+
Sbjct: 307 NDGILARAPFLIGNDLLFVAVERVNDGFSFTLTRQSPDGT--RTPLRPPFREIPLLIRWA 364

Query: 399 PSGRSLIFSRKKDGDTGSKLYSI 421
           P G  ++   + +  T  + Y I
Sbjct: 365 PDGSGIVAVVQTNSGTALRWYPI 387



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 11/199 (5%)

Query: 206 LTPSRDQILFEP-RFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           L PSR    + P  + P    +    +AT+ D+  L  +    +  R P       S   
Sbjct: 210 LNPSRSVRSYAPFLWDPTGTTLLIESFATFYDDCELVFWHPQDKTLRRPVTPEGTHSFCG 269

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +  +G  AL+ +  D    ++ VD Q+     L+N   +  +       + ++F + 
Sbjct: 270 EAVWRGDGSAALLLIGPDTGPGVWQVDAQTGQATALSNDGILARAPFLI--GNDLLFVAV 327

Query: 322 R---EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
               +G       QS    +  +            W+P G  I     +    A+     
Sbjct: 328 ERVNDGFSFTLTRQSPDGTRTPLRPPFREIPLLIRWAPDGSGIVAVVQTNSGTALRWYPI 387

Query: 379 DGSQERLLVEDSNLQAPTW 397
                  L +    +  +W
Sbjct: 388 GNQPAVALPQT--DEGVSW 404



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 41/131 (31%), Gaps = 20/131 (15%)

Query: 280 EAMDIYSVDLQSNATERLTNTL----------FINISASYSPDSSQIVFESDREGKEQLY 329
           +   I  ++       +LT              +++  +     + +++       ++L 
Sbjct: 84  DRGQIARIESDGATRRQLTRERIEQTGIPPISDMDVHPT-----AGLIYVVGAATGDRLV 138

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQER 384
               +GS+ + I  +         WSP G  I     +  +       +  +   G    
Sbjct: 139 RAALDGSNPQVIYSETGHQLSAVRWSPDGSTIYLRFQNNREPRDLPDGLYRIPASGGTLE 198

Query: 385 LLVEDSNLQAP 395
           LL+ D  +  P
Sbjct: 199 LLLADDPVDDP 209


>gi|302818436|ref|XP_002990891.1| hypothetical protein SELMODRAFT_161256 [Selaginella moellendorffii]
 gi|300141222|gb|EFJ07935.1| hypothetical protein SELMODRAFT_161256 [Selaginella moellendorffii]
          Length = 548

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 83/205 (40%), Gaps = 18/205 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +  + D  ++  +FS + + +A A+ D   I+   + D  + R     G+ +S+     
Sbjct: 214 QVLEAHDNEVWYLQFSRDGRHLASASKDCTAIIWEVVDDDFVRRKHTLAGHHKSVSF-VA 272

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDR 322
           +S +    L     +EA+ ++  D  +   +  T     +   S ++ PD    V     
Sbjct: 273 WSPDDSMILTCGT-EEAVKLW--DTATGECKH-TFQKASHGFTSCAWFPDGKTFV----- 323

Query: 323 EGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            G     +Y    +G++ + + + +     D   +P G+ +       +   I V   + 
Sbjct: 324 TGAVDKCMYRWDLSGAELE-VWKPRMPRIIDLAVTPDGNNVVCICHDKD---IRVFNLED 379

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI 405
             ERL+ ED ++ + + S  GR L+
Sbjct: 380 KTERLIEEDHSITSLSVSLDGRYLL 404



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 85/292 (29%), Gaps = 60/292 (20%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V+D D    ++      + +    +SP+   +            V L DT          
Sbjct: 249 VVDDDFVRRKHTLAGHHKSVSFVAWSPDDSMILTC----GTEEAVKLWDTATGECKHTFQ 304

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                  +  +  +GK   ++   D+ M  +  DL     E     +   I  + +PD +
Sbjct: 305 KASHGFTSCAWFPDGKT-FVTGAVDKCMYRW--DLSGAELEVWKPRMPRIIDLAVTPDGN 361

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI------------- 361
            +V        + + V       ++ I  +++ S      S  G  +             
Sbjct: 362 NVVCI---CHDKDIRVFNLEDKTERLI--EEDHSITSLSVSLDGRYLLVNLVSQEIHLWD 416

Query: 362 ------------------------------AFTKFSGEKFAIGVMKKDGSQ--ERLLVED 389
                                         AF     E   + +  +   +  E L    
Sbjct: 417 MALNSRSPCKYKGHRQGRYVIRSCFGGSDHAFIVSGSEDSQVYIWHRGNGELLEVLPGHS 476

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             +   +W+PS    +F+   D D   +++ +    R+    ++ A A  P+
Sbjct: 477 GTVNCVSWNPSNPH-MFASASD-DHTIRIWGLSSTKRDRHRRSSAA-APTPK 525


>gi|254415913|ref|ZP_05029670.1| hypothetical protein MC7420_1016 [Microcoleus chthonoplastes PCC
           7420]
 gi|196177340|gb|EDX72347.1| hypothetical protein MC7420_1016 [Microcoleus chthonoplastes PCC
           7420]
          Length = 813

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 68/203 (33%), Gaps = 11/203 (5%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +      P+ + +     D    ++++ + +      +++      +L   
Sbjct: 523 STFTGLSGKVSAIAIHPHGRTLLSCGGD--STIKIWDIISLNSTPIQQLNGHSGGVLTLT 580

Query: 265 FSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            S +G+    S Q      I   +L Q      L+       S + SPD+  +       
Sbjct: 581 LSRDGQILASSDQSKNRSYIKVWNLHQGKLLWTLSGHRKQIHSLAISPDNHTLA-----S 635

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  ++ +   N  +  R     +   +    SP G  +  +    +   I  +   G   
Sbjct: 636 GSHKIKLWNLNTGEPFRTLFGHKEWVYSLAISPDGQSLV-SGSGDKTVKIWKL-ATGELL 693

Query: 384 RLLV-EDSNLQAPTWSPSGRSLI 405
           R L    ++++A   SP G++++
Sbjct: 694 RTLSGHKASIRAVAISPDGQTIV 716



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 66/178 (37%), Gaps = 13/178 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++ SG  K  L  ++  G   R L   ++ +      SP+ Q +   + D      V +
Sbjct: 631 HTLASGSHKIKLWNLN-TGEPFRTLFGHKEWVYSL-AISPDGQSLVSGSGDK----TVKI 684

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
                    + +   ++ I A   S +G+  + S  +D+ + ++  D ++      LT+ 
Sbjct: 685 WKLATGELLRTLSGHKASIRAVAISPDGQTIV-SGSEDKTIKLW--DFETGKLLTTLTDH 741

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                + + S D   ++  S+    + + +   +  +  +  +D  A  +       G
Sbjct: 742 TGAVYAIALSLDGDYLISGSE---DKTIKIWHLHREELMQTLEDHTAPVYALAIGGDG 796


>gi|189467215|ref|ZP_03016000.1| hypothetical protein BACINT_03599 [Bacteroides intestinalis DSM
           17393]
 gi|189435479|gb|EDV04464.1| hypothetical protein BACINT_03599 [Bacteroides intestinalis DSM
           17393]
          Length = 487

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 82/265 (30%), Gaps = 57/265 (21%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------- 278
            +          +Y  D ++ +   +  +    +     S +G+  + +  +        
Sbjct: 183 TFMHMRGSKGGTIYSRDGQLRKINTKTDHTAGAVYG-EISQDGRFGIFTTAEIIPILHSY 241

Query: 279 --------DEAMDIYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFE----- 319
                   D+  D+  +D +      +T+   I           +S ++  I F      
Sbjct: 242 RTERLEVFDKCSDLILIDFEQGT---VTDNPGISGTEYQETFPCFSANNHTIYFCRAPYI 298

Query: 320 ----SDREGKEQLYVMQSNGSDQK---------RISQDKEASYFDPVWSPQGDLIAFTKF 366
               S R  +  LY +  N    +         R S + + S   P  SP G  + F+  
Sbjct: 299 PQPDSTRHMRYDLYSISFNPQTGQLGDSIHEVFRASSEGK-SVSFPKCSPDGKYLLFSVS 357

Query: 367 SGEKFAI-------GVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGS 416
               F I        +++    +   + E +   +    +WS + + + F+ K+D     
Sbjct: 358 DYGTFPIWHPETDLWMLELSTGKIDKMEETNGRYSDSYHSWSSNSQWIAFASKRDDRVYG 417

Query: 417 KLY--SIDLNGRNETLINTPAYASD 439
           + Y   +  +G        P    +
Sbjct: 418 RPYFAHVSQDGSVSKAFLLPQENPE 442



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 29/160 (18%)

Query: 209 SRDQILFEPRFSPNQQKVAYATY------DDEDILRVYLMDTRIDRAPKRIGNF------ 256
             +     P FS N   + +         D    +R  L     +    ++G+       
Sbjct: 273 GTEYQETFPCFSANNHTIYFCRAPYIPQPDSTRHMRYDLYSISFNPQTGQLGDSIHEVFR 332

Query: 257 ----RSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERL--TNTLFI 303
                  +  P+ S +GK  L SV             D++ ++L +   +++  TN  + 
Sbjct: 333 ASSEGKSVSFPKCSPDGKYLLFSVSDYGTFPIWHPETDLWMLELSTGKIDKMEETNGRYS 392

Query: 304 NISASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQK 339
           +   S+S +S  I F S R+    G+     +  +GS  K
Sbjct: 393 DSYHSWSSNSQWIAFASKRDDRVYGRPYFAHVSQDGSVSK 432


>gi|148658407|ref|YP_001278612.1| hypothetical protein RoseRS_4324 [Roseiflexus sp. RS-1]
 gi|148570517|gb|ABQ92662.1| hypothetical protein RoseRS_4324 [Roseiflexus sp. RS-1]
          Length = 620

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 84/221 (38%), Gaps = 27/221 (12%)

Query: 191 NSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE---DILRVYLMDTRI 246
           ++L V++ D GA  +   P R +   +P  SP+   +AYA  +       LR++ +    
Sbjct: 331 STLWVLELDSGAVRQLTPPPRGRSCADPAMSPDGTTIAYAVDESGVSPPQLRIFSVQIFP 390

Query: 247 DRAPKRIGNFRSMIL--APRFSSNGKRALISVQKDEAMDIYSVDLQSNATE----RLTNT 300
                 +          AP++  + +    +  +D    ++  +      +     L + 
Sbjct: 391 GAPAVALTPSGDEWSRYAPQWLDDARIVYAATAEDGRQTLFLREPDGTELDIGMGLLVSG 450

Query: 301 LFINISASY--------SPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +    SA Y         P+ S I  E+   DR G + L ++   G++ +R+S      +
Sbjct: 451 IGGQRSARYRGFGRMLADPNGSAIAVEALRIDRPGAD-LLILNPTGAEIERLSPIAAGFW 509

Query: 350 FDP-VWSPQGD--LIAFTKFSGEKFA--IGVMKKDGSQERL 385
             P  WS  G    ++    SG  F   + V   DG+   +
Sbjct: 510 NRPVAWSADGALYYLSTACASGAVFEYTLHVRTLDGADRVI 550



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 22/132 (16%)

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWS----PQGDLIAFTKFSGEKFA--------IGVMK 377
           + + +    + +++   A  F  V +        LIAF   +    A        + V++
Sbjct: 278 IWRLSNGTAENLTESVRAGQFGDVTALTARADRRLIAFCATAPGAIAADVTAASTLWVLE 337

Query: 378 KDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            D    R L       +   P  SP G ++ ++  + G +  +L    +    +     P
Sbjct: 338 LDSGAVRQLTPPPRGRSCADPAMSPDGTTIAYAVDESGVSPPQLRIFSV----QIFPGAP 393

Query: 435 AYASDPQ---WV 443
           A A  P    W 
Sbjct: 394 AVALTPSGDEWS 405


>gi|45382387|ref|NP_990203.1| WD repeat and SOCS box-containing protein 1 [Gallus gallus]
 gi|4754058|gb|AAD28807.1|AF072879_1 SOCS box-containing WD protein SWiP-1 [Gallus gallus]
          Length = 421

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 66/180 (36%), Gaps = 15/180 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                     ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 211 RGHQNWVYGCAFSPDSSILC---SVGASKAVFLWDMDKYSMIRKLEGHHNDVVACEFSPD 267

Query: 358 GDLIAFTKFSGEKFA----IGVMKKD-GSQERLLV-------EDSNLQAPTWSPSGRSLI 405
           G L+A   +    +     IGV+ ++ G               D  +++ ++S  G  + 
Sbjct: 268 GALLATASYDTRVYVWDPYIGVILREFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHIA 327



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 34/256 (13%), Positives = 80/256 (31%), Gaps = 41/256 (16%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++             + HT   ++ + +T      +  ++ VS S   
Sbjct: 151 RIKIWDVYTGKLLLNL-----------MDHT---EVVRDLTFAP---DGSLILVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L D   
Sbjct: 194 TL---RVWDLKDDG-NMMKVLRGHQNWVYGCAFSPDSSILCSV----GASKAVFLWDMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----AMDIYSVDLQSN----ATERLT 298
               +++    + ++A  FS +G     +            I  +  +          + 
Sbjct: 246 YSMIRKLEGHHNDVVACEFSPDGALLATASYDTRVYVWDPYIGVILREFGHLFPPPTPIF 305

Query: 299 NTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                +    S S+S D   I   +D    + +   + +     +++           +S
Sbjct: 306 AGGANDRWVRSVSFSHDGLHIASLAD---DKMVRFWRIDEEYPVQVAPLNNG--LCCTFS 360

Query: 356 PQGDLIAFTKFSGEKF 371
             G ++A     G   
Sbjct: 361 TDGSVLAAGTQDGSVH 376



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 34/99 (34%), Gaps = 4/99 (4%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 149 NGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 208

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +L    N      +SP   S++ S          L+ +D
Sbjct: 209 VLRGHQNWVYGCAFSPDS-SILCS--VGASKAVFLWDMD 244


>gi|326472267|gb|EGD96276.1| chromosome segregation protein [Trichophyton tonsurans CBS 112818]
          Length = 852

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 75/213 (35%), Gaps = 23/213 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S +++ VA A+    D L V +++       K + +    +    F  +G+   +S  
Sbjct: 104 AISKDEEWVAVAS----DELTVKIVNINDITEVKYLRDQTKGVKHVTFDPSGRFVTVS-C 158

Query: 278 KDEAMDIYS--------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            D  + IYS        +        +L        SA + PD +   F +    ++   
Sbjct: 159 ADGIIYIYSFTETEPRLLHKLDGVIRQLETDNEATSSAVWHPDGT--AFAAVETTRDITV 216

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +   + + Q++ S           WSP G L+A    +G    I + +    +     + 
Sbjct: 217 ISSRDWTKQQKFSGGHNGDVTCLAWSPNGALLA---SAGADRKILLWETRTQKVIKTYDI 273

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            N+    W P+   + F+         +L+  D
Sbjct: 274 PNVINFRWHPTQNVVAFTTSDG-----ELFIYD 301


>gi|168699811|ref|ZP_02732088.1| WD-40 repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 1103

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 96/299 (32%), Gaps = 51/299 (17%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           R+WD+   +++  ++     A  R +A   S D                     ++V+G 
Sbjct: 593 RVWDLDTGREL-SEQADGHDAPVRAVA--FSPD-------------------GRTLVTGG 630

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               + V D   A +R +   +        FSP+  ++  A    +      + D     
Sbjct: 631 ENQQIRVWDA--ARLRPVGQLKGYSAQHVAFSPDSSRLLTAWDWSKSAR---VWDINRGN 685

Query: 249 APKRIGNFRSMIL-APRFSSNGKRAL-ISVQKDEAMDIYSV----------DLQSNATER 296
                G      L A  F+  GK  + +S + +    + +           D  +    R
Sbjct: 686 KLLDFGPVEGERLPAAAFAREGKTVVTVSWRWNGEKPVPNAPRTIGLFGTWDAATGKRIR 745

Query: 297 LTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             +   + N   + SPD          +G+  L++       ++R+S     +     +S
Sbjct: 746 EASLPGVGNTVLALSPDGRLAA--VGGQGEAPLWLCDIARGHERRLSYTPWDTVKGVAFS 803

Query: 356 PQGDLIAF------TKFSGEKFA---IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           P G L+A           G       I  +       +L   +  + A  ++P GR L 
Sbjct: 804 PDGRLLATGGIDREHVVGGGTHHRPRIWEVSTGREVLQLAGHERTVTALAFAPGGRVLA 862



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 55/383 (14%), Positives = 116/383 (30%), Gaps = 62/383 (16%)

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           VV+  L  +   +           +   S+ R      +    L  G V + G  R R E
Sbjct: 257 VVAAGLA-TG--DPPRPADVPAPRSAEKSVERPAA-RDVRGDPLPVGAVARLGSARWRHE 312

Query: 128 FR---LWDVKDRKQIIGKKFFSSPASWRKIAHTIS------DDIYQSITGEKGDFNSRIL 178
                L    D K +                H+IS            I    G F+  ++
Sbjct: 313 GEAESLAFAPDGKTLAVLSLND---------HSISLFETTTGKTVHRIAFPDGTFDPSVV 363

Query: 179 FVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRDQILFEPR------FSPNQQKVAYATY 231
             S   +    +     V   D  + + +   +      P       FSPN + +A +  
Sbjct: 364 AFSPDGLLFACRGGDGTVYLWDAQSRKLVHTLKSVGGEGPGRWSPVVFSPNGKFLAASA- 422

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                  + + D    +    +   +    +  FS +G+   ++ Q      +   D  +
Sbjct: 423 ---GPNLIAIWDAVKGKHAVTVTGHQHANPSMAFSRDGRHLAVATQ---NPVVQLFDAAT 476

Query: 292 NATERLTNTLFINIS------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                       +         ++SPD   I       GK+ + +  +     K + + +
Sbjct: 477 GK-----RAGGFDPGQRFALCLAFSPDGKVIA----TGGKDMIVLSDAVTG--KELGRME 525

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPSGRS 403
                +  ++P G  +      GE   + V      +ER +++       +   S  G++
Sbjct: 526 MKQVLNVAFAPDGKALVSV---GEDCKVRVWDVATKRERRVLDGRGWLGRSMALSADGKT 582

Query: 404 LIFSRKKDGDTGSKLYSIDLNGR 426
           +      +     +++ +D  GR
Sbjct: 583 VALGSVHN---VVRVWDLD-TGR 601



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 51/150 (34%), Gaps = 20/150 (13%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL------R 238
           V G  +  L + D    + R L+ +    +    FSP+ + +A    D E ++      R
Sbjct: 768 VGGQGEAPLWLCDIARGHERRLSYTPWDTVKGVAFSPDGRLLATGGIDREHVVGGGTHHR 827

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL--------- 289
             + +    R   ++      + A  F+  G+        D   ++ S+           
Sbjct: 828 PRIWEVSTGREVLQLAGHERTVTALAFAPGGRVLA---TADGDDNLPSLPPGPQTIRFWD 884

Query: 290 --QSNATERLTNTLFINISASYSPDSSQIV 317
                   RL        S ++S D +Q+V
Sbjct: 885 VGSGKELARLGGHHSNVTSLAFSKDGTQLV 914



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 58/177 (32%), Gaps = 18/177 (10%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGKEQLYV 330
           SV++  A D+    L   A  RL +          S +++PD   +   S  +    L+ 
Sbjct: 282 SVERPAARDVRGDPLPVGAVARLGSARWRHEGEAESLAFAPDGKTLAVLSLNDHSISLFE 341

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             +  +  +    D         +SP G L A     G    + +      +    ++  
Sbjct: 342 TTTGKTVHRIAFPDGTFDPSVVAFSPDGLLFA---CRGGDGTVYLWDAQSRKLVHTLKSV 398

Query: 391 NLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             + P       +SP+G+ L  S    G     ++  D       +  T    ++P 
Sbjct: 399 GGEGPGRWSPVVFSPNGKFLAASA---GPNLIAIW--DAVKGKHAVTVTGHQHANPS 450



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 44/134 (32%), Gaps = 6/134 (4%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R++++T  D +        G   +      E VV G   +   + +             +
Sbjct: 787 RRLSYTPWDTVKGVAFSPDGRLLATGGIDREHVVGGGTHHRPRIWEVSTGREVLQLAGHE 846

Query: 212 QILFEPRFSPNQQKVAYATYD------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           + +    F+P  + +A A  D            +   D    +   R+G   S + +  F
Sbjct: 847 RTVTALAFAPGGRVLATADGDDNLPSLPPGPQTIRFWDVGSGKELARLGGHHSNVTSLAF 906

Query: 266 SSNGKRALISVQKD 279
           S +G + +  +   
Sbjct: 907 SKDGTQLVAGMSNG 920


>gi|322693574|gb|EFY85429.1| Pfs, NACHT and WD domain protein [Metarhizium acridum CQMa 102]
          Length = 1499

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 74/210 (35%), Gaps = 27/210 (12%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              S + + +A A+   ED + ++   T     P  IG   + I+   FS++    + + +
Sbjct: 1269 TISVSGKLIASAS---EDAIHIWNGCTGRHEKPLDIGEEHNSIIWLAFSADESMLVATSE 1325

Query: 278  KDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +     I   DL+++   R  +       SA +SPD   +   SD    + + V      
Sbjct: 1326 EGG---ILVWDLEASTQPRWCHAHEDWVRSAVFSPDGKLLASVSD---DKHVKVWNLFSD 1379

Query: 337  DQKRISQDKE-------ASYFDPVWSPQGDLIAFTKFSGEKFAIG----VMKKDGSQERL 385
             QK + + K               +S  G  IA      +   I     V  +DG     
Sbjct: 1380 PQKCLEKQKPSIFKSHTGFVICIAFSADGKYIA--SGGDDGVRIWDLTSVAHQDGEGNTE 1437

Query: 386  LVED----SNLQAPTWSPSGRSLIFSRKKD 411
            L         + A  +SP G  L+ S   D
Sbjct: 1438 LSRFQGHCGRVTAVAFSPDGEVLVSSSWDD 1467



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 53/140 (37%), Gaps = 16/140 (11%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA--- 249
            + V D + +       + +  +    FSP+ + +A  + D    ++V+ + +   +    
Sbjct: 1329 ILVWDLEASTQPRWCHAHEDWVRSAVFSPDGKLLASVSDD--KHVKVWNLFSDPQKCLEK 1386

Query: 250  --PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV------DLQSN-ATERLTNT 300
              P    +    ++   FS++GK        D+ + I+ +      D + N    R    
Sbjct: 1387 QKPSIFKSHTGFVICIAFSADGKYIA--SGGDDGVRIWDLTSVAHQDGEGNTELSRFQGH 1444

Query: 301  LFINISASYSPDSSQIVFES 320
                 + ++SPD   +V  S
Sbjct: 1445 CGRVTAVAFSPDGEVLVSSS 1464



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 57/180 (31%), Gaps = 7/180 (3%)

Query: 190  KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              ++ + D     ++ L    D+      FSP+           E       +  +  + 
Sbjct: 968  DKTVRIWDAHTGELQVLLDGFDEWAHLVTFSPSGLLATAGESVIEIWDYRLSVLEKTFKK 1027

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
               +    S I   +FS  G +   ++       ++  D ++   E+      I    ++
Sbjct: 1028 RDLLPGEESEISHLKFSPKGDQLAAAI----GKTVFIWDTRTYEAEKWERQECIE-QLTF 1082

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            S D   +   +  +    + +++   S   R+ ++         +SP    +A     G 
Sbjct: 1083 SADGRLLAIATLFDIT--ILLVEDGTSKWSRLLENNTEKINGICFSPDSKSMASCSTDGT 1140



 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 67/219 (30%), Gaps = 25/219 (11%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRA--PKRIGN-FRSMILAPRFSSNGKRALIS 275
            FS +  + A A    +    +   + +      P +I +     + +  +S   +  + S
Sbjct: 1168 FSAHGLRFAAAADKGKGTNSIEFWNIQGTGYDAPHQITSCLAPSVFSLSYSPTEQELVSS 1227

Query: 276  ----------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
                      ++   +  +   D+  +   R+          + S     I   S+    
Sbjct: 1228 YAGKVAHIWNLENASSPVLDVSDIAGDVMPRV-QHKKNVSFVTISVSGKLIASASE---- 1282

Query: 326  EQLYVMQS-NGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            + +++     G  +K +   +E +      +S    ++  T   G    I V   + S +
Sbjct: 1283 DAIHIWNGCTGRHEKPLDIGEEHNSIIWLAFSADESMLVATSEEGG---ILVWDLEASTQ 1339

Query: 384  RLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYS 420
                        +  +SP G+ L             L+S
Sbjct: 1340 PRWCHAHEDWVRSAVFSPDGKLLASVSDDKHVKVWNLFS 1378


>gi|296422399|ref|XP_002840748.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295636971|emb|CAZ84939.1| unnamed protein product [Tuber melanosporum]
          Length = 828

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 77/215 (35%), Gaps = 29/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   VA A+    D   V +++   +     + +    +    F   G    +S  
Sbjct: 104 ALSPDGDWVAVAS----DETIVKVVNVEDNHKIMNLRSQSQSVKHVAFHPTGNYLAVS-C 158

Query: 278 KDEAMDIYSVDLQSNATERLTNT--LFINISA------SYSPDSSQIVFESDREGKEQLY 329
            D  + IYS+  +     +  +     ++  +      S+ PD     F +    ++ + 
Sbjct: 159 VDGVIYIYSLSTEEPELVKKVDGIIKAVDAESEICSKVSWHPDGR--AFAAQTPTRDIIV 216

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V ++     K  +        D  WSP G  +A +  +  K  I       ++E+ ++  
Sbjct: 217 VDRAKWETHKAFASGHAGDITDFAWSPNGAFLA-SAGTDGKLVIW-----ETEEQTIIAK 270

Query: 390 SNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + +      W P   S+ F+  +      +LY++
Sbjct: 271 YDYRHIVSLAWHPKHNSISFTTSRG-----ELYTL 300



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 71/204 (34%), Gaps = 24/204 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---- 262
             S+ Q +    F P    +A +  D   ++ +Y + T      K++      + A    
Sbjct: 135 LRSQSQSVKHVAFHPTGNYLAVSCVD--GVIYIYSLSTEEPELVKKVDGIIKAVDAESEI 192

Query: 263 ---PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIV 317
                +  +G+    + Q     DI  VD     T +   +         ++SP+ + + 
Sbjct: 193 CSKVSWHPDGR--AFAAQ-TPTRDIIVVDRAKWETHKAFASGHAGDITDFAWSPNGAFLA 249

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             +  +GK  ++       +Q  I++          W P+ + I+FT   GE + +    
Sbjct: 250 -SAGTDGKLVIW----ETEEQTIIAKYDYRHIVSLAWHPKHNSISFTTSRGELYTLPNAV 304

Query: 378 KDGSQERLLVEDS-----NLQAPT 396
            D    RL +        N   P+
Sbjct: 305 PDDRAFRLKLTTRLAPLLNDSGPS 328


>gi|239993222|ref|ZP_04713746.1| WD40 domain-containing protein [Alteromonas macleodii ATCC 27126]
          Length = 1157

 Score = 59.6 bits (143), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 94/270 (34%), Gaps = 55/270 (20%)

Query: 211 DQILFEPRFSPNQQKVAYATY-------DDEDILRVYLMDTRIDRAPKRI--------GN 255
           +   F P  S + + + + +        +         +    +   + +        G+
Sbjct: 509 NDDSFNPSISDDGRYITFVSEATNLTTDEINSYYYHVFLYDNTEDTIELVSKTDASWDGS 568

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAM-------DIYSVDLQSNATERLTNTLFI----- 303
                + P  S NGK  +   Q D           I   D+ +     ++  L       
Sbjct: 569 DAGSSVNPTISGNGKYVVYESQNDAVWGFSSYYQQIVVYDVATKTNRVVSQNLDNALGNR 628

Query: 304 -NISASYSPDSSQIVFESDRE---------GKEQLYVMQSNGSDQKRISQDKEAS----Y 349
            + SA+ S D   I+FE+  +             + +   N  +   IS DK+ +    Y
Sbjct: 629 QSYSANISADGMTIIFETQADNLVAGFGGYSSPFIAMYNVNEGEVSAISSDKDGTLFSAY 688

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-------SNLQAPTWSPSGR 402
                S  G+++AF   +G+   + V++ D     ++ +D       ++L  P  +  G 
Sbjct: 689 GGASISGNGEIVAFNYVNGDSMGVVVIETDSMSSSIINDDVSTYYQRTSLFNPAINNDGS 748

Query: 403 SLIFSRKKD--GDTGSK-----LYSIDLNG 425
            +++S K    GDT  +     + + D +G
Sbjct: 749 IVVYSSKTRDLGDTAGEFTQPYIATTDADG 778



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 89/278 (32%), Gaps = 64/278 (23%)

Query: 220 SPNQQKVAYATY---------DDEDILRVYLMD---TRIDRAPKRIGNFRSMILAPRFSS 267
           S + + VA+ +          D+ D +  Y MD         PK +G+F  +  +   S 
Sbjct: 344 SGDGKFVAFHSQGQTFDLLDRDNADDVYFYSMDDDSLTTLSKPKSLGSFDDVD-SVAVSK 402

Query: 268 NGKRALISVQ--------KDEAMDIYSVDLQSNATERLT-NTLFINISASY------SPD 312
           +G+  L                 +++  D Q   TE++   +   + +  +      S D
Sbjct: 403 SGRFILYKTDDRLLSDTGNSYYDELFLYDRQEGTTEQIRLGSRGADANGGFGEIFDISAD 462

Query: 313 SSQIVFES--------DREGKEQLYVMQSNGSDQKRISQDKEA-----SYFDPVWSPQGD 359
            + I F S        D   +  ++  Q +      +S            F+P  S  G 
Sbjct: 463 GNVITFASRASNIHTDDVNSQWDVFRYQRDTGQLVLVSVGSTGVAANDDSFNPSISDDGR 522

Query: 360 LIAFTKFSGEK---------FAIGVMKKDGSQERLLVED---------SNLQAPTWSPSG 401
            I F   +            + + +         L+ +           +   PT S +G
Sbjct: 523 YITFVSEATNLTTDEINSYYYHVFLYDNTEDTIELVSKTDASWDGSDAGSSVNPTISGNG 582

Query: 402 RSLIFSRKKDGDTG-----SKLYSIDLNGRNETLINTP 434
           + +++  + D   G      ++   D+  +   +++  
Sbjct: 583 KYVVYESQNDAVWGFSSYYQQIVVYDVATKTNRVVSQN 620



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 59/358 (16%), Positives = 105/358 (29%), Gaps = 82/358 (22%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS---R 210
            ++  SD  + S  G    F S    +     +      L     D   +  +       
Sbjct: 34  FSNRTSDKPHISANGRFIVFESYAADLIPIGGTVTNDIYLWDAASDSIELISIASDGLKS 93

Query: 211 DQILFEPRFSPNQQKVAYAT---------YDDEDILRVYLMDTRIDRAPKRIG------- 254
           D   + P  S +   +A+ +          D    + V++ D RI    KRI        
Sbjct: 94  DGHSYAPTVSNDGNYIAFESRGTTLDVDNIDANGRIDVFVRD-RIKSETKRITYTENGES 152

Query: 255 NFRSMILAPRFSSNGKRALISVQ----------KDEAMDIYSVDLQSNATE--------- 295
           N+ S    P  S NGK    + +               D+Y   L++   E         
Sbjct: 153 NYDSNN--PVISGNGKYVAFTSRATNLLNSTDVNGTYADVYRYSLENKTLELASVSSMGF 210

Query: 296 RLTNTLFINISASYSPDSSQIVFES-------DREGKEQLYVMQSNGS-------DQKRI 341
           + TN      S + S D + + F S       D++G+  +YV   N S           +
Sbjct: 211 QDTNDASY--SPNISDDGNIVAFISDAELDGRDQDGRADVYVRNMNESLTEMASVTSTGL 268

Query: 342 SQDKEASY-FDPVWSPQGDLIAFTKFSG----------EKFAIGVMKKDGSQERLLVEDS 390
           + +    Y F    S  G   +F                +              L  +  
Sbjct: 269 NDNGRVEYSFRIGLSSDGTTTSFIYDDDYGTFDSYNVYNEDNAYTHDLTSGITTLASKHK 328

Query: 391 NLQAPTW--------SPSGRSLIFSRKK------DGDTGSKLYSIDLNGRNETLINTP 434
           +  A  +        S  G+ + F  +       D D    +Y   ++  + T ++ P
Sbjct: 329 DEDAERYYVSQAVDLSGDGKFVAFHSQGQTFDLLDRDNADDVYFYSMDDDSLTTLSKP 386



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 25/130 (19%)

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQD-------KEASYFDPVWSPQGDLIAFTKFSGEKF 371
            ++ +G+  +Y   +   D   +S+           +   P  S  G  I F  ++ +  
Sbjct: 2   SAESQGRCDIYRKNTETGDIDLVSKHHPDVEAFSNRTSDKPHISANGRFIVFESYAADLI 61

Query: 372 --------AIGVMKKDGSQERL-------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
                    I +         L       L  D +  APT S  G  + F  +    T  
Sbjct: 62  PIGGTVTNDIYLWDAASDSIELISIASDGLKSDGHSYAPTVSNDGNYIAFESR---GTTL 118

Query: 417 KLYSIDLNGR 426
            + +ID NGR
Sbjct: 119 DVDNIDANGR 128


>gi|251798813|ref|YP_003013544.1| hypothetical protein Pjdr2_4846 [Paenibacillus sp. JDR-2]
 gi|247546439|gb|ACT03458.1| hypothetical protein Pjdr2_4846 [Paenibacillus sp. JDR-2]
          Length = 443

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 73/223 (32%), Gaps = 32/223 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +    + +A  +   E     YL+D    +    + +  +  L    S +G +A  S +
Sbjct: 135 TWVNASKLIA--SISGESGREDYLVDAATGKNELLLTSSDTSELI--VSPDGSKAAYS-E 189

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D    +  +DL +  + +++    I     +S D S I F    +    +  +      
Sbjct: 190 EDGT--VNVIDLSTKQSTKVSTDTSIKNEMVFSADGSSIFFF-QGDKNSVICKLSLADGS 246

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAF------------------------TKFSGEKFAI 373
             ++ +DK     +   S  G  +A+                        T    + F  
Sbjct: 247 VTKVLEDKVDYKANLSVSADGSKVAYFQIKQPVVKNDATDVSKDDVTIDPTGTETQAFFY 306

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
              K D    +L  + S+      S  G  + +    D +TG+
Sbjct: 307 DSAKGDNKPVQLTKDASDKAFLELSADGSKVYYVSINDDNTGN 349



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 11/126 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++   S  I   S   G+E   V  + G ++  ++    +   + + SP G   A+++  
Sbjct: 135 TWVNASKLIASISGESGREDYLVDAATGKNELLLT---SSDTSELIVSPDGSKAAYSEED 191

Query: 368 GEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NG 425
           G    + V+     Q   +  + S      +S  G S+ F     GD  S +  + L +G
Sbjct: 192 GT---VNVIDLSTKQSTKVSTDTSIKNEMVFSADGSSIFFF---QGDKNSVICKLSLADG 245

Query: 426 RNETLI 431
               ++
Sbjct: 246 SVTKVL 251


>gi|119491237|ref|ZP_01623334.1| Serine/Threonine protein kinase with WD40 repeats [Lyngbya sp. PCC
           8106]
 gi|119453578|gb|EAW34739.1| Serine/Threonine protein kinase with WD40 repeats [Lyngbya sp. PCC
           8106]
          Length = 662

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 76/242 (31%), Gaps = 23/242 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N          ++     SP+ Q +    +D +    + +   +  +  + +    + I
Sbjct: 371 WNAVLTLTGHSDVVNVIAISPDGQFIVSGGWDHK----IKIWSVQSGQLIRNLKGHSNSI 426

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE 319
            A   + +G++  IS   D  + I+S   ++            ++SA + SP++    F 
Sbjct: 427 TALAMTPDGQQI-ISGSVDSTIKIWS--AKTGQLLETLQGHSYSVSALAVSPNAQ---FI 480

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                   + +      + ++       S          +LI           I +    
Sbjct: 481 VSGSWDNTIKIWSLATGELQKTLTGHTNSVNAITVDTDSELIYSGSVDNS---INIWSLK 537

Query: 380 GSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYA 437
             +     E     +    S   R +I       D   +++S+  +G    LI T P + 
Sbjct: 538 TGKVEHTFEPFQTYKTVVISSDSRFVI---SGSWDNTIEIWSLK-DG---QLIQTLPGHD 590

Query: 438 SD 439
            D
Sbjct: 591 HD 592



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 70/218 (32%), Gaps = 15/218 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG + +++ +       +          +     SPN Q +   ++D+     + +    
Sbjct: 440 SGSVDSTIKIWSAKTGQLLETLQGHSYSVSALAVSPNAQFIVSGSWDN----TIKIWSLA 495

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                K +    + + A    ++    + S   D +++I+S  L++   E  T   F   
Sbjct: 496 TGELQKTLTGHTNSVNAITVDTD-SELIYSGSVDNSINIWS--LKTGKVEH-TFEPFQTY 551

Query: 306 SAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
                S DS    F         + +         +     +    D   SP    IA +
Sbjct: 552 KTVVISSDSR---FVISGSWDNTIEIWSLKDGQLIQTLPGHDHDLLDLAVSPDSKFIA-S 607

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSG 401
             S +   I  ++  G   R L    N +   T+S  G
Sbjct: 608 GSSDQTIKIWSLET-GYLLRTLTGHFNSVNTLTFSSDG 644


>gi|224371927|ref|YP_002606093.1| putative dipeptidyl anminopeptidase [Desulfobacterium autotrophicum
           HRM2]
 gi|223694646|gb|ACN17929.1| putative dipeptidyl anminopeptidase [Desulfobacterium autotrophicum
           HRM2]
          Length = 638

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 67/173 (38%), Gaps = 20/173 (11%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +G         +  M+++   +     +R+T +   +++  +  ++++I F  DR G
Sbjct: 49  LSPDGTSLAFMKPWENRMNVFIKKIGQIGEKRVTRSTARDVAGFFWANNNRIAFLQDRGG 108

Query: 325 KE--QLYVMQSNGSDQKRISQDKEASYF---DPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            E   L+ +  +GS+ K ++  ++       D        LI   +     F +  +  D
Sbjct: 109 NENFHLFAVDIDGSNLKELTPFEDVRVNIVDDLEEIKDEMLIGMNRRDPRVFDVYRINID 168

Query: 380 GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             +  ++ E   N+Q            +    DG       ++  +G N++L+
Sbjct: 169 TGRMEMIAENPGNIQG-----------WLTDNDGRLR---IAMATDGVNQSLL 207



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 39/93 (41%), Gaps = 3/93 (3%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSP 399
           S  K         SP G  +AF K    +  + + K     E+ +   +  ++    W+ 
Sbjct: 37  SFFKNPEQTGFQLSPDGTSLAFMKPWENRMNVFIKKIGQIGEKRVTRSTARDVAGFFWAN 96

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + R + F + + G+    L+++D++G N   + 
Sbjct: 97  NNR-IAFLQDRGGNENFHLFAVDIDGSNLKELT 128


>gi|115372300|ref|ZP_01459610.1| peptidase [Stigmatella aurantiaca DW4/3-1]
 gi|115370765|gb|EAU69690.1| peptidase [Stigmatella aurantiaca DW4/3-1]
          Length = 743

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/301 (12%), Positives = 98/301 (32%), Gaps = 62/301 (20%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMD-------- 243
            V+  DG      +   +     P   +SP+ + +     D   + ++ ++D        
Sbjct: 184 AVLGSDGRTRIERSGEENHGWQIPEKAWSPDNRFLVVWRNDLRGVHKIPIVDYSSALERV 243

Query: 244 --TRIDRAPKRIGNFRSMILAPR--------------------FSS-NGKRALISVQKDE 280
                 +    +G     ++ P                     +   +G+  ++ + +D 
Sbjct: 244 TLVPYVKTGTPLGRAEFSVVEPATGRVTRIPPMEEETYDWFAGWRPGSGEALILHLSRDG 303

Query: 281 -AMDIYSVDLQSNATERL----------------TNTLFINISASYSPDSSQIVFESDRE 323
             +D+ +V+  S    ++                T      ++    PD +  ++ S+R+
Sbjct: 304 KRLDLSAVEPVSGKRRQVLREERPESFVAGLDFATEGWARQVTPL--PDDTGFLWMSERD 361

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----KFAIGVMKKD 379
           G   +Y+    G   +++++     +     +P+GD +     +      +  +      
Sbjct: 362 GWRHVYLYDFAGKLVRQLTRGAFPIHQVAGVAPKGDALFLLASADSTAPYEHLLYRGSLK 421

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSL--IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           G   + +   S +    +SPSG      +S +           +  +G+    + T A A
Sbjct: 422 GGALKRMSSGSGMHRIAFSPSGGYYVDAWSSRTQARLRD---MVSTDGKTRFRL-TAADA 477

Query: 438 S 438
           S
Sbjct: 478 S 478



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 76/236 (32%), Gaps = 39/236 (16%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK- 278
           +PN Q +A      +    V   D R         N    I    +S + +  ++     
Sbjct: 169 APNGQAIA---VQRDGGFAVLGSDGRTRIERSGEENHGWQIPEKAWSPDNRFLVVWRNDL 225

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                I  VD  S+A ER+T   ++                    G+ +  V++      
Sbjct: 226 RGVHKIPIVD-YSSALERVTLVPYVKTG--------------TPLGRAEFSVVEPATGRV 270

Query: 339 KRISQDKEASYFDPV-WSPQGD--LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            RI   +E +Y     W P     LI      G++  +  ++    + R ++ +   ++ 
Sbjct: 271 TRIPPMEEETYDWFAGWRPGSGEALILHLSRDGKRLDLSAVEPVSGKRRQVLREERPESF 330

Query: 396 T---------WS------PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                     W+      P     ++  ++DG     +Y  D  G+    +   A+
Sbjct: 331 VAGLDFATEGWARQVTPLPDDTGFLWMSERDG--WRHVYLYDFAGKLVRQLTRGAF 384


>gi|119872809|ref|YP_930816.1| peptidase S9 prolyl oligopeptidase [Pyrobaculum islandicum DSM
           4184]
 gi|119674217|gb|ABL88473.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Pyrobaculum islandicum DSM 4184]
          Length = 588

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 8/133 (6%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  +      I + SD  G  QL+        +  +    E    D   +  G ++  T
Sbjct: 31  TSPRFG-KGKAIYYLSDVTGSMQLWQFD---GTRHDVVVPWEGRVSDYRIANDGTIVIAT 86

Query: 365 KFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            F+G EK+ + ++  D      +  +       WSP  R L F+   D      LY  D 
Sbjct: 87  DFNGDEKWRLYIINDD--VVVPVSLEGVNYLGAWSPDSRKLAFTSTLDDGQNFNLYVYDR 144

Query: 424 NGRN-ETLINTPA 435
           +  +   L + P 
Sbjct: 145 DTNSVVKLADIPG 157



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 67/212 (31%), Gaps = 14/212 (6%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDIL 237
            V  +  +G  K  L +++ D      +  S + + +   +SP+ +K+A+ +  DD    
Sbjct: 82  IVIATDFNGDEKWRLYIINDD----VVVPVSLEGVNYLGAWSPDSRKLAFTSTLDDGQNF 137

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +Y+ D   +   K + +   + +   +S  G   +     +  +       +    + L
Sbjct: 138 NLYVYDRDTNSVVK-LADIPGINIVEEWSDVG---IFITHYETNLHSTIYWYRDGELKEL 193

Query: 298 TNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           T       + S  Y  +   +   +       +  +     + + + Q         VW 
Sbjct: 194 TKHSGETWSHSPKYLGNGKLLYLTNADWEYVGIAQIDLTTGNWRYVIQLDRDVELFDVW- 252

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                + FT        +  M         + 
Sbjct: 253 --RSYLVFTLNEEGSSGLYYMHMPSGLTHKIT 282



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 68/186 (36%), Gaps = 10/186 (5%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
             RDG        S +     P++  N  K+ Y T  D + + +  +D         I  
Sbjct: 184 WYRDGELKELTKHSGETWSHSPKYLGNG-KLLYLTNADWEYVGIAQIDLTTGNWRYVIQL 242

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            R + L   +       + ++ ++ +  +Y + + S  T ++T    +  S  Y     +
Sbjct: 243 DRDVELFDVWR---SYLVFTLNEEGSSGLYYMHMPSGLTHKITIPRGVITSLQYRE--EK 297

Query: 316 IVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++F  S      ++Y+ Q      ++I+   +         P+ + + +T   G K    
Sbjct: 298 LLFSLSSVNRGHEVYLYQ--SGVVRQITDSPKFGLALDKI-PEPESVWYTSHDGRKIQAN 354

Query: 375 VMKKDG 380
           + +  G
Sbjct: 355 IYRPPG 360


>gi|325923114|ref|ZP_08184807.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas gardneri ATCC 19865]
 gi|325546429|gb|EGD17590.1| periplasmic component of the Tol biopolymer transport system
           [Xanthomonas gardneri ATCC 19865]
          Length = 293

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 24/170 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGS---DQKRISQDKEASYFDP 352
           +T      A+ SPD  +IV+ SDR    G   L+  Q +G    + + +  +       P
Sbjct: 35  STPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLSGGRWQNAQPLPINTAQDETSP 94

Query: 353 VWSPQGDLIAFTKFS---GEKFAIGV--MKKDGSQ------ERLLVEDSNLQAPTWSPSG 401
           ++S  G  + F            +    +   G          ++    N ++PT S  G
Sbjct: 95  LFSADGRWLLFASTRLGGAGGADLYRAPVDAQGGIGAVQSLGAVVNSRGNERSPTLSLDG 154

Query: 402 RSLIFSRK-KDGDTGSKLYSIDLNG------RNETLINTPAYASDPQWVG 444
             L+F+   + G  G  ++    +G         + IN+ A   D  W+G
Sbjct: 155 TRLLFASDGRGGAGGMDVFVARWDGQAFVAPAPLSAINSAADELDATWLG 204



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 59/191 (30%), Gaps = 25/191 (13%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATER----LTNTLFINI 305
           + +  +       S +G+R + +  +       D++   L     +       NT     
Sbjct: 33  VVSTPANEARATLSPDGQRIVWASDRAGGAGGWDLWQAQLSGGRWQNAQPLPINTAQDET 92

Query: 306 SASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSP 356
           S  +S D   ++F S R    G   LY    +        Q      +   +   P  S 
Sbjct: 93  SPLFSADGRWLLFASTRLGGAGGADLYRAPVDAQGGIGAVQSLGAVVNSRGNERSPTLSL 152

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLIFS 407
            G  + F    +       + V + DG         S + +       TW   GR L+++
Sbjct: 153 DGTRLLFASDGRGGAGGMDVFVARWDGQAFVAPAPLSAINSAADELDATWLGDGRGLVWA 212

Query: 408 RKKDGDTGSKL 418
           R +       L
Sbjct: 213 RGQTDGPSQLL 223



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 22/173 (12%)

Query: 220 SPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP+ Q++ +A+         D+ +  L   R   A     N      +P FS++G+  L 
Sbjct: 46  SPDGQRIVWASDRAGGAGGWDLWQAQLSGGRWQNAQPLPINTAQDETSPLFSADGRWLLF 105

Query: 275 SVQK---DEAMDIYS--VDLQSN-----ATERLTNTLFINISASYSPDSSQIVFESD--- 321
           +  +       D+Y   VD Q       +   + N+     S + S D ++++F SD   
Sbjct: 106 ASTRLGGAGGADLYRAPVDAQGGIGAVQSLGAVVNSRGNERSPTLSLDGTRLLFASDGRG 165

Query: 322 REGKEQLYVMQSNG----SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             G   ++V + +G    +     + +  A   D  W   G  + + +   + 
Sbjct: 166 GAGGMDVFVARWDGQAFVAPAPLSAINSAADELDATWLGDGRGLVWARGQTDG 218



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 49/165 (29%), Gaps = 19/165 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +     G     L      G    N + L  +  Q    P FS + + + +A+       
Sbjct: 55  ASDRAGGAGGWDLWQAQLSGGRWQNAQPLPINTAQDETSPLFSADGRWLLFASTRLGGAG 114

Query: 238 RVYLMDTRIDRAPKR--------IGNFRSMILAPRFSSNGKRALISVQKDEAM---DIYS 286
              L    +D             + N R    +P  S +G R L +          D++ 
Sbjct: 115 GADLYRAPVDAQGGIGAVQSLGAVVNSRGNERSPTLSLDGTRLLFASDGRGGAGGMDVFV 174

Query: 287 VDLQSN---ATERLT--NTLFINISASYSPDSSQIVFESDREGKE 326
                    A   L+  N+    + A++  D   +V+   +    
Sbjct: 175 ARWDGQAFVAPAPLSAINSAADELDATWLGDGRGLVWARGQTDGP 219


>gi|269126158|ref|YP_003299528.1| serine/threonine protein kinase with WD40 repeats [Thermomonospora
           curvata DSM 43183]
 gi|268311116|gb|ACY97490.1| serine/threonine protein kinase with WD40 repeats [Thermomonospora
           curvata DSM 43183]
          Length = 642

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 69/207 (33%), Gaps = 21/207 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A       +     L +    RA     +  + I A  FS +G+    +   
Sbjct: 368 FSPDGRLLA----TGGEGDAALLWEVGTRRAVAAFEDHPAGIRAVAFSPDGRLLA-TGGD 422

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           DE + ++SV         L        + ++SPD +++       G   + V        
Sbjct: 423 DEVVRLWSV-TAHRLVTVLKGHAGGVSALAFSPDGARLAVG---GGNRAVKVWNLAALRT 478

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--- 395
               +          +SP G  +A    +       V+  D +  R + E      P   
Sbjct: 479 VAAPKAPAGGVCALAFSPDGARLAAAVRNER-----VLLWDAAAFRTVTELRGHSGPVRS 533

Query: 396 -TWSPSGRSLIFSRKKDGDTGSKLYSI 421
             + P G +L        D  ++L+ +
Sbjct: 534 VAFRPDGTTLA---TGGEDGTARLWDL 557



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/277 (15%), Positives = 83/277 (29%), Gaps = 35/277 (12%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           LW+V  R+ +    F   PA  R +A   S D              R+L       +G  
Sbjct: 386 LWEVGTRRAVAA--FEDHPAGIRAVA--FSPD-------------GRLL------ATGGD 422

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              + +       +  +       +    FSP+  ++A           V + +    R 
Sbjct: 423 DEVVRLWSVTAHRLVTVLKGHAGGVSALAFSPDGARLAV----GGGNRAVKVWNLAALRT 478

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
                     + A  FS +G R   +V ++E + ++           L        S ++
Sbjct: 479 VAAPKAPAGGVCALAFSPDGARLAAAV-RNERVLLWDA-AAFRTVTELRGHSGPVRSVAF 536

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            PD + +      +G  +L+             +          +   G  +A T     
Sbjct: 537 RPDGTTLA-TGGEDGTARLW--DLATRYTIAPLKGHAGPVRSVAFRSDGATLA-TGGDDG 592

Query: 370 KFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
              +     +G+    L      ++A  + P G +L 
Sbjct: 593 TARLW-DGANGAPTATLTGHAGPVRAVAFGPEGMTLA 628



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 67/217 (30%), Gaps = 19/217 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A       D   V L      R    +      + A  FS +G R  +   
Sbjct: 409 AFSPDGRLLA----TGGDDEVVRLWSVTAHRLVTVLKGHAGGVSALAFSPDGARLAV--- 461

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                 +   +L +  T          + A ++SPD +++         E++ +  +   
Sbjct: 462 GGGNRAVKVWNLAALRTVAAPKAPAGGVCALAFSPDGARLAAAVR---NERVLLWDAAAF 518

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                 +          + P G  +A T        +  +    +   L      +++  
Sbjct: 519 RTVTELRGHSGPVRSVAFRPDGTTLA-TGGEDGTARLWDLATRYTIAPLKGHAGPVRSVA 577

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +   G +L        D  ++L+    +G N     T
Sbjct: 578 FRSDGATLA---TGGDDGTARLW----DGANGAPTAT 607



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 51/150 (34%), Gaps = 14/150 (9%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +LA  FS +G+      + D A+ ++ V  +  A     +      + ++SPD   +   
Sbjct: 363 VLAAVFSPDGRLLATGGEGDAAL-LWEVGTR-RAVAAFEDHPAGIRAVAFSPDGRLLATG 420

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            D    E + +          + +          +SP G  +A     G   A+ V    
Sbjct: 421 GD---DEVVRLWSVTAHRLVTVLKGHAGGVSALAFSPDGARLAV---GGGNRAVKVWNL- 473

Query: 380 GSQERLLVED----SNLQAPTWSPSGRSLI 405
            +  R +         + A  +SP G  L 
Sbjct: 474 -AALRTVAAPKAPAGGVCALAFSPDGARLA 502


>gi|55980835|ref|YP_144132.1| hypothetical protein TTHA0866 [Thermus thermophilus HB8]
 gi|55772248|dbj|BAD70689.1| hypothetical protein [Thermus thermophilus HB8]
          Length = 383

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 81/221 (36%), Gaps = 23/221 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  + +  FSP+ + +A A+ D    +R+Y       R  + +G   +  L   F 
Sbjct: 141 LKGHASYVRDLAFSPDGRYLASASGD--GTVRLYEAQ---GRFLRALGKGPAF-LKVGFD 194

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYSPDSSQIVFESDRE 323
           + G+  L  +Q    + ++  D  +        L+  LF   SA+ SP    +       
Sbjct: 195 AQGR--LFGLQLRGNLTLF--DPATGKVLAARPLSPYLF---SAAQSPGGRVLALGLSVG 247

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              ++ V       ++R  +      +   +SP G  +A     G    + ++   G + 
Sbjct: 248 ---RVEVWDLALPGKRREVRVPGGPVYALAFSPDGRYLAVGSADGGVRLLDLLAPGGPEP 304

Query: 384 RLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           RLL    +L     +SP GR L        D   +LY +D 
Sbjct: 305 RLLYAHKDLPLGLAFSPDGRYLA---SGGQDREVRLYDLDA 342



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/138 (12%), Positives = 47/138 (34%), Gaps = 9/138 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP  + +A        + RV + D  +    + +      + A  FS +G+   +     
Sbjct: 234 SPGGRVLALGL----SVGRVEVWDLALPGKRREVRVPGGPVYALAFSPDGRYLAVGSADG 289

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
               +  +         L     + +  ++SPD   +       G+++ + +   +    
Sbjct: 290 GVRLLDLLAPGGPEPRLLYAHKDLPLGLAFSPDGRYLA----SGGQDREVRLYDLDAGLL 345

Query: 339 KRISQDKEASYFDPVWSP 356
           +R+      + +   ++P
Sbjct: 346 ERVYVGHTGAVYGLDFNP 363



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 29/175 (16%)

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           +LR    L+D    K +               A  +S  ++ +     G    R+L +  
Sbjct: 203 QLRGNLTLFDPATGKVL--------------AARPLSPYLFSAAQSPGG----RVLALGL 244

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           SV        + V D      R         ++   FSP+ + +A  + D    +R+  +
Sbjct: 245 SVG------RVEVWDLALPGKRREVRVPGGPVYALAFSPDGRYLAVGSADGG--VRLLDL 296

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                  P+ +   + + L   FS +G+         +  ++   DL +   ER+
Sbjct: 297 LAPGGPEPRLLYAHKDLPLGLAFSPDGRYLA---SGGQDREVRLYDLDAGLLERV 348


>gi|296123881|ref|YP_003631659.1| serine/threonine protein kinase-related protein [Planctomyces
            limnophilus DSM 3776]
 gi|296016221|gb|ADG69460.1| Serine/threonine protein kinase-related protein [Planctomyces
            limnophilus DSM 3776]
          Length = 1655

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 48/272 (17%), Positives = 95/272 (34%), Gaps = 33/272 (12%)

Query: 189  IKNSLCVMD-RDGANIR--YLTPSRDQILFEPRFSPNQQKVA----YATYDDEDILRVYL 241
              N++ V D + G  IR  ++T            SP+   +A    +AT +     RVY+
Sbjct: 805  KDNTVRVWDAQSGKEIRRLWMTEGSHYGPMGIAISPDGTSLAASSGWATANGPSEPRVYV 864

Query: 242  MDTRIDRAPKRIGNFRSM----ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             +       +R+ +F       +    FS  G    ++      ++ +++  +     R+
Sbjct: 865  WNMETG---ERLHHFPLADNHCVRCVTFSPQGGVVKLARSGKGGINSWTLP-EGKELPRV 920

Query: 298  T---NTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                    +     S+SPD++ ++  +   G  ++   +++  +  +  Q         V
Sbjct: 921  VFQETPPGVEAPRMSFSPDANYLL-SAVWNGAGEIRAWKTDAGEIAKTFQGHTRPPTHVV 979

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL------VEDSNLQAPTWSPSGRSLIFS 407
             S  G L+         F I +     S+ +LL      + DS  +   +SP G S +  
Sbjct: 980  MSANGQLLLSCAPD---FTIRLWDWA-SERQLLCIGDDEILDSQPRCVAFSPDGSSFVVG 1035

Query: 408  RKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
               D      LY        E      A  +D
Sbjct: 1036 ---DDSGQVSLYDTRSGSILERFTGHAARVND 1064



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/380 (12%), Positives = 110/380 (28%), Gaps = 66/380 (17%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL-----------R 125
            +F ++  ++                  ++    ++ G+  ++                +
Sbjct: 624 GLFRVLDFNNVLNFPLGAYGG------RAIELNRVIEGKWSRDNDGGYLNFAFERQRWYQ 677

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAH-TISDDI------YQSITGEKGDFNSRIL 178
           V+ +L   K    + G +  +     R       +            +T  +G+     +
Sbjct: 678 VKLQLRGDKTTCFLDGAQVLTMADPHRLQGKVGFASWNAAVRFRNIRVTDPQGNLLWEGV 737

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
                 VS            D A         D + +   FS +  ++  A+  D+  +R
Sbjct: 738 -PDLPQVSPAAPIPATSKTVDPAAPVVTMQHIDPVRWV-AFSKDGSRIVSASNGDDHEIR 795

Query: 239 -------------VYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISV-----Q 277
                        V + D +  +  +R+         P     S +G     S       
Sbjct: 796 GGIRYHVAGKDNTVRVWDAQSGKEIRRLWMTEGSHYGPMGIAISPDGTSLAASSGWATAN 855

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSS--QIVFESDREGKEQL--Y 329
                 +Y  ++++   ERL +    +       ++SP     ++     R GK  +  +
Sbjct: 856 GPSEPRVYVWNMETG--ERLHHFPLADNHCVRCVTFSPQGGVVKLA----RSGKGGINSW 909

Query: 330 VMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            +       + + Q+       P   +SP  + +    ++G    I   K D  +     
Sbjct: 910 TLPEGKELPRVVFQETPPGVEAPRMSFSPDANYLLSAVWNGAG-EIRAWKTDAGEIAKTF 968

Query: 388 EDSNL--QAPTWSPSGRSLI 405
           +           S +G+ L+
Sbjct: 969 QGHTRPPTHVVMSANGQLLL 988



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 65/190 (34%), Gaps = 14/190 (7%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              +  F+    ++  +V +G     +     D   I        +       S N Q + 
Sbjct: 931  APRMSFSPDANYLLSAVWNGAG--EIRAWKTDAGEIAKTFQGHTRPPTHVVMSANGQLLL 988

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDI 284
                       + L D   +R    IG+   +   PR   FS +G   ++    D++  +
Sbjct: 989  SCA----PDFTIRLWDWASERQLLCIGDDEILDSQPRCVAFSPDGSSFVV---GDDSGQV 1041

Query: 285  YSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
               D +S +  ER T          +S D  ++V  SD +   +++ +  +    + +++
Sbjct: 1042 SLYDTRSGSILERFTGHAARVNDVGFSADGKRLVSGSD-DRTVRIWPLSDHPLSDRLMTE 1100

Query: 344  DKEASYFDPV 353
            +   S     
Sbjct: 1101 NVNPSAGSDH 1110


>gi|115455059|ref|NP_001051130.1| Os03g0725400 [Oryza sativa Japonica Group]
 gi|108710839|gb|ABF98634.1| Will die slowly protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|108710840|gb|ABF98635.1| Will die slowly protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549601|dbj|BAF13044.1| Os03g0725400 [Oryza sativa Japonica Group]
 gi|215740616|dbj|BAG97272.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215767221|dbj|BAG99449.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215767316|dbj|BAG99544.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 324

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 79/216 (36%), Gaps = 19/216 (8%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +R       + +   +FSP+ + +A A+ D   +LRV+          +  G+    
Sbjct: 8   GYALRATLAGHRRAVSAVKFSPDGRLLASASAD--KLLRVWSTSDLASPVAELAGHGEG- 64

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINIS----ASYSP 311
           +    FS +G+    S   D  + I+ +            RL  TL  + +     ++SP
Sbjct: 65  VSDLAFSPDGRLIA-SASDDRTVRIWDLGDGGGGGGGGEPRLMKTLSGHTNYAFCLAFSP 123

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             + +   S     E + V +       R+            ++  G +I    + G   
Sbjct: 124 HGNMLASGSF---DETVRVWEVRSGRCLRVLPAHSEPVTSVDFNRDGAMIVSGSYDG-LC 179

Query: 372 AIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
            I      G   + L++D +  +    +SP+G+ ++
Sbjct: 180 RIW-DSATGHCIKTLIDDESPPVSFAKFSPNGKFVL 214



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 82/255 (32%), Gaps = 27/255 (10%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           S      L V    D A+         + + +  FSP+ + +A A+ D    +R++ +  
Sbjct: 36  SASADKLLRVWSTSDLASPVAELAGHGEGVSDLAFSPDGRLIASASDD--RTVRIWDLGD 93

Query: 245 RID-------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                     R  K +    +      FS +G     S   DE + ++ V         L
Sbjct: 94  GGGGGGGGEPRLMKTLSGHTNYAFCLAFSPHGNMLA-SGSFDETVRVWEV-RSGRCLRVL 151

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S  ++ D + IV  S  +G  +++   + G   K +  D+        +SP 
Sbjct: 152 PAHSEPVTSVDFNRDGAMIVSGSY-DGLCRIWD-SATGHCIKTLIDDESPPVSFAKFSPN 209

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAP-TWS-PSGRSLIFSRKKDG 412
           G  +           + +      +          +    P  +S  +G+ ++      G
Sbjct: 210 GKFVLAATLDS---KLRLWNFSAGKFLKTYTGHVNTKYCIPAAFSITNGKYIV-----SG 261

Query: 413 DTGSKLYSIDLNGRN 427
                +Y  DL  R 
Sbjct: 262 SEDKCVYIWDLQSRK 276



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 25/90 (27%), Gaps = 3/90 (3%)

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            + G   +        +     +SP G L+A                      L      
Sbjct: 5   DNPGYALRATLAGHRRAVSAVKFSPDGRLLASASADKLLRVWSTSDLASPVAELAGHGEG 64

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +    +SP GR +  +     D   +++ +
Sbjct: 65  VSDLAFSPDGRLIASASD---DRTVRIWDL 91


>gi|294459450|gb|ADE75588.1| will die slowly [Antheraea pernyi]
          Length = 346

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 82/224 (36%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 47  YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKVWGACDGKFEKTISGHKMGI 102

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R ++S   D+ + ++ +       + L          +++P S+ IV  S
Sbjct: 103 SDVAWSSD-SRLIVSASDDKTLKVWELS-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 160

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 161 F---DESVRIWDVRTGKCLKTLPAHLDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTASG 215

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 216 QCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 256


>gi|296394169|ref|YP_003659053.1| peptidase S9 prolyl oligopeptidase active domain-containing protein
           [Segniliparus rotundus DSM 44985]
 gi|296181316|gb|ADG98222.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Segniliparus rotundus DSM 44985]
          Length = 685

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 83/246 (33%), Gaps = 22/246 (8%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           GD +  +         G  ++ L  +D      R L    +  L  P+ SP++ +VAY  
Sbjct: 228 GDGSFLVTGFVVPGERGSSRSVLAHVDVATGQTRVLLDDPEGDLVSPKISPDRTQVAYVR 287

Query: 231 YDDEDILR-----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                  R     ++L+  R  +  +    +     A  +S +G+   +   +     ++
Sbjct: 288 ESLASPQRAPRRTLHLLSLRDGKTRQLAPRWDLWPNAIAWSPDGEALFVGADEQGRAPLF 347

Query: 286 SVDL----QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            V L          R+T+  F     + + D S     S          + ++GS  +  
Sbjct: 348 RVVLDSAGDGAEPTRITSDDFAYSCIAPTQDGSVFALRSSFLRAPHPVRVAADGSVAELP 407

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--------EDSNLQ 393
           S   E +    +     + +     +GE+    ++   G+ +  LV           N  
Sbjct: 408 SPSPERALPGTL-----EELTTVLPTGERVRSWLVLPAGADKAPLVLWVHGGPLSSWNAW 462

Query: 394 APTWSP 399
           +  W+P
Sbjct: 463 SWRWNP 468



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 52/159 (32%), Gaps = 21/159 (13%)

Query: 297 LTNTLFINISASYSPDSSQIV--FE------SDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +T       SA  + D S +V  F       S R     L  +       + +  D E  
Sbjct: 214 ITGGGLRETSADLAGDGSFLVTGFVVPGERGSSRS---VLAHVDVATGQTRVLLDDPEGD 270

Query: 349 YFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPS 400
              P  SP    +A+ +          +  + ++     + R L    +L   A  WSP 
Sbjct: 271 LVSPKISPDRTQVAYVRESLASPQRAPRRTLHLLSLRDGKTRQLAPRWDLWPNAIAWSPD 330

Query: 401 GRSLIFSRKKDGDTGSKLYSID--LNGRNETLINTPAYA 437
           G +L     + G        +D   +G   T I +  +A
Sbjct: 331 GEALFVGADEQGRAPLFRVVLDSAGDGAEPTRITSDDFA 369



 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 65/193 (33%), Gaps = 26/193 (13%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            LVTG V+   +   R      DV   +    +     P           D +   I+ +
Sbjct: 232 FLVTGFVVPGERGSSRSVLAHVDVATGQT---RVLLDDPEG---------DLVSPKISPD 279

Query: 170 KGDFNSRILFVSESVVSGII--KNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           +    +++ +V ES+ S     + +L ++  RDG   R L P  D       +SP+ + +
Sbjct: 280 R----TQVAYVRESLASPQRAPRRTLHLLSLRDGK-TRQLAPRWDLWPNAIAWSPDGEAL 334

Query: 227 AYATYDDEDIL--RVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALISVQKDEAM 282
                +       RV L        P RI +  F    +AP    +G    +      A 
Sbjct: 335 FVGADEQGRAPLFRVVLDSAGDGAEPTRITSDDFAYSCIAPT--QDGSVFALRSSFLRAP 392

Query: 283 DIYSVDLQSNATE 295
               V    +  E
Sbjct: 393 HPVRVAADGSVAE 405


>gi|256822669|ref|YP_003146632.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Kangiella koreensis DSM 16069]
 gi|256796208|gb|ACV26864.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kangiella koreensis DSM 16069]
          Length = 703

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/267 (12%), Positives = 85/267 (31%), Gaps = 44/267 (16%)

Query: 220 SPNQQKVAYATYDDEDIL-------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           SPN   +A+                   L   +     +     +  I   +++ +    
Sbjct: 63  SPNGDYIAFTQSKPRTPYVDEDGTAWNQLFVMKKGGEARPFITGKVSIGGVQWAHDSSAI 122

Query: 273 LISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             + ++  D+   +Y + +    ++++ +        + S D S++VF +  +  + L  
Sbjct: 123 YYTSKRGEDKHNSLYKIPVDGGESQQVLSFETDIGGYTISHDGSKLVFLAKEKDPKHLEK 182

Query: 331 MQSNGSDQKRISQDKEASYFD------------------------PVWSPQGDLIAF--- 363
           +   G   K   +D + ++                            +SP  D +     
Sbjct: 183 LDKKGFKAKVYEEDIKMTHAWLYELASQEDSQKPEKLDIKDHVLSVAFSPVNDQLMIQTS 242

Query: 364 -TKFSGEKF---AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF--SRKKDGDTGSK 417
            T    + +   ++ V+  DG        +       WS  G+ + F  +   +  T   
Sbjct: 243 PTSLIDDIYMKKSLKVVDLDGDIVASFKTEGKQGKAVWSTDGQQIAFLGANDYNDPTNGA 302

Query: 418 LYSIDLNGRN--ETLINTPAYASDPQW 442
           LY  +++     + + N  ++  D  W
Sbjct: 303 LYIANVDDETVYKRVANLSSHVMDIAW 329



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 10/94 (10%)

Query: 348 SYFDPVWSPQGDLIAFTKF---------SGEKFA-IGVMKKDGSQERLLVEDSNLQAPTW 397
           S      SP GD IAFT+           G  +  + VMKK G     +    ++    W
Sbjct: 56  SVTSLDVSPNGDYIAFTQSKPRTPYVDEDGTAWNQLFVMKKGGEARPFITGKVSIGGVQW 115

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +    ++ ++ K+  D  + LY I ++G     +
Sbjct: 116 AHDSSAIYYTSKRGEDKHNSLYKIPVDGGESQQV 149



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 15/126 (11%)

Query: 305 ISASYSPDSSQIVFE--------SDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            S   SP+   I F          D +G    QL+VM+  G  +  I+   + S     W
Sbjct: 58  TSLDVSPNGDYIAFTQSKPRTPYVDEDGTAWNQLFVMKKGGEARPFIT--GKVSIGGVQW 115

Query: 355 SPQGDLIAFTKFSGEKFA--IGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +     I +T   GE     +  +  DG + +++L  ++++   T S  G  L+F  K+ 
Sbjct: 116 AHDSSAIYYTSKRGEDKHNSLYKIPVDGGESQQVLSFETDIGGYTISHDGSKLVFLAKEK 175

Query: 412 GDTGSK 417
                +
Sbjct: 176 DPKHLE 181



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 47/151 (31%), Gaps = 15/151 (9%)

Query: 259 MILAPRFSSNGKRALISVQKDEAM----------DIYSVDLQSNATERLTNTLFINISAS 308
            + +   S NG     +  K               ++ +  +                  
Sbjct: 56  SVTSLDVSPNGDYIAFTQSKPRTPYVDEDGTAWNQLFVM-KKGGEARPFITGKVSIGGVQ 114

Query: 309 YSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++ DSS I + S R  +    LY +  +G + +++    E        S  G  + F   
Sbjct: 115 WAHDSSAIYYTSKRGEDKHNSLYKIPVDGGESQQVLS-FETDIGGYTISHDGSKLVFLAK 173

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             +   +  + K G + ++  ED  +    W
Sbjct: 174 EKDPKHLEKLDKKGFKAKVYEEDIKMTH-AW 203



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 54/323 (16%), Positives = 107/323 (33%), Gaps = 67/323 (20%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           SI G +   +S  ++ +         NSL  +  DG   + +      I      S +  
Sbjct: 109 SIGGVQWAHDSSAIYYTSKRGEDK-HNSLYKIPVDGGESQQVLSFETDIGGY-TISHDGS 166

Query: 225 KVAYATYDD-----------EDILRVYLMDTRI-------------DRAPKRIGNFRSMI 260
           K+ +   +                +VY  D ++              + P+++ + +  +
Sbjct: 167 KLVFLAKEKDPKHLEKLDKKGFKAKVYEEDIKMTHAWLYELASQEDSQKPEKL-DIKDHV 225

Query: 261 LAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPDS 313
           L+  FS    + +I       +D       +  VDL  +       T      A +S D 
Sbjct: 226 LSVAFSPVNDQLMIQTSPTSLIDDIYMKKSLKVVDLDGDIVASF-KTEGKQGKAVWSTDG 284

Query: 314 SQIVFESDREGKE----QLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            QI F    +  +     LY+   +     KR++        D  W  QGD + + +  G
Sbjct: 285 QQIAFLGANDYNDPTNGALYIANVDDETVYKRVANLSSH-VMDIAW--QGDDVIYIEHQG 341

Query: 369 EKFAIG------------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            +  I             V+      +R L         + S +G   I++         
Sbjct: 342 VESRIVRAAIKRKIADRPVVDYGNGIQRRL---------SVSNNGD--IYAMTDTASHPR 390

Query: 417 KLYSIDLNGRNETLINTPAYASD 439
           ++Y+ +  G  E L N+ ++ +D
Sbjct: 391 EVYAFNAEG-FERLTNSNSWLAD 412


>gi|195377710|ref|XP_002047631.1| GJ13548 [Drosophila virilis]
 gi|194154789|gb|EDW69973.1| GJ13548 [Drosophila virilis]
          Length = 405

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 80/212 (37%), Gaps = 15/212 (7%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           M RD A  R+ T     I    RFSP+  ++A +  D      V L + +      R  +
Sbjct: 1   MFRDPALERHFTGHTGNITQL-RFSPDGHQIATSAMD----ATVILWNLKQAARCIRFAS 55

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             + +    +S  G     S  +D  + I+   ++  + E L ++  +  S  + P    
Sbjct: 56  HSAAVYGVSWSPKGNFIA-SCSQDRTVKIWEPKVRGVSGEFLAHSKPV-RSVDFDPTGQL 113

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAI 373
           ++  SD +   +L+ +    S ++ IS   + + +     +SP G LIA      +   I
Sbjct: 114 LLTASD-DKAVKLWRV----SRRQFISSFAQQNNWVRAAKFSPNGKLIASVS-DDKSLRI 167

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +           E +  +   W P G  + 
Sbjct: 168 YEVSTGECVRTFTEERAAPRQVAWHPWGNMVA 199



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 9/130 (6%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDP 352
               T          +SPD  QI   S  +    L+ ++      + I      A+ +  
Sbjct: 8   ERHFTGHTGNITQLRFSPDGHQIA-TSAMDATVILWNLKQA---ARCIRFASHSAAVYGV 63

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            WSP+G+ IA          I   K  G     L     +++  + P+G+ L+ +     
Sbjct: 64  SWSPKGNFIASCSQD-RTVKIWEPKVRGVSGEFLAHSKPVRSVDFDPTGQLLLTASD--- 119

Query: 413 DTGSKLYSID 422
           D   KL+ + 
Sbjct: 120 DKAVKLWRVS 129



 Score = 43.9 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 63/173 (36%), Gaps = 9/173 (5%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +        I   RFS +G +   +   D  + ++++   +    R  +        S+S
Sbjct: 9   RHFTGHTGNITQLRFSPDGHQIA-TSAMDATVILWNLKQAARCI-RFASHSAAVYGVSWS 66

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P  + I   S  +   +++  +  G   + ++  K        + P G L+  T    + 
Sbjct: 67  PKGNFIASCSQ-DRTVKIWEPKVRGVSGEFLAHSKP--VRSVDFDPTGQLLL-TASDDKA 122

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +  + +         +++ ++A  +SP+G+ +        D   ++Y +  
Sbjct: 123 VKLWRVSRRQFISSFAQQNNWVRAAKFSPNGKLIASVSD---DKSLRIYEVST 172


>gi|291571666|dbj|BAI93938.1| serine/threonine protein kinase with WD-40 repeats [Arthrospira
           platensis NIES-39]
          Length = 686

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 82/243 (33%), Gaps = 19/243 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG   N++ +                  +     SP+ + +A  + D+     V L
Sbjct: 416 QTLASGSHDNTVRLWSLQTFEHLSTLTGHGGAINSIAISPDGRVIASGSRDN----TVKL 471

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
            D    +    +      I    FS +GK    S  +D  + ++  DL++N     L   
Sbjct: 472 WDLHSKQEIATLKGHERDITTIAFSRDGKTLA-SGSRDHTITLW--DLETNELIGTLRGH 528

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                + ++SP+   I   S  +   +L+ +         +S DK  S     +S  G  
Sbjct: 529 NHEVRAVAFSPNGRLIASASQ-DNTVKLWDIDRREEISTLLSHDK--SVNAIAFSRDGQT 585

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +A          + +      +    +   +  +++   S  GR +        D   +L
Sbjct: 586 LA---SGSSDHTLKLWDVTTKEVIATLHGHSQAIKSLALSHDGRIIA---SGGDDDTVQL 639

Query: 419 YSI 421
           + +
Sbjct: 640 WDL 642



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 65/193 (33%), Gaps = 10/193 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG   +++ + D +   +       +  +    FSPN + +A A+ D+     V L
Sbjct: 500 KTLASGSRDHTITLWDLETNELIGTLRGHNHEVRAVAFSPNGRLIASASQDN----TVKL 555

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D         + +    + A  FS +G+    S   D  + ++ V  +        ++ 
Sbjct: 556 WDIDRREEISTLLSHDKSVNAIAFSRDGQTLA-SGSSDHTLKLWDVTTKEVIATLHGHSQ 614

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I  S + S D   I    D    + + +      +     +   +      +SP    +
Sbjct: 615 AIK-SLALSHDGRIIASGGD---DDTVQLWDLKTKEAIATLRGHSSKIEAIAFSP-KRPL 669

Query: 362 AFTKFSGEKFAIG 374
             +        I 
Sbjct: 670 LVSGSHNRNLEIW 682


>gi|320185541|gb|EFW60307.1| hypothetical protein YidR [Shigella flexneri CDC 796-83]
          Length = 356

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 206 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQISFLMRDDNGIVQL 265

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 266 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 321

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 322 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 355



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/117 (14%), Positives = 45/117 (38%), Gaps = 12/117 (10%)

Query: 267 SNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREG 324
             G +    ++ D   + ++ +  Q     +LT+    I  + ++ P    + F  D   
Sbjct: 247 PQGTQISFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD--- 303

Query: 325 KEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             ++    +   + + ++++     S    V+SP G  +A+     E   + + + D
Sbjct: 304 -NRIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAWM----EGGQLWITETD 355



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 16/95 (16%), Positives = 33/95 (34%), Gaps = 3/95 (3%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +S  +        L ++   G   R LT ++  I     + P+ + + +    D  I   
Sbjct: 252 ISFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACA 309

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +     ++   +   N  S   A  FS +G+    
Sbjct: 310 HAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW 343


>gi|256391284|ref|YP_003112848.1| WD40 domain-containing protein beta Propeller [Catenulispora
           acidiphila DSM 44928]
 gi|256357510|gb|ACU71007.1| WD40 domain protein beta Propeller [Catenulispora acidiphila DSM
           44928]
          Length = 714

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/288 (18%), Positives = 85/288 (29%), Gaps = 51/288 (17%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSR----DQILFEPRFSPNQQKVAYATYDDEDI 236
           + +V  G +     +   DG N   LT          +    FSP   + AY   D    
Sbjct: 30  ASAVNPGGVPARSPLAVADGTNQIALTGGGMLTAPTNVTSIAFSPKGDRYAYIAADS--- 86

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSN--- 292
             V+ ++                 L P +  +G     S +       +  V        
Sbjct: 87  -SVHTVNRDGSGDTLIAAATGVQRLHPTWGDDGYTVGWSELSGVGNSSVLRVTAADGSAV 145

Query: 293 ATERLTNTL------------FINISASYSPDSSQIVFESD----REGKEQLYVMQSNGS 336
              + T               + +I   +S     +VFE D      G   + +   + S
Sbjct: 146 GASQPTWAPTGYTTSTNPGTAYNDIQPEFS--GDLLVFERDIPNNGPGPRSILLRGYDAS 203

Query: 337 D---QKRI---SQDKEASYFDPVWSPQGDLIAF-----TKFSGEKFAIGVMK--KDG--S 381
               QK+I   +     S +DP  SP G  +AF             AI  +    DG   
Sbjct: 204 GNPFQKQIAGSTTTVAGSAWDPTISPDGRTVAFLQNATVSPGVSVPAIFAVDVAPDGTAG 263

Query: 382 QERLLVEDSNL-----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             R +           Q P +S  G+++ FS    G      Y++   
Sbjct: 264 TPRQITFPQTAGFVPPQHPAFSADGKTIAFSSS-PGAPQPGTYTVSAT 310



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 72/225 (32%), Gaps = 42/225 (18%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDS 313
              + + +  FS  G R            +++V+   +    +     +     ++  D 
Sbjct: 62  TAPTNVTSIAFSPKGDRYAYIAADS---SVHTVNRDGSGDTLIAAATGVQRLHPTWGDDG 118

Query: 314 SQIVFE--SDREGKEQLYVMQSNGS--DQKRISQ-----------DKEASYFDPVWSPQG 358
             + +   S       L V  ++GS     + +                +   P +S  G
Sbjct: 119 YTVGWSELSGVGNSSVLRVTAADGSAVGASQPTWAPTGYTTSTNPGTAYNDIQPEFS--G 176

Query: 359 DLIAFTKFSGEK------FAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIF 406
           DL+ F +             +      G+  +            +   PT SP GR++ F
Sbjct: 177 DLLVFERDIPNNGPGPRSILLRGYDASGNPFQKQIAGSTTTVAGSAWDPTISPDGRTVAF 236

Query: 407 SRK---KDGDTGSKLYSIDL--NGRNETLINTPAYASDPQWVGFM 446
            +      G +   ++++D+  +G       TP   + PQ  GF+
Sbjct: 237 LQNATVSPGVSVPAIFAVDVAPDGT----AGTPRQITFPQTAGFV 277



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/245 (11%), Positives = 59/245 (24%), Gaps = 26/245 (10%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY- 228
            G  NS +L V+ +  S +  +        G       P       +P FS     + + 
Sbjct: 127 SGVGNSSVLRVTAADGSAVGASQ-PTWAPTGYTT-STNPGTAYNDIQPEFS--GDLLVFE 182

Query: 229 --ATYDDEDILRVYLMDTRIDRAPKR------IGNFRSMILAPRFSSNGKRALI-----S 275
                +      + L        P +                P  S +G+          
Sbjct: 183 RDIPNNGPGPRSILLRGYDASGNPFQKQIAGSTTTVAGSAWDPTISPDGRTVAFLQNATV 242

Query: 276 VQKDEAMDIYSVDLQ----SNATERLT----NTLFINISASYSPDSSQIVFESDREGKEQ 327
                   I++VD+     +    ++T             ++S D   I F S     + 
Sbjct: 243 SPGVSVPAIFAVDVAPDGTAGTPRQITFPQTAGFVPPQHPAFSADGKTIAFSSSPGAPQP 302

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                S       ++   +        +     + F      +       +         
Sbjct: 303 GTYTVSATVATPGVNPPTKVGDRWGSPTYDTASVGFVHRLAGRDRFDTADQASQSLWRNH 362

Query: 388 EDSNL 392
            D+N 
Sbjct: 363 GDAND 367


>gi|262194583|ref|YP_003265792.1| WD40 repeat, subgroup [Haliangium ochraceum DSM 14365]
 gi|262077930|gb|ACY13899.1| WD40 repeat, subgroup [Haliangium ochraceum DSM 14365]
          Length = 1280

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 58/349 (16%), Positives = 116/349 (33%), Gaps = 43/349 (12%)

Query: 107  GAQVLVT----GRVIKEGKDRLRVEFRLWDVKDRKQ---IIGKKFFSSP----ASWRKIA 155
            G   +      GR +  G+D   V   +WDV+  +Q   + G     +        R+  
Sbjct: 704  GVNAVALSGDGGRAVSGGEDGKVV---VWDVERGEQEATLSGHTKSVNAVVLSRDGRRAV 760

Query: 156  HTISDDIYQSITGEKG-------DFNSRILFVSESV-----VSGIIKNSLCVMDRDGANI 203
               SD   +    E+G         +  +L V+ S      VS     ++ V +     +
Sbjct: 761  SGSSDGTVKVWDVERGREEATLSGHDGWVLAVALSGDGRRAVSMSFDGTMKVWEVQRGQV 820

Query: 204  RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                  R+  +     S + ++             V + D    +   ++      + A 
Sbjct: 821  ETTLSVRNTWVKAVAISGDGRRAV----SGGSKGTVVVWDVERGQQEAKLSGPTGGVQAV 876

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             FS NG+R ++S  +D  + ++ V+ +      L+       + + S D  + V     +
Sbjct: 877  AFSGNGRR-VVSGSQDGTVRVWDVE-RGQQEATLSGHTDWVRAVALSGDGRRAV-SGGAD 933

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            GK  + V       Q+              +S  G   A +        +  +++ G QE
Sbjct: 934  GK--VVVWDVERGQQEATLSGHTDWVNAVAFSEDGRR-AVSGGDDGTVKVWKVER-GQQE 989

Query: 384  RLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             +  + +  L A   S  GR     R   G    K+   ++ G  + + 
Sbjct: 990  AVPSDSTELLSAVALSGDGR-----RAVSGSKEGKVLVREVEGGTQAVT 1033



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 5/106 (4%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
              VSG     + V D +G             +     S + ++  +   D +    V + 
Sbjct: 1136 RAVSGGYDGKVVVWDVEGGQEEAKLSGHIGRVLAVALSGDGRRAVWGGEDGK----VVVW 1191

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            D    +    +    S + A   S +G+R  +S   D  + ++ VD
Sbjct: 1192 DVERGQEEATLSGHTSAVKAVVLSGDGRR-AVSGSWDGTVKVWDVD 1236



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 50/339 (14%), Positives = 98/339 (28%), Gaps = 60/339 (17%)

Query: 115  RVIKEGKDRLRVEFRLWDVKDRKQ---IIGKKFFSSP----ASWRKIAHTISDDIYQSIT 167
             V      ++ V    WDV+  +Q   + G   + +        R+      D   +   
Sbjct: 927  AVSGGADGKVVV----WDVERGQQEATLSGHTDWVNAVAFSEDGRRAVSGGDDGTVKVWK 982

Query: 168  GEKG-------DFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
             E+G       D    +  V+ S      VSG  +  + V + +G            I++
Sbjct: 983  VERGQQEAVPSDSTELLSAVALSGDGRRAVSGSKEGKVLVREVEGGTQAVTLSGHTDIVW 1042

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS--------- 266
                S + +   YA    +D   V   D    +          ++ A   S         
Sbjct: 1043 TVALSEDGR---YAVSGSKDG-NVVAWDVERGQQEATRSYDVGLVCAVALSGDGRRGVVG 1098

Query: 267  -SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
             ++GK  ++  +        +    +     +          + S D  + V        
Sbjct: 1099 GTDGK--VVVWEVRGGQQNVTFSGHTGWVRAV----------ALSGDGWRAV---SGGYD 1143

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             ++ V    G  ++               S  G    +    GE   + V   +  QE  
Sbjct: 1144 GKVVVWDVEGGQEEAKLSGHIGRVLAVALSGDGRRAVW---GGEDGKVVVWDVERGQEEA 1200

Query: 386  LV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +    S ++A   S  GR    +     D   K++ +D
Sbjct: 1201 TLSGHTSAVKAVVLSGDGRR---AVSGSWDGTVKVWDVD 1236


>gi|299140760|ref|ZP_07033898.1| dipeptidyl-peptidase IV [Prevotella oris C735]
 gi|298577726|gb|EFI49594.1| dipeptidyl-peptidase IV [Prevotella oris C735]
          Length = 734

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 61/193 (31%), Gaps = 32/193 (16%)

Query: 271 RALISVQKDEAMDIYSVDLQSNA--TERLTNT---LFINISASYSPDSSQI---VFESDR 322
             L +        I   D+       + +T        +  AS S D  QI    F++  
Sbjct: 11  MLLATSNVSADNKITLKDVTGKTFTPKYITGVDPIKGTDRYASISNDGRQIIEYAFKTGN 70

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVM 376
           + +    +  ++G   K++           + SP G  +     + + +         + 
Sbjct: 71  QTRVLFDIANTHGESIKQLD--------GYMLSPDGKRMLIQTNTHKIYRRSFTADYYIY 122

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS-----IDLNGRNETLI 431
                +   L      Q PTWSP G  + F R  +      LY      I  +G+   +I
Sbjct: 123 TIQSRKLEKLSTGGPQQIPTWSPDGNQIAFVRDNNIFLVKLLYDNAESQITKDGKFNEII 182

Query: 432 NTPAYASDPQWVG 444
           N       P WV 
Sbjct: 183 NGV-----PDWVY 190



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 17/115 (14%)

Query: 220 SPNQQKVAYATYDDEDILRV----YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ +++   T   +   R     Y + T   R  +++       + P +S +G +    
Sbjct: 95  SPDGKRMLIQTNTHKIYRRSFTADYYIYTIQSRKLEKLSTGGPQQI-PTWSPDGNQIAFV 153

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLF----INISASY-----SPDSSQIVFESD 321
             +D  + +  + L  NA  ++T        IN    +        +  + F +D
Sbjct: 154 --RDNNIFLVKL-LYDNAESQITKDGKFNEIINGVPDWVYEEEFSTNRSLCFTAD 205


>gi|327313395|ref|YP_004328832.1| peptidase, S9A/B/C family, catalytic domain-containing protein
           [Prevotella denticola F0289]
 gi|326944284|gb|AEA20169.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           denticola F0289]
          Length = 723

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 24/145 (16%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S D  Q+V  S R GK    +   +      +    +        S  G  +     +  
Sbjct: 48  SADGRQVVKFSFRTGKPTGVIFDLSDVKDGPLKFFDDY-----QISADGCRLLLQTNTNR 102

Query: 370 KFA------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +         + +    Q + L ++   Q P +SP GR + +  K      + +Y  D 
Sbjct: 103 IYRRSFTADFYLYEVKTKQLKKLSKEGAEQIPVFSPDGRQIAYVHK------NNIYITD- 155

Query: 424 NGRNETLINTPAYASD-----PQWV 443
            G N   +      +      P WV
Sbjct: 156 -GENVRQVTADGAFNKVINGLPDWV 179



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 62/178 (34%), Gaps = 36/178 (20%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----- 274
           S + ++V   ++       V    + +   P +  +   +      S++G R L+     
Sbjct: 48  SADGRQVVKFSFRTGKPTGVIFDLSDVKDGPLKFFDDYQI------SADGCRLLLQTNTN 101

Query: 275 -SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              ++    D Y  ++++   ++L+      I   +SPD  QI +      K  +Y+  +
Sbjct: 102 RIYRRSFTADFYLYEVKTKQLKKLSKEGAEQI-PVFSPDGRQIAYV----HKNNIYI--T 154

Query: 334 NGSDQKRISQDK-----------------EASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +G + ++++ D                          WS     +++ ++   K    
Sbjct: 155 DGENVRQVTADGAFNKVINGLPDWVNEEEFGFNNALAWSADSRTLSWIRYDESKVKTY 212



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 37/178 (20%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +      + S++G++ +    +         DL       L       ISA    D  ++
Sbjct: 39  KGTSEYAQVSADGRQVVKFSFRTGKPTGVIFDLSDVKDGPLKFFDDYQISA----DGCRL 94

Query: 317 VFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           + +++      R      Y+ +      K++S  KE +   PV+SP G  IA+   +   
Sbjct: 95  LLQTNTNRIYRRSFTADFYLYEVKTKQLKKLS--KEGAEQIPVFSPDGRQIAYVHKN--- 149

Query: 371 FAIGVMKKDGSQERLLVEDSNLQ-------------------APTWSPSGRSLIFSRK 409
             I +   DG   R +  D                       A  WS   R+L + R 
Sbjct: 150 -NIYI--TDGENVRQVTADGAFNKVINGLPDWVNEEEFGFNNALAWSADSRTLSWIRY 204



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 53/350 (15%), Positives = 96/350 (27%), Gaps = 97/350 (27%)

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           V F L DVKD        +  S    R +  T ++ IY+              F    V 
Sbjct: 67  VIFDLSDVKDGPLKFFDDYQISADGCRLLLQTNTNRIYRRSFTAD--------FYLYEVK 118

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +  +K                  S++     P FSP+ +++AY   ++     +Y+ D  
Sbjct: 119 TKQLKKL----------------SKEGAEQIPVFSPDGRQIAYVHKNN-----IYITDGE 157

Query: 246 IDRAPKRIGNFR---------------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             R     G F                    A  +S++ +        +  +  YS+ L 
Sbjct: 158 NVRQVTADGAFNKVINGLPDWVNEEEFGFNNALAWSADSRTLSWIRYDESKVKTYSLQLF 217

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL-YVMQSNGSDQKRIS------Q 343
                                  S   F        +  Y     G D  ++S       
Sbjct: 218 ---------------------KGSHPAFNKYETYPGEYSYKYPKAGEDNSQVSAWAYSLS 256

Query: 344 DKEASYFDPVWSPQG------------DLIAFT-KFSGEKFAIGVMKKDGSQERLL---- 386
           D     +D   +  G             +I +T     ++  +          RLL    
Sbjct: 257 DGSVRKYDLPLAADGYIPRIKTTADADRIILYTMNRHQDELNLYAANSKTGACRLLIRER 316

Query: 387 ----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
               V++  ++          ++    +DG     LY     G+    I+
Sbjct: 317 VPKYVKEEAMEGIRIMKD--YILLPSDRDGYM--HLYLYSKEGKLLRQID 362


>gi|56421970|ref|YP_149288.1| hypothetical protein GK3435 [Geobacillus kaustophilus HTA426]
 gi|56381812|dbj|BAD77720.1| hypothetical protein [Geobacillus kaustophilus HTA426]
          Length = 585

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 67/191 (35%), Gaps = 26/191 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +GK+A      DE   ++ +DL SN  +++     +     +S D   + +     
Sbjct: 316 TLSPDGKKAAYV---DENGHLFVIDLVSNTVQQIGEDDEVKTDLVWSSDGRSL-YCIYGS 371

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--------IGV 375
             E + V+  +     +I  DK     D   SP G  + +T  +  K          +  
Sbjct: 372 NNEAVAVVALDNGTITKIIDDKVKYKTDLRLSPDGTKLLYTVANEGKTNYTDDQRTDVDS 431

Query: 376 MKKDGSQERL--------------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +   G+  +L              L   S+ +  +   S   +++    D D       +
Sbjct: 432 IDTSGTDPQLILVDLSSPTKQPTPLTSSSDNKVDSAFLSNYDIVYVSATDDDMSPPSLKM 491

Query: 422 DLNGRNETLIN 432
             NG  +TL++
Sbjct: 492 IRNGVEQTLLD 502



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS 400
           +  +  +  D   SP G   A+   +G    + V+    +  + + ED  ++    WS  
Sbjct: 305 TALRSINEMDLTLSPDGKKAAYVDENG---HLFVIDLVSNTVQQIGEDDEVKTDLVWSSD 361

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           GRSL       G     +  + L+    T I
Sbjct: 362 GRSLYCIY---GSNNEAVAVVALDNGTITKI 389


>gi|254416225|ref|ZP_05029979.1| hypothetical protein MC7420_5061 [Microcoleus chthonoplastes PCC
           7420]
 gi|196176907|gb|EDX71917.1| hypothetical protein MC7420_5061 [Microcoleus chthonoplastes PCC
           7420]
          Length = 687

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 79/211 (37%), Gaps = 20/211 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A       D   + +      +    +    S + +  FS +G+R  IS  
Sbjct: 452 AFSPDGKWLA----CGNDDYTIKVWALETGQELYTLMGHSSSVKSIVFSRDGQRL-ISGS 506

Query: 278 KDEAMDIYSVDLQSNATERLT----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            D  + ++  +L+      L+    + L    + + SP+S  +V  SD    + + V   
Sbjct: 507 DDRTIKLW--NLEIGKEIPLSIQHSDWLGRVNAVAISPNSQILVSGSD---DKTIKVWDL 561

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNL 392
                       +A+    V+SP G +IA +  + +   +      G +   L  +  ++
Sbjct: 562 TTGQLMMTLSGHKAAVKSVVFSPDGKIIA-SGSADQTIKLW-YLGTGKEMSTLSGNFGSV 619

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +   S  G+ L+       D   +L+ +  
Sbjct: 620 NSLAMSRDGKVLV---SGSSDETVQLWQLST 647



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 11/161 (6%)

Query: 166 ITGEKGDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           ++ +  D+  R+  V+ S      VSG    ++ V D     +          +    FS
Sbjct: 524 LSIQHSDWLGRVNAVAISPNSQILVSGSDDKTIKVWDLTTGQLMMTLSGHKAAVKSVVFS 583

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + +A  + D      + L      +    +      + +   S +GK  L+S   DE
Sbjct: 584 PDGKIIASGSADQ----TIKLWYLGTGKEMSTLSGNFGSVNSLAMSRDGK-VLVSGSSDE 638

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            + ++ +       + L        S + SPD   +V  S 
Sbjct: 639 TVQLWQLS-TGKIIDILKGHNSAVYSVAISPDRKTVVSGSS 678


>gi|332662537|ref|YP_004445325.1| WD40-like beta Propeller containing protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332331351|gb|AEE48452.1| WD40-like beta Propeller containing protein [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 407

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 87/261 (33%), Gaps = 45/261 (17%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD--TRIDRAPKRIGNFRSMILAP 263
           +  ++D   FE  FS +  KV ++         +Y  D        PK      S    P
Sbjct: 132 VISTKDNSEFELTFSTDGLKVYFSRRPRGGKQMIYESDFEDGSWSTPKLAHFSSSRDETP 191

Query: 264 RFSSNGKRALISVQK---------DEAMDIYSV---DLQSNATERLTN-----------T 300
             + NG       ++         +  M+I+ +   D   +  + L              
Sbjct: 192 FITPNGDFFFFGSERPIPNQPNEGNFDMNIWMMEKTDKGWSEPKPLPEPINEVQVAGEEW 251

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVM-----QSNGSDQKRI---SQDKEASYFDP 352
              N +  ++ D++   F S + G + + +          S+ K I     D++   +  
Sbjct: 252 PSSNNNLFFTNDNNTFYFTSMKRGTKAINLYETKFNNKEFSEPKLIDGFFDDEKYWVYSA 311

Query: 353 VWSPQGDLIAFTKFSG----EKFAIGVMKKDGSQ-------ERLLVEDSNLQAPTWSPSG 401
           V SP G  + F  F          I V KK            +++       +P +S  G
Sbjct: 312 VISPDGKYLVFNSFGAPGGEGGEDIFVSKKTEKGWSKALSIGKIVNSKDEESSPRFSRDG 371

Query: 402 RSLIFSRKKD-GDTGSKLYSI 421
           +   FSR ++ G+     +SI
Sbjct: 372 KYFFFSRAENLGNYEYGEWSI 392


>gi|309319957|pdb|3MXX|A Chain A, Crystal Structure Of Wdr5 Mutant (S62a)
          Length = 315

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 16  YALKFTLAGHTKAVSSVKFSPNGEWLAASSADK----LIKIWGAYDGKFEKTISGHKLGI 71

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 72  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 128

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 129 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 183

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 225


>gi|182415917|ref|YP_001820983.1| 6-phosphogluconolactonase [Opitutus terrae PB90-1]
 gi|177843131|gb|ACB77383.1| 6-phosphogluconolactonase [Opitutus terrae PB90-1]
          Length = 351

 Score = 59.6 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/259 (11%), Positives = 78/259 (30%), Gaps = 22/259 (8%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            H   D   +++      +++ ++        G ++    ++   G+++     +     
Sbjct: 92  CHLAVDRTGRALLVAN--YHTGVVASLPINPDGSLRPPASIIHHTGSSVHLERQATAHAH 149

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PR---FSSNGK 270
                SP+ + V       + I    L       +P       +   + PR   F+ +G+
Sbjct: 150 CV-TLSPDNRFVFVCDLGLDKIFIYRLDPGSAQLSPAEPPFLPTPAGSGPRHLTFAPDGR 208

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL-------TNTLFINISA--SYSPDSSQIVFESD 321
            A +  +    +  Y  D                 +    N SA     P   + V+ S+
Sbjct: 209 HAFLVTELGGTLIAYRYDAAHGTLTATDQKSTLAPDYRGENTSAAVRVHPLG-RFVYASN 267

Query: 322 REGKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           R G + + V   + + ++     +         D   SP G  +       +   +  + 
Sbjct: 268 R-GPDNIAVFAFDEASERLALVELVPSGGQGPRDFALSPDGQWLVAAHQFSDVITVFRVD 326

Query: 378 KDGSQERLLVEDSNLQAPT 396
           +   +       + +  P 
Sbjct: 327 RSTGRLTPTPHRARVSTPV 345


>gi|298493177|ref|YP_003723354.1| WD40 domain-containing protein ['Nostoc azollae' 0708]
 gi|298235095|gb|ADI66231.1| WD40 repeat, subgroup ['Nostoc azollae' 0708]
          Length = 346

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 62/188 (32%), Gaps = 16/188 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S   + +A A+   E      ++                 I    FS +GK   I+ Q
Sbjct: 27  AWSSPGKTLAIASAAGE------VVLWEDGEITNLQTATGKSIDCVAFSPDGKYLAIAGQ 80

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + I+    ++     L N        +++  S+ + F   R     + V  +   +
Sbjct: 81  -DGKVKIWR---ENQLINTLENEPAWVDKLAWNHTSNLLAFSLGR----YVKVWDAETEE 132

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                  +++S     W   G  +A + + G    I        +  +L   +   A  W
Sbjct: 133 IVITLNFEKSSILGIDWRKDGHYLAISGYQG--VKIWDTNNWDEEPYILATTTVSVAMAW 190

Query: 398 SPSGRSLI 405
           SP G+ L 
Sbjct: 191 SPDGKYLA 198



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 56/168 (33%), Gaps = 16/168 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS----SNGKRAL 273
            +SP+ + +A    D     R   +    +  P  +  F   I    +S    S G   L
Sbjct: 189 AWSPDGKYLASGNMD-----RSVTVLEWENPDPWVMRGFPGKIRQLAWSEVTTSIGASLL 243

Query: 274 ISVQKDEAM-DIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            S   +  +    S D       R LTN + I    +Y+P S  +       G +    +
Sbjct: 244 ASSSVEGVVVWEKSADESLGWEARILTNHVDIINVIAYAPQSLILA----SAGADGWLCL 299

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            +   +  +I       +    W PQG L+A     GE   I     D
Sbjct: 300 WNQAYEVSQILTGVRGGFSTLAWHPQGKLLAAGGEQGELI-IWSTSTD 346


>gi|256419551|ref|YP_003120204.1| peptidase S9B dipeptidylpeptidase IV domain protein [Chitinophaga
           pinensis DSM 2588]
 gi|256034459|gb|ACU58003.1| peptidase S9B dipeptidylpeptidase IV domain protein [Chitinophaga
           pinensis DSM 2588]
          Length = 709

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 83/264 (31%), Gaps = 48/264 (18%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILR---------------------------VYL 241
            R        +SP+ + +AY  +DD  +                             V +
Sbjct: 174 GRASRYRAFWWSPDSRYIAYMRFDDSKVPVFPIYSEKGQHGYLENTRYPKAGDTNPAVKI 233

Query: 242 MDTRIDRAPKRIGNFRSMI----LAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNA--- 293
               +        +F         AP F+  G+  +  + +  + + IY +D  +     
Sbjct: 234 GTVAVGGGATLWSDFNENEDQYFGAPFFTPEGRLWVQWMNRGQDNLKIYEIDPATGKKKE 293

Query: 294 ---TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
               ++ T   + +    +   S   +  SD+ G   LY    +G+ +K+++   + ++ 
Sbjct: 294 IYDEKQKTWIDWYDAIP-FLAGSKGFILRSDKSGWAHLYWHNMDGTLKKQLT---DGNWT 349

Query: 351 DPVW-SPQGD--LIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                S      LI FT    +  +  +  +         L     +     SP+G   I
Sbjct: 350 VKDIRSIDNKQQLIYFTARKEASPRTDLYQVSLKTGVITRLTFGDYMHTVDVSPNGSYFI 409

Query: 406 FSRKKDGDTGSKLYSIDLNGRNET 429
            +   +  T  +   ++  G+   
Sbjct: 410 -TTYSNLATPPRTALLNNKGKVVR 432



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 96/312 (30%), Gaps = 72/312 (23%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R +F  E+        ++     D   I+Y T       ++   +   +   Y T  +  
Sbjct: 32  RQIFKGEATGLYQPLPNIKGWADDTHYIQYRTDGGASKAWKVE-AATGKSEPYVTPPEGA 90

Query: 236 ILRVY---LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            + V+   ++ T  +    ++ +  +    P  S +GK    +       D+Y++++ + 
Sbjct: 91  TVEVHNNDVIYTSPEGQQTQLTSDTAQERNPTLSPDGKFVAFT----RGNDLYAIEISTK 146

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              R T             D S +++         +Y  +  G   +         Y   
Sbjct: 147 KEIRYTT------------DGSDVIYN---GWASWVYYEEILGRASR---------YRAF 182

Query: 353 VWSPQGDLIAFTKFSGEK---FAIGVMKKD--------------------------GSQE 383
            WSP    IA+ +F   K   F I   K                            G   
Sbjct: 183 WWSPDSRYIAYMRFDDSKVPVFPIYSEKGQHGYLENTRYPKAGDTNPAVKIGTVAVGGGA 242

Query: 384 RLLVE-----DSNLQAPTWSPSGR-SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            L  +     D    AP ++P GR  + +  +  G    K+Y ID     +  I      
Sbjct: 243 TLWSDFNENEDQYFGAPFFTPEGRLWVQWMNR--GQDNLKIYEIDPATGKKKEIYDEKQK 300

Query: 438 SDPQW---VGFM 446
           +   W   + F+
Sbjct: 301 TWIDWYDAIPFL 312


>gi|126659736|ref|ZP_01730864.1| WD-repeat protein [Cyanothece sp. CCY0110]
 gi|126618984|gb|EAZ89725.1| WD-repeat protein [Cyanothece sp. CCY0110]
          Length = 1150

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 80/253 (31%), Gaps = 25/253 (9%)

Query: 173  FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYAT 230
            FN+    ++ S   G ++  L  +     N + +      D        S N +      
Sbjct: 800  FNNDDSVLASSGEDGTVR--LWSLKDKAHNAQSINLLNLGDTANVSVSLSANGK----VL 853

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKDEAMDIYSVDL 289
                      L D   ++    + N     L +  FS  G   +++  +D+   I+  +L
Sbjct: 854  GTAGRYTMAKLWDLEGNQLA--VLNGHGDNLRSIHFSPTGD-LVVTASRDKTAKIW--NL 908

Query: 290  QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            Q      L         A +SP+   I   S         +    G +   + +  +   
Sbjct: 909  QGQLIATLEEHQGDVRDARFSPNGQLIATAS---WDTTAKIWDVTGKELLTL-KGHQGVI 964

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
                +SP   L+A     G      V    G     L      + A  +SP G+ +  + 
Sbjct: 965  RKVSFSPDSQLLATASEDGTA---KVWNLQGKALVNLQGHQDGVLAVAFSPDGQIIATAS 1021

Query: 409  KKDGDTGSKLYSI 421
            K   D   KL+++
Sbjct: 1022 K---DKTVKLWNL 1031



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/251 (17%), Positives = 95/251 (37%), Gaps = 27/251 (10%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++++G    +  + D  G N           +    FS + Q +A A +D      V L
Sbjct: 723 QTLITGSKDKTARLWDLKG-NELATMQGHTDTVGSAVFSRDGQTIATAGFDQ----TVRL 777

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-----DLQSNATER 296
            + R  +  + +      +    F+++    L S  +D  + ++S+     + QS     
Sbjct: 778 WN-RQGKLLQTLQGHTDAVWGVNFNND-DSVLASSGEDGTVRLWSLKDKAHNAQSINLLN 835

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L +T   N+S S S +   +       G+  +  +     +Q  +      +     +SP
Sbjct: 836 LGDTA--NVSVSLSANGKVL----GTAGRYTMAKLWDLEGNQLAVLNGHGDNLRSIHFSP 889

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            GDL+           I      G     L E   +++   +SP+G+ +  +     DT 
Sbjct: 890 TGDLVVTASRDKTA-KIW--NLQGQLIATLEEHQGDVRDARFSPNGQLIATASW---DTT 943

Query: 416 SKLYSIDLNGR 426
           +K++  D+ G+
Sbjct: 944 AKIW--DVTGK 952



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 59/354 (16%), Positives = 121/354 (34%), Gaps = 61/354 (17%)

Query: 101  QDWN-----SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA 155
            QDW      SL  Q L+TG   K          RLWD+    ++   +            
Sbjct: 710  QDWVMYVNFSLDGQTLITGSKDKTA--------RLWDL-KGNELATMQ-----------G 749

Query: 156  HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
            HT  D +  ++    G          +++ +     ++ + +R G  ++ L       ++
Sbjct: 750  HT--DTVGSAVFSRDG----------QTIATAGFDQTVRLWNRQGKLLQTL-QGHTDAVW 796

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               F+ +   +A +  D    L          ++   +    +  ++   S+NGK     
Sbjct: 797  GVNFNNDDSVLASSGEDGTVRLWSLKDKAHNAQSINLLNLGDTANVSVSLSANGKVL--- 853

Query: 276  VQKDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                     Y++    DL+ N    L        S  +SP    +V  + R+   +++ +
Sbjct: 854  ----GTAGRYTMAKLWDLEGNQLAVLNGHGDNLRSIHFSPTGDLVV-TASRDKTAKIWNL 908

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDS 390
            Q          ++ +    D  +SP G LIA   +      I      G +   L     
Sbjct: 909  Q---GQLIATLEEHQGDVRDARFSPNGQLIATASWDTTA-KIW--DVTGKELLTLKGHQG 962

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKL---YSIDLNGRNETLINTPAYASDPQ 441
             ++  ++SP  + L  + +        L     ++L G  + ++   A++ D Q
Sbjct: 963  VIRKVSFSPDSQLLATASEDGTAKVWNLQGKALVNLQGHQDGVLAV-AFSPDGQ 1015



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 18/224 (8%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             R      + ++   ++SP+ Q +A A++D    L+++  D  +    K        + 
Sbjct: 536 RERNRLEGHEDVITRVKYSPDGQTLATASWD--KTLKIWQPDGTLLHTLK---GHSDAVW 590

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +  +S NG+  + S  +D+   I+ V         L           +S D   I     
Sbjct: 591 SVNYSPNGEYLV-SASRDKTAKIWRV-KDGQELTTLKVNQDWVACVGFSSDGQIIA---T 645

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 +Y+    G          +A       +PQ  ++A     G    I      G 
Sbjct: 646 MGWHGIIYLWNLQGELITSF-PTHKAPVVAIHVNPQTKMVATASRDGTA-KIW--NFQGQ 701

Query: 382 QERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +   L    +      +S  G++LI   K   D  ++L+ +  N
Sbjct: 702 ELATLRGHQDWVMYVNFSLDGQTLITGSK---DKTARLWDLKGN 742



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 69/184 (37%), Gaps = 13/184 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +     +  + D  G  +         ++ +  FSP+ Q +A A+ D     +V+ +   
Sbjct: 937  TASWDTTAKIWDVTGKEL-LTLKGHQGVIRKVSFSPDSQLLATASED--GTAKVWNLQ-- 991

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +A   +   +  +LA  FS +G+    +  KD+ + ++  +LQ    + L        
Sbjct: 992  -GKALVNLQGHQDGVLAVAFSPDGQIIA-TASKDKTVKLW--NLQGQELKTLQGHEQEVN 1047

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              S SP+   I   +  +G  +L+ +Q    +  +             ++P G  +  + 
Sbjct: 1048 DLSLSPNGYLIA-TASEDGTIKLWTLQ---GEVLQTLGGHRFGVKSISFTPDGKGLISSD 1103

Query: 366  FSGE 369
              G 
Sbjct: 1104 LMGN 1107



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 69/182 (37%), Gaps = 19/182 (10%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                 R   R+     +I   ++S +G+    +   D+ + I+  D        L    
Sbjct: 530 QSLYWIRERNRLEGHEDVITRVKYSPDGQTLA-TASWDKTLKIWQPD--GTLLHTLKGHS 586

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S +YSP+   +V  S R+   +++ ++ +G +   +  +++       +S  G +I
Sbjct: 587 DAVWSVNYSPNGEYLVSAS-RDKTAKIWRVK-DGQELTTLKVNQDW-VACVGFSSDGQII 643

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS----PSGRSLIFSRKKDGDTGSK 417
           A   + G    I +    G    L+      +AP  +    P  + +  + +   D  +K
Sbjct: 644 ATMGWHG---IIYLWNLQGE---LITSFPTHKAPVVAIHVNPQTKMVATASR---DGTAK 694

Query: 418 LY 419
           ++
Sbjct: 695 IW 696


>gi|257058842|ref|YP_003136730.1| hypothetical protein Cyan8802_0961 [Cyanothece sp. PCC 8802]
 gi|256589008|gb|ACU99894.1| WD-40 repeat protein [Cyanothece sp. PCC 8802]
          Length = 1279

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 95/243 (39%), Gaps = 35/243 (14%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----------- 234
            SG    S+ + D  G  +  ++P     +    FSPN Q +A AT + +           
Sbjct: 963  SGSEDGSIKLWDEKGQLVDSVSPEPQDKILAVSFSPNGQFLASATENAQIQIWRVNQQKL 1022

Query: 235  DILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
               ++        R  K I +      +    F+ +  + L+S  +D  + ++++D    
Sbjct: 1023 QPKQIISQGFGEMRFGKIIESEGHEGRVFDVEFTPD-NQFLVSAGEDGKIKLWTLD---- 1077

Query: 293  ATERLTNTLFINISASYSPDSSQ----IVFESDREGKEQLYVMQSNGSDQKRISQDKE-- 346
               RL NTL  +  + ++ D S+    I+  S   G++ L  +     D++  +  KE  
Sbjct: 1078 --RRLKNTLKGDRGSIFTLDFSRNKEGILLAS--GGEDNLIKLWKYNPDERNFTIYKELK 1133

Query: 347  ---ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGR 402
                +  D  +SP G LIA          I +  +DG     L E    ++  ++S  GR
Sbjct: 1134 GHLGNIRDVRFSPDGKLIASASDDQT---IKLWTRDGELLMTLKEHRLPVRQVSFSIDGR 1190

Query: 403  SLI 405
             L 
Sbjct: 1191 WLA 1193



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 79/233 (33%), Gaps = 34/233 (14%)

Query: 238  RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             + L D +           +  ILA  FS NG+    S  ++  + I+ V+ Q    +++
Sbjct: 969  SIKLWDEKGQLVDSVSPEPQDKILAVSFSPNGQFLA-SATENAQIQIWRVNQQKLQPKQI 1027

Query: 298  TN----------------TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +                         ++PD+  +V  +  +GK +L+ +     +    
Sbjct: 1028 ISQGFGEMRFGKIIESEGHEGRVFDVEFTPDNQFLV-SAGEDGKIKLWTLDRRLKNT--- 1083

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVED----SNLQAPT 396
             +    S F   +S   + I       +    +     D     +  E      N++   
Sbjct: 1084 LKGDRGSIFTLDFSRNKEGILLASGGEDNLIKLWKYNPDERNFTIYKELKGHLGNIRDVR 1143

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSIDLN-----GRNETLINTPAYASDPQWVG 444
            +SP G+ +  +     D   KL++ D         +   +   +++ D +W+ 
Sbjct: 1144 FSPDGKLIASASD---DQTIKLWTRDGELLMTLKEHRLPVRQVSFSIDGRWLA 1193



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 65/170 (38%), Gaps = 24/170 (14%)

Query: 264 RFSSNGKRAL--------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            FS +G+  +        + +++D  +            ER+     +  S + +PD   
Sbjct: 709 SFSPDGEWLVGGTNEGSVVLLKRDGTL---LSSPSQKHKERI---NALQFSPT-NPDDKM 761

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           ++  +  +   +L+ +  + S  +        +   +   +S  G L+A   +      I
Sbjct: 762 MLATASDDETIKLWNLDIDNSKLQLFHTLEGHKDRVWRIQFSHNGYLLASASYDNS---I 818

Query: 374 GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            + ++DGS    L      + + ++SP  ++L  +     D   KL+ +D
Sbjct: 819 KLWQRDGSLVNTLNGHQDLVNSLSFSPDNKTLASASY---DHTVKLWRLD 865



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 74/206 (35%), Gaps = 26/206 (12%)

Query: 125  RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL----FV 180
              + ++W V  +K    +         R         I +S   E   F+        F+
Sbjct: 1009 NAQIQIWRVNQQKLQPKQIISQGFGEMRFG------KIIESEGHEGRVFDVEFTPDNQFL 1062

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
              +   G IK  L  +DR    ++         +F   FS N++ +  A+  ++++++++
Sbjct: 1063 VSAGEDGKIK--LWTLDR---RLKNTLKGDRGSIFTLDFSRNKEGILLASGGEDNLIKLW 1117

Query: 241  LMDTRIDRAP--KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD---LQSNATE 295
              +         K +      I   RFS +GK    S   D+ + +++ D   L +    
Sbjct: 1118 KYNPDERNFTIYKELKGHLGNIRDVRFSPDGKLIA-SASDDQTIKLWTRDGELLMTLKEH 1176

Query: 296  RLTNTLFINISASYSPDSSQIVFESD 321
            RL          S+S D   +   SD
Sbjct: 1177 RL-----PVRQVSFSIDGRWLASGSD 1197


>gi|218245796|ref|YP_002371167.1| WD-40 repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|218166274|gb|ACK65011.1| WD-40 repeat protein [Cyanothece sp. PCC 8801]
          Length = 1279

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 52/243 (21%), Positives = 95/243 (39%), Gaps = 35/243 (14%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----------- 234
            SG    S+ + D  G  +  ++P     +    FSPN Q +A AT + +           
Sbjct: 963  SGSEDGSIKLWDEKGQLVDSVSPEPQDKILAVSFSPNGQFLASATENAQIQIWRVNQQKL 1022

Query: 235  DILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
               ++        R  K I +      +    F+ +  + L+S  +D  + ++++D    
Sbjct: 1023 QPKQIISQGFGEMRFGKIIESEGHEGRVFDVEFTPD-NQFLVSAGEDGKIKLWTLD---- 1077

Query: 293  ATERLTNTLFINISASYSPDSSQ----IVFESDREGKEQLYVMQSNGSDQKRISQDKE-- 346
               RL NTL  +  + ++ D S+    I+  S   G++ L  +     D++  +  KE  
Sbjct: 1078 --RRLKNTLKGDRGSIFTLDFSRNKEGILLAS--GGEDNLIKLWKYNPDERNFTIYKELK 1133

Query: 347  ---ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGR 402
                +  D  +SP G LIA          I +  +DG     L E    ++  ++S  GR
Sbjct: 1134 GHLGNIRDVRFSPDGKLIASASDDQT---IKLWTRDGELLMTLKEHRLPVRQVSFSIDGR 1190

Query: 403  SLI 405
             L 
Sbjct: 1191 WLA 1193



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 79/233 (33%), Gaps = 34/233 (14%)

Query: 238  RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             + L D +           +  ILA  FS NG+    S  ++  + I+ V+ Q    +++
Sbjct: 969  SIKLWDEKGQLVDSVSPEPQDKILAVSFSPNGQFLA-SATENAQIQIWRVNQQKLQPKQI 1027

Query: 298  TN----------------TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +                         ++PD+  +V  +  +GK +L+ +     +    
Sbjct: 1028 ISQGFGEMRFGKIIESEGHEGRVFDVEFTPDNQFLV-SAGEDGKIKLWTLDRRLKNT--- 1083

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVED----SNLQAPT 396
             +    S F   +S   + I       +    +     D     +  E      N++   
Sbjct: 1084 LKGDRGSIFTLDFSRNKEGILLASGGEDNLIKLWKYNPDERNFTIYKELKGHLGNIRDVR 1143

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSIDLN-----GRNETLINTPAYASDPQWVG 444
            +SP G+ +  +     D   KL++ D         +   +   +++ D +W+ 
Sbjct: 1144 FSPDGKLIASASD---DQTIKLWTRDGELLMTLKEHRLPVRQVSFSIDGRWLA 1193



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 65/170 (38%), Gaps = 24/170 (14%)

Query: 264 RFSSNGKRAL--------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            FS +G+  +        + +++D  +            ER+     +  S + +PD   
Sbjct: 709 SFSPDGEWLVGGTNEGSVVLLKRDGTL---LSSPSQKHKERI---NALQFSPT-NPDDKM 761

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           ++  +  +   +L+ +  + S  +        +   +   +S  G L+A   +      I
Sbjct: 762 MLATASDDETIKLWNLDIDNSKLQLFHTLEGHKDRVWRIQFSHNGYLLASASYDNS---I 818

Query: 374 GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            + ++DGS    L      + + ++SP  ++L  +     D   KL+ +D
Sbjct: 819 KLWQRDGSLVNTLNGHQDLVNSLSFSPDNKTLASASY---DHTVKLWRLD 865



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 74/206 (35%), Gaps = 26/206 (12%)

Query: 125  RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL----FV 180
              + ++W V  +K    +         R         I +S   E   F+        F+
Sbjct: 1009 NAQIQIWRVNQQKLQPKQIISQGFGEMRFG------KIIESEGHEGRVFDVEFTPDNQFL 1062

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
              +   G IK  L  +DR    ++         +F   FS N++ +  A+  ++++++++
Sbjct: 1063 VSAGEDGKIK--LWTLDR---RLKNTLKGDRGSIFTLDFSRNKEGILLASGGEDNLIKLW 1117

Query: 241  LMDTRIDRAP--KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD---LQSNATE 295
              +         K +      I   RFS +GK    S   D+ + +++ D   L +    
Sbjct: 1118 KYNPDERNFTIYKELKGHLGNIRDVRFSPDGKLIA-SASDDQTIKLWTRDGELLMTLKEH 1176

Query: 296  RLTNTLFINISASYSPDSSQIVFESD 321
            RL          S+S D   +   SD
Sbjct: 1177 RL-----PVRQVSFSIDGRWLASGSD 1197


>gi|254417270|ref|ZP_05031014.1| hypothetical protein MC7420_8194 [Microcoleus chthonoplastes PCC
           7420]
 gi|196175923|gb|EDX70943.1| hypothetical protein MC7420_8194 [Microcoleus chthonoplastes PCC
           7420]
          Length = 895

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/260 (18%), Positives = 91/260 (35%), Gaps = 35/260 (13%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D D +N  Y+       +    FS + Q +A A+ D      + + D +  R    +   
Sbjct: 607 DPDKSNRVYILQEAGDRIINLSFSSDSQTLASASADG----IIQVWDQKGQRQGT-VNVD 661

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQ 315
              I +  F+ N ++  IS  ++  +  Y  D  S    R       ++S   +S +  +
Sbjct: 662 ADKITSISFNPNRQQIAISTDQEIQLWQYLEDKLSQTLTR------PHVSHVRFSANGDK 715

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +    D+EG   L+  +               +  D  +SP   LIA +   G    + +
Sbjct: 716 LAAV-DQEGAIALWRCR--DGTLLHTFNTTNDAIIDIQFSPNSQLIASSSTEGT---VRL 769

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK--------KDGDTGSKL--------- 418
            +K+G+   +L     + + ++S   + L  +          ++G     L         
Sbjct: 770 WRKNGTLLNILQHTKPVTSFSFSADNQMLATTSTDNRVRLWHQNGTLLKALPSHKNPVAK 829

Query: 419 YSIDLNGRNETLINTPAYAS 438
            S  L+G    L N     S
Sbjct: 830 VSFSLDGEQLALANPDGTVS 849



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 74/213 (34%), Gaps = 14/213 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            +     P     + + +FSP+ Q +A A  D    L  +  D         +      I
Sbjct: 565 FSQPNTLPGHSSPVTQFQFSPDSQMLAVAYKDGTVKLWHHRSDPDKSNRVYILQEAGDRI 624

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVF 318
           +   FSS+ +    S   D  + ++          + T  +  +   S S++P+  QI  
Sbjct: 625 INLSFSSDSQTLA-SASADGIIQVW----DQKGQRQGTVNVDADKITSISFNPNRQQIAI 679

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +D+E   QL+    +   Q  +++          +S  GD +A     G   A+   + 
Sbjct: 680 STDQE--IQLWQYLEDKLSQT-LTRPH---VSHVRFSANGDKLAAVDQEG-AIALWRCRD 732

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                     +  +    +SP+ + +  S  + 
Sbjct: 733 GTLLHTFNTTNDAIIDIQFSPNSQLIASSSTEG 765



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 58/169 (34%), Gaps = 12/169 (7%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNATERL 297
           +         P  +    S +   +FS + +   ++  KD  + ++    D   +    +
Sbjct: 558 FNQAISSFSQPNTLPGHSSPVTQFQFSPDSQMLAVAY-KDGTVKLWHHRSDPDKSNRVYI 616

Query: 298 TNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                   I+ S+S DS  +   S       + V    G  Q  ++ D +       ++P
Sbjct: 617 LQEAGDRIINLSFSSDSQTLASAS---ADGIIQVWDQKGQRQGTVNVDAD-KITSISFNP 672

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
               IA +  + ++  +    +D  +    +   ++    +S +G  L 
Sbjct: 673 NRQQIAIS--TDQEIQLWQYLED--KLSQTLTRPHVSHVRFSANGDKLA 717


>gi|158337851|ref|YP_001519027.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158308092|gb|ABW29709.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 858

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 69/217 (31%), Gaps = 14/217 (6%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              TG+   +++R     + + +     ++ + D +G      +      + + RFSP+ 
Sbjct: 618 HWNTGQDAVWSTRFSPNGQYLATAGWDGTVRIWDLEGTQRFQTSQKHQGPVKDIRFSPDG 677

Query: 224 QKVAYATYDDE--------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           + +A A  D                  + +     K        I +   S +  + L+S
Sbjct: 678 KWLASAGEDGAIQLWKLCVGATCPNSDEVQSLDLQKAWNGHSGWIWSLDISPD-SQVLVS 736

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +D  +  + +D  +   +R            +SPD   +   S  +G  Q+     NG
Sbjct: 737 AGEDGIIRFWDLDNPNAPPQRWRYGQGRITQIRFSPDGQWLA-ISGWDGTVQIR--DRNG 793

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               +             ++P   ++      G+   
Sbjct: 794 RIFSQ--WQSRRPVTSLSFTPDQQMLLVGTVMGDVHQ 828



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 61/157 (38%), Gaps = 18/157 (11%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREG 324
           S +GK   +S       +   + LQ+N  +RL +     + S  ++P + Q+V  +   G
Sbjct: 551 SPDGKTIAVS----GWGNSVRL-LQNNRQQRLIHPDAEMVISTDFNPQTDQVV-TASLNG 604

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             +L+   S      +     + + +   +SP G  +A   + G    + +   +G+Q  
Sbjct: 605 TVRLW---SATGQALQHWNTGQDAVWSTRFSPNGQYLATAGWDGT---VRIWDLEGTQRF 658

Query: 385 LLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                    ++   +SP G+ L        D   +L+
Sbjct: 659 QTSQKHQGPVKDIRFSPDGKWLA---SAGEDGAIQLW 692



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 80/248 (32%), Gaps = 40/248 (16%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG----- 254
           G ++R L  +R Q L  P    + + V    ++ +    V        R     G     
Sbjct: 563 GNSVRLLQNNRQQRLIHP----DAEMVISTDFNPQTDQVVTASLNGTVRLWSATGQALQH 618

Query: 255 --NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSP 311
               +  + + RFS NG+    +   D  + I+  DL+     + +           +SP
Sbjct: 619 WNTGQDAVWSTRFSPNGQYLA-TAGWDGTVRIW--DLEGTQRFQTSQKHQGPVKDIRFSP 675

Query: 312 DSSQIVFESDREGKEQLYVM----------QSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           D   +   +  +G  QL+ +          +    D ++         +    SP   ++
Sbjct: 676 DGKWLA-SAGEDGAIQLWKLCVGATCPNSDEVQSLDLQKAWNGHSGWIWSLDISPDSQVL 734

Query: 362 AFTKFSGEKFAIGVMKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLIFS--------RKK 410
                +GE   I     D      +R       +    +SP G+ L  S        R +
Sbjct: 735 V---SAGEDGIIRFWDLDNPNAPPQRWRYGQGRITQIRFSPDGQWLAISGWDGTVQIRDR 791

Query: 411 DGDTGSKL 418
           +G   S+ 
Sbjct: 792 NGRIFSQW 799


>gi|291326957|ref|ZP_06126480.2| putative cytoplasmic protein [Providencia rettgeri DSM 1131]
 gi|291312036|gb|EFE52489.1| putative cytoplasmic protein [Providencia rettgeri DSM 1131]
          Length = 443

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 54/156 (34%), Gaps = 20/156 (12%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                     +     RLT T       +      +   SPD   I    +D +G  QL+
Sbjct: 287 GTESSMPSPPKGIQQRRLTYTHDKKFPGLAKQPRHWLRTSPDGKSIACLMNDDDGNAQLW 346

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++ +    Q++I+Q          W  +G+ I F   +   +            + L + 
Sbjct: 347 LVDTLTGVQRQITQGSSPVQSAFSWDSKGEHICFICDNSVVY----CHVVSGTIQKLTQR 402

Query: 390 SN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +       A  +SP+   + F R  DG    ++Y++
Sbjct: 403 TELAPVADAVVFSPNDELIAFMRDIDGFR--QIYTV 436



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 12/132 (9%)

Query: 256 FRSMILAPR-F---SSNGKRAL-ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SY 309
           F  +   PR +   S +GK    +    D    ++ VD  +    ++T       SA S+
Sbjct: 312 FPGLAKQPRHWLRTSPDGKSIACLMNDDDGNAQLWLVDTLTGVQRQITQGSSPVQSAFSW 371

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFS 367
                 I F  D      +Y    +G+ QK ++Q  E +      V+SP  +LIAF +  
Sbjct: 372 DSKGEHICFICD---NSVVYCHVVSGTIQK-LTQRTELAPVADAVVFSPNDELIAFMRDI 427

Query: 368 GEKFAIGVMKKD 379
                I  ++  
Sbjct: 428 DGFRQIYTVETG 439



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 76/281 (27%), Gaps = 68/281 (24%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRID----------RAPKRIGNFRSMILAPRFSSNGK 270
           P++Q      YD      VY+ + +++            P  +G  R       FS +GK
Sbjct: 101 PDEQW----QYDFHHRRGVYVKEDQLNVAHPIDAMCITPPYLVGALRGGTHVHVFSPDGK 156

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----SYSPDSSQIVFESDREGK 325
               +   D  M    V L             +N+S       YS           R   
Sbjct: 157 WLSFTYN-DHVMHELDVQLDQRNVAIAVPIGPVNVSPKIHFREYS--GDYFCCVVTRT-T 212

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---TKFSGEKF--AIGVMK--- 377
           +Q        S         +  Y       Q   + F   T  +  +    I ++    
Sbjct: 213 QQPKPSSDEISRAYEEGWVGQKGYQKENGEWQERALVFIGDTHSTNGEIIPEIYIVDLPS 272

Query: 378 -----------------------KDGSQERLLVEDSNLQAP-------TW---SPSGRSL 404
                                    G Q+R L    + + P        W   SP G+S+
Sbjct: 273 QLEDYMIAGESPIQGTESSMPSPPKGIQQRRLTYTHDKKFPGLAKQPRHWLRTSPDGKSI 332

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
                 D D  ++L+ +D     +  I      S P    F
Sbjct: 333 ACLMNDD-DGNAQLWLVDTLTGVQRQIT---QGSSPVQSAF 369


>gi|119509146|ref|ZP_01628297.1| WD-40 repeat protein [Nodularia spumigena CCY9414]
 gi|119466312|gb|EAW47198.1| WD-40 repeat protein [Nodularia spumigena CCY9414]
          Length = 332

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 66/217 (30%), Gaps = 23/217 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                +     S + + +     D      + + D    R    +  F + I     S +
Sbjct: 133 GHSSNVMSLAVSADSRVLVSGALDG-----IRMWDLLQQRPLATLVRFDNSIHTLAMSPD 187

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFES-DREGKE 326
           G+  + S      + ++  +L +    R  T       + +++PD S  V  S DR    
Sbjct: 188 GQTLV-SGDNKGVIKLW--NLNTGELIREFTGHSRTVTTLAFTPDGSNFVTASRDRT--- 241

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + V   N +   R              +  G  +A     G    + +      +    
Sbjct: 242 -IKVWNLNANQPVRTLTGHNNWVNAIAINRDGQTLASAGRDG----VKLWNLTTGELVNT 296

Query: 387 VEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
           +   +       +SP G++L        D    +++I
Sbjct: 297 LMGHSDWVSAIAFSPDGQTLA---SGSFDGRVNIWAI 330



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 83/283 (29%), Gaps = 30/283 (10%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIG---------KKFFSSPASWRKIAHTISDDIY-- 163
           +++  G  +      LW+    K++           K    SP     I+ +  + I   
Sbjct: 61  QILASGGSKNDGIIELWNTGTGKRVARIRKAHKTGVKSLVISPDGQTLISCSSDNTINLW 120

Query: 164 --------QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
                   +S  G   +  S  +     V+     + + + D             D  + 
Sbjct: 121 NLRNNKFSRSFVGHSSNVMSLAVSADSRVLVSGALDGIRMWDLLQQRPLATLVRFDNSIH 180

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               SP+ Q +       ++   + L +       +        +    F+ +G    ++
Sbjct: 181 TLAMSPDGQTLV----SGDNKGVIKLWNLNTGELIREFTGHSRTVTTLAFTPDGSN-FVT 235

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +D  + +++++        LT       + + + D   +       G++ + +     
Sbjct: 236 ASRDRTIKVWNLNAN-QPVRTLTGHNNWVNAIAINRDGQTLA----SAGRDGVKLWNLTT 290

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +                +SP G  +A   F G +  I  +  
Sbjct: 291 GELVNTLMGHSDWVSAIAFSPDGQTLASGSFDG-RVNIWAIAP 332


>gi|291439114|ref|ZP_06578504.1| protease [Streptomyces ghanaensis ATCC 14672]
 gi|291342009|gb|EFE68965.1| protease [Streptomyces ghanaensis ATCC 14672]
          Length = 1161

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 56/183 (30%), Gaps = 43/183 (23%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           NG       + D    ++   L       RLT          +SPD   I + S      
Sbjct: 79  NGDLLCFVAEDD----LWLAPLDGPGRAWRLTVDRTKLGHPRFSPDGRHIAYTSWFSLDP 134

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSP-----QGDLIAFTKFS-------------- 367
           +++++  +G   +R++    +      W+P       +++A T                 
Sbjct: 135 EVHLVPVDGGPARRLTHWGSSDTRVCGWAPPEGENDAEILAVTSHDEPFSYFTWAYKIAC 194

Query: 368 ----------GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                     G    I V    G +  LL+  +    P          + R + G TG +
Sbjct: 195 YGSPGRKLPWGPVTDIQVADLAGERRTLLLTGTPPHEPA--------SWKRYRGGATG-R 245

Query: 418 LYS 420
           L+ 
Sbjct: 246 LWL 248



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 58/352 (16%), Positives = 102/352 (28%), Gaps = 91/352 (25%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGII-----KNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           + +    G    R+ ++    ++G +     ++ L +   DG    +        L  PR
Sbjct: 57  ELLRPIPGKSMGRVSYLRLPHLNGDLLCFVAEDDLWLAPLDGPGRAWRLTVDRTKLGHPR 116

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRAL 273
           FSP+ + +AY ++   D   V+L+      A +      S      ++      + +   
Sbjct: 117 FSPDGRHIAYTSWFSLDP-EVHLVPVDGGPARRLTHWGSSDTRVCGWAPPEGENDAEILA 175

Query: 274 ISVQK------------------------DEAMDIYSVDLQSNATERLTNTLFINISASY 309
           ++                               DI   DL       L      +  AS+
Sbjct: 176 VTSHDEPFSYFTWAYKIACYGSPGRKLPWGPVTDIQVADLAGERRTLLLTGTPPHEPASW 235

Query: 310 SP--------------------DS---------SQIVFESDREGKEQLYVMQSNGSDQKR 340
                                 D           +I F SD EG   LY    +GSD +R
Sbjct: 236 KRYRGGATGRLWLHGQRLLEGLDGHLHSPLFVAGRIAFLSDHEGVGNLYSCAYDGSDLRR 295

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK--KDGSQERLL--------VEDS 390
              D +A Y     S  G  + +         + ++     GS  R L            
Sbjct: 296 -HTDHDAFYARHAAS-DGTRVVYQCAGD----LWLVDDLSPGSVPRRLDVRLSGPRTGRR 349

Query: 391 NLQAPTWSP-SGRSLIFSRKKDGDTGSKL------YSIDLNGRNETLINTPA 435
             Q P      G S+     + G   + +      +    +G   TL +TP 
Sbjct: 350 RYQVPAAHHLDGLSV----DETGRASAVVVRGSLYWLTHRDGPARTLTDTPG 397



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 73/220 (33%), Gaps = 22/220 (10%)

Query: 242 MDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNA--TER 296
             T  D   + + +   + +  P       +       +   A++I S+   S      R
Sbjct: 381 WLTHRDGPARTLTDTPGVRVRLPEMLGESGQVAYVTDAEGEDAVEIASLPRASGQRPPRR 440

Query: 297 LTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSN----GSDQKRISQDKEASYFD 351
           L +      +     PD  ++   +  +G+  L     +    G     + +       D
Sbjct: 441 LASGKLGRVLEMVADPDGERLA-VAAHDGRLLLVDTDPSQDGSGGGVTELIRSVNGPVRD 499

Query: 352 PVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRS 403
             +SP G  +A++      S  +  +  +      ER +V+        + P ++  GR 
Sbjct: 500 LAFSPDGAWLAWSHPWIGRSLRQIKLARIAGTAEGERTVVDVTDGRFEDENPVFTRDGRY 559

Query: 404 LIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
           L F   +  D    +++ DL+   G    L+   +    P
Sbjct: 560 LAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSP 599



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 9/159 (5%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + ++ +V+++     ++ +           R L   +   + E    P+ +++A A +D 
Sbjct: 409 SGQVAYVTDAEGEDAVEIASLPRASGQRPPRRLASGKLGRVLEMVADPDGERLAVAAHDG 468

Query: 234 EDILRVY--LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDL 289
             +L       D       + I +    +    FS +G     S          I    +
Sbjct: 469 RLLLVDTDPSQDGSGGGVTELIRSVNGPVRDLAFSPDGAWLAWSHPWIGRSLRQIKLARI 528

Query: 290 QSNAT-ER----LTNTLFINISASYSPDSSQIVFESDRE 323
              A  ER    +T+  F + +  ++ D   + F S R 
Sbjct: 529 AGTAEGERTVVDVTDGRFEDENPVFTRDGRYLAFLSWRG 567


>gi|206564164|ref|YP_002234927.1| hypothetical protein BCAM2328 [Burkholderia cenocepacia J2315]
 gi|198040204|emb|CAR56187.1| putative exported protein with coagulation factor 5/8 type
           C-terminal domain [Burkholderia cenocepacia J2315]
          Length = 469

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 71/213 (33%), Gaps = 14/213 (6%)

Query: 225 KVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDE 280
           K+ Y +Y    D      +     R   ++      I  P    FS +GK        + 
Sbjct: 46  KLVYHSYVKYGDGTSQLFLYDFSARTLTQLSKSAWGITDPMNGVFSPDGKWLAFMGISNG 105

Query: 281 AMDIYSVDL-QSNATERLTNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           A +++ + L        +T++     N    +S D   +VF+ + + K+      S G  
Sbjct: 106 AWNVFMLQLGAGTPPVNMTHSTGATRNEDPKFSADGKTLVFKQNGDVKQATLSYTSAGPV 165

Query: 338 QKRISQDKEAS----YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
              I     A     Y  P  +P    + +   +G    +           +    + LQ
Sbjct: 166 FTSIVSLTNAPAGAEYSMPFLAPDASAVYYATGTGSNMGLMKRTIATGVTAVFDRPAGLQ 225

Query: 394 --APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              PT    G  + ++R KD     ++Y+   +
Sbjct: 226 TYYPTVRADG-MVYYARWKDSGGADQIYAKTAD 257



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 86/267 (32%), Gaps = 23/267 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYD 232
           +  L     V  G   + L + D     +  L+ S   I       FSP+ + +A+    
Sbjct: 44  TGKLVYHSYVKYGDGTSQLFLYDFSARTLTQLSKSAWGITDPMNGVFSPDGKWLAFMGIS 103

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +     V+++       P  + +         P+FS++GK  +     D      S    
Sbjct: 104 NG-AWNVFMLQLGAGTPPVNMTHSTGATRNEDPKFSADGKTLVFKQNGDVKQATLSYTSA 162

Query: 291 S---NATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                +   LTN            +PD+S + + +       L              +  
Sbjct: 163 GPVFTSIVSLTNAPAGAEYSMPFLAPDASAVYYATGTGSNMGLMKRTIATGVTAVFDRPA 222

Query: 346 EASYFDPVWSPQGDLIAFTKF--SGEKFAIG--VMKKDGSQERLLVED--SNLQAPTWSP 399
               + P     G ++ + ++  SG    I         +   L + D  SN   P  +P
Sbjct: 223 GLQTYYPTVRADG-MVYYARWKDSGGADQIYAKTADPASTPSALALNDCMSNNSDP--AP 279

Query: 400 -SGR-SLIFSRKKDGDTGSKLYSIDLN 424
            SG   L FS    G  G +LY  D+ 
Sbjct: 280 VSGTNYLFFSSTTAG--GYQLYVGDVT 304



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 56/137 (40%), Gaps = 11/137 (8%)

Query: 314 SQIVFESDR---EGKEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLIAFTKFSG 368
            ++V+ S     +G  QL++   +     ++S+         + V+SP G  +AF   S 
Sbjct: 45  GKLVYHSYVKYGDGTSQLFLYDFSARTLTQLSKSAWGITDPMNGVFSPDGKWLAFMGISN 104

Query: 369 EKFAIGVMKKD-GSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             + + +++   G+    +      +  + P +S  G++L+F  K++GD      S    
Sbjct: 105 GAWNVFMLQLGAGTPPVNMTHSTGATRNEDPKFSADGKTLVF--KQNGDVKQATLSYTSA 162

Query: 425 GRNETLINTPAYASDPQ 441
           G   T I +   A    
Sbjct: 163 GPVFTSIVSLTNAPAGA 179


>gi|327539898|gb|EGF26500.1| serine/threonine-protein kinase [Rhodopirellula baltica WH47]
          Length = 1073

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 89/248 (35%), Gaps = 24/248 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           SL     +G N++      D+   +P  R S    ++A+   D                 
Sbjct: 410 SLAFQAYNGHNLKATKELLDKHRPKPEERGS---SRLAFEILDY----------LITPPP 456

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K +    S       S NG +  ISV KD   +++ VDLQS              + + 
Sbjct: 457 SKLLTQHNSPATEVALSRNG-QIAISVSKDG--EVHVVDLQSEKLTHRYKLSGRLDAIAI 513

Query: 310 SPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD+   +   + + G   + + +     +         +     +S  G L A    +G
Sbjct: 514 SPDNKHFLTGLNGDVGFNSITLREIATGTETLGLLGHWHNIESAAFSSDGTLFA---TAG 570

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               + V + DG+  + +   S  ++  ++  G +L + ++        L+++DL+   E
Sbjct: 571 RYRDVQVHRFDGTAVKTVYGGSRNESLHFAGEGHTLAYVKEVGKQR--LLHAVDLDTDQE 628

Query: 429 TLINTPAY 436
           T +     
Sbjct: 629 TRVPVEGE 636


>gi|45361625|ref|NP_989387.1| WD repeat and SOCS box-containing protein 1 [Xenopus (Silurana)
           tropicalis]
 gi|82237435|sp|Q6P1V3|WSB1_XENTR RecName: Full=WD repeat and SOCS box-containing protein 1;
           Short=WSB-1
 gi|40675657|gb|AAH64858.1| WD repeat and SOCS box-containing 1 [Xenopus (Silurana) tropicalis]
          Length = 422

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 63/185 (34%), Gaps = 25/185 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                     ++SPDSS +   S   GK  +++   +     R             +SP 
Sbjct: 211 RGHQNWVYCCAFSPDSSML--CSVGAGK-AVFLWDMDKYTMIRKLDGHYNDVVACEFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + V         +L E  +L  P                 ++S  
Sbjct: 268 GALLATASYDT---RVYVWDPHIGS--ILFEFGHLFPPPTPIFAGGDNGRWVKSVSFSHD 322

Query: 401 GRSLI 405
           G  + 
Sbjct: 323 GVHIA 327



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/277 (14%), Positives = 88/277 (31%), Gaps = 49/277 (17%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           G   L+          R+++    WDV   K ++             + HT   ++ + +
Sbjct: 137 GQDQLLLA--TGLSNGRIKI----WDVYTGKLLLNL-----------MDHT---EVVRDL 176

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T      +  ++ VS S    +    +  +  DG N+  +       ++   FSP+   +
Sbjct: 177 TFAP---DGSLILVSASRDKTL---RVWDLKDDG-NMMKVLRGHQNWVYCCAFSPDSSML 229

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                       V+L D       +++    + ++A  FS +G     +   D  + ++ 
Sbjct: 230 CSV----GAGKAVFLWDMDKYTMIRKLDGHYNDVVACEFSPDGALLA-TASYDTRVYVWD 284

Query: 287 VDLQS---------NATERLTNTLFINI---SASYSPDSSQIVFESDREGKEQLYVMQSN 334
             + S              +           S S+S D   I   +D      +   + +
Sbjct: 285 PHIGSILFEFGHLFPPPTPIFAGGDNGRWVKSVSFSHDGVHIASLAD---DNLVRFWRID 341

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            S    ++   +       +S  G ++A     G  +
Sbjct: 342 KSYPVEVAPLSKG--LCCAFSTDGSVLAAGTQDGNAY 376



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 31/99 (31%), Gaps = 4/99 (4%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 149 NGRIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 208

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +L    N      +SP    L             L+ +D
Sbjct: 209 VLRGHQNWVYCCAFSPDSSML---CSVGAGKAVFLWDMD 244


>gi|255940728|ref|XP_002561133.1| Pc16g08110 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585756|emb|CAP93481.1| Pc16g08110 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 624

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 56/192 (29%), Gaps = 26/192 (13%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDL 289
           D    + V      I+     +G  R       FS  GK             +D ++ DL
Sbjct: 258 DAPQPIEVKGKKLVINHDAISVGELRG------FSGTGKEITYVGHPVESSNIDAFAADL 311

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY---------VMQSNGSDQKR 340
            +    RLT           SPD    V    R    Q++         V     +    
Sbjct: 312 TTGKVRRLTEHPEYVDPLDISPDDQWAVILDTRGTDRQMWLSGMRGIPPVTDLITTSITS 371

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTW 397
            +++     F   W     LI +    G  F    +   G      + D N      P W
Sbjct: 372 ATRNNGRRRFFVPW-----LIDYHGDRGSYFG-QQINAAGDGTAGAINDPNWNTWADPRW 425

Query: 398 SPSGRSLIFSRK 409
           SP G  +++ + 
Sbjct: 426 SPDGTQVMYYQN 437



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 51/152 (33%), Gaps = 9/152 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS   +++ Y  +  E                +R+      +     S + + A+I   +
Sbjct: 285 FSGTGKEITYVGHPVESSNIDAFAADLTTGKVRRLTEHPEYVDPLDISPDDQWAVILDTR 344

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------SDREGKEQLYVM 331
                ++   ++      +T+ +  +I+++   +  +  F         DR       + 
Sbjct: 345 GTDRQMWLSGMRG--IPPVTDLITTSITSATRNNGRRRFFVPWLIDYHGDRGSYFGQQIN 402

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +       I+     ++ DP WSP G  + +
Sbjct: 403 AAGDGTAGAINDPNWNTWADPRWSPDGTQVMY 434


>gi|171315411|ref|ZP_02904648.1| coagulation factor 5/8 type domain protein [Burkholderia ambifaria
           MEX-5]
 gi|171099411|gb|EDT44146.1| coagulation factor 5/8 type domain protein [Burkholderia ambifaria
           MEX-5]
          Length = 470

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 14/213 (6%)

Query: 225 KVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDE 280
           K+ Y +Y    D      +     R   ++      I  P    FS +GK        + 
Sbjct: 46  KLVYHSYVKYGDGTSQLFLYDFSARTLTQLSKSNWGITDPMNGVFSPDGKWLAFMGISNG 105

Query: 281 AMDIYSVDL-QSNATERLTNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQSNG-- 335
           A +++ + L        LTN+     N    ++ D   +VF+ + + K+      S G  
Sbjct: 106 AWNVFMLQLGAGTPPVNLTNSTGATRNEDPKFATDGKTLVFKQNGDVKQGTLSYTSAGPV 165

Query: 336 -SDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            +    ++     S Y  P  +P    + +   +G    +           +    + LQ
Sbjct: 166 FTSVVSLTNAPAGSEYSMPFLAPDASAVYYATSTGSNMGLMKRTIATGATAVFDHPAGLQ 225

Query: 394 --APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              P     G  + ++R KD     ++Y+   +
Sbjct: 226 TYYPVVRGDG-MVFYARWKDSGGADQIYTKTAD 257



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 82/284 (28%), Gaps = 59/284 (20%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSP 221
           QS     G    ++++    V  G   + L + D     +  L+ S   I       FSP
Sbjct: 34  QSNASFPGALTGKLVY-HSYVKYGDGTSQLFLYDFSARTLTQLSKSNWGITDPMNGVFSP 92

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKD 279
           + + +A+    +     V+++       P  + N         P+F+++GK  +     D
Sbjct: 93  DGKWLAFMGISNG-AWNVFMLQLGAGTPPVNLTNSTGATRNEDPKFATDGKTLVFKQNGD 151

Query: 280 EAMDIYSVDLQS---NATERLTNTLF--INISASYSPDSSQIVFES-------------- 320
                 S         +   LTN            +PD+S + + +              
Sbjct: 152 VKQGTLSYTSAGPVFTSVVSLTNAPAGSEYSMPFLAPDASAVYYATSTGSNMGLMKRTIA 211

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQDKE-- 346
                                           D  G +Q+Y   ++ +         +  
Sbjct: 212 TGATAVFDHPAGLQTYYPVVRGDGMVFYARWKDSGGADQIYTKTADPASTPSALPINDCM 271

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++  DP      + + F+  +   + + V      Q   L +  
Sbjct: 272 SNNSDPAPVSGTNYVFFSSTTAGGYQLYVGDVTTGQRWSLSQFG 315


>gi|119387354|ref|YP_918388.1| peptidase S9 prolyl oligopeptidase [Paracoccus denitrificans
           PD1222]
 gi|119377929|gb|ABL72692.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Paracoccus denitrificans PD1222]
          Length = 747

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 82/239 (34%), Gaps = 46/239 (19%)

Query: 191 NSLCVMDRDGANI-----RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV--YLMD 243
           + L  +DR+G  +     R ++   + ++  P +  +     Y      D  R+  + +D
Sbjct: 242 SELWFIDRNGQRVPARMDRLVSFGANPLISYPAWWSDNGGHFYLHEGSRDGDRLDFWQVD 301

Query: 244 TRIDRAPKRIGNFRSMILAPRFSS--------NGKRALISVQKDEAMDIYSV-DLQSNAT 294
           T      + +         P FS         +G R L S   D    +Y V      + 
Sbjct: 302 TATGDTRRLVIEEGPAAGRPCFSPSPQPQVLRDG-RILWSSMADGWRHLYFVEPGDPRSR 360

Query: 295 ERLTNTLFINIS-ASYSPDSSQIVFESDREGKE--------QLYVMQSNGSDQKRISQ-- 343
            R+T   +  +S      D+  ++F +   G+E        Q+Y ++ +G+D +R++   
Sbjct: 361 RRITAGGWNVVSILHVDEDAETVLFAA--AGREPRLDPYYLQVYSIRFDGTDLRRLTHQD 418

Query: 344 ---------------DKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLL 386
                             +  +    SP G        + ++  +  +  ++G     L
Sbjct: 419 LNHDLSLPSRALTQVPAGSGRYPNGTSPDGTFFVAAHEAPDRPPVSALYDRNGRVVTTL 477



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/236 (12%), Positives = 79/236 (33%), Gaps = 33/236 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-- 275
           +SP+  ++A    D   +   +L++    D +  R+ +F   +         +   +S  
Sbjct: 191 WSPDSSRIATLRTDLRQVPLAHLIEAIPPDGSRPRLHSFPYPV------PGDEHGALSEL 244

Query: 276 --VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKE-QLYVM 331
             + ++       +D              I+  A +S +       E  R+G     + +
Sbjct: 245 WFIDRNGQRVPARMD----RLVSFGANPLISYPAWWSDNGGHFYLHEGSRDGDRLDFWQV 300

Query: 332 QSNGSDQKRISQDKEASYFDPVWSP--------QGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            +   D +R+  ++  +   P +SP         G  I ++  +     +  ++    + 
Sbjct: 301 DTATGDTRRLVIEEGPAAGRPCFSPSPQPQVLRDGR-ILWSSMADGWRHLYFVEPGDPRS 359

Query: 384 RLLVEDSNLQAPTWSP---SGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLIN 432
           R  +        +         +++F+      +      ++YSI  +G +   + 
Sbjct: 360 RRRITAGGWNVVSILHVDEDAETVLFAAAGREPRLDPYYLQVYSIRFDGTDLRRLT 415



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 85/272 (31%), Gaps = 53/272 (19%)

Query: 221 PNQQKVAYATY-------DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------FSS 267
           P+  +    ++       +   +  ++ +D    R P R+    S    P       +S 
Sbjct: 219 PDGSRPRLHSFPYPVPGDEHGALSELWFIDRNGQRVPARMDRLVSFGANPLISYPAWWSD 278

Query: 268 NGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSP--------DSSQI 316
           NG    +    +  + +D + VD  +  T RL            +SP        D  +I
Sbjct: 279 NGGHFYLHEGSRDGDRLDFWQVDTATGDTRRLVIEEGPAAGRPCFSPSPQPQVLRDG-RI 337

Query: 317 VFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFT------KFSGE 369
           ++ S  +G   LY ++  +   ++RI+                + + F       +    
Sbjct: 338 LWSSMADGWRHLYFVEPGDPRSRRRITAGGWNVVSILHVDEDAETVLFAAAGREPRLDPY 397

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTW-------------------SPSGRSLIFSRKK 410
              +  ++ DG+  R L         +                    SP G   + +  +
Sbjct: 398 YLQVYSIRFDGTDLRRLTHQDLNHDLSLPSRALTQVPAGSGRYPNGTSPDGTFFV-AAHE 456

Query: 411 DGDTGSKLYSIDLNGRNETLI-NTPAYASDPQ 441
             D        D NGR  T + +  A A+ P 
Sbjct: 457 APDRPPVSALYDRNGRVVTTLEHADAGAAWPA 488


>gi|325282246|ref|YP_004254788.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Odoribacter splanchnicus DSM 20712]
 gi|324314055|gb|ADY34608.1| peptidase S9B dipeptidylpeptidase IV domain protein [Odoribacter
           splanchnicus DSM 20712]
          Length = 744

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 80/243 (32%), Gaps = 35/243 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDT--RIDRAPKRIGNFRSMILAPRF-----SSNGKR 271
           FS + +++ + T   +            ++   P+R       +    +     S +GK+
Sbjct: 110 FSDDLKQLTFVTEGMKYTYDRNKNKVIGKVKEEPRRREGHWGGVNEENWQGATPSPDGKK 169

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--------SYSPDSSQIVFESDR- 322
                + +    ++  D+ S    RL      + +         S+SPDS ++V    R 
Sbjct: 170 EAFVSEGN----LFVRDISSGKVNRL----SYDGAPGEYYSSFISWSPDSRKLVSCKYRP 221

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               +L  + S+ + Q +   ++          P    + F    G +  I   + +   
Sbjct: 222 AWIRKLKTVVSSPAGQLQPKMEEIDYVKPGDALPVKRPVLFLVEEGRQVNIEFAEPE--- 278

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                +  NL    W+   RS  F   K G     +Y +  +     ++        P +
Sbjct: 279 -----KQFNLNNIRWADDSRSFTFDYNKRGHQEYIVYKVTGDNPKAQVLI---GEKMPTF 330

Query: 443 VGF 445
           V +
Sbjct: 331 VYY 333



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 37/273 (13%), Positives = 84/273 (30%), Gaps = 38/273 (13%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAH--TISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           +D    K I            R+  H   ++++ +Q  T          +      V  I
Sbjct: 128 YDRNKNKVIG----KVKEEPRRREGHWGGVNEENWQGATPSPDGKKEAFVSEGNLFVRDI 183

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               +  +  DGA         +       +SP+ +K+    Y    I ++  + +    
Sbjct: 184 SSGKVNRLSYDGAP-------GEYYSSFISWSPDSRKLVSCKYRPAWIRKLKTVVSSPAG 236

Query: 249 APK----RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             +     I   +     P      KR ++ + ++       V+++    E+  N   I 
Sbjct: 237 QLQPKMEEIDYVKPGDALPV-----KRPVLFLVEEGRQ----VNIEFAEPEKQFNLNNI- 286

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-------RISQDKEASYFDPVWSPQ 357
               ++ DS    F+ ++ G ++  V +  G + K       ++      +         
Sbjct: 287 ---RWADDSRSFTFDYNKRGHQEYIVYKVTGDNPKAQVLIGEKMPTFVYYNLLYRYDLKD 343

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVED 389
            + I +         + +   D  Q  R L + 
Sbjct: 344 RNEILWISERDGWRHLYLYDADNGQVKRQLTKG 376


>gi|325269973|ref|ZP_08136582.1| OmpA family protein [Prevotella multiformis DSM 16608]
 gi|324987696|gb|EGC19670.1| OmpA family protein [Prevotella multiformis DSM 16608]
          Length = 697

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 54/159 (33%), Gaps = 22/159 (13%)

Query: 299 NTLFINISASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQK-------RISQDKEAS 348
           NT     + + S D  ++      +D        +  SN SD          IS+D  +S
Sbjct: 235 NTEADEGTPALSADGREMYITQCLTDPSYPRYAQIAVSNRSDAAWGKATKLEISRDTLSS 294

Query: 349 YFDPVWSPQGDLIAFTKF---SGEKFAIGVMKKDGSQE-------RLLVEDSNLQAPTWS 398
           +  P  SP G+ + FT           I  ++  G            +    + + PT+ 
Sbjct: 295 FAHPAVSPDGNWLYFTSDMPGGKGGLDIWRVRLTGGTTGGAENLGEPVNTPGDEEFPTFR 354

Query: 399 PSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETLINTPAY 436
           P+G  L FS     G  G  +Y   +       +  P Y
Sbjct: 355 PNGD-LYFSSNGHGGLGGLDIYIAKVGSDRRYHLEHPGY 392



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 57/183 (31%), Gaps = 40/183 (21%)

Query: 299 NTLFINISASYSPD-SSQIVFESDR-----EGKEQLYVMQSNG------------SDQKR 340
           N+   + S   + D S Q+ F S R     +G   +  +++              S  K 
Sbjct: 170 NSRRQDYSPMLAGDKSEQLYFTSTRNEAKGDGLSGITGVKAGDIFLSEKDEKGKWSPPKA 229

Query: 341 ISQD--KEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKD----GSQERLLVED 389
           I      EA    P  S  G  +  T+            I V  +     G   +L +  
Sbjct: 230 IESGLNTEADEGTPALSADGREMYITQCLTDPSYPRYAQIAVSNRSDAAWGKATKLEISR 289

Query: 390 ---SNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNE-------TLINTPAYAS 438
              S+   P  SP G  L F+     G  G  ++ + L G            +NTP    
Sbjct: 290 DTLSSFAHPAVSPDGNWLYFTSDMPGGKGGLDIWRVRLTGGTTGGAENLGEPVNTPGDEE 349

Query: 439 DPQ 441
            P 
Sbjct: 350 FPT 352



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 42/143 (29%), Gaps = 20/143 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRS 258
           ++         P  SP+   + + +        + +   R+               N   
Sbjct: 287 ISRDTLSSFAHPAVSPDGNWLYFTSDMPGGKGGLDIWRVRLTGGTTGGAENLGEPVNTPG 346

Query: 259 MILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERL------TNTLFINISASY 309
               P F  NG     S         +DIY   + S+    L       N+   +   ++
Sbjct: 347 DEEFPTFRPNGD-LYFSSNGHGGLGGLDIYIAKVGSDRRYHLEHPGYPLNSQGDDFGMTF 405

Query: 310 SPDSSQIVFESDRE---GKEQLY 329
               ++  F S+R    G + +Y
Sbjct: 406 EGLHNRGFFSSNRGDGRGWDHIY 428


>gi|149632946|ref|XP_001506670.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 417

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 70/204 (34%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 147 RIKIWDVYTGKLLLNLMDHSEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 206

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S +++PDSS +         + +++   +     R  +          +SP 
Sbjct: 207 RGHQNWVYSCAFAPDSSMLC---SVGASKAVFLWNMDKYTMIRKLEGHHNDVVACEFSPD 263

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + V         +L+E  +L  P                 ++S  
Sbjct: 264 GALLATASYDT---RVYVWDPYTGS--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 318

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 319 GLHIA---SLADDKMVRFWRIDED 339



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 58/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L +   +    +++PD S I+  + R+   +++ 
Sbjct: 138 LLATGLNNGRIKIW--DVYTGKLLLNLMDHSEVVRDLTFAPDGSLILVSASRDKTLRVWD 195

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K + +  +   +   ++P   ++     S   F +  M K     +L    +
Sbjct: 196 LKDDGNMMKVL-RGHQNWVYSCAFAPDSSMLCSVGASKAVF-LWNMDKYTMIRKLEGHHN 253

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 254 DVVACEFSPDGALLATASY 272


>gi|326930067|ref|XP_003211174.1| PREDICTED: WD repeat and SOCS box-containing protein 2-like
           [Meleagris gallopavo]
          Length = 443

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 72/200 (36%), Gaps = 22/200 (11%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           ++ + + +       +   + ++    F+ NG   L+S  +D  + ++ +       + L
Sbjct: 130 QIKVWEVQTGHLLFSLLGHQDVVRDLSFAPNGSLILVSASRDRTLRVWDLSRDGRQVQVL 189

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T  +      S SPD S +       G++   +         R  +  ++S     +SP 
Sbjct: 190 TGHVQWVYCCSISPDCSMLC---SAAGEKSALLWSMRSYTLIRKLEGHQSSVVSCDFSPD 246

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLL--------------VEDSNLQAPTWSPSGRS 403
             L+    +      I      G Q R L              V  S+L++  +SP G  
Sbjct: 247 SALLVTASYD--TCVIMWDPYTGEQLRTLRHVPLHSALEYSSDVHTSSLRSVCFSPEG-- 302

Query: 404 LIFSRKKDGDTGSKLYSIDL 423
            ++      D   ++++++L
Sbjct: 303 -LYLATVADDRLLRIWALEL 321


>gi|239930747|ref|ZP_04687700.1| protease [Streptomyces ghanaensis ATCC 14672]
          Length = 1092

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 56/183 (30%), Gaps = 43/183 (23%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           NG       + D    ++   L       RLT          +SPD   I + S      
Sbjct: 10  NGDLLCFVAEDD----LWLAPLDGPGRAWRLTVDRTKLGHPRFSPDGRHIAYTSWFSLDP 65

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSP-----QGDLIAFTKFS-------------- 367
           +++++  +G   +R++    +      W+P       +++A T                 
Sbjct: 66  EVHLVPVDGGPARRLTHWGSSDTRVCGWAPPEGENDAEILAVTSHDEPFSYFTWAYKIAC 125

Query: 368 ----------GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                     G    I V    G +  LL+  +    P          + R + G TG +
Sbjct: 126 YGSPGRKLPWGPVTDIQVADLAGERRTLLLTGTPPHEPA--------SWKRYRGGATG-R 176

Query: 418 LYS 420
           L+ 
Sbjct: 177 LWL 179



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 73/220 (33%), Gaps = 22/220 (10%)

Query: 242 MDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNA--TER 296
             T  D   + + +   + +  P       +       +   A++I S+   S      R
Sbjct: 312 WLTHRDGPARTLTDTPGVRVRLPEMLGESGQVAYVTDAEGEDAVEIASLPRASGQRPPRR 371

Query: 297 LTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSN----GSDQKRISQDKEASYFD 351
           L +      +     PD  ++   +  +G+  L     +    G     + +       D
Sbjct: 372 LASGKLGRVLEMVADPDGERLA-VAAHDGRLLLVDTDPSQDGSGGGVTELIRSVNGPVRD 430

Query: 352 PVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRS 403
             +SP G  +A++      S  +  +  +      ER +V+        + P ++  GR 
Sbjct: 431 LAFSPDGAWLAWSHPWIGRSLRQIKLARIAGTAEGERTVVDVTDGRFEDENPVFTRDGRY 490

Query: 404 LIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
           L F   +  D    +++ DL+   G    L+   +    P
Sbjct: 491 LAFLSWRGFDPVYDVHTGDLSFPLGCRPYLVPLSSATPSP 530



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 55/319 (17%), Positives = 89/319 (27%), Gaps = 86/319 (26%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +   DG    +        L  PRFSP+ + +AY ++   D   V+L+      A +
Sbjct: 21  DLWLAPLDGPGRAWRLTVDRTKLGHPRFSPDGRHIAYTSWFSLDP-EVHLVPVDGGPARR 79

Query: 252 RIGNFRSMILAPRFSS-----NGKRALISVQK------------------------DEAM 282
                 S      ++      + +   ++                               
Sbjct: 80  LTHWGSSDTRVCGWAPPEGENDAEILAVTSHDEPFSYFTWAYKIACYGSPGRKLPWGPVT 139

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSP--------------------DS--------- 313
           DI   DL       L      +  AS+                      D          
Sbjct: 140 DIQVADLAGERRTLLLTGTPPHEPASWKRYRGGATGRLWLHGQRLLEGLDGHLHSPLFVA 199

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +I F SD EG   LY    +GSD +R   D +A Y     S  G  + +         +
Sbjct: 200 GRIAFLSDHEGVGNLYSCAYDGSDLRR-HTDHDAFYARHAAS-DGTRVVYQCAGD----L 253

Query: 374 GVMK--KDGSQERLL--------VEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKL---- 418
            ++     GS  R L              Q P      G S+     + G   + +    
Sbjct: 254 WLVDDLSPGSVPRRLDVRLSGPRTGRRRYQVPAAHHLDGLSV----DETGRASAVVVRGS 309

Query: 419 --YSIDLNGRNETLINTPA 435
             +    +G   TL +TP 
Sbjct: 310 LYWLTHRDGPARTLTDTPG 328



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 55/159 (34%), Gaps = 9/159 (5%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + ++ +V+++     ++ +           R L   +   + E    P+ +++A A +D 
Sbjct: 340 SGQVAYVTDAEGEDAVEIASLPRASGQRPPRRLASGKLGRVLEMVADPDGERLAVAAHDG 399

Query: 234 EDILRVY--LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDL 289
             +L       D       + I +    +    FS +G     S          I    +
Sbjct: 400 RLLLVDTDPSQDGSGGGVTELIRSVNGPVRDLAFSPDGAWLAWSHPWIGRSLRQIKLARI 459

Query: 290 QSNAT-ER----LTNTLFINISASYSPDSSQIVFESDRE 323
              A  ER    +T+  F + +  ++ D   + F S R 
Sbjct: 460 AGTAEGERTVVDVTDGRFEDENPVFTRDGRYLAFLSWRG 498



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            GDL+ F         + +   DG     RL V+ + L  P +SP GR + ++       
Sbjct: 10  NGDLLCFVAEDD----LWLAPLDGPGRAWRLTVDRTKLGHPRFSPDGRHIAYTSW--FSL 63

Query: 415 GSKLYSIDLNGRNETLIN 432
             +++ + ++G     + 
Sbjct: 64  DPEVHLVPVDGGPARRLT 81


>gi|294663939|ref|ZP_06729365.1| dipeptidyl peptidase IV [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292606290|gb|EFF49515.1| dipeptidyl peptidase IV [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 748

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 91/279 (32%), Gaps = 69/279 (24%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+   + +        L +Y +      A +++ +        + S  G       ++
Sbjct: 116 WAPDAHALLFP---LGGELYLYDLRKTGAAAVRKLTHGEGFATDAKLSPKGGFVSFVRER 172

Query: 279 DEAMDIYSVDLQSNATERLTNTLFI-----------------NISASYSPDSSQIVFE-- 319
           +    ++ ++L S    +LT+                     +    ++PD S I F   
Sbjct: 173 N----LWVIELASGNALQLTHDGSETIGNGVAEFVADEEMDRHTGYWWAPDDSAIAFARI 228

Query: 320 ---------------------SDR---EGKE----QLYVMQSNGSDQKR---ISQDKEAS 348
                                S R    G+     QL V+        R   + ++ +  
Sbjct: 229 DEAQVPVQKRPEVYADHTEVISQRYPQAGQPNVAVQLGVIAPRAKATPRWIDLGRNPDIY 288

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMK---KDGSQERLLVEDSNLQAP-----TWSPS 400
                W      + F + S ++  + +++     G+Q  L+ E S    P      +   
Sbjct: 289 LARVDW-RDAQRLTFQRQSRDQKTLELIETTLASGAQRTLITETSPTWVPLHNDLRFLKD 347

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           GR + ++ ++ G   + LY    +GR  T + +  +  D
Sbjct: 348 GRFV-WNSERSG--YAHLYLASEDGRTLTPLTSGNWVVD 383



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 68/207 (32%), Gaps = 55/207 (26%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-------------------- 246
            P     L +P+ +P+  +V +    D D  ++ L +  I                    
Sbjct: 32  LPLSGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWEYDIASGQTRLLVDSKVVLPGTEV 91

Query: 247 -------DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ER 296
                   R  +RI  F  ++   +++ +    L  +      ++Y  DL+        +
Sbjct: 92  LSDVEKARRERQRIAAFTGIVDY-QWAPDAHALLFPL----GGELYLYDLRKTGAAAVRK 146

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--- 353
           LT+       A  SP    + F  +R     L+V++    +  +++ D   +  + V   
Sbjct: 147 LTHGEGFATDAKLSPKGGFVSFVRER----NLWVIELASGNALQLTHDGSETIGNGVAEF 202

Query: 354 -------------WSPQGDLIAFTKFS 367
                        W+P    IAF +  
Sbjct: 203 VADEEMDRHTGYWWAPDDSAIAFARID 229



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 50/313 (15%), Positives = 98/313 (31%), Gaps = 65/313 (20%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--- 217
              + +T  +G      L      VS + + +L V++    N   LT    + +      
Sbjct: 142 AAVRKLTHGEGFATDAKLSPKGGFVSFVRERNLWVIELASGNALQLTHDGSETIGNGVAE 201

Query: 218 -------------RFSPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSM 259
                         ++P+   +A+A  D+     +    VY   T +           ++
Sbjct: 202 FVADEEMDRHTGYWWAPDDSAIAFARIDEAQVPVQKRPEVYADHTEVISQRYPQAGQPNV 261

Query: 260 -----ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                ++APR  +  +            DIY   +     +RLT           S D  
Sbjct: 262 AVQLGVIAPRAKATPRWI----DLGRNPDIYLARVDWRDAQRLTFQRQ-------SRDQK 310

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP---------QGDLIAFTK 365
            +         E +    ++G+ +  I++        P W P          G  + +  
Sbjct: 311 TL---------ELIETTLASGAQRTLITE------TSPTWVPLHNDLRFLKDGRFV-WNS 354

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR--SLIFSRKKDGDTGSKLYSIDL 423
                  + +  +DG     L   + +     +   +  ++ F+  KDG T + LY+I L
Sbjct: 355 ERSGYAHLYLASEDGRTLTPLTSGNWVVDALLAVDEQAGTVYFAASKDGPTQTHLYAIPL 414

Query: 424 NGRN-ETLINTPA 435
            G   E    T  
Sbjct: 415 AGGTIEKRSATNG 427


>gi|145532355|ref|XP_001451933.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124419610|emb|CAK84536.1| unnamed protein product [Paramecium tetraurelia]
          Length = 582

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 55/292 (18%), Positives = 106/292 (36%), Gaps = 54/292 (18%)

Query: 186 SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG   NS+ + D   G   +    +    +    FSP+   +A  + D      +YL+D 
Sbjct: 250 SGSDDNSVRIWDAKTGQLTKAKFNNHTGAVRSVCFSPDGNTLASGSCD----FSMYLLDV 305

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFI 303
           +      ++    + + +  FS NGK    S   D ++ ++  DL S   + +L     I
Sbjct: 306 KTGLKKSKLKAHTNWVQSLCFSPNGKTLA-SSSNDNSIRLW--DLNSAQQKSKLDILNEI 362

Query: 304 NISASYSPDSSQI--VF-----ESDREGKEQ-------LYVMQSNGSDQKRISQDKEASY 349
             S  +SPD + +  +F     +S              LYV  +NG+    +     A  
Sbjct: 363 AYSICFSPDGAALLHLFLGILSQSKESHSSMAIQKLSCLYVTPANGT----LLASGGADK 418

Query: 350 FDPVW-----------------------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           F  +W                       SP G ++A          +  +K    +  L+
Sbjct: 419 FICLWDIILERQKFKLDGHSQAVLSVCFSPDGMILASGSMDTTVI-LWDIKTGNQKSNLI 477

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             + ++ +  +SP+G +L+ S     D   +L+ I ++     +      +S
Sbjct: 478 GHEESIYSVCFSPNGSTLVSSSV---DKSIRLWEIQISKSKSKVSGNMRQSS 526



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 84/244 (34%), Gaps = 24/244 (9%)

Query: 127 EFRLWDVKDRKQ------IIGKKFFS--SPASWRKIAHTISDDIYQSITGEKGDFNSRI- 177
             RLWD+   +Q      +    +    SP     + H     + QS          ++ 
Sbjct: 341 SIRLWDLNSAQQKSKLDILNEIAYSICFSPDGA-ALLHLFLGILSQSKESHSSMAIQKLS 399

Query: 178 -LFVSESVV----SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            L+V+ +      SG     +C+ D      ++      Q +    FSP+   +A  + D
Sbjct: 400 CLYVTPANGTLLASGGADKFICLWDIILERQKFKLDGHSQAVLSVCFSPDGMILASGSMD 459

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 V L D +       +      I +  FS NG   + S   D+++ ++ + + S 
Sbjct: 460 T----TVILWDIKTGNQKSNLIGHEESIYSVCFSPNGSTLV-SSSVDKSIRLWEIQI-SK 513

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           +  +++  +  +    +S D   +   ++      + +       +K       ++    
Sbjct: 514 SKSKVSGNMRQSSQVCFSSDGFTLASVNE---DNAVILWNVKTGQEKANLVGHNSNVRSV 570

Query: 353 VWSP 356
            +SP
Sbjct: 571 CFSP 574



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 65/358 (18%), Positives = 129/358 (36%), Gaps = 71/358 (19%)

Query: 103 WNSLGA--QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK------- 153
           W +     Q+ + G +I  G D   V  R+WD K   Q+   KF +   + R        
Sbjct: 232 WKNENNIYQMGIAGTIIASGSDDNSV--RIWDAKTG-QLTKAKFNNHTGAVRSVCFSPDG 288

Query: 154 --IAHTISDDIYQSITGEKGDFNSRILFVSE------------SVVSGIIKNSLCVMDRD 199
             +A    D     +  + G   S++   +             ++ S    NS+ + D +
Sbjct: 289 NTLASGSCDFSMYLLDVKTGLKKSKLKAHTNWVQSLCFSPNGKTLASSSNDNSIRLWDLN 348

Query: 200 GANIRYLTPSRDQILFEPRFSPNQ-------------QKVAYATYDDEDILRVY------ 240
            A  +      ++I +   FSP+               K ++++   + +  +Y      
Sbjct: 349 SAQQKSKLDILNEIAYSICFSPDGAALLHLFLGILSQSKESHSSMAIQKLSCLYVTPANG 408

Query: 241 -------------LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                        L D  ++R   ++      +L+  FS +G   L S   D  + ++  
Sbjct: 409 TLLASGGADKFICLWDIILERQKFKLDGHSQAVLSVCFSPDG-MILASGSMDTTVILW-- 465

Query: 288 DLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D+++   +  L        S  +SP+ S +V  S  +   +L+ +Q + S  K       
Sbjct: 466 DIKTGNQKSNLIGHEESIYSVCFSPNGSTLV-SSSVDKSIRLWEIQISKSKSKV--SGNM 522

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGR 402
                  +S  G  +A         A+ +      QE+  L+  +SN+++  +SP GR
Sbjct: 523 RQSSQVCFSSDGFTLASVNEDN---AVILWNVKTGQEKANLVGHNSNVRSVCFSP-GR 576



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 49/116 (42%), Gaps = 18/116 (15%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSG 368
            + I   SD      + +  +      ++++ K  ++   V    +SP G+ +A      
Sbjct: 245 GTIIASGSD---DNSVRIWDAKTG---QLTKAKFNNHTGAVRSVCFSPDGNTLASGSCD- 297

Query: 369 EKFAIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             F++ ++       + +L    + +Q+  +SP+G++L  S     D   +L+ ++
Sbjct: 298 --FSMYLLDVKTGLKKSKLKAHTNWVQSLCFSPNGKTLASSSN---DNSIRLWDLN 348


>gi|310819403|ref|YP_003951761.1| protein kinase [Stigmatella aurantiaca DW4/3-1]
 gi|309392475|gb|ADO69934.1| Protein kinase [Stigmatella aurantiaca DW4/3-1]
          Length = 1156

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 107/310 (34%), Gaps = 34/310 (10%)

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                E RL+ V  + ++   K  +S        H I+ D+            + + FV 
Sbjct: 649 GGFSAEGRLFTVDIQGELHSWKPGTSER------HLIARDL---------GIGTSLAFVP 693

Query: 182 ESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            +    I      +  R+ A  +       + ++     + + + +A A+ D   +    
Sbjct: 694 GTPWVVIGTQEGVIRLRNHATGQMRELRQHEGLVNSLAVTSDGRYLASASADRTSV---- 749

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L +      P+ +   R      +FS + ++  ++   +  + ++S+  ++N   +L+  
Sbjct: 750 LWELETGE-PRVLRRARQQAHLVQFSPDDRQLAVA-SFNGQVRLFSM--ETNLHRKLSVG 805

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +S   S D  ++   S R     L ++ ++       +           +SP G  
Sbjct: 806 TAPQVSLELSSDGQRLASLSARG---DLRLLDASSGKVLLEAPGFVPDAM--AFSPDGQW 860

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +A     G +  +       +Q  LL   + + +  +S  G  L      D      L++
Sbjct: 861 LAAGGLDG-RVHVFAAATGSAQPVLLGHGARVTSVIFSRDGHRLA---TADEQGEVWLWA 916

Query: 421 IDLNGRNETL 430
              +G+   L
Sbjct: 917 PS-SGKGHRL 925



 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 76/241 (31%), Gaps = 16/241 (6%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E+G FN  +     +V     +  L  +D  G  +    P   +     R       +A+
Sbjct: 634 ERGAFN-VLKQARPTVGGFSAEGRLFTVDIQGE-LHSWKPGTSERHLIARDLGIGTSLAF 691

Query: 229 A----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
                         V  +        + +     ++ +   +S+G+    S   D    +
Sbjct: 692 VPGTPWVVIGTQEGVIRLRNHATGQMRELRQHEGLVNSLAVTSDGRYLA-SASADRTSVL 750

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +   L++     L           +SPD  Q+   S   G+ +L+ M+   ++  R    
Sbjct: 751 WE--LETGEPRVLRRARQQAHLVQFSPDDRQLAVASF-NGQVRLFSME---TNLHRKLSV 804

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             A       S  G  +A     G+   + ++     +  L        A  +SP G+ L
Sbjct: 805 GTAPQVSLELSSDGQRLASLSARGD---LRLLDASSGKVLLEAPGFVPDAMAFSPDGQWL 861

Query: 405 I 405
            
Sbjct: 862 A 862



 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 83/251 (33%), Gaps = 24/251 (9%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G +   + V      + + +       +    FS +  ++A A    E    V+L    
Sbjct: 863  AGGLDGRVHVFAAATGSAQPVLLGHGARVTSVIFSRDGHRLATADEQGE----VWLWAPS 918

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +   R+G     +    FS  G     S   D  + ++  D+ + +   L        
Sbjct: 919  SGK-GHRLGGQGVKVWQLAFSPGGGHIA-SAGDDGTVRLW--DVATGSFRTLAGHRGAVR 974

Query: 306  SASYSPD---SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            + ++SP       +V      G +   +     S Q            +  +SPQGD++A
Sbjct: 975  AVAFSPKPLKGDLLV----TGGMDHRVIFWELESGQNHSHTTSGGGVLELRYSPQGDVVA 1030

Query: 363  FTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                   +  +        +     +L   +++    +SP G  L  +     D  ++L+
Sbjct: 1031 SRDQKDGRVRLW--DGRTGEPHPIPVLTHQADVLGLAFSPDGTRLASASL---DKTARLW 1085

Query: 420  SIDLNGRNETL 430
             +   G +  L
Sbjct: 1086 DL-ATGESRAL 1095



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 72/216 (33%), Gaps = 31/216 (14%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G +   G D      RLWDV        +       + R +A                 F
Sbjct: 942  GHIASAGDDG---TVRLWDVATGS---FRTLAGHRGAVRAVA-----------------F 978

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            + + L     V  G+    +      G N  + T     +    R+SP    VA  + D 
Sbjct: 979  SPKPLKGDLLVTGGMDHRVIFWELESGQNHSHTTSGGGVLEL--RYSPQGDVVA--SRDQ 1034

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            +D           +  P  +   ++ +L   FS +G R   S   D+   ++  DL +  
Sbjct: 1035 KDGRVRLWDGRTGEPHPIPVLTHQADVLGLAFSPDGTRLA-SASLDKTARLW--DLATGE 1091

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            +  L        + ++ P+   +   + ++G  +L+
Sbjct: 1092 SRALRGHTGPVEAVAFFPEGKTLA-STGQDGSLRLW 1126


>gi|308051113|ref|YP_003914679.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ferrimonas balearica DSM 9799]
 gi|307633303|gb|ADN77605.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ferrimonas balearica DSM 9799]
          Length = 813

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 65/196 (33%), Gaps = 15/196 (7%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATE---RLTNTLF 302
           R  + + ++     A  +     + ++ ++  +  D +   VDL         RL +  +
Sbjct: 354 RTIRLMEDWGWNQSAMAWHPGEDKLVVMLEAADNKDRWIASVDLAKGKLRTEHRLHDDAW 413

Query: 303 IN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +N     +     ++ F S++ G   LY+    G     +S            S  G  +
Sbjct: 414 VNYTHNEFGWAGDKLYFLSEQSGYSNLYLKPLGGKADALVS--GRQVVSSLTLSNDGQHL 471

Query: 362 AFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSRKKDGDTGSK 417
            +        ++ +  +     Q   L +   +     SP  + L+  +S +       +
Sbjct: 472 YYKANPHHPGQYEVFRVALASGQVEQLTDLKGMLEYQLSPDEQQLLLEYSSR---TRPVE 528

Query: 418 LYSIDLNGRNETLINT 433
           LY   + G    L  T
Sbjct: 529 LYVQAIGGEARQLTQT 544



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 66/172 (38%), Gaps = 13/172 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPN-----QQKVAYATYDDEDILRVYLMDTR 245
               +   D A  +  T  R        ++ N       K+ + +   E      L    
Sbjct: 388 KDRWIASVDLAKGKLRTEHRLHDDAWVNYTHNEFGWAGDKLYFLS---EQSGYSNLYLKP 444

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFI 303
           +      + + R ++ +   S++G+              +++ V L S   E+LT+   +
Sbjct: 445 LGGKADALVSGRQVVSSLTLSNDGQHLYYKANPHHPGQYEVFRVALASGQVEQLTDLKGM 504

Query: 304 NISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +    SPD  Q++ E S R    +LYV Q+ G + ++++Q  + ++    W
Sbjct: 505 -LEYQLSPDEQQLLLEYSSRTRPVELYV-QAIGGEARQLTQTTKEAFLAYDW 554



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 53/147 (36%), Gaps = 7/147 (4%)

Query: 296 RLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-----RISQDKEASY 349
           RL      N SA ++ P   ++V   +    +  ++   + +  K     R+  D   +Y
Sbjct: 357 RLMEDWGWNQSAMAWHPGEDKLVVMLEAADNKDRWIASVDLAKGKLRTEHRLHDDAWVNY 416

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               +   GD + F         + +    G  + L+     + + T S  G+ L +   
Sbjct: 417 THNEFGWAGDKLYFLSEQSGYSNLYLKPLGGKADALVSGRQVVSSLTLSNDGQHLYYKAN 476

Query: 410 KDGDTGSKLYSIDL-NGRNETLINTPA 435
                  +++ + L +G+ E L +   
Sbjct: 477 PHHPGQYEVFRVALASGQVEQLTDLKG 503


>gi|71028560|ref|XP_763923.1| guanine nucleotide-binding protein [Theileria parva strain Muguga]
 gi|68350877|gb|EAN31640.1| guanine nucleotide-binding protein, putative [Theileria parva]
          Length = 331

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 80/230 (34%), Gaps = 14/230 (6%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGAN--IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
            +S S    ++   +   D DG     +       Q + +   S +       ++D    
Sbjct: 42  IISASRDKRLMIWEMFDEDVDGQVGVAKRALTGHSQTVQDVSMSSDGLFALSGSWDG--- 98

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L D     + +        + +  FS + ++  IS  +D+ + +++   +   T  
Sbjct: 99  -TLRLWDLVKACSVRVFNGHTKDVNSVAFSPDNRQI-ISGSRDKTIKLWNTLAECKYT-- 154

Query: 297 LTNTLFINISA--SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +TN+   +  +   +SP   + +F S     + + V        K      E   +    
Sbjct: 155 ITNSTHTDWVSCVRFSPSGKEPIFVSG-GWDKLIKVWDLRTCQLKHTLYGHEGVVYSVSI 213

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           SP G L A +        +  MK+  S   LL   S + A  +SP    L
Sbjct: 214 SPDGSLCA-SGGKDGVARLWDMKEANS-LHLLDAGSTINALCFSPCNYWL 261



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 91/252 (36%), Gaps = 32/252 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    +L + D   A    +     + +    FSP+ +++   + D      + L +T 
Sbjct: 93  SGSWDGTLRLWDLVKACSVRVFNGHTKDVNSVAFSPDNRQIISGSRDK----TIKLWNTL 148

Query: 246 ID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATER-LTNTLF 302
            + +           +   RFS +GK  +          +  V DL++   +  L     
Sbjct: 149 AECKYTITNSTHTDWVSCVRFSPSGKEPIFVS--GGWDKLIKVWDLRTCQLKHTLYGHEG 206

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +  S S SPD S       ++G  +L+ M+   S       D  ++     +SP    + 
Sbjct: 207 VVYSVSISPDGSLCA-SGGKDGVARLWDMKEANSLH---LLDAGSTINALCFSPCNYWL- 261

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ----------APTWSPSGRSLIFSRKKDG 412
               + +   I     D   + +L E +N +          +  WSP GR ++++   DG
Sbjct: 262 -CAATDKAIKIW----DLENKNILAEINNDRTKKVGLPWCVSLCWSPDGR-VLYAGSTDG 315

Query: 413 DTGSKLYSIDLN 424
                +Y +  N
Sbjct: 316 --NIYVYQVSRN 325



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 84/261 (32%), Gaps = 37/261 (14%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                   RLWD+     +  + F         +A   S D             +R +  
Sbjct: 93  SGSWDGTLRLWDLVKACSV--RVFNGHTKDVNSVA--FSPD-------------NRQIIS 135

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                +  + N+L        N    +   D +    RFSP+ ++  + +   + +++V+
Sbjct: 136 GSRDKTIKLWNTLAECKYTITN----STHTDWVSCV-RFSPSGKEPIFVSGGWDKLIKVW 190

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             D R  +    +     ++ +   S +G     S  KD    ++ +  ++N+   L   
Sbjct: 191 --DLRTCQLKHTLYGHEGVVYSVSISPDGSLCA-SGGKDGVARLWDM-KEANSLHLLDAG 246

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK------RISQDKEASYFDPVW 354
             IN    +SP +  +   +D+     + +      +        R  +          W
Sbjct: 247 STINA-LCFSPCNYWLCAATDKA----IKIWDLENKNILAEINNDRTKKVGLPWCVSLCW 301

Query: 355 SPQGDLIAFTKFSGEKFAIGV 375
           SP G ++      G  +   V
Sbjct: 302 SPDGRVLYAGSTDGNIYVYQV 322


>gi|310817474|ref|YP_003949832.1| wd-repeat containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|309390546|gb|ADO68005.1| WD-repeat protein [Stigmatella aurantiaca DW4/3-1]
          Length = 633

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 56/367 (15%), Positives = 125/367 (34%), Gaps = 44/367 (11%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSL----------GAQVLVTGRVIKEG----KD 122
               +++      +            WNS           G + +V+  V  +G      
Sbjct: 186 GRLRVVAVSEDGTRTVAAGEDGFVYVWNSRTGRLLKTLRGGERSIVSVAVSADGRWVLAG 245

Query: 123 RLRVEFRLWDVKDRKQI------------IGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
               + RLWD++  KQ+            +      + A        + D    S+  E 
Sbjct: 246 SEDAQARLWDLRTGKQVWSMEEEAIPIGAVALSGDGTRAVTSGKELQLWDLQQGSVLAES 305

Query: 171 GDFNSRILFVSESVVSGIIKNS-LCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
               S ++  +++          + +MD R G    +    +   +     SP+ ++   
Sbjct: 306 SSGPSPVVLSADNAFIAAGGYDAMWLMDTRSGHRFEFSLNGQMDAIAALVVSPDGKR--- 362

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--S 286
                     V L D     A +         +A  FS +G++ L S  +D  + ++   
Sbjct: 363 -AASSSQSASVRLWDMAGGTAQELASGREQPPMAVAFSQDGRKLL-SASRDGLVRLWDPR 420

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                    +L     + ++   SP     V  S  +G  +L+ ++    + +R  ++  
Sbjct: 421 EPSTGRTLVKLPPEPTVLVT---SPAGPYAV-LSGSDGALRLWNLEEE-KEVRRYGEEGG 475

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +Y+  V+S  G  +   +   E+  + V + +  Q+   +E S  +  +++ SG  +  
Sbjct: 476 PAYYPVVFSADGKRLFAAR---EEHGVDVWEVETGQQVKRLEPSGYEVTSFAASGEVVA- 531

Query: 407 SRKKDGD 413
           +  +DG 
Sbjct: 532 AGTRDGH 538



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 110/345 (31%), Gaps = 60/345 (17%)

Query: 109 QVLVTGRVIKEGKDRLRV----EFRLWDVKDRKQIIGKKFFSSPASWR------------ 152
           + +  G V   G     V    E +LWD++    +       SP                
Sbjct: 268 EAIPIGAVALSGDGTRAVTSGKELQLWDLQQGSVLAESSSGPSPVVLSADNAFIAAGGYD 327

Query: 153 -------KIAHTI-------SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
                  +  H          D I   +    G          +   S     S+ + D 
Sbjct: 328 AMWLMDTRSGHRFEFSLNGQMDAIAALVVSPDG----------KRAASSSQSASVRLWDM 377

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            G   + L   R+Q      FS + +K+  A+ D      V L D R     + +     
Sbjct: 378 AGGTAQELASGREQPPMAVAFSQDGRKLLSASRDG----LVRLWDPREPSTGRTLVKLPP 433

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIV 317
                  S  G  A++S   D A+ +++++ +     R             +S D  ++ 
Sbjct: 434 EPTVLVTSPAGPYAVLSGS-DGALRLWNLE-EEKEVRRYGEEGGPAYYPVVFSADGKRL- 490

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F +  E    ++ +++ G   KR+       Y    ++  G+++A     G    I + K
Sbjct: 491 FAAREEHGVDVWEVET-GQQVKRLEPSG---YEVTSFAASGEVVAAGTRDG---HIQLWK 543

Query: 378 KDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               +   RL   +  ++  + S  G+ ++       D   +L+ 
Sbjct: 544 AQTLEPLFRLSGHEYGIRTVSLSGDGKWVL---SVGEDWTVRLWD 585



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 55/341 (16%), Positives = 112/341 (32%), Gaps = 66/341 (19%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            +++D +D K++ G +     +  R IA +                 S +  +++     
Sbjct: 124 IQVFDTRDGKELHGLEGTQ-DSDLRAIALS--------------GEGSLLAAIADKGPP- 167

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                  + D                L     S +  +    T    +   VY+ ++R  
Sbjct: 168 ------WLWDLSRKPRVRKLRGAKGRLRVVAVSEDGTR----TVAAGEDGFVYVWNSRTG 217

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRAL------------------ISVQKDEAMDIYSVDL 289
           R  K +      I++   S++G+  L                  +   ++EA+ I +V L
Sbjct: 218 RLLKTLRGGERSIVSVAVSADGRWVLAGSEDAQARLWDLRTGKQVWSMEEEAIPIGAVAL 277

Query: 290 QSNATERLTNTLFIN--------ISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGS 336
             + T  +T+   +         + A  S   S +V  +D       G + +++M +   
Sbjct: 278 SGDGTRAVTSGKELQLWDLQQGSVLAESSSGPSPVVLSADNAFIAAGGYDAMWLMDTRSG 337

Query: 337 DQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--Q 393
            +   S + +       V SP G        S +  ++ +    G   + L         
Sbjct: 338 HRFEFSLNGQMDAIAALVVSPDGKR---AASSSQSASVRLWDMAGGTAQELASGREQPPM 394

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           A  +S  GR L+ S  +DG    +L+         TL+  P
Sbjct: 395 AVAFSQDGRKLL-SASRDG--LVRLWDPREPSTGRTLVKLP 432


>gi|296500992|ref|YP_003662692.1| acylamino-acid-releasing protein [Bacillus thuringiensis BMB171]
 gi|296322044|gb|ADH04972.1| acylamino-acid-releasing protein [Bacillus thuringiensis BMB171]
          Length = 654

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 96/293 (32%), Gaps = 45/293 (15%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++        +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 32  VAFVKKTADWKDNTYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDARCIAYLSPVGD 90

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQS-- 291
              ++++      R  + I + +  +   ++   GK      Q  E  +I    DL    
Sbjct: 91  GKNQIFVKSLDGYREVQ-ITDEKEGVSTFKWGPTGKGLYYVTQSKECEEIKKRKDLYGDF 149

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  +     +I I           V +SD +  +   V         +++  K+  
Sbjct: 150 QHIGKEHQNNCLYYIEIE---------KVIQSDTDEHKNRVVY--------QLTDGKDFH 192

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWSPSG 401
             +   S  G  + F               + ++     + + L V+     +  +SP G
Sbjct: 193 IHEFDISNDGKKVVFMATPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPDG 252

Query: 402 RSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
             + ++         R    D+  ++Y I+  G     +        P QW  
Sbjct: 253 SEICYTASIREKGYYRNHIQDSTLEIYDIN-TGELIQPLTDFDSTVMPLQWTA 304


>gi|288928314|ref|ZP_06422161.1| dipeptidyl aminopeptidase IV [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288331148|gb|EFC69732.1| dipeptidyl aminopeptidase IV [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 728

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 101/318 (31%), Gaps = 70/318 (22%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDEDILRV 239
           L V +  G + +        I++                +S + QK+A+   D   +   
Sbjct: 159 LYVCNAQGTHKQLTKDGSRDIVYGQSVHRDEFGIYKGTFWSNDGQKLAFYRMDQSMVADY 218

Query: 240 YLMDTRIDRAPKRIGNFRS-----------------------MILAP--------RFSSN 268
            L+D     A +    +                             P         +S +
Sbjct: 219 PLVDIDTRIATETPIRYPMAGEKSHLVTVGIYDLKTDKTVYLNTGDPTDRYFTNIAWSPD 278

Query: 269 GKRALIS----VQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSP-DSSQIVFE 319
           GK   +      Q   ++D Y     +      T +    +      ++ P D+S+ + +
Sbjct: 279 GKLIYLIELNRAQNHYSLDAYDATTGNKTATLYTESSDKYVHPMHAITFLPWDNSRFILQ 338

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAIGVMK 377
           S+++G   LY+  ++G   K+++  K        ++ +    +I  T+ S  +  +  + 
Sbjct: 339 SEKDGYNHLYLFDTSGKQIKQLTTGKWIVVDLMGFNAKTKEAIILSTEASPIQNNLYAVN 398

Query: 378 KDGSQERLL----------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                 RLL            +        SPSG+ ++     +      +  +++    
Sbjct: 399 LQTGARRLLDNGKGCHANTTGEGGSHKIALSPSGQWIL-DSYTEPTVPRNIDIVNVASAK 457

Query: 428 ETLINTPAYASDPQWVGF 445
            T   T   A +P W G+
Sbjct: 458 ATRYFT---ADNP-WKGY 471



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 62/207 (29%), Gaps = 22/207 (10%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + I +      S ++   +  +  D           D+      +SP+ + +     +  
Sbjct: 231 TPIRYPMAGEKSHLVTVGIYDLKTDKTVYLNTGDPTDRYFTNIAWSPDGKLI--YLIELN 288

Query: 235 DILRVYLMD----TRIDRAPKRIGNFRSMILAP----RFSS-NGKRALISVQKDEAMDIY 285
                Y +D    T  ++            + P     F   +  R ++  +KD    +Y
Sbjct: 289 RAQNHYSLDAYDATTGNKTATLYTESSDKYVHPMHAITFLPWDNSRFILQSEKDGYNHLY 348

Query: 286 SVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRIS 342
             D      ++LT   +I +    ++  + + +  S      +  LY +      ++ + 
Sbjct: 349 LFDTSGKQIKQLTTGKWIVVDLMGFNAKTKEAIILSTEASPIQNNLYAVNLQTGARRLLD 408

Query: 343 QD--------KEASYFDPVWSPQGDLI 361
                      E        SP G  I
Sbjct: 409 NGKGCHANTTGEGGSHKIALSPSGQWI 435


>gi|229125679|ref|ZP_04254709.1| Acylamino-acid-releasing enzyme [Bacillus cereus BDRD-Cer4]
 gi|228657732|gb|EEL13540.1| Acylamino-acid-releasing enzyme [Bacillus cereus BDRD-Cer4]
          Length = 688

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 96/293 (32%), Gaps = 45/293 (15%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++        +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 66  VAFVKKTADWKDNTYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDARCIAYLSPVGD 124

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQS-- 291
              ++++      R  + I + +  +   ++   GK      Q  E  +I    DL    
Sbjct: 125 GKNQIFVKSLDGYREVQ-ITDEKEGVSTFKWGPTGKGLYYVTQSKECEEIKKRKDLYGDF 183

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  +     +I I           V +SD +  +   V         +++  K+  
Sbjct: 184 QHIGKEHQNNCLYYIEIE---------KVIQSDTDEHKNRVVY--------QLTDGKDFH 226

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWSPSG 401
             +   S  G  + F               + ++     + + L V+     +  +SP G
Sbjct: 227 IHEFDISNDGKKVVFMATPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPDG 286

Query: 402 RSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
             + ++         R    D+  ++Y I+  G     +        P QW  
Sbjct: 287 SEICYTASIREKGYYRNHIQDSTLEIYDIN-TGELIQPLTDFDSTVMPLQWTA 338


>gi|229142967|ref|ZP_04271407.1| Acylamino-acid-releasing enzyme [Bacillus cereus BDRD-ST24]
 gi|228640464|gb|EEK96854.1| Acylamino-acid-releasing enzyme [Bacillus cereus BDRD-ST24]
          Length = 688

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 96/293 (32%), Gaps = 45/293 (15%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++        +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 66  VAFVKKTADWKDNTYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDARCIAYLSPVGD 124

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQS-- 291
              ++++      R  + I + +  +   ++   GK      Q  E  +I    DL    
Sbjct: 125 GKNQIFVKSLDGYREVQ-ITDEKEGVSTFKWGPTGKGLYYVTQSKECEEIKKRKDLYGDF 183

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  +     +I I           V +SD +  +   V         +++  K+  
Sbjct: 184 QHIGKEHQNNCLYYIEIE---------KVIQSDTDEHKNRVVY--------QLTDGKDFH 226

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWSPSG 401
             +   S  G  + F               + ++     + + L V+     +  +SP G
Sbjct: 227 IHEFDISNDGKKVVFMATPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPDG 286

Query: 402 RSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
             + ++         R    D+  ++Y I+  G     +        P QW  
Sbjct: 287 SEICYTASIREKGYYRNHIQDSTLEIYDIN-TGELIQPLTDFDSTVMPLQWTA 338


>gi|218193675|gb|EEC76102.1| hypothetical protein OsI_13357 [Oryza sativa Indica Group]
          Length = 357

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 79/216 (36%), Gaps = 19/216 (8%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +R       + +   +FSP+ + +A A+ D   +LRV+          +  G+    
Sbjct: 8   GYALRATLAGHRRAVSAVKFSPDGRLLASASAD--KLLRVWSTSDLASPVAELAGHGEG- 64

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINIS----ASYSP 311
           +    FS +G+    S   D  + I+ +            RL  TL  + +     ++SP
Sbjct: 65  VSDLAFSPDGRLIA-SASDDRTVRIWDLGDGGGGGGGGEPRLMKTLSGHTNYAFCLAFSP 123

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             + +   S     E + V +       R+            ++  G +I    + G   
Sbjct: 124 HGNMLASGSF---DETVRVWEVRSGRCLRVLPAHSEPVTSVDFNRDGAMIVSGSYDG-LC 179

Query: 372 AIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
            I      G   + L++D +  +    +SP+G+ ++
Sbjct: 180 RIW-DSATGHCIKTLIDDESPPVSFAKFSPNGKFVL 214



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 63/181 (34%), Gaps = 13/181 (7%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID-------RAP 250
            D A+         + + +  FSP+ + +A A+ D    +R++ +            R  
Sbjct: 49  SDLASPVAELAGHGEGVSDLAFSPDGRLIASASDD--RTVRIWDLGDGGGGGGGGEPRLM 106

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           K +    +      FS +G     S   DE + ++ V         L        S  ++
Sbjct: 107 KTLSGHTNYAFCLAFSPHGNMLA-SGSFDETVRVWEV-RSGRCLRVLPAHSEPVTSVDFN 164

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D + IV  S  +G  +++   + G   K +  D+        +SP G  +       + 
Sbjct: 165 RDGAMIVSGSY-DGLCRIWD-SATGHCIKTLIDDESPPVSFAKFSPNGKFVLAATLDSKL 222

Query: 371 F 371
           +
Sbjct: 223 Y 223



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 25/90 (27%), Gaps = 3/90 (3%)

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            + G   +        +     +SP G L+A                      L      
Sbjct: 5   DNPGYALRATLAGHRRAVSAVKFSPDGRLLASASADKLLRVWSTSDLASPVAELAGHGEG 64

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +    +SP GR +  +     D   +++ +
Sbjct: 65  VSDLAFSPDGRLIASASD---DRTVRIWDL 91


>gi|167625910|ref|YP_001676204.1| peptidase S9 prolyl oligopeptidase [Shewanella halifaxensis
           HAW-EB4]
 gi|167355932|gb|ABZ78545.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella halifaxensis HAW-EB4]
          Length = 685

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 59/144 (40%), Gaps = 18/144 (12%)

Query: 258 SMILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSP 311
             + +   S NGK+A+    + +        D++ V+++S  ++R+T T     S  +SP
Sbjct: 39  GSMGSVTLSPNGKQAVWLESRWDKELDKSQRDLWLVEIKSRQSKRMTFTNESESSPQWSP 98

Query: 312 DSSQIVFESDR---------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           D   + +              GK Q++ +  +  D + I+++ E        S  G  + 
Sbjct: 99  DGEYVYYLGKIKQEGAKAPFNGKTQVFRLSVSNGDSQPITKEAEG-VAGFELSHDGKSLY 157

Query: 363 F--TKFSGEKFAIGVMKKDGSQER 384
           F  TK + +K     M+   S  +
Sbjct: 158 FLATKTTTDKDQWASMRASHSAPQ 181



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 42/286 (14%), Positives = 81/286 (28%), Gaps = 65/286 (22%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SPN ++  +     +  L     D  +     R  KR+        +P++S +G+     
Sbjct: 47  SPNGKQAVWLESRWDKELDKSQRDLWLVEIKSRQSKRMTFTNESESSPQWSPDGEYVYYL 106

Query: 276 VQ---------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-------- 318
            +          +    ++ + + +  ++ +T           S D   + F        
Sbjct: 107 GKIKQEGAKAPFNGKTQVFRLSVSNGDSQPITKEAEGVAGFELSHDGKSLYFLATKTTTD 166

Query: 319 ----ESDREGKEQ------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                S R                 LY +      QK +  D +  +   V S  G  +A
Sbjct: 167 KDQWASMRASHSAPQYGHGEQKTNPLYQLDLEHFKQKLLLDDDKVVWEFKV-SQDGSKVA 225

Query: 363 FTKFSGEKF-------AIGVMKKDGSQERLLVED-SNLQAPTWSP----------SGRSL 404
               +  +         + +   +  +  +L +      AP  SP              L
Sbjct: 226 RITTTDNELVFLEGWSDVEIFDTNTQKNSVLADSQWRDNAP--SPYGWLLGLAWQDNSEL 283

Query: 405 IFSRKKDGDTGSKLYSID--LNGRNETLINTPAYA----SDPQWVG 444
            F    DG  G +L+  D     +    +  P       SD  W  
Sbjct: 284 AFRIDYDGHPG-QLFIADAKATDKPSLEVTRPGDVTLTSSDLTWRP 328



 Score = 37.3 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 7/67 (10%)

Query: 347 ASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSP 399
            S      SP G    + +          +  + +++    Q + +   +  ++ P WSP
Sbjct: 39  GSMGSVTLSPNGKQAVWLESRWDKELDKSQRDLWLVEIKSRQSKRMTFTNESESSPQWSP 98

Query: 400 SGRSLIF 406
            G  + +
Sbjct: 99  DGEYVYY 105


>gi|30018429|ref|NP_830060.1| acylamino-acid-releasing protein [Bacillus cereus ATCC 14579]
 gi|29893969|gb|AAP07261.1| Acylamino-acid-releasing enzyme [Bacillus cereus ATCC 14579]
          Length = 655

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 96/293 (32%), Gaps = 45/293 (15%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++        +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 33  VAFVKKTADWKDNTYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDARCIAYLSPVGD 91

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQS-- 291
              ++++      R  + I + +  +   ++   GK      Q  E  +I    DL    
Sbjct: 92  GKNQIFVKSLDGYREVQ-ITDEKEGVSTFKWGPTGKGLYYVTQSKECEEIKKRKDLYGDF 150

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  +     +I I           V +SD +  +   V         +++  K+  
Sbjct: 151 QHIGKEHQNNCLYYIEIE---------KVIQSDTDEHKNRVVY--------QLTDGKDFH 193

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWSPSG 401
             +   S  G  + F               + ++     + + L V+     +  +SP G
Sbjct: 194 IHEFDISNDGKKVVFMATPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPDG 253

Query: 402 RSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
             + ++         R    D+  ++Y I+  G     +        P QW  
Sbjct: 254 SEICYTASIREKGYYRNHIQDSTLEIYDIN-TGELIQPLTDFDSTVMPLQWTA 305


>gi|303276891|ref|XP_003057739.1| transcription factor TFIID with WD40 repeat [Micromonas pusilla
           CCMP1545]
 gi|226460396|gb|EEH57690.1| transcription factor TFIID with WD40 repeat [Micromonas pusilla
           CCMP1545]
          Length = 745

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 62/205 (30%), Gaps = 31/205 (15%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                +     SP  + +   + D    +R + M   +     R  N+   +   +++  
Sbjct: 482 GHSSAVHAVSLSPGNEFLLSCSRD--STVRAWSMQLEMPLCAYRSHNYP--VWDVKWAPT 537

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVF-ESDREGKE 326
           G     S   D+   ++++D+ +    R+      ++   ++ P+ + I    SDR    
Sbjct: 538 GHYFA-SASHDKTARVWAMDVAT--PRRIMVGHLADVDVVTWHPNCNYIATGSSDRT--- 591

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----------------K 370
            L +   +  +  RI             SP G  +A     G                  
Sbjct: 592 -LRLWDVSTGECVRIFTGHRGGIRSIAMSPDGKSMASGSDDGGILTWDLGSAKCERAFAG 650

Query: 371 FAIGVMKKD--GSQERLLVEDSNLQ 393
            A  V   D  G    LL      +
Sbjct: 651 HAGAVYSLDYAGGDATLLASGGADE 675



 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 90/306 (29%), Gaps = 39/306 (12%)

Query: 156 HTISDDIYQSITGEKGDFNS---RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           H +            G F     R+  +++SV  G  K      D D A+ + L      
Sbjct: 380 HLVCATTSSDAALVVGGFQDSVVRVWDMNKSVPGGTDKY-----DTDPASRKRLKRREAG 434

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-----GNFRSMILAPRFSS 267
               P    +        + ++       +  +  +    +         S + A   S 
Sbjct: 435 YDQLPDGDDDDDDDDDEEFKEKGGGGDGEIPAKGTKVATPLYCKEYIGHSSAVHAVSLSP 494

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            G   L+S  +D  +  +S+ L+        +  +      ++P        S  +   +
Sbjct: 495 -GNEFLLSCSRDSTVRAWSMQLE-MPLCAYRSHNYPVWDVKWAPTGHYFASASH-DKTAR 551

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLL 386
           ++ M       +RI     A      W P  + IA          + +      +  R+ 
Sbjct: 552 VWAMDVAT--PRRIMVGHLADVDVVTWHPNCNYIATGSSDRT---LRLWDVSTGECVRIF 606

Query: 387 V-EDSNLQAPTWSPSGRSLIFSRKKDG----------------DTGSKLYSIDLNGRNET 429
                 +++   SP G+S+       G                     +YS+D  G + T
Sbjct: 607 TGHRGGIRSIAMSPDGKSMASGSDDGGILTWDLGSAKCERAFAGHAGAVYSLDYAGGDAT 666

Query: 430 LINTPA 435
           L+ +  
Sbjct: 667 LLASGG 672


>gi|225557535|gb|EEH05821.1| WD domain-containing protein [Ajellomyces capsulatus G186AR]
          Length = 537

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 74/228 (32%), Gaps = 33/228 (14%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-----------------VYLMD 243
              +Y+       +   +FSP+   +A    D   +                   + + D
Sbjct: 157 YREKYVLKGHQLGVSTVKFSPDGSMIASCCKDRTRMNSSILCLWSNKLGAAADATIKIWD 216

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNT 300
           T   R         + I    +S +G     S   D+++ ++   + +        L + 
Sbjct: 217 TASGRLIHTFEGHLAGISTISWSPDGAIIA-SGSDDKSIRLW--HVSTGKPHPNPFLGHH 273

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +I  S ++SP  + +V  S     E +Y+     +   R                 G L
Sbjct: 274 NYI-YSVAFSPKGNMLVSGSY---DEAVYLWDVRSARVMRSLPAHSDPVAGVDIVRDGTL 329

Query: 361 IAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
           I      G    I +      Q  R LV + N  + A  +SP+G+ ++
Sbjct: 330 IVSCASDG---LIRIWDTGTGQCLRTLVHEDNPPVSAVKFSPNGKYVL 374



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 65/208 (31%), Gaps = 12/208 (5%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
             S   ++   NS IL +  + +      ++ + D     + +        +    +SP+
Sbjct: 182 IASCCKDRTRMNSSILCLWSNKLGAAADATIKIWDTASGRLIHTFEGHLAGISTISWSPD 241

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
              +A  + D      + L      +  P       + I +  FS  G   + S   DEA
Sbjct: 242 GAIIASGSDDK----SIRLWHVSTGKPHPNPFLGHHNYIYSVAFSPKGNMLV-SGSYDEA 296

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR- 340
           + ++ V   +     L              D + IV  +       + +  +      R 
Sbjct: 297 VYLWDV-RSARVMRSLPAHSDPVAGVDIVRDGTLIVSCAS---DGLIRIWDTGTGQCLRT 352

Query: 341 ISQDKEASYFDPVWSPQGDLI-AFTKFS 367
           +  +         +SP G  + A+T   
Sbjct: 353 LVHEDNPPVSAVKFSPNGKYVLAWTHDD 380



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 46/153 (30%), Gaps = 31/153 (20%)

Query: 309 YSPDSSQIV-FESDREGKE-----------------QLYVMQSNGSDQKRISQDKEASYF 350
           +SPD S I     DR                      + +  +         +   A   
Sbjct: 175 FSPDGSMIASCCKDRTRMNSSILCLWSNKLGAAADATIKIWDTASGRLIHTFEGHLAGIS 234

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFS 407
              WSP G +IA          I +      +      L   + + +  +SP G  L+  
Sbjct: 235 TISWSPDGAIIASGSDDKS---IRLWHVSTGKPHPNPFLGHHNYIYSVAFSPKGNMLV-- 289

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
               G     +Y  D+  R+  ++ +    SDP
Sbjct: 290 ---SGSYDEAVYLWDV--RSARVMRSLPAHSDP 317



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 54/167 (32%), Gaps = 29/167 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G +I  G D   +  RLW V   K          P     + H   + IY      KG  
Sbjct: 242 GAIIASGSDDKSI--RLWHVSTGK----------PHPNPFLGHH--NYIYSVAFSPKG-- 285

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     +VSG    ++ + D   A +    P+    +       +   +     D 
Sbjct: 286 --------NMLVSGSYDEAVYLWDVRSARVMRSLPAHSDPVAGVDIVRDGTLIVSCASDG 337

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKD 279
                + + DT   +  + + +  +  + A +FS NGK  L     D
Sbjct: 338 ----LIRIWDTGTGQCLRTLVHEDNPPVSAVKFSPNGKYVLAWTHDD 380


>gi|224076729|ref|XP_002196965.1| PREDICTED: WD repeat and SOCS box-containing 1 [Taeniopygia
           guttata]
          Length = 359

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 65/180 (36%), Gaps = 15/180 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 177 RIKIWDAYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 236

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                     ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 237 RGHPNWVYGCAFSPDSSILC---SVGASKAVFLWDMDKYSMLRKLEGHHNDVVACEFSPD 293

Query: 358 GDLIAFTKFSGEKF----AIGVMKKD-GSQERLLV-------EDSNLQAPTWSPSGRSLI 405
           G L+A   +    +     IGV+ ++ G               D  +++  +S  G  + 
Sbjct: 294 GALLATASYDTRVYVWDPHIGVILREFGHLFPPPTPIFAGGANDRWVRSVCFSHDGLHVA 353



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 6/102 (5%)

Query: 185 VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VS     +L V D +D  N+  +       ++   FSP+   +            V+L D
Sbjct: 213 VSASRDKTLRVWDLKDDGNMMKVLRGHPNWVYGCAFSPDSSILCSV----GASKAVFLWD 268

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                  +++    + ++A  FS +G     +   D  + ++
Sbjct: 269 MDKYSMLRKLEGHHNDVVACEFSPDGALLA-TASYDTRVYVW 309



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 4/99 (4%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +  +          D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 175 NGRIKIWDAYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 234

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +L    N      +SP   S++ S          L+ +D
Sbjct: 235 VLRGHPNWVYGCAFSPDS-SILCS--VGASKAVFLWDMD 270


>gi|312130013|ref|YP_003997353.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311906559|gb|ADQ17000.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 622

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 78/234 (33%), Gaps = 34/234 (14%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYL--MDTRIDRAPKRIG---NFRSMILAPRFSSNG 269
           + P  + +   + +      +   ++L   +      PK I    N  +       S++G
Sbjct: 170 YFPVLTADGNTLVFTAITSNEDEDLFLSFKENGQWTTPKPISSIINTPNNEGTCTISADG 229

Query: 270 KRALISVQKD----EAMDIYSVDLQS---NATERLT---NTLFINISASYSPDSSQIVFE 319
           K  + +  +      + D++    +       + L    N+ + +   S SPD S++ F 
Sbjct: 230 KIMVFTSCEGRNSYGSCDLFITRKEGDTWTEPQNLGPNVNSPYWDSQPSLSPDGSRLFFS 289

Query: 320 SDRE---GKEQLYVMQSNG-SDQKRISQDKEA-----SYFDPVWSPQGDLIAFTKFSG-- 368
           SDR    GK+ +++   +      + +          +   P     G  + ++      
Sbjct: 290 SDRPFGVGKKDIWMSAVDEQGKWSKATNLGPGINTPENEVSPFVHANGSSLFYSSNGREG 349

Query: 369 -EKFAIGVMKKDGSQE-------RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                I +       +         +    +      S  G+S ++S+++  +T
Sbjct: 350 LGNHDIYMTNIQEGFKSESINLGYPINTPGDESGLFISADGKSALYSKQEGDNT 403



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 66/185 (35%), Gaps = 26/185 (14%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ----KRIS 342
           ++++      + N          + D + +VF +    +++   +    + Q    K IS
Sbjct: 152 LNIKPIKLPSVINARERQYFPVLTADGNTLVFTAITSNEDEDLFLSFKENGQWTTPKPIS 211

Query: 343 Q--DKEASYFDPVWSPQGDLIAFTKFSGEKF----AIGVMKKDG---SQERLLVEDSNLQ 393
              +   +      S  G ++ FT   G        + + +K+G   ++ + L    N+ 
Sbjct: 212 SIINTPNNEGTCTISADGKIMVFTSCEGRNSYGSCDLFITRKEGDTWTEPQNL--GPNVN 269

Query: 394 APTW------SPSGRSLIFSRKKD-GDTGSKLYS--IDLNGRNETLINTPAYASDPQW-- 442
           +P W      SP G  L FS  +  G     ++   +D  G+     N     + P+   
Sbjct: 270 SPYWDSQPSLSPDGSRLFFSSDRPFGVGKKDIWMSAVDEQGKWSKATNLGPGINTPENEV 329

Query: 443 VGFMD 447
             F+ 
Sbjct: 330 SPFVH 334



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/306 (13%), Positives = 93/306 (30%), Gaps = 40/306 (13%)

Query: 48  VSIAFTKFVSIDELGGKVSEVVS-KDLQRSDVFNLISQDSF-KQKITNPDSIPRFQDWNS 105
           ++IA        +   ++   +   DL    + N ++        + N      F    +
Sbjct: 117 LNIALRNTQKNTKAYEQIQRQIRRADLGIKAMENPLNIKPIKLPSVINARERQYFPVLTA 176

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
            G   LV   +     + L + F+               +++P     I +T ++   + 
Sbjct: 177 DG-NTLVFTAITSNEDEDLFLSFK-----------ENGQWTTPKPISSIINTPNN---EG 221

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILF--EPRFS 220
                 D    ++F S    +      L +  ++G      + L P+ +   +  +P  S
Sbjct: 222 TCTISADGKI-MVFTSCEGRNSYGSCDLFITRKEGDTWTEPQNLGPNVNSPYWDSQPSLS 280

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPK--------RIGNFRSMILAPRFSSNGKRA 272
           P+  ++ +++     + +  +  + +D   K           N     ++P   +NG   
Sbjct: 281 PDGSRLFFSSDRPFGVGKKDIWMSAVDEQGKWSKATNLGPGINTPENEVSPFVHANGSSL 340

Query: 273 LISVQKD---EAMDIYSVDLQSN------ATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S          DIY  ++Q              NT         S D    ++     
Sbjct: 341 FYSSNGREGLGNHDIYMTNIQEGFKSESINLGYPINTPGDESGLFISADGKSALYSKQEG 400

Query: 324 GKEQLY 329
               +Y
Sbjct: 401 DNTYIY 406


>gi|229107846|ref|ZP_04237481.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock1-15]
 gi|228675611|gb|EEL30820.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock1-15]
          Length = 654

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 97/293 (33%), Gaps = 45/293 (15%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++        +N + + ++D     Y + + D     P +SP+ + +AY +   +
Sbjct: 32  VAFVKKTADWKDNTYRNHVWIYEKD-KKQSYPSSNGDIDSTHPLWSPDARCIAYLSPVGD 90

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQS-- 291
              ++++      R  + I + +  +   ++   GK      Q  E  +I    DL    
Sbjct: 91  GKNQIFVKSLDGYREVQ-ITDEKEGVSTFKWGPTGKGLYYVTQSKECEEIKKRKDLYGDF 149

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  +     +I I           V +SD +  +   V         +++  K+  
Sbjct: 150 QHIGKEHQNNCLYYIEIE---------KVIQSDTDEHKNRVVY--------QLTDGKDFH 192

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWSPSG 401
             +   S  G  + F               + ++     + + L V+     +  +SP G
Sbjct: 193 IHEFDISNDGKKVVFMATPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPDG 252

Query: 402 RSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
             + ++         R    D+  ++Y I+  G     +        P QW  
Sbjct: 253 SEICYTASIREKGYYRNHIQDSTLEIYDIN-TGELIQPLTDFDSTVMPLQWTA 304


>gi|154492217|ref|ZP_02031843.1| hypothetical protein PARMER_01851 [Parabacteroides merdae ATCC
           43184]
 gi|154087442|gb|EDN86487.1| hypothetical protein PARMER_01851 [Parabacteroides merdae ATCC
           43184]
          Length = 830

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 69/222 (31%), Gaps = 39/222 (17%)

Query: 218 RFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             SP+ + V   Y T  +      Y    R     + +   +  IL   +     +   +
Sbjct: 196 SVSPDGKYVLVKYYTRMEGGKSEQYAQ-LRDAATGRILLQDKGFILTADWMPTSSKMYFT 254

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG----------- 324
                  ++ +VD  +   E L   L    S S++PD   +++    EG           
Sbjct: 255 RTGMNGKELVTVDPATMQEEILAENL-PEGSFSFTPDEKTLLYTIQEEGPKDGPDMLRIL 313

Query: 325 -----------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--------- 364
                      +  ++         ++++     ++ + V S     + F+         
Sbjct: 314 EPNDRLPGFRNRYLIWRYDLQTGLYEQLTYGHNNTFINDV-SADSRYLLFSTNEQDYTSL 372

Query: 365 -KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              S   + + +     + + L      +   T+SP G+ L+
Sbjct: 373 PHSSNSMYKLDLQSM--AVDTLWERAKYINGATFSPDGKRLM 412



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/373 (12%), Positives = 112/373 (30%), Gaps = 83/373 (22%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            ++     +    +     +L D    + ++  K F   A W                  
Sbjct: 203 YVLVKYYTRMEGGKSEQYAQLRDAATGRILLQDKGFILTADW------------------ 244

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
                S  ++ + + ++G       ++  D A ++    + +       F+P+++ + Y 
Sbjct: 245 --MPTSSKMYFTRTGMNGKE-----LVTVDPATMQEEILAENLPEGSFSFTPDEKTLLYT 297

Query: 230 TY---------------------DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                                     +   ++  D +     +++    +       S++
Sbjct: 298 IQEEGPKDGPDMLRILEPNDRLPGFRNRYLIWRYDLQTGLY-EQLTYGHNNTFINDVSAD 356

Query: 269 GKRALISVQKDEAMDI-------YSVDLQSNAT-ERLTNTLFINISASYSPDSSQ-IVFE 319
            +  L S  + +   +       Y +DLQS A         +IN  A++SPD  + +VF 
Sbjct: 357 SRYLLFSTNEQDYTSLPHSSNSMYKLDLQSMAVDTLWERAKYIN-GATFSPDGKRLMVFG 415

Query: 320 S----------------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           S                      QL++        K +++D   +     W+     I  
Sbjct: 416 SGNAFDNIGLNIKEGQISNTYDGQLFLYDPATRKAKALTKDFNPNVTSAQWNKFDGQIYM 475

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS-----PSGRSLIFSRKKDGDTGSKL 418
                +   +        + R L +        +S     P    +++   +     ++L
Sbjct: 476 LTEDQDYQRVYTCNPANGKIRRL-DLPEDVIYNYSLAEAAP----VMYYYGQSVSNANRL 530

Query: 419 YSIDLNGRNETLI 431
           YS +   +   LI
Sbjct: 531 YSYNTKSKKTQLI 543



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 97/317 (30%), Gaps = 65/317 (20%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + + + V         K+      RD A  R L   +  IL    + P   K+ +     
Sbjct: 200 DGKYVLVKYYTRMEGGKSEQYAQLRDAATGRILLQDKGFILTA-DWMPTSSKMYFTRTGM 258

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---------- 283
            +   +  +D    +      N      +  F+ + K  L ++Q++   D          
Sbjct: 259 -NGKELVTVDPATMQEEILAENLPEGSFS--FTPDEKTLLYTIQEEGPKDGPDMLRILEP 315

Query: 284 ------------IYSVDLQSNATERLT---NTLFINISASYSPDSSQIVF-------ESD 321
                       I+  DLQ+   E+LT   N  FIN     S DS  ++F        S 
Sbjct: 316 NDRLPGFRNRYLIWRYDLQTGLYEQLTYGHNNTFIND---VSADSRYLLFSTNEQDYTSL 372

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---------- 371
                 +Y +         +  ++        +SP G  +     SG  F          
Sbjct: 373 PHSSNSMYKLDLQSMAVDTL-WERAKYINGATFSPDGKRL-MVFGSGNAFDNIGLNIKEG 430

Query: 372 --------AIGVMKKDGSQERLLVEDSNLQAPT--WSP-SGRSLIFSRKKDGDTGSKLYS 420
                    + +      + + L +D N    +  W+   G+  + +  +D     ++Y+
Sbjct: 431 QISNTYDGQLFLYDPATRKAKALTKDFNPNVTSAQWNKFDGQIYMLTEDQD---YQRVYT 487

Query: 421 IDLNGRNETLINTPAYA 437
            +        ++ P   
Sbjct: 488 CNPANGKIRRLDLPEDV 504



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 44/109 (40%), Gaps = 4/109 (3%)

Query: 308 SYSPDSSQI---VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S SPD   +    +     GK + Y    + +   RI    +       W P    + FT
Sbjct: 196 SVSPDGKYVLVKYYTRMEGGKSEQYAQLRD-AATGRILLQDKGFILTADWMPTSSKMYFT 254

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +       +  +     QE +L E+    + +++P  ++L+++ +++G 
Sbjct: 255 RTGMNGKELVTVDPATMQEEILAENLPEGSFSFTPDEKTLLYTIQEEGP 303


>gi|169403953|ref|NP_998264.1| WD repeat-containing protein 5 [Danio rerio]
 gi|30353827|gb|AAH52124.1| Wdr5 protein [Danio rerio]
 gi|44890310|gb|AAH66729.1| Wdr5 protein [Danio rerio]
          Length = 334

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSP+ + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YTLKFTLAGHTKAVSSVKFSPSGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 148 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 202

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|171915051|ref|ZP_02930521.1| peptidase C14, caspase catalytic subunit p20 [Verrucomicrobium
            spinosum DSM 4136]
          Length = 1911

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 75/234 (32%), Gaps = 28/234 (11%)

Query: 192  SLCVMDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            ++ + D  G            + +    FSP+  ++  ++ D   + R++   T      
Sbjct: 850  TVYLWDPSGITPATPQQLPHPEKVRHLAFSPDGSRLITSSVD--GLARIW---TLGGANQ 904

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASY 309
              +         P+FS +G + L              D  +     +  +       A +
Sbjct: 905  VNLTVPHQAEFLPQFSPDGTKILAGSSP---KSASLFDAATGKPCSQPMSHQGAVTHAYF 961

Query: 310  SPDSSQIV---------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +PD ++++           SD      + +  S     +  S  +  +    + S  GD 
Sbjct: 962  NPDGTRVLTASGCNPSETSSDPVCDNTIRIWDSLSGKAEG-SPLRHDNVTQVILSTDGDF 1020

Query: 361  IAFTKFSGEKFAIG------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            I     S EK  +       ++    + + +    S+ +  ++ P G S   + 
Sbjct: 1021 IL--SVSAEKVQVWDVERQTLVTPAINLQPVFSHTSSTRFASFHPDGFSFATAS 1072



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 102/319 (31%), Gaps = 56/319 (17%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            ++WDV+ +  +       +       +HT S       T           F + S     
Sbjct: 1030 QVWDVERQTLV-----TPAINLQPVFSHTSS-------TRFASFHPDGFSFATASGNRHA 1077

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            I   +      G+ +          ++   FSP+ Q++   T  D   L ++  DT    
Sbjct: 1078 ILKDIFTGKAIGSPL-----YHQGSVYLTLFSPDGQRLL--TGSDGGGLLLWHPDTGAPS 1130

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV------DLQSNAT--ERLTNT 300
                           +FS +G+  L      ++    +V      DL +       L   
Sbjct: 1131 GECL---DPGPADHVQFSPDGRYLLAIDNTVDSARPNTVGTARWWDLATRQPAAPPLVCR 1187

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              I + A +SPDS +++  S   G  Q+Y  ++        S       +   +SP G L
Sbjct: 1188 API-LGADFSPDSQRLLIVS--GGGVQVY--RTASGAPASPSIFSPLPIWCARFSPDGHL 1242

Query: 361  IAFTKFS------------------GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            IA                         +  +          R L  +  + +  +SP G 
Sbjct: 1243 IATGSAPVRPRPASYAEINVSSNPLRGEARLWRSATGRQTGRTLHHEGPVNSLLFSPDGT 1302

Query: 403  SLIFSRKKDGDTGSKLYSI 421
             L+ + +   D  S+++S+
Sbjct: 1303 RLLTASQ---DKTSRIWSV 1318



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 76/284 (26%), Gaps = 34/284 (11%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             R+WD    K        +  +  R       D++ Q I    GDF   +      V   
Sbjct: 989  IRIWDSLSGK--------AEGSPLRH------DNVTQVILSTDGDFILSVSAEKVQVWDV 1034

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              +  +        N++ +        F   F P+     ++           L D    
Sbjct: 1035 ERQTLVTPAI----NLQPVFSHTSSTRFA-SFHPDG----FSFATASGNRHAILKDIFTG 1085

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            +A       +  +    FS +G+R L +      + ++  D  + + E L      ++  
Sbjct: 1086 KAIGSPLYHQGSVYLTLFSPDGQRLL-TGSDGGGLLLWHPDTGAPSGECLDPGPADHVQ- 1143

Query: 308  SYSPDSSQIVFE-----SDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +SPD   ++       S R                         A      +SP    +
Sbjct: 1144 -FSPDGRYLLAIDNTVDSARPNTVGTARWWDLATRQPAAPPLVCRAPILGADFSPDSQRL 1202

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  G    +            +     +    +SP G  + 
Sbjct: 1203 LIVS--GGGVQVYRTASGAPASPSIFSPLPIWCARFSPDGHLIA 1244



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 65/182 (35%), Gaps = 24/182 (13%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKDEAMDIYSVDLQS 291
            +D +   L+   ++  P          ++   FS +G + L        +         
Sbjct: 761 HQDAVLRLLLAPTVNALPATTPALPGKWISHAEFSRDGSQILTCAGSSVNLW------DG 814

Query: 292 NATERLTNTLFINISASY---SP-DSSQIVFESDREGKEQLYVMQSNG---SDQKRISQD 344
           +  + L   L +   A++   SP  ++ I   +D    + +Y+   +G   +  +++   
Sbjct: 815 HTLKALVAPLTLPAEATFAAISPAKTTLIAIVAD----QTVYLWDPSGITPATPQQLPHP 870

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRS 403
           ++  +    +SP G  +  +   G      +    G+ +  L      +  P +SP G  
Sbjct: 871 EKVRHL--AFSPDGSRLITSSVDGLA---RIWTLGGANQVNLTVPHQAEFLPQFSPDGTK 925

Query: 404 LI 405
           ++
Sbjct: 926 IL 927



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 16/86 (18%)

Query: 218  RFSPNQQKVAYATYDDEDILRVY---------------LMDTRIDRAPKRIGNFRSMILA 262
            RFSP+   +A  +         Y               L  +   R   R  +    + +
Sbjct: 1235 RFSPDGHLIATGSAPVRPRPASYAEINVSSNPLRGEARLWRSATGRQTGRTLHHEGPVNS 1294

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVD 288
              FS +G R L +  +D+   I+SV 
Sbjct: 1295 LLFSPDGTRLL-TASQDKTSRIWSVP 1319


>gi|75906511|ref|YP_320807.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75700236|gb|ABA19912.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 386

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 16/188 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP    +A  + + E      ++  +              +    FS +GK   +  Q
Sbjct: 60  AWSPQGNTLAATSANGE------VVLWQDGELTTLQAGNGQSVDCLAFSPDGKFLAVGGQ 113

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + I+    +      L N        ++S  S+Q+ F   R     + V  ++  +
Sbjct: 114 -DGRVKIWQ---EQELIATLENAPAWVDKLAWSHTSNQLAFSLGR----YVQVWDADTRE 165

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                   ++S     W   G  +A     G    I   +    +  +L   +      W
Sbjct: 166 VVTTLNFADSSPLSIDWRIDGQYLAIGGNKG--IKIWHAQDWDEEPYILNMPTVSVTMAW 223

Query: 398 SPSGRSLI 405
           SP G+ L 
Sbjct: 224 SPDGKFLA 231



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 66/191 (34%), Gaps = 27/191 (14%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVF 318
           + A  +S  G     +   +  + ++    Q      L      ++   ++SPD   +  
Sbjct: 56  VTAIAWSPQGNTLA-ATSANGEVVLW----QDGELTTLQAGNGQSVDCLAFSPDGKFLA- 109

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVM 376
              ++G+ +++       +Q+ I+  + A  +     WS   + +AF+        + V 
Sbjct: 110 VGGQDGRVKIW------QEQELIATLENAPAWVDKLAWSHTSNQLAFSLGR----YVQVW 159

Query: 377 KKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             D  +  +   +    +P    W   G+ L       G+ G K++          ++N 
Sbjct: 160 DADTREV-VTTLNFADSSPLSIDWRIDGQYLA----IGGNKGIKIWHAQDWDEEPYILNM 214

Query: 434 PAYASDPQWVG 444
           P  +    W  
Sbjct: 215 PTVSVTMAWSP 225



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 69/227 (30%), Gaps = 29/227 (12%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             + V D D   +       D       +  + Q +A           + +   +     
Sbjct: 154 RYVQVWDADTREVVTTLNFADSSPLSIDWRIDGQYLA-----IGGNKGIKIWHAQDWDEE 208

Query: 251 KRIGNFRSMILAPRFSSNGKRAL-------ISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
             I N  ++ +   +S +GK          ++V +    D + +        +L  +   
Sbjct: 209 PYILNMPTVSVTMAWSPDGKFLASGNMDRSVTVLEWNNPDPWVMRGFPGKIRQLAWSEAT 268

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVM----QSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 +   + I+  S  EG   + V       N   + R+  +         ++P+  
Sbjct: 269 ------TKLGAPILASSSVEG---IVVWEKLEDENLGWEARVLTNHVGVINAIAFAPKSF 319

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
           L+A     G    + +  K     ++L   ++      W P G+ + 
Sbjct: 320 LLASAATDGW---LCLWNKAKEVSQILTGVADGFSTLAWHPQGKLIA 363


>gi|288916826|ref|ZP_06411199.1| WD-40 repeat protein [Frankia sp. EUN1f]
 gi|288351711|gb|EFC85915.1| WD-40 repeat protein [Frankia sp. EUN1f]
          Length = 682

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/289 (13%), Positives = 83/289 (28%), Gaps = 54/289 (18%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + VSG     + V D  G+  +         +     +P+ ++V            V L
Sbjct: 245 RTGVSGGYDGLVRVWDLAGSREQASLSGHHGAVLAVALTPDGRQVV----SGGADGVVRL 300

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
            D         +      + A   + +G+R +++   D  + I+   L++   +  +   
Sbjct: 301 WDLADGTERAALTGHTGEVSAVALTPDGRR-VVTGGGDGMLRIWE--LETGEEQAHIPPG 357

Query: 301 --LFINISAS----------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                + +             +PD        D  G  +++     G  +          
Sbjct: 358 EIPATSRAPFLGPDRMSALAVAPDGRWAA-SGDLSGALRIW--DLAGGRRLGCLTSDGVP 414

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN----------------- 391
            +    +P G  I      G    +     D  + R   ED +                 
Sbjct: 415 VWAVAVTPDGRRIVTGHGDGTV-RLWERNPDWDRNRDAGEDRDAAREQTRLRRRRALWER 473

Query: 392 --------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                   + A   +P G+ ++      GD    ++  DL+G  +  + 
Sbjct: 474 LFPGRETAVTAVAVTPDGQRIVC-----GDLDGTVWVADLDGDRQRRLG 517



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 72/259 (27%), Gaps = 43/259 (16%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD------------- 232
           SG +  +L + D  G        S    ++    +P+ +++     D             
Sbjct: 387 SGDLSGALRIWDLAGGRRLGCLTSDGVPVWAVAVTPDGRRIVTGHGDGTVRLWERNPDWD 446

Query: 233 -------DEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQKDEAMDI 284
                  D D  R      R     +R+   R + + A   + +G+R +     D    +
Sbjct: 447 RNRDAGEDRDAAREQTRLRRRRALWERLFPGRETAVTAVAVTPDGQRIVC---GDLDGTV 503

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY--------VMQSNGS 336
           +  DL  +   RL        + + +PD  Q V     +G  +L+               
Sbjct: 504 WVADLDGDRQRRLGRHRNWASAVAVTPDGRQAV-SGGGDGTVRLWDLARARGRGRGRGRG 562

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIA--------FTKFSGEKFAIGVMK-KDGSQERLLV 387
             +               SP G  I           +  G    I +     G Q   L 
Sbjct: 563 RGQARLTGHVGDVRAVAVSPDGSQIVSCGGAGGPVVRTLGGDGTIRIWDRASGRQLACLT 622

Query: 388 -EDSNLQAPTWSPSGRSLI 405
                +     +P    ++
Sbjct: 623 GHTHGVTGVAITPDAAEIV 641



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 43/283 (15%), Positives = 88/283 (31%), Gaps = 36/283 (12%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             VVS   +  + V D D    + LT      +     +P+   +  +   D  +L++  
Sbjct: 104 RRVVSAGWRGPIHVSDLDSG--QLLTTIGVASVLGLALTPDGTHLVISQIADGWVLQIND 161

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE---RLT 298
           + T    A     +   +      + +G + +     D  + ++  DL +   +     T
Sbjct: 162 LATGRRVAEHAFESLGRL----ALTPDGAQMV-GGCADGMVRVW--DLATGREQACLYPT 214

Query: 299 NTLFINISASYSPDS-------SQIVFESD-REGKEQLY-----VMQSNGSDQKRISQDK 345
                    +   D        + +V  +D R G    Y     V    GS ++      
Sbjct: 215 RH-AEGTEGTEDSDRAPGLTAMTSLVLTTDGRTGVSGGYDGLVRVWDLAGSREQASLSGH 273

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRS 403
             +      +P G  +      G    + +       ER  L      + A   +P GR 
Sbjct: 274 HGAVLAVALTPDGRQVV---SGGADGVVRLWDLADGTERAALTGHTGEVSAVALTPDGRR 330

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           ++      GD   +++ ++  G  +  I  P          F+
Sbjct: 331 VV---TGGGDGMLRIWELE-TGEEQAHIP-PGEIPATSRAPFL 368



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 58/161 (36%), Gaps = 20/161 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDR 322
             + +G+  + + + D+ + I+  D  +     RLT      ++ + +PD  Q       
Sbjct: 2   AVTPDGRSVISAGRDDDTVRIW--DRSTGRERLRLTIGGSSVMALAVTPDGRQ---VVGG 56

Query: 323 EGKEQLYVMQSNGSDQKR-----ISQDKEASYF------DPVWSPQGDLIAFTKFSGEKF 371
            G   + +   +   Q+      + +  + S          V +P G  +    + G   
Sbjct: 57  GGDGTVRIWDLDTGRQRASVTHWLEKPSDGSAGLVDEVSAVVVTPDGRRVVSAGWRG--- 113

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            I V   D  Q    +  +++     +P G  L+ S+  DG
Sbjct: 114 PIHVSDLDSGQLLTTIGVASVLGLALTPDGTHLVISQIADG 154


>gi|258648518|ref|ZP_05735987.1| putative alanyl dipeptidyl peptidase [Prevotella tannerae ATCC
           51259]
 gi|260851285|gb|EEX71154.1| putative alanyl dipeptidyl peptidase [Prevotella tannerae ATCC
           51259]
          Length = 832

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 81/273 (29%), Gaps = 54/273 (19%)

Query: 210 RDQILFEP-----RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           RD ++  P       SPN + +AY+    +            D   +++ N  +     R
Sbjct: 174 RDDMILGPHPNYLSISPNGRYLAYSIVTVKKDGTSVYETFIKDVKSQKVLNRYNAYTDVR 233

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDRE 323
           +         + ++     +Y+ D  +     L     I   S   SP    +V+  + +
Sbjct: 234 WLPKADIMYGTREETGGRVLYTFDPATQQESVL--ASGIPTGSFEISPQRDYLVYRVEED 291

Query: 324 G----------------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           G                      ++ L+          R++  KE S      S  G  +
Sbjct: 292 GQSYENGIKRIFQPDDRMPGWRKRQSLFRYDLKTGTMARLTFGKE-SVGLEDISSDGRRL 350

Query: 362 AF-------TKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKK--- 410
                    T+    +  I  +    ++   +  ++   ++ ++SP  + ++        
Sbjct: 351 LLLYDRFEATQRPFNRKVILTLDLSTNKVDTIYNNATFVESCSFSPDDKQILIKASPAAF 410

Query: 411 ------------DGDTGSKLYSIDLNGRNETLI 431
                             +LY +DL  +    I
Sbjct: 411 DGIGSEVKPDQFPNSFDYRLYLLDLATKQVRPI 443


>gi|308809675|ref|XP_003082147.1| Tricorn protease homolog (ISS) [Ostreococcus tauri]
 gi|116060614|emb|CAL55950.1| Tricorn protease homolog (ISS) [Ostreococcus tauri]
          Length = 1467

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLI 405
             +   WSP G  +A+ K     F +I V++       R+     N  +P +SP G  L 
Sbjct: 722 GVYGLSWSPDGSWLAYAKDEENDFTSIHVLELSTGDSTRITTPSYNAHSPRFSPDGLYLY 781

Query: 406 FSRKKD 411
           +   + 
Sbjct: 782 YFSDQQ 787



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 264 RFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            +S +G     +  ++++   I+ ++L +  + R+T   +   S  +SPD   + + SD+
Sbjct: 727 SWSPDGSWLAYAKDEENDFTSIHVLELSTGDSTRITTPSYNAHSPRFSPDGLYLYYFSDQ 786

Query: 323 E 323
           +
Sbjct: 787 Q 787



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 60/204 (29%), Gaps = 22/204 (10%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                R+ +  S    P+ S +G          +  D++    +    E++T        
Sbjct: 209 GGIASRLSSTYSREGVPKLSPDGVYVAFLGLTYDGYDVFVAPTKGGVVEQITFGGKAQDV 268

Query: 307 ASYSPDSS----QIVFESDREGKEQLYVMQSNGSDQKRISQDK-----EASYFDPVWSPQ 357
           AS+            F S      QL  +  +      +   K     +       + P 
Sbjct: 269 ASWPSKDELLVISSAFSSSM--NAQLVRVNPSTRKASPLPFAKAVEGVKDGLGCYAFVPL 326

Query: 358 GDLIAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-------SLIFSR 408
                  ++ G +    + +++ D    +L  E +      WSP           L F  
Sbjct: 327 RQTSETKRYEGGEHIATLAMVQGDSEATQLTPESTWGLRGAWSPESSNDAELKDHLFFIS 386

Query: 409 KKDGDTGSKLYSIDLNGRNETLIN 432
            K G   S ++ ++++      + 
Sbjct: 387 DKTG--VSNVWVMNVHSTASVQLT 408



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 43/277 (15%), Positives = 83/277 (29%), Gaps = 30/277 (10%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E      R   V++ +V  + + ++ +    G  I     S       P+ SP+   VA
Sbjct: 177 DENDMGFYRYPTVAKGMVGFVSETNIWIAPLKGG-IASRLSSTYSREGVPKLSPDGVYVA 235

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--QKDEAMDIY 285
           +      D   V++  T+     ++I           + S  +  +IS          + 
Sbjct: 236 FLGLTY-DGYDVFVAPTK-GGVVEQITFGGKAQDVASWPSKDELLVISSAFSSSMNAQLV 293

Query: 286 SVDLQSNATERLTNTLFINISASYSPDS-SQIVFESDR--------EGKEQLYV--MQSN 334
            V+  +     L     +        D      F   R        EG E +    M   
Sbjct: 294 RVNPSTRKASPLPFAKAVEG----VKDGLGCYAFVPLRQTSETKRYEGGEHIATLAMVQG 349

Query: 335 GSDQKRISQDKEASYFDPVWSPQ-------GDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            S+  +++ +         WSP+        D + F         + VM    +    L 
Sbjct: 350 DSEATQLTPESTWGLRG-AWSPESSNDAELKDHLFFISDKTGVSNVWVMNVHSTASVQLT 408

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +        S  GR LI+  ++ G    +   +  +
Sbjct: 409 HECLFDIKEISIDGRELIY--RRGGSLFMRQIMLSAD 443



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+   +AYA  ++ D   +++++        RI        +PRFS +G        
Sbjct: 727 SWSPDGSWLAYAKDEENDFTSIHVLELSTGD-STRITTPSYNAHSPRFSPDGLYLYYFSD 785

Query: 278 K 278
           +
Sbjct: 786 Q 786



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 2/50 (4%)

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
           +WSP G  L +++ ++ D  S ++ ++L+  + T I TP+Y A  P++  
Sbjct: 727 SWSPDGSWLAYAKDEENDFTS-IHVLELSTGDSTRITTPSYNAHSPRFSP 775


>gi|156396456|ref|XP_001637409.1| predicted protein [Nematostella vectensis]
 gi|156224521|gb|EDO45346.1| predicted protein [Nematostella vectensis]
          Length = 430

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 79/225 (35%), Gaps = 10/225 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+G + +SL +         Y        +   +FSP+   +A A+ D      V L   
Sbjct: 34  VTGSMDSSLMIWHFKPHMRAYRFVGHKDAILSVKFSPSGHLIASASRDK----TVRLWVP 89

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +           + + +  FS +G+  L +   D+++ +++V  Q      L   +   
Sbjct: 90  SVKGESTVFKAHTATVRSVDFSGDGQSLL-TASDDKSLKVWTVHRQ-KFLYSLNAHMNWV 147

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             A +SPD   IV  SD    + + +      D      D         + P G  IA  
Sbjct: 148 RCAKFSPDGRLIVSGSD---DKTIKLWDRTSKDCVHTFYDPGGFVNSVEFHPSGTCIA-A 203

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             +     +  ++ +   +        + + ++ PSG  L+ +  
Sbjct: 204 GGTDSTVKVWDIRMNKLLQHYQAHTGAVNSVSFHPSGNYLVSASS 248


>gi|82779223|ref|YP_405572.1| hypothetical protein SDY_4175 [Shigella dysenteriae Sd197]
 gi|81243371|gb|ABB64081.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
          Length = 414

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        NI   +   +P ++QI F   D  G  QL
Sbjct: 264 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNIPRHWVRCNPQATQIAFLMRDDNGIVQL 323

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 324 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLGN----RIACAHAQSGEVEYLTE 379

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 380 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 413



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 302 RCNPQATQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL- 360

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 361 ---GNRIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 413



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 6/101 (5%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            ++I F+            L ++   G   R LT ++  I     + P+ + + +     
Sbjct: 307 ATQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--G 361

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             I   +     ++   +   N  S   A  FS +G+    
Sbjct: 362 NRIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW 401


>gi|198454171|ref|XP_002137806.1| GA26333 [Drosophila pseudoobscura pseudoobscura]
 gi|198132683|gb|EDY68364.1| GA26333 [Drosophila pseudoobscura pseudoobscura]
          Length = 420

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 80/227 (35%), Gaps = 26/227 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  + + RFSP   ++A ++ D      V + + +      R G+  S +    +S
Sbjct: 14  FTGHSGSITQLRFSPEGSQIATSSLDG----SVIIWNLKQASRCIRFGSHSSALYGVAWS 69

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQIVFESDRE 323
             G   + S   D ++ I+   ++  + E + ++     I+    + P    ++  SD +
Sbjct: 70  PKG-SLVASAGHDRSVKIWEPKVRGVSGEFVAHSKPVRSID----FDPTGQMMLTASD-D 123

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              +++ +      Q   S  ++ ++     +SP G +IA      +   I  +      
Sbjct: 124 KSVKIWRVA---KRQFLSSFSQQTNWVRAAKFSPNGKMIATVS-DDKSLRIYDVNTGECT 179

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFS--------RKKDGDTGSKLYSI 421
             +  E    +   W P G  +  +            G    +LY +
Sbjct: 180 RTITEERGAPRQVAWHPWGNMVAVALGCNRIKIYDVGGSHLLQLYVV 226



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 68/198 (34%), Gaps = 17/198 (8%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +        I   RFS  G +   +   D ++ I+++   S    R  +        ++S
Sbjct: 12  RHFTGHSGSITQLRFSPEGSQIA-TSSLDGSVIIWNLKQASRCI-RFGSHSSALYGVAWS 69

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P  S +   +  +   +++  +  G   + ++  K        + P G  +  T    + 
Sbjct: 70  PKGSLVA-SAGHDRSVKIWEPKVRGVSGEFVAHSKP--VRSIDFDPTGQ-MMLTASDDKS 125

Query: 371 FAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             I  +    ++ + L     + + ++A  +SP+G+ +        D   ++Y ++    
Sbjct: 126 VKIWRV----AKRQFLSSFSQQTNWVRAAKFSPNGKMIATVSD---DKSLRIYDVNTGEC 178

Query: 427 NETLINTPAYASDPQWVG 444
             T+           W  
Sbjct: 179 TRTITEERGAPRQVAWHP 196


>gi|331698351|ref|YP_004334590.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Pseudonocardia dioxanivorans CB1190]
 gi|326953040|gb|AEA26737.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Pseudonocardia dioxanivorans CB1190]
          Length = 649

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 70/241 (29%), Gaps = 26/241 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +L  +  +G + R              +  +   V +A + D+ + R+            
Sbjct: 60  TLTDLLPEGFDARTAVHEYGGA----AWWVDGGTVWFANWSDQRLYRIDPDSATPTVVSP 115

Query: 252 RIGNFRSMILA-PRFSSNGKRALISVQKDEAMDIYSVDLQ------SNATERLTNTLFIN 304
                R    A    + +G   L+  Q         V  +          + L       
Sbjct: 116 EPATPRGDRWADGVVAPDGSLVLVREQHPPGGGPAQVRNEVVRLHPDGEVDVLVTGPDFV 175

Query: 305 ISASYSPDSSQIVFES----DREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGD 359
            S        ++ + S         + +  ++  GS    +       S  +P W   G 
Sbjct: 176 TSPRLDATGGRLAWVSWDHPSMPWDDTVLTVRDLGSGVDTVVAGGPGESVSEPRWQDDGS 235

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS---------PSGRSLIFSRKK 410
            + F       +++     D     +LVE++ +  P W+         P GR +  SR+ 
Sbjct: 236 -LMFVSDRTGWWSLYRWTPDDGVRPVLVEEAEIGVPGWTLGTSRHVTLPDGRVVAASRRA 294

Query: 411 D 411
            
Sbjct: 295 G 295



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 73/218 (33%), Gaps = 29/218 (13%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFS-----PNQQKVAYATYDDEDI----LRVYLM 242
            L  +D D A    ++P       + R++     P+   V              +R  ++
Sbjct: 99  RLYRIDPDSATPTVVSPEPATPRGD-RWADGVVAPDGSLVLVREQHPPGGGPAQVRNEVV 157

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-----EAMDIYSVDLQSNATERL 297
               D     +      + +PR  + G R             +   +   DL S     +
Sbjct: 158 RLHPDGEVDVLVTGPDFVTSPRLDATGGRLAWVSWDHPSMPWDDTVLTVRDLGSGVDTVV 217

Query: 298 TNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS- 355
                 ++S   +  D S + F SDR G   LY    +   +  +   +EA    P W+ 
Sbjct: 218 AGGPGESVSEPRWQDDGSLM-FVSDRTGWWSLYRWTPDDGVRPVL--VEEAEIGVPGWTL 274

Query: 356 --------PQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                   P G ++A ++ +G    + +   DG+ E L
Sbjct: 275 GTSRHVTLPDGRVVAASRRAGYD-RLLLRAPDGAVEVL 311


>gi|312198267|ref|YP_004018328.1| hypothetical protein FraEuI1c_4464 [Frankia sp. EuI1c]
 gi|311229603|gb|ADP82458.1| WD40 repeat, subgroup [Frankia sp. EuI1c]
          Length = 325

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 77/209 (36%), Gaps = 15/209 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P  + +A A+ D   I    + D R       + +    + A  FSS+G R   S  
Sbjct: 124 AFAPKTRLLATASRD-GTIGIWDVADPRTPARVAALADHDRAVTAVAFSSDGCRLA-SGG 181

Query: 278 KDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            D A+ I+ V   S      T  N   I   A +SPD   +      +   ++++   +G
Sbjct: 182 LDRAVIIWDVTNPSAPARVATIENDRAIQR-AVFSPDGGLLAIA---QWGREVFLYDVHG 237

Query: 336 SDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSN 391
            +   + +   +  + F   +SP G ++A          + I         E L      
Sbjct: 238 RNPVPVGRLAGRSDNVFSTAFSPDGRVLAVAGNEKIARLWNIADPTAPVCVETLSGHGGK 297

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + +  +SP G+ +        D   +L+S
Sbjct: 298 VFSVAFSPDGQHIA---TGSADGNVRLWS 323



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 91/232 (39%), Gaps = 24/232 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR---IGNFRSMILAPRFSSNGKRALI 274
            FSP+ + +A A+ +      V + +     AP R   +G+ RS  L   FS +G+    
Sbjct: 34  AFSPDGRLLASASSEG----SVTIWNIENSSAPVRSSVVGSRRSRFLTVAFSGDGRLLA- 88

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLY- 329
                ++ D+   DL +     L+ ++  +  +    +++P +  +   + R+G   ++ 
Sbjct: 89  --GGGKSNDVELWDLSNPVLPSLSASMAGHYKSVECVAFAPKTRLLA-TASRDGTIGIWD 145

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           V       +     D + +     +S  G  +A +        I  +    +  R+    
Sbjct: 146 VADPRTPARVAALADHDRAVTAVAFSSDGCRLA-SGGLDRAVIIWDVTNPSAPARVATIE 204

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            D  +Q   +SP G  L  +       G +++  D++GRN   +   A  SD
Sbjct: 205 NDRAIQRAVFSPDGGLLAIA-----QWGREVFLYDVHGRNPVPVGRLAGRSD 251



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 60/203 (29%), Gaps = 17/203 (8%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-----SRDQILFEPRFSPNQQKVAYATY 231
           + F  ++ +         +   D A+ R           D+ +    FS +  ++A    
Sbjct: 123 VAFAPKTRLLATASRDGTIGIWDVADPRTPARVAALADHDRAVTAVAFSSDGCRLASGGL 182

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           D      V + D     AP R+    +   I    FS +G    I+       +++  D+
Sbjct: 183 DR----AVIIWDVTNPSAPARVATIENDRAIQRAVFSPDGGLLAIA---QWGREVFLYDV 235

Query: 290 QSNATE---RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                    RL        S ++SPD   +    + +      +                
Sbjct: 236 HGRNPVPVGRLAGRSDNVFSTAFSPDGRVLAVAGNEKIARLWNIADPTAPVCVETLSGHG 295

Query: 347 ASYFDPVWSPQGDLIAFTKFSGE 369
              F   +SP G  IA     G 
Sbjct: 296 GKVFSVAFSPDGQHIATGSADGN 318



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 6/150 (4%)

Query: 183 SVVSGIIKNSLCVMDRD--GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            + SG +  ++ + D     A  R  T   D+ +    FSP+   +A A +     + +Y
Sbjct: 176 RLASGGLDRAVIIWDVTNPSAPARVATIENDRAIQRAVFSPDGGLLAIAQW--GREVFLY 233

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTN 299
            +  R      R+      + +  FS +G+   ++  +K   +   +        E L+ 
Sbjct: 234 DVHGRNPVPVGRLAGRSDNVFSTAFSPDGRVLAVAGNEKIARLWNIADPTAPVCVETLSG 293

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLY 329
                 S ++SPD   I      +G  +L+
Sbjct: 294 HGGKVFSVAFSPDGQHIA-TGSADGNVRLW 322



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 8/125 (6%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD--GANIRYLTP--SRDQILFEPRFSPN 222
           T E      R +F  +  +  I +    V   D  G N   +     R   +F   FSP+
Sbjct: 202 TIENDRAIQRAVFSPDGGLLAIAQWGREVFLYDVHGRNPVPVGRLAGRSDNVFSTAFSPD 261

Query: 223 QQKVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            + +A A   +E I R++ + D       + +      + +  FS +G+    +   D  
Sbjct: 262 GRVLAVA--GNEKIARLWNIADPTAPVCVETLSGHGGKVFSVAFSPDGQHIA-TGSADGN 318

Query: 282 MDIYS 286
           + ++S
Sbjct: 319 VRLWS 323


>gi|254418610|ref|ZP_05032334.1| peptidase, S9A/B/C family, catalytic domain protein [Brevundimonas
           sp. BAL3]
 gi|196184787|gb|EDX79763.1| peptidase, S9A/B/C family, catalytic domain protein [Brevundimonas
           sp. BAL3]
          Length = 824

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 70/186 (37%), Gaps = 17/186 (9%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQI- 316
            APRFS + K     + +   ++++ VD+ +    +LT  +      +   + PDSS + 
Sbjct: 135 TAPRFSPDAKSLAFVLDRPTGLELWVVDVATARARKLTEPVVNMTGGTGYEWLPDSSGLL 194

Query: 317 --VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                + R     +    +  + ++   +      +  + S  GD   F  +   +  + 
Sbjct: 195 VEAVPAGRGPAPDVTTAPTGPNIEETAGRVAPVRTYQDLLSNPGDEALFDHYFTSQ--LT 252

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI-------FSRKKDGD-TGSKLYSIDLNGR 426
           ++  +G   R +   +       SP G+ ++       +S     D   +++   DLNGR
Sbjct: 253 LVPLNGR-ARTIGAPAVYLDSAASPDGKYILHEIAKRPYSYAVPDDLFPTEIVVTDLNGR 311

Query: 427 NETLIN 432
               I 
Sbjct: 312 VVRTIA 317



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 54/157 (34%), Gaps = 16/157 (10%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +P  S + K  ++     +  ++ S+   +    RL  T         +P ++ +  ES 
Sbjct: 59  SPMLSPDRKTLVL----LDRSNLPSIKALAEPMLRLAGTR-------INPRNNGMA-ESR 106

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 L +   +G   + ++   EA +  P +SP    +AF         + V+    +
Sbjct: 107 VSWLTGLSLQAVDGGPARVVALPAEARFTAPRFSPDAKSLAFVLDRPTGLELWVVDVATA 166

Query: 382 QERLLVED----SNLQAPTWSPSGRSLIFSRKKDGDT 414
           + R L E     +      W P    L+      G  
Sbjct: 167 RARKLTEPVVNMTGGTGYEWLPDSSGLLVEAVPAGRG 203



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 17/131 (12%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S   SPD   +V   DR     +  +            +          +P+ + +A ++
Sbjct: 59  SPMLSPDRKTLVLL-DRSNLPSIKALA-----------EPMLRLAGTRINPRNNGMAESR 106

Query: 366 FSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            S     + +   DG   R+  L  ++   AP +SP  +SL F   +   TG +L+ +D+
Sbjct: 107 VS-WLTGLSLQAVDGGPARVVALPAEARFTAPRFSPDAKSLAFVLDR--PTGLELWVVDV 163

Query: 424 NGRNETLINTP 434
                  +  P
Sbjct: 164 ATARARKLTEP 174



 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 64/194 (32%), Gaps = 19/194 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L +   DG   R +    +     PRFSP+ + +A+   D    L ++++D    RA K 
Sbjct: 113 LSLQAVDGGPARVVALPAEARFTAPRFSPDAKSLAFV-LDRPTGLELWVVDVATARARKL 171

Query: 253 IGNFRSMILAPR--FSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS- 308
                +M       +  +    L+ +V              +      T      ++   
Sbjct: 172 TEPVVNMTGGTGYEWLPDSSGLLVEAVPAGRGPAPDVTTAPTGPNIEETAGR---VAPVR 228

Query: 309 -----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                 S    + +F  D     QL ++  NG  +   +    A Y D   SP G  I  
Sbjct: 229 TYQDLLSNPGDEALF--DHYFTSQLTLVPLNGRAR---TIGAPAVYLDSAASPDGKYIL- 282

Query: 364 TKFSGEKFAIGVMK 377
            + +   ++  V  
Sbjct: 283 HEIAKRPYSYAVPD 296


>gi|320168673|gb|EFW45572.1| NLE1 protein [Capsaspora owczarzaki ATCC 30864]
          Length = 516

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 91/278 (32%), Gaps = 30/278 (10%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTI----SDDIYQSITGEKGDFNSRILFVSESVVSG 187
           D       +      +P   R + +++     D  Y     E+    +     ++  +S 
Sbjct: 65  DGSTTGPPLDLPLNVTPDQLRILLNSLLKAEDDTPYSFFVNEEEVTETVHSAFAKQGLSS 124

Query: 188 IIKNSLCVMDRDGANIRYLT------PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +   +  + +    +R +T      P     +    FSP+  ++A  + D      V  
Sbjct: 125 EVALQILYVPQAVFRVRAVTRCTSSMPGHSDSVTTVAFSPDGTRLASGSGDT----TVRF 180

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTN 299
            D R           +  +LA  +S +GK        D+   IY  D ++   +   +T 
Sbjct: 181 WDVRTQTPEHTCTGHKHWVLAIAWSPDGKHVA---TADKNSQIYVWDAENGKAKCGPMTG 237

Query: 300 TLFINISASY-----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                   S+     +P+  +    + ++G  +++    +   ++ +    + +      
Sbjct: 238 HSSWVNWISWEPVHLNPECRRFA-TASKDGTVKIW----DILQKRCLMTFAQHTNSVTCV 292

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
              G+ + +T        +  +  DG   R L   ++ 
Sbjct: 293 KWGGEGLIYTASQDRTIKVWRV-ADGVMCRSLTGHAHW 329



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 53/142 (37%), Gaps = 9/142 (6%)

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            E +VSG    ++ + D  +            Q++    FSP+ + +  A++D      V
Sbjct: 375 RERLVSGSDDFTMFLWDPSESKQPITRMTGHQQVVNHLSFSPDGRYITSASFDK----SV 430

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L D R  +           +    +S++  R  +S  KD  M ++  D+ S   +    
Sbjct: 431 KLWDGRTGKFICTFRGHVGPVYQVAWSAD-SRLCVSASKDSTMKVW--DMASKHLKFDLP 487

Query: 300 TLFINISAS-YSPDSSQIVFES 320
                + A  +SPD   +   S
Sbjct: 488 GHADEVFAVDWSPDGESVASGS 509



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 41/137 (29%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+  L+S   D  M ++          R+T    +    S+SPD   I   S     + +
Sbjct: 374 GRERLVSGSDDFTMFLWDPSESKQPITRMTGHQQVVNHLSFSPDGRYITSASF---DKSV 430

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +      +   WS     +  +        +  M     +  L   
Sbjct: 431 KLWDGRTGKFICTFRGHVGPVYQVAWSADSR-LCVSASKDSTMKVWDMASKHLKFDLPGH 489

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G S+ 
Sbjct: 490 ADEVFAVDWSPDGESVA 506



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 37/115 (32%), Gaps = 13/115 (11%)

Query: 292 NATERLTN----TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            A  R T+          + ++SPD +++   S   G   +          +      + 
Sbjct: 141 RAVTRCTSSMPGHSDSVTTVAFSPDGTRLASGS---GDTTVRFWDVRTQTPEHTCTGHKH 197

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSP 399
                 WSP G  +A    + +   I V   +  + +   +    S +   +W P
Sbjct: 198 WVLAIAWSPDGKHVA---TADKNSQIYVWDAENGKAKCGPMTGHSSWVNWISWEP 249



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 30/101 (29%), Gaps = 6/101 (5%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                S     +SP G  +A +           ++    +         + A  WSP G+
Sbjct: 151 PGHSDSVTTVAFSPDGTRLA-SGSGDTTVRFWDVRTQTPEHTCTGHKHWVLAIAWSPDGK 209

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +        D  S++Y  D             ++S   W+
Sbjct: 210 HVA-----TADKNSQIYVWDAENGKAKCGPMTGHSSWVNWI 245



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 46/138 (33%), Gaps = 8/138 (5%)

Query: 232 DDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L D    + P  R+   + ++    FS +G+    S   D+++ ++  D +
Sbjct: 380 SGSDDFTMFLWDPSESKQPITRMTGHQQVVNHLSFSPDGRYIT-SASFDKSVKLW--DGR 436

Query: 291 SNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +          +      ++S DS   V  S       + V        K          
Sbjct: 437 TGKFICTFRGHVGPVYQVAWSADSRLCVSASK---DSTMKVWDMASKHLKFDLPGHADEV 493

Query: 350 FDPVWSPQGDLIAFTKFS 367
           F   WSP G+ +A     
Sbjct: 494 FAVDWSPDGESVASGSRD 511


>gi|134057100|emb|CAK44388.1| unnamed protein product [Aspergillus niger]
          Length = 649

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 73/221 (33%), Gaps = 17/221 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  ++  +FS +  K+  A+ D      V + +T      +++      +    +S
Sbjct: 323 LNQHSDEVWWCQFSNDGTKLVTASKDQ----TVIIYETSTFSVIQKLLGHEDGVAQCAWS 378

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREG 324
            +  +  I+  +D+   ++SV+L       LT  +      +A+++PD    V  +  + 
Sbjct: 379 PDDSKI-ITCSQDKTARVWSVELAKTGRCLLTINHHRHPVTAAAWAPDGESFV-TAALDV 436

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             QL      G  Q      +     D   +P G  +           + V       E 
Sbjct: 437 SSQLCHWGMRG--QTLYMWPEGFRVQDCAITPDGRRLIAADLDQ---KVHVYNLATRDEE 491

Query: 385 L-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             L   S   +   S   R ++ +     D   +L  I+  
Sbjct: 492 YCLALKSKPTSVAVSRDSRHMLINS---ADGQIQLVDINTT 529



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 36/289 (12%), Positives = 96/289 (33%), Gaps = 25/289 (8%)

Query: 112 VTGRVIKE---GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD--DIYQSI 166
           V G +        +RL +   L D   + QI    + +S +     +  + D  D     
Sbjct: 263 VAGSISPSVMIPDNRLAI---LLDHVKQTQINQCLYHNSASPPSLYSDHMCDRKDFPLRT 319

Query: 167 TGEKGDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
             E    +  + +   S      V+     ++ + +    ++       +  + +  +SP
Sbjct: 320 GIELNQHSDEVWWCQFSNDGTKLVTASKDQTVIIYETSTFSVIQKLLGHEDGVAQCAWSP 379

Query: 222 NQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           +  K+   + D     RV+ ++  +  R    I + R  + A  ++ +G+   ++   D 
Sbjct: 380 DDSKIITCSQD--KTARVWSVELAKTGRCLLTINHHRHPVTAAAWAPDGES-FVTAALDV 436

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           +  +    ++            +    + +PD  +++  +D + K  +Y + +   +   
Sbjct: 437 SSQLCHWGMRGQTLYMWPEGFRVQD-CAITPDGRRLI-AADLDQKVHVYNLATRDEEYCL 494

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
             + K  S      S     +      G    I ++  + +        
Sbjct: 495 ALKSKPTSV---AVSRDSRHMLINSADG---QIQLVDINTTDVVRRFSG 537


>gi|88860731|ref|ZP_01135368.1| hypothetical protein PTD2_05720 [Pseudoalteromonas tunicata D2]
 gi|88817326|gb|EAR27144.1| hypothetical protein PTD2_05720 [Pseudoalteromonas tunicata D2]
          Length = 940

 Score = 59.3 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 51/269 (18%), Positives = 86/269 (31%), Gaps = 45/269 (16%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR----------------APKRIGN 255
            I   P  SP Q K+A  + D +   ++ +  T  ++                 PK I +
Sbjct: 294 HIQQSPSLSPEQDKIAMVSVDKKGNTQLNIFATADNKKAAEEFSKKQQEILADDPKDITD 353

Query: 256 FRSMILA-----------------PRFSSNGKRA--LISVQKDE----AMDIYSVDLQSN 292
               + A                 P++  N        SV  +E      D++  D  S 
Sbjct: 354 KAPTVFAREEKNVLQQIDQKGIMNPQWLDNDTLIFGAFSVANNELNTRHQDLFRYDTNSG 413

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             E+LT  L      S S D +    E  + G  +L  +  +      I+    A+ +D 
Sbjct: 414 KVEQLT-ELANLRRFSISGDKTIAYAERAQFGYSELVKVDLSSGLVTEITSKDLATVYDF 472

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRK 409
               Q  L        E +A+ V   D      +   +  Q    P WS  G+S+ +   
Sbjct: 473 PIVHQNKLAYLKTALNENWALWVKNLDDQTISSVPMPAGYQFLSYPAWSADGQSIYYVAG 532

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             G+T   +Y  D  G     +      +
Sbjct: 533 VAGET--NIYRYDFTGDRLVQLTQGQQVT 559



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 64/213 (30%), Gaps = 6/213 (2%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNG-KR 271
           +  P++  N   +  A     + L     D  R D    ++     +    RFS +G K 
Sbjct: 375 IMNPQWLDNDTLIFGAFSVANNELNTRHQDLFRYDTNSGKVEQLTELANLRRFSISGDKT 434

Query: 272 ALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLY 329
              + +      ++  VDL S     +T+     +        +++ +          L+
Sbjct: 435 IAYAERAQFGYSELVKVDLSSGLVTEITSKDLATVYDFPIVHQNKLAYLKTALNENWALW 494

Query: 330 VMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           V   +      +           P WS  G  I +      +  I      G +   L +
Sbjct: 495 VKNLDDQTISSVPMPAGYQFLSYPAWSADGQSIYYVAGVAGETNIYRYDFTGDRLVQLTQ 554

Query: 389 DSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYS 420
              + A P     G  L  +    G    KL +
Sbjct: 555 GQQVTAYPMPMQDGGILYQAINSQGPDLYKLAA 587



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 39/113 (34%), Gaps = 2/113 (1%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQKDEA 281
           Q K+AY      +   +++ +                 L+ P +S++G+           
Sbjct: 477 QNKLAYLKTALNENWALWVKNLDDQTISSVPMPAGYQFLSYPAWSADGQSIYYVAGVAGE 536

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +IY  D   +   +LT    +        D   I++++       LY + ++
Sbjct: 537 TNIYRYDFTGDRLVQLTQGQQVTAYPMPMQDGG-ILYQAINSQGPDLYKLAAD 588


>gi|262383728|ref|ZP_06076864.1| dipeptidyl aminopeptidase [Bacteroides sp. 2_1_33B]
 gi|262294626|gb|EEY82558.1| dipeptidyl aminopeptidase [Bacteroides sp. 2_1_33B]
          Length = 744

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 53/155 (34%), Gaps = 35/155 (22%)

Query: 308 SYSPDS--------SQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQG 358
            +S D+        +Q V+  D  G    +V+       +++ +   E+S     +SP G
Sbjct: 102 FWSADNEKVLIYNNTQRVWRYDTRG--DYWVLSLKDGTLRQLGKGMPESSMMFAKFSPDG 159

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL------------------QAPTWSPS 400
             +A+   +     I V   D  +   L +D +                       WSP 
Sbjct: 160 TRVAYVSNN----NIYVEDIDSGKITQLTKDGSDTIVNGTFDWVYEEEFSCRDGFRWSPD 215

Query: 401 GRSLIFS-RKKDGDTGSKLYSIDLNGRNETLINTP 434
           G+ + +      G     + + +++     +I+ P
Sbjct: 216 GKHIAYWQSDTKGTGVFDIIN-NVDSIYAKVIHFP 249



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/322 (13%), Positives = 99/322 (30%), Gaps = 73/322 (22%)

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           ++ V     +    V+  +DG   +      +  +   +FSP+  +VAY + ++     +
Sbjct: 116 TQRVWRYDTRGDYWVLSLKDGTLRQLGKGMPESSMMFAKFSPDGTRVAYVSNNN-----I 170

Query: 240 YLMDTRIDRAPKRIGNFRSMIL----------------APRFSSNGKRALISVQKDEAMD 283
           Y+ D    +  +   +    I+                  R+S +GK         +   
Sbjct: 171 YVEDIDSGKITQLTKDGSDTIVNGTFDWVYEEEFSCRDGFRWSPDGKHIAYWQSDTKGTG 230

Query: 284 IYSV--DLQSNATERL-------------------------TNTLFINISAS-------- 308
           ++ +  ++ S   + +                         T  + I             
Sbjct: 231 VFDIINNVDSIYAKVIHFPYPKAGTTNSAVKVGYVSSTGGNTTWIAIPGDPRNNYLPRME 290

Query: 309 YSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLI 361
           + P+S ++ F    +  +   ++++ + + +    I  D +A++ D      W       
Sbjct: 291 FIPESDEL-FIQQLNRPQNTNKVWIAKISDNSLNNIFTDTDAAWLDTNDNIQWLKDNRYF 349

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-----SLIFSRKKDGDTGS 416
            +         +  + +DG + + + +         SP G       + F    D  T  
Sbjct: 350 TWESERSGWRHLYRISRDGKEIQPITKG---DFDYISPVGTDLQKGWVYFIASPDNFTQR 406

Query: 417 KLYSIDLNGRNETLINTPAYAS 438
            LY     G  E    +P   S
Sbjct: 407 YLYRAKAFGNGEVERVSPMEQS 428


>gi|83814532|ref|YP_446489.1| hypothetical protein SRU_2390 [Salinibacter ruber DSM 13855]
 gi|83755926|gb|ABC44039.1| conserved hypothetical protein [Salinibacter ruber DSM 13855]
          Length = 372

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 69/199 (34%), Gaps = 7/199 (3%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +  + + +   V ++D        RI     M    RF+ +G+        D    ++ V
Sbjct: 147 FNLHGEPEPSTVSVVDPEAMTEVDRIETGI-MPHGSRFAPDGRTHYSVSMMDGT--LHEV 203

Query: 288 DLQSNATER-LTNTLFINISASY-SPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQD 344
           D+ +    R LT         ++  P  S+   + +     E + V + + +  +R+   
Sbjct: 204 DVLTGRVTRTLTTGEGTP-KPTWVDPHPSRPLAYVAHNGADEVVVVDRDDWAVTQRLPTG 262

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           +  + ++   SP G  +  +     +  I  ++      RL    S       SP  R  
Sbjct: 263 EGTAPYNLEVSPDGTTLVVSYKGTGETGIWNLETGERAARLANSQSVTHGVVISPDSRYA 322

Query: 405 IFSRKKDGDTGSKLYSIDL 423
             S +  GD    +   DL
Sbjct: 323 FVSAEGRGDDPGAVDVFDL 341



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 55/162 (33%), Gaps = 8/162 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISV 276
           RF+P+ +     +  D  +  V ++  R+ R      G  +   + P  S   +      
Sbjct: 182 RFAPDGRTHYSVSMMDGTLHEVDVLTGRVTRTLTTGEGTPKPTWVDPHPS---RPLAYVA 238

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                  +         T+RL         +   SPD + +V      G+  ++ +++ G
Sbjct: 239 HNGADEVVVVDRDDWAVTQRLPTGEGTAPYNLEVSPDGTTLVVSYKGTGETGIWNLET-G 297

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
               R++  +  ++   V SP     AF    G     G + 
Sbjct: 298 ERAARLANSQSVTHGV-VISPDSRY-AFVSAEGRGDDPGAVD 337



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 48/159 (30%), Gaps = 15/159 (9%)

Query: 185 VSGIIKNSLCVMD--------RDGANIRYLTPSRDQILFEPRF-SPNQQKVAYATYDDED 235
             G    S+ +MD          G   R LT        +P +  P+  +       +  
Sbjct: 185 PDGRTHYSVSMMDGTLHEVDVLTGRVTRTLTTGEGTP--KPTWVDPHPSRPLAYVAHNGA 242

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-T 294
              V +         +      +       S +G   ++S +      I+  +L++    
Sbjct: 243 DEVVVVDRDDWAVTQRLPTGEGTAPYNLEVSPDGTTLVVSYKGTGETGIW--NLETGERA 300

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            RL N+  +      SPD S+  F S     +    +  
Sbjct: 301 ARLANSQSVTHGVVISPD-SRYAFVSAEGRGDDPGAVDV 338


>gi|304394993|ref|ZP_07376877.1| 40-residue YVTN family beta-propeller repeat protein [Pantoea sp.
           aB]
 gi|304357246|gb|EFM21609.1| 40-residue YVTN family beta-propeller repeat protein [Pantoea sp.
           aB]
          Length = 485

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 24/196 (12%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----------RFSSNGKRALIS 275
            YA     + + V    +       ++G+ +   L+P            FS +GK   + 
Sbjct: 43  VYAAEQFSNTVSVTDPASNTLLGVIKLGDAQPANLSPLYKGQVLVHGLGFSPDGKTLAVV 102

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                +  +  +D  +NA + +T        A ++PD  +I + + R       +  ++G
Sbjct: 103 SI--GSNSVSLIDTATNAVKHVTYVGRSPHEAFFTPDGKEI-WVTVRGENYIAVLDGNSG 159

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQ 393
            ++ RI+          ++SP G            F    +  D    +++  ++  +  
Sbjct: 160 EEKTRITVPGGPGM--QIFSPDGQYGYVCS----SFNPETVVVDAKAHKIIGSIKQVSPF 213

Query: 394 APTWS--PSGRSLIFS 407
            P  +  P GR + F+
Sbjct: 214 CPNIAATPDGRQVWFT 229



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 54/159 (33%), Gaps = 14/159 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A  +     +  +      +    K +           F+ +GK   ++V+ 
Sbjct: 92  FSPDGKTLAVVSIGSNSVSLIDTATNAV----KHVTYVGRSPHEAFFTPDGKEIWVTVR- 146

Query: 279 DEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                I  +D  S     R+T      +   +SPD       S      +  V+ +    
Sbjct: 147 -GENYIAVLDGNSGEEKTRITVPGGPGMQ-IFSPDGQYGYVCSSF--NPETVVVDA--KA 200

Query: 338 QKRISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAIG 374
            K I   K+ S F P    +P G  + FT     K  + 
Sbjct: 201 HKIIGSIKQVSPFCPNIAATPDGRQVWFTLKDVGKVQVF 239



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 42/116 (36%), Gaps = 10/116 (8%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +   S   G   + ++ +  +  K ++    + +    ++P G  I +    G
Sbjct: 92  FSPDGKTLAVVSI--GSNSVSLIDTATNAVKHVTYVGRSPHEAF-FTPDGKEI-WVTVRG 147

Query: 369 EKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           E + I V+  +  +E+  +          +SP G+              +   +D 
Sbjct: 148 ENY-IAVLDGNSGEEKTRITVPGGPGMQIFSPDGQYGYVCSS----FNPETVVVDA 198



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 78/192 (40%), Gaps = 16/192 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+ +++ + T   E+ + V   ++  ++    +     M +   FS +G+   +    
Sbjct: 134 FTPDGKEI-WVTVRGENYIAVLDGNSGEEKTRITVPGGPGMQI---FSPDGQYGYVCSS- 188

Query: 279 DEAMDIYSVDLQS----NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               +   VD ++     + +++ +    NI+A+  PD  Q+ F     GK Q++  +  
Sbjct: 189 -FNPETVVVDAKAHKIIGSIKQV-SPFCPNIAAT--PDGRQVWFTLKDVGKVQVFDARPP 244

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            +  K I      ++ + V + +G   A+    G    + V + D  ++   +   NL  
Sbjct: 245 FTLLKTIDSGPITNHVNIVHNAKGTF-AYVTI-GGLNKVNVYRTDDFRQVATIPVGNLPH 302

Query: 395 PTW-SPSGRSLI 405
             W S  G  + 
Sbjct: 303 GVWPSGDGSRVY 314


>gi|303279977|ref|XP_003059281.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459117|gb|EEH56413.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 517

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 47/251 (18%), Positives = 85/251 (33%), Gaps = 31/251 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRV-YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-- 274
            +SP+   +A       D L V Y  D  + +           + + R+  +G    I  
Sbjct: 255 AWSPDGTSIAVWDAPHRDSLVVSYAPDGTLKKKYADKNEGPLGVKSARWCPDGSGIAIGS 314

Query: 275 ----SVQKDEAMDIYSVDLQSNATERLTNTLF----------INISASYSPDSSQIVFES 320
                V  +      ++DL+     RL  T             ++ AS +PD+ +   ++
Sbjct: 315 FDRRCVVLNHVSFAPALDLRHADAVRLPTTAAVYKEVEEGNPYDMEAS-APDAKEAQLKA 373

Query: 321 DREGKEQL---YVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             +G+ ++   YV+Q         R     +       WS  G  IA T       A+ +
Sbjct: 374 LHKGEARVSARYVVQKLPAPVPTTRPGTRPKLGVGRTEWSHDGRFIA-TVDEKSPTAVWI 432

Query: 376 MKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               D     +L++  ++   +W P G  L          G ++Y     G +   I  P
Sbjct: 433 WDAVDSGLAAVLLQMGDVTGVSWDPRGDRLAVVT-----GGERVYVWTPEGASFVQIPLP 487

Query: 435 AY-ASDPQWVG 444
            + A D  W  
Sbjct: 488 DFNAKDVAWSP 498



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 73/215 (33%), Gaps = 19/215 (8%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVY--LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            P FSP+ + +A    D   ++R    L    I +  + I           +S +G   L
Sbjct: 82  PPTFSPDGRYLA-TAVDHRCVIRDAESLEVLSISQCVEHIDRVE-------WSRDGDHVL 133

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +  +   +  +SV      T ++       + A ++P  +QI+  ++     +      
Sbjct: 134 CAQYRVGVVQCFSVS-NDAWTCKIDEAAAGCVYARWTPCGTQIITVAEF--NVRATAWSL 190

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG----SQERLLVED 389
                  +   K AS     +SP G  +A+ +       + V+        +  R+   D
Sbjct: 191 VDRSCVVLDAPKLASADGFSFSPDGKFLAYARREACVDYVRVVSTKTWTTAADYRVATSD 250

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  WSP G S+        D+    Y+ D  
Sbjct: 251 --CAGLAWSPDGTSIAVWDAPHRDSLVVSYAPDGT 283



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/103 (13%), Positives = 35/103 (33%), Gaps = 6/103 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + + +A  T D++    V++ D         +      +    +   G R  +    
Sbjct: 412 WSHDGRFIA--TVDEKSPTAVWIWDAVDSGLAAVLLQM-GDVTGVSWDPRGDRLAVVT-- 466

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
                +Y    +  +  ++    F     ++SP   ++V   D
Sbjct: 467 -GGERVYVWTPEGASFVQIPLPDFNAKDVAWSPTGGEMVLSDD 508


>gi|21220714|ref|NP_626493.1| serine/threonine protein kinase [Streptomyces coelicolor A3(2)]
 gi|6714656|emb|CAB66178.1| probable serine/threonine protein kinase [Streptomyces coelicolor
           A3(2)]
          Length = 686

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 67/215 (31%), Gaps = 30/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             SP+ + +A       D     L D  R    P+   +         FS +G+      
Sbjct: 450 ALSPDGKWIA-----LGDSAGANLWDLGRRGEDPRAHLSQNLHATDLAFSPDGRTLASVG 504

Query: 277 Q-KDEAMDIYSVDLQSNATERLTNTLFINISAS-------------YSPDSSQIVFESDR 322
              D+   + +   +     RL    +                   +SPD   +     +
Sbjct: 505 DFSDQRYQVENEPAKLWDLTRLDPRPYGQGDPRHNLALEDVVYAVAFSPDGKTLA-TGGQ 563

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G  +L+   + G  +  ++        D  +SP G  +A T    E   +     D   
Sbjct: 564 GGGVRLWDA-ATGRPKATLTHKFVTEARDLAFSPDGSTLAVTA---EGRVLLWNLADRKP 619

Query: 383 ERLLVED-----SNLQAPTWSPSGRSLIFSRKKDG 412
             +L +D     +++    +SP GR L  +    G
Sbjct: 620 SAILADDETGFGADINELAFSPDGRFLAGTTTGGG 654



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 82/231 (35%), Gaps = 29/231 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A    D +  L             ++     S ++   FS++GK  +    
Sbjct: 365 AFSPDGETLATGGQDGKVRLWDAATRKVRATLVEKGWYGPSRVVGVTFSADGKTLV---T 421

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +     +   D+      R         S + SPD   I    D  G   L+ +   G D
Sbjct: 422 RTGTHLVGVWDVARRREVRRIEESAY--SLALSPDGKWIA-LGDSAGAN-LWDLGRRGED 477

Query: 338 QK-RISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAI--------GVMKKD------GS 381
            +  +SQ+  A+     +SP G  +A    FS +++ +         + + D      G 
Sbjct: 478 PRAHLSQNLHATDL--AFSPDGRTLASVGDFSDQRYQVENEPAKLWDLTRLDPRPYGQGD 535

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
               L  +  + A  +SP G++L          G +L+     GR +  + 
Sbjct: 536 PRHNLALEDVVYAVAFSPDGKTLA---TGGQGGGVRLWDA-ATGRPKATLT 582



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 51/166 (30%), Gaps = 21/166 (12%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           GDF+ +   V            L        + R+     D +++   FSP+ + +A   
Sbjct: 504 GDFSDQRYQVENEPAKLWDLTRLDPRPYGQGDPRHNLALED-VVYAVAFSPDGKTLA--- 559

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGN-FRSMILAPRFSSNGKRALISVQK--------DEA 281
                   V L D    R    + + F +      FS +G    ++ +         D  
Sbjct: 560 -TGGQGGGVRLWDAATGRPKATLTHKFVTEARDLAFSPDGSTLAVTAEGRVLLWNLADRK 618

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                 D ++           IN   ++SPD   +   +   G  +
Sbjct: 619 PSAILADDETG------FGADIN-ELAFSPDGRFLAGTTTGGGAPE 657


>gi|291568226|dbj|BAI90498.1| serine/threonine protein kinase with WD-40 repeats [Arthrospira
           platensis NIES-39]
          Length = 825

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 99/303 (32%), Gaps = 44/303 (14%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLW----DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
             +   +   E   +  V   L     DV   KQ     F    A+ + +A +    I  
Sbjct: 502 DCITAAQTFPESSPQYAVAQELLSQCQDVISWKQAKVNTFPIHTAAVQSVAVSPDGRIIA 561

Query: 165 SITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGAN-----------IRYLTPSRDQ 212
           S + +     +R+  + +  V+   + NS  ++  D +N            + +  + + 
Sbjct: 562 SGSRDN---TTRLWHIETGEVLQNFVGNSSAILSVDFSNDGLSLAAGTQLSQVIEWNLET 618

Query: 213 ILFEP-----------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           I + P           + SP+ + +A  + D      V + + R            +++ 
Sbjct: 619 IEWYPPLVGASPIEALQISPDNRAIATGSADG----NVRVWNRRTGLILYNNNQHSTIVY 674

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFES 320
           +  F+ NG+  +         +I+ +D Q +    R         S + +PD  QIV   
Sbjct: 675 SVAFTPNGRWLV---TGSGDGNIHIIDWQIDQLRHRFPGHTGEVRSLAITPDGLQIV--- 728

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + +     +++ R       +      SP G  IA +        + +   + 
Sbjct: 729 SGGTDNNIKIWNLITAEEARTLTGHRGAVIAVAVSPDGTQIASSSRDRT---VKIWDLET 785

Query: 381 SQE 383
            + 
Sbjct: 786 GEL 788



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 77/242 (31%), Gaps = 26/242 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   N+  +   +   +          +    FS +   +A        + +V   +  
Sbjct: 562 SGSRDNTTRLWHIETGEVLQNFVGNSSAILSVDFSNDGLSLA----AGTQLSQVIEWNLE 617

Query: 246 IDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TL 301
                P  +G     I A + S + +    +   D  + ++  + ++     L N     
Sbjct: 618 TIEWYPPLVGASP--IEALQISPDNRAIA-TGSADGNVRVW--NRRTGLI--LYNNNQHS 670

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I  S +++P+   +V  S   G   ++++       +               +P G  I
Sbjct: 671 TIVYSVAFTPNGRWLVTGS---GDGNIHIIDWQIDQLRHRFPGHTGEVRSLAITPDGLQI 727

Query: 362 AFTKFSGEKFAIGVMKKDGSQE-RLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                 G    I +     ++E R L      + A   SP G  +  S +   D   K++
Sbjct: 728 V---SGGTDNNIKIWNLITAEEARTLTGHRGAVIAVAVSPDGTQIASSSR---DRTVKIW 781

Query: 420 SI 421
            +
Sbjct: 782 DL 783



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 49/126 (38%), Gaps = 8/126 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+G    ++ ++D     +R+  P     +     +P+  ++     D+     + + + 
Sbjct: 686 VTGSGDGNIHIIDWQIDQLRHRFPGHTGEVRSLAITPDGLQIVSGGTDN----NIKIWNL 741

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
                 + +   R  ++A   S +G +   S  +D  + I+  DL++      LTN   +
Sbjct: 742 ITAEEARTLTGHRGAVIAVAVSPDGTQIA-SSSRDRTVKIW--DLETGELLNTLTNPQAV 798

Query: 304 NISASY 309
             S  +
Sbjct: 799 VNSLVF 804



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 62/174 (35%), Gaps = 26/174 (14%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDS 313
             + + +   S +G+    S  +D    ++   +++    +  + N+  I +S  +S D 
Sbjct: 544 HTAAVQSVAVSPDGRIIA-SGSRDNTTRLW--HIETGEVLQNFVGNSSAI-LSVDFSNDG 599

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFA 372
             +       G +   V++ N    +       AS  +    SP    IA     G    
Sbjct: 600 LSLA-----AGTQLSQVIEWNLETIEWYPPLVGASPIEALQISPDNRAIATGSADG---N 651

Query: 373 IGVMKKDGSQERLLVEDSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           + V  +      +L  ++       +  ++P+GR L+      G     ++ ID
Sbjct: 652 VRVWNRRTGL--ILYNNNQHSTIVYSVAFTPNGRWLV-----TGSGDGNIHIID 698


>gi|126324702|ref|XP_001375124.1| PREDICTED: similar to SOCS box-containing WD protein SWiP-2
           [Monodelphis domestica]
          Length = 356

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 76/199 (38%), Gaps = 21/199 (10%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           ++ + + +  R    +   + ++    F+ NG   L+S  +D+ + I+ ++      + L
Sbjct: 86  QIKIWEVQTGRLLLNLSGHQDVVRDLSFTPNGNLILVSASRDKTLRIWDLNKDGKQIQVL 145

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +  L      S SPD S +       G++ + +         R  +  ++S     +SP 
Sbjct: 146 SGHLQWVYCCSISPDCSMLC---SAAGEKSVLLWSMRSYTLIRKLEGHQSSVVSCDFSPD 202

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLL-------------VEDSNLQAPTWSPSGRSL 404
             L+    +      I      G + R L             V  S+L++  +SP G   
Sbjct: 203 SALLVTASYDTS--VIMWDPYTGEKLRTLQHVLDSQLDYARDVHASSLRSVRFSPEG--- 257

Query: 405 IFSRKKDGDTGSKLYSIDL 423
           ++      D   ++++++L
Sbjct: 258 LYLATVADDRLLRIWALEL 276


>gi|163849066|ref|YP_001637110.1| hypothetical protein Caur_3537 [Chloroflexus aurantiacus J-10-fl]
 gi|163670355|gb|ABY36721.1| conserved hypothetical protein [Chloroflexus aurantiacus J-10-fl]
          Length = 380

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 77/263 (29%), Gaps = 28/263 (10%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR----- 238
           VV     + L     DG+N + +       L   R+SP+   + Y  + +    R     
Sbjct: 94  VVGAATGDRLVRAALDGSNPQVIYSETGHQLSAVRWSPDGSTI-YLRFQNNREPRDLPDG 152

Query: 239 VYLMDTRIDRAPKRIGNFRSMI----------LAP-RFSSNGKRALISVQKDEAMDIYSV 287
           +Y +          + +                AP  +   G   LI        D   V
Sbjct: 153 LYRIPASGGTLELLLADDPVDDPLNPSRSVRSYAPFLWDPTGTTLLIESFATFYDDCELV 212

Query: 288 --DLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
               Q     R       +     A +  D S  +     +    ++ + +       +S
Sbjct: 213 FWHPQDKTLRRPVTPEGTHSFCGEAVWRGDGSAALLLIGPDTGPGVWQVDAQTGQATALS 272

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVEDSNLQAP---TWS 398
            D   +    +       +A  + +    F +     DG+  R  +     + P    W+
Sbjct: 273 NDGILARAPFLIGNDLLFVAVERVNDGFSFTLTRQSPDGT--RTPLRPPFREIPLLIRWA 330

Query: 399 PSGRSLIFSRKKDGDTGSKLYSI 421
           P G  ++   + +  T  + Y I
Sbjct: 331 PDGSGIVAVVQTNSGTALRWYPI 353



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 64/199 (32%), Gaps = 11/199 (5%)

Query: 206 LTPSRDQILFEP-RFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           L PSR    + P  + P    +    +AT+ D+  L  +    +  R P       S   
Sbjct: 176 LNPSRSVRSYAPFLWDPTGTTLLIESFATFYDDCELVFWHPQDKTLRRPVTPEGTHSFCG 235

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +  +G  AL+ +  D    ++ VD Q+     L+N   +  +       + ++F + 
Sbjct: 236 EAVWRGDGSAALLLIGPDTGPGVWQVDAQTGQATALSNDGILARAPFLI--GNDLLFVAV 293

Query: 322 R---EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
               +G       QS    +  +            W+P G  I     +    A+     
Sbjct: 294 ERVNDGFSFTLTRQSPDGTRTPLRPPFREIPLLIRWAPDGSGIVAVVQTNSGTALRWYPI 353

Query: 379 DGSQERLLVEDSNLQAPTW 397
                  L +    +  +W
Sbjct: 354 GNQPAVALPQT--DEGVSW 370



 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 17/131 (12%), Positives = 41/131 (31%), Gaps = 20/131 (15%)

Query: 280 EAMDIYSVDLQSNATERLTNTL----------FINISASYSPDSSQIVFESDREGKEQLY 329
           +   I  ++       +LT              +++  +     + +++       ++L 
Sbjct: 50  DRGQIARIESDGATRRQLTRERIEQTGIPPISDMDVHPT-----AGLIYVVGAATGDRLV 104

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQER 384
               +GS+ + I  +         WSP G  I     +  +       +  +   G    
Sbjct: 105 RAALDGSNPQVIYSETGHQLSAVRWSPDGSTIYLRFQNNREPRDLPDGLYRIPASGGTLE 164

Query: 385 LLVEDSNLQAP 395
           LL+ D  +  P
Sbjct: 165 LLLADDPVDDP 175


>gi|282901648|ref|ZP_06309564.1| Serine/Threonine protein kinase with WD40 repeat proteins
           [Cylindrospermopsis raciborskii CS-505]
 gi|281193411|gb|EFA68392.1| Serine/Threonine protein kinase with WD40 repeat proteins
           [Cylindrospermopsis raciborskii CS-505]
          Length = 687

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 73/219 (33%), Gaps = 11/219 (5%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + + +          P   Q +     SP+   +        D   + + + +  
Sbjct: 413 AGHKEIKLWNSKTGKQIISLPGHTQNINALAISPDGNNLV----SAGDDKTIKVWNLQTK 468

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +    +   +  I A   S +  + L+S   D+ + ++S+ L     + L    +   S 
Sbjct: 469 KLTFNLVGHQDSIQALAISQD-SKILVSAGDDKTIKVWSL-LTGKFLKTLLGHNYWVRSL 526

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           + SPD   +   S  +   +++ +  ++G     +      +     +SP    +  T  
Sbjct: 527 ALSPDGFTLASGSF-DKTIKIWNINQTSGQKPTTLLDTTSQTVTSLAFSPDTSTLVSTSR 585

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 I        +     +  N+ +  +SP G++LI
Sbjct: 586 DR---QIKFWDIKNKEIIFASKKQNVTSVIFSPDGKTLI 621



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 60/195 (30%), Gaps = 14/195 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +P+   +  A + +     + L +++  +    +      I A   S +G   +    
Sbjct: 402 AITPDGNTIVSAGHKE-----IKLWNSKTGKQIISLPGHTQNINALAISPDGNNLV---S 453

Query: 278 KDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +   I   +LQ+      L        + + S DS  +V   D    + + V      
Sbjct: 454 AGDDKTIKVWNLQTKKLTFNLVGHQDSIQALAISQDSKILVSAGD---DKTIKVWSLLTG 510

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQA 394
              +              SP G  +A   F        + +  G +   L       + +
Sbjct: 511 KFLKTLLGHNYWVRSLALSPDGFTLASGSFDKTIKIWNINQTSGQKPTTLLDTTSQTVTS 570

Query: 395 PTWSPSGRSLIFSRK 409
             +SP   +L+ + +
Sbjct: 571 LAFSPDTSTLVSTSR 585



 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 50/135 (37%), Gaps = 14/135 (10%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + +PD + IV      G +++ +  S    Q         +      SP G+ +     +
Sbjct: 402 AITPDGNTIV----SAGHKEIKLWNSKTGKQIISLPGHTQNINALAISPDGNNLV---SA 454

Query: 368 GEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G+   I V      +    L+    ++QA   S   + L+       D   K++S+ L G
Sbjct: 455 GDDKTIKVWNLQTKKLTFNLVGHQDSIQALAISQDSKILV---SAGDDKTIKVWSL-LTG 510

Query: 426 RN-ETLINTPAYASD 439
           +  +TL+    +   
Sbjct: 511 KFLKTLLGHNYWVRS 525


>gi|294625653|ref|ZP_06704275.1| dipeptidyl peptidase IV [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292600022|gb|EFF44137.1| dipeptidyl peptidase IV [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 748

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 91/279 (32%), Gaps = 69/279 (24%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+   + +        L +Y +      A +++ +        + S  G       ++
Sbjct: 116 WAPDAHALLFP---LGGELYLYDLRKTGAAAVRKLTHGEGFATDAKLSPKGGFVSFVRER 172

Query: 279 DEAMDIYSVDLQSNATERLTNTLFI-----------------NISASYSPDSSQIVFE-- 319
           +    ++ ++L S    +LT+                     +    ++PD S I F   
Sbjct: 173 N----LWVIELASGNALQLTHDGSETIGNGVAEFVADEEMDRHTGYWWAPDDSAIAFARI 228

Query: 320 ---------------------SDR---EGKE----QLYVMQSNGSDQKR---ISQDKEAS 348
                                S R    G+     QL V+        R   + ++ +  
Sbjct: 229 DEAQVPVQKRPEVYADHTEVISQRYPQAGQPNVAVQLGVIGPRAKATPRWIDLGRNPDIY 288

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMK---KDGSQERLLVEDSNLQAP-----TWSPS 400
                W      + F + S ++  + +++     G+Q  L+ E S    P      +   
Sbjct: 289 LARVDW-RDAQRLTFQRQSRDQKTLELIETTLASGAQRTLITETSPTWVPLHNDLRFLKD 347

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           GR + ++ ++ G   + LY    +GR  T + +  +  D
Sbjct: 348 GRFV-WNSERSG--YAHLYLASEDGRTLTPLTSDNWVVD 383



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 68/207 (32%), Gaps = 55/207 (26%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-------------------- 246
            P     L +P+ +P+  +V +    D D  ++ L +  I                    
Sbjct: 32  LPLSGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWEYDIASGQTRLLVDSKVVLPGTEV 91

Query: 247 -------DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ER 296
                   R  +RI  F  ++   +++ +    L  +      ++Y  DL+        +
Sbjct: 92  LSDVEKARRERQRIAAFTGIVDY-QWAPDAHALLFPL----GGELYLYDLRKTGAAAVRK 146

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--- 353
           LT+       A  SP    + F  +R     L+V++    +  +++ D   +  + V   
Sbjct: 147 LTHGEGFATDAKLSPKGGFVSFVRER----NLWVIELASGNALQLTHDGSETIGNGVAEF 202

Query: 354 -------------WSPQGDLIAFTKFS 367
                        W+P    IAF +  
Sbjct: 203 VADEEMDRHTGYWWAPDDSAIAFARID 229



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 51/309 (16%), Positives = 99/309 (32%), Gaps = 57/309 (18%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--- 217
              + +T  +G      L      VS + + +L V++    N   LT    + +      
Sbjct: 142 AAVRKLTHGEGFATDAKLSPKGGFVSFVRERNLWVIELASGNALQLTHDGSETIGNGVAE 201

Query: 218 -------------RFSPNQQKVAYATYDDEDIL---RVYLMDTRIDRAPKRIGNFRSMIL 261
                         ++P+   +A+A  D+  +    R  +     +   +R        +
Sbjct: 202 FVADEEMDRHTGYWWAPDDSAIAFARIDEAQVPVQKRPEVYADHTEVISQRYPQAGQPNV 261

Query: 262 APRFSSNGKRALIS---VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           A +    G RA  +   +      DIY   +     +RLT           S D   +  
Sbjct: 262 AVQLGVIGPRAKATPRWIDLGRNPDIYLARVDWRDAQRLTFQRQ-------SRDQKTL-- 312

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP---------QGDLIAFTKFSGE 369
                  E +    ++G+ +  I++        P W P          G  + +      
Sbjct: 313 -------ELIETTLASGAQRTLITE------TSPTWVPLHNDLRFLKDGRFV-WNSERSG 358

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR--SLIFSRKKDGDTGSKLYSIDLNGRN 427
              + +  +DG     L  D+ +     +   +  ++ F+  KDG T + LY+I L G  
Sbjct: 359 YAHLYLASEDGRTLTPLTSDNWVVDALLAVDEQAGTVYFAASKDGPTQTHLYAIPLAGGT 418

Query: 428 -ETLINTPA 435
            E    T  
Sbjct: 419 IEKRSATNG 427


>gi|158336956|ref|YP_001518131.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158307197|gb|ABW28814.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1207

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/310 (13%), Positives = 95/310 (30%), Gaps = 36/310 (11%)

Query: 113  TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             G++I  G     +   LWD + +  I+  +     A  R +A   SDD           
Sbjct: 883  QGQLIASGSGDSVIN--LWDWQQQTAILKLR--DHRAVVRSLA--FSDD----------- 925

Query: 173  FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                       ++SG    ++ + +                +F    +    +  +    
Sbjct: 926  --------GRYLISGGTDQTVRIWNWQTGRCEKTFYDHPDWVFAVALASVSGQAGWFASG 977

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
              D   V L      +    +      + +  FS + +    S   D+ + ++  D+Q+ 
Sbjct: 978  GGDP-DVRLWSVETGQCQHVLKGHSDQVWSVAFSPDHRSVA-SGSTDQTVRLW--DVQTG 1033

Query: 293  A-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               + L        S +Y PD   +   S       + +   +  +  +   D ++  F 
Sbjct: 1034 ECLQVLKGHCDRIYSIAYHPDGQILASGSQ---DHTVKLWHVDTGECLQTLTDHKSWIFA 1090

Query: 352  PVWSP-QGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSR 408
              +SP      +          I +      +  + L      + +  +SP+G+ L+   
Sbjct: 1091 VAFSPSNASQPSILASGSHDHTIKLWDVQTGKCLKTLCGHTQLVCSVAFSPNGQYLVSGS 1150

Query: 409  KKDGDTGSKL 418
            +       ++
Sbjct: 1151 QDQSVRVWEI 1160



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 86/261 (32%), Gaps = 23/261 (8%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+     ++ + D                +    FS +   +A  + D      V L D 
Sbjct: 720 VTSSEDQTIKIWDLTTGKCLQTGKGHHGRVRSVAFSHDGDYLASGSDDG----TVKLWDF 775

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLF 302
           +     +     +S + +  FS      L S   D+ + ++           +  TN +F
Sbjct: 776 QTALCLQTYEGHQSGVYSVAFSPKAP-ILASGSADQTVKLWDCQADQCLRTLQGHTNQIF 834

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S ++  D   +   +     + + +     +   R  Q         V+ PQG LIA
Sbjct: 835 ---SLAFHSDGQTLACVTL---DQTVRLWNWQTTQCLRTWQGHTDWALPVVFHPQGQLIA 888

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +        +   ++  +  +L    + +++  +S  GR LI       D   ++++  
Sbjct: 889 -SGSGDSVINLWDWQQQTAILKLRDHRAVVRSLAFSDDGRYLI---SGGTDQTVRIWN-W 943

Query: 423 LNGRNETLINTPAYASDPQWV 443
             GR E       +   P WV
Sbjct: 944 QTGRCEK-----TFYDHPDWV 959



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 61/216 (28%), Gaps = 24/216 (11%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       +    FSP+ + +A           + L   +  +        ++ I A 
Sbjct: 557 RTVFTEILGNILAATFSPDGELLATCDNH----YNIRLWQIKTGQQVTLCQGHQNWIRAI 612

Query: 264 RFSS-----NGK-RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            FS       G+   L S   D  + ++ V         L        S +++ D + + 
Sbjct: 613 SFSPQPSEIQGEGYLLASACADHTVKLWQVS-TGRCLRTLVGHTHEVFSVAFNHDGTLLA 671

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL------IAFTKFSGEKF 371
             S   G     + +++     +  +  +         PQ         +  T    +  
Sbjct: 672 SGS---GDGTAKLWRTHSGQCLQTCEGHQGWIRAVAMPPQSSSAHPPPAVMVTSSEDQTI 728

Query: 372 AIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
            I        +     +     +++  +S  G  L 
Sbjct: 729 KIW--DLTTGKCLQTGKGHHGRVRSVAFSHDGDYLA 762


>gi|302819186|ref|XP_002991264.1| hypothetical protein SELMODRAFT_236231 [Selaginella moellendorffii]
 gi|300140975|gb|EFJ07692.1| hypothetical protein SELMODRAFT_236231 [Selaginella moellendorffii]
          Length = 474

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 65/178 (36%), Gaps = 24/178 (13%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM-DRDGANIRYLTPSRDQILFEPRF 219
             ++     KGD   R++       SG    ++ +     G + +       Q++    F
Sbjct: 317 AAFKRYKVAKGDSQERLV-------SGSDDFTMYLWEPATGKHPKTRMSGHQQLVNHVYF 369

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +A A++D      V L +                +    +S++  R L+S  KD
Sbjct: 370 SPDGRWIASASFDK----SVKLWNGYTGEYVTTFRGHVGPVYQISWSAD-SRLLLSGSKD 424

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSN 334
             + ++++       + L +            +SPD  ++       G++++  +  N
Sbjct: 425 STLKVWNM----RNHKLLEDLPGHADEVFAVDWSPDGQKVA----SGGRDRVLKLWMN 474



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/286 (12%), Positives = 88/286 (30%), Gaps = 54/286 (18%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                 + +    FSP+ + +A  + D       +           K +    + +L   
Sbjct: 99  TISGHSEAVLSVSFSPDSKHLASGSGDASVRFWDISTQTPLHTCKGKMLLTCLNWVLCIA 158

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP----------- 311
           +S +G++ + S  KD  + ++  D  +       L+       + ++ P           
Sbjct: 159 WSPDGRKLV-SASKDGGIHVW--DPFTGKALGNSLSGHKSWITALTWEPAHIQSPCRRFA 215

Query: 312 ----DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
               D    V++S    ++ +  +  +      +    +   +    S    +  +    
Sbjct: 216 SASKDGDVRVWDS--SLRKSVLCLSGHTRAVTCVKWGGDGLIY--SSSQDCTIKVWETTQ 271

Query: 368 G------EKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSG--RSLIFSRKK--DGDTGS 416
           G      +  A  V     S E +L     +     ++     +   F R K   GD+  
Sbjct: 272 GKLVRELKGHAHWVNTLALSTEYVLRTGPFDHTGRAFATDEEIKEAAFKRYKVAKGDSQE 331

Query: 417 KLYSID----------LNGR--------NETLINTPAYASDPQWVG 444
           +L S              G+        ++ L+N   ++ D +W+ 
Sbjct: 332 RLVSGSDDFTMYLWEPATGKHPKTRMSGHQQLVNHVYFSPDGRWIA 377



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 47/136 (34%), Gaps = 14/136 (10%)

Query: 232 DDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   +YL +    + PK R+   + ++    FS +G+    S   D+++ ++     
Sbjct: 335 SGSDDFTMYLWEPATGKHPKTRMSGHQQLVNHVYFSPDGRWIA-SASFDKSVKLW----N 389

Query: 291 SNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
               E +T     ++      S+S DS  ++  S       L V                
Sbjct: 390 GYTGEYVTTFRG-HVGPVYQISWSADSRLLLSGSK---DSTLKVWNMRNHKLLEDLPGHA 445

Query: 347 ASYFDPVWSPQGDLIA 362
              F   WSP G  +A
Sbjct: 446 DEVFAVDWSPDGQKVA 461



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 47/154 (30%), Gaps = 9/154 (5%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           + +  L+S   D  M ++           R++    +     +SPD   I   S     +
Sbjct: 328 DSQERLVSGSDDFTMYLWE-PATGKHPKTRMSGHQQLVNHVYFSPDGRWIASASF---DK 383

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +      +     +      +   WS    L+  +        +  M+     E L 
Sbjct: 384 SVKLWNGYTGEYVTTFRGHVGPVYQISWSADSRLLL-SGSKDSTLKVWNMRNHKLLEDLP 442

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                + A  WSP G+ +        D   KL+ 
Sbjct: 443 GHADEVFAVDWSPDGQKVA---SGGRDRVLKLWM 473



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 61/180 (33%), Gaps = 25/180 (13%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-----NATERLTNT 300
           + R    I      +L+  FS + K    S   D ++  + +  Q+          LT  
Sbjct: 93  VTRCSATISGHSEAVLSVSFSPDSKHLA-SGSGDASVRFWDISTQTPLHTCKGKMLLTCL 151

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQG- 358
            ++ +  ++SPD  ++V  S   G   ++V           S     S+     W P   
Sbjct: 152 NWV-LCIAWSPDGRKLVSASKDGG---IHVWDPFTGKALGNSLSGHKSWITALTWEPAHI 207

Query: 359 ----DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKD 411
                  A     G+   + V      +  +L    + +A T   W   G  LI+S  +D
Sbjct: 208 QSPCRRFASASKDGD---VRVWDSSLRKS-VLCLSGHTRAVTCVKWGGDG--LIYSSSQD 261


>gi|196234628|ref|ZP_03133446.1| hypothetical protein CfE428DRAFT_6614 [Chthoniobacter flavus
           Ellin428]
 gi|196221297|gb|EDY15849.1| hypothetical protein CfE428DRAFT_6614 [Chthoniobacter flavus
           Ellin428]
          Length = 390

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 74/240 (30%), Gaps = 42/240 (17%)

Query: 213 ILFEPRFSPNQQK-VAYATYDDEDILRVYLMDTRIDRAP----KRIGNFRSMILAPRFSS 267
            L+ P ++P   + +        DI  V   D      P    K+ G+    I  P  S 
Sbjct: 157 PLYGPHWNPGPHRDLELLNVATGDIQTVVTADAARAAYPEWFAKQYGDQPISIFFPILSP 216

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN----------ISASYSPDSSQIV 317
           +  +    +  +   +       ++A E L                    ++ PD + IV
Sbjct: 217 DASKVFFKLASNGHTNGNPRSKGASAREGLICYSIAEKRFLFLRPSWGHPAWCPDGTTIV 276

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFSGE--KF 371
                       +  SN   + R+          P  SP G L+       KF G+   +
Sbjct: 277 -------NTAFSLTDSNTGKEHRVPGLPVCRGDHPSSSPDGKLLITDSTMDKFGGKATDW 329

Query: 372 AIGVMKKDGSQERLLVEDSNLQA-----------PTWSPSGRSLIFSRKKDGDTGSKLYS 420
            I V    G+   L ++  +              P +SP G+ + F         ++LY 
Sbjct: 330 GIIVANAQGNDY-LTLDQFDNSHGAKSWRVSHPHPVFSPDGKRIYF--NVSSGQWTQLYV 386



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 69/231 (29%), Gaps = 56/231 (24%)

Query: 220 SPNQQKVAYATYDDEDIL--RVYLMDTRIDRAPKRIGNFRS----MILAPRFSSNGKRAL 273
           SP+ + V + T    D     V + +         + N            ++ SNGKR +
Sbjct: 57  SPDGKWVLFFTSTAPDGQHGEVRIRNRATGEERVLVENLDVEDAHRAACQQWVSNGKRVV 116

Query: 274 ISVQKDEAMDIYSVDLQSNA-----TERLTNTLFIN------ISASYSPDSSQIVFESDR 322
              ++D    +  VD+ +         RL+     +          ++P           
Sbjct: 117 YHGERDGEWFVGVVDVATGKELLHIPGRLSCWGRPDGDLVPLYGPHWNP----------- 165

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-----------------SPQGDLIAF-- 363
                L ++     D + +     A    P W                 SP    + F  
Sbjct: 166 GPHRDLELLNVATGDIQTVVTADAARAAYPEWFAKQYGDQPISIFFPILSPDASKVFFKL 225

Query: 364 ---TKFSGEKFAIGVMKKDG------SQERLLVEDSNLQAPTWSPSGRSLI 405
                 +G   + G   ++G      +++R L    +   P W P G +++
Sbjct: 226 ASNGHTNGNPRSKGASAREGLICYSIAEKRFLFLRPSWGHPAWCPDGTTIV 276



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 43/93 (46%), Gaps = 12/93 (12%)

Query: 355 SPQGDLIAF---TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------TWSPSGRSLI 405
           SP G  + F   T   G+   + +  +   +ER+LVE+ +++         W  +G+ ++
Sbjct: 57  SPDGKWVLFFTSTAPDGQHGEVRIRNRATGEERVLVENLDVEDAHRAACQQWVSNGKRVV 116

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +  ++DG+    +  +   G+   L++ P   S
Sbjct: 117 YHGERDGEWFVGVVDV-ATGKE--LLHIPGRLS 146


>gi|269126758|ref|YP_003300128.1| WD-40 repeat-containing protein [Thermomonospora curvata DSM 43183]
 gi|268311716|gb|ACY98090.1| WD-40 repeat protein [Thermomonospora curvata DSM 43183]
          Length = 248

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 64/189 (33%), Gaps = 16/189 (8%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYS 310
            +      + A  FS +G+         ++  +   DL +      L        S ++S
Sbjct: 46  VLTGHTERVEAVAFSPDGRTVA----GCDSERLLMWDLATRRPTGPLAGRGDTCWSLAFS 101

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +       G E+ +V +    D        +       +SP G  +A     G  
Sbjct: 102 PDGRTLA---TGGGDEKAFVREVATGDLVATLTGHDKWIETVAFSPDGRTVATGGHDGTA 158

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRN-E 428
             +  M  + S      +   +++  +SP GR+L       G   + ++ ++  +GR   
Sbjct: 159 -RLWDMTTERSTVAGAGQLDVVESVAFSPDGRTLAI-----GARDANVHLVEAASGRPVT 212

Query: 429 TLINTPAYA 437
           TL     + 
Sbjct: 213 TLTGHDGWV 221



 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 59/192 (30%), Gaps = 13/192 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                V+G     L + D            R    +   FSP+ + +A          + 
Sbjct: 61  PDGRTVAGCDSERLLMWDLATRRPTGPLAGRGDTCWSLAFSPDGRTLA----TGGGDEKA 116

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           ++ +         +      I    FS +G+    +   D    ++ +   +     +  
Sbjct: 117 FVREVATGDLVATLTGHDKWIETVAFSPDGRTVA-TGGHDGTARLWDM---TTERSTVAG 172

Query: 300 TLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              +++  S ++SPD   +     R+    L V  ++G     ++   +       + P 
Sbjct: 173 AGQLDVVESVAFSPDGRTLA-IGARDANVHL-VEAASGRPVTTLT-GHDGWVMSVAFRPG 229

Query: 358 GDLIAFTKFSGE 369
           G  +A     G 
Sbjct: 230 GRSLATGSHDGT 241


>gi|73667712|ref|YP_303727.1| hypothetical protein Mbar_A0162 [Methanosarcina barkeri str.
           Fusaro]
 gi|72394874|gb|AAZ69147.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 387

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 79/213 (37%), Gaps = 18/213 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +K AY T    +I+ V    T    A   +GNF        FS +GK+A ++  
Sbjct: 115 AISPDGKK-AYVTSLSNNIVSVIDTATNKVTATIDVGNFP---FGVAFSPDGKKAYVTNS 170

Query: 278 KDEAMD----IYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESD--REGKEQLYV 330
             ++ +    +  +D  +NA      T   ++  ++SPD ++  V  S+   +    + +
Sbjct: 171 GGDSTNFTATVSVIDTATNAVAATIYTGNNSLEVAFSPDGTKAYVMNSNIYHDSTATILI 230

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI--GVMKKDGSQERLLVE 388
           + +  +D        +        SP G  +          ++   V   D +  ++   
Sbjct: 231 IDTTTNDVTTTVHVGDIPRGV-AVSPDGKKVYVAIQFPGPDSLTGAVNIIDTATNKVTAT 289

Query: 389 DSNLQAP---TWSPSGRSLIFSRKKDGDTGSKL 418
               +AP     +P G  + +       T S +
Sbjct: 290 VPVGRAPGGIEVTPDGTKI-YVVNYASHTVSVI 321



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/272 (13%), Positives = 93/272 (34%), Gaps = 27/272 (9%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF---- 215
           D  Y+  T  +    + +  +  + V G    +  + + +  NI  +  + +++      
Sbjct: 7   DKTYRKHTLIRVLGITSLTILILAGVVGASPFA-YITNYESNNISVIDITTNKVTATVDV 65

Query: 216 --EPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
              P     SP+ +KV Y      + + V    T       ++G     I     S +GK
Sbjct: 66  GDHPAGVTVSPDGKKV-YVVNAGSNTVSVIDTATNKVIHTVKVGTDPQRI---AISPDGK 121

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +A ++   +  +    +D  +N      +        ++SPD  +  + ++  G    + 
Sbjct: 122 KAYVTSLSNNIVS--VIDTATNKVTATIDVGNFPFGVAFSPDGKK-AYVTNSGGDSTNFT 178

Query: 331 MQSN----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG----EKFAIGVMKKDGSQ 382
              +     ++    +     +  +  +SP G   A+   S         I ++    + 
Sbjct: 179 ATVSVIDTATNAVAATIYTGNNSLEVAFSPDGTK-AYVMNSNIYHDSTATILIIDTTTND 237

Query: 383 ERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGD 413
               V   ++ +    SP G+ +  + +  G 
Sbjct: 238 VTTTVHVGDIPRGVAVSPDGKKVYVAIQFPGP 269



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 75/237 (31%), Gaps = 34/237 (14%)

Query: 115 RVIKEGKDRLRVE-----FRLWDVKDRKQIIG-------KKFFSSPASWRKIAHTISDDI 162
            V  +GK    V        + D    K I         ++   SP   +    ++S++I
Sbjct: 73  TVSPDGKKVYVVNAGSNTVSVIDTATNKVIHTVKVGTDPQRIAISPDGKKAYVTSLSNNI 132

Query: 163 YQSI---------TGEKGDF--------NSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
              I         T + G+F        + +  +V+ S        +   +     N   
Sbjct: 133 VSVIDTATNKVTATIDVGNFPFGVAFSPDGKKAYVTNSGGDSTNFTATVSVIDTATNAVA 192

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPR 264
            T        E  FSP+  K      +        ++                 I     
Sbjct: 193 ATIYTGNNSLEVAFSPDGTKAYVMNSNIYHDSTATILIIDTTTNDVTTTVHVGDIPRGVA 252

Query: 265 FSSNGKRALISVQKDEAMDI-YSVDLQSNATERLTNTLFINISA---SYSPDSSQIV 317
            S +GK+  +++Q      +  +V++   AT ++T T+ +  +      +PD ++I 
Sbjct: 253 VSPDGKKVYVAIQFPGPDSLTGAVNIIDTATNKVTATVPVGRAPGGIEVTPDGTKIY 309


>gi|74184311|dbj|BAE25694.1| unnamed protein product [Mus musculus]
          Length = 334

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G L+  + + G    I      
Sbjct: 148 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLVVSSSYDG-LCRIW-DTAS 202

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|15229187|ref|NP_190535.1| transducin family protein / WD-40 repeat family protein
           [Arabidopsis thaliana]
 gi|6723411|emb|CAB66904.1| putative WD-40 repeat-protein [Arabidopsis thaliana]
 gi|195604746|gb|ACG24203.1| hypothetical protein [Zea mays]
 gi|332645052|gb|AEE78573.1| WD40 domain-containing protein [Arabidopsis thaliana]
          Length = 317

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 85/222 (38%), Gaps = 15/222 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAP 263
               S ++ +   +FS + + +A A+ D       +  ++  I    +      + I   
Sbjct: 18  QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDR 322
            FSS+ +  + S   D+ + ++  D+++ +  + L          +++P S+ IV  S  
Sbjct: 78  AFSSDARFIV-SASDDKTLKLW--DVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF- 133

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              E + +         ++            ++  G LI  + + G    I      G  
Sbjct: 134 --DETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDG-LCRIW-DSGTGHC 189

Query: 383 ERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            + L++D N  +    +SP+G+ ++       D   +L++I 
Sbjct: 190 VKTLIDDENPPVSFVRFSPNGKFILVGTL---DNTLRLWNIS 228



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 60/170 (35%), Gaps = 14/170 (8%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFIN 304
             + + +    + + +FSS+G+    S   D+ +  Y++    D  +   +  T      
Sbjct: 16  HSQTLTSHNRAVSSVKFSSDGRLLA-SASADKTIRTYTINTINDPIAEPVQEFTGHENGI 74

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              ++S D+  IV  SD    + L +         +         F   ++PQ ++I   
Sbjct: 75  SDVAFSSDARFIVSASD---DKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSG 131

Query: 365 KFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            F      + +      +  + L      + A  ++  G  ++ S   DG
Sbjct: 132 SFDET---VRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIV-SSSYDG 177


>gi|309784261|ref|ZP_07678900.1| uncharacterized protein yidR [Shigella dysenteriae 1617]
 gi|308927768|gb|EFP73236.1| uncharacterized protein yidR [Shigella dysenteriae 1617]
          Length = 402

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 56/160 (35%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        NI   +   +P ++QI F   D  G  QL
Sbjct: 252 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNIPRHWVRCNPQATQIAFLMRDDNGIVQL 311

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 312 WLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLGN----RIACAHAQSGEVEYLTE 367

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 368 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 401



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     +   N   +  A  +  +G+     + 
Sbjct: 290 RCNPQATQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL- 348

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 349 ---GNRIACAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 401



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 6/101 (5%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            ++I F+            L ++   G   R LT ++  I     + P+ + + +     
Sbjct: 295 ATQIAFLM---RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--G 349

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             I   +     ++   +   N  S   A  FS +G+    
Sbjct: 350 NRIACAHAQSGEVEYLTENHANPPSAD-AVVFSPDGQWLAW 389


>gi|297692017|ref|XP_002823374.1| PREDICTED: aladin-like [Pongo abelii]
          Length = 486

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 95/287 (33%), Gaps = 36/287 (12%)

Query: 135 DRKQIIGKKFFSSPASWR------KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           + + + G  + S P  +R       + H   D +    T  + D  +R  F+        
Sbjct: 22  NNELVTGSSYESPPPDFRGQWINLPVLHLTKDPL---KTPGRLDHGTRTAFIHHREQVWK 78

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              ++C           L+ S    L    + P+  K A A  DD     V + +     
Sbjct: 79  RCINICP----------LSKSSSCCLRVFAWHPHTNKFAVALLDD----SVRVYNASSTI 124

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE------RLTNTLF 302
            P      +  + A  +       L    +   + I+++D  S +T       ++ +   
Sbjct: 125 VPSLKHRLQRNVAALAWKPLSASVLAVACQS-CILIWTLDPTSLSTRPSSGCAQVLSHPG 183

Query: 303 --INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S +++P   +++  S  +    + V   +      +   +     + +WSP G  
Sbjct: 184 HTPVTSLAWAPSGGRLLSASPVD--AAIRVWDVSTETCVPLPWFRGGGVTNLLWSPDGSK 241

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           I  T  S   F +   +     ER        Q   WSP G  L+F+
Sbjct: 242 ILATTPS-AVFRVWEAQMWT-CERWPTLSGRCQTGCWSPDGSRLLFT 286


>gi|301103813|ref|XP_002900992.1| WD domain-containing protein [Phytophthora infestans T30-4]
 gi|262101330|gb|EEY59382.1| WD domain-containing protein [Phytophthora infestans T30-4]
          Length = 461

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 83/247 (33%), Gaps = 23/247 (9%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            + V S  +   + V +       +        +    FSP    +A A+ D      V 
Sbjct: 26  VQQVASSSLDGLVMVWNFKPQLRAFRFKGHAGPVHTVCFSPTGDVLASASQDR----TVR 81

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---- 296
           L    +      I      + +  FS++G+  L +   D ++ ++++      T R    
Sbjct: 82  LWTPTVRGDSVTIKAHAGAVRSVSFSASGRELL-TASDDMSLKVWALP-----TRRFKCS 135

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVW 354
           LT       SA +SPD+ +I   SD    + + +  +          +     +      
Sbjct: 136 LTGHSNWVRSAQFSPDARRIASGSD---DKTVKLWDTETKRCTHTFFEHSGIINSVAFHP 192

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           S  G+ +A   +  +   +   +           +++     + P+G  L+ +     D 
Sbjct: 193 SDNGNTLASCSYD-KSVNLWDTRAGRLMHHYKAHEASATCVAFHPTGNYLLSTSH---DN 248

Query: 415 GSKLYSI 421
             KL+ +
Sbjct: 249 SIKLWDV 255



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 55/161 (34%), Gaps = 17/161 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +   +FSP+ +++A  + D      V L DT   R          +I +  F 
Sbjct: 136 LTGHSNWVRSAQFSPDARRIASGSDDK----TVKLWDTETKRCTHTFFEHSGIINSVAFH 191

Query: 267 S--NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESD 321
              NG     S   D++++++     + A   + +      SA+   + P  + ++  S 
Sbjct: 192 PSDNGNTLA-SCSYDKSVNLW----DTRAGRLMHHYKAHEASATCVAFHPTGNYLLSTSH 246

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 + +            Q  + +     +SP   L+A
Sbjct: 247 ---DNSIKLWDVREGQVLYTLQGHDGAVNCAEFSPDCKLLA 284



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 71/189 (37%), Gaps = 20/189 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + +++  A+ D    L+V+ + TR  +    +    + + + +FS + +R   S  
Sbjct: 105 SFSASGRELLTASDDMS--LKVWALPTRRFKCS--LTGHSNWVRSAQFSPDARRIA-SGS 159

Query: 278 KDEAMDIYSVDLQSNATERLTN----TLFINISASYSP--DSSQIVFESDREGKEQLYVM 331
            D+ + ++        T+R T+       I  S ++ P  + + +   S     + + + 
Sbjct: 160 DDKTVKLW-----DTETKRCTHTFFEHSGIINSVAFHPSDNGNTLASCSY---DKSVNLW 211

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            +         +  EAS     + P G+ +  T        +  +++      L   D  
Sbjct: 212 DTRAGRLMHHYKAHEASATCVAFHPTGNYLLSTSHDNS-IKLWDVREGQVLYTLQGHDGA 270

Query: 392 LQAPTWSPS 400
           +    +SP 
Sbjct: 271 VNCAEFSPD 279


>gi|242014133|ref|XP_002427752.1| WD-repeat protein, putative [Pediculus humanus corporis]
 gi|212512193|gb|EEB15014.1| WD-repeat protein, putative [Pediculus humanus corporis]
          Length = 334

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 80/224 (35%), Gaps = 16/224 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YTLKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKVWGAYDGKFEKTISGHKQGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + I+ +       + L           ++P S+ IV  S
Sbjct: 91  SDVAWSSD-SRLLVSASDDKTLKIWELS-SGKCLKTLKGHSNYVFCCDFNPQSNLIVSGS 148

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI  + + G    I      G
Sbjct: 149 F---DETVKIWDVRTGKCLKTVPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DAPSG 203

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + L++  N  +    +SP+G+ L+ +     D   KL+   
Sbjct: 204 QCLKTLIDADNPPVSFVKFSPNGKYLLAATL---DNTLKLWDYS 244


>gi|115359245|ref|YP_776383.1| coagulation factor 5/8 type domain-containing protein [Burkholderia
           ambifaria AMMD]
 gi|115284533|gb|ABI90049.1| coagulation factor 5/8 type domain protein [Burkholderia ambifaria
           AMMD]
          Length = 470

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 14/213 (6%)

Query: 225 KVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDE 280
           K+ Y +Y    D      +     R   ++      I  P    FS +GK        + 
Sbjct: 46  KLVYHSYVKYGDGTSQLFLYDFSARTLTQLSKSGWGITDPMNGVFSPDGKWLAFMGISNG 105

Query: 281 AMDIYSVDL-QSNATERLTNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQSNG-- 335
           A +++ + L        LTN+     N    ++ D   +VF+ + + K+      S G  
Sbjct: 106 AWNVFMLQLGAGTPPVNLTNSSGATRNEDPKFAADGKTLVFKQNGDVKQGTLSYTSAGPV 165

Query: 336 -SDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            +    ++     S Y  P  +P    + +   +G    +           +    + LQ
Sbjct: 166 FTSVVSLTNAPAGSEYSMPFLAPDASAVYYATGTGSNMGLMKRTIATGATAVFDHPAGLQ 225

Query: 394 --APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              P     G  + ++R KD     ++Y+   +
Sbjct: 226 TYYPIVRRDG-MVFYARWKDSGGADQIYAKTAD 257



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 82/284 (28%), Gaps = 59/284 (20%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSP 221
           QS     G    ++++    V  G   + L + D     +  L+ S   I       FSP
Sbjct: 34  QSNASFPGALTGKLVY-HSYVKYGDGTSQLFLYDFSARTLTQLSKSGWGITDPMNGVFSP 92

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKD 279
           + + +A+    +     V+++       P  + N         P+F+++GK  +     D
Sbjct: 93  DGKWLAFMGISNG-AWNVFMLQLGAGTPPVNLTNSSGATRNEDPKFAADGKTLVFKQNGD 151

Query: 280 EAMDIYSVDLQS---NATERLTNTLF--INISASYSPDSSQIVFES-------------- 320
                 S         +   LTN            +PD+S + + +              
Sbjct: 152 VKQGTLSYTSAGPVFTSVVSLTNAPAGSEYSMPFLAPDASAVYYATGTGSNMGLMKRTIA 211

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQDKE-- 346
                                           D  G +Q+Y   ++ +         +  
Sbjct: 212 TGATAVFDHPAGLQTYYPIVRRDGMVFYARWKDSGGADQIYAKTADPASTPSALPINDCM 271

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++  DP      + + F+  +   + + V      Q   L +  
Sbjct: 272 SNNSDPAPVSGTNYVFFSSTTAGGYQLYVGDVTTGQRWSLSQFG 315


>gi|119715024|ref|YP_921989.1| hypothetical protein Noca_0777 [Nocardioides sp. JS614]
 gi|119535685|gb|ABL80302.1| hypothetical protein Noca_0777 [Nocardioides sp. JS614]
          Length = 441

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 56/180 (31%), Gaps = 12/180 (6%)

Query: 264 RFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
             S +G   L++V   +     +Y  DL + A   +T    +      S D   +     
Sbjct: 227 SISGDGTTVLVAVYDGQGGVQGLYVEDLATGA---VTTVPGLGGGGDLSFDGRYVA---- 279

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKDG 380
             G +   V+         ++         P  S  G  + A+   SG    + V     
Sbjct: 280 TAGADGERVVDLETGTAVDLTPVGARITGYPSISDDGRFVTAWLLMSGGAANVWVWDVTT 339

Query: 381 SQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            +  +  L  D+  + P  S  GR ++F       T +     D    +   + + A   
Sbjct: 340 GESEVSPLGPDTYGENPRISADGRRIVFGDSNRDSTITNPVLWDRLRGDVRALTSSADVG 399



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 52/180 (28%), Gaps = 13/180 (7%)

Query: 218 RFSPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             S +   V  A YD    +  +Y+ D         +     +      S +G+    + 
Sbjct: 227 SISGDGTTVLVAVYDGQGGVQGLYVEDLATGA----VTTVPGLGGGGDLSFDGRYVATA- 281

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQI-VFESDREGKEQLYVMQSN 334
               A     VDL++     LT          S S D   +  +     G   ++V    
Sbjct: 282 ---GADGERVVDLETGTAVDLTPVGARITGYPSISDDGRFVTAWLLMSGGAANVWVWDVT 338

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             + +      +    +P  S  G  I F  +          +  +     R L   +++
Sbjct: 339 TGESEVSPLGPDTYGENPRISADGRRIVFGDSNRDSTITNPVLWDRLRGDVRALTSSADV 398



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 64/182 (35%), Gaps = 13/182 (7%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           ++T   G      L      V+    +   V+D +      LTP   +I   P  S + +
Sbjct: 258 AVTTVPGLGGGGDLSFDGRYVATAGADGERVVDLETGTAVDLTPVGARITGYPSISDDGR 317

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMD 283
            V            V++ D     +        +    PR S++G+R +     +D  + 
Sbjct: 318 FVTAWLLMSGGAANVWVWDVTTGESEVSPLGPDTYGENPRISADGRRIVFGDSNRDSTIT 377

Query: 284 IYSV-DLQSNATERLTNTLFINI--SASYSPDSSQIVFE--------SDREGKEQLYVMQ 332
              + D        LT++  +    +A+ S D+ ++           +D +G+  LY+  
Sbjct: 378 NPVLWDRLRGDVRALTSSADVGTYGTATIS-DAGRLASVLTNVAVDPADTDGRPDLYLYD 436

Query: 333 SN 334
            +
Sbjct: 437 LD 438


>gi|317503180|ref|ZP_07961241.1| dipeptidyl-peptidase IV [Prevotella salivae DSM 15606]
 gi|315665683|gb|EFV05289.1| dipeptidyl-peptidase IV [Prevotella salivae DSM 15606]
          Length = 738

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 52/156 (33%), Gaps = 27/156 (17%)

Query: 302 FINISASYSPDSSQI---VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             ++ AS S D  QI    F+S +  +    +  + G   K+        +     SP G
Sbjct: 51  GTDLYASISKDGKQIIEYAFKSGKPTRVLFDIANTQGESLKQ--------FDGYSLSPDG 102

Query: 359 DLIAFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             +     + + +         +      +   L      Q PTWSP G  + F R  + 
Sbjct: 103 KRMLIQTNTHKIYRRSSTADYYIYTIQSRKLEKLSSGGPQQIPTWSPDGNQIAFVRDNNI 162

Query: 413 DTGSKLYS-----IDLNGRNETLINTPAYASDPQWV 443
                LY      I  +G+   +IN       P WV
Sbjct: 163 FLVKLLYDNAESQITKDGKFNEIINGV-----PDWV 193



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 63/181 (34%), Gaps = 22/181 (12%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
              D++  L+     T   +    +   +   L    S +GK+ +    K         D
Sbjct: 22  MRADNKITLKDVTGQTFSPQYISGVDPIQGTDLYASISKDGKQIIEYAFKSGKPTRVLFD 81

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRIS 342
           + +   E L          S SPD  +++ +++      R      Y+        +++S
Sbjct: 82  IANTQGESLKQFDGY----SLSPDGKRMLIQTNTHKIYRRSSTADYYIYTIQSRKLEKLS 137

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK--DGSQERLLVEDSNLQ----APT 396
                    P WSP G+ IAF + +     I ++K   D ++ ++  +    +     P 
Sbjct: 138 SGGPQQI--PTWSPDGNQIAFVRDN----NIFLVKLLYDNAESQITKDGKFNEIINGVPD 191

Query: 397 W 397
           W
Sbjct: 192 W 192



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 83/245 (33%), Gaps = 50/245 (20%)

Query: 220 SPNQQKVAYATYDDEDILRV----YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           SP+ +++   T   +   R     Y + T   R  +++ +     + P +S +G +    
Sbjct: 99  SPDGKRMLIQTNTHKIYRRSSTADYYIYTIQSRKLEKLSSGGPQQI-PTWSPDGNQIAFV 157

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLF----INISASY-----SPDSSQIVFESDREGKE 326
             +D  + +  + L  NA  ++T        IN    +        +  + F +D     
Sbjct: 158 --RDNNIFLVKL-LYDNAESQITKDGKFNEIINGVPDWVNEEEFSTNRSLCFTAD---SR 211

Query: 327 QLYVMQSNGSDQKRIS----------------QDKEASYFDPVWSPQGDLI---AFTKFS 367
            +  ++ +    K  S                     +Y  P       ++   A+   S
Sbjct: 212 MICWIKYDERKVKEYSLQMFMGSHPAMKAYEVYPGAYTYKYPKAGEDNAIVSVWAYDIQS 271

Query: 368 GEKFAIGV-MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +   + V +  DG   R+   +         P+ + ++++  +  D    LY+++ +  
Sbjct: 272 HKTNRLQVPLDADGYIPRIKSTND--------PN-KVIVYTMNRHQD-VLNLYAVNPHST 321

Query: 427 NETLI 431
              LI
Sbjct: 322 LSQLI 326


>gi|149185749|ref|ZP_01864065.1| hypothetical protein ED21_22029 [Erythrobacter sp. SD-21]
 gi|148830969|gb|EDL49404.1| hypothetical protein ED21_22029 [Erythrobacter sp. SD-21]
          Length = 685

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/330 (15%), Positives = 105/330 (31%), Gaps = 48/330 (14%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV-------SGIIKN 191
           ++     ++ A  R +       +    T       SRI + + S+        +G  + 
Sbjct: 12  LLAGASIAATAQARPMTPEDVAQLESVGTIAVSPDGSRIAYTTASLPDITDGEENGSTEQ 71

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  M     N R   P  D  +    FSP+ + V++   D+++   V+ +        K
Sbjct: 72  QLK-MAYAPMNARDFLP-EDMSVSGITFSPDGRMVSFVWADEDEDRAVWGIPVDGGAQRK 129

Query: 252 RIGNFRSMILAPRFSSNGKRALI--SVQKDEAMD-------IYSVDLQSNATERLTNTLF 302
                 + + +  ++ +G R  +  S +KDEA +          V  +     RL +   
Sbjct: 130 LAAVEDADVRSFAWAPDGSRIWMLASAEKDEAREKESKAGFNAIVYEEEARLNRLFSAAA 189

Query: 303 ---INISAS------------YSPDSSQIVFES-------DREGKEQLYVMQSNGSDQKR 340
              ++                 +P     V ES       D    ++ +V+     + +R
Sbjct: 190 GTEVDGEPVAVTIPGYVSGFKVAPGGKTAVVESAPTPQIDDAYTSKRAHVIDLTSGNVQR 249

Query: 341 ISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +  +      D   SP G  ++              + ++       R L   +   A  
Sbjct: 250 VV-ETPGKLGDIEISPDGKQLSMIAGVDMNDPADTTLHLVDVASGSYRALNAGAPEAAVD 308

Query: 397 --WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             W   GR L     K   +  ++Y+ +  
Sbjct: 309 AEWLADGR-LAVVIHKGAQSALRIYNANGT 337



 Score = 43.1 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 21/130 (16%)

Query: 333 SNGSDQKRISQDKEA---SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--- 386
           +  +  + ++ +  A   S      SP G  IA+T  +     I   +++GS E+ L   
Sbjct: 19  AATAQARPMTPEDVAQLESVGTIAVSPDGSRIAYT--TASLPDITDGEENGSTEQQLKMA 76

Query: 387 ----------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT--P 434
                      ED ++   T+SP GR + F    D D    ++ I ++G  +  +     
Sbjct: 77  YAPMNARDFLPEDMSVSGITFSPDGRMVSFV-WADEDEDRAVWGIPVDGGAQRKLAAVED 135

Query: 435 AYASDPQWVG 444
           A      W  
Sbjct: 136 ADVRSFAWAP 145


>gi|326522412|dbj|BAK07668.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 323

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 82/234 (35%), Gaps = 29/234 (12%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +R       + +   +FSP+ + +A A+ D      + +  +        +      
Sbjct: 14  GYALRATLAGHRRAVSAVKFSPDGRLLASASADK----LLRVWSSADLSPVAELEGHEEG 69

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQ 315
           +    FS +G+    S   D  + I+ +     A  RL  TL  + +     ++SP  + 
Sbjct: 70  VSDLSFSPDGRLLA-SASDDRTVRIWDLGAGGGA--RLVKTLAGHTNYAFCVAFSPHGNV 126

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +   S     E + V +       R+            +   G +I    + G      +
Sbjct: 127 LASGSF---DETVRVWEVRSGRSLRVLPAHSEPVTAVDFDRDGAMIVSGSYDG---LCRI 180

Query: 376 MKKDGSQ-ERLLVEDSNLQAP-----TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                    + L++D   ++P      +SP+G+ ++ S     D+  +L++   
Sbjct: 181 WDAATGHCVKTLIDD---ESPPVSYSKFSPNGKFVLASTL---DSTLRLWNFSA 228


>gi|195176101|ref|XP_002028688.1| GL25365 [Drosophila persimilis]
 gi|194110585|gb|EDW32628.1| GL25365 [Drosophila persimilis]
          Length = 413

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 76/224 (33%), Gaps = 20/224 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  + + RFSP   ++A ++ D      V L + +      R G+  S +    +S
Sbjct: 14  FTGLSGSITQLRFSPEGSQIATSSLDG----SVILWNLKQASRCIRFGSHSSAVYGVAWS 69

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             G     S   D ++ I+   ++  + E          S  + P    ++  SD +   
Sbjct: 70  PKGNLVA-SAGHDRSVKIWEPKVRGVSGE-FAAHSKPVRSIDFDPTGQMMLTASD-DKSV 126

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +++ +      Q   S  ++ ++     +SP G +IA    + +   I  +        +
Sbjct: 127 KIWRVA---KRQFLSSFSQQTNWVRAAKFSPNGKMIATVS-NDKSLRIYDVNTGECTRTI 182

Query: 386 LVEDSNLQAPTWSPSGRSLIFSR--------KKDGDTGSKLYSI 421
             E    +   W P G  +  +            G    +LY +
Sbjct: 183 TEERGAPRQVAWHPWGNMVAVALGCNRIKIFDVGGSQLLQLYVV 226



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 70/202 (34%), Gaps = 25/202 (12%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +        I   RFS  G +   +   D ++ ++++   S    R  +        ++S
Sbjct: 12  RHFTGLSGSITQLRFSPEGSQIA-TSSLDGSVILWNLKQASRCI-RFGSHSSAVYGVAWS 69

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS----PQGDLIAFTKF 366
           P  + +   +  +   +++        + R    + A++  PV S    P G  +  T  
Sbjct: 70  PKGNLVA-SAGHDRSVKIW------EPKVRGVSGEFAAHSKPVRSIDFDPTGQ-MMLTAS 121

Query: 367 SGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +   I  +    ++ + L     + + ++A  +SP+G+ +        D   ++Y ++
Sbjct: 122 DDKSVKIWRV----AKRQFLSSFSQQTNWVRAAKFSPNGKMIATVSN---DKSLRIYDVN 174

Query: 423 LNGRNETLINTPAYASDPQWVG 444
                 T+           W  
Sbjct: 175 TGECTRTITEERGAPRQVAWHP 196


>gi|6647885|sp|Q44156|TOLB_ACTPL RecName: Full=Protein tolB
 gi|1405435|emb|CAA61412.1| orf [Actinobacillus pleuropneumoniae]
          Length = 84

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/71 (19%), Positives = 27/71 (38%), Gaps = 3/71 (4%)

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPA 435
                   +L      ++P+ SP+G  +I+S  K      +L  +  +GR +  L     
Sbjct: 14  DLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKGTSKVLQL--VSADGRFKANLPGAGG 71

Query: 436 YASDPQWVGFM 446
               P W  ++
Sbjct: 72  QFKFPAWSPYL 82



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
            P  SP G ++ ++   G    + ++  DG  +  L       + P WSP
Sbjct: 31  SPSISPNGIMVIYSSTKGTSKVLQLVSADGRFKANLPGAGGQFKFPAWSP 80



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 36/69 (52%), Gaps = 2/69 (2%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           DL S  TE L++T F++ S S SP+   +++ S +   + L ++ ++G  +  +      
Sbjct: 14  DLASGGTEVLSST-FLDESPSISPNGIMVIYSSTKGTSKVLQLVSADGRFKANL-PGAGG 71

Query: 348 SYFDPVWSP 356
            +  P WSP
Sbjct: 72  QFKFPAWSP 80



 Score = 37.3 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 26/78 (33%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           + IL++  +   +      + +   +  +P  S NG   + S  K  +  +  V      
Sbjct: 3   KQILQIITILPDLASGGTEVLSSTFLDESPSISPNGIMVIYSSTKGTSKVLQLVSADGRF 62

Query: 294 TERLTNTLFINISASYSP 311
              L          ++SP
Sbjct: 63  KANLPGAGGQFKFPAWSP 80


>gi|254412179|ref|ZP_05025954.1| RIO1 family [Microcoleus chthonoplastes PCC 7420]
 gi|196181145|gb|EDX76134.1| RIO1 family [Microcoleus chthonoplastes PCC 7420]
          Length = 612

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 95/264 (35%), Gaps = 33/264 (12%)

Query: 182 ESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +++VSG    S+ +   R G  +  LT    ++      SPN Q +A  +YD      + 
Sbjct: 346 KTLVSGSYDKSIKLWALRLGKPLHNLTGHSHRVTCV-AISPNGQILASGSYDK----TIK 400

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L      +    + +    +    FS NG+  ++    D  + +++V  ++    R+   
Sbjct: 401 LWSLSTGKLLNTLVSRADRVRGIVFSPNGQ--ILISSGDCEIKLWAV--RTGKLLRILAG 456

Query: 301 LFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              +    +++PDS      S       L +   +         ++  S     +SP G 
Sbjct: 457 NSNSARHIAFNPDSHSCAVGSL---NGTLELWNPHNGKPLMTFTNQSTSITCLEFSPDGL 513

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKDGDT 414
           ++A    SG   AI +      +   L+     ++P      +SP  + L          
Sbjct: 514 ILA----SGSSRAITLWNPQSGK---LLRTFAPESPGVAALAFSPDSQVLA----SGSGA 562

Query: 415 GSKLYSIDLNGRNETLINTPAYAS 438
             +L+ +  NG  + L     +A 
Sbjct: 563 LIELWDV-QNG--QRLTKLSGHAQ 583



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/210 (14%), Positives = 63/210 (30%), Gaps = 15/210 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R         +     SP+ + +   +YD      + L   R+ +    +      +  
Sbjct: 325 LRRTLSGHTDEIRAIAISPDGKTLVSGSYDK----SIKLWALRLGKPLHNLTGHSHRVTC 380

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              S NG + L S   D+ + ++S+         L +         +SP+   ++     
Sbjct: 381 VAISPNG-QILASGSYDKTIKLWSLS-TGKLLNTLVSRADRVRGIVFSPNGQILI----S 434

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGS 381
            G  ++ +         RI      S     ++P     A    +G    + +    +G 
Sbjct: 435 SGDCEIKLWAVRTGKLLRILAGNSNSARHIAFNPDSHSCAVGSLNGT---LELWNPHNGK 491

Query: 382 QERLLVEDSNLQAP-TWSPSGRSLIFSRKK 410
                   S       +SP G  L     +
Sbjct: 492 PLMTFTNQSTSITCLEFSPDGLILASGSSR 521


>gi|70991260|ref|XP_750479.1| chromosome segregation protein (SepB) [Aspergillus fumigatus Af293]
 gi|66848111|gb|EAL88441.1| chromosome segregation protein (SepB), putative [Aspergillus
           fumigatus Af293]
 gi|159130952|gb|EDP56065.1| chromosome segregation protein (SepB), putative [Aspergillus
           fumigatus A1163]
          Length = 841

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/274 (18%), Positives = 92/274 (33%), Gaps = 23/274 (8%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           T+SDD       +  D N  ++  ++S + G    ++         +  L       + +
Sbjct: 43  TVSDDGEPKTIDDGVDGNLGVVATNDSFIMGAEDGTVWKYGIGSGKMEQLLVRCALPVRD 102

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              S + + VA A+    D L V +++       K +           F  NG+   +S 
Sbjct: 103 LAISKDGEWVAVAS----DELTVKIVNIEDMTKVKYLREQAKGTKHVSFDPNGRYIAVSC 158

Query: 277 QKDEAMDIYSVDLQ--------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
             D  + IYS  L+             RL          ++ PD +     ++      +
Sbjct: 159 T-DGLLYIYSTFLEEPELVRKLDGVIRRLEAEDEATAKIAWHPDGTAFA-AAEVTRDIGI 216

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y +      +K  S           WSP G L+A    +G    I + +    Q     +
Sbjct: 217 YTVS-EWKKEKVFSGGHNGDITSVSWSPNGALLA---TAGADGKILIWETKTQQVLHRYD 272

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +N+    W P+  SL F+         +L+  D
Sbjct: 273 FANVINLAWHPTNNSLSFTTSDG-----ELFIYD 301


>gi|284036655|ref|YP_003386585.1| hypothetical protein Slin_1741 [Spirosoma linguale DSM 74]
 gi|283815948|gb|ADB37786.1| hypothetical protein Slin_1741 [Spirosoma linguale DSM 74]
          Length = 977

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 72/178 (40%), Gaps = 5/178 (2%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISV 276
             S N  K+      D+   ++ ++D++     ++I N        PR+  + +  ++  
Sbjct: 413 ALSLNNTKLVAVDNTDQFRTQLLVLDSQTGAVQQKIPNPTGAFYQHPRWKEDNRTLVVVS 472

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +    I ++D +S +   L   +  NIS      D   +++ S R G + +Y + +  
Sbjct: 473 LNNGKKTIQAIDTESGSVTDLLPQVSENISNPQPWKD--YVLYNSPRSGIDNIYALDTRS 530

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
               +++    A+Y     SP G+ +AF  F+   + I  M    +  + + E    Q
Sbjct: 531 KQVFQVTSRPLAAYHA-TLSPSGNRLAFEDFTANGYRIVDMPVTPADWKPVSEPGQEQ 587



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 62/162 (38%), Gaps = 4/162 (2%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           +   +  L V+D + GA  + +          PR+  + + +   + ++     +  +DT
Sbjct: 427 TDQFRTQLLVLDSQTGAVQQKIPNPTGAFYQHPRWKEDNRTLVVVSLNNGK-KTIQAIDT 485

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                   +      I  P+        L +  +    +IY++D +S    ++T+     
Sbjct: 486 ESGSVTDLLPQVSENISNPQ--PWKDYVLYNSPRSGIDNIYALDTRSKQVFQVTSRPLAA 543

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
             A+ SP  +++ FE       ++  M    +D K +S+  +
Sbjct: 544 YHATLSPSGNRLAFEDFTANGYRIVDMPVTPADWKPVSEPGQ 585



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 66/177 (37%), Gaps = 24/177 (13%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           PR+   G+R           +I  ++LQ+    RLT       + + S +++++V   + 
Sbjct: 380 PRW---GQRIY--------SNIRLLNLQTGKLTRLT-HRARYTAVALSLNNTKLVAVDNT 427

Query: 323 EG-KEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +  + QL V+ S     ++ I     A Y  P W      +     +  K  I  +  + 
Sbjct: 428 DQFRTQLLVLDSQTGAVQQKIPNPTGAFYQHPRWKEDNRTLVVVSLNNGKKTIQAIDTES 487

Query: 381 SQER----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                    + E+ +   P W      ++++  + G     +Y++D   +    + +
Sbjct: 488 GSVTDLLPQVSENISNPQP-W-KD--YVLYNSPRSG--IDNIYALDTRSKQVFQVTS 538


>gi|116625885|ref|YP_828041.1| WD40 domain-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229047|gb|ABJ87756.1| WD40 domain protein beta Propeller [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 180

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 47/162 (29%), Gaps = 6/162 (3%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRA---PKRIGNFRSMILAPRFSSNGKRALIS 275
           +SP+Q+ + Y     E    ++  +   D     P            PRFS +G+     
Sbjct: 4   WSPDQRFLIYEVESPETQSDLFYRERGKDGKLGEPVVYLKTPFRERQPRFSPDGRFVAYI 63

Query: 276 VQKDEAMDIYSVD-LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             +    +IY           R++      ++  +  D  +I +             Q  
Sbjct: 64  SNESGGPEIYVRQFPNGANKVRISTHRG--VAPRWRQDGKEIFYAEQNNLMAVTVTTQPV 121

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            S    +   + AS  +   S  G      +       + + 
Sbjct: 122 FSSANPVRSFQNASLPNYDASADGKRFIVMEKPPAGSPLAIH 163



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 39/107 (36%), Gaps = 4/107 (3%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFT 364
           +SPD   +++E +    +     +  G D    +  +          P +SP G  +A+ 
Sbjct: 4   WSPDQRFLIYEVESPETQSDLFYRERGKDGKLGEPVVYLKTPFRERQPRFSPDGRFVAYI 63

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                   I V +      ++ +      AP W   G+ + ++ + +
Sbjct: 64  SNESGGPEIYVRQFPNGANKVRISTHRGVAPRWRQDGKEIFYAEQNN 110



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 4/107 (3%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + R L                   +DG      +         +PRFSP+ + VAY + +
Sbjct: 7   DQRFLIYEVESPETQSDLFYRERGKDGKLGEPVVYLKTPFRERQPRFSPDGRFVAYISNE 66

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                 +Y+          RI   R +  APR+  +GK    + Q +
Sbjct: 67  SGGP-EIYVRQFPNGANKVRISTHRGV--APRWRQDGKEIFYAEQNN 110



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 10/97 (10%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL------LVEDSNLQAPTWSPSGRSLIF 406
            WSP    + +   S E  +    ++ G   +L      L      + P +SP GR + +
Sbjct: 3   DWSPDQRFLIYEVESPETQSDLFYRERGKDGKLGEPVVYLKTPFRERQPRFSPDGRFVAY 62

Query: 407 SRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQW 442
              + G  G ++Y     NG N+  I+T    + P+W
Sbjct: 63  ISNESG--GPEIYVRQFPNGANKVRISTHRGVA-PRW 96


>gi|219848264|ref|YP_002462697.1| WD-40 repeat-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219542523|gb|ACL24261.1| WD-40 repeat protein [Chloroflexus aggregans DSM 9485]
          Length = 437

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 68/199 (34%), Gaps = 17/199 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+QQ +A  + D +    + L      +  + + +    I A  FS +G+R   + +
Sbjct: 160 AFSPDQQTLATGSLDGK----LRLWRWSDGQLQRVLSSRIDEINAVAFSPDGQRIAAAGR 215

Query: 278 KDEAMDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +D  + ++ V         L N        S ++ P+   I           +++  +  
Sbjct: 216 QDG-VQVWRV-ADGEPLLYLRNDQRHGALFSVAFQPNGDLIAAT---GWAPVIWLWNATD 270

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-- 393
                     E       + P GDL+      G+   + + +         +   + +  
Sbjct: 271 GSVSGGLSGHEGFINSLAFHPGGDLLL---SGGQDRIVRLWRIPDRSLVREMHGHDDEIL 327

Query: 394 APTWSPSGRSLIFSRKKDG 412
           +  +S  G  L  S   DG
Sbjct: 328 SVAFSADGE-LAASASADG 345



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 76/236 (32%), Gaps = 16/236 (6%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           + +  S   K  L     DG   R L+   D+I     FSP+ Q++A      +D ++V+
Sbjct: 167 TLATGSLDGKLRLWRW-SDGQLQRVLSSRIDEINAV-AFSPDGQRIA--AAGRQDGVQVW 222

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTN 299
            +         R       + +  F  NG     +     A  I+  +    +    L+ 
Sbjct: 223 RVADGEPLLYLRNDQRHGALFSVAFQPNGDLIAAT---GWAPVIWLWNATDGSVSGGLSG 279

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                 S ++ P    ++      G++++  + +       R     +       +S  G
Sbjct: 280 HEGFINSLAFHPGGDLLL----SGGQDRIVRLWRIPDRSLVREMHGHDDEILSVAFSADG 335

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           +L A     G      V      Q  L        +  +SP  R L      DG T
Sbjct: 336 ELAASASADGVIIVWQVAHWQPVQM-LPSYAGACSSLAFSPDNRYLA--SAHDGRT 388


>gi|312129100|ref|YP_003996440.1| peptidase s9b dipeptidylpeptidase iv domain protein [Leadbetterella
           byssophila DSM 17132]
 gi|311905646|gb|ADQ16087.1| peptidase S9B dipeptidylpeptidase IV domain protein [Leadbetterella
           byssophila DSM 17132]
          Length = 783

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/267 (12%), Positives = 88/267 (32%), Gaps = 24/267 (8%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK--VAYA 229
                +  ++   + GI      + D      +     R      P +SP+     +A  
Sbjct: 289 IAKDTVFKINLKDIPGIEDEPQYLADY-PDRPKSKNKVRSVSFQNPVWSPDATYAVIAIR 347

Query: 230 TYDDEDILRVYLMDTRIDRAP----------KRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + D++D   + L       +P             G       +     +        ++ 
Sbjct: 348 SNDNKDRWIMKLDGETGKLSPIDRQHDEAWIAGPGIGGGFGGSGIGFIDEHTLYFQSEET 407

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--REGKEQLYVMQSNGSD 337
               +Y+ D+++   + LT+  F   +   S D       ++    G++  Y M  NG +
Sbjct: 408 GYSHVYTYDMRTGTKKALTSGNFEVQTLELSKDKQWFYMTTNEVHPGEKHFYKMSVNGGE 467

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKD-GSQERLLVEDSNLQAP 395
           + +++     +  +   SP   +IA     +   + + +     G+    +   +     
Sbjct: 468 RIKLTSMTGGN--EVTLSPDEKMIAIRYSNANTPWELYLQPATPGAVAEKITSSTTAAFN 525

Query: 396 TWS---PSGRSLIFSRKKDGDTGSKLY 419
            ++   P  + + F+ +   +  +++Y
Sbjct: 526 AYAWKMP--QVISFTARDGKEIYARVY 550



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 62/153 (40%), Gaps = 21/153 (13%)

Query: 301 LFINISAS---YSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            +I  S S   +S DS  I F  + E    + LY +       +++S+ ++ S     + 
Sbjct: 32  KWIGTSPSNIFWSEDSKTIYFNWNPEQNRADSLYKITLTNRTPQKVSRAEKESLGLSGF- 90

Query: 356 PQGDLIAFTK-FSGEKF----AIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRK 409
             G   A++K F  + +     I +       ER L    + + + ++S   + +IF+  
Sbjct: 91  --GRSAAYSKDFRKKLYLKNGNIFIQDTGTLAERQLTNTLDRKGSLSFSKDEKHVIFT-- 146

Query: 410 KDGDTGSKLYSIDL-NGRNETLINTPAYASDPQ 441
                G+ +Y+I L +G  +   N       P+
Sbjct: 147 ----MGNDIYTIALADGTLQQWTNFSMENRRPE 175



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 58/144 (40%), Gaps = 18/144 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-------N 255
            +++  S   I     +S + + + +    +++        T  +R P+++         
Sbjct: 31  AKWIGTSPSNIF----WSEDSKTIYFNWNPEQNRADSLYKITLTNRTPQKVSRAEKESLG 86

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                 +  +S + ++ L      +  +I+  D  + A  +LTNTL    S S+S D   
Sbjct: 87  LSGFGRSAAYSKDFRKKLY----LKNGNIFIQDTGTLAERQLTNTLDRKGSLSFSKDEKH 142

Query: 316 IVFESDREGKEQLYVMQSNGSDQK 339
           ++F     G +   +  ++G+ Q+
Sbjct: 143 VIFT---MGNDIYTIALADGTLQQ 163


>gi|302909062|ref|XP_003049991.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256730928|gb|EEU44278.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 890

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 98/242 (40%), Gaps = 25/242 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D  NI  L+ S++ I F    + + + +A+       +L V+   +      K+ G+F 
Sbjct: 289 PDFNNIHKLSISQNDIDFV-TINKSGEWLAFGASKLGQLL-VWEWQSE-SYILKQQGHFD 345

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQI 316
           SM     +S +G+R  I+   D  + ++  D+QS       T       +  ++   + +
Sbjct: 346 SMNSL-VYSPDGQRI-ITTADDGKIKVW--DIQSGFCIVTFTEHTSGVTACEFAKKGN-V 400

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +F S  +G  + + +     + +  +     S+      P G+++A        F I + 
Sbjct: 401 LFTSSLDGSIRAWDL-IRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSLD--SFDIHIW 457

Query: 377 KKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                  +LL + S  + P     ++P+G SL+       D  ++++SI     N T  +
Sbjct: 458 SVQTG--QLLDQLSGHEGPVSSLAFAPNGSSLVSGSW---DRTARIWSI----FNRTQTS 508

Query: 433 TP 434
            P
Sbjct: 509 EP 510


>gi|123478962|ref|XP_001322641.1| Erythrocyte membrane-associated giant protein antigen 332 containing
            protein [Trichomonas vaginalis G3]
 gi|121905491|gb|EAY10418.1| Erythrocyte membrane-associated giant protein antigen 332 containing
            protein [Trichomonas vaginalis G3]
          Length = 2792

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/300 (17%), Positives = 98/300 (32%), Gaps = 54/300 (18%)

Query: 160  DDIY-QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            D+IY   I    G F ++ +  + +            ++ DG+    +  +   +L    
Sbjct: 1820 DEIYTAKIIKPDGTFFTKTVNANGTSPE-------RFINADGSVTERVIRANGTLLE--- 1869

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
                      + YD +  L    +       P +  N    I       +G    I +  
Sbjct: 1870 ----------SVYDKDGKLLSQRIINHDGTNPTKSINEDGTITMLIRRPDGTILEILLNH 1919

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D      + +     TER+T    I I    +PD S     S+R       ++  +GSD 
Sbjct: 1920 DGTAPKRTQNPDGTFTERITRADGIIIERIVNPDGSI---VSER-------LLNQDGSDP 1969

Query: 339  KRISQDK----------EASYFDPVWSPQGDLIA------------FTKFSGEKFAIGVM 376
            +RI+             +    +   +P G +++                        + 
Sbjct: 1970 ERITNSDGTITEKLKKADGVIVERTLNPDGTVLSERLLNADGTAPQRITNQDGTITEKIK 2029

Query: 377  KKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            K DGS  ERLL  D           GR  + +++ DG    ++   D +  +E+L+N   
Sbjct: 2030 KADGSIFERLLNADGTTSPVLIHEDGRMTVTAKRADGIIIKRILRPDGSIESESLLNANG 2089



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 48/305 (15%), Positives = 96/305 (31%), Gaps = 8/305 (2%)

Query: 133  VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV--SESVVSGIIK 190
            V     I  K F        +   +    I +    + G F  +I+    +    +    
Sbjct: 784  VAKDGTITEKLFSKDGQLLAQKTISSDGTISERKYNKDGSFKEKIIKPDGTIQERTVNSD 843

Query: 191  NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             ++  +   GA  R +           R   +   +      D  I    L++      P
Sbjct: 844  GTIQEIAASGATKRVVNEDGSVTEKFVRI--DGTILERTVNPDGTIQSERLLNAD-GTVP 900

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            +R+ N    I      ++G      +  D  +   SV      +E++T           +
Sbjct: 901  ERVNNADGSITENVIRADGSILERILNHDGTIPQKSVTQDGTISEKVTVGPNATKERFLN 960

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             D +        +G  Q  + +++G   +R      A  +   ++  G     ++     
Sbjct: 961  ADGTVPEKNVQPDGTSQEKLFRADGVMIERTIGPNGALKYKRYFNHDGSNPEKSQNPNGT 1020

Query: 371  FAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                V++ DGS  ER+L  D      +++  G +     +KDG      Y +  +G N  
Sbjct: 1021 ITQKVLRPDGSVYERILNGDGTNPIRSFNNDGTTTEKVTRKDGRAVE--YHLSHDGTNSI 1078

Query: 430  LINTP 434
                P
Sbjct: 1079 RTPNP 1083



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 50/289 (17%), Positives = 113/289 (39%), Gaps = 22/289 (7%)

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR----------DQI 213
            + IT   G    RI+    S+VS        ++++DG++   +T S           D +
Sbjct: 1936 ERITRADGIIIERIVNPDGSIVSER------LLNQDGSDPERITNSDGTITEKLKKADGV 1989

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            + E   +P+   V      + D      +  +     ++I      I     +++G  + 
Sbjct: 1990 IVERTLNPDG-TVLSERLLNADGTAPQRITNQDGTITEKIKKADGSIFERLLNADGTTSP 2048

Query: 274  ISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            + + +D  M + +        +R L     I   +  + + ++    ++ +G   + V+ 
Sbjct: 2049 VLIHEDGRMTVTAKRADGIIIKRILRPDGSIESESLLNANGTEPTVTTNADGTTTIRVVN 2108

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSN 391
             +G   +R+     +   + + +  G +    +         ++ KDG+  ERLL  D +
Sbjct: 2109 KDGIIVERVLNPDGSVKSERLLNADGSVPERVENEDGTLTEKLIGKDGTIIERLLNADGS 2168

Query: 392  LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASD 439
            +    ++P G  +   R KDG    K  +I  +G  ++ L+N    A++
Sbjct: 2169 VPTKIFNPDGTVMERIRGKDGKFIEK--TIRPDGIISQRLVNADGSATE 2215



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 103/302 (34%), Gaps = 60/302 (19%)

Query: 164  QSITGEKGDFNSRIL-----FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            + +T E G +  +I+      +  +        S  +++ DG   + +            
Sbjct: 1168 ERVTNEDGSYVEKIVKGDGTILERTCNKDNSVKSERLLNHDGTEPKKVIN---------- 1217

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
               +   +A  +  D  +L V+        A   +              +G  A   V+ 
Sbjct: 1218 --LDGTILASVSKKDGSVLDVFYNADGTPTAKVHLH-------------DGTIAEKIVRS 1262

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D  +    ++   +   R  N+L I  +     D +      +R G     ++ +NG+  
Sbjct: 1263 DGTILERILNHDGSVPSRTPNSLGIYTAKIIKKDGNTAAKIVNRNGTTPDKLLNANGTTT 1322

Query: 339  KRISQDKEASYFDPVWSPQG-----DLIAFTKFSGEKFAIG-------VMKKDGSQE-RL 385
            +RI +D E   F+ + +P G      L+ +      +  I        +++ DG+   RL
Sbjct: 1323 ERIVRDDE-IIFERILNPDGSLKYERLLNWDGTVPTRHVISDGRIIELLVRPDGTTVGRL 1381

Query: 386  LVEDSNLQAPT---WS----------PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            L  D     P+   +S          P G  +  +   DG   S+ Y ++ +G     I 
Sbjct: 1382 LNPDGT--EPSRKTFSDRTTTAVIVRPDGIIVERTLNADGTIKSERY-LNADGSEPERIV 1438

Query: 433  TP 434
             P
Sbjct: 1439 NP 1440



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 97/307 (31%), Gaps = 28/307 (9%)

Query: 155  AHTISDDIYQSITGEKGDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPS 209
            A      I + I    G   S  L  +         +     ++ V+++DG  +  +   
Sbjct: 2061 AKRADGIIIKRILRPDGSIESESLLNANGTEPTVTTNADGTTTIRVVNKDGIIVERVLNP 2120

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +  E   + +         ++ED      +  +     +R+ N    +    F+ +G
Sbjct: 2121 DGSVKSERLLNADGSVP--ERVENEDGTLTEKLIGKDGTIIERLLNADGSVPTKIFNPDG 2178

Query: 270  KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS--QIVFESD------ 321
                    KD      ++      ++RL N          + D    + V+ SD      
Sbjct: 2179 TVMERIRGKDGKFIEKTIRPDGIISQRLVNADGSATEKVVTKDGKILEKVYGSDGKLQVE 2238

Query: 322  ----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                 +G          G   +      + S  + + +  G  I  T            +
Sbjct: 2239 LVISNDGSINKTFYNPEGKVVRTKHVLPDGSIKERINNDDGTCIERTVAKDGTVTERRYE 2298

Query: 378  KDGS-QERLLVEDSNLQAPTWSPSGRS---LIFSRKKDGDTGSKLYSIDLNGR-NETLIN 432
            KDGS  E+++ +D  +   T+SP G+    + F      D     +  + +G   E  ++
Sbjct: 2299 KDGSYTEKIISKDGTITEKTYSPDGKVQKEISFFT----DGSYSEWIRNPDGTFTERKVS 2354

Query: 433  TPAYASD 439
               Y+ +
Sbjct: 2355 KDGYSVE 2361



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 65/407 (15%), Positives = 118/407 (28%), Gaps = 69/407 (16%)

Query: 67   EVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLV-------TGRVIKE 119
             VV++D   ++ F  I   +  ++  NPD   + +    L A   V        G + + 
Sbjct: 857  RVVNEDGSVTEKFVRID-GTILERTVNPDGTIQSE--RLLNADGTVPERVNNADGSITEN 913

Query: 120  ---GKDRLRVEFRLWD-------VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ----- 164
                   +       D       V     I  K      A+  +  +  +D         
Sbjct: 914  VIRADGSILERILNHDGTIPQKSVTQDGTISEKVTVGPNATKERFLN--ADGTVPEKNVQ 971

Query: 165  --SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
                + EK      ++       +G +K      + DG+N    + + +  + +    P+
Sbjct: 972  PDGTSQEKLFRADGVMIERTIGPNGALKYKRY-FNHDGSNPE-KSQNPNGTITQKVLRPD 1029

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                 Y    + D              P R  N            +G+     +  D   
Sbjct: 1030 GS--VYERILNGD-----------GTNPIRSFNNDGTTTEKVTRKDGRAVEYHLSHDGTN 1076

Query: 283  DIYSVDLQSNATERLTNTLFINISASYSPDS---SQIVFESD------------------ 321
             I + +     TE  T    I +    +PD    S+ +F +D                  
Sbjct: 1077 SIRTPNPDRTITETYTRNDGIVVKRILTPDEILKSEQLFSADGTPAKKTTLPDGSTKELY 1136

Query: 322  --REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               +G      +  +G  +  ++ +K+ S  + V +  G  +                KD
Sbjct: 1137 NKVDGTLLERTISPDGIVKSEVTLNKDGSAPERVTNEDGSYVEKIVKGDGTILERTCNKD 1196

Query: 380  GS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             S   ERLL  D        +  G  L    KKDG      Y+ D  
Sbjct: 1197 NSVKSERLLNHDGTEPKKVINLDGTILASVSKKDGSVLDVFYNADGT 1243



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 94/291 (32%), Gaps = 38/291 (13%)

Query: 104  NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
              +     +   V K+    L V                 F+++  +     H     I 
Sbjct: 1214 KVINLDGTILASVSKKDGSVLDV-----------------FYNADGTPTAKVHLHDGTIA 1256

Query: 164  QSITGEKGDFNSRIL----FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            + I    G    RIL     V     + +   +  ++ +DG N      +R+    +   
Sbjct: 1257 EKIVRSDGTILERILNHDGSVPSRTPNSLGIYTAKIIKKDG-NTAAKIVNRNGTTPDKLL 1315

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            + N         DDE I    +++       +R+ N+   +      S+G+   + V+ D
Sbjct: 1316 NANGTTTERIVRDDEIIFER-ILNPDGSLKYERLLNWDGTVPTRHVISDGRIIELLVRPD 1374

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDS--SQIVFESDREGKEQLYVMQSNGSD 337
                   ++       R T +     +    PD    +    +D   K + Y + ++GS+
Sbjct: 1375 GTTVGRLLNPDGTEPSRKTFSDRTTTAVIVRPDGIIVERTLNADGTIKSERY-LNADGSE 1433

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             +RI             +P G ++   K +       ++  DG+  +  V 
Sbjct: 1434 PERI------------VNPDGTILEKVKRADGTILEKLLNADGTYPKRTVN 1472



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 49/276 (17%), Positives = 103/276 (37%), Gaps = 31/276 (11%)

Query: 80   NLISQDSFK-QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
             ++++D    +++ NPD   + +    L A   V  RV  E    L  +     +     
Sbjct: 2105 RVVNKDGIIVERVLNPDGSVKSE--RLLNADGSVPERVENE-DGTLTEKL----IGKDGT 2157

Query: 139  IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL----FVSESVVSGIIKNSLC 194
            II ++  ++  S           + + I G+ G F  + +     +S+ +V+     +  
Sbjct: 2158 II-ERLLNADGSVPTKIFNPDGTVMERIRGKDGKFIEKTIRPDGIISQRLVNADGSATEK 2216

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            V+ +DG  +  +  S  ++  E   S +   +    Y+ E  +             +RI 
Sbjct: 2217 VVTKDGKILEKVYGSDGKLQVELVISNDGS-INKTFYNPEGKVVRTKHVLPDGSIKERIN 2275

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS- 313
            N            +G     +V KD  +     +   + TE++ +        +YSPD  
Sbjct: 2276 ND-----------DGTCIERTVAKDGTVTERRYEKDGSYTEKIISKDGTITEKTYSPDGK 2324

Query: 314  --SQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKE 346
               +I F +D  G    ++   +G+  +R +S+D  
Sbjct: 2325 VQKEISFFTD--GSYSEWIRNPDGTFTERKVSKDGY 2358



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 55/140 (39%), Gaps = 3/140 (2%)

Query: 268  NGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G    + V+ D  +   + +      ++RL N    N       D S ++     +G  
Sbjct: 1619 DGTTTELVVKADGIIIERTTNADGTIKSDRLLNADGSNPEEKKLEDGSTVIIVKRADGTV 1678

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QER 384
                +  +GS +  ++++ + +  + + +  G +    + +          +DG+  +ER
Sbjct: 1679 LERTLNPDGSIKSDVTRNADDTAPEQITNEDGTITEKIRRADGVIIERTYNQDGTVKKER 1738

Query: 385  LLVEDSNLQAPTWSPSGRSL 404
            LL  D ++     +P G  L
Sbjct: 1739 LLNHDGSVPLRVVNPDGTVL 1758



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 69/218 (31%), Gaps = 27/218 (12%)

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD- 288
            TY+ +  ++   +       P R+ N    +L     S+G    I    D    +  ++ 
Sbjct: 1727 TYNQDGTVKKERLLNHDGSVPLRVVNPDGTVLNKVIKSDGSILEIFYNHDGTKPMNVINP 1786

Query: 289  ----------LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                            ER+ N        + SPD          +G      + +NG+  
Sbjct: 1787 DETITEKIVKWDGTILERVLNHDGTVPVRTLSPDEIYTAKIIKPDGTFFTKTVNANGTSP 1846

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSNLQAPT 396
            +R   + + S  + V    G L+             V  KDG    +R++  D      +
Sbjct: 1847 ERFI-NADGSVTERVIRANGTLLE-----------SVYDKDGKLLSQRIINHDGTNPTKS 1894

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +  G   +  R+ DG     L  ++ +G        P
Sbjct: 1895 INEDGTITMLIRRPDGTILEIL--LNHDGTAPKRTQNP 1930


>gi|115373218|ref|ZP_01460519.1| WD-repeat protein, putative [Stigmatella aurantiaca DW4/3-1]
 gi|115369819|gb|EAU68753.1| WD-repeat protein, putative [Stigmatella aurantiaca DW4/3-1]
          Length = 575

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 56/367 (15%), Positives = 125/367 (34%), Gaps = 44/367 (11%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSL----------GAQVLVTGRVIKEG----KD 122
               +++      +            WNS           G + +V+  V  +G      
Sbjct: 128 GRLRVVAVSEDGTRTVAAGEDGFVYVWNSRTGRLLKTLRGGERSIVSVAVSADGRWVLAG 187

Query: 123 RLRVEFRLWDVKDRKQI------------IGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
               + RLWD++  KQ+            +      + A        + D    S+  E 
Sbjct: 188 SEDAQARLWDLRTGKQVWSMEEEAIPIGAVALSGDGTRAVTSGKELQLWDLQQGSVLAES 247

Query: 171 GDFNSRILFVSESVVSGIIKNS-LCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
               S ++  +++          + +MD R G    +    +   +     SP+ ++   
Sbjct: 248 SSGPSPVVLSADNAFIAAGGYDAMWLMDTRSGHRFEFSLNGQMDAIAALVVSPDGKR--- 304

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--S 286
                     V L D     A +         +A  FS +G++ L S  +D  + ++   
Sbjct: 305 -AASSSQSASVRLWDMAGGTAQELASGREQPPMAVAFSQDGRKLL-SASRDGLVRLWDPR 362

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                    +L     + ++   SP     V  S  +G  +L+ ++    + +R  ++  
Sbjct: 363 EPSTGRTLVKLPPEPTVLVT---SPAGPYAV-LSGSDGALRLWNLEEE-KEVRRYGEEGG 417

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +Y+  V+S  G  +   +   E+  + V + +  Q+   +E S  +  +++ SG  +  
Sbjct: 418 PAYYPVVFSADGKRLFAAR---EEHGVDVWEVETGQQVKRLEPSGYEVTSFAASGEVVA- 473

Query: 407 SRKKDGD 413
           +  +DG 
Sbjct: 474 AGTRDGH 480



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 56/345 (16%), Positives = 110/345 (31%), Gaps = 60/345 (17%)

Query: 109 QVLVTGRVIKEGKDRLRV----EFRLWDVKDRKQIIGKKFFSSPASWR------------ 152
           + +  G V   G     V    E +LWD++    +       SP                
Sbjct: 210 EAIPIGAVALSGDGTRAVTSGKELQLWDLQQGSVLAESSSGPSPVVLSADNAFIAAGGYD 269

Query: 153 -------KIAHTI-------SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
                  +  H          D I   +    G          +   S     S+ + D 
Sbjct: 270 AMWLMDTRSGHRFEFSLNGQMDAIAALVVSPDG----------KRAASSSQSASVRLWDM 319

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            G   + L   R+Q      FS + +K+  A+ D      V L D R     + +     
Sbjct: 320 AGGTAQELASGREQPPMAVAFSQDGRKLLSASRDG----LVRLWDPREPSTGRTLVKLPP 375

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIV 317
                  S  G  A++S   D A+ +++++ +     R             +S D  ++ 
Sbjct: 376 EPTVLVTSPAGPYAVLSGS-DGALRLWNLE-EEKEVRRYGEEGGPAYYPVVFSADGKRL- 432

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F +  E    ++ +++ G   KR+       Y    ++  G+++A     G    I + K
Sbjct: 433 FAAREEHGVDVWEVET-GQQVKRLEPSG---YEVTSFAASGEVVAAGTRDG---HIQLWK 485

Query: 378 KDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               +   RL   +  ++  + S  G+ ++       D   +L+ 
Sbjct: 486 AQTLEPLFRLSGHEYGIRTVSLSGDGKWVL---SVGEDWTVRLWD 527



 Score = 46.2 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 55/341 (16%), Positives = 112/341 (32%), Gaps = 66/341 (19%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            +++D +D K++ G +     +  R IA +                 S +  +++     
Sbjct: 66  IQVFDTRDGKELHGLEGTQ-DSDLRAIALS--------------GEGSLLAAIADKGPP- 109

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                  + D                L     S +  +    T    +   VY+ ++R  
Sbjct: 110 ------WLWDLSRKPRVRKLRGAKGRLRVVAVSEDGTR----TVAAGEDGFVYVWNSRTG 159

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRAL------------------ISVQKDEAMDIYSVDL 289
           R  K +      I++   S++G+  L                  +   ++EA+ I +V L
Sbjct: 160 RLLKTLRGGERSIVSVAVSADGRWVLAGSEDAQARLWDLRTGKQVWSMEEEAIPIGAVAL 219

Query: 290 QSNATERLTNTLFIN--------ISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGS 336
             + T  +T+   +         + A  S   S +V  +D       G + +++M +   
Sbjct: 220 SGDGTRAVTSGKELQLWDLQQGSVLAESSSGPSPVVLSADNAFIAAGGYDAMWLMDTRSG 279

Query: 337 DQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--Q 393
            +   S + +       V SP G        S +  ++ +    G   + L         
Sbjct: 280 HRFEFSLNGQMDAIAALVVSPDGKR---AASSSQSASVRLWDMAGGTAQELASGREQPPM 336

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           A  +S  GR L+ S  +DG    +L+         TL+  P
Sbjct: 337 AVAFSQDGRKLL-SASRDG--LVRLWDPREPSTGRTLVKLP 374


>gi|153868736|ref|ZP_01998484.1| WD-40 repeat protein [Beggiatoa sp. PS]
 gi|152074673|gb|EDN71506.1| WD-40 repeat protein [Beggiatoa sp. PS]
          Length = 1098

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 79/214 (36%), Gaps = 24/214 (11%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATY----DDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           +    +  L     SP+ + VA A +     D++ + +YL +    +  KR+     +I 
Sbjct: 83  IGTGNEGRLDSGAISPDGEWVAGAGWTGAEWDDNTVSIYLFNRASGKLMKRLSGLEEVIS 142

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFES 320
               S +G+    S+ +            +   +++ ++T + + S     DS   +  S
Sbjct: 143 HLCVSKDGQYLGASLAEYGVRV-----WDTQTWQQIFSDTDYADRSEWCDFDSQNRLVTS 197

Query: 321 DREGKEQLYVMQSNGSD--QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI----- 373
             +G  +LY   S+      KR +       F  V+SP GD IA          +     
Sbjct: 198 SFDGYLRLYSAASDSFSLVAKRKTPGGSQP-FAAVFSPIGDKIAVGFHDSTNINVLDGHD 256

Query: 374 --GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              +   D +      ++ NL +  WS  G SL 
Sbjct: 257 LAFLYAPDTTGI----DNGNLFSVAWSQDGNSLY 286



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 54/159 (33%), Gaps = 21/159 (13%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           R+WD +  +QI     ++  + W        D            F+S+   V+ S   G 
Sbjct: 163 RVWDTQTWQQIFSDTDYADRSEW-------CD------------FDSQNRLVTSS-FDGY 202

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           ++      D      +  TP   Q  F   FSP   K+A   +D  +I  +   D     
Sbjct: 203 LRLYSAASDSFSLVAKRKTPGGSQP-FAAVFSPIGDKIAVGFHDSTNINVLDGHDLAFLY 261

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           AP   G     + +  +S +G         D+  +   +
Sbjct: 262 APDTTGIDNGNLFSVAWSQDGNSLYAGGLYDDGSNWPVL 300


>gi|119490221|ref|ZP_01622734.1| Peptidase C14, caspase catalytic subunit p20 [Lyngbya sp. PCC 8106]
 gi|119454107|gb|EAW35260.1| Peptidase C14, caspase catalytic subunit p20 [Lyngbya sp. PCC 8106]
          Length = 1245

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 72/232 (31%), Gaps = 14/232 (6%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
            + +           L + +  G   +  LT  +D   F        + +      D  +
Sbjct: 557 WYQTVQAQKQTKNAQLNLANSLGQTSKAQLTEGKDLEAFLEAIRA-GKILQKYRAKDPQV 615

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           L   + +    R   R+   RS   +   SS+GK  + S   D  + ++  + ++ A  R
Sbjct: 616 LGALIGNVYEGRERNRLLGHRSPAYSLSISSDGKTIV-SGSWDYTIKVW--NRETGAEIR 672

Query: 297 -LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L        S S S DS  IV  S   G   + V      +  R              S
Sbjct: 673 TLKGHDNYVWSVSISNDSKTIVSGS---GDNTIKVWNLETGELIRTLTGHRYGVRSVSIS 729

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLI 405
                I           I V   +  +    ++  + +  + + S   ++++
Sbjct: 730 NDSKTIVSGSDDKT---IKVWNLETGELIRTLKGHDREVSSVSISNDSKTIV 778


>gi|45544464|emb|CAF34034.1| putative WD-repeat-containing protein [Micromonospora echinospora]
          Length = 298

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 84/248 (33%), Gaps = 17/248 (6%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +          ++   F P  + +A A+ D     R++ + T  ++  + +    + 
Sbjct: 38  GEQVGRTLTGHTDTVWLVVFDPEGRLLASASED--RTARIWDVSTG-EQVGEPLTGHTAG 94

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +    F  +G     +   D  + ++ V       E LT +       ++ PD   +   
Sbjct: 95  VYGVAFHPDGGLLA-TGSADHTVRLWKVPGGEPVGEPLTESTDEIDGVAFHPDGHLVAST 153

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            D          +  G+     ++          +SP G L+A +        I      
Sbjct: 154 GDAVRLYDTATGRPVGTPLVGHTKG----AVSVAFSPDGRLLA-SGSDDLTVRIWDHAAG 208

Query: 380 GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           G+    LV     +    + P+GR L+ + +   D   +++ +   GR    + T   A 
Sbjct: 209 GAAVEPLVGHTDAVDGVVFHPNGRLLVSAAE---DCTVRVWDV-ATGRQVGEVETGHTA- 263

Query: 439 DPQW-VGF 445
            P W + F
Sbjct: 264 -PVWNIAF 270



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 51/156 (32%), Gaps = 9/156 (5%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYS 310
           +   +  ++   F  +    + +  +D  + ++  D  +       LT          + 
Sbjct: 2   LTGHQEGVIGAVFHPD-DHLVATSGEDGTVRLW--DATTGEQVGRTLTGHTDTVWLVVFD 58

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P+   +   S+ +   +++ + + G           A  +   + P G L+A T  +   
Sbjct: 59  PEGRLLASASE-DRTARIWDVST-GEQVGEPLTGHTAGVYGVAFHPDGGLLA-TGSADHT 115

Query: 371 FAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
             +  +         L E ++ +    + P G  + 
Sbjct: 116 VRLWKVPGGEPVGEPLTESTDEIDGVAFHPDGHLVA 151


>gi|302801979|ref|XP_002982745.1| hypothetical protein SELMODRAFT_268628 [Selaginella moellendorffii]
 gi|300149335|gb|EFJ15990.1| hypothetical protein SELMODRAFT_268628 [Selaginella moellendorffii]
          Length = 588

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 82/205 (40%), Gaps = 18/205 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +  + D  ++  +FS + + +A A+ D   I+   + D  + R     G+ +S+     
Sbjct: 254 QVLEAHDNEVWYLQFSRDGRHLASASKDCTAIIWEVVDDDFVRRKHTLAGHHKSVSF-VA 312

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDR 322
           +S +    L     +EA+ ++  D  +   +  T     +   S ++ PD    V     
Sbjct: 313 WSPDDSMILTCGT-EEAVKLW--DTATGECKH-TFQKASHGFTSCAWFPDGKTFV----- 363

Query: 323 EGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            G     +Y    +G++ + + + +     D   +P G  +       +   I V   + 
Sbjct: 364 TGAADKCMYRWDLSGAELE-VWKPRMPRIIDLAVTPDGSNVVCICHDKD---IRVFNLED 419

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI 405
             ER++ ED ++ + + S  GR L+
Sbjct: 420 KTERVIEEDHSITSLSVSLDGRYLL 444



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 82/286 (28%), Gaps = 59/286 (20%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V+D D    ++      + +    +SP+   +            V L DT          
Sbjct: 289 VVDDDFVRRKHTLAGHHKSVSFVAWSPDDSMILTC----GTEEAVKLWDTATGECKHTFQ 344

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                  +  +  +GK   ++   D+ M  +  DL     E     +   I  + +PD S
Sbjct: 345 KASHGFTSCAWFPDGKT-FVTGAADKCMYRW--DLSGAELEVWKPRMPRIIDLAVTPDGS 401

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI------------- 361
            +V        + + V       ++ I  +++ S      S  G  +             
Sbjct: 402 NVVCI---CHDKDIRVFNLEDKTERVI--EEDHSITSLSVSLDGRYLLVNLVSQEIHLWD 456

Query: 362 ------------------------------AFTKFSGEKFAIGVMKKDGSQ--ERLLVED 389
                                         AF     E   + +  +   +  E L    
Sbjct: 457 MALNSRSPCKYKGHRQGRYVIRSCFGGSDHAFIVSGSEDSQVYIWHRGNGELLEVLPGHS 516

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
             +   +W+PS    +F+   D D   +++ +    R+    ++ A
Sbjct: 517 GTVNCVSWNPSNPH-MFASASD-DHTIRIWGLSATKRDRHRRSSAA 560


>gi|94985895|ref|YP_605259.1| hypothetical protein Dgeo_1795 [Deinococcus geothermalis DSM 11300]
 gi|94556176|gb|ABF46090.1| WD40 repeat containing protein [Deinococcus geothermalis DSM 11300]
          Length = 320

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 83/209 (39%), Gaps = 22/209 (10%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            ++  + ++AY         D  + RVY+ D     +P+++       +   +  + +  
Sbjct: 114 SWNRAETRLAYTRSATTGNYDRRMTRVYVADVL--GSPRQVATVYGGDI-VGW-VDDRTL 169

Query: 273 LISVQKD---EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREGKEQ 327
           L++ +++      D++++D +S A   L + L      S SPD +++V+    D   +  
Sbjct: 170 LLTGKRNAANRDRDLFTLDTRSGARRTLASALAF-RGVSLSPDGARVVYTVAFDSPARNG 228

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           L++  + G   +R+       + D     +  L+   +  G    +          R L 
Sbjct: 229 LWLQPTAGGTPRRLDTFGAYRWRD----AEHLLLIPLQPDGSSHLLREYDLRTHTWRTLG 284

Query: 388 EDSNL---QAPTWSPSGRSLIFSRKKDGD 413
           +  +       + SP GR L +   +DG+
Sbjct: 285 DLGDQVRQGDWSVSPDGRHLAYLSARDGN 313



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 9/168 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G  + R L ++    +      L  +D      R L  +          SP+  +V 
Sbjct: 159 DIVGWVDDRTLLLTGKRNAANRDRDLFTLDTRSGARRTL--ASALAFRGVSLSPDGARVV 216

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS- 286
           Y    D        +       P+R+  F +     R+       LI +Q D +  +   
Sbjct: 217 YTVAFDSPARNGLWLQPTAGGTPRRLDTFGAY----RWRDAEHLLLIPLQPDGSSHLLRE 272

Query: 287 VDLQSNATERLTNTLFINISASYS--PDSSQIVFESDREGKEQLYVMQ 332
            DL+++    L +         +S  PD   + + S R+G  ++  + 
Sbjct: 273 YDLRTHTWRTLGDLGDQVRQGDWSVSPDGRHLAYLSARDGNVRVVALP 320



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 68/224 (30%), Gaps = 24/224 (10%)

Query: 219 FSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           ++P+ + + +           +Y +        +R  +         +S    R L +V+
Sbjct: 36  WTPDSRALLFLDGPPARGSTGIYQVSAEGGPVTRRFSSV------AFYSP---RLLWAVR 86

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKE-----QLYVM 331
               ++     L       L          S++   +++ +  S   G       ++YV 
Sbjct: 87  PGTGVNTTLERLVDGRKFTLPTYGADV---SWNRAETRLAYTRSATTGNYDRRMTRVYVA 143

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVED 389
              GS ++  +           W     L+   K +       +  +       R L   
Sbjct: 144 DVLGSPRQVATVYGGDIVG---WVDDRTLLLTGKRNAANRDRDLFTLDTRSGARRTLASA 200

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              +  + SP G  ++++   D    + L+     G     ++T
Sbjct: 201 LAFRGVSLSPDGARVVYTVAFDSPARNGLWLQPTAGGTPRRLDT 244



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/210 (12%), Positives = 55/210 (26%), Gaps = 24/210 (11%)

Query: 175 SRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +R+ +   +      +    + V D  G+  +  T     I+       + + +      
Sbjct: 120 TRLAYTRSATTGNYDRRMTRVYVADVLGSPRQVATVYGGDIVGWV----DDRTLLLTGKR 175

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD--IYSVDLQ 290
           +       L         +R             S +G R + +V  D      ++     
Sbjct: 176 NAANRDRDLFTLDTRSGARRTLASALAFRGVSLSPDGARVVYTVAFDSPARNGLWLQPTA 235

Query: 291 SNATERLTNTLFI---NISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                RL         +          PD S  +   + + +   +    +  DQ R   
Sbjct: 236 GGTPRRLDTFGAYRWRDAEHLLLIPLQPDGSSHL-LREYDLRTHTWRTLGDLGDQVR--- 291

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                  D   SP G  +A+         +
Sbjct: 292 -----QGDWSVSPDGRHLAYLSARDGNVRV 316


>gi|323449228|gb|EGB05118.1| hypothetical protein AURANDRAFT_31404 [Aureococcus anophagefferens]
          Length = 540

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 62/207 (29%), Gaps = 11/207 (5%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            S T  +G  +  +      VVSG    ++ V D                +      P+ 
Sbjct: 339 HSGTVWRGVKSVAVFPDGRRVVSGSYDETVKVWDAATGECVATLAGHSNTVKSVAVFPDG 398

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++V     D+     V + D         +    + + +     +G+R + S   D  + 
Sbjct: 399 RRVVSGADDE----TVKVWDAATGECVATLAGHSNTVTSVAVFPDGRRVV-SASSDNTVK 453

Query: 284 IYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++  D  +      L        S +  PD  ++V  SD    +++ V  +   +     
Sbjct: 454 VW--DAATGECVATLCGHEKTVTSVAVFPDGRRVVSGSD---DKKVKVWDAATGECVATL 508

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGE 369
                +       P G  +    F   
Sbjct: 509 SGTSYAVDGVAVFPDGRRVVSGSFDNT 535



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 71/246 (28%), Gaps = 21/246 (8%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             KG ++  +      VVSG   N++ V D                +F     P+ ++V 
Sbjct: 40  HSKGVWSVAVFPDGRRVVSGSEDNTVKVWDAATGECVATLAGHSNDVFAVAVFPDGRRVV 99

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-- 285
               D+     V + DT        +    + + +     +G+R ++S   D  + ++  
Sbjct: 100 SGADDN----TVKVWDTATGECVATLAGHSNRVTSVAVFPDGRR-VVSGSNDVTVKVWDA 154

Query: 286 -----SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
                   L  ++  R    L      +  PD   +V      G   + V  +       
Sbjct: 155 ATGECVATLAGHSPRR--FGLGAVHCVAVFPDGRHVV---SGAGDAMVKVWDAATGKCVA 209

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSP 399
                            G  +      G    + V      +    +  S+   +    P
Sbjct: 210 TLAGHSERVNSVAVFFNGRRVVSGSDDGT---VKVWDAATGECVATLGQSDCVSSVAVFP 266

Query: 400 SGRSLI 405
            GR ++
Sbjct: 267 DGRRVV 272



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 75/242 (30%), Gaps = 21/242 (8%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           + F    VVSG    ++ V D             D +     F P+ ++V   + D    
Sbjct: 223 VFFNGRRVVSGSDDGTVKVWDAATGECVATLGQSDCVSSVAVF-PDGRRVVSGSSDK--- 278

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TE 295
             V + D         +      + +     +G+R ++S  KDE + ++  D+ +     
Sbjct: 279 -TVKVWDAATGECVATLAGHSGEVKSVAVFPDGRR-VVSGSKDETVKVW--DVATGECVA 334

Query: 296 RLTNTLFINI----SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            L            S +  PD  ++V  S     E + V  +   +          +   
Sbjct: 335 TLAGHSGTVWRGVKSVAVFPDGRRVVSGSY---DETVKVWDAATGECVATLAGHSNTVKS 391

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               P G  +       +   + V      +    L    + + +    P GR ++ +  
Sbjct: 392 VAVFPDGRRVV---SGADDETVKVWDAATGECVATLAGHSNTVTSVAVFPDGRRVVSASS 448

Query: 410 KD 411
            +
Sbjct: 449 DN 450



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 66/214 (30%), Gaps = 25/214 (11%)

Query: 219 FS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +S    P+ ++V   +  D D   V + D         +      + +     +G+R ++
Sbjct: 1   WSVAVFPDGRRV--VSGSDSDDGTVKVWDAATGECVATLAGHSKGVWSVAVFPDGRR-VV 57

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQS 333
           S  +D  + ++  D  +            ++ A +  PD  ++V  +D      + V  +
Sbjct: 58  SGSEDNTVKVW--DAATGECVATLAGHSNDVFAVAVFPDGRRVVSGAD---DNTVKVWDT 112

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLL 386
              +                  P G  +  +  +     +        V    G   R  
Sbjct: 113 ATGECVATLAGHSNRVTSVAVFPDGRRVV-SGSNDVTVKVWDAATGECVATLAGHSPRRF 171

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              +      + P GR ++      GD   K++ 
Sbjct: 172 GLGAVHCVAVF-PDGRHVV---SGAGDAMVKVWD 201



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 68/230 (29%), Gaps = 22/230 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S     ++ V D              + ++     P+ ++V   + D+     V + D 
Sbjct: 15  GSDSDDGTVKVWDAATGECVATLAGHSKGVWSVAVFPDGRRVVSGSEDN----TVKVWDA 70

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFI 303
                   +    + + A     +G+R ++S   D  + ++  D  +      L      
Sbjct: 71  ATGECVATLAGHSNDVFAVAVFPDGRR-VVSGADDNTVKVW--DTATGECVATLAGHSNR 127

Query: 304 NISASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
             S +  PD  ++V  S+       +      V    G   +R       +       P 
Sbjct: 128 VTSVAVFPDGRRVVSGSNDVTVKVWDAATGECVATLAGHSPRRF---GLGAVHCVAVFPD 184

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGRSLI 405
           G  +           + V      +    +   + +  + +   +GR ++
Sbjct: 185 GRHVV---SGAGDAMVKVWDAATGKCVATLAGHSERVNSVAVFFNGRRVV 231


>gi|300868908|ref|ZP_07113514.1| WD-repeat protein [Oscillatoria sp. PCC 6506]
 gi|300333125|emb|CBN58706.1| WD-repeat protein [Oscillatoria sp. PCC 6506]
          Length = 552

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/356 (13%), Positives = 114/356 (32%), Gaps = 25/356 (7%)

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
             ++   + I + +D     +  +V   +  +   + R    L  V       GK    +
Sbjct: 192 GGRVVAINGIIQLED----KSDKIVAAGIEIDTFLKWRTSLALPTVPQDSPTPGKPQTGT 247

Query: 148 P-ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           P  +  ++    +  +  ++    G   S +       VSG    S+ V +     ++  
Sbjct: 248 PVNNSPRLPANAAFTLASALKVSAGV-VSSVAAAGSHFVSGNTDGSISVWNLPSGELKST 306

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +     + + +  A  + D      + + +       + +     +++A   S
Sbjct: 307 LRGHGDAVNAVAIASDGKIFASGSDDK----TIKIWNLETGENIRTLTGHSDVVVAIALS 362

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGK 325
            +G+    S   D+ + I+  ++++ A    L     +  S + + D   +   S ++G 
Sbjct: 363 PDGQFLA-SGSWDKTVKIW--NVKTGALLYTLLGHSALVNSVAIAADGKTLASGS-KDGS 418

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-- 383
             + +      D  R  +    S     +SP    +A     G    I +      Q   
Sbjct: 419 --IKLWNLQTGDLIRTLKGNSLSILSVAFSPDVKTLASGSGDGT---ISLWNLGTGQLIK 473

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           RL      + +   +  G +L+       D   KL+ +       TL     Y + 
Sbjct: 474 RLSGHTDGVWSVAITKDGNTLV---SGSWDKTVKLWDVRSGALKGTLSGHSGYVNS 526


>gi|148906871|gb|ABR16581.1| unknown [Picea sitchensis]
          Length = 584

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 80/206 (38%), Gaps = 19/206 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--KRIGNFRSMILA 262
            +  S    ++  +FS N + +A A+   +D   +    T +D      R+   +  +  
Sbjct: 267 QILESHKNEVWFLQFSNNGKYLASAS---KDCTAIIWEITEVDAFSVKHRLTAHQKPVSF 323

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFES 320
             +S +  + L++   +E + ++  ++++   + LT     +   S  + PD  +  F S
Sbjct: 324 VAWSPD-DKLLLTCGIEEVVKLW--NVETGECK-LTYDKANSGFTSCGWFPDGKR--FIS 377

Query: 321 DREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
              G ++ +Y+    G +             D   +  G  I        + AI +   +
Sbjct: 378 --GGVDKCIYIWDLEGKELDSWKGQGMPKISDLAVTSDGKEIISIC---GETAIVMYNLE 432

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
              ERL+ E+S + +   S   R L+
Sbjct: 433 TKTERLIEEESGITSLCVSKDSRFLL 458


>gi|282879247|ref|ZP_06287997.1| OmpA family protein [Prevotella buccalis ATCC 35310]
 gi|281298640|gb|EFA91059.1| OmpA family protein [Prevotella buccalis ATCC 35310]
          Length = 703

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 61/170 (35%), Gaps = 27/170 (15%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQL 328
             +SV+ D+        +Q        NT     + ++SPD  ++      +D       
Sbjct: 203 IFVSVKDDKGNWGKPEPVQGGL-----NTDAEEGACAFSPDGREMYLTQCVTDATNPRYA 257

Query: 329 YVMQSNGSDQK-------RISQDKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKK 378
            +++S+ +D          I++D  +SY  P  SP G  + F            I  ++ 
Sbjct: 258 KIVKSSRADAAWGKANNLEITRDTLSSYAHPAISPDGQWLYFVSDMPGGMGGMDIWRVRI 317

Query: 379 D----GSQERL---LVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYS 420
                G  E L   +    N   PT+ P+G  L FS     G  G  +Y 
Sbjct: 318 TPAGLGGVENLGAPINTPGNEMFPTFRPNGD-LYFSSDGHPGLGGLDIYI 366



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 25/145 (17%)

Query: 264 RFSSNGKRALISVQKDEAMDIY--------SVDLQSNATERL---TNTLFINISASYSPD 312
            FS +G+   ++    +A +            D        L    +TL      + SPD
Sbjct: 234 AFSPDGREMYLTQCVTDATNPRYAKIVKSSRADAAWGKANNLEITRDTLSSYAHPAISPD 293

Query: 313 SSQIVFESDREGKEQ---LYVMQSNGSDQKRISQ-----DKEASYFDPVWSPQGDLIAFT 364
              + F SD  G      ++ ++   +    +       +   +   P + P GDL  + 
Sbjct: 294 GQWLYFVSDMPGGMGGMDIWRVRITPAGLGGVENLGAPINTPGNEMFPTFRPNGDL--YF 351

Query: 365 KFSG----EKFAIGVMKKDGSQERL 385
              G        I +   + S E++
Sbjct: 352 SSDGHPGLGGLDIYIALPNASAEQV 376



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 10/96 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID----RAPKRIG-- 254
           AN   +T         P  SP+ Q + + +     +  + +   RI        + +G  
Sbjct: 272 ANNLEITRDTLSSYAHPAISPDGQWLYFVSDMPGGMGGMDIWRVRITPAGLGGVENLGAP 331

Query: 255 -NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            N     + P F  NG     S   D    +  +D+
Sbjct: 332 INTPGNEMFPTFRPNGD-LYFSS--DGHPGLGGLDI 364


>gi|295688689|ref|YP_003592382.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Caulobacter segnis ATCC 21756]
 gi|295430592|gb|ADG09764.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Caulobacter segnis ATCC 21756]
          Length = 679

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 3/97 (3%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM-KKDGSQERLLVE--DSNLQAP 395
           +R       S    + SP G  + +         I V  + D SQ + L       +++ 
Sbjct: 39  ERAKLFGNPSRGRGLISPDGKWLVWGAPRDGVMNIWVAPRSDPSQAKPLTSEKTRPIRSF 98

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            WSP   S++F   K GD    LY +D+    +  + 
Sbjct: 99  FWSPDSSSILFINDKGGDENFLLYGVDVATGVQRALT 135



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD   +V+ + R+G   ++V   S+ S  K ++ +K        WSP    I F    G
Sbjct: 55  SPDGKWLVWGAPRDGVMNIWVAPRSDPSQAKPLTSEKTRPIRSFFWSPDSSSILFINDKG 114

Query: 369 E--KFAIGVMKKDGSQERLLV 387
               F +  +      +R L 
Sbjct: 115 GDENFLLYGVDVATGVQRALT 135



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 7/131 (5%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINI-SASYSPDSSQIVFESDRE 323
           S +GK  +    +D  M+I+       +  + LT+     I S  +SPDSS I+F +D+ 
Sbjct: 55  SPDGKWLVWGAPRDGVMNIWVAPRSDPSQAKPLTSEKTRPIRSFFWSPDSSSILFINDKG 114

Query: 324 GKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSP---QGDLIAFTKFSGEKFAIGVMKK 378
           G E   LY +      Q+ ++  ++        S       L+           +  +  
Sbjct: 115 GDENFLLYGVDVATGVQRALTPFEKTRAQILGISREVKDRILVGLNNRDPRWHDVYSLDL 174

Query: 379 DGSQERLLVED 389
                +L+ ++
Sbjct: 175 KSGDLKLVFKN 185



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 33/83 (39%), Gaps = 4/83 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQ 277
            SP+ + + +     + ++ +++         K + + ++  I +  +S +    L    
Sbjct: 54  ISPDGKWLVWGA-PRDGVMNIWVAPRSDPSQAKPLTSEKTRPIRSFFWSPDSSSILFIND 112

Query: 278 KDEAMD--IYSVDLQSNATERLT 298
           K    +  +Y VD+ +     LT
Sbjct: 113 KGGDENFLLYGVDVATGVQRALT 135


>gi|110349999|ref|NP_001036026.1| WD repeat and SOCS box-containing 1 isoform 1 [Rattus norvegicus]
 gi|149053571|gb|EDM05388.1| WD repeat and SOCS box-containing 1, isoform CRA_b [Rattus
           norvegicus]
 gi|189442747|gb|AAI67746.1| WD repeat and SOCS box-containing 1 [Rattus norvegicus]
          Length = 421

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 62/185 (33%), Gaps = 25/185 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHIEVVRDLTFAPDGSLLLVSASRDKTLRVWDLKDDGNMVKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPD S +         + +++   +     R  +          +SP 
Sbjct: 211 RGHQNWVYSCAFSPDCSMLC---SVGASKAVFLWNMDKYTMIRRLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + V          L+E  +L  P                 ++S  
Sbjct: 268 GALLATASYDT---RVYVWDPHIGDT--LMEFGHLFPPPTPIFAGGANDRWVRAVSFSHD 322

Query: 401 GRSLI 405
           G  + 
Sbjct: 323 GLHVA 327



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/257 (12%), Positives = 79/257 (30%), Gaps = 43/257 (16%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++             + H    ++ + +T      +  +L VS S   
Sbjct: 151 RIKIWDVYTGKLLLNL-----------VDHI---EVVRDLTFAP---DGSLLLVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L +   
Sbjct: 194 TL---RVWDLKDDG-NMVKVLRGHQNWVYSCAFSPDCSMLCSV----GASKAVFLWNMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN---------ATERL 297
               +R+      ++A  FS +G     +   D  + ++   +                +
Sbjct: 246 YTMIRRLEGHHHDVVACDFSPDGALLA-TASYDTRVYVWDPHIGDTLMEFGHLFPPPTPI 304

Query: 298 TNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                 +    + S+S D   +   +D    + +           +++           +
Sbjct: 305 FAGGANDRWVRAVSFSHDGLHVASLAD---DKMVRFWSIGDDCPVQVAPLSNG--LCCAF 359

Query: 355 SPQGDLIAFTKFSGEKF 371
           S  G ++A     G  +
Sbjct: 360 STDGSVLAAGTHDGSVY 376



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 58/139 (41%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L + + +    +++PD S ++  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHIEVVRDLTFAPDGSLLLVSASRDKTLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K + +  +   +   +SP   ++     S   F +  M K     RL     
Sbjct: 200 LKDDGNMVKVL-RGHQNWVYSCAFSPDCSMLCSVGASKAVF-LWNMDKYTMIRRLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 258 DVVACDFSPDGALLATASY 276


>gi|70608010|ref|YP_256880.1| tricorn protease [Sulfolobus acidocaldarius DSM 639]
 gi|68568658|gb|AAY81587.1| tricorn protease [Sulfolobus acidocaldarius DSM 639]
          Length = 1007

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 45/109 (41%), Gaps = 4/109 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG- 368
           SPD  +++  ++R    +L++       +K I +       +  W P G+  ++    G 
Sbjct: 365 SPDGKKLLISNNRL---ELWLYDLESKKEKLIDKSSYGIIREFDWHPTGEWFSYAFPEGF 421

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              +I +    G+  R+    +   +P++ P G+ L F   +  D  S 
Sbjct: 422 RTQSIKIANVSGNIIRVTSPYAFDFSPSFDPDGKFLYFLSARTLDPSSD 470



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 61/196 (31%), Gaps = 34/196 (17%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--DREG 324
            + +   ++   D+  D++ + L+     R+T    ++I    SPD  +I F +   R G
Sbjct: 3   PDIRNDFVAFTTDD--DVWLMSLKDMRPIRVTTDTGVSIKPKISPDGKRIAFTTLWLRSG 60

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------------------- 364
           K+   V        KR++     + +   W    +++  T                    
Sbjct: 61  KQGADVFIVEDGRSKRVTYFNRPTTWVAGWLSDKEIMVITDYHTPFNAWTEAYKVNVNDE 120

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +    + I V       E +++       P W            + G  G    S D  
Sbjct: 121 SYEPLPYGI-VSNISIKNETIVIARGYQDLPFW---------KGYRGGTKGELWISFDAG 170

Query: 425 GRNETLINTPAYASDP 440
              +  ++     S P
Sbjct: 171 ETFKKFLSLNGIISHP 186



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 60/161 (37%), Gaps = 7/161 (4%)

Query: 165 SITGEKGDFNSRILFVSESVVS--GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            +  ++G     + F+S   ++     +N L ++ +DG   + +     +I      SP+
Sbjct: 309 QLGEKQGVKYRELQFLSNEDIAVVDSNENKLLILSKDGKIKQKVEKDFGRIEKIKA-SPD 367

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +K+  +     + L ++L D    +      +   +I    +   G+    +  +    
Sbjct: 368 GKKLLIS----NNRLELWLYDLESKKEKLIDKSSYGIIREFDWHPTGEWFSYAFPEGFRT 423

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
               +   S    R+T+    + S S+ PD   + F S R 
Sbjct: 424 QSIKIANVSGNIIRVTSPYAFDFSPSFDPDGKFLYFLSART 464



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 80/222 (36%), Gaps = 37/222 (16%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV----QKDEA 281
           VA+ T DD     V+LM  + D  P R+     + + P+ S +GKR   +        + 
Sbjct: 10  VAFTTDDD-----VWLMSLK-DMRPIRVTTDTGVSIKPKISPDGKRIAFTTLWLRSGKQG 63

Query: 282 MDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIV---FESDREGKEQLYVMQSNGSD 337
            D++ V  +   ++R+T         A +  D   +V   + +      + Y +  N   
Sbjct: 64  ADVFIV--EDGRSKRVTYFNRPTTWVAGWLSDKEIMVITDYHTPFNAWTEAYKVNVNDES 121

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTK-----------FSGEKFAIGV-MKKDGSQERL 385
            + +     ++      S + + I   +             G K  + +      + ++ 
Sbjct: 122 YEPLPYGIVSN-----ISIKNETIVIARGYQDLPFWKGYRGGTKGELWISFDAGETFKKF 176

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           L  +  +  P        + F      ++ S LYS+D+ G N
Sbjct: 177 LSLNGIISHPMILND--RVYFLSDH--ESVSNLYSVDMQGEN 214



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 70/232 (30%), Gaps = 40/232 (17%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGK 270
            +  +P+ SP+ +++A+ T       +   +    D   KR+  F R       + S+ +
Sbjct: 36  GVSIKPKISPDGKRIAFTTLWLRSGKQGADVFIVEDGRSKRVTYFNRPTTWVAGWLSDKE 95

Query: 271 RALIS---VQKDEAMDIYSVDLQSNATERLTNT---------------LFINISASYSPD 312
             +I+      +   + Y V++   + E L                          +   
Sbjct: 96  IMVITDYHTPFNAWTEAYKVNVNDESYEPLPYGIVSNISIKNETIVIARGYQDLPFWK-- 153

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP--QGDLIAFTKFSGEK 370
                    R G +    +  +  +    +  K  S    +  P    D + F       
Sbjct: 154 -------GYRGGTKGELWISFDAGE----TFKKFLSLNGIISHPMILNDRVYFLSDHESV 202

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +  +   G         S+      S  G+ ++F  ++ GD    +Y  D
Sbjct: 203 SNLYSVDMQGENLLKHTNFSDYYCRNASSDGKRIVF--QRAGD----IYLFD 248


>gi|196228174|ref|ZP_03127041.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
 gi|196227577|gb|EDY22080.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
          Length = 1099

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 82/252 (32%), Gaps = 32/252 (12%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            S    LF+  +SP+  ++A A+        V ++DT            R++ +A  +S 
Sbjct: 597 HSSHSNLFDVAWSPDGTRIATAS---RGWGLVEVLDTASGCPLGVYALPRAVRVA--WSP 651

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+         +   I+     +     +T  L    S  + PD ++I      +G  Q
Sbjct: 652 SGRYLA--GAGLDETRIW----DTRNGMLVTTILRPTKSLVWFPDETRIALGGT-DGAIQ 704

Query: 328 LY------------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           ++                          +   + FD  WSP G  +A+    G    +  
Sbjct: 705 VWDAFAGTILSTWKTASPAPLGSAVSEYEPPHAIFDMRWSPGGHYLAYGTQDGLADVLD- 763

Query: 376 MKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               G   R L    S +    WSP+G  L        D   ++++ D  G    + +  
Sbjct: 764 -GATGHLIRQLHGHSSGVWRVAWSPNGHRLA---TAGQDGIVRIFATDSGGEVAQISHGL 819

Query: 435 AYASDPQ--WVG 444
             +      W  
Sbjct: 820 GTSELDALDWSP 831



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/272 (15%), Positives = 85/272 (31%), Gaps = 22/272 (8%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
           +S    R  AHT             G F          + +G     + +    G   ++
Sbjct: 237 ASQDRLRINAHT------------GGVFALCANADGTRLATGGADGEIALWQTRGLVPQW 284

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
              +    +    +S + + +A  +   +  +R++ ++     A  RIG   + +    +
Sbjct: 285 RVQAHPGGVLAVSWSSDGKYLA--SGGQDGYVRIWDINAHKSVAEVRIG-IGNPVRTVAW 341

Query: 266 SS-NGK--RALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +G      I S++K+  +     +  +   E    T     S  +S D +++    +
Sbjct: 342 RPNDGGTPTLAIGSLEKELLIWHPLGNGNAGRPETFATTKHGAASLDWSADGARLA-AGE 400

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +  + L V   N      I+       F     P G  +A            + KKD  
Sbjct: 401 TDTDKTLEVFDFNSRAAFSIAAGSGNDVFAVAIDPTGKYVAAGSKHLTVSVYEIGKKD-R 459

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                     + A  W P G  +  S   DG 
Sbjct: 460 LYNFTTHHGFISAVAWRPEGSQIA-SASHDGT 490



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 8/100 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+SP    +AY T D        ++D       +++    S +    +S NG R   + Q
Sbjct: 742 RWSPGGHYLAYGTQDG----LADVLDGATGHLIRQLHGHSSGVWRVAWSPNGHRLATAGQ 797

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQ 315
            D  + I++ D       ++++ L  +   +  +SPD  Q
Sbjct: 798 -DGIVRIFATD-SGGEVAQISHGLGTSELDALDWSPDGQQ 835



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 56/201 (27%), Gaps = 28/201 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + +A A  D+  I           R    +        +  +  +  R  +   
Sbjct: 648 AWSPSGRYLAGAGLDETRIWD--------TRNGMLVTTILRPTKSLVWFPDETRIALGGT 699

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFI------NISA-------SYSPDSSQIVFESDREG 324
            D A+ ++     +  +   T +                     +SP    + + +    
Sbjct: 700 -DGAIQVWDAFAGTILSTWKTASPAPLGSAVSEYEPPHAIFDMRWSPGGHYLAYGTQDGL 758

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +   V+        R      +  +   WSP G  +A T        I      G   +
Sbjct: 759 AD---VLDGATGHLIRQLHGHSSGVWRVAWSPNGHRLA-TAGQDGIVRIFATDSGGEVAQ 814

Query: 385 LLVEDSNLQAPT--WSPSGRS 403
           +       +     WSP G+ 
Sbjct: 815 ISHGLGTSELDALDWSPDGQQ 835



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 41/229 (17%), Positives = 72/229 (31%), Gaps = 16/229 (6%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  ++A    D E    + L  TR      R+      +LA  +SS+GK    S  +D  
Sbjct: 259 DGTRLATGGADGE----IALWQTRGLVPQWRVQAHPGGVLAVSWSSDGKYLA-SGGQDGY 313

Query: 282 MDIYSVDL-QSNATERLTNTLFINISASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + I+ ++  +S A  R+     +   A + P D            KE L        +  
Sbjct: 314 VRIWDINAHKSVAEVRIGIGNPVRTVA-WRPNDGGTPTLAIGSLEKELLIWHPLGNGNAG 372

Query: 340 RISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           R       +       WS  G  +A  +   +K  + V   +      +   S       
Sbjct: 373 RPETFATTKHGAASLDWSADGARLAAGETDTDK-TLEVFDFNSRAAFSIAAGSGNDVFAV 431

Query: 398 S--PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +  P+G+ +    K        +Y I    R         + S   W  
Sbjct: 432 AIDPTGKYVAAGSK---HLTVSVYEIGKKDRLYNFTTHHGFISAVAWRP 477



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 51/155 (32%), Gaps = 11/155 (7%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            +          ++WD      I+     +SPA                       F+ R
Sbjct: 692 TRIALGGTDGAIQVWDAFAG-TILSTWKTASPAPL--------GSAVSEYEPPHAIFDMR 742

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                  +  G       V+D    ++          ++   +SPN  ++A A  D   I
Sbjct: 743 WSPGGHYLAYGTQDGLADVLDGATGHLIRQLHGHSSGVWRVAWSPNGHRLATAGQD--GI 800

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +R++  D+  + A    G   S + A  +S +G++
Sbjct: 801 VRIFATDSGGEVAQISHGLGTSELDALDWSPDGQQ 835


>gi|167584678|ref|ZP_02377066.1| putative secreted protein [Burkholderia ubonensis Bu]
          Length = 470

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 84/267 (31%), Gaps = 23/267 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYD 232
           +  L     V  G   + L + D     +  L+ S   I       FSP+ + +A+    
Sbjct: 44  TGKLVYHSYVKYGDGTSQLFLYDFSAHTLTQLSKSSWGITDPMNGVFSPDGKWLAFMGI- 102

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             +   V+++       P  + N         P+FS++GK  +     D      S    
Sbjct: 103 KNNAWNVFMLQLGTSNPPINMTNSTGATRNEDPKFSADGKTLVFKQNGDVKQATLSYTSA 162

Query: 291 S---NATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                +   LTN            +PD+S + + +       L                 
Sbjct: 163 GPVFTSVVSLTNAPAGAEYSMPFLAPDASAVYYATGTGANMGLMKRTIATGATAVFDNPA 222

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF--AIG--VMKKDGSQERLLVED--SNLQAPTWSP 399
               + P+    G  + + ++        I         +  +L + D  SN   P  +P
Sbjct: 223 GLQTYYPIVRADG-AVFYARWKDASQLDQIYSKTSNPASTPNQLAINDCISNNSDP--AP 279

Query: 400 -SGR-SLIFSRKKDGDTGSKLYSIDLN 424
            +G   L FS    G  G +LY  D+ 
Sbjct: 280 VNGTNYLFFSSTTAG--GYQLYVGDVT 304



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 69/173 (39%), Gaps = 13/173 (7%)

Query: 280 EAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSN 334
             +   +++L   A E   ++N    + ++  S  + ++V+ S     +G  QL++   +
Sbjct: 9   GLVAGIALNLSGGAAEAACISNPPAQSNASFPSALTGKLVYHSYVKYGDGTSQLFLYDFS 68

Query: 335 GSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL----LVE 388
                ++S+         + V+SP G  +AF       + + +++   S   +       
Sbjct: 69  AHTLTQLSKSSWGITDPMNGVFSPDGKWLAFMGIKNNAWNVFMLQLGTSNPPINMTNSTG 128

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            +  + P +S  G++L+F  K++GD      S    G   T + +   A    
Sbjct: 129 ATRNEDPKFSADGKTLVF--KQNGDVKQATLSYTSAGPVFTSVVSLTNAPAGA 179


>gi|41019302|gb|AAR98560.1| GntN [Micromonospora echinospora]
 gi|85814027|emb|CAF31443.1| putative gentamicin production protein [Micromonospora echinospora]
          Length = 311

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 84/248 (33%), Gaps = 17/248 (6%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +          ++   F P  + +A A+ D     R++ + T  ++  + +    + 
Sbjct: 51  GEQVGRTLTGHTDTVWLVVFDPEGRLLASASED--RTARIWDVSTG-EQVGEPLTGHTAG 107

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +    F  +G     +   D  + ++ V       E LT +       ++ PD   +   
Sbjct: 108 VYGVAFHPDGGLLA-TGSADHTVRLWKVPGGEPVGEPLTESTDEIDGVAFHPDGHLVAST 166

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            D          +  G+     ++          +SP G L+A +        I      
Sbjct: 167 GDAVRLYDTATGRPVGTPLVGHTKG----AVSVAFSPDGRLLA-SGSDDLTVRIWDHAAG 221

Query: 380 GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           G+    LV     +    + P+GR L+ + +   D   +++ +   GR    + T   A 
Sbjct: 222 GAAVEPLVGHTDAVDGVVFHPNGRLLVSAAE---DCTVRVWDV-ATGRQVGEVETGHTA- 276

Query: 439 DPQW-VGF 445
            P W + F
Sbjct: 277 -PVWNIAF 283



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 19/162 (11%), Positives = 52/162 (32%), Gaps = 9/162 (5%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFIN 304
            R    +   +  ++   F  +    + +  +D  + ++  D  +       LT      
Sbjct: 9   TRPSLVLTGHQEGVIGAVFHPD-DHLVATSGEDGTVRLW--DATTGEQVGRTLTGHTDTV 65

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P+   +   S+ +   +++ + + G           A  +   + P G L+A T
Sbjct: 66  WLVVFDPEGRLLASASE-DRTARIWDVST-GEQVGEPLTGHTAGVYGVAFHPDGGLLA-T 122

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
             +     +  +         L E ++ +    + P G  + 
Sbjct: 123 GSADHTVRLWKVPGGEPVGEPLTESTDEIDGVAFHPDGHLVA 164


>gi|328873777|gb|EGG22143.1| transcriptional repressor TUP1 [Dictyostelium fasciculatum]
          Length = 539

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 74/247 (29%), Gaps = 32/247 (12%)

Query: 200 GANIRYLTP---------SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           G N    T          + + ++   +FS + + +A        I          +   
Sbjct: 224 GYNPNVQTNLNIDLMHNLTHNSVVCCVKFSNDGKYLATGCNRSAQIYDTDTGKKLHNFYD 283

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASY 309
                    I +  FS +GK    +  +D+ + ++  D+       +     ++  S  +
Sbjct: 284 DSEREGDLYIRSVCFSPDGKYLA-TGAEDKTVKVW--DIAHKKIHHIFTGHELDIYSLDF 340

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-----ASYFDPVWSPQGDLIAFT 364
           S D   IV  S   G ++  +           +   E             SP G L+A  
Sbjct: 341 SQDGRYIVSGS---GDKKAKIWDLKDGKC-LFTLGNEEVGPKNGVTSVAISPDGRLVAAG 396

Query: 365 KFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                   + +         ER      ++ +  +SP G+SL       G     L   D
Sbjct: 397 SLDN---IVRLWDAHSGYFLERYEGHLDSVYSVAFSPDGKSLA-----SGSLDKSLKLWD 448

Query: 423 LNGRNET 429
           L+G    
Sbjct: 449 LSGSRSR 455



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 84/241 (34%), Gaps = 34/241 (14%)

Query: 153 KIAHTISDDIYQSITGE-----KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
            IAH     I+   TG        DF+    ++     SG  K  +  +  DG  +  L 
Sbjct: 318 DIAHK---KIHHIFTGHELDIYSLDFSQDGRYIVS--GSGDKKAKIWDLK-DGKCLFTLG 371

Query: 208 P---SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +     SP+ + VA  + D+     V L D       +R       + +  
Sbjct: 372 NEEVGPKNGVTSVAISPDGRLVAAGSLDN----IVRLWDAHSGYFLERYEGHLDSVYSVA 427

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFIN--ISASYSPDSSQIVFE 319
           FS +GK    S   D+++ ++  DL  + +    + T     +  +S ++SP  + ++  
Sbjct: 428 FSPDGKSLA-SGSLDKSLKLW--DLSGSRSRSRCKATFNGHKDFVLSVAFSPCGNWLISG 484

Query: 320 S-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           S DR     +            + Q  + S      SP+G + A        F   + K 
Sbjct: 485 SKDRS----VQFWDPRSVTTHMMLQGHKNSVISVALSPKGGVFA---TGSGDFRARLWKY 537

Query: 379 D 379
           D
Sbjct: 538 D 538


>gi|116199375|ref|XP_001225499.1| hypothetical protein CHGG_07843 [Chaetomium globosum CBS 148.51]
 gi|88179122|gb|EAQ86590.1| hypothetical protein CHGG_07843 [Chaetomium globosum CBS 148.51]
          Length = 931

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 53/146 (36%), Gaps = 9/146 (6%)

Query: 219 FSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           FSP   KV    +      I     + TR D   + +     +++A  FS +GK    S 
Sbjct: 718 FSPTLSKVRKQQWKRRLSFIKSAAGVKTRWDTHQQTLEGHSDLVMAVAFSPDGKTLA-SG 776

Query: 277 QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             D+ + ++  D  +   ++ L        + ++SPD   +   SD      + +  +  
Sbjct: 777 SYDKTIRLW--DAATGTHQQTLEGHRHSVDAVAFSPDGKTLASGSD---DRTIRLWDAAT 831

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLI 361
              ++  +   +      +S  G  +
Sbjct: 832 GTHQQTLEWHGSPVRALAFSSDGKTL 857



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 8/115 (6%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +        ++    FSP+ + +A  +YD      + L D       + +   R  + A
Sbjct: 750 HQQTLEGHSDLVMAVAFSPDGKTLASGSYDK----TIRLWDAATGTHQQTLEGHRHSVDA 805

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQI 316
             FS +GK    S   D  + ++  D  +   ++ L        + ++S D   +
Sbjct: 806 VAFSPDGKTLA-SGSDDRTIRLW--DAATGTHQQTLEWHGSPVRALAFSSDGKTL 857



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 8/99 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD   +   S     + + +  +     ++  +    S     +SP G  +A     
Sbjct: 765 AFSPDGKTLASGSY---DKTIRLWDAATGTHQQTLEGHRHSVDAVAFSPDGKTLA---SG 818

Query: 368 GEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSL 404
            +   I +        +  +E   S ++A  +S  G++L
Sbjct: 819 SDDRTIRLWDAATGTHQQTLEWHGSPVRALAFSSDGKTL 857



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 4/91 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG    ++ + D      +         +    FSP+ + +A  + D      + L
Sbjct: 771 KTLASGSYDKTIRLWDAATGTHQQTLEGHRHSVDAVAFSPDGKTLASGSDDR----TIRL 826

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            D       + +    S + A  FSS+GK  
Sbjct: 827 WDAATGTHQQTLEWHGSPVRALAFSSDGKTL 857



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 30/95 (31%), Gaps = 8/95 (8%)

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAP 395
            ++  +          +SP G  +A   +      I +        +  +E       A 
Sbjct: 750 HQQTLEGHSDLVMAVAFSPDGKTLASGSYDKT---IRLWDAATGTHQQTLEGHRHSVDAV 806

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +SP G++L        D   +L+        +TL
Sbjct: 807 AFSPDGKTLASGSD---DRTIRLWDAATGTHQQTL 838


>gi|284050492|ref|ZP_06380702.1| WD-40 repeat-containing serine/threonin protein kinase [Arthrospira
           platensis str. Paraca]
          Length = 303

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 80/266 (30%), Gaps = 27/266 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    S+ + + +   +          +     SPN +++   ++D   +       T 
Sbjct: 12  SGSADQSIRLWNLNTGQLVQRFCGHVAAVNAIAISPNGRRLVSGSFDRNLLGWNLNTGTM 71

Query: 246 IDRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
            DR     G+  S    P     +S +G              I   + ++     RL   
Sbjct: 72  TDRFFSHSGSPYSHRCGPIHAVAYSPDGHIIA---SCSGNATIKLWNQRNGELLYRLREH 128

Query: 301 LFIN--ISASYSPDSSQI------------VFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                 ++ ++SP ++              +F S      Q+ + Q       +      
Sbjct: 129 SGEVFCVTFAFSPANNSRNYDSLFNHPQSSIFASG-GADGQIKIWQFGKLHSLQTLTGHS 187

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                  +SP    I  +        +    +        V+ + + +   SP G+   F
Sbjct: 188 GGVLSLAFSPN-QTILASSSEDGTIKLWDFHQGILLTTQTVDSAVISSIAISPDGK---F 243

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLIN 432
                 D   +L+ ID+ G ++  + 
Sbjct: 244 MAGGSDDGKIRLWKIDIQGISQQPLG 269



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 71/220 (32%), Gaps = 35/220 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN+    Y          + L +    +  +R     + + A   S NG+R + S  
Sbjct: 2   AISPNR----YILISGSADQSIRLWNLNTGQLVQRFCGHVAAVNAIAISPNGRRLV-SGS 56

Query: 278 KDEAMDIYSVDLQSNATE-RLTNTLFINISAS--------YSPDSSQIVFESDREGKEQL 328
            D  +  +  +L +     R  +      S          YSPD   I   S   G   +
Sbjct: 57  FDRNLLGW--NLNTGTMTDRFFSHSGSPYSHRCGPIHAVAYSPDGHIIASCS---GNATI 111

Query: 329 YVMQS-NGSDQKRIS-QDKEASYFDPVWSPQGD-------------LIAFTKFSGEKFAI 373
            +    NG    R+     E       +SP  +              I  +  +  +  I
Sbjct: 112 KLWNQRNGELLYRLREHSGEVFCVTFAFSPANNSRNYDSLFNHPQSSIFASGGADGQIKI 171

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
               K  S + L      + +  +SP+ ++++ S  +DG 
Sbjct: 172 WQFGKLHSLQTLTGHSGGVLSLAFSPN-QTILASSSEDGT 210


>gi|162450812|ref|YP_001613179.1| hypothetical protein sce2540 [Sorangium cellulosum 'So ce 56']
 gi|161161394|emb|CAN92699.1| unnamed protein product [Sorangium cellulosum 'So ce 56']
          Length = 598

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 47/144 (32%), Gaps = 5/144 (3%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-- 324
            +GK    +        ++ +D       +LT      + A  +PD +++V   DR+G  
Sbjct: 14  PDGKALYFTWTITGTRQVFRLDGPQRFPLQLTGGEDPTVVADVTPDGARLVLSRDRKGEE 73

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQ 382
              LY+    G     I             S  G  + +       + + I        Q
Sbjct: 74  NPGLYLQDVKGGPLVAIQHLPGVQTQLQFVSDDGRHVYYRANDVKKDAYVIYRYDIASRQ 133

Query: 383 ERLLVE-DSNLQAPTWSPSGRSLI 405
              + + +   +A   +  GR L+
Sbjct: 134 REPVFDREGIWRAVDATADGRLLL 157



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 38/136 (27%), Gaps = 9/136 (6%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE- 369
           PD   + F     G  Q++ +        +++   E        +P G  +  ++     
Sbjct: 14  PDGKALYFTWTITGTRQVFRLDGPQRFPLQLT-GGEDPTVVADVTPDGARLVLSRDRKGE 72

Query: 370 -KFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               + +    G     +        Q    S  GR + +           +Y  D+  R
Sbjct: 73  ENPGLYLQDVKGGPLVAIQHLPGVQTQLQFVSDDGRHVYYRANDVKKDAYVIYRYDIASR 132

Query: 427 NETLINTPAYASDPQW 442
                  P +  +  W
Sbjct: 133 QRE----PVFDREGIW 144


>gi|86604774|ref|YP_473537.1| WD domain-/G-beta repeat-containing protein [Synechococcus sp.
           JA-3-3Ab]
 gi|86553316|gb|ABC98274.1| WD domain, G-beta repeat protein [Synechococcus sp. JA-3-3Ab]
          Length = 702

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 53/366 (14%), Positives = 107/366 (29%), Gaps = 52/366 (14%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNS---LGAQV---LVTGRVIKEGKDRLRVE----- 127
           F+   Q     K  +P       DW     L A++        +       L V      
Sbjct: 349 FSFTEQPPNPSKTGSPAL--DLADWAKSLRLKAKLEGPAAITALAISPDGNLLVAGGDDG 406

Query: 128 -FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             R WD +  + +  + +     S   +A  IS D    +     D   R+  ++     
Sbjct: 407 VIRFWDPQAGQLL--QSWTGHEGSIETLA--ISPD-GTFLVSGGADKTVRVWDLAALGDP 461

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +               R        ++     SP+ + +A  + D      + L     
Sbjct: 462 ALRSGE--------GVPRLQLQGHTDLINSVAISPDGRWIASGSADR----TIRLWQAED 509

Query: 247 DRAPKRIGN------FRSMILAPRFSSNG-----KRALISVQKDEAMDIYSVDLQSNATE 295
            +  + I +        + I A  F+ +G         I V  +    +Y  D +S A  
Sbjct: 510 GQLVRTIDSAAYPVTQGAGITAVAFAPSGLAEEGSSPWILVAANGNPAVYLWDPRSGALL 569

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +     +       SPD   ++  S       +++       ++R      +       S
Sbjct: 570 KTLEADYPIEQVLLSPDGRHLLAAS----ASGIWIWNVGTGSRERTLPQPLSGLATLALS 625

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGD 413
           P G L+A +        I +      +E   +           + P G++L+       D
Sbjct: 626 PDGRLLA-SSTDHRAQQIKLWDLRSGKELRTLGGQTWMVSALLFGPDGQTLL---SGGAD 681

Query: 414 TGSKLY 419
              +++
Sbjct: 682 GAIRIW 687



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 36/239 (15%), Positives = 74/239 (30%), Gaps = 36/239 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +        D   +   D +  +  +        I     S +G   + S  
Sbjct: 391 AISPDGNLLV----AGGDDGVIRFWDPQAGQLLQSWTGHEGSIETLAISPDGTFLV-SGG 445

Query: 278 KDEAMDIYSVDLQS--------NATE-RLTNTLFINISASYSPDSSQIVFES-DREGKEQ 327
            D+ + ++ +                 +L     +  S + SPD   I   S DR     
Sbjct: 446 ADKTVRVWDLAALGDPALRSGEGVPRLQLQGHTDLINSVAISPDGRWIASGSADRT---- 501

Query: 328 LYVMQSNGSDQKR--------ISQDKEASYFDPVWSP---QGDLIAFTKFSGEKFAIGVM 376
           + + Q+      R        ++Q    +      S    +G        +    A+ + 
Sbjct: 502 IRLWQAEDGQLVRTIDSAAYPVTQGAGITAVAFAPSGLAEEGSSPWILVAANGNPAVYLW 561

Query: 377 KK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               G+  + L  D  ++    SP GR L+ +      +G  ++++   G  E  +  P
Sbjct: 562 DPRSGALLKTLEADYPIEQVLLSPDGRHLLAAS----ASGIWIWNV-GTGSRERTLPQP 615


>gi|254227527|ref|ZP_04920959.1| oligogalacturonate lyase [Vibrio sp. Ex25]
 gi|262396210|ref|YP_003288063.1| oligogalacturonate lyase [Vibrio sp. Ex25]
 gi|151940139|gb|EDN58965.1| oligogalacturonate lyase [Vibrio sp. Ex25]
 gi|262339804|gb|ACY53598.1| oligogalacturonate lyase [Vibrio sp. Ex25]
          Length = 385

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 68/191 (35%), Gaps = 28/191 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYAT 230
            F+  ++         ++   + +++ DG+N+R +    +        + P+   +AY +
Sbjct: 197 PFDDSMVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-------------LISV 276
           Y      R +Y  +       + +       L   F  +G                  S 
Sbjct: 257 YFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNF--DGSLMVGDGCDAPVDVADADSY 314

Query: 277 QKDEAMDIYSVDLQSNATERL----TNTLFINIS-------ASYSPDSSQIVFESDREGK 325
             +    +Y ++ ++ + ++L    T+   ++          S++P+   ++F SD EG 
Sbjct: 315 NIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGV 374

Query: 326 EQLYVMQSNGS 336
             +Y+     S
Sbjct: 375 PAIYIADVPES 385



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 65/192 (33%), Gaps = 28/192 (14%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDRE 323
           F+ +GK+ L +   D   + Y ++L++    +LT     N    + S D     +  +  
Sbjct: 43  FTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNEL 102

Query: 324 GKEQLYVMQSNGSDQKRIS-----QDKEASYFDPV--------------WSPQGDLIAFT 364
               L  +     +++ I           ++                  W P      F 
Sbjct: 103 ---NLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFA 159

Query: 365 KFSGEKFAIGVMKKD--GSQERLLVEDSNL-QAPTWSP-SGRSLIFSRKKDGDT-GSKLY 419
           +F        ++K D    +  ++ +D+     P + P     + F  +   D   ++++
Sbjct: 160 EFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSMVGFCHEGPHDLVDARMW 219

Query: 420 SIDLNGRNETLI 431
            ++ +G N   I
Sbjct: 220 LVNEDGSNVRKI 231



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 91/261 (34%), Gaps = 39/261 (14%)

Query: 196 MDRDGANIRYLTPSRDQIL-----FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           +D D           D I      ++  F+ + +K+ +A  D +     YL++    +A 
Sbjct: 15  VDSDTQVKVTRLTPTDVICHRNYFYQKCFTQDGKKLLFAG-DFDGNRNYYLLNLETQQAV 73

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASY 309
           +              S++ +RA   V+ +  +++  VDL++   + + T         ++
Sbjct: 74  QLTEGKGDNTFGGFISTD-ERAFFYVKNE--LNLMKVDLETLEEQVIYTVDEEWKGYGTW 130

Query: 310 --SPDSSQIV-----------------FESDREGKE--QLYVMQSNGSDQKRISQDKEAS 348
             + D +++V                 F          +L  +     + + I QD  A 
Sbjct: 131 VANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDT-AW 189

Query: 349 YFDPVWSP-QGDLIAFTKFSGEKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSG 401
              P++ P    ++ F            + ++ +DGS  R +    E  +     W P G
Sbjct: 190 LGHPIYRPFDDSMVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDG 249

Query: 402 RSLIFSRKKDGDTGSKLYSID 422
            ++ +     G T   +Y  +
Sbjct: 250 SAMAYVSYFKGQTDRVIYKAN 270



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/238 (10%), Positives = 68/238 (28%), Gaps = 37/238 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           + P      +A +   +     +         + I    + +  P +   +        +
Sbjct: 149 WQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSMVGFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ V+   +   ++             + PD S + + S  +G+    +Y 
Sbjct: 209 GPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK 268

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMK 377
                 + + +      S+    +   G L+              + + I       V+ 
Sbjct: 269 ANPETLENEEVMVMPPCSHLMSNF--DGSLMVGDGCDAPVDVADADSYNIENDPFLYVLN 326

Query: 378 KDGSQERLLVEDSNLQ------------APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 + L + S                P+++P+   ++F+   +G     +Y  D+
Sbjct: 327 TKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG--VPAIYIADV 382


>gi|318060922|ref|ZP_07979643.1| protease [Streptomyces sp. SA3_actG]
          Length = 1206

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 71/230 (30%), Gaps = 35/230 (15%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSS---NG 269
           L  PRFSP+   +A+ ++   D   ++L +   D   +++ ++         +S    +G
Sbjct: 61  LSHPRFSPDGAHLAFVSWRSLDP-EIHLAEVAGDTPVRQLTHWAGRDTRVCGWSPPDADG 119

Query: 270 KRALISVQKDEAM-----DIYSVDLQSNATERLTNTL-------FINISASYSPDSSQIV 317
           +  +++V             Y V    +    L             +       D   ++
Sbjct: 120 RSDILAVSSQGQPFSYFAWAYKVPTDGSPGGPLPWGPVAALAQRGHDG------DERTLL 173

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-----GDLIAFTKFSGEKFA 372
                  +   +  +  G    R+    E    D           GD +AF         
Sbjct: 174 LTGTPPHEPAAWK-RYRGGATGRLWLHGERLLADLDGHLDCPMFVGDRVAFLSDHEGVGN 232

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   + DGS  R   +     A   +  G  +++          +L+ +D
Sbjct: 233 VYSCRPDGSDLRRHTDHDAFYARNAASDGGRIVY------QCAGELWLVD 276



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 22/198 (11%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISAS- 308
           +R+   R+ +  PRFS +G        +    +I+  ++       +LT+    +     
Sbjct: 52  RRLTADRTKLSHPRFSPDGAHLAFVSWRSLDPEIHLAEVAGDTPVRQLTHWAGRDTRVCG 111

Query: 309 YSP---DSSQIVFESDREGKEQ-----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +SP   D    +     +G+        Y + ++GS    +     A+            
Sbjct: 112 WSPPDADGRSDILAVSSQGQPFSYFAWAYKVPTDGSPGGPLPWGPVAALAQRGHDGDERT 171

Query: 361 IAFTKFSGEKFAIGVMKKDGS-------QERLLVE-DSNLQAPTWSPSGRSLIFSRKKDG 412
           +  T     + A     + G+        ERLL + D +L  P +   G  + F    +G
Sbjct: 172 LLLTGTPPHEPAAWKRYRGGATGRLWLHGERLLADLDGHLDCPMFV--GDRVAFLSDHEG 229

Query: 413 DTGSKLYSIDLNGRNETL 430
                +YS   +G +   
Sbjct: 230 --VGNVYSCRPDGSDLRR 245



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 9/97 (9%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDP 352
             RLT          +SPD + + F S R    ++++ +  G +  ++++          
Sbjct: 51  ARRLTADRTKLSHPRFSPDGAHLAFVSWRSLDPEIHLAEVAGDTPVRQLTHWAGRDTRVC 110

Query: 353 VWSP---QGDL-IAFTKFSGEKFAI----GVMKKDGS 381
            WSP    G   I      G+ F+       +  DGS
Sbjct: 111 GWSPPDADGRSDILAVSSQGQPFSYFAWAYKVPTDGS 147



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 68/211 (32%), Gaps = 26/211 (12%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA----- 229
            R+ F+S+    G     +     DG+++R      D        S +  ++ Y      
Sbjct: 219 DRVAFLSDHEGVGN----VYSCRPDGSDLRR-HTDHDAFYARNAAS-DGGRIVYQCAGEL 272

Query: 230 ----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEAMD 283
                   + + R   +     R+ +R     +         +  G+ + ++V+      
Sbjct: 273 WLVDDLAPDAVPRRLDIRLGGPRSGRRRHQVPAARHLDAVCPDETGRASAVAVRGS---- 328

Query: 284 IYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSN----GSDQ 338
           +Y +  +      L +T  + +           + + SD  G + + +            
Sbjct: 329 LYWLTHRDGPARTLADTPGVRVRMPVLYGGGGSVAYVSDAGGADGIEIAPLPRAGTPGPV 388

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +R +  +     + V SP+GD +A     G 
Sbjct: 389 RRWAHGRLGLVEELVASPKGDRLAVATHDGR 419



 Score = 40.0 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 34/122 (27%), Gaps = 10/122 (8%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNA----TERLTNTL 301
           R  + + +F   +    FS +G     S          I    +           +T+  
Sbjct: 516 RVVEVVRSFNGPVRDLAFSPDGAWLTWSHPGVGRSLRQIKLARISEGEGPFSLIDVTDGR 575

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYV----MQSNGSDQKRISQDKEASYFDPVWSPQ 357
           F + +  ++ D   + F S R       V    +      +  +     A+      S  
Sbjct: 576 FEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPHLVTLSSATPSPFALSAD 635

Query: 358 GD 359
           G 
Sbjct: 636 GR 637



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 40/110 (36%), Gaps = 10/110 (9%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQERLL-VEDSNLQA- 394
           + +       D  +SP G  + ++      S  +  +  + +      L+ V D   +  
Sbjct: 520 VVRSFNGPVRDLAFSPDGAWLTWSHPGVGRSLRQIKLARISEGEGPFSLIDVTDGRFEDE 579

Query: 395 -PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
            P ++  GR L F   +  D    +++ DL+   G    L+   +    P
Sbjct: 580 NPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPHLVTLSSATPSP 629



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 64/201 (31%), Gaps = 15/201 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-VYLMDTRIDRAP---KRIGNF 256
           A +  +  S +  + +  FSP+   + ++       LR + L        P     + + 
Sbjct: 515 ARVVEVVRSFNGPVRDLAFSPDGAWLTWSHPGVGRSLRQIKLARISEGEGPFSLIDVTDG 574

Query: 257 RSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQ---SNATERLTNTLFINISASYSP 311
           R     P F+ +G+       +  D   D+++ DL          +T +       + S 
Sbjct: 575 RFEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPHLVTLSSATPSPFALSA 634

Query: 312 DSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKF- 366
           D           DR    +  V+        R++     +      SP  G  + + ++ 
Sbjct: 635 DGRPAAGGLDPDDRASGYEGVVIVEAEGLASRVTPFPVPASKYSSLSPVAGGGLVWLRWP 694

Query: 367 -SGEKFAIGVMKKDGSQERLL 386
            SG      V   D S    L
Sbjct: 695 ISGALGQTFVNPADTSSRPTL 715



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ- 441
            RL  + + L  P +SP G  L F   +  D    L  +  +     L +     +    
Sbjct: 52  RRLTADRTKLSHPRFSPDGAHLAFVSWRSLDPEIHLAEVAGDTPVRQLTHWAGRDTRVCG 111

Query: 442 WVG 444
           W  
Sbjct: 112 WSP 114


>gi|310822045|ref|YP_003954403.1| hypothetical protein STAUR_4798 [Stigmatella aurantiaca DW4/3-1]
 gi|309395117|gb|ADO72576.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 550

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 84/256 (32%), Gaps = 37/256 (14%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R +  +     FEP  S    +V Y  +    +  V   D         I + R   + 
Sbjct: 28  LRRVVNAGPGNQFEPHVS--GSRVVYT-HKAGGVGEVRWHDLSTGLHGT-IPDSRGYDVI 83

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----- 317
              S  G   + + +      I++ DL+            + ++          V     
Sbjct: 84  ADVS--GDSVVFT-RMLSTSAIFTYDLKKG-------GPAVEVAPQPGAHRRGAVIGHHT 133

Query: 318 -------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE- 369
                  F S  +   ++           R++QD +     P  S  G +I +TK + E 
Sbjct: 134 LVWQDYSFGSRSQ--PEITTFDLESGVLTRLTQD-DLLDRSPAVSADGRVIVWTKCAREF 190

Query: 370 --KFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLN 424
                + V  KDG + R L     +   P    +G+ ++++  +   G     +Y   + 
Sbjct: 191 DCDIWMAVAGKDGFETRALTGAQGDESQPQ--TNGQVVVYTSTRLEQGKPTQDIYWQAVE 248

Query: 425 GRNETLINTPAYASDP 440
           G  E  +  P   ++P
Sbjct: 249 GGPEYRLALPGLDANP 264



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 10/163 (6%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            S       +I + DL+S    RLT    ++ S + S D   IV+       +    M  
Sbjct: 139 YSFGSRSQPEITTFDLESGVLTRLTQDDLLDRSPAVSADGRVIVWTKCAREFDCDIWMAV 198

Query: 334 NGSD--QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQERLLV 387
            G D  + R     +     P     G ++ +T    E+      I     +G  E  L 
Sbjct: 199 AGKDGFETRALTGAQGDESQPQT--NGQVVVYTSTRLEQGKPTQDIYWQAVEGGPEYRLA 256

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                  P  S  G  L+F R+           +  + + +TL
Sbjct: 257 LPGLDANPLLS--GSLLVFERQDPSGRTLNTEVVLFDMKTQTL 297



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 52/177 (29%), Gaps = 18/177 (10%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---VQKDEAMDIY 285
            ++       +   D        R+     +  +P  S++G+  + +    + D  + + 
Sbjct: 139 YSFGSRSQPEITTFDLESGVLT-RLTQDDLLDRSPAVSADGRVIVWTKCAREFDCDIWMA 197

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKE--QLYVMQSNGSDQKRI 341
                   T  LT             +   +V+ S R  +GK    +Y     G  + R+
Sbjct: 198 VAGKDGFETRALTGAQGDESQPQ--TNGQVVVYTSTRLEQGKPTQDIYWQAVEGGPEYRL 255

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG----VMKKDGSQERLLVEDSNLQA 394
           +        +P+ S  G L+ F +       +     +          L      + 
Sbjct: 256 AL--PGLDANPLLS--GSLLVFERQDPSGRTLNTEVVLFDMKTQTLYALTRTLRNEH 308


>gi|312073207|ref|XP_003139416.1| WD40 repeat protein [Loa loa]
 gi|307765419|gb|EFO24653.1| WD40 repeat protein [Loa loa]
          Length = 411

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 96/248 (38%), Gaps = 22/248 (8%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKN----SLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            I   +GD N+R ++ ++             S  V + D   I+Y+     + +   +FS
Sbjct: 75  KIESAQGDGNTRTVYDNQKNTPNGTNTTNVPSAAVPNYD---IKYILSGHTKAVSSVKFS 131

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            +   +A ++ D      + + +T+  +  K I   +  I    +SS+  R + S   D+
Sbjct: 132 ADGSLLASSSADK----TIKVWNTQDGKIEKTITGHKLGISDICWSSD-HRLITSCSDDK 186

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ V + S   + L          +++P SS +V  S     E + V         +
Sbjct: 187 TLKIWDV-MSSKCLKTLKGHTNYVFCCNFNPQSSLVVSGSF---DESVRVWDVKTGSCIK 242

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSN--LQAPTW 397
                        ++  G LI  + + G    + +      Q  + LV+D N  +    +
Sbjct: 243 TLPAHSDPVSAVSFNRDGTLICSSSYDG---LVRIWDTANGQCVKTLVDDDNPPVSFVKF 299

Query: 398 SPSGRSLI 405
           SP+G+ ++
Sbjct: 300 SPNGKYIL 307



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 49/296 (16%), Positives = 99/296 (33%), Gaps = 37/296 (12%)

Query: 112 VTGRVIKEGKDRLRVE------FRLWDVKDRK---QIIGKKFFSSPASW---RKIAHTIS 159
               V       L          ++W+ +D K    I G K   S   W    ++  + S
Sbjct: 124 AVSSVKFSADGSLLASSSADKTIKVWNTQDGKIEKTITGHKLGISDICWSSDHRLITSCS 183

Query: 160 DD-------IYQSITGEKGDFNSRILFV------SESVVSGIIKNSLCVMDRDGANIRYL 206
           DD       +  S   +    ++  +F       S  VVSG    S+ V D    +    
Sbjct: 184 DDKTLKIWDVMSSKCLKTLKGHTNYVFCCNFNPQSSLVVSGSFDESVRVWDVKTGSCIKT 243

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRF 265
            P+    +    F+ +   +  ++YD      V + DT   +  K  + +    +   +F
Sbjct: 244 LPAHSDPVSAVSFNRDGTLICSSSYDG----LVRIWDTANGQCVKTLVDDDNPPVSFVKF 299

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--INISASYSPDSSQIVFESDRE 323
           S NGK  L +   D  + ++  + +    +  T        I A++S    + +     +
Sbjct: 300 SPNGKYIL-AATLDSTLKLWDFN-KGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSED 357

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
              ++Y+      +  +  +            P  ++IA      ++  I + K D
Sbjct: 358 --NRVYIWNLQSKEIVQTLEGHTDVVLCTDCHPTQNIIASAALENDR-TIRLWKSD 410


>gi|239617572|ref|YP_002940894.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kosmotoga olearia TBF 19.5.1]
 gi|239506403|gb|ACR79890.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kosmotoga olearia TBF 19.5.1]
          Length = 667

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 50/287 (17%), Positives = 92/287 (32%), Gaps = 69/287 (24%)

Query: 212 QILFEPRFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            +L  P  +P   +VAY        D+E   +V++ D   D +   I +F++    P +S
Sbjct: 15  PVLRTPVINPAGNRVAYVKMNTDWDDNEFRSQVWVYDAEKDSSY-PITDFKTESTMPSWS 73

Query: 267 SNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            + +         +  D+   I+       A  ++T+      S  +SPD     + S  
Sbjct: 74  PDSQTLAYLSNAGINGDKKKQIFVKRSPEEAAIQITSAPDGVDSYRWSPDGKGFFYLSTP 133

Query: 323 EGKEQ---------------------LYVMQSN------------------GSDQKRI-S 342
           E K                       LY +  +                  G D K + +
Sbjct: 134 EDKAIKKRKELYGDFEYVDKEYRTRCLYYVSIDKAISKFEETLKTPKDMRKGQDDKEVET 193

Query: 343 QDKEASYFDP--------VWSPQGDLIAFTKFSG-------EKFAIGVMKKDGSQERLLV 387
           +D     F P        V +P    + F            E+  + V   +  +   L 
Sbjct: 194 EDLAEKLFCPEDFLIVNFVITPDSKRVLFIAVPPPSTANNMEESELYVFDLESKKIEKLG 253

Query: 388 EDSNLQAPTWSPSGRSLIFS---RKKDGDTGSKLYSIDL-NGRNETL 430
                     SP+GR L ++    +    + + L  +DL  G+ E +
Sbjct: 254 ISRLRPDFHLSPNGRKLAYTLTKEEYPWQSNNPLEILDLETGKREKI 300



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 17/103 (16%), Positives = 37/103 (35%), Gaps = 10/103 (9%)

Query: 352 PVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSL 404
           PV +P G+ +A+ K + +      +  + V   +      + +       P+WSP  ++L
Sbjct: 20  PVINPAGNRVAYVKMNTDWDDNEFRSQVWVYDAEKDSSYPITDFKTESTMPSWSPDSQTL 79

Query: 405 IFSRKKD--GDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
            +       GD   +++           I +     D  +W  
Sbjct: 80  AYLSNAGINGDKKKQIFVKRSPEEAAIQITSAPDGVDSYRWSP 122



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 60/165 (36%), Gaps = 13/165 (7%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRI--DRAPKRIGNFRSMILAPRF--SSNGKRALISV 276
           P+ ++V +                    D   K+I       L P F  S NG++   ++
Sbjct: 215 PDSKRVLFIAVPPPSTANNMEESELYVFDLESKKIEKLGISRLRPDFHLSPNGRKLAYTL 274

Query: 277 QKDEAMD-----IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            K+E        +  +DL++   E++   + ++        + + ++ S +EG  ++ V 
Sbjct: 275 TKEEYPWQSNNPLEILDLETGKREKI--HIDVDSIIEIVAYTKKGLYISWKEGT-RIKVG 331

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGV 375
             N   +     D  ++      S   D +   K +  E F I +
Sbjct: 332 WLNPDGKIETLTDDNSTVSWSAVSRDTDKLVCIKATPIEPFDIYL 376



 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 9/145 (6%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I     S  + + ++ L V D +   I  L  SR +  F    SPN +K+AY    +E  
Sbjct: 223 IAVPPPSTANNMEESELYVFDLESKKIEKLGISRLRPDFH--LSPNGRKLAYTLTKEEYP 280

Query: 237 LRVY----LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +      ++D    +  K   +  S+I    ++  G    IS ++   + +  ++    
Sbjct: 281 WQSNNPLEILDLETGKREKIHIDVDSIIEIVAYTKKG--LYISWKEGTRIKVGWLNPDGK 338

Query: 293 ATERLTNTLFINISASYSPDSSQIV 317
               LT+       ++ S D+ ++V
Sbjct: 339 IET-LTDDNSTVSWSAVSRDTDKLV 362


>gi|332701614|ref|ZP_08421702.1| hypothetical protein Desaf_0453 [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332551763|gb|EGJ48807.1| hypothetical protein Desaf_0453 [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 421

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 85/260 (32%), Gaps = 32/260 (12%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +  +      FNS    ++  V     + ++ V   DG     +  S    ++ P F+P 
Sbjct: 188 HNFVNVWSLAFNSDASRLAAEVRLSQYEYTIAV---DGKPWEQIFQS----VWAPCFNPT 240

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              V                    +    ++ + +       FS  G+R           
Sbjct: 241 SGGVVAPVRMGGKWFLCEDGRKLWNTPFTQLWSQK-------FSPGGERLAAIAATGLGH 293

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
               VD      E+  +   +    ++SP+   +         +  + +  +G    +  
Sbjct: 294 WTVVVD--GQPWEQ--SFNGVVTDLTFSPNGRSLA---CMGKDDNAWWVMVDG----QRW 342

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSG 401
                  F P +SP G   A     G ++++ V   DG   ++  ED ++   PT+ P  
Sbjct: 343 CGGYERAFAPQFSPDGKHCAVRLERGGRYSLCV---DG---KVYSEDFDMLWDPTFGPES 396

Query: 402 RSLIFSRKKDGDTGSKLYSI 421
             ++    KDG    ++ S+
Sbjct: 397 DRILIRAIKDGKYLRRVASL 416


>gi|229028007|ref|ZP_04184159.1| Acylamino-acid-releasing enzyme [Bacillus cereus AH1271]
 gi|228733245|gb|EEL84075.1| Acylamino-acid-releasing enzyme [Bacillus cereus AH1271]
          Length = 655

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 11/115 (9%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           SA+ S D   + F        D   +  +++ + +      ++   +     P+WSP   
Sbjct: 22  SANISDDGKNVAFVKKKANWKDNTYRNHVWIYEKDKEQSYPLTT-GDIDSTHPLWSPDAK 80

Query: 360 LIAFTKFSGEKFA---IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKK 410
            IA+ +  G+      I V   DG  E  + +    +    W P+G+   +  + 
Sbjct: 81  AIAYLRTGGDGGNTNQIFVKSIDGGSEVQITDVKEGVNTFKWDPTGKGFYYIAQS 135



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/289 (12%), Positives = 87/289 (30%), Gaps = 58/289 (20%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR----IGNFRSMILAPRFSS 267
            +L     S + + VA+           Y     I    K     +         P +S 
Sbjct: 18  PVLSSANISDDGKNVAFVKKKANWKDNTYRNHVWIYEKDKEQSYPLTTGDIDSTHPLWSP 77

Query: 268 NGKRALISVQKDEAM---DIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDRE 323
           + K         +      I+   +   +  ++T+    +N    + P      + +  +
Sbjct: 78  DAKAIAYLRTGGDGGNTNQIFVKSIDGGSEVQITDVKEGVNTF-KWDPTGKGFYYIAQSK 136

Query: 324 ------------------GKEQ----LY------VMQSNGSDQK-----RISQDKEASYF 350
                             GKE     LY      V+Q++  ++K     +++  K+    
Sbjct: 137 ECGEIKKRKEQYGDFHHVGKEHRNNCLYYIELEKVIQNDKEERKINGVYQLADGKDFYIH 196

Query: 351 DPVWSPQGDLIA-FTKFSGEKF---AIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLI 405
           +   S  G  +      S   +    + ++  +  + + +  D+ L  +  +SP G  + 
Sbjct: 197 NFDISNDGKKVVCMATPSLNDYMNGDLYILDVEAGELQKMNMDTLLGGSVCFSPEGDKIC 256

Query: 406 FSRKKDG---------DTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
           ++              D+  ++Y ++  G     +        P QW  
Sbjct: 257 YAASIREKDYYKNHIQDSTLEIYDMN-TGEIIQPLTDFDSTIMPLQWTA 304



 Score = 43.1 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 98/311 (31%), Gaps = 62/311 (19%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY--ATYD 232
           + FV +         +N + + ++D     Y   + D     P +SP+ + +AY     D
Sbjct: 32  VAFVKKKANWKDNTYRNHVWIYEKD-KEQSYPLTTGDIDSTHPLWSPDAKAIAYLRTGGD 90

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------------- 277
             +  ++++         + I + +  +   ++   GK      Q               
Sbjct: 91  GGNTNQIFVKSIDGGSEVQ-ITDVKEGVNTFKWDPTGKGFYYIAQSKECGEIKKRKEQYG 149

Query: 278 -------KDEAMDIYSVDLQS-----------NATERLTNTLFINISAS-YSPDSSQIVF 318
                  +     +Y ++L+            N   +L +     I     S D  ++V 
Sbjct: 150 DFHHVGKEHRNNCLYYIELEKVIQNDKEERKINGVYQLADGKDFYIHNFDISNDGKKVVC 209

Query: 319 ESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---------- 364
            +     +     LY++     + ++++ D         +SP+GD I +           
Sbjct: 210 MATPSLNDYMNGDLYILDVEAGELQKMNMDTLLG-GSVCFSPEGDKICYAASIREKDYYK 268

Query: 365 -KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    I  M   G   + L +  +   P  W+  G  + +       T  ++  + 
Sbjct: 269 NHIQDSTLEIYDMNT-GEIIQPLTDFDSTIMPLQWTAKGILIRW----QDKTNYRIGLLC 323

Query: 423 LNGRNETLINT 433
            +G  E L  T
Sbjct: 324 EDGTVEMLSET 334


>gi|225554556|gb|EEH02853.1| secreted dipeptidyl peptidase DppV [Ajellomyces capsulatus G186AR]
          Length = 718

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 90/308 (29%), Gaps = 68/308 (22%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           GK +    A  R  +  I D IY   T     + +       S             D D 
Sbjct: 146 GKLYNKEQAEKRYSSARIYDSIY---TRHWDTWLTPEFNAIFSGTLKKGYGHAYTFDGDL 202

Query: 201 ANIRYLTPSRDQILFEPRF--------SPNQQKVAYAT---------------YDDEDIL 237
            N+  ++P +      P F        SP+ + VA+ +               +      
Sbjct: 203 HNL--VSPVKHAECPGPPFGGAGDYDLSPDGKTVAFMSKAPELPKANLTTSYIFIVPHDG 260

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQS 291
                     ++   +        +P FS + K+         S + D    +Y   L  
Sbjct: 261 SSVAFPINGPKSGAAVNGIVGASSSPAFSPDSKKIAYLQMEERSYEADRRT-VYVSTLDG 319

Query: 292 NATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +    L +    + S     ++PD   +    +   + +L+ + ++ S          A+
Sbjct: 320 SKIISLASN--WDRSPDALKWAPDGESLYLSVEDRARGRLFTLPADAS----------AN 367

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGR-S 403
           Y    ++  G + AF                     +L   + + +       SP  +  
Sbjct: 368 YVPKNFTDHGIISAFHFLKDS-------------PSVLTTTTTIWSNAIYTIASPDEKPK 414

Query: 404 LIFSRKKD 411
           ++FS  + 
Sbjct: 415 ILFSANEH 422



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 75/206 (36%), Gaps = 17/206 (8%)

Query: 191 NSLCVMDRDGANIRYLTPSRD---------QILFEPRFSPNQQKVAYATYDDE----DIL 237
           + + ++  DG+++ +                    P FSP+ +K+AY   ++     D  
Sbjct: 251 SYIFIVPHDGSSVAFPINGPKSGAAVNGIVGASSSPAFSPDSKKIAYLQMEERSYEADRR 310

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---T 294
            VY+      +      N+     A +++ +G+   +SV+      ++++   ++A    
Sbjct: 311 TVYVSTLDGSKIISLASNWDRSPDALKWAPDGESLYLSVEDRARGRLFTLPADASANYVP 370

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +  T+   I  +  +  DS  ++  +       +Y + S     K +    E        
Sbjct: 371 KNFTDH-GIISAFHFLKDSPSVLTTTTTIWSNAIYTIASPDEKPKILFSANEHDAELAGL 429

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDG 380
            P+     +   +  K    ++K +G
Sbjct: 430 GPEDIEEFYFDGNWTKIHSWIVKPEG 455



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 25/138 (18%)

Query: 310 SPDSSQIVFESDREGKEQ-------LYVMQSNGSDQKRISQDKE---------ASYFDPV 353
           SPD   + F S      +       ++++  +GS         +          +   P 
Sbjct: 228 SPDGKTVAFMSKAPELPKANLTTSYIFIVPHDGSSVAFPINGPKSGAAVNGIVGASSSPA 287

Query: 354 WSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIF 406
           +SP    IA+ +     +      + V   DGS+   L  + +       W+P G SL  
Sbjct: 288 FSPDSKKIAYLQMEERSYEADRRTVYVSTLDGSKIISLASNWDRSPDALKWAPDGESLYL 347

Query: 407 SRKKDGDTGSKLYSIDLN 424
           S   +     +L+++  +
Sbjct: 348 S--VEDRARGRLFTLPAD 363



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 39/124 (31%), Gaps = 25/124 (20%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVED-------- 389
                 D   SP G  +AF   + E          I ++  DGS     +          
Sbjct: 218 PFGGAGDYDLSPDGKTVAFMSKAPELPKANLTTSYIFIVPHDGSSVAFPINGPKSGAAVN 277

Query: 390 ---SNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDP--- 440
                  +P +SP  + + + + ++    +    +Y   L+G     + +  +   P   
Sbjct: 278 GIVGASSSPAFSPDSKKIAYLQMEERSYEADRRTVYVSTLDGSKIISLASN-WDRSPDAL 336

Query: 441 QWVG 444
           +W  
Sbjct: 337 KWAP 340


>gi|298492446|ref|YP_003722623.1| WD40 domain-containing protein ['Nostoc azollae' 0708]
 gi|298234364|gb|ADI65500.1| WD40 repeat, subgroup ['Nostoc azollae' 0708]
          Length = 657

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 86/278 (30%), Gaps = 48/278 (17%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL---- 237
           E+ VSG    ++ + D     + +        +    FS + QK+A ++YD    L    
Sbjct: 391 ETFVSGSADKNIKIWDIQTGELIHTLTGHSNYVCSVAFSADGQKIASSSYDKTFKLWNCL 450

Query: 238 -------------------------------RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                                           + + D   +R    + +  + I    F+
Sbjct: 451 KSKTFIEHSDCVTSVAFNYDGNTLATASLDKTIKIWDLNTERLIYTLTDHANYINCVIFT 510

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G++  IS   D+ + I+SV  Q      +T       + + SPD       S     +
Sbjct: 511 LDGQKL-ISCDSDKTIKIWSV-KQGLEIVSITGHTDAVNTIAISPDGKIFATGSH---DK 565

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +     ++          S     +SP G  +           I +   +  +    
Sbjct: 566 TIKLWYLATAELLHSFNGHINSVTSVAFSPDGKTLVSGSSDNT---IKLWNLESKELINT 622

Query: 387 V--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                S++ +  +S  G  +I       D   K++  D
Sbjct: 623 FSEHSSSINSVAFSVDGNKII---SGSADNTIKIWQFD 657



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 87/267 (32%), Gaps = 32/267 (11%)

Query: 127 EFRLWDVKDRKQIIGKKFFSS-------PASWRKIAHTISDDIYQ-------SITGEKGD 172
             ++WD++  + I      S+        A  +KIA +  D  ++           E  D
Sbjct: 401 NIKIWDIQTGELIHTLTGHSNYVCSVAFSADGQKIASSSYDKTFKLWNCLKSKTFIEHSD 460

Query: 173 FNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             + + F     ++ +  +  ++ + D +   + Y        +    F+ + QK+    
Sbjct: 461 CVTSVAFNYDGNTLATASLDKTIKIWDLNTERLIYTLTDHANYINCVIFTLDGQKLISCD 520

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D      + +   +       I      +     S +GK    +   D+ + ++ +   
Sbjct: 521 SDK----TIKIWSVKQGLEIVSITGHTDAVNTIAISPDGK-IFATGSHDKTIKLWYL--- 572

Query: 291 SNATERL-TNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
               E L +    IN   S ++SPD   +V  S       + +      +      +  +
Sbjct: 573 -ATAELLHSFNGHINSVTSVAFSPDGKTLVSGSS---DNTIKLWNLESKELINTFSEHSS 628

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           S     +S  G+ I  +  +     I 
Sbjct: 629 SINSVAFSVDGNKII-SGSADNTIKIW 654


>gi|218261866|ref|ZP_03476551.1| hypothetical protein PRABACTJOHN_02222 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223714|gb|EEC96364.1| hypothetical protein PRABACTJOHN_02222 [Parabacteroides johnsonii
           DSM 18315]
          Length = 830

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/378 (12%), Positives = 112/378 (29%), Gaps = 84/378 (22%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S   + ++     +    +     +L D    + ++  K F   A W             
Sbjct: 198 SPNGKYVLVKYYTRMEGGKSEQYAQLRDAATGQILLQDKGFILTADW------------- 244

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                     S  ++ + + ++G       ++  D A ++    + +       F+P+++
Sbjct: 245 -------MPTSNKMYFTRTGMNGKE-----LVTVDPATMQEEILAENLPEGSFSFTPDEK 292

Query: 225 KVAYATYD---------------------DEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            + Y   +                       +   ++  D +     +++    +     
Sbjct: 293 TLLYTIQEEGPKDGPDMLRILEPNDRLPGFRNRYFIWRYDLQTGLY-EQLTYGHNNTFIN 351

Query: 264 RFSSNGKRALISVQKDEAMDI-------YSVDLQSNATERLTNTLFINISASYSPDSSQ- 315
             S++ +  L S  + +   +       Y +DLQ+   + L         A++SPD  Q 
Sbjct: 352 DVSADSRYLLFSTSEQDYTSLPHSSNSMYKLDLQTMTVDTLWEKAQYINGATFSPDGKQL 411

Query: 316 IVFES----------------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +VF S                      QL++        K +++D   +     WS    
Sbjct: 412 MVFGSGNAFDNIGLNIKEGQISNTYDGQLFLYDPATRKAKALTKDFNPNVTSAQWSKFDG 471

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--------QAPTWSPSGRSL-----IF 406
            I       +   I        + R L    ++         AP     G+S+     ++
Sbjct: 472 QIYMLTEDQDYQRIYTCNPVNGKIRRLDLPEDVIYNYSLAETAPVMYYYGQSVSNANRLY 531

Query: 407 SRKKDGDTGSKLYSIDLN 424
           S     +    +Y +  +
Sbjct: 532 SYNTKNNKTQLIYDLSAD 549



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 45/109 (41%), Gaps = 4/109 (3%)

Query: 308 SYSPDSSQI---VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S SP+   +    +     GK + Y    + +   +I    +       W P  + + FT
Sbjct: 196 SISPNGKYVLVKYYTRMEGGKSEQYAQLRD-AATGQILLQDKGFILTADWMPTSNKMYFT 254

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +       +  +     QE +L E+    + +++P  ++L+++ +++G 
Sbjct: 255 RTGMNGKELVTVDPATMQEEILAENLPEGSFSFTPDEKTLLYTIQEEGP 303


>gi|300787322|ref|YP_003767613.1| WD40 domain-containing protein [Amycolatopsis mediterranei U32]
 gi|299796836|gb|ADJ47211.1| WD40 domain-containing protein [Amycolatopsis mediterranei U32]
          Length = 411

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 77/258 (29%), Gaps = 59/258 (22%)

Query: 210 RDQILFEPRFSPNQQKVAYATY-------DDEDILRVYLMDTRIDRAPKRI-----GNFR 257
            D     P  S + + +AY ++       D   +  V+  D + DR  +          R
Sbjct: 132 GDDDSLHPAISADGRFIAYDSFAGNLVAGDTNRVRDVFEYDQQSDRTVRVSVDSNSTEVR 191

Query: 258 SMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLT------NTLFI 303
                P  S++G+                ++  D++  D  +  T+R++           
Sbjct: 192 GASRLPSISADGRYVTFESDATTLTGSDTNQTTDVFVHDKLTGLTDRVSVNAHGDQGQGA 251

Query: 304 NISASYSPDSSQIVFES----------DREGKEQLYVMQSNGSDQKRISQ--------DK 345
           +  ++ S D   I ++S          D  GK   +++    S   R++         D 
Sbjct: 252 STFSTMSADGRYIAYQSAAGNLLPNPGDTNGKVDNFLVDRQTSTVTRLNVLYTGGQDIDG 311

Query: 346 EASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVEDSNLQA--- 394
                 P  S  G   AF  F              + V  +D +         N      
Sbjct: 312 TTEGVRPSISADGRYTAFDSFAWRLVPFDRNSAADVFVRDRDTATTTRASVAGNGAEGNG 371

Query: 395 ----PTWSPSGRSLIFSR 408
               P+ S  G+ + F  
Sbjct: 372 ISATPSISADGKHVAFQS 389



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 59/202 (29%), Gaps = 42/202 (20%)

Query: 258 SMILAPRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLT------NTLFI 303
            M   P  S++G+                +   D++  D  +  T R++           
Sbjct: 18  GMSGEPSVSADGRYVAFRSSARNLVGGDTNGVDDVFVRDRVAGVTTRVSVDRNGAEGNGA 77

Query: 304 NISASYSPDSSQIVFESDREGK--------EQLYVMQSNGSDQKRISQD-----KEASYF 350
           + + S S D   + F SD              ++V         R+S        +    
Sbjct: 78  SWAPSISADGRYVAFVSDSTNLVPGDTNVFRDVFVHDRLIGWTSRVSGGSLGAPGDDDSL 137

Query: 351 DPVWSPQGDLIAFTKFSGE--------KFAIGVMKKDGSQERLLVEDSNLQA-------P 395
            P  S  G  IA+  F+G            +    +   +   +  DSN          P
Sbjct: 138 HPAISADGRFIAYDSFAGNLVAGDTNRVRDVFEYDQQSDRTVRVSVDSNSTEVRGASRLP 197

Query: 396 TWSPSGRSLIFSRKKDGDTGSK 417
           + S  GR + F       TGS 
Sbjct: 198 SISADGRYVTFESDATTLTGSD 219



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 81/283 (28%), Gaps = 62/283 (21%)

Query: 212 QILFEPRFSPNQQKVAYATY-------DDEDILRVYLMDTRIDRAPKR-----IGNFRSM 259
            +  EP  S + + VA+ +        D   +  V++ D       +             
Sbjct: 18  GMSGEPSVSADGRYVAFRSSARNLVGGDTNGVDDVFVRDRVAGVTTRVSVDRNGAEGNGA 77

Query: 260 ILAPRFSSNGKRALISV--------QKDEAMDIYSVDLQSNATERLTNT----LFINIS- 306
             AP  S++G+                +   D++  D     T R++         + S 
Sbjct: 78  SWAPSISADGRYVAFVSDSTNLVPGDTNVFRDVFVHDRLIGWTSRVSGGSLGAPGDDDSL 137

Query: 307 -ASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQDKE-----ASYFDP 352
             + S D   I ++S        D      ++          R+S D        +   P
Sbjct: 138 HPAISADGRFIAYDSFAGNLVAGDTNRVRDVFEYDQQSDRTVRVSVDSNSTEVRGASRLP 197

Query: 353 VWSPQGDLIAF--------TKFSGEKFAIGVMK-KDGSQERLLVE------DSNLQAPTW 397
             S  G  + F           + +   + V     G  +R+ V              T 
Sbjct: 198 SISADGRYVTFESDATTLTGSDTNQTTDVFVHDKLTGLTDRVSVNAHGDQGQGASTFSTM 257

Query: 398 SPSGRSLIFSRKKD------GDTGSKL--YSIDLNGRNETLIN 432
           S  GR + +           GDT  K+  + +D      T +N
Sbjct: 258 SADGRYIAYQSAAGNLLPNPGDTNGKVDNFLVDRQTSTVTRLN 300


>gi|253568719|ref|ZP_04846130.1| peptidase [Bacteroides sp. 1_1_6]
 gi|251842792|gb|EES70872.1| peptidase [Bacteroides sp. 1_1_6]
          Length = 744

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 76/246 (30%), Gaps = 50/246 (20%)

Query: 210 RDQILFEPRFSPNQQKVA----------YATYDDE------------------------D 235
            +      R+SP+ +KVA          Y  Y +                          
Sbjct: 199 GNYYSAYIRWSPDSKKVASCKIRPVEKRYVYYVESSPSDQLQPKLHKQEYAKPGDELPFK 258

Query: 236 ILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSN 292
           I  +Y ++T     P   + + +  I AP ++S+ +       +        +     + 
Sbjct: 259 IPCIYDVETGHSVIPSTDLFSQQYYITAPEWNSDSQAITFEYNQRGHQVYRVLEFSAATG 318

Query: 293 ATERL---TNTLFINISASYSPD---SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
               L   T+  ++N S  +  D     ++++ S+R+    LY+     +   R     E
Sbjct: 319 KVRPLIEETSDKYVNYSRRFRHDLQNGKRMIWMSERDNWNHLYMYDRTTAQPIRQITKGE 378

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
               D +   + + + +   +G +            +  DG     L     +    +S 
Sbjct: 379 WYVRDILRVDETNQLIYFSANGVQAKEDPYLIRYYRIGFDGKNLTCLTPTEGMHNAWFSK 438

Query: 400 SGRSLI 405
             + L+
Sbjct: 439 DMQYLV 444



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/353 (13%), Positives = 104/353 (29%), Gaps = 86/353 (24%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           ++ ++ S    +    +   +   +   G I     ++D D  N + L   +        
Sbjct: 37  ANKVFYSNVNPEWIGKTHYFWYVRNTPDGRI---YVLVDADTQNRKDLFDHKLVAAALSE 93

Query: 219 FSPNQQKV-------------------AYATYDDEDILRV---YLMDTRIDRAPKRIGNF 256
            S   +K+                    +   +   +  +    L D      P++  ++
Sbjct: 94  AS--GRKIEATSLYLDRLSVNNGLDTLHFVFNNHRWMYVIDKNQLTDEGALPTPRKQRHW 151

Query: 257 ----RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISAS 308
                    AP  S + K         +  +IY  +  +   ++L    T   + +    
Sbjct: 152 METDDEKTAAPVTSPDKKYTAFI----KNHNIYVKETATGKEKQLSLDGTLGNYYSAYIR 207

Query: 309 YSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRI-------------------------- 341
           +SPDS ++     R   K  +Y ++S+ SDQ +                           
Sbjct: 208 WSPDSKKVASCKIRPVEKRYVYYVESSPSDQLQPKLHKQEYAKPGDELPFKIPCIYDVET 267

Query: 342 ---------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLLVEDS 390
                       ++     P W+     I F           V+       + R L+E++
Sbjct: 268 GHSVIPSTDLFSQQYYITAPEWNSDSQAITFEYNQRGHQVYRVLEFSAATGKVRPLIEET 327

Query: 391 NLQAPTWSP-------SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           + +   +S        +G+ +I+  ++D    + LY  D          T   
Sbjct: 328 SDKYVNYSRRFRHDLQNGKRMIWMSERDN--WNHLYMYDRTTAQPIRQITKGE 378


>gi|188025416|ref|ZP_02958536.2| hypothetical protein PROSTU_00278 [Providencia stuartii ATCC 25827]
 gi|188023702|gb|EDU61742.1| hypothetical protein PROSTU_00278 [Providencia stuartii ATCC 25827]
          Length = 442

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 51/135 (37%), Gaps = 13/135 (9%)

Query: 256 FRSMILAPR-F---SSNGKRALISVQKD-EAMDIYSVDLQSNATERLTN-TLFINISASY 309
           +  +   PR +   S +G+     ++ D   + ++     + + +++T  +  I  + S+
Sbjct: 311 YPGLAKQPRHWLRSSPDGRFIACLMKDDNGVVQLWLASTSTGSLKQITQCSSSIQSAFSW 370

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFS 367
                 I F  D      +        + +R++     +      V+SP   LIAF +  
Sbjct: 371 DSQGKHIAFICDNS----VMRCNVISGELERLTVRSATAPVADAVVFSPDDRLIAFMRDD 426

Query: 368 GEKFA-IGVMKKDGS 381
            + +  I +++    
Sbjct: 427 TKGYRQIHIVETGLG 441



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 50/142 (35%), Gaps = 17/142 (11%)

Query: 293 ATERLT-----NTLFINISAS-Y---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRIS 342
              RLT         +      +   SPD   I     D  G  QL++  ++    K+I+
Sbjct: 299 QQRRLTFTHERQYPGLAKQPRHWLRSSPDGRFIACLMKDDNGVVQLWLASTSTGSLKQIT 358

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSP 399
           Q   +      W  QG  IAF           V+   G  ERL V  +      A  +SP
Sbjct: 359 QCSSSIQSAFSWDSQGKHIAFIC-DNSVMRCNVIS--GELERLTVRSATAPVADAVVFSP 415

Query: 400 SGRSLIFSRKKDGDTGSKLYSI 421
             R + F R  D     +++ +
Sbjct: 416 DDRLIAFMRD-DTKGYRQIHIV 436



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 72/213 (33%), Gaps = 26/213 (12%)

Query: 139 IIGKKFFSSPASW--RKIA-----HTISDDIYQSITG-----EKGDFNSRILFVSESVVS 186
           I  K + S    W  R IA     H++  +I   I       ++  F  +  F  +   S
Sbjct: 230 IGQKGYLSDNGQWQSRAIAFIGDTHSLDGEIIPEIFIVDLPEDENAFMQQGDFPLQGTDS 289

Query: 187 --GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                  ++        + R       Q     R SP+ + +A    DD  +++++L  T
Sbjct: 290 RLPFPPKNIQQRRLTFTHERQYPGLAKQPRHWLRSSPDGRFIACLMKDDNGVVQLWLAST 349

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +      S+  A  + S GK             +   ++ S   ERLT      
Sbjct: 350 STGSLKQITQCSSSIQSAFSWDSQGKHIAFICDNS----VMRCNVISGELERLTVRSA-- 403

Query: 305 ISA-----SYSPDSSQIVFESDRE-GKEQLYVM 331
            +       +SPD   I F  D   G  Q++++
Sbjct: 404 TAPVADAVVFSPDDRLIAFMRDDTKGYRQIHIV 436



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 15/125 (12%)

Query: 337 DQKRISQDKEASY--------FDPVWSPQGDLIA-FTKFSGEKFAIGVMKKDGSQERLLV 387
            Q+R++   E  Y             SP G  IA   K       + +        + + 
Sbjct: 299 QQRRLTFTHERQYPGLAKQPRHWLRSSPDGRFIACLMKDDNGVVQLWLASTSTGSLKQIT 358

Query: 388 E--DSNLQAPTWSPSGRSLIF----SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +   S   A +W   G+ + F    S  +      +L  + +      + +   ++ D +
Sbjct: 359 QCSSSIQSAFSWDSQGKHIAFICDNSVMRCNVISGELERLTVRSATAPVADAVVFSPDDR 418

Query: 442 WVGFM 446
            + FM
Sbjct: 419 LIAFM 423


>gi|168702474|ref|ZP_02734751.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 1114

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 72/220 (32%), Gaps = 18/220 (8%)

Query: 218 RFSPNQQKVAYATYDDE-------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            F+P+  ++A  +++           + V+ +         ++      + A  FS +G 
Sbjct: 470 TFAPDSMRLAAWSHESAVNASVAVTDVSVWNVADGAHEYTLQVAPKGGAVSAVAFSPDGT 529

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
               +   D  + +++          LT          + PD + I       G  ++  
Sbjct: 530 TVA-TAAGDRRLRLWNA-ADGTWRADLTADADPLAYVGFQPDGTLI-----EAGGGRVRF 582

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVED 389
             +    Q R     E +    + S  G L+A     G     +   ++ G+   +   D
Sbjct: 583 WDTVRGAQSRPPVRAEDTADAYLLSGDGTLLARAGLFGAGMREVATGREIGAGAGMP--D 640

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             + A  ++P GRS++ +       G  LY  D       
Sbjct: 641 GLVHAVAFAPDGRSVV-TAAYSESAGGSLYLWDATDGKLR 679



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/355 (14%), Positives = 105/355 (29%), Gaps = 55/355 (15%)

Query: 73  LQRSDVF----NLISQDSFKQKITN-PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           L R+ +F      ++           PD +     +   G + +VT    +     L   
Sbjct: 613 LARAGLFGAGMREVATGREIGAGAGMPDGLVHAVAFAPDG-RSVVTAAYSESAGGSL--- 668

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             LWD  D K + G+    +        H     I   +        S          + 
Sbjct: 669 -YLWDATDGK-LRGQAGTGT-------GH-----IIWGLDIAPDGAVSVASVPLYRNPAP 714

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +        +G      +            SP+++ VA AT D     RV   D    
Sbjct: 715 RTRVMTW---AEGLGRPPASYPLPAGTRCGASSPDRRYVAAATGD-----RVVFCDRATG 766

Query: 248 RAPKRIGNFRSMILAPRFSSNG----------KRALISVQKDEAMDIYSVDLQSNATERL 297
           +  + +   +    +  FS++G          +R  +    D     +       A  + 
Sbjct: 767 QEVRAL-PIKCQANSLAFSADGSCVGVLDVSARRVTVCSLVDGRQTAW--PRDDGAAVQF 823

Query: 298 TNTLFINISASYSPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + +       + SPD        + R+G+ ++    +     +  ++       + V+SP
Sbjct: 824 SLSP-----LALSPDGRLFAVCVAGRDGRLRVIETATGAELWQADARLSGLPAPEFVFSP 878

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRK 409
            G  +A     G    + V +    +ER           +  +SP  R +  +  
Sbjct: 879 DGRTLAAAGRDGT---VRVWEVATGEERYRFSGHRAGVFSVAYSPDSRRVASASY 930



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 84/255 (32%), Gaps = 55/255 (21%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNG 269
           D ++    F+P+ + V  A Y +     +YL D    +   + G     I+     + +G
Sbjct: 640 DGLVHAVAFAPDGRSVVTAAYSESAGGSLYLWDATDGKLRGQAGTGTGHIIWGLDIAPDG 699

Query: 270 KRALIS--VQKDEAMDIYSVDLQSNATERLTNTL---FINISASYSPD--------SSQI 316
             ++ S  + ++ A     +           +          AS SPD          ++
Sbjct: 700 AVSVASVPLYRNPAPRTRVMTWAEGLGRPPASYPLPAGTRCGAS-SPDRRYVAAATGDRV 758

Query: 317 VFESDREGKEQLYVMQ-----------SNGS-------DQKRISQDKEASYFDPVWS-PQ 357
           VF  DR   +++  +            ++GS         +R++           W    
Sbjct: 759 VFC-DRATGQEVRALPIKCQANSLAFSADGSCVGVLDVSARRVTVCSLVDGRQTAWPRDD 817

Query: 358 GDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDS-----------NLQAP--TWS 398
           G  + F+         G  FA+ V  +DG    +                 L AP   +S
Sbjct: 818 GAAVQFSLSPLALSPDGRLFAVCVAGRDGRLRVIETATGAELWQADARLSGLPAPEFVFS 877

Query: 399 PSGRSLIFSRKKDGD 413
           P GR+L  +  +DG 
Sbjct: 878 PDGRTLA-AAGRDGT 891



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 49/252 (19%), Positives = 95/252 (37%), Gaps = 36/252 (14%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
             R        F P  + +  A  DD     V++ D    R   R+ +   +  A   + 
Sbjct: 337 TGRMGFTSSVAFGPGAKSLLSAHGDD----VVHVWDPVTGRERPRL-DAPRLCTAVSATP 391

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFI-NISASYSPDSSQIVFESDREG 324
           +G+R +       A ++++ DL +N    L  T    I   S + SP+   +   S    
Sbjct: 392 DGRRLV----GVGASEVWAWDLAANPPAVLWKTQQPRIVRGSIAISPNGRLVAHGSV--- 444

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMK------ 377
           K  + ++ +   D+ R +     S     ++P    + A++  S    ++ V        
Sbjct: 445 KGTVVLLDAATGDELR-TFPAVGS--GLTFAPDSMRLAAWSHESAVNASVAVTDVSVWNV 501

Query: 378 KDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            DG+ E   ++  +   + A  +SP G ++       GD   +L++   +G     +   
Sbjct: 502 ADGAHEYTLQVAPKGGAVSAVAFSPDGTTVA---TAAGDRRLRLWNA-ADGTWRADLTAD 557

Query: 435 AYASDP-QWVGF 445
           A   DP  +VGF
Sbjct: 558 A---DPLAYVGF 566


>gi|159489332|ref|XP_001702651.1| flagellar associated protein [Chlamydomonas reinhardtii]
 gi|158280673|gb|EDP06430.1| flagellar associated protein [Chlamydomonas reinhardtii]
          Length = 1732

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 67/193 (34%), Gaps = 16/193 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             VVSG     +CV ++D  N ++ L  +  + +     S +   +A  +   +D + ++
Sbjct: 707 NRVVSGDNHGMICVWEKDSGNSVQTLPLAHSKAVLSVSISADGSTIA--SVGADDKVSIW 764

Query: 241 LMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +D  I    + +    +M   P    FS +G +  ++   +  + +++V         +
Sbjct: 765 NVDIGI----ELVSLTAAMESHPLYCSFSPDGNKLAVTES-NGNVMVWNV-AAGCQWYMI 818

Query: 298 TN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                      S+S D  +  F +         V  + G         K         SP
Sbjct: 819 YQAHKGKVTGCSWSADCRK--FTTC-GTDSVTAVWDAEGGQPLFKFNLKAGPLTSCAVSP 875

Query: 357 QGDLIAFTKFSGE 369
            G  +A    +G 
Sbjct: 876 SGLYVAAGSTTGT 888



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 53/320 (16%), Positives = 102/320 (31%), Gaps = 40/320 (12%)

Query: 130 LWDVKDRKQI--------IGKKFFSSPASWRKIA---------HTISDDIYQSITGEKGD 172
           +WDV    +I            F S P  +R            H     +   +T +   
Sbjct: 511 VWDVATASKIRVFDFVMDKAGDFKSPPHPYRWAVAHNSTVLFDHESEALVLDMLTIDDPL 570

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
             S  L   +++ SG     L V    G+N      +    +    FS + + V      
Sbjct: 571 LRSYYLADVQTIASGFNHRKLLVWSAAGSNAPDKFHTTHDAITSTHFSHDDRLVV---MG 627

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +D   V       +     +G+        + S++ +  L S   D  + ++  D +  
Sbjct: 628 TQDGNVVVYDVVHGETVEMIVGHQNGPCRCVKLSADNREVL-SSGADSKVVLW--DWRKR 684

Query: 293 ATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYF 350
           A  R+ +  F++I     S   +++V   D  G   + V + +  +  + +      +  
Sbjct: 685 APLRIYSGHFVSIGCCDISAQGNRVV-SGDNHG--MICVWEKDSGNSVQTLPLAHSKAVL 741

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFS 407
               S  G  IA     G    + +   D   E + +  +    P   ++SP G  L  +
Sbjct: 742 SVSISADGSTIASV---GADDKVSIWNVDIGIELVSLTAAMESHPLYCSFSPDGNKLAVT 798

Query: 408 RKKDG------DTGSKLYSI 421
                        G + Y I
Sbjct: 799 ESNGNVMVWNVAAGCQWYMI 818



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 107/307 (34%), Gaps = 46/307 (14%)

Query: 127 EFRLWDVKDRKQI-------IGKKFFSSPASWR----------KIAHTISDDIYQSITGE 169
              + DV  + +I       + ++   +P   R          ++  T S +   ++TG 
Sbjct: 130 NLVVVDVMSQNKISVYCHEGLVRQAVFTPNGDRIVSSGNDNKLQVWDTFSLENLVTMTGH 189

Query: 170 KGDFNSRIL-FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           +G      +   +  VVSG    ++ +   +         ++D+ +   +FS + QK+  
Sbjct: 190 EGSVLCCAVNEAATRVVSGGEDCAVRLWSLEDGKQLLAFQAQDEPIKTVQFSSSGQKILS 249

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                    RVY+     +     +  +   I A   S++  +  +    +  + ++ V+
Sbjct: 250 CDVTG----RVYVWSMHAEFLTNLMRRYADNISAVTMSND-MKLCLVGCNNGRVMLWDVE 304

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGSDQKRIS 342
            + +  E  T+     + A+         F S R+         ++ ++ ++   Q    
Sbjct: 305 RRESMWEY-THHTGR-VEAA--------AFNSMRDMCATAGADGRIVLLFADSGKQANSF 354

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER----LLVEDSNLQAPTWS 398
              E       +SP  + IA     G    + + +  GS  +    L    + +    WS
Sbjct: 355 LGAEEPMMTVQFSPDDERIAGCAADG---KLYLYQTAGSSRKPKAVLRSNVARILNHVWS 411

Query: 399 PSGRSLI 405
           P+ + + 
Sbjct: 412 PNSKLVA 418


>gi|303290965|ref|XP_003064769.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226453795|gb|EEH51103.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1221

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 48/149 (32%), Gaps = 21/149 (14%)

Query: 269 GKRALISVQKDEAMDIYSVDLQ-SNATERLTNTLFINISASYS----------PDSSQIV 317
           G   L   + D    IY V         R+T+                     PD + + 
Sbjct: 22  GDTLLFVCEDD----IYGVHATLGGRAHRVTDAPGPVRRPVIRRVETKTNSHCPDGALVA 77

Query: 318 FE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF----A 372
           F  S+ +G E++YV+   G   +R+++          WS  G+++ F   +   F     
Sbjct: 78  FTVSEPDGHEEIYVVSVEGGRMRRLTRAGADFARVATWSEDGEVVYFVTSASRAFPDDDT 137

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           +  +   G     +        P  +  G
Sbjct: 138 LWRVPSRGGAPEKMTLGPFRPTPA-ATDG 165



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 51/166 (30%), Gaps = 25/166 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERL--------TNT-----------LFINISAS 308
           +GKR           DI           R+        T             L   IS +
Sbjct: 360 DGKRLAFVSDATGEDDIEIHREDGKKPRRVHVIHTGPHTTAFALRMGLPPALLGRPISLA 419

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKF- 366
            SP++  +   + R     L ++  +    +     +++       WSP G  +A+TK  
Sbjct: 420 PSPEAPLLAVTNHR---NALLIVDVDAGTCRTADVSEEQGGITHVAWSPCGCWVAYTKRV 476

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
             E   I ++       R           P W P+G  L F   ++
Sbjct: 477 DSETTLIRILDARTGVTRDATTPVLGDCNPGWDPAGDFLYFLSSRE 522



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 32/168 (19%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-------------- 352
           ASY  D  ++ F SD  G++ + + + +G   +R+       +                 
Sbjct: 355 ASYLWDGKRLAFVSDATGEDDIEIHREDGKKPRRVHVIHTGPHTTAFALRMGLPPALLGR 414

Query: 353 ----VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLI 405
                 SP+  L+A T       A+ ++  D    R      E   +    WSP G  + 
Sbjct: 415 PISLAPSPEAPLLAVTNHRN---ALLIVDVDAGTCRTADVSEEQGGITHVAWSPCGCWVA 471

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYASDPQWVGFM 446
           ++++ D +T   +  +D          T       P +     ++ F+
Sbjct: 472 YTKRVDSETTL-IRILDARTGVTRDATTPVLGDCNPGWDPAGDFLYFL 518



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 26/72 (36%), Gaps = 1/72 (1%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSP 311
           +   +  I    +S  G     + + D    +  + D ++  T   T  +  + +  + P
Sbjct: 451 VSEEQGGITHVAWSPCGCWVAYTKRVDSETTLIRILDARTGVTRDATTPVLGDCNPGWDP 510

Query: 312 DSSQIVFESDRE 323
               + F S RE
Sbjct: 511 AGDFLYFLSSRE 522



 Score = 43.9 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 31/95 (32%), Gaps = 4/95 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              P+   VA+   + +    +Y++     R  +             +S +G+       
Sbjct: 68  SHCPDGALVAFTVSEPDGHEEIYVVSVEGGRMRRLTRAGADFARVATWSEDGEVVYFVTS 127

Query: 278 KD----EAMDIYSVDLQSNATERLTNTLFINISAS 308
                 +   ++ V  +  A E++T   F    A+
Sbjct: 128 ASRAFPDDDTLWRVPSRGGAPEKMTLGPFRPTPAA 162



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 12/120 (10%)

Query: 155 AHTISDD-------IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           AH ++D        + + +  +          V+ +V        + V+  +G  +R LT
Sbjct: 44  AHRVTDAPGPVRRPVIRRVETKTNSHCPDGALVAFTVSEPDGHEEIYVVSVEGGRMRRLT 103

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +         +S + + V + T       R +  D  + R P R G    M L P F  
Sbjct: 104 RAGADFARVATWSEDGEVVYFVT----SASRAFPDDDTLWRVPSRGGAPEKMTLGP-FRP 158



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 65/195 (33%), Gaps = 37/195 (18%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------YDDEDILRVYLMDT- 244
            DG  + Y    R ++        + +++A+ +             D +   RV+++ T 
Sbjct: 339 WDGPALSYPFAPRARLASYLW---DGKRLAFVSDATGEDDIEIHREDGKKPRRVHVIHTG 395

Query: 245 --------RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
                   R+   P  +G  R + LAP  S       ++  ++    +  VD+ +     
Sbjct: 396 PHTTAFALRMGLPPALLG--RPISLAP--SPEAPLLAVTNHRN---ALLIVDVDAGTCR- 447

Query: 297 LTNTLFIN----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            T  +          ++SP    + +    + +  L  +    +   R +        +P
Sbjct: 448 -TADVSEEQGGITHVAWSPCGCWVAYTKRVDSETTLIRILDARTGVTRDATTPVLGDCNP 506

Query: 353 VWSPQGDLIAFTKFS 367
            W P GD + F    
Sbjct: 507 GWDPAGDFLYFLSSR 521


>gi|281417464|ref|ZP_06248484.1| copper amine oxidase domain protein [Clostridium thermocellum JW20]
 gi|281408866|gb|EFB39124.1| copper amine oxidase domain protein [Clostridium thermocellum JW20]
          Length = 950

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 95/273 (34%), Gaps = 31/273 (11%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            I D +Y ++T   G       +   +  +   +  L  +  DG     ++      +  
Sbjct: 78  KICDGMYDNLTAYDGYIYG---YCRYTKTNNPEETGLFRLKPDGTERVKISDKSMLFVTI 134

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
                +   + Y ++DD        +D   D   +++ ++ +  +      + +      
Sbjct: 135 ----YDG-WIYYTSFDDNFKPYKMKLDGTDD---QKLSDYSASYINV----DNQWVYFQN 182

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +    IY V    +    +++   +    +   D   I F     G   LY M+ +G+
Sbjct: 183 DANGGR-IYKVKHDGSQITEVSDHGNMYTYLNI--DGEWIYF----SGHYFLYKMKVDGT 235

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +   + ++   +            I F+ F      I  +K DG+Q + L +  +  +  
Sbjct: 236 ELTPLFEELINNVNSKD-----SWIYFSVFEEG---IYRIKTDGTQLQKLRDVEDFVS-G 286

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            S +   L +      D+ +++Y + L+G +  
Sbjct: 287 ISLTDEWLYYEVYDVKDSSTRVYRMRLDGSSHQ 319



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 22/139 (15%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I + S  +   + Y M+ +G+D +++S      Y     +     + F   +    
Sbjct: 136 DG-WIYYTSF-DDNFKPYKMKLDGTDDQKLS-----DYSASYINVDNQWVYFQNDANGG- 187

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            I  +K DGSQ   + +  N+   T+    G  + FS          LY + ++G   T 
Sbjct: 188 RIYKVKHDGSQITEVSDHGNMY--TYLNIDGEWIYFSGHY------FLYKMKVDGTELTP 239

Query: 431 ----INTPAYASDPQWVGF 445
               +     + D  W+ F
Sbjct: 240 LFEELINNVNSKD-SWIYF 257


>gi|299139622|ref|ZP_07032796.1| Protein of unknown function DUF2029 [Acidobacterium sp. MP5ACTX8]
 gi|298598550|gb|EFI54714.1| Protein of unknown function DUF2029 [Acidobacterium sp. MP5ACTX8]
          Length = 707

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 56/162 (34%), Gaps = 14/162 (8%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYS---VDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           P  S++ +             +      +  +     LT +      AS+     +  F 
Sbjct: 544 PMLSADAQSLAFVRDDRGRGQLMVRRGFEPAAAGESALTPSSLNVYEASF-RSEKEYAFS 602

Query: 320 SDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK- 377
           +   G+  Q+Y+  +   +      +       P  SP G  +A++ F    + + +   
Sbjct: 603 AVEYGRPPQVYLRDAMHENIPLALGESRY----PAISPDGRWMAYSHFDQGIWNLWLRNQ 658

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             G+ +R+  E  N   P W    ++L++      D G  L+
Sbjct: 659 MTGATQRIADEPCNQIQPGWEDDSKTLLYGT----DCGRNLW 696



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 42/98 (42%), Gaps = 4/98 (4%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++ A++  +     +VYL D   +  P  +G  R     P  S +G+    S       +
Sbjct: 597 KEYAFSAVEYGRPPQVYLRDAMHENIPLALGESRY----PAISPDGRWMAYSHFDQGIWN 652

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           ++  +  + AT+R+ +     I   +  DS  +++ +D
Sbjct: 653 LWLRNQMTGATQRIADEPCNQIQPGWEDDSKTLLYGTD 690



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 50/141 (35%), Gaps = 9/141 (6%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYV---MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +   S D+  + F  D  G+ QL V    +   + +  ++      Y     S      A
Sbjct: 543 NPMLSADAQSLAFVRDDRGRGQLMVRRGFEPAAAGESALTPSSLNVYEASFRS--EKEYA 600

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           F+     +    V  +D   E + +     + P  SP GR + +S    G     L+  +
Sbjct: 601 FSAVEYGRPP-QVYLRDAMHENIPLALGESRYPAISPDGRWMAYSHFDQGIW--NLWLRN 657

Query: 423 -LNGRNETLINTPAYASDPQW 442
            + G  + + + P     P W
Sbjct: 658 QMTGATQRIADEPCNQIQPGW 678



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P  SP+ + +AY+ +D    +    +  ++  A +RI +     + P +  + K  L  
Sbjct: 631 YPAISPDGRWMAYSHFDQG--IWNLWLRNQMTGATQRIADEPCNQIQPGWEDDSKTLLYG 688

Query: 276 VQKDEAMDI 284
                 +  
Sbjct: 689 TDCGRNLWF 697


>gi|332707902|ref|ZP_08427914.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332353329|gb|EGJ32857.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 461

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 82/211 (38%), Gaps = 25/211 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+ +   VA A    E  +R+Y   T+       +      + A   S    + +I+  
Sbjct: 41  AFTADGHSVAVA--GPERPIRIY--STQTGELSAELPMDARSVRAAAVSP--SQPVIATF 94

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +  ++++  D ++N      N   ++     ++SPD  ++    + +G  +L V  ++ 
Sbjct: 95  IEGRVELW--DWETNEQVWSVNLPGVSRLNELTFSPDGERLALAIE-QGPNRLRVWDAST 151

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-----S 390
            D        + +     +SP G L+A             +K  GSQ+  LVE       
Sbjct: 152 GDVLSEISAHDDAVRCVRFSPDGSLLASASRDCS------IKIWGSQDYRLVETLKGHSG 205

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +    ++P GR LI + +   D    L+++
Sbjct: 206 VVDEVAFAPDGRHLISASQ---DRTCVLWNV 233



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 41/100 (41%), Gaps = 5/100 (5%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              N L V D    ++     + D  +   RFSP+   +A A+ D      + +  ++  
Sbjct: 139 QGPNRLRVWDASTGDVLSEISAHDDAVRCVRFSPDGSLLASASRD----CSIKIWGSQDY 194

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           R  + +     ++    F+ +G+   IS  +D    +++V
Sbjct: 195 RLVETLKGHSGVVDEVAFAPDGRHL-ISASQDRTCVLWNV 233


>gi|73668995|ref|YP_305010.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
 gi|72396157|gb|AAZ70430.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
          Length = 679

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 85/234 (36%), Gaps = 37/234 (15%)

Query: 223 QQKVAYATYDDED----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
             ++ +  + + +       +Y+ +    +  +   +      +P  S  G R +    +
Sbjct: 58  GDRIVWEDWRNGNQSDGPSNIYMYNISTQKETQITTS--GSATSP--SIYGNRIIWLDGR 113

Query: 279 DEAM--------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---EGKEQ 327
           +           D+Y  DL ++   R+TN+       +Y     +I    +R    G   
Sbjct: 114 NGNSQNDTEGGHDVYMYDLSTHKETRITNSTIPEDGFAY---ELRIAISGNRILYGGTYN 170

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIA-FTKFSGEKFAIGVMKKDGSQER 384
             +   +       +Q K      P+ +P   G++I   +   G   ++ +     ++E 
Sbjct: 171 YCIYDIS-------TQKKTYLIDVPIINPAFFGNIIVGVSDIDGRPSSLTMYDLSTNKET 223

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKK---DGDTGSKLYSIDLNGRNETLINTPA 435
           L+    +  +P        ++++  +   DGD  SK+Y  DL+ + ET I    
Sbjct: 224 LITNRDSAFSPDI--DNNIIVWADWRMGDDGDYHSKIYMYDLSTKKETQIANNG 275



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 17/107 (15%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           ++  I+    A       S  GD I +        S     I +      +E  +    +
Sbjct: 41  NETPITTSGSA----CCPSIYGDRIVWEDWRNGNQSDGPSNIYMYNISTQKETQITTSGS 96

Query: 392 LQAPTWSPSGRSLIFSRKKDGDT------GSKLYSIDLNGRNETLIN 432
             +P+    G  +I+   ++G++      G  +Y  DL+   ET I 
Sbjct: 97  ATSPSI--YGNRIIWLDGRNGNSQNDTEGGHDVYMYDLSTHKETRIT 141


>gi|260806987|ref|XP_002598365.1| hypothetical protein BRAFLDRAFT_276588 [Branchiostoma floridae]
 gi|229283637|gb|EEN54377.1| hypothetical protein BRAFLDRAFT_276588 [Branchiostoma floridae]
          Length = 1238

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 91/287 (31%), Gaps = 33/287 (11%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G++     +  R   H   +D +  I    G        V +  +S   +N  C     G
Sbjct: 536 GQQLRDFESFLRTNLHRFFEDPFPDIIQL-GLNQYSKSEVYQQALSRATQNDSCYFVWSG 594

Query: 201 ANI-----RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            +      +         +   +FSP+  +VA    D      + + D    +    +  
Sbjct: 595 KDTVKDPTQLTVKVHSGGVHFAKFSPDGNRVASCGED----CSIKVWDAHTGQVQLTLEG 650

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-------ERLTNTLFINISAS 308
            R ++    FS +G   + S   D  + ++  +  +          +R+T       + S
Sbjct: 651 HRDVVYCCGFSPDGATIV-SCAADRLIHVW--NAANGKLMHTFHAFKRVTPCGTPTRTPS 707

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +  D +++V  S   G+  + ++ S    +         S      S  G L+      G
Sbjct: 708 F--DGTKLVCCS---GEGLVKILDSISGAELHTFTAHTDSVRCCDISTDGSLVVSASTDG 762

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKD 411
                 V+    S +++     + ++     ++ P    +  S    
Sbjct: 763 T----AVVWDTKSAKQITTYSGHNRSALTACSFKPESHVVASSADHQ 805



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 71/189 (37%), Gaps = 13/189 (6%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+   +A           ++L D                +    FS+NGK+ L S  +
Sbjct: 833  FSPDGSLIA----GGLSNFSIHLWDAESMECVAMHYGHTMWVYCVAFSANGKQLL-SSSE 887

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            DE + ++  D++    +R+ + + +      + D+   V  +  +  + L VM+ N ++ 
Sbjct: 888  DEKVILW--DVEG--AKRI-DYMGLKRDFDVNFDADPFVIIA-PDNNDTLRVMKGNQAEV 941

Query: 339  KRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               S    A          P GD +A+    G    +           L+  +  ++  +
Sbjct: 942  VHQSDVSFAKSRIRACCICPSGDKVAYGCEDGVVKLLHFTPTGVKSRELVGHNEAVRCCS 1001

Query: 397  WSPSGRSLI 405
            +S  GR LI
Sbjct: 1002 FSRDGRVLI 1010


>gi|322435784|ref|YP_004217996.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX9]
 gi|321163511|gb|ADW69216.1| transcriptional regulator, CadC [Acidobacterium sp. MP5ACTX9]
          Length = 756

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 78/224 (34%), Gaps = 19/224 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   VA++   +   + ++         P R     S I    +  +GK+ L+S  
Sbjct: 228 AVSPDGNSVAFS---NRAGVSIHTFGGTDHLLPSRPFFQVSRI---SWFPDGKQLLLSGT 281

Query: 278 KDEAMDIYSVD--LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +      +   L         +   +   A+ SP    + +   R    +L+V  + G
Sbjct: 282 DTQTRRHQVLGAILWEGYLRPFADDADL---ATVSPTGDSVAYT--RHNNTELWVADAGG 336

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            + +++  D   S+   +WS  GD +   + +           D     +L  +S L  P
Sbjct: 337 ENPRKLLTDARGSFTYLIWSSTGDHLLADRHTTSPDLDSYESIDARSGAVLTHESGLAFP 396

Query: 396 T--WSPSGRSLIF---SRKKDGDTGSKLYSIDLNGRNETLINTP 434
           +      GR L F     +      ++L  +  + R   L+  P
Sbjct: 397 SGYLLEDGR-LYFPISGSQNPASGKTRLMMVHTDPRTGKLLEKP 439



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 77/456 (16%), Positives = 141/456 (30%), Gaps = 76/456 (16%)

Query: 18  CLLLVLIGGFFPTSIHAFVKVATNSANYSPVSI---AFTKF----VSIDELGGKVSEV-V 69
            +LLV+ GGFF       +++    +  + + +   A   F    V++   G  +S V V
Sbjct: 176 LVLLVIAGGFF------LLRLTRARSATAAMPVTKTASLPFHLRPVTLTAHGETISAVAV 229

Query: 70  SKDLQRSDVFNL---ISQDSFKQKITNPDSIPRFQ----DWNSLGAQVLVTGRVIKEGKD 122
           S D   S  F+    +S  +F        S P FQ     W   G Q+L++G        
Sbjct: 230 SPD-GNSVAFSNRAGVSIHTFGGTDHLLPSRPFFQVSRISWFPDGKQLLLSGT------- 281

Query: 123 RLRVEFRLWDVKDRK-QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                    D + R+ Q++G         W       +DD   +     GD    + +  
Sbjct: 282 ---------DTQTRRHQVLG------AILWEGYLRPFADDADLATVSPTGD---SVAYTR 323

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +         L V D  G N R L            +S     +    +     L  Y 
Sbjct: 324 HNN------TELWVADAGGENPRKLLTDARGSFTYLIWSSTGDHLLADRHTTSPDLDSY- 376

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-------DIYSVDLQSNA- 293
            ++   R+   + +   +     +     R    +   +          +   D ++   
Sbjct: 377 -ESIDARSGAVLTHESGLAFPSGYLLEDGRLYFPISGSQNPASGKTRLMMVHTDPRTGKL 435

Query: 294 ---TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK----RISQDKE 346
               + L        + S S D  +I    D      ++V   +         R    K 
Sbjct: 436 LEKPQELQTFSGYGGALSASTDGKRIALALDYA-TVNVFVADLHLPGPTLDNIRELPHKV 494

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSL 404
              +   W+P G  +         +AI     D  + +L+ +       A T SP GR +
Sbjct: 495 EESYPHAWTPDGKAVLSESSVLGTWAIFKNPLDAPESQLVAKLPTGAAMAQT-SPDGRWI 553

Query: 405 IFSRKKDG-DTGSKLYSIDLNGRNETLINTPAYASD 439
           +F    +     S ++ + + G     +       D
Sbjct: 554 MFLEVSNNVAAPSGIFRVPVAGGEAAQVPVSGQIED 589


>gi|149280342|ref|ZP_01886463.1| dipeptidyl aminopeptidase IV, putative [Pedobacter sp. BAL39]
 gi|149228891|gb|EDM34289.1| dipeptidyl aminopeptidase IV, putative [Pedobacter sp. BAL39]
          Length = 721

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 94/287 (32%), Gaps = 25/287 (8%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           SD +Y S         S+  F S S       N L     D    + +      + +  R
Sbjct: 176 SDIVYASSVHRDEFGISKGTFWSNSG------NQLAFYRMD----QSMVTDYPIVDWTSR 225

Query: 219 FSPNQQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            + N   + Y    D+     + VY   T+     K        +    +S + K   I+
Sbjct: 226 PAKNVN-IKYPMAGDKSHHVTVGVYNAATKTTVYLKTGEPAEQYLTNIAWSPDDKYIFIA 284

Query: 276 VQKDE--AMDIYSVDLQSNA-TERLTNTL-FINISA-----SYSPDSSQIVFESDREGKE 326
           V       M +   D  +    + L        +           D+S+ +++S+R+G  
Sbjct: 285 VVNRGQNHMKLNQYDATTGNFMKTLFEEKDSKYVEPLVPMLFLKNDASRFIWQSNRDGWN 344

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQER 384
            LY+   +G   K++++          ++  GD + +   +       +  +    ++  
Sbjct: 345 HLYLFDLSGKLLKQLTKGNWEVLEVKGFTTNGDQLFYVSTAESPITRNLYSLNIKSAKST 404

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            + +   +     S SG+S+I    K              G+ + L+
Sbjct: 405 RMTKGFAVHNAQVSSSGKSVIDQYSKPDQPRIIQVLEPATGKEKVLL 451


>gi|146303225|ref|YP_001190541.1| peptidase S9 prolyl oligopeptidase [Metallosphaera sedula DSM 5348]
 gi|145701475|gb|ABP94617.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Metallosphaera sedula DSM 5348]
          Length = 536

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 62/150 (41%), Gaps = 15/150 (10%)

Query: 269 GKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           G R  +   +  A    IY VD    A   L +  F N+   +     +  F S+R+ +E
Sbjct: 52  GSRLAVVADQGGAEVRSIYLVD---EAPHPLLSDGFDNMEPVFL-KEDKFYFLSNRD-RE 106

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +   +G    ++S+       D   SP G  +A++    +   + ++     +E ++
Sbjct: 107 TIRLYLYDGGQITKVSK-GNLPVSDVCVSPGGRWVAYSSGIYDN-DLYLLDSKTGEEVVV 164

Query: 387 VEDSNLQAPT----WSPSGRSLIFSRKKDG 412
              ++ Q P+    ++  G SL+F    +G
Sbjct: 165 SYPNSEQYPSSSQCFT--GDSLLFLSNHNG 192



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 78/239 (32%), Gaps = 18/239 (7%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-VYLMDTRIDRAPKR 252
            V+ +D   +  L     QI           ++A         +R +YL+D     AP  
Sbjct: 23  YVILKDSPKVEILGVGEVQIEEPETVHWVGSRLAVVADQGGAEVRSIYLVD----EAPHP 78

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + +     + P F    K   +S +  E + +Y  D       +++           SP 
Sbjct: 79  LLSDGFDNMEPVFLKEDKFYFLSNRDRETIRLYLYD--GGQITKVSKGNLPVSDVCVSPG 136

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              + + S       LY++ S   ++  +S      Y        GD + F         
Sbjct: 137 GRWVAYSSG-IYDNDLYLLDSKTGEEVVVSYPNSEQYPSSSQCFTGDSLLFLSNHNGFLD 195

Query: 373 IGVMKK-DGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +G +   D +   L+    +  +A  W      L+++    G        + ++G+  T
Sbjct: 196 VGKLSLRDHTVSWLVTSKEDKFEALMWR---DRLVYTVDVRGH-----ILLMVDGKPLT 246


>gi|313677495|ref|YP_004055491.1| prolyl oligopeptidase [Marivirga tractuosa DSM 4126]
 gi|312944193|gb|ADR23383.1| secreted prolyl oligopeptidase family protein [Marivirga tractuosa
           DSM 4126]
          Length = 632

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 81/225 (36%), Gaps = 14/225 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS ++ K+   + +   I  +Y + T          N      A  +     R L S  K
Sbjct: 51  FSHDESKLL-VSSNATGIYNLYALHTDGTLVDTLSNNTEESWFANSYFPKDDRILFSADK 109

Query: 279 DEA--MDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESD-REGKE-QLYVMQS 333
                  IY +D   N  + LT       S A +S D     + S+ R+ K   +Y M  
Sbjct: 110 GGNEISHIYLLDEDGNVID-LTPEENEKASFAGWSKDLKSFEYISNKRDPKFFDIYEMDI 168

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVEDSNL 392
              + + I  +          S     +A +K        + +++ +  ++  +  ++  
Sbjct: 169 ENFESEMI-FENNTGGNPSGISDDKKYVAISKPITTSINELIIVEVESGEQTKISPENPT 227

Query: 393 QAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT 433
            + +   +S   + L ++   DG   + L   DL +G +E +  T
Sbjct: 228 ASYSAQEFSADSKYLYYTTN-DGSEFTYLSKYDLESGESEKVYET 271



 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 7/156 (4%)

Query: 293 ATERLTNTLFIN----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
              + T   F N        +S D S+++  S+  G   LY + ++G+    +S + E S
Sbjct: 31  KITQYTIEEFYNNINYSGGYFSHDESKLLVSSNATGIYNLYALHTDGTLVDTLSNNTEES 90

Query: 349 YFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLI 405
           +F   + P+ D I F+   G      I ++ +DG+   L  E++   +   WS   +S  
Sbjct: 91  WFANSYFPKDDRILFSADKGGNEISHIYLLDEDGNVIDLTPEENEKASFAGWSKDLKSFE 150

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +   K       +Y +D+      +I       +P 
Sbjct: 151 YISNKRDPKFFDIYEMDIENFESEMIFENNTGGNPS 186


>gi|32475552|ref|NP_868546.1| hypothetical protein RB8792 [Rhodopirellula baltica SH 1]
 gi|32446094|emb|CAD75923.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 451

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 49/142 (34%), Gaps = 19/142 (13%)

Query: 280 EAMDIYSVDLQSNATERLTN-------TLFINIS--ASYSPDSSQIVF-ESDREGKEQLY 329
                           RLT         L  ++       PD S+IVF   D  G  QL+
Sbjct: 291 GTAHSRPAPPAGTVQRRLTRTTDRAYPGLATDVRHWPRSKPDGSKIVFLMRDDNGVVQLW 350

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE- 388
            +  NG   +++S   E         P GDL+A    +    +I  +  D     ++ E 
Sbjct: 351 SISPNGGSPQQVSFGSETVGSAFSIHPSGDLVACVIGN----SICEVSLDDGSVEIVAEQ 406

Query: 389 -DSNLQAP---TWSPSGRSLIF 406
            D  +  P    +SP G  + F
Sbjct: 407 NDRLVCLPFAVVYSPDGNEIAF 428



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 50/136 (36%), Gaps = 26/136 (19%)

Query: 200 GANIRYLTPSRDQ--------ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           G   R LT + D+        +   PR  P+  K+ +   DD  +++++ +        +
Sbjct: 302 GTVQRRLTRTTDRAYPGLATDVRHWPRSKPDGSKIVFLMRDDNGVVQLWSISPNGGSPQQ 361

Query: 252 RIGNFRSMILAPRFS--SNGKRALISVQKDEAMDIYSVDLQSNATE-------RLTNTLF 302
              +F S  +   FS   +G      +       I  V L   + E       RL    F
Sbjct: 362 V--SFGSETVGSAFSIHPSGDLVACVI----GNSICEVSLDDGSVEIVAEQNDRLVCLPF 415

Query: 303 INISASYSPDSSQIVF 318
             +   YSPD ++I F
Sbjct: 416 AVV---YSPDGNEIAF 428


>gi|110807618|ref|YP_691138.1| hypothetical protein SFV_3822 [Shigella flexneri 5 str. 8401]
 gi|110617166|gb|ABF05833.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|332750680|gb|EGJ81088.1| hypothetical protein SF434370_4056 [Shigella flexneri 4343-70]
 gi|332997427|gb|EGK17043.1| hypothetical protein SFK218_4937 [Shigella flexneri K-218]
          Length = 406

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 256 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 315

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 316 WLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIVCAHAQSGEVEYLTE 371

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 372 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 405



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     K   N   +  A  +  +G+     + 
Sbjct: 294 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVLD 353

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 354 N----RIVCAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 405



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I+  +    
Sbjct: 307 RDDNGIVQLWLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIVCAHAQSG 364

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 365 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 393


>gi|307152332|ref|YP_003887716.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306982560|gb|ADN14441.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 380

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 61/190 (32%), Gaps = 16/190 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P+ + +         +  + +      R   R+      + A   S +G   L S  
Sbjct: 174 RVTPDGEILV-----SGGLDGIRIWTLNPRRPLYRLTGLGHPVYALAISPDG-VILASGS 227

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  +  +++  +                  ++PD  +++  S     + + V       
Sbjct: 228 LDGEVKFWNI-KEGKLLSTFYPHQATITGLVFTPDGKKLITSSQ---DKTIKVWDLATGQ 283

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNL-QAP 395
                            +P G ++A    SG    I +   +   Q   ++E+ +  Q+ 
Sbjct: 284 LIYTLAGHTGRIRAIALNPDGKILA----SGGNDGIRIWNIETGEQYNQIIENYDWVQSL 339

Query: 396 TWSPSGRSLI 405
            +SP G+ L 
Sbjct: 340 AFSPDGQFLA 349



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 59/176 (33%), Gaps = 12/176 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + +   +     Y        ++    SP+   +A  + D E    V   + +  +    
Sbjct: 190 IRIWTLNPRRPLYRLTGLGHPVYALAISPDGVILASGSLDGE----VKFWNIKEGKLLST 245

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSP 311
               ++ I    F+ +GK+  I+  +D+ + ++  DL +      L        + + +P
Sbjct: 246 FYPHQATITGLVFTPDGKKL-ITSSQDKTIKVW--DLATGQLIYTLAGHTGRIRAIALNP 302

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           D   +       G + + +      +Q     +         +SP G  +A   F 
Sbjct: 303 DGKILA----SGGNDGIRIWNIETGEQYNQIIENYDWVQSLAFSPDGQFLASGSFD 354



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 70/196 (35%), Gaps = 19/196 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+ Q +       +  LRV+    +  +    I   R+ + A   + +G   LIS  +
Sbjct: 89  FTPDGQHLITGGSFTDPQLRVWSF--KSGQKLSDIKAQRTGVQALAINPSGT-ILISGGQ 145

Query: 279 DEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D  ++++  D +S              ++   +PD   +V      G + + +   N   
Sbjct: 146 DGGINMW--DWRSGKYLGIWLEHQGQVMALRVTPDGEILV----SGGLDGIRIWTLNPRR 199

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQ 393
                       +    SP G ++A     GE     +      + +LL       + + 
Sbjct: 200 PLYRLTGLGHPVYALAISPDGVILASGSLDGEVKFWNI-----KEGKLLSTFYPHQATIT 254

Query: 394 APTWSPSGRSLIFSRK 409
              ++P G+ LI S +
Sbjct: 255 GLVFTPDGKKLITSSQ 270


>gi|198425806|ref|XP_002127700.1| PREDICTED: similar to WD repeat domain 5 [Ciona intestinalis]
          Length = 360

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 77/206 (37%), Gaps = 15/206 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +++      + +   +FSP+ Q +A ++ D      + +      +  K I   +  I  
Sbjct: 63  LKFTMAGHTKAVSSVKFSPDGQWLASSSADK----LIKIWGAYDGKYEKTISGHKLGISD 118

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESD 321
             +S++    L S   D+ + I+  D+ +    + L          +++P S+ IV  S 
Sbjct: 119 IAWSTD-SHLLCSASDDKTLKIW--DVATGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSF 175

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               E + +         +             ++  G LI  + + G    I      G 
Sbjct: 176 ---DESVRIWDVRTGKCLKTLPAHSDPVSSVHFNRDGALIVSSSYDG-LCRIW-DTASGQ 230

Query: 382 QERLLVEDSN--LQAPTWSPSGRSLI 405
             + L++D N  +    +SP+G+ ++
Sbjct: 231 CLKTLIDDDNPPVSFVKFSPNGKYIL 256


>gi|160899947|ref|YP_001565529.1| APHP domain-containing protein [Delftia acidovorans SPH-1]
 gi|160365531|gb|ABX37144.1| APHP domain protein [Delftia acidovorans SPH-1]
          Length = 5743

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 79/229 (34%), Gaps = 22/229 (9%)

Query: 217  PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            P +SP+  ++            V+L+                 +    +  +GKR L   
Sbjct: 4265 PVWSPDASQL----LVQGAGGTVHLVQVADGSVSDP--GLDGSVRMLDWHPDGKRWL--G 4316

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              +   ++  V + + A+  +        + + +PD   +      +G + + +   +G 
Sbjct: 4317 MTNGGRELVEVPMGAGASRTVARASRWFSNFAIAPDGQHVAAV---DGGQLVLLSLPDGH 4373

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLV-EDSNLQ 393
               + SQ     Y    WS  G  + F    G+   + + + +   +   ++   +  + 
Sbjct: 4374 VLAQ-SQPGADDYEPLQWSSDGQSVYFLARQGDAQAYQVHLQQVGQAAPVVVTAHEEGVD 4432

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
              + SP+   L F R      G++L+ +D  G     I+   +     W
Sbjct: 4433 HFSLSPT-DVLAFVR------GTQLHIVDAAGAAPRSIDMGIHPESMAW 4474



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 78/227 (34%), Gaps = 22/227 (9%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            V   DG+      P  D  +    + P+ ++    T    +++ V +         +   
Sbjct: 4286 VQVADGS---VSDPGLDGSVRMLDWHPDGKRWLGMTNGGRELVEVPMGAGASRTVARASR 4342

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDS 313
             F +  +AP    +G+         +   +  + L        +     +     +S D 
Sbjct: 4343 WFSNFAIAP----DGQHVAAV----DGGQLVLLSLPDGHVLAQSQPGADDYEPLQWSSDG 4394

Query: 314  SQIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              + F + R+G  Q Y +     G     +    E        SP  D++AF + +    
Sbjct: 4395 QSVYFLA-RQGDAQAYQVHLQQVGQAAPVVVTAHEEGVDHFSLSPT-DVLAFVRGT---- 4448

Query: 372  AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             + ++   G+  R +    + ++  W+ SG  L+F    DG T   L
Sbjct: 4449 QLHIVDAAGAAPRSIDMGIHPESMAWARSG--LLFVTDSDGVTSLAL 4493



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 67/194 (34%), Gaps = 21/194 (10%)

Query: 235  DILRVYLMDTRIDRAPKRIGNFR----SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D L ++ +   +D +      ++     M   P +S +  + L+   +     ++ V + 
Sbjct: 4233 DGLSIFHVQPLLDGSATPATLYKLPGVGMGGIPVWSPDASQLLV---QGAGGTVHLVQVA 4289

Query: 291  SNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
              +     +   ++ S     + PD  +  +     G  +L  +       + +++    
Sbjct: 4290 DGSV----SDPGLDGSVRMLDWHPDGKR--WLGMTNGGRELVEVPMGAGASRTVARASRW 4343

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIF 406
             + +   +P G  +A          + +   DG         ++   P  WS  G+S+ F
Sbjct: 4344 -FSNFAIAPDGQHVAAV---DGGQLVLLSLPDGHVLAQSQPGADDYEPLQWSSDGQSVYF 4399

Query: 407  SRKKDGDTGSKLYS 420
              ++      +++ 
Sbjct: 4400 LARQGDAQAYQVHL 4413



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 65/166 (39%), Gaps = 17/166 (10%)

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            +L+ +  +   +++ + +++      S +G    + +      ++ ++ + + A   L  
Sbjct: 1413 HLVASGGEGEGRKLISTKALRSLISLSHDGSEVFVHL---GDGNLGAIHIGTGAVRALGA 1469

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                ++    SPD ++++ E+   G   + ++       + +  D         WSP G 
Sbjct: 1470 ESVYDV--RLSPDRTRLLAEASAIGTLLVNLVN---GHVRALPNDHRYY-----WSPDGR 1519

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            L+        +  + V+  DG++ R +  ++ +    WS     L 
Sbjct: 1520 LVV----GQTQTELLVLNADGNELRQVSLENVVGQEAWSEDSAELY 1561



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 25/184 (13%)

Query: 267  SNGKRALISVQKDEAMDIYSVDLQS-------NATERLTNTLFINISASYSPDSSQIVFE 319
             +G R+ ++ ++   +  Y+ DL             +L +T  +    S S D S+ VF 
Sbjct: 1389 PSGWRSFVADEQGTRLVAYNSDLDHLVASGGEGEGRKLISTKALRSLISLSHDGSE-VFV 1447

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                G   L  +       + +      S +D   SP    +     +     + ++   
Sbjct: 1448 --HLGDGNLGAIHIGTGAVRAL---GAESVYDVRLSPDRTRLLAEASAIGTLLVNLVN-- 1500

Query: 380  GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                R L  D       WSP GR ++      G T ++L  ++ +G     ++       
Sbjct: 1501 -GHVRALPNDHRYY---WSPDGRLVV------GQTQTELLVLNADGNELRQVSLENVVGQ 1550

Query: 440  PQWV 443
              W 
Sbjct: 1551 EAWS 1554


>gi|125973262|ref|YP_001037172.1| copper amine oxidase-like protein [Clostridium thermocellum ATCC
           27405]
 gi|256003741|ref|ZP_05428729.1| copper amine oxidase domain protein [Clostridium thermocellum DSM
           2360]
 gi|125713487|gb|ABN51979.1| copper amine oxidase-like protein [Clostridium thermocellum ATCC
           27405]
 gi|255992302|gb|EEU02396.1| copper amine oxidase domain protein [Clostridium thermocellum DSM
           2360]
 gi|316940506|gb|ADU74540.1| copper amine oxidase-like domain-containing protein [Clostridium
           thermocellum DSM 1313]
          Length = 950

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/273 (14%), Positives = 95/273 (34%), Gaps = 31/273 (11%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            I D +Y ++T   G       +   +  +   +  L  +  DG     ++      +  
Sbjct: 78  KICDGMYDNLTAYDGYIYG---YCRYTKTNNPEETGLFRLKPDGTERVKISDKSMLFVTI 134

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
                +   + Y ++DD        +D   D   +++ ++ +  +      + +      
Sbjct: 135 ----YDG-WIYYTSFDDNFKPYKMKLDATDD---QKLSDYSASYINV----DNQWVYFQN 182

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +    IY V    +    +++   +    +   D   I F     G   LY M+ +G+
Sbjct: 183 DANGGR-IYKVKHDGSQITEVSDHGNMYTYLNI--DGEWIYF----SGHYFLYKMKVDGT 235

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +   + ++   +            I F+ F      I  +K DG+Q + L +  +  +  
Sbjct: 236 ELTPLFEELINNVNSKD-----SWIYFSVFEEG---IYRIKTDGTQLQKLRDVEDFVS-G 286

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            S +   L +      D+ +++Y + L+G +  
Sbjct: 287 ISLTDEWLYYEVYDVKDSSTRVYRMRLDGSSHQ 319



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 51/139 (36%), Gaps = 22/139 (15%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I + S  +   + Y M+ + +D +++S      Y     +     + F   +    
Sbjct: 136 DG-WIYYTSF-DDNFKPYKMKLDATDDQKLS-----DYSASYINVDNQWVYFQNDANGG- 187

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            I  +K DGSQ   + +  N+   T+    G  + FS          LY + ++G   T 
Sbjct: 188 RIYKVKHDGSQITEVSDHGNMY--TYLNIDGEWIYFSGHY------FLYKMKVDGTELTP 239

Query: 431 ----INTPAYASDPQWVGF 445
               +     + D  W+ F
Sbjct: 240 LFEELINNVNSKD-SWIYF 257


>gi|325093959|gb|EGC47269.1| secreted dipeptidyl peptidase DppV [Ajellomyces capsulatus H88]
          Length = 721

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 90/308 (29%), Gaps = 68/308 (22%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           GK +    A  R  +  I D IY   T     + +       S             D D 
Sbjct: 149 GKLYNKEQAEKRYSSARIYDSIY---TRHWDTWLTPEFNAIFSGTLKKGYGHAYTFDGDL 205

Query: 201 ANIRYLTPSRDQILFEPRF--------SPNQQKVAYAT---------------YDDEDIL 237
            N+  ++P +      P F        SP+ + VA+ +               +      
Sbjct: 206 HNL--VSPVKHAECPGPPFGGVGDYDLSPDGKTVAFMSKAPELPKANLTTSYIFIVPHDG 263

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQS 291
                     ++   +        +P FS + K+         S + D    +Y   L  
Sbjct: 264 SSVAFPINGPKSGAAVNGIVGASSSPAFSPDSKKIAYLQMEERSYEADRRT-VYVSTLDG 322

Query: 292 NATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +    L +    + S     ++PD   +    +   + +L+ + ++ S          A+
Sbjct: 323 SKIISLASN--WDRSPDALKWAPDGESLYLSVEDRARGRLFTLPADAS----------AN 370

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGR-S 403
           Y    ++  G + AF                     +L   + + +       SP  +  
Sbjct: 371 YVPKNFTDHGIVSAFHFLKDS-------------PSVLTTTTTIWSNAIYTIASPDEKPK 417

Query: 404 LIFSRKKD 411
           ++FS  + 
Sbjct: 418 ILFSANEH 425



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 75/206 (36%), Gaps = 17/206 (8%)

Query: 191 NSLCVMDRDGANIRYLTPSRD---------QILFEPRFSPNQQKVAYATYDDE----DIL 237
           + + ++  DG+++ +                    P FSP+ +K+AY   ++     D  
Sbjct: 254 SYIFIVPHDGSSVAFPINGPKSGAAVNGIVGASSSPAFSPDSKKIAYLQMEERSYEADRR 313

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---T 294
            VY+      +      N+     A +++ +G+   +SV+      ++++   ++A    
Sbjct: 314 TVYVSTLDGSKIISLASNWDRSPDALKWAPDGESLYLSVEDRARGRLFTLPADASANYVP 373

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +  T+   I  +  +  DS  ++  +       +Y + S     K +    E        
Sbjct: 374 KNFTDH-GIVSAFHFLKDSPSVLTTTTTIWSNAIYTIASPDEKPKILFSANEHDAELAGL 432

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDG 380
            P+     +   +  K    ++K +G
Sbjct: 433 GPEDIEEFYFDGNWTKIHSWIVKPEG 458



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 25/138 (18%)

Query: 310 SPDSSQIVFESDREGKEQ-------LYVMQSNGSDQKRISQDKE---------ASYFDPV 353
           SPD   + F S      +       ++++  +GS         +          +   P 
Sbjct: 231 SPDGKTVAFMSKAPELPKANLTTSYIFIVPHDGSSVAFPINGPKSGAAVNGIVGASSSPA 290

Query: 354 WSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIF 406
           +SP    IA+ +     +      + V   DGS+   L  + +       W+P G SL  
Sbjct: 291 FSPDSKKIAYLQMEERSYEADRRTVYVSTLDGSKIISLASNWDRSPDALKWAPDGESLYL 350

Query: 407 SRKKDGDTGSKLYSIDLN 424
           S   +     +L+++  +
Sbjct: 351 S--VEDRARGRLFTLPAD 366



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 39/124 (31%), Gaps = 25/124 (20%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVED-------- 389
                 D   SP G  +AF   + E          I ++  DGS     +          
Sbjct: 221 PFGGVGDYDLSPDGKTVAFMSKAPELPKANLTTSYIFIVPHDGSSVAFPINGPKSGAAVN 280

Query: 390 ---SNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDP--- 440
                  +P +SP  + + + + ++    +    +Y   L+G     + +  +   P   
Sbjct: 281 GIVGASSSPAFSPDSKKIAYLQMEERSYEADRRTVYVSTLDGSKIISLASN-WDRSPDAL 339

Query: 441 QWVG 444
           +W  
Sbjct: 340 KWAP 343


>gi|323457086|gb|EGB12952.1| hypothetical protein AURANDRAFT_18466 [Aureococcus anophagefferens]
          Length = 243

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 82/237 (34%), Gaps = 25/237 (10%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VV+    N   V D    ++     S    +    +S + ++V  A+ D     +V+   
Sbjct: 3   VVTASWANEALVWDVATGDVLVALRSHGAAVNGAAWSRDGRRVVTASED--RTAKVWDAA 60

Query: 244 TRIDRAPKRIGN---FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTN 299
           T  + A  R  +    R  +     SS+G RA  +   DE   ++  D  + A     + 
Sbjct: 61  TGEELATLRGHDARKHRGDLWGCDVSSDGARAA-TASSDETAKLF--DAATGACLRTFSG 117

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLY--------VMQSNGSDQKRISQDKEASYFD 351
                 + ++SPD S++   S  +G  +++           +  +     +Q        
Sbjct: 118 HGDRVTACAFSPDGSRLA-TSSWDGVGKIWDAATGACLHTLAGHAPPADANQATHGRLES 176

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLI 405
             ++P G  +A T +        V        RL     + +      ++P G  L+
Sbjct: 177 VAFAPDGSRVATTSWDRTA---RVWDAATG-ARLETLAGHAETVYCCAFAPDGARLV 229



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 75/265 (28%), Gaps = 52/265 (19%)

Query: 130 LWDVKDRKQIIGKKFFSSP---ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +WDV     ++  +   +    A+W +    +                   L       +
Sbjct: 14  VWDVATGDVLVALRSHGAAVNGAAWSRDGRRVVTASEDRTAKVWDAATGEELATLRGHDA 73

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              +  L   D                      S +  + A A+ D+       L D   
Sbjct: 74  RKHRGDLWGCDV---------------------SSDGARAATASSDE----TAKLFDAAT 108

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA------------- 293
               +        + A  FS +G R   +   D    I+  D  + A             
Sbjct: 109 GACLRTFSGHGDRVTACAFSPDGSRLA-TSSWDGVGKIW--DAATGACLHTLAGHAPPAD 165

Query: 294 TERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             + T+    ++  +++PD S++   S DR  +    V  +    +         + +  
Sbjct: 166 ANQATHGRLESV--AFAPDGSRVATTSWDRTAR----VWDAATGARLETLAGHAETVYCC 219

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMK 377
            ++P G  +  T        + V++
Sbjct: 220 AFAPDGARLV-TGAEDRTARVWVLR 243



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 67/226 (29%), Gaps = 38/226 (16%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D         + +  + +    +S +G+R +++  +D    ++  D  +     L   
Sbjct: 14  VWDVATGDVLVALRSHGAAVNGAAWSRDGRR-VVTASEDRTAKVW--DAATGEE--LATL 68

Query: 301 LFIN--------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              +             S D ++    S     E   +  +      R            
Sbjct: 69  RGHDARKHRGDLWGCDVSSDGARAATASS---DETAKLFDAATGACLRTFSGHGDRVTAC 125

Query: 353 VWSPQGDLIAFTKFSGEKFAIG-------VMKKDG----SQERLLVEDSNLQAPTWSPSG 401
            +SP G  +A + + G    I        +    G    +          L++  ++P G
Sbjct: 126 AFSPDGSRLATSSWDGVG-KIWDAATGACLHTLAGHAPPADANQATH-GRLESVAFAPDG 183

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP------AYASDPQ 441
             +  +     D  ++++      R ETL          A+A D  
Sbjct: 184 SRVATTSW---DRTARVWDAATGARLETLAGHAETVYCCAFAPDGA 226


>gi|190893468|ref|YP_001980010.1| hypothetical protein RHECIAT_CH0003895 [Rhizobium etli CIAT 652]
 gi|190698747|gb|ACE92832.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
 gi|327189539|gb|EGE56692.1| hypothetical protein RHECNPAF_58004 [Rhizobium etli CNPAF512]
          Length = 329

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 88/263 (33%), Gaps = 24/263 (9%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            +D     +      + S++    +  V+     S  V   DG    +     ++ +   
Sbjct: 73  AADGSVSELATAPRKWISQVAAGPQGAVAYSYGKSSLVRLADGTTKEFP---EERTVEGI 129

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P   ++A A Y+      V L        P  +  ++       FS +G   + S+Q
Sbjct: 130 AFAPKGLRIAAARYNG-----VSLHWVGTSAKPVDL-EWKGAHTGVTFSPDGNFLVTSMQ 183

Query: 278 KDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ A+  + +D +  A  R   +T       S S+S     +       G     V    
Sbjct: 184 EN-ALHGWKLDSKPGAEARHMRMTGYPAKVKSLSWSVKGKWLA----SSGAPAAIVWPFQ 238

Query: 335 GSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           G D         +            + P  D++A     G   A+ +     +  R   +
Sbjct: 239 GKDGPMGKAPLELGTRANIMATSVRFHPLEDILAIGFIDGMILAVRIADSKEALLRRPGK 298

Query: 389 DSNLQAPTWSPSGRSLIFSRKKD 411
              + A +WS +G+ L F+ +  
Sbjct: 299 -GAITAMSWSANGKLLAFASEAG 320



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 82/248 (33%), Gaps = 29/248 (11%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V    Q     +    +S  ++A   + +  +  T E   F  + L ++ +  +G+    
Sbjct: 92  VAAGPQ-GAVAYSYGKSSLVRLADGTTKEFPEERTVEGIAFAPKGLRIAAARYNGVS--- 147

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK- 251
              +   G + + +            FSP+   +   T   E+ L  + +D++     + 
Sbjct: 148 ---LHWVGTSAKPVDLEWKGAHTGVTFSPDGNFL--VTSMQENALHGWKLDSKPGAEARH 202

Query: 252 -RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-------TERLTNTLFI 303
            R+  + + + +  +S  GK    S     A        Q           E  T    +
Sbjct: 203 MRMTGYPAKVKSLSWSVKGKWLASS----GAPAAIVWPFQGKDGPMGKAPLELGTRANIM 258

Query: 304 NISASYSPDSSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             S  + P    +   F         +  ++   S +  + +  + +     WS  G L+
Sbjct: 259 ATSVRFHPLEDILAIGFI-----DGMILAVRIADSKEALLRRPGKGAITAMSWSANGKLL 313

Query: 362 AFTKFSGE 369
           AF   +G+
Sbjct: 314 AFASEAGD 321


>gi|115379685|ref|ZP_01466764.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
 gi|310825498|ref|YP_003957856.1| hypothetical protein STAUR_8274 [Stigmatella aurantiaca DW4/3-1]
 gi|115363299|gb|EAU62455.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
 gi|309398570|gb|ADO76029.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 319

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/281 (14%), Positives = 82/281 (29%), Gaps = 30/281 (10%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               +L V+D  G        +    +  P    + +   Y          +  + T   
Sbjct: 46  REDRNLYVVDDRGDPNDPQRLTVGGGVSFPSVDRSGRIAVYVQETSGFNSEIRTVPTAGT 105

Query: 248 RAPKRIGNFRSMI-------LAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTN 299
            +P  +               +P FS +G+  + S      A+ +  V+   +  + LT 
Sbjct: 106 GSPSTVIASGDASCPTCTQFRSPTFSPDGRVIVFSFNDGSGALSLGRVNADGSGFQELTP 165

Query: 300 TLFINIS-ASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WS 355
               +    S+ PD   ++  +  +     QL  +  +      I+ +      +    S
Sbjct: 166 NTSTSFGAPSFFPDGLSVLVPAGLNSGYLNQLKRVTLSNGVIANIADNLNNEVVNRAVVS 225

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVE-----DSNLQAPTW-SPSGRSLIFS 407
           P G  +A          I              L +      +    P W S +   + F 
Sbjct: 226 PDGSQVALDGGPISGSRIFTASLRTPFGPLTRLTDHPGEPRAQDTFPAWVSTN--QIGFL 283

Query: 408 RKKDGDTGSKLYSIDLN---GRNETLINTPAYASDPQWVGF 445
                     +Y I +    G    L+ +   A +P + GF
Sbjct: 284 SNAGNTQ--SIYRITVGAVAGSGTLLVPS---AFEPSYGGF 319



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 59/171 (34%), Gaps = 9/171 (5%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
               F+     +  S   G    SL  ++ DG+  + LTP+       P F P+   V  
Sbjct: 126 RSPTFSPDGRVIVFSFNDGSGALSLGRVNADGSGFQELTPNTSTSFGAPSFFPDGLSVLV 185

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDEAMDIYS 286
               +   L      T  +     I +  +  +      S +G +  +         I++
Sbjct: 186 PAGLNSGYLNQLKRVTLSNGVIANIADNLNNEVVNRAVVSPDGSQVALDGGPISGSRIFT 245

Query: 287 VDLQS--NATERLTNTLFI----NISASYSPDSSQIVFESDREGKEQLYVM 331
             L++      RLT+        +   ++   ++QI F S+    + +Y +
Sbjct: 246 ASLRTPFGPLTRLTDHPGEPRAQDTFPAWV-STNQIGFLSNAGNTQSIYRI 295



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 15/133 (11%)

Query: 327 QLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKK--DGS 381
            LYV+   G  +D +R++     S+     S  G +  + +  SG    I  +     GS
Sbjct: 50  NLYVVDDRGDPNDPQRLTVGGGVSFPSVDRS--GRIAVYVQETSGFNSEIRTVPTAGTGS 107

Query: 382 QERLLVED-------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              ++          +  ++PT+SP GR ++FS   DG     L  ++ +G     +   
Sbjct: 108 PSTVIASGDASCPTCTQFRSPTFSPDGRVIVFSFN-DGSGALSLGRVNADGSGFQELTPN 166

Query: 435 AYASDPQWVGFMD 447
              S      F D
Sbjct: 167 TSTSFGAPSFFPD 179


>gi|301122373|ref|XP_002908913.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099675|gb|EEY57727.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 299

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 67/215 (31%), Gaps = 17/215 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+  +   + V++     +     +    L++  +SP++ ++   +   +    V   D 
Sbjct: 71  VTSSLDCQIRVLNLASGAVEKTIDAGPGELWQVAYSPDETQLVSGSQQGK----VNFFDL 126

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFI 303
           + ++  + I      +L+  +S +GK             +   D+++     +  +    
Sbjct: 127 KAEKIVQEIATSAKFVLSVAYSPDGKHVAC---GGFDGFVGVYDVETGTLVHKYEDRTKP 183

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S +YSPD        D      + V      +         +       SP G   A 
Sbjct: 184 VRSVAYSPDGKLFAASDD----MHINVYDVAHDNAVATLSGHVSWVLSVACSPDGTQFA- 238

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           T  +  +  I     D    R L          WS
Sbjct: 239 TGGADRRVKIW----DLGTRRCLTTFDTHTDQVWS 269


>gi|108763105|ref|YP_635190.1| WD-40-like beta propeller repeat-containing protein [Myxococcus
           xanthus DK 1622]
 gi|108466985|gb|ABF92170.1| WD40-like beta propeller repeat protein [Myxococcus xanthus DK
           1622]
          Length = 329

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/241 (19%), Positives = 79/241 (32%), Gaps = 41/241 (17%)

Query: 218 RFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFR----SMILAPRFSSNGKRA 272
            FSP+Q++V +   DD      +Y      +    R    R         P FS +G+  
Sbjct: 59  AFSPDQRRVLFGRADDRFQQYTLYETQLTEEGHWSRPVLPRFATEWSNADPHFSPDGRTV 118

Query: 273 LISVQKDE----------AMDIYSVDLQSN--ATERLTNTLFINISASYSPD---SSQIV 317
                + E           +   S+D         RL   +       +SP    +  + 
Sbjct: 119 YFISNRPELGEQGPRSSYDIWAASLDADGAWEDARRLPAPVNDKHRDEWSPAVAANGNLY 178

Query: 318 FESDREGK---EQLYVMQSNGSDQKRISQDKEASYFD-----PVWSPQGDLIAFTKFSG- 368
           F  +R+G      L+V +      +                 P  +P    + F+     
Sbjct: 179 FGGERDGTLGGSDLWVSRWVDGAYQPPENLGPGINSSVHELEPWIAPDESYLIFSALRRE 238

Query: 369 ---EKFAIGVMKK-DG--SQERLLVEDSNLQAP----TWSPSGRSLIFSRKKD--GDTGS 416
                + + + +K DG  +  R L E  N  A     + SP G+ L FS  +   GD G+
Sbjct: 239 DGLGGYDLFLSRKVDGAWTPARRLCEGINTPASDYNHSVSPDGKWLYFSSTRPFTGDVGA 298

Query: 417 K 417
           +
Sbjct: 299 R 299



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 66/192 (34%), Gaps = 37/192 (19%)

Query: 211 DQILFEPRFSPNQQKVAYAT-------YDDEDILRVYLMDTRID-------RAPKRIGNF 256
           +    +P FSP+ + V + +               ++      D       R P  + + 
Sbjct: 103 EWSNADPHFSPDGRTVYFISNRPELGEQGPRSSYDIWAASLDADGAWEDARRLPAPVNDK 162

Query: 257 RSMILAPRFSSNGKRALISVQKDE---AMDIYS---VDLQSNATERLTNTLFINIS---- 306
                +P  ++NG       ++D      D++    VD      E L     IN S    
Sbjct: 163 HRDEWSPAVAANGN-LYFGGERDGTLGGSDLWVSRWVDGAYQPPENL--GPGINSSVHEL 219

Query: 307 -ASYSPDSSQIVFESDR-----EGKEQLYVMQSNG--SDQKRISQD--KEASYFDPVWSP 356
               +PD S ++F + R      G +     + +G  +  +R+ +     AS ++   SP
Sbjct: 220 EPWIAPDESYLIFSALRREDGLGGYDLFLSRKVDGAWTPARRLCEGINTPASDYNHSVSP 279

Query: 357 QGDLIAFTKFSG 368
            G  + F+    
Sbjct: 280 DGKWLYFSSTRP 291



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 25/148 (16%)

Query: 297 LTNTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSNGSD----QKRISQDKEASYF 350
           L  T   +   ++SPD  +++F    DR  +  LY  Q                 E S  
Sbjct: 48  LFTTGAWDFFMAFSPDQRRVLFGRADDRFQQYTLYETQLTEEGHWSRPVLPRFATEWSNA 107

Query: 351 DPVWSPQGDLIAFTKFSGE--------KFAIGV--MKKDGS--QERLLVEDSNL-----Q 393
           DP +SP G  + F     E         + I    +  DG+    R L    N       
Sbjct: 108 DPHFSPDGRTVYFISNRPELGEQGPRSSYDIWAASLDADGAWEDARRLPAPVNDKHRDEW 167

Query: 394 APTWSPSGRSLIFSRKKDGD-TGSKLYS 420
           +P  + +G  L F  ++DG   GS L+ 
Sbjct: 168 SPAVAANGN-LYFGGERDGTLGGSDLWV 194



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 46/146 (31%), Gaps = 25/146 (17%)

Query: 323 EGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            G+    +    G+    +         A  F   +SP    + F +         + + 
Sbjct: 25  GGRPATALENHGGTCTPELYGAGLFTTGAWDFFMAFSPDQRRVLFGRADDRFQQYTLYET 84

Query: 379 DGSQE---------RLLVEDSNLQAPTWSPSGRSLIFSRKK------DGDTGSKLY--SI 421
             ++E         R   E SN   P +SP GR++ F   +         +   ++  S+
Sbjct: 85  QLTEEGHWSRPVLPRFATEWSNAD-PHFSPDGRTVYFISNRPELGEQGPRSSYDIWAASL 143

Query: 422 DLNGRNE--TLINTPAYASD-PQWVG 444
           D +G  E    +  P       +W  
Sbjct: 144 DADGAWEDARRLPAPVNDKHRDEWSP 169



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 71/225 (31%), Gaps = 26/225 (11%)

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
              DR + ++ L++     Q+  +  +S P   R      + D + S  G    F S   
Sbjct: 71  RADDRFQ-QYTLYET----QLTEEGHWSRPVLPRFATEWSNADPHFSPDGRTVYFISNRP 125

Query: 179 FVSESVVSGIIKNSLCVMDRDGA-----NIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            + E             +D DGA      +      + +  + P  + N         D 
Sbjct: 126 ELGEQGPRSSYDIWAASLDADGAWEDARRLPAPVNDKHRDEWSPAVAANGNLYFGGERDG 185

Query: 234 ---EDILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKD----EAMD 283
                 L V        + P+ +G   N     L P  + +    + S  +        D
Sbjct: 186 TLGGSDLWVSRWVDGAYQPPENLGPGINSSVHELEPWIAPDESYLIFSALRREDGLGGYD 245

Query: 284 IYS---VDLQSNATERL---TNTLFINISASYSPDSSQIVFESDR 322
           ++    VD       RL    NT   + + S SPD   + F S R
Sbjct: 246 LFLSRKVDGAWTPARRLCEGINTPASDYNHSVSPDGKWLYFSSTR 290


>gi|154285760|ref|XP_001543675.1| dipeptidyl-peptidase V precursor [Ajellomyces capsulatus NAm1]
 gi|150407316|gb|EDN02857.1| dipeptidyl-peptidase V precursor [Ajellomyces capsulatus NAm1]
          Length = 687

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 44/308 (14%), Positives = 90/308 (29%), Gaps = 68/308 (22%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           GK +    A  R  +  I D IY         + +       S        +    D D 
Sbjct: 115 GKLYNKEQAEKRYSSARIYDSIYAR---HWDTWLTPEFNAVFSGTLKKGYGNAYTFDGDL 171

Query: 201 ANIRYLTPSRDQILFEPRF--------SPNQQKVAYAT---------------YDDEDIL 237
            N+  ++P +      P F        SP+ + VA+ +               +      
Sbjct: 172 HNL--VSPVKHAECPNPPFGGAGDYDLSPDGKTVAFMSKAPELPKANLTTSYIFIVPHDG 229

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQS 291
                     ++   +        +P FS + K+         S + D    +Y   L  
Sbjct: 230 SSVAFPINGPKSGAAVNGIVGASSSPAFSPDSKKIAYLQMEERSYEADRRT-VYVSTLDG 288

Query: 292 NATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +    L +    + S     ++PD   +    +   + +L+ + +N S          A+
Sbjct: 289 SKIISLASN--WDRSPDALKWAPDGESLYLSVEDRARGRLFTLPANAS----------AN 336

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGR-S 403
           Y    ++  G + AF                     +L   + + +       SP  +  
Sbjct: 337 YVPKNFTDHGIVSAFHFLKDS-------------PSVLTTTTTIWSNAIYTIASPDEKPK 383

Query: 404 LIFSRKKD 411
           ++FS  + 
Sbjct: 384 ILFSANEH 391



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 75/206 (36%), Gaps = 17/206 (8%)

Query: 191 NSLCVMDRDGANIRYLTPSRD---------QILFEPRFSPNQQKVAYATYDDE----DIL 237
           + + ++  DG+++ +                    P FSP+ +K+AY   ++     D  
Sbjct: 220 SYIFIVPHDGSSVAFPINGPKSGAAVNGIVGASSSPAFSPDSKKIAYLQMEERSYEADRR 279

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---T 294
            VY+      +      N+     A +++ +G+   +SV+      ++++   ++A    
Sbjct: 280 TVYVSTLDGSKIISLASNWDRSPDALKWAPDGESLYLSVEDRARGRLFTLPANASANYVP 339

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +  T+   I  +  +  DS  ++  +       +Y + S     K +    E        
Sbjct: 340 KNFTDH-GIVSAFHFLKDSPSVLTTTTTIWSNAIYTIASPDEKPKILFSANEHDAELAGL 398

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDG 380
            P+     +   +  K    ++K +G
Sbjct: 399 GPEDIEEFYFDGNWTKIHSWIVKPEG 424



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 39/124 (31%), Gaps = 25/124 (20%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVED-------- 389
                 D   SP G  +AF   + E          I ++  DGS     +          
Sbjct: 187 PFGGAGDYDLSPDGKTVAFMSKAPELPKANLTTSYIFIVPHDGSSVAFPINGPKSGAAVN 246

Query: 390 ---SNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDP--- 440
                  +P +SP  + + + + ++    +    +Y   L+G     + +  +   P   
Sbjct: 247 GIVGASSSPAFSPDSKKIAYLQMEERSYEADRRTVYVSTLDGSKIISLASN-WDRSPDAL 305

Query: 441 QWVG 444
           +W  
Sbjct: 306 KWAP 309


>gi|156843356|ref|XP_001644746.1| hypothetical protein Kpol_1024p42 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115395|gb|EDO16888.1| hypothetical protein Kpol_1024p42 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 843

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 79/229 (34%), Gaps = 30/229 (13%)

Query: 219 FSPNQQKV-AYATYDDEDILRVYLMDTRIDRAPK---------RIGNFRSMILAPRFSSN 268
           +S +   +    + ++    +    D  +    K         ++      + +  FS +
Sbjct: 515 WSLDGSSLDTLTSTNNTHFTKKNTADNNLHSKKKHQEHVNTNTKLVGHSGAVYSTSFSPD 574

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQ 327
             + LIS  +D+ + ++++D QS        N    ++  ++SP        +  +   +
Sbjct: 575 -NKLLISGSEDKTVRLWAMDTQSTLVSYKGHNHPVWDV--AFSPMGHYFA-TASHDQTAR 630

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           L+      S   RI     +      + P G  + FT  S +   +        +   L 
Sbjct: 631 LWSCDHIYS--LRIFAGHLSDVDCVTFHPNGCYV-FTGSSDKTCRMW--DVSTGETVRLF 685

Query: 388 EDSNLQAPT--WSPSGRSLIFSRKKDG-------DTGSKLYSIDLNGRN 427
                   +   SP GR L  S  +DG        +G +L  +  +GRN
Sbjct: 686 LGHTAPVVSLGVSPDGRWLA-SGSEDGLINVWDIGSGKRLKQMRGHGRN 733



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 73/209 (34%), Gaps = 19/209 (9%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N           ++   FSP+ + +   + D    +R++ MDT+      +  N    + 
Sbjct: 554 NTNTKLVGHSGAVYSTSFSPDNKLLISGSED--KTVRLWAMDTQSTLVSYKGHNHP--VW 609

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES 320
              FS  G     +   D+   ++S D   +   R+      ++   ++ P+    VF  
Sbjct: 610 DVAFSPMGHYFA-TASHDQTARLWSCDHIYSL--RIFAGHLSDVDCVTFHPNGCY-VFTG 665

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +   +++    +  +  R+     A       SP G  +A     G    I V    G
Sbjct: 666 SSDKTCRMW--DVSTGETVRLFLGHTAPVVSLGVSPDGRWLASGSEDG---LINVWDI-G 719

Query: 381 SQERLLVEDSN----LQAPTWSPSGRSLI 405
           S +RL     +    + +  +S  G  +I
Sbjct: 720 SGKRLKQMRGHGRNAVNSIVFSQEGTVII 748


>gi|115378090|ref|ZP_01465267.1| hypothetical protein STIAU_2223 [Stigmatella aurantiaca DW4/3-1]
 gi|115364877|gb|EAU63935.1| hypothetical protein STIAU_2223 [Stigmatella aurantiaca DW4/3-1]
          Length = 792

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 76/241 (31%), Gaps = 16/241 (6%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E+G FN  +     +V     +  L  +D  G  +    P   +     R       +A+
Sbjct: 270 ERGAFN-VLKQARPTVGGFSAEGRLFTVDIQGE-LHSWKPGTSERHLIARDLGIGTSLAF 327

Query: 229 A----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
                         V  +        + +     ++ +   +S+G+    S   D    +
Sbjct: 328 VPGTPWVVIGTQEGVIRLRNHATGQMRELRQHEGLVNSLAVTSDGRYLA-SASADRTSVL 386

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +   L++     L           +SPD  Q+   S   G+ +L+ M+   ++  R    
Sbjct: 387 WE--LETGEPRVLRRARQQAHLVQFSPDDRQLAVASF-NGQVRLFSME---TNLHRKLSV 440

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             A       S  G  +A     G+   + ++     +  L        A  +SP G+ L
Sbjct: 441 GTAPQVSLELSSDGQRLASLSARGD---LRLLDASSGKVLLEAPGFVPDAMAFSPDGQWL 497

Query: 405 I 405
            
Sbjct: 498 A 498



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 46/310 (14%), Positives = 107/310 (34%), Gaps = 34/310 (10%)

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                E RL+ V  + ++   K  +S        H I+ D+            + + FV 
Sbjct: 285 GGFSAEGRLFTVDIQGELHSWKPGTSER------HLIARDL---------GIGTSLAFVP 329

Query: 182 ESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            +    I      +  R+ A  +       + ++     + + + +A A+ D   +    
Sbjct: 330 GTPWVVIGTQEGVIRLRNHATGQMRELRQHEGLVNSLAVTSDGRYLASASADRTSV---- 385

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L +      P+ +   R      +FS + ++  ++   +  + ++S+  ++N   +L+  
Sbjct: 386 LWELETGE-PRVLRRARQQAHLVQFSPDDRQLAVA-SFNGQVRLFSM--ETNLHRKLSVG 441

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +S   S D  ++   S R     L ++ ++       +           +SP G  
Sbjct: 442 TAPQVSLELSSDGQRLASLSARG---DLRLLDASSGKVLLEAPGFVPDAM--AFSPDGQW 496

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +A     G +  +       +Q  LL   + + +  +S  G  L      D      L++
Sbjct: 497 LAAGGLDG-RVHVFAAATGSAQPVLLGHGARVTSVIFSRDGHRLA---TADEQGEVWLWA 552

Query: 421 IDLNGRNETL 430
              +G+   L
Sbjct: 553 PS-SGKGHRL 561



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 83/251 (33%), Gaps = 24/251 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G +   + V      + + +       +    FS +  ++A A    E    V+L    
Sbjct: 499 AGGLDGRVHVFAAATGSAQPVLLGHGARVTSVIFSRDGHRLATADEQGE----VWLWAPS 554

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +   R+G     +    FS  G     S   D  + ++  D+ + +   L        
Sbjct: 555 SGK-GHRLGGQGVKVWQLAFSPGGGHIA-SAGDDGTVRLW--DVATGSFRTLAGHRGAVR 610

Query: 306 SASYSPD---SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           + ++SP       +V      G +   +     S Q            +  +SPQGD++A
Sbjct: 611 AVAFSPKPLKGDLLV----TGGMDHRVIFWELESGQNHSHTTSGGGVLELRYSPQGDVVA 666

Query: 363 FTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                  +  +        +     +L   +++    +SP G  L  +     D  ++L+
Sbjct: 667 SRDQKDGRVRLW--DGRTGEPHPIPVLTHQADVLGLAFSPDGTRLASASL---DKTARLW 721

Query: 420 SIDLNGRNETL 430
            +   G +  L
Sbjct: 722 DL-ATGESRAL 731



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 72/216 (33%), Gaps = 31/216 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G +   G D      RLWDV        +       + R +A                 F
Sbjct: 578 GHIASAGDDG---TVRLWDVATGS---FRTLAGHRGAVRAVA-----------------F 614

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + + L     V  G+    +      G N  + T     +    R+SP    VA  + D 
Sbjct: 615 SPKPLKGDLLVTGGMDHRVIFWELESGQNHSHTTSGGGVLEL--RYSPQGDVVA--SRDQ 670

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +D           +  P  +   ++ +L   FS +G R   S   D+   ++  DL +  
Sbjct: 671 KDGRVRLWDGRTGEPHPIPVLTHQADVLGLAFSPDGTRLA-SASLDKTARLW--DLATGE 727

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +  L        + ++ P+   +   + ++G  +L+
Sbjct: 728 SRALRGHTGPVEAVAFFPEGKTLA-STGQDGSLRLW 762


>gi|170079328|ref|YP_001735966.1| prolyl oligopeptidase family protein [Synechococcus sp. PCC 7002]
 gi|169886997|gb|ACB00711.1| prolyl oligopeptidase family [Synechococcus sp. PCC 7002]
          Length = 643

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 101/302 (33%), Gaps = 57/302 (18%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDG---------ANIRYLTPSRDQILFEPR---- 218
            +    L+  E       +N L   + DG          N+R          F       
Sbjct: 32  AWAGTDLYWLEGRPQEKGRNVLVKRNGDGTTVDITPPDFNVRSRVHEYGGGAFLITETGT 91

Query: 219 --FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             FS +  +  Y    +++          I    +R  +F             +  LI V
Sbjct: 92  VYFSNDGDRHVYVQKPNQEP------QALIPENQRRYADFILDAA--------RNRLICV 137

Query: 277 QKDEAM-------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----DREG- 324
            +D ++       D+ ++ L S   + L        S   SPD   + + S    D    
Sbjct: 138 SEDHSVPGHEPKNDLVAIALDSGDIQVLVEGNDFYTSPRLSPDGKTLAWVSWDHPDMPWD 197

Query: 325 KEQLYV--MQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             QL++  +Q++G   ++  ++     S  +P WSP G ++ F+      + +     +G
Sbjct: 198 NSQLWIAEIQADGTLGEKTLVAGGNGESVVEPRWSPGG-VLYFSGDRSGYWNLYRY-VEG 255

Query: 381 SQERLLVEDSNLQAPTW--------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + + +   ++    P W             +L+ +    G    KL +++ + R  T I 
Sbjct: 256 TAQVVYPAEAEFGYPHWVFGESILGFIDETTLVCTYNDHGTW--KLATLNPDRRALTPIP 313

Query: 433 TP 434
            P
Sbjct: 314 VP 315


>gi|328778625|ref|XP_623624.3| PREDICTED: WD repeat-containing protein 61-like [Apis mellifera]
          Length = 327

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 70/201 (34%), Gaps = 24/201 (11%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            T   +D ++V+    +  +   ++      +++   SS+G +            +   D
Sbjct: 53  VTGSVDDTVKVWEQKDKSLQLKHKLTGHSLGVVSVAVSSDGSKCA---SSSLDSSLKLWD 109

Query: 289 LQSNATERLTNTLFINISAS------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           L++           I +         +SPD   IV  S   GK  LY  + +G  ++ + 
Sbjct: 110 LETGNKI-----SSIEVGPVDIWTVVFSPDDKFIVSGSH-SGKIHLYGTE-SGKQEQTLD 162

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPS 400
                      +SP G  IA     G    I +      +    +E   +  ++  +SP 
Sbjct: 163 TRGGKFTLSVAYSPDGKYIASGAIDG---IINIFDVTYGKVLRTLEGHAMPIRSLCFSPD 219

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
            + L+ +     D   KLY +
Sbjct: 220 SQLLLTASD---DGHMKLYDV 237



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 65/180 (36%), Gaps = 19/180 (10%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   + L     +      +SP+ + +A    D      + + D    +  + +      
Sbjct: 155 GKQEQTLDTRGGKFTLSVAYSPDGKYIASGAIDG----IINIFDVTYGKVLRTLEGHAMP 210

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQI 316
           I +  FS +  + L++   D  M +Y V   +L       ++      +  +++P+  Q 
Sbjct: 211 IRSLCFSPD-SQLLLTASDDGHMKLYDVKDANLAGT----MSGHASWVLGVAFAPNGQQF 265

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIG 374
              S  +   +++ +    + ++ +    E +   +   ++PQ + I  +    +   + 
Sbjct: 266 A-SSSSDHTVKVWEL----AQRQCLHTFNEHNDQVWAVKYNPQRNNIIASVSEDKSINLY 320


>gi|166710469|ref|ZP_02241676.1| dipeptidyl peptidase IV [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 774

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 59/376 (15%), Positives = 108/376 (28%), Gaps = 84/376 (22%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
             D +  +  +  +     R  AH     +Y     E G     +L   +   + I   +
Sbjct: 123 TADGRYRLNVRDTAVVCDAR--AH--CSKLYAKDKPEPG-----VLSPDKRSEAFIRDWN 173

Query: 193 LCVMD----------RDG-ANIRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILR 238
           L V D          RDG  N  Y T +      +     +SP+  K+A    D      
Sbjct: 174 LWVRDLASGQETQLTRDGVENFGYATDNAGWQHTDNAIVAWSPDSSKIATFQQDQRKTGD 233

Query: 239 VYLMDTRIDRAPKRIGNFR-----------------------SMILAPR----------- 264
           +YL+ T++     +   +                         +  AP            
Sbjct: 234 MYLVSTKLGHPELQSWKYPLAGDKDVTMIERVIIDVPTRSVLRLKTAPDQHRSTLCDDVS 293

Query: 265 ----------FSSNGKRALISVQKDEAMD--IYSVDLQSNATE------RLTNTLFINIS 306
                     ++ + K    +          +   D  + A          T      ++
Sbjct: 294 CSPDLWDDVKWAPDSKTLAFASTSRFHKQTGLRIADAGTGAVRTAFDETVKTYYESGQVA 353

Query: 307 ASYS--PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           A+++  P S++ V+ S+R    QLY+        KR     E +  + +        A+ 
Sbjct: 354 ANWAYLPASNEAVWFSERSDWGQLYLYDLATGKPKRAITTGEGNVTELLRVDPVTRTAWF 413

Query: 365 KFSGEK-------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              G           +  +  DG +  LL  +    +   SP G   + S          
Sbjct: 414 VGVGRSAGVDPYYQQLWKVSLDGGEPVLLTPEPANHSIALSPDGARFVDSYSTSVTPPVT 473

Query: 418 LYSIDLNGRNETLINT 433
           L     +GR  + I T
Sbjct: 474 LLRDAGDGRTVSTIAT 489


>gi|288921684|ref|ZP_06415952.1| hypothetical protein FrEUN1fDRAFT_5650 [Frankia sp. EUN1f]
 gi|288346903|gb|EFC81212.1| hypothetical protein FrEUN1fDRAFT_5650 [Frankia sp. EUN1f]
          Length = 378

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 57/174 (32%), Gaps = 16/174 (9%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F++R   +     + +       + +DGA  R +    D   +   F+ +     YAT
Sbjct: 202 GTFSTRTSILDTRTWTLVRSLEEYQVIKDGAPYRNV----DINFWGVTFADDG--HFYAT 255

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEAMDIY 285
                   +     R D   K +   R  +  P  S +G R            D     Y
Sbjct: 256 LGTGGKTYL----VRGDVQAKTVTTLRENVECPSLSPDGTRLAFKKRIPDAPTDAPWHEY 311

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            +DL++     L     ++  A +  D   + +    +    L+ +  +G+   
Sbjct: 312 VLDLRTMRETPLAEQRSVDDQAVWL-DDHTVAYALAGDYGSDLWTVPVDGTGSP 364



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 50/138 (36%), Gaps = 15/138 (10%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
           +++ D           GK  L          K ++  +E +   P  SP G  +AF K  
Sbjct: 245 TFADDGHFYA-TLGTGGKTYLVRGDV---QAKTVTTLRE-NVECPSLSPDGTRLAFKKRI 299

Query: 367 ----SGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +   +   V+     +E  L E  +      W      + ++    GD GS L+++
Sbjct: 300 PDAPTDAPWHEYVLDLRTMRETPLAEQRSVDDQAVWLDDHT-VAYAL--AGDYGSDLWTV 356

Query: 422 DLNGRN-ETLINTPAYAS 438
            ++G    T + T A A 
Sbjct: 357 PVDGTGSPTRLATAALAP 374



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 47/169 (27%), Gaps = 26/169 (15%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEA 347
             R      I   A  S     + +       S   G         +      +   +E 
Sbjct: 166 ERRHFALTGIPTRARVSDSGRMMAWTVFVSGDSYAGGTFSTRTSILDTRTWTLVRSLEEY 225

Query: 348 --------------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                         +++   ++  G    F    G      +++ D   + +     N++
Sbjct: 226 QVIKDGAPYRNVDINFWGVTFADDGH---FYATLGTGGKTYLVRGDVQAKTVTTLRENVE 282

Query: 394 APTWSPSGRSLIFSRKKDG---DTGSKLYSIDLNGRNETLINTPAYASD 439
            P+ SP G  L F ++      D     Y +DL    ET +       D
Sbjct: 283 CPSLSPDGTRLAFKKRIPDAPTDAPWHEYVLDLRTMRETPLAEQRSVDD 331


>gi|223938861|ref|ZP_03630748.1| serine/threonine protein kinase with WD40 repeats [bacterium
           Ellin514]
 gi|223892414|gb|EEF58888.1| serine/threonine protein kinase with WD40 repeats [bacterium
           Ellin514]
          Length = 993

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 93/277 (33%), Gaps = 27/277 (9%)

Query: 135 DRKQIIGKKFFSSPASW----RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           D K ++      +   W    RK+ H+   ++        G    R L ++         
Sbjct: 420 DGKWLVTGSQDGTAKLWDVKGRKLIHSF--EVTPGAVWSVGFSPERDLVMTAGAGD---- 473

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
               V   D  +   ++    QI      S     VA +        R   ++ R  R  
Sbjct: 474 ---QVKFWDTKDFHLVSELPGQIA---SLSKTGSVVAISHSSPFFWERSGFVELRDYRTG 527

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            ++    S   A   S +GKR         + D+   D+ S       +T     S ++S
Sbjct: 528 AKLKGISSKARAVALSPDGKRLA---GAGPSHDVEIWDVASGEKIGAISTQKPIWSVTFS 584

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PDS +++  +D   +  L+ +    S +K   +    + +  ++SP G  I     +G  
Sbjct: 585 PDSKKLL-TTDWSNEASLWELDLLVSPRKL--KGHNLTVWSAMFSPNGKQIV---TTGSD 638

Query: 371 FAIGVMKKDG--SQERLLVEDSNLQAPTWSPSGRSLI 405
             I +       ++  L    + +     +P GR L 
Sbjct: 639 QTIRIWDTATLETEGVLRGHGNEVWCAALTPDGRFLA 675



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 44/299 (14%)

Query: 147 SPASWRKIA--H--TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
             A+ R+IA  H   ++ ++Y +          R  +         +K     +D  G  
Sbjct: 330 GEANQRRIAEEHGRKMALNLYAADMSVASQAAQRGDYGLARRTLSALKPKAGDVDLRGFE 389

Query: 203 IRYL-----------TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
             YL                 I+    FS + + +   + D        L D +  +   
Sbjct: 390 WFYLWNQCEGDQLAVLTGHAWIVTCIAFSSDGKWLVTGSQDG----TAKLWDVKGRKLIH 445

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                   + +  FS   +  +++    + +  +     +     ++        AS S 
Sbjct: 446 SFEVTPGAVWSVGFSPE-RDLVMTAGAGDQVKFW----DTKDFHLVSELPGQI--ASLSK 498

Query: 312 DSSQIV------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             S +       F  +R G  +L   ++ G+  K IS    A       SP G  +A   
Sbjct: 499 TGSVVAISHSSPFFWERSGFVELRDYRT-GAKLKGISSKARA----VALSPDGKRLA--- 550

Query: 366 FSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +G    + +     G +   +     + + T+SP  + L+     D    + L+ +DL
Sbjct: 551 GAGPSHDVEIWDVASGEKIGAISTQKPIWSVTFSPDSKKLL---TTDWSNEASLWELDL 606



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 16/146 (10%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           FS + K+   S+     + ++  D +S             I A+  +PD   +    +RE
Sbjct: 795 FSQDYKK-FFSIGVSGTIRVW--DAKSGKLTWSAQGPKPPIRAAELAPDGKLLAVSLERE 851

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +LY  QS+G  QK + +          +SP    +A     G    I V     S+ 
Sbjct: 852 NSVRLY--QSDGKSQKEL-KGHRDFVSGLAFSPDATSLATGSMDGT---IKVWN--TSKG 903

Query: 384 RLLVE-DSNLQAP---TWSPSGRSLI 405
           + L +   ++Q     ++SP G++L 
Sbjct: 904 QWLFDLPGHMQEVTDVSFSPDGKTLA 929



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 5/89 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS   +NS+ +   DG + + L   RD +     FSP+   +A  + D      + + +T
Sbjct: 846 VSLERENSVRLYQSDGKSQKELKGHRDFVSGL-AFSPDATSLATGSMDG----TIKVWNT 900

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
              +    +      +    FS +GK   
Sbjct: 901 SKGQWLFDLPGHMQEVTDVSFSPDGKTLA 929


>gi|75906398|ref|YP_320694.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75700123|gb|ABA19799.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 346

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 57/192 (29%), Gaps = 20/192 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S + + +     D      + + D    R    +  F + I A   SS+G+       
Sbjct: 151 AVSSDGKVLVSGALDG-----IRVWDLLQQRPLSTLVRFDNRIDALAMSSDGQTLA---S 202

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIV-FESDREGKEQLYVMQSNG 335
            D    I   +L +    R  T          ++PD   ++   SDR     + V     
Sbjct: 203 GDTKGVIKLWNLSTGKLIREFTAHSGTVTDIVFTPDGQNLISCSSDRT----IKVWHIPS 258

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQ 393
               R              +  G  +A     G    I +      +    L+     + 
Sbjct: 259 EKLSRTLTGHNNWVNAIAINRDGKTLASAGRDG----IKLWDLSTGELLNTLIGHSDWVS 314

Query: 394 APTWSPSGRSLI 405
           A  +SP G++L 
Sbjct: 315 AIAFSPDGKTLA 326



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 56/177 (31%), Gaps = 10/177 (5%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V D             D  +     S + Q +A  + D + +  + L +    +  + 
Sbjct: 167 IRVWDLLQQRPLSTLVRFDNRIDALAMSSDGQTLA--SGDTKGV--IKLWNLSTGKLIRE 222

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                  +    F+ +G+   IS   D  + ++ +  +   +  LT       + + + D
Sbjct: 223 FTAHSGTVTDIVFTPDGQNL-ISCSSDRTIKVWHIPSE-KLSRTLTGHNNWVNAIAINRD 280

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
              +       G++ + +   +  +                +SP G  +A   F G 
Sbjct: 281 GKTLA----SAGRDGIKLWDLSTGELLNTLIGHSDWVSAIAFSPDGKTLASGGFDGR 333



 Score = 43.1 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 80/246 (32%), Gaps = 27/246 (10%)

Query: 201 ANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-- 256
            N R L    +    +    FSP+ + +      ++ I+R++   T      KR+G    
Sbjct: 45  TNPRLLHSLNAHSGRVKSLTFSPDSRTIFSGGAYNDGIIRLWNSTTG-----KRVGTINK 99

Query: 257 --RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDS 313
             ++ + +   S +G+    S   D  ++++  +L++N   R         +S + S D 
Sbjct: 100 AQKNAVESLVISPDGQTLASSGS-DNIINLW--NLKNNQFTRSFVGHTASVMSLAVSSDG 156

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +V        + + V               +        S  G  +A       K  I
Sbjct: 157 KVLV----SGALDGIRVWDLLQQRPLSTLVRFDNRIDALAMSSDGQTLA---SGDTKGVI 209

Query: 374 GVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +      +           +    ++P G++LI       D   K++ I     + TL 
Sbjct: 210 KLWNLSTGKLIREFTAHSGTVTDIVFTPDGQNLI---SCSSDRTIKVWHIPSEKLSRTLT 266

Query: 432 NTPAYA 437
               + 
Sbjct: 267 GHNNWV 272


>gi|112490205|pdb|2CNX|A Chain A, Wdr5 And Histone H3 Lysine 4 Dimethyl Complex At 2.1
           Angstrom
 gi|112490210|pdb|2CO0|C Chain C, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom
          Length = 315

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 82/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             + +      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 16  YALMFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 71

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 72  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 128

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 129 SF---DESVRIWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 183

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 225


>gi|194750027|ref|XP_001957433.1| GF10412 [Drosophila ananassae]
 gi|190624715|gb|EDV40239.1| GF10412 [Drosophila ananassae]
          Length = 403

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/289 (17%), Positives = 88/289 (30%), Gaps = 61/289 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  +  D A  R+ T     I    RFSP+  ++A ++ D      V L + +      R
Sbjct: 1   MQGLFSDPALERHFTGHSGGITQL-RFSPDGSQIATSSTDS----SVILWNLKQAARCIR 55

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-------------------SVDLQSNA 293
             +    +    +S  G     S   D  + I+                   SVD     
Sbjct: 56  FASHTGAVNGVAWSPKGNLIA-SAGHDRTVKIWEPKVRGVSGEFVAHSKPVRSVDFDPTG 114

Query: 294 TERLTNTLF----------------------INISASYSPDSSQIVFESDREGKEQLYVM 331
            + LT +                           SA +SP+   +   SD    + L + 
Sbjct: 115 HQLLTASDDKSAKLWRVARRQFIASFAQQCNWVRSAKFSPNGKLVATVSD---DKSLRIY 171

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VED 389
                +  R   ++ A+     W P G+++A          I +     SQ   L  V  
Sbjct: 172 DVGSGECVRTFTEERAAPRQVAWHPWGNMVAVALGCN---RIKIFDVSASQLLQLYVVHS 228

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYA 437
           + +    + P G  L+      G     +  +D L GR    +     A
Sbjct: 229 APVNDVAFHPGGHFLL-----SGSDDHTIRILDLLEGRPIYTLTGHTDA 272


>gi|158339559|ref|YP_001520948.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158309800|gb|ABW31416.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1215

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 48/345 (13%), Positives = 108/345 (31%), Gaps = 62/345 (17%)

Query: 128  FRLWDVKDRK---QIIGK-----KFFSSPASWRKIAHTISDD-----------IYQSITG 168
             +LWDV   K    +IG          SP   R  + +  +            I+     
Sbjct: 705  LKLWDVATGKCLKTLIGHHNWIWSVAYSPDGQRVASGSHDNTVKVWNVSSGSCIHTLRGH 764

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP------- 221
                ++         + SG    ++ + D    +   +    D  ++   FSP       
Sbjct: 765  TNWIWSVAFNPQGNIIASGSEDQTVRLWDVYSGHCLKILDGHDHRIWSVTFSPQPLMSML 824

Query: 222  -----NQQKVAYATYDDEDILRVYLM-----------------DTRIDRAPKRIGNFRSM 259
                 ++Q+   A+  ++  +R++ +                      +  + +      
Sbjct: 825  SSEKLSRQQALLASGSEDQTVRLWDVSWLESGTSEATSKPQSVHVLTSQCLQTLQGHTQQ 884

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVF 318
            +    FS +GK  +      +   +   D+ +    + L        S  +SPD   +  
Sbjct: 885  VWTVAFSPDGKTIV---SSGDEQFLRFWDVATGTCYKTLKGHPRRVTSVVFSPDGKLLAS 941

Query: 319  ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
              +    + + +  +      +I +      +  V++  G L+A     G    I +   
Sbjct: 942  CGE---DQTIRLWDAQKGQCLKILKGHTKQLWTTVFNADGSLLA---SGGGDQTIRLWDV 995

Query: 379  DGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
               Q   ++E  +    +  +SP+  +L+ S     D   KL+ I
Sbjct: 996  QTGQCLKVLEGHDSCVWSLDFSPTDATLLASASY--DQTLKLWDI 1038



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 78/232 (33%), Gaps = 20/232 (8%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                   Q ++   FSP+ + +        D   +   D       K +      + +  
Sbjct: 876  QTLQGHTQQVWTVAFSPDGKTIV----SSGDEQFLRFWDVATGTCYKTLKGHPRRVTSVV 931

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK    S  +D+ + ++  D Q     + L        +  ++ D S +       
Sbjct: 932  FSPDGKLLA-SCGEDQTIRLW--DAQKGQCLKILKGHTKQLWTTVFNADGSLLA---SGG 985

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G + + +         ++ +  ++  +   +SP    L+A   +      + +   +  +
Sbjct: 986  GDQTIRLWDVQTGQCLKVLEGHDSCVWSLDFSPTDATLLASASYDQT---LKLWDIEEGK 1042

Query: 383  ERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                +ED    +Q+  +S  G  L+       D   +L+S    G    ++ 
Sbjct: 1043 CFNTLEDHEGAVQSIAFSGDGTQLV--SGSMFDQTVRLWST-ATGECLQVLP 1091



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/257 (11%), Positives = 79/257 (30%), Gaps = 23/257 (8%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            G   +      E + +G     + V         +        +    F+     +A  
Sbjct: 556 SGILATEFSSDGELLATGDTNCDVGVWSVANGQPLHTLQGHSDWVRTVAFNSESTLLA-- 613

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                D   + L D +  +  + +   +  +    FS +G    IS  +D  + ++  D+
Sbjct: 614 --SGSDEYTIMLWDLKQGQHLRTLSAHQGQVCTVMFSPDGHTL-ISSSQDLTLRLW--DV 668

Query: 290 QSNATERLTNTLFINISASYSP----DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            +    R+      +    +S     D   ++      G++ +  +    + +   +   
Sbjct: 669 YTGECLRIFEG---HTQPIWSVQFSMDGQHLI----SGGEDNVLKLWDVATGKCLKTLIG 721

Query: 346 EASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             ++ +   +SP G  +A          +  +        L    + + +  ++P G  +
Sbjct: 722 HHNWIWSVAYSPDGQRVASGSHDNTV-KVWNVSSGSCIHTLRGHTNWIWSVAFNPQGNII 780

Query: 405 IFSRKKDGDTGSKLYSI 421
                   D   +L+ +
Sbjct: 781 A---SGSEDQTVRLWDV 794



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 77/219 (35%), Gaps = 12/219 (5%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            ++ + D        +     + L+   F+ +   +A           + L D +  +  K
Sbjct: 947  TIRLWDAQKGQCLKILKGHTKQLWTTVFNADGSLLA----SGGGDQTIRLWDVQTGQCLK 1002

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             +    S + +  FS      L S   D+ + ++ ++ +      L +      S ++S 
Sbjct: 1003 VLEGHDSCVWSLDFSPTDATLLASASYDQTLKLWDIE-EGKCFNTLEDHEGAVQSIAFSG 1061

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSD-----QKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            D +Q+V  S  +   +L+   +   +      ++I+     S      S + +L+     
Sbjct: 1062 DGTQLVSGSMFDQTVRLW--STATGECLQVLPQQIAMAVAFSPTSSNSSARDELMIAIGG 1119

Query: 367  SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              ++  I    K   Q +L      +    +SP G + +
Sbjct: 1120 GDQRLTIWHPNKGTHQPQLFAHQRMIMDLAFSPDGTTFV 1158



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/306 (14%), Positives = 93/306 (30%), Gaps = 29/306 (9%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVSG 187
            RLWDV        +   S   S  +  H ++    Q++ G      +       +++VS 
Sbjct: 846  RLWDVS-----WLESGTSEATSKPQSVHVLTSQCLQTLQGHTQQVWTVAFSPDGKTIVSS 900

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              +  L   D              + +    FSP+ + +A    D      + L D +  
Sbjct: 901  GDEQFLRFWDVATGTCYKTLKGHPRRVTSVVFSPDGKLLASCGEDQ----TIRLWDAQKG 956

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINIS 306
            +  K +      +    F+++G              I   D+Q+    + L        S
Sbjct: 957  QCLKILKGHTKQLWTTVFNADGSLLA---SGGGDQTIRLWDVQTGQCLKVLEGHDSCVWS 1013

Query: 307  ASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              +SP D++ +   S     + L +            +D E +     +S  G  +    
Sbjct: 1014 LDFSPTDATLLASASY---DQTLKLWDIEEGKCFNTLEDHEGAVQSIAFSGDGTQLVSGS 1070

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               +   +        +   ++      A  +SP           +     +L  I + G
Sbjct: 1071 MFDQTVRLW--STATGECLQVLPQQIAMAVAFSP--------TSSNSSARDEL-MIAIGG 1119

Query: 426  RNETLI 431
             ++ L 
Sbjct: 1120 GDQRLT 1125



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 83/270 (30%), Gaps = 48/270 (17%)

Query: 113  TGRVIKEGKDRLRVEF------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
               V+     +L          RLWD +  + +  K                        
Sbjct: 927  VTSVVFSPDGKLLASCGEDQTIRLWDAQKGQCL--KILKGHTKQL--------------- 969

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQK 225
                  + +        + SG    ++ + D        +    D  ++   FSP +   
Sbjct: 970  ------WTTVFNADGSLLASGGGDQTIRLWDVQTGQCLKVLEGHDSCVWSLDFSPTDATL 1023

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +A A+YD      + L D    +    + +    + +  FS +G + +     D+ + ++
Sbjct: 1024 LASASYDQ----TLKLWDIEEGKCFNTLEDHEGAVQSIAFSGDGTQLVSGSMFDQTVRLW 1079

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--------GKEQLYVMQSNGSD 337
            S        + L   + + +  ++SP SS     S R+        G ++L +   N   
Sbjct: 1080 ST-ATGECLQVLPQQIAMAV--AFSPTSSN---SSARDELMIAIGGGDQRLTIWHPNKGT 1133

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +      +    D  +SP G       + 
Sbjct: 1134 HQPQLFAHQRMIMDLAFSPDGTTFVTGSWD 1163


>gi|239926997|ref|ZP_04683950.1| putative acylaminoacyl-peptidase [Streptomyces ghanaensis ATCC
           14672]
 gi|291435345|ref|ZP_06574735.1| peptidase S9 [Streptomyces ghanaensis ATCC 14672]
 gi|291338240|gb|EFE65196.1| peptidase S9 [Streptomyces ghanaensis ATCC 14672]
          Length = 721

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 37/105 (35%), Gaps = 3/105 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P     G+       +     +++  +       L       I  S+SPD   I + +  
Sbjct: 73  PSVDPGGRHVAFVCDRAGVPQLWTGPVDGEEVHLLDADPDPVIEVSWSPDGRWIAYTTAP 132

Query: 323 EGKE--QLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFT 364
            G E  ++  ++ +G+ +  ++  +   S     W   G  +A T
Sbjct: 133 GGGELTRVLCVRPDGTGRHLLAGGEPGTSALLGCWQHDGSAVAVT 177



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 1/92 (1%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGR 402
                 + P   P G  +AF         +     DG +  LL  D + +   +WSP GR
Sbjct: 65  GTVHGCWYPSVDPGGRHVAFVCDRAGVPQLWTGPVDGEEVHLLDADPDPVIEVSWSPDGR 124

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            + ++    G   +++  +  +G    L+   
Sbjct: 125 WIAYTTAPGGGELTRVLCVRPDGTGRHLLAGG 156



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 38/295 (12%), Positives = 75/295 (25%), Gaps = 66/295 (22%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DGA             + P   P  + VA+        +               +    
Sbjct: 58  PDGAPPSGTVHG----CWYPSVDPGGRHVAFVCDRAG--VPQLWTGPVDGEEVHLLDADP 111

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ-SNATERLTNTLFINISA---SYSPDS 313
             ++   +S +G+    +           + ++       L        SA    +  D 
Sbjct: 112 DPVIEVSWSPDGRWIAYTTAPGGGELTRVLCVRPDGTGRHLLAGGEPGTSALLGCWQHDG 171

Query: 314 SQIVFE--------------------------------------SDREGKEQL------- 328
           S +                                         S R   + +       
Sbjct: 172 SAVAVTVTDPVPPRSAHAGPAAPEPPGPPGGARRDGRAVLLDVPSGRGSADGIATVQEPQ 231

Query: 329 ------YVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDL-IAFTKFSGEKFAIGVMKKD 379
                 Y++   G D   +  S+   ++      S  G L + +    G + A+ V  +D
Sbjct: 232 PRTLSAYLVDPEGVDAPVLIASERGASTLRVCDLSRDGRLALLYRGPRGRRQALVVRTRD 291

Query: 380 GSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            +      V D +     +SP   +L + R       + L +  L+ R   L  T
Sbjct: 292 RTVACAFPVADGDPWIGGFSPDAGTL-WLRSDGDREYAALVAARLDPRGHPLGTT 345


>gi|254385599|ref|ZP_05000924.1| peptidase [Streptomyces sp. Mg1]
 gi|194344469|gb|EDX25435.1| peptidase [Streptomyces sp. Mg1]
          Length = 601

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 58/173 (33%), Gaps = 10/173 (5%)

Query: 263 PRFS---SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           P ++    +  RAL         ++Y+ D  +    + T+        + SPD   I + 
Sbjct: 26  PEWAEDAPD--RALFVSNATGTFELYAWDRATGGQRQATDRPNGTTDGTLSPDGEWIWWF 83

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVM 376
           SD +G E          G   +  +   E SY         G  +       +   + V+
Sbjct: 84  SDTDGDEFGTWVRQPFAGGPDEPATPGLEPSYPAGLAIGRDGTAVVGRSTDEDGSTVHVV 143

Query: 377 KKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRN 427
           +  G++  ++     +      S  G  +     + GD   S L  + L+G  
Sbjct: 144 RPGGAEPVVIYRHRESAGVGDLSRDGTLIAIEHTEHGDAMHSALRVVTLDGAT 196



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 80/258 (31%), Gaps = 20/258 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +    R   +  P ++ +    A    +      +Y  D       ++  +  +    
Sbjct: 12  PDWEKRFRAPRVGLPEWAEDAPDRALFVSNATGTFELYAWDRATGGQ-RQATDRPNGTTD 70

Query: 263 PRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNT--LFINISASYSPDSSQIVF 318
              S +G+        D       V         E  T           +   D + +V 
Sbjct: 71  GTLSPDGEWIWWFSDTDGDEFGTWVRQPFAGGPDEPATPGLEPSYPAGLAIGRDGTAVVG 130

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGV 375
            S  E    ++V++  G++   I + +E S      S  G LIA            A+ V
Sbjct: 131 RSTDEDGSTVHVVRPGGAEPVVIYRHRE-SAGVGDLSRDGTLIAIEHTEHGDAMHSALRV 189

Query: 376 MKKDGSQERLL------VEDSNLQAPTWSP---SGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +  DG+    L        +  L+   ++P     R LI   ++ G     ++ +    +
Sbjct: 190 VTLDGATVAELDDSEGGTRELGLEVLGFAPVAGDTRLLI-GHQRRGRWEPMVWDVTAGTQ 248

Query: 427 NETLINTPAYASDPQWVG 444
            +  I+ P   S  +W  
Sbjct: 249 EDLAIDLPGDVSA-EWYP 265



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 62/201 (30%), Gaps = 14/201 (6%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G    R         +    +++ V+   GA    +   R+        S +   +A 
Sbjct: 116 PAGLAIGRDGTAVVGRSTDEDGSTVHVVRPGGAEPVVIYRHRESAGVG-DLSRDGTLIAI 174

Query: 229 ATYDDEDILRVYLMDTRIDRAP----------KRIGNFRSMILAPRFSSNGKRALISVQK 278
              +  D +   L    +D A            R      +  AP   +   R LI  Q+
Sbjct: 175 EHTEHGDAMHSALRVVTLDGATVAELDDSEGGTRELGLEVLGFAPV--AGDTRLLIGHQR 232

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
               +    D+ +   E L   L  ++SA + PD S ++     E + +L+       + 
Sbjct: 233 RGRWEPMVWDVTAGTQEDLAIDLPGDVSAEWYPDGSALLIAHSFEARSELWRYDLAAREL 292

Query: 339 KRISQDKEASYFDPVWSPQGD 359
            R+      +       P G 
Sbjct: 293 VRVDT-PPGTVSGATARPDGT 312


>gi|332996054|gb|EGK15681.1| hypothetical protein SFVA6_4715 [Shigella flexneri VA-6]
 gi|332997854|gb|EGK17462.1| hypothetical protein SFK272_4559 [Shigella flexneri K-272]
 gi|333013649|gb|EGK33014.1| hypothetical protein SFK227_4465 [Shigella flexneri K-227]
          Length = 404

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIVCAHAQSGEVEYLTE 369

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 370 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 403



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     K   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 352 N----RIVCAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 403



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I+  +    
Sbjct: 305 RDDNGIVQLWLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIVCAHAQSG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 363 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 391


>gi|226313487|ref|YP_002773381.1| hypothetical protein BBR47_39000 [Brevibacillus brevis NBRC 100599]
 gi|226096435|dbj|BAH44877.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 635

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 88/227 (38%), Gaps = 23/227 (10%)

Query: 214 LFEPRFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +P  S     ++  YA +  E    V L +       + IG+  S    P+   +G+ 
Sbjct: 38  ASKPEISGAGYDISKKYAVWMVEGEETVTLYNLDKGTQTQ-IGDKESEKTNPKV--DGEY 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +    +D   D+Y  D+      RL++               + V  +D      +Y+ 
Sbjct: 95  VVWIDSRDGGSDVYLYDIAKQKETRLSDGSATVDGVEI---GDKNVVWTD---NGDVYLY 148

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDS 390
           + +  D + +S + +AS  +PV S     +A+         I        QE+  +V+  
Sbjct: 149 KISTGDTEVVSANGKAS--NPVVSD--AYVAWEDERDGNSDIYYYDIKAKQEKEAVVQKG 204

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAY 436
           +   PT S +   +++    +  + +++Y   + NGRN+ L N  + 
Sbjct: 205 DQGRPTLSTN--KILY----ENRSYNQIYVHTISNGRNKELTNGSSD 245



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 83/219 (37%), Gaps = 23/219 (10%)

Query: 227 AYATYDDED--ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           AY  ++DE      +Y  D +  +  + +   +     P  S+N  + L   +      I
Sbjct: 172 AYVAWEDERDGNSDIYYYDIKAKQEKEAVVQ-KGDQGRPTLSTN--KILY--ENRSYNQI 226

Query: 285 YSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           Y   + +   + LTN         +Y  D    V+    EG + +Y    + S +K+I  
Sbjct: 227 YVHTISNGRNKELTNGSSDKEFVHTYKDD---YVYA---EGNDLIYRT-VDKSSKKKIDS 279

Query: 344 DKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSG 401
           +   +    ++   GD I + K  S +K  + +   D  ++  L     +   P  +   
Sbjct: 280 NLSGNVGPKIY---GDYILYAKKDSNKKLQLHLYDLDDKEQVPLGNVGGDPIDP--AGHD 334

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           R + +  K   +    LY ++  G ++ +  +   A+ P
Sbjct: 335 RYVAYVSKSKNNNAIVLYDME-KGTSKAISGSGQDAARP 372


>gi|221134700|ref|ZP_03561003.1| Dipeptidyl peptidase IV [Glaciecola sp. HTCC2999]
          Length = 722

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 58/195 (29%), Gaps = 49/195 (25%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG------------------------- 254
           SP+ Q+V +      D  R  L +  I     R+                          
Sbjct: 33  SPDGQRVTFIRAKQTDTNRFDLWEYNIKEQRSRLLFDADDLHQGDENLSDEEKARRERMR 92

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              S I++ ++S++GK  L  +  D     +   L     +RL  T        +SP  +
Sbjct: 93  LSGSGIVSYKWSADGKALLFPLAGD----AFYYRLGDKKAQRLLATPEFETDIKFSPKGN 148

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS----------------YFDPVWSPQG 358
            I F  D    + + +M      +  I+     +                     WSP  
Sbjct: 149 YISFIRD----QNIVIMHIATGTETAITTSGGGNIKFGMAEFVAQEEMSRLTGYWWSPNE 204

Query: 359 DLIAFTKFSGEKFAI 373
             IAFT+       I
Sbjct: 205 AHIAFTRIDETPVDI 219



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 59/176 (33%), Gaps = 33/176 (18%)

Query: 265 FSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            S +G+R      K       D++  ++     +R                 S+++F++D
Sbjct: 32  LSPDGQRVTFIRAKQTDTNRFDLWEYNI---KEQR-----------------SRLLFDAD 71

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              +    +     + ++R+            WS  G  + F   +G+ F   +   D  
Sbjct: 72  DLHQGDENLSDEEKARRERMRLSGSGIVSYK-WSADGKALLF-PLAGDAFYYRL--GDKK 127

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            +RLL          +SP G  + F R ++      +  + +    ET I T    
Sbjct: 128 AQRLLATPEFETDIKFSPKGNYISFIRDQN------IVIMHIATGTETAITTSGGG 177



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 49/129 (37%), Gaps = 6/129 (4%)

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFA 372
            ++ S+R+G   LY+  ++G   K++++  +    D     + + + +     +   +  
Sbjct: 335 FIWRSERDGFSHLYLYANDGKLIKQLTK-GDYVVTDIAAHDEANGMLYISARKDTPLEAH 393

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +  +  + +    + +        +S    S+  +   D +T  +      +G   T ++
Sbjct: 394 LYALDINTTSMTRITQPGKFHTVQFSRD-ASIYANTFSDINTPPQTGLYRADGSFITWLD 452

Query: 433 TPA-YASDP 440
             A   S P
Sbjct: 453 ENAVDTSHP 461



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 49/308 (15%), Positives = 103/308 (33%), Gaps = 25/308 (8%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            +   G   ++     + V   +      ++ SP     IA T  D+    I      + 
Sbjct: 170 AITTSGGGNIKFGMAEF-VAQEEMSRLTGYWWSPNEAH-IAFTRIDETPVDIIKRSEIYA 227

Query: 175 SRILFVSESVVSGIIKN---SLCVMDRDGANIRYLTPSRDQILFEPR--FSPNQQKVAYA 229
            RI  + +        N    L V D + A    +   + + ++ PR  ++ N   ++Y 
Sbjct: 228 ERIAMIEQKYPKAGTPNVLVDLFVQDINQAKRVEVDLGKQEDIYLPRVKWTNNPDVLSYQ 287

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-----APRFSSNGKRALISVQKDEAMDI 284
               +         +   +A K +   RS           F       +   ++D    +
Sbjct: 288 VQSRDQQTLTLNTFSLSKQATKTLLTERSNTWVNLHNDLTFLKEQNAFIWRSERDGFSHL 347

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE---QLYVMQSNGSDQKRI 341
           Y         ++LT   ++    +   +++ +++ S R+       LY +  N +   RI
Sbjct: 348 YLYANDGKLIKQLTKGDYVVTDIAAHDEANGMLYISARKDTPLEAHLYALDINTTSMTRI 407

Query: 342 SQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPT 396
           +Q  +  +    +S    + A T          G+ + DGS    L    V+ S+   P 
Sbjct: 408 TQPGK--FHTVQFSRDASIYANTFSDINTPPQTGLYRADGSFITWLDENAVDTSHPLQPF 465

Query: 397 WSPSGRSL 404
           +   G  +
Sbjct: 466 Y---GNWV 470


>gi|251796760|ref|YP_003011491.1| hypothetical protein Pjdr2_2752 [Paenibacillus sp. JDR-2]
 gi|247544386|gb|ACT01405.1| WD40 domain protein beta Propeller [Paenibacillus sp. JDR-2]
          Length = 416

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 76/190 (40%), Gaps = 35/190 (18%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           I +P++S++G+     ++ +   +++S +  +    RL        +A ++P+ +++   
Sbjct: 60  IRSPQWSNDGRWMTF-LRDENRPEVWSYEAATGGIRRL----GEGANAKWAPNDNRLAIL 114

Query: 320 SDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFT-----KFSGE--KF 371
           S R     L VM ++  SD  +   +   +  +  W P G  +  +     +  G     
Sbjct: 115 SGRT----LSVMSADRPSDHSQ--DNIMDNAGEFSWLPDGSGLLVSTAAELRPEGGWAPI 168

Query: 372 AIGVMKKDGSQ--------ERLLVEDSNLQ----APT-WSPSGRSLIFSRKKDGDTGSK- 417
            + V+K +G+          RL  +  +      +P  WSP GR + F  K      S  
Sbjct: 169 ELYVLKPNGTTGVWSKQLFYRLPAQSDDFFAIQTSPFKWSPDGRWIAFIAKPTASLSSDA 228

Query: 418 --LYSIDLNG 425
             L  +  +G
Sbjct: 229 NTLILLSSDG 238



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 49/262 (18%), Positives = 102/262 (38%), Gaps = 41/262 (15%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           +++ +  P++S + + + +   ++   +  Y   T      +R+G   +     +++ N 
Sbjct: 56  KEEYIRSPQWSNDGRWMTFLRDENRPEVWSYEAATGG---IRRLGEGANA----KWAPND 108

Query: 270 KRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKE-- 326
            R  I       + + S D  S+ ++  + +        S+ PD S ++  +  E +   
Sbjct: 109 NRLAILS--GRTLSVMSADRPSDHSQDNIMDNAG---EFSWLPDGSGLLVSTAAELRPEG 163

Query: 327 -----QLYVMQSNGSD---QKRI-------SQDKEASYFDP-VWSPQGDLIAFT-----K 365
                +LYV++ NG+     K++       S D  A    P  WSP G  IAF       
Sbjct: 164 GWAPIELYVLKPNGTTGVWSKQLFYRLPAQSDDFFAIQTSPFKWSPDGRWIAFIAKPTAS 223

Query: 366 FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF--SRKKDGDTGSKLYSI- 421
            S +   + ++  DG       +         W+PS   L F     ++  +  KL  + 
Sbjct: 224 LSSDANTLILLSSDGQSFVKAGQMLRYADWFQWAPSSGQLAFIEGTGREATSNKKLTILE 283

Query: 422 DLNGRNETLINTPAYA-SDPQW 442
           D++   + ++    YA +D  W
Sbjct: 284 DISSLKKRVLTPQGYADNDFTW 305



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 34/176 (19%)

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           + LT   +I  S  +S D   + F  D E + +++  ++     +R+ +   A      W
Sbjct: 52  KPLTKEEYI-RSPQWSNDGRWMTFLRD-ENRPEVWSYEAATGGIRRLGEGANA-----KW 104

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS-----RK 409
           +P  + +A                D SQ+ ++         +W P G  L+ S     R 
Sbjct: 105 APNDNRLAILSGRTLSVMSADRPSDHSQDNIMDNAGEF---SWLPDGSGLLVSTAAELRP 161

Query: 410 KDGDTGSKLYSIDLNGR-----NETLINTPA--------------YASDPQWVGFM 446
           + G    +LY +  NG       +     PA              ++ D +W+ F+
Sbjct: 162 EGGWAPIELYVLKPNGTTGVWSKQLFYRLPAQSDDFFAIQTSPFKWSPDGRWIAFI 217


>gi|17232251|ref|NP_488799.1| WD repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17133896|dbj|BAB76458.1| WD-repeat protein [Nostoc sp. PCC 7120]
          Length = 589

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 19/214 (8%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + Q +  A+ D      + + +    +    +      + A   + +  + LIS   D+ 
Sbjct: 314 DGQTLVSASEDQ----TIKVWNLETAKVTTTLQGHTDTVRAIALTPD-DQTLISGSADKT 368

Query: 282 MDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + I+  +LQ    +R L++      S + S D   +V  +   G  Q++          R
Sbjct: 369 IKIW--NLQRLRIKRTLSSHAGGIWSLAISSDGQTLV-TAHENGSIQIW--NFPTGQLLR 423

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWS 398
             +  +   F    SP G+  A     G    I +      +    +      ++A  +S
Sbjct: 424 TIKGHQGRIFSVAMSPDGETFA---TGGIDKKIKIWNLYTGECLHTITEHQDTVRALVFS 480

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             G+ L  S     D   K++ +       TL+ 
Sbjct: 481 RDGKMLASSSW---DKSIKIWQMPTGKLLHTLLG 511



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 52/145 (35%), Gaps = 12/145 (8%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           +   G ++  I    +++V+     S+ + +     +          +F    SP+ +  
Sbjct: 385 SHAGGIWSLAISSDGQTLVTAHENGSIQIWNFPTGQLLRTIKGHQGRIFSVAMSPDGETF 444

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A    D +    + + +         I   +  + A  FS +GK    S   D+++ I+ 
Sbjct: 445 ATGGIDKK----IKIWNLYTGECLHTITEHQDTVRALVFSRDGKMLA-SSSWDKSIKIWQ 499

Query: 287 VD-------LQSNATERLTNTLFIN 304
           +        L  + +  +T  L I+
Sbjct: 500 MPTGKLLHTLLGHTSRVVTLNLGID 524



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 57/154 (37%), Gaps = 9/154 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++++SG    ++ + +     I+    S    ++    S + Q +  A  +      + +
Sbjct: 358 QTLISGSADKTIKIWNLQRLRIKRTLSSHAGGIWSLAISSDGQTLVTAHENG----SIQI 413

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
            +    +  + I   +  I +   S +G+    +   D+ + I+  +L +      +T  
Sbjct: 414 WNFPTGQLLRTIKGHQGRIFSVAMSPDGETFA-TGGIDKKIKIW--NLYTGECLHTITEH 470

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                +  +S D   +   S  +   +++ M + 
Sbjct: 471 QDTVRALVFSRDGKMLA-SSSWDKSIKIWQMPTG 503


>gi|296121518|ref|YP_003629296.1| hypothetical protein Plim_1263 [Planctomyces limnophilus DSM 3776]
 gi|296013858|gb|ADG67097.1| WD-40 repeat protein [Planctomyces limnophilus DSM 3776]
          Length = 377

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 73/198 (36%), Gaps = 9/198 (4%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   S      +  ++  +  S+ +   DG+ +        Q+     FSP+   +A  +
Sbjct: 43  GPAYSVAAHPHQPWIAVGLDKSILLTHLDGSKLHTWNWPAGQVRGL-AFSPDGSTLAAGS 101

Query: 231 YDDEDILRVYLMDTR--IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           Y    +L+V             K +   R  +L   +S +GK+ + +   DEA  ++ V+
Sbjct: 102 YQSVQLLKVNAGTDGNPTLEPLKTLPGHRGYVLDLAWSPDGKQLV-TACDDEATRVFLVE 160

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGK----EQLYVMQSNGSDQKRISQD 344
                   L +  F   S ++SP    +   +  E +     ++++ ++   +       
Sbjct: 161 TAQRQL-MLIDHGFPVTSVAWSPSGEWLATSAGDETRAFKAGEVFLREATTGEVLHKLTG 219

Query: 345 KEASYFDPVWSPQGDLIA 362
            E       ++PQ D + 
Sbjct: 220 FERPVLAIQFTPQSDFLI 237



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 16/156 (10%)

Query: 262 APRFS----SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            P +S     +     + + K     I    L  +               ++SPD S + 
Sbjct: 43  GPAYSVAAHPHQPWIAVGLDKS----ILLTHLDGSKLHTWNWPAGQVRGLAFSPDGSTLA 98

Query: 318 FESDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             S +    QL  + +       +              D  WSP G  +  T    E   
Sbjct: 99  AGSYQS--VQLLKVNAGTDGNPTLEPLKTLPGHRGYVLDLAWSPDGKQLV-TACDDEATR 155

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           + +++    Q  L+     + +  WSPSG  L  S 
Sbjct: 156 VFLVETAQRQLMLIDHGFPVTSVAWSPSGEWLATSA 191


>gi|281210978|gb|EFA85144.1| transcriptional repressor TUP1 [Polysphondylium pallidum PN500]
          Length = 546

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 58/387 (14%), Positives = 130/387 (33%), Gaps = 57/387 (14%)

Query: 56  VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD--WNSLGAQVL-- 111
             + +L  +  E +  D +R   F+ +  D   +    PD +  +      +L   +L  
Sbjct: 189 EPLGDLNQQHKEGIVNDDRR--RFSEMDMDENGKDKNGPDWLVGYNPNVQTNLNIDLLQT 246

Query: 112 -----VTGRVIKEGKDRLRVEF-----RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
                V   V      +          +++D ++ K++                    DD
Sbjct: 247 LTHNSVVCCVKFSNDGKYLATGCNRYAQIFDTENGKKLYN----------------FFDD 290

Query: 162 IYQSITGEKGDFNSRILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
                  ++GD   R +  S       +G    ++ V D     I+ +    +  ++   
Sbjct: 291 -----GEKEGDLYIRSVCFSPDGKYLATGAEDKTVKVWDIAQRKIQQVFTGHELDIYSLD 345

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----FRSMILAPRFSSNGKRALI 274
           FS + + +   + D +      + D +  +    +GN     ++ + +   S +G R + 
Sbjct: 346 FSYDGRFIVSGSGDKK----AKIWDLKEGKCAFTLGNEEVGPKNGVTSVAISPDG-RLVA 400

Query: 275 SVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQ 332
           +   D  + ++  D  S    ER    +    S ++SPD   +   S D+  K       
Sbjct: 401 AGSLDNIVRLW--DAHSGYFLERYEGHMDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGS 458

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            + S  +      +       +SP G+ +  +            K   +   L    +++
Sbjct: 459 RSRSRCRSTFNGHKDFVLSVAFSPCGNWLI-SGSKDRSVQFWDPKTGTTHMMLQGHKNSV 517

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +   SP G   +F+    GD  ++L+
Sbjct: 518 ISVALSPKGG--LFATG-SGDYRARLW 541



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 51/149 (34%), Gaps = 5/149 (3%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +G + N + + D                ++   FSP+ + +A  + D    L      
Sbjct: 399 VAAGSLDNIVRLWDAHSGYFLERYEGHMDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGS 458

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R        +  +L+  FS  G    IS  KD ++  +  D ++  T  +      
Sbjct: 459 RSRSRCRSTFNGHKDFVLSVAFSPCGNWL-ISGSKDRSVQFW--DPKTGTTHMMLQGHKN 515

Query: 304 NI-SASYSPDSSQIVFESDREGKEQLYVM 331
           ++ S + SP           + + +L+  
Sbjct: 516 SVISVALSPKGGLFA-TGSGDYRARLWKY 543


>gi|253571983|ref|ZP_04849388.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251838580|gb|EES66666.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 845

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 83/262 (31%), Gaps = 52/262 (19%)

Query: 218 RFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             SP+ + +   Y         R Y   T +      + N R  +    +     +   +
Sbjct: 212 SISPSGKYLLTRYWDNHAAKRSRTYCELTELKSGKVLLTNLRDGM---SWMPKSDKLYYT 268

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP----------------DS--SQIV 317
           V      D+ ++D  +   E +  ++    S  +SP                D    +IV
Sbjct: 269 VTALTGNDVITLDPATLREETILQSI-PEQSFRWSPNEDFLIYYPREEGVKEDGPLRRIV 327

Query: 318 FESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-------TKF 366
             +DR     G+  L          +R++     S +    SP G  + +       T+ 
Sbjct: 328 SPADRIPNSRGRSFLAKYNLADGVSERLTY-GNHSTYLQDISPDGKYMLYSTSKENITQR 386

Query: 367 SGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-------------- 411
                ++  +  +    + L  ED  +    +SP G+ L+ +   +              
Sbjct: 387 PFSLSSLYQVDLETLKVDTLFYEDRFIGGAGYSPDGKQLLLTGSPEAFGGIGKNCGNHPI 446

Query: 412 -GDTGSKLYSIDLNGRNETLIN 432
             D  ++ + +DL+ R    I 
Sbjct: 447 ANDFDTQAFIMDLSTRKIQPIT 468



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 81/257 (31%), Gaps = 50/257 (19%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            S  L+ + + ++G    +L     D A +R  T  +       R+SPN+  + Y   ++
Sbjct: 261 KSDKLYYTVTALTGNDVITL-----DPATLREETILQSIPEQSFRWSPNEDFLIYYPREE 315

Query: 234 E--------------------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                                            D   +R+            S +GK  L
Sbjct: 316 GVKEDGPLRRIVSPADRIPNSRGRSFLAKYNLADGVSERLTYGNHSTYLQDISPDGKYML 375

Query: 274 ISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--- 323
            S  K+           +Y VDL++   + L         A YSPD  Q++     E   
Sbjct: 376 YSTSKENITQRPFSLSSLYQVDLETLKVDTLFYEDRFIGGAGYSPDGKQLLLTGSPEAFG 435

Query: 324 --GKE------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             GK             Q ++M  +    + I++D   +     W+     I F    G+
Sbjct: 436 GIGKNCGNHPIANDFDTQAFIMDLSTRKIQPITKDFHPTVSPLQWNHGDGCIYFNTDDGD 495

Query: 370 KFAIGVMKK-DGSQERL 385
              I      DG  E+L
Sbjct: 496 CKNIYRYSPKDGKFEKL 512



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 46/228 (20%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISAS 308
             + +  ++   S +GK  L     + A           +L+S     LTN        S
Sbjct: 202 TVYGNRAISVSISPSGKYLLTRYWDNHAAKRSRTYCELTELKSGKV-LLTNLR---DGMS 257

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---- 364
           + P S ++ +         +  +      ++ I Q      F   WSP  D + +     
Sbjct: 258 WMPKSDKLYYTVTALTGNDVITLDPATLREETILQSIPEQSF--RWSPNEDFLIYYPREE 315

Query: 365 -------------------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                                 G  F       DG  ERL   + +      SP G+ ++
Sbjct: 316 GVKEDGPLRRIVSPADRIPNSRGRSFLAKYNLADGVSERLTYGNHSTYLQDISPDGKYML 375

Query: 406 FSRKKDGDTG-----SKLYSIDLNG-------RNETLINTPAYASDPQ 441
           +S  K+  T      S LY +DL           +  I    Y+ D +
Sbjct: 376 YSTSKENITQRPFSLSSLYQVDLETLKVDTLFYEDRFIGGAGYSPDGK 423


>gi|57525363|ref|NP_001006232.1| WD repeat-containing protein 51B [Gallus gallus]
 gi|53127748|emb|CAG31203.1| hypothetical protein RCJMB04_3d17 [Gallus gallus]
          Length = 468

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 95/264 (35%), Gaps = 20/264 (7%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI--RYLTPSRD 211
           +A  + D +        G   + + F + +          C+M          Y      
Sbjct: 1   MASALEDPVLIRPFRGHGAAVTGVGFSASAAELATSSLDRCLMIWKLKKQCRAYKFVGHS 60

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +    FSP  Q +A A+ D      V L    I      +    + + +  FS +G  
Sbjct: 61  DAVTSVNFSPEGQLLASASQDR----TVRLWIPCIHGESSVLKGHTASVRSVSFSHDG-H 115

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESDREGKEQ 327
            L+S   D+++ I+SV        RL  +LF +      A +SPD   I   S+ +   +
Sbjct: 116 LLVSASNDKSVKIWSV-----QRRRLLFSLFQHTHWVRCAKFSPDGRLIASCSE-DKSVK 169

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           ++   +       I  +   ++ D  ++P G  IA +  S     +  ++ +   +   V
Sbjct: 170 IWDTVNKTCIDSFIDYEGFPNFAD--FNPSGTCIA-SAGSNHTVKLWDIRMNKLLQHYKV 226

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKD 411
             + +   ++ PSG  LI +    
Sbjct: 227 HRAEVNCVSFHPSGNYLITASTDG 250


>gi|281603082|gb|ADA76066.1| putative Dipeptidyl aminopeptidases/acylaminoacyl-peptidase
           [Shigella flexneri 2002017]
          Length = 422

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 272 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 331

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 332 WLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIVCAHAQSGEVEYLTE 387

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 388 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 421



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     K   N   +  A  +  +G+     + 
Sbjct: 310 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVLD 369

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 370 N----RIVCAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 421



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I+  +    
Sbjct: 323 RDDNGIVQLWLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIVCAHAQSG 380

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 381 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 409


>gi|24114999|ref|NP_709509.1| hypothetical protein SF3774 [Shigella flexneri 2a str. 301]
 gi|30064999|ref|NP_839170.1| hypothetical protein S3996 [Shigella flexneri 2a str. 2457T]
 gi|24054252|gb|AAN45216.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30043260|gb|AAP18981.1| hypothetical protein S3996 [Shigella flexneri 2a str. 2457T]
          Length = 424

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 274 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 333

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 334 WLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIVCAHAQSGEVEYLTE 389

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 390 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 423



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     K   N   +  A  +  +G+     + 
Sbjct: 312 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVLD 371

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 372 N----RIVCAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 423



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I+  +    
Sbjct: 325 RDDNGIVQLWLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIVCAHAQSG 382

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 383 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 411


>gi|91791801|ref|YP_561452.1| transcriptional regulatory protein-like protein [Shewanella
           denitrificans OS217]
 gi|91713803|gb|ABE53729.1| transcriptional regulatory protein-like protein [Shewanella
           denitrificans OS217]
          Length = 762

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 73/455 (16%), Positives = 141/455 (30%), Gaps = 73/455 (16%)

Query: 40  TNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPR 99
               N S + IA      +  L     +VVS D     +   + Q +     T   SI +
Sbjct: 19  ITQNNQSQI-IAPKALAVLTYLAENQGKVVSHD----ALLENVWQGTVVSPNTLQRSIAQ 73

Query: 100 FQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL------------------WDVKDRKQIIG 141
            +   +LG    V   +    K    +E  +                   D     +   
Sbjct: 74  LR--KALGDDGKVQVYIKTHAKQGYSLECDVRWHDNIESPPLNAAQENIVDTPTMSETNA 131

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-- 199
                     +   H+   D  +S T       S++  +    + GII  +         
Sbjct: 132 LAMSEDNTQSKAQHHSHDKDQSKSATTTDNAKPSKLTVMPLFTLFGIIILAYIGYQYLMP 191

Query: 200 ------GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
                       L  + D   F   +SP+ Q V +  Y                +   ++
Sbjct: 192 QPPSKLSFGELRLLTTTDNKEFASIYSPDGQYVVFHRYSAVFCRNNIWAKNTKTQQETQL 251

Query: 254 GNFRSMILAPRFSSNGKRALI-----SVQKDEAMDIY-SVDLQSNATERLTNTLFINIS- 306
                   +  FS++G + +        + +     Y  + L  +   +   +  + +  
Sbjct: 252 TKDFDSYGSHSFSTDGNQLVFIQTGGCSKPEPDNQCYKLMSLDFHKALQAPQSAKVLVEC 311

Query: 307 -------ASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                    +  +    +F+  S+R    +  V  +  +D   I    E +     +SP+
Sbjct: 312 KNSEIKFPKWLNNDDIALFQKLSNRWKLTRYSVSANKTTDIYEI---DEGNLIYYDYSPE 368

Query: 358 GDLIAF-TKFSGEKFAIGVMKKDGSQERLLVED----------SNLQAPTWSPSGRSLIF 406
            +L+A  +     ++ I ++K DG   RL+  +               P +SP    LIF
Sbjct: 369 DELLAVISSHKDGQYYIEILKPDG---RLISSNRIEYPKEIAKFKRIYPNFSPLKEQLIF 425

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           S      TG +L+++  +G   T I+ P   S  Q
Sbjct: 426 S------TGRQLFTLSFDG-QVTNISLPLDQSMGQ 453



 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 96/244 (39%), Gaps = 35/244 (14%)

Query: 189 IKNSLCVMDRDGA-----NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            +  + ++  DG       I Y           P FSP ++++ ++T      L     D
Sbjct: 381 GQYYIEILKPDGRLISSNRIEYPKEIAKFKRIYPNFSPLKEQLIFST---GRQLFTLSFD 437

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            ++      +         P+F  +GKR L+ ++     DI S+ L      +LT++  +
Sbjct: 438 GQVTNISLPLDQSMGQ---PQFHPDGKRMLV-IKGHYDSDIVSLPLS-----QLTSSPLV 488

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +   + +   +  + +S  + +    +  S+ S  +R +  ++++       P G+LIA+
Sbjct: 489 SSQPNTAQIENAQIVQSSAQTQS---LTSSDYSVIERSTYGEDSAKLQ----PNGELIAY 541

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                 +  + +   DG   + L +   D+ +    W+  G+SL+       +    L  
Sbjct: 542 QSDRSGEEQLWI--TDGKSSQQLTDFPMDTYIYGMDWAADGQSLLV------NANDVLIQ 593

Query: 421 IDLN 424
           + L+
Sbjct: 594 VSLD 597


>gi|89096185|ref|ZP_01169078.1| hypothetical protein B14911_25850 [Bacillus sp. NRRL B-14911]
 gi|89089039|gb|EAR68147.1| hypothetical protein B14911_25850 [Bacillus sp. NRRL B-14911]
          Length = 403

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 13/130 (10%)

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           + VF   R+G     +  + G  + R+++  +AS  DP WS  G  IA+    GE+  + 
Sbjct: 27  KAVFI--RDGN----LWLAEGKKETRLTEGGQAS--DPKWSYDGRFIAYLSAEGEQRYLY 78

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           +     ++     +        WSP   ++ ++ +     G    +   NG  +   N  
Sbjct: 79  IYDLQKNRSYQPYKTIETYHFEWSPDANTIAYTSR-----GVLNITKTKNGIPKGFENVS 133

Query: 435 AYASDPQWVG 444
              SD  W  
Sbjct: 134 LGVSDFTWTP 143



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 96/265 (36%), Gaps = 39/265 (14%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDG-----ANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           I+F S  + S    N   V  RDG        +    +      +P++S + + +AY + 
Sbjct: 11  IIFASMPLSSQAEGNLKAVFIRDGNLWLAEGKKETRLTEGGQASDPKWSYDGRFIAYLSA 70

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           + E    +Y+ D + +R+ +      +      +S +      + +      +     ++
Sbjct: 71  EGEQRY-LYIYDLQKNRSYQPYKTIETYHFE--WSPDANTIAYTSRG----VLNITKTKN 123

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDRE------GKEQLYVMQSNGS-DQKRI--- 341
              +   N        +++PD    +  S  E      G  +L+ ++ + + + ++I   
Sbjct: 124 GIPKGFENVSLGVSDFTWTPDGKGFIASSQAELLPTGWGPVRLFKIKKDAALNAEKIKPF 183

Query: 342 ---------SQDKEASYFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLV 387
                        +A++F   WS     I+F       +S +   + V+   G++ + + 
Sbjct: 184 YTIKTDPDKLFAIDANHFK--WSTDDKWISFLGVPTASWSADSNTLIVLSAGGTRFQTIG 241

Query: 388 E-DSNLQAPTWSPSGRSLIFSRKKD 411
           +  +      WSP+   + +   + 
Sbjct: 242 KMLNQPDWFKWSPAENKIAYISGEG 266



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 72/228 (31%), Gaps = 38/228 (16%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +   R+         P++S +G+       + E   +Y  DLQ N + +      I
Sbjct: 38  LAEGKKETRLTEG-GQASDPKWSYDGRFIAYLSAEGEQRYLYIYDLQKNRSYQ--PYKTI 94

Query: 304 NISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +SPD++ I + S    +  L + ++     K           D  W+P G    
Sbjct: 95  ETYHFEWSPDANTIAYTS----RGVLNITKTKNGIPKGFENVSLG-VSDFTWTPDGKGFI 149

Query: 363 FTKFSG------EKFAIGVMKKDGS--------QERLLVEDS-----NLQAPTWSPSGRS 403
            +  +           +  +KKD +           +  +       +     WS   + 
Sbjct: 150 ASSQAELLPTGWGPVRLFKIKKDAALNAEKIKPFYTIKTDPDKLFAIDANHFKWSTDDKW 209

Query: 404 LIF----SRKKDGDTGSKLYSIDLNGRNETL---INTPAYASDPQWVG 444
           + F    +     D+ + +       R +T+   +N P +    +W  
Sbjct: 210 ISFLGVPTASWSADSNTLIVLSAGGTRFQTIGKMLNQPDWF---KWSP 254


>gi|332750509|gb|EGJ80918.1| hypothetical protein SFK671_4464 [Shigella flexneri K-671]
 gi|333013230|gb|EGK32603.1| hypothetical protein SFK304_4693 [Shigella flexneri K-304]
          Length = 410

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 260 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 319

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 320 WLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIVCAHAQSGEVEYLTE 375

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 376 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 409



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     K   N   +  A  +  +G+     + 
Sbjct: 298 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVLD 357

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 358 N----RIVCAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 409



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I+  +    
Sbjct: 311 RDDNGIVQLWLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIVCAHAQSG 368

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 369 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 397


>gi|313647696|gb|EFS12144.1| uncharacterized protein yidR [Shigella flexneri 2a str. 2457T]
 gi|332751740|gb|EGJ82138.1| hypothetical protein SF274771_4478 [Shigella flexneri 2747-71]
 gi|332764059|gb|EGJ94296.1| hypothetical protein SF293071_4370 [Shigella flexneri 2930-71]
          Length = 412

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 55/160 (34%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLT--NTLFI----NISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT  +        N+   +   +P  +QI F   D  G  QL
Sbjct: 262 SGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPRHWVRCNPQGTQIAFLMRDDNGIVQL 321

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +K        W P G+ + F   +     I        +   L E
Sbjct: 322 WLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIVCAHAQSGEVEYLTE 377

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 +  A  +SP G+ L +        G +L+  + +
Sbjct: 378 NHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 411



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +     K   N   +  A  +  +G+     + 
Sbjct: 300 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVLD 359

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +    EG  QL++ +++
Sbjct: 360 N----RIVCAHAQSGEVEYLTENHANPPSADAVVFSPDGQWLAW---MEGG-QLWITETD 411



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I+  +    
Sbjct: 313 RDDNGIVQLWLISPQGGEPRKLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIVCAHAQSG 370

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 371 EVEYLTENHANPPSAD-AVVFSPDGQWLAW 399


>gi|271967502|ref|YP_003341698.1| hypothetical protein Sros_6227 [Streptosporangium roseum DSM 43021]
 gi|270510677|gb|ACZ88955.1| WD40 repeat-domain-containing protein-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 943

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 76/207 (36%), Gaps = 13/207 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +A A  D     RV L D       + +    +   A  F+S+G+R  +    D
Sbjct: 337 SPDGEMLATARSDG----RVVLWDPAGRTRLRTLETGVNTPHAIAFTSDGRRLAVGG-AD 391

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            A+ ++ V         L+   + +   S +   + ++   D EG  ++ V    G+   
Sbjct: 392 GALSVWDV-RDGRRITTLSVDGYRSDIFSLAASGNFLLAAGDDEG--RVVVWDLEGNRPF 448

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQA 394
            + +    +     ++ + D++A     G           V  K  +   +  +      
Sbjct: 449 ALIKGHRGTVTGLAFNAKADMLASASADGTVKLWQPGETAVQSKATATLAVPGQSGRFTP 508

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            T+SP GR +      +   G+ ++ +
Sbjct: 509 VTFSPDGRFIAAGTYGNTIGGAVVWDV 535



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/374 (13%), Positives = 101/374 (27%), Gaps = 47/374 (12%)

Query: 76  SDVFNLI---SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLR-VEFRLW 131
           S  F  +       F    T  ++I     W+      + T RV+         V    +
Sbjct: 503 SGRFTPVTFSPDGRFIAAGTYGNTIGGAVVWD------VRTRRVVHRLNGHYTPVHALAF 556

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
                  +          +   +     +DI        G           ++       
Sbjct: 557 LGHSGGLLA----TGGADNRVLLWDLADEDIVDRYEAHTG--------PVTAIAPSKDSR 604

Query: 192 SLCVMDRDGANIRY-----LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           +L     DG  I +        +          +P+ +K+   +   E +L V  +    
Sbjct: 605 TLYTAAWDGNVILWDLLGSPVSTPGGAARAVAINPDGKKLI--SGGSEGVLSVVSLTDPE 662

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D    R+    ++      S    +  I+ +     +++  D   +   RL         
Sbjct: 663 DTEELRVPGGAAITRIVT-SRERDQIAIATRN----EVWLNDPAESTATRLPKAPARVAG 717

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPD   +       G   + +  +       I  D+   Y    +SP G ++A    
Sbjct: 718 LAFSPDGRSLA----AGGANGIVLWDTTTRKATSIGSDR-VLYDSVAFSPDGRILA---A 769

Query: 367 SGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 I +      +   +L    +      +SP G  L        D    L+ +   
Sbjct: 770 GAGDLDIWLWDTATGKLIGKLGGHFNTASGLAFSPHGDLLA---SAGLDGRIILWDVKTR 826

Query: 425 GRNETLINTPAYAS 438
                L   P  A 
Sbjct: 827 KAIHVLTGHPIGAG 840



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 88/263 (33%), Gaps = 47/263 (17%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF- 265
            P +        FSP+ + +A  TY +  I    + D R  R   R+    + + A  F 
Sbjct: 499 VPGQSGRFTPVTFSPDGRFIAAGTYGNT-IGGAVVWDVRTRRVVHRLNGHYTPVHALAFL 557

Query: 266 ----------SSNGKRALISVQKDEAMDIYSVD-------LQSNATERL-TNTLFINI-- 305
                      ++ +  L  +  ++ +D Y            S  +  L T     N+  
Sbjct: 558 GHSGGLLATGGADNRVLLWDLADEDIVDRYEAHTGPVTAIAPSKDSRTLYTAAWDGNVIL 617

Query: 306 -----SASYSPDSSQIVFESDREGKEQL---------YVMQSNGSDQKRISQDKEASYFD 351
                S   +P  +      + +GK+ +          V  ++  D + +     A+   
Sbjct: 618 WDLLGSPVSTPGGAARAVAINPDGKKLISGGSEGVLSVVSLTDPEDTEELRVPGGAAITR 677

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            V S + D IA    +     + +    + +  RL    + +    +SP GRSL      
Sbjct: 678 IVTSRERDQIAIATRN----EVWLNDPAESTATRLPKAPARVAGLAFSPDGRSLA----A 729

Query: 411 DGDTGSKLYSIDLNGRNETLINT 433
            G  G  L+  D   R  T I +
Sbjct: 730 GGANGIVLW--DTTTRKATSIGS 750


>gi|166368200|ref|YP_001660473.1| hypothetical protein MAE_54590 [Microcystis aeruginosa NIES-843]
 gi|166090573|dbj|BAG05281.1| hypothetical protein MAE_54590 [Microcystis aeruginosa NIES-843]
          Length = 109

 Score = 58.1 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 31/84 (36%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L            S D   IV+ S++ GK  +Y+        K I+++       P  S 
Sbjct: 11  LNQAKTYQDQPDISADGRYIVYVSEQSGKPDIYIYDRQTLQAKNITENILGEVRRPTISG 70

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDG 380
            G  IAF      ++ + +  + G
Sbjct: 71  NGRFIAFESNRFGQWNLEIFDRGG 94



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 6/92 (6%)

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRK 409
           P  S  G  I +      K  I +  +   Q + + E+    ++ PT S +GR + F   
Sbjct: 21  PDISADGRYIVYVSEQSGKPDIYIYDRQTLQAKNITENILGEVRRPTISGNGRFIAFESN 80

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           + G    +++    +   E   + P   S P 
Sbjct: 81  RFGQWNLEIF----DRGGEISPSLPPINSSPS 108



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 7/97 (7%)

Query: 252 RIGNFRSMILA------PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFIN 304
           R+     +  A      P  S++G+  +   ++    DIY  D Q+   + +T N L   
Sbjct: 4   RLVPLPGLNQAKTYQDQPDISADGRYIVYVSEQSGKPDIYIYDRQTLQAKNITENILGEV 63

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
              + S +   I FES+R G+  L +    G     +
Sbjct: 64  RRPTISGNGRFIAFESNRFGQWNLEIFDRGGEISPSL 100



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 32/93 (34%), Gaps = 4/93 (4%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +P  S + + + Y +        +Y+ D +  +A     N    +  P  S NG+     
Sbjct: 20  QPDISADGRYIVYVSEQSGKP-DIYIYDRQTLQAKNITENILGEVRRPTISGNGRFIAFE 78

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +    ++   D     +  L     IN S S
Sbjct: 79  SNRFGQWNLEIFDRGGEISPSL---PPINSSPS 108


>gi|333026378|ref|ZP_08454442.1| hypothetical protein STTU_3882 [Streptomyces sp. Tu6071]
 gi|332746230|gb|EGJ76671.1| hypothetical protein STTU_3882 [Streptomyces sp. Tu6071]
          Length = 1311

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 71/230 (30%), Gaps = 35/230 (15%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSS---NG 269
           L  PRFSP+   +A+ ++   D   ++L +   D   +++ ++         +S    +G
Sbjct: 64  LSHPRFSPDGAHLAFVSWRSLDP-EIHLAEVAGDTPVRQLTHWAGRDTRVCGWSPPDADG 122

Query: 270 KRALISVQKDEAM-----DIYSVDLQSNATERLTNTL-------FINISASYSPDSSQIV 317
           +  +++V             Y V    +    L             +       D   ++
Sbjct: 123 RSDILAVSSQGQPFSYFAWAYKVPTDGSPGGPLPWGPVAALAQRGHDG------DERTLL 176

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-----GDLIAFTKFSGEKFA 372
                  +   +  +  G    R+    E    D           GD +AF         
Sbjct: 177 LTGTPPHEPAAWK-RYRGGATGRLWLHGERLLADLDGHLDCPMFVGDRVAFLSDHEGVGN 235

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   + DGS  R   +     A   +  G  +++          +L+ +D
Sbjct: 236 VYSCRPDGSGLRRHTDHDAFYARNAASDGERIVY------QCAGELWLVD 279



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 22/198 (11%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISAS- 308
           +R+   R+ +  PRFS +G        +    +I+  ++       +LT+    +     
Sbjct: 55  RRLTADRTKLSHPRFSPDGAHLAFVSWRSLDPEIHLAEVAGDTPVRQLTHWAGRDTRVCG 114

Query: 309 YSP---DSSQIVFESDREGKEQ-----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +SP   D    +     +G+        Y + ++GS    +     A+            
Sbjct: 115 WSPPDADGRSDILAVSSQGQPFSYFAWAYKVPTDGSPGGPLPWGPVAALAQRGHDGDERT 174

Query: 361 IAFTKFSGEKFAIGVMKKDGS-------QERLLVE-DSNLQAPTWSPSGRSLIFSRKKDG 412
           +  T     + A     + G+        ERLL + D +L  P +   G  + F    +G
Sbjct: 175 LLLTGTPPHEPAAWKRYRGGATGRLWLHGERLLADLDGHLDCPMFV--GDRVAFLSDHEG 232

Query: 413 DTGSKLYSIDLNGRNETL 430
                +YS   +G     
Sbjct: 233 --VGNVYSCRPDGSGLRR 248



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 36/97 (37%), Gaps = 9/97 (9%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDP 352
             RLT          +SPD + + F S R    ++++ +  G +  ++++          
Sbjct: 54  ARRLTADRTKLSHPRFSPDGAHLAFVSWRSLDPEIHLAEVAGDTPVRQLTHWAGRDTRVC 113

Query: 353 VWSP---QGDL-IAFTKFSGEKFAI----GVMKKDGS 381
            WSP    G   I      G+ F+       +  DGS
Sbjct: 114 GWSPPDADGRSDILAVSSQGQPFSYFAWAYKVPTDGS 150



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 36/122 (29%), Gaps = 10/122 (8%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA----MDIYSVDLQSNATERL--TNTL 301
           R  + + +F   +    FS +G     S          + +  +  +      +  T+  
Sbjct: 525 RVVEVVRSFNGPVRDLAFSPDGAWLAWSHPGVGRSLRQIKLARISEREGPFSLIDVTDGR 584

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYV----MQSNGSDQKRISQDKEASYFDPVWSPQ 357
           F + +  ++ D   + F S R       V    +      +  +     A+      S  
Sbjct: 585 FEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPHLVTLSSATPSPFALSAD 644

Query: 358 GD 359
           G 
Sbjct: 645 GR 646



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 10/110 (9%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQERLL-VEDSNLQA- 394
           + +       D  +SP G  +A++      S  +  +  + +      L+ V D   +  
Sbjct: 529 VVRSFNGPVRDLAFSPDGAWLAWSHPGVGRSLRQIKLARISEREGPFSLIDVTDGRFEDE 588

Query: 395 -PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
            P ++  GR L F   +  D    +++ DL+   G    L+   +    P
Sbjct: 589 NPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPHLVTLSSATPSP 638



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 68/211 (32%), Gaps = 26/211 (12%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA----- 229
            R+ F+S+    G     +     DG+ +R      D        S + +++ Y      
Sbjct: 222 DRVAFLSDHEGVGN----VYSCRPDGSGLRR-HTDHDAFYARNAAS-DGERIVYQCAGEL 275

Query: 230 ----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEAMD 283
                   + + R   +     R+ +R     +         +  G+ + ++V+      
Sbjct: 276 WLVDDLAPDAVPRRLDIRLGGPRSGRRRHQVPAARHLDAVCPDETGRASAVAVRGS---- 331

Query: 284 IYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSN----GSDQ 338
           +Y +  +      L +T  + +           + + SD  G + + +            
Sbjct: 332 LYWLTHRDGPARTLADTPGVRVRMPVLYGGGGSVAYVSDAGGADGIEIAPLPRAGTPGPV 391

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +R +  +     + V SP+GD +A     G 
Sbjct: 392 RRWAHGRLGLVEELVASPKGDRLAVATHDGR 422



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 65/201 (32%), Gaps = 15/201 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-VYLMDTRIDRAP---KRIGNF 256
           A +  +  S +  + +  FSP+   +A++       LR + L        P     + + 
Sbjct: 524 ARVVEVVRSFNGPVRDLAFSPDGAWLAWSHPGVGRSLRQIKLARISEREGPFSLIDVTDG 583

Query: 257 RSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQ---SNATERLTNTLFINISASYSP 311
           R     P F+ +G+       +  D   D+++ DL          +T +       + S 
Sbjct: 584 RFEDENPVFTRDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPHLVTLSSATPSPFALSA 643

Query: 312 DSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKF- 366
           D           DR    +  V+        R++     +      SP  G  + + ++ 
Sbjct: 644 DGRPAAGGLDPDDRASGYEGVVIVEAEGLASRVTPFPVPASKYSSLSPVAGGGLVWLRWP 703

Query: 367 -SGEKFAIGVMKKDGSQERLL 386
            SG      V   D S    L
Sbjct: 704 ISGALGQTFVNPADTSSRPTL 724



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ- 441
            RL  + + L  P +SP G  L F   +  D    L  +  +     L +     +    
Sbjct: 55  RRLTADRTKLSHPRFSPDGAHLAFVSWRSLDPEIHLAEVAGDTPVRQLTHWAGRDTRVCG 114

Query: 442 WVG 444
           W  
Sbjct: 115 WSP 117


>gi|172054944|ref|YP_001806271.1| WD40-like beta-propeller protein [Cyanothece sp. ATCC 51142]
 gi|171701225|gb|ACB54205.1| WD40-like beta-propeller protein [Cyanothece sp. ATCC 51142]
          Length = 362

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 64/212 (30%), Gaps = 23/212 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +    S  + +    +SP+      A       + ++     I   P  + +   +   
Sbjct: 13  QQQWQGSLSEYITAVAWSPDG---LLAASSAAGEVVIWQDSNLISLLPADVTSIDCL--- 66

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---------LTNTLFINISASYSPDS 313
             FSS+GK    +  +D  + I+S+       +R         L N        ++SP  
Sbjct: 67  -AFSSDGKFLA-AGGQDGKVRIWSMTSPKIRGKREISPDFIASLDNAPSWVDKLAWSPTC 124

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           + + F   R     + +  ++            +S  D  W P GD IA          +
Sbjct: 125 NHLAFSLGR----YVQIWDADSQTVITTLPFANSSVLDLAWRPNGDNIAIA--GNGGIKV 178

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                      L+   S      WS   + + 
Sbjct: 179 WSTTDWDDDPYLIDMPSASIVTAWSGDSKYIA 210



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 78/200 (39%), Gaps = 22/200 (11%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPD 312
           G+    I A  +S +G   L +      + I+     SN    L      I+  A +S D
Sbjct: 18  GSLSEYITAVAWSPDG--LLAASSAAGEVVIWQ---DSNLISLLPADVTSIDCLA-FSSD 71

Query: 313 SSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDP-------VWSPQGDLIAFT 364
              +     ++GK +++ M S     ++ IS D  AS  +         WSP  + +AF+
Sbjct: 72  GKFLA-AGGQDGKVRIWSMTSPKIRGKREISPDFIASLDNAPSWVDKLAWSPTCNHLAFS 130

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              G    I           L   +S++    W P+G ++  +    G+ G K++S    
Sbjct: 131 L--GRYVQIWDADSQTVITTLPFANSSVLDLAWRPNGDNIAIA----GNGGIKVWSTTDW 184

Query: 425 GRNETLINTPAYASDPQWVG 444
             +  LI+ P+ +    W G
Sbjct: 185 DDDPYLIDMPSASIVTAWSG 204



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 79/278 (28%), Gaps = 25/278 (8%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           IS D   S+       +      + + ++  +   + + D D   +    P  +  + + 
Sbjct: 100 ISPDFIASLDNAPSWVDKLAWSPTCNHLAFSLGRYVQIWDADSQTVITTLPFANSSVLDL 159

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---- 273
            + PN   +A A     +        T  D  P  I +  S  +   +S + K       
Sbjct: 160 AWRPNGDNIAIA----GNGGIKVWSTTDWDDDPYLI-DMPSASIVTAWSGDSKYIASANL 214

Query: 274 ---ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
              I+V +  +   + +         LT       S   S ++  +   S  +       
Sbjct: 215 DNTITVLEYGSPHPWIMRGFPGKISNLT------WSQPLSNNTPLLAASSMEDIVVWKKE 268

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
              N     R+    +       + P   L+A +        +    K   Q      + 
Sbjct: 269 TDDNDGWNARVLTIHDGKIQQLAFHPHSLLLA-SAADDGWLCLWTKAKQVGQILERAMNG 327

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                 WS  G+ L       G    +L     + R +
Sbjct: 328 LSCV-AWSQDGKQLA-----AGGQNGELIIFSESKRGK 359


>gi|153871597|ref|ZP_02000729.1| WD-40 repeat protein [Beggiatoa sp. PS]
 gi|152071938|gb|EDN69272.1| WD-40 repeat protein [Beggiatoa sp. PS]
          Length = 173

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 60/171 (35%), Gaps = 11/171 (6%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  + ++       +    FSP+ + +A + +D      + L + +     K +      
Sbjct: 8   GKVLHFIKDGHHNSVNSVAFSPDGELLASSDFDG----IINLWEVKTANRLKTLKGHSDT 63

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +L+  FS +G +   S   D+ + ++ V  +    + +        S ++ PD   +   
Sbjct: 64  VLSVIFSPDGTQLA-SSSYDKTLKLWEVS-RGKVFQTILGHRDAITSIAFHPDGQILASG 121

Query: 320 S-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S DR     L + +          +  +       +SP G LIA       
Sbjct: 122 SFDRT----LKLWEIKSGKLLSTFKSHQDYINTVTFSPTGSLIASASGDNT 168



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 47/137 (34%), Gaps = 15/137 (10%)

Query: 193 LCVMDRDG---------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           L   D DG         AN           +    FSP+  ++A ++YD      + L +
Sbjct: 34  LASSDFDGIINLWEVKTANRLKTLKGHSDTVLSVIFSPDGTQLASSSYDK----TLKLWE 89

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +  + I   R  I +  F  +G + L S   D  + ++ +           +    
Sbjct: 90  VSRGKVFQTILGHRDAITSIAFHPDG-QILASGSFDRTLKLWEI-KSGKLLSTFKSHQDY 147

Query: 304 NISASYSPDSSQIVFES 320
             + ++SP  S I   S
Sbjct: 148 INTVTFSPTGSLIASAS 164



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 4/92 (4%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           I      S     +SP G+L+A + F G    +  +K     + L      + +  +SP 
Sbjct: 14  IKDGHHNSVNSVAFSPDGELLASSDFDG-IINLWEVKTANRLKTLKGHSDTVLSVIFSPD 72

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           G  L  S     D   KL+ +      +T++ 
Sbjct: 73  GTQLASSSY---DKTLKLWEVSRGKVFQTILG 101


>gi|75910878|ref|YP_325174.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75704603|gb|ABA24279.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 443

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 101/308 (32%), Gaps = 44/308 (14%)

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           +   V   G D      +LW+    ++I    +  +  SW   A T S+D  Q +    G
Sbjct: 173 ILASVSSGGWDS---NIKLWEALTGREI----YSLTGHSWSVYAITFSND-GQILASGGG 224

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           D N ++  V                   G  IR LT      ++   FS N+  +A  + 
Sbjct: 225 DGNIKLWEVVS-----------------GQEIRTLT-GHSWAIYAVTFSSNRVVLASGSG 266

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D      + L D    +    +      I +  FS+N      S   D+ + ++  DL++
Sbjct: 267 DK----TIKLWDLATGQEISTLTGHAESINSLAFSNNELTLA-SGSVDKTIKLW--DLET 319

Query: 292 NATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 LT       S   S D   +   S     + + +       +         S  
Sbjct: 320 GKEIYTLTGHSGTVNSICLSNDGQILASGSV---DKTIKLWDLETGKEICTLIGHLESIE 376

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               S  G ++A      +   I  M   G +   L   S++ +  +SP G  L      
Sbjct: 377 SVTISSDGQILASASVD-KTVKIWEM-ATGKEVFTLSHSSSVNSIAFSPDGNLLA----- 429

Query: 411 DGDTGSKL 418
            GD+G  +
Sbjct: 430 AGDSGGNI 437



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 90/268 (33%), Gaps = 20/268 (7%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  SV SG   +++ + +       Y        ++   FS + Q +A           +
Sbjct: 173 ILASVSSGGWDSNIKLWEALTGREIYSLTGHSWSVYAITFSNDGQILA----SGGGDGNI 228

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLT 298
            L +    +  + +      I A  FSSN +  L S   D+ + ++  DL +      LT
Sbjct: 229 KLWEVVSGQEIRTLTGHSWAIYAVTFSSN-RVVLASGSGDKTIKLW--DLATGQEISTLT 285

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  S ++S +   +   S     + + +       +         +      S  G
Sbjct: 286 GHAESINSLAFSNNELTLASGSV---DKTIKLWDLETGKEIYTLTGHSGTVNSICLSNDG 342

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            ++A          I +   +  +E   L+    ++++ T S  G+ L  +     D   
Sbjct: 343 QILASGSVDKT---IKLWDLETGKEICTLIGHLESIESVTISSDGQILASASV---DKTV 396

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVG 444
           K++ +   G+    ++  +  +   +  
Sbjct: 397 KIWEM-ATGKEVFTLSHSSSVNSIAFSP 423


>gi|29347248|ref|NP_810751.1| putative alanyl dipeptidyl peptidase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29339147|gb|AAO76945.1| putative alanyl dipeptidyl peptidase [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 840

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 83/262 (31%), Gaps = 52/262 (19%)

Query: 218 RFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             SP+ + +   Y         R Y   T +      + N R  +    +     +   +
Sbjct: 207 SISPSGKYLLTRYWDNHAAKRSRTYCELTELKSGKVLLTNLRDGM---SWMPKSDKLYYT 263

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP----------------DS--SQIV 317
           V      D+ ++D  +   E +  ++    S  +SP                D    +IV
Sbjct: 264 VTALTGNDVITLDPATLREETILQSI-PEQSFRWSPNEDFLIYYPREEGVKEDGPLRRIV 322

Query: 318 FESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-------TKF 366
             +DR     G+  L          +R++     S +    SP G  + +       T+ 
Sbjct: 323 SPADRIPNSRGRSFLAKYNLADGISERLTY-GNHSTYLQDISPDGKYMLYSTSKENITQR 381

Query: 367 SGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-------------- 411
                ++  +  +    + L  ED  +    +SP G+ L+ +   +              
Sbjct: 382 PFSLSSLYQVDLETLKVDTLFYEDRFVGGAGYSPDGKQLLLTGSPEAFGGIGKNCGNHPI 441

Query: 412 -GDTGSKLYSIDLNGRNETLIN 432
             D  ++ + +DL+ R    I 
Sbjct: 442 ANDFDTQAFIMDLSTRKIQPIT 463



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 48/257 (18%), Positives = 81/257 (31%), Gaps = 50/257 (19%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            S  L+ + + ++G    +L     D A +R  T  +       R+SPN+  + Y   ++
Sbjct: 256 KSDKLYYTVTALTGNDVITL-----DPATLREETILQSIPEQSFRWSPNEDFLIYYPREE 310

Query: 234 E--------------------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                                            D   +R+            S +GK  L
Sbjct: 311 GVKEDGPLRRIVSPADRIPNSRGRSFLAKYNLADGISERLTYGNHSTYLQDISPDGKYML 370

Query: 274 ISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--- 323
            S  K+           +Y VDL++   + L         A YSPD  Q++     E   
Sbjct: 371 YSTSKENITQRPFSLSSLYQVDLETLKVDTLFYEDRFVGGAGYSPDGKQLLLTGSPEAFG 430

Query: 324 --GKE------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             GK             Q ++M  +    + I++D   +     W+     I F    G+
Sbjct: 431 GIGKNCGNHPIANDFDTQAFIMDLSTRKIQPITKDFNPTVSPLQWNHGDGCIYFNTDDGD 490

Query: 370 KFAIGVMKK-DGSQERL 385
              I      DG  E+L
Sbjct: 491 CKNIYRYSPKDGKFEKL 507



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 70/228 (30%), Gaps = 46/228 (20%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISAS 308
             + +  +A   S +GK  L     + A           +L+S     LTN        S
Sbjct: 197 TVYGNRAIAVSISPSGKYLLTRYWDNHAAKRSRTYCELTELKSGKV-LLTNLR---DGMS 252

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-- 366
           + P S ++ +         +  +      ++ I Q      F   WSP  D + +     
Sbjct: 253 WMPKSDKLYYTVTALTGNDVITLDPATLREETILQSIPEQSF--RWSPNEDFLIYYPREE 310

Query: 367 ---------------------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                                 G  F       DG  ERL   + +      SP G+ ++
Sbjct: 311 GVKEDGPLRRIVSPADRIPNSRGRSFLAKYNLADGISERLTYGNHSTYLQDISPDGKYML 370

Query: 406 FSRKKDGDTG-----SKLYSIDLNG-------RNETLINTPAYASDPQ 441
           +S  K+  T      S LY +DL           +  +    Y+ D +
Sbjct: 371 YSTSKENITQRPFSLSSLYQVDLETLKVDTLFYEDRFVGGAGYSPDGK 418


>gi|328469930|gb|EGF40841.1| Oligogalacturonide lyase [Vibrio parahaemolyticus 10329]
          Length = 388

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 67/191 (35%), Gaps = 28/191 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG+N+R +    +        + P+   +AY +
Sbjct: 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-------------LISV 276
           Y      R +Y  +       + +       L   F  +G                  S 
Sbjct: 257 YFKGQTDRVIYKTNPETLENEEVMVMPPCSHLMSNF--DGSLMVGDGCDAPVDVADADSY 314

Query: 277 QKDEAMDIYSVDLQSNATERL----TNTLFINIS-------ASYSPDSSQIVFESDREGK 325
             +    +Y ++ ++ + ++L    T+   ++          S++P+   ++F SD EG 
Sbjct: 315 NIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGV 374

Query: 326 EQLYVMQSNGS 336
             +Y+     S
Sbjct: 375 PAIYIADVPES 385



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 90/261 (34%), Gaps = 39/261 (14%)

Query: 196 MDRDGANIRYLTPSRDQIL-----FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           +D D           D I      ++  F+ + +K+ +A  D +     YL++    +A 
Sbjct: 15  VDSDTQVKVTRLTPTDVICHRNYFYQKCFTQDGKKLLFAG-DFDGNRNYYLLNLETQQAV 73

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASY 309
           +              S++ +RA   V+ +  +++  VDL++   + + T         ++
Sbjct: 74  QLTEGKGDNTFGGFISTD-ERAFFYVKNE--LNLMKVDLETLEEQVIYTVDEEWKGYGTW 130

Query: 310 --SPDSSQIV-----------------FESDREGKE--QLYVMQSNGSDQKRISQDKEAS 348
             + D +++V                 F          +L  +     + + I QD  A 
Sbjct: 131 VANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDT-AW 189

Query: 349 YFDPVWSP-QGDLIAFTKFSGEKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSG 401
              P++ P     + F            + ++ +DGS  R +    E  +     W P G
Sbjct: 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDG 249

Query: 402 RSLIFSRKKDGDTGSKLYSID 422
            ++ +     G T   +Y  +
Sbjct: 250 SAMAYVSYFKGQTDRVIYKTN 270



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 66/192 (34%), Gaps = 28/192 (14%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDRE 323
           F+ +GK+ L +   D   + Y ++L++    +LT     N    + S D     +  +  
Sbjct: 43  FTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNEL 102

Query: 324 GKEQLYVMQSNGSDQKRIS-----QDKEASYFDPV--------------WSPQGDLIAFT 364
               L  +     +++ I           ++                  W P      F 
Sbjct: 103 ---NLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFA 159

Query: 365 KFSGEKFAIGVMKKD--GSQERLLVEDSNL-QAPTWSP-SGRSLIFSRKKDGDT-GSKLY 419
           +F        ++K D    +  ++ +D+     P + P    ++ F  +   D   ++++
Sbjct: 160 EFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMW 219

Query: 420 SIDLNGRNETLI 431
            ++ +G N   I
Sbjct: 220 LVNEDGSNVRKI 231



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/238 (10%), Positives = 68/238 (28%), Gaps = 37/238 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           + P      +A +   +     +         + I    + +  P +   +        +
Sbjct: 149 WQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ V+   +   ++             + PD S + + S  +G+    +Y 
Sbjct: 209 GPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK 268

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMK 377
                 + + +      S+    +   G L+              + + I       V+ 
Sbjct: 269 TNPETLENEEVMVMPPCSHLMSNF--DGSLMVGDGCDAPVDVADADSYNIENDPFLYVLN 326

Query: 378 KDGSQERLLVEDSNLQ------------APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 + L + S                P+++P+   ++F+   +G     +Y  D+
Sbjct: 327 TKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG--VPAIYIADV 382


>gi|300866692|ref|ZP_07111376.1| putative WD-40 repeat [Oscillatoria sp. PCC 6506]
 gi|300335292|emb|CBN56536.1| putative WD-40 repeat [Oscillatoria sp. PCC 6506]
          Length = 840

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 75/257 (29%), Gaps = 52/257 (20%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
              P     +F    SP+ + +A           + L +         +      + +  
Sbjct: 551 RTLPGSKNPVFSVSISPDGKTLA-----ASGKQEIKLWNLETGEILNTLSGHEGNVWSVA 605

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQ-------- 315
            S +G+   +S   D +  ++  D+ +    R L++T     +  +S DS          
Sbjct: 606 ISPDGQTL-MSGSGDGSAILW--DISTGEIRRNLSHTGGWINAVGFSSDSKTAISCSHNK 662

Query: 316 ----------------------------IVFESDREGKEQLYVMQSNGSDQK---RISQD 344
                                        VF S   G  ++ +        +    +   
Sbjct: 663 GINLWDVTTGKLLYSLDGFNPMAIASQGRVFASS-GGPSEIKLWDVVTGALRSTLAVPAV 721

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                     S  G  +A       +  +  ++K  +   L    + ++A   SP G++L
Sbjct: 722 AGGGIKAIAISRDGWTLAHAMSGNSRIQVWDLRKRQALYTLDGHSAGVEAIAISPDGQTL 781

Query: 405 IFSRKKDGDTGSKLYSI 421
             S     D   KL+++
Sbjct: 782 ASSSS---DRTLKLWNL 795



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 44/137 (32%), Gaps = 15/137 (10%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S SPD   +       GK+++ +      +        E + +    SP G  +     S
Sbjct: 564 SISPDGKTLA----ASGKQEIKLWNLETGEILNTLSGHEGNVWSVAISPDGQTLM--SGS 617

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDG------DTGSKLYS 420
           G+  AI      G   R L           +S   ++ I      G       TG  LYS
Sbjct: 618 GDGSAILWDISTGEIRRNLSHTGGWINAVGFSSDSKTAISCSHNKGINLWDVTTGKLLYS 677

Query: 421 IDLNGRNETLINTPAYA 437
             L+G N   I +    
Sbjct: 678 --LDGFNPMAIASQGRV 692



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 84/304 (27%), Gaps = 53/304 (17%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           I+  + +++ G K    S  +      ++   K  + + + +   I       +  ++  
Sbjct: 545 IAPKLVRTLPGSKNPVFSVSISPDGKTLAASGKQEIKLWNLETGEILNTLSGHEGNVWSV 604

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK------- 270
             SP+ Q +              L D       + + +    I A  FSS+ K       
Sbjct: 605 AISPDGQTL----MSGSGDGSAILWDISTGEIRRNLSHTGGWINAVGFSSDSKTAISCSH 660

Query: 271 ------------RALISV----------------QKDEAMDIYSVDLQSNATERLTNTLF 302
                       + L S+                      +I   D+ + A         
Sbjct: 661 NKGINLWDVTTGKLLYSLDGFNPMAIASQGRVFASSGGPSEIKLWDVVTGALRSTLAVPA 720

Query: 303 INISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +        + S D   +       G  ++ V                A       SP G
Sbjct: 721 VAGGGIKAIAISRDGWTLAHA--MSGNSRIQVWDLRKRQALYTLDGHSAGVEAIAISPDG 778

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +A +  S     +  ++      +L+     + A  +S  G+ L+       D   ++
Sbjct: 779 QTLA-SSSSDRTLKLWNLRTG----KLMHSMEGMGAIAFSRDGQILV---SVGKDNSIQI 830

Query: 419 YSID 422
           + + 
Sbjct: 831 WQMS 834



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 76/203 (37%), Gaps = 34/203 (16%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           LWDV   K +     F+           ++      +    G  +   L+    VV+G +
Sbjct: 666 LWDVTTGKLLYSLDGFNP----------MAIASQGRVFASSGGPSEIKLW---DVVTGAL 712

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +++L V    G  I+ +  SRD        S N               R+ + D R  +A
Sbjct: 713 RSTLAVPAVAGGGIKAIAISRDGWTLAHAMSGNS--------------RIQVWDLRKRQA 758

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              +    + + A   S +G+    S   D  + ++  +L++    +L +++    + ++
Sbjct: 759 LYTLDGHSAGVEAIAISPDGQTLA-SSSSDRTLKLW--NLRTG---KLMHSMEGMGAIAF 812

Query: 310 SPDSSQIVFESDREGKEQLYVMQ 332
           S D   +V    ++   Q++ M 
Sbjct: 813 SRDGQILV-SVGKDNSIQIWQMS 834


>gi|198274397|ref|ZP_03206929.1| hypothetical protein BACPLE_00542 [Bacteroides plebeius DSM 17135]
 gi|198272763|gb|EDY97032.1| hypothetical protein BACPLE_00542 [Bacteroides plebeius DSM 17135]
          Length = 754

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 64/210 (30%), Gaps = 46/210 (21%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           RF  +GK    S++ +  +D  ++  +      +            SPD     F     
Sbjct: 126 RFQLDGKFWAYSIKNNRLLDEGAIPPRGKERHWMEVDDEKEGRPVTSPDGKWTAFIK--- 182

Query: 324 GKEQLYVMQSNGSDQKRISQDK---EASYFDPVWSPQGDLIAFTKFSG--EKFAIGV--- 375
             + +YV +     +K++SQD            WSP    +   +     +++   V   
Sbjct: 183 -NDNVYVREVATGKEKQLSQDGTLSNYYSSYIQWSPDSKSVVSCRIRPVEKRYVYYVESS 241

Query: 376 -------------MKKDGSQER--------------------LLVEDSNLQAPTWSPSGR 402
                          K G + R                    L      L  P W+   +
Sbjct: 242 PADQAQPKLHKQEYAKPGDELRFKVPCIFEVESGRRLIPSTELFSHQYELSGPMWNADSK 301

Query: 403 SLIFSRKKDGDTGSKLYSID-LNGRNETLI 431
           ++ F   + G    ++  +  ++G   TLI
Sbjct: 302 AITFEYNERGHKVYRVLEMSAVDGSVRTLI 331



 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 78/218 (35%), Gaps = 26/218 (11%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--SMILAPR-- 264
           S    L  P ++ + + + +   +    +   L  + +D + + +   +    +  PR  
Sbjct: 286 SHQYELSGPMWNADSKAITFEYNERGHKVYRVLEMSAVDGSVRTLIEEKEEKYVNYPRIY 345

Query: 265 --FSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESD 321
             + S+GKR + S ++D    +Y  D  +     ++T   +      +  + +++++ S 
Sbjct: 346 RNYLSDGKRIIWSSERDNYNHLYLYDRATGKPLNQITKGEWYVRGVQHVDEVNEVIYFSA 405

Query: 322 REGKE-------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              K+         Y +  +GS+   ++   E       +S     +       ++  I 
Sbjct: 406 NGMKKGEDPYLIHYYKINFDGSNLVELTP--EEGMHQCWYSSDYKYLVDVYSKVDQAPIA 463

Query: 375 V----------MKKDGSQERLLVEDSNLQAPTWSPSGR 402
           V          M+ D +    L+ +       +S  GR
Sbjct: 464 VLRDAKNGKIRMQLDKADISALLANGWKAPEVFSAKGR 501



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/174 (12%), Positives = 55/174 (31%), Gaps = 19/174 (10%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLT-------- 298
               + + +  +  P ++++ K       +       +  +     +   L         
Sbjct: 280 PSTELFSHQYELSGPMWNADSKAITFEYNERGHKVYRVLEMSAVDGSVRTLIEEKEEKYV 339

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQ 357
           N   I    +Y  D  +I++ S+R+    LY+   + G    +I++ +            
Sbjct: 340 NYPRIYR--NYLSDGKRIIWSSERDNYNHLYLYDRATGKPLNQITKGEWYVRGVQHVDEV 397

Query: 358 GDLIAFTKF------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            ++I F+                 +  DGS    L  +  +    +S   + L+
Sbjct: 398 NEVIYFSANGMKKGEDPYLIHYYKINFDGSNLVELTPEEGMHQCWYSSDYKYLV 451


>gi|190345162|gb|EDK36998.2| hypothetical protein PGUG_01096 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 569

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 27/195 (13%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPD 312
            N    I +  FS +GK    +  +D+ + I+  DL +    ++      +  S  + PD
Sbjct: 302 SNGDLYIRSVCFSPDGKLLA-TGTEDKLIRIW--DLTTKRIIKILRGHEQDIYSLDFFPD 358

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +++V  S   G   + +     S    ++   E        SP G LIA          
Sbjct: 359 GNRLVSGS---GDRTVRIWDLRSSQCS-LTLSIEDGVTTVAVSPDGQLIAAGSLD---HT 411

Query: 373 IGVMKKDGSQERLLVEDS---------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           + V           ++           ++ +  +S  G+ +        D   KL+  +L
Sbjct: 412 VRVWDSTTGFLVERLDSGIENGNGHKDSVYSVVFSNDGKQIA---SGALDRTIKLW--NL 466

Query: 424 NGRNETLINTPAYAS 438
            G+ E  +N+P    
Sbjct: 467 EGKQE--MNSPGGKR 479



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 67/202 (33%), Gaps = 24/202 (11%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV--- 185
           ++++V    +++ K    + +   +     ++D     T   GD   R +  S       
Sbjct: 263 QVFNVATG-ELVAKLVDDNTSGHEENGENDANDSTVQSTNSNGDLYIRSVCFSPDGKLLA 321

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + + D     I  +    +Q ++   F P+  ++   + D      V + D R
Sbjct: 322 TGTEDKLIRIWDLTTKRIIKILRGHEQDIYSLDFFPDGNRLVSGSGDR----TVRIWDLR 377

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFIN 304
             +    +      +     S +G+    +   D  + ++  D  +    ERL     I 
Sbjct: 378 SSQCSLTLSIEDG-VTTVAVSPDGQLIA-AGSLDHTVRVW--DSTTGFLVERL--DSGIE 431

Query: 305 ---------ISASYSPDSSQIV 317
                     S  +S D  QI 
Sbjct: 432 NGNGHKDSVYSVVFSNDGKQIA 453


>gi|146423584|ref|XP_001487719.1| hypothetical protein PGUG_01096 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 569

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 27/195 (13%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPD 312
            N    I +  FS +GK    +  +D+ + I+  DL +    ++      +  S  + PD
Sbjct: 302 SNGDLYIRSVCFSPDGKLLA-TGTEDKLIRIW--DLTTKRIIKILRGHEQDIYSLDFFPD 358

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +++V  S   G   + +     S    ++   E        SP G LIA          
Sbjct: 359 GNRLVSGS---GDRTVRIWDLRSSQCS-LTLSIEDGVTTVAVSPDGQLIAAGSLD---HT 411

Query: 373 IGVMKKDGSQERLLVEDS---------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           + V           ++           ++ +  +S  G+ +        D   KL+  +L
Sbjct: 412 VRVWDSTTGFLVERLDSGIENGNGHKDSVYSVVFSNDGKQIA---SGALDRTIKLW--NL 466

Query: 424 NGRNETLINTPAYAS 438
            G+ E  +N+P    
Sbjct: 467 EGKQE--MNSPGGKR 479



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 67/202 (33%), Gaps = 24/202 (11%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV--- 185
           ++++V    +++ K    + +   +     ++D     T   GD   R +  S       
Sbjct: 263 QVFNVATG-ELVAKLVDDNTSGHEENGENDANDSTVQSTNSNGDLYIRSVCFSPDGKLLA 321

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + + D     I  +    +Q ++   F P+  ++   + D      V + D R
Sbjct: 322 TGTEDKLIRIWDLTTKRIIKILRGHEQDIYSLDFFPDGNRLVSGSGDR----TVRIWDLR 377

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFIN 304
             +    +      +     S +G+    +   D  + ++  D  +    ERL     I 
Sbjct: 378 SSQCSLTLSIEDG-VTTVAVSPDGQLIA-AGSLDHTVRVW--DSTTGFLVERL--DSGIE 431

Query: 305 ---------ISASYSPDSSQIV 317
                     S  +S D  QI 
Sbjct: 432 NGNGHKDSVYSVVFSNDGKQIA 453


>gi|170724761|ref|YP_001758787.1| peptidase S9 prolyl oligopeptidase [Shewanella woodyi ATCC 51908]
 gi|169810108|gb|ACA84692.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella woodyi ATCC 51908]
          Length = 692

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 16/121 (13%)

Query: 258 SMILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSP 311
             +   + S NGK+A+    + +        D++ +D ++  ++R+T T     S  +SP
Sbjct: 42  GGMSNVQLSPNGKQAVWLESRWDKELNKSQRDLWLIDTKTRQSKRMTFTNESESSPQWSP 101

Query: 312 DSSQIVFE---------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           D   I +          +   GK Q++ +  N  D + ++++ E        S  G+ + 
Sbjct: 102 DGQYIYYLGKIKQDKAKAPYNGKAQVFRLSVNTGDSQPMTKEVEG-VNRFQLSHDGNSLY 160

Query: 363 F 363
           F
Sbjct: 161 F 161



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 67/172 (38%), Gaps = 19/172 (11%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQIVFESDREGKE 326
           V+ +   +I   D Q+     L +T + + + S         +  +++++ F  D +G  
Sbjct: 238 VRLEGWSNIEIFDTQTATNSTLVDTQWRDDAPSPYGWLLGLSWQENNTELAFRIDFDGHP 297

Query: 327 -QLYVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-- 379
            +L++  +   D   +   +      +  D  W P  D I +      +  +   + D  
Sbjct: 298 GKLFIANARKMDAPSLELKRSGDVTLNSSDIKWRPNSDEICYRGADHGRVKLLCTEIDDG 357

Query: 380 --GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             G    ++  D  + + ++S +G+++ FS     D  S ++  D N +   
Sbjct: 358 EQGKTRNVIQGDMVIGSYSFSQNGKTVAFSHN-GLDHFSDMFIADANRKRAK 408



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 42/266 (15%), Positives = 84/266 (31%), Gaps = 52/266 (19%)

Query: 220 SPNQQKVAYATYD-----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SPN ++  +         ++    ++L+DT+  R  KR+        +P++S +G+    
Sbjct: 50  SPNGKQAVWLESRWDKELNKSQRDLWLIDTKT-RQSKRMTFTNESESSPQWSPDGQYIYY 108

Query: 275 SVQ---------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF------- 318
             +          +    ++ + + +  ++ +T  +        S D + + F       
Sbjct: 109 LGKIKQDKAKAPYNGKAQVFRLSVNTGDSQPMTKEVEGVNRFQLSHDGNSLYFLTSKTVK 168

Query: 319 -----ESDREGKEQ------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 S R                 LY +      QK +  D +  +   V S     I
Sbjct: 169 DKDEWASMRSSHSAPKYGHGERKTNPLYQLDLQHFKQKILIDDDKVVWEFKVNS-DESKI 227

Query: 362 AFTKFSGEKF-------AIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           A       +         I +      +   L+       AP  SP G  L+    ++ +
Sbjct: 228 ARITTDDNELVRLEGWSNIEIFDTQTATNSTLVDTQWRDDAP--SPYG-WLLGLSWQENN 284

Query: 414 TGSKLYSIDLNGRNETLINTPAYASD 439
           T    + ID +G    L    A   D
Sbjct: 285 TELA-FRIDFDGHPGKLFIANARKMD 309



 Score = 41.9 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 36/102 (35%), Gaps = 12/102 (11%)

Query: 347 ASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSP 399
               +   SP G    + +       +  +  + ++     Q + +   +  ++ P WSP
Sbjct: 42  GGMSNVQLSPNGKQAVWLESRWDKELNKSQRDLWLIDTKTRQSKRMTFTNESESSPQWSP 101

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDP 440
            G+ + +  K   D     Y    NG+ +   ++     S P
Sbjct: 102 DGQYIYYLGKIKQDKAKAPY----NGKAQVFRLSVNTGDSQP 139


>gi|112490208|pdb|2CO0|A Chain A, Wdr5 And Unmodified Histone H3 Complex At 2.25 Angstrom
          Length = 315

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 82/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             + +      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 16  YALMFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 71

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 72  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 128

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 129 SF---DESVRIWDVKTGMCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-DTAS 183

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G   + L++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 184 GQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNDLKLWDYS 225


>gi|86157761|ref|YP_464546.1| peptidase S9, dipeptidylpeptidase [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774272|gb|ABC81109.1| peptidase S9, dipeptidylpeptidase [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 749

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 55/190 (28%), Gaps = 50/190 (26%)

Query: 258 SMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFIN----------- 304
               A + S +G+ AL   S  +  A  +   DL +  T  L                  
Sbjct: 52  GRPTAVQLSPDGRAALFLRSGPRSRAQALLETDLATGVTRTLVEADGAGALSPEEAARLE 111

Query: 305 ---------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                         S D +++V+        +L+++         +         DP +S
Sbjct: 112 RQRITARGITHFVLSRDGARVVY----GLGGRLWLLDRAAGRAAPL--PGTEGALDPRFS 165

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQAPTW 397
           P G  +A+ K       + V    G  ER L                        +   W
Sbjct: 166 PDGRALAYVKRGD----LYVRAVPGGPERRLTRARGPDVTNGLAEFVAQEEMDRDEGYWW 221

Query: 398 SPSGRSLIFS 407
           SP GR + ++
Sbjct: 222 SPDGRRIAYA 231



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 55/184 (29%), Gaps = 45/184 (24%)

Query: 220 SPNQQKVAYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAP--------------- 263
           SP+ +   +         +  L  D         +    +  L+P               
Sbjct: 60  SPDGRAALFLRSGPRSRAQALLETDLATGVTRTLVEADGAGALSPEEAARLERQRITARG 119

Query: 264 ----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                 S +G R +  +       ++ +D  +     L  T    +   +SPD   + + 
Sbjct: 120 ITHFVLSRDGARVVYGL----GGRLWLLDRAAGRAAPLPGTEGA-LDPRFSPDGRALAYV 174

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQGDLIAF 363
                +  LYV    G  ++R+++ +     + +                WSP G  IA+
Sbjct: 175 K----RGDLYVRAVPGGPERRLTRARGPDVTNGLAEFVAQEEMDRDEGYWWSPDGRRIAY 230

Query: 364 TKFS 367
            +  
Sbjct: 231 AEVD 234



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/259 (17%), Positives = 77/259 (29%), Gaps = 49/259 (18%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD------EDILRVYLMDTR 245
            L ++DR  A  R       +   +PRFSP+ + +AY    D             L   R
Sbjct: 139 RLWLLDR--AAGRAAPLPGTEGALDPRFSPDGRALAYVKRGDLYVRAVPGGPERRLTRAR 196

Query: 246 IDRAPKRIGNFRSMILAPR-----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                  +  F +     R     +S +G+R   +           VD +S    R    
Sbjct: 197 GPDVTNGLAEFVAQEEMDRDEGYWWSPDGRRIAYA----------EVD-ESAVERRALCD 245

Query: 301 LFINISASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQ-----KRISQDKEASYFD 351
                            +   R G      +L V+ + G         R    +      
Sbjct: 246 PARPARP-----CEARAYP--RAGTPNAKVRLKVVAAAGGRAVPAVEVRWDASRYPYLAA 298

Query: 352 PVWSPQG--DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRS 403
             W+  G   L+   +   E+  +      G+   LL E  +         P + P GR 
Sbjct: 299 VRWAKGGPLALVVQDRLQQEEQVLAADPATGATRALLTERDDAWLNLWPGMPAFLPDGRF 358

Query: 404 LIFSRKKDGDTGSKLYSID 422
             +  ++ G    +L + D
Sbjct: 359 -WWVTERGGAPEVELRAPD 376


>gi|294674862|ref|YP_003575478.1| hypothetical protein PRU_2217 [Prevotella ruminicola 23]
 gi|294472676|gb|ADE82065.1| hypothetical protein PRU_2217 [Prevotella ruminicola 23]
          Length = 472

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/280 (15%), Positives = 83/280 (29%), Gaps = 62/280 (22%)

Query: 194 CVMDRDGANIRYLTPSRDQI---LFEPRFSPNQQKVAYATYDDEDILR------------ 238
            +   DG    +L  S +Q+   +  P + P+ +  A++T                    
Sbjct: 181 TMFQIDGQRE-WLKASNEQLGGSMVYPYWHPSGKYCAFSTNQTRQGFHMVAHERIEVFDL 239

Query: 239 -----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                VY   T        +        +P FS +GK       K +   ++  D +   
Sbjct: 240 SSDVFVYNPATHEIIKDSLLSTPDWSENSPVFSPDGKTLYYMTCKQQEYPMHYKDEKY-N 298

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             ++                          G++   +  +    +         S   P 
Sbjct: 299 LCKIAFDPAT---------GKY--------GEKVDTIFNAVAMGK---------SLTWPR 332

Query: 354 WSPQGDLIAFTKFSGEKFAI-------GVMKKDGSQERLLVEDSNLQAPT---WSPSGRS 403
            S  G  I FT      F+I        ++     + R L E ++ +A +   W+ +   
Sbjct: 333 PSYDGKYILFTLMDYGYFSIWHQESNQWLLNLQTGEARELKEINSEKADSYHNWNVNSHW 392

Query: 404 LIFSRKKDGDTGSKLYS--IDLNGRNETLINTPAYASDPQ 441
           ++F+ ++     S LY   +D  G        P     P+
Sbjct: 393 IVFTSRRGDGLYSHLYLACVDDKGHFSKPFLLP--QRHPK 430



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 39/117 (33%), Gaps = 20/117 (17%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEK 370
           D S+ VF    +    ++ +       K  ++    S   P W P G   AF T  + + 
Sbjct: 166 DPSKFVFHVRGDHGATMFQIDGQREWLKASNEQLGGSMVYPYWHPSGKYCAFSTNQTRQG 225

Query: 371 FA---------------IGVMKKDGSQER----LLVEDSNLQAPTWSPSGRSLIFSR 408
           F                + V      +      L   D +  +P +SP G++L +  
Sbjct: 226 FHMVAHERIEVFDLSSDVFVYNPATHEIIKDSLLSTPDWSENSPVFSPDGKTLYYMT 282


>gi|290998621|ref|XP_002681879.1| transcriptional repressor TUP1 [Naegleria gruberi]
 gi|284095504|gb|EFC49135.1| transcriptional repressor TUP1 [Naegleria gruberi]
          Length = 735

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 87/269 (32%), Gaps = 34/269 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQI--------IGKKFFSSPASWRKIAHTIS--DDIY 163
           GR +  G ++  +   ++DV   K+         +G           +    IS  DDI 
Sbjct: 425 GRYLATGSNKQAI---VFDVDTGKKFGTFSTIGPVGSSVQHEDDEREEPPKKISNDDDIV 481

Query: 164 QSITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +    E     S      S+ +V+G    ++ + D +   I       +  ++   FSP+
Sbjct: 482 EGGMKEDSYIRSVCFSPDSKYLVAGADDKTVKIWDVESKQIYRSLEGHELDIYSLDFSPD 541

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----FRSMILAPRFSSNGKRALISVQK 278
            + +   + D +      + D          GN     R  + +   S +GK    +   
Sbjct: 542 SRFLVSGSGDGK----AKIWDMESGECRHTCGNEEIGPREGVTSVAISPDGKTVA-TGSL 596

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFES-DREGKEQLYVMQS 333
           D  + ++  D+ +       +    +     S ++SPD   +   S DR     L +   
Sbjct: 597 DCVVRLW--DMATGDLIEAFSGNGGHDDSVYSVAFSPDGKTLASGSLDRT----LKIWDI 650

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             +                 +SP G  + 
Sbjct: 651 KSASCIASLSGHRDFVLSVAYSPDGKWLV 679



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 67/211 (31%), Gaps = 35/211 (16%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D  +    FSP+ + +        D   V + D    +  + +      I +  FS +  
Sbjct: 488 DSYIRSVCFSPDSKYLV----AGADDKTVKIWDVESKQIYRSLEGHELDIYSLDFSPD-S 542

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--------ISASYSPDSSQIVFES-- 320
           R L+S   D    I+  D++S       +T             S + SPD   +   S  
Sbjct: 543 RFLVSGSGDGKAKIW--DMESGECR---HTCGNEEIGPREGVTSVAISPDGKTVATGSLD 597

Query: 321 ------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                 D    + +     NG          + S +   +SP G  +A          I 
Sbjct: 598 CVVRLWDMATGDLIEAFSGNGG--------HDDSVYSVAFSPDGKTLASGSLD-RTLKIW 648

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +K       L      + +  +SP G+ L+
Sbjct: 649 DIKSASCIASLSGHRDFVLSVAYSPDGKWLV 679



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 89/266 (33%), Gaps = 36/266 (13%)

Query: 198 RDGANIRYLTPSRDQILFEPRFS---PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
             G+N + +    D       FS   P    V +   + E+  +    D  I     +  
Sbjct: 429 ATGSNKQAIVFDVDTGKKFGTFSTIGPVGSSVQHEDDEREEPPKKISNDDDIVEGGMK-- 486

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDS 313
              S I +  FS + K  + +   D+ + I+  D++S    R L        S  +SPDS
Sbjct: 487 -EDSYIRSVCFSPDSKYLV-AGADDKTVKIW--DVESKQIYRSLEGHELDIYSLDFSPDS 542

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             +V  S   G  +  +      + +                   SP G  +A       
Sbjct: 543 RFLVSGS---GDGKAKIWDMESGECRHTCGNEEIGPREGVTSVAISPDGKTVATGSLD-- 597

Query: 370 KFAIGVMKKDGSQERLLV-----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI--- 421
              + +                  D ++ +  +SP G++L        D   K++ I   
Sbjct: 598 -CVVRLWDMATGDLIEAFSGNGGHDDSVYSVAFSPDGKTLA---SGSLDRTLKIWDIKSA 653

Query: 422 ----DLNGRNETLINTPAYASDPQWV 443
                L+G  + +++  AY+ D +W+
Sbjct: 654 SCIASLSGHRDFVLSV-AYSPDGKWL 678



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 57/184 (30%), Gaps = 31/184 (16%)

Query: 109 QVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           + + +  +  +G       L    RLWD+     I                H   D +Y 
Sbjct: 577 EGVTSVAISPDGKTVATGSLDCVVRLWDMATGDLIEAFSGNGG--------H--DDSVYS 626

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                 G          +++ SG +  +L + D   A+           +    +SP+ +
Sbjct: 627 VAFSPDG----------KTLASGSLDRTLKIWDIKSASCIASLSGHRDFVLSVAYSPDGK 676

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMD 283
            +   + D      V   D R +     +   ++ +++   +   KR L +    D    
Sbjct: 677 WLVSGSKDR----SVQFWDPRSNVLHLMLQGHKNSVISVSLNP--KRPLFATGSGDFRAR 730

Query: 284 IYSV 287
           ++  
Sbjct: 731 VWRY 734


>gi|307332246|ref|ZP_07611326.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Streptomyces violaceusniger Tu 4113]
 gi|306882107|gb|EFN13213.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Streptomyces violaceusniger Tu 4113]
          Length = 608

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 15/177 (8%)

Query: 263 PRFS---SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           P ++    +    L         ++Y+ D  + A  ++T+          SPD   I + 
Sbjct: 16  PDWAEEAPDHS--LFVSNATGTYELYAWDRATGAQRQVTDRPNGTTDGVLSPDGRWIWWF 73

Query: 320 SDREGKEQLYVMQ---SNGSDQKRISQDKEASYFDPVWSP------QGDLIAFTKFSGEK 370
           SD +G E    ++   S G   +R + +      DP +         G  +       + 
Sbjct: 74  SDTDGDEFGVWLRQPFSAGEGDERPADEPATPGLDPSYPAGLALGRDGTAVVGRSTDEDG 133

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGR 426
             I V++  G  E +     +      S  G  +     + GD   S +  + L+G 
Sbjct: 134 STIHVVRPGGEPEEIYRHRESAGVGDLSHDGTLIAIEHTEHGDAMHSAIRVLRLDGT 190



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 83/259 (32%), Gaps = 28/259 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +    R   +  P ++      +    +      +Y  D R   A +++ +  +    
Sbjct: 2   PDWEKRFRAPRVGLPDWAEEAPDHSLFVSNATGTYELYAWD-RATGAQRQVTDRPNGTTD 60

Query: 263 PRFSSNGKRALISVQKDE---AMDIYSVDLQSNATERLTNTLF-INISASYSP------D 312
              S +G+        D     + +          ER  +      +  SY        D
Sbjct: 61  GVLSPDGRWIWWFSDTDGDEFGVWLRQPFSAGEGDERPADEPATPGLDPSYPAGLALGRD 120

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-- 370
            + +V  S  E    ++V++  G + + I + +E S      S  G LIA          
Sbjct: 121 GTAVVGRSTDEDGSTIHVVRP-GGEPEEIYRHRE-SAGVGDLSHDGTLIAIEHTEHGDAM 178

Query: 371 -FAIGVMKKDGSQERLL--VEDSNLQ----APTWSP---SGRSLIFSRKKDGDTGSKLYS 420
             AI V++ DG+    L   +    +       ++P     R L+   ++ G     ++ 
Sbjct: 179 HSAIRVLRLDGTAVAELDDTKGGTEELGLSVMGFAPVEGDTRLLV-GHQRRGRWEPMVWD 237

Query: 421 IDLNGRNETL-INTPAYAS 438
             + G    L I+ P    
Sbjct: 238 -PVTGVETALAIDLPGDVG 255



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 85/315 (26%), Gaps = 40/315 (12%)

Query: 90  KITNPDSIPRFQDWNSLGAQV-LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
           +   P   P +    +LG     V GR   E    + V      V+   +          
Sbjct: 101 EPATPGLDPSYPAGLALGRDGTAVVGRSTDEDGSTIHV------VRPGGEPEEIYRHRES 154

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           A    ++H                 +  ++ +  +     + +++ V+  DG  +  L  
Sbjct: 155 AGVGDLSH-----------------DGTLIAIEHTEHGDAMHSAIRVLRLDGTAVAELDD 197

Query: 209 SRDQILFEP----RFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           ++            F+P          +         + D           +    + A 
Sbjct: 198 TKGGTEELGLSVMGFAPVEGDTRLLVGHQRRGRWEPMVWDPVTGVETALAIDLPGDVGA- 256

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +  +G   L+        ++    L S    RL         A   PD +     S  E
Sbjct: 257 DWFPDGSALLVEHSHQARSELLRYGLGSGELTRLETPAGTISGAMARPDGTVEFLWSSAE 316

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              Q+     + S +  +     A+      +      A+    G +    V K  G   
Sbjct: 317 KPPQVR----STSGRTVLDPPGFAAPESVRVTD-----AWVDGPGGRVHALVQKPAGEGP 367

Query: 384 RLLVEDSNLQAPTWS 398
              V D +   PTW 
Sbjct: 368 FPTVFDIH-GGPTWH 381


>gi|196015990|ref|XP_002117850.1| hypothetical protein TRIADDRAFT_51125 [Trichoplax adhaerens]
 gi|190579601|gb|EDV19693.1| hypothetical protein TRIADDRAFT_51125 [Trichoplax adhaerens]
          Length = 381

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 75/216 (34%), Gaps = 10/216 (4%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            + +       Y        +   +FSP+   VA A+ D      V L    +       
Sbjct: 1   MIWNFKAHTRAYRFIGHKDAVMHVQFSPSGHLVASASRDK----TVRLWIPSVKGESTVF 56

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                 +    FS++G+  L +   D+ + +++V  Q      L   L     A +SPD 
Sbjct: 57  KAHTGTVRCVDFSNDGQSLL-TASDDKTIKLWTVHRQKFQFT-LNAHLNWVRRARFSPDG 114

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             IV  SD    + + +   +  +      +      D  + P G  IA    +     I
Sbjct: 115 RLIVSGSD---DKTVKLWDRSSKECIHTFYEHSGMVNDVAFHPNGTCIA-AAGTDNTVKI 170

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             ++ +   +   +  + + + ++ PSG  LI S  
Sbjct: 171 WDIRINKLLQHYQIHSNAINSISFHPSGNFLITSSS 206



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 58/197 (29%), Gaps = 12/197 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             S      L  + R     ++   +    +   RFSP+ + +   + D      V L D
Sbjct: 77  TASDDKTIKLWTVHR--QKFQFTLNAHLNWVRRARFSPDGRLIVSGSDDK----TVKLWD 130

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                          M+    F  NG     +   D  + I+ + +         ++  I
Sbjct: 131 RSSKECIHTFYEHSGMVNDVAFHPNGTCIAAAGT-DNTVKIWDIRINKLLQHYQIHSNAI 189

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N S S+ P  +   F         L ++              +       +SP G+  A 
Sbjct: 190 N-SISFHPSGN---FLITSSSDTTLKILDLLEGRLFYTLHGHQGPATAVTFSPTGEYFA- 244

Query: 364 TKFSGEKFAIGVMKKDG 380
           +  + E+  +     D 
Sbjct: 245 SGGADEQVMVWKTNFDT 261


>gi|157960113|ref|YP_001500147.1| peptidase S9 prolyl oligopeptidase [Shewanella pealeana ATCC
           700345]
 gi|157845113|gb|ABV85612.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella pealeana ATCC 700345]
          Length = 686

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 18/144 (12%)

Query: 258 SMILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSP 311
             + +   S NGK A+    + +        D++ +D +S  ++R+T T     S  +SP
Sbjct: 39  GNMGSVTLSPNGKHAVWLESRWDKELDKSQRDLWLLDTKSRQSKRMTFTNESESSPQWSP 98

Query: 312 DSSQIVFESDR---------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           D   + +              GK Q++ +  +  D + ++++ E        S  G  + 
Sbjct: 99  DGEYVYYLGKIKQEGAKAPFNGKTQVFRLSVSSGDSQPMTKEAEG-VAGFELSHDGKSLY 157

Query: 363 F--TKFSGEKFAIGVMKKDGSQER 384
           F  TK + +      M+   S  +
Sbjct: 158 FLATKTTTDTDQWASMRTSHSAPK 181



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 83/226 (36%), Gaps = 27/226 (11%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-------EA 281
             + ++    +Y +D    +  K + +   ++   + S +G +       D         
Sbjct: 182 YGHGEQKTNPLYQLDLEHFKQ-KLLLDDDKVVWEFKVSQDGSKIARITTTDNELVFLEGW 240

Query: 282 MDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQIVFESDREGKE-QLYVM 331
             +   D ++     L +T + + + S         +  +++++ F  D +G   QL++ 
Sbjct: 241 SYVEIFDTKTKQNSVLADTQWRDNAPSAYGWLLGLAWQENNTELAFRIDFDGHPGQLFIA 300

Query: 332 QSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD----GSQE 383
            +  +D+  +   +      +  D  W P  D + +      +  +   + D    G   
Sbjct: 301 NAKSTDKPSLEVSRPGDVTLTASDLTWRPNSDELCYRGADYGRVKLFCTEIDDGEQGDTR 360

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            ++  D  + + ++S +G+S+ FS     D  S L+  D N     
Sbjct: 361 AVIPGDMVIGSYSFSQNGKSVAFSHN-GLDHFSDLFIADANSSRAK 405



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 17/141 (12%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKE------QLYVMQSNGSDQKRISQDKEASYFDPV 353
            +    S + SP+    V+   R  KE       L+++ +     KR++   E S   P 
Sbjct: 37  DIGNMGSVTLSPNGKHAVWLESRWDKELDKSQRDLWLLDTKSRQSKRMTFTNE-SESSPQ 95

Query: 354 WSPQGDLIAF---TKFSG------EKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRS 403
           WSP G+ + +    K  G       K  +  +       + + +++  +     S  G+S
Sbjct: 96  WSPDGEYVYYLGKIKQEGAKAPFNGKTQVFRLSVSSGDSQPMTKEAEGVAGFELSHDGKS 155

Query: 404 LIFSRKKDGDTGSKLYSIDLN 424
           L F   K      +  S+  +
Sbjct: 156 LYFLATKTTTDTDQWASMRTS 176



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 85/266 (31%), Gaps = 52/266 (19%)

Query: 220 SPNQQKVAYATYD-----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SPN +   +         D+    ++L+DT+  R  KR+        +P++S +G+    
Sbjct: 47  SPNGKHAVWLESRWDKELDKSQRDLWLLDTK-SRQSKRMTFTNESESSPQWSPDGEYVYY 105

Query: 275 SVQ---------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF------- 318
             +          +    ++ + + S  ++ +T           S D   + F       
Sbjct: 106 LGKIKQEGAKAPFNGKTQVFRLSVSSGDSQPMTKEAEGVAGFELSHDGKSLYFLATKTTT 165

Query: 319 -----ESDREGKEQ------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 S R                 LY +      QK +  D +  +   V S  G  I
Sbjct: 166 DTDQWASMRTSHSAPKYGHGEQKTNPLYQLDLEHFKQKLLLDDDKVVWEFKV-SQDGSKI 224

Query: 362 AFTKFSGEKFA-------IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGD 413
           A    +  +         + +      Q  +L +      AP  S  G  L+    ++ +
Sbjct: 225 ARITTTDNELVFLEGWSYVEIFDTKTKQNSVLADTQWRDNAP--SAYG-WLLGLAWQENN 281

Query: 414 TGSKLYSIDLNGRNETLINTPAYASD 439
           T    + ID +G    L    A ++D
Sbjct: 282 TELA-FRIDFDGHPGQLFIANAKSTD 306


>gi|114706721|ref|ZP_01439621.1| WD domain/cytochrome c family protein [Fulvimarina pelagi HTCC2506]
 gi|114537669|gb|EAU40793.1| WD domain/cytochrome c family protein [Fulvimarina pelagi HTCC2506]
          Length = 464

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 78/193 (40%), Gaps = 15/193 (7%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTLFINISAS 308
           P R+      I +   S +GKR  ++   D ++ ++++D        RL         A+
Sbjct: 42  PDRLAGHGGPIKSVVLSEDGKR-ALTASFDYSVILWALDREDGRILHRLEGHKAAVNDAT 100

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + P +++ V   D +G   ++    +      + +D      D   S  G L A  ++ G
Sbjct: 101 FIPGTNKAVSVGD-DGAVAIW--DLDRGALIELIEDTGEKALDVAVSLDGKLAAVARWDG 157

Query: 369 EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR- 426
                 ++K  G +   L   D N+ A  +S  GR+L ++   DG     ++ I  +GR 
Sbjct: 158 TARLFDLVK--GKEVDTLSGHDGNVNAVAFSQDGRTL-YTAAYDGR--ILVWPI-ADGRI 211

Query: 427 --NETLINTPAYA 437
             +  L++   + 
Sbjct: 212 SGSSRLLHAAGWG 224



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 83/252 (32%), Gaps = 23/252 (9%)

Query: 162 IYQSITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           I   + G K   N       +   VS     ++ + D D   +  L     +   +   S
Sbjct: 85  ILHRLEGHKAAVNDATFIPGTNKAVSVGDDGAVAIWDLDRGALIELIEDTGEKALDVAVS 144

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + +  A A +D        L D    +    +      + A  FS +G+    +   D 
Sbjct: 145 LDGKLAAVARWDG----TARLFDLVKGKEVDTLSGHDGNVNAVAFSQDGRTL-YTAAYDG 199

Query: 281 AMDIY-SVDLQSNATERLTN--TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            + ++   D + + + RL +     +N+ A+  P  S + F    +G     V      D
Sbjct: 200 RILVWPIADGRISGSSRLLHAAGWGVNVLATL-PGGSLLAF-GTIDGDAG--VADLETGD 255

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              I +D +        SP+    A    +G    I V   +   E  +    +L  P W
Sbjct: 256 TA-ILKDGDHPVLALATSPRASTFALGTANG---EIAVFDIETGAE--IESYGDLYGPVW 309

Query: 398 ----SPSGRSLI 405
               +P G  L 
Sbjct: 310 GLSFTPEGDQLY 321


>gi|325676039|ref|ZP_08155722.1| peptidase S9, prolyl oligopeptidase active domain protein
           [Rhodococcus equi ATCC 33707]
 gi|325553277|gb|EGD22956.1| peptidase S9, prolyl oligopeptidase active domain protein
           [Rhodococcus equi ATCC 33707]
          Length = 679

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 63/186 (33%), Gaps = 14/186 (7%)

Query: 265 FSSNGKRALISVQKDE-----AMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVF 318
            + +G   + +             +  +D  +     + +    ++S    SPD+S +V+
Sbjct: 219 LAPDGSFVVSTWSLPGVLGSMRTVLVRIDAATGERTTIVDDDGADLSRPVISPDASSVVY 278

Query: 319 ESDREG----KEQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFA 372
             +  G      ++ + + +  D + +        +    VW P    +  T     +  
Sbjct: 279 LRESYGDAEQAPRITLHRFDFEDARVVDLASGWDRWPTSAVWLPDSAGVLLTADERGRGP 338

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF--SRKKDGDTGSKLYSIDLNGRNETL 430
           + V++ DG+   L  +D+       SP G ++    +         ++     +    T 
Sbjct: 339 VFVLRGDGTPAPLTTDDAAYSDLQVSPDGSAVYALRASYARPPHPVRIALTGADAGTVTE 398

Query: 431 INTPAY 436
           +  P+ 
Sbjct: 399 LRAPSE 404



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 67/211 (31%), Gaps = 45/211 (21%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V G ++  L  +D        +       L  P  SP+   V Y      D  +     
Sbjct: 234 GVLGSMRTVLVRIDAATGERTTIVDDDGADLSRPVISPDASSVVYLRESYGDAEQ----- 288

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                             APR         I++ + +  D   VDL S            
Sbjct: 289 ------------------APR---------ITLHRFDFEDARVVDLASGWDR-------W 314

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-- 361
             SA + PDS+ ++  +D  G+  ++V++ +G+     + D  A+Y D   SP G  +  
Sbjct: 315 PTSAVWLPDSAGVLLTADERGRGPVFVLRGDGTPAPLTTDD--AAYSDLQVSPDGSAVYA 372

Query: 362 --AFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             A          I +   D      L   S
Sbjct: 373 LRASYARPPHPVRIALTGADAGTVTELRAPS 403



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 39/97 (40%), Gaps = 15/97 (15%)

Query: 265 FSSNGKRALISVQKDEAMD------IYSVDLQS-NATERLTNTLFINISASYSPDSSQIV 317
            S +G R +IS    +A +      ++ +D     +  R+T  +     A+++     ++
Sbjct: 30  LSPDGSRLVISQAVLDADETKYVSALWEIDPAGDRSARRITWGVEGEGGAAFTSTGD-LL 88

Query: 318 FESDR-------EGKEQLYVMQSNGSDQKRISQDKEA 347
           F + R       +    L+ + ++G +  R++     
Sbjct: 89  FTASRPVPGAADDAPNGLWRLPADGGEASRVACRGGG 125


>gi|115398810|ref|XP_001214994.1| WD-repeat protein 5 [Aspergillus terreus NIH2624]
 gi|114191877|gb|EAU33577.1| WD-repeat protein 5 [Aspergillus terreus NIH2624]
          Length = 514

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 70/210 (33%), Gaps = 18/210 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              ++L     + +   RFSP+   +A           V + DT   +         + I
Sbjct: 144 YRPKFLLRGHLRGVSAVRFSPDATMIA----SGGADGAVKVWDTLSGKLIHTFEGHLAGI 199

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVF 318
               +S +G     S   D+ + ++  ++ +     +            ++SP  + +V 
Sbjct: 200 STISWSPDGATIA-SGSDDKTIRLW--NVLTGKAHPIPFVGHHNYVYQIAFSPKGNMLVS 256

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E +++     +   R                 G LIA     G    I +   
Sbjct: 257 GSY---DEAVFLWDVRSASVMRSLPAHSDPVGGIDVVWDGTLIASCATDG---LIRIWDT 310

Query: 379 DGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
              Q  R LV + N  + A  +SP+G+ ++
Sbjct: 311 ATGQCLRTLVHEDNPPVTAVKFSPNGKFVL 340



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 66/197 (33%), Gaps = 17/197 (8%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G    R    +  + SG    ++ V D     + +        +    +SP+   +A  
Sbjct: 155 RGVSAVRFSPDATMIASGGADGAVKVWDTLSGKLIHTFEGHLAGISTISWSPDGATIASG 214

Query: 230 TYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           + D      + L +    +  P       + +    FS  G   + S   DEA+ ++ V 
Sbjct: 215 SDDK----TIRLWNVLTGKAHPIPFVGHHNYVYQIAFSPKGNMLV-SGSYDEAVFLWDVR 269

Query: 289 LQSNATERLTNTL----FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             S     L         I++   +  D + I   +  +G  +++   + G   + +  +
Sbjct: 270 SAS-VMRSLPAHSDPVGGIDV--VW--DGTLIASCAT-DGLIRIWDT-ATGQCLRTLVHE 322

Query: 345 KEASYFDPVWSPQGDLI 361
                    +SP G  +
Sbjct: 323 DNPPVTAVKFSPNGKFV 339


>gi|327272786|ref|XP_003221165.1| PREDICTED: POC1 centriolar protein homolog B-like [Anolis
           carolinensis]
          Length = 470

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 70/207 (33%), Gaps = 13/207 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P  + +A ++ D      + + + R +    R       +   +FS +G     S  
Sbjct: 25  AFNPTTKALATSSLDR----FLMIWNLRPNSRAFRFMGHVEGVTCVQFSPDGHLLA-SAA 79

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D    ++ +      +  L        S ++S DS  +V  S+    + + V      +
Sbjct: 80  QDRTARLW-IPCIHGESTPLKGHTAPVRSVNFSHDSQFLVTASN---DKSVKVWSVYRQN 135

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                           +SP G LI       +   +  ++     + ++  D       +
Sbjct: 136 ILFTLSQHTHWVSCAKYSPDGRLIISCS-EDKTVKVWDIRNKTCIDSIIDHDGFTNYVDF 194

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           SP G  +  +     D   K++ I +N
Sbjct: 195 SPDGTCIACA---GSDHTVKIWDIRIN 218



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 56/178 (31%), Gaps = 9/178 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+     S+ V      NI +        +   ++SP+ + +   + D      V + D 
Sbjct: 118 VTASNDKSVKVWSVYRQNILFTLSQHTHWVSCAKYSPDGRLIISCSEDK----TVKVWDI 173

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           R       I +         FS +G     +   D  + I+ + +     ++        
Sbjct: 174 RNKTCIDSIIDHDGFTNYVDFSPDGTCIACAGS-DHTVKIWDIRIN-KLLQQHRVHRAGV 231

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             AS+ P  + ++  S+      L +M   G          +       +S  G+  A
Sbjct: 232 NYASFHPSGNYLITASN---DGTLKIMDLLGGRLLYTLHGHKGPVLSAAFSKGGETFA 286


>gi|94984819|ref|YP_604183.1| hypothetical protein Dgeo_0712 [Deinococcus geothermalis DSM 11300]
 gi|94555100|gb|ABF45014.1| WD40-repeat containing protein [Deinococcus geothermalis DSM 11300]
          Length = 348

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 62/192 (32%), Gaps = 16/192 (8%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDEAMDIYS 286
           A         V L+D       + +     + L   P  S++G+   + +  D    +  
Sbjct: 67  AAVRGRYSAHVRLLDPTTGEVRREVFLPPEVQLDVPPALSADGRWLAVVLTPDPVTHVGR 126

Query: 287 VDLQSNATE-------RLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           V + S            L+        A ++ PD + +   S+R G  QL+   + G   
Sbjct: 127 VGILSTTPTTPPGFQKVLSAGGLNGTLALAFGPDGTHLA-TSNRSGYAQLWEWPT-GRRV 184

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             ++ +         +SP G L A       +  I          R  +        T++
Sbjct: 185 TTVTSETGYEPSRLEFSPDGRLFAPIFRGQTRTRIF--DTQTGALRTTLSGVGYG--TFT 240

Query: 399 PSGRSLIFSRKK 410
           P  R  + SR +
Sbjct: 241 PDSRGFLASRGR 252


>gi|16332166|ref|NP_442894.1| beta transducin-like-protein [Synechocystis sp. PCC 6803]
 gi|3025125|sp|P74598|Y1491_SYNY3 RecName: Full=Uncharacterized WD repeat-containing protein sll1491
 gi|1653795|dbj|BAA18706.1| beta transducin-like protein [Synechocystis sp. PCC 6803]
          Length = 348

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 82/268 (30%), Gaps = 54/268 (20%)

Query: 199 DGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D AN   +   R  +        S + Q +A A  ++ D+ RV     R     + +   
Sbjct: 89  DLANQEVVYSQRSPVNNFADLAISADGQWLAIAADNNVDVRRV-----RDGMRVETLVGH 143

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              +    FS +G+  +     D  + I+      N  + L + L    S  ++PD SQ 
Sbjct: 144 TDKVSGVAFSPDGETIVSVSGGDRTIRIWE-RASGNLIQTLADNLGPTTSVVFTPDGSQ- 201

Query: 317 VFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA------------- 362
            F +   G+++ +    +N  +    S  +         +P G  +              
Sbjct: 202 -FITGAIGQDRTIKFWDANTFELLGTSPQQPGFINGLAVTPDGRKLVGAVRNFVKAWNLA 260

Query: 363 ----------------FTKFSGEKFAIGVMKKDGS--------QERLLV---EDSNLQAP 395
                               S     +    K+G+         +++         + + 
Sbjct: 261 DAKELFSVRGPSLEINTIAVSPNNRWVATANKEGTIMIFDLANGKQVTTLRGHQGWVLSL 320

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +SP G +L        D   K++ +  
Sbjct: 321 AFSPDGNTLY---SGAEDKTVKIWDLSA 345



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 57/181 (31%), Gaps = 10/181 (5%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A+A     +   V         A + +  F+ +I A   + +GK   ++   +    I  
Sbjct: 31  AHANASTPNPYTVAQTTASPSVAVENLSGFQGIITALNITPDGKYLAVATADN---QITL 87

Query: 287 VDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           +DL +        +   N    + S D   +   +D      + V +     +       
Sbjct: 88  IDLANQEVVYSQRSPVNNFADLAISADGQWLAIAAD----NNVDVRRVRDGMRVETLVGH 143

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSL 404
                   +SP G+ I           I   +  G+  + L ++     +  ++P G   
Sbjct: 144 TDKVSGVAFSPDGETIVSVSGGDRTIRIW-ERASGNLIQTLADNLGPTTSVVFTPDGSQF 202

Query: 405 I 405
           I
Sbjct: 203 I 203



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/219 (9%), Positives = 64/219 (29%), Gaps = 51/219 (23%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           RDG  +  L    D++     FSP+ + +   +        + + +       + + +  
Sbjct: 132 RDGMRVETLVGHTDKVSGV-AFSPDGETIVSVS---GGDRTIRIWERASGNLIQTLADNL 187

Query: 258 SMILAPRFSSNGKRALI-SVQKDEAMDIYSVD---LQSNATERLTNTLFINISASYSPDS 313
               +  F+ +G + +  ++ +D  +  +  +   L   + ++           + +PD 
Sbjct: 188 GPTTSVVFTPDGSQFITGAIGQDRTIKFWDANTFELLGTSPQQ----PGFINGLAVTPDG 243

Query: 314 SQIV--------------------------------------FESDREGKEQLYVMQSNG 335
            ++V                                      + +    +  + +     
Sbjct: 244 RKLVGAVRNFVKAWNLADAKELFSVRGPSLEINTIAVSPNNRWVATANKEGTIMIFDLAN 303

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             Q    +  +       +SP G+ + ++    +   I 
Sbjct: 304 GKQVTTLRGHQGWVLSLAFSPDGNTL-YSGAEDKTVKIW 341



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 41/122 (33%), Gaps = 5/122 (4%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            + G  N   +      + G ++N +   +   A   +        +     SPN + VA
Sbjct: 229 QQPGFINGLAVTPDGRKLVGAVRNFVKAWNLADAKELFSVRGPSLEINTIAVSPNNRWVA 288

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                      + + D    +    +   +  +L+  FS +G     S  +D+ + I+ +
Sbjct: 289 ----TANKEGTIMIFDLANGKQVTTLRGHQGWVLSLAFSPDGNTL-YSGAEDKTVKIWDL 343

Query: 288 DL 289
             
Sbjct: 344 SA 345


>gi|158313622|ref|YP_001506130.1| WD-40 repeat-containing protein [Frankia sp. EAN1pec]
 gi|158109027|gb|ABW11224.1| WD-40 repeat protein [Frankia sp. EAN1pec]
          Length = 1427

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 69/231 (29%), Gaps = 18/231 (7%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             R +    D  +     + +   V     D           T     P   G  R     
Sbjct: 931  ARLVLRGHDGPVNGCAVTADGTGVITVGDDGSLRTWDATTGTPRLAVPVTGGRLRCCATG 990

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            P     G   + +  +D  + ++   L      RL       ++ ++ PD S +V  +  
Sbjct: 991  P-----GGAVVATGGEDGTIRLHD-PLTGEILRRLAGHAGPVLALAFGPDGSWLV-SAGE 1043

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGS 381
            +G   L    +    Q  +  D          +P G  +     +    AI V     G 
Sbjct: 1044 DGT--LRRWDTAAGRQTGVLSDGSRPVRACAVAPDGSYLV----APAGDAISVRDLPTGG 1097

Query: 382  QERLLVEDSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRNE 428
            Q   L   +  +A   +P G  +     +   +   TGS L      GRNE
Sbjct: 1098 QRAELTGATGTRACVVAPDGSWIASAGRYGTIRVWSTGSDLPRPSTAGRNE 1148



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 10/156 (6%)

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            + L D       +R+      +LA  F  +G   + S  +D  +  +        T  L+
Sbjct: 1005 IRLHDPLTGEILRRLAGHAGPVLALAFGPDGSWLV-SAGEDGTLRRWDT-AAGRQTGVLS 1062

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +      + + +PD S +V        + + V       Q+        +    V +P G
Sbjct: 1063 DGSRPVRACAVAPDGSYLV----APAGDAISVRDLPTGGQRAELTGATGT-RACVVAPDG 1117

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              IA     G    I V        R      N  A
Sbjct: 1118 SWIASAGRYGT---IRVWSTGSDLPRPSTAGRNEGA 1150



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 58/369 (15%), Positives = 96/369 (26%), Gaps = 82/369 (22%)

Query: 83   SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG-RVIKEGKDRLRV----EFRLWDVKDRK 137
              D+ +++  +P+ +         G    V G  V  +G   + V      R WD     
Sbjct: 913  PGDTGERRGRDPEGVDPVARLVLRGHDGPVNGCAVTADGTGVITVGDDGSLRTWDATTGT 972

Query: 138  QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
              +           R  A           TG  G            V +G    ++ + D
Sbjct: 973  PRLAVPVTGGR--LRCCA-----------TGPGGA----------VVATGGEDGTIRLHD 1009

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
                 I          +    F P+   +  A  D      +   DT   R    + +  
Sbjct: 1010 PLTGEILRRLAGHAGPVLALAFGPDGSWLVSAGEDG----TLRRWDTAAGRQTGVLSDGS 1065

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQI 316
              + A   + +G   +          I   DL +      LT       +   +PD S I
Sbjct: 1066 RPVRACAVAPDGSYLV----APAGDAISVRDLPTGGQRAELTGATGT-RACVVAPDGSWI 1120

Query: 317  VFESDREGKEQLYVMQSNGSDQKRISQDKE----------ASYFDPVWSPQGDLIAFTKF 366
                   G+     + S GSD  R S              A       S  G + A+   
Sbjct: 1121 A----SAGRYGTIRVWSTGSDLPRPSTAGRNEGARGCAVVAGGLVVSSSDDGTVTAWDPV 1176

Query: 367  SGEKFA-----------------------------IGVMKKDGSQER-LLVEDSNLQAPT 396
            +GE  A                             + + +      R +L  D  +   T
Sbjct: 1177 TGEPGAAMAGLPGPARGCRAGPGGRWVVVSAQPTALRLWEPATGVVRAVLTADVAILGFT 1236

Query: 397  WSPSGRSLI 405
             S  G  + 
Sbjct: 1237 VSADGSWVA 1245


>gi|126662563|ref|ZP_01733562.1| prolyl oligopeptidase family protein [Flavobacteria bacterium
           BAL38]
 gi|126625942|gb|EAZ96631.1| prolyl oligopeptidase family protein [Flavobacteria bacterium
           BAL38]
          Length = 620

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 53/143 (37%), Gaps = 12/143 (8%)

Query: 219 FSPNQQKVAYA-------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +SP+  K+ Y         Y       +Y  D           +     +AP+FS  G  
Sbjct: 164 WSPDGTKIIYVCKKKAGTAYATSTNTDLYEYDLATKITKNLTESNLGYDIAPQFSPKGDL 223

Query: 272 ALISVQKDE-AMDIYSVDLQSNAT-ERLTNTL-FINISASYSPDSSQIVFESDREGKEQL 328
             + +++D    D   + ++       LT        S ++S D  ++ F +  +G +QL
Sbjct: 224 TWLQMKRDGYEADKNDIIVRHRGLDINLTAGWDGTVDSFTWSNDGKKVYFIAAIKGTKQL 283

Query: 329 YVMQSNG--SDQKRISQDKEASY 349
           + +   G      R++Q  +  +
Sbjct: 284 FEVNFPGLTKIAVRVTQLTDGDF 306



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 95/254 (37%), Gaps = 30/254 (11%)

Query: 219 FSPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            S + + + Y    A+ ++  I   Y            + +++S++     S +GK   +
Sbjct: 25  ISKDGKLLVYKVGTASIEENKINSKYYTIPVQGGNATLVEDYKSLLADKNVSPDGKY-FL 83

Query: 275 SVQKDEAMDIYSVDLQ---SNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYV 330
           S Q+ +   +   DL    S  T ++   L      +++  +   VF S +++    + +
Sbjct: 84  SSQEVKVEKLLGKDLYPELSKTTAQVYTGLDYRHWDTWNDGTHNHVFYSENKKDAVGIDI 143

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKF------AIGVMKKDGSQ 382
           M +   D  +     +  Y   VWSP G  I +   K +G  +       +         
Sbjct: 144 MPNEPFDAPQKPFGGDEDY---VWSPDGTKIIYVCKKKAGTAYATSTNTDLYEYDLATKI 200

Query: 383 ERLLVED--SNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYS-----IDLNGRNETLIN 432
            + L E       AP +SP G       K+DG   D    +       I+L    +  ++
Sbjct: 201 TKNLTESNLGYDIAPQFSPKGDLTWLQMKRDGYEADKNDIIVRHRGLDINLTAGWDGTVD 260

Query: 433 TPAYASDPQWVGFM 446
           +  +++D + V F+
Sbjct: 261 SFTWSNDGKKVYFI 274



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 88/265 (33%), Gaps = 20/265 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           + S+    I +    +   G N   +   +  +L +   SP+ +    +     + L   
Sbjct: 38  TASIEENKINSKYYTIPVQGGNATLVEDYKS-LLADKNVSPDGKYFLSSQEVKVEKLLGK 96

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKR--ALISVQKDEAMDIYSVDLQSNATERLT 298
            +   + +   ++           ++ +G       S  K +A+ I  +  +     +  
Sbjct: 97  DLYPELSKTTAQVYTGLDYRHWDTWN-DGTHNHVFYSENKKDAVGIDIMPNEPFDAPQKP 155

Query: 299 NTLFINISASYSPDSSQIVFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                +    +SPD ++I++                 LY         K +++       
Sbjct: 156 FGGDEDY--VWSPDGTKIIYVCKKKAGTAYATSTNTDLYEYDLATKITKNLTESNLGYDI 213

Query: 351 DPVWSPQGD--LIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIF 406
            P +SP+GD   +   +   E     ++ +    +  L    D  + + TWS  G+ + F
Sbjct: 214 APQFSPKGDLTWLQMKRDGYEADKNDIIVRHRGLDINLTAGWDGTVDSFTWSNDGKKVYF 273

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLI 431
                G    +L+ ++  G  +  +
Sbjct: 274 IAAIKGTK--QLFEVNFPGLTKIAV 296


>gi|238508602|ref|XP_002385489.1| WD-repeat protein, putative [Aspergillus flavus NRRL3357]
 gi|220688381|gb|EED44734.1| WD-repeat protein, putative [Aspergillus flavus NRRL3357]
          Length = 1566

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 15/189 (7%)

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            E I    L D       + +     M+    FS +    L S   D  + ++  D +S  
Sbjct: 1300 ESITGRKLRDKSWSAQLQTLKGHSGMVNTVVFSPD-SEILASGSGDGTIQLW--DAKSGK 1356

Query: 294  TERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              ++ ++ L    +  +SPDS  +V  S       +++      +Q +IS+      ++ 
Sbjct: 1357 QLQIFDSCLGWVNTMVFSPDSEVLVLSSL---NRTIWLWDIKSREQLQISKGYLDYTYNL 1413

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKK 410
             +S   +++A     G    I +      +    ++          +S   + L      
Sbjct: 1414 AFSLDSEILASGSGDGT---IQLWDTKSREPLQTLDSYLEWVNTMAFSLDSKILALGSD- 1469

Query: 411  DGDTGSKLY 419
              D   +L+
Sbjct: 1470 --DKTVQLW 1476



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 73/217 (33%), Gaps = 17/217 (7%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    ++    FSP+ + +A  + D      + L D +  +  +   +    +    
Sbjct: 1317 QTLKGHSGMVNTVVFSPDSEILASGSGDG----TIQLWDAKSGKQLQIFDSCLGWVNTMV 1372

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDRE 323
            FS + +  ++S        I+  D++S    +++        + ++S DS  +   S   
Sbjct: 1373 FSPDSEVLVLSS---LNRTIWLWDIKSREQLQISKGYLDYTYNLAFSLDSEILASGS--- 1426

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            G   + +  +   +  +             +S    ++A      +   +    K   Q 
Sbjct: 1427 GDGTIQLWDTKSREPLQTLDSYLEWVNTMAFSLDSKILALGS-DDKTVQLW-CTKSRKQL 1484

Query: 384  RLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            ++L    + +    +SP  + L       GD   +L+
Sbjct: 1485 QILEGHLARVNTVAFSPDSKILA---SGSGDKTVRLW 1518



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 94/257 (36%), Gaps = 44/257 (17%)

Query: 108  AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
            +++L +G     G   +    +LWD K  KQ+                      I+ S  
Sbjct: 1335 SEILASGS----GDGTI----QLWDAKSGKQL---------------------QIFDSCL 1365

Query: 168  GEKGDFNSRILFVSESVVS--GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            G    + + ++F  +S V     +  ++ + D        ++       +   FS + + 
Sbjct: 1366 G----WVNTMVFSPDSEVLVLSSLNRTIWLWDIKSREQLQISKGYLDYTYNLAFSLDSEI 1421

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +A  + D      + L DT+     + + ++   +    FS + K   +    D+ + ++
Sbjct: 1422 LASGSGDG----TIQLWDTKSREPLQTLDSYLEWVNTMAFSLDSKILAL-GSDDKTVQLW 1476

Query: 286  SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                +    + L   L    + ++SPDS  +   S   G + + +  +    Q +I +  
Sbjct: 1477 CTKSR-KQLQILEGHLARVNTVAFSPDSKILASGS---GDKTVRLWCTKSGKQLQILEGH 1532

Query: 346  EASYFDPVWSPQGDLIA 362
                    +SP G+++A
Sbjct: 1533 LDWVRAVTFSPDGEILA 1549


>gi|301167624|emb|CBW27207.1| putative protease [Bacteriovorax marinus SJ]
          Length = 1070

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 72/199 (36%), Gaps = 20/199 (10%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                  RI + +  I   + S +G + + +   +   DIY    +     RLT T  + 
Sbjct: 32  ETSSLATRITSEKGNITGLKVSPDGSKIIYTSTLEGGRDIYLCSSEGGIPTRLTFTQGMK 91

Query: 305 ISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWS----- 355
           I  S+  D  +++  S  E     +  LY +         +S    A+YF+   +     
Sbjct: 92  I-LSW-RDQDEVICSSSHEHFTARETLLYSLDLKTKKLTPLS-LGPATYFEQAHTGEQVL 148

Query: 356 --PQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD 411
               GD   + ++ G     I + +   + +++L    +NL  P        + F    +
Sbjct: 149 GKNNGDPARWKRYRGGTAGTIWLKEVGKNFKQILKNIPTNLTCPKIIND--RIFFISDHE 206

Query: 412 GDTGSKLYSIDLNGRNETL 430
           G     +YS+ L GR    
Sbjct: 207 G--IGNIYSVTLKGRGLKR 223



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  K+ Y +   E    +YL  +     P R+   + M +   +  +    + S   +
Sbjct: 53  SPDGSKIIYTS-TLEGGRDIYLCSSE-GGIPTRLTFTQGMKIL-SWR-DQDEVICSSSHE 108

Query: 280 EAMD----IYSVDLQSNATERLTNTLFINISASYS-------PDSSQIVFESDREGKEQL 328
                   +YS+DL++     L+         +++        +     ++  R G    
Sbjct: 109 HFTARETLLYSLDLKTKKLTPLSLGPATYFEQAHTGEQVLGKNNGDPARWKRYRGGTAGT 168

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             ++  G + K+I ++   +   P      D I F         I  +   G   +    
Sbjct: 169 IWLKEVGKNFKQILKNIPTNLTCPKI--INDRIFFISDHEGIGNIYSVTLKGRGLKRHTH 226

Query: 389 DSNLQAPTWSPSGRSLIFSR 408
           +      ++S     ++FS 
Sbjct: 227 EQEFYVRSFSHYEGIIVFSS 246



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 2/75 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G +       D+ +    ++  S+   R+T+          SPD S+I++ S  EG   +
Sbjct: 14  GNKLYFI--CDDDIWCQKLNETSSLATRITSEKGNITGLKVSPDGSKIIYTSTLEGGRDI 71

Query: 329 YVMQSNGSDQKRISQ 343
           Y+  S G    R++ 
Sbjct: 72  YLCSSEGGIPTRLTF 86



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 75/206 (36%), Gaps = 14/206 (6%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGKRALISVQKDE 280
           + Q++A  +           +      AP RIG+  S    PR  +   K  + S++ D 
Sbjct: 293 DAQRIAINSRGK------LFVIPPWGGAPTRIGSPSSRYKLPRVLNLKKKEVICSLKLDA 346

Query: 281 AMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             + + V  +L+SN    +        +   SP+  + +  +    + +L+++  +   +
Sbjct: 347 ENEEHLVFFNLESNKETSVFEKEDWGKTFELSPNPVEPI-IALANNRNELFIINIDKKSR 405

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAIGVMKK-DGSQERLLVEDSNLQA 394
           K+I         D  WS  G  + + K         +I V     G   R +    +  +
Sbjct: 406 KKIEDGVGDHIRDLSWSKDGKYLTYIKSDSPSEVDKSIRVYDLKKGKTHRTINNIVSDTS 465

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYS 420
           P +S  G  L F   ++ +     Y 
Sbjct: 466 PIFSDCGNYLYFIGAREFNPCPSEYL 491



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 64/194 (32%), Gaps = 24/194 (12%)

Query: 155 AHTISDDIYQSIT--GEKGDFNSRIL-----FVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           A  I+ +    +      G   +RI      +    V++   K  +C +  D  N  +L 
Sbjct: 294 AQRIAINSRGKLFVIPPWGGAPTRIGSPSSRYKLPRVLNLKKKEVICSLKLDAENEEHLV 353

Query: 208 PSR----------DQILFEPRF--SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                        ++  +   F  SPN  +   A  ++ + L +  +D +  +  +    
Sbjct: 354 FFNLESNKETSVFEKEDWGKTFELSPNPVEPIIALANNRNELFIINIDKKSRKKIED--G 411

Query: 256 FRSMILAPRFSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPD 312
               I    +S +GK          +     I   DL+   T R  N +  + S  +S  
Sbjct: 412 VGDHIRDLSWSKDGKYLTYIKSDSPSEVDKSIRVYDLKKGKTHRTINNIVSDTSPIFSDC 471

Query: 313 SSQIVFESDREGKE 326
            + + F   RE   
Sbjct: 472 GNYLYFIGAREFNP 485


>gi|258577207|ref|XP_002542785.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237903051|gb|EEP77452.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 619

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 87/254 (34%), Gaps = 28/254 (11%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL----RV 239
              G + + + V++ +  + + +    D     P+FSP+ + + +  +D  D+     +V
Sbjct: 115 REDGEVLDRIVVINTETKDAKVVVEGADFFA-HPKFSPDGRHICWTQWDHPDMPWTGSQV 173

Query: 240 YLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           Y+ D        +      +  S +  PR+S +G       +      +Y  DL S   E
Sbjct: 174 YVADWADGSVANKTHVAGKSLSSAVCQPRWSPDGT-LWFVDEPAGMWQLYRYDLTSRRVE 232

Query: 296 RLTNTLFINIS---ASY--------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
            +    +  +    A +          D S +V    + G   + V          +   
Sbjct: 233 YVRIEGYTAVEMGKAEWFLGNSTYGFLDESALVLAYTKSGATGIIVYDITTGSATELPLG 292

Query: 345 KEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAP--TWSP 399
                F+ +   SP    +          A+ ++       ++LL   + +  P   +SP
Sbjct: 293 IVHVEFNGIRCVSPT-SFVVTGGTPTAPSAVYLVDITKPGAKQLLKSSTAIDLPLEIFSP 351

Query: 400 SGRSLIFSRKKDGD 413
             +S+ F R    D
Sbjct: 352 P-QSITFPRTHGSD 364


>gi|261342274|ref|ZP_05970132.1| oligogalacturonate lyase [Enterobacter cancerogenus ATCC 35316]
 gi|288315614|gb|EFC54552.1| oligogalacturonate lyase [Enterobacter cancerogenus ATCC 35316]
          Length = 391

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 73/210 (34%), Gaps = 22/210 (10%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           P  +   R+      F ++G   L + + D   + Y +DL++    +LT     N    +
Sbjct: 28  PPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHWNYYLLDLKNAEAVQLTEGAGDNTFGGF 87

Query: 310 -SPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPV------------- 353
            SPD +   +  +     ++ +      +  R+        ++                 
Sbjct: 88  LSPDDTSFYYVKNDRTLLEVNLKTLAEREVYRVPDEWVGYGTWVANSDCTKLVGIEIDKA 147

Query: 354 -WSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSP-SGRSLIFSR 408
            W+P  D   F  F  +     +++ D   G    +L E   L  P + P    ++ F  
Sbjct: 148 DWTPLNDWKIFHDFFHKGPHCRLLRVDLKTGESTTILDEKIWLGHPIYRPFDDNTVAFCH 207

Query: 409 KKDGDT-GSKLYSIDLNGRNETLINTPAYA 437
           +   D   ++++ ++ +G N   +   A  
Sbjct: 208 EGPHDLVDARMWLVNEDGSNVRKVKAHAEG 237



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/237 (10%), Positives = 66/237 (27%), Gaps = 43/237 (18%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           ++P      +  +  +      L           I + +  +  P +   +        +
Sbjct: 149 WTPLNDWKIFHDFFHKGPHCRLLRVDLKTGESTTILDEKIWLGHPIYRPFDDNTVAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ V+   +   ++             + PD S +++ S  +G++   +  
Sbjct: 209 GPHDLVDARMWLVNEDGSNVRKVKAHAEGESCTHEFWVPDGSALIYVSYLKGQQGRTISR 268

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--------------------------FT 364
                   + + Q    S+   + +  G L+                           F 
Sbjct: 269 FNPESGVNEEVMQMPACSHL--MSNADGTLLVGDGSGTPVDVKDTGGYTIDNDPYLYGFN 326

Query: 365 KFSGEKFAIGVMK---KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                 F I          +  R +        P+++P  +++++S  KDG     +
Sbjct: 327 VAEKAWFRIARHDTSWATVANSRQVTHP----HPSFTPDDKAVLYSSDKDGKPALYI 379


>gi|122890342|emb|CAL34068.1| hypothetical protein [Streptomyces cinnamonensis]
          Length = 429

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 72/231 (31%), Gaps = 30/231 (12%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDI-----LRVYLMDTRIDRAPKRIGNFRSMILA 262
              +    +P  S + + VA+ +     +            T      KR+       + 
Sbjct: 68  TGGNHHSVDPTVSADGRVVAFMSSATNLVSGTVMPNNVFYRTAPGAPLKRVELPGESTML 127

Query: 263 PRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASY-----SPDSSQ 315
           PR S +G     +      +   ++++DL++   E +   L     A++     S D   
Sbjct: 128 PRVSDSGHHLTFTSYSATTQKYSVHAMDLRTGRIEPVAPALDGGYRATFGAAPLSADGRY 187

Query: 316 IVFE----SDREGKEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFT----- 364
           + F     +D  G  +  +M  +   Q+  R          D   S  G  +A+      
Sbjct: 188 VAFVAKTAADENGMSRCRIMLLDRRTQQLWRAGPSTNRDCQDISMSADGRKVAYRVGYSG 247

Query: 365 KFSGEKFAIGVMKKDGSQERL-------LVEDSNLQAPTWSPSGRSLIFSR 408
               ++  I V  +   +             D +  AP  S  G  + F+ 
Sbjct: 248 PSDDDQADILVYDRVTGRTMQADVTHNGAPADRSALAPVLSADGSKVGFNS 298



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 57/205 (27%), Gaps = 25/205 (12%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVD-------LQSNATERLTNTLFINISASYSP 311
             + P  S++G+           +    +              +R+       +    S 
Sbjct: 73  HSVDPTVSADGRVVAFMSSATNLVSGTVMPNNVFYRTAPGAPLKRVELPGESTMLPRVSD 132

Query: 312 DSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASY----FDPVWSPQGDLIAFTK 365
               + F S     ++  V  M       + ++   +  Y         S  G  +AF  
Sbjct: 133 SGHHLTFTSYSATTQKYSVHAMDLRTGRIEPVAPALDGGYRATFGAAPLSADGRYVAFVA 192

Query: 366 FS----GEKFAIGVMKKDGSQERL----LVEDSNLQAPTWSPSGRSLIFSRKKDG---DT 414
            +           +M  D   ++L       + + Q  + S  GR + +     G   D 
Sbjct: 193 KTAADENGMSRCRIMLLDRRTQQLWRAGPSTNRDCQDISMSADGRKVAYRVGYSGPSDDD 252

Query: 415 GSKLYSID-LNGRNETLINTPAYAS 438
            + +   D + GR      T   A 
Sbjct: 253 QADILVYDRVTGRTMQADVTHNGAP 277



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 54/145 (37%), Gaps = 22/145 (15%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-------GSDQKRISQDKEASYF 350
           T     ++  + S D   + F S         VM +N       G+  KR+    E++  
Sbjct: 68  TGGNHHSVDPTVSADGRVVAFMSSATNLVSGTVMPNNVFYRTAPGAPLKRVELPGESTML 127

Query: 351 DPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGS--QERLLVEDSNLQAPTW-----SPSG 401
            P  S  G  + FT +S    K+++  M       +      D   +A T+     S  G
Sbjct: 128 -PRVSDSGHHLTFTSYSATTQKYSVHAMDLRTGRIEPVAPALDGGYRA-TFGAAPLSADG 185

Query: 402 RSLIF----SRKKDGDTGSKLYSID 422
           R + F    +  ++G +  ++  +D
Sbjct: 186 RYVAFVAKTAADENGMSRCRIMLLD 210



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 76/225 (33%), Gaps = 31/225 (13%)

Query: 176 RILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            + FV+++    +G+ +  + ++DR    +    PS ++   +   S + +KVAY     
Sbjct: 187 YVAFVAKTAADENGMSRCRIMLLDRRTQQLWRAGPSTNRDCQDISMSADGRKVAYRVGYS 246

Query: 234 E----DILRVYLMDTRIDRAPKRIGNFRS-----MILAPRFSSNGKRALISV-------- 276
                D   + + D    R  +              LAP  S++G +   +         
Sbjct: 247 GPSDDDQADILVYDRVTGRTMQADVTHNGAPADRSALAPVLSADGSKVGFNSVATNLVPG 306

Query: 277 -----QKDEAMDIYSVDLQSNATERLTNTLFINISAS--YSPDSSQIVF-ESDREGKE-Q 327
                    + + +  DL++   +R       +++     S D S+++   +D  G    
Sbjct: 307 TDPNGDTGTSWNAFVRDLRTGTLQRYDGHSPTDLTQVSDLSADGSKLLLNTADMNGTTLG 366

Query: 328 LYVMQSNGSDQKRISQDKEA---SYFDPVWSPQGDLIAFTKFSGE 369
           L +       ++ +S   +    +      S       F+ +   
Sbjct: 367 LILRDPRTGHEELLSPGHDGRPVTVARAALSTDESTAVFSSYHPG 411


>gi|189230286|ref|NP_001121467.1| hypothetical protein LOC100158563 [Xenopus (Silurana) tropicalis]
 gi|183985714|gb|AAI66234.1| LOC100158563 protein [Xenopus (Silurana) tropicalis]
          Length = 774

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 80/229 (34%), Gaps = 12/229 (5%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             SG+ +  +     +   ++      +       +SP+ Q +        D  +V + D
Sbjct: 219 GCSGLGQLLVWEWQSESYVLKQQGHFNNMGAL--SYSPDGQHIV----TGGDDGKVKVWD 272

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T          +  S ++A  F+S+G + ++S   D  +  +S+ L+       T+    
Sbjct: 273 TSSGFCFVTFTDHTSSVMAVTFASSG-QVILSASLDGTVRAFSL-LRYRNFRTFTSPKPA 330

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S   + D S  +  +  +   ++YV          +    E       ++P   ++A 
Sbjct: 331 QFS-CLAVDGSGEIVCAGAQDSYEVYVWSMQTGRLLDVLSGHEGPISCVAFNPWRSVLAT 389

Query: 364 TKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKD 411
             +        ++    + E L L  D+   A T+ P GR +  +    
Sbjct: 390 ASWDKTVRLWDMVDSWRTTETLNLTSDAL--AVTFRPDGREIAVASMDG 436


>gi|229041066|ref|ZP_04189828.1| Acylamino-acid-releasing enzyme [Bacillus cereus AH676]
 gi|228727238|gb|EEL78433.1| Acylamino-acid-releasing enzyme [Bacillus cereus AH676]
          Length = 654

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 93/293 (31%), Gaps = 45/293 (15%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++        +N + + ++D     Y   + D     P +SP+ + +AY +    
Sbjct: 32  VAFVKKTADWKDNTYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDARCIAYLS-PVG 89

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQS-- 291
           D      + +       +I + +  +   ++   GK      Q  E  ++    DL    
Sbjct: 90  DGKNQIFVKSLDGYREFQITDEKEGVSTFKWGPTGKGLYYVTQSKECEEMKKRKDLYGDF 149

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  +     +I I           V +SD +  E   V         +++  K+  
Sbjct: 150 QHIGKEHQNNCLYYIEIE---------KVIQSDTDEHENRVVY--------QLTDGKDFH 192

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWSPSG 401
             +   S  G  + F               + ++     + + L V+     +  +SP G
Sbjct: 193 IHEFDISNDGKKVVFMATPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPDG 252

Query: 402 RSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
             + ++         R    D+  ++Y I+  G     +        P QW  
Sbjct: 253 SEICYTASIREKGYYRNHIQDSTLEIYDIN-TGELIQPLTDFDSTVMPLQWTA 304


>gi|298528985|ref|ZP_07016388.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Desulfonatronospira thiodismutans ASO3-1]
 gi|298510421|gb|EFI34324.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Desulfonatronospira thiodismutans ASO3-1]
          Length = 690

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 47/115 (40%), Gaps = 4/115 (3%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS- 381
            G +  Y+        + +  D          SP G+ IAF +       I V  ++ S 
Sbjct: 28  SGNKLDYLEDLPPLLDRELFFDDPEMDSA-TISPDGEKIAFRQKFQGVMNIWVKDREDSF 86

Query: 382 -QERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            + R L +D + ++   WS    ++++++ K GD    LY++D  G      + P
Sbjct: 87  EEARPLTDDEHPIRMFFWSRDSENILYAQDKQGDENFNLYAVDPAGETAEDADVP 141



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 81/229 (35%), Gaps = 33/229 (14%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERL 297
           YL D       +   +   M  A   S +G++     +    M+I+  D + +      L
Sbjct: 34  YLEDLPPLLDRELFFDDPEMDSA-TISPDGEKIAFRQKFQGVMNIWVKDREDSFEEARPL 92

Query: 298 TNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQK-------RISQDKEAS 348
           T+         +S DS  I++  D++G     LY +   G   +       R   D E  
Sbjct: 93  TDDEHPIRMFFWSRDSENILYAQDKQGDENFNLYAVDPAGETAEDADVPESRALTDYEGV 152

Query: 349 YFDPVWSPQGD----LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--GR 402
               +  P+      ++A          +  +     +  L+ ++ +    +W     GR
Sbjct: 153 QTRVIARPEEKPEYVVVAVNNRDPALHDVYKIHVQSGERELIFKNEHNIT-SWKVDEYGR 211

Query: 403 SLIFSRKKDGDTGSKL-----------YSIDLNGRNETLINTP-AYASD 439
            + F+ ++  D G+++           Y +D  G +  + + P  Y +D
Sbjct: 212 -IRFASRETPDGGTEILKLEEGELEQVYRVDF-GESARIAHLPRGYDND 258


>gi|119499063|ref|XP_001266289.1| WD domain protein [Neosartorya fischeri NRRL 181]
 gi|119414453|gb|EAW24392.1| WD domain protein [Neosartorya fischeri NRRL 181]
          Length = 614

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 70/219 (31%), Gaps = 18/219 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  ++  +FS +  K+            VY+ DT      +++      +    +S
Sbjct: 292 LSQHSDEVWYCQFSHDGSKLV----TAGRDRHVYIYDTTNFSVYRQLEKHEEGVAHVSWS 347

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +  +  I+  +D+   ++SV+        + +      +A ++ D    V  +  +   
Sbjct: 348 PDDSKL-ITCSQDKKARVWSVE-TGRCLLTINHHRQPVTAAVWAADGESFV-TASLDLSS 404

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL- 385
           QL      G      +        D   +P G  +           I V      +E   
Sbjct: 405 QLCHWSMRGD--PLYTWHGGFRVQDCAITPDGRRLIAADVEE---KIHVYDFATHEEEYC 459

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           L   S   + + S   R ++ +  +      ++  IDL+
Sbjct: 460 LALKSKPTSVSVSRDSRYMLVNLSEG-----QIQLIDLD 493



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 90/278 (32%), Gaps = 25/278 (8%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI-------YQSITGEKGD 172
             +RL +   L +   + QI    + ++       +  + D          +        
Sbjct: 243 PNNRLAI---LLNHVKQNQINRCLYHNTATPPSLYSDHMCDRNDFPLRTGVELSQHSDEV 299

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +  +       +V+      + + D    ++       ++ +    +SP+  K+   + D
Sbjct: 300 WYCQFSHDGSKLVTAGRDRHVYIYDTTNFSVYRQLEKHEEGVAHVSWSPDDSKLITCSQD 359

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +      +      R    I + R  + A  ++++G+   ++   D +  +    ++ +
Sbjct: 360 KK----ARVWSVETGRCLLTINHHRQPVTAAVWAADGES-FVTASLDLSSQLCHWSMRGD 414

Query: 293 ATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                T      +   + +PD  +++  +D E K  +Y   ++  +     + K  S   
Sbjct: 415 PL--YTWHGGFRVQDCAITPDGRRLI-AADVEEKIHVYDFATHEEEYCLALKSKPTSV-- 469

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              S     +      G    I ++  D ++     + 
Sbjct: 470 -SVSRDSRYMLVNLSEG---QIQLIDLDTTEVIRRFQG 503


>gi|172064035|ref|YP_001811686.1| coagulation factor 5/8 type domain-containing protein [Burkholderia
           ambifaria MC40-6]
 gi|171996552|gb|ACB67470.1| coagulation factor 5/8 type domain protein [Burkholderia ambifaria
           MC40-6]
          Length = 470

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 14/213 (6%)

Query: 225 KVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDE 280
           K+ Y +Y    D      +     R   ++      I  P    FS +GK        + 
Sbjct: 46  KLVYHSYVKYGDGTSQLFLYDFSARTLTQLSKSSWGITDPMNGVFSPDGKWLAFMGISNG 105

Query: 281 AMDIYSVDL-QSNATERLTNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQSNG-- 335
           A +++ + L        LTN+     N    ++ D   +VF+ + + K+      S G  
Sbjct: 106 AWNVFMLQLGAGTPPVNLTNSTGATRNEDPKFAADGKTLVFKQNGDVKQGTLSYTSAGPV 165

Query: 336 -SDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            +    ++     S Y  P  +P    + +   +G    +           +    + LQ
Sbjct: 166 FTSVVSLTNAPAGSEYSMPFLAPDASAVYYATGTGSNMGLMKRTIATGATAVFDHPAGLQ 225

Query: 394 --APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              P     G  + ++R KD     ++Y+   +
Sbjct: 226 TYYPIVRRDG-MVFYARWKDSGGADQIYAKTAD 257



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 82/284 (28%), Gaps = 59/284 (20%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSP 221
           QS     G    ++++    V  G   + L + D     +  L+ S   I       FSP
Sbjct: 34  QSNASFPGALTGKLVY-HSYVKYGDGTSQLFLYDFSARTLTQLSKSSWGITDPMNGVFSP 92

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKD 279
           + + +A+    +     V+++       P  + N         P+F+++GK  +     D
Sbjct: 93  DGKWLAFMGISNG-AWNVFMLQLGAGTPPVNLTNSTGATRNEDPKFAADGKTLVFKQNGD 151

Query: 280 EAMDIYSVDLQS---NATERLTNTLF--INISASYSPDSSQIVFES-------------- 320
                 S         +   LTN            +PD+S + + +              
Sbjct: 152 VKQGTLSYTSAGPVFTSVVSLTNAPAGSEYSMPFLAPDASAVYYATGTGSNMGLMKRTIA 211

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQDKE-- 346
                                           D  G +Q+Y   ++ +         +  
Sbjct: 212 TGATAVFDHPAGLQTYYPIVRRDGMVFYARWKDSGGADQIYAKTADPASTPSALPINDCM 271

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++  DP      + + F+  +   + + V      Q   L +  
Sbjct: 272 SNNSDPAPVSGTNYVFFSSTTAGGYQLYVGDVTTGQRWSLSQFG 315


>gi|12846941|dbj|BAB27371.1| unnamed protein product [Mus musculus]
          Length = 356

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 92/256 (35%), Gaps = 20/256 (7%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           D   +       D  +R+ F   +    SG + ++L +      +  Y     +  +   
Sbjct: 7   DPSLERHFKGHRDAVTRVDFSLNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHNDAVTCV 66

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A  + D    +R+++ + + +    R     + + +  F S+G+  + +  
Sbjct: 67  NFSPSGHLLASGSRD--KTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQSLV-TAS 121

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + ++S   Q      LT  +     A +SPD   IV  SD    + + +      +
Sbjct: 122 DDKTVKVWSTHRQ-RFLFSLTQHINWVRCAKFSPDGRLIVSASD---DKTVKLWDKTSRE 177

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQ 393
                 +         + P G  IA          +     D    RLL    +  + + 
Sbjct: 178 CIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTV-KVW----DARTHRLLQHYQLHSAAVN 232

Query: 394 APTWSPSGRSLIFSRK 409
           A ++ PSG  LI +  
Sbjct: 233 ALSFHPSGNYLITASS 248


>gi|288802401|ref|ZP_06407840.1| OmpA family protein [Prevotella melaninogenica D18]
 gi|288334929|gb|EFC73365.1| OmpA family protein [Prevotella melaninogenica D18]
          Length = 672

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 55/159 (34%), Gaps = 22/159 (13%)

Query: 299 NTLFINISASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQK-------RISQDKEAS 348
           NT     + ++S D  ++      +D        +  SN SD          IS+D  +S
Sbjct: 210 NTEADEGTPAFSVDGREMYITQCLTDPSNPRYAQISVSNRSDAAWGKANKLEISRDTLSS 269

Query: 349 YFDPVWSPQGDLIAFTKF---SGEKFAIGVMKKDGSQE-------RLLVEDSNLQAPTWS 398
           +  P  SP G+ + FT           I  ++  G            +    + + PT+ 
Sbjct: 270 FAHPAVSPDGNWLYFTSDMPGGKGGLDIWRVRLTGGTTGGVENLGEPINTPGDEEFPTFR 329

Query: 399 PSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETLINTPAY 436
           P+G  L FS     G  G  ++   +       +  P Y
Sbjct: 330 PNGD-LYFSSNGHGGLGGLDIFIAKVGNDRRYHLEHPGY 367



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 39/118 (33%), Gaps = 20/118 (16%)

Query: 344 DKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKD----GSQERLLVED---SN 391
           + EA    P +S  G  +  T+      +     I V  +     G   +L +     S+
Sbjct: 210 NTEADEGTPAFSVDGREMYITQCLTDPSNPRYAQISVSNRSDAAWGKANKLEISRDTLSS 269

Query: 392 LQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNE-------TLINTPAYASDPQ 441
              P  SP G  L F+     G  G  ++ + L G            INTP     P 
Sbjct: 270 FAHPAVSPDGNWLYFTSDMPGGKGGLDIWRVRLTGGTTGGVENLGEPINTPGDEEFPT 327



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 44/148 (29%), Gaps = 20/148 (13%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------RI 253
           AN   ++         P  SP+   + + +        + +   R+              
Sbjct: 257 ANKLEISRDTLSSFAHPAVSPDGNWLYFTSDMPGGKGGLDIWRVRLTGGTTGGVENLGEP 316

Query: 254 GNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERL------TNTLFIN 304
            N       P F  NG     S         +DI+   + ++    L       N+   +
Sbjct: 317 INTPGDEEFPTFRPNGD-LYFSSNGHGGLGGLDIFIAKVGNDRRYHLEHPGYPLNSQGDD 375

Query: 305 ISASYSPDSSQIVFESDRE---GKEQLY 329
              ++    ++  F S+R    G + +Y
Sbjct: 376 FGMTFEGIHNRGFFSSNRGDGRGWDHIY 403


>gi|238064064|ref|ZP_04608773.1| WD-repeat protein [Micromonospora sp. ATCC 39149]
 gi|237885875|gb|EEP74703.1| WD-repeat protein [Micromonospora sp. ATCC 39149]
          Length = 1159

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 52/151 (34%), Gaps = 10/151 (6%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +F+P+   +A A     D   +   DTR      R+ +    + A   + +G   LI+ +
Sbjct: 1008 KFAPDGSWLATAA----DNGTIRTWDTRSGLQRTRVRSRARHLSAFTTTPDGDLLLIAGR 1063

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                      D +      LT       + + +PD   +   S       +++   +   
Sbjct: 1064 FGGVFATGVADKRIGKE--LTGHPDQPSAMAVTPDGRWVAGCSASG---AVWIWDFHRGP 1118

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
               +++  + +     WSP G  +     SG
Sbjct: 1119 VVAMTRV-DGNLIACAWSPDGRHLYAGGSSG 1148



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 72/193 (37%), Gaps = 23/193 (11%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              SP+   +A A   D+ ++ V+ + T +++    +      + A +F+ +G     +  
Sbjct: 968  AVSPDGAWIAIA---DDHVVTVHKVSTGLEQCHFALV---GRLHALKFAPDGSWLATAA- 1020

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              +   I + D +S        +   ++SA + +PD   ++      G     V      
Sbjct: 1021 --DNGTIRTWDTRSGLQRTRVRSRARHLSAFTTTPDGDLLLIAGRFGGVFATGVAD---- 1074

Query: 337  DQKRISQDKEASYFDP---VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNL 392
              KRI ++       P     +P G  +A    SG   A+ +          +   D NL
Sbjct: 1075 --KRIGKELTGHPDQPSAMAVTPDGRWVAGCSASG---AVWIWDFHRGPVVAMTRVDGNL 1129

Query: 393  QAPTWSPSGRSLI 405
             A  WSP GR L 
Sbjct: 1130 IACAWSPDGRHLY 1142



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 92/296 (31%), Gaps = 25/296 (8%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH  +D +   +  ++ D+      +  +  +  + ++  + D   + +       D   
Sbjct: 523 AHACADILLDRVANDR-DWGGPAKRIIAARTTPRLVSTWPLPDLPSSRLLRTLAGHDHFA 581

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
                +P+   V        D + V   D    R   ++    ++      + +G  A  
Sbjct: 582 SALAVTPDGDTVV-----AADHISVLTWDAATGRLRTKVDGGGTVQ---ALAPDG--ATF 631

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             +           L      R+   L+     + +PD+S +   +      +   +   
Sbjct: 632 VARSLFGTVTLRSTLTGRQLARIGRRLWRLNEVAIAPDNSWLATLTFH----RFVRIWDT 687

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNL 392
            + ++R S     S      SP    IA     G  +A+ +      +    +      +
Sbjct: 688 TTGRQRSSLGNLFSIRHLAVSPDSTRIA---TFGSGYAVQLWDAATGRRILGIPTPSQFI 744

Query: 393 QAPTWSPSGRSLIFSRKKDGD---TGSKLYSIDLNG-RNETLINTPAYASDPQWVG 444
                +P G  L  +   DG      +    +   G R+E  I+  A + D  W+ 
Sbjct: 745 TTVAITPDGSGLA-TGDIDGTVHIRDTATGRVRATGPRHEGWIDQIAVSGDGAWIA 799



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 50/337 (14%), Positives = 108/337 (32%), Gaps = 64/337 (18%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-VSG 187
            +LWD    ++I+G                        I        +  +    S   +G
Sbjct: 724  QLWDAATGRRILG------------------------IPTPSQFITTVAITPDGSGLATG 759

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             I  ++ + D     +R   P  +  + +   S +   +A A +D      + + +    
Sbjct: 760  DIDGTVHIRDTATGRVRATGPRHEGWIDQIAVSGDGAWIATAGHDR----TIRVWNLADV 815

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            R    +      +     + +G   + S  +D  + ++  D ++      T++     + 
Sbjct: 816  RRGTVLHGHLRNVRVVALAPDGSWLV-SGSEDATIRVW--DNRTRTDRVPTSSGTPVAAM 872

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + + + + +V    R      ++    G +   IS+   A       +P GD +A     
Sbjct: 873  ALAANGTCLVIA--RSDYGVRFLDPRTGGETAAISRKSPA----VAAAPNGDWVAIA--D 924

Query: 368  GEKFAIGVMKKDGSQERL---------------LVEDSNLQAPTWSPSGRSLIFS----- 407
            G    +  +  D  + RL               +V  ++++A   SP G  +  +     
Sbjct: 925  GSDVLLWDVGADKPRARLHSHREDYARPPGRPPVVHRASIRAVAVSPDGAWIAIADDHVV 984

Query: 408  RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                  TG +     L GR   L     +A D  W+ 
Sbjct: 985  TVHKVSTGLEQCHFALVGRLHAL----KFAPDGSWLA 1017


>gi|29832512|ref|NP_827146.1| hypothetical protein SAV_5969 [Streptomyces avermitilis MA-4680]
 gi|29609631|dbj|BAC73681.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 340

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 15/173 (8%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F++R   V               + +DG        + D   +   F+ +  +  YAT  
Sbjct: 165 FSTRAAIVDTRTGKLTPSLEAYRIVKDG----RTYRAADVNFWGVTFAAD-DRAFYATLA 219

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEAMDIYSV 287
                 +     R D   + +    + +  P  S +G           + KD    +Y +
Sbjct: 220 TRGRTYL----VRGDLHTRTVTTLHTNVECPSLSPDGTHIAYKKRVKGLPKDAPWHLYVL 275

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           DL++     L     ++  A +  D   +V+    +    LY + S+G+D  R
Sbjct: 276 DLRTMRETALAEPRSVDDQAVW-RDDQTVVYALPGDYGADLYSLPSDGTDTPR 327



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 65/211 (30%), Gaps = 33/211 (15%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDE--------AMDIYSVDLQSNATE------RL--- 297
           +   +    R S +G+ A  +             +     VD ++          R+   
Sbjct: 132 DVPGIPSRARVSPSGRFAAWTAFVGGDSYAGTNFSTRAAIVDTRTGKLTPSLEAYRIVKD 191

Query: 298 -TNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                  +++    +++ D           G+  L           R       +   P 
Sbjct: 192 GRTYRAADVNFWGVTFAADDRAFYATLATRGRTYLVRGDL----HTRTVTTLHTNVECPS 247

Query: 354 WSPQGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            SP G  IA+ K          + + V+     +E  L E  ++         ++++++ 
Sbjct: 248 LSPDGTHIAYKKRVKGLPKDAPWHLYVLDLRTMRETALAEPRSVDDQAVWRDDQTVVYAL 307

Query: 409 KKDGDTGSKLYSIDLNGR-NETLINTPAYAS 438
              GD G+ LYS+  +G      + T   + 
Sbjct: 308 --PGDYGADLYSLPSDGTDTPRRLLTAGVSP 336



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 54/162 (33%), Gaps = 25/162 (15%)

Query: 301 LFINISASYSPDSSQIVFESDREG--------KEQLYVMQSNGS------DQKRISQDKE 346
             I   A  SP      + +   G          +  ++ +         +  RI +D  
Sbjct: 134 PGIPSRARVSPSGRFAAWTAFVGGDSYAGTNFSTRAAIVDTRTGKLTPSLEAYRIVKDGR 193

Query: 347 A------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                  +++   ++      AF      +    +++ D     +    +N++ P+ SP 
Sbjct: 194 TYRAADVNFWGVTFAADDR--AFYATLATRGRTYLVRGDLHTRTVTTLHTNVECPSLSPD 251

Query: 401 GRSLIFSRKKDG---DTGSKLYSIDLNGRNETLINTPAYASD 439
           G  + + ++  G   D    LY +DL    ET +  P    D
Sbjct: 252 GTHIAYKKRVKGLPKDAPWHLYVLDLRTMRETALAEPRSVDD 293


>gi|118397031|ref|XP_001030851.1| hypothetical protein TTHERM_01006590 [Tetrahymena thermophila]
 gi|89285167|gb|EAR83188.1| hypothetical protein TTHERM_01006590 [Tetrahymena thermophila SB210]
          Length = 2418

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 86/244 (35%), Gaps = 21/244 (8%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              S      + ++  +   I  +    D+I     FSP+ + +A  + D+       + D
Sbjct: 1808 TGSYDNTCRIWIVQNELQMIDTVLEHTDKISSV-AFSPDSKYLATGSLDN----TCKIWD 1862

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                +  + IG   S I    FS + K    +V +D+   I+ V+ +      +   L  
Sbjct: 1863 LHKLQHVQTIGEHTSGICQVAFSPDNKYLA-TVYQDDTCKIWDVENKFKFVNSIQTGLTC 1921

Query: 304  NISASYSPDSSQIVFESDREGK---EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             +  ++S D + +   S  +       ++ +++     K+I  D         +S  G  
Sbjct: 1922 QV--AFSADGNYLA-TSAYDHSIFIVNIWNIKNGFEHLKKIETDHADQIISLAFSADGQY 1978

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSK 417
            +A            V   +   E+++    +    +   +SP  + L        D   +
Sbjct: 1979 LASGSQDRT---CKVWNVENGFEQVITIQGHTDRISSILFSPDSKYLA---TGSFDNTCQ 2032

Query: 418  LYSI 421
            ++++
Sbjct: 2033 IWNV 2036



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 84/258 (32%), Gaps = 11/258 (4%)

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              +T     F+S+  +++ S  S         ++R+   I+ +   +++I+    FS + 
Sbjct: 1703 HRLTINTLAFSSKGKYLATS--SSDKTCIFQNLEREFQLIKTIDERQNKIVNSIVFSEDG 1760

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            +   Y     +D                 I      I +  FS++GK    +   D    
Sbjct: 1761 K---YFAIGSKDNTCKIFNVENNFEYINTIEAHSDSISSVAFSADGKYLA-TGSYDNTCR 1816

Query: 284  IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            I+ V  +    + +        S ++SPDS  +   S         +   +     +   
Sbjct: 1817 IWIVQNELQMIDTVLEHTDKISSVAFSPDSKYLATGSL---DNTCKIWDLHKLQHVQTIG 1873

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
            +  +      +SP    +A T +  +   I  ++    +    ++        +S  G  
Sbjct: 1874 EHTSGICQVAFSPDNKYLA-TVYQDDTCKIWDVENK-FKFVNSIQTGLTCQVAFSADGNY 1931

Query: 404  LIFSRKKDGDTGSKLYSI 421
            L  S          +++I
Sbjct: 1932 LATSAYDHSIFIVNIWNI 1949



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/272 (14%), Positives = 91/272 (33%), Gaps = 27/272 (9%)

Query: 163  YQSITGEKGDFNSRILFVSESV-----VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFE 216
            ++ +   + D   +I+ ++ S       SG    +  V +  +G             +  
Sbjct: 1953 FEHLKKIETDHADQIISLAFSADGQYLASGSQDRTCKVWNVENGFEQVITIQGHTDRISS 2012

Query: 217  PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              FSP+ + +A  ++D+       + +                +L+  FS +GK    + 
Sbjct: 2013 ILFSPDSKYLATGSFDN----TCQIWNVEEKFQIFNGIQVCDDVLSIAFSVDGKYLA-TG 2067

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQS 333
             +D    ++++D +      L N  + +    S  +SPD+  +          +  +   
Sbjct: 2068 SEDNTCILWNLDYEFKLNISLINDNYFHEQIFSLCFSPDNKYLATT---HTNNKCKIWNL 2124

Query: 334  -NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---ED 389
             NG +     +  +       +S     +A        F   + K +   E + V     
Sbjct: 2125 ENGFELIYTIEGHDIFISSITFSSDAKYLA---TGSGDFTCKIWKVENGFELIKVIDGHT 2181

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               ++  +S  G+ L        D   K+++I
Sbjct: 2182 YQFESIAFSIDGKYLATGSN---DKTCKIWNI 2210



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 94/275 (34%), Gaps = 27/275 (9%)

Query: 157  TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
               + I   +T +           + +    I   ++  +     +++ +       +  
Sbjct: 1910 KFVNSIQTGLTCQVAFSADGNYLATSAYDHSIFIVNIWNIKNGFEHLKKIETDHADQIIS 1969

Query: 217  PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              FS + Q +A  + D     +V+ ++   ++    I      I +  FS + K    + 
Sbjct: 1970 LAFSADGQYLASGSQD--RTCKVWNVENGFEQVIT-IQGHTDRISSILFSPDSKYLA-TG 2025

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFI--NI-SASYSPDSSQIVFESDREGKEQLYVMQS 333
              D    I++V+       ++ N + +  ++ S ++S D   +   S+        +   
Sbjct: 2026 SFDNTCQIWNVE----EKFQIFNGIQVCDDVLSIAFSVDGKYLATGSE---DNTCILWNL 2078

Query: 334  NGSDQKRISQDKEASY----FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
            +   +  IS   +  +    F   +SP    +A T  +  K  I     +   E +    
Sbjct: 2079 DYEFKLNISLINDNYFHEQIFSLCFSPDNKYLATTH-TNNKCKIW--NLENGFELIYTIE 2135

Query: 388  -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              D  + + T+S   + L       GD   K++ +
Sbjct: 2136 GHDIFISSITFSSDAKYLA---TGSGDFTCKIWKV 2167


>gi|288927188|ref|ZP_06421067.1| dipeptidyl-peptidase IV [Prevotella buccae D17]
 gi|288336043|gb|EFC74445.1| dipeptidyl-peptidase IV [Prevotella buccae D17]
          Length = 738

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 51/153 (33%), Gaps = 24/153 (15%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             ++ A  S D  QIV  S + G+++  +     ++ + I+               G  +
Sbjct: 54  GTDLYAQVSADGRQIVSRSFKTGRQRAVLFDVAATEGEHINAFDGYEMDRQ-----GRQL 108

Query: 362 AFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                +   +                +   L E    Q P +SP GR + F R       
Sbjct: 109 LIRTRTEAVYRRSYKAEFYRYDIATRRLSKLSEGGPQQVPAFSPDGRKIAFVRD------ 162

Query: 416 SKLYSIDLNGRNETLINTPAYASD-----PQWV 443
           + L+ +   G +E  + T    ++     P WV
Sbjct: 163 NNLFVV--AGGHERQVTTDGRFNEIINGIPDWV 193



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 56/396 (14%), Positives = 108/396 (27%), Gaps = 73/396 (18%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
           A   +TG +       L  +       D +QI+ + F +     R +   ++    + I 
Sbjct: 42  APAYITG-INPIAGTDLYAQVS----ADGRQIVSRSFKTGR--QRAVLFDVAATEGEHIN 94

Query: 168 GEKGDFNSR----ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              G    R    +L  + +               D A  R    S       P FSP+ 
Sbjct: 95  AFDGYEMDRQGRQLLIRTRTEAVYRRSYKAEFYRYDIATRRLSKLSEGGPQQVPAFSPDG 154

Query: 224 QKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNF-----RSMILAPRFSSNGKRAL 273
           +K+A+   ++         R    D R +     I ++          A  F+++G R  
Sbjct: 155 RKIAFVRDNNLFVVAGGHERQVTTDGRFNEIINGIPDWVNEEEFGFNRAFAFNADGTRLC 214

Query: 274 I---------------------------------------SVQKDEAMDIYSVDLQSNAT 294
                                                   +   +  +  +S DL S   
Sbjct: 215 WLRYDESRVKTYALQLFKGECPEREALADYPGEYSYKYPKAGYDNSVVSAWSCDLGSGEV 274

Query: 295 ERLTNTLFIN-ISASY--SPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            RL   L  +        + DS  + V+  +R             +   R+   +    +
Sbjct: 275 RRLQVPLAADGYMPRIKATADSRAMIVYTMNRHQDTLCLYRADPVTGISRLLISESVPRY 334

Query: 351 DPVWSPQG-----DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP-SGRS- 403
               + +G       I           + +   +G   R  VE  +           R  
Sbjct: 335 VKEEAMEGITVLDRHILVPSDRDGYMHLYLYDMEGRLLRQ-VERGDYDVTAVCGFDERRG 393

Query: 404 -LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            + +   +      ++Y    +GR E L +     S
Sbjct: 394 DVYYQAARLNAHDRQVYVTRADGRTERLTDREGNNS 429



 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 68/458 (14%), Positives = 138/458 (30%), Gaps = 92/458 (20%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKV-ATNSANYSPVSIAFTKFVSIDELGGKVS----EV 68
           K    +   L+ G         + +    S   +P  I     ++  +L  +VS    ++
Sbjct: 9   KFLTLMCATLLAGTSAAREQGRLDLQTITSGELAPAYITGINPIAGTDLYAQVSADGRQI 68

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDS--IPRFQ--DWNSLGAQVLVTGRVIKEGKDRL 124
           VS    RS  F    Q +    +   +   I  F   + +  G Q+L+  R     +   
Sbjct: 69  VS----RS--FKTGRQRAVLFDVAATEGEHINAFDGYEMDRQGRQLLIRTRTEAVYRRSY 122

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           + EF  +D+  R+  + K     P          S D              +I FV ++ 
Sbjct: 123 KAEFYRYDIATRR--LSKLSEGGPQQVPA----FSPD------------GRKIAFVRDNN 164

Query: 185 VSGIIKNSLCVMDRDG-AN------IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +  +       +  DG  N        ++            F+ +  ++ +  YD E  +
Sbjct: 165 LFVVAGGHERQVTTDGRFNEIINGIPDWVNEEEFGFNRAFAFNADGTRLCWLRYD-ESRV 223

Query: 238 RVYLMDTRIDRAPKR--IGNFRS------------MILAPRFSSN---G--KRALISVQK 278
           + Y +       P+R  + ++                +   +S +   G  +R  + +  
Sbjct: 224 KTYALQLFKGECPEREALADYPGEYSYKYPKAGYDNSVVSAWSCDLGSGEVRRLQVPLAA 283

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPD-------------------------- 312
           D  M        S A    T     +    Y  D                          
Sbjct: 284 DGYMPRIKATADSRAMIVYTMNRHQDTLCLYRADPVTGISRLLISESVPRYVKEEAMEGI 343

Query: 313 ---SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFS 367
                 I+  SDR+G   LY+    G   +++ +          +  +   + +   + +
Sbjct: 344 TVLDRHILVPSDRDGYMHLYLYDMEGRLLRQVERGDYDVTAVCGFDERRGDVYYQAARLN 403

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                + V + DG  ER L +     +  +S   R  +
Sbjct: 404 AHDRQVYVTRADGRTER-LTDREGNNSAVFSADLRYFV 440



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 72/241 (29%), Gaps = 49/241 (20%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           A Y        Y  D    R  K        +  P FS +G++      +D  + +    
Sbjct: 116 AVYRRSYKAEFYRYDIATRRLSKLSEGGPQQV--PAFSPDGRKIAFV--RDNNLFV---- 167

Query: 289 LQSNATERLTNTL------------------FINISASYSPDSSQIVFESDREGKEQLYV 330
           +      ++T                       N + +++ D +++ +    E + + Y 
Sbjct: 168 VAGGHERQVTTDGRFNEIINGIPDWVNEEEFGFNRAFAFNADGTRLCWLRYDESRVKTYA 227

Query: 331 MQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL- 385
           +Q    +    +       E SY  P             +     +         + R  
Sbjct: 228 LQLFKGECPEREALADYPGEYSYKYPK----------AGYDNSVVSAWSCDLGSGEVRRL 277

Query: 386 ---LVEDSNLQAPTWSPSGR-SLIFSRKKDGDTGSKLYSID-LNGRNETLI--NTPAYAS 438
              L  D  +     +   R  ++++  +  DT   LY  D + G +  LI  + P Y  
Sbjct: 278 QVPLAADGYMPRIKATADSRAMIVYTMNRHQDTLC-LYRADPVTGISRLLISESVPRYVK 336

Query: 439 D 439
           +
Sbjct: 337 E 337


>gi|256788138|ref|ZP_05526569.1| serine/threonine protein kinase [Streptomyces lividans TK24]
 gi|289772029|ref|ZP_06531407.1| serine/threonine protein kinase [Streptomyces lividans TK24]
 gi|289702228|gb|EFD69657.1| serine/threonine protein kinase [Streptomyces lividans TK24]
          Length = 690

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 67/215 (31%), Gaps = 30/215 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             SP+ + +A       D     L D  R    P+   +         FS +G+      
Sbjct: 454 ALSPDGKWIA-----LGDSAGANLWDLGRRGEDPRAHLSQNLHATDLAFSPDGRTLASVG 508

Query: 277 Q-KDEAMDIYSVDLQSNATERLTNTLFINISAS-------------YSPDSSQIVFESDR 322
              D+   + +   +     RL    +                   +SPD   +     +
Sbjct: 509 DFSDQRYQVENEPAKLWDLTRLDPRPYGQGDPRHNLALEDVVYAVAFSPDGKTLA-TGGQ 567

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G  +L+   + G  +  +S        D  +SP G  +A T    E   +     D   
Sbjct: 568 GGGVRLWDA-ATGRPKATLSHKFVTEARDLAFSPDGSTLAVTA---EGRVLLWNLADRKP 623

Query: 383 ERLLVED-----SNLQAPTWSPSGRSLIFSRKKDG 412
             +L +D     +++    +SP GR L  +    G
Sbjct: 624 SAILADDETGFGADINELAFSPDGRFLAGTTTGGG 658



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/231 (19%), Positives = 83/231 (35%), Gaps = 29/231 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A    D +  L             ++     S ++   FS++GK  +    
Sbjct: 369 AFSPDGETLATGGQDGKVRLWDAATRKVRATLVEKGWYGPSRVVGVTFSADGKTLV---T 425

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +     +   D+      R         S + SPD   I    D  G   L+ +   G D
Sbjct: 426 RTGTHLVGVWDVARRREVRRIEESAY--SLALSPDGKWIA-LGDSAGAN-LWDLGRRGED 481

Query: 338 QK-RISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAI--------GVMKKD------GS 381
            +  +SQ+  A+     +SP G  +A    FS +++ +         + + D      G 
Sbjct: 482 PRAHLSQNLHATDL--AFSPDGRTLASVGDFSDQRYQVENEPAKLWDLTRLDPRPYGQGD 539

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
               L  +  + A  +SP G++L          G +L+     GR +  ++
Sbjct: 540 PRHNLALEDVVYAVAFSPDGKTLA---TGGQGGGVRLWDA-ATGRPKATLS 586



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 51/166 (30%), Gaps = 21/166 (12%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           GDF+ +   V            L        + R+     D +++   FSP+ + +A   
Sbjct: 508 GDFSDQRYQVENEPAKLWDLTRLDPRPYGQGDPRHNLALED-VVYAVAFSPDGKTLA--- 563

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGN-FRSMILAPRFSSNGKRALISVQK--------DEA 281
                   V L D    R    + + F +      FS +G    ++ +         D  
Sbjct: 564 -TGGQGGGVRLWDAATGRPKATLSHKFVTEARDLAFSPDGSTLAVTAEGRVLLWNLADRK 622

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                 D ++           IN   ++SPD   +   +   G  +
Sbjct: 623 PSAILADDETG------FGADIN-ELAFSPDGRFLAGTTTGGGAPE 661


>gi|229015571|ref|ZP_04172566.1| Acylamino-acid-releasing enzyme [Bacillus cereus AH1273]
 gi|229021769|ref|ZP_04178347.1| Acylamino-acid-releasing enzyme [Bacillus cereus AH1272]
 gi|228739516|gb|EEL89934.1| Acylamino-acid-releasing enzyme [Bacillus cereus AH1272]
 gi|228745718|gb|EEL95725.1| Acylamino-acid-releasing enzyme [Bacillus cereus AH1273]
          Length = 654

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 45/115 (39%), Gaps = 11/115 (9%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           SA+ S D   + F        D   +  +++ + +      ++ D +     P+WSP   
Sbjct: 22  SANVSDDGKNVAFVKKSANWEDNTYRNHVWIYEKDKGQSYPLT-DGDIDSTHPLWSPDSK 80

Query: 360 LIAFTKFSGEKFA---IGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G+      I V   DG S+ ++  E+  +    W P G+   +  + 
Sbjct: 81  TIAYLSPGGDGANTNQIFVKSIDGCSEVQMTGEEEGISTFKWDPMGKGFYYVAQS 135



 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 73/225 (32%), Gaps = 48/225 (21%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI---SVQKDEAM---DIYSVDLQSNATERLT 298
           +   + + I +  S+  A   S +GK       S   ++      ++  +     +  LT
Sbjct: 6   KTYLSIEEIISLPSLSSA-NVSDDGKNVAFVKKSANWEDNTYRNHVWIYEKDKGQSYPLT 64

Query: 299 NTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +    +    +SPDS  I + S   D     Q++V   +G  + +++ ++E       W 
Sbjct: 65  DGDIDSTHPLWSPDSKTIAYLSPGGDGANTNQIFVKSIDGCSEVQMTGEEEGISTFK-WD 123

Query: 356 PQGDLIAFTKFSG------------EKFA---------------IGVMKKDGSQER---- 384
           P G    +   S               F                I  +K++  QER    
Sbjct: 124 PMGKGFYYVAQSKECEEIQKRKERYGDFHHVGKEHRNNCLYYIEIEKVKQNDKQERKVSG 183

Query: 385 --LLVEDSNL--QAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDL 423
              L E  +        S  G  ++F      +      LY +D+
Sbjct: 184 LYQLTEGKDFYIHNFDISNDGTKVVFIATPSLNDYMNGDLYILDV 228



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 108/303 (35%), Gaps = 52/303 (17%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T      +S+ +        G   N + V   DG +   +T   + I    ++ P  +  
Sbjct: 71  THPLWSPDSKTIAYLSPGGDGANTNQIFVKSIDGCSEVQMTGEEEGISTF-KWDPMGKGF 129

Query: 227 AYATYDDE---------------------DILRVYLMDTR----IDRAPKRIGNFRSMIL 261
            Y     E                         +Y ++       D+  +++     +  
Sbjct: 130 YYVAQSKECEEIQKRKERYGDFHHVGKEHRNNCLYYIEIEKVKQNDKQERKVSGLYQLTE 189

Query: 262 APRF-------SSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              F       S++G + +     S+      D+Y +D+++   +++     +  S  +S
Sbjct: 190 GKDFYIHNFDISNDGTKVVFIATPSLNDYMNGDLYILDVEAEELQKMNVDKLLGGSVCFS 249

Query: 311 PDSSQIVFE-SDRE---GKEQLY-----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           P+ S+I +  S RE    +  +      +   N  +  +   + +++     W+ +G  I
Sbjct: 250 PEGSKICYSASIREKEYYRNHIQESILEIYDMNTGEVIQPLTNFDSTVMPLQWTDKG--I 307

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                    + IG++ +DG+ E +L +  D  +   + +  G  + +++    +T  ++Y
Sbjct: 308 LIRWQDKTNYLIGLLCEDGTVE-MLSDKVDGFIMDASITRDGNHISYNKAITNET-FEIY 365

Query: 420 SID 422
             D
Sbjct: 366 LDD 368



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 81/278 (29%), Gaps = 56/278 (20%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRALIS 275
           S + + VA+           Y     I    K     + +       P +S + K     
Sbjct: 26  SDDGKNVAFVKKSANWEDNTYRNHVWIYEKDKGQSYPLTDGDIDSTHPLWSPDSKTIAYL 85

Query: 276 VQKDEAM---DIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFES----------- 320
               +      I+   +   +  ++T     I+    + P      + +           
Sbjct: 86  SPGGDGANTNQIFVKSIDGCSEVQMTGEEEGISTF-KWDPMGKGFYYVAQSKECEEIQKR 144

Query: 321 -DREGKEQ---------------LYVMQSNGSDQK------RISQDKEASYFDPVWSPQG 358
            +R G                  +  ++ N   ++      ++++ K+    +   S  G
Sbjct: 145 KERYGDFHHVGKEHRNNCLYYIEIEKVKQNDKQERKVSGLYQLTEGKDFYIHNFDISNDG 204

Query: 359 DLIAFTK----FSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS------ 407
             + F             + ++  +  + + + V+     +  +SP G  + +S      
Sbjct: 205 TKVVFIATPSLNDYMNGDLYILDVEAEELQKMNVDKLLGGSVCFSPEGSKICYSASIREK 264

Query: 408 ---RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
              R    ++  ++Y ++     + L N  +     QW
Sbjct: 265 EYYRNHIQESILEIYDMNTGEVIQPLTNFDSTVMPLQW 302



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 8/86 (9%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPS 400
           S      S  G  +AF K S        +  + + +KD  Q   L + D +   P WSP 
Sbjct: 19  SLSSANVSDDGKNVAFVKKSANWEDNTYRNHVWIYEKDKGQSYPLTDGDIDSTHPLWSPD 78

Query: 401 GRSLIFSR-KKDGDTGSKLYSIDLNG 425
            +++ +     DG   ++++   ++G
Sbjct: 79  SKTIAYLSPGGDGANTNQIFVKSIDG 104


>gi|119470641|ref|ZP_01613309.1| Dipeptidyl-peptidase IV [Alteromonadales bacterium TW-7]
 gi|119446111|gb|EAW27389.1| Dipeptidyl-peptidase IV [Alteromonadales bacterium TW-7]
          Length = 778

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 51/140 (36%), Gaps = 35/140 (25%)

Query: 265 FSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YSPD 312
           +S +GK  ++        +     D + ++L++N  ++L      ++  +      +SPD
Sbjct: 136 WSKDGKWLMVFTNSEQVWRSRSRGDFWLLNLETNQLQQL---GGKDVEPTKLMFAKFSPD 192

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----------------VWSP 356
           SS++ +  D      +Y+     +D   ++ D  A+  +                  WSP
Sbjct: 193 SSKVAYVRD----NNIYMQAVGSNDVTALTTDGSATIVNGNFDWVYEEEFTIADGFRWSP 248

Query: 357 QGDLIAFTKFSGEKFAIGVM 376
               IA+ +          M
Sbjct: 249 DNKSIAYWQLDTSDVKFFTM 268



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 61/401 (15%), Positives = 133/401 (33%), Gaps = 73/401 (18%)

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW--DVKDRKQIIGKKF 144
                  P +I  +Q W+  G  ++V     +  + R R +F L   +    +Q+ GK  
Sbjct: 121 LPAGADEPFAIESYQ-WSKDGKWLMVFTNSEQVWRSRSRGDFWLLNLETNQLQQLGGK-- 177

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGA- 201
              P          S D            +S++ +V ++ +    +  N +  +  DG+ 
Sbjct: 178 DVEPTKLMFA--KFSPD------------SSKVAYVRDNNIYMQAVGSNDVTALTTDGSA 223

Query: 202 -----NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----- 251
                N  ++      I    R+SP+ + +AY   D  D+    +++   +  P      
Sbjct: 224 TIVNGNFDWVYEEEFTIADGFRWSPDNKSIAYWQLDTSDVKFFTMINNTDELYPTLKEFP 283

Query: 252 --RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSN--------------- 292
             + G   S +     S   K+   +  + +  D Y   +                    
Sbjct: 284 YPKAGETNSAVRVGVVSLADKQTRWAELEGDNRDRYIPRISWAGTGNELMIQDLNRPQSH 343

Query: 293 --------ATERLT------NTLFINIS--ASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                     ++LT      +  FI     A++S D    ++ S+R+G   LY +  +G 
Sbjct: 344 NKVWLFDWQKQQLTKILEDKDDAFIEWFYKANWSKDGEFFIWHSERDGWRHLYRVSRDGK 403

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
               ++            +   +L+ F        +  +     DGS + + V  ++ + 
Sbjct: 404 TIIDLTPGDYDIIDMLSINEDKNLMYFIASPNDPGQRYLYSTPLDGSSKPVRVTPADFEG 463

Query: 394 --APTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLI 431
             +   S      + +  K G     ++  +  +   +TL+
Sbjct: 464 SNSYYMSKDASWAMHTYSKFGTPPTKEIIKVSDHSNVKTLV 504



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 46/135 (34%), Gaps = 29/135 (21%)

Query: 325 KEQLYVMQSNGSDQKRISQ---------DKEASYFDPVWSPQGDLI--------AFTKFS 367
              +    ++G+ +K + +         D+  +     WS  G  +         +   S
Sbjct: 98  GNDIVFYNADGTGRKVLVEFEKLLPAGADEPFAIESYQWSKDGKWLMVFTNSEQVWRSRS 157

Query: 368 GEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              F   ++  + +Q + L    VE + L    +SP    + + R       + +Y   +
Sbjct: 158 RGDF--WLLNLETNQLQQLGGKDVEPTKLMFAKFSPDSSKVAYVRD------NNIYMQAV 209

Query: 424 NGRNETLINTPAYAS 438
              + T + T   A+
Sbjct: 210 GSNDVTALTTDGSAT 224


>gi|300783708|ref|YP_003763999.1| hypothetical protein AMED_1786 [Amycolatopsis mediterranei U32]
 gi|299793222|gb|ADJ43597.1| WD-40 repeat-containing protein [Amycolatopsis mediterranei U32]
          Length = 1259

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 67/204 (32%), Gaps = 20/204 (9%)

Query: 207  TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI---LAP 263
                   +    FSP+ + +A A +D        L D    RAP+ +           + 
Sbjct: 1058 LEGHTDDVHAIAFSPDGRTLATAGWDH----TARLWDISSPRAPRPLAKLTGHTDTIFSI 1113

Query: 264  RFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFES- 320
             +S +GK    +   D  + ++ V         E L     + +S S+S D   +   S 
Sbjct: 1114 AYSPDGKHVA-TGSADRMVRLWDVTDPAHVPPPEVLDGHADLVMSVSFSGDGRTLASGSY 1172

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            DR     + +     +    +  ++    +   ++P G  +A     G          D 
Sbjct: 1173 DRT----IRLWDVATAKPYAVLPEQRDRVYAAQYAPDGHTLAGASGDGTV-RFWEADPDR 1227

Query: 381  SQERLLVEDSNLQAPT-WS---PS 400
            + ER+    S    P  WS   P 
Sbjct: 1228 AAERICAAVSPRITPAEWSESFPD 1251



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 50/317 (15%), Positives = 95/317 (29%), Gaps = 43/317 (13%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWDV D +Q         P   + +   I   +  ++    G           ++ +  
Sbjct: 869  RLWDVADPRQ---------PRELQSLPGHIG-AVVSAVFTPDG----------RTLATAS 908

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               S+ + D  G  I    P+         F P  + +    YD   +      D R  R
Sbjct: 909  DDQSVRLWDLPGPAI----PAHPAQACHLAFGPAGKLLVSGGYDQT-VRLHDRTDPRAPR 963

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                IG F   +     S +G+                 D  +     + N L  ++ A 
Sbjct: 964  TSATIGGFGDAVCGVAVSPDGRTLATGSWDHTMTLRDITDPAAPGPPVVFNRLHDDVDAV 1023

Query: 309  -YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKF 366
             +SPD   +    D     +L+ +       +    +          +SP G  +A   +
Sbjct: 1024 VFSPDGRLLATAGD-GHTARLWDLADRTRPVEIAKLEGHTDDVHAIAFSPDGRTLATAGW 1082

Query: 367  SGEK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  + I   +      +L      + +  +SP G+ +        D   +L+ +   
Sbjct: 1083 DHTARLWDISSPRAPRPLAKLTGHTDTIFSIAYSPDGKHVA---TGSADRMVRLWDV--- 1136

Query: 425  GRNETLINTPAYASDPQ 441
                     PA+   P+
Sbjct: 1137 -------TDPAHVPPPE 1146



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 73/229 (31%), Gaps = 23/229 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     +  V D    +   +      ++    FSP    +A A+ D    L   + D  
Sbjct: 774 SASADKTARVWDVASRSQLGVAAGHTDVVHSVAFSPGAPVLATASQDQTARLW-DIADPA 832

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFI 303
                  +   ++++ +  F+++G+    +   D    ++ V    Q    + L   +  
Sbjct: 833 HPAPLSSLTTHKAIVRSVAFTADGRTLATTGF-DRTARLWDVADPRQPRELQSLPGHIGA 891

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +SA ++PD   +   SD    + + +    G           A      + P G L+  
Sbjct: 892 VVSAVFTPDGRTLATASD---DQSVRLWDLPGPAI----PAHPAQACHLAFGPAGKLLV- 943

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSN-------LQAPTWSPSGRSLI 405
                  +   V   D +  R     +        +     SP GR+L 
Sbjct: 944 ----SGGYDQTVRLHDRTDPRAPRTSATIGGFGDAVCGVAVSPDGRTLA 988



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 43/151 (28%), Gaps = 18/151 (11%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDP 352
             RLT       + +  PD   I   +  +G  +L+ V   +      +    + +  + 
Sbjct: 615 ATRLTGHTGRVNTVTLRPDGRVIA-TASWDGTARLWDVHDPHHPVPLGVLAGHDGNVNNV 673

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            ++  G  +A   F G      V      G    +   +    A  +SP           
Sbjct: 674 AFASDGRTVATAGFDGTVRVWDVSDPARPGPGTTIERHEGKAYAVAFSP----------- 722

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              T   L + D+ G       T      P 
Sbjct: 723 ---TAPLLATADVKGTIRLYDTTDTAHPRPA 750



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 56/174 (32%), Gaps = 33/174 (18%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIA----HTISDDIYQSITGEKGDFNSRILFVSESV 184
            RLWD+            SSP + R +A    HT  D I+       G           + 
Sbjct: 1087 RLWDI------------SSPRAPRPLAKLTGHT--DTIFSIAYSPDGK--------HVAT 1124

Query: 185  VSGIIKNSLC-VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             S      L  V D        +      ++    FS + + +A  +YD      + L D
Sbjct: 1125 GSADRMVRLWDVTDPAHVPPPEVLDGHADLVMSVSFSGDGRTLASGSYDR----TIRLWD 1180

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                +    +   R  + A +++ +G         D  +  +  D    A ER+
Sbjct: 1181 VATAKPYAVLPEQRDRVYAAQYAPDGHTLA-GASGDGTVRFWEADPD-RAAERI 1232


>gi|238508267|ref|XP_002385331.1| F-box and wd40 domain protein, putative [Aspergillus flavus
           NRRL3357]
 gi|220688850|gb|EED45202.1| F-box and wd40 domain protein, putative [Aspergillus flavus
           NRRL3357]
          Length = 414

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 78/246 (31%), Gaps = 39/246 (15%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRF 265
               I   P  SP+ + VA    +     ++ + D     + + + + +   S+  AP  
Sbjct: 48  GLGGIASTPTLSPDDKLVAVGVNE-----KILVFDVATQASLEVLTDEKRVESVQFAPGV 102

Query: 266 --SSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISA---SYSPDSS 314
             S +GK A   +      D      I+ +D +       T    +       S+S D  
Sbjct: 103 VDSRDGKHARYLLASQGGSDENPQVIIWELDEKGKLVT--TTEPRLVFEGELGSFSSDGR 160

Query: 315 QIVFESDREGKEQ----------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +VF S  E  ++          + +        +               SP   L+A  
Sbjct: 161 TLVFFSQNETTQEESREAAALPCINLWNIETQSFRHHLLGHTDRIMWAAMSPDNKLVASV 220

Query: 365 KFSGEKFAIGVMKK-DGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            + G      V     GS   +L      L +  +SP    L FS    G+  + ++  D
Sbjct: 221 AWDG---IARVWDAWSGSCLHVLGPMGGQLWSGAFSPDQEFLAFS---QGNPRTYIHVYD 274

Query: 423 LNGRNE 428
           +    +
Sbjct: 275 IATGKQ 280



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 71/209 (33%), Gaps = 20/209 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + + +  + R+        +     SP+ + VA   +D   I RV+  D         
Sbjct: 184 INLWNIETQSFRHHLLGHTDRIMWAAMSPDNKLVASVAWD--GIARVW--DAWSGSCLHV 239

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSP 311
           +G     + +  FS + +    S Q +    I+  D+ +       + L +   S S+  
Sbjct: 240 LGPMGGQLWSGAFSPDQEFLAFS-QGNPRTYIHVYDIATGKQVSRFDKLHMATRSLSWRH 298

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKR---ISQD-----KEASYFDPVWSPQGDLIAF 363
           D + +   +D      L +      +++    ++ D     + A+     +   G  + F
Sbjct: 299 DGTMLACGAD---DGTLCIWDPYTGEERMRWCLTFDDFLMCRFANTRAVQFVDGGKKLVF 355

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
               G    + V   + + ++      + 
Sbjct: 356 QIREGT---VEVYDFERNLKQQFTRGVDD 381


>gi|301051902|ref|YP_003790113.1| prolyl oligopeptidase family [Bacillus anthracis CI]
 gi|300374071|gb|ADK02975.1| prolyl oligopeptidase family [Bacillus cereus biovar anthracis str.
           CI]
          Length = 654

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 9/100 (9%)

Query: 354 WSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  G  +AF K +        +  + + +KD G    L   D +   P WSP  +S+ +
Sbjct: 25  ISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIAY 84

Query: 407 -SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            S   DGD  ++++   L+  +E  + +     S+ +W  
Sbjct: 85  LSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDP 124



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 78/242 (32%), Gaps = 26/242 (10%)

Query: 206 LTPSRDQILFEPR-----FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNF 256
           +  S ++I+  P       S + + VA+           Y     I    K     +   
Sbjct: 7   IYLSIEEIISLPTVLSTNISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTG 66

Query: 257 RSMILAPRFSSNGKRALISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDS 313
               + P +S + K         +      I+   L   +  ++T+      +  + P  
Sbjct: 67  DIDSIHPLWSPDSKSIAYLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDPTG 126

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
               + +  +  E++   +    D + + ++ + +    +     ++    +   E+  I
Sbjct: 127 KGFYYITQSKECEEIKKRKELYGDFQHVGKEHQNNCLCYI-----EIEKVIQNDKEEREI 181

Query: 374 -GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNETL 430
            GV +  G       +D  +     S +G+ ++       +      LY +D+  R    
Sbjct: 182 NGVYQLIGG------KDFYIHGFDISDNGKKVVCMATPSLNDHMNGDLYILDVEARELQQ 235

Query: 431 IN 432
           +N
Sbjct: 236 MN 237



 Score = 43.5 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 100/307 (32%), Gaps = 60/307 (19%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDD 233
           + FV  +        +N + + ++D     Y   + D     P +SP+ + +AY ++  D
Sbjct: 32  VAFVKRTANWEDNTYRNHVWIYEKD-KGKSYPLTTGDIDSIHPLWSPDSKSIAYLSSGGD 90

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
            D+     + +  D +  +I + +  +   R+   GK      Q                
Sbjct: 91  GDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDPTGKGFYYITQSKECEEIKKRKELYGD 150

Query: 278 ------KDEAMDIYSVDLQS-----------NATERLTNTLFINISAS-YSPDSSQIVFE 319
                 + +   +  ++++            N   +L       I     S +  ++V  
Sbjct: 151 FQHVGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLIGGKDFYIHGFDISDNGKKVVCM 210

Query: 320 SDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           +     +     LY++     + ++++ DK        +SP+G+ I ++           
Sbjct: 211 ATPSLNDHMNGDLYILDVEARELQQMNVDKLLG-GSACFSPEGNKICYSASIREKEYYRN 269

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I  M   G   + L    +   P  W+  G  + +       T   +  +  
Sbjct: 270 HIQESTLEIYDMNT-GEVIQPLTNFDSTVMPLQWTAKGILIRW----QDKTNYFIGLLAE 324

Query: 424 NGRNETL 430
           +G  ETL
Sbjct: 325 DGTVETL 331


>gi|228912903|ref|ZP_04076549.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228846718|gb|EEM91724.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 654

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 9/100 (9%)

Query: 354 WSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  G  +AF K +        +  + + +KD G    L   D +   P WSP  +S+ +
Sbjct: 25  ISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIAY 84

Query: 407 -SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            S   DGD  ++++   L+  +E  + +     S+ +W  
Sbjct: 85  LSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDP 124



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 71/225 (31%), Gaps = 21/225 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     +       + P +S + K   
Sbjct: 24  NISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIA 83

Query: 274 ISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                 +      I+   L   +  ++T+      +  + P      + +  +  E++  
Sbjct: 84  YLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDPTGKGFYYITQSKECEEIKK 143

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLLVED 389
            +    D + + ++ + +    +     ++    +   E+  I GV +  G       +D
Sbjct: 144 RKELYGDFQHVGKEHQNNCLCYI-----EIEKVIQNDKEEREINGVYQLTGG------KD 192

Query: 390 SNLQAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNETLIN 432
             +     S +G+ ++       +      LY +D+  R    +N
Sbjct: 193 FYIHGFDISDNGKKVVCMATPSLNDHMNGDLYILDVEARELQQMN 237



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 101/307 (32%), Gaps = 60/307 (19%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDD 233
           + FV  +        +N + + ++D     Y   + D     P +SP+ + +AY ++  D
Sbjct: 32  VAFVKRTANWEDNTYRNHVWIYEKD-KGKSYPLTTGDIDSIHPLWSPDSKSIAYLSSGGD 90

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
            D+     + +  D +  +I + +  +   R+   GK      Q                
Sbjct: 91  GDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDPTGKGFYYITQSKECEEIKKRKELYGD 150

Query: 278 ------KDEAMDIYSVDLQS-----------NATERLTNTLFINISAS-YSPDSSQIVFE 319
                 + +   +  ++++            N   +LT      I     S +  ++V  
Sbjct: 151 FQHVGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTGGKDFYIHGFDISDNGKKVVCM 210

Query: 320 SDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           +     +     LY++     + ++++ DK        +SP+G+ I ++           
Sbjct: 211 ATPSLNDHMNGDLYILDVEARELQQMNVDKLLG-GSACFSPEGNKICYSASIREKDYYRN 269

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I  M   G   + L    +   P  W+  G  + +       T   +  +  
Sbjct: 270 HIQESTLEIYDMNT-GEVIQPLTNFDSTVMPLQWTAKGILIRW----QDKTNYFIGLLAE 324

Query: 424 NGRNETL 430
           +G  ETL
Sbjct: 325 DGTVETL 331


>gi|228943970|ref|ZP_04106354.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228815641|gb|EEM61878.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 654

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 9/100 (9%)

Query: 354 WSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  G  +AF K +        +  + + +KD G    L   D +   P WSP  +S+ +
Sbjct: 25  ISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIAY 84

Query: 407 -SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            S   DGD  ++++   L+  +E  + +     S+ +W  
Sbjct: 85  LSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDP 124



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 71/225 (31%), Gaps = 21/225 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     +       + P +S + K   
Sbjct: 24  NISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIA 83

Query: 274 ISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                 +      I+   L   +  ++T+      +  + P      + +  +  E++  
Sbjct: 84  YLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDPTGKGFYYITQSKECEEIKK 143

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLLVED 389
            +    D + + ++ + +    +     ++    +   E+  I GV +  G       +D
Sbjct: 144 RKELYGDFQHVGKEHQNNCLCYI-----EIEKVIQNDKEEREINGVYQLTGG------KD 192

Query: 390 SNLQAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNETLIN 432
             +     S +G+ ++       +      LY +D+  R    +N
Sbjct: 193 FYIHGFDISDNGKKVVCMATPSLNDHMNGDLYILDVEARELQQMN 237



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 101/307 (32%), Gaps = 60/307 (19%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDD 233
           + FV  +        +N + + ++D     Y   + D     P +SP+ + +AY ++  D
Sbjct: 32  VAFVKRTANWEDNTYRNHVWIYEKD-KGKSYPLTTGDIDSIHPLWSPDSKSIAYLSSGGD 90

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
            D+     + +  D +  +I + +  +   R+   GK      Q                
Sbjct: 91  GDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDPTGKGFYYITQSKECEEIKKRKELYGD 150

Query: 278 ------KDEAMDIYSVDLQS-----------NATERLTNTLFINISAS-YSPDSSQIVFE 319
                 + +   +  ++++            N   +LT      I     S +  ++V  
Sbjct: 151 FQHVGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTGGKDFYIHGFDISDNGKKVVCM 210

Query: 320 SDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           +     +     LY++     + ++++ DK        +SP+G+ I ++           
Sbjct: 211 ATPSLNDHMNGDLYILDVEARELQQMNVDKLLG-GSACFSPEGNKICYSASIREKDYYRN 269

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I  M   G   + L    +   P  W+  G  + +       T   +  +  
Sbjct: 270 HIQESTLEIYDMNT-GEVIQPLTNFDSTVMPLQWTAKGILIRW----QDKTNYFIGLLAE 324

Query: 424 NGRNETL 430
           +G  ETL
Sbjct: 325 DGTVETL 331


>gi|196041105|ref|ZP_03108401.1| putative prolyl oligopeptidase family protein [Bacillus cereus
           NVH0597-99]
 gi|196028040|gb|EDX66651.1| putative prolyl oligopeptidase family protein [Bacillus cereus
           NVH0597-99]
          Length = 654

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 9/100 (9%)

Query: 354 WSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  G  +AF K +        +  + + +KD G    L   D +   P WSP  +S+ +
Sbjct: 25  ISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIAY 84

Query: 407 -SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            S   DGD  ++++   L+  +E  + +     S+ +W  
Sbjct: 85  LSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDP 124



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 72/225 (32%), Gaps = 21/225 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     +       + P +S + K   
Sbjct: 24  NISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIA 83

Query: 274 ISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                 +      I+   L   +  ++T+      +  + P      + +  +  E++  
Sbjct: 84  YLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDPTGKGFYYITQSKECEEIKK 143

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLLVED 389
            +    D + + ++ + +    +     ++    +   E+  I GV +  G       +D
Sbjct: 144 RKELYGDFQHVGKEHQNNCLCYI-----EIEKVIQNDKEEREINGVYQLTGG------KD 192

Query: 390 SNLQAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNETLIN 432
             +     S +G+ ++       +     +LY +D+  R    +N
Sbjct: 193 FYIHGFDISDNGKKVVCMATPSLNDHMNGELYILDVEARELQQMN 237



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 101/307 (32%), Gaps = 60/307 (19%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDD 233
           + FV  +        +N + + ++D     Y   + D     P +SP+ + +AY ++  D
Sbjct: 32  VAFVKRTANWEDNTYRNHVWIYEKD-KGKSYPLTTGDIDSIHPLWSPDSKSIAYLSSGGD 90

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
            D+     + +  D +  +I + +  +   R+   GK      Q                
Sbjct: 91  GDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDPTGKGFYYITQSKECEEIKKRKELYGD 150

Query: 278 ------KDEAMDIYSVDLQS-----------NATERLTNTLFINISAS-YSPDSSQIVFE 319
                 + +   +  ++++            N   +LT      I     S +  ++V  
Sbjct: 151 FQHVGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTGGKDFYIHGFDISDNGKKVVCM 210

Query: 320 SDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           +     +     LY++     + ++++ DK        +SP+G+ I ++           
Sbjct: 211 ATPSLNDHMNGELYILDVEARELQQMNVDKLLG-GSACFSPEGNKICYSASVREKDYYRN 269

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I  M   G   + L    +   P  W+  G  + +       T   +  +  
Sbjct: 270 HIQESTLEIYDMNT-GEVIQPLTNFDSTVMPLQWTAKGILIRW----QDKTNYFIGLLAE 324

Query: 424 NGRNETL 430
           +G  ETL
Sbjct: 325 DGTVETL 331


>gi|300725928|ref|ZP_07059390.1| dipeptidyl peptidase IV [Prevotella bryantii B14]
 gi|299776779|gb|EFI73327.1| dipeptidyl peptidase IV [Prevotella bryantii B14]
          Length = 697

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 52/364 (14%), Positives = 117/364 (32%), Gaps = 78/364 (21%)

Query: 155 AHTISDDIYQ-------SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
            H++ D  +         I     D+  +   V  +  + I    L V D++G   +  T
Sbjct: 82  IHSLYDATFPNAKKSIVKIGNLLIDWKKKSCTVDATPKAYIKNYQLYVKDKNGKEHQLST 141

Query: 208 PSRDQILFEPR-------------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
                I++                +SPN++K+A+   D   +    L++           
Sbjct: 142 DGSRNIVYGQSVHRDEFGISDGRFWSPNKEKLAFYRMDQSMVTDYPLVNIPEIEWNPEKN 201

Query: 255 NFRSMILAP-----------------------------------------RFSSNGKRA- 272
             R    AP                                          +  + +   
Sbjct: 202 QSRIATPAPEKYPMAGETSHEVTVGIYNLKTNKTIYLKAGNPQNRYFTNIAWGPDNQTVY 261

Query: 273 LISVQKDEAM-DIYSVDLQSN----ATERLTNTLFINISA--SYSP-DSSQIVFESDREG 324
           +  + +D+    + S + ++        R T+T ++       + P D S+ + +S ++G
Sbjct: 262 IFELNRDQNDCRLVSYNSETGEKIAELYRETDTKYVEPQHPIVFLPWDHSKFILQSQKDG 321

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQ 382
               Y+  + G   K+I+           ++ +   I +     S  +  I  +  +  +
Sbjct: 322 YNHFYLFNTQGKLLKQITSGNWVVMDFIGFNAKQHSIIYASNELSPIQRNIFSVNLESGK 381

Query: 383 ERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             L+ ++       + SP+G+ +     +      K+  I+++    T   T   A DP 
Sbjct: 382 RTLIDDNGKGWHHASLSPNGQFIT-DNYQTPTIPRKIAIINIDNSKRTPYYT---AEDP- 436

Query: 442 WVGF 445
           W G+
Sbjct: 437 WKGY 440


>gi|302346547|ref|YP_003814845.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
 gi|302150388|gb|ADK96649.1| OmpA family protein [Prevotella melaninogenica ATCC 25845]
          Length = 653

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 55/159 (34%), Gaps = 22/159 (13%)

Query: 299 NTLFINISASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQK-------RISQDKEAS 348
           NT     + ++S D  ++      +D        +  SN SD          IS+D  +S
Sbjct: 191 NTEADEGTPAFSVDGREMYITQCLTDPSNPRYAQISVSNRSDAAWGKANKLEISRDTLSS 250

Query: 349 YFDPVWSPQGDLIAFTKF---SGEKFAIGVMKKDGSQE-------RLLVEDSNLQAPTWS 398
           +  P  SP G+ + FT           I  ++  G            +    + + PT+ 
Sbjct: 251 FAHPAVSPDGNWLYFTSDMPGGKGGLDIWRVRLTGGTTGGVENLGEPINTQGDEEFPTFR 310

Query: 399 PSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETLINTPAY 436
           P+G  L FS     G  G  ++   +       +  P Y
Sbjct: 311 PNGD-LYFSSNGHGGLGGLDIFIAKVGNDRRYHLEHPGY 348



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 45/148 (30%), Gaps = 20/148 (13%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------RI 253
           AN   ++         P  SP+   + + +        + +   R+              
Sbjct: 238 ANKLEISRDTLSSFAHPAVSPDGNWLYFTSDMPGGKGGLDIWRVRLTGGTTGGVENLGEP 297

Query: 254 GNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERL------TNTLFIN 304
            N +     P F  NG     S         +DI+   + ++    L       N+   +
Sbjct: 298 INTQGDEEFPTFRPNGD-LYFSSNGHGGLGGLDIFIAKVGNDRRYHLEHPGYPLNSQGDD 356

Query: 305 ISASYSPDSSQIVFESDRE---GKEQLY 329
              ++    ++  F S+R    G + +Y
Sbjct: 357 FGMTFEGIHNRGFFSSNRGDGRGWDHIY 384


>gi|293357792|ref|XP_575125.3| PREDICTED: WD repeat domain 38 [Rattus norvegicus]
          Length = 334

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 69/186 (37%), Gaps = 11/186 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +  A+ D      VY+  T+  R   R+   +  + + RFS +G R + S  
Sbjct: 63  AFSPDGRNLITASDDG----CVYVWGTKSGRLLWRLAGHKGPVKSCRFSPDG-RLVASSS 117

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++ V  ++     L        + S+SPDS Q+         +++ + +     
Sbjct: 118 CDHTIRLWDV-AKAKCLHVLKGHQRSVETVSFSPDSKQLA---SGGWDKRVILWEVQSGR 173

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAP 395
             R       S     +SP  D +A   +      + +       S   L     N+   
Sbjct: 174 NVRFLPGHCDSIQSSDFSPTSDSLATGSWDSTVHIWDLRASSPAVSFRNLEGHTGNISCL 233

Query: 396 TWSPSG 401
            +S SG
Sbjct: 234 KYSASG 239



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 13/192 (6%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           +   + +           +  G     +    FS +G+   I+   D  + ++       
Sbjct: 32  ERAPMNIRAPTKLAVGRVRFYGQHHGEVNCSAFSPDGRNL-ITASDDGCVYVWGT-KSGR 89

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RL        S  +SPD   +   S       + +     +    + +  + S    
Sbjct: 90  LLWRLAGHKGPVKSCRFSPDGRLVASSSC---DHTIRLWDVAKAKCLHVLKGHQRSVETV 146

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
            +SP    +A   +        V    G   R L    + +Q+  +SP+  SL       
Sbjct: 147 SFSPDSKQLASGGWDKRVILWEVQS--GRNVRFLPGHCDSIQSSDFSPTSDSLA-----T 199

Query: 412 GDTGSKLYSIDL 423
           G   S ++  DL
Sbjct: 200 GSWDSTVHIWDL 211



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 46/304 (15%), Positives = 93/304 (30%), Gaps = 30/304 (9%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK----FFSSPASWRKIAHTISDDIYQSI 166
           L  GRV   G+    V    +    R  I        +     S R +           +
Sbjct: 44  LAVGRVRFYGQHHGEVNCSAFSPDGRNLITASDDGCVYVWGTKSGRLLW---------RL 94

Query: 167 TGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
            G KG   S         V S    +++ + D   A   ++     + +    FSP+ ++
Sbjct: 95  AGHKGPVKSCRFSPDGRLVASSSCDHTIRLWDVAKAKCLHVLKGHQRSVETVSFSPDSKQ 154

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A   +D     RV L + +  R  + +      I +  FS        +   D  + I+
Sbjct: 155 LASGGWDK----RVILWEVQSGRNVRFLPGHCDSIQSSDFSPTSDSLA-TGSWDSTVHIW 209

Query: 286 SVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            +   S A     L           YS         +     + + + +   ++     +
Sbjct: 210 DLRASSPAVSFRNLEGHTGNISCLKYSASG----LLASGSWDKTVRIWKPTTNNLLLQLR 265

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSG 401
                     +SP    +A    +G    + V      +    ++       A  ++P+G
Sbjct: 266 GHATWVNSLAFSPDELKLA---SAGYSRMVKVWDCLTGKCLETLKGMLDVAHACIFTPNG 322

Query: 402 RSLI 405
           + L+
Sbjct: 323 KLLV 326


>gi|168702545|ref|ZP_02734822.1| hypothetical protein GobsU_23657 [Gemmata obscuriglobus UQM 2246]
          Length = 1502

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 60/189 (31%), Gaps = 18/189 (9%)

Query: 264 RFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             S++G   + S        D + +D ++           +    S S D + +V  S  
Sbjct: 695 AVSADGSVLVFSGSLHGHTGDAHILDGRTGRVRASIAQPHVTTHPSLSADGALLVVTSSS 754

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--- 379
           +GK  + V++++ +      + +  + + P   P G           +      + D   
Sbjct: 755 QGKTTVSVLRTDTAAVVAELEARPGATYCPAILPDGRGFVVRVHVPGERRSYAQRYDFAP 814

Query: 380 ---------GSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                      +ERL V+ +   Q   +S  G++L        D       ID       
Sbjct: 815 AGALPPEATAGRERLKVDLNFQPQFARFSGDGQAL----TAHADKSKWFALIDARAGKVR 870

Query: 430 LINTPAYAS 438
           +I T     
Sbjct: 871 IIPTTGDLR 879



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 78/246 (31%), Gaps = 19/246 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +R+L V  +         L     DG     +   + Q       S +   + ++     
Sbjct: 654 TRVLLVERTGAC--RWFKLPSGRPDGQFDLPIATDKWQGGGLSAVSADGSVLVFSGSLHG 711

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                +++D R  R    I     +   P  S++G   +++        +  +   + A 
Sbjct: 712 HTGDAHILDGRTGRVRASIAQPH-VTTHPSLSADGALLVVTSSSQGKTTVSVLRTDTAAV 770

Query: 295 E-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-----------GSDQKRIS 342
              L          +  PD    V      G+ + Y  + +            + ++R+ 
Sbjct: 771 VAELEARPGATYCPAILPDGRGFVVRVHVPGERRSYAQRYDFAPAGALPPEATAGRERLK 830

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP--S 400
            D         +S  G   A T  + +     ++     + R++    +L+A ++ P   
Sbjct: 831 VDLNFQPQFARFSGDGQ--ALTAHADKSKWFALIDARAGKVRIIPTTGDLRAYSFVPLAR 888

Query: 401 GRSLIF 406
           GR  +F
Sbjct: 889 GRVGVF 894



 Score = 46.2 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 77/275 (28%), Gaps = 42/275 (15%)

Query: 199  DGANIRYLTPSRDQILFEPRFSPNQQKVAY-----------ATYDDEDILRVYLMDTRID 247
            D  N+              R SP  + VA                DE    V + DTR  
Sbjct: 913  DTINLPQFPAGYASSFRTIRPSPGGRFVAVGCLGGVRFNPETKRTDEIPGPVQVFDTRTG 972

Query: 248  RAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +       +   M     FS +  R L+  ++          L S       ++ ++   
Sbjct: 973  KTVVSTEWYGDVMHTGFAFSPDSSRVLVIDRRLRGRW---YKLPSGEP----DSEWVYGG 1025

Query: 307  ------------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                        A  S D   ++      G+   + + +       +    E +Y     
Sbjct: 1026 GAGAPAGAAVSVARLSQDGRAVLCNGFAAGRPGAFTLDAATGA---LGTVFEGAYGIGEL 1082

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTW--SPSGRSLIFSRKK 410
            S  G           +    V+      E  R+ +      AP    +P GR+L+     
Sbjct: 1083 SADGTRARLAANKPGRHTSVVVNTSTGSEVGRVEIATGPDSAPNVELAPDGRALL---HF 1139

Query: 411  DGDTGSKLYSIDLNG-RNETLINTPAYASDPQWVG 444
            DG     L   DL G  ++           P+W G
Sbjct: 1140 DGSKRGPLVVYDLAGAADDPPAPAVGAGPKPRWTG 1174



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 75/252 (29%), Gaps = 16/252 (6%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  + + T         P  + N + VA+      D     L         KR+   ++ 
Sbjct: 495 GLRLVWTTAEDLGGGLYPVCTLNSRLVAFPGVMGGDSRGAVLDA----ATGKRVAQSQAR 550

Query: 260 ILAPRFSS----NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDS 313
             A  F      N +R  ++ Q   A  I  VD ++  T  L              SP +
Sbjct: 551 PAAGSFDRLQPLNDERFAVTAQHSLAP-IPVVDARTGQTTELPYIPGPRRVTFEQVSPGA 609

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKF 371
             +           +   +   +  +R+  D         ++  G  +   + +G    F
Sbjct: 610 QYVALCVPPL-APDVGSFKLMRTSDERVLLDLPCPAVRAHFAADGTRVLLVERTGACRWF 668

Query: 372 AIGVMKKDGS-QERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            +   + DG     +  +       +  S  G  L+FS    G TG         GR   
Sbjct: 669 KLPSGRPDGQFDLPIATDKWQGGGLSAVSADGSVLVFSGSLHGHTGDAHILDGRTGRVRA 728

Query: 430 LINTPAYASDPQ 441
            I  P   + P 
Sbjct: 729 SIAQPHVTTHPS 740


>gi|153837627|ref|ZP_01990294.1| oligogalacturonate lyase [Vibrio parahaemolyticus AQ3810]
 gi|149749019|gb|EDM59838.1| oligogalacturonate lyase [Vibrio parahaemolyticus AQ3810]
          Length = 388

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 67/191 (35%), Gaps = 28/191 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG+N+R +    +        + P+   +AY +
Sbjct: 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-------------LISV 276
           Y      R +Y  +       + +       L   F  +G                  S 
Sbjct: 257 YFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNF--DGSLMVGDGCDAPVDVADADSY 314

Query: 277 QKDEAMDIYSVDLQSNATERL----TNTLFINIS-------ASYSPDSSQIVFESDREGK 325
             +    +Y ++ ++ + ++L    T+   ++          S++P+   ++F SD EG 
Sbjct: 315 NIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGV 374

Query: 326 EQLYVMQSNGS 336
             +Y+     S
Sbjct: 375 PAIYIADVPES 385



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 90/261 (34%), Gaps = 39/261 (14%)

Query: 196 MDRDGANIRYLTPSRDQIL-----FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           +D D           D I      ++  F+ + +K+ +A  D +     YL+D    +A 
Sbjct: 15  VDSDTQVKVTRLTPTDVICHRNYFYQKCFTQDGKKLLFAG-DFDGNRNYYLLDLETQQAV 73

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASY 309
           +              S++ +RA   V+ +  +++  VDL++   + + T         ++
Sbjct: 74  QLTEGKGDNTFGGFISTD-ERAFFYVKNE--LNLMKVDLETLEEQVIYTVDEEWKGYGTW 130

Query: 310 --SPDSSQIV-----------------FESDREGKE--QLYVMQSNGSDQKRISQDKEAS 348
             + D +++V                 F          +L  +     + + I QD  A 
Sbjct: 131 VANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDT-AW 189

Query: 349 YFDPVWSP-QGDLIAFTKFSGEKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSG 401
              P++ P     + F            + ++ +DGS  R +    E  +     W P G
Sbjct: 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDG 249

Query: 402 RSLIFSRKKDGDTGSKLYSID 422
            ++ +     G T   +Y  +
Sbjct: 250 SAMAYVSYFKGQTDRVIYKAN 270



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 66/192 (34%), Gaps = 28/192 (14%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDRE 323
           F+ +GK+ L +   D   + Y +DL++    +LT     N    + S D     +  +  
Sbjct: 43  FTQDGKKLLFAGDFDGNRNYYLLDLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNEL 102

Query: 324 GKEQLYVMQSNGSDQKRIS-----QDKEASYFDPV--------------WSPQGDLIAFT 364
               L  +     +++ I           ++                  W P      F 
Sbjct: 103 ---NLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFA 159

Query: 365 KFSGEKFAIGVMKKD--GSQERLLVEDSNL-QAPTWSP-SGRSLIFSRKKDGDT-GSKLY 419
           +F        ++K D    +  ++ +D+     P + P    ++ F  +   D   ++++
Sbjct: 160 EFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMW 219

Query: 420 SIDLNGRNETLI 431
            ++ +G N   I
Sbjct: 220 LVNEDGSNVRKI 231



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/238 (10%), Positives = 68/238 (28%), Gaps = 37/238 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           + P      +A +   +     +         + I    + +  P +   +        +
Sbjct: 149 WQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ V+   +   ++             + PD S + + S  +G+    +Y 
Sbjct: 209 GPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK 268

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMK 377
                 + + +      S+    +   G L+              + + I       V+ 
Sbjct: 269 ANPETLENEEVMVMPPCSHLMSNF--DGSLMVGDGCDAPVDVADADSYNIENDPFLYVLN 326

Query: 378 KDGSQERLLVEDSNLQ------------APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 + L + S                P+++P+   ++F+   +G     +Y  D+
Sbjct: 327 TKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG--VPAIYIADV 382


>gi|28899943|ref|NP_799598.1| oligogalacturonate lyase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363237|ref|ZP_05776106.1| oligogalacturonate lyase [Vibrio parahaemolyticus K5030]
 gi|260880524|ref|ZP_05892879.1| oligogalacturonate lyase [Vibrio parahaemolyticus AN-5034]
 gi|260898523|ref|ZP_05907019.1| oligogalacturonate lyase [Vibrio parahaemolyticus Peru-466]
 gi|260902250|ref|ZP_05910645.1| oligogalacturonate lyase [Vibrio parahaemolyticus AQ4037]
 gi|28808226|dbj|BAC61431.1| oligogalacturonate lyase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308084985|gb|EFO34680.1| oligogalacturonate lyase [Vibrio parahaemolyticus Peru-466]
 gi|308092410|gb|EFO42105.1| oligogalacturonate lyase [Vibrio parahaemolyticus AN-5034]
 gi|308110534|gb|EFO48074.1| oligogalacturonate lyase [Vibrio parahaemolyticus AQ4037]
 gi|308112221|gb|EFO49761.1| oligogalacturonate lyase [Vibrio parahaemolyticus K5030]
          Length = 388

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 67/191 (35%), Gaps = 28/191 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG+N+R +    +        + P+   +AY +
Sbjct: 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-------------LISV 276
           Y      R +Y  +       + +       L   F  +G                  S 
Sbjct: 257 YFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNF--DGSLMVGDGCDAPVDVADADSY 314

Query: 277 QKDEAMDIYSVDLQSNATERL----TNTLFINIS-------ASYSPDSSQIVFESDREGK 325
             +    +Y ++ ++ + ++L    T+   ++          S++P+   ++F SD EG 
Sbjct: 315 NIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGV 374

Query: 326 EQLYVMQSNGS 336
             +Y+     S
Sbjct: 375 PAIYIADVPES 385



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 90/261 (34%), Gaps = 39/261 (14%)

Query: 196 MDRDGANIRYLTPSRDQIL-----FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           +D D           D I      ++  F+ + +K+ +A  D +     YL++    +A 
Sbjct: 15  VDSDTQVKVTRLTPTDVICHRNYFYQKCFTQDGKKLLFAG-DFDGNRNYYLLNLETQQAV 73

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASY 309
           +              S++ +RA   V+ +  +++  VDL++   + + T         ++
Sbjct: 74  QLTEGKGDNTFGGFISTD-ERAFFYVKNE--LNLMKVDLETLEEQVIYTVDEEWKGYGTW 130

Query: 310 --SPDSSQIV-----------------FESDREGKE--QLYVMQSNGSDQKRISQDKEAS 348
             + D +++V                 F          +L  +     + + I QD  A 
Sbjct: 131 VANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDT-AW 189

Query: 349 YFDPVWSP-QGDLIAFTKFSGEKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSG 401
              P++ P     + F            + ++ +DGS  R +    E  +     W P G
Sbjct: 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDG 249

Query: 402 RSLIFSRKKDGDTGSKLYSID 422
            ++ +     G T   +Y  +
Sbjct: 250 SAMAYVSYFKGQTDRVIYKAN 270



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 66/192 (34%), Gaps = 28/192 (14%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDRE 323
           F+ +GK+ L +   D   + Y ++L++    +LT     N    + S D     +  +  
Sbjct: 43  FTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNEL 102

Query: 324 GKEQLYVMQSNGSDQKRIS-----QDKEASYFDPV--------------WSPQGDLIAFT 364
               L  +     +++ I           ++                  W P      F 
Sbjct: 103 ---NLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFA 159

Query: 365 KFSGEKFAIGVMKKD--GSQERLLVEDSNL-QAPTWSP-SGRSLIFSRKKDGDT-GSKLY 419
           +F        ++K D    +  ++ +D+     P + P    ++ F  +   D   ++++
Sbjct: 160 EFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMW 219

Query: 420 SIDLNGRNETLI 431
            ++ +G N   I
Sbjct: 220 LVNEDGSNVRKI 231



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/238 (10%), Positives = 68/238 (28%), Gaps = 37/238 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           + P      +A +   +     +         + I    + +  P +   +        +
Sbjct: 149 WQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ V+   +   ++             + PD S + + S  +G+    +Y 
Sbjct: 209 GPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYK 268

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMK 377
                 + + +      S+    +   G L+              + + I       V+ 
Sbjct: 269 ANPETLENEEVMVMPPCSHLMSNF--DGSLMVGDGCDAPVDVADADSYNIENDPFLYVLN 326

Query: 378 KDGSQERLLVEDSNLQ------------APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 + L + S                P+++P+   ++F+   +G     +Y  D+
Sbjct: 327 TKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG--VPAIYIADV 382


>gi|110637962|ref|YP_678169.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110280643|gb|ABG58829.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 519

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 62/202 (30%), Gaps = 38/202 (18%)

Query: 255 NFRSMILAPRFSSNGKRALI----------SVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           N      +   + +G+  LI          S + D      + +L+        N+ F  
Sbjct: 223 NTNGHDASVSLTPDGQELLIYRYVNEGAFLSSKLDGTTWTIAEELKGEV-----NSKFYE 277

Query: 305 ISASYSPDSSQIVFESDREGKEQ-----LYVMQSNGSDQKRI----SQDKEASYFDPVWS 355
            SA  + D S I+F S++ G        +     NG   + I    + + +     P   
Sbjct: 278 PSACLTKDGSYIIFSSNQPGGYGGLDLYISKKLLNGEWARPINLGSTINSKYDEDSPFLH 337

Query: 356 PQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLVEDSNLQAP----------TWSPSGR 402
           P G  + F+         F +                 N+  P          + S  G+
Sbjct: 338 PDGKTLYFSSNGHNSMGGFDMFYSTALTDSTNQWNTPINVGYPLNSTHDDLHFSLSADGK 397

Query: 403 SLIFSRKK-DGDTGSKLYSIDL 423
            + F+  + +G     +Y   L
Sbjct: 398 RIYFASIRPEGYGDKDIYVATL 419



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 55/191 (28%), Gaps = 27/191 (14%)

Query: 221 PNQQKV-AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALISVQ 277
           P+ Q++  Y   ++   L   L  T    A +  G   S    P    + +G   + S  
Sbjct: 235 PDGQELLIYRYVNEGAFLSSKLDGTTWTIAEELKGEVNSKFYEPSACLTKDGSYIIFSSN 294

Query: 278 KDEAM---DIYSVD--LQSNATERL-----TNTLFINISASYSPDSSQIVFESD----RE 323
           +       D+Y     L       +      N+ +   S    PD   + F S+      
Sbjct: 295 QPGGYGGLDLYISKKLLNGEWARPINLGSTINSKYDEDSPFLHPDGKTLYFSSNGHNSMG 354

Query: 324 GKEQLYVMQSNGSDQKRISQ-------DKEASYFDPVWSPQGDLIAFTKFSGEKF---AI 373
           G +  Y      S  +  +        +          S  G  I F     E +    I
Sbjct: 355 GFDMFYSTALTDSTNQWNTPINVGYPLNSTHDDLHFSLSADGKRIYFASIRPEGYGDKDI 414

Query: 374 GVMKKDGSQER 384
            V   + +  +
Sbjct: 415 YVATLEETNVQ 425



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 66/196 (33%), Gaps = 39/196 (19%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---EG 324
           NGK+ +             +D+++   E   N+ +       + D  +I+F S R    G
Sbjct: 139 NGKKIV--------QTPIVIDIENLGPE--INSSYAEYGPVLTLDEKEIIFTSCRPETTG 188

Query: 325 KE----------QLYVMQSNGSDQKRISQ-----DKEASYFDPVWSPQGDLIAFTKFSGE 369
                        +Y+    GS  ++        +          +P G  +   ++  E
Sbjct: 189 GMIDPEDGLFFEDVYISSKKGSVWQKALNMGPAINTNGHDASVSLTPDGQELLIYRYVNE 248

Query: 370 KFAIGVMKKDGSQERLLVE-----DSNLQAPT--WSPSGRSLIFSRKK-DGDTGSKLYSI 421
              +   K DG+   +  E     +S    P+   +  G  +IFS  +  G  G  LY  
Sbjct: 249 GAFLS-SKLDGTTWTIAEELKGEVNSKFYEPSACLTKDGSYIIFSSNQPGGYGGLDLYIS 307

Query: 422 D--LNGRNETLINTPA 435
              LNG     IN  +
Sbjct: 308 KKLLNGEWARPINLGS 323


>gi|332185950|ref|ZP_08387697.1| dipeptidyl peptidase IV (DPP IV) [Sphingomonas sp. S17]
 gi|332014308|gb|EGI56366.1| dipeptidyl peptidase IV (DPP IV) [Sphingomonas sp. S17]
          Length = 752

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 63/206 (30%), Gaps = 37/206 (17%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---FRSMILAP--- 263
           R + +   R+SP+ +       + +    +        R    +            P   
Sbjct: 45  RTESVRASRWSPDGESYLAIEDNAKGGQDIVRYRIADGRREVVVAASDLVPKGAKTPLGI 104

Query: 264 ---RFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINI--SASYSPD 312
               +S + +  LI          +   D +  D  + A  ++      +    AS+SPD
Sbjct: 105 DGYEWSPDHRWLLIRTNGQRFRRTNALADYWLFDGTAKALRQIGGGAAPSALLYASFSPD 164

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSP 356
           SS++ +         LYV    G     +++D +    + +                WSP
Sbjct: 165 SSRVAYVR----ANNLYVEPVAGGAPIALTRDGDDYVVNGLADWVYEEEFSLHRAFEWSP 220

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               IAF +F         M K+   
Sbjct: 221 DSKRIAFFRFDTRGVGTFDMIKNTGG 246



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 62/421 (14%), Positives = 118/421 (28%), Gaps = 71/421 (16%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
           I   +  Q          F    ++  + +   R   +G+  L +E    D     Q I 
Sbjct: 21  IPAAARTQAPAPLSVEGIFGP-QAVRTESVRASRWSPDGESYLAIE----DNAKGGQDIV 75

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGD------FNSRILFVSESVVSGIIKNSL-- 193
           +  +      R++    SD + +      G        + R L +  +       N+L  
Sbjct: 76  R--YRIADGRREVVVAASDLVPKGAKTPLGIDGYEWSPDHRWLLIRTNGQRFRRTNALAD 133

Query: 194 -CVMDRDGANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDD------EDILRVYLMDTR 245
             + D     +R +        L    FSP+  +VAY   ++           + L    
Sbjct: 134 YWLFDGTAKALRQIGGGAAPSALLYASFSPDSSRVAYVRANNLYVEPVAGGAPIALTRDG 193

Query: 246 IDRAPKRIGNF-----RSMILAPRFSSNGKRALIS------------VQKDEAMDIYSVD 288
            D     + ++      S+  A  +S + KR                ++         + 
Sbjct: 194 DDYVVNGLADWVYEEEFSLHRAFEWSPDSKRIAFFRFDTRGVGTFDMIKNTGGQYSQVIP 253

Query: 289 LQS---------------------NATERLTNTLFINISASYS-PDSSQIVF--ESDR-E 323
           LQ                          +LT     N     S    S  VF  +S+R +
Sbjct: 254 LQYPKAGTTNSAVTVGTVDVVDSRTRWFKLTGDPRQNYVPQMSWAGGSDAVFIQQSNRLQ 313

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               + +        + +  +K+A++      P W   G    +         +  + + 
Sbjct: 314 NTYNVLLGDPATGAVRPVMVEKDAAWVEANDAPQWLDGGRRFTWLSERDGWRHLYTIDRA 373

Query: 380 GSQERLLVEDSNLQAPTWSPSGR--SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             +  L            +   +     F    D  T   LY   L+GR +    TPA  
Sbjct: 374 SGRATLRTPGKFDVVELLNVDEKAGYAWFIASPDNPTQRYLYRTTLSGRPQVERLTPAGQ 433

Query: 438 S 438
            
Sbjct: 434 P 434



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 53/163 (32%), Gaps = 11/163 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDR----APKRIGNFR 257
           +      +  + P+ S      A     +   ++   V L D           ++   + 
Sbjct: 281 FKLTGDPRQNYVPQMSWAGGSDAVFIQQSNRLQNTYNVLLGDPATGAVRPVMVEKDAAWV 340

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQI 316
               AP++   G+R     ++D    +Y++D  S      T   F  +   +    +   
Sbjct: 341 EANDAPQWLDGGRRFTWLSERDGWRHLYTIDRASGRATLRTPGKFDVVELLNVDEKAGYA 400

Query: 317 VFESDREGKEQ--LYVMQSNGSDQ-KRISQDKEASYFDPVWSP 356
            F +  +   Q  LY    +G  Q +R++   +        +P
Sbjct: 401 WFIASPDNPTQRYLYRTTLSGRPQVERLTPAGQPGTHSYDIAP 443


>gi|167382876|ref|XP_001736308.1| dipeptidyl-peptidase 5 precursor [Entamoeba dispar SAW760]
 gi|165901478|gb|EDR27561.1| dipeptidyl-peptidase 5 precursor, putative [Entamoeba dispar
           SAW760]
          Length = 680

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 76/230 (33%), Gaps = 27/230 (11%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--------VQ 277
             + +  +      +  D   +   +        I    +S + ++   +          
Sbjct: 182 HPFVSKLNNMKFEDHPFDILENEPYESPLKPFGGIEQLCWSKDSRKIAYTCKKKVGKEYA 241

Query: 278 KDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFES-DREG----KEQ 327
                DIY  D ++  T  L           + +  YSP+  +I + S +R+G    + +
Sbjct: 242 TSTDSDIYIYDTETKTTINLCKDFEPKNYGFDSNPMYSPNGKKIAWISMERDGYESDRSR 301

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ----- 382
           L +   N   +  +S+  E++     W      + FT        I  ++          
Sbjct: 302 LIIFDLNTKKKSFVSEWFESNVESFDWIND-CQMVFTGVWHGTTHIYFIEITNDNELFNH 360

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           E++     + ++  W   G  LI  R+       +LY +DL  +    ++
Sbjct: 361 EQITTGQYDYKSVKW--FGNKLIVKRQSM-IEADELYELDLKTKEIKQVS 407



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 25/170 (14%)

Query: 219 FSPNQQKVAYA-------TYDDEDILRVYLMDTRIDRAPKRIGNFR----SMILAPRFSS 267
           +S + +K+AY         Y       +Y+ DT          +F          P +S 
Sbjct: 221 WSKDSRKIAYTCKKKVGKEYATSTDSDIYIYDTETKTTINLCKDFEPKNYGFDSNPMYSP 280

Query: 268 NGKRAL-ISVQKDE----AMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESD 321
           NGK+   IS+++D        +   DL +     ++     N+ +  +  D  Q+VF   
Sbjct: 281 NGKKIAWISMERDGYESDRSRLIIFDLNTKKKSFVSEWFESNVESFDWINDC-QMVFTGV 339

Query: 322 REGKEQLYVM----QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             G   +Y +     +   + ++I+   +  Y    W   G+ +   + S
Sbjct: 340 WHGTTHIYFIEITNDNELFNHEQITT-GQYDYKSVKW--FGNKLIVKRQS 386



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 62/157 (39%), Gaps = 12/157 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRS 258
            +   P        P +SPN +K+A+ + +      D  R+ + D    +       F S
Sbjct: 262 CKDFEPKNYGFDSNPMYSPNGKKIAWISMERDGYESDRSRLIIFDLNTKKKSFVSEWFES 321

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT----ERLTNTLFINISASYSPDSS 314
            + +  + ++  + + +        IY +++ ++      E++T   +   S  +    +
Sbjct: 322 NVESFDWIND-CQMVFTGVWHGTTHIYFIEITNDNELFNHEQITTGQYDYKSVKWF--GN 378

Query: 315 QIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYF 350
           +++ +       ++LY +     + K++S + +  Y 
Sbjct: 379 KLIVKRQSMIEADELYELDLKTKEIKQVSFENDFIYT 415


>gi|219847023|ref|YP_002461456.1| WD40 repeat-containing serine/threonine protein kinase
           [Chloroflexus aggregans DSM 9485]
 gi|219541282|gb|ACL23020.1| serine/threonine protein kinase with WD40 repeats [Chloroflexus
           aggregans DSM 9485]
          Length = 622

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 72/206 (34%), Gaps = 7/206 (3%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G +     PS    +     SP  Q    AT               +    +R+    S 
Sbjct: 282 GRSAVTAIPSSVPPITPSSVSPPLQADTTATPAQPSTTPSRPTTPPVGTMIRRLITG-SP 340

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + +  FS +GK  L +   D  + ++ V         L        + ++SPD   I   
Sbjct: 341 VRSIAFSPDGKWLL-AGHDDYTVGVWEV-ATGEQKVTLRGHESTVRTVAFSPDGKLIATG 398

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD    E + + +++     +I            +SP G  +A   + G    + ++K++
Sbjct: 399 SD---DETVRIWRTSDWQTLQIIHHPGCPIESVSFSPDGRHLAAGGW-GNAITLYLLKQE 454

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
             +   L     + + ++SP+G  L 
Sbjct: 455 KIEPIGLFSCPFVHSLSFSPNGSFLA 480



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 85/282 (30%), Gaps = 45/282 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH----------------- 156
           G+ +  G D   V   +W+V   +Q +        ++ R +A                  
Sbjct: 350 GKWLLAGHDDYTVG--VWEVATGEQKV--TLRGHESTVRTVAFSPDGKLIATGSDDETVR 405

Query: 157 --TISDDIYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
               SD     I    G     + F  +     +G   N++ +       I  +      
Sbjct: 406 IWRTSDWQTLQIIHHPGCPIESVSFSPDGRHLAAGGWGNAITLYLLKQEKIEPIGLFSCP 465

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +    FSPN   +A   YD      +YL      +A   I  F + I +  F+      
Sbjct: 466 FVHSLSFSPNGSFLAAGCYDG----AIYLWQIADQQALDPISGFNTFIYSVAFNP--AST 519

Query: 273 LISVQKDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQ 327
           +I+      + ++ +     L +     L          ++SP +  +   S DR  +  
Sbjct: 520 IIAASSGTTIRLWRLKDRHPLDT-----LQGHTAPVRELAFSPRAPLLASVSEDRSARF- 573

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                        +  +  A      +SP G L+A     G 
Sbjct: 574 ---WNVEHGQPLPLILEHSAGVSCLNFSPDGQLLATGSHDGR 612


>gi|254416109|ref|ZP_05029864.1| hypothetical protein MC7420_7531 [Microcoleus chthonoplastes PCC
           7420]
 gi|196177042|gb|EDX72051.1| hypothetical protein MC7420_7531 [Microcoleus chthonoplastes PCC
           7420]
          Length = 358

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 74/208 (35%), Gaps = 19/208 (9%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +       + +    +S +   +A ++   E    V L D     +   +G+  +   +
Sbjct: 13  EQQWCGQLSEYVTAVAWSVDG-CLAVSSAAGE----VLLWDGGKGDSCLILGSDDTGEQS 67

Query: 263 PR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                FS +G+    +  +D  + I+ V  Q      L N         +SP  +Q+ F 
Sbjct: 68  IDCLDFSPDGQFLA-AGGQDGGVRIWQVKPQLQRITTLNNAPKWVDHLRWSPTGNQLAFS 126

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             R      YV   +G++Q+ +       +S     W PQG  +A     G K  +   +
Sbjct: 127 LGR------YVQVWDGAEQETMITLPFDLSSVLGMTWQPQGQHLAIAGDQGAK--VWDSR 178

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L+   +   A  WSP G+ L 
Sbjct: 179 NWHDDPYLVNMPAASVAIAWSPDGKYLA 206


>gi|125972530|ref|YP_001036440.1| hypothetical protein Cthe_0005 [Clostridium thermocellum ATCC
           27405]
 gi|281416723|ref|ZP_06247743.1| hypothetical protein Cther_1363 [Clostridium thermocellum JW20]
 gi|125712755|gb|ABN51247.1| hypothetical protein Cthe_0005 [Clostridium thermocellum ATCC
           27405]
 gi|281408125|gb|EFB38383.1| hypothetical protein Cther_1363 [Clostridium thermocellum JW20]
          Length = 285

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 61/180 (33%), Gaps = 21/180 (11%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            N  R    +      +++  D  S    +L    F + S  +     ++++    +  E
Sbjct: 122 PNSDRISFVLD----YELHIYDRSSGTLTKLFEVAFNSYS--WDNTGKKLLYG---DYDE 172

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +Y+     +++++I          PV+S   + IA+    G    + V   +  ++   
Sbjct: 173 NIYIYDMESNEKRKILTG-----ICPVYSNSNEYIAYI---GIDQRLTVYNVNTGKKWRT 224

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKLYSIDL-NGRNETLINTPAYASDPQW 442
           V   +     +SP  + ++   +           LY +D   G+ + L           W
Sbjct: 225 VPVDDSARYIFSPDDKYILLGTEYADLMSFPHYTLYILDYKTGKKKRLFGGEGNVPSLDW 284


>gi|302510757|ref|XP_003017330.1| hypothetical protein ARB_04210 [Arthroderma benhamiae CBS 112371]
 gi|291180901|gb|EFE36685.1| hypothetical protein ARB_04210 [Arthroderma benhamiae CBS 112371]
          Length = 814

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 71/202 (35%), Gaps = 18/202 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S +++ VA A+    D L V +++       K + +    +    F  +G+   +S  
Sbjct: 93  AISKDEEWVAVAS----DELTVKIVNINDITEVKYLRDQTKGVKHVTFDPSGRFITVS-C 147

Query: 278 KDEAMDIYS--------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            D  + IYS        +        +L        SA + PD +   F +    ++   
Sbjct: 148 ADGIIYIYSFTETEPTLLHKLDGVIRQLETDNEATSSAVWHPDGT--AFAAVEATRDITV 205

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +   + + Q++ S           WSP G ++A    +G    I + +    +     + 
Sbjct: 206 ISCRDWTKQRKFSGGHNGDVTCLAWSPNGAMLA---SAGADRKILLWETRTQKVIKTYDI 262

Query: 390 SNLQAPTWSPSGRSLIFSRKKD 411
            N+    W P+   + F+    
Sbjct: 263 PNVINFRWHPTQNIVAFTTSDG 284


>gi|89890649|ref|ZP_01202159.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
 gi|89517564|gb|EAS20221.1| conserved hypothetical protein [Flavobacteria bacterium BBFL7]
          Length = 663

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/222 (22%), Positives = 86/222 (38%), Gaps = 62/222 (27%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFI-----NISASYSPDSSQIVFESDREGKE------- 326
           D+   +  +D QS   E + NT+ I     +   SY   +SQ+V+ + R+          
Sbjct: 131 DQPDYLQIIDFQSGRFE-IENTVAINSTTADFGPSYYGGASQVVYATARDTNSFVKRTHS 189

Query: 327 -------QLYVMQSNG----SDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAI 373
                  QLY+  ++     S+++R+S      Y +  P ++  G+ + FT+ +     +
Sbjct: 190 WNDQAFLQLYIADADEAGKLSNEERLSNVLNTRYHESTPAFTSDGNTVYFTRNNYSA-GV 248

Query: 374 GVMKKDG----------------SQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                DG                S+   L    ++ ++  P  SP G+ L F+    G  
Sbjct: 249 YRQDIDGINKLKIYKSTKKGKSWSEPIELPFCNDEYSVAHPALSPDGKYLYFASDMPGSM 308

Query: 415 G---------SKLYSIDL--NG-----RNETLINTPAYASDP 440
           G         S L+ I++  +G     RN T INT    S P
Sbjct: 309 GYDSNDEFTKSDLWVIEIKEDGSFGELRNLTEINTEGRESFP 350



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 72/258 (27%), Gaps = 51/258 (19%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD----GANIRYLTPSRDQIL 214
           +  +  +   +   F  R         +      L + D D     +N   L+   +   
Sbjct: 169 ASQVVYATARDTNSFVKR-----THSWNDQAFLQLYIADADEAGKLSNEERLSNVLNTRY 223

Query: 215 FE--PRFSPNQQKVAYATYDDE-----------DILRVYLMDTRIDRAPKRIG----NFR 257
            E  P F+ +   V +   +             + L++Y    +     + I     N  
Sbjct: 224 HESTPAFTSDGNTVYFTRNNYSAGVYRQDIDGINKLKIYKSTKKGKSWSEPIELPFCNDE 283

Query: 258 SMILAPRFSSNGKRALISVQKDEA-----------MDIYSV----DLQSNATERLT--NT 300
             +  P  S +GK    +     +            D++ +    D        LT  NT
Sbjct: 284 YSVAHPALSPDGKYLYFASDMPGSMGYDSNDEFTKSDLWVIEIKEDGSFGELRNLTEINT 343

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYV----MQSNGSDQKRISQDKEAS----YFDP 352
                    S         S  +G   L +    +  +G+    I+  K A+     F  
Sbjct: 344 EGRESFPFVSKKGILYFASSGHQGLGGLDIFASSINPDGTLSLPINIGKPANTEDDDFAF 403

Query: 353 VWSPQGDLIAFTKFSGEK 370
           + +   ++  F+      
Sbjct: 404 IINDDTNMGYFSSNRPGG 421


>gi|49479201|ref|YP_034515.1| prolyl oligopeptidase family protein [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|49330757|gb|AAT61403.1| prolyl oligopeptidase family (peptidase_S9) [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 655

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 9/100 (9%)

Query: 354 WSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  G  +AF K +        +  + + +KD G    L   D +   P WSP  +S+ +
Sbjct: 26  ISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIAY 85

Query: 407 -SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            S   DGD  ++++   L+  +E  + +     S+ +W  
Sbjct: 86  LSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFKWDP 125



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/281 (11%), Positives = 84/281 (29%), Gaps = 54/281 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     +       + P +S + K   
Sbjct: 25  NISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIA 84

Query: 274 ISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------EG 324
                 +      I+   L   +  ++T+      +  + P      + +        + 
Sbjct: 85  YLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFKWDPTGKGFYYITQSKECEEIKK 144

Query: 325 KEQLY----------------------VMQSNGSDQK-----RISQDKEASYFDPVWSPQ 357
           +++LY                      V+Q++  +++     +++  K+    +   S  
Sbjct: 145 RKELYGDFQHVGKEHQNNCLCYIEIEKVIQNDKGERENNGVYQLTDGKDFYIHNFDISND 204

Query: 358 GDLIAFTK----FSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS----- 407
           G  I               + ++  +  + + + ++     +  +SP G  + +S     
Sbjct: 205 GKNIVCVANPSLNDHMNGDLYILDVEAGELQKMNIDKLLGGSVCFSPEGNKICYSASIRE 264

Query: 408 ----RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               R    ++  ++Y ++     + L N  +     QW  
Sbjct: 265 KDYYRNHIQESTLEIYDMNAGEVIQPLTNFDSTVMPLQWTA 305



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 10/119 (8%)

Query: 260 ILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           +L+   S +GK      +            ++  +     +  LT     +I   +SPDS
Sbjct: 21  VLSTNISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDS 80

Query: 314 SQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             I + S   D + K Q++V   +   + +I+ +KE    +  W P G    +   S E
Sbjct: 81  KSIAYLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEG-VSNFKWDPTGKGFYYITQSKE 138



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 103/307 (33%), Gaps = 60/307 (19%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDD 233
           + FV  +        +N + + ++D     Y   + D     P +SP+ + +AY ++  D
Sbjct: 33  VAFVKRTANWEDNTYRNHVWIYEKD-KGKSYPLTTGDIDSIHPLWSPDSKSIAYLSSGGD 91

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
            D+     + +  D +  +I + +  +   ++   GK      Q                
Sbjct: 92  GDMKNQIFVKSLDDYSEVKITDEKEGVSNFKWDPTGKGFYYITQSKECEEIKKRKELYGD 151

Query: 278 ------KDEAMDIYSVDL-----------QSNATERLTNTLFINISAS-YSPDSSQIVFE 319
                 + +   +  +++           ++N   +LT+     I     S D   IV  
Sbjct: 152 FQHVGKEHQNNCLCYIEIEKVIQNDKGERENNGVYQLTDGKDFYIHNFDISNDGKNIVCV 211

Query: 320 SDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           ++    +     LY++     + ++++ DK        +SP+G+ I ++           
Sbjct: 212 ANPSLNDHMNGDLYILDVEAGELQKMNIDKLLG-GSVCFSPEGNKICYSASIREKDYYRN 270

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I  M   G   + L    +   P  W+  G  + +       T   +  +  
Sbjct: 271 HIQESTLEIYDMNA-GEVIQPLTNFDSTVMPLQWTAKGILIRW----QDKTNYLIGLLAE 325

Query: 424 NGRNETL 430
           +G  ETL
Sbjct: 326 DGTVETL 332


>gi|5410332|gb|AAD43036.1| WSB-1 [Homo sapiens]
          Length = 421

 Score = 58.1 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 69/204 (33%), Gaps = 28/204 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++     + +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTLAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC---PVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +      + +         +L+E  +L  P                 ++S  
Sbjct: 268 GALLATASYDT---RVYIWDPHNGD--ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHD 322

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   + + ID +
Sbjct: 323 GLHVA---SLADDKMVRFWRIDED 343



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 84/259 (32%), Gaps = 47/259 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++             + HT   ++ + +T      +  ++ VS S   
Sbjct: 151 RIKIWDVYTGKLLLNL-----------VDHT---EVVRDLTLAP---DGSLILVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L +   
Sbjct: 194 TL---RVWDLKDDG-NMMKVLRGHQNWVYSCAFSPDSSMLC----PVGASKAVFLWNMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++      ++A  FS +G     +   D  + I+  D  +               
Sbjct: 246 YTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFPPPT 302

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +      +    S S+S D   +   +D +   + + +  +     +++          
Sbjct: 303 PIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG--LCC 357

Query: 353 VWSPQGDLIAFTKFSGEKF 371
            +S  G ++A     G  +
Sbjct: 358 AFSTDGSVLAAGTHDGSVY 376



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 56/139 (40%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L +   +    + +PD S I+  + R+   +++ 
Sbjct: 142 LLATGLNNGRIKIW--DVYTGKLLLNLVDHTEVVRDLTLAPDGSLILVSASRDKTLRVWD 199

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K + +  +   +   +SP   ++     S   F +  M K     +L     
Sbjct: 200 LKDDGNMMKVL-RGHQNWVYSCAFSPDSSMLCPVGASKAVF-LWNMDKYTMIRKLEGHHH 257

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ A  +SP G  L  +  
Sbjct: 258 DVVACDFSPDGALLATASY 276


>gi|303240405|ref|ZP_07326923.1| hypothetical protein AceceDRAFT_2271 [Acetivibrio cellulolyticus
           CD2]
 gi|302592132|gb|EFL61862.1| hypothetical protein AceceDRAFT_2271 [Acetivibrio cellulolyticus
           CD2]
          Length = 584

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 102/291 (35%), Gaps = 34/291 (11%)

Query: 176 RILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD- 233
           ++LF SE          L VM+  DG   +  +     + +  +FSP+ ++VA   +   
Sbjct: 69  KLLFYSEGTAKSDSVKELYVMNLTDGFCSKIWSEDG-IVEYIAKFSPDGERVAVLPFSGV 127

Query: 234 -EDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDL 289
                 ++L++       +        I+     R+SS+G+  L +    +   I+  D 
Sbjct: 128 CTQKQLLFLVNLEEGEIKEPAFKTFGSIIQGTEIRWSSDGESLLATGWNGKNDKIFIFDK 187

Query: 290 QSNATERL-------TNTLFIN---ISASYSPDSSQIVFESDREGKEQLYV-MQSNGSDQ 338
           +      L        NT   +          D S I++    EG   +   ++++  ++
Sbjct: 188 EGQEKYSLDSKQYSVLNTSGGDFCKTQNIQFYDKSTILYA---EGDNIILKEIKNDTLEK 244

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE------DSNL 392
              S+ K  + +    SP    IA++    +   +  +   G     L         S  
Sbjct: 245 ICFSERKIVNGYSFEISPDKKYIAYSLKVDQTNYVIKVDLLGEDFMPLYTVSELKISSPE 304

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQW 442
               WS   + L +         + +++I+L  R N+ +I         +W
Sbjct: 305 PVYAWSSDSKYLTYFND------NAIWNINLGTRENKKIITNMGRVCKIRW 349



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 86/254 (33%), Gaps = 37/254 (14%)

Query: 220 SPNQQKVAYATYDDEDILRV---YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--- 273
           S + +K+ + +        V   Y+M+       K       +    +FS +G+R     
Sbjct: 64  SSDGEKLLFYSEGTAKSDSVKELYVMNLTDGFCSKIWSEDGIVEYIAKFSPDGERVAVLP 123

Query: 274 ISVQKDEAMDIYSVDLQSNATERL---TNTLFIN-ISASYSPDSSQIVFESDREGKEQLY 329
            S    +   ++ V+L+    +     T    I      +S D   ++        ++++
Sbjct: 124 FSGVCTQKQLLFLVNLEEGEIKEPAFKTFGSIIQGTEIRWSSDGESLLATGWNGKNDKIF 183

Query: 330 VMQSNGSDQKRI---------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +    G ++  +         +   +      +       I +    G+   +  +K D 
Sbjct: 184 IFDKEGQEKYSLDSKQYSVLNTSGGDFCKTQNIQFYDKSTILYA--EGDNIILKEIKNDT 241

Query: 381 SQ-----ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +     ER +V   + +    SP  + + +S K   D  + +  +DL G +   + T +
Sbjct: 242 LEKICFSERKIVNGYSFE---ISPDKKYIAYSLKV--DQTNYVIKVDLLGEDFMPLYTVS 296

Query: 436 Y----ASDP--QWV 443
                + +P   W 
Sbjct: 297 ELKISSPEPVYAWS 310


>gi|312195343|ref|YP_004015404.1| hypothetical protein FraEuI1c_1471 [Frankia sp. EuI1c]
 gi|311226679|gb|ADP79534.1| hypothetical protein FraEuI1c_1471 [Frankia sp. EuI1c]
          Length = 641

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 61/209 (29%), Gaps = 41/209 (19%)

Query: 265 FSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           FS +GK        DE   +D+++ DL +    RLT+          SPD    V    R
Sbjct: 300 FSKDGKEVTYIGYPDESSNIDVFAADLTTGKVRRLTSNPEYTDPIDLSPDGDWTVAMDTR 359

Query: 323 EGKEQLYVMQSNG----------SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               Q ++    G               +  +    +F P+       +         + 
Sbjct: 360 GSDRQEFLAGMRGIPPITDLVTPGAVSSVRNNGTRRFFQPI-------LIDRYGDRGTYQ 412

Query: 373 IGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIF-------------------SRKK 410
              +   G      V D N      P WSP G ++++                   +  +
Sbjct: 413 GQQINAAGDGSPGAVNDPNWNGEADPRWSPDGTAVVYWQALATPPACGGANPLTCETSTE 472

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASD 439
            G   ++L       R      T A  SD
Sbjct: 473 PGGRTARLMIATFTSRKPAPAPTVAPISD 501



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 13/179 (7%)

Query: 195 VMDRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            +  D A+   LT +R+ I       FS + ++V Y  Y DE                +R
Sbjct: 274 TVYVDPAHPGQLTINRNAISVGELRGFSKDGKEVTYIGYPDESSNIDVFAADLTTGKVRR 333

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + +          S +G   +    +      +   ++      +T+ +     +S   +
Sbjct: 334 LTSNPEYTDPIDLSPDGDWTVAMDTRGSDRQEFLAGMRG--IPPITDLVTPGAVSSVRNN 391

Query: 313 SSQIVFE-------SDREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQGDLIAF 363
            ++  F+        DR G  Q   + + G        D   +   DP WSP G  + +
Sbjct: 392 GTRRFFQPILIDRYGDR-GTYQGQQINAAGDGSPGAVNDPNWNGEADPRWSPDGTAVVY 449


>gi|284990981|ref|YP_003409535.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Geodermatophilus obscurus DSM 43160]
 gi|284064226|gb|ADB75164.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geodermatophilus obscurus DSM 43160]
          Length = 607

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 75/198 (37%), Gaps = 19/198 (9%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQS------NATERLT-NTL 301
           + +      ++  R+    ++A++    D      ++ +DL +      +    LT  + 
Sbjct: 42  RHLPAVDDRVITARYRPGHRQAVVEADTDGDERSRLWLLDLDAPAGRDRSTPRALTARSG 101

Query: 302 FINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            ++  A  SPD   +   S+R       ++++  +   Q+ + +        P +S  G 
Sbjct: 102 AVDRLAGVSPDGGTVAVLSNRRDPVAFDVWLLDLDSGAQRLLHRSGSWCQPAPGFSADGH 161

Query: 360 LIAFTKFSGEKF--AIGVMKKDGSQERLLVEDSN----LQAPTWSPSGRSLIFSRKKDGD 413
            ++  +         + ++     ++R+++  ++    + AP W     +L+ S    G 
Sbjct: 162 WLSILRPGPRPMDNDLVLLDVATGEQRVVLPHADEAAVVGAPAW-VDATTLVVSSNV-GR 219

Query: 414 TGSKLYSIDLNGRNETLI 431
             S L  +DL      ++
Sbjct: 220 DHSALVRVDLATDEAAVV 237



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 74/235 (31%), Gaps = 19/235 (8%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG------AN 202
           A W    H     +   +   +         V E+   G  ++ L ++D D       + 
Sbjct: 34  AEWHAGVHRHLPAVDDRVITAR-YRPGHRQAVVEADTDGDERSRLWLLDLDAPAGRDRST 92

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--I 260
            R LT     +      SP+   VA  + +  D +   +    +D   +R+ +       
Sbjct: 93  PRALTARSGAVDRLAGVSPDGGTVAVLS-NRRDPVAFDVWLLDLDSGAQRLLHRSGSWCQ 151

Query: 261 LAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQ 315
            AP FS++G    I     +    D+  +D+ +     +    +   +  + ++  D++ 
Sbjct: 152 PAPGFSADGHWLSILRPGPRPMDNDLVLLDVATGEQRVVLPHADEAAVVGAPAWV-DATT 210

Query: 316 IVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +V  S+       L  +     +   +             SP G  +        
Sbjct: 211 LVVSSNVGRDHSALVRVDLATDEAAVVYARDRDVAGWT--SPDGTRLLAVGNVDG 263



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/237 (13%), Positives = 74/237 (31%), Gaps = 13/237 (5%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G           S     +   + ++D D    R L  S       P FS +   ++   
Sbjct: 108 GVSPDGGTVAVLSNRRDPVAFDVWLLDLDSGAQRLLHRSGSWCQPAPGFSADGHWLSILR 167

Query: 231 YDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALISVQKD-EAMDIYS 286
                +    ++        + +    +  +++ AP +  +    ++S     +   +  
Sbjct: 168 PGPRPMDNDLVLLDVATGEQRVVLPHADEAAVVGAPAW-VDATTLVVSSNVGRDHSALVR 226

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRIS-QD 344
           VDL ++    +      +++   SPD ++++   + +G     ++ +   +   R+   D
Sbjct: 227 VDLATDEAAVV-YARDRDVAGWTSPDGTRLLAVGNVDGASVGELLDARTLAPLGRLRLPD 285

Query: 345 KEASYFDPVWSPQ----GDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPT 396
            +A        P      D       +      GV + D G+    L        P 
Sbjct: 286 PDAVVAWSHLLPDPLVGNDGSVVVTCTSPVMPPGVWRLDPGAPPHRLTGARLDVEPR 342



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 43/305 (14%), Positives = 89/305 (29%), Gaps = 42/305 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G V      R  V F +W                 +  +++ H              G  
Sbjct: 114 GTVAVLSNRRDPVAFDVW------------LLDLDSGAQRLLHRSGSW----CQPAPGFS 157

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ--ILFEPRFSPNQQKVAYATY 231
                          + N L ++D      R + P  D+  ++  P +  +   +  ++ 
Sbjct: 158 ADGHWLSILRPGPRPMDNDLVLLDVATGEQRVVLPHADEAAVVGAPAWV-DATTLVVSSN 216

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGKRALISVQKDEAMDIYSVDLQ 290
              D   +  +D   D A       R +     + S +G R L     D A     +D +
Sbjct: 217 VGRDHSALVRVDLATDEAAVVYARDRDVAG---WTSPDGTRLLAVGNVDGASVGELLDAR 273

Query: 291 SNATERLTNTLFINISASYSP---------DSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + A          +   ++S          D S +V  +       ++ +   G+   R+
Sbjct: 274 TLAPLGRLRLPDPDAVVAWSHLLPDPLVGNDGSVVVTCTSPVMPPGVWRLDP-GAPPHRL 332

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-----ERLLVEDS--NLQA 394
           +        +P    + +  A T   G    + + + D +        +L+         
Sbjct: 333 T--GARLDVEPRLLRRPERHAVTSADGVTVPLQLYRPDSTAGAAPPVVVLLHGGPEGQSQ 390

Query: 395 PTWSP 399
           P +SP
Sbjct: 391 PVFSP 395



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 48/150 (32%), Gaps = 21/150 (14%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-- 369
           D  +++  +D  G +QL    +      R     +       + P          +    
Sbjct: 17  DGERLLLRTDATGVDQLAEWHA---GVHRHLPAVDDRVITARYRPGHRQAVVEADTDGDE 73

Query: 370 KFAIGVMKKD------GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +  + ++  D       S  R L   S    +    SP G ++     +       ++ +
Sbjct: 74  RSRLWLLDLDAPAGRDRSTPRALTARSGAVDRLAGVSPDGGTVAVLSNRRDPVAFDVWLL 133

Query: 422 DLNGRNETLI--------NTPAYASDPQWV 443
           DL+   + L+          P +++D  W+
Sbjct: 134 DLDSGAQRLLHRSGSWCQPAPGFSADGHWL 163


>gi|225175425|ref|ZP_03729420.1| 40-residue YVTN family beta-propeller repeat protein [Dethiobacter
           alkaliphilus AHT 1]
 gi|225169177|gb|EEG77976.1| 40-residue YVTN family beta-propeller repeat protein [Dethiobacter
           alkaliphilus AHT 1]
          Length = 331

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 69/194 (35%), Gaps = 8/194 (4%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +     D  +I  V     +I            + +    S +G   L++  ++ 
Sbjct: 73  PDNSLLFTGDLDGGNIYVVDTATDQIKNTISVGERVHGIDM----SPDGNYVLVAAGRNS 128

Query: 281 AMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +  ++++       + + L      ++SPD  +  + +D E +  + V+       +
Sbjct: 129 GPSLVVINVELQEVVTVIQDDLVGPTHITFSPDGKR-AYVADPE-QSAVVVVDMVNLVTE 186

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            + Q       +   SPQGDL+    + G    + +   DG     L       A   SP
Sbjct: 187 TVWQTGAEGAQEARTSPQGDLLYVANYEGNMLTV-LDTTDGQVLYSLPAGEETHAVDVSP 245

Query: 400 SGRSLIFSRKKDGD 413
            G+ +  +  K G+
Sbjct: 246 DGQFVWVAASKTGE 259



 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 70/227 (30%), Gaps = 21/227 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRF---------SPNQQKVAYATYDDEDILRVYLMD 243
           L   D DG NI  +  + DQI               SP+   V  A   +     V +  
Sbjct: 78  LFTGDLDGGNIYVVDTATDQIKNTISVGERVHGIDMSPDGNYVLVAAGRNSGPSLVVINV 137

Query: 244 TRIDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                  + +   +  ++ P    FS +GKR       +++  +    +           
Sbjct: 138 ----ELQEVVTVIQDDLVGPTHITFSPDGKR-AYVADPEQSAVVVVDMVNLVTETVWQTG 192

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 A  SP    +++ ++ EG     +  ++G     +   +E        SP G  
Sbjct: 193 AEGAQEARTSPQGD-LLYVANYEGNMLTVLDTTDGQVLYSLPAGEET--HAVDVSPDGQF 249

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +        +  I  ++ + S    +          + P+G  +  +
Sbjct: 250 VWVAASKTGEIIIFDVENEYSIVDTVT-FGRPNHIKFHPAGNEVYIT 295


>gi|315225314|ref|ZP_07867130.1| dipeptidyl-peptidase IV [Capnocytophaga ochracea F0287]
 gi|314944723|gb|EFS96756.1| dipeptidyl-peptidase IV [Capnocytophaga ochracea F0287]
          Length = 737

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 30/142 (21%)

Query: 219 FSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           FSP+++K+  AT     Y    I   +L D       K++ + R  +  P FS NGK+  
Sbjct: 112 FSPDEKKLLIATRKEDIYRHSFIADYFLYDLATGDL-KKVSDKRIQV--PTFSPNGKQLA 168

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTL------------------FINISASYSPDSSQ 315
              + +    +Y  DL + A  ++T                      I    +++ D +Q
Sbjct: 169 FVYENN----LYLYDLTTGAETQITTDGQKNAIINGTADWVYEEEFGIVRLFAWNADGTQ 224

Query: 316 IVFESDREGKEQLYVMQSNGSD 337
           + F    E K   + M   G D
Sbjct: 225 LAFIRSDERKVPEFSMDIYGYD 246



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 13/101 (12%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQAP 395
           + ++        +SP    +       + +         +        +  V D  +Q P
Sbjct: 100 TNERVNRIESYEFSPDEKKLLIATRKEDIYRHSFIADYFLYDLATGDLKK-VSDKRIQVP 158

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           T+SP+G+ L F  +      + LY  DL    ET I T   
Sbjct: 159 TFSPNGKQLAFVYE------NNLYLYDLTTGAETQITTDGQ 193



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/324 (13%), Positives = 103/324 (31%), Gaps = 63/324 (19%)

Query: 111 LVTGRVIKEGKDRLRV----------------EFRLWDVKDRKQIIGKKFFSSPASWRKI 154
           L TG + K    R++V                   L+D+        +   ++      I
Sbjct: 142 LATGDLKKVSDKRIQVPTFSPNGKQLAFVYENNLYLYDLTTG----AETQITTDGQKNAI 197

Query: 155 AHTISDDIYQSITGEKGDFN-----SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            +  +D +Y+   G    F      +++ F+  S    + + S+ +   D     Y    
Sbjct: 198 INGTADWVYEEEFGIVRLFAWNADGTQLAFI-RSDERKVPEFSMDIYGYDLYPTPYTFKY 256

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRV-----YLMDTRIDRAPKRIGNFRSMILAPR 264
                     S     +   T  D+ +  +     Y+   +    P ++           
Sbjct: 257 PKAGEANSVVS-----LHIYTVADKSVAEIPLKAYYIPRLQWTNDPHKLTVQ-------- 303

Query: 265 FSSNGKRALISVQKDEAMD-IYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVF 318
                     ++ + +    +  V+ Q+ AT  L        + IN    + PD+S  ++
Sbjct: 304 ----------TLNRHQNDWQLLQVNSQTKATTSLVKETSATYVSINKEILFLPDNS-FIY 352

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVM 376
           +S+++G    Y   + G   +++++          + P+   + +        +  +  +
Sbjct: 353 QSEQDGHNHFYYCNAKGKLVRQLTRGNWEVTDCYGYDPKTQQLFYQSTQTGSTRRGLYAV 412

Query: 377 KKDGSQERLLVEDSNLQAPTWSPS 400
              G   R L  ++     T+S  
Sbjct: 413 SLKGKAPRTLSTEAGTNKGTFSGD 436


>gi|256819894|ref|YP_003141173.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Capnocytophaga ochracea DSM 7271]
 gi|256581477|gb|ACU92612.1| peptidase S9B dipeptidylpeptidase IV domain protein [Capnocytophaga
           ochracea DSM 7271]
          Length = 737

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 30/142 (21%)

Query: 219 FSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           FSP+++K+  AT     Y    I   +L D       K++ + R  +  P FS NGK+  
Sbjct: 112 FSPDEKKLLIATRKEDIYRHSFIADYFLYDLATGDL-KKVSDKRIQV--PTFSPNGKQLA 168

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTL------------------FINISASYSPDSSQ 315
              + +    +Y  DL + A  ++T                      I    +++ D +Q
Sbjct: 169 FVYENN----LYLYDLTTGAETQITTDGQKNAIINGTADWVYEEEFGIVRLFAWNADGTQ 224

Query: 316 IVFESDREGKEQLYVMQSNGSD 337
           + F    E K   + M   G D
Sbjct: 225 LAFIRSDERKVPEFSMDIYGYD 246



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 50/362 (13%), Positives = 117/362 (32%), Gaps = 67/362 (18%)

Query: 111 LVTGRVIKEGKDRLRV----------------EFRLWDVKDRKQIIGKKFFSSPASWRKI 154
           L TG + K    R++V                   L+D+        +   ++      I
Sbjct: 142 LATGDLKKVSDKRIQVPTFSPNGKQLAFVYENNLYLYDLTTG----AETQITTDGQKNAI 197

Query: 155 AHTISDDIYQSITGEKGDFN-----SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            +  +D +Y+   G    F      +++ F+  S    + + S+ +   D     Y    
Sbjct: 198 INGTADWVYEEEFGIVRLFAWNADGTQLAFI-RSDERKVPEFSMDIYGYDLYPTPYTFKY 256

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRV-----YLMDTRIDRAPKRIGNFRSMILAPR 264
                     S     +   T  D+ +  +     Y+   +    P ++           
Sbjct: 257 PKAGEANSVVS-----LHIYTVADKSVAEIPLKAYYIPRLQWTNDPHKLTVQ-------- 303

Query: 265 FSSNGKRALISVQKDEAMD-IYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVF 318
                     ++ + +    +  V+ Q+ AT  L        + IN    + PD+S  ++
Sbjct: 304 ----------TLNRHQNDWQLLQVNSQTKATTSLVKETSATYVSINKEILFLPDNS-FIY 352

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVM 376
           +S+++G    Y   + G   +++++          + P+   + +        +  +  +
Sbjct: 353 QSEQDGHNHFYYCNAKGKLVRQLTRGNWEVTDCYGYDPKTQQLFYQSTQTGSTRRGLYAV 412

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID--LNGRNETLINTP 434
              G   R L  ++     T+S  G   ++       T    Y+++   +G+    I T 
Sbjct: 413 NLKGKAPRALSTEAGTNKGTFS--GDYTMYIHAFANATTPPRYTLNDTKSGKQLKEIVTN 470

Query: 435 AY 436
           A 
Sbjct: 471 AE 472



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 13/101 (12%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQAP 395
           + ++        +SP    +       + +         +        +  V D  +Q P
Sbjct: 100 TNERVNRIESYEFSPDEKKLLIATRKEDIYRHSFIADYFLYDLATGDLKK-VSDKRIQVP 158

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           T+SP+G+ L F  +      + LY  DL    ET I T   
Sbjct: 159 TFSPNGKQLAFVYE------NNLYLYDLTTGAETQITTDGQ 193


>gi|332664040|ref|YP_004446828.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332332854|gb|AEE49955.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 651

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 60/203 (29%), Gaps = 26/203 (12%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN---ATERLT--NTLF 302
           + P  I +       P  S++G+  + S       D +    +       E L   NT F
Sbjct: 168 KLPPSINSPEHAEFLPSLSADGQTMVFSRLVQGQEDFFVSKKKEGIWQTAEPLVELNTPF 227

Query: 303 INISASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDK-----EASYFDPV 353
                  SPD   + +    +    G   +YV     S     +         A    P 
Sbjct: 228 NEAGHCLSPDGKTLYYTGCNQAKSLGGCDIYVSYYRDSSWTAPANLGAPINSGAWESLPS 287

Query: 354 WSPQGDLIAFTKFS-----GEKFAIGVMKKDG--SQERLL----VEDSNLQAPTWSPSGR 402
            S  G  + F         G    +     DG  S  R L        + QAP   P G 
Sbjct: 288 ISAAGRAMIFASDRAGGVGGRDLWLSRQLPDGKWSAPRNLGAKVNTKGDEQAPFLHPDGA 347

Query: 403 SLIFSRK-KDGDTGSKLYSIDLN 424
           +L F      G  G  LY   L+
Sbjct: 348 TLYFMSNGHPGMGGFDLYLTRLD 370


>gi|260599196|ref|YP_003211767.1| oligogalacturonide lyase [Cronobacter turicensis z3032]
 gi|260218373|emb|CBA33421.1| Oligogalacturonide lyase [Cronobacter turicensis z3032]
          Length = 392

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 69/228 (30%), Gaps = 41/228 (17%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---M 282
            +  +  +      L       A + I   +  +  P +   +        +        
Sbjct: 157 IFHDFFHKGPHCRLLRVDLQTGASETIHEEKIWLGHPIYRPFDDNTVAFCHEGPHDLVDA 216

Query: 283 DIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQ 338
            ++ V+   +   ++ +           + PD S +V+ S  +GK+   +Y    +    
Sbjct: 217 RMWMVNEDGSNVRKVKDHAEGESCTHEFWVPDGSALVYVSYLKGKQGRTIYRYLPDSGVN 276

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-----------------S 381
           + +      S+    +   G L+      G    + V    G                 S
Sbjct: 277 EELMPIPACSHLMSNF--DGTLLV---GDGSGTPVDVKDTGGYTIDNDPYLYVFDVAQKS 331

Query: 382 QERLLVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKL 418
             R    D++ +            P++SP G +++FS  KDG     L
Sbjct: 332 YYRAARHDTSWETFAGSRQVTHPHPSFSPDGNAILFSTDKDGKPAVYL 379



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 90/284 (31%), Gaps = 33/284 (11%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPS----RDQILFEPRFSPNQQKVAYATYDDEDILR 238
             +   ++  + +    GA +  LTP          ++  F  +   + +A   D     
Sbjct: 3   KGMRVKLQYQVSIDPDTGAEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGH-WN 61

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL- 297
            YL++     A +              S + K            ++    L      R+ 
Sbjct: 62  YYLLNLEQAEAVQLTEGAGDNTFGGFLSPDDKYLYYVKNDRVLREVNLTTLAERDVYRVP 121

Query: 298 ---------------TNTLFINISAS-YSPDSSQIVFESDREGKE--QLYVMQSNGSDQK 339
                          T  + I I+ S Y P S   +F          +L  +       +
Sbjct: 122 EEWVGYGTWVANSDCTKLVGIEIAKSDYVPLSDWKIFHDFFHKGPHCRLLRVDLQTGASE 181

Query: 340 RISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF---AIGVMKKDGSQERLL---VEDSNL 392
            I ++K      P++ P   + +AF            + ++ +DGS  R +    E  + 
Sbjct: 182 TIHEEKIW-LGHPIYRPFDDNTVAFCHEGPHDLVDARMWMVNEDGSNVRKVKDHAEGESC 240

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPA 435
               W P G +L++     G  G  +Y    + G NE L+  PA
Sbjct: 241 THEFWVPDGSALVYVSYLKGKQGRTIYRYLPDSGVNEELMPIPA 284



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 71/209 (33%), Gaps = 25/209 (11%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG+N+R +    +        + P+   + Y +
Sbjct: 197 PFDDNTVAFCHEGPHDLVDARMWMVNEDGSNVRKVKDHAEGESCTHEFWVPDGSALVYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           Y      R +Y          + +       L   F  +G   +     D +     VD+
Sbjct: 257 YLKGKQGRTIYRYLPDSGVNEELMPIPACSHLMSNF--DGTLLV----GDGSGTP--VDV 308

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +       T    I+            VF+     ++  Y    + +  +  +  ++ ++
Sbjct: 309 KD------TGGYTIDNDPYL------YVFDV---AQKSYYRAARHDTSWETFAGSRQVTH 353

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             P +SP G+ I F+     K A+ + K 
Sbjct: 354 PHPSFSPDGNAILFSTDKDGKPAVYLAKL 382



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 72/210 (34%), Gaps = 22/210 (10%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           P  +   R+      F ++G   L + + D   + Y ++L+     +LT     N    +
Sbjct: 28  PPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHWNYYLLNLEQAEAVQLTEGAGDNTFGGF 87

Query: 310 -SPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPV------------- 353
            SPD   + +  +     ++ +      D  R+        ++                 
Sbjct: 88  LSPDDKYLYYVKNDRVLREVNLTTLAERDVYRVPEEWVGYGTWVANSDCTKLVGIEIAKS 147

Query: 354 -WSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSP-SGRSLIFSR 408
            + P  D   F  F  +     +++ D   G+ E +  E   L  P + P    ++ F  
Sbjct: 148 DYVPLSDWKIFHDFFHKGPHCRLLRVDLQTGASETIHEEKIWLGHPIYRPFDDNTVAFCH 207

Query: 409 KKDGDT-GSKLYSIDLNGRNETLINTPAYA 437
           +   D   ++++ ++ +G N   +   A  
Sbjct: 208 EGPHDLVDARMWMVNEDGSNVRKVKDHAEG 237


>gi|194367629|ref|YP_002030239.1| WD40 domain-containing protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194350433|gb|ACF53556.1| WD40 domain protein beta Propeller [Stenotrophomonas maltophilia
           R551-3]
          Length = 290

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 17/163 (10%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR---ISQDKEASYFDPVWS 355
           +T      A+ S D  +IVF    E    L+  +      ++   +         DP +S
Sbjct: 36  STRADEGRATISADGQRIVFARRGEAGWSLWEARVVAGRWQQAQALPVGVAGEARDPYFS 95

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDG----SQERLLVEDSNLQA---PTWSPSGRSLIFSR 408
             G  + F      K A+              +LL  D+  +    P  S  GR L+F+R
Sbjct: 96  RDGRWLLFAAGREGKLALYRAALATDGRLGTAQLLAGDAGRREERGPALSADGRQLLFAR 155

Query: 409 KKDGDTGSKLYSIDLNGRNET-------LINTPAYASDPQWVG 444
           ++    G  L+   L+ +           +N+    +D  W+G
Sbjct: 156 QQGRGAGWDLFVATLDAQGLRGPASALSALNSADDETDGDWLG 198



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 56/173 (32%), Gaps = 17/173 (9%)

Query: 218 RFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             S + Q++ +A   +    +    ++  R  +A             P FS +G+  L +
Sbjct: 45  TISADGQRIVFARRGEAGWSLWEARVVAGRWQQAQALPVGVAGEARDPYFSRDGRWLLFA 104

Query: 276 VQKDEAMDIYSVDLQS----NATERLTNTLF--INISASYSPDSSQIVFESD--REGKEQ 327
             ++  + +Y   L +       + L            + S D  Q++F     R     
Sbjct: 105 AGREGKLALYRAALATDGRLGTAQLLAGDAGRREERGPALSADGRQLLFARQQGRGAGWD 164

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL------IAFTKFSGEKFAIG 374
           L+V   +    +  +    A       +  GD       + F++ +G    + 
Sbjct: 165 LFVATLDAQGLRGPASALSALNSADDET-DGDWLGHDGAVVFSRGNGTTTQVW 216



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 53/167 (31%), Gaps = 13/167 (7%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            RI+F +    +G       V+       + L         +P FS + + + +A   + 
Sbjct: 51  QRIVF-ARRGEAGWSLWEARVVAGRWQQAQALPVGVAGEARDPYFSRDGRWLLFAAGREG 109

Query: 235 D--ILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAM----DIYS 286
              + R  L         + +           P  S++G++ L + Q+         + +
Sbjct: 110 KLALYRAALATDGRLGTAQLLAGDAGRREERGPALSADGRQLLFARQQGRGAGWDLFVAT 169

Query: 287 VDLQS--NATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +D Q        L+  N+        +      +VF        Q++
Sbjct: 170 LDAQGLRGPASALSALNSADDETDGDWLGHDGAVVFSRGNGTTTQVW 216


>gi|261408221|ref|YP_003244462.1| hypothetical protein GYMC10_4430 [Paenibacillus sp. Y412MC10]
 gi|261284684|gb|ACX66655.1| conserved hypothetical protein [Paenibacillus sp. Y412MC10]
          Length = 402

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 50/351 (14%), Positives = 108/351 (30%), Gaps = 41/351 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR    G+ +L V     D    +   G++   +        H I+    ++   E    
Sbjct: 49  GRGKTPGERKLTV----VDGASGQ--AGREVVVNQT------HRIASSNIETWISEDMVR 96

Query: 174 NSRILFVSESVVSGIIKNSLC---VMDRDGANIRYLTPSRDQI---LFEPRFSPNQQKVA 227
            +    V E+  +   K +     V    G                L +   SP+ +   
Sbjct: 97  VTTTKMVKEATATEEPKYAYATEEVNVSTGERRELTNHEASHPGQHLVKEEVSPDGKYSF 156

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D+     ++ D    ++    G+   M +     ++    L +       +I  +
Sbjct: 157 VQKWRDKYTADNFMKDLNTGKSIPVKGD-NYMEIGGWLDAD-TYVLAAGSMSGKGEIRLI 214

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                 T        + +   +     +I +    +  + L V++   S    + +    
Sbjct: 215 STDGTYTTTAIEDEDVEVYNQFGASKGRIYYT---DANQVLKVVEPGQSKPVHLIE---- 267

Query: 348 SYFDPVWSPQGDLIAFTKFSGE----KFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGR 402
           + +    SP G+ IA +  +         + +    GS Q  L+ + + +  P+WSP   
Sbjct: 268 NVWSFTISPDGEYIAVSTATNTEGNSGSNLLIYDAAGSLQGSLIGKGNLISYPSWSPDSA 327

Query: 403 SLIFSRKKDGDTGSK-LYSIDLNGRNETLINTPAYASDPQ--------WVG 444
            L F    + ++G   +Y  D      + +     A  P         W  
Sbjct: 328 RLAFDVYSENESGMNGVYVFDTASGKVSWMAPYYSAVHPAAHPVYPLTWSP 378



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 48/110 (43%), Gaps = 9/110 (8%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY--ATYDD 233
            I   + +   G   ++L + D  G+ ++     +  ++  P +SP+  ++A+   + ++
Sbjct: 280 YIAVSTATNTEGNSGSNLLIYDAAGS-LQGSLIGKGNLISYPSWSPDSARLAFDVYSENE 338

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAP------RFSSNGKRALISVQ 277
             +  VY+ DT   +       + ++  A        +S +GKR  I++ 
Sbjct: 339 SGMNGVYVFDTASGKVSWMAPYYSAVHPAAHPVYPLTWSPSGKRLGITID 388



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 41/115 (35%), Gaps = 16/115 (13%)

Query: 305 ISASYSPDSSQIVFES--DREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            S + SPD   I   +  + EG     L +  + GS Q  +   K      P WSP    
Sbjct: 270 WSFTISPDGEYIAVSTATNTEGNSGSNLLIYDAAGSLQGSLI-GKGNLISYPSWSPDSAR 328

Query: 361 IAF---TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSL 404
           +AF   ++       + V      +   +    +   P        TWSPSG+ L
Sbjct: 329 LAFDVYSENESGMNGVYVFDTASGKVSWMAPYYSAVHPAAHPVYPLTWSPSGKRL 383


>gi|115727471|ref|XP_001196719.1| PREDICTED: similar to WD repeat domain 26 [Strongylocentrotus
           purpuratus]
 gi|115935384|ref|XP_001186829.1| PREDICTED: similar to WD repeat domain 26 [Strongylocentrotus
           purpuratus]
          Length = 571

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 80/221 (36%), Gaps = 16/221 (7%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +       ++  +FSP+  K+A  + D   I+   + +T   +  K +      +   
Sbjct: 264 HQVLHDHCDEVWYCKFSPDGTKLATGSKDMTVIIWDVIKETLEIKKKKTLEGHAFGVSFL 323

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S + +  ++   +D + +++  + ++   +   +    +   SAS++ D  + V    
Sbjct: 324 AWSPDSRYLIVCGPED-SSELWVWNAETGEVKTKMSQSPEDCLTSASWNSDCRRFVTGGT 382

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG- 380
           R    Q Y    +G+    +   +            G  +     +     I     D  
Sbjct: 383 RG---QFYQCDLDGN---VLDTWEGVRVQCLCMKKDGKRVL---AADTHHRIRAYNFDDL 433

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + + +L ED ++ + T S + R  + S    G     L+ I
Sbjct: 434 TDQHVLQEDHSIMSFTISSNERQALLSVAYQG---VHLWDI 471


>gi|146309678|ref|YP_001174752.1| putative ATP/GTP-binding protein [Enterobacter sp. 638]
 gi|145316554|gb|ABP58701.1| putative ATP/GTP-binding protein [Enterobacter sp. 638]
          Length = 408

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 54/157 (34%), Gaps = 20/157 (12%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFI------NISASY---SPDSSQIVF-ESDREGKEQL 328
           +   D            RLT T         N+   +    P + +I F   D  G  QL
Sbjct: 254 EGTADKMPAPPAGVVQRRLTFTHQNRFPGLVNVPRHWVRSHPQAKEIAFLMRDDNGVVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G + ++++ +         W P GD + F   +     I +      +   L  
Sbjct: 314 WLIAPEGGEPRQLTHNASDIQSAFNWHPSGDALGFVLEN----RIALADSLTGKVTFLTS 369

Query: 389 DSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           D        A  +SP+G+ + +  +  G    +L+  
Sbjct: 370 DHGNPPSGDAIVFSPNGQLIAWMEETAGFR--QLWVT 404



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 11/131 (8%)

Query: 208 PSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                ++  PR      P  +++A+   DD  +++++L+        +   N   +  A 
Sbjct: 278 NRFPGLVNVPRHWVRSHPQAKEIAFLMRDDNGVVQLWLIAPEGGEPRQLTHNASDIQSAF 337

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFES 320
            +  +G      ++      I   D  +     LT+      S     +SP+   I +  
Sbjct: 338 NWHPSGDALGFVLEN----RIALADSLTGKVTFLTSDHGNPPSGDAIVFSPNGQLIAWME 393

Query: 321 DREGKEQLYVM 331
           +  G  QL+V 
Sbjct: 394 ETAGFRQLWVT 404



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 32/97 (32%), Gaps = 7/97 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L ++  +G   R LT +   I     + P+   + +   +     R+ L D+   +   
Sbjct: 312 QLWLIAPEGGEPRQLTHNASDIQSAFNWHPSGDALGFVLEN-----RIALADSLTGKVTF 366

Query: 252 RIGNF--RSMILAPRFSSNGKRALISVQKDEAMDIYS 286
              +        A  FS NG+      +      ++ 
Sbjct: 367 LTSDHGNPPSGDAIVFSPNGQLIAWMEETAGFRQLWV 403


>gi|298241227|ref|ZP_06965034.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
            racemifer DSM 44963]
 gi|297554281|gb|EFH88145.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
            racemifer DSM 44963]
          Length = 1232

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 97/319 (30%), Gaps = 49/319 (15%)

Query: 112  VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
            V G           +   LW+VK  + +            R   H      ++  T    
Sbjct: 848  VNGNWSASSGSDGVI--WLWEVKAGRYL-----------QRFKGH------HERATAIGI 888

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
              + R L      VSG    ++ + +        +       +     S + + +A  ++
Sbjct: 889  SSDGRFL------VSGSSDATIRLWETATGRCLRIFQGHTGSVTSVSISGDGRWIASGSW 942

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRS---MILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            D      + L +T   R  + +   R+    + +   S +G     S  +D    ++   
Sbjct: 943  DR----TIRLWETSTGRCLRILEGHRNGYTAVTSVSLSRDGCWIASSSGEDPVARVWET- 997

Query: 289  LQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                   +L +      ++   + + S +V      G  QL+ + +       +      
Sbjct: 998  ATGRCVHQLIDHSRSTVMTVDLNANGSLLV-CGCSNGTIQLWEVANE--RCLHVLTGHVK 1054

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
                   S     I      G+   + + +    +    +E     + + + S  GR ++
Sbjct: 1055 GVNGLRLSSDERWIV---SGGDDCTVRLWEATTGRCVYTLEGHGYGVTSVSLSSDGRWIV 1111

Query: 406  FSRKKDGDTGS--KLYSID 422
                  G  GS  +L+ +D
Sbjct: 1112 -----SGTCGSTARLWELD 1125


>gi|325110573|ref|YP_004271641.1| hypothetical protein Plabr_4042 [Planctomyces brasiliensis DSM 5305]
 gi|324970841|gb|ADY61619.1| serine/threonine protein kinase with WD40 repeats [Planctomyces
            brasiliensis DSM 5305]
          Length = 1696

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 71/186 (38%), Gaps = 10/186 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG   N++ V   D           D  +   + SP+ + V   + D   IL        
Sbjct: 1008 SGAQDNAVRVWKLDTGRSIKTFRGHDSAVRACQISPDGKFVYSGSEDQTAILWSVNDYAE 1067

Query: 246  IDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLF 302
            I   A + +      IL+  FS +GK  +++  +D +  I+  D ++   E+L      F
Sbjct: 1068 IHTLAGQDLSGHADAILSAYFSPSGKE-VVTASRDRSARIW--DTRTGQEEQLLTEGHEF 1124

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            ++ SA +  D   +V  +  +   +++   + GS+ +R+     A+      S     +A
Sbjct: 1125 LSSSAVFLNDEQYLV-TAAADNSVRIWNTST-GSEVRRLQATGRAALLAA--SDDSQWLA 1180

Query: 363  FTKFSG 368
                  
Sbjct: 1181 TGSDQD 1186



 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 75/224 (33%), Gaps = 40/224 (17%)

Query: 109  QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            Q +VTG     G D      RLWD +   ++  K++       +++    S D  Q +T 
Sbjct: 1489 QFIVTG-----GDDGYA---RLWDARTGAEL--KQYAGKSGDIKRVI--FSPDDKQILTA 1536

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                                   +L + DR  G             +    FS +  ++ 
Sbjct: 1537 SS-------------------DRTLRLWDRETGEEQGDPFRGHRWAVLSADFSSDGSRLV 1577

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + D+    R  L D    +    +    + + +  FS + +R +++  +D    ++ V
Sbjct: 1578 SCSEDN----RAILWDVATRQPIVELSGHTAAVTSVCFSPDDQR-VMTASRDNTAKLWDV 1632

Query: 288  DLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLY 329
                   E LT         +  +S D  Q    + R+G   L+
Sbjct: 1633 SAGHEGNEILTLKRHTQEVTAVDFSADELQ-ALTASRDGSAILW 1675



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 242  MDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            +D         IG      ++     S +G+R L     D  +      L +   ER++ 
Sbjct: 1376 LDLTDGELTTLIGGNQHGGLMWTSVLSRDGRRILTVGGVDSRLWE----LATG-EERMSF 1430

Query: 300  TLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                 ++A+  +P    +V     +   + + + ++G   ++ISQ  +       +S  G
Sbjct: 1431 GPHGAVAATDINPTGEVVV-TGSWDHSLKFWDV-ASGKTIRKISQAHDGYINSVAYSHDG 1488

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              I  T        +   +     ++   +  +++   +SP  + ++ +     D   +L
Sbjct: 1489 QFIV-TGGDDGYARLWDARTGAELKQYAGKSGDIKRVIFSPDDKQILTASS---DRTLRL 1544

Query: 419  YS 420
            + 
Sbjct: 1545 WD 1546



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 40/300 (13%), Positives = 93/300 (31%), Gaps = 49/300 (16%)

Query: 151  WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
             R++ H     IY             +L VS S  S     +L   + +           
Sbjct: 785  LRELVH---SSIYVHAADWS---KDGLLIVSGSADSDG---NLKFWNAETGEKIAAINGH 835

Query: 211  DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-------LAP 263
            +  +     S +++ +   +YD+       L +      P+ +                 
Sbjct: 836  EDAVIGVTISADRRWLVSCSYDN----TAKLWNIENPAQPELMTTLVGHNWWVWDAAFQS 891

Query: 264  RFSSN-GKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFE 319
             F    G+  +++V +D    ++ +   + +               + +Y P   +I   
Sbjct: 892  GFDPAAGRNRIVTVSQDGKAIVWELSENARSARPSVEFLEHDGPVYTVAYHPTKERIA-- 949

Query: 320  SDREGKEQ-LYVMQSNGSDQ---------KRISQDKEASYFDPV-------WSPQGDLIA 362
                G ++ ++    +             +R+   K  +    +       +S QGDL+ 
Sbjct: 950  --TGGYDRKIHYWDPDVIQPFDFEAAVAGRRVPDQKYRTLSGHIGPVRCLEFSDQGDLLI 1007

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +        +  +    S +     DS ++A   SP G+ +        D  + L+S++
Sbjct: 1008 -SGAQDNAVRVWKLDTGRSIKTFRGHDSAVRACQISPDGKFVY---SGSEDQTAILWSVN 1063



 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 71/214 (33%), Gaps = 44/214 (20%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+  + A A++D     RV + D       + + +    + A  +S +G   ++S   D 
Sbjct: 760 PDGSRFATASWDG----RVRIWDRETGDILRELVHSSIYVHAADWSKDG-LLIVSGSADS 814

Query: 281 AMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             ++   + ++       N      I  + S D   +V  S  +   +L+ ++ N +  +
Sbjct: 815 DGNLKFWNAETGEKIAAINGHEDAVIGVTISADRRWLVSCSY-DNTAKLWNIE-NPAQPE 872

Query: 340 RISQDKEASY----------FDPV--------WSPQGDLIA---------------FTKF 366
            ++     ++          FDP          S  G  I                F + 
Sbjct: 873 LMTTLVGHNWWVWDAAFQSGFDPAAGRNRIVTVSQDGKAIVWELSENARSARPSVEFLEH 932

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            G  + +       ++ER+     + +   W P 
Sbjct: 933 DGPVYTVAYHP---TKERIATGGYDRKIHYWDPD 963


>gi|87116374|dbj|BAE79346.1| aminopeptidase [Streptomyces morookaensis]
          Length = 662

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 83/273 (30%), Gaps = 39/273 (14%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN------IRYLTPSRDQILFEPRF 219
           +  E+G+        +    S + +  L  +  DG+       +R L+    + +  PR 
Sbjct: 137 LLPERGEVWCMAEEFTGEGPSDVRRF-LAAVPLDGSAAADRSAVRELSDDAHRFVTGPRL 195

Query: 220 SPNQQKVAYATYDDEDILR--------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           SP+ ++  +  +D   +              D R       +G     I    ++ +G  
Sbjct: 196 SPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDG-S 254

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-------FESDREG 324
            +++  +    +++ VD  + A  +L           ++P                  +G
Sbjct: 255 LIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKG 314

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              L ++     +   +      + +    +  G        S    A  V++ D    R
Sbjct: 315 AAVLGILDPESGEL--VDAAGPWTEWAATLTVSGTRAVGVAASPRT-AYEVVELDTVTGR 371

Query: 385 LLVEDSNLQAP------------TW-SPSGRSL 404
                +    P            T+ +P GR +
Sbjct: 372 ARTIGARHTDPVDPAYYPEPQIRTFTAPDGREI 404



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 40/256 (15%), Positives = 74/256 (28%), Gaps = 43/256 (16%)

Query: 184 VVSGIIKNSLCVMDRDGA-----------NIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
             +   + +L     DGA             R    S       PR  P    +   T+ 
Sbjct: 42  RPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPR--PAGGPLLVFTHF 99

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS-----SNGKRAL-----ISVQK--DE 280
            +  L  +  D      P+ +    ++    R++                  + +   D 
Sbjct: 100 GDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDV 159

Query: 281 AMDIYSVDLQSNAT------ERLTNTLF-INISASYSPDSSQIVF-ESDREGKE------ 326
              + +V L  +A         L++           SPD  Q V+   D           
Sbjct: 160 RRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTEL 219

Query: 327 QLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +   +  +G  +D + +    E +     W+P G LI  T  +G  + +  +        
Sbjct: 220 KTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTG-WWNLHRVDPATGAAT 278

Query: 385 LLVEDSNLQA-PTWSP 399
            L       A P W+P
Sbjct: 279 QLCRREEEFAGPLWTP 294



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 64/207 (30%), Gaps = 34/207 (16%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYS-----PDSSQIVFESDR 322
           G   + +   D+ +  +  D    A  R LT    +     ++     P+  ++   ++ 
Sbjct: 91  GPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEE 150

Query: 323 ---EGKEQLYVM----------QSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTK- 365
              EG   +              ++ S  + +S D       P  SP G     +A+   
Sbjct: 151 FTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHP 210

Query: 366 ---FSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKL 418
              + G +     + +DG            +       W+P G  ++ +  + G     L
Sbjct: 211 RMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIV-ATDRTG--WWNL 267

Query: 419 YSID-LNGRNETLINTPAYASDPQWVG 444
           + +D   G    L       + P W  
Sbjct: 268 HRVDPATGAATQLCRREEEFAGPLWTP 294


>gi|83775355|dbj|BAE65477.1| unnamed protein product [Aspergillus oryzae]
          Length = 353

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 67/190 (35%), Gaps = 17/190 (8%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           E I    L D       + +     M+    FS +    L S   D  + ++  D +S  
Sbjct: 87  ESITGRKLRDKSWSAQLQTLKGHSGMVNTVVFSPD-SEILASGSGDGTIQLW--DAKSGK 143

Query: 294 TERLTNT-LFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
             ++ ++ L    +  +SPDS  +V  S DR     +++      +Q +IS+      ++
Sbjct: 144 QLQIFDSCLGWVNTMVFSPDSEVLVLSSLDRT----IWLWDIKSREQLQISKGYLDYTYN 199

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRK 409
             +S   +++A     G    I +      +    ++          +S   + L     
Sbjct: 200 LAFSLDSEILALGSGDGT---IQLWDTKSREPLQTLDSYLDWVNTMAFSLDSKILALGSD 256

Query: 410 KDGDTGSKLY 419
              D   +L+
Sbjct: 257 ---DKTVQLW 263



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 86/245 (35%), Gaps = 36/245 (14%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    +LWD K  KQ+                      I+ S  G    + + ++F
Sbjct: 126 ASGSGDGTIQLWDAKSGKQL---------------------QIFDSCLG----WVNTMVF 160

Query: 180 VSESVVS--GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
             +S V     +  ++ + D        ++       +   FS + + +A  + D     
Sbjct: 161 SPDSEVLVLSSLDRTIWLWDIKSREQLQISKGYLDYTYNLAFSLDSEILALGSGDG---- 216

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + L DT+     + + ++   +    FS + K   +    D+ + ++    +    + L
Sbjct: 217 TIQLWDTKSREPLQTLDSYLDWVNTMAFSLDSKILAL-GSDDKTVQLWCTKSR-KQLQIL 274

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              L    + ++SPDS  +   S   G + + +  +    Q +I +          +SP 
Sbjct: 275 EGHLARVNTVAFSPDSKILASGS---GDKTVRLWCTKSGKQLQILEGHLDWVRAVTFSPD 331

Query: 358 GDLIA 362
           G+++A
Sbjct: 332 GEILA 336



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 6/135 (4%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    ++ + D           S    +    FS + + +A  + D      V L  T+ 
Sbjct: 212 GSGDGTIQLWDTKSREPLQTLDSYLDWVNTMAFSLDSKILALGSDDK----TVQLWCTKS 267

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +  + +    + +    FS +  + L S   D+ + ++         + L   L    +
Sbjct: 268 RKQLQILEGHLARVNTVAFSPD-SKILASGSGDKTVRLW-CTKSGKQLQILEGHLDWVRA 325

Query: 307 ASYSPDSSQIVFESD 321
            ++SPD   +   SD
Sbjct: 326 VTFSPDGEILASGSD 340


>gi|296445639|ref|ZP_06887594.1| Oligopeptidase B [Methylosinus trichosporium OB3b]
 gi|296256884|gb|EFH03956.1| Oligopeptidase B [Methylosinus trichosporium OB3b]
          Length = 706

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 52/150 (34%), Gaps = 13/150 (8%)

Query: 304 NISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVW-------- 354
           +    + PD     FE  REG E  LY     G  ++ I  D +    +  +        
Sbjct: 97  DSEPPW-PDGPHAYFERFREGGEHTLYCRAPRGGGEEHILFDGDEEAGEAHFFDIGEIDH 155

Query: 355 SPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP    +A++        ++I        ++R  V   +  +  WS    S  + R  + 
Sbjct: 156 SPDHAQLAWSVDDKGSEYYSIRTRAIADGKDRPDVVTHSDGSMVWSADSTSFYYVRVDEN 215

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
              ++++  D+ G +           DP W
Sbjct: 216 HRTAQVFRHDV-GADPASDALIVEERDPAW 244


>gi|195999006|ref|XP_002109371.1| conserved hypothetical protein [Trichoplax adhaerens]
 gi|190587495|gb|EDV27537.1| conserved hypothetical protein [Trichoplax adhaerens]
          Length = 336

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 72/208 (34%), Gaps = 15/208 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++       + +   +FS +   VA ++ D      + + +    +  K I   +  I
Sbjct: 24  YTLQCTLTGHSKAVSSVKFSADGDWVASSSADG----TIRIWNAYDGKHEKLIQGHKMGI 79

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +S + K    +   D+ + I+  D  +    + L          ++ P S+ IV  
Sbjct: 80  SDVAWSPDSKLLA-TASNDKTLKIW--DFATGKCLKTLKGHTNYVFCCNFHPQSNLIVSG 136

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI    + G    I      
Sbjct: 137 SF---DENVRIWDVKSGKCTKNLSAHSDPVSAVHFNRDGTLIVSGSYDG-LCRIW-DTAS 191

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLI 405
           G   + +++D+N  +    +SP+G+ ++
Sbjct: 192 GQCLKTIIDDNNPPVSFVKFSPNGKYIL 219



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 72/188 (38%), Gaps = 12/188 (6%)

Query: 184 VVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           V S     ++ + +  DG + + +   +  I     +SP+ + +A A+ D      + + 
Sbjct: 49  VASSSADGTIRIWNAYDGKHEKLIQGHKMGISDV-AWSPDSKLLATASNDK----TLKIW 103

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTL 301
           D    +  K +    + +    F       ++S   DE + I+  D++S   T+ L+   
Sbjct: 104 DFATGKCLKTLKGHTNYVFCCNFHPQ-SNLIVSGSFDENVRIW--DVKSGKCTKNLSAHS 160

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +  ++ D + IV  S  +G  +++   ++G   K I  D         +SP G  I
Sbjct: 161 DPVSAVHFNRDGTLIVSGSY-DGLCRIWDT-ASGQCLKTIIDDNNPPVSFVKFSPNGKYI 218

Query: 362 AFTKFSGE 369
                   
Sbjct: 219 LAATLDNT 226



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 41/127 (32%), Gaps = 11/127 (8%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT       S  +S D   +   S  +G   + +  +     +++ Q  +    D  WSP
Sbjct: 30  LTGHSKAVSSVKFSADGDWVA-SSSADGT--IRIWNAYDGKHEKLIQGHKMGISDVAWSP 86

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
              L+A          + +      +  + L    + +    + P    ++       D 
Sbjct: 87  DSKLLATASNDKT---LKIWDFATGKCLKTLKGHTNYVFCCNFHPQSNLIV---SGSFDE 140

Query: 415 GSKLYSI 421
             +++ +
Sbjct: 141 NVRIWDV 147



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 70/201 (34%), Gaps = 33/201 (16%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                   R+WDVK  K                 AH  SD +        G         
Sbjct: 135 SGSFDENVRIWDVKSGKCTKNLS-----------AH--SDPVSAVHFNRDGTL------- 174

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +VSG       + D   G  ++ +    +  +   +FSPN + +  AT D+     +
Sbjct: 175 ---IVSGSYDGLCRIWDTASGQCLKTIIDDNNPPVSFVKFSPNGKYILAATLDN----TL 227

Query: 240 YLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TER 296
            L D    +  K     ++        FS  G + ++S  +D  + I+  +LQS    ++
Sbjct: 228 KLWDHSKGKCLKTYRGHKNENFCIFASFSVTGGKWIVSGSEDNMIYIW--NLQSKEIVQK 285

Query: 297 LTNTLFINISASYSPDSSQIV 317
           L+    I +S +  P  + I 
Sbjct: 286 LSGHTDIVLSCACHPKENIIA 306


>gi|156382726|ref|XP_001632703.1| predicted protein [Nematostella vectensis]
 gi|156219763|gb|EDO40640.1| predicted protein [Nematostella vectensis]
          Length = 771

 Score = 57.7 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 72/170 (42%), Gaps = 19/170 (11%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
           + + +R  R  K +   R  +L+ R+S +G  A+++V +D  + I+S   +S      L 
Sbjct: 89  FHLISRNGRVEKSVEAHRGAVLSGRWSYDG-SAMVTVGEDGQVKIWS---RSGMLRSTLM 144

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            T     S ++SPDS  I++ S     +QL +     + +    +  E       W+P  
Sbjct: 145 QTGTPVYSVAWSPDSDHILYTS----GKQLVIKPLQAAAKPIQWKAHEGIVLKIDWNPIN 200

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSL 404
           +LI      GE     V    G   R+L   +  + P    +W+P G  L
Sbjct: 201 NLIL---SGGEDCKYKVWDSYG---RVLYSSAPHEYPITSVSWAPDGELL 244



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 4/83 (4%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
             + +       + +       +S  +S D S +V     +G+ +++   S     +   
Sbjct: 88  KFHLISRNGRVEKSVEAHRGAVLSGRWSYDGSAMV-TVGEDGQVKIW---SRSGMLRSTL 143

Query: 343 QDKEASYFDPVWSPQGDLIAFTK 365
                  +   WSP  D I +T 
Sbjct: 144 MQTGTPVYSVAWSPDSDHILYTS 166



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +GK  L  +  NG  +K + +    +     WS  G  +      GE   + +  + G  
Sbjct: 86  DGKFHL--ISRNGRVEKSV-EAHRGAVLSGRWSYDGSAMVTV---GEDGQVKIWSRSGML 139

Query: 383 ERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
              L++    + +  WSP    ++++  K 
Sbjct: 140 RSTLMQTGTPVYSVAWSPDSDHILYTSGKQ 169



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 65/207 (31%), Gaps = 18/207 (8%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            G ++     +      G +K    +  R G  +R         ++   +SP+   + Y 
Sbjct: 111 SGRWSYDGSAMVTVGEDGQVK----IWSRSGM-LRSTLMQTGTPVYSVAWSPDSDHILYT 165

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +       ++ +   +    P +      ++L   ++      ++S  +D    ++  D 
Sbjct: 166 S-----GKQLVIKPLQAAAKPIQWKAHEGIVLKIDWNPI-NNLILSGGEDCKYKVW--DS 217

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                       +   S S++PD   +       G      +         + +    S 
Sbjct: 218 YGRVLYSSAPHEYPITSVSWAPDGELL-----GVGSFNTLRLCDRTGWSYALEKPNTGSI 272

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           F+  WS  G  +A    +G+     V+
Sbjct: 273 FNIAWSNDGTQLAGACGNGQVIFAHVI 299


>gi|226226476|ref|YP_002760582.1| hypothetical protein GAU_1070 [Gemmatimonas aurantiaca T-27]
 gi|226089667|dbj|BAH38112.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 870

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 72/213 (33%), Gaps = 14/213 (6%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 + +++    R         +    P +S +G R       D+A  +Y  D  + 
Sbjct: 112 MRSNAGLEILEWETGRKIPVALPAGARTTQPVWSPDGTRIAFLALFDDATQLYVADAATG 171

Query: 293 ATERLTNTLFIN---ISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKE-- 346
               ++    +     + ++S D   +V     + +  +            R+++  +  
Sbjct: 172 KATPVSGRNVLATTVTTPAWSADGQSLVVVLTPDARAAEPKEPALAAGPMVRLNESNKLK 231

Query: 347 -ASYFDPVWSP-QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             +Y D V +P + DL+A+   +G    + V+       R +     ++A   SP G+  
Sbjct: 232 TRTYADLVMTPYEKDLLAY-HITG---QLAVINAKTRAARKIGAPGMIRALDASPDGKY- 286

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            F         S +  +   G  + +++     
Sbjct: 287 -FRVTYVEKPFSYVLPVSSFGTRDVIVDGTGAV 318



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 76/229 (33%), Gaps = 24/229 (10%)

Query: 147 SPASWRKIAHTISDDI-----YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
           SP + +  A T+SD +             G F        E  ++      L +++ +  
Sbjct: 67  SPGNRKYFARTVSDGLPSLKNVGKAHHNLGGFQIDQAGNRERGITMRSNAGLEILEWETG 126

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSM 259
               +         +P +SP+  ++A+     +D  ++Y+ D    +A    G     + 
Sbjct: 127 RKIPVALPAGARTTQPVWSPDGTRIAFLAL-FDDATQLYVADAATGKATPVSGRNVLATT 185

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATERL-------TNTLFINISASYSP 311
           +  P +S++G+  ++ +  D          L +    RL       T T    +   Y  
Sbjct: 186 VTTPAWSADGQSLVVVLTPDARAAEPKEPALAAGPMVRLNESNKLKTRTYADLVMTPYEK 245

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           D   + +        QL V+ +     ++I             SP G  
Sbjct: 246 D--LLAYHI----TGQLAVINAKTRAARKI--GAPGMIRALDASPDGKY 286



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 25/86 (29%), Gaps = 6/86 (6%)

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            T  S     I   +        L   +    P WSP G  + F      D  ++LY  D
Sbjct: 110 ITMRSNAGLEILEWETGRKIPVALPAGARTTQPVWSPDGTRIAFLAL--FDDATQLYVAD 167

Query: 423 LNGRNETLINT----PAYASDPQWVG 444
                 T ++         + P W  
Sbjct: 168 AATGKATPVSGRNVLATTVTTPAWSA 193


>gi|168704495|ref|ZP_02736772.1| Dipeptidyl aminopeptidase [Gemmata obscuriglobus UQM 2246]
          Length = 750

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 79/241 (32%), Gaps = 35/241 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--S 275
           R+SP+ + VAY   D   +    ++D      P                   K      +
Sbjct: 212 RWSPDGKSVAYWQLDTRGVKAFTMIDNTTAVYPVL-----------------KTFAYPKT 254

Query: 276 VQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFES-DR-EGKEQL 328
            +++ A  +         T+ L     T T F      ++ +++++V +  +R +    +
Sbjct: 255 GERNSACRVGVAPAAGGPTKWLDVPGDTRTDFYIPRMEWAGNATELVVQRVNRLQNAVDV 314

Query: 329 YVMQSNGSDQKRISQDKEASYFDPV-----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            +  +     + +  +++ ++ D       W  +G    +         + +  +DG   
Sbjct: 315 LLADARTGQVRALLTERDGAWVDVHDDAGEWVEKGAAFTWVSERDGWRHLYLASRDGKSV 374

Query: 384 RLLVEDSNLQAPTWSPSGR--SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           R +               +  S+ F    +  T   LY   L+G    +  TPA    P 
Sbjct: 375 RKVTSGEFDVIRVLHIDEKAGSVYFLASPENPTQHYLYKCALDGTGAPVRGTPAD--QPG 432

Query: 442 W 442
           W
Sbjct: 433 W 433



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 30/101 (29%), Gaps = 23/101 (22%)

Query: 325 KEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +   +  + +     ++  D K ++      SP G  + + + +     I      G   
Sbjct: 126 RGDYWTFRRSTGKLAKLGGDAKPSTLMFAKMSPDGTRVGYVRDN----NIYAEPAAGGAA 181

Query: 384 RLLVEDSNLQA------------------PTWSPSGRSLIF 406
             L  D   Q                     WSP G+S+ +
Sbjct: 182 TPLTADGTEQVINGTFDWVYEEEFYCRDGWRWSPDGKSVAY 222


>gi|332877818|ref|ZP_08445556.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684113|gb|EGJ56972.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 680

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 63/182 (34%), Gaps = 29/182 (15%)

Query: 274 ISVQKDEAMDIYSVDLQSN--ATERL---TNTLFINISASYSPDSSQIVFES-----DRE 323
           I+  K   + I   D +    + E++    N+ +   + ++SPD   + F       +  
Sbjct: 195 ITGIKSGDIFISRKDDKGKWQSPEQVESEINSEYDEGACAFSPDGKTMYFTRCTHDPEYP 254

Query: 324 GKEQLYVMQSNGSDQK-----RISQDKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGV 375
              Q+Y      +         I++D  +S+  P  SP G  + F            I  
Sbjct: 255 RYAQIYTSDRTDASWGAPKLLEITKDTLSSFAHPTVSPDGRWLYFVSDMPGGLGGLDIWR 314

Query: 376 MKKD----GSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKD-GDTGSKLYSI--DLNG 425
           ++      G  + L   +    N   P++ P+G  L FS     G  G  L+    D  G
Sbjct: 315 IEIGEHGLGGVDNLGEPINTPGNEMFPSFRPNGD-LYFSSDGHVGMGGLDLFKAEQDSTG 373

Query: 426 RN 427
             
Sbjct: 374 TW 375



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 39/122 (31%), Gaps = 19/122 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---------SMILAPRFSSN 268
            FSP+ + + +     +     Y      DR     G  +         S    P  S +
Sbjct: 234 AFSPDGKTMYFTRCTHDPEYPRYAQIYTSDRTDASWGAPKLLEITKDTLSSFAHPTVSPD 293

Query: 269 GKRALISVQKD---EAMDIYSVDLQS---NATERL---TNTLFINISASYSPDSSQIVFE 319
           G+              +DI+ +++        + L    NT    +  S+ P+   + F 
Sbjct: 294 GRWLYFVSDMPGGLGGLDIWRIEIGEHGLGGVDNLGEPINTPGNEMFPSFRPNGD-LYFS 352

Query: 320 SD 321
           SD
Sbjct: 353 SD 354



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 20/118 (16%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGVMKKDG---SQERLL--VED--SN 391
           + E       +SP G  + FT+ +          I    +        +LL   +D  S+
Sbjct: 225 NSEYDEGACAFSPDGKTMYFTRCTHDPEYPRYAQIYTSDRTDASWGAPKLLEITKDTLSS 284

Query: 392 LQAPTWSPSGRSLIFSRKKDGD-TGSKLYSIDLN----GRNETL---INTPAYASDPQ 441
              PT SP GR L F     G   G  ++ I++     G  + L   INTP     P 
Sbjct: 285 FAHPTVSPDGRWLYFVSDMPGGLGGLDIWRIEIGEHGLGGVDNLGEPINTPGNEMFPS 342



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 68/222 (30%), Gaps = 39/222 (17%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISV-----QKDE 280
                 DI      D    ++P+++    N      A  FS +GK    +      +   
Sbjct: 196 TGIKSGDIFISRKDDKGKWQSPEQVESEINSEYDEGACAFSPDGKTMYFTRCTHDPEYPR 255

Query: 281 AMDIYS---VDLQSNATERL--T-NTLFINISASYSPDSSQIVFESDREGKEQ---LYVM 331
              IY+    D    A + L  T +TL      + SPD   + F SD  G      ++ +
Sbjct: 256 YAQIYTSDRTDASWGAPKLLEITKDTLSSFAHPTVSPDGRWLYFVSDMPGGLGGLDIWRI 315

Query: 332 QSNGSDQKRISQDKE-----ASYFDPVWSPQGDLIAFTKFSG----EKFAIGVMKKDGSQ 382
           +        +    E      +   P + P GDL  +    G        +   ++D + 
Sbjct: 316 EIGEHGLGGVDNLGEPINTPGNEMFPSFRPNGDL--YFSSDGHVGMGGLDLFKAEQDSTG 373

Query: 383 ERLL-------VEDSNLQAPTWSPSG--RSLIFSRKKDGDTG 415
              +           +  A T+   G      FS  +    G
Sbjct: 374 TWTVENLKYPMNSQGDDFAMTF--DGLHNRGFFSTNRGDARG 413



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/236 (12%), Positives = 68/236 (28%), Gaps = 30/236 (12%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRY-------LTPSRDQILFEPRFSPNQQKV 226
           + + ++ +             +   D  +  +       +T         P  SP+ + +
Sbjct: 238 DGKTMYFTRCTHDPEYPRYAQIYTSDRTDASWGAPKLLEITKDTLSSFAHPTVSPDGRWL 297

Query: 227 AYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRSMILAPRFSSNGKRALISVQKD 279
            + +     +  + +    I               N     + P F  NG     S    
Sbjct: 298 YFVSDMPGGLGGLDIWRIEIGEHGLGGVDNLGEPINTPGNEMFPSFRPNGD-LYFSSDGH 356

Query: 280 ---EAMDIYSVDLQSN------ATERLTNTLFINISASYSPDS-SQIVFESDREGKEQLY 329
                +D++  +  S         +   N+   + + ++  D      F S   G  + +
Sbjct: 357 VGMGGLDLFKAEQDSTGTWTVENLKYPMNSQGDDFAMTF--DGLHNRGFFSTNRGDARGW 414

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
               +    + +   K   Y    +  P+G L+      G    + V K DGS  +
Sbjct: 415 DHIMSFECPEVLLTVKGWVYEKDGYELPEG-LVYMVGNDGTNLKLSV-KGDGSFTQ 468


>gi|145351018|ref|XP_001419885.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580118|gb|ABO98178.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 215

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 20/183 (10%)

Query: 186 SGIIKNSLCVMD-RDGANIRYL--------TPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
            G    S+ V D RDG   + L        TP   +      +SP+ +++A    D    
Sbjct: 25  GGGTSQSVRVHDARDGERKQTLELPATTAETPKNGRFAQSVAYSPDGKRIACGAMDG--- 81

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-E 295
             V + D +  +    +    + +    FS +GK    +   D    +Y  D  + +  E
Sbjct: 82  -TVAVFDVKTGKCAHTLAGHVAPVRDVTFSPDGKTL-YTASDDGYAHVY--DAHNKSLIE 137

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L+      +S + SPD + +V  S       + +         +   D   + +   +S
Sbjct: 138 SLSGHKSWVLSLTASPDGTALVTGSS---DATIKLWDLKTRSCAQTMTDHSDAVWCVRFS 194

Query: 356 PQG 358
           P G
Sbjct: 195 PDG 197



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 59/150 (39%), Gaps = 10/150 (6%)

Query: 167 TGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           T + G F   + +  +   +  G +  ++ V D       +        + +  FSP+ +
Sbjct: 55  TPKNGRFAQSVAYSPDGKRIACGAMDGTVAVFDVKTGKCAHTLAGHVAPVRDVTFSPDGK 114

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +    Y   D    ++ D       + +   +S +L+   S +G  AL++   D  + +
Sbjct: 115 TL----YTASDDGYAHVYDAHNKSLIESLSGHKSWVLSLTASPDGT-ALVTGSSDATIKL 169

Query: 285 YSVDLQSNA-TERLTNTLFINISASYSPDS 313
           +  DL++ +  + +T+         +SPD 
Sbjct: 170 W--DLKTRSCAQTMTDHSDAVWCVRFSPDG 197


>gi|123459148|ref|XP_001316604.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121899315|gb|EAY04381.1| hypothetical protein TVAG_350560 [Trichomonas vaginalis G3]
          Length = 306

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 85/222 (38%), Gaps = 23/222 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                R+  +F+  + P+   +A +  D +  L+++                R+   A +
Sbjct: 4   STIDEREGFIFDVCWHPSGNYIAVSGADGK--LKIFEQKENNFVEIVCKQRERAARRA-Q 60

Query: 265 FSSNGKRALISVQKDEAMDIYSVD--LQS--NATERLTNTLFINISASYSPDSSQIVFES 320
           FS +G + +++   DE   +YS D  L    +    L+       +A +SP +  IV  +
Sbjct: 61  FSPDGTKIVVAGF-DEHAIVYSFDPKLDGVLSEEATLSGQDAEIKTARWSPKADLIV-TA 118

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            R+  + ++V  +   D   +  +  A   D ++SP G  I    F  EK  +   K++ 
Sbjct: 119 SRD--KSVWVWDTEEYDFIAVHSEHTADVKDAMFSPDGKFIVSVSFD-EKVKVWEAKEEL 175

Query: 381 SQERLLV-EDSNLQAPTWSP----------SGRSLIFSRKKD 411
              +        + +  ++P           G+ +++   K 
Sbjct: 176 GSLQTFSHHQGTVWSLAFNPNNGNFITLGEDGKIILYKLDKG 217



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 93/240 (38%), Gaps = 27/240 (11%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL- 261
           +  +   R++     +FSP+  K+  A +D+  I  VY  D ++D               
Sbjct: 45  VEIVCKQRERAARRAQFSPDGTKIVVAGFDEHAI--VYSFDPKLDGVLSEEATLSGQDAE 102

Query: 262 --APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
               R+S      +++  +D+++ ++  +         +        A +SPD   IV  
Sbjct: 103 IKTARWSPKAD-LIVTASRDKSVWVWDTEEYDFIAVH-SEHTADVKDAMFSPDGKFIVSV 160

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKFAIGVMKK 378
           S  + K +++  +      +  S   + + +   ++P  G+ I      GE   I + K 
Sbjct: 161 SF-DEKVKVWEAKEELGSLQTFSH-HQGTVWSLAFNPNNGNFITL----GEDGKIILYKL 214

Query: 379 DGSQERLLVE---DSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSI--DLNGRNETLI 431
           D    ++  E     +L++    +   G+  +      G + +K++ +  DL+  N T+ 
Sbjct: 215 DKGSYQIAAELQLQGDLESLYTAYYLDGQWFV------GGSQTKIFVVAEDLSKINRTIP 268


>gi|260591822|ref|ZP_05857280.1| 6-phosphogluconolactonase [Prevotella veroralis F0319]
 gi|260536106|gb|EEX18723.1| 6-phosphogluconolactonase [Prevotella veroralis F0319]
          Length = 362

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 65/191 (34%), Gaps = 19/191 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALIS 275
           F+P+   +    +  + IL  Y    +       I         PR   FS NGK A + 
Sbjct: 173 FAPDG-YILSTDFSGDRILSFYYDKNKKKLEDHGIAAHLKAGSGPRHLTFSPNGKYAYLI 231

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISA------SYSPDSSQIVFESDREGKEQLY 329
            +    + +Y+   +    + +   +  +  A        SPD +  V+ S R   + + 
Sbjct: 232 SELSGKVTVYTY--KEGKLKEIQTLVADDAHAQGGADIHVSPDGN-FVYASTRLKGDGIT 288

Query: 330 VMQSNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + NG+    ++   + S      +   +P G  +        K  +    K+    + 
Sbjct: 289 IFRVNGNGT--LTWVGKQSTGKHPRNFAITPNGKFLLVACRDANKIQVFSRNKNTGLLKN 346

Query: 386 LVEDSNLQAPT 396
             +D  L  P 
Sbjct: 347 TNQDIYLSHPV 357


>gi|219851158|ref|YP_002465590.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Methanosphaerula palustris E1-9c]
 gi|219545417|gb|ACL15867.1| periplasmic component of the Tol biopolymer transport system-like
           protein [Methanosphaerula palustris E1-9c]
          Length = 171

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 50/133 (37%), Gaps = 9/133 (6%)

Query: 301 LFINISASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              +   +Y       +V+E DR    Q+++     +  + +S     + F P  S  GD
Sbjct: 39  SSADSEPNYPTISGQYVVWEEDRGVDAQIWLYNLTTNSSRPLSP-HLGNQFAPAIS--GD 95

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            + +       + I +       E  +  + +    P  S  G +++++  ++G     +
Sbjct: 96  RVVWQDKRNGNWDIYLYNITTGVEAPVCTDPAKQVRPRIS--GDAIVWTDYRNG--NPDI 151

Query: 419 YSIDLNGRNETLI 431
           Y  DL  + E  +
Sbjct: 152 YRYDLGTQTEQPV 164



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 8/135 (5%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S D     P  S   Q V +   +D  +     +      + + +        AP  S
Sbjct: 38  LSSADSEPNYPTIS--GQYVVW--EEDRGVDAQIWLYNLTTNSSRPLSPHLGNQFAPAIS 93

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             G R +   +++   DIY  ++ +     +       +    S     IV+   R G  
Sbjct: 94  --GDRVVWQDKRNGNWDIYLYNITTGVEAPVCTDPAKQVRPRIS--GDAIVWTDYRNGNP 149

Query: 327 QLYVMQSNGSDQKRI 341
            +Y        ++ +
Sbjct: 150 DIYRYDLGTQTEQPV 164


>gi|111223132|ref|YP_713926.1| WD-40 repeat-containing protein [Frankia alni ACN14a]
 gi|111150664|emb|CAJ62365.1| Putative WD-40 repeat protein [Frankia alni ACN14a]
          Length = 688

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 66/207 (31%), Gaps = 12/207 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR---IGNFRSMILA 262
                   L +  FSP    +A       D   V L D      P+R   +   RS + A
Sbjct: 462 TLTGHRGYLHDLGFSPGGTLLA----TAGDDRAVLLWDLAEPGVPRRAAILAGHRSAVRA 517

Query: 263 PRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFES 320
             FS +G     +  +D  + ++ +      +AT  L+       + ++SPD   +    
Sbjct: 518 VAFSPDGTLLA-TGAEDRTVTLWDLADPTHPSATVTLSGARGAVFTVAFSPDGDLLAVAG 576

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKK 378
                    V             D   +     +SP G L+A      +     I   ++
Sbjct: 577 KDRTVRVYSVADPTTETVLAEIADHRRAVHAVAFSPDGTLLATASADRTATVRDITDPER 636

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLI 405
            G   RL      +Q   ++P  R L 
Sbjct: 637 PGPGHRLPAHAGPVQDVAFAPDSRLLA 663



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 72/235 (30%), Gaps = 14/235 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A A  D    +   + D         +   R  +    FS  G   L++  
Sbjct: 429 TFSPDGRILA-AAGDAGTTVLWQVADPSRPVPLMTLTGHRGYLHDLGFSPGGT--LLATA 485

Query: 278 KDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D+   +     +     R   L        + ++SPD + +      +    L+ +   
Sbjct: 486 GDDRAVLLWDLAEPGVPRRAAILAGHRSAVRAVAFSPDGTLLA-TGAEDRTVTLWDLADP 544

Query: 335 GSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL- 392
                 ++      + F   +SP GDL+A            V       E +L E ++  
Sbjct: 545 THPSATVTLSGARGAVFTVAFSPDGDLLAVAGKDRTVRVYSVADPTT--ETVLAEIADHR 602

Query: 393 ---QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               A  +SP G  L  +      T   +   +  G    L        D  +  
Sbjct: 603 RAVHAVAFSPDGTLLATASADRTATVRDITDPERPGPGHRLPAHAGPVQDVAFAP 657



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 54/174 (31%), Gaps = 15/174 (8%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSS-------NGKRALISVQKDEAMDIYSVDLQSNATE 295
           D    R    +   R   ++  FS         G    + + +    D   +        
Sbjct: 359 DLTAARRLAVLPEERGHPMSVSFSPTAALVATGGTDTTVRLWQAAFPDPPRLVAAVGYGR 418

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVW 354
           R+       +  ++SPD   +    D  G   L+ +         ++         D  +
Sbjct: 419 RINQEWARAV--TFSPDGRILAAAGD-AGTTVLWQVADPSRPVPLMTLTGHRGYLHDLGF 475

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLI 405
           SP G L+A T        +  + + G   R   L    S ++A  +SP G  L 
Sbjct: 476 SPGGTLLA-TAGDDRAVLLWDLAEPGVPRRAAILAGHRSAVRAVAFSPDGTLLA 528


>gi|111220795|ref|YP_711589.1| hypothetical protein FRAAL1339 [Frankia alni ACN14a]
 gi|111148327|emb|CAJ59999.1| hypothetical protein FRAAL1339 [Frankia alni ACN14a]
          Length = 1350

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 72/205 (35%), Gaps = 26/205 (12%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALI 274
             F P+ Q +A          RV L D    R P  I  F   +      RFS +G+  ++
Sbjct: 1058 AFRPDGQLLA-----VGTAKRVCLYDITDPRRPSMISTFAGPVGGVFTLRFSPDGRTLVL 1112

Query: 275  SVQKDEAMDIYSVDLQS------NATERL---TNTLFINISASYSPDSSQIVFESDREGK 325
                      +S +LQ+          RL   T          +S D   +V  +DR   
Sbjct: 1113 GGLGAPPASSFSTELQTWDVRDPRHPARLAAVTAHRDNVRDIKFSQDGRIMVSVADRS-- 1170

Query: 326  EQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             +L+ ++       + +  D         +SP G  +A     G   A      D S+  
Sbjct: 1171 VRLWDVRDPRRIVPQATLPDFPGEALRAAFSPDGRTLAVG--GGGPHATLWNVADPSRPA 1228

Query: 385  LLVED----SNLQAPTWSPSGRSLI 405
            L+       S +   T+SP GR+L+
Sbjct: 1229 LITSLSGHVSQVNTVTFSPDGRTLV 1253



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 64/215 (29%), Gaps = 31/215 (14%)

Query: 111  LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
            LV G +          E + WDV+D +        +        AH   D++      + 
Sbjct: 1110 LVLGGLGAPPASSFSTELQTWDVRDPRHPARLAAVT--------AHR--DNVRDIKFSQD 1159

Query: 171  GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            G     +   S  +        +          +   P          FSP+ + +A   
Sbjct: 1160 GRIMVSVADRSVRLWDVRDPRRIV--------PQATLPDFPGEALRAAFSPDGRTLAV-- 1209

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSNGKRALISVQKDEAMDIYSV 287
                      L +      P  I +    +       FS +G+  + +   D ++ ++ V
Sbjct: 1210 --GGGGPHATLWNVADPSRPALITSLSGHVSQVNTVTFSPDGRTLV-TGSLDNSVRVWDV 1266

Query: 288  D--LQSNATERLTNTLFINIS---ASYSPDSSQIV 317
                     ERL+ +   +       +S D S ++
Sbjct: 1267 QRLAHPKLVERLSRSGGTDTGIGTIDFSRDGSTLI 1301



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 55/208 (26%), Gaps = 21/208 (10%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            P  +     VAY   D  +     L         P R    R+ + A  +S NGK    
Sbjct: 624 NPAIAAQLSLVAYRKADTPEARGSVLSSFNGGSGVPTRYLFHRNAVGAVTYSPNGKLIA- 682

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------EGKEQL 328
           +   D A  I+        +  L            +     + F  D        G    
Sbjct: 683 TGSDDWATAIWDA-ADPRRSTPLAVLPGPRDGGH-TRAVKSVAFSRDSTLLATGSGDRTA 740

Query: 329 YVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-- 383
            +   +   + R+     +     +   +SP  D +A   +        V          
Sbjct: 741 KIWDVSTPSRPRLLATLPEATGDVYGLAFSPAADRLAVGGYGNSARIYDVSDPARPTLQG 800

Query: 384 ------RLLVEDSNLQAPTWSPSGRSLI 405
                 R  +    + A  +SP G  L 
Sbjct: 801 ALLINNREPLHRGPIDALAFSPDGTFLA 828



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 60/197 (30%), Gaps = 23/197 (11%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +FS + + +         +  V   D R       + +F    L   FS +G+   +   
Sbjct: 1155 KFSQDGRIMVSVADRSVRLWDV--RDPRRIVPQATLPDFPGEALRAAFSPDGRTLAV--- 1209

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQS 333
                      ++   +   L  +L  ++S     ++SPD   +V  S       + V   
Sbjct: 1210 GGGGPHATLWNVADPSRPALITSLSGHVSQVNTVTFSPDGRTLVTGSL---DNSVRVWDV 1266

Query: 334  NGSDQKRI------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                  ++      S   +       +S  G  +  T FS +   +  +      +R+  
Sbjct: 1267 QRLAHPKLVERLSRSGGTDTGIGTIDFSRDGSTLIGTVFS-QPATLWDLDVKRVAQRVCT 1325

Query: 388  EDS----NLQAPTWSPS 400
            +        +   + P 
Sbjct: 1326 QAGVGITRAEWARFLPD 1342



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 56/173 (32%), Gaps = 22/173 (12%)

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            DT     P    +  ++     FS +G+    S   D A+ ++ +   +     L     
Sbjct: 951  DTSDGERPLTFLDEGAVTWTVAFSPDGRHLA-SGSADGALRVWEIPGPA-----LIGRHG 1004

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGD 359
               S+  +P +  +V  S R  +        + +    I+    D         + P G 
Sbjct: 1005 EQQSSEVNPRTGDVVTVSYRAAELWNIADPYHPASLSAITDDLADDGDVTNGAAFRPDGQ 1064

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLI 405
            L+A     G    + +     +  R     S    P        +SP GR+L+
Sbjct: 1065 LLAV----GTAKRVCLYDI--TDPRRPSMISTFAGPVGGVFTLRFSPDGRTLV 1111


>gi|302346497|ref|YP_003814795.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           melaninogenica ATCC 25845]
 gi|302150702|gb|ADK96963.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           melaninogenica ATCC 25845]
          Length = 736

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/309 (12%), Positives = 94/309 (30%), Gaps = 72/309 (23%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDED 235
             + L V D  G   +  T     I++                +SP   ++A+   D   
Sbjct: 159 KDHQLYVTDAKGTEHQLTTDGSRDIVYGQSVHRDEFGINGGLYWSPKGNRLAFYRMDQSM 218

Query: 236 ILRVYLMDT------------------------------RIDRAPKRIGNFRSMILAP-- 263
           +    L+D                               ++      +   +++ L    
Sbjct: 219 VADYPLVDVPELDWKPAKGESRAAKVDLIKYPMVGETSHKVTVGVYDLTTGKTVYLQAGD 278

Query: 264 ---------RFSSNGKRAL-ISVQKDEAM-DIYSVDLQSN----ATERLTNTLFINISA- 307
                     +S + K      + +D+    + S D  +        R T+  +  +   
Sbjct: 279 PTDRYFTNITWSPDEKMVYMFELNRDQNDCRLVSYDATTGAKLKELYRETDAKY--VEPC 336

Query: 308 ---SYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               + P + ++ + +S ++G   LY+   +G   K+I+  K        ++ +   I +
Sbjct: 337 HPIQFLPWNDNEFILQSQKDGYNHLYLFNKDGRQLKQITSGKWVVLEVLGFNSKQKSIVY 396

Query: 364 TKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY-S 420
                +  +    ++     +  LL        P  S  G +++        +  + Y  
Sbjct: 397 VSNECNPIQRNAWLVNIASGKRTLLDNGRGYHYPKLSEDGNAVM--DNYSEPSVPRKYEI 454

Query: 421 IDLNGRNET 429
           I LNG+ + 
Sbjct: 455 ISLNGKPQR 463



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 84/232 (36%), Gaps = 17/232 (7%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT----PSRDQILFEPRFSPNQ 223
             KG+  +  + + +  + G   + + V   D    + +        D+      +SP++
Sbjct: 234 PAKGESRAAKVDLIKYPMVGETSHKVTVGVYDLTTGKTVYLQAGDPTDRYFTNITWSPDE 293

Query: 224 QKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL----AP-RFSS-NGKRALISV 276
           + V  +    D++  R+   D       K +             P +F   N    ++  
Sbjct: 294 KMVYMFELNRDQNDCRLVSYDATTGAKLKELYRETDAKYVEPCHPIQFLPWNDNEFILQS 353

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           QKD    +Y  +      +++T+  ++ +    ++     IV+ S+     Q      N 
Sbjct: 354 QKDGYNHLYLFNKDGRQLKQITSGKWVVLEVLGFNSKQKSIVYVSNECNPIQRNAWLVNI 413

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIA--FTKFS-GEKFAIGVMKKDGSQER 384
           +  KR   D    Y  P  S  G+ +   +++ S   K+ I  +  +G  +R
Sbjct: 414 ASGKRTLLDNGRGYHYPKLSEDGNAVMDNYSEPSVPRKYEI--ISLNGKPQR 463


>gi|258574717|ref|XP_002541540.1| WD-repeat protein 5 [Uncinocarpus reesii 1704]
 gi|237901806|gb|EEP76207.1| WD-repeat protein 5 [Uncinocarpus reesii 1704]
          Length = 450

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 74/209 (35%), Gaps = 16/209 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              R +     + +   +FSP+   +A  + D      +   ++   +         + I
Sbjct: 165 YKERLVLRGHQRGVSMVQFSPDGSMIASCSAD----ATIRTWNSSTGKLIHTFEGHLAGI 220

Query: 261 LAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
               +S +G     S   D+++ ++   + ++ +   L +  ++  S ++SP  + +V  
Sbjct: 221 STLCWSPDGTFIA-SRSDDKSIRLWERFNRKTTSNTFLGHHNYV-YSIAFSPKGNMLVSG 278

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E +++     +   R                 G LI      G    I +    
Sbjct: 279 SY---DEAVFLWDVRSARIMRSLPAHSDPVAGIDVIRDGTLIVSCASDG---LIRIWDSA 332

Query: 380 GSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
             Q  R LV + N  +    +SP+G+ ++
Sbjct: 333 TGQCLRTLVHEDNPPVTGVKFSPNGKYVL 361



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 47/133 (35%), Gaps = 12/133 (9%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD S I   S       +    S+        +   A      WSP G  IA ++   
Sbjct: 183 FSPDGSMIASCS---ADATIRTWNSSTGKLIHTFEGHLAGISTLCWSPDGTFIA-SRSDD 238

Query: 369 EKFAIG-VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           +   +     +  +    L   + + +  +SP G  L+      G     ++  D+  R+
Sbjct: 239 KSIRLWERFNRKTTSNTFLGHHNYVYSIAFSPKGNMLV-----SGSYDEAVFLWDV--RS 291

Query: 428 ETLINTPAYASDP 440
             ++ +    SDP
Sbjct: 292 ARIMRSLPAHSDP 304



 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 62/177 (35%), Gaps = 7/177 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++   +     + +        +    +SP+   +A  +  D+  +R++    R   +  
Sbjct: 198 TIRTWNSSTGKLIHTFEGHLAGISTLCWSPDGTFIA--SRSDDKSIRLWERFNRKTTSNT 255

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +G+  + + +  FS  G   + S   DEA+ ++ V   +     L              
Sbjct: 256 FLGHH-NYVYSIAFSPKGNMLV-SGSYDEAVFLWDV-RSARIMRSLPAHSDPVAGIDVIR 312

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           D + IV  +  +G  +++   + G   + +  +         +SP G  +      G
Sbjct: 313 DGTLIVSCAS-DGLIRIWD-SATGQCLRTLVHEDNPPVTGVKFSPNGKYVLAWSLDG 367


>gi|87199430|ref|YP_496687.1| dipeptidyl-peptidase IV [Novosphingobium aromaticivorans DSM 12444]
 gi|87135111|gb|ABD25853.1| dipeptidyl-peptidase IV, Serine peptidase, MEROPS family S09B
           [Novosphingobium aromaticivorans DSM 12444]
          Length = 754

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/251 (16%), Positives = 86/251 (34%), Gaps = 64/251 (25%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           ++ R  +RIG+ + ++    +S++ K  L+ V  D  + +  +D    +  ++  T    
Sbjct: 114 KMQRERQRIGDLKGIVSY-EWSADSKSVLVPV--DGDLLLAGLD---GSVRKVEGTKGGE 167

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---------------- 348
           ++    P    I F  DR    +L+     G+    I+ ++  +                
Sbjct: 168 LTPKLGPKGEHIAFVRDR----RLWAGPVTGTAAVAITPEEANADVHWGEAEFVAQEEMN 223

Query: 349 -YFDPVWSPQGDLIAFTKFS------------------------------GEKFAIGVMK 377
            +    WSP    IA  +F                                 + ++ V+ 
Sbjct: 224 RFNGFWWSPDESRIAVERFDESMVGVVTRAAIGAEGTKTFDQRYPAAGTPNAEVSLYVIG 283

Query: 378 KDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLIN 432
            DGS    +   +N         W+P G++L   R     T   +  +D + G++  L +
Sbjct: 284 PDGSNRVQVDLGANKDIYLARVDWAPDGKTLYVQRMNREQTVLDMLKVDPVTGKSSVLFS 343

Query: 433 TPAYASDPQWV 443
             A A    W+
Sbjct: 344 EKAAAKH--WI 352



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 54/348 (15%), Positives = 106/348 (30%), Gaps = 66/348 (18%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE--- 216
           D   + + G KG   +  L      ++ +    L      G     +TP           
Sbjct: 154 DGSVRKVEGTKGGELTPKLGPKGEHIAFVRDRRLWAGPVTGTAAVAITPEEANADVHWGE 213

Query: 217 --------------PRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKR 252
                           +SP++ ++A   +D+  +  V             D R   A   
Sbjct: 214 AEFVAQEEMNRFNGFWWSPDESRIAVERFDESMVGVVTRAAIGAEGTKTFDQRYPAAGTP 273

Query: 253 IGNFRSMILAP---------------------RFSSNGKRALISVQKDEAM--DIYSVDL 289
                  ++ P                      ++ +GK   +     E    D+  VD 
Sbjct: 274 NAEVSLYVIGPDGSNRVQVDLGANKDIYLARVDWAPDGKTLYVQRMNREQTVLDMLKVDP 333

Query: 290 QSNATERLTNTLF-----INISASYS--PDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +  +  L +        I++S SY    D S +++ S R+G   LY  ++      +++
Sbjct: 334 VTGKSSVLFSEKAAAKHWIDLSDSYRFLADGS-LIWWSQRDGFGHLYRFKN--GKWSQLT 390

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSP 399
           + +           +G  +       +  A  V   D     +   L E   +   +   
Sbjct: 391 KGEWVVTGLVGVDEKGGKLYLAGTKDDVLAPQVYAMDLKAPGKLTRLTELGWVNGASMDK 450

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVGFM 446
           SG++L+ +R  D       Y  D  G+N   I       S P +  ++
Sbjct: 451 SGQTLMITRSSDAQPAQS-YIADTAGKNLAWIEENKVAGSHP-YAPYL 496


>gi|326799025|ref|YP_004316844.1| 6-phosphogluconolactonase [Sphingobacterium sp. 21]
 gi|326549789|gb|ADZ78174.1| 6-phosphogluconolactonase [Sphingobacterium sp. 21]
          Length = 376

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/324 (12%), Positives = 93/324 (28%), Gaps = 29/324 (8%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           ++ G     GK +    +  +D          +  SS  S+  ++   +D  Y     E 
Sbjct: 29  VLIGTYTNTGKSKGIYVYS-FDPSSGSLTYKNEVASSDPSFLALS---ADKKYLYAVNEL 84

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
                 +         G +      +    +    +   +D  +    +S       +  
Sbjct: 85  NTGEGAVSAFKYHPTDGKLVLLNTQLTHGDSPCHVIVDQKDNHVVVSNYS-GGSLTVFGV 143

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             D  +     +       P +    +  + +   S +G+  L+     + +++Y  D  
Sbjct: 144 QPDGSLTEKVQLIKHEGSGPNKSRQEKPHVHSATLSPDGRFLLVQDLGTDRINVYGYDAL 203

Query: 291 SNATERLTNTLFINISA-------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-- 341
           +      T       S        +++ D   +    +   K  + V   +      I  
Sbjct: 204 NKNAPLSTEAKVAKASPGSGPRHITFAKDGRYVYLVQEM--KAAVTVYAYSDGQLTAIQE 261

Query: 342 ------SQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQE----RLLVED 389
                 S   +    D   SP G  + +    G     AI  + K+  +        VE 
Sbjct: 262 ISMLPPSYKGDVGAADIHISPDGKFL-YASNRGEANDMAIYAINKEDGKLSYVGNQSVEG 320

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGD 413
              +    SP G+ L+ + +   D
Sbjct: 321 KGPRNFAISPDGKHLLVANQYTDD 344



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 42/292 (14%), Positives = 90/292 (30%), Gaps = 43/292 (14%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISD--DIYQSITGEKGDFNSRILFVSESVVSGI 188
           +   D K ++     +   S     H I D  D +  ++   G   +    V      G 
Sbjct: 96  YHPTDGKLVLLNTQLTHGDSP---CHVIVDQKDNHVVVSNYSGGSLT----VFGVQPDGS 148

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           +   + ++  +G+        +  +      SP+ + +        D + VY  D     
Sbjct: 149 LTEKVQLIKHEGSGPNKSRQEKPHVHSA-TLSPDGRFLLVQDLGT-DRINVYGYDALNKN 206

Query: 249 APKRIGNFRSMILAP-------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           AP      +    +P        F+ +G+   +  +   A+ +Y+         +LT   
Sbjct: 207 AP-LSTEAKVAKASPGSGPRHITFAKDGRYVYLVQEMKAAVTVYAYS-DG----QLTAIQ 260

Query: 302 FINISA------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            I++                SPD  + ++ S+R     + +   N  D K +S     S 
Sbjct: 261 EISMLPPSYKGDVGAADIHISPDG-KFLYASNRGEANDMAIYAINKEDGK-LSYVGNQSV 318

Query: 350 -----FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                 +   SP G  +       +   +    +   + +       + AP 
Sbjct: 319 EGKGPRNFAISPDGKHLLVANQYTDDVIVFARDEQTGRLKNTGNRIEIGAPV 370


>gi|307298626|ref|ZP_07578429.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915791|gb|EFN46175.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 597

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 92/243 (37%), Gaps = 15/243 (6%)

Query: 158 ISDDIYQSITG----EKGDFNS---RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            SD+  + +T     + G   S   ++ + S  +     +  L   +        +  ++
Sbjct: 89  FSDEEIRDLTPFEKTKSGFHMSVGDKVYYYSNRI--DKSRFDLYRFNEGDLTSELVFENK 146

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRF-SSN 268
           D     P  S +++ +A       +   +YL +  ++   K +   +S     P F S +
Sbjct: 147 DLFELGP-ISSDERFIALRKLRTANDSDIYLYN-FVNGDIKLLSPHQSEANFKPLFFSID 204

Query: 269 GKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
             +         E M ++ ++++S  +E + +  +  I+   S D    V   +R+G  +
Sbjct: 205 SLKLYYVSDSAGEFMTLWEMNIESRVSEEILDLEWDIIAGRMSEDGENAVLVLNRDGFSE 264

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLL 386
           L+V+++  +  K          +D  +S  G L+ +    +     I  +  +  + + L
Sbjct: 265 LHVIETKSNSLKMPPIKTSGVVYDQCFSKDGQLLYYLCDSATSSPNIFSINLETKKTKKL 324

Query: 387 VED 389
            + 
Sbjct: 325 TDS 327



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/210 (12%), Positives = 67/210 (31%), Gaps = 48/210 (22%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--------NTLFINISASYSPD--- 312
             S++ ++ L S  K    +++ +D +     + T        + +F + S  ++ D   
Sbjct: 21  AVSADSRKILYSSDKTGNYNVFELDQEKGRHRQTTSLDENALVSFIFEDGSFIFAMDKGG 80

Query: 313 -------------------------------SSQIVFESDREGKEQLYVMQSNGSDQK-R 340
                                            ++ + S+R  K +  + + N  D    
Sbjct: 81  DELHHLYLFSDEEIRDLTPFEKTKSGFHMSVGDKVYYYSNRIDKSRFDLYRFNEGDLTSE 140

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLV---EDSNLQAPT 396
           +  + +  +     S     IA  K  +     I +        +LL     ++N +   
Sbjct: 141 LVFENKDLFELGPISSDERFIALRKLRTANDSDIYLYNFVNGDIKLLSPHQSEANFKPLF 200

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +S     L +     G+  + L+ +++  R
Sbjct: 201 FSIDSLKLYYVSDSAGEFMT-LWEMNIESR 229



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 43/123 (34%), Gaps = 12/123 (9%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-AF 363
            S + S DS +I++ SD+ G   ++ +       ++ +   E +    ++   G  I A 
Sbjct: 18  ASFAVSADSRKILYSSDKTGNYNVFELDQEKGRHRQTTSLDENALVSFIFE-DGSFIFAM 76

Query: 364 TKFSGEKFAIGVMK----KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            K   E   + +      +D +         ++        G  + +   +   +   LY
Sbjct: 77  DKGGDELHHLYLFSDEEIRDLTPFEKTKSGFHMSV------GDKVYYYSNRIDKSRFDLY 130

Query: 420 SID 422
             +
Sbjct: 131 RFN 133


>gi|254425439|ref|ZP_05039157.1| hypothetical protein S7335_5605 [Synechococcus sp. PCC 7335]
 gi|196192928|gb|EDX87892.1| hypothetical protein S7335_5605 [Synechococcus sp. PCC 7335]
          Length = 1250

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/281 (14%), Positives = 101/281 (35%), Gaps = 38/281 (13%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRD 211
            + H++ ++ +  +       + ++L       +G I + + +    DG  +  LT   +
Sbjct: 592 DLTHSVFNETFSQVLSVAFSPDGKLL------ATGDINHEIQIWQSADGKPLLSLTMD-E 644

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             ++   FSPN + +A +         V+L   +     +   ++   +    FS +GK 
Sbjct: 645 GWVWSVAFSPNGKLIAGSANGA-----VHLWHVQNGELVQCFDDYSDRVFCVSFSPDGKL 699

Query: 272 ALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSP-------------DSSQIV 317
              +  +D  + ++  DL++     +L        S ++ P             D +  +
Sbjct: 700 LA-TGSEDRQVKVW--DLKTGHLLHQLKGHTDEVRSVAFLPTQQPSSTLASASYDGTVRL 756

Query: 318 FESDRE------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           + + +       G  +L   + +GS+     +          +SP G L+  +  +    
Sbjct: 757 WHAIKGECLAVLGGSELSDSELSGSNVSDSDRSDSNRLSSVAFSPDG-LVLASGGASGYL 815

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +  +K      +LL     +++  +SP G ++        
Sbjct: 816 HLWHVKTK-KAWQLLDAQQPIRSIAFSPDGNTVAVGANDGN 855



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/255 (12%), Positives = 85/255 (33%), Gaps = 14/255 (5%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +   ++        +V S     ++ + D      +Y+       +     +P+     
Sbjct: 954  HKSWIWSVSFSPTRPTVASSSEDQTIRIWDIQSQQQKYVLTGHGDAVLSLLHAPDG---- 1009

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              +     +       +      + + +    +     S +G + L+S  +D+ + +++ 
Sbjct: 1010 --SLWSGSLDGTLKQWSEEGICLQTLNSHDGGVWTVALSLDG-QLLLSGSQDQTIKLWN- 1065

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKE 346
             +  +  + L        S + SPD   ++     +G  +++    NG  + ++      
Sbjct: 1066 PVSGSVIDTLNGHQSWIRSVAMSPDCKTLL-SGGADGILKIWQRDRNGKYRCQQTYAAHG 1124

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                       G   A T  +     +  +K    QE     +  +++ T+SP G +L  
Sbjct: 1125 GPILSIAIHKNGRQ-ATTSSTDSTIKLWELKTGICQEIQQAHNRWIKSLTYSPDGSTLAS 1183

Query: 407  SRKKDGDTGSKLYSI 421
              +   D   KL+ +
Sbjct: 1184 CSQ---DATIKLWQV 1195



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 73/205 (35%), Gaps = 36/205 (17%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   ++   +        +      + + P +IG     ++           L+ +Q D 
Sbjct: 513 PIADRLLALSSPANWAQIIQQWLDELRQIPSQIGYAGGNLIN---------LLVQMQVDL 563

Query: 281 AMD------IYSVDLQSNATER-------LTNTLFINI-----SASYSPDSSQIVFESDR 322
           +        I+S  L+     R       LT+++F        S ++SPD   +    D 
Sbjct: 564 SDWDFSRLPIWSAYLKGVDLHRVSFVASDLTHSVFNETFSQVLSVAFSPDGKLLA-TGDI 622

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             + Q++   ++G     ++ D E   +   +SP G LIA         A+ +      +
Sbjct: 623 NHEIQIW-QSADGKPLLSLTMD-EGWVWSVAFSPNGKLIA----GSANGAVHLWHVQNGE 676

Query: 383 ERLLVEDSNLQA--PTWSPSGRSLI 405
                +D + +    ++SP G+ L 
Sbjct: 677 LVQCFDDYSDRVFCVSFSPDGKLLA 701



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 82/271 (30%), Gaps = 39/271 (14%)

Query: 128  FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
             R+WD++ ++Q                     D +   +    G           S+ SG
Sbjct: 979  IRIWDIQSQQQKYVLTGHG-------------DAVLSLLHAPDG-----------SLWSG 1014

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +  +L     +G  ++ L  S D  ++    S + Q +   + D      + L +    
Sbjct: 1015 SLDGTLKQWSEEGICLQTL-NSHDGGVWTVALSLDGQLLLSGSQDQ----TIKLWNPVSG 1069

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINI 305
                 +   +S I +   S + K  L S   D  + I+  D       + T        +
Sbjct: 1070 SVIDTLNGHQSWIRSVAMSPDCKTLL-SGGADGILKIWQRDRNGKYRCQQTYAAHGGPIL 1128

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S +   +  Q    S       + + +      + I Q          +SP G  +A   
Sbjct: 1129 SIAIHKNGRQATTSST---DSTIKLWELKTGICQEIQQAHNRWIKSLTYSPDGSTLASCS 1185

Query: 366  FSGEKFAIGVMKKDGSQERL-LVEDSNLQAP 395
                   I + +   S   L L +   +  P
Sbjct: 1186 QDAT---IKLWQVASSPPWLMLTQTLRMPRP 1213



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 76/213 (35%), Gaps = 23/213 (10%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +      Q +    FSP+   VA    D      ++  + R   + + +    S I A  
Sbjct: 826  WQLLDAQQPIRSIAFSPDGNTVAVGANDG----NIWRWNYRTGESLQMLSGHTSWISAIT 881

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +S N  + L S  +D ++ I+  +L     +  +N ++   S +++   + +       G
Sbjct: 882  YSPN--QMLASGSEDRSVRIWRGNLCLRQLQGYSNGIW---SVAFNRQGTLLA-----SG 931

Query: 325  KE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             +   L +      +     +  ++  +   +SP    +A +        I +      Q
Sbjct: 932  NQDRDLRLWSVQTGELLSTLRGHKSWIWSVSFSPTRPTVASSSEDQT---IRIWDIQSQQ 988

Query: 383  ERLLVEDSNLQAPTW--SPSGRSLIFSRKKDGD 413
            ++ ++        +   +P G   ++S   DG 
Sbjct: 989  QKYVLTGHGDAVLSLLHAPDGS--LWSGSLDGT 1019


>gi|71278695|ref|YP_271435.1| hypothetical protein CPS_4796 [Colwellia psychrerythraea 34H]
 gi|71144435|gb|AAZ24908.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
          Length = 695

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 4/104 (3%)

Query: 264 RFSSNGKRALISVQKDEAMD---IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
             S  G   +  ++K  +     +Y  ++++    +LT       +  ++ D   + F S
Sbjct: 44  TLSPQGDVLVYGLKKGSSSKDNHLYKQNIKTGQITQLTEHEKAESNVVWADDGKSLYFLS 103

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            R G  Q++         K+IS D          S  G + A +
Sbjct: 104 SRNGSSQIWQQDLQDQTAKQIS-DFPVEVNGFKLSKNGQVFALS 146



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 55/148 (37%), Gaps = 8/148 (5%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATY----DDEDILRVYLMDTRIDRAPKRIGNF 256
            N++ +T   +     P +SPN + +AY        + D   + L D R  +      ++
Sbjct: 271 FNLKNITEKNNAWDSSPVYSPNGRYLAYKAMKIAGYEADKFTLQLRDNRTGKIRAVAADW 330

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              I +  F+ +     +  Q      I+S+  + +    ++N          S   + I
Sbjct: 331 DRSISSLAFAPDNNSVYVVAQDVGQKSIFSITPEFDEVRSISNVGSNGD---ISSHGNTI 387

Query: 317 VFESDREGKEQ-LYVMQSNGSDQKRISQ 343
            F        Q ++ + ++G D  +++ 
Sbjct: 388 YFTRHTLNSPQDIFSIDNHGDDLTQLTH 415



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 34/82 (41%), Gaps = 6/82 (7%)

Query: 355 SPQGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKK 410
           SPQGD++ +    G       +        Q   L E    ++   W+  G+SL F   +
Sbjct: 46  SPQGDVLVYGLKKGSSSKDNHLYKQNIKTGQITQLTEHEKAESNVVWADDGKSLYFLSSR 105

Query: 411 DGDTGSKLYSIDLNGRNETLIN 432
           +G   S+++  DL  +    I+
Sbjct: 106 NGS--SQIWQQDLQDQTAKQIS 125



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 69/257 (26%), Gaps = 66/257 (25%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           SP    + Y           +L    I      ++           ++ +GK       +
Sbjct: 46  SPQGDVLVYGLKKGSSSKDNHLYKQNIKTGQITQLTEHEKAESNVVWADDGKSLYFLSSR 105

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FESDRE------------- 323
           + +  I+  DLQ    +++++          S +       F                  
Sbjct: 106 NGSSQIWQQDLQDQTAKQISDFPVEVNGFKLSKNGQVFALSFTVKPGCETLTCTVEAKKA 165

Query: 324 -------------------------GKEQLYVMQSNGSDQKRISQD-------KEASYFD 351
                                     KE L++  ++ + Q + +QD         A    
Sbjct: 166 DEEKKYNIRAYDQLMVRHWDAWATEYKEHLFIAHADKNGQLKHAQDIMPNWVSDFAGISQ 225

Query: 352 PVWSPQGDLIAFT------------KFSGEKFAIGVMKKDGSQ----ERLLVEDSNLQ-- 393
               P    +AF+                  F I  +     Q     + + E +N    
Sbjct: 226 VSIHPDATSLAFSAKDSSSKAAAKDHAWSTNFDIFEVSLAKGQTAFNLKNITEKNNAWDS 285

Query: 394 APTWSPSGRSLIFSRKK 410
           +P +SP+GR L +   K
Sbjct: 286 SPVYSPNGRYLAYKAMK 302



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 25/137 (18%)

Query: 308 SYSPDSSQIVFE-----SDREGKEQLYVMQSN-----------GSDQKRISQDKEASYFD 351
           S  PD++ + F      S    K+  +    +             + K I++   A    
Sbjct: 227 SIHPDATSLAFSAKDSSSKAAAKDHAWSTNFDIFEVSLAKGQTAFNLKNITEKNNAWDSS 286

Query: 352 PVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSL 404
           PV+SP G  +A+       +  +KF + +      + R +  D +    +  ++P   S+
Sbjct: 287 PVYSPNGRYLAYKAMKIAGYEADKFTLQLRDNRTGKIRAVAADWDRSISSLAFAPDNNSV 346

Query: 405 IFSRKKDGDTGSKLYSI 421
               +  G     ++SI
Sbjct: 347 YVVAQDVGQK--SIFSI 361


>gi|21241575|ref|NP_641157.1| hypothetical protein XAC0805 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21106929|gb|AAM35693.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 844

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 72/219 (32%), Gaps = 15/219 (6%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQ--KDEAMD 283
            +A        +++L+        +  G    + LA   +S + +      +     A +
Sbjct: 110 TFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASGANE 169

Query: 284 IYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKR 340
           ++ VD+ +    RL   L   +N    + PD S ++ +    G+       +       +
Sbjct: 170 LWLVDVATGQARRLVAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPTRDATPTGPATQ 229

Query: 341 ISQDKEASYFDPVWSP----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +         P +      + D   F  ++  +  I  +     Q R +         +
Sbjct: 230 QTSAAAGVRSLPTYQDLLRSEADARVFEYYATGQPIIVTVA---GQVRPIATPGIYLNLS 286

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            SP GR ++   ++     S L  +D   R   +++   
Sbjct: 287 VSPDGRYIL--SERSERPFSYLVPVDNFARRIEVLDLQG 323



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 86/253 (33%), Gaps = 26/253 (10%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRF 219
           DI +    E      RI   + +       + L ++   DG+  +         L +  +
Sbjct: 90  DIAEVAQPELKLAGLRIHPKTFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSW 149

Query: 220 SPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQ 277
           SP+Q+ +A+   D       ++L+D    +A + +     S+    R+  +G   L+  Q
Sbjct: 150 SPDQRHLAFRREDAASGANELWLVDVATGQARRLVAGLNTSVNDDLRWLPDGSGLLLQQQ 209

Query: 278 KDEAMDIYSVDLQ-SNATERLTNTLFINIS-ASYSP----DSSQIVFESDREGKEQLYVM 331
                   + D   +    + T+      S  +Y      ++   VFE    G+  +  +
Sbjct: 210 VAGQGAPPTRDATPTGPATQQTSAAAGVRSLPTYQDLLRSEADARVFEYYATGQPIIVTV 269

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIGVMKKDG 380
                  + I+      Y +   SP G  I  ++ S   F            I V+   G
Sbjct: 270 A---GQVRPIAT--PGIYLNLSVSPDGRYIL-SERSERPFSYLVPVDNFARRIEVLDLQG 323

Query: 381 SQERLLVEDSNLQ 393
              R + +   ++
Sbjct: 324 KLVRQIAQLPLVE 336



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 12/133 (9%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFS--GE 369
           +S+  F S      +L+++      +++I+      S  D  WSP    +AF +      
Sbjct: 113 ASRFSFAS------KLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASG 166

Query: 370 KFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              + ++     Q R LV     S      W P G  L+  ++  G            G 
Sbjct: 167 ANELWLVDVATGQARRLVAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPTRDATPTGP 226

Query: 427 NETLINTPAYASD 439
                +  A    
Sbjct: 227 ATQQTSAAAGVRS 239



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 378 KDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            DGS+ ++  L    +L   +WSP  R L F R+      ++L+ +D+       +    
Sbjct: 128 ADGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASGANELWLVDVATGQARRLVAGL 187

Query: 436 YAS---DPQWVG 444
             S   D +W+ 
Sbjct: 188 NTSVNDDLRWLP 199


>gi|297203689|ref|ZP_06921086.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197711737|gb|EDY55771.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 340

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 54/173 (31%), Gaps = 16/173 (9%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F++R   V     +         + +DG        + D  ++   F+ + +  A     
Sbjct: 166 FSTRTAIVDTRTWAIDDNLETFRVIKDG----RTYHAADTNIWGVTFADDHRFYATLATG 221

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEAMDIYSV 287
                       R D   + +      +  P  S +G R            D    +Y +
Sbjct: 222 GR------TYLVRGDLTARTLTTLHRNVECPSLSPDGTRVAYKKRVKGASPDAPWRLYVL 275

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           +L +        +  I+  A ++ D   +V+    +    L+ + ++G    R
Sbjct: 276 NLSTMKETATAESRTIDDQALWA-DGDTLVYALPGDYGSDLWTVPADGGGTAR 327



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 73/240 (30%), Gaps = 42/240 (17%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I    R SP+   VA+  +   D        TR      R            ++ +   
Sbjct: 136 GIPTRARVSPSGHLVAWTVFVSGDSYAGTNFSTRTAIVDTR-----------TWAIDDNL 184

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
               V KD                   +    NI      D  +        G+  L   
Sbjct: 185 ETFRVIKDGRTY---------------HAADTNIWGVTFADDHRFYATLATGGRTYLVRG 229

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-----KFAIGVMKKDGSQERLL 386
                  + ++     +   P  SP G  +A+ K          + + V+     +E   
Sbjct: 230 DLT---ARTLTTLHR-NVECPSLSPDGTRVAYKKRVKGASPDAPWRLYVLNLSTMKETAT 285

Query: 387 VEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQWVG 444
            E   +     W+  G +L+++    GD GS L+++  + G     + T A A  P ++G
Sbjct: 286 AESRTIDDQALWA-DGDTLVYAL--PGDYGSDLWTVPADGGGTARRLMTSAVA--PAYLG 340



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 57/183 (31%), Gaps = 27/183 (14%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------ 326
            +    ++      +D       R      I   A  SP    + +     G        
Sbjct: 108 AVHGALEDTYRAVVLDAHLRERHRFPA-AGIPTRARVSPSGHLVAWTVFVSGDSYAGTNF 166

Query: 327 ---------QLYVMQSNGSDQKRISQDK-----EASYFDPVWSPQGDLIAFTKFSGEKFA 372
                    + + +  N    + I   +     + + +   ++      A     G  + 
Sbjct: 167 STRTAIVDTRTWAIDDNLETFRVIKDGRTYHAADTNIWGVTFADDHRFYATLATGGRTY- 225

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSIDLNGRNET 429
             +++ D +   L     N++ P+ SP G  + + ++  G   D   +LY ++L+   ET
Sbjct: 226 --LVRGDLTARTLTTLHRNVECPSLSPDGTRVAYKKRVKGASPDAPWRLYVLNLSTMKET 283

Query: 430 LIN 432
              
Sbjct: 284 ATA 286


>gi|149920986|ref|ZP_01909446.1| WD-40 repeat [Plesiocystis pacifica SIR-1]
 gi|149818118|gb|EDM77574.1| WD-40 repeat [Plesiocystis pacifica SIR-1]
          Length = 1238

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 59/167 (35%), Gaps = 8/167 (4%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +    + ++    FSP+ Q V   +      +  + ++T        I      + + 
Sbjct: 527 HAVFEGHEGLVHTLVFSPDAQTV--YSGGAGGKVMRWSVETGAADPETPIIQHEQSVTSL 584

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G   + S  +D ++ +++ D    ++  LT          + P  ++ V  +  +
Sbjct: 585 ALSPDGHTLV-SASEDRSVHLWT-DYAPTSSRELTRHGGGVNQVRFDPSGTR-VLTASED 641

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           G  ++  +    +  + ++ D  +      +SP G  +       + 
Sbjct: 642 GSARIVSVD---TSAETLTLDAGSPVNLATFSPDGRRVLTGSDDSKG 685



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/277 (11%), Positives = 79/277 (28%), Gaps = 35/277 (12%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G    S+ +   D   +        + L +       Q++   + D        L  + 
Sbjct: 842  TGSFDGSVRLWPLDRRPLSTALRGHSEALTDIAIDHVGQRLLTTSRDG----SARLWSSV 897

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 +++   +S I     S +G+   ++  ++    I   D +      L       +
Sbjct: 898  DGHQLRQLSASKSSINTSEISPDGRYVALAFVEEG---IQLWDTERWEQRVLAEHKTAVV 954

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              ++   S+Q+         ++  +        + + +    +     + P G  +A T 
Sbjct: 955  DLAFDSASAQL---GSASYDDRATIWNVADGSIRSVLRGHTGNVGCIDFEPGGQRVA-TA 1010

Query: 366  FSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKD---------- 411
                   I     + S   LL   +  + P      SP G +L  + +            
Sbjct: 1011 SDDATVRIW----NTSSGALLTTLNGHEGPIRDLARSPDGHTLATASQDGTARLWPDSNP 1066

Query: 412  ------GDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                      + ++ +  +   E ++          W
Sbjct: 1067 EHALVLAGHDASVWRVSFDATGERVLTASTDGHARVW 1103



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 10/138 (7%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             ++   A+        +Q +     SP+   +  A+ D      V+L       + + +
Sbjct: 561 WSVETGAADPETPIIQHEQSVTSLALSPDGHTLVSASEDR----SVHLWTDYAPTSSREL 616

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPD 312
                 +   RF  +G R L +  +D +  I SVD    + E LT      ++ A++SPD
Sbjct: 617 TRHGGGVNQVRFDPSGTRVL-TASEDGSARIVSVD---TSAETLTLDAGSPVNLATFSPD 672

Query: 313 SSQIVFESDREGKEQLYV 330
             +++  SD + K +++ 
Sbjct: 673 GRRVLTGSD-DSKGRVWT 689



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 56/155 (36%), Gaps = 13/155 (8%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYSP 311
               ++    FS + +  + S      +  +SV  ++ A      +        S + SP
Sbjct: 532 GHEGLVHTLVFSPDAQT-VYSGGAGGKVMRWSV--ETGAADPETPIIQHEQSVTSLALSP 588

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   +V  S+ +    L+      +  + +++          + P G  +      G   
Sbjct: 589 DGHTLVSASE-DRSVHLWT-DYAPTSSRELTRHG-GGVNQVRFDPSGTRVLTASEDGSA- 644

Query: 372 AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
              ++  D S E L ++  + +   T+SP GR ++
Sbjct: 645 --RIVSVDTSAETLTLDAGSPVNLATFSPDGRRVL 677



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 52/138 (37%), Gaps = 10/138 (7%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD+ Q V+     GK   + +++  +D +      E S      SP G  +  +    
Sbjct: 542 FSPDA-QTVYSGGAGGKVMRWSVETGAADPETPIIQHEQSVTSLALSPDGHTLV-SASED 599

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               +       S   L      +    + PSG  ++ + +   D  +++ S+D +    
Sbjct: 600 RSVHLWTDYAPTSSRELTRHGGGVNQVRFDPSGTRVLTASE---DGSARIVSVDTSAETL 656

Query: 429 TL-----INTPAYASDPQ 441
           TL     +N   ++ D +
Sbjct: 657 TLDAGSPVNLATFSPDGR 674


>gi|16331709|ref|NP_442437.1| hypothetical protein slr0825 [Synechocystis sp. PCC 6803]
 gi|1001263|dbj|BAA10507.1| slr0825 [Synechocystis sp. PCC 6803]
          Length = 637

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 56/383 (14%), Positives = 118/383 (30%), Gaps = 52/383 (13%)

Query: 96  SIPRFQDWNS-LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
            I  +  W S + A  L+ G +   G   ++           + +   +   +      +
Sbjct: 8   QIAPYGSWRSPITADALLAGSI---GLGAVQ--------NSGEDVFWLEARPAEKGRNVL 56

Query: 155 AHTISDDIYQSITGEKGDFNSRI-------LFVSESVV--SGIIKNSLCVMDRDGANIRY 205
            H   D   + +T    +  +R+         V+   V  S      + V    G   + 
Sbjct: 57  VHRQPDGTVRDVTPAPFNVRTRVHEYGGGAFLVTADGVYFSNFSDQQVYVQGV-GQEPQR 115

Query: 206 LTPSRDQILFEPRFS-PNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           LT   D    +     P Q+ +A       + ++        +  +     I        
Sbjct: 116 LTNRPDCRFADFVLDQPRQRLIAVGERHHSEAKEPENFLAAISLENGEVTTIATVHDFYS 175

Query: 262 APRFSSNGKRALISVQKD-----EAMDIYSVDLQS----NATERLTNTLFINI--SASYS 310
           +PR S +G++             +A  ++  D+      +  + +             +S
Sbjct: 176 SPRLSPDGQKLAWITWDHPHMPWDATQLWLADIDQAGNLSNLKIIAGQAGNESIHEPQWS 235

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP--------QGDLIA 362
           PD S + F  DR     LY       D        +A +  P W            D I 
Sbjct: 236 PDGS-LYFVGDRTDWWNLYRYHKGEVDNV---FPLDAEFAYPHWVFGLRSYTFVDTDTIL 291

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            T      + +G +K    Q  +L    +  + +    G++L F       T S + ++ 
Sbjct: 292 CTFTQDGAWQLGKLKPSRKQLSILGLPYSNYS-SLCSDGKTLWFIGS-GPTTSSAVVALA 349

Query: 423 LNGRNETLINTPAYAS-DPQWVG 444
           +  +   ++   +  + DP ++ 
Sbjct: 350 VEAQETEILKVASDFTLDPAYLA 372


>gi|87310431|ref|ZP_01092561.1| Peptidase C14, caspase catalytic subunit p20 [Blastopirellula
           marina DSM 3645]
 gi|87286930|gb|EAQ78834.1| Peptidase C14, caspase catalytic subunit p20 [Blastopirellula
           marina DSM 3645]
          Length = 610

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 67/163 (41%), Gaps = 15/163 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRID---RAPKRIGNFRSMILAPRFSSNGKRALI 274
           RFSP+ +K+A A++D      + L D R +   ++P  +      +L+  FS++ +  L 
Sbjct: 285 RFSPDSRKLATASFD----ATICLWDVRANDVAQSPVVLSGHDERVLSIDFSADSRWLLS 340

Query: 275 SVQ-KDEAMDIYSV-DLQSNATERLTNTLFINIS----ASYSPDSSQIVFESDREGKEQL 328
           + Q    +     + DLQ+     +T TL  +      A  SPDS    F S  +G  QL
Sbjct: 341 AAQAAPGSPSEILLWDLQAKGHPHVTQTLGQHFGRVHAAKLSPDSRW-AFTSSADGFVQL 399

Query: 329 YVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEK 370
           + +     D+  ++        D V +SP    +         
Sbjct: 400 WRLNPKSGDRLTVAMRARHGLTDRVFFSPDSSQLVTVSEGNNG 442



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/312 (14%), Positives = 98/312 (31%), Gaps = 29/312 (9%)

Query: 130 LWDVKD-RKQIIGKKFFSSPASWRK-IAHTISDDI--YQSITGEKG----DFNSRILFVS 181
           L D    + + IGK+   +    R+ ++  ++D+    +     +       +  I   +
Sbjct: 149 LVDSAQIKSRSIGKQLDQARLDARRDLSLRLADEATRLELSAPHRSLMLAAESVEIARAT 208

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +   +      L    +D A  +  +    + +    FS +            D  R  L
Sbjct: 209 KQHPASGAVQVLFDQLQDQA--QMQSSGHAETIRSIAFSADGA----MWASGGDDNRAIL 262

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTN 299
              +  RA   +    S +   RFS + ++   +   D  + ++ V       +   L+ 
Sbjct: 263 HAMQSQRAAIPLEAHWSRVSQVRFSPDSRKLA-TASFDATICLWDVRANDVAQSPVVLSG 321

Query: 300 TLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQD---KEASYFDPVW 354
                +S  +S DS  +    ++      ++ +          ++Q              
Sbjct: 322 HDERVLSIDFSADSRWLLSAAQAAPGSPSEILLWDLQAKGHPHVTQTLGQHFGRVHAAKL 381

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLI-FSRK 409
           SP     AFT  +     +  +       RL V             +SP    L+  S  
Sbjct: 382 SPDSRW-AFTSSADGFVQLWRLNPKSGD-RLTVAMRARHGLTDRVFFSPDSSQLVTVSEG 439

Query: 410 KDGDTGSKLYSI 421
            +G+   + +S+
Sbjct: 440 NNGECVVRRWSL 451


>gi|315049789|ref|XP_003174269.1| dipeptidyl-peptidase 5 [Arthroderma gypseum CBS 118893]
 gi|311342236|gb|EFR01439.1| dipeptidyl-peptidase 5 [Arthroderma gypseum CBS 118893]
          Length = 726

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 70/198 (35%), Gaps = 32/198 (16%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +G   + + +  F+ NG +       D  +      ++   +         +     SPD
Sbjct: 182 VGTQFNAVFSGAFTKNGGKWAF----DGKLKNLVQPVKYAESPYPPFGGSGDYD--LSPD 235

Query: 313 SSQIVFESDREGKEQ-------LYVMQSNGSDQ---------KRISQDKEASYFDPVWSP 356
              + F S      +       ++ +  +GS            R  Q  E +   PV+SP
Sbjct: 236 GKTVAFMSKAPELPKANLTTTYIFTVPHDGSRVAEPINKRGGPRTPQGIEGASSSPVFSP 295

Query: 357 QGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSR 408
            G  +A+ + +   +      I + +   ++    +  +  ++P    WS  GR+L  + 
Sbjct: 296 DGKRLAYLQMAINNYESDRRVIHIAEVGTNKPVQRIAANWDRSPEAIKWSSDGRTLYVTA 355

Query: 409 KKDGDTGSKLYSIDLNGR 426
           +       KLY++  + R
Sbjct: 356 EDH--ATGKLYTLPSDAR 371



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 74/206 (35%), Gaps = 16/206 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSR---------DQILFEPRFSPNQQKVAYATY----DDEDIL 237
             +  +  DG+ +      R         +     P FSP+ +++AY        + D  
Sbjct: 256 TYIFTVPHDGSRVAEPINKRGGPRTPQGIEGASSSPVFSPDGKRLAYLQMAINNYESDRR 315

Query: 238 RVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            +++ +   ++  +RI  N+     A ++SS+G+   ++ +      +Y++   +  + +
Sbjct: 316 VIHIAEVGTNKPVQRIAANWDRSPEAIKWSSDGRTLYVTAEDHATGKLYTLPSDARDSHK 375

Query: 297 --LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             +        S  +  +S  ++   +      LY + + G   +++    E        
Sbjct: 376 PAVVQADGSVGSFYFVGNSKSVLTFGNSLWSNALYQVATPGRRSRKVFYANEHDPELKGL 435

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDG 380
            P      +   +  K    ++K  G
Sbjct: 436 GPNDIEPLWVDGARTKVHSWIVKPTG 461



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 62/208 (29%), Gaps = 34/208 (16%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF-- 219
           IY S+     D      F   +V SG    +      DG     + P +      P F  
Sbjct: 169 IYDSLFVRHWDAYVGTQF--NAVFSGAFTKNGGKWAFDGKLKNLVQPVKYAESPYPPFGG 226

Query: 220 ------SPNQQKVAYAT---------------YDDEDILRVYLMDTRIDRAPKRIGNFRS 258
                 SP+ + VA+ +               +                  P+       
Sbjct: 227 SGDYDLSPDGKTVAFMSKAPELPKANLTTTYIFTVPHDGSRVAEPINKRGGPRTPQGIEG 286

Query: 259 MILAPRFSSNGKRALI---SVQK--DEAMDIYSVDLQSNATERLTNTLFINISAS---YS 310
              +P FS +GKR      ++     +   I+  ++ +N   +       + S     +S
Sbjct: 287 ASSSPVFSPDGKRLAYLQMAINNYESDRRVIHIAEVGTNKPVQRIAAN-WDRSPEAIKWS 345

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D   +   ++     +LY + S+  D 
Sbjct: 346 SDGRTLYVTAEDHATGKLYTLPSDARDS 373


>gi|258515033|ref|YP_003191255.1| hypothetical protein Dtox_1779 [Desulfotomaculum acetoxidans DSM
           771]
 gi|257778738|gb|ACV62632.1| hypothetical protein Dtox_1779 [Desulfotomaculum acetoxidans DSM
           771]
          Length = 464

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 79/229 (34%), Gaps = 46/229 (20%)

Query: 244 TRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                  + +  + S    L P  S +GK+    +    +  +  +D        L    
Sbjct: 119 LETVGDLQEVARYWSDKEDLQPAVSPDGKK----LLLTRSGLLLMLDQDGTQRVLL--QP 172

Query: 302 FIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--------- 349
            IN      S++ D ++I       G+ +  +  +  +    +SQ   + +         
Sbjct: 173 QINEKYTYPSWTSDGNKITLVKKINGQNEEIIQLAATALNSGVSQGSHSEWKNNLESFSR 232

Query: 350 ---------------FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                           +  WSP G+ +AF      + ++ ++     QE+ +        
Sbjct: 233 QKPELLYRGKAGEEISNLHWSPVGNNLAFIVRKENQDSVIILD----QEKKIHNRGEGSE 288

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            TWSP G +L+  RKKD    S+L  I  +G+  TL        +P W 
Sbjct: 289 LTWSPDGSALVVERKKD---TSQLLIIGPDGQEVTLTKGE----NPVWG 330



 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 76/230 (33%), Gaps = 58/230 (25%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           ++D+DG     L P  ++    P ++ +  K+      +     +  +      +    G
Sbjct: 159 MLDQDGTQRVLLQPQINEKYTYPSWTSDGNKITLVKKINGQNEEIIQLAATALNSGVSQG 218

Query: 255 NF--RSMILAP---------------------RFSSNGKRALISVQKDEAMDIYSVDLQS 291
           +       L                        +S  G      V+K+    +  +D   
Sbjct: 219 SHSEWKNNLESFSRQKPELLYRGKAGEEISNLHWSPVGNNLAFIVRKENQDSVIILD--- 275

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              +++ +        ++SPD S +V E  ++   QL ++  +G +   +++ +      
Sbjct: 276 -QEKKI-HNRGEGSELTWSPDGSALVVERKKD-TSQLLIIGPDGQEVT-LTKGEN----- 326

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           PVW  QG  + +T                SQER+L          + P G
Sbjct: 327 PVWGQQG-YLVYTDMK-------------SQERILT---------YMPDG 353


>gi|118397033|ref|XP_001030852.1| hypothetical protein TTHERM_01006600 [Tetrahymena thermophila]
 gi|89285168|gb|EAR83189.1| hypothetical protein TTHERM_01006600 [Tetrahymena thermophila SB210]
          Length = 2390

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 44/244 (18%), Positives = 87/244 (35%), Gaps = 25/244 (10%)

Query: 185  VSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V+G    S  + + + G  +  +       +    FSP+ + +A        I       
Sbjct: 2033 VTGSYDKSCKLWNLEKGFELIKMDEKHTSFIHSVAFSPDGKLLATTDSQIYKIWS----T 2088

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLF 302
             R      +I   R  I +  F+ +G   + +   D+   I+SV+       ++  N  F
Sbjct: 2089 ERGFELINKIQAHRDFINSLAFTPDGNYLV-TSSFDKTCKIWSVEKGFKYLHKIQVNNQF 2147

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDL 360
               S + SPDS  +   SD      + +      + + I+  +    F     +SP G  
Sbjct: 2148 --KSIAISPDSLFLATVSDI---NNIEIRNIQ-KNIQLITTIEGFVDFVQSLYFSPDGKY 2201

Query: 361  IAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            +A    +   + I      G  E    +    S++++ T+S   + +        D   K
Sbjct: 2202 LA--ASNDNTYRIF--DAKGKFELIHTIQAHSSDVKSVTFSNDSKYIATGSY---DKTCK 2254

Query: 418  LYSI 421
            ++SI
Sbjct: 2255 IWSI 2258



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 55/317 (17%), Positives = 112/317 (35%), Gaps = 51/317 (16%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      +            +WDV    Q++               H+I +   + I  
Sbjct: 1856 SVTFSADSKYLATGLFNGLCIIWDVDKGFQLL---------------HSI-NANEKQILS 1899

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                F+S+++  S   +  + K        DG  +          +    FSPN + +A 
Sbjct: 1900 VAFSFDSKLIATSSQAICKVWKIK------DGFQLIETLYGHVDNISSVAFSPNGKYLAT 1953

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + D +      + +           N  + + +  FS+N K    S+       I++V+
Sbjct: 1954 GSLDHK----FNIWNVEKGYDLIDTINAHNPVYSVVFSANSKYLASSLL--GGCKIWNVE 2007

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEA 347
                    +T+T  IN SA++S D+ Q+V  S     +   +     G +  ++ +   +
Sbjct: 2008 NGFQLLNIITST--IN-SAAFSQDAKQLVTGSY---DKSCKLWNLEKGFELIKMDEKHTS 2061

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQAPTWSPSGRSL 404
                  +SP G L+A T    + + I     +   E   ++      + +  ++P G  L
Sbjct: 2062 FIHSVAFSPDGKLLATT--DSQIYKIW--STERGFELINKIQAHRDFINSLAFTPDGNYL 2117

Query: 405  IFSRKKDGDTGSKLYSI 421
            + S     D   K++S+
Sbjct: 2118 VTSS---FDKTCKIWSV 2131



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 88/242 (36%), Gaps = 20/242 (8%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             N   L       +    FS + +++   +YD    L        + +  ++  +F   I
Sbjct: 2007 ENGFQLLNIITSTINSAAFSQDAKQLVTGSYDKSCKLWNLEKGFELIKMDEKHTSF---I 2063

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
             +  FS +GK  L++    +   I+S +       ++        S +++PD + +V  S
Sbjct: 2064 HSVAFSPDGK--LLATTDSQIYKIWSTERGFELINKIQAHRDFINSLAFTPDGNYLV-TS 2120

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              +   +++ ++       +I  + +  +     SP    +A          I +     
Sbjct: 2121 SFDKTCKIWSVEKGFKYLHKIQVNNQ--FKSIAISPDSLFLATVSDIN---NIEIRNIQK 2175

Query: 381  SQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            + + +   +  +       +SP G+ L        D   +++  D  G+ E +    A++
Sbjct: 2176 NIQLITTIEGFVDFVQSLYFSPDGKYLA----ASNDNTYRIF--DAKGKFELIHTIQAHS 2229

Query: 438  SD 439
            SD
Sbjct: 2230 SD 2231


>gi|332993281|gb|AEF03336.1| Dipeptidyl peptidase IV [Alteromonas sp. SN2]
          Length = 845

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 79/199 (39%), Gaps = 16/199 (8%)

Query: 245 RIDRAPKRIGNFRSMIL---APRFSSNGKRALISVQKDEAMDIY--SVDLQSNAT---ER 296
            ++R P+ I    S      +  +  +G++  + V+  +  D +  +VDL +       R
Sbjct: 377 DVNRLPRPITLLSSWNWQKPSISWHKDGEQVAVMVEAWDNKDRWIATVDLDNQRLVNQHR 436

Query: 297 LTNTLFINI---SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           L +  ++N    S  +  +S  + ++S+  G   LY  +  G   K ++Q    +  +P 
Sbjct: 437 LHDDAWVNYRFNSFGWFNNSETLYYQSEHSGYAHLYTQEP-GQAPKALTQGTFITD-NPT 494

Query: 354 WSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            S     + FT        F +  +K  G +   L + + L     SP   +L+ S  K 
Sbjct: 495 LSSDDMWMYFTANSKHPSIFEVYRVKATGGEVEALTDLNGLTEYELSPDNATLVLSHGKV 554

Query: 412 GDTGSKLYSIDLNGRNETL 430
                +LY   +N +   +
Sbjct: 555 SRP-PELYVKAVNSKEAAI 572



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 15/160 (9%), Positives = 52/160 (32%), Gaps = 13/160 (8%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                 +    +    + +A    D++ ++  + +        +                
Sbjct: 403 DGEQVAVMVEAWDNKDRWIATVDLDNQRLVNQHRLHDDAWVNYRFNSFGWFNNS------ 456

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE- 326
             +      +      +Y+ +    A + LT   FI  + + S D   + F ++ +    
Sbjct: 457 --ETLYYQSEHSGYAHLYTQEP-GQAPKALTQGTFITDNPTLSSDDMWMYFTANSKHPSI 513

Query: 327 -QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            ++Y +++ G + + ++     + ++   SP    +  + 
Sbjct: 514 FEVYRVKATGGEVEALTDLNGLTEYE--LSPDNATLVLSH 551



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 33/245 (13%), Positives = 79/245 (32%), Gaps = 23/245 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILA 262
           TPSRD     P +     ++A      +    + +   L    +    K + N+ S+   
Sbjct: 297 TPSRDDSDIMPHYIQEDSRIASKPVRRKVADAEPINHQLWLLDLASGEKSLLNYFSL--- 353

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFE 319
           P ++ +         ++      S D+       +T     N    S S+  D  Q+   
Sbjct: 354 PGYNDD--VLADVKAENAKAKGESYDVN-RLPRPITLLSSWNWQKPSISWHKDGEQVAVM 410

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDK-------EASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +    +  ++   +  +Q+ ++Q +          +    W    + + +         
Sbjct: 411 VEAWDNKDRWIATVDLDNQRLVNQHRLHDDAWVNYRFNSFGWFNNSETLYYQSEHSGYAH 470

Query: 373 IGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETL 430
           +   +  G   + L + + +   PT S     + F+      +  ++Y +   G   E L
Sbjct: 471 LYTQEP-GQAPKALTQGTFITDNPTLSSDDMWMYFTANSKHPSIFEVYRVKATGGEVEAL 529

Query: 431 INTPA 435
            +   
Sbjct: 530 TDLNG 534


>gi|219126866|ref|XP_002183669.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217404906|gb|EEC44851.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 551

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 7/144 (4%)

Query: 182 ESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    +L +   ++  +         Q +    FSP+ +  A A++D +    V 
Sbjct: 407 ERLVSGSDDFTLFLWHPQESKHAIKRLTGHQQAVNHIAFSPDGRYFASASFDKK----VK 462

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + +         +      +    +SS+ +  + S  KD    ++ +     A E L   
Sbjct: 463 IWNGFSGDFLTTLTGHVGAVYQVAWSSDSRYLV-SASKDSTAKLWEMPSGKRARETLPGH 521

Query: 301 LFINISASYSPDSSQIVFES-DRE 323
                +  +SP+ + +   S DR 
Sbjct: 522 ADEVYALDWSPNGASVATGSKDRT 545



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 51/158 (32%), Gaps = 10/158 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            F + G   L+S   D  + ++      +A +RLT         ++SPD       S   
Sbjct: 400 AFRAQGPERLVSGSDDFTLFLWHPQESKHAIKRLTGHQQAVNHIAFSPDGRYFASASF-- 457

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             +++ +      D          + +   WS     +           +  M   G + 
Sbjct: 458 -DKKVKIWNGFSGDFLTTLTGHVGAVYQVAWSSDSRYLVSASKDSTA-KLWEM-PSGKRA 514

Query: 384 RLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLY 419
           R  +     +     WSP+G S+    K   D   K++
Sbjct: 515 RETLPGHADEVYALDWSPNGASVATGSK---DRTIKIW 549



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/299 (14%), Positives = 83/299 (27%), Gaps = 53/299 (17%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D   +  +Y        +    ++PN ++   A   D++ + +    T+
Sbjct: 202 SGGGDTTVRFWDVHTSTPKYTCKQHKNHVLCVAWAPNGKRFVSA---DKNGVWIVWDPTK 258

Query: 246 IDRAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +   K +   R  I +  +          R   +  KD  + I++V  Q+     L+  
Sbjct: 259 GEAVGKAVKAHRQWITSLAWEPMHLNAACDRLA-TSSKDGTIKIWNVRTQAQNLT-LSGH 316

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--- 357
                S  +S D    ++ + R+    + V   +     R              S     
Sbjct: 317 TDSVESIKWSGDG--FLYSASRD--RTIKVWNVDRGILVRTLTGHGHRINTLALSSDYVL 372

Query: 358 -----------------------GDLIAFTKFSGEK-------FAIGVMKKDGSQE---R 384
                                      AF     E+       F + +     S+    R
Sbjct: 373 RTGPFDHRGTKFASEEAAQQAAQEKYEAFRAQGPERLVSGSDDFTLFLWHPQESKHAIKR 432

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           L      +    +SP GR   +      D   K+++        TL           W 
Sbjct: 433 LTGHQQAVNHIAFSPDGR---YFASASFDKKVKIWNGFSGDFLTTLTGHVGAVYQVAWS 488


>gi|320040512|gb|EFW22445.1| sepB protein [Coccidioides posadasii str. Silveira]
          Length = 847

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 70/202 (34%), Gaps = 18/202 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S +   +A A+    D L + +++       K + +    +    F  +G+   +S  
Sbjct: 104 AISKDGDWLAVAS----DELAIKIVNIEDMTQVKYLRDQTKGVKHVTFDPSGRYVTVSCS 159

Query: 278 KDEAMDIYS--------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            D  + +YS        +        RL N       A + PD +   F +    K+ + 
Sbjct: 160 -DGIIYVYSFTETEPSLIQKIDGVIRRLENEDEGTSQAVWHPDGT--AFAAVEATKDIVV 216

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   + + QKR S    A      WSP G L+A    +G    I + +          + 
Sbjct: 217 VSSRDWTKQKRFSNGHTADITALAWSPNGALLA---SAGADRQIVLWETRTQSILRKYDF 273

Query: 390 SNLQAPTWSPSGRSLIFSRKKD 411
           +N+    W P    + F+    
Sbjct: 274 ANVINLAWHPVNNEVSFTTSDG 295


>gi|307209889|gb|EFN86668.1| WD repeat-containing protein 61 [Harpegnathos saltator]
          Length = 327

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 74/201 (36%), Gaps = 24/201 (11%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            T   +D ++V++      +   ++      +++   SS+G +            +   D
Sbjct: 53  VTGSVDDSVKVWVPQDDTLKLKHKLTGHSLGVVSIAVSSDGSKCA---SSSLDSSLRLWD 109

Query: 289 LQSNATERLTNTLFINISAS------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           L+S    +L+N   I +         +SPD  + V      GK  LY ++ +G  ++ + 
Sbjct: 110 LESGD--KLSN---IEVGPVDIWTVVFSPD-DKFVVSGSHAGKIHLYGVE-SGKQEQTLD 162

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPS 400
                      +SP G  IA     G    I +      +    +E   +  ++  +SP 
Sbjct: 163 TRGGKFTLSVAYSPDGKYIASGAIDG---IINIFDVTYGKVLRTLEGHAMPIRSLCFSPD 219

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
            + L+ +     D   KLY +
Sbjct: 220 SQLLLTASD---DGHMKLYDV 237



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 60/223 (26%), Gaps = 17/223 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V   D   +++        +     S +  K A           + L D         
Sbjct: 63  VWVPQDDTLKLKHKLTGHSLGVVSIAVSSDGSKCA----SSSLDSSLRLWDLESGDKLSN 118

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYS 310
           I      I    FS + K     V    A  I+   ++S   E+   T      +S +YS
Sbjct: 119 IEVGPVDIWTVVFSPDDK---FVVSGSHAGKIHLYGVESGKQEQTLDTRGGKFTLSVAYS 175

Query: 311 PDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           PD   I       G     + +         R  +          +SP   L+  T    
Sbjct: 176 PDGKYIA-----SGAIDGIINIFDVTYGKVLRTLEGHAMPIRSLCFSPDSQLLL-TASDD 229

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
               +  +K       +    S +    +S  G+    S    
Sbjct: 230 GHMKLYDVKDANLAGTMSGHASWVLGVAFSQDGQQFASSSSDH 272



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 74/208 (35%), Gaps = 22/208 (10%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F+    FV     +G I   L  ++  G   + L     +      +SP+ + +A    
Sbjct: 130 VFSPDDKFVVSGSHAGKIH--LYGVES-GKQEQTLDTRGGKFTLSVAYSPDGKYIASGAI 186

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---D 288
           D      + + D    +  + +      I +  FS +  + L++   D  M +Y V   +
Sbjct: 187 DG----IINIFDVTYGKVLRTLEGHAMPIRSLCFSPD-SQLLLTASDDGHMKLYDVKDAN 241

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           L       ++      +  ++S D  Q    S  +   +++ +      ++ +   +E +
Sbjct: 242 LAGT----MSGHASWVLGVAFSQDGQQFA-SSSSDHTVKIWELAR----RQCLHTFREHN 292

Query: 349 Y--FDPVWSPQGDLIAFTKFSGEKFAIG 374
              +   ++PQ + +  +    +   + 
Sbjct: 293 DQVWAVKYNPQKNNVIASVSEDKSINLY 320


>gi|291408359|ref|XP_002720482.1| PREDICTED: WD repeat domain 38 [Oryctolagus cuniculus]
          Length = 336

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 9/164 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    FSP+ + +  A+ D      VY  +TR  R   R+G     +   RF
Sbjct: 18  FFSQHHGEVNFSAFSPDGRTLLTASDDG----CVYGWETRSGRLLWRLGGHTGPVKCCRF 73

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G+    S  +D  + ++ V  ++     L        + S+SPDS Q+         
Sbjct: 74  SPDGRLCA-STSRDCTIRLWDV-ARAQCLRVLEGHQRSVETVSFSPDSKQLA---SGGWD 128

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +Q+ + +     + ++      S     +SP  + +A   +   
Sbjct: 129 KQVMLWEVQSGQRLQLLTGHRDSVQSSDFSPSANCLATGSWDSS 172



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 49/154 (31%), Gaps = 8/154 (5%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R  K        +    FS +G+  L +   D  +  +          RL          
Sbjct: 14  RRVKFFSQHHGEVNFSAFSPDGRTLL-TASDDGCVYGWET-RSGRLLWRLGGHTGPVKCC 71

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD       S       + +     +   R+ +  + S     +SP    +A   + 
Sbjct: 72  RFSPDGRLCASTSR---DCTIRLWDVARAQCLRVLEGHQRSVETVSFSPDSKQLASGGWD 128

Query: 368 GEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPS 400
            +     V    G + +LL    + +Q+  +SPS
Sbjct: 129 KQVMLWEVQS--GQRLQLLTGHRDSVQSSDFSPS 160



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 76/226 (33%), Gaps = 20/226 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D   A    +     + +    FSP+ +++A   +D     +V L + +
Sbjct: 82  STSRDCTIRLWDVARAQCLRVLEGHQRSVETVSFSPDSKQLASGGWDK----QVMLWEVQ 137

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER----LTNTL 301
             +  + +   R  + +  FS +      +   D ++ I+  DL++   E     L    
Sbjct: 138 SGQRLQLLTGHRDSVQSSDFSPSANCLA-TGSWDSSVRIW--DLRAGTLEVSHQELEGHR 194

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  YS         +     + +++ +   S      +          +SP    +
Sbjct: 195 SNISCLCYSASG----LLASGSWDKTIHIWKPATSSPLVKLKGHTTWVKSIAFSPDELWL 250

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
           A    +G    + V   +  +    V+       A  ++P G+ L+
Sbjct: 251 A---SAGYSHRVKVWDCNTGKCLETVKGVLDVAHACAFTPDGKLLV 293



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/131 (12%), Positives = 45/131 (34%), Gaps = 5/131 (3%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +     ++           +    FSP++  +A A Y      RV + D  
Sbjct: 210 SGSWDKTIHIWKPATSSPLVKLKGHTTWVKSIAFSPDELWLASAGYSH----RVKVWDCN 265

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  + +     +  A  F+ +GK  +          ++     + A     +  + ++
Sbjct: 266 TGKCLETVKGVLDVAHACAFTPDGKLLVSGAADQSRGQVHCSSRPARAPRMYQHHRWPDL 325

Query: 306 SASYSPDSSQI 316
           +  +    +++
Sbjct: 326 TP-FPAKGAKV 335


>gi|303321980|ref|XP_003070984.1| WD domain, G-beta repeat containing protein [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240110681|gb|EER28839.1| WD domain, G-beta repeat containing protein [Coccidioides posadasii
           C735 delta SOWgp]
          Length = 847

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 70/202 (34%), Gaps = 18/202 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S +   +A A+    D L + +++       K + +    +    F  +G+   +S  
Sbjct: 104 AISKDGDWLAVAS----DELAIKIVNIEDMTQVKYLRDQTKGVKHVTFDPSGRYVTVSCS 159

Query: 278 KDEAMDIYS--------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            D  + +YS        +        RL N       A + PD +   F +    K+ + 
Sbjct: 160 -DGIIYVYSFTETEPSLIQKIDGVIRRLENEDEGTSQAVWHPDGT--AFAAVEATKDIVV 216

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   + + QKR S    A      WSP G L+A    +G    I + +          + 
Sbjct: 217 VSSRDWTKQKRFSNGHTADITALAWSPNGALLA---SAGADRQIVLWETRTQSILRKYDF 273

Query: 390 SNLQAPTWSPSGRSLIFSRKKD 411
           +N+    W P    + F+    
Sbjct: 274 ANVINLAWHPVNNEVSFTTSDG 295


>gi|150866779|ref|XP_001386490.2| TFIID and SAGA subunit [Scheffersomyces stipitis CBS 6054]
 gi|149388035|gb|ABN68461.2| TFIID and SAGA subunit [Scheffersomyces stipitis CBS 6054]
          Length = 782

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/251 (14%), Positives = 88/251 (35%), Gaps = 22/251 (8%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           F+    + G    S+   DR  ++           ++   FSP+ + +   + D    +R
Sbjct: 473 FIKLWSLDGRPLKSVFKRDRYNSDNTRKLIGHSGPVYSVSFSPDNRYLLSGSED--KTVR 530

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++ +D+       +  N    I   +FS  G     +   D+   +++ D       R+ 
Sbjct: 531 LWSLDSYTALVSYKGHNQP--IWDVKFSPLGHYFA-TASHDQTARLWATDHIY--PLRIF 585

Query: 299 NTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                ++    + P+S+  VF    +   +++       +  R+             SP 
Sbjct: 586 AGHINDVDCVEFHPNSNY-VFTGSSDKTCRMW--DVQTGNCVRVFMGHTGPVNCMAVSPD 642

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGD 413
           G  +A    +GE   + +    G+  RL     + ++     ++S  G  L+       D
Sbjct: 643 GRWLA---SAGEDSVVNIWDA-GTGRRLKTMKGHGRSSIYSLSFSRDGGVLV---SGGAD 695

Query: 414 TGSKLYSIDLN 424
              +++ +  +
Sbjct: 696 NTVRVWDVKRD 706



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/215 (13%), Positives = 65/215 (30%), Gaps = 20/215 (9%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D   +  V+  D       +++      + +  FS + +  L S  +D+ + ++S+D
Sbjct: 477 WSLDGRPLKSVFKRDRYNSDNTRKLIGHSGPVYSVSFSPDNRYLL-SGSEDKTVRLWSLD 535

Query: 289 LQSNATERLTNTLFINISASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
               +   L +    N    +    SP        S     +   +  ++     RI   
Sbjct: 536 ----SYTALVSYKGHN-QPIWDVKFSPLGHYFATASH---DQTARLWATDHIYPLRIFAG 587

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                    + P  + + FT  S +   +  ++        +     +     SP GR L
Sbjct: 588 HINDVDCVEFHPNSNYV-FTGSSDKTCRMWDVQTGNCVRVFMGHTGPVNCMAVSPDGRWL 646

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                   D+   ++     G    L     +   
Sbjct: 647 A---SAGEDSVVNIWDA---GTGRRLKTMKGHGRS 675



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 67/206 (32%), Gaps = 31/206 (15%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSP---ASWRKIAHTIS------ 159
            V     +R  +        RLW +     ++  K  + P     +  + H  +      
Sbjct: 510 SVSFSPDNRYLLSGSEDKTVRLWSLDSYTALVSYKGHNQPIWDVKFSPLGHYFATASHDQ 569

Query: 160 -------DDIYQ-SITGEKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPS 209
                  D IY   I     +    + F   S  V +G    +  + D    N   +   
Sbjct: 570 TARLWATDHIYPLRIFAGHINDVDCVEFHPNSNYVFTGSSDKTCRMWDVQTGNCVRVFMG 629

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSN 268
               +     SP+ + +A       +   V + D    R  K + G+ RS I +  FS +
Sbjct: 630 HTGPVNCMAVSPDGRWLA----SAGEDSVVNIWDAGTGRRLKTMKGHGRSSIYSLSFSRD 685

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT 294
           G   L+S   D  + ++ V   +N  
Sbjct: 686 GG-VLVSGGADNTVRVWDVKRDTNDA 710


>gi|126641851|ref|YP_001084835.1| senescence marker protein-30 (SMP-30) [Acinetobacter baumannii ATCC
           17978]
 gi|126387735|gb|ABO12233.1| Senescence marker protein-30 (SMP-30) [Acinetobacter baumannii ATCC
           17978]
          Length = 292

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 10/158 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQI----LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           L  +D D  N++++      +    L + R     + V  +    ED     L     + 
Sbjct: 75  LYQLDFDTGNLKFICNPEPDLPQNRLNDGRVDRQGRFVFGSMNRLEDGNTASLYGLNANY 134

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +++ N  +   +  +S +G +   +      +  Y  DL++      T    I+ S  
Sbjct: 135 KIEKLENNINTSNSICWSPDGTKLYFADTWQGEIWSYDYDLETGQISNKTTFCKIDTSDG 194

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            S D S +    DREG   L+  +       R   D +
Sbjct: 195 GSADGSTV----DREGY--LWNAKVYSGQLVRYRPDGQ 226


>gi|222087140|ref|YP_002545675.1| hypothetical protein Arad_3905 [Agrobacterium radiobacter K84]
 gi|221724588|gb|ACM27744.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 329

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 86/248 (34%), Gaps = 24/248 (9%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + +++    +  V+     S  V   DG+   +      + L    F+P   ++A A Y+
Sbjct: 88  WITQLAAGPQGAVAYAYGKSSFVRLADGSTKEFTEERTVEGL---AFAPKGLRIAAARYN 144

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ-S 291
                 V L    +   P  +  ++       FS +G+  + ++Q++ A+  + +D +  
Sbjct: 145 G-----VSLHWVGMSAQPINL-EWKGAHTGVTFSPDGQFVVTTMQEN-ALHGWKLDSKPG 197

Query: 292 NATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN------GSDQKRISQ 343
                 R+T       S S+S     +       G     V          G   + +  
Sbjct: 198 GEARHMRMTGYPAKVKSLSWSAKGKWLA----SSGAPAAIVWPFQSKDGPMGKAPQELGT 253

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                     + P  D++A     G   A+ +     +  R   +   + + +WS SG+ 
Sbjct: 254 RANIMATSVKFHPVEDILAIGFIDGMILAVRIGDAKEALLRRPGK-GAITSMSWSKSGKL 312

Query: 404 LIFSRKKD 411
           L F+ +  
Sbjct: 313 LAFASEAG 320



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 77/220 (35%), Gaps = 16/220 (7%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            ++D   +  T E+      + F  + +     + +   +   G + + +          
Sbjct: 111 RLADGSTKEFTEERTV--EGLAFAPKGLRIAAARYNGVSLHWVGMSAQPINLEWKGAHTG 168

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK--RIGNFRSMILAPRFSSNGKRALI 274
             FSP+ Q V   T   E+ L  + +D++     +  R+  + + + +  +S+ GK    
Sbjct: 169 VTFSPDGQFV--VTTMQENALHGWKLDSKPGGEARHMRMTGYPAKVKSLSWSAKGKWLAS 226

Query: 275 SVQKDEAMDIYSVDLQ--SNATERL-TNTLFINISASYSPDSSQIV--FESDREGKEQLY 329
           S      +  +         A + L T    +  S  + P    +   F         + 
Sbjct: 227 SGAPAAIVWPFQSKDGPMGKAPQELGTRANIMATSVKFHPVEDILAIGFI-----DGMIL 281

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            ++   + +  + +  + +     WS  G L+AF   +G+
Sbjct: 282 AVRIGDAKEALLRRPGKGAITSMSWSKSGKLLAFASEAGD 321


>gi|242217820|ref|XP_002474706.1| predicted protein [Postia placenta Mad-698-R]
 gi|220726124|gb|EED80084.1| predicted protein [Postia placenta Mad-698-R]
          Length = 292

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 74/206 (35%), Gaps = 15/206 (7%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             D ++ +  FSP+  +   A+ D      V +  T    A   +     +I    FSS+
Sbjct: 93  HHDAMVMKVGFSPDGTRFVSASADS----TVCIWSTEDGAALSVLHGHMGVIHTMSFSSD 148

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+R + +   D    ++S  +  +    +     +   A +SPD   ++      G + +
Sbjct: 149 GRRIV-TGSDDGKAKVWSA-VSGDCFVTIDEKAGVVRQAMFSPDDQYVL----TAGTDMM 202

Query: 329 YVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             +     G   + I    +A      +SP G    F   S +        +DG+   +L
Sbjct: 203 ARVNDSYTGERVRVIEGHHDAMVMKVGFSPDGTR--FVSASADSTVCIWSTEDGAALSVL 260

Query: 387 V-EDSNLQAPTWSPSGRSLIFSRKKD 411
                 + A ++S  GR ++      
Sbjct: 261 HGHMGVIHAMSFSSDGRRIVTGSDDG 286



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 81/264 (30%), Gaps = 46/264 (17%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
           ++LV+G V            RLW + + +++                H      + ++  
Sbjct: 67  ELLVSGSV--------DFTVRLWSLTNGRKLAE-------------GH------HDAMVM 99

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           + G       FVS S  S     ++C+    DGA +  +      ++    FS + +++ 
Sbjct: 100 KVGFSPDGTRFVSASADS-----TVCIWSTEDGAAL-SVLHGHMGVIHTMSFSSDGRRIV 153

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D +      +           I     ++    FS + +     +     M     
Sbjct: 154 TGSDDGK----AKVWSAVSGDCFVTIDEKAGVVRQAMFSPDDQ---YVLTAGTDMMARVN 206

Query: 288 DLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           D  +    R+   +   + +   +SPD ++ V  S       + +  +       +    
Sbjct: 207 DSYTGERVRVIEGHHDAMVMKVGFSPDGTRFVSAS---ADSTVCIWSTEDGAALSVLHGH 263

Query: 346 EASYFDPVWSPQGDLIAFTKFSGE 369
                   +S  G  I      G+
Sbjct: 264 MGVIHAMSFSSDGRRIVTGSDDGK 287



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 5/89 (5%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             G  +R +    D ++ +  FSP+  +   A+ D      V +  T    A   +    
Sbjct: 209 YTGERVRVIEGHHDAMVMKVGFSPDGTRFVSASADS----TVCIWSTEDGAALSVLHGHM 264

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +I A  FSS+G+R + +   D    ++S
Sbjct: 265 GVIHAMSFSSDGRRIV-TGSDDGKAKVWS 292


>gi|158334595|ref|YP_001515767.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158304836|gb|ABW26453.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1194

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 75/229 (32%), Gaps = 21/229 (9%)

Query: 192 SLCVMDRDGA--------NIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLM 242
            L +   DG         N R   PS       P  FSP+ +++A   Y D     + L 
Sbjct: 719 QLAIGYLDGQVSLWHLSSNRRQWLPSDVTSQESPLAFSPDDRQLA-MGYSDGQ---IQLW 774

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTL 301
           D    +  + +    + I +  FS++G     S   D  + I+  DLQ+    + L    
Sbjct: 775 DVYQAKRIRILQGHTTQIFSVAFSTDGHLLA-SSSGDNTVRIW--DLQTGQCLKCLQGHT 831

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               + ++ PD+  +   S+      + V         +         +    SP   ++
Sbjct: 832 SRVSTVAFHPDNLCLASGSE---DSTVRVWNVQTGQLLKCLNGYNDYVWSVAHSPTHTIV 888

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           A                 G Q  L      +++  +S  G+ L+ +   
Sbjct: 889 ASGSNDRGVRLWNTQSGQGVQ-NLEGHSGRVRSVAYSADGKVLVSATYS 936



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 81/235 (34%), Gaps = 36/235 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +    S   ++    FS +   +A  + D      + + + +     + +      +
Sbjct: 606 YQHQQTLSSHKVLILSITFSNDGCLIASCSVDH----TIKIWNVKSGSCIQTLKGHTGAV 661

Query: 261 LAPRFSS----NGKRALISVQKDEAMDIY---------SVDLQSNATERLTNTLFINISA 307
           ++  F      +    L S  +D ++ ++         +++ +  +   +T         
Sbjct: 662 MSVAFQPQTGADPDYILASASQDGSVKLWNISTQDCIQTLNAEGQSARSVT--------- 712

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            ++    Q+      +G+  L+ + SN   ++ +  D  +      +SP    +A     
Sbjct: 713 -FNSSGDQLA-IGYLDGQVSLWHLSSN--RRQWLPSDVTSQESPLAFSPDDRQLAMGYSD 768

Query: 368 GEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           G+     V +    + R+L    + + +  +S  G  L  S    GD   +++ +
Sbjct: 769 GQIQLWDVYQA--KRIRILQGHTTQIFSVAFSTDGHLLASSS---GDNTVRIWDL 818



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 46/295 (15%), Positives = 90/295 (30%), Gaps = 39/295 (13%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
             +        + +LWDV   K+I                      I Q  T +   F+  
Sbjct: 760  RQLAMGYSDGQIQLWDVYQAKRI---------------------RILQGHTTQ--IFSVA 796

Query: 177  ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                   + S    N++ + D                +    F P+   +A  + D    
Sbjct: 797  FSTDGHLLASSSGDNTVRIWDLQTGQCLKCLQGHTSRVSTVAFHPDNLCLASGSEDS--- 853

Query: 237  LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TE 295
              V + + +  +  K +  +   + +   S      + S   D  + ++  + QS    +
Sbjct: 854  -TVRVWNVQTGQLLKCLNGYNDYVWSVAHSPT-HTIVASGSNDRGVRLW--NTQSGQGVQ 909

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             L        S +YS D   +V         ++ V  S         +      +D    
Sbjct: 910  NLEGHSGRVRSVAYSADGKVLV---SATYSYEIKVWDSTNGICLNTFRMPGEWCWDIALR 966

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSR 408
            P GD++A +   G    + +      +    L+ E+       +SP G+ L  SR
Sbjct: 967  PDGDVLAVS---GGDNNVHLWNIHTGELLNTLVGEEHYALGLAFSPLGQYLATSR 1018



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 33/260 (12%), Positives = 74/260 (28%), Gaps = 15/260 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     S+ + +    +      +  Q      F+ +  ++A    D     +V L    
Sbjct: 680 SASQDGSVKLWNISTQDCIQTLNAEGQSARSVTFNSSGDQLAIGYLDG----QVSLWHLS 735

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +R      +  S      FS + ++  +    D  + ++  D+      R+       I
Sbjct: 736 SNRRQWLPSDVTSQESPLAFSPDDRQLAMGYS-DGQIQLW--DVYQAKRIRILQGHTTQI 792

Query: 306 -SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++S D   +   S   G   + +         +  Q   +      + P    +A  
Sbjct: 793 FSVAFSTDGHLLASSS---GDNTVRIWDLQTGQCLKCLQGHTSRVSTVAFHPDNLCLASG 849

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                   + V      Q    +   N    + + S    I +   + D G +L++    
Sbjct: 850 SEDST---VRVWNVQTGQLLKCLNGYNDYVWSVAHSPTHTIVASGSN-DRGVRLWNTQSG 905

Query: 425 GRNETLINTPAYASDPQWVG 444
              + L           +  
Sbjct: 906 QGVQNLEGHSGRVRSVAYSA 925



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 22/188 (11%), Positives = 56/188 (29%), Gaps = 10/188 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   +     D  ++    +     +            I +  +S NG    I+      
Sbjct: 540 DLSHLTIQQADLREVKLHQVNFAHANLESTLFSETLGSIFSLAYSPNGSYLAIA--DTGE 597

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + +Y    +    + L++   + +S ++S D   I   S       + +         + 
Sbjct: 598 IKLYDFP-RYQHQQTLSSHKVLILSITFSNDGCLIASCSV---DHTIKIWNVKSGSCIQT 653

Query: 342 SQDKEASYFDPVWSP----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +    +     + P      D I  +        +  +      + L  E  + ++ T+
Sbjct: 654 LKGHTGAVMSVAFQPQTGADPDYILASASQDGSVKLWNISTQDCIQTLNAEGQSARSVTF 713

Query: 398 SPSGRSLI 405
           + SG  L 
Sbjct: 714 NSSGDQLA 721


>gi|256393005|ref|YP_003114569.1| hypothetical protein Caci_3829 [Catenulispora acidiphila DSM 44928]
 gi|256359231|gb|ACU72728.1| WD-40 repeat protein [Catenulispora acidiphila DSM 44928]
          Length = 652

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 78/238 (32%), Gaps = 16/238 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           YLT   D +     FSP+ + +  A++D    L             + +     +     
Sbjct: 388 YLTGDTDSVNAV-AFSPDGRTLVGASWDKTIRLWNVASPLHAVAIGRPVIGTDKVNT-VA 445

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESD 321
           FS NGK    S   D  + ++++             T+      + ++SPD + +   + 
Sbjct: 446 FSPNGKTLA-SGGDDRTVRMWNIADPPALAPACPPLTDHTNAVNAVAFSPDGTILA-SAG 503

Query: 322 REGKEQLYVM--QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            +   +L+ +   +      R       S     +SP G  +A   +        V    
Sbjct: 504 WDFTIRLWEVSDPARTRAAGRPLSGHTYSVAAVAFSPDGKTLASAGWDNTVRLWDVSNPA 563

Query: 380 GSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            + E  L    +        +SP GR++        D   +L+ +  +      I +P
Sbjct: 564 QATEIGLPLTGHTDHVQGIAYSPDGRTVA---SGSWDKTIRLWDVS-DPTRAKPIGSP 617



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 30/221 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF----RSMILAPRFSSNGKRAL 273
            F+ +   +A  +YD      ++L D      P ++G +       + A  FS +G+  +
Sbjct: 354 AFASSGTLLAGGSYDH----TIHLWDVANPATPLQVGPYLTGDTDSVNAVAFSPDGRTLV 409

Query: 274 -ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             S  K   +   +  L + A  R         + ++SP+   +       G ++   M 
Sbjct: 410 GASWDKTIRLWNVASPLHAVAIGRPVIGTDKVNTVAFSPNGKTLA----SGGDDRTVRMW 465

Query: 333 -----SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-----KDGSQ 382
                   +       D   +     +SP G ++A    +G  F I + +     +  + 
Sbjct: 466 NIADPPALAPACPPLTDHTNAVNAVAFSPDGTILA---SAGWDFTIRLWEVSDPARTRAA 522

Query: 383 ERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            R L     ++ A  +SP G++L        D   +L+ + 
Sbjct: 523 GRPLSGHTYSVAAVAFSPDGKTLA---SAGWDNTVRLWDVS 560


>gi|229094882|ref|ZP_04225886.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock3-29]
 gi|229113836|ref|ZP_04243270.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock1-3]
 gi|228669570|gb|EEL24978.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock1-3]
 gi|228688488|gb|EEL42362.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock3-29]
          Length = 652

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 51/338 (15%), Positives = 115/338 (34%), Gaps = 62/338 (18%)

Query: 143 KFFSSPASWRKIAHTISDDIYQS-------ITGEKGDFNSRILFVSESV-----VSGIIK 190
            F    A+W+   +     IY+        +T    D    +              G  K
Sbjct: 33  AFVKKTANWKDNTYRNHVWIYEKEKGKSYPLTIGDIDSTHPLWSPDSKGIAYLSPVGDGK 92

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE---------------- 234
           N +     DG +   +T  ++ +    ++ P  +   Y     E                
Sbjct: 93  NQIFFKSLDGYSEVQITDEKEGVSNF-KWEPTGKGFYYIAQSKECEEIKKRKERYGDFHH 151

Query: 235 -----DILRVYLMDTR----IDRAPKRIGNFRSMILAPRF-------SSNGKRALI---- 274
                    +Y ++       D+  +++     +     F       S+NGK+ +     
Sbjct: 152 VGKEHQNNCLYYIEIEKVKQNDKQERKVSGVYQLTDGKDFYIHNFDISNNGKKVVCMATP 211

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREG--------K 325
           S+      DIY +D+++   +++     +  S  +SP+  +I +  S RE          
Sbjct: 212 SLNDYMNGDIYILDVEAGELQKMNIDTLLGASICFSPEGDKICYSASIREKDYYRNHIQD 271

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             L +   N  +  +   + +++     W+ +G  I         + IG++ +DG+ E L
Sbjct: 272 NTLEIYDMNTGEVIQPLTNFDSTVTPLQWTAKG--ILIRWQDKTNYRIGLLAEDGTVEAL 329

Query: 386 LVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             + D  +   + +  G  + +++    +T  ++Y  D
Sbjct: 330 SDKVDGFIMDASITKDGNHITYNKAITNET-FEIYLDD 366



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 65/202 (32%), Gaps = 45/202 (22%)

Query: 266 SSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GK                   ++  + +   +  LT     +    +SPDS  I + 
Sbjct: 26  SDDGKNVAFVKKTANWKDNTYRNHVWIYEKEKGKSYPLTIGDIDSTHPLWSPDSKGIAYL 85

Query: 320 SDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---------- 368
           S   +GK Q++    +G  + +I+ +KE    +  W P G    +   S           
Sbjct: 86  SPVGDGKNQIFFKSLDGYSEVQITDEKEG-VSNFKWEPTGKGFYYIAQSKECEEIKKRKE 144

Query: 369 --EKFA---------------IGVMKKDGSQER------LLVEDSNL--QAPTWSPSGRS 403
               F                I  +K++  QER       L +  +        S +G+ 
Sbjct: 145 RYGDFHHVGKEHQNNCLYYIEIEKVKQNDKQERKVSGVYQLTDGKDFYIHNFDISNNGKK 204

Query: 404 LIFSRKK--DGDTGSKLYSIDL 423
           ++       +      +Y +D+
Sbjct: 205 VVCMATPSLNDYMNGDIYILDV 226



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 9/99 (9%)

Query: 354 WSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  G  +AF K +        +  + + +K+ G    L + D +   P WSP  + + +
Sbjct: 25  ISDDGKNVAFVKKTANWKDNTYRNHVWIYEKEKGKSYPLTIGDIDSTHPLWSPDSKGIAY 84

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
                GD  ++++   L+G +E  I       S+ +W  
Sbjct: 85  LSPV-GDGKNQIFFKSLDGYSEVQITDEKEGVSNFKWEP 122



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++ +        ++   +     P+WSP   
Sbjct: 22  STNISDDGKNVAFVKKTANWKDNTYRNHVWIYEKEKGKSYPLT-IGDIDSTHPLWSPDSK 80

Query: 360 LIAFTKFSG-EKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G  K  I     DG S+ ++  E   +    W P+G+   +  + 
Sbjct: 81  GIAYLSPVGDGKNQIFFKSLDGYSEVQITDEKEGVSNFKWEPTGKGFYYIAQS 133


>gi|254415520|ref|ZP_05029280.1| dienelactone hydrolase family [Microcoleus chthonoplastes PCC 7420]
 gi|196177701|gb|EDX72705.1| dienelactone hydrolase family [Microcoleus chthonoplastes PCC 7420]
          Length = 633

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 46/237 (19%), Positives = 90/237 (37%), Gaps = 20/237 (8%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            +     P+ SP+ + +AY   D++++L+V+L     D   +   + +  I    ++ N 
Sbjct: 24  GNPDRTRPQLSPDGKYLAYIAPDEKNVLQVWLRTVGEDDDQQLTADQKRGIRLYVWTYNP 83

Query: 270 KRALI--SVQKDEAMDIYSVDLQSNATERLTNTLF-----INISASYSPDSSQIVFESDR 322
            + +       DE   +Y V++QS     LT         I++   + PD   +    + 
Sbjct: 84  NQLIYLQDSDGDENFHLYLVNVQSKLVRDLTPFQGVKAQPIDLDPEF-PDQVLVGMNLND 142

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL-----IAFTKFSGEKFAIGVMK 377
             K  +Y +  N    +    + +       W           IA     G    +    
Sbjct: 143 RQKFDVYRVNLNNGAVE---FETDNPGNIVSWVADAQFQIRAAIA-ATPDGGSDLLFRET 198

Query: 378 KDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            D S E L     + +  A T+S  G++L  +   D +   +L ++DL  R ET++ 
Sbjct: 199 PDKSFELLRHWGPDDEGSAVTFSQDGKTLYITGSHDAN-AQRLIALDLASRQETVMA 254



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 4/106 (3%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVED--SNLQAP 395
            R +         P  SP G  +A+     +    + +       ++ L  D    ++  
Sbjct: 18  PRETLFGNPDRTRPQLSPDGKYLAYIAPDEKNVLQVWLRTVGEDDDQQLTADQKRGIRLY 77

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASDP 440
            W+ +   LI+ +  DGD    LY +++  +    L       + P
Sbjct: 78  VWTYNPNQLIYLQDSDGDENFHLYLVNVQSKLVRDLTPFQGVKAQP 123


>gi|40557601|gb|AAR88094.1| notchless-like protein [Solanum chacoense]
          Length = 482

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 63/155 (40%), Gaps = 13/155 (8%)

Query: 182 ESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    ++ + +     + +       Q++    FSP+ Q +A A++D      V 
Sbjct: 339 ERLVSGSDDFTMFLWEPAVSKHPKTRMTGHQQLVNHVYFSPDGQWIASASFDK----SVK 394

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L +    +           +    +S++  R L+S  KD  + ++  D+++   ++    
Sbjct: 395 LWNGTTGKFVAAFRGHVGPVYQISWSAD-SRLLLSGSKDSTLKVW--DIRTKKLKQDLPG 451

Query: 301 LFINISAS-YSPDSSQIVFESDREGKEQLYVMQSN 334
               + A  +SPD  ++       GK+++  +   
Sbjct: 452 HADEVFAVDWSPDGEKVA----SGGKDRVLKLWMG 482



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 9/105 (8%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + +    FSP+ +++A  + D      V L D             R+ +L+  +S +
Sbjct: 115 GHTEAVLSVAFSPDGRQLASGSGDT----TVRLWDLNTQTPLFTCQGHRNWVLSVAWSPD 170

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP 311
           GK  + S  K   +  +  DLQ+       LT         S+ P
Sbjct: 171 GKHLV-SGSKAGELICW--DLQTGKPLGNPLTGHKKWITGISWEP 212



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 49/133 (36%), Gaps = 8/133 (6%)

Query: 232 DDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L +  + + PK R+   + ++    FS +G+    S   D+++ ++  +  
Sbjct: 343 SGSDDFTMFLWEPAVSKHPKTRMTGHQQLVNHVYFSPDGQWIA-SASFDKSVKLW--NGT 399

Query: 291 SNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +          +      S+S DS  ++  S       L V        K+         
Sbjct: 400 TGKFVAAFRGHVGPVYQISWSADSRLLLSGSK---DSTLKVWDIRTKKLKQDLPGHADEV 456

Query: 350 FDPVWSPQGDLIA 362
           F   WSP G+ +A
Sbjct: 457 FAVDWSPDGEKVA 469



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 43/150 (28%), Gaps = 11/150 (7%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++   +  +   R+T    +     +SPD   I   S     + + +  
Sbjct: 341 LVSGSDDFTMFLWEPAVSKHPKTRMTGHQQLVNHVYFSPDGQWIASASF---DKSVKLWN 397

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +      +   WS    L+           + V      + +  +     
Sbjct: 398 GTTGKFVAAFRGHVGPVYQISWSADSRLLLSGSKDST---LKVWDIRTKKLKQDLPGHAD 454

Query: 393 QAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
           +     WSP G  +        D   KL+ 
Sbjct: 455 EVFAVDWSPDGEKVA---SGGKDRVLKLWM 481



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLF 302
           + R    I      +L+  FS +G++   S   D  + ++ ++ Q+     L        
Sbjct: 106 VTRCSATIAGHTEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQT----PLFTCQGHRN 160

Query: 303 INISASYSPDSSQIVFES 320
             +S ++SPD   +V  S
Sbjct: 161 WVLSVAWSPDGKHLVSGS 178



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 27/82 (32%), Gaps = 7/82 (8%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
               R + T+  +  A    ++SPD  Q+   S   G   + +   N        Q    
Sbjct: 104 RPVTRCSATIAGHTEAVLSVAFSPDGRQLASGS---GDTTVRLWDLNTQTPLFTCQGHRN 160

Query: 348 SYFDPVWSPQGDLIAFTKFSGE 369
                 WSP G  +     +GE
Sbjct: 161 WVLSVAWSPDGKHLVSGSKAGE 182


>gi|332256124|ref|XP_003277167.1| PREDICTED: WD repeat and SOCS box-containing protein 1 isoform 2
           [Nomascus leucogenys]
          Length = 275

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 61/178 (34%), Gaps = 28/178 (15%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            F+ +G   L+S  +D+ + ++ +    N  + L        S ++SPDSS +       
Sbjct: 31  TFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLC---SVG 87

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + +++   +     R  +          +SP G L+A   +      + +        
Sbjct: 88  ASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALLATASYDT---RVYIWDPHNGD- 143

Query: 384 RLLVEDSNLQAP-----------------TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +L+E  +L  P                 ++S  G  +        D   + + ID +
Sbjct: 144 -ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVA---SLADDKMVRFWRIDED 197



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 65/202 (32%), Gaps = 27/202 (13%)

Query: 185 VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VS     +L V D +D  N+  +       ++   FSP+   +            V+L +
Sbjct: 41  VSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSV----GASKAVFLWN 96

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---------- 293
                  +++      ++A  FS +G     +   D  + I+  D  +            
Sbjct: 97  MDKYTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFP 153

Query: 294 -TERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
               +      +    S S+S D   +   +D +   + + +  +     +++       
Sbjct: 154 PPTPIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG-- 208

Query: 350 FDPVWSPQGDLIAFTKFSGEKF 371
               +S  G ++A     G  +
Sbjct: 209 LCCAFSTDGSVLAAGTHDGSVY 230


>gi|300726777|ref|ZP_07060207.1| immunogenic 75 kDa protein PG4 [Prevotella bryantii B14]
 gi|299775890|gb|EFI72470.1| immunogenic 75 kDa protein PG4 [Prevotella bryantii B14]
          Length = 689

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 65/185 (35%), Gaps = 26/185 (14%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----Q 327
           +   +KD+       +          N++    +  +SPDS  +     +         Q
Sbjct: 203 IFVSEKDDKGKWSQPEPVGGGL----NSIEDEGACCFSPDSRTMYLTRCQTDANYPRYAQ 258

Query: 328 LYVMQSNG-----SDQKRISQDKEASYFDPVWSPQGDLIAFTKF---SGEKFAIGVMKKD 379
           +   + +      +++  IS+D  +SY  P  SP G+ + FT           I  ++  
Sbjct: 259 IVTSERSDAAWGKTNELNISKDSLSSYAHPAISPDGNWLYFTSDMPGGKGGLDIWRVRIT 318

Query: 380 ----GSQERL---LVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETLI 431
               G  E L   +    N + PT+ P+G  L FS     G  G  +Y    +      +
Sbjct: 319 AAGLGGVENLGEPINTAGNEEFPTFRPNGD-LYFSSDGHPGLGGLDIYIAQGDSTAHYRL 377

Query: 432 NTPAY 436
             P Y
Sbjct: 378 FHPGY 382



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 46/148 (31%), Gaps = 20/148 (13%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID----RAPKRIG-- 254
            N   ++         P  SP+   + + +        + +   RI        + +G  
Sbjct: 272 TNELNISKDSLSSYAHPAISPDGNWLYFTSDMPGGKGGLDIWRVRITAAGLGGVENLGEP 331

Query: 255 -NFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERLT------NTLFIN 304
            N       P F  NG     S         +DIY     S A  RL       N+   +
Sbjct: 332 INTAGNEEFPTFRPNGD-LYFSSDGHPGLGGLDIYIAQGDSTAHYRLFHPGYPLNSQGDD 390

Query: 305 ISASYSPDSSQIVFESDRE---GKEQLY 329
              ++    ++  F S+R    G + +Y
Sbjct: 391 FGMTFEGQHNRGFFCSNRGDARGYDHIY 418


>gi|257061665|ref|YP_003139553.1| hypothetical protein Cyan8802_3914 [Cyanothece sp. PCC 8802]
 gi|256591831|gb|ACV02718.1| WD-40 repeat protein [Cyanothece sp. PCC 8802]
          Length = 366

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 69/215 (32%), Gaps = 25/215 (11%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG+ +  L       + +   SP+ + +   +  D     + + D       + +G    
Sbjct: 154 DGSKV-NLLKGHSGKISDLALSPDDKILVSVSASDR---TIRIWDFATGNLIETLGVDIG 209

Query: 259 MILAPRFSSNGKRALISVQKDEAM----DIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                 F+ +G   +     D+      D+ +++L  ++ ++             +PD  
Sbjct: 210 PTNNVAFTPDGMTFVTGAIGDDRTLKFWDLPTLELIRSSPQQ----PGYINDLKITPDGK 265

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++V       +  + V       +    +           SP   ++A     G      
Sbjct: 266 KLVAAV----RNYIKVWDLTTGKELLNIKGPRLDINAIAISPDSRVVATANKEGN----- 316

Query: 375 VMKKDGSQERLLV----EDSNLQAPTWSPSGRSLI 405
           +M  D ++ R L         + +  +SP GR L 
Sbjct: 317 IMLFDLTKGRKLTTLEGHKGWVLSLVFSPDGRYLY 351



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 44/127 (34%), Gaps = 5/127 (3%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           ++ +S   + G  N   +      +   ++N + V D                +     S
Sbjct: 243 ELIRSSPQQPGYINDLKITPDGKKLVAAVRNYIKVWDLTTGKELLNIKGPRLDINAIAIS 302

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + VA           + L D    R    +   +  +L+  FS +G+    S  +D+
Sbjct: 303 PDSRVVA----TANKEGNIMLFDLTKGRKLTTLEGHKGWVLSLVFSPDGRYL-YSGAEDK 357

Query: 281 AMDIYSV 287
            + I+ +
Sbjct: 358 IIKIWQL 364



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 60/185 (32%), Gaps = 24/185 (12%)

Query: 238 RVYLMDTRIDRAP----KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--- 290
            +YL +      P    K I  F+ +I A   + +GK  L+         + +VDL+   
Sbjct: 39  EIYLEEIAQSSQPPIMVKDIQGFKGVIKALTMTPDGKILLVGA---GDATLNAVDLELEQ 95

Query: 291 --SNATERLTNTLFINI--SASYSPDSSQIVFESDRE----------GKEQLYVMQSNGS 336
              + T ++ +   I +    ++  +++     SD              E + V+     
Sbjct: 96  VVYSKTHKINDYSSIVVTSQPTFLDETTSNETTSDETPLTGPMLALADDENIRVLSLVDG 155

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +  + +       D   SP   ++     S     I         E L V+        
Sbjct: 156 SKVNLLKGHSGKISDLALSPDDKILVSVSASDRTIRIWDFATGNLIETLGVDIGPTNNVA 215

Query: 397 WSPSG 401
           ++P G
Sbjct: 216 FTPDG 220


>gi|17229844|ref|NP_486392.1| WD-40 repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17131444|dbj|BAB74051.1| WD-40 repeat protein [Nostoc sp. PCC 7120]
          Length = 357

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 57/192 (29%), Gaps = 20/192 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S + + +     D      + + D    R    +  F + I     SS+G+       
Sbjct: 162 AVSSDGKVLVSGALDG-----IRVWDLLQQRPLSTLVRFDNRIDTLAMSSDGQTLA---S 213

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIV-FESDREGKEQLYVMQSNG 335
            D    I   +L +    R  T         +++PD   ++   SDR     + V     
Sbjct: 214 GDTKGVIKLWNLSTGKLIREFTAHSGTVTDITFTPDGQNLISCSSDRT----IKVWHIPS 269

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQ 393
               R              +  G  +A     G    I +      +    L+     + 
Sbjct: 270 EKLSRTLTGHNNWVNAIAINRDGKTLASAGRDG----IKLWDLSTGELLNTLIGHSDWVS 325

Query: 394 APTWSPSGRSLI 405
           A  +SP G++L 
Sbjct: 326 AIAFSPDGKTLA 337



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/318 (15%), Positives = 102/318 (32%), Gaps = 40/318 (12%)

Query: 82  ISQDSFKQKITNPDSIPRFQD---WNSLGAQVLVTGRVIKEGKDRLRVE--------FRL 130
           +S     Q I NP  I  F +    +SL A       +      R  V          RL
Sbjct: 37  VSAADTVQVIPNPQPIEGFTNPSLLHSLNAHSGRVKSLTFSPDSRTIVSGGAYNDGIIRL 96

Query: 131 WDVKDRKQI--IGKKFFSSPASW------RKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           W+    K++  I K   ++  S       + +A + SD+I      +   F    +  + 
Sbjct: 97  WNSTTGKRVGTINKAQKNAVESLVISPDGQTLASSGSDNIINLWNLKNNQFTRSFVGHTA 156

Query: 183 SVVSGIIKNS-----------LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           SV+S  + +            + V D             D  +     S + Q +A  + 
Sbjct: 157 SVMSLAVSSDGKVLVSGALDGIRVWDLLQQRPLSTLVRFDNRIDTLAMSSDGQTLA--SG 214

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D + +  + L +    +  +        +    F+ +G+   IS   D  + ++ +  + 
Sbjct: 215 DTKGV--IKLWNLSTGKLIREFTAHSGTVTDITFTPDGQNL-ISCSSDRTIKVWHIPSE- 270

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
             +  LT       + + + D   +       G++ + +   +  +              
Sbjct: 271 KLSRTLTGHNNWVNAIAINRDGKTLA----SAGRDGIKLWDLSTGELLNTLIGHSDWVSA 326

Query: 352 PVWSPQGDLIAFTKFSGE 369
             +SP G  +A   F G 
Sbjct: 327 IAFSPDGKTLASGGFDGR 344


>gi|113478305|ref|YP_724366.1| WD-40 repeat-containing protein [Trichodesmium erythraeum IMS101]
 gi|110169353|gb|ABG53893.1| WD-40 repeat [Trichodesmium erythraeum IMS101]
          Length = 578

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 70/181 (38%), Gaps = 17/181 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + +     +        +I+     SP+ Q +A  + D+    ++ L + +
Sbjct: 397 SGSWDGTIKIWNLASGELLQTIAGHSEIVNGIAISPDGQFLASGSKDN----QIKLWNLQ 452

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  + I      IL+  FS +  + L S   +  ++I+  +LQ+    +L + L  ++
Sbjct: 453 TGQLVRTINTNSVSILSVVFSPD-SQILASSSSNGTINIW--NLQTG---KLIHNLKEHL 506

Query: 306 SASYS----PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              +S    PD   ++  S     + +   + +    K   +   +       SP G +I
Sbjct: 507 DGVWSIVITPDGKTLISGS---WDKTIKFWELSTGKLKGSLRGHNSYISVVAISPNGQII 563

Query: 362 A 362
            
Sbjct: 564 V 564



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 69/224 (30%), Gaps = 22/224 (9%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           AY      + + + + D                + +   + + ++ +IS   D+ + I+ 
Sbjct: 303 AYIVMGSSNGM-ISVWDIENREIIAIWKAHPESVNSVAVTPD-EQFVISGSDDKTIKIWK 360

Query: 287 VDLQSNA-----TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           +    N       + LT    +    + +P+S   +F S       + +      +  + 
Sbjct: 361 LPKNKNINDISLVQTLTGHTDVVDGVAIAPNSK--IFASG-SWDGTIKIWNLASGELLQT 417

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSP 399
                        SP G  +A          I +      Q          ++ +  +SP
Sbjct: 418 IAGHSEIVNGIAISPDGQFLASGSKDN---QIKLWNLQTGQLVRTINTNSVSILSVVFSP 474

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             + L  S   +G     ++++   G+   LI+      D  W 
Sbjct: 475 DSQILA-SSSSNGT--INIWNL-QTGK---LIHNLKEHLDGVWS 511


>gi|326434228|gb|EGD79798.1| hypothetical protein PTSG_10782 [Salpingoeca sp. ATCC 50818]
          Length = 719

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 69/205 (33%), Gaps = 16/205 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    D+      +SP+   VA  + D      + +  T   +      +    + +  
Sbjct: 310 RIETGHDESCRSCSWSPDGTMVASGSDDR----SLRVWSTDAGQKITVFRDHDDWVNSIA 365

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI---VFESD 321
           +S +  + + S   D  + ++SV  +      L        + ++S D   I    FE D
Sbjct: 366 WSPDSGKIV-SGCGDGVVRVWSV-REDRLLFELKGHKDWVEAVAWSSDGMHIASGAFERD 423

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 + +  +    Q    +  E       + P GD +  +  +     +  +   G 
Sbjct: 424 ----PTIIIWDAVKGAQLFTCRGHEDRLLSLDFHPDGDALV-SGAADNTARVWRVS-SGD 477

Query: 382 QERLL-VEDSNLQAPTWSPSGRSLI 405
           QER+L    S + A  +  +G  + 
Sbjct: 478 QERVLATMTSCVNAVRFCHTGVMVA 502



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 15/132 (11%)

Query: 299 NTLFINISASYSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +   IN    +SPD + +   S     R      Y+       Q RI    + S     W
Sbjct: 268 HHAGINDV-CWSPDYTLLATASSDSTVRTWDASAYMTDE--LRQSRIETGHDESCRSCSW 324

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDG 412
           SP G ++A      +  ++ V   D  Q+  +  D +    +  WSP    ++      G
Sbjct: 325 SPDGTMVA---SGSDDRSLRVWSTDAGQKITVFRDHDDWVNSIAWSPDSGKIV---SGCG 378

Query: 413 DTGSKLYSIDLN 424
           D   +++S+  +
Sbjct: 379 DGVVRVWSVRED 390



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 69/228 (30%), Gaps = 20/228 (8%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG    SL V   D      +    D  +    +SP+  K+     D      V +  
Sbjct: 331 VASGSDDRSLRVWSTDAGQKITVFRDHDDWVNSIAWSPDSGKIVSGCGDG----VVRVWS 386

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R DR    +   +  + A  +SS+G     S   +    I   D    A  +L      
Sbjct: 387 VREDRLLFELKGHKDWVEAVAWSSDGMHIA-SGAFERDPTIIIWDAVKGA--QLFTCRGH 443

Query: 304 NI---SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S  + PD   +V            V + +  DQ+R+     +      +   G +
Sbjct: 444 EDRLLSLDFHPDGDALV---SGAADNTARVWRVSSGDQERVLATMTSCVNAVRFCHTGVM 500

Query: 361 IAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLI 405
           +A     G    F        G +      D +      WSP    ++
Sbjct: 501 VAVGCSDGSVSVFEFF----SGDKLFYFQHDKHWIYCLAWSPMDTHIV 544



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 43/104 (41%), Gaps = 10/104 (9%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G +Q  ++     +  RI  +  A+ F   WSP    IA     G    + +   DG++
Sbjct: 38  SGSDQSVIVHGPNGELDRI-FEGTAAIFAVAWSPDMATIASGDAEG---VLALWDMDGAE 93

Query: 383 ERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +    +   ++  +++  G +++   +   D   KL++ DL
Sbjct: 94  TPRVTTTGHTDCVRCVSFNDRGNAIVSVSQ---DMTLKLWTTDL 134


>gi|47220414|emb|CAG03194.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 475

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 83/226 (36%), Gaps = 16/226 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D     I +L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDMSTLQILHLYTCLDQISHM-DWSSDSLFIL-CAMYKRGMVQVWSLEQPDWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I      +L+ R+S +G+  L + +    + ++S  L + A   +           +
Sbjct: 86  --KIDEGSIGLLSSRWSPDGRHILNTTEFHLRITVWS--LCTKAVSYIKYPKACQKGMDF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S D S +     R+ K+ + V   +     R  + +        WSP G ++A    S  
Sbjct: 142 SRDGSYMALAERRDCKDYVSVFVCDDWHLLRHFETETQDLAGLEWSPNGCVLA-VWDSCL 200

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRK 409
           ++ + +   DG   RLL      +      A  WSPS + L     
Sbjct: 201 EYKVLLYSLDG---RLLSTYGAYEWSLGVKAVAWSPSSQFLAIGSY 243


>gi|188579008|ref|YP_001915937.1| dipeptidyl peptidase IV [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188523460|gb|ACD61405.1| dipeptidyl peptidase IV [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 729

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 62/192 (32%), Gaps = 52/192 (27%)

Query: 263 PRFSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNT----LFINISA-------- 307
           P+ + +G R      KD     +D++  D+ S  T  L ++      I + +        
Sbjct: 26  PKVAPDGSRVTFLRGKDGDRNQLDLWEYDIASGQTRLLVDSKVVLPGIEVLSDVEKARRE 85

Query: 308 -------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                         ++PD+  ++F     G+  LY ++  G+   R     E    D   
Sbjct: 86  RQRIAALTGIVDYQWAPDAHALLFPL--GGELYLYDLRKTGAAAVRKLTHGEGFATDAKL 143

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQAPT 396
           SP+G  ++F +       + V+         L  D                         
Sbjct: 144 SPKGGFVSFVRER----NVWVIDLASGNALQLTHDGSETIGNGMAEFVADEEMDRHTGYW 199

Query: 397 WSPSGRSLIFSR 408
           W+P   ++ F+R
Sbjct: 200 WAPDDSAIAFAR 211



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/315 (15%), Positives = 96/315 (30%), Gaps = 69/315 (21%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--- 217
              + +T  +G      L      VS + + ++ V+D    N   LT    + +      
Sbjct: 126 AAVRKLTHGEGFATDAKLSPKGGFVSFVRERNVWVIDLASGNALQLTHDGSETIGNGMAE 185

Query: 218 -------------RFSPNQQKVAYATYDDEDIL---RVYLMDTRIDRAPKRIGNFRSMIL 261
                         ++P+   +A+A  D+  +    R  +     +   +R        +
Sbjct: 186 FVADEEMDRHTGYWWAPDDSAIAFARIDESHVPVQKRPEVYADHTEVISQRYPQAGQPNV 245

Query: 262 APRF---SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           A +    +   K A   +   +  DIY   +     +RLT           S D   +  
Sbjct: 246 AVQLGVIAPRAKAAARWIDLGKNPDIYLARVDWRDAQRLTFQRQ-------SRDQKTL-- 296

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP---------QGDLIAFTKFSGE 369
                  E +    ++G+ +  I++        P W P          G  + +      
Sbjct: 297 -------ELIETTLASGAQRTLITE------TSPTWVPLSNDLRFLKDGRFL-WNSERSG 342

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG--------RSLIFSRKKDGDTGSKLYSI 421
              + +  +DG     L   +      W   G          + F+  KDG T + +Y++
Sbjct: 343 YAHVYLASEDGRTLTSLTSGN------WVVDGLLAVDETAGMVYFAASKDGPTQTHIYAV 396

Query: 422 DL-NGRNETLINTPA 435
            L  G  E    T  
Sbjct: 397 PLAGGAIEKRSVTNG 411



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 65/202 (32%), Gaps = 55/202 (27%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-------- 263
             L +P+ +P+  +V +    D D  ++ L +  I     R+    S ++ P        
Sbjct: 21  PTLMKPKVAPDGSRVTFLRGKDGDRNQLDLWEYDIASGQTRLL-VDSKVVLPGIEVLSDV 79

Query: 264 -------------------RFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTL 301
                              +++ +    L  +      ++Y  DL+        +LT+  
Sbjct: 80  EKARRERQRIAALTGIVDYQWAPDAHALLFPL----GGELYLYDLRKTGAAAVRKLTHGE 135

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-------- 353
                A  SP    + F  +R     ++V+     +  +++ D   +  + +        
Sbjct: 136 GFATDAKLSPKGGFVSFVRER----NVWVIDLASGNALQLTHDGSETIGNGMAEFVADEE 191

Query: 354 --------WSPQGDLIAFTKFS 367
                   W+P    IAF +  
Sbjct: 192 MDRHTGYWWAPDDSAIAFARID 213


>gi|73994651|ref|XP_534697.2| PREDICTED: similar to WD repeat and SOCS box containing protein 2
           (WSB-2) (CS box-containing WD protein) isoform 1 [Canis
           familiaris]
          Length = 406

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 76/199 (38%), Gaps = 21/199 (10%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           ++ + + +       +   + ++    F+ +G   L+S  +D+ + I+ ++      + L
Sbjct: 136 QIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVL 195

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +  L      S SPD S +       G++ +++         R  +  ++S     +SP 
Sbjct: 196 SGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPD 252

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-------------SNLQAPTWSPSGRSL 404
             L+    +      I      G + RLL                S+L++  +SP G   
Sbjct: 253 SALLVTASYDTN--VIMWDPYTGERLRLLHHTQLDPPMDDSDVHISSLRSVCFSPEG--- 307

Query: 405 IFSRKKDGDTGSKLYSIDL 423
           ++      D   ++++++L
Sbjct: 308 LYLATVADDRLLRIWALEL 326



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 80/270 (29%), Gaps = 45/270 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 18  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKN 77

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKR---------------ALISVQKDEAM 282
           DT+   +PK            +  +P  S   ++                L +   D  +
Sbjct: 78  DTKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDISCLILATGLNDGQI 137

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 138 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 196

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 197 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 254

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            L+ +     DT   ++     G    L++
Sbjct: 255 LLVTASY---DTNVIMWD-PYTGERLRLLH 280


>gi|332526215|ref|ZP_08402348.1| hypothetical protein RBXJA2T_10164 [Rubrivivax benzoatilyticus JA2]
 gi|332110053|gb|EGJ10681.1| hypothetical protein RBXJA2T_10164 [Rubrivivax benzoatilyticus JA2]
          Length = 288

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 65/227 (28%), Gaps = 27/227 (11%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V   DGA  R++  ++D +       P+        +D         + +  D     
Sbjct: 14  LYVSSPDGARTRHIDEAKDAVPT-----PDGSHYVTLEHDLSADTSQVSIKSNSDGRVVH 68

Query: 253 IGNFRSMILAPRFSSN--GKRALISVQ----KDEAMDIYSVDLQSNATERLTNTLFINIS 306
                  +   R S    G   L+        D  +    +  +    +R       +  
Sbjct: 69  QAVLNGYVSKVRPSPLRLGDLLLVWASSAIAGDGVVTAIDLPAR-RTLQRWPTRAAAD-- 125

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAF-- 363
             + PD    V  ++  G   + ++    S    +S          +WS P G  I    
Sbjct: 126 --WLPDGR--VISAEPTGAVHVAIVGQQDSAVGTLS--VPGWTLRGLWSDPTGSRIVTRW 179

Query: 364 ----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                     +  + +   DG+  + L          W+P  RS  F
Sbjct: 180 MRFNASGDPAETDLWIAGADGTGLQRLTRTGLTSYAVWAPDDRSFAF 226



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 8/130 (6%)

Query: 199 DGANIRYLTPSRDQILFEPR-----FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           DG       P+R  +   P      + P+ + ++        +  V   D+ +       
Sbjct: 101 DGVVTAIDLPARRTLQRWPTRAAADWLPDGRVISAEPTGAVHVAIVGQQDSAVGTLSVPG 160

Query: 254 GNFRSMILAPRFSSN-GKRALISVQKDEA-MDIYSVDLQSNATERLTNTLFINISASYSP 311
              R +   P  S    +    +   D A  D++         +RLT T  +   A ++P
Sbjct: 161 WTLRGLWSDPTGSRIVTRWMRFNASGDPAETDLWIAGADGTGLQRLTRT-GLTSYAVWAP 219

Query: 312 DSSQIVFESD 321
           D     F+ D
Sbjct: 220 DDRSFAFDWD 229


>gi|326326081|ref|YP_004250890.1| hypothetical protein VIBNI_0157 [Vibrio nigripulchritudo]
 gi|323669132|emb|CBJ93183.1| conserved hypothetical protein [Vibrio nigripulchritudo]
          Length = 972

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 70/187 (37%), Gaps = 18/187 (9%)

Query: 270 KRALISVQKDEAMDIYSVDL---QSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           K  ++S     A      DL   + N   RLT          +S +   ++     +G  
Sbjct: 388 KGLVVSRLNPYANGRVLADLYLFKDNNWTRLT-EQARFRKVRWSKNGHYVIASKKHDGLS 446

Query: 327 QLYVMQSN-GSDQKRISQDK-EASYFDPVWSPQGD-LIAFTKFSGEKFAI------GVMK 377
           +L+++ ++     KR+ +   +        S  G  LIA  K   + + +       +  
Sbjct: 447 ELWLVDTSMKERAKRLWKGDVDVVLGAFDVSRDGKTLIASVKRPQQGWNLESFNLGDIHS 506

Query: 378 KDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPA 435
              +    L    +   +P++    R +++S    G     +YS+DLN G+ + L     
Sbjct: 507 TQANPWTQLTHSKATENSPSFLSDNR-VMYSADYGG--IYNIYSLDLNSGKVKKLTQEVG 563

Query: 436 YASDPQW 442
            A +P+W
Sbjct: 564 GAFEPKW 570



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 81/240 (33%), Gaps = 33/240 (13%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQV-----LVTGRVIKEGKDRLRVEFRLWDVK 134
            L+S    KQ  ++ + + +    N +         LV  R+      R+  +  L+   
Sbjct: 354 QLVSPPQQKQDNSDSNWVTQDYAKNIIAMDYDEKKGLVVSRLNPYANGRVLADLYLFKDN 413

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           +  ++  +  F     W K  H +       I  +K D  S +  V  S+        L 
Sbjct: 414 NWTRLTEQARFRKVR-WSKNGHYV-------IASKKHDGLSELWLVDTSMK--ERAKRLW 463

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK--- 251
             D D             +L     S + + +  +    +    +   +     + +   
Sbjct: 464 KGDVD------------VVLGAFDVSRDGKTLIASVKRPQQGWNLESFNLGDIHSTQANP 511

Query: 252 --RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             ++ + ++   +P F S+  R + S       +IYS+DL S   ++LT  +       +
Sbjct: 512 WTQLTHSKATENSPSFLSD-NRVMYSADYGGIYNIYSLDLNSGKVKKLTQEVGGAFEPKW 570



 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 67/190 (35%), Gaps = 57/190 (30%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAPRFSSNGKRALIS 275
           R+S N   V  A+   + +  ++L+DT +    KR+  G+   ++ A   S +GK  + S
Sbjct: 428 RWSKNGHYVI-ASKKHDGLSELWLVDTSMKERAKRLWKGDVDVVLGAFDVSRDGKTLIAS 486

Query: 276 VQKDE-AMDIYSVDL------QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           V++ +   ++ S +L      Q+N   +LT++     S S+  D                
Sbjct: 487 VKRPQQGWNLESFNLGDIHSTQANPWTQLTHSKATENSPSFLSD---------------- 530

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                                         + + ++   G  + I  +  +  + + L +
Sbjct: 531 ------------------------------NRVMYSADYGGIYNIYSLDLNSGKVKKLTQ 560

Query: 389 D-SNLQAPTW 397
           +      P W
Sbjct: 561 EVGGAFEPKW 570


>gi|260461780|ref|ZP_05810026.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Mesorhizobium opportunistum WSM2075]
 gi|319785323|ref|YP_004144799.1| peptidase S9B dipeptidylpeptidase IV domain protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|259032421|gb|EEW33686.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Mesorhizobium opportunistum WSM2075]
 gi|317171211|gb|ADV14749.1| peptidase S9B dipeptidylpeptidase IV domain protein [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 773

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 74/245 (30%), Gaps = 59/245 (24%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR----------------------IGN 255
            +SP+ + +A           V  +++  D+  +                       I +
Sbjct: 226 SWSPDSRHLAAYRVRPGYKREVPYLNSSTDQLGREYSTRPYRKPGDVLPLPQPVLFDIAD 285

Query: 256 FRSMILA------------PRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERL---T 298
            R +++             P++ ++G+       +       +  VD  +     L   T
Sbjct: 286 GRQIVIDNALFSNVFELSPPQWWADGRGFTFEYNQRGHQLYRLVEVDAATGRARSLIEET 345

Query: 299 NTLFINISA------------SYS-PDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQD 344
           +  F++                Y   D  +I++ S+R+G E LY+        + +I++ 
Sbjct: 346 SETFVDYPPLGASQEGTGKIFRYDVDDGKEIIWASERDGYEHLYLFNGRTGALENQITRG 405

Query: 345 KEASYFDPVWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           +          P    I F      ++          +  DG     L  D       +S
Sbjct: 406 EWVVRRVDYIDPIKRQIWFEASGMNSEEDPYFVHAYSIGFDGKGLTALTPDPANHHIEFS 465

Query: 399 PSGRS 403
           P GR 
Sbjct: 466 PDGRY 470



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 54/410 (13%), Positives = 108/410 (26%), Gaps = 107/410 (26%)

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
           DS+     N   +P + +    GA   V     +      +  F L DV    Q      
Sbjct: 49  DSYGGLTVNVPEVPFWPN----GADAFV---YRRTSHGERQ--FMLVDVATGMQRPAFDQ 99

Query: 145 FSSPASWRKIAH-------------TISDDIYQSITGEKGDFNSR--ILFVSESVVSGII 189
               A+  + +H              +SDD  +     +    S     +   +      
Sbjct: 100 SRLAAALNRASHNLYHADHLPFDHFELSDDGRRLGFQIEDIRWSCDLASYECTNTTFDSD 159

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------DDEDILRVYLMD 243
              L  +   G N   +  + D      R SP+ + + Y  +       ++ +  V L  
Sbjct: 160 NRELWPL---GHNYVPVQNNPDS----SRLSPDGKWIVYIKHCNVFLRSEDGLRDVPLSR 212

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA---------------------- 281
              +     +           +S + +       +                         
Sbjct: 213 DGAEDNCYVVSTL-------SWSPDSRHLAAYRVRPGYKREVPYLNSSTDQLGREYSTRP 265

Query: 282 ----------MDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESDREGKEQ 327
                           D+       + N LF N+       +  D     FE ++ G + 
Sbjct: 266 YRKPGDVLPLPQPVLFDIADGRQIVIDNALFSNVFELSPPQWWADGRGFTFEYNQRGHQL 325

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
             +++ + +  +  S  +E S     + P G         G    I     D        
Sbjct: 326 YRLVEVDAATGRARSLIEETSETFVDYPPLG-----ASQEGTG-KIFRYDVD-------- 371

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                        G+ +I++ ++DG     L++    G  E  I    + 
Sbjct: 372 ------------DGKEIIWASERDGYEHLYLFN-GRTGALENQITRGEWV 408



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 53/172 (30%), Gaps = 28/172 (16%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS------ 267
           L  P++  + +   +        L   +         + +    S      +        
Sbjct: 302 LSPPQWWADGRGFTFEYNQRGHQLYRLVEVDAATGRARSLIEETSETF-VDYPPLGASQE 360

Query: 268 -----------NGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASY-SPDSS 314
                      +GK  + + ++D    +Y  + ++ A E ++T   ++     Y  P   
Sbjct: 361 GTGKIFRYDVDDGKEIIWASERDGYEHLYLFNGRTGALENQITRGEWVVRRVDYIDPIKR 420

Query: 315 QIVFESDREGKE------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           QI FE+     E        Y +  +G     ++ D   +     +SP G  
Sbjct: 421 QIWFEASGMNSEEDPYFVHAYSIGFDGKGLTALTPDP--ANHHIEFSPDGRY 470


>gi|41054505|ref|NP_955927.1| WD repeat and SOCS box-containing protein 1 [Danio rerio]
 gi|82240448|sp|Q7T2F6|WSB1_DANRE RecName: Full=WD repeat and SOCS box-containing protein 1;
           Short=WSB-1
 gi|32451637|gb|AAH54567.1| WD repeat and SOCS box-containing 1 [Danio rerio]
          Length = 423

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 72/202 (35%), Gaps = 28/202 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 152 RIKIWDVYTGKLLLNLMDHTDIVRDLTFAPDGSLVLVSASRDKTLRVWDLKDDGNMVKVL 211

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                    +++SPDSS  V  S   GK  +++   +     R  +          +SP 
Sbjct: 212 RGHQNWVYCSAFSPDSS--VLCSVGAGK-AVFLWDMDKYTLIRKLEGHHNDVVCCEFSPD 268

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +        V+  D     +L+E  +L  P                  +   
Sbjct: 269 GALLATASYDTR-----VIVWDPHTATVLLELGHLFPPPSPIFAGGANDRWVRSVAFCHD 323

Query: 401 GRSLIFSRKKDGDTGSKLYSID 422
           GR +        D   + +SID
Sbjct: 324 GRHIA---SVTDDRLVRFWSID 342



 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 77/257 (29%), Gaps = 43/257 (16%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++             + HT   DI + +T      +  ++ VS S   
Sbjct: 152 RIKIWDVYTGKLLLNL-----------MDHT---DIVRDLTFAP---DGSLVLVSASRDK 194

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+       +        V+L D   
Sbjct: 195 TL---RVWDLKDDG-NMVKVLRGHQNWVYCSAFSPDSS--VLCSVGAGKA--VFLWDMDK 246

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS---------NATERL 297
               +++    + ++   FS +G     +   D  + ++     +              +
Sbjct: 247 YTLIRKLEGHHNDVVCCEFSPDGALLA-TASYDTRVIVWDPHTATVLLELGHLFPPPSPI 305

Query: 298 TNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                 +    S ++  D   I   +D      +     +    + I            +
Sbjct: 306 FAGGANDRWVRSVAFCHDGRHIASVTD---DRLVRFWSIDEKSPQAIGPLTNG--LCCAF 360

Query: 355 SPQGDLIAFTKFSGEKF 371
           S  G +++     G   
Sbjct: 361 STDGSVLSAGSRDGSVH 377



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 54/149 (36%), Gaps = 16/149 (10%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE------DILRVYLMDT 244
            ++ + D D   +          +    FSP+   +A A+YD            V L   
Sbjct: 237 KAVFLWDMDKYTLIRKLEGHHNDVVCCEFSPDGALLATASYDTRVIVWDPHTATVLLELG 296

Query: 245 RIDRAPKRI---GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT 300
            +   P  I   G     + +  F  +G+    SV  D  +  +S+D +S      LTN 
Sbjct: 297 HLFPPPSPIFAGGANDRWVRSVAFCHDGRHIA-SVTDDRLVRFWSIDEKSPQAIGPLTNG 355

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLY 329
           L      ++S D S +   S R+G    +
Sbjct: 356 LCC----AFSTDGSVLSAGS-RDGSVHFW 379


>gi|58037455|ref|NP_083963.1| WD repeat-containing protein 38 [Mus musculus]
 gi|81917126|sp|Q9D994|WDR38_MOUSE RecName: Full=WD repeat-containing protein 38
 gi|12840673|dbj|BAB24913.1| unnamed protein product [Mus musculus]
 gi|26345848|dbj|BAC36575.1| unnamed protein product [Mus musculus]
 gi|115528885|gb|AAI15630.1| Wdr38 protein [Mus musculus]
 gi|126541165|emb|CAM46061.1| WD repeat domain 38 [Mus musculus]
          Length = 303

 Score = 57.7 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 69/187 (36%), Gaps = 13/187 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +  A+ D      VY+  T+  R   R+   R  + +  FS +G+    S  
Sbjct: 33  AFSPDGRTLLTASDDG----CVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA-SSS 87

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D ++ ++ V  +S     L        + S+SPDS Q+         ++  V +     
Sbjct: 88  SDHSIRLWDV-ARSKCLHVLKGHQRSVETVSFSPDSKQLA---SGGWDKRAIVWEVQSGR 143

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQA 394
           +  +      S     +SP  D +A   +      I  ++      S   L     N+  
Sbjct: 144 RVHLLVGHCDSIQSSDFSPTSDSLATGSWDSTV-HIWDLRASTPVVSYHNLEGHTGNISC 202

Query: 395 PTWSPSG 401
             +S SG
Sbjct: 203 LCYSASG 209



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 60/189 (31%), Gaps = 13/189 (6%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            + +           +  G     +    FS +G+  L +   D  + ++          
Sbjct: 5   PMNIRAPTRLAVGRVRFYGQHHGEVNCSAFSPDGRTLL-TASDDGCVYVWGT-KSGRLLW 62

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           RL        S  +SPD   I   S       + +     S    + +  + S     +S
Sbjct: 63  RLAGHRGPVKSCCFSPDGRLIASSSS---DHSIRLWDVARSKCLHVLKGHQRSVETVSFS 119

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDT 414
           P    +A   +        V    G +  LLV   + +Q+  +SP+  SL       G  
Sbjct: 120 PDSKQLASGGWDKRAIVWEVQS--GRRVHLLVGHCDSIQSSDFSPTSDSLA-----TGSW 172

Query: 415 GSKLYSIDL 423
            S ++  DL
Sbjct: 173 DSTVHIWDL 181



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 41/315 (13%), Positives = 92/315 (29%), Gaps = 33/315 (10%)

Query: 103 WNSLGAQV---LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKK----FFSSPASWRKIA 155
           W  +  +    L  GRV   G+    V    +    R  +        +     S R + 
Sbjct: 3   WAPMNIRAPTRLAVGRVRFYGQHHGEVNCSAFSPDGRTLLTASDDGCVYVWGTKSGRLLW 62

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
                     + G +G   S         + S    +S+ + D   +   ++     + +
Sbjct: 63  ---------RLAGHRGPVKSCCFSPDGRLIASSSSDHSIRLWDVARSKCLHVLKGHQRSV 113

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               FSP+ +++A   +D     R  + + +  R    +      I +  FS        
Sbjct: 114 ETVSFSPDSKQLASGGWDK----RAIVWEVQSGRRVHLLVGHCDSIQSSDFSPTSDSLA- 168

Query: 275 SVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +   D  + I+ +   +       L           YS         +     + + V +
Sbjct: 169 TGSWDSTVHIWDLRASTPVVSYHNLEGHTGNISCLCYSASG----LLASGSWDKTICVWK 224

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
              ++     +          +SP    +A    +G    + V      +    ++    
Sbjct: 225 PTTNNLPLQLKGHTIWVNSLAFSPDELKLA---SAGYSRTVKVWDCLTGKCLETLKGMLD 281

Query: 393 --QAPTWSPSGRSLI 405
              A  ++P G+ L+
Sbjct: 282 VAHACIFTPDGKLLV 296


>gi|289208811|ref|YP_003460877.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thioalkalivibrio sp. K90mix]
 gi|288944442|gb|ADC72141.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thioalkalivibrio sp. K90mix]
          Length = 705

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSP 399
             ++  +     SP GD +A          + +MK+     S   L  E  ++    WS 
Sbjct: 70  FFRDPQHAAGRISPDGDYVALVSAHEGAMNLHLMKRGDRLESARPLTAEPRSIMGFFWSR 129

Query: 400 SGRSLIFSRKKDGDTGSKLYSI 421
            GR LIF R +DGD   +L  I
Sbjct: 130 DGRHLIFVRDRDGDENLELRVI 151



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 51/143 (35%), Gaps = 14/143 (9%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISASYSPDSSQIVFE 319
           A R S +G    +    + AM+++ +       +   LT      +   +S D   ++F 
Sbjct: 78  AGRISPDGDYVALVSAHEGAMNLHLMKRGDRLESARPLTAEPRSIMGFFWSRDGRHLIFV 137

Query: 320 SDREGKEQLYV--------MQSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKFS 367
            DR+G E L +        +  +G  + R     +         P  +P+   +   +  
Sbjct: 138 RDRDGDENLELRVIALKDAVGQDGIPESRHLAGGDGVQARVQHVPRSTPEYIFVGLNERD 197

Query: 368 GEKFAIGVMKKDGSQERLLVEDS 390
                +  +  +  ++  + +++
Sbjct: 198 PRLHDVYRVALETGEKTRVAKNT 220



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 74/247 (29%), Gaps = 18/247 (7%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           RD      R SP+   VA  +  +  +    +       + + +      I+   +S +G
Sbjct: 72  RDPQHAAGRISPDGDYVALVSAHEGAMNLHLMKRGDRLESARPLTAEPRSIMGFFWSRDG 131

Query: 270 KRALISVQKDEAMD-----IYSVDLQSN----ATERLTNTLFINISASYSPDSS-QIVFE 319
           +  +    +D   +     I   D         +  L     +     + P S+ + +F 
Sbjct: 132 RHLIFVRDRDGDENLELRVIALKDAVGQDGIPESRHLAGGDGVQARVQHVPRSTPEYIFV 191

Query: 320 SDREGKEQL---YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              E   +L   Y +     ++ R++++            +      T        + V 
Sbjct: 192 GLNERDPRLHDVYRVALETGEKTRVAKNTAEIEGWGFHEGELRKAVRTTDDAGTEILRVQ 251

Query: 377 KKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTG--SKLYSID-LNGRNETLIN 432
            +D  +           +   + P G  L + R   GD     +L   D   G  E +  
Sbjct: 252 SQDEFESIYTCAFGETCSIANFHPDGERL-YMRTNAGDERDLIELVLFDPATGEEERVHR 310

Query: 433 TPAYASD 439
            P    D
Sbjct: 311 DPEGEVD 317


>gi|58580021|ref|YP_199037.1| dipeptidyl peptidase IV [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84622018|ref|YP_449390.1| dipeptidyl peptidase IV [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|58424615|gb|AAW73652.1| dipeptidyl peptidase IV [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84365958|dbj|BAE67116.1| dipeptidyl peptidase IV [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 745

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 62/192 (32%), Gaps = 52/192 (27%)

Query: 263 PRFSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNT----LFINISA-------- 307
           P+ + +G R      KD     +D++  D+ S  T  L ++      I + +        
Sbjct: 42  PKVAPDGSRVTFLRGKDGDRNQLDLWEYDIASGQTRLLVDSKVVLPGIEVLSDVEKARRE 101

Query: 308 -------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                         ++PD+  ++F     G+  LY ++  G+   R     E    D   
Sbjct: 102 RQRIAALTGIVDYQWAPDAHALLFPL--GGELYLYDLRKTGAAAVRKLTHGEGFATDAKL 159

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQAPT 396
           SP+G  ++F +       + V+         L  D                         
Sbjct: 160 SPKGGFVSFVRER----NVWVIDLASGNALQLTHDGSETIGNGMAEFVADEEMDRHTGYW 215

Query: 397 WSPSGRSLIFSR 408
           W+P   ++ F+R
Sbjct: 216 WAPDDSAIAFAR 227



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/315 (15%), Positives = 96/315 (30%), Gaps = 69/315 (21%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--- 217
              + +T  +G      L      VS + + ++ V+D    N   LT    + +      
Sbjct: 142 AAVRKLTHGEGFATDAKLSPKGGFVSFVRERNVWVIDLASGNALQLTHDGSETIGNGMAE 201

Query: 218 -------------RFSPNQQKVAYATYDDEDIL---RVYLMDTRIDRAPKRIGNFRSMIL 261
                         ++P+   +A+A  D+  +    R  +     +   +R        +
Sbjct: 202 FVADEEMDRHTGYWWAPDDSAIAFARIDESHVPVQKRPEVYADHTEVISQRYPQAGQPNV 261

Query: 262 APRF---SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           A +    +   K A   +   +  DIY   +     +RLT           S D   +  
Sbjct: 262 AVQLGVIAPRAKAAARWIDLGKNPDIYLARVDWRDAQRLTFQRQ-------SRDQKTL-- 312

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP---------QGDLIAFTKFSGE 369
                  E +    ++G+ +  I++        P W P          G  + +      
Sbjct: 313 -------ELIETTLASGAQRTLITE------TSPTWVPLSNDLRFLKDGRFL-WNSERSG 358

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG--------RSLIFSRKKDGDTGSKLYSI 421
              + +  +DG     L   +      W   G          + F+  KDG T + +Y++
Sbjct: 359 YAHVYLASEDGRTLTSLTSGN------WVVDGLLAVDETAGMVYFAASKDGPTQTHIYAV 412

Query: 422 DL-NGRNETLINTPA 435
            L  G  E    T  
Sbjct: 413 PLAGGAIEKRSVTNG 427



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 65/202 (32%), Gaps = 55/202 (27%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-------- 263
             L +P+ +P+  +V +    D D  ++ L +  I     R+    S ++ P        
Sbjct: 37  PTLMKPKVAPDGSRVTFLRGKDGDRNQLDLWEYDIASGQTRLL-VDSKVVLPGIEVLSDV 95

Query: 264 -------------------RFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTL 301
                              +++ +    L  +      ++Y  DL+        +LT+  
Sbjct: 96  EKARRERQRIAALTGIVDYQWAPDAHALLFPL----GGELYLYDLRKTGAAAVRKLTHGE 151

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-------- 353
                A  SP    + F  +R     ++V+     +  +++ D   +  + +        
Sbjct: 152 GFATDAKLSPKGGFVSFVRER----NVWVIDLASGNALQLTHDGSETIGNGMAEFVADEE 207

Query: 354 --------WSPQGDLIAFTKFS 367
                   W+P    IAF +  
Sbjct: 208 MDRHTGYWWAPDDSAIAFARID 229


>gi|282865401|ref|ZP_06274453.1| peptidase S9B dipeptidylpeptidase IV domain protein [Streptomyces
           sp. ACTE]
 gi|282559874|gb|EFB65424.1| peptidase S9B dipeptidylpeptidase IV domain protein [Streptomyces
           sp. ACTE]
          Length = 707

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 76/237 (32%), Gaps = 41/237 (17%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------- 264
             + +PR SP+ + +AY       I+ V     R    P+       +            
Sbjct: 132 GPVLDPRPSPDGRHIAYVAGGALRIVGVDGEGDRAIAEPEDEHTTYGLAEFVAAEEMGRH 191

Query: 265 ----FSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQI 316
               +S +  R L++   D A+  + +    +  S   E       I   A+ +PD+   
Sbjct: 192 RGFWWSPDSDRLLVARADDGAVRRWWIADPANPGSRPAE-------IAYPAAGTPDAEVR 244

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV- 375
           +F +D  G     V            + +        WS  G  +   +   ++  + + 
Sbjct: 245 LFLTDLGGARTEVVWD----------RTRFPYLARVHWSSAGTPLLLVQARDQRGQLYLA 294

Query: 376 MKKDGSQERLLVEDSN-------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +  +    R +  D +          P W+P GR L+    + G     +    L G
Sbjct: 295 VDTETGATRTVHVDEDPVWLELFAGVPAWAPDGR-LVRVADEGGARVLSVGDRPLTG 350



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 52/172 (30%), Gaps = 31/172 (18%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---EQLYVMQSNGSDQKRIS 342
           S   Q   T+R T  L    S + SPD +++VF     G     +L V+ +   ++   +
Sbjct: 7   SFPRQHARTQRFT--LGAPRSFTVSPDGTRVVFLRSSSGTDRTNRLMVLDTRTGEESVAA 64

Query: 343 QDKEASYF-DPVWSPQGDLIAFTKFSGE-------------------KFAIGVMKKDGSQ 382
                        SPQ          G                       + V +     
Sbjct: 65  DPGALLDGSAERLSPQERARRERTREGSAGIVGYAVDAAAELAAFALSGTVYVAELGAGT 124

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            R L     +  P  SP GR + +        G  L  + ++G  +  I  P
Sbjct: 125 ARALPVTGPVLDPRPSPDGRHIAYVA------GGALRIVGVDGEGDRAIAEP 170



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 32/253 (12%), Positives = 65/253 (25%), Gaps = 60/253 (23%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSN------ 268
             SP+  +V +            LM        + +      +L   A R S        
Sbjct: 27  TVSPDGTRVVFLRSSSGTDRTNRLMVLDTRTGEESVAADPGALLDGSAERLSPQERARRE 86

Query: 269 ----GKRALI---------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
               G   ++               +  +Y  +L +     L  T    +    SPD   
Sbjct: 87  RTREGSAGIVGYAVDAAAELAAFALSGTVYVAELGAGTARALPVT-GPVLDPRPSPDGRH 145

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKE----------------ASYFDPVWSPQGD 359
           I + +       L ++  +G   + I++ ++                  +    WSP  D
Sbjct: 146 IAYVA----GGALRIVGVDGEGDRAIAEPEDEHTTYGLAEFVAAEEMGRHRGFWWSPDSD 201

Query: 360 LIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +   +          +        R          P        + +      D   +L
Sbjct: 202 RLLVARADDGAVRRWWIADPANPGSR----------PA------EIAYPAAGTPDAEVRL 245

Query: 419 YSIDLNGRNETLI 431
           +  DL G    ++
Sbjct: 246 FLTDLGGARTEVV 258


>gi|332304709|ref|YP_004432560.1| peptidase S9B dipeptidylpeptidase IV domain protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332172038|gb|AEE21292.1| peptidase S9B dipeptidylpeptidase IV domain protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 735

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 76/224 (33%), Gaps = 42/224 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------------- 264
            +SP++ K+A+   D+  +  +   +   D   K I         P              
Sbjct: 210 WWSPDESKIAFTQVDESPVDEITRSEIYADS-IKMINQRYPSAGTPNVTVKLAVKDLASG 268

Query: 265 -------------------FSSNGKRALISVQKDE--AMDIYSVDLQSNA----TERLTN 299
                              +  + +      Q  +   +++ + + QS         L+N
Sbjct: 269 NTQWVDLGKEQDIYLARVNWMKDSQTLTYQWQSRDQKTLELRAFNSQSGKQNTLLTELSN 328

Query: 300 TLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           T    N    +  D    ++ S++ G + LY+ +++G+  ++++Q           + + 
Sbjct: 329 TWVNLNDDLHFLNDQKHFIWASEKSGFKHLYLYKNDGTLVRQLTQGDWVVDEIEAINEKQ 388

Query: 359 DLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            LI FT  +    +  I  +   G   + L + S    P++S  
Sbjct: 389 GLIYFTGRANTPLEQHIYTVSIAGGDIKKLSQRSGTHVPSFSDD 432



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 74/232 (31%), Gaps = 62/232 (26%)

Query: 251 KRIGNFRSMILAPR----FSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           +RI +  ++  +       S +GKR           E  D++  ++ +  T+ L N+  +
Sbjct: 25  ERIFDSPALEGSSANNVKVSPDGKRVTFLQGKTTDYERYDLWEYNIATGNTQMLFNSDDL 84

Query: 304 NISA------------------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +                            +S D   ++F     G    + +   G ++ 
Sbjct: 85  HSGPEALSDEEKARRERMRLSGSGIVNYFWSDDGKALLFPL--AGDAYYFRL---GDEKA 139

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--------- 390
           +   D +A   D  +SP+ + I++ +       + +       E  L  D          
Sbjct: 140 QKILDTDAFETDIRFSPKANFISYVREQ----NLFIKNIKTQVETQLTFDGKGTIKNAMA 195

Query: 391 ---------NLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSIDLNGRNET 429
                     +    WSP    + F+       D  T S++Y+  +   N+ 
Sbjct: 196 EFVAQEEMGRMTGYWWSPDESKIAFTQVDESPVDEITRSEIYADSIKMINQR 247



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 49/189 (25%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPR-------------- 264
           SP+ ++V +      D  R  L +  I     + + N   +   P               
Sbjct: 44  SPDGKRVTFLQGKTTDYERYDLWEYNIATGNTQMLFNSDDLHSGPEALSDEEKARRERMR 103

Query: 265 ----------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                     +S +GK  L  +  D     Y   L     +++ +T        +SP ++
Sbjct: 104 LSGSGIVNYFWSDDGKALLFPLAGD----AYYFRLGDEKAQKILDTDAFETDIRFSPKAN 159

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQG 358
            I +  +    + L++       + +++ D + +  + +                WSP  
Sbjct: 160 FISYVRE----QNLFIKNIKTQVETQLTFDGKGTIKNAMAEFVAQEEMGRMTGYWWSPDE 215

Query: 359 DLIAFTKFS 367
             IAFT+  
Sbjct: 216 SKIAFTQVD 224


>gi|271500477|ref|YP_003333502.1| oligogalacturonide lyase [Dickeya dadantii Ech586]
 gi|270344032|gb|ACZ76797.1| Oligogalacturonide lyase [Dickeya dadantii Ech586]
          Length = 388

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 84/245 (34%), Gaps = 33/245 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
               +K+++  +  +D +    +   +   P  +   R+      FS++G + L     D
Sbjct: 1   MAKGKKLSFTFHTYQDSVTGTEV---VRLTPPDVICHRNYFYQKCFSNDGSKLLFGGAFD 57

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + Y +DL++    +LT     N    + SP+   + +  +      L  +  N  ++
Sbjct: 58  GPWNYYLLDLKTQQATQLTEGTGDNTFGGFLSPNDDALYYVKN---VRNLMRVDLNTLEE 114

Query: 339 KRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFA--------------------IGVM 376
             I Q  +       W    D   +   +   E +                     I + 
Sbjct: 115 TNIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFYFTNPCCRLIRID 174

Query: 377 KKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLI--N 432
            K G    +L E   L  P + P    ++ F  +   D   ++++ I+ +G N   +  +
Sbjct: 175 LKTGEATTILQEKQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGTNMRKVKEH 234

Query: 433 TPAYA 437
            P  +
Sbjct: 235 APGES 239



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 62/181 (34%), Gaps = 28/181 (15%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 ++   +  ++ DG N+R +   +  +      + PN   +AY +Y      R  
Sbjct: 207 HEGPHDLVDARMWFINEDGTNMRKVKEHAPGESCTHEFWVPNGSALAYVSYLKGSTNRFI 266

Query: 241 LMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRAL-------ISVQKDEAMDI------YS 286
                +    +++        L   +  +G   +       + V+ D    I      Y 
Sbjct: 267 CSVDPVTLENRQLTEMPPCSHLMSNY--DGTLMVGDGCNAPVDVKDDGGYKIENDPFLYV 324

Query: 287 VDLQSNATERLTNTL-FINI----------SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            ++++    ++        +            S++PD   I+F SD +GK  LY+ +   
Sbjct: 325 FNMKTGKHFQVAQHNTSWEVLEGDRQVTHPHPSFTPDDKHILFTSDVDGKPALYLAKVPD 384

Query: 336 S 336
           S
Sbjct: 385 S 385



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 84/253 (33%), Gaps = 35/253 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  FS +  K+ +     +     YL+D +  +A +              S N   
Sbjct: 36  NYFYQKCFSNDGSKLLFGG-AFDGPWNYYLLDLKTQQATQLTEGTGDNTFGGFLSPNDDA 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASY--SPDSSQIV----------- 317
                      ++  VDL +     +       +   ++  + D +++V           
Sbjct: 95  LYYVKNV---RNLMRVDLNTLEETNIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKP 151

Query: 318 ------FESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
                 F+         +L  +     +   I Q+K+     P++ P   + +AF     
Sbjct: 152 LTDWKKFQEFYFTNPCCRLIRIDLKTGEATTILQEKQW-LGHPIYRPGDDNTVAFCHEGP 210

Query: 369 EKF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DG+  R + E +  ++ T   W P+G +L +     G T   + S+D
Sbjct: 211 HDLVDARMWFINEDGTNMRKVKEHAPGESCTHEFWVPNGSALAYVSYLKGSTNRFICSVD 270

Query: 423 -LNGRNETLINTP 434
            +   N  L   P
Sbjct: 271 PVTLENRQLTEMP 283



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/231 (8%), Positives = 63/231 (27%), Gaps = 43/231 (18%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MD 283
           +  +   +     +           I   +  +  P +   +        +         
Sbjct: 158 FQEFYFTNPCCRLIRIDLKTGEATTILQEKQWLGHPIYRPGDDNTVAFCHEGPHDLVDAR 217

Query: 284 IYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQK 339
           ++ ++       ++             + P+ S + + S  +G     +  +     + +
Sbjct: 218 MWFINEDGTNMRKVKEHAPGESCTHEFWVPNGSALAYVSYLKGSTNRFICSVDPVTLENR 277

Query: 340 RISQDKEASYFDPVWSPQGDLIA--------------------------FTKFSGEKFAI 373
           ++++    S+    +   G L+                           F   +G+ F +
Sbjct: 278 QLTEMPPCSHLMSNY--DGTLMVGDGCNAPVDVKDDGGYKIENDPFLYVFNMKTGKHFQV 335

Query: 374 GVMKKD---GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                       +R +        P+++P  + ++F+   DG     L  +
Sbjct: 336 AQHNTSWEVLEGDRQVTHP----HPSFTPDDKHILFTSDVDGKPALYLAKV 382


>gi|168700364|ref|ZP_02732641.1| NB-ARC domain protein [Gemmata obscuriglobus UQM 2246]
          Length = 1037

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 84/253 (33%), Gaps = 26/253 (10%)

Query: 167 TGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           T + G   + ++F+  +  V+      + V D     +          +     SP+   
Sbjct: 473 TIDAGAAMTALVFLDGNRLVASGGDKVVKVWDLAAKKVLKELSGHTLAVLTVAASPDGNL 532

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           V   + D             + +   R       + A     +GKR  + +       + 
Sbjct: 533 VVSGSADASVRGFAPDSGKEVWKWSARKAAVAVAVRA-----DGKRVAVGIADGG---LS 584

Query: 286 SVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +D+   A   L+            ++SPD +++      +G  +++ + ++G+  + + 
Sbjct: 585 VLDVSGPAPRELSTLAAHTAGTTCVAFSPDGNRLA-SVGGDGALRVWSVGTDGALTQLVR 643

Query: 343 QDKE--------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
            D          A      ++P G  +A    +G    + V       E   +       
Sbjct: 644 FDGPVTTTGTAAAPLSTVAFAPDGRYVA---TAGADAVVRVWDIQTKSEARGLRGHTDWV 700

Query: 394 -APTWSPSGRSLI 405
            +  +SP+G+SL+
Sbjct: 701 TSVAFSPNGQSLV 713



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/361 (14%), Positives = 103/361 (28%), Gaps = 87/361 (24%)

Query: 115 RVIKEGKDRLRVEF------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
           R+      +  V        R+WDV   K +  + F         +A             
Sbjct: 357 RLAVTADGKTLVTCGEDRTVRVWDVASGKAL--RSFQGHMTKAIAVA------------- 401

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            +GD         + V S     ++ V D +  +         + L+    SP+ + VA 
Sbjct: 402 VRGDG--------QQVASASEDGAVRVWDLNATDEHRALKDAKESLWAVAASPDGKWVAA 453

Query: 229 ATYDD------------------------------------EDILRVYLMDTRIDRAPKR 252
           A  D                                          V + D    +  K 
Sbjct: 454 AGADRSIRVYSMEAGKLEATIDAGAAMTALVFLDGNRLVASGGDKVVKVWDLAAKKVLKE 513

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      +L    S +G   ++S   D ++  ++ D       + +        A    D
Sbjct: 514 LSGHTLAVLTVAASPDGN-LVVSGSADASVRGFAPD-SGKEVWKWSARKAAVAVAV-RAD 570

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEK 370
             ++       G   L V+  +G   + +S      A      +SP G+ +A     G  
Sbjct: 571 GKRVAVGIADGG---LSVLDVSGPAPRELSTLAAHTAGTTCVAFSPDGNRLASVGGDG-A 626

Query: 371 FAIGVMKKDGSQERL------LVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYS 420
             +  +  DG+  +L      +       AP     ++P GR +        D   +++ 
Sbjct: 627 LRVWSVGTDGALTQLVRFDGPVTTTGTAAAPLSTVAFAPDGRYVA---TAGADAVVRVWD 683

Query: 421 I 421
           I
Sbjct: 684 I 684



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 85/259 (32%), Gaps = 22/259 (8%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     L V++ D     + + SR+  +    FSPN + VA    D+   + VY+   + 
Sbjct: 232 GGDDFILRVIESDSGKEVFKSNSRNARIERVAFSPNGKLVALG--DNNSQVAVYVPRGKG 289

Query: 247 DRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-------ATERLT 298
           ++    + G  R  +    F+++          ++A      D                 
Sbjct: 290 NQLAMSVQGVDRGGVFGVAFAADSGSVFTCGLDEKARLTAGPDPDGKSAGNTATKLREFV 349

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                    + + D   +V   +      + V         R  Q              G
Sbjct: 350 GHSGAVNRLAVTADGKTLVTCGE---DRTVRVWDVASGKALRSFQGHMTKAIAVAVRGDG 406

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGS 416
             +A     G   A+ V   + + E   ++D+  +L A   SP G+ +        D   
Sbjct: 407 QQVASASEDG---AVRVWDLNATDEHRALKDAKESLWAVAASPDGKWVA---AAGADRSI 460

Query: 417 KLYSIDLNGRNETLINTPA 435
           ++YS++  G+ E  I+  A
Sbjct: 461 RVYSMEA-GKLEATIDAGA 478



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 13/125 (10%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +    GD   R+  V              ++  DG      T +    L    F+P+ +
Sbjct: 617 RLASVGGDGALRVWSVGTDGALTQ------LVRFDG--PVTTTGTAAAPLSTVAFAPDGR 668

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-LISVQKDEAMD 283
            VA A  D      V + D +     + +      + +  FS NG+    ++ +KD  + 
Sbjct: 669 YVATAGADA----VVRVWDIQTKSEARGLRGHTDWVTSVAFSPNGQSLVAVAAEKDNTLR 724

Query: 284 IYSVD 288
           I+ + 
Sbjct: 725 IFELP 729


>gi|221134580|ref|ZP_03560885.1| Dipeptidyl peptidase IV [Glaciecola sp. HTCC2999]
          Length = 839

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 67/176 (38%), Gaps = 12/176 (6%)

Query: 272 ALISVQKDEAMDIYSVDLQSNAT---ERLTNTLFINISAS---YSPDSSQIVFESDREGK 325
            ++    ++   I +VD    +     RL++  +IN + +   +  + + + F S+  G 
Sbjct: 403 IMLEAWDNKDRWIATVDFDKKSLVTQHRLSDEAWINYAFNRFGWLKNEASLYFLSEHTGF 462

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQE 383
            QLYV   NG + + ++Q +         SP G  I +   K     + I  +       
Sbjct: 463 SQLYVKPVNG-ELRALTQGEFVVDSISQ-SPDGQYIYYKANKKHPGIYEIYRVDTTDGAS 520

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
             L + + +     SP G  L+ +         +L+   +  RN+       + SD
Sbjct: 521 EALTDLNGMTDYVLSPDGSQLLLTHSSMNRP-PELFLASVE-RNKPPQALSQFVSD 574



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 72/213 (33%), Gaps = 22/213 (10%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI-LFEPR 218
           DD+ +++  E         + +  +   I   S            Y   S +Q+ +    
Sbjct: 352 DDVLETVKRENAQARGDT-YQTNRLPRDITLMSSWYWS---EPPIYWHTSENQVGIMLEA 407

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTR--IDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           +    + +A   +D + ++  + +     I+ A  R G  ++                  
Sbjct: 408 WDNKDRWIATVDFDKKSLVTQHRLSDEAWINYAFNRFGWLKNEAS----------LYFLS 457

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--REGKEQLYVMQSN 334
           +      +Y   +       LT   F+  S S SPD   I ++++    G  ++Y + + 
Sbjct: 458 EHTGFSQLYVKPVN-GELRALTQGEFVVDSISQSPDGQYIYYKANKKHPGIYEIYRVDTT 516

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
               + ++     + +  V SP G  +  T  S
Sbjct: 517 DGASEALTDLNGMTDY--VLSPDGSQLLLTHSS 547


>gi|158318813|ref|YP_001511321.1| WD-40 repeat-containing protein [Frankia sp. EAN1pec]
 gi|158114218|gb|ABW16415.1| WD-40 repeat protein [Frankia sp. EAN1pec]
          Length = 1265

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 41/219 (18%), Positives = 74/219 (33%), Gaps = 25/219 (11%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS---MILAPRFSSNGKRALI 274
             F P+ + +A          RV L D    R P  I  F      + + RFS +G+  ++
Sbjct: 973  AFHPDGRILA-----VGTAKRVCLYDITDPRRPFMITAFEGPAGGVFSLRFSPDGRTLVL 1027

Query: 275  SVQKDEAMDIYSVDLQS------NATERLTN---TLFINISASYSPDSSQIVFESDREGK 325
                      +S  L++          RL +            +S D   +   +DR   
Sbjct: 1028 GGLGSSPAPAFSASLETWDVRDPRHPARLASTVAHRGSVRDIQFSEDGHVMASVADR--T 1085

Query: 326  EQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQ 382
             QL+ +        R +  D   +     ++P G  +A          + I    +    
Sbjct: 1086 VQLWDVSDPRRIAARATLPDFPGAALRAAFAPDGRTLAVGGGGPYATLWNITDPARPTRT 1145

Query: 383  ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              L    S +   T+SP GR+L+      GD   +++ +
Sbjct: 1146 ASLPGHVSEVNTVTFSPDGRTLV---TGSGDNSVRVWDV 1181



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 65/215 (30%), Gaps = 31/215 (14%)

Query: 111  LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
            LV G +              WDV+D +                +AH  S    Q    E 
Sbjct: 1025 LVLGGLGSSPAPAFSASLETWDVRDPRHPARLAST--------VAHRGSVRDIQ--FSED 1074

Query: 171  GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            G   + +   +  +        +          R   P          F+P+ + +A   
Sbjct: 1075 GHVMASVADRTVQLWDVSDPRRIA--------ARATLPDFPGAALRAAFAPDGRTLAV-- 1124

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSNGKRALISVQKDEAMDIYSV 287
                      L +      P R  +    +       FS +G+  + +   D ++ ++ V
Sbjct: 1125 --GGGGPYATLWNITDPARPTRTASLPGHVSEVNTVTFSPDGRTLV-TGSGDNSVRVWDV 1181

Query: 288  DLQSNA--TERLTNTLFINIS---ASYSPDSSQIV 317
               SN    ERL+ +   N      ++S D S +V
Sbjct: 1182 RRPSNPRLVERLSRSAGTNSGIGTVAFSRDGSTLV 1216



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 60/193 (31%), Gaps = 17/193 (8%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FS +   +A        +  V   D R   A   + +F    L   F+ +G+   +    
Sbjct: 1071 FSEDGHVMASVADRTVQLWDV--SDPRRIAARATLPDFPGAALRAAFAPDGRTLAVGGGG 1128

Query: 279  DEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              A     +   +   T  L   +    + ++SPD   +V  S   G   + V       
Sbjct: 1129 PYATLWNITDPARPTRTASLPGHVSEVNTVTFSPDGRTLVTGS---GDNSVRVWDVRRPS 1185

Query: 338  QKRI------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS- 390
              R+      S    +      +S  G  +    F+ E  A+  +  D   +R+  +   
Sbjct: 1186 NPRLVERLSRSAGTNSGIGTVAFSRDGSTLVGVVFT-EPGALWDLDVDRVAQRICAQAGV 1244

Query: 391  ---NLQAPTWSPS 400
                 +   + P 
Sbjct: 1245 GITRDEWARFLPD 1257



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 57/209 (27%), Gaps = 23/209 (11%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            P  +     VAY T +  +     L         P R    R+ +    +S NGK    
Sbjct: 539 NPAIAAQLSLVAYRTANTPEARGSVLSSFNGGSGVPTRYLFHRNAVGTVTYSPNGKLIA- 597

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------EGKEQL 328
           +   D    I+        +  L            S     + F  D        G    
Sbjct: 598 TGSDDWTAAIWDA-ADPRRSTPLAVLPGPQDGGH-SRAVKSVAFSRDSRLLATGSGDRTA 655

Query: 329 YVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            +   +   + R+     +     +   +SP  D +A   + G    I  + + G     
Sbjct: 656 KIWDVSTPSRPRLLATLPETTGDVYGLAFSPVADRLAVAGY-GNSARIYDVSEPGRPAVQ 714

Query: 386 LVEDSNLQAP---------TWSPSGRSLI 405
                N + P          +SP G  L 
Sbjct: 715 GALLINGETPLHQGPIDTLAFSPDGYILA 743



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 61/214 (28%), Gaps = 30/214 (14%)

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTLF 302
            T +      + +   +  +  F  +G+   +      A  +   D+        +T    
Sbjct: 953  TSLSVITDALADEYDLTTSAAFHPDGRILAV----GTAKRVCLYDITDPRRPFMITAFEG 1008

Query: 303  INI---SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK------RI--SQDKEASYFD 351
                  S  +SPD   +V           +       D +      R+  +     S  D
Sbjct: 1009 PAGGVFSLRFSPDGRTLVLGGLGSSPAPAFSASLETWDVRDPRHPARLASTVAHRGSVRD 1068

Query: 352  PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------TWSPSGRSLI 405
              +S  G        +     +  +       R+    +    P       ++P GR+L 
Sbjct: 1069 IQFSEDGH--VMASVADRTVQLWDVS---DPRRIAARATLPDFPGAALRAAFAPDGRTLA 1123

Query: 406  FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                  G   + L++I    R     + P + S+
Sbjct: 1124 VG---GGGPYATLWNITDPARPTRTASLPGHVSE 1154



 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 67/223 (30%), Gaps = 44/223 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-----FRSMILAPRFSSNGKRA 272
            FSP   ++A A Y +   +       R       + N      +  I    FS +G   
Sbjct: 683 AFSPVADRLAVAGYGNSARIYDVSEPGRPAVQGALLINGETPLHQGPIDTLAFSPDGYIL 742

Query: 273 L--------ISVQKDEAMDIYSVDL-----QSNATERLTNTLFINISASYSPDSSQIVFE 319
                    +      A+DI  VDL          +R+     +    ++ PD    V+ 
Sbjct: 743 AAGDEAASTVLWYVGPALDIMPVDLLNVPDDDPTADRVGTIRAV----AFGPDGRS-VYT 797

Query: 320 SDREGKEQLYVMQSNGSDQKRISQD-----KEASYFDPVWSPQGDLIAFTKFSGEKFAI- 373
           +   G+ +++    +G D   ++                 +P G L+A          + 
Sbjct: 798 AGVAGRIRVF----SGPDLLHLTHTATMGVGNGPMAALAVAPTGGLVAVGGNLFSGVPLF 853

Query: 374 --------GVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLI 405
                    V+       R L    E +      +SP GR L 
Sbjct: 854 DPAAATQQAVLSDPSDGARALTFLNEGTVTWTVAFSPDGRHLA 896


>gi|295131981|ref|YP_003582657.1| peptidase S9 prolyl oligopeptidase [Zunongwangia profunda SM-A87]
 gi|294979996|gb|ADF50461.1| peptidase S9 prolyl oligopeptidase [Zunongwangia profunda SM-A87]
          Length = 640

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 53/133 (39%), Gaps = 16/133 (12%)

Query: 309 YSPDSSQIVFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +SPD   I + S +             +Y       + + I+++ +    +P +S  G  
Sbjct: 184 WSPDGKSIYYVSKKLKGKDYAISTNTDIYKYNLETKETENITEENKGYDTNPAFSSGG-A 242

Query: 361 IAFTKFSGEKFAIG---VMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +A+ +   + +      ++  +   ++ L    D  + +  W+ +G  + F+   DG   
Sbjct: 243 LAWLQMKADGYEADKNDIVVLENGVKQNLTANWDGTVNSFLWAKNGEEIYFTAPVDGT-- 300

Query: 416 SKLYSIDLNGRNE 428
            +L+ ++  G+  
Sbjct: 301 IQLFKVNYPGKKR 313



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 10/127 (7%)

Query: 219 FSPNQQKVAYATYDDEDILR-------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +SP+ + + Y +   +           +Y  +             +     P FSS G  
Sbjct: 184 WSPDGKSIYYVSKKLKGKDYAISTNTDIYKYNLETKETENITEENKGYDTNPAFSSGGAL 243

Query: 272 ALISVQKDE--AMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQL 328
           A + ++ D   A     V L++   + LT N      S  ++ +  +I F +  +G  QL
Sbjct: 244 AWLQMKADGYEADKNDIVVLENGVKQNLTANWDGTVNSFLWAKNGEEIYFTAPVDGTIQL 303

Query: 329 YVMQSNG 335
           + +   G
Sbjct: 304 FKVNYPG 310


>gi|84996473|ref|XP_952958.1| guanine-nucleotide binding protein [Theileria annulata strain
           Ankara]
 gi|65303955|emb|CAI76334.1| guanine-nucleotide binding protein, putative [Theileria annulata]
          Length = 331

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 80/233 (34%), Gaps = 19/233 (8%)

Query: 181 SESVVSGIIKNSLCVMDR-----DGAN--IRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             +++S      L + +      DG     +       Q + +   S +       ++D 
Sbjct: 39  VNTIISASRDKRLMIWEMFDDEVDGQVGVAKRALTGHSQTVQDVSMSSDGLFALSGSWDG 98

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L D     + +        + +  FS + ++  IS  +D+ + +++   +   
Sbjct: 99  ----TLRLWDLVKACSVRVFNGHTKDVNSVAFSPDNRQI-ISGSRDKTIKLWNTLAECKY 153

Query: 294 TERLTNTLFINISA--SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           T  +TN+   +  +   +SP   + +F S     + + V        K      E   + 
Sbjct: 154 T--ITNSTHTDWVSCVRFSPSGKEPIFVSG-GWDKLIKVWDLRTCQLKHTLYGHEGVVYS 210

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
              SP G L A +        +  MK+  S   LL   S + A  +SP    L
Sbjct: 211 VSISPDGSLCA-SGGKDGVARLWDMKEANS-LHLLDAGSTINALCFSPCNYWL 261



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 47/252 (18%), Positives = 91/252 (36%), Gaps = 32/252 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    +L + D   A    +     + +    FSP+ +++   + D      + L +T 
Sbjct: 93  SGSWDGTLRLWDLVKACSVRVFNGHTKDVNSVAFSPDNRQIISGSRDK----TIKLWNTL 148

Query: 246 ID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATER-LTNTLF 302
            + +           +   RFS +GK  +          +  V DL++   +  L     
Sbjct: 149 AECKYTITNSTHTDWVSCVRFSPSGKEPIFVS--GGWDKLIKVWDLRTCQLKHTLYGHEG 206

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +  S S SPD S       ++G  +L+ M+   S       D  ++     +SP    + 
Sbjct: 207 VVYSVSISPDGSLCA-SGGKDGVARLWDMKEANSLH---LLDAGSTINALCFSPCNYWL- 261

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ----------APTWSPSGRSLIFSRKKDG 412
               + +   I     D   + +L E +N +          +  WSP GR ++++   DG
Sbjct: 262 -CAATDKAIKIW----DLENKNILAEINNDRTKKVGLPWCVSLCWSPDGR-VLYAGSTDG 315

Query: 413 DTGSKLYSIDLN 424
                +Y +  N
Sbjct: 316 --NIYVYQVSRN 325



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 84/261 (32%), Gaps = 37/261 (14%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                   RLWD+     +  + F         +A   S D             +R +  
Sbjct: 93  SGSWDGTLRLWDLVKACSV--RVFNGHTKDVNSVA--FSPD-------------NRQIIS 135

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                +  + N+L        N    +   D +    RFSP+ ++  + +   + +++V+
Sbjct: 136 GSRDKTIKLWNTLAECKYTITN----STHTDWVSCV-RFSPSGKEPIFVSGGWDKLIKVW 190

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             D R  +    +     ++ +   S +G     S  KD    ++ +  ++N+   L   
Sbjct: 191 --DLRTCQLKHTLYGHEGVVYSVSISPDGSLCA-SGGKDGVARLWDM-KEANSLHLLDAG 246

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK------RISQDKEASYFDPVW 354
             IN    +SP +  +   +D+     + +      +        R  +          W
Sbjct: 247 STINA-LCFSPCNYWLCAATDKA----IKIWDLENKNILAEINNDRTKKVGLPWCVSLCW 301

Query: 355 SPQGDLIAFTKFSGEKFAIGV 375
           SP G ++      G  +   V
Sbjct: 302 SPDGRVLYAGSTDGNIYVYQV 322


>gi|330919968|ref|XP_003298836.1| hypothetical protein PTT_09656 [Pyrenophora teres f. teres 0-1]
 gi|311327807|gb|EFQ93082.1| hypothetical protein PTT_09656 [Pyrenophora teres f. teres 0-1]
          Length = 621

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 27/252 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +  L   RD  +    +SP+  K+       E+  R++  D +     + I +F      
Sbjct: 348 LHQLDEHRDSGVTHLAWSPDDTKIVTCCSQPENSARIW--DVKTGTCIQCISDFTYPCTT 405

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF----INISASYSPDSSQIVF 318
             +  +G R +I   +D+ M     DL  +   + +N        ++  + SPD  ++V 
Sbjct: 406 AAWDPSGTRVII-GSQDDTMGCGIWDLDGHLKHKFSNDSGKLRANDL--AVSPDGQRLVV 462

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            ++      + V      ++    Q ++        S     +  +        I +M+ 
Sbjct: 463 ITETS----IVVFDFVSYEKIHEFQLEDVKLTSVSISQDSRHMLVSMSPD---QIKLMEI 515

Query: 379 DGSQERLLVEDS----NLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLIN 432
           D        E       +    +       ++      G   S++Y    NG   E L  
Sbjct: 516 DTGDVIQRFEGHIQKQFIIRSAFGGADENFVV-----SGSEDSRIYIWRSNGLLIEALDA 570

Query: 433 TPAYASDPQWVG 444
            P   +   W  
Sbjct: 571 HPGCVNSVAWHP 582


>gi|302666298|ref|XP_003024750.1| hypothetical protein TRV_01099 [Trichophyton verrucosum HKI 0517]
 gi|291188819|gb|EFE44139.1| hypothetical protein TRV_01099 [Trichophyton verrucosum HKI 0517]
          Length = 820

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 74/211 (35%), Gaps = 23/211 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +++ VA A+    D L V +++       K + +    +    F  +G+   +S   D
Sbjct: 95  SKDEEWVAVAS----DELTVKIVNINDITEVKYLRDQTKGVKHVTFDPSGRFVTVS-CAD 149

Query: 280 EAMDIYS--------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             + IYS        +        +L        SA + PD +   F +    ++   + 
Sbjct: 150 GIIYIYSFTETEPTLLHRLDGVIRQLETDNEATSSAVWHPDGT--AFAAVEATRDITVIS 207

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             + + Q++ S           WSP G ++A    +G    I + +    +     +  N
Sbjct: 208 CRDWTKQRKFSGGHNGDVTCLAWSPNGAMLA---SAGTDRKILLWETRTQKVIKTYDMPN 264

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                W P+   + F+         +L+  D
Sbjct: 265 AINFRWHPTQNIVAFTTSDG-----ELFIYD 290



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 58/161 (36%), Gaps = 15/161 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMD-------TRIDRAPKRIGNFRSMILAPRFSSNGK 270
            F P+ + V  +  D   I+ +Y           R+D   +++        +  +  +G 
Sbjct: 135 TFDPSGRFVTVSCAD--GIIYIYSFTETEPTLLHRLDGVIRQLETDNEATSSAVWHPDGT 192

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            A  +V+    + + S    +   +            ++SP+ + +       G ++  +
Sbjct: 193 -AFAAVEATRDITVISCRDWTKQRKFSGGHNGDVTCLAWSPNGAMLA----SAGTDRKIL 247

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +      QK I      +  +  W P  +++AFT   GE F
Sbjct: 248 LW-ETRTQKVIKTYDMPNAINFRWHPTQNIVAFTTSDGELF 287


>gi|297561831|ref|YP_003680805.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296846279|gb|ADH68299.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 678

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 58/208 (27%), Gaps = 22/208 (10%)

Query: 248 RAPKRIGNFRSMIL---APRFSSNGKRALISVQKD-----EAMDIYSVDLQSNATERLTN 299
             P+ +     M L   +   + +G   +   Q          D+ ++D  +     L  
Sbjct: 202 GDPRDLTPDAGMALLGASGDLTPDGTTLVTEWQVPVGRGARRTDVVAIDTATGRRRTLAT 261

Query: 300 TLFIN-ISASYSPDSSQIVFESDREGKEQ-------LYVMQSNGSDQKRISQDKEASYFD 351
               +  S   SPD   ++     +G           +++       + +  D E    +
Sbjct: 262 DPAHDFDSPLVSPDGRHVLLVRSSQGDYDGEPRDETAWLVDLATGQGRDLLADHELWPRE 321

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSR 408
             W+     +      G +  +  +         +  D    +   P  SP GR +   R
Sbjct: 322 LAWAADSGAVFLVADHGGRRPVFRIDLASGALTRVTGDHGAYSNLNP--SPDGRHVYALR 379

Query: 409 KK-DGDTGSKLYSIDLNGRNETLINTPA 435
              D        + D        + TP 
Sbjct: 380 DAWDAPPAPVRLAADAADGQPVHLRTPG 407



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 53/172 (30%), Gaps = 7/172 (4%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI------L 237
           V  G  +  +  +D      R L          P  SP+ + V        D        
Sbjct: 237 VGRGARRTDVVAIDTATGRRRTLATDPAHDFDSPLVSPDGRHVLLVRSSQGDYDGEPRDE 296

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             +L+D    +    + +         ++++     +         ++ +DL S A  R+
Sbjct: 297 TAWLVDLATGQGRDLLADHELWPRELAWAADSGAVFLVADHGGRRPVFRIDLASGALTRV 356

Query: 298 TNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEAS 348
           T       + + SPD   +    D  +       + ++ +D + +      S
Sbjct: 357 TGDHGAYSNLNPSPDGRHVYALRDAWDAPPAPVRLAADAADGQPVHLRTPGS 408



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/272 (12%), Positives = 70/272 (25%), Gaps = 72/272 (26%)

Query: 218 RFSPNQQKVAYATYDDE---DILRVYLMDTRI------DRAPKRIGNFRSMILAPRFSSN 268
           R SP+  ++              R  L +          RAP+R+           F  +
Sbjct: 21  RLSPDGTRLVAPVSGPAPDAKSFRSALWEIDTAPESEGGRAPRRLTRSAKGESGVGFLPD 80

Query: 269 GKRALISVQKDEAMD--------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           G     + + D   +        ++ +        ++ +      S + + DS  +   +
Sbjct: 81  GSVLFTTGRPDPEAEADAKARTALWLLPADGGEARQVASRPGGIGSFTVARDSGLVALTA 140

Query: 321 DR----------------------------------------EGKEQLYVM------QSN 334
           D                                          G  +  V        S 
Sbjct: 141 DTLPRSEDEEADREARKAREEAGVTAILHEALPVRSWDSDIGPGHPRYLVAEPPADEDSR 200

Query: 335 GSDQKRISQDKEASYFD--PVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLV 387
             D + ++ D   +        +P G  +             +  +  +     + R L 
Sbjct: 201 LGDPRDLTPDAGMALLGASGDLTPDGTTLVTEWQVPVGRGARRTDVVAIDTATGRRRTLA 260

Query: 388 EDS--NLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            D   +  +P  SP GR ++  R   GD   +
Sbjct: 261 TDPAHDFDSPLVSPDGRHVLLVRSSQGDYDGE 292


>gi|33862763|ref|NP_894323.1| acylamino-acid-releasing protein [Prochlorococcus marinus str. MIT
           9313]
 gi|33634679|emb|CAE20665.1| possible acylamino-acid-releasing enzyme [Prochlorococcus marinus
           str. MIT 9313]
          Length = 174

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 36/94 (38%), Gaps = 4/94 (4%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSN--LQAPTWSPSG 401
                     SP G  I F         +   + + GS+ RLL   +N   +A +WS  G
Sbjct: 50  GNREVSGVSLSPDGKQIIFLAPHRGVLNLWAQELEAGSKPRLLTNSTNRPTRAASWSVDG 109

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           R LI SR   GD    L  ID     E +  TP 
Sbjct: 110 RYLITSRDSYGDENIVLIRIDPT-TGEAIDLTPG 142



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 48/134 (35%), Gaps = 2/134 (1%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A             L    +   P+ +      +     S +GK+ +        ++++
Sbjct: 20  IALPIRLSSPAFADTLSQGEVPLIPREVLFGNREVSGVSLSPDGKQIIFLAPHRGVLNLW 79

Query: 286 SVDLQ-SNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           + +L+  +    LTN+      +AS+S D   ++   D  G E + +++ + +  + I  
Sbjct: 80  AQELEAGSKPRLLTNSTNRPTRAASWSVDGRYLITSRDSYGDENIVLIRIDPTTGEAIDL 139

Query: 344 DKEASYFDPVWSPQ 357
                    +W   
Sbjct: 140 TPGKGVKAAIWGDD 153



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 34/96 (35%), Gaps = 3/96 (3%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           S SPD  QI+F +   G   L+  +   GS  + ++           WS  G  +  ++ 
Sbjct: 58  SLSPDGKQIIFLAPHRGVLNLWAQELEAGSKPRLLTNSTNRPTRAASWSVDGRYLITSRD 117

Query: 367 SGEKFAIGV--MKKDGSQERLLVEDSNLQAPTWSPS 400
           S     I +  +     +   L     ++A  W   
Sbjct: 118 SYGDENIVLIRIDPTTGEAIDLTPGKGVKAAIWGDD 153



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 35/87 (40%), Gaps = 4/87 (4%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALIS--V 276
           SP+ +++ +       +L ++  +      P+ + N  +    A  +S +G+  + S   
Sbjct: 60  SPDGKQIIFLA-PHRGVLNLWAQELEAGSKPRLLTNSTNRPTRAASWSVDGRYLITSRDS 118

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFI 303
             DE + +  +D  +     LT    +
Sbjct: 119 YGDENIVLIRIDPTTGEAIDLTPGKGV 145


>gi|256390322|ref|YP_003111886.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Catenulispora acidiphila DSM 44928]
 gi|256356548|gb|ACU70045.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Catenulispora acidiphila DSM 44928]
          Length = 688

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 97/263 (36%), Gaps = 30/263 (11%)

Query: 201 ANIRYLTPSRDQI-LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           AN+  +  ++ +I  ++ +  P+  ++ +         ++ L D   D  P        +
Sbjct: 177 ANVTAILHTQARIREWDSQLGPDGTRL-FVADAPGAEGKLELRDVTGDLGP--------V 227

Query: 260 ILAPRFSSNGKRALISV-----QKDEAMDIYSVDLQSNATERLTNTLFINISAS----YS 310
           + +   SS+G + +  V       +   ++  +D+ S  +         + S       S
Sbjct: 228 MDSFAVSSDGSKVVYGVLAALPNSEHVAELRLLDVASGTSTLFAGDPEHDHSPHAAPVIS 287

Query: 311 PDSSQIVF-ESDRE-----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           PD S + +  SD +     GK  +++    G   + +++  +      VW+P    + FT
Sbjct: 288 PDDSTVAYLRSDLDTFEATGKPTIHLQPLAGGPSQALAEHLDLWPQGLVWAPGSSALYFT 347

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                +  +  +     +   L  D    +    +P G +L F+ +   D  ++   +D 
Sbjct: 348 ADQLGRAPVFKVDVATGEVTRLTGDRAAYSSLHVTPDGGTL-FAIRSATDAPARPVRLDT 406

Query: 424 NGRNET--LINTPAY-ASDPQWV 443
              ++   L+  P      P WV
Sbjct: 407 ATEDQEPFLLAAPGDTVPLPGWV 429



 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 19/190 (10%)

Query: 187 GIIKNSLCVMDRDGAN----IRYLTPSRDQILFEPRFSPNQQKVAYATY----DDEDILR 238
           G     L V D  GA     +R +T     ++     S +  KV Y       + E +  
Sbjct: 197 GPDGTRLFVADAPGAEGKLELRDVTGDLGPVMDSFAVSSDGSKVVYGVLAALPNSEHVAE 256

Query: 239 VYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRALI------SVQKDEAMDIYSVDL 289
           + L+D     +    G+     S   AP  S +            + +      I+   L
Sbjct: 257 LRLLDVASGTSTLFAGDPEHDHSPHAAPVISPDDSTVAYLRSDLDTFEATGKPTIHLQPL 316

Query: 290 QSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
               ++ L   L        ++P SS + F +D+ G+  ++ +     +  R++ D+ A+
Sbjct: 317 AGGPSQALAEHLDLWPQGLVWAPGSSALYFTADQLGRAPVFKVDVATGEVTRLTGDR-AA 375

Query: 349 YFDPVWSPQG 358
           Y     +P G
Sbjct: 376 YSSLHVTPDG 385



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 74/199 (37%), Gaps = 35/199 (17%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-- 322
            S +GK+ + SV        + VD    A  RLT +     S S+ PD S ++F + R  
Sbjct: 53  LSPDGKKVVSSV--------WEVDRDGGAPFRLTRSAAGESSPSFLPDGS-LLFAAKRAD 103

Query: 323 ----------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                        + L+++ + G + + ++          V    G ++   +   E   
Sbjct: 104 PDAKESDNGNGDNQGLWLLSARGGEARLLAAPPAGIGSVAVARKTGRIVLTARVMPEAKD 163

Query: 373 I------GVMKKDGSQERLLVEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSID 422
           +         +KD +   +L   + ++   W     P G  L F     G  G KL   D
Sbjct: 164 LDDDAARRKARKDANVTAILHTQARIRE--WDSQLGPDGTRL-FVADAPGAEG-KLELRD 219

Query: 423 LNGRNETLINTPAYASDPQ 441
           + G    ++++ A +SD  
Sbjct: 220 VTGDLGPVMDSFAVSSDGS 238



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 29/253 (11%), Positives = 75/253 (29%), Gaps = 44/253 (17%)

Query: 218 RFSPNQQKVAYATY----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             +P+  ++         D + ++       R   AP R+    +   +P F  +G    
Sbjct: 38  ALAPDGSRLVVGVQNLSPDGKKVVSSVWEVDRDGGAPFRLTRSAAGESSPSFLPDGSLLF 97

Query: 274 ISVQKD-----------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            + + D           +   ++ +  +      L        S + +  + +IV  +  
Sbjct: 98  AAKRADPDAKESDNGNGDNQGLWLLSARGGEARLLAAPPAGIGSVAVARKTGRIVLTA-- 155

Query: 323 EGKEQLYVMQSNGSDQKR-----------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             +        +    +R           +        +D    P G  +      G + 
Sbjct: 156 --RVMPEAKDLDDDAARRKARKDANVTAILHTQARIREWDSQLGPDGTRLFVADAPGAEG 213

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF---SRKKDGDTGSKLYSIDLNGRNE 428
            + +    G           + +   S  G  +++   +   + +  ++L  +D+     
Sbjct: 214 KLELRDVTGDL------GPVMDSFAVSSDGSKVVYGVLAALPNSEHVAELRLLDVASGTS 267

Query: 429 TLINTPAYASDPQ 441
           TL     +A DP+
Sbjct: 268 TL-----FAGDPE 275


>gi|209967324|ref|YP_002300239.1| dipeptidyl anminopeptidase, putative [Rhodospirillum centenum SW]
 gi|209960790|gb|ACJ01427.1| dipeptidyl anminopeptidase, putative [Rhodospirillum centenum SW]
          Length = 682

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 68/182 (37%), Gaps = 10/182 (5%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTN-TLFINISASYSPDSSQIVF 318
            A   S +GK       KD  M+++   L + +  + LT  TL    S  ++PDSSQI++
Sbjct: 51  TAATVSPDGKSIAFLAPKDGVMNVWVAPLATPDKAKPLTQETLRPIRSYFWAPDSSQILY 110

Query: 319 ESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAI 373
             D+ G E   LY +     + + ++  ++        S       L+           +
Sbjct: 111 IQDKGGDENFLLYGVDLAKGETRTLTPFEKTRVQVIAISETIKDAILVGVNNRDPRWHDV 170

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGR-SLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +     +  L+ +  N     ++     +L  + K   D G  + +I  +G     + 
Sbjct: 171 HRLNLKTGELTLVRQ--NDGYAGFAADDTLTLRLATKATADGGYAVETIGPDGTTAPFLT 228

Query: 433 TP 434
            P
Sbjct: 229 IP 230



 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 4/93 (4%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSN--LQAPTWSPSG 401
              S      SP G  IAF         + V       + + L +++   +++  W+P  
Sbjct: 46  GNPSRTAATVSPDGKSIAFLAPKDGVMNVWVAPLATPDKAKPLTQETLRPIRSYFWAPDS 105

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +++ + K GD    LY +DL  + ET   TP
Sbjct: 106 SQILYIQDKGGDENFLLYGVDLA-KGETRTLTP 137



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 86/234 (36%), Gaps = 20/234 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISV 276
             SP+ + +A+     + ++ V++         K +       I +  ++ +  + L   
Sbjct: 54  TVSPDGKSIAFLA-PKDGVMNVWVAPLATPDKAKPLTQETLRPIRSYFWAPDSSQILYIQ 112

Query: 277 QKDEAMD--IYSVDLQSNATERLTNTLFINISA-SYSP--DSSQIVFESDREGKEQ-LYV 330
            K    +  +Y VDL    T  LT      +   + S     + +V  ++R+ +   ++ 
Sbjct: 113 DKGGDENFLLYGVDLAKGETRTLTPFEKTRVQVIAISETIKDAILVGVNNRDPRWHDVHR 172

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +     +   + Q    +     ++        +A    +   +A+  +  DG+    L 
Sbjct: 173 LNLKTGELTLVRQ----NDGYAGFAADDTLTLRLATKATADGGYAVETIGPDGTTAPFLT 228

Query: 388 ----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               +     A  ++  G++L + R   G   S L+++D+     TL+   A A
Sbjct: 229 IPHEDGLTSGALGFTTDGKTL-YLRDSRGRDTSALFAMDMASGRTTLVAENAKA 281


>gi|300867087|ref|ZP_07111754.1| WD-40 repeat [Oscillatoria sp. PCC 6506]
 gi|300334918|emb|CBN56920.1| WD-40 repeat [Oscillatoria sp. PCC 6506]
          Length = 900

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 72/228 (31%), Gaps = 15/228 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ +    G  I      +  I     FSP+ + +A A  DD   L        
Sbjct: 649 TGGRDGTIKLWSLSGQKIYEWKAVKGAITSI-SFSPDGKLLAVAGIDDAARLWNLSKLPN 707

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +   +     ++ +  FS NGK        D    +   ++   + E L        
Sbjct: 708 SIASGVTLPGNNGLVRSVTFSPNGKFLA---TLDGNSTVRLWNISGKSEETLPTQAISIS 764

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +S      ++       GK  L+ M       + + +  D +       +SP G+  A 
Sbjct: 765 FSSSQ--QQRLFATVTLNGKVGLWDMSKKDLLKEIETLHLDTK----LVSFSPDGERFAT 818

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                    + +    G Q      + N+   +WSP G+ L  +    
Sbjct: 819 VGIDKT---VRLWNLAGRQVAQFDFNENVVNVSWSPDGKKLAVAGSNG 863



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 70/270 (25%), Gaps = 59/270 (21%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS +   +A    D+     V L +    +  +      S+     FS +GK    +  
Sbjct: 598 SFSQDGLFLATVGVDN----SVKLWNLSGKKTYEWKALQESINSL-IFSPDGKYLA-TGG 651

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D  + ++S  L                S S+SPD   +      +      + +   S 
Sbjct: 652 RDGTIKLWS--LSGQKIYEWKAVKGAITSISFSPDGKLLAVAGIDDAARLWNLSKLPNSI 709

Query: 338 QKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------ 390
              ++            +SP G  +A          + +    G  E  L   +      
Sbjct: 710 ASGVTLPGNNGLVRSVTFSPNGKFLA---TLDGNSTVRLWNISGKSEETLPTQAISISFS 766

Query: 391 ------------------------------------NLQAPTWSPSGRSLIFSRKKDGDT 414
                                               + +  ++SP G           D 
Sbjct: 767 SSQQQRLFATVTLNGKVGLWDMSKKDLLKEIETLHLDTKLVSFSPDGERFA---TVGIDK 823

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             +L+  +L GR     +      +  W  
Sbjct: 824 TVRLW--NLAGRQVAQFDFNENVVNVSWSP 851


>gi|298242048|ref|ZP_06965855.1| hypothetical protein Krac_10486 [Ktedonobacter racemifer DSM 44963]
 gi|297555102|gb|EFH88966.1| hypothetical protein Krac_10486 [Ktedonobacter racemifer DSM 44963]
          Length = 524

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 77/221 (34%), Gaps = 16/221 (7%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
             D++S +  V++S      K  + V D      R +T +          + + + + Y 
Sbjct: 207 SSDWSSAVALVAQSG-----KQQIVVFDPLSGKQRVITSTSCDNAQADAIAHSGKNMLYH 261

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            YD      VY + T      +             +S++  R L ++       +  VD+
Sbjct: 262 CYD--GQYTVYRLLTGQAYRLEGGRRSSGGEYNAVWSTD-DRYLFAMTP---HSLMRVDV 315

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
             N  E L  ++       Y  D+  + F   + G  QL  +      Q+ ++Q   A  
Sbjct: 316 AHNKVEHLPYSISATRLLFYYQDN--LYFSLVQGGSTQLKRIDLVSGAQQVVTQSTAA-- 371

Query: 350 FDPVW-SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
               W  P G  I +T  S  +  I  +  DG    L  +D
Sbjct: 372 RAQFWLRPDGQAIYYTSGSAGRVGIYAVGIDGGSSYLFSQD 412



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 82/248 (33%), Gaps = 53/248 (21%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------FSSNGKRALISVQKD 279
           +++  +     LR  ++ T  + +         ++L P       FSS+   A+  V + 
Sbjct: 161 LSFGLFSRLAWLRTGMLQTTSNTSSATQTADNGVVLPPAPAPNLSFSSDWSSAVALVAQS 220

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
               I   D  S     +T+T   N  A + +     +++    +G+  +Y +       
Sbjct: 221 GKQQIVVFDPLSGKQRVITSTSCDNAQADAIAHSGKNMLYH-CYDGQYTVYRLL--TGQA 277

Query: 339 KRISQDKE--ASYFDPVWSPQGDLI----------------------------------- 361
            R+   +      ++ VWS     +                                   
Sbjct: 278 YRLEGGRRSSGGEYNAVWSTDDRYLFAMTPHSLMRVDVAHNKVEHLPYSISATRLLFYYQ 337

Query: 362 ---AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS-PSGRSLIFSRKKDGDTGSK 417
               F+   G    +  +      ++++ + +  +A  W  P G+++ ++    G  G  
Sbjct: 338 DNLYFSLVQGGSTQLKRIDLVSGAQQVVTQSTAARAQFWLRPDGQAIYYTSGSAGRVG-- 395

Query: 418 LYSIDLNG 425
           +Y++ ++G
Sbjct: 396 IYAVGIDG 403


>gi|228473780|ref|ZP_04058525.1| hypothetical protein CAPGI0001_2599 [Capnocytophaga gingivalis ATCC
           33624]
 gi|228274801|gb|EEK13624.1| hypothetical protein CAPGI0001_2599 [Capnocytophaga gingivalis ATCC
           33624]
          Length = 362

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 52/156 (33%), Gaps = 21/156 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNAT-----ERLT-NTLFINISASYSPDSSQIV 317
           R S N K   +   + +   +  ++ ++        + LT + L    +  ++ ++    
Sbjct: 139 RLSPNKKFIAVDSYEWDERGVLLLNTETGKLIADFTKGLTRDDLGYQSTPVWTENNEMY- 197

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S  +G    +        ++ ++ ++         +PQG  +AF         + V  
Sbjct: 198 --SAIKGVLYRWKEGYGDRVEEVLTLNEGKGASYVTVNPQGTRVAFRYNK----HLWVQN 251

Query: 378 KDGSQERLLVEDSN--------LQAPTWSPSGRSLI 405
            DGS    +                P +SP G+ + 
Sbjct: 252 IDGSNLHQVTTSQLTGSNKADGEYHPVFSPDGKYIA 287



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 68/199 (34%), Gaps = 22/199 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-----NFRSMILAPRFSSNGKRA 272
           R SPN++ +A  +Y+  D   V L++T   +           +       P ++ N +  
Sbjct: 139 RLSPNKKFIAVDSYE-WDERGVLLLNTETGKLIADFTKGLTRDDLGYQSTPVWTENNEM- 196

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVM 331
             S  K   +  +         E LT       S  + +P  +++ F       + L+V 
Sbjct: 197 -YSAIK-GVLYRWKEGYGDRVEEVLTLNEGKGASYVTVNPQGTRVAFRY----NKHLWVQ 250

Query: 332 QSNGSDQKRISQ------DKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQE 383
             +GS+  +++       +K    + PV+SP G  IA       G  +      +     
Sbjct: 251 NIDGSNLHQVTTSQLTGSNKADGEYHPVFSPDGKYIALVGAPTVGRAWTDYDPLQPSQGG 310

Query: 384 RLLVEDSNLQAPTWSPSGR 402
            ++              G+
Sbjct: 311 VVVTSGGYGYVFVIRDDGK 329



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 52/157 (33%), Gaps = 21/157 (13%)

Query: 160 DDIYQSITGEKGDFNSRILF-VSESVVSGIIKNSLCVMDRDGANIRYLTPS------RDQ 212
           D + + +T  +G   S +      + V+      L V + DG+N+  +T S      +  
Sbjct: 213 DRVEEVLTLNEGKGASYVTVNPQGTRVAFRYNKHLWVQNIDGSNLHQVTTSQLTGSNKAD 272

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             + P FSP+ + +A                 +  +    + +             G   
Sbjct: 273 GEYHPVFSPDGKYIALVGAPTVGRAWTDYDPLQPSQGGVVVTSG------------GYGY 320

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           +  ++ D    +Y ++   +    L     I+   SY
Sbjct: 321 VFVIRDDG--KLYDLENDKSGFIVLRQGGGIHGVPSY 355


>gi|254166570|ref|ZP_04873424.1| peptidase, S9A/B/C family, catalytic domain protein
           [Aciduliprofundum boonei T469]
 gi|197624180|gb|EDY36741.1| peptidase, S9A/B/C family, catalytic domain protein
           [Aciduliprofundum boonei T469]
          Length = 631

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 93/263 (35%), Gaps = 39/263 (14%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I +V   +          +   DG +  + +  +D     PRF+    K+ Y    ++
Sbjct: 39  TKIAYVVARMDKKKNDYLSKIYLYDGKSKAFTSGPKD---TMPRFA--GDKIVYVRKGEK 93

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                 +  + +    ++I      ++      +G                 V+ +++  
Sbjct: 94  KSEIRVI--SLVGGESRKIAEVEKGVI--NMKIDGDYVYFLS--------PVVNKENDDV 141

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +R+T+  F         +    ++ +      Q++ +   G   +++S   E      V 
Sbjct: 142 KRITSIPFYF-------NGKGFIYNA----SMQIFRVPLKGGKVEKLSNVDEKISSFDV- 189

Query: 355 SPQGDLIAFTKFSGEKF----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL-IFSRK 409
             +   I ++    E+      + ++K +G  ER+    +++ +   SP G+ +  F   
Sbjct: 190 --KNGRIIYSASEDEREPFMENLYILK-EGKGERISGRKASISSFRISPDGKKIAAFLSF 246

Query: 410 KDGDTG--SKLYSIDLNGRNETL 430
            D       +LY + + G +  L
Sbjct: 247 HDKGFAEHKRLYMLSMEGGDYEL 269



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 50/138 (36%), Gaps = 15/138 (10%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           +D  + IT     FN +    + S         +  +   G  +  L+   ++I     F
Sbjct: 138 NDDVKRITSIPFYFNGKGFIYNAS-------MQIFRVPLKGGKVEKLSNVDEKIS---SF 187

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                ++ Y+  +DE    +  +    +   +RI   ++ I + R S +GK+    +   
Sbjct: 188 DVKNGRIIYSASEDEREPFMENLYILKEGKGERISGRKASISSFRISPDGKKIAAFLSFH 247

Query: 280 E-----AMDIYSVDLQSN 292
           +        +Y + ++  
Sbjct: 248 DKGFAEHKRLYMLSMEGG 265


>gi|150389683|ref|YP_001319732.1| hypothetical protein Amet_1909 [Alkaliphilus metalliredigens QYMF]
 gi|149949545|gb|ABR48073.1| hypothetical protein Amet_1909 [Alkaliphilus metalliredigens QYMF]
          Length = 359

 Score = 57.3 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 69/238 (28%), Gaps = 31/238 (13%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +Y  +   +            +     S + K  L           Y ++L +    
Sbjct: 97  PRSLYSYNINTNEYKLVKEQENIFLGGAVLSGDNKHLLYYGNSLGDPIYYVMNLDTLEAF 156

Query: 296 RLTNTLFIN--------------------ISASYSPDSS---QIVFESDREGKEQLYVMQ 332
            +      N                     S   SP      + +F   +      Y   
Sbjct: 157 NIAGAYSANWADNGVVVGGSYRGGAYSASTSGEISPLGDFENESLFIVRKINDRVYYNTN 216

Query: 333 SNGS------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           S+ S        K+ +     + +D + SP+G+ +   +    +  + +   DG   ++L
Sbjct: 217 SDTSLMVLDLISKQSNSLNIDNVYDVLPSPEGEQLLVLQIKDSRKNLILCDSDGGNIQIL 276

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            E   +   +WS   R + +S       G  +Y  DL    E  I +   +S   W  
Sbjct: 277 AEGEEIGGVSWSLDQRMIAYS--IKDTLGEGIYVYDLLENKEIKIVSDVESSIIHWSP 332



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/298 (15%), Positives = 102/298 (34%), Gaps = 37/298 (12%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           ISD +    T      N  +  +    +S +   SL   + +    + +    +  L   
Sbjct: 66  ISDWL-DENTVIVSKENDSLEKMRLEELSDLYPRSLYSYNINTNEYKLVKEQENIFLGGA 124

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRI---------------DRAPKRIGNFRSMILA 262
             S + + + Y      D +  Y+M+                  D      G++R    +
Sbjct: 125 VLSGDNKHLLYYGNSLGDPIY-YVMNLDTLEAFNIAGAYSANWADNGVVVGGSYRGGAYS 183

Query: 263 PR----FSSNG----------KRA--LISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                  S  G          ++    +    +    +  +DL S  +  L      ++ 
Sbjct: 184 ASTSGEISPLGDFENESLFIVRKINDRVYYNTNSDTSLMVLDLISKQSNSLNIDNVYDVL 243

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              SP+  Q++    ++ ++ L +  S+G + + +++ +E       WS    +IA++  
Sbjct: 244 P--SPEGEQLLVLQIKDSRKNLILCDSDGGNIQILAEGEE--IGGVSWSLDQRMIAYSIK 299

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 I V     ++E  +V D       WSPSG  L++    + D  S +  +  +
Sbjct: 300 DTLGEGIYVYDLLENKEIKIVSDVESSIIHWSPSGEKLVYLEYSEVDHKSSVVYMKYD 357


>gi|73994655|ref|XP_862444.1| PREDICTED: similar to WD repeat and SOCS box containing protein 2
           (WSB-2) (CS box-containing WD protein) isoform 3 [Canis
           familiaris]
          Length = 357

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 76/199 (38%), Gaps = 21/199 (10%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           ++ + + +       +   + ++    F+ +G   L+S  +D+ + I+ ++      + L
Sbjct: 136 QIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVL 195

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +  L      S SPD S +       G++ +++         R  +  ++S     +SP 
Sbjct: 196 SGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPD 252

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-------------SNLQAPTWSPSGRSL 404
             L+    +      I      G + RLL                S+L++  +SP G   
Sbjct: 253 SALLVTASYDTN--VIMWDPYTGERLRLLHHTQLDPPMDDSDVHISSLRSVCFSPEG--- 307

Query: 405 IFSRKKDGDTGSKLYSIDL 423
           ++      D   ++++++L
Sbjct: 308 LYLATVADDRLLRIWALEL 326



 Score = 43.1 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 80/270 (29%), Gaps = 45/270 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 18  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKN 77

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKR---------------ALISVQKDEAM 282
           DT+   +PK            +  +P  S   ++                L +   D  +
Sbjct: 78  DTKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDISCLILATGLNDGQI 137

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 138 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 196

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 197 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 254

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            L+ +     DT   ++     G    L++
Sbjct: 255 LLVTASY---DTNVIMWD-PYTGERLRLLH 280


>gi|299135769|ref|ZP_07028953.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
 gi|298601893|gb|EFI58047.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
          Length = 856

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 79/271 (29%), Gaps = 65/271 (23%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQK-VAYATYDDEDILRVYLMDTRIDRAPKR 252
             +  DG      +      L    +SP+ +K VAY T    D    Y+  + +D+   +
Sbjct: 285 YPISFDG------SEGNYYSLRSFAWSPDSKKLVAYHTRPGYDREVTYIESSPVDQIQPK 338

Query: 253 ----------------------IGNFRSMILAPRFSS------------NGKRALISVQK 278
                                 +   +   + P                +G+       +
Sbjct: 339 HSTIHYNKPGDTLDIAYPALFDVATKQQTDIDPTLFPNPYDISEPVWWKDGRGFTFEYNQ 398

Query: 279 DE--AMDIYSVDLQSNATERL------TNTLFINISASYSP---------DSSQIVFESD 321
               A  +  VD ++     L      T   + N+    S          D  +I++ S+
Sbjct: 399 RGHQAYTVIEVDGKTGKARPLISEQTKTFFYYSNLGPGLSAGRKYRHDVNDGKEIIWASE 458

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-----EKF--AIG 374
           R+G E LY+        K      +    +  W        + +  G     + +   + 
Sbjct: 459 RDGWEHLYLYDGVTGKLKNQITKGDWLVRNVDWVDDAKRQIYFETGGIVPGQDPYFTQLY 518

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +  DG+      +   + + ++S   +  I
Sbjct: 519 RINFDGTGLTKFTDADGMHSVSFSHDHKFYI 549



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 56/174 (32%), Gaps = 19/174 (10%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFES 320
           S +G          +  +++           ++            S ++SPDS ++V   
Sbjct: 260 SFDGNYEAFV----QNFNVFIKPKGDKPAYPISFDGSEGNYYSLRSFAWSPDSKKLVAYH 315

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL-IAFTKFSGEKFAIGVMKKD 379
            R G ++        S   +I       +++    P   L IA+       F +   ++ 
Sbjct: 316 TRPGYDREVTY-IESSPVDQIQPKHSTIHYNK---PGDTLDIAY----PALFDVATKQQT 367

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
                L     ++  P W   GR   F   + G     +  +D   G+   LI+
Sbjct: 368 DIDPTLFPNPYDISEPVWWKDGRGFTFEYNQRGHQAYTVIEVDGKTGKARPLIS 421


>gi|73967734|ref|XP_850117.1| PREDICTED: similar to WD repeat domain 5 [Canis familiaris]
          Length = 334

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 83/225 (36%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 35  YALKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 90

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    L+S   D+ + I+  D+ S    + L          +++P S+ IV  
Sbjct: 91  SDVAWSSD-SNLLVSASDDKTLKIW--DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSG 147

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G     G     
Sbjct: 148 SF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCGKTG--NAA 202

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +L+++D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 SRCMKLILDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 244


>gi|288574055|ref|ZP_06392412.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288569796|gb|EFC91353.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 640

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 81/222 (36%), Gaps = 50/222 (22%)

Query: 261 LAPRFSSNGKRALISV--------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
             P  S +G+    SV        + D  + ++ +D  S     LT          ++ D
Sbjct: 13  SGPSISPDGRSICYSVHKADLEKNRYDSRLWLHILD--SGENRPLT-GSGWEKFFCWNND 69

Query: 313 SSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEA--------------SYFDPVW 354
             +IVF SDR    +G   LY +   G + + I     A              S  DP  
Sbjct: 70  GEEIVFASDRKDPEKGTTDLYAIALGGGEAQPIGSLTFAISSIVHLGGNRYLLSGEDPRE 129

Query: 355 S---PQGDLIAFTKF----SGEKF------AIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           S    + D + F +     +G+ +      A+ + ++ G   +L  +  ++     SP  
Sbjct: 130 SEKLAEADYMVFEQVPFCSNGKGYTAQKRTALYIYERGGEARKLTPDTLDVDRYRLSPDK 189

Query: 402 RSLI-----FSRKKDGDTGSKLYSIDL-NGRNETLINTPAYA 437
             ++     F+  +   +G  L  +DL  G  + LI   A+A
Sbjct: 190 TKVLITGPDFTDVRPIRSG--LRELDLKTGEIDELIPDGAFA 229


>gi|213163788|ref|ZP_03349498.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
          Length = 408

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLIRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGKIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLIRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGKIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 404



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLIRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        +ID    R  N  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGKIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|195999260|ref|XP_002109498.1| histone H3 recognition and presentation By the Wdr5 module Of the
           Mll1 complex [Trichoplax adhaerens]
 gi|190587622|gb|EDV27664.1| histone H3 recognition and presentation By the Wdr5 module Of the
           Mll1 complex [Trichoplax adhaerens]
          Length = 325

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 78/227 (34%), Gaps = 22/227 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++Y      + +   +FSP+ + +A ++ D      + +      +  K +   +  I
Sbjct: 26  YALKYTLSGHTKAISSVKFSPDGEWLASSSAD----ATIKVWGAYDGKYEKTMQGHKLGI 81

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + I+         + L          +++P S+ IV  S
Sbjct: 82  SDVAWSSD-SRLLVSASDDKTLKIWDFP-TGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 139

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + +         +             ++  G LI    + G    I     D 
Sbjct: 140 F---DESVRIWDVRTGKTLKTLPAHSDPVSAVHFNRDGALIVSGSYDG-LCRIW----DT 191

Query: 381 SQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +  + L    +   P      +SP+G+ ++ +     D   KL+   
Sbjct: 192 ASGQCLKTIIDDDNPPVSFVKFSPNGKYILAATL---DNTLKLWDYS 235



 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 62/179 (34%), Gaps = 32/179 (17%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                   R+WDV+  K +               AH  SD +        G         
Sbjct: 137 SGSFDESVRIWDVRTGKTLKTLP-----------AH--SDPVSAVHFNRDGAL------- 176

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
              +VSG       + D   G  ++ +    +  +   +FSPN + +  AT D+     +
Sbjct: 177 ---IVSGSYDGLCRIWDTASGQCLKTIIDDDNPPVSFVKFSPNGKYILAATLDN----TL 229

Query: 240 YLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            L D    +  K     ++    +   FS  G + ++S  +D  + I+  +LQS    +
Sbjct: 230 KLWDYSKGKCLKTYRGHKNEKYCIFASFSVTGGKWIVSGSEDNMIYIW--NLQSKEVVQ 286


>gi|326931580|ref|XP_003211906.1| PREDICTED: WD repeat and SOCS box-containing protein 1-like
           [Meleagris gallopavo]
          Length = 421

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 65/180 (36%), Gaps = 15/180 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLMDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                     ++SPDSS +         + +++   +     R  +          +SP 
Sbjct: 211 KGHQNWVYGCAFSPDSSILC---SVGASKAVFLWDMDKYSMIRKLEGHHNDVVACEFSPD 267

Query: 358 GDLIAFTKFSGEKFA----IGVMKKD-GSQERLLV-------EDSNLQAPTWSPSGRSLI 405
           G L+A   +    +     +GV+  + G               D  +++ ++S  G  + 
Sbjct: 268 GALLATASYDTRVYVWDPYVGVILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHIA 327



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/257 (13%), Positives = 85/257 (33%), Gaps = 43/257 (16%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV   K ++             + HT   ++ + +T      +  ++ VS S   
Sbjct: 151 RIKIWDVYTGKLLLNL-----------MDHT---EVVRDLTFAP---DGSLILVSASRDK 193

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +    +  +  DG N+  +       ++   FSP+   +            V+L D   
Sbjct: 194 TL---RVWDLKDDG-NMMKVLKGHQNWVYGCAFSPDSSILCSV----GASKAVFLWDMDK 245

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-----SVDLQSN----ATERL 297
               +++    + ++A  FS +G     +   D  + ++      + ++          +
Sbjct: 246 YSMIRKLEGHHNDVVACEFSPDGALLA-TASYDTRVYVWDPYVGVILMEFGHLFPPPTPI 304

Query: 298 TNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                 +    S S+S D   I   +D    + +   + +     +++           +
Sbjct: 305 FAGGANDRWVRSVSFSHDGLHIASLAD---DKMIRFWRIDEEYPVQVAPLNNG--LCCTF 359

Query: 355 SPQGDLIAFTKFSGEKF 371
           S  G ++A     G  +
Sbjct: 360 STDGSVLAAGTQDGSVY 376


>gi|281420879|ref|ZP_06251878.1| dipeptidyl-peptidase IV [Prevotella copri DSM 18205]
 gi|281405171|gb|EFB35851.1| dipeptidyl-peptidase IV [Prevotella copri DSM 18205]
          Length = 729

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 50/154 (32%), Gaps = 25/154 (16%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             ++ AS S D  Q++  S + GK+   +   N         +        V SP G  +
Sbjct: 46  GTDLYASISNDGKQVISYSFKTGKQMSILFDVNAVKAPFEQIEGY------VISPDGKKL 99

Query: 362 AFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                    +         +        + L +  N Q  TWSP  R + F +       
Sbjct: 100 LIMTHREAIYRRSFKAEYFIYDIAKKSLKKLSQGVNQQVATWSPDSRHIAFVKD------ 153

Query: 416 SKLYSIDLNGRNETLINTPAYASD-----PQWVG 444
           + L+  D  G  ET I      ++     P WV 
Sbjct: 154 NNLFVTD--GDKETQITRDGKFNEVINGIPDWVY 185



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 67/415 (16%), Positives = 138/415 (33%), Gaps = 83/415 (20%)

Query: 47  PVSIAFTKFVSIDELGGKVSEVVSKDLQR--SDVFNLISQDSFKQKITNPDSIPRFQDWN 104
           PV IA    VS  +   K+      DL+   S  F      S+   I   D    +   +
Sbjct: 5   PVFIATVMMVSAMQAADKL------DLKAITSGEF----AASYVTGINPIDGTDLYASIS 54

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK--KFFSSPASWRKIAHTISDDI 162
           + G QV+       +   ++ +   L+DV   K    +   +  SP   + +  T  + I
Sbjct: 55  NDGKQVI---SYSFKTGKQMSI---LFDVNAVKAPFEQIEGYVISPDGKKLLIMTHREAI 108

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y+     +        +    +    +K         G N +  T           +SP+
Sbjct: 109 YRRSFKAE--------YFIYDIAKKSLKKL-----SQGVNQQVAT-----------WSPD 144

Query: 223 QQKVAYATYDDEDILRVY--LMDTRIDRAPKRIGNFR--------SMILAPRFSSNGKRA 272
            + +A+   ++  +         TR  +  + I            S   A  ++++G   
Sbjct: 145 SRHIAFVKDNNLFVTDGDKETQITRDGKFNEVINGIPDWVYEEEFSFNRAFAWNADGTAI 204

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS---PDSSQIVFESDREGKEQLY 329
                 +  +  YS+ +   +    T++ + +    YS   P + Q         K  L+
Sbjct: 205 GWIRFDESHVKTYSLQMFEGSHP--THSEYHDYPGEYSYKYPKAGQ------DNSKVSLW 256

Query: 330 VMQSNGSDQKRISQDKEASYFDPVW--SPQGD-LIAFT-KFSGEKFAIGVMKKDGSQERL 385
                      +    ++  + P    SP  + LI +T     +   +  +     + R+
Sbjct: 257 SYDMKNGKTVALDVPVDSDGYYPRIKTSPDANSLIVYTMNRHQDDMRLYAVNPFTGKSRM 316

Query: 386 LVEDSNLQAPTW--------SPSGRS-LIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           L+++S    P +        S  G+  ++    +DG     LY  D+NG+    +
Sbjct: 317 LIKES---VPKFVKEEVIENSIVGKKNILLPSDRDGFM--HLYLYDMNGKLLRQV 366


>gi|238487970|ref|XP_002375223.1| WD repeat protein [Aspergillus flavus NRRL3357]
 gi|220700102|gb|EED56441.1| WD repeat protein [Aspergillus flavus NRRL3357]
          Length = 537

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 69/210 (32%), Gaps = 18/210 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              ++L     + +   RFSP+   +A           V + DT   R         + I
Sbjct: 161 YQQKFLLRGHLRGVSAVRFSPDSTMIA----SGGADGAVKVWDTLTGRLVHTFEGHLAGI 216

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVF 318
               +S +G     S   D+ + ++  ++ +     +            ++SP  + +V 
Sbjct: 217 STISWSPDGAIIA-SGSDDKTIRLW--NVLTGKAHSIPFVGHHNYVYQIAFSPKGNMLVS 273

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E +++     +   R                 G LIA     G    I +   
Sbjct: 274 GSY---DEAVFLWDVRSATVMRSLPAHSDPVGGIDVVWDGTLIASCATDG---LIRIWDT 327

Query: 379 DGSQ-ERLLVEDSNLQAPT--WSPSGRSLI 405
              Q  R LV + N    +  +SP+G+ ++
Sbjct: 328 ATGQCLRTLVHEDNPPVTSVKFSPNGKFVL 357



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 71/196 (36%), Gaps = 15/196 (7%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G    R    S  + SG    ++ V D     + +        +    +SP+   +A  
Sbjct: 172 RGVSAVRFSPDSTMIASGGADGAVKVWDTLTGRLVHTFEGHLAGISTISWSPDGAIIASG 231

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D    +R++ + T    +   +G+  + +    FS  G   + S   DEA+ ++ V  
Sbjct: 232 SDD--KTIRLWNVLTGKAHSIPFVGHH-NYVYQIAFSPKGNMLV-SGSYDEAVFLWDVRS 287

Query: 290 QSNATERLTNTL----FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            +     L         I++   +  D + I   +  +G  +++   + G   + +  + 
Sbjct: 288 AT-VMRSLPAHSDPVGGIDV--VW--DGTLIASCAT-DGLIRIWDT-ATGQCLRTLVHED 340

Query: 346 EASYFDPVWSPQGDLI 361
                   +SP G  +
Sbjct: 341 NPPVTSVKFSPNGKFV 356



 Score = 36.5 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 59/175 (33%), Gaps = 30/175 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G +I  G D   +  RLW+V   K            S   + H   + +YQ     KG  
Sbjct: 225 GAIIASGSDDKTI--RLWNVLTGK----------AHSIPFVGHH--NYVYQIAFSPKG-- 268

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     +VSG    ++ + D   A +    P+    +       +   +A    D 
Sbjct: 269 --------NMLVSGSYDEAVFLWDVRSATVMRSLPAHSDPVGGIDVVWDGTLIASCATDG 320

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKR-ALISVQKDEAMDIYS 286
                + + DT   +  + + +  +  + + +FS NGK     S+     +  Y 
Sbjct: 321 ----LIRIWDTATGQCLRTLVHEDNPPVTSVKFSPNGKFVLAWSLDDCVRLWNYV 371


>gi|148240656|ref|YP_001226043.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Synechococcus
           sp. WH 7803]
 gi|147849195|emb|CAK24746.1| Dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Synechococcus
           sp. WH 7803]
          Length = 673

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 58/175 (33%), Gaps = 10/175 (5%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
               LR  L  +     P+ +      I     S +G+R          ++++  DL  +
Sbjct: 19  FSSPLRPVLAGSPPPLIPREVLFGNPEIAGVSLSPDGQRIAYLAPSGGVLNLWVRDLDGD 78

Query: 293 ATER-LTNTLF-INISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEAS 348
           A  R LT        +AS++ D   ++   D EG E   L  +     +   ++  K   
Sbjct: 79  APARVLTQQRDRPQRAASWTADGRYLISSRDAEGDENTVLVRIDPKTGEATDLTPAKGVK 138

Query: 349 YFDPVW---SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL---VEDSNLQAPTW 397
                    +P   ++           + V+  +  Q RLL    +D    +  W
Sbjct: 139 AILVAGDQDAPSELVVGLNDRDPRFHDLYVIDVNNGQRRLLYRSTDDGRNVSVDW 193



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 63/150 (42%), Gaps = 14/150 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALIS--V 276
           SP+ Q++AY       +L +++ D   D   + +   R     A  ++++G+  + S   
Sbjct: 52  SPDGQRIAYLA-PSGGVLNLWVRDLDGDAPARVLTQQRDRPQRAASWTADGRYLISSRDA 110

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGKEQ-LYVMQ 332
           + DE   +  +D ++     LT       I ++      S  +V  +DR+ +   LYV+ 
Sbjct: 111 EGDENTVLVRIDPKTGEATDLTPAKGVKAILVAGDQDAPSELVVGLNDRDPRFHDLYVID 170

Query: 333 SNGSDQKRISQDKEA------SYFDPVWSP 356
            N   ++ + +  +        + D VW P
Sbjct: 171 VNNGQRRLLYRSTDDGRNVSVDWIDGVWQP 200


>gi|21328624|gb|AAM48631.1| conserved hypothetical protein [uncultured marine proteobacterium]
          Length = 166

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 37/95 (38%), Gaps = 3/95 (3%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           S     + S +G + +          ++S+        +LT    I     + P+S+ +V
Sbjct: 61  SGASGAQISPDGDQVVYRSSITGTPQLWSIASGGGQPRQLTFGQGI-TFFRWLPNSAGLV 119

Query: 318 FESDREGKEQ--LYVMQSNGSDQKRISQDKEASYF 350
           + +D  G EQ   +V+   G  ++ I    +  + 
Sbjct: 120 YGADNNGNEQETYFVIDRYGEMERTIFPATDGGFR 154



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 28/78 (35%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            SP GD + +         +  +   G Q R L     +    W P+   L++    +G+
Sbjct: 68  ISPDGDQVVYRSSITGTPQLWSIASGGGQPRQLTFGQGITFFRWLPNSAGLVYGADNNGN 127

Query: 414 TGSKLYSIDLNGRNETLI 431
                + ID  G  E  I
Sbjct: 128 EQETYFVIDRYGEMERTI 145



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A  SPD  Q+V+ S   G  QL+ + S G   ++++  +  ++F   W P    + +  
Sbjct: 65  GAQISPDGDQVVYRSSITGTPQLWSIASGGGQPRQLTFGQGITFF--RWLPNSAGLVYGA 122

Query: 366 FSGEKFA--IGVMKKDGSQERLLV 387
            +         V+ + G  ER + 
Sbjct: 123 DNNGNEQETYFVIDRYGEMERTIF 146


>gi|20092826|ref|NP_618901.1| surface antigen gene [Methanosarcina acetivorans C2A]
 gi|19918128|gb|AAM07381.1| surface antigen gene [Methanosarcina acetivorans C2A]
          Length = 456

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 25/231 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----------RFSSNGK 270
           P   +V    Y      RV      +      IG   + ++ P           F+ +G+
Sbjct: 120 PTGSRV----YVTNRYSRVEDNSNNVSVINTVIGTSTNTVMDPVNMGLSTYNVAFTPDGE 175

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +   +  ++       +D  +N               + SPD +++   +   G   + V
Sbjct: 176 KIYATNSRNNTTS--VLDAATNKVTATVPVGDYPTDVAISPDGNKVYVIN--SGSNNVSV 231

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---KFSGEKFAIGVMKKDGSQERLLV 387
           + +N ++        +    D   SP G  I  T           + V+    +     V
Sbjct: 232 IDTNTNNVTGTVPVGDGP-SDIAVSPDGTKIYVTNSGSLDEPGNTVSVINTATNSVTATV 290

Query: 388 E-DSNLQAPTWSPSGR--SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
              +  +    +P G+   ++ S     D    +  ID      T      
Sbjct: 291 SIGTAPRGVAVTPDGKKAYVVVSDIHSSDYTDNVSVIDTTTNKVTATVNTG 341



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 51/142 (35%), Gaps = 11/142 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  KV Y      + + V   +T        +G+  S I     S +G +  ++  
Sbjct: 211 AISPDGNKV-YVINSGSNNVSVIDTNTNNVTGTVPVGDGPSDI---AVSPDGTKIYVTNS 266

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQI-VFESD---REGKEQLYV 330
                   +V + + AT  +T T+ I  +      +PD  +  V  SD    +  + + V
Sbjct: 267 GSLDEPGNTVSVINTATNSVTATVSIGTAPRGVAVTPDGKKAYVVVSDIHSSDYTDNVSV 326

Query: 331 MQSNGSDQKRISQDKEASYFDP 352
           + +  +         + +   P
Sbjct: 327 IDTTTNKVTATVNTGKYTMNCP 348



 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 70/223 (31%), Gaps = 17/223 (7%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            AY T    D   V+++DT  D     I            +  G +  ++     +  + 
Sbjct: 36  FAYVTSIGIDTGTVFVIDTATDSLTAVI-PVEGWAGEVAINPAGTKVYVTDISGLSTTVS 94

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKR 340
            +D  +N  + + +        + +P  S+ V+ ++R     +    + V+ +       
Sbjct: 95  VIDTATNTVDAVVDVGGYPRGVAVNPTGSR-VYVTNRYSRVEDNSNNVSVINTVIGTSTN 153

Query: 341 ISQDKEA---SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPT 396
              D      S ++  ++P G+ I  T       +  V+    ++    V   +      
Sbjct: 154 TVMDPVNMGLSTYNVAFTPDGEKIYATNSRNNTTS--VLDAATNKVTATVPVGDYPTDVA 211

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            SP G  +           + +  ID N  N T          
Sbjct: 212 ISPDGNKVYVI----NSGSNNVSVIDTNTNNVTGTVPVGDGPS 250


>gi|302340186|ref|YP_003805392.1| hypothetical protein Spirs_3712 [Spirochaeta smaragdinae DSM 11293]
 gi|301637371|gb|ADK82798.1| hypothetical protein Spirs_3712 [Spirochaeta smaragdinae DSM 11293]
          Length = 925

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 48/330 (14%), Positives = 104/330 (31%), Gaps = 52/330 (15%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA----------HTI 158
           Q ++ G    +      + + L+  + R +   +   +  ++   +           H  
Sbjct: 207 QAMLLGSYKTKTPGAYPLGYMLY-TRARSEYDSQASDTVFSALAHVPLPVLGPYIGVHRA 265

Query: 159 SD----DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           ++    ++Y+      GDF  R       ++       L  + +DG           QI 
Sbjct: 266 TNLSPAELYRETVETYGDFWRR----QSEILPKDTLTRLTPLAQDGF----------QIY 311

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
              R S +   +A+  Y       ++++        +        I A      G   + 
Sbjct: 312 RNLRLSSDGMLIAW-FYSFNRGNEIHILSKEGKLLERVAAEPLGNIDA-----GGPYIIW 365

Query: 275 SVQKDEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----FESDREG 324
               ++A        I   D ++     L        + S + D + +     +  D+ G
Sbjct: 366 DENIEDAKFMKSSNRIMLYDRRTGKRRSLV-GKGRYTAPSLNSDGT-LAGLLRWNEDQSG 423

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            E L V    G+  +R    +   +F   WS  G  I +         IG + ++  + +
Sbjct: 424 -ELLIVETETGTTLERFDLPQGEFWFSFDWSDDGKRICYLSSGILGQTIGEIDRETGKTK 482

Query: 385 LLVED--SNLQAPTWSPSGRSLIFSRKKDG 412
            L        Q+P +   G  ++F+    G
Sbjct: 483 TLAASTEFTFQSPRFI-DGG-ILFTSSYSG 510


>gi|284053950|ref|ZP_06384160.1| WD-40 repeat-containing serine/threonin protein kinase [Arthrospira
           platensis str. Paraca]
          Length = 629

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 55/166 (33%), Gaps = 14/166 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+ + +A  + D      V + + R            +++ +  F+ NG+  +     
Sbjct: 440 ISPDNRAIATGSADG----NVRVWNRRTGLILYNNNQHSTIVYSVAFTPNGRWLV---TG 492

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               +I+ +D Q +    R         S + +PD  QIV          + +     ++
Sbjct: 493 SGDGNIHIIDWQIDQLRHRFPGHTGEVRSLAITPDGLQIV---SGGTDNNIKIWNLITAE 549

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           + R       +      SP G  IA +        + +   +  + 
Sbjct: 550 EARTLTGHRGAVIAVAVSPDGTQIASSSRDRT---VKIWDLETGEL 592



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 71/167 (42%), Gaps = 7/167 (4%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y  + G       +I   + ++ +G    ++ V +R    I Y       I++   F+PN
Sbjct: 426 YPPLVGASPIEALQISPDNRAIATGSADGNVRVWNRRTGLILYNNNQHSTIVYSVAFTPN 485

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +   + D      ++++D +ID+   R       + +   + +G + + S   D  +
Sbjct: 486 GRWLVTGSGDG----NIHIIDWQIDQLRHRFPGHTGEVRSLAITPDGLQIV-SGGTDNNI 540

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            I+++ + +     LT      I+ + SPD +QI   S R+   +++
Sbjct: 541 KIWNL-ITAEEARTLTGHRGAVIAVAVSPDGTQIA-SSSRDRTVKIW 585



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 77/242 (31%), Gaps = 26/242 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   N+  +   +   +          +    FS +   +A        + +V   +  
Sbjct: 366 SGSRDNTTRLWHIETGEVLQNFVGNSSAILSVDFSNDGLSLA----AGTQLSQVIEWNLE 421

Query: 246 IDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TL 301
                P  +G     I A + S + +    +   D  + ++  + ++     L N     
Sbjct: 422 TIEWYPPLVGASP--IEALQISPDNRAIA-TGSADGNVRVW--NRRTGLI--LYNNNQHS 474

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I  S +++P+   +V  S   G   ++++       +               +P G  I
Sbjct: 475 TIVYSVAFTPNGRWLVTGS---GDGNIHIIDWQIDQLRHRFPGHTGEVRSLAITPDGLQI 531

Query: 362 AFTKFSGEKFAIGVMKKDGSQE-RLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                 G    I +     ++E R L      + A   SP G  +  S +   D   K++
Sbjct: 532 V---SGGTDNNIKIWNLITAEEARTLTGHRGAVIAVAVSPDGTQIASSSR---DRTVKIW 585

Query: 420 SI 421
            +
Sbjct: 586 DL 587



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 49/126 (38%), Gaps = 8/126 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+G    ++ ++D     +R+  P     +     +P+  ++     D+     + + + 
Sbjct: 490 VTGSGDGNIHIIDWQIDQLRHRFPGHTGEVRSLAITPDGLQIVSGGTDN----NIKIWNL 545

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
                 + +   R  ++A   S +G +   S  +D  + I+  DL++      LTN   +
Sbjct: 546 ITAEEARTLTGHRGAVIAVAVSPDGTQIA-SSSRDRTVKIW--DLETGELLNTLTNPQAV 602

Query: 304 NISASY 309
             S  +
Sbjct: 603 VNSLVF 608



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 61/170 (35%), Gaps = 26/170 (15%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIV 317
           + +   S +G+    S  +D    ++   +++    +  + N+  I +S  +S D   + 
Sbjct: 352 VQSVAVSPDGRIIA-SGSRDNTTRLW--HIETGEVLQNFVGNSSAI-LSVDFSNDGLSLA 407

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVM 376
                 G +   V++ N    +       AS  +    SP    IA     G    + V 
Sbjct: 408 -----AGTQLSQVIEWNLETIEWYPPLVGASPIEALQISPDNRAIATGSADG---NVRVW 459

Query: 377 KKDGSQERLLVEDSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +      +L  ++       +  ++P+GR L+      G     ++ ID
Sbjct: 460 NRRTGL--ILYNNNQHSTIVYSVAFTPNGRWLV-----TGSGDGNIHIID 502


>gi|312195895|ref|YP_004015956.1| hypothetical protein FraEuI1c_2036 [Frankia sp. EuI1c]
 gi|311227231|gb|ADP80086.1| hypothetical protein FraEuI1c_2036 [Frankia sp. EuI1c]
          Length = 357

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 74/244 (30%), Gaps = 46/244 (18%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           + L+D    +A + +     +  A   S +G+     +      +I+ V     A  R+T
Sbjct: 75  LVLLDPTNGQATRTLVPSGVVGDALAVSPDGRAVYYELGAGCQHEIWRVSTADGAKTRIT 134

Query: 299 NTLFINISASYSPDSSQIVFE---------------SDREGKEQLYVMQSNGSDQKRI-- 341
                  + + SP+  ++ +                +D     Q+ V+        R   
Sbjct: 135 TAGN---APALSPNGERLAYATQYFDNDNHASCYPDNDITAGYQVIVLDLATHQTHRYPM 191

Query: 342 -----SQDKEASYFDPVWSPQGDLIAFTK---FSGEKFAIGVMKK---------DGSQER 384
                +    A      WSP G  +A +       E + + +M           DGS + 
Sbjct: 192 APQVAATGLPAPVDHLSWSPDGGRLAVSMSAVQDNEGWQLAIMNPTTDTTYFQDDGSTQV 251

Query: 385 LLVEDSNLQAP----TWSPSGRSLI----FSRKKDGDTGSKLYSID-LNGRNETLINTPA 435
            L   +N         + P+G   +     S      T   +  ID  +G+    +    
Sbjct: 252 PLPAGTNQDTFYAEGAFLPNGHLFVVRQCCSGYPPNTTNVDMLEIDPASGKQLRQVAVGL 311

Query: 436 YASD 439
              D
Sbjct: 312 TDRD 315



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 74/242 (30%), Gaps = 54/242 (22%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED--------------ILRV 239
            V   DGA  R  T         P  SPN +++AYAT   ++                +V
Sbjct: 122 RVSTADGAKTRITTAGN-----APALSPNGERLAYATQYFDNDNHASCYPDNDITAGYQV 176

Query: 240 YLMDTRIDRAPK-------RIGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDL 289
            ++D    +  +             + +    +S +G R  +S+     +E   +  ++ 
Sbjct: 177 IVLDLATHQTHRYPMAPQVAATGLPAPVDHLSWSPDGGRLAVSMSAVQDNEGWQLAIMNP 236

Query: 290 ---------QSNATERLTNTLFINI---SASYSPDSSQIVFESDREGKE-------QLYV 330
                      +    L      +      ++ P+    V      G          L +
Sbjct: 237 TTDTTYFQDDGSTQVPLPAGTNQDTFYAEGAFLPNGHLFVVRQCCSGYPPNTTNVDMLEI 296

Query: 331 MQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
             ++G   ++++    +  +     S  G  + +    G+   I     DG++  +L   
Sbjct: 297 DPASGKQLRQVAVGLTDRDHTSLDASADGHWLLYLS--GKDLEI---SHDGAKPTILATG 351

Query: 390 SN 391
             
Sbjct: 352 FL 353


>gi|189463929|ref|ZP_03012714.1| hypothetical protein BACINT_00263 [Bacteroides intestinalis DSM
           17393]
 gi|189438502|gb|EDV07487.1| hypothetical protein BACINT_00263 [Bacteroides intestinalis DSM
           17393]
          Length = 666

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 54/155 (34%), Gaps = 27/155 (17%)

Query: 299 NTLFINISASYSPDSSQIVFESDRE-----GKEQLYVMQSNGSDQK-----RISQDKEAS 348
           N+ F   + S+S D   + F   R         ++YV Q  G++        I  D  +S
Sbjct: 233 NSEFEEGACSFSADGKTMYFTRCRTLPNAPAYAEIYVSQRAGAEWGSPQKCAILNDTLSS 292

Query: 349 YFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQER-----LLVEDSNLQAPTW 397
              P  SP GD + F             + I V + DG          +    +   P++
Sbjct: 293 VAHPALSPAGDYLYFVSDMPGGQGGLDLWRINVTR-DGFGYVDNLGPEINTSGDEMFPSF 351

Query: 398 SPSGRSLIFSRK-KDGDTGSKLYSI---DLNGRNE 428
           +P G  L FS     G  G  ++      L GR  
Sbjct: 352 APDGT-LYFSSTGHPGMGGLDIFRAVPDSLTGRWH 385



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 82/272 (30%), Gaps = 39/272 (14%)

Query: 149 ASWRK---IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
             W+K   +A  ++ +  +       D  +       ++ +      + V  R GA    
Sbjct: 220 KQWQKPEPLASEVNSEFEEGACSFSADGKTMYFTRCRTLPNAPAYAEIYVSQRAGAEWGS 279

Query: 206 -----LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR----APKRIG-- 254
                +       +  P  SP    + + +        + L    + R        +G  
Sbjct: 280 PQKCAILNDTLSSVAHPALSPAGDYLYFVSDMPGGQGGLDLWRINVTRDGFGYVDNLGPE 339

Query: 255 -NFRSMILAPRFSSNGKRALISVQKD---EAMDIYSV---DLQSN----ATERLTNTLFI 303
            N     + P F+ +G     S         +DI+      L         +   N+   
Sbjct: 340 INTSGDEMFPSFAPDGT-LYFSSTGHPGMGGLDIFRAVPDSLTGRWHIENMKSPVNSQSD 398

Query: 304 NISASYSPDS-SQIVFESDRE---GKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQ 357
           +   ++ P + ++  F S+R    G + +Y  +        K +  DKE           
Sbjct: 399 DFGMTFEPGAPNRGFFSSNRGDARGWDHIYSFELPEVHHILKGLVYDKEGDVLSDA---- 454

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
             L+      G    I V KKDG+  + L   
Sbjct: 455 --LVTLVGEDGTYMKINV-KKDGTFTQELTPG 483


>gi|118397021|ref|XP_001030846.1| hypothetical protein TTHERM_01006540 [Tetrahymena thermophila]
 gi|89285162|gb|EAR83183.1| hypothetical protein TTHERM_01006540 [Tetrahymena thermophila SB210]
          Length = 2897

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 98/263 (37%), Gaps = 22/263 (8%)

Query: 191  NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
              + V++ +G  ++         +    FS + + +A  + D      ++ ++   D   
Sbjct: 1734 CKIWVVE-NGFQLQNTIKEHKGSISSVAFSVDNKYLATGSED--KTCSIWNVEKGFDLLN 1790

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            K I    S I +  FS++GK    +  +D+   ++ VD       ++        S ++S
Sbjct: 1791 K-IEGETSWITSVAFSADGKYVA-TGSQDKTCKVWKVDKGFELFTKIEGHTEKITSVAFS 1848

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             D   +   S R+   +++  Q +      I ++ + +     +S     +A        
Sbjct: 1849 SDRKYLA-TSSRDNTCKIWNAQKDFELISTI-KEHQKAINQVAFSSDSKYLATASSD--- 1903

Query: 371  FAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID----- 422
            F   +         +      D  +Q+  +SP+G+ L        D+  K++ ++     
Sbjct: 1904 FTCKIWDIQKGFLLINSIEGHDRAIQSVAFSPNGKYLA---TGSFDSTCKIWDVEKEFQI 1960

Query: 423  -LNGRNETLINTPAYASDPQWVG 444
             +       + + A++SD +++ 
Sbjct: 1961 VITIEERKTVYSVAFSSDGKYIA 1983



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 76/226 (33%), Gaps = 18/226 (7%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G  +       D+ +    FSPN + +A  ++D        + D   +         R  
Sbjct: 1914 GFLLINSIEGHDRAIQSVAFSPNGKYLATGSFDS----TCKIWDVEKEFQIVITIEERKT 1969

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            + +  FSS+GK    +   D    I++++     T ++        S ++S D   +   
Sbjct: 1970 VYSVAFSSDGKYIA-TGSDDNTCKIWNIEKGFEFTNKIEGHRDQITSVTFSTDGKYLATS 2028

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S+    +   +       +   +     S  +   +S     +  +    +   I     
Sbjct: 2029 SN---DKICKIWNVEKGFELFNTILGHTSLINSVAFSADSKYLV-SGSDDKTCKIW--NI 2082

Query: 379  DGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +   E +   + + +   +  +S  G+ +        D+  K+++I
Sbjct: 2083 EKGFEVIYSNEGHTECIYSIDFSADGKYVATGSW---DSTCKIWNI 2125



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 105/308 (34%), Gaps = 43/308 (13%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     ++WDV+   QI+                     I +  T     F+S   +
Sbjct: 1941 ATGSFDSTCKIWDVEKEFQIV-------------------ITIEERKTVYSVAFSSDGKY 1981

Query: 180  VSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
            ++    +G   N+  + + + G             +    FS + + +A ++ D   I +
Sbjct: 1982 IA----TGSDDNTCKIWNIEKGFEFTNKIEGHRDQITSVTFSTDGKYLATSSND--KICK 2035

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            ++ ++   +     +G   S+I +  FS++ K  + S   D+   I+  +++       +
Sbjct: 2036 IWNVEKGFELFNTILG-HTSLINSVAFSADSKYLV-SGSDDKTCKIW--NIEKGFEVIYS 2091

Query: 299  NTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWS 355
            N        S  +S D   +   S         +     G +     +   ++     +S
Sbjct: 2092 NEGHTECIYSIDFSADGKYVATGS---WDSTCKIWNIEKGYELINTIEGHTSNIRQVAFS 2148

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGD 413
              G  +A T        I  + K G +  + +E  +  + +  +SP G+ L    +   D
Sbjct: 2149 TNGKYLA-TGSDDNTCKIWNVHK-GFELIITIEQHSESVNSVAFSPDGQYLAIGSQ---D 2203

Query: 414  TGSKLYSI 421
                ++ +
Sbjct: 2204 KTCSIWEV 2211



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 81/240 (33%), Gaps = 33/240 (13%)

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
             + + +A  + D +   +++ ++   +            + +  FSS+GK    +   D 
Sbjct: 1676 HDGKYLATCSDDKK--CQIWNLENGFELINTIETGHTKALSSVSFSSDGKFLA-TGSLDT 1732

Query: 281  AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
               I+ V+        +        S ++S D+  +   S+    +   +          
Sbjct: 1733 TCKIWVVENGFQLQNTIKEHKGSISSVAFSVDNKYLATGSE---DKTCSIWNVEKGFDLL 1789

Query: 341  ISQDKEASY-FDPVWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVEDSN 391
               + E S+     +S  G  +A              + F +   K +G  E++      
Sbjct: 1790 NKIEGETSWITSVAFSADGKYVATGSQDKTCKVWKVDKGFELFT-KIEGHTEKIT----- 1843

Query: 392  LQAPTWSPSGRSLIFSRKKDGDTGSKLY-------SIDLNGRNETLINTPAYASDPQWVG 444
              +  +S   + L  S +   D   K++        I     ++  IN  A++SD +++ 
Sbjct: 1844 --SVAFSSDRKYLATSSR---DNTCKIWNAQKDFELISTIKEHQKAINQVAFSSDSKYLA 1898



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 88/220 (40%), Gaps = 34/220 (15%)

Query: 238  RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--------L 289
             + +      +  K I NF S +     + +GK    +   D+   I++++        +
Sbjct: 1647 EIDIYSLSSLQIIKNIQNFPSSLTLSSLTHDGKYLA-TCSDDKKCQIWNLENGFELINTI 1705

Query: 290  QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            ++  T+ L+       S S+S D   +      +   +++V++ NG   +   ++ + S 
Sbjct: 1706 ETGHTKALS-------SVSFSSDGKFLA-TGSLDTTCKIWVVE-NGFQLQNTIKEHKGSI 1756

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFS 407
                +S     +A T    +  +I  ++K G     ++  E S + +  +S  G+ +   
Sbjct: 1757 SSVAFSVDNKYLA-TGSEDKTCSIWNVEK-GFDLLNKIEGETSWITSVAFSADGKYVATG 1814

Query: 408  RKKDGDTGSKLYSID--------LNGRNETLINTPAYASD 439
             +   D   K++ +D        + G  E + +  A++SD
Sbjct: 1815 SQ---DKTCKVWKVDKGFELFTKIEGHTEKITSV-AFSSD 1850



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/269 (11%), Positives = 87/269 (32%), Gaps = 55/269 (20%)

Query: 110  VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
             + TG              ++W+++   ++I        ++ R++A              
Sbjct: 2110 YVATGSWDST--------CKIWNIEKGYELIN-TIEGHTSNIRQVA-------------- 2146

Query: 170  KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
               F++   +++    S      +  + + G  +        + +    FSP+ Q +A  
Sbjct: 2147 ---FSTNGKYLA--TGSDDNTCKIWNVHK-GFELIITIEQHSESVNSVAFSPDGQYLAIG 2200

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---------- 279
            + D      ++ ++       K +  F   +++  FS++ K     +  D          
Sbjct: 2201 SQD--KTCSIWEVENEF-ELIKVMQGFDKQVISVTFSADCKYLATGIDDDNSTCFIWSVE 2257

Query: 280  -EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                 I+ V+ ++   +++           +S D+  +   S + G   ++ MQ+     
Sbjct: 2258 QGFEVIHGVEGETRFIQKV----------VFSTDNKYLATFSQKNG--CIWDMQNGFELI 2305

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +I      + +   ++     +      
Sbjct: 2306 NKIETGHTDNVYSAAFTSDSKYLTTGSRD 2334


>gi|332521774|ref|ZP_08398225.1| fibronectin, type III domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
 gi|332042604|gb|EGI78805.1| fibronectin, type III domain-containing protein [Lacinutrix
           algicola 5H-3-7-4]
          Length = 507

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 87/232 (37%), Gaps = 29/232 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   V Y+     +       +  +D    ++ +  +    PR +    +          
Sbjct: 225 DGNSVIYS----GNQDDSTTGNGDVDVGILKLTSETNNSFRPRANMAINKIAYLRTTGGN 280

Query: 282 MDIYSVDLQSNATERLTNT------LFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             I++++   +   ++TN        F +I   ++ + S++ + +      +LY +  +G
Sbjct: 281 AQIFTMNTDGSNKTQVTNAIPVTGFRFDHIDFCWAQNGSKLYYPNF----NELYSINPDG 336

Query: 336 SDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFA--IGVMKKDG-SQERLLVEDS 390
           S    I +  + S+   V   +   DL+     +   +   I  ++    ++E ++ E  
Sbjct: 337 SGAILIYETVDGSFISEVETVASDNDLVLLKTNNANGYNARIFTLRLSTQTEETVIAEGF 396

Query: 391 N--LQAPTWSPSGRSLIFSRKKDG-------DTGSKLYSIDLN-GRNETLIN 432
           N  L     S +G  ++++R   G          S+++  D+N G N  ++ 
Sbjct: 397 NGALGGIDISANGNQVVYTRDLSGYEQPDYRQFQSRIFFYDINLGTNTQIVT 448



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 24/145 (16%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQK---------RISQDKEASYFDPVWSPQGDL 360
           SP+ +  +F  + +G   +Y    + S            +++ +   + F P  +   + 
Sbjct: 213 SPN-NPFLFVKEEDGNSVIYSGNQDDSTTGNGDVDVGILKLTSETN-NSFRPRANMAINK 270

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE-------DSNLQAPTWSPSGRSLIFSRKKDGD 413
           IA+ + +G    I  M  DGS +  +           +     W+ +G  L +       
Sbjct: 271 IAYLRTTGGNAQIFTMNTDGSNKTQVTNAIPVTGFRFDHIDFCWAQNGSKLYY------P 324

Query: 414 TGSKLYSIDLNGRNETLINTPAYAS 438
             ++LYSI+ +G    LI      S
Sbjct: 325 NFNELYSINPDGSGAILIYETVDGS 349


>gi|222093933|ref|YP_002527984.1| prolyl oligopeptidase family protein, putative [Bacillus cereus Q1]
 gi|221237982|gb|ACM10692.1| prolyl oligopeptidase family protein, putative [Bacillus cereus Q1]
          Length = 652

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 54/339 (15%), Positives = 117/339 (34%), Gaps = 64/339 (18%)

Query: 143 KFFSSPASWRKIAHTISDDIYQS-------ITGEKGDFNSRILFVSES-----VVSGIIK 190
            F    A+W+   +     IY+        +T    D    +   +          G  K
Sbjct: 33  AFVKRTANWKDNTYRNHAWIYEKGKGQSYPLTNGDIDSTCPLWSPNSRDIAYLSPVGNGK 92

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-----EDILRVY----- 240
           N + V   DG     +T   + I    +++P  +   Y T        +    +Y     
Sbjct: 93  NQIFVKSLDGYGGVQITNEEEGISIF-KWNPTGKGFYYITQSKECEEIKKRKELYGDFQH 151

Query: 241 ---------------LMDTRIDRAPKRIGNFRSMILAPRF-------SSNGKRALI---- 274
                              + D+  + I     +     F       S++GK+ +     
Sbjct: 152 VGKEHQNNCLCYVEIEKVIQNDKEEREINGVYQLTDGKDFYIHDFDISNDGKKVVCMATP 211

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKE------- 326
           S+      DIY +D+++   +++     +  S  +SP+ ++I +  S RE +        
Sbjct: 212 SLNDYMNGDIYILDVEAEELQKMNVDRLLGGSVCFSPEGNKICYSASIREKEYYRNHIQE 271

Query: 327 -QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             L +   N  +  +   + +++     W  +G  I         + IG++ +DG+ E +
Sbjct: 272 STLEIYDMNTGEVLQPLTNFDSTVMPLQWIAKG--ILIRWQDKTNYRIGLLAEDGTME-V 328

Query: 386 LVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           L +  D  +   + +  G  + +S+    +T  ++Y  D
Sbjct: 329 LSDNVDGFIMDASITKDGNHITYSKAITNET-FEIYLDD 366



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +   ++ +        ++ + +     P+WSP   
Sbjct: 22  STNISDDGKNVAFVKRTANWKDNTYRNHAWIYEKGKGQSYPLT-NGDIDSTCPLWSPNSR 80

Query: 360 LIAFTKFSG-EKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G  K  I V   DG    ++  E+  +    W+P+G+   +  + 
Sbjct: 81  DIAYLSPVGNGKNQIFVKSLDGYGGVQITNEEEGISIFKWNPTGKGFYYITQS 133



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 8/111 (7%)

Query: 266 SSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GK      +             +  +     +  LTN    +    +SP+S  I + 
Sbjct: 26  SDDGKNVAFVKRTANWKDNTYRNHAWIYEKGKGQSYPLTNGDIDSTCPLWSPNSRDIAYL 85

Query: 320 SDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S    GK Q++V   +G    +I+ ++E       W+P G    +   S E
Sbjct: 86  SPVGNGKNQIFVKSLDGYGGVQITNEEEGISIFK-WNPTGKGFYYITQSKE 135



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 8/92 (8%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPS 400
           +      S  G  +AF K +        +    + +K   Q   L   D +   P WSP+
Sbjct: 19  TLSSTNISDDGKNVAFVKRTANWKDNTYRNHAWIYEKGKGQSYPLTNGDIDSTCPLWSPN 78

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            R + +     G+  ++++   L+G     I 
Sbjct: 79  SRDIAYLSPV-GNGKNQIFVKSLDGYGGVQIT 109



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 38/299 (12%), Positives = 91/299 (30%), Gaps = 40/299 (13%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T    D  +       +        +   +   G    Y   + D     P +SPN + +
Sbjct: 23  TNISDDGKNVAFVKRTANWKDNTYRNHAWIYEKGKGQSYPLTNGDIDSTCPLWSPNSRDI 82

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           AY +       ++++          +I N    I   +++  GK      Q  E  +I  
Sbjct: 83  AYLSPVGNGKNQIFVKSLD-GYGGVQITNEEEGISIFKWNPTGKGFYYITQSKECEEIKK 141

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK------R 340
                   + +      N           + +        ++  +  N  +++      +
Sbjct: 142 RKELYGDFQHVGKEHQNNC----------LCYV-------EIEKVIQNDKEEREINGVYQ 184

Query: 341 ISQDKEASYFDPVWSPQGDLIA-FTKFSGEKF---AIGVMKKDGSQERLL-VEDSNLQAP 395
           ++  K+    D   S  G  +      S   +    I ++  +  + + + V+     + 
Sbjct: 185 LTDGKDFYIHDFDISNDGKKVVCMATPSLNDYMNGDIYILDVEAEELQKMNVDRLLGGSV 244

Query: 396 TWSPSGRSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
            +SP G  + +S         R    ++  ++Y ++  G     +        P QW+ 
Sbjct: 245 CFSPEGNKICYSASIREKEYYRNHIQESTLEIYDMN-TGEVLQPLTNFDSTVMPLQWIA 302


>gi|328862786|gb|EGG11886.1| hypothetical protein MELLADRAFT_115030 [Melampsora larici-populina
           98AG31]
          Length = 714

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 73/218 (33%), Gaps = 39/218 (17%)

Query: 210 RDQILFEPRFSPNQQKVAY------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            D ++   +FSP+   +A         Y      ++  +               + I + 
Sbjct: 373 HDSVVCCVKFSPDGLILATGCNRHTTLYSTRTGSKICTLLDESHN-----TKADNYIRSA 427

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN----TLFINISASYSPDSSQIVFE 319
            FS +GK    +  +D  + I+ V     A  R+ N          S ++SPD S +V  
Sbjct: 428 SFSPDGKYLA-TGSEDRIIRIWEV-----AKRRIVNRFQGHKSEIYSLAFSPDGSILVSG 481

Query: 320 SDREGKEQLYVMQSNGS--------DQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGE 369
           S   G +   +              +   ++++   +A       SP G L+A       
Sbjct: 482 S---GDKTARIWDMEQGLCTFHLLIEDITVTENGPVDAGVTSVCVSPDGTLLAAGSLDT- 537

Query: 370 KFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
              + +          +L     ++ +  +SP G+ L+
Sbjct: 538 --VVRLWDTSTGHLLDKLKGHKDSVYSVAFSPDGKFLV 573



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 51/319 (15%), Positives = 96/319 (30%), Gaps = 55/319 (17%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            L TG      +DR+    R+W+V  R+ +            R   H    +IY      
Sbjct: 435 YLATGS-----EDRI---IRIWEVAKRRIV-----------NRFQGHK--SEIYSLAFSP 473

Query: 170 KGDFNSRILFVSESVVSGIIKNS----LCVMDRDGANIRYLTPSR-DQILFEPRFSPNQQ 224
            G      + VS S             LC       +I        D  +     SP+  
Sbjct: 474 DGS-----ILVSGSGDKTARIWDMEQGLCTFHLLIEDITVTENGPVDAGVTSVCVSPDGT 528

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +A  + D      V L DT       ++   +  + +  FS +GK  + S   D+ + +
Sbjct: 529 LLAAGSLDT----VVRLWDTSTGHLLDKLKGHKDSVYSVAFSPDGKFLV-SGSLDKTLKL 583

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  DL +     + N   +        +  ++   +DR      +      +        
Sbjct: 584 W--DLATLNRNNMVNASLVKRED--GENGEKV--TTDRG-----FDSSRASTVCTTTLTG 632

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--GR 402
            +        SP G  I           + V        + +++       + + S  G 
Sbjct: 633 HKDYVLSVAVSPDGAWIMSGSKDRG---VQVWDPKTGMAQFMLQGHRNSVISIAVSEVGG 689

Query: 403 SLIFSRKKDGDTGSKLYSI 421
            L       GD  ++++S 
Sbjct: 690 LLA---TGSGDWNARIWSY 705


>gi|312200162|ref|YP_004020223.1| hypothetical protein FraEuI1c_6369 [Frankia sp. EuI1c]
 gi|311231498|gb|ADP84353.1| WD40 repeat, subgroup [Frankia sp. EuI1c]
          Length = 955

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 73/227 (32%), Gaps = 13/227 (5%)

Query: 184 VVSGIIKNSLC-VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             SG     L  + D      R+   +R        FSP+   +A   YD      ++ +
Sbjct: 324 TASGNGAIRLWNITDPTTPRQRWTIRTRFAAGPAVAFSPDGAWLA-TGYDTAHAA-LWRI 381

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTL 301
           D      P+ + +    +    FS++G+R + +   + A     +V  +     R  +  
Sbjct: 382 DRAGAPVPRALLDHPGGLTGLHFSADGRRLVGTFAGESARVWDVTVPSRPRVLGRAGDRR 441

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDL 360
               +A++ PD   +    +R     +     + +  +R      E   F    +P G  
Sbjct: 442 AARGAATF-PDGRWLATVGER-----VEFWDVSSAPVRRTHLTAGEGPLFGVAVAPDGQT 495

Query: 361 IAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLI 405
           +A  +  G       +       R  +      +    +   GR L 
Sbjct: 496 LAVGRNDGAVDLWHTVDPSAPAPRASIDAHSGWVTMVEFGSDGRWLA 542



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 78/244 (31%), Gaps = 32/244 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ +++A A+  +  I    + D    R    I    +   A  FS +G     +  
Sbjct: 314 AFSPDARRLATAS-GNGAIRLWNITDPTTPRQRWTIRTRFAAGPAVAFSPDGAWLA-TGY 371

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                 ++ +D       R L +         +S D  ++V  +      +++ +     
Sbjct: 372 DTAHAALWRIDRAGAPVPRALLDHPGGLTGLHFSADGRRLV-GTFAGESARVWDVTVPSR 430

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +         +       P G  +A      E + +       S        +  + P 
Sbjct: 431 PRVLGRAGDRRAARGAATFPDGRWLATVGERVEFWDV------SSAPVRRTHLTAGEGPL 484

Query: 397 W----SPSGRSLIFSRKKDGDTGSKLY------------SIDLNGRNETLINTPAYASDP 440
           +    +P G++L   R    D    L+            SID +    T++    + SD 
Sbjct: 485 FGVAVAPDGQTLAVGRN---DGAVDLWHTVDPSAPAPRASIDAHSGWVTMVE---FGSDG 538

Query: 441 QWVG 444
           +W+ 
Sbjct: 539 RWLA 542



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/259 (15%), Positives = 81/259 (31%), Gaps = 29/259 (11%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                +L  +DR GA +          L    FS + +++      +       + D  +
Sbjct: 372 DTAHAALWRIDRAGAPVPRALLDHPGGLTGLHFSADGRRLVGTFAGE----SARVWDVTV 427

Query: 247 DRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
              P+ +G   + R+   A  F  +G+      ++ E  D+ S  ++      LT     
Sbjct: 428 PSRPRVLGRAGDRRAARGAATF-PDGRWLATVGERVEFWDVSSAPVR---RTHLTAGEGP 483

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIA 362
               + +PD   +      +G   L+      +   R S D  + +   V +   G  +A
Sbjct: 484 LFGVAVAPDGQTLA-VGRNDGAVDLWHTVDPSAPAPRASIDAHSGWVTMVEFGSDGRWLA 542

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                     + +     +   + V     + P       ++ FS  +       L    
Sbjct: 543 TVSAD----QVALWDL--TDPTVPVGRLRARLPV-----TAVAFSPARG-----LLAVAS 586

Query: 423 LNGRNETLINTPAYASDPQ 441
           L+G    L  T A    P 
Sbjct: 587 LDGSVNLLRPTAAIELSPA 605



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 73/208 (35%), Gaps = 34/208 (16%)

Query: 250 PKRIGNF--RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           P+R+  F  R    +PR+S                    V +         +      + 
Sbjct: 270 PRRLRWFFERGWRRSPRWS----------------RPPRVSVLPGWARNRVDVTSPVYAV 313

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKF 366
           ++SPD+ ++   S   G  +L+ +    + ++R + + + A+     +SP G  +A T +
Sbjct: 314 AFSPDARRLATASG-NGAIRLWNITDPTTPRQRWTIRTRFAAGPAVAFSPDGAWLA-TGY 371

Query: 367 SGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                A+  + + G+     LL     L    +S  GR L+          ++++ + + 
Sbjct: 372 DTAHAALWRIDRAGAPVPRALLDHPGGLTGLHFSADGRRLV---GTFAGESARVWDVTVP 428

Query: 425 GRN--------ETLINTPAYASDPQWVG 444
            R                A   D +W+ 
Sbjct: 429 SRPRVLGRAGDRRAARGAATFPDGRWLA 456


>gi|75910071|ref|YP_324367.1| WD-40 repeat-containing serine/threonine protein kinase [Anabaena
           variabilis ATCC 29413]
 gi|75703796|gb|ABA23472.1| serine/threonine protein kinase with WD40 repeats [Anabaena
           variabilis ATCC 29413]
          Length = 576

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 71/210 (33%), Gaps = 17/210 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A       D   + L +    +           + +  FS  G   L +  
Sbjct: 293 AISPDGNTLA----SGGDDKIIRLWELNTQKLVASFSGHSQAVTSVTFSPQG-EILATAS 347

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + ++ +   S     L        S S+SP+   +   S     +Q+ +       
Sbjct: 348 DDKTVKLWHLP-TSREVFTLNGHTKPVKSVSFSPNGQILASGS---WDKQVKLWDVTTGK 403

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAP- 395
           +    +  +       +SPQ +++A   F      +  + ++  +  LL     + +A  
Sbjct: 404 EISALKAHQLQVSAVAFSPQEEILASASFD-RTIRLWQITQNHPRYTLLKTLSGHTRAVL 462

Query: 396 --TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +SP G+ L        D   KL+ I+ 
Sbjct: 463 AIAFSPDGKILATGSD---DNTIKLWDINT 489



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 77/239 (32%), Gaps = 19/239 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     ++ +     +   +      + +    FSPN Q +A  ++D     +V L D  
Sbjct: 345 TASDDKTVKLWHLPTSREVFTLNGHTKPVKSVSFSPNGQILASGSWDK----QVKLWDVT 400

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD---LQSNATERLTNTLF 302
             +    +   +  + A  FS   +  L S   D  + ++ +     +    + L+    
Sbjct: 401 TGKEISALKAHQLQVSAVAFSPQ-EEILASASFDRTIRLWQITQNHPRYTLLKTLSGHTR 459

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             ++ ++SPD   +   SD      + +   N             S     ++     + 
Sbjct: 460 AVLAIAFSPDGKILATGSD---DNTIKLWDINTGQLIDTLLVHSWSVVAVTFTADNKTLI 516

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS--PSGRSLIFSRKKDGDTGSKLY 419
              +      I + K   ++E + +          +  P  + +  S +   D   KL+
Sbjct: 517 SASWDKT---IKLWKVSTTEEIVTLASHLDSVCAIAVNPVAQMIASSSR---DKTIKLW 569



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 79/233 (33%), Gaps = 50/233 (21%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S   Q+L +G   K+         +LWDV   K+I   K           AH +      
Sbjct: 379 SPNGQILASGSWDKQ--------VKLWDVTTGKEISALK-----------AHQLQVSAVA 419

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY----LTPSRDQILFEPRFS 220
               E+               S     ++ +      + RY          + +    FS
Sbjct: 420 FSPQEEIL------------ASASFDRTIRLWQITQNHPRYTLLKTLSGHTRAVLAIAFS 467

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + +A  + D+     + L D    +    +      ++A  F+++ K   IS   D+
Sbjct: 468 PDGKILATGSDDN----TIKLWDINTGQLIDTLLVHSWSVVAVTFTADNKTL-ISASWDK 522

Query: 281 AMDIYSVDLQSNATERLTNTL----FINISASYSPDSSQIVFESDREGKEQLY 329
            + ++ V   +     L + L     I ++       +Q++  S R+   +L+
Sbjct: 523 TIKLWKVS-TTEEIVTLASHLDSVCAIAVNPV-----AQMIASSSRDKTIKLW 569


>gi|298375350|ref|ZP_06985307.1| alanyl dipeptidyl peptidase [Bacteroides sp. 3_1_19]
 gi|298267850|gb|EFI09506.1| alanyl dipeptidyl peptidase [Bacteroides sp. 3_1_19]
          Length = 830

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 88/271 (32%), Gaps = 37/271 (13%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKV 226
            ++G    R+L  ++ +     ++ +   D + G   +      D  + +   S + + +
Sbjct: 303 PKEGTNLIRVLEPADRIPGFRDRSFIWRYDLKTGLYEQLTFGHTDTYIND--ISADSRYL 360

Query: 227 AYATYD------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            ++T D            +Y +D +             +  A  FS +GK+ L++   D 
Sbjct: 361 LFSTSDRVYTSLPHSRNSLYKLDLQTMAIDTIWEKAPYVNQA-AFSPDGKQLLVAGAGD- 418

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
                + D      ++        IS SY  D              QL++          
Sbjct: 419 -----AFDGIGRNIKQ------GQISNSY--DG-------------QLFLYDLASRKASP 452

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           +++D   +  D VW+     I       +   I        + + +    ++        
Sbjct: 453 LTKDFNPNVIDAVWNRFNGQIYILCEDEDYQRIYTCDPANGKIKQVAASEDIIMSYALAD 512

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              ++F   +     ++LY+ DL G    L+
Sbjct: 513 NAPVLFYYGQSASNANRLYAYDLKGGKNRLV 543



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/373 (9%), Positives = 104/373 (27%), Gaps = 65/373 (17%)

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           L +   V G +   G       F ++ V D+      +    P  ++ +   ++ +    
Sbjct: 101 LNSDRYVKGTLDISGPG----AFEVF-VNDKPVGASSELVMEPRRYQVVVKYLTAETDTC 155

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
               K  F S       + ++   + +L            +   +D        SPN + 
Sbjct: 156 PPSLKATFKSEAEAKVVASLNPEKRYTLL----------NILEGKDFQGV--SLSPNGKY 203

Query: 226 -VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +        +               + +      +   ++     R   +    +  ++
Sbjct: 204 ALVKYVNRFPEGKSESYGQLMDAATGRVLLQDGGFLTTAKWMPKSNRLYYTRTGLDGTEL 263

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----------------- 327
            +VD  +     L   L       ++PD S +++  + EG ++                 
Sbjct: 264 VTVDPSTYQQTVLVPNL-PKGRFVFTPDESTLLYTVEEEGPKEGTNLIRVLEPADRIPGF 322

Query: 328 -----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-------AFTKFSGEKFAIGV 375
                ++         ++++     +Y +   S     +        +T     + ++  
Sbjct: 323 RDRSFIWRYDLKTGLYEQLTFGHTDTYIN-DISADSRYLLFSTSDRVYTSLPHSRNSLYK 381

Query: 376 MKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFS---------------RKKDGDTGSKLY 419
           +         +  +   +    +SP G+ L+ +                +       +L+
Sbjct: 382 LDLQTMAIDTIWEKAPYVNQAAFSPDGKQLLVAGAGDAFDGIGRNIKQGQISNSYDGQLF 441

Query: 420 SIDLNGRNETLIN 432
             DL  R  + + 
Sbjct: 442 LYDLASRKASPLT 454


>gi|291571244|dbj|BAI93516.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 179

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 50/151 (33%), Gaps = 10/151 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S + + +A           +YL D    +  +++    S + + RFS  G+    S  
Sbjct: 30  AVSADGRLLA-----LRSNKDIYLWDLSTGQLLRQLTGHTSTVNSVRFSRRGQTLA-SGS 83

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++ V        +LT       S  +S     +   S   G   + +       
Sbjct: 84  GDNTVRLWDV-ATGRELRQLTGHTSTVNSVRFSRRGQTLASGS---GDNTVRLWDVATGR 139

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + R      ++ +   +S +G  +A     G
Sbjct: 140 ELRQLTGHTSTVYSVSFSRRGQTLASGSDDG 170


>gi|91794543|ref|YP_564194.1| peptidase S9, prolyl oligopeptidase active site region [Shewanella
           denitrificans OS217]
 gi|91716545|gb|ABE56471.1| peptidase S9, prolyl oligopeptidase active site region [Shewanella
           denitrificans OS217]
          Length = 828

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 69/195 (35%), Gaps = 13/195 (6%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R  + + ++     A +++  G   L+ ++  +  D +   +  N  + +T     + + 
Sbjct: 365 RKVQLMQDWGWGQSAIQWNDAGTDLLVLLESVDNKDRWLARVDLNKGKLVTEHRLHDDAW 424

Query: 308 S--------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                    + P   +  + S+  G  QLYV +++      ++Q +     D   S  G 
Sbjct: 425 VNYDYNQFGWLPRGDKFYYLSEESGYSQLYV-KASTDKAMALTQGRFV-VNDVQLSADGK 482

Query: 360 LIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            + +   K     + +  +     +   L +       + SP  +SL+ +         +
Sbjct: 483 YLYYRANKVHPGIYNVYRVDVATGKSEQLTDWQGDLQYSLSPDNQSLLLTASSLTKPN-E 541

Query: 418 LYSIDLNGRNETLIN 432
           LY   + G    L +
Sbjct: 542 LYIQPIGGELLALTD 556



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/267 (16%), Positives = 92/267 (34%), Gaps = 22/267 (8%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L  VK        + + S    RK+   + D  +     +  D  + +L + ESV +   
Sbjct: 343 LASVKTENAKAKGERYKSEKQLRKV-QLMQDWGWGQSAIQWNDAGTDLLVLLESVDN--- 398

Query: 190 KNSLCVMDRDGANIRYLTPSR-------DQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
                +   D    + +T  R       +    +  + P   K  Y + +        L 
Sbjct: 399 -KDRWLARVDLNKGKLVTEHRLHDDAWVNYDYNQFGWLPRGDKFYYLSEESG---YSQLY 454

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNT 300
                     +   R ++   + S++GK       K      ++Y VD+ +  +E+LT+ 
Sbjct: 455 VKASTDKAMALTQGRFVVNDVQLSADGKYLYYRANKVHPGIYNVYRVDVATGKSEQLTDW 514

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGD 359
              ++  S SPD+  ++  +    K     +Q  G +   ++    A++ +  W +P   
Sbjct: 515 QG-DLQYSLSPDNQSLLLTASSLTKPNELYIQPIGGELLALTDYTSAAFKEYPWQAP--Q 571

Query: 360 LIAF-TKFSGEKFAIGVMKKDGSQERL 385
           +IA  +          V   +G     
Sbjct: 572 IIAVPSHHGAGVVHARVYLPEGFDATQ 598



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 28/92 (30%), Gaps = 1/92 (1%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              Y    W P+GD   +         + V         L      +     S  G+ L 
Sbjct: 426 NYDYNQFGWLPRGDKFYYLSEESGYSQLYVKASTDKAMALTQGRFVVNDVQLSADGKYLY 485

Query: 406 FSRKKDGDTGSKLYSIDL-NGRNETLINTPAY 436
           +   K       +Y +D+  G++E L +    
Sbjct: 486 YRANKVHPGIYNVYRVDVATGKSEQLTDWQGD 517


>gi|20143912|ref|NP_599027.1| WD repeat and SOCS box-containing protein 1 isoform 2 [Homo
           sapiens]
 gi|9082135|gb|AAF82746.1|AF240696_1 WSB1 isoform 2 [Homo sapiens]
 gi|119571413|gb|EAW51028.1| WD repeat and SOCS box-containing 1, isoform CRA_c [Homo sapiens]
 gi|119571414|gb|EAW51029.1| WD repeat and SOCS box-containing 1, isoform CRA_c [Homo sapiens]
          Length = 275

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 61/178 (34%), Gaps = 28/178 (15%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            F+ +G   L+S  +D+ + ++ +    N  + L        S ++SPDSS +       
Sbjct: 31  TFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLC---SVG 87

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + +++   +     R  +          +SP G L+A   +      + +        
Sbjct: 88  ASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALLATASYDT---RVYIWDPHNGD- 143

Query: 384 RLLVEDSNLQAP-----------------TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +L+E  +L  P                 ++S  G  +        D   + + ID +
Sbjct: 144 -ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVA---SLADDKMVRFWRIDED 197



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 65/202 (32%), Gaps = 27/202 (13%)

Query: 185 VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VS     +L V D +D  N+  +       ++   FSP+   +            V+L +
Sbjct: 41  VSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSV----GASKAVFLWN 96

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---------- 293
                  +++      ++A  FS +G     +   D  + I+  D  +            
Sbjct: 97  MDKYTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFP 153

Query: 294 -TERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
               +      +    S S+S D   +   +D +   + + +  +     +++       
Sbjct: 154 PPTPIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG-- 208

Query: 350 FDPVWSPQGDLIAFTKFSGEKF 371
               +S  G ++A     G  +
Sbjct: 209 LCCAFSTDGSVLAAGTHDGSVY 230


>gi|317137732|ref|XP_001727920.2| chromosome segregation protein (SepB) [Aspergillus oryzae RIB40]
          Length = 838

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 93/284 (32%), Gaps = 25/284 (8%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                E  D +  I   +ES + G    ++   + +   +  L       + +   S + 
Sbjct: 50  PKTVDEGIDGHMGIGATNESFIMGAEDGTVWQYEIESGRMENLLVRCALPVRDIAVSNDG 109

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +  A A+    D L V ++        K + +         F  +G+   +S   D  + 
Sbjct: 110 EWAAVAS----DELTVKIVKIEDMTKVKYLRDQSKGTKHVTFDPSGRYIAVSCT-DGILY 164

Query: 284 IYSVDLQ--------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           IYS+  +          A  RL           + PD +   F +    ++      S  
Sbjct: 165 IYSLLAEEPELVQKLDGAIRRLEPEDEATSRVVWHPDGT--AFAAAEATRDIAIFSTSEW 222

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
             +K  S           WSP G L+A    +G    + + +    +     +  N+   
Sbjct: 223 KKEKVFSGGHNGDVTAISWSPNGALLA---TAGADGQVLLWETKTQKVLQRYDFPNVINL 279

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSID--LNGRNETLINTPAYA 437
            W PS  SL F+         +L+  D  ++   + L+  P  A
Sbjct: 280 AWHPSNNSLSFTTSDG-----ELFIYDGVVSNEQQPLLQKPLQA 318



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 74/237 (31%), Gaps = 25/237 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++PN +++   T      +R+Y +    +      G    M +          + I   
Sbjct: 22  AYTPNGRRII--TGGSNSAIRIYTVGQDGEPKTVDEGIDGHMGIGAT-----NESFIMGA 74

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +D  +  Y +  +S   E L     + +   + S D       SD      + +++    
Sbjct: 75  EDGTVWQYEI--ESGRMENLLVRCALPVRDIAVSNDGEWAAVASDEL---TVKIVKIEDM 129

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG--------VMKKDGSQERLLVE 388
            + +  +D+        + P G  IA +   G  +           V K DG+  RL  E
Sbjct: 130 TKVKYLRDQSKGTKHVTFDPSGRYIAVSCTDGILYIYSLLAEEPELVQKLDGAIRRLEPE 189

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           D       W P G    F+   +      ++S     + +          +   W  
Sbjct: 190 DEATSRVVWHPDGT--AFAA-AEATRDIAIFSTSEWKKEKVFSGGHNGDVTAISWSP 243


>gi|149238730|ref|XP_001525241.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450734|gb|EDK44990.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 870

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 86/246 (34%), Gaps = 28/246 (11%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R L       ++   FSP+ + +   + D    +R++ +DT       +  N    + 
Sbjct: 582 NCRKLI-GHSGPVYGISFSPDNKFLITCSED--KTIRLWSLDTFTALVSYKGHNQP--VW 636

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES 320
             +FS  G    ++   D+   +++ D       R+      ++    + P+ S  VF  
Sbjct: 637 DVKFSPLGHY-FVTSSHDQTARLWATDHIY--PLRIFAGHINDVDCVEFHPN-SHYVFTG 692

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +   +++          R+      +      SP G  +A    +G+   I +    G
Sbjct: 693 SSDKTCRMW--DVQTGHCVRVFMGHTNAINTIAASPDGRWLA---SAGDDNVINIWDI-G 746

Query: 381 SQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSI-----DLNGRNETLI 431
           +  RL     + ++      +S  G  L+      GD   +++ +     D     E L+
Sbjct: 747 TGRRLKTMKGHGRSSIYSLAFSRDGTVLV---SGSGDCSVRVWDVKKNTNDAGPEPEALL 803

Query: 432 NTPAYA 437
           N    A
Sbjct: 804 NATGSA 809



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 66/225 (29%), Gaps = 23/225 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + + +   +       R        D   K IG     +    FS + K   I+  +
Sbjct: 555 WSLDGKPLQSQSSSQSKKDRKNHH--LPDNCRKLIG-HSGPVYGISFSPDNKFL-ITCSE 610

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASY----SPDSSQIVFESDREGKEQLYVMQSN 334
           D+ + ++S+D        L +    N    +    SP     V  S  +   +L+     
Sbjct: 611 DKTIRLWSLD----TFTALVSYKGHN-QPVWDVKFSPLGHYFV-TSSHDQTARLWATDHI 664

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                RI            + P    + FT  S +   +  ++        +   + +  
Sbjct: 665 Y--PLRIFAGHINDVDCVEFHPNSHYV-FTGSSDKTCRMWDVQTGHCVRVFMGHTNAINT 721

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
              SP GR L        D    ++ I   G    L     +   
Sbjct: 722 IAASPDGRWLA---SAGDDNVINIWDI---GTGRRLKTMKGHGRS 760


>gi|327541565|gb|EGF28096.1| dipeptidyl peptidase IV [Rhodopirellula baltica WH47]
          Length = 708

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 54/280 (19%), Positives = 99/280 (35%), Gaps = 42/280 (15%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +V          +   + D         T   +    +P  SP+   V        DI  
Sbjct: 73  YVVREKAIDSGDSVQAIYDVVTGERTVATSVAEITSRDPMLSPDGTSVLKKQRRGWDIRN 132

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +   +TR    P+  G+     L+  +S +GKR L                  +   RL 
Sbjct: 133 LTSGETRPLLKPEEAGDIHYQDLS--WSPDGKRILFVESN-------------SNEVRLR 177

Query: 299 NTLFINISASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQKRISQ-----DKEASY 349
           N L  +   SY P  S+  F   R G +    ++ V+ ++G D   ++       K+  Y
Sbjct: 178 NVLVPDD-PSY-PGVSKTRFA--RVGTKIPELRVGVVDASGEDVHSVTWLPIEFPKDGGY 233

Query: 350 FDPV-WSPQGDLIAFTK----FSGEKFAIGVMKK-------DGSQERLLVEDSNLQAPTW 397
           F  V W+   + I   +        +F +  +         + ++   +          W
Sbjct: 234 FGEVSWAGNSEEILVERLSRFRDKREFLLARVDGVVSTIFEETNEAWAVGSHGINSGVKW 293

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           +  G+S +F  +KDG    + ++ID +G+NE L+    Y 
Sbjct: 294 TDGGKSFVFLSEKDG--WRQAFAIDRDGKNERLLTLGDYD 331



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 67/213 (31%), Gaps = 26/213 (12%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT------PSRDQILFEPRFSPNQ 223
            G   +R       V + I +  + V+D  G ++  +T      P       E  ++ N 
Sbjct: 188 PGVSKTRFA----RVGTKIPELRVGVVDASGEDVHSVTWLPIEFPKDGGYFGEVSWAGNS 243

Query: 224 QKVAYATYDDEDILRVYLM--------DTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +++           R +L+            +           +    +++  GK  +  
Sbjct: 244 EEILVERLSRFRDKREFLLARVDGVVSTIFEETNEAWAVGSHGINSGVKWTDGGKSFVFL 303

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFI-----NISASYSPDSSQIVFESDREGKEQ--L 328
            +KD     +++D        LT   +              D     F +  +   Q  L
Sbjct: 304 SEKDGWRQAFAIDRDGKNERLLTLGDYDIIDRAESGDVVDEDGGWYYFYASPDNGTQRYL 363

Query: 329 YVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDL 360
           + +  +G+   +RI+   +A +    +SP    
Sbjct: 364 FRVPLDGTGTLERITSKDQAGWHSYQFSPDRKW 396



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/337 (13%), Positives = 106/337 (31%), Gaps = 85/337 (25%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--- 217
            IY  +TGE+    S     S   +      S+    R G +IR LT    + L +P   
Sbjct: 88  AIYDVVTGERTVATSVAEITSRDPMLSPDGTSVLKKQRRGWDIRNLTSGETRPLLKPEEA 147

Query: 218 --------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-------KRIGN------- 255
                    +SP+ +++ +   +  ++    ++       P        R+G        
Sbjct: 148 GDIHYQDLSWSPDGKRILFVESNSNEVRLRNVLVPDDPSYPGVSKTRFARVGTKIPELRV 207

Query: 256 ----------------------FRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSN 292
                                          ++ N +  L+  + +      + +     
Sbjct: 208 GVVDASGEDVHSVTWLPIEFPKDGGYFGEVSWAGNSEEILVERLSRFRDKREFLLARVDG 267

Query: 293 ATERL---TN------TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
               +   TN      +  IN    ++      VF S+++G  Q + +  +G +++ ++ 
Sbjct: 268 VVSTIFEETNEAWAVGSHGINSGVKWTDGGKSFVFLSEKDGWRQAFAIDRDGKNERLLTL 327

Query: 344 ---------------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLL 386
                          D++  ++    SP          +G +  +  +  DG+   ER+ 
Sbjct: 328 GDYDIIDRAESGDVVDEDGGWYYFYASPD---------NGTQRYLFRVPLDGTGTLERIT 378

Query: 387 VED-SNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSI 421
            +D +   +  +SP  +  +      +      L +I
Sbjct: 379 SKDQAGWHSYQFSPDRKWAIHTYSTVNSPPVVDLVTI 415


>gi|228931669|ref|ZP_04094574.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228827962|gb|EEM73691.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 654

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/281 (11%), Positives = 81/281 (28%), Gaps = 54/281 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     +       + P +S + K   
Sbjct: 24  NISDDGKNVAFVKKTANWEDSTYRNHVWIYEKGKGQSYPLTTGDIDSIHPFWSPDSKSIA 83

Query: 274 ISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE------- 323
                 +      I+   L   +  ++T+      +  ++P      + +  +       
Sbjct: 84  YLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFKWNPTGKGFYYITQSKECEEIKK 143

Query: 324 -----------GKEQ---------LYVMQSNGSDQK------RISQDKEASYFDPVWSPQ 357
                      GKE          +  +  N  +++      +++  K+        S  
Sbjct: 144 RKELYGDFQHVGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTDGKDFYIHGFDISDN 203

Query: 358 GDLIAF----TKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS----- 407
           G  +      +        + ++  +  + + + V+     +  +SP G  + +S     
Sbjct: 204 GKKVVCMATPSLNDHMNGDLYILDVEAGELQQMNVDKLLDGSVCFSPEGNKICYSASIRE 263

Query: 408 ----RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               R    ++  ++Y ++     + L N  +     QW  
Sbjct: 264 KEYYRNHIQESTLEIYDMNTGEVIQPLTNFDSTVMPLQWTA 304



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 9/106 (8%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPS 400
           +      S  G  +AF K +        +  + + +K  G    L   D +   P WSP 
Sbjct: 19  TLSSTNISDDGKNVAFVKKTANWEDSTYRNHVWIYEKGKGQSYPLTTGDIDSIHPFWSPD 78

Query: 401 GRSLIF-SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            +S+ + S   DGD  ++++   L+  +E  + +     S+ +W  
Sbjct: 79  SKSIAYLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFKWNP 124



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 11/115 (9%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++ +        ++   +     P WSP   
Sbjct: 22  STNISDDGKNVAFVKKTANWEDSTYRNHVWIYEKGKGQSYPLTT-GDIDSIHPFWSPDSK 80

Query: 360 LIAFTKFSGE---KFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G+   K  I V   D  S+ ++  E   +    W+P+G+   +  + 
Sbjct: 81  SIAYLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFKWNPTGKGFYYITQS 135



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 104/307 (33%), Gaps = 60/307 (19%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDD 233
           + FV ++        +N + + ++ G    Y   + D     P +SP+ + +AY ++  D
Sbjct: 32  VAFVKKTANWEDSTYRNHVWIYEK-GKGQSYPLTTGDIDSIHPFWSPDSKSIAYLSSGGD 90

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
            D+     + +  D +  +I + +  +   +++  GK      Q                
Sbjct: 91  GDMKNQIFVKSLDDYSEVKITDEKEGVSNFKWNPTGKGFYYITQSKECEEIKKRKELYGD 150

Query: 278 ------KDEAMDIYSVDLQS-----------NATERLTNTLFINISAS-YSPDSSQIVFE 319
                 + +   +  ++++            N   +LT+     I     S +  ++V  
Sbjct: 151 FQHVGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTDGKDFYIHGFDISDNGKKVVCM 210

Query: 320 SDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           +     +     LY++     + ++++ DK        +SP+G+ I ++           
Sbjct: 211 ATPSLNDHMNGDLYILDVEAGELQQMNVDKL-LDGSVCFSPEGNKICYSASIREKEYYRN 269

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I  M   G   + L    +   P  W+  G  + +       T   +  +  
Sbjct: 270 HIQESTLEIYDMNT-GEVIQPLTNFDSTVMPLQWTAKGILIRW----QDKTNYFIGLLAE 324

Query: 424 NGRNETL 430
           +G  ETL
Sbjct: 325 DGTVETL 331


>gi|169769711|ref|XP_001819325.1| WD repeat protein [Aspergillus oryzae RIB40]
 gi|83767184|dbj|BAE57323.1| unnamed protein product [Aspergillus oryzae]
          Length = 537

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 69/210 (32%), Gaps = 18/210 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              ++L     + +   RFSP+   +A           V + DT   R         + I
Sbjct: 161 YQQKFLLRGHLRGVSAVRFSPDSTMIA----SGGADGAVKVWDTLTGRLVHTFEGHLAGI 216

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVF 318
               +S +G     S   D+ + ++  ++ +     +            ++SP  + +V 
Sbjct: 217 STISWSPDGAIIA-SGSDDKTIRLW--NVLTGKAHSIPFVGHHNYVYQIAFSPKGNMLVS 273

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E +++     +   R                 G LIA     G    I +   
Sbjct: 274 GSY---DEAVFLWDVRSATVMRSLPAHSDPVGGIDVVWDGTLIASCATDG---LIRIWDT 327

Query: 379 DGSQ-ERLLVEDSNLQAPT--WSPSGRSLI 405
              Q  R LV + N    +  +SP+G+ ++
Sbjct: 328 ATGQCLRTLVHEDNPPVTSVKFSPNGKFVL 357



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 71/196 (36%), Gaps = 15/196 (7%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G    R    S  + SG    ++ V D     + +        +    +SP+   +A  
Sbjct: 172 RGVSAVRFSPDSTMIASGGADGAVKVWDTLTGRLVHTFEGHLAGISTISWSPDGAIIASG 231

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D    +R++ + T    +   +G+  + +    FS  G   + S   DEA+ ++ V  
Sbjct: 232 SDD--KTIRLWNVLTGKAHSIPFVGHH-NYVYQIAFSPKGNMLV-SGSYDEAVFLWDVRS 287

Query: 290 QSNATERLTNTL----FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            +     L         I++   +  D + I   +  +G  +++   + G   + +  + 
Sbjct: 288 AT-VMRSLPAHSDPVGGIDV--VW--DGTLIASCAT-DGLIRIWDT-ATGQCLRTLVHED 340

Query: 346 EASYFDPVWSPQGDLI 361
                   +SP G  +
Sbjct: 341 NPPVTSVKFSPNGKFV 356



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 59/175 (33%), Gaps = 30/175 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G +I  G D   +  RLW+V   K            S   + H   + +YQ     KG  
Sbjct: 225 GAIIASGSDDKTI--RLWNVLTGK----------AHSIPFVGHH--NYVYQIAFSPKG-- 268

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     +VSG    ++ + D   A +    P+    +       +   +A    D 
Sbjct: 269 --------NMLVSGSYDEAVFLWDVRSATVMRSLPAHSDPVGGIDVVWDGTLIASCATDG 320

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKR-ALISVQKDEAMDIYS 286
                + + DT   +  + + +  +  + + +FS NGK     S+     +  Y 
Sbjct: 321 ----LIRIWDTATGQCLRTLVHEDNPPVTSVKFSPNGKFVLAWSLDDCVRLWNYV 371


>gi|326915138|ref|XP_003203877.1| PREDICTED: WD repeat-containing protein 26-like, partial [Meleagris
           gallopavo]
          Length = 503

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT   +  K +      +   
Sbjct: 239 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYI 298

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 299 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 357

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 358 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 406

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 407 --DLTDRNIVQEDHPIMSFTISKNGR 430


>gi|224047254|ref|XP_002197206.1| PREDICTED: similar to WD repeat domain 26 [Taeniopygia guttata]
          Length = 515

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT   +  K +      +   
Sbjct: 202 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYI 261

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 262 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 320

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 321 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 369

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 370 --DLTDRNIVQEDHPIMSFTISKNGR 393


>gi|213621961|ref|ZP_03374744.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 170

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 17  GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 76

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 77  LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGKIDFLTAR 132

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 133 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 170



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 57  PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 114

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 115 --RIACCDAQSGKIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 166



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 41  VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 100

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        +ID    R  N  S   A  FS +G+      + 
Sbjct: 101 WHPSGKWLGLVL--ENRIACCDAQSGKIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 157

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 158 KGFRQLWV 165


>gi|126306893|ref|XP_001367974.1| PREDICTED: similar to WD repeat domain 26, [Monodelphis domestica]
          Length = 514

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT   +  K +      +   
Sbjct: 201 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYI 260

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 261 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 319

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 320 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 368

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 369 --DLTDRNIVQEDHPIMSFTISKNGR 392


>gi|242239486|ref|YP_002987667.1| oligogalacturonide lyase [Dickeya dadantii Ech703]
 gi|242131543|gb|ACS85845.1| Oligogalacturonide lyase [Dickeya dadantii Ech703]
          Length = 388

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 61/173 (35%), Gaps = 24/173 (13%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 ++   +  ++ DG+N+R +   +  +      + P+   + Y +Y      R  
Sbjct: 207 HEGPHDLVDARMWFINEDGSNMRKVKEHAPGESCTHEFWVPDGSALVYVSYLKGATNRFI 266

Query: 241 LMDTRIDRAPKRIGNFR------SMILAPRFSSNGKRALISVQKDEAMDI------YSVD 288
                + +   ++          S         +G  A + V+ D    I      Y  +
Sbjct: 267 CSINPVTQENHQVAEMPPCSHLMSNHDGSLMVGDGCNAPVDVKDDGGYKIENDPFLYVFN 326

Query: 289 LQSNATERLTNTL-FINI----------SASYSPDSSQIVFESDREGKEQLYV 330
           +++    R+        +            S++PD+ QI+F SD +GK  LY+
Sbjct: 327 MKTGRQHRVAQHNTSWEVLEGDRQVTHPHPSFTPDNKQILFTSDVDGKPALYL 379



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 83/245 (33%), Gaps = 33/245 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
               +K+++  +  +D      +   +   P  +   R+      F+S+G + L     D
Sbjct: 1   MAKGKKLSFTFHTYQDSATGTEV---VRLTPPDVICHRNYFYQKCFTSDGSKLLFGGAFD 57

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + Y +DL++    +LT     N    + SP    + +  +      L  +     ++
Sbjct: 58  GPWNYYLLDLKTQQATQLTEGKGDNTFGGFLSPKDDALYYVKN---VRNLMRVDLETLEE 114

Query: 339 KRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFA--------------------IGVM 376
           K I Q  +       W    D   +   +   E +                     I + 
Sbjct: 115 KTIYQVPDEWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFYFTNPCCRLIRID 174

Query: 377 KKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLI--N 432
            + G    +L E+  L  P + P    ++ F  +   D   ++++ I+ +G N   +  +
Sbjct: 175 LQTGEATTILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGSNMRKVKEH 234

Query: 433 TPAYA 437
            P  +
Sbjct: 235 APGES 239



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/230 (11%), Positives = 64/230 (27%), Gaps = 41/230 (17%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MD 283
           +  +   +     +           I      +  P +   +        +         
Sbjct: 158 FQEFYFTNPCCRLIRIDLQTGEATTILQENQWLGHPIYRPGDDNTVAFCHEGPHDLVDAR 217

Query: 284 IYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           ++ ++   +   ++             + PD S +V+ S  +G    ++   N      +
Sbjct: 218 MWFINEDGSNMRKVKEHAPGESCTHEFWVPDGSALVYVSYLKGATNRFICSIN-----PV 272

Query: 342 SQDKEASYFDPVWSP-----QGDLIA-------FTKFSGEKFAI------GVMKK-DGSQ 382
           +Q+       P  S       G L+                + I       V     G Q
Sbjct: 273 TQENHQVAEMPPCSHLMSNHDGSLMVGDGCNAPVDVKDDGGYKIENDPFLYVFNMKTGRQ 332

Query: 383 ERLLVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            R+   +++ +            P+++P  + ++F+   DG     L  I
Sbjct: 333 HRVAQHNTSWEVLEGDRQVTHPHPSFTPDNKQILFTSDVDGKPALYLAKI 382



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 36/253 (14%), Positives = 83/253 (32%), Gaps = 35/253 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F+ +  K+ +     +     YL+D +  +A +              S     
Sbjct: 36  NYFYQKCFTSDGSKLLFGG-AFDGPWNYYLLDLKTQQATQLTEGKGDNTFGGFLSPKDDA 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASY--SPDSSQIV----------- 317
                      ++  VDL++   + +           ++  + D +++V           
Sbjct: 95  LYYVKNV---RNLMRVDLETLEEKTIYQVPDEWVGYGTWVANSDCTKMVGIEIKKEDWKP 151

Query: 318 ------FESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
                 F+         +L  +     +   I Q+ +     P++ P   + +AF     
Sbjct: 152 LTDWKKFQEFYFTNPCCRLIRIDLQTGEATTILQENQW-LGHPIYRPGDDNTVAFCHEGP 210

Query: 369 EKF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DGS  R + E +  ++ T   W P G +L++     G T   + SI+
Sbjct: 211 HDLVDARMWFINEDGSNMRKVKEHAPGESCTHEFWVPDGSALVYVSYLKGATNRFICSIN 270

Query: 423 -LNGRNETLINTP 434
            +   N  +   P
Sbjct: 271 PVTQENHQVAEMP 283


>gi|159125975|gb|EDP51091.1| catabolite degradation protein, putative [Aspergillus fumigatus
           A1163]
          Length = 614

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 70/219 (31%), Gaps = 18/219 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  ++  +FS +  K+            VY+ DT      +++      +    +S
Sbjct: 292 LRQHSDEVWYCQFSHDGSKLV----TAGRDRHVYIYDTSNFSVYRQLEKHEEGVAHVSWS 347

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +  +  I+  +D+   ++SV+        + +      +A ++ D    V  +  +   
Sbjct: 348 PDDSKL-ITCSQDKKARVWSVE-TGRCLLTINHHRQPVTAAVWAADGESFV-TASLDLSS 404

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL- 385
           QL      G      +        D   +P G  +           I V      +E   
Sbjct: 405 QLCHWSMRGD--PLYTWHGGFRVQDCAITPDGRRLIAADVEE---KIHVYDFATHEEEYC 459

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           L   S   + T S   R ++ +  +      ++  IDL+
Sbjct: 460 LPLKSKPTSVTVSRDSRYMLVNLSEG-----QIQLIDLD 493



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 91/278 (32%), Gaps = 25/278 (8%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI-------YQSITGEKGD 172
             +RL +   L +   + QI    + ++       +  + D          +        
Sbjct: 243 PNNRLAI---LLNHVKQNQINRCLYHNTATPPSLYSDHMCDRNDFPLRTGVELRQHSDEV 299

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +  +       +V+      + + D    ++       ++ +    +SP+  K+   + D
Sbjct: 300 WYCQFSHDGSKLVTAGRDRHVYIYDTSNFSVYRQLEKHEEGVAHVSWSPDDSKLITCSQD 359

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +      +      R    I + R  + A  ++++G+   ++   D +  +    ++ +
Sbjct: 360 KK----ARVWSVETGRCLLTINHHRQPVTAAVWAADGES-FVTASLDLSSQLCHWSMRGD 414

Query: 293 ATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                T      +   + +PD  +++  +D E  E+++V      +++     K      
Sbjct: 415 PL--YTWHGGFRVQDCAITPDGRRLI-AADVE--EKIHVYDFATHEEEYCLPLKSKPTSV 469

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            V S     +      G    I ++  D ++     + 
Sbjct: 470 TV-SRDSRYMLVNLSEG---QIQLIDLDTTEVIRRFQG 503


>gi|170115532|ref|XP_001888960.1| WD40-containing domain protein [Laccaria bicolor S238N-H82]
 gi|164636102|gb|EDR00401.1| WD40-containing domain protein [Laccaria bicolor S238N-H82]
          Length = 1560

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 67/208 (32%), Gaps = 19/208 (9%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             D  +   L       +    FS +  +V        D   + + +    +   ++    
Sbjct: 1293 PDSWDPAELIVHNGSAVSSVAFSQDGSRVV----SGLDNSIIQIWNVTTGKLEAKLEGHT 1348

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              + +  FS +G + ++S   D+ + I++V         L     + +S ++S DSS++V
Sbjct: 1349 DQVRSVAFSQDGSQ-VVSGSVDKTVRIWNV-TTGKVEAELKGHTNLVMSVAFSQDSSRVV 1406

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              S     E + +        +   +          +S  G  +  +    E   I    
Sbjct: 1407 SGSV---DETVRIWNVTAGKVEAELKGHTGLVNSVAFSQDGSRVV-SGSDDETVQIW--N 1460

Query: 378  KDGSQER-LLVEDSNLQAPTWSPSGRSL 404
                  + +L  D  L      P G  +
Sbjct: 1461 LTTGNPQPILTSDITL------PDGSRV 1482



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 72/226 (31%), Gaps = 15/226 (6%)

Query: 219  FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            + P    +   Y   D   + +V L         + I +  S + +  FS +G R +   
Sbjct: 1267 WIPKNSLIRKTYTA-DVSRVPKVTLGLPDSWDPAELIVHNGSAVSSVAFSQDGSRVV--- 1322

Query: 277  QKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               +   I   ++ +   E +L        S ++S D SQ+V  S     + + +     
Sbjct: 1323 SGLDNSIIQIWNVTTGKLEAKLEGHTDQVRSVAFSQDGSQVVSGSV---DKTVRIWNVTT 1379

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
               +   +          +S     +  +    E   I  +     +  L      + + 
Sbjct: 1380 GKVEAELKGHTNLVMSVAFSQDSSRVV-SGSVDETVRIWNVTAGKVEAELKGHTGLVNSV 1438

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             +S  G  ++       D   +++++   G  + ++ +     D  
Sbjct: 1439 AFSQDGSRVVSGSD---DETVQIWNL-TTGNPQPILTSDITLPDGS 1480


>gi|70985192|ref|XP_748102.1| catabolite degradation protein [Aspergillus fumigatus Af293]
 gi|66845730|gb|EAL86064.1| catabolite degradation protein, putative [Aspergillus fumigatus
           Af293]
          Length = 374

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 70/219 (31%), Gaps = 18/219 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  ++  +FS +  K+            VY+ DT      +++      +    +S
Sbjct: 52  LRQHSDEVWYCQFSHDGSKLV----TAGRDRHVYIYDTSNFSVYRQLEKHEEGVAHVSWS 107

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +  +  I+  +D+   ++SV+        + +      +A ++ D    V  +  +   
Sbjct: 108 PDDSKL-ITCSQDKKARVWSVE-TGRCLLTINHHRQPVTAAVWAADGESFV-TASLDLSS 164

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL- 385
           QL      G      +        D   +P G  +           I V      +E   
Sbjct: 165 QLCHWSMRGD--PLYTWHGGFRVQDCAITPDGRRLIAADVEE---KIHVYDFATHEEEYC 219

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           L   S   + T S   R ++ +  +      ++  IDL+
Sbjct: 220 LPLKSKPTSVTVSRDSRYMLVNLSEG-----QIQLIDLD 253



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 31/278 (11%), Positives = 91/278 (32%), Gaps = 25/278 (8%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI-------YQSITGEKGD 172
             +RL +   L +   + QI    + ++       +  + D          +        
Sbjct: 3   PNNRLAI---LLNHVKQNQINRCLYHNTATPPSLYSDHMCDRNDFPLRTGVELRQHSDEV 59

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +  +       +V+      + + D    ++       ++ +    +SP+  K+   + D
Sbjct: 60  WYCQFSHDGSKLVTAGRDRHVYIYDTSNFSVYRQLEKHEEGVAHVSWSPDDSKLITCSQD 119

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +      +      R    I + R  + A  ++++G+   ++   D +  +    ++ +
Sbjct: 120 KK----ARVWSVETGRCLLTINHHRQPVTAAVWAADGES-FVTASLDLSSQLCHWSMRGD 174

Query: 293 ATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                T      +   + +PD  +++  +D E  E+++V      +++     K      
Sbjct: 175 PL--YTWHGGFRVQDCAITPDGRRLI-AADVE--EKIHVYDFATHEEEYCLPLKSKPTSV 229

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            V S     +      G    I ++  D ++     + 
Sbjct: 230 TV-SRDSRYMLVNLSEG---QIQLIDLDTTEVIRRFQG 263


>gi|255088553|ref|XP_002506199.1| intraflagellar transport 80 [Micromonas sp. RCC299]
 gi|226521470|gb|ACO67457.1| intraflagellar transport 80 [Micromonas sp. RCC299]
          Length = 831

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 71/214 (33%), Gaps = 13/214 (6%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            ++ R G   R++  +        R++P+   +A    D    L+ +    R       +
Sbjct: 86  RILTRGGRVERHVPDAHRGACVSLRWNPDGTALATCGED--GALKTW---GRNGMLRAVL 140

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
              +  I A  +S +     ++    + + + S D     T R        ++  +SP  
Sbjct: 141 EQLQHAIHAISWSPSCD--AVAAGCGKDLYVKSADPGGRKTIRWKAHDGAVLAVDWSPRG 198

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-- 371
             IV      G++  Y +          S   +       W+P GD+ A   F       
Sbjct: 199 DVIV----SGGEDCRYRVWDAFGRTLYASPTMDHPTTSCAWAPGGDVFAVGSFERAYLCD 254

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             G     G + +L     ++    WSP G +L 
Sbjct: 255 RTGWSSPGGGKCQLADGFGSVFGLAWSPDGTTLA 288



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 61/191 (31%), Gaps = 22/191 (11%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L    R+G  +R +       +    +SP+   VA         L V   D    +  + 
Sbjct: 127 LKTWGRNGM-LRAVLEQLQHAIHAISWSPSCDAVA---AGCGKDLYVKSADPGGRKTIRW 182

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                  +LA  +S  G   ++S  +D    ++  D                 S +++P 
Sbjct: 183 KA-HDGAVLAVDWSPRGD-VIVSGGEDCRYRVW--DAFGRTLYASPTMDHPTTSCAWAPG 238

Query: 313 SSQIVFES-------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
                  S       DR G        S G  + +++ D   S F   WSP G  +A   
Sbjct: 239 GDVFAVGSFERAYLCDRTG------WSSPGGGKCQLA-DGFGSVFGLAWSPDGTTLAGCG 291

Query: 366 FSGEKFAIGVM 376
             G  F  G +
Sbjct: 292 GGGYVFVAGTV 302


>gi|323310124|gb|EGA63318.1| Taf5p [Saccharomyces cerevisiae FostersO]
          Length = 798

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 68/218 (31%), Gaps = 18/218 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +   +      +   + +   D   D   K +      + +  FS + K  L S  +
Sbjct: 493 WSLDGSSL------NNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLL-SGSE 545

Query: 279 DEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D+ + ++S+D  +        N    ++S  +SP        S     +   +   +   
Sbjct: 546 DKTVRLWSMDTHTALVSYKGHNHPVWDVS--FSPLGHYFATASH---DQTARLWSCDHIY 600

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             RI            + P G  + FT  S +   +  +    S    L   + + +   
Sbjct: 601 PLRIFAGHLNDVDCVSFHPNGCYV-FTGSSDKTCRMWDVSTGDSVRLFLGHTAPVXSIAV 659

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            P GR L        D    ++ I   G+    +    
Sbjct: 660 CPDGRWL---STGSEDGIINVWDI-GTGKRLKQMRGHG 693



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 57/179 (31%), Gaps = 14/179 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   ++   FSP+ + +   + D    +R++ MDT       +  N    +    F
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSED--KTVRLWSMDTHTALVSYKGHNHP--VWDVSF 575

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREG 324
           S  G     +   D+   ++S D       R+      ++   S+ P+    VF    + 
Sbjct: 576 SPLGHYFA-TASHDQTARLWSCDHIY--PLRIFAGHLNDVDCVSFHPNGCY-VFTGSSDK 631

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             +++    +  D  R+     A        P G  ++     G    I V      + 
Sbjct: 632 TCRMW--DVSTGDSVRLFLGHTAPVXSIAVCPDGRWLSTGSEDG---IINVWDIGTGKR 685


>gi|296285078|ref|ZP_06863076.1| dipeptidyl aminopeptidase [Citromicrobium bathyomarinum JL354]
          Length = 746

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 56/322 (17%), Positives = 106/322 (32%), Gaps = 66/322 (20%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL-- 237
           V  S            +  DG  +  L    D       +  ++Q   +    D + L  
Sbjct: 40  VFASPGLDGPSPRQAKLSPDGRYLTLLRNRADDRERYDLWGYDRQSGEWTMLVDSEALGS 99

Query: 238 -RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            R    D ++ R   R+GN + + +A +++++G   L+ +  D  + +  +D       R
Sbjct: 100 GRELSEDEKMQRERARVGNLKGI-IAYQWNADGSGVLVPL--DGDLYLAKLD---GTVTR 153

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG---------------SDQKRI 341
           LT+T    ++   SP+   + F  DR    QL+V    G                + + +
Sbjct: 154 LTDTEESELNPKLSPEGEFVSFVRDR----QLWVGPVGGDAQPITPKEGELIRWGEAEFV 209

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFS------------------------------GEKF 371
           +Q++        W+P    +A  +                                    
Sbjct: 210 AQEEMGRMTGFWWNPDDTRLAVQRTDESPVGVVTRAAIGATGTKVFDQRYPVAGSDNAIV 269

Query: 372 AIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDGDTGSKLYSID-LNG 425
            + VM  DG+  R+ V+  +          W+P G +L   R+    T   +  +D   G
Sbjct: 270 ELFVMDPDGAN-RVKVDLGDNPDIYLARVDWAPDGSALYVQRQNREQTRLDMLRVDPATG 328

Query: 426 RNETLINTPAYASDPQWVGFMD 447
            +E      A   D  W+   D
Sbjct: 329 ASEVWFTEEAARPD-YWINLSD 349



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 59/197 (29%), Gaps = 38/197 (19%)

Query: 247 DRAPKRIGNFRSMIL-APR---FSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTN 299
           D   +R+     +   +PR    S +G+   +   +    E  D++  D QS     L +
Sbjct: 34  DLTIERVFASPGLDGPSPRQAKLSPDGRYLTLLRNRADDRERYDLWGYDRQSGEWTMLVD 93

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +  +      S D                         ++R             W+  G 
Sbjct: 94  SEALGSGRELSEDEKM---------------------QRERARVGNLKGIIAYQWNADGS 132

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +           + + K DG+  RL   + +   P  SP G  + F R +      +L+
Sbjct: 133 GVLV----PLDGDLYLAKLDGTVTRLTDTEESELNPKLSPEGEFVSFVRDR------QLW 182

Query: 420 SIDLNGRNETLINTPAY 436
              + G  + +      
Sbjct: 183 VGPVGGDAQPITPKEGE 199



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 77/251 (30%), Gaps = 23/251 (9%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIR 204
           +P   R       +     +T          +F     V+G       L VMD DGAN  
Sbjct: 223 NPDDTRLAVQRTDESPVGVVTRAAIGATGTKVFDQRYPVAGSDNAIVELFVMDPDGANRV 282

Query: 205 YLTPSRDQILFEPR--FSPNQQKVAYATYDDEDILRVYLMDTRI---------DRAPKRI 253
            +    +  ++  R  ++P+   + Y    + +  R+ ++                  R 
Sbjct: 283 KVDLGDNPDIYLARVDWAPDGSAL-YVQRQNREQTRLDMLRVDPATGASEVWFTEEAARP 341

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             + ++    RF  +G   L   ++D     Y  D      ++LT+      S     + 
Sbjct: 342 DYWINLSDNYRFLDDG-SLLWWSERDGYGQFYRFD--GEDWQQLTSGDEPVTSLVGL-NE 397

Query: 314 SQIVFESDREGK---EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
              VF          +Q+Y    +G     +  D            QG  +  ++ S  +
Sbjct: 398 ETGVFFYQATTNVLTQQIYRAPLDGKAGGALLTD-PGFTNSASMDQQGQTLLISRSSPSQ 456

Query: 371 -FAIGVMKKDG 380
                +   DG
Sbjct: 457 PPQSYLADTDG 467


>gi|194902576|ref|XP_001980723.1| GG17291 [Drosophila erecta]
 gi|190652426|gb|EDV49681.1| GG17291 [Drosophila erecta]
          Length = 471

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 83/201 (41%), Gaps = 15/201 (7%)

Query: 225 KVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           K    T   +D+++V+ L +    +   ++      +++   SS+G+    S   D  M 
Sbjct: 192 KDFIVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIA-SSSLDSTMC 250

Query: 284 IYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++  D +S   + L T       +  +SP +  ++     +GK  +Y +++  ++Q   +
Sbjct: 251 LW--DARSGDKKHLLTFGPVDLWTVKFSPCNKYVI-SGLNDGKISMYSVETGKAEQTLDA 307

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPS 400
           Q+ + +     +SP G  IA     G    I +      +    +E   +   +  +SP+
Sbjct: 308 QNGKYTL-SIAYSPDGKYIASGAIDG---IITIFDVAAGKVVQTLEGHAMPVRSLCFSPN 363

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
            + L+ +     D   KLY +
Sbjct: 364 SQMLLTASD---DGHMKLYDV 381



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 58/163 (35%), Gaps = 14/163 (8%)

Query: 164 QSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           Q++  + G +   I +  +   + SG I   + + D     +          +    FSP
Sbjct: 303 QTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSP 362

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N Q +  A+ D      + L D         +    S +L   FS +GK    S   D +
Sbjct: 363 NSQMLLTASDDG----HMKLYDVTHSDVVGTLSGHASWVLCVSFSEDGKHFA-SSSSDNS 417

Query: 282 MDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESD 321
           + I+     ++  + L   T          YSP + ++   S+
Sbjct: 418 VKIW----DTSKRKCLHTFTEHTDQVWGVRYSPGNDKVASASE 456


>gi|153871138|ref|ZP_02000384.1| WD-40 repeat protein [Beggiatoa sp. PS]
 gi|152072396|gb|EDN69616.1| WD-40 repeat protein [Beggiatoa sp. PS]
          Length = 367

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 47/129 (36%), Gaps = 7/129 (5%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +  K +      + A  FS NG+    S   D  + ++ V+        L+ T    ++
Sbjct: 235 TKLSKVLTGHSGDVNAVAFSPNGRIIA-SGSNDNTVKLWEVN-TGKEISTLSETKDDVLT 292

Query: 307 ASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            ++ PD   I       G +Q +++   N +++       E   +   +SP G  +    
Sbjct: 293 VAFHPDGYLIA----AGGNDQTIHLWDINTNEKTGTLVGHEGVIYSIAFSPDGQTLVSGS 348

Query: 366 FSGEKFAIG 374
           +      +G
Sbjct: 349 WDKNGETLG 357



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 6/115 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +    FSPN + +A  + D+     V L +    +    +   +  +L   F
Sbjct: 240 VLTGHSGDVNAVAFSPNGRIIASGSNDN----TVKLWEVNTGKEISTLSETKDDVLTVAF 295

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
             +G   + +   D+ + ++ ++        L     +  S ++SPD   +V  S
Sbjct: 296 HPDG-YLIAAGGNDQTIHLWDINTNEKTGT-LVGHEGVIYSIAFSPDGQTLVSGS 348



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 46/117 (39%), Gaps = 4/117 (3%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           L +  ++ LT       + ++SP+   I   S+      + + + N   +     + +  
Sbjct: 233 LPTKLSKVLTGHSGDVNAVAFSPNGRIIASGSN---DNTVKLWEVNTGKEISTLSETKDD 289

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                + P G LIA    + +   +  +  +     L+  +  + +  +SP G++L+
Sbjct: 290 VLTVAFHPDGYLIA-AGGNDQTIHLWDINTNEKTGTLVGHEGVIYSIAFSPDGQTLV 345



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 39/109 (35%), Gaps = 5/109 (4%)

Query: 166 ITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           +TG  GD N+     +  +  SG   N++ + + +              +    F P+  
Sbjct: 241 LTGHSGDVNAVAFSPNGRIIASGSNDNTVKLWEVNTGKEISTLSETKDDVLTVAFHPDGY 300

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +A       +   ++L D   +     +     +I +  FS +G+  +
Sbjct: 301 LIA----AGGNDQTIHLWDINTNEKTGTLVGHEGVIYSIAFSPDGQTLV 345


>gi|73966905|ref|XP_868011.1| PREDICTED: similar to WD SOCS-box protein 1 isoform 2 isoform 4
           [Canis familiaris]
          Length = 275

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 61/178 (34%), Gaps = 28/178 (15%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            F+ +G   L+S  +D+ + ++ +    N  + L        S ++SPDSS +       
Sbjct: 31  TFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLC---SVG 87

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + +++   +     R  +          +SP G L+A   +      + +        
Sbjct: 88  ASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALLATASYDT---RVYIWDPHNGD- 143

Query: 384 RLLVEDSNLQAP-----------------TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +L+E  +L  P                 ++S  G  +        D   + + ID +
Sbjct: 144 -ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVA---SLADDKMVRFWRIDED 197



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 65/202 (32%), Gaps = 27/202 (13%)

Query: 185 VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VS     +L V D +D  N+  +       ++   FSP+   +            V+L +
Sbjct: 41  VSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSMLCSV----GASKAVFLWN 96

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---------- 293
                  +++      ++A  FS +G     +   D  + I+  D  +            
Sbjct: 97  MDKYTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFP 153

Query: 294 -TERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
               +      +    S S+S D   +   +D +   + + +  +     +++       
Sbjct: 154 PPTPIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG-- 208

Query: 350 FDPVWSPQGDLIAFTKFSGEKF 371
               +S  G ++A     G  +
Sbjct: 209 LCCAFSTDGSVLAAGTHDGSVY 230


>gi|88803618|ref|ZP_01119143.1| putative dipeptidyl peptidase [Polaribacter irgensii 23-P]
 gi|88780630|gb|EAR11810.1| putative dipeptidyl peptidase [Polaribacter irgensii 23-P]
          Length = 742

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/275 (15%), Positives = 94/275 (34%), Gaps = 56/275 (20%)

Query: 214 LFEPRFSPNQQKVAYA--------TYDDEDILRVYLMDTRIDRAPKRIGNF-----RSMI 260
           + EP FSP+  K+AYA           + +       D   ++    I ++        +
Sbjct: 148 IQEPTFSPDSNKIAYAKNNNLFVLNLTNGNTSTQITTDGTFNKIINGITDWVYEEEFGFV 207

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDL------------------------------- 289
            A  +S N K        +  +  +S+DL                               
Sbjct: 208 RAFEWSKNSKYIAFLRFDESNVPTFSMDLVGEDNYPEQQVFKYPKAGEKNAEVTLHVYTV 267

Query: 290 QSNATERLTNTLFINISAS--YSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDK 345
            S +T+R++            +S D+  +V    +  +   +L+ + ++ S    +  + 
Sbjct: 268 SSKSTKRISLG-AYEYIPRIKWSNDAVTLVATTLNRHQNNLKLHKVDASKSTATLLLNET 326

Query: 346 EASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS- 400
           + +Y D      +      I +T  +     I      G     + +        +  + 
Sbjct: 327 DKAYLDITDNLTFLDDNSFI-WTSENDGFNHIYHYDFYGKLINQITKGDWEITNYYGYNK 385

Query: 401 GRS-LIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           G+  + +   ++G T   ++SI L+G N+ L+++P
Sbjct: 386 GKKTIYYQSVENGSTNRSVFSIQLDGNNKKLLSSP 420



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 91/251 (36%), Gaps = 25/251 (9%)

Query: 202 NIRYLTPSRDQILFEPRFS---------PNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           N +Y+   R      P FS         P QQ   Y    +++      + T   ++ KR
Sbjct: 215 NSKYIAFLRFDESNVPTFSMDLVGEDNYPEQQVFKYPKAGEKNAEVTLHVYTVSSKSTKR 274

Query: 253 IGNFRSMILAPR--FSSNGKRALISV--QKDEAMDIYSVDLQSNATERL---TNTLFIN- 304
           I +  +    PR  +S++    + +   +    + ++ VD   +    L   T+  +++ 
Sbjct: 275 I-SLGAYEYIPRIKWSNDAVTLVATTLNRHQNNLKLHKVDASKSTATLLLNETDKAYLDI 333

Query: 305 -ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + ++  D+S  ++ S+ +G   +Y     G    +I++          ++     I +
Sbjct: 334 TDNLTFLDDNS-FIWTSENDGFNHIYHYDFYGKLINQITKGDWEITNYYGYNKGKKTIYY 392

Query: 364 TKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS- 420
                     ++  ++ DG+ ++LL         ++S +     F           +YS 
Sbjct: 393 QSVENGSTNRSVFSIQLDGNNKKLLSSPKGTNTASFSKNLNY--FINTHSTSEIPPIYSL 450

Query: 421 IDLNGRNETLI 431
           I   G    +I
Sbjct: 451 ITAEGEILQII 461



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 102/304 (33%), Gaps = 55/304 (18%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD--QIL 214
           T S +   S+    GDF + +L V  +  + + K S   +++    +  +  S +  +I 
Sbjct: 45  TFSPEKMNSLNSMNGDFYA-LLNVDTTGNTTVDKYSYKTLEK----VETIVNSANLKEIN 99

Query: 215 FEPRFSPNQQKV-AYATYDDEDILRVYLMDTRIDRA--PKRIGNFRSMILAPRFSSNGKR 271
               +S N+Q+       D + I R     T        K++      I  P FS +  +
Sbjct: 100 RFSSYSFNEQESSLILGTDFKKIYRHSFTGTFYYYQIASKKLILIGKDIQEPTFSPDSNK 159

Query: 272 ALISVQKDEAMDIYSVDL-QSNATERLTNTLFIN------------------ISASYSPD 312
              +    +  +++ ++L   N + ++T     N                   +  +S +
Sbjct: 160 IAYA----KNNNLFVLNLTNGNTSTQITTDGTFNKIINGITDWVYEEEFGFVRAFEWSKN 215

Query: 313 SSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S  I F    E     + M   G D   ++++ +  +A   +   +              
Sbjct: 216 SKYIAFLRFDESNVPTFSMDLVGEDNYPEQQVFKYPKAGEKNAEVT-------------- 261

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              + V        + +   +    P   WS    +L+ +         KL+ +D +   
Sbjct: 262 ---LHVYTVSSKSTKRISLGAYEYIPRIKWSNDAVTLVATTLNRHQNNLKLHKVDASKST 318

Query: 428 ETLI 431
            TL+
Sbjct: 319 ATLL 322



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 46/108 (42%), Gaps = 16/108 (14%)

Query: 333 SNGSDQKRISQDKEASYFDPVWS----PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            N ++ K I++    S+ +   S         I    F+G  +   +     + ++L++ 
Sbjct: 90  VNSANLKEINRFSSYSFNEQESSLILGTDFKKIYRHSFTGTFYYYQI-----ASKKLILI 144

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPA 435
             ++Q PT+SP    + +++       + L+ ++L NG   T I T  
Sbjct: 145 GKDIQEPTFSPDSNKIAYAKN------NNLFVLNLTNGNTSTQITTDG 186


>gi|86131512|ref|ZP_01050110.1| dipeptidyl aminopeptidase IV [Dokdonia donghaensis MED134]
 gi|85817957|gb|EAQ39125.1| dipeptidyl aminopeptidase IV [Dokdonia donghaensis MED134]
          Length = 729

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 89/299 (29%), Gaps = 82/299 (27%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR------ 257
           R LT   D ++ EP FSP+ +K+AY          +++ D       +   + +      
Sbjct: 131 RKLTKVSDDLIQEPTFSPDGKKIAY-----GKDNNLFVFDIASGATQQLTTDGKKNSIIN 185

Query: 258 -----------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                        + A  +S++ K+       +  +  +S+D+  N   + T T+F    
Sbjct: 186 GITDWVYEEEFGFVRAFDWSADSKKIAYIRFDESEVPEFSMDVYGNKLYQ-TQTVF---- 240

Query: 307 ASYSPDSSQIVFESDR-----EGKEQ------LYVMQSNGSDQKRISQDKEASYF----- 350
             Y          S R      G  +      + +  + G    RIS  K+ +       
Sbjct: 241 -KYPKAGEPNAKVSLRLHNLDTGNSRKAKDVEINLRDNAGYYIPRISWSKDPNVLSVQTL 299

Query: 351 -----------------------------------DPVWSPQGDLIAFTKFSGEKFAIGV 375
                                              +  +      I +T        I  
Sbjct: 300 NRHQDTLKLSLFNASTYQTTLAVLETDKAYVDVTDNLTFLDDNSFI-WTSEKDGWNHIYH 358

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSG--RSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              DGS +  +   +      +      + + +   ++G     +Y+I LNG+ +  + 
Sbjct: 359 HNADGSLKNQVTSGNWEVTGYYGYDAGTKRIFYQSSENGSINRGVYAIGLNGKKKQALA 417



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/124 (11%), Positives = 46/124 (37%), Gaps = 6/124 (4%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D +  ++ S+++G   +Y   ++GS + +++           +      I +        
Sbjct: 340 DDNSFIWTSEKDGWNHIYHHNADGSLKNQVTSGNWEVTGYYGYDAGTKRIFYQSSENGSI 399

Query: 372 A--IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL--NGRN 427
              +  +  +G +++ L +     +  +S +     F       T    ++++   +G+ 
Sbjct: 400 NRGVYAIGLNGKKKQALADKEGTNSADFSAN--YSNFIHTYSNTTTPYRFTLNSAKDGKQ 457

Query: 428 ETLI 431
             +I
Sbjct: 458 IRVI 461



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 24/127 (18%)

Query: 322 REGKEQLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLI--------AFTKFSGEK 370
           R G   +Y   +    +  +S    D    +    +S     +         F + +  +
Sbjct: 63  RTGSVDIYSYDTGKKVRTAVSSADIDGLDYFISYEFSDDEQQVLLSTKLQSIFRRSTLGE 122

Query: 371 FAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           + +       +  R L    D  +Q PT+SP G+ + + +       + L+  D+     
Sbjct: 123 YYVW-----STLSRKLTKVSDDLIQEPTFSPDGKKIAYGKD------NNLFVFDIASGAT 171

Query: 429 TLINTPA 435
             + T  
Sbjct: 172 QQLTTDG 178


>gi|327539900|gb|EGF26502.1| serine/threonine-protein kinase [Rhodopirellula baltica WH47]
          Length = 1072

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 81/242 (33%), Gaps = 22/242 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ Q       +      + +           +      + +  FSS+GK       
Sbjct: 510 AISPDNQFFLTGLNESIGFCPIKVYRIDTGEEVLGLLGHWHSMESGTFSSDGKLIA---T 566

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D    +   D+     + L +    N S ++  DS ++V+  +RE + +L V+     +
Sbjct: 567 ADRYRQVQVHDMDGKVVKSL-DATTRNESLAFLEDSHRLVYVYEREPQRELRVLDLETGE 625

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAP 395
              I  D   + F     PQG   AF   +    A+ V     S   + ++      +  
Sbjct: 626 HTVIPTDVTVAQFAFS-QPQGKEKAFRIVAQGYGALSVSDFGQSAPFVELDSFSATFRCV 684

Query: 396 TWSPSGRSLIFS--------------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             S  G SLI+S              R         L     NGR   ++  P  A+ P+
Sbjct: 685 AISDDG-SLIYSGTDEGAAYVWRLKDRDHANQLFRPLVVPAANGRIYDIVALPGQATTPR 743

Query: 442 WV 443
           +V
Sbjct: 744 FV 745



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 73/232 (31%), Gaps = 24/232 (10%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V   D              +    FS + + +A  T D    ++V+ MD ++ ++   
Sbjct: 531 IKVYRIDTGEEVLGLLGHWHSMESGTFSSDGKLIA--TADRYRQVQVHDMDGKVVKSLDA 588

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                S+     F  +  R +   +++   ++  +DL++     +   + +   A   P 
Sbjct: 589 TTRNESL----AFLEDSHRLVYVYEREPQRELRVLDLETGEHTVIPTDVTVAQFAFSQPQ 644

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +  F    +G   L V     S          A++     S  G LI      G  + 
Sbjct: 645 GKEKAFRIVAQGYGALSVSDFGQSAPFVELDSFSATFRCVAISDDGSLIYSGTDEGAAYV 704

Query: 373 IGVMKKD---------------GSQERLLVEDSNLQAPTW---SPSGRSLIF 406
             +  +D               G    ++        P +   +  G+ +++
Sbjct: 705 WRLKDRDHANQLFRPLVVPAANGRIYDIVALPGQATTPRFVTAAEDGKVVLW 756



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 71/204 (34%), Gaps = 9/204 (4%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +         L       +   +    S       S++GK  L+S  +D +  ++ VDLQ
Sbjct: 436 FGTNRFAFELLNYLASPPSSTLLTQHDSPATGIAVSNDGK-LLVSAGEDGS--VHVVDLQ 492

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASY 349
           +N               + SPD+   +   +   G   + V + +  ++         S 
Sbjct: 493 TNQRLHQYQLPGRLDCIAISPDNQFFLTGLNESIGFCPIKVYRIDTGEEVLGLLGHWHSM 552

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               +S  G LIA    +     + V   DG   + L   +  ++  +      L++  +
Sbjct: 553 ESGTFSSDGKLIA---TADRYRQVQVHDMDGKVVKSLDATTRNESLAFLEDSHRLVYVYE 609

Query: 410 KDGDTGSKLYSIDLNGRNETLINT 433
           ++     +L  +DL     T+I T
Sbjct: 610 REPQR--ELRVLDLETGEHTVIPT 631


>gi|327262663|ref|XP_003216143.1| PREDICTED: WD repeat-containing protein 26-like [Anolis
           carolinensis]
          Length = 710

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT   +  K +      +   
Sbjct: 397 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYI 456

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 457 AWSPDDSYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 515

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 516 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 564

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 565 --DLTDRNIVQEDHPIMSFTISKNGR 588


>gi|254517243|ref|ZP_05129300.1| putative dipeptidyl peptidase [gamma proteobacterium NOR5-3]
 gi|219674081|gb|EED30450.1| putative dipeptidyl peptidase [gamma proteobacterium NOR5-3]
          Length = 742

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 64/183 (34%), Gaps = 36/183 (19%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR----SMILAPRFSSNGKRA 272
           P+++P+ Q+ A+   D     R   + +   +  +R+ + +    S      + S+ K  
Sbjct: 71  PKWAPDSQRFAFTWNDKGLPDRELWLASASGKELRRLSSPQFTLYSSTRDFAWRSDSKSI 130

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVM 331
           L+        +++ +++  +  +RL + L   +S    +PD  ++ F  D +    L++ 
Sbjct: 131 LL----LRGNELWQLNIDDSRAQRLGD-LGPGVSHIGLAPDDQKLAFLKDGD----LWIF 181

Query: 332 QSNGSDQKRISQD--------------------KEASYFDP--VWSPQGDLIAFTKFSGE 369
             N    + I+                          +  P   WSP    IA       
Sbjct: 182 DLNNKKARAITDVGVPGLSALSIGRYNRPEREIGPGIWGGPTYAWSPDSQTIAVHLVDRR 241

Query: 370 KFA 372
           +  
Sbjct: 242 QMR 244



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 85/257 (33%), Gaps = 46/257 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRV------------------YLMDTRIDRAPKRIGNFRS- 258
            +SP+ Q +A    D   + +V                  Y  D    R    I   +  
Sbjct: 225 AWSPDSQTIAVHLVDRRQMRKVPFPDYLSPETAPNEVRRGYPGDANESRTVGLINLAKGK 284

Query: 259 ------------MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT------ERLTNT 300
                        I+   +SS G   L+ V  D A D +   +            +  + 
Sbjct: 285 LDLLPLKNTSANQIIGFSWSSKG-LLLLDVASDTAEDRWLYTVDGRQRLKEVWHRQRKSR 343

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGD 359
           ++   ++ + P+   IVF SD E +  LY++ + G +   R+     A            
Sbjct: 344 IYTAFASQWHPNGEDIVFLSDLEDRYGLYLITAQGKTRSPRLLSSPNADVLSAPMIAGSG 403

Query: 360 LIAFTKFSGE--KFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            I +T  +    +  + V K      + +      N   P  SP    + F    D    
Sbjct: 404 SIFYTANAPTAAESQVFVSKATVEAAQRVTPLSGHNTGYP--SPDASHVAFVHSND-TRP 460

Query: 416 SKLYSIDLNGRNETLIN 432
           +++Y++D +G+N   + 
Sbjct: 461 AEIYTVDASGKNLQRVT 477



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 57/181 (31%), Gaps = 41/181 (22%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMD--IYSVDLQSNATERLTNTLFINISASYSPDS 313
           F ++  AP+++ + +R   +       D  ++          RL++  F   S++     
Sbjct: 64  FGTVPSAPKWAPDSQRFAFTWNDKGLPDRELWLASASGKELRRLSSPQFTLYSST----- 118

Query: 314 SQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
               + SD +        +L+ +  + S  +R+             +P    +AF K   
Sbjct: 119 RDFAWRSDSKSILLLRGNELWQLNIDDSRAQRLGDLGPG-VSHIGLAPDDQKLAFLKDGD 177

Query: 369 EKFAIGVMKKDGSQERLLVE----------------------DSNLQAPT--WSPSGRSL 404
               + +   +  + R + +                            PT  WSP  +++
Sbjct: 178 ----LWIFDLNNKKARAITDVGVPGLSALSIGRYNRPEREIGPGIWGGPTYAWSPDSQTI 233

Query: 405 I 405
            
Sbjct: 234 A 234



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 71/180 (39%), Gaps = 14/180 (7%)

Query: 194 CVMDRDG-----ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +   DG             SR    F  ++ PN + + + + D ED   +YL+  +   
Sbjct: 322 WLYTVDGRQRLKEVWHRQRKSRIYTAFASQWHPNGEDIVFLS-DLEDRYGLYLITAQGKT 380

Query: 249 APKRIGNFRSMI--LAPRFSSNGKRALISVQKDEAM--DIYSVDLQSNATERLTNTLFIN 304
              R+ +  +     AP  + +G     +     A    ++       A +R+T     N
Sbjct: 381 RSPRLLSSPNADVLSAPMIAGSG-SIFYTANAPTAAESQVFVSKATVEAAQRVTPLSGHN 439

Query: 305 ISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                SPD+S + F  S+     ++Y + ++G + +R++     ++ +  W+ +   ++F
Sbjct: 440 TG-YPSPDASHVAFVHSNDTRPAEIYTVDASGKNLQRVTHSPLEAFEEQQWA-RSRYVSF 497



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 5/54 (9%)

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-----AYASDPQW 442
           AP W+P  +   F+    G    +L+    +G+    +++P     +   D  W
Sbjct: 70  APKWAPDSQRFAFTWNDKGLPDRELWLASASGKELRRLSSPQFTLYSSTRDFAW 123


>gi|238490025|ref|XP_002376250.1| chromosome segregation protein (SepB), putative [Aspergillus flavus
           NRRL3357]
 gi|83770948|dbj|BAE61081.1| unnamed protein product [Aspergillus oryzae]
 gi|220698638|gb|EED54978.1| chromosome segregation protein (SepB), putative [Aspergillus flavus
           NRRL3357]
          Length = 859

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 93/284 (32%), Gaps = 25/284 (8%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                E  D +  I   +ES + G    ++   + +   +  L       + +   S + 
Sbjct: 71  PKTVDEGIDGHMGIGATNESFIMGAEDGTVWQYEIESGRMENLLVRCALPVRDIAVSNDG 130

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +  A A+    D L V ++        K + +         F  +G+   +S   D  + 
Sbjct: 131 EWAAVAS----DELTVKIVKIEDMTKVKYLRDQSKGTKHVTFDPSGRYIAVSCT-DGILY 185

Query: 284 IYSVDLQ--------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           IYS+  +          A  RL           + PD +   F +    ++      S  
Sbjct: 186 IYSLLAEEPELVQKLDGAIRRLEPEDEATSRVVWHPDGT--AFAAAEATRDIAIFSTSEW 243

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
             +K  S           WSP G L+A    +G    + + +    +     +  N+   
Sbjct: 244 KKEKVFSGGHNGDVTAISWSPNGALLA---TAGADGQVLLWETKTQKVLQRYDFPNVINL 300

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSID--LNGRNETLINTPAYA 437
            W PS  SL F+         +L+  D  ++   + L+  P  A
Sbjct: 301 AWHPSNNSLSFTTSDG-----ELFIYDGVVSNEQQPLLQKPLQA 339



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 74/237 (31%), Gaps = 25/237 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++PN +++   T      +R+Y +    +      G    M +          + I   
Sbjct: 43  AYTPNGRRII--TGGSNSAIRIYTVGQDGEPKTVDEGIDGHMGIGAT-----NESFIMGA 95

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +D  +  Y +  +S   E L     + +   + S D       SD      + +++    
Sbjct: 96  EDGTVWQYEI--ESGRMENLLVRCALPVRDIAVSNDGEWAAVASDEL---TVKIVKIEDM 150

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG--------VMKKDGSQERLLVE 388
            + +  +D+        + P G  IA +   G  +           V K DG+  RL  E
Sbjct: 151 TKVKYLRDQSKGTKHVTFDPSGRYIAVSCTDGILYIYSLLAEEPELVQKLDGAIRRLEPE 210

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           D       W P G    F+   +      ++S     + +          +   W  
Sbjct: 211 DEATSRVVWHPDGT--AFAA-AEATRDIAIFSTSEWKKEKVFSGGHNGDVTAISWSP 264


>gi|328886180|emb|CCA59419.1| hypothetical protein SVEN_6133 [Streptomyces venezuelae ATCC 10712]
          Length = 1243

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 67/199 (33%), Gaps = 23/199 (11%)

Query: 201  ANIRYLTPSRDQILFEPR-------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            AN R +T    Q +  PR       FSP+  ++      +E    VY   T   R   R 
Sbjct: 994  ANGRRVTVLAGQGIPSPRIVPAALVFSPDGSRL---YLGEEHGRSVYTWHTDSWRRGPRF 1050

Query: 254  GNFR--SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            G      ++ +   S +G    +         +   D  +     L + L  +++ +++P
Sbjct: 1051 GPDMEVGVVESVAVSPDGAMIAV---GGGIQRVQVWDTATGEP--LGDRLGRSVAVAFTP 1105

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            D   +V      G   L +         R++ D          +P G  +A    +G++ 
Sbjct: 1106 DG-LLVLGGVGAGNPALVLYDPRARRIVRVAPDSGERTVGVAVAPDGRTLA--SVTGDR- 1161

Query: 372  AIGVMKKDGSQERLLVEDS 390
               +   D   ER +    
Sbjct: 1162 --RLQLWDTGLERSITVQG 1178



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 65/463 (14%), Positives = 133/463 (28%), Gaps = 109/463 (23%)

Query: 41   NSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRF 100
                 +P  +   + V + E G  V  ++           +++           +   RF
Sbjct: 737  TDPGKAPTPLPAGRLVGVTESGAPV--MIDA-----GTIRVLTPAGHTAWTVGKE--MRF 787

Query: 101  QDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII-------------------- 140
            +     G + L  GR    G       + +WD++ RK++                     
Sbjct: 788  EAITHDG-RYLAVGRTADRG------RYEVWDLRARKRLSTVAAPAVVGGYIPRVSLSDD 840

Query: 141  GKKFFSSPAS----WRKIAHTI---------------SDDIYQSITGEKGDFNSRILFVS 181
            G+ F  + +S     R   HT+               +  +        G  ++  + + 
Sbjct: 841  GRWFTVATSSVSTFQRTAGHTVYSARSGRREADLPGHAIALGARGRLMAGAGSNGTVTLW 900

Query: 182  ESVVSGIIKNSL-----------------CVMDRDGANIRYLTPSRDQILFEP------- 217
            +   +G +   L                  +   D A    L    D  L          
Sbjct: 901  DRGPAGRLLTRLDAAGAKPYGFGIAARGDTLAVLDAAGRVRLLRRSDGRLLRTVRPAADA 960

Query: 218  ---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APR-------FS 266
                 SP+   +A A        R   ++       +R+       + +PR       FS
Sbjct: 961  FRVALSPDGALLAVAEARGAGWQRNAQVEVFETANGRRVTVLAGQGIPSPRIVPAALVFS 1020

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDR 322
             +G R  +  +   ++  +  D              + +    S + SPD + I      
Sbjct: 1021 PDGSRLYLGEEHGRSVYTWHTDSWRRGPR---FGPDMEVGVVESVAVSPDGAMIAVG--- 1074

Query: 323  EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             G +++ V  +   +      D+        ++P G L+          A+ +      +
Sbjct: 1075 GGIQRVQVWDTATGEP---LGDRLGRSVAVAFTPDG-LLVLGGVGAGNPALVLYDPRARR 1130

Query: 383  ERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               +  DS  +      +P GR+L       GD   +L+   L
Sbjct: 1131 IVRVAPDSGERTVGVAVAPDGRTLA---SVTGDRRLQLWDTGL 1170


>gi|298246199|ref|ZP_06970005.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297553680|gb|EFH87545.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 305

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 74/236 (31%), Gaps = 19/236 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R L  +    +F   +SP  + +A A  D +  L  +          +         L+ 
Sbjct: 2   RRLLDAHSDNIFAVAWSPTGEFLASAGRDSKVHLWHFTSGRLQYTYHEPSTTCF---LSL 58

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFES 320
            +S +G+    +      + ++  D  + + +           A    +SPD   +   S
Sbjct: 59  AWSPDGRYLA-AGSTTGPVFLW--DAATGSDKPQLIYRGHRRFARCLAWSPDGRYLA--S 113

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +  +    + S  S +   +   +   F   WS  G  +A   F G   A      DG
Sbjct: 114 GGDFGDNTVQVWSATSGKLLTTYTAQYRIFSLGWSSDGVYLASASFDGSVHAWSAQ--DG 171

Query: 381 SQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +   +       + A  WSP    L        D    ++S+   G        PA
Sbjct: 172 APVFIYRGHSGPVYALDWSPVHGYLA---SAGEDAEVHIWSVP--GIGHQPAPAPA 222



 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 49/163 (30%), Gaps = 8/163 (4%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--- 305
             + +      I A  +S  G+    S  +D  + ++     ++   + T          
Sbjct: 1   MRRLLDAHSDNIFAVAWSPTGEFLA-SAGRDSKVHLWHF---TSGRLQYTYHEPSTTCFL 56

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S ++SPD   +   S   G   L+   +     + I +          WSP G  +A   
Sbjct: 57  SLAWSPDGRYLAAGST-TGPVFLWDAATGSDKPQLIYRGHRRFARCLAWSPDGRYLASGG 115

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             G+          G           + +  WS  G  L  + 
Sbjct: 116 DFGDNTVQVWSATSGKLLTTYTAQYRIFSLGWSSDGVYLASAS 158



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/221 (12%), Positives = 64/221 (28%), Gaps = 20/221 (9%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--I 260
            + +     +      +SP+ + +A              +      + K +  + +   I
Sbjct: 88  PQLIYRGHRRFARCLAWSPDGRYLA-----SGGDFGDNTVQVWSATSGKLLTTYTAQYRI 142

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +  +SS+G     S   D ++  +S                   +  +SP    +   +
Sbjct: 143 FSLGWSSDGVYLA-SASFDGSVHAWSAQ-DGAPVFIYRGHSGPVYALDWSPVHGYLA-SA 199

Query: 321 DREGKEQLYVMQSNGSDQ--------KRISQDKEASYFDPVWSPQGDLIAFTKFSG--EK 370
             + +  ++ +   G            R+            WSP G+ +A          
Sbjct: 200 GEDAEVHIWSVPGIGHQPAPAPAIIEPRVLSMHTRPVKTLAWSPGGERLASAGEDKLVNV 259

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +     +   +        + ++A  WSP G  L  +   D
Sbjct: 260 YEPFATEPGTTLRSFTEHRAWVRALAWSPDGSCLASASASD 300



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 10/131 (7%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE------DILRVYLMDTRIDRAPK 251
           +DGA   ++       ++   +SP    +A A  D E        +            P+
Sbjct: 169 QDGA-PVFIYRGHSGPVYALDWSPVHGYLASAGEDAEVHIWSVPGIGHQPAPAPAIIEPR 227

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASY 309
            +      +    +S  G+R   S  +D+ +++Y              T       + ++
Sbjct: 228 VLSMHTRPVKTLAWSPGGERLA-SAGEDKLVNVYEPFATEPGTTLRSFTEHRAWVRALAW 286

Query: 310 SPDSSQIVFES 320
           SPD S +   S
Sbjct: 287 SPDGSCLASAS 297


>gi|258569651|ref|XP_002543629.1| transcriptional repressor rco-1 [Uncinocarpus reesii 1704]
 gi|237903899|gb|EEP78300.1| transcriptional repressor rco-1 [Uncinocarpus reesii 1704]
          Length = 578

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 51/334 (15%), Positives = 107/334 (32%), Gaps = 50/334 (14%)

Query: 112 VTGRVIKEGKDRLRV-----EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           V   V      +          +++DV   + +   +  ++         ++        
Sbjct: 277 VVCCVKFSSDGKYVATGCNRSAQIFDVASGQLVTTLQDETANKEGDLYIRSVC------- 329

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
               G F            +G     + V D     IR++    +  ++   +S N + +
Sbjct: 330 FSPDGKFL----------ATGAEDRQIRVWDIANRKIRHIFAGHENDIYSLDYSRNGRYI 379

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A  + D      V + D   D   + I      +     S +G+    +   D ++ ++ 
Sbjct: 380 ASGSGDK----TVRMWDV-YDGKQELILTIEDGVTTVAISPDGRYVA-AGSLDRSVRVW- 432

Query: 287 VDLQSNAT-ERLTN---TLFINISASYSPDSSQIVFES--------DREGKEQLYVMQSN 334
            D  +    ERL +         S +++P+   +V  S        +      +    + 
Sbjct: 433 -DTTTGYLVERLESPDGHRDSVYSVAFAPNGRDLVSGSLDKTIKMWELTPPRGIMTGNAP 491

Query: 335 -GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            G    R  +  +       ++P G  +             VM   G  + +L    N  
Sbjct: 492 KGGKCVRTFEGHKDFVLSVCFTPDGHWVLSGSKDRGVQFWDVM--TGHAQMMLQGHKNSV 549

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           AP  SP+G+  +F+    GD  +K++S    GR 
Sbjct: 550 AP--SPTGQ--LFATG-SGDCRAKIWSYGPWGRR 578



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 60/196 (30%), Gaps = 20/196 (10%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERL---TNTLFIN---ISA 307
           +  S++   +FSS+GK                 D+ S      L   T     +    S 
Sbjct: 273 SHNSVVCCVKFSSDGKYVA----TGCNRSAQIFDVASGQLVTTLQDETANKEGDLYIRSV 328

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD     F +      Q+ V        + I    E   +   +S  G  IA     
Sbjct: 329 CFSPDGK---FLATGAEDRQIRVWDIANRKIRHIFAGHENDIYSLDYSRNGRYIASGSGD 385

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                  V   DG QE +L  +  +     SP GR +        D   +++     G  
Sbjct: 386 KTVRMWDVY--DGKQELILTIEDGVTTVAISPDGRYVAAGSL---DRSVRVWDT-TTGYL 439

Query: 428 ETLINTPAYASDPQWV 443
              + +P    D  + 
Sbjct: 440 VERLESPDGHRDSVYS 455


>gi|114571593|ref|YP_758273.1| peptidase S9 prolyl oligopeptidase [Maricaulis maris MCS10]
 gi|114342055|gb|ABI67335.1| glutamyl peptidase, Serine peptidase, MEROPS family S09D
           [Maricaulis maris MCS10]
          Length = 815

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 3/83 (3%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           L ++     +++ +S   +A      WSP G  IAF     ++ ++ V+  + ++ R LV
Sbjct: 99  LSLVDLESGEEREVSLPADAGISSTSWSPDGSQIAFVMTRNDQLSLWVVDVERARARELV 158

Query: 388 EDSNLQAPT---WSPSGRSLIFS 407
           +       +   W P G  L+ S
Sbjct: 159 DGGINAVFSPLGWMPDGERLLVS 181



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 4/90 (4%)

Query: 284 IYSVDLQSNATER--LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           +  VDL+S       L     I  S S+SPD SQI F   R  +  L+V+    +  + +
Sbjct: 99  LSLVDLESGEEREVSLPADAGI-SSTSWSPDGSQIAFVMTRNDQLSLWVVDVERARAREL 157

Query: 342 SQDKEASYFDPV-WSPQGDLIAFTKFSGEK 370
                 + F P+ W P G+ +  +    E+
Sbjct: 158 VDGGINAVFSPLGWMPDGERLLVSLVDPER 187



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 76/211 (36%), Gaps = 18/211 (8%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            +    ++ + L+D       +      + I +  +S +G +    + +++ + ++ VD+
Sbjct: 90  RHGPRSVIGLSLVDLESGEEREVSLPADAGISSTSWSPDGSQIAFVMTRNDQLSLWVVDV 149

Query: 290 QSNATERLTNTLFINISAS---YSPDSSQ-IVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           +      L +   IN   S   + PD  + +V   D E        +       + +   
Sbjct: 150 ERARARELVDG-GINAVFSPLGWMPDGERLLVSLVDPERGPMPERPRVPSGPVTQEASGY 208

Query: 346 EASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGR 402
           EA    +  + + + D   F   +  +  + ++   G ++ R + E     +   +P G 
Sbjct: 209 EAPVRTYQDLLADEHDAALFAWLATSQ--LALVNTTGRTRVREVGEPGLYYSAEPAPGGD 266

Query: 403 SLIFSRKKDG--------DTGSKLYSIDLNG 425
            ++    +              +++  DL+G
Sbjct: 267 YILIGEMEQPFSFQVPWYSFPDRVFVTDLDG 297



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 94/271 (34%), Gaps = 34/271 (12%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L ++D +    R ++   D  +    +SP+  ++A+      D L ++++D    RA + 
Sbjct: 99  LSLVDLESGEEREVSLPADAGISSTSWSPDGSQIAFV-MTRNDQLSLWVVDVERARAREL 157

Query: 253 IGNFRSMILAP-RFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +    + + +P  +  +G+R L+S+   +         + S    +  +     +  +Y 
Sbjct: 158 VDGGINAVFSPLGWMPDGERLLVSLVDPERGPMPERPRVPSGPVTQEASGYEAPVR-TYQ 216

Query: 311 ------PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
                  D++   + +      QL ++ + G  + R    +   Y+    +P GD I   
Sbjct: 217 DLLADEHDAALFAWLA----TSQLALVNTTGRTRVR-EVGEPGLYYSAEPAPGGDYILIG 271

Query: 365 KFSGE----------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK---KD 411
           +                 + V   DG +   +            P G  +   R    + 
Sbjct: 272 EMEQPFSFQVPWYSFPDRVFVTDLDGDEIATIARQPLADNV---PIGGVVTGRRSINWQA 328

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                 +++  L+G +  +    A   D  W
Sbjct: 329 SHPARLIWAEALDGGDPRV---EADERDSAW 356


>gi|90409732|ref|ZP_01217749.1| hypothetical protein P3TCK_03176 [Photobacterium profundum 3TCK]
 gi|90329085|gb|EAS45342.1| hypothetical protein P3TCK_03176 [Photobacterium profundum 3TCK]
          Length = 970

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 87/222 (39%), Gaps = 24/222 (10%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +    G   SRI+    +   G   N L     +G  IR     R + +   R+  N ++
Sbjct: 375 LHPIGGLVVSRII----NYTDGRQINDLFRYQDNGW-IRLTERQRFRKV---RWMLNGRQ 426

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMD- 283
           +  A+     +  ++L+D +           +  +L     S  G   + S+++      
Sbjct: 427 LL-ASRKINGLSELWLIDLQNSHTSLVWRGEQGDVLGGFDISPTGDFVVASMKRPHQGWN 485

Query: 284 --------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                   + + +L     + LT+T     S  Y PD  +I + +D EG   ++V+  N 
Sbjct: 486 LERLPITALQTDNLLDIDWQPLTDTKATENSPVYLPDG-RIAYSADYEGVYNIFVIAPNS 544

Query: 336 SDQKRISQDKEASYFDPVWSPQ-GDLIAFTKFSGEKFAIGVM 376
            +  + +++   + F P W P  G  +A+  +  + + + V+
Sbjct: 545 GEVMQWTREIGGA-FQPQWQPYLG--LAYQAYDTDGYHLKVI 583



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 54/333 (16%), Positives = 115/333 (34%), Gaps = 60/333 (18%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           F+LWD    +Q    ++ +     R++A        Q++TG     N  +   +      
Sbjct: 288 FQLWDDF--QQDFEIRYDT---QIRELAQ-------QAVTGRDIAINPYLQVTTP----- 330

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRF--------------SPNQQKVAYATYDD 233
              + L V  ++G +   ++   + +  E ++               P    V     + 
Sbjct: 331 -GYHGLLVTRKNGEDRAVISRLNNSVQPEDKWQNITNTKGVTALDLHPIGGLVVSRIINY 389

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            D  ++  +    D    R+   R      R+  NG++ L S + +   +++ +DLQ++ 
Sbjct: 390 TDGRQINDLFRYQDNGWIRLTE-RQRFRKVRWMLNGRQLLASRKINGLSELWLIDLQNSH 448

Query: 294 TERLTNTLFINISASY--SPDSSQIV---------FESDREGKEQLYVMQSNGSDQKRIS 342
           T  +      ++   +  SP    +V         +  +R     L        D + ++
Sbjct: 449 TSLVWRGEQGDVLGGFDISPTGDFVVASMKRPHQGWNLERLPITALQTDNLLDIDWQPLT 508

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSG 401
            D +A+   PV+ P G  IA++      + I V+  +  +      +      P W P  
Sbjct: 509 -DTKATENSPVYLPDGR-IAYSADYEGVYNIFVIAPNSGEVMQWTREIGGAFQPQWQP-- 564

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                        G    + D +G +  +I  P
Sbjct: 565 -----------YLGLAYQAYDTDGYHLKVIEQP 586


>gi|86738992|ref|YP_479392.1| WD-40 repeat-containing protein [Frankia sp. CcI3]
 gi|86565854|gb|ABD09663.1| WD-40 repeat-containing protein [Frankia sp. CcI3]
          Length = 994

 Score = 57.3 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 70/232 (30%), Gaps = 20/232 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK---RIGNFRSMILAP 263
             SR   +    FSP+ + +A           V L D    +  +    +    S I + 
Sbjct: 738 LASRGDPVTSVAFSPDGRILAV----GGANATVVLWDVTEGQHRRIDPPLTGQHSGITSV 793

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIVFESD 321
            FS + +    +      +     D          N      +   ++SPD       + 
Sbjct: 794 TFSPDSRNLDATGVDGTVLRWDVTDPDRPQLRGRVNAAAALPTPWDAFSPDGRLRA--TG 851

Query: 322 REGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           ++G   L  V   +      I            +SP G ++A     G    + +     
Sbjct: 852 QDGSIMLADVTAPDRPRPPSILLADPGPVRAVAFSPHGQVLAAV---GSGRRVWLWDTSV 908

Query: 381 SQER-----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           +  R     L     ++ +  +SP G +L            +L +ID   RN
Sbjct: 909 TPPRQIGQPLTGHTRSVLSLAFSPDGGTLASGGNDGTVRLWRLAAIDAFRRN 960



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 68/197 (34%), Gaps = 24/197 (12%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER----LTNTLFIN 304
            P  + +    + +  FS +G+   +         +   D+      R    LT      
Sbjct: 734 DPNPLASRGDPVTSVAFSPDGRILAV---GGANATVVLWDVTEGQHRRIDPPLTGQHSGI 790

Query: 305 ISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDP----VWSPQGD 359
            S ++SPDS  +    D  G +  +        D+ ++     A+   P     +SP G 
Sbjct: 791 TSVTFSPDSRNL----DATGVDGTVLRWDVTDPDRPQLRGRVNAAAALPTPWDAFSPDGR 846

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           L A T   G      V   D  +    LL +   ++A  +SP G+ L         +G +
Sbjct: 847 LRA-TGQDGSIMLADVTAPDRPRPPSILLADPGPVRAVAFSPHGQVLA-----AVGSGRR 900

Query: 418 LYSIDLNGRNETLINTP 434
           ++  D +      I  P
Sbjct: 901 VWLWDTSVTPPRQIGQP 917



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 82/243 (33%), Gaps = 44/243 (18%)

Query: 50  IAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQ--KITNPDSIPRFQDWNSLG 107
           +AF+    I  +GG  + VV  D+        I      Q   IT+    P  ++ ++ G
Sbjct: 748 VAFSPDGRILAVGGANATVVLWDVTE-GQHRRIDPPLTGQHSGITSVTFSPDSRNLDATG 806

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
                 G V++            WDV D  +   +   ++ A+        S D     T
Sbjct: 807 VD----GTVLR------------WDVTDPDRPQLRGRVNAAAALPTPWDAFSPDGRLRAT 850

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           G+ G     I+    +        S+ + D                +    FSP+ Q +A
Sbjct: 851 GQDG----SIMLADVTAPDRPRPPSILLADP-------------GPVRAVAFSPHGQVLA 893

Query: 228 YATYDDEDILRVYLMDTRID---RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
                     RV+L DT +    +  + +      +L+  FS +G     S   D  + +
Sbjct: 894 ----AVGSGRRVWLWDTSVTPPRQIGQPLTGHTRSVLSLAFSPDGGTLA-SGGNDGTVRL 948

Query: 285 YSV 287
           + +
Sbjct: 949 WRL 951


>gi|312198209|ref|YP_004018270.1| hypothetical protein FraEuI1c_4404 [Frankia sp. EuI1c]
 gi|311229545|gb|ADP82400.1| hypothetical protein FraEuI1c_4404 [Frankia sp. EuI1c]
          Length = 641

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 61/209 (29%), Gaps = 41/209 (19%)

Query: 265 FSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           FS +GK        DE   +D+++ DL +    RLT+          SPD    V    R
Sbjct: 300 FSKDGKEVTYIGYPDESSNIDVFAADLTTGKVRRLTSNPEYTDPIDLSPDGDWTVAMDTR 359

Query: 323 EGKEQLYVMQSNG----------SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               Q ++    G               +  +    +F P+       +         + 
Sbjct: 360 GSDRQEFLAGMRGIPPITDLVTPGAVSSVRNNGTRRFFQPI-------LIDRYGDRGTYQ 412

Query: 373 IGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIF-------------------SRKK 410
              +   G      + D N      P WSP G ++++                   +  +
Sbjct: 413 GQQINAAGDGSPGAINDPNWNGEADPRWSPDGTAVVYWQALATPPACGGANPLTCETSTE 472

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASD 439
            G   ++L       R      T A  SD
Sbjct: 473 PGGRTARLMIATFTSRKPAPAPTVAPISD 501



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 58/178 (32%), Gaps = 11/178 (6%)

Query: 195 VMDRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            +  D A+   LT +R+ I       FS + ++V Y  Y DE                +R
Sbjct: 274 TVYVDPAHPGQLTINRNAISVGELRGFSKDGKEVTYIGYPDESSNIDVFAADLTTGKVRR 333

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + +          S +G   +    +      +   ++      +T+ +     +S   +
Sbjct: 334 LTSNPEYTDPIDLSPDGDWTVAMDTRGSDRQEFLAGMRG--IPPITDLVTPGAVSSVRNN 391

Query: 313 SSQIVFE-------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            ++  F+        DR   +   +  +       I+        DP WSP G  + +
Sbjct: 392 GTRRFFQPILIDRYGDRGTYQGQQINAAGDGSPGAINDPNWNGEADPRWSPDGTAVVY 449


>gi|149063504|gb|EDM13827.1| WD repeat and SOCS box-containing 2, isoform CRA_b [Rattus
           norvegicus]
          Length = 404

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 82/217 (37%), Gaps = 25/217 (11%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ NG   L+S  +D+
Sbjct: 119 PDVSCLILATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDK 176

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 177 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 233

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---- 396
             +  ++S     +SP   L+    +      I      G + R L     L+AP     
Sbjct: 234 KLEGHQSSVVSCDFSPDSALLVTASYDTS--VIMWDPYTGERLRSLHHT-QLEAPVDDSD 290

Query: 397 ----------WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                     +SP G   ++      D   ++++++L
Sbjct: 291 VHMSSLRSVCFSPEG---LYLATVADDRLLRIWALEL 324



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 80/278 (28%), Gaps = 42/278 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT--------------------YDDEDILRVY 240
                         +   FSP+    A++                     ++ +      
Sbjct: 16  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCVVKLVPWPLEEQFIPKGFEAKSRSSKN 75

Query: 241 LMDTRIDRAPKRI---GNFRSMILAPRFSSNGKR---------------ALISVQKDEAM 282
               R     K +        +  +P  S   ++                L +   D  +
Sbjct: 76  DSKGRGSLKEKTLDCGQIVWGLAFSPWPSPPSRKLWLRHHPQVPDVSCLILATGLNDGQI 135

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P+ S I+  + R+   +++ +  +G   + +S
Sbjct: 136 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKHGKQIQVLS 194

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 195 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 252

Query: 403 SLIFSRKKDGDTGSKLYS-IDLNGRNETLINTPAYASD 439
            L+ +           Y+   L   + T +  P   SD
Sbjct: 253 LLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSD 290


>gi|284042893|ref|YP_003393233.1| hypothetical protein Cwoe_1430 [Conexibacter woesei DSM 14684]
 gi|283947114|gb|ADB49858.1| hypothetical protein Cwoe_1430 [Conexibacter woesei DSM 14684]
          Length = 482

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 94/331 (28%), Gaps = 68/331 (20%)

Query: 166 ITGEKGDFNSRILFVSE-----SVVSGIIKNSLC-------VMDRDGANIRYLTPSRDQI 213
           +    G     I +V       S   G  +  +        V   D   I  L   R + 
Sbjct: 22  LLAAGGASADSIAYVKGGDVWLSTPDGARQYQVTFDGGYSTVSQADSGRIAALHGDRIR- 80

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                F P+ + V        +       D     +    G        P  S +G +  
Sbjct: 81  ----TFEPDGKIV--------NADGTTRYDVLTPHSYTMPGTQFRGPFDPAISPDGMKIA 128

Query: 274 ISVQKDEAMDIYSVDLQSN----ATERLTNTLFIN----------------ISASYSPDS 313
            +    +  +  + +  +        + TN +  +                +  S++ D 
Sbjct: 129 YTWYYTQFGETPNCNPSTGCQTVYGRQGTNYISPDGRSPFDKPGYNEQTGWVGPSWNGDG 188

Query: 314 SQIVFESDREGKEQLYVM---QSNGSDQKRISQ-----DKEASYFDPVWSPQGDLIAFTK 365
             ++ +  + G     V     + G     +S+            D   +     + F  
Sbjct: 189 ETLLSDPIQVGNPDAVVHTPGDAAGGLPGALSRWFFDPSAPGGLNDGEMTRDKTKLVFVT 248

Query: 366 FSGEKFAIGVMKKDGSQERLLVE-------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
               +  + + +  G   ++          +  + +P+WSP G++L F+    G     L
Sbjct: 249 GEQRE-TLFLYRAMGGYPQVPQNCYRLEDGNGRVSSPSWSPDGKTLAFA-DAGGVNVLPL 306

Query: 419 --YSID---LNGRNETLINTPAYASDPQWVG 444
             ++ D       +   +  P  AS+P W  
Sbjct: 307 PDFANDCGTPTAEHTKRLLIPG-ASNPDWGP 336


>gi|302383567|ref|YP_003819390.1| peptidase S9B dipeptidylpeptidase IV domain protein [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302194195|gb|ADL01767.1| peptidase S9B dipeptidylpeptidase IV domain protein [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 742

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 49/304 (16%), Positives = 87/304 (28%), Gaps = 88/304 (28%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAP--------------- 263
           SP+ + VA+     +D+  + L         P ++ + R+++                  
Sbjct: 49  SPDGELVAFLRARPDDVSVLDLWAAPTGAGEPFKLIDARALVPDAGELSEAEKARRERMR 108

Query: 264 ---------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                     +   G+  L  ++ D    I+    +     RLT T    I A  SP  +
Sbjct: 109 ISQRGVVEYSWDEQGRYILAPLEGD----IFLASREGGQIRRLTETSADEIDAKVSPRGN 164

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEA----------------SYFDPVWSPQG 358
            + F  D++    L+V+     D+  ++ + E                       WSP  
Sbjct: 165 YVSFVRDQD----LFVVNLATGDETPLTTEGEGLITWATAEFIAQEEMDRDTGYWWSPDE 220

Query: 359 DLIAFTKFSGEKFAI------------------------------GVMKKDGSQERLLVE 388
             IA  +       I                               V     +  R+ V+
Sbjct: 221 RFIAVQRTDESTVDIVPRLDITGGGASVVEQRYPRAGRPNAVVELYVQDV-TAARRVKVD 279

Query: 389 DSNLQA-----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             +          WS  GR+L   R+        L S+D       +I   A  +   WV
Sbjct: 280 LGDNTDIYLARVNWSQDGRTLYVQRQSRDQKRLDLLSVDPTTGASRVI---ASQTSRAWV 336

Query: 444 GFMD 447
              D
Sbjct: 337 ELTD 340



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 73/196 (37%), Gaps = 39/196 (19%)

Query: 250 PKRIGNFRSMIL----APRFSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNTLF 302
           P+R+ +   +          S +G+       + +    +D+++    +    +L +   
Sbjct: 29  PERVFSNPGLNGPVAQGVSLSPDGELVAFLRARPDDVSVLDLWAAPTGAGEPFKLIDARA 88

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +       PD+ ++   S+ E   +         ++ RISQ     Y    W  QG  I 
Sbjct: 89  L------VPDAGEL---SEAEKARR---------ERMRISQRGVVEY---SWDEQGRYI- 126

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSI 421
               +  +  I +  ++G Q R L E S  +     SP G  + F R +D      L+ +
Sbjct: 127 ---LAPLEGDIFLASREGGQIRRLTETSADEIDAKVSPRGNYVSFVRDQD------LFVV 177

Query: 422 DLNGRNETLINTPAYA 437
           +L   +ET + T    
Sbjct: 178 NLATGDETPLTTEGEG 193



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 43/342 (12%), Positives = 105/342 (30%), Gaps = 67/342 (19%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR---- 218
            + +T    D     +    + VS +    L V++    +   LT   + ++        
Sbjct: 144 IRRLTETSADEIDAKVSPRGNYVSFVRDQDLFVVNLATGDETPLTTEGEGLITWATAEFI 203

Query: 219 ------------FSPNQQKVAYATYDD-------------EDILRVYLMDTRIDRAPKRI 253
                       +SP+++ +A    D+                  V     R  R    +
Sbjct: 204 AQEEMDRDTGYWWSPDERFIAVQRTDESTVDIVPRLDITGGGASVVEQRYPRAGRPNAVV 263

Query: 254 GNFRSMILAPR------------------FSSNGKRALISVQKDE--AMDIYSVDLQSNA 293
             +   + A R                  +S +G+   +  Q  +   +D+ SVD  + A
Sbjct: 264 ELYVQDVTAARRVKVDLGDNTDIYLARVNWSQDGRTLYVQRQSRDQKRLDLLSVDPTTGA 323

Query: 294 TERL---TNTLFINISASYSP--DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +  +   T+  ++ ++  + P  D    ++  +  G   LY+  + G   + +++     
Sbjct: 324 SRVIASQTSRAWVELTDDFKPLKDGG-FIWSDESTGWRHLYLYNAAGQKVRALTEGDWPV 382

Query: 349 YFDPVWSPQGDLIAFT-KFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                 +     + F+           +  +  +   G     + E S     +++ +  
Sbjct: 383 QTLDGVNEDTGQVFFSASMRDGAEAPLERRLFTVALTGGAPVAVTETSG----SFNLNDT 438

Query: 403 SLIF-SRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQW 442
           +  + +   D DT  +      +G     I       + P W
Sbjct: 439 ATAYVTTYSDVDTPPQTALYRADGTFVRWIEENKLDETHPFW 480


>gi|182412182|ref|YP_001817248.1| WD-40 repeat-containing serine/threonin protein kinase [Opitutus
           terrae PB90-1]
 gi|177839396|gb|ACB73648.1| serine/threonine protein kinase with WD40 repeats [Opitutus terrae
           PB90-1]
          Length = 997

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 77/233 (33%), Gaps = 21/233 (9%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           SR+        S      L V D          P    I    R+S + + +A AT  D 
Sbjct: 535 SRLAASLYRRDSPAAGYELVVWDTRTGTALARVPGLPWIGHV-RWSADGRWLALATASD- 592

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                       +    R  N    I A  FS +G R  +  ++D  + I+SV   +   
Sbjct: 593 -----VRYGAADNITGLRTLNAGDGINALEFSPDGTRLAV-GREDGLLTIWSV-ADAAKR 645

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDP 352
              T      ++  +  D  ++V      G +    +    S + + S            
Sbjct: 646 TVHTGHEAAILTLQWLDDGRRVV----TGGMDGTCRLWETESARAQSSTAGLWSGQLGSA 701

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSL 404
             S  G L+A T   GE     V+  + +  R L    +L  P  +S +GR L
Sbjct: 702 ALSSDGALLAATGADGE-----VVVMETAGLRPLRHLPSLFLPFAFSANGRWL 749



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 51/153 (33%), Gaps = 15/153 (9%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKD 279
           +  ++A + Y  +     Y +     R    +     +  I   R+S++G+   ++   D
Sbjct: 533 DGSRLAASLYRRDSPAAGYELVVWDTRTGTALARVPGLPWIGHVRWSADGRWLALATASD 592

Query: 280 ---EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
               A D  +          L     IN    +SPD +++      +G   L +     +
Sbjct: 593 VRYGAADNIT------GLRTLNAGDGINA-LEFSPDGTRLA-VGREDG--LLTIWSVADA 642

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            ++ +    EA+     W   G  +      G 
Sbjct: 643 AKRTVHTGHEAAILTLQWLDDGRRVVTGGMDGT 675



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 71/198 (35%), Gaps = 22/198 (11%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              L V ++D       ++  N R ++LA    ++ +  L++    +   + + D+++ A
Sbjct: 454 RGDLSVDVLDLVHGTRQRQ--NARGILLARA--TDQRTLLLAPPDPDNATLMAWDVETQA 509

Query: 294 T-ERLTN----TLFINISASYSPDSSQIVFESDREGKE----QLYVMQS-NGSDQKRISQ 343
              R T        I   A  + D S++     R        +L V  +  G+   R+  
Sbjct: 510 PAFRWTAQALGPNAILSRACLNRDGSRLAASLYRRDSPAAGYELVVWDTRTGTALARV-- 567

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                     WS  G  +A    S  ++       + +  R L     + A  +SP G  
Sbjct: 568 PGLPWIGHVRWSADGRWLALATASDVRYGAA---DNITGLRTLNAGDGINALEFSPDGTR 624

Query: 404 LIFSRKKDGDTGSKLYSI 421
           L   R+   D    ++S+
Sbjct: 625 LAVGRE---DGLLTIWSV 639


>gi|282859684|ref|ZP_06268786.1| dipeptidyl peptidase IV N-terminal domain protein [Prevotella bivia
           JCVIHMP010]
 gi|282587602|gb|EFB92805.1| dipeptidyl peptidase IV N-terminal domain protein [Prevotella bivia
           JCVIHMP010]
          Length = 722

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 49/313 (15%), Positives = 106/313 (33%), Gaps = 51/313 (16%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH + D I   +     D  +R         + +  N L V+D  GA  +        I+
Sbjct: 107 AHKVVDTIELQL-----DVQARDYQYQTHATAYVQDNQLYVVDPLGAEHKLTEDGSADIV 161

Query: 215 FEPR-------------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           +                +SP    +A+   D   +    L+D             ++ I 
Sbjct: 162 YGQSVHRDEFGINGGLFWSPKGNHLAFYRMDQSMVADYPLVDIPELNFTPEEYETKAAIA 221

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIV- 317
           AP          ++ +    + +   DL    T  L      +    + ++SPD + I  
Sbjct: 222 APIKYP------MAGEASHKVTVGVYDLNERKTIYLQTGDPTDRYFTNITWSPDENVIYM 275

Query: 318 FESDREGKEQLYVMQSN---GSDQKRISQDKEASYFDPV-------WSPQGDLIAFTKFS 367
           FE +R+ +   Y+   N   G     I  + +  + +P        W+     + +++  
Sbjct: 276 FELNRD-QNDCYLTAYNAHTGKKIGNIYHETDTKFVEPTHPITFLPWNTN-QFVMYSQKD 333

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSI 421
           G    + + +KDG Q + L +   +         T+    + +I++  +        + +
Sbjct: 334 GYN-HLYLFEKDGKQLKQLTKGEWVVMDILGFNKTF----KGIIYTSNECSPIQVNTWMV 388

Query: 422 DLNGRNETLINTP 434
           ++     TL++  
Sbjct: 389 NVETGKRTLLDNG 401



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 68/217 (31%), Gaps = 28/217 (12%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT----PSRDQILFEPRFSP 221
            T E+ +  + I    +  ++G   + + V   D    + +        D+      +SP
Sbjct: 209 FTPEEYETKAAIAAPIKYPMAGEASHKVTVGVYDLNERKTIYLQTGDPTDRYFTNITWSP 268

Query: 222 NQQKV---------------AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           ++  +               AY  +  + I  +Y         P     F          
Sbjct: 269 DENVIYMFELNRDQNDCYLTAYNAHTGKKIGNIYHETDTKFVEPTHPITFLPWNT----- 323

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGK 325
               + ++  QKD    +Y  +      ++LT   ++ +    ++     I++ S+    
Sbjct: 324 ---NQFVMYSQKDGYNHLYLFEKDGKQLKQLTKGEWVVMDILGFNKTFKGIIYTSNECSP 380

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            Q+     N    KR   D    Y +   S  G+ + 
Sbjct: 381 IQVNTWMVNVETGKRTLLDNGKGYHNARLSEDGNTLV 417


>gi|111223882|ref|YP_714676.1| putative acylaminoacyl-peptidase [Frankia alni ACN14a]
 gi|111151414|emb|CAJ63129.1| putative Acylaminoacyl-peptidase [Frankia alni ACN14a]
          Length = 783

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 22/141 (15%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + +P   ++ + +D      L++  ++G   +R+           +WSP GDLIA    
Sbjct: 48  PALAP-GGRLAYVADGPAGPALWIQDADGR-PRRVDT-GPGHVRAALWSPAGDLIAVHVA 104

Query: 367 SGEK--FAIGVMKKDGSQERLLVE----------DSNLQAPT-WSPSGRSLIFS----RK 409
            G      + V+  DG   R L +          D     P  W+  G +L+ +      
Sbjct: 105 PGGGELTEVRVVAADGGGPRSLADGGGPRRLAGGDGRAAVPARWTADGLALVVTESDRAD 164

Query: 410 KDGDTGSKLYSIDLNGRNETL 430
           + G T + L  + L+GR   L
Sbjct: 165 RTGRTAAVL--VGLDGRRARL 183



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 76/250 (30%), Gaps = 38/250 (15%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P  +P   ++AY            L     D  P+R+      + A  +S  G    + V
Sbjct: 48  PALAP-GGRLAYVADGPAGPA---LWIQDADGRPRRVDTGPGHVRAALWSPAGDLIAVHV 103

Query: 277 QKDEA--MDIYSVDLQSNATERLTNTLFIN----------ISASYSPDSSQIVFE----S 320
                   ++  V         L +               + A ++ D   +V      +
Sbjct: 104 APGGGELTEVRVVAADGGGPRSLADGGGPRRLAGGDGRAAVPARWTADGLALVVTESDRA 163

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMK 377
           DR G+    ++  +G   +    +  A     +     DL+A           + + + +
Sbjct: 164 DRTGRTAAVLVGLDGRRARL--AEGVALQVCDLV----DLVALDHGGDPLVGAYRLLLRE 217

Query: 378 KDGSQERLLVEDSNLQAP--------TW-SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                 R +V D  L  P        +W  P G + + + +   D    L   DL     
Sbjct: 218 GPRGVRRAIVVDVRLTPPAGGGAAHSSWELPGGTATVLTGRFTADGRRVLLVTDLGRERA 277

Query: 429 TLINTPAYAS 438
            L++ P  A 
Sbjct: 278 ALLDVPVDAP 287



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 1/89 (1%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
               P  +P G  +A+        A+ +   DG   R+     +++A  WSP+G  +   
Sbjct: 44  GVRAPALAPGGR-LAYVADGPAGPALWIQDADGRPRRVDTGPGHVRAALWSPAGDLIAVH 102

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAY 436
               G   +++  +  +G     +     
Sbjct: 103 VAPGGGELTEVRVVAADGGGPRSLADGGG 131



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 3/62 (4%)

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            R  V    ++AP  +P GR L +    DG  G  L+  D +GR   +   P +     W
Sbjct: 36  VRAWVAAEGVRAPALAPGGR-LAYVA--DGPAGPALWIQDADGRPRRVDTGPGHVRAALW 92

Query: 443 VG 444
             
Sbjct: 93  SP 94


>gi|126336660|ref|XP_001380418.1| PREDICTED: similar to WD repeat domain 51A [Monodelphis domestica]
          Length = 437

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 78/217 (35%), Gaps = 10/217 (4%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L +         Y        +    FSP+   VA  + D    +R+++ + + +    R
Sbjct: 5   LMIWHMKPHMRAYRFVGHKDAVMCVNFSPSGHLVASGSRD--KTVRIWVPNLKGESTVFR 62

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                  + +  FSS+G+  + +   D+ + +++V  Q       T  +     A +SPD
Sbjct: 63  --AHTGTVRSVHFSSDGQSLV-TASDDKTLKVWTVHRQ-KFLFSFTQHINWVRCAKFSPD 118

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              IV  SD    + + +      +      +         + P G  IA    +     
Sbjct: 119 GRLIVSASD---DKTVKLWDKTSRECVHSFCEHGGFVNYVDFHPSGTCIA-AAGTDNTVK 174

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           +  ++ +   +   +  + + A ++ PSG  LI +  
Sbjct: 175 LWDIRTNRLLQHYQLHSAVVNALSFHPSGNYLITASN 211



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 27/228 (11%), Positives = 65/228 (28%), Gaps = 23/228 (10%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           ++R + H   D +        G            V SG    ++ +   +      +  +
Sbjct: 16  AYRFVGHK--DAVMCVNFSPSG----------HLVASGSRDKTVRIWVPNLKGESTVFRA 63

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    FS + Q +  A+ D      + +      +         + +   +FS +G
Sbjct: 64  HTGTVRSVHFSSDGQSLVTASDDK----TLKVWTVHRQKFLFSFTQHINWVRCAKFSPDG 119

Query: 270 KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R ++S   D+ + ++  D  S                  + P  + I           +
Sbjct: 120 -RLIVSASDDKTVKLW--DKTSRECVHSFCEHGGFVNYVDFHPSGTCIAAA---GTDNTV 173

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            +     +   +  Q   A      + P G+ +           + +M
Sbjct: 174 KLWDIRTNRLLQHYQLHSAVVNALSFHPSGNYLITASNDSTLKILDLM 221


>gi|34496725|ref|NP_900940.1| dipeptidyl anminopeptidase [Chromobacterium violaceum ATCC 12472]
 gi|34102580|gb|AAQ58945.1| probable dipeptidyl anminopeptidase [Chromobacterium violaceum ATCC
           12472]
          Length = 634

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 59/177 (33%), Gaps = 8/177 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G+     +   E+     V       +R+T     ++S  +   + ++V+  D  
Sbjct: 51  TVSPDGRSVAF-LSPWESRRNIVVRRPGQPDKRVTAIKDRDLSGYFWKGNDRLVYVKDNA 109

Query: 324 G--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL---IAFTKFSGEKFAIGVMKK 378
           G     LY +       + ++                D    I+  K   E F +  +  
Sbjct: 110 GDENFHLYSVDLKSGKTRDLTPFPGVRAEIVDGLIDNDRQLLISLNKRKPEIFDVYRIDL 169

Query: 379 DGSQERLLVEDSNLQAPTWSPSGR-SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              Q  L  E+   +  +W    + ++  + + DG   + LY     G+   L+ T 
Sbjct: 170 QTGQLTLEAENPG-KVASWITDHKGNIRIAIETDGVNNTVLYRDQPGGKFRKLMTTN 225



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 53/144 (36%), Gaps = 14/144 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + SPD   + F S  E +  + V++  G   KR++  K+       W    D + + K +
Sbjct: 51  TVSPDGRSVAFLSPWESRRNI-VVRRPGQPDKRVTAIKDRDLSGYFW-KGNDRLVYVKDN 108

Query: 368 --GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG-----RSLIFSRKKDGDTGSKLYS 420
              E F +  +     + R L     ++A      G     R L+ S  K       +Y 
Sbjct: 109 AGDENFHLYSVDLKSGKTRDLTPFPGVRAEIV--DGLIDNDRQLLISLNKRKPEIFDVYR 166

Query: 421 IDLNGRNETL-INTPAYASDPQWV 443
           IDL     TL    P   +   W+
Sbjct: 167 IDLQTGQLTLEAENPGKVA--SWI 188



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 73/227 (32%), Gaps = 24/227 (10%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R+        SP+ + VA+ +       R  ++  R  +  KR+   +   L+  F    
Sbjct: 43  RNPEQSNFTVSPDGRSVAFLS---PWESRRNIVVRRPGQPDKRVTAIKDRDLSGYFWKGN 99

Query: 270 KRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDS----SQIVFESDRE 323
            R +       DE   +YSVDL+S  T  LT    +        D      + +  S  +
Sbjct: 100 DRLVYVKDNAGDENFHLYSVDLKSGKTRDLTPFPGVRAEIV---DGLIDNDRQLLISLNK 156

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTKFSGEKFAIGVMKKDG 380
            K +++ +        +++ + E       W         IA          +   +  G
Sbjct: 157 RKPEIFDVYRIDLQTGQLTLEAENPGKVASWITDHKGNIRIAIETDGVNNTVLYRDQPGG 216

Query: 381 SQERLLVEDSNLQAPTWSP-----SGRSLIFSRKKDGDTGSKLYSID 422
              +L+  +       ++P       +   ++    G   + +   D
Sbjct: 217 KFRKLMTTNFREN---FTPLFFTFDNQRF-YAASSLGRDKAAIVEYD 259



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 5/96 (5%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPS 400
             +     +   SP G  +AF      +  I V+++ G  ++ +   +D +L    W  +
Sbjct: 41  FFRNPEQSNFTVSPDGRSVAFLSPWESRRNI-VVRRPGQPDKRVTAIKDRDLSGYFWKGN 99

Query: 401 GRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPA 435
            R L++ +   GD    LYS+DL +G+   L   P 
Sbjct: 100 DR-LVYVKDNAGDENFHLYSVDLKSGKTRDLTPFPG 134


>gi|310641724|ref|YP_003946482.1| 6-phosphogluconolactonase [Paenibacillus polymyxa SC2]
 gi|309246674|gb|ADO56241.1| 6-phosphogluconolactonase [Paenibacillus polymyxa SC2]
          Length = 363

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 75/214 (35%), Gaps = 24/214 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           GA+            F   FSP+ + + +      D++R+Y +D    +           
Sbjct: 146 GAHPERQDRPHPHSSF---FSPDGRFL-FVQDLGLDLIRIYTIDDSKGQLVLHGETKTHA 201

Query: 260 ILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERL-------TNTLFINISA-- 307
              PR   F  NGK A +  + D ++  ++ D ++     L       ++    N +A  
Sbjct: 202 GAGPRHLTFHPNGKFAFVINEVDSSITSFAYDAEAGKLTELESVPTLPSDFTGENTTAEI 261

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSD-----QKRISQDKEASYFDPVWSPQGDLIA 362
           + S D + + + S+R G + + V   +G+       + +S + E        +P GD + 
Sbjct: 262 AISQDGAYL-YGSNR-GHDSIVVYAVDGATGKLSLVEHVSAEGEHP-RHFALTPNGDYML 318

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                        + K   +     +   +  P 
Sbjct: 319 VANRDTNNIVTFKVDKASGRLTYTGQQVTVSKPV 352



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/246 (9%), Positives = 73/246 (29%), Gaps = 33/246 (13%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-----------FSSNG 269
           P+ + +   +Y    +  + L +         +         P            FS +G
Sbjct: 107 PSDRYLIVVSYHGGMVGLISLTEDGRIGELLDVKQHEGKGAHPERQDRPHPHSSFFSPDG 166

Query: 270 KRALISVQKDEAMDIYSVDLQSNAT----ERLTNTLFINISASYSPDSSQIVFE-SDREG 324
           +   +     + + IY++D          E  T+        ++ P+  +  F  ++ + 
Sbjct: 167 RFLFVQDLGLDLIRIYTIDDSKGQLVLHGETKTHAGAGPRHLTFHPNG-KFAFVINEVDS 225

Query: 325 KEQLYVMQSNGSDQKRI--------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
               +   +       +            E +  +   S  G  +  +    +   +  +
Sbjct: 226 SITSFAYDAEAGKLTELESVPTLPSDFTGENTTAEIAISQDGAYLYGSNRGHDSIVVYAV 285

Query: 377 KKDGSQERLLVE-DSNLQAPT-WS--PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                +  L+    +  + P  ++  P+G  ++ +        + + +  ++  +  L  
Sbjct: 286 DGATGKLSLVEHVSAEGEHPRHFALTPNGDYMLVA----NRDTNNIVTFKVDKASGRLTY 341

Query: 433 TPAYAS 438
           T    +
Sbjct: 342 TGQQVT 347


>gi|19112937|ref|NP_596145.1| Ski complex subunit Rec14 [Schizosaccharomyces pombe 972h-]
 gi|2498838|sp|Q09150|REC14_SCHPO RecName: Full=Meiotic recombination protein rec14
 gi|1079671|gb|AAB71433.1| Rec14 [Schizosaccharomyces pombe]
 gi|3192034|emb|CAA19363.1| Ski complex subunit Rec14 [Schizosaccharomyces pombe]
          Length = 302

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 71/205 (34%), Gaps = 21/205 (10%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N ++ +       +    SP+ Q +A+ + D     R+ + D   D     +      
Sbjct: 97  GNNAQHPSE-----CWSSCISPDGQTIAFTSVDG----RIAVWDNPSDCKISELDTKGKF 147

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVF 318
            L   +S NG+     V   +   ++ +  ++      L+       S ++SP S+ +  
Sbjct: 148 GLCIDYSPNGR---FIVSGHQTGQLFLISTETGRLFHVLSGHTSPVRSVAFSPGSTLLAA 204

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             D    + + +      DQ    +   A  F   ++P GDL+      G    I +   
Sbjct: 205 AGD---SKMITIYDVLSGDQVGQLRGHAAWIFAVAFNPVGDLLLSADVEG---KIKIWDI 258

Query: 379 DGSQ--ERLLVEDSNLQAPTWSPSG 401
           D  +        D  + A  W  +G
Sbjct: 259 DTMECISTQSETDGAIWAVAWYKNG 283



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 57/158 (36%), Gaps = 18/158 (11%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYV 330
           + V      D+Y  + ++N    L N         S+  SPD   I F S  +G+  ++ 
Sbjct: 73  VVVSCGFGQDVYVWNPETNEFRDLGNNAQHPSECWSSCISPDGQTIAFTS-VDGRIAVWD 131

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-ED 389
             S+    +  ++ K        +SP G  I     +G+ F I    + G    +L    
Sbjct: 132 NPSDCKISELDTKGKFG--LCIDYSPNGRFIVSGHQTGQLFLIST--ETGRLFHVLSGHT 187

Query: 390 SNLQAPTWSP---------SGRSLIFSRKKDGDTGSKL 418
           S +++  +SP           + +       GD   +L
Sbjct: 188 SPVRSVAFSPGSTLLAAAGDSKMITIYDVLSGDQVGQL 225



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 69/202 (34%), Gaps = 19/202 (9%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
              +      + V+  +T   R         S   +   S +G+    +   D  + ++ 
Sbjct: 73  VVVSCGFGQDVYVWNPETNEFRDLGNNAQHPSECWSSCISPDGQTIAFT-SVDGRIAVWD 131

Query: 287 VDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                  +E  T   F   I+    YSP+     F        QL+++ +       +  
Sbjct: 132 NPSDCKISELDTKGKFGLCID----YSPNGR---FIVSGHQTGQLFLISTETGRLFHVLS 184

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQE-RLLVEDSNLQAPTWSPSG 401
              +      +SP   L+A    +G+   I +     G Q  +L    + + A  ++P G
Sbjct: 185 GHTSPVRSVAFSPGSTLLA---AAGDSKMITIYDVLSGDQVGQLRGHAAWIFAVAFNPVG 241

Query: 402 RSLIFSRKKDGDTGSKLYSIDL 423
             L+ S   +G    K++ ID 
Sbjct: 242 D-LLLSADVEGK--IKIWDIDT 260


>gi|59802565|gb|AAX07519.1| WD-repeat protein [Gemmata sp. Wa1-1]
          Length = 298

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 80/265 (30%), Gaps = 20/265 (7%)

Query: 176 RILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           R++ VS   V   +      + V D      ++        +F   FSP+ + +      
Sbjct: 21  RVVAVSPDGVLIAAAGEDKVIRVWDAGATTTKFALEGHAGKVFGLAFSPDSKTLCSC--- 77

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             D   V L D         I    + +    F+ +GK    S   D  + +++V     
Sbjct: 78  -GDDRTVRLWDAATGTPGAVITASDATVECVAFAPDGKTLA-SAGSDHIVRLWTVP-DGK 134

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L       I A    DS  +   +  +G  +L+               ++      
Sbjct: 135 PIRTL-KGHTRRIHALVFADSKTLA-SAGEDGGVRLWNWP--TGALIGQLPVEKHRVHAL 190

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             S  G ++A     G +        D S+   +      +A  +   G+ L        
Sbjct: 191 TVSADGKVLAAAATGGPR---WWTLADKSERPKVTSAGGTRAVAFDRDGKFLA---TGHE 244

Query: 413 DTGSKLYSIDLNGRNETLINTPAYA 437
           D   KL+S  L+G     +     A
Sbjct: 245 DGAVKLWSA-LDGAEVKTLTGHRGA 268



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 9/112 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S + + +A A              T  D++ +          A  F  +GK    +  
Sbjct: 191 TVSADGKVLAAAATGGPRWW------TLADKSERPKVTSAGGTRAVAFDRDGKFLA-TGH 243

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +D A+ ++S  L     + LT          ++PD   +V  +  +G  +L+
Sbjct: 244 EDGAVKLWSA-LDGAEVKTLTGHRGAVFGVGFTPDGKTLV-SAGSDGTVKLW 293



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 58/178 (32%), Gaps = 14/178 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +  DG  IR L     +I        + + +A A  D      V L +        
Sbjct: 126 RLWTV-PDGKPIRTLKGHTRRIHAL--VFADSKTLASAGEDGG----VRLWNWPTGALIG 178

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           ++   +  + A   S++GK    +                +   ++T+       A +  
Sbjct: 179 QLPVEKHRVHALTVSADGKVLAAAATGGPRWWTL---ADKSERPKVTSAGGTRAVA-FDR 234

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           D   +      +G  +L+    +G++ K ++     + F   ++P G  +      G 
Sbjct: 235 DGKFLA-TGHEDGAVKLW-SALDGAEVKTLT-GHRGAVFGVGFTPDGKTLVSAGSDGT 289


>gi|20090448|ref|NP_616523.1| surface antigen gene [Methanosarcina acetivorans C2A]
 gi|19915464|gb|AAM05003.1| surface antigen gene [Methanosarcina acetivorans C2A]
          Length = 453

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 66/196 (33%), Gaps = 15/196 (7%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            AY      D + +    T    A  +I  +   +     + +G +  ++     + D+ 
Sbjct: 76  FAYV-MGLSDAVSIIDTATDTVTATMKIEGYPGEV---AVTPDGTKIYVTDSGIGSTDVS 131

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            +D  +N  + + N    +  A+ +P  ++ V+ S R+    L +  +  S   +++  +
Sbjct: 132 VIDTVTNTVDAIVNVEGSSWGAAVNPAGTK-VYVSIRDSTNILVINTATNSVTAKVNVGR 190

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGR 402
                    +P G  I  T    +         D     ++   +  + P     SP G 
Sbjct: 191 NPDRI--AITPDGTKIYVTSHRSDI----TSTIDTVTNSVITTVNVGEYPWDVVVSPDGT 244

Query: 403 SLIFSRKKDGDTGSKL 418
              +      +  S +
Sbjct: 245 K-AYVTNSGSNNVSVI 259


>gi|189207098|ref|XP_001939883.1| WD repeat containing protein 26 [Pyrenophora tritici-repentis
            Pt-1C-BFP]
 gi|187975976|gb|EDU42602.1| WD repeat containing protein 26 [Pyrenophora tritici-repentis
            Pt-1C-BFP]
          Length = 1334

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 79/250 (31%), Gaps = 23/250 (9%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +  L   RD  +    +SP+  K+       E+  R++  D +  +  + I +F      
Sbjct: 1058 LHQLNEHRDSGVTHLAWSPDDTKIVTCCSQPENSARIW--DVKTGQCIQCISDFTYPCTT 1115

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--INISASYSPDSSQIVFES 320
              +  +G R +I   +D+ M     DL      +  N          + SPD  ++V  +
Sbjct: 1116 AAWDPSGTRVII-GSQDDTMGCGIWDLDGQLKHKFCNDSGKLRANDLAVSPDGQRLVVTT 1174

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +      + V      ++ +  Q ++        S     +  +        I +M+ D 
Sbjct: 1175 ETS----IVVFDFVSYEKIQEFQLEDVKLTSVSISQDSRHMLVSMSPD---QIKLMEIDT 1227

Query: 381  SQERLLVEDS----NLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTP 434
                   E       +    +       ++      G   S++Y    NG   E L   P
Sbjct: 1228 GDVIQRFEGHIQKQFIIRSAFGGADENFVV-----SGSEDSRIYIWRSNGLLIEALDAHP 1282

Query: 435  AYASDPQWVG 444
               +   W  
Sbjct: 1283 GCVNSVAWHP 1292


>gi|320582405|gb|EFW96622.1| transcription initiation factor TFIID subunit, putative [Pichia
           angusta DL-1]
          Length = 757

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/270 (15%), Positives = 91/270 (33%), Gaps = 26/270 (9%)

Query: 159 SDDIYQSITGEKGDFNS---RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
             +     T   G F     ++  +  S +  +I+N       DG   R L       ++
Sbjct: 419 CVEFNDDSTIVAGGFQDSFIKLWSIDGSPLKSVIRNDPYDQSVDG--CRRLI-GHSGAVY 475

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              FSP+   +  ++ D    +R++ MDT       +  N    +   +FS  G     +
Sbjct: 476 GLSFSPDNHYLLSSSED--KTVRLWSMDTYTSLVSYKGHNSP--VWDVKFSPLGHYFA-T 530

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSN 334
              D+   ++S D       R+      ++    + P+S+ + F    +   +++     
Sbjct: 531 ASHDQTARLWSCDHIY--PLRIFAGHLNDVDVVEFHPNSTYL-FTGSSDKTVRMW--DIA 585

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQ 393
             +  RI             SP G  +A    +GE   I +     G + + +       
Sbjct: 586 RGESVRIFIGHNMPVNALAVSPDGRWLA---TAGEDSVINMFDIASGRKLKSMRGHGRCS 642

Query: 394 APT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
             +  +S  G  L+       D   +++ +
Sbjct: 643 IYSLAFSKDGSVLV---SSGSDNSVRVWDV 669


>gi|229552659|ref|ZP_04441384.1| S9C subfamily peptidase [Lactobacillus rhamnosus LMS2-1]
 gi|258540037|ref|YP_003174536.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lactobacillus
           rhamnosus Lc 705]
 gi|229313960|gb|EEN79933.1| S9C subfamily peptidase [Lactobacillus rhamnosus LMS2-1]
 gi|257151713|emb|CAR90685.1| Dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lactobacillus
           rhamnosus Lc 705]
          Length = 661

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 69/201 (34%), Gaps = 19/201 (9%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATER 296
           R+YL++ R  +     G  +     P+ S + +     S   D+   ++   +     ++
Sbjct: 41  RIYLVNRRGQKTT--YGFDQKHDRHPQVSPDQQWLAFLSQAADKTTQVFLQRIDGGGAQQ 98

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            +N      +  + PDS  ++ ++    K Q+    +       +++         +   
Sbjct: 99  FSNEKEGVTNFGWQPDSKALLLQTTVGAKPQISESDAKKPQPVTVTRAPYKLNGVGLL-- 156

Query: 357 QGDLIAFTKFSGEKFAIGV-MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK----D 411
                         + + +  ++  +   ++    +      SP G+ + F+ ++     
Sbjct: 157 ---------KENVTYELRIQQRRQKTSHLIMKRQHDFDLGAISPDGQKIAFAAERLPDDP 207

Query: 412 GDTGSKLYSIDLNGRNETLIN 432
            D     Y  DL  +  T++N
Sbjct: 208 NDFSQATYLFDLTSQKITMVN 228



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 90/288 (31%), Gaps = 54/288 (18%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            + D+++ ++       +R  FV E+ +S         + +++R G    Y    +    
Sbjct: 4   AATDLFKLVSLSYPIATNRGFFVQENRISEEDNTYYQRIYLVNRRGQKTTYGFDQKH--D 61

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P+ SP+QQ +A+ +   +   +V+L       A ++  N +  +    +  + K  L+
Sbjct: 62  RHPQVSPDQQWLAFLSQAADKTTQVFLQRIDGGGA-QQFSNEKEGVTNFGWQPDSKALLL 120

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLF-------------------------------- 302
                    I   D +      +T   +                                
Sbjct: 121 QTTVGAKPQISESDAKKPQPVTVTRAPYKLNGVGLLKENVTYELRIQQRRQKTSHLIMKR 180

Query: 303 ---INISASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQKRIS-QDKEASYFDP 352
               ++ A  SPD  +I F ++R      +  +  Y+          ++    +A+    
Sbjct: 181 QHDFDLGA-ISPDGQKIAFAAERLPDDPNDFSQATYLFDLTSQKITMVNEHLPQAALSPE 239

Query: 353 VWSPQGDLIAFTKFSG-----EKFAIGVMKKDGSQERLLVEDSNLQAP 395
            +S  G  +             +  +        + + + +D +   P
Sbjct: 240 AFSADGQQLLLVGSDNHLPNVSQDHLWHYDLTNHELQDVADDVDFDIP 287



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 69/205 (33%), Gaps = 34/205 (16%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-----VYLMDTR 245
             L +  R       +   +         SP+ QK+A+A     D         YL D  
Sbjct: 162 YELRIQQRRQKTSHLIMKRQHDFDLG-AISPDGQKIAFAAERLPDDPNDFSQATYLFDLT 220

Query: 246 IDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTN 299
             +      +     L+P  FS++G++ L+    +   +     ++  DL ++  + + +
Sbjct: 221 SQKITMVNEHLPQAALSPEAFSADGQQLLLVGSDNHLPNVSQDHLWHYDLTNHELQDVAD 280

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQ---------------SNGSDQKRISQ- 343
            +  +I    + D     F+ D  GK   +V                   G   +R++  
Sbjct: 281 DVDFDIPGYVNSD-----FQQDLSGKVADFVTADYYLARGFDHGKMSLYAGGPDERLTPL 335

Query: 344 -DKEASYFDPVWSPQGDLIAFTKFS 367
            D      D   +P    + FT+ +
Sbjct: 336 IDGRRHVTDFALTPDHRGVIFTEST 360


>gi|199597970|ref|ZP_03211394.1| Dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lactobacillus
           rhamnosus HN001]
 gi|199591060|gb|EDY99142.1| Dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lactobacillus
           rhamnosus HN001]
          Length = 661

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/201 (12%), Positives = 69/201 (34%), Gaps = 19/201 (9%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATER 296
           R+YL++ R  +     G  +     P+ S + +     S   D+   ++   +     ++
Sbjct: 41  RIYLVNRRGQKTT--YGFDQKHDRHPQVSPDQQWLAFLSQAADKTTQVFLQRIDGGGAQQ 98

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            +N      +  + PDS  ++ ++    K Q+    +       +++         +   
Sbjct: 99  FSNEKEGVTNFGWQPDSKALLLQTTVGAKPQISESDAKKPQPVTVTRAPYKLNGVGLL-- 156

Query: 357 QGDLIAFTKFSGEKFAIGV-MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK----D 411
                         + + +  ++  +   ++    +      SP G+ + F+ ++     
Sbjct: 157 ---------KENVTYELRIQQRRQKTSHLIMKRQHDFDLGAISPDGQKIAFAAERLPDDP 207

Query: 412 GDTGSKLYSIDLNGRNETLIN 432
            D     Y  DL  +  T++N
Sbjct: 208 NDFSQATYLFDLTSQKITMVN 228



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/288 (12%), Positives = 90/288 (31%), Gaps = 54/288 (18%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            + D+++ ++       +R  FV E+ +S         + +++R G    Y    +    
Sbjct: 4   AATDLFKLVSLSYPIATNRGFFVQENRISEEDNTYYQRIYLVNRRGQKTTYGFDQKH--D 61

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P+ SP+QQ +A+ +   +   +V+L       A ++  N +  +    +  + K  L+
Sbjct: 62  RHPQVSPDQQWLAFLSQAADKTTQVFLQRIDGGGA-QQFSNEKEGVTNFGWQPDSKALLL 120

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLF-------------------------------- 302
                    I   D +      +T   +                                
Sbjct: 121 QTTVGAKPQISESDAKKPQPVTVTRAPYKLNGVGLLKENVTYELRIQQRRQKTSHLIMKR 180

Query: 303 ---INISASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQKRIS-QDKEASYFDP 352
               ++ A  SPD  +I F ++R      +  +  Y+          ++    +A+    
Sbjct: 181 QHDFDLGA-ISPDGQKIAFAAERLPDDPNDFSQATYLFDLTSQKITMVNEHLPQAALSPE 239

Query: 353 VWSPQGDLIAFTKFSG-----EKFAIGVMKKDGSQERLLVEDSNLQAP 395
            +S  G  +             +  +        + + + +D +   P
Sbjct: 240 AFSADGQQLLLVGSDNHLPNVSQDHLWHYDLTSHELQDVADDVDFDIP 287



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 69/205 (33%), Gaps = 34/205 (16%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-----VYLMDTR 245
             L +  R       +   +         SP+ QK+A+A     D         YL D  
Sbjct: 162 YELRIQQRRQKTSHLIMKRQHDFDLG-AISPDGQKIAFAAERLPDDPNDFSQATYLFDLT 220

Query: 246 IDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTN 299
             +      +     L+P  FS++G++ L+    +   +     ++  DL S+  + + +
Sbjct: 221 SQKITMVNEHLPQAALSPEAFSADGQQLLLVGSDNHLPNVSQDHLWHYDLTSHELQDVAD 280

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQ---------------SNGSDQKRISQ- 343
            +  +I    + D     F+ D  GK   +V                   G   +R++  
Sbjct: 281 DVDFDIPGYVNSD-----FQQDLSGKVADFVTADYYLARGFDHGKMSLYAGGPDERLTPL 335

Query: 344 -DKEASYFDPVWSPQGDLIAFTKFS 367
            D      D   +P    + FT+ +
Sbjct: 336 IDGRRHVTDFALTPDHRGVVFTEST 360


>gi|83774109|dbj|BAE64234.1| unnamed protein product [Aspergillus oryzae]
          Length = 1338

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 76/208 (36%), Gaps = 17/208 (8%)

Query: 218  RFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             FSPN   VA +++DD      V L D       K      S ++   FS + K  +++ 
Sbjct: 865  TFSPNGAHVACSSWDDTIQDDTVQLWDIDTGALYKSFPQPTSPVVNLTFSPDNKLLVLAT 924

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +D    I   DL S    R        ++A + S DS  I   S+ +   +++ + +  
Sbjct: 925  SED---TIDICDLASERVIRTLEGHSDRVNALAISSDSKLIASGSN-DNSVRIWKIDTG- 979

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA- 394
                 + Q  E S      SP   L+           + +            E  + ++ 
Sbjct: 980  ----ALLQTLEHSGPIRSLSPNRKLLGSVSSD---HKVLLWDATTGSLLHTFEGYSRKSG 1032

Query: 395  -PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              ++SP  + + F R +   T  +L+ +
Sbjct: 1033 TFSFSPDSKLVAF-RPQSDSTCVQLWDV 1059



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 73/212 (34%), Gaps = 13/212 (6%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + D    ++ +      +      FSP+ + VA+      D   V L D    +  + + 
Sbjct: 1012 LWDATTGSLLHTFEGYSRKSGTFSFSPDSKLVAF--RPQSDSTCVQLWDVETAQLYRTLE 1069

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            +    I    FS N ++   S+++   + I+  ++Q+        +    +  ++S   +
Sbjct: 1070 DHLDSIDRVMFSPNCQQLA-SIEEGGTITIW--NIQTGERMFSLESRGSWVCVAFSRSGA 1126

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            ++   S     + + V  +N    +   ++ +       + P   LI+     G    + 
Sbjct: 1127 KLATGS----YDTVRVWDANTGVLQLELKEHKTIVTAVAFLPDEKLISSGSNDG---KLC 1179

Query: 375  VMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLI 405
                   +  + L     +    +S  GR + 
Sbjct: 1180 FWDLSKGELSQTLHSSGAINQIVFSADGRLMA 1211



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 61/196 (31%), Gaps = 13/196 (6%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           + L     +   + +      + A  FS + +    S    + + ++  D  +       
Sbjct: 799 IKLPSVEENWNAELLSLDIKDVNAVAFSPDSRLIA-SASMSKQVKLW--DSVTGLLLHTL 855

Query: 299 NTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + +F     ++SP+ + +   S  D    + + +   +     +      +   +  +SP
Sbjct: 856 DQVFYTGGLTFSPNGAHVACSSWDDTIQDDTVQLWDIDTGALYKSFPQPTSPVVNLTFSP 915

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDT 414
              L+           I +      +    +E  +    A   S   + +        D 
Sbjct: 916 DNKLLVLATSEDT---IDICDLASERVIRTLEGHSDRVNALAISSDSKLIA---SGSNDN 969

Query: 415 GSKLYSIDLNGRNETL 430
             +++ ID     +TL
Sbjct: 970 SVRIWKIDTGALLQTL 985


>gi|289664765|ref|ZP_06486346.1| putative dipeptidyl peptidase IV [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 745

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 49/341 (14%), Positives = 104/341 (30%), Gaps = 67/341 (19%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--- 217
              + +T  +G      L      VS + + ++ V++    N   LT    + +      
Sbjct: 142 AAVRRLTHGEGFATDAKLSPKGGFVSFVRERNVWVIELASGNALQLTHDGSETIGNGVAE 201

Query: 218 -------------RFSPNQQKVAYATYDDEDIL-----RVYLMDTRIDRAPKRIGNFRSM 259
                         ++P+   +A+A  D+  +       VY   T +           ++
Sbjct: 202 FVADEEMDRHTGYWWAPDDSAIAFARIDESQVPVQKRPEVYADHTEVISQRYPQAGQPNV 261

Query: 260 IL-----------APRF-----SSN----------GKRALISVQKDEAMDIYSVD--LQS 291
            +            PR+       +           +R     Q  +   +  ++  L S
Sbjct: 262 AVRLGVIAPRAKATPRWIDLGKHPDIYLARVDWRDAQRLTFQRQSRDQKTLELIETTLAS 321

Query: 292 NATERLTNTLFINISASYSP---------DSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            A   L        S ++ P         D  + ++ S+R G E LY+   +G     ++
Sbjct: 322 GAQRTLIT----ETSPTWVPLSNDLRFLKDG-RFLWNSERSGYEHLYLASEDGRTLTPLT 376

Query: 343 QDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                         Q  ++ F  +K +  +  I  +   G         +   A +++ +
Sbjct: 377 SGNWVVDGVLAVDEQAGMVYFAASKDAPTQTHIYAVPLAGGAIEKRSSTNGTHAASFA-N 435

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             S+      +  T  ++     NG   T +      SDPQ
Sbjct: 436 NASVYVDTWSNTTTPPQIELFRANGEKITTLLKN-DLSDPQ 475



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 66/205 (32%), Gaps = 55/205 (26%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI------------------------- 246
             L +P+ +P+  +V +    D D  ++ L    I                         
Sbjct: 37  PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWGYDIASGQTRLLVDSKIVLPGTEVLSDVE 96

Query: 247 --DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTL 301
              R  +RI     ++   +++ +    L  +      ++Y  DL+        RLT+  
Sbjct: 97  KARRERQRIAALTGIVDY-QWAPDAHALLFPL----GGELYLYDLRKTGAAAVRRLTHGE 151

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-------- 353
                A  SP    + F  +R     ++V++    +  +++ D   +  + V        
Sbjct: 152 GFATDAKLSPKGGFVSFVRER----NVWVIELASGNALQLTHDGSETIGNGVAEFVADEE 207

Query: 354 --------WSPQGDLIAFTKFSGEK 370
                   W+P    IAF +    +
Sbjct: 208 MDRHTGYWWAPDDSAIAFARIDESQ 232


>gi|303239689|ref|ZP_07326214.1| serine/threonine protein kinase [Acetivibrio cellulolyticus CD2]
 gi|302592860|gb|EFL62583.1| serine/threonine protein kinase [Acetivibrio cellulolyticus CD2]
          Length = 643

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 78/185 (42%), Gaps = 27/185 (14%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVFESDREGKE 326
           G    +S   +   +IY ++   N   +L +  + FINI  ++       ++ S+   +E
Sbjct: 369 GAWIYLS-SPNHHNNIYKINTDENQVIKLNSDESWFINIVENW-------IYYSNSASRE 420

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +Y +  +G+ +++IS D              D I ++  + + + +  +  DG+ +  L
Sbjct: 421 NIYRLSIDGTKKEKISNDSCWYLNVS-----KDWIYYSNETDD-YKLYKISTDGNSKTKL 474

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA----SDPQW 442
             D +      S     + +S K DG    K+Y ID +G  +  ++    +    +D  W
Sbjct: 475 NNDKSFN---ISLYEGWIYYSNKSDGG---KIYKIDTDGNEKIRVSYDEASYFCIADG-W 527

Query: 443 VGFMD 447
           + F +
Sbjct: 528 IYFSN 532



 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 46/250 (18%), Positives = 94/250 (37%), Gaps = 34/250 (13%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S    N++  ++ D  N      S +           +  + Y+     + +    +D 
Sbjct: 375 SSPNHHNNIYKINTD-ENQVIKLNSDESWFINIV----ENWIYYSNSASRENIYRLSID- 428

Query: 245 RIDRAPKRIGNF--RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                 ++I N     + ++  +       +    + +   +Y +    N+  +L N   
Sbjct: 429 --GTKKEKISNDSCWYLNVSKDW-------IYYSNETDDYKLYKISTDGNSKTKLNNDKS 479

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            NIS         I + +  +G  ++Y + ++G+++ R+S D EASYF       G  I 
Sbjct: 480 FNISLY----EGWIYYSNKSDGG-KIYKIDTDGNEKIRVSYD-EASYFCIA---DG-WIY 529

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           F+  +     +     DG+    L  D +     +   G  + +  K D    SKLY I 
Sbjct: 530 FSNKNDG-MKLYKTNLDGTIVEKLNNDISTNINIY--DG-WVYYCNKSD---ISKLYRIR 582

Query: 423 LNGRNETLIN 432
           ++G  +T +N
Sbjct: 583 IDGSEKTKLN 592


>gi|300114457|ref|YP_003761032.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Nitrosococcus watsonii C-113]
 gi|299540394|gb|ADJ28711.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Nitrosococcus watsonii C-113]
          Length = 643

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 78/257 (30%), Gaps = 33/257 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIG--KKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           G V +          R+ +      ++     FFS     R     I D I + +T E  
Sbjct: 60  GEVKEINPAPYNARTRVHEYGGGAYLVAGDSVFFSHFEDQRLYRRQIDDSI-EPLTPEGD 118

Query: 172 D---------FNSRILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
                     F +R++ V E       +  N+L  +  DG     +  S       PR S
Sbjct: 119 YRYADAIFDRFRNRLVCVREDHTDKTREPVNTLVSIPLDGNGRISVLASGADFYASPRLS 178

Query: 221 PNQQKVAYATYDDEDILR--------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           P+  ++A+ T++  ++                 +  +    G     I  P +S  G   
Sbjct: 179 PDGSQLAWLTWNHPNMPWDGTDLWLAPVEAAGSLGESKHIAGAADESIFQPEWSPTGT-L 237

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--------DREG 324
                +    ++Y    +   TE +T          +    S   FES         R G
Sbjct: 238 YFISDRTGWWNLYR--WREQKTESVTRMEAELGVPQWVFGLSTYAFESAERIICAYSRNG 295

Query: 325 KEQLYVMQSNGSDQKRI 341
              L  M +     + +
Sbjct: 296 VSHLASMDAASGVLEEL 312



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 66/198 (33%), Gaps = 35/198 (17%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESD------ 321
           G     S  +D+ +    +D      E LT    +    A +    +++V   +      
Sbjct: 88  GDSVFFSHFEDQRLYRRQIDDS---IEPLTPEGDYRYADAIFDRFRNRLVCVREDHTDKT 144

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           RE    L  +  +G+ +  +       Y  P  SP G  +A+  ++        M  DG+
Sbjct: 145 REPVNTLVSIPLDGNGRISVLASGADFYASPRLSPDGSQLAWLTWNHPN-----MPWDGT 199

Query: 382 QERLL----------------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              L                   D ++  P WSP+G  L F   + G      +      
Sbjct: 200 DLWLAPVEAAGSLGESKHIAGAADESIFQPEWSPTGT-LYFISDRTGWWNLYRWR---EQ 255

Query: 426 RNETLINTPAYASDPQWV 443
           + E++    A    PQWV
Sbjct: 256 KTESVTRMEAELGVPQWV 273


>gi|251789555|ref|YP_003004276.1| oligogalacturonide lyase [Dickeya zeae Ech1591]
 gi|247538176|gb|ACT06797.1| Oligogalacturonide lyase [Dickeya zeae Ech1591]
          Length = 388

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 81/237 (34%), Gaps = 31/237 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
               +K+++  +  +D +    +   +   P  +   R+      FS++G + L     D
Sbjct: 1   MAKGKKLSFTFHTYQDSVTGTEV---VRLTPPDVICHRNYFYQKCFSNDGSKLLFGGAFD 57

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + Y +DL++    +LT     N    + SP+   + +  +      L  +  N  ++
Sbjct: 58  GPWNYYLLDLKTQQATQLTEGTGDNTFGGFLSPNDDALYYVKN---VRNLMRVDLNTLEE 114

Query: 339 KRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFA--------------------IGVM 376
             I Q  +       W    D   +   +   E +                     I + 
Sbjct: 115 TNIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKPLTDWKKFQEFYFTNPCCRLIRID 174

Query: 377 KKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLI 431
            K G    +L E   L  P + P    ++ F  +   D   ++++ I+ +G N   +
Sbjct: 175 LKTGEATTILQEKQWLGHPIYRPGDDNTVAFCHEGPHDLVDARMWFINEDGTNMRKV 231



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 60/179 (33%), Gaps = 24/179 (13%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 ++   +  ++ DG N+R +      +      + PN   +AY +Y      R  
Sbjct: 207 HEGPHDLVDARMWFINEDGTNMRKVKEHALGESCTHEFWVPNGSALAYVSYLKGSTNRFI 266

Query: 241 LMDTRIDRAPKRIGNFR------SMILAPRFSSNGKRALISVQKDEAMDI------YSVD 288
                +    +++          S         +G  A + V+ D    I      Y  +
Sbjct: 267 CSVDPVTLENRQLTEMPPCSHLMSNYDGSLMVGDGCNAPVDVKDDGGYKIENDPFLYVFN 326

Query: 289 LQSNATERLTNTL-FINI----------SASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +++    ++        +            S++PD   I+F SD +GK  LY+ +   S
Sbjct: 327 MKTGKHFQVAQHNTSWEVLEGDRQVTHPHPSFTPDDKHILFTSDVDGKPALYLAKVPDS 385



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 84/253 (33%), Gaps = 35/253 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  FS +  K+ +     +     YL+D +  +A +              S N   
Sbjct: 36  NYFYQKCFSNDGSKLLFGG-AFDGPWNYYLLDLKTQQATQLTEGTGDNTFGGFLSPNDDA 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASY--SPDSSQIV----------- 317
                      ++  VDL +     +       +   ++  + D +++V           
Sbjct: 95  LYYVKNV---RNLMRVDLNTLEETNIYQVPDDWVGYGTWVANSDCTKMVGIEIKKEDWKP 151

Query: 318 ------FESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
                 F+         +L  +     +   I Q+K+     P++ P   + +AF     
Sbjct: 152 LTDWKKFQEFYFTNPCCRLIRIDLKTGEATTILQEKQW-LGHPIYRPGDDNTVAFCHEGP 210

Query: 369 EKF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DG+  R + E +  ++ T   W P+G +L +     G T   + S+D
Sbjct: 211 HDLVDARMWFINEDGTNMRKVKEHALGESCTHEFWVPNGSALAYVSYLKGSTNRFICSVD 270

Query: 423 -LNGRNETLINTP 434
            +   N  L   P
Sbjct: 271 PVTLENRQLTEMP 283



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/231 (8%), Positives = 63/231 (27%), Gaps = 43/231 (18%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MD 283
           +  +   +     +           I   +  +  P +   +        +         
Sbjct: 158 FQEFYFTNPCCRLIRIDLKTGEATTILQEKQWLGHPIYRPGDDNTVAFCHEGPHDLVDAR 217

Query: 284 IYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQK 339
           ++ ++       ++             + P+ S + + S  +G     +  +     + +
Sbjct: 218 MWFINEDGTNMRKVKEHALGESCTHEFWVPNGSALAYVSYLKGSTNRFICSVDPVTLENR 277

Query: 340 RISQDKEASYFDPVWSPQGDLIA--------------------------FTKFSGEKFAI 373
           ++++    S+    +   G L+                           F   +G+ F +
Sbjct: 278 QLTEMPPCSHLMSNY--DGSLMVGDGCNAPVDVKDDGGYKIENDPFLYVFNMKTGKHFQV 335

Query: 374 GVMKKD---GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                       +R +        P+++P  + ++F+   DG     L  +
Sbjct: 336 AQHNTSWEVLEGDRQVTHP----HPSFTPDDKHILFTSDVDGKPALYLAKV 382


>gi|218691977|ref|YP_002400189.1| hypothetical protein ECED1_4380 [Escherichia coli ED1a]
 gi|218429541|emb|CAR10364.1| conserved hypothetical protein [Escherichia coli ED1a]
          Length = 404

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 53/160 (33%), Gaps = 24/160 (15%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQL 328
                      +     RLT T        +NI   +   +P  +QI F   D  G  QL
Sbjct: 254 SGTETTLPAPPRGVMQRRLTFTHHRIYPGLVNIPRHWVRCNPQGTQIAFLMRDDNGIVQL 313

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++   G    +++ +K        W P G+ + F   +     I        +   L E
Sbjct: 314 WLISPQGGKPHQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQSGEVEYLTE 369

Query: 389 DSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +        A  +SP G+ L +          +L+  + +
Sbjct: 370 NHGNPPSADAVVFSPDGQWLAWMED------GQLWITETD 403



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R +P   ++A+   DD  I++++L+  +  +  +   N   +  A  +  +G+     + 
Sbjct: 292 RCNPQGTQIAFLMRDDNGIVQLWLISPQGGKPHQLTHNKTDIQSAFNWHPSGEWLGFVLD 351

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
                 I     QS   E LT       SA    +SPD   + +  D     QL++ +++
Sbjct: 352 N----RIACAHAQSGEVEYLTENHGNPPSADAVVFSPDGQWLAWMED----GQLWITETD 403



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 5/104 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G     LT ++  I     + P+ + + +    D  I   +    
Sbjct: 305 RDDNGIVQLWLISPQGGKPHQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 362

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            ++   +  GN  S   A  FS +G+       +D  + I   D
Sbjct: 363 EVEYLTENHGNPPSAD-AVVFSPDGQWLAW--MEDGQLWITETD 403


>gi|56090230|ref|NP_001007617.1| WD repeat and SOCS box-containing protein 2 [Rattus norvegicus]
 gi|51859289|gb|AAH81901.1| WD repeat and SOCS box-containing 2 [Rattus norvegicus]
          Length = 404

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 82/217 (37%), Gaps = 25/217 (11%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ NG   L+S  +D+
Sbjct: 119 PDVSCLILATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDK 176

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 177 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 233

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---- 396
             +  ++S     +SP   L+    +      I      G + R L     L+AP     
Sbjct: 234 KLEGHQSSVVSCDFSPDSALLVTASYDTS--VIMWDPYTGERLRSLHHT-QLEAPVDDSD 290

Query: 397 ----------WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                     +SP G   ++      D   ++++++L
Sbjct: 291 VHMSSLRSVCFSPEG---LYLATVADDRLLRIWALEL 324



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 80/278 (28%), Gaps = 42/278 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT--------------------YDDEDILRVY 240
                         +   FSP+    A++                     ++ +      
Sbjct: 16  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCVVKLVPWPLEEQFIPKGFEAKSRSSKN 75

Query: 241 LMDTRIDRAPKRI---GNFRSMILAPRFSSNGKR---------------ALISVQKDEAM 282
               R     K +        +  +P  S   ++                L +   D  +
Sbjct: 76  DSKGRGSLKEKTLDCGQIVWGLAFSPWPSPPSRKLWLRHHPQVPDVSCLILATGLNDGQI 135

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P+ S I+  + R+   +++ +  +G   + +S
Sbjct: 136 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKHGKQIQVLS 194

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 195 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 252

Query: 403 SLIFSRKKDGDTGSKLYS-IDLNGRNETLINTPAYASD 439
            L+ +           Y+   L   + T +  P   SD
Sbjct: 253 LLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSD 290


>gi|289596072|ref|YP_003482768.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Aciduliprofundum boonei T469]
 gi|289533859|gb|ADD08206.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Aciduliprofundum boonei T469]
          Length = 617

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 93/263 (35%), Gaps = 39/263 (14%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           ++I +V   +          +   DG +  + +  +D     PRF+    K+ Y    ++
Sbjct: 25  TKIAYVVARMDKKKNDYLSKIYLYDGKSKAFTSGPKD---TMPRFA--GDKIVYVRKGEK 79

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                 +  + +    ++I      ++      +G                 V+ +++  
Sbjct: 80  KSEIRVI--SLVGGESRKIAEVEKGVI--NMKIDGDYVYFLS--------PVVNKENDDV 127

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +R+T+  F         +    ++ +      Q++ +   G   +++S   E      V 
Sbjct: 128 KRITSIPFYF-------NGKGFIYNA----SMQIFRVPLKGGKVEKLSNVDEKISSFDV- 175

Query: 355 SPQGDLIAFTKFSGEKF----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL-IFSRK 409
             +   I ++    E+      + ++K +G  ER+    +++ +   SP G+ +  F   
Sbjct: 176 --KNGRIIYSASEDEREPFMENLYILK-EGKGERISGRKASISSFRISPDGKKIAAFLSF 232

Query: 410 KDGDTG--SKLYSIDLNGRNETL 430
            D       +LY + + G +  L
Sbjct: 233 HDKGFAEHKRLYMLSMEGGDYEL 255



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 50/138 (36%), Gaps = 15/138 (10%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           +D  + IT     FN +    + S         +  +   G  +  L+   ++I     F
Sbjct: 124 NDDVKRITSIPFYFNGKGFIYNAS-------MQIFRVPLKGGKVEKLSNVDEKIS---SF 173

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                ++ Y+  +DE    +  +    +   +RI   ++ I + R S +GK+    +   
Sbjct: 174 DVKNGRIIYSASEDEREPFMENLYILKEGKGERISGRKASISSFRISPDGKKIAAFLSFH 233

Query: 280 E-----AMDIYSVDLQSN 292
           +        +Y + ++  
Sbjct: 234 DKGFAEHKRLYMLSMEGG 251


>gi|228925418|ref|ZP_04088513.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229119827|ref|ZP_04249087.1| Acylamino-acid-releasing enzyme [Bacillus cereus 95/8201]
 gi|228663574|gb|EEL19154.1| Acylamino-acid-releasing enzyme [Bacillus cereus 95/8201]
 gi|228834251|gb|EEM79793.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 654

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 9/100 (9%)

Query: 354 WSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  G  +AF K +        +  + + +KD G    L   D +   P WSP  +S+ +
Sbjct: 25  ISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIAY 84

Query: 407 -SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            S   DGD  ++++   L+  +E  + +     S+ +W  
Sbjct: 85  LSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGISNFKWDP 124



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/243 (11%), Positives = 74/243 (30%), Gaps = 28/243 (11%)

Query: 206 LTPSRDQILFEPR-----FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNF 256
           +  S ++I+  P       S + + VA+           Y     I    K     +   
Sbjct: 7   IYLSIEEIISLPTVLSTNISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTG 66

Query: 257 RSMILAPRFSSNGKRALISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDS 313
               + P +S + K         +      I+   L   +  ++T+      +  + P  
Sbjct: 67  DIDSIHPLWSPDSKSIAYLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGISNFKWDPTG 126

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
               + +  +  E++   +    D + + ++ + +    +     ++    +    K  I
Sbjct: 127 KGFYYITQSKECEEIKKRKELYGDFQHVGKEHQNNCLCYI-----EMEKVIQNDKGKREI 181

Query: 374 GVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNET 429
                  +    L +  +        S +G+ ++       +      LY +D+  R   
Sbjct: 182 -------NGVYQLTDGKDFYIHGFDISDNGKKVVCMATPSLNDHMNGDLYILDVEARELQ 234

Query: 430 LIN 432
            +N
Sbjct: 235 QMN 237



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 99/307 (32%), Gaps = 60/307 (19%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDD 233
           + FV  +        +N + + ++D     Y   + D     P +SP+ + +AY ++  D
Sbjct: 32  VAFVKRTANWEDNTYRNHVWIYEKD-KGKSYPLTTGDIDSIHPLWSPDSKSIAYLSSGGD 90

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI--------- 284
            D+     + +  D +  +I + +  I   ++   GK      Q  E  +I         
Sbjct: 91  GDMKNQIFVKSLDDYSEVKITDEKEGISNFKWDPTGKGFYYITQSKECEEIKKRKELYGD 150

Query: 285 --------------------YSVDLQSN----ATERLTNTLFINISAS-YSPDSSQIVFE 319
                                  + +         +LT+     I     S +  ++V  
Sbjct: 151 FQHVGKEHQNNCLCYIEMEKVIQNDKGKREINGVYQLTDGKDFYIHGFDISDNGKKVVCM 210

Query: 320 SDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           +     +     LY++     + ++++ DK        +SP+G+ I ++           
Sbjct: 211 ATPSLNDHMNGDLYILDVEARELQQMNVDKLLG-GSACFSPEGNKICYSASIREKEYYRN 269

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I  M   G   + L    +   P  W+  G  + +       T   +  +  
Sbjct: 270 HIQESTLEIYDMNT-GEVIQPLTNFDSTVMPLQWTAKGILIRW----QDKTNYFIGLLAE 324

Query: 424 NGRNETL 430
           +G  ETL
Sbjct: 325 DGTVETL 331


>gi|196036040|ref|ZP_03103441.1| putative prolyl oligopeptidase family protein [Bacillus cereus W]
 gi|195991409|gb|EDX55376.1| putative prolyl oligopeptidase family protein [Bacillus cereus W]
          Length = 654

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 9/100 (9%)

Query: 354 WSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  G  +AF K +        +  + + +KD G    L   D +   P WSP  +S+ +
Sbjct: 25  ISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIAY 84

Query: 407 -SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            S   DGD  ++++   L+  +E  + +     S+ +W  
Sbjct: 85  LSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGISNFKWDP 124



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/226 (11%), Positives = 67/226 (29%), Gaps = 23/226 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     +       + P +S + K   
Sbjct: 24  NISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIA 83

Query: 274 ISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                 +      I+   L   +  ++T+      +  + P      + +  +  E++  
Sbjct: 84  YLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGISNFKWDPTGKGFYYITQSKECEEIKK 143

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +    D + + ++ + +    +     ++    +    K  I       +    L +  
Sbjct: 144 RKELYGDFQHVGKEHQNNCLCYI-----EMEKVIQNDKGKREI-------NGVYQLTDGK 191

Query: 391 NL--QAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNETLIN 432
           +        S +G+ ++       +      LY +D+  R    +N
Sbjct: 192 DFYIHGFDISDNGKKVVCMATPSLNDHMNGDLYILDVEARELQQMN 237



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 99/307 (32%), Gaps = 60/307 (19%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDD 233
           + FV  +        +N + + ++D     Y   + D     P +SP+ + +AY ++  D
Sbjct: 32  VAFVKRTANWEDNTYRNHVWIYEKD-KGKSYPLTTGDIDSIHPLWSPDSKSIAYLSSGGD 90

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI--------- 284
            D+     + +  D +  +I + +  I   ++   GK      Q  E  +I         
Sbjct: 91  GDMKNQIFVKSLDDYSEVKITDEKEGISNFKWDPTGKGFYYITQSKECEEIKKRKELYGD 150

Query: 285 --------------------YSVDLQSN----ATERLTNTLFINISAS-YSPDSSQIVFE 319
                                  + +         +LT+     I     S +  ++V  
Sbjct: 151 FQHVGKEHQNNCLCYIEMEKVIQNDKGKREINGVYQLTDGKDFYIHGFDISDNGKKVVCM 210

Query: 320 SDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           +     +     LY++     + ++++ DK        +SP+G+ I ++           
Sbjct: 211 ATPSLNDHMNGDLYILDVEARELQQMNVDKLLG-GSACFSPEGNKICYSASIREKEYYRN 269

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I  M   G   + L    +   P  W+  G  + +       T   +  +  
Sbjct: 270 HIQESTLEIYDMNT-GEVIQPLTNFDSTVMPLQWTAKGILIRW----QDKTNYFIGLLAE 324

Query: 424 NGRNETL 430
           +G  ETL
Sbjct: 325 DGTVETL 331


>gi|332668710|ref|YP_004451717.1| WD40-like beta Propeller containing protein [Cellulomonas fimi ATCC
           484]
 gi|332337747|gb|AEE44330.1| WD40-like beta Propeller containing protein [Cellulomonas fimi ATCC
           484]
          Length = 1131

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 86/294 (29%), Gaps = 69/294 (23%)

Query: 213 ILFEPRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           +  +P +SP+  ++A+  +   D E  L   L    +           +       +   
Sbjct: 498 VDVDPAWSPDGTRIAFVRHRRVDPEGPLVPTLQVLTLVPPGPTPTPTPTPSATVTPTPTP 557

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--------- 320
                         +  V L  + T  +T         S+SPD +++V            
Sbjct: 558 TWWAALAAPPTTATLTQVPLPGDGTRTVTGLR----DPSWSPDGTRLVVSRSFEEEIIIG 613

Query: 321 --------DREGKEQLYVMQSNGSDQKRISQDKEASY-------------FDPVWSPQGD 359
                   D+    +L+V    G  +  ++   + +                P W P G 
Sbjct: 614 VAAAVVPDDQGDTSELWVTDLAGDARPLLTLANDPTCPPAVCAGGFRVGGRSPAWGPDGV 673

Query: 360 LIAFT-----------KFSGEKFAIGVMK-------------------KDGSQERLLVED 389
            IA             +++  +  +GV+                     DG+      + 
Sbjct: 674 SIAAAGLAVRGPDVPERWTEMRAQVGVVTLAAPASTDVVALRPLTGFALDGTPLPTRAQL 733

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGD-TGSKLYSIDLNGRNET-LINTPAYASDPQ 441
                P WSP G +L  +  + G      ++ +  +G     L+ TP   + P 
Sbjct: 734 VEADDPAWSPDGTALAVTGLRAGRERDPDVWVLAADGSTAAPLVATPVRETQPA 787



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 86/263 (32%), Gaps = 57/263 (21%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-----YSVDLQSNATE 295
           + D+      +R+    +    P  + +G R   +       D+     +  D  +    
Sbjct: 124 VRDSGEGWEWRRLTCDDARESHPVVAPDG-RVAYATDVGGQWDLAFTEVFVDDACAQEPV 182

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQSN--GSDQKRISQDKEASYFDP 352
                   ++  ++ P S+ +VF S R+    +LY++ +   G+  +R+++  EA     
Sbjct: 183 EPVRAPGDDLWPAWVPQSTLVVFSSTRDDPLAELYLLDAEAPGTTVRRLTRSPEAETQPT 242

Query: 353 V--WSPQGDL----IAFTKF-----SGEKFAIGVMKKDGSQ---------------ERLL 386
           V   S  G+     +A+ +      SG    I ++     +                  +
Sbjct: 243 VSDVSSDGESGVAALAYVRGAADEPSGTLNVIDLVDPSQGKGDFDPELPPDPEVLPPYKI 302

Query: 387 VEDSNLQAPTWSP------------SGRSLIFSRKKDGDTGSKLYSIDLN---------G 425
                   P++ P             G  L ++   D   G    ++ +          G
Sbjct: 303 WGGWQASEPSFGPWVDPTDDPDAFDDGYLLAWTSTVDDAAGDVRGTVAVRTALDQRLSLG 362

Query: 426 RNETLINTPAYA-SDPQWVGFMD 447
               L+ TP  A S P W  ++D
Sbjct: 363 TPVPLLATPGLAESHPTWSSWVD 385



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 66/228 (28%), Gaps = 49/228 (21%)

Query: 263 PRFSSNGKRALISVQK---DEAMDIYS------VDLQSNATERLT---NTLFINISASYS 310
           P +S  G   + S ++   D + D+ +      VD  + A    T       +++  ++S
Sbjct: 446 PAWSPTGDLVVHSGERQAVDGSEDLTTGWALELVDGLTGAALPFTYPRQPTDVDVDPAWS 505

Query: 311 PDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           PD ++I F   R    EG     +                        +P     A    
Sbjct: 506 PDGTRIAFVRHRRVDPEGPLVPTLQVLTLVPPGPTPTPTPTPSATVTPTPTPTWWAALAA 565

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK---------------KD 411
                 +  +   G   R +     L+ P+WSP G  L+ SR                 D
Sbjct: 566 PPTTATLTQVPLPGDGTRTVT---GLRDPSWSPDGTRLVVSRSFEEEIIIGVAAAVVPDD 622

Query: 412 GDTGSKLYSIDLNGRNETLINTP---------------AYASDPQWVG 444
               S+L+  DL G    L+                       P W  
Sbjct: 623 QGDTSELWVTDLAGDARPLLTLANDPTCPPAVCAGGFRVGGRSPAWGP 670



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 50/159 (31%), Gaps = 16/159 (10%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL----YVMQSNG 335
             +       +     RLT           +PD  ++ + +D  G+  L      +    
Sbjct: 119 GDVWAVRDSGEGWEWRRLTCDDARESHPVVAPDG-RVAYATDVGGQWDLAFTEVFVDDAC 177

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKD--GSQERLLVEDSNL 392
           + +             P W PQ  L+ F+    +    + ++  +  G+  R L      
Sbjct: 178 AQEPVEPVRAPGDDLWPAWVPQSTLVVFSSTRDDPLAELYLLDAEAPGTTVRRLTRSPEA 237

Query: 393 Q-APT---WSPSGRS----LIFSRKKDGDTGSKLYSIDL 423
           +  PT    S  G S    L + R    +    L  IDL
Sbjct: 238 ETQPTVSDVSSDGESGVAALAYVRGAADEPSGTLNVIDL 276



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 29/75 (38%), Gaps = 11/75 (14%)

Query: 304 NISASYSPDSSQIVFESDR---EGKEQLYV------MQSNGSDQKRISQDKEAS--YFDP 352
           ++  ++SP    +V   +R   +G E L        +          +  ++ +    DP
Sbjct: 443 DVDPAWSPTGDLVVHSGERQAVDGSEDLTTGWALELVDGLTGAALPFTYPRQPTDVDVDP 502

Query: 353 VWSPQGDLIAFTKFS 367
            WSP G  IAF +  
Sbjct: 503 AWSPDGTRIAFVRHR 517


>gi|284052558|ref|ZP_06382768.1| WD repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 267

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 77/193 (39%), Gaps = 20/193 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P+   +A +   +  + ++  +          +   +++I     S +G+    +  
Sbjct: 1   AFTPDADILALSANYEVQLWQITNITKSPPELLTILTGHKALIYTIAISPDGQMVAAAGD 60

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASY----SPDSSQIVFESDREGKEQLYVMQS 333
            D+ + ++++  +      L N+ + +    +    +PD   ++  S+ +   +L+    
Sbjct: 61  -DKTIKLWTIQGE------LINSFWAHNERIWRLAFAPDGQTLISASE-DQTVKLWT--- 109

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNL 392
                   + +++   +    +PQG+LIA        F +   + DG+  R ++     L
Sbjct: 110 -TEGVLVNTLNQDGVIWGVDINPQGNLIASASRDDT-FKLW--RLDGTLVRTIIANSGGL 165

Query: 393 QAPTWSPSGRSLI 405
               +SP G+++ 
Sbjct: 166 TRVAFSPDGQNIA 178



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 75/225 (33%), Gaps = 28/225 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI---L 261
            +      +++    SP+ Q VA       D   + L         + I +F +      
Sbjct: 34  TILTGHKALIYTIAISPDGQMVA----AAGDDKTIKLWTI----QGELINSFWAHNERIW 85

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              F+ +G+   IS  +D+ + +++ +          N   +      +P  + I   S 
Sbjct: 86  RLAFAPDGQTL-ISASEDQTVKLWTTE---GVLVNTLNQDGVIWGVDINPQGNLIASAS- 140

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R+   +L+ +        R             +SP G  IA    +G    + +   +G 
Sbjct: 141 RDDTFKLWRLD---GTLVRTIIANSGGLTRVAFSPDGQNIA---TAGVNNQVKLWNLEGE 194

Query: 382 QERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             R L   ++ + +  ++  G  L+      G     L   DL G
Sbjct: 195 LLRTLPGHEAMVISLAFTADGNFLV-----SGGDDRTLIIWDLEG 234


>gi|254558814|ref|YP_003065909.1| acylaminoacyl-peptidase [Methylobacterium extorquens DM4]
 gi|254266092|emb|CAX21844.1| putative Acylaminoacyl-peptidase [Methylobacterium extorquens DM4]
          Length = 626

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 35/103 (33%), Gaps = 4/103 (3%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG---VMKKDGSQERLLVEDSNLQAP 395
            R       + +    SP G  + +         I    +   D +          + A 
Sbjct: 6   PRAHLFGNPTRYGHQISPDGRRLGWVAPHEGVLNIWSAPIDDLDAAVPVTTDRRRGIDAY 65

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYA 437
            ++  GR L++ +  DGD    LY++DL  G    L   P  A
Sbjct: 66  AFAYDGRHLLYVQDADGDENHHLYAVDLTTGERRDLTPIPGIA 108



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 64/182 (35%), Gaps = 12/182 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNT--LFINISASYSPDSSQIVFESDR 322
           S +G+R       +  ++I+S  +   +A   +T      I+  A ++ D   +++  D 
Sbjct: 22  SPDGRRLGWVAPHEGVLNIWSAPIDDLDAAVPVTTDRRRGIDAYA-FAYDGRHLLYVQDA 80

Query: 323 EG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIGVMK 377
           +G     LY +     +++ ++     +      S       L+A          +  + 
Sbjct: 81  DGDENHHLYAVDLTTGERRDLTPIPGIAAAIVGLSRIVRDRVLVAINDRDPRFHDLHSID 140

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
               +  L++E+       +    R  + F+ +   D  S+L + D       L   P  
Sbjct: 141 LATGERSLVIENPGFAG--FLIDERYAVRFAFRNLPDGSSQLIAPDGANWKPWLTFPPED 198

Query: 437 AS 438
           A 
Sbjct: 199 AR 200


>gi|205354601|ref|YP_002228402.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205274382|emb|CAR39409.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|326629737|gb|EGE36080.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 408

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
            A              RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GAESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGKIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGKIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 404



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        +ID    R  N  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGKIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|91791648|ref|YP_561299.1| peptidase S9, prolyl oligopeptidase active site region [Shewanella
           denitrificans OS217]
 gi|91713650|gb|ABE53576.1| peptidase S9, prolyl oligopeptidase active site region [Shewanella
           denitrificans OS217]
          Length = 691

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 16/117 (13%)

Query: 265 FSSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            S +GK+A+    + +        +++ +D  S  T RLT +     + ++SPD   + F
Sbjct: 53  LSQDGKQAVWVESRWDKALDRTQTELWHIDTNSRKTTRLTFSDENESNPAWSPDGRYVYF 112

Query: 319 ESDRE---------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +            G  Q+Y + + G   + I++           +  GD I F+  
Sbjct: 113 IAKIGEKDPLHPYQGIAQIYRIAATGGQPQMITKSITG-INAFELNKSGDSIYFSTN 168



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 31/104 (29%), Gaps = 14/104 (13%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLV-EDSNLQAP 395
               ++      S  G    + +          +  +  +  +  +   L   D N   P
Sbjct: 42  FFGLSTLTQSQLSQDGKQAVWVESRWDKALDRTQTELWHIDTNSRKTTRLTFSDENESNP 101

Query: 396 TWSPSGRSLIFSRKKDG-------DTGSKLYSIDLNGRNETLIN 432
            WSP GR + F  K             +++Y I   G    +I 
Sbjct: 102 AWSPDGRYVYFIAKIGEKDPLHPYQGIAQIYRIAATGGQPQMIT 145



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 78/266 (29%), Gaps = 58/266 (21%)

Query: 220 SPNQQKVAYATYDDEDIL---RVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALIS 275
           S + ++  +     +  L   +  L     + R   R+         P +S +G+     
Sbjct: 54  SQDGKQAVWVESRWDKALDRTQTELWHIDTNSRKTTRLTFSDENESNPAWSPDGRYVYFI 113

Query: 276 VQKD---------EAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDRE-- 323
            +               IY +       + +T +   IN     +     I F +++E  
Sbjct: 114 AKIGEKDPLHPYQGIAQIYRIAATGGQPQMITKSITGINAF-ELNKSGDSIYFSTNKEVT 172

Query: 324 -------------------GKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                              GK+    +Y +      Q+ +  D +  +   V +     I
Sbjct: 173 DKDHFASLRADHSKVNYAQGKKTTNPIYRLNLQHFSQELLLDDDKVVWQFSV-NDNETKI 231

Query: 362 AFTKFSG-------EKFAIGVMKKDGSQERLLVED-SNLQAPT---------WSPSGRSL 404
           A    +         +  I V     +   LL +D    +AP+         W    + L
Sbjct: 232 ARITTTDNELIFLEGRSNIEVFDIKQANNILLADDKWREKAPSAYGWLLGLDWHHDNQRL 291

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETL 430
            F    DG  G +L+  +   +   +
Sbjct: 292 AFRIDFDGFPG-QLFVANTAAKQAVI 316


>gi|170727265|ref|YP_001761291.1| transcriptional regulator CadC [Shewanella woodyi ATCC 51908]
 gi|169812612|gb|ACA87196.1| transcriptional regulator, CadC [Shewanella woodyi ATCC 51908]
          Length = 711

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 61/167 (36%), Gaps = 11/167 (6%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTN 299
           +         R+ +        R+S +G+    S        MD+   D Q+     + +
Sbjct: 152 LSLPTYEYETRLTSVPGPEGFLRYSPDGRYLAFSQISDNRSQMDLVVYDSQTETIHSIKS 211

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQG 358
           T +   +  +SPDS  +++         + +M  +   +  R+S D+     +P +S Q 
Sbjct: 212 TGYSEEAPEWSPDSQWLIYYRHDPLSCDIRIMSVSTPVETWRLSPDRHLGDCEPGYSRQK 271

Query: 359 ------DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                 D +   ++   +  +  +         +V+  +L  P +SP
Sbjct: 272 MHWVSSDTLYRRRWRDNQAILTKISLSNDDSPQIVQQRDL--PEFSP 316



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 67/168 (39%), Gaps = 18/168 (10%)

Query: 270 KRALISVQKDEAMDIYSVDL----QSNAT--ERLTNTLFINISASYSPDSSQIVFESDRE 323
           ++   S +    +++Y++DL     S      +++++   +I  + S +  Q+ F S + 
Sbjct: 408 QQLAYS-EGQVNVNLYNIDLHHQSNSGEVKSRQVSSSARTDILPTMSKEGDQMAFVSFQR 466

Query: 324 GKE------QLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVM 376
           G        ++++   +      ++   E    D + WSP G+ I        +  + ++
Sbjct: 467 GAADGLSHVEIWLKHKHKKAASLLTNLAENIKPDYLLWSPNGENIL---LGDTEDKLYLI 523

Query: 377 KKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                    +V     L A  WS  G+ + FS   +G+    +Y + L
Sbjct: 524 NTFSRHMVPIVSGYEQLDAVVWSADGKRIHFSALDEGEWQPWMYDLQL 571



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 78/207 (37%), Gaps = 36/207 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SPN + +     +D+    +YL++T        +  +  +  A  +S++GKR   S   
Sbjct: 504 WSPNGENILLGDTEDK----LYLINTFSRHMVPIVSGYEQLD-AVVWSADGKRIHFSALD 558

Query: 279 DEAMDIYSVDLQSNATE----------RLTNTLFINISASYSPDSSQIV-FESDREGKEQ 327
           +     +  DLQ   +           +L +    N++ S+   S++I  F S +    +
Sbjct: 559 EGEWQPWMYDLQLGTSTPVEETGQEKGKLQDVSMKNLNPSFINYSARIADFLSLKL-APE 617

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           L +                 S + P  + QG  I +    G    +   + D +  RL+ 
Sbjct: 618 LGLYDL----------QPSLSLYRPAITEQG--IYYVVRQGLLLKLYYYEFDTNHNRLIS 665

Query: 388 EDSNLQ-------APTWSPSGRSLIFS 407
              N +       + + S  G+ +++S
Sbjct: 666 HIGNHEQDFALTLSVSASDDGKRVVYS 692



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 41/111 (36%), Gaps = 11/111 (9%)

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL---LVEDSNLQA 394
           + R++           +SP G  +AF++ S  +  + ++  D   E +        + +A
Sbjct: 160 ETRLTSV-PGPEGFLRYSPDGRYLAFSQISDNRSQMDLVVYDSQTETIHSIKSTGYSEEA 218

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-------PAYAS 438
           P WSP  + LI+ R        ++ S+        L          P Y+ 
Sbjct: 219 PEWSPDSQWLIYYRHDPLSCDIRIMSVSTPVETWRLSPDRHLGDCEPGYSR 269



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 61/173 (35%), Gaps = 13/173 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+SP+ + +A++   D       ++          I +      AP +S + +  +    
Sbjct: 174 RYSPDGRYLAFSQISDNRSQMDLVVYDSQTETIHSIKSTGYSEEAPEWSPDSQWLIYYRH 233

Query: 278 KDEAMDIYSVDLQSNATE-RLTNTLFI-NISASYSPDSSQIVFESD-------REGKEQL 328
              + DI  + + +     RL+    + +    YS      V  SD       R+ +  L
Sbjct: 234 DPLSCDIRIMSVSTPVETWRLSPDRHLGDCEPGYSRQKMHWV-SSDTLYRRRWRDNQAIL 292

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAF--TKFSGEKFAIGVMKK 378
             +  +  D  +I Q ++   F P+      + +     +   + F + ++  
Sbjct: 293 TKISLSNDDSPQIVQQRDLPEFSPLLMDIDKESLLMLLVEKRQKWFELRLVDL 345



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD-P 440
           + RL           +SP GR L FS+  D  +   L   D        I +  Y+ + P
Sbjct: 160 ETRLTSVPGPEGFLRYSPDGRYLAFSQISDNRSQMDLVVYDSQTETIHSIKSTGYSEEAP 219

Query: 441 QWVG 444
           +W  
Sbjct: 220 EWSP 223


>gi|193698857|ref|XP_001948719.1| PREDICTED: protein will die slowly-like isoform 1 [Acyrthosiphon
           pisum]
 gi|328713144|ref|XP_003245003.1| PREDICTED: protein will die slowly-like isoform 2 [Acyrthosiphon
           pisum]
          Length = 317

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 79/207 (38%), Gaps = 13/207 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            ++++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 18  YSLKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKSIAGHKLGI 73

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + ++ +   S   + L          +++P S+ I   S
Sbjct: 74  SDVSWSSD-SRLLVSASDDKTLKVWELS-SSKCVKTLKGHSNYVFCCNFNPQSNLIASGS 131

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + + +       +             ++  G L+  + + G    I      G
Sbjct: 132 F---DESVRIWEVKSGKCLKTLPAHSDPVSAVHFNRDGSLVVSSSYDG-LCRIW-DTASG 186

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLI 405
              + L++D N  +    +SP+G+ ++
Sbjct: 187 QCLKTLIDDDNPPVSFVKFSPNGKYIL 213


>gi|119470259|ref|ZP_01613018.1| putative enzymatic protein [Alteromonadales bacterium TW-7]
 gi|119446431|gb|EAW27706.1| putative enzymatic protein [Alteromonadales bacterium TW-7]
          Length = 833

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 92/248 (37%), Gaps = 17/248 (6%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N+   T +       P F  ++  +A    ++   L          RA   I N+     
Sbjct: 324 NLNDKTQNTLAFDSLPGF--DEDVLASVKQENYARLGKTYESKNSTRAINLITNWGLGQS 381

Query: 262 APRFSSNGKRALISVQKDEAMDIY--SVDLQSNAT---ERLTNTLFINISAS---YSPDS 313
              ++ +G +  I ++  +  D +  +VD ++N      RL +  +I  + +   +  ++
Sbjct: 382 PIVWNKDGSQVAIMLEAWDNKDRWIATVDFENNKLVSQHRLHDDAWIAYAFNNFGWLNNA 441

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKF 371
           + + + S+  G  QLY    NG +   ++Q  E    +P  +     I +         +
Sbjct: 442 NTLYYLSEESGYSQLYKKPLNG-NAVALTQ-GEFEVSNPTVTSDDSAIYYKANVEHPGLY 499

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID--LNGRNET 429
            I  +    ++   + + + +   T SP    L+    K     S+LY  D   N     
Sbjct: 500 EIFRVDPQTAKSEKITDLNGMTDYTLSPDEEKLLLVHSKI-TMPSELYIADAKANATPTR 558

Query: 430 LINTPAYA 437
           L NT + A
Sbjct: 559 LTNTVSSA 566



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 16/145 (11%), Positives = 54/145 (37%), Gaps = 15/145 (10%)

Query: 203 IRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           ++      D I  +P+   ++ +   + Y+       LR     +   +  ++I   +  
Sbjct: 60  LKQAMADPDWIGNQPQNAFWAADSATIIYSQKQQGSTLRDLFSQSVTSQTAEQIALNKLH 119

Query: 260 ILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            L  R   +S++        + +    ++  ++++N   ++T++     +  +  D + +
Sbjct: 120 TLGARNAVYSNDKALQAYVFKGN----VFVKNIKTNTLRQITHSTANESNPQFLNDGT-L 174

Query: 317 VFESDREGKEQLYVMQSNGSDQKRI 341
            +   R+G    + +       + I
Sbjct: 175 AY---RQGNM-FFKVDLVTGLTQEI 195


>gi|320167755|gb|EFW44654.1| WD repeat-containing protein [Capsaspora owczarzaki ATCC 30864]
          Length = 649

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 85/252 (33%), Gaps = 43/252 (17%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYD-----------------DEDILRVYLMDTRI 246
           + +       ++  +FS +  ++A A+ D                       + ++   +
Sbjct: 257 QQVLADHLDEVWFVKFSNDGTRLASASKDCLIIIWDVSLVIGLGSYTPSSYLIPILQKPV 316

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINI 305
                 +   +  +    +S + K  + S   D  + ++  D+++   +R LT       
Sbjct: 317 IEKLVTLTGHKDAVSFVSWSPDDKTLV-SCSNDYTVRMW--DVKTGVCKRTLTKHTLSIT 373

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             S++PD S+ V  S         V    G+         +A + D  +   G  +    
Sbjct: 374 CCSWAPDGSKFVTGSL---DTTAIVWDVEGNQL----DKFDARFTDMAFLSDGKRLLGVH 426

Query: 366 FSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLI--FSRKKDGDT------- 414
             G      +    G Q R  ++ E   + +   S  G  L+  F+  ++  T       
Sbjct: 427 CHGTVVMYHI----GEQRREEVIHETGAITSICLSKDGNYLLLNFAASRESTTLARSPQD 482

Query: 415 GSKLYSIDLNGR 426
           G++++  D+  R
Sbjct: 483 GARIHLWDIEKR 494


>gi|70986590|ref|XP_748786.1| vegetative incompatibility WD repeat protein [Aspergillus fumigatus
           Af293]
 gi|66846416|gb|EAL86748.1| vegetative incompatibility WD repeat protein, putative [Aspergillus
           fumigatus Af293]
          Length = 553

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 79/248 (31%), Gaps = 19/248 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D     +++        +    FS + Q +A  ++D      + L D  
Sbjct: 154 SGSDDKTIKLWDPTTGALKHTLEGHSDSILSVAFSQDGQFLASGSHDK----TIKLWDPT 209

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                  +      + +  F  +  + L S   D+   ++  D  + A +  L       
Sbjct: 210 TGNLKHTLEGHSDWVRSVAFWKD-SQLLASGSDDKTTRLW--DPTTGALKHTLEGHSDSI 266

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++S D   +   SD    E + +     S   +  +    S +   +S  G L+A  
Sbjct: 267 RSVAFSQDGQLLASGSD---DETVKLWDPTTSFLMQTLEGHSDSVWTVAFSQDGQLLASG 323

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                   I +        +  +E  +    +  +S + R L        D   KL+   
Sbjct: 324 SRDRT---IKLWDPAIGAVKHTLEGHSDWVRSVAFSQNSRFLASGSY---DKTIKLWDPT 377

Query: 423 LNGRNETL 430
                 TL
Sbjct: 378 TGNLKHTL 385



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 82/295 (27%), Gaps = 53/295 (17%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD------------ 233
           SG    ++ + D     +++        +    FS + Q +A  + D+            
Sbjct: 70  SGSDDKTIKLWDPTTGALKHTLVGHSDSILSVAFSQDGQFLASGSDDETIKLWDPTTGNL 129

Query: 234 --------------------------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                                      D   + L D         +      IL+  FS 
Sbjct: 130 KHTLEGHSDWVRSVAFWKDSQLLASGSDDKTIKLWDPTTGALKHTLEGHSDSILSVAFSQ 189

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKE 326
           +G+    S   D+ + ++  D  +   +  L        S ++  DS  +   SD    +
Sbjct: 190 DGQFLA-SGSHDKTIKLW--DPTTGNLKHTLEGHSDWVRSVAFWKDSQLLASGSD---DK 243

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
              +        K   +    S     +S  G L+A          + +     S     
Sbjct: 244 TTRLWDPTTGALKHTLEGHSDSIRSVAFSQDGQLLASGSDDET---VKLWDPTTSFLMQT 300

Query: 387 VEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +E  +    T  +S  G+ L    +   D   KL+   +     TL     +   
Sbjct: 301 LEGHSDSVWTVAFSQDGQLLASGSR---DRTIKLWDPAIGAVKHTLEGHSDWVRS 352



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 67/242 (27%), Gaps = 31/242 (12%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +      + +   P +     KV                +       + +G     +
Sbjct: 13  FTPQKALNRGNFVRNPPGWLSKGPKV----------------EENWSPELQTLGGLSHWV 56

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
            +  FS +G+    S   D+ + ++  D  + A +  L       +S ++S D   +   
Sbjct: 57  WSVAFSQDGQLLA-SGSDDKTIKLW--DPTTGALKHTLVGHSDSILSVAFSQDGQFLASG 113

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD    E + +      + K   +          +     L+A          I +    
Sbjct: 114 SD---DETIKLWDPTTGNLKHTLEGHSDWVRSVAFWKDSQLLASGSDDKT---IKLWDPT 167

Query: 380 GSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               +  +E  +    +  +S  G+ L        D   KL+         TL     + 
Sbjct: 168 TGALKHTLEGHSDSILSVAFSQDGQFLASGSH---DKTIKLWDPTTGNLKHTLEGHSDWV 224

Query: 438 SD 439
             
Sbjct: 225 RS 226


>gi|294674479|ref|YP_003575095.1| S9 family peptidase [Prevotella ruminicola 23]
 gi|294472355|gb|ADE81744.1| peptidase, S9B (dipeptidyl-peptidase IV) subfamily [Prevotella
           ruminicola 23]
          Length = 706

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 36/293 (12%), Positives = 100/293 (34%), Gaps = 52/293 (17%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKV 226
            +    + +  + L V+D  G   +  T    +I++                +SP+  K+
Sbjct: 134 ATSRATAYVENHQLYVVDGAGKKHQLSTDGSREIVYGQSVHRNEFGIDKGTFWSPDGSKL 193

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMD 283
           A+   D                    + ++  + + PR   +  +  +  ++      + 
Sbjct: 194 AFYRMDQS-----------------MVTDYPQVDIFPRNASYEPD--KYPMAGMTSHKVT 234

Query: 284 IYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVF-ESDREGKE-QLYVMQSNGS-- 336
           +   D++S  T  L      +    + S++PD+  +   E +R+  + +L    +N    
Sbjct: 235 VGVFDVKSGKTVYLQAGDPTDRYFTNISWAPDAQTVYMLELNRKQNDCRLVSYDANTGAK 294

Query: 337 --DQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             +  R + +K      P+    W                  + +M K G Q + +    
Sbjct: 295 IAELYRETSEKYVEPQHPIEFLPW--DASKFVMQSQKDGYNHLYLMDKSGKQLKQITSGK 352

Query: 391 N--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              ++   ++   +++I +  +       L++++++    TL++        +
Sbjct: 353 WVVMEVLGFNLKDKAVIIASNELSPLQRNLWAVNISTGKRTLLDNGKGVHRGE 405


>gi|282599847|ref|ZP_06257386.1| putative cytoplasmic protein [Providencia rustigianii DSM 4541]
 gi|282567374|gb|EFB72909.1| putative cytoplasmic protein [Providencia rustigianii DSM 4541]
          Length = 442

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 18/146 (12%)

Query: 293 ATERLTNT-----LFINISAS-Y---SPDSSQIVFES-DREGKEQLYVMQSNGSDQKRIS 342
              RLT T       +      +   SPD   I     D +G  QL+++ ++  +  +++
Sbjct: 300 QQRRLTYTHTRKYPGLAKQPRHWLRSSPDGQSIACLMHDDQGVVQLWLVATSTGELTQVT 359

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL----QAPTWS 398
            +  +      W+  G+ I F   +    ++        + + L E + +     A  +S
Sbjct: 360 HEMTSIQSAFNWNKTGEYICFIHDN----SVVRCHVATGKLKRLTERTEIAPVADAVVFS 415

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLN 424
           P+ R + F R  +G     +    LN
Sbjct: 416 PNDRLIAFMRDINGFRQLHIVETGLN 441


>gi|171695704|ref|XP_001912776.1| hypothetical protein [Podospora anserina S mat+]
 gi|170948094|emb|CAP60258.1| unnamed protein product [Podospora anserina S mat+]
          Length = 511

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/332 (11%), Positives = 93/332 (28%), Gaps = 59/332 (17%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           ++AH IS        G+           S  + +G   N+  + + D             
Sbjct: 137 RMAHKIS------GHGQPILCCQFSPLSSSRLATGSGDNTARIWNVDTGTPEKTLSGHTG 190

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +    + P+ Q++A  + D      V + D    ++   +      +L   +     + 
Sbjct: 191 WVMSVNWRPDGQQLATCSMDK----TVRVWDPATGKSTAELKGHAKWVLGLAWEPYHCKL 246

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           + S  KD    I+ V+        L+          +    +  ++   ++   +++   
Sbjct: 247 V-SCSKDGTARIWVVN-TGRTEHVLSGHKSSITCVRWG--GTGQIYTGSQDRTVRIWD-S 301

Query: 333 SNGSDQKRISQDKEASYFDPVWSP-----------------------------------Q 357
             G+  + ++          + S                                     
Sbjct: 302 VKGTLVQSLTAHGHWINNIALSSDFVLRTGYLDHSKEVPETEEAKRTKAKERFEKAVKIN 361

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQ----ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           G +      + + F + +     +      RLL   + +    +SP G  +        D
Sbjct: 362 GKVAERFVSASDDFTMYLWDPTDNGNKPVARLLGHQNKVNQCAFSPDGTMIA---SAGWD 418

Query: 414 TGSKLYSIDLNGRN-ETLINTPAYASDPQWVG 444
             +KL++   +G+   TL           W  
Sbjct: 419 NHTKLWNAR-DGKFLTTLRGHVGPVFQCAWSA 449



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 13/158 (8%)

Query: 180 VSESVVSGIIKNSLCVMDR--DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           V+E  VS     ++ + D   +G             + +  FSP+   +A A +D+    
Sbjct: 364 VAERFVSASDDFTMYLWDPTDNGNKPVARLLGHQNKVNQCAFSPDGTMIASAGWDN---- 419

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
              L + R  +    +      +    +S++  R L++  +D  + +++V L+      L
Sbjct: 420 HTKLWNARDGKFLTTLRGHVGPVFQCAWSAD-SRLLVTGSRDCTLKVWNV-LKGALARDL 477

Query: 298 TNTLFINISASYSP-DSSQIVFESDREGKEQLYVMQSN 334
                   +  ++P D +++       GK++      N
Sbjct: 478 PGHEDEVYAVDWAPRDGAKVA----SGGKDKAVRTWMN 511



 Score = 37.3 bits (85), Expect = 5.1,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 43/143 (30%), Gaps = 10/143 (6%)

Query: 268 NGKRA--LISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREG 324
           NGK A   +S   D  M ++      N    RL          ++SPD + I        
Sbjct: 361 NGKVAERFVSASDDFTMYLWDPTDNGNKPVARLLGHQNKVNQCAFSPDGTMIA---SAGW 417

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                +  +         +      F   WS    L+             V+K  G+  R
Sbjct: 418 DNHTKLWNARDGKFLTTLRGHVGPVFQCAWSADSRLLVTGSRDCTLKVWNVLK--GALAR 475

Query: 385 -LLVEDSNLQAPTWSP-SGRSLI 405
            L   +  + A  W+P  G  + 
Sbjct: 476 DLPGHEDEVYAVDWAPRDGAKVA 498


>gi|118475931|ref|YP_893082.1| prolyl oligopeptidase family protein [Bacillus thuringiensis str.
           Al Hakam]
 gi|225862216|ref|YP_002747594.1| putative prolyl oligopeptidase family protein [Bacillus cereus
           03BB102]
 gi|118415156|gb|ABK83575.1| prolyl oligopeptidase family protein [Bacillus thuringiensis str.
           Al Hakam]
 gi|225790058|gb|ACO30275.1| putative prolyl oligopeptidase family protein [Bacillus cereus
           03BB102]
          Length = 654

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 71/225 (31%), Gaps = 21/225 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     +       + P +S + K   
Sbjct: 24  NISDDGKNVAFVKKTANWEDSTYRNHVWIYEKGKGQSYPLTTGDIDSIHPLWSPDSKSIA 83

Query: 274 ISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                 +      I+   L   +  ++T+      +  + P      + +  +  E++  
Sbjct: 84  YLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDPTGKGFYYITQSKECEEIKK 143

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLLVED 389
            +    D + + ++ + +    +     ++    +   E+  I GV +  G       +D
Sbjct: 144 RKELYGDFQHVGKEHQNNCLCYI-----EIEKVIQNDKEEREINGVYQLTGG------KD 192

Query: 390 SNLQAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNETLIN 432
             +     S +G+ ++       +      LY +D+  R    +N
Sbjct: 193 FYIHGFDISDNGKKVVCMATPSLNDHMNGDLYILDVEARELQQMN 237



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 9/106 (8%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPS 400
           +      S  G  +AF K +        +  + + +K  G    L   D +   P WSP 
Sbjct: 19  TLSSTNISDDGKNVAFVKKTANWEDSTYRNHVWIYEKGKGQSYPLTTGDIDSIHPLWSPD 78

Query: 401 GRSLIF-SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            +S+ + S   DGD  ++++   L+  +E  + +     S+ +W  
Sbjct: 79  SKSIAYLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDP 124



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 11/115 (9%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++ +        ++   +     P+WSP   
Sbjct: 22  STNISDDGKNVAFVKKTANWEDSTYRNHVWIYEKGKGQSYPLTT-GDIDSIHPLWSPDSK 80

Query: 360 LIAFTKFSGE---KFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G+   K  I V   D  S+ ++  E   +    W P+G+   +  + 
Sbjct: 81  SIAYLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDPTGKGFYYITQS 135



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 45/307 (14%), Positives = 102/307 (33%), Gaps = 60/307 (19%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDD 233
           + FV ++        +N + + ++ G    Y   + D     P +SP+ + +AY ++  D
Sbjct: 32  VAFVKKTANWEDSTYRNHVWIYEK-GKGQSYPLTTGDIDSIHPLWSPDSKSIAYLSSGGD 90

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
            D+     + +  D +  +I + +  +   R+   GK      Q                
Sbjct: 91  GDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDPTGKGFYYITQSKECEEIKKRKELYGD 150

Query: 278 ------KDEAMDIYSVDLQS-----------NATERLTNTLFINISAS-YSPDSSQIVFE 319
                 + +   +  ++++            N   +LT      I     S +  ++V  
Sbjct: 151 FQHVGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTGGKDFYIHGFDISDNGKKVVCM 210

Query: 320 SDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           +     +     LY++     + ++++ DK        +SP+G+ I ++           
Sbjct: 211 ATPSLNDHMNGDLYILDVEARELQQMNVDKLLG-GSACFSPEGNKICYSASIREKEYYRN 269

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I  M   G   + L    +   P  W+  G  + +       T   +  +  
Sbjct: 270 HIQESTLEIYDMNT-GEVIQPLTNFDSTVMPLQWTAKGILIRW----QDKTNYFIGLLAE 324

Query: 424 NGRNETL 430
           +G  ETL
Sbjct: 325 DGTVETL 331


>gi|27381596|ref|NP_773125.1| hypothetical protein bll6485 [Bradyrhizobium japonicum USDA 110]
 gi|27354764|dbj|BAC51750.1| bll6485 [Bradyrhizobium japonicum USDA 110]
          Length = 489

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 82/230 (35%), Gaps = 15/230 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+ ++V            + ++D +     +RI           FS +GK A I    
Sbjct: 138 FTPDGKEV---WVTVRGENYISVIDPQSFEERRRITTPSGP-GMQMFSPDGKYAYICSSF 193

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   D+ +V  +     ++        + + +PD +Q+ F     G+ Q++  +   +  
Sbjct: 194 NPETDVVAV-AEHKIIAKVKQESPFCPNIAVTPDGNQVWFTLKDTGRTQVFNARPPFNPI 252

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW- 397
           + I      ++ +   + +G   A+    G    + V + D   +   +   NL    W 
Sbjct: 253 RTIDTGPITNHVNFAHTARGTF-AYVTI-GGLNQVKVFRTDDFSQVATIPVGNLPHGVWP 310

Query: 398 SPSGRSLIF-------SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           S  G  +             D  T S + ++ +    + +   P  A +P
Sbjct: 311 SGDGTRIYVGLENADALAAIDTATNSVVANVPIGQAPQAIAYVPGAAPNP 360



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A  +     +  +    T   +    IG          F+ +GK   ++V+ 
Sbjct: 96  FSPDHKMLAVVSIGSNSVTFIDT-ATNAVKHTTYIGRSPHEAF---FTPDGKEVWVTVR- 150

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                I  +D QS    R   T        +SPD       S    +  +  +    ++ 
Sbjct: 151 -GENYISVIDPQSFEERRRITTPSGPGMQMFSPDGKYAYICSSFNPETDVVAV----AEH 205

Query: 339 KRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIG 374
           K I++ K+ S F P    +P G+ + FT     +  + 
Sbjct: 206 KIIAKVKQESPFCPNIAVTPDGNQVWFTLKDTGRTQVF 243


>gi|298249603|ref|ZP_06973407.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297547607|gb|EFH81474.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 651

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 70/226 (30%), Gaps = 36/226 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN------GKR 271
            +SP Q  +A A  D     RV++ D    R           +    +  +      G+ 
Sbjct: 437 AWSPGQFFLASAASDG----RVHVWDAMTGRLITIYQGHAGSVNMLAWFPDEASPAPGRD 492

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP----------DSSQIVFESD 321
             I    D+               R         S  +SP            S  +  S 
Sbjct: 493 YRIVSGGDDRSVQVWDAFTGTNITRHQGYPARVTSVDWSPRVYSSLSLGSSFSASILNSS 552

Query: 322 REG---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           R G    + +  M    ++++ +S    A      WSP G   A++   G+     V   
Sbjct: 553 RVGCGRDDGMVQMWDTATNREVLSYRYAAPISVVAWSPNGTRFAYS---GKNAKAEVWDT 609

Query: 379 DGSQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYS 420
                RL     +  APT    WSPSG+ +       GD   +++ 
Sbjct: 610 KT-NLRLFT--FSHAAPTQVLAWSPSGKHIA---SGGGDGTIQVWV 649



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 51/145 (35%), Gaps = 18/145 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+  ++  A+++      V++ +           N  ++I    +S +  R  +   
Sbjct: 352 SWSPDGTRIVSASHEK----TVHIWNAMTGSTINIYNNHSNVIDLVAWSPDRTRIAMV-- 405

Query: 278 KDEAMDIYSVDLQSNATERLTN----TLFINISA-SYSPDSSQIVFESDREGKEQLYVMQ 332
                 I   D  +N   RL       L   ++A ++SP     +  +  +G  +++V  
Sbjct: 406 -GADAHIQVWDFATN---RLIASYRGHLGNTVNAIAWSP-GQFFLASAASDG--RVHVWD 458

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQ 357
           +       I Q    S     W P 
Sbjct: 459 AMTGRLITIYQGHAGSVNMLAWFPD 483



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 14/113 (12%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S S+SPD ++IV  S     + +++  +       I  +         WSP    IA   
Sbjct: 350 SLSWSPDGTRIVSASHE---KTVHIWNAMTGSTINIYNNHSNVIDLVAWSPDRTRIAMV- 405

Query: 366 FSGEKFAIGVMKKDGSQERLLVE-----DSNLQAPTWSPSGRSLIFSRKKDGD 413
             G    I V     +  RL+        + + A  WSP G+  + S   DG 
Sbjct: 406 --GADAHIQVWDFATN--RLIASYRGHLGNTVNAIAWSP-GQFFLASAASDGR 453


>gi|228960625|ref|ZP_04122271.1| TolB domain protein [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|228799053|gb|EEM46024.1| TolB domain protein [Bacillus thuringiensis serovar pakistani str.
           T13001]
          Length = 399

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 90/250 (36%), Gaps = 55/250 (22%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG  I+     + + +  P++S + + +AY     + IL +Y +     +
Sbjct: 22  RHHNLWI-KVDGKEIQIT---KGEYITGPKWSYDGEWLAYVKGKKQSILELYRL-----K 72

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 +++ D++        NT F N+SA 
Sbjct: 73  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLHTFDVEKK------NTDFENVSAG 122

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD  +    S+       +     G+    + +D   +               
Sbjct: 123 VGDYAWYPDGKKFFVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 178

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPT 396
                      WSP    I+F       +S +   + +++ DGS+  ++ +   N +   
Sbjct: 179 DFLALVASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEIVDQMLLNTEWFK 238

Query: 397 WSPSGRSLIF 406
           W+PS   L +
Sbjct: 239 WAPSKNILAY 248



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       + + K DG + ++  +   +  P WS  G  L + + K   +  +LY
Sbjct: 17  KVAFIRH----HNLWI-KVDGKEIQI-TKGEYITGPKWSYDGEWLAYVKGKK-QSILELY 69

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 70  RLK-DGKKVTPFHS--EASNYQWSP 91



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 75/201 (37%), Gaps = 29/201 (14%)

Query: 219 FSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +SP+Q+ +++        + D   +  V    +R +   + + N      AP      K 
Sbjct: 190 WSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEIVDQMLLNTEWFKWAPS-----KN 244

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREG-- 324
            L  ++    + + +  L+      L     T   +++   ++  D+  IV  +   G  
Sbjct: 245 ILAYIEGSGRVALENKHLKIKELPVLQQQTFTPKGYVDWDFTWKNDNVIIVSRAKEGGFE 304

Query: 325 -------KEQLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                     LY + S    Q +I++       + P++  + + + + +   +K  I + 
Sbjct: 305 TLPEKRPFPSLYEINSTSDKQYQITKSSNKQGDYHPIFMKKSNQLIWIRSDRKKANIWIA 364

Query: 377 KKDGSQERLLVEDSNLQAPTW 397
             DG  E+  +E  N+  P W
Sbjct: 365 HSDGKHEKKWIE--NVDIPEW 383


>gi|229175030|ref|ZP_04302548.1| TolB domain protein [Bacillus cereus MM3]
 gi|228608398|gb|EEK65702.1| TolB domain protein [Bacillus cereus MM3]
          Length = 425

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 67/163 (41%), Gaps = 23/163 (14%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG +       D  + I          +++T   +I     +S D   I   S  +GK+Q
Sbjct: 40  NGVKVAFIRHHDLWVKI------DGKEKQITKGEYI-TGPKWSHDGEWI---SYAKGKKQ 89

Query: 328 --LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             L + +     + R  Q + ++Y    WSP+ ++IAF  FS       V  K+   E +
Sbjct: 90  NTLELYRLEDGKKVRPLQSEVSNY---QWSPKENIIAFV-FSNTLNTFDVKNKNTDFENV 145

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSIDLN 424
               + +    W P G+  + S +      G TG++LY + ++
Sbjct: 146 ---SAGVGDYAWYPDGKKFLVSSEAHLLPTGWTGAQLYEVQID 185



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 85/240 (35%), Gaps = 51/240 (21%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L V   DG   +     + + +  P++S + + ++YA    ++ L +Y ++     
Sbjct: 48  RHHDLWV-KIDGKEKQIT---KGEYITGPKWSHDGEWISYAKGKKQNTLELYRLEDG--- 100

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++   +S +   ++S                 + + D+++       NT F N+SA 
Sbjct: 101 --KKVRPLQSEVSNYQWSPKENIIAFVFSN----TLNTFDVKNK------NTDFENVSAG 148

Query: 308 ----SYSPDSSQIVFESDREGKEQLYV------------MQSNGSDQKRISQDKEASYFD 351
               ++ PD  + +  S+       +             M  +         ++   +  
Sbjct: 149 VGDYAWYPDGKKFLVSSEAHLLPTGWTGAQLYEVQIDAHMNPHKMKHLYALPNEHDDFLA 208

Query: 352 PV-----WSPQGDLIAF-----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNLQAPT 396
            V     WSP    I+F       +S +   + +++ DGS      + LL       AP+
Sbjct: 209 LVASGFEWSPDQRWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFKWAPS 268



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 10/88 (11%)

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +AF +       + V K DG +E+ + +   +  P WS  G  + +++ K      
Sbjct: 40  NGVKVAFIRH----HDLWV-KIDG-KEKQITKGEYITGPKWSHDGEWISYAKGKK-QNTL 92

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVG 444
           +LY ++ +G+    + +    S+ QW  
Sbjct: 93  ELYRLE-DGKKVRPLQS--EVSNYQWSP 117


>gi|213423545|ref|ZP_03356525.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 258

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 105 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 164

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 165 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGKIDFLTAR 220

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 221 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 258



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 145 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 202

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 203 --RIACCDAQSGKIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 254



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 129 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 188

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        +ID    R  N  S   A  FS +G+      + 
Sbjct: 189 WHPSGKWLGLVL--ENRIACCDAQSGKIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 245

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 246 KGFRQLWV 253


>gi|16762511|ref|NP_458128.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29144000|ref|NP_807342.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213426324|ref|ZP_03359074.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213649778|ref|ZP_03379831.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213850307|ref|ZP_03381205.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|25333261|pir||AC0961 probable ATP/GTP-binding protein STY3967 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16504816|emb|CAD03183.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29139636|gb|AAO71202.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 408

 Score = 57.0 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGKIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGKIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 404



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        +ID    R  N  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGKIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|145602624|ref|XP_364673.2| hypothetical protein MGG_09518 [Magnaporthe oryzae 70-15]
 gi|145011018|gb|EDJ95674.1| hypothetical protein MGG_09518 [Magnaporthe oryzae 70-15]
          Length = 460

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 6/159 (3%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +  + + +    I   +FS +G +   S   DE++ I+S+         L        +
Sbjct: 201 SQVIQELSSGAGEIWQIQFSHDGTKLASSGS-DESVIIWSLSPP-RILHTLGGHQTGVGN 258

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPD S ++    R+   + +   +      R  +  E      +W+  G  +    F
Sbjct: 259 IAWSPDDSMLITC-GRDRYARFW--DTRTGTLIRKLEQFEEPVSSCIWAADGQSVILGSF 315

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             E+ ++     DG++     +    +    SP GR L+
Sbjct: 316 DRER-SLCQWDLDGARVCTWTKKHRTEDVAVSPDGRWLV 353



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 61/173 (35%), Gaps = 16/173 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S    +++ +FS +  K+A +  D+     V +      R    +G  ++ +    +S
Sbjct: 207 LSSGAGEIWQIQFSHDGTKLASSGSDE----SVIIWSLSPPRILHTLGGHQTGVGNIAWS 262

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFES-DREG 324
            +     I+  +D     +  D ++     +L        S  ++ D   ++  S DRE 
Sbjct: 263 PDDSML-ITCGRDRYARFW--DTRTGTLIRKLEQFEEPVSSCIWAADGQSVILGSFDRE- 318

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              L     +G   +  +  K+    D   SP G  +       E+  I V  
Sbjct: 319 -RSLCQWDLDG--ARVCTWTKKHRTEDVAVSPDGRWLV---AMDEQSKIHVYN 365


>gi|260769966|ref|ZP_05878899.1| oligogalacturonate lyase [Vibrio furnissii CIP 102972]
 gi|260615304|gb|EEX40490.1| oligogalacturonate lyase [Vibrio furnissii CIP 102972]
          Length = 389

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 25/192 (13%), Positives = 65/192 (33%), Gaps = 32/192 (16%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG N+R +   +  +      + P+   +AY +
Sbjct: 199 PFDDSTVGFCHEGPHDLVDARMWLVNEDGTNVRMIKEHAPGESCTHEFWIPDGSAMAYVS 258

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---------------I 274
           Y      R +Y  +       + +       L   F  +G   +                
Sbjct: 259 YFKGQTERVIYKANPETLENEEVMVMPPCSHLMSNF--DGTLMVGDGCDAPVDVADAESY 316

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTL-FINI----------SASYSPDSSQIVFESDRE 323
            ++ D    +Y ++ ++ +  +L       ++            S++P  + ++F SD E
Sbjct: 317 DIEND--PFLYIMNTKTKSYAKLAKHNTSWDVLDGDRQITHPHPSFTPGDTGVLFTSDFE 374

Query: 324 GKEQLYVMQSNG 335
           G   +Y+     
Sbjct: 375 GVPAIYIADVPT 386



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 69/199 (34%), Gaps = 28/199 (14%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F+++G + L +   D   + Y  DL +    +LT     N    +  D  +  F    E 
Sbjct: 45  FTTDGSKLLFAGDFDGNRNYYLADLNTQQATQLTEGKGDNTFGGFISDDDRSFFYVKNE- 103

Query: 325 KEQLYVMQSNGSDQKRIS-----QDKEASYFDPV--------------WSPQGDLIAFTK 365
              L  +     +++ I           ++                  W P      F +
Sbjct: 104 -LNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSACTKLVGIEILKRDWQPLTSWEKFAE 162

Query: 366 FSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYS 420
           F        ++K D   G  E +  E++ L  P + P    ++ F  +   D   ++++ 
Sbjct: 163 FYHTNPTCRLIKVDIQTGELEVIHQENAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWL 222

Query: 421 IDLNGRNETLI--NTPAYA 437
           ++ +G N  +I  + P  +
Sbjct: 223 VNEDGTNVRMIKEHAPGES 241



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 86/240 (35%), Gaps = 34/240 (14%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F+ +  K+ +A   D +  R Y +     +   ++   +       F S+  R
Sbjct: 38  NYFYQKCFTTDGSKLLFAGDFDGN--RNYYLADLNTQQATQLTEGKGDNTFGGFISDDDR 95

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL-------------------TNTLFINI-SASYSP 311
           +   V+ +  +++  VDL++   + +                   T  + I I    + P
Sbjct: 96  SFFYVKNE--LNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSACTKLVGIEILKRDWQP 153

Query: 312 DSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
            +S   F          +L  +     + + I Q+  A    P++ P     + F     
Sbjct: 154 LTSWEKFAEFYHTNPTCRLIKVDIQTGELEVIHQE-NAWLGHPIYRPFDDSTVGFCHEGP 212

Query: 369 EKF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSID 422
                  + ++ +DG+  R++ E +  ++ T   W P G ++ +     G T   +Y  +
Sbjct: 213 HDLVDARMWLVNEDGTNVRMIKEHAPGESCTHEFWIPDGSAMAYVSYFKGQTERVIYKAN 272



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 24/238 (10%), Positives = 65/238 (27%), Gaps = 37/238 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           + P      +A +   +     +         + I    + +  P +   +        +
Sbjct: 151 WQPLTSWEKFAEFYHTNPTCRLIKVDIQTGELEVIHQENAWLGHPIYRPFDDSTVGFCHE 210

Query: 278 KDEA---MDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ V+        +             + PD S + + S  +G+ +  +Y 
Sbjct: 211 GPHDLVDARMWLVNEDGTNVRMIKEHAPGESCTHEFWIPDGSAMAYVSYFKGQTERVIYK 270

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMK 377
                 + + +      S+    +   G L+              E + I       +M 
Sbjct: 271 ANPETLENEEVMVMPPCSHLMSNF--DGTLMVGDGCDAPVDVADAESYDIENDPFLYIMN 328

Query: 378 KDGSQERLLVEDSNLQ------------APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   L + +                P+++P    ++F+   +G     +Y  D+
Sbjct: 329 TKTKSYAKLAKHNTSWDVLDGDRQITHPHPSFTPGDTGVLFTSDFEG--VPAIYIADV 384



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 41/134 (30%), Gaps = 13/134 (9%)

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           Q+ FES  +   Q+ V +   +D           ++   ++  G  + F           
Sbjct: 10  QLTFESFIDSDTQVKVTRLTPTDVI----CHRNYFYQKCFTTDGSKLLFAGDFDGNRNYY 65

Query: 375 VMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +   +  Q   L E           S   RS  + + +       L  +DL    E +I 
Sbjct: 66  LADLNTQQATQLTEGKGDNTFGGFISDDDRSFFYVKNE-----LNLMKVDLETLEEQVIY 120

Query: 433 T--PAYASDPQWVG 444
           T    +     WV 
Sbjct: 121 TVDEEWKGYGTWVA 134


>gi|240136961|ref|YP_002961430.1| putative Acylaminoacyl-peptidase [Methylobacterium extorquens AM1]
 gi|240006927|gb|ACS38153.1| putative Acylaminoacyl-peptidase [Methylobacterium extorquens AM1]
          Length = 626

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 35/103 (33%), Gaps = 4/103 (3%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG---VMKKDGSQERLLVEDSNLQAP 395
            R       + +    SP G  + +         I    +   D +          + A 
Sbjct: 6   PRAHLFGNPTRYGHQISPDGRRLGWVAPHEGVLNIWSAPIDDLDAAVPVTTDRRRGIDAY 65

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYA 437
            ++  GR L++ +  DGD    LY++DL  G    L   P  A
Sbjct: 66  AFAYDGRHLLYVQDADGDENHHLYAVDLTTGERRDLTPIPGIA 108



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 64/182 (35%), Gaps = 12/182 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNT--LFINISASYSPDSSQIVFESDR 322
           S +G+R       +  ++I+S  +   +A   +T      I+  A ++ D   +++  D 
Sbjct: 22  SPDGRRLGWVAPHEGVLNIWSAPIDDLDAAVPVTTDRRRGIDAYA-FAYDGRHLLYVQDA 80

Query: 323 EG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIGVMK 377
           +G     LY +     +++ ++     +      S       L+A          +  + 
Sbjct: 81  DGDENHHLYAVDLTTGERRDLTPIPGIAAAIVGLSRIVRDRVLVAINDRDPRFHDLHSID 140

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
               +  L++E+       +    R  + F+ +   D  S+L + D       L   P  
Sbjct: 141 LATGERSLVIENPGFAG--FLIDERYAVRFAFRNLPDGSSQLIAPDGANWKPWLTFPPED 198

Query: 437 AS 438
           A 
Sbjct: 199 AR 200


>gi|194226643|ref|XP_001494548.2| PREDICTED: similar to WD repeat domain 51B [Equus caballus]
          Length = 465

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 41/254 (16%), Positives = 92/254 (36%), Gaps = 17/254 (6%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           ++   +Q +   K    +   F + S         L + +       +       ++   
Sbjct: 1   MASATFQRVFSPKPG--THTAFTTAS-----WDTFLMLWNFKPQARAFRYVGHKDVVTSV 53

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FSP    +A A+ D    +R+++ D R   +  +       + +  FS++G+    +  
Sbjct: 54  QFSPLGNLLASASRD--RTVRLWIPDKRGKSSEFKAHTAP--VRSVDFSADGQFLA-TAS 108

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D+++ ++++  Q      L         A +SPD   IV  S+    + + +  +    
Sbjct: 109 EDKSIKVWNMYRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSE---DKTIKIWDTTNKQ 164

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 D         ++P G  IA +  S     I  ++ +   +   V  S +   ++
Sbjct: 165 CVNNFSDSLGFANFVDFNPNGTCIA-SAGSDHTVKIWDIRVNKLLQHYRVHSSGVNCVSF 223

Query: 398 SPSGRSLIFSRKKD 411
            PSG  LI +    
Sbjct: 224 HPSGNYLITASSDG 237



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 57/177 (32%), Gaps = 9/177 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     S+ V +       Y        +   +FSP+ + +   + D      + + DT 
Sbjct: 106 TASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK----TIKIWDTT 161

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +      +         F+ NG     S   D  + I+ + +         ++  +N 
Sbjct: 162 NKQCVNNFSDSLGFANFVDFNPNGTCIA-SAGSDHTVKIWDIRVNKLLQHYRVHSSGVNC 220

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             S+ P  + ++  +  +G   L ++           Q      F   +S  G+L A
Sbjct: 221 V-SFHPSGNYLI-TASSDGT--LKILDLLEGRLIYTLQGHTGPVFTVSFSKGGELFA 273


>gi|198245334|ref|YP_002217760.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|207859036|ref|YP_002245687.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|197939850|gb|ACH77183.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|206710839|emb|CAR35203.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|326625549|gb|EGE31894.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 408

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGKIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGKIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 404



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        +ID    R  N  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGKIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|304383837|ref|ZP_07366295.1| OmpA family protein [Prevotella marshii DSM 16973]
 gi|304335093|gb|EFM01365.1| OmpA family protein [Prevotella marshii DSM 16973]
          Length = 689

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 45/237 (18%), Positives = 80/237 (33%), Gaps = 36/237 (15%)

Query: 222 NQQKVAYATYDDEDIL-RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           N Q+  ++     D   R+Y   TR +     + +   M              +S + D 
Sbjct: 161 NSQRADFSPVLAGDSYDRLYFTSTRKEALGTEVSDITGMKAG--------DIFVSEKNDR 212

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV---FESDREGKEQLYVMQSNGSD 337
            + +    ++ +      NT +   S +++PD  ++      SD        +  S  +D
Sbjct: 213 GVWMKPHAVEGSL-----NTEYDEGSCAFTPDGREMYLTQCTSDPVAPRYAKIAVSTRAD 267

Query: 338 QK-------RISQDKEASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKD-GSQE 383
                     I++D  + Y  P  SP G  + FT            + I +     G  E
Sbjct: 268 ASWGKATIAEITRDTLSLYAHPAISPDGQWLYFTSNMPGGKGGLDLWRIRITSAGFGGVE 327

Query: 384 RL---LVEDSNLQAPTWSPSGRSLIFSRKK-DGDTGSKLYSIDLNGRNETLINTPAY 436
            L   +    N + PT+ P+G  L FS     G  G  +Y   +       +  P Y
Sbjct: 328 NLGEPINTAGNEEFPTFRPNGD-LYFSSDGFPGMGGLDIYVAKIKDNRRWHVEHPGY 383



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 67/208 (32%), Gaps = 25/208 (12%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID----RAPKRIG-- 254
           A I  +T     +   P  SP+ Q + + +        + L   RI        + +G  
Sbjct: 273 ATIAEITRDTLSLYAHPAISPDGQWLYFTSNMPGGKGGLDLWRIRITSAGFGGVENLGEP 332

Query: 255 -NFRSMILAPRFSSNGKRALISVQ---KDEAMDIYSVDLQSNATERL------TNTLFIN 304
            N       P F  NG     S         +DIY   ++ N    +       N+   +
Sbjct: 333 INTAGNEEFPTFRPNGD-LYFSSDGFPGMGGLDIYVAKIKDNRRWHVEHPGYPLNSQGDD 391

Query: 305 ISASYSPDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              ++    ++  F S+R    G + +Y    +  + + I   K   Y    +      +
Sbjct: 392 FGMTFEGLHNRGFFSSNRGDARGWDHIY----SFENPEIIQTVKGWVYEQEGYELTAAQV 447

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED 389
                 G    + V K DGS ++ +   
Sbjct: 448 YMVGNDGTNLKLNV-KGDGSFQQEVTAG 474



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 53/178 (29%), Gaps = 40/178 (22%)

Query: 304 NISASYSPDS-SQIVFESDREGKEQLYVMQSNGSDQKRI-------------------SQ 343
           + S   + DS  ++ F S R+      V    G     I                   S 
Sbjct: 166 DFSPVLAGDSYDRLYFTSTRKEALGTEVSDITGMKAGDIFVSEKNDRGVWMKPHAVEGSL 225

Query: 344 DKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGV---MKKDGSQERL--LVED--SN 391
           + E       ++P G  +  T+      +     I V         +  +  +  D  S 
Sbjct: 226 NTEYDEGSCAFTPDGREMYLTQCTSDPVAPRYAKIAVSTRADASWGKATIAEITRDTLSL 285

Query: 392 LQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLN----GRNETL---INTPAYASDPQ 441
              P  SP G+ L F+     G  G  L+ I +     G  E L   INT      P 
Sbjct: 286 YAHPAISPDGQWLYFTSNMPGGKGGLDLWRIRITSAGFGGVENLGEPINTAGNEEFPT 343


>gi|218246322|ref|YP_002371693.1| hypothetical protein PCC8801_1481 [Cyanothece sp. PCC 8801]
 gi|257059369|ref|YP_003137257.1| hypothetical protein Cyan8802_1508 [Cyanothece sp. PCC 8802]
 gi|218166800|gb|ACK65537.1| conserved hypothetical protein [Cyanothece sp. PCC 8801]
 gi|256589535|gb|ACV00422.1| hypothetical protein Cyan8802_1508 [Cyanothece sp. PCC 8802]
          Length = 499

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 75/220 (34%), Gaps = 29/220 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----SSNGKRAL 273
           +FS   +++AY           Y +     +   R       ++ P      S +   A 
Sbjct: 89  KFSWAGRRLAYTLETPVPYGETYQVQLSDAKERFRKQGQPGEVMQPFVGEFQSRDRALAY 148

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------- 326
           I  Q +E   +   +L       +T    + +   + P+ ++I+F +  +G+        
Sbjct: 149 IGTQGEEQGRLVFYNLTQQQKRMITPPELVVMDFQFYPEGNKILFSAFDKGRGIDGLREL 208

Query: 327 QLYVMQS------------NGSDQKRISQDKEASYFDPVWSPQGDLIA---FTKFSGEKF 371
           QLY + +                 + I  +++        S  G +I      + +   F
Sbjct: 209 QLYTVPTGVKEGIQKTEANETGTPELILDNQDYQNNQFELSADGKIIVVQRVNRKNPADF 268

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            + ++K+    ERL V          +P  ++L  +R + 
Sbjct: 269 DLWMLKEGNKPERLKVTGGQF---AIAPDSQTLAVARGEG 305


>gi|151946586|gb|EDN64808.1| TafII90 [Saccharomyces cerevisiae YJM789]
          Length = 798

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 68/218 (31%), Gaps = 18/218 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +   +      +   + +   D   D   K +      + +  FS + K  L S  +
Sbjct: 493 WSLDGSSL------NNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLL-SGSE 545

Query: 279 DEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D+ + ++S+D  +        N    ++S  +SP        S     +   +   +   
Sbjct: 546 DKTVRLWSMDTHTALVSYKGHNHPVWDVS--FSPLGHYFATASH---DQTARLWSCDHIY 600

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             RI            + P G  + FT  S +   +  +    S    L   + + +   
Sbjct: 601 PLRIFAGHLNDVDCVSFHPNGCYV-FTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAV 659

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            P GR L        D    ++ I   G+    +    
Sbjct: 660 CPDGRWL---STGSEDGIINVWDI-GTGKRLKQMRGHG 693



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 57/179 (31%), Gaps = 14/179 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   ++   FSP+ + +   + D    +R++ MDT       +  N    +    F
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSED--KTVRLWSMDTHTALVSYKGHNHP--VWDVSF 575

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREG 324
           S  G     +   D+   ++S D       R+      ++   S+ P+    VF    + 
Sbjct: 576 SPLGHYFA-TASHDQTARLWSCDHIY--PLRIFAGHLNDVDCVSFHPNGCY-VFTGSSDK 631

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             +++    +  D  R+     A        P G  ++     G    I V      + 
Sbjct: 632 TCRMW--DVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDG---IINVWDIGTGKR 685


>gi|119490023|ref|ZP_01622647.1| serine/threonine kinase with WD-40 repeat [Lyngbya sp. PCC 8106]
 gi|119454175|gb|EAW35327.1| serine/threonine kinase with WD-40 repeat [Lyngbya sp. PCC 8106]
          Length = 1908

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 61/194 (31%), Gaps = 12/194 (6%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           ++      + G     + V D +   +     +    +     +P+ + +          
Sbjct: 82  VISPDHKYIVGGSWKIVRVWDAETGELLRKFEADSHWVLSVAIAPDNKTII----TGGTD 137

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            ++ +   +   +   +    S +     S +GK+ + S   D+ + I+  DL +   + 
Sbjct: 138 SQIKIWSLQTGESLFTLEGHSSWVTTLAVSPDGKKLV-SGSCDKTLKIW--DLNTRKQQH 194

Query: 297 -LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            LT+      SA  S D       +       + +   N     +  ++          S
Sbjct: 195 TLTDHSGWICSAVISSDG----IIASGSTDNTIKLWNLNSGKLLQTLKEHSDWVQALAIS 250

Query: 356 PQGDLIAFTKFSGE 369
             G+ +     +GE
Sbjct: 251 SDGERLFSGSRNGE 264



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 87/259 (33%), Gaps = 53/259 (20%)

Query: 71  KDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            DL ++  F  ++ D+    + +PD               +V G              R+
Sbjct: 63  SDLTKNGNF-PVATDTITSIVISPDHK------------YIVGGSWKI---------VRV 100

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           WD +  + +                     D +          +  I   ++++++G   
Sbjct: 101 WDAETGELL----------------RKFEADSH-------WVLSVAIAPDNKTIITGGTD 137

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           + + +         +        +     SP+ +K+   + D    L+++ ++TR  +  
Sbjct: 138 SQIKIWSLQTGESLFTLEGHSSWVTTLAVSPDGKKLVSGSCD--KTLKIWDLNTRKQQHT 195

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             + +    I +   SS+G   + S   D  + +++++      + L        + + S
Sbjct: 196 --LTDHSGWICSAVISSDG--IIASGSTDNTIKLWNLN-SGKLLQTLKEHSDWVQALAIS 250

Query: 311 PDSSQIVFESDREGKEQLY 329
            D  ++ F   R G+ + +
Sbjct: 251 SDGERL-FSGSRNGEIKFW 268



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 44/133 (33%), Gaps = 10/133 (7%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            S   SPD   IV      G  ++  V  +   +  R  +           +P    I  
Sbjct: 79  TSIVISPDHKYIV-----GGSWKIVRVWDAETGELLRKFEADSHWVLSVAIAPDNKTII- 132

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           T  +  +  I  ++   S   L    S +     SP G+ L+       D   K++ ++ 
Sbjct: 133 TGGTDSQIKIWSLQTGESLFTLEGHSSWVTTLAVSPDGKKLV---SGSCDKTLKIWDLNT 189

Query: 424 NGRNETLINTPAY 436
             +  TL +   +
Sbjct: 190 RKQQHTLTDHSGW 202


>gi|290878215|emb|CBK39274.1| Taf5p [Saccharomyces cerevisiae EC1118]
          Length = 798

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 68/218 (31%), Gaps = 18/218 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +   +      +   + +   D   D   K +      + +  FS + K  L S  +
Sbjct: 493 WSLDGSSL------NNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLL-SGSE 545

Query: 279 DEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D+ + ++S+D  +        N    ++S  +SP        S     +   +   +   
Sbjct: 546 DKTVRLWSMDTHTALVSYKGHNHPVWDVS--FSPLGHYFATASH---DQTARLWSCDHIY 600

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             RI            + P G  + FT  S +   +  +    S    L   + + +   
Sbjct: 601 PLRIFAGHLNDVDCVSFHPNGCYV-FTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAV 659

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            P GR L        D    ++ I   G+    +    
Sbjct: 660 CPDGRWL---STGSEDGIINVWDI-GTGKRLKQMRGHG 693



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 57/179 (31%), Gaps = 14/179 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   ++   FSP+ + +   + D    +R++ MDT       +  N    +    F
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSED--KTVRLWSMDTHTALVSYKGHNHP--VWDVSF 575

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREG 324
           S  G     +   D+   ++S D       R+      ++   S+ P+    VF    + 
Sbjct: 576 SPLGHYFA-TASHDQTARLWSCDHIY--PLRIFAGHLNDVDCVSFHPNGCY-VFTGSSDK 631

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             +++    +  D  R+     A        P G  ++     G    I V      + 
Sbjct: 632 TCRMW--DVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDG---IINVWDIGTGKR 685


>gi|19338607|gb|AAL86724.1|AF416776_2 unknown [Methylobacterium extorquens AM1]
          Length = 626

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 35/103 (33%), Gaps = 4/103 (3%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG---VMKKDGSQERLLVEDSNLQAP 395
            R       + +    SP G  + +         I    +   D +          + A 
Sbjct: 6   PRAHLFGNPTRYGHQISPDGRRLGWVAPHEGVLNIWSAPIDDLDAAVPVTTDRRRGIDAY 65

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYA 437
            ++  GR L++ +  DGD    LY++DL  G    L   P  A
Sbjct: 66  AFAYDGRHLLYVQDADGDENHHLYAVDLTTGERRDLTPIPGIA 108



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 64/182 (35%), Gaps = 12/182 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNT--LFINISASYSPDSSQIVFESDR 322
           S +G+R       +  ++I+S  +   +A   +T      I+  A ++ D   +++  D 
Sbjct: 22  SPDGRRLGWVAPHEGVLNIWSAPIDDLDAAVPVTTDRRRGIDAYA-FAYDGRHLLYVQDA 80

Query: 323 EG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIGVMK 377
           +G     LY +     +++ ++     +      S       L+A          +  + 
Sbjct: 81  DGDENHHLYAVDLTTGERRDLTPIPGIAAAIVGLSRIVRDRVLVAINDRDPRFHDLHSID 140

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
               +  L++E+       +    R  + F+ +   D  S+L + D       L   P  
Sbjct: 141 LATGERSLVIENPGFAG--FLIDERYAVRFAFRNLPDGSSQLIAPDGANWKPWLTFPPED 198

Query: 437 AS 438
           A 
Sbjct: 199 AR 200


>gi|329889898|ref|ZP_08268241.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein
           [Brevundimonas diminuta ATCC 11568]
 gi|328845199|gb|EGF94763.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein
           [Brevundimonas diminuta ATCC 11568]
          Length = 685

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 17/123 (13%)

Query: 258 SMILAPRFSSNGKRALI-----SVQKDEAMDIYSVD-----------LQSNATERLTNTL 301
             I  P  S +G R        S++++     + V                   R ++  
Sbjct: 36  GDISNPVISPDGGRVAFRVERASIERNSYTSGWYVASLRTQTGAVSVGDGGEPLRDSSGY 95

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I  +  +SPDS  I + +   G+ Q++   ++GS  ++++ D EA       S  G  +
Sbjct: 96  SIGDTPQWSPDSIWIYYRALLNGEVQVWRAAADGSRVEQVTSD-EADVDAFQLSRDGRRL 154

Query: 362 AFT 364
            ++
Sbjct: 155 LYS 157



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 16/118 (13%)

Query: 306 SASYSPDSSQIVFESDREG---------------KEQLYVMQSNGSDQKRISQDKEASYF 350
           +   SPD  ++ F  +R                 + Q   +      +        +   
Sbjct: 40  NPVISPDGGRVAFRVERASIERNSYTSGWYVASLRTQTGAVSVGDGGEPLRDSSGYSIGD 99

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFS 407
            P WSP    I +      +  +     DGS+ E++  +++++ A   S  GR L++S
Sbjct: 100 TPQWSPDSIWIYYRALLNGEVQVWRAAADGSRVEQVTSDEADVDAFQLSRDGRRLLYS 157



 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 15/120 (12%), Positives = 38/120 (31%), Gaps = 14/120 (11%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYL--------------MDTRIDRAPKRIGNFRSM 259
           +  P  SP+  +VA+           Y               +       P R  +  S+
Sbjct: 38  ISNPVISPDGGRVAFRVERASIERNSYTSGWYVASLRTQTGAVSVGDGGEPLRDSSGYSI 97

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              P++S +          +  + ++      +  E++T+      +   S D  ++++ 
Sbjct: 98  GDTPQWSPDSIWIYYRALLNGEVQVWRAAADGSRVEQVTSDEADVDAFQLSRDGRRLLYS 157



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 35/110 (31%), Gaps = 19/110 (17%)

Query: 347 ASYFDPVWSPQGDLIAFT---------KFSGEKFAI-------GVMKKDGSQERLLVEDS 390
               +PV SP G  +AF           ++   +          V   DG +        
Sbjct: 36  GDISNPVISPDGGRVAFRVERASIERNSYTSGWYVASLRTQTGAVSVGDGGEPLRDSSGY 95

Query: 391 NL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           ++   P WSP    + +    +G+   +++    +G     + +     D
Sbjct: 96  SIGDTPQWSPDSIWIYYRALLNGEV--QVWRAAADGSRVEQVTSDEADVD 143



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 9/114 (7%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            +  + E+  + S     S    +G       V   DG        S   I   P++SP+
Sbjct: 54  VERASIERNSYTSGWYVASLRTQTG------AVSVGDGGEP-LRDSSGYSIGDTPQWSPD 106

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              + Y    + ++              +++ +  + + A + S +G+R L SV
Sbjct: 107 SIWIYYRALLNGEVQ--VWRAAADGSRVEQVTSDEADVDAFQLSRDGRRLLYSV 158


>gi|260655555|ref|ZP_05861043.1| prolyl oligopeptidase family protein [Jonquetella anthropi E3_33
           E1]
 gi|260630003|gb|EEX48197.1| prolyl oligopeptidase family protein [Jonquetella anthropi E3_33
           E1]
          Length = 637

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 89/247 (36%), Gaps = 17/247 (6%)

Query: 188 IIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
             + ++ V   DG    R +T + ++ +    +  ++  V    +  ++   +Y+     
Sbjct: 65  KDRFNVMVAPVDGSQPARRVTAATERDIRSYGWVNDETIVYAQDFGGDENYHLYVTPADG 124

Query: 247 DRAPKRIGNFRSMILAPRFS-----SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             APK +  F+  + A               L++ +  E  D Y  ++++    RLT+  
Sbjct: 125 SSAPKDLAPFKG-VRASVLDDLEDDPEHILILMNKENPEVFDAYRANVKTGELTRLTDNP 183

Query: 302 FINISASYSPDSS-QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              +      D   ++ + SD      LY    +   ++  S D + S     ++     
Sbjct: 184 GNMVGWGTDNDGHIRLAYVSDGLTSRVLYRENESEKFREIFSSDFKDSIEPVGFTGDNKK 243

Query: 361 IAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           I      G  + A+ +      ++ L+   ++            +++S+ +    G   Y
Sbjct: 244 IYLLSNLGHDYSALYLYDPQTKKQDLICSFTDRDV-------SGILWSQARRTLLGVSWY 296

Query: 420 SIDLNGR 426
           + D +GR
Sbjct: 297 T-DRSGR 302



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 36/74 (48%), Gaps = 4/74 (5%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLV--EDSNLQAPTWSPSGRSLIFSRKKD 411
           SP G + ++ +   ++F + V   DGSQ  R +    + ++++  W     ++++++   
Sbjct: 52  SPNGKMYSWLEPWKDRFNVMVAPVDGSQPARRVTAATERDIRSYGWVND-ETIVYAQDFG 110

Query: 412 GDTGSKLYSIDLNG 425
           GD    LY    +G
Sbjct: 111 GDENYHLYVTPADG 124


>gi|171913801|ref|ZP_02929271.1| hypothetical protein VspiD_21520 [Verrucomicrobium spinosum DSM
           4136]
          Length = 862

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 45/281 (16%), Positives = 89/281 (31%), Gaps = 39/281 (13%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDIL 237
           F+     +      +     +G   R L P+        P+ SP+ +++AY +Y      
Sbjct: 57  FLVWERRTKSGAWEIWSKRINGGKERRLVPTESGRDHFCPKISPDGRRLAYLSYPRGSTG 116

Query: 238 R---------VYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQKDEAMDIYS 286
                     +++MD +  +        RS     A  +   G+  L  +        +S
Sbjct: 117 YPGHVGRYGVLWVMDLKSRKRRVVAAEARSYAEHRAVVWR--GEDRLCFIDNKGFTQEFS 174

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
             L +  T RL            SPD           G  +   +    ++ + +  ++ 
Sbjct: 175 --LSTGQTTRLLKQPSEVFGYLMSPDGRHAT-----SGTPEFARVD---TEAQTLWHEQR 224

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVED--------SNLQAPTW 397
            S   P ++       +   +G    +  M+    +  ++L +D        + +  P  
Sbjct: 225 QSGCQPYFTADSKWGFWMGGAGGP--VNKMRLATREIGQILQKDDERLHGKRNYIYFPMV 282

Query: 398 SPSGRSLIFSRKKDGD----TGSKLYSIDLNGRNETLINTP 434
           SP  R + F+   D          LY   LN     +I  P
Sbjct: 283 SPCQRLIAFAASPDSHDHFEADYDLYLAHLNPVTLEIIGNP 323



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 11/91 (12%)

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           G L+   +     + I   + +G +ER LV      +   P  SP GR L +     G T
Sbjct: 56  GFLVWERRTKSGAWEIWSKRINGGKERRLVPTESGRDHFCPKISPDGRRLAYLSYPRGST 115

Query: 415 G--------SKLYSIDLNGRNETLINTPAYA 437
           G          L+ +DL  R   ++   A +
Sbjct: 116 GYPGHVGRYGVLWVMDLKSRKRRVVAAEARS 146


>gi|317507067|ref|ZP_07964830.1| prolyl oligopeptidase [Segniliparus rugosus ATCC BAA-974]
 gi|316254642|gb|EFV13949.1| prolyl oligopeptidase [Segniliparus rugosus ATCC BAA-974]
          Length = 676

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 60/179 (33%), Gaps = 12/179 (6%)

Query: 167 TGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           T      +   L  S       G  + +L  +D      R L    +  L  P+ SP+Q 
Sbjct: 214 TTADIAADGSFLVTSFKRPEARGASRETLVWIDVASGESRVLQDDPEAHLLSPKISPDQT 273

Query: 225 KVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISV 276
           KVA+             + ++++        +++         P    +S +G+   +  
Sbjct: 274 KVAFLRESRSTPTEAPAVTLHVLSLADGGPARQLA--PGWDRWPGEIAWSRDGEALFVVA 331

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +D    ++ V +  +A  R+T   F   + +   D +     S          + ++G
Sbjct: 332 DEDGRAPLFRVAVDGSAPVRVTADDFAYAAIAPVSDGTVFALRSSYLRPPHPVRIGADG 390



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 57/158 (36%), Gaps = 16/158 (10%)

Query: 268 NGKRALISVQKDEAM-----DIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESD 321
           +G   + S ++ EA       +  +D+ S  +  L +    ++ S   SPD +++ F  +
Sbjct: 221 DGSFLVTSFKRPEARGASRETLVWIDVASGESRVLQDDPEAHLLSPKISPDQTKVAFLRE 280

Query: 322 REGKEQ------LYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                       L+V+  ++G   ++++   +    +  WS  G+ +        +  + 
Sbjct: 281 SRSTPTEAPAVTLHVLSLADGGPARQLAPGWDRWPGEIAWSRDGEALFVVADEDGRAPLF 340

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSP--SGRSLIFSRKK 410
            +  DGS    +  D +      +P   G         
Sbjct: 341 RVAVDGSAPVRVTAD-DFAYAAIAPVSDGTVFALRSSY 377



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 46/325 (14%), Positives = 84/325 (25%), Gaps = 66/325 (20%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-- 234
           ++            ++L   D  GA         ++    P F+ +   +  ++      
Sbjct: 36  LVVAQLDEKKSKFVSALWETDPAGARRARRIAFSERGESAPVFAADGSLLFLSSRGSGEG 95

Query: 235 --DILRVYLMDTRIDRAPKRIGNFRSMILA--PR-------------------------- 264
             D      +          +  F   +    P                           
Sbjct: 96  GEDPPASLWLLPAEGGEASEVAKFPGAVTGVFPAGAAATTVVTAQTLSGASGAESDEQLR 155

Query: 265 -FSSNGKR--ALIS------VQKDEAMDIYSVDLQSNATERLTNTLF---------INIS 306
                GK    L +         D   +   + L       LT                +
Sbjct: 156 KLRKEGKVSAILYTGYPVRFWDHDLGPEAPRLWLLGEEPVDLTPPPTGAQVRGGGLRETT 215

Query: 307 ASYSPDSSQIVFESDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           A  + D S +V    R       +E L  +     + + +  D EA    P  SP    +
Sbjct: 216 ADIAADGSFLVTSFKRPEARGASRETLVWIDVASGESRVLQDDPEAHLLSPKISPDQTKV 275

Query: 362 AFTKFSGEK------FAIGVMKK-DGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDG 412
           AF + S           + V+   DG   R L    +       WS  G +L     +DG
Sbjct: 276 AFLRESRSTPTEAPAVTLHVLSLADGGPARQLAPGWDRWPGEIAWSRDGEALFVVADEDG 335

Query: 413 DTGSKLYSIDLNGRNETLINTPAYA 437
                L+ + ++G     +    +A
Sbjct: 336 RAP--LFRVAVDGSAPVRVTADDFA 358



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 79/297 (26%), Gaps = 72/297 (24%)

Query: 218 RFSPNQQK--VAYATYDDEDILRV---YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+  +  +  A  D++    V   +  D    R  +RI        AP F+++G   
Sbjct: 26  AVSPDGSRAVLVVAQLDEKKSKFVSALWETDPAGARRARRIAFSERGESAPVFAADGSLL 85

Query: 273 LISVQKDEA------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------- 319
            +S +            ++ +  +      +            +  ++  V         
Sbjct: 86  FLSSRGSGEGGEDPPASLWLLPAEGGEASEVAKFPGAVTGVFPAGAAATTVVTAQTLSGA 145

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP----------------------- 356
           S  E  EQL  ++  G     +       ++D    P                       
Sbjct: 146 SGAESDEQLRKLRKEGKVSAILYTGYPVRFWDHDLGPEAPRLWLLGEEPVDLTPPPTGAQ 205

Query: 357 ---------------QGDLIAFT-----KFSGEKFAIGVMKKDGSQERLLVEDSNLQ--A 394
                           G  +  +          +  +  +     + R+L +D      +
Sbjct: 206 VRGGGLRETTADIAADGSFLVTSFKRPEARGASRETLVWIDVASGESRVLQDDPEAHLLS 265

Query: 395 PTWSPSGRSLIFSRKKDGDTGSK----LYSIDL-NGRNETLINTPAYASDP---QWV 443
           P  SP    + F R+            L+ + L +G     +  P +   P    W 
Sbjct: 266 PKISPDQTKVAFLRESRSTPTEAPAVTLHVLSLADGGPARQLA-PGWDRWPGEIAWS 321


>gi|255721389|ref|XP_002545629.1| transcription initiation factor TFIID subunit 5 [Candida tropicalis
           MYA-3404]
 gi|240136118|gb|EER35671.1| transcription initiation factor TFIID subunit 5 [Candida tropicalis
           MYA-3404]
          Length = 794

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 81/246 (32%), Gaps = 37/246 (15%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTP--------------SRDQILFEPRFSPNQQKV 226
           S    +G   + + +   DG  ++ +                     ++   FSP+ + +
Sbjct: 464 STMAAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQDNTRKLIGHSGPVYGVSFSPDNKYL 523

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
              + D    +R++ +DT       +       +   +FS  G    ++   D+   +++
Sbjct: 524 LSCSED--KTVRLWSLDTYTALVSYKGHTQP--VWDVKFSPLGHY-FVTASHDQTARLWA 578

Query: 287 VDLQSNATERLTNTLFINISA-SYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQ 343
            D       R+      ++    + P+S+  VF   SDR       +      +  R+  
Sbjct: 579 TDHIY--PLRIFAGHINDVDCVEFHPNSNY-VFTGSSDRT----CRMWDVQTGNCVRVFL 631

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSP 399
                      SP G  +A     GE   I V    GS  RL     + +A      +S 
Sbjct: 632 GHTNPVNCLAVSPDGRWLA---SGGEDGIICVWDI-GSGRRLKSMRGHARASIYSLAFSK 687

Query: 400 SGRSLI 405
            G  LI
Sbjct: 688 DGTVLI 693


>gi|229157971|ref|ZP_04286042.1| TolB domain protein [Bacillus cereus ATCC 4342]
 gi|228625424|gb|EEK82180.1| TolB domain protein [Bacillus cereus ATCC 4342]
          Length = 400

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 87/253 (34%), Gaps = 61/253 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY     +  L +Y +     +
Sbjct: 25  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSHDGEWLAYVKGKKQGSLELYRL-----K 75

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 +++ D++        NT F N+SA 
Sbjct: 76  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLHTFDVEKK------NTDFENVSAG 125

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD  +    S+       +     G+    + +D   +               
Sbjct: 126 VGDYAWYPDGKKFFVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 181

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQ 393
                      WSP    I+F       +S +   + +++ DGS+     ++L+     +
Sbjct: 182 DFLALVASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK 241

Query: 394 APTWSPSGRSLIF 406
              W+P+   L +
Sbjct: 242 ---WAPANNILAY 251



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAF +       + + K DG +E+ L +   +  P WS  G  L + + K      +LY
Sbjct: 20  KIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSHDGEWLAYVKGKK-QGSLELY 72

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 73  RLK-DGKKVTPFHS--EASNYQWSP 94


>gi|154321944|ref|XP_001560287.1| hypothetical protein BC1G_01119 [Botryotinia fuckeliana B05.10]
 gi|150850366|gb|EDN25559.1| hypothetical protein BC1G_01119 [Botryotinia fuckeliana B05.10]
          Length = 548

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 17/163 (10%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           ++ +Y  +   K   N R    S   V+  +  +L           +        +    
Sbjct: 385 ANKVYDWLATSKLLKNPREERPSRDRVNASMGATL-----------HTLEGHAHPVTSVA 433

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ +++   + D+     + L D       + +      + +  FS + K+ + S   
Sbjct: 434 FSPDSKQIVSGSLDN----TIKLWDITTGAMLQTLEGHTDSVTSVAFSPDSKQIV-SGSW 488

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           D  + ++   +     + L     I IS ++SPD  Q+V  SD
Sbjct: 489 DYKVRLWDT-MTGAMLQTLEGHTNIVISVAFSPDGKQVVSGSD 530



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 51/108 (47%), Gaps = 5/108 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S+ +VSG + N++ + D     +          +    FSP+ +++   ++D +    V 
Sbjct: 438 SKQIVSGSLDNTIKLWDITTGAMLQTLEGHTDSVTSVAFSPDSKQIVSGSWDYK----VR 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           L DT      + +    +++++  FS +GK+ ++S   D+ + ++ + 
Sbjct: 494 LWDTMTGAMLQTLEGHTNIVISVAFSPDGKQ-VVSGSDDKTVRLWDIS 540



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/148 (15%), Positives = 45/148 (30%), Gaps = 12/148 (8%)

Query: 278 KDEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           ++E      V+         L        S ++SPDS QIV  S       + +      
Sbjct: 402 REERPSRDRVNASMGATLHTLEGHAHPVTSVAFSPDSKQIVSGSL---DNTIKLWDITTG 458

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--A 394
              +  +    S     +SP    I    +    + + +           +E       +
Sbjct: 459 AMLQTLEGHTDSVTSVAFSPDSKQIVSGSWD---YKVRLWDTMTGAMLQTLEGHTNIVIS 515

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +SP G+ ++       D   +L+ I 
Sbjct: 516 VAFSPDGKQVVSGSD---DKTVRLWDIS 540



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 41/104 (39%), Gaps = 7/104 (6%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVF 318
           + +  FS + K+ + S   D  + ++  D+ + A  + L        S ++SPDS QIV 
Sbjct: 429 VTSVAFSPDSKQIV-SGSLDNTIKLW--DITTGAMLQTLEGHTDSVTSVAFSPDSKQIVS 485

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            S      ++ +  +      +  +          +SP G  + 
Sbjct: 486 GS---WDYKVRLWDTMTGAMLQTLEGHTNIVISVAFSPDGKQVV 526


>gi|78046413|ref|YP_362588.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78034843|emb|CAJ22488.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 844

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 86/253 (33%), Gaps = 26/253 (10%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRF 219
           DI +    E      RI   + +       + L ++   DG+  +         L +  +
Sbjct: 90  DIAEVAQPELKLAGLRIHPKTFAASRFSFASKLWLLSVVDGSERQIAGLPSPLSLADLSW 149

Query: 220 SPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQ 277
           SP+Q+ +A+   D       ++L+D    +A + +     S+    R+  +G   L+  Q
Sbjct: 150 SPDQRHLAFRREDAASGANELWLVDVAAGQARRLLAGLNTSVNDDLRWLPDGSGLLLQQQ 209

Query: 278 KDEAMDIYSVDLQ-SNATERLTNTLFINIS-ASYSP----DSSQIVFESDREGKEQLYVM 331
                   + D   +    + T+      S  +Y      ++   VFE    G+  +  +
Sbjct: 210 VAGQGAPPTRDATPTGPATQQTSAAAGVRSLPTYQDLLRNEADARVFEYYATGQPIIVTV 269

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIGVMKKDG 380
                  + +S      Y +   SP G  I  ++ S   F            I V+   G
Sbjct: 270 A---GQVRPVST--PGIYLNLSVSPDGRYIL-SERSERPFSYLVPVDNFPRRIQVLDLQG 323

Query: 381 SQERLLVEDSNLQ 393
              R + +   ++
Sbjct: 324 KPVRQIAQLPLVE 336



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/220 (14%), Positives = 75/220 (34%), Gaps = 17/220 (7%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--RFSSNGKRALISVQ--KDEAM 282
            +A        +++L+   +D + ++I    S +      +S + +      +     A 
Sbjct: 110 TFAASRFSFASKLWLLSV-VDGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASGAN 168

Query: 283 DIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQK 339
           +++ VD+ +    RL   L   +N    + PD S ++ +    G+       +       
Sbjct: 169 ELWLVDVAAGQARRLLAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPTRDATPTGPAT 228

Query: 340 RISQDKEASYFDPVWSP----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           + +         P +      + D   F  ++  +  I  +     Q R +         
Sbjct: 229 QQTSAAAGVRSLPTYQDLLRNEADARVFEYYATGQPIIVTVA---GQVRPVSTPGIYLNL 285

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           + SP GR ++   ++     S L  +D   R   +++   
Sbjct: 286 SVSPDGRYIL--SERSERPFSYLVPVDNFPRRIQVLDLQG 323



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 12/133 (9%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFS--GE 369
           +S+  F S      +L+++      +++I+      S  D  WSP    +AF +      
Sbjct: 113 ASRFSFAS------KLWLLSVVDGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASG 166

Query: 370 KFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              + ++     Q R L+     S      W P G  L+  ++  G            G 
Sbjct: 167 ANELWLVDVAAGQARRLLAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPTRDATPTGP 226

Query: 427 NETLINTPAYASD 439
                +  A    
Sbjct: 227 ATQQTSAAAGVRS 239



 Score = 37.7 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 33/83 (39%), Gaps = 3/83 (3%)

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            F+ + + + V+     Q   L    +L   +WSP  R L F R+      ++L+ +D+ 
Sbjct: 117 SFASKLWLLSVVDGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASGANELWLVDVA 176

Query: 425 GRNETLINTPAYAS---DPQWVG 444
                 +      S   D +W+ 
Sbjct: 177 AGQARRLLAGLNTSVNDDLRWLP 199


>gi|118087837|ref|XP_419389.2| PREDICTED: similar to WD repeat domain 26 [Gallus gallus]
          Length = 636

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 73/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT   +  K +      +   
Sbjct: 323 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYI 382

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 383 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 441

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    NG+    +    E      +W    G  +  +    +  G  F     
Sbjct: 442 RG---QFYQCDLNGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 490

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 491 --DLTDRNIVQEDHPIMSFTISKNGR 514


>gi|6319675|ref|NP_009757.1| Taf5p [Saccharomyces cerevisiae S288c]
 gi|586324|sp|P38129|TAF5_YEAST RecName: Full=Transcription initiation factor TFIID subunit 5;
           AltName: Full=TAFII-90; AltName: Full=TBP-associated
           factor 5; AltName: Full=TBP-associated factor 90 kDa
 gi|311674|emb|CAA79685.1| unknown [Saccharomyces cerevisiae]
 gi|536569|emb|CAA85160.1| TAF90 [Saccharomyces cerevisiae]
 gi|51013231|gb|AAT92909.1| YBR198C [Saccharomyces cerevisiae]
 gi|190408650|gb|EDV11915.1| transcription initiation factor TFIID subunit 5 [Saccharomyces
           cerevisiae RM11-1a]
 gi|207347572|gb|EDZ73698.1| YBR198Cp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256273789|gb|EEU08713.1| Taf5p [Saccharomyces cerevisiae JAY291]
 gi|285810529|tpg|DAA07314.1| TPA: Taf5p [Saccharomyces cerevisiae S288c]
 gi|1091232|prf||2020425A TATA box-binding protein-associated factor
          Length = 798

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 68/218 (31%), Gaps = 18/218 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +   +      +   + +   D   D   K +      + +  FS + K  L S  +
Sbjct: 493 WSLDGSSL------NNPNIALNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLL-SGSE 545

Query: 279 DEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D+ + ++S+D  +        N    ++S  +SP        S     +   +   +   
Sbjct: 546 DKTVRLWSMDTHTALVSYKGHNHPVWDVS--FSPLGHYFATASH---DQTARLWSCDHIY 600

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             RI            + P G  + FT  S +   +  +    S    L   + + +   
Sbjct: 601 PLRIFAGHLNDVDCVSFHPNGCYV-FTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAV 659

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            P GR L        D    ++ I   G+    +    
Sbjct: 660 CPDGRWL---STGSEDGIINVWDI-GTGKRLKQMRGHG 693



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 57/179 (31%), Gaps = 14/179 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   ++   FSP+ + +   + D    +R++ MDT       +  N    +    F
Sbjct: 520 TLVGHSGTVYSTSFSPDNKYLLSGSED--KTVRLWSMDTHTALVSYKGHNHP--VWDVSF 575

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREG 324
           S  G     +   D+   ++S D       R+      ++   S+ P+    VF    + 
Sbjct: 576 SPLGHYFA-TASHDQTARLWSCDHIY--PLRIFAGHLNDVDCVSFHPNGCY-VFTGSSDK 631

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             +++    +  D  R+     A        P G  ++     G    I V      + 
Sbjct: 632 TCRMW--DVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDG---IINVWDIGTGKR 685


>gi|300114381|ref|YP_003760956.1| hypothetical protein Nwat_1771 [Nitrosococcus watsonii C-113]
 gi|299540318|gb|ADJ28635.1| conserved hypothetical protein [Nitrosococcus watsonii C-113]
          Length = 887

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 83/264 (31%), Gaps = 54/264 (20%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP--SRDQILFEP---RFSPNQQKVAY 228
             R+  V+           L     DG N   L    S +     P     S +  ++A+
Sbjct: 174 YDRLSDVTARFWGFSAPGQLVYRKADG-NEEILYDCVSPEPRPCVPMDVSVSLDGTRIAF 232

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             Y         L + + +  P ++ N              K   +   +     I ++D
Sbjct: 233 TIYRAAR-----LYNQQPNTFPMKLPN--------------KSLAM---EGAEAQIVTLD 270

Query: 289 LQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKE-------------QLYVMQSN 334
           L +       +T    + +  + PD  +I+F S R G               QL++ +++
Sbjct: 271 LITGKLTAWPHTSGTWDTAPIWLPDG-RIMFASTRAGDWPSVLGSAGFHPALQLWIAKAD 329

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           GS+  R+   +  +   P    +   + ++ +           +     ++L    +   
Sbjct: 330 GSEAVRVGPHERDNAMHPWLHSKTGRVMYSSWQIVDMLPY---RSRGGLQVLFGTKDNFW 386

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKL 418
              S          ++ G+  ++L
Sbjct: 387 WVMSVD--------QRGGNLEAEL 402


>gi|163849753|ref|YP_001637796.1| peptidase S9 prolyl oligopeptidase [Methylobacterium extorquens
           PA1]
 gi|163661358|gb|ABY28725.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Methylobacterium extorquens PA1]
          Length = 626

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 35/103 (33%), Gaps = 4/103 (3%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG---VMKKDGSQERLLVEDSNLQAP 395
            R       + +    SP G  + +         I    +   D +          + A 
Sbjct: 6   PRAHLFGNPTRYGHQISPDGRRLGWVAPHEGVLNIWSAPIDDLDAAVPVTTDRRRGIDAY 65

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYA 437
            ++  GR L++ +  DGD    LY++DL  G    L   P  A
Sbjct: 66  AFAYDGRHLLYVQDADGDENHHLYAVDLTTGERRDLTPIPGIA 108



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 64/182 (35%), Gaps = 12/182 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNT--LFINISASYSPDSSQIVFESDR 322
           S +G+R       +  ++I+S  +   +A   +T      I+  A ++ D   +++  D 
Sbjct: 22  SPDGRRLGWVAPHEGVLNIWSAPIDDLDAAVPVTTDRRRGIDAYA-FAYDGRHLLYVQDA 80

Query: 323 EG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIGVMK 377
           +G     LY +     +++ ++     +      S       L+A          +  + 
Sbjct: 81  DGDENHHLYAVDLTTGERRDLTPIPGIAAAIVGLSRIVRDRVLVAINDRDPRFHDLHSID 140

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
               +  L++E+       +    R  + F+ +   D  S+L + D       L   P  
Sbjct: 141 LATGERSLVIENPGFAG--FLIDERYAVRFAFRNLPDGSSQLIAPDGANWKPWLTFPPED 198

Query: 437 AS 438
           A 
Sbjct: 199 AR 200


>gi|24021275|gb|AAN40985.1| signal peptide protein [Bradyrhizobium japonicum]
          Length = 367

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 82/230 (35%), Gaps = 15/230 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+ ++V            + ++D +     +RI           FS +GK A I    
Sbjct: 138 FTPDGKEV---WVTVRGENYISVIDPQSFEERRRITTPSGP-GMQMFSPDGKYAYICSSF 193

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   D+ +V  +     ++        + + +PD +Q+ F     G+ Q++  +   +  
Sbjct: 194 NPETDVVAV-AEHKIIAKVKQESPFCPNIAVTPDGNQVWFTLKDTGRTQVFNARPPFNPI 252

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW- 397
           + I      ++ +   + +G   A+    G    + V + D   +   +   NL    W 
Sbjct: 253 RTIDTGPITNHVNFAHTARGTF-AYVTI-GGLNQVKVFRTDDFSQVATIPVGNLPHGVWP 310

Query: 398 SPSGRSLIF-------SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           S  G  +             D  T S + ++ +    + +   P  A +P
Sbjct: 311 SGDGTRIYVGLENADALAAIDTATNSVVANVPIGQAPQAIAYVPGAAPNP 360



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 58/158 (36%), Gaps = 12/158 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A  +     +  +    T   +    IG          F+ +GK   ++V+ 
Sbjct: 96  FSPDHKMLAVVSIGSNSVTFIDT-ATNAVKHTTYIGRSPHEAF---FTPDGKEVWVTVR- 150

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                I  +D QS    R   T        +SPD       S    +  +  +    ++ 
Sbjct: 151 -GENYISVIDPQSFEERRRITTPSGPGMQMFSPDGKYAYICSSFNPETDVVAV----AEH 205

Query: 339 KRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIG 374
           K I++ K+ S F P    +P G+ + FT     +  + 
Sbjct: 206 KIIAKVKQESPFCPNIAVTPDGNQVWFTLKDTGRTQVF 243


>gi|159483209|ref|XP_001699653.1| centriole proteome protein [Chlamydomonas reinhardtii]
 gi|158281595|gb|EDP07349.1| centriole proteome protein [Chlamydomonas reinhardtii]
          Length = 393

 Score = 57.0 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 81/252 (32%), Gaps = 14/252 (5%)

Query: 160 DDIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           D   +       D  + + F      +V+G + N + V +       +        ++  
Sbjct: 1   DPTLERSFRGHKDAVTSVCFNHNMKQLVTGSLDNCVMVWNFKPQLRAFRFAGHKAGVYSV 60

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP    +A  + D      V L    ++     +      +    FSS+G+    +  
Sbjct: 61  AFSPVHALIASGSKDR----TVRLWQPTVEGKSTVLKAHTGTVRGVTFSSDGRMLA-TCS 115

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGS 336
            D+ + I+SV         LT           SPD    V      G ++ + +   N  
Sbjct: 116 DDKTVKIWSV-ATQKFAFTLTGHQNWVRCVHISPDGRLAV----SGGDDRTVRIWDLNSK 170

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
              R  +D         + P G  IA +  +     +  ++ +   +        +   +
Sbjct: 171 KVVRTFEDPTGLTNTVSFHPDGTCIA-SGSTDNSIKLWDLRSNVLLQHYRAHTGPVTHLS 229

Query: 397 WSPSGRSLIFSR 408
           + P+G  L+ S 
Sbjct: 230 FHPTGNFLLSSS 241



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 77/252 (30%), Gaps = 28/252 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           ++    + G ++     V   + SG    ++ +          +  +    +    FS +
Sbjct: 48  FRFAGHKAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKAHTGTVRGVTFSSD 107

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A  + D      V +      +    +   ++ +     S +G R  +S   D  +
Sbjct: 108 GRMLATCSDDK----TVKIWSVATQKFAFTLTGHQNWVRCVHISPDG-RLAVSGGDDRTV 162

Query: 283 DIYSVDLQSNATER-------LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            I+  DL S    R       LTNT+      S+ PD + I   S       + +     
Sbjct: 163 RIW--DLNSKKVVRTFEDPTGLTNTV------SFHPDGTCIASGST---DNSIKLWDLRS 211

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQ 393
           +   +  +          + P G+ +  +        + V      Q    +        
Sbjct: 212 NVLLQHYRAHTGPVTHLSFHPTGNFLLSSSLDTT---LKVWDLREGQLLYTLHGHEGATN 268

Query: 394 APTWSPSGRSLI 405
              +SP+G    
Sbjct: 269 GTAFSPAGDYFA 280


>gi|308808296|ref|XP_003081458.1| putative protein (ISS) [Ostreococcus tauri]
 gi|116059921|emb|CAL55980.1| putative protein (ISS) [Ostreococcus tauri]
          Length = 337

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 80/259 (30%), Gaps = 22/259 (8%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           +LG   L T          L    R WD    + ++  +  +   SW             
Sbjct: 69  ALGVVSLATSTDGLVAASALDGVIRAWDASTGETVLALE-SAPAESWGVA---FDPSSGS 124

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           +     G  + R+               L             TP   +      +SP+ +
Sbjct: 125 ANLAVAGGVSQRVNVHDARTGEKKQTMELPATTA-------ETPKNGRFAHCVAYSPDGK 177

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++A    D      V + D +  +    +    S +    FS +GK    +   D    +
Sbjct: 178 RIACGASDG----TVAIFDVKTGKCASSLTGHASPVRDLTFSPDGKTL-YTACDDGYAHV 232

Query: 285 YSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           Y  D  + +    L       +S +  PD + +V  S       + +   +   +  ++ 
Sbjct: 233 Y--DAHNKSLIDSLGGHKSWVLSVAAHPDGNALVTASS---DSTVTLWDLSSRARAHVAS 287

Query: 344 DKEASYFDPVWSPQGDLIA 362
           D+  + +   +SP G  +A
Sbjct: 288 DRADAAWCVRFSPDGTKLA 306



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 46/147 (31%), Gaps = 12/147 (8%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDR 322
            +S +GKR       D  + I+  D+++      LT         ++SPD   + + +  
Sbjct: 171 AYSPDGKRIA-CGASDGTVAIF--DVKTGKCASSLTGHASPVRDLTFSPDGKTL-YTACD 226

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G   +Y   ++           ++        P G+ +           + +       
Sbjct: 227 DGYAHVY--DAHNKSLIDSLGGHKSWVLSVAAHPDGNALVTASSDST---VTLWDLSSRA 281

Query: 383 ERLLVEDSNL--QAPTWSPSGRSLIFS 407
              +  D         +SP G  L  +
Sbjct: 282 RAHVASDRADAAWCVRFSPDGTKLACA 308



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 68/188 (36%), Gaps = 24/188 (12%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREG 324
           S++G   + +   D  +  +  D  +  T   L +    +   ++ P S           
Sbjct: 78  STDG--LVAASALDGVIRAW--DASTGETVLALESAPAESWGVAFDPSSGSANLAVAGGV 133

Query: 325 KEQLYVMQSNGSDQKRI---------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            +++ V  +   ++K+          +           +SP G  IA    S    AI  
Sbjct: 134 SQRVNVHDARTGEKKQTMELPATTAETPKNGRFAHCVAYSPDGKRIA-CGASDGTVAIFD 192

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +K       L    S ++  T+SP G++L ++   DG      Y+   +  N++LI++  
Sbjct: 193 VKTGKCASSLTGHASPVRDLTFSPDGKTL-YTACDDG------YAHVYDAHNKSLIDSLG 245

Query: 436 YASDPQWV 443
                 WV
Sbjct: 246 GHK--SWV 251


>gi|300864922|ref|ZP_07109766.1| WD-40 repeat protein [Oscillatoria sp. PCC 6506]
 gi|300337093|emb|CBN54916.1| WD-40 repeat protein [Oscillatoria sp. PCC 6506]
          Length = 744

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 43/262 (16%), Positives = 84/262 (32%), Gaps = 28/262 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    +L + D +  +           +     +P+ Q+V     D+     + + D +
Sbjct: 423 SGSSDKTLKIWDLETGDENLSFLGHLDWVNAVAITPDGQRVISGAGDN----NIKVWDLK 478

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                  I      I A   + +GKR  IS   D+ + ++  DL++      LT      
Sbjct: 479 TKTEICTISGHDDWIKAVAVTPDGKRL-ISGSGDKTIKVW--DLENAQEIYTLTGHEDWV 535

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--- 361
            S + +PDS +++  S   G + + +      ++                +  G  +   
Sbjct: 536 NSIAITPDSKRVISGS---GDKTIKLWNLETGEEILTIAGHTDGVKAVAVTLDGKRLISG 592

Query: 362 -------AFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
                   ++  +G      V       +   LL   S +     +  G+  I      G
Sbjct: 593 SGDHTLKIWSLEAGANIFTSVWNLVTGNKFFTLLGHTSFVNTVAVTADGKWAI-----SG 647

Query: 413 DTGSKLYSIDLNGRNETLINTP 434
              S +   DL G+ E    T 
Sbjct: 648 SRESTIKVWDLGGKKELFTLTG 669



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 80/254 (31%), Gaps = 27/254 (10%)

Query: 141 GKKFFSSPASWRKIAHTISDD-------IYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            K       + R  AH IS D       +   +   +      +L  +    +  ++   
Sbjct: 77  AKSLQLIQDTLRLSAHIISQDPAQLAGQLIGRLLSFQNIEIQALLEGARQQKNPWLQPLT 136

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
                 G+ +R         +     +P+ +K   A+ D      + + +         +
Sbjct: 137 ASFTPPGSRLRRTLVGHTDWVQAVAVTPDGKKAISASSDH----TLKIWNLATGEEIFTL 192

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SY 309
               + + A   + +G++ +IS   D  + I+  DL++   ++L      +  A    + 
Sbjct: 193 KGHLTYVNAVAVTPDGRK-VISGSWDNTIKIW--DLETG--QKLFTFRG-DTFAVEAVTV 246

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +PD ++++  S       + V            +   +       +  G  +        
Sbjct: 247 TPDGTKVISGS---WDGTIKVWNLATEQIIFNLKGHNSFVQTVAVTADGKRLI---SGSG 300

Query: 370 KFAIGVMKKDGSQE 383
             +I V   +  +E
Sbjct: 301 DHSIKVWNLETGKE 314



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 69/199 (34%), Gaps = 25/199 (12%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-----RLTNTL 301
            R  + +      + A   + +GK+  IS   D  + I+  +L +          LT   
Sbjct: 144 SRLRRTLVGHTDWVQAVAVTPDGKK-AISASSDHTLKIW--NLATGEEIFTLKGHLTYVN 200

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDL 360
            + +    +PD  +++  S       + +       QK  +   +    + V  +P G  
Sbjct: 201 AVAV----TPDGRKVISGS---WDNTIKIWDLETG-QKLFTFRGDTFAVEAVTVTPDGTK 252

Query: 361 IAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +    + G    I V      Q    L   +S +Q    +  G+ LI      GD   K+
Sbjct: 253 VISGSWDGT---IKVWNLATEQIIFNLKGHNSFVQTVAVTADGKRLI---SGSGDHSIKV 306

Query: 419 YSIDLNGRNETLINTPAYA 437
           ++++      TLI    + 
Sbjct: 307 WNLETGKELFTLIGHEDWV 325


>gi|296504846|ref|YP_003666546.1| hypothetical protein BMB171_C4017 [Bacillus thuringiensis BMB171]
 gi|296325898|gb|ADH08826.1| hypothetical protein BMB171_C4017 [Bacillus thuringiensis BMB171]
          Length = 412

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 90/253 (35%), Gaps = 61/253 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG  I+     + + +  P++S + + +AY     + IL +Y +     +
Sbjct: 35  RHHNLWI-KVDGKEIQIT---KGEYITGPKWSYDGEWLAYVKGKKQSILELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 +++ D++        NT F N+SA 
Sbjct: 86  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLHTFDVEKK------NTDFENVSAG 135

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD  +    S+       +     G+    + +D   +               
Sbjct: 136 VGDYAWYPDGKKFFVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 191

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQ 393
                      WSP    I+F       +S +   + +++ DGS+     ++L+     +
Sbjct: 192 DFLALVASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK 251

Query: 394 APTWSPSGRSLIF 406
              W+P+   L +
Sbjct: 252 ---WAPANNILAY 261



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       + + K DG + ++  +   +  P WS  G  L + + K   +  +LY
Sbjct: 30  KVAFIRH----HNLWI-KVDGKEIQI-TKGEYITGPKWSYDGEWLAYVKGKK-QSILELY 82

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 83  RLK-DGKKVTPFHS--EASNYQWSP 104


>gi|229111827|ref|ZP_04241373.1| TolB domain protein [Bacillus cereus Rock1-15]
 gi|228671583|gb|EEL26881.1| TolB domain protein [Bacillus cereus Rock1-15]
          Length = 399

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 90/253 (35%), Gaps = 61/253 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG  I+     + + +  P++S + + +AY     + IL +Y +     +
Sbjct: 22  RHHNLWI-KVDGKEIQIT---KGEYITGPKWSYDGEWLAYVKGKKQSILELYRL-----K 72

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 +++ D++        NT F N+SA 
Sbjct: 73  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLHTFDVEKK------NTDFENVSAG 122

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD  +    S+       +     G+    + +D   +               
Sbjct: 123 VGDYAWYPDGKKFFVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 178

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQ 393
                      WSP    I+F       +S +   + +++ DGS+     ++L+     +
Sbjct: 179 DFLALVASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKADQMLLNTQWFK 238

Query: 394 APTWSPSGRSLIF 406
              W+P+   L +
Sbjct: 239 ---WAPANNILAY 248



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       + + K DG + ++  +   +  P WS  G  L + + K   +  +LY
Sbjct: 17  KVAFIRH----HNLWI-KVDGKEIQI-TKGEYITGPKWSYDGEWLAYVKGKK-QSILELY 69

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 70  RLK-DGKKVTPFHS--EASNYQWSP 91



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 78/201 (38%), Gaps = 29/201 (14%)

Query: 219 FSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +SP+Q+ +++        + D   +  V    +R ++A + + N +    AP        
Sbjct: 190 WSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKADQMLLNTQWFKWAPA-----NN 244

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREG-- 324
            L  ++    + + +  L+      L     T   +++   ++  D+  IV  +   G  
Sbjct: 245 ILAYIEGSGRVALENKHLKVKELPALQQNTFTPKGYVDWDFTWKNDNVIIVSRAKEAGIE 304

Query: 325 -------KEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                     LY + S   +Q RI++       + P++  + + + + +   +K  + + 
Sbjct: 305 TPPEKRPLPSLYEIDSTSGEQHRITKLPHRQGDYHPLFMNKSNQLIWIRSDRKKADVWLA 364

Query: 377 KKDGSQERLLVEDSNLQAPTW 397
            KDG  E   +E  N+  P W
Sbjct: 365 HKDGKHEMKWIE--NIDVPEW 383


>gi|149063503|gb|EDM13826.1| WD repeat and SOCS box-containing 2, isoform CRA_a [Rattus
           norvegicus]
          Length = 411

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 82/217 (37%), Gaps = 25/217 (11%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ NG   L+S  +D+
Sbjct: 119 PDVSCLILATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDK 176

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 177 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 233

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---- 396
             +  ++S     +SP   L+    +      I      G + R L     L+AP     
Sbjct: 234 KLEGHQSSVVSCDFSPDSALLVTASYDTS--VIMWDPYTGERLRSLHHT-QLEAPVDDSD 290

Query: 397 ----------WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                     +SP G   ++      D   ++++++L
Sbjct: 291 VHMSSLRSVCFSPEG---LYLATVADDRLLRIWALEL 324



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 80/278 (28%), Gaps = 42/278 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT--------------------YDDEDILRVY 240
                         +   FSP+    A++                     ++ +      
Sbjct: 16  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCVVKLVPWPLEEQFIPKGFEAKSRSSKN 75

Query: 241 LMDTRIDRAPKRI---GNFRSMILAPRFSSNGKR---------------ALISVQKDEAM 282
               R     K +        +  +P  S   ++                L +   D  +
Sbjct: 76  DSKGRGSLKEKTLDCGQIVWGLAFSPWPSPPSRKLWLRHHPQVPDVSCLILATGLNDGQI 135

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P+ S I+  + R+   +++ +  +G   + +S
Sbjct: 136 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPNGSLILVSASRDKTLRIWDLNKHGKQIQVLS 194

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 195 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 252

Query: 403 SLIFSRKKDGDTGSKLYS-IDLNGRNETLINTPAYASD 439
            L+ +           Y+   L   + T +  P   SD
Sbjct: 253 LLVTASYDTSVIMWDPYTGERLRSLHHTQLEAPVDDSD 290


>gi|14586439|emb|CAC42932.1| dipeptidyl peptidase IV [Prevotella albensis]
          Length = 730

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 24/154 (15%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +  AS S +  Q++  S + GK+   +  ++      + +    S      SP G  +
Sbjct: 46  GTDQYASISSNRKQVIRYSFKTGKQTAVLFDADKVGNGLVEEIDGYS-----ISPDGKRL 100

Query: 362 A------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                  +      K    +      +   L    N Q PTWSP G  + F         
Sbjct: 101 LIQTHTEYVYRRSFKAVFYLYDIKSKKLAKLSACENQQIPTWSPDGSKIAFVYN------ 154

Query: 416 SKLYSIDLNGRNETLINTPAYASD-----PQWVG 444
           + +Y  D  G +ET + +    +      P WV 
Sbjct: 155 NNIYITD--GDHETQVTSDGKFNSIINGLPDWVY 186



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 55/153 (35%), Gaps = 22/153 (14%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +        S N+++V   ++       V     ++      +       +    S +GK
Sbjct: 45  EGTDQYASISSNRKQVIRYSFKTGKQTAVLFDADKVGNG--LVEEIDGYSI----SPDGK 98

Query: 271 RAL------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           R L         ++      Y  D++S    +L+      I  ++SPD S+I F      
Sbjct: 99  RLLIQTHTEYVYRRSFKAVFYLYDIKSKKLAKLSACENQQI-PTWSPDGSKIAFVY---- 153

Query: 325 KEQLYVMQSNGSDQKRISQDKEAS---YFDPVW 354
              +Y+  ++G  + +++ D + +      P W
Sbjct: 154 NNNIYI--TDGDHETQVTSDGKFNSIINGLPDW 184



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 46/147 (31%), Gaps = 24/147 (16%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV---AY 228
             ++R   +  S  +G     L   D+ G  +                SP+ +++    +
Sbjct: 53  ISSNRKQVIRYSFKTGKQTAVLFDADKVGNGLVEEIDGYS-------ISPDGKRLLIQTH 105

Query: 229 ATYDDEDILRV--YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             Y      +   YL D +  +  K        I  P +S +G +       +    IY 
Sbjct: 106 TEYVYRRSFKAVFYLYDIKSKKLAKLSACENQQI--PTWSPDGSKIAFVYNNN----IYI 159

Query: 287 VDLQSNATERLTNTLF----INISASY 309
            D   +   ++T+       IN    +
Sbjct: 160 TD--GDHETQVTSDGKFNSIINGLPDW 184


>gi|121719107|ref|XP_001276290.1| WD domain protein [Aspergillus clavatus NRRL 1]
 gi|119404488|gb|EAW14864.1| WD domain protein [Aspergillus clavatus NRRL 1]
          Length = 614

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 65/207 (31%), Gaps = 18/207 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  K+            VY+ DT      +++      +    +S +  +  I+  +
Sbjct: 304 FSHDGTKLV----TAGRDRHVYIYDTNTFAVYRQLEKHEDGVAHVSWSPDDTKL-ITCSQ 358

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D+   ++SV+        + +      +A ++ D    V  S   G   L      G   
Sbjct: 359 DKKARVWSVE-TGRCLLTINHHRQPVTAAVWAADGESFVTASLDLGS-HLCHWSMRGDAL 416

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTW 397
              +        D   +P G  +           I V      +E   L   S   +   
Sbjct: 417 --YTWQGGFRVHDCAVTPDGRRLIAADVEE---KIHVYDFATHEEEYCLALKSKPTSVAV 471

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           S   R ++ +  +      ++  IDL+
Sbjct: 472 SKDSRYMLVNLSEG-----QIQLIDLD 493



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 34/273 (12%), Positives = 87/273 (31%), Gaps = 23/273 (8%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI-------YQSITGEKGD 172
             +RL V   L +   + QI    + +S       +  + D          +        
Sbjct: 243 PSNRLAV---LLNNVKQNQINQCLYHNSANPPSLYSDHMCDRSDFPLRTGIELNQHTDEV 299

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +  +       +V+      + + D +   +       +  +    +SP+  K+   + D
Sbjct: 300 WYCQFSHDGTKLVTAGRDRHVYIYDTNTFAVYRQLEKHEDGVAHVSWSPDDTKLITCSQD 359

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +      +      R    I + R  + A  ++++G+   ++   D    +    ++ +
Sbjct: 360 KK----ARVWSVETGRCLLTINHHRQPVTAAVWAADGES-FVTASLDLGSHLCHWSMRGD 414

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           A        F     + +PD  +++  +D E K  +Y   ++  +     + K  S    
Sbjct: 415 ALYTW-QGGFRVHDCAVTPDGRRLI-AADVEEKIHVYDFATHEEEYCLALKSKPTSV--- 469

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             S     +      G    I ++  D ++   
Sbjct: 470 AVSKDSRYMLVNLSEG---QIQLIDLDTTEVVR 499


>gi|323448446|gb|EGB04344.1| hypothetical protein AURANDRAFT_10344 [Aureococcus anophagefferens]
          Length = 688

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 11/151 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATY----DDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           LT       F P FS +  K+A+ T      + D + + L D         +        
Sbjct: 263 LTEGNPGYDFSPAFSKDGSKLAWLTMAGAQYEADAIGIKLYDVATKATTDLVAADADFAY 322

Query: 262 APR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQI 316
           +P+   +S +G +   +        +  VD+ S A E L +     I++    +     +
Sbjct: 323 SPQSLHWSGDGSKIYFTADVRARRRLCVVDVASRAVEILGSAADGSISVHGEIA--GGLL 380

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           V         +LY    +G+  ++++   EA
Sbjct: 381 VSRDSFGAPPELYRCGVDGAGLEQLTFFNEA 411



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 16/143 (11%)

Query: 257 RSMILAPRFSSNGKRALISVQKD-----EAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                +P FS +G +             +A+ I   D+ + AT   T+ +  +   +YSP
Sbjct: 268 PGYDFSPAFSKDGSKLAWLTMAGAQYEADAIGIKLYDVATKAT---TDLVAADADFAYSP 324

Query: 312 -------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
                  D S+I F +D   + +L V+       + +    + S         G L++  
Sbjct: 325 QSLHWSGDGSKIYFTADVRARRRLCVVDVASRAVEILGSAADGSISVHGEIAGGLLVSRD 384

Query: 365 KFSGEKFAIGVMKKDGSQERLLV 387
            F G    +     DG+    L 
Sbjct: 385 SF-GAPPELYRCGVDGAGLEQLT 406



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 17/133 (12%)

Query: 317 VFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--- 372
            + ++R     +Y+  S        +++      F P +S  G  +A+   +G ++    
Sbjct: 242 AWTTNR----HVYLKDSFAAEGAACLTEGNPGYDFSPAFSKDGSKLAWLTMAGAQYEADA 297

Query: 373 --IGVMKKDGSQERLLVEDSNLQAPT-----WSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             I +          LV      A +     WS  G  + F+         +L  +D+  
Sbjct: 298 IGIKLYDVATKATTDLVAADADFAYSPQSLHWSGDGSKIYFTADVRARR--RLCVVDVAS 355

Query: 426 RNETLINTPAYAS 438
           R   ++ + A  S
Sbjct: 356 RAVEILGSAADGS 368



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 22/121 (18%)

Query: 260 ILAPRFSSNGKRALISVQKDEAM------DIYSVDLQSNA---------TERLTNTL--- 301
           +     S +G +A++  +  +         ++ VD+   +            L       
Sbjct: 7   VGGAVVSPDGTQAVLHSKVYDFDAKKFDETLWLVDVAETSGAALAAHAHLTPLVKGSQHS 66

Query: 302 -FINISASYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                S  +SP    + F S+R     K  ++ +   G  +  + +    S  D  W   
Sbjct: 67  FASANSPQWSPCGKFVAFLSNRGKEGEKTSVWTVPVAGPGEATLLKRFPVSVGDLAWEAD 126

Query: 358 G 358
           G
Sbjct: 127 G 127



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 23/121 (19%)

Query: 345 KEASYFDPVWSPQGDLIAFTK----FSGEKFA--IGVMKKDGSQ---------ERLLVED 389
                   V SP G           F  +KF   + ++    +             LV+ 
Sbjct: 3   GMTRVGGAVVSPDGTQAVLHSKVYDFDAKKFDETLWLVDVAETSGAALAAHAHLTPLVKG 62

Query: 390 SNL-----QAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLI--NTPAYASDPQ 441
           S        +P WSP G+ + F   +  +   + ++++ + G  E  +    P    D  
Sbjct: 63  SQHSFASANSPQWSPCGKFVAFLSNRGKEGEKTSVWTVPVAGPGEATLLKRFPVSVGDLA 122

Query: 442 W 442
           W
Sbjct: 123 W 123


>gi|307110811|gb|EFN59046.1| hypothetical protein CHLNCDRAFT_7805 [Chlorella variabilis]
          Length = 439

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 75/207 (36%), Gaps = 17/207 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFRSMILA 262
            +  +    ++  +FS + + +A    D   I+       R     KR  +      I  
Sbjct: 137 QVLLNHSDEVWHLQFSHDGEMLASCGKDQTAIIWDAGGGARGSTVSKRHVLRGHSGPIAF 196

Query: 263 PRFSSNGKRALISVQKDEAMDIYSV-DLQSNA-TERLTNTLFINISASYSPDSSQIVFES 320
             +S +  +     +     D   + D+ S      L +       A++ PD  ++V  S
Sbjct: 197 LCWSPDDSKLATCGEAALGQDALRLWDVASGECLGVLRHHKDPVTCAAWFPDGRRLVTGS 256

Query: 321 DREGKEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                +QL V+  +GS ++  RI + +E      V +  G  I  T        + V   
Sbjct: 257 H---DKQLCVVGLDGSVERQWRIQRIQE-----VVVAKGGRYILATTCER---KVRVYDL 305

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +G  E  + E   L + + S  GR L+
Sbjct: 306 EGDSESYIPEAETLISMSLSRDGRYLL 332



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 64/191 (33%), Gaps = 20/191 (10%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-------ATERLTNTLF 302
            + + N    +   +FS +G+    S  KD+   I+  D               L     
Sbjct: 136 TQVLLNHSDEVWHLQFSHDGEMLA-SCGKDQTAIIW--DAGGGARGSTVSKRHVLRGHSG 192

Query: 303 INISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 +SPD S++    +   G++ L +      +   + +  +       W P G  +
Sbjct: 193 PIAFLCWSPDDSKLATCGEAALGQDALRLWDVASGECLGVLRHHKDPVTCAAWFPDGRRL 252

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                      + V+  DGS ER       +Q    +  GR ++ +         K+   
Sbjct: 253 VTGSHDK---QLCVVGLDGSVERQW-RIQRIQEVVVAKGGRYILATT-----CERKVRVY 303

Query: 422 DLNGRNETLIN 432
           DL G +E+ I 
Sbjct: 304 DLEGDSESYIP 314



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/94 (11%), Positives = 29/94 (30%), Gaps = 3/94 (3%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R++       +    +SP+  K+A           + L D         + + +  +   
Sbjct: 184 RHVLRGHSGPIAFLCWSPDDSKLATCGEAALGQDALRLWDVASGECLGVLRHHKDPVTCA 243

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +  +G+R +          +  V L  +   + 
Sbjct: 244 AWFPDGRRLV---TGSHDKQLCVVGLDGSVERQW 274


>gi|262382062|ref|ZP_06075200.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262297239|gb|EEY85169.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 830

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 88/271 (32%), Gaps = 37/271 (13%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKV 226
            ++G    R+L  ++ +     ++ +   D + G   +      D  + +   S + + +
Sbjct: 303 PKEGTDLIRVLEPADRIPGFRDRSFIWRYDLKTGLYEQLTFGHTDTYIND--ISADSRYL 360

Query: 227 AYATYD------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            ++T D            +Y +D +             +  A  FS +GK+ L++   D 
Sbjct: 361 LFSTSDRVYTSLPHSRNSLYKLDLQTMAIDTIWEKAPYVNQA-AFSPDGKQLLVAGAGD- 418

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
                + D      ++        IS SY  D              QL++          
Sbjct: 419 -----AFDGIGRNIKQ------GQISNSY--DG-------------QLFLYDLASRKASP 452

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           +++D   +  D VW+     I       +   I        + + +    ++        
Sbjct: 453 LTKDFNPNVIDAVWNRFNGQIYILCEDEDYQRIYTCDPANGKIKQVAASEDIIMSYALAD 512

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              ++F   +     ++LY+ DL G    L+
Sbjct: 513 NAPVLFYYGQSASNANRLYAYDLKGGKNRLV 543



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/373 (10%), Positives = 105/373 (28%), Gaps = 65/373 (17%)

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           L +   V G +   G       F ++ V D+      +    P  ++ +   ++ +    
Sbjct: 101 LNSDRYVKGTLDISGPG----AFEVF-VNDKPVGASSELVMEPRRYQVVVKYLTAETDTC 155

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
               K  F S       + ++   + +L            +   +D        SPN + 
Sbjct: 156 PPSLKATFKSEAEAKVVASLNPEKRYTLL----------NILEGKDFQGV--SVSPNGKY 203

Query: 226 -VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +        +               + +    S +   ++     R   +    +  ++
Sbjct: 204 ALVKYVNRFPEGKSESYGQLMDAATGRVLLQDGSFLTTAKWMPKSNRLYYTRTGLDGTEL 263

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----------------- 327
            +VD  +     L   L       ++PD S +++  + EG ++                 
Sbjct: 264 VTVDPATYQQTVLVPNL-PKGRFVFTPDESTLLYTVEEEGPKEGTDLIRVLEPADRIPGF 322

Query: 328 -----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-------AFTKFSGEKFAIGV 375
                ++         ++++     +Y +   S     +        +T     + ++  
Sbjct: 323 RDRSFIWRYDLKTGLYEQLTFGHTDTYIN-DISADSRYLLFSTSDRVYTSLPHSRNSLYK 381

Query: 376 MKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFS---------------RKKDGDTGSKLY 419
           +         +  +   +    +SP G+ L+ +                +       +L+
Sbjct: 382 LDLQTMAIDTIWEKAPYVNQAAFSPDGKQLLVAGAGDAFDGIGRNIKQGQISNSYDGQLF 441

Query: 420 SIDLNGRNETLIN 432
             DL  R  + + 
Sbjct: 442 LYDLASRKASPLT 454


>gi|86359216|ref|YP_471108.1| hypothetical protein RHE_CH03626 [Rhizobium etli CFN 42]
 gi|86283318|gb|ABC92381.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 329

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 89/263 (33%), Gaps = 24/263 (9%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            +D     +      + S++    +  ++     S  V   DG    +     ++ +   
Sbjct: 73  AADGSVSELATAPRKWISQVAAGPQGAIAYSYGKSTLVRLADGTTKEFP---EERTVEGI 129

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P   ++A A Y+      V L    +   P  +  ++       FS +G   + S+Q
Sbjct: 130 AFAPKGLRIAAARYNG-----VSLHWVGMSAKPVDL-EWKGAHTGVTFSPDGNFLVTSMQ 183

Query: 278 KDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ A+  + +D +  A  R   +T       S S+S     +       G     V    
Sbjct: 184 EN-ALHGWKLDSKPGAEARHMRMTGYPAKVKSLSWSVKGKWLA----SSGAPAAIVWPFQ 238

Query: 335 GSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           G D         +            + P  D++A     G   A+ +     +  R   +
Sbjct: 239 GKDGPMGKAPLELGTRANIMATSVKFHPLEDILAIGFVDGMILAVRIADSKEALLRRPGK 298

Query: 389 DSNLQAPTWSPSGRSLIFSRKKD 411
              + A +WS +G+ L F+ +  
Sbjct: 299 -GAITAMSWSANGKLLAFASEAG 320



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 82/248 (33%), Gaps = 29/248 (11%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V    Q     +    ++  ++A   + +  +  T E   F  + L ++ +  +G+    
Sbjct: 92  VAAGPQ-GAIAYSYGKSTLVRLADGTTKEFPEERTVEGIAFAPKGLRIAAARYNGVS--- 147

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK- 251
              +   G + + +            FSP+   +   T   E+ L  + +D++     + 
Sbjct: 148 ---LHWVGMSAKPVDLEWKGAHTGVTFSPDGNFL--VTSMQENALHGWKLDSKPGAEARH 202

Query: 252 -RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-------TERLTNTLFI 303
            R+  + + + +  +S  GK    S     A        Q           E  T    +
Sbjct: 203 MRMTGYPAKVKSLSWSVKGKWLASS----GAPAAIVWPFQGKDGPMGKAPLELGTRANIM 258

Query: 304 NISASYSPDSSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             S  + P    +   F         +  ++   S +  + +  + +     WS  G L+
Sbjct: 259 ATSVKFHPLEDILAIGFV-----DGMILAVRIADSKEALLRRPGKGAITAMSWSANGKLL 313

Query: 362 AFTKFSGE 369
           AF   +G+
Sbjct: 314 AFASEAGD 321


>gi|47826745|dbj|BAD20956.1| dipeptidyl peptidase IV [Prevotella intermedia]
          Length = 731

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 52/154 (33%), Gaps = 24/154 (15%)

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              +  A  S D  +IV  S   GKE   +   N  +  ++ + +         S  G  
Sbjct: 46  KGTSDYAQISADRKKIVTYSFVTGKETGVLFDVNKVNGAKLKEIESY-----EISDDGQF 100

Query: 361 IAFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           I     +   +         +        + L E    Q PT+SP+G+ + F R      
Sbjct: 101 ILIQTGTKRIYRRSFTADFYLYNVKSKSLKKLSEGGPQQIPTFSPNGKYIAFVRS----- 155

Query: 415 GSKLYSIDLNGRNETLINTPAYASD-----PQWV 443
            + ++  D  G  E  I T    ++     P WV
Sbjct: 156 -NNIFVTD--GATEKQITTDGKFNEIINGLPDWV 186



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 44/363 (12%), Positives = 107/363 (29%), Gaps = 48/363 (13%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           G  +L+     +  +     +F L++VK +   + K     P      +    +  Y + 
Sbjct: 98  GQFILIQTGTKRIYRRSFTADFYLYNVKSKS--LKKLSEGGPQQIPTFS---PNGKYIAF 152

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                 F +      +    G     +  +        ++            +  + + +
Sbjct: 153 VRSNNIFVTDGATEKQITTDGKFNEIINGL------PDWVNEEEFGFSNALAWGADSKTL 206

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFS---S----NGKRA---LIS 275
           ++  YD+  + + Y +       P     F++  + P  +S        +  +      S
Sbjct: 207 SWIRYDESKV-KTYSLQMFEGAKPA----FKNYEVYPGDYSYKYPKAGEDNSKVSVHAYS 261

Query: 276 VQKDEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQS 333
           ++       YS+ L       R+ +T F +           +++  +R   E  LY    
Sbjct: 262 LE-SGKTLTYSLPLDADGYIPRIKSTKFAD---------RIVIYTMNRHQDELNLYKANP 311

Query: 334 NGSDQKRISQDKEASYFDPVWSPQ----GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              +   + ++K   Y             D I F         + +   DG   R + + 
Sbjct: 312 TTGECSLLIKEKANKYVKEDAMGGILVMNDYILFPSDRDGYMHLYLYTIDGKFIRQIEKG 371

Query: 390 SNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS---DPQWVG 444
                  +    ++    F          ++Y  D +G+   L     + S      +  
Sbjct: 372 KYDVIEVYGFDEKTGETYFQAAAKTPMQREVYVADKHGKVTCLTTKEGWNSAVFSGDYKY 431

Query: 445 FMD 447
           F++
Sbjct: 432 FLN 434


>gi|15237273|ref|NP_200094.1| WD-40 repeat family protein / notchless protein, putative
           [Arabidopsis thaliana]
 gi|75334042|sp|Q9FLX9|NLE1_ARATH RecName: Full=Notchless protein homolog
 gi|10177096|dbj|BAB10430.1| Notchless protein homolog [Arabidopsis thaliana]
 gi|28416555|gb|AAO42808.1| At5g52820 [Arabidopsis thaliana]
 gi|110742893|dbj|BAE99344.1| Notchless protein homolog [Arabidopsis thaliana]
 gi|332008882|gb|AED96265.1| Notchless protein-like protein [Arabidopsis thaliana]
          Length = 473

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 13/153 (8%)

Query: 182 ESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    ++ + +       +       Q++    FSP+ + +A A++D      V 
Sbjct: 330 ERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDK----SVR 385

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L +    +           +    +S++  R L+S  KD  + I+ +  ++   ++    
Sbjct: 386 LWNGITGQFVTVFRGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEI--RTKKLKQDLPG 442

Query: 301 LFINISAS-YSPDSSQIVFESDREGKEQLYVMQ 332
               + A  +SPD  ++V      GK+++  + 
Sbjct: 443 HADEVFAVDWSPDGEKVV----SGGKDRVLKLW 471



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 48/147 (32%), Gaps = 7/147 (4%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++   +     +RLT    +     +SPD   I   S     + + +  
Sbjct: 332 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASF---DKSVRLWN 388

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                   + +      +   WS    L+  +        I  ++    ++ L      +
Sbjct: 389 GITGQFVTVFRGHVGPVYQVSWSADSRLLL-SGSKDSTLKIWEIRTKKLKQDLPGHADEV 447

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            A  WSP G  ++       D   KL+
Sbjct: 448 FAVDWSPDGEKVV---SGGKDRVLKLW 471



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 15/119 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ +++A  + D      V L D   +         ++ +L   +S +GK  + S  
Sbjct: 116 SFSPDGKQLASGSGDT----TVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLV-SGS 170

Query: 278 KDEAMDIYSVDLQSNATE--RLTNTLFINISASYSP-----DSSQIVFESDREGKEQLY 329
           K   +  +  + +    E   LT         S+ P        + V  S ++G  +++
Sbjct: 171 KSGEICCW--NPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFV-TSSKDGDARIW 226



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 24/177 (13%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLF 302
           ++R  + I      +L   FS +GK+   S   D  + ++  DL +     L        
Sbjct: 98  VNRCSQTIAGHAEAVLCVSFSPDGKQLA-SGSGDTTVRLW--DLYT--ETPLFTCKGHKN 152

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVW------ 354
             ++ ++SPD   +V  S      ++        + +   ++  K+       W      
Sbjct: 153 WVLTVAWSPDGKHLVSGSKSG---EICCWNPKKGELEGSPLTGHKKW-ITGISWEPVHLS 208

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           SP    +  T        I  +    S   L      +    W   G  +I++  +D
Sbjct: 209 SPCRRFV--TSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDG--IIYTGSQD 261


>gi|86132248|ref|ZP_01050843.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
 gi|85817167|gb|EAQ38350.1| conserved hypothetical protein [Dokdonia donghaensis MED134]
          Length = 501

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 85/244 (34%), Gaps = 21/244 (8%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           F+S + ++   K    V   DG N         +            ++ +   +      
Sbjct: 176 FLSVNDLAFSTKYFWQVTVNDGINP----DVNSEFSSFNTIDEPNNRLVFVRKESNGNNV 231

Query: 239 VYLMD--TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           +Y  D  +     P  + +  S    PR ++   +            +++++   +   +
Sbjct: 232 IYSTDDGSETGLGPLALTSQSSNSFRPRRNTEVNKIAFLRTVGGETQLFTMNEDGSDVFQ 291

Query: 297 LTNTLFIN------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +T +  +N      +  ++ P   ++ F S     ++L+ + ++G   + +    + S+ 
Sbjct: 292 VTASQPVNGFNLEEVDFAWEPTGEKLYFPSF----DKLFSINTDGGGLELVYTTPDGSFI 347

Query: 351 DPVWSPQ-GDLIAFTKFSGEKF--AIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRSLI 405
             V   +  D       +   +   I V+  DG+  +  +      L     S +G +++
Sbjct: 348 TEVERARFNDFFVIKTNNVSGYAAEILVLDLDGNLIETAVTGFQGALGGLDISITGSTIV 407

Query: 406 FSRK 409
           F+R 
Sbjct: 408 FTRD 411



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 33/179 (18%)

Query: 267 SNGKRALISVQKDEAMDIYSVDL---QSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            N +   +  + +    IYS D           LT+    +     + + ++I F     
Sbjct: 215 PNNRLVFVRKESNGNNVIYSTDDGSETGLGPLALTSQSSNSFRPRRNTEVNKIAFLRTVG 274

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFD-----PVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           G+ QL+ M  +GSD  +++  +  + F+       W P G+ + F  F      +  +  
Sbjct: 275 GETQLFTMNEDGSDVFQVTASQPVNGFNLEEVDFAWEPTGEKLYFPSFD----KLFSINT 330

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSL------------IFSRKKDGDTGSKLYSIDLNG 425
           DG    L+            P G  +            +          +++  +DL+G
Sbjct: 331 DGGGLELVYTT---------PDGSFITEVERARFNDFFVIKTNNVSGYAAEILVLDLDG 380


>gi|309791884|ref|ZP_07686367.1| serine/threonine protein kinase with WD40 repeats [Oscillochloris
           trichoides DG6]
 gi|308226056|gb|EFO79801.1| serine/threonine protein kinase with WD40 repeats [Oscillochloris
           trichoides DG6]
          Length = 682

 Score = 56.6 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 10/185 (5%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G   +++ V   DG +IR L       +    FS +   +A   +D      VYL +T  
Sbjct: 504 GGWGSAITVCSVDGDSIRVLDTLPSPFVQSICFSADGDLLAAGCFDG----VVYLWNTSD 559

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +   ++  F S I +  FS NG+    S Q    +       +  A E          S
Sbjct: 560 HQPAGQLTGFASFIYSVAFSHNGEYIAASSQTSIRLWRA---AERKAVEIFEGHRNPVRS 616

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPD   +   S+      + + + + S       +  A      + P G ++A    
Sbjct: 617 LAFSPDDQFLASASE---DMTVRLWRMSDSTAAFTPFEHRAGVTSLAYRPDGRMLASGTH 673

Query: 367 SGEKF 371
            G  +
Sbjct: 674 DGRLY 678



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/263 (13%), Positives = 78/263 (29%), Gaps = 20/263 (7%)

Query: 161 DIYQSITGEKGDFNS-RILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           D Y  +   +G  +  R +F +       SG    ++ +   +              +  
Sbjct: 432 DDYTQLHTLRGHGSGIRSVFFAPKNDLLASGSDDETVRIWQTNSGESLRQLRMPGCAVEG 491

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             FSPN + +A   +       + +     D            + +  FS++G     + 
Sbjct: 492 IAFSPNGKLLAVGGWGS----AITVCSVDGDSIRVLDTLPSPFVQSICFSADGDLLA-AG 546

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  + +++         +LT       S ++S +   I   S       + + ++   
Sbjct: 547 CFDGVVYLWNTS-DHQPAGQLTGFASFIYSVAFSHNGEYIAASSQTS----IRLWRAAER 601

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               I +          +SP    +A +        +  M    +        + + +  
Sbjct: 602 KAVEIFEGHRNPVRSLAFSPDDQFLA-SASEDMTVRLWRMSDSTAAFTPFEHRAGVTSLA 660

Query: 397 WSPSGRSLIFSRKKDGDTGSKLY 419
           + P GR L       G    +LY
Sbjct: 661 YRPDGRMLA-----SGTHDGRLY 678



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 78/245 (31%), Gaps = 30/245 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ +   D     +        +    F+P    +A  + D+     V +  T 
Sbjct: 419 AGHDDKTISIWRMDDYTQLHTLRGHGSGIRSVFFAPKNDLLASGSDDE----TVRIWQTN 474

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              + +++      +    FS NGK   +         I    +  ++   L      + 
Sbjct: 475 SGESLRQLRMPGCAVEGIAFSPNGKLLAV---GGWGSAITVCSVDGDSIRVL------DT 525

Query: 306 SASYSPDSSQIVFESDREG------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               SP    I F +D +          +Y+  ++            +  +   +S  G+
Sbjct: 526 LP--SPFVQSICFSADGDLLAAGCFDGVVYLWNTSDHQPAGQLTGFASFIYSVAFSHNGE 583

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSK 417
            IA +  +    +I + +    +   + E       +  +SP  + L  + +   D   +
Sbjct: 584 YIAASSQT----SIRLWRAAERKAVEIFEGHRNPVRSLAFSPDDQFLASASE---DMTVR 636

Query: 418 LYSID 422
           L+ + 
Sbjct: 637 LWRMS 641


>gi|298244659|ref|ZP_06968465.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297552140|gb|EFH86005.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 718

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 67/209 (32%), Gaps = 26/209 (12%)

Query: 220 SPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSM----ILAPRFSSNGKRAL 273
           SP+ + V       D ++   +  +        +       +     +   +S++GK   
Sbjct: 500 SPDGKFVLGMKNVSDQKNASNLGNLLVWDLVTGETQTTHPGLHVLSNVDASWSADGKYIA 559

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQIVFESDREG 324
            +     +     + L    T R  N   +  + S         + P   ++V     EG
Sbjct: 560 TAFSTGGSSGDVDIALFGIMTWRRDNGSDLVSNPSGEHDALHIAWQP-GGRLVATGYIEG 618

Query: 325 KEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIA--FTKFSGEKFAIGVMKKDG 380
              + V       Q+ I Q  +   S     WSP G  +A        + +   V   D 
Sbjct: 619 --HVRVWDGLSGAQQAIFQAGKQGESVLALAWSPDGTRLAASIGSLQAQGYVSAVPVWDI 676

Query: 381 SQERLL----VEDSNLQAPTWSPSGRSLI 405
           ++++LL         ++A  WSP    + 
Sbjct: 677 ARKQLLGSYAKHTDYVRAMAWSPDSTRIA 705



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 64/213 (30%), Gaps = 27/213 (12%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS- 275
           P  SP Q+ +            +      I   P++ G++ ++  A  +S +G+    + 
Sbjct: 370 PTHSPAQKPLP-----PFGTRLLIFNGHDIHNDPQQAGSYNTIT-ALGWSPDGRLIASAD 423

Query: 276 VQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           + +    D     L +   E+L   T   + +     S +  Q          E    + 
Sbjct: 424 LNRVLVWDAGQGKLSAQPREQLGSITRLNWRDNDTLVSVNGQQP------GANESGVRVW 477

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLL 386
              S   + +     +    V SP G  +   K   ++        + V       E   
Sbjct: 478 KAHSGVVQATYHSGGNAIPIVVSPDGKFVLGMKNVSDQKNASNLGNLLVWDLVTG-ETQT 536

Query: 387 VEDSNLQ----APTWSPSGRSLIFSRKKDGDTG 415
                        +WS  G+ +  +    G +G
Sbjct: 537 THPGLHVLSNVDASWSADGKYIATAFSTGGSSG 569



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 52/328 (15%), Positives = 93/328 (28%), Gaps = 52/328 (15%)

Query: 68  VVSKDLQR-----SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
           + S DL R     +             +           +W       LV+    + G +
Sbjct: 419 IASADLNRVLVWDAGQ------GKLSAQPREQLGSITRLNWRD--NDTLVSVNGQQPGAN 470

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
              V  R+W       ++   + S   +               +    G F   +  VS+
Sbjct: 471 ESGV--RVWKAHSG--VVQATYHSGGNA------------IPIVVSPDGKFVLGMKNVSD 514

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPS-RDQILFEPRFSPNQQKVAYATYDDEDILRVY- 240
              +  + N L V D      +   P        +  +S + + +A A         V  
Sbjct: 515 QKNASNLGN-LLVWDLVTGETQTTHPGLHVLSNVDASWSADGKYIATAFSTGGSSGDVDI 573

Query: 241 ----LMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               +M  R D     + N       L   +   G R + +   +  + ++  D  S A 
Sbjct: 574 ALFGIMTWRRDNGSDLVSNPSGEHDALHIAWQPGG-RLVATGYIEGHVRVW--DGLSGAQ 630

Query: 295 ERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--- 348
           + +        S    ++SPD +++   S    + Q YV      D  R       +   
Sbjct: 631 QAIFQAGKQGESVLALAWSPDGTRLA-ASIGSLQAQGYVSAVPVWDIARKQLLGSYAKHT 689

Query: 349 --YFDPVWSPQGDLIAFTKFSGEKFAIG 374
                  WSP    IA     G    I 
Sbjct: 690 DYVRAMAWSPDSTRIA--STDGSVVHIW 715


>gi|271967701|ref|YP_003341897.1| prolyl oligopeptidase [Streptosporangium roseum DSM 43021]
 gi|270510876|gb|ACZ89154.1| Prolyl oligopeptidase [Streptosporangium roseum DSM 43021]
          Length = 666

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 81/247 (32%), Gaps = 30/247 (12%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +  RDG + R    +    +  P +    ++  +          V    T        +
Sbjct: 52  ALAGRDGWHARVSELTGVGTVSPPVW--RGERRFFVRRTARQEHAVLYTATPRQAEQALV 109

Query: 254 ----GNFRSMILAPRF--SSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFIN- 304
                +   +    ++    +G+     + +  DE  ++Y +D+ +    ++ +   I+ 
Sbjct: 110 DPVELDPTGLTTLDQWQPGPDGRLLAYQLSRSGDERSELYVMDVGT---RQIVDGP-IDR 165

Query: 305 --ISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              +  ++ PD     F   R  +  L+ + +   D   I        +    S  G  +
Sbjct: 166 CRYAPVAWLPDGK--AFFYVRSRRVCLHRLGTPAGDDVVI--CGTDRSYGLGISHDGRWL 221

Query: 362 AFTKFSGEKFAIGVMKKDGSQE-----RLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTG 415
             +  +G    + +     S       R++ E ++ + AP   P GR  ++     G   
Sbjct: 222 TVSAAAGGGNDLWLADLAASSPERPALRVIQEGTDAVTAPAVGPDGR--LYLLTTMGAPR 279

Query: 416 SKLYSID 422
            +L   D
Sbjct: 280 GRLCVAD 286



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 40/117 (34%), Gaps = 11/117 (9%)

Query: 311 PDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKF 366
           PD   + ++  R G  + +LYVM       ++I         Y    W P G   AF   
Sbjct: 129 PDGRLLAYQLSRSGDERSELYVMDV---GTRQIVDGPIDRCRYAPVAWLPDGK--AFFYV 183

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +  +  +      + ++           S  GR L  S    G  G+ L+  DL
Sbjct: 184 RSRRVCLHRLGTPAGDDVVICGTDRSYGLGISHDGRWLTVSAAAGG--GNDLWLADL 238



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/243 (11%), Positives = 67/243 (27%), Gaps = 18/243 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRALI 274
            S + + +   +        ++L D       +     I      + AP    +G+  L+
Sbjct: 214 ISHDGRWLT-VSAAAGGGNDLWLADLAASSPERPALRVIQEGTDAVTAPAVGPDGRLYLL 272

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS----SQIVFESDREGKEQLYV 330
           +        +   D      E   + +  +  A     +    S ++    R    ++ V
Sbjct: 273 TTMGAPRGRLCVADPARPEPEHWLDLVGPDPEAVIGDFAILGDSVLLVGWTRHAVSEISV 332

Query: 331 MQSNGSDQ-KRISQDKEASYFDPVWSP-QGDLIAFTKFSG-EKFAIGVMKKDGSQERLL- 386
              +G +   R+      S       P  G  + FT        ++        +  L  
Sbjct: 333 HDLDGGEPLGRVPLPGLGSAGRMSVRPGDGHEVWFTYTDSVTPGSVHRYDARTGRTTLWA 392

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS---DPQWV 443
                 + P  S   R +++           + +    G   T++           P + 
Sbjct: 393 AAPGAAEVPELSA--RRIVYPSADGTPVRMVVLARPGTGPRPTILYGYGGFGLSLTPSYS 450

Query: 444 GFM 446
            ++
Sbjct: 451 SYI 453



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 19/142 (13%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQS------NGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +  D S     S    +++L+   +      +G   +        +   PVW  +G+  
Sbjct: 25  RWLEDPSSPATRSWLAAQDELWRGHAAALAGRDGWHARVSELTGVGTVSPPVW--RGERR 82

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------W--SPSGRSLIFSRKKDG 412
            F + +  +    +      Q    + D     PT       W   P GR L +   + G
Sbjct: 83  FFVRRTARQEHAVLYTATPRQAEQALVDPVELDPTGLTTLDQWQPGPDGRLLAYQLSRSG 142

Query: 413 DTGSKLYSIDLNGRNETLINTP 434
           D  S+LY +D+  R   +++ P
Sbjct: 143 DERSELYVMDVGTR--QIVDGP 162


>gi|312140351|ref|YP_004007687.1| serine peptidase [Rhodococcus equi 103S]
 gi|311889690|emb|CBH49007.1| putative serine peptidase [Rhodococcus equi 103S]
          Length = 679

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 63/186 (33%), Gaps = 14/186 (7%)

Query: 265 FSSNGKRALISVQKDE-----AMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVF 318
            + +G   + +             +  +D  +     + +    ++S    SPD+S +V+
Sbjct: 219 LAPDGSFVVSTWSLPGVLGSMRTVLVRIDAATGERTTIVDDDGADLSRPVISPDASSVVY 278

Query: 319 ESDREG----KEQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFA 372
             +  G      ++ + + +  D + +        +    VW P    +  T     +  
Sbjct: 279 LRESYGDAEQAPRITLHRFDFEDARVVDLASGWDRWPTSAVWLPDSAGVLLTADERGRGP 338

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF--SRKKDGDTGSKLYSIDLNGRNETL 430
           + V++ DG+   L  +D+       +P G ++    +         ++     +    T 
Sbjct: 339 VFVLRGDGTPAPLTTDDAAYSDLQVAPDGSAVYALRASYARPPHPVRIALAGADAGTVTE 398

Query: 431 INTPAY 436
           +  P+ 
Sbjct: 399 LRAPSE 404



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 67/211 (31%), Gaps = 45/211 (21%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V G ++  L  +D        +       L  P  SP+   V Y      D  +     
Sbjct: 234 GVLGSMRTVLVRIDAATGERTTIVDDDGADLSRPVISPDASSVVYLRESYGDAEQ----- 288

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                             APR         I++ + +  D   VDL S            
Sbjct: 289 ------------------APR---------ITLHRFDFEDARVVDLASGWDR-------W 314

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-- 361
             SA + PDS+ ++  +D  G+  ++V++ +G+     + D  A+Y D   +P G  +  
Sbjct: 315 PTSAVWLPDSAGVLLTADERGRGPVFVLRGDGTPAPLTTDD--AAYSDLQVAPDGSAVYA 372

Query: 362 --AFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             A          I +   D      L   S
Sbjct: 373 LRASYARPPHPVRIALAGADAGTVTELRAPS 403



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 39/97 (40%), Gaps = 15/97 (15%)

Query: 265 FSSNGKRALISVQKDEAMD------IYSVDLQS-NATERLTNTLFINISASYSPDSSQIV 317
            S +G R +IS    +A +      ++ +D     +  R+T  +     A+++     ++
Sbjct: 30  LSPDGSRLVISQAVLDADETKYVSALWEIDPAGDRSARRITWGVEGEGGAAFTSTGD-LL 88

Query: 318 FESDR-------EGKEQLYVMQSNGSDQKRISQDKEA 347
           F + R       +    L+ + ++G +  R++     
Sbjct: 89  FTASRPVPGAADDAPNGLWRLPADGGEASRVACRGGG 125


>gi|288916410|ref|ZP_06410788.1| conserved hypothetical protein [Frankia sp. EUN1f]
 gi|288352181|gb|EFC86380.1| conserved hypothetical protein [Frankia sp. EUN1f]
          Length = 665

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 53/152 (34%), Gaps = 12/152 (7%)

Query: 265 FSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           FS++GK        ++   +D+++ DL +    RLT+          SPD +  V    R
Sbjct: 318 FSADGKEVTYIGYPEESSNIDVFAADLTTGKVRRLTSNPEYVDPIDLSPDGNWTVAMDTR 377

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL----IAFTKFSG-EKFAIGVMK 377
               Q+++      D   I+     S      +         I   ++     +    + 
Sbjct: 378 GSDRQMFLAAM--RDVPPITDMVTTSATSSTRNNGMRRFFQPILIDRYGDRGDYQGQRVN 435

Query: 378 KDGSQERLLVEDSNLQA---PTWSPSGRSLIF 406
             G      V D N      P WSP G ++++
Sbjct: 436 AAGDGSPGSVNDPNWNGMADPRWSPDGTAIVY 467



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 63/195 (32%), Gaps = 13/195 (6%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDI 236
           +   +V           M  D ++   L   RD +       FS + ++V Y  Y +E  
Sbjct: 276 YDVVNVTRLFDPTDTQPMSVDASDPATLVYDRDALSVGELRGFSADGKEVTYIGYPEESS 335

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
                         +R+ +    +     S +G   +    +     ++   +       
Sbjct: 336 NIDVFAADLTTGKVRRLTSNPEYVDPIDLSPDGNWTVAMDTRGSDRQMFLAAM--RDVPP 393

Query: 297 LTNTLFINISASYSPDSSQIVFE-------SDREGKEQLYVMQSNGSDQKRISQDKEAS- 348
           +T+ +  + ++S   +  +  F+        DR G  Q   + + G        D   + 
Sbjct: 394 ITDMVTTSATSSTRNNGMRRFFQPILIDRYGDR-GDYQGQRVNAAGDGSPGSVNDPNWNG 452

Query: 349 YFDPVWSPQGDLIAF 363
             DP WSP G  I +
Sbjct: 453 MADPRWSPDGTAIVY 467



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 33/96 (34%), Gaps = 5/96 (5%)

Query: 331 MQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGV--MKKDGSQERLL 386
           M  + SD   +  D++A     +  +S  G  + +  +  E   I V        + R L
Sbjct: 293 MSVDASDPATLVYDRDALSVGELRGFSADGKEVTYIGYPEESSNIDVFAADLTTGKVRRL 352

Query: 387 VEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +     P   SP G   +    +  D    L ++
Sbjct: 353 TSNPEYVDPIDLSPDGNWTVAMDTRGSDRQMFLAAM 388


>gi|288916812|ref|ZP_06411186.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EUN1f]
 gi|288351886|gb|EFC86089.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EUN1f]
          Length = 876

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 62/344 (18%), Positives = 114/344 (33%), Gaps = 53/344 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GRV+  G D   +E  LWD+ DR   +     S           + D +Y       GD 
Sbjct: 544 GRVLAAGTDAGTIE--LWDLADRSVPVHAGTIS----------RVGDWVYSVAFSPGGDL 591

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRY---LTPSRDQILFEPRFSPNQQKVAYAT 230
            +  +        G     L  +  D A       +T  RD++     F+P+ + +A   
Sbjct: 592 LAAGV--------GDGDIRLWDV-ADPARPASRASITFHRDRVRSV-AFAPSGEILA--- 638

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMI---LAPRFSSNGKRALISVQKDEAMDIYSV 287
               D  ++ L D      P R            +  FS  G         D  + ++ V
Sbjct: 639 -SGGDDGQIALWDVTDPSDPLRRWAADGATAGIRSVAFSPRGGLLAFGGD-DGTVRLWDV 696

Query: 288 DLQSNATERLT-----NTLFINISA-------SYSPDSSQIVFESDREGKEQLYVMQSNG 335
              +  +   T          +  A       ++SPD S +      +G   L+ +++ G
Sbjct: 697 ADPTRPSVSATLRGGSGGAGSDTGAGRTVQSVAFSPDGSALA-AGGLDGSVHLWALRATG 755

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +     +           +SP G L+  +    +   +  +    S   L     + +A 
Sbjct: 756 TADLGSTPGGLGGVTSVGFSPDGGLLI-SASEDDTVRLTDVSVPASPVPLTDLRGHAKAV 814

Query: 396 T---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
               + P  R+++      GDT ++L++ID     +     PA 
Sbjct: 815 NAALFLPDARTVV---SVSGDTSARLWTIDPEALAQRACTDPAN 855


>gi|241688819|ref|XP_002412863.1| WD-repeat protein, putative [Ixodes scapularis]
 gi|215506665|gb|EEC16159.1| WD-repeat protein, putative [Ixodes scapularis]
          Length = 318

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 15/167 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +SG +  SL + D    N + +     + +    F P    + +A   + +++++
Sbjct: 118 VDDTFLSGSLDKSLRLWDLRSPNCQGVMHLTGRPVGN--FDPEG--LIFAVGLNSELVKL 173

Query: 240 Y---LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           Y     D       K   +        +FS +GK  LIS        I+ +D      ++
Sbjct: 174 YDLRTFDKGPFNTFKLPQDKECDWTGLKFSPDGKSILISTN---GAVIHLIDAFQGTPQQ 230

Query: 297 ----LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                TN   + + AS+SPD SQ VF    +G+  ++         +
Sbjct: 231 SLTGHTNNKGVPLEASFSPD-SQFVFSGSTDGRVHVWSTAEGVGGLR 276



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 55/170 (32%), Gaps = 30/170 (17%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS-RILF 179
              L    RLWD++                           +        G+F+   ++F
Sbjct: 124 SGSLDKSLRLWDLRSPN---------------------CQGVMHLTGRPVGNFDPEGLIF 162

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                   +    L   D+   N   L   ++      +FSP+ + +  +T    +   +
Sbjct: 163 AVGLNSELVKLYDLRTFDKGPFNTFKLPQDKECDWTGLKFSPDGKSILIST----NGAVI 218

Query: 240 YLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           +L+D       + +    N + + L   FS +  + + S   D  + ++S
Sbjct: 219 HLIDAFQGTPQQSLTGHTNNKGVPLEASFSPD-SQFVFSGSTDGRVHVWS 267



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 11/113 (9%)

Query: 308 SYSPDSSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           ++ P+         S+      L        +  ++ QDKE  +    +SP G  I  + 
Sbjct: 154 NFDPEGLIFAVGLNSELVKLYDLRTFDKGPFNTFKLPQDKECDWTGLKFSPDGKSILIST 213

Query: 366 FSGEKFAIGVMKK-DGSQERLLV-EDSNLQAP---TWSPSGRSLIFSRKKDGD 413
                  I ++    G+ ++ L    +N   P   ++SP  + + FS   DG 
Sbjct: 214 ---NGAVIHLIDAFQGTPQQSLTGHTNNKGVPLEASFSPDSQFV-FSGSTDGR 262


>gi|284034366|ref|YP_003384297.1| prolyl oligopeptidase [Kribbella flavida DSM 17836]
 gi|283813659|gb|ADB35498.1| Prolyl oligopeptidase [Kribbella flavida DSM 17836]
          Length = 657

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 69/197 (35%), Gaps = 17/197 (8%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN---ATERLTNTLFIN 304
           R   R  +    +  P +  +       ++++   D   + +         +L +   + 
Sbjct: 60  RNRVRALSAVGSVSTPVWRGD---RCFVLRREPRQDHPVLMVDDTVLLDPVQL-DPSGLT 115

Query: 305 ISASY--SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLI 361
              S+  SPD S++ F+  R G E+  +   + +  + +    +   + P  W P G   
Sbjct: 116 TLDSWQPSPDGSRLAFQVSRGGDERSVLHVLDVATGEVVDGPIDGCRYSPIAWLPDGKSF 175

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + +       + +     + ++ +  D        S  GR L  S  +    G+ L+  
Sbjct: 176 YYVRLR----RVLLHHIGSADDQQVFTDEASYGLDLSADGRWLAVSAARG--RGNDLWLA 229

Query: 422 DL-NGRNETLINTPAYA 437
           DL N     ++   A A
Sbjct: 230 DLGNDAPPQVLQAGADA 246



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 82/277 (29%), Gaps = 40/277 (14%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDD 233
           SR+ F       G  ++ L V+D   A    +    D   + P  + P+ +   Y     
Sbjct: 127 SRLAFQVSRG--GDERSVLHVLDV--ATGEVVDGPIDGCRYSPIAWLPDGKSFYYVRLR- 181

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               RV L         +   +  S  L    S++G+   +S  +    D++  DL    
Sbjct: 182 ----RVLLHHIGSADDQQVFTDEASYGL--DLSADGRWLAVSAARGRGNDLWLADL---- 231

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDP 352
                     +         +  V      G  +LYV+ +  +   RI   D E      
Sbjct: 232 --------GNDAPPQVLQAGADAVTVVSVGGDGRLYVVTTKDAPTGRICIGDPENPLIWH 283

Query: 353 VW---SPQG---------DLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTW 397
            +    P            ++   +       I V          E  L    ++ + T 
Sbjct: 284 DYVAADPDAPLSSLAVLDKVVLVGRSRAGIGEIIVHDLVTGRRLGEIPLPGKGSVGSLTT 343

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            P G    +    D  T + +Y  D      +L + P
Sbjct: 344 RPEGGHQAWFSYTDSVTPAAVYCYDATTGETSLWSEP 380



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 46/162 (28%), Gaps = 9/162 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALIS-VQ 277
           SP+  ++A+      D   V L    +       G       +P  +  +GK      ++
Sbjct: 123 SPDGSRLAFQVSRGGDERSV-LHVLDVATGEVVDGPIDGCRYSPIAWLPDGKSFYYVRLR 181

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +     I S D      +  T+     +    S D   +   + R     L++       
Sbjct: 182 RVLLHHIGSAD----DQQVFTDEASYGLD--LSADGRWLAVSAARGRGNDLWLADLGNDA 235

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             ++ Q    +         G L   T        I +   +
Sbjct: 236 PPQVLQAGADAVTVVSVGGDGRLYVVTTKDAPTGRICIGDPE 277



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 32/103 (31%), Gaps = 7/103 (6%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSNLQAPTW--SPSGR 402
            S   PVW  +GD     +    +    +M  D        L         +W  SP G 
Sbjct: 70  GSVSTPVW--RGDRCFVLRREPRQDHPVLMVDDTVLLDPVQLDPSGLTTLDSWQPSPDGS 127

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
            L F   + GD  S L+ +D+                P  W+ 
Sbjct: 128 RLAFQVSRGGDERSVLHVLDVATGEVVDGPIDGCRYSPIAWLP 170


>gi|332883129|gb|EGK03412.1| hypothetical protein HMPREF9456_01479 [Dysgonomonas mossii DSM
           22836]
          Length = 717

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/261 (12%), Positives = 92/261 (35%), Gaps = 49/261 (18%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAP---------------------------- 250
           FS + + +A+  +D+ ++ +  +     +  P                            
Sbjct: 200 FSEDGRLLAFVRFDETNVPQYSMQMYENNLYPTSFSFKYPKAGEQNSKVTCNVFDIDSKT 259

Query: 251 -KRIGNFRSMILAPR--FSSNGKRAL-ISVQKDEA-MDIYSVDLQSNATERLT---NTLF 302
            +++    ++   PR  F   G     +++ +++   D++  + +S+    +    N+ +
Sbjct: 260 IRKMNIPDNVEYIPRIQFLPTGDDLAIMTLNREQNKFDLFLANARSSVCRSILHEENSRY 319

Query: 303 INISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           I+         +    +Q V+ S+++G   +Y+   NG+ QK+++             P 
Sbjct: 320 IDSELLNYIYFF---GNQFVYVSEKDGYSHIYLYDKNGAQQKKLTSGNYDVTSLLAVDPV 376

Query: 358 GDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
              + +        + AI  +      +  L         T+S +G+   +       + 
Sbjct: 377 SKTVFYEAAEDSPLQRAIYKVDMVKGIKTKLSTKQGTNGATFSKNGKY--YINSYTNIST 434

Query: 416 SKLYSI-DLNGRNETLINTPA 435
            ++ ++ D  G+   ++   A
Sbjct: 435 PRIVTVHDATGKELRVLEDNA 455



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/287 (12%), Positives = 85/287 (29%), Gaps = 57/287 (19%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N+        +    P FS + + +AY    + +I  V        +  K     + +  
Sbjct: 125 NLVRKLTENKEKQSIPTFSKDGRMLAYV--INNNIWLVKFDYDTESQITKDGALGKIING 182

Query: 262 APRF--------------SSNGKRALISVQKDEAMDIYSV-------------------- 287
              +              S +G+        +  +  YS+                    
Sbjct: 183 GTDWVYEEEFATTSIMDFSEDGRLLAFVRFDETNVPQYSMQMYENNLYPTSFSFKYPKAG 242

Query: 288 -----------DLQSNATERLTNTLFINISAS--YSPDSSQIV-FESDRE-GKEQLYVMQ 332
                      D+ S    ++     +       + P    +     +RE  K  L++  
Sbjct: 243 EQNSKVTCNVFDIDSKTIRKMNIPDNVEYIPRIQFLPTGDDLAIMTLNREQNKFDLFLAN 302

Query: 333 SNGSDQKRISQDKEASYFDP----VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +  S  + I  ++ + Y D          G+   +         I +  K+G+Q++ L  
Sbjct: 303 ARSSVCRSILHEENSRYIDSELLNYIYFFGNQFVYVSEKDGYSHIYLYDKNGAQQKKLTS 362

Query: 389 DSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            +       +     +++ +   +D      +Y +D+    +T ++T
Sbjct: 363 GNYDVTSLLAVDPVSKTVFYEAAEDSPLQRAIYKVDMVKGIKTKLST 409



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 84/282 (29%), Gaps = 70/282 (24%)

Query: 219 FSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            SP+++++         Y        Y  D R +   +++   +     P FS +G+   
Sbjct: 92  ISPDEKRLVVYNDYEPIYRHSFKANYYYYDIRRN-LVRKLTENKEKQSIPTFSKDGRMLA 150

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLF----INISASY--------------SPDSSQ 315
             +  +    I+ V    +   ++T        IN    +              S D   
Sbjct: 151 YVINNN----IWLVKFDYDTESQITKDGALGKIINGGTDWVYEEEFATTSIMDFSEDGRL 206

Query: 316 IVFES-DREGKEQ------------------------------LYVMQSNGSDQKRISQD 344
           + F   D     Q                                V   +    ++++  
Sbjct: 207 LAFVRFDETNVPQYSMQMYENNLYPTSFSFKYPKAGEQNSKVTCNVFDIDSKTIRKMNIP 266

Query: 345 KEASYFDPV-WSPQGD--LIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPS 400
               Y   + + P GD   I        KF + +     S  R +L E+++    +   +
Sbjct: 267 DNVEYIPRIQFLPTGDDLAIMTLNREQNKFDLFLANARSSVCRSILHEENSRYIDSELLN 326

Query: 401 -----GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                G   ++  +KDG   S +Y  D NG  +  + +  Y 
Sbjct: 327 YIYFFGNQFVYVSEKDG--YSHIYLYDKNGAQQKKLTSGNYD 366



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 51/177 (28%), Gaps = 25/177 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           A   +    A  +  +D+ S             +    S    +  F++D +    +   
Sbjct: 10  ACFVLTTASAQRLDLMDINSGK------YSARGVQPVVSSADGESYFQADNKNTMIIKYS 63

Query: 332 QSNGSDQKRISQDKEA------SYFDPVWSPQGDLIAF------TKFSGEKFAIGVMKKD 379
              G     +    +A      S+   + SP    +              K         
Sbjct: 64  YKTGLPTDTLFNVNKARECTFSSFQGFIISPDEKRLVVYNDYEPIYRHSFKANYYYYDIR 123

Query: 380 GSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +  R L E+   Q+ PT+S  GR L +         + ++ +  +   E+ I    
Sbjct: 124 RNLVRKLTENKEKQSIPTFSKDGRMLAYV------INNNIWLVKFDYDTESQITKDG 174


>gi|332848152|ref|XP_511347.3| PREDICTED: WD repeat and SOCS box-containing protein 1 isoform 5
           [Pan troglodytes]
          Length = 275

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 61/178 (34%), Gaps = 28/178 (15%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            F+ +G   L+S  +D+ + ++ +    N  + L        S ++SPDSS +       
Sbjct: 31  TFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSILC---SVG 87

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + +++   +     R  +          +SP G L+A   +      + +        
Sbjct: 88  ASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSPDGALLATASYDT---RVYIWDPHNGD- 143

Query: 384 RLLVEDSNLQAP-----------------TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +L+E  +L  P                 ++S  G  +        D   + + ID +
Sbjct: 144 -ILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVA---SLADDKMVRFWRIDED 197



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 65/202 (32%), Gaps = 27/202 (13%)

Query: 185 VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VS     +L V D +D  N+  +       ++   FSP+   +            V+L +
Sbjct: 41  VSASRDKTLRVWDLKDDGNMMKVLRGHQNWVYSCAFSPDSSILCSV----GASKAVFLWN 96

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---------- 293
                  +++      ++A  FS +G     +   D  + I+  D  +            
Sbjct: 97  MDKYTMIRKLEGHHHDVVACDFSPDGALLA-TASYDTRVYIW--DPHNGDILMEFGHLFP 153

Query: 294 -TERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
               +      +    S S+S D   +   +D +   + + +  +     +++       
Sbjct: 154 PPTPIFAGGANDRWVRSVSFSHDGLHVASLAD-DKMVRFWRIDEDY--PVQVAPLSNG-- 208

Query: 350 FDPVWSPQGDLIAFTKFSGEKF 371
               +S  G ++A     G  +
Sbjct: 209 LCCAFSTDGSVLAAGTHDGSVY 230


>gi|327352806|gb|EGE81663.1| dipeptidyl-peptidase V [Ajellomyces dermatitidis ATCC 18188]
          Length = 729

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 69/205 (33%), Gaps = 34/205 (16%)

Query: 265 FSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTL----------FINISA 307
            S +GK      +  E          I+ V    ++     N              + S 
Sbjct: 238 LSPDGKTVAFMSKAPELPKANLTTSYIFIVPHDGSSVAIPINGPESSAAADGIVGASSSP 297

Query: 308 SYSPDSSQIVF--------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            +SPDS +I +        ESDR     +Y+   +G     ++   + S     W+P G 
Sbjct: 298 VFSPDSKKIAYLQMEERNYESDR---RIVYIATLDGGRIVSLASKWDRSPDSLKWTPDGK 354

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            +  +     +  +  +  D   + +     +   ++A  +     S++ +        +
Sbjct: 355 TLYMSVEDRARGRLFTLPTDAGADYVPENFTDHGIVRAYHFLKDSTSVLTTATT--LWSN 412

Query: 417 KLYSIDLNGRNETLINTPAYASDPQ 441
            +Y+I  +  NE  +   A   DP+
Sbjct: 413 AIYTI-ASPDNEPKVLFSANEHDPE 436



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 76/206 (36%), Gaps = 17/206 (8%)

Query: 191 NSLCVMDRDGANIRYLTPSRD---------QILFEPRFSPNQQKVAYATYDDE----DIL 237
           + + ++  DG+++       +              P FSP+ +K+AY   ++     D  
Sbjct: 262 SYIFIVPHDGSSVAIPINGPESSAAADGIVGASSSPVFSPDSKKIAYLQMEERNYESDRR 321

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---T 294
            VY+      R       +     + +++ +GK   +SV+      ++++   + A    
Sbjct: 322 IVYIATLDGGRIVSLASKWDRSPDSLKWTPDGKTLYMSVEDRARGRLFTLPTDAGADYVP 381

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           E  T+   I  +  +  DS+ ++  +       +Y + S  ++ K +    E        
Sbjct: 382 ENFTDH-GIVRAYHFLKDSTSVLTTATTLWSNAIYTIASPDNEPKVLFSANEHDPELKGL 440

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDG 380
            P+     +   +  K    ++K +G
Sbjct: 441 GPEDIDEFYYDGNWTKVHAWIVKPEG 466


>gi|326434227|gb|EGD79797.1| hypothetical protein, variant [Salpingoeca sp. ATCC 50818]
          Length = 513

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 69/205 (33%), Gaps = 16/205 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    D+      +SP+   VA  + D      + +  T   +      +    + +  
Sbjct: 104 RIETGHDESCRSCSWSPDGTMVASGSDDR----SLRVWSTDAGQKITVFRDHDDWVNSIA 159

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI---VFESD 321
           +S +  + + S   D  + ++SV  +      L        + ++S D   I    FE D
Sbjct: 160 WSPDSGKIV-SGCGDGVVRVWSV-REDRLLFELKGHKDWVEAVAWSSDGMHIASGAFERD 217

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 + +  +    Q    +  E       + P GD +  +  +     +  +   G 
Sbjct: 218 ----PTIIIWDAVKGAQLFTCRGHEDRLLSLDFHPDGDALV-SGAADNTARVWRVS-SGD 271

Query: 382 QERLL-VEDSNLQAPTWSPSGRSLI 405
           QER+L    S + A  +  +G  + 
Sbjct: 272 QERVLATMTSCVNAVRFCHTGVMVA 296



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 69/228 (30%), Gaps = 20/228 (8%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG    SL V   D      +    D  +    +SP+  K+     D      V +  
Sbjct: 125 VASGSDDRSLRVWSTDAGQKITVFRDHDDWVNSIAWSPDSGKIVSGCGDG----VVRVWS 180

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R DR    +   +  + A  +SS+G     S   +    I   D    A  +L      
Sbjct: 181 VREDRLLFELKGHKDWVEAVAWSSDGMHIA-SGAFERDPTIIIWDAVKGA--QLFTCRGH 237

Query: 304 NI---SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S  + PD   +V            V + +  DQ+R+     +      +   G +
Sbjct: 238 EDRLLSLDFHPDGDALV---SGAADNTARVWRVSSGDQERVLATMTSCVNAVRFCHTGVM 294

Query: 361 IAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLI 405
           +A     G    F        G +      D +      WSP    ++
Sbjct: 295 VAVGCSDGSVSVFEFF----SGDKLFYFQHDKHWIYCLAWSPMDTHIV 338



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 13/106 (12%)

Query: 326 EQLYVMQS-----NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            Q+    +     +   Q RI    + S     WSP G ++A      +  ++ V   D 
Sbjct: 85  PQVRTWDASAYMTDELRQSRIETGHDESCRSCSWSPDGTMVA---SGSDDRSLRVWSTDA 141

Query: 381 SQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            Q+  +  D +    +  WSP    ++      GD   +++S+  +
Sbjct: 142 GQKITVFRDHDDWVNSIAWSPDSGKIV---SGCGDGVVRVWSVRED 184


>gi|298387250|ref|ZP_06996803.1| Xaa-Pro dipeptidyl-peptidase [Bacteroides sp. 1_1_14]
 gi|298259919|gb|EFI02790.1| Xaa-Pro dipeptidyl-peptidase [Bacteroides sp. 1_1_14]
          Length = 744

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 76/246 (30%), Gaps = 50/246 (20%)

Query: 210 RDQILFEPRFSPNQQKVA----------YATYDDE------------------------D 235
            +      R+SP+ +KVA          Y  Y +                          
Sbjct: 199 GNYYSAYIRWSPDSKKVASCKIRPVEKRYVYYVESSPSDQLQPKLHKQEYAKPGDELPFK 258

Query: 236 ILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSN 292
           I  +Y ++T     P   + + +  I AP ++S+ +       +        +     + 
Sbjct: 259 IPCIYDVETGHSVIPSTDLFSQQYYITAPEWNSDSQAITFEYNQRGHQVYRVLEFSAATG 318

Query: 293 ATERL---TNTLFINISASYSPD---SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
               L   T+  ++N S  +  D     ++++ S+R+    LY+     +   R     E
Sbjct: 319 KVRPLIEETSDKYVNYSRRFRHDLQDGKRMIWMSERDNWNHLYMYDRTTAQPIRQITKGE 378

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
               D +   + + + +   +G +            +  DG     L     +    +S 
Sbjct: 379 WYVRDILRVDETNQLIYFSANGVQAKEDPYLIRYYRIGFDGKNLTCLTPAEGMHNAWFSK 438

Query: 400 SGRSLI 405
             + L+
Sbjct: 439 DMQYLV 444



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/353 (13%), Positives = 102/353 (28%), Gaps = 86/353 (24%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           ++ ++ S    +    +   +   +   G I     ++D D  N + L   +        
Sbjct: 37  ANKVFYSNVNPEWIGKTHYFWYVRNTPDGRI---YVLVDADTQNRKDLFDHKLVAAALSE 93

Query: 219 FSPNQQKVAYAT----------------YDDEDILRVYLMDTRIDRAPKRIGNFRSM--- 259
            S   +K+   +                +   +   VY++D         +   R     
Sbjct: 94  AS--GRKIEATSLYLDRLSVNNGLDTLRFVFNNHRWVYVIDKNQLTDEGALPTPRKQRHW 151

Query: 260 -------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISAS 308
                    AP  S + K         +  +IY  +  +   ++L    T   + +    
Sbjct: 152 METDDEKTAAPVTSPDKKYTAFI----KNHNIYVKETATGKEKQLSLDGTLGNYYSAYIR 207

Query: 309 YSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRI-------------------------- 341
           +SPDS ++     R   K  +Y ++S+ SDQ +                           
Sbjct: 208 WSPDSKKVASCKIRPVEKRYVYYVESSPSDQLQPKLHKQEYAKPGDELPFKIPCIYDVET 267

Query: 342 ---------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLLVEDS 390
                       ++     P W+     I F           V+       + R L+E++
Sbjct: 268 GHSVIPSTDLFSQQYYITAPEWNSDSQAITFEYNQRGHQVYRVLEFSAATGKVRPLIEET 327

Query: 391 NLQAPTWSP-------SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           + +   +S         G+ +I+  ++D    + LY  D          T   
Sbjct: 328 SDKYVNYSRRFRHDLQDGKRMIWMSERDN--WNHLYMYDRTTAQPIRQITKGE 378


>gi|295136409|ref|YP_003587085.1| peptidase S9B dipeptidylpeptidase IV subunit [Zunongwangia profunda
           SM-A87]
 gi|294984424|gb|ADF54889.1| peptidase S9B dipeptidylpeptidase IV subunit [Zunongwangia profunda
           SM-A87]
          Length = 730

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 89/270 (32%), Gaps = 63/270 (23%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRID------------------RAPKRIGNFRSMI 260
           +SP+ +K+A    D   +  +YL++T++                   +  + I +     
Sbjct: 172 WSPDSKKIATFRQDQRHVSDMYLVETKVGEPELQEWKYPIPQDSAIIKIERLIIDTEDNK 231

Query: 261 LA----PR---------------------FSSNGKRALI-SVQKDEA-MDIYSVDLQSNA 293
           +     P                      ++ + +     SV +D   + +   ++++  
Sbjct: 232 ITKLNIPADARRGTLCDDIACDGTFGDNEWAPDSETLAFASVSRDHKKVTLRVANVETGE 291

Query: 294 TERL------TNTLFINISASYS--PDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQD 344
              +      T       S ++   P+S +I++ S+R+    LY+      + K +I++ 
Sbjct: 292 VRDIFTEETDTQFESGQGSINWHYLPESDEIIWYSERDDWGHLYLYDLETGELKNQITKG 351

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                          ++ F     E+           +K +G   +LL  ++   + + S
Sbjct: 352 DFVVTSLTKVDEDKKMLYFYAQGKEEGRDPYFRHFYSIKFNGKGLKLLTPENGTHSVSLS 411

Query: 399 PSGRSLIFSRKKDGDTGSKLYSI-DLNGRN 427
           P  +   F           +  + D+ GR 
Sbjct: 412 PDNKY--FVDNYSQPNVPNVAVLRDIKGRK 439



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 30/133 (22%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQ-------SNATERLTNTLFINISASY--- 309
            ++P + ++       +Q +       VD +       ++  E L          S+   
Sbjct: 58  NVSPNWLAD-DSFWYEIQINGERQYVLVDPKKKSKRTSTSLEELLGKKPKEEQRGSWTEV 116

Query: 310 -SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--------------W 354
            SPD S++V+  D      L++  +    + +++QD E +Y                  W
Sbjct: 117 ASPDGSKVVYIKD----WNLWMRDTQTGKETQLTQDGEKNYGYATDNAGWKHSDKPIVLW 172

Query: 355 SPQGDLIAFTKFS 367
           SP    IA  +  
Sbjct: 173 SPDSKKIATFRQD 185


>gi|239612037|gb|EEQ89024.1| dipeptidyl-peptidase V [Ajellomyces dermatitidis ER-3]
          Length = 730

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 69/205 (33%), Gaps = 34/205 (16%)

Query: 265 FSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTL----------FINISA 307
            S +GK      +  E          I+ V    ++     N              + S 
Sbjct: 238 LSPDGKTVAFMSKAPELPKANLTTSYIFIVPHDGSSVAIPINGPESSAAADGIVGASSSP 297

Query: 308 SYSPDSSQIVF--------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            +SPDS +I +        ESDR     +Y+   +G     ++   + S     W+P G 
Sbjct: 298 VFSPDSKKIAYLQMEERNYESDR---RIVYIATLDGGRIVSLASKWDRSPDSLKWTPDGK 354

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            +  +     +  +  +  D   + +     +   ++A  +     S++ +        +
Sbjct: 355 TLYMSVEDRARGRLFTLPTDAGADYVPENFTDHGIVRAYHFLKDSTSVLTTATT--LWSN 412

Query: 417 KLYSIDLNGRNETLINTPAYASDPQ 441
            +Y+I  +  NE  +   A   DP+
Sbjct: 413 AIYTI-ASPDNEPKVLFSANEHDPE 436



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 76/206 (36%), Gaps = 17/206 (8%)

Query: 191 NSLCVMDRDGANIRYLTPSRD---------QILFEPRFSPNQQKVAYATYDDE----DIL 237
           + + ++  DG+++       +              P FSP+ +K+AY   ++     D  
Sbjct: 262 SYIFIVPHDGSSVAIPINGPESSAAADGIVGASSSPVFSPDSKKIAYLQMEERNYESDRR 321

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---T 294
            VY+      R       +     + +++ +GK   +SV+      ++++   + A    
Sbjct: 322 IVYIATLDGGRIVSLASKWDRSPDSLKWTPDGKTLYMSVEDRARGRLFTLPTDAGADYVP 381

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           E  T+   I  +  +  DS+ ++  +       +Y + S  ++ K +    E        
Sbjct: 382 ENFTDH-GIVRAYHFLKDSTSVLTTATTLWSNAIYTIASPDNEPKVLFSANEHDPELKGL 440

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDG 380
            P+     +   +  K    ++K +G
Sbjct: 441 GPEDIDEFYYDGNWTKVHAWIVKPEG 466


>gi|261202028|ref|XP_002628228.1| dipeptidyl-peptidase V [Ajellomyces dermatitidis SLH14081]
 gi|239590325|gb|EEQ72906.1| dipeptidyl-peptidase V [Ajellomyces dermatitidis SLH14081]
          Length = 729

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 69/205 (33%), Gaps = 34/205 (16%)

Query: 265 FSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTL----------FINISA 307
            S +GK      +  E          I+ V    ++     N              + S 
Sbjct: 238 LSPDGKTVAFMSKAPELPKANLTTSYIFIVPHDGSSVAIPINGPESSAAADGIVGASSSP 297

Query: 308 SYSPDSSQIVF--------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            +SPDS +I +        ESDR     +Y+   +G     ++   + S     W+P G 
Sbjct: 298 VFSPDSKKIAYLQMEERNYESDR---RIVYIATLDGGRIVSLASKWDRSPDSLKWTPDGK 354

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            +  +     +  +  +  D   + +     +   ++A  +     S++ +        +
Sbjct: 355 TLYMSVEDRARGRLFTLPTDAGADYVPENFTDHGIVRAYHFLKDSTSVLTTATT--LWSN 412

Query: 417 KLYSIDLNGRNETLINTPAYASDPQ 441
            +Y+I  +  NE  +   A   DP+
Sbjct: 413 AIYTI-ASPDNEPKVLFSANEHDPE 436



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 76/206 (36%), Gaps = 17/206 (8%)

Query: 191 NSLCVMDRDGANIRYLTPSRD---------QILFEPRFSPNQQKVAYATYDDE----DIL 237
           + + ++  DG+++       +              P FSP+ +K+AY   ++     D  
Sbjct: 262 SYIFIVPHDGSSVAIPINGPESSAAADGIVGASSSPVFSPDSKKIAYLQMEERNYESDRR 321

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---T 294
            VY+      R       +     + +++ +GK   +SV+      ++++   + A    
Sbjct: 322 IVYIATLDGGRIVSLASKWDRSPDSLKWTPDGKTLYMSVEDRARGRLFTLPTDAGADYVP 381

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           E  T+   I  +  +  DS+ ++  +       +Y + S  ++ K +    E        
Sbjct: 382 ENFTDH-GIVRAYHFLKDSTSVLTTATTLWSNAIYTIASPDNEPKVLFSANEHDPELKGL 440

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDG 380
            P+     +   +  K    ++K +G
Sbjct: 441 GPEDIDEFYYDGNWTKVHAWIVKPEG 466


>gi|119469599|ref|XP_001257954.1| WD repeat protein [Neosartorya fischeri NRRL 181]
 gi|119406106|gb|EAW16057.1| WD repeat protein [Neosartorya fischeri NRRL 181]
          Length = 537

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 70/210 (33%), Gaps = 18/210 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              ++L     + +   +FSP+   +A           V + DTR  +         + I
Sbjct: 160 YQQKFLLRGHLRGVSAVKFSPDSTMIA----SGGADGAVKVWDTRSGKLIHTFEGHLAGI 215

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVF 318
               +S +G     S   D+ + ++  ++ +     +            ++SP  + +V 
Sbjct: 216 STISWSPDGATIA-SGSDDKTIRLW--NVLTGKAHPIPFVGHHNYVYQIAFSPKGNMLVS 272

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E +++     +   R                 G LI      G    I +   
Sbjct: 273 GSY---DEAVFLWDVRSASVMRSLPAHSDPVSGIDVVWDGTLIVSCATDG---LIRIWDT 326

Query: 379 DGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
              Q  R LV + N  + A  +SP+G+ ++
Sbjct: 327 ATGQCLRTLVHEDNPPVTAVKFSPNGKFVL 356



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 17/197 (8%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G    +    S  + SG    ++ V D     + +        +    +SP+   +A  
Sbjct: 171 RGVSAVKFSPDSTMIASGGADGAVKVWDTRSGKLIHTFEGHLAGISTISWSPDGATIASG 230

Query: 230 TYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           + D      + L +    +  P       + +    FS  G   + S   DEA+ ++ V 
Sbjct: 231 SDDK----TIRLWNVLTGKAHPIPFVGHHNYVYQIAFSPKGNMLV-SGSYDEAVFLWDVR 285

Query: 289 LQSNATERLTNT----LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             S     L         I++   +  D + IV  +  +G  +++   + G   + +  +
Sbjct: 286 SAS-VMRSLPAHSDPVSGIDV--VW--DGTLIVSCAT-DGLIRIWDT-ATGQCLRTLVHE 338

Query: 345 KEASYFDPVWSPQGDLI 361
                    +SP G  +
Sbjct: 339 DNPPVTAVKFSPNGKFV 355


>gi|108760141|ref|YP_634277.1| Ig-like domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108464021|gb|ABF89206.1| bacterial Ig-like domain (group 2) protein [Myxococcus xanthus DK
           1622]
          Length = 867

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/296 (14%), Positives = 87/296 (29%), Gaps = 48/296 (16%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSG-IIKNSLCVMDRDGANIRYLTPSRDQIL-- 214
            S     S      D  S +         G   +  L + D DG+ +R LT +   +   
Sbjct: 589 FSPRDVHSEVIRSPDRKSVVWVDGRDKFGGIYFQGLLYIADADGSRVRRLTQASSSLCGE 648

Query: 215 FEPRFSPNQQKVAYATYDDEDILRV-----YLMDTRIDRAPKRIGNFRSMILAP------ 263
             P +SP+ Q +++      D         +    R D   +R      +   P      
Sbjct: 649 RMPEYSPDGQWISFMRSCSRDPYPGRDGLEFTFIIRADGTDERRVLISGINDMPPPVPIS 708

Query: 264 -----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                 FS + K         +   +++  L+  +   + N         +S    ++  
Sbjct: 709 PLVFSSFSRDSKTLYTVQYATKGAQLWAFSLEDGSARSIIN---------FSVQGQEMAS 759

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                     + M+    D           + + VW+     +   +  G    I     
Sbjct: 760 IVR-------FPMELPNGDLL------YHYWNEDVWTD--TWLERIRPDGTGREIVRPVM 804

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            GS+  LL     L     SP G  + ++ +      + +   +++G     +  P
Sbjct: 805 RGSRGELLQSLFTL-----SPDGTKVAYTERDPVTGVNTIMVSNIDGSEAVSMKNP 855



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 28/98 (28%)

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSP-----------SGRSLIFSRKKDGDTGSK----L 418
             ++ DGSQ R + +      P +SP             +S+++   +D   G      L
Sbjct: 569 FAVRPDGSQFRQITQAPT---PFFSPRDVHSEVIRSPDRKSVVWVDGRDKFGGIYFQGLL 625

Query: 419 YSIDLNGRNETLIN----------TPAYASDPQWVGFM 446
           Y  D +G     +            P Y+ D QW+ FM
Sbjct: 626 YIADADGSRVRRLTQASSSLCGERMPEYSPDGQWISFM 663


>gi|56415692|ref|YP_152767.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197364619|ref|YP_002144256.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56129949|gb|AAV79455.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197096096|emb|CAR61691.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 408

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGRIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGRIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 404



 Score = 43.1 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        RID    R  N  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGRIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|332665142|ref|YP_004447930.1| peptidase C14 caspase catalytic subunit p20 [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332333956|gb|AEE51057.1| peptidase C14 caspase catalytic subunit p20 [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 936

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 66/194 (34%), Gaps = 17/194 (8%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
            R  R P R G+   M+ A   S +G+ A +     +  DIY  D+ S      L++   
Sbjct: 52  LRTLRPPIRAGD-EGMLYAAALSPDGRVAAVGGW-SKNNDIYLFDVSSGELFLCLSDLPN 109

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           + +   +SPD   +       G   + + + +        ++     +   +   G  +A
Sbjct: 110 VILDLQFSPDGHYLAVVL--WGSNGIKIWRCSDWTLHVEDKNYGGDAYKLAFDAWGQRLA 167

Query: 363 FTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKK-------DGD 413
              + G    + +    G   +       S   A  +SP  R L             D  
Sbjct: 168 TVCYDG---HLRLYDATGKLLKKVKTTGGSKPNALAFSPDARLLAIGYNDSPKVQVLDAQ 224

Query: 414 TGSKLYSIDLNGRN 427
           T   LY+ D++G  
Sbjct: 225 TLQVLYAPDISGAT 238



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 82/239 (34%), Gaps = 33/239 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    + +L+    SP+ +  A   +   +   +YL D         + +  ++IL  +F
Sbjct: 59  IRAGDEGMLYAAALSPDGRVAAVGGWSKNN--DIYLFDVSSGELFLCLSDLPNVILDLQF 116

Query: 266 SSNGKRALISVQKDEAMDI-----YSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           S +G    + +     + I     +++ ++        N        ++     ++    
Sbjct: 117 SPDGHYLAVVLWGSNGIKIWRCSDWTLHVEDK------NYGGDAYKLAFDAWGQRLA-TV 169

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G  +LY   + G   K++     +      +SP   L+A       K    V   D 
Sbjct: 170 CYDGHLRLY--DATGKLLKKVKTTGGSKPNALAFSPDARLLAIGYNDSPK----VQVLDA 223

Query: 381 SQERLLVE---------DSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGR 426
              ++L           D  L + T+S +G SL     +   ++G    ++      GR
Sbjct: 224 QTLQVLYAPDISGATSIDQRLMSVTFSANGHSLAAGGFYRLFQNGRWQQQIRVWTQAGR 282



 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 91/292 (31%), Gaps = 50/292 (17%)

Query: 113 TGRVIKEGKDRLRVEF------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQ 164
            GR+  +   R  +        +LWD+     +          + R       D+  +Y 
Sbjct: 20  IGRISVDQGGRYLLTASNDKTAKLWDLGSGNLL---------RTLRP-PIRAGDEGMLYA 69

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           +     G           +V      N + + D     +         ++ + +FSP+  
Sbjct: 70  AALSPDGR--------VAAVGGWSKNNDIYLFDVSSGELFLCLSDLPNVILDLQFSPDGH 121

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +A   +    I +++           +  N+        F + G+R   +V  D  + +
Sbjct: 122 YLAVVLWGSNGI-KIWRCSDWTLHVEDK--NYGGDAYKLAFDAWGQRLA-TVCYDGHLRL 177

Query: 285 YSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQL-------YVMQSNGS 336
           Y  D      +++ T       + ++SPD+  +    +   K Q+        +   + S
Sbjct: 178 Y--DATGKLLKKVKTTGGSKPNALAFSPDARLLAIGYNDSPKVQVLDAQTLQVLYAPDIS 235

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIA----FTKFSGEKF--AIGVMKKDGSQ 382
               I    +       +S  G  +A    +  F   ++   I V  + G  
Sbjct: 236 GATSI----DQRLMSVTFSANGHSLAAGGFYRLFQNGRWQQQIRVWTQAGRG 283


>gi|315182490|gb|ADT89403.1| oligogalacturonate lyase [Vibrio furnissii NCTC 11218]
          Length = 389

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 25/190 (13%), Positives = 65/190 (34%), Gaps = 32/190 (16%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG N+R +   +  +      + P+   +AY +
Sbjct: 199 PFDDSTVGFCHEGPHDLVDARMWLVNEDGTNVRMIKEHAPGESCTHEFWIPDGSAMAYVS 258

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---------------I 274
           Y      R +Y  +       + +       L   F  +G   +                
Sbjct: 259 YFKGQTERVIYKANPETLENEEVMVMPPCSHLMSNF--DGTLMVGDGCDAPVDVADAESY 316

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTL-FINI----------SASYSPDSSQIVFESDRE 323
            ++ D    +Y ++ ++ +  +L       ++            S++P  + ++F SD E
Sbjct: 317 DIEND--PFLYIMNTKTKSYAKLAKHNTSWDVLDGDRQITHPHPSFTPGDTGVLFTSDFE 374

Query: 324 GKEQLYVMQS 333
           G   +Y+   
Sbjct: 375 GVPAIYIADV 384



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 69/199 (34%), Gaps = 28/199 (14%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F+++G + L +   D   + Y  DL +    +LT     N    +  D  +  F    E 
Sbjct: 45  FTTDGSKLLFAGDFDGNRNYYLADLNTQQATQLTEGKGDNTFGGFISDDDRSFFYVKNE- 103

Query: 325 KEQLYVMQSNGSDQKRIS-----QDKEASYFDPV--------------WSPQGDLIAFTK 365
              L  +     +++ I           ++                  W P      F +
Sbjct: 104 -LNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSACTKLVGIEILKRDWQPLTSWEKFAE 162

Query: 366 FSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYS 420
           F        ++K D   G  E +  E++ L  P + P    ++ F  +   D   ++++ 
Sbjct: 163 FYHTNPTCRLIKVDIQTGELEVIHQENAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWL 222

Query: 421 IDLNGRNETLI--NTPAYA 437
           ++ +G N  +I  + P  +
Sbjct: 223 VNEDGTNVRMIKEHAPGES 241



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 86/240 (35%), Gaps = 34/240 (14%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F+ +  K+ +A   D +  R Y +     +   ++   +       F S+  R
Sbjct: 38  NYFYQKCFTTDGSKLLFAGDFDGN--RNYYLADLNTQQATQLTEGKGDNTFGGFISDDDR 95

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL-------------------TNTLFINI-SASYSP 311
           +   V+ +  +++  VDL++   + +                   T  + I I    + P
Sbjct: 96  SFFYVKNE--LNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSACTKLVGIEILKRDWQP 153

Query: 312 DSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
            +S   F          +L  +     + + I Q+  A    P++ P     + F     
Sbjct: 154 LTSWEKFAEFYHTNPTCRLIKVDIQTGELEVIHQE-NAWLGHPIYRPFDDSTVGFCHEGP 212

Query: 369 EKF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSID 422
                  + ++ +DG+  R++ E +  ++ T   W P G ++ +     G T   +Y  +
Sbjct: 213 HDLVDARMWLVNEDGTNVRMIKEHAPGESCTHEFWIPDGSAMAYVSYFKGQTERVIYKAN 272



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 24/238 (10%), Positives = 65/238 (27%), Gaps = 37/238 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           + P      +A +   +     +         + I    + +  P +   +        +
Sbjct: 151 WQPLTSWEKFAEFYHTNPTCRLIKVDIQTGELEVIHQENAWLGHPIYRPFDDSTVGFCHE 210

Query: 278 KDEA---MDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ V+        +             + PD S + + S  +G+ +  +Y 
Sbjct: 211 GPHDLVDARMWLVNEDGTNVRMIKEHAPGESCTHEFWIPDGSAMAYVSYFKGQTERVIYK 270

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI------GVMK 377
                 + + +      S+    +   G L+              E + I       +M 
Sbjct: 271 ANPETLENEEVMVMPPCSHLMSNF--DGTLMVGDGCDAPVDVADAESYDIENDPFLYIMN 328

Query: 378 KDGSQERLLVEDSNLQ------------APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   L + +                P+++P    ++F+   +G     +Y  D+
Sbjct: 329 TKTKSYAKLAKHNTSWDVLDGDRQITHPHPSFTPGDTGVLFTSDFEG--VPAIYIADV 384



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 41/134 (30%), Gaps = 13/134 (9%)

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           Q+ FES  +   Q+ V +   +D           ++   ++  G  + F           
Sbjct: 10  QLTFESFIDSDTQVKVTRLTPTDVI----CHRNYFYQKCFTTDGSKLLFAGDFDGNRNYY 65

Query: 375 VMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +   +  Q   L E           S   RS  + + +       L  +DL    E +I 
Sbjct: 66  LADLNTQQATQLTEGKGDNTFGGFISDDDRSFFYVKNE-----LNLMKVDLETLEEQVIY 120

Query: 433 T--PAYASDPQWVG 444
           T    +     WV 
Sbjct: 121 TVDEEWKGYGTWVA 134


>gi|8886487|gb|AAF80478.1|AF163324_1 WSB-2 [Homo sapiens]
          Length = 404

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 83/216 (38%), Gaps = 23/216 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D+
Sbjct: 119 PDVSCLVLATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDK 176

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 177 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 233

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----------- 389
             +  ++S     +SP   L+    +      I      G + R L              
Sbjct: 234 KLEGHQSSVVSCDFSPDSALLVTASYDTN--VIMWDPYTGERLRSLHHTQVDPAMDDSDV 291

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S+L++  +SP G   ++      D   ++++++L
Sbjct: 292 HISSLRSVCFSPEG---LYLATVADDRLLRIWALEL 324



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/247 (12%), Positives = 71/247 (28%), Gaps = 41/247 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 16  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKN 75

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKRA---------------LISVQKDEAM 282
           +T+   +PK            +  +   S   ++                L +   D  +
Sbjct: 76  ETKGRGSPKEKTLDCGQIVWGLAFSLCLSPPSRKLWARHHPQVPDVSCLVLATGLNDGQI 135

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 136 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 194

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 195 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 252

Query: 403 SLIFSRK 409
            L+ +  
Sbjct: 253 LLVTASY 259


>gi|302887072|ref|XP_003042425.1| hypothetical protein NECHADRAFT_51778 [Nectria haematococca mpVI
           77-13-4]
 gi|256723335|gb|EEU36712.1| hypothetical protein NECHADRAFT_51778 [Nectria haematococca mpVI
           77-13-4]
          Length = 1103

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 77/238 (32%), Gaps = 22/238 (9%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V +  G N+  L      ++F P+ SP +Q  A+ +     I  V L++   D   + + 
Sbjct: 680 VSNATGINLAPLQVYSSALVFAPKNSPIRQ--AFRSQIPSWITLVPLVEPDWDTCLRVLE 737

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDS 313
             R  + A  FS +    L+S   D A+ ++  +  +      L  T     + + SPD+
Sbjct: 738 GHRGPVNAVAFSLD-SSILVSASMDRAVRVW--NWDTGECIYELKGTRAPICATALSPDA 794

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +   +       + +                       +S       F        AI
Sbjct: 795 EVVAAAAI---NGIIRIWSLATGACVHELMADNGEISSMAFSADSR---FLSAVSSDMAI 848

Query: 374 GVMKKDGSQ-ERLLVEDSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               +D     + L+    +    +   +SP   ++            +++S    GR
Sbjct: 849 YSWSRDTGACVQELMPPGGMVRTVEVAAFSPDSETIA----TGSVKKVQIWS-SATGR 901


>gi|158318335|ref|YP_001510843.1| transcriptional activator domain-containing protein [Frankia sp.
            EAN1pec]
 gi|158113740|gb|ABW15937.1| transcriptional activator domain [Frankia sp. EAN1pec]
          Length = 1733

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 62/341 (18%), Positives = 114/341 (33%), Gaps = 56/341 (16%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+++  G     V  R++D+    QI                HT             G  
Sbjct: 1321 GQLVAAGDGGNVV--RVFDLASGLQIGAS----------LALHT------------GGPA 1356

Query: 174  NSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                      VV SG  + ++  + R    I  +      + F   F P  Q+V      
Sbjct: 1357 LPTAFLPDGRVVTSGPHEAAVWQVGRTTPPIGLVLGGHQGLTFG-TFVPGGQEVVTRGIS 1415

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D  + R    D    R   R+ +    + AP  FS +G+    +   D  + ++  D ++
Sbjct: 1416 DSGLRR---WDAGTGRELGRLLD--GRVQAPVTFSPDGRLLATAGADDNQLALW--DART 1468

Query: 292  NATERLT----NTLFINISASYSPDSSQIVFESDREGKEQLYVM--QSNGSDQKRISQDK 345
               ERL             A +SP   +IV  +D  G  +++ +    + +  +++  D 
Sbjct: 1469 G--ERLAGLDGTRGGRRSYADWSPAGDRIVTGAD--GSVRIWDVSDPRHPASVEQLDPDG 1524

Query: 346  EA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWS 398
            E          PV+S  G  IA   F G    +        +++       ++L    ++
Sbjct: 1525 EPHPGTPDSQWPVFSHDGQWIAVHDFPGHTMTVF--DAASGRKQWSTSAPVADLAGIAFA 1582

Query: 399  PSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYAS 438
            P  ++L  S       G ++   D   G  E  +  P+   
Sbjct: 1583 PDDKTLAIS--YGARVGGRVSFHDTGTGHVERTLQIPSGGG 1621



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/297 (16%), Positives = 89/297 (29%), Gaps = 78/297 (26%)

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            RD       FSP+ + +A A+    ++  V   D R        G    ++    FS +G
Sbjct: 1266 RDLPGLTGSFSPDGRSLATASDGRVEVWDVASGDRRGVPLTGLTGALPGIL----FSPDG 1321

Query: 270  KRALISVQKDEAMDIYSVDLQSN-----ATERLTNTLFINISASYSPDSS--------QI 316
            +        D    +   DL S      +    T    +    ++ PD            
Sbjct: 1322 QLVA---AGDGGNVVRVFDLASGLQIGASLALHTGGPALPT--AFLPDGRVVTSGPHEAA 1376

Query: 317  VFESDRE---------------------GKEQLYVMQSNGSDQKR--------ISQDKEA 347
            V++  R                      G +++     + S  +R        + +  + 
Sbjct: 1377 VWQVGRTTPPIGLVLGGHQGLTFGTFVPGGQEVVTRGISDSGLRRWDAGTGRELGRLLDG 1436

Query: 348  SYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGR 402
                PV +SP G L+A       + A+       + ERL               WSP+G 
Sbjct: 1437 RVQAPVTFSPDGRLLATAGADDNQLALW---DARTGERLAGLDGTRGGRRSYADWSPAGD 1493

Query: 403  SLIFSRKKDGDTGSKLYSI------------DLNGRNETLINT---PAYASDPQWVG 444
             ++       D   +++ +            D +G           P ++ D QW+ 
Sbjct: 1494 RIV----TGADGSVRIWDVSDPRHPASVEQLDPDGEPHPGTPDSQWPVFSHDGQWIA 1546



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 64/203 (31%), Gaps = 17/203 (8%)

Query: 212  QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
               F P  SP+ + +A           V L D +  R  +      +  +A  FSS+GK 
Sbjct: 1097 SPSFYPSVSPDGRLLA----SPGQDGTVDLWDLQAGRLLRTFTWPTARQVA-MFSSDGK- 1150

Query: 272  ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             L +   D  + ++   +               +   + P     +F     G+  ++  
Sbjct: 1151 LLTAGGNDGTVVVWDA-VTGRQVGAPVKVAGGFVYGEFDPTDPSRLFAVSDTGEVAIWDR 1209

Query: 332  QSNG-----SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                         R +  +  +    V S  G  +A    S +     V    GS+  + 
Sbjct: 1210 AIPDRPVQLGPPLRFTP-RAGALPVAVVSADGRRLAAGTSSPDSST-RVWDL-GSRTVIR 1266

Query: 387  VEDSNLQAPTWSPSGRSLIFSRK 409
                     ++SP GRSL  +  
Sbjct: 1267 DLPGLTG--SFSPDGRSLATASD 1287



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 69/236 (29%), Gaps = 35/236 (14%)

Query: 112  VTGRVIKEGKDRLRV-------EFRLWDVKDRKQIIGKKFFSSPASWRKIAH--TISDDI 162
            V   V      RL         +  LWD +  +++ G     +    R  A      D I
Sbjct: 1438 VQAPVTFSPDGRLLATAGADDNQLALWDARTGERLAGL--DGTRGGRRSYADWSPAGDRI 1495

Query: 163  YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
                     D + RI  VS+      ++     +D DG        S+      P FS +
Sbjct: 1496 VTGA-----DGSVRIWDVSDPRHPASVEQ----LDPDGEPHPGTPDSQ-----WPVFSHD 1541

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             Q +A   +       + + D    R         + +    F+ + K   IS       
Sbjct: 1542 GQWIAVHDF---PGHTMTVFDAASGRKQWSTSAPVADLAGIAFAPDDKTLAISYGARVGG 1598

Query: 283  DIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +   D  +   ER   + +   I     +    S ++   D  G     +  +  
Sbjct: 1599 RVSFHDTGTGHVERTLQIPSGGGIE----FLRGGSVVMTTGDSAGSSAAQLWDAAT 1650


>gi|238910144|ref|ZP_04653981.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
          Length = 408

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 64/205 (31%), Gaps = 38/205 (18%)

Query: 253 IGNFRSMILAPRFSSNGKRA--LISVQ----KDEAMDIYSVDLQSNA-----------TE 295
           +GN +   +    S  G++   L  V     ++         L                 
Sbjct: 211 VGNRQIAFIGDTLSPTGQKVPELFIVDLPCHENGWKQAGDTPLTGTESTMPSPPLGVVQR 270

Query: 296 RLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDK 345
           RLT T       +      +   +P ++ I F   D  G  QL+++   G + ++++   
Sbjct: 271 RLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHA 330

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSG 401
                   W P G  +     +     I        +   L        +  A  +SP G
Sbjct: 331 TGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGRIDFLTARHDNPPSADAVVFSPDG 386

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGR 426
           R + +  +  G    +L+ +   GR
Sbjct: 387 RHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGRIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 404



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        RID    R  N  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGRIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|83814626|ref|YP_444253.1| hypothetical protein SRU_0100 [Salinibacter ruber DSM 13855]
 gi|83756020|gb|ABC44133.1| hypothetical protein SRU_0100 [Salinibacter ruber DSM 13855]
          Length = 339

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 70/207 (33%), Gaps = 12/207 (5%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           DT     P  +         P F  +G   + +   D   D+Y           +T+T  
Sbjct: 89  DTLRMGRPTPVTTRPGYDNQPAFLPDGSGLVWTAIHDGQADVYRKIEDEGGPAPVTDTPE 148

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S +  P  +  +   + +G+++L+  +++G+    +  D + S     W     +  
Sbjct: 149 SEFSPTPRPGGALTLVRVEADGRQRLWRYRADGTPDAPVLPDAD-SVGYHAWLDSSRVAL 207

Query: 363 FTKFSGEKFAIGVMK--KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           F   +     +  +K   D    R +   S    P     GR+ +   +   D+   ++ 
Sbjct: 208 FVLGAPPTLHVANVKSGTDTVVARRI-GRSLQSVP-----GRADVSFVQVGPDSSVAIHR 261

Query: 421 ID---LNGRNETLINTPAYASDPQWVG 444
           +D   L  R  T   T A   D  W  
Sbjct: 262 LDGASLTTRRLTEAPTNAPTGDHAWTP 288



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 58/199 (29%), Gaps = 11/199 (5%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
               +R     +P F P+   + +    D             +  P  + +      +P 
Sbjct: 97  TPVTTRPGYDNQPAFLPDGSGLVWTAIHDGQAD--VYRKIEDEGGPAPVTDTPESEFSPT 154

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
               G   L+ V+ D    ++           +          ++   S   +F      
Sbjct: 155 PRPGGALTLVRVEADGRQRLWRYRADGTPDAPVLPDADSVGYHAWLDSSRVALFVL--GA 212

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              L+V          +++    S       P    ++F    G   ++ + + DG+   
Sbjct: 213 PPTLHVANVKSGTDTVVARRIGRSLQSV---PGRADVSFV-QVGPDSSVAIHRLDGAS-- 266

Query: 385 LLVEDSNLQAPTWSPSGRS 403
            L      +APT +P+G  
Sbjct: 267 -LTTRRLTEAPTNAPTGDH 284


>gi|182414765|ref|YP_001819831.1| YVTN beta-propeller repeat-containing protein [Opitutus terrae
           PB90-1]
 gi|177841979|gb|ACB76231.1| 40-residue YVTN family beta-propeller repeat protein [Opitutus
           terrae PB90-1]
          Length = 821

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 89/235 (37%), Gaps = 40/235 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P+ ++ A+ +   +D + V  + T    A   +G+    +L       GK   +   
Sbjct: 281 AFTPDGRR-AFVSNRLDDTVSVVDVATHQVTATIEVGDEPHGVL---VDREGKHLYV--L 334

Query: 278 KDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIV-------FESDREGK-EQL 328
                ++  +DL S    +RL+ +       + SPD   IV       +  DR     +L
Sbjct: 335 NTSIDNVSVIDLASLQEVKRLSASRSP-WDLALSPDGQTIVVTNVLSRYTGDRNPSLSEL 393

Query: 329 YVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--------------I 373
            V+ +  +  K RI+           W P G+   FT+   +                 +
Sbjct: 394 TVIDTARAVVKDRITVPGANLLEGIAWHPSGEYAVFTELRTKNLVPMTRINHGWTITNGL 453

Query: 374 GVMKKDGSQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           G++  DG+ +++L++ +++  P       +P GR  + +          +  +DL
Sbjct: 454 GLLWADGTVDQVLLDQNDICFPDPTDIAITPDGRLAVVTSSSSDR----VAVVDL 504



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 87/215 (40%), Gaps = 42/215 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++ +   +    + V    TR      ++G   + I    F+ +G+RA +S +
Sbjct: 239 ALSPDNREL-WVACEQAGTIAVVDTATRTKALEFQVGGQPTEI---AFTPDGRRAFVSNR 294

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ----- 332
            D+ +    VD+ +    ++T T+ +            +V   DREGK  LYV+      
Sbjct: 295 LDDTVS--VVDVAT---HQVTATIEVGDEPH-----GVLV---DREGK-HLYVLNTSIDN 340

Query: 333 ------SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--------FSGEKFAIGVMKK 378
                 ++  + KR+S  +  S +D   SP G  I  T          +     + V+  
Sbjct: 341 VSVIDLASLQEVKRLSASR--SPWDLALSPDGQTIVVTNVLSRYTGDRNPSLSELTVIDT 398

Query: 379 DGSQE--RLLVEDSN-LQAPTWSPSGRSLIFSRKK 410
             +    R+ V  +N L+   W PSG   +F+  +
Sbjct: 399 ARAVVKDRITVPGANLLEGIAWHPSGEYAVFTELR 433


>gi|171694049|ref|XP_001911949.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946973|emb|CAP73777.1| unnamed protein product [Podospora anserina S mat+]
          Length = 576

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 84/271 (30%), Gaps = 32/271 (11%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D  G + R     +      P     +Q++A    D ++      +       P    +
Sbjct: 216 WDGAGGDSRRKLLRKLSESISPSVMLPEQRLAVLLNDLKNNQIEKCLYHTTTNPPSLYSD 275

Query: 256 FR------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            R                    +   RFS NG+R            I   + Q+    R+
Sbjct: 276 HRCEHSQFPTEVMVELDKQQGEVWQIRFSPNGERLATCGSAKG---ICIWNTQTFNHVRV 332

Query: 298 TNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            NT    +S  ++SPDS+ ++  S  +G  Q  V  +   +     +          W P
Sbjct: 333 INTHDAEVSNIAWSPDSTMLLSCS-MDG--QAKVWNTQTGELVVALEKFGEPVSSAGWLP 389

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G           K ++      GS           +    S +G  L+    + G    
Sbjct: 390 DGRTFITGSLDKAK-SLCEWDLSGSLLYNWTRRHRTEDLVVSANGEWLVAMDDRRGVHIY 448

Query: 417 KL----YSIDLNGRNETLINTPAYASDPQWV 443
            +    Y +DL    E+ + + + + D +W+
Sbjct: 449 HIPRREYEVDL--ILESRLTSVSLSQDSKWL 477



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 82/245 (33%), Gaps = 31/245 (12%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +++ RFSPN +++A           + + +T+     + I    + +    +S +    L
Sbjct: 298 VWQIRFSPNGERLATC----GSAKGICIWNTQTFNHVRVINTHDAEVSNIAWSPD-STML 352

Query: 274 ISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +S   D    ++  + Q+      L        SA + PD    +     +  + L    
Sbjct: 353 LSCSMDGQAKVW--NTQTGELVVALEKFGEPVSSAGWLPDGRTFI-TGSLDKAKSLCEWD 409

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            +GS     +  +     D V S  G+ +             + +++   + +L  +S L
Sbjct: 410 LSGS--LLYNWTRRHRTEDLVVSANGEWLVAMDDRRGVHIYHIPRREYEVDLIL--ESRL 465

Query: 393 QAPTWSPSGRSL------------------IFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            + + S   + L                  +F + K    G  +      G  E L+ + 
Sbjct: 466 TSVSLSQDSKWLLVNTVDDEALLYDFRTKEVFQKYKGHTGGEVIIRAGFGGAGENLVISG 525

Query: 435 AYASD 439
           +   +
Sbjct: 526 SEDGN 530



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 58/178 (32%), Gaps = 12/178 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +C+ +    N   +  + D  +    +SP+   +   + D     +  + +T+       
Sbjct: 319 ICIWNTQTFNHVRVINTHDAEVSNIAWSPDSTMLLSCSMDG----QAKVWNTQTGELVVA 374

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSP 311
           +  F   + +  +  +G+   I+   D+A  +   DL  +     T      ++    S 
Sbjct: 375 LEKFGEPVSSAGWLPDGRT-FITGSLDKAKSLCEWDLSGSLLYNWTRRHRTEDL--VVSA 431

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +   +V   DR G   +Y +     +   I    E+       S     +       E
Sbjct: 432 NGEWLVAMDDRRGV-HIYHIPRREYEVDLIL---ESRLTSVSLSQDSKWLLVNTVDDE 485



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 17/148 (11%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SP+  ++      +G   + +  +   +  R+    +A   +  WSP   ++      
Sbjct: 302 RFSPNGERLATCGSAKG---ICIWNTQTFNHVRVINTHDAEVSNIAWSPDSTMLLSCSMD 358

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G+     V      +  + +E       +  W P GR+ I       D    L   DL+G
Sbjct: 359 GQA---KVWNTQTGELVVALEKFGEPVSSAGWLPDGRTFITGSL---DKAKSLCEWDLSG 412

Query: 426 ------RNETLINTPAYASDPQWVGFMD 447
                            +++ +W+  MD
Sbjct: 413 SLLYNWTRRHRTEDLVVSANGEWLVAMD 440


>gi|325915130|ref|ZP_08177456.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325538652|gb|EGD10322.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 771

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 47/299 (15%), Positives = 96/299 (32%), Gaps = 39/299 (13%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN-----------IRYLTPSRDQ 212
           Q +   +G    R   V+         +       DG N           ++     R  
Sbjct: 150 QLLQRPRGFGVVRDPDVAADTTPRRSPDGQWEALADGWNLVVRRVADGQLVQRTDDGRAD 209

Query: 213 ILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             F+P    +SP+ Q++A          RV  ++       + + + + +   P  + + 
Sbjct: 210 DYFDPDSIAWSPDSQRLAVYRVRPGTARRVTRVEAAPAGRLEPVVHTQ-LYPKPGDAVDV 268

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +R ++ +  D       VD        L  T +      + PD   + FES + G + + 
Sbjct: 269 ERPVL-LAVDGTRR--VVDNA------LFATPYSLSPLQWRPDGRSVSFESVQRGFQHMR 319

Query: 330 VMQSN-GSDQKRI-------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDG 380
           V+  +  S + ++       +       F       G+ I +         + +   + G
Sbjct: 320 VISVDASSGRAQVAVAEDARTFVYADRSFHHEVDAHGNEILWISERDGWRHLYLFDGRSG 379

Query: 381 SQERLLVEDSNLQAPTWSPSG--RSLIFSRKK----DGDTGSKLYSIDLNGRNETLINT 433
             +R L     +           R + F+             +LYS+D +GR  T + T
Sbjct: 380 KPKRQLTRGPWVVRDVLKVDEAQRRIWFTASGMDAGKDPYYRQLYSVDFDGRKLTRLTT 438



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 70/229 (30%), Gaps = 57/229 (24%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----SASYSPDSS 314
              PR S +G+   ++    +  ++    +      + T+    +      S ++SPDS 
Sbjct: 169 DTTPRRSPDGQWEALA----DGWNLVVRRVADGQLVQRTDDGRADDYFDPDSIAWSPDSQ 224

Query: 315 QIVFESDREGK--------------------EQLYVMQSNGSDQKR-------------- 340
           ++     R G                      QLY    +  D +R              
Sbjct: 225 RLAVYRVRPGTARRVTRVEAAPAGRLEPVVHTQLYPKPGDAVDVERPVLLAVDGTRRVVD 284

Query: 341 -ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAP- 395
                   S     W P G  ++F         + V+  D   G  +  + ED+      
Sbjct: 285 NALFATPYSLSPLQWRPDGRSVSFESVQRGFQHMRVISVDASSGRAQVAVAEDARTFVYA 344

Query: 396 --TWSP----SGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYA 437
             ++       G  +++  ++DG     LY  D  +G+ +  +    + 
Sbjct: 345 DRSFHHEVDAHGNEILWISERDG--WRHLYLFDGRSGKPKRQLTRGPWV 391


>gi|255010900|ref|ZP_05283026.1| putative alanyl dipeptidyl peptidase [Bacteroides fragilis 3_1_12]
 gi|313148707|ref|ZP_07810900.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313137474|gb|EFR54834.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 845

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 52/262 (19%), Positives = 84/262 (32%), Gaps = 45/262 (17%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRI---------------DRAPKRIGNFR 257
            +SPN+  + Y        DD  + R+     RI               +   +R+    
Sbjct: 300 SWSPNEDFLIYYPREEGVKDDGPLKRIVSPADRIPNTRGRSFLARYDIANGTSERLTYGN 359

Query: 258 SMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYS 310
                   S +GK  L S  K+           ++ V+L++ A + L         ASYS
Sbjct: 360 HSTYMQDISPDGKYLLYSSSKENITQRPFSLSSLFQVNLETLAVDTLFFEDRFLGGASYS 419

Query: 311 PDSSQIVFESDRE-----GKE------------QLYVMQSNGSDQKRISQDKEASYFDPV 353
           PD  Q++  +  E     GK             Q ++M         I+++   S     
Sbjct: 420 PDGRQLLLTASPEAFDGIGKNCGNHPIANDFDSQAFIMDLATRKIDPITKEFNPSVNFLQ 479

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           W+     I F+    +   I      D   E+L +E     A   S +  SL     +  
Sbjct: 480 WNKGDGCIYFSTNDEDCRNIYRYSPKDRKFEKLNLETDVTSAFALSENNPSLAAYIGQGC 539

Query: 413 DTGSKLYSIDLNGRNETLINTP 434
                 Y  DL  +   LI  P
Sbjct: 540 YNAGVAYVYDLKKKTSRLIADP 561



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 75/232 (32%), Gaps = 29/232 (12%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPS-RDQILFEPRFSPNQQKVA--YATYDDEDILRVY 240
           V     K   C  D D  +   L  +           SP+ + +   Y         R Y
Sbjct: 177 VKDDKFKEVACSTDPDQKHRFALDNTVYGNRAIAVSISPDGKYLLTRYWDNHSLKRSRTY 236

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              T +      + N R  +   R+     +   +    E  D+ ++D  +   E L   
Sbjct: 237 CELTELKTGKVLLTNLRDGM---RWMPKSNKLYYTAVASEGNDVITLDPITLKEEVLLQG 293

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +      S+SP+   +++    EG +       +    KRI             SP  D 
Sbjct: 294 I-PEQGFSWSPNEDFLIYYPREEGVK-------DDGPLKRI------------VSP-ADR 332

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           I      G  F       +G+ ERL   + +      SP G+ L++S  K+ 
Sbjct: 333 IP--NTRGRSFLARYDIANGTSERLTYGNHSTYMQDISPDGKYLLYSSSKEN 382


>gi|91088247|ref|XP_974080.1| PREDICTED: similar to WD repeat domain 51B [Tribolium castaneum]
 gi|270011818|gb|EFA08266.1| hypothetical protein TcasGA2_TC005896 [Tribolium castaneum]
          Length = 305

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 81/230 (35%), Gaps = 10/230 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +    +++ V +       Y     +  +    +SPN + +A  + D    LR+++    
Sbjct: 35  TSSEDHTIMVWNFAQNTRSYNFKGHNDSVTCVEYSPNGEFLASCSED--QTLRIWVTKQS 92

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +    S I    F+  G + L +   D+++ ++SV  +    +          
Sbjct: 93  QMGTCLEMRAHLSPIRCLAFAPQGNQIL-TGSNDKSIKLWSVTRK-QFLKSFVGHTSWVR 150

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S  ++PD  +IV  +D    + + V            +  +A        P G+ IA   
Sbjct: 151 SLQFAPDGQKIVSCAD---DQTVRVWDPTTGQNVHTFRTSKAGPCHVALHPDGNHIAVAM 207

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            SG      V  +  +Q  +L + +      W P    L+ +  KDG   
Sbjct: 208 NSGSVRVYDVRTEKLNQHYVLHDSTTC--VCWHPCANFLL-TSGKDGKVN 254


>gi|237726249|ref|ZP_04556730.1| dipeptidyl aminopeptidase [Bacteroides sp. D4]
 gi|229434775|gb|EEO44852.1| dipeptidyl aminopeptidase [Bacteroides dorei 5_1_36/D4]
          Length = 759

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 63/212 (29%), Gaps = 65/212 (30%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDR-----EGKEQLYVMQSNG 335
                ++ Q+     + N +       +S D+S++ ++ + R     + +   +V+    
Sbjct: 98  PANMLLNPQTGKPISVRNFI-------FSEDNSKVLIYTNTRRVWRYDTRGDYWVLNLKN 150

Query: 336 SDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
              +++     EA+     +SP    +A+   +     I V      +   L +D N + 
Sbjct: 151 GKLQQLGKSLPEATLMFAKFSPDASRVAYVSRN----NIYVESLADGKINQLTQDGNNEI 206

Query: 394 -----------------APTWSPSGRSLIFS-RKKDGDTGSKLYS--------------- 420
                               WSP G+ + +      G     + +               
Sbjct: 207 VNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYP 266

Query: 421 -------------IDLNGRNETLINTPAYASD 439
                        +  +G N T +  P  A +
Sbjct: 267 KAGTANSAVKVGYVSADGGNTTWLALPGDARN 298



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 77/284 (27%), Gaps = 71/284 (25%)

Query: 219 FSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRA 272
           FS +  KV   T     +  +     ++++ +  +  +   +     L   +FS +  R 
Sbjct: 118 FSEDNSKVLIYTNTRRVWRYDTRGDYWVLNLKNGKLQQLGKSLPEATLMFAKFSPDASRV 177

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFIN-----------------ISASYSPDSSQ 315
               + +    IY   L      +LT                           +SPD   
Sbjct: 178 AYVSRNN----IYVESLADGKINQLTQDGNNEIVNGTFDWVYEEEFNCRDGFRWSPDGQY 233

Query: 316 IVF-ESDREGKEQLYVMQSNGS---DQKRISQDKEASYFDPV----WSPQGD-------- 359
           I + +SD +G     ++ +  S     +R    K  +    V     S  G         
Sbjct: 234 IAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWLALP 293

Query: 360 --------------------LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN------LQ 393
                                I     +     + + K   +    +  D +        
Sbjct: 294 GDARNHYIPRMEFIPGCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLETND 353

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              W    +   +  ++DG     LY +  +G+    I   A+ 
Sbjct: 354 NVRWLKGNKYFTWESERDG--WRHLYRVSRDGKEIKPITQGAFD 395



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 105/322 (32%), Gaps = 59/322 (18%)

Query: 174 NSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQ 223
            SR+ +VS +   V  +    +  + +DG N   +       ++E         R+SP+ 
Sbjct: 174 ASRVAYVSRNNIYVESLADGKINQLTQDGNNE--IVNGTFDWVYEEEFNCRDGFRWSPDG 231

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRSMILAPRFSSNG---KRAL 273
           Q +AY   D +      +++      PK       + G   S +     S++G       
Sbjct: 232 QYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWLA 291

Query: 274 --------ISVQKDEAMDIYSVDLQSNATERLTNTLFI---------------------- 303
                      + +       + +Q     + TN ++I                      
Sbjct: 292 LPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLET 351

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N +  +   +    +ES+R+G   LY +  +G + K I+Q       +         + F
Sbjct: 352 NDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKGFVYF 411

Query: 364 TKFSGEKFAIGVMKK----DGSQERL-LVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSK 417
                      + +     +G  +RL  V+ S       SPSG+  +      +      
Sbjct: 412 IASPDNFTQRYLYQARLFGNGEVKRLSPVDQSGQHRYIMSPSGKWAVHTFSNSETPPVID 471

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           + S   + ++  LI   A A +
Sbjct: 472 MVSFPAH-KSVRLITDNAKAKE 492



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 89/276 (32%), Gaps = 29/276 (10%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D + I   +  +    W  I + + D IY  I            F      +      + 
Sbjct: 230 DGQYIAYWQSDTQGTGWFDIINNV-DSIYPKIQR----------FPYPKAGTANSAVKVG 278

Query: 195 VMDRDGANIRYL-TPSRDQILFEPR--FSPNQQKVAYATY-DDEDILRVYLMDTRIDRAP 250
            +  DG N  +L  P   +  + PR  F P   ++        ++  +V++     +   
Sbjct: 279 YVSADGGNTTWLALPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNKVWIAKIGENTPV 338

Query: 251 KRIGNFRSMILA----PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI--- 303
               +  +  L      R+    K      ++D    +Y V       + +T   F    
Sbjct: 339 NIFTDQDAAWLETNDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEIKPITQGAFDYIQ 398

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDL 360
            + A    D   + F +  +   Q Y+ Q+      + KR+S   ++     + SP G  
Sbjct: 399 EVGADM--DKGFVYFIASPDNFTQRYLYQARLFGNGEVKRLSPVDQSGQHRYIMSPSGKW 456

Query: 361 IAFT-KFSGEKFAIGVMK-KDGSQERLLVEDSNLQA 394
              T   S     I ++        RL+ +++  + 
Sbjct: 457 AVHTFSNSETPPVIDMVSFPAHKSVRLITDNAKAKE 492



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 91/316 (28%), Gaps = 61/316 (19%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPS-RDQILFEPRFSPNQQKVAYATYDD---EDI 236
           +  V     +    V++     ++ L  S  +  L   +FSP+  +VAY + ++   E +
Sbjct: 131 TRRVWRYDTRGDYWVLNLKNGKLQQLGKSLPEATLMFAKFSPDASRVAYVSRNNIYVESL 190

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMIL--------APRFSSNGKRALIS---VQKDEAMDIY 285
               +     D   + +      +           R+S +G+         Q     DI 
Sbjct: 191 ADGKINQLTQDGNNEIVNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDII 250

Query: 286 S----------------------------VDLQSNATERLTNTLFINISASYSPD----- 312
           +                            V      T  L   L  +    Y P      
Sbjct: 251 NNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWL--ALPGDARNHYIPRMEFIP 308

Query: 313 SSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTK 365
               +F    +  +   ++++ +   +    I  D++A++     +  W        +  
Sbjct: 309 GCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKYFTWES 368

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS---GRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DG + + + + +             G  + F    D  T   LY   
Sbjct: 369 ERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKG-FVYFIASPDNFTQRYLYQAR 427

Query: 423 LNGRNETLINTPAYAS 438
           L G  E    +P   S
Sbjct: 428 LFGNGEVKRLSPVDQS 443


>gi|168464862|ref|ZP_02698754.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|195632113|gb|EDX50597.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
          Length = 408

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGRIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGRIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 404



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        RID    R  N  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGRIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|124006072|ref|ZP_01690909.1| hypothetical protein M23134_02235 [Microscilla marina ATCC 23134]
 gi|123988479|gb|EAY28125.1| hypothetical protein M23134_02235 [Microscilla marina ATCC 23134]
          Length = 635

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 79/254 (31%), Gaps = 60/254 (23%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + + + +   +                 R   +R      ++  +G     S +
Sbjct: 56  SISPDGKALFFMSGRGQQSWS-----------TPRYTRYRG-----KWEHDGD-IWYSRR 98

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-----DREGKEQLYVMQ 332
            +      +         R  N+       + SPD   + F+S     +R+G    Y  +
Sbjct: 99  VNGNWRYPTC------LPRTVNSRSGEDEPNISPDGQTVYFQSWYGAWERKGGP-YYKAR 151

Query: 333 SNGSD--------------------QKRISQDKEASYFDPV-WSPQGD-LIAFTKFSGEK 370
             G+                     ++R  +       D    S  G   I        K
Sbjct: 152 LKGTRWSFPQGLGEGINQFFKERALKQRYKRGPNNYATDGATMSADGRTFIVAVGVYNGK 211

Query: 371 FAIGVMKKDG----SQERLL--VEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLY--SI 421
             + + ++      S  R L      N ++P  +  G++L F+     G  G ++   +I
Sbjct: 212 MDLYISRRGRYGRWSYLRRLSVSTRGNERSPFLAADGKTLFFASDGYGGYGGLEILKTTI 271

Query: 422 DLNGRNETLINTPA 435
           + +G +  ++N  A
Sbjct: 272 NPDGSHGKVVNLGA 285



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 40/141 (28%), Gaps = 23/141 (16%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           N+ +   + S SPD   + F S R                ++       + +   W   G
Sbjct: 47  NSKYRETNLSISPDGKALFFMSGRG---------------QQSWSTPRYTRYRGKWEHDG 91

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG--DTGS 416
           D I +++     +            R +   S    P  SP G+++ F          G 
Sbjct: 92  D-IWYSRRVNGNWRYPTCLP-----RTVNSRSGEDEPNISPDGQTVYFQSWYGAWERKGG 145

Query: 417 KLYSIDLNGRNETLINTPAYA 437
             Y   L G   +        
Sbjct: 146 PYYKARLKGTRWSFPQGLGEG 166



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 71/262 (27%), Gaps = 54/262 (20%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              T  +G +           V+G  +   C+             SR     EP  SP+ 
Sbjct: 78  PRYTRYRGKWEHDGDIWYSRRVNGNWRYPTCL--------PRTVNSRSGED-EPNISPDG 128

Query: 224 QKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMIL----------------- 261
           Q V + ++               +       P+ +G   +                    
Sbjct: 129 QTVYFQSWYGAWERKGGPYYKARLKGTRWSFPQGLGEGINQFFKERALKQRYKRGPNNYA 188

Query: 262 --APRFSSNGKR-ALISVQKDEAMDIYSVDLQSN-----ATERLT-NTLFINISASYSPD 312
                 S++G+   +     +  MD+Y +  +          RL+ +T     S   + D
Sbjct: 189 TDGATMSADGRTFIVAVGVYNGKMDLY-ISRRGRYGRWSYLRRLSVSTRGNERSPFLAAD 247

Query: 313 SSQIVFESDREGKEQLY-----VMQSNGSDQKRIS----QDKEASYFDPVWSPQGDLIAF 363
              + F SD  G           +  +GS  K ++     +     +  +    G    F
Sbjct: 248 GKTLFFASDGYGGYGGLEILKTTINPDGSHGKVVNLGAPFNTYLDDYGFIMPASGQDAYF 307

Query: 364 TKFSGEKFAIGVMKKDGSQERL 385
            +       I       +  ++
Sbjct: 308 VRQGD----IYYADVKNANPQI 325


>gi|13173175|gb|AAK14331.1|AF326340_1 unknown protein i8 [Aedes aegypti]
          Length = 335

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 10/181 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S   K SL  ++  G   + L P   +      +SP+ + +A    D      + + D 
Sbjct: 150 GSHEGKISLYSVES-GKPEQVLDPQNGKFTLSIAYSPDGKYIASGAIDG----IINIFDV 204

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  + +      + +  FS +  + L++   D  M +Y V   S+    L+      
Sbjct: 205 AAGKVAQTLEGHAMSVRSLCFSPD-SQMLLTASDDGHMKLYDV-AHSDVVGTLSGHSSWV 262

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S S+S D     F S    K  + +            +D +   +   +SP    +   
Sbjct: 263 LSVSFSGDGKS--FTSSSSDKT-VKIWNVAERQCLHTFEDHQDQVWGVKYSPDSSKVISV 319

Query: 365 K 365
            
Sbjct: 320 S 320



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 67/190 (35%), Gaps = 17/190 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           RV ++D   +   K    F      +++   SS+G+    S   D  + I+  D      
Sbjct: 68  RVKVLDVTKENKLKLRNTFTGHSLGVVSVDVSSDGEVIA-SSSLDSGLCIWKAD-SGQLL 125

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPV 353
            +++       + ++SP    I+  S      ++ +        +++   +   +     
Sbjct: 126 NQISLGPVDLWTVAFSPCDKYIISGSHEG---KISLYSVESGKPEQVLDPQNGKFTLSIA 182

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKD 411
           +SP G  IA     G    I +      +    +E   +   +  +SP  + L+ +    
Sbjct: 183 YSPDGKYIASGAIDG---IINIFDVAAGKVAQTLEGHAMSVRSLCFSPDSQMLLTASD-- 237

Query: 412 GDTGSKLYSI 421
            D   KLY +
Sbjct: 238 -DGHMKLYDV 246


>gi|150007362|ref|YP_001302105.1| putative alanyl dipeptidyl peptidase [Parabacteroides distasonis
           ATCC 8503]
 gi|256839653|ref|ZP_05545162.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|149935786|gb|ABR42483.1| putative alanyl dipeptidyl peptidase [Parabacteroides distasonis
           ATCC 8503]
 gi|256738583|gb|EEU51908.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 830

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 88/271 (32%), Gaps = 37/271 (13%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKV 226
            ++G    R+L  ++ +     ++ +   D + G   +      D  + +   S + + +
Sbjct: 303 PKEGTDLIRVLEPADRIPGFRDRSFIWRYDLKTGLYEQLTFGHTDTYIND--ISADSRYL 360

Query: 227 AYATYD------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            ++T D            +Y +D +             +  A  FS +GK+ L++   D 
Sbjct: 361 LFSTSDRVYTSLPHSRNSLYKLDLQTMAIDTIWEKAPYVNQA-AFSPDGKQLLVAGAGD- 418

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
                + D      ++        IS SY  D              QL++          
Sbjct: 419 -----AFDGIGRNIKQ------GQISNSY--DG-------------QLFLYDLASRKASP 452

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           +++D   +  D VW+     I       +   I        + + +    ++        
Sbjct: 453 LTKDFNPNVIDAVWNRFNGQIYILCEDEDYQRIYTCDPANGKIKQVAASEDIIMSYALAD 512

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              ++F   +     ++LY+ DL G    L+
Sbjct: 513 NAPVLFYYGQSASNANRLYAYDLKGGKNRLV 543



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/373 (9%), Positives = 104/373 (27%), Gaps = 65/373 (17%)

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           L +   V G +   G       F ++ V D+      +    P  ++ +   ++ +    
Sbjct: 101 LNSDRYVKGTLDISGPG----AFEVF-VNDKPVGASSELVMEPRRYQVVVKYLTAETDTC 155

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
               K  F S       + ++   + +L            +   +D        SPN + 
Sbjct: 156 PPSLKATFKSEAEAKVVASLNPEKRYTLL----------NILEGKDFQGV--SVSPNGKY 203

Query: 226 -VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +        +               + +      +   ++     R   +    +  ++
Sbjct: 204 ALVKYVNRFPESKSESYGQLMDAATGRVLLQDGGFLTTAKWMPKSNRLYYTRTGLDGTEL 263

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----------------- 327
            +VD  +     L   L       ++PD S +++  + EG ++                 
Sbjct: 264 VTVDPSTYQQTVLVPNL-PKGRFVFTPDESTLLYTVEEEGPKEGTDLIRVLEPADRIPGF 322

Query: 328 -----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-------AFTKFSGEKFAIGV 375
                ++         ++++     +Y +   S     +        +T     + ++  
Sbjct: 323 RDRSFIWRYDLKTGLYEQLTFGHTDTYIN-DISADSRYLLFSTSDRVYTSLPHSRNSLYK 381

Query: 376 MKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFS---------------RKKDGDTGSKLY 419
           +         +  +   +    +SP G+ L+ +                +       +L+
Sbjct: 382 LDLQTMAIDTIWEKAPYVNQAAFSPDGKQLLVAGAGDAFDGIGRNIKQGQISNSYDGQLF 441

Query: 420 SIDLNGRNETLIN 432
             DL  R  + + 
Sbjct: 442 LYDLASRKASPLT 454


>gi|330995905|ref|ZP_08319800.1| peptidase, S9A/B/C family, catalytic domain protein [Paraprevotella
           xylaniphila YIT 11841]
 gi|329574244|gb|EGG55819.1| peptidase, S9A/B/C family, catalytic domain protein [Paraprevotella
           xylaniphila YIT 11841]
          Length = 762

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 92/292 (31%), Gaps = 48/292 (16%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR---FSPNQQ 224
            EKG     ++       + I  +++ V DRDG + R L+       +      +SP+ +
Sbjct: 171 DEKGAA--PVVSPDGKRQAYIKNDNVYVSDRDGRHERALSNDGTAGNYYSSWLKWSPDGR 228

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            V            VY +++      + I + +       ++  G               
Sbjct: 229 YVCANKIRPAQKRYVYYVESSPKSQLQPILHQQE------YAKPGDELRF-------KVP 275

Query: 285 YSVDLQSNAT----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              ++++         L +  +      +  D   + FE +  G +   V++ +    K 
Sbjct: 276 CIFNVETGQAVIPSTELFDRQYDLYGPEWKEDGKAVTFEYNERGHKTYRVLELDAETGKV 335

Query: 341 ISQDKEASYFDPVWSP-------QGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSN- 391
            +  +E+S     +S         G  + +         + ++  + G   R + +    
Sbjct: 336 RTLVEESSPTFVNYSRMFRHVLKGGKEMIWMSERDNWNHLYMIDLEKGKVARQITKGEWV 395

Query: 392 -------LQAPTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLIN 432
                   +        + + F+      K+       Y I+++G+  T + 
Sbjct: 396 VRRVLKVDE------DNQVIYFTASGVNPKEDPYHVHYYKINMDGKQMTCLT 441


>gi|294505918|ref|YP_003569976.1| Conserved hypothetical protein, probable TolB periplasmic receptor
           [Salinibacter ruber M8]
 gi|294342246|emb|CBH23024.1| Conserved hypothetical protein, probable TolB periplasmic receptor
           [Salinibacter ruber M8]
          Length = 339

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 70/207 (33%), Gaps = 12/207 (5%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           DT     P  +         P F  +G   + +   D   D+Y           +T+T  
Sbjct: 89  DTLRMGRPTPVTTRPGYDNQPAFLPDGSGLVWTAIHDGQADVYRKIEDEGGPAPVTDTPE 148

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S +  P  +  +   + +G+++L+  +++G+    +  D + S     W     +  
Sbjct: 149 SEFSPTPRPGGALTLVRVEADGRQRLWRYRADGTPDAPVLPDAD-SVGYHAWLDSSRVAL 207

Query: 363 FTKFSGEKFAIGVMK--KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           F   +     +  +K   D    R +   S    P     GR+ +   +   D+   ++ 
Sbjct: 208 FVLGAPPTLHVANVKSGTDTVVARRI-GRSLQSVP-----GRADVSFVQVGPDSSVAIHR 261

Query: 421 ID---LNGRNETLINTPAYASDPQWVG 444
           +D   L  R  T   T A   D  W  
Sbjct: 262 LDGASLTTRRLTEAPTNAPTGDHAWTP 288



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 58/199 (29%), Gaps = 11/199 (5%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
               +R     +P F P+   + +    D             +  P  + +      +P 
Sbjct: 97  TPVTTRPGYDNQPAFLPDGSGLVWTAIHDGQAD--VYRKIEDEGGPAPVTDTPESEFSPT 154

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
               G   L+ V+ D    ++           +          ++   S   +F      
Sbjct: 155 PRPGGALTLVRVEADGRQRLWRYRADGTPDAPVLPDADSVGYHAWLDSSRVALFVL--GA 212

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              L+V          +++    S       P    ++F    G   ++ + + DG+   
Sbjct: 213 PPTLHVANVKSGTDTVVARRIGRSLQSV---PGRADVSFV-QVGPDSSVAIHRLDGAS-- 266

Query: 385 LLVEDSNLQAPTWSPSGRS 403
            L      +APT +P+G  
Sbjct: 267 -LTTRRLTEAPTNAPTGDH 284


>gi|261248957|emb|CBG26814.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
          Length = 408

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 51/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
            A              RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GAESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGRIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGRIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 404



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        RID    R  N  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGRIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|115970074|ref|XP_001184588.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 627

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 80/221 (36%), Gaps = 16/221 (7%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +       ++  +FSP+  K+A  + D   I+   + +T   +  K +      +   
Sbjct: 320 HQVLHDHCDEVWYCKFSPDGTKLATGSKDMTVIIWDVIKETLEIKKKKTLEGHAFGVSFL 379

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S + +  ++   +D + +++  + ++   +   +    +   SAS++ D  + V    
Sbjct: 380 AWSPDSRYLIVCGPED-SSELWVWNAETGEVKTKMSQSPEDCLTSASWNSDCRRFVTGGT 438

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG- 380
           R    Q Y    +G+    +   +            G  +     +     I     D  
Sbjct: 439 RG---QFYQCDLDGN---VLDTWEGVRVQCLCMKKDGKTVL---AADTHHRIRAYNFDDL 489

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + + +L ED ++ + T S + R  + S    G     L+ I
Sbjct: 490 TDQHVLQEDHSIMSFTISSNERQALLSVAYQG---VHLWDI 527


>gi|115676749|ref|XP_784365.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 619

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 80/221 (36%), Gaps = 16/221 (7%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +       ++  +FSP+  K+A  + D   I+   + +T   +  K +      +   
Sbjct: 320 HQVLHDHCDEVWYCKFSPDGTKLATGSKDMTVIIWDVIKETLEIKKKKTLEGHAFGVSFL 379

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S + +  ++   +D + +++  + ++   +   +    +   SAS++ D  + V    
Sbjct: 380 AWSPDSRYLIVCGPED-SSELWVWNAETGEVKTKMSQSPEDCLTSASWNSDCRRFVTGGT 438

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG- 380
           R    Q Y    +G+    +   +            G  +     +     I     D  
Sbjct: 439 RG---QFYQCDLDGN---VLDTWEGVRVQCLCMKKDGKTVL---AADTHHRIRAYNFDDL 489

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + + +L ED ++ + T S + R  + S    G     L+ I
Sbjct: 490 TDQHVLQEDHSIMSFTISSNERQALLSVAYQG---VHLWDI 527


>gi|114570656|ref|YP_757336.1| peptidase S9B dipeptidylpeptidase IV subunit [Maricaulis maris
           MCS10]
 gi|114341118|gb|ABI66398.1| dipeptidyl-peptidase IV, Serine peptidase, MEROPS family S09B
           [Maricaulis maris MCS10]
          Length = 751

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 45/231 (19%), Positives = 73/231 (31%), Gaps = 57/231 (24%)

Query: 203 IRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           I  L  S       PR   FSP+  +V +    D+D   + L    ID   +      S 
Sbjct: 37  IERLHASPSLTGATPRSLTFSPDGSRVTFLRAKDDDASVLDLWAMDIDG-GEPYLLVDSQ 95

Query: 260 ILAPR--------------------------FSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +LAP                           + S G+  L+ +  D    ++ VD+ +  
Sbjct: 96  VLAPDERELTEAERQLRERARISSTGIVRYDWDSQGEAILVPLDGD----VFHVDVATGQ 151

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             RL  T      A  SP  + + F  +    + LYV+     ++  I+ +        +
Sbjct: 152 ARRLMETPEYETDARISPRGNFVSFVRE----QNLYVIDLESGEETAITSEGGGLVSFGM 207

Query: 354 ----------------WSPQGDLIAFTKFSGEKF-AIGVMK--KDGSQERL 385
                           WSP    IA  +        I  M+   DGS   +
Sbjct: 208 AEFVAQEELGRRTGYWWSPDEQYIALARVDESPVDNIQRMEIGADGSARVV 258



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 55/165 (33%), Gaps = 37/165 (22%)

Query: 300 TLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQ-------------KRIS- 342
           T     S ++SPD S++ F     D      L+ M  +G +              + ++ 
Sbjct: 47  TGATPRSLTFSPDGSRVTFLRAKDDDASVLDLWAMDIDGGEPYLLVDSQVLAPDERELTE 106

Query: 343 ---------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                    +          W  QG+ I      G+ F +        Q R L+E    +
Sbjct: 107 AERQLRERARISSTGIVRYDWDSQGEAIL-VPLDGDVFHV---DVATGQARRLMETPEYE 162

Query: 394 -APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                SP G  + F R+++      LY IDL    ET I +    
Sbjct: 163 TDARISPRGNFVSFVREQN------LYVIDLESGEETAITSEGGG 201



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 85/242 (35%), Gaps = 36/242 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP++Q +A A  D+  +  +  M+   D + + +          R+   G    I   
Sbjct: 223 WWSPDEQYIALARVDESPVDNIQRMEIGADGSARVVDQ--------RYPRAGTDNAIV-- 272

Query: 278 KDEAMDIYSVDLQSNATERL----TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                +++  +  +    ++    T+ +++    +++ DS+    +     ++QL ++ +
Sbjct: 273 -----ELFIAERATGTRRQVELAQTDDIYL-ARVNWASDSATAYVQVLNRMQDQLTILTA 326

Query: 334 NGSDQKRISQDKEASYFDPVWS------PQGDLIAFTKFSGEKF-AIGVMKKDGSQERLL 386
           + +  +      E +      +        G ++  ++ +   F  I     DGS    +
Sbjct: 327 DPATGEAAPWLVENTDIWINLTNDFRALSDGTVLWTSEDTPGGFRHIQHRAADGSLINQV 386

Query: 387 VED----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                   ++ +         + F+   +      +YS+ L+G       T     D +W
Sbjct: 387 TSGDWVVGSINSVDM--DNSLVYFTGWIETPLERHIYSVPLDGSAAPTRITSG---DGRW 441

Query: 443 VG 444
             
Sbjct: 442 SA 443


>gi|21224792|ref|NP_630571.1| acyl-peptide hydrolase [Streptomyces coelicolor A3(2)]
 gi|289767928|ref|ZP_06527306.1| acyl-peptide hydrolase [Streptomyces lividans TK24]
 gi|4154083|emb|CAA22736.1| putative acyl-peptide hydrolase [Streptomyces coelicolor A3(2)]
 gi|289698127|gb|EFD65556.1| acyl-peptide hydrolase [Streptomyces lividans TK24]
          Length = 655

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 95/292 (32%), Gaps = 54/292 (18%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN------IRYLTPSRDQIL 214
            I      E+G+    +   +    + + +  + V   DG+       +R L P R + +
Sbjct: 131 WIEPDPRPERGEVWCVLEEFTGEGPTDVRRVPVAV-PLDGSAADDRGAVRELAPERHRFV 189

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             PR SP+ ++ A+  +D   +                               +G   ++
Sbjct: 190 TGPRLSPDGRRAAWLAWDHPRMPW-----------------------------DGTELIV 220

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +    E     +  +     E +         A ++PD + +++ SDR G   LY    +
Sbjct: 221 AEVGPEGTFQAARTVAGGPEESI-------AQADWAPDGT-LLYASDRTGWWNLYR---D 269

Query: 335 GSD--QKRISQDKEASYFDPVW-SP-QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           G     +              W +P    LIA     G    +G++  +  +        
Sbjct: 270 GRPLCPREEEFGGPLWKLGQRWFAPLDSGLIAVLHGRGAA-VLGILDPETGEVVDAAGPW 328

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQ 441
              AP  +  G  +  +      +G ++  +D       +I  P   A+DP+
Sbjct: 329 TEFAPALAAHGERVA-AVGASPRSGYEVVELDARTGRARVIGAPHEDATDPE 379


>gi|315608966|ref|ZP_07883938.1| dipeptidyl-peptidase IV [Prevotella buccae ATCC 33574]
 gi|315249346|gb|EFU29363.1| dipeptidyl-peptidase IV [Prevotella buccae ATCC 33574]
          Length = 738

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 51/153 (33%), Gaps = 24/153 (15%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             ++ A  S D  QIV  S + G+++  +     ++ + I                G  +
Sbjct: 54  GTDLYAQVSADGRQIVSRSFKTGRQRAVLFDVAATEGEHIDAFDGYEMDRQ-----GRQL 108

Query: 362 AFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                +   +                +   L E    Q P +SP GR + F R       
Sbjct: 109 LIRTRTEAVYRRSYKAEFYRYDIATRRLSKLSEGGPQQVPAFSPDGRKIAFVRD------ 162

Query: 416 SKLYSIDLNGRNETLINTPAYASD-----PQWV 443
           + L+ +  +G +E  + T    ++     P WV
Sbjct: 163 NNLFVV-ADG-HERQVTTDGRFNEIINGIPDWV 193



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 56/396 (14%), Positives = 109/396 (27%), Gaps = 73/396 (18%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
           A   +TG +       L  +       D +QI+ + F +     R +   ++    + I 
Sbjct: 42  APAYITG-INPIAGTDLYAQVS----ADGRQIVSRSFKTGR--QRAVLFDVAATEGEHID 94

Query: 168 GEKGDFNSR----ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              G    R    +L  + +               D A  R    S       P FSP+ 
Sbjct: 95  AFDGYEMDRQGRQLLIRTRTEAVYRRSYKAEFYRYDIATRRLSKLSEGGPQQVPAFSPDG 154

Query: 224 QKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNF-----RSMILAPRFSSNGKRAL 273
           +K+A+   ++     +   R    D R +     I ++          A  F+++G R  
Sbjct: 155 RKIAFVRDNNLFVVADGHERQVTTDGRFNEIINGIPDWVNEEEFGFNRAFAFNADGTRLC 214

Query: 274 I---------------------------------------SVQKDEAMDIYSVDLQSNAT 294
                                                   +   +  +  +S DL S   
Sbjct: 215 WLRYDESRVKTYALQLFKGECPEREALADYPGEYSYKYPKAGYDNSVVSAWSCDLGSGEV 274

Query: 295 ERLTNTLFIN-ISASY--SPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            RL   L  +        + DS  + V+  +R             +   R+   +    +
Sbjct: 275 RRLQVPLAADGYMPRIKATADSRAMIVYTMNRHQDTLCLYRADPVTGLSRLLISESVPRY 334

Query: 351 DPVWSPQG-----DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP-SGRS- 403
               + +G       I           + +   +G   R  VE  +           R  
Sbjct: 335 VKEEAMEGITVLDRHILVPSDRDGYMHLYLYDMEGRLLRQ-VERGDYDVTAVCGFDERRG 393

Query: 404 -LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            + +   +      ++Y    +GR E L +     S
Sbjct: 394 DVYYQAARLNAHDRQVYVTRADGRTERLTDREGNNS 429



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 69/463 (14%), Positives = 140/463 (30%), Gaps = 102/463 (22%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKV-ATNSANYSPVSIAFTKFVSIDELGGKVS----EV 68
           K    +   L+ G         + +    S   +P  I     ++  +L  +VS    ++
Sbjct: 9   KFLTLMCATLLAGTSAAREQGRLDLQTITSGELAPAYITGINPIAGTDLYAQVSADGRQI 68

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           VS+  + +     +  D    +  + D+   ++     G Q+L+  R     +   + EF
Sbjct: 69  VSRSFK-TGRQRAVLFDVAATEGEHIDAFDGYEMDRQ-GRQLLIRTRTEAVYRRSYKAEF 126

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
             +D+  R+  + K     P          S D              +I FV        
Sbjct: 127 YRYDIATRR--LSKLSEGGPQQVPA----FSPD------------GRKIAFV-------- 160

Query: 189 IKNSLCVMDRDGANIRYLTPSR--DQILFEPRFSP--------------NQQKVAYATYD 232
             N+L V+  DG   +  T  R  + I   P +                +  ++ +  YD
Sbjct: 161 RDNNLFVV-ADGHERQVTTDGRFNEIINGIPDWVNEEEFGFNRAFAFNADGTRLCWLRYD 219

Query: 233 DEDILRVYLMDTRIDRAPKR--IGNFRS------------MILAPRFSSN---G--KRAL 273
            E  ++ Y +       P+R  + ++                +   +S +   G  +R  
Sbjct: 220 -ESRVKTYALQLFKGECPEREALADYPGEYSYKYPKAGYDNSVVSAWSCDLGSGEVRRLQ 278

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD--------------------- 312
           + +  D  M        S A    T     +    Y  D                     
Sbjct: 279 VPLAADGYMPRIKATADSRAMIVYTMNRHQDTLCLYRADPVTGLSRLLISESVPRYVKEE 338

Query: 313 --------SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF- 363
                      I+  SDR+G   LY+    G   +++ +          +  +   + + 
Sbjct: 339 AMEGITVLDRHILVPSDRDGYMHLYLYDMEGRLLRQVERGDYDVTAVCGFDERRGDVYYQ 398

Query: 364 -TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             + +     + V + DG  ER L +     +  +S   R  +
Sbjct: 399 AARLNAHDRQVYVTRADGRTER-LTDREGNNSAVFSADLRYFV 440



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 35/241 (14%), Positives = 72/241 (29%), Gaps = 49/241 (20%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           A Y        Y  D    R  K        +  P FS +G++      +D  + +    
Sbjct: 116 AVYRRSYKAEFYRYDIATRRLSKLSEGGPQQV--PAFSPDGRKIAFV--RDNNLFV---- 167

Query: 289 LQSNATERLTNTL------------------FINISASYSPDSSQIVFESDREGKEQLYV 330
           +      ++T                       N + +++ D +++ +    E + + Y 
Sbjct: 168 VADGHERQVTTDGRFNEIINGIPDWVNEEEFGFNRAFAFNADGTRLCWLRYDESRVKTYA 227

Query: 331 MQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL- 385
           +Q    +    +       E SY  P             +     +         + R  
Sbjct: 228 LQLFKGECPEREALADYPGEYSYKYPK----------AGYDNSVVSAWSCDLGSGEVRRL 277

Query: 386 ---LVEDSNLQAPTWSPSGR-SLIFSRKKDGDTGSKLYSID-LNGRNETLI--NTPAYAS 438
              L  D  +     +   R  ++++  +  DT   LY  D + G +  LI  + P Y  
Sbjct: 278 QVPLAADGYMPRIKATADSRAMIVYTMNRHQDTLC-LYRADPVTGLSRLLISESVPRYVK 336

Query: 439 D 439
           +
Sbjct: 337 E 337


>gi|218901368|ref|YP_002449202.1| putative prolyl oligopeptidase family protein [Bacillus cereus
           AH820]
 gi|218538413|gb|ACK90811.1| putative prolyl oligopeptidase family protein [Bacillus cereus
           AH820]
          Length = 654

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 9/100 (9%)

Query: 354 WSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  G  +AF K +        +  + + +KD G    L   D +   P WSP  +S+ +
Sbjct: 25  ISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIAY 84

Query: 407 -SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            S   DGD  ++++   L+  ++  + +     S+ +W  
Sbjct: 85  LSSGGDGDMKNQIFVKSLDDYSKVKITDEKEGISNFKWDP 124



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 71/225 (31%), Gaps = 21/225 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     +       + P +S + K   
Sbjct: 24  NISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIA 83

Query: 274 ISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                 +      I+   L   +  ++T+      +  + P      + +  +  E++  
Sbjct: 84  YLSSGGDGDMKNQIFVKSLDDYSKVKITDEKEGISNFKWDPTGKGFYYITQSKECEEIKK 143

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLLVED 389
            +    D + + ++ + +    +     ++    +   E+  I GV +  G       +D
Sbjct: 144 RKELYGDFQHVGKEHQNNCLCYI-----EMEKVIQNDKEEREINGVYQLTGG------KD 192

Query: 390 SNLQAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNETLIN 432
             +     S +G+ ++       +      LY +D+  R    +N
Sbjct: 193 FYIHGFDISDNGKKVVCMATPSLNDHMNGDLYILDVEARELQQMN 237



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 100/307 (32%), Gaps = 60/307 (19%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV  +        +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 32  VAFVKRTANWEDNTYRNHVWIYEKD-KGKSYPLTTGDIDSIHPLWSPDSKSIAYLSSGGD 90

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
             ++  +    +D   K +I + +  I   ++   GK      Q                
Sbjct: 91  GDMKNQIFVKSLDDYSKVKITDEKEGISNFKWDPTGKGFYYITQSKECEEIKKRKELYGD 150

Query: 278 ------KDEAMDIYSVDLQS-----------NATERLTNTLFINISAS-YSPDSSQIVFE 319
                 + +   +  ++++            N   +LT      I     S +  ++V  
Sbjct: 151 FQHVGKEHQNNCLCYIEMEKVIQNDKEEREINGVYQLTGGKDFYIHGFDISDNGKKVVCM 210

Query: 320 SDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           +     +     LY++     + ++++ DK        +SP+G+ I ++           
Sbjct: 211 ATPSLNDHMNGDLYILDVEARELQQMNVDKLLG-GSACFSPEGNKICYSASIREKEYYRN 269

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I  M   G   + L    +   P  W+  G  + +       T   +  +  
Sbjct: 270 HIQESTLEIYDMNT-GEVIQPLTNFDSTVMPLQWTAKGILIRW----QDKTNYFIGLLAE 324

Query: 424 NGRNETL 430
           +G  ETL
Sbjct: 325 DGTVETL 331


>gi|49183200|ref|YP_026452.1| prolyl oligopeptidase family protein [Bacillus anthracis str.
           Sterne]
 gi|49177127|gb|AAT52503.1| prolyl oligopeptidase family protein, putative [Bacillus anthracis
           str. Sterne]
          Length = 655

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 9/100 (9%)

Query: 354 WSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  G  +AF K +        +  + + +KD G    L   D +   P WSP  +S+ +
Sbjct: 26  ISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIAY 85

Query: 407 -SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            S   DGD  ++++   L+  ++  + +     S+ +W  
Sbjct: 86  LSSGGDGDMKNQIFVKSLDDYSKVKITDEKEGISNFKWDP 125



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 71/225 (31%), Gaps = 21/225 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     +       + P +S + K   
Sbjct: 25  NISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIA 84

Query: 274 ISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                 +      I+   L   +  ++T+      +  + P      + +  +  E++  
Sbjct: 85  YLSSGGDGDMKNQIFVKSLDDYSKVKITDEKEGISNFKWDPTGKGFYYITQSKECEEIKK 144

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLLVED 389
            +    D + + ++ + +    +     ++    +   E+  I GV +  G       +D
Sbjct: 145 RKELYGDFQHVGKEHQNNCLCYI-----EMEKVIQNDKEEREINGVYQLTGG------KD 193

Query: 390 SNLQAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNETLIN 432
             +     S +G+ ++       +      LY +D+  R    +N
Sbjct: 194 FYIHGFDISDNGKKVVCMATPSLNDHMNGDLYILDVEARELQQMN 238



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 101/307 (32%), Gaps = 60/307 (19%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV  +        +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 33  VAFVKRTANWEDNTYRNHVWIYEKD-KGKSYPLTTGDIDSIHPLWSPDSKSIAYLSSGGD 91

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
             ++  +    +D   K +I + +  I   ++   GK      Q                
Sbjct: 92  GDMKNQIFVKSLDDYSKVKITDEKEGISNFKWDPTGKGFYYITQSKECEEIKKRKELYGD 151

Query: 278 ------KDEAMDIYSVDLQS-----------NATERLTNTLFINISAS-YSPDSSQIVFE 319
                 + +   +  ++++            N   +LT      I     S +  ++V  
Sbjct: 152 FQHVGKEHQNNCLCYIEMEKVIQNDKEEREINGVYQLTGGKDFYIHGFDISDNGKKVVCM 211

Query: 320 SDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           +     +     LY++     + ++++ DK        +SP+G+ I ++           
Sbjct: 212 ATPSLNDHMNGDLYILDVEARELQQMNVDKLLG-GSACFSPEGNKICYSASIREKEYYRN 270

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I  M   G   + L    ++  P  W+  G  + +       T   +  +  
Sbjct: 271 HIQESTLEIYDMNT-GEVIQPLTNFDSMVMPLQWTAKGILIRW----QDKTNYFIGLLAE 325

Query: 424 NGRNETL 430
           +G  ETL
Sbjct: 326 DGTVETL 332


>gi|30260353|ref|NP_842730.1| prolyl oligopeptidase family protein, putative [Bacillus anthracis
           str. Ames]
 gi|47525423|ref|YP_016772.1| prolyl oligopeptidase family protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|65317608|ref|ZP_00390567.1| COG1506: Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
           [Bacillus anthracis str. A2012]
 gi|165871544|ref|ZP_02216190.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. A0488]
 gi|167634164|ref|ZP_02392486.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. A0442]
 gi|167640326|ref|ZP_02398591.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. A0193]
 gi|170687741|ref|ZP_02878956.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. A0465]
 gi|170707845|ref|ZP_02898295.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. A0389]
 gi|177653419|ref|ZP_02935629.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. A0174]
 gi|190567353|ref|ZP_03020267.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227812838|ref|YP_002812847.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. CDC 684]
 gi|229604012|ref|YP_002864812.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. A0248]
 gi|254686512|ref|ZP_05150371.1| prolyl oligopeptidase family protein, putative [Bacillus anthracis
           str. CNEVA-9066]
 gi|254723647|ref|ZP_05185434.1| prolyl oligopeptidase family protein, putative [Bacillus anthracis
           str. A1055]
 gi|254735013|ref|ZP_05192725.1| prolyl oligopeptidase family protein, putative [Bacillus anthracis
           str. Western North America USA6153]
 gi|254739793|ref|ZP_05197486.1| prolyl oligopeptidase family protein, putative [Bacillus anthracis
           str. Kruger B]
 gi|254754829|ref|ZP_05206864.1| prolyl oligopeptidase family protein, putative [Bacillus anthracis
           str. Vollum]
 gi|254756878|ref|ZP_05208906.1| prolyl oligopeptidase family protein, putative [Bacillus anthracis
           str. Australia 94]
 gi|30253674|gb|AAP24216.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. Ames]
 gi|47500571|gb|AAT29247.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|164712648|gb|EDR18179.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. A0488]
 gi|167511728|gb|EDR87109.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. A0193]
 gi|167530478|gb|EDR93193.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. A0442]
 gi|170127203|gb|EDS96080.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. A0389]
 gi|170668268|gb|EDT19016.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. A0465]
 gi|172081459|gb|EDT66532.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. A0174]
 gi|190561480|gb|EDV15451.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227006644|gb|ACP16387.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. CDC 684]
 gi|229268420|gb|ACQ50057.1| putative prolyl oligopeptidase family protein [Bacillus anthracis
           str. A0248]
          Length = 654

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 9/100 (9%)

Query: 354 WSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  G  +AF K +        +  + + +KD G    L   D +   P WSP  +S+ +
Sbjct: 25  ISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIAY 84

Query: 407 -SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            S   DGD  ++++   L+  ++  + +     S+ +W  
Sbjct: 85  LSSGGDGDMKNQIFVKSLDDYSKVKITDEKEGISNFKWDP 124



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 71/225 (31%), Gaps = 21/225 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     +       + P +S + K   
Sbjct: 24  NISDDGKNVAFVKRTANWEDNTYRNHVWIYEKDKGKSYPLTTGDIDSIHPLWSPDSKSIA 83

Query: 274 ISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                 +      I+   L   +  ++T+      +  + P      + +  +  E++  
Sbjct: 84  YLSSGGDGDMKNQIFVKSLDDYSKVKITDEKEGISNFKWDPTGKGFYYITQSKECEEIKK 143

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLLVED 389
            +    D + + ++ + +    +     ++    +   E+  I GV +  G       +D
Sbjct: 144 RKELYGDFQHVGKEHQNNCLCYI-----EMEKVIQNDKEEREINGVYQLTGG------KD 192

Query: 390 SNLQAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNETLIN 432
             +     S +G+ ++       +      LY +D+  R    +N
Sbjct: 193 FYIHGFDISDNGKKVVCMATPSLNDHMNGDLYILDVEARELQQMN 237



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 101/307 (32%), Gaps = 60/307 (19%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV  +        +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 32  VAFVKRTANWEDNTYRNHVWIYEKD-KGKSYPLTTGDIDSIHPLWSPDSKSIAYLSSGGD 90

Query: 235 DILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
             ++  +    +D   K +I + +  I   ++   GK      Q                
Sbjct: 91  GDMKNQIFVKSLDDYSKVKITDEKEGISNFKWDPTGKGFYYITQSKECEEIKKRKELYGD 150

Query: 278 ------KDEAMDIYSVDLQS-----------NATERLTNTLFINISAS-YSPDSSQIVFE 319
                 + +   +  ++++            N   +LT      I     S +  ++V  
Sbjct: 151 FQHVGKEHQNNCLCYIEMEKVIQNDKEEREINGVYQLTGGKDFYIHGFDISDNGKKVVCM 210

Query: 320 SDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           +     +     LY++     + ++++ DK        +SP+G+ I ++           
Sbjct: 211 ATPSLNDHMNGDLYILDVEARELQQMNVDKLLG-GSACFSPEGNKICYSASIREKEYYRN 269

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I  M   G   + L    ++  P  W+  G  + +       T   +  +  
Sbjct: 270 HIQESTLEIYDMNT-GEVIQPLTNFDSMVMPLQWTAKGILIRW----QDKTNYFIGLLAE 324

Query: 424 NGRNETL 430
           +G  ETL
Sbjct: 325 DGTVETL 331


>gi|256784047|ref|ZP_05522478.1| acyl-peptide hydrolase [Streptomyces lividans TK24]
          Length = 651

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 95/292 (32%), Gaps = 54/292 (18%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN------IRYLTPSRDQIL 214
            I      E+G+    +   +    + + +  + V   DG+       +R L P R + +
Sbjct: 127 WIEPDPRPERGEVWCVLEEFTGEGPTDVRRVPVAV-PLDGSAADDRGAVRELAPERHRFV 185

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             PR SP+ ++ A+  +D   +                               +G   ++
Sbjct: 186 TGPRLSPDGRRAAWLAWDHPRMPW-----------------------------DGTELIV 216

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +    E     +  +     E +         A ++PD + +++ SDR G   LY    +
Sbjct: 217 AEVGPEGTFQAARTVAGGPEESI-------AQADWAPDGT-LLYASDRTGWWNLYR---D 265

Query: 335 GSD--QKRISQDKEASYFDPVW-SP-QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           G     +              W +P    LIA     G    +G++  +  +        
Sbjct: 266 GRPLCPREEEFGGPLWKLGQRWFAPLDSGLIAVLHGRGAA-VLGILDPETGEVVDAAGPW 324

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQ 441
              AP  +  G  +  +      +G ++  +D       +I  P   A+DP+
Sbjct: 325 TEFAPALAAHGERVA-AVGASPRSGYEVVELDARTGRARVIGAPHEDATDPE 375


>gi|213579706|ref|ZP_03361532.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 257

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 104 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 163

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 164 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGKIDFLTAR 219

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 220 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 257



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 144 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 201

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 202 --RIACCDAQSGKIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 253



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 128 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 187

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        +ID    R  N  S   A  FS +G+      + 
Sbjct: 188 WHPSGKWLGLVL--ENRIACCDAQSGKIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 244

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 245 KGFRQLWV 252


>gi|158321847|ref|YP_001514354.1| peptidase S9 prolyl oligopeptidase [Alkaliphilus oremlandii OhILAs]
 gi|158142046|gb|ABW20358.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Alkaliphilus oremlandii OhILAs]
          Length = 673

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 84/250 (33%), Gaps = 59/250 (23%)

Query: 218 RFSPNQQKVAYA-----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             S + + VA+        D++ +  V+L +    +    +         P +S N +  
Sbjct: 24  NISEDGKNVAFVKRTANWKDNKYVNHVWLYEKDKGQCY-PLTAEDIESTCPLWSPNSRDI 82

Query: 273 LI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----------- 320
              S+  ++   I+   + S ++ ++T+         + P      + S           
Sbjct: 83  AYLSLGHNKKNQIFVRSMDSYSSIQITDEEEGVSKFKWEPTGKGFYYVSQSKESEAIRKR 142

Query: 321 -DREGKEQ----------LYVM---------------QSNG--------SDQKRISQDKE 346
            +R G  Q          LY +                S+G        S   ++++DK+
Sbjct: 143 KERYGDFQHIGKEYQNNCLYYIEIEKLIQKDTYENLENSDGLAKDQHKNSAVHQLTEDKD 202

Query: 347 ASYFDPVWSPQGDLIAFT---KFSGEKF---AIGVMKKDGSQERLLVEDSNLQ-APTWSP 399
               +   S  G  IAF      +GE +    + ++     + + L  D  L+ +  +SP
Sbjct: 203 FHIHEFDISNDGKKIAFIAAPSPNGEDYMNRELYILDIKAGRLQKLTIDKLLRGSVCFSP 262

Query: 400 SGRSLIFSRK 409
            G  + ++  
Sbjct: 263 EGTKICYAAS 272



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 71/171 (41%), Gaps = 19/171 (11%)

Query: 266 SSNGKRALISVQKDEA------MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S++GK+                 ++Y +D+++   ++LT    +  S  +SP+ ++I + 
Sbjct: 211 SNDGKKIAFIAAPSPNGEDYMNRELYILDIKAGRLQKLTIDKLLRGSVCFSPEGTKICYA 270

Query: 320 SDREGKE---------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +  + K+          L +   +  DQ +     +++     W+ +G  I         
Sbjct: 271 ASIKEKDYYKTHIEESTLEIYDIHSGDQMQPLTGFDSTVTPLRWTAKG--ILIRWQDKTN 328

Query: 371 FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + IG++ ++G+ E L  + D      + +  G  + +++    +T  ++Y 
Sbjct: 329 YLIGLLSENGTVEVLSGKADGFTMDASITRDGNHISYNKAMANET-FEIYL 378



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 78/219 (35%), Gaps = 24/219 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-----LRVYLMDTRIDRAPKRIGNFR 257
           +  LT  +D  + E   S + +K+A+      +        +Y++D +  R  +++   +
Sbjct: 194 VHQLTEDKDFHIHEFDISNDGKKIAFIAAPSPNGEDYMNRELYILDIKAGRL-QKLTIDK 252

Query: 258 SMILAPRFSSNGKRALISVQ---KD------EAMDIYSVDLQSN-ATERLTNTLFINISA 307
            +  +  FS  G +   +     KD      E   +   D+ S    + LT         
Sbjct: 253 LLRGSVCFSPEGTKICYAASIKEKDYYKTHIEESTLEIYDIHSGDQMQPLTGFDSTVTPL 312

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-F 366
            ++      +    ++    L  + S     + +S   +    D   +  G+ I++ K  
Sbjct: 313 RWTAKG---ILIRWQDKTNYLIGLLSENGTVEVLSGKADGFTMDASITRDGNHISYNKAM 369

Query: 367 SGEKFAIGVMKKDGSQERLLVED---SNLQAPTW-SPSG 401
           + E F I +  K  + E    E    S  +  +W S  G
Sbjct: 370 ANETFEIYLDHKKITNENSFFEGKLKSKKEIISWQSSDG 408



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 8/92 (8%)

Query: 348 SYFDPVWSPQGDLIAFTKFS----GEKF--AIGVMKKDGSQERLLV-EDSNLQAPTWSPS 400
           +  D   S  G  +AF K +      K+   + + +KD  Q   L  ED     P WSP+
Sbjct: 19  TLSDTNISEDGKNVAFVKRTANWKDNKYVNHVWLYEKDKGQCYPLTAEDIESTCPLWSPN 78

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            R + +          +++   ++  +   I 
Sbjct: 79  SRDIAYLSLGHNKKN-QIFVRSMDSYSSIQIT 109


>gi|127511510|ref|YP_001092707.1| peptidase S9 prolyl oligopeptidase [Shewanella loihica PV-4]
 gi|126636805|gb|ABO22448.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella loihica PV-4]
          Length = 828

 Score = 56.6 bits (135), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 90/226 (39%), Gaps = 13/226 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++  +A    ++           +  R  + + ++     A ++ +   +  I ++  + 
Sbjct: 339 DEDVLASVKAENAKAKGETYKSEKSPRKVQLMQDWGWTQSAMQWQAKDNKVAIMLEAVDN 398

Query: 282 MDIY--SVDLQSNATE---RLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQS 333
            D +  +++L+S + +   RL +  ++N + +   + P S  + + S+  G   LY +++
Sbjct: 399 KDRWIATLNLKSGSLKTEHRLHDDAWVNYNFNQFGWLPQSDTLYYLSEETGYSHLY-LKA 457

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           +G+  + ++Q K     D    P+ + I +   K       +  +     Q   L +   
Sbjct: 458 SGAKPQALTQGKYV-VSDITLGPKAEYIYYKANKDHPGIDNVYRVNIADGQSEQLTQWDG 516

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               + SP G  L+    +     S+LY   + G  + L +  + A
Sbjct: 517 QLDYSLSPDGSKLLLKASRR-TQPSELYVQAIGGELKQLTHYTSDA 561



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 66/166 (39%), Gaps = 10/166 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P    + Y + +       +L        P+ +   + ++         +       K
Sbjct: 434 WLPQSDTLYYLSEETG---YSHLYLKASGAKPQALTQGKYVVSDITLGPKAEYIYYKANK 490

Query: 279 D--EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           D     ++Y V++    +E+LT     ++ S   SPD S+++ ++ R  +     +Q+ G
Sbjct: 491 DHPGIDNVYRVNIADGQSEQLTQWDGQLDYS--LSPDGSKLLLKASRRTQPSELYVQAIG 548

Query: 336 SDQKRISQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIGVMKKDG 380
            + K+++     ++    W +P+   +  T  +G+ +A  V    G
Sbjct: 549 GELKQLTHYTSDAFKQYAWQAPEVVKVPSTHGAGDVYA-RVYLPQG 593



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 38/104 (36%), Gaps = 4/104 (3%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           GA  + LT  +  ++ +    P  + + Y A  D   I  VY ++    ++ +       
Sbjct: 459 GAKPQALTQGK-YVVSDITLGPKAEYIYYKANKDHPGIDNVYRVNIADGQSEQLTQWDGQ 517

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +   S +G + L+   +        V       ++LT+   
Sbjct: 518 LDYS--LSPDGSKLLLKASRRTQPSELYVQAIGGELKQLTHYTS 559


>gi|302678001|ref|XP_003028683.1| hypothetical protein SCHCODRAFT_59767 [Schizophyllum commune H4-8]
 gi|300102372|gb|EFI93780.1| hypothetical protein SCHCODRAFT_59767 [Schizophyllum commune H4-8]
          Length = 545

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 53/249 (21%), Positives = 90/249 (36%), Gaps = 40/249 (16%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-----VVSGIIKNSLCVMD 197
           K+ ++ A  R+I   I D   +SI          I  +  S     +VSG    +  + D
Sbjct: 296 KYLATGAEDRQI--RIWDIAKKSIKHIFDGHQQEIYSLEFSYDGRLIVSGSGDKTARIWD 353

Query: 198 -RDGANIRYLTPSRDQILFEP-----RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +DG+N       +D +  +        SP+ + VA  + D      V + D       +
Sbjct: 354 MQDGSNKVLAINDQDSLNADAGVTSVAISPDGRLVAAGSLDT----AVRIWDVESGVLLE 409

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATER-------------- 296
           R+   R  + +  F+ +GK   IS   D+ +  + V  L   A  R              
Sbjct: 410 RLRGHRDSVYSVAFTPDGKGL-ISGSLDKTLKYWDVSGLARGAARRAPGRGGDEKNSLCT 468

Query: 297 --LTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              T      +S + SPD   +V  S DR     +    S  +  + + Q  + S     
Sbjct: 469 MNFTGHKDYVLSVAVSPDGQWVVSGSKDRG----VQFWDSRTAVVQCMLQGHKNSVISID 524

Query: 354 WSPQGDLIA 362
            SP G ++A
Sbjct: 525 LSPAGGMLA 533



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 63/216 (29%), Gaps = 30/216 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A    D     ++ + D             +  I +  FS +G R ++S   
Sbjct: 291 FSPDGKYLATGAEDR----QIRIWDIAKKSIKHIFDGHQQEIYSLEFSYDG-RLIVSGSG 345

Query: 279 DEAMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFESDREGKEQLYVMQS 333
           D+   I+ +   SN    + +   +N      S + SPD   +   S       + +   
Sbjct: 346 DKTARIWDMQDGSNKVLAINDQDSLNADAGVTSVAISPDGRLVAAGSL---DTAVRIWDV 402

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                    +    S +   ++P G  +             V        R        +
Sbjct: 403 ESGVLLERLRGHRDSVYSVAFTPDGKGLISGSLDKTLKYWDVSGLARGAARRAPGRGGDE 462

Query: 394 -----------------APTWSPSGRSLIFSRKKDG 412
                            +   SP G+ ++   K  G
Sbjct: 463 KNSLCTMNFTGHKDYVLSVAVSPDGQWVVSGSKDRG 498



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 63/192 (32%), Gaps = 27/192 (14%)

Query: 105 SLGAQVLVT-GRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHT-- 157
           SL A   VT   +  +G       L    R+WDV+    ++ ++      S   +A T  
Sbjct: 369 SLNADAGVTSVAISPDGRLVAAGSLDTAVRIWDVESG--VLLERLRGHRDSVYSVAFTPD 426

Query: 158 ----ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
               IS  + +++        +R          G  KNSLC M+  G             
Sbjct: 427 GKGLISGSLDKTLKYWDVSGLARGAARRAPGRGGDEKNSLCTMNFTG---------HKDY 477

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +     SP+ Q V   + D      V   D+R       +   ++ +++   S  G    
Sbjct: 478 VLSVAVSPDGQWVVSGSKDRG----VQFWDSRTAVVQCMLQGHKNSVISIDLSPAGGMLA 533

Query: 274 ISVQKDEAMDIY 285
            +   D    I 
Sbjct: 534 -TGSGDWHARIC 544


>gi|149642967|ref|NP_001092501.1| WD repeat-containing protein 51B [Bos taurus]
 gi|148745052|gb|AAI42495.1| WDR51B protein [Bos taurus]
 gi|296487980|gb|DAA30093.1| POC1 centriolar protein homolog B [Bos taurus]
          Length = 478

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 89/254 (35%), Gaps = 12/254 (4%)

Query: 160 DDIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           D + +          + + F      + +G     L +         +       ++   
Sbjct: 7   DPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSV 66

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FSP    +A A+ D    +R+++ D R   +  +       + +  FS++G+    S  
Sbjct: 67  QFSPLGNLLASASRD--RTIRLWIPDKRGKSSEFKAHTAP--VRSVDFSADGQFLA-SAS 121

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D+++ ++++  Q      L         A +SPD   IV  S+    + + +  +    
Sbjct: 122 EDKSIKVWNMYRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSE---DKTIKIWDTTNKQ 177

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 D         ++P G  IA +  S     I  ++ +   +   V    +   ++
Sbjct: 178 CVNNFSDFVGFANFVAFNPNGTCIA-SAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSF 236

Query: 398 SPSGRSLIFSRKKD 411
            PSG  LI +    
Sbjct: 237 HPSGNYLITASSDG 250



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 57/179 (31%), Gaps = 17/179 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     S+ V +       Y        +   +FSP+ + +   + D      + + DT 
Sbjct: 119 SASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK----TIKIWDTT 174

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +      +F        F+ NG     S   D  + I+ + +      +L     ++ 
Sbjct: 175 NKQCVNNFSDFVGFANFVAFNPNGTCIA-SAGSDHTVKIWDIRVN-----KLLQHYQVHS 228

Query: 306 SA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S+ P  + ++  +  +G   L ++           Q      F   +S  G+L
Sbjct: 229 GGVNCVSFHPSGNYLI-TASSDGT--LKILDLLEGRLIYTLQGHTGPVFTVSFSKGGEL 284


>gi|45768550|gb|AAH67651.1| Taf5 protein [Danio rerio]
          Length = 745

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 22/200 (11%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS---NATERL 297
           +MD +     K +      +    FS +    L S  +D  + ++S+   +         
Sbjct: 472 IMDEKTSSESKILHGHSGPVYGVSFSPDRNYLL-SSSEDGTIRLWSLQTFTCLVGYKGH- 529

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSP 356
            N    +    +SP      F S   G +++  + + +     RI     A      + P
Sbjct: 530 -NYPVWDTQ--FSPFG--YYFVS--GGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHP 582

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG--- 412
             + +A T  S     +  +  +G+  R+       + +  +SP+G+ L  S   DG   
Sbjct: 583 NSNYVA-TGSSDRTVRLWDV-LNGNCVRIFTGHKGPIHSLAFSPNGKFLA-SGSTDGRVL 639

Query: 413 --DTGSKLYSIDLNGRNETL 430
             D G  L   +L G   T+
Sbjct: 640 LWDIGHGLMIAELKGHTGTI 659



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 82/258 (31%), Gaps = 30/258 (11%)

Query: 142 KKFFSSPASWRK--------IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII---- 189
           + +  +P   RK        +    SDD+ + I  EK    S+IL      V G+     
Sbjct: 440 RVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPD 499

Query: 190 KNSLCVMDRDG----ANIRYLT-----PSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +N L     DG     +++  T        +  +++ +FSP      Y            
Sbjct: 500 RNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSP----FGYYFVSGGHDRVAR 555

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L  T   +  +      + +   RF  N      +   D  + ++ V L  N     T  
Sbjct: 556 LWATDHYQPLRIFAGHLADVTCTRFHPNSNYVA-TGSSDRTVRLWDV-LNGNCVRIFTGH 613

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SP+     F +      ++ +            +    + +   +S  G++
Sbjct: 614 KGPIHSLAFSPNGK---FLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEI 670

Query: 361 IAFTKFSGEKFAIGVMKK 378
           IA            VM+ 
Sbjct: 671 IASGSIDNTVRLWDVMRA 688



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 71/219 (32%), Gaps = 24/219 (10%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD   ++   +       ++   FSP++  +  ++ D    +R++ + T       + 
Sbjct: 471 RIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSED--GTIRLWSLQTFTCLVGYKG 528

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            N+   +   +FS  G    +S   D    +++ D            L       + P+S
Sbjct: 529 HNYP--VWDTQFSPFG-YYFVSGGHDRVARLWATDH-YQPLRIFAGHLADVTCTRFHPNS 584

Query: 314 SQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--- 369
           + +    SDR     + +      +  RI    +       +SP G  +A     G    
Sbjct: 585 NYVATGSSDRT----VRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLL 640

Query: 370 ---KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 + + +  G           + A  +S  G  + 
Sbjct: 641 WDIGHGLMIAELKG-------HTGTIYALKFSRDGEIIA 672



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 13/165 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 530 NYPVWDT----QFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 585

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A  + D     RV L 
Sbjct: 586 YVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDG----RVLLW 641

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           D         +      I A +FS +G+    S   D  + ++ V
Sbjct: 642 DIGHGLMIAELKGHTGTIYALKFSRDGEIIA-SGSIDNTVRLWDV 685


>gi|309791673|ref|ZP_07686165.1| Peptidase C14, caspase catalytic subunit p20 [Oscillochloris
            trichoides DG6]
 gi|308226295|gb|EFO80031.1| Peptidase C14, caspase catalytic subunit p20 [Oscillochloris
            trichoides DG6]
          Length = 1615

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/289 (14%), Positives = 92/289 (31%), Gaps = 64/289 (22%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               DQ +     SP+   +      +       ++    +     +     +I + RFS 
Sbjct: 869  DGTDQQVESVALSPDGNALLLTPVRNTPNANSAILWDLRNTRTISLTVDADLIYSARFSP 928

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDR-- 322
            + ++ + +   D    I+  +LQ          T  + +   A +  D   +V +SD   
Sbjct: 929  DSQKIV-TTDNDGWARIW--NLQGQQITAFPPFTVGMALYQDAYFIADDQILVLDSDYGA 985

Query: 323  ---------------EGKEQLYVMQSNGSDQKRISQDKEA-------------------- 347
                             +++++ + ++   Q  ++  ++                     
Sbjct: 986  HIFAIGQPTPITSFLGHQQRIWAVAASSDQQHLLTSGRDGVAILWDLRGQQIATIAPSSA 1045

Query: 348  ------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPS 400
                    +  V+SP G  I      G      +    G +        S ++   +SP 
Sbjct: 1046 DSLAYSYAWQAVFSPDGQHILTPAPDG---VARLWDLTGREVMRFSGYTSPIRYICFSPD 1102

Query: 401  GRSLIFSRKKDGDTGSKLYSIDLNGRNET------LINTPAYASDPQWV 443
            G+S++ S +   D   +L+  DL G+         L  T  ++ D Q +
Sbjct: 1103 GQSILTSAE---DGMVRLW--DLTGKELQSFAHDSLAVTAIFSPDGQQI 1146



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 90/271 (33%), Gaps = 60/271 (22%)

Query: 198  RDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYD------------------------ 232
             D  N R ++ + D  +++  RFSP+ QK+     D                        
Sbjct: 904  WDLRNTRTISLTVDADLIYSARFSPDSQKIVTTDNDGWARIWNLQGQQITAFPPFTVGMA 963

Query: 233  -DEDILRV-----------YLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQ 277
              +D   +           Y         P  I +F      I A   SS+ +  L S  
Sbjct: 964  LYQDAYFIADDQILVLDSDYGAHIFAIGQPTPITSFLGHQQRIWAVAASSDQQHLLTSG- 1022

Query: 278  KDEAMDIYSVDLQSNATERLTNTLF------INISASYSPDSSQIVFESDREGKEQLYVM 331
            +D    ++  DL+      +  +            A +SPD   I+     +G  +L+  
Sbjct: 1023 RDGVAILW--DLRGQQIATIAPSSADSLAYSYAWQAVFSPDGQHIL-TPAPDGVARLW-- 1077

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
               G +  R S       +   +SP G  I  +   G    + +    G + +    DS 
Sbjct: 1078 DLTGREVMRFSGYTSPIRYIC-FSPDGQSILTSAEDG---MVRLWDLTGKELQSFAHDSL 1133

Query: 392  LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                 +SP G+ ++ +  +      +L+++D
Sbjct: 1134 AVTAIFSPDGQQILTAAGQ----WLRLWTLD 1160



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 57/356 (16%), Positives = 105/356 (29%), Gaps = 85/356 (23%)

Query: 63   GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
              +S  V  DL  S  F+  SQ                              +++    D
Sbjct: 910  RTISLTVDADLIYSARFSPDSQ------------------------------KIVTTDND 939

Query: 123  RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
                  R+W+++ ++      F    A ++  A+ I+DD    +  + G     I   + 
Sbjct: 940  GWA---RIWNLQGQQITAFPPFTVGMALYQD-AYFIADDQILVLDSDYGAHIFAIGQPTP 995

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
                   +  +  +         LT  RD +     +    Q++A       D L     
Sbjct: 996  ITSFLGHQQRIWAVAASSDQQHLLTSGRDGVAIL--WDLRGQQIATIAPSSADSL----- 1048

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                           S      FS +G+  L +   D    ++  DL      R +    
Sbjct: 1049 -------------AYSYAWQAVFSPDGQHIL-TPAPDGVARLW--DLTGREVMRFSGYTS 1092

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                  +SPD   I+  S  +G  +L+     G + +  S   ++     ++SP G  I 
Sbjct: 1093 PIRYICFSPDGQSIL-TSAEDGMVRLW--DLTGKELQ--SFAHDSLAVTAIFSPDGQQI- 1146

Query: 363  FTKFSGEKFAIGVMKKDGSQERLL----------------VEDSNLQAPTWSPSGR 402
                +     + +   DG   R+L                 E    +  +W   GR
Sbjct: 1147 ---LTAAGQWLRLWTLDG---RILHAWNAHAQDIETAVFSSETDLHRIVSWGRDGR 1196



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 82/223 (36%), Gaps = 64/223 (28%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             D A+I  L P  + I     FS + + +   ++ D + +R++  D ++      +    
Sbjct: 1240 ADHASISLLHPISNAI-----FSADGRYLL--SHADGEPVRLWTTDGQLHAN---LDLQS 1289

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              +L+   S +G+  L +               +  T +L           +  D+S   
Sbjct: 1290 EAVLSMALSPDGQTILTT---------------TGKTAQL-----------WHADASLSA 1323

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              S   G   L  +  +G    +++          +W+ QG+LIA               
Sbjct: 1324 TLSHPTGNITLVALDPHG----QMALTAGDDAVPLLWNMQGELIA--------------- 1364

Query: 378  KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                  +L+   +++   ++SP+G+ ++ +     D  ++L+S
Sbjct: 1365 ------KLIGHTNSIAHASFSPNGQYILTTAN---DATARLWS 1398


>gi|119496327|ref|XP_001264937.1| chromosome segregation protein (SepB), putative [Neosartorya
           fischeri NRRL 181]
 gi|119413099|gb|EAW23040.1| chromosome segregation protein (SepB), putative [Neosartorya
           fischeri NRRL 181]
          Length = 840

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 47/267 (17%), Positives = 87/267 (32%), Gaps = 23/267 (8%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                +  D N  ++  ++S + G    ++         +  L       + +   S + 
Sbjct: 50  PKTIDDGVDGNLGVVATNDSFIMGAEDGTVWKYGIGSGRMEQLLVRCALPVRDLAISKDG 109

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + VA A+    D L V +++       K +           F  NG+   +S   D  + 
Sbjct: 110 EWVAVAS----DELTVKIVNIEDMTKVKYLREQAKGTKHVSFDPNGRYIAVSCT-DGLLY 164

Query: 284 IYS--------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           IYS        V        RL          ++ PD +   F +    ++ +    S  
Sbjct: 165 IYSTFSEEPELVRKLDGVIRRLEAEDEATAEIAWHPDGT--AFAAAEVTRDIVIYSVSEW 222

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
             +K  S           WSP G L+A    +G    I + +    Q     + +N+   
Sbjct: 223 KKEKVFSGGHNGDITSVSWSPNGALLA---TAGADGKILIWETKTQQVLHRYDFANVINL 279

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSID 422
            W P+  SL F+         +L+  D
Sbjct: 280 AWHPTNNSLSFTTSDG-----ELFIYD 301


>gi|147919415|ref|YP_686846.1| hypothetical protein RCIX2434 [uncultured methanogenic archaeon
           RC-I]
 gi|110622242|emb|CAJ37520.1| hypothetical protein RCIX2434 [uncultured methanogenic archaeon
           RC-I]
          Length = 393

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 84/248 (33%), Gaps = 27/248 (10%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED---ILRVYLMD 243
            +  +S+ + D D  +   +TPS+      P    +   V Y   +      + R+++  
Sbjct: 163 DLGDSSIKLYDIDRKSSETITPSKQFPRAFPSIFDDY--VIYTGDEGGTNEVLGRIHIFS 220

Query: 244 TRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
               R    I +  ++ +A    PR    G   +         +I   D++S  ++  T 
Sbjct: 221 LYAHRMSDGIDSMWAVDIAEPHEPRG--EGNYLVWWTIDGTKKEIILHDIKSGKSQ--TI 276

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +         S D    V          +Y+        ++I         D      G 
Sbjct: 277 STDNCDHPRIS-DG---VVVYHNGADHHIYLYDIASGQTRKIVAIGRQYSADIS----GS 328

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGRSLIFSRKKDGDTGS- 416
            I +       + I +      +E  +  + + Q    SP   G ++I+   ++  TG+ 
Sbjct: 329 RIVYDDNRAGNWDIYMFDLSTGKETQITNEPHDQM---SPQIYGDTIIYMDNRNSPTGNW 385

Query: 417 KLYSIDLN 424
            +Y+I ++
Sbjct: 386 DIYTIKVS 393



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 59/194 (30%), Gaps = 37/194 (19%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS----- 209
           AH +SD I         D    +         G     +     DG     +        
Sbjct: 223 AHRMSDGI---------DSMWAVDIAEPHEPRGEGNYLVW-WTIDGTKKEIILHDIKSGK 272

Query: 210 ----RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                      PR S +        Y +     +YL D    +  K +   R      ++
Sbjct: 273 SQTISTDNCDHPRIS-DG----VVVYHNGADHHIYLYDIASGQTRKIVAIGR------QY 321

Query: 266 SSN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR- 322
           S++  G R +    +    DIY  DL +    ++TN     +S         I++  +R 
Sbjct: 322 SADISGSRIVYDDNRAGNWDIYMFDLSTGKETQITNEPHDQMSPQIY--GDTIIYMDNRN 379

Query: 323 --EGKEQLYVMQSN 334
              G   +Y ++ +
Sbjct: 380 SPTGNWDIYTIKVS 393


>gi|319901411|ref|YP_004161139.1| 6-phosphogluconolactonase [Bacteroides helcogenes P 36-108]
 gi|319416442|gb|ADV43553.1| 6-phosphogluconolactonase [Bacteroides helcogenes P 36-108]
          Length = 369

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 62/190 (32%), Gaps = 15/190 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALIS 275
           FSP+ + +    +  + ILR  L    I           +    PR   FS NGK A + 
Sbjct: 177 FSPDGKYIFATDFSADRILRFVLHPKDIIPHLSAETTDIAPGSGPRHLTFSPNGKYAYLI 236

Query: 276 VQKDEAMDIYSVDLQSNATERL----TNTLFINISA--SYSPDSSQIVFESDR---EGKE 326
            +    +  +S D  +   E++     +T+    SA    SPD   + + S+R   +G  
Sbjct: 237 TELSGKVIAFSYD--NGKLEQIQTITADTIAARGSADIHLSPDGKYL-YASNRLREDGIA 293

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
              V   NG+  K   Q           +P G  +           I          +  
Sbjct: 294 IFAVSPDNGTLAKAGYQPTGIHPRHFNITPNGKYLLAACRDSNTIQIYERNATTGLLKDT 353

Query: 387 VEDSNLQAPT 396
             +  +  P 
Sbjct: 354 HRNITVDKPV 363



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 79/217 (36%), Gaps = 31/217 (14%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM----D 283
           +A      ILR+   +  +   P  +       L   +S  G  ++  ++KD  +     
Sbjct: 95  FAFDKSTGILRLLNTEPTLGADPCYVATNGKEALTANYS-GGSMSVFPLRKDGTLGPVDT 153

Query: 284 IYSVDLQSN-ATERLTNTLFINISASYSPDSSQIV---FESDREGKEQLYVMQ------- 332
           ++           ++T  +   +   +SPD   I    F +DR  +  L+          
Sbjct: 154 LFIGSATGTDTIRQITAHIHCTV---FSPDGKYIFATDFSADRILRFVLHPKDIIPHLSA 210

Query: 333 -----SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                + GS  + ++      Y   +    G +IAF+  +G+   I  +  D    R   
Sbjct: 211 ETTDIAPGSGPRHLTFSPNGKYAYLITELSGKVIAFSYDNGKLEQIQTITADTIAAR--- 267

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +++     SP G+ L ++  +  + G  ++++  +
Sbjct: 268 GSADIHL---SPDGKYL-YASNRLREDGIAIFAVSPD 300



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 68/213 (31%), Gaps = 22/213 (10%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---ISVQKD 279
                +    D  +  V  +          I    + I    FS +GK       S  + 
Sbjct: 135 GSMSVFPLRKDGTLGPVDTLFIGSATGTDTIRQITAHIHCTVFSPDGKYIFATDFSADRI 194

Query: 280 EAMDIYSVDLQSNATERL---TNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQS 333
               ++  D+       L   T  +         ++SP+       ++  GK   +   +
Sbjct: 195 LRFVLHPKDI----IPHLSAETTDIAPGSGPRHLTFSPNGKYAYLITELSGKVIAFSYDN 250

Query: 334 NGSDQKR-ISQDKEASYFDPVW--SPQGDLI-AFTKFSGEKFAIGVMKKDGSQERLLVED 389
              +Q + I+ D  A+        SP G  + A  +   +  AI  +  D          
Sbjct: 251 GKLEQIQTITADTIAARGSADIHLSPDGKYLYASNRLREDGIAIFAVSPDNGTLAKAGYQ 310

Query: 390 SNLQAPT---WSPSGRSLIFSRKKDGDTGSKLY 419
                P     +P+G+ L+ +  +D +T  ++Y
Sbjct: 311 PTGIHPRHFNITPNGKYLL-AACRDSNT-IQIY 341


>gi|229496760|ref|ZP_04390471.1| dipeptidyl peptidase IV [Porphyromonas endodontalis ATCC 35406]
 gi|229316306|gb|EEN82228.1| dipeptidyl peptidase IV [Porphyromonas endodontalis ATCC 35406]
          Length = 738

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 76/220 (34%), Gaps = 24/220 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SPN  KVA+   D   +    L+D    +A +    +  M   P          + V  
Sbjct: 218 WSPNGSKVAFYRMDQSMVAPYPLVDITPHKAKEVPVRYP-MAGEPS-----HHVTLGVFD 271

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGS 336
                   +    +    LTN        ++ PD+  +       G+    +    +   
Sbjct: 272 RTTGQTVYMQTGGDPEHYLTNI-------AWDPDNRSLYIAEVNRGQNHNEVNRYDAQSG 324

Query: 337 DQKRISQDKEASYFDPVWSP-------QGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVE 388
            +      ++   +    SP        G  +  ++  G   F +G  +K  S +++   
Sbjct: 325 ARLATLFVEDDPKYIEPQSPMIFLPTNDGRYLWLSRKDGYNHFYLGSTRKANSLQQITRG 384

Query: 389 DSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           +  +     +S  G+++ F         ++LYSI +NG+N
Sbjct: 385 EWEVTEFKGFSQDGKTIFFEATAASPLETRLYSIGINGKN 424


>gi|168704501|ref|ZP_02736778.1| peptidase S9B, dipeptidylpeptidase IV-like protein [Gemmata
           obscuriglobus UQM 2246]
          Length = 1224

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/277 (14%), Positives = 79/277 (28%), Gaps = 56/277 (20%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT------YDDEDILRVYLMDTR 245
            + +   DG N        D       FSP+ ++VA+           E  L  + +   
Sbjct: 623 DIGIGYFDG-NPGARLTKSDGAKEHVTFSPDGKRVAFVRGANLFAVSVEKPLEEHKLTAD 681

Query: 246 IDR----------APKRIGNFRSMILAPRFSSNGKRALISVQKDEAM--DIYSVDLQ--S 291
                          + I N         +S +GK+    ++ D+A       VDLQ   
Sbjct: 682 GGGEVFNAKGDWVYEEEIFNRNGKAYW--WSPDGKQLAF-LRFDDAPVKKFNLVDLQPVG 738

Query: 292 NATERLTNTLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
              E        + +        S D  +  F            +   G   +  +    
Sbjct: 739 GRLESYAYPKPGDPNPLVKVGVVSADGGKPTF------------LDLGGYKPEE-TLISR 785

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDS------NLQAPTWSP 399
             +        G + A+ +   + +    V     ++ + L  ++      +   P W P
Sbjct: 786 VGWVGKS----GTVFAYVQNRTQTWLDFVVWDSPTAKPKTLFRETTQAWVDDAGEPRWLP 841

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            G  L F  ++ G     LY     G+    +    +
Sbjct: 842 DGTFL-FLSERTG--WKHLYHYSAEGKLLAAVTQGDW 875



 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 76/228 (33%), Gaps = 32/228 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP------KRIGNFRSMILAPRFSSNGKR 271
            +SP+ +++A+  +DD  + +  L+D +            + G+   ++     S++G +
Sbjct: 708 WWSPDGKQLAFLRFDDAPVKKFNLVDLQPVGGRLESYAYPKPGDPNPLVKVGVVSADGGK 767

Query: 272 ALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLY 329
                          +DL      E L + +            +   +  +R        
Sbjct: 768 PTF------------LDLGGYKPEETLISRVGW-----VGKSGTVFAYVQNRTQTWLDFV 810

Query: 330 VMQSNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           V  S  +  K + ++   ++ D    P W P G  +  ++ +G K  +     +G     
Sbjct: 811 VWDSPTAKPKTLFRETTQAWVDDAGEPRWLPDGTFLFLSERTGWK-HLYHYSAEGKLLAA 869

Query: 386 LVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           + +               +++ FS      TG+ L  +      E L 
Sbjct: 870 VTQGDWEVKDVLRVDAKEKTVYFSAALTSPTGTDLCRVTFGSDTELLT 917



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 53/144 (36%), Gaps = 16/144 (11%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV----MQSNGSDQKRI- 341
           +     +   LT   +I+           ++    R GK + +     ++S+    K + 
Sbjct: 535 MSAFGFSGTPLTTGAWIDGEHFLQVKDGVLLKVKARTGKGEPFTDPAKIKSSLDAIKGLD 594

Query: 342 --SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
             ++D+ A       SP     AF    G    IG    +    RL   D   +  T+SP
Sbjct: 595 NATRDRLAKGTSFRTSPD--RAAFLFDIGPDIGIGYFDGNPG-ARLTKSDGAKEHVTFSP 651

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL 423
            G+ + F R      G+ L+++ +
Sbjct: 652 DGKRVAFVR------GANLFAVSV 669


>gi|149185245|ref|ZP_01863562.1| prolyl oligopeptidase family protein [Erythrobacter sp. SD-21]
 gi|148831356|gb|EDL49790.1| prolyl oligopeptidase family protein [Erythrobacter sp. SD-21]
          Length = 702

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 43/117 (36%), Gaps = 13/117 (11%)

Query: 264 RFSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQ 315
            F+ +G     + ++           DI+  DL  +A   LT     +++  + SPD   
Sbjct: 248 AFAPDGSGIYFAAREAGAEEPHSVNFDIWWSDLSGSAPLNLTAANEALDLLPTPSPDGQF 307

Query: 316 IVFESD-REG----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + + +  R G    ++ + +          ++ D + S+    W+P    +  T   
Sbjct: 308 LAYVAMARPGYEADRQVVMLRDLKSGVTTALTGDFDRSFGSLAWTPDSRWLVATAQD 364



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 40/112 (35%), Gaps = 14/112 (12%)

Query: 308 SYSPDSSQIVFESDREG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +++PD S I F +   G          ++    +GS    ++   EA    P  SP G  
Sbjct: 248 AFAPDGSGIYFAAREAGAEEPHSVNFDIWWSDLSGSAPLNLTAANEALDLLPTPSPDGQF 307

Query: 361 IAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
           +A+   +   +      + +          L  D +    +  W+P  R L+
Sbjct: 308 LAYVAMARPGYEADRQVVMLRDLKSGVTTALTGDFDRSFGSLAWTPDSRWLV 359



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 57/158 (36%), Gaps = 6/158 (3%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRID 247
            +   D  G+    LT + + +   P  SP+ Q +AY          D   V L D +  
Sbjct: 274 DIWWSDLSGSAPLNLTAANEALDLLPTPSPDGQFLAYVAMARPGYEADRQVVMLRDLKSG 333

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS- 306
                 G+F     +  ++ + +  + + Q       + +D +S A E+L          
Sbjct: 334 VTTALTGDFDRSFGSLAWTPDSRWLVATAQDVLDTPAFRIDPRSGAVEKLDLMAGNEAHL 393

Query: 307 ASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            + +P  S  I+F  D  G      +  N    + ++Q
Sbjct: 394 GNLTPLSSGGILFTRDSIGAPAELFLSKNWGMAEPLTQ 431



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 46/151 (30%), Gaps = 12/151 (7%)

Query: 218 RFSPNQQKVAYATYDDEDI------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            F+P+   + +A  +            ++  D              ++ L P  S +G+ 
Sbjct: 248 AFAPDGSGIYFAAREAGAEEPHSVNFDIWWSDLSGSAPLNLTAANEALDLLPTPSPDGQF 307

Query: 272 ALISVQKDEAMD-----IYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGK 325
                      +     +   DL+S  T  LT     +  S +++PDS  +V  +     
Sbjct: 308 LAYVAMARPGYEADRQVVMLRDLKSGVTTALTGDFDRSFGSLAWTPDSRWLVATAQDVLD 367

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
              + +       +++             +P
Sbjct: 368 TPAFRIDPRSGAVEKLDLMAGNEAHLGNLTP 398



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 81/304 (26%), Gaps = 38/304 (12%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           ++      S     S  +  R  AN        D       F  +       +  D D  
Sbjct: 55  VYSVTMTDSESFARSSQLYLRSLANTEAKPAEIDLEGSGATFGGDGWLYYLTSNADSDST 114

Query: 238 RVYLMDTRIDRAPK---RIGNFRSMILAPRFSSNGKRALI---------SVQKDEAMDIY 285
           +V+      D +     ++ +    +     S  G R  I         ++  D++   Y
Sbjct: 115 QVWRARIGADGSVTGASQVTDIARGVNGFHVSDAGDRIAIWTDIARSCTAIDCDDSAKAY 174

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKR 340
           +            +  F +  A  +P +   VF          G                
Sbjct: 175 APGPGDGRLYNAEDGFFRHWDAWETPGTYSRVFAFPLENGVATGTGMAVDGPMGAGGPSG 234

Query: 341 ISQD-KEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLV--EDS 390
            +         D  ++P G  I F              F I      GS    L    ++
Sbjct: 235 DTPGAPFGGGEDIAFAPDGSGIYFAAREAGAEEPHSVNFDIWWSDLSGSAPLNLTAANEA 294

Query: 391 NLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSI----------DLNGRNETLINTPAYASD 439
               PT SP G+ L +    + G    +   +           L G  +    + A+  D
Sbjct: 295 LDLLPTPSPDGQFLAYVAMARPGYEADRQVVMLRDLKSGVTTALTGDFDRSFGSLAWTPD 354

Query: 440 PQWV 443
            +W+
Sbjct: 355 SRWL 358


>gi|82734212|ref|NP_001032508.1| transcription initiation factor TFIID subunit 5 [Danio rerio]
 gi|81294182|gb|AAI07957.1| TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated
           factor [Danio rerio]
 gi|125858090|gb|AAI29311.1| TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated
           factor [Danio rerio]
          Length = 743

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 22/200 (11%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS---NATERL 297
           +MD +     K +      +    FS +    L S  +D  + ++S+   +         
Sbjct: 470 IMDEKTSSESKILHGHSGPVYGVSFSPDRNYLL-SSSEDGTIRLWSLQTFTCLVGYKGH- 527

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSP 356
            N    +    +SP      F S   G +++  + + +     RI     A      + P
Sbjct: 528 -NYPVWDTQ--FSPFG--YYFVS--GGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHP 580

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG--- 412
             + +A T  S     +  +  +G+  R+       + +  +SP+G+ L  S   DG   
Sbjct: 581 NSNYVA-TGSSDRTVRLWDV-LNGNCVRIFTGHKGPIHSLAFSPNGKFLA-SGSTDGRVL 637

Query: 413 --DTGSKLYSIDLNGRNETL 430
             D G  L   +L G   T+
Sbjct: 638 LWDIGHGLMIAELKGHTGTI 657



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 82/258 (31%), Gaps = 30/258 (11%)

Query: 142 KKFFSSPASWRK--------IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII---- 189
           + +  +P   RK        +    SDD+ + I  EK    S+IL      V G+     
Sbjct: 438 RVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPD 497

Query: 190 KNSLCVMDRDG----ANIRYLT-----PSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +N L     DG     +++  T        +  +++ +FSP      Y            
Sbjct: 498 RNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSP----FGYYFVSGGHDRVAR 553

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L  T   +  +      + +   RF  N      +   D  + ++ V L  N     T  
Sbjct: 554 LWATDHYQPLRIFAGHLADVTCTRFHPNSNYVA-TGSSDRTVRLWDV-LNGNCVRIFTGH 611

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SP+     F +      ++ +            +    + +   +S  G++
Sbjct: 612 KGPIHSLAFSPNGK---FLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEI 668

Query: 361 IAFTKFSGEKFAIGVMKK 378
           IA            VM+ 
Sbjct: 669 IASGSIDNTVRLWDVMRA 686



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 71/219 (32%), Gaps = 24/219 (10%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD   ++   +       ++   FSP++  +  ++ D    +R++ + T       + 
Sbjct: 469 RIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSED--GTIRLWSLQTFTCLVGYKG 526

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            N+   +   +FS  G    +S   D    +++ D            L       + P+S
Sbjct: 527 HNYP--VWDTQFSPFG-YYFVSGGHDRVARLWATDH-YQPLRIFAGHLADVTCTRFHPNS 582

Query: 314 SQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--- 369
           + +    SDR     + +      +  RI    +       +SP G  +A     G    
Sbjct: 583 NYVATGSSDRT----VRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLL 638

Query: 370 ---KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 + + +  G           + A  +S  G  + 
Sbjct: 639 WDIGHGLMIAELKG-------HTGTIYALKFSRDGEIIA 670



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 13/165 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 528 NYPVWDT----QFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 583

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A  + D     RV L 
Sbjct: 584 YVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDG----RVLLW 639

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           D         +      I A +FS +G+    S   D  + ++ V
Sbjct: 640 DIGHGLMIAELKGHTGTIYALKFSRDGEIIA-SGSIDNTVRLWDV 683


>gi|332717164|ref|YP_004444630.1| Uncharacterized WD repeat-containing protein [Agrobacterium sp.
           H13-3]
 gi|325063849|gb|ADY67539.1| Uncharacterized WD repeat-containing protein [Agrobacterium sp.
           H13-3]
          Length = 330

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 91/270 (33%), Gaps = 30/270 (11%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +I H   D     I      +   +    +  V+  +  S  V   DG    +     ++
Sbjct: 71  RIGH---DGSLSEIANVPRKWVGVVAGGPQKAVAYGVGKSSFVRLSDGTVKEFK---EER 124

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +    F+P   ++A A Y+      V L        P  +  ++       FS +GK  
Sbjct: 125 TVEAIAFAPKGLRIAVARYNG-----VTLHWVASAGDPVDL-EWKGAHTGVTFSPDGKFL 178

Query: 273 LISVQKDEAMDIYSVDLQSNATE----RLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           + ++Q++ A+  + ++      E    R+T       S S+S     +       G    
Sbjct: 179 VTTMQEN-ALHGWKMEATKGGMEARHMRMTGYPAKVKSVSWSAKGKWLA----SSGAPAA 233

Query: 329 YVMQSNGSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            V   +G D       + +         +  + P  D++A     G    +GV   DG +
Sbjct: 234 IVWPFSGKDGPMGKAPEELGSRANIMATNVAFHPLEDVLAIGFIDG--MILGVRLADGKE 291

Query: 383 ERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
             L       +    WS +G+ L F+ +  
Sbjct: 292 ALLRRPGKGAITGMDWSATGKLLAFASEAG 321


>gi|228956602|ref|ZP_04118397.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228803083|gb|EEM49906.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 654

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 97/293 (33%), Gaps = 45/293 (15%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++      I +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 32  VAFVKKTADWKDNIYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDARCLAYLSPVGD 90

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-YSVDLQS-- 291
              ++++      R  + I + +  +   ++   GK      Q  +  +I    DL    
Sbjct: 91  GENQIFVKSLDGYREVQ-ITDEKEGVSTFKWGPTGKGLYYVTQSKQCEEIKKRKDLYGDF 149

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  +     +I I           V +SD +  E   V         +++  K+  
Sbjct: 150 QHIGKEHQNNYLYYIEIE---------KVIQSDTDEHENRVVY--------QLTDGKDFH 192

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNLQAPTWSPSG 401
             +   S  G  + F               + ++     + + L V+     +  +SP G
Sbjct: 193 IHEFDISNDGKKVVFMVTPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPEG 252

Query: 402 RSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
             + ++         R    D+  ++Y I+  G     +        P QW  
Sbjct: 253 SKICYTASIREKDYYRNHIQDSTLEIYDIN-TGEVIQPLTDFDSTVMPLQWTA 304


>gi|322612976|gb|EFY09928.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322619041|gb|EFY15928.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322625182|gb|EFY22009.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322630150|gb|EFY26923.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322634342|gb|EFY31077.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322635757|gb|EFY32466.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322642963|gb|EFY39542.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322644968|gb|EFY41499.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322648962|gb|EFY45406.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322654985|gb|EFY51299.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322661042|gb|EFY57270.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322662471|gb|EFY58684.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322667348|gb|EFY63514.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322674275|gb|EFY70368.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322678517|gb|EFY74578.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322681023|gb|EFY77057.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322687041|gb|EFY83014.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323193238|gb|EFZ78455.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198318|gb|EFZ83424.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323200936|gb|EFZ86006.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323206690|gb|EFZ91648.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323214012|gb|EFZ98778.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323216314|gb|EGA01042.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323220536|gb|EGA04990.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323225401|gb|EGA09635.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323228515|gb|EGA12646.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323234336|gb|EGA18424.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323238648|gb|EGA22704.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323244840|gb|EGA28844.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323245786|gb|EGA29776.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323251032|gb|EGA34908.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323257220|gb|EGA40919.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323262145|gb|EGA45706.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323264645|gb|EGA48149.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323268934|gb|EGA52392.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 408

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGRIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGRIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 404



 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        RID    R  N  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGRIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|182413662|ref|YP_001818728.1| WD40 domain-containing protein [Opitutus terrae PB90-1]
 gi|177840876|gb|ACB75128.1| WD40 domain protein beta Propeller [Opitutus terrae PB90-1]
          Length = 789

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 78/252 (30%), Gaps = 42/252 (16%)

Query: 215 FEPRFSPNQQKVAYATYDDED----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           F   FSP+ +   +A          IL  +L D +         +  S       S +G 
Sbjct: 51  FGASFSPDGRTFYFARALPPRGLPTILCSHLCDGQWTEPEIVPIDGASGEGDASLSPDGA 110

Query: 271 RALISVQKD---------EAMDIYSV---DLQSNATERL--TNTLFIN------ISASYS 310
           R     ++             D++     D +      +  T+T             S +
Sbjct: 111 RLFFWSRRTAPGKPAGSRPIPDLWFAEQRDGRFGPAHSVGETDTAAWTPLSLRFGGPSVA 170

Query: 311 PDSSQIVF--ESDREGKEQLYVMQSNGSDQKRISQDKEA-----SYFDPVWSPQGDLIAF 363
            D +   F   +   G  +L                 E        FDP  +P    + F
Sbjct: 171 ADGTLYAFRGAAATGGPPRLVRAPLVSGRYLAFEDLGEGLNANGGGFDPYVAPDQHYLVF 230

Query: 364 TKFSGEKF-----AIGVMKKDGS--QERLL----VEDSNLQAPTWSPSGRSLIFSRKKDG 412
           +    +        + +   DGS    R L      D+    P  SP GR L+F+R++ G
Sbjct: 231 SSDRADSHGNADLYLSLRAADGSWSIPRNLGPAVNSDAAEYEPAISPDGRLLVFTRERLG 290

Query: 413 DTGSKLYSIDLN 424
               ++ ++ L+
Sbjct: 291 IFVIEVRALGLD 302



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 80/248 (32%), Gaps = 36/248 (14%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DG--ANIRYLTPSRDQILFEP 217
           D + +     G     + F   S V    ++ +      DG  +  + +  S +   F+P
Sbjct: 360 DSFAATFTPDGA---TLYFCRSSGVRPDRRSRIMESHYADGRWSVPQPVPFSGEFNDFDP 416

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTR----IDRAPKRIGNFRSM---ILAPRFSSNGK 270
             SP+ +++ +A+   E   R  L           A + +G    M    + P  +++G 
Sbjct: 417 NLSPDGEQLFFASVRPESGPRPALWVVERTAAGWSAARSLGTIAGMDGVTVFPCPTASGN 476

Query: 271 RALIS-----VQKDEAMDIYS----VDLQSNATERLT---NTLFINISASYSPDSSQIVF 318
               +     +      DIY      D +    E L    N+ F +     +P+ S I+F
Sbjct: 477 -LYFAGHATGLASHGDDDIYVCRRHSDGRYGPPENLGPAVNSPFQDYDGYVAPNESFIIF 535

Query: 319 ESDREGK---EQLYVMQSNGSDQ-------KRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S R G       YV                 I+         P  SP      FT    
Sbjct: 536 CSRRPGGIGPSDFYVSTRENGGWSAARNLGPLINSASVRGVCCPSVSPDRRWFYFTSSRN 595

Query: 369 EKFAIGVM 376
           E+  I  +
Sbjct: 596 ERPGIYRI 603



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 69/222 (31%), Gaps = 35/222 (15%)

Query: 217 PRFSPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGK 270
           P  + +    A+    AT     ++R  L+  R           N       P  + +  
Sbjct: 167 PSVAADGTLYAFRGAAATGGPPRLVRAPLVSGRYLAFEDLGEGLNANGGGFDPYVAPDQH 226

Query: 271 RALISVQK---DEAMDIYS----VDLQSNATERLT---NTLFINISASYSPDSSQIVFES 320
             + S  +       D+Y      D   +    L    N+       + SPD   +VF  
Sbjct: 227 YLVFSSDRADSHGNADLYLSLRAADGSWSIPRNLGPAVNSDAAEYEPAISPDGRLLVFTR 286

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +R G   ++V++        +    EA+      SP+    A    +       ++    
Sbjct: 287 ERLG---IFVIEVR---ALGLDLSPEANKAARDVSPRAK--AVGNDTPATLRAELVGAAA 338

Query: 381 ------SQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKD 411
                   E  L E+  +  P     T++P G +L F R   
Sbjct: 339 CAGVRPPPEATLFEEGLISTPDSFAATFTPDGATLYFCRSSG 380


>gi|21233383|ref|NP_639300.1| dipeptidyl peptidase IV [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66770348|ref|YP_245110.1| dipeptidyl peptidase IV [Xanthomonas campestris pv. campestris str.
           8004]
 gi|21115220|gb|AAM43182.1| dipeptidyl peptidase IV [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66575680|gb|AAY51090.1| dipeptidyl peptidase IV [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 751

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 72/220 (32%), Gaps = 42/220 (19%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P     L +P+ +P+  +V +    D D  ++ L +  I     R+     ++L     
Sbjct: 41  LPLSGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWEYDIASGQTRLLVDSKVVL----- 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                            +   +      +R+     I +   ++PD+  ++F     G+ 
Sbjct: 96  ------------PGTETLSDAEKARRERQRIAAFAGI-VDYQWAPDAHALLFPL--GGEL 140

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            LY ++  GS   R     E    D   SP+G  ++F +       + V+     ++  L
Sbjct: 141 YLYDLRKTGSAAVRQLTHGEGFATDAKLSPKGGFVSFVRAR----NLWVIDLASGKQLQL 196

Query: 387 VEDS------------------NLQAPTWSPSGRSLIFSR 408
             D                         W+P   ++ F+R
Sbjct: 197 TRDGSDTIGNGVAEFVADEEMDRHTGYWWAPDDSAIAFAR 236



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 54/343 (15%), Positives = 104/343 (30%), Gaps = 69/343 (20%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQI----- 213
               + +T  +G      L      VS +   +L V+D   G  ++      D I     
Sbjct: 150 SAAVRQLTHGEGFATDAKLSPKGGFVSFVRARNLWVIDLASGKQLQLTRDGSDTIGNGVA 209

Query: 214 ----------LFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRS 258
                          ++P+   +A+A  D+          VY   T +           +
Sbjct: 210 EFVADEEMDRHTGYWWAPDDSAIAFARIDESAVPIQKRPEVYADHTEVIDQRYPQAGQPN 269

Query: 259 M-----ILAPRFSS---------------------NGKRALISVQKDE--AMDIYSVDLQ 290
           +     ++ PR S+                     + +R     Q  +   + +    L 
Sbjct: 270 VTVQLGVIVPRASATPQWIDLGKQADIYLARVDWRDAQRLTFQRQSRDQKTLQLIEATLA 329

Query: 291 SNATERLTNTLFINISASYSP---------DSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           S     L        S ++ P         D  + ++ S+R G E LYV   +G+    +
Sbjct: 330 SGKQRVLIT----ETSPTWVPLTNDLRFLKDG-RFLWNSERSGYEHLYVASEDGTTLTPL 384

Query: 342 SQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           +              Q  L+ F  +K S  +  I  +   G         +   A +++ 
Sbjct: 385 TSGAWVVDALLAVDEQAGLVYFAGSKDSPTQTHIYAVALGGGAIEKRSASNGTHAASFA- 443

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQ 441
           +  S+      +  T  ++     NG    TL+      +DPQ
Sbjct: 444 NNASVYVDTWSNTTTQPQIELFRANGEKIATLLQN--DVADPQ 484


>gi|328870827|gb|EGG19200.1| WD40 repeat-containing protein [Dictyostelium fasciculatum]
          Length = 517

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 70/217 (32%), Gaps = 21/217 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRI-- 253
              +Y      + +   +FSP+ + +  A+ D            ++ D  +    K++  
Sbjct: 21  YVAKYTLKGHKKAVSSVKFSPDGKWILSASADGIAKIWGAYDGKHVRDLAVAPPKKKVNK 80

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPD 312
             F   I    +S + K    +   D  + I+  D +     + L        + +++P 
Sbjct: 81  EQFTLGISDAAWSHDSKYIC-TGSDDGCIRIW--DAEKGEILKTLKGHNNFVFTVAFNPS 137

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S+ I   S     E + +            Q          ++  G L+  + + G    
Sbjct: 138 SNLIASGSF---DENIIIWDVKTGTALHTLQGHSEPVTSVQFNRDGSLLVSSSYDG---M 191

Query: 373 IGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI 405
           + +      Q    +       P     +SP+GR ++
Sbjct: 192 VRIWDPSTGQALQTLPTEPDPPPVSFAAFSPNGRYIL 228



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 65/190 (34%), Gaps = 18/190 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D       +      + +   +F+ +   +  ++YD   ++R++   T 
Sbjct: 143 SGSFDENIIIWDVKTGTALHTLQGHSEPVTSVQFNRDGSLLVSSSYD--GMVRIWDPSTG 200

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFI 303
                         +    FS NG+  L+  Q        ++ L ++  +++  T T   
Sbjct: 201 QALQTLPTEPDPPPVSFAAFSPNGRYILVGTQNS------TMKLWNHTEKKISKTYTEHT 254

Query: 304 NIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           N       ++S     +V  S+ +GK  +Y+        ++     E         P+  
Sbjct: 255 NTQFCIFGTFS-MGEWVVSGSE-DGK--IYIWNLQTRVVEQRLAGHEKEVLAVSCHPKES 310

Query: 360 LIAFTKFSGE 369
           +IA       
Sbjct: 311 IIASGSLDNT 320


>gi|218437076|ref|YP_002375405.1| hypothetical protein PCC7424_0064 [Cyanothece sp. PCC 7424]
 gi|218169804|gb|ACK68537.1| conserved hypothetical protein [Cyanothece sp. PCC 7424]
          Length = 500

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 80/217 (36%), Gaps = 26/217 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS----SNGKRAL 273
           + S   +++AY         + Y +  R  R   R GN     + P FS     +   A 
Sbjct: 91  KISWAGRRLAYTLNTPVPYGKTYQVHLRGAREKFREGNQSGQTVEPFFSQFTTRDRAFAY 150

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           I  Q +E   +   +L  N    LT    + +   + P+  +I+F + ++ +    + + 
Sbjct: 151 IGTQPNEQGQLILYNLTDNKKTILTPPNLVVMDFKFYPNGQKILFSAAQKSRGSFGIREL 210

Query: 334 N--------GSDQKR--------ISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIG 374
                      D K+        I  +K+        +  G+ +   + + E    F + 
Sbjct: 211 ELYTVETEIQGDSKQELLPKIELILDNKDYQNNQFDLASDGETVVVQRVNRENPADFDLW 270

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           ++K+    ERL     + +    +P G+++  ++ + 
Sbjct: 271 MVKEGSKPERLNAPGGDFK---ITPDGQAVAVAQGQG 304



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 88/257 (34%), Gaps = 35/257 (13%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F +R    +        +  L + +    N + +    + ++ + +F PN QK+ ++   
Sbjct: 141 FTTRDRAFAYIGTQPNEQGQLILYNLT-DNKKTILTPPNLVVMDFKFYPNGQKILFSAAQ 199

Query: 233 DEDI------LRVYLMDTRIDRAPKR---------IGNFRSMILAPRFSSNGKRALISVQ 277
                     L +Y ++T I    K+         + N          +S+G+  ++   
Sbjct: 200 KSRGSFGIRELELYTVETEIQGDSKQELLPKIELILDNKDYQNNQFDLASDGETVVVQRV 259

Query: 278 KDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             E     D++ V  + +  ERL N    +     +PD   +         + + ++   
Sbjct: 260 NRENPADFDLWMV-KEGSKPERL-NAPGGDF--KITPDGQAVA----VAQGQGIAIVPLK 311

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVE 388
              +      K        +S  G   A   F+ +         +  +   G Q+ LL  
Sbjct: 312 PDAEPLEFLPKFGQVL--SFSRDGSAAAMVNFNTDNANLRYIRSLYYVNNQGVQKELLKV 369

Query: 389 DSNLQAPTWSPSGRSLI 405
           + ++    ++P+G +L 
Sbjct: 370 EGSIINCQFNPNGTALY 386


>gi|20532278|sp|O54929|WSB2_MOUSE RecName: Full=WD repeat and SOCS box-containing protein 2;
           Short=WSB-2; AltName: Full=SOCS box-containing WD
           protein SWiP-2
 gi|2766493|gb|AAB96649.1| WSB-2 [Mus musculus]
          Length = 404

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 85/217 (39%), Gaps = 23/217 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D
Sbjct: 118 APDVSCLILATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRD 175

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + + I+ ++      + L+  L      S SPD S +       G++ +++         
Sbjct: 176 KTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLI 232

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---------- 389
           R  +  ++S     +SP   L+    +      I      G++ R L             
Sbjct: 233 RKLEGHQSSVVSCDFSPDSALLVTASYDTS--VIMWDPYTGARLRSLHHTQLEPTMDDSD 290

Query: 390 ---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              S+L++  +SP G   ++      D   ++++++L
Sbjct: 291 VHMSSLRSVCFSPEG---LYLATVADDRLLRIWALEL 324



 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 29/247 (11%), Positives = 70/247 (28%), Gaps = 41/247 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT--------------------YDDEDILRVY 240
                         +   FSP+    A++                     ++ +      
Sbjct: 16  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCVVKLVPWPLEEQFIPKGFEAKSRSSKN 75

Query: 241 LMDTRIDRAPKRI---GNFRSMILAPRFSSNGKR---------------ALISVQKDEAM 282
               R     K +        +  +P  S   ++                L +   D  +
Sbjct: 76  DPKGRGSLKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQAPDVSCLILATGLNDGQI 135

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 136 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 194

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 195 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 252

Query: 403 SLIFSRK 409
            L+ +  
Sbjct: 253 LLVTASY 259


>gi|303236572|ref|ZP_07323154.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           disiens FB035-09AN]
 gi|302483225|gb|EFL46238.1| peptidase, S9A/B/C family, catalytic domain protein [Prevotella
           disiens FB035-09AN]
          Length = 725

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 54/154 (35%), Gaps = 24/154 (15%)

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              +  A  S D  +IV  S   GKE   +   N ++ ++I Q +         S  G  
Sbjct: 40  KGTSDYAQISDDWKRIVTFSFVTGKETGVLFDVNKTNGEKIKQIESY-----EISDNGQF 94

Query: 361 IAFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           I     +   +         +        + L      Q PT+SP+G+ + F R+     
Sbjct: 95  ILIQTQTKRIYRRSFTAEFYLYNVKDKSLKKLSTGGAQQIPTFSPNGKYIAFVRQ----- 149

Query: 415 GSKLYSIDLNGRNETLINTPAYASD-----PQWV 443
            + ++  D  G  E  + T    ++     P WV
Sbjct: 150 -NNVFITD--GTTEKQVTTDGKFNEIINGLPDWV 180


>gi|197247916|ref|YP_002148749.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197211619|gb|ACH49016.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
          Length = 408

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGRIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGRIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 404



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        RID    R  N  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGRIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|115437504|ref|XP_001217827.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114188642|gb|EAU30342.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 760

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 13/158 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  ++  +FS +  K+A           V + DT       ++      +    +S
Sbjct: 437 LSQHSDEVWYCQFSHDGTKLA----TAGKDHTVNIYDTSTFAVLHKLTEHDDGVAHVSWS 492

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREG 324
            +  +  I+  +D    ++SVD        LT  +      +A+++PD    V  S  + 
Sbjct: 493 PDDSKL-ITCSQDNKARVWSVD---TGLCLLTINHHQHPVTAAAWAPDGESFVTTSL-DL 547

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +Q+      G  Q+           D   +P G  + 
Sbjct: 548 NKQMCHWSMRG--QRLYMWPAGFRVQDCAITPDGRRLI 583



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 10/143 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G +   +  KD  ++IY  D  +     +LT         S+SPD S+++  S   
Sbjct: 449 FSHDGTKLA-TAGKDHTVNIY--DTSTFAVLHKLTEHDDGVAHVSWSPDDSKLITCSQ-- 503

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQ 382
              +  V   +           +       W+P G+    T     ++     M+  G +
Sbjct: 504 -DNKARVWSVDTGLCLLTINHHQHPVTAAAWAPDGESFVTTSLDLNKQMCHWSMR--GQR 560

Query: 383 ERLLVEDSNLQAPTWSPSGRSLI 405
             +      +Q    +P GR LI
Sbjct: 561 LYMWPAGFRVQDCAITPDGRRLI 583



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/205 (9%), Positives = 65/205 (31%), Gaps = 16/205 (7%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI-------YQSITGEKGD 172
             +RL +   L D   + QI    + ++ +     +  + D          +        
Sbjct: 388 PDNRLAI---LLDHVKQNQINQCLYHNTASPPSLYSDHMCDRSDFPLRTGVELSQHSDEV 444

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +  +       + +    +++ + D     + +     D  +    +SP+  K+   + D
Sbjct: 445 WYCQFSHDGTKLATAGKDHTVNIYDTSTFAVLHKLTEHDDGVAHVSWSPDDSKLITCSQD 504

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           ++      +           I + +  + A  ++ +G+   ++   D    +    ++  
Sbjct: 505 NK----ARVWSVDTGLCLLTINHHQHPVTAAAWAPDGES-FVTTSLDLNKQMCHWSMRGQ 559

Query: 293 ATERLTNTLFINISASYSPDSSQIV 317
                     +    + +PD  +++
Sbjct: 560 RLYMWPAGFRVQD-CAITPDGRRLI 583



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 65/220 (29%), Gaps = 35/220 (15%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFS-SNGKRALI---------------------SVQKD 279
            D  I  + +R+ +  S  ++P     + + A++                     S+  D
Sbjct: 362 WDGSIRFSRERLLSGLSKSISPSVMIPDNRLAILLDHVKQNQINQCLYHNTASPPSLYSD 421

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQ 338
              D     L++     L+          +S D +++       GK+  + +  ++    
Sbjct: 422 HMCDRSDFPLRTGVE--LSQHSDEVWYCQFSHDGTKLA----TAGKDHTVNIYDTSTFAV 475

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                + +       WSP    +       +   +  +        +      + A  W+
Sbjct: 476 LHKLTEHDDGVAHVSWSPDDSKLITCSQDNKA-RVWSVDTGLCLLTINHHQHPVTAAAWA 534

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           P G S + +           +S+    R + L   PA   
Sbjct: 535 PDGESFVTTSLDLNKQMCH-WSM----RGQRLYMWPAGFR 569


>gi|240273759|gb|EER37278.1| chromosome segregation protein [Ajellomyces capsulatus H143]
          Length = 849

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 84/250 (33%), Gaps = 25/250 (10%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   +   F+  +    + K  L     D   +R   P RD  L     S +   VA A+
Sbjct: 62  GIVATNDSFIMGAEDGTVWKYELETAQMDKLLVRCALPVRDLSL-----SKDGDWVAVAS 116

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               D L V +++       K + +    +    F  +G+   +S   D  + IYSVD  
Sbjct: 117 ----DELVVKIVNIHDMTIVKYLRDQSKGVKHVNFDPSGRYIAVSGS-DGIIYIYSVDGP 171

Query: 291 --------SNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
                        RL T+    +  A + PD+    F +    ++   V   + + Q   
Sbjct: 172 QPELVKKIDGIIGRLETDHEATSR-AVWHPDAK--AFAAVEPTRDIAIVSTRDWTKQNVF 228

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                A      WSP G L+A    +G    I + +          +  N+    W P  
Sbjct: 229 PAGHNADITALAWSPNGALLA---SAGADRQILLWETKTQNILRRYDIPNVINLAWHPVD 285

Query: 402 RSLIFSRKKD 411
            +L F+    
Sbjct: 286 NTLSFTTSDG 295


>gi|94967925|ref|YP_589973.1| hypothetical protein Acid345_0896 [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549975|gb|ABF39899.1| hypothetical protein Acid345_0896 [Candidatus Koribacter versatilis
           Ellin345]
          Length = 656

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 64/155 (41%), Gaps = 11/155 (7%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
              V+      ++ ++ +S    ++++        S + D+ Q+VF S   G  ++ +  
Sbjct: 508 AWLVENKGRHSLW-INDRSQTPVQVSSDDLDVYEFS-AADNGQLVF-SALTGHHRMELFV 564

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSN 391
            +    + +  +   +   P +SP G  +A+ KFS   + + + K D   ER L     N
Sbjct: 565 LSNGKPEPLHIE---NARFPAFSPDGRWLAYAKFSNSSWHLTLRKLDNGNERHLGTASCN 621

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              P W    ++LI++     D G  L+   L  R
Sbjct: 622 QAYPAWVRDSQTLIYAS----DCGRGLWQTTLESR 652



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/137 (13%), Positives = 49/137 (35%), Gaps = 8/137 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V    ++SL + DR    ++  +   D   F      +  ++ ++       + ++++  
Sbjct: 511 VENKGRHSLWINDRSQTPVQVSSDDLDVYEFSAA---DNGQLVFSALTGHHRMELFVL-- 565

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             +  P+ +         P FS +G+    +   + +  +    L +     L       
Sbjct: 566 -SNGKPEPL--HIENARFPAFSPDGRWLAYAKFSNSSWHLTLRKLDNGNERHLGTASCNQ 622

Query: 305 ISASYSPDSSQIVFESD 321
              ++  DS  +++ SD
Sbjct: 623 AYPAWVRDSQTLIYASD 639



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 62/141 (43%), Gaps = 12/141 (8%)

Query: 311 PDSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           P+ +  V  S +  EGK + + M  +G    ++ Q  E  +     +     +     + 
Sbjct: 458 PEGTIYVVTSPQLAEGKLRFHGMARDGWHWYQVDQKGEDMHIIEAPTKDTAWLV---ENK 514

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            + ++ +  +  +  ++  +D ++   + + +G+ L+FS    G    +L+ +  NG+ E
Sbjct: 515 GRHSLWINDRSQTPVQVSSDDLDVYEFSAADNGQ-LVFSALT-GHHRMELFVLS-NGKPE 571

Query: 429 TL----INTPAYASDPQWVGF 445
            L       PA++ D +W+ +
Sbjct: 572 PLHIENARFPAFSPDGRWLAY 592


>gi|62182304|ref|YP_218721.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161616926|ref|YP_001590891.1| hypothetical protein SPAB_04747 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|224585611|ref|YP_002639410.1| ATP/GTP-binding protein [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|62129937|gb|AAX67640.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|161366290|gb|ABX70058.1| hypothetical protein SPAB_04747 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|224470139|gb|ACN47969.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|322716795|gb|EFZ08366.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 408

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGRIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGRIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 404



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        RID    R  N  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGRIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|16767096|ref|NP_462711.1| cytoplasmic protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|16422383|gb|AAL22670.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|267996096|gb|ACY90981.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301160343|emb|CBW19868.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312914940|dbj|BAJ38914.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321226871|gb|EFX51921.1| hypothetical protein YidR [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|323132171|gb|ADX19601.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332990660|gb|AEF09643.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 408

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGRIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGRIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 404



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        RID    R  N  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGRIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|321460857|gb|EFX71895.1| hypothetical protein DAPPUDRAFT_227757 [Daphnia pulex]
          Length = 468

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 77/218 (35%), Gaps = 21/218 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K+A AT D  D + VY   T      +   + +  I +  +       L    
Sbjct: 153 AWHPHCNKLAVATRD--DTVLVYTGSTSTPVVVRH--SSQKDISSLAWRPLCSAQLAVGC 208

Query: 278 KDEAMDIYSVDLQSNATER-------LTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                 +++VD  S  T         L +   +N   S+ P    +   S       LY+
Sbjct: 209 ALGVA-LWTVDPASLGTRPSASCLTHLPHPTSVNTV-SWDPQGKYLA--SGSAKDSSLYI 264

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                 +   + + +   Y    W+P GD +      G  F I   +   ++   +V D 
Sbjct: 265 WNVENREATLLQKIRGGGYTFLTWNPTGDRLL-AGTPGNVFKIWETRTWSAEIWDVV-DG 322

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           ++QA  WSP G   IF+          LY +D +   +
Sbjct: 323 HIQAAAWSPCGTKAIFADSVH----PILYCVDKSSSTK 356


>gi|307102512|gb|EFN50785.1| hypothetical protein CHLNCDRAFT_33357 [Chlorella variabilis]
          Length = 736

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 79/230 (34%), Gaps = 24/230 (10%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR---ALISVQKDEAMDIY 285
           A + +    R+Y+        P+ +    S +       +G R     +        +  
Sbjct: 172 AYFSNFGDQRLYVQQLAAGGPPQPVTAEGSKLRFADGEVDGGRGRLVCVVEDHSGGGEAV 231

Query: 286 S----VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQ--SN 334
           +    VDL S A   L +          SPD S++ +             QL+V     +
Sbjct: 232 TTVGAVDLASGAVTTLVSDADFYACPRLSPDGSRLAWVEWTHPNMPWDDTQLWVADVAPD 291

Query: 335 GS--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           G+    ++++ ++  S   P W P G L   +      + + V+  DG    +L+  +  
Sbjct: 292 GTLAGHRKVAGEEGESVVLPQWGPDGSLYFVSDAPEGWWNLHVLGTDGKVAAVLLMAAEF 351

Query: 393 QAPTW----SP----SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            AP W     P    S   ++         GS L  ID   +    +++P
Sbjct: 352 AAPMWQFGQRPFHVLSSGRILAVYNDPKKAGSTLALIDPASKAVQELDSP 401



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/269 (15%), Positives = 80/269 (29%), Gaps = 40/269 (14%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID--------------RAPK 251
           L  S  + L  P F+PN           E   +V +                        
Sbjct: 96  LITSATKRLGAPSFAPNGDLFWLEGRPAEKGRQVLVRRPHGGAAAADLTPGPDSGLNVRT 155

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+  +         S+    A  S   D+ + +  +       + +T        A    
Sbjct: 156 RVQEYGGGNYTLTDSA----AYFSNFGDQRLYVQQL-AAGGPPQPVTAEGSKLRFADGEV 210

Query: 312 DSSQ---IVFESDREGKEQLYV----MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           D  +   +    D  G  +       +         +  D +  Y  P  SP G  +A+ 
Sbjct: 211 DGGRGRLVCVVEDHSGGGEAVTTVGAVDLASGAVTTLVSDAD-FYACPRLSPDGSRLAWV 269

Query: 365 KFSGEKF-----AIGVMK--KDGS--QERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +++          + V     DG+    R +   E  ++  P W P G SL F      +
Sbjct: 270 EWTHPNMPWDDTQLWVADVAPDGTLAGHRKVAGEEGESVVLPQWGPDG-SLYFVSDAP-E 327

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQW 442
               L+ +  +G+   ++   A  + P W
Sbjct: 328 GWWNLHVLGTDGKVAAVLLMAAEFAAPMW 356



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 59/206 (28%), Gaps = 27/206 (13%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQII--GKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           +       L V  R+ +       +     +FS+    R     ++          +G  
Sbjct: 143 LTPGPDSGLNVRTRVQEYGGGNYTLTDSAAYFSNFGDQRLYVQQLAAGGPPQPVTAEG-- 200

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE--------------PRF 219
            S++ F    V  G  +    V D  G      T     +                 PR 
Sbjct: 201 -SKLRFADGEVDGGRGRLVCVVEDHSGGGEAVTTVGAVDLASGAVTTLVSDADFYACPRL 259

Query: 220 SPNQQKVAYATYDDEDILRVYLM--------DTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           SP+  ++A+  +   ++              D  +    K  G     ++ P++  +G  
Sbjct: 260 SPDGSRLAWVEWTHPNMPWDDTQLWVADVAPDGTLAGHRKVAGEEGESVVLPQWGPDGSL 319

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL 297
             +S   +   +++ +         L
Sbjct: 320 YFVSDAPEGWWNLHVLGTDGKVAAVL 345



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 73/225 (32%), Gaps = 35/225 (15%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTL--FIN 304
           + I +    + AP F+ NG   L  ++          +        A   LT      +N
Sbjct: 95  ELITSATKRLGAPSFAPNGD--LFWLEGRPAEKGRQVLVRRPHGGAAAADLTPGPDSGLN 152

Query: 305 I--------SASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWS 355
           +          +Y+   S   F +   G ++LYV Q + G   + ++ +     F     
Sbjct: 153 VRTRVQEYGGGNYTLTDSAAYFSNF--GDQRLYVQQLAAGGPPQPVTAEGSKLRFADGEV 210

Query: 356 P--QGDLIAFTKFSGEKFA----IGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSR 408
              +G L+   +           +G +         LV D++  A P  SP G  L +  
Sbjct: 211 DGGRGRLVCVVEDHSGGGEAVTTVGAVDLASGAVTTLVSDADFYACPRLSPDGSRLAWVE 270

Query: 409 KKDGDT---GSKLYSIDL--NGRNETLINTPAYASD----PQWVG 444
               +     ++L+  D+  +G             +    PQW  
Sbjct: 271 WTHPNMPWDDTQLWVADVAPDGTLAGHRKVAGEEGESVVLPQWGP 315


>gi|302833241|ref|XP_002948184.1| hypothetical protein VOLCADRAFT_58187 [Volvox carteri f.
           nagariensis]
 gi|300266404|gb|EFJ50591.1| hypothetical protein VOLCADRAFT_58187 [Volvox carteri f.
           nagariensis]
          Length = 410

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 76/228 (33%), Gaps = 18/228 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    S+ + D      + +       +    FSPN   +A A+ D      V L D  
Sbjct: 79  SGSEDRSVRLWDPLTGEQKAVLFGHAGQVLGVAFSPNGAYIASASLDS----TVRLWDAS 134

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGK-----RALISVQKDEAMDIYSVDLQSNATE-RLTN 299
                  +      +    F+  G      R L S   D+++ ++  DL     + R T 
Sbjct: 135 TGEEKAELAGHVDWVRDVAFAPAGAPGVPGRLLASCGDDKSVKLW--DLGGPQPQLRYTM 192

Query: 300 TLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
               ++  S  ++P+ + I   S       + +        +              ++P 
Sbjct: 193 LGHTDVVSSLCWAPNGNLIASASS---DLSIRLWDPTTGPPEVELAGHVDKVLCVNFAPD 249

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           G L+      G    +  + +  ++  LL   SN+ A  ++P G  + 
Sbjct: 250 GKLLVSASADGS-MRLWSVAERRAKGVLLGHASNVVAAAFAPGGHLVA 296



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 62/178 (34%), Gaps = 21/178 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      + +  F+  G     S  +D ++ ++   L       L       +  ++SP+
Sbjct: 58  LAQHHRAVNSVSFNPAGTLLA-SGSEDRSVRLWD-PLTGEQKAVLFGHAGQVLGVAFSPN 115

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG------DLIAFTKF 366
            + I   S       + +  ++  ++K           D  ++P G       L+A    
Sbjct: 116 GAYIASASL---DSTVRLWDASTGEEKAELAGHVDWVRDVAFAPAGAPGVPGRLLASC-- 170

Query: 367 SGEKFAIGVMKKDGSQERL----LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            G+  ++ +    G Q +L    L     + +  W+P+G  +  +     D   +L+ 
Sbjct: 171 -GDDKSVKLWDLGGPQPQLRYTMLGHTDVVSSLCWAPNGNLIASASS---DLSIRLWD 224


>gi|149173235|ref|ZP_01851866.1| WD-40 repeat [Planctomyces maris DSM 8797]
 gi|148848041|gb|EDL62373.1| WD-40 repeat [Planctomyces maris DSM 8797]
          Length = 1027

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 81/238 (34%), Gaps = 20/238 (8%)

Query: 182 ESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +  V+G     LCV D D G  I+ L    ++++     SP+        +       V 
Sbjct: 752 KRAVTGGHDKQLCVWDVDNGKLIQSL--DNEEVVSAGAISPDGLHAVTVGFGTG----VI 805

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             D    +   +    +  I    FS +GK    +  +D+++ I+  D  +    R++  
Sbjct: 806 FWDLEQMKRLDKRYGHQGRIWTLAFSPDGKEVA-TGSEDKSVRIW--DYATRK-SRISIP 861

Query: 301 LFINISA-SYSPDSSQIV-FESDREGK---EQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           L   +    +SPD  +++   S+  G     +  +  S+        +   A      +S
Sbjct: 862 LDNAVHFVRFSPDGKKLLTSTSNARGWKFPGRFQLWNSSNGKLLMEFKGHRACVNGAAFS 921

Query: 356 PQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             G  I      G    I       G Q   +   + L    + P    L+  R  +G
Sbjct: 922 DDGTEI---TSCGADSQICRWNAATGKQLSDITRRNGLSHINFIPHSPFLVMIRFSNG 976



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 96/297 (32%), Gaps = 30/297 (10%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF----NSR 176
               + E RLWD +  KQ+      S+    +         I   +      F     + 
Sbjct: 609 SGDRQGELRLWDPQTGKQVWRSPMRSAELPLQDRP------IIAKMLKWPDAFPDEGITS 662

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYATYDDED 235
           + F  E  V  +   +  +   D      L+       + +  F+ +   +   +    +
Sbjct: 663 LAFNQEQSVLAVGTVNGYLQTFDLVRFHELSTVFTGGPISDLMFTDDSSSLL-VSIVPGE 721

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           ++R +    +  R PK +      I       +GKRA+          +   D+ +    
Sbjct: 722 VVRCW----QSPRPPKMLSGHDGYIRFAALDESGKRAV---TGGHDKQLCVWDVDNGKLI 774

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPV 353
           +  +   +  + + SPD    V      G     V+  +    KR+      +   +   
Sbjct: 775 QSLDNEEVVSAGAISPDGLHAVTVGFGTG-----VIFWDLEQMKRLDKRYGHQGRIWTLA 829

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRK 409
           +SP G  +A          + +      + R+ +  D+ +    +SP G+ L+ S  
Sbjct: 830 FSPDGKEVATGSEDKS---VRIWDYATRKSRISIPLDNAVHFVRFSPDGKKLLTSTS 883



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 43/144 (29%), Gaps = 13/144 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +    + + + +   + + D +  +  K        + A  FS + +       
Sbjct: 117 SVSPDGRYAVVSRHINAEGSLLQIWDLQSGQVVKECHEPLG-VTAVAFSPDSQSLAY--- 172

Query: 278 KDEAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              A D   V   L      R  +         ++PD  Q+          QL++     
Sbjct: 173 --GAKDRAVVLQPLSGGPARRWVHHRLSIGGLDFAPDGKQLA---SLGHDNQLFIWDVAT 227

Query: 336 SDQKRISQDKEASYFDPV--WSPQ 357
                 + D E  +   V   +P 
Sbjct: 228 GKLISQAIDGEGRFATQVRFVAPD 251



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 47/147 (31%), Gaps = 10/147 (6%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           + V  + T        +    S I +   + +GK+ L        + I  ++   + + +
Sbjct: 488 VEVLDLKTSTLTKTIPVSRSGSAITSLSLAPDGKQLLAGDAVGNTVWINPLNDSPSVSRQ 547

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWS 355
                    +A++SPD           G+ +  V+       +R + +  E       +S
Sbjct: 548 --AHKGRVRAATFSPDGRWAA----TAGEGRTVVIWDVTRQSRRSTLNGHEDVVQALAFS 601

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           P   L+      G    + +      +
Sbjct: 602 PDSRLLISGDRQG---ELRLWDPQTGK 625



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 68/180 (37%), Gaps = 14/180 (7%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYS--- 310
              ++AP+FSS+GK  +         ++  +D+ +   ++   L  +  +N     +   
Sbjct: 417 EGPLVAPQFSSDGKTLV---TVKGPGNVICMDIGTGLVQQRFTLPESKSMNEKNHITMVV 473

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            DSSQI +     GK ++  ++++   +        ++      +P G  +      G  
Sbjct: 474 TDSSQI-YCGTSTGKVEVLDLKTSTLTKTIPVSRSGSAITSLSLAPDGKQLLAGDAVGNT 532

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             I  +    S  R       ++A T+SP GR   ++          ++ +    R  TL
Sbjct: 533 VWINPLNDSPSVSRQ-AHKGRVRAATFSPDGR---WAATAGEGRTVVIWDVTRQSRRSTL 588



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 62/164 (37%), Gaps = 20/164 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             S +G+ A++S   +    +  + DLQS    +  +      + ++SPDS  + +    
Sbjct: 117 SVSPDGRYAVVSRHINAEGSLLQIWDLQSGQVVKECHEPLGVTAVAFSPDSQSLAY---- 172

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             K++  V+Q       R       S     ++P G  +A     G    + +       
Sbjct: 173 GAKDRAVVLQPLSGGPARRWVHHRLSIGGLDFAPDGKQLA---SLGHDNQLFIWDVATG- 228

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            +L+ +  + +       GR   F+ +       +L+++  +G+
Sbjct: 229 -KLISQAIDGE-------GR---FATQVRFVAPDRLWTLGTDGK 261



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 60/196 (30%), Gaps = 16/196 (8%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            + V +G    S+ + D      R ++   D  +   RFSP+ +K+  +T +         
Sbjct: 835  KEVATGSEDKSVRIWDYATRKSR-ISIPLDNAVHFVRFSPDGKKLLTSTSNARGWKFPGR 893

Query: 242  MDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERL 297
                     K +  F+     +    FS +G              I   +  +      +
Sbjct: 894  FQLWNSSNGKLLMEFKGHRACVNGAAFSDDGTEI---TSCGADSQICRWNAATGKQLSDI 950

Query: 298  TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWS 355
            T    +    ++ P S  +V      G     V   +    KR+S       +  D   S
Sbjct: 951  TRRNGL-SHINFIPHSPFLVMIRFSNG-----VFIDDAKSLKRLSEFSVPTRTIGDLNIS 1004

Query: 356  PQGDLIAFTKFSGEKF 371
             + + I      G  F
Sbjct: 1005 AKSNRIIAGTQEGRIF 1020



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 49/112 (43%), Gaps = 11/112 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P+ +++  A     + + +  ++     + +     +  + A  FS +G+ A  +    
Sbjct: 517 APDGKQLL-AGDAVGNTVWINPLNDSPSVSRQA---HKGRVRAATFSPDGRWAATA---- 568

Query: 280 EAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLY 329
                  +   +  + R T     ++  + ++SPD S+++   DR+G+ +L+
Sbjct: 569 GEGRTVVIWDVTRQSRRSTLNGHEDVVQALAFSPD-SRLLISGDRQGELRLW 619


>gi|115529409|ref|NP_001070232.1| hypothetical protein LOC767797 [Danio rerio]
 gi|115313683|gb|AAI24341.1| Zgc:153384 [Danio rerio]
 gi|182889134|gb|AAI64686.1| Zgc:153384 protein [Danio rerio]
          Length = 509

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 66/177 (37%), Gaps = 9/177 (5%)

Query: 195 VMDRDG-ANIRYLTPSRDQ-ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +   DG +N +  T   ++  +    FS + +++      ++      +M+ R+      
Sbjct: 230 LFQVDGKSNPKIQTVHLEKFPVRRAAFSADGEQIVATGMRNKLFYIYDMMEGRVIPVASV 289

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            G     +   + S +GK  L+S     +  ++ +  ++    R         SA ++ D
Sbjct: 290 RGLREQRVSDFQVSPDGKFLLLSGS---SGYLHLMTTKTREVVRSMKLNGSVCSAGFTAD 346

Query: 313 SSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            + I F S  +G  +++V     S   K+ + +          S  G  +A    SG
Sbjct: 347 GNTI-FSSSEDG--EVFVWDVQSSRCVKKFTDEGCVRATSLCVSRDGRYLACGSQSG 400



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 78/213 (36%), Gaps = 29/213 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F P+ Q V   T   +  + ++ +D + +   + +   +  +    FS++G++ + +  +
Sbjct: 212 FHPSAQIV--MTAGLDHCVSLFQVDGKSNPKIQTVHLEKFPVRRAAFSADGEQIVATGMR 269

Query: 279 DEAMDIYSV---------DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           ++   IY +          ++    +R+++          SPD     F         L+
Sbjct: 270 NKLFYIYDMMEGRVIPVASVRGLREQRVSDF-------QVSPDGK---FLLLSGSSGYLH 319

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +M +   +  R S     S     ++  G+ I  +   GE F   V        +   ++
Sbjct: 320 LMTTKTREVVR-SMKLNGSVCSAGFTADGNTIFSSSEDGEVFVWDVQS--SRCVKKFTDE 376

Query: 390 SNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
             ++A +   S  GR L    +        +YS
Sbjct: 377 GCVRATSLCVSRDGRYLACGSQSG---VVNIYS 406


>gi|114647209|ref|XP_001156861.1| PREDICTED: WD SOCS-box protein 2 isoform 2 [Pan troglodytes]
          Length = 404

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 83/216 (38%), Gaps = 23/216 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D+
Sbjct: 119 PDVSCLVLATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDK 176

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 177 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 233

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----------- 389
             +  ++S     +SP   L+    +      I      G + R L              
Sbjct: 234 KLEGHQSSVVSCDFSPDSALLVTASYDTN--VIMWDPYTGERLRSLHHTQVDPAMDDSDV 291

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S+L++  +SP G   ++      D   ++++++L
Sbjct: 292 HISSLRSVCFSPEG---LYLATVADDRLLRIWALEL 324



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 72/247 (29%), Gaps = 41/247 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 16  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKN 75

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKRA---------------LISVQKDEAM 282
           +T+   +PK            +  +P  S   ++                L +   D  +
Sbjct: 76  ETKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLVLATGLNDGQI 135

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 136 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 194

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 195 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 252

Query: 403 SLIFSRK 409
            L+ +  
Sbjct: 253 LLVTASY 259


>gi|322434058|ref|YP_004216270.1| peptidase S9 prolyl oligopeptidase [Acidobacterium sp. MP5ACTX9]
 gi|321161785|gb|ADW67490.1| peptidase S9 prolyl oligopeptidase [Acidobacterium sp. MP5ACTX9]
          Length = 618

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 49/239 (20%), Positives = 80/239 (33%), Gaps = 29/239 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQ 277
           SPN + +AY        L V++             + R  I   ++  +G+  L     +
Sbjct: 27  SPNGKMIAYLAPAAGK-LSVWVRTIGQADDRVVAQDPRRPIPWAQWQGDGEHVLYLQDSE 85

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--REGKEQLYVMQSNG 335
            DE   ++ V+L     + LT    +            +  +     EG   L    +  
Sbjct: 86  GDENYHLFRVNLLGGEPQDLTPGSNLRALP--------LALDYQFPNEGLVTLNARNARL 137

Query: 336 SDQKRI-------SQDKEASYFDPVWSPQGD---LIAFTKFSGEKFAIGVMKKDGSQERL 385
            D  R+       + D E      +W    +     A  + +   F I V   DGS  RL
Sbjct: 138 MDVHRLDFAAKSNTLDTENPGDVLLWLADNELRVRAAVAQVADGSFVIRVRDADGSDWRL 197

Query: 386 L----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL-YSIDLNGRNETLINTPAYASD 439
           L      D   +   +SP  + L     KD DT   + Y +  +G   TL   P Y  +
Sbjct: 198 LDEIPFADGRPRLVAFSPDNQCLYVITAKDADTHRLVQYEVS-SGAVTTLFEDPEYDVE 255


>gi|229163304|ref|ZP_04291256.1| TolB domain protein [Bacillus cereus R309803]
 gi|228620085|gb|EEK76959.1| TolB domain protein [Bacillus cereus R309803]
          Length = 416

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 65/160 (40%), Gaps = 23/160 (14%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG +       D  + I          +++T   +I     +S D   I +    +GK+Q
Sbjct: 31  NGAKVAFIRHHDLWIKI------DGKEKQITKGEYI-TGPKWSHDGEWIAYA---KGKKQ 80

Query: 328 --LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             L + +     + R  Q + ++Y    WSP+ ++IAF  F+       V +K+   E +
Sbjct: 81  NILELYRLEDGKKVRPLQSEASNY---QWSPKENVIAFV-FANTLNTFDVQEKNTDFENV 136

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRK----KDGDTGSKLYSI 421
               + +    W P G   + S +      G TG++LY +
Sbjct: 137 ---SAGVGDYAWYPDGEKFLVSSEAYLLPTGWTGAQLYEV 173



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/271 (17%), Positives = 95/271 (35%), Gaps = 59/271 (21%)

Query: 172 DFNSRILFVSESVVSGI----IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            F S IL  S             + L +   DG   +     + + +  P++S + + +A
Sbjct: 18  IFLSSILIASAEHNGAKVAFIRHHDLWI-KIDGKEKQIT---KGEYITGPKWSHDGEWIA 73

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           YA    ++IL +Y ++       K++   +S     ++S                 + + 
Sbjct: 74  YAKGKKQNILELYRLEDG-----KKVRPLQSEASNYQWSPKENVIAFVFAN----TLNTF 124

Query: 288 DLQSNATERLTNTLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Q        NT F N+SA     ++ PD  + +  S+       +     G+    + 
Sbjct: 125 DVQEK------NTDFENVSAGVGDYAWYPDGEKFLVSSEAYLLPTGWT----GAQLYEVQ 174

Query: 343 QDKEAS---------------------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVM 376
           +D   +                          WSP    I+F       +S +   + ++
Sbjct: 175 KDAHMNPYKMKHLYALPNEHDDFLALVASGFKWSPDRKWISFLAVPTASWSADSNTLCLV 234

Query: 377 KKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIF 406
           + DGS+ E++     N +   W+PS   L +
Sbjct: 235 RADGSRFEKVDQMLLNTEWFKWAPSKNILAY 265



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 36/88 (40%), Gaps = 10/88 (11%)

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +AF +       I        +E+ + +   +  P WS  G  + +++ K      
Sbjct: 31  NGAKVAFIRHHDLWIKID------GKEKQITKGEYITGPKWSHDGEWIAYAKGKK-QNIL 83

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVG 444
           +LY ++ +G+    + +   AS+ QW  
Sbjct: 84  ELYRLE-DGKKVRPLQS--EASNYQWSP 108



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 79/202 (39%), Gaps = 29/202 (14%)

Query: 218 RFSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           ++SP+++ +++        + D   +  V    +R ++  + + N      AP      K
Sbjct: 206 KWSPDRKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTEWFKWAPS-----K 260

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREG- 324
             L  ++    + + +  L+      L     T   +++   ++  D   IV  +   G 
Sbjct: 261 NILAYIEGSGRVALENKHLKVKELPALQQNTFTPKGYVDWDFAWKNDKVIIVSRAKEAGI 320

Query: 325 --------KEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                      LY +      Q++I+    +   + P++  + + + + +   EK ++ +
Sbjct: 321 ETPPEKRPLPSLYEINRTSDIQQQITKPSHKLGDYHPIFMKKSNQLIWIRSDREKASVWI 380

Query: 376 MKKDGSQERLLVEDSNLQAPTW 397
           +  DG QE+  +E  N+  P W
Sbjct: 381 VNSDGKQEKKWIE--NIDVPEW 400


>gi|218201713|gb|EEC84140.1| hypothetical protein OsI_30493 [Oryza sativa Indica Group]
          Length = 1019

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 62/178 (34%), Gaps = 19/178 (10%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I  F   I +  F+  G     +   D    I ++D  +  ++ L          S+ P 
Sbjct: 111 IARFTLPIRSLAFNKKGTLLAAAGDDDGIKLIATID--NTISKVLKGHKGSVTGLSFDPR 168

Query: 313 SSQIVFESDREGKEQLY--VMQSNGSDQKRI--SQDKEASYFDP-VWSPQGDLIAFTKFS 367
           +  +    D  G    +     +     KRI  +   + S  +   WSP G  +A     
Sbjct: 169 NDYLA-SIDTFGTVIFWDLCTGTEARSLKRIAPTFGSDHSINNALCWSPDGQFLAV---P 224

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSI 421
           G +  + +  +D  +E +       + P     WSP+GR L+       D    ++ +
Sbjct: 225 GLRNNVVMYDRDTGEE-VFTLKGEHEQPVCSLCWSPNGRYLV---TAGFDKQVLIWDV 278



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 79/256 (30%), Gaps = 39/256 (15%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM----DR 198
               +P S   +A    D   +  +  +G F S I   +  + S        ++    D 
Sbjct: 77  ALAVAPGSGASLASGSIDHSVKFCSFPEGVFQSNIARFTLPIRSLAFNKKGTLLAAAGDD 136

Query: 199 DG--------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           DG          I  +       +    F P    +A      +    V   D       
Sbjct: 137 DGIKLIATIDNTISKVLKGHKGSVTGLSFDPRNDYLA----SIDTFGTVIFWDLCTGTEA 192

Query: 251 KRI-------GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           + +       G+  S+  A  +S +G+   +   ++   ++   D  +     +      
Sbjct: 193 RSLKRIAPTFGSDHSINNALCWSPDGQFLAVPGLRN---NVVMYDRDTGEE--VFTLKGE 247

Query: 304 NISAS----YSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQG 358
           +        +SP+   +V        +Q+ +       D +R   D+        W P+G
Sbjct: 248 HEQPVCSLCWSPNGRYLV---TAGFDKQVLIWDVKSKQDVERQKFDER--ICSLAWKPEG 302

Query: 359 DLIAFTKFSGEKFAIG 374
           + +A    +G +F I 
Sbjct: 303 NAVAVIDVTG-RFGIW 317


>gi|195327372|ref|XP_002030393.1| GM24599 [Drosophila sechellia]
 gi|194119336|gb|EDW41379.1| GM24599 [Drosophila sechellia]
          Length = 389

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 82/256 (32%), Gaps = 55/256 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  + RD A  R+ T     I    RF P+  ++A ++ D      V L +        R
Sbjct: 1   MQGLFRDPALERHFTGHSGGITQL-RFGPDGSQIATSSTDS----TVILWNLNQAARCIR 55

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-------------------SVDLQSNA 293
             +  + +    +S  G     S   D  + I+                   SVD  S  
Sbjct: 56  FASHSAAVNGVAWSPKGNLVA-SAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTG 114

Query: 294 TERLTNTLF----------------------INISASYSPDSSQIVFESDREGKEQLYVM 331
              LT +                           SA +SP+   +   SD    + + + 
Sbjct: 115 HWMLTASDDKSAKIWRVARRTFVSSFAQQNNWVRSAKFSPNGKLVATASD---DKSVRIY 171

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VED 389
             +  +  R   ++ A+     W P G+++A          I +    GSQ   L  V  
Sbjct: 172 DVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCN---RIKIFDVSGSQLLQLYVVHS 228

Query: 390 SNLQAPTWSPSGRSLI 405
           + +    + PSG  LI
Sbjct: 229 APVNDVAFHPSGHFLI 244



 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 49/150 (32%), Gaps = 13/150 (8%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
               T          + PD SQI   S  +    L+ +       +       A+     
Sbjct: 11  ERHFTGHSGGITQLRFGPDGSQIA-TSSTDSTVILWNLNQAARCIR--FASHSAAVNGVA 67

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           WSP+G+L+A +        I   K  G     +     +++  +  +G  ++ +     D
Sbjct: 68  WSPKGNLVA-SAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHWMLTASD---D 123

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             +K++ +             ++A    WV
Sbjct: 124 KSAKIWRV------ARRTFVSSFAQQNNWV 147


>gi|188993546|ref|YP_001905556.1| Putative dipeptidyl peptidase IV [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167735306|emb|CAP53520.1| Putative dipeptidyl peptidase IV [Xanthomonas campestris pv.
           campestris]
          Length = 751

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 72/220 (32%), Gaps = 42/220 (19%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P     L +P+ +P+  +V +    D D  ++ L +  I     R+     ++L     
Sbjct: 41  LPLSGPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWEYDIASGQTRLLVDSKVVL----- 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                            +   +      +R+     I +   ++PD+  ++F     G+ 
Sbjct: 96  ------------PGTETLSDAEKARRERQRIAAFAGI-VDYQWAPDAHALLFPL--GGEL 140

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            LY ++  GS   R     E    D   SP+G  ++F +       + V+     ++  L
Sbjct: 141 YLYDLRKTGSAAVRQLTHGEGFATDAKLSPKGGFVSFVRAR----NLWVIDLASGKQLQL 196

Query: 387 VEDS------------------NLQAPTWSPSGRSLIFSR 408
             D                         W+P   ++ F+R
Sbjct: 197 TRDGSDTIGNGVAEFVADEEMDRHTGYWWAPDDSAIAFAR 236



 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 54/343 (15%), Positives = 104/343 (30%), Gaps = 69/343 (20%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQI----- 213
               + +T  +G      L      VS +   +L V+D   G  ++      D I     
Sbjct: 150 SAAVRQLTHGEGFATDAKLSPKGGFVSFVRARNLWVIDLASGKQLQLTRDGSDTIGNGVA 209

Query: 214 ----------LFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRS 258
                          ++P+   +A+A  D+          VY   T +           +
Sbjct: 210 EFVADEEMDRHTGYWWAPDDSAIAFARIDESAVPIQKRPEVYADHTEVIDQRYPQAGQPN 269

Query: 259 M-----ILAPRFSS---------------------NGKRALISVQKDE--AMDIYSVDLQ 290
           +     ++ PR S+                     + +R     Q  +   + +    L 
Sbjct: 270 VTVQLGVIVPRASATPQWIDLGKQADIYLARVDWRDAQRLTFQRQSRDQKTLQLIEATLA 329

Query: 291 SNATERLTNTLFINISASYSP---------DSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           S     L        S ++ P         D  + ++ S+R G E LYV   +G+    +
Sbjct: 330 SGKQRVLIT----ETSPTWVPLTNDLRFLKDG-RFLWNSERSGYEHLYVASEDGTTLTPL 384

Query: 342 SQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           +              Q  L+ F  +K S  +  I  +   G         +   A +++ 
Sbjct: 385 TSGAWVVDALLAVDEQAGLVYFAGSKDSPTQTHIYAVALGGGAIEKRSASNGTHAASFA- 443

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQ 441
           +  S+      +  T  ++     NG    TL+      +DPQ
Sbjct: 444 NNASVYVDTWSNTTTPPQIELFRANGEKIATLLQN--DVADPQ 484


>gi|19335616|gb|AAL85577.1| unknown protein [Aedes aegypti]
          Length = 335

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 93/283 (32%), Gaps = 46/283 (16%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD-DIYQSIT 167
             +VTG +     DR++V    WDV    ++  +  F+  +         SD ++  S +
Sbjct: 58  DFVVTGGL----DDRVKV----WDVTKENKLKLRNTFTGRSLGVVSVDVSSDGEVIASSS 109

Query: 168 GEKG-------------------------DFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            + G                          F+    ++      G  K SL  ++  G  
Sbjct: 110 LDSGLCIWKADSGQLLNQISLGPVDLWTVAFSPCDKYIISGSHEG--KISLYSVES-GKP 166

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + L P   +      +SP+ + +A    D      + + D    +  + +      + +
Sbjct: 167 EQVLDPQNGKFTLSIAYSPDGKYIASGAIDG----IINIFDVAAGKVAQTLEGHAMSVRS 222

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             FS +  + L++   D  M +Y V   S+    L+      +S S+S D     F S  
Sbjct: 223 LCFSPD-SQMLLTASDDGHMKLYDV-AHSDVVGTLSGHSSWVLSVSFSGDGKS--FTSSS 278

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             K  + +            +D +   +   +SP    +    
Sbjct: 279 SDKT-VKIWNVAERQCLHTFEDHQDQVWGVKYSPDSSKVISVS 320



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 66/190 (34%), Gaps = 17/190 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRS---MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           RV + D   +   K    F      +++   SS+G+    S   D  + I+  D      
Sbjct: 68  RVKVWDVTKENKLKLRNTFTGRSLGVVSVDVSSDGEVIA-SSSLDSGLCIWKAD-SGQLL 125

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPV 353
            +++       + ++SP    I+  S      ++ +        +++   +   +     
Sbjct: 126 NQISLGPVDLWTVAFSPCDKYIISGSHEG---KISLYSVESGKPEQVLDPQNGKFTLSIA 182

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKD 411
           +SP G  IA     G    I +      +    +E   +   +  +SP  + L+ +    
Sbjct: 183 YSPDGKYIASGAIDG---IINIFDVAAGKVAQTLEGHAMSVRSLCFSPDSQMLLTASD-- 237

Query: 412 GDTGSKLYSI 421
            D   KLY +
Sbjct: 238 -DGHMKLYDV 246


>gi|22028422|gb|AAH34901.1| WD repeat domain 51A [Mus musculus]
 gi|74152276|dbj|BAE32416.1| unnamed protein product [Mus musculus]
 gi|148689182|gb|EDL21129.1| WD repeat domain 51A, isoform CRA_b [Mus musculus]
          Length = 405

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 83/228 (36%), Gaps = 18/228 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG + ++L +      +  Y        +    FSP+   +A  + D    +R+++ + +
Sbjct: 36  SGSMDSTLMIWHMKSQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRD--KTVRIWVPNVK 93

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +    R     + + +  F S+G+  + +   D+ + ++S   Q      LT  +    
Sbjct: 94  GESTVFR--AHTATVRSVHFCSDGQSLV-TASDDKTVKVWSTHRQ-RFLFSLTQHINWVR 149

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A +SPD   IV  SD    + + +      +      +         + P G  IA   
Sbjct: 150 CAKFSPDGRLIVSASD---DKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAG 206

Query: 366 FSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
                  +     D    RLL    +  + + A ++ PSG  LI +  
Sbjct: 207 MDNTV-KVW----DARTHRLLQHYQLHSAAVNALSFHPSGNYLITASS 249



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 69/225 (30%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +      +  +    +    F  + Q +  A+ D      V +  T 
Sbjct: 78  SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDK----TVKVWSTH 133

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             R    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 134 RQRFLFSLTQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKTSRECIHSYCEHGGFV 190

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + I           + V  +      +  Q   A+     + P G+ +   
Sbjct: 191 TYVDFHPSGTCIAAAGM---DNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITA 247

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 248 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 282


>gi|332668419|ref|YP_004451207.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Haliscomenobacter hydrossis DSM 1100]
 gi|332337233|gb|AEE54334.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 723

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 56/158 (35%), Gaps = 17/158 (10%)

Query: 265 FSSNGKRALI-SVQKDE-AMDIYSVDLQSNATERL------TNTLFINISASYS--PDSS 314
           +S++G +    S  +D     +   D  +     +      T       S ++     S+
Sbjct: 255 WSADGSKLAFVSSSRDHKEAKLRIADAATGVVREVLEEKVATQYESGQGSINWHFLAASN 314

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---- 370
           +I++ S+R+    LY+  +N    K      +      + + + + I +   +G +    
Sbjct: 315 EIIWYSERDDWGHLYLYDANTGKLKTQMTKGDFVVTRLLKTDEKNRILYFLANGREQGRD 374

Query: 371 ---FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                   +   G   +LL  +    + + SP G+  +
Sbjct: 375 PYFSHFYRVDFSGQNLKLLTPEDGHHSISLSPDGKYFV 412



 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 77/261 (29%), Gaps = 52/261 (19%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------- 251
           G N   L  + +     P +  +  K  Y+         V +      R           
Sbjct: 36  GFNTNRLVYNSN---VNPVWLADG-KFWYSVNTASGDQFVLINPVDGSRKTAADLKSLLP 91

Query: 252 -----RIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL---- 301
                R         +P   S +GK+A       +  +++  D+ +    +LT       
Sbjct: 92  GAENDRPAPTGRRNFSPEVLSPDGKKAAFI----KDWNLWVRDVATKQETQLTTDGIKDF 147

Query: 302 FINISAS-----------YSPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                 +           +SPDS +I  F+ D+     +Y++ +     K  +      Y
Sbjct: 148 GYATDNAGWKHSDRAILLWSPDSKKIATFQQDQRHVSDMYLVSTKVGAPKLEAWK----Y 203

Query: 350 FDPVWSPQGDLIAFTKF---SGEKFAIGVMKKDGSQERLLVED----SNLQAPTWSPSGR 402
             PV     D+I   +       +  I +     ++   L +D     +     WS  G 
Sbjct: 204 PLPV---DKDIIKIQRVIIEVDNRKVIRLQIPADARRGTLCDDISCSGSFDDNEWSADGS 260

Query: 403 SLIFSRKKDGDTGSKLYSIDL 423
            L F         +KL   D 
Sbjct: 261 KLAFVSSSRDHKEAKLRIADA 281


>gi|255014007|ref|ZP_05286133.1| putative alanyl dipeptidyl peptidase [Bacteroides sp. 2_1_7]
          Length = 830

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 88/271 (32%), Gaps = 37/271 (13%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKV 226
            ++G    R+L  ++ +     ++ +   D + G   +      D  + +   S + + +
Sbjct: 303 PKEGTDLIRVLEPADRIPGFRDRSFIWRYDLKTGLYEQLTFGHTDTYIND--ISADSRYL 360

Query: 227 AYATYD------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            ++T D            +Y +D +             +  A  FS +GK+ L++   D 
Sbjct: 361 LFSTSDRVYTSLPHSRNSLYKLDLQTMAIDTIWEKAPYVNQA-AFSPDGKQLLVAGAGD- 418

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
                + D      ++        IS SY  D              QL++          
Sbjct: 419 -----AFDGIGRNIKQ------GQISNSY--DG-------------QLFLYDLASRKVSP 452

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           +++D   +  D VW+     I       +   I        + + +    ++        
Sbjct: 453 LTKDFNPNVIDAVWNRFNGQIYILCEDEDYQRIYTCDPANGKIKQVAASEDIIMSYALAD 512

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              ++F   +     ++LY+ DL G    L+
Sbjct: 513 NAPVLFYYGQSASNANRLYAYDLKGGKNRLV 543



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/373 (10%), Positives = 105/373 (28%), Gaps = 65/373 (17%)

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           L +   V G +   G       F ++ V D+      +    P  ++ +   ++ +    
Sbjct: 101 LNSDRYVKGTLDISGPG----AFEVF-VNDKPVGASSELVMEPRRYQVVVKYLTAETDTC 155

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
               K  F S       + ++   + +L            +   +D        SPN + 
Sbjct: 156 PPSLKATFKSEAEAKVVASLNPEKRYTLL----------NILEGKDFQGV--SVSPNGKY 203

Query: 226 -VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +        +               + +    S +   ++     R   +    +  ++
Sbjct: 204 ALVKYVNRFPESKSESYGQLMDAATGRVLLQDGSFLTTAKWMPKSNRLYYTRTGLDGTEL 263

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----------------- 327
            +VD  +     L   L       ++PD S +++  + EG ++                 
Sbjct: 264 VTVDPATYQQTVLVPNL-PKGRFVFTPDESTLLYTVEEEGPKEGTDLIRVLEPADRIPGF 322

Query: 328 -----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-------AFTKFSGEKFAIGV 375
                ++         ++++     +Y +   S     +        +T     + ++  
Sbjct: 323 RDRSFIWRYDLKTGLYEQLTFGHTDTYIN-DISADSRYLLFSTSDRVYTSLPHSRNSLYK 381

Query: 376 MKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFS---------------RKKDGDTGSKLY 419
           +         +  +   +    +SP G+ L+ +                +       +L+
Sbjct: 382 LDLQTMAIDTIWEKAPYVNQAAFSPDGKQLLVAGAGDAFDGIGRNIKQGQISNSYDGQLF 441

Query: 420 SIDLNGRNETLIN 432
             DL  R  + + 
Sbjct: 442 LYDLASRKVSPLT 454


>gi|189192931|ref|XP_001932804.1| vegetative incompatibility protein HET-E-1 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187978368|gb|EDU44994.1| vegetative incompatibility protein HET-E-1 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 708

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 7/127 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R         +    FSP+ Q VA A++D+     V L +         +    S I A
Sbjct: 552 CRSTLEGHSSGVSAVAFSPDGQLVASASFDN----TVRLWEVATGTCRSTLEGHSSFIEA 607

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             FS +G + + S  +D+ + ++           L        + ++SPD  Q+V  + R
Sbjct: 608 VVFSPDG-QLVASASRDKTVRLWEA-ATGMCRSTLKGHSDWVGAVAFSPDG-QLVASASR 664

Query: 323 EGKEQLY 329
           +   +L+
Sbjct: 665 DKTVRLW 671



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 5/141 (3%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +     + +  + + +   D     +    S + A  FS +G + + S   D  + ++ 
Sbjct: 530 TFVDQVPQRVEMLSMKEADWDACRSTLEGHSSGVSAVAFSPDG-QLVASASFDNTVRLWE 588

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V         L        +  +SPD  Q+V  + R+   +L+  ++     +   +   
Sbjct: 589 V-ATGTCRSTLEGHSSFIEAVVFSPDG-QLVASASRDKTVRLW--EAATGMCRSTLKGHS 644

Query: 347 ASYFDPVWSPQGDLIAFTKFS 367
                  +SP G L+A     
Sbjct: 645 DWVGAVAFSPDGQLVASASRD 665



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 38/102 (37%), Gaps = 5/102 (4%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V S    N++ + +      R         +    FSP+ Q VA A+ D      V L +
Sbjct: 575 VASASFDNTVRLWEVATGTCRSTLEGHSSFIEAVVFSPDGQLVASASRDK----TVRLWE 630

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                    +      + A  FS +G + + S  +D+ + ++
Sbjct: 631 AATGMCRSTLKGHSDWVGAVAFSPDG-QLVASASRDKTVRLW 671



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 11/114 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD   +   S       + + +      +   +   +     V+SP G L+A     
Sbjct: 567 AFSPDGQLVASASF---DNTVRLWEVATGTCRSTLEGHSSFIEAVVFSPDGQLVASASRD 623

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLY 419
                + + +      R  ++  +    A  +SP G+ +  + +   D   +L+
Sbjct: 624 KT---VRLWEAATGMCRSTLKGHSDWVGAVAFSPDGQLVASASR---DKTVRLW 671



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 4/76 (5%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
              +      +SP G L+A   F      +  +     +  L    S ++A  +SP G+ 
Sbjct: 558 GHSSGVSAVAFSPDGQLVASASFDNTV-RLWEVATGTCRSTLEGHSSFIEAVVFSPDGQL 616

Query: 404 LIFSRKKDGDTGSKLY 419
           +  + +   D   +L+
Sbjct: 617 VASASR---DKTVRLW 629


>gi|168818332|ref|ZP_02830332.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205344511|gb|EDZ31275.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320088237|emb|CBY97999.1| Uncharacterized protein yidR [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 408

 Score = 56.6 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGRIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGRIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 404



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        RID    R  N  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGRIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|241958572|ref|XP_002422005.1| transcription initiation factor TFIID subunit, putative [Candida
           dubliniensis CD36]
 gi|223645350|emb|CAX40006.1| transcription initiation factor TFIID subunit, putative [Candida
           dubliniensis CD36]
          Length = 820

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 83/241 (34%), Gaps = 33/241 (13%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTP--------------SRDQILFEPRFSPNQQKVAYA 229
           V +G   + + +   DG  ++ +                     ++   FSP+ + +   
Sbjct: 488 VAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPDNKYLLSC 547

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D    +R++ +DT       +       +   +FS  G    ++   D+   +++ D 
Sbjct: 548 SED--KTVRLWSLDTYTALVSYKGHTQP--VWDVKFSPLGHY-FVTASHDQTARLWATDH 602

Query: 290 QSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                 R+      ++    + P+S+  VF    +   +++    +  +  R+      S
Sbjct: 603 IY--PLRIFAGHINDVDCVEFHPNSNY-VFTGSSDKTCRMW--DVHTGNCVRVFLGHTNS 657

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSL 404
                 SP G  +A     GE   I V    GS  RL     + +A      +S  G  L
Sbjct: 658 VNCLAVSPDGRWLA---SGGEDGIICVWDI-GSGRRLKSMRGHARASLYSLAFSRDGTVL 713

Query: 405 I 405
           +
Sbjct: 714 V 714


>gi|70991757|ref|XP_750727.1| WD repeat protein [Aspergillus fumigatus Af293]
 gi|66848360|gb|EAL88689.1| WD repeat protein [Aspergillus fumigatus Af293]
 gi|159124289|gb|EDP49407.1| WD repeat protein [Aspergillus fumigatus A1163]
          Length = 542

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 18/210 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              ++L     + +   +FSP+   +A           V + +TR  +         + I
Sbjct: 163 YQQKFLLRGHLRGVSAVKFSPDSTMIA----SGGADGAVKVWNTRSGKLIHTFEGHLAGI 218

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVF 318
               +S +G     S   D+ + ++  ++ +     +            ++SP  + +V 
Sbjct: 219 STISWSPDGATIA-SGSDDKTIRLW--NVLTGKAHPIPFVGHHNYVYQIAFSPKGNMLVS 275

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E +++     +   R                 G LI      G    I +   
Sbjct: 276 GSY---DEAVFLWDVRSASVMRSLPAHSDPVSGVDVVWDGTLIVSCATDG---LIRIWDT 329

Query: 379 DGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
              Q  R LV + N  + A  +SP+G+ ++
Sbjct: 330 ATGQCLRTLVHEDNPPVTAVKFSPNGKFVL 359



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 9/193 (4%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G    +    S  + SG    ++ V +     + +        +    +SP+   +A  
Sbjct: 174 RGVSAVKFSPDSTMIASGGADGAVKVWNTRSGKLIHTFEGHLAGISTISWSPDGATIASG 233

Query: 230 TYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           + D      + L +    +  P       + +    FS  G   + S   DEA+ ++ V 
Sbjct: 234 SDDK----TIRLWNVLTGKAHPIPFVGHHNYVYQIAFSPKGNMLV-SGSYDEAVFLWDVR 288

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             S     L              D + IV  +  +G  +++   + G   + +  +    
Sbjct: 289 SAS-VMRSLPAHSDPVSGVDVVWDGTLIVSCAT-DGLIRIWDT-ATGQCLRTLVHEDNPP 345

Query: 349 YFDPVWSPQGDLI 361
                +SP G  +
Sbjct: 346 VTAVKFSPNGKFV 358


>gi|68477027|ref|XP_717491.1| likely TFIID and SAGA complex component Taf5p [Candida albicans
           SC5314]
 gi|68477212|ref|XP_717399.1| likely TFIID and SAGA complex component Taf5p [Candida albicans
           SC5314]
 gi|46439108|gb|EAK98430.1| likely TFIID and SAGA complex component Taf5p [Candida albicans
           SC5314]
 gi|46439204|gb|EAK98525.1| likely TFIID and SAGA complex component Taf5p [Candida albicans
           SC5314]
 gi|238879904|gb|EEQ43542.1| transcription initiation factor TFIID subunit 5 [Candida albicans
           WO-1]
          Length = 798

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 83/241 (34%), Gaps = 33/241 (13%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTP--------------SRDQILFEPRFSPNQQKVAYA 229
           V +G   + + +   DG  ++ +                     ++   FSP+ + +   
Sbjct: 476 VAAGFQDSYIKLWSLDGKPLKSVLKRDRHKPQENTRKLIGHSGPVYGVSFSPDNKYLLSC 535

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D    +R++ +DT       +       +   +FS  G    ++   D+   +++ D 
Sbjct: 536 SED--KTVRLWSLDTYTALVSYKGHTQP--VWDVKFSPLGHY-FVTASHDQTARLWATDH 590

Query: 290 QSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                 R+      ++    + P+S+  VF    +   +++    +  +  R+      S
Sbjct: 591 IY--PLRIFAGHINDVDCVEFHPNSNY-VFTGSSDKTCRMW--DVHTGNCVRVFLGHTNS 645

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSL 404
                 SP G  +A     GE   I V    GS  RL     + +A      +S  G  L
Sbjct: 646 VNCLAVSPDGRWLA---SGGEDGIICVWDI-GSGRRLKSMRGHARASLYSLAFSRDGTVL 701

Query: 405 I 405
           +
Sbjct: 702 V 702


>gi|294666444|ref|ZP_06731688.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292603813|gb|EFF47220.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 844

 Score = 56.2 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 86/253 (33%), Gaps = 26/253 (10%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRF 219
           DI +    E      RI   + +       + L ++   DG+  +         L +  +
Sbjct: 90  DIAEVAQPELKLAGLRIHPKTFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSW 149

Query: 220 SPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQ 277
           SP+Q+ +A+   D       ++L+D    +A + +     S+    R+  +G   L+  Q
Sbjct: 150 SPDQRHLAFRREDAASGANELWLVDVAAGQARRLVAGLNTSVNDDVRWLPDGSGLLLQQQ 209

Query: 278 KDEAMDIYSVDLQ-SNATERLTNTLFINIS-ASYSP----DSSQIVFESDREGKEQLYVM 331
                   S D   +    + T+      S  +Y      ++   VFE    G+  +  +
Sbjct: 210 VAGQGTPPSRDATPTGPATQQTSAAAGVRSLPTYQDLLRNEADARVFEYYATGQPIIVTV 269

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIGVMKKDG 380
                  + I+      Y +   SP G  I  ++ S   F            I V+   G
Sbjct: 270 A---GQVRPIAT--PGIYLNLSVSPDGRYIL-SERSERPFSYLVPVDNFARRIEVLDLQG 323

Query: 381 SQERLLVEDSNLQ 393
              R + +   ++
Sbjct: 324 KLVRQIAQLPLVE 336



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 72/219 (32%), Gaps = 15/219 (6%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQ--KDEAMD 283
            +A        +++L+        +  G    + LA   +S + +      +     A +
Sbjct: 110 TFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASGANE 169

Query: 284 IYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKR 340
           ++ VD+ +    RL   L   +N    + PD S ++ +    G+       +       +
Sbjct: 170 LWLVDVAAGQARRLVAGLNTSVNDDVRWLPDGSGLLLQQQVAGQGTPPSRDATPTGPATQ 229

Query: 341 ISQDKEASYFDPVWSP----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +         P +      + D   F  ++  +  I  +     Q R +         +
Sbjct: 230 QTSAAAGVRSLPTYQDLLRNEADARVFEYYATGQPIIVTVA---GQVRPIATPGIYLNLS 286

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            SP GR ++   ++     S L  +D   R   +++   
Sbjct: 287 VSPDGRYIL--SERSERPFSYLVPVDNFARRIEVLDLQG 323



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 12/133 (9%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFS--GE 369
           +S+  F S      +L+++      +++I+      S  D  WSP    +AF +      
Sbjct: 113 ASRFSFAS------KLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASG 166

Query: 370 KFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              + ++     Q R LV     S      W P G  L+  ++  G            G 
Sbjct: 167 ANELWLVDVAAGQARRLVAGLNTSVNDDVRWLPDGSGLLLQQQVAGQGTPPSRDATPTGP 226

Query: 427 NETLINTPAYASD 439
                +  A    
Sbjct: 227 ATQQTSAAAGVRS 239



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 378 KDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            DGS+ ++  L    +L   +WSP  R L F R+      ++L+ +D+       +    
Sbjct: 128 ADGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASGANELWLVDVAAGQARRLVAGL 187

Query: 436 YAS---DPQWVG 444
             S   D +W+ 
Sbjct: 188 NTSVNDDVRWLP 199


>gi|284041013|ref|YP_003390943.1| peptidase S9B dipeptidylpeptidase IV domain protein [Spirosoma
           linguale DSM 74]
 gi|283820306|gb|ADB42144.1| peptidase S9B dipeptidylpeptidase IV domain protein [Spirosoma
           linguale DSM 74]
          Length = 733

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/309 (14%), Positives = 97/309 (31%), Gaps = 55/309 (17%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            +S + YQ    E+     ++L  ++        +       D         S+      
Sbjct: 93  RVSVEGYQLSADER-----KLLITTQEEPIYRRSSKAEFYVYDLTTKALKQLSKAGKQQY 147

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-----------------SM 259
             FSP+ ++VA+   ++     ++++D    +  K   + R                 SM
Sbjct: 148 ATFSPDGKQVAFMRENN-----LFVVDLDTQKETKLTTDGRQNAIINGGADWVYEEEFSM 202

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             A  +S + KR       +  +  Y + L             I     Y          
Sbjct: 203 ARAFEWSPDSKRLAWIRFDESRVPEYDMQLWGGL-------YPIEYRFKYPKAG------ 249

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIA---FTKFSGEKFAIG 374
            +   +  ++V       + +     E   + P   W+   +L++     +   +   + 
Sbjct: 250 -EANSRVSVWVANVLTGKKVQAQTGTETDIYLPRIQWTKNPELLSIRRMNRLQNKLDLLH 308

Query: 375 VMKKDGSQERLLVEDSNLQAP-------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           V    G    +L E S            T+   G+S ++S ++ G    +LY   +NG+ 
Sbjct: 309 VNAATGQATTVLTETSATYVDLEFTDDLTYLADGKSFLWSSERSG--YKQLYLYTINGQL 366

Query: 428 ETLINTPAY 436
              I T  +
Sbjct: 367 IRPITTGNF 375



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 83/245 (33%), Gaps = 47/245 (19%)

Query: 219 FSPNQQKVAYATYDDEDIL-----------------------------RVYLMDTRIDRA 249
           +SP+ +++A+  +D+  +                               V++ +    + 
Sbjct: 208 WSPDSKRLAWIRFDESRVPEYDMQLWGGLYPIEYRFKYPKAGEANSRVSVWVANVLTGKK 267

Query: 250 PKRIGNFRSMILAPR--FSSNGKRALISVQKDEAM----DIYSVDLQSNATE-RLTNTLF 302
            +      + I  PR  ++ N +  L+S+++   +    D+  V+  +      LT T  
Sbjct: 268 VQAQTGTETDIYLPRIQWTKNPE--LLSIRRMNRLQNKLDLLHVNAATGQATTVLTETSA 325

Query: 303 INISASYS------PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             +   ++       D    ++ S+R G +QLY+   NG   + I+              
Sbjct: 326 TYVDLEFTDDLTYLADGKSFLWSSERSGYKQLYLYTINGQLIRPITTGNFEVSSVSGVDE 385

Query: 357 QGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSLIFSRKKDGD 413
           +   I FT    S  +  +  +  DG  ++ L          +SP     L++    +  
Sbjct: 386 KTGTIFFTSTEMSPLERHLYRIGLDGQNKQKLTTLPGTYTTNFSPDFTYYLLYHTSSNAP 445

Query: 414 TGSKL 418
               L
Sbjct: 446 VRVSL 450



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 36/107 (33%), Gaps = 18/107 (16%)

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQERLLVE 388
               KR+S +          S     +  T           K    V        + L +
Sbjct: 88  SGTTKRVSVEGYQ------LSADERKLLITTQEEPIYRRSSKAEFYVYDLTTKALKQLSK 141

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
               Q  T+SP G+ + F R+      + L+ +DL+ + ET + T  
Sbjct: 142 AGKQQYATFSPDGKQVAFMRE------NNLFVVDLDTQKETKLTTDG 182



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 7/124 (5%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGK- 325
           +GK  L S ++     +Y   +       +T   F   S S     +  I F S      
Sbjct: 341 DGKSFLWSSERSGYKQLYLYTINGQLIRPITTGNFEVSSVSGVDEKTGTIFFTSTEMSPL 400

Query: 326 -EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEKFAIGVMKK-DGSQ 382
              LY +  +G ++++++        +  +SP     + +   S     + +        
Sbjct: 401 ERHLYRIGLDGQNKQKLTTLPGTYTTN--FSPDFTYYLLYHTSSNAPVRVSLRDTKTTRD 458

Query: 383 ERLL 386
            R+L
Sbjct: 459 LRVL 462


>gi|237711368|ref|ZP_04541849.1| peptidase [Bacteroides sp. 9_1_42FAA]
 gi|229454063|gb|EEO59784.1| peptidase [Bacteroides sp. 9_1_42FAA]
          Length = 730

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 93/296 (31%), Gaps = 64/296 (21%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-----IGNFR 257
            ++     D+    P  SP+ + +A+          +Y+ +    +  +      +GN+ 
Sbjct: 134 QKHWMEVDDEKTASPVPSPDGKWIAFI-----KNQNIYVKEVATGKEKQLSLDGTLGNYY 188

Query: 258 SMILAPRFSSNGKRAL------------ISVQKDEAMDI--------------------- 284
           S  +  R+S + K+                V+   A  +                     
Sbjct: 189 SAYI--RWSPDSKKVASCKIRPVEKRYVYYVESSPADQLQPKLHKQEYAKPGDELPFKVP 246

Query: 285 YSVDLQSNAT----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQ 338
              +++S  +      L +  +      ++PDS  + FE ++ G +   V  + +     
Sbjct: 247 CIYEVESGRSIIPSTELFDRQYEVYGPEWNPDSRAVTFEYNQRGHQVYRVLELSAETGKV 306

Query: 339 KRI---SQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNL 392
           + +   + DK  +Y          G  + +         + +  +  +Q    + +    
Sbjct: 307 RPLVEETSDKYVNYTRHFRHDLKDGKQMIWMSERDNWNHLYMYNRITAQPDYQITKGEWY 366

Query: 393 --QAPTWSPSGRSLIFSRK--KDGDTGSKL--YSIDLNGRNETLINTPAYASDPQW 442
             +        R + FS    + G+    +  Y I  +G+  T + TP       W
Sbjct: 367 VREVLRVDEDNRQIYFSANGMEAGEDPYLIRYYRIGFDGKGLTCL-TPEEGMHRAW 421



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 19/168 (11%), Positives = 58/168 (34%), Gaps = 16/168 (9%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRF 265
            R   ++ P ++P+ + V +        +   L  +      + +    + + +     F
Sbjct: 265 DRQYEVYGPEWNPDSRAVTFEYNQRGHQVYRVLELSAETGKVRPLVEETSDKYVNYTRHF 324

Query: 266 S---SNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINIS-ASYSPDSSQIVFES 320
                +GK+ +   ++D    +Y  +  +     ++T   +          D+ QI F +
Sbjct: 325 RHDLKDGKQMIWMSERDNWNHLYMYNRITAQPDYQITKGEWYVREVLRVDEDNRQIYFSA 384

Query: 321 D--REGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +    G++    + Y +  +G     ++ ++        +S     + 
Sbjct: 385 NGMEAGEDPYLIRYYRIGFDGKGLTCLTPEEGMHRAW--FSEDMKYLV 430


>gi|220679189|emb|CAX13320.1| TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated
           factor [Danio rerio]
          Length = 756

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 71/200 (35%), Gaps = 22/200 (11%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS---NATERL 297
           +MD +     K +      +    FS +    L S  +D  + ++S+   +         
Sbjct: 483 IMDEKTSSESKILHGHSGPVYGVSFSPDRNYLL-SSSEDGTIRLWSLQTFTCLVGYKGH- 540

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSP 356
            N    +    +SP      F S   G +++  + + +     RI     A      + P
Sbjct: 541 -NYPVWDTQ--FSPFG--YYFVS--GGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHP 593

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG--- 412
             + +A T  S     +  +  +G+  R+       + +  +SP+G+ L  S   DG   
Sbjct: 594 NSNYVA-TGSSDRTVRLWDV-LNGNCVRIFTGHKGPIHSLAFSPNGKFLA-SGSTDGRVL 650

Query: 413 --DTGSKLYSIDLNGRNETL 430
             D G  L   +L G   T+
Sbjct: 651 LWDIGHGLMIAELKGHTGTI 670



 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 82/258 (31%), Gaps = 30/258 (11%)

Query: 142 KKFFSSPASWRK--------IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII---- 189
           + +  +P   RK        +    SDD+ + I  EK    S+IL      V G+     
Sbjct: 451 RVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTSSESKILHGHSGPVYGVSFSPD 510

Query: 190 KNSLCVMDRDG----ANIRYLT-----PSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +N L     DG     +++  T        +  +++ +FSP      Y            
Sbjct: 511 RNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWDTQFSP----FGYYFVSGGHDRVAR 566

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L  T   +  +      + +   RF  N      +   D  + ++ V L  N     T  
Sbjct: 567 LWATDHYQPLRIFAGHLADVTCTRFHPNSNYVA-TGSSDRTVRLWDV-LNGNCVRIFTGH 624

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++SP+     F +      ++ +            +    + +   +S  G++
Sbjct: 625 KGPIHSLAFSPNGK---FLASGSTDGRVLLWDIGHGLMIAELKGHTGTIYALKFSRDGEI 681

Query: 361 IAFTKFSGEKFAIGVMKK 378
           IA            VM+ 
Sbjct: 682 IASGSIDNTVRLWDVMRA 699



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 71/219 (32%), Gaps = 24/219 (10%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD   ++   +       ++   FSP++  +  ++ D    +R++ + T       + 
Sbjct: 482 RIMDEKTSSESKILHGHSGPVYGVSFSPDRNYLLSSSED--GTIRLWSLQTFTCLVGYKG 539

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            N+   +   +FS  G    +S   D    +++ D            L       + P+S
Sbjct: 540 HNYP--VWDTQFSPFG-YYFVSGGHDRVARLWATDH-YQPLRIFAGHLADVTCTRFHPNS 595

Query: 314 SQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--- 369
           + +    SDR     + +      +  RI    +       +SP G  +A     G    
Sbjct: 596 NYVATGSSDRT----VRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDGRVLL 651

Query: 370 ---KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 + + +  G           + A  +S  G  + 
Sbjct: 652 WDIGHGLMIAELKG-------HTGTIYALKFSRDGEIIA 683



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 13/165 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 541 NYPVWDT----QFSPFGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 596

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A  + D     RV L 
Sbjct: 597 YVATGSSDRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGSTDG----RVLLW 652

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           D         +      I A +FS +G+    S   D  + ++ V
Sbjct: 653 DIGHGLMIAELKGHTGTIYALKFSRDGEIIA-SGSIDNTVRLWDV 696


>gi|146185063|ref|XP_001030849.2| hypothetical protein TTHERM_01006570 [Tetrahymena thermophila]
 gi|146143193|gb|EAR83186.2| hypothetical protein TTHERM_01006570 [Tetrahymena thermophila SB210]
          Length = 4900

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 76/228 (33%), Gaps = 19/228 (8%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              S      +  +++ G  + Y   ++ Q +    FSP+ + +A ++ D           
Sbjct: 4369 TGSHDRTFKIWNVEQ-GFKLAYNIETQQQQILSIAFSPDGKYLASSSQDH---TCKIWNA 4424

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                    +I      + +  FS + K    +   D    I++V+        + + +  
Sbjct: 4425 VNGYEFINKIEGHTGEVKSVAFSPDNKYLA-TGSNDHTSRIWNVEKGFELINCIKDHMGY 4483

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIA 362
                ++S DS  +V  SD        V     G +   I +  ++      +S  G  + 
Sbjct: 4484 INQVAFSTDSKYVVTGSD---DYTCKVWNIEKGFELINIEEKHKSIVSAAAFSIDGQYLV 4540

Query: 363  FTKFSGEKFAIGVMKKDGSQE-----RLLVEDSNLQAPTWSPSGRSLI 405
               +  + F I     D  +E       +     ++  ++S  GR L 
Sbjct: 4541 TCSYD-KTFKIW----DAQKEFELINTKIAHTKTIKQVSFSQDGRYLA 4583



 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 75/223 (33%), Gaps = 28/223 (12%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G           QI+    FSP+ + +A +++D     +++ ++   D      G+   +
Sbjct: 4212 GFEFVNKIEGHTQIVQSVAFSPDGKYLATSSFD--QTYKIWNIEKGYDLVNTIQGHTDKI 4269

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIV 317
                 FSSN K    +   D+   I+ V  +      ++     +     S+S +   + 
Sbjct: 4270 TYI-TFSSNSKLLA-TASYDKTCKIWQV--EKGFELIISIETGTDWIPQLSFSTNGKYLA 4325

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIG-- 374
              S+    +   V       + + S +          +SP    +A T      F I   
Sbjct: 4326 GCSN---DKTCKVWNLENHFELQYSIEGHTGCVKSVAFSPDSKYLA-TGSHDRTFKIWNV 4381

Query: 375  ------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                      +  Q+++L       +  +SP G+ L  S +  
Sbjct: 4382 EQGFKLAYNIETQQQQIL-------SIAFSPDGKYLASSSQDH 4417



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/269 (13%), Positives = 88/269 (32%), Gaps = 58/269 (21%)

Query: 199  DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            +G  ++       Q +    FS + + +A  +   +D            +    I     
Sbjct: 1949 NGFKLKNSIQGHTQFILSSAFSADGKYLATGS---KDFTCNIWNLENGYQLINTINGHTD 2005

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN----TLFINISASYSPDSS 314
             I +  FS++GK    +  +D+   I+  ++Q+    +LTN          S ++S DS 
Sbjct: 2006 KIQSVDFSADGKYLA-TGSQDKTCKIW--NVQNG--FQLTNSIEGHNGGIFSVNFSADSK 2060

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
             +   SD +G  +++   +    Q + + +   S +   +S  G+ +A     G      
Sbjct: 2061 YLATGSD-DGTCKIW--NAENRFQLQNTIEG-HSVYSIDFSTDGNYLATGSQDGTCKIWN 2116

Query: 369  --EKFAI---------------------GVMKKDGSQERLLV-------------EDSNL 392
               +F +                      +    G   ++               +   +
Sbjct: 2117 LKNEFQLTNTIESSHGSNCLVAFSSDCNYLATGSGGTIKIWNAENGFQLMNTINGDTDAI 2176

Query: 393  QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +  +SP  + L     +  +   K++ +
Sbjct: 2177 YSLAFSPDSKYLAIGCFQLSEISCKIWDV 2205



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 97/262 (37%), Gaps = 21/262 (8%)

Query: 156  HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR----------DGANIRY 205
            H  +DDIY  +      + + ++ +S++         L               +G  + Y
Sbjct: 4073 HFGTDDIYSFMQAI--FYKNTLVTISKTASLTPDGKYLAAQSSGNTCKIWNIENGLELVY 4130

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                    ++   FS + + +A ++ D      ++ ++   +          S      F
Sbjct: 4131 TIQEHKGDIYSICFSNDGKYLATSSED--KTCMIWNVEKGFELLQTIEEKDHSFFQYVSF 4188

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S NG+  + ++ +D +  I+S++       ++     I  S ++SPD   +   S  +  
Sbjct: 4189 SQNGQYLV-TISRDISCKIWSIEKGFEFVNKIEGHTQIVQSVAFSPDGKYLA-TSSFDQT 4246

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             +++ ++  G D     Q          +S    L+A   +  +   I  ++K G +  +
Sbjct: 4247 YKIWNIE-KGYDLVNTIQGHTDKITYITFSSNSKLLATASYD-KTCKIWQVEK-GFELII 4303

Query: 386  LVEDSNLQAP--TWSPSGRSLI 405
             +E      P  ++S +G+ L 
Sbjct: 4304 SIETGTDWIPQLSFSTNGKYLA 4325



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 88/278 (31%), Gaps = 38/278 (13%)

Query: 162  IYQSITG--EKGDFNSRILFVSESVVSGIIKNSLCVMDR---------DGANIRYLTPSR 210
            IY   T    +   + R + +S S +S   K    V D          +G  +       
Sbjct: 1815 IYDFQTHSIIESIKDCRNIDLSISSLSPNCKYLATVSDYKNCKIWNLENGFQLIKTIEGH 1874

Query: 211  DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             + +    FS + + +A  +   +D            +    I   +  I +  FS++GK
Sbjct: 1875 QRSISSITFSADGKYLATGS---KDSTCQIWNAENDFQLQNTIEGHKQYIYSVAFSADGK 1931

Query: 271  RALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDREGKE 326
                +  +D++  I+  D+++    +L N++  +     S+++S D   +   S      
Sbjct: 1932 YLA-TSSEDDSCKIW--DIENG--FKLKNSIQGHTQFILSSAFSADGKYLATGSK---DF 1983

Query: 327  QLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
               +       Q   + +          +S  G  +A            V        +L
Sbjct: 1984 TCNIWNLENGYQLINTINGHTDKIQSVDFSADGKYLATGSQDKTCKIWNVQN----GFQL 2039

Query: 386  LV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                   +  + +  +S   + L        D   K++
Sbjct: 2040 TNSIEGHNGGIFSVNFSADSKYLATGSD---DGTCKIW 2074



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 84/240 (35%), Gaps = 21/240 (8%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G    +  + +    N   L    ++      FS + +      Y   ++  V+ ++  
Sbjct: 2324 TGSENFTCKIWNA--ENGFQLINKIEKEAEVAAFSVDGK------YFINNMCDVWNVENG 2375

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFI 303
              +  K I      I +  FS++GK   +    D    I++V+        L       I
Sbjct: 2376 F-QLIKNIEGHPGQINSVAFSADGKYLAV-GTYDYTCQIWNVENGFKPINTLETGYVRAI 2433

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            N S ++SP+   +   +  +   Q++ +++      +I            +S     +A 
Sbjct: 2434 N-SIAFSPNGKYLA-TAAYDNPFQIWNVENGFQLINKIEVPPRHIIVSIAFSADSKYLA- 2490

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            T    +   I  ++ +G Q    +E     + +  +S  G+ L        D   K++ +
Sbjct: 2491 TGSHDKTCKIWSVE-NGFQLINTIEGHTKLITSIAFSADGKYLATGSH---DNTCKIWDV 2546



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 79/230 (34%), Gaps = 25/230 (10%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYD--------DEDILRVYLMDTRIDRAPK 251
            G ++          +    FS N + +A A+YD        ++    +  ++T  D  P+
Sbjct: 4255 GYDLVNTIQGHTDKITYITFSSNSKLLATASYDKTCKIWQVEKGFELIISIETGTDWIPQ 4314

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                         FS+NGK        D+   +++++        +        S ++SP
Sbjct: 4315 L-----------SFSTNGKYLA-GCSNDKTCKVWNLENHFELQYSIEGHTGCVKSVAFSP 4362

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            DS  +      +   +++ ++        I   ++       +SP G  +A +       
Sbjct: 4363 DSKYLA-TGSHDRTFKIWNVEQGFKLAYNIETQQQQ-ILSIAFSPDGKYLASSSQDHTCK 4420

Query: 372  AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                +       ++      +++  +SP  + L        D  S+++++
Sbjct: 4421 IWNAVNGYEFINKIEGHTGEVKSVAFSPDNKYLATGSN---DHTSRIWNV 4467



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 74/215 (34%), Gaps = 20/215 (9%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            I+ +       +    FS N + +A  + D  +  +++ +D       K +      IL 
Sbjct: 4603 IKTIEQGHTGSILTVAFSSNSRYLATGSQD--NTCKIWDVDNEF-ELIKSLQGHTGEILK 4659

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVF 318
              FS + K    +  +D    I++V+       +L  T+  +  +    ++S D     F
Sbjct: 4660 VCFSIDEKYLA-TCSQDNTCRIWNVE----NEFQLYITIEAHTESIACINFSRDGR---F 4711

Query: 319  ESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             +         +       Q   + +  A  +    +S     +    F      I  ++
Sbjct: 4712 FATGSWDYTCKIWDVKNGFQLMYTLEGYAEGFSALAFSKDSKYLVTGSFD-SNCKIWDIQ 4770

Query: 378  KDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            K G     ++    + + +  +SP G+ L  S+  
Sbjct: 4771 K-GFVLINIIHTYYTFIHSIQFSPDGKYLTISQNS 4804


>gi|27380596|ref|NP_772125.1| hypothetical protein bll5485 [Bradyrhizobium japonicum USDA 110]
 gi|27353761|dbj|BAC50750.1| bll5485 [Bradyrhizobium japonicum USDA 110]
          Length = 489

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 95/275 (34%), Gaps = 27/275 (9%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D K ++   F ++   W  +A   ++ + +      G  N+        + +      + 
Sbjct: 101 DGKTVLSGSFDTAAIRW-SLATESAEQVLRF---HSGAVNAAAFLGDGRMATAGADGQIA 156

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +    G     +       +     SP+  K+A A++D         + +  D   + + 
Sbjct: 157 IWTAGGLQPDQVLEGHTGPIVGLVVSPDTSKLASASWDH-----TVRISSLSDGGTRVLQ 211

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                +    F+ +GK  + SV  D  + I+   L   + E +     +N  A  SPD  
Sbjct: 212 GHSQSVNGVAFAPDGKSLV-SVGYDLTVRIW--PLAGGSPEIVVMPAPLNAVA-ISPDGE 267

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +      +GK  L +M ++G +   +             S  G LIA     G    + 
Sbjct: 268 IV--TGAADGK--LRMMTADGKENGEV-MAGARPIVALAISQDGALIATGAIDGT---VA 319

Query: 375 VMKKDGSQERLLVEDSNLQAPTWS----PSGRSLI 405
           ++ +        +    L AP WS    P G +L+
Sbjct: 320 IVDRKARSVMRTLAG--LGAPVWSVAFLPDGATLL 352



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 68/185 (36%), Gaps = 15/185 (8%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           ++      + A   SS+GK  L S   D A   +S+  +S A + L        +A++  
Sbjct: 85  QLAGHGGPVRAIAVSSDGKTVL-SGSFDTAAIRWSLATES-AEQVLRFHSGAVNAAAFLG 142

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D       +D     Q+ +  + G    ++ +         V SP    +A   +     
Sbjct: 143 DGRMATAGAD----GQIAIWTAGGLQPDQVLEGHTGPIVGLVVSPDTSKLASASWD---H 195

Query: 372 AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            + +        R+L     ++    ++P G+SL+       D   +++   L G +  +
Sbjct: 196 TVRISSLSDGGTRVLQGHSQSVNGVAFAPDGKSLV---SVGYDLTVRIW--PLAGGSPEI 250

Query: 431 INTPA 435
           +  PA
Sbjct: 251 VVMPA 255


>gi|85704204|ref|ZP_01035307.1| WD domain/cytochrome c family protein [Roseovarius sp. 217]
 gi|85671524|gb|EAQ26382.1| WD domain/cytochrome c family protein [Roseovarius sp. 217]
          Length = 436

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 68/215 (31%), Gaps = 21/215 (9%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              D   V + D        R+   +  I A   S +G+    S   D ++ I+   +  
Sbjct: 86  SGGDDFAVIVWDMATG-LGTRLEGHKGKIAALDVSPDGQWIA-SASWDGSIGIW--PVAG 141

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                LT         ++  D + +++ S  +G  + +     G+  + +          
Sbjct: 142 GKGRFLTGHDGAVSDVAFGRDGA-LLYSSSADGSLREWRWHEAGAAPREVLNQGFG-INR 199

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF----S 407
            V  P    +A+    G      V+       + + + +  + P  S     L +    +
Sbjct: 200 IVLGPDDAWLAYGAVDGAT---RVVDPRSG--QQIADFTLERRPVLS-----LAYHAATA 249

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           +   GD    +  ID      T  +  A A  P W
Sbjct: 250 QLAAGDGQGYIMVIDTEDWMITR-DFQAMARGPVW 283



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 48/158 (30%), Gaps = 10/158 (6%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           V   +   +   D+ +    RL        +   SPD   I   S  +G   ++ +    
Sbjct: 85  VSGGDDFAVIVWDMATGLGTRLEGHKGKIAALDVSPDGQWIASAS-WDGSIGIWPVA--- 140

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
             + R     + +  D  +   G L+  +   G        +   +   +L +   +   
Sbjct: 141 GGKGRFLTGHDGAVSDVAFGRDGALLYSSSADGSLREWRWHEAGAAPREVLNQGFGINRI 200

Query: 396 TWSPSGRSLIF------SRKKDGDTGSKLYSIDLNGRN 427
              P    L +      +R  D  +G ++    L  R 
Sbjct: 201 VLGPDDAWLAYGAVDGATRVVDPRSGQQIADFTLERRP 238


>gi|166713719|ref|ZP_02244926.1| dipeptidyl peptidase IV [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 745

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 97/315 (30%), Gaps = 69/315 (21%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--- 217
              + +T  +G      L      VS + + ++ V+D    N   LT    + +      
Sbjct: 142 AAVRKLTHGEGFATDAKLSPKGGFVSFVRERNVWVIDLASGNALQLTHDGSETIGNGVAE 201

Query: 218 -------------RFSPNQQKVAYATYDDEDIL-----RVYLMDTR-IDRAPKRIGNFRS 258
                         ++P+   +A+A  D+  +       VY   T  I +   + G   +
Sbjct: 202 FVADEEMDRHTGYWWAPDDSAIAFARIDESHVPVQKRPEVYADHTEVISQRYPQAGQPNA 261

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            +     +   K A   +   +  DIY   +     +RLT           S D   +  
Sbjct: 262 AVQLGVIAPRAKAAARWIDLGKNPDIYLARVDWRDAQRLTFQRQ-------SRDQKTL-- 312

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP---------QGDLIAFTKFSGE 369
                  E +    ++G+ +  I++        P W P          G  + +      
Sbjct: 313 -------ELIETTLASGAQRTLITE------TSPTWVPLSNDLRFLKDGRFL-WNSERSG 358

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG--------RSLIFSRKKDGDTGSKLYSI 421
              + +  +DG     L   +      W   G          + F+  KDG T + +Y++
Sbjct: 359 YAHVYLASEDGRTLTPLTSGN------WVVDGLLAVDETAGMVYFAASKDGPTQTHIYAV 412

Query: 422 DL-NGRNETLINTPA 435
            L  G  E    T  
Sbjct: 413 PLAGGAIEKRSVTNG 427



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 42/215 (19%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             L +P+ +P+  +V +      D  ++ L +  I     R+     ++L          
Sbjct: 37  PTLMKPKVAPDGSRVTFLRGKGGDRNQLDLWEYDIASGQTRLLVDSKVVL---------- 86

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                       +  V+      +R+     I +   ++PD+  ++F     G+  LY +
Sbjct: 87  -------PGTEVLSDVEKARRERQRIAALTGI-VDYQWAPDAHALLFPL--GGELYLYDL 136

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS- 390
           +  G+   R     E    D   SP+G  ++F +       + V+         L  D  
Sbjct: 137 RKTGAAAVRKLTHGEGFATDAKLSPKGGFVSFVRER----NVWVIDLASGNALQLTHDGS 192

Query: 391 -----------------NLQAPTWSPSGRSLIFSR 408
                                  W+P   ++ F+R
Sbjct: 193 ETIGNGVAEFVADEEMDRHTGYWWAPDDSAIAFAR 227


>gi|39948719|ref|XP_363124.1| hypothetical protein MGG_08708 [Magnaporthe oryzae 70-15]
 gi|145009253|gb|EDJ93964.1| hypothetical protein MGG_08708 [Magnaporthe oryzae 70-15]
          Length = 526

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/313 (12%), Positives = 95/313 (30%), Gaps = 61/313 (19%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           ++AH I         GE           S  + +G   N+  + D +    ++       
Sbjct: 143 RLAHRIP------GHGEPILCAQFSPASSARLATGSGDNTARIWDAETGTPKHTLKGHAG 196

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS----- 267
            +    +SP+  ++A  + D    +R++  +T      +  G+ +  +    +       
Sbjct: 197 WVLGVSWSPDGTRLATCSMD--KTVRIWDPETGKQVGSELKGHAK-WVQGIAWEPLHLWR 253

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP-DSSQIVFESDREGKE 326
           +G   L+S  KD    I++V+        L+          +   + + +V+ +  +  +
Sbjct: 254 DGTPRLVSASKDFTARIWTVN-TGRTEHVLSGHKGSVSCVRWGAGNGTGVVYTASHD--K 310

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ----------------------------- 357
            + V  +         +           S                               
Sbjct: 311 TVKVWDAVKGTLLHDLKSHAHWVNHLALSTDFVCRTGFFDHTKTVPATAEEKTAKAKERY 370

Query: 358 -------GDLIAFTKFSGEKFAIGVMKK--DGSQE--RLLVEDSNLQAPTWSPSGRSLIF 406
                  G ++     + + F + +     DG++   R++     +   T+SP G  +  
Sbjct: 371 EKAARVGGKIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIA- 429

Query: 407 SRKKDGDTGSKLY 419
                 D  +KL+
Sbjct: 430 --SAGWDNATKLW 440



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 52/139 (37%), Gaps = 8/139 (5%)

Query: 180 VSESVVSGIIKNSLCVMDR--DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           + E +VS     ++ + D   DG           + +    FSP+   +A A +D+    
Sbjct: 380 IVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIASAGWDN---- 435

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
              L + R  +    +    + +    FS++  R L++  KD  + +++V         L
Sbjct: 436 ATKLWNARDGKFINTLRGHVAPVYQCSFSAD-SRLLVTASKDTTLKVWNV-RTGKLATDL 493

Query: 298 TNTLFINISASYSPDSSQI 316
                      +SPD  ++
Sbjct: 494 PGHEDEVYGVDWSPDGQRV 512



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 41/141 (29%), Gaps = 7/141 (4%)

Query: 223 QQKVAYATYDDEDILRVYLMD--TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
             K+        D   +YL D      +   R+   +  +    FS +G     S   D 
Sbjct: 377 GGKIVERLVSASDDFTMYLFDPLNDGTKPIARMIGHQKQVNHVTFSPDGSMIA-SAGWDN 435

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A  +++          L   +      S+S DS  +V  S       L V          
Sbjct: 436 ATKLWNA-RDGKFINTLRGHVAPVYQCSFSADSRLLVTASK---DTTLKVWNVRTGKLAT 491

Query: 341 ISQDKEASYFDPVWSPQGDLI 361
                E   +   WSP G  +
Sbjct: 492 DLPGHEDEVYGVDWSPDGQRV 512



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 45/147 (30%), Gaps = 17/147 (11%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A +SP SS  +      G     +  +     K   +          WSP G  +A    
Sbjct: 158 AQFSPASSARLATG--SGDNTARIWDAETGTPKHTLKGHAGWVLGVSWSPDGTRLATCSM 215

Query: 367 SGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSP-----SGR-SLIFSRKKDGDTGSK 417
                 + +   +  ++    L      +Q   W P      G   L+ + K   D  ++
Sbjct: 216 DKT---VRIWDPETGKQVGSELKGHAKWVQGIAWEPLHLWRDGTPRLVSASK---DFTAR 269

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           +++++       L       S  +W  
Sbjct: 270 IWTVNTGRTEHVLSGHKGSVSCVRWGA 296


>gi|157109057|ref|XP_001650506.1| hypothetical protein AaeL_AAEL005208 [Aedes aegypti]
 gi|13173173|gb|AAK14330.1|AF326339_1 unknown protein i8 [Aedes aegypti]
 gi|108879158|gb|EAT43383.1| conserved hypothetical protein [Aedes aegypti]
          Length = 335

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 62/181 (34%), Gaps = 10/181 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S   K SL  ++  G   + L P   +      +SP+ + +A    D      + + D 
Sbjct: 150 GSHEGKISLYSVES-GKPEQVLDPQNGKFTLSIAYSPDGKYIASGAIDG----IINIFDV 204

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  + +      + +  FS +  + L++   D  M +Y V   S+    L+      
Sbjct: 205 AAGKVAQTLEGHAMSVRSLCFSPD-SQMLLTASDDGHMKLYDV-AHSDVVGTLSGHSSWV 262

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S S+S D     F S    K  + +            +D +   +   +SP    +   
Sbjct: 263 LSVSFSGDGKS--FTSSSSDKT-VKIWNVAERQCLHTFEDHQDQVWGVKYSPDSSKVISV 319

Query: 365 K 365
            
Sbjct: 320 S 320



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 66/190 (34%), Gaps = 17/190 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           RV + D   +   K    F      +++   SS+G+    S   D  + I+  D      
Sbjct: 68  RVKVWDVTKENKLKLRNTFTGHSLGVVSVDVSSDGEVIA-SSSLDSGLCIWKAD-SGQLL 125

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPV 353
            +++       + ++SP    I+  S      ++ +        +++   +   +     
Sbjct: 126 NQISLGPVDLWTVAFSPCDKYIISGSHEG---KISLYSVESGKPEQVLDPQNGKFTLSIA 182

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKD 411
           +SP G  IA     G    I +      +    +E   +   +  +SP  + L+ +    
Sbjct: 183 YSPDGKYIASGAIDG---IINIFDVAAGKVAQTLEGHAMSVRSLCFSPDSQMLLTASD-- 237

Query: 412 GDTGSKLYSI 421
            D   KLY +
Sbjct: 238 -DGHMKLYDV 246


>gi|157373953|ref|YP_001472553.1| peptidase S9B dipeptidylpeptidase IV subunit [Shewanella sediminis
           HAW-EB3]
 gi|157316327|gb|ABV35425.1| peptidase S9B, dipeptidylpeptidase IV domain protein [Shewanella
           sediminis HAW-EB3]
          Length = 765

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 75/222 (33%), Gaps = 41/222 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDR-------------------------APKR 252
            +SP++  +AY   D+ D+  V   +   D                            K+
Sbjct: 240 WWSPDESAIAYTRIDESDVELVTRNEIYADGIKLTEQRYPYAGKNNVKISLGIVKLTSKK 299

Query: 253 IGNFR----SMILAPR--FSSNGKRALISVQKDEA--MDIYSVDLQ-SNATERLTNTLFI 303
           +          I  PR  +  + KR     Q  +   +D+  VD++ ++ ++ L      
Sbjct: 300 VSWVELGKEQDIYLPRVKWLPDSKRLSYQWQSRDQQVLDLRLVDIERTDTSKNLVEERSD 359

Query: 304 -----NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                N    +       ++ S+R G   LY++  +G  +K+++              +G
Sbjct: 360 AWVNLNNDLHFLKQQESFIWASERNGFNHLYLINLDGEVKKQLTSGGWVVDGVEFVDEKG 419

Query: 359 DLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             I FT       +  +  +   G +   + +   + +P ++
Sbjct: 420 GWIYFTGRKDTAVEQHLYRVALTGGEIEGVSQRRGMHSPVFA 461



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 86/293 (29%), Gaps = 78/293 (26%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + Q +            V    +  D     +          R S  GK       +
Sbjct: 144 WSDDSQAILIPASG------VLYYYSLSDNKVTLLPTGDGFATDARLSPKGKYVSFVRDQ 197

Query: 279 DEAMDIYSVDLQSNATERLTNTLF-----------------INISASYSPDSSQIVFE-- 319
           +    ++ + L+  +   +T                           +SPD S I +   
Sbjct: 198 N----LFVLTLKDMSLVEMTTDGGGAIKNAMAEFVAQEEMDRMTGYWWSPDESAIAYTRI 253

Query: 320 --SDRE----------------------GKEQ----LYVMQSNGSDQKRISQDKEASYFD 351
             SD E                      GK      L +++        +   KE   + 
Sbjct: 254 DESDVELVTRNEIYADGIKLTEQRYPYAGKNNVKISLGIVKLTSKKVSWVELGKEQDIYL 313

Query: 352 PV--WSPQGDLIAFT--KFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSL-- 404
           P   W P    +++       +   + ++  + +   + LVE+ +      +     L  
Sbjct: 314 PRVKWLPDSKRLSYQWQSRDQQVLDLRLVDIERTDTSKNLVEERSDAWVNLNNDLHFLKQ 373

Query: 405 ----IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ--------WVGF 445
               I++ +++G   + LY I+L+G  +  + +  +  D          W+ F
Sbjct: 374 QESFIWASERNG--FNHLYLINLDGEVKKQLTSGGWVVDGVEFVDEKGGWIYF 424



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 69/206 (33%), Gaps = 51/206 (24%)

Query: 261 LAPR---FSSNGKRALISVQKDEA---MDIYSVDLQSNATE------RLTNTLFIN---- 304
            +PR    S +GKR      + +     D++ ++++S          +LT     +    
Sbjct: 68  TSPRGLKLSPDGKRVTYLAGRQDNQHFYDLWQMNVESGKQSILLDADKLTIGELSDEEKA 127

Query: 305 ------------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                       +   +S DS  I+  +       LY    + +    +    +    D 
Sbjct: 128 RRERQRIYGQGIMEYFWSDDSQAILIPA----SGVLYYYSLSDNKVTLL-PTGDGFATDA 182

Query: 353 VWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLV--------EDSNLQAPTWS 398
             SP+G  ++F +         +  ++  M  DG               E   +    WS
Sbjct: 183 RLSPKGKYVSFVRDQNLFVLTLKDMSLVEMTTDGGGAIKNAMAEFVAQEEMDRMTGYWWS 242

Query: 399 PSGRSLIFSRKKDGD----TGSKLYS 420
           P   ++ ++R  + D    T +++Y+
Sbjct: 243 PDESAIAYTRIDESDVELVTRNEIYA 268



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 55/193 (28%), Gaps = 47/193 (24%)

Query: 220 SPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------------- 264
           SP+ ++V Y     D++    ++ M+    +    +   +  I                 
Sbjct: 76  SPDGKRVTYLAGRQDNQHFYDLWQMNVESGKQSILLDADKLTIGELSDEEKARRERQRIY 135

Query: 265 --------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                   +S + +  LI         +Y   L  N    L         A  SP    +
Sbjct: 136 GQGIMEYFWSDDSQAILIPASG----VLYYYSLSDNKVTLLPTGDGFATDARLSPKGKYV 191

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQGDL 360
            F  D    + L+V+         ++ D   +  + +                WSP    
Sbjct: 192 SFVRD----QNLFVLTLKDMSLVEMTTDGGGAIKNAMAEFVAQEEMDRMTGYWWSPDESA 247

Query: 361 IAFTKFSGEKFAI 373
           IA+T+       +
Sbjct: 248 IAYTRIDESDVEL 260


>gi|312073506|ref|XP_003139550.1| TBL1X protein [Loa loa]
 gi|307765282|gb|EFO24516.1| TBL1X protein [Loa loa]
          Length = 697

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 85/239 (35%), Gaps = 51/239 (21%)

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA---SWRKIAHTIS 159
           WN  G       +++  G D+  +   +WD     Q+   +F SS A    W      +S
Sbjct: 457 WNQKG------DKILSAGVDKTTI---VWDPLKGIQVQVFQFHSSSALDVDW------MS 501

Query: 160 DDIYQSITGEK-------GDFNSRILFVSESVVSGIIKNSLC--------------VMDR 198
           DD + S + +        G       F   +     +K  +               V   
Sbjct: 502 DDTFASCSTDMCIHVCKLGCEKPLKTFQGHTNEVNAVKYDVYSRLLASCSDDMTLKVWSM 561

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           +  N+ +   + D+ ++  R+SP    +A A++D      V L D       + +     
Sbjct: 562 NYENVVHNLKAHDKEIYTIRWSPVGYTLASASFDH----TVRLWDIERGMCVRTLTKHTE 617

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-----LTNTLFINISASYSPD 312
            + +  FS +GK    S   D ++ I+  D+QS    +     L++     +  ++  D
Sbjct: 618 PVYSVGFSPDGKYIA-SGSFDRSVYIW--DVQSGKLIQSHTGSLSDGGIFEVGWNFRGD 673



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 77/255 (30%), Gaps = 27/255 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G       V   DG  +RY   +    +F  +++    K+  A  D        + D  
Sbjct: 425 TGCYDGYARVWATDG-RLRYTLGAHKGPIFALKWNQKGDKILSAGVDK----TTIVWDPL 479

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--I 303
                +      S  L   + S+   A  S   D  + +  +       + L        
Sbjct: 480 KGIQVQVFQFHSSSALDVDWMSDDTFA--SCSTDMCIHVCKL----GCEKPLKTFQGHTN 533

Query: 304 NISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            ++A  Y   S  +   SD      L V   N  +     +  +   +   WSP G  +A
Sbjct: 534 EVNAVKYDVYSRLLASCSD---DMTLKVWSMNYENVVHNLKAHDKEIYTIRWSPVGYTLA 590

Query: 363 FTKFSGEKFAIGVMKKDGSQ-ERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              F      + +   +     R L      + +  +SP G+ +       G     +Y 
Sbjct: 591 SASFD---HTVRLWDIERGMCVRTLTKHTEPVYSVGFSPDGKYIA-----SGSFDRSVYI 642

Query: 421 IDLNGRNETLINTPA 435
            D+        +T +
Sbjct: 643 WDVQSGKLIQSHTGS 657


>gi|317475272|ref|ZP_07934538.1| dipeptidyl peptidase IV [Bacteroides eggerthii 1_2_48FAA]
 gi|316908526|gb|EFV30214.1| dipeptidyl peptidase IV [Bacteroides eggerthii 1_2_48FAA]
          Length = 738

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 40/176 (22%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++ ++   ++     + V          P +  +        RFS +G + LI+ +    
Sbjct: 59  DKTQIIKYSFKTGKPVEVLFDAATARECPFKKFDSY------RFSPDGSKLLIATETTPI 112

Query: 282 MD--------IYSV--DLQSN---ATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                     IYS+  +L        E+L++         +SPD  Q+ F  D       
Sbjct: 113 YRRSYTAVHYIYSLKRNLDGKINNVVEKLSDG-GPQQIPVFSPDGYQVAFVRD---NNIF 168

Query: 329 YVMQSNGSDQKRISQDKEAS---YFDPVW--------------SPQGDLIAFTKFS 367
            V    G+ + ++++D + +      P W              SP   ++AF +F 
Sbjct: 169 LVKLLYGNSESQVTEDGKRNEVLNGIPDWVYEEEFAFNRALEFSPDSKMLAFIRFD 224



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 57/168 (33%), Gaps = 37/168 (22%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYL-----------MDTRIDRAPKRIGNFRSMILAPRFS 266
           RFSP+  K+  AT       R Y            +D +I+   +++ +     + P FS
Sbjct: 95  RFSPDGSKLLIATETTPIYRRSYTAVHYIYSLKRNLDGKINNVVEKLSDGGPQQI-PVFS 153

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------------------FINISAS 308
            +G +      +D  + +  + L  N+  ++T                       N +  
Sbjct: 154 PDGYQVAFV--RDNNIFLVKL-LYGNSESQVTEDGKRNEVLNGIPDWVYEEEFAFNRALE 210

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS----QDKEASYFDP 352
           +SPDS  + F    E +   Y       +   ++       E +Y  P
Sbjct: 211 FSPDSKMLAFIRFDEKEVPSYTFPVFAGEAPHMTPYEKYPGEYTYKYP 258



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 42/145 (28%), Gaps = 30/145 (20%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDP-------VWSPQGDLI--------AFTKFSGE 369
           K Q+            +  D   +   P        +SP G  +         + +    
Sbjct: 60  KTQIIKYSFKTGKPVEVLFDAATARECPFKKFDSYRFSPDGSKLLIATETTPIYRRSYTA 119

Query: 370 KFAIGVM--KKDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY----- 419
              I  +    DG        L +    Q P +SP G  + F R  +      LY     
Sbjct: 120 VHYIYSLKRNLDGKINNVVEKLSDGGPQQIPVFSPDGYQVAFVRDNNIFLVKLLYGNSES 179

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+   ++N       P WV 
Sbjct: 180 QVTEDGKRNEVLN-----GIPDWVY 199



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 2/119 (1%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F S++ G   LY     G+  K+++           + P+ D   F+          + K
Sbjct: 357 FVSEKSGYNHLYWYSIGGNLIKQVTSGPYEVQDFLGYDPEDDCFYFSSNEESPLRSAIYK 416

Query: 378 KDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            D   +++ L   +   +  +S   +  + +R  + DT + +   D  G+  T +   A
Sbjct: 417 IDRKGKKIKLSSQAGTNSAQFSTDMKYFM-NRYSNLDTPTVITLNDNTGKTLTTLVDNA 474


>gi|200388368|ref|ZP_03214980.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|199605466|gb|EDZ04011.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
          Length = 408

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGRIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGRIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 404



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        RID    R  N  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGRIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|168260408|ref|ZP_02682381.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|205350123|gb|EDZ36754.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 408

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 50/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGRIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGRIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 404



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        RID    R  N  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGRIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|329962413|ref|ZP_08300413.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           fluxus YIT 12057]
 gi|328529969|gb|EGF56857.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           fluxus YIT 12057]
          Length = 736

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 58/176 (32%), Gaps = 40/176 (22%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV----- 276
           +  ++   ++     + V          P +  +  S      FS +G + LI+      
Sbjct: 59  DGTQIIKYSFKTGKPVEVLFDAATARECPFKTFDSYS------FSPDGGKLLIATKTTPI 112

Query: 277 ---QKDEAMDIYSV--DLQSN---ATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                     +YS+  +L        E+L++         +SPD + + F  D       
Sbjct: 113 YRHSYTAVHYLYSLKRNLDGKINNVVEKLSDG-GPQQVPVFSPDGNMVAFVRD---NNIF 168

Query: 329 YVMQSNGSDQKRISQDKEASY---FDPVW--------------SPQGDLIAFTKFS 367
            V    G+ + ++++D + +      P W              S    +IAF +F 
Sbjct: 169 LVKLLYGNSESQVTEDGKRNAVLNGIPDWVYEEEFSFNRALEFSADSKMIAFIRFD 224



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 50/153 (32%), Gaps = 28/153 (18%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-------- 361
           + D +QI+  S + GK    +  +  + +         ++    +SP G  +        
Sbjct: 57  NADGTQIIKYSFKTGKPVEVLFDAATARE-----CPFKTFDSYSFSPDGGKLLIATKTTP 111

Query: 362 AFTKFSGEKFAIGVM--KKDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            +         +  +    DG        L +    Q P +SP G  + F R  +     
Sbjct: 112 IYRHSYTAVHYLYSLKRNLDGKINNVVEKLSDGGPQQVPVFSPDGNMVAFVRDNNIFLVK 171

Query: 417 KLY-----SIDLNGRNETLINTPAYASDPQWVG 444
            LY      +  +G+   ++N       P WV 
Sbjct: 172 LLYGNSESQVTEDGKRNAVLN-----GIPDWVY 199



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 53/168 (31%), Gaps = 37/168 (22%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYL-----------MDTRIDRAPKRIGNFRSMILAPRFS 266
            FSP+  K+  AT         Y            +D +I+   +++ +     + P FS
Sbjct: 95  SFSPDGGKLLIATKTTPIYRHSYTAVHYLYSLKRNLDGKINNVVEKLSDGGPQQV-PVFS 153

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------------------FINISAS 308
            +G        +D  + +  + L  N+  ++T                       N +  
Sbjct: 154 PDGNMVAFV--RDNNIFLVKL-LYGNSESQVTEDGKRNAVLNGIPDWVYEEEFSFNRALE 210

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS----QDKEASYFDP 352
           +S DS  I F    E +   Y       +   I+       E +Y  P
Sbjct: 211 FSADSKMIAFIRFDETEVPSYTFPVFAGEAPHIAAYEKYPGEYTYKYP 258


>gi|218442436|ref|YP_002380757.1| hypothetical protein PCC7424_5355 [Cyanothece sp. PCC 7424]
 gi|218175207|gb|ACK73938.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 1411

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 51/356 (14%), Positives = 108/356 (30%), Gaps = 63/356 (17%)

Query: 110  VLVTGRVIKEGKDRLRVEFRLWDV--KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
             L TG +    +       RLW++     + + G +        R +A     +  QS  
Sbjct: 1000 FLATGSLDSNDRGPEEYNVRLWELSSYTTEVLKGHRHS---KQLRCLA--FCPNPNQSDL 1054

Query: 168  GEKGDFNSRILFVSESVVS-----GIIKNSLCVMDRDGANIRYLTPSRDQ---------- 212
               G  +  I F + +           +N +  +  +  N      S D           
Sbjct: 1055 LVSGGDDRSIKFWNVTEHKCEKTVQGFRNRIWSVVFNFTNSMIACSSEDNQIHLWNKSEQ 1114

Query: 213  --------------ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
                           ++   FSPN   +A    D     +V L +         +    +
Sbjct: 1115 QTWKFFKSLSGHTDSVWSVAFSPNDHWLASGCEDG----QVRLWNLETGNYI-LLKGHNN 1169

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFIN-----ISASYSP 311
             +    FS +GK            D   +  ++++    +  +          +S ++S 
Sbjct: 1170 RVRIVVFSPDGKWLA-----GGGNDRSVILWNVETGEIFQKLDEEHNGHQRRVLSITFSS 1224

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEK 370
            D   I   S R+   +++ + S       I  + +       +SP   +L+    F    
Sbjct: 1225 DGQFIA-SSSRDQTIRVWDLNSPTIGPMVILNEHKDQVHSIAFSPQDSNLLVSGSFDKT- 1282

Query: 371  FAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              + +     S      E     + +  ++P+G+ +        D   +L+ I+ N
Sbjct: 1283 --VKLWDVANSNVIKTFEGHKKGVLSVAFAPNGQIVA---SGGHDQTIRLWDINGN 1333



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 96/248 (38%), Gaps = 20/248 (8%)

Query: 186  SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +G     L V   +D   I+ L  +    ++   F P  +K  + +  ++  +R++  D 
Sbjct: 783  TGEGNGDLRVWRIKDLTQIQMLKKAHISQVWAVAFHP--KKNLFVSGSEDGTVRLWRWDE 840

Query: 245  RIDRAPKRIGN--FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                +P+ + +   +S + A  FS +G    I+   D+ + ++         +       
Sbjct: 841  ENAHSPQNLESQQLQSSVRAIAFSRDGGFLAIA--NDQCITLWDFRGDDTPIKYFNTLPI 898

Query: 303  INISA-SYSP--DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQ 357
              +SA +++   D+  I+    + G   LY ++      K++ Q K  +       ++P 
Sbjct: 899  AEVSAIAFAQTKDNVSILATGSQNGTVSLYNVR----SAKQLGQSKHHNEIIRSLSFNPT 954

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTG 415
             D +A     G      +     S  ++L +     + A ++S  G+ L        D G
Sbjct: 955  NDTLATASEDGTVHFWDIGNL--SSYQVLKDPFMRKIWALSFSQDGKFLATGSLDSNDRG 1012

Query: 416  SKLYSIDL 423
             + Y++ L
Sbjct: 1013 PEEYNVRL 1020


>gi|260911408|ref|ZP_05917999.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634455|gb|EEX52554.1| OmpA family protein [Prevotella sp. oral taxon 472 str. F0295]
          Length = 686

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 62/186 (33%), Gaps = 27/186 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQL 328
             +S + D+        +Q        NT +   + ++SPD   + F    +D       
Sbjct: 203 IFVSERDDKGKWSKPEPVQGGL-----NTEYDEGACTFSPDQRTMYFTQCTTDPNYPRYA 257

Query: 329 YVMQSNGSDQKR-------ISQDKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKK 378
            VM S  SD          IS+D  +S+  P  SP G  + F            +  ++ 
Sbjct: 258 QVMTSARSDAAWAKATKLDISKDTLSSFAHPAVSPDGQWLYFVSDMPGGQGGQDLWRIRL 317

Query: 379 DGSQE-------RLLVEDSNLQAPTWSPSGRSLIFSRKKD-GDTGSKLYSIDLNGRNETL 430
             +           +    N   PT+ P+G  L FS     G  G  +Y    N   +  
Sbjct: 318 TTNGLGEMENLGEAINTAGNECFPTFRPNGD-LYFSSDGHIGLGGLDVYVARQNMAQQWT 376

Query: 431 INTPAY 436
           I  P +
Sbjct: 377 IEHPGF 382



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 25/154 (16%)

Query: 264 RFSSNGKRALISV-QKDEAMDIY-------SVDLQSNATERLT---NTLFINISASYSPD 312
            FS + +    +    D     Y         D       +L    +TL      + SPD
Sbjct: 234 TFSPDQRTMYFTQCTTDPNYPRYAQVMTSARSDAAWAKATKLDISKDTLSSFAHPAVSPD 293

Query: 313 SSQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKE-----ASYFDPVWSPQGDLIAFT 364
              + F SD    +G + L+ ++   +    +    E      +   P + P GDL  + 
Sbjct: 294 GQWLYFVSDMPGGQGGQDLWRIRLTTNGLGEMENLGEAINTAGNECFPTFRPNGDL--YF 351

Query: 365 KFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTW 397
              G    IG+   D    R  + +   ++ P +
Sbjct: 352 SSDG---HIGLGGLDVYVARQNMAQQWTIEHPGF 382



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 24/135 (17%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP----KRIG---NFRSMILAPRFSSN 268
            P  SP+ Q + + +          L   R+        + +G   N       P F  N
Sbjct: 287 HPAVSPDGQWLYFVSDMPGGQGGQDLWRIRLTTNGLGEMENLGEAINTAGNECFPTFRPN 346

Query: 269 GKRALISVQKD---EAMDIYSVDLQSNATERLT--------NTLFINISASYSPDSSQIV 317
           G     S         +D+Y    + N  ++ T        N+   +   ++    ++  
Sbjct: 347 GD-LYFSSDGHIGLGGLDVYV--ARQNMAQQWTIEHPGFPLNSNGDDFGLTFEGPYNRGF 403

Query: 318 FESDRE---GKEQLY 329
           F S+R    G + +Y
Sbjct: 404 FSSNRGDARGWDHIY 418


>gi|8923881|ref|NP_061109.1| WD repeat and SOCS box-containing protein 2 [Homo sapiens]
 gi|20532294|sp|Q9NYS7|WSB2_HUMAN RecName: Full=WD repeat and SOCS box-containing protein 2;
           Short=WSB-2; AltName: Full=CS box-containing WD protein
 gi|7963654|gb|AAF71302.1| CS box-containing WD protein [Homo sapiens]
 gi|16198433|gb|AAH15887.1| WD repeat and SOCS box-containing 2 [Homo sapiens]
 gi|312150476|gb|ADQ31750.1| WD repeat and SOCS box-containing 2 [synthetic construct]
          Length = 404

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 83/216 (38%), Gaps = 23/216 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D+
Sbjct: 119 PDVSCLVLATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDK 176

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 177 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 233

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----------- 389
             +  ++S     +SP   L+    +      I      G + R L              
Sbjct: 234 KLEGHQSSVVSCDFSPDSALLVTASYDTN--VIMWDPYTGERLRSLHHTQVDPAMDDSDV 291

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S+L++  +SP G   ++      D   ++++++L
Sbjct: 292 HISSLRSVCFSPEG---LYLATVADDRLLRIWALEL 324



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 72/247 (29%), Gaps = 41/247 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 16  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKN 75

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKRA---------------LISVQKDEAM 282
           +T+   +PK            +  +P  S   ++                L +   D  +
Sbjct: 76  ETKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLVLATGLNDGQI 135

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 136 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 194

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 195 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 252

Query: 403 SLIFSRK 409
            L+ +  
Sbjct: 253 LLVTASY 259


>gi|119773538|ref|YP_926278.1| peptidase [Shewanella amazonensis SB2B]
 gi|119766038|gb|ABL98608.1| peptidase [Shewanella amazonensis SB2B]
          Length = 657

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 68/187 (36%), Gaps = 15/187 (8%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                S++G   L+   +    ++Y + L   +  +LTN         + P   +++   
Sbjct: 71  TGSSISADGSAVLVGSDESGIYNLYRLSLLDGSKTQLTNFEDSTFPVRWFPGDDRVLLSK 130

Query: 321 DREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAIGVM 376
           D+ G     LYV + +GS  K ++  +        +S  G    +   + + +   +   
Sbjct: 131 DKGGNELNHLYVRELDGS-VKDMTPGENTRASFAGFSGDGKAFFVQTNERNPKFMDLYRY 189

Query: 377 KKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                +  L+ +  N +  +      SGR +  ++    +    +Y +DL  R       
Sbjct: 190 DASTYERTLVFQ--NDEGYSLGDIDRSGRFVALNKSVS-NKDIDIYLLDLRSRALK---- 242

Query: 434 PAYASDP 440
           P   S+P
Sbjct: 243 PVMVSEP 249



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 83/234 (35%), Gaps = 22/234 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S +   V   + D+  I  +Y +   +D +  ++ NF       R+     R L+S  
Sbjct: 74  SISADGSAVLVGS-DESGIYNLYRLSL-LDGSKTQLTNFEDSTFPVRWFPGDDRVLLSKD 131

Query: 278 KDEA--MDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQ---LY 329
           K       +Y  +L  +  +    T   N  AS   +S D     F    E   +   LY
Sbjct: 132 KGGNELNHLYVRELDGSVKDM---TPGENTRASFAGFSGDGKAF-FVQTNERNPKFMDLY 187

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQER--LL 386
              ++  ++  + Q+ E  Y        G  +A     S +   I ++       +  ++
Sbjct: 188 RYDASTYERTLVFQNDEG-YSLGDIDRSGRFVALNKSVSNKDIDIYLLDLRSRALKPVMV 246

Query: 387 VEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            E       +  +++ +G++L +      +   ++++ D+       I +  + 
Sbjct: 247 SEPGLEAAEEVFSFAHNGQTLYYGSDAKSEFN-EVWAYDIASGKRQPIASHDWD 299



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 37/105 (35%), Gaps = 3/105 (2%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPS 400
           +     SY     S  G  +         + +  +      +  L    +   P  W P 
Sbjct: 63  TFFDTTSYTGSSISADGSAVLVGSDESGIYNLYRLSLLDGSKTQLTNFEDSTFPVRWFPG 122

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
              ++ S+ K G+  + LY  +L+G  + +  TP   +   + GF
Sbjct: 123 DDRVLLSKDKGGNELNHLYVRELDGSVKDM--TPGENTRASFAGF 165


>gi|297693137|ref|XP_002823880.1| PREDICTED: WD repeat and SOCS box-containing protein 2-like isoform
           1 [Pongo abelii]
          Length = 404

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 83/216 (38%), Gaps = 23/216 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D+
Sbjct: 119 PDVSCLVLATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDK 176

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 177 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 233

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----------- 389
             +  ++S     +SP   L+    +      I      G + R L              
Sbjct: 234 KLEGHQSSVVSCDFSPDSALLVTASYDTN--VIMWDPYTGERLRSLHHTQVDPAMDDSDV 291

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S+L++  +SP G   ++      D   ++++++L
Sbjct: 292 HISSLRSVCFSPEG---LYLATVADDRLLRIWALEL 324



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/247 (11%), Positives = 74/247 (29%), Gaps = 41/247 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT-----------YDDEDILRVYLMDTRIDRA 249
                         +   FSP+    A++             +++ I + +   +R  + 
Sbjct: 16  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSGKN 75

Query: 250 PKRIGNFR------------SMILAPRFSSNGKRA---------------LISVQKDEAM 282
             +                  +  +P  S   ++                L +   D  +
Sbjct: 76  ETKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLVLATGLNDGQI 135

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 136 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 194

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 195 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 252

Query: 403 SLIFSRK 409
            L+ +  
Sbjct: 253 LLVTASY 259


>gi|224008292|ref|XP_002293105.1| hypothetical protein THAPSDRAFT_42152 [Thalassiosira pseudonana
           CCMP1335]
 gi|220971231|gb|EED89566.1| hypothetical protein THAPSDRAFT_42152 [Thalassiosira pseudonana
           CCMP1335]
          Length = 579

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 6/118 (5%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                Q +    FSP+ +  A A++D +    + + + R       +      +    +S
Sbjct: 461 LTGHQQAVNHLAFSPDSRFFASASFDKK----IKVWNGRSGDFVATMTGHVGAVYQVAWS 516

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DRE 323
           S+G+  + S  KD    ++ V     A E L        +  +SP+ S +   S DR 
Sbjct: 517 SDGRYLV-SASKDSTAKLWEVPSGKRAKETLPGHEDEVYALDWSPNGSSVATGSKDRT 573



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 6/147 (4%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           LIS   D  + ++         +RLT         ++SPDS      S     +++ V  
Sbjct: 437 LISGSDDFTLLLWHPTESKKPLKRLTGHQQAVNHLAFSPDSRFFASASF---DKKIKVWN 493

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
               D          + +   WS  G  +             V     ++E L   +  +
Sbjct: 494 GRSGDFVATMTGHVGAVYQVAWSSDGRYLVSASKDSTAKLWEVPSGKRAKETLPGHEDEV 553

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            A  WSP+G S+    K   D   K++
Sbjct: 554 YALDWSPNGSSVATGSK---DRTIKIW 577



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 51/141 (36%), Gaps = 7/141 (4%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA- 293
           D   +    T   +  KR+   +  +    FS +  R   S   D+ + ++  + +S   
Sbjct: 443 DFTLLLWHPTESKKPLKRLTGHQQAVNHLAFSPD-SRFFASASFDKKIKVW--NGRSGDF 499

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              +T  +      ++S D   +V  S ++   +L+ +  +G   K      E   +   
Sbjct: 500 VATMTGHVGAVYQVAWSSDGRYLVSAS-KDSTAKLWEV-PSGKRAKETLPGHEDEVYALD 557

Query: 354 WSPQGDLIAFTKFSGEKFAIG 374
           WSP G  +A T        I 
Sbjct: 558 WSPNGSSVA-TGSKDRTIKIW 577



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 51/174 (29%), Gaps = 16/174 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             P     +    +SP+ + +A           V   D             +  +L+  +
Sbjct: 191 TLPGHTDAILHVSYSPDGKHLA----SGGGDATVRFWDVFTSTPRHTCKGHKDHVLSTAW 246

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP-----DSSQIVFES 320
           S +G R   S  K   + ++  + +  A   +          ++ P        ++V  S
Sbjct: 247 SPDGVRFA-SGDKRGFLIVWEPN-KGVAVGTIKAHSKWITGMAWEPMHRNSKCERLV-TS 303

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            ++G  +++         +        S     W   G+ + +T        + 
Sbjct: 304 SKDGLAKIW--NVRTKRCEATLAGHVDSIESVKW--GGEGLIYTASRDRTIKVW 353


>gi|145541937|ref|XP_001456656.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124424469|emb|CAK89259.1| unnamed protein product [Paramecium tetraurelia]
          Length = 439

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 53/159 (33%), Gaps = 8/159 (5%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +            VYL + +  +  K++      + +  F+ N    L S   D++  I+
Sbjct: 59  IIILQQLFSSGKFVYLWNLKTRKQIKKLVGHLKTVESISFTPN-DTILASGSSDKSTRIW 117

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            V        +L    +   S ++SPD + +   S       + +       QK      
Sbjct: 118 DVKA-GKQKAKLDGHSYTVYSVNFSPDGTTLASGSR---DNSIRLWDVKTGQQKAKLDGH 173

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            ++ +   +SP G  +A          I +      Q++
Sbjct: 174 SSTDYSVNFSPDGTTLASGSLDNS---IRLWDVKTGQQK 209



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 7/110 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    S  + D      +         ++   FSP+   +A  + D+     + L D +
Sbjct: 107 SGSSDKSTRIWDVKAGKQKAKLDGHSYTVYSVNFSPDGTTLASGSRDN----SIRLWDVK 162

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             +   ++    S   +  FS +G     S   D ++ ++  D+++   +
Sbjct: 163 TGQQKAKLDGHSSTDYSVNFSPDGTTLA-SGSLDNSIRLW--DVKTGQQK 209



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 51/144 (35%), Gaps = 12/144 (8%)

Query: 281 AMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              +Y  +L++    ++L   L    S S++P+ + +   S     +   +       QK
Sbjct: 69  GKFVYLWNLKTRKQIKKLVGHLKTVESISFTPNDTILASGSS---DKSTRIWDVKAGKQK 125

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTW 397
                   + +   +SP G  +A          I +      Q++  ++   S   +  +
Sbjct: 126 AKLDGHSYTVYSVNFSPDGTTLASGSRDNS---IRLWDVKTGQQKAKLDGHSSTDYSVNF 182

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSI 421
           SP G +L        D   +L+ +
Sbjct: 183 SPDGTTLA---SGSLDNSIRLWDV 203


>gi|229141092|ref|ZP_04269634.1| TolB domain protein [Bacillus cereus BDRD-ST26]
 gi|228642370|gb|EEK98659.1| TolB domain protein [Bacillus cereus BDRD-ST26]
          Length = 400

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 87/253 (34%), Gaps = 61/253 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY     +  L +Y +     +
Sbjct: 25  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSHDGEWLAYVKGKKQGSLELYRL-----K 75

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 +++ D++        NT F N+SA 
Sbjct: 76  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLHTFDVEKK------NTDFENVSAG 125

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD  +    S+       +     G+    + +D   +               
Sbjct: 126 VGDYAWYPDGKKFFVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 181

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQ 393
                      WSP    I+F       +S +   + +++ DGS+     ++L+     +
Sbjct: 182 DFLALVASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK 241

Query: 394 APTWSPSGRSLIF 406
              W+P+   L +
Sbjct: 242 ---WAPANNILAY 251



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAF +       + + K DG +E+ L +   +  P WS  G  L + + K      +LY
Sbjct: 20  KIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSHDGEWLAYVKGKK-QGSLELY 72

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 73  RLK-DGKKVTPFHS--EASNYQWSP 94



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 52/131 (39%), Gaps = 18/131 (13%)

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAI 373
           +I F    +    L++ + +G + K++++ +      P WS  G+ +A+ K        +
Sbjct: 20  KIAFIRHHD----LWI-KVDGKE-KQLTKGEY--ITGPKWSHDGEWLAYVKGKKQGSLEL 71

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             +K DG +      +++     WSP+   + F           L++ D+  +N    N 
Sbjct: 72  YRLK-DGKKVTPFHSEASNY--QWSPTENIIAFI------FTGTLHTFDVEKKNTDFENV 122

Query: 434 PAYASDPQWVG 444
            A   D  W  
Sbjct: 123 SAGVGDYAWYP 133


>gi|170697178|ref|ZP_02888273.1| coagulation factor 5/8 type domain protein [Burkholderia ambifaria
           IOP40-10]
 gi|170138014|gb|EDT06247.1| coagulation factor 5/8 type domain protein [Burkholderia ambifaria
           IOP40-10]
          Length = 470

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 14/213 (6%)

Query: 225 KVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDE 280
           K+ Y +Y    D      +     R   ++      I  P    FS +GK        + 
Sbjct: 46  KLVYHSYVKYGDGTSQLFLYDFSARTLTQLSKSSWGITDPMNGVFSPDGKWLAFMGISNG 105

Query: 281 AMDIYSVDL-QSNATERLTNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQSNG-- 335
           A +++ + L        LTN+     N    ++ D   +VF+ + + K+      S G  
Sbjct: 106 AWNVFMLQLGAGTPPVNLTNSTGATRNEDPKFATDGKTLVFKQNGDVKQGTLSYTSAGPV 165

Query: 336 -SDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            +    ++     S Y  P  +P    + +   +G    +           +    + LQ
Sbjct: 166 FTSVVSLTNAPAGSEYSMPFLAPDASAVYYATGTGSNMGLMKRTIATGATAVFDHPAGLQ 225

Query: 394 --APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              P     G  + ++R KD     ++Y+   +
Sbjct: 226 TYYPIVRRDG-MVFYARWKDTGGADQIYAKTAD 257



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 82/284 (28%), Gaps = 59/284 (20%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSP 221
           QS     G    ++++    V  G   + L + D     +  L+ S   I       FSP
Sbjct: 34  QSNASFPGALTGKLVY-HSYVKYGDGTSQLFLYDFSARTLTQLSKSSWGITDPMNGVFSP 92

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKD 279
           + + +A+    +     V+++       P  + N         P+F+++GK  +     D
Sbjct: 93  DGKWLAFMGISNG-AWNVFMLQLGAGTPPVNLTNSTGATRNEDPKFATDGKTLVFKQNGD 151

Query: 280 EAMDIYSVDLQS---NATERLTNTLF--INISASYSPDSSQIVFES-------------- 320
                 S         +   LTN            +PD+S + + +              
Sbjct: 152 VKQGTLSYTSAGPVFTSVVSLTNAPAGSEYSMPFLAPDASAVYYATGTGSNMGLMKRTIA 211

Query: 321 --------------------------------DREGKEQLYVMQSNGSDQKRISQDKE-- 346
                                           D  G +Q+Y   ++ +         +  
Sbjct: 212 TGATAVFDHPAGLQTYYPIVRRDGMVFYARWKDTGGADQIYAKTADPASTPSALPINDCM 271

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++  DP      + + F+  +   + + V      Q   L +  
Sbjct: 272 SNNSDPAPVSGTNYVFFSSTTAGGYQLYVGDVTTGQRWSLSQFG 315


>gi|256985170|ref|NP_081630.2| POC1 centriolar protein homolog A [Mus musculus]
 gi|91207987|sp|Q8JZX3|POC1A_MOUSE RecName: Full=POC1 centriolar protein homolog A; AltName: Full=WD
           repeat-containing protein 51A
          Length = 405

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 83/228 (36%), Gaps = 18/228 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG + ++L +      +  Y        +    FSP+   +A  + D    +R+++ + +
Sbjct: 36  SGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRD--KTVRIWVPNVK 93

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +    R     + + +  F S+G+  + +   D+ + ++S   Q      LT  +    
Sbjct: 94  GESTVFR--AHTATVRSVHFCSDGQSLV-TASDDKTVKVWSTHRQ-RFLFSLTQHINWVR 149

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A +SPD   IV  SD    + + +      +      +         + P G  IA   
Sbjct: 150 CAKFSPDGRLIVSASD---DKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAG 206

Query: 366 FSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
                  +     D    RLL    +  + + A ++ PSG  LI +  
Sbjct: 207 MDNTV-KVW----DARTHRLLQHYQLHSAAVNALSFHPSGNYLITASS 249



 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 69/225 (30%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +      +  +    +    F  + Q +  A+ D      V +  T 
Sbjct: 78  SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDK----TVKVWSTH 133

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             R    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 134 RQRFLFSLTQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKTSRECIHSYCEHGGFV 190

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + I           + V  +      +  Q   A+     + P G+ +   
Sbjct: 191 TYVDFHPSGTCIAAAGM---DNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITA 247

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 248 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 282


>gi|212692435|ref|ZP_03300563.1| hypothetical protein BACDOR_01931 [Bacteroides dorei DSM 17855]
 gi|212665014|gb|EEB25586.1| hypothetical protein BACDOR_01931 [Bacteroides dorei DSM 17855]
          Length = 747

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 93/296 (31%), Gaps = 64/296 (21%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-----IGNFR 257
            ++     D+    P  SP+ + +A+          +Y+ +    +  +      +GN+ 
Sbjct: 151 QKHWMEVDDEKTASPVPSPDGKWIAFI-----KNQNIYVKEVATGKEKQLSLDGTLGNYY 205

Query: 258 SMILAPRFSSNGKRAL------------ISVQKDEAMDI--------------------- 284
           S  +  R+S + K+                V+   A  +                     
Sbjct: 206 SAYI--RWSPDSKKVASCKIRPVEKRYVYYVESSPADQLQPKLHKQEYAKPGDELPFKVP 263

Query: 285 YSVDLQSNAT----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQ 338
              +++S  +      L +  +      ++PDS  + FE ++ G +   V  + +     
Sbjct: 264 CIYEVESGRSIIPSTELFDRQYEVYGPEWNPDSRAVTFEYNQRGHQVYRVLELSAETGKV 323

Query: 339 KRI---SQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNL 392
           + +   + DK  +Y          G  + +         + +  +  +Q    + +    
Sbjct: 324 RPLVEETSDKYVNYTRHFRHDLKDGKQMIWMSERDNWNHLYMYNRITAQPDYQITKGEWY 383

Query: 393 --QAPTWSPSGRSLIFSRK--KDGDTGSKL--YSIDLNGRNETLINTPAYASDPQW 442
             +        R + FS    + G+    +  Y I  +G+  T + TP       W
Sbjct: 384 VREVLRVDEDNRQIYFSANGMEAGEDPYLIRYYRIGFDGKGLTCL-TPEEGMHRAW 438



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 19/168 (11%), Positives = 58/168 (34%), Gaps = 16/168 (9%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRF 265
            R   ++ P ++P+ + V +        +   L  +      + +    + + +     F
Sbjct: 282 DRQYEVYGPEWNPDSRAVTFEYNQRGHQVYRVLELSAETGKVRPLVEETSDKYVNYTRHF 341

Query: 266 S---SNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINIS-ASYSPDSSQIVFES 320
                +GK+ +   ++D    +Y  +  +     ++T   +          D+ QI F +
Sbjct: 342 RHDLKDGKQMIWMSERDNWNHLYMYNRITAQPDYQITKGEWYVREVLRVDEDNRQIYFSA 401

Query: 321 D--REGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +    G++    + Y +  +G     ++ ++        +S     + 
Sbjct: 402 NGMEAGEDPYLIRYYRIGFDGKGLTCLTPEEGMHRAW--FSEDMKYLV 447


>gi|120405324|ref|YP_955153.1| hypothetical protein Mvan_4370 [Mycobacterium vanbaalenii PYR-1]
 gi|119958142|gb|ABM15147.1| hypothetical protein Mvan_4370 [Mycobacterium vanbaalenii PYR-1]
          Length = 393

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/271 (18%), Positives = 94/271 (34%), Gaps = 49/271 (18%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N     PS   +   P  +P                 +Y+ D       +++ +      
Sbjct: 31  NPDTTAPSTSDVTTAPMLAP-------PALFYSKAGSLYISDP-AGAPGRKLTDGP-ADS 81

Query: 262 APRFSSNGKRALISVQKDE---AMDIYSVDLQ-----SNATERLTNTLFIN--------- 304
            P  S +        + D      +++ +DL        A  RL     +          
Sbjct: 82  EPAPSPDLAHVAFIRKADASGYGGELWVLDLSPDREPEGAPYRLVEPASLPSIYADTEVG 141

Query: 305 ------ISASYSPDSSQIVF-ESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVW 354
                 +S  +SP   Q+ F ++   G   L     NG   S ++R+  D         W
Sbjct: 142 DVPRRIVSPRWSPTGDQVAFLDAGEGGGLLLVAYAVNGEIVSPEQRLFADAGY-----AW 196

Query: 355 SPQGDLIAFTKFSGEKFAIGV-MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +P G  IA+T    +   + V +   G     +V+D+N  + ++  +GR+++F+   +GD
Sbjct: 197 APDGQHIAWTGGRSDVSPVDVNVLAVGGDSTSVVKDTNAFSVSYGDAGRTVLFA---NGD 253

Query: 414 TGSKLYS---IDLNGRNETLINTPAYAS-DP 440
              +L++     L G     + TP     DP
Sbjct: 254 ASGELFADIPFALRGGGVYSVATPGGVPIDP 284



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 66/201 (32%), Gaps = 26/201 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL--RVYLMDTRIDRA 249
           SL + D  GA  R LT        EP  SP+   VA+    D       ++++D   DR 
Sbjct: 60  SLYISDPAGAPGRKLTDG--PADSEPAPSPDLAHVAFIRKADASGYGGELWVLDLSPDRE 117

Query: 250 PK-------------------RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           P+                    +G+    I++PR+S  G +       +    +      
Sbjct: 118 PEGAPYRLVEPASLPSIYADTEVGDVPRRIVSPRWSPTGDQVAFLDAGEGGGLLLVAYAV 177

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASY 349
           +         LF +   +++PD   I +   R         + + G D   + +D  A  
Sbjct: 178 NGEIVSPEQRLFADAGYAWAPDGQHIAWTGGRSDVSPVDVNVLAVGGDSTSVVKDTNA-- 235

Query: 350 FDPVWSPQGDLIAFTKFSGEK 370
           F   +   G  + F       
Sbjct: 236 FSVSYGDAGRTVLFANGDASG 256



 Score = 36.9 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 28/104 (26%)

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-GDTGSKLYSIDLN------ 424
           ++ +    G+  R L +      P  SP    + F RK D    G +L+ +DL+      
Sbjct: 60  SLYISDPAGAPGRKLTDGPADSEPAPSPDLAHVAFIRKADASGYGGELWVLDLSPDREPE 119

Query: 425 ---------------------GRNETLINTPAYASDPQWVGFMD 447
                                G     I +P ++     V F+D
Sbjct: 120 GAPYRLVEPASLPSIYADTEVGDVPRRIVSPRWSPTGDQVAFLD 163


>gi|41056233|ref|NP_956412.1| WD repeat-containing protein 51B [Danio rerio]
 gi|33115165|gb|AAH55275.1| WD repeat domain 51B [Danio rerio]
          Length = 490

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 86/238 (36%), Gaps = 15/238 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    SL + +       +       ++    F+P+   VA ++ D      V L    
Sbjct: 35  TGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQ----TVRLWTPS 90

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           I           + + +  FS +G+R + +   D+++ ++ V+ +      L        
Sbjct: 91  IKGESTVFKAHTASVRSVNFSRDGQRLV-TASDDKSVKVWGVERK-KFLYSLNRHTNWVR 148

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A +SPD   I    D      + +  ++      I  D   S     ++  G  IA + 
Sbjct: 149 CARFSPDGRLIASCGD---DRTVRLWDTSSHQCTNIFTDYGGSATFVDFNSSGTCIA-SS 204

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +     I  ++ +   +   V ++ +   ++ PSG  LI      G + S +  +DL
Sbjct: 205 GADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLI-----SGSSDSTIKILDL 257



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 72/216 (33%), Gaps = 21/216 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + Q++  A+ D      V +      +    +    + +   RFS +G+    S  
Sbjct: 109 NFSRDGQRLVTASDDK----SVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIA-SCG 163

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++  D  S+    +        SA++   +S     +       + +     + 
Sbjct: 164 DDRTVRLW--DTSSHQCTNIFTDYG--GSATFVDFNSSGTCIASSGADNTIKIWDIRTNK 219

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-- 395
             +  +   A      + P G+ +  +  S     I     D  + RL+      + P  
Sbjct: 220 LIQHYKVHNAGVNCFSFHPSGNYLI-SGSSDSTIKI----LDLLEGRLIYTLHGHKGPVL 274

Query: 396 --TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             T+S  G   +F+     D+   ++  + +  N  
Sbjct: 275 TVTFSRDGD--LFASG-GADSQVLMWKTNFDSLNYR 307



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 66/170 (38%), Gaps = 9/170 (5%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             + +I    F+ N K+   +   D+++ I+++  ++ A   + +T  I    +++P  S
Sbjct: 16  GHKDVISCADFNPNNKQLA-TGSCDKSLMIWNLAPKARAFRFVGHTDVI-TGVNFAPSGS 73

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S R+   +L+     G     + +   AS     +S  G  +  T    +   + 
Sbjct: 74  LVA-SSSRDQTVRLWTPSIKGEST--VFKAHTASVRSVNFSRDGQRLV-TASDDKSVKVW 129

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +++      L    + ++   +SP GR +        D   +L+    +
Sbjct: 130 GVERKKFLYSLNRHTNWVRCARFSPDGRLIA---SCGDDRTVRLWDTSSH 176



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 61/184 (33%), Gaps = 14/184 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y        +   RFSP+ + +A       D   V L DT   +      ++        
Sbjct: 138 YSLNRHTNWVRCARFSPDGRLIASC----GDDRTVRLWDTSSHQCTNIFTDYGGSATFVD 193

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDR 322
           F+S+G     S   D  + I+  D+++N   +    +   +N   S+ P  + ++  S  
Sbjct: 194 FNSSGTCIA-SSGADNTIKIW--DIRTNKLIQHYKVHNAGVNCF-SFHPSGNYLISGSS- 248

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                + ++              +       +S  GDL A +  +  +  +     D   
Sbjct: 249 --DSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFA-SGGADSQVLMWKTNFDSLN 305

Query: 383 ERLL 386
            R L
Sbjct: 306 YREL 309


>gi|260062304|ref|YP_003195384.1| hypothetical protein RB2501_11942 [Robiginitalea biformata
           HTCC2501]
 gi|88783866|gb|EAR15037.1| hypothetical protein RB2501_11942 [Robiginitalea biformata
           HTCC2501]
          Length = 284

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 73/227 (32%), Gaps = 42/227 (18%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN---ATERL-TNTLFINI 305
           P  +           F+++G+     V   E  +I+ V  +       ++L  ++ F + 
Sbjct: 26  PGLVSRKDRHEFGSVFTADGREFYFGVDTGEQSEIHMVRWEGGVWGEPQKLFADSPFSHN 85

Query: 306 SASYSPDSSQIVFESDREGK-------EQLYVMQSNGSDQKRISQDKE-----ASYFDPV 353
               SPD S++ + SDR G          ++     G                A+ +   
Sbjct: 86  DPMLSPDGSRLYYISDRPGTETRHKKDYDIWFSLREGGGWSPPINAGYPVNSPANEYYAS 145

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMK------KDGSQERLLVEDSNLQAPTW------SPSG 401
           ++  G L   +       A+          KDGS    +   + +  P +      SP  
Sbjct: 146 FAADGSLFFASNHGAGTEALYNYDIYRSPWKDGSFRTPVQLPAAINTPHYEADVFVSPDE 205

Query: 402 RSLIF-SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
             +IF + +++G     LY     G             D  W+  ++
Sbjct: 206 SYMIFCAVRREGSGQGDLYISFRGG-------------DGLWLPAVN 239



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/243 (14%), Positives = 74/243 (30%), Gaps = 38/243 (15%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAP 263
           L   +D+  F   F+ + ++  +     ++  + +   +  +   P+++  +       P
Sbjct: 28  LVSRKDRHEFGSVFTADGREFYFGVDTGEQSEIHMVRWEGGVWGEPQKLFADSPFSHNDP 87

Query: 264 RFSSNGKRALISVQKDEAMDIYSVD-------LQSNATERLT------NTLFINISASYS 310
             S +G R      +      +  D        +              N+      AS++
Sbjct: 88  MLSPDGSRLYYISDRPGTETRHKKDYDIWFSLREGGGWSPPINAGYPVNSPANEYYASFA 147

Query: 311 PDSSQIVFESDRE-GKEQLYVMQS------NGSDQKRISQ----DKEASYFDPVWSPQGD 359
            D S   F S+   G E LY          +GS +  +      +      D   SP   
Sbjct: 148 ADGSLF-FASNHGAGTEALYNYDIYRSPWKDGSFRTPVQLPAAINTPHYEADVFVSPDES 206

Query: 360 LIAF--TKFSG-EKFAIGVMKKDGSQERL--------LVEDSNLQAPTWSPSGRSLIFSR 408
            + F   +  G  +  + +  + G    L        +    +   P  +  G    F+R
Sbjct: 207 YMIFCAVRREGSGQGDLYISFRGGDGLWLPAVNLGETINTPGHELCPFVTADGNYFFFTR 266

Query: 409 KKD 411
             D
Sbjct: 267 DGD 269



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 62/216 (28%), Gaps = 34/216 (15%)

Query: 184 VVSGIIKNSLCVMDRDGA---NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            V    ++ + ++  +G      + L         +P  SP+  ++ Y +       R  
Sbjct: 51  GVDTGEQSEIHMVRWEGGVWGEPQKLFADSPFSHNDPMLSPDGSRLYYISDRPGTETRHK 110

Query: 241 LMDTRIDRAPKRIGNFRSMILA-----------PRFSSNGKRALISVQKDEAMDIYSVDL 289
                     +  G    +                F+++G     S        +Y+ D+
Sbjct: 111 KDYDIWFSLREGGGWSPPINAGYPVNSPANEYYASFAADGSLFFASNHGAGTEALYNYDI 170

Query: 290 --------QSNATERLT---NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQSNG 335
                         +L    NT         SPD S ++F + R    G+  LY+    G
Sbjct: 171 YRSPWKDGSFRTPVQLPAAINTPHYEADVFVSPDESYMIFCAVRREGSGQGDLYISFRGG 230

Query: 336 SDQ------KRISQDKEASYFDPVWSPQGDLIAFTK 365
                       + +       P  +  G+   FT+
Sbjct: 231 DGLWLPAVNLGETINTPGHELCPFVTADGNYFFFTR 266



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 41/115 (35%), Gaps = 11/115 (9%)

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDS--NL 392
              +   K+   F  V++  G    F   +GE+  I +++ +G    + + L  DS  + 
Sbjct: 25  APGLVSRKDRHEFGSVFTADGREFYFGVDTGEQSEIHMVRWEGGVWGEPQKLFADSPFSH 84

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSK------LYSIDLNGRNETLINTPAYASDPQ 441
             P  SP G  L +   + G            +S+   G     IN     + P 
Sbjct: 85  NDPMLSPDGSRLYYISDRPGTETRHKKDYDIWFSLREGGGWSPPINAGYPVNSPA 139


>gi|85710781|ref|ZP_01041842.1| Acylaminoacyl-peptidase [Idiomarina baltica OS145]
 gi|85695185|gb|EAQ33122.1| Acylaminoacyl-peptidase [Idiomarina baltica OS145]
          Length = 672

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 90/299 (30%), Gaps = 44/299 (14%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI---IKNSLCV 195
           ++G            +    +  +        G F +   +      +      K  L +
Sbjct: 11  LLGLAVTGQARDMTLMETVTAQSVVDVNLSPNGQFTAITKYYPARPYTDKEDSGKTELVI 70

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
              +G    YL+        E  F PN + + +    D D               + +  
Sbjct: 71  RTANGKETVYLSKEESFSDVE--FGPNSEYIYFTAKRDGDDYSELYRIPLAGGGVQSVYE 128

Query: 256 FRSMILAPRFSSNGKRALI--SVQKDEAMD--------------------IYSVDL--QS 291
           F   I A   SS+G+  +   +  +D+                       +Y VDL    
Sbjct: 129 FDGSITAYDLSSDGQSLIFLSTGSRDKDAKKEAEYGFKAEVYEEDLTYRHLYQVDLSQAD 188

Query: 292 NATERLTNTLFINISASYSPDSSQIVFES-------DREGKEQLYVMQSNGSDQKRISQD 344
              +++T      ISA +SP+  Q++  +       D     Q ++M  NG     I   
Sbjct: 189 AEAKQVTADDVQVISAQWSPNDEQLLVRTAPTPLIDDYYMSSQYHIMSLNGETVASI--P 246

Query: 345 KEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQERLLVED--SNLQAPTW 397
            E       +SP G  +A              + V     +  R ++ D   ++Q  TW
Sbjct: 247 TEGKLGKAEFSPNGQYVALISAADYNDPSASVLKVYNTQNATIRRVLPDYQGSIQDFTW 305



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 78/267 (29%), Gaps = 45/267 (16%)

Query: 220 SPNQQKVAYATY-------DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           SPN Q  A   Y       D ED  +  L+    +       +         F  N +  
Sbjct: 40  SPNGQFTAITKYYPARPYTDKEDSGKTELVIRTANGKETVYLSKEESFSDVEFGPNSEYI 99

Query: 273 LISVQKDEAM--DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK----- 325
             + ++D     ++Y + L     + +        +   S D   ++F S          
Sbjct: 100 YFTAKRDGDDYSELYRIPLAGGGVQSVYEFDGSITAYDLSSDGQSLIFLSTGSRDKDAKK 159

Query: 326 -----------------EQLYVMQSN--GSDQKRISQDKEASYFDPVWSP-QGDLIAFTK 365
                              LY +  +   ++ K+++ D +       WSP    L+  T 
Sbjct: 160 EAEYGFKAEVYEEDLTYRHLYQVDLSQADAEAKQVTAD-DVQVISAQWSPNDEQLLVRTA 218

Query: 366 FSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF--SRKKDGDTGSK 417
            +             +M  +G     +  +  L    +SP+G+ +    +   +  + S 
Sbjct: 219 PTPLIDDYYMSSQYHIMSLNGETVASIPTEGKLGKAEFSPNGQYVALISAADYNDPSASV 278

Query: 418 LYSIDLNGRNETLI--NTPAYASDPQW 442
           L   +        +  +      D  W
Sbjct: 279 LKVYNTQNATIRRVLPDYQGSIQDFTW 305


>gi|119618524|gb|EAW98118.1| WD repeat and SOCS box-containing 2, isoform CRA_b [Homo sapiens]
          Length = 400

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 83/216 (38%), Gaps = 23/216 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D+
Sbjct: 115 PDVSCLVLATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDK 172

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 173 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 229

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----------- 389
             +  ++S     +SP   L+    +      I      G + R L              
Sbjct: 230 KLEGHQSSVVSCDFSPDSALLVTASYDTN--VIMWDPYTGERLRSLHHTQVDPAMDDSDV 287

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S+L++  +SP G   ++      D   ++++++L
Sbjct: 288 HISSLRSVCFSPEG---LYLATVADDRLLRIWALEL 320



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 72/247 (29%), Gaps = 41/247 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 12  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKN 71

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKRA---------------LISVQKDEAM 282
           +T+   +PK            +  +P  S   ++                L +   D  +
Sbjct: 72  ETKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLVLATGLNDGQI 131

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 132 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 190

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 191 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 248

Query: 403 SLIFSRK 409
            L+ +  
Sbjct: 249 LLVTASY 255


>gi|60680593|ref|YP_210737.1| hypothetical protein BF1054 [Bacteroides fragilis NCTC 9343]
 gi|60492027|emb|CAH06789.1| conserved hypothetical exported protein [Bacteroides fragilis NCTC
           9343]
          Length = 952

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 71/220 (32%), Gaps = 7/220 (3%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I   ++   G      L       +    + +   D D  NI+ LTP   Q    P    
Sbjct: 344 INSRLSYRNGRVYWSELVPGLR-WTHQNYSIIKYYDLDKKNIKTLTPR--QRYLSPAIDE 400

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
             Q +A +    E   ++ L+               +  +     + G   ++    D  
Sbjct: 401 QGQHIAVSRPTVEGKNQLVLIQAEKGNELAAFDVPDNAFIKELTFAGGDTIILIAVADSG 460

Query: 282 MDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + +   +  +   + L  T  +N  S  +  D     FES   G   +Y +       +R
Sbjct: 461 IRLLQFNFGNGIWKELLKTTSVNITSPIW-KDGKIF-FESGANGTNNIYSLNPADGQVRR 518

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           ++  +  ++     S  G L  F+ +  + + I  +  D 
Sbjct: 519 MTAARFGAFDPSFGSSDGRLF-FSDYQADGYRIASLPTDS 557



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 42/130 (32%), Gaps = 7/130 (5%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              I+  +  +   +L          K + +    +   P+W   G  I F   +     
Sbjct: 448 GDTIILIAVADSGIRLLQFNFGNGIWKELLKTTSVNITSPIW-KDGK-IFFESGANGTNN 505

Query: 373 IGVMKK-DGSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           I  +   DG   R+         P++ S  GR  +F      D G ++ S+  +      
Sbjct: 506 IYSLNPADGQVRRMTAARFGAFDPSFGSSDGR--LFFSDYQAD-GYRIASLPTDSMLFEK 562

Query: 431 INTPAYASDP 440
            +    AS P
Sbjct: 563 TDLNQSASMP 572


>gi|295097398|emb|CBK86488.1| Periplasmic component of the Tol biopolymer transport system
           [Enterobacter cloacae subsp. cloacae NCTC 9394]
          Length = 391

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 73/214 (34%), Gaps = 30/214 (14%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           P  +   R+      F ++G   L + + D   + Y +DL++    +LT     N    +
Sbjct: 28  PPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHWNYYLLDLKNAEAVQLTEGAGDNTFGGF 87

Query: 310 -SPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRIS-----QDKEASYFDPV--------- 353
            SPD   + +  +DR     L  +      ++ +           ++             
Sbjct: 88  LSPDDKSLYYVKNDRT----LLEVDLQTLAEREVYRVPEEWVGYGTWVANSDCTKLVGIE 143

Query: 354 -----WSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSP-SGRSL 404
                W+P  D   F  F   G    +  +     +   + ++   L  P + P    ++
Sbjct: 144 IARRDWTPLNDWKIFHDFFHKGPHCRLLRVDLKTGESTTIHDEKIWLGHPIYRPFDDNTV 203

Query: 405 IFSRKKDGDT-GSKLYSIDLNGRNETLINTPAYA 437
            F  +   D   ++++ ++ +G N   + T A  
Sbjct: 204 AFCHEGPHDLVDARMWLVNEDGSNVRKVKTHAEG 237



 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 83/254 (32%), Gaps = 35/254 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F  +   + +A   D      YL+D +   A +              S + K 
Sbjct: 36  NYFYQKCFFNDGSHLLFAGEFDGH-WNYYLLDLKNAEAVQLTEGAGDNTFGGFLSPDDKS 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL-------------------TNTLFINISAS-YSP 311
                       +  VDLQ+ A   +                   T  + I I+   ++P
Sbjct: 95  LYYVKN---DRTLLEVDLQTLAEREVYRVPEEWVGYGTWVANSDCTKLVGIEIARRDWTP 151

Query: 312 DSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSG 368
            +   +F          +L  +     +   I  +K      P++ P   + +AF     
Sbjct: 152 LNDWKIFHDFFHKGPHCRLLRVDLKTGESTTIHDEKIW-LGHPIYRPFDDNTVAFCHEGP 210

Query: 369 EKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  + ++ +DGS  R +    E  +     W P G +LI+     G  G  +   +
Sbjct: 211 HDLVDARMWLVNEDGSNVRKVKTHAEGESCTHEFWVPDGSALIYVSYLKGQQGRTISRFN 270

Query: 423 LN-GRNETLINTPA 435
            + G NE ++N PA
Sbjct: 271 PDTGVNEAVMNMPA 284



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/237 (10%), Positives = 69/237 (29%), Gaps = 43/237 (18%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           ++P      +  +  +      L           I + +  +  P +   +        +
Sbjct: 149 WTPLNDWKIFHDFFHKGPHCRLLRVDLKTGESTTIHDEKIWLGHPIYRPFDDNTVAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ V+   +   ++ T+    +     + PD S +++ S  +G++   +  
Sbjct: 209 GPHDLVDARMWLVNEDGSNVRKVKTHAEGESCTHEFWVPDGSALIYVSYLKGQQGRTISR 268

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAI---------- 373
              +    + +      S+        G L+                + I          
Sbjct: 269 FNPDTGVNEAVMNMPACSHLMSNV--DGTLLVGDGSGTPVDVKDTGGYTIDNDPYLYAFD 326

Query: 374 -------GVMKKDGS-----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                   + + D S       R +        P+++P  +++++S  KDG     +
Sbjct: 327 VAKKACYRIARHDTSWATVANSRQVTHP----HPSFTPDEKAVLYSSDKDGKPALYI 379



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 58/185 (31%), Gaps = 25/185 (13%)

Query: 288 DLQSN-ATERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           D  +     RLT               +  D S ++F  + +G    Y++    ++  ++
Sbjct: 16  DPDTGVEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHWNYYLLDLKNAEAVQL 75

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAPT- 396
           ++    + F    SP    + + K       + +      +   + E+        A + 
Sbjct: 76  TEGAGDNTFGGFLSPDDKSLYYVKNDRTLLEVDLQTLAEREVYRVPEEWVGYGTWVANSD 135

Query: 397 -------------WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQW 442
                        W+P     IF          +L  +DL  G + T+ +   +   P +
Sbjct: 136 CTKLVGIEIARRDWTPLNDWKIFHDFFHKGPHCRLLRVDLKTGESTTIHDEKIWLGHPIY 195

Query: 443 VGFMD 447
             F D
Sbjct: 196 RPFDD 200



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/209 (11%), Positives = 69/209 (33%), Gaps = 25/209 (11%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG+N+R + T +  +      + P+   + Y +
Sbjct: 197 PFDDNTVAFCHEGPHDLVDARMWLVNEDGSNVRKVKTHAEGESCTHEFWVPDGSALIYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           Y      R +   +         +       L      +G   +     D +     VD+
Sbjct: 257 YLKGQQGRTISRFNPDTGVNEAVMNMPACSHLMSNV--DGTLLV----GDGSGTP--VDV 308

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +       T    I+             F+     K+  Y +  + +    ++  ++ ++
Sbjct: 309 KD------TGGYTIDNDPYL------YAFDV---AKKACYRIARHDTSWATVANSRQVTH 353

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             P ++P    + ++     K A+ + K 
Sbjct: 354 PHPSFTPDEKAVLYSSDKDGKPALYIAKL 382


>gi|229074221|ref|ZP_04207266.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock4-18]
 gi|228708854|gb|EEL60982.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock4-18]
          Length = 652

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/279 (12%), Positives = 82/279 (29%), Gaps = 52/279 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     +         P +S + K   
Sbjct: 24  NISDDGKNVAFVKKKVNWKDNTYRNHVWIYEKEKGKSYPLTIGDIDSTYPLWSPDSKGIA 83

Query: 274 I-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES------------ 320
             S   D    I+   +   +  ++T+      +  + P      + +            
Sbjct: 84  YLSPVGDGKNQIFFKSIDGYSEVQITDEKEGVSNFKWEPTGKGFYYIAQSKECEEIKKRK 143

Query: 321 DREGKEQ---------------LYVMQSNGSDQK------RISQDKEASYFDPVWSPQGD 359
           +R G                  +  ++ N   ++      +++  K+    +   S  G 
Sbjct: 144 ERYGDFHHVGKEHQNNCLYYIEIEKVKQNDKQERKVSGVYQLTDGKDFYIHNFDISNDGK 203

Query: 360 LIA-FTKFSGEKF---AIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFS------- 407
            +      S   +    + ++  +  + + +  D+ L A   +SP G  + +S       
Sbjct: 204 KVVCMATPSLNDYMNGDLYILDVEAGELQKMSIDTLLGASICFSPEGDKICYSASIREKD 263

Query: 408 --RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             R    D   ++Y ++     + L N  +  +  QW  
Sbjct: 264 YYRNHIQDNTLEIYDMNTGEVIQPLTNFDSTVTPLQWTA 302



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++ +        ++   +     P+WSP   
Sbjct: 22  STNISDDGKNVAFVKKKVNWKDNTYRNHVWIYEKEKGKSYPLT-IGDIDSTYPLWSPDSK 80

Query: 360 LIAFTKFSG-EKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G  K  I     DG S+ ++  E   +    W P+G+   +  + 
Sbjct: 81  GIAYLSPVGDGKNQIFFKSIDGYSEVQITDEKEGVSNFKWEPTGKGFYYIAQS 133


>gi|218248599|ref|YP_002373970.1| WD-40 repeat-containing protein [Cyanothece sp. PCC 8801]
 gi|218169077|gb|ACK67814.1| WD-40 repeat protein [Cyanothece sp. PCC 8801]
          Length = 371

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 69/215 (32%), Gaps = 25/215 (11%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG+ +  L       + +   SP+ + +   +  D     + + D       + +G    
Sbjct: 159 DGSKV-NLLKGHSGKISDLALSPDDKILVSVSASDR---TIRIWDFATGNLIETLGVDIG 214

Query: 259 MILAPRFSSNGKRALISVQKDEAM----DIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                 F+ +G   +     D+      D+ +++L  ++ ++             +PD  
Sbjct: 215 PTNNIAFTPDGMTFVTGAIGDDRTLKFWDLPTLELIRSSPQQ----PGYINDLKITPDGK 270

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++V       +  + V       +    +           SP   ++A     G      
Sbjct: 271 KLVAAV----RNYIKVWDLTTGKELLNIKGPRLDINAIAISPDSRVVATANKEGN----- 321

Query: 375 VMKKDGSQERLLV----EDSNLQAPTWSPSGRSLI 405
           +M  D ++ R L         + +  +SP GR L 
Sbjct: 322 IMLFDLTKGRKLTTLEGHKGWVLSLVFSPDGRYLY 356



 Score = 40.0 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 44/127 (34%), Gaps = 5/127 (3%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           ++ +S   + G  N   +      +   ++N + V D                +     S
Sbjct: 248 ELIRSSPQQPGYINDLKITPDGKKLVAAVRNYIKVWDLTTGKELLNIKGPRLDINAIAIS 307

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + VA           + L D    R    +   +  +L+  FS +G+    S  +D+
Sbjct: 308 PDSRVVA----TANKEGNIMLFDLTKGRKLTTLEGHKGWVLSLVFSPDGRYL-YSGAEDK 362

Query: 281 AMDIYSV 287
            + I+ +
Sbjct: 363 IIKIWQL 369



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 60/190 (31%), Gaps = 29/190 (15%)

Query: 238 RVYLMDTRIDRAP----KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--- 290
            +YL +      P    K I  F+ +I A   + +GK  L+         + +VDL+   
Sbjct: 39  EIYLEEIAQGSQPPIMVKDIQGFKGVIKALTMTPDGKILLV---GSGDATLNAVDLELEQ 95

Query: 291 --SNATERLTNTLFINI--SASYSPDSSQIVFESDREGKE---------------QLYVM 331
              + T ++ +   I +    ++  +++     SD    +                + V+
Sbjct: 96  VVYSKTHKINDYSSIVVTSQPTFLDETTSNETTSDETTSDETPLTGPMLALADDENIRVL 155

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                 +  + +       D   SP   ++     S     I         E L V+   
Sbjct: 156 SLVDGSKVNLLKGHSGKISDLALSPDDKILVSVSASDRTIRIWDFATGNLIETLGVDIGP 215

Query: 392 LQAPTWSPSG 401
                ++P G
Sbjct: 216 TNNIAFTPDG 225


>gi|187927021|ref|YP_001893366.1| coagulation factor 5/8 type domain protein [Ralstonia pickettii
           12J]
 gi|241665350|ref|YP_002983709.1| coagulation factor 5/8 type domain protein [Ralstonia pickettii
           12D]
 gi|187728775|gb|ACD29939.1| coagulation factor 5/8 type domain protein [Ralstonia pickettii
           12J]
 gi|240867377|gb|ACS65037.1| coagulation factor 5/8 type domain protein [Ralstonia pickettii
           12D]
          Length = 472

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 85/268 (31%), Gaps = 25/268 (9%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYD 232
           +  L     V  G   + + + D     +  ++ +   I       FSP+ + +A+    
Sbjct: 44  TGKLAYHSYVSYGDGTSQIFIYDFAARTLTQVSNTTWGIQDPMNAVFSPDGKWLAFMGI- 102

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             +   V+         P  + N         P+FS++GK  L     D      S    
Sbjct: 103 KNNAWNVFFWQVGTSNLPINLTNSTGQTRNEDPKFSADGKSLLFKQNGDVMQAALSYTSS 162

Query: 291 S---NATERLTNT-LFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                +   LT T   +  S    +PD + + + +       LY      +         
Sbjct: 163 GPVFTSVVNLTRTAPGVENSMPFATPDGTAVYYATGTGSGMGLYKQTIGSTTNVAFDAPA 222

Query: 346 EASYFDPVWSPQG-----DLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWS 398
             + + P+    G       +  T  + + +    +       +L + D  SN   P  S
Sbjct: 223 GLATYYPIVRADGTVFYARWLDATSQADQIYT--KVNPSDVPNQLPLNDCNSNNSDP--S 278

Query: 399 P-SGR-SLIFSRKKDGDTGSKLYSIDLN 424
           P +G   + FS    G  G +LY  D  
Sbjct: 279 PVNGTNYVFFSSTTAG--GYQLYLGDAT 304



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 54/175 (30%), Gaps = 15/175 (8%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNT-LFINI--SASYSPDSSQIVFESDREGKEQLYV 330
                D    I+  D  +    +++NT   I    +A +SPD   + F   +     ++ 
Sbjct: 52  YVSYGDGTSQIFIYDFAARTLTQVSNTTWGIQDPMNAVFSPDGKWLAFMGIKNNAWNVFF 111

Query: 331 MQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS------- 381
            Q   S+      +   +    DP +S  G  + F K +G+     +             
Sbjct: 112 WQVGTSNLPINLTNSTGQTRNEDPKFSADGKSLLF-KQNGDVMQAALSYTSSGPVFTSVV 170

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                        P  +P G ++ ++       G  LY   +        + PA 
Sbjct: 171 NLTRTAPGVENSMPFATPDGTAVYYATGTGSGMG--LYKQTIGSTTNVAFDAPAG 223



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/88 (12%), Positives = 26/88 (29%), Gaps = 6/88 (6%)

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +  +      I +          +   +    +     +SP G+ L F   K+       
Sbjct: 52  YVSYGDGTSQIFIYDFAARTLTQVSNTTWGIQDPMNAVFSPDGKWLAFMGIKNNAWNVFF 111

Query: 419 YSIDLNGRNETLINTPAYAS--DPQWVG 444
           + +  +     L N+       DP++  
Sbjct: 112 WQVGTSNLPINLTNSTGQTRNEDPKFSA 139


>gi|159155126|gb|AAI54788.1| WD repeat domain 8 [Danio rerio]
          Length = 446

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 85/226 (37%), Gaps = 16/226 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D     I +L    DQ++    +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDIGTLQIVHLYTCLDQVMHM-EWSSDSLFIL-CAMYKRGLVQVWSLEQPDWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I      +++ R+S +G+  L + + +  + ++S  L + +   +           +
Sbjct: 86  --KIDEGSIGLVSSRWSPDGRHILNTTEFNLRITVWS--LCTKSVSYIKYPKACQKGMDF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + V   +     R  + +        WSP G ++A    +  
Sbjct: 142 TADGRYMALAERRDCKDYISVFVCDDWHLLRHFESETQDLAGLEWSPNGCVLA-VWDNCL 200

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRK 409
           ++ I +   DG   RLL   S  +      +  WSPS + L     
Sbjct: 201 EYKILLYSLDG---RLLSFYSAYEWSLGIKSVAWSPSSQFLAIGSY 243



 Score = 37.7 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 9/159 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +GK     VQ      +   D+ +     L   L   +   +S DS  I+    + G
Sbjct: 16  VSPDGKYLATCVQ----YRLVVRDIGTLQIVHLYTCLDQVMHMEWSSDSLFILCAMYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++      K    +         WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQPDWHCK--IDEGSIGLVSSRWSPDGRHIL--NTTEFNLRITVWSLCTKSVS 127

Query: 385 LLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +      Q    ++  GR +  + ++D      ++  D
Sbjct: 128 YIKYPKACQKGMDFTADGRYMALAERRDCKDYISVFVCD 166


>gi|220678216|emb|CAX14755.1| WD repeat domain 8 [Danio rerio]
          Length = 446

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 85/226 (37%), Gaps = 16/226 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D     I +L    DQ++    +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDIGTLQIVHLYTCLDQVMHM-EWSSDSLFIL-CAMYKRGLVQVWSLEQPDWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I      +++ R+S +G+  L + + +  + ++S  L + +   +           +
Sbjct: 86  --KIDEGSIGLVSSRWSPDGRHILNTTEFNLRITVWS--LCTKSVSYIKYPKACQKGMDF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + V   +     R  + +        WSP G ++A    +  
Sbjct: 142 TADGRYMALAERRDCKDYISVFVCDDWHLLRHFESETQDLAGLEWSPNGCVLA-VWDNCL 200

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRK 409
           ++ I +   DG   RLL   S  +      +  WSPS + L     
Sbjct: 201 EYKILLYSLDG---RLLSFYSAYEWSLGIKSVAWSPSSQFLAIGSY 243



 Score = 37.7 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 9/159 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +GK     VQ      +   D+ +     L   L   +   +S DS  I+    + G
Sbjct: 16  VSPDGKYLATCVQ----YRLVVRDIGTLQIVHLYTCLDQVMHMEWSSDSLFILCAMYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++      K    +         WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQPDWHCK--IDEGSIGLVSSRWSPDGRHIL--NTTEFNLRITVWSLCTKSVS 127

Query: 385 LLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +      Q    ++  GR +  + ++D      ++  D
Sbjct: 128 YIKYPKACQKGMDFTADGRYMALAERRDCKDYISVFVCD 166


>gi|156742974|ref|YP_001433103.1| peptidase S9 prolyl oligopeptidase [Roseiflexus castenholzii DSM
           13941]
 gi|156234302|gb|ABU59085.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Roseiflexus castenholzii DSM 13941]
          Length = 644

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 9/118 (7%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-- 234
           I    +   SG   N++  +  DGA  + +  S       PR SP+ Q +A+ +++    
Sbjct: 134 IGVREDHSGSGEAVNTIVAISLDGAAEQRVLISGADFYANPRLSPDGQWLAWLSWNHPNM 193

Query: 235 --DILRVYLMDTRIDRAP----KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             D   +++   R D  P    +  G        P +  +G       ++    ++Y 
Sbjct: 194 PWDAAELWVAPVREDGMPGAAERIAGGPDDAAFQPAWGPDGA-LFFVAERTGWWNLYR 250



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 15/129 (11%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGV--MKK 378
             +  +  +G+ ++R+       Y +P  SP G  +A+  ++          + V  +++
Sbjct: 148 NTIVAISLDGAAEQRVLISGADFYANPRLSPDGQWLAWLSWNHPNMPWDAAELWVAPVRE 207

Query: 379 DG--SQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           DG       +    +  A  P W P G +L F  ++ G      +    NG    L    
Sbjct: 208 DGMPGAAERIAGGPDDAAFQPAWGPDG-ALFFVAERTGWWNLYRWH---NGVVHALCPME 263

Query: 435 AYASDPQWV 443
           A    P WV
Sbjct: 264 AEFGLPLWV 272



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 11/113 (9%)

Query: 275 SVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKE-----QL 328
           S   +    I ++ L   A +R L +      +   SPD   + + S           +L
Sbjct: 141 SGSGEAVNTIVAISLDGAAEQRVLISGADFYANPRLSPDGQWLAWLSWNHPNMPWDAAEL 200

Query: 329 YV--MQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +V  ++ +G     +RI+   + + F P W P G  + F       + +    
Sbjct: 201 WVAPVREDGMPGAAERIAGGPDDAAFQPAWGPDG-ALFFVAERTGWWNLYRWH 252


>gi|115376515|ref|ZP_01463748.1| hypothetical protein STIAU_0931 [Stigmatella aurantiaca DW4/3-1]
 gi|115366448|gb|EAU65450.1| hypothetical protein STIAU_0931 [Stigmatella aurantiaca DW4/3-1]
          Length = 519

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 81/252 (32%), Gaps = 37/252 (14%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             +     FEP  S    +V Y  +    +  V   D         I + R   +    S
Sbjct: 1   MNAGPGNQFEPHVS--GSRVVYT-HKAGGVGEVRWHDLSTGLHGT-IPDSRGYDVIADVS 56

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------- 317
             G   + + +      I++ DL+            + ++          V         
Sbjct: 57  --GDSVVFT-RMLSTSAIFTYDLKKG-------GPAVEVAPQPGAHRRGAVIGHHTLVWQ 106

Query: 318 ---FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KF 371
              F S  +   ++           R++QD +     P  S  G +I +TK + E     
Sbjct: 107 DYSFGSRSQ--PEITTFDLESGVLTRLTQD-DLLDRSPAVSADGRVIVWTKCAREFDCDI 163

Query: 372 AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNE 428
            + V  KDG + R L     +   P    +G+ ++++  +   G     +Y   + G  E
Sbjct: 164 WMAVAGKDGFETRALTGAQGDESQPQ--TNGQVVVYTSTRLEQGKPTQDIYWQAVEGGPE 221

Query: 429 TLINTPAYASDP 440
             +  P   ++P
Sbjct: 222 YRLALPGLDANP 233



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 10/163 (6%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            S       +I + DL+S    RLT    ++ S + S D   IV+       +    M  
Sbjct: 108 YSFGSRSQPEITTFDLESGVLTRLTQDDLLDRSPAVSADGRVIVWTKCAREFDCDIWMAV 167

Query: 334 NGSD--QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMKKDGSQERLLV 387
            G D  + R     +     P     G ++ +T    E+      I     +G  E  L 
Sbjct: 168 AGKDGFETRALTGAQGDESQPQT--NGQVVVYTSTRLEQGKPTQDIYWQAVEGGPEYRLA 225

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                  P  S  G  L+F R+           +  + + +TL
Sbjct: 226 LPGLDANPLLS--GSLLVFERQDPSGRTLNTEVVLFDMKTQTL 266



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 52/177 (29%), Gaps = 18/177 (10%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---VQKDEAMDIY 285
            ++       +   D        R+     +  +P  S++G+  + +    + D  + + 
Sbjct: 108 YSFGSRSQPEITTFDLESGVLT-RLTQDDLLDRSPAVSADGRVIVWTKCAREFDCDIWMA 166

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKE--QLYVMQSNGSDQKRI 341
                   T  LT             +   +V+ S R  +GK    +Y     G  + R+
Sbjct: 167 VAGKDGFETRALTGAQGDESQPQ--TNGQVVVYTSTRLEQGKPTQDIYWQAVEGGPEYRL 224

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG----VMKKDGSQERLLVEDSNLQA 394
           +        +P+ S  G L+ F +       +     +          L      + 
Sbjct: 225 AL--PGLDANPLLS--GSLLVFERQDPSGRTLNTEVVLFDMKTQTLYALTRTLRNEH 277



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 49/148 (33%), Gaps = 14/148 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAP 263
                 D +   P  S + + + +     E    +++     D    R +   +     P
Sbjct: 129 TRLTQDDLLDRSPAVSADGRVIVWTKCAREFDCDIWMAVAGKDGFETRALTGAQGDESQP 188

Query: 264 RFSSNGKRALISVQK----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +  +NG+  + +  +        DIY   ++     RL     ++ +   S   S +VFE
Sbjct: 189 Q--TNGQVVVYTSTRLEQGKPTQDIYWQAVEGGPEYRL-ALPGLDANPLLS--GSLLVFE 243

Query: 320 ----SDREGKEQLYVMQSNGSDQKRISQ 343
               S R    ++ +          +++
Sbjct: 244 RQDPSGRTLNTEVVLFDMKTQTLYALTR 271


>gi|322703701|gb|EFY95306.1| ribosome assembly protein 4 (RSA4) [Metarhizium anisopliae ARSEF
           23]
          Length = 772

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/259 (18%), Positives = 89/259 (34%), Gaps = 26/259 (10%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN--IRYLTPSRDQILFEP- 217
           +  + + G +G  NS  L   ++           V   D  N   + +  S  +IL    
Sbjct: 433 EARKPLDGRRGAVNSVALAAYKNGHLLASCTERVVDFWDFGNGEHQQVMRSPCRILCGGL 492

Query: 218 RFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             SPN+  +A  +Y+   D+          +  P      RS I     S +G+   ++ 
Sbjct: 493 AASPNRAYLAAGSYEGTVDLWHAPRKRIEQEPEPASWVEPRSPIDM-ALSPDGRTLAVA- 550

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISA-------SYSPDSSQIVFESDREGKEQLY 329
           Q  E + ++  D+++N          I+          S+SP    ++  S  +    + 
Sbjct: 551 QVGEDVLLW--DIETNELV----NPRIDTGHTTKILSVSFSPKHGAMLLSSGADCS--VR 602

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM-KKDGSQERLLVE 388
           V       +               WSP GD +  +        I  M  +D    ++L E
Sbjct: 603 VCDVKTGMRLHKFLGHTDWIGFSTWSPNGDYVV-SALDDGTIRIWKMGDRDEQGPQIL-E 660

Query: 389 DSNLQA--PTWSPSGRSLI 405
             +  A   ++SP G+ + 
Sbjct: 661 QGDCFATGVSFSPDGKHIA 679



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 53/184 (28%), Gaps = 12/184 (6%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R +       +    FSP   K             V + D +      +       I 
Sbjct: 568 NPR-IDTGHTTKILSVSFSP---KHGAMLLSSGADCSVRVCDVKTGMRLHKFLGHTDWIG 623

Query: 262 APRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFES 320
              +S NG   ++S   D  + I+ + D      + L          S+SPD   I    
Sbjct: 624 FSTWSPNGDY-VVSALDDGTIRIWKMGDRDEQGPQILEQGDCFATGVSFSPDGKHIATCG 682

Query: 321 DREGKEQLYVM--QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
              GK  ++      +G + K   +   +     + S     +     SG    I +   
Sbjct: 683 T-NGKVMVWASQKDESGWNLKHTLEGHRSYVLSVLISRDSKQVL---SSGADKTIRIWDI 738

Query: 379 DGSQ 382
           +   
Sbjct: 739 ESGD 742


>gi|311894241|dbj|BAJ26649.1| putative transcriptional regulator [Kitasatospora setae KM-6054]
          Length = 1287

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/234 (15%), Positives = 69/234 (29%), Gaps = 29/234 (12%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----- 246
             L + D  G   R +          P   P+   VA   +D      V L+         
Sbjct: 985  RLALWDVAGPEPRPIATG------TPDGVPSGVPVAALAFDRAGRTLVELLADGSVLVRD 1038

Query: 247  --DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFI 303
              D + + +     +  A   S +G    +S    + +              R  +    
Sbjct: 1039 PADGSVRAVQRVDGVPEAAALSPDGSALAVSTTGGDVLAGA---PDGTPLRLRWRDRHDH 1095

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLI 361
              S  + PD +++    D     ++ ++     D      D   +        SP G L+
Sbjct: 1096 VQSMVFLPDGTRLACAHD---SPRVGLLDLASPDPAMEKSDLLHQDLVRRVALSPDGRLL 1152

Query: 362  AFTKFSGEKFAIGVMKKDGSQER----LLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            A    +G    I +      + +        +  L    +SP GRS+  +  + 
Sbjct: 1153 A---TAGNDRLIRLWDTGTGRPQDEGERTTAEDTLLGLAFSPDGRSIAGATHEG 1203



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 71/218 (32%), Gaps = 22/218 (10%)

Query: 211  DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            D +      SP+   +A +T        V            R  +    + +  F  +G 
Sbjct: 1051 DGVPEAAALSPDGSALAVSTTGG----DVLAGAPDGTPLRLRWRDRHDHVQSMVFLPDGT 1106

Query: 271  RALISVQ--KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R   +    +   +D+ S D     ++ L     +    + SPD   +       G ++L
Sbjct: 1107 RLACAHDSPRVGLLDLASPDPAMEKSDLL--HQDLVRRVALSPDGRLLA----TAGNDRL 1160

Query: 329  YVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
              +   G+ + +        E +     +SP G  IA     G    +       +   L
Sbjct: 1161 IRLWDTGTGRPQDEGERTTAEDTLLGLAFSPDGRSIAGATHEGRLL-VWSATAPSAPVTL 1219

Query: 386  LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSID 422
                 +     +   GR+L+      GD G+  ++++D
Sbjct: 1220 TGPARSFGGLAFLSDGRALL-----GGDDGTAPVWTLD 1252



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 68/225 (30%), Gaps = 28/225 (12%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEP---R 218
            +   +  F + +  V     +      L     D       +YLT       +      
Sbjct: 581 RLGTARNPFATLLWSVEAHRTADAGVPELRRAADDAVLSTQAQYLTGRIPGFRWGVNGLA 640

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALI 274
            SP+ + VA      +   RV L D R       +   +  +  P     FS +G    +
Sbjct: 641 LSPDGRLVA----TGDAQGRVSLWDARTTAP---VAELQGEVRHPVQDVEFSPDGTVLAV 693

Query: 275 SVQKDEAMDIYSVDLQSNA-------TERLTNTLFINISASYSPDSSQIVFES---DREG 324
           ++  D+   +    +   A          +T         ++S D + +   S   D  G
Sbjct: 694 TLTNDKDRHVLLWRVADRAPLPSPVMPPSITGKPTSAKRLAFSADGALLAAGSGDPDLPG 753

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +  ++   +  +   R   +   +     + P G L+A     G 
Sbjct: 754 RVWVWRTDAGAAPPVRTLLEHTGAIQGLAFGP-GHLLASADSDGG 797


>gi|293360479|ref|XP_002729827.1| PREDICTED: rCG49027-like [Rattus norvegicus]
          Length = 477

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 57/151 (37%), Gaps = 6/151 (3%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             ++ I +  FS N K+   +   D  + ++S+   + A   +     +  S  +SP  +
Sbjct: 16  GHKAAITSADFSPNCKQIA-TASWDTFLMLWSLKPHARAYRYV-GHKDVVTSLQFSPQGN 73

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S R+   +L+V+   G   +   +   A      +S  G  +  T    +   + 
Sbjct: 74  LLASAS-RDKTVRLWVLDRKGKSSE--FKAHTAPVRSVDFSADGQFLV-TASEDKSIKVW 129

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            M +      L      ++   +SP GR ++
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 57/181 (31%), Gaps = 19/181 (10%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+     S+ V         Y        +   +FSP+ + +   + D      + + DT
Sbjct: 118 VTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK----TIKIWDT 173

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--- 301
              +      +         FS NG     S   D A+ I+ + +      RL       
Sbjct: 174 TSKQCVNNFSDSVGFANFVDFSPNGTCIA-SAGSDHAVRIWDIRMN-----RLLQHYQVH 227

Query: 302 --FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              +N   S+ P  + +V  +  +G   + ++           Q      F   +S  G+
Sbjct: 228 SCGVNC-LSFHPSGNSLV-TASSDGT--VKILDLVEGRLIYTLQGHTGPVFTVSFSKDGE 283

Query: 360 L 360
           L
Sbjct: 284 L 284



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 SA +SP+  QI   +  +    L+ ++ +    + +    +       +SPQG+
Sbjct: 17  HKAAITSADFSPNCKQIA-TASWDTFLMLWSLKPHARAYRYV--GHKDVVTSLQFSPQGN 73

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           L+A      +   + V+ + G         + +++  +S  G+ L+ + +   D   K++
Sbjct: 74  LLASASRD-KTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASE---DKSIKVW 129

Query: 420 SI 421
           S+
Sbjct: 130 SM 131


>gi|293348577|ref|XP_002726928.1| PREDICTED: rCG49027-like [Rattus norvegicus]
 gi|149067084|gb|EDM16817.1| rCG49027 [Rattus norvegicus]
          Length = 477

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 57/151 (37%), Gaps = 6/151 (3%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             ++ I +  FS N K+   +   D  + ++S+   + A   +     +  S  +SP  +
Sbjct: 16  GHKAAITSADFSPNCKQIA-TASWDTFLMLWSLKPHARAYRYV-GHKDVVTSLQFSPQGN 73

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S R+   +L+V+   G   +   +   A      +S  G  +  T    +   + 
Sbjct: 74  LLASAS-RDKTVRLWVLDRKGKSSE--FKAHTAPVRSVDFSADGQFLV-TASEDKSIKVW 129

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            M +      L      ++   +SP GR ++
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 57/181 (31%), Gaps = 19/181 (10%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+     S+ V         Y        +   +FSP+ + +   + D      + + DT
Sbjct: 118 VTASEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDK----TIKIWDT 173

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--- 301
              +      +         FS NG     S   D A+ I+ + +      RL       
Sbjct: 174 TSKQCVNNFSDSVGFANFVDFSPNGTCIA-SAGSDHAVRIWDIRMN-----RLLQHYQVH 227

Query: 302 --FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              +N   S+ P  + +V  +  +G   + ++           Q      F   +S  G+
Sbjct: 228 SCGVNC-LSFHPSGNSLV-TASSDGT--VKILDLVEGRLIYTLQGHTGPVFTVSFSKDGE 283

Query: 360 L 360
           L
Sbjct: 284 L 284



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 SA +SP+  QI   +  +    L+ ++ +    + +    +       +SPQG+
Sbjct: 17  HKAAITSADFSPNCKQIA-TASWDTFLMLWSLKPHARAYRYV--GHKDVVTSLQFSPQGN 73

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           L+A      +   + V+ + G         + +++  +S  G+ L+ + +   D   K++
Sbjct: 74  LLASASRD-KTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTASE---DKSIKVW 129

Query: 420 SI 421
           S+
Sbjct: 130 SM 131


>gi|315122952|ref|YP_004064958.1| dipeptidyl-peptidase IV [Pseudoalteromonas sp. SM9913]
 gi|315016712|gb|ADT70049.1| dipeptidyl-peptidase IV [Pseudoalteromonas sp. SM9913]
          Length = 778

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 60/401 (14%), Positives = 133/401 (33%), Gaps = 73/401 (18%)

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW--DVKDRKQIIGKKF 144
             +    P +I  +Q W+  G  ++V     +  + R R +F L   +    +Q+ GK  
Sbjct: 121 LPEGADEPFAIESYQ-WSKDGKWLMVFTNSEQVWRSRSRGDFWLLNLETNQLQQLGGK-- 177

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDG-- 200
              P          S D            +S++ +V ++ +    +  N +  +  DG  
Sbjct: 178 DVEPTKLMFA--KFSPD------------SSKVAYVRDNNIYMQSVGSNDVTALTTDGCA 223

Query: 201 ----ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----- 251
                N  ++      I    R+SP+ + +AY   D  D+    +++   +  P      
Sbjct: 224 TIVNGNFDWVYEEEFTIADGFRWSPDNKSIAYWQLDTSDVKFFTMINNTDELYPTLKEFP 283

Query: 252 --RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSN--------------- 292
             + G   S +     S + K+   +  + +  D Y   +                    
Sbjct: 284 YPKAGETNSAVRVGVVSLSDKQTRWAELEGDNRDRYIPRISWAGTGNELMIQDLNRPQSH 343

Query: 293 --------ATERLT------NTLFINIS--ASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                     ++LT      +  FI     A++S D    ++ S+R+G   LY +  +G 
Sbjct: 344 NKVWLFDWQKQQLTKILEDKDDAFIEWFYKANWSKDGEFFIWHSERDGWRHLYRVSRDGK 403

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
               ++            +   +++ F        +  +     DGS + + V  +  + 
Sbjct: 404 TIIDLTPGDYDIIDMLTINEDKNVMYFIASPNDPGQRYLYSTPLDGSSKPVRVTPAEFEG 463

Query: 394 --APTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLI 431
             +   S      + +  K G     ++  +  +   +TL+
Sbjct: 464 SNSYYMSKDASWAMHTYSKFGTPPTKEIIKVSDHSNVKTLV 504



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 111/347 (31%), Gaps = 64/347 (18%)

Query: 158 ISDDIYQSITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRD---QI 213
            + + YQ     K      ++F  SE V     +    +++ +  N       +D     
Sbjct: 129 FAIESYQWSKDGKWL----MVFTNSEQVWRSRSRGDFWLLNLE-TNQLQQLGGKDVEPTK 183

Query: 214 LFEPRFSPNQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRI-GNFR-------SMILA 262
           L   +FSP+  KVAY        + +    +     D     + GNF        ++   
Sbjct: 184 LMFAKFSPDSSKVAYVRDNNIYMQSVGSNDVTALTTDGCATIVNGNFDWVYEEEFTIADG 243

Query: 263 PRFSSNGKRALISVQKDEAMDIYSV------------------DLQSNATERLT------ 298
            R+S + K           +  +++                    ++N+  R+       
Sbjct: 244 FRWSPDNKSIAYWQLDTSDVKFFTMINNTDELYPTLKEFPYPKAGETNSAVRVGVVSLSD 303

Query: 299 -NTLFINISA----------SYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDK 345
             T +  +            S++   ++++ +  +  +   ++++         +I +DK
Sbjct: 304 KQTRWAELEGDNRDRYIPRISWAGTGNELMIQDLNRPQSHNKVWLFDWQKQQLTKILEDK 363

Query: 346 EAS----YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           + +    ++   WS  G+   +         +  + +DG     L           + + 
Sbjct: 364 DDAFIEWFYKANWSKDGEFFIWHSERDGWRHLYRVSRDGKTIIDLTPGDYDIIDMLTINE 423

Query: 402 RS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
               + F    +      LYS  L+G ++ +  TPA   +     +M
Sbjct: 424 DKNVMYFIASPNDPGQRYLYSTPLDGSSKPVRVTPAEF-EGSNSYYM 469



 Score = 43.1 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 46/135 (34%), Gaps = 29/135 (21%)

Query: 325 KEQLYVMQSNGSDQKRISQ---------DKEASYFDPVWSPQGDLI--------AFTKFS 367
              +    ++G+ +K + +         D+  +     WS  G  +         +   S
Sbjct: 98  GNDIVFYNADGTGRKVLVEFEKLLPEGADEPFAIESYQWSKDGKWLMVFTNSEQVWRSRS 157

Query: 368 GEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              F   ++  + +Q + L    VE + L    +SP    + + R       + +Y   +
Sbjct: 158 RGDF--WLLNLETNQLQQLGGKDVEPTKLMFAKFSPDSSKVAYVRD------NNIYMQSV 209

Query: 424 NGRNETLINTPAYAS 438
              + T + T   A+
Sbjct: 210 GSNDVTALTTDGCAT 224


>gi|291301750|ref|YP_003513028.1| hypothetical protein Snas_4286 [Stackebrandtia nassauensis DSM
           44728]
 gi|290570970|gb|ADD43935.1| hypothetical protein Snas_4286 [Stackebrandtia nassauensis DSM
           44728]
          Length = 320

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 56/169 (33%), Gaps = 10/169 (5%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F++          +            D           +   +   F+ +     YAT
Sbjct: 148 GRFSTTAGIYDLKTKAHYGSLEDFTAYVD----DKKFERENLNYWGITFTDDGHT-FYAT 202

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               D         R D   K +   R  +  P  S +G R     +  +   ++ ++L+
Sbjct: 203 MASGDT----TWLIRGDLRDKTLTALRENVECPSLSPDGTRIAYKHRDGDRWRLHVLNLK 258

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           S     L+    I+  A++  D+  + +    + K  ++ ++++G  + 
Sbjct: 259 SGKDTALSEKAHIDDQAAWL-DNHTVGYAKSHDDKPAVFTVEADGGGKP 306



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 72/199 (36%), Gaps = 36/199 (18%)

Query: 264 RFSSNGKRALISVQKDEAMDIY---------SVDLQS----NATERLT------------ 298
           R S++G+    +V ++    +            DL++     + E  T            
Sbjct: 125 RMSADGRFVAWTVFREGDSYMANGRFSTTAGIYDLKTKAHYGSLEDFTAYVDDKKFEREN 184

Query: 299 -NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            N   I    +++ D     F +     +  ++++ +  D K ++  +E +   P  SP 
Sbjct: 185 LNYWGI----TFTDDGHT--FYATMASGDTTWLIRGDLRD-KTLTALRE-NVECPSLSPD 236

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGS 416
           G  IA+    G+++ + V+     ++  L E ++      W     ++ +++  D     
Sbjct: 237 GTRIAYKHRDGDRWRLHVLNLKSGKDTALSEKAHIDDQAAWL-DNHTVGYAKSHDDKPAV 295

Query: 417 KLYSIDLNGRNETLINTPA 435
                D  G+   L+   +
Sbjct: 296 FTVEADGGGKPHRLLAGSS 314


>gi|237726169|ref|ZP_04556650.1| peptidase [Bacteroides sp. D4]
 gi|229435977|gb|EEO46054.1| peptidase [Bacteroides dorei 5_1_36/D4]
          Length = 747

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 93/296 (31%), Gaps = 64/296 (21%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-----IGNFR 257
            ++     D+    P  SP+ + +A+          +Y+ +    +  +      +GN+ 
Sbjct: 151 QKHWMEVDDEKTASPVPSPDGKWIAFI-----KNQNIYVKEVATGKEKQLSLDGTLGNYY 205

Query: 258 SMILAPRFSSNGKRAL------------ISVQKDEAMDI--------------------- 284
           S  +  R+S + K+                V+   A  +                     
Sbjct: 206 SAYI--RWSPDSKKVASCKIRPVEKRYVYYVESSPADQLQPKLHKQEYAKPGDELPFKVP 263

Query: 285 YSVDLQSNAT----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQ 338
              +++S  +      L +  +      ++PDS  + FE ++ G +   V  + +     
Sbjct: 264 CIYEVESGRSIIPSTELFDRQYEVYGPEWNPDSRAVTFEYNQRGHQVYRVLELSAETGKV 323

Query: 339 KRI---SQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNL 392
           + +   + DK  +Y          G  + +         + +  +  +Q    + +    
Sbjct: 324 RPLVEETSDKYVNYTRHFRHDLKDGKQMIWMSERDNWNHLYMYNRITAQPDYQITKGEWY 383

Query: 393 --QAPTWSPSGRSLIFSRK--KDGDTGSKL--YSIDLNGRNETLINTPAYASDPQW 442
             +        R + FS    + G+    +  Y I  +G+  T + TP       W
Sbjct: 384 VREVLRVDEDNRQIYFSANGMEAGEDPYLIRYYRIGFDGKGLTCL-TPEEGMHRAW 438



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 68/194 (35%), Gaps = 18/194 (9%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRF 265
            R   ++ P ++P+ + V +        +   L  +      + +    + + +     F
Sbjct: 282 DRQYEVYGPEWNPDSRAVTFEYNQRGHQVYRVLELSAETGKVRPLVEETSDKYVNYTRHF 341

Query: 266 S---SNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINIS-ASYSPDSSQIVFES 320
                +GK+ +   ++D    +Y  +  +     ++T   +          D+ QI F +
Sbjct: 342 RHDLKDGKQMIWMSERDNWNHLYMYNRITAQPDYQITKGEWYVREVLRVDEDNRQIYFSA 401

Query: 321 D--REGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +    G++    + Y +  +G     ++ ++        +S     +       +K  + 
Sbjct: 402 NGMEAGEDPYLIRYYRIGFDGKGLTCLTPEEGMHRAW--FSGDMKYLVDVYSMVDKVPVA 459

Query: 375 VMK--KDGSQERLL 386
           V++  +DG     L
Sbjct: 460 VLRSARDGKVVMPL 473


>gi|241206369|ref|YP_002977465.1| WD-40 repeat protein [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860259|gb|ACS57926.1| WD-40 repeat protein [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 329

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 45/263 (17%), Positives = 88/263 (33%), Gaps = 24/263 (9%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            +D     I      + S++    +  V+     S  V   DG    +      + L   
Sbjct: 73  AADGSVSEIATAPRKWISQVAAGPQGAVAYSYGKSSLVRLADGTTKEFAEERTVEGL--- 129

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P   ++A A Y+      V L    ++  P  +  ++       FS +G   + S+Q
Sbjct: 130 AFAPKGLRIAAARYNG-----VSLHWIGMNAKPVDL-EWKGAHTGVTFSPDGNFLVTSMQ 183

Query: 278 KDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ A+  + +D++     R   +T       S S+S     +       G     V    
Sbjct: 184 EN-ALHGWKLDIKPGTEARHMRMTGYPAKVKSLSWSVKGKWLA----SSGAPAAIVWPFQ 238

Query: 335 GSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           G D         +            + P  D++A     G   A+ +     +  R   +
Sbjct: 239 GKDGPMGKAPMELGTRANIMATAVKFHPLEDILAIGFIDGMILAVRITDSKEALLRRPGK 298

Query: 389 DSNLQAPTWSPSGRSLIFSRKKD 411
              + A +WS +G+ L F  +  
Sbjct: 299 -GAITAMSWSKNGKLLAFGSEAG 320



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 81/248 (32%), Gaps = 29/248 (11%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V    Q     +    +S  ++A   + +  +  T E   F  + L ++ +  +G+    
Sbjct: 92  VAAGPQ-GAVAYSYGKSSLVRLADGTTKEFAEERTVEGLAFAPKGLRIAAARYNGVS--- 147

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK- 251
              +   G N + +            FSP+   +   T   E+ L  + +D +     + 
Sbjct: 148 ---LHWIGMNAKPVDLEWKGAHTGVTFSPDGNFL--VTSMQENALHGWKLDIKPGTEARH 202

Query: 252 -RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-------TERLTNTLFI 303
            R+  + + + +  +S  GK    S     A        Q           E  T    +
Sbjct: 203 MRMTGYPAKVKSLSWSVKGKWLASS----GAPAAIVWPFQGKDGPMGKAPMELGTRANIM 258

Query: 304 NISASYSPDSSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +  + P    +   F         +  ++   S +  + +  + +     WS  G L+
Sbjct: 259 ATAVKFHPLEDILAIGFI-----DGMILAVRITDSKEALLRRPGKGAITAMSWSKNGKLL 313

Query: 362 AFTKFSGE 369
           AF   +G+
Sbjct: 314 AFGSEAGD 321


>gi|46117490|ref|XP_384763.1| hypothetical protein FG04587.1 [Gibberella zeae PH-1]
          Length = 1775

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 62/186 (33%), Gaps = 18/186 (9%)

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESD 321
            FS +GK    SV     +   S++ +  +  R   L           +SP+ +  ++ + 
Sbjct: 1219 FSPDGKLVAASVGSSIRIQEVSIEGEHYSLPRTSDLPGHSDAIDGLCFSPEGNGQMYLAS 1278

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-- 379
                    +      + + + +   +      +SP G ++A T  +    AI   +    
Sbjct: 1279 GSDDTTACIWNLITGEIEVVLKGHSSHINSVSFSPDGTILA-TASTDSNIAIWKQRLGSW 1337

Query: 380  GSQE-----RLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            GS       + L    S + +  ++P G  L        D  ++++ +      E    T
Sbjct: 1338 GSGVLDIPDQTLSGHTSLVWSIAFAPDGNLLA---SAGNDGEARIWEVI---EREQQPGT 1391

Query: 434  PAYASD 439
                 D
Sbjct: 1392 DNDTRD 1397



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 90/287 (31%), Gaps = 35/287 (12%)

Query: 159  SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            SD I       +G+    +        SG    + C+ +     I  +       +    
Sbjct: 1258 SDAIDGLCFSPEGNGQMYLA-------SGSDDTTACIWNLITGEIEVVLKGHSSHINSVS 1310

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDR----APKRIGNFRSMILAPRFSSNGKRALI 274
            FSP+   +A A+ D    +    + +          + +    S++ +  F+ +G     
Sbjct: 1311 FSPDGTILATASTDSNIAIWKQRLGSWGSGVLDIPDQTLSGHTSLVWSIAFAPDGNLLA- 1369

Query: 275  SVQKDEAMDIYSV------DLQSNATERLTNTLFI-----NISA----SYSPDSSQIVFE 319
            S   D    I+ V          N T   T+         ++S     S SPD   I   
Sbjct: 1370 SAGNDGEARIWEVIEREQQPGTDNDTRDDTSEASNSVRKEHVSPVVRVSTSPDGKTIA-S 1428

Query: 320  SDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM-K 377
              R+GK  + +     G+  + +           V+S  G+ +  T          V  +
Sbjct: 1429 GCRDGK--ICLWNGVTGAWCRTMEARHTGEVTALVFSDDGETLISTSVDESAIVWSVSEE 1486

Query: 378  KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +    RL+  +  ++    S  G+    +     D    L+ I  +
Sbjct: 1487 SETPSLRLIGHEDWVRGAAISLDGK---LAATASDDWNVLLWDISAH 1530


>gi|114647207|ref|XP_001156806.1| PREDICTED: WD SOCS-box protein 2 isoform 1 [Pan troglodytes]
          Length = 406

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 83/216 (38%), Gaps = 23/216 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D+
Sbjct: 121 PDVSCLVLATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDK 178

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 179 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 235

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----------- 389
             +  ++S     +SP   L+    +      I      G + R L              
Sbjct: 236 KLEGHQSSVVSCDFSPDSALLVTASYDTN--VIMWDPYTGERLRSLHHTQVDPAMDDSDV 293

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S+L++  +SP G   ++      D   ++++++L
Sbjct: 294 HISSLRSVCFSPEG---LYLATVADDRLLRIWALEL 326



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 72/247 (29%), Gaps = 41/247 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 18  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKN 77

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKRA---------------LISVQKDEAM 282
           +T+   +PK            +  +P  S   ++                L +   D  +
Sbjct: 78  ETKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLVLATGLNDGQI 137

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 138 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 196

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 197 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 254

Query: 403 SLIFSRK 409
            L+ +  
Sbjct: 255 LLVTASY 261


>gi|116181204|ref|XP_001220451.1| hypothetical protein CHGG_01230 [Chaetomium globosum CBS 148.51]
 gi|88185527|gb|EAQ92995.1| hypothetical protein CHGG_01230 [Chaetomium globosum CBS 148.51]
          Length = 517

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/287 (11%), Positives = 80/287 (27%), Gaps = 62/287 (21%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G   N+  + D D    ++        +    +SP+ +++A  + D      V 
Sbjct: 159 SSRLATGSGDNTARIWDTDSGTPKHTLKGHTGWVLGVNWSPDGKQLATCSMDK----TVR 214

Query: 241 LMDTRIDRAPKRIGNFRSM---ILAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSN 292
           + D    +   +  +F+     +L   +       +G   L+S  KD    I+ V+    
Sbjct: 215 IWDPETGKPVGQ--DFKGHAKWVLGVAWEPYHLWRDGTARLVSASKDGTCRIWVVN-SGR 271

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L+          +    + +++    +  + + V  +                   
Sbjct: 272 TEHVLSGHKGSVSCVRWG--GTGMIYTGSHD--KAVRVWDAVKGTLVHSFTAHGHWVNHI 327

Query: 353 VWSPQ------------------------------------GDLIAFTKFSGEKFAIGVM 376
             S                                      G +      + + F + + 
Sbjct: 328 ALSSDHALRTAYFDHTKEIPDTEEGKRAKAKERFEKAAKIQGKVAERIVSASDDFTMYLW 387

Query: 377 KKDGSQ----ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
               +      RLL   + +    +SP G  +        D  +KL+
Sbjct: 388 DPTNNGNKPVARLLGHQNKVNQVQFSPDGTLIA---SAGWDNSTKLW 431



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 49/138 (35%), Gaps = 7/138 (5%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +++  A+ D    + ++      ++   R+   ++ +   +FS +G     S   D +  
Sbjct: 373 ERIVSASDDF--TMYLWDPTNNGNKPVARLLGHQNKVNQVQFSPDGTLIA-SAGWDNSTK 429

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +++        + L   +      ++S DS  +V  S       L V  +   +      
Sbjct: 430 LWNA-RDGKFLKSLRGHVAPVYQCAWSADSRLLVTGSK---DCTLKVWNARNGNLAMDLP 485

Query: 344 DKEASYFDPVWSPQGDLI 361
             E   +   W+  G ++
Sbjct: 486 GHEDEVYAVDWAADGKMV 503



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 53/171 (30%), Gaps = 19/171 (11%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           ++ V   S    R+       ++  +SP +S  +      G     +  ++    K   +
Sbjct: 129 VFKVHAVSRLAHRIPGHGQPILACQFSPINSSRLATG--SGDNTARIWDTDSGTPKHTLK 186

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-----PTWS 398
                     WSP G  +A          + +   +  +   + +D    A       W 
Sbjct: 187 GHTGWVLGVNWSPDGKQLATCSMDKT---VRIWDPETGKP--VGQDFKGHAKWVLGVAWE 241

Query: 399 P-----SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           P      G + + S  KDG    +++ ++       L       S  +W G
Sbjct: 242 PYHLWRDGTARLVSASKDGT--CRIWVVNSGRTEHVLSGHKGSVSCVRWGG 290


>gi|163848457|ref|YP_001636501.1| hypothetical protein Caur_2913 [Chloroflexus aurantiacus J-10-fl]
 gi|222526385|ref|YP_002570856.1| hypothetical protein Chy400_3151 [Chloroflexus sp. Y-400-fl]
 gi|163669746|gb|ABY36112.1| hypothetical protein Caur_2913 [Chloroflexus aurantiacus J-10-fl]
 gi|222450264|gb|ACM54530.1| conserved hypothetical protein [Chloroflexus sp. Y-400-fl]
          Length = 575

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 88/281 (31%), Gaps = 51/281 (18%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R   V  S     I N   +   D A+    +   ++  +   ++ +    AYA   +  
Sbjct: 114 RDWAVDASGRQIAIANDQGISIVDRASGVVRSVVNNRTAYGLSWTSDGLSFAYAAASEAP 173

Query: 236 ILRVYLM---------DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           +L                 I   P            P F+S+G+R   +           
Sbjct: 174 VLPFDWERWSRWCAAATVYIVDLPSATERTIGPGCDPVFASDGRRLAYATPPTMQPAFLP 233

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
              Q+NA  +L N    N   +++P                     ++G      S D+ 
Sbjct: 234 FPGQTNAI-QLVNRAGAN---AWNP-------------------ATADG------SPDQG 264

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVM------KKDGSQERLLVEDSNLQAPTWSPS 400
              + P WSP    +A+ +F G +  + +          G  E +L      + P ++P 
Sbjct: 265 YLVYAPAWSPDARELAYQRFLGYQALVDINLTMIADSSAGGGEPVLAGAGWHRPPAFAPD 324

Query: 401 GRSLI-----FSRKKD--GDTGSKLYSIDLNGRNETLINTP 434
           G  +      FS  +   G    KLY ++L G     +   
Sbjct: 325 GERVAIIEYNFSDARGFTGYDIWKLYLVELRGERTEFLPGG 365



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 91/241 (37%), Gaps = 45/241 (18%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-----TPSRDQI 213
            D ++ S            +  +     G   N++ +++R GAN         +P +  +
Sbjct: 208 CDPVFASDGRRLAYATPPTMQPAFLPFPGQT-NAIQLVNRAGANAWNPATADGSPDQGYL 266

Query: 214 LFEPRFSPNQQKVAYATYDDEDIL---RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           ++ P +SP+ +++AY  +     L    + ++        + +         P F+ +G+
Sbjct: 267 VYAPAWSPDARELAYQRFLGYQALVDINLTMIADSSAGGGEPVLAGAGWHRPPAFAPDGE 326

Query: 271 RALIS---------VQKDEAMDIYSVDLQSNATE-----------RLTNTLFINISASYS 310
           R  I              +   +Y V+L+   TE           +L   +   ++A++S
Sbjct: 327 RVAIIEYNFSDARGFTGYDIWKLYLVELRGERTEFLPGGDLTLRGQLIARIPRIVAAAWS 386

Query: 311 PDSSQIVF--------ESD-------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           PD S +           +D        EG  +++ +   G+ Q+R++   + +    VW+
Sbjct: 387 PDGSSLAVLAPAAWNPTADANNPLYANEGMGEIWQLLPQGTPQRRLTTAVDYA-SSLVWA 445

Query: 356 P 356
           P
Sbjct: 446 P 446


>gi|297816196|ref|XP_002875981.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321819|gb|EFH52240.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 83/221 (37%), Gaps = 15/221 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAP 263
               S  + +   +FS + + +A A+ D       V   +  I    +      + I   
Sbjct: 18  QTLTSHIRAVSSVKFSSDGRLLASASADKTIRTYTVNTENETIAEPVREFTGHENGISDV 77

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDR 322
            FSS+ +  + S   D+ + ++  D+++ +  + L          +++P S+ IV  S  
Sbjct: 78  AFSSDARFIV-SASDDKTLKLW--DVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSF- 133

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              E + +         ++            ++  G LI  + + G    I      G  
Sbjct: 134 --DETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDG-LCRIW-DSGTGHC 189

Query: 383 ERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + L++D N  +    +SP+G+ ++       D   +L++I
Sbjct: 190 IKTLIDDENPPVSFVRFSPNGKFILVGTL---DNTLRLWNI 227



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 60/170 (35%), Gaps = 14/170 (8%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA----TERLTNTLFIN 304
             + + +    + + +FSS+G+    S   D+ +  Y+V+ ++          T      
Sbjct: 16  HSQTLTSHIRAVSSVKFSSDGRLLA-SASADKTIRTYTVNTENETIAEPVREFTGHENGI 74

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              ++S D+  IV  SD    + L +         +         F   ++PQ ++I   
Sbjct: 75  SDVAFSSDARFIVSASD---DKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSG 131

Query: 365 KFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            F      + +      +  + L      + A  ++  G  ++ S   DG
Sbjct: 132 SFDET---VRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIV-SSSYDG 177


>gi|170586452|ref|XP_001897993.1| F-box-like/WD-repeat protein ebi [Brugia malayi]
 gi|158594388|gb|EDP32972.1| F-box-like/WD-repeat protein ebi, putative [Brugia malayi]
          Length = 687

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 85/239 (35%), Gaps = 51/239 (21%)

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA---SWRKIAHTIS 159
           WN  G       +++  G D+  +   +WD     Q+   +F SS A    W      +S
Sbjct: 447 WNQKG------DKILSAGVDKTTI---VWDPLKGIQVQVFQFHSSSALDVDW------MS 491

Query: 160 DDIYQSITGEK-------GDFNSRILFVSESVVSGIIKNSLC--------------VMDR 198
           DD + S + +        G       F   +     +K  +               V   
Sbjct: 492 DDTFASCSTDMCIHVCKLGCEKPLKTFQGHTNEVNAVKYDVYSRLLASCSDDMTLKVWSM 551

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           +  N+ +   + D+ ++  R+SP    +A A++D      V L D       + +     
Sbjct: 552 NYENVVHNLKAHDKEIYTIRWSPIGYTLASASFDH----TVRLWDIERGMCVRTLTKHTE 607

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-----LTNTLFINISASYSPD 312
            + +  FS +GK    S   D ++ I+  D+QS    +     L++     +  ++  D
Sbjct: 608 PVYSVGFSPDGKYIA-SGSFDRSVYIW--DVQSGKLIQSHTGSLSDGGIFEVGWNFRGD 663



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 77/255 (30%), Gaps = 27/255 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G       V   DG  +RY   +    +F  +++    K+  A  D        + D  
Sbjct: 415 TGCYDGYARVWATDG-RLRYTLGAHKGPIFALKWNQKGDKILSAGVDK----TTIVWDPL 469

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--I 303
                +      S  L   + S+   A  S   D  + +  +       + L        
Sbjct: 470 KGIQVQVFQFHSSSALDVDWMSDDTFA--SCSTDMCIHVCKL----GCEKPLKTFQGHTN 523

Query: 304 NISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            ++A  Y   S  +   SD      L V   N  +     +  +   +   WSP G  +A
Sbjct: 524 EVNAVKYDVYSRLLASCSD---DMTLKVWSMNYENVVHNLKAHDKEIYTIRWSPIGYTLA 580

Query: 363 FTKFSGEKFAIGVMKKDGSQ-ERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              F      + +   +     R L      + +  +SP G+ +       G     +Y 
Sbjct: 581 SASFD---HTVRLWDIERGMCVRTLTKHTEPVYSVGFSPDGKYIA-----SGSFDRSVYI 632

Query: 421 IDLNGRNETLINTPA 435
            D+        +T +
Sbjct: 633 WDVQSGKLIQSHTGS 647


>gi|197245766|gb|AAI68527.1| LOC100037096 protein [Xenopus laevis]
          Length = 698

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT   +  K +      +   
Sbjct: 385 QQVLTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYL 444

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 445 AWSPDDNYLIACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 503

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 504 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 552

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 553 --DLTDRNIVQEDHPIMSFTISRNGR 576


>gi|206975984|ref|ZP_03236894.1| tolB domain protein [Bacillus cereus H3081.97]
 gi|217961844|ref|YP_002340414.1| tolB domain protein [Bacillus cereus AH187]
 gi|222097799|ref|YP_002531856.1| tolb domain protein [Bacillus cereus Q1]
 gi|206745736|gb|EDZ57133.1| tolB domain protein [Bacillus cereus H3081.97]
 gi|217064251|gb|ACJ78501.1| tolB domain protein [Bacillus cereus AH187]
 gi|221241857|gb|ACM14567.1| possible tolB domain protein [Bacillus cereus Q1]
          Length = 410

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 87/253 (34%), Gaps = 61/253 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY     +  L +Y +     +
Sbjct: 35  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSHDGEWLAYVKGKKQGSLELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 +++ D++        NT F N+SA 
Sbjct: 86  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLHTFDVEKK------NTDFENVSAG 135

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD  +    S+       +     G+    + +D   +               
Sbjct: 136 VGDYAWYPDGKKFFVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 191

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQ 393
                      WSP    I+F       +S +   + +++ DGS+     ++L+     +
Sbjct: 192 DFLALVASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK 251

Query: 394 APTWSPSGRSLIF 406
              W+P+   L +
Sbjct: 252 ---WAPANNILAY 261



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAF +       + + K DG +E+ L +   +  P WS  G  L + + K      +LY
Sbjct: 30  KIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSHDGEWLAYVKGKK-QGSLELY 82

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 83  RLK-DGKKVTPFHS--EASNYQWSP 104



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 52/131 (39%), Gaps = 18/131 (13%)

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAI 373
           +I F    +    L++ + +G + K++++ +      P WS  G+ +A+ K        +
Sbjct: 30  KIAFIRHHD----LWI-KVDGKE-KQLTKGEY--ITGPKWSHDGEWLAYVKGKKQGSLEL 81

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             +K DG +      +++     WSP+   + F           L++ D+  +N    N 
Sbjct: 82  YRLK-DGKKVTPFHSEASNY--QWSPTENIIAFI------FTGTLHTFDVEKKNTDFENV 132

Query: 434 PAYASDPQWVG 444
            A   D  W  
Sbjct: 133 SAGVGDYAWYP 143


>gi|134035357|sp|Q28D01|WDR26_XENTR RecName: Full=WD repeat-containing protein 26
          Length = 614

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT   +  K +      +   
Sbjct: 301 QQVLTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYL 360

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 361 AWSPDDNYLIACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 419

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 420 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 468

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 469 --DLTDRNIVQEDHPIMSFTISRNGR 492


>gi|134024531|gb|AAI36093.1| LOC733878 protein [Xenopus (Silurana) tropicalis]
          Length = 608

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT   +  K +      +   
Sbjct: 300 QQVLTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYL 359

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 360 AWSPDDNYLIACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 418

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 419 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 467

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 468 --DLTDRNIVQEDHPIMSFTISRNGR 491


>gi|122936386|gb|AAI30198.1| LOC100037096 protein [Xenopus laevis]
          Length = 596

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT   +  K +      +   
Sbjct: 288 QQVLTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYL 347

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 348 AWSPDDNYLIACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 406

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 407 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 455

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 456 --DLTDRNIVQEDHPIMSFTISRNGR 479


>gi|113931270|ref|NP_001039080.1| WD repeat-containing protein 26 [Xenopus (Silurana) tropicalis]
 gi|89267447|emb|CAJ81593.1| WD repeat domain 26 [Xenopus (Silurana) tropicalis]
          Length = 523

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 73/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT   +  K +      +   
Sbjct: 210 QQVLTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHQLKLLKTLEGHAYGVSYL 269

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 270 AWSPDDNYLIACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 328

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 329 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 377

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 378 --DLTDRNIVQEDHPIMSFTISRNGR 401


>gi|320162484|ref|YP_004175709.1| hypothetical protein ANT_30830 [Anaerolinea thermophila UNI-1]
 gi|319996338|dbj|BAJ65109.1| hypothetical protein ANT_30830 [Anaerolinea thermophila UNI-1]
          Length = 672

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 54/182 (29%), Gaps = 53/182 (29%)

Query: 284 IYSVDLQSNATER--LTNTL------FINISASYSPDSSQIVFESDRE------GKEQLY 329
           +  ++    +     LT T               S D   + F SD           Q+Y
Sbjct: 234 LSLINAADGSVTNKLLTRTPSGGSINGDAWHPVVSYDGRWVAFTSDASNLIPGVSGIQVY 293

Query: 330 VMQSNGSD-------------QKRISQDKEASY--FDPVWSPQGDLIAFTKF-------- 366
           +M  +  +               R +  K  +   F P  S  G  IAFT          
Sbjct: 294 LMDRDADNDGILDNTLPVYRLVSRAADGKPGNAMSFYPALSADGRYIAFTSDASNLETQN 353

Query: 367 ------SGEKFAIGVMKKDGSQERLLV------EDSNLQAPTWSP----SGRSLIFSRKK 410
                 +  K  + +  +   +  L+        D  L+ P++SP     GR + F+ + 
Sbjct: 354 PALPADTNGKRDVYLWDRLSGRTHLISVRYHTDPDQALEEPSFSPTISADGRWIAFTSEA 413

Query: 411 DG 412
             
Sbjct: 414 GN 415



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 72/240 (30%), Gaps = 55/240 (22%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM---DRDGANIRYLTP------SRD 211
            IY      +  F S    +   +  G  K  L +      DG+    L        S +
Sbjct: 200 AIYTEGGNPRVIFQSDASNLDLGLTDGNHKRDLYLSLINAADGSVTNKLLTRTPSGGSIN 259

Query: 212 QILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFR--------- 257
              + P  S + + VA+ +           ++VYLMD   D                   
Sbjct: 260 GDAWHPVVSYDGRWVAFTSDASNLIPGVSGIQVYLMDRDADNDGILDNTLPVYRLVSRAA 319

Query: 258 ------SMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                 +M   P  S++G+    +    +      ++   +                   
Sbjct: 320 DGKPGNAMSFYPALSADGRYIAFTSDASNLETQNPALPADT------------------- 360

Query: 311 PDSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +  + V+  DR  G+  L  ++ +    + +    E   F P  S  G  IAFT  +G 
Sbjct: 361 -NGKRDVYLWDRLSGRTHLISVRYHTDPDQAL----EEPSFSPTISADGRWIAFTSEAGN 415



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 85/279 (30%), Gaps = 70/279 (25%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDE------------DILRVYLMDTRIDRAPKRIGN 255
            + ++  +    S +  +V +A    +            +   V+L D  +++       
Sbjct: 44  DTANEDCYHASASYDGSRVVFACKYVDEATNLSSLPDTVNTWDVFLRDRTLNQTLALSAT 103

Query: 256 FR-----SMILAPRFSSNGKRALI-------SVQKDEAMDIYSVDL-------QSNATER 296
           ++        L P  S +G+           S   D  +DIY + +       QS    R
Sbjct: 104 YQNLLGQGNSLFPVISPDGQWVAFQTSAQLKSTDTDSRLDIYVLKVEADGTISQSIQASR 163

Query: 297 LTNTLFINIS-----ASYSPDSSQIVFESDREGKEQLYVMQSN------GSDQKRISQDK 345
            ++    +           P               +  ++Q +      G + + I Q  
Sbjct: 164 RSSGTPADADSGYTCPVPLPPGQTC--------DPKYLILQPSLAIYTEGGNPRVIFQSD 215

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVED-------SNLQAPTW 397
            ++    +         +           +   DGS   +LL           +   P  
Sbjct: 216 ASNLDLGLTDGNHKRDLYLSL--------INAADGSVTNKLLTRTPSGGSINGDAWHPVV 267

Query: 398 SPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLIN 432
           S  GR + F+        G +G ++Y +D +  N+ +++
Sbjct: 268 SYDGRWVAFTSDASNLIPGVSGIQVYLMDRDADNDGILD 306


>gi|302552584|ref|ZP_07304926.1| WD-40 repeat-containing protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302470202|gb|EFL33295.1| WD-40 repeat-containing protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 418

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 76/225 (33%), Gaps = 27/225 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  ++A A+ D    L          +    +      + A  FS +G+    +  
Sbjct: 5   AFSPDGSRLAAASADSTASLWKVGDPEHASQVGGPLAGSSGEMFALGFSPDGRTLA-TGA 63

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++S+         +T  + +     + PD   +   + R+ + +L+ ++ +G  
Sbjct: 64  GDNTVRLWSLPTSD-----MTGRIGV-----FRPDGRVLA-TAARDERVRLWDVRRSGRP 112

Query: 338 QK--RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED------ 389
                  +  +       +S  G  +A         A+ +   D  +  +          
Sbjct: 113 VPMGEPFRPGKGDVRSLAFSADGRTLAVVT---GGRAVQLWNLDDPKHPVRYGSPVALRF 169

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               A  +SP G+ L  +     D   +L+++  +      +  P
Sbjct: 170 RFADAVAFSPDGKVLATTYD---DRTIQLWNV-ADPSRPRRLGDP 210



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 59/385 (15%), Positives = 116/385 (30%), Gaps = 68/385 (17%)

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK-EGKDRLRV------EF 128
           S     +      + +         + W+   + +  TGR+       R+          
Sbjct: 44  SGEMFALGFSPDGRTLATGAGDNTVRLWSLPTSDM--TGRIGVFRPDGRVLATAARDERV 101

Query: 129 RLWDV--KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           RLWDV    R   +G+ F       R +A +                + R L V    V+
Sbjct: 102 RLWDVRRSGRPVPMGEPFRPGKGDVRSLAFSA---------------DGRTLAV----VT 142

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF------SPNQQKVAYATYDDEDILRVY 240
           G     L  +D    + ++       +    RF      SP+ + +A    D      + 
Sbjct: 143 GGRAVQLWNLD----DPKHPVRYGSPVALRFRFADAVAFSPDGKVLATTYDDR----TIQ 194

Query: 241 LMDTRIDRAPKRIGN----FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-- 294
           L +      P+R+G+     +  + +  FS +G+    S   D  + ++++     A   
Sbjct: 195 LWNVADPSRPRRLGDPLSGHKGYVNSLVFSQDGRTLA-SGSADGTVRLWNLADPGRAVLL 253

Query: 295 -ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              L   L    + +YSPD   +    D        +     +      +    +     
Sbjct: 254 GAPLKGHLGAVNALAYSPDGHTLASGGDDNSVRLWDITNPAKTSGIASLKGHTEAVVSLT 313

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLI 405
           ++  G  +A     G      V                  +P         +SP+ R L 
Sbjct: 314 FNRDGRTLASGGNDGTVRLWNVSDPA-----RATAIGQSMSPDAKSGGFLAFSPNSRLLG 368

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETL 430
            S    G    +L+ +D++     +
Sbjct: 369 VSS---GTDTIRLWDLDVDRAVARI 390



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 66/211 (31%), Gaps = 31/211 (14%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +F   FSP+ + +A    D+     V L          RIG          F 
Sbjct: 40  LAGSSGEMFALGFSPDGRTLATGAGDN----TVRLWSLPTSDMTGRIG---------VFR 86

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDRE 323
            +G+    +  +DE + ++ V          E          S ++S D   +       
Sbjct: 87  PDGRVLA-TAARDERVRLWDVRRSGRPVPMGEPFRPGKGDVRSLAFSADGRTLAVV---T 142

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           G   + +   +            A  F       +SP G ++A T +      +  +  D
Sbjct: 143 GGRAVQLWNLDDPKHPVRYGSPVALRFRFADAVAFSPDGKVLA-TTYDDRTIQLWNV-AD 200

Query: 380 GSQERLLVED-----SNLQAPTWSPSGRSLI 405
            S+ R L +        + +  +S  GR+L 
Sbjct: 201 PSRPRRLGDPLSGHKGYVNSLVFSQDGRTLA 231


>gi|213410599|ref|XP_002176069.1| transcriptional repressor tup11 [Schizosaccharomyces japonicus
           yFS275]
 gi|212004116|gb|EEB09776.1| transcriptional repressor tup11 [Schizosaccharomyces japonicus
           yFS275]
          Length = 314

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 77/214 (35%), Gaps = 17/214 (7%)

Query: 193 LCVMDRDGAN---IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           L  + RD  N    +      +  + +   S + +    A++D      + L D      
Sbjct: 42  LWNLTRDDVNYGVAQRRLTGHNHFVSDCSLSYDSRYALSASWDK----TIRLWDLEEGVC 97

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-- 307
             +     S +L+  FS + ++ ++S  +D+ + I+  ++  N    +T     +  +  
Sbjct: 98  THQFVGHTSDVLSVSFSPDNRQ-VVSGSRDKTIKIW--NIIGNCKYTITEGGHSDWVSCV 154

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SP+   + F S     + + V        +               SP G L A     
Sbjct: 155 RFSPNPDNVTFVS-AGWDKVVKVWDLESFALRTTHHGHTGYINAVTISPDGSLCA---SG 210

Query: 368 GEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPS 400
           G+   + +   + ++    L   +N+ A  +SP+
Sbjct: 211 GKDGVLMLWDLNENKHLYSLEAKTNINAVVFSPN 244



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 95/271 (35%), Gaps = 31/271 (11%)

Query: 160 DDIYQSITGEKGDFNSRIL------FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           DD+   +   +   ++  +      + S   +S     ++ + D +     +        
Sbjct: 48  DDVNYGVAQRRLTGHNHFVSDCSLSYDSRYALSASWDKTIRLWDLEEGVCTHQFVGHTSD 107

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +    FSP+ ++V   + D    ++++ +           G     +   RFS N     
Sbjct: 108 VLSVSFSPDNRQVVSGSRD--KTIKIWNIIGNCKYTITE-GGHSDWVSCVRFSPNPDNVT 164

Query: 274 ISVQK-DEAMDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYV 330
                 D+ + ++  DL+S A  R T+        + + SPD S         GK+ + +
Sbjct: 165 FVSAGWDKVVKVW--DLESFAL-RTTHHGHTGYINAVTISPDGSLCA----SGGKDGVLM 217

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-- 388
           +     ++   S + + +    V+SP    +     +G    I  ++     + L V+  
Sbjct: 218 LWDLNENKHLYSLEAKTNINAVVFSPNRYWL--CAATGSSIRIFDLESQEKVDELTVDFV 275

Query: 389 -------DSNLQAPTWSPSGRSLIFSRKKDG 412
                  +    +  WS  G++L FS   D 
Sbjct: 276 GVGKKSAEPECISLAWSADGQTL-FSGWTDN 305


>gi|218438319|ref|YP_002376648.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Cyanothece sp. PCC 7424]
 gi|218171047|gb|ACK69780.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Cyanothece sp. PCC 7424]
          Length = 643

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 15/134 (11%)

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-------EKFAI 373
           D+E +  +  +  N  + K +    +  Y  P  SP G  +A+  ++         + +I
Sbjct: 144 DQEPENSIVSVDLNNGEVKTLVSGCD-FYSSPRLSPDGLKLAWISWNHPNLPWDQSQISI 202

Query: 374 GVMKKDG--SQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +K DG     +L+   E+ ++  P WS  G  L F+  + G     LY     G  E 
Sbjct: 203 ASVKDDGTLGDPQLVAGEENESICEPKWSAEG-YLYFASDRSG--WWNLYRYSNTGVPEP 259

Query: 430 LINTPAYASDPQWV 443
           L    A  S P WV
Sbjct: 260 LYPMKAEFSYPHWV 273



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 62/177 (35%), Gaps = 24/177 (13%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-----EQLYVM 331
            ++    I SVDL +   + L +      S   SPD  ++ + S           Q+ + 
Sbjct: 144 DQEPENSIVSVDLNNGEVKTLVSGCDFYSSPRLSPDGLKLAWISWNHPNLPWDQSQISIA 203

Query: 332 QSNG----SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                    D + ++ ++  S  +P WS +G  + F       + +      G  E L  
Sbjct: 204 SVKDDGTLGDPQLVAGEENESICEPKWSAEG-YLYFASDRSGWWNLYRYSNTGVPEPLYP 262

Query: 388 EDSNLQAPTW----------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +    P W          S     L+ S  ++G     L +++L  +   LI+ P
Sbjct: 263 MKAEFSYPHWVFGLSTYTFSSQDN--LLCSYTQNGRW--YLANLNLTTQQFNLIDIP 315



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 78/224 (34%), Gaps = 27/224 (12%)

Query: 112 VTGRVIKEGKDRL-RVEFRLW-----DVKDRKQIIGKK-FFSSPASWRKIAHTISDDIYQ 164
           V  RV + G      V+ R++     D +  KQ+   +    +P S ++ A  I D  + 
Sbjct: 72  VRTRVHEYGGGSYLVVDGRIYFSNFADQQLYKQLPNSEPQRLTPESKQRYADIILDQRHN 131

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +           +   ++      +NS+  +D +   ++ L    D     PR SP+  
Sbjct: 132 RLI---------CVCEDQTNPDQEPENSIVSVDLNNGEVKTLVSGCD-FYSSPRLSPDGL 181

Query: 225 KVAYAT-------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISV 276
           K+A+ +       +D   I    + D      P+ +    +  +  P++S+ G     + 
Sbjct: 182 KLAWISWNHPNLPWDQSQISIASVKDDGTLGDPQLVAGEENESICEPKWSAEG-YLYFAS 240

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +    ++Y     +   E L           +    S   F S
Sbjct: 241 DRSGWWNLYRYS-NTGVPEPLYPMKAEFSYPHWVFGLSTYTFSS 283


>gi|19335618|gb|AAL85578.1| unknown protein [Aedes aegypti]
          Length = 335

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 63/181 (34%), Gaps = 10/181 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S   K SL  ++  G   + L P+  +      +SP+ + +A    D      + + D 
Sbjct: 150 GSHEGKISLYSVES-GKPEQVLDPANGKFTLSIAYSPDGKYIASGAIDG----IINIFDV 204

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  + +      + +  FS +  + L++   D  M +Y V   S+    L+      
Sbjct: 205 AAGKVAQTLEGHAMSVRSLCFSPD-SQMLLTASDDGHMKLYDV-AHSDVVGTLSGHSSWV 262

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S S+S D     F S    K  + +            +D +   +   +SP    +   
Sbjct: 263 LSVSFSGDGKS--FTSSSSDKT-VKIWNVAERQCLHTFEDHQDQVWGVKYSPDSSKVISV 319

Query: 365 K 365
            
Sbjct: 320 S 320



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 70/189 (37%), Gaps = 15/189 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           RV + D   +   K    F      +++   SS+G+    S   D  + I+  D      
Sbjct: 68  RVKVWDVTKENKLKLRNTFTGHSLGVVSVDVSSDGEVIA-SSSLDSGLCIWKAD-SGQLL 125

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +++       + ++SP    I+  S  EGK  LY ++ +G  ++ +            +
Sbjct: 126 NQISLGPVDLWTVAFSPCDKYIISGSH-EGKISLYSVE-SGKPEQVLDPANGKFTLSIAY 183

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDG 412
           SP G  IA     G    I +      +    +E   +   +  +SP  + L+ +     
Sbjct: 184 SPDGKYIASGAIDG---IINIFDVAAGKVAQTLEGHAMSVRSLCFSPDSQMLLTASD--- 237

Query: 413 DTGSKLYSI 421
           D   KLY +
Sbjct: 238 DGHMKLYDV 246


>gi|77164665|ref|YP_343190.1| peptidase S9, prolyl oligopeptidase active site region
           [Nitrosococcus oceani ATCC 19707]
 gi|254434130|ref|ZP_05047638.1| peptidase, S9A/B/C family, catalytic domain protein [Nitrosococcus
           oceani AFC27]
 gi|76882979|gb|ABA57660.1| Peptidase S9, prolyl oligopeptidase active site region
           [Nitrosococcus oceani ATCC 19707]
 gi|207090463|gb|EDZ67734.1| peptidase, S9A/B/C family, catalytic domain protein [Nitrosococcus
           oceani AFC27]
          Length = 643

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/256 (16%), Positives = 78/256 (30%), Gaps = 31/256 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIG--KKFFSSPASWRKIAHTISDDI--------Y 163
           G V +          R+ +      ++     FFS     R     I D I        Y
Sbjct: 60  GEVKEINPAPYNARTRVHEYGGGAYLVAGDSVFFSHFEDQRLYRCRIDDSIEPLTLEGDY 119

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +        F +R++ V E       +  N+L  +  DG     +  S       PR SP
Sbjct: 120 RYADAIFDRFRNRLVCVREDHTDKTREPVNTLVSIPLDGNKRISVLASGADFYASPRLSP 179

Query: 222 NQQKVAYATYDDE----DILRVYLMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +  ++A+ T++      D   ++L           +    G     I  P +S  G    
Sbjct: 180 DGSQLAWLTWNHPNMPWDGTDLWLAPVETAGSLGESKHIAGAADESIFQPEWSPTGT-LY 238

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--------DREGK 325
               +    ++Y    +    E +T          +    S   FES         R+G 
Sbjct: 239 FISDRTGWWNLYR--WREQQIESVTRMEVEFGVPQWVFGLSTYAFESAERIVCAYSRDGV 296

Query: 326 EQLYVMQSNGSDQKRI 341
             L ++ +     + +
Sbjct: 297 SHLAIIDAASGVLEEL 312



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 65/198 (32%), Gaps = 35/198 (17%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESD------ 321
           G     S  +D+ +    +D      E LT    +    A +    +++V   +      
Sbjct: 88  GDSVFFSHFEDQRLYRCRIDDS---IEPLTLEGDYRYADAIFDRFRNRLVCVREDHTDKT 144

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           RE    L  +  +G+ +  +       Y  P  SP G  +A+  ++        M  DG+
Sbjct: 145 REPVNTLVSIPLDGNKRISVLASGADFYASPRLSPDGSQLAWLTWNHPN-----MPWDGT 199

Query: 382 QERLL---VEDSNLQA-------------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              L       S  ++             P WSP+G  L F   + G      +      
Sbjct: 200 DLWLAPVETAGSLGESKHIAGAADESIFQPEWSPTGT-LYFISDRTGWWNLYRWR---EQ 255

Query: 426 RNETLINTPAYASDPQWV 443
           + E++         PQWV
Sbjct: 256 QIESVTRMEVEFGVPQWV 273


>gi|294634174|ref|ZP_06712726.1| tat pathway signal sequence domain-containing protein [Streptomyces
           sp. e14]
 gi|292829831|gb|EFF88188.1| tat pathway signal sequence domain-containing protein [Streptomyces
           sp. e14]
          Length = 916

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 21/170 (12%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D  +V   D  I     R+      I++   S +G     SV  D    +  VDL +   
Sbjct: 60  DKGQVVSADQYIAPYGDRLVIDDGKIMSSAVSPDGGHLAASVT-DGDASLVVVDLATGRI 118

Query: 295 ERLTNTLFINI-----------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS- 342
           ++   T   +              +YSPD  Q+ +    +G  + + +  +G+    ++ 
Sbjct: 119 KQRVGTNAADDLRISSNAVGQEGPTYSPDGKQL-WLGQLDGYTR-FTVTEDGTLADPVTV 176

Query: 343 -----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                  K+A     V+S  G  I +   +G+   + +    G+ E+   
Sbjct: 177 KIPADGAKQALAAAAVFSADGS-IVYAAVNGQNRVVAIDAATGAVEQSWT 225


>gi|312074097|ref|XP_003139817.1| chromatin assembly factor 1 subunit B [Loa loa]
 gi|307765018|gb|EFO24252.1| chromatin assembly factor 1 subunit B [Loa loa]
          Length = 521

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 63/198 (31%), Gaps = 52/198 (26%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT------------------ 294
           +   R+ +   RFS NG + L+S   D  + I+ +D+                       
Sbjct: 80  LVGHRTTVNVARFSPNG-QLLVSGDCDGCIIIWKIDIDGQKPILPRDDDFPSNVENWVRY 138

Query: 295 -ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--D 351
              L++   I  S  +SPDS +    S+    E   + +++    +R+   +    F   
Sbjct: 139 KTPLSHDSDI-CSLCWSPDSKRFAIVSN---DESFAMYEADTG--RRLWHMRSYRRFPNG 192

Query: 352 PVWSPQGDLIAFTKFS---------GEKFAIGVMK------------KDGSQERLLVEDS 390
             W P+G  IA                   I +                    +L  +D 
Sbjct: 193 VAWDPRGKYIATMSTDRKLDILCGKKGTRLICIQNVRLPKTILRKSNLTAGDYKLFHDDQ 252

Query: 391 NLQA---PTWSPSGRSLI 405
            +     P +SP G  LI
Sbjct: 253 LMSFSRIPDFSPDGELLI 270



 Score = 40.0 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 54/169 (31%), Gaps = 39/169 (23%)

Query: 312 DSSQIVFESDREGKEQLYVMQSN----GSDQKRISQ-----DKEASYFDPVWSPQGDLIA 362
           D  ++V  S R  + +++ M       G++   +           +     +SP G L+ 
Sbjct: 42  DFYKLVTCSLRR-EVRIWKMDFRMLPFGTEDLGVYFIANLVGHRTTVNVARFSPNGQLLV 100

Query: 363 FTKFSGEKFAIGVMKKDGSQERL-------------------LVEDSNLQAPTWSPSGRS 403
            +        I  +  DG +  L                   L  DS++ +  WSP  + 
Sbjct: 101 -SGDCDGCIIIWKIDIDGQKPILPRDDDFPSNVENWVRYKTPLSHDSDICSLCWSPDSKR 159

Query: 404 LIFSRK------KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                        + DTG +L+ +          N  A+    +++  M
Sbjct: 160 FAIVSNDESFAMYEADTGRRLWHMR---SYRRFPNGVAWDPRGKYIATM 205



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 46/226 (20%), Positives = 75/226 (33%), Gaps = 53/226 (23%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI-------------- 203
           I++ +    T     F+     +      G I   +  +D DG                 
Sbjct: 77  IANLVGHRTTVNVARFSPNGQLLVSGDCDGCII--IWKIDIDGQKPILPRDDDFPSNVEN 134

Query: 204 --RYLTP-SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             RY TP S D  +    +SP+ ++ A  + D+     +Y  DT      +R+ + RS  
Sbjct: 135 WVRYKTPLSHDSDICSLCWSPDSKRFAIVSNDES--FAMYEADTG-----RRLWHMRSYR 187

Query: 261 LAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             P    +   GK    ++  D  +DI    L      RL                  I 
Sbjct: 188 RFPNGVAWDPRGKYIA-TMSTDRKLDI----LCGKKGTRL------------------IC 224

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIA 362
            ++ R  K  L        D K    D+  S+   P +SP G+L+ 
Sbjct: 225 IQNVRLPKTILRKSNLTAGDYKLFHDDQLMSFSRIPDFSPDGELLI 270


>gi|297565802|ref|YP_003684774.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Meiothermus silvanus DSM 9946]
 gi|296850251|gb|ADH63266.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Meiothermus silvanus DSM 9946]
          Length = 620

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 99/318 (31%), Gaps = 63/318 (19%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
               ++ +   G      + I    +S  S   ++ L V + DG  +R LT    +    
Sbjct: 10  RFLSELTEGPGGRPLFVLTDIERTEKSEESPKYRSRLAVWE-DG--LRLLTQGEAR---T 63

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P+++    +  Y T   E + +++ +  R    P+++ +F++ +   + S +G +  +  
Sbjct: 64  PQWA---GEYIYFTRKVEKVAQLFRLPLR-GGEPEQVTHFKAGLEGYKVSPDGSKIALLS 119

Query: 277 QKD--------------------EAMDIYSVD-----LQSNATERLTNTLFINISASYSP 311
           + D                    +   +  V       Q   T  L          ++SP
Sbjct: 120 RGDYEAPKPDQPRTYQTWPFKFEQRGLLPQVPRALYLWQGGETRLLAQQPEDIEEVAWSP 179

Query: 312 DSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               +VF +          K++ Y +   G  ++               +P    + +  
Sbjct: 180 AGDFLVFTASATPQERWAWKQRCYRVNLAGQVEEL--FGGVGPISGLAVTPDAGGLVYLA 237

Query: 366 FS---GEKFAIGVMK-KDGSQERLLVED-------------SNLQAPTWSPSGRSLIFSR 408
            +   G      +     G     L E                 QAP + P G ++    
Sbjct: 238 HAWEFGGATEARLYHHPFGGGFTQLAEGAFGNTINSDCRYGGYFQAPRFGPDG-AIYLVE 296

Query: 409 KKDGDTGSKLYSIDLNGR 426
              G   ++L  + L G 
Sbjct: 297 TYKGS--ARLSRVSLAGE 312



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 64/193 (33%), Gaps = 39/193 (20%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +     P+++  G+    + + ++   ++ + L+    E++T+          SPD S+I
Sbjct: 58  QGEARTPQWA--GEYIYFTRKVEKVAQLFRLPLRGGEPEQVTHFKAGLEGYKVSPDGSKI 115

Query: 317 VFESDREG------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
              S  +       + + Y       +Q+ +                             
Sbjct: 116 ALLSRGDYEAPKPDQPRTYQTWPFKFEQRGLLPQVPR----------------------- 152

Query: 371 FAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKL----YSIDLNG 425
               +    G + RLL +   +++   WSP+G  L+F+               Y ++L G
Sbjct: 153 ---ALYLWQGGETRLLAQQPEDIEEVAWSPAGDFLVFTASATPQERWAWKQRCYRVNLAG 209

Query: 426 RNETLINTPAYAS 438
           + E L       S
Sbjct: 210 QVEELFGGVGPIS 222


>gi|242279920|ref|YP_002992049.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Desulfovibrio salexigens DSM 2638]
 gi|242122814|gb|ACS80510.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Desulfovibrio salexigens DSM 2638]
          Length = 642

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 66/176 (37%), Gaps = 17/176 (9%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G +        + ++I+  DL S+ T R+T+    +I   +   S +IVF  D  
Sbjct: 58  TISPDGNKIAWLAPWKDRLNIFVKDLSSDKTTRVTSATQRDIYGYFWAGSERIVFGQDSG 117

Query: 324 GKEQLYVMQS--NGSDQKRISQDKEASYF---DPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           G E ++   +  +GS +K ++  +        +        LI   K     F +  +  
Sbjct: 118 GDENVHTFSAAIDGSGEKDLTPFENTRTNLLDELEGDDDHILITINKDDPRLFDVYKLNI 177

Query: 379 DGSQERL------------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                +L               +  ++    S +G+++I  RK   D    + S+D
Sbjct: 178 VTGDLKLEARNPGDVSGWMTDHNGTVRLAVASRNGQNVILYRKNANDLFRPIMSMD 233



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 49/137 (35%), Gaps = 7/137 (5%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + SPD ++I + +  + +  ++V   +     R++   +   +   W+   + I F + S
Sbjct: 58  TISPDGNKIAWLAPWKDRLNIFVKDLSSDKTTRVTSATQRDIYGYFWA-GSERIVFGQDS 116

Query: 368 GEKFAIGVMKK--DGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G    +       DGS E+ L                    ++ +  KD      +Y ++
Sbjct: 117 GGDENVHTFSAAIDGSGEKDLTPFENTRTNLLDELEGDDDHILITINKDDPRLFDVYKLN 176

Query: 423 -LNGRNETLINTPAYAS 438
            + G  +     P   S
Sbjct: 177 IVTGDLKLEARNPGDVS 193



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 3/89 (3%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPS 400
             K         SP G+ IA+     ++  I V      +   +      ++    W+ S
Sbjct: 48  FFKNPEAAGFTISPDGNKIAWLAPWKDRLNIFVKDLSSDKTTRVTSATQRDIYGYFWAGS 107

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            R ++F +   GD     +S  ++G  E 
Sbjct: 108 ER-IVFGQDSGGDENVHTFSAAIDGSGEK 135


>gi|293337075|ref|NP_001170637.1| hypothetical protein LOC100384689 [Zea mays]
 gi|238006528|gb|ACR34299.1| unknown [Zea mays]
          Length = 375

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 79/229 (34%), Gaps = 37/229 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+Q  +A+   + E  + +Y   T        +     ++    +S++  + + +V 
Sbjct: 17  AWSPDQSMIAFCPNNHE--VHIYKFFTDKWEKLHVLSKHDQIVSGIDWSNSSNKIV-TVS 73

Query: 278 KDEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D    +++ +        +    N   + +   +SP  ++    S   G + + +    
Sbjct: 74  HDRNSYVWTQEGSDWIPTLVILKLNRAALCVQ--WSPKENKFAVGS---GAKSVCICYYE 128

Query: 335 GSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVE 388
             +     K I +  E+S     W P    +A T   G    F+  +   D    +    
Sbjct: 129 QENNWWISKVIRKRHESSVTSLAWHPNNIYLATTSTDGKCRVFSTFIKGVDTRGSQSSTS 188

Query: 389 D---------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                           + +    WSPSG++L ++        S +Y ID
Sbjct: 189 TNSKFGEQIAQLDLSSTWVFGVRWSPSGKTLAYA-----GHNSMVYVID 232



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 58/198 (29%), Gaps = 19/198 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +     D     ++    DQI+    +S +  K+   ++D      V+  +         
Sbjct: 36  IYKFFTDKWEKLHVLSKHDQIVSGIDWSNSSNKIVTVSHDRNS--YVWTQEGSDWIPTLV 93

Query: 253 IGNFRSMILAPRFSSN---------GKRALISVQKDEAMDIYSVDLQSNATERLTN---T 300
           I       L  ++S            K   I   + E     S  ++      +T+    
Sbjct: 94  ILKLNRAALCVQWSPKENKFAVGSGAKSVCICYYEQENNWWISKVIRKRHESSVTSLAWH 153

Query: 301 LFINISASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                 A+ S D    VF +     D  G +      S   +Q           F   WS
Sbjct: 154 PNNIYLATTSTDGKCRVFSTFIKGVDTRGSQSSTSTNSKFGEQIAQLDLSSTWVFGVRWS 213

Query: 356 PQGDLIAFTKFSGEKFAI 373
           P G  +A+   +   + I
Sbjct: 214 PSGKTLAYAGHNSMVYVI 231


>gi|168037590|ref|XP_001771286.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677375|gb|EDQ63846.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 559

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 80/203 (39%), Gaps = 13/203 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    D  ++  +FS + + +A ++ D   I+   + D  +    K  G+ + +     
Sbjct: 223 QVLEMHDDEVWFLQFSHDGRYLASSSKDCTAIIWEVVEDDSLRVKFKLTGHSKPVSF-VA 281

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDR 322
           +S +    L++   +E + ++  D  +    + T     +   S ++ PD  +  F S  
Sbjct: 282 WSPD-DTMLLTCGNEEVVKLW--DTATG-LCKYTYDKPNSCFTSCAWFPDGQR--FVSG- 334

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G + +Y+    G + +     +     D   +  G  +       +   I +   +   
Sbjct: 335 GGDKCIYMWDLEGHELEAWKGARMPRINDLAITTDGSHMVSIC---DHKNIRIYNLEEKT 391

Query: 383 ERLLVEDSNLQAPTWSPSGRSLI 405
           ER++ E+  + + + S +GR L+
Sbjct: 392 ERVIEEEKPITSLSVSKNGRYLL 414



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 58/196 (29%), Gaps = 26/196 (13%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V++ D   +++      + +    +SP+   +        +   V L DT          
Sbjct: 258 VVEDDSLRVKFKLTGHSKPVSFVAWSPDDTMLLTC----GNEEVVKLWDTATGLCKYTYD 313

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-------NATERLTNTLFINISA 307
              S   +  +  +G+R +          IY  DL+         A     N L I    
Sbjct: 314 KPNSCFTSCAWFPDGQRFV---SGGGDKCIYMWDLEGHELEAWKGARMPRINDLAITT-- 368

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
               D S +V   D    + + +       ++ I ++K  +      S  G  +      
Sbjct: 369 ----DGSHMVSICD---HKNIRIYNLEEKTERVIEEEKPITSL--SVSKNGRYLL-VNLV 418

Query: 368 GEKFAIGVMKKDGSQE 383
            ++  +  +       
Sbjct: 419 SQEIHLWDISAATRDL 434


>gi|124003362|ref|ZP_01688212.1| peptidase, S9A/B/C families, catalytic domain protein [Microscilla
           marina ATCC 23134]
 gi|123991460|gb|EAY30891.1| peptidase, S9A/B/C families, catalytic domain protein [Microscilla
           marina ATCC 23134]
          Length = 904

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/243 (18%), Positives = 81/243 (33%), Gaps = 62/243 (25%)

Query: 264 RFSSNGKRALISVQK-DEAMDIYSVDL----------QSN-ATERLTNTLFINISASYSP 311
           RFS NGK  + + ++ D+  D +  DL          +    T RLT +   + S  +S 
Sbjct: 39  RFSPNGKMVVWAKRRPDKKKDRFISDLYLTRLDMTNKKGRYKTIRLTRSKDSDYSPVFSA 98

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--------------------ASYFD 351
           DS  I F S R   + L+ M + G    ++   K                     ASY++
Sbjct: 99  DSETIYFLSSRAKGKALWAMSTYGGAPYKVHTFKNSISNIHLRNQHTLFFVSSEGASYYE 158

Query: 352 PVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSG------- 401
                + D +   + +   +   +        Q ER         +   S +G       
Sbjct: 159 QQLKKEKDNVVVVEDTEHMKATRVFSFNLKTKQIERQTDNRYPTMSLAVSKNGQWMVTAH 218

Query: 402 -RSLIFSRKKDGDTGSKLYSIDLNGRNETLINT---PAY----------------ASDPQ 441
            RSL ++          ++++    +   L +T   P                  +SDP+
Sbjct: 219 LRSLHYASDGKPRPAYYIWNLKTGTKTAVLKDTYQGPGNFEFSEDNQGFYFTSTKSSDPE 278

Query: 442 WVG 444
           W G
Sbjct: 279 WGG 281



 Score = 46.2 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/244 (12%), Positives = 71/244 (29%), Gaps = 52/244 (21%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDR----------APKRIGNFRSMILAPRFSS 267
           RFSPN + V +A    +     ++ D  + R             R+   +    +P FS+
Sbjct: 39  RFSPNGKMVVWAKRRPDKKKDRFISDLYLTRLDMTNKKGRYKTIRLTRSKDSDYSPVFSA 98

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE- 326
           + +       + +   ++++     A  ++ +T   +IS  +  +   + F S       
Sbjct: 99  DSETIYFLSSRAKGKALWAMSTYGGAPYKV-HTFKNSISNIHLRNQHTLFFVSSEGASYY 157

Query: 327 -----------------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                                  +++         +R + D          S  G  +  
Sbjct: 158 EQQLKKEKDNVVVVEDTEHMKATRVFSFNLKTKQIERQT-DNRYPTMSLAVSKNGQWMVT 216

Query: 364 TKFSGEKF--------AIGVMKKDGSQERLLVED-----SNLQAPTWSPSGRSLIFSRKK 410
                  +        A  +       +  +++D      N +   +S   +   F+  K
Sbjct: 217 AHLRSLHYASDGKPRPAYYIWNLKTGTKTAVLKDTYQGPGNFE---FSEDNQGFYFTSTK 273

Query: 411 DGDT 414
             D 
Sbjct: 274 SSDP 277



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 70/218 (32%), Gaps = 42/218 (19%)

Query: 186 SGIIKNSLCVMDRDGANIR------YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                + L +   D  N +       LT S+D   + P FS + + + + +   +   + 
Sbjct: 58  KDRFISDLYLTRLDMTNKKGRYKTIRLTRSKDS-DYSPVFSADSETIYFLSSRAKG--KA 114

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-------------------- 279
               +    AP ++  F++ I       N         +                     
Sbjct: 115 LWAMSTYGGAPYKVHTFKNSISNIHLR-NQHTLFFVSSEGASYYEQQLKKEKDNVVVVED 173

Query: 280 ----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------FESDREGKEQ 327
               +A  ++S +L++   ER T+  +  +S + S +   +V        + SD + +  
Sbjct: 174 TEHMKATRVFSFNLKTKQIERQTDNRYPTMSLAVSKNGQWMVTAHLRSLHYASDGKPRPA 233

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            Y+       +  + +D      +  +S       FT 
Sbjct: 234 YYIWNLKTGTKTAVLKDTYQGPGNFEFSEDNQGFYFTS 271


>gi|294629281|ref|ZP_06707841.1| LOW QUALITY PROTEIN: tricorn protease [Streptomyces sp. e14]
 gi|292832614|gb|EFF90963.1| LOW QUALITY PROTEIN: tricorn protease [Streptomyces sp. e14]
          Length = 1022

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 60/188 (31%), Gaps = 14/188 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSN-----ATERLTNTL-FINISASYSPDSSQIV 317
            F ++G++ ++ V   E  D       +         RL        +  + +PD S+  
Sbjct: 288 TFRADGEQWVVWVTDAEGDDALEFAPATGVAPGATPRRLAAGRLGRVLELAMAPDGSRAA 347

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVM 376
             S      +L +++    + + + +         V+SP    +A++         + + 
Sbjct: 348 VASH---DGRLLLVERESGEVREVDRSDNGDVSGLVFSPDSGWLAWSHPGPRPLSQLRLA 404

Query: 377 KK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLIN 432
              D S            AP ++  G+ L F   +  D     +  DL         LI 
Sbjct: 405 NTTDLSVTEATPLRFQDYAPAFTLDGKHLAFLSHRSFDPVYDEHVFDLAFVESSRPYLIT 464

Query: 433 TPAYASDP 440
             A    P
Sbjct: 465 LAATTPSP 472



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 44/125 (35%), Gaps = 5/125 (4%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           GA  R L   R   + E   +P+  + A A++D     R+ L++       +   +    
Sbjct: 320 GATPRRLAAGRLGRVLELAMAPDGSRAAVASHDG----RLLLVERESGEVREVDRSDNGD 375

Query: 260 ILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +    FS +      S      +  +   +    +    T   F + + +++ D   + F
Sbjct: 376 VSGLVFSPDSGWLAWSHPGPRPLSQLRLANTTDLSVTEATPLRFQDYAPAFTLDGKHLAF 435

Query: 319 ESDRE 323
            S R 
Sbjct: 436 LSHRS 440


>gi|282890392|ref|ZP_06298920.1| hypothetical protein pah_c016o131 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499774|gb|EFB42065.1| hypothetical protein pah_c016o131 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 763

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 29/137 (21%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQK---DEAMD-----------------IYSVDL 289
           PK IG+   +        NG+  + +V +   +   D                 +Y  +L
Sbjct: 35  PKEIGSHEKI----AVHPNGQSIIYTVHQKPLEGFPDDAYIMPTGVPFNRLHSYLYIYEL 90

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-----ISQD 344
           +S  T ++           +SPD  +I F  D+EG   L++     +         I  +
Sbjct: 91  ESGKTTQIGPKDANCWRPCFSPDGQKIAFYCDKEGFSNLWIHDIASAQSSLACKNAIRTN 150

Query: 345 KEASYFDPVWSPQGDLI 361
                  P WSP   L+
Sbjct: 151 LCGLVDRPYWSPDSSLV 167



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 41/122 (33%), Gaps = 26/122 (21%)

Query: 218 RFSPNQQKVAYATYD---DEDILRVYLMDTRI---------------DRAPKRIGNFRSM 259
              PN Q + Y  +    +      Y+M T +                    +IG   + 
Sbjct: 45  AVHPNGQSIIYTVHQKPLEGFPDDAYIMPTGVPFNRLHSYLYIYELESGKTTQIGPKDAN 104

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-------NATERLTNTLFINISASYSPD 312
              P FS +G++      K+   +++  D+ S           R TN   +     +SPD
Sbjct: 105 CWRPCFSPDGQKIAFYCDKEGFSNLWIHDIASAQSSLACKNAIR-TNLCGLVDRPYWSPD 163

Query: 313 SS 314
           SS
Sbjct: 164 SS 165



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 28/133 (21%)

Query: 340 RISQDKE--ASYFDPVWSPQGDLI---------------AFTKFSGEKFA-----IGVMK 377
           +I+   +   S+      P G  I               A+   +G  F      + + +
Sbjct: 30  QITFLPKEIGSHEKIAVHPNGQSIIYTVHQKPLEGFPDDAYIMPTGVPFNRLHSYLYIYE 89

Query: 378 KDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-----DLNGRNETLI 431
            +  +   +  +D+N   P +SP G+ + F   K+G +   ++ I      L  +N    
Sbjct: 90  LESGKTTQIGPKDANCWRPCFSPDGQKIAFYCDKEGFSNLWIHDIASAQSSLACKNAIRT 149

Query: 432 NTPAYASDPQWVG 444
           N       P W  
Sbjct: 150 NLCGLVDRPYWSP 162



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 8/85 (9%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           LY+ +       +I   K+A+ + P +SP G  IAF         + +     +Q  L  
Sbjct: 85  LYIYELESGKTTQI-GPKDANCWRPCFSPDGQKIAFYCDKEGFSNLWIHDIASAQSSLAC 143

Query: 388 ED-------SNLQAPTWSPSGRSLI 405
           ++         +  P WSP    + 
Sbjct: 144 KNAIRTNLCGLVDRPYWSPDSSLVY 168


>gi|114647205|ref|XP_001156920.1| PREDICTED: WD repeat and SOCS box-containing protein 2 isoform 3
           [Pan troglodytes]
          Length = 421

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 83/216 (38%), Gaps = 23/216 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D+
Sbjct: 136 PDVSCLVLATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDK 193

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 194 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 250

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----------- 389
             +  ++S     +SP   L+    +      I      G + R L              
Sbjct: 251 KLEGHQSSVVSCDFSPDSALLVTASYDTN--VIMWDPYTGERLRSLHHTQVDPAMDDSDV 308

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S+L++  +SP G   ++      D   ++++++L
Sbjct: 309 HISSLRSVCFSPEG---LYLATVADDRLLRIWALEL 341



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 84/276 (30%), Gaps = 41/276 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT- 230
           D  SR L  + +  +  ++  L + +                 +   FSP+    A++  
Sbjct: 4   DRESRFLRGTGTGEAVAVEEPLLLAELKPGRPHQFDWKSSCETWSVAFSPDGSWFAWSQG 63

Query: 231 -----------------YDDEDILRVYLMDTRIDRAPKRIGN-----FRSMILAPRFSSN 268
                               E   R    +T+   +PK            +  +P  S  
Sbjct: 64  HCIVKLIPWPLEEQFIPKGFEAKSRSSKNETKGRGSPKEKTLDCGQIVWGLAFSPWPSPP 123

Query: 269 GKRA---------------LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            ++                L +   D  + I+ V         L+    +    S++P  
Sbjct: 124 SRKLWARHHPQVPDVSCLVLATGLNDGQIKIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSG 182

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           S I+  + R+   +++ +  +G   + +S       +    SP   ++         F +
Sbjct: 183 SLILVSASRDKTLRIWDLNKHGKQIQVLS-GHLQWVYCCSISPDCSMLCSAAGEKSVF-L 240

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             M+      +L    S++ +  +SP    L+ +  
Sbjct: 241 WSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASY 276


>gi|297693139|ref|XP_002823881.1| PREDICTED: WD repeat and SOCS box-containing protein 2-like isoform
           2 [Pongo abelii]
          Length = 421

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 83/216 (38%), Gaps = 23/216 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D+
Sbjct: 136 PDVSCLVLATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDK 193

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 194 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 250

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----------- 389
             +  ++S     +SP   L+    +      I      G + R L              
Sbjct: 251 KLEGHQSSVVSCDFSPDSALLVTASYDTN--VIMWDPYTGERLRSLHHTQVDPAMDDSDV 308

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S+L++  +SP G   ++      D   ++++++L
Sbjct: 309 HISSLRSVCFSPEG---LYLATVADDRLLRIWALEL 341



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 86/276 (31%), Gaps = 41/276 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT- 230
           D  SR L  + +  +  ++  L + +                 +   FSP+    A++  
Sbjct: 4   DRESRFLRGTGTGEAVAVEEPLLLAELKPGRPHQFDWKSSCETWSVAFSPDGSWFAWSQG 63

Query: 231 ----------YDDEDILRVYLMDTRIDRAPKRIGNFR------------SMILAPRFSSN 268
                      +++ I + +   +R  +   +                  +  +P  S  
Sbjct: 64  HCIVKLIPWPLEEQFIPKGFEAKSRSGKNETKGRGSPKEKTLDCGQIVWGLAFSPWPSPP 123

Query: 269 GKRA---------------LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            ++                L +   D  + I+ V         L+    +    S++P  
Sbjct: 124 SRKLWARHHPQVPDVSCLVLATGLNDGQIKIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSG 182

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           S I+  + R+   +++ +  +G   + +S       +    SP   ++         F +
Sbjct: 183 SLILVSASRDKTLRIWDLNKHGKQIQVLS-GHLQWVYCCSISPDCSMLCSAAGEKSVF-L 240

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             M+      +L    S++ +  +SP    L+ +  
Sbjct: 241 WSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASY 276


>gi|298241162|ref|ZP_06964969.1| 40-residue YVTN family beta-propeller repeat protein [Ktedonobacter
           racemifer DSM 44963]
 gi|297554216|gb|EFH88080.1| 40-residue YVTN family beta-propeller repeat protein [Ktedonobacter
           racemifer DSM 44963]
          Length = 502

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 75/199 (37%), Gaps = 9/199 (4%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ ++V + T   E+ + V    +  ++    + N   M +   FS +GK   +      
Sbjct: 147 PDGKEV-WVTVRGENYVSVLDGTSYQEKMRITVPNGPGMTI---FSPDGKYGYVCSSFTP 202

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D+ +V        R+T       + + +PD  Q+ F     GK +++      S  K 
Sbjct: 203 ETDVITV-ADHKIVGRVTQASPFCPNIAATPDGKQVWFTLKDTGKTEVFDAHPPFSILKT 261

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SP 399
           +      ++ + V +  G   A+    G    + V + D   +   +    L    W S 
Sbjct: 262 LDTGPITNHINIVHNAHGTF-AYITI-GGLNEVKVFRTDNFAQVATILVGALPHGIWPSG 319

Query: 400 SGRSLIFSRKKDGDTGSKL 418
            G  + ++  ++GD+   +
Sbjct: 320 DGTRI-YTGLENGDSLVAI 337



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 77/208 (37%), Gaps = 12/208 (5%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            RD++    ++S     V      D  +L V  +          + + + ++    FS +
Sbjct: 50  HRDRVYTADQWS---NTVTVTDPVDNKLLGVIRLGETTPANLSPLYSGQVLVHGMGFSPD 106

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +  L+      +  +  +D  +NA + +T        A Y+PD  + V+ + R G+  +
Sbjct: 107 HRTLLVVSI--GSNSVAFIDTATNAVKHITYVGRSPHEAFYTPDGKE-VWVTVR-GENYV 162

Query: 329 YVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLL 386
            V+      +K RI+          ++SP G      + F+ E   I V        R+ 
Sbjct: 163 SVLDGTSYQEKMRITVPNGPGMT--IFSPDGKYGYVCSSFTPETDVITVADHKIVG-RVT 219

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                      +P G+ + F+ K  G T
Sbjct: 220 QASPFCPNIAATPDGKQVWFTLKDTGKT 247


>gi|294777488|ref|ZP_06742939.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           vulgatus PC510]
 gi|294448556|gb|EFG17105.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           vulgatus PC510]
          Length = 747

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/297 (12%), Positives = 92/297 (30%), Gaps = 64/297 (21%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-----IGNF 256
             ++     D+    P  SP+ + +A+          +Y+ +    +  +      +GN+
Sbjct: 150 RQKHWMEVDDEKTASPVPSPDGKWIAFI-----KNQNIYVKEVATGKEKQLSLDGTLGNY 204

Query: 257 RSMILAPRFSSNGKRAL------------ISVQKDEAMDI-------------------- 284
            S  +  R+S + K+                V+   A  +                    
Sbjct: 205 YSAYI--RWSPDSKKVASCKIRPVEKRYVYYVESSPADQLQPKLHKQEYAKPGDELPFKV 262

Query: 285 -YSVDLQSNAT----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSD 337
               +++S  +      L +  +      ++PDS  + FE ++ G +   V  + +    
Sbjct: 263 PCIYEVESGRSIIPSTELFDRQYEVYGPEWNPDSRAVTFEYNQRGHQVYRVLELSAETGK 322

Query: 338 QKRI---SQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSN 391
            + +   + D   +Y          G  + +         + +  +  +Q    + +   
Sbjct: 323 VRPLVEETSDTYVNYTRHFRHDLKDGKQMIWMSERDNWNHLYMYNRITAQPDYQITKGEW 382

Query: 392 L--QAPTWSPSGRSLIFSRK--KDGDTGSKL--YSIDLNGRNETLINTPAYASDPQW 442
              +        R + FS    + G+    +  Y I  +G+  T + TP       W
Sbjct: 383 YVREVLRVDEDNRQIYFSANGMEAGEDPYLIRYYRIGFDGKGLTCL-TPEEGMHRAW 438



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 52/164 (31%), Gaps = 35/164 (21%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--------SYSP--DSSQI 316
            +G R  +SV  D+       D      + L       +          S S   D+ + 
Sbjct: 66  PDG-RLYVSVDADKKARKELFD-SHRLAKALGAASGKEVKPEALALGHLSVSKGLDTLRF 123

Query: 317 VFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFD------PVWSPQGDLIAFTKF 366
           VF + R      K QL     N      + + K     D      PV SP G  IAF K 
Sbjct: 124 VFNNQRWMYASRKNQL----VNEGAVPLLIRQKHWMEVDDEKTASPVPSPDGKWIAFIKN 179

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAP-----TWSPSGRSLI 405
                 I V +    +E+ L  D  L         WSP  + + 
Sbjct: 180 Q----NIYVKEVATGKEKQLSLDGTLGNYYSAYIRWSPDSKKVA 219



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 67/194 (34%), Gaps = 18/194 (9%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRF 265
            R   ++ P ++P+ + V +        +   L  +      + +    +   +     F
Sbjct: 282 DRQYEVYGPEWNPDSRAVTFEYNQRGHQVYRVLELSAETGKVRPLVEETSDTYVNYTRHF 341

Query: 266 S---SNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINIS-ASYSPDSSQIVFES 320
                +GK+ +   ++D    +Y  +  +     ++T   +          D+ QI F +
Sbjct: 342 RHDLKDGKQMIWMSERDNWNHLYMYNRITAQPDYQITKGEWYVREVLRVDEDNRQIYFSA 401

Query: 321 D--REGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +    G++    + Y +  +G     ++ ++        +S     +       +K  + 
Sbjct: 402 NGMEAGEDPYLIRYYRIGFDGKGLTCLTPEEGMHRAW--FSGDMKYLVDVYSMVDKVPVA 459

Query: 375 VMK--KDGSQERLL 386
           V++  +DG     L
Sbjct: 460 VLRSARDGKVVMPL 473


>gi|257093020|ref|YP_003166661.1| peptidase C14 caspase catalytic subunit p20 [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257045544|gb|ACV34732.1| peptidase C14 caspase catalytic subunit p20 [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 991

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 51/172 (29%), Gaps = 10/172 (5%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            P         + A   + +G     +                    R+T    +    S
Sbjct: 87  RPPSGAGNDGKLYAVAMAPDGALVAAAGWSASNDLYLVRRHDGQIIHRITALPDVVTHLS 146

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKF 366
           +SPD   +V         ++++     +  + +  D + S       WSP G  +  +  
Sbjct: 147 FSPDGRTLVVGLWGRQGVRVFLGAEGWTGARELQGDADYSNEVNATAWSPDGKNVVVSSA 206

Query: 367 SGEKFAIGVMKKDGSQERLL--VEDSNLQAP---TWSPSGRSLIFSRKKDGD 413
            G    +   +      +LL     +    P    +SP G+++       G+
Sbjct: 207 DG---FVRAYEVTAKGLKLLSRSTPAGTGIPFGLAFSPDGQTVAVGASDQGN 255



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 87/281 (30%), Gaps = 32/281 (11%)

Query: 153 KIAHTI---SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           +I H I    D +        G    R L V      G ++  L      GA        
Sbjct: 130 QIIHRITALPDVVTHLSFSPDG----RTLVVGLWGRQG-VRVFLGAEGWTGARELQGDAD 184

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-FRSMILAPRFSSN 268
               +    +SP+ + V  ++ D    +R Y +  +  +   R       +     FS +
Sbjct: 185 YSNEVNATAWSPDGKNVVVSSAD--GFVRAYEVTAKGLKLLSRSTPAGTGIPFGLAFSPD 242

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISA----SYSPDSSQIVFESDR- 322
           G+   +         I  +D ++  T + L++T      +    ++S D  ++       
Sbjct: 243 GQTVAVGASDQGN--IVLLDAKTLKTRKVLSSTKGSLARSLSVVAWSADGKRLYAAGSWV 300

Query: 323 --EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI------AFTKFSGEKFAIG 374
             +G+  +      G  +  +      +      +  G L+      A+   +     + 
Sbjct: 301 TDKGQFAILAWPDTGQGEPAVLPVARNTITALHATRDGSLLYATADPAWGVLAANGQPLF 360

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +       R L     L     +  G +L F   + G +G
Sbjct: 361 AVGNSLLDFRNLRSRFRL-----AADGGALAFQETRPGSSG 396


>gi|196229109|ref|ZP_03127974.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
 gi|196226341|gb|EDY20846.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
          Length = 1038

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 77/232 (33%), Gaps = 18/232 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++    + A A+ D    + ++ M     R  + +      ++   FS + K   +   +
Sbjct: 372 WAYTGMRGATASSD--GHVSLWTMHNGARRGERLLHGGPVNVI--TFSPDLKTIAV-GTE 426

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSD 337
           D    ++  D        + +      SA YS D   ++  S D    + +         
Sbjct: 427 DGEARLWRTD-GGMPLTTVRDHNARARSAFYSADGQHLITTSEDHTALQWISGHVDPFGP 485

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             R            V++    LIA    +G  + +       ++ R     S +    +
Sbjct: 486 AMR----HAGKVNCGVFNADASLIATGDSTGAAW-LWRASNGQAEGRAFRHASAVNWVDF 540

Query: 398 SPSGRSLIFSRKKDG------DTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           +P G  L+ +   +       D    L  +   G+ ++ I    ++ D +W+
Sbjct: 541 APDGTRLLTASGPNATIWSLRDRAKALAVLHSPGKKKSEIRCARFSPDGKWI 592



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 89/269 (33%), Gaps = 29/269 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  +  S     SL  M         L       +    FSP+ + +A  T D E     
Sbjct: 377 MRGATASSDGHVSLWTMHNGARRGERLLHGGPVNVI--TFSPDLKTIAVGTEDGE----A 430

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERL 297
            L  T        + +  +   +  +S++G+  + + +   A+   S  VD    A    
Sbjct: 431 RLWRTDGGMPLTTVRDHNARARSAFYSADGQHLITTSEDHTALQWISGHVDPFGPAMR-- 488

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                      ++ D+S I    D  G    ++ +++    +  +    ++     ++P 
Sbjct: 489 --HAGKVNCGVFNADASLIA-TGDSTGAA--WLWRASNGQAEGRAFRHASAVNWVDFAPD 543

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGD 413
           G  +      G    I  ++       +L      ++      +SP G+ ++ +     D
Sbjct: 544 GTRLLTAS--GPNATIWSLRDRAKALAVLHSPGKKKSEIRCARFSPDGKWIVTAS---AD 598

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQW 442
             ++++    +G     + +     DP W
Sbjct: 599 GTARIW----DGATYQSVAS-IDRHDPLW 622



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 65/201 (32%), Gaps = 25/201 (12%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G FN+    ++    +G     L     +G            + +   F+P+  ++  A+
Sbjct: 496 GVFNADASLIATGDSTGAAW--LWRA-SNGQAEGRAFRHASAVNWV-DFAPDGTRLLTAS 551

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             +  I  +     +        G  +S I   RFS +GK  + +   D    I+     
Sbjct: 552 GPNATIWSL-RDRAKALAVLHSPGKKKSEIRCARFSPDGKWIV-TASADGTARIW----- 604

Query: 291 SNATERLTNTLFINIS-----ASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRISQ 343
             AT +  +   I+       A +SPDSS +V   D  R    +    +  G+       
Sbjct: 605 DGATYQ--SVASIDRHDPLWCARFSPDSSLLVVTGDDARAIVYETRTWKQVGTPV----- 657

Query: 344 DKEASYFDPVWSPQGDLIAFT 364
                    V +     +A  
Sbjct: 658 LGPGPIISAVITNDNRFLAVA 678


>gi|195499660|ref|XP_002097044.1| GE26002 [Drosophila yakuba]
 gi|194183145|gb|EDW96756.1| GE26002 [Drosophila yakuba]
          Length = 332

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 83/201 (41%), Gaps = 15/201 (7%)

Query: 225 KVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           K    T   +D+++V+ L +    +   ++      +++   SS+G+    S   D  M 
Sbjct: 53  KDFIVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIA-SSSLDSTMC 111

Query: 284 IYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++  D +S   + L T       +  +SP +  ++     +GK  +Y +++  ++Q   +
Sbjct: 112 LW--DARSGDKKHLLTFGPVDLWTVQFSPCNKYVI-SGLNDGKISMYSVETGKAEQTLDA 168

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPS 400
           Q+ + +     +SP G  IA     G    I +      +    +E   +   +  +SP+
Sbjct: 169 QNGKYTL-SIAYSPDGKYIASGAIDG---IITIFDVAAGKVVQTLEGHAMPVRSLCFSPN 224

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
            + L+ +     D   KLY +
Sbjct: 225 SQMLLTASD---DGHMKLYDV 242



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 65/185 (35%), Gaps = 20/185 (10%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   + L     +      +SP+ + +A    D      + + D    +  + +      
Sbjct: 160 GKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDG----IITIFDVAAGKVVQTLEGHAMP 215

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQI 316
           + +  FS N  + L++   D  M +Y V   D+       L+      +  S+S D    
Sbjct: 216 VRSLCFSPN-SQMLLTASDDGHMKLYDVTHSDVVGT----LSGHASWVLCVSFSEDGKHF 270

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIG 374
              S  +   +++    + S++K +    E +   +   +SP  D +A +    +   I 
Sbjct: 271 A-SSSSDNSVKIW----DTSERKCLHTFAEHTDQVWGVRYSPGNDKVA-SASEDKSLNIY 324

Query: 375 VMKKD 379
               +
Sbjct: 325 YCPPN 329


>gi|146298399|ref|YP_001192990.1| peptidase S9 prolyl oligopeptidase [Flavobacterium johnsoniae
           UW101]
 gi|146152817|gb|ABQ03671.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Flavobacterium johnsoniae UW101]
          Length = 633

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 58/165 (35%), Gaps = 19/165 (11%)

Query: 219 FSPNQQKVAYA-------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +SP+ + + Y         Y       +Y  +    +   +         AP+FS  G  
Sbjct: 177 WSPDSKSIFYVCKKKAGTAYAISTNTDIYEYNLETQKTTNKTDGNLGYDTAPQFSPTGNL 236

Query: 272 ALISVQKDEA---MDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQ 327
           + + +++D      +   V+ +      LT N      +  +S D   + F +  +G +Q
Sbjct: 237 SWLQMKRDGYESDKNDIIVEFK-GIKTNLTANWDGTVDNFIWSKDGKTVFFVAPIDGTKQ 295

Query: 328 LYVMQSNGS-----DQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           L+ +   G        ++++           +S  GD I  T+  
Sbjct: 296 LFSVNFPGLTKIAIQVRQLTNGDFDVNDLVGFS--GDDIIVTRTD 338



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/267 (16%), Positives = 93/267 (34%), Gaps = 22/267 (8%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           + SV      +    +  +G N   +  ++D IL +   SP+ + V Y      D +   
Sbjct: 51  TPSVEENKSHSKFYTIPVNGGNATEIKDTKD-ILADKNISPDGKYVVYNEEVKIDKVLGK 109

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGK--RALISVQKDEAMDIYSVDLQSNATERLT 298
               ++D++  +I +         ++  GK         KD A  I  +  ++  + +  
Sbjct: 110 DFYPKLDKSDAQIYDGLDYRHWDTWN-EGKFNHVFYKENKDGAKGIDILKGENFDSPQKP 168

Query: 299 NTLFINISASYSPDSSQIVFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                +    +SPDS  I +                 +Y            +        
Sbjct: 169 FGGDEDY--IWSPDSKSIFYVCKKKAGTAYAISTNTDIYEYNLETQKTTNKTDGNLGYDT 226

Query: 351 DPVWSPQGD--LIAFTK--FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
            P +SP G+   +   +  +  +K  I +++  G +  L    D  +    WS  G+++ 
Sbjct: 227 APQFSPTGNLSWLQMKRDGYESDKNDI-IVEFKGIKTNLTANWDGTVDNFIWSKDGKTVF 285

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLIN 432
           F    DG    +L+S++  G  +  I 
Sbjct: 286 FVAPIDGTK--QLFSVNFPGLTKIAIQ 310



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 58/198 (29%), Gaps = 9/198 (4%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                +   + +       T         P+FSP           D        +     
Sbjct: 199 STNTDIYEYNLETQKTTNKTDGNLGYDTAPQFSPTGNLSWLQMKRDGYESDKNDIIVEFK 258

Query: 248 RAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-----NATERLTNTL 301
                +  N+   +    +S +GK        D    ++SV+            +LTN  
Sbjct: 259 GIKTNLTANWDGTVDNFIWSKDGKTVFFVAPIDGTKQLFSVNFPGLTKIAIQVRQLTNGD 318

Query: 302 F-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           F +N    +S D   IV  +D     +++      +  K++S     +Y     S     
Sbjct: 319 FDVNDLVGFSGD-DIIVTRTDMNHAGEIFSFNLKKNTWKQLSNVNTDTYKTLALSKTEKR 377

Query: 361 IAFTKFSGEKFAIGVMKK 378
              T   G+K  + V+  
Sbjct: 378 -YVTTTDGKKMLVWVILP 394



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 71/217 (32%), Gaps = 32/217 (14%)

Query: 219 FSPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            S + + V +     + ++      +            I + + ++     S +GK  + 
Sbjct: 38  ISKDAKNVVFKVSTPSVEENKSHSKFYTIPVNGGNATEIKDTKDILADKNISPDGKYVVY 97

Query: 275 --------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGK 325
                    + KD    +   D       ++ + L      +++      VF   +++G 
Sbjct: 98  NEEVKIDKVLGKDFYPKLDKSDA------QIYDGLDYRHWDTWNEGKFNHVFYKENKDGA 151

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKF------AIGVMK 377
           + + +++    D  +     +  Y   +WSP    I +   K +G  +       I    
Sbjct: 152 KGIDILKGENFDSPQKPFGGDEDY---IWSPDSKSIFYVCKKKAGTAYAISTNTDIYEYN 208

Query: 378 KDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDG 412
            +  +     +       AP +SP+G       K+DG
Sbjct: 209 LETQKTTNKTDGNLGYDTAPQFSPTGNLSWLQMKRDG 245



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 66/208 (31%), Gaps = 43/208 (20%)

Query: 266 SSNGKRALISVQKDE------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S + K  +  V              Y++ +       + +T  I    + SPD   +V+ 
Sbjct: 39  SKDAKNVVFKVSTPSVEENKSHSKFYTIPVNGGNATEIKDTKDILADKNISPDGKYVVYN 98

Query: 320 SDRE-----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            + +     GK+    +  + +       D         W+ +G                
Sbjct: 99  EEVKIDKVLGKDFYPKLDKSDAQI----YDGLDYRHWDTWN-EGKF---------NHVFY 144

Query: 375 VMKKDGSQERLLVEDSNLQAPT----------WSPSGRSLIFSRKKDGD------TGSKL 418
              KDG++   +++  N  +P           WSP  +S+ +  KK         T + +
Sbjct: 145 KENKDGAKGIDILKGENFDSPQKPFGGDEDYIWSPDSKSIFYVCKKKAGTAYAISTNTDI 204

Query: 419 YSIDLNGRNETLINTP--AYASDPQWVG 444
           Y  +L  +  T        Y + PQ+  
Sbjct: 205 YEYNLETQKTTNKTDGNLGYDTAPQFSP 232


>gi|149244152|ref|XP_001526619.1| transcriptional repressor TUP1 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146449013|gb|EDK43269.1| transcriptional repressor TUP1 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 629

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 69/218 (31%), Gaps = 31/218 (14%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT-----RIDRAPKR------IGNFR 257
               ++   RFS + + +A        +  V   +          +P+         N  
Sbjct: 313 DHSSVVCCVRFSKDGKYIATGCNKTTQVFNVETGELVAKLVDDSSSPELKEEDAASSNGD 372

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQI 316
             I +  FS +GK    +  +D+ + I+  DL +    ++      +  S  + PD  ++
Sbjct: 373 LYIRSVCFSPDGKLLA-TGAEDKLIRIW--DLATKRIIKVLRGHEQDIYSLDFFPDGDRL 429

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           V  S   G   + +     S    ++   E        SP G LIA          + V 
Sbjct: 430 VSGS---GDRSVRIWSLRSSQCT-LTLSIEDGVTTVAVSPDGKLIAAGSLDRT---VRVW 482

Query: 377 KKDGSQERLLVEDSN---------LQAPTWSPSGRSLI 405
                     ++  N         + +  +S +G  + 
Sbjct: 483 DSTTGFLVERLDSGNESGNGHEDSVYSVAFSNNGNQIA 520



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 50/326 (15%), Positives = 108/326 (33%), Gaps = 48/326 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ I  G ++     ++++V+  + +      SS    ++          +      GD 
Sbjct: 327 GKYIATGCNKTT---QVFNVETGELVAKLVDDSSSPELKE----------EDAASSNGDL 373

Query: 174 NSRILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             R +  S       +G     + + D     I  +    +Q ++   F P+  ++   +
Sbjct: 374 YIRSVCFSPDGKLLATGAEDKLIRIWDLATKRIIKVLRGHEQDIYSLDFFPDGDRLVSGS 433

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D      V +   R  +    +      +     S +GK    +   D  + ++  D  
Sbjct: 434 GDR----SVRIWSLRSSQCTLTLSIEDG-VTTVAVSPDGKLIA-AGSLDRTVRVW--DST 485

Query: 291 SN-ATERL--TNTLFINISAS-----YSPDSSQIVFES-DREGKEQLYVMQSNG-----S 336
           +    ERL   N        S     +S + +QI   S DR     + +    G     S
Sbjct: 486 TGFLVERLDSGNESGNGHEDSVYSVAFSNNGNQIASGSLDRT----VKLWNLEGKSDKNS 541

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAP 395
           + +      +        +P  + I     S ++  I   +  G+   +L    N + + 
Sbjct: 542 NCEATYIGHKDFVLSVCCTPNNEYIL--SGSKDRGVIFWDQASGNALLMLQGHRNSVISV 599

Query: 396 TWSPS--GRSLIFSRKKDGDTGSKLY 419
             S +  G   IF+    GD  ++++
Sbjct: 600 AVSSNSQGTEGIFATG-SGDCKARIW 624


>gi|158520321|ref|YP_001528191.1| hypothetical protein Dole_0304 [Desulfococcus oleovorans Hxd3]
 gi|158509147|gb|ABW66114.1| conserved hypothetical protein [Desulfococcus oleovorans Hxd3]
          Length = 422

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 57/157 (36%), Gaps = 16/157 (10%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S + ++    V         +VD        LT    +   A +SPDS ++       G
Sbjct: 278 VSPDNRKIAAIVAPSFGRWTMAVD---GEPWALTFGDMV-TDAVFSPDSRRLACL----G 329

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           KE      +        + D     + PV+SP   ++A    S  K+ I +   DG    
Sbjct: 330 KENERYTVAVDEKAWNTTFD---MAWKPVFSPDSSMVAAKVASNGKYTIAL---DGKTWG 383

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +   L  P +SP G+ L+    ++G    ++  +
Sbjct: 384 RSFD--ALWDPVFSPDGKKLLCRCVENGKYFRRVVPV 418



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 64/195 (32%), Gaps = 46/195 (23%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRF--------SPNQQKVAYATYDDEDILRVYLMDT 244
           L  +  DG    +       ++++ RF        SP+ +K+A                 
Sbjct: 247 LAPVMADGG---WTLAENGNLIWDKRFIQVWHQMVSPDNRKIAAIV-----APSFGRWTM 298

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRAL--------ISVQKDEAMDIYSVDLQSNATER 296
            +D  P  +  F  M+    FS + +R           +V  DE     + D+       
Sbjct: 299 AVDGEPWALT-FGDMVTDAVFSPDSRRLACLGKENERYTVAVDEKAWNTTFDMA------ 351

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                       +SPDSS +  +    GK   Y +  +G    R       + +DPV+SP
Sbjct: 352 --------WKPVFSPDSSMVAAKVASNGK---YTIALDGKTWGR----SFDALWDPVFSP 396

Query: 357 QGDLIAFTKFSGEKF 371
            G  +        K+
Sbjct: 397 DGKKLLCRCVENGKY 411



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 27/118 (22%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY--------SPDSSQIV 317
           S +G++               V++         N       A++        SPD    V
Sbjct: 35  SPDGEKVA-----------AIVNVDEGEFNVCVNGEAWEREANFEKAWYLRFSPDGRLTV 83

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             S+    +  + +  +G   +    +     +D  +S  G +IA    +  ++AI V
Sbjct: 84  IASE----DMAWTVVVDGESWE----ESFDYVWDTRFSTDGSVIAAATQADGEYAIAV 133



 Score = 39.6 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 19/155 (12%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            S  + + EP  SP+ +KVA     DE    V +       A +R  NF       RFS 
Sbjct: 23  QSDYKWVEEPYASPDGEKVAAIVNVDEGEFNVCVN----GEAWEREANFEKAWYL-RFSP 77

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+  +I+ +  +      VD +S      +     +    +S D S I   +  +G+  
Sbjct: 78  DGRLTVIASE--DMAWTVVVDGESWEE---SFDYVWDT--RFSTDGSVIAAATQADGE-- 128

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            Y +  +G   +    ++  +      S  G   A
Sbjct: 129 -YAIAVDGVAWE----NRYGNMNCMHLSADGKNSA 158


>gi|59802499|gb|AAX07493.1| WD-repeat protein [Gemmata sp. Wa1-1]
          Length = 279

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 74/210 (35%), Gaps = 16/210 (7%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N      S    ++    SP+ + +  A+ D           +     P+ +        
Sbjct: 50  NSLEQKDSNGGNIWSASMSPDGKYLMTASDDSAVTFWNLRTMSAELSFPESVSTK----- 104

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              FS +G+    +  ++  + I+  D                 S +Y+PD S++   + 
Sbjct: 105 TAAFSPDGRHLA-TGNRNSKVRIW--DWTGQVPLVELRHRGTVHSLTYNPDGSRLA-SAG 160

Query: 322 REGKEQLYVMQSNG----SDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            +GK +++ +++ G    +  + +    +   + +   ++P G  +A + + G    I  
Sbjct: 161 SDGKVRVWNVKNVGVTRDAPVELLMELSEHRRAVYSVAYNPDGSKLASSGWDG-YVRIWD 219

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  + +   D +  +  +S  G+ + 
Sbjct: 220 AATGTQLQSIKGHDGDAWSVAFSNCGKWVA 249



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 94/238 (39%), Gaps = 28/238 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRS 258
           G   R +       ++   F  + +++A     +  +++++       R   ++  +   
Sbjct: 4   GPEPRVVLNGDGGPVWALTF-LDNERLA--MGLESGVVKIWDWQKATPRNSLEQKDSNGG 60

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIV 317
            I +   S +GK   ++   D A+  +  +L++ + E L+    ++  +A++SPD   + 
Sbjct: 61  NIWSASMSPDGKYL-MTASDDSAVTFW--NLRTMSAE-LSFPESVSTKTAAFSPDGRHLA 116

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              +R  K +++           +      +     ++P G  +A +  S  K  +  +K
Sbjct: 117 -TGNRNSKVRIWDW---TGQVPLVELRHRGTVHSLTYNPDGSRLA-SAGSDGKVRVWNVK 171

Query: 378 KDG----SQERLLVEDSNLQAPTWS----PSGRSLI------FSRKKDGDTGSKLYSI 421
             G    +   LL+E S  +   +S    P G  L       + R  D  TG++L SI
Sbjct: 172 NVGVTRDAPVELLMELSEHRRAVYSVAYNPDGSKLASSGWDGYVRIWDAATGTQLQSI 229



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 68/183 (37%), Gaps = 20/183 (10%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSS---NGKRALISVQKDEAMDIYSVDLQS--NATERLTN 299
                P+ + N       P ++    + +R  + ++    + I+     +  N+ E+  +
Sbjct: 2   ESGPEPRVVLNGDG---GPVWALTFLDNERLAMGLE-SGVVKIWDWQKATPRNSLEQKDS 57

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 SAS SPD   ++  SD +     + +++  ++   +S  +  S     +SP G 
Sbjct: 58  NGGNIWSASMSPDGKYLMTASD-DSAVTFWNLRTMSAE---LSFPESVSTKTAAFSPDGR 113

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +A          + +    G    + L     + + T++P G  L        D   ++
Sbjct: 114 HLA---TGNRNSKVRIWDWTGQVPLVELRHRGTVHSLTYNPDGSRLA---SAGSDGKVRV 167

Query: 419 YSI 421
           +++
Sbjct: 168 WNV 170


>gi|186684531|ref|YP_001867727.1| protein kinase [Nostoc punctiforme PCC 73102]
 gi|186466983|gb|ACC82784.1| protein kinase [Nostoc punctiforme PCC 73102]
          Length = 641

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 54/150 (36%), Gaps = 9/150 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A  + D      + L D    +    +      + +  FS +G + L +  
Sbjct: 303 AISPDSHTLASGSDDK----NIKLWDLNTKKVLANLSGHSQAVKSVAFSPDG-QILATAS 357

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + ++  D        L ++  +  S ++SPD   +   S     + + +   N   
Sbjct: 358 DDKTIKLWQFDTLKEICTLLGHSHAVK-SVAFSPDGQILASGS---WDKTIKLWDVNTGT 413

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +       +       +SPQG L+A   + 
Sbjct: 414 EICTITGHQLQVNSVAFSPQGQLLASASYD 443



 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/283 (17%), Positives = 99/283 (34%), Gaps = 39/283 (13%)

Query: 164 QSITGEKGDFNSRILFV----SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            ++TG  G  +S         S ++ SG    ++ + D +   +        Q +    F
Sbjct: 287 HTLTGHSGTLSSVNALAISPDSHTLASGSDDKNIKLWDLNTKKVLANLSGHSQAVKSVAF 346

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ Q +A A+ D    ++++  DT  +     +      + +  FS +G + L S   D
Sbjct: 347 SPDGQILATASDD--KTIKLWQFDTLKEICT--LLGHSHAVKSVAFSPDG-QILASGSWD 401

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGK-EQLYVMQSNGSD 337
           + + ++ V+        +T       S ++SP    +   S DR  +  Q+ V+      
Sbjct: 402 KTIKLWDVN-TGTEICTITGHQLQVNSVAFSPQGQLLASASYDRTIRLWQIPVLGRVRGA 460

Query: 338 QKRIS-------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK----------KDG 380
             R++       Q    S     +S   + I  T +        +++            G
Sbjct: 461 GSRLAVSVDEREQGDMNSAELKDYSQGAEDIPLTPYPLPPAPFPLVQNRPCYSLLSTLSG 520

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               +L          +SP G+ L        D   KL+ ++ 
Sbjct: 521 HAWAVLT-------VAFSPDGKMLATGSD---DNTIKLWEVNT 553



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 7/137 (5%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + SPDS  +   SD    + + +   N             +     +SP G ++A T   
Sbjct: 303 AISPDSHTLASGSD---DKNIKLWDLNTKKVLANLSGHSQAVKSVAFSPDGQILA-TASD 358

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            +   +           LL     +++  +SP G+ L        D   KL+ ++     
Sbjct: 359 DKTIKLWQFDTLKEICTLLGHSHAVKSVAFSPDGQILASGSW---DKTIKLWDVNTGTEI 415

Query: 428 ETLINTPAYASDPQWVG 444
            T+       +   +  
Sbjct: 416 CTITGHQLQVNSVAFSP 432


>gi|301310636|ref|ZP_07216575.1| putative alanyl dipeptidyl peptidase [Bacteroides sp. 20_3]
 gi|300832210|gb|EFK62841.1| putative alanyl dipeptidyl peptidase [Bacteroides sp. 20_3]
          Length = 830

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 96/311 (30%), Gaps = 51/311 (16%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +T  K    S  L+ + + + G     L  +D        L P+  +  F   F+P++  
Sbjct: 239 LTTAKWMPKSNRLYYTRTGLDGT---ELVTVDPATYQQTVLVPNLPKGRFV--FTPDEST 293

Query: 226 VAYATYD---------------------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           + Y   +                       D   ++  D +     +++    +      
Sbjct: 294 LLYTVEEEGPKEGTDLIRVLEPADRIPGFRDRSFIWRYDLKTGLY-EQLTFGHTDTYIND 352

Query: 265 FSSNGKRALISVQ-------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI- 316
            S++ +  L S               +Y +DLQ+ A + +         A++SPD  Q+ 
Sbjct: 353 ISTDSRYLLFSTSDRVYTSLPHSLGSLYKLDLQTMAIDTIWEKAPYVNQAAFSPDGKQLL 412

Query: 317 ------VFES----------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                  F+                 QL++          +++D   +  D VW+     
Sbjct: 413 VAGAGDAFDGIGRNIKQGQISNSYDGQLFLYDLASRKASPLTKDFNPNVIDAVWNRFNGQ 472

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           I       +   I        + + +    ++           ++F   +     ++LY+
Sbjct: 473 IYILCEDEDYQRIYTCDPANGKIKQVAASEDIIMSYALADNAPVLFYYGQSASNANRLYA 532

Query: 421 IDLNGRNETLI 431
            DL G    L+
Sbjct: 533 YDLKGGKNRLV 543



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/373 (10%), Positives = 104/373 (27%), Gaps = 65/373 (17%)

Query: 106 LGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           L +   V G +   G       F ++ V D+      +    P  ++ +   ++ +    
Sbjct: 101 LNSDRYVKGTLDISGPG----AFEVF-VNDKPVGASSELVMEPRRYQVVVKYLTAETDTC 155

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
               K  F S       + ++   + +L            +   +D        SPN + 
Sbjct: 156 PPSLKATFKSEAEAKVVASLNPEKRYTLL----------NILEGKDFQGV--SVSPNGKY 203

Query: 226 -VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +        +               + +    S +   ++     R   +    +  ++
Sbjct: 204 ALVKYVNRFPEGKSESYGQLMDAATGRVLLQDGSFLTTAKWMPKSNRLYYTRTGLDGTEL 263

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----------------- 327
            +VD  +     L   L       ++PD S +++  + EG ++                 
Sbjct: 264 VTVDPATYQQTVLVPNL-PKGRFVFTPDESTLLYTVEEEGPKEGTDLIRVLEPADRIPGF 322

Query: 328 -----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-------AFTKFSGEKFAIGV 375
                ++         ++++     +Y +   S     +        +T       ++  
Sbjct: 323 RDRSFIWRYDLKTGLYEQLTFGHTDTYIN-DISTDSRYLLFSTSDRVYTSLPHSLGSLYK 381

Query: 376 MKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFS---------------RKKDGDTGSKLY 419
           +         +  +   +    +SP G+ L+ +                +       +L+
Sbjct: 382 LDLQTMAIDTIWEKAPYVNQAAFSPDGKQLLVAGAGDAFDGIGRNIKQGQISNSYDGQLF 441

Query: 420 SIDLNGRNETLIN 432
             DL  R  + + 
Sbjct: 442 LYDLASRKASPLT 454


>gi|260554921|ref|ZP_05827142.1| senescence marker protein-30 [Acinetobacter baumannii ATCC 19606]
 gi|260411463|gb|EEX04760.1| senescence marker protein-30 [Acinetobacter baumannii ATCC 19606]
          Length = 292

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 56/159 (35%), Gaps = 12/159 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQI----LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           L  +D D  N++++      +    L + R     + V  +    ED     L     D 
Sbjct: 75  LYQLDFDTGNLKFICNPEPDLPQNRLNDGRVDRQGRFVFGSMNRLEDGNTASLYRLDADY 134

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +++ N  +   +  +S +G +   +      +  Y  DL++      T    I+ S  
Sbjct: 135 KIEKLENNINTSNSICWSPDGTKLYFADTWQGEIWSYDYDLETGQISNKTIFCKIDTSDG 194

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            S D S +    DREG    Y+  +     + +    + 
Sbjct: 195 GSADGSTV----DREG----YLWNAKVYSGQLVRYRPDG 225



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 38/256 (14%), Positives = 84/256 (32%), Gaps = 48/256 (18%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL--RVYLMDTRIDRAPKRIGNFRSMI 260
           I+ L   + ++   P +   +Q++ +    D  +     +  + R     K+IG+F    
Sbjct: 3   IKVLVDVKTKLGECPTWDAVRQRLFWVDIVDGRLFCCDEFGGNIRAWEVHKKIGSFALQE 62

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS-----Q 315
                  NG    I   +D    +Y +D  +   + +      ++  +   D       +
Sbjct: 63  NY-----NG---AIVALEDG---LYQLDFDTGNLKFI-CNPEPDLPQNRLNDGRVDRQGR 110

Query: 316 IVFESD---REGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            VF S     +G    LY + ++   +K   ++   +     WSP G  + F      + 
Sbjct: 111 FVFGSMNRLEDGNTASLYRLDADYKIEKL--ENNINTSNSICWSPDGTKLYFADTWQGEI 168

Query: 372 AIGVMKKDGSQE-------RLLVEDSNLQAPTWSPSGRSLIFSRKKDGD------TGSKL 418
                  +  Q        ++   D        S  G ++     ++G          +L
Sbjct: 169 WSYDYDLETGQISNKTIFCKIDTSDGG------SADGSTV----DREGYLWNAKVYSGQL 218

Query: 419 YSIDLNGRNETLINTP 434
                +G+ + +I  P
Sbjct: 219 VRYRPDGKIDRIIEMP 234


>gi|121699266|ref|XP_001267964.1| WD repeat protein [Aspergillus clavatus NRRL 1]
 gi|119396106|gb|EAW06538.1| WD repeat protein [Aspergillus clavatus NRRL 1]
          Length = 534

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 70/210 (33%), Gaps = 18/210 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              ++L     + +   RFSP+   +A           V + D+R  +         + I
Sbjct: 163 YRQKFLLRGHLRGVSAVRFSPDATMIA----SGGADGAVKVWDSRSGKLIHTFEGHLAGI 218

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVF 318
               +  +G     S   D+ + ++  ++ +     +            ++SP  + +V 
Sbjct: 219 STISWGPDGTTIA-SGSDDKTIRLW--NVLTGKAHPIPFVGHHNYVYQIAFSPKGNILVS 275

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E +++     +   R                 G LIA     G    I +   
Sbjct: 276 GSY---DEAVFLWDVRTASVMRSLPAHSDPVGGIDVVWDGTLIASCATDG---LIRIWDT 329

Query: 379 DGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
              Q  R LV + N  + A  +SP+G+ ++
Sbjct: 330 ATGQCLRTLVHEDNPPVTAVKFSPNGKFVL 359



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 66/197 (33%), Gaps = 17/197 (8%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G    R    +  + SG    ++ V D     + +        +    + P+   +A  
Sbjct: 174 RGVSAVRFSPDATMIASGGADGAVKVWDSRSGKLIHTFEGHLAGISTISWGPDGTTIASG 233

Query: 230 TYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           + D      + L +    +  P       + +    FS  G   L+S   DEA+ ++ V 
Sbjct: 234 SDDK----TIRLWNVLTGKAHPIPFVGHHNYVYQIAFSPKGN-ILVSGSYDEAVFLWDVR 288

Query: 289 LQSNATERLTNTL----FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             S     L         I++   +  D + I   +  +G  +++   + G   + +  +
Sbjct: 289 TAS-VMRSLPAHSDPVGGIDV--VW--DGTLIASCAT-DGLIRIWDT-ATGQCLRTLVHE 341

Query: 345 KEASYFDPVWSPQGDLI 361
                    +SP G  +
Sbjct: 342 DNPPVTAVKFSPNGKFV 358


>gi|307154976|ref|YP_003890360.1| Serine/threonine-protein kinase-like domain-containing protein
           [Cyanothece sp. PCC 7822]
 gi|306985204|gb|ADN17085.1| Serine/threonine-protein kinase-like domain protein [Cyanothece sp.
           PCC 7822]
          Length = 623

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 75/224 (33%), Gaps = 16/224 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +                  +    FSP+ + +A ++ D      + +   +
Sbjct: 341 SGGADWTIKLWSLKTGQEIDTLIGHTDKITAIAFSPDGRFLASSSCDR----SIRIYHLQ 396

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 ++    + + +  FS N  R L S   D+ + I++V       E      ++N 
Sbjct: 397 RQSLIHKLLGHTNWVSSIAFSPN-SRLLASGSFDKTIKIWNVQ-SGKQLENFVCRGYMNW 454

Query: 306 S--ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               ++ P  S +       G   +Y    +   ++              +SP G ++A 
Sbjct: 455 VKCLAFHPFQSILA---SGNGDNSIYFFDLHNKSKEFFLIGHIHIINSLAFSPDGQVLA- 510

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLI 405
           +    +   I     D  +    + D  ++A    +SP G+ L 
Sbjct: 511 SASDDKTVKIW--SLDTRKVINNLSDYLVRANTVAFSPDGKILA 552



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 71/189 (37%), Gaps = 11/189 (5%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L   +  +    +      I A  FS +G+    S   D ++ IY +  QS   + 
Sbjct: 346 WTIKLWSLKTGQEIDTLIGHTDKITAIAFSPDGRFLA-SSSCDRSIRIYHLQRQSLIHKL 404

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDP-VW 354
           L +T ++  S ++SP+S  +   S     + + +    +G   +        ++     +
Sbjct: 405 LGHTNWV-SSIAFSPNSRLLASGSF---DKTIKIWNVQSGKQLENFVCRGYMNWVKCLAF 460

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            P   ++A        +   +  K   +  L+     + +  +SP G+ L  +     D 
Sbjct: 461 HPFQSILASGNGDNSIYFFDLHNKS-KEFFLIGHIHIINSLAFSPDGQVLASASD---DK 516

Query: 415 GSKLYSIDL 423
             K++S+D 
Sbjct: 517 TVKIWSLDT 525


>gi|332995541|gb|AEF05596.1| hypothetical protein ambt_20525 [Alteromonas sp. SN2]
          Length = 176

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 2/123 (1%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           K I + +     P F  + +  L + +  E  DI   +L++   E L+N+     S +  
Sbjct: 47  KNITSRKGYDNQPYFVDDNQSLLYTSEIGEQTDILRYNLKTQEIENLSNSPENEYSPTPM 106

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            + ++       +GK++L+  Q NG +Q+R     EA      W      +  T   G+ 
Sbjct: 107 ENGTEYSVIYAVDGKQELWAYQLNG-EQRRPLYSGEALIGYHAWVDD-KQVLVTVLEGKG 164

Query: 371 FAI 373
             +
Sbjct: 165 MNL 167



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 38/116 (32%), Gaps = 8/116 (6%)

Query: 281 AMDIYSVDLQS-------NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             DI+  DL            + +T+    +    +  D+  +++ S+   +  +     
Sbjct: 26  GTDIFVADLSVQNGQLKLGELKNITSRKGYDNQPYFVDDNQSLLYTSEIGEQTDILRYNL 85

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              + + +S   E + + P     G   +       K  +   + +G Q R L   
Sbjct: 86  KTQEIENLSNSPE-NEYSPTPMENGTEYSVIYAVDGKQELWAYQLNGEQRRPLYSG 140


>gi|170101538|ref|XP_001881986.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164643341|gb|EDR07594.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 759

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 57/145 (39%), Gaps = 9/145 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G+R   +   D ++ I+  +      E L       +S ++SP  +++V  S ++
Sbjct: 584 AISPDGRRIA-AGFADGSVRIWDTETDRPVGEPLQGHRRPVLSVAFSPSGTRMVSGS-KD 641

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-- 381
           G  +++  + NGS      Q          +SP+   IA     G    I +   +    
Sbjct: 642 GTIRIWDAE-NGSPLGEPLQGHNDPVLSVAFSPEDTRIASGSEDGT---IRIWDAETGAP 697

Query: 382 -QERLLVEDSNLQAPTWSPSGRSLI 405
             E L   D  + +  +SP  + ++
Sbjct: 698 LGEPLEGHDRLVLSIAFSPDSKRIV 722



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 67/196 (34%), Gaps = 13/196 (6%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQ 223
            +   KG     I      + +G    S+ + D +             + +    FSP+ 
Sbjct: 573 HLQDVKGFAGCAISPDGRRIAAGFADGSVRIWDTETDRPVGEPLQGHRRPVLSVAFSPSG 632

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            ++   +   +D               + +      +L+  FS    R   S  +D  + 
Sbjct: 633 TRMVSGS---KDGTIRIWDAENGSPLGEPLQGHNDPVLSVAFSPEDTRIA-SGSEDGTIR 688

Query: 284 IYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKR 340
           I+  D ++ A   E L     + +S ++SPDS +IV  SD    + + +  +  GS    
Sbjct: 689 IW--DAETGAPLGEPLEGHDRLVLSIAFSPDSKRIVSGSD---DKTIRIWNAETGSPVGG 743

Query: 341 ISQDKEASYFDPVWSP 356
             +          +SP
Sbjct: 744 PLRGHNDWIRSVAFSP 759



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 69/178 (38%), Gaps = 22/178 (12%)

Query: 150 SWRKIAHTISD------------DIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVM 196
             R+IA   +D             + + + G +    S     S +  VSG    ++ + 
Sbjct: 588 DGRRIAAGFADGSVRIWDTETDRPVGEPLQGHRRPVLSVAFSPSGTRMVSGSKDGTIRIW 647

Query: 197 DR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           D  +G+ +       +  +    FSP   ++A  + D    +R++  +T      + +  
Sbjct: 648 DAENGSPLGEPLQGHNDPVLSVAFSPEDTRIASGSED--GTIRIWDAETGA-PLGEPLEG 704

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSP 311
              ++L+  FS + KR + S   D+ + I+  + ++ +     L        S ++SP
Sbjct: 705 HDRLVLSIAFSPDSKRIV-SGSDDKTIRIW--NAETGSPVGGPLRGHNDWIRSVAFSP 759


>gi|219110519|ref|XP_002177011.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411546|gb|EEC51474.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1095

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 56/165 (33%), Gaps = 25/165 (15%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQI 316
           + A +F  +GK   I        D     + ++  E +T  +  +       +SPD   +
Sbjct: 486 VYAVQFRPDGKYLAI-----GGFDGTVAIVATSNWE-VTAEIARDGLVLCLDWSPDGKLL 539

Query: 317 VF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------- 368
               SD+       ++ ++ S + R    + A      W P G L+A             
Sbjct: 540 ALGASDKS----CAIVHADSSWKIRTEFHRPADVVAVKWHPNGRLLAVGSSDVAIVEAHS 595

Query: 369 --EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +  I      GS  R  V      A  WSP+G  L+F+    
Sbjct: 596 WITRHEIDTKPTAGSPLRRSV--YKAHALCWSPNGSYLMFAGTNG 638



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 62/188 (32%), Gaps = 26/188 (13%)

Query: 197 DRDGANIRYLTP----SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           D DG +   L P    SR   ++  +F P+ + +A   +D      V ++ T        
Sbjct: 465 DPDGESKLRLEPLVEISRVDRVYAVQFRPDGKYLAIGGFDG----TVAIVATSNWEVTAE 520

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSP 311
           I     ++L   +S +GK   +            V   S+   R       ++ A  + P
Sbjct: 521 IAR-DGLVLCLDWSPDGKLLALGAS---DKSCAIVHADSSWKIRTEFHRPADVVAVKWHP 576

Query: 312 DSSQIVFES---------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +   +   S             + ++    + GS  +R             WSP G  + 
Sbjct: 577 NGRLLAVGSSDVAIVEAHSWITRHEIDTKPTAGSPLRR----SVYKAHALCWSPNGSYLM 632

Query: 363 FTKFSGEK 370
           F   +G +
Sbjct: 633 FAGTNGTR 640


>gi|226490819|ref|NP_001149047.1| actin-related protein 2/3 complex subunit 1B [Zea mays]
 gi|195624284|gb|ACG33972.1| actin-related protein 2/3 complex subunit 1B [Zea mays]
          Length = 375

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 80/229 (34%), Gaps = 37/229 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+Q  +A+   + E  + +Y   T        +     M+    +S +  + + +V 
Sbjct: 17  AWSPDQSMIAFCPNNHE--VHIYKFFTDKWEKLHVLSKHDQMVSGIDWSKSSNKIV-TVS 73

Query: 278 KDEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D    +++ +        +    N   + +   +SP  ++    S   G + + +    
Sbjct: 74  HDRNSYVWTQEGSDWVPTLVILKLNRAALCVQ--WSPKENKFAVGS---GAKSVCICYYE 128

Query: 335 GSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQ------ 382
             +     K I +  E+S     W P    +A +   G    F+  +   D         
Sbjct: 129 QENNWWISKVIRKKHESSVTSLAWHPNNIYLATSSTDGKCRVFSTFIKGVDTRGSKSSTS 188

Query: 383 ---------ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                     +L +  + +    WSPSG++L ++        S +Y ID
Sbjct: 189 TDSKFGEQIAQLDLSSTWVFGVRWSPSGKTLAYA-----GHNSMIYFID 232


>gi|168705063|ref|ZP_02737340.1| peptidase C14, caspase catalytic subunit p20 [Gemmata obscuriglobus
           UQM 2246]
          Length = 952

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/238 (17%), Positives = 77/238 (32%), Gaps = 36/238 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+   +A           V L D        R+    +++    F+ +G+   ++   
Sbjct: 362 FSPDGSALAACGRWGG----VELWDVATGALRGRLDGSETVVRGLAFAPDGRSLAVA--- 414

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------FESDREGKEQLYV 330
                I   D  + A          +   S+S D   ++        F +  +G+E    
Sbjct: 415 -GPAGIGVWDRATGAEVWRREPAAPDAFVSFSSDGRTLLECGGEAVRFRAAADGRECRAA 473

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED- 389
            ++ G    ++      +      SP G L+A         A+G+ + D  +        
Sbjct: 474 ARAEGLSPVQVLP----AIAGRRVSPDGRLVAAVADG----AVGLWEVDTGRPVGPAGGP 525

Query: 390 -SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN--GRNET-----LINTPAYASD 439
              +   T+S  G +L    +        L  ID    GR        L+ T  +ASD
Sbjct: 526 RGPVTGVTFSGDGTTLATVSRL---RQLHLTPIDATAAGREVRVDRPGLLATDVWASD 580



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 13/143 (9%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G+   ++        +  +D  S     L N         +SPD S +       
Sbjct: 322 AVSPDGRLVAVAT---GGHPVAVLDAGSGQV--LRNLSGCAHKVVFSPDGSALAACGRWG 376

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G E   +        +      E       ++P G  +A    +G    IGV  +    E
Sbjct: 377 GVE---LWDVATGALRGRLDGSETVVRGLAFAPDGRSLAVAGPAG----IGVWDRATGAE 429

Query: 384 RLLVEDSNLQA-PTWSPSGRSLI 405
               E +   A  ++S  GR+L+
Sbjct: 430 VWRREPAAPDAFVSFSSDGRTLL 452



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 69/228 (30%), Gaps = 35/228 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + VA AT           +      + + + N         FS +G        
Sbjct: 322 AVSPDGRLVAVATGGHP-------VAVLDAGSGQVLRNLSGCAHKVVFSPDGSALAACG- 373

Query: 278 KDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +   ++++  D+ + A   RL  +  +    +++PD   +       G   + V      
Sbjct: 374 RWGGVELW--DVATGALRGRLDGSETVVRGLAFAPDGRSLA----VAGPAGIGVWDRATG 427

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +    ++  A      +S  G  +        +F       DG + R     +   +P 
Sbjct: 428 AEVW-RREPAAPDAFVSFSSDGRTLLECGGEAVRFRAA---ADGRECRA-AARAEGLSPV 482

Query: 397 ----------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                      SP GR +        D    L+ +D  GR       P
Sbjct: 483 QVLPAIAGRRVSPDGRLVAAVA----DGAVGLWEVD-TGRPVGPAGGP 525



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 62/177 (35%), Gaps = 19/177 (10%)

Query: 275 SVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                   DI   D  +    ERL       +S S +PD + +V      G  +++ +  
Sbjct: 242 VASVHGTRDICLWDATTGAELERL-EGPEGAVSLSATPDGAALV----VGGTREVWAVGL 296

Query: 334 NGSDQ-----KRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
             +        R+    E    +    SP G L+A          + V+   GS + L  
Sbjct: 297 PPAAAFPLWKHRLPPGPELYPAYCVAVSPDGRLVAVAT---GGHPVAVLDA-GSGQVLRN 352

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR---NETLINTPAYASDPQ 441
                    +SP G +L    +  G     + +  L GR   +ET++   A+A D +
Sbjct: 353 LSGCAHKVVFSPDGSALAACGRWGGVELWDVATGALRGRLDGSETVVRGLAFAPDGR 409



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 25/214 (11%), Positives = 61/214 (28%), Gaps = 21/214 (9%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D     +R      + ++    F+P+ + +A A       + V+   T  +   +   
Sbjct: 380 LWDVATGALRGRLDGSETVVRGLAFAPDGRSLAVA---GPAGIGVWDRATGAEVWRREPA 436

Query: 255 NFRSMILAPRFSSNGKRAL--------ISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
              + +    FSS+G+  L             D      +   +  +  ++     I   
Sbjct: 437 APDAFV---SFSSDGRTLLECGGEAVRFRAAADGRECRAAARAEGLSPVQV--LPAI-AG 490

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              SPD   +   +D      + + + +       +           +S  G  +A    
Sbjct: 491 RRVSPDGRLVAAVAD----GAVGLWEVDTGRPVGPAGGPRGPVTGVTFSGDGTTLATVSR 546

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
             +     +      +E  +     L    W+  
Sbjct: 547 LRQLHLTPIDATAAGREVRVDRPGLLATDVWASD 580


>gi|301115448|ref|XP_002905453.1| notchless family protein [Phytophthora infestans T30-4]
 gi|262110242|gb|EEY68294.1| notchless family protein [Phytophthora infestans T30-4]
          Length = 484

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 59/194 (30%), Gaps = 19/194 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +    FSP+ +++A           V   DT            ++ +L   +
Sbjct: 111 TLQGHSEAILHVSFSPDGKRLA----SGGGDATVRFWDTNTCMPKHTGRGHKNHVLCTAW 166

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSP-----DSSQIVFE 319
           S +G R   S  ++  + ++   L      +          S ++ P        +    
Sbjct: 167 SPDGTRFA-SADRNGEIRLWD-PLTGKQIGQPMKGHKQWVNSLTWEPMHRNATCERFA-S 223

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S ++G   + V  +     + I+     +         G+ + ++        +  M+ +
Sbjct: 224 SSKDGS--IKVWNARTG--RSIASLSGHTDSVECIKWGGEGLLYSASRDRTIKVWAMEGE 279

Query: 380 --GSQERLLVEDSN 391
             G   R L    +
Sbjct: 280 HVGKLVRTLTGHGH 293



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 47/118 (39%), Gaps = 6/118 (5%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                Q +    FSP+ +  A A++D +    V + + +  +    +      +    +S
Sbjct: 367 LTGHQQPVNHLSFSPDGRYFASASFDKK----VKIWNGQTGKFIATLTGHVGAVYQVCWS 422

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DRE 323
           S+  R +++  KD  + ++ +    NA   L+       +  +SP+   +   S DR 
Sbjct: 423 SD-ARLIVTASKDSTVKVWELSEPKNAKTTLSGHADEVYALDWSPNGDMVASGSKDRT 479



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 38/133 (28%), Gaps = 3/133 (2%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  +  +          RLT         S+SPD       S     +++ +  
Sbjct: 343 LVSGSDDFTLFFWEPSESKKPLARLTGHQQPVNHLSFSPDGRYFASASF---DKKVKIWN 399

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                          + +   WS    LI             + +   ++  L      +
Sbjct: 400 GQTGKFIATLTGHVGAVYQVCWSSDARLIVTASKDSTVKVWELSEPKNAKTTLSGHADEV 459

Query: 393 QAPTWSPSGRSLI 405
            A  WSP+G  + 
Sbjct: 460 YALDWSPNGDMVA 472



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 50/124 (40%), Gaps = 6/124 (4%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLT 298
           +   +   +   R+   +  +    FS +G+    S   D+ + I+  + Q+      LT
Sbjct: 354 FWEPSESKKPLARLTGHQQPVNHLSFSPDGRYFA-SASFDKKVKIW--NGQTGKFIATLT 410

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             +       +S D+  IV  + ++   +++ +    + +  +S       +   WSP G
Sbjct: 411 GHVGAVYQVCWSSDARLIV-TASKDSTVKVWELSEPKNAKTTLS-GHADEVYALDWSPNG 468

Query: 359 DLIA 362
           D++A
Sbjct: 469 DMVA 472



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 65/199 (32%), Gaps = 18/199 (9%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           + R    +      IL   FS +GKR            +   D  +   +        ++
Sbjct: 105 VTRCSDTLQGHSEAILHVSFSPDGKRLA---SGGGDATVRFWDTNTCMPKHTGRGHKNHV 161

Query: 306 SAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD----- 359
             + +SPD ++    +DR G+ +L+     G    +  +  +       W P        
Sbjct: 162 LCTAWSPDGTRFA-SADRNGEIRLWD-PLTGKQIGQPMKGHKQWVNSLTWEPMHRNATCE 219

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             A +        +   +   S   L     +++   W   G  L++S  +  D   K++
Sbjct: 220 RFA-SSSKDGSIKVWNARTGRSIASLSGHTDSVECIKWG--GEGLLYSASR--DRTIKVW 274

Query: 420 SIDLN--GRNETLINTPAY 436
           +++    G+    +    +
Sbjct: 275 AMEGEHVGKLVRTLTGHGH 293



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 44/340 (12%), Positives = 102/340 (30%), Gaps = 82/340 (24%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-------------- 217
            +++       +               DG        + +  L++P              
Sbjct: 142 FWDTNTCMPKHTGRGHKNHVLCTAWSPDGTRFASADRNGEIRLWDPLTGKQIGQPMKGHK 201

Query: 218 ------RFSP-----NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  + P       ++ A ++ D      + + + R  R+   +      +   ++ 
Sbjct: 202 QWVNSLTWEPMHRNATCERFASSSKDG----SIKVWNARTGRSIASLSGHTDSVECIKW- 256

Query: 267 SNGKRALISVQKDEAMDIYSVDLQ--SNATERLT------NTLFINI-----SASYSPDS 313
             G+  L S  +D  + +++++ +        LT      NTL +N+     S  +  +S
Sbjct: 257 -GGEGLLYSASRDRTIKVWAMEGEHVGKLVRTLTGHGHRINTLALNVDYVCRSGPFGHNS 315

Query: 314 SQIV------------FESDREGKEQLYVMQSNG------------SDQKRISQDKEASY 349
                           ++  R+G+ +  V  S+                 R++   +   
Sbjct: 316 KSFASREEMQQATLKRYQEVRKGQPERLVSGSDDFTLFFWEPSESKKPLARLT-GHQQPV 374

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFS 407
               +SP G   A   F      + +      +    L      +    WS   R ++ +
Sbjct: 375 NHLSFSPDGRYFASASFDK---KVKIWNGQTGKFIATLTGHVGAVYQVCWSSDARLIVTA 431

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPA---YASDPQWVG 444
            K   D+  K++ +      +T ++  A   YA D  W  
Sbjct: 432 SK---DSTVKVWELSEPKNAKTTLSGHADEVYALD--WSP 466


>gi|194380610|dbj|BAG58458.1| unnamed protein product [Homo sapiens]
          Length = 421

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 83/216 (38%), Gaps = 23/216 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D+
Sbjct: 136 PDVSCLVLATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDK 193

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 194 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 250

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----------- 389
             +  ++S     +SP   L+    +      I      G + R L              
Sbjct: 251 KLEGHQSSVVSCDFSPDSALLVTASYDTN--VIMWDPYTGERLRSLHHTQVDPAMDDSDV 308

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S+L++  +SP G   ++      D   ++++++L
Sbjct: 309 HISSLRSVCFSPEG---LYLATVADDRLLRIWALEL 341



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 85/278 (30%), Gaps = 41/278 (14%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           + D  SR L  + +  +  ++  L + +                 +   FSP+    A++
Sbjct: 2   RVDRESRFLRGTGTGEAVAVEEPLLLAELKPGRPHQFDWKSSCETWSVAFSPDGSWFAWS 61

Query: 230 T------------------YDDEDILRVYLMDTRIDRAPKRIGN-----FRSMILAPRFS 266
                                 E   R    +T+   +PK            +  +P  S
Sbjct: 62  QGHCIVKLIPWPLEEQFIPKGFEAKSRSSKNETKGRGSPKEKTLDCGQIVWGLAFSPWPS 121

Query: 267 SNGKRA---------------LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
              ++                L +   D  + I+ V         L+    +    S++P
Sbjct: 122 PPSRKLWARHHPQVPDVSCLVLATGLNDGQIKIWEVQ-TGLLLLNLSGHQDVVRDLSFTP 180

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             S I+  + R+   +++ +  +G   + +S       +    SP   ++         F
Sbjct: 181 SGSLILVSASRDKTLRIWDLNKHGKQIQVLS-GHLQWVYCCSISPDCSMLCSAAGEKSVF 239

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            +  M+      +L    S++ +  +SP    L+ +  
Sbjct: 240 -LWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASY 276


>gi|124002746|ref|ZP_01687598.1| OmpA family protein [Microscilla marina ATCC 23134]
 gi|123991974|gb|EAY31361.1| OmpA family protein [Microscilla marina ATCC 23134]
          Length = 775

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 82/272 (30%), Gaps = 51/272 (18%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDI--------------LRVYLMDTRIDRAPKRIG 254
           + +   + P  S ++  + + +                    + +         AP++I 
Sbjct: 278 NSEYDEYAPIISADESTLIFTSRRPNTTGGKRDSNDSLFHEDIYISYKSKGYWSAPEKIK 337

Query: 255 NF--RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS----NATERLTNTLFINI--- 305
           +F   +       S +GK+   + + +   ++Y  DL++    +    L     IN    
Sbjct: 338 DFNTSTHESGVALSPDGKQL-FTYRDNRGGNLYVSDLKADYTWSKPRSL--GKHINTIYH 394

Query: 306 SAS--YSPDSSQIVFESDREGKEQ---LYVMQSNGSDQ--KRISQDKEASYFDPVWSP-- 356
             S   S D   + F SDR G +    +Y  +   S +  K ++     +      SP  
Sbjct: 395 EPSVTISADGKTLFFSSDRPGGQGGLDIYKSEKGASGKWGKAVNLGPNINTEQDEDSPFI 454

Query: 357 --QGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDS-------NLQAPTWSPSG 401
              G  + F+            + I     +  +               +      S   
Sbjct: 455 HIDGKTLFFSSRGHRGDSSRYDYDIYQTSLENDEWAKPKNMGYPINTIRDDIHFVLSGDY 514

Query: 402 RSLIFSRKKD-GDTGSKLYSIDLNGRNETLIN 432
           R   +S  K  G     +Y I L   N   +N
Sbjct: 515 RRGYYSSIKGEGSNKHDIYVISLPKYNINKVN 546



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 50/154 (32%), Gaps = 27/154 (17%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG--SDQKRISQDKEASY 349
           N   R  N+ +   +   S D S ++F S R          ++    +   IS   +  +
Sbjct: 271 NNLGRAINSEYDEYAPIISADESTLIFTSRRPNTTGGKRDSNDSLFHEDIYISYKSKGYW 330

Query: 350 FDP---------------VWSPQGDLIAFTKFSGEKFAIGVMKKDG----SQERLLVEDS 390
             P                 SP G  + FT        + V         S+ R L +  
Sbjct: 331 SAPEKIKDFNTSTHESGVALSPDGKQL-FTYRDNRGGNLYVSDLKADYTWSKPRSLGKHI 389

Query: 391 N--LQAPT--WSPSGRSLIFSRKK-DGDTGSKLY 419
           N     P+   S  G++L FS  +  G  G  +Y
Sbjct: 390 NTIYHEPSVTISADGKTLFFSSDRPGGQGGLDIY 423


>gi|148230761|ref|NP_001081923.1| WD repeat-containing protein 1-A [Xenopus laevis]
 gi|4530496|gb|AAD22062.1| actin interacting protein 1 [Xenopus laevis]
          Length = 608

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/282 (16%), Positives = 93/282 (32%), Gaps = 43/282 (15%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   V+++++ D + ++      +    + I NP     + +     A   V  
Sbjct: 9   FASLPQMERGVAKILAGDPKGNNFLYTNGKSVIIRNIDNPAIADIYTE----HAHQAVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           R    G          + R+WD   ++ ++  ++       + IA               
Sbjct: 65  RYAPSGFYIASGDTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-------GANIRYLTP 208
              +           G+    I  ++   +       L     D       G   ++   
Sbjct: 125 EKFASVFLWDTGSSVGEITGNIKVINSVDIKQTRPYRLVTGSDDNCCAFLEGPPFKFKFT 184

Query: 209 SRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
             D   F    RFSP+  K+A A  D     +++L D +       +G  +     I A 
Sbjct: 185 MSDHSRFVNCVRFSPDGSKLASAGADG----QIFLYDGKTGEKVCSLGGSKAHDGGIYAV 240

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +S +G + L S   D+   I+ V   S  T   T  L  ++
Sbjct: 241 SWSPDGTQLL-SASGDKTTKIWDVAANSAVT---TFNLGSDV 278



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 81/282 (28%), Gaps = 57/282 (20%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E+G           +        S+ + + D   I  +           R++P+   +A 
Sbjct: 16  ERGVAKILAGDPKGNNFLYTNGKSVIIRNIDNPAIADIYTEHAHQAVVARYAPSGFYIA- 74

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---------- 278
            + D    LR++    +          F   I    ++ + KR  +  +           
Sbjct: 75  -SGDTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFASVFLW 133

Query: 279 ----------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                          I SVD++     RL              D +   F    EG    
Sbjct: 134 DTGSSVGEITGNIKVINSVDIKQTRPYRLVTGS----------DDNCCAFL---EGPPFK 180

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG------VMKKDGSQ 382
           +    +         D         +SP G  +A     G+ F         V    GS+
Sbjct: 181 FKFTMS---------DHSRFVNCVRFSPDGSKLASAGADGQIFLYDGKTGEKVCSLGGSK 231

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 D  + A +WSP G  L+      GD  +K++ +  N
Sbjct: 232 A----HDGGIYAVSWSPDGTQLL---SASGDKTTKIWDVAAN 266


>gi|322708931|gb|EFZ00508.1| will die slowly [Metarhizium anisopliae ARSEF 23]
          Length = 482

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 72/222 (32%), Gaps = 31/222 (13%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              R +       + + R SPN + +A A+ D      + L D         +    + +
Sbjct: 138 YRPRLVLHGHTGPVSQVRISPNGKFIASASADG----TLKLWDAATGAHMDTLVGHMAGV 193

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--------------NTLFINIS 306
               ++ +      S   D+A+ ++  D  +   +  T              +  +I+  
Sbjct: 194 SCVAWTPDSNTLA-SGSDDKAIRLW--DRVTGRPKTTTRKSIAGQEMAALRGHHNYIHCL 250

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A +SP  + +   S     E +++         R             +   G L+     
Sbjct: 251 A-FSPKGNILASGSY---DEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRDGTLVVSCST 306

Query: 367 SGEKFAIGVMKKDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
            G    I V      Q  R LV + N  +    +SP+GR ++
Sbjct: 307 DG---LIRVWDTSTGQCLRTLVHEDNPAVTNVCFSPNGRFVL 345



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 60/194 (30%), Gaps = 14/194 (7%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++ +    +                 R    +      +   R S NGK    S   D  
Sbjct: 113 DRTRTESYSPRPRQPSPTREPSKPNYRPRLVLHGHTGPVSQVRISPNGKFIA-SASADGT 171

Query: 282 MDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESD---------REGKEQLYVM 331
           + ++  D  + A  + L   +      +++PDS+ +   SD           G+ +    
Sbjct: 172 LKLW--DAATGAHMDTLVGHMAGVSCVAWTPDSNTLASGSDDKAIRLWDRVTGRPKTTTR 229

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           +S    +    +          +SP+G+++A   +    F +  ++       L      
Sbjct: 230 KSIAGQEMAALRGHHNYIHCLAFSPKGNILASGSYDEAVF-LWDVRAGRLMRSLPAHSDP 288

Query: 392 LQAPTWSPSGRSLI 405
           +    +   G  ++
Sbjct: 289 VSGIDFCRDGTLVV 302


>gi|168705236|ref|ZP_02737513.1| WD-repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 956

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 68/464 (14%), Positives = 135/464 (29%), Gaps = 90/464 (19%)

Query: 52  FTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW----NSLG 107
              + +  +   +   V + DL R+ +F           +T   ++     +     +  
Sbjct: 399 VFVWEAPADAKAEPKPVATFDLARARLFRFAPDGRTLAVVTEAWNMVPAGAFLCDLKTQT 458

Query: 108 AQVLVTGRVIK------EGKDRLRVEFR------LWDVKDRKQIIGKKFFSSPASWRKIA 155
           A  + TG V         G  +    F       LWD    KQ+   +     +    + 
Sbjct: 459 AAAIDTGGVRYFEGLAFSGDGKRLGAFADASCFILWDATTGKQLTKYQAIGRMSRAFALN 518

Query: 156 HT-----ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD------RDGANIR 204
           HT      +D           D  +       +   G I       D       D   +R
Sbjct: 519 HTGDTRAAADYSGPKTEFRFTDPETGKKKDGLTGPDGDIYWLTYAADGKTLLAGDPGGVR 578

Query: 205 YLTP--------------SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           +  P                       RF+P+ + +      +  +L  +  +T     P
Sbjct: 579 WWDPVAGKLVRRYEGVAHGHALQEVPARFTPDGKVLV---SHNGHVLLRWNAETGKPLFP 635

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-------TNTLFI 303
           ++     + + A   S +G R      +     +   D  +   +RL       T    I
Sbjct: 636 EQDIGHGATVTAVGLSPDGTRIA---TRGMDNRLCVWDAATG--KRLWHAPDARTKVADI 690

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSPQ 357
           +    + PD + +V        +++    +       ++        K+A  F    S  
Sbjct: 691 D----FGPDGTFLV--VGGPKWDEVTKYDAATGKV-LLTFAVDPKGPKQAGVFSARVSKD 743

Query: 358 GDLIAFTK---FSGEKFAIGVMKKDGSQERL----LVEDSNLQAPTWSPSGRSLIFSRKK 410
           G  +        +G    + V       ERL    L +    +    SP G  L      
Sbjct: 744 GQTVVAHTGPYVAGAPSVVTVWNAITG-ERLKSSPLSDSKWHEFSALSPDGEYLA----- 797

Query: 411 DGDTGSKLYSIDLNGRNE--------TLINTPAYASDPQWVGFM 446
            G  GS+  ++    R+         +L  T  +++D +W+  +
Sbjct: 798 GGMLGSRAVAVAAPDRDLLADAKLPGSLTQTGRFSADGRWLALV 841



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 92/278 (33%), Gaps = 35/278 (12%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G    +   V        ++      DR    I            EP+ SP+ + VA
Sbjct: 333 PITGFGIEKDGTVVTVGPGADVRRWHATDDRSDEPIALPLAGPANTNNEPQVSPDGKLVA 392

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQKDEAMD--I 284
             +    D + V+         PK +  F  +     RF+ +G+   +  +    +    
Sbjct: 393 ACS---RDKVFVWEAPADAKAEPKPVATFDLARARLFRFAPDGRTLAVVTEAWNMVPAGA 449

Query: 285 YSVDLQSNATERLTNTLFINISA-------SYSPDSSQI-VFESDREGKEQLYVMQSNGS 336
           +  DL++           I+          ++S D  ++  F          +++    +
Sbjct: 450 FLCDLKTQTA------AAIDTGGVRYFEGLAFSGDGKRLGAFA-----DASCFILWDATT 498

Query: 337 DQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNL 392
             K++++ +        ++    GD  A   +SG K        +  +++  L   D ++
Sbjct: 499 G-KQLTKYQAIGRMSRAFALNHTGDTRAAADYSGPKTEFRFTDPETGKKKDGLTGPDGDI 557

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
              T++  G++L+      GD G   +   + G+    
Sbjct: 558 YWLTYAADGKTLL-----AGDPGGVRWWDPVAGKLVRR 590


>gi|31982686|ref|NP_067514.2| WD repeat and SOCS box-containing protein 2 [Mus musculus]
 gi|4754062|gb|AAD28809.1|AF072881_1 SOCS box-containing WD protein SWiP-2 [Mus musculus]
 gi|32766221|gb|AAH55100.1| WD repeat and SOCS box-containing 2 [Mus musculus]
 gi|74192226|dbj|BAE34309.1| unnamed protein product [Mus musculus]
 gi|148687859|gb|EDL19806.1| mCG7943, isoform CRA_b [Mus musculus]
          Length = 404

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 84/217 (38%), Gaps = 23/217 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D
Sbjct: 118 APDVSCLILATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRD 175

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + + I+ ++      + L+  L      S SPD S +       G++ +++         
Sbjct: 176 KTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLI 232

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---------- 389
           R  +  ++S     +SP   L+    +      I      G + R L             
Sbjct: 233 RKLEGHQSSVVSCDFSPDSALLVTASYDTS--VIMWDPYTGERLRSLHHTQLEPTMDDSD 290

Query: 390 ---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              S+L++  +SP G   ++      D   ++++++L
Sbjct: 291 VHMSSLRSVCFSPEG---LYLATVADDRLLRIWALEL 324



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 29/247 (11%), Positives = 70/247 (28%), Gaps = 41/247 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT--------------------YDDEDILRVY 240
                         +   FSP+    A++                     ++ +      
Sbjct: 16  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCVVKLVPWPLEEQFIPKGFEAKSRSSKN 75

Query: 241 LMDTRIDRAPKRI---GNFRSMILAPRFSSNGKR---------------ALISVQKDEAM 282
               R     K +        +  +P  S   ++                L +   D  +
Sbjct: 76  DPKGRGSLKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQAPDVSCLILATGLNDGQI 135

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 136 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 194

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 195 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 252

Query: 403 SLIFSRK 409
            L+ +  
Sbjct: 253 LLVTASY 259


>gi|317503691|ref|ZP_07961708.1| OmpA family protein [Prevotella salivae DSM 15606]
 gi|315665212|gb|EFV04862.1| OmpA family protein [Prevotella salivae DSM 15606]
          Length = 683

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 83/264 (31%), Gaps = 37/264 (14%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKV------AYATY--DDEDILRVYLMDTRIDRAPKRI 253
           N   +          P +     K        + +Y  D   +      +     + ++ 
Sbjct: 126 NDTLILNGLASARQAPAWKKQGSKYIVRKMDVFNSYKADYSPVFYGPDHNILYFTSTRKE 185

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +   +        NG     S + D+        +         N+ F   + ++SPD 
Sbjct: 186 ASGDELNGI-TGMKNGD-IFYSERNDKGKWSKPEPI-GGEL----NSAFDEGACAFSPDE 238

Query: 314 SQIVFE---SDREGKEQLYVMQSNGSDQK-------RISQDKEASYFDPVWSPQGDLIAF 363
             +      +D        +M S+ SD          IS D  + +  P  SP G+ + F
Sbjct: 239 RTMYLTQCSTDPVSPRYARLMTSSRSDASWTKPTELPISHDTLSLFAHPAVSPDGNWLYF 298

Query: 364 TKF---SGEKFAIGVMKKD----GSQERL---LVEDSNLQAPTWSPSGRSLIFSRK-KDG 412
           T           +  ++      G  E L   +    N + PT+ P+G  L FS     G
Sbjct: 299 TSDMPGGKGGLDLWRVRITAAGLGGVENLGAPINTAGNEEFPTFRPNGD-LYFSSNGHAG 357

Query: 413 DTGSKLYSIDLNGRNETLINTPAY 436
             G  +Y    + + +  ++ P Y
Sbjct: 358 MGGLDIYIAHFDSQGKATLSHPGY 381



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 20/143 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID----RAPKRIG---NFRS 258
           ++     +   P  SP+   + + +        + L   RI        + +G   N   
Sbjct: 276 ISHDTLSLFAHPAVSPDGNWLYFTSDMPGGKGGLDLWRVRITAAGLGGVENLGAPINTAG 335

Query: 259 MILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERLT------NTLFINISASY 309
               P F  NG     S         +DIY     S     L+      N+   +   ++
Sbjct: 336 NEEFPTFRPNGD-LYFSSNGHAGMGGLDIYIAHFDSQGKATLSHPGYPLNSNADDFGMTF 394

Query: 310 SPDSSQIVFESDRE---GKEQLY 329
               ++  F S+R    G + +Y
Sbjct: 395 EGPHNRGYFSSNRNDSRGYDHIY 417



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 54/191 (28%), Gaps = 56/191 (29%)

Query: 299 NTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF------- 350
           N+   + S   Y PD + + F S R+        +++G +   I+  K    F       
Sbjct: 159 NSYKADYSPVFYGPDHNILYFTSTRK--------EASGDELNGITGMKNGDIFYSERNDK 210

Query: 351 --------------------DPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDGSQERL 385
                                  +SP    +  T+      S     +    +  +    
Sbjct: 211 GKWSKPEPIGGELNSAFDEGACAFSPDERTMYLTQCSTDPVSPRYARLMTSSRSDASWTK 270

Query: 386 LVED-------SNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLN----GRNETL--- 430
             E        S    P  SP G  L F+     G  G  L+ + +     G  E L   
Sbjct: 271 PTELPISHDTLSLFAHPAVSPDGNWLYFTSDMPGGKGGLDLWRVRITAAGLGGVENLGAP 330

Query: 431 INTPAYASDPQ 441
           INT      P 
Sbjct: 331 INTAGNEEFPT 341


>gi|302850062|ref|XP_002956559.1| hypothetical protein VOLCADRAFT_67131 [Volvox carteri f.
           nagariensis]
 gi|300258086|gb|EFJ42326.1| hypothetical protein VOLCADRAFT_67131 [Volvox carteri f.
           nagariensis]
          Length = 493

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 25/263 (9%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           ++R   H  S           G ++     V   + SG    ++ +          +  +
Sbjct: 48  AFRFAGHKAS----HMYRTLAGVYSVAFSPVHALIASGSKDRTVRLWQPTVEGKSTVLKA 103

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    FS + + +A  + D      + +      +    +   ++ +     S +G
Sbjct: 104 HTGTVRGVSFSADGRMLATCSDDK----TIKVWSVATQKFAFTLSGHQNWVRCCAISPDG 159

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLF-----INISASYSPDSSQIVFESDREG 324
            R  +S   D ++ I+  DL S    R+          IN  A + PD + I   S    
Sbjct: 160 -RLAVSGGDDRSVRIW--DLNSKRVVRVFEEQAPAGGLINTVA-FHPDGTCIASGST--- 212

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              L +     +   +  +    +     + P G  +  +        + V      Q  
Sbjct: 213 DASLKLWDLRSNVLLQHYRAHTGAVTHVSFHPTGSFLLSSSLDTT---LKVWDLREGQLL 269

Query: 385 LLVED--SNLQAPTWSPSGRSLI 405
             +           +SPSG    
Sbjct: 270 YTLHGHEGATNGTAFSPSGDYFA 292



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 16/225 (7%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             K  L      G    ++  +   +     FSP    +A  + D      V L    ++
Sbjct: 41  NFKPQLRAFRFAGHKASHMYRTLAGVYSV-AFSPVHALIASGSKDR----TVRLWQPTVE 95

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                +      +    FS++G+    +   D+ + ++SV         L+         
Sbjct: 96  GKSTVLKAHTGTVRGVSFSADGRMLA-TCSDDKTIKVWSV-ATQKFAFTLSGHQNWVRCC 153

Query: 308 SYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDK---EASYFDPVWSPQGDLIAF 363
           + SPD    V      G ++ + +   N     R+ +++           + P G  IA 
Sbjct: 154 AISPDGRLAV----SGGDDRSVRIWDLNSKRVVRVFEEQAPAGGLINTVAFHPDGTCIA- 208

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           +  +     +  ++ +   +        +   ++ P+G  L+ S 
Sbjct: 209 SGSTDASLKLWDLRSNVLLQHYRAHTGAVTHVSFHPTGSFLLSSS 253


>gi|153005291|ref|YP_001379616.1| peptidase S9B dipeptidylpeptidase IV subunit [Anaeromyxobacter sp.
           Fw109-5]
 gi|152028864|gb|ABS26632.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Anaeromyxobacter sp. Fw109-5]
          Length = 735

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 65/190 (34%), Gaps = 44/190 (23%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-- 323
           S +G+R   ++       ++ +D  S A+  +     + I   +SPD   + + +DR+  
Sbjct: 117 SPDGRRIAFAI----GGRLWLLDRASGASAPVPGAAGV-IDPRFSPDGRALAYVADRDLH 171

Query: 324 ----------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                        +      +    + ++Q++   +    WSP G  +A+ +        
Sbjct: 172 VRDLATGRTRRLTRARAASISNGLAEFVAQEEMDRHEGYWWSPDGRHLAYAE-------- 223

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             + +   + R L + +  + P        + + R    +   +L  +            
Sbjct: 224 --VDESPVERRALCDPARPERPC-----AQVAYPRAGTANAAVRLAVV------------ 264

Query: 434 PAYASDPQWV 443
           PA    P W+
Sbjct: 265 PAAGGRPVWI 274



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 57/147 (38%), Gaps = 27/147 (18%)

Query: 267 SNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +G+ AL   S  +     ++  DL+S AT  + +   + + A+  P +++         
Sbjct: 48  PDGRTALFLRSGPRAGVQSLFETDLRSGATREVVSPAAL-VGAALEPTAAEAA------- 99

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                       +++R+       Y     SP G  IAF    G +  + ++ +      
Sbjct: 100 ----------RLERQRVLARGVTHY---APSPDGRRIAFA--IGGR--LWLLDRASGASA 142

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            +   + +  P +SP GR+L +   +D
Sbjct: 143 PVPGAAGVIDPRFSPDGRALAYVADRD 169



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/252 (13%), Positives = 75/252 (29%), Gaps = 61/252 (24%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +++A+A        R++L+D     +    G     ++ PRFS +G+       +D
Sbjct: 117 SPDGRRIAFAI-----GGRLWLLDRASGASAPVPGAAG--VIDPRFSPDGRALAYVADRD 169

Query: 280 ------------EAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVF-------- 318
                             +  + +   E +            +SPD   + +        
Sbjct: 170 LHVRDLATGRTRRLTRARAASISNGLAEFVAQEEMDRHEGYWWSPDGRHLAYAEVDESPV 229

Query: 319 ------------------ESDREGKE----QLYVMQSNGSDQKRISQDKEA--SYFDPVW 354
                                R G      +L V+ + G     I  D+ A        W
Sbjct: 230 ERRALCDPARPERPCAQVAYPRAGTANAAVRLAVVPAAGGRPVWIRWDRRAFPYLATVRW 289

Query: 355 SPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-------QAPTWSPSGRSLIF 406
              G L +     +  +  +          R+L+ + +          P +   G    +
Sbjct: 290 ERGGPLALVVQNRAQTEVRLLAADPSSGATRVLLAERDDAWVELFQDFPRFRVDGSF-YW 348

Query: 407 SRKKDGDTGSKL 418
           + +++G    +L
Sbjct: 349 ATERNGAPEVEL 360



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 40/137 (29%), Gaps = 28/137 (20%)

Query: 310 SPDSSQIVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            PD    +F     R G + L+         + +     A+       P     A  +  
Sbjct: 47  DPDGRTALFLRSGPRAGVQSLFETDLRSGATREV--VSPAALVGAALEPTAAEAARLERQ 104

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                           R+L       AP  SP GR + F+       G +L+ +D     
Sbjct: 105 ----------------RVLARGVTHYAP--SPDGRRIAFA------IGGRLWLLDRASGA 140

Query: 428 ETLINTPAYASDPQWVG 444
              +   A   DP++  
Sbjct: 141 SAPVPGAAGVIDPRFSP 157


>gi|326674588|ref|XP_001921656.3| PREDICTED: WD repeat-containing protein 26-like, partial [Danio
           rerio]
          Length = 474

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/209 (13%), Positives = 71/209 (33%), Gaps = 27/209 (12%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  +   +D   +        +  K++          
Sbjct: 158 QQILTEHCNEVWFCKFSNDGTKLASGS---KDTTVIIWQVDPDSQQLKQLKTLEGHAYGV 214

Query: 264 ---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVF 318
               +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V 
Sbjct: 215 SYLAWSPDDTYLIACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVT 273

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAI 373
              R    Q Y    +G+    +    E      +W    G  +  +    +  G  F  
Sbjct: 274 GGQRG---QFYQCDLDGN----LLDSWEGVRVQCLWCLGDGRTVLASDTHQRIRGYNFE- 325

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                D +   ++ ED  + + T S +GR
Sbjct: 326 -----DLTDRNIVQEDHPIMSFTVSKNGR 349


>gi|296116088|ref|ZP_06834707.1| dipeptidyl peptidase IV [Gluconacetobacter hansenii ATCC 23769]
 gi|295977345|gb|EFG84104.1| dipeptidyl peptidase IV [Gluconacetobacter hansenii ATCC 23769]
          Length = 735

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 82/247 (33%), Gaps = 70/247 (28%)

Query: 244 TRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            R++   + + +       APR S +G+   +    D    ++ + L++    R+T    
Sbjct: 130 LRVNLTNQEVTSLPGDDWGAPRLSPDGRHVAVIKDND----VHVIALETGKVHRVTRGGT 185

Query: 303 INI-----------------SASYSPDSSQIVF-ESDREGKEQLYVMQSN---------- 334
            ++                    +SPDS  +V+ E+D  G E+ Y+              
Sbjct: 186 ADLTHGVAEFAAAEELDRHEGMWWSPDSRFLVYEEADLSGVEKHYIADPENPATPPVAFR 245

Query: 335 -------------------GSDQKRISQDKEASYF--DPVWSPQG---DLIAFTKFSGEK 370
                              G   + I  D+E   +    VWS +     ++   +   E+
Sbjct: 246 YPKAGTPNAKVRLGIIRRTGGHTRWIRWDQERYPYVVRVVWSKETGHLSMVVMDRAQDEE 305

Query: 371 FAIGVMKKDGSQERLLVE-------------DSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             + V  + G  + LL E              + L  P W   G+  +++ ++ G    +
Sbjct: 306 HVLDVDPRTGQTKELLSEHDAAWVNIAPTARTTGLPLPYWMHDGQHFLWASERSGRWQLE 365

Query: 418 LYSIDLN 424
           +   D +
Sbjct: 366 MRHADGS 372



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 79/274 (28%), Gaps = 53/274 (19%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--FSP 221
             I   +      + F      +   K  L ++ R G + R++   +++  +  R  +S 
Sbjct: 229 HYIADPENPATPPVAFRYPKAGTPNAKVRLGIIRRTGGHTRWIRWDQERYPYVVRVVWSK 288

Query: 222 NQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQK 278
               ++    D  +D   V  +D R  +  + +    +  + +AP   + G         
Sbjct: 289 ETGHLSMVVMDRAQDEEHVLDVDPRTGQTKELLSEHDAAWVNIAPTARTTG--------- 339

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                   + L                   +  D    ++ S+R G+ QL +  ++GS  
Sbjct: 340 --------LPL-----------------PYWMHDGQHFLWASERSGRWQLEMRHADGSMD 374

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             ++                  I FT        A+            L   + L    +
Sbjct: 375 HVVTPSALPFASLDDVDATRHTITFTATPDRMGTAVYRADLATGAVTPLATAAGLHQVNF 434

Query: 398 -------------SPSGRSLIFSRKKDGDTGSKL 418
                        +  G   +  R +DG+    L
Sbjct: 435 TAGHHDGFIDRFNAADGSLSVLLRGRDGEVTGVL 468


>gi|291000730|ref|XP_002682932.1| hypothetical protein NAEGRDRAFT_77945 [Naegleria gruberi]
 gi|284096560|gb|EFC50188.1| hypothetical protein NAEGRDRAFT_77945 [Naegleria gruberi]
          Length = 697

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 78/215 (36%), Gaps = 17/215 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           S  ++ + G   + +  +    +   R+S      A  T  ++ +LR++   +R  +   
Sbjct: 27  SFRLVSKTGRIEKTVANAHKGAVVTIRWSYEGN--ALVTAGEDGVLRIW---SRGGQLRS 81

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            + +    + +  +  + +  L +      + I  + + S    +        +   ++P
Sbjct: 82  TLASVGKSVYSVTWGPSSEEVLFT--NGRELVIKPIHVASKQI-QWKAHDSQILKVDWNP 138

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            ++ IV      G++  Y +  N       S   + S     WSP G+L A   F+    
Sbjct: 139 LTNMIV----SGGEDGKYKVWDNFGRLLYTSTPFDYSITSVSWSPNGELFAVGSFN---- 190

Query: 372 AIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLI 405
            + +  K G +  R      ++   +W+  G  + 
Sbjct: 191 TLKICDKSGWTISRNTTNTGSITDISWTSDGTQIA 225


>gi|225874209|ref|YP_002755668.1| dipeptidyl peptidase IV [Acidobacterium capsulatum ATCC 51196]
 gi|225794250|gb|ACO34340.1| dipeptidyl peptidase IV [Acidobacterium capsulatum ATCC 51196]
          Length = 752

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 58/179 (32%), Gaps = 46/179 (25%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVD-------LQSNATERLTN---------TLFINISAS 308
           ++ + K+    +     +  + V        + S   E L N                  
Sbjct: 56  WAPDSKQVTY-LDGSGNLREFVVGGASARKIIASKELEPLLNAPISEQDRDHRNRYDEPD 114

Query: 309 --YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             ++PDS  ++F    +   +L++  +     +++      S  DP +SP G  I++ + 
Sbjct: 115 YIWAPDSKHLLF----DTNGELWLFSTAKGKGRKVGNTGMQSGDDPKFSPNGQYISYIRN 170

Query: 367 SGEKFAIGVMK-KDGSQERLLVEDSN------------------LQAPTWSPSGRSLIF 406
           +     + V   +D SQ R L    +                       WSP  + + F
Sbjct: 171 N----NVYVQPEQDASQARALTNSGSKTVLNGGIDWVYLEELDVRSNYFWSPDSKQIAF 225



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 25/191 (13%), Positives = 59/191 (30%), Gaps = 45/191 (23%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-------------- 264
           ++P+ ++V Y   D    LR +++     R          ++ AP               
Sbjct: 56  WAPDSKQVTY--LDGSGNLREFVVGGASARKIIASKELEPLLNAPISEQDRDHRNRYDEP 113

Query: 265 ---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES 320
              ++ + K  L     D   +++          ++ N  +       +SP+   I +  
Sbjct: 114 DYIWAPDSKHLLF----DTNGELWLFSTAKGKGRKVGNTGMQSGDDPKFSPNGQYISYIR 169

Query: 321 DREGKEQLYVMQ-SNGSDQKRISQDKEASY----------------FDPVWSPQGDLIAF 363
                  +YV    + S  + ++     +                  +  WSP    IAF
Sbjct: 170 ----NNNVYVQPEQDASQARALTNSGSKTVLNGGIDWVYLEELDVRSNYFWSPDSKQIAF 225

Query: 364 TKFSGEKFAIG 374
            + + ++  + 
Sbjct: 226 LQMNEDRVPLY 236



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 28/124 (22%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-----------------SQDKEASYFD 351
           ++PDS Q+ +    +G   L      G+  ++I                  +D    Y +
Sbjct: 56  WAPDSKQVTYL---DGSGNLREFVVGGASARKIIASKELEPLLNAPISEQDRDHRNRYDE 112

Query: 352 PV--WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFS 407
           P   W+P    + F         + +      + R +      +   P +SP+G+ + + 
Sbjct: 113 PDYIWAPDSKHLLF----DTNGELWLFSTAKGKGRKVGNTGMQSGDDPKFSPNGQYISYI 168

Query: 408 RKKD 411
           R  +
Sbjct: 169 RNNN 172



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 27/235 (11%), Positives = 77/235 (32%), Gaps = 21/235 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ +++A+   +++ +    + D     A  +          P     G R  +    
Sbjct: 216 WSPDSKQIAFLQMNEDRVPLYPIEDWLPVHARIQWWQRYPQPGDPN--P-GVRVGVVKAA 272

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSP--DSSQ----IVFESDREGKEQLYVMQ 332
              +    + L +     +    ++N    +    D +Q    I F     G+ +L + Q
Sbjct: 273 GGPVSWLKIPLDTGNG-YIPRFGWVNDHIVWVETLDRAQKHENIYFADTHTGQVKLALAQ 331

Query: 333 SN---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +     +    ++   +  +    W      I    F          K +       VE 
Sbjct: 332 TEPKYFNTTYGVTFVGDHQFLLLSWRDGHTHIYRYSFDAADPMAAPAKLENE-----VEH 386

Query: 390 SNLQAPTW-SPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            + +  +  S      ++ +   +      ++++++L+G  +  ++      +P+
Sbjct: 387 GDYEVMSIGSVDKATGTIYYVSNEGNPRAHQVWAVNLDGSGKRRVSQTGGVHEPK 441


>gi|188579645|ref|YP_001923090.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Methylobacterium populi BJ001]
 gi|179343143|gb|ACB78555.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Methylobacterium populi BJ001]
          Length = 626

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 34/97 (35%), Gaps = 4/97 (4%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIG---VMKKDGSQERLLVEDSNLQAPTWSPSG 401
              + +    SP G  + +         I    +   D +          + A  ++  G
Sbjct: 12  GNPTRYGHQISPDGRRLGWVAPYEGVLNIWSAPIDDLDAAAPVTTDRRRGIDAYAFAYDG 71

Query: 402 RSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYA 437
           R L++ +  DGD    LY++DL  G    L   P  A
Sbjct: 72  RHLLYVQDADGDENHHLYAVDLTTGERRDLTPIPGIA 108



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 12/182 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNT--LFINISASYSPDSSQIVFESDR 322
           S +G+R       +  ++I+S  +   +A   +T      I+  A ++ D   +++  D 
Sbjct: 22  SPDGRRLGWVAPYEGVLNIWSAPIDDLDAAAPVTTDRRRGIDAYA-FAYDGRHLLYVQDA 80

Query: 323 EG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIGVMK 377
           +G     LY +     +++ ++     +      S       L+A          I  + 
Sbjct: 81  DGDENHHLYAVDLTTGERRDLTPIPGIAAAIVGLSRIVRDRVLVAINDRDPRFHDIHSVD 140

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                  L+VE+       +    R  + F+ +   D  S+L + D       L   P  
Sbjct: 141 LATGARSLVVENPGFAG--FLIDERYAVRFAFRNLPDGSSQLIARDGANWKPWLTFPPED 198

Query: 437 AS 438
           A 
Sbjct: 199 AR 200


>gi|156394489|ref|XP_001636858.1| predicted protein [Nematostella vectensis]
 gi|156223965|gb|EDO44795.1| predicted protein [Nematostella vectensis]
          Length = 273

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 79/243 (32%), Gaps = 22/243 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ V D     +          +   R SP+   +A ++ D    +R++     
Sbjct: 5   SGSEDCTIRVWDSKTGALLAQLDGHAGAVTCVRVSPDGGVIASSSAD--KTIRLW---NP 59

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
            D   + +      + +  FS NGKR + SV  D+ + ++  D++S    + LT      
Sbjct: 60  SDEFLRSLEGHEDRVTSLAFSKNGKRLV-SVALDKKLKVW--DVESGNLLDTLTGHDGYP 116

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNG------SDQKRISQDKEASYFDPVWSPQG 358
           +   +SPD   +           + +   +            +         D  +S  G
Sbjct: 117 VCLDFSPDGMLLAST---GADSNVIIWDISTARCYMQGTIIALLGGHSDWVMDVAFSSDG 173

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            L+  +        +         ++         +  +S  G  L  +     D   +L
Sbjct: 174 ALLT-SGSRDRTVRVWDCAAAEKLKKARFHSERCWSVAYSDDGMWLASASD---DFKVRL 229

Query: 419 YSI 421
           +++
Sbjct: 230 WAV 232


>gi|115936782|ref|XP_001193936.1| PREDICTED: similar to WD repeat domain 51B [Strongylocentrotus
           purpuratus]
          Length = 645

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 62/177 (35%), Gaps = 9/177 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG + + L V +       +        +    FSP+   VA ++ D      V L    
Sbjct: 66  SGAMDSCLMVWNFKAQMRAFRFVGHKDAVLSVNFSPSGHLVASSSRDK----TVRLWIPS 121

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           +           + + + +FS++G+  L +   D+ + +++V  Q      LT       
Sbjct: 122 VKGESTVYKAHTATVRSVQFSNDGQHLL-TASDDKTVKVWTVHRQ-RFQFSLTQHSNWVR 179

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            A +SPD   IV  SD    + + V      +      +         + P G  IA
Sbjct: 180 CAKWSPDGRLIVSCSD---DKTVKVWDRTSKECIHTFFEHGGFAHSVAFHPSGTCIA 233



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 68/185 (36%), Gaps = 11/185 (5%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDE 280
           + +A+     +    + +     D   +R  N++     I    F+ N K+   S   D 
Sbjct: 15  RSLAHGHQQPDQCSVIAMASVLEDPTLER--NYKGHRDTITCVDFNPNMKQLA-SGAMDS 71

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + +++   Q     R        +S ++SP    +V  S R+   +L++    G     
Sbjct: 72  CLMVWNFKAQ-MRAFRFVGHKDAVLSVNFSPSG-HLVASSSRDKTVRLWIPSVKGEST-- 127

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           + +   A+     +S  G  +  T    +   +  + +   Q  L    + ++   WSP 
Sbjct: 128 VYKAHTATVRSVQFSNDGQHLL-TASDDKTVKVWTVHRQRFQFSLTQHSNWVRCAKWSPD 186

Query: 401 GRSLI 405
           GR ++
Sbjct: 187 GRLIV 191



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 49/138 (35%), Gaps = 11/138 (7%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKF 366
           ++P+  Q+       G     +M  N   Q R  +    + +     +SP G L+A +  
Sbjct: 57  FNPNMKQLA-----SGAMDSCLMVWNFKAQMRAFRFVGHKDAVLSVNFSPSGHLVA-SSS 110

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             +   + +    G         + +++  +S  G+ L+ +     D   K++++     
Sbjct: 111 RDKTVRLWIPSVKGESTVYKAHTATVRSVQFSNDGQHLLTASD---DKTVKVWTVHRQRF 167

Query: 427 NETLINTPAYASDPQWVG 444
             +L     +    +W  
Sbjct: 168 QFSLTQHSNWVRCAKWSP 185


>gi|115767186|ref|XP_797493.2| PREDICTED: similar to WD repeat domain 51B [Strongylocentrotus
           purpuratus]
          Length = 279

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 62/177 (35%), Gaps = 9/177 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG + + L V +       +        +    FSP+   VA ++ D      V L    
Sbjct: 66  SGAMDSCLMVWNFKAQMRAFRFVGHKDAVLSVNFSPSGHLVASSSRDK----TVRLWIPS 121

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           +           + + + +FS++G+  L +   D+ + +++V  Q      LT       
Sbjct: 122 VKGESTVYKAHTATVRSVQFSNDGQHLL-TASDDKTVKVWTVHRQ-RFQFSLTQHSNWVR 179

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            A +SPD   IV  SD    + + V      +      +         + P G  IA
Sbjct: 180 CAKWSPDGRLIVSCSD---DKTVKVWDRTSKECIHTFFEHGGFAHSVAFHPSGTCIA 233



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 68/185 (36%), Gaps = 11/185 (5%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDE 280
           + +A+     +    + +     D   +R  N++     I    F+ N K+   S   D 
Sbjct: 15  RSLAHGHQQPDQCSVIAMASVLEDPTLER--NYKGHRDTITCVDFNPNMKQLA-SGAMDS 71

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + +++   Q     R        +S ++SP    +V  S R+   +L++    G     
Sbjct: 72  CLMVWNFKAQ-MRAFRFVGHKDAVLSVNFSPSG-HLVASSSRDKTVRLWIPSVKGEST-- 127

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           + +   A+     +S  G  +  T    +   +  + +   Q  L    + ++   WSP 
Sbjct: 128 VYKAHTATVRSVQFSNDGQHLL-TASDDKTVKVWTVHRQRFQFSLTQHSNWVRCAKWSPD 186

Query: 401 GRSLI 405
           GR ++
Sbjct: 187 GRLIV 191



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 49/138 (35%), Gaps = 11/138 (7%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKF 366
           ++P+  Q+       G     +M  N   Q R  +    + +     +SP G L+A +  
Sbjct: 57  FNPNMKQLA-----SGAMDSCLMVWNFKAQMRAFRFVGHKDAVLSVNFSPSGHLVA-SSS 110

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             +   + +    G         + +++  +S  G+ L+ +     D   K++++     
Sbjct: 111 RDKTVRLWIPSVKGESTVYKAHTATVRSVQFSNDGQHLLTASD---DKTVKVWTVHRQRF 167

Query: 427 NETLINTPAYASDPQWVG 444
             +L     +    +W  
Sbjct: 168 QFSLTQHSNWVRCAKWSP 185


>gi|21244763|ref|NP_644345.1| dipeptidyl peptidase IV [Xanthomonas axonopodis pv. citri str. 306]
 gi|21110459|gb|AAM38881.1| dipeptidyl peptidase IV [Xanthomonas axonopodis pv. citri str. 306]
          Length = 757

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 91/279 (32%), Gaps = 69/279 (24%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+   + +        L +Y +      A +++ +  +     + S  G       ++
Sbjct: 125 WAPDAHALLFP---LGGELYLYDLRKTGAAAVRKLTHGENFATDAKLSPKGGFVSFVRER 181

Query: 279 DEAMDIYSVDLQSNATERLTNTLFI-----------------NISASYSPDSSQIVFE-- 319
           +    ++ ++L S    +LT                      +    ++PD S I F   
Sbjct: 182 N----LWVIELASGNALQLTQDGSETIGNGVAEFVADEEMERHTGYWWAPDDSAIAFARI 237

Query: 320 ---------------------SDR---EGKE----QLYVMQSNGSDQKR---ISQDKEAS 348
                                S R    G+     QL V+        R   + ++ +  
Sbjct: 238 DEAQVPVQKRPEVYADHTEVISQRYPQAGQPNVAVQLGVIAPRAKATPRWIDLGKNPDIY 297

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMK---KDGSQERLLVEDSNLQAP-----TWSPS 400
                W      + F + S ++  + +++     G+Q  L+ E S    P      +   
Sbjct: 298 LARVDW-RDAQRLTFQRQSRDQKTLELIETTLASGAQRTLITETSPTWVPLSNDLRFLKD 356

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           GR L ++ ++ G   + LY    +GR  T + +  +  D
Sbjct: 357 GRFL-WNSERSG--YAHLYLASDDGRTLTPLTSGNWVVD 392



 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 73/220 (33%), Gaps = 42/220 (19%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P     L +PR +P+  +V +    D D  ++ L +  I     R+     ++L     
Sbjct: 41  LPLSGPTLMKPRVAPDGSRVTFLRGKDSDRNQLDLWEYDIASGQTRLLVDSKVVL----- 95

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                            +  V+      +R+     I +   ++PD+  ++F     G+ 
Sbjct: 96  ------------PGTEVLSDVEKARRERQRIAAFTGI-VDYQWAPDAHALLFPL--GGEL 140

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            LY ++  G+   R     E    D   SP+G  ++F +       + V++        L
Sbjct: 141 YLYDLRKTGAAAVRKLTHGENFATDAKLSPKGGFVSFVRER----NLWVIELASGNALQL 196

Query: 387 VEDS------------------NLQAPTWSPSGRSLIFSR 408
            +D                         W+P   ++ F+R
Sbjct: 197 TQDGSETIGNGVAEFVADEEMERHTGYWWAPDDSAIAFAR 236


>gi|158314127|ref|YP_001506635.1| peptidase S9 prolyl oligopeptidase [Frankia sp. EAN1pec]
 gi|158109532|gb|ABW11729.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Frankia sp. EAN1pec]
          Length = 776

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             S  PD S I F  D  G+  L+V  ++G++  R+     A     +WSP G  IA T 
Sbjct: 71  GPSPGPDGS-IAFVGDATGRPALWVRAADGTE--RVLDTGPAHVRSALWSPDGAWIAITV 127

Query: 366 FSGEKFA--IGVMKKDGS 381
             G      + +++ DG 
Sbjct: 128 APGGGEHTEVHLVRPDGR 145



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 1/84 (1%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                S   P   P G  IAF   +  + A+ V   DG++  L    +++++  WSP G 
Sbjct: 63  WATPPSVRGPSPGPDGS-IAFVGDATGRPALWVRAADGTERVLDTGPAHVRSALWSPDGA 121

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR 426
            +  +    G   ++++ +  +GR
Sbjct: 122 WIAITVAPGGGEHTEVHLVRPDGR 145



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/149 (12%), Positives = 36/149 (24%), Gaps = 29/149 (19%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +  P   P+   +A+            L     D   + +    + + +  +S +G  
Sbjct: 67  PSVRGPSPGPDGS-IAFVGDATGRPA---LWVRAADGTERVLDTGPAHVRSALWSPDGAW 122

Query: 272 ALISVQKDEAMDIYS--------------VDLQSNATERLTNTLFINISA---------- 307
             I+V                        V     A  RL   +    +           
Sbjct: 123 IAITVAPGGGEHTEVHLVRPDGRVRPDGRVRPDGTAAHRLAGGVRPGTAGAVEACAATVS 182

Query: 308 SYSPDSSQIVFE-SDREGKEQLYVMQSNG 335
            ++     +V   S R G      +   G
Sbjct: 183 RWAAGGRLLVVTESARSGLTHAVAVDPAG 211


>gi|296123273|ref|YP_003631051.1| dipeptidyl-peptidase IV [Planctomyces limnophilus DSM 3776]
 gi|296015613|gb|ADG68852.1| Dipeptidyl-peptidase IV [Planctomyces limnophilus DSM 3776]
          Length = 783

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 63/178 (35%), Gaps = 18/178 (10%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERL---- 297
                   +  +  SM     +S +G+       +       I +VD+++     +    
Sbjct: 316 LDSTLFTNQFTSSPSMNFH--WSEDGREFYFDFNQRGHQCYRILAVDVKTGQVRPVVEEV 373

Query: 298 --TNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPV 353
             T   + N+S   + P + +++ +S+R+G   L+    +G    ++++           
Sbjct: 374 SPTFVDYRNLSWRHWLPKTKELLCKSERDGWSHLWKFDVSGQKSPQQLTSGPWVVREIQR 433

Query: 354 WSPQGDLIAFT----KFSGEKFAIGV--MKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                + I FT    +   + + + +  +  DG+  + L +        +SP     +
Sbjct: 434 VDEASNTIWFTANGLRPEEDPYHLYLCKVSFDGTGFQQLTQGDGTHEIQFSPQSTYFV 491



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 74/205 (36%), Gaps = 30/205 (14%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L+D    +AP+   + R    A  FS +GK       +     +   + +     R++  
Sbjct: 181 LIDGISGKAPRNSPSRRPRSSAQGFSPDGKWFA----RGSGNQVILTNGEMQDEVRISPP 236

Query: 301 LFINI----SASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQ-----KRISQDKEASYF 350
           +  +     +AS+SP+S   VF S    K  Q+ +++++  DQ     ++++  K     
Sbjct: 237 IPADAKIFGTASWSPNSEAFVFSSAIPVKVRQISIVETSPKDQLQPKVRQLNYAKPGDEL 296

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIF 406
           D             +     F   V+         L  +    +P+    WS  GR   F
Sbjct: 297 DQPVP------VLFRLENGSFKPVVLDST------LFTNQFTSSPSMNFHWSEDGREFYF 344

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLI 431
              + G    ++ ++D+       +
Sbjct: 345 DFNQRGHQCYRILAVDVKTGQVRPV 369


>gi|51893620|ref|YP_076311.1| hypothetical protein STH2482 [Symbiobacterium thermophilum IAM
           14863]
 gi|51857309|dbj|BAD41467.1| conserved domain protein [Symbiobacterium thermophilum IAM 14863]
          Length = 602

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 71/221 (32%), Gaps = 29/221 (13%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---------IYSVDLQSNATE 295
           +    P        M  A  FS +G+ A        A           +  VDL++    
Sbjct: 376 KTGGEPPLSALAAGMPEAVAFSPDGRAAAYVGPAPGAGAGGAEPAPSPLVLVDLRTGTVR 435

Query: 296 RL-----TNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-- 345
            +     T       +A   ++SPD +++       G     V+  +     R +  +  
Sbjct: 436 TIPGFVETGGPSGEGAALEVAWSPDGNRLAALEPVTGARGSRVVVYDLERDARTTAAELP 495

Query: 346 -EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             A      WSP+GD +      G      ++  +G     + +  + QA  W  +G  +
Sbjct: 496 VHAWQARLAWSPRGDRLLAYGGGGGT---WIIDPEGGDAVHVADSGHAQA-FWDRTGERI 551

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINT--PAYASDPQWV 443
           + +R   G           +G    L +     +A D  ++
Sbjct: 552 LAAR---GPWDGVFVHTLADGTRVELGDGLPAGWAGDAVYI 589



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 80/261 (30%), Gaps = 33/261 (12%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D        S  +Q  A      +     + ++T  +   +   + R+++ A       +
Sbjct: 205 DADSLTSWLSGVRQCTALPVALAQGTGDRWWIETE-EAPVRLYLDLRTVVAAGSGLPVAR 263

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--- 327
             L    +     +  VDL +   E L         A  SPD ++I   S R   +Q   
Sbjct: 264 YPLTVWSEAGLPYLERVDLATGRAEELLRLPPEIREAWPSPDGARIALRSWRSHGDQWRD 323

Query: 328 --LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER- 384
             + V+   G+     +    + ++       G L+        + A  +   D  ++  
Sbjct: 324 DRVSVVDLTGNQVIGTTLQGGSLHWVG-----GRLVNRVPGGSAEGAWELWDPDTGEKTG 378

Query: 385 -----LLVEDSNLQAPTWSPSGRSLIFS-------RKKDGDTGSKLYSIDL-NGRNETL- 430
                  +     +A  +SP GR+  +                S L  +DL  G   T+ 
Sbjct: 379 GEPPLSALAAGMPEAVAFSPDGRAAAYVGPAPGAGAGGAEPAPSPLVLVDLRTGTVRTIP 438

Query: 431 --INTPAYASDP-----QWVG 444
             + T   + +       W  
Sbjct: 439 GFVETGGPSGEGAALEVAWSP 459



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 43/148 (29%), Gaps = 9/148 (6%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--F 265
           PS +    E  +SP+  ++A             ++      A              R  +
Sbjct: 446 PSGEGAALEVAWSPDGNRLAALEPVTGARGSRVVVYDLERDARTTAAELPVHAWQARLAW 505

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S  G R    +        + +D +      + ++   +  A +     +I+  + R   
Sbjct: 506 SPRGDRL---LAYGGGGGTWIIDPEGGDAVHVADSG--HAQAFWDRTGERIL--AARGPW 558

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPV 353
           + ++V       +  +     A +    
Sbjct: 559 DGVFVHTLADGTRVELGDGLPAGWAGDA 586


>gi|325290583|ref|YP_004266764.1| cell wall binding repeat 2-containing protein [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324965984|gb|ADY56763.1| cell wall binding repeat 2-containing protein [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 607

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 50/280 (17%), Positives = 111/280 (39%), Gaps = 33/280 (11%)

Query: 175 SRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + + FV+         N  L  +  DG+  + L+      +           V YA   D
Sbjct: 334 TNMGFVAVQGDWIYYHNDALYKVKADGSGKQELSKDIPGFINV-----AGDWVYYADAAD 388

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +  L +Y + T    +  ++ + +SM +        +  +  +   ++ ++Y +     A
Sbjct: 389 QK-LNMYKIKTD-GTSRTKLSDDQSMYIVVA-----ENWIYYMNASDSGNLYKIKTDGTA 441

Query: 294 TERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             +LT+   + IS S       + + + +  G+ +L+ ++++G+    + +     + + 
Sbjct: 442 KTKLTDEPALEISVS----GDWVYYTTINTSGQGELHKIKTDGTGSAIVYEGGSMMFLNV 497

Query: 353 VWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
                GD + F     SGE  A+  +KK+G+   ++ +D          +G  + +S   
Sbjct: 498 A----GDDLYFEVADSSGENTALAKVKKEGTDYAVVTDDQAEFLNV---AGDWIYYSNAS 550

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAY---ASDPQWVGFMD 447
           D +   KLY I  +G N+T I+            WV + +
Sbjct: 551 DEN---KLYKIKTDGTNKTKISDETALFIQVAGDWVYYAN 587



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 68/175 (38%), Gaps = 29/175 (16%)

Query: 284 IYSVDLQSNA----TERLTNTLFINISASYSP------DSSQIVFESDREGKEQLYVMQS 333
           I  + +        +  LT+ ++ N S + +           I + +D      LY +++
Sbjct: 304 INEISILGGQGAVSSTVLTDNVYGNTSGNITNMGFVAVQGDWIYYHND-----ALYKVKA 358

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +GS ++ +S+D             GD + +   + +K  +  +K DG+    L +D ++ 
Sbjct: 359 DGSGKQELSKDIPGFINVA-----GDWVYYADAADQKLNMYKIKTDGTSRTKLSDDQSMY 413

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPA--YASDPQWVGF 445
                 +   + +    D      LY I  +G  +T L + PA   +    WV +
Sbjct: 414 IVV---AENWIYYMNASD---SGNLYKIKTDGTAKTKLTDEPALEISVSGDWVYY 462


>gi|150397966|ref|YP_001328433.1| WD-40 repeat-containing protein [Sinorhizobium medicae WSM419]
 gi|150029481|gb|ABR61598.1| WD-40 repeat protein [Sinorhizobium medicae WSM419]
          Length = 329

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 54/286 (18%), Positives = 97/286 (33%), Gaps = 37/286 (12%)

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R  AH  +  +  +       + +++    +  V+     +  V   DG    +     
Sbjct: 70  MRISAHGTASLVADTGRK----WIAQVAAGPQGAVAYAYGKTTHVRLFDGTTREFPEQRT 125

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            + L    F+P   ++A A Y+      V L    +   P  +  ++       FS +G+
Sbjct: 126 VEGL---AFAPKGLRIAAARYNG-----VSLHWVAMSGQPVDL-EWKGAHTGVTFSPDGR 176

Query: 271 RALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQ 327
             + ++Q++ A+  + +D +  A  R   +T       S S+S     +       G   
Sbjct: 177 FVVTAMQEN-ALHGWKLDAKPGAEARHMRMTGYPAKVKSLSWSAKGKWLA----SSGAPA 231

Query: 328 LYVMQSNGSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             V    G D         +           V  P  D++A     G    I   +   S
Sbjct: 232 AIVWPFQGKDGPMGKAPLELGTRANIMVTTVVCHPAEDIVAIGYEDG---MILAARLADS 288

Query: 382 QERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +E LL       + A  WS +GR L F     GD G     +D+ G
Sbjct: 289 KEVLLRRPGKGAITAMAWSKNGRQLAFGS-AAGDCG----VVDIAG 329



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 68/188 (36%), Gaps = 25/188 (13%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISASY------SPDSSQIV 317
           +G   L+S   DEA D      +     R+    T +L  +    +       P  + + 
Sbjct: 46  DG---LLSFVVDEANDTLLTGGEDGKVMRISAHGTASLVADTGRKWIAQVAAGPQGA-VA 101

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +   +    +L+    +G+ ++     ++ +     ++P+G  IA  +++G       M 
Sbjct: 102 YAYGKTTHVRLF----DGTTRE---FPEQRTVEGLAFAPKGLRIAAARYNGVSLHWVAMS 154

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL-YSIDLNGRNETLINTPAY 436
               Q   L         T+SP GR ++ + +++   G KL        R+  +   PA 
Sbjct: 155 ---GQPVDLEWKGAHTGVTFSPDGRFVVTAMQENALHGWKLDAKPGAEARHMRMTGYPAK 211

Query: 437 ASDPQWVG 444
                W  
Sbjct: 212 VKSLSWSA 219


>gi|254417299|ref|ZP_05031043.1| protein kinase domain [Microcoleus chthonoplastes PCC 7420]
 gi|196175952|gb|EDX70972.1| protein kinase domain [Microcoleus chthonoplastes PCC 7420]
          Length = 622

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 87/269 (32%), Gaps = 20/269 (7%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           IY  I       +  I    + + SG    ++ + +     + +      + +    FSP
Sbjct: 332 IYTLIGHSSSVCSVAISPDEQCLASGSFDKTVKLWNIQTGELLHTLIKHIKPVLSVAFSP 391

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N Q +A  + D  D + ++   +              + +    S +G+         + 
Sbjct: 392 NGQILASGSVD--DTIELWQWQSGFVSCTIADYFDARVSICLAISPDGQFLA---SGCDR 446

Query: 282 MDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             I   ++++            IN S ++SPD   +V  S  +   QL+ + +   +   
Sbjct: 447 QIIKVWEIETGTLLHTFYHLRGIN-SVTFSPDGQFLVSGSS-DNTVQLWCLDN--GELVN 502

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WS 398
                E         PQG ++A          I +      +    +        T  +S
Sbjct: 503 TFTGHERDVNSVAIDPQGKILASGSSDTT---IKLWHLGNGKLLATLRGHADWVRTVKFS 559

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            +GR L+      G   + +   DL+G  
Sbjct: 560 HNGRMLV-----SGSADTTIKVWDLHGGK 583


>gi|116253886|ref|YP_769724.1| hypothetical protein RL4149 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258534|emb|CAK09638.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 329

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 91/263 (34%), Gaps = 24/263 (9%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            +D     I      + S++    +  V+     S  V   DG    +      + L   
Sbjct: 73  AADGSVSEIATAPRKWISQVAAGPQGAVAYSYGKSSLVRLADGTTKEFPEERTVEGL--- 129

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P   ++A A Y+      V L    ++  P  +  ++       FS +G   + S+Q
Sbjct: 130 AFAPKGLRIAAARYNG-----VSLHWIGMNAKPIDL-EWKGAHTGVTFSPDGNFLVTSMQ 183

Query: 278 KDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ A+  + +D++     R   +T       S S+S     +       G     V    
Sbjct: 184 EN-ALHGWKLDIKPGTEARHMRMTGYPSKVKSLSWSVKGKWLA----SSGAPAAIVWPFQ 238

Query: 335 GSD----QKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           G D    +  +     A+       + P  D++A     G   A+ +     +  R   +
Sbjct: 239 GKDGPMGKAPLELGTRANIMATAVKFHPLEDILAIGFIDGMILAVRIADSKEALLRRPGK 298

Query: 389 DSNLQAPTWSPSGRSLIFSRKKD 411
              + A +WS +G+ L F  +  
Sbjct: 299 -GAITAMSWSKNGKLLAFGSEAG 320



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 81/248 (32%), Gaps = 29/248 (11%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V    Q     +    +S  ++A   + +  +  T E   F  + L ++ +  +G+    
Sbjct: 92  VAAGPQ-GAVAYSYGKSSLVRLADGTTKEFPEERTVEGLAFAPKGLRIAAARYNGVS--- 147

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK- 251
              +   G N + +            FSP+   +   T   E+ L  + +D +     + 
Sbjct: 148 ---LHWIGMNAKPIDLEWKGAHTGVTFSPDGNFL--VTSMQENALHGWKLDIKPGTEARH 202

Query: 252 -RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-------TERLTNTLFI 303
            R+  + S + +  +S  GK    S     A        Q           E  T    +
Sbjct: 203 MRMTGYPSKVKSLSWSVKGKWLASS----GAPAAIVWPFQGKDGPMGKAPLELGTRANIM 258

Query: 304 NISASYSPDSSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +  + P    +   F         +  ++   S +  + +  + +     WS  G L+
Sbjct: 259 ATAVKFHPLEDILAIGFI-----DGMILAVRIADSKEALLRRPGKGAITAMSWSKNGKLL 313

Query: 362 AFTKFSGE 369
           AF   +G+
Sbjct: 314 AFGSEAGD 321


>gi|32476285|ref|NP_869279.1| serine/threonine-protein kinase pknB [Rhodopirellula baltica SH 1]
 gi|32446830|emb|CAD78736.1| probable serine/threonine-protein kinase pknB [Rhodopirellula
           baltica SH 1]
          Length = 1097

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 68/177 (38%), Gaps = 13/177 (7%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           ++A++   +D ++ ++ +D  + A   L        + S+SPD S  V  S       + 
Sbjct: 537 RKAVLCACEDGSVVMFPLDGSTTAGRSLGRHDEPVHAVSFSPDGSMAVSGSTSG---LIK 593

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVE 388
                 +      +  E       WSP G  +A    +G ++A + V   +G+++  L+ 
Sbjct: 594 YWDVEKTICIHQVRPVENGIESLAWSPDGRSVA----AGFRYAGVWVGDANGNEKFRLIN 649

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQWVG 444
           D   +   ++P  + L+   +     G  ++ +     + T+   P        W G
Sbjct: 650 DHRHETLLFTPDSQELLVPTRD----GIHVWDVSAARHDRTIETDPFTNVRAMCWAG 702



 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 91/261 (34%), Gaps = 31/261 (11%)

Query: 192 SLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           S+ +   DG+          D+ +    FSP+       +        +   D       
Sbjct: 548 SVVMFPLDGSTTAGRSLGRHDEPVHAVSFSPDGSMAVSGSTSG----LIKYWDVEKTICI 603

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            ++    + I +  +S +G+      +      ++  D   N   RL N         ++
Sbjct: 604 HQVRPVENGIESLAWSPDGRSVAAGFRYAG---VWVGDANGNEKFRLINDHRHET-LLFT 659

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWS-PQGDLIAFTKFSG 368
           PDS +++    R+G   ++V   + +   R I  D   +     W+ P    +     +G
Sbjct: 660 PDSQELL-VPTRDG---IHVWDVSAARHDRTIETDPFTNVRAMCWAGPNQQWLI----AG 711

Query: 369 EKF--AIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           E++  ++ V  ++    R    V  S  ++   S +G  L       G    ++  I L+
Sbjct: 712 ERYFDSLAVFDRETGARRGTFNVSASYAKSLAASSNGMWL-----TAGYGDGRIQIIRLH 766

Query: 425 GRNETLINTPAYASDPQWVGF 445
           G +E+ +         QW  +
Sbjct: 767 GTDESEVG--GEVRT-QWNAY 784



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 62/174 (35%), Gaps = 11/174 (6%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           ED   V         A + +G     + A  FS +G    +S      +  + V+     
Sbjct: 545 EDGSVVMFPLDGSTTAGRSLGRHDEPVHAVSFSPDG-SMAVSGSTSGLIKYWDVEKTICI 603

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            +       I  S ++SPD   +     R     ++V  +NG+++ R+  D        +
Sbjct: 604 HQVRPVENGIE-SLAWSPDGRSVA-AGFR--YAGVWVGDANGNEKFRLINDHRHETL--L 657

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWS-PSGRSLI 405
           ++P    +      G    +  +        +  +   N++A  W+ P+ + LI
Sbjct: 658 FTPDSQELLVPTRDG--IHVWDVSAARHDRTIETDPFTNVRAMCWAGPNQQWLI 709


>gi|115478100|ref|NP_001062645.1| Os09g0241100 [Oryza sativa Japonica Group]
 gi|113630878|dbj|BAF24559.1| Os09g0241100 [Oryza sativa Japonica Group]
          Length = 935

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 16/162 (9%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I  F   I +  F+  G     +   D    I ++D  +  ++ L          S+ P 
Sbjct: 218 IARFTLPIRSLAFNKKGTLLAAAGDDDGIKLIATID--NTISKVLKGHKGSVTGLSFDPR 275

Query: 313 SSQIVFESDREGKEQLY--VMQSNGSDQKRI--SQDKEASYFDP-VWSPQGDLIAFTKFS 367
           +  +    D  G    +     +     KRI  +   + S  +   WSP G  +A     
Sbjct: 276 NDYLA-SIDTFGTVIFWDLCTGTEARSLKRIAPTFGSDHSINNALCWSPDGQFLAV---P 331

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLI 405
           G +  + +  +D  +E +       + P     WSP+GR L+
Sbjct: 332 GLRNNVVMYDRDTGEE-VFTLKGEHEQPVCSLCWSPNGRYLV 372



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 78/256 (30%), Gaps = 39/256 (15%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM----DR 198
               +P S   +A    D   +  +  +G F S I   +  + S        ++    D 
Sbjct: 184 ALAVAPGSGASLASGSIDHSVKFCSFPEGVFQSNIARFTLPIRSLAFNKKGTLLAAAGDD 243

Query: 199 DG--------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           DG          I  +       +    F P    +A      +    V   D       
Sbjct: 244 DGIKLIATIDNTISKVLKGHKGSVTGLSFDPRNDYLA----SIDTFGTVIFWDLCTGTEA 299

Query: 251 KRI-------GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           + +       G+  S+  A  +S +G+   +   ++   ++   D  +     +      
Sbjct: 300 RSLKRIAPTFGSDHSINNALCWSPDGQFLAVPGLRN---NVVMYDRDTGEE--VFTLKGE 354

Query: 304 NISAS----YSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQG 358
           +        +SP+   +V        +Q+ +       D +R   D+        W P+ 
Sbjct: 355 HEQPVCSLCWSPNGRYLV---TAGLDKQVLIWDVKSKQDVERQKFDER--ICSLAWKPES 409

Query: 359 DLIAFTKFSGEKFAIG 374
           + +A    +G +F I 
Sbjct: 410 NAVAVIDVTG-RFGIW 424


>gi|307201725|gb|EFN81415.1| WD repeat-containing protein 51A [Harpegnathos saltator]
          Length = 461

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 85/282 (30%), Gaps = 30/282 (10%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            +L      K ++      S  ++R IAH  SD I        G+          +  S 
Sbjct: 31  IQLVSSSLDKTLLVWNLTESVRAYRFIAH--SDSILDVCYAPSGE--------VIASASK 80

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V    G +I +   S      +  FSP+ +K+  A+ D         +   + 
Sbjct: 81  DRSVRIWVPKVTGQSIDFKAHSFAVRSVQ--FSPDGEKLLTASDDKS-------VKLWMV 131

Query: 248 RAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              + + +F      +   +FS +G R L+S   D+   I+  D+ S    +      I 
Sbjct: 132 CQRRFLTSFNGHTNWVRCAKFSPDG-RLLVSCSDDKTTKIW--DISSGQCVK--TFSEIK 186

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +Y                  + +         +     +       + P+G+ +   
Sbjct: 187 APPAYVEFHPSGAAVGSANMDACVKLYDLRTGSLYQYYAAHKGPVNMIKFHPKGNFMLTA 246

Query: 365 KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
                   + +   +G     L      + + T+S  G    
Sbjct: 247 SSDSTMKVLDL--LEGRPIYTLKGHTGEITSITFSQDGDFFA 286



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 38/263 (14%), Positives = 91/263 (34%), Gaps = 28/263 (10%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           T  D  ++       D  + + F   ++  VS  +  +L V +   +   Y   +    +
Sbjct: 4   TACDPTFERHFKGHKDGVTALSFHPNAIQLVSSSLDKTLLVWNLTESVRAYRFIAHSDSI 63

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKR 271
            +  ++P+ + +A A+ D    +R+++             +F++   A R   FS +G++
Sbjct: 64  LDVCYAPSGEVIASASKD--RSVRIWVPKVTGQSI-----DFKAHSFAVRSVQFSPDGEK 116

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGKEQL 328
            L +   D+++ ++ V         LT+          A +SPD   +V  SD    +  
Sbjct: 117 LL-TASDDKSVKLWMV----CQRRFLTSFNGHTNWVRCAKFSPDGRLLVSCSD---DKTT 168

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--L 386
            +   +     +   + +A      + P G   A    +     + +             
Sbjct: 169 KIWDISSGQCVKTFSEIKAPPAYVEFHPSG---AAVGSANMDACVKLYDLRTGSLYQYYA 225

Query: 387 VEDSNLQAPTWSPSGRSLIFSRK 409
                +    + P G  ++ +  
Sbjct: 226 AHKGPVNMIKFHPKGNFMLTASS 248


>gi|151556994|gb|AAI49532.1| WD repeat and SOCS box-containing 2 [Bos taurus]
          Length = 406

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 83/216 (38%), Gaps = 23/216 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D+
Sbjct: 121 PDVSCLILATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDK 178

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 179 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 235

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----------- 389
             +  ++S     +SP   L+    +      I      G + R L              
Sbjct: 236 KLEGHQSSVVSCDFSPDSALLVTASYDTN--VIMWDPYTGERLRSLHHTQLNPPMDDSDV 293

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S+L++  +SP G   ++      D   ++++++L
Sbjct: 294 HISSLRSVCFSPEG---LYLATVADDRLLRIWALEL 326



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 37/278 (13%), Positives = 80/278 (28%), Gaps = 42/278 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT--------------------YDDEDILRVY 240
                         +   FSP+    A++                     ++ +      
Sbjct: 18  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSQSSKN 77

Query: 241 LMDTRIDRAPKRI---GNFRSMILAPRFSSNGKR---------------ALISVQKDEAM 282
               R     K +        +  +P  S   K+                L +   D  +
Sbjct: 78  ETKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSKKLWARHHPQVPDVSCLILATGLNDGQI 137

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 138 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 196

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 197 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 254

Query: 403 SLIFSRKKDGDTGSKLYS-IDLNGRNETLINTPAYASD 439
            L+ +           Y+   L   + T +N P   SD
Sbjct: 255 LLVTASYDTNVIMWDPYTGERLRSLHHTQLNPPMDDSD 292


>gi|256375875|ref|YP_003099535.1| hypothetical protein Amir_1741 [Actinosynnema mirum DSM 43827]
 gi|255920178|gb|ACU35689.1| hypothetical protein Amir_1741 [Actinosynnema mirum DSM 43827]
          Length = 319

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 62/172 (36%), Gaps = 14/172 (8%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G F++R  +        +        + +GA +     +   +        +     Y
Sbjct: 142 VPGGFSTRTGYYDVRTGKSVDSLEHFTAEVEGAVLTAQDANYWGLTVA-----DDDNTFY 196

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYS 286
           AT         Y    + D A +R+ + R     P  S +G +      + +    D+  
Sbjct: 197 ATLASGG----YTWLVKGDLAAERVVSQRRDAECPSISPDGTKVAYKKRIGRLGPWDLAV 252

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGS 336
           +DL S    RL  T  ++  A++  D  ++ F +  +  +   ++V+  +GS
Sbjct: 253 LDLASGEELRLPGTAGVDDQATWL-DGGRVAFAAVPKDAKLAAIHVVPVDGS 303



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 58/148 (39%), Gaps = 9/148 (6%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT         + + D +         G    ++++ + + ++ +SQ ++A    P  SP
Sbjct: 176 LTAQDANYWGLTVADDDNTFYATLASGGYT--WLVKGDLAAERVVSQRRDAE--CPSISP 231

Query: 357 QGDLIAFTKFSG--EKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            G  +A+ K  G    + + V+    G + RL          TW   G  + F+      
Sbjct: 232 DGTKVAYKKRIGRLGPWDLAVLDLASGEELRLPGTAGVDDQATWL-DGGRVAFAAVPKDA 290

Query: 414 TGSKLYSIDLNG-RNETLINTPAYASDP 440
             + ++ + ++G R+  ++   A +  P
Sbjct: 291 KLAAIHVVPVDGSRDAEILVRDATSPSP 318



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 48/123 (39%), Gaps = 3/123 (2%)

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           R GK    +       +  +   ++A+Y+    +   D   +   +   +   ++K D +
Sbjct: 156 RTGKSVDSLEHFTAEVEGAVLTAQDANYWGLTVADD-DNTFYATLASGGYT-WLVKGDLA 213

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDP 440
            ER++ +  + + P+ SP G  + + ++        L  +DL +G    L  T       
Sbjct: 214 AERVVSQRRDAECPSISPDGTKVAYKKRIGRLGPWDLAVLDLASGEELRLPGTAGVDDQA 273

Query: 441 QWV 443
            W+
Sbjct: 274 TWL 276


>gi|242220439|ref|XP_002475986.1| hypothetical WD-repeat protein [Postia placenta Mad-698-R]
 gi|220724814|gb|EED78833.1| hypothetical WD-repeat protein [Postia placenta Mad-698-R]
          Length = 695

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 67/201 (33%), Gaps = 15/201 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P+ + I+    FS +   VA  + D     R+ +           +    ++I    FS
Sbjct: 385 LPAHEDIITAIAFSRDGTLVATGSRDK----RIIVHHVPSLEREITLEGHTNLIKDVAFS 440

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREG 324
            + K  L+S   D  + ++S+        +L   +   + +   +SPD ++ V  S    
Sbjct: 441 PD-KELLVSGSVDFTVRLWSL----TNGRKLAEGHHDAMVMKVGFSPDGTRFVSAS---A 492

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +  +       +            +S  G  I      G+      +  D     
Sbjct: 493 DSTVCIWSTEDGAAISVLHGHMGVIHAMSFSSDGRRIVTGSDDGKAKVWSAVSGDC-FVT 551

Query: 385 LLVEDSNLQAPTWSPSGRSLI 405
           +  +   ++   +SP  + ++
Sbjct: 552 IDEKAGVVRQAMFSPDDQYVL 572



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/256 (12%), Positives = 80/256 (31%), Gaps = 45/256 (17%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
           ++LV+G V            RLW + + +++                H      + ++  
Sbjct: 444 ELLVSGSV--------DFTVRLWSLTNGRKLAE-------------GH------HDAMVM 476

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           + G       FVS S  S     ++C+    DGA I  +      ++    FS + +++ 
Sbjct: 477 KVGFSPDGTRFVSASADS-----TVCIWSTEDGAAI-SVLHGHMGVIHAMSFSSDGRRIV 530

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D +      +           I     ++    FS + +     +     M     
Sbjct: 531 TGSDDGK----AKVWSAVSGDCFVTIDEKAGVVRQAMFSPDDQ---YVLTAGTDMMARVN 583

Query: 288 DLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D  +    ++    L +  + +++ D   +           + +  ++  D+       +
Sbjct: 584 DSYTGERVQVIEGGLDLQTATTFTLDGKYVAAG---GHGNAINIWNTDTGDRVAQFLGHQ 640

Query: 347 ASYFDPVWSPQGDLIA 362
            +     +S  G  + 
Sbjct: 641 DTVTCIRFSADGLRVV 656



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 66/209 (31%), Gaps = 38/209 (18%)

Query: 258 SMILAPRFSSNGKRAL--ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            M++A   S NG+ A+           D   ++        L     I  + ++S D + 
Sbjct: 351 GMLIAVEVSPNGQFAVAGFEGSISCTWDNEVMNP-------LPAHEDIITAIAFSRDGTL 403

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIG 374
           +     R+ +  ++ +    S ++ I+ +   +   D  +SP  +L+         F + 
Sbjct: 404 VA-TGSRDKRIIVHHVP---SLEREITLEGHTNLIKDVAFSPDKELLVSGSVD---FTVR 456

Query: 375 VMKKDGSQERLLVEDSNLQAPT---WSPSGRSLI---------FSRKKDGDTGSKL---- 418
           +        R L E  +        +SP G   +             +DG   S L    
Sbjct: 457 LWSLTNG--RKLAEGHHDAMVMKVGFSPDGTRFVSASADSTVCIWSTEDGAAISVLHGHM 514

Query: 419 ---YSIDLNGRNETLINTPAYASDPQWVG 444
              +++  +     ++          W  
Sbjct: 515 GVIHAMSFSSDGRRIVTGSDDGKAKVWSA 543


>gi|161505657|ref|YP_001572769.1| hypothetical protein SARI_03833 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867004|gb|ABX23627.1| hypothetical protein SARI_03833 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 408

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 49/161 (30%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATLIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           +M   G +  +++           W P G  +     +     I        +   L   
Sbjct: 315 LMSPQGGEPCQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGKIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HGNPPSADAVVFSPDGRYIAWMEEVKGFR--QLW-VTETGR 408



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 13/113 (11%), Positives = 35/113 (30%), Gaps = 8/113 (7%)

Query: 267 SNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREG 324
                    ++ D     ++ +  Q     +LT+    +  + ++ P    +    +   
Sbjct: 295 PQATLIAFLMRDDNGVAQLWLMSPQGGEPCQLTHHATGVQSAFNWHPSGKWLGLVLE--- 351

Query: 325 KEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             ++    +       ++       S    V+SP G  IA+ +       + V
Sbjct: 352 -NRIACCDAQSGKIDFLTARHGNPPSADAVVFSPDGRYIAWMEEVKGFRQLWV 403



 Score = 43.1 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L +M   G     LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATLIAFLMRDDNGVAQLWLMSPQGGEPCQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        +ID    R GN  S   A  FS +G+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGKIDFLTARHGNPPSAD-AVVFSPDGRYIAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|291567907|dbj|BAI90179.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 435

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/246 (15%), Positives = 79/246 (32%), Gaps = 20/246 (8%)

Query: 182 ESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ +S    N+L   D   G  I  L    D +      +P+ +    A+ D      V 
Sbjct: 205 KTAISASGDNTLKWWDLATGWQIATLRGHTDSVTSV-AIAPDGKTAVSASEDT----TVK 259

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L D         +      +     + +GKR  IS  +D  + ++  DL + A       
Sbjct: 260 LWDLSTGAEIVTLRGHSREVNGVAITPDGKR-AISGSEDTTLKLW--DLATGAEIVTLRG 316

Query: 301 LFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               ++  + +PD  + +  S+      L +       +    +           +P G 
Sbjct: 317 HSREVNGVAITPDGKRAISASE---DTTLKLWDLATGAEIVTLRGHSREVKGVAITPDGK 373

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             A +    +   +  +   G        D  + +   +  G ++       GD   ++Y
Sbjct: 374 R-AISASEDKTLKLWDL-ATGEMLATFTGDGAIASCAVAADGVTVA-----GGDWLGRVY 426

Query: 420 SIDLNG 425
            + L G
Sbjct: 427 FLRLEG 432


>gi|150003690|ref|YP_001298434.1| peptidase [Bacteroides vulgatus ATCC 8482]
 gi|149932114|gb|ABR38812.1| peptidase [Bacteroides vulgatus ATCC 8482]
          Length = 747

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 92/296 (31%), Gaps = 64/296 (21%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-----IGNFR 257
            ++     D+    P  SP+ + +A+          +Y+ +    +  +      +GN+ 
Sbjct: 151 QKHWMEVDDEKTASPVPSPDGKWIAFI-----KNQNIYVKEVATGKEKQLSLDGTLGNYY 205

Query: 258 SMILAPRFSSNGKRAL------------ISVQKDEAMDI--------------------- 284
           S  +  R+S + K+                V+   A  +                     
Sbjct: 206 SAYI--RWSPDSKKVASCKIRPVEKRYVYYVESSPADQLQPKLHKQEYAKPGDELPFKVP 263

Query: 285 YSVDLQSNAT----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM--QSNGSDQ 338
              +++S  +      L +  +      ++PDS  + FE ++ G +   V+   +     
Sbjct: 264 CIYEVESGRSIIPSTELFDRQYEVYGPEWNPDSRAVTFEYNQRGHQVYRVLEFSAETGKV 323

Query: 339 KRI---SQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNL 392
           + +   + D   +Y          G  + +         + +  +  +Q    + +    
Sbjct: 324 RPLVEETSDTYVNYTRHFRHDLKDGKQMIWMSERDNWNHLYMYNRITAQPDYQITKGEWY 383

Query: 393 --QAPTWSPSGRSLIFSRK--KDGDTGSKL--YSIDLNGRNETLINTPAYASDPQW 442
             +        R + FS    + G+    +  Y I  +G+  T + TP       W
Sbjct: 384 VREVLRVDEDNRQIYFSANGMEAGEDPYLIRYYRIGFDGKGLTCL-TPEEGMHRAW 438



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 83/288 (28%), Gaps = 68/288 (23%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +++  +           P+     Y + D +   R  L D+   R  K +G      +
Sbjct: 49  NPQWIEGTHQFWYVRNT--PDGC--LYVSVDADKKARKELFDS--HRLAKALGAASGKEV 102

Query: 262 AP-----------------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            P                 RF  N +R + + +K++ ++  +V L       +       
Sbjct: 103 KPEALALGRLSVSKGLDTLRFVFNNQRWMYASRKNQLVNEGAVPLPPKQKHWMEVDDEKT 162

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD---KEASYFDPVWSPQGDLI 361
            S   SPD   I F       + +YV +     +K++S D            WSP    +
Sbjct: 163 ASPVPSPDGKWIAFIK----NQNIYVKEVATGKEKQLSLDGTLGNYYSAYIRWSPDSKKV 218

Query: 362 AFTKFSG--EKFAIGV-------------------------------MKKDGSQERLLVE 388
           A  K     +++   V                                + +  +  +   
Sbjct: 219 ASCKIRPVEKRYVYYVESSPADQLQPKLHKQEYAKPGDELPFKVPCIYEVESGRSIIPST 278

Query: 389 -----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
                   +  P W+P  R++ F   + G    ++            +
Sbjct: 279 ELFDRQYEVYGPEWNPDSRAVTFEYNQRGHQVYRVLEFSAETGKVRPL 326


>gi|194336343|ref|YP_002018137.1| WD-40 repeat protein [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308820|gb|ACF43520.1| WD-40 repeat protein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 960

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 74/208 (35%), Gaps = 24/208 (11%)

Query: 220 SPNQQKVAYATYDDEDILRVY---LMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRAL- 273
           SP+   V     ++    ++Y   +M        + IG         R  FS +G+    
Sbjct: 379 SPDG-MVVITVTNERQANKLYPEKVMRLWDASTGQMIGLPIINHGCERVEFSPDGRFVAS 437

Query: 274 -------ISVQKDEAMDIYSVDLQSNATE----RLTNTLFINISASYSPDSSQIVFESDR 322
                  I + +     +  +DL++        R ++ +    + ++S D S+ V   D 
Sbjct: 438 GNSYYKRILLSEIYQKTVRLIDLKTGNMVWESIRGSSDVGYVSAMAFSRDGSRFV-VGDS 496

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG--VMKKDG 380
           +G   L V+ ++   Q    +  EA      +S  G  IA T        I   VM  + 
Sbjct: 497 KGF--LQVLDASTGGQINKIKGHEAYINSLAFSLDGRYIASTSQD-RTVKIWNAVMGVEC 553

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           S        S     T+SP GR L ++ 
Sbjct: 554 SALMKNSTFSGSSIVTYSPDGRELTYAS 581



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/307 (14%), Positives = 92/307 (29%), Gaps = 28/307 (9%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           RV      R        +   ++ ++ + +     + R I     + +++SI G      
Sbjct: 425 RVEFSPDGRFVASG---NSYYKRILLSEIY---QKTVRLIDLKTGNMVWESIRGSSDVGY 478

Query: 175 SRILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
              +  S        G  K  L V+D             +  +    FS + + +A  + 
Sbjct: 479 VSAMAFSRDGSRFVVGDSKGFLQVLDASTGGQINKIKGHEAYINSLAFSLDGRYIASTSQ 538

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D    +   +M        K      S I+   +S +G+    +      ++I+      
Sbjct: 539 DRTVKIWNAVMGVECSALMKNSTFSGSSIV--TYSPDGRELTYA-SFGGTVEIWRTSGWE 595

Query: 292 NATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQKR---------I 341
           ++   +   ++   S +  S D   +       G   + V  +                 
Sbjct: 596 SSQNNIGKVIWPETSITCTSKDGRLVALGY---GDGSILVFDAASGKLAGPLIKGYIGLP 652

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWS 398
           S D+        + P G+ I    F GE     V         ++  ++ L  P     S
Sbjct: 653 SIDRFGGIEAMCFDPDGNSIIACHFHGEMQRWDVKTGKNIGSTMIAGENFLFHPVAVAVS 712

Query: 399 PSGRSLI 405
             G+ +I
Sbjct: 713 NDGKKII 719



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 64/177 (36%), Gaps = 28/177 (15%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--------- 298
           R  K+I   +  I+A  +S +G + ++  ++D A++ +  D ++    R T         
Sbjct: 269 RDLKKIVTDKEPIIAMTYSPDGSQIVV-GREDCAVEFW--DAKTGNFIRRTVFENNEDAL 325

Query: 299 -NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS--DQKRISQDKEASYFDPVWS 355
            N +FIN+          +       G+  + V   N      K I+  K+    D   S
Sbjct: 326 INKMFINV-----AKGRAVATVPVGGGELTVRVYDINTGVLTVKCITLKKD-ELTDVKMS 379

Query: 356 PQGDLIAFTKFSGEKFAIG------VMKKDGSQER-LLVEDSNLQAPTWSPSGRSLI 405
           P G ++       +   +       +      Q   L + +   +   +SP GR + 
Sbjct: 380 PDGMVVITVTNERQANKLYPEKVMRLWDASTGQMIGLPIINHGCERVEFSPDGRFVA 436


>gi|108803454|ref|YP_643391.1| peptidase S9, prolyl oligopeptidase active site region [Rubrobacter
           xylanophilus DSM 9941]
 gi|108764697|gb|ABG03579.1| peptidase S9, prolyl oligopeptidase active site region [Rubrobacter
           xylanophilus DSM 9941]
          Length = 645

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 44/122 (36%), Gaps = 13/122 (10%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD------EAM 282
            +        +  +    DR P+ + +    + +PR S +G R    +  D      +  
Sbjct: 136 PSGGGGPRNELVAVPLEGDRRPEVLVSGPDFVASPRLSPDGSRLAW-LSWDLPNMPWDGT 194

Query: 283 DIYSVDLQS----NATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            +++ DL +        ++      ++    +SP    + F SDR G   LY +   G  
Sbjct: 195 WLWTADLDAAGRPAGARQVAGGPAESVFQPEWSPRG-LLYFVSDRAGWWNLYRLSPYGRA 253

Query: 338 QK 339
           + 
Sbjct: 254 EP 255



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 9/118 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVY 240
             G  +N L  +  +G     +  S    +  PR SP+  ++A+ ++D      D   ++
Sbjct: 138 GGGGPRNELVAVPLEGDRRPEVLVSGPDFVASPRLSPDGSRLAWLSWDLPNMPWDGTWLW 197

Query: 241 LMDTRIDRAP----KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             D      P    +  G     +  P +S  G        +    ++Y +     A 
Sbjct: 198 TADLDAAGRPAGARQVAGGPAESVFQPEWSPRG-LLYFVSDRAGWWNLYRLSPYGRAE 254



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 51/188 (27%), Gaps = 24/188 (12%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-----SDREG-K 325
            + S   D         L       +T       +     +    V       S   G +
Sbjct: 88  VVFSNLGDGR----LYRLDGGVPRPITPPGEARYADLLLDEQRDRVLCVREEPSGGGGPR 143

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDG 380
            +L  +   G  +  +          P  SP G  +A+  +           +     D 
Sbjct: 144 NELVAVPLEGDRRPEVLVSGPDFVASPRLSPDGSRLAWLSWDLPNMPWDGTWLWTADLDA 203

Query: 381 SQE----RLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           +      R +          P WSP G  L F   + G     LY +   GR E +    
Sbjct: 204 AGRPAGARQVAGGPAESVFQPEWSPRG-LLYFVSDRAG--WWNLYRLSPYGRAEPVCPMK 260

Query: 435 AYASDPQW 442
           A    PQW
Sbjct: 261 AEFGVPQW 268


>gi|332707524|ref|ZP_08427566.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332353699|gb|EGJ33197.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 967

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 65/217 (29%), Gaps = 14/217 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +     +P+  +V   + D      V + D         +    S + A  
Sbjct: 153 STLSGHGDSVNAVAVTPDGTRVISGSSDH----TVKVWDLNTGAEVLTLTGHTSPVNAVA 208

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
            + +G R +IS   D  + ++  +L +       N     ++A + +PD ++++      
Sbjct: 209 VTPDGTR-VISGASDNTIRVW--NLATGKEILRFNGHSAPVNAVAVTPDGTRVI---SGA 262

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + V  S    +              V +P G+             I V   +  +E
Sbjct: 263 SDNTVKVWNSATGQEILTFNGHSTPIVALVITPDGNKAVSASIVEVYHHIIVWNLETGKE 322

Query: 384 RLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            L      + ++    +     LI+       T   L
Sbjct: 323 ELTREYNGNLVKTVAITSD-NHLIYGSDNGAITIWSL 358



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 72/214 (33%), Gaps = 20/214 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +P+   V   + +      + + + +  +    +   R  I +   + +GK  + S  
Sbjct: 771 SITPDGNYVIAGSTNS----TIKVWNLQTRKLRFLLKGHRQEITSLAITPDGKYLV-SGS 825

Query: 278 KDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           KD+ + I+  +L++      LT       + + +PD + +V  S+      + +      
Sbjct: 826 KDKTIKIW--NLETRKECFTLTGHGDSVNTLAVTPDGNYVVSGSE---DNTIKIWDLEKR 880

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAP 395
           ++         S      +  G L+           + V   +  +       +S +   
Sbjct: 881 EEIFTFTGHTDSINRIKVTSNGKLVISASSDKT---LQVWDFETREVIATFTGESAINCC 937

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +P   +++      GD G  ++ + L G    
Sbjct: 938 AVAPDDVTIV-----AGDEGGNMHFLRLEGVGSR 966



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 13/132 (9%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S S +PD + ++  S       + V        + + +           +P G  +   
Sbjct: 768 TSISITPDGNYVIAGST---NSTIKVWNLQTRKLRFLLKGHRQEITSLAITPDGKYLVSG 824

Query: 365 KFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                   I +   +  +E   L     ++     +P G  ++       D   K++  D
Sbjct: 825 SKDKT---IKIWNLETRKECFTLTGHGDSVNTLAVTPDGNYVV---SGSEDNTIKIW--D 876

Query: 423 LNGRNETLINTP 434
           L  R E    T 
Sbjct: 877 LEKREEIFTFTG 888


>gi|322701486|gb|EFY93235.1| Periodic tryptophan protein 2 [Metarhizium acridum CQMa 102]
          Length = 893

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 98/247 (39%), Gaps = 21/247 (8%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D  NI  L+ S++ I F    + + + +A+       +L V+   +      K+ G+F 
Sbjct: 289 PDFNNIHKLSISQNDIDFV-TINKSGEWLAFGASKLGQLL-VWEWQSE-SYILKQQGHFD 345

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQI 316
           SM     +S +G+R  I+   D  + ++  D++S       T       +  ++   + +
Sbjct: 346 SMNSL-VYSPDGQRI-ITTADDGKIKVW--DIESGFCIVTFTEHTSGVTACEFAKKGN-V 400

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +F +  +G  + + +     + +  +     S+      P G+++A        F + + 
Sbjct: 401 LFTASLDGSIRAWDL-IRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSLD--SFDVHIW 457

Query: 377 KKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                  +LL + S  + P     +SP+G SL+       D  ++++SI    +    + 
Sbjct: 458 SVQTG--QLLDQMSGHEGPVSALAFSPNGDSLVSGSW---DRTARIWSIFSRTQTSEPLQ 512

Query: 433 TPAYASD 439
             A   D
Sbjct: 513 LQADVLD 519



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 61/325 (18%), Positives = 107/325 (32%), Gaps = 48/325 (14%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           FN I + S  Q   +  +I +  +W + GA  L           +L V    W+ +    
Sbjct: 291 FNNIHKLSISQNDIDFVTINKSGEWLAFGASKL----------GQLLV----WEWQSESY 336

Query: 139 IIGKK--------FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG--- 187
           I+ ++           SP   R I  T +DD    +   +  F         S V+    
Sbjct: 337 ILKQQGHFDSMNSLVYSPDGQRII--TTADDGKIKVWDIESGFCIVTFTEHTSGVTACEF 394

Query: 188 -IIKNSLCVMDRDGA----------NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               N L     DG+          N R  T             P+ + VA  + D    
Sbjct: 395 AKKGNVLFTASLDGSIRAWDLIRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSLDS--- 451

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             V++   +  +   ++      + A  FS NG   + S   D    I+S+  ++  +E 
Sbjct: 452 FDVHIWSVQTGQLLDQMSGHEGPVSALAFSPNGDSLV-SGSWDRTARIWSIFSRTQTSEP 510

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L       +  +  PDS Q+   S  +G+   + M ++      +   ++ S     +S 
Sbjct: 511 L-QLQADVLDIAIRPDSLQLA-ISTLDGQLTFWSM-ADAEQVAGLDGRRDVS-GGRKFSD 566

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGS 381
                A      + F       DGS
Sbjct: 567 --RRTAANVQGTKSFNSIRYSTDGS 589


>gi|322699063|gb|EFY90828.1| WD repeat domain-containing protein [Metarhizium acridum CQMa 102]
          Length = 482

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 72/222 (32%), Gaps = 31/222 (13%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              R +       + + R SPN + +A A+ D      + L D         +    + +
Sbjct: 138 YRPRLVLHGHTGPVSQVRISPNGKFIASASADG----TLKLWDAATGAHMDTLVGHMAGV 193

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--------------NTLFINIS 306
               ++ +      S   D+A+ ++  D  +   +  T              +  +I+  
Sbjct: 194 SCVAWTPDSNTLA-SGSDDKAIRLW--DRVTGRPKTTTRKAIAGQEMAALRGHHNYIHCL 250

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A +SP  + +   S     E +++         R             +   G L+     
Sbjct: 251 A-FSPKGNILASGSY---DEAVFLWDVRAGRLMRSLPAHSDPVSGIDFCRDGTLVVSCST 306

Query: 367 SGEKFAIGVMKKDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
            G    I V      Q  R LV + N  +    +SP+GR ++
Sbjct: 307 DG---LIRVWDTSTGQCLRTLVHEDNPAVTNVCFSPNGRFVL 345


>gi|254881081|ref|ZP_05253791.1| peptidase [Bacteroides sp. 4_3_47FAA]
 gi|319640089|ref|ZP_07994816.1| peptidase [Bacteroides sp. 3_1_40A]
 gi|254833874|gb|EET14183.1| peptidase [Bacteroides sp. 4_3_47FAA]
 gi|317388367|gb|EFV69219.1| peptidase [Bacteroides sp. 3_1_40A]
          Length = 747

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 92/296 (31%), Gaps = 64/296 (21%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-----IGNFR 257
            ++     D+    P  SP+ + +A+          +Y+ +    +  +      +GN+ 
Sbjct: 151 QKHWMEVDDEKTASPVPSPDGKWIAFI-----KNQNIYVKEVATGKEKQLSLDGTLGNYY 205

Query: 258 SMILAPRFSSNGKRAL------------ISVQKDEAMDI--------------------- 284
           S  +  R+S + K+                V+   A  +                     
Sbjct: 206 STYI--RWSPDSKKVASCKIRPVEKRYVYYVESSPADQLQPKLHKQEYAKPGDELPFKVP 263

Query: 285 YSVDLQSNAT----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQ 338
              +++S  +      L +  +      ++PDS  + FE ++ G +   V  + +     
Sbjct: 264 CIYEVESGRSIIPSTELFDRQYEVYGPEWNPDSRAVTFEYNQRGHQVYRVLELSAETGKV 323

Query: 339 KRI---SQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNL 392
           + +   + D   +Y          G  + +         + +  +  +Q    + +    
Sbjct: 324 RPLVEETSDTYVNYTRHFRHDLKDGKQMIWMSERDNWNHLYMYNRITAQPDYQITKGEWY 383

Query: 393 --QAPTWSPSGRSLIFSRK--KDGDTGSKL--YSIDLNGRNETLINTPAYASDPQW 442
             +        R + FS    + G+    +  Y I  +G+  T + TP       W
Sbjct: 384 VREVLRVDEDNRQIYFSANGMEAGEDPYLIRYYRIGFDGKGLTCL-TPEEGMHRAW 438



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/194 (12%), Positives = 67/194 (34%), Gaps = 18/194 (9%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRF 265
            R   ++ P ++P+ + V +        +   L  +      + +    +   +     F
Sbjct: 282 DRQYEVYGPEWNPDSRAVTFEYNQRGHQVYRVLELSAETGKVRPLVEETSDTYVNYTRHF 341

Query: 266 S---SNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINIS-ASYSPDSSQIVFES 320
                +GK+ +   ++D    +Y  +  +     ++T   +          D+ QI F +
Sbjct: 342 RHDLKDGKQMIWMSERDNWNHLYMYNRITAQPDYQITKGEWYVREVLRVDEDNRQIYFSA 401

Query: 321 D--REGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +    G++    + Y +  +G     ++ ++        +S     +       +K  + 
Sbjct: 402 NGMEAGEDPYLIRYYRIGFDGKGLTCLTPEEGMHRAW--FSGDMKYLVDVYSMVDKVPVA 459

Query: 375 VMK--KDGSQERLL 386
           V++  +DG     L
Sbjct: 460 VLRSARDGKVVMPL 473


>gi|328880701|emb|CCA53940.1| peptidase S9, prolyl oligopeptidase [Streptomyces venezuelae ATCC
           10712]
          Length = 688

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 3/105 (2%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P     G++      +D A  +++  + S+    L          S+SP    I +    
Sbjct: 55  PSPDPRGEQVAFICDRDGAPQLWAGPVGSDDAHLLDTGPDHVTEVSWSPSGEWIAYTVAP 114

Query: 323 EGKEQLYV--MQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFT 364
            G     V  ++ +GSD++ ++  +   S +   W+  G  +A T
Sbjct: 115 GGSGHTRVLCVRPDGSDRRVLAGAEPGSSAYLGCWARDGSAVAVT 159



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 1/94 (1%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLI 405
              + P   P+G+ +AF         +           LL     ++   +WSPSG  + 
Sbjct: 50  HGCWYPSPDPRGEQVAFICDRDGAPQLWAGPVGSDDAHLLDTGPDHVTEVSWSPSGEWIA 109

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           ++    G   +++  +  +G +  ++      S 
Sbjct: 110 YTVAPGGSGHTRVLCVRPDGSDRRVLAGAEPGSS 143



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 76/267 (28%), Gaps = 54/267 (20%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            + P   P  ++VA+    D D                 +      +    +S +G+   
Sbjct: 52  CWYPSPDPRGEQVAF--ICDRDGAPQLWAGPVGSDDAHLLDTGPDHVTEVSWSPSGEWIA 109

Query: 274 ISVQKDEAMDIYSVDLQ-SNATERLTNTLFINISA---SYSPDSSQIVFE---------- 319
            +V    +     + ++   +  R+        SA    ++ D S +             
Sbjct: 110 YTVAPGGSGHTRVLCVRPDGSDRRVLAGAEPGSSAYLGCWARDGSAVAVTVAEPVGERAR 169

Query: 320 -----------SDREGKEQL----------------------YVMQSNGSDQKRISQD-- 344
                      ++R+G   L                      Y++   G+   R+  D  
Sbjct: 170 PLASTGPSAGWTERDGHATLLDGVPPGGADRAPAPVRDRLTAYLLDPAGTTAPRLLADET 229

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGR 402
             A+      S  G L    +    +    V++         L V D +     +S   R
Sbjct: 230 GAATLRVCDISQDGRLALLRRGPRARREAVVVRTADQALTCALPVADGDPWIGRFSSDAR 289

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNET 429
           ++ + R       + L ++ L+G  E 
Sbjct: 290 TV-WLRSDHEREFAALLALRLDGAGER 315


>gi|325094987|gb|EGC48297.1| transcriptional repressor TUP1 [Ajellomyces capsulatus H88]
          Length = 497

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/325 (14%), Positives = 115/325 (35%), Gaps = 52/325 (16%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G +R     +++DV   + +   +                DD   S+  ++GD 
Sbjct: 201 GKYVATGCNR---SAQIFDVATGQLVTALQ----------------DD---SVLDKEGDL 238

Query: 174 NSRILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             R +  S       +G     + V D     I+++    +Q ++   F+ N + +A  +
Sbjct: 239 YIRSVCFSPDGRYLATGAEDKQIRVWDIATRTIKHIFSGHEQDIYSLDFARNGRYIASGS 298

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D      V L D  +D   + I +    +     S +G+    +   D+++ ++  D  
Sbjct: 299 GDK----TVRLWDI-VDGKQELILSIEDGVTTVAISPDGRFVA-AGSLDKSVRVW--DTT 350

Query: 291 SNAT-ERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN----------GS 336
           +    ERL N    +    S +++P+   +V  S  +   +++ +             G 
Sbjct: 351 TGYLVERLENPDGHMDSVYSVAFAPNGRDLVSGSL-DKTIKMWELTPPRGMVPGAGPKGG 409

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
              R  +  +        +P G  +           +          +++++       +
Sbjct: 410 KCVRTFEGHKDFVLSVCLTPDGRWVMSGSKDRG---VQFWDPATGNAQMMLQGHKNSVIS 466

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
            +PS    +F+    GD  ++++S 
Sbjct: 467 VAPSPTGNLFATG-SGDMRARIWSY 490



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 52/158 (32%), Gaps = 17/158 (10%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA------- 307
             S++   RFS++GK                 D+ +      L +   ++          
Sbjct: 188 HDSVVCCVRFSNDGKYVA----TGCNRSAQIFDVATGQLVTALQDDSVLDKEGDLYIRSV 243

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD   +   ++    +Q+ V        K I    E   +   ++  G  IA     
Sbjct: 244 CFSPDGRYLATGAE---DKQIRVWDIATRTIKHIFSGHEQDIYSLDFARNGRYIASGSGD 300

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  ++  DG QE +L  +  +     SP GR + 
Sbjct: 301 KTVRLWDIV--DGKQELILSIEDGVTTVAISPDGRFVA 336


>gi|239995296|ref|ZP_04715820.1| WD40 domain-containing protein [Alteromonas macleodii ATCC 27126]
          Length = 535

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 73/247 (29%), Gaps = 52/247 (21%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFR----SMILAPRFSSNGKRALISVQ------- 277
            + D  D   +++ D   +   +   +F         +P  S +GK  + +         
Sbjct: 129 VSPDTNDSADIFIRDRVNNTTVRIKNSFDQELNGGSRSPHISRDGKYVVFATSATNSIDS 188

Query: 278 ----KDEAMDIYSVDLQSNATERLT-NTLFINIS-----ASYSPDSSQIVFES----DRE 323
                    DI   ++++     ++ ++     S        + D   + F S    D  
Sbjct: 189 LEDENGSVSDIILHEIETGKNTLISVDSNGNQKSEGSYVPRVNQDGKFVAFRSNSSFDST 248

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDP-------VWSPQGDLIAFTKFSGEK------ 370
           G   +++          +S   ++S +           S  G  +AFT            
Sbjct: 249 GYSGVFIRDMERRTTSIVSSPNQSSGYASFEVNGRLAISNDGRRVAFTLHDHNGTFSSEN 308

Query: 371 -----FAIGVMKKDGSQERLLVEDSN--------LQAPTWSPSGRSLIFSR-KKDGDTGS 416
                + + +   D  +  L+ +  N           P  S  G+S+ F       D   
Sbjct: 309 NFTYTYNVYLKDLDTGRLYLVSDPINKSVTRYESADNPAISGDGKSVSFESFDNSFDPLD 368

Query: 417 KLYSIDL 423
           + Y  D+
Sbjct: 369 RNYVTDI 375



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 43/294 (14%), Positives = 86/294 (29%), Gaps = 65/294 (22%)

Query: 210 RDQILFEPRFSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIGNFRSM--- 259
            +     P  S N + V + +        +   +  +YL D   ++          +   
Sbjct: 43  GESWNSAPYISSNGRFVVFNSTAADIVGLEGNGVSHIYLWDALTNKIELVSVASDGLEGD 102

Query: 260 --ILAPRFSSNGKRALI----------SVQKDEAMDIYSVDLQSNATERLTNT-----LF 302
                   S +G+  +           S   +++ DI+  D  +N T R+ N+       
Sbjct: 103 LNSSNSSVSDDGRFVVFESESILLDVVSPDTNDSADIFIRDRVNNTTVRIKNSFDQELNG 162

Query: 303 INISASYSPDSSQIVFES----------DREGK-EQLYVMQSNGSDQKRISQDKEASY-- 349
            + S   S D   +VF +          D  G    + + +        IS D   +   
Sbjct: 163 GSRSPHISRDGKYVVFATSATNSIDSLEDENGSVSDIILHEIETGKNTLISVDSNGNQKS 222

Query: 350 ---FDPVWSPQGDLIAFTKFSG----EKFAIGVMKKDGSQERLLVEDSNLQAPT------ 396
              + P  +  G  +AF   S         + +   +     ++   +            
Sbjct: 223 EGSYVPRVNQDGKFVAFRSNSSFDSTGYSGVFIRDMERRTTSIVSSPNQSSGYASFEVNG 282

Query: 397 ---WSPSGRSLIF---------SRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
               S  GR + F         S + +      +Y  DL+     L++ P   S
Sbjct: 283 RLAISNDGRRVAFTLHDHNGTFSSENNFTYTYNVYLKDLDTGRLYLVSDPINKS 336


>gi|85860095|ref|YP_462297.1| outer membrane protein [Syntrophus aciditrophicus SB]
 gi|85723186|gb|ABC78129.1| outer membrane protein [Syntrophus aciditrophicus SB]
          Length = 885

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 13/141 (9%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           M  R ++   +  +I L  L+               ++                      
Sbjct: 1   MHKRMYL---MFHRICLIGLVAFFLAVGNLPAQEAARIVI-------FPFDVFTSADKAS 50

Query: 61  LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITN--PDSIPRFQDWNSLGAQVLVTGRVIK 118
           L   +S  +S +L+RS    LI + ++   +          F+     GA  +V G + +
Sbjct: 51  LQAVISRNLSSELRRSGKIVLIEESAYADLLAGQAASEALGFRIGRDKGADYVVMGSLSE 110

Query: 119 EGKDRLRVEFRLWDVKDRKQI 139
            G+  L  + R+ D++  K++
Sbjct: 111 FGE-TLSADVRILDIRQGKRM 130


>gi|193587325|ref|XP_001951316.1| PREDICTED: WD repeat-containing protein 26-like [Acyrthosiphon
           pisum]
          Length = 577

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 56/160 (35%), Gaps = 11/160 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +       ++  RFSPN +K+A  + D   I+     +T        +      +    
Sbjct: 258 QILTEHCDEVWFCRFSPNGKKLATGSKDASIIIYDVDPETLTVEQSITLDGHSYGVSYLS 317

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDR 322
           +S +G   L++   ++  D++  ++ +       +    +   + S+  D  + V    R
Sbjct: 318 WSPDG-ELLMACGPEDCPDLWVWNVSTGVLRLKLSHSSDDSLTACSWHKDGQKFVCGGIR 376

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLI 361
               Q Y    +G+    +    E    + +W    G  +
Sbjct: 377 G---QFYQCDLDGA----VLDSWEGVRVNCLWCRSDGKTV 409



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 12/134 (8%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDK-EASYFDPVW 354
           LT          +SP+  ++     ++    +Y +       ++ I+ D          W
Sbjct: 260 LTEHCDEVWFCRFSPNGKKLA-TGSKDASIIIYDVDPETLTVEQSITLDGHSYGVSYLSW 318

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQ--APTWSPSGRSLIFSRKKD 411
           SP G+L+           + V        RL L   S+    A +W   G+  +      
Sbjct: 319 SPDGELLMACGPEDCP-DLWVWNVSTGVLRLKLSHSSDDSLTACSWHKDGQKFVC----- 372

Query: 412 GDTGSKLYSIDLNG 425
           G    + Y  DL+G
Sbjct: 373 GGIRGQFYQCDLDG 386


>gi|86742861|ref|YP_483261.1| hypothetical protein Francci3_4184 [Frankia sp. CcI3]
 gi|86569723|gb|ABD13532.1| WD-40 repeat-containing protein [Frankia sp. CcI3]
          Length = 1657

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 79/252 (31%), Gaps = 23/252 (9%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++ SG    +L + D  G     +     + L+     PN + +A  T D    +R++ 
Sbjct: 1289 RTLASGADDRTLRLWDVPG----PVLVGHHRFLWSTAVHPNGRVLA--TGDYGQTVRLWD 1342

Query: 242  MDTRIDRAPKR-IGNFRSMILAPRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATE 295
                    P   +  F + + + RF+ NG+  +      +   D  + ++  D+      
Sbjct: 1343 AHDPDRPLPAATLTGFNAAVGSVRFTPNGRVLIAGSLDYATDFDGMVTLW--DVADIHRP 1400

Query: 296  RL--TNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            RL  T    I        SPD   +           + +        + +          
Sbjct: 1401 RLLSTIHPGIGGIKDLEVSPDGRTLALAGTSARLALVDISAPATPRGRSVLAGHRYDVAT 1460

Query: 352  PVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
              +SP G  +A          + I    +      +    S L    +S  GR+L     
Sbjct: 1461 VSFSPDGRTLASGSSDRTIRLWDITTPDRPAGISTITGFTSALITIAFSRDGRTLAVGS- 1519

Query: 410  KDGDTGSKLYSI 421
               DT   L+ +
Sbjct: 1520 --FDTKVALWDV 1529



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 88/276 (31%), Gaps = 35/276 (12%)

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              +  +   F+    FV+ +           + D     +    P     +    F  + 
Sbjct: 1047 HRLAVKSVAFSPDGRFVA-TGSDDRTVRLWTITDPTHPVLAATLPGASDSIHGLAFRSDS 1105

Query: 224  QKVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAPRFSSNGK---------RAL 273
            + +A  T      +R++ + D    R    I    + + A  FS +G          RAL
Sbjct: 1106 RVLA--TGGYGSQVRLWDVSDVSAIRPAGAITAHTANVRAVAFSPDGTELLTGGDDGRAL 1163

Query: 274  ISVQKDEAMDIYSVDLQS--NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +   +D A      +L+        L+    +   A  SPD    V      G +     
Sbjct: 1164 LWDVRDLAAPAELSELKGEAGPNVVLSANTAVRAVA-ISPDGKTAV-----TGSDDTTAR 1217

Query: 332  QSNGSDQKRISQ----DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERL 385
              + +D +R +     D+  S      +  G L+A     G   A+ +           +
Sbjct: 1218 VFDLTDPRRPTTLQVIDEVRSVEAVAVNVDG-LVAV----GVNSAVEIYDPSRHFDAIAV 1272

Query: 386  LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            L   S   A  +SP GR+L        D   +L+ +
Sbjct: 1273 LPHASKPWALAFSPDGRTLA---SGADDRTLRLWDV 1305


>gi|115496374|ref|NP_001068825.1| WD repeat and SOCS box-containing protein 2 [Bos taurus]
 gi|116256125|sp|Q0V8J1|WSB2_BOVIN RecName: Full=WD repeat and SOCS box-containing protein 2;
           Short=WSB-2
 gi|110331921|gb|ABG67066.1| WD SOCS-box protein 2 [Bos taurus]
 gi|296478478|gb|DAA20593.1| WD repeat and SOCS box-containing protein 2 [Bos taurus]
          Length = 406

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 83/216 (38%), Gaps = 23/216 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D+
Sbjct: 121 PDVSCLILATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDK 178

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 179 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 235

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----------- 389
             +  ++S     +SP   L+    +      I      G + R L              
Sbjct: 236 KLEGHQSSVVSCDFSPDSALLVTASYDTN--VIMWDPYTGERLRSLHHTQLNPPMDDSDV 293

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S+L++  +SP G   ++      D   ++++++L
Sbjct: 294 HISSLRSVCFSPEG---LYLATVADDRLLRIWALEL 326



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 82/278 (29%), Gaps = 42/278 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 18  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKN 77

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKR---------------ALISVQKDEAM 282
           +T+   +PK            +  +P  S   K+                L +   D  +
Sbjct: 78  ETKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSKKLWARHHPQVPDVSCLILATGLNDGQI 137

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 138 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 196

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 197 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 254

Query: 403 SLIFSRKKDGDTGSKLYS-IDLNGRNETLINTPAYASD 439
            L+ +           Y+   L   + T +N P   SD
Sbjct: 255 LLVTASYDTNVIMWDPYTGERLRSLHHTQLNPPMDDSD 292


>gi|299137160|ref|ZP_07030342.1| WD40 repeat, subgroup [Acidobacterium sp. MP5ACTX8]
 gi|298600565|gb|EFI56721.1| WD40 repeat, subgroup [Acidobacterium sp. MP5ACTX8]
          Length = 564

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 54/319 (16%), Positives = 96/319 (30%), Gaps = 75/319 (23%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G F+S     S+ + +G     + V D   +     +       +   FSP+ + VA 
Sbjct: 163 VSGVFSSD----SKQIATGTEDGKVTVWDASTSKRLATSMQFIGSAWSVSFSPDGKIVAA 218

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           ++    D  +    D    +    +  +        FSS+GK  LI+    +        
Sbjct: 219 SS----DEGKARTWDAATGKPLSPLIEYHEAAYHVSFSSDGKALLIAT--GDNFADLRDP 272

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIV------------------------------- 317
                  +L     I  SA +SPD+ +IV                               
Sbjct: 273 RTGVRIRQLRRGNDI-YSAQFSPDNKRIVTACADSTAEIWDAQNGTPIGSVMSHGFGVGS 331

Query: 318 --FESD--------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             F SD        ++   +++   S+      +     A      +S    L+A     
Sbjct: 332 AEFNSDASLIVTASKDHAVRIWSTSSDKLTVPPL--QHPAPVGRASFSLDSKLVATVA-- 387

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               A+ +      ++  L    +   P  ++SP G SL+ +    G      + IDL  
Sbjct: 388 -GDKAVRLWDTSTGEQIQLPTLLSDGPPYFSFSPDGLSLLIAGGSSG------WVIDL-- 438

Query: 426 RNETLINTPAYASDPQWVG 444
                   P     P WV 
Sbjct: 439 --------PPNEEAPSWVA 449



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 53/398 (13%), Positives = 119/398 (29%), Gaps = 36/398 (9%)

Query: 48  VSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLG 107
           + I    FV     G  +++ ++ +       N     S     T+      + D+  L 
Sbjct: 14  LPIPVLMFVLSQGGGSLIAQAIANN-------NQGPSVSVGATKTSAAVTESYIDY--LK 64

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
           A  L                 RL  V +  ++      +S  ++R +A   ++     + 
Sbjct: 65  AFELAETGSKPAA-------LRL--VAESLRLQPGNLVASRFAFRLLAEQRANTAL-RLQ 114

Query: 168 GEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           G  G   S       + +++    ++  V D         +   D  +    FS + +++
Sbjct: 115 GHTGVITSASYSPDGTKILTTSKDHTARVWDARTGVQLTPSLDHDDEVVSGVFSSDSKQI 174

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A  T D +    V + D    +       F     +  FS +GK  + +   +     + 
Sbjct: 175 ATGTEDGK----VTVWDASTSKRLATSMQFIGSAWSVSFSPDGK-IVAASSDEGKARTWD 229

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                     L          S+S D   ++      G     +         RI Q + 
Sbjct: 230 A-ATGKPLSPLIEYHEAAYHVSFSSDGKALLIA---TGDNFADLRDPRTG--VRIRQLRR 283

Query: 347 ASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +  +   +SP    I  T  +     I   +       ++     + +  ++     ++
Sbjct: 284 GNDIYSAQFSPDNKRIV-TACADSTAEIWDAQNGTPIGSVMSHGFGVGSAEFNSDASLIV 342

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            + K   D   +++S   +      +  PA      + 
Sbjct: 343 TASK---DHAVRIWSTSSDKLTVPPLQHPAPVGRASFS 377


>gi|168699618|ref|ZP_02731895.1| probable vegetatible incompatibility protein HET-E-1 [Gemmata
           obscuriglobus UQM 2246]
          Length = 453

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 48/153 (31%), Gaps = 12/153 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  ++A   Y +     V + DT   +   R+      + +  FS +GK+      
Sbjct: 125 AFSPDGAQLAVTGYHE-----VLIYDTTELKLRSRLIGISERVQSLAFSPDGKKLAAVGG 179

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVF-ESDREGKEQLYVMQSN 334
                    V    +    L+  +  +     S+SPD   + F  +D      +  + + 
Sbjct: 180 APGRFGEVQVWRPGDEKLLLSAPVTFDTLYGVSWSPDGKTLAFGCAD----NTVRAIDAA 235

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
              Q              V+S  G  +      
Sbjct: 236 SGKQTLQMGTHSDWVLGTVFSQDGAHLISVGRD 268



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 73/221 (33%), Gaps = 40/221 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + +A+   D+     V  +D    +   ++G     +L   FS +G    ISV 
Sbjct: 212 SWSPDGKTLAFGCADN----TVRAIDAASGKQTLQMGTHSDWVLGTVFSQDGAHL-ISVG 266

Query: 278 KDEAMDI------------------------YSVDLQSNATERLTNTLFINISASYSPDS 313
           +D +M +                         +VD +     R+T     +    +    
Sbjct: 267 RDMSMKLTEVETQRFVDNVTSITPGALKGGLITVDRRPVKERRVTKVP-QDEGGKFIEKV 325

Query: 314 SQIVFESDREGKEQLYVMQS-------NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              V  +  +G+ +LY +         + +++ R  +          ++  G   A    
Sbjct: 326 YDEVVVAGADGRPRLYKIHREVKRQIGDDANKIREYEPLPGRVSAVAFNSDGSKFAACSS 385

Query: 367 SGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
              K  + V     S  +++ E     +    W P G+ + 
Sbjct: 386 LDGKGEVRVYD-STSGAKVVCEKVTGPVYTVAWQPDGKRIA 425



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 16/128 (12%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD +Q+       G  ++ +  +     +              +SP G  +A    +
Sbjct: 125 AFSPDGAQLAVT----GYHEVLIYDTTELKLRSRLIGISERVQSLAFSPDGKKLAAVGGA 180

Query: 368 GEKF-AIGVMKKDGSQERLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +F  + V +     E+LL+        L   +WSP G++L F     G   + + +ID
Sbjct: 181 PGRFGEVQVWRP--GDEKLLLSAPVTFDTLYGVSWSPDGKTLAF-----GCADNTVRAID 233

Query: 423 LNGRNETL 430
                +TL
Sbjct: 234 AASGKQTL 241



 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 4/76 (5%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +++ D S+    S  +GK ++ V   + S  K + +      +   W P G  IA   F 
Sbjct: 372 AFNSDGSKFAACSSLDGKGEVRVYD-STSGAKVVCEKVTGPVYTVAWQPDGKRIASAGFD 430

Query: 368 GEKFAIGVMKKDGSQE 383
           G    + +      + 
Sbjct: 431 GT---VWLHDPATGKL 443



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 50/163 (30%), Gaps = 19/163 (11%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
             DR+ +  ++    P           + +Y  +     D   R+  +   V   I    
Sbjct: 299 TVDRRPVKERRVTKVPQD---EGGKFIEKVYDEVVVAGADGRPRLYKIHREVKRQIG--- 352

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDEDILRVYLMDTRIDRAPK 251
                 D AN           +    F+ +  K A  +  D +  +RVY   +      +
Sbjct: 353 ------DDANKIREYEPLPGRVSAVAFNSDGSKFAACSSLDGKGEVRVYDSTSGAKVVCE 406

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           ++      +    +  +GKR   S   D  + ++  D  +   
Sbjct: 407 KVT---GPVYTVAWQPDGKRIA-SAGFDGTVWLH--DPATGKL 443


>gi|39973165|ref|XP_367973.1| hypothetical protein MGG_07877 [Magnaporthe oryzae 70-15]
 gi|145012683|gb|EDJ97337.1| hypothetical protein MGG_07877 [Magnaporthe oryzae 70-15]
          Length = 718

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 67/209 (32%), Gaps = 39/209 (18%)

Query: 265 FSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLTNTL-----------FINIS 306
            S +G +     +          +  IY V     A + +                 + S
Sbjct: 236 LSPDGSKVAFMTKDIGLPLANTTSTQIYLVPFTGTAKDAVPINPRSSSAKYPEAQGASAS 295

Query: 307 ASYSPDSSQIVFE--------SDREGKEQLYVMQSNGS-----DQKRISQDKEASYFDPV 353
             +SPDSS+I +         SDR     LYV  +NG      +  R++ D + +     
Sbjct: 296 PFFSPDSSKIAYVQMNGINYESDRS---ILYVADANGDKEKGFNITRLAGDWDRAPGSAK 352

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           WS  G+ I           +  +          + + +  ++      P G  L+     
Sbjct: 353 WSHDGETIYADAADLGHSRVFAVPLTAGDSYVPKNITDQGSVAGFYPLPDGSVLV--SDS 410

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASD 439
              +   ++++   G+  T +   A  +D
Sbjct: 411 KIWSSRDIHTVSGEGKGSTKVYFQANLAD 439



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 82/235 (34%), Gaps = 31/235 (13%)

Query: 175 SRILFVSESVV---SGIIKNSLCVMDRDGA-------NIRY---LTPSRDQILFEPRFSP 221
           S++ F+++ +    +      + ++   G        N R      P        P FSP
Sbjct: 241 SKVAFMTKDIGLPLANTTSTQIYLVPFTGTAKDAVPINPRSSSAKYPEAQGASASPFFSP 300

Query: 222 NQQKVAYATYD----DEDILRVYLMDTRIDRA-----PKRIGNFRSMILAPRFSSNGKRA 272
           +  K+AY   +    + D   +Y+ D   D+       +  G++     + ++S +G+  
Sbjct: 301 DSSKIAYVQMNGINYESDRSILYVADANGDKEKGFNITRLAGDWDRAPGSAKWSHDGETI 360

Query: 273 LISVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYS-PDSSQIVFESDREGKEQL 328
                      +++V L +      + +T+     ++  Y  PD S +V +S       +
Sbjct: 361 YADAADLGHSRVFAVPLTAGDSYVPKNITDQGS--VAGFYPLPDGSVLVSDSKIWSSRDI 418

Query: 329 YVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDG 380
           + +   G    ++        S    + S       ++  + E      V++  G
Sbjct: 419 HTVSGEGKGSTKVYFQANLADSELAGLSSADVSEFYYSSNTTENKQQAWVIRPAG 473


>gi|229082983|ref|ZP_04215403.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock4-2]
 gi|228700320|gb|EEL52886.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock4-2]
          Length = 486

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 72/173 (41%), Gaps = 19/173 (10%)

Query: 266 SSNGKRALISVQKDEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S++GK+ +        M      D+Y + +++   ++L     +  S  +SPD S+I + 
Sbjct: 31  SNDGKKVVFITTPSSNMADYINGDLYILHIKAGELQKLNVDKLLGGSVCFSPDGSKICYT 90

Query: 320 -SDREGKE--------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            S RE            L +   N  +  +   + +++     W+ +G  I         
Sbjct: 91  ASIREKDYYRNHIQDSTLEIYDMNTGEVIQPLTNFDSTVMPLQWTAKG--ILIRWQDKTN 148

Query: 371 FAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           + IG++ +DG+ E L  + D  +   + +  G  + +++    +T  ++Y  D
Sbjct: 149 YRIGLLAEDGTVEALSDKIDGFIMDASITKDGNHITYNKAITNET-FEIYLDD 200



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 81/217 (37%), Gaps = 24/217 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI----DRAPKRIGNFRSMI 260
            LT  +D  + E   S + +KV + T    ++      D  I        +++   + + 
Sbjct: 16  QLTDGKDFHIHEFDISNDGKKVVFITTPSSNMADYINGDLYILHIKAGELQKLNVDKLLG 75

Query: 261 LAPRFSSNGKRALISVQ-----------KDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +  FS +G +   +             +D  ++IY ++      + LTN     +   +
Sbjct: 76  GSVCFSPDGSKICYTASIREKDYYRNHIQDSTLEIYDMN-TGEVIQPLTNFDSTVMPLQW 134

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSG 368
           +     I+     +   ++ ++  +G+  + +S   +    D   +  G+ I + K  + 
Sbjct: 135 TAKG--ILIRWQDKTNYRIGLLAEDGT-VEALSDKIDGFIMDASITKDGNHITYNKAITN 191

Query: 369 EKFAIGVMKKDGSQERLLVED---SNLQAPTW-SPSG 401
           E F I +  K  + E    +    SN +  +W S  G
Sbjct: 192 ETFEIYLDDKKITDENSFFKGKLKSNREIISWKSSDG 228



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 16/121 (13%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLL-VEDSNL 392
           +++  K+    +   S  G  + F               + ++     + + L V+    
Sbjct: 16  QLTDGKDFHIHEFDISNDGKKVVFITTPSSNMADYINGDLYILHIKAGELQKLNVDKLLG 75

Query: 393 QAPTWSPSGRSLIFS---------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +  +SP G  + ++         R    D+  ++Y ++     + L N  +     QW 
Sbjct: 76  GSVCFSPDGSKICYTASIREKDYYRNHIQDSTLEIYDMNTGEVIQPLTNFDSTVMPLQWT 135

Query: 444 G 444
            
Sbjct: 136 A 136


>gi|329962031|ref|ZP_08300042.1| hypothetical protein HMPREF9446_01617 [Bacteroides fluxus YIT
           12057]
 gi|328530679|gb|EGF57537.1| hypothetical protein HMPREF9446_01617 [Bacteroides fluxus YIT
           12057]
          Length = 369

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 61/190 (32%), Gaps = 15/190 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALIS 275
           FSP+ + +    +  + +LR  L    I                PR   FS +GK A + 
Sbjct: 177 FSPDGKYIFATDFSADRLLRFVLHPKDIVPHLSAETIDIKADSGPRHLTFSPDGKYAYLI 236

Query: 276 VQKDEAMDIYSVDLQSNATER---LT-NTLFINISA--SYSPDSSQIVFESDR---EGKE 326
            +    +  +  D      E+   +T +T+    SA    SPD   + + S+R   +G  
Sbjct: 237 TELSGKVIAFRYD--DGKLEQMQTITADTVAARGSADIHLSPDGKYL-YASNRLQEDGIA 293

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
              V   NG+  K   Q           +P G  +           +          +  
Sbjct: 294 IFAVNPENGTLAKAGYQKTGIHPRHFNITPNGKYLLAACRDSNIIQVYERDATTGLLKDT 353

Query: 387 VEDSNLQAPT 396
            +D  +  P 
Sbjct: 354 HQDIEVDKPV 363



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 60/199 (30%), Gaps = 20/199 (10%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---ISVQKD 279
                +    D  +  V  +       P  +      I    FS +GK       S  + 
Sbjct: 135 GTMSVFGLRKDGTLAPVDTLFMGSATGPDTVRQIVPHIHCALFSPDGKYIFATDFSADRL 194

Query: 280 EAMDIYSVDLQSNATERL---TNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQS 333
               ++  D+       L   T  +  +      ++SPD       ++  GK   +    
Sbjct: 195 LRFVLHPKDI----VPHLSAETIDIKADSGPRHLTFSPDGKYAYLITELSGKVIAFRYDD 250

Query: 334 NGSDQ-KRISQDKEASYFDPVW--SPQGDLI-AFTKFSGEKFAIGVMKKDGSQERLLVED 389
              +Q + I+ D  A+        SP G  + A  +   +  AI  +  +          
Sbjct: 251 GKLEQMQTITADTVAARGSADIHLSPDGKYLYASNRLQEDGIAIFAVNPENGTLAKAGYQ 310

Query: 390 SNLQAPT---WSPSGRSLI 405
                P     +P+G+ L+
Sbjct: 311 KTGIHPRHFNITPNGKYLL 329



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 74/228 (32%), Gaps = 30/228 (13%)

Query: 227 AYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            Y     + I    +  +T        +       L P  S +GK      + +++    
Sbjct: 35  TYTNGTSKGIYTFRFNQETGAATPLSVVELPNPSYLTP--SEDGKFVYAVSEMNDSTAAL 92

Query: 286 SV---DLQSNATERLTNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRI 341
           S    D ++ +   L     +     Y   + + V  ++   G   ++ ++ +G+    +
Sbjct: 93  SALAFDKETGSLRLLNTQPTLGADPCYVATNGKEVLTANYSGGTMSVFGLRKDGTLAP-V 151

Query: 342 SQDKEASYFDPV-------------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                 S   P              +SP G  I  T FS ++    V+        L  E
Sbjct: 152 DTLFMGSATGPDTVRQIVPHIHCALFSPDGKYIFATDFSADRLLRFVLHPKDIVPHLSAE 211

Query: 389 DSNLQAPT------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             +++A +      +SP G+      +  G   +  Y    +G+ E +
Sbjct: 212 TIDIKADSGPRHLTFSPDGKYAYLITELSGKVIAFRYD---DGKLEQM 256


>gi|302535325|ref|ZP_07287667.1| peptide hydrolase [Streptomyces sp. C]
 gi|302444220|gb|EFL16036.1| peptide hydrolase [Streptomyces sp. C]
          Length = 611

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 60/184 (32%), Gaps = 9/184 (4%)

Query: 263 PRFS---SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           P ++    +  R+L         ++Y+ D  +    + T+        + SPD   I + 
Sbjct: 33  PEWAEDAPD--RSLFVSNATGTYELYAWDRATGTQRQATDRPNGTTDGALSPDGEWIWWF 90

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVM 376
           SD +G E          G   +  +   E SY         G  +       +   I V+
Sbjct: 91  SDTDGDEFGTWVRQPFAGGPDEPATPGLEPSYPAGLAIGRDGTAVVGRSTDEDGSTIHVV 150

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLINTPA 435
           +   + E +     +      S  G  L     + GD   S L  I L+G     ++   
Sbjct: 151 RPGAAPEVVYRHRESAGVGDLSYDGTLLAIEHTEHGDAMHSALRVITLDGATVAELDDSR 210

Query: 436 YASD 439
             ++
Sbjct: 211 GGTE 214



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 78/259 (30%), Gaps = 23/259 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +    R   +  P ++ +    +    +      +Y  D R     ++  +  +    
Sbjct: 19  PDWEKRFRAPRVGLPEWAEDAPDRSLFVSNATGTYELYAWD-RATGTQRQATDRPNGTTD 77

Query: 263 PRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNT--LFINISASYSPDSSQIVF 318
              S +G+        D       V         E  T           +   D + +V 
Sbjct: 78  GALSPDGEWIWWFSDTDGDEFGTWVRQPFAGGPDEPATPGLEPSYPAGLAIGRDGTAVVG 137

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGV 375
            S  E    ++V++        +      S      S  G L+A            A+ V
Sbjct: 138 RSTDEDGSTIHVVRP--GAAPEVVYRHRESAGVGDLSYDGTLLAIEHTEHGDAMHSALRV 195

Query: 376 MKKDGSQERLL------VEDSNLQAPTWSP---SGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +  DG+    L       E+  L+   ++P     R LI   ++ G     ++ +  +G 
Sbjct: 196 ITLDGATVAELDDSRGGTEELGLEVLGFAPVAGDTRLLI-GHQRRGRWEPMVWDV-ASGA 253

Query: 427 NETL-INTPAYASDPQWVG 444
            E L ++ P   S  +W  
Sbjct: 254 EEGLAVDLPGDVSA-EWYP 271



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 1/90 (1%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R LI  Q+    +    D+ S A E L   L  ++SA + PD S ++     E + +L+
Sbjct: 230 TRLLIGHQRRGRWEPMVWDVASGAEEGLAVDLPGDVSAEWYPDGSALLIAHSFEARSELW 289

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                  +  R+      +       P G 
Sbjct: 290 RYDLAARELVRVDT-PPGTVSGATARPDGT 318


>gi|222149789|ref|YP_002550746.1| hypothetical protein Avi_3798 [Agrobacterium vitis S4]
 gi|221736771|gb|ACM37734.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 328

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/283 (18%), Positives = 97/283 (34%), Gaps = 35/283 (12%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +IAH   D     +      + S +    +  V+     S  V    GA   Y     ++
Sbjct: 71  RIAH---DGTVTELAHAPRKWISVVAAGPQGAVAYGYGKSAFVRLASGAIHPY---EEER 124

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +    F+P   ++A + Y+      V L     +  P  +  ++       FS + +  
Sbjct: 125 TVEGLAFAPKGLRIAISRYNG-----VTLRFAAAEGKPVDL-EWKGAHTGVSFSPDNRFV 178

Query: 273 LISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           + ++Q++ A+  + +D   + T   R+T       S S+S     +       G     V
Sbjct: 179 VTTMQEN-ALHGWKLDGAGSDTRHMRMTGYPAKVKSISWSAKGKWLA----SSGAPAAIV 233

Query: 331 MQSN------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                     G   + +            + P  +++A     G    + V   DG +  
Sbjct: 234 WPFASKDGPMGKAPQELGTRANIMVTQVAFHPAEEVLAIGYIDG--MVLAVRLADGKEA- 290

Query: 385 LLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           LL         +  WS SG+ L F  +  GD G     ID++G
Sbjct: 291 LLRRPGKGAITSLGWSASGKLLAFGSE-AGDCG----VIDISG 328



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 40/102 (39%), Gaps = 3/102 (2%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            ++E +     ++P+G  IA ++++G        +    +   L         ++SP  R
Sbjct: 120 YEEERTVEGLAFAPKGLRIAISRYNGVTLRFAAAE---GKPVDLEWKGAHTGVSFSPDNR 176

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            ++ + +++   G KL     + R+  +   PA      W  
Sbjct: 177 FVVTTMQENALHGWKLDGAGSDTRHMRMTGYPAKVKSISWSA 218


>gi|148878210|gb|AAI45802.1| Wdr51b protein [Mus musculus]
          Length = 449

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 58/151 (38%), Gaps = 6/151 (3%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             ++ I +  FS N K+   +   D  + ++S+   + A   +     +  S  +SP  +
Sbjct: 16  GHKAAITSADFSPNCKQIA-TASWDTFLMLWSLKPHARAYRYV-GHKDVVTSLQFSPQGN 73

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S R+   +L+V+   G   +   +   A      +S  G L+  T    +   + 
Sbjct: 74  LLASAS-RDRTVRLWVLDRKGKSSE--FKAHTAPVRSVDFSADGQLLV-TASEDKSIKVW 129

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            M +      L      ++   +SP GR ++
Sbjct: 130 SMFRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 93/260 (35%), Gaps = 12/260 (4%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           +A  + D I +          +   F      + +      L +         Y      
Sbjct: 1   MASGLEDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHK 60

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            ++   +FSP    +A A+ D    +R++++D +   +  +       + +  FS++G +
Sbjct: 61  DVVTSLQFSPQGNLLASASRD--RTVRLWVLDRKGKSSEFKAHTAP--VRSVDFSADG-Q 115

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L++  +D+++ ++S+  Q      L         A +SPD   IV  S+    + + + 
Sbjct: 116 LLVTASEDKSIKVWSMFRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSE---DKTIKIW 171

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            +          D         ++P G  IA +  S     I  ++ +   +   V    
Sbjct: 172 DTTNKQCVNNFSDSVGFANFVDFNPNGTCIA-SAGSDHAVKIWDIRMNKLLQHYQVHSCG 230

Query: 392 LQAPTWSPSGRSLIFSRKKD 411
           +   ++ P G SL+ +    
Sbjct: 231 VNCLSFHPLGNSLVTASSDG 250



 Score = 39.6 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 50/122 (40%), Gaps = 7/122 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 SA +SP+  QI   +  +    L+ ++ +    + +    +       +SPQG+
Sbjct: 17  HKAAITSADFSPNCKQIA-TASWDTFLMLWSLKPHARAYRYV--GHKDVVTSLQFSPQGN 73

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           L+A          + V+ + G         + +++  +S  G+ L+ + +   D   K++
Sbjct: 74  LLASASRD-RTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASE---DKSIKVW 129

Query: 420 SI 421
           S+
Sbjct: 130 SM 131


>gi|148689696|gb|EDL21643.1| WD repeat domain 51B, isoform CRA_b [Mus musculus]
          Length = 471

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 58/151 (38%), Gaps = 6/151 (3%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             ++ I +  FS N K+   +   D  + ++S+   + A   +     +  S  +SP  +
Sbjct: 11  GHKAAITSADFSPNCKQIA-TASWDTFLMLWSLKPHARAYRYV-GHKDVVTSLQFSPQGN 68

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S R+   +L+V+   G   +   +   A      +S  G L+  T    +   + 
Sbjct: 69  LLASAS-RDRTVRLWVLDRKGKSSE--FKAHTAPVRSVDFSADGQLLV-TASEDKSIKVW 124

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            M +      L      ++   +SP GR ++
Sbjct: 125 SMFRQRFLYSLYRHTHWVRCAKFSPDGRLIV 155



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 90/254 (35%), Gaps = 12/254 (4%)

Query: 160 DDIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           D I +          +   F      + +      L +         Y       ++   
Sbjct: 2   DPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSL 61

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FSP    +A A+ D    +R++++D +   +  +       + +  FS++G + L++  
Sbjct: 62  QFSPQGNLLASASRD--RTVRLWVLDRKGKSSEFKAHTAP--VRSVDFSADG-QLLVTAS 116

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D+++ ++S+  Q      L         A +SPD   IV  S+    + + +  +    
Sbjct: 117 EDKSIKVWSMFRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSE---DKTIKIWDTTNKQ 172

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 D         ++P G  IA +  S     I  ++ +   +   V    +   ++
Sbjct: 173 CVNNFSDSVGFANFVDFNPNGTCIA-SAGSDHAVKIWDIRMNKLLQHYQVHSCGVNCLSF 231

Query: 398 SPSGRSLIFSRKKD 411
            P G SL+ +    
Sbjct: 232 HPLGNSLVTASSDG 245



 Score = 39.6 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 50/122 (40%), Gaps = 7/122 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 SA +SP+  QI   +  +    L+ ++ +    + +    +       +SPQG+
Sbjct: 12  HKAAITSADFSPNCKQIA-TASWDTFLMLWSLKPHARAYRYV--GHKDVVTSLQFSPQGN 68

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           L+A          + V+ + G         + +++  +S  G+ L+ + +   D   K++
Sbjct: 69  LLASASRD-RTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASE---DKSIKVW 124

Query: 420 SI 421
           S+
Sbjct: 125 SM 126


>gi|47059149|ref|NP_082016.1| POC1 centriolar protein homolog B [Mus musculus]
 gi|81913142|sp|Q8BHD1|POC1B_MOUSE RecName: Full=POC1 centriolar protein homolog B; AltName: Full=WD
           repeat-containing protein 51B
 gi|26337235|dbj|BAC32302.1| unnamed protein product [Mus musculus]
 gi|26340952|dbj|BAC34138.1| unnamed protein product [Mus musculus]
 gi|26354907|dbj|BAC41080.1| unnamed protein product [Mus musculus]
 gi|148689695|gb|EDL21642.1| WD repeat domain 51B, isoform CRA_a [Mus musculus]
          Length = 476

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 58/151 (38%), Gaps = 6/151 (3%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             ++ I +  FS N K+   +   D  + ++S+   + A   +     +  S  +SP  +
Sbjct: 16  GHKAAITSADFSPNCKQIA-TASWDTFLMLWSLKPHARAYRYV-GHKDVVTSLQFSPQGN 73

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S R+   +L+V+   G   +   +   A      +S  G L+  T    +   + 
Sbjct: 74  LLASAS-RDRTVRLWVLDRKGKSSE--FKAHTAPVRSVDFSADGQLLV-TASEDKSIKVW 129

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            M +      L      ++   +SP GR ++
Sbjct: 130 SMFRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 93/260 (35%), Gaps = 12/260 (4%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           +A  + D I +          +   F      + +      L +         Y      
Sbjct: 1   MASGLEDPILERSFKGHKAAITSADFSPNCKQIATASWDTFLMLWSLKPHARAYRYVGHK 60

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            ++   +FSP    +A A+ D    +R++++D +   +  +       + +  FS++G +
Sbjct: 61  DVVTSLQFSPQGNLLASASRD--RTVRLWVLDRKGKSSEFKAHTAP--VRSVDFSADG-Q 115

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L++  +D+++ ++S+  Q      L         A +SPD   IV  S+    + + + 
Sbjct: 116 LLVTASEDKSIKVWSMFRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSE---DKTIKIW 171

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            +          D         ++P G  IA +  S     I  ++ +   +   V    
Sbjct: 172 DTTNKQCVNNFSDSVGFANFVDFNPNGTCIA-SAGSDHAVKIWDIRMNKLLQHYQVHSCG 230

Query: 392 LQAPTWSPSGRSLIFSRKKD 411
           +   ++ P G SL+ +    
Sbjct: 231 VNCLSFHPLGNSLVTASSDG 250



 Score = 39.6 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 50/122 (40%), Gaps = 7/122 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 SA +SP+  QI   +  +    L+ ++ +    + +    +       +SPQG+
Sbjct: 17  HKAAITSADFSPNCKQIA-TASWDTFLMLWSLKPHARAYRYV--GHKDVVTSLQFSPQGN 73

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           L+A          + V+ + G         + +++  +S  G+ L+ + +   D   K++
Sbjct: 74  LLASASRD-RTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQLLVTASE---DKSIKVW 129

Query: 420 SI 421
           S+
Sbjct: 130 SM 131


>gi|320583663|gb|EFW97876.1| WD domain protein [Pichia angusta DL-1]
          Length = 312

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/215 (17%), Positives = 77/215 (35%), Gaps = 19/215 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L  + D ++   + SP+   +A A+ D    ++++ +        K +      I +  
Sbjct: 7   TLDKAHDALVASAKISPDGSLLATASTD--KTIKLWKISEAGVTYWKTLAGHTKGISSIE 64

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           F+ N K    S   D  + I+  D++     + L    F      +    S +V  S   
Sbjct: 65  FAPNSKYIA-SASDDLTIRIW--DVEGGELVQILRGHTFHVTVLKFHYRGSILVSGS--- 118

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ- 382
             E + V     +   ++            +S  G +I    + G    I +   +  Q 
Sbjct: 119 ADENIRVWDLRRAKCMKVLSAHSDPISSLDFSFDGTVIVSGSYDG---LIRLFDLETGQC 175

Query: 383 -ERLLVEDSNLQAP----TWSPSGRSLIFSRKKDG 412
            + L+ + S    P    T+SP+ + ++ S   DG
Sbjct: 176 LKTLIYDKSGSSYPVSHVTFSPNSKYIL-SSSLDG 209



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 63/167 (37%), Gaps = 13/167 (7%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             KG  +      S+ + S     ++ + D +G  +  +       +   +F      + 
Sbjct: 56  HTKGISSIEFAPNSKYIASASDDLTIRIWDVEGGELVQILRGHTFHVTVLKFHYRGSILV 115

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D+     + + D R  +  K +      I +  FS +G   ++S   D  + ++  
Sbjct: 116 SGSADE----NIRVWDLRRAKCMKVLSAHSDPISSLDFSFDGT-VIVSGSYDGLIRLF-- 168

Query: 288 DLQSNA-TERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLY 329
           DL++    + L      +       ++SP+S  I+  S  +G  +L+
Sbjct: 169 DLETGQCLKTLIYDKSGSSYPVSHVTFSPNSKYIL-SSSLDGFVRLW 214


>gi|294508424|ref|YP_003572482.1| Conserved hypothetical protein, secreted [Salinibacter ruber M8]
 gi|294344752|emb|CBH25530.1| Conserved hypothetical protein, secreted [Salinibacter ruber M8]
          Length = 372

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 68/199 (34%), Gaps = 7/199 (3%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +  + + +   V ++D        RI     M    RF+ +G+        D    ++ V
Sbjct: 147 FNLHGEPEPSTVSVVDPEAMTEVDRIETGI-MPHGSRFAPDGRTHYSVSMMDGT--LHEV 203

Query: 288 DLQSNATER-LTNTLFINISASY-SPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQD 344
           D  +    R LT         ++  P  S+   + +     E + V + + +  +R+   
Sbjct: 204 DALTGRVTRTLTTGEGTP-KPTWVDPHPSRPLAYVAHNGADEVVVVDRDDWAVTQRLPTG 262

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           +  + ++   +P G  +  +     +  I  ++      RL    +       SP  R  
Sbjct: 263 EGTAPYNLEVAPDGTTLVVSYKGTGETGIWNLETGERAARLSNTQAVTHGVVISPDSRYA 322

Query: 405 IFSRKKDGDTGSKLYSIDL 423
             S +  GD    +   DL
Sbjct: 323 FVSAEGRGDDPGAVDVFDL 341



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 8/162 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISV 276
           RF+P+ +     +  D  +  V  +  R+ R      G  +   + P  S   +      
Sbjct: 182 RFAPDGRTHYSVSMMDGTLHEVDALTGRVTRTLTTGEGTPKPTWVDPHPS---RPLAYVA 238

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                  +         T+RL         +   +PD + +V      G+  ++ +++ G
Sbjct: 239 HNGADEVVVVDRDDWAVTQRLPTGEGTAPYNLEVAPDGTTLVVSYKGTGETGIWNLET-G 297

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
               R+S + +A     V SP     AF    G     G + 
Sbjct: 298 ERAARLS-NTQAVTHGVVISPDSRY-AFVSAEGRGDDPGAVD 337


>gi|303312045|ref|XP_003066034.1| WD domain, G-beta repeat containing protein [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240105696|gb|EER23889.1| WD domain, G-beta repeat containing protein [Coccidioides posadasii
           C735 delta SOWgp]
          Length = 525

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 70/224 (31%), Gaps = 26/224 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVA----YATYDDEDI------------LRVYLMDT 244
              + +     + +   +FSP+   +A    Y       I              + + ++
Sbjct: 161 YKQKLVLKGHQRGVSAVQFSPDGSMIASCCKYLRLSPPFIGAIGLTREPAADGTIRVWNS 220

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +           I    +S +G     S   D+++ +++V                 
Sbjct: 221 STGKLIHTFEGHLGGISTLCWSPDGTFIA-SGSDDKSIRLWNVLTGKQHPTPFLGHHNYI 279

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SP  + +V  S     E +++     +   R             +   G LIA  
Sbjct: 280 YSIAFSPKGNMLVSGSY---DEAVFLWDVRSARVMRSLPAHSDPVAGIDFIRDGTLIASC 336

Query: 365 KFSGEKFAIGVMKKDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
              G    I +      Q  R LV + N  +    +SP+G+ ++
Sbjct: 337 ASDG---LIRIWDSATGQCLRTLVHEDNPPVMGVKFSPNGKYVL 377



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 58/178 (32%), Gaps = 9/178 (5%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID-RAP 250
           ++ V +     + +        +    +SP+   +A  + D      + L +     + P
Sbjct: 214 TIRVWNSSTGKLIHTFEGHLGGISTLCWSPDGTFIASGSDDK----SIRLWNVLTGKQHP 269

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                  + I +  FS  G   + S   DEA+ ++ V   +     L           + 
Sbjct: 270 TPFLGHHNYIYSIAFSPKGNMLV-SGSYDEAVFLWDV-RSARVMRSLPAHSDPVAGIDFI 327

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            D + I   +  +G  +++   + G   + +  +         +SP G  +      G
Sbjct: 328 RDGTLIASCAS-DGLIRIWD-SATGQCLRTLVHEDNPPVMGVKFSPNGKYVLAWTLDG 383



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 54/191 (28%), Gaps = 38/191 (19%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +   +  + A +FS +G     S  K   +    +         LT     +       
Sbjct: 166 VLKGHQRGVSAVQFSPDGSMIA-SCCKYLRLSPPFIGAIG-----LTREPAAD------- 212

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                           + V  S+        +          WSP G  IA +    +  
Sbjct: 213 --------------GTIRVWNSSTGKLIHTFEGHLGGISTLCWSPDGTFIA-SGSDDKSI 257

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            +  +   G Q        +    +  +SP G  L+      G     ++  D+  R+  
Sbjct: 258 RLWNV-LTGKQHPTPFLGHHNYIYSIAFSPKGNMLV-----SGSYDEAVFLWDV--RSAR 309

Query: 430 LINTPAYASDP 440
           ++ +    SDP
Sbjct: 310 VMRSLPAHSDP 320


>gi|153862517|gb|ABS52742.1| putative domain containing guanine nucleotide-binding protein
           [Theileria uilenbergi]
          Length = 328

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 86/261 (32%), Gaps = 37/261 (14%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                   RLWD+   + +  + F    +    +A   S D  Q I+G +          
Sbjct: 90  SGSWDGTLRLWDLVKAESV--RVFNGHKSDVNSVA--FSPDNRQIISGSR---------- 135

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                       L     D       +   D +    RFSP+ ++  + +   + +++V+
Sbjct: 136 -------DKTIKLWNTLADCKYTITESTHSDWVSCV-RFSPSGKEPIFVSGGWDKLIKVW 187

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             D R       +     ++ +   S +G     S  KD    ++ +  ++N+   L   
Sbjct: 188 --DLRTCHLKHTLYGHEGVVFSVSISPDGSLCA-SGGKDGVARLWDM-KEANSLHLLDAG 243

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDP-----VW 354
             IN    +SP +  +   +DR     + +      +    I  D++     P      W
Sbjct: 244 STINA-LCFSPCNYWLCAATDRA----IKIWDLENKNILAEIHNDRQRKVGLPWCVSLCW 298

Query: 355 SPQGDLIAFTKFSGEKFAIGV 375
           SP G ++      G  +   V
Sbjct: 299 SPDGRVLYAGSTDGSIYVYQV 319



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 87/248 (35%), Gaps = 24/248 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    +L + D   A    +       +    FSP+ +++   + D      + L +T 
Sbjct: 90  SGSWDGTLRLWDLVKAESVRVFNGHKSDVNSVAFSPDNRQIISGSRDK----TIKLWNTL 145

Query: 246 ID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATER-LTNTLF 302
            D +           +   RFS +GK  +          +  V DL++   +  L     
Sbjct: 146 ADCKYTITESTHSDWVSCVRFSPSGKEPIFVS--GGWDKLIKVWDLRTCHLKHTLYGHEG 203

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +  S S SPD S       ++G  +L+ M+   S       D  ++     +SP    + 
Sbjct: 204 VVFSVSISPDGSLCA-SGGKDGVARLWDMKEANSLH---LLDAGSTINALCFSPCNYWL- 258

Query: 363 FTKFSGEKFAIG------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
               +     I       ++ +  +  +  V      +  WSP GR ++++   DG    
Sbjct: 259 -CAATDRAIKIWDLENKNILAEIHNDRQRKVGLPWCVSLCWSPDGR-VLYAGSTDGS--I 314

Query: 417 KLYSIDLN 424
            +Y +  N
Sbjct: 315 YVYQVSRN 322


>gi|145352960|ref|XP_001420801.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581036|gb|ABO99094.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 376

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 32/258 (12%), Positives = 75/258 (29%), Gaps = 25/258 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +V S      + + D +                +  FS +   V   + D      + L
Sbjct: 106 FTVASAGEDKVIAMFDTNTGARTSELTGLLGAALDVTFSADDSLVLGTSTD----CSLQL 161

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    R   R+      + + R S    +  IS  +D  + ++ ++     +  LT++ 
Sbjct: 162 WDALTGRVRHRLTGHAQKVTSARISQIDAKRAISCSQDRNVKLWDLNRGHVTSSMLTSSG 221

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             ++   +  +  Q  +    +G   +        +  R ++           +P  + I
Sbjct: 222 VYSV--VFDANEQQ-AYSGHFDGA--IRAWDLRAGNVARETKVHNGLITAVFDTPNQNEI 276

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                      + ++                   ++   P  SP G+ +       G   
Sbjct: 277 LTNSRDNT---LKLVDIRTMDVVQTFSAPKYRVGTDWSNPCVSPDGQHIA-----SGGAD 328

Query: 416 SKLYSIDLNGRNETLINT 433
             L+   + G    L+ T
Sbjct: 329 GALFIWRVQGG--RLMTT 344


>gi|326793835|ref|YP_004311655.1| oligogalacturonide lyase [Marinomonas mediterranea MMB-1]
 gi|326544599|gb|ADZ89819.1| Oligogalacturonide lyase [Marinomonas mediterranea MMB-1]
          Length = 382

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 69/228 (30%), Gaps = 37/228 (16%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDE---AMD 283
           +A +  ++     +           I +    +  P +   +        +         
Sbjct: 158 FAEFYHKNPRCRLISIDMQTGERTVILDQNVWMGHPLYRPFDDNTVAFCHEGPHDLIETR 217

Query: 284 IYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQ 338
           ++ V+       ++   T          + PD S+++F S   G+ +  LY +  N  ++
Sbjct: 218 MWFVNEDGTDVRKVYEQTKEESC-THEFFVPDGSKMMFVSYTRGETERWLYSVDPNTLEE 276

Query: 339 KRISQDKEASYFDPVWSPQGDLIA---------FTKFSG----EKFAIGVMKKDGSQERL 385
           KR +     S+    +   G L+              SG        I V        + 
Sbjct: 277 KRETIMPACSHLMSNY--DGSLVVGDGSGTPVDVADSSGHELENDDNIYVFDLKAGTTKA 334

Query: 386 L------------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +                N   P+++P  + +++S   +G     + +I
Sbjct: 335 VCQHKTSWEVLNNSRQVNHPHPSFTPDSKGVLYSSDMNGTPALYIAAI 382



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 84/247 (34%), Gaps = 32/247 (12%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  FS N  K+ +A  D +     YLMD     A +              ++ G  
Sbjct: 36  NYFYQKCFSENGDKLLFAG-DFDGPWNYYLMDLDEQSAVQLTQGTGDNTFGGFLTTQGDA 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASY--SPDSSQIV----------- 317
            +          +  VD+++     +           ++  + D ++IV           
Sbjct: 95  LIF---MKNNHALIRVDIKTQEHHTIYEVEKGWVGYGTWVANRDCTKIVGIEIKAEDHMP 151

Query: 318 ------FESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGE 369
                 F        +  ++  +  + ++ +  D+      P++ P   + +AF      
Sbjct: 152 LTDWKKFAEFYHKNPRCRLISIDMQTGERTVILDQNVWMGHPLYRPFDDNTVAFCHEGPH 211

Query: 370 KF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 +  + +DG+  R + E +  ++ T   + P G  ++F     G+T   LYS+D 
Sbjct: 212 DLIETRMWFVNEDGTDVRKVYEQTKEESCTHEFFVPDGSKMMFVSYTRGETERWLYSVDP 271

Query: 424 NGRNETL 430
           N   E  
Sbjct: 272 NTLEEKR 278


>gi|321455993|gb|EFX67111.1| hypothetical protein DAPPUDRAFT_302220 [Daphnia pulex]
          Length = 617

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/174 (13%), Positives = 54/174 (31%), Gaps = 13/174 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +       ++  RFSP+  K+A  + D   ++     +       K +      +    
Sbjct: 276 QVLNDHCDEVWFCRFSPDGTKLATGSKDTTVMIWNVDPENCSLTHLKTLEGHSYGVAYLS 335

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDR 322
           +S +          D+  +++   +++       +    +   S S+ PD  + V    R
Sbjct: 336 WSPDSSHLAACG-PDDCPELWVWQVETGQLRVKLSHASEDSLTSCSWHPDGRRFVAGGCR 394

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFSGEKFA 372
               Q Y+    G+  +  S +         W   G  +       +  G  F 
Sbjct: 395 G---QFYLCDLEGNVLE--SWEG-VRVQALAWKADGKTVLAADTHHRIRGYNFD 442



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 12/123 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTK 365
            +SPD +++     ++    ++ +         +   +  SY      WSP    +A   
Sbjct: 289 RFSPDGTKLA-TGSKDTTVMIWNVDPENCSLTHLKTLEGHSYGVAYLSWSPDSSHLAACG 347

Query: 366 FSGEKFAIGVMKKDGSQERL-LVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  + V + +  Q R+ L   S     + +W P GR  +      G    + Y  D
Sbjct: 348 PDDCP-ELWVWQVETGQLRVKLSHASEDSLTSCSWHPDGRRFV-----AGGCRGQFYLCD 401

Query: 423 LNG 425
           L G
Sbjct: 402 LEG 404


>gi|305663236|ref|YP_003859524.1| WD-40 repeat protein [Ignisphaera aggregans DSM 17230]
 gi|304377805|gb|ADM27644.1| WD-40 repeat protein [Ignisphaera aggregans DSM 17230]
          Length = 816

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 96/304 (31%), Gaps = 62/304 (20%)

Query: 139 IIGKKFFSSP---ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           ++ K +   P   + WR + H   D +Y       G            + +G    S+ V
Sbjct: 25  VLAKIYTGPPYISSLWRFV-HDYLDYVYSIAWSPDG----------SRLAAGGSGGSIVV 73

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------YATYDDEDILRVYLMDTRIDRA 249
           +  DG  +          +    +SP+  ++A      Y      D   V    +     
Sbjct: 74  LSADGKAVWGPKKIVTSDILAIAWSPDGSRIAVGAGYGYIVAVSADRGEVLWQISLA--- 130

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN----- 304
            ++       +++  ++SN    +I+V K  +  I  +    +     +   + +     
Sbjct: 131 -QQTTCGSPSVVSVTWTSN---RIIAVTKSASCTILIISPDGDILWIWSLGDYSDKIKWS 186

Query: 305 --ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----DQKRISQDKEASY-----FDP 352
               AS SP  +++   S       + V           +++  S +   +      +  
Sbjct: 187 GVYRASISPKGTEVALVS--GDNYYITVFSLTQGKVVWENKQCFSTEVYGARDCKLIYAL 244

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------TWSPSG 401
            WSP G  IA     G      V   + S  R+L     + +P            WSP G
Sbjct: 245 AWSPDGSRIAVGLSDGS-----VTVVNTSDGRMLWRREGVFSPPSISWYYWYLIDWSPDG 299

Query: 402 RSLI 405
             ++
Sbjct: 300 SKIV 303



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 63/200 (31%), Gaps = 36/200 (18%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-------SMILAPRFS 266
           ++    SP   +VA  + D+  I    L   ++    K+  +          +I A  +S
Sbjct: 188 VYRASISPKGTEVALVSGDNYYITVFSLTQGKVVWENKQCFSTEVYGARDCKLIYALAWS 247

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----------YSPDSSQI 316
            +G R  + +       + + D       R      +    S          +SPD S+I
Sbjct: 248 PDGSRIAVGLSDGSVTVVNTSD--GRMLWR---REGVFSPPSISWYYWYLIDWSPDGSKI 302

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EK 370
           V          + V      +   +      S     WSP GD IA              
Sbjct: 303 VVR-----GFDVVVASLVSGE---VLWRYSISPISIAWSPTGDAIAVGGSDYVYLFPVGN 354

Query: 371 FAIGVMKKDGSQERLLVEDS 390
           + +  +    ++ R++V D 
Sbjct: 355 YTLIYINAPYAKTRVVVSDG 374



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 32/193 (16%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS----NA 293
           ++Y     I    + + ++   + +  +S +G R            I  +          
Sbjct: 28  KIYTGPPYISSLWRFVHDYLDYVYSIAWSPDGSRLA---AGGSGGSIVVLSADGKAVWGP 84

Query: 294 TERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ------KRISQDKE 346
            + +T+  L I    ++SPD S+I   +   G   +  + ++  +        + +    
Sbjct: 85  KKIVTSDILAI----AWSPDGSRIAVGA---GYGYIVAVSADRGEVLWQISLAQQTTCGS 137

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--------SNLQAPTWS 398
            S     W+    +IA TK +     I ++  DG    +            S +   + S
Sbjct: 138 PSVVSVTWTSN-RIIAVTKSA--SCTILIISPDGDILWIWSLGDYSDKIKWSGVYRASIS 194

Query: 399 PSGRSLIFSRKKD 411
           P G  +      +
Sbjct: 195 PKGTEVALVSGDN 207



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 15/94 (15%)

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG----SQERLLVEDSNLQAP 395
           R   D     +   WSP G  +A     G   +I V+  DG      ++++  D    A 
Sbjct: 41  RFVHDYLDYVYSIAWSPDGSRLA---AGGSGGSIVVLSADGKAVWGPKKIVTSDILAIA- 96

Query: 396 TWSPSGRSLI------FSRKKDGDTGSKLYSIDL 423
            WSP G  +       +      D G  L+ I L
Sbjct: 97  -WSPDGSRIAVGAGYGYIVAVSADRGEVLWQISL 129


>gi|262194567|ref|YP_003265776.1| WD40 repeat, subgroup [Haliangium ochraceum DSM 14365]
 gi|262077914|gb|ACY13883.1| WD40 repeat, subgroup [Haliangium ochraceum DSM 14365]
          Length = 1484

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 77/253 (30%), Gaps = 25/253 (9%)

Query: 142  KKFFSSPASWRKIAHTI----------SDDIYQSITGEKGDFNSRILFVSESVV-SGIIK 190
            +         R +A  +            ++ + + G  G   +           SG   
Sbjct: 1204 RAVAGGADGHRALAGRMNGGVEVWDLRCAELVRMLVGHSGAVEAVAWSTDGRRALSGAWD 1263

Query: 191  NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             ++   D +        P  +     P  S N+    +     E    V   D    R  
Sbjct: 1264 GTVKAWDVESGRELATCPGFEDWQAAPVCSLNE----HFALAGESNGTVRAWDVSTGRCV 1319

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              +      +LA   S++G+R ++S   D  + ++ V     A   L +      + + S
Sbjct: 1320 MTLSAHTKEVLAVAASADGRR-VVSGGDDGTVRVWDV-ASGQAVATLASGAGWVTAVACS 1377

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             D  ++V   + +G  +L V  ++   +                S  G  +A    +G K
Sbjct: 1378 RDGRRVV-AGENDG--RLRVWDADSGQEVATLSGHSGEIAAVACSADGRRVA----AGGK 1430

Query: 371  FAIGVM-KKDGSQ 382
              I  M   D  +
Sbjct: 1431 DGIVTMWDADSGR 1443



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 62/188 (32%), Gaps = 12/188 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G    ++   D           +  + +     S + ++V        D   V + D  
Sbjct: 1301 AGESNGTVRAWDVSTGRCVMTLSAHTKEVLAVAASADGRRVV----SGGDDGTVRVWDVA 1356

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +A   + +    + A   S +G+R +++ + D  + ++  D        L+       
Sbjct: 1357 SGQAVATLASGAGWVTAVACSRDGRR-VVAGENDGRLRVWDAD-SGQEVATLSGHSGEIA 1414

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            + + S D  ++       GK+ +  M    S +   S   +A+ +    +  G   A   
Sbjct: 1415 AVACSADGRRVA----AGGKDGIVTMWDADSGRCLASFPADAAVYACALA--GSEHAVVS 1468

Query: 366  FSGEKFAI 373
                +  +
Sbjct: 1469 DEFGRVHL 1476



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 64/201 (31%), Gaps = 14/201 (6%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VSG    ++ V D DG           + +     S + ++    + D    ++V+   +
Sbjct: 920  VSGGEDGTVRVWDVDGGEELATLSGHAEAVNAVACSADGRRAVSGSDD--GTVKVWHAGS 977

Query: 245  RID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
              D    + +      + A   S++G+R ++S   D  +  +  D   +    L      
Sbjct: 978  GNDWSELRELPGHIGAVNAVACSADGQR-VMSGGDDGTVLAWDAD-SGDEVASLPARTGW 1035

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                + S D  ++V   D      + V   NG    +  + +         S  G     
Sbjct: 1036 VQGLACSADGRRVVARYD---DGAVSVWDVNGGKGVKDMEAQLKGGRAVACSQDGRYAVL 1092

Query: 364  TKFSGEKFAI-GVMKKDGSQE 383
                 + F +  V   D  Q 
Sbjct: 1093 -----DGFEVMRVWDLDSGQR 1108



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 41/288 (14%), Positives = 84/288 (29%), Gaps = 44/288 (15%)

Query: 119  EGKDRLRVE------FRLWDVKDRKQIIG------------------KKFFSSPASWRKI 154
                RL V        R+WDV   +++                    +    S     K+
Sbjct: 913  SADGRLAVSGGEDGTVRVWDVDGGEELATLSGHAEAVNAVACSADGRRAVSGSDDGTVKV 972

Query: 155  AHTISDDIYQSITGEKGDFNSRILFV----SESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
             H  S + +  +    G   +          + V+SG    ++   D D  +     P+R
Sbjct: 973  WHAGSGNDWSELRELPGHIGAVNAVACSADGQRVMSGGDDGTVLAWDADSGDEVASLPAR 1032

Query: 211  DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
               +     S + ++V        D   V + D    +  K +        A   S +G+
Sbjct: 1033 TGWVQGLACSADGRRVV----ARYDDGAVSVWDVNGGKGVKDMEAQLKGGRAVACSQDGR 1088

Query: 271  RALISVQKDEAMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGKEQ 327
             A++    D    +   DL S   +R+ +         + + S D ++ V         +
Sbjct: 1089 YAVL----DGFEVMRVWDLDSG--QRVADYFSLEEDEGAVACSADGTRAVLG---GSSGR 1139

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            ++V +   S+   +             S     +      G      +
Sbjct: 1140 VFVWEVASSEPGEVFFGHTERVNAVACSADARRVLSGGIDGTVKVWAI 1187



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 45/337 (13%), Positives = 88/337 (26%), Gaps = 37/337 (10%)

Query: 115  RVIKEGKDRLRV-----EFRLWDVKDRKQII--------GKKFFSSPASWRKIAHTISDD 161
             V      R  V       R+WD+   +++               S    R +    S  
Sbjct: 1080 AVACSQDGRYAVLDGFEVMRVWDLDSGQRVADYFSLEEDEGAVACSADGTRAVLGGSSGR 1139

Query: 162  IY--QSITGEKG-DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            ++  +  + E G  F      V+    S   +  L     DG    +      Q      
Sbjct: 1140 VFVWEVASSEPGEVFFGHTERVNAVACSADARRVLSG-GIDGTVKVWAIGRECQTAAHGM 1198

Query: 219  FSPNQQKVAYATYDDEDILR-----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            F  + + VA        +       V + D R     + +      + A  +S++G+R  
Sbjct: 1199 FGEDVRAVAGGADGHRALAGRMNGGVEVWDLRCAELVRMLVGHSGAVEAVAWSTDGRR-A 1257

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +S   D  +  + V+                 +   S  +       +  G  + +    
Sbjct: 1258 LSGAWDGTVKAWDVE-SGRELATCPGFEDWQAAPVCS-LNEHFALAGESNGTVRAW--DV 1313

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            +                    S  G  +      G+   + V      Q    +      
Sbjct: 1314 STGRCVMTLSAHTKEVLAVAASADGRRVV---SGGDDGTVRVWDVASGQAVATLASGAGW 1370

Query: 394  APTW--SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                  S  GR ++      G+   +L   D +   E
Sbjct: 1371 VTAVACSRDGRRVV-----AGENDGRLRVWDADSGQE 1402


>gi|242777542|ref|XP_002479055.1| WD repeat protein [Talaromyces stipitatus ATCC 10500]
 gi|218722674|gb|EED22092.1| WD repeat protein [Talaromyces stipitatus ATCC 10500]
          Length = 519

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 67/208 (32%), Gaps = 14/208 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              ++L     + +   RFSP++  +A           + + DT   +         + I
Sbjct: 163 YVQKHLLKGHIRGVSAVRFSPDRTMIA----SGGADGTLKVWDTLTGKLIHSFEGHLAGI 218

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S + +    +   D+ + +++           +       S ++SP  + +   S
Sbjct: 219 STVAWSPDNETIA-TGSDDKTIRLWNALTGKAHPRAFSGHHNYVYSIAFSPKGNILASGS 277

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E +++     +   R                 G L+      G    I +     
Sbjct: 278 Y---DEAVFLWDVRTAKVMRSLPAHSDPVAGIDVCHDGTLVVSCSSDG---LIRIWDTMT 331

Query: 381 SQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
            Q  R LV + N  + A  +SP+ + ++
Sbjct: 332 GQCLRTLVHEDNPPVMAVRFSPNSKYVL 359



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 62/195 (31%), Gaps = 9/195 (4%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +G    R       + SG    +L V D     + +        +    +SP+ + +A
Sbjct: 172 HIRGVSAVRFSPDRTMIASGGADGTLKVWDTLTGKLIHSFEGHLAGISTVAWSPDNETIA 231

Query: 228 YATYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             + D      + L +    +  P+      + + +  FS  G   L S   DEA+ ++ 
Sbjct: 232 TGSDDK----TIRLWNALTGKAHPRAFSGHHNYVYSIAFSPKGN-ILASGSYDEAVFLWD 286

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V         L              D + +V  S  +G  +++     G   + +  +  
Sbjct: 287 VRTA-KVMRSLPAHSDPVAGIDVCHDGTLVVSCSS-DGLIRIWDT-MTGQCLRTLVHEDN 343

Query: 347 ASYFDPVWSPQGDLI 361
                  +SP    +
Sbjct: 344 PPVMAVRFSPNSKYV 358


>gi|70986635|ref|XP_748808.1| vegetative incompatibility WD repeat protein [Aspergillus fumigatus
           Af293]
 gi|66846438|gb|EAL86770.1| vegetative incompatibility WD repeat protein, putative [Aspergillus
           fumigatus Af293]
          Length = 376

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/323 (16%), Positives = 100/323 (30%), Gaps = 50/323 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI---SDDIYQSITGEK 170
           G+++  G D   +  +LWD                     + HT+   SD I      + 
Sbjct: 65  GQLLASGSDDKTI--KLWDPTTG----------------ALKHTLVGHSDSILSVAFSQD 106

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F            SG    ++ + D     +++        +    FS + Q +A  +
Sbjct: 107 GQFL----------ASGSDDETIKLWDPTTGALKHTLEGHSDSILSVAFSQDGQFLASGS 156

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +D      + L D         +      + +  F  +  + L S   D+   ++  D  
Sbjct: 157 HDK----TIKLWDPTTGNLKHTLEGHSDWVRSVAFWKD-SQLLASGSDDKTTRLW--DPT 209

Query: 291 SNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           + A +  L        S ++S D   +   SD    E + +     S   +  +    S 
Sbjct: 210 TGALKHTLEGHSDSIRSVAFSQDGQLLASGSD---DETVKLWDPTTSFLMQTLEGHSDSV 266

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFS 407
           +   +S  G L+A          I +        +  +E  +    +  +S + R L   
Sbjct: 267 WTVAFSQDGQLLASGSRDRT---IKLWDPAIGAVKHTLEGHSDWVRSVAFSQNSRFLASG 323

Query: 408 RKKDGDTGSKLYSIDLNGRNETL 430
                D   KL+         TL
Sbjct: 324 SY---DKTIKLWDPTTGNLKHTL 343



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/212 (13%), Positives = 60/212 (28%), Gaps = 33/212 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +      + +   P +     KV                +       + +G     +
Sbjct: 13  FTPQKALNRGNFVRNPPGWLSKGPKV----------------EETWSPELQTVGGLSHWV 56

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
            +  FS +G+    S   D+ + ++  D  + A +  L       +S ++S D   +   
Sbjct: 57  WSVAFSQDGQLLA-SGSDDKTIKLW--DPTTGALKHTLVGHSDSILSVAFSQDGQFLASG 113

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SD    E + +        K   +    S     +S  G  +A          I +    
Sbjct: 114 SD---DETIKLWDPTTGALKHTLEGHSDSILSVAFSQDGQFLASGSHDKT---IKLWDPT 167

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
               +  +E  +          RS+ F +   
Sbjct: 168 TGNLKHTLEGHSDWV-------RSVAFWKDSQ 192


>gi|229098827|ref|ZP_04229764.1| TolB domain protein [Bacillus cereus Rock3-29]
 gi|229117853|ref|ZP_04247216.1| TolB domain protein [Bacillus cereus Rock1-3]
 gi|228665585|gb|EEL21064.1| TolB domain protein [Bacillus cereus Rock1-3]
 gi|228684575|gb|EEL38516.1| TolB domain protein [Bacillus cereus Rock3-29]
          Length = 402

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 80/232 (34%), Gaps = 57/232 (24%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           + + +  P++S + + +AY     E  L +Y +     +  K++  F S     ++S   
Sbjct: 42  KGEYITGPKWSHDGEWLAYVKGKKEGSLELYRL-----KDGKKVTPFHSEASNYQWSPTE 96

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----SYSPDSSQIVFESDREG 324
                         + + D++        NT F N+SA     ++ PD  +    S+   
Sbjct: 97  NIIAFIFTG----TLNTFDVEKK------NTDFENVSAGVGDYAWYPDGKKFFVSSEAHL 146

Query: 325 KEQLYVMQSNGSDQKRISQDKEAS---------------------YFDPVWSPQGDLIAF 363
               +     G+    + +D   +                          WSP    I+F
Sbjct: 147 LPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHDDFLALVASGFRWSPDQKWISF 202

Query: 364 -----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWSPSGRSLIF 406
                  +S +   + +++ DGS+     ++L+     +   W+P+   L +
Sbjct: 203 LAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK---WAPANNILAY 251



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAF +       +        +E+ L +   +  P WS  G  L + + K  +   +LY
Sbjct: 20  KIAFIRHHDLWIKVE------GKEKQLTKGEYITGPKWSHDGEWLAYVKGKK-EGSLELY 72

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 73  RLK-DGKKVTPFHS--EASNYQWSP 94



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 77/202 (38%), Gaps = 29/202 (14%)

Query: 218 RFSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           R+SP+Q+ +++        + D   +  V    +R ++  + + N +    AP       
Sbjct: 192 RWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFKWAPA-----N 246

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREG- 324
             L  ++    + + +  L+      L     T   +++   ++  D+  IV  +   G 
Sbjct: 247 NILAYIEGSGRVALENKHLKVKELPALQQNTFTPKGYVDWDFTWKNDNVIIVSRAKEAGI 306

Query: 325 --------KEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                      LY + S   +Q RI+        + P++  + + + + +   +K  + +
Sbjct: 307 ETPPEKRPLPSLYEIDSTSDEQHRITKPPHRQGDYHPLFMNKSNQLIWIRSDRKKADVWL 366

Query: 376 MKKDGSQERLLVEDSNLQAPTW 397
             KDG  E   +E  N+  P W
Sbjct: 367 AHKDGKHEMKWIE--NIDVPEW 386


>gi|218129304|ref|ZP_03458108.1| hypothetical protein BACEGG_00881 [Bacteroides eggerthii DSM 20697]
 gi|217988481|gb|EEC54802.1| hypothetical protein BACEGG_00881 [Bacteroides eggerthii DSM 20697]
          Length = 738

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 40/176 (22%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++ ++   ++     + V          P +  +  S      FS +G + LI+ +    
Sbjct: 59  DKTQIIKYSFKTGKPVEVLFDAATARECPFKKFDSYS------FSPDGSKLLIATETTPI 112

Query: 282 MD--------IYSV--DLQSN---ATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                     IYS+  +L        E+L++         +SPD  Q+ F  D       
Sbjct: 113 YRRSYTAVHYIYSLKRNLDGKINNVVEKLSDG-GPQQIPVFSPDGYQVAFVRD---NNIF 168

Query: 329 YVMQSNGSDQKRISQDKEAS---YFDPVW--------------SPQGDLIAFTKFS 367
            V    G+ + ++++D + +      P W              SP   ++AF +F 
Sbjct: 169 LVKLLYGNSESQVTEDGKRNEVLNGIPDWVYEEEFAFNRALEFSPDSKMLAFIRFD 224



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 56/168 (33%), Gaps = 37/168 (22%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYL-----------MDTRIDRAPKRIGNFRSMILAPRFS 266
            FSP+  K+  AT       R Y            +D +I+   +++ +     + P FS
Sbjct: 95  SFSPDGSKLLIATETTPIYRRSYTAVHYIYSLKRNLDGKINNVVEKLSDGGPQQI-PVFS 153

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------------------FINISAS 308
            +G +      +D  + +  + L  N+  ++T                       N +  
Sbjct: 154 PDGYQVAFV--RDNNIFLVKL-LYGNSESQVTEDGKRNEVLNGIPDWVYEEEFAFNRALE 210

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS----QDKEASYFDP 352
           +SPDS  + F    E +   Y       +   ++       E +Y  P
Sbjct: 211 FSPDSKMLAFIRFDEKEVPSYTFPVFAGEAPHMTPYEKYPGEYTYKYP 258



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 42/145 (28%), Gaps = 30/145 (20%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDP-------VWSPQGDLI--------AFTKFSGE 369
           K Q+            +  D   +   P        +SP G  +         + +    
Sbjct: 60  KTQIIKYSFKTGKPVEVLFDAATARECPFKKFDSYSFSPDGSKLLIATETTPIYRRSYTA 119

Query: 370 KFAIGVM--KKDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY----- 419
              I  +    DG        L +    Q P +SP G  + F R  +      LY     
Sbjct: 120 VHYIYSLKRNLDGKINNVVEKLSDGGPQQIPVFSPDGYQVAFVRDNNIFLVKLLYGNSES 179

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+   ++N       P WV 
Sbjct: 180 QVTEDGKRNEVLN-----GIPDWVY 199



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 45/119 (37%), Gaps = 2/119 (1%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F S++ G   LY     G+  K+++           + P+ D   F+          + K
Sbjct: 357 FVSEKSGYNHLYWYSIGGNLIKQVTSGPYEVQDFLGYDPEDDCFYFSSNEESPLRSAIYK 416

Query: 378 KDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            D   +++ L   +   +  +S   +  + +R  + DT + +   D  G+  T +   A
Sbjct: 417 IDRKGKKIKLSSQAGTNSAQFSTDMKYFM-NRYSNLDTPTVITLNDNTGKTLTTLVDNA 474


>gi|150006357|ref|YP_001301101.1| dipeptidyl aminopeptidase [Bacteroides vulgatus ATCC 8482]
 gi|149934781|gb|ABR41479.1| dipeptidyl aminopeptidase [Bacteroides vulgatus ATCC 8482]
          Length = 743

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 62/212 (29%), Gaps = 65/212 (30%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDR-----EGKEQLYVMQSNG 335
                ++ Q+     + N         +S D+S++ ++ + R     + +   +V+    
Sbjct: 82  PANMLLNPQTGKPISVRNF-------VFSEDNSKVLIYTNTRRVWRYDTRGDYWVLNLKD 134

Query: 336 SDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
              +++     EA+     +SP    +A+   +     I V      +   L +D N + 
Sbjct: 135 GKLQQLGKSLPEATLMFAKFSPDASRVAYVSRN----NIYVESLVDGKINQLTQDGNNEI 190

Query: 394 -----------------APTWSPSGRSLIFS-RKKDGDTGSKLYS--------------- 420
                               WSP G+ + +      G     + +               
Sbjct: 191 VNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYP 250

Query: 421 -------------IDLNGRNETLINTPAYASD 439
                        +  +G N T +  P  A +
Sbjct: 251 KAGTANSAVKVGYVSADGGNTTWLALPGDARN 282



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 106/322 (32%), Gaps = 59/322 (18%)

Query: 174 NSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQ 223
            SR+ +VS +   V  ++   +  + +DG N   +       ++E         R+SP+ 
Sbjct: 158 ASRVAYVSRNNIYVESLVDGKINQLTQDGNNE--IVNGTFDWVYEEEFNCRDGFRWSPDG 215

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRSMILAPRFSSNG---KRAL 273
           Q +AY   D +      +++      PK       + G   S +     S++G       
Sbjct: 216 QYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWLA 275

Query: 274 --------ISVQKDEAMDIYSVDLQSNATERLTNTLFI---------------------- 303
                      + +       + +Q     + TN ++I                      
Sbjct: 276 LPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLET 335

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N +  +   +    +ES+R+G   LY +  +G + K I+Q       +         + F
Sbjct: 336 NDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKGFVYF 395

Query: 364 TKFSGEKFAIGVMKK----DGSQERL-LVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSK 417
                      + +     +G  +RL  V+ S       SPSG+  +      +      
Sbjct: 396 IASPDNFTQRYLYRARLFGNGEVKRLSPVDQSGQHRYIMSPSGKWAVHTFSNSETPPVID 455

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           + S   + ++  LI   A A +
Sbjct: 456 MVSFPAH-KSIRLITDNAKAKE 476



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 92/316 (29%), Gaps = 61/316 (19%)

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---EDI 236
           +  V     +    V++ +DG   +      +  L   +FSP+  +VAY + ++   E +
Sbjct: 115 TRRVWRYDTRGDYWVLNLKDGKLQQLGKSLPEATLMFAKFSPDASRVAYVSRNNIYVESL 174

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMIL--------APRFSSNGKRALIS---VQKDEAMDIY 285
           +   +     D   + +      +           R+S +G+         Q     DI 
Sbjct: 175 VDGKINQLTQDGNNEIVNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDII 234

Query: 286 S----------------------------VDLQSNATERLTNTLFINISASYSPD----- 312
           +                            V      T  L   L  +    Y P      
Sbjct: 235 NNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWL--ALPGDARNHYIPRMEFIP 292

Query: 313 SSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTK 365
               +F    +  +   ++++ +   +    I  D++A++     +  W        +  
Sbjct: 293 GCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKYFTWES 352

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS---GRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DG + + + + +             G  + F    D  T   LY   
Sbjct: 353 ERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKG-FVYFIASPDNFTQRYLYRAR 411

Query: 423 LNGRNETLINTPAYAS 438
           L G  E    +P   S
Sbjct: 412 LFGNGEVKRLSPVDQS 427



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 54/348 (15%), Positives = 113/348 (32%), Gaps = 46/348 (13%)

Query: 80  NLISQDSFKQKITNPD-SIPRFQDWNSLGAQVLVTGRV---IKEGKDR---------LRV 126
             + + +      +PD S   +   N++  + LV G++    ++G +             
Sbjct: 142 KSLPEATLMFAKFSPDASRVAYVSRNNIYVESLVDGKINQLTQDGNNEIVNGTFDWVYEE 201

Query: 127 EFRLWDVK----DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           EF   D      D + I   +  +    W  I + + D IY  I            F   
Sbjct: 202 EFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNV-DSIYPKIQR----------FPYP 250

Query: 183 SVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPR--FSPNQQKVAYATY-DDEDILR 238
              +      +  +  DG N  +L  P   +  + PR  F P   ++        ++  +
Sbjct: 251 KAGTANSAVKVGYVSADGGNTTWLALPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNK 310

Query: 239 VYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           V++     +       +  +  L      R+    K      ++D    +Y V       
Sbjct: 311 VWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEI 370

Query: 295 ERLTNTLFI---NISASYSPDSSQIVFESDREGKEQLYVMQS---NGSDQKRISQDKEAS 348
           + +T   F     + A    D   + F +  +   Q Y+ ++      + KR+S   ++ 
Sbjct: 371 KPITQGAFDYIQEVGADM--DKGFVYFIASPDNFTQRYLYRARLFGNGEVKRLSPVDQSG 428

Query: 349 YFDPVWSPQGDLIAFT-KFSGEKFAIGVMK-KDGSQERLLVEDSNLQA 394
               + SP G     T   S     I ++        RL+ +++  + 
Sbjct: 429 QHRYIMSPSGKWAVHTFSNSETPPVIDMVSFPAHKSIRLITDNAKAKE 476


>gi|298374081|ref|ZP_06984039.1| dipeptidyl aminopeptidase IV [Bacteroides sp. 3_1_19]
 gi|298268449|gb|EFI10104.1| dipeptidyl aminopeptidase IV [Bacteroides sp. 3_1_19]
          Length = 733

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 100/322 (31%), Gaps = 82/322 (25%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDEDIL 237
           N++ ++  DG N      ++D I+                 +SP    +A+   D   + 
Sbjct: 160 NNVHILSPDGRNTIVTRETQDGIVCGQAVHQREFGITKGMFWSPKGSALAFYRMDKRMVT 219

Query: 238 RVYLMDTRI--------------------DRAPKRIGNFRSMILA---P--------RFS 266
              L++                            ++   +++ L    P         +S
Sbjct: 220 AYPLVNIDTRCATPVPHKYPMAGMKSHEVTVGVYQVATGQTVWLETGLPKEKYLTNIAWS 279

Query: 267 SNGKRALISVQKDEAMDIYSVD---LQSNATERL-TNTLFINISAS----YSP-DSSQIV 317
            + K   I+    E  +++ V    L       L T T    +       + P D  + +
Sbjct: 280 PDEKSIYIAELNREQNEMHLVRYSALTGKKEADLFTETDRCYVEPQHPVLFLPNDPDKFI 339

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---------KFSG 368
           ++S+ +G   LY+  + G + ++++  +        +S  G+ + F             G
Sbjct: 340 WQSEADGYNHLYLYDTTGKELRKLTGGEWVVTKVLGFSKDGNKVIFEGTAPHPVSPNMQG 399

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTW---------SPSGRS-LIFSRKKDGDTGSKL 418
                 + + D      L     +   +W         SPSG   + +           L
Sbjct: 400 TGMQRYIWETD------LRTGDIMNCLSWKVGVHRWLLSPSGEYAIDYVSSPSTPRDIDL 453

Query: 419 YSIDLNGRNETLINTPAYASDP 440
             I    ++  +I+T   A DP
Sbjct: 454 VRI----KDAKVISTLLSAPDP 471


>gi|228993093|ref|ZP_04153016.1| TolB domain protein [Bacillus pseudomycoides DSM 12442]
 gi|228766741|gb|EEM15381.1| TolB domain protein [Bacillus pseudomycoides DSM 12442]
          Length = 394

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 49/318 (15%), Positives = 111/318 (34%), Gaps = 78/318 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG N + +T    + + +P++S + + +AYA  ++++ L +Y +      
Sbjct: 17  RNHNLWI-KIDG-NEKQITKG--EYITKPKWSHDGKWIAYAKGEEQNQLELYRVADGKKV 72

Query: 249 APKRIGNFRSMILAPR-----------------------------------FSSNGKRAL 273
            P +     +   +P                                    +  +GK+ L
Sbjct: 73  VPSQ-TEATNYQWSPAENIIAFEFTSTLNTFDAEKKNATFENVSSGVGDYAWYPDGKKFL 131

Query: 274 ISVQ------KDEAMDIYSVDLQSN----ATERLTNTLF--------INISASYSPDSSQ 315
           +S +            +Y V   +       + L             I     +SP+   
Sbjct: 132 VSSEAQLLPTGWTGAQLYEVQKDAGMNPNKMKHLYTLPSMQEDFLAYIASDFKWSPNQKW 191

Query: 316 IVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-- 368
           I F      S       L +++++GS  +++ Q    S +   WSP  +++A+ + SG  
Sbjct: 192 IAFLAVPTASWSADSNTLCLLKADGSYFEKVDQMLLNSQW-IQWSPSKNILAYIEGSGRF 250

Query: 369 --EKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLI--------FSRKKDGDTGSK 417
             E   + + +     QE+   +       TW      +         +S +++  +   
Sbjct: 251 ALENKHLKIKELPALQQEKFTPKGYVDWDFTW-QDNELITLSRAKEMEWSNEEEKRSLPS 309

Query: 418 LYSIDLNGRNETLINTPA 435
           LY +++    +  I TP+
Sbjct: 310 LYQVNIQSNRQRQITTPS 327



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 40/84 (47%), Gaps = 10/84 (11%)

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +AF +       + + K DG  E+ + +   +  P WS  G+ + +++ ++     +LY 
Sbjct: 13  VAFIR----NHNLWI-KIDG-NEKQITKGEYITKPKWSHDGKWIAYAKGEE-QNQLELYR 65

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
           +  +G+   ++ +   A++ QW  
Sbjct: 66  V-ADGKK--VVPSQTEATNYQWSP 86


>gi|229153943|ref|ZP_04282072.1| Acylamino-acid-releasing enzyme [Bacillus cereus ATCC 4342]
 gi|228629464|gb|EEK86162.1| Acylamino-acid-releasing enzyme [Bacillus cereus ATCC 4342]
          Length = 652

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 113/339 (33%), Gaps = 64/339 (18%)

Query: 143 KFFSSPASWRKIAHTISDDIYQS-------ITGEKGDFNSRILFVSES-----VVSGIIK 190
            F    A+W+   +     IY+        +T    D    +   +          G  K
Sbjct: 33  AFVKRTANWKDNTYRNHVWIYEKGKGKSYPLTNGDIDSTCPLWSPNSRDIAYLSPGGNGK 92

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-----EDILRVY----- 240
           N + V   DG     +T   + I    ++    +   Y T        +    +Y     
Sbjct: 93  NQIFVKSLDGYGGVQITDEEEGISTF-KWDHTGKGFYYITQSKECEEIKKRKELYGDFQH 151

Query: 241 ---------------LMDTRIDRAPKRIGNFRSMILAPRF-------SSNGKRALI---- 274
                              + D+  + I +   +     F       S++GK+ +     
Sbjct: 152 VGKEHQNNCLCYIEIEKVIQNDKEEREINDVYQLTDGKDFYIHDFDISNDGKKVVCMATP 211

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKE------- 326
           S+      D+Y +D+++   +++     +  S  +SP+ S+I +  S RE +        
Sbjct: 212 SLNDYMNGDLYILDVEAEELQKMNVDRLLGGSVCFSPEGSKICYSASIREKEYYRNHIQE 271

Query: 327 -QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             L +   N  +  +   + +++     W+ +G  I         + IGV+  +G     
Sbjct: 272 STLEIYDMNTGEVLQPLTNFDSTVMPLQWTAKG--ILIRWQDKTNYLIGVL-AEGGTVET 328

Query: 386 LVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           L E  D  +   + +  G  + +++    +T  ++Y  D
Sbjct: 329 LSEKVDGFIMDASITRDGNHITYNKAITNET-FEIYLDD 366



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++ +        ++ + +     P+WSP   
Sbjct: 22  STNISDDGKNVAFVKRTANWKDNTYRNHVWIYEKGKGKSYPLT-NGDIDSTCPLWSPNSR 80

Query: 360 LIAFTKFSG-EKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G  K  I V   DG    ++  E+  +    W  +G+   +  + 
Sbjct: 81  DIAYLSPGGNGKNQIFVKSLDGYGGVQITDEEEGISTFKWDHTGKGFYYITQS 133



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 81/281 (28%), Gaps = 56/281 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     + N       P +S N +   
Sbjct: 24  NISDDGKNVAFVKRTANWKDNTYRNHVWIYEKGKGKSYPLTNGDIDSTCPLWSPNSRDIA 83

Query: 274 I-SVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDRE-------- 323
             S   +    I+   L      ++T+    I+    +        + +  +        
Sbjct: 84  YLSPGGNGKNQIFVKSLDGYGGVQITDEEEGISTF-KWDHTGKGFYYITQSKECEEIKKR 142

Query: 324 ----------GKEQ---------LYVMQSNGSDQK------RISQDKEASYFDPVWSPQG 358
                     GKE          +  +  N  +++      +++  K+    D   S  G
Sbjct: 143 KELYGDFQHVGKEHQNNCLCYIEIEKVIQNDKEEREINDVYQLTDGKDFYIHDFDISNDG 202

Query: 359 DLIA-FTKFSGEKF---AIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS------ 407
             +      S   +    + ++  +  + + + V+     +  +SP G  + +S      
Sbjct: 203 KKVVCMATPSLNDYMNGDLYILDVEAEELQKMNVDRLLGGSVCFSPEGSKICYSASIREK 262

Query: 408 ---RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
              R    ++  ++Y ++  G     +        P QW  
Sbjct: 263 EYYRNHIQESTLEIYDMN-TGEVLQPLTNFDSTVMPLQWTA 302



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 8/117 (6%)

Query: 260 ILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           + +   S +GK      +            ++  +     +  LTN    +    +SP+S
Sbjct: 20  VSSTNISDDGKNVAFVKRTANWKDNTYRNHVWIYEKGKGKSYPLTNGDIDSTCPLWSPNS 79

Query: 314 SQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             I + S    GK Q++V   +G    +I+ ++E       W   G    +   S E
Sbjct: 80  RDIAYLSPGGNGKNQIFVKSLDGYGGVQITDEEEGISTFK-WDHTGKGFYYITQSKE 135


>gi|329923105|ref|ZP_08278621.1| putative lipoprotein [Paenibacillus sp. HGF5]
 gi|328941878|gb|EGG38163.1| putative lipoprotein [Paenibacillus sp. HGF5]
          Length = 402

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 97/309 (31%), Gaps = 29/309 (9%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC---VMDRDGANIRYLTP---S 209
           H I+    ++   E     +    V E+  +   K +     V    G            
Sbjct: 79  HRIASSNIETWISEDKVRVTTTKMVKEATATEEPKYAYATEEVNVSTGERRELTNHEASH 138

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            DQ L +   SP+ +      + D+     ++ D    ++    G+   M +     ++ 
Sbjct: 139 PDQHLVKEEVSPDGKYSFIQKWRDKYTADNFMKDLSTGKSIPVKGD-NYMEIGGWLDAD- 196

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              L +       +I  +      T        + +   +     +I +    +  + L 
Sbjct: 197 TYVLAAGSMSGKGEIRLISTDGTYTTTAIEDEDVEVYNQFGASKGRIYYI---DVNQVLK 253

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----KFAIGVMKKDGS-QER 384
           V++   S    + +    + +    SP G+ IA +  +         + +    GS Q  
Sbjct: 254 VVEPGQSKPVHLIE----NVWSFTISPDGEYIAVSTATNTEGNSGSNLLIYDAAGSLQGS 309

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSIDLNGRNETLINTPAYASDPQ-- 441
           L+ + + +  P+WSP    L F    + ++G   +Y  D      + +     A  P   
Sbjct: 310 LIGKGNLISYPSWSPDSARLAFDVYSENESGMNGVYVFDTASGKVSWMAPYYSAVHPAAH 369

Query: 442 ------WVG 444
                 W  
Sbjct: 370 PVYPLTWSP 378



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 55/124 (44%), Gaps = 10/124 (8%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY--ATYDD 233
            I   + +   G   ++L + D  G+ ++     +  ++  P +SP+  ++A+   + ++
Sbjct: 280 YIAVSTATNTEGNSGSNLLIYDAAGS-LQGSLIGKGNLISYPSWSPDSARLAFDVYSENE 338

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAP------RFSSNGKRALISV-QKDEAMDIYS 286
             +  VY+ DT   +       + ++  A        +S +GKR  I++  KD  +  + 
Sbjct: 339 SGMNGVYVFDTASGKVSWMAPYYSAVHPAAHPVYPLTWSPSGKRLGITIDDKDALIATHV 398

Query: 287 VDLQ 290
           +D Q
Sbjct: 399 IDFQ 402



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 41/115 (35%), Gaps = 16/115 (13%)

Query: 305 ISASYSPDSSQIVFES--DREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            S + SPD   I   +  + EG     L +  + GS Q  +   K      P WSP    
Sbjct: 270 WSFTISPDGEYIAVSTATNTEGNSGSNLLIYDAAGSLQGSLI-GKGNLISYPSWSPDSAR 328

Query: 361 IAF---TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSL 404
           +AF   ++       + V      +   +    +   P        TWSPSG+ L
Sbjct: 329 LAFDVYSENESGMNGVYVFDTASGKVSWMAPYYSAVHPAAHPVYPLTWSPSGKRL 383


>gi|310792479|gb|EFQ28006.1| hypothetical protein GLRG_03150 [Glomerella graminicola M1.001]
          Length = 897

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 91/237 (38%), Gaps = 20/237 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N+ +        +     + + + +A+       +L V+   +      K+ G+F SM 
Sbjct: 289 FNMIHTLNISQNEIDFVTINKSGEWLAFGASKLGQLL-VWEWQSE-SYILKQQGHFDSMN 346

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +S +G+R + ++  D  + ++  D +S       T       +  +S   + ++F 
Sbjct: 347 NL-VYSPDGQRIV-TIADDGKIKVW--DTESGFCIVTFTEHTSGVTACEFSKKGN-VLFT 401

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S  +G  + + +     + +  +     S+      P G+++A        F I +    
Sbjct: 402 SSLDGSVRAWDL-IRYRNFRTFTAPTRLSWSCMAVDPSGEVVAAGSLD--SFDIHIWSVQ 458

Query: 380 GSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             Q   +L   +  + A  ++P+G SLI       D  ++++SI     N T  + P
Sbjct: 459 TGQLLDQLTGHEGPVSALAFTPNGDSLISGSW---DRTARIWSI----FNRTQTSEP 508


>gi|294776245|ref|ZP_06741730.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           vulgatus PC510]
 gi|294449928|gb|EFG18443.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           vulgatus PC510]
          Length = 743

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 62/212 (29%), Gaps = 65/212 (30%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDR-----EGKEQLYVMQSNG 335
                ++ Q+     + N         +S D+S++ ++ + R     + +   +V+    
Sbjct: 82  PANMLLNPQTGKPISVRNF-------VFSEDNSKVLIYTNTRRVWRYDTRGDYWVLNLKD 134

Query: 336 SDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
              +++     EA+     +SP    +A+   +     I V      +   L +D N + 
Sbjct: 135 GKLQQLGKSLPEATLMFAKFSPDASRVAYVSRN----NIYVESLVDGKINQLTQDGNNEI 190

Query: 394 -----------------APTWSPSGRSLIFS-RKKDGDTGSKLYS--------------- 420
                               WSP G+ + +      G     + +               
Sbjct: 191 VNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYP 250

Query: 421 -------------IDLNGRNETLINTPAYASD 439
                        +  +G N T +  P  A +
Sbjct: 251 KAGTANSAVKVGYVSADGGNTTWLALPGDARN 282



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 92/316 (29%), Gaps = 61/316 (19%)

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---EDI 236
           +  V     +    V++ +DG   +      +  L   +FSP+  +VAY + ++   E +
Sbjct: 115 TRRVWRYDTRGDYWVLNLKDGKLQQLGKSLPEATLMFAKFSPDASRVAYVSRNNIYVESL 174

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMIL--------APRFSSNGKRALIS---VQKDEAMDIY 285
           +   +     D   + +      +           R+S +G+         Q     DI 
Sbjct: 175 VDGKINQLTQDGNNEIVNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDII 234

Query: 286 S----------------------------VDLQSNATERLTNTLFINISASYSPD----- 312
           +                            V      T  L   L  +    Y P      
Sbjct: 235 NNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWL--ALPGDARNHYIPRMEFIP 292

Query: 313 SSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTK 365
               +F    +  +   ++++ +   +    I  D++A++     +  W        +  
Sbjct: 293 GCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKYFTWES 352

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS---GRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DG + + + + +             G  + F    D  T   LY   
Sbjct: 353 ERDGWRHLYRISRDGKEIKPITQGAFDYIQEVGADMDKG-FVYFIASPDNFTQRYLYRAR 411

Query: 423 LNGRNETLINTPAYAS 438
           L G  E    +P   S
Sbjct: 412 LFGNGEVKRLSPVDQS 427



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 106/322 (32%), Gaps = 59/322 (18%)

Query: 174 NSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQ 223
            SR+ +VS +   V  ++   +  + +DG N   +       ++E         R+SP+ 
Sbjct: 158 ASRVAYVSRNNIYVESLVDGKINQLTQDGNNE--IVNGTFDWVYEEEFNCRDGFRWSPDG 215

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRSMILAPRFSSNG---KRAL 273
           Q +AY   D +      +++      PK       + G   S +     S++G       
Sbjct: 216 QYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWLA 275

Query: 274 --------ISVQKDEAMDIYSVDLQSNATERLTNTLFI---------------------- 303
                      + +       + +Q     + TN ++I                      
Sbjct: 276 LPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLET 335

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N +  +   +    +ES+R+G   LY +  +G + K I+Q       +         + F
Sbjct: 336 NDNVRWLKGNKYFTWESERDGWRHLYRISRDGKEIKPITQGAFDYIQEVGADMDKGFVYF 395

Query: 364 TKFSGEKFAIGVMKK----DGSQERL-LVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSK 417
                      + +     +G  +RL  V+ S       SPSG+  +      +      
Sbjct: 396 IASPDNFTQRYLYRARLFGNGEVKRLSPVDQSGQHRYIMSPSGKWAVHTFSNSETPPVID 455

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           + S   + ++  LI   A A +
Sbjct: 456 MVSFPAH-KSIRLITDNAKAKE 476



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 53/348 (15%), Positives = 113/348 (32%), Gaps = 46/348 (13%)

Query: 80  NLISQDSFKQKITNPD-SIPRFQDWNSLGAQVLVTGRV---IKEGKDR---------LRV 126
             + + +      +PD S   +   N++  + LV G++    ++G +             
Sbjct: 142 KSLPEATLMFAKFSPDASRVAYVSRNNIYVESLVDGKINQLTQDGNNEIVNGTFDWVYEE 201

Query: 127 EFRLWDVK----DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           EF   D      D + I   +  +    W  I + + D IY  I            F   
Sbjct: 202 EFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNV-DSIYPKIQR----------FPYP 250

Query: 183 SVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPR--FSPNQQKVAYATY-DDEDILR 238
              +      +  +  DG N  +L  P   +  + PR  F P   ++        ++  +
Sbjct: 251 KAGTANSAVKVGYVSADGGNTTWLALPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNK 310

Query: 239 VYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           V++     +       +  +  L      R+    K      ++D    +Y +       
Sbjct: 311 VWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKYFTWESERDGWRHLYRISRDGKEI 370

Query: 295 ERLTNTLFI---NISASYSPDSSQIVFESDREGKEQLYVMQS---NGSDQKRISQDKEAS 348
           + +T   F     + A    D   + F +  +   Q Y+ ++      + KR+S   ++ 
Sbjct: 371 KPITQGAFDYIQEVGADM--DKGFVYFIASPDNFTQRYLYRARLFGNGEVKRLSPVDQSG 428

Query: 349 YFDPVWSPQGDLIAFT-KFSGEKFAIGVMK-KDGSQERLLVEDSNLQA 394
               + SP G     T   S     I ++        RL+ +++  + 
Sbjct: 429 QHRYIMSPSGKWAVHTFSNSETPPVIDMVSFPAHKSIRLITDNAKAKE 476


>gi|74177987|dbj|BAE29788.1| unnamed protein product [Mus musculus]
          Length = 314

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/217 (15%), Positives = 84/217 (38%), Gaps = 23/217 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D
Sbjct: 28  APDVSCLILATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRD 85

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + + I+ ++      + L+  L      S SPD S +       G++ +++         
Sbjct: 86  KTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLI 142

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---------- 389
           R  +  ++S     +SP   L+    +      I      G + R L             
Sbjct: 143 RKLEGHQSSVVSCDFSPDSALLVTASYDTS--VIMWDPYTGERLRSLHHTQLEPTMDDSD 200

Query: 390 ---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              S+L++  +SP G   ++      D   ++++++L
Sbjct: 201 VHMSSLRSVCFSPEG---LYLATVADDRLLRIWALEL 234


>gi|218437597|ref|YP_002375926.1| hypothetical protein PCC7424_0597 [Cyanothece sp. PCC 7424]
 gi|218170325|gb|ACK69058.1| hypothetical protein PCC7424_0597 [Cyanothece sp. PCC 7424]
          Length = 815

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 82/224 (36%), Gaps = 23/224 (10%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +   DG N        +     P+ S N  ++ +  +D  D  +++  D        +I 
Sbjct: 463 IFFYDG-NRTIQITDNNLNNINPQISDN--RLVWEAFD-GDSSQIFFYD---GNRTIQIT 515

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +     + P+ S  G R +      E  +I+  D   N T ++TN    + +   S   +
Sbjct: 516 DNNLNNINPQIS--GNRLVWEGFDGEDTEIFFYD--GNRTIQITNNNLNDTNPQIS--GN 569

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++V+E+      +++    +G+   +I+ +        +       + +  F GE   I 
Sbjct: 570 RLVWEAFDGEDTEIFFY--DGNRTIQITDNNFEDTNPQI---DDFRLIWEGFDGENSQIF 624

Query: 375 VMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSK 417
               DG++   L ED+     P  S  G   ++      D   +
Sbjct: 625 FY--DGNRTIQLTEDNLTNINPQIS--GNFGVWESNNGQDFEIQ 664


>gi|332187302|ref|ZP_08389041.1| X-Pro dipeptidyl-peptidase family protein [Sphingomonas sp. S17]
 gi|332012723|gb|EGI54789.1| X-Pro dipeptidyl-peptidase family protein [Sphingomonas sp. S17]
          Length = 668

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 4/106 (3%)

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLV-- 387
           M ++    +R       +      SP G  I+F         + V       Q + L   
Sbjct: 32  MAADVPLIERAKLFGNPTKVGGQLSPDGKWISFIAPRDGVLNVWVAPIATPDQAKPLTAE 91

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
           +   ++   WSP  +S++F   K GD    LY +++  G  + L  
Sbjct: 92  KTRPIRQSFWSPDSKSILFVNDKGGDENFLLYGVNVATGEQKALTP 137



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 48/135 (35%), Gaps = 13/135 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISA----SYSPDSSQIVFE 319
            S +GK       +D  ++++   + + +  + LT              +SPDS  I+F 
Sbjct: 55  LSPDGKWISFIAPRDGVLNVWVAPIATPDQAKPLTAEK---TRPIRQSFWSPDSKSILFV 111

Query: 320 SDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIG 374
           +D+ G E   LY +     +QK ++  ++        S       L+           + 
Sbjct: 112 NDKGGDENFLLYGVNVATGEQKALTPFEKTRVQIVGTSETIKDRILVGVNNRDPRWHDVY 171

Query: 375 VMKKDGSQERLLVED 389
            +         ++++
Sbjct: 172 ELNLTTGALTKVMQN 186



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 3/86 (3%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAF 363
           +    SPD   I F + R+G   ++V      DQ K ++ +K        WSP    I F
Sbjct: 51  VGGQLSPDGKWISFIAPRDGVLNVWVAPIATPDQAKPLTAEKTRPIRQSFWSPDSKSILF 110

Query: 364 TKFSGE--KFAIGVMKKDGSQERLLV 387
               G    F +  +     +++ L 
Sbjct: 111 VNDKGGDENFLLYGVNVATGEQKALT 136



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 79/229 (34%), Gaps = 23/229 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQK 278
           SP+ + +++     + +L V++         K +   ++  +    +S + K  L    K
Sbjct: 56  SPDGKWISFIA-PRDGVLNVWVAPIATPDQAKPLTAEKTRPIRQSFWSPDSKSILFVNDK 114

Query: 279 DEAMD--IYSVDLQSNATERLTNTLF-----INISASYSPDSSQIVFESDREGKEQ-LYV 330
               +  +Y V++ +   + LT         +  S +       +V  ++R+ +   +Y 
Sbjct: 115 GGDENFLLYGVNVATGEQKALTPFEKTRVQIVGTSETI--KDRILVGVNNRDPRWHDVYE 172

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +        ++ Q+   + F    +       +A             +     +   +V+
Sbjct: 173 LNLTTGALTKVMQNDGYAGF---LADDQLKLRMAAKARPDGGSDYYRVNGTNVEATPVVQ 229

Query: 389 DSNLQAPTWSP-----SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                + T SP      G++L +   + G   + L + D+      +I 
Sbjct: 230 FGLDDSLTTSPLGFTVDGKTLYWMDSR-GRNTAALMAQDMGSGKMAVIG 277


>gi|327285512|ref|XP_003227477.1| PREDICTED: WD repeat-containing protein 61-like [Anolis
           carolinensis]
          Length = 305

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 68/213 (31%), Gaps = 10/213 (4%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D D         +     +   FSP+ Q VA  ++    I +V +      +    
Sbjct: 88  IRIWDLDSGKQIRSIDAGPVDAWSLAFSPDSQYVATGSH----IGKVNIFGVETGKKEYS 143

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      IL+  +S +GK    S   D  ++I+ +         L        S ++SPD
Sbjct: 144 LDTRGKFILSIAYSPDGKYLA-SGAIDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPD 201

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S  +V  SD      + +     ++         +   +  + P       +  S +   
Sbjct: 202 SQLLVTASD---DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDNSHFV-SSSSDKTVK 257

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +  +               +    ++ +G  ++
Sbjct: 258 VWDVPSRTCVHTFFDHQDQVWGVQYNGNGSKIV 290



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/268 (16%), Positives = 85/268 (31%), Gaps = 43/268 (16%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           TG V       L    R+WD+   KQI  +   + P                        
Sbjct: 75  TGTV--AASSSLDAHIRIWDLDSGKQI--RSIDAGPVD-----------------AWSLA 113

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F+    +V+    +G     + +   +     Y   +R + +    +SP+ + +A    D
Sbjct: 114 FSPDSQYVA----TGSHIGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAID 169

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DL 289
                 + + D    +    +      I +  FS +  + L++   D  + IY V   +L
Sbjct: 170 G----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKIYDVQHANL 224

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                  L+      ++ ++ PD+S  V  S     + + V             D +   
Sbjct: 225 AGT----LSGHASWVLNVAFCPDNSHFVSSSS---DKTVKVWDVPSRTCVHTFFDHQDQV 277

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +   ++  G  I      G+   I V  
Sbjct: 278 WGVQYNGNGSKIVSV---GDDQEIHVYD 302


>gi|254881736|ref|ZP_05254446.1| dipeptidyl aminopeptidase [Bacteroides sp. 4_3_47FAA]
 gi|254834529|gb|EET14838.1| dipeptidyl aminopeptidase [Bacteroides sp. 4_3_47FAA]
          Length = 759

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 62/212 (29%), Gaps = 65/212 (30%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDR-----EGKEQLYVMQSNG 335
                ++ Q+     + N         +S D+S++ ++ + R     + +   +V+    
Sbjct: 98  PANMLLNPQTGKPISVRNF-------VFSEDNSKVLIYTNTRRVWRYDTRGDYWVLNLKD 150

Query: 336 SDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
              +++     EA+     +SP    +A+   +     I V      +   L +D N + 
Sbjct: 151 GKLQQLGKSLPEATLMFAKFSPDASRVAYVSRN----NIYVESLVDGKINQLTQDGNNEI 206

Query: 394 -----------------APTWSPSGRSLIFS-RKKDGDTGSKLYS--------------- 420
                               WSP G+ + +      G     + +               
Sbjct: 207 VNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYP 266

Query: 421 -------------IDLNGRNETLINTPAYASD 439
                        +  +G N T +  P  A +
Sbjct: 267 KAGTANSAVKVGYVSADGGNTTWLALPGDARN 298



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 107/322 (33%), Gaps = 59/322 (18%)

Query: 174 NSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQ 223
            SR+ +VS +   V  ++   +  + +DG N   +       ++E         R+SP+ 
Sbjct: 174 ASRVAYVSRNNIYVESLVDGKINQLTQDGNNE--IVNGTFDWVYEEEFNCRDGFRWSPDG 231

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRSMILAPRFSSNG---KRAL 273
           Q +AY   D +      +++      PK       + G   S +     S++G       
Sbjct: 232 QYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWLA 291

Query: 274 --------ISVQKDEAMDIYSVDLQSNATERLTNTLFI---------------------- 303
                      + +       + +Q     + TN ++I                      
Sbjct: 292 LPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLET 351

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N +  +   +    +ES+R+G   LY +  +G + K I+Q       +         + F
Sbjct: 352 NDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKGFVYF 411

Query: 364 TKFSGEKFAIGVMKK----DGSQERL-LVEDSNLQAPTWSPSGRSLIFS-RKKDGDTGSK 417
                      + +     +G  +RL  V+ S       SPSG+  + +    +      
Sbjct: 412 IASPDNFTQRYLYRARLFGNGEVKRLSPVDQSGQHRYIMSPSGKWAVHTFSNSETPPVID 471

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           + S   + ++  LI   A A +
Sbjct: 472 MVSFPAH-KSIRLITDNAKAKE 492



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 92/316 (29%), Gaps = 61/316 (19%)

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---EDI 236
           +  V     +    V++ +DG   +      +  L   +FSP+  +VAY + ++   E +
Sbjct: 131 TRRVWRYDTRGDYWVLNLKDGKLQQLGKSLPEATLMFAKFSPDASRVAYVSRNNIYVESL 190

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMIL--------APRFSSNGKRALIS---VQKDEAMDIY 285
           +   +     D   + +      +           R+S +G+         Q     DI 
Sbjct: 191 VDGKINQLTQDGNNEIVNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDII 250

Query: 286 S----------------------------VDLQSNATERLTNTLFINISASYSPD----- 312
           +                            V      T  L   L  +    Y P      
Sbjct: 251 NNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWL--ALPGDARNHYIPRMEFIP 308

Query: 313 SSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTK 365
               +F    +  +   ++++ +   +    I  D++A++     +  W        +  
Sbjct: 309 GCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKYFTWES 368

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS---GRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DG + + + + +             G  + F    D  T   LY   
Sbjct: 369 ERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKG-FVYFIASPDNFTQRYLYRAR 427

Query: 423 LNGRNETLINTPAYAS 438
           L G  E    +P   S
Sbjct: 428 LFGNGEVKRLSPVDQS 443



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 54/348 (15%), Positives = 113/348 (32%), Gaps = 46/348 (13%)

Query: 80  NLISQDSFKQKITNPD-SIPRFQDWNSLGAQVLVTGRV---IKEGKDR---------LRV 126
             + + +      +PD S   +   N++  + LV G++    ++G +             
Sbjct: 158 KSLPEATLMFAKFSPDASRVAYVSRNNIYVESLVDGKINQLTQDGNNEIVNGTFDWVYEE 217

Query: 127 EFRLWDVK----DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           EF   D      D + I   +  +    W  I + + D IY  I            F   
Sbjct: 218 EFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNV-DSIYPKIQR----------FPYP 266

Query: 183 SVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPR--FSPNQQKVAYATY-DDEDILR 238
              +      +  +  DG N  +L  P   +  + PR  F P   ++        ++  +
Sbjct: 267 KAGTANSAVKVGYVSADGGNTTWLALPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNK 326

Query: 239 VYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           V++     +       +  +  L      R+    K      ++D    +Y V       
Sbjct: 327 VWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEI 386

Query: 295 ERLTNTLFI---NISASYSPDSSQIVFESDREGKEQLYVMQS---NGSDQKRISQDKEAS 348
           + +T   F     + A    D   + F +  +   Q Y+ ++      + KR+S   ++ 
Sbjct: 387 KPITQGAFDYIQEVGADM--DKGFVYFIASPDNFTQRYLYRARLFGNGEVKRLSPVDQSG 444

Query: 349 YFDPVWSPQGDLIAFT-KFSGEKFAIGVMK-KDGSQERLLVEDSNLQA 394
               + SP G     T   S     I ++        RL+ +++  + 
Sbjct: 445 QHRYIMSPSGKWAVHTFSNSETPPVIDMVSFPAHKSIRLITDNAKAKE 492


>gi|148689181|gb|EDL21128.1| WD repeat domain 51A, isoform CRA_a [Mus musculus]
          Length = 375

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 83/228 (36%), Gaps = 18/228 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG + ++L +      +  Y        +    FSP+   +A  + D    +R+++ + +
Sbjct: 54  SGSMDSTLMIWHMKSQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRD--KTVRIWVPNVK 111

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +    R     + + +  F S+G+  + +   D+ + ++S   Q      LT  +    
Sbjct: 112 GESTVFR--AHTATVRSVHFCSDGQSLV-TASDDKTVKVWSTHRQ-RFLFSLTQHINWVR 167

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A +SPD   IV  SD    + + +      +      +         + P G  IA   
Sbjct: 168 CAKFSPDGRLIVSASD---DKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAG 224

Query: 366 FSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
                  +     D    RLL    +  + + A ++ PSG  LI +  
Sbjct: 225 MDNTV-KVW----DARTHRLLQHYQLHSAAVNALSFHPSGNYLITASS 267



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 69/225 (30%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +      +  +    +    F  + Q +  A+ D      V +  T 
Sbjct: 96  SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDK----TVKVWSTH 151

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             R    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 152 RQRFLFSLTQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKTSRECIHSYCEHGGFV 208

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + I           + V  +      +  Q   A+     + P G+ +   
Sbjct: 209 TYVDFHPSGTCIAAAGM---DNTVKVWDARTHRLLQHYQLHSAAVNALSFHPSGNYLITA 265

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 266 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 300


>gi|32472761|ref|NP_865755.1| dipeptidyl peptidase IV [Rhodopirellula baltica SH 1]
 gi|32443998|emb|CAD73440.1| dipeptidyl peptidase IV [Rhodopirellula baltica SH 1]
          Length = 708

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 56/279 (20%), Positives = 100/279 (35%), Gaps = 43/279 (15%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +V         ++   + D         T   +    +P  SP+   V         I  
Sbjct: 73  YVVREKAIDSGESVQAIYDMVTGERTVATSEVETTSRDPMLSPDGTSVLKKQRRGWGIRD 132

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +   +TR    P   G+     L+  +S +GKR L                  +   RL 
Sbjct: 133 LTSGETRPLLKPDEAGDIHYQDLS--WSPDGKRILFVESN-------------SNEVRLR 177

Query: 299 NTLFINISASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQKRISQ------DKEAS 348
           N L  +   SY P  S+  F   R G +    ++ V+ S+G D   ++       +    
Sbjct: 178 NVLVPDD-PSY-PGVSKTRFA--RVGTKIPELRVGVVDSSGEDVHSVTWLPIEFPEDGGY 233

Query: 349 YFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQA---------PTW 397
           + +  W+   + I   + S   +K    + + DG    +L E +   A           W
Sbjct: 234 FGEVSWAGNSEEILVERLSRFRDKREFLLARVDGVVSTILEETNEAWAVGSHGINSGVKW 293

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
              G++ +F  +KDG    + ++ID +G+NE L+ TP  
Sbjct: 294 IDGGKNFVFLSEKDG--WRQAFAIDRDGKNERLL-TPGD 329



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 47/337 (13%), Positives = 107/337 (31%), Gaps = 85/337 (25%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--- 217
            IY  +TGE+    S +   S   +      S+    R G  IR LT    + L +P   
Sbjct: 88  AIYDMVTGERTVATSEVETTSRDPMLSPDGTSVLKKQRRGWGIRDLTSGETRPLLKPDEA 147

Query: 218 --------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-------KRIGN------- 255
                    +SP+ +++ +   +  ++    ++       P        R+G        
Sbjct: 148 GDIHYQDLSWSPDGKRILFVESNSNEVRLRNVLVPDDPSYPGVSKTRFARVGTKIPELRV 207

Query: 256 ----------------------FRSMILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQS 291
                                          ++ N +  L+    +  +  +     +  
Sbjct: 208 GVVDSSGEDVHSVTWLPIEFPEDGGYFGEVSWAGNSEEILVERLSRFRDKREFLLARVDG 267

Query: 292 NATERL--TN------TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
             +  L  TN      +  IN    +       VF S+++G  Q + +  +G +++ ++ 
Sbjct: 268 VVSTILEETNEAWAVGSHGINSGVKWIDGGKNFVFLSEKDGWRQAFAIDRDGKNERLLTP 327

Query: 344 ---------------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLL 386
                          D++  ++    SP          +G +  +  +  DG+   ER+ 
Sbjct: 328 GDYDIIDRAESGDVVDEDGGWYYFYASPD---------NGTQRYLFRVPLDGTGTLERIT 378

Query: 387 VED-SNLQAPTWSPSGRSLIFS-RKKDGDTGSKLYSI 421
            +D +   +  +SP  +  + +    +      L +I
Sbjct: 379 GKDQAGWHSYQFSPDRKWAVHTYSTVNSPPVVDLVTI 415


>gi|332991614|gb|AEF01669.1| Dipeptidyl peptidase IV [Alteromonas sp. SN2]
          Length = 735

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 99/271 (36%), Gaps = 43/271 (15%)

Query: 218 RFSPNQQKVAYATYDDEDI-----LRVYLMDTRI--DRAPKRIGN-------FRSMILAP 263
            +SP++  +A+   D+  +       +Y  D +    + PK   N        +++    
Sbjct: 209 WWSPDESFIAFTKVDESPVDVISRSEIYADDIKTIEQKYPKAGTNNVLVELAIQNINNGA 268

Query: 264 R-----------------FSSNGKRALISVQKDE--AMDIYSVDLQSNATERL---TNTL 301
           R                 +  N +      Q  +   +++ + ++ +     L   T+  
Sbjct: 269 RRWVDLGEDKDIYLARGKWMPNSETFTYQWQTRDQQTLELRAYNVPTEKQSVLLSETSNT 328

Query: 302 FINISAS--YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           ++N+     +  DS Q ++ S+R+G + LY+ +++G   ++++Q             + +
Sbjct: 329 WVNLHNDLYFLSDSDQFIWASERDGFKHLYLYENSGKLVRQLTQGDWVVDNIEAVDAKNN 388

Query: 360 LIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            I F        +     +  DG     +  +    + ++S    S+   R    ++ ++
Sbjct: 389 RIYFAGRKDTPLESHAYSVSLDGGDISRITNEGAYHSVSFSKD-ASIFIDRLSTINSPAQ 447

Query: 418 LYSIDLNGRNETLINTP-AYASDPQWVGFMD 447
           +   D +G+  T +         P +  +MD
Sbjct: 448 VSLNDASGKRITWLEENKVEEGHPLY-PYMD 477



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 69/216 (31%), Gaps = 52/216 (24%)

Query: 202 NIRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG---- 254
           +I  +  S       PR    SP+ ++V +      D  R+ L +  ID    R+     
Sbjct: 22  DIERIFASPSLDGNAPRALKVSPDGERVTFLKGKQTDYERLDLWEYHIDSGETRLLFDSN 81

Query: 255 ---------------------NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                                   S I++ ++S++GK  L  +      D+Y   L    
Sbjct: 82  DLQSGEEVLSDEEKARRERMRLSGSGIVSYQWSADGKALLFPL----GGDVYYHKLGEKG 137

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS----- 348
            ++L +T         SP  + I F  D    + L+V       +  I+++   +     
Sbjct: 138 AKQLLDTDVFETDIKLSPKGNYISFIRD----QNLFVKHIESGKETAITKEGGGNIKFGM 193

Query: 349 -----------YFDPVWSPQGDLIAFTKFSGEKFAI 373
                           WSP    IAFTK       +
Sbjct: 194 AEFVAQEEMGRMTGYWWSPDESFIAFTKVDESPVDV 229



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 65/191 (34%), Gaps = 13/191 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILA 262
           L   +D  L   ++ PN +   Y     +     LR Y + T          +   + L 
Sbjct: 274 LGEDKDIYLARGKWMPNSETFTYQWQTRDQQTLELRAYNVPTEKQSVLLSETSNTWVNLH 333

Query: 263 PR--FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI--NISASYSPDSSQIVF 318
               F S+  + + + ++D    +Y  +       +LT   ++  NI A     +++I F
Sbjct: 334 NDLYFLSDSDQFIWASERDGFKHLYLYENSGKLVRQLTQGDWVVDNIEAV-DAKNNRIYF 392

Query: 319 ESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEKFAIGV 375
              ++       Y +  +G D  RI+   E +Y    +S      I           + +
Sbjct: 393 AGRKDTPLESHAYSVSLDGGDISRIT--NEGAYHSVSFSKDASIFIDRLSTINSPAQVSL 450

Query: 376 MKKDGSQERLL 386
               G +   L
Sbjct: 451 NDASGKRITWL 461


>gi|327438593|dbj|BAK14958.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Solibacillus
           silvestris StLB046]
          Length = 752

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 73/197 (37%), Gaps = 14/197 (7%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           Y ++DI    + +  ++   +  G+          S +G+    + +    ++++  ++ 
Sbjct: 141 YQNKDIDNTGVQEISVEDFMRNPGSLGYQ-----LSPDGEYIAYAAEWQSRLNVFIKNMD 195

Query: 291 S-NATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEA 347
             +   R+T+T   +I+  +  D++ + +  D  G     +Y    NG+ +K ++     
Sbjct: 196 DESEPVRVTSTTDRDIAGLFWKDNN-MYYLKDNGGDENYHIYSSSFNGAKEKDLTPYPNV 254

Query: 348 SYFDPVW---SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-S 403
                 +        LI   K     F +  +       +L+ ++      +W P     
Sbjct: 255 VVLPIDYLKDVEDEILIMMNKEDATVFDVYKLNVKTGATKLVAKNPGNIL-SWIPDSNGQ 313

Query: 404 LIFSRKKDGDTGSKLYS 420
           +  +   DG  G+ LY 
Sbjct: 314 IRMAVASDGVVGAVLYR 330



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 36/110 (32%), Gaps = 9/110 (8%)

Query: 332 QSNGSDQKRIS---QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV--MKKDGSQERLL 386
             + +  + IS     +         SP G+ IA+      +  + +  M  +    R+ 
Sbjct: 145 DIDNTGVQEISVEDFMRNPGSLGYQLSPDGEYIAYAAEWQSRLNVFIKNMDDESEPVRVT 204

Query: 387 -VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTP 434
              D ++    W        + +   GD    +YS   NG  E  L   P
Sbjct: 205 STTDRDIAGLFW-KDNNM-YYLKDNGGDENYHIYSSSFNGAKEKDLTPYP 252


>gi|284040044|ref|YP_003389974.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283819337|gb|ADB41175.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 668

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 16/114 (14%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQ-----ERLLVEDSN 391
              + +   P +S  G  +   + +  K        + + +   +       RL + DS 
Sbjct: 230 FQGDVNEGTPAFSKDGKTMILARGNNGKRKGGLDVDLYISRLGDNNTWSQPLRLPISDSL 289

Query: 392 LQ--APTWSPSGRSLIFSRKK-DGDTGSKLY--SIDLNGRNETLINTPAYASDP 440
               +P +S  G++L F+  +  G  G  LY  SID +GR    +N     + P
Sbjct: 290 AWDGSPAFSADGKTLYFASNRAGGAGGIDLYRTSIDASGRFSRPVNMGRDINTP 343



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 74/218 (33%), Gaps = 53/218 (24%)

Query: 259 MILAPRFSSNGKRALISVQKDE------AMDIYSVDLQSNATE------RLTNTLFINIS 306
               P FS +GK  +++   +        +D+Y   L  N T        ++++L  + S
Sbjct: 235 NEGTPAFSKDGKTMILARGNNGKRKGGLDVDLYISRLGDNNTWSQPLRLPISDSLAWDGS 294

Query: 307 ASYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            ++S D   + F S+R G      LY    + S +      +  +    + +P  ++  +
Sbjct: 295 PAFSADGKTLYFASNRAGGAGGIDLYRTSIDASGR----FSRPVNMGRDINTPGDEMFPY 350

Query: 364 T------------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS---- 407
                             K  I V  + G   R+      + +P        LI++    
Sbjct: 351 VGANAKLYFASDGHPGLGKLDIFVATRSGGVTRVENMGQPINSPA---DDFGLIYTDPTK 407

Query: 408 ----RKKDGDTG-SKLY------SIDLNGRNETLINTP 434
                 + G  G   +Y      S+D      T++ TP
Sbjct: 408 GFMASNRGGGKGDDDIYFFQEGPSVDST----TIVQTP 441


>gi|197122926|ref|YP_002134877.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Anaeromyxobacter sp. K]
 gi|196172775|gb|ACG73748.1| peptidase S9B dipeptidylpeptidase IV domain protein
           [Anaeromyxobacter sp. K]
          Length = 740

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 59/192 (30%), Gaps = 54/192 (28%)

Query: 258 SMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATE-------------------- 295
                 + S +G+ AL   S  +  A  +   DL + AT                     
Sbjct: 43  GRPTGVQLSPDGRTALFLRSGPRSRAQALLETDLATGATRTVVEADGAGAISPEEAARLE 102

Query: 296 --RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             R+T    I    + SPD +++V+        +L+++  +      +         DP 
Sbjct: 103 RQRIT-ARGI-THFALSPDGARVVY----GLGGRLWLLDRSAGRAAPL--PGSEGALDPR 154

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQAP 395
           +SP G  +A+ +       + V       ER L                        +  
Sbjct: 155 FSPDGRALAYVRRGD----LYVRAVPRGPERRLTRARGPQVTNGLAEFVAQEEMDRDEGF 210

Query: 396 TWSPSGRSLIFS 407
            WSP  R + ++
Sbjct: 211 WWSPDARRIAYA 222



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 53/184 (28%), Gaps = 45/184 (24%)

Query: 220 SPNQQKVAYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAP--------------- 263
           SP+ +   +         +  L  D         +    +  ++P               
Sbjct: 51  SPDGRTALFLRSGPRSRAQALLETDLATGATRTVVEADGAGAISPEEAARLERQRITARG 110

Query: 264 ----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                 S +G R +  +       ++ +D  +     L  +    +   +SPD   + + 
Sbjct: 111 ITHFALSPDGARVVYGL----GGRLWLLDRSAGRAAPLPGSEGA-LDPRFSPDGRALAYV 165

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQGDLIAF 363
                +  LYV       ++R+++ +     + +                WSP    IA+
Sbjct: 166 R----RGDLYVRAVPRGPERRLTRARGPQVTNGLAEFVAQEEMDRDEGFWWSPDARRIAY 221

Query: 364 TKFS 367
            +  
Sbjct: 222 AEVD 225



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 77/259 (29%), Gaps = 49/259 (18%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD------EDILRVYLMDTR 245
            L ++DR       L  S      +PRFSP+ + +AY    D             L   R
Sbjct: 130 RLWLLDRSAGRAAPLPGSEG--ALDPRFSPDGRALAYVRRGDLYVRAVPRGPERRLTRAR 187

Query: 246 IDRAPKRIGNFRSMILAPR-----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +    +  F +     R     +S + +R   +           VD +S    R+   
Sbjct: 188 GPQVTNGLAEFVAQEEMDRDEGFWWSPDARRIAYA----------EVD-ESAVERRMLCD 236

Query: 301 LFINISASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQK-----RISQDKEASYFD 351
                            +   R G      +L V+ + G         R    +      
Sbjct: 237 PARPARP-----CEARAYP--RAGTPNAAVRLKVVPAAGGPAVPAVEIRWDASRYPYLAA 289

Query: 352 PVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRS 403
             W+  G L+     +   E+  +      G+   LL E  +         P + P GR 
Sbjct: 290 VRWAKGGPLVLLVQDRLQREERLLAADPVTGATRTLLAERDDAWLNLWPGMPAFLPDGRF 349

Query: 404 LIFSRKKDGDTGSKLYSID 422
             +  ++ G    +L + D
Sbjct: 350 -WWVTERGGAPEVELRAPD 367


>gi|119618523|gb|EAW98117.1| WD repeat and SOCS box-containing 2, isoform CRA_a [Homo sapiens]
          Length = 416

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 83/216 (38%), Gaps = 23/216 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D+
Sbjct: 131 PDVSCLVLATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDK 188

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 189 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 245

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----------- 389
             +  ++S     +SP   L+    +      I      G + R L              
Sbjct: 246 KLEGHQSSVVSCDFSPDSALLVTASYDTN--VIMWDPYTGERLRSLHHTQVDPAMDDSDV 303

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S+L++  +SP G   ++      D   ++++++L
Sbjct: 304 HISSLRSVCFSPEG---LYLATVADDRLLRIWALEL 336



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 72/247 (29%), Gaps = 41/247 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 28  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKN 87

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKRA---------------LISVQKDEAM 282
           +T+   +PK            +  +P  S   ++                L +   D  +
Sbjct: 88  ETKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLVLATGLNDGQI 147

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 148 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 206

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 207 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 264

Query: 403 SLIFSRK 409
            L+ +  
Sbjct: 265 LLVTASY 271


>gi|320159969|ref|YP_004173193.1| hypothetical protein ANT_05590 [Anaerolinea thermophila UNI-1]
 gi|319993822|dbj|BAJ62593.1| hypothetical protein ANT_05590 [Anaerolinea thermophila UNI-1]
          Length = 663

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 49/220 (22%), Positives = 74/220 (33%), Gaps = 31/220 (14%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            RDQ +    +SP    +A             +   R   AP+ +    S      FS +
Sbjct: 306 GRDQPIINLAYSPAGDALAV------GFANRVVRLWRESGAPRMVLQGESEPAQMLFSPD 359

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREG 324
           G R   S      +D++ +       ERL  +   + +       SPD S +       G
Sbjct: 360 GARLFSS-----GVDVWKL-ADG---ERL-ASSGEHFAPLNDFVLSPDGSWVALAGF--G 407

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + +L  +  +G   + I++       D    P G  +A T   G      V   DG    
Sbjct: 408 RVELRQI-QDGQILRTITEGLSGEVRDVDVFPGGQTMATTGNEGMAHLYRV--SDGRFLS 464

Query: 385 LLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            L E    L A  +SP  R L +S          LY  DL
Sbjct: 465 RLGETGPRLWAVAFSPDSRWLAWS-----GENGYLYIYDL 499



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 76/212 (35%), Gaps = 23/212 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +DG  +R +T      + +    P  Q +A       +    +L      R   R+G   
Sbjct: 415 QDGQILRTITEGLSGEVRDVDVFPGGQTMATT----GNEGMAHLYRVSDGRFLSRLGETG 470

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             + A  FS + +    S    E   +Y  DL+ +   +     ++     +SP S Q+ 
Sbjct: 471 PRLWAVAFSPDSRWLAWS---GENGYLYIYDLERDFLAKRIEEPYLATRILFSPTSQQMA 527

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVM 376
             +       + + Q NG+  + I     A   D  +SP G  +    F G    +  V+
Sbjct: 528 VLTSAG----VNLRQVNGTLVRTI---GGAGLEDLAFSPDGGTL----FVGGNQVLRAVV 576

Query: 377 KKDGSQERLLVEDSNLQAPT---WSPSGRSLI 405
             DGS       D   Q+PT    SP G  L 
Sbjct: 577 TGDGSDLWKSDYDPQ-QSPTALAVSPDGAFLA 607



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 87/269 (32%), Gaps = 30/269 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH--TISDDIYQSITGEKG 171
           G++++   + L  E R  DV    Q +             +AH   +SD  + S  GE G
Sbjct: 417 GQILRTITEGLSGEVRDVDVFPGGQTMATTGNEG------MAHLYRVSDGRFLSRLGETG 470

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--FSPNQQKVAYA 229
                + F  +S        +  +   D     +L    ++     R  FSP  Q++A  
Sbjct: 471 PRLWAVAFSPDSRWLAWSGENGYLYIYDLER-DFLAKRIEEPYLATRILFSPTSQQMAVL 529

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           T    ++ +V           + IG      LA  FS +G    +         +    +
Sbjct: 530 TSAGVNLRQVN------GTLVRTIGGAGLEDLA--FSPDGGTLFV-----GGNQVLRAVV 576

Query: 290 QSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
             + ++   +      S +    SPD     F +       + +  +   +  RI     
Sbjct: 577 TGDGSDLWKSDYDPQQSPTALAVSPDG---AFLAVGWQDGHIELRWAGSGEVLRILYGHH 633

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            +     ++PQ  L+      G     GV
Sbjct: 634 GAVTRLGFAPQSRLLLSLGQDGTVRLWGV 662


>gi|289669233|ref|ZP_06490308.1| putative dipeptidyl peptidase IV [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 729

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 66/205 (32%), Gaps = 55/205 (26%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI------------------------- 246
             L +P+ +P+  +V +    D D  ++ L    I                         
Sbjct: 21  PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWGYDIASGQTRLLVDSKIVLPGTEVLSDVE 80

Query: 247 --DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTL 301
              R  +RI     ++   +++ +    L  +      ++Y  DL+        RLT+  
Sbjct: 81  KARRERQRIAALTGIVDY-QWAPDAHALLFPL----GGELYLYDLRKTGAAAVRRLTHGE 135

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-------- 353
                A  SP    + F  +R     ++V++    +  +++ D   +  + V        
Sbjct: 136 GFATDAKLSPKGGFVSFVRER----NVWVIELASGNALQLTHDGGETIGNGVAEFVADEE 191

Query: 354 --------WSPQGDLIAFTKFSGEK 370
                   W+P    IAF +    +
Sbjct: 192 IDRHTGYWWAPDDSAIAFARIDESQ 216



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 50/342 (14%), Positives = 105/342 (30%), Gaps = 69/342 (20%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--- 217
              + +T  +G      L      VS + + ++ V++    N   LT    + +      
Sbjct: 126 AAVRRLTHGEGFATDAKLSPKGGFVSFVRERNVWVIELASGNALQLTHDGGETIGNGVAE 185

Query: 218 -------------RFSPNQQKVAYATYDDEDIL-----RVYLMDTRIDRAPKRIGNFRSM 259
                         ++P+   +A+A  D+  +       VY   T +           ++
Sbjct: 186 FVADEEIDRHTGYWWAPDDSAIAFARIDESQVPVQKRPEVYADHTEVISQRYPQAGQPNV 245

Query: 260 IL-----------APRF-----SSN----------GKRALISVQKDEAMDIYSVD--LQS 291
            +            PR+       +           +R     Q  +   +  ++  L S
Sbjct: 246 AVQLGVIAPRAKATPRWIDLGKHPDIYLARVDWRDAQRLTFQRQSRDQKTLELIETTLAS 305

Query: 292 NATERLTNTLFINISASYSP---------DSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            A   L        S ++ P         D  + ++ S+R G E LY+   +G     ++
Sbjct: 306 GAQRTLIT----ETSPTWVPLSNDLRFLKDG-RFLWNSERSGYEHLYLASEDGRTLTPLT 360

Query: 343 QDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                         Q  ++ F  +K +  +  I  +   G         +   A +++ +
Sbjct: 361 SGNWVVDGVLAVDEQAGMVYFAASKDAPTQTHIYAVPLAGGAIEKRSSTNGTHAASFA-N 419

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDPQ 441
             S+      +  T  ++     NG    TL+      SDPQ
Sbjct: 420 NASVYVDTWSNTTTPPQIELFHANGEKIATLLKN--DLSDPQ 459


>gi|282881633|ref|ZP_06290296.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
 gi|281304392|gb|EFA96489.1| OmpA family protein [Prevotella timonensis CRIS 5C-B1]
          Length = 717

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 54/143 (37%), Gaps = 22/143 (15%)

Query: 299 NTLFINISASYSPDSSQIV---FESDREGKEQLYVMQSN-------GSDQKRISQDKEAS 348
           NT     + ++SPD  ++      +D        ++ SN        +++  I+QD  +S
Sbjct: 230 NTDAEEGACAFSPDGREMYLTQCTTDATHPRYAKIVVSNRQDAAWGKANELPITQDTLSS 289

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKD----GSQERL---LVEDSNLQAPTWS 398
           Y  P  SP G  + FT           I  ++      G  E L   +    N   PT+ 
Sbjct: 290 YAHPAVSPDGQWLYFTSDMPGGMGGMDIWRVRLTAAGLGGVENLGAPINTPGNEMFPTFR 349

Query: 399 PSGRSLIFSRK-KDGDTGSKLYS 420
           P+G  L FS     G  G  ++ 
Sbjct: 350 PNGD-LYFSSDGHPGFGGLDVFI 371



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 21/134 (15%)

Query: 218 RFSPNQQKVAYA-------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSN 268
            FSP+ +++                I+     D    +A +      ++     P  S +
Sbjct: 239 AFSPDGREMYLTQCTTDATHPRYAKIVVSNRQDAAWGKANELPITQDTLSSYAHPAVSPD 298

Query: 269 GKRALISVQKD---EAMDIYSVDLQS---NATERL---TNTLFINISASYSPDSSQIVFE 319
           G+    +         MDI+ V L +      E L    NT    +  ++ P+   + F 
Sbjct: 299 GQWLYFTSDMPGGMGGMDIWRVRLTAAGLGGVENLGAPINTPGNEMFPTFRPNGD-LYFS 357

Query: 320 SDREGKEQLYVMQS 333
           SD  G      +  
Sbjct: 358 SD--GHPGFGGLDV 369



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 29/96 (30%), Gaps = 10/96 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIG- 254
           AN   +T         P  SP+ Q + + +         DI RV L    +         
Sbjct: 277 ANELPITQDTLSSYAHPAVSPDGQWLYFTSDMPGGMGGMDIWRVRLTAAGLGGVENLGAP 336

Query: 255 -NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            N     + P F  NG     S   D       +D+
Sbjct: 337 INTPGNEMFPTFRPNGD-LYFSS--DGHPGFGGLDV 369


>gi|229159334|ref|ZP_04287355.1| Acylamino-acid-releasing enzyme [Bacillus cereus R309803]
 gi|228624085|gb|EEK80890.1| Acylamino-acid-releasing enzyme [Bacillus cereus R309803]
          Length = 651

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/308 (14%), Positives = 106/308 (34%), Gaps = 54/308 (17%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIK----NSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           S+T E  D    +   +   ++ +      N + +   DG     +T   + I    ++ 
Sbjct: 62  SLTNEDIDSTCPLWSPNSRDIAYLSPVGNGNQIFIKSLDGYGGVQITDEEEGISTF-KWE 120

Query: 221 PNQQKVAYATYDDE---------------------DILRVYLMDTR----IDRAPKRIGN 255
           P  +   Y     E                         +Y ++       D+  + I  
Sbjct: 121 PTGKGFYYIAQSKECEEIKKRKERYGDFQHVGKEHQNNCLYYIEIEKVIQNDKEEREISG 180

Query: 256 FRSMILAPRF-------SSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +     F       S++G + +     S+      D+Y +D+++   +++     + 
Sbjct: 181 VYQLTDGKDFYIHGFDISNDGTQVVFMATPSLNDHMNGDLYILDVEARELQKMNIGKLLG 240

Query: 305 ISASYSPDSSQIVFE-SDREGKE--------QLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            S  +SP+ S++ +  S RE            L +   N  +  +   + +++     W+
Sbjct: 241 GSICFSPEGSKVCYSASIREKDYYRNHIQESTLEIYDMNTGEVIQPLTNFDSTVTPLQWT 300

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDT 414
            +G  I         + IG++ +DG+ E L    D  +     +  G  + +++    +T
Sbjct: 301 AKG--ILIRWQDKTNYRIGLLAEDGTVEALSDNVDGFIMDAFITKDGNHITYNKAITNET 358

Query: 415 GSKLYSID 422
             ++Y  D
Sbjct: 359 -FEIYLDD 365



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 71/231 (30%), Gaps = 45/231 (19%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI---SVQKDEAM---DIYSVDLQSNATERLT 298
           +   + + I +  + +L+   S +GK       +           ++  +     +  LT
Sbjct: 6   KTYLSIEEITSLPT-VLSTNISDDGKNVAFVKKTTNWKGNTYRNHVWVYEKDKEQSFSLT 64

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           N    +    +SP+S  I + S      Q+++   +G    +I+ ++E       W P G
Sbjct: 65  NEDIDSTCPLWSPNSRDIAYLSPVGNGNQIFIKSLDGYGGVQITDEEEGISTFK-WEPTG 123

Query: 359 DLIAFTKFS-------------GEKFAIGVMKKDG--------------------SQERL 385
               +   S             G+   +G   ++                     S    
Sbjct: 124 KGFYYIAQSKECEEIKKRKERYGDFQHVGKEHQNNCLYYIEIEKVIQNDKEEREISGVYQ 183

Query: 386 LVEDSNL--QAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNETLIN 432
           L +  +        S  G  ++F      +      LY +D+  R    +N
Sbjct: 184 LTDGKDFYIHGFDISNDGTQVVFMATPSLNDHMNGDLYILDVEARELQKMN 234



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 43/315 (13%), Positives = 98/315 (31%), Gaps = 60/315 (19%)

Query: 167 TGEKGDFNSRILFVSESVVSGI-IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           T    D  +       +   G   +N + V ++D     +   + D     P +SPN + 
Sbjct: 23  TNISDDGKNVAFVKKTTNWKGNTYRNHVWVYEKD-KEQSFSLTNEDIDSTCPLWSPNSRD 81

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-------- 277
           +AY +    +  ++++          +I +    I   ++   GK      Q        
Sbjct: 82  IAYLS-PVGNGNQIFIKSLD-GYGGVQITDEEEGISTFKWEPTGKGFYYIAQSKECEEIK 139

Query: 278 ----KDEAMD----------IYSVDLQS-----------NATERLTNTLFINISAS-YSP 311
               +               +Y ++++            +   +LT+     I     S 
Sbjct: 140 KRKERYGDFQHVGKEHQNNCLYYIEIEKVIQNDKEEREISGVYQLTDGKDFYIHGFDISN 199

Query: 312 DSSQIVFESDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--- 364
           D +Q+VF +     +     LY++     + +++    +       +SP+G  + ++   
Sbjct: 200 DGTQVVFMATPSLNDHMNGDLYILDVEARELQKM-NIGKLLGGSICFSPEGSKVCYSASI 258

Query: 365 --------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTG 415
                           I  M   G   + L    +   P  W+  G  + +       T 
Sbjct: 259 REKDYYRNHIQESTLEIYDMNT-GEVIQPLTNFDSTVTPLQWTAKGILIRW----QDKTN 313

Query: 416 SKLYSIDLNGRNETL 430
            ++  +  +G  E L
Sbjct: 314 YRIGLLAEDGTVEAL 328


>gi|149720611|ref|XP_001489381.1| PREDICTED: similar to WD SOCS-box protein 2 [Equus caballus]
          Length = 418

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 83/216 (38%), Gaps = 23/216 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D+
Sbjct: 133 PDVSCLILATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDK 190

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 191 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 247

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----------- 389
             +  ++S     +SP   L+    +      I      G + R L              
Sbjct: 248 KLEGHQSSVVSCDFSPDSALLVTASYDTN--VIMWDPYTGERLRSLHHTQLDPPMDDSDV 305

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S+L++  +SP G   ++      D   ++++++L
Sbjct: 306 HISSLRSVCFSPEG---LYLATVADDRLLRIWALEL 338



 Score = 40.0 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 82/278 (29%), Gaps = 42/278 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 30  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKS 89

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKR---------------ALISVQKDEAM 282
           D++   +PK            +  +P  S   ++                L +   D  +
Sbjct: 90  DSKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLILATGLNDGQI 149

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 150 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 208

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 209 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 266

Query: 403 SLIFSRKKDGDTGSKLYS-IDLNGRNETLINTPAYASD 439
            L+ +           Y+   L   + T ++ P   SD
Sbjct: 267 LLVTASYDTNVIMWDPYTGERLRSLHHTQLDPPMDDSD 304


>gi|42783482|ref|NP_980729.1| TolB domain-containing protein [Bacillus cereus ATCC 10987]
 gi|42739411|gb|AAS43337.1| tolB domain protein [Bacillus cereus ATCC 10987]
          Length = 412

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/271 (15%), Positives = 90/271 (33%), Gaps = 59/271 (21%)

Query: 172 DFNSRILFVSESVVSGI----IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            F S I  +              + L +   DG   +     + + +  P++S + + +A
Sbjct: 14  IFLSSITIIKAENSGVKIAFVRHHDLWI-KIDGKEKQIT---KGEYIIGPKWSHDGEWIA 69

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y     ++ L +Y ++       K++   +S +   ++S                 + + 
Sbjct: 70  YVKGKKQNTLELYRLEDG-----KKVRPLQSEVSNYQWSPKENTIAFVFAN----TLNTF 120

Query: 288 DLQSNATERLTNTLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           D+Q           F N+SA     ++ PD  +    S+       +     G+    + 
Sbjct: 121 DVQKKNV------DFENVSAGVGDYAWYPDGKKFFVSSEAHLLPTGWT----GAQLYEVQ 170

Query: 343 QDKEAS---------------------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVM 376
           +D   +                          WSP    I+F       +S +   + ++
Sbjct: 171 KDAHMNPHKMKHLYALPNEHDDFLALVASGFKWSPDQKWISFLAVPTASWSADSNTLCLV 230

Query: 377 KKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIF 406
           + DGS+ E++     N Q   WSPS   L +
Sbjct: 231 RADGSRFEKVDQMLLNAQWFQWSPSKNILAY 261



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 10/87 (11%)

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  IAF +       I        +E+ + +   +  P WS  G  + + + K      +
Sbjct: 28  GVKIAFVRHHDLWIKID------GKEKQITKGEYIIGPKWSHDGEWIAYVKGKK-QNTLE 80

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           LY ++ +G+    + +    S+ QW  
Sbjct: 81  LYRLE-DGKKVRPLQS--EVSNYQWSP 104



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 54/133 (40%), Gaps = 18/133 (13%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +I F    +    L++ + +G + K+I++ +      P WS  G+ IA+ K   +   
Sbjct: 28  GVKIAFVRHHD----LWI-KIDGKE-KQITKGEY--IIGPKWSHDGEWIAYVKGKKQN-T 78

Query: 373 IGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           + + +  DG + R L   S +    WSP   ++ F         + L + D+  +N    
Sbjct: 79  LELYRLEDGKKVRPL--QSEVSNYQWSPKENTIAFV------FANTLNTFDVQKKNVDFE 130

Query: 432 NTPAYASDPQWVG 444
           N  A   D  W  
Sbjct: 131 NVSAGVGDYAWYP 143



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 72/198 (36%), Gaps = 21/198 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALI 274
           ++SP+Q+ +++                 +     R      M+L     ++S +      
Sbjct: 202 KWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNAQWFQWSPSKNILAY 261

Query: 275 SVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREG----- 324
            ++    + + +  L+      L     T   +++   ++  D+  IV  +   G     
Sbjct: 262 -IEGSGRVALENKHLKVKELPALQQNTFTPKGYVDWDFAWKNDNIIIVSRAKEGGFETLP 320

Query: 325 ----KEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                  LY + S  + Q RI+    +   + P++  + + + + +   +K  + +  +D
Sbjct: 321 EKRPLPSLYEVDSTSNVQHRITKPPHKQGDYHPIFMKKSNQLIWIRSDRKKADVWLAHRD 380

Query: 380 GSQERLLVEDSNLQAPTW 397
           G  E   +E  N+  P W
Sbjct: 381 GKHEMKWIE--NIDVPEW 396


>gi|46105154|ref|XP_380381.1| hypothetical protein FG00205.1 [Gibberella zeae PH-1]
          Length = 1432

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 65/201 (32%), Gaps = 22/201 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFSSNGKRA 272
            +SP+ + +   + D      V L D           +       +      FS++GK  
Sbjct: 795 AYSPDDKWLVSGSKDG----TVKLWDAESGTCIHTCTHQGDEGRDTPTYHTTFSNDGKS- 849

Query: 273 LISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +S  KD  + I+  DL +     R         + + S D     +   R     + + 
Sbjct: 850 FVSASKDGNVAIW--DLSTGNLISRQRAHKVETWTMAMSSDGCTFAYLLTRT---IVLIW 904

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             N S   RI    E +      SP G+ +A     G      V         +L  +  
Sbjct: 905 DRNTSISFRIFSYPEEAVSL-ALSPGGEYLAAINGQG----CMVRNTLNGNLTMLTSNYG 959

Query: 392 LQAPTWSPSGRSLIFSRKKDG 412
             + TWS  G  L  S  +DG
Sbjct: 960 PSSATWSTDGLFLA-SAGRDG 979



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 63/210 (30%), Gaps = 19/210 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTP-----SRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           VSG    ++ + D +     +         RD   +   FS + +    A+ D      V
Sbjct: 804 VSGSKDGTVKLWDAESGTCIHTCTHQGDEGRDTPTYHTTFSNDGKSFVSASKDG----NV 859

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D        R    +        SS+G      + +     +   D  ++ + R+ +
Sbjct: 860 AIWDLSTGNLISRQRAHKVETWTMAMSSDGCTFAYLLTR---TIVLIWDRNTSISFRIFS 916

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                +S + SP    +   +     +   V  +   +   ++           WS  G 
Sbjct: 917 YPEEAVSLALSPGGEYLAAIN----GQGCMVRNTLNGNLTMLT--SNYGPSSATWSTDGL 970

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +A +        +       S  +L V+ 
Sbjct: 971 FLA-SAGRDGFIEVWEWHAGQSNPKLRVQG 999


>gi|307727132|ref|YP_003910345.1| 40-residue YVTN family beta-propeller repeat-containing protein
           [Burkholderia sp. CCGE1003]
 gi|307587657|gb|ADN61054.1| 40-residue YVTN family beta-propeller repeat protein [Burkholderia
           sp. CCGE1003]
          Length = 492

 Score = 55.8 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 72/201 (35%), Gaps = 20/201 (9%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----------RFSSNGKRALIS 275
            YA     + + V            R+G+      +P            FS + K   + 
Sbjct: 45  VYAAEQFSNTVSVTDPADNRLLGVIRLGDPSPTNFSPLYRGQVLVHGMGFSPDHKTIAVV 104

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                +  +  +D  +NA + +T        A ++PD  + V+ + R G+  + V+ +  
Sbjct: 105 SI--GSNSVSFIDTATNAVKHVTYVGRSPHEAFFTPDGKE-VWVTVR-GENYVSVLDAAT 160

Query: 336 -SDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             ++ RI+    A     ++SP G      + F+ E   I V        ++  +     
Sbjct: 161 FEEKTRIT--VPAGPGMQIFSPDGKYGYVCSSFNPETDVISVADHQI-VAKVKQDSPFCP 217

Query: 394 APTWSPSGRSLIFSRKKDGDT 414
               SP G+ + F+ K  G T
Sbjct: 218 NIAASPDGKEVWFTLKDVGRT 238



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 82/231 (35%), Gaps = 17/231 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+ ++V + T   E+ + V    T  ++    +     M +   FS +GK   +    
Sbjct: 136 FTPDGKEV-WVTVRGENYVSVLDAATFEEKTRITVPAGPGMQI---FSPDGKYGYVCSSF 191

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   D+ SV        ++        + + SPD  ++ F     G+ Q++  Q      
Sbjct: 192 NPETDVISV-ADHQIVAKVKQDSPFCPNIAASPDGKEVWFTLKDVGRTQVFEAQPPFRLL 250

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW- 397
           K +      ++ + V +  G   A+    G    + V +    ++   +   NL    W 
Sbjct: 251 KTLDTGPITNHVNLVKNSNGTF-AYVTV-GGLNEVKVYRTGTFEQVATIPVGNLPHGIWP 308

Query: 398 SPSGRSLIFSRKKDGD--------TGSKLYSIDLNGRNETLINTPAYASDP 440
           S  G  + +   ++GD        T   +  I +    + +   P    + 
Sbjct: 309 SGDGTRV-YVGLENGDALAAIDTLTNKVIAQIPIGQAPQAVTYVPGAVPEG 358



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 16/160 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A  +     +  +      +    K +           F+ +GK   ++V+ 
Sbjct: 94  FSPDHKTIAVVSIGSNSVSFIDTATNAV----KHVTYVGRSPHEAFFTPDGKEVWVTVR- 148

Query: 279 DEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQ-IVFESDREGKEQLYVMQSNGS 336
                +  +D  +     R+T      +   +SPD     V  S     + + V      
Sbjct: 149 -GENYVSVLDAATFEEKTRITVPAGPGMQ-IFSPDGKYGYVCSSFNPETDVISVAD---- 202

Query: 337 DQKRISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAIG 374
             + +++ K+ S F P    SP G  + FT     +  + 
Sbjct: 203 -HQIVAKVKQDSPFCPNIAASPDGKEVWFTLKDVGRTQVF 241


>gi|302506076|ref|XP_003014995.1| NACHT and WD40 domain protein [Arthroderma benhamiae CBS 112371]
 gi|291178566|gb|EFE34355.1| NACHT and WD40 domain protein [Arthroderma benhamiae CBS 112371]
          Length = 1668

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 76/236 (32%), Gaps = 35/236 (14%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            PS+ +    P FS +   +   +    ++    + DT        I + +    AP    
Sbjct: 953  PSQARHFISPAFSKDGTLITSISGPATEVKSFRVWDTTTGALLNTIEHLKDADFAPS--- 1009

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINI--SASYSPDSS-QIVFESDR 322
              ++ ++SV    ++ I   D  +    R+  T     +   S S+SPD    IV+ +  
Sbjct: 1010 --EKLVVSVNFSNSVKIS--DAVTGTVTRVLETTGHGNSAIHSVSFSPDGKLVIVWAAQ- 1064

Query: 323  EGKEQLYVMQSNGSDQKRIS-----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                 + V         +        +   +     +S    LI      G       M 
Sbjct: 1065 ---MLVQVWDVESGTMLKTLERCHCPNNFGTPRHLAFSSDNKLIG-ASIMGGHPETWSMT 1120

Query: 378  -----KDGSQERLLVEDSNLQAPTWSPSGRSLIF-----SRKKDGDTGSKLYSIDL 423
                 +DGS    L         T+SP  + +       ++  D    S LY+ID 
Sbjct: 1121 CIWNAEDGSVVYQL---KGCYTYTFSPDSKLIALAIAGKTQILDVRKRSVLYTIDA 1173



 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 85/267 (31%), Gaps = 44/267 (16%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                 L + D     +  L  + + +     FSP+   +A  +   ++++R++ M T   
Sbjct: 1248 NWACYLRLWDVASGELVELFKNSNSV----SFSPDGTVMA--SGSPDNLIRIWDMPTPTS 1301

Query: 248  RAPKRIGN----------------------FRSMILAPRFSSNGKRAL---ISVQKDEAM 282
                 I N                      +   I A   S +GK A      +    A 
Sbjct: 1302 AHFIPILNKAKDSIKRLWSAPAPEEKIASAYGGNIFALVLSPDGKLAASGGCGLDATGAP 1361

Query: 283  DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
             +     +    ++      I+ +  + P   ++V  +D  G   L    +   ++  + 
Sbjct: 1362 VVIWDVAKGVPLQQSKLNYSIDKNILFWPSDKRLV-SADAYGW--LVTWDTTSLEELPMI 1418

Query: 343  QDKEASYFDPVWSPQGD--LIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSN--LQAPT 396
                    +   SP     L+A   +  E       +   +  +  L +   +  ++A T
Sbjct: 1419 DKSHRLVLNMAISPNEGMVLVALDTYPPELMHEEYHIYDFNTGKLLLELNGRHAKVEALT 1478

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +SP  R +     +      K++S D 
Sbjct: 1479 FSPDSRLIATGSSR----TVKVWSTDT 1501



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 63/172 (36%), Gaps = 30/172 (17%)

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS--------- 314
             FS + K   +++    A     +D++  +    T     N+  ++S D           
Sbjct: 1141 TFSPDSKLIALAI----AGKTQILDVRKRSV-LYTIDACTNV--AFSLDGKLALAQAELE 1193

Query: 315  -----QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                 QI F +   GK     +  NGS     ++ +       V+SP G L+A   ++  
Sbjct: 1194 ILGATQISFRAAATGKPTGTTIYLNGSSTPD-TELRHMDVDHMVFSPDGKLLATYNWA-- 1250

Query: 370  KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               + +      +   L ++SN  + ++SP G  +        D   +++ +
Sbjct: 1251 -CYLRLWDVASGELVELFKNSN--SVSFSPDGTVMA---SGSPDNLIRIWDM 1296


>gi|288927607|ref|ZP_06421454.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108]
 gi|288330441|gb|EFC69025.1| OmpA family protein [Prevotella sp. oral taxon 317 str. F0108]
          Length = 676

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 58/170 (34%), Gaps = 27/170 (15%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQL 328
             +S + D+        +Q        NT +   + ++SPD   + F    +D       
Sbjct: 193 IFVSERDDKGKWSKPEPVQGGL-----NTEYDEGACTFSPDQRTMYFTQCATDPNYPRYA 247

Query: 329 YVMQSNGSDQKR-------ISQDKEASYFDPVWSPQGDLIAFTKFSGEK------FAIGV 375
            VM S  SD          IS+D  +S+  P  SP G  + F             + I +
Sbjct: 248 QVMTSARSDAAWAKATKLDISKDTLSSFAHPAVSPDGQWLYFVSDMPGGQGGQDLWRIRL 307

Query: 376 MKKDGSQERLLVED----SNLQAPTWSPSGRSLIFSRKKD-GDTGSKLYS 420
                 +   L E      N   PT+ P+G  L FS     G  G  +Y 
Sbjct: 308 TTNGLGEMENLGETINTAGNECFPTFRPNGD-LYFSSDGHVGLGGLDVYV 356



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 61/189 (32%), Gaps = 35/189 (18%)

Query: 264 RFSSNGKRALIS---VQKDEAMDIYSV-----DLQSNATERLT---NTLFINISASYSPD 312
            FS + +    +      +       +     D       +L    +TL      + SPD
Sbjct: 224 TFSPDQRTMYFTQCATDPNYPRYAQVMTSARSDAAWAKATKLDISKDTLSSFAHPAVSPD 283

Query: 313 SSQIVFESDR---EGKEQLYVMQSNGSDQKRI-----SQDKEASYFDPVWSPQGDLIAFT 364
              + F SD    +G + L+ ++   +    +     + +   +   P + P GDL  + 
Sbjct: 284 GQWLYFVSDMPGGQGGQDLWRIRLTTNGLGEMENLGETINTAGNECFPTFRPNGDL--YF 341

Query: 365 KFSG----EKFAIGVMKKDGSQERL-------LVEDSNLQAPTW-SPSGRSLIFSRKKDG 412
              G        + V +++  Q          L  + +    T+  P  R   FS  +  
Sbjct: 342 SSDGHVGLGGLDVYVARQNTDQRWTIEHLGFPLNSNGDDFGLTFEGPYNRGF-FSSNRGD 400

Query: 413 DTGSK-LYS 420
             G   +Y+
Sbjct: 401 ARGWDHIYA 409



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 63/207 (30%), Gaps = 60/207 (28%)

Query: 265 FSS-----NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +S      +  +   S  ++E         + +A   +T     +            +F 
Sbjct: 156 YSPMYFGDDHNKLYFSSTRNE--------AKGDALSGITGAKPAD------------IFV 195

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------------- 365
           S+R+ K +    +           + E       +SP    + FT+              
Sbjct: 196 SERDDKGKWSKPEPVQGGL-----NTEYDEGACTFSPDQRTMYFTQCATDPNYPRYAQVM 250

Query: 366 ---FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSI 421
               S   +A    K D S++ L    S+   P  SP G+ L F      G  G  L+ I
Sbjct: 251 TSARSDAAWAKAT-KLDISKDTL----SSFAHPAVSPDGQWLYFVSDMPGGQGGQDLWRI 305

Query: 422 DLN----GRNETL---INTPAYASDPQ 441
            L     G  E L   INT      P 
Sbjct: 306 RLTTNGLGEMENLGETINTAGNECFPT 332



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 44/135 (32%), Gaps = 24/135 (17%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP----KRIG---NFRSMILAPRFSSN 268
            P  SP+ Q + + +          L   R+        + +G   N       P F  N
Sbjct: 277 HPAVSPDGQWLYFVSDMPGGQGGQDLWRIRLTTNGLGEMENLGETINTAGNECFPTFRPN 336

Query: 269 GKRALISVQKD---EAMDIYSVDLQSNATERLT--------NTLFINISASYSPDSSQIV 317
           G     S         +D+Y    + N  +R T        N+   +   ++    ++  
Sbjct: 337 GD-LYFSSDGHVGLGGLDVYV--ARQNTDQRWTIEHLGFPLNSNGDDFGLTFEGPYNRGF 393

Query: 318 FESDRE---GKEQLY 329
           F S+R    G + +Y
Sbjct: 394 FSSNRGDARGWDHIY 408


>gi|209524271|ref|ZP_03272821.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
 gi|209495362|gb|EDZ95667.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
          Length = 672

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 80/266 (30%), Gaps = 27/266 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    S+ + + +   +          +     SPN +++   ++D   +       T 
Sbjct: 381 SGSADQSIRLWNLNTGQLIQRFCGHVAAINAIAISPNGRRLVSGSFDRTLLGWNLNTGTM 440

Query: 246 IDRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
            DR     G+  S    P     +S +G              I   + ++     RL   
Sbjct: 441 TDRFFSHSGSPYSHRCGPIHAVAYSPDGHIIA---SCSGNATIKLWNQRNGELLYRLCEH 497

Query: 301 LF--INISASYSP------------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                 ++ ++SP                 +F S      Q+ + Q       +      
Sbjct: 498 SGEVFCVTFAFSPANNSGNHEGLFNHPQSSIFASG-GADGQIKIWQFGKLHSLQTLTGHS 556

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                  +SP    I  +        +   ++        V+ + + +   SP G+   F
Sbjct: 557 GGVLSLAFSPN-QTILASSSEDGTIKLWDFQQGIILSTQTVDPAIISSIAISPDGK---F 612

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLIN 432
                 D   +L+ I++ G ++  ++
Sbjct: 613 MAGGSNDGKIRLWKIEMQGLSQQPLS 638



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 74/240 (30%), Gaps = 37/240 (15%)

Query: 200 GAN--IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           G N   + +       +     SPN+    Y          + L +    +  +R     
Sbjct: 351 GTNWECQTIMKGHKAPVNAIAISPNR----YILISGSADQSIRLWNLNTGQLIQRFCGHV 406

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISAS-------- 308
           + I A   S NG+R + S   D  +  +  +L +     R  +      S          
Sbjct: 407 AAINAIAISPNGRRLV-SGSFDRTLLGW--NLNTGTMTDRFFSHSGSPYSHRCGPIHAVA 463

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGD------- 359
           YSPD   I   S   G   + +      +   +      E       +SP  +       
Sbjct: 464 YSPDGHIIASCS---GNATIKLWNQRNGELLYRLCEHSGEVFCVTFAFSPANNSGNHEGL 520

Query: 360 ------LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                  I  +  +  +  I    K  S + L      + +  +SP+ ++++ S  +DG 
Sbjct: 521 FNHPQSSIFASGGADGQIKIWQFGKLHSLQTLTGHSGGVLSLAFSPN-QTILASSSEDGT 579


>gi|195166006|ref|XP_002023826.1| GL27199 [Drosophila persimilis]
 gi|194105986|gb|EDW28029.1| GL27199 [Drosophila persimilis]
          Length = 344

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 69/190 (36%), Gaps = 19/190 (10%)

Query: 239 VYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           V + D R D   K   + +     +++   SS+G+    S   D  M ++  D ++   +
Sbjct: 77  VKVWDIREDNTLKLRHSLKGHALGVVSVAVSSDGQTIA-SSSLDSTMCLW--DARTGDKK 133

Query: 296 RL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPV 353
            L T       +  +SP   + V     +GK  + +        +++   +   Y     
Sbjct: 134 HLLTFGPVDLWTVGFSP-CDKYVISGLNDGK--ISMYSVETGKAEQVLDAQNGKYTLSIA 190

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKD 411
           +SP G  IA     G    I +      +    +E   +   +  +SP+ + L+      
Sbjct: 191 YSPDGKYIASGAIDG---IITIFDVAAGKVAQTLEGHAMPVRSLCFSPNSQMLLTGSD-- 245

Query: 412 GDTGSKLYSI 421
            D   KLY +
Sbjct: 246 -DGHMKLYDV 254



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 13/168 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   + L     +      +SP+ + +A    D      + + D    +  + +      
Sbjct: 172 GKAEQVLDAQNGKYTLSIAYSPDGKYIASGAIDG----IITIFDVAAGKVAQTLEGHAMP 227

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + +  FS N  + L++   D  M +Y V   S+    L+      +  S+S D  +    
Sbjct: 228 VRSLCFSPN-SQMLLTGSDDGHMKLYDV-AHSDVVGTLSGHASWVLCVSFSEDGKRFA-S 284

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTK 365
           S  +   +++    + S++K +    E S   +   +SP  D +    
Sbjct: 285 SSSDRSVKIW----DSSERKCLHTFNEHSDQVWSVRYSPGNDKVISAS 328


>gi|225554280|gb|EEH02580.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 573

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 58/415 (13%), Positives = 129/415 (31%), Gaps = 81/415 (19%)

Query: 45  YSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW- 103
             P   A  +       G ++S  V   L        +  D        P       DW 
Sbjct: 195 AYPDPRASPQIHRPTPPGQQLSYRVGNTLAD------LDPDKLP-----PSQKREGSDWY 243

Query: 104 --------NSLGAQVL-------VTGRVIKEGKDRLRV-----EFRLWDVKDRKQIIGKK 143
                     L   ++       V   V      +          +++DV   + +   +
Sbjct: 244 AVFNPEVPRVLDVDLVHHLVHDSVVCCVRFSNDGKYVATGCNRSAQIFDVATGQLVTALQ 303

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV---SGIIKNSLCVMDRDG 200
                           DD   S+  ++GD   R +  S       +G     + V D   
Sbjct: 304 ----------------DD---SVLDKEGDLYIRSVCFSPDGRYLATGAEDKQIRVWDIAT 344

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             I+++    +Q ++   F+ N + +A  + D      V L D  +D   + I +    +
Sbjct: 345 RTIKHIFSGHEQDIYSLDFARNGRYIASGSGDK----TVRLWDI-VDGKQELILSIEDGV 399

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTN---TLFINISASYSPDSSQI 316
                S +G+    +   D+++ ++  D  +    ERL N    +    S +++P+   +
Sbjct: 400 TTVAISPDGRFVA-AGSLDKSVRVW--DTTTGYLVERLENPDGHMDSVYSVAFAPNGRDL 456

Query: 317 VFESDREGKEQLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           V  S  +   +++ +             G    R  +  +        +P G  +     
Sbjct: 457 VSGSL-DKTIKMWELTPPRGMVPGAGPKGGKCVRTFEGHKDFVLSVCLTPDGRWVMSGSK 515

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 +          +++++       + +PS    +F+    GD  ++++S 
Sbjct: 516 DRG---VQFWDPATGNAQMMLQGHKNSVISVAPSPTGNLFATG-SGDMRARIWSY 566


>gi|209526336|ref|ZP_03274865.1| WD-40 repeat protein [Arthrospira maxima CS-328]
 gi|209493265|gb|EDZ93591.1| WD-40 repeat protein [Arthrospira maxima CS-328]
          Length = 191

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 69/198 (34%), Gaps = 14/198 (7%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           + +       + L           +      + A   + +GKRA+ S   D  + ++ ++
Sbjct: 4   SVFSLSKNTTLKLWYLATGTELATLTGHSRGVNAVAIAPDGKRAV-SASSDNTLKLWDLE 62

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            +      L    +   + + +PD  + V  S     + L +     + +    +    S
Sbjct: 63  -RGRELATLRGHSWSVNAVAIAPDGFRAVSASM---DKTLKLWDLERATELATLRGHSWS 118

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS 407
                 +P G   A +    +   +     +  +       D+++ +   +P G +++  
Sbjct: 119 VNAVAIAPDGKR-AVSASDDKTLKLW--DLETGEVLATFTGDADMLSCAVAPDGVTVV-- 173

Query: 408 RKKDGDTGSKLYSIDLNG 425
               GD+G ++Y + L G
Sbjct: 174 ---AGDSGGRMYFLRLEG 188


>gi|212711584|ref|ZP_03319712.1| hypothetical protein PROVALCAL_02659 [Providencia alcalifaciens DSM
           30120]
 gi|212685686|gb|EEB45214.1| hypothetical protein PROVALCAL_02659 [Providencia alcalifaciens DSM
           30120]
          Length = 442

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 53/156 (33%), Gaps = 20/156 (12%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVFES-DREGKEQLY 329
              +      +    +RLT T       +      +   SP+   I     D +G  QL+
Sbjct: 287 GTRNSMPAPPKGVQQKRLTYTHQRKFPGLAKQPRHWLRSSPNGELIACLMHDNQGIVQLW 346

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            + +      +++ +         W+  G+ + F   +    +I            L + 
Sbjct: 347 TVGTATGVLTQVTFENSPIQSAFSWNNTGEYLCFVHDN----SIVRCHVATGSIERLTQR 402

Query: 390 SN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           ++      A  +SP+ + + F R  DG    ++Y +
Sbjct: 403 TDAAPVADAVVFSPNDKFVAFMRDVDGFR--QIYIV 436



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 59/171 (34%), Gaps = 17/171 (9%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-----NFRSMILAPR-F---SSNGKRA 272
           + +K    +++     R  +         KR+       F  +   PR +   S NG+  
Sbjct: 273 DPEKFKIPSHEPLQGTRNSMPAPPKGVQQKRLTYTHQRKFPGLAKQPRHWLRSSPNGELI 332

Query: 273 L-ISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYV 330
             +       + +++V   +    ++T     I  + S++     + F  D      +  
Sbjct: 333 ACLMHDNQGIVQLWTVGTATGVLTQVTFENSPIQSAFSWNNTGEYLCFVHDNS----IVR 388

Query: 331 MQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                   +R++Q  +A+      V+SP    +AF +       I +++  
Sbjct: 389 CHVATGSIERLTQRTDAAPVADAVVFSPNDKFVAFMRDVDGFRQIYIVETG 439



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 58/156 (37%), Gaps = 16/156 (10%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             +   G+ +  L    +     R       Q     R SPN + +A   +D++ I++++
Sbjct: 292 MPAPPKGVQQKRLTYTHQ-----RKFPGLAKQPRHWLRSSPNGELIACLMHDNQGIVQLW 346

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + T      +       +  A  +++ G+             I    + + + ERLT  
Sbjct: 347 TVGTATGVLTQVTFENSPIQSAFSWNNTGEYLCFVHDNS----IVRCHVATGSIERLTQR 402

Query: 301 LFINISAS-----YSPDSSQIVFESDREGKEQLYVM 331
              + +       +SP+   + F  D +G  Q+Y++
Sbjct: 403 T--DAAPVADAVVFSPNDKFVAFMRDVDGFRQIYIV 436


>gi|194042982|ref|XP_001926012.1| PREDICTED: WD repeat and SOCS box-containing protein 2-like [Sus
           scrofa]
          Length = 407

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 83/216 (38%), Gaps = 23/216 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D+
Sbjct: 122 PDVSCLILATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDK 179

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 180 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 236

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----------- 389
             +  ++S     +SP   L+    +      I      G + R L              
Sbjct: 237 KLEGHQSSVVSCDFSPDSALLVTASYDTN--VIMWDPYTGERLRSLHHTQLSPPMDDSDV 294

Query: 390 --SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S+L++  +SP G   ++      D   ++++++L
Sbjct: 295 HISSLRSVCFSPEG---LYLATVADDRLLRIWALEL 327



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 82/278 (29%), Gaps = 42/278 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 19  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKN 78

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKR---------------ALISVQKDEAM 282
           DT+   +PK            +  +P  S   ++                L +   D  +
Sbjct: 79  DTKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLILATGLNDGQI 138

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 139 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 197

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 198 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 255

Query: 403 SLIFSRKKDGDTGSKLYS-IDLNGRNETLINTPAYASD 439
            L+ +           Y+   L   + T ++ P   SD
Sbjct: 256 LLVTASYDTNVIMWDPYTGERLRSLHHTQLSPPMDDSD 293


>gi|224536108|ref|ZP_03676647.1| hypothetical protein BACCELL_00973 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522279|gb|EEF91384.1| hypothetical protein BACCELL_00973 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 667

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/155 (23%), Positives = 56/155 (36%), Gaps = 27/155 (17%)

Query: 299 NTLFINISASYSPDSSQIVFESDRE-----GKEQLYVMQSNGSDQKR-----ISQDKEAS 348
           N+ F   + S+S D   + F   R         ++YV Q  G++        I  D  +S
Sbjct: 234 NSEFEEGACSFSSDGKTMYFTRCRTLPNAPAYAEIYVSQRAGAEWGAPQKCAILNDTLSS 293

Query: 349 YFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQER-----LLVEDSNLQAPTW 397
              PV SP GD + F             + I + + DG          +   ++   PT+
Sbjct: 294 VAHPVLSPAGDYLYFVSDMPGGQGGLDLWRINITR-DGFGYVDNLGPEINTSADEMFPTF 352

Query: 398 SPSGRSLIFSRK-KDGDTGSKLYSI---DLNGRNE 428
           SP G  L FS     G  G  ++      L GR  
Sbjct: 353 SPDGT-LYFSSTGHPGMGGLDIFRAITDSLTGRWR 386



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 84/272 (30%), Gaps = 39/272 (14%)

Query: 149 ASWRK---IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
             W+K   +A  ++ +  +       D  +       ++ +      + V  R GA    
Sbjct: 221 KQWQKPEPLASEVNSEFEEGACSFSSDGKTMYFTRCRTLPNAPAYAEIYVSQRAGAEWGA 280

Query: 206 -----LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR----APKRIG-- 254
                +       +  P  SP    + + +        + L    I R        +G  
Sbjct: 281 PQKCAILNDTLSSVAHPVLSPAGDYLYFVSDMPGGQGGLDLWRINITRDGFGYVDNLGPE 340

Query: 255 -NFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQS-NATERL------TNTLFI 303
            N  +  + P FS +G     S         +DI+     S     R+       N+   
Sbjct: 341 INTSADEMFPTFSPDGT-LYFSSTGHPGMGGLDIFRAITDSLTGRWRIENMQFPVNSQGD 399

Query: 304 NISASYSPDS-SQIVFESDRE---GKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQ 357
           +   ++ P + ++  F S+R    G + +Y  +        K +  DKE           
Sbjct: 400 DFGMTFEPGAPNRGFFSSNRGDARGWDHIYSFEFPEVHHVLKGLVYDKEGDALSDA---- 455

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
             L+      G    I V KKDG+  + L   
Sbjct: 456 --LVTLVGDDGTYLKINV-KKDGTFTQELAPG 484


>gi|50309993|ref|XP_455010.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644145|emb|CAH00097.1| KLLA0E23453p [Kluyveromyces lactis]
          Length = 826

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 83/229 (36%), Gaps = 28/229 (12%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPS-------------RDQILFEPRFSPNQQKVAYAT 230
             +G   +++ V   DG+ ++ + PS                 ++   FSP+ + +  A+
Sbjct: 513 TAAGFQDSTIKVWYLDGSPLQSILPSKAKDQSNSATLVGHSGPVYSVAFSPDNRYLLSAS 572

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D    +R++ +DT       +  N    +   +FS  G    I+   D+   ++S D  
Sbjct: 573 ED--KTVRLWSLDTFTCLVCYKGHNHP--VWYVKFSPLGHY-FITASHDQTARLWSCDHI 627

Query: 291 SNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                R+ +    ++  S + P+    VF    +   +++       D  R+     +  
Sbjct: 628 Y--PLRIFSGHLNDVDCSTFHPNGCY-VFTGSSDKTCRMW--DIQTGDSVRLFLGHTSPV 682

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                SP G  +      G    I V    G+ +R+     + + P +S
Sbjct: 683 TALEVSPDGRWLTTGSEDGT---IIVWDI-GTGKRIKQMKGHGKNPIYS 727



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 67/224 (29%), Gaps = 20/224 (8%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             +     D   +  +     +       +      + +  FS + +  L S  +D+ + 
Sbjct: 520 STIKVWYLDGSPLQSILPSKAKDQSNSATLVGHSGPVYSVAFSPDNRYLL-SASEDKTVR 578

Query: 284 IYSVDLQSNATERLTNTLFINISASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++S+D        L      N    +    SP     +  S     +   +   +     
Sbjct: 579 LWSLD----TFTCLVCYKGHN-HPVWYVKFSPLGHYFITASH---DQTARLWSCDHIYPL 630

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           RI            + P G  + FT  S +   +  ++   S    L   S + A   SP
Sbjct: 631 RIFSGHLNDVDCSTFHPNGCYV-FTGSSDKTCRMWDIQTGDSVRLFLGHTSPVTALEVSP 689

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            GR L       G     +   D+ G  + +     +  +P + 
Sbjct: 690 DGRWL-----TTGSEDGTIIVWDI-GTGKRIKQMKGHGKNPIYS 727


>gi|197263296|ref|ZP_03163370.1| f416 [Salmonella enterica subsp. enterica serovar Saintpaul str.
           SARA23]
 gi|197241551|gb|EDY24171.1| f416 [Salmonella enterica subsp. enterica serovar Saintpaul str.
           SARA23]
          Length = 408

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 51/161 (31%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W P G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN----RIACCDAQSGRIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP+GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPNGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 352

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SP+   + +  + +G  QL+V 
Sbjct: 353 --RIACCDAQSGRIDFLTARHDNPPSADAVVFSPNGRHVAWMEEVKGFRQLWVT 404



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 162 IYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +Y  +T E   +   N +   ++  +        L ++   G   R LT     +     
Sbjct: 279 VYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFN 338

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+ + +      +  I        RID    R  N  S   A  FS NG+      + 
Sbjct: 339 WHPSGKWLGLVL--ENRIACCDAQSGRIDFLTARHDNPPSAD-AVVFSPNGRHVAWMEEV 395

Query: 279 DEAMDIYS 286
                ++ 
Sbjct: 396 KGFRQLWV 403


>gi|291571257|dbj|BAI93529.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 1718

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 65/171 (38%), Gaps = 14/171 (8%)

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            R+    S +L    S +G     +   D    ++ +D      + L +   +  S S+S 
Sbjct: 1046 RLQGHTSSVLGVAVSPDGNFIA-TASNDHTAKVWGID--GLWLQNLPHQNSV-TSISFSE 1101

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGE 369
            D SQ +  +  + +  ++V        + +      EA      +SPQGDLIA +     
Sbjct: 1102 D-SQFLGTTTADNQVTIWVWDEQQQQFQYLHNLVGHEALVTRVKFSPQGDLIATSSNDNT 1160

Query: 370  KFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
               I + + DG+  R+L      +    ++  G+ L        D   +L+
Sbjct: 1161 ---IRLWRPDGTIIRVLEGHTDRVLDVEFNSDGQKLA---SAGKDKTVRLW 1205



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 93/266 (34%), Gaps = 28/266 (10%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VSG    +L + D +           ++ +    FSP+ + +A  + DD     V +   
Sbjct: 1246 VSGSSDRTLKIWDLEQQREIRTLKGHNEEVLTVLFSPDGEVIASGSRDD----TVKIWGF 1301

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                    +   ++ + +  F+ + K  + S   D  + ++S      A   +  +    
Sbjct: 1302 PDGSLLNTLVGHQNDVWSVAFTPDSKTIV-SASADTTVKLWSRSYTPEAKRVIEASDAAI 1360

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVM-QSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S S++PDS  I       G + L  M   N  DQ  +S   E     P      + ++ 
Sbjct: 1361 WSLSFTPDSQGIA----TAGNDSLVKMWDLNQDDQSALSWQLEG-LGQPR---DLNWVSV 1412

Query: 364  TKFS--------GEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
               +        G    I +   DG     L      + A  ++P  ++++ S   D   
Sbjct: 1413 NSQTDQPLVATGGADNTIKLWTTDGEAIATLTGHTEPVNAIAFNP-SKNILASASSD--- 1468

Query: 415  GSKLYSIDLNGRNETLINTPAYASDP 440
               +   D +G+    +  PA+ +D 
Sbjct: 1469 -KNVIIWDYDGQLIETLRIPAFPNDG 1493



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 87/257 (33%), Gaps = 22/257 (8%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            V   DG  ++ L            FS + Q +   T D++  + V+    +  +    + 
Sbjct: 1077 VWGIDGLWLQNLPHQNSVTSI--SFSEDSQFLGTTTADNQVTIWVWDEQQQQFQYLHNLV 1134

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               +++   +FS  G     +   D  + ++  D        L       +   ++ D  
Sbjct: 1135 GHEALVTRVKFSPQGDLIA-TSSNDNTIRLWRPD--GTIIRVLEGHTDRVLDVEFNSDGQ 1191

Query: 315  QIVFESD----REGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSG 368
            ++         R    Q  ++ +     + +S D     +  D  ++P+ D I  +  S 
Sbjct: 1192 KLASAGKDKTVRLWNRQGDLLATLSGHCEGVSSDSFDYCNIHDVSFNPKNDNILVSGSSD 1251

Query: 369  EKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                I     +  +E   ++  N +  T  +SP G  +    + D     K++    +G 
Sbjct: 1252 RTLKIW--DLEQQREIRTLKGHNEEVLTVLFSPDGEVIASGSRDD---TVKIWGFP-DGS 1305

Query: 427  NETLINTPAYASDPQWV 443
               L+NT     +  W 
Sbjct: 1306 ---LLNTLVGHQNDVWS 1319



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 75/217 (34%), Gaps = 30/217 (13%)

Query: 186  SGIIKNSLCVMDRDGA---NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            S     ++ + D DG     +R      D I+ + +F+ +   +A     +E  +R    
Sbjct: 1464 SASSDKNVIIWDYDGQLIETLRIPAFPNDGIVSDIKFNGDGTILA-VAIGNEMAIRATDE 1522

Query: 243  DTRIDRAPKRIGNFRSMILAP--------RFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               +    K+  ++ S    P         FS    +  I+    + + ++S +      
Sbjct: 1523 LYGVVLWRKQGDSWISYPSIPENESVNSIAFSPELGKLAIAS--GKNVKLWSRNGTPRPD 1580

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLY--------VMQSNG-----SDQKRI 341
                  L    S S+SPD   +   SD + K +L+        +  ++G     S  + I
Sbjct: 1581 SCPMTALATVRSLSFSPDGQILATASD-DKKVRLWAVKRDRDKLWPADGCHGTESAIEPI 1639

Query: 342  SQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            +  +         +SP G  +A  K  G    +  M 
Sbjct: 1640 TTINHNVFVNRIAFSPDGQTLAIAKDDGTLI-LWSMD 1675


>gi|198450475|ref|XP_001357994.2| GA17766 [Drosophila pseudoobscura pseudoobscura]
 gi|198131053|gb|EAL27130.2| GA17766 [Drosophila pseudoobscura pseudoobscura]
          Length = 440

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 69/190 (36%), Gaps = 19/190 (10%)

Query: 239 VYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           V + D R D   K   + +     +++   SS+G+    S   D  M ++  D ++   +
Sbjct: 173 VKVWDIREDNTLKLRHSLKGHALGVVSVAVSSDGQTIA-SSSLDSTMCLW--DARTGDKK 229

Query: 296 RL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPV 353
            L T       +  +SP   + V     +GK  + +        +++   +   Y     
Sbjct: 230 HLLTFGPVDLWTVGFSP-CDKYVISGLNDGK--ISMYSVETGKAEQVLDAQNGKYTLSIA 286

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKD 411
           +SP G  IA     G    I +      +    +E   +   +  +SP+ + L+      
Sbjct: 287 YSPDGKYIASGAIDG---IITIFDVAAGKVAQTLEGHAMPVRSLCFSPNSQMLLTGSD-- 341

Query: 412 GDTGSKLYSI 421
            D   KLY +
Sbjct: 342 -DGHMKLYDV 350



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 13/168 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   + L     +      +SP+ + +A    D      + + D    +  + +      
Sbjct: 268 GKAEQVLDAQNGKYTLSIAYSPDGKYIASGAIDG----IITIFDVAAGKVAQTLEGHAMP 323

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + +  FS N  + L++   D  M +Y V   S+    L+      +  S+S D  +    
Sbjct: 324 VRSLCFSPN-SQMLLTGSDDGHMKLYDV-AHSDVVGTLSGHASWVLCVSFSEDGKRFA-S 380

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTK 365
           S  +   +++    + S++K +    E S   +   +SP  D +    
Sbjct: 381 SSSDRSVKIW----DSSERKCLHTFNEHSDQVWSVRYSPGNDKVISAS 424


>gi|308049929|ref|YP_003913495.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ferrimonas balearica DSM 9799]
 gi|307632119|gb|ADN76421.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ferrimonas balearica DSM 9799]
          Length = 678

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 39/122 (31%), Gaps = 24/122 (19%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM-KKDGSQERLLVEDSNLQAPT--WSPSG 401
                F    SP G  ++F         + +  K D ++  ++  D     P   WS   
Sbjct: 49  GNPDRFQGRISPDGQWMSFRAPDEGVMNLWLAPKGDINRANVITNDRGRGIPAHFWSLDS 108

Query: 402 RSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPA--------------------YASDP 440
           + +++ + +DGD    LY ++L  G    L   P                        DP
Sbjct: 109 QHILYIQDRDGDENWHLYGVELATGDVTNLTPYPGIQAQMVAQSQSQPGVVVVGMNDRDP 168

Query: 441 QW 442
            W
Sbjct: 169 SW 170



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 21/145 (14%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             SPD   + F +  EG   L++      +    I+ D+        WS     I + + 
Sbjct: 57  RISPDGQWMSFRAPDEGVMNLWLAPKGDINRANVITNDRGRGIPAHFWSLDSQHILYIQD 116

Query: 367 SGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG----------DT 414
                 + +  ++        L     +QA       + +  S+ + G           +
Sbjct: 117 RDGDENWHLYGVELATGDVTNLTPYPGIQA-------QMVAQSQSQPGVVVVGMNDRDPS 169

Query: 415 GSKLYSIDL-NGRNETLINTPAYAS 438
              LY +DL  G    L   P  AS
Sbjct: 170 WHDLYRVDLATGERTLLAQNPGMAS 194



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 56/145 (38%), Gaps = 10/145 (6%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--FSS 267
            +   F+ R SP+ Q +++    DE ++ ++L           I N R   + P   +S 
Sbjct: 49  GNPDRFQGRISPDGQWMSF-RAPDEGVMNLWLAPKGDINRANVITNDRGRGI-PAHFWSL 106

Query: 268 NGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDR 322
           + +  L    +D      +Y V+L +     LT    I       S S     +V  +DR
Sbjct: 107 DSQHILYIQDRDGDENWHLYGVELATGDVTNLTPYPGIQAQMVAQSQSQPGVVVVGMNDR 166

Query: 323 EGKEQ-LYVMQSNGSDQKRISQDKE 346
           +     LY +     ++  ++Q+  
Sbjct: 167 DPSWHDLYRVDLATGERTLLAQNPG 191


>gi|300727093|ref|ZP_07060512.1| dipeptidyl-peptidase IV [Prevotella bryantii B14]
 gi|299775637|gb|EFI72228.1| dipeptidyl-peptidase IV [Prevotella bryantii B14]
          Length = 733

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 22/148 (14%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA---- 362
           A  S D  QI   S + GK+   +   +     +   DK  ++   + SP G  +     
Sbjct: 52  AKISQDGRQIQRYSFKTGKQIAVLFDVS-----QAIGDKIDNFDGYIPSPDGKFLLIRTN 106

Query: 363 --FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +           + +    +   L  +   Q P WSP  + + +  +      + ++ 
Sbjct: 107 TNYIYRRSYTADFYIYEVSTKKLIKLSAEGREQIPVWSPDSKHIAYVYQ------NNIFV 160

Query: 421 IDLNGRNETLINTPAYASD-----PQWV 443
            DL   ++  +      +D     P WV
Sbjct: 161 SDLTSASKIQVTNDGKFNDIINGLPDWV 188



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 73/243 (30%), Gaps = 44/243 (18%)

Query: 220 SPNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           SP+ + +       Y              +        +       P +S + K      
Sbjct: 95  SPDGKFLLIRTNTNYIYRRSYTADFYIYEVSTKKLIKLSAEGREQIPVWSPDSKHIAYVY 154

Query: 277 QKDEAMDIYSVDLQSNATERLTNTL------------------FINISASYSPDSSQIVF 318
           Q +    I+  DL S +  ++TN                      N +  ++ D ++I +
Sbjct: 155 QNN----IFVSDLTSASKIQVTNDGKFNDIINGLPDWVNEEEFGYNKALVFNADGTRICW 210

Query: 319 ES-DREGKEQLYVMQSNGSDQK----RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
              D    +Q  +    GS  +    RI     +  +         + A++     K +I
Sbjct: 211 LKFDESQVKQYSLQMYKGSMPEIEEFRIYPGLYSYKYPKAGEDNSKVSAWSYDLKSKTSI 270

Query: 374 GV---MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNET 429
            +   M  DG   R+   +            + ++           +LY+++   G ++ 
Sbjct: 271 PLNVPMDADGYMPRIKATN----------DAKKIVIYTFNRHQDDLRLYAVNPFTGISKL 320

Query: 430 LIN 432
           LI 
Sbjct: 321 LIQ 323


>gi|256784624|ref|ZP_05523055.1| hypothetical protein SlivT_09048 [Streptomyces lividans TK24]
 gi|289768509|ref|ZP_06527887.1| WD-40 repeat protein [Streptomyces lividans TK24]
 gi|289698708|gb|EFD66137.1| WD-40 repeat protein [Streptomyces lividans TK24]
          Length = 913

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 62/193 (32%), Gaps = 20/193 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + +++A A         V L D    +        R    +   S +G    ++  
Sbjct: 349 AFSRDGKRLAAAYEAA-----VVLWDVASGKKINEFATDRRTTTSLALSPDGTTVAVA-- 401

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
               + I+     + +  R+     +      +SPD  ++ F++   G  +++V      
Sbjct: 402 -GGGLRIW----DAGSGRRIGEPPGVTGDRVVFSPDGRKLAFDALNNGGSEVHVRGVGAE 456

Query: 337 DQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLV-EDSNL 392
               +             ++P  D +A     G    + +   D    + R +      +
Sbjct: 457 GAGEVVIPYPHDVISGIAFTPDTDALAVGTEDGG---LRLWDPDSGAAEGRAMSGHQGAI 513

Query: 393 QAPTWSPSGRSLI 405
           +A  ++  G  + 
Sbjct: 514 RAIAFAAGGSRIA 526



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 73/227 (32%), Gaps = 35/227 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+   +   +        + L +   +     + +    +    F  +G++ ++   
Sbjct: 641 SYSPDGTSLLIVS-----PDALRLWEEGAEARTVTLDSSVGPVAGAAFMPHGRQIVVGSY 695

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI-----SASYSPDSSQIVFESDREGKEQLYVMQ 332
             + +     D  +      T    I+I       + S D  Q+ +  D  G     V  
Sbjct: 696 AGKLLFEDLDDEATG-----TPGASIDITCAARHLAVSQDGMQVAYACDDTGG----VAD 746

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL---VED 389
           +     +  + + E      V SP G  +      G  + +     +   E L+   V  
Sbjct: 747 AEAGRVR--TFEAEDRVSALVISPDGRTLILGTLDGTLWRL-----EHGAEALVGVGVHR 799

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             +++  + P GR    S  +DG        +  +G  E     PA+
Sbjct: 800 GAVRSVAYGPDGRWFA-SAGEDGS-----VVVHPHGAREISARIPAH 840



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 99/306 (32%), Gaps = 34/306 (11%)

Query: 124 LRVEFRLWDVKDRKQI------------IGKKFFSSPASWRKIAHTISDD-IYQSITGEK 170
                 LWDV   K+I            +      +  +       I D    + I    
Sbjct: 361 YEAAVVLWDVASGKKINEFATDRRTTTSLALSPDGTTVAVAGGGLRIWDAGSGRRIGEPP 420

Query: 171 GDFNSRILFVSESVV-------SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           G    R++F  +          +G  +  +  +  +GA    +    D ++    F+P+ 
Sbjct: 421 GVTGDRVVFSPDGRKLAFDALNNGGSEVHVRGVGAEGAGEVVIPYPHD-VISGIAFTPDT 479

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             +A      ED               + +   +  I A  F++ G R   +   D  + 
Sbjct: 480 DALA---VGTEDGGLRLWDPDSGAAEGRAMSGHQGAIRAIAFAAGGSRIA-TAGADRTIR 535

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            ++ +  S     LT         ++S   S++V      G++        G+   R   
Sbjct: 536 QWNAETGSPIGFPLTGHAGPVDFIAFSRGGSELV----SLGEDATLRRWDAGNALLRTGP 591

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGR 402
           D  ++      +P+G  +A     G +  + V  ++   Q   L     + + ++SP G 
Sbjct: 592 DDASAPDALAVAPRGAKVAV----GGREGVRVFDQETGVQVAALDLPQGVLSLSYSPDGT 647

Query: 403 SLIFSR 408
           SL+   
Sbjct: 648 SLLIVS 653



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 13/132 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++S D  ++    +      + +       +         +      SP G  +A     
Sbjct: 349 AFSRDGKRLAAAYEAA----VVLWDVASGKKINEFATDRRTTTSLALSPDGTTVAVA--- 401

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G    I     D    R + E   +      +SP GR L F    +G +   +  +   G
Sbjct: 402 GGGLRIW----DAGSGRRIGEPPGVTGDRVVFSPDGRKLAFDALNNGGSEVHVRGVGAEG 457

Query: 426 RNETLINTPAYA 437
             E +I  P   
Sbjct: 458 AGEVVIPYPHDV 469



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 65/212 (30%), Gaps = 23/212 (10%)

Query: 200 GANIRYLT-PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           GA  R +T  S    +    F P+ +++   +Y  + +     +D      P    +   
Sbjct: 663 GAEARTVTLDSSVGPVAGAAFMPHGRQIVVGSYAGKLLFE--DLDDEATGTPGASIDITC 720

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIV 317
                  S +G +   +            D ++      T      +SA   SPD   ++
Sbjct: 721 AARHLAVSQDGMQVAYACDDTGG----VADAEAGRVR--TFEAEDRVSALVISPDGRTLI 774

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                 G     + +     +  +       +     + P G   A     G      V+
Sbjct: 775 L-----GTLDGTLWRLEHGAEALVGVGVHRGAVRSVAYGPDGRWFASAGEDGSV----VV 825

Query: 377 KKDGSQE---RLLVEDSNLQAPTWSPSGRSLI 405
              G++E   R+      ++A  +S  G  LI
Sbjct: 826 HPHGAREISARIPAHTGPVEAVAFSRDGSRLI 857


>gi|254585723|ref|XP_002498429.1| ZYRO0G10054p [Zygosaccharomyces rouxii]
 gi|238941323|emb|CAR29496.1| ZYRO0G10054p [Zygosaccharomyces rouxii]
          Length = 842

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 80/263 (30%), Gaps = 36/263 (13%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           F   S      K  +  +D      R  T   D  +    +S     VA      ++   
Sbjct: 6   FPWLSHREERRKYEVYTVDVSADGKRIATGGLDGKIRI--WS-----VASIQEAAKEESA 58

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---- 294
              +D  + R    +      +   +FS +GK    S   D  + I++ D +        
Sbjct: 59  KRTVDEELKRPLASMSRHTGSVTCVKFSPDGKYLA-SGSDDRILLIWAKDEEPRTEPIFG 117

Query: 295 -----------ERLTNTLFINISASYSPDSSQIVFES-DRE-----GK--EQLYVMQSNG 335
                       RL           ++PDSS +V    DR      G   E++     + 
Sbjct: 118 NEFEKEHWMVRRRLVAHDNDIQDICWAPDSSILVTVGLDRSIIIWSGSTFEKIKRFDVHQ 177

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQ 393
           S  K +  D    YF    S    L  F         F I  +  D  +   L      +
Sbjct: 178 SLVKGVVFDPANKYFATA-SDDRTLKVFRYHKAGDLAFTIEHVVSDAFKGSPLTT--YFR 234

Query: 394 APTWSPSGRSLIFSRKKDGDTGS 416
            P+WSP G+ +      +G   S
Sbjct: 235 RPSWSPDGQHIAVPNATNGPVSS 257


>gi|297203964|ref|ZP_06921361.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197713160|gb|EDY57194.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 350

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 62/185 (33%), Gaps = 16/185 (8%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
              F++R   +    +          +  DG + R    + D   +   F+ +       
Sbjct: 172 SAFFSTRTSVLDTRTMKLTPSLEDFSILLDGRSYR----ASDVNFWGVTFASDDDTFYAT 227

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---SVQKDEAMDIYS 286
                    V     R   + +++      +  P  S +G R       + +      Y 
Sbjct: 228 LNTANKTYLV-----RGSLSDRKVTTLVENVECPSLSPDGTRVAFKKRVLSRTALWHEYV 282

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---EQLYVMQSNGSDQKRISQ 343
           +DL++     L     ++  A++  D+  + +    +GK     L+ + ++G+ + R+  
Sbjct: 283 LDLRTRKETALAERHSVDDQATWL-DNETVAYALPADGKVGTSDLWSVPADGTGKPRLLI 341

Query: 344 DKEAS 348
              +S
Sbjct: 342 PGASS 346



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 65/204 (31%), Gaps = 32/204 (15%)

Query: 264 RFSSNGKRALISVQKDE--------AMDIYSVDLQSNATER-------LTNTLFINIS-- 306
           R S +G+    +V            +     +D ++            L +      S  
Sbjct: 151 RVSPSGRFVAWTVFVSGESYSSAFFSTRTSVLDTRTMKLTPSLEDFSILLDGRSYRASDV 210

Query: 307 ----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                +++ D        +   K  L     +      + ++ E     P  SP G  +A
Sbjct: 211 NFWGVTFASDDDTFYATLNTANKTYLVRGSLSDRKVTTLVENVE----CPSLSPDGTRVA 266

Query: 363 FTKF---SGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTG-SK 417
           F K        +   V+     +E  L E  +     TW     ++ ++   DG  G S 
Sbjct: 267 FKKRVLSRTALWHEYVLDLRTRKETALAERHSVDDQATWL-DNETVAYALPADGKVGTSD 325

Query: 418 LYSIDLNGRNETLINTPAYASDPQ 441
           L+S+  +G  +  +  P  AS P 
Sbjct: 326 LWSVPADGTGKPRLLIPG-ASSPA 348



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 56/167 (33%), Gaps = 26/167 (15%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSS---QIVFESDREGKEQLYVMQSNGSDQK---- 339
            DL++  T  L  T      A  SP        VF S        +  +++  D +    
Sbjct: 133 ADLRTRHTYALAGTPS---RARVSPSGRFVAWTVFVSGESYSSAFFSTRTSVLDTRTMKL 189

Query: 340 -------------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                        R  +  + +++   ++   D   F           +++   S  ++ 
Sbjct: 190 TPSLEDFSILLDGRSYRASDVNFWGVTFASDDD--TFYATLNTANKTYLVRGSLSDRKVT 247

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL-YSIDLNGRNETLIN 432
               N++ P+ SP G  + F ++    T     Y +DL  R ET + 
Sbjct: 248 TLVENVECPSLSPDGTRVAFKKRVLSRTALWHEYVLDLRTRKETALA 294


>gi|326911648|ref|XP_003202169.1| PREDICTED: POC1 centriolar protein homolog B-like [Meleagris
           gallopavo]
          Length = 451

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 80/211 (37%), Gaps = 18/211 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y        +    FSP  Q +A A+ D      V L    I      +    + + +  
Sbjct: 37  YKFVGHTDAVTSVNFSPEGQLLASASQDR----TVRLWIPCIHGESSVLKGHTASVRSVS 92

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFES 320
           FS +G   L+S   D+++ I+SV        RL  +LF +      A +SPD   I   S
Sbjct: 93  FSHDG-HLLVSASNDKSVKIWSV-----QRRRLLFSLFQHTHWVRCAKFSPDGRLIASCS 146

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           + +   +++   +       I      ++ D  ++P G  IA +  S     +  ++ + 
Sbjct: 147 E-DKSVKIWDTVNKTCIDSFIDYGGFPNFAD--FNPTGTCIA-SAGSNHTVKLWDIRMNK 202

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             +   V  + +   ++ PSG  LI +    
Sbjct: 203 LLQHYKVHRAEVNCVSFHPSGNYLITASTDG 233


>gi|324519083|gb|ADY47281.1| WD repeat-containing protein 5 [Ascaris suum]
          Length = 375

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 101/262 (38%), Gaps = 20/262 (7%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           SPA  RK     +++ + +   ++G+ +S+   V+       + N+L         +++ 
Sbjct: 27  SPAELRK-----AENAHHAAAAQQGEGSSQKSSVTSHGQGTTVVNNLPSSSAPNYEVKFT 81

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +   +FS +   +A A+ D      + + +T   +  K I   +  I    +S
Sbjct: 82  LIGHTKAISSVKFSADGTLLASASADK----TIKIWNTDDGKIEKTISGHKLGISDICWS 137

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           S+  R + S   D+ + I+ V   S   + L          +++P SS +V  S     E
Sbjct: 138 SD-HRLITSCSDDKTLKIWDV-TSSKCLKTLKGHTNYVFCCNFNPQSSLVVSGSF---DE 192

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERL 385
            + V         +             ++  G LI  + + G    + +      Q  + 
Sbjct: 193 SVRVWDVKSGACIKTLPAHSDPVSAVSFNRDGTLICSSSYDG---LVRIWDTANGQCVKT 249

Query: 386 LVEDSN--LQAPTWSPSGRSLI 405
           LV+D N  +    +SP+G+ ++
Sbjct: 250 LVDDDNPPVSFVKFSPNGKYIL 271



 Score = 40.0 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 70/199 (35%), Gaps = 12/199 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VVSG    S+ V D          P+    +    F+ +   +  ++YD      V + D
Sbjct: 185 VVSGSFDESVRVWDVKSGACIKTLPAHSDPVSAVSFNRDGTLICSSSYDG----LVRIWD 240

Query: 244 TRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           T   +  K  + +    +   +FS NGK  L +   D  + ++  + +    +  T    
Sbjct: 241 TANGQCVKTLVDDDNPPVSFVKFSPNGKYIL-AATLDSTLKLWDFN-KGKCLKTYTGHKN 298

Query: 303 --INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               I A++S    + +     +   ++++      +  +  +            P  ++
Sbjct: 299 EKYCIFANFSVTGGKWIVSGSED--NRVFIWNLQTKEVVQTLEGHTDVVLCTDCHPTQNI 356

Query: 361 IAFTKFSGEKFAIGVMKKD 379
           IA      ++  I + K D
Sbjct: 357 IASAALENDR-TIRLWKSD 374


>gi|323451731|gb|EGB07607.1| hypothetical protein AURANDRAFT_27325 [Aureococcus anophagefferens]
          Length = 461

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/263 (14%), Positives = 80/263 (30%), Gaps = 34/263 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y        +    FSP+   +A A+ D      V L +T+       +      +    
Sbjct: 90  YRFVGHRGAVNRVTFSPDGTGLASASSDR----TVRLWETKARGESTELKGHGGPVRCVD 145

Query: 265 FSSNGKRALISVQKDEAMDIYSVD-----------------------LQSNATERLTNTL 301
           ++ + +R L +   D+ + I+++                        L+  A    T+  
Sbjct: 146 YAPDARRLL-TASDDKTVKIWALPQRKFLCTLGAGELGSPGAAKSPRLRGGAGSATTSHS 204

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +A ++PD       SD    + + +    G    R   + E +  D  +S  G  +
Sbjct: 205 NWVRAAKWAPDGRLCASASD---DKLVKLWDVEGRSCVRTFFEHEGAVRDVAFSGDGTCV 261

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +     K  +   +  G  +        + +    P  R+  +      D   KLY +
Sbjct: 262 V-SGGDDGKVNVWDARSHGLIQHYASHAGPITSIAMEP--RAGHYLASSGDDGTLKLYDL 318

Query: 422 DLNGRNETLINTPAYASDPQWVG 444
                  TL      A+   +  
Sbjct: 319 RQGQVLYTLRGHEGAATAAAFSP 341



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 85/249 (34%), Gaps = 37/249 (14%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFR 257
           +R L   R   +    FSP+++++A    D            ++  TR  RA + +G  R
Sbjct: 38  VRTLRGHRGGAVNSVSFSPSKKQLASGGADSCVMLWHFGPASHVPGTRPTRAYRFVG-HR 96

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             +    FS +G     S   D  + ++    +   +  L           Y+PD+ +++
Sbjct: 97  GAVNRVTFSPDGTGLA-SASSDRTVRLWETKAR-GESTELKGHGGPVRCVDYAPDARRLL 154

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGV 375
             SD +   +++ +      +K +          P    SP+                  
Sbjct: 155 TASD-DKTVKIWALP----QRKFLCTLGAGELGSPGAAKSPR------------------ 191

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
             + G+        + ++A  W+P GR  + +   D D   KL+ ++      T      
Sbjct: 192 -LRGGAGSATTSHSNWVRAAKWAPDGR--LCASASD-DKLVKLWDVEGRSCVRTFFEHEG 247

Query: 436 YASDPQWVG 444
              D  + G
Sbjct: 248 AVRDVAFSG 256



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 50/169 (29%), Gaps = 9/169 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S      + + D +G +        +  + +  FS +   V        D  +V + D R
Sbjct: 221 SASDDKLVKLWDVEGRSCVRTFFEHEGAVRDVAFSGDGTCVV----SGGDDGKVNVWDAR 276

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +   +    I +          L S   D  + +Y +  Q      L        
Sbjct: 277 SHGLIQHYASHAGPITSIAMEPRAGHYLASSGDDGTLKLYDL-RQGQVLYTLRGHEGAAT 335

Query: 306 SASYSP---DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           +A++SP   D          +    ++  + +G   +  S  K  +   
Sbjct: 336 AAAFSPRSTDGELFA-SGGADKVVMVWRTKLDGCAPQPPSTTKPRAARA 383


>gi|295111236|emb|CBL27986.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Synergistetes
           bacterium SGP1]
          Length = 658

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 77/220 (35%), Gaps = 51/220 (23%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDS 313
           I +PR S NG +A  +V + +         ++  DL S  T +LT +     +  +S D 
Sbjct: 20  ISSPRISPNGAKAAFAVHQGDLEGNRYLSCLWLCDLTSAQTSQLTFS-GTERAFCWSQDG 78

Query: 314 SQIVFESDREGKE-------------QLYVMQSNGSDQK----------RISQDKEASYF 350
             ++F S R  +              +LY M   G + +           +    +    
Sbjct: 79  RDLIFVSGRSPQPGEPEPAPDAPRDSRLYRMNVAGGEARFLAALPRTVTALWDLGDGRLL 138

Query: 351 DPVWSP-------QGDLIAFT----KFSGEKF------AIGVMKKDGSQERLLV-EDSNL 392
                P         D + F       +G+ F       + ++  +GS+   L  E  ++
Sbjct: 139 LKTTDPRKGERFEDADYMVFQQIPFNSNGKGFTAQQRSRLSLLTLEGSKLEDLTPETMDV 198

Query: 393 QAPTWSPSGRSLIFSRKKDGD---TGSKLYSIDLNGRNET 429
           +    SP G  ++ +     D     + ++ IDL+ +   
Sbjct: 199 RQVRPSPDGTRVLLTGVDYEDVMPLTTGVWEIDLSSKTLK 238



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 34/105 (32%), Gaps = 17/105 (16%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           K      P  SP G   AF    G+         + +     +Q   L      +A  WS
Sbjct: 16  KYRFISSPRISPNGAKAAFAVHQGDLEGNRYLSCLWLCDLTSAQTSQLTFSGTERAFCWS 75

Query: 399 PSGRSLIFSRKKDGDTG-----------SKLYSIDLNGRNETLIN 432
             GR LIF   +    G           S+LY +++ G     + 
Sbjct: 76  QDGRDLIFVSGRSPQPGEPEPAPDAPRDSRLYRMNVAGGEARFLA 120



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 64/214 (29%), Gaps = 49/214 (22%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVY---LMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           + +  PR SPN  K A+A +  +     Y   L    +  A      F     A  +S +
Sbjct: 18  RFISSPRISPNGAKAAFAVHQGDLEGNRYLSCLWLCDLTSAQTSQLTFSGTERAFCWSQD 77

Query: 269 GKRALISVQKDEAM-------------DIYSVDLQSNATERL-----TNTLFIN------ 304
           G+  +    +                  +Y +++       L     T T   +      
Sbjct: 78  GRDLIFVSGRSPQPGEPEPAPDAPRDSRLYRMNVAGGEARFLAALPRTVTALWDLGDGRL 137

Query: 305 ----ISAS---YSPDSSQIVFE-----SDREG-----KEQLYVMQSNGSDQKRISQDKEA 347
                         D+  +VF+     S+ +G     + +L ++   GS  + ++ +   
Sbjct: 138 LLKTTDPRKGERFEDADYMVFQQIPFNSNGKGFTAQQRSRLSLLTLEGSKLEDLTPET-M 196

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                  SP G  +  T    E     VM     
Sbjct: 197 DVRQVRPSPDGTRVLLTGVDYED----VMPLTTG 226



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 50/308 (16%), Positives = 101/308 (32%), Gaps = 57/308 (18%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           LWD+ D + ++            +      D  Y         FNS     +    +   
Sbjct: 129 LWDLGDGRLLLKTT-------DPRKGERFEDADYMVFQQIP--FNS-----NGKGFTAQQ 174

Query: 190 KNSLCVMDRDGANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILR----VYLMDT 244
           ++ L ++  +G+ +  LTP   D     P  SP+  +V     D ED++     V+ +D 
Sbjct: 175 RSRLSLLTLEGSKLEDLTPETMDVRQVRP--SPDGTRVLLTGVDYEDVMPLTTGVWEIDL 232

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDE--AMDIYSVDLQSNATERLTNT 300
                 +R+   +       F   G+  L    +++        + +  +  A   LT  
Sbjct: 233 SSKTLKERLPQGQYAWGCAAF-FEGEVLLAGTDMKRHGLNENKRFFMAREGAAPRCLTPD 291

Query: 301 LF------------INISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                           I     S+  D  +  F S    + +L  + + G+  +     +
Sbjct: 292 WDRSLHNSIICDCRYGIGPIGESFLVDGDKAWFISTEGWRSRLSTVDAQGAVVQVTRMLR 351

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL------VEDSNLQAPTW-- 397
               FD      G  +           + +++ DG++ RL       +E ++L  P +  
Sbjct: 352 SVDDFDVK---DGRAVVVGLEGLSLQELYLIE-DGAERRLTGLNTAALEGTDLSVPEYVR 407

Query: 398 ----SPSG 401
               +P G
Sbjct: 408 LENGTPDG 415


>gi|170728484|ref|YP_001762510.1| peptidase S9 prolyl oligopeptidase [Shewanella woodyi ATCC 51908]
 gi|169813831|gb|ACA88415.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella woodyi ATCC 51908]
          Length = 827

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 77/184 (41%), Gaps = 14/184 (7%)

Query: 270 KRALISVQKDEAMDIY--SVDLQSNATE---RLTNTLFINISAS---YSPDSSQIVFESD 321
            +  I ++  +  D +  ++DL+  +     RL +  ++N + +   + P S  + + S+
Sbjct: 386 NKVAIMLEAIDNKDRWIATLDLKKGSLTTEHRLHDEAWVNYNFNQFGWLPKSDDLYYLSE 445

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKD 379
             G   +Y+ ++ G   + ++Q K     D    P+   I +   K       +  ++  
Sbjct: 446 ETGYSHIYLKRA-GEPVEPLTQGKYV-VSDITLGPKAQFIYYKANKRHPGIDNVYRVEVS 503

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA-S 438
             ++  L +       + SP G+SL+ +  +  +  S+LY   + G  + + +  + A  
Sbjct: 504 TGKDEQLTQWDGQLDYSLSPDGKSLLLNASRRTEP-SELYLQPIGGELKKMTSYTSDAFK 562

Query: 439 DPQW 442
           D  W
Sbjct: 563 DYAW 566


>gi|317126379|ref|YP_004100491.1| SARP family transcriptional regulator [Intrasporangium calvum DSM
            43043]
 gi|315590467|gb|ADU49764.1| transcriptional regulator, SARP family [Intrasporangium calvum DSM
            43043]
          Length = 1399

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 94/276 (34%), Gaps = 40/276 (14%)

Query: 174  NSRILFVSESVVSGIIKN-SLCV------MDRDGANIRYLTPSRDQILFEPRF---SPNQ 223
            + R L+ + + +S   +   L V      +D +G        + D +  +  +   SP++
Sbjct: 1023 DGRTLYPNAAGLSPDGRTLYLYVDDNFMALDLEGRRSFLPVVAGDPLDRDAAWASLSPDR 1082

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             +VAY         +V  + T        +G   +      +S +G R L S   D A+ 
Sbjct: 1083 TRVAYHWDGLPATNQVRDLTTGRLGPRVALGLNTTTFTEVVWSPDG-RLLSSTTGDSALG 1141

Query: 284  IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----------EGKEQLYVMQS 333
            ++          R + +    + A++SPD + ++    R          + + +L+V+  
Sbjct: 1142 LWEA-ATGREVARTSLSPEEAVVATFSPDGNTLL-VGTRVPPVSKEAPTQERGRLHVLSV 1199

Query: 334  NGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             G    R   +     +     SP G  +                 D S  +L       
Sbjct: 1200 PGLQPVRDPIEAGVGLFDMLTVSPNGRDVVAHGE-------WAQTIDYSTGQLGAAIGAK 1252

Query: 393  QAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              P     +SP G+ L F    DG     +  +D+ 
Sbjct: 1253 DDPPSAGEFSPDGQRL-FLSWLDGR----IALLDVT 1283



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/290 (18%), Positives = 94/290 (32%), Gaps = 36/290 (12%)

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS---RDQILFEPRFSPNQQKVAYAT 230
              R+L  S +V +  I   + ++  DG+           +DQ+  +  F    + +A   
Sbjct: 801  TGRLLAASVNVPTAAIPP-VALLQPDGSLAPGQLGGLSVKDQVRQDLSFDSTGRWLA-VG 858

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
               +      ++    +R  + +   + S  + P  S +G+       +D    I   DL
Sbjct: 859  VLPKAGPEGTVLVWDTERPQRPVARVKTSQSIFPVVSPDGRTL---YSRD-RTRILVTDL 914

Query: 290  QSNATER-LTNTLFINISAS----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
                  R LT         S     +PD+  +V      G     V+ +          D
Sbjct: 915  PEGTVRRVLTAADLGVQELSGRLLLTPDARTLV----VGGGPAAVVIDATTLASTSHLYD 970

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWS-PSGR 402
             +A       S  G  +      G+K  +      G++  ++  E+     P  S P GR
Sbjct: 971  GQAWSGQLALSADGTRV---SVLGDKVVVW--DLSGAEPVVVAKENVGDNRPVVSRPDGR 1025

Query: 403  SLIFSRKKDGDTGSKLY--------SIDLNGRNETLINTPAY--ASDPQW 442
            +L  +       G  LY        ++DL GR   L          D  W
Sbjct: 1026 TLYPNAAGLSPDGRTLYLYVDDNFMALDLEGRRSFLPVVAGDPLDRDAAW 1075


>gi|41054037|ref|NP_956187.1| WD repeat-containing protein 8 [Danio rerio]
 gi|29791584|gb|AAH50515.1| WD repeat domain 8 [Danio rerio]
          Length = 446

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 85/226 (37%), Gaps = 16/226 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D     I +L    DQ++    +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDIGTLQIVHLYTCLDQVMHM-EWSSDSLFIL-CAVYKRGLVQVWSLEQPDWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I      +++ R+S +G+  L + + +  + ++S  L + +   +           +
Sbjct: 86  --KIDEGSIGLVSSRWSPDGRHILNTTEFNLRITVWS--LCTKSVSYIKYPKACQKGMDF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + V   +     R  + +        WSP G ++A    +  
Sbjct: 142 TADGRYMALAERRDCKDYISVFVCDDWHLLRHFESETQDLAGLEWSPNGCVLA-VWDNCL 200

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRK 409
           ++ I +   DG   RLL   S  +      +  WSPS + L     
Sbjct: 201 EYKILLYSLDG---RLLSFYSAYEWSLGIKSVAWSPSSQFLAIGSY 243



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 9/159 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +GK     VQ      +   D+ +     L   L   +   +S DS  I+    + G
Sbjct: 16  VSPDGKYLATCVQ----YRLVVRDIGTLQIVHLYTCLDQVMHMEWSSDSLFILCAVYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++      K    +         WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQPDWHCK--IDEGSIGLVSSRWSPDGRHIL--NTTEFNLRITVWSLCTKSVS 127

Query: 385 LLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +      Q    ++  GR +  + ++D      ++  D
Sbjct: 128 YIKYPKACQKGMDFTADGRYMALAERRDCKDYISVFVCD 166


>gi|331014314|gb|EGH94370.1| hypothetical protein PLA106_00410 [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 377

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 66/179 (36%), Gaps = 23/179 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FSS+G+   +  +    +  + ++ ++ A ++++    I      +P  ++    +D +
Sbjct: 206 AFSSDGRFLYVVGEMSGTVTAFLINEKTGALKQVSQADGIPARLKLAPGQARDARNNDLK 265

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                 +  ++                    +P G  +  ++ +    ++  +       
Sbjct: 266 DDPTPRIWAAD-----------------IRLAPDGKWLFISERTTSSVSVFKVDPAKGNV 308

Query: 384 RLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             +    VE+   +    SP+GR L+ S +K    GS  Y+I  +G  + +   P+   
Sbjct: 309 TFVENYPVEEKQPRNIAISPNGRWLLVSGEKSDKVGS--YAIGASGALKRVSEAPSGKG 365


>gi|261880372|ref|ZP_06006799.1| xaa-Pro dipeptidyl-peptidase [Prevotella bergensis DSM 17361]
 gi|270332916|gb|EFA43702.1| xaa-Pro dipeptidyl-peptidase [Prevotella bergensis DSM 17361]
          Length = 724

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 79/278 (28%), Gaps = 68/278 (24%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV-------------AYATYDD 233
           G        + +DG   RY       IL    +SP+ +K+              Y     
Sbjct: 153 GKPYTEKRALTQDGTIGRY---YSSNIL----WSPDSKKIMVCKRNKVEKRYAYYVESTP 205

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPR----------------------FSSNGKR 271
           +D L+  L      +    +     +I+                         +  + K 
Sbjct: 206 KDQLQPILHKQEYAKPGDELPQRWPIIIDVASGSRVEVDASAIVNQYSLGWFQWLPDSKE 265

Query: 272 ALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSP-------DSSQIVFESDR 322
             +   K       + ++D ++     +      N   +YS           Q+++ S+R
Sbjct: 266 VTMEYNKRGHQLYQMLAMDAETGKLRTVAEEKS-NTFVNYSRIWRKTINKGKQLLWTSER 324

Query: 323 EGKEQLYVMQSN--------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---- 370
           +G   +Y+              + ++I++  +          +   + +   SG      
Sbjct: 325 DGWNHIYLYDLTPVIKKGKLDVNMRQITK-GDWFVRAVQHVDEKQGVIYFSASGVNKKED 383

Query: 371 ---FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                   +  DG     L  D      T+SP  R L+
Sbjct: 384 PYLVHFYRIDLDGKNMVCLTPDEGNHTVTYSPDYRYLV 421


>gi|239994608|ref|ZP_04715132.1| Dipeptidyl peptidase IV [Alteromonas macleodii ATCC 27126]
          Length = 737

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 79/223 (35%), Gaps = 40/223 (17%)

Query: 218 RFSPNQQKVAYATYDDEDI-----LRVYLMDTR-------------------------ID 247
            +SP++ K+A+   D+  +       +Y  D +                          D
Sbjct: 209 WWSPDETKIAFTKVDESPVDVITRSEIYADDIKLIEQKYPKAGTPNVLVELAIQDINSGD 268

Query: 248 RAPKRIGNFRSMILA-PRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERL---TNTL 301
           R    +G  + +  A  ++  N        Q  +   +++ + DL S     L   T+  
Sbjct: 269 RTWVDLGEDKDIYFARGKWMPNNTTFTYQWQTRDQQTLELRAFDLNSKKENVLLTETSDT 328

Query: 302 FINISAS--YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           ++N+     +  D  Q ++ S+R+G + LY+  ++G   K++++               +
Sbjct: 329 WVNLHNDLYFLKDKGQFIWASERDGFKHLYLFNNSGKLVKQLTKGDWVVDSVEAIDTANN 388

Query: 360 LIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            + F+       +  +  +  DG +   + E     +  +S  
Sbjct: 389 RLYFSGRKDTPLESHVYSVPLDGGEISRITELGAYHSAAFSKD 431



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 53/319 (16%), Positives = 93/319 (29%), Gaps = 89/319 (27%)

Query: 203 IRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDR----------- 248
           I  +  S       PR    SP+ Q+V +      D  R+ L +  I+            
Sbjct: 23  IERIFSSPSLDGNAPRSLKVSPDGQRVTFLKGKQTDYERLDLWEYHIESGQTRMLFDSND 82

Query: 249 --------------APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                           +R+    S I++ ++S +GK  L  +      D++   L     
Sbjct: 83  LQSGEEVLSDEEKARRERMRLSGSGIVSYQWSDDGKALLFPL----GGDVFYHKLGEKGA 138

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-------- 346
           ++L +T         SP  + I F  D    + LYV       +  I+++          
Sbjct: 139 KQLLDTDAFETDIKLSPKGNYISFIRD----QNLYVKHIESGKETAITKEGGDNIKFGMA 194

Query: 347 --------ASYFDPVWSPQGDLIAFTKFSGEK---------------------------- 370
                          WSP    IAFTK                                 
Sbjct: 195 EFVAQEEMGRMTGYWWSPDETKIAFTKVDESPVDVITRSEIYADDIKLIEQKYPKAGTPN 254

Query: 371 --FAIGVMKKDGSQERL--LVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               + +   +        L ED ++      W P+  +  +  +       +L + DLN
Sbjct: 255 VLVELAIQDINSGDRTWVDLGEDKDIYFARGKWMPNNTTFTYQWQTRDQQTLELRAFDLN 314

Query: 425 GRNETLINTPAYASDPQWV 443
            + E ++ T        WV
Sbjct: 315 SKKENVLLTETSD---TWV 330


>gi|213401611|ref|XP_002171578.1| transcriptional corepressor Tup11 [Schizosaccharomyces japonicus
           yFS275]
 gi|211999625|gb|EEB05285.1| transcriptional corepressor Tup11 [Schizosaccharomyces japonicus
           yFS275]
 gi|273068543|gb|ACZ97558.1| Tup11 protein [Schizosaccharomyces japonicus]
          Length = 630

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 60/181 (33%), Gaps = 27/181 (14%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-------- 307
            +S++   RFS++GK                 D+Q+   ++L      N +         
Sbjct: 332 HKSVVCCVRFSADGKYLA----TGCNRAAEIFDVQTG--QKLATFEQENTNPETDLYIRS 385

Query: 308 -SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SPD   +V  ++     Q+ +        K +    E   +   +S  G  I     
Sbjct: 386 VAFSPDGKYLVTGAE---DRQIRMWDIATGKVKHVFVGHEQDIYSLDYSRDGRYIV---S 439

Query: 367 SGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                   + + +  +  L +  ++ + A  +SP+ + +       G     +    + G
Sbjct: 440 GSGDHTARLWEAETGKCVLTLAIENGVTAVAFSPNNQFIA-----AGSLDQVIRVWSITG 494

Query: 426 R 426
            
Sbjct: 495 T 495



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 50/263 (19%), Positives = 86/263 (32%), Gaps = 49/263 (18%)

Query: 115 RVIKEGKDRLRV------EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            V      +  V      + R+WD+   K  +   F                DIY     
Sbjct: 385 SVAFSPDGKYLVTGAEDRQIRMWDIATGK--VKHVFVGHEQ-----------DIYSLDYS 431

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G            +VSG   ++  + + +           + +     FSPN Q +A 
Sbjct: 432 RDG----------RYIVSGSGDHTARLWEAETGKCVLTLAIENGVTAV-AFSPNNQFIAA 480

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D   ++RV+ +        K++   R  + +  FS++GK    S   D+ M ++ + 
Sbjct: 481 GSLD--QVIRVWSI---TGTLLKKLEGHRESVYSIAFSADGKYLA-SGSLDKTMRLWELK 534

Query: 289 LQSNATE--------RLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQK 339
           L  NA            T      +S + SP+    V  S DR     +        +  
Sbjct: 535 LDENAKTCSKASAISTYTGHSNFVLSVAISPNGKWAVSGSKDRS----VQFWNLKTDELY 590

Query: 340 RISQDKEASYFDPVWSPQGDLIA 362
              Q  + S     +SP G L A
Sbjct: 591 LTFQGHKNSVISVCFSPDGKLFA 613



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 29/87 (33%), Gaps = 5/87 (5%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A+           +     SPN +     + D      V   + + D         ++ +
Sbjct: 545 ASAISTYTGHSNFVLSVAISPNGKWAVSGSKDR----SVQFWNLKTDELYLTFQGHKNSV 600

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSV 287
           ++  FS +GK    +   D    I+S+
Sbjct: 601 ISVCFSPDGK-LFATGSGDLRARIWSI 626


>gi|228923106|ref|ZP_04086397.1| TolB domain protein [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228836485|gb|EEM81835.1| TolB domain protein [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 412

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 85/244 (34%), Gaps = 43/244 (17%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY     +  L +Y +     +
Sbjct: 35  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSYDGEWLAYVKGKKQSTLELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K++  F   +   ++S               +  + V+ ++   E ++  +      +
Sbjct: 86  DGKKVTPFHLEVSNYQWSPIENIIAFIFT--GTLHTFEVEKKNADFENVSAGVGDY---A 140

Query: 309 YSPDSSQIVFESDREGKEQLYV----------MQSNGSDQKRI-SQDKEASYF------D 351
           + PD    +  S+       +              N    K++ +   E   F       
Sbjct: 141 WYPDGKNFLISSEAHLLPTGWTGAQLYEVQKDAHMNPHKMKQLYALPNEHDDFLALVASG 200

Query: 352 PVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWSPSGR 402
             WSP    I+F       +S +   + +++ DGS+     ++L+     +   W+PS  
Sbjct: 201 FEWSPDRKWISFLAVPTASWSADSNTLCLVRADGSRFEKIDQMLLNTQWFK---WAPSSN 257

Query: 403 SLIF 406
            L +
Sbjct: 258 ILAY 261



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 10/87 (11%)

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  IAF +       + + K DG +E+ L +   +  P WS  G  L + + K   +  +
Sbjct: 28  GVKIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSYDGEWLAYVKGKK-QSTLE 80

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           LY +  +G+  T  +     S+ QW  
Sbjct: 81  LYRLK-DGKKVTPFHL--EVSNYQWSP 104


>gi|168703042|ref|ZP_02735319.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 929

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 74/227 (32%), Gaps = 21/227 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +     T        V L +        R+           FS +G R ++  +
Sbjct: 428 ALSPDGKHYLRHTGRAGAGTLV-LGNATTGVDLHRLDTAVGSEPEVSFSPDGTRFVLMTR 486

Query: 278 KDEAMDIYSVDLQSNAT-ERL------TNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
              A++++  D+   A  +RL      T+       A+++PD  +  F     G + +  
Sbjct: 487 YGAAVEVW--DVAKRALVKRLPAPPQPTDGERSGYGAAFTPDGRE--FWLKLPGNDLMRW 542

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             +   +  R +     S       P G  +      G    + V  +   +ER +    
Sbjct: 543 DAATFLELPRFAPGTSQSPLTIAPLPDGRTVLVPCDIG---RVLVFDRQTGRERPVPGRY 599

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAY 436
              A   SP  + +       GD   ++  ++   GR E ++     
Sbjct: 600 RDAAFALSPDDKFVAV-----GDASGRIDLLNAATGRLERVVRESGD 641


>gi|42779272|ref|NP_976519.1| prolyl oligopeptidase family protein, putative [Bacillus cereus
           ATCC 10987]
 gi|42735187|gb|AAS39127.1| prolyl oligopeptidase family protein, putative [Bacillus cereus
           ATCC 10987]
          Length = 652

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 111/312 (35%), Gaps = 55/312 (17%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           ++++   S        +  I ++S        KN + V   DG     +T   + I    
Sbjct: 63  LANENIDSTCPLWSPNSKDIAYLS---PVDNGKNQIFVKLLDGYGGVQITHEEEGISTF- 118

Query: 218 RFSPNQQKVAYATYDD-----EDILRVY--------------------LMDTRIDRAPKR 252
           ++ P  +   Y T        +    +Y                        + D+  + 
Sbjct: 119 KWDPTGKGFYYITQSKECEEIKKRKELYGGFQHVGKEHQNNCLCYIEIEKVIQNDKEERE 178

Query: 253 IGNFRSMILAPRF-------SSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTL 301
           I     +     F       S++GK+ +     S+      D+Y +D+++   +++    
Sbjct: 179 INGVYQLTDGKDFYIHDFDISNDGKKVVCMATPSLNDHMNGDLYILDVEAEELQKMNVDR 238

Query: 302 FINISASYSPDSSQIVF-ESDREGKE--------QLYVMQSNGSDQKRISQDKEASYFDP 352
            +  S  +SP+ S++ +  S RE +          L +   N  +  +   + +++    
Sbjct: 239 LLGGSVCFSPEGSKMCYAASIREKEYYRNHIQESTLEIYDMNTGEVIQPLTNFDSTVMPL 298

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKK 410
            W+ +G  I         + IG++ +DG+  + L +  D  +   + +  G  + +++  
Sbjct: 299 QWTAKG--ILIRWQDKTNYRIGLLAEDGT-VKALSDKIDGFIMDASITRDGNHITYNKAI 355

Query: 411 DGDTGSKLYSID 422
             +T  ++Y  D
Sbjct: 356 TNET-FEIYLDD 366



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 59/202 (29%), Gaps = 45/202 (22%)

Query: 266 SSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GK                   ++  +     +  L N    +    +SP+S  I + 
Sbjct: 26  SDDGKNVAFIKRIANWEDNTYRSHVWIYEKDKGQSYPLANENIDSTCPLWSPNSKDIAYL 85

Query: 320 SDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----------- 367
           S  + GK Q++V   +G    +I+ ++E       W P G    +   S           
Sbjct: 86  SPVDNGKNQIFVKLLDGYGGVQITHEEEGISTFK-WDPTGKGFYYITQSKECEEIKKRKE 144

Query: 368 --GEKFAIGVMKKDG--------------------SQERLLVEDSNL--QAPTWSPSGRS 403
             G    +G   ++                     +    L +  +        S  G+ 
Sbjct: 145 LYGGFQHVGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTDGKDFYIHDFDISNDGKK 204

Query: 404 LIFSRKK--DGDTGSKLYSIDL 423
           ++       +      LY +D+
Sbjct: 205 VVCMATPSLNDHMNGDLYILDV 226



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 8/92 (8%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPS 400
           +      S  G  +AF K          +  + + +KD G    L  E+ +   P WSP+
Sbjct: 19  TLSSTNISDDGKNVAFIKRIANWEDNTYRSHVWIYEKDKGQSYPLANENIDSTCPLWSPN 78

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            + + +    D     +++   L+G     I 
Sbjct: 79  SKDIAYLSPVDNGKN-QIFVKLLDGYGGVQIT 109


>gi|332250716|ref|XP_003274498.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat and SOCS box-containing
           protein 2-like [Nomascus leucogenys]
          Length = 421

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 75/199 (37%), Gaps = 21/199 (10%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           ++ + + +       +   + ++    F+ +G   L+S  +D+ + I+ ++      + L
Sbjct: 151 QIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVL 210

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +  L      S SPD S +       G++ +++         R  +  ++S     +SP 
Sbjct: 211 SGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPD 267

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-------------SNLQAPTWSPSGRSL 404
             L+    +      I      G + R L                S+L++  +SP G   
Sbjct: 268 SALLVTASYDTN--VIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEG--- 322

Query: 405 IFSRKKDGDTGSKLYSIDL 423
           ++      D   ++++++L
Sbjct: 323 LYLATVADDRLLRIWALEL 341



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 84/276 (30%), Gaps = 41/276 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           D  SR L  + +  +  ++  L + +                 +   FSP+    A++  
Sbjct: 4   DRESRFLRGTGTGEAVAVEEPLLLAELKPGRPHQFDWKSSCETWSVAFSPDGSWFAWSQX 63

Query: 232 D------------------DEDILRVYLMDTRIDRAPKRIGN-----FRSMILAPRFSSN 268
                               E   R    +T+   +PK            +  +P  S  
Sbjct: 64  HCIVKLIPWPLEEQFIPKGFEAKSRSSKNETKGRGSPKEKTLDCGQIVWGLAFSPWPSPP 123

Query: 269 GKRA---------------LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            ++                L +   D  + I+ V         L+    +    S++P  
Sbjct: 124 SRKLWARHHPQVPDISCLVLATGLNDGQIKIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSG 182

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           S I+  + R+   +++ +  +G   + +S       +    SP   ++         F +
Sbjct: 183 SLILVSASRDKTLRIWDLNKHGKQIQVLS-GHLQWVYCCSISPDCSMLCSAAGEKSVF-L 240

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             M+      +L    S++ +  +SP    L+ +  
Sbjct: 241 WSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASY 276


>gi|307596514|ref|YP_003902831.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Vulcanisaeta distributa DSM 14429]
 gi|307551715|gb|ADN51780.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Vulcanisaeta distributa DSM 14429]
          Length = 639

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/236 (14%), Positives = 88/236 (37%), Gaps = 27/236 (11%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----KDEA 281
           + +         + +L    +  + ++I +    ++A     +G+R  I+V     K   
Sbjct: 142 LWFNGRGFIHTFKSHLFSLDLGGSIRQITSGDFDVVAYDVEPSGRRVAIAVSTNKFKPYR 201

Query: 282 MDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGK-----EQLYVMQSNG 335
            +++ V+L+S   ER +     ++SA  +SPD   +    +   +     + + +++S G
Sbjct: 202 NEVWVVNLESG--ERYSVLSNYSVSAIKWSPDGKYLALVGNDLHRGFATHDHVMLVRSEG 259

Query: 336 SDQKRISQDKEASYFDPVWSPQ------------GDLIAFTKFSGEKFAIGVMKKDGSQE 383
            +   + +  + +  + + S              GD + F    G    +     +G  +
Sbjct: 260 GEVIDLMRSVDRNVGNSLNSDVRGSPPPIRLQWVGDWVYFIMMDGGASKLVRASVNGGVD 319

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            ++  + +++       G  + F         ++LY    NG  E + N   + + 
Sbjct: 320 VVISGERSIEDFAVMKDGT-IYFISMDPLRP-TELYR-WFNGSEERITNFNDWVNS 372



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 72/210 (34%), Gaps = 38/210 (18%)

Query: 269 GKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           G     +V K      D   +++  D       ++T     + S         +VF + R
Sbjct: 25  GGLLAFTVSKIADSLEDYERNVWVYD--GKTLRQVTRGN-NDFSPRIL-SGKGLVFLTRR 80

Query: 323 E-GKE----QLYVMQSNGSDQKRISQDKEAS----------YFDPVWSPQGDLIAFTK-- 365
             GK+    +++ +  +G +  +++                YF     P  + + F +  
Sbjct: 81  GFGKDKPGVEVWYLPFDGGEAMKVAYIGGGVNDLRIINGVMYFMSNVGPVQEDVKFVEDW 140

Query: 366 ---FSGEKF------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDT 414
              F+G  F       +  +   GS  ++   D ++ A    PSGR   +  S  K    
Sbjct: 141 PLWFNGRGFIHTFKSHLFSLDLGGSIRQITSGDFDVVAYDVEPSGRRVAIAVSTNKFKPY 200

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            ++++ ++L       + +    S  +W  
Sbjct: 201 RNEVWVVNLESGERYSVLSNYSVSAIKWSP 230


>gi|298250380|ref|ZP_06974184.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297548384|gb|EFH82251.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 616

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 3/86 (3%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSR 408
            P  SP G  +A+         + V   +G   + + +D    ++   W+   + + + +
Sbjct: 23  SPQVSPDGKRLAYLAPVNNVLNVWVGSLEGDDYQPVTKDKERGIRFYFWAADNKHIGYIQ 82

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTP 434
              GD   +LY  ++  R ET   TP
Sbjct: 83  DAGGDENWRLYMTNVETR-ETRDLTP 107



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 42/103 (40%), Gaps = 2/103 (1%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             ++     +  S   SPD  ++ + +       ++V    G D + +++DKE       
Sbjct: 11  PRKVLFGNPVKASPQVSPDGKRLAYLAPVNNVLNVWVGSLEGDDYQPVTKDKERGIRFYF 70

Query: 354 WSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQA 394
           W+     I + + +G    + + +   +  + R L   +N+QA
Sbjct: 71  WAADNKHIGYIQDAGGDENWRLYMTNVETRETRDLTPFANVQA 113



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 59/156 (37%), Gaps = 11/156 (7%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-S 308
           P+++     +  +P+ S +GKR       +  ++++   L+ +  + +T      I    
Sbjct: 11  PRKVLFGNPVKASPQVSPDGKRLAYLAPVNNVLNVWVGSLEGDDYQPVTKDKERGIRFYF 70

Query: 309 YSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-----LI 361
           ++ D+  I +  D  G    +LY+      + + ++    A+    V           L+
Sbjct: 71  WAADNKHIGYIQDAGGDENWRLYMTNVETRETRDLTP--FANVQARVTGHDKHFPHELLV 128

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              K   +   +  +     + +L+ ++    A +W
Sbjct: 129 ELNKEKPQVHDVYHLDLPSGELKLVAKNPGNIA-SW 163



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 80/227 (35%), Gaps = 17/227 (7%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            + +   P+ SP+ +++AY      ++L V++     D       +    I    ++++ 
Sbjct: 17  GNPVKASPQVSPDGKRLAYLA-PVNNVLNVWVGSLEGDDYQPVTKDKERGIRFYFWAADN 75

Query: 270 KRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI---VFESDREG 324
           K               +Y  ++++  T  LT   F N+ A  +         +     + 
Sbjct: 76  KHIGYIQDAGGDENWRLYMTNVETRETRDLT--PFANVQARVTGHDKHFPHELLVELNKE 133

Query: 325 KEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           K Q   +Y +     + K ++++        + +      A          + V + + S
Sbjct: 134 KPQVHDVYHLDLPSGELKLVAKNPGNIASWVIDTQFKVRGAVVTLPDGGSELLVREHEES 193

Query: 382 QERLLV----EDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           + R LV    ED+    P  ++  G +L +         S+L  + L
Sbjct: 194 EWRKLVSWTSEDALTSGPVGFTLDGNAL-YLEDSRNANASRLVKLSL 239


>gi|256838645|ref|ZP_05544155.1| dipeptidyl peptidase IV [Parabacteroides sp. D13]
 gi|256739564|gb|EEU52888.1| dipeptidyl peptidase IV [Parabacteroides sp. D13]
          Length = 733

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 101/322 (31%), Gaps = 82/322 (25%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDEDIL 237
           N++ ++  DG N      ++D I+                 +SP    +A+   D+  + 
Sbjct: 160 NNVHILSPDGRNTIVTRETQDGIVCGQAVHQREFGITKGMFWSPKGSALAFYRMDERMVT 219

Query: 238 RVYLMDTRI--------------------DRAPKRIGNFRSMILA---P--------RFS 266
              L++                            ++   +++ L    P         +S
Sbjct: 220 AYPLVNIDTRCATPVPHKYPMAGMKSHEVTVGVYQVATGQTVWLETGLPKEKYLTNIAWS 279

Query: 267 SNGKRALISVQKDEAMDIYSVD---LQSNATERL-TNTLFINISAS----YSP-DSSQIV 317
            + K   I+    E  +++ V    L       L T T    +       + P D  + +
Sbjct: 280 PDEKSIYIAELNREQNEMHLVRYSALTGKKEADLFTETDRCYVEPQHPVLFLPNDPDKFI 339

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---------KFSG 368
           ++S+ +G   LY+  + G + ++++  +        +S  G+ + F             G
Sbjct: 340 WQSEADGYNHLYLYDTTGKELRKLTGGEWVVTKVLGFSKDGNKVIFEGTAPHPVSPNMQG 399

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTW---------SPSGRS-LIFSRKKDGDTGSKL 418
                 + + D      L     +   +W         SPSG   + +           L
Sbjct: 400 TGMQRYIWETD------LRTGDIMNCLSWKVGVHRWLLSPSGEYAIDYVSSPSTPRDIDL 453

Query: 419 YSIDLNGRNETLINTPAYASDP 440
             +    ++  +I+T   A DP
Sbjct: 454 IRV----KDAKVISTLLSAPDP 471


>gi|212691466|ref|ZP_03299594.1| hypothetical protein BACDOR_00958 [Bacteroides dorei DSM 17855]
 gi|212665946|gb|EEB26518.1| hypothetical protein BACDOR_00958 [Bacteroides dorei DSM 17855]
          Length = 743

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 63/212 (29%), Gaps = 65/212 (30%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDR-----EGKEQLYVMQSNG 335
                ++ Q+     + N +       +S D+S++ ++ + R     + +   +V+    
Sbjct: 82  PANMLLNPQTGKPISVRNFI-------FSEDNSKVLIYTNTRRVWRYDTRGDYWVLNLKN 134

Query: 336 SDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
              +++     EA+     +SP    +A+   +     I V      +   L +D N + 
Sbjct: 135 GKLQQLGKSLPEATLMFAKFSPDASRVAYVSRN----NIYVESLVDGKINQLTQDGNNEI 190

Query: 394 -----------------APTWSPSGRSLIFS-RKKDGDTGSKLYS--------------- 420
                               WSP G+ + +      G     + +               
Sbjct: 191 VNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYP 250

Query: 421 -------------IDLNGRNETLINTPAYASD 439
                        +  +G N T +  P  A +
Sbjct: 251 KAGTANSAVKVGYVSADGGNTTWLALPGDARN 282



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 113/348 (32%), Gaps = 46/348 (13%)

Query: 80  NLISQDSFKQKITNPD-SIPRFQDWNSLGAQVLVTGRV---IKEGKDR---------LRV 126
             + + +      +PD S   +   N++  + LV G++    ++G +             
Sbjct: 142 KSLPEATLMFAKFSPDASRVAYVSRNNIYVESLVDGKINQLTQDGNNEIVNGTFDWVYEE 201

Query: 127 EFRLWDVK----DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           EF   D      D + I   +  +    W  I + + D IY  I            F   
Sbjct: 202 EFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNV-DSIYPKIQR----------FPYP 250

Query: 183 SVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPR--FSPNQQKVAYATY-DDEDILR 238
              +      +  +  DG N  +L  P   +  + PR  F P   ++        ++  +
Sbjct: 251 KAGTANSAVKVGYVSADGGNTTWLALPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNK 310

Query: 239 VYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           V++     +       +  +  L      R+    K      ++D    +Y V       
Sbjct: 311 VWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEI 370

Query: 295 ERLTNTLFI---NISASYSPDSSQIVFESDREGKEQLYVMQS---NGSDQKRISQDKEAS 348
           + +T   F     + A    D   + F +  +   Q Y+ Q+      + KR+S   ++ 
Sbjct: 371 KPITQGAFDYIQEVGADM--DKGFVYFIASPDNFTQRYLYQARLFGNGEVKRLSPVDQSG 428

Query: 349 YFDPVWSPQGDLIAFT-KFSGEKFAIGVMK-KDGSQERLLVEDSNLQA 394
               + SP G     T   S     I ++        RL+ +++  + 
Sbjct: 429 QHRYIMSPSGKWAVHTFSNSETPPVIDMVSFPAHKSVRLITDNAKAKE 476



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 106/322 (32%), Gaps = 59/322 (18%)

Query: 174 NSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQ 223
            SR+ +VS +   V  ++   +  + +DG N   +       ++E         R+SP+ 
Sbjct: 158 ASRVAYVSRNNIYVESLVDGKINQLTQDGNNE--IVNGTFDWVYEEEFNCRDGFRWSPDG 215

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRSMILAPRFSSNG---KRAL 273
           Q +AY   D +      +++      PK       + G   S +     S++G       
Sbjct: 216 QYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWLA 275

Query: 274 --------ISVQKDEAMDIYSVDLQSNATERLTNTLFI---------------------- 303
                      + +       + +Q     + TN ++I                      
Sbjct: 276 LPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLET 335

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N +  +   +    +ES+R+G   LY +  +G + K I+Q       +         + F
Sbjct: 336 NDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKGFVYF 395

Query: 364 TKFSGEKFAIGVMKK----DGSQERL-LVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSK 417
                      + +     +G  +RL  V+ S       SPSG+  +      +      
Sbjct: 396 IASPDNFTQRYLYQARLFGNGEVKRLSPVDQSGQHRYIMSPSGKWAVHTFSNSETPPVID 455

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           + S   + ++  LI   A A +
Sbjct: 456 MVSFPAH-KSVRLITDNAKAKE 476



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 92/316 (29%), Gaps = 61/316 (19%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPS-RDQILFEPRFSPNQQKVAYATYDD---EDI 236
           +  V     +    V++     ++ L  S  +  L   +FSP+  +VAY + ++   E +
Sbjct: 115 TRRVWRYDTRGDYWVLNLKNGKLQQLGKSLPEATLMFAKFSPDASRVAYVSRNNIYVESL 174

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMIL--------APRFSSNGKRALIS---VQKDEAMDIY 285
           +   +     D   + +      +           R+S +G+         Q     DI 
Sbjct: 175 VDGKINQLTQDGNNEIVNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDII 234

Query: 286 S----------------------------VDLQSNATERLTNTLFINISASYSPD----- 312
           +                            V      T  L   L  +    Y P      
Sbjct: 235 NNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWL--ALPGDARNHYIPRMEFIP 292

Query: 313 SSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTK 365
               +F    +  +   ++++ +   +    I  D++A++     +  W        +  
Sbjct: 293 GCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKYFTWES 352

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS---GRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DG + + + + +             G  + F    D  T   LY   
Sbjct: 353 ERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKG-FVYFIASPDNFTQRYLYQAR 411

Query: 423 LNGRNETLINTPAYAS 438
           L G  E    +P   S
Sbjct: 412 LFGNGEVKRLSPVDQS 427


>gi|302425181|sp|A2CEH0|POC1B_DANRE RecName: Full=POC1 centriolar protein homolog B; AltName: Full=WD
           repeat domain 51B
 gi|123232887|emb|CAM15113.1| WD repeat domain 51B [Danio rerio]
          Length = 490

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 86/238 (36%), Gaps = 15/238 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    SL + +       +       ++    F+P+   VA ++ D      V L    
Sbjct: 35  TGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQ----TVRLWTPS 90

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           I           + + +  FS +G+R + +   D+++ ++ V+ +      L        
Sbjct: 91  IKGESTVFKAHTASVRSVHFSRDGQRLV-TASDDKSVKVWGVERK-KFLYSLNRHTNWVR 148

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A +SPD   I    D      + +  ++      I  D   S     ++  G  IA + 
Sbjct: 149 CARFSPDGRLIASCGD---DRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIA-SS 204

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +     I  ++ +   +   V ++ +   ++ PSG  LI      G + S +  +DL
Sbjct: 205 GADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLI-----SGSSDSTIKILDL 257



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 66/170 (38%), Gaps = 9/170 (5%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             + +I    F+ N K+   +   D+++ I+++  ++ A   + +T  I    +++P  S
Sbjct: 16  GHKDVISCADFNPNNKQLA-TGSCDKSLMIWNLAPKARAFRFVGHTDVI-TGVNFAPSGS 73

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S R+   +L+     G     + +   AS     +S  G  +  T    +   + 
Sbjct: 74  LVA-SSSRDQTVRLWTPSIKGEST--VFKAHTASVRSVHFSRDGQRLV-TASDDKSVKVW 129

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +++      L    + ++   +SP GR +        D   +L+    +
Sbjct: 130 GVERKKFLYSLNRHTNWVRCARFSPDGRLIA---SCGDDRTVRLWDTSSH 176



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 72/215 (33%), Gaps = 21/215 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS + Q++  A+ D      V +      +    +    + +   RFS +G+    S   
Sbjct: 110 FSRDGQRLVTASDDK----SVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIA-SCGD 164

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + ++  D  S+    +        SA++   +S     +       + +     +  
Sbjct: 165 DRTVRLW--DTSSHQCINIFTDYG--GSATFVDFNSSGTCIASSGADNTIKIWDIRTNKL 220

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--- 395
            +  +   A      + P G+ +  +  S     I     D  + RL+      + P   
Sbjct: 221 IQHYKVHNAGVNCFSFHPSGNYLI-SGSSDSTIKI----LDLLEGRLIYTLHGHKGPVLT 275

Query: 396 -TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            T+S  G   +F+     D+   ++  + +  N  
Sbjct: 276 VTFSRDGD--LFASG-GADSQVLMWKTNFDSLNYR 307



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 61/184 (33%), Gaps = 14/184 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y        +   RFSP+ + +A       D   V L DT   +      ++        
Sbjct: 138 YSLNRHTNWVRCARFSPDGRLIASC----GDDRTVRLWDTSSHQCINIFTDYGGSATFVD 193

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDR 322
           F+S+G     S   D  + I+  D+++N   +    +   +N   S+ P  + ++  S  
Sbjct: 194 FNSSGTCIA-SSGADNTIKIW--DIRTNKLIQHYKVHNAGVNCF-SFHPSGNYLISGSS- 248

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                + ++              +       +S  GDL A +  +  +  +     D   
Sbjct: 249 --DSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFA-SGGADSQVLMWKTNFDSLN 305

Query: 383 ERLL 386
            R L
Sbjct: 306 YREL 309


>gi|332030690|gb|EGI70367.1| WD repeat-containing protein 61 [Acromyrmex echinatior]
          Length = 325

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 69/198 (34%), Gaps = 24/198 (12%)

Query: 185 VSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VSG     + +   D G   + L     +      +SP+ + +A    D      + + D
Sbjct: 137 VSGSHAGKIHLYGTDNGKQEQTLDTRGGKFTLSVAYSPDGKYIASGAIDG----IINIFD 192

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNT 300
               +  + +      I +  FS +  + L++   D  M +Y V   +L       ++  
Sbjct: 193 VAYGKVLRTLEGHAMPIRSLCFSPD-SQLLLTASDDGHMKLYDVKDANLAGT----MSGH 247

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS----P 356
               +  ++SPD  Q    S  +   +++ +       +R        + D VWS    P
Sbjct: 248 ASWVLGVAFSPDGQQFA-SSSSDHTVKIWEL------AQRQCLHTFREHKDQVWSVKYNP 300

Query: 357 QGDLIAFTKFSGEKFAIG 374
           Q + I  +    +   + 
Sbjct: 301 QRNNIIASVSEDKSINLY 318



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 60/222 (27%), Gaps = 15/222 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  +  D   +++        +     S +  K A           + L D         
Sbjct: 61  VWELKEDALKLKHKLTGYSLGVVSIAISSDGSKCA----SSSLDSSLKLWDLYSGDKLLS 116

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSP 311
           I      I    FS + K  + S      + +Y  D      + L T      +S +YSP
Sbjct: 117 IEVGPVDIWTLVFSPDDKFIV-SGSHAGKIHLYGTD-NGKQEQTLDTRGGKFTLSVAYSP 174

Query: 312 DSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           D   I       G     + +         R  +          +SP   L+  T     
Sbjct: 175 DGKYIA-----SGAIDGIINIFDVAYGKVLRTLEGHAMPIRSLCFSPDSQLLL-TASDDG 228

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +  +K       +    S +    +SP G+    S    
Sbjct: 229 HMKLYDVKDANLAGTMSGHASWVLGVAFSPDGQQFASSSSDH 270



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 72/201 (35%), Gaps = 24/201 (11%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            T   +D ++V+ +     +   ++  +   +++   SS+G +            +   D
Sbjct: 51  VTASVDDSVKVWELKEDALKLKHKLTGYSLGVVSIAISSDGSKCA---SSSLDSSLKLWD 107

Query: 289 LQSNATERLTNTLFINISAS------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           L S    +L   L I +         +SPD   IV  S   GK  LY    NG  ++ + 
Sbjct: 108 LYSGD--KL---LSIEVGPVDIWTLVFSPDDKFIVSGSH-AGKIHLYGTD-NGKQEQTLD 160

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPS 400
                      +SP G  IA     G    I +      +    +E   +  ++  +SP 
Sbjct: 161 TRGGKFTLSVAYSPDGKYIASGAIDG---IINIFDVAYGKVLRTLEGHAMPIRSLCFSPD 217

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
            + L+ +     D   KLY +
Sbjct: 218 SQLLLTASD---DGHMKLYDV 235


>gi|298246655|ref|ZP_06970460.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297549314|gb|EFH83180.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 614

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 56/365 (15%), Positives = 115/365 (31%), Gaps = 48/365 (13%)

Query: 103 WNSL-GAQVLVTGRVIKEGKDR------LRVEFRL--WDVKDRKQIIGKKFFSSPASWRK 153
           W     A  L+  ++     DR      L   ++L  WDV   +              R+
Sbjct: 13  WKQRFRAPTLLRSQIAAHAPDRGLLVSNLSGSYQLHAWDVPTGQV-------------RQ 59

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           I+H     +   +       + R ++  +      +   + V    G   + LTP     
Sbjct: 60  ISHEPKGALVGRL-----AGDGRFVYYLQDEDGDQMGRFVRV-PFAGGEPQELTPELPPY 113

Query: 214 LFEPRFSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPR----FSS 267
             +P  +P    + +   + E  D+  V L        P  + +     L  R     SS
Sbjct: 114 FADPCLNPTGTVLGFLVGEQEGVDLYVVPLGPGDDVGVPHLVFHNPVPGLLGRKLLALSS 173

Query: 268 NGKRALISVQKDE---AMDIYSVDLQSNA-TERLTNTLFI-----NISASYSPDSSQIVF 318
             + A++  Q         + ++DL +    ++L           + S    P   ++  
Sbjct: 174 AAQTAVMISQPHNPYTYERLLAIDLATGECIDQLQAEPGTFVSLGDYSPV--PGDERLWA 231

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
              R  + Q  +     S++  ++ D+ A  F   WSP G  +   +         +   
Sbjct: 232 TIHRGDRRQRIIWNPRTSERILLALDELADAFPCSWSPDGKRLLLWQEDQGHKRFAICTL 291

Query: 379 DGSQERLLVE-DSNLQAPTWSPSGR-SLIFSRKKDGD-TGSKLYSIDLNGRNETLINTPA 435
                ++L E D    +  +  +G     +   + G   G ++ ++D     +       
Sbjct: 292 ANQSIQVLSELDGTYWSSYFGNAGEIYTHWGMIQGGTVLGPEIVALDAATGTQLRTLMAF 351

Query: 436 YASDP 440
            A  P
Sbjct: 352 EAVSP 356


>gi|32471645|ref|NP_864638.1| serine/threonine protein kinase [Rhodopirellula baltica SH 1]
 gi|32397016|emb|CAD72319.1| serine/threonine protein kinase [Rhodopirellula baltica SH 1]
          Length = 1073

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 88/248 (35%), Gaps = 24/248 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           SL     +G N++      D+   +P  R S    ++A+   D                 
Sbjct: 410 SLAFQAYNGHNLKATKELLDKHRPKPEERGS---NRLAFEILDY----------LITPPP 456

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K +    S       S NG +  ISV KD   +++ VDLQS              + + 
Sbjct: 457 SKLLTQHNSPATEVALSRNG-QIAISVSKDG--EVHVVDLQSEKLTHRYKLSGRLDAIAI 513

Query: 310 SPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           S D+   +   + + G   + + +     +         +     +S  G L A    +G
Sbjct: 514 SSDNKHFLTGLNGDVGFNSITLREIATGTETLGLLGHWHNIESAAFSSDGTLFA---TAG 570

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               + V + DG+  + +   S  ++  ++  G +L + ++        L+++DL+   E
Sbjct: 571 RYRDVQVHRFDGTAVKTVYGGSRNESLHFAGEGHTLAYVKEVGKQR--LLHAVDLDTDQE 628

Query: 429 TLINTPAY 436
           T +     
Sbjct: 629 TRVPVEGE 636


>gi|271968032|ref|YP_003342228.1| peptidase S9 prolyl oligopeptidase [Streptosporangium roseum DSM
           43021]
 gi|270511207|gb|ACZ89485.1| peptidase S9 prolyl oligopeptidase [Streptosporangium roseum DSM
           43021]
          Length = 661

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 57/167 (34%), Gaps = 5/167 (2%)

Query: 185 VSGIIKNSL-CVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLM 242
            +G +++ L  +   D    R L          P + SP+ + VA    +  D  R+   
Sbjct: 227 PAGELRSRLVAIATADAGAQRILAEQDGHDFDGPVKVSPDGRLVACVRGNHADTSRIPET 286

Query: 243 DTRIDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
              I       G+     L P    ++ + +   ++        I+ V    +   RLT 
Sbjct: 287 TLWIVDLATGEGHAAGGGLWPADIAWAPDSRSLYVAADHQGRRPIFQVPADGSEPVRLTP 346

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                +S + +PD +     S  +       + + G+ ++  S   E
Sbjct: 347 DDAAYLSLNVAPDGAVYALRSAVDRAAGPVRVTAGGTVEELASPAPE 393



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 43/117 (36%), Gaps = 19/117 (16%)

Query: 264 RFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           R S +G R +  VQ      K     ++ + L      RLT ++     A ++     ++
Sbjct: 21  RLSPDGTRLVSVVQALNPDGKSYGTSLWEIPLDGRRPYRLTRSVKGEAGAEFTAAGD-LL 79

Query: 318 FESDR---------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           F S R         E    L+++ + G + ++I+           ++  G  + F  
Sbjct: 80  FGSRRPDPTVKDSDEETPALWLLPAAGGEARQIASRPGGVAG---FATGGQSVVFGS 133



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 61/217 (28%), Gaps = 22/217 (10%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRS---MILAPRFSSNGKRALISVQKD------EAM 282
            +  +    L D       + +           +   + +G   + +           + 
Sbjct: 175 GEPRLFAGILGDDERLTEVRDLTPQPGKALTNASYDVTPDGGTVVTTWSVPLPAGELRSR 234

Query: 283 DIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFES------DREGKEQLYVMQSN 334
            +      + A   L   +    +     SPD   +           R  +  L+++   
Sbjct: 235 LVAIATADAGAQRILAEQDGHDFDGPVKVSPDGRLVACVRGNHADTSRIPETTLWIVDLA 294

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQ 393
             +    +        D  W+P    +        +  I  +  DGS+   L  +D+   
Sbjct: 295 TGEGH--AAGGGLWPADIAWAPDSRSLYVAADHQGRRPIFQVPADGSEPVRLTPDDAAYL 352

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +   +P G   +++ +   D  +    +   G  E L
Sbjct: 353 SLNVAPDGA--VYALRSAVDRAAGPVRVTAGGTVEEL 387


>gi|294813439|ref|ZP_06772082.1| Putative peptide hydrolase [Streptomyces clavuligerus ATCC 27064]
 gi|294326038|gb|EFG07681.1| Putative peptide hydrolase [Streptomyces clavuligerus ATCC 27064]
          Length = 614

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 59/173 (34%), Gaps = 5/173 (2%)

Query: 260 ILAPRFSSNG-KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +  P ++ +   R+L         ++Y+ D  +    ++T+          +PD + I +
Sbjct: 22  VSLPDWAPDAPDRSLFVSNATGTYELYAWDRATGEQRQVTDRPSGTTDGVLTPDGTAIWW 81

Query: 319 ESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGV 375
            SD +G E  +++ Q  G  +   +    A  +         G  +       +   I V
Sbjct: 82  FSDTDGDEFGVWLRQPFGGGEDVPAAPGLAPSYGAGLAIGRHGASVVGRSTDEDGSTIHV 141

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRN 427
           ++       +     +      S  G  +     + GD   S L  + L+G  
Sbjct: 142 VRDGAEPVEIYRHRESAGVGDLSHDGTLIAVEHTEHGDAMHSSLRVVRLDGST 194



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 88/314 (28%), Gaps = 39/314 (12%)

Query: 91  ITNPDSIPRFQDWNSLGAQ-VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
              P   P +    ++G     V GR   E    + V      V+D  + +        A
Sbjct: 105 PAAPGLAPSYGAGLAIGRHGASVVGRSTDEDGSTIHV------VRDGAEPVEIYRHRESA 158

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
               ++H                 +  ++ V  +     + +SL V+  DG+ +  L  +
Sbjct: 159 GVGDLSH-----------------DGTLIAVEHTEHGDAMHSSLRVVRLDGSTVAELDDT 201

Query: 210 RDQILFEP----RFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
               +        F+P          +         + D       +        + A  
Sbjct: 202 EGGTVELGLEVLGFAPVAGDTRLLVAHQRRGRWEPMIWDVATGERSEPALGLPGDVSA-E 260

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +  +G   LI+   +   +++  DL S    R+         A+  PD S     S    
Sbjct: 261 WYPDGSGLLIAHSHEARGELFRYDLASGEAIRVDTPKGSVSGATARPDGSVEYLWSSAAL 320

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++       S    +  D       P   P  D   +    G +    V +  G+   
Sbjct: 321 PPRVR------STAGGVVLDPPGP-RAPESVPVED--VWVDGPGGRVHALVQRPAGASGP 371

Query: 385 LLVEDSNLQAPTWS 398
           L         PTW 
Sbjct: 372 LPTVFDIHGGPTWH 385


>gi|265751795|ref|ZP_06087588.1| dipeptidyl aminopeptidase [Bacteroides sp. 3_1_33FAA]
 gi|263236587|gb|EEZ22057.1| dipeptidyl aminopeptidase [Bacteroides sp. 3_1_33FAA]
          Length = 759

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 63/212 (29%), Gaps = 65/212 (30%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDR-----EGKEQLYVMQSNG 335
                ++ Q+     + N +       +S D+S++ ++ + R     + +   +V+    
Sbjct: 98  PANMLLNPQTGKPISVRNFI-------FSEDNSKVLIYTNTRRVWRYDTRGDYWVLNLKN 150

Query: 336 SDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
              +++     EA+     +SP    +A+   +     I V      +   L +D N + 
Sbjct: 151 GKLQQLGKSLPEATLMFAKFSPDASRVAYVSRN----NIYVESLVDGKINQLTQDGNNEI 206

Query: 394 -----------------APTWSPSGRSLIFS-RKKDGDTGSKLYS--------------- 420
                               WSP G+ + +      G     + +               
Sbjct: 207 VNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYP 266

Query: 421 -------------IDLNGRNETLINTPAYASD 439
                        +  +G N T +  P  A +
Sbjct: 267 KAGTANSAVKVGYVSADGGNTTWLALPGDARN 298



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 113/348 (32%), Gaps = 46/348 (13%)

Query: 80  NLISQDSFKQKITNPD-SIPRFQDWNSLGAQVLVTGRV---IKEGKDR---------LRV 126
             + + +      +PD S   +   N++  + LV G++    ++G +             
Sbjct: 158 KSLPEATLMFAKFSPDASRVAYVSRNNIYVESLVDGKINQLTQDGNNEIVNGTFDWVYEE 217

Query: 127 EFRLWDVK----DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           EF   D      D + I   +  +    W  I + + D IY  I            F   
Sbjct: 218 EFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNV-DSIYPKIQR----------FPYP 266

Query: 183 SVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPR--FSPNQQKVAYATY-DDEDILR 238
              +      +  +  DG N  +L  P   +  + PR  F P   ++        ++  +
Sbjct: 267 KAGTANSAVKVGYVSADGGNTTWLALPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNK 326

Query: 239 VYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           V++     +       +  +  L      R+    K      ++D    +Y V       
Sbjct: 327 VWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEI 386

Query: 295 ERLTNTLFI---NISASYSPDSSQIVFESDREGKEQLYVMQS---NGSDQKRISQDKEAS 348
           + +T   F     + A    D   + F +  +   Q Y+ Q+      + KR+S   ++ 
Sbjct: 387 KPITQGAFDYIQEVGADM--DKGFVYFIASPDNFTQRYLYQARLFGNGEVKRLSPVDQSG 444

Query: 349 YFDPVWSPQGDLIAFT-KFSGEKFAIGVMK-KDGSQERLLVEDSNLQA 394
               + SP G     T   S     I ++        RL+ +++  + 
Sbjct: 445 QHRYIMSPSGKWAVHTFSNSETPPVIDMVSFPAHKSVRLITDNAKAKE 492



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 106/322 (32%), Gaps = 59/322 (18%)

Query: 174 NSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQ 223
            SR+ +VS +   V  ++   +  + +DG N   +       ++E         R+SP+ 
Sbjct: 174 ASRVAYVSRNNIYVESLVDGKINQLTQDGNNE--IVNGTFDWVYEEEFNCRDGFRWSPDG 231

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRSMILAPRFSSNG---KRAL 273
           Q +AY   D +      +++      PK       + G   S +     S++G       
Sbjct: 232 QYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWLA 291

Query: 274 --------ISVQKDEAMDIYSVDLQSNATERLTNTLFI---------------------- 303
                      + +       + +Q     + TN ++I                      
Sbjct: 292 LPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLET 351

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N +  +   +    +ES+R+G   LY +  +G + K I+Q       +         + F
Sbjct: 352 NDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKGFVYF 411

Query: 364 TKFSGEKFAIGVMKK----DGSQERL-LVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSK 417
                      + +     +G  +RL  V+ S       SPSG+  +      +      
Sbjct: 412 IASPDNFTQRYLYQARLFGNGEVKRLSPVDQSGQHRYIMSPSGKWAVHTFSNSETPPVID 471

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           + S   + ++  LI   A A +
Sbjct: 472 MVSFPAH-KSVRLITDNAKAKE 492



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 92/316 (29%), Gaps = 61/316 (19%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPS-RDQILFEPRFSPNQQKVAYATYDD---EDI 236
           +  V     +    V++     ++ L  S  +  L   +FSP+  +VAY + ++   E +
Sbjct: 131 TRRVWRYDTRGDYWVLNLKNGKLQQLGKSLPEATLMFAKFSPDASRVAYVSRNNIYVESL 190

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMIL--------APRFSSNGKRALIS---VQKDEAMDIY 285
           +   +     D   + +      +           R+S +G+         Q     DI 
Sbjct: 191 VDGKINQLTQDGNNEIVNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDII 250

Query: 286 S----------------------------VDLQSNATERLTNTLFINISASYSPD----- 312
           +                            V      T  L   L  +    Y P      
Sbjct: 251 NNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWL--ALPGDARNHYIPRMEFIP 308

Query: 313 SSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTK 365
               +F    +  +   ++++ +   +    I  D++A++     +  W        +  
Sbjct: 309 GCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKYFTWES 368

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS---GRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DG + + + + +             G  + F    D  T   LY   
Sbjct: 369 ERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKG-FVYFIASPDNFTQRYLYQAR 427

Query: 423 LNGRNETLINTPAYAS 438
           L G  E    +P   S
Sbjct: 428 LFGNGEVKRLSPVDQS 443


>gi|262383019|ref|ZP_06076156.1| dipeptidyl peptidase IV [Bacteroides sp. 2_1_33B]
 gi|262295897|gb|EEY83828.1| dipeptidyl peptidase IV [Bacteroides sp. 2_1_33B]
          Length = 733

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 101/322 (31%), Gaps = 82/322 (25%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDEDIL 237
           N++ ++  DG N      ++D I+                 +SP    +A+   D+  + 
Sbjct: 160 NNVHILSPDGRNTIVTRETQDGIVCGQAVHQREFGITKGMFWSPKGSALAFYRMDERMVT 219

Query: 238 RVYLMDTRI--------------------DRAPKRIGNFRSMILA---P--------RFS 266
              L++                            ++   +++ L    P         +S
Sbjct: 220 AYPLVNIDTRCATPVPHKYPMAGMKSHEVTVGVYQVATGQTVWLETGLPKEKYLTNIAWS 279

Query: 267 SNGKRALISVQKDEAMDIYSVD---LQSNATERL-TNTLFINISAS----YSP-DSSQIV 317
            + K   I+    E  +++ V    L       L T T    +       + P D  + +
Sbjct: 280 PDEKSIYIAELNREQNEMHLVRYSALTGKKEADLFTETDRCYVEPQHPVLFLPNDPDKFI 339

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---------KFSG 368
           ++S+ +G   LY+  + G + ++++  +        +S  G+ + F             G
Sbjct: 340 WQSEADGYNHLYLYDTTGKELRKLTGGEWVVTKVLGFSKDGNKVIFEGTAPHPVSPNMQG 399

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTW---------SPSGRS-LIFSRKKDGDTGSKL 418
                 + + D      L     +   +W         SPSG   + +           L
Sbjct: 400 TGMQRYIWETD------LRTGDIMNCLSWKVGVHLWLLSPSGEYAIDYVSSPSTPRDIDL 453

Query: 419 YSIDLNGRNETLINTPAYASDP 440
             +    ++  +I+T   A DP
Sbjct: 454 IRV----KDAKVISTLLSAPDP 471


>gi|209543363|ref|YP_002275592.1| Dipeptidyl-peptidase IV [Gluconacetobacter diazotrophicus PAl 5]
 gi|209531040|gb|ACI50977.1| Dipeptidyl-peptidase IV [Gluconacetobacter diazotrophicus PAl 5]
          Length = 757

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 72/240 (30%), Gaps = 72/240 (30%)

Query: 252 RIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----- 305
           R+ +      +APR S +G         D    +Y V   S  T RLT+    +      
Sbjct: 159 RVSDVPGRGWIAPRLSPDGAHVAAVRDND----VYVVAPGSGDTVRLTHG-GTDTLTHGL 213

Query: 306 -------------SASYSPDSSQIVF-ESDREGKEQLYVMQS------------------ 333
                           +SPD   +++ E+D  G E+ Y+                     
Sbjct: 214 AEFAAAEELSRPDGLWWSPDGQSLLYEEADTSGVEKHYIADPQHPSIAPVEFRYPRAGTA 273

Query: 334 -----------NGSDQKRISQDKEA-SYFDPVWSPQGD----LIAFTKFSGEKFAIGVMK 377
                       G   + ++ D  A  Y   V  P+G     L+   +   ++  + V  
Sbjct: 274 NARIRLGLVARTGGPTRWVTWDNAAFPYLARVVWPKGRGPLSLVVLNRAQTQEKVLRVDP 333

Query: 378 KDGSQERLL-------------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             G    LL              E      P W P G   +++ ++DG    +L   D  
Sbjct: 334 ATGLTTTLLDEHDPAWINITPAGEGRGHALPRWLPDGSGFLWAAERDGRWRLELRRADGT 393



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 84/288 (29%), Gaps = 42/288 (14%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H I+D  + SI   +        F      +   +  L ++ R G   R++T       +
Sbjct: 250 HYIADPQHPSIAPVE--------FRYPRAGTANARIRLGLVARTGGPTRWVTWDNAAFPY 301

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
                     +A   +         ++  R     K +    +  L              
Sbjct: 302 ----------LARVVWPKGRGPLSLVVLNRAQTQEKVLRVDPATGLTTTL---------- 341

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + + +   I            L           + PD S  ++ ++R+G+ +L + +++G
Sbjct: 342 LDEHDPAWINITPAGEGRGHAL---------PRWLPDGSGFLWAAERDGRWRLELRRADG 392

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVEDSNLQA 394
           +    ++                  +  T      + AI  +   G     L  +  L A
Sbjct: 393 TLDHAVTPPDLPFVSLDDVDADAGTVTVTANPDRIRTAIYRLDLHGGTPVKLGTEPGLHA 452

Query: 395 PTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             ++  G    F     G D  +     D +G    L   PA A  P 
Sbjct: 453 TAFA-EGGHARFVDSVTGADGSAATVVRDRDG--HVLATVPAVAETPT 497


>gi|50545019|ref|XP_500061.1| YALI0A14542p [Yarrowia lipolytica]
 gi|18076173|emb|CAC81004.1| transcriptional repressor, TUP1 [Yarrowia lipolytica]
 gi|49645926|emb|CAG83990.1| YALI0A14542p [Yarrowia lipolytica]
          Length = 647

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 71/206 (34%), Gaps = 21/206 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT---RIDRAPKRIGNFRSMILAPRF 265
             + ++   RFS + + +A        I  V          D +  R G+    I +  F
Sbjct: 342 DHNSVVCCVRFSADGKYIATGCNRSAQIFDVQTGQLICRLQDDSVDREGDL--YIRSVCF 399

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREG 324
           S +GK    +  +D+ + ++  D++S +   + T       S  +S +   I   S   G
Sbjct: 400 SPDGKYLA-TGAEDKQIRVW--DIKSQSIRHVFTGHEQDIYSLDFSRNGRHIASGS---G 453

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--Q 382
              + +          ++   E        SP G  +A          + +         
Sbjct: 454 DRTVRMWDIESGQCT-LTLSIEDGVTTVAISPDGKFVAAGSLDKS---VRIWDTSTGFLV 509

Query: 383 ERLLVEDSN---LQAPTWSPSGRSLI 405
           ERL   D +   + +  ++P+G  L+
Sbjct: 510 ERLEAPDGHKDSVYSVAFTPNGMDLV 535


>gi|312130859|ref|YP_003998199.1| peptidase s9b dipeptidylpeptidase iv domain protein [Leadbetterella
           byssophila DSM 17132]
 gi|311907405|gb|ADQ17846.1| peptidase S9B dipeptidylpeptidase IV domain protein [Leadbetterella
           byssophila DSM 17132]
          Length = 718

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 31/290 (10%), Positives = 78/290 (26%), Gaps = 60/290 (20%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYA---------------TYDDEDILRVYLMDTRID 247
            + LT   +++   P FSP+   +AY                    +D  +  L      
Sbjct: 109 EKRLTNDPEKVEKNPTFSPDSNYIAYTKENDLYAYHLKSGKEVRHTQDGTKTILNGYATW 168

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----TERLTNTLF 302
              + I    +   A  +S + K        +    ++ +   +         R      
Sbjct: 169 VYWEEIFGRGTAFRAFWWSPDSKTLAFMRFDETKTPMFPIYSSTGQYGFLEETRYPKAGG 228

Query: 303 IN----------------------------ISASYSPDSSQIVFESDREGKEQ--LYVMQ 332
            N                                ++ D S ++ +    G +   +Y + 
Sbjct: 229 NNPTAKIGFVQPDTPGITWADFNEQDEQYFGWPKWTLDGSGLMVQWINRGNDHLKIYNVS 288

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQ-------GDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                +K + ++ +  +     + +       G  +           + +   DG     
Sbjct: 289 PKNGQKKLVYEETQKEWISIDEADERLTLLDSGKEMVIISDKTGWKQLYLYSIDGKLINK 348

Query: 386 LVEDSNLQAPTWSPS--GRSLIF-SRKKDGDTGSKLYSIDLNGRNETLIN 432
           + +        +      + + F +R  +      LY + L+G+N   + 
Sbjct: 349 ITDGKYTVTRVFGIDQKEKVVYFHARGIENSARFDLYRVGLDGKNLKRLT 398



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/307 (12%), Positives = 96/307 (31%), Gaps = 41/307 (13%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F     +      +   K      D  G          +Q    P+++ +   +     +
Sbjct: 217 FLEETRYPKAGGNNPTAKIGFVQPDTPGITWADFNEQDEQYFGWPKWTLDGSGLMVQWIN 276

Query: 233 DE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN-----------GKRALISVQKDE 280
              D L++Y +  +  +        +   +    S +           GK  +I   K  
Sbjct: 277 RGNDHLKIYNVSPKNGQKKLVYEETQKEWI----SIDEADERLTLLDSGKEMVIISDKTG 332

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNGS 336
              +Y   +      ++T+  +            ++V+   R      +  LY +  +G 
Sbjct: 333 WKQLYLYSIDGKLINKITDGKYTVTRVFGIDQKEKVVYFHARGIENSARFDLYRVGLDGK 392

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           + KR++   + ++     SP     A T   +    A+ ++ + G + + L      +  
Sbjct: 393 NLKRLTF-GDYNHRQISASPDLKYFATTYSNTRTPMAVTILDRTGKRVKELGTAKGDELD 451

Query: 396 TW-----------SPSGRS-----LIFSRKKDGDTGSKLYSIDLNGRNE--TLINTPAYA 437
            +           S  G+      +++  K +      L  I + G  +  T+ +   ++
Sbjct: 452 KYALNLPEIVRVKSNDGKFDLPMSIVYPEKMEAGKKYPL-MISIYGGPDAGTVYDQWGWS 510

Query: 438 SDPQWVG 444
              QW+ 
Sbjct: 511 PRSQWMA 517



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 45/128 (35%), Gaps = 36/128 (28%)

Query: 313 SSQIVFESD---REGKEQLYVMQSNG-------SDQKRISQDKEASYFDPVWSPQGDLIA 362
             +  F SD   +  + +L V   NG         +KR++ D E    +P +SP  + IA
Sbjct: 74  GKREDFSSDLLTKTIQPRLQVTVKNGDLYLLSEGTEKRLTNDPEKVEKNPTFSPDSNYIA 133

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSN----------------------LQAPTWSPS 400
           +TK +     +        +E    +D                         +A  WSP 
Sbjct: 134 YTKEND----LYAYHLKSGKEVRHTQDGTKTILNGYATWVYWEEIFGRGTAFRAFWWSPD 189

Query: 401 GRSLIFSR 408
            ++L F R
Sbjct: 190 SKTLAFMR 197



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 61/198 (30%), Gaps = 59/198 (29%)

Query: 289 LQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-- 345
           L     +RLTN    +  + ++SPDS+ I +  + +    LY        + R +QD   
Sbjct: 104 LSEGTEKRLTNDPEKVEKNPTFSPDSNYIAYTKEND----LYAYHLKSGKEVRHTQDGTK 159

Query: 346 ------------------EASYFDPVWSPQGDLIAFTKFSGEK---FAIGVM-------- 376
                               ++    WSP    +AF +F   K   F I           
Sbjct: 160 TILNGYATWVYWEEIFGRGTAFRAFWWSPDSKTLAFMRFDETKTPMFPIYSSTGQYGFLE 219

Query: 377 -----KKDGSQER------------LLVEDSN------LQAPTWSPSGRSLIFSRKKDGD 413
                K  G+               +   D N         P W+  G  L+      G+
Sbjct: 220 ETRYPKAGGNNPTAKIGFVQPDTPGITWADFNEQDEQYFGWPKWTLDGSGLMVQWINRGN 279

Query: 414 TGSKLYSIDLNGRNETLI 431
              K+Y++      + L+
Sbjct: 280 DHLKIYNVSPKNGQKKLV 297


>gi|237712093|ref|ZP_04542574.1| dipeptidyl aminopeptidase [Bacteroides sp. 9_1_42FAA]
 gi|229453414|gb|EEO59135.1| dipeptidyl aminopeptidase [Bacteroides sp. 9_1_42FAA]
          Length = 759

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 63/212 (29%), Gaps = 65/212 (30%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDR-----EGKEQLYVMQSNG 335
                ++ Q+     + N +       +S D+S++ ++ + R     + +   +V+    
Sbjct: 98  PANMLLNPQTGKPISVRNFI-------FSEDNSKVLIYTNTRRVWRYDTRGDYWVLNLKN 150

Query: 336 SDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
              +++     EA+     +SP    +A+   +     I V      +   L +D N + 
Sbjct: 151 GKLQQLGKSLPEATLMFAKFSPDASRVAYVSRN----NIYVESLVDGKINQLTQDGNNEI 206

Query: 394 -----------------APTWSPSGRSLIFS-RKKDGDTGSKLYS--------------- 420
                               WSP G+ + +      G     + +               
Sbjct: 207 VNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYP 266

Query: 421 -------------IDLNGRNETLINTPAYASD 439
                        +  +G N T +  P  A +
Sbjct: 267 KAGTANSAVKVGYVSADGGNTTWLALPGDARN 298



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 55/348 (15%), Positives = 113/348 (32%), Gaps = 46/348 (13%)

Query: 80  NLISQDSFKQKITNPD-SIPRFQDWNSLGAQVLVTGRV---IKEGKDR---------LRV 126
             + + +      +PD S   +   N++  + LV G++    ++G +             
Sbjct: 158 KSLPEATLMFAKFSPDASRVAYVSRNNIYVESLVDGKINQLTQDGNNEIVNGTFDWVYEE 217

Query: 127 EFRLWDVK----DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           EF   D      D + I   +  +    W  I + + D IY  I            F   
Sbjct: 218 EFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDIINNV-DSIYPKIQR----------FPYP 266

Query: 183 SVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPR--FSPNQQKVAYATY-DDEDILR 238
              +      +  +  DG N  +L  P   +  + PR  F P   ++        ++  +
Sbjct: 267 KAGTANSAVKVGYVSADGGNTTWLALPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNK 326

Query: 239 VYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           V++     +       +  +  L      R+    K      ++D    +Y V       
Sbjct: 327 VWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEI 386

Query: 295 ERLTNTLFI---NISASYSPDSSQIVFESDREGKEQLYVMQS---NGSDQKRISQDKEAS 348
           + +T   F     + A    D   + F +  +   Q Y+ Q+      + KR+S   ++ 
Sbjct: 387 KPITQGAFDYIQEVGADM--DKGFVYFIASPDNFTQRYLYQARLFGNGEVKRLSPVDQSG 444

Query: 349 YFDPVWSPQGDLIAFT-KFSGEKFAIGVMK-KDGSQERLLVEDSNLQA 394
               + SP G     T   S     I ++        RL+ +++  + 
Sbjct: 445 QHRYIMSPSGKWAVHTFSNSETPPVIDMVSFPAHKSVRLITDNAKAKE 492



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 106/322 (32%), Gaps = 59/322 (18%)

Query: 174 NSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQ 223
            SR+ +VS +   V  ++   +  + +DG N   +       ++E         R+SP+ 
Sbjct: 174 ASRVAYVSRNNIYVESLVDGKINQLTQDGNNE--IVNGTFDWVYEEEFNCRDGFRWSPDG 231

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRSMILAPRFSSNG---KRAL 273
           Q +AY   D +      +++      PK       + G   S +     S++G       
Sbjct: 232 QYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWLA 291

Query: 274 --------ISVQKDEAMDIYSVDLQSNATERLTNTLFI---------------------- 303
                      + +       + +Q     + TN ++I                      
Sbjct: 292 LPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLET 351

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N +  +   +    +ES+R+G   LY +  +G + K I+Q       +         + F
Sbjct: 352 NDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKGFVYF 411

Query: 364 TKFSGEKFAIGVMKK----DGSQERL-LVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSK 417
                      + +     +G  +RL  V+ S       SPSG+  +      +      
Sbjct: 412 IASPDNFTQRYLYQARLFGNGEVKRLSPVDQSGQHRYIMSPSGKWAVHTFSNSETPPVID 471

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           + S   + ++  LI   A A +
Sbjct: 472 MVSFPAH-KSVRLITDNAKAKE 492



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 92/316 (29%), Gaps = 61/316 (19%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPS-RDQILFEPRFSPNQQKVAYATYDD---EDI 236
           +  V     +    V++     ++ L  S  +  L   +FSP+  +VAY + ++   E +
Sbjct: 131 TRRVWRYDTRGDYWVLNLKNGKLQQLGKSLPEATLMFAKFSPDASRVAYVSRNNIYVESL 190

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMIL--------APRFSSNGKRALIS---VQKDEAMDIY 285
           +   +     D   + +      +           R+S +G+         Q     DI 
Sbjct: 191 VDGKINQLTQDGNNEIVNGTFDWVYEEEFNCRDGFRWSPDGQYIAYWQSDTQGTGWFDII 250

Query: 286 S----------------------------VDLQSNATERLTNTLFINISASYSPD----- 312
           +                            V      T  L   L  +    Y P      
Sbjct: 251 NNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWL--ALPGDARNHYIPRMEFIP 308

Query: 313 SSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTK 365
               +F    +  +   ++++ +   +    I  D++A++     +  W        +  
Sbjct: 309 GCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKYFTWES 368

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS---GRSLIFSRKKDGDTGSKLYSID 422
                  +  + +DG + + + + +             G  + F    D  T   LY   
Sbjct: 369 ERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKG-FVYFIASPDNFTQRYLYQAR 427

Query: 423 LNGRNETLINTPAYAS 438
           L G  E    +P   S
Sbjct: 428 LFGNGEVKRLSPVDQS 443


>gi|226228960|ref|YP_002763066.1| putative dipeptidyl peptidase [Gemmatimonas aurantiaca T-27]
 gi|226092151|dbj|BAH40596.1| putative dipeptidyl peptidase [Gemmatimonas aurantiaca T-27]
          Length = 803

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/286 (13%), Positives = 85/286 (29%), Gaps = 43/286 (15%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISD-------DIYQSITGEKGDFNSRILFVSES 183
            D  +     G+    SP S    A+ +          I  S   +        ++    
Sbjct: 203 IDGSEGNPFTGQSLAWSPNSRHLAAYRVKPGYRRVVRYIESSPADQVQPKYMERVYTKPG 262

Query: 184 VVSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +  + + +L   D     N+  L       L +P++  + +   +   +        + 
Sbjct: 263 DLLDLQQPALFDADARTQVNVNPLLFPDPYSLSQPQWRRDGRGYTFEYNERGHQRYRVIE 322

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
               +  P+ + + +S         + +RA  ++     +    V+              
Sbjct: 323 VNAENGTPRVLIDEQSKTF-----IDYRRAAGTLADGGRVFRADVN-------------- 363

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLI 361
                    D ++IV+ S+R+G   LY+        K +I++ +               I
Sbjct: 364 ---------DGNEIVWLSERDGWAHLYLYDGRSGAVKNQITKGEFVVRAVQRVDSVARTI 414

Query: 362 AFTK------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
            F+                 +  DG+    L +     A T+SP G
Sbjct: 415 TFSAGGMDKAQDPYFAHYYRVNFDGTGLTPLTDAPADHAVTFSPDG 460



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 27/237 (11%), Positives = 68/237 (28%), Gaps = 52/237 (21%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP------RFSSNGKRAL 273
           SP+ +++AY          VY+       +     +       P       +S N +   
Sbjct: 172 SPDGKRIAYIAN-----YNVYVRPVGGATSAGVALSIDGSEGNPFTGQSLAWSPNSRHLA 226

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVM 331
               K                  + ++    +   Y     + V+    D    +Q  + 
Sbjct: 227 AYRVKPGYR---------RVVRYIESSPADQVQPKYM----ERVYTKPGDLLDLQQPALF 273

Query: 332 QSNGS---DQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAIGVMKKDGSQERLL 386
            ++     +   +      S   P W   G      + +   +++ +  +  +    R+L
Sbjct: 274 DADARTQVNVNPLLFPDPYSLSQPQWRRDGRGYTFEYNERGHQRYRVIEVNAENGTPRVL 333

Query: 387 VEDSNLQAPTWS-----------------PSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +++ +     +                    G  +++  ++DG     LY    +GR
Sbjct: 334 IDEQSKTFIDYRRAAGTLADGGRVFRADVNDGNEIVWLSERDGWAHLYLY----DGR 386


>gi|108761715|ref|YP_631614.1| putative lipoprotein [Myxococcus xanthus DK 1622]
 gi|108465595|gb|ABF90780.1| putative lipoprotein [Myxococcus xanthus DK 1622]
          Length = 345

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 82/234 (35%), Gaps = 15/234 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T   D +     FSP+  +V  A       + V    T   +    +G+  + +    FS
Sbjct: 121 TRQFDVMTHNGAFSPDGTEVWTALMAKPGAVVVLDSQTLEPKQTIDVGDMPAEV---TFS 177

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+ A ++    ++ ++  ++  + A  + T T+  N   ++ P +  +++  + +GK 
Sbjct: 178 QDGRYAFVA--NGDSNNVSVINAATKAVVK-TVTVGANPVGAW-PGNDGLMYVDNEDGKS 233

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            L  + ++  D  R              +P GDL  +   +     I       +++  L
Sbjct: 234 -LTGIDASTLDVARTYPLGFTPAMA-ATAPNGDL--WVTDTDNGKVIFFAAGTTTRQGEL 289

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
              +      +S  G     +      T   L  +D+  R      T     + 
Sbjct: 290 ATGAGAHGIAFSADGA----TSFITNQTAGTLSIVDVASRTVRKTLTVGTQPNG 339


>gi|228941522|ref|ZP_04104072.1| TolB domain protein [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228974452|ref|ZP_04135020.1| TolB domain protein [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228981046|ref|ZP_04141348.1| TolB domain protein [Bacillus thuringiensis Bt407]
 gi|228778706|gb|EEM26971.1| TolB domain protein [Bacillus thuringiensis Bt407]
 gi|228785288|gb|EEM33299.1| TolB domain protein [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228818172|gb|EEM64247.1| TolB domain protein [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326942136|gb|AEA18032.1| hypothetical protein CT43_CH4371 [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 412

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 89/250 (35%), Gaps = 55/250 (22%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG   +     + + +  P++S + + +AY   + ++IL +Y +     +
Sbjct: 35  RHHNLWI-KVDGKEKQLT---KGENITGPKWSHDGEWLAYVKGEKQNILELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 + + D++        N  F N+SA 
Sbjct: 86  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLNTFDVEKK------NADFENVSAG 135

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD    +  S+       +     G+    + +D   +               
Sbjct: 136 VGDYAWYPDGKNFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 191

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPT 396
                      WSP    I+F       +S +   + +++ DGS+  ++ +   N +   
Sbjct: 192 DFLALVASGFKWSPDQKWISFLAIPTASWSADSNTLCLVRADGSRFEIVDQMLLNTEWFK 251

Query: 397 WSPSGRSLIF 406
           W+PS   L +
Sbjct: 252 WAPSKNILAY 261



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       + + K DG +E+ L +  N+  P WS  G  L + + +      +LY
Sbjct: 30  KVAFIRH----HNLWI-KVDG-KEKQLTKGENITGPKWSHDGEWLAYVKGEK-QNILELY 82

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 83  RLK-DGKKVTPFHS--EASNYQWSP 104



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 76/202 (37%), Gaps = 29/202 (14%)

Query: 218 RFSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           ++SP+Q+ +++        + D   +  V    +R +   + + N      AP      K
Sbjct: 202 KWSPDQKWISFLAIPTASWSADSNTLCLVRADGSRFEIVDQMLLNTEWFKWAPS-----K 256

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREGK 325
             L  ++    + + +  L+      L     T   +++   ++  D+  IV  +   G 
Sbjct: 257 NILAYIEGSGRVALENKHLKIKELPALQQQTFTPKGYVDWDFTWKNDNVIIVSRAKEGGF 316

Query: 326 ---------EQLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                      LY + S    Q +I++       + P++  + + + + +   +K  I +
Sbjct: 317 ETLPEKRPFPSLYEINSTSDKQYQITKSSNKQGDYHPIFMKKSNQLIWIRSDRKKANIWI 376

Query: 376 MKKDGSQERLLVEDSNLQAPTW 397
              DG  E+  +E  N+  P W
Sbjct: 377 AHSDGKHEKKWIE--NVDIPEW 396


>gi|218440298|ref|YP_002378627.1| hypothetical protein PCC7424_3363 [Cyanothece sp. PCC 7424]
 gi|218173026|gb|ACK71759.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 826

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 88/283 (31%), Gaps = 19/283 (6%)

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES---VVSGIIKNSLCVMDR 198
             +  +P         ++  ++Q++    G  NS  L        ++       +  +  
Sbjct: 515 LSYLDTPKDQNIPEKQLNFSLFQTLNTTSGSVNSLTLTPDGRQLVILGDRSVIEVWTLTP 574

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
               +          +     SP+QQ +A  +        + L     +   K +   + 
Sbjct: 575 STPILTQSLTHHCGEVLAFSLSPDQQILA-TSDHTNTRNYIKLWHLPTETPEKTLFGHKK 633

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIV 317
            I +   S +G+  +        + ++  +L++    + L            +PD   ++
Sbjct: 634 EIYSLMISPDGQTLI---SASHKIKLW--NLKTGEPFQTLFGHREWITCLGITPDGHTLI 688

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S     + L V      +        +        SP G   A +  +     +  +K
Sbjct: 689 SGSQ---DKTLRVWHLTNGELYCTLTGHQGEIKTVAISPDGRF-AVSGSTDNTLIVWDIK 744

Query: 378 KDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             G   + L E    + A T+S  G+   F    D DT  K++
Sbjct: 745 A-GKLVQTLNEHTGAVNAVTFSRDGQY--FVSGSD-DTTIKVW 783


>gi|66812260|ref|XP_640309.1| transcriptional repressor TUP1 [Dictyostelium discoideum AX4]
 gi|74960805|sp|O76734|TUP1_DICDI RecName: Full=General transcriptional corepressor tupA
 gi|3406654|gb|AAC29438.1| transcriptional repressor TUP1 [Dictyostelium discoideum]
 gi|60468292|gb|EAL66300.1| transcriptional repressor TUP1 [Dictyostelium discoideum AX4]
          Length = 579

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/290 (15%), Positives = 90/290 (31%), Gaps = 45/290 (15%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTP---------SRDQILFEPRFSPNQQKVAYATYD 232
            S  +G  K +  ++   G N    T            + ++    FS + + +A     
Sbjct: 246 MSEENGKEKGTDWLV---GYNPSVQTNLNIDLLHNLQHNSVVCCVNFSNDGKYLATGCNR 302

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
              I  V           +   +    I +  FS +G     +  +D+ + ++  D+ + 
Sbjct: 303 SAQIYDVDTGKKVHAFVDESEKDGDLYIRSVCFSPDGNYLA-TGAEDKTVKVW--DIHTK 359

Query: 293 ATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----- 346
             +       ++  S  YS D     F     G ++  +           +   E     
Sbjct: 360 KIQHTFYGHELDIYSLDYSSDGR---FIVSGSGDKKAKIWDIEKGKCA-FTLGNEEVGPK 415

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSL 404
                   SP G L+A          + +         ER      ++ +  +SP G+SL
Sbjct: 416 NGVTSVAMSPDGRLVAAGSLDN---IVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSL 472

Query: 405 IFSRKKDGDTGSKLYSI-----------DLNGRNETLINTPAYASDPQWV 443
                   D   KL+ +             NG  + +++  A++ D  W+
Sbjct: 473 A---SGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSV-AFSPDGSWL 518



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 59/194 (30%), Gaps = 16/194 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+   +A    D      V + D    +           I +  +SS+G+  + S   
Sbjct: 335 FSPDGNYLATGAEDK----TVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFIV-SGSG 389

Query: 279 DEAMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           D+   I+ ++ +      L N          S + SPD   +   S       + +  + 
Sbjct: 390 DKKAKIWDIE-KGKCAFTLGNEEVGPKNGVTSVAMSPDGRLVAAGSL---DNIVRLWDAQ 445

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
                   +    S +   +SP G  +A            +             + +   
Sbjct: 446 TGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDF 505

Query: 394 --APTWSPSGRSLI 405
             +  +SP G  LI
Sbjct: 506 VLSVAFSPDGSWLI 519



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 6/153 (3%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +G + N + + D                ++   FSP+ + +A  + D    L      
Sbjct: 430 VAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGS 489

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R        +  +L+  FS +G    IS  KD ++  +  D ++  T  +      
Sbjct: 490 RSRSRCRATFNGHKDFVLSVAFSPDGSWL-ISGSKDRSVQFW--DPRNGTTHMMLQGHKN 546

Query: 304 NI-SASYSP-DSSQIVFESDREG-KEQLYVMQS 333
           ++ S + SP ++S  VF +     + +L+   S
Sbjct: 547 SVISVALSPKNNSHGVFATGSGDFRSRLWKYDS 579


>gi|326441848|ref|ZP_08216582.1| peptide hydrolase [Streptomyces clavuligerus ATCC 27064]
          Length = 605

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 59/173 (34%), Gaps = 5/173 (2%)

Query: 260 ILAPRFSSNG-KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +  P ++ +   R+L         ++Y+ D  +    ++T+          +PD + I +
Sbjct: 13  VSLPDWAPDAPDRSLFVSNATGTYELYAWDRATGEQRQVTDRPSGTTDGVLTPDGTAIWW 72

Query: 319 ESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGV 375
            SD +G E  +++ Q  G  +   +    A  +         G  +       +   I V
Sbjct: 73  FSDTDGDEFGVWLRQPFGGGEDVPAAPGLAPSYGAGLAIGRHGASVVGRSTDEDGSTIHV 132

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRN 427
           ++       +     +      S  G  +     + GD   S L  + L+G  
Sbjct: 133 VRDGAEPVEIYRHRESAGVGDLSHDGTLIAVEHTEHGDAMHSSLRVVRLDGST 185



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 88/314 (28%), Gaps = 39/314 (12%)

Query: 91  ITNPDSIPRFQDWNSLGAQ-VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA 149
              P   P +    ++G     V GR   E    + V      V+D  + +        A
Sbjct: 96  PAAPGLAPSYGAGLAIGRHGASVVGRSTDEDGSTIHV------VRDGAEPVEIYRHRESA 149

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
               ++H                 +  ++ V  +     + +SL V+  DG+ +  L  +
Sbjct: 150 GVGDLSH-----------------DGTLIAVEHTEHGDAMHSSLRVVRLDGSTVAELDDT 192

Query: 210 RDQILFEP----RFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
               +        F+P          +         + D       +        + A  
Sbjct: 193 EGGTVELGLEVLGFAPVAGDTRLLVAHQRRGRWEPMIWDVATGERSEPALGLPGDVSA-E 251

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +  +G   LI+   +   +++  DL S    R+         A+  PD S     S    
Sbjct: 252 WYPDGSGLLIAHSHEARGELFRYDLASGEAIRVDTPKGSVSGATARPDGSVEYLWSSAAL 311

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++       S    +  D       P   P  D   +    G +    V +  G+   
Sbjct: 312 PPRVR------STAGGVVLDPPGP-RAPESVPVED--VWVDGPGGRVHALVQRPAGASGP 362

Query: 385 LLVEDSNLQAPTWS 398
           L         PTW 
Sbjct: 363 LPTVFDIHGGPTWH 376


>gi|260911209|ref|ZP_05917812.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260634689|gb|EEX52776.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 304

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 62/202 (30%), Gaps = 33/202 (16%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-----F 318
             S  G   L++   D+   +  +DL +   + +T        A  SPD  ++V     F
Sbjct: 41  AISGQGDFLLLTA--DDNSGLTKLDLSTGKAQNITRAAGAGYDARVSPDGKRVVYRENSF 98

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S       L  +       + +           + +     +   + + + F   V  K
Sbjct: 99  TSGHLRMVSLRSINLGSGQSRELVAPTRNLQGVGINNQAALPVTRGQVTAKGFEGKVSDK 158

Query: 379 DG---------------SQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYS 420
            G                + R L  +   ++   P+ SP G  +++    +G     L  
Sbjct: 159 SGVVLSINNRQLMISRNGKTRNLSPNGKDKSYLWPSLSPDGTKILYYVGAEGAFVCNL-- 216

Query: 421 IDLNGRNETLINTPAYASDPQW 442
              +G N   +        PQW
Sbjct: 217 ---DGSNVKPL---GMMRAPQW 232



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/220 (20%), Positives = 78/220 (35%), Gaps = 30/220 (13%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRAL-----ISVQKDEAMDIYSVDLQSNATERLT-- 298
                + I          R S +GKR +      +      + + S++L S  +  L   
Sbjct: 65  STGKAQNITRAAGAGYDARVSPDGKRVVYRENSFTSGHLRMVSLRSINLGSGQSRELVAP 124

Query: 299 ----NTLFINISASYSPDSSQIV---F---ESDREG-----KEQLYVMQSNGSDQKRISQ 343
                 + IN  A+      Q+    F    SD+ G       +  ++  NG  +     
Sbjct: 125 TRNLQGVGINNQAALPVTRGQVTAKGFEGKVSDKSGVVLSINNRQLMISRNGKTRNLSPN 184

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
            K+ SY  P  SP G  I +   +   F   V   DGS  + L     ++AP W      
Sbjct: 185 GKDKSYLWPSLSPDGTKILYYVGAEGAF---VCNLDGSNVKPL---GMMRAPQWWDDATV 238

Query: 404 LIFSRKKDGDT--GSKLYSIDLNGRNETLINTPAYASDPQ 441
           +    + DG+    S++ + +L G  ++L      A  P+
Sbjct: 239 VGMYDQDDGEFVYASRIVATNLKGDKQSLTPDSLIAMYPK 278



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 55/151 (36%), Gaps = 15/151 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +S V   I N   ++ R+G         +D+    P  SP+  K+ Y    +   +    
Sbjct: 158 KSGVVLSINNRQLMISRNGKTRNLSPNGKDKSYLWPSLSPDGTKILYYVGAEGAFVC--- 214

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----AMDIYSVDLQSNATERL 297
                    K +     M+ AP++  +     +  Q D     A  I + +L+    + L
Sbjct: 215 --NLDGSNVKPL----GMMRAPQWWDDATVVGMYDQDDGEFVYASRIVATNLK-GDKQSL 267

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQL 328
           T    I +    S  + +I F S  +GK  +
Sbjct: 268 TPDSLIAMYPKVSAQAGKIAF-STPDGKAYI 297


>gi|294672864|ref|YP_003573480.1| S9 family peptidase [Prevotella ruminicola 23]
 gi|294473368|gb|ADE82757.1| peptidase, S9C (acylaminoacyl-peptidase) subfamily [Prevotella
           ruminicola 23]
          Length = 806

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 61/222 (27%), Gaps = 38/222 (17%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQ 277
           S + Q V  +    +            D    R+ +  S    PR+    K        +
Sbjct: 175 SADGQFVCVSYQTTDRGGNTRWNYELRDVKSGRLISQPSRN--PRWMP--KSIAWLEEEK 230

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG------------- 324
           +     +Y VD ++    R    +    S + SP    ++F  + EG             
Sbjct: 231 EGSHRVLYKVDPKTGVRTRFAYDI-PEGSYTVSPTEDYLIFTLEEEGPQEDKEVFEILEM 289

Query: 325 ---------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------ 369
                    +  L          +RI+   +  Y     S  G  +              
Sbjct: 290 DDRQPGWRKRNYLAKYDIKTGITQRITFGNKGEYLY-DISQDGSKLLVISNRSRLTKRPT 348

Query: 370 -KFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               + VM       + LL     L   ++SP G  ++F   
Sbjct: 349 TVSDVFVMDAHTLKVDTLLSGAEFLGGGSFSPDGSQILFVGN 390



 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 50/353 (14%), Positives = 111/353 (31%), Gaps = 67/353 (18%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSL-GAQVLVTGRV------IKEGKDRLRVEFRLW 131
           F+  +  +++    +P  +    D   + G  +   G+         +     R  + L 
Sbjct: 142 FDTPTSITYQLTPNHPYMVHDLTDGKRVRGINLSADGQFVCVSYQTTDRGGNTRWNYELR 201

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTIS---------DDIYQSITGEKGDFNSRILFVSE 182
           DVK  + I          + R +  +I+           +   +  + G   +R  +   
Sbjct: 202 DVKSGRLI-----SQPSRNPRWMPKSIAWLEEEKEGSHRVLYKVDPKTGV-RTRFAYDIP 255

Query: 183 SV---VSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
                VS      +  ++ +G    + +    +    +P +   +++   A YD +    
Sbjct: 256 EGSYTVSPTEDYLIFTLEEEGPQEDKEVFEILEMDDRQPGW---RKRNYLAKYDIK---- 308

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-------DIYSVDLQS 291
                       +RI            S +G + L+   +           D++ +D  +
Sbjct: 309 --------TGITQRITFGNKGEYLYDISQDGSKLLVISNRSRLTKRPTTVSDVFVMDAHT 360

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQL-----------------YVMQSN 334
              + L +        S+SPD SQI+F  + E   ++                 ++    
Sbjct: 361 LKVDTLLSGAEFLGGGSFSPDGSQILFVGNPEAFNRIGCQLPAEVTPSMTENELFLFDIA 420

Query: 335 GSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
               K +++D + S  D  WS   G  I F+    +   + V+         L
Sbjct: 421 SKQVKPLTKDFDPSIDDVDWSWADGQ-IYFSAEDRDYVNMFVLNPKTGIITKL 472


>gi|255013026|ref|ZP_05285152.1| dipeptidyl peptidase IV [Bacteroides sp. 2_1_7]
          Length = 713

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 101/322 (31%), Gaps = 82/322 (25%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDEDIL 237
           N++ ++  DG N      ++D I+                 +SP    +A+   D+  + 
Sbjct: 140 NNVHILSPDGRNTIVTRETQDGIVCGQAVHQREFGITKGMFWSPKGSALAFYRMDERMVT 199

Query: 238 RVYLMDTRI--------------------DRAPKRIGNFRSMILA---P--------RFS 266
              L++                            ++   +++ L    P         +S
Sbjct: 200 AYPLVNIDTRCATPVPHKYPMAGMKSHEVTVGVYQVATGQTVWLETGLPKEKYLTNIAWS 259

Query: 267 SNGKRALISVQKDEAMDIYSVD---LQSNATERL-TNTLFINISAS----YSP-DSSQIV 317
            + K   I+    E  +++ V    L       L T T    +       + P D  + +
Sbjct: 260 PDEKSIYIAELNREQNEMHLVRYSALTGKKEADLFTETDRCYVEPQHPVLFLPNDPDKFI 319

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---------KFSG 368
           ++S+ +G   LY+  + G + ++++  +        +S  G+ + F             G
Sbjct: 320 WQSEADGYNHLYLYDTTGKELRKLTGGEWVVTKVLGFSKDGNKVIFEGTAPHPVSPNMQG 379

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTW---------SPSGRS-LIFSRKKDGDTGSKL 418
                 + + D      L     +   +W         SPSG   + +           L
Sbjct: 380 TGMQRYIWETD------LRTGDIMNCLSWKVGVHRWLLSPSGEYAIDYVSSPSTPRDIDL 433

Query: 419 YSIDLNGRNETLINTPAYASDP 440
             I    ++  +I+T   A DP
Sbjct: 434 VRI----KDAKVISTLLSAPDP 451


>gi|168704988|ref|ZP_02737265.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 616

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 65/222 (29%), Gaps = 19/222 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R   P+    L    FS +    A      +D    +   T      +   + R  I A 
Sbjct: 107 RIEQPAGSAWLTALAFSADG---AVVASGHDDGKLRFWDATSFALVGEVQAHPRKAISAL 163

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDR 322
            FS NGK         E + +   D  +      L +      +  +SPDS+ +V     
Sbjct: 164 AFSPNGK---FVATAGEDLTVRVWDAATRRPVAELKSHTDRIPALVWSPDSALLV---SA 217

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                  V +    D   +            +SP G  +A    +   F I +       
Sbjct: 218 GWDTSARVWRPPHPDPLMLLNSHADQVVTAAFSPDGRYLA---CADSDFDIHLWVDAEGA 274

Query: 383 ERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSI 421
            R  V   + +      +SP G  L        D    ++ +
Sbjct: 275 ARGPVLRGHNEEVRCLCFSPDGTKLA---SAGADRVVHVWDV 313



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 93/322 (28%), Gaps = 41/322 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH----TISDDIYQSITGE 169
           G V+  G D  ++ F  WD      ++G+       +   +A            + +T  
Sbjct: 126 GAVVASGHDDGKLRF--WD-ATSFALVGEVQAHPRKAISALAFSPNGKFVATAGEDLTVR 182

Query: 170 KGDFNSRILFVSESVVSGIIKNSLC-----------------VMDRDGANIRYLTPSRDQ 212
             D  +R         +  I   +                  V      +   L  S   
Sbjct: 183 VWDAATRRPVAELKSHTDRIPALVWSPDSALLVSAGWDTSARVWRPPHPDPLMLLNSHAD 242

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +    FSP+ +   Y    D D      +D         +      +    FS +G + 
Sbjct: 243 QVVTAAFSPDGR---YLACADSDFDIHLWVDAEGAARGPVLRGHNEEVRCLCFSPDGTKL 299

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                      ++  D+++       N    + S +  P +   +  S   G + + V  
Sbjct: 300 A---SAGADRVVHVWDVRAGKLIAGPNPRGRH-SIAVLPGAPLRLASS---GAQNVRVWD 352

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLL-VEDS 390
               D+   +    A  F    SP G  +      G  +   +    DGS    L     
Sbjct: 353 VESGDEVAPTNLCPA--FSVAASPDGKWL---GIGGTDYFSQLWNAADGSLAHSLEATKP 407

Query: 391 NLQAPTWSPSGRSLIFSRKKDG 412
            +   T+SP  ++L  +   DG
Sbjct: 408 PVGFVTFSPDSKTLAHTSPADG 429



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 26/205 (12%), Positives = 65/205 (31%), Gaps = 30/205 (14%)

Query: 217 PRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           P FS    P+ + +     D        L +         +   +  +    FS + K  
Sbjct: 366 PAFSVAASPDGKWLGIGGTD----YFSQLWNAADGSLAHSLEATKPPVGFVTFSPDSKTL 421

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVF-------ESDR 322
             +   D  + +++   ++   + +        +    ++ PD  ++           +R
Sbjct: 422 AHTSPADGLVWLWAC--ETGQPDMIIVEAADACTLETIAFHPDGKRVACGGADYMRTGER 479

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G   + V      ++       +       + PQG  +A    +G + A+ V   +   
Sbjct: 480 DGA--VCVWDVTTKEK---LYTIDVGVTALAFDPQGKYLA---GAGLEDAVYVWDAETQA 531

Query: 383 ERLLV--EDSNLQAPTWSPSGRSLI 405
              +       + A  + P+G  L+
Sbjct: 532 TVFVFGGHQGTISAVCFDPTGSYLL 556


>gi|157373946|ref|YP_001472546.1| peptidase S9 prolyl oligopeptidase [Shewanella sediminis HAW-EB3]
 gi|157316320|gb|ABV35418.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sediminis HAW-EB3]
          Length = 827

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 87/200 (43%), Gaps = 13/200 (6%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNATE---RLTNTLF 302
           R  + + ++     A ++  +  R  I ++  +  D +  ++DL+  + +   RL +  +
Sbjct: 364 RKIQLMQDWGWSQSAVQWQESANRVAIMLEAVDNKDRWIATLDLEKGSMKTQHRLHDEAW 423

Query: 303 INISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +N + +   + P+++ + + S+  G   +YV Q+ G   + ++Q K     D    P+  
Sbjct: 424 VNYNFNQFGWLPETNNLYYLSEETGYSHIYVKQA-GKQAEPLTQGKFV-VSDITLGPKAQ 481

Query: 360 LIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            I +   K       +  +     ++  L +       T SP G+SL+ +  +  + G +
Sbjct: 482 FIYYKANKQHPGIDNVYRVSVKTGKDEQLTQWDGQLDYTLSPDGKSLLLNASRRTEPG-E 540

Query: 418 LYSIDLNGRNETLINTPAYA 437
           L+ + + G  + L +  + A
Sbjct: 541 LFILPIGGAIKQLTSYTSDA 560



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/139 (10%), Positives = 48/139 (34%), Gaps = 8/139 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P    + Y + +       ++   +  +  + +   + ++         +       K
Sbjct: 433 WLPETNNLYYLSEETG---YSHIYVKQAGKQAEPLTQGKFVVSDITLGPKAQFIYYKANK 489

Query: 279 --DEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                 ++Y V +++   E+LT     ++   + SPD   ++  + R  +     +   G
Sbjct: 490 QHPGIDNVYRVSVKTGKDEQLTQWDGQLDY--TLSPDGKSLLLNASRRTEPGELFILPIG 547

Query: 336 SDQKRISQDKEASYFDPVW 354
              K+++     ++    W
Sbjct: 548 GAIKQLTSYTSDAFKKYQW 566


>gi|148887018|sp|Q9W7F2|WDR1A_XENLA RecName: Full=WD repeat-containing protein 1-A; AltName:
           Full=Actin-interacting protein 1-A; Short=xAIP1-A
 gi|50417412|gb|AAH77202.1| AIP1 protein [Xenopus laevis]
 gi|116283884|gb|AAH41232.1| AIP1 protein [Xenopus laevis]
          Length = 607

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/282 (16%), Positives = 93/282 (32%), Gaps = 43/282 (15%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   V+++++ D + ++      +    + I NP     + +     A   V  
Sbjct: 9   FASLPQMERGVAKILAGDPKGNNFLYTNGKSVIIRNIDNPAIADIYTE----HAHQAVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           R    G          + R+WD   ++ ++  ++       + IA               
Sbjct: 65  RYAPSGFYIASGDTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-------GANIRYLTP 208
              +           G+    I  ++   +       L     D       G   ++   
Sbjct: 125 EKFASVFLWDTGSSVGEITGNIKVINSVDIKQTRPYRLVTGSDDNCCAFLEGPPFKFKFT 184

Query: 209 SRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
             D   F    RFSP+  K+A A  D     +++L D +       +G  +     I A 
Sbjct: 185 MSDHSRFVNCVRFSPDGSKLASAGADG----QIFLYDGKTGEKVCSLGGSKAHDGGIYAV 240

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +S +G + L S   D+   I+ V   S  T   T  L  ++
Sbjct: 241 SWSPDGTQLL-SASGDKTTKIWDVAANSAVT---TFNLGSDV 278



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 81/282 (28%), Gaps = 57/282 (20%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E+G           +        S+ + + D   I  +           R++P+   +A 
Sbjct: 16  ERGVAKILAGDPKGNNFLYTNGKSVIIRNIDNPAIADIYTEHAHQAVVARYAPSGFYIA- 74

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---------- 278
            + D    LR++    +          F   I    ++ + KR  +  +           
Sbjct: 75  -SGDTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFASVFLW 133

Query: 279 ----------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                          I SVD++     RL              D +   F    EG    
Sbjct: 134 DTGSSVGEITGNIKVINSVDIKQTRPYRLVTGS----------DDNCCAFL---EGPPFK 180

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG------VMKKDGSQ 382
           +    +         D         +SP G  +A     G+ F         V    GS+
Sbjct: 181 FKFTMS---------DHSRFVNCVRFSPDGSKLASAGADGQIFLYDGKTGEKVCSLGGSK 231

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 D  + A +WSP G  L+      GD  +K++ +  N
Sbjct: 232 A----HDGGIYAVSWSPDGTQLL---SASGDKTTKIWDVAAN 266


>gi|322705730|gb|EFY97314.1| Periodic tryptophan protein 2 [Metarhizium anisopliae ARSEF 23]
          Length = 893

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 94/229 (41%), Gaps = 21/229 (9%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D  NI  L+ S++ I F    + + + +A+       +L V+   +      K+ G+F 
Sbjct: 289 PDFNNIHKLSISQNDIDFV-TINKSGEWLAFGASKLGQLL-VWEWQSE-SYILKQQGHFD 345

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQI 316
           SM     +S +G+R  I+   D  + ++  D++S       T       +  ++   + +
Sbjct: 346 SMNSL-VYSPDGQRI-ITTADDGKIKVW--DIESGFCIVTFTEHTSGVTACEFAKKGN-V 400

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +F +  +G  + + +     + +  +     S+      P G+++A        F + + 
Sbjct: 401 LFTASLDGSIRAWDL-IRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSLD--SFDVHIW 457

Query: 377 KKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSI 421
                  +LL + S  + P     +SP+G SL+       D  ++++SI
Sbjct: 458 SVQTG--QLLDQMSGHEGPVSALAFSPNGDSLVSGSW---DRTARIWSI 501


>gi|281344057|gb|EFB19641.1| hypothetical protein PANDA_008376 [Ailuropoda melanoleuca]
          Length = 400

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 75/199 (37%), Gaps = 21/199 (10%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           ++ + + +       +   + ++    F+ +G   L+S  +D+ + I+ ++      + L
Sbjct: 130 QIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVL 189

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +  L      S SPD S +       G++ +++         R  +  ++S     +SP 
Sbjct: 190 SGHLQWVYCCSVSPDCSMLC---SAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPD 246

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-------------SNLQAPTWSPSGRSL 404
             L+    +      I      G + R L                S+L++  +SP G   
Sbjct: 247 SALLVTASYDTN--VIMWDPYTGERLRFLHHTQLDPPMDDSDVHISSLRSVCFSPEG--- 301

Query: 405 IFSRKKDGDTGSKLYSIDL 423
           ++      D   ++++++L
Sbjct: 302 LYLATVADDRLLRIWALEL 320



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 72/247 (29%), Gaps = 41/247 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 12  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKN 71

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKR---------------ALISVQKDEAM 282
           DT+   +PK            +  +P  S   ++                L +   D  +
Sbjct: 72  DTKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDISCLILATGLNDGQI 131

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 132 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 190

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 191 -GHLQWVYCCSVSPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 248

Query: 403 SLIFSRK 409
            L+ +  
Sbjct: 249 LLVTASY 255


>gi|169795864|ref|YP_001713657.1| putative regucalcin family protein [Acinetobacter baumannii AYE]
 gi|213157443|ref|YP_002319488.1| senescence marker protein-30 [Acinetobacter baumannii AB0057]
 gi|215483349|ref|YP_002325560.1| SMP-30/Gluconolaconase/LRE-like region family protein
           [Acinetobacter baumannii AB307-0294]
 gi|239504240|ref|ZP_04663550.1| SMP-30/Gluconolaconase/LRE-like region family protein
           [Acinetobacter baumannii AB900]
 gi|301345666|ref|ZP_07226407.1| SMP-30/Gluconolaconase/LRE-like region family protein
           [Acinetobacter baumannii AB056]
 gi|169148791|emb|CAM86659.1| conserved hypothetical protein; putative regucalcin family protein
           [Acinetobacter baumannii AYE]
 gi|213056603|gb|ACJ41505.1| senescence marker protein-30 [Acinetobacter baumannii AB0057]
 gi|213986349|gb|ACJ56648.1| SMP-30/Gluconolaconase/LRE-like region family protein
           [Acinetobacter baumannii AB307-0294]
          Length = 292

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 10/158 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQI----LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           L  +D D  N++++      +    L + R     + V  +    ED     L     D 
Sbjct: 75  LYQLDFDTGNLKFICNPEPDLPQNRLNDGRVDRQGRFVFGSMNRLEDGNTASLYRLDADY 134

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +++ N  +   +  +S +G +   +      +  Y  DL++      T    I+ S  
Sbjct: 135 KIEKLENNINTSNSICWSPDGAKLYFADTWQGEIWSYDYDLETGQISNKTIFCKIDTSDG 194

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            S D S +    DREG   L+  +       R   D +
Sbjct: 195 GSADGSTV----DREGY--LWNAKVYSGQLVRYRPDGQ 226


>gi|294142370|ref|YP_003558348.1| dipeptidyl peptidase IV [Shewanella violacea DSS12]
 gi|293328839|dbj|BAJ03570.1| dipeptidyl peptidase IV [Shewanella violacea DSS12]
          Length = 754

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 63/222 (28%), Gaps = 47/222 (21%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALI-SVQKDE--AM 282
            + D           T      +   +      +PR    S +GKR    + +KD+    
Sbjct: 25  TSTDLNTAKAAVTGGTMPLSIERLYASPALAGTSPRGLKLSPDGKRVTYLAGRKDDQYFY 84

Query: 283 DIYSVDLQSNATE------RLTNTLFINIS------ASYSPDSSQIVFESDRE------G 324
           D++ +D+ S          +LT     +                   F SD         
Sbjct: 85  DLWQMDVASGKQSILLNADKLTIGELSDEEKARRERQRIYGKGIMEYFWSDDSQALLIPA 144

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              LY    +      +    E    D   SP+G+ ++F +       + V+    S+  
Sbjct: 145 SGVLYYFSLDDGSVNLL-PTGEGFVTDARLSPKGNYVSFVREQ----NLFVLDLKTSKLT 199

Query: 385 LLVEDS------------------NLQAPTWSPSGRSLIFSR 408
            +  D                    +    WSP   ++ ++R
Sbjct: 200 AMTTDGGGAIKNAMAEFVAQEEMGRMTGYWWSPDETAIAYTR 241



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 77/299 (25%), Gaps = 87/299 (29%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI-------------------------DRAPKRIG 254
           SP+ ++V Y     +D     L    +                          R  +RI 
Sbjct: 65  SPDGKRVTYLAGRKDDQYFYDLWQMDVASGKQSILLNADKLTIGELSDEEKARRERQRIY 124

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               M     +S + +  LI         +Y   L   +   L         A  SP  +
Sbjct: 125 GKGIMEYF--WSDDSQALLIPASG----VLYYFSLDDGSVNLLPTGEGFVTDARLSPKGN 178

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQG 358
            + F  +    + L+V+    S    ++ D   +  + +                WSP  
Sbjct: 179 YVSFVRE----QNLFVLDLKTSKLTAMTTDGGGAIKNAMAEFVAQEEMGRMTGYWWSPDE 234

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------------------------ 394
             IA+T+       +    +  +    L E     A                        
Sbjct: 235 TAIAYTRIDESGVELVTRNEIYADGIKLTEQRYPYAGKNNVTIKLAVVTLADQKKSWIDL 294

Query: 395 ----------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
                      +W P  + L +  +        L  + L   ++++  T        WV
Sbjct: 295 GKEQDIYLPRVSWLPDSKRLSYQWQSRDQQSLDLRVVSLAQIDKSI--TLVEERSDAWV 351



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 75/222 (33%), Gaps = 41/222 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDR---APKRIGNFRSMILA------------ 262
            +SP++  +AY   D+  +  V   +   D      +R        +             
Sbjct: 229 WWSPDETAIAYTRIDESGVELVTRNEIYADGIKLTEQRYPYAGKNNVTIKLAVVTLADQK 288

Query: 263 --------------PRFS--SNGKRALISVQKDE--AMDIYSVDLQ------SNATERLT 298
                         PR S   + KR     Q  +  ++D+  V L       +   ER  
Sbjct: 289 KSWIDLGKEQDIYLPRVSWLPDSKRLSYQWQSRDQQSLDLRVVSLAQIDKSITLVEERSD 348

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             + +N    +       ++ S+R+G   LY++  +G  +K+++          +   + 
Sbjct: 349 AWVNLNNDLHFLKQQESFIWASERDGFNHLYLIGLDGKVKKQLTSGDWTVDEVELVDEKT 408

Query: 359 DLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             I F+       +  +  +  +G +   + + S + +P ++
Sbjct: 409 GWIYFSGRKTLVTEKHLYRVPLNGGEVESISQRSGMHSPVFA 450


>gi|229104986|ref|ZP_04235641.1| TolB domain protein [Bacillus cereus Rock3-28]
 gi|228678414|gb|EEL32636.1| TolB domain protein [Bacillus cereus Rock3-28]
          Length = 402

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 80/232 (34%), Gaps = 57/232 (24%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           + + +  P++S + + +AY     E  L +Y +     +  K++  F S     ++S   
Sbjct: 42  KGEYITGPKWSHDGEWLAYVKGKKEGSLELYRL-----KDGKKVTPFHSEASNYQWSPTE 96

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----SYSPDSSQIVFESDREG 324
                         + + D++        NT F N+SA     ++ PD  +    S+   
Sbjct: 97  NIIAFIFTG----TLNTFDVEKK------NTDFENVSAGVGDYAWYPDGKKFFVSSEAHL 146

Query: 325 KEQLYVMQSNGSDQKRISQDKEAS---------------------YFDPVWSPQGDLIAF 363
               +     G+    + +D   +                          WSP    I+F
Sbjct: 147 LPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHDDFLALVASGFQWSPDQKWISF 202

Query: 364 -----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWSPSGRSLIF 406
                  +S +   + +++ DGS+     ++L+     +   W+P+   L +
Sbjct: 203 LAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK---WAPANNILAY 251



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAF +       +        +E+ L +   +  P WS  G  L + + K  +   +LY
Sbjct: 20  KIAFIRHHDLWIKVE------GKEKQLTKGEYITGPKWSHDGEWLAYVKGKK-EGSLELY 72

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 73  RLK-DGKKVTPFHS--EASNYQWSP 94


>gi|118387616|ref|XP_001026912.1| WD-repeat protein HUSSY-07, putative [Tetrahymena thermophila]
 gi|89308679|gb|EAS06667.1| WD-repeat protein HUSSY-07, putative [Tetrahymena thermophila
           SB210]
          Length = 494

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 64/176 (36%), Gaps = 26/176 (14%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPN 222
           +  T  KG  N R++       SG   N+L + D  D            + +   +FSP+
Sbjct: 340 EKYTKLKGSKNERLV-------SGSDDNTLYMWDPVDSRKPIIRLTGHTKPVNHVQFSPD 392

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKD 279
            +    A++D         +          I +FR  + +     +S +  R  +S  KD
Sbjct: 393 GRYFISASFDKN-------LKLWDGFNGAYIASFRGHVASVYQIAWSPD-NRLFVSGSKD 444

Query: 280 EAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             M ++  D+++      L           +SPD  ++       GK++L  +  N
Sbjct: 445 STMKVW--DIKTKKLMFDLPGHADEVYGVDWSPDGLKVC----SGGKDKLLKIWKN 494



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 71/193 (36%), Gaps = 32/193 (16%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P     +   +FSP+ Q +A  + D    +R + ++T + +   + G  R+ +L  ++S
Sbjct: 125 LPGHTDSVLSVQFSPDGQNLASGSGDT--TVRFWDVNTELPKETGK-GGHRNWVLVIQWS 181

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSP-----DSSQIVFE 319
            NGK        D   DI   D ++     LT         S S+ P     D       
Sbjct: 182 PNGKMLA---SGDMNGDICLWDPETGKQIGLTMKGHNKWITSISWEPLHMNKDCELFASA 238

Query: 320 SDREGKEQLYVMQSN------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           S ++   +++  +S       G   K I++              G  + ++        +
Sbjct: 239 S-KDASIRIWSSRSQQCCICFGGHSKSITKVLWG----------GQGLIYSSSEDTTIKV 287

Query: 374 GVMKKDGSQERLL 386
              KKDGS E+ L
Sbjct: 288 W--KKDGSMEKEL 298



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 40/133 (30%), Gaps = 6/133 (4%)

Query: 273 LISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           L+S   D  + ++   + S     RLT          +SPD    +  S     + L + 
Sbjct: 353 LVSGSDDNTLYMWD-PVDSRKPIIRLTGHTKPVNHVQFSPDGRYFISASF---DKNLKLW 408

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                      +   AS +   WSP   L   +        +  +K       L      
Sbjct: 409 DGFNGAYIASFRGHVASVYQIAWSPDNRLFV-SGSKDSTMKVWDIKTKKLMFDLPGHADE 467

Query: 392 LQAPTWSPSGRSL 404
           +    WSP G  +
Sbjct: 468 VYGVDWSPDGLKV 480



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 16/112 (14%), Positives = 35/112 (31%), Gaps = 5/112 (4%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           I R    +      +L+ +FS +G+    S   D  +  + V+ +              +
Sbjct: 118 ITRQSSSLPGHTDSVLSVQFSPDGQNLA-SGSGDTTVRFWDVNTELPKETGKGGHRNWVL 176

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSP 356
              +SP+   +    D  G   + +       Q  ++      +     W P
Sbjct: 177 VIQWSPNGKMLA-SGDMNG--DICLWDPETGKQIGLTMKGHNKWITSISWEP 225


>gi|288927317|ref|ZP_06421164.1| hypothetical protein HMPREF0670_00058 [Prevotella sp. oral taxon
           317 str. F0108]
 gi|288330151|gb|EFC68735.1| hypothetical protein HMPREF0670_00058 [Prevotella sp. oral taxon
           317 str. F0108]
          Length = 306

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/219 (21%), Positives = 76/219 (34%), Gaps = 30/219 (13%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALI---SVQKD--EAMDIYSVDLQSNA------TE 295
               + I          R S +GKR +    S        + + SV+L+S          
Sbjct: 66  TGKAQNITQAAGAGYDARVSPDGKRVVYRENSFTPGHLRMVSLRSVNLESGQHNELVAPT 125

Query: 296 RLTNTLFINISASYSPDSSQIV---FESDREGKEQLYV--------MQSNGSDQKRISQD 344
           R    + +N  A+      Q+    FE     K  + +        +  NG  +      
Sbjct: 126 RSLQGMALNNQAALPVTRGQVAAKGFEGKVSAKNAVVLSINNRQLMISRNGKTRNLSPNG 185

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           KE SY  P  SP G  I +   +   F   V   DGS  + L     ++AP W      +
Sbjct: 186 KEKSYLWPSLSPDGTKILYYVGAEGAF---VCNLDGSNVKPL---GMMRAPQWWDDSTVV 239

Query: 405 IFSRKKDGDT--GSKLYSIDLNGRNETLINTPAYASDPQ 441
               + DG+    S++ + +L G  +TL      A  P+
Sbjct: 240 GMYDQDDGEFVYASRIVATNLKGDKQTLTPDSLIAMYPK 278



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 43/215 (20%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            S + +   + +G+   + +  D    +  +DL +   + +T        A  SPD  ++
Sbjct: 32  PSDVGSKVVAISGQGDFLLLTTDNNSGLTKLDLNTGKAQNITQAAGAGYDARVSPDGKRV 91

Query: 317 VF------------ESDRE-------------GKEQLYVMQSNGSDQKRISQDKEASY-F 350
           V+             S R                  L  M  N      +++ + A+  F
Sbjct: 92  VYRENSFTPGHLRMVSLRSVNLESGQHNELVAPTRSLQGMALNNQAALPVTRGQVAAKGF 151

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFS 407
           +   S +  ++             +M     + R L  +   ++   P+ SP G  +++ 
Sbjct: 152 EGKVSAKNAVVLSINNR------QLMISRNGKTRNLSPNGKEKSYLWPSLSPDGTKILYY 205

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
              +G     L     +G N   +        PQW
Sbjct: 206 VGAEGAFVCNL-----DGSNVKPL---GMMRAPQW 232



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 79/240 (32%), Gaps = 40/240 (16%)

Query: 215 FEPRFSPNQQKVAY--ATYDDEDILRVYL--MDTRIDRAPKRIGNFRSMILAP------- 263
           ++ R SP+ ++V Y   ++    +  V L  ++    +  + +   RS+           
Sbjct: 80  YDARVSPDGKRVVYRENSFTPGHLRMVSLRSVNLESGQHNELVAPTRSLQGMALNNQAAL 139

Query: 264 -----RFSSNG------KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                + ++ G       +  + +  +    + S + ++             +  S SPD
Sbjct: 140 PVTRGQVAAKGFEGKVSAKNAVVLSINNRQLMISRNGKTRNLSPNGKEKSY-LWPSLSPD 198

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF- 371
            ++I++    EG    +V   +GS+ K +          P W     ++        +F 
Sbjct: 199 GTKILYYVGAEGA---FVCNLDGSNVKPL-----GMMRAPQWWDDSTVVGMYDQDDGEFV 250

Query: 372 ---AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               I      G ++ L  +      P  S     + FS         K Y I++    +
Sbjct: 251 YASRIVATNLKGDKQTLTPDSLIAMYPKVSAQAGKIAFST-----PSGKAYIINVTKSQQ 305



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 17/156 (10%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
            I N   ++ R+G         +++    P  SP+  K+ Y    +   +          
Sbjct: 164 SINNRQLMISRNGKTRNLSPNGKEKSYLWPSLSPDGTKILYYVGAEGAFVC-----NLDG 218

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----AMDIYSVDLQSNATERLTNTLFI 303
              K +     M+ AP++  +     +  Q D     A  I + +L+ +    LT    I
Sbjct: 219 SNVKPL----GMMRAPQWWDDSTVVGMYDQDDGEFVYASRIVATNLKGDKQT-LTPDSLI 273

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            +    S  + +I F S   GK   Y++    S Q 
Sbjct: 274 AMYPKVSAQAGKIAF-STPSGKA--YIINVTKSQQP 306


>gi|209550961|ref|YP_002282878.1| hypothetical protein Rleg2_3385 [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209536717|gb|ACI56652.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 329

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 75/203 (36%), Gaps = 21/203 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P   ++A A Y+      V L    ++  P  +  ++       FS +G   + S+Q
Sbjct: 130 AFAPKGLRIAAARYNG-----VSLHWIGMNAKPIDL-EWKGAHTGVTFSPDGNFLVTSMQ 183

Query: 278 KDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++ A+  + +D +  A  R   +T       S S+S     +       G     V    
Sbjct: 184 EN-ALHGWKLDSKPGAEARHMRMTGYPSKVKSLSWSVKGKWLA----SSGAPAAIVWPFQ 238

Query: 335 GSD----QKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           G D    +  +     A+       + P  D++A     G   A+ +     +  R   +
Sbjct: 239 GKDGPMGKAPLELGTRANIMATAVKFHPLEDILAIGFIDGMILAVRIADSKEALLRRPGK 298

Query: 389 DSNLQAPTWSPSGRSLIFSRKKD 411
              + A +WS +G+ L F+ +  
Sbjct: 299 -GAITAMSWSKNGKLLAFASEAG 320



 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 82/248 (33%), Gaps = 29/248 (11%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V    Q     +    +S  ++A   + +  +  T E   F  + L ++ +  +G+    
Sbjct: 92  VAAGPQ-GAIAYSYGKSSLVRLADGTTKEFAEERTVEGLAFAPKGLRIAAARYNGVS--- 147

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK- 251
              +   G N + +            FSP+   +   T   E+ L  + +D++     + 
Sbjct: 148 ---LHWIGMNAKPIDLEWKGAHTGVTFSPDGNFL--VTSMQENALHGWKLDSKPGAEARH 202

Query: 252 -RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-------TERLTNTLFI 303
            R+  + S + +  +S  GK    S     A        Q           E  T    +
Sbjct: 203 MRMTGYPSKVKSLSWSVKGKWLASS----GAPAAIVWPFQGKDGPMGKAPLELGTRANIM 258

Query: 304 NISASYSPDSSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +  + P    +   F         +  ++   S +  + +  + +     WS  G L+
Sbjct: 259 ATAVKFHPLEDILAIGFI-----DGMILAVRIADSKEALLRRPGKGAITAMSWSKNGKLL 313

Query: 362 AFTKFSGE 369
           AF   +G+
Sbjct: 314 AFASEAGD 321


>gi|218528394|ref|YP_002419210.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Methylobacterium chloromethanicum CM4]
 gi|218520697|gb|ACK81282.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Methylobacterium chloromethanicum CM4]
          Length = 626

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 35/103 (33%), Gaps = 4/103 (3%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAP 395
            R       + +    SP G  + +         I     D     + V       + A 
Sbjct: 6   PRAHLFGNPTRYGHQISPDGRRLGWVAPHEGVLNIWSAPIDDLNAAVPVTTDRRRGIDAY 65

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYA 437
            ++  GR L++ +  DGD    LY++DL  G    L   P  A
Sbjct: 66  AFAYDGRHLLYVQDADGDENHHLYAVDLTTGERRDLTPIPGIA 108



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 64/182 (35%), Gaps = 12/182 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNT--LFINISASYSPDSSQIVFESDR 322
           S +G+R       +  ++I+S  +   NA   +T      I+  A ++ D   +++  D 
Sbjct: 22  SPDGRRLGWVAPHEGVLNIWSAPIDDLNAAVPVTTDRRRGIDAYA-FAYDGRHLLYVQDA 80

Query: 323 EG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIGVMK 377
           +G     LY +     +++ ++     +      S       L+A          +  + 
Sbjct: 81  DGDENHHLYAVDLTTGERRDLTPIPGIAAAIVGLSRIVRDRVLVAINDRDPRFHDLHSID 140

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
               +  L++E+       +    R  + F+ +   D  S+L + D       L   P  
Sbjct: 141 LATGERSLVIENPGFAG--FLIDERYAVRFAFRNLPDGSSQLIAPDGANWKPWLTFPPED 198

Query: 437 AS 438
           A 
Sbjct: 199 AR 200


>gi|27377082|ref|NP_768611.1| peptidase [Bradyrhizobium japonicum USDA 110]
 gi|12620665|gb|AAG60941.1|AF322013_60 ID587 [Bradyrhizobium japonicum]
 gi|27350225|dbj|BAC47236.1| blr1971 [Bradyrhizobium japonicum USDA 110]
          Length = 772

 Score = 55.4 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/300 (13%), Positives = 83/300 (27%), Gaps = 65/300 (21%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEP----RFSPNQQKVAYATYDDEDILRVYLMD 243
             K ++ +   DG     LT    +  +      R+SP+ + +A          +++ ++
Sbjct: 187 TTKYNIFLRSEDGLQDIPLTWDGSEGNYYAFSTLRWSPDSRHLAAYRIRPGHKRQIHYIE 246

Query: 244 TRIDRAPKR----IGNFRSMILAP--------------------------RFSS-----N 268
           +      +     +   +     P                            S      +
Sbjct: 247 SSPTDELQPRYSTMTYPKPGDALPLLQPVLFDIIMQSKIEIDNASFPNPYHLSPIKWWKD 306

Query: 269 GKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFI---NISASYSP------------ 311
           G+       +       +  V+  +     L +   I   +                   
Sbjct: 307 GRGFTFEYNQRGHQLYRLVEVEAAAGKVRSLIDERSITFIDYQPLVMDQQKTGKFFRYDV 366

Query: 312 -DSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            D  +I++ S+R+G E LY+      + K +I++            P    I F     +
Sbjct: 367 EDGKEIIWASERDGYEHLYLFDGRTGELKNQITRGDWVVRAVYYVDPVKRQIWFGASGRD 426

Query: 370 K------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI-FSRKKDGDTGSKLYSID 422
           K           +  DG+    L  +       +SP+GR  +    + D      LY   
Sbjct: 427 KGEDPYFVHAYRVDFDGNGLTALTPEPANHHIEFSPNGRYYVDLWSRIDVPPRLALYRAS 486



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 10/85 (11%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------ 395
           +   E    +   SP G  +A+T     K+ I +  +DG Q+  L  D +          
Sbjct: 165 TPPAENDPENTSISPDGKWLAYT----TKYNIFLRSEDGLQDIPLTWDGSEGNYYAFSTL 220

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYS 420
            WSP  R L   R + G      Y 
Sbjct: 221 RWSPDSRHLAAYRIRPGHKRQIHYI 245


>gi|300693280|ref|YP_003749253.1| hypothetical protein RPSI07_mp0258 [Ralstonia solanacearum PSI07]
 gi|299075317|emb|CBJ34611.1| conserved exported protein of unknown function [Ralstonia
           solanacearum PSI07]
          Length = 475

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 50/267 (18%), Positives = 86/267 (32%), Gaps = 23/267 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYD 232
           +  L     V  G   + L + D     +  ++ S   I       FSP+ + +A+    
Sbjct: 44  TGKLAYHSYVSYGDGTSQLFIYDFAARTLTQVSKSTWGIQDPMNAVFSPDGKWLAFMGIT 103

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           + +   V+L        P  + N         P+FS++GK        D      S    
Sbjct: 104 N-NAWNVFLWQVGSSSLPVNMTNSTGQTRNEDPKFSADGKSLFFKQSGDVMQATLSYTST 162

Query: 291 S---NATERLTNT-LFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                +   +TNT   I  S    +PD+S + F +       LY        +       
Sbjct: 163 GPIFTSVVDITNTAPAIESSMPFATPDASAVYFATGSGASMGLYKETIATHTKVAFDTPA 222

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVE---DSNLQAPTWSP 399
               + P+    G  + + ++         I      G     L     +SN   P  +P
Sbjct: 223 GLQTYYPIVRADGT-VFYARWKDATSQADQIYTKVNPGDTPNQLSLNDCNSNNSDP--AP 279

Query: 400 -SGR-SLIFSRKKDGDTGSKLYSIDLN 424
            +G   + FS    G  G +LY  D +
Sbjct: 280 VNGTNYVFFSSTTAG--GYQLYLGDAS 304



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + S  +G  QL++         ++S+         + V+SP G  +AF   +   + + +
Sbjct: 52  YVSYGDGTSQLFIYDFAARTLTQVSKSTWGIQDPMNAVFSPDGKWLAFMGITNNAWNVFL 111

Query: 376 MKKDGS----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +   S            +  + P +S  G+SL F  K+ GD      S    G
Sbjct: 112 WQVGSSSLPVNMTNSTGQTRNEDPKFSADGKSLFF--KQSGDVMQATLSYTSTG 163



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 74/237 (31%), Gaps = 24/237 (10%)

Query: 225 KVAYATY----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           K+AY +Y    D    L +Y    R      +        +   FS +GK        + 
Sbjct: 46  KLAYHSYVSYGDGTSQLFIYDFAARTLTQVSKSTWGIQDPMNAVFSPDGKWLAFMGITNN 105

Query: 281 AMDIYSVDLQSNA-TERLTNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           A +++   + S++    +TN+     N    +S D   + F   + G      +    + 
Sbjct: 106 AWNVFLWQVGSSSLPVNMTNSTGQTRNEDPKFSADGKSLFF--KQSGDVMQATLSYTSTG 163

Query: 338 QKRISQDKEASYFDPVW-------SPQGDLIAFTKFSGEKFAIG--VMKKDGSQERLLVE 388
               +   + +   P         +P    + F   SG    +    +            
Sbjct: 164 PI-FTSVVDITNTAPAIESSMPFATPDASAVYFATGSGASMGLYKETIATHTKVAFDTPA 222

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINT---PAYASDPQ 441
                 P     G  + ++R KD  + + ++Y+    G     ++     +  SDP 
Sbjct: 223 GLQTYYPIVRADGT-VFYARWKDATSQADQIYTKVNPGDTPNQLSLNDCNSNNSDPA 278



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 9/88 (10%), Positives = 27/88 (30%), Gaps = 6/88 (6%)

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +  +      + +          + + +    +     +SP G+ L F    +      L
Sbjct: 52  YVSYGDGTSQLFIYDFAARTLTQVSKSTWGIQDPMNAVFSPDGKWLAFMGITNNAWNVFL 111

Query: 419 YSIDLNGRNETLINTPAYAS--DPQWVG 444
           + +  +     + N+       DP++  
Sbjct: 112 WQVGSSSLPVNMTNSTGQTRNEDPKFSA 139


>gi|299068672|emb|CBJ39909.1| conserved exported protein of unknown function [Ralstonia
           solanacearum CMR15]
          Length = 475

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/268 (17%), Positives = 84/268 (31%), Gaps = 25/268 (9%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYD 232
           +  L     V  G   + L + D     +  ++ S   I       FSP+ + +A+    
Sbjct: 44  TGKLAYHSYVSYGDGTSQLFIYDFAARTLTQVSKSAWGIQDPMNAVFSPDGKWLAFMGIT 103

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           + +   V+L        P  + N         P+FS++GK        D      S    
Sbjct: 104 N-NAWNVFLWQVGSSSQPVNMTNSTGQTRNEDPKFSADGKSLFFKQSGDVMQATLSYTST 162

Query: 291 S---NATERLTNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                +   +TNT     N     +PD S + F +       LY                
Sbjct: 163 GPIFTSVVDITNTAPATENSMPFATPDGSAVYFATGTGANMGLYKETIATHATVAFDTPA 222

Query: 346 EASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLV-----EDSNLQAPTW 397
               + P+    G  + + ++     +   +      G     L       +++  AP  
Sbjct: 223 GLQTYYPIVRADGT-VFYARWKDAASQADQLYTKVNPGDTPNQLSINDCNSNNSDPAPV- 280

Query: 398 SPSGR-SLIFSRKKDGDTGSKLYSIDLN 424
             +G   + FS    G  G +LY  D++
Sbjct: 281 --NGTNYVFFSSTTAG--GYQLYLGDVS 304



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + S  +G  QL++         ++S+         + V+SP G  +AF   +   + + +
Sbjct: 52  YVSYGDGTSQLFIYDFAARTLTQVSKSAWGIQDPMNAVFSPDGKWLAFMGITNNAWNVFL 111

Query: 376 MKKDGS----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +   S            +  + P +S  G+SL F  K+ GD      S    G
Sbjct: 112 WQVGSSSQPVNMTNSTGQTRNEDPKFSADGKSLFF--KQSGDVMQATLSYTSTG 163



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 74/234 (31%), Gaps = 18/234 (7%)

Query: 225 KVAYATY----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           K+AY +Y    D    L +Y    R      +        +   FS +GK        + 
Sbjct: 46  KLAYHSYVSYGDGTSQLFIYDFAARTLTQVSKSAWGIQDPMNAVFSPDGKWLAFMGITNN 105

Query: 281 AMDIYSVDL-QSNATERLTNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNG-- 335
           A +++   +  S+    +TN+     N    +S D   + F+   +  +      S G  
Sbjct: 106 AWNVFLWQVGSSSQPVNMTNSTGQTRNEDPKFSADGKSLFFKQSGDVMQATLSYTSTGPI 165

Query: 336 -SDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSN 391
            +    I+    A+    P  +P G  + F   +G    +                    
Sbjct: 166 FTSVVDITNTAPATENSMPFATPDGSAVYFATGTGANMGLYKETIATHATVAFDTPAGLQ 225

Query: 392 LQAPTWSPSGRSLIFSRKKD-GDTGSKLYSIDLNGRNETLINT---PAYASDPQ 441
              P     G  + ++R KD      +LY+    G     ++     +  SDP 
Sbjct: 226 TYYPIVRADGT-VFYARWKDAASQADQLYTKVNPGDTPNQLSINDCNSNNSDPA 278



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/222 (11%), Positives = 64/222 (28%), Gaps = 11/222 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
                 + +      L  +      +     +      +P+FS + + + +      D++
Sbjct: 96  WLAFMGITNNAWNVFLWQVGSSSQPVNMTNSTGQTRNEDPKFSADGKSLFF--KQSGDVM 153

Query: 238 RVYLMDTRIDRAPKRI-----GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           +  L  T        +         +    P  + +G     +      M +Y   + ++
Sbjct: 154 QATLSYTSTGPIFTSVVDITNTAPATENSMPFATPDGSAVYFATGTGANMGLYKETIATH 213

Query: 293 ATERLTNTLFINI-SASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRIS-QDKEAS 348
           AT        +         D +             +QLY   + G    ++S  D  ++
Sbjct: 214 ATVAFDTPAGLQTYYPIVRADGTVFYARWKDAASQADQLYTKVNPGDTPNQLSINDCNSN 273

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             DP      + + F+  +   + + +      Q   L +  
Sbjct: 274 NSDPAPVNGTNYVFFSSTTAGGYQLYLGDVSTGQRWSLSQFG 315



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 9/88 (10%), Positives = 28/88 (31%), Gaps = 6/88 (6%)

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +  +      + +          + + +    +     +SP G+ L F    +      L
Sbjct: 52  YVSYGDGTSQLFIYDFAARTLTQVSKSAWGIQDPMNAVFSPDGKWLAFMGITNNAWNVFL 111

Query: 419 YSIDLNGRNETLINTPAYAS--DPQWVG 444
           + +  + +   + N+       DP++  
Sbjct: 112 WQVGSSSQPVNMTNSTGQTRNEDPKFSA 139


>gi|150009679|ref|YP_001304422.1| dipeptidyl peptidase IV [Parabacteroides distasonis ATCC 8503]
 gi|149938103|gb|ABR44800.1| dipeptidyl peptidase IV [Parabacteroides distasonis ATCC 8503]
          Length = 733

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 46/322 (14%), Positives = 101/322 (31%), Gaps = 82/322 (25%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDEDIL 237
           N++ ++  DG N      ++D I+                 +SP    +A+   D+  + 
Sbjct: 160 NNVHILSPDGRNTIVTRETQDGIVCGQAVHQREFGITKGMFWSPKGSALAFYRMDERMVT 219

Query: 238 RVYLMDTRI--------------------DRAPKRIGNFRSMILA---P--------RFS 266
              L++                            ++   +++ L    P         +S
Sbjct: 220 AYPLVNIDTRCATPVPHKYPMAGMKSHEVTVGVYQVATGQTVWLETGLPKEKYLTNIAWS 279

Query: 267 SNGKRALISVQKDEAMDIYSVD---LQSNATERL-TNTLFINISAS----YSP-DSSQIV 317
            + K   I+    E  +++ V    L       L T T    +       + P D  + +
Sbjct: 280 PDEKSIYIAELNREQNEMHLVRYSALTGKKEADLFTETDRCYVEPQHPVLFLPNDPDKFI 339

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---------KFSG 368
           ++S+ +G   LY+  + G + ++++  +        +S  G+ + F             G
Sbjct: 340 WQSEADGYNHLYLYDTTGKELRKLTGGEWVVTKVLGFSKDGNKVIFEGTAPHPVSPNMQG 399

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTW---------SPSGRS-LIFSRKKDGDTGSKL 418
                 + + D      L     +   +W         SPSG   + +           L
Sbjct: 400 TGMQRYIWETD------LRTGDIMNCLSWKVGVHRWLLSPSGEYAIDYVSSPSTPRDIDL 453

Query: 419 YSIDLNGRNETLINTPAYASDP 440
             +    ++  +I+T   A DP
Sbjct: 454 IRV----KDAKVISTLLSAPDP 471


>gi|113476963|ref|YP_723024.1| YD repeat-containing protein [Trichodesmium erythraeum IMS101]
 gi|110168011|gb|ABG52551.1| YD repeat protein [Trichodesmium erythraeum IMS101]
          Length = 3193

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/289 (14%), Positives = 106/289 (36%), Gaps = 38/289 (13%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPR----FSPNQ--QKVAYATYDDEDILRVYL 241
               N + +M+ DG   + + P      ++      F+ +     +           R++L
Sbjct: 2904 NGPNRIWLMNDDGTRNQTVNPGSFGSAWDVAGVADFNTDGVADILWRHQSHKNGPNRIWL 2963

Query: 242  MDTRIDRAPKR-IGNFRS---MILAPRFSSNG-KRALISVQ--KDEAMDIYSVDLQSNAT 294
            M+    R      GNF S   +     F+++G    L   Q  K+    I+ ++      
Sbjct: 2964 MNDDGTRNQTVNPGNFHSAWDVAGVADFNTDGVDDILWRHQSHKNGPNRIWLMNDDGTRN 3023

Query: 295  ERL---TNTLFINIS--ASYSPDS-SQIVF--ESDREGKEQLYVMQSNGSDQKRISQDKE 346
            + +   +     +++  A ++ D    I++  +S   G+ ++++M  +G+  + +     
Sbjct: 3024 QTVNPGSFRSAWDVAGVADFNADGVDDILWRHQSHNNGQNRIWLMNDDGTRNQTVHPGIL 3083

Query: 347  ASYFDPV----WSPQG-DLIAFTKFS--GEKFAIGVMKKDGSQERLLVED--SNLQAPT- 396
               +D      ++  G D I +   S    +  I +M  DG++ + +             
Sbjct: 3084 GLAWDVAGVADFNADGVDDILWRHQSHNNGQNRIWLMNDDGTRNQTVHPGILGLAWDVAG 3143

Query: 397  ---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
               ++  G  +     +D    ++++ ++ +G     +N   + S   W
Sbjct: 3144 VADFNTDG--VADIHWRDQSGANRIWLMNDDGTPNQTVNPGGFGS--AW 3188



 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 74/176 (42%), Gaps = 23/176 (13%)

Query: 278  KDEAMDIYSVDLQSNATERL---TNTLFINIS--ASYSPDSSQIVF---ESDREGKEQLY 329
            K+    I+ ++      + +   +     +++  A ++ D    +    +S + G  +++
Sbjct: 2903 KNGPNRIWLMNDDGTRNQTVNPGSFGSAWDVAGVADFNTDGVADILWRHQSHKNGPNRIW 2962

Query: 330  VMQSNGSDQKRISQDKEASYFDPV----WSPQG-DLIAFTKFS--GEKFAIGVMKKDGSQ 382
            +M  +G+  + ++     S +D      ++  G D I +   S       I +M  DG++
Sbjct: 2963 LMNDDGTRNQTVNPGNFHSAWDVAGVADFNTDGVDDILWRHQSHKNGPNRIWLMNDDGTR 3022

Query: 383  ERLLVEDSNLQAP------TWSPSG-RSLIFSRKKDGDTGSKLYSIDLNG-RNETL 430
             + +   S   A        ++  G   +++  +   +  ++++ ++ +G RN+T+
Sbjct: 3023 NQTVNPGSFRSAWDVAGVADFNADGVDDILWRHQSHNNGQNRIWLMNDDGTRNQTV 3078



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 69/186 (37%), Gaps = 22/186 (11%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPR----FSPNQ--QKVAYATYDDEDILRVYL 241
               N + +M+ DG   + + P   +  ++      F+ +     +      +    R++L
Sbjct: 3008 NGPNRIWLMNDDGTRNQTVNPGSFRSAWDVAGVADFNADGVDDILWRHQSHNNGQNRIWL 3067

Query: 242  MDTRIDR----APKRIGNFRSMILAPRFSSNG-KRALISVQ--KDEAMDIYSVDLQSNAT 294
            M+    R     P  +G    +     F+++G    L   Q   +    I+ ++      
Sbjct: 3068 MNDDGTRNQTVHPGILGLAWDVAGVADFNADGVDDILWRHQSHNNGQNRIWLMNDDGTRN 3127

Query: 295  ERLTNTLFI-----NIS--ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +  T    I     +++  A ++ D    +   D+ G  ++++M  +G+  + ++     
Sbjct: 3128 Q--TVHPGILGLAWDVAGVADFNTDGVADIHWRDQSGANRIWLMNDDGTPNQTVNPGGFG 3185

Query: 348  SYFDPV 353
            S +D  
Sbjct: 3186 SAWDVA 3191



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/138 (14%), Positives = 52/138 (37%), Gaps = 18/138 (13%)

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDL-IAFTKFS--GEKFA 372
            S + G  ++++M  +G+  + ++     S +D      ++  G   I +   S       
Sbjct: 2901 SHKNGPNRIWLMNDDGTRNQTVNPGSFGSAWDVAGVADFNTDGVADILWRHQSHKNGPNR 2960

Query: 373  IGVMKKDGSQERLLVEDSNLQAPT-------WSPSG-RSLIFSRKKDGDTGSKLYSIDLN 424
            I +M  DG+     V   N  +         ++  G   +++  +   +  ++++ ++ +
Sbjct: 2961 IWLMNDDGT-RNQTVNPGNFHSAWDVAGVADFNTDGVDDILWRHQSHKNGPNRIWLMNDD 3019

Query: 425  GRNETLINTPAYASDPQW 442
            G     +N P       W
Sbjct: 3020 GTRNQTVN-PGSFRS-AW 3035


>gi|297792623|ref|XP_002864196.1| hypothetical protein ARALYDRAFT_918330 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310031|gb|EFH40455.1| hypothetical protein ARALYDRAFT_918330 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 472

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 13/153 (8%)

Query: 182 ESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    ++ + +       +       Q++    FSP+ + +A A++D      V 
Sbjct: 329 ERLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDK----SVR 384

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L +    +           +    +S++  R L+S  KD  + I+ +  ++   ++    
Sbjct: 385 LWNGITGQFVTTFRGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEI--RTKKLKQDLPG 441

Query: 301 LFINISAS-YSPDSSQIVFESDREGKEQLYVMQ 332
               + A  +SPD  ++V      GK+++  + 
Sbjct: 442 HSDEVFAVDWSPDGEKVV----SGGKDRVLKLW 470



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 47/147 (31%), Gaps = 7/147 (4%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++   +     +RLT    +     +SPD   I   S     + + +  
Sbjct: 331 LVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASF---DKSVRLWN 387

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +      +   WS    L+  +        I  ++    ++ L      +
Sbjct: 388 GITGQFVTTFRGHVGPVYQVSWSADSRLLL-SGSKDSTLKIWEIRTKKLKQDLPGHSDEV 446

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            A  WSP G  ++       D   KL+
Sbjct: 447 FAVDWSPDGEKVV---SGGKDRVLKLW 470



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 15/119 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ +++A  + D      V L D   +         ++ +L   +S +GK  + S  
Sbjct: 115 SFSPDGKQLASGSGDT----TVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLV-SGS 169

Query: 278 KDEAMDIYSVDLQSNATE--RLTNTLFINISASYSP-----DSSQIVFESDREGKEQLY 329
           K   +  +  + +    E   LT         S+ P        + V  S ++G  +++
Sbjct: 170 KSGEICCW--NPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFV-TSSKDGDARIW 225



 Score = 43.1 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 24/177 (13%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLF 302
           ++R  + I      +L   FS +GK+   S   D  + ++  DL +     L        
Sbjct: 97  VNRCSQTIAGHAEAVLCVSFSPDGKQLA-SGSGDTTVRLW--DLYT--ETPLFTCKGHKN 151

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVW------ 354
             ++ ++SPD   +V  S      ++        + +   ++  K+       W      
Sbjct: 152 WVLTVAWSPDGKHLVSGSKSG---EICCWNPKKGELEGSPLTGHKKW-ITGISWEPVHLS 207

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           SP    +  T        I  +    S   L      +    W   G  +I++  +D
Sbjct: 208 SPCRRFV--TSSKDGDARIWDITLKKSIICLSGHTLAVTCVQWGGDG--IIYTGSQD 260


>gi|290988886|ref|XP_002677117.1| hypothetical protein NAEGRDRAFT_33676 [Naegleria gruberi]
 gi|284090723|gb|EFC44373.1| hypothetical protein NAEGRDRAFT_33676 [Naegleria gruberi]
          Length = 289

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 84/244 (34%), Gaps = 21/244 (8%)

Query: 163 YQSITGEKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           Y+    EKG              V +G    ++ +          +       +    FS
Sbjct: 58  YKYQQHEKGGVMCVEFSPLTGKLVATGGKDKTIRLWQPTIEGKSTIIRGHTNTVRSVHFS 117

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + +++  ++ D      + L      +  +      + + A  FS + +R ++S   D+
Sbjct: 118 MDGKRLLSSSDDK----TIKLWSISNQQFIQVFSGHSNWVRATDFSPD-ERLIVSGSDDK 172

Query: 281 AMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + ++  D++SN     L           +SPD + +V  S  +   +++ ++      +
Sbjct: 173 TVRLW--DIKSNKCIMSLVEHTDNVNDVHFSPDGNCLVSCS-VDKTVKVWDVRLAKKLLQ 229

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---- 395
             +   E       + P G+ I     + +   I     D  + RL    S   AP    
Sbjct: 230 HFT-GHEDIVNQVSYHPSGNYIISCS-TDQTMKIW----DTREGRLFYTISGHAAPTTAV 283

Query: 396 TWSP 399
           T+SP
Sbjct: 284 TFSP 287



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 70/189 (37%), Gaps = 12/189 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP   K+            + L    I+     I    + + +  FS +GKR L S   
Sbjct: 73  FSPLTGKLVAT---GGKDKTIRLWQPTIEGKSTIIRGHTNTVRSVHFSMDGKRLL-SSSD 128

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D+ + ++S+   +    ++ +     + A+ +SPD   IV  SD    + + +     + 
Sbjct: 129 DKTIKLWSI--SNQQFIQVFSGHSNWVRATDFSPDERLIVSGSD---DKTVRLWDIKSNK 183

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPT 396
                 +   +  D  +SP G+ +       +   +  ++      +      + +   +
Sbjct: 184 CIMSLVEHTDNVNDVHFSPDGNCLVSCSVD-KTVKVWDVRLAKKLLQHFTGHEDIVNQVS 242

Query: 397 WSPSGRSLI 405
           + PSG  +I
Sbjct: 243 YHPSGNYII 251


>gi|217957738|ref|YP_002336282.1| putative prolyl oligopeptidase family protein [Bacillus cereus
           AH187]
 gi|229137011|ref|ZP_04265637.1| Acylamino-acid-releasing enzyme [Bacillus cereus BDRD-ST26]
 gi|217067172|gb|ACJ81422.1| putative prolyl oligopeptidase family protein [Bacillus cereus
           AH187]
 gi|228646422|gb|EEL02630.1| Acylamino-acid-releasing enzyme [Bacillus cereus BDRD-ST26]
          Length = 652

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 53/339 (15%), Positives = 114/339 (33%), Gaps = 64/339 (18%)

Query: 143 KFFSSPASWRKIAHTISDDIYQS-------ITGEKGDFNSRILFVSES-----VVSGIIK 190
            F    A+W+   +     IY+        +T    D    +   +          G  K
Sbjct: 33  AFVKRTANWKDNTYRNHVWIYEKGKGKNYPLTNGDIDSTCPLWSPNSRDIAYLSPGGNGK 92

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------------DDEDILR 238
           N + V   DG +   +T   + I    ++    +   Y                  D   
Sbjct: 93  NQIFVKSLDGYSGVQITDEEEGISTF-KWDHTGKGFYYIAQAKECEEIKKRKERYGDFHH 151

Query: 239 V-------------YLMDTRIDRAPKRIGNFRSMILAPRF-------SSNGKRALI---- 274
           V                  + D+  + I     +     F       S++GK+ +     
Sbjct: 152 VGKEHQNNCLCYVEIEKVIQNDKEEREINGVYQLTDGKDFYIHDFDISNDGKKVVCMATP 211

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKE------- 326
           S+      DIY +D+++   +++     +  S  +SP+ ++I +  S RE +        
Sbjct: 212 SLNDYMNGDIYILDVEAEELQKMNVDRLLGGSVCFSPEGNKICYSASIREKEYYRNHIQE 271

Query: 327 -QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             L +   N  +  +   + +++     W  +G  I         + IG++ +DG+ E +
Sbjct: 272 STLEIYDMNTGEVLQPLTNFDSTVMPLQWIAKG--ILIRWQDKTNYRIGLLAEDGTME-V 328

Query: 386 LVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           L +  D  +   + +  G  + +S+    +T  ++Y  D
Sbjct: 329 LSDNVDGFIMDASITKDGNHITYSKAITNET-FEIYLDD 366



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 82/281 (29%), Gaps = 56/281 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     + N       P +S N +   
Sbjct: 24  NISDDGKNVAFVKRTANWKDNTYRNHVWIYEKGKGKNYPLTNGDIDSTCPLWSPNSRDIA 83

Query: 274 I-SVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFES----------- 320
             S   +    I+   L   +  ++T+    I+    +        + +           
Sbjct: 84  YLSPGGNGKNQIFVKSLDGYSGVQITDEEEGISTF-KWDHTGKGFYYIAQAKECEEIKKR 142

Query: 321 -DREGKEQ---------------LYVMQSNGSDQK------RISQDKEASYFDPVWSPQG 358
            +R G                  +  +  N  +++      +++  K+    D   S  G
Sbjct: 143 KERYGDFHHVGKEHQNNCLCYVEIEKVIQNDKEEREINGVYQLTDGKDFYIHDFDISNDG 202

Query: 359 DLIA-FTKFSGEKF---AIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS------ 407
             +      S   +    I ++  +  + + + V+     +  +SP G  + +S      
Sbjct: 203 KKVVCMATPSLNDYMNGDIYILDVEAEELQKMNVDRLLGGSVCFSPEGNKICYSASIREK 262

Query: 408 ---RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
              R    ++  ++Y ++  G     +        P QW+ 
Sbjct: 263 EYYRNHIQESTLEIYDMN-TGEVLQPLTNFDSTVMPLQWIA 302



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 42/112 (37%), Gaps = 9/112 (8%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++ +        ++ + +     P+WSP   
Sbjct: 22  STNISDDGKNVAFVKRTANWKDNTYRNHVWIYEKGKGKNYPLT-NGDIDSTCPLWSPNSR 80

Query: 360 LIAFTKFSG-EKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            IA+    G  K  I V   DG S  ++  E+  +    W  +G+   +  +
Sbjct: 81  DIAYLSPGGNGKNQIFVKSLDGYSGVQITDEEEGISTFKWDHTGKGFYYIAQ 132


>gi|302866268|ref|YP_003834905.1| WD40 repeat, subgroup [Micromonospora aurantiaca ATCC 27029]
 gi|302569127|gb|ADL45329.1| WD40 repeat, subgroup [Micromonospora aurantiaca ATCC 27029]
          Length = 576

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 56/201 (27%), Gaps = 9/201 (4%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E   ++  I   +  V++     ++ V D DG  +          +     S + +   
Sbjct: 277 HEGSIWSVAIDSAARVVLTASSDGTVGVWDVDGGRLLRTLVGHRGWVNAVALSGDGR--- 333

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                      V + D    R  + +   R  + A   S +G R  +S   D  + ++ V
Sbjct: 334 -VAVSGSSDGTVRVWDVDGGRLLRTLVGHRGWVNAVALSGDG-RVAVSGSSDGTVRVWDV 391

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D        L        + + S D    V  S       + V   +G    R       
Sbjct: 392 D-GGRLLRTLVGHRGWVNAVALSGDGRVAVSGSS---DGTVRVWDVDGGRLLRTLTGHPM 447

Query: 348 SYFDPVWSPQGDLIAFTKFSG 368
           +            +    + G
Sbjct: 448 AVTSVYLGSDQRSVLSAGYDG 468



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 56/169 (33%), Gaps = 7/169 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    ++ V D DG  +          +     S + +              V + D 
Sbjct: 336 VSGSSDGTVRVWDVDGGRLLRTLVGHRGWVNAVALSGDGR----VAVSGSSDGTVRVWDV 391

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R  + +   R  + A   S +G R  +S   D  + ++ VD        LT      
Sbjct: 392 DGGRLLRTLVGHRGWVNAVALSGDG-RVAVSGSSDGTVRVWDVD-GGRLLRTLTGHPMAV 449

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            S     D  + V  +  +G  + + + S+ +  + + + +E  +    
Sbjct: 450 TSVYLGSD-QRSVLSAGYDGLVRSWDLASSRTGPRVLGRHRERIWMVSA 497


>gi|301768617|ref|XP_002919724.1| PREDICTED: WD repeat and SOCS box-containing protein 2-like
           [Ailuropoda melanoleuca]
          Length = 406

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 75/199 (37%), Gaps = 21/199 (10%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           ++ + + +       +   + ++    F+ +G   L+S  +D+ + I+ ++      + L
Sbjct: 136 QIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVL 195

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +  L      S SPD S +       G++ +++         R  +  ++S     +SP 
Sbjct: 196 SGHLQWVYCCSVSPDCSMLC---SAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPD 252

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-------------SNLQAPTWSPSGRSL 404
             L+    +      I      G + R L                S+L++  +SP G   
Sbjct: 253 SALLVTASYDTN--VIMWDPYTGERLRFLHHTQLDPPMDDSDVHISSLRSVCFSPEG--- 307

Query: 405 IFSRKKDGDTGSKLYSIDL 423
           ++      D   ++++++L
Sbjct: 308 LYLATVADDRLLRIWALEL 326



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 72/247 (29%), Gaps = 41/247 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 18  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKN 77

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKR---------------ALISVQKDEAM 282
           DT+   +PK            +  +P  S   ++                L +   D  +
Sbjct: 78  DTKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDISCLILATGLNDGQI 137

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 138 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 196

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 197 -GHLQWVYCCSVSPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 254

Query: 403 SLIFSRK 409
            L+ +  
Sbjct: 255 LLVTASY 261


>gi|168988942|pdb|3C5M|A Chain A, Crystal Structure Of Oligogalacturonate Lyase (Vpa0088)
           From Vibrio Parahaemolyticus. Northeast Structural
           Genomics Consortium Target Vpr199
 gi|168988943|pdb|3C5M|B Chain B, Crystal Structure Of Oligogalacturonate Lyase (Vpa0088)
           From Vibrio Parahaemolyticus. Northeast Structural
           Genomics Consortium Target Vpr199
 gi|168988944|pdb|3C5M|C Chain C, Crystal Structure Of Oligogalacturonate Lyase (Vpa0088)
           From Vibrio Parahaemolyticus. Northeast Structural
           Genomics Consortium Target Vpr199
          Length = 396

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 64/191 (33%), Gaps = 28/191 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYAT 230
            F+   +         ++     +++ DG+N+R +    +        + P+    AY +
Sbjct: 197 PFDDSTVGFCHEGPHDLVDARXWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAXAYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-------------LISV 276
           Y      R +Y  +       +         L   F  +G                  S 
Sbjct: 257 YFKGQTDRVIYKANPETLENEEVXVXPPCSHLXSNF--DGSLXVGDGCDAPVDVADADSY 314

Query: 277 QKDEAMDIYSVDLQSNATERL----TNTLFINIS-------ASYSPDSSQIVFESDREGK 325
             +    +Y ++ ++ + ++L    T+   ++          S++P+   ++F SD EG 
Sbjct: 315 NIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGV 374

Query: 326 EQLYVMQSNGS 336
             +Y+     S
Sbjct: 375 PAIYIADVPES 385



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 65/192 (33%), Gaps = 28/192 (14%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDRE 323
           F+ +GK+ L +   D   + Y ++L++    +LT     N    + S D     +  +  
Sbjct: 43  FTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNEL 102

Query: 324 GKEQLYVMQSNGSDQKRIS-----QDKEASYFDPV--------------WSPQGDLIAFT 364
               L  +     +++ I           ++                  W P      F 
Sbjct: 103 ---NLXKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFA 159

Query: 365 KFSGEKFAIGVMKKD--GSQERLLVEDSNL-QAPTWSP-SGRSLIFSRKKDGDT-GSKLY 419
           +F        ++K D    +  ++ +D+     P + P    ++ F  +   D   ++ +
Sbjct: 160 EFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARXW 219

Query: 420 SIDLNGRNETLI 431
            ++ +G N   I
Sbjct: 220 LVNEDGSNVRKI 231



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 88/261 (33%), Gaps = 39/261 (14%)

Query: 196 MDRDGANIRYLTPSRDQIL-----FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           +D D           D I      ++  F+ + +K+ +A  D +     YL++    +A 
Sbjct: 15  VDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAG-DFDGNRNYYLLNLETQQAV 73

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASY 309
           +              S++ +RA   V+ +  +++  VDL++   + + T         ++
Sbjct: 74  QLTEGKGDNTFGGFISTD-ERAFFYVKNE--LNLXKVDLETLEEQVIYTVDEEWKGYGTW 130

Query: 310 --SPDSSQIV-----------------FESDREGKE--QLYVMQSNGSDQKRISQDKEAS 348
             + D +++V                 F          +L  +     + + I QD  A 
Sbjct: 131 VANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDT-AW 189

Query: 349 YFDPVWSP-QGDLIAFTKFSGEKF---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSG 401
              P++ P     + F              ++ +DGS  R +    E  +     W P G
Sbjct: 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARXWLVNEDGSNVRKIKEHAEGESCTHEFWIPDG 249

Query: 402 RSLIFSRKKDGDTGSKLYSID 422
            +  +     G T   +Y  +
Sbjct: 250 SAXAYVSYFKGQTDRVIYKAN 270


>gi|158522436|ref|YP_001530306.1| hypothetical protein Dole_2425 [Desulfococcus oleovorans Hxd3]
 gi|158511262|gb|ABW68229.1| hypothetical protein Dole_2425 [Desulfococcus oleovorans Hxd3]
          Length = 556

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/280 (16%), Positives = 95/280 (33%), Gaps = 38/280 (13%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE----PRFSPNQQKVAYA 229
           + ++   S  +       +    + DG  +R        + +E    PRF P   KVAY 
Sbjct: 44  DEQVFAGSVQLSDDRQHITYVSKNHDGK-VRVWIDGITGVAYEGTSTPRFVPGTGKVAYI 102

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
             D+ ++  +  ++        R  +         FS +G R     Q ++   +  VD 
Sbjct: 103 AADNGNMFTI--INGEKGPKNARADSL-------TFSPDGSRFGYRAQNNDGKVLAVVD- 152

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                  L   +  +    +SPDS   ++    E   Q+ V      +  R   +     
Sbjct: 153 --GKPGPLFVNVLPDPGILFSPDSRHAIYIGVNEAGSQVLVKNH---EPLRAFDE----I 203

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            +  +SP    +A+   SG+ ++  V+  D   +       N+    +S     L +  +
Sbjct: 204 KEVAFSPDSRHLAYAGRSGQDWS--VIHNDTENDPY----DNINGVLFSSDSSHLAYMAE 257

Query: 410 KDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVGFM 446
           K          +  +G+ +        P ++ D    GF+
Sbjct: 258 KGRR-----VVVVKDGKEQFSGESAGIPFFSPDGTRFGFL 292



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 44/128 (34%), Gaps = 12/128 (9%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVY------LMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           P F P Q  +A+   D +D+  V          T      +  G+       P FS +G 
Sbjct: 393 PVFPPGQDAIAHVAQDGKDMFFVMGEKKEGPYRTIGIPRTQADGSVAMTSQFPFFSPDGA 452

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R        +      VD +S+          I     +SPDS  + + + + GK  + V
Sbjct: 453 RVAYPAIDHDNRIFMVVDGKSHE-----YYEAI-TEPVFSPDSGHVAYTAQKNGKWLVVV 506

Query: 331 MQSNGSDQ 338
               G  +
Sbjct: 507 DGIEGEKR 514



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 64/193 (33%), Gaps = 35/193 (18%)

Query: 219 FSPNQQKVAY--ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           FSP+ +   Y         +L       R     K +           FS + +    + 
Sbjct: 170 FSPDSRHAIYIGVNEAGSQVLVKNHEPLRAFDEIKEV----------AFSPDSRHLAYAG 219

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNG 335
           +  +   +   D +        N  + NI+   +S DSS + + +++  +    V+  +G
Sbjct: 220 RSGQDWSVIHNDTE--------NDPYDNINGVLFSSDSSHLAYMAEKGRR---VVVVKDG 268

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            +Q         S   P +SP G    F    G+ + + + +K G         +     
Sbjct: 269 KEQ-----FSGESAGIPFFSPDGTRFGFLMKKGKGWHLMMDEKKGPLI------ARPDKV 317

Query: 396 TWSPSGRSLIFSR 408
            +S   R   +S 
Sbjct: 318 VFSEDSRHFAYSA 330



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 69/212 (32%), Gaps = 31/212 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS + +  AY+      I   + +    +   K +   R +   P  S +    L     
Sbjct: 319 FSEDSRHFAYSAL----IGTTWAVIKDTEIVDKGLQRIRFLTFLPD-SPD---LLYIAVP 370

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM------Q 332
               +   V+      ++ ++   I +   + P    I   +  +GK+  +VM       
Sbjct: 371 QAGKEYMMVNG-----QKYSSFDSIGL-PVFPPGQDAIAHVAQ-DGKDMFFVMGEKKEGP 423

Query: 333 SNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                  R   D   +     P +SP G  +A+     +     V+     +    +   
Sbjct: 424 YRTIGIPRTQADGSVAMTSQFPFFSPDGARVAYPAIDHDNRIFMVVDGKSHEYYEAIT-- 481

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               P +SP    + ++ +K+G     L  +D
Sbjct: 482 ---EPVFSPDSGHVAYTAQKNGKW---LVVVD 507



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 24/107 (22%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P FSP+  +VAY   D ++ +   ++D +     + I         P FS +      +
Sbjct: 444 FPFFSPDGARVAYPAIDHDNRIF-MVVDGKSHEYYEAITE-------PVFSPDSGHVAYT 495

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP--DSSQIVFES 320
            QK+    +  VD              I     +      S+IVF+S
Sbjct: 496 AQKNG-KWLVVVD-------------GIEGEKRFDGILKGSRIVFDS 528



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 64/171 (37%), Gaps = 23/171 (13%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDR-----APKRIGNFRSMILAPRFSSNGKRALISVQK 278
           Q++ + T+  +    +Y+   +  +       ++  +F S+ L P F   G+ A+  V +
Sbjct: 350 QRIRFLTFLPDSPDLLYIAVPQAGKEYMMVNGQKYSSFDSIGL-PVFPP-GQDAIAHVAQ 407

Query: 279 DEAMDIYSVDLQSNATER-----LTNTLF----INISASYSPDSSQIVFESDREGKEQLY 329
           D     + +  +     R      T         +    +SPD +++ + +         
Sbjct: 408 DGKDMFFVMGEKKEGPYRTIGIPRTQADGSVAMTSQFPFFSPDGARVAYPAIDHDNRIFM 467

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           V+          S +   +  +PV+SP    +A+T     K+ + V   +G
Sbjct: 468 VVDGK-------SHEYYEAITEPVFSPDSGHVAYTAQKNGKWLVVVDGIEG 511


>gi|145515134|ref|XP_001443469.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124410853|emb|CAK76072.1| unnamed protein product [Paramecium tetraurelia]
          Length = 515

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 68/202 (33%), Gaps = 22/202 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + + +  FS + + +   + D+     + L D R  +  + +   ++ + +  FS
Sbjct: 218 LNGHSESVNQVAFSSDGKSLVSCSNDN----SICLWDIRRAK-VQCLNRKKNQVQSVCFS 272

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINI--SASYSPDSSQIVFESDRE 323
            N    +  +        +         ++++      +   S  +SPD + +     R 
Sbjct: 273 PNYAILVYCI------GCFIYIWNYKREKQISKLHSKTDFVKSICFSPDGATLASAGIRL 326

Query: 324 ---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              G   +++       Q+              +SP G+ IA        ++I +     
Sbjct: 327 CGVGGNYIHLWNVKTGQQQAELGGHSQCIMSVCFSPDGNTIASGSQD---YSIYLWDVKT 383

Query: 381 SQER--LLVEDSNLQAPTWSPS 400
            Q++  L    + +   ++SP 
Sbjct: 384 GQQKANLGGHSNFINQLSFSPD 405



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 42/123 (34%), Gaps = 6/123 (4%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD--DEDILRVYLMDTRIDRAP 250
           + + +           S+   +    FSP+   +A A           ++L + +  +  
Sbjct: 286 IYIWNYKREKQISKLHSKTDFVKSICFSPDGATLASAGIRLCGVGGNYIHLWNVKTGQQQ 345

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASY 309
             +G     I++  FS +G          +   IY  D+++   +  L          S+
Sbjct: 346 AELGGHSQCIMSVCFSPDGNTIA---SGSQDYSIYLWDVKTGQQKANLGGHSNFINQLSF 402

Query: 310 SPD 312
           SPD
Sbjct: 403 SPD 405



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 67/174 (38%), Gaps = 23/174 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FSS+GK  + S   D ++ ++  D++    + L        S  +SP+ + +V+     
Sbjct: 229 AFSSDGKSLV-SCSNDNSICLW--DIRRAKVQCLNRKKNQVQSVCFSPNYAILVYCI--- 282

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFS----GEKFAIGVMK 377
               +Y+       +K+IS+    + F     +SP G  +A         G  + I +  
Sbjct: 283 -GCFIYIWNY--KREKQISKLHSKTDFVKSICFSPDGATLASAGIRLCGVGGNY-IHLWN 338

Query: 378 KDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
               Q++  +   +  + +  +SP G ++       G     +Y  D+    + 
Sbjct: 339 VKTGQQQAELGGHSQCIMSVCFSPDGNTIA-----SGSQDYSIYLWDVKTGQQK 387



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 4/82 (4%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N + + +      +       Q +    FSP+   +A  + D      +YL D + 
Sbjct: 328 GVGGNYIHLWNVKTGQQQAELGGHSQCIMSVCFSPDGNTIASGSQD----YSIYLWDVKT 383

Query: 247 DRAPKRIGNFRSMILAPRFSSN 268
            +    +G   + I    FS +
Sbjct: 384 GQQKANLGGHSNFINQLSFSPD 405


>gi|78049692|ref|YP_365867.1| putative dipeptidyl peptidase IV [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78038122|emb|CAJ25867.1| putative dipeptidyl peptidase IV [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 745

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 69/210 (32%), Gaps = 55/210 (26%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-------------------- 246
            P     L +P+ +P+  +V +    D D  ++ L +  I                    
Sbjct: 32  LPLSGPTLMKPKVAPDGSRVTFLRGKDNDRNQLDLWEYDIASGQTRLLVDSKVVLPGTEV 91

Query: 247 -------DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ER 296
                   R  +RI  F  ++   +++ +    L  +      ++Y  DL+        +
Sbjct: 92  LSDVEKARRERQRIAAFTGIVDY-QWAPDAHALLFPL----GGELYLYDLRKTGAAAVRK 146

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--- 353
           LT+       A  SP    + F  +R     ++V++    +  +++ D   +  + V   
Sbjct: 147 LTHGEGFATDAKLSPKGGFVSFVRER----NVWVIELANGNALQLTHDGSETIGNGVAEF 202

Query: 354 -------------WSPQGDLIAFTKFSGEK 370
                        W+P    IAF +    +
Sbjct: 203 VADEEMDRHTGYWWAPDDSAIAFARIDESQ 232



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/320 (11%), Positives = 88/320 (27%), Gaps = 111/320 (34%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+   + +        L +Y +      A +++ +        + S  G       ++
Sbjct: 116 WAPDAHALLFP---LGGELYLYDLRKTGAAAVRKLTHGEGFATDAKLSPKGGFVSFVRER 172

Query: 279 DEAMDIYSVDLQSNATERLTNTLFI-----------------NISASYSPDSSQIVFE-- 319
           +    ++ ++L +    +LT+                     +    ++PD S I F   
Sbjct: 173 N----VWVIELANGNALQLTHDGSETIGNGVAEFVADEEMDRHTGYWWAPDDSAIAFARI 228

Query: 320 ---------------------SDR-----------------------------EGKEQLY 329
                                S R                                  +Y
Sbjct: 229 DESQVPVQKRPEVYADHTEVISQRYPQAGQPNVAVQLGVIAPRAKATPRWIDLGKNPDIY 288

Query: 330 VMQSNGSDQKRISQDKEASY----------------------FDPVWSP---------QG 358
           + + +  D +R++  +++                          P W P          G
Sbjct: 289 LARVDWRDAQRLTFQRQSRDQKTLELIETTLASGVQRTLVTETSPTWVPLSNDLRFLKDG 348

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDTGS 416
             + +         + +  +DG     L   + +     +   ++  + F+  KDG T +
Sbjct: 349 RFL-WNSERSGYEHLYLASEDGRTLTPLTSGNWVVDALLAVDEQAGNVYFAASKDGPTQT 407

Query: 417 KLYSIDL-NGRNETLINTPA 435
            +Y++ L  G  E   NT  
Sbjct: 408 HIYAVPLAGGAIEKRSNTNG 427


>gi|322796007|gb|EFZ18631.1| hypothetical protein SINV_09056 [Solenopsis invicta]
          Length = 482

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 66/155 (42%), Gaps = 13/155 (8%)

Query: 182 ESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    +L +   +             Q++ + +FSP+ + +A A++D      + 
Sbjct: 339 ERLVSGSDDFTLFLWKPEKQKKPIARMTGHQQLINDVKFSPDGRVIASASFDK----SIK 394

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTN 299
           L D+ I      +      + +  +S++  R L+S   D  + ++S+  ++    + L  
Sbjct: 395 LWDSNIGTYITSLRGHVQAVYSIAWSAD-SRLLVSGSADSTLKVWSM--KTKKLSQDLPG 451

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                 +  +SPD  ++V      GK+++  +  N
Sbjct: 452 HADEVYAVDWSPDGLRVV----SGGKDKVLRLWQN 482



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 6/132 (4%)

Query: 232 DDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L      + P  R+   + +I   +FS +G+    S   D+++ ++  ++ 
Sbjct: 343 SGSDDFTLFLWKPEKQKKPIARMTGHQQLINDVKFSPDGRVIA-SASFDKSIKLWDSNI- 400

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 L   +    S ++S DS  +V  S       L V         +         +
Sbjct: 401 GTYITSLRGHVQAVYSIAWSADSRLLVSGS---ADSTLKVWSMKTKKLSQDLPGHADEVY 457

Query: 351 DPVWSPQGDLIA 362
              WSP G  + 
Sbjct: 458 AVDWSPDGLRVV 469



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 52/151 (34%), Gaps = 7/151 (4%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+  L+S   D  + ++  + Q     R+T    +     +SPD   I   S     + +
Sbjct: 337 GEERLVSGSDDFTLFLWKPEKQKKPIARMTGHQQLINDVKFSPDGRVIASASF---DKSI 393

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +  SN        +    + +   WS    L+  +  +     +  MK     + L   
Sbjct: 394 KLWDSNIGTYITSLRGHVQAVYSIAWSADSRLLV-SGSADSTLKVWSMKTKKLSQDLPGH 452

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
              + A  WSP G  ++       D   +L+
Sbjct: 453 ADEVYAVDWSPDGLRVV---SGGKDKVLRLW 480



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 57/185 (30%), Gaps = 16/185 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +    FSP+ + +A  + D      V L D             R  +L   +S
Sbjct: 117 LEGHKEAVISVAFSPDGKHLASGSGDT----TVRLWDIYTQTPHYTCEGHRHWVLCISWS 172

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-----SPDSSQIVFESD 321
             G +   S  K+  + +++ D      + +T       S  +     +P+   +   S 
Sbjct: 173 PCGTKLA-SACKNGLIYLWNPDTGRQIGKAMTGHRMWVTSLCWEPYHKNPECLHLASASK 231

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 + +  +  +   R+      S     W   G  + ++        +   + DG 
Sbjct: 232 ---DCDIRIWDTKRAQTCRVLSGHTRSVTCIKW--GGSGLIYSASQDRTIKVWRAE-DGV 285

Query: 382 QERLL 386
             R L
Sbjct: 286 LCRTL 290



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 35/101 (34%), Gaps = 21/101 (20%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           + R    +   +  +++  FS +GK    S   D  + ++ +          T T     
Sbjct: 110 VTRCTGSLEGHKEAVISVAFSPDGKHLA-SGSGDTTVRLWDI---------YTQTPHYTC 159

Query: 306 SA--------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                     S+SP  +++   + + G   +Y+   +   Q
Sbjct: 160 EGHRHWVLCISWSPCGTKLA-SACKNG--LIYLWNPDTGRQ 197


>gi|228902881|ref|ZP_04067023.1| TolB domain protein [Bacillus thuringiensis IBL 4222]
 gi|228856755|gb|EEN01273.1| TolB domain protein [Bacillus thuringiensis IBL 4222]
          Length = 399

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 88/250 (35%), Gaps = 55/250 (22%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG   +     + + +  P++S + + +AY     ++IL +Y +     +
Sbjct: 22  RHHNLWI-KVDGKEKQLT---KGENITGPKWSHDGEWLAYVKGKKQNILELYRL-----K 72

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 + + D++        N  F N+SA 
Sbjct: 73  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLNTFDVEKK------NADFENVSAG 122

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD    +  S+       +     G+    + +D   +               
Sbjct: 123 VGDYAWYPDGKNFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 178

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPT 396
                      WSP    I+F       +S +   + +++ DGS+ E++     N Q   
Sbjct: 179 DFLALVASGFKWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNEQWFQ 238

Query: 397 WSPSGRSLIF 406
           WSPS   L +
Sbjct: 239 WSPSKNILAY 248



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       + + K DG +E+ L +  N+  P WS  G  L + + K      +LY
Sbjct: 17  KVAFIRH----HNLWI-KVDG-KEKQLTKGENITGPKWSHDGEWLAYVKGKK-QNILELY 69

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 70  RLK-DGKKVTPFHS--EASNYQWSP 91


>gi|228935677|ref|ZP_04098490.1| TolB domain protein [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228823915|gb|EEM69734.1| TolB domain protein [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
          Length = 412

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 88/248 (35%), Gaps = 51/248 (20%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY   + ++ L +Y +     +
Sbjct: 37  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSYDGEWLAYVKGEKQNTLELYRL-----K 87

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K++  F S +   ++S               +  + V+ ++   E ++  +      +
Sbjct: 88  DGKKVTPFHSEVSNYQWSPTENIIAFIFT--GTLHTFKVEKKNADFENVSAGVGDY---A 142

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-------------------- 348
           + P+  + +  S+       +     G+    + +D   +                    
Sbjct: 143 WYPNGKKFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHDDFLAL 198

Query: 349 -YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWS 398
                 WSP    I+F       +S +   + +++ DGS+     ++L+     +   W+
Sbjct: 199 VASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRPDGSRFEKVDQVLLNTQWFK---WA 255

Query: 399 PSGRSLIF 406
           P+   L +
Sbjct: 256 PANNILAY 263



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 10/87 (11%)

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  IAF +       + + K DG +E+ L +   +  P WS  G  L + + +      +
Sbjct: 30  GVKIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSYDGEWLAYVKGEK-QNTLE 82

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           LY +  +G+  T  ++    S+ QW  
Sbjct: 83  LYRLK-DGKKVTPFHS--EVSNYQWSP 106


>gi|154420966|ref|XP_001583497.1| Transcriptional repressor tup11-related protein [Trichomonas
           vaginalis G3]
 gi|121917739|gb|EAY22511.1| Transcriptional repressor tup11-related protein [Trichomonas
           vaginalis G3]
          Length = 402

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 85/227 (37%), Gaps = 27/227 (11%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSS 267
           D ++    FSP+ + +A      + +LR+Y  D       +++G+     S + +  +S 
Sbjct: 103 DSVIVSTAFSPDGKNLA---IGADKVLRIYNFDQDNFILGEKVGDQDTQSSHVRSISWSP 159

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS----PDSSQIVFESDRE 323
           + ++ +I   +D+ + I+ +D  +     L +++ +     +     PD  +        
Sbjct: 160 DSRK-VICGVEDKRVYIFKIDPTTENGSCLEHSIAVPDQHIFQVMFLPDGKRFAVS---T 215

Query: 324 GKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           G   + +   N      + ++  +        +P    +A            V   D   
Sbjct: 216 GPGIVQIWDVNTYQMINKFARQTDQFAISMALAPDQKTLAV-----GYADYYVAFWDIEA 270

Query: 383 ERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +LL +    D  + +  ++P  + LI S     D   K++ I  NG
Sbjct: 271 GKLLFDQKCHDEGVNSILFTPDAKRLITSSL---DNTVKIWDIRPNG 314


>gi|75761169|ref|ZP_00741159.1| Hypothetical exported protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74491342|gb|EAO54568.1| Hypothetical exported protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 412

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 88/250 (35%), Gaps = 55/250 (22%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG   +     + + +  P++S + + +AY     ++IL +Y +     +
Sbjct: 35  RHHNLWI-KVDGKEKQLT---KGENITGPKWSHDGEWLAYVKGKKQNILELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 + + D++        N  F N+SA 
Sbjct: 86  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLNTFDVEKK------NADFENVSAG 135

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD    +  S+       +     G+    + +D   +               
Sbjct: 136 VGDYAWYPDGKNFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 191

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPT 396
                      WSP    I+F       +S +   + +++ DGS+ E++     N Q   
Sbjct: 192 DFLALVASGFKWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNEQWFQ 251

Query: 397 WSPSGRSLIF 406
           WSPS   L +
Sbjct: 252 WSPSKNILAY 261



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       + + K DG +E+ L +  N+  P WS  G  L + + K      +LY
Sbjct: 30  KVAFIRH----HNLWI-KVDG-KEKQLTKGENITGPKWSHDGEWLAYVKGKK-QNILELY 82

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 83  RLK-DGKKVTPFHS--EASNYQWSP 104


>gi|271964119|ref|YP_003338315.1| hypothetical protein Sros_2602 [Streptosporangium roseum DSM 43021]
 gi|270507294|gb|ACZ85572.1| hypothetical protein Sros_2602 [Streptosporangium roseum DSM 43021]
          Length = 297

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 80/249 (32%), Gaps = 36/249 (14%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
               +  +   +P+ +++A+   D++  LRV       D+   +   +    L P ++++
Sbjct: 59  GGGTLSAQFSVAPDGRRIAWV--DEKGRLRV--GSASGDKVIAKDAAYIGPCLTPAWTAD 114

Query: 269 GKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISA---SYSPDSSQIV-FESDRE 323
           GKR     +   A     V D                +     ++S D   +  +  D  
Sbjct: 115 GKRVAYLKKGTAAAMTVVVADANGKGVV----DSGTTLGPCHLTWSADGRTLAGYAGDTA 170

Query: 324 GKEQLYVMQSNGSDQKRISQDKEA---SYFDPVWSPQGDLIAFTKFSGEK---------- 370
           G   +Y++ +    + R+S        +      SP    +                   
Sbjct: 171 G---VYLLDT----RSRVSVKAPGIKLANHVESLSPDSRRVVVNAIGPNAPGGDGSWTPL 223

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           F   +      ++  +     L    +   GR    + +  G   + L ++D +G+    
Sbjct: 224 FTPSIYDTKTGKKITIPVKGRLVGARYLRDGR---LAVRVRGTAANTLVTLDASGKEIQR 280

Query: 431 INTPAYASD 439
           +  PA A +
Sbjct: 281 VAEPAKARN 289



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 12/113 (10%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +   R+G+ Q+   +  G    RI             +P G  IA+     EK  + V  
Sbjct: 35  YFGYRDGQVQVVTDRRPGLTSVRI--GGGTLSAQFSVAPDGRRIAWV---DEKGRLRVGS 89

Query: 378 KDGSQERLLVED----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             G   +++ +D         P W+  G+ + +  KK       +   D NG+
Sbjct: 90  ASGD--KVIAKDAAYIGPCLTPAWTADGKRVAYL-KKGTAAAMTVVVADANGK 139


>gi|229106763|ref|ZP_04236989.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock3-28]
 gi|228676683|gb|EEL31303.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock3-28]
          Length = 652

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 64/202 (31%), Gaps = 45/202 (22%)

Query: 266 SSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GK                   ++  + +   +  LT     +    +SPDS  I + 
Sbjct: 26  SDDGKNVAFVKKTANWKDNTYRNHVWIYEKEKGKSYPLTIGDIDSTYPLWSPDSKGIAYL 85

Query: 320 SDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---------- 368
           S   +GK Q++    +G  + +I+ +KE    +  W P G    +   S           
Sbjct: 86  SPVGDGKNQIFFKSLDGYSEVQITDEKEG-VSNFKWEPTGKGFYYIAQSKECEEIKKRKE 144

Query: 369 --EKFA---------------IGVMKKDGSQER------LLVEDSNL--QAPTWSPSGRS 403
               F                I  +K++  QE+       L +  +        S  G+ 
Sbjct: 145 RYGDFHHVGKEHQNNCLYYIEIEKVKQNDKQEQKVSGVYQLTDGKDFYIHNFDISNDGKK 204

Query: 404 LIFSRKK--DGDTGSKLYSIDL 423
           ++       +      LY +D+
Sbjct: 205 VVCMATPSLNDYMNGDLYILDV 226



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++ +        ++   +     P+WSP   
Sbjct: 22  STNISDDGKNVAFVKKTANWKDNTYRNHVWIYEKEKGKSYPLT-IGDIDSTYPLWSPDSK 80

Query: 360 LIAFTKFSG-EKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G  K  I     DG S+ ++  E   +    W P+G+   +  + 
Sbjct: 81  GIAYLSPVGDGKNQIFFKSLDGYSEVQITDEKEGVSNFKWEPTGKGFYYIAQS 133



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 9/99 (9%)

Query: 354 WSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  G  +AF K +        +  + + +K+ G    L + D +   P WSP  + + +
Sbjct: 25  ISDDGKNVAFVKKTANWKDNTYRNHVWIYEKEKGKSYPLTIGDIDSTYPLWSPDSKGIAY 84

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAY-ASDPQWVG 444
                GD  ++++   L+G +E  I       S+ +W  
Sbjct: 85  LSPV-GDGKNQIFFKSLDGYSEVQITDEKEGVSNFKWEP 122



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/276 (13%), Positives = 85/276 (30%), Gaps = 57/276 (20%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y     D     P +SP+ + +AY +    D        +    +  +I + +  +   +
Sbjct: 61  YPLTIGDIDSTYPLWSPDSKGIAYLS-PVGDGKNQIFFKSLDGYSEVQITDEKEGVSNFK 119

Query: 265 FSSNGKRALISVQ----------------------KDEAMDIYSVDLQS----------- 291
           +   GK      Q                      + +   +Y ++++            
Sbjct: 120 WEPTGKGFYYIAQSKECEEIKKRKERYGDFHHVGKEHQNNCLYYIEIEKVKQNDKQEQKV 179

Query: 292 NATERLTNTLFINISAS-YSPDSSQIVFESDREGKE----QLYVMQSNGSDQKRISQDKE 346
           +   +LT+     I     S D  ++V  +     +     LY++     + ++++ D  
Sbjct: 180 SGVYQLTDGKDFYIHNFDISNDGKKVVCMATPSLNDYMNGDLYILDVEAGELQKMNIDTL 239

Query: 347 ASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                  +SP+GD I ++                   I  M   G   + L    +   P
Sbjct: 240 LGASIC-FSPEGDKICYSASIREKDYYRNHIQDNTLEIYDMNT-GEVIQPLTNFDSTVTP 297

Query: 396 -TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             W+  G  + +       T  ++  +  +G  E L
Sbjct: 298 LQWTAKGILIRW----QDKTNYRIGLLAEDGTVEAL 329


>gi|190576287|ref|YP_001974132.1| hypothetical protein Smlt4495A [Stenotrophomonas maltophilia K279a]
 gi|190014209|emb|CAQ47853.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 287

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 60/163 (36%), Gaps = 17/163 (10%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLY---VMQSNGSDQKRISQDKEASYFDPVWS 355
           +T      A+ S D  +IVF    E    L+   V+       + ++        DP +S
Sbjct: 36  STRADEGRATISADGRRIVFARRGEAGWGLWEARVVDGRWQQAQALAVGVAGEARDPYFS 95

Query: 356 PQGDLIAFTKFSGEKFAIG--VMKKDGSQER---LLVEDSNLQA--PTWSPSGRSLIFSR 408
             G  + F        A+    ++ DG   +   +  +    +   P  S  G  L+F+R
Sbjct: 96  RDGRWLLFAAGREGALALYRAAVEADGRLGKAHPMAGDGGRHEERGPALSADGTRLLFAR 155

Query: 409 KKDGDTGSKLYSIDLNGRN-------ETLINTPAYASDPQWVG 444
           ++    G  L+   L+ +         T +N+    +D  W+G
Sbjct: 156 QQGRGAGWNLFVATLDAQGMRGPATALTALNSADDETDGDWLG 198



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 57/172 (33%), Gaps = 15/172 (8%)

Query: 218 RFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             S + +++ +A   +    +    ++D R  +A             P FS +G+  L +
Sbjct: 45  TISADGRRIVFARRGEAGWGLWEARVVDGRWQQAQALAVGVAGEARDPYFSRDGRWLLFA 104

Query: 276 VQKDEAMDIYS----VDLQSNATERLTNTLF--INISASYSPDSSQIVFESD--REGKEQ 327
             ++ A+ +Y      D +      +            + S D ++++F     R     
Sbjct: 105 AGREGALALYRAAVEADGRLGKAHPMAGDGGRHEERGPALSADGTRLLFARQQGRGAGWN 164

Query: 328 LYVMQSNG----SDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIG 374
           L+V   +          ++    A    D  W      + F++ +G    + 
Sbjct: 165 LFVATLDAQGMRGPATALTALNSADDETDGDWLGNDGAVVFSRGNGTTAQVW 216



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 55/169 (32%), Gaps = 14/169 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + R +  +    +G       V+D      + L         +P FS + + + +A    
Sbjct: 49  DGRRIVFARRGEAGWGLWEARVVDGRWQQAQALAVGVAGEARDPYFSRDGRWLLFAA-GR 107

Query: 234 EDILRVYLMDTRIDR-----APKRIGNFRSMILAPRFSSNGKRALISVQKDE----AMDI 284
           E  L +Y      D       P      R     P  S++G R L + Q+       + +
Sbjct: 108 EGALALYRAAVEADGRLGKAHPMAGDGGRHEERGPALSADGTRLLFARQQGRGAGWNLFV 167

Query: 285 YSVDLQS--NATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLY 329
            ++D Q        LT  N+        +  +   +VF        Q++
Sbjct: 168 ATLDAQGMRGPATALTALNSADDETDGDWLGNDGAVVFSRGNGTTAQVW 216


>gi|332206059|ref|XP_003252107.1| PREDICTED: aladin isoform 2 [Nomascus leucogenys]
          Length = 513

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 97/300 (32%), Gaps = 35/300 (11%)

Query: 135 DRKQIIGKKFFSSPASWR------KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           + + + G  + S P  +R       + H   D +    T  + D  +R  F+        
Sbjct: 22  NNELVTGSSYESPPPDFRGQWINLPVLHLTKDPL---KTPGRLDHGTRTAFIHHREQVWK 78

Query: 189 IKNSLC-----------VMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATYDDED 235
              ++            + + +     ++  +    L   R+  S +     + +   ED
Sbjct: 79  RCINIWRDVGLFGVLNEIANSEEEVFEWVKTASGWALALCRWASSLHGSLFPHLSLRSED 138

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           ++  +   T     P      +  + A  +       L    +   + I+++D  S +T 
Sbjct: 139 LIAEFAQVTNCTIVPSLKHRLQRNVAALAWKPLSASVLAVACQS-CILIWTLDPTSLSTR 197

Query: 296 ------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                 ++ +        S +++P   +++  S  +    + V   +      +   +  
Sbjct: 198 PSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIRVWDVSTETCVPLPWFRGG 255

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
              +  WSP G  I  T  S   F +   +     ER        Q   WSP G  L+F+
Sbjct: 256 GVTNLFWSPDGSKILATTPS-AVFRVWEAQMWT-CERWPTLSGRCQTGCWSPDGSRLLFT 313



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 60/209 (28%), Gaps = 42/209 (20%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V D        L   R   +    +SP+  K+   T     + RV+          +R
Sbjct: 236 IRVWDVSTETCVPLPWFRGGGVTNLFWSPDGSKILATT--PSAVFRVWEAQMWT---CER 290

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                       +S +G R L +V       IYS+       ER                
Sbjct: 291 WPTLSGRCQTGCWSPDGSRLLFTVL--GEPLIYSLSF----PERCGEGKG---------- 334

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDLIAFTKFSG 368
                    R G  +   + ++ S+    + D E          VW P G+ +A      
Sbjct: 335 ---------RVGGAKSATIVADLSETTIQTPDGEERLGGEAHSMVWDPSGERLAVLMKGN 385

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +        DG    LL    N  +P +
Sbjct: 386 PRVQ------DGKPVILLFRTRN--SPVF 406


>gi|289811098|ref|ZP_06541727.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 117

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 44/122 (36%), Gaps = 12/122 (9%)

Query: 310 SPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +P ++ I F   D  G  QL+++   G + ++++           W P G  +     + 
Sbjct: 3   NPQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN- 61

Query: 369 EKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               I        +   L        +  A  +SP GR + +  +  G    +L+ +   
Sbjct: 62  ---RIACCDAQSGKIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTET 115

Query: 425 GR 426
           GR
Sbjct: 116 GR 117



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 7/114 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  + +++L+  +     +   +   +  A  +  +GK   + ++   
Sbjct: 4   PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVLEN-- 61

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVM 331
              I   D QS   + LT       SA    +SPD   + +  + +G  QL+V 
Sbjct: 62  --RIACCDAQSGKIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWVT 113



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 30/102 (29%), Gaps = 3/102 (2%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT     +     + P+ + +      +  I        
Sbjct: 14  RDDNGVAQLWLISPQGGEPRQLTHHATGVQSAFNWHPSGKWLGLVL--ENRIACCDAQSG 71

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           +ID    R  N  S   A  FS +G+      +      ++ 
Sbjct: 72  KIDFLTARHDNPPSAD-AVVFSPDGRHVAWMEEVKGFRQLWV 112


>gi|149918393|ref|ZP_01906883.1| hypothetical protein PPSIR1_35672 [Plesiocystis pacifica SIR-1]
 gi|149820693|gb|EDM80103.1| hypothetical protein PPSIR1_35672 [Plesiocystis pacifica SIR-1]
          Length = 675

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 73/225 (32%), Gaps = 29/225 (12%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           + Y   ++ D+LR+    +  ++  ++      +      S +G   + S     +    
Sbjct: 288 IYYWAVNEGDVLRIQPGASEPEQFLEKPEGTTCLACH-SVSRDGSTIVASQNGGPSPWA- 345

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE---GKEQLYVMQS-NGSDQKRI 341
           + +   +               + SPD + I++        G+    ++ + +  +    
Sbjct: 346 TFNPDGSNVFASAQASGFQ---AISPDGAWILWGQSNGAFLGQPSYMILSAKDSDEIAAQ 402

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKD---------GSQERLL 386
                     P WS  G  +++   +   +       + V+  D            E +L
Sbjct: 403 MFQTTGYPVHPAWSNNGARLSYGVRTDGNWLDFNNSTLWVVDVDVQSNPPAFLNPVEIVL 462

Query: 387 VEDS--NLQAPTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGR 426
            + +   +  PTWSP    + F R     T     +L+ +  +G 
Sbjct: 463 NDPARPTVSYPTWSPDDEWIAFGRATQARTRGAAGELWMVHPDGT 507



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 56/165 (33%), Gaps = 32/165 (19%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S S D S IV  S   G         +GS+          +      SP G  I + + +
Sbjct: 325 SVSRDGSTIV-ASQNGGPSPWATFNPDGSNV----FASAQASGFQAISPDGAWILWGQSN 379

Query: 368 G------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT----GSK 417
           G          +     D    ++         P WS +G  L +  + DG+      S 
Sbjct: 380 GAFLGQPSYMILSAKDSDEIAAQMFQTTGYPVHPAWSNNGARLSYGVRTDGNWLDFNNST 439

Query: 418 LYSIDLN---------GRNETLINTPA--------YASDPQWVGF 445
           L+ +D++            E ++N PA        ++ D +W+ F
Sbjct: 440 LWVVDVDVQSNPPAFLNPVEIVLNDPARPTVSYPTWSPDDEWIAF 484



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 48/150 (32%), Gaps = 33/150 (22%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILR-----VYLMDTRIDRAPKRIGNF---------R 257
                P +S N  +++Y    D + L      ++++D  +   P    N          R
Sbjct: 408 GYPVHPAWSNNGARLSYGVRTDGNWLDFNNSTLWVVDVDVQSNPPAFLNPVEIVLNDPAR 467

Query: 258 SMILAPRFSSNGKRALI-----SVQKDEAMDIYSVDLQSNATERLTNTLFI--------- 303
             +  P +S + +         +  +  A +++ V         L               
Sbjct: 468 PTVSYPTWSPDDEWIAFGRATQARTRGAAGELWMVHPDGTGAVELDRANGFNHIPELQTA 527

Query: 304 -NISASYSPDSS----QIVFESDREGKEQL 328
            N   ++ P +S     +VF S+R+    L
Sbjct: 528 QNYEPTFVPVASGGYFWMVFVSERQYGNTL 557


>gi|186476844|ref|YP_001858314.1| 6-phosphogluconolactonase [Burkholderia phymatum STM815]
 gi|184193303|gb|ACC71268.1| 6-phosphogluconolactonase [Burkholderia phymatum STM815]
          Length = 385

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 48/328 (14%), Positives = 92/328 (28%), Gaps = 34/328 (10%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW----RKIAHTISDDI 162
           G   L+ G       + + V +R +D K    I      +   S+    R   H  +  +
Sbjct: 21  GVYDLIVGTYTGPKSEGIYV-YR-FDTKSGDAIPMSSAKTDNPSYVIASRDGRHVYA--V 76

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFS- 220
            +             +              L  +  DG +  YL+ S D   L    +S 
Sbjct: 77  NEQPGDNGPAEQRGGISAFSFDARNGQLTFLNRVSSDGNDPCYLSISPDGKYLTTANYSV 136

Query: 221 ---PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              P      +    D  +    L        P +     + + +  FS +GK       
Sbjct: 137 AANPGGSFAVFPLQADGQVGASVLTVHHDGSGPVKGRQDNAHVHSTVFSPDGKFLFAQDL 196

Query: 278 KDEAMDIYSVDLQSN------ATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQL 328
             + +  Y      +        +R T+            +  D       S+      +
Sbjct: 197 GTDKLYSYRYTPDGSRGLFGPTEKRYTDVKA-GSGPRHLAFGADGKYAYLTSELSATVTV 255

Query: 329 YVMQSNGSDQKRIS------QDKEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKDGS 381
           +        Q ++          +        SP G  + A  +    +  I  +     
Sbjct: 256 FRYDDGTLTQLQVVPMTKPGFKGQVGAAAIHLSPDGRFLYASNRGDANEIVIYAVDPANG 315

Query: 382 QERLL-VEDSNLQAPT-WS--PSGRSLI 405
             R +  + S  +AP  +S  P+G+ LI
Sbjct: 316 HLREVGRQSSLGKAPREFSIDPTGQWLI 343


>gi|37682095|gb|AAQ97974.1| TUWD12 [Danio rerio]
          Length = 490

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 86/238 (36%), Gaps = 15/238 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    SL + +       +       ++    F+P+   VA ++ D      V L    
Sbjct: 35  TGSCDKSLMIWNLAPKARAFRFVGHTDVITGVNFAPSGSLVASSSRDQ----TVRLWTPS 90

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           I           + + +  FS +G+R + +   D+++ ++ V+ +      L        
Sbjct: 91  IKGESTVFKAHTASVRSVNFSRDGQRLV-TASDDKSVKVWGVERK-KFLYSLNRHTNWVR 148

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A +SPD   I    D      + +  ++      I  D   S     ++  G  IA + 
Sbjct: 149 CARFSPDGRLIASCGD---DRTVRLWDTSSHQCINIFTDYGGSATFVDFNSSGTCIA-SS 204

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +     I  ++ +   +   V ++ +   ++ PSG  LI      G + S +  +DL
Sbjct: 205 GADNTIKIWDIRTNKLIQHYKVHNAGVNCFSFHPSGNYLI-----SGSSDSTIKILDL 257



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 66/170 (38%), Gaps = 9/170 (5%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             + +I    F+ N K+   +   D+++ I+++  ++ A   + +T  I    +++P  S
Sbjct: 16  GHKDVISCADFNPNNKQLA-TGSCDKSLMIWNLAPKARAFRFVGHTDVI-TGVNFAPSGS 73

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S R+   +L+     G     + +   AS     +S  G  +  T    +   + 
Sbjct: 74  LVA-SSSRDQTVRLWTPSIKGEST--VFKAHTASVRSVNFSRDGQRLV-TASDDKSVKVW 129

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +++      L    + ++   +SP GR +        D   +L+    +
Sbjct: 130 GVERKKFLYSLNRHTNWVRCARFSPDGRLIA---SCGDDRTVRLWDTSSH 176



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 72/216 (33%), Gaps = 21/216 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + Q++  A+ D      V +      +    +    + +   RFS +G+    S  
Sbjct: 109 NFSRDGQRLVTASDDK----SVKVWGVERKKFLYSLNRHTNWVRCARFSPDGRLIA-SCG 163

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++  D  S+    +        SA++   +S     +       + +     + 
Sbjct: 164 DDRTVRLW--DTSSHQCINIFTDYG--GSATFVDFNSSGTCIASSGADNTIKIWDIRTNK 219

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-- 395
             +  +   A      + P G+ +  +  S     I     D  + RL+      + P  
Sbjct: 220 LIQHYKVHNAGVNCFSFHPSGNYLI-SGSSDSTIKI----LDLLEGRLIYTLHGHKGPVL 274

Query: 396 --TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             T+S  G   +F+     D+   ++  + +  N  
Sbjct: 275 TVTFSRDGD--LFASG-GADSQVLMWKTNFDSLNYR 307



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 61/184 (33%), Gaps = 14/184 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y        +   RFSP+ + +A       D   V L DT   +      ++        
Sbjct: 138 YSLNRHTNWVRCARFSPDGRLIASC----GDDRTVRLWDTSSHQCINIFTDYGGSATFVD 193

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDR 322
           F+S+G     S   D  + I+  D+++N   +    +   +N   S+ P  + ++  S  
Sbjct: 194 FNSSGTCIA-SSGADNTIKIW--DIRTNKLIQHYKVHNAGVNCF-SFHPSGNYLISGSS- 248

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                + ++              +       +S  GDL A +  +  +  +     D   
Sbjct: 249 --DSTIKILDLLEGRLIYTLHGHKGPVLTVTFSRDGDLFA-SGGADSQVLMWKTNFDSLN 305

Query: 383 ERLL 386
            R L
Sbjct: 306 YREL 309


>gi|83815573|ref|YP_445097.1| hypothetical protein SRU_0965 [Salinibacter ruber DSM 13855]
 gi|83756967|gb|ABC45080.1| hypothetical protein SRU_0965 [Salinibacter ruber DSM 13855]
          Length = 381

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 83/229 (36%), Gaps = 26/229 (11%)

Query: 218 RFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            + PNQ+++A   Y   DD       L     D   + +G      +   +  +G     
Sbjct: 111 AWHPNQERLAVGYYRPTDDGGRGPGGLQVVTPDGTTRDVGCSSVREVL-HWLPDG----- 164

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQL- 328
           S+      ++Y VD   +   + +  +       Y+P   Q+ +     E DR+  E + 
Sbjct: 165 SLAARTDDNLYVVDA-GDCATQASLDIRRMHHLRYAPTGQQMAYIYRELEYDRDRGEYVP 223

Query: 329 ---YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
              +V+              E       W+P+ + +A            V+  DGS+   
Sbjct: 224 DSSFVLSGPDGTNPETLFGNERHARHHRWAPETNEVALDVRVEASGHRQVVVYDGSRPTF 283

Query: 386 LV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           LV      ++   P WSPSG  + F+ + D  + +   ++ + G+   L
Sbjct: 284 LVSPDQTTADQVHPRWSPSGNRIAFTLRSDASSQA---AVRVKGQTRRL 329



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 71/224 (31%), Gaps = 31/224 (13%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--T 298
           ++        + +    +   A   S +G+    S    ++  +  +DL +    R+   
Sbjct: 42  VLHDARTDESRTLAAGATAKPARAVSPSGRHLAFSYATADSSHLTLLDLTTQQAHRVHAA 101

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP------ 352
               +  S ++ P+  ++     R   +            + ++ D              
Sbjct: 102 AGTSVAYSLAWHPNQERLAVGYYRPTDDG----GRGPGGLQVVTPDGTTRDVGCSSVREV 157

Query: 353 -VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-- 409
             W P G L A T        + V+       +  ++   +    ++P+G+ + +  +  
Sbjct: 158 LHWLPDGSLAART-----DDNLYVVDAGDCATQASLDIRRMHHLRYAPTGQQMAYIYREL 212

Query: 410 -KDGDTGSKLYSIDL-------NGRN-ETLINTPAYASDPQWVG 444
             D D G   Y  D        +G N ETL     +A   +W  
Sbjct: 213 EYDRDRGE--YVPDSSFVLSGPDGTNPETLFGNERHARHHRWAP 254



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 64/188 (34%), Gaps = 16/188 (8%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
             R++ H     +  + TG++  +  R L         +  +S  +   DG N   L   
Sbjct: 189 DIRRMHH-----LRYAPTGQQMAYIYRELEYDRDRGEYVPDSSFVLSGPDGTNPETLF-G 242

Query: 210 RDQILFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            ++     R++P   +VA     +     +V + D              +  + PR+S +
Sbjct: 243 NERHARHHRWAPETNEVALDVRVEASGHRQVVVYDGSRPTFLVSPDQTTADQVHPRWSPS 302

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G R   +++ D +            T RL           +  D S +V      G + +
Sbjct: 303 GNRIAFTLRSDASSQAAV--RVKGQTRRLGRVDGAVWG--WLDDRSVVV-----PGPDSV 353

Query: 329 YVMQSNGS 336
            V   NG+
Sbjct: 354 RVKALNGT 361


>gi|320162091|ref|YP_004175316.1| hypothetical protein ANT_26900 [Anaerolinea thermophila UNI-1]
 gi|319995945|dbj|BAJ64716.1| hypothetical protein ANT_26900 [Anaerolinea thermophila UNI-1]
          Length = 741

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 63/188 (33%), Gaps = 23/188 (12%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NGK  L   Q +  M I  + L     + L         A+ + + + + + ++      
Sbjct: 486 NGKTIL--TQLNPQMQIVMISLNGEEPKILEINAAN---ATLNKEGTFVAYTTEAG---- 536

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + V      + K +            WSP    +A    +G++  I ++  +  + + L 
Sbjct: 537 IIVQNLVNGE-KLLIPGSYGRDL--RWSPDSHFLAVVN-AGDQNGIFLINLETQERKQLT 592

Query: 388 EDSNLQAPTWSPSGRSLIFS---RKKDGDTGSKLYSIDLNGRNETLINTPAYAS------ 438
                    WSP G  L ++      DG     +   +   R+  ++   +  +      
Sbjct: 593 TLGYEDIAGWSPDGGILYYAIPGSSPDGFLLRAIQIENGESRDVFVLENSSRKAPFATIS 652

Query: 439 -DPQWVGF 445
            D  W+ +
Sbjct: 653 WDGNWIAY 660



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-- 275
           R+SP+   +A    +  D   ++L++    +  K++       +A  +S +G     +  
Sbjct: 559 RWSPDSHFLAVV--NAGDQNGIFLINLET-QERKQLTTLGYEDIA-GWSPDGGILYYAIP 614

Query: 276 -VQKDEAM--DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVM 331
               D  +   I   + +S     L N+      A+ S D + I +  SD  G   LY+ 
Sbjct: 615 GSSPDGFLLRAIQIENGESRDVFVLENSSRKAPFATISWDGNWIAYRASDNSG---LYIK 671

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKD 379
             +G+  + I ++   +    VW  +  L+A +       +  + ++  D
Sbjct: 672 GMDGNPARLILENPALAINGLVWDEESHLLAVSLITQQNPEGEVFLISPD 721


>gi|228983420|ref|ZP_04143632.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228776286|gb|EEM24640.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 652

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 52/339 (15%), Positives = 112/339 (33%), Gaps = 64/339 (18%)

Query: 143 KFFSSPASWRKIAHTISDDIYQS-------ITGEKGDFNSRILFVSES-----VVSGIIK 190
            F    A+W+   +     IY+        +T    D    +   +          G  K
Sbjct: 33  AFVKRTANWKDNTYRNHVWIYEKGKGKSYPLTNGDIDSTCPLWSPNSRDIAYLSPGGNGK 92

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-----EDILRVY----- 240
           N + V   DG     +T   + I    ++    +   Y T        +    +Y     
Sbjct: 93  NQIFVKSLDGYGGVQITDEEEGISTF-KWDHTGKGFYYITQSKECEEIKKRKELYGDFQH 151

Query: 241 ---------------LMDTRIDRAPKRIGNFRSMILAPRF-------SSNGKRALI---- 274
                              + D+  + I     +     F       S++GK+ +     
Sbjct: 152 VGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTDGKDFYIHDFDISNDGKKVVCMATP 211

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKE------- 326
           S+      D+Y +D+++   +++     +  S  +SP+ S+I +  S RE +        
Sbjct: 212 SLNDYMNGDLYILDVEAEELQKMNVDRLLGGSVCFSPEGSKICYSASIREKEYYRNHIQE 271

Query: 327 -QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             L +   N  +  +   + +++     W+ +G  I         + IGV+  +G     
Sbjct: 272 STLEIYDMNTGEVLQPLTNFDSTVMPLQWTAKG--ILIRWQDKTNYLIGVL-AEGGTVET 328

Query: 386 LVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           L E  D  +   + +  G  + +++    +T  ++Y  D
Sbjct: 329 LSEKVDGFIMDASITRDGNHITYNKAITNET-FEIYLDD 366



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++ +        ++ + +     P+WSP   
Sbjct: 22  STNISDDGKNVAFVKRTANWKDNTYRNHVWIYEKGKGKSYPLT-NGDIDSTCPLWSPNSR 80

Query: 360 LIAFTKFSG-EKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G  K  I V   DG    ++  E+  +    W  +G+   +  + 
Sbjct: 81  DIAYLSPGGNGKNQIFVKSLDGYGGVQITDEEEGISTFKWDHTGKGFYYITQS 133



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 81/281 (28%), Gaps = 56/281 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     + N       P +S N +   
Sbjct: 24  NISDDGKNVAFVKRTANWKDNTYRNHVWIYEKGKGKSYPLTNGDIDSTCPLWSPNSRDIA 83

Query: 274 I-SVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDRE-------- 323
             S   +    I+   L      ++T+    I+    +        + +  +        
Sbjct: 84  YLSPGGNGKNQIFVKSLDGYGGVQITDEEEGISTF-KWDHTGKGFYYITQSKECEEIKKR 142

Query: 324 ----------GKEQ---------LYVMQSNGSDQK------RISQDKEASYFDPVWSPQG 358
                     GKE          +  +  N  +++      +++  K+    D   S  G
Sbjct: 143 KELYGDFQHVGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTDGKDFYIHDFDISNDG 202

Query: 359 DLIA-FTKFSGEKF---AIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS------ 407
             +      S   +    + ++  +  + + + V+     +  +SP G  + +S      
Sbjct: 203 KKVVCMATPSLNDYMNGDLYILDVEAEELQKMNVDRLLGGSVCFSPEGSKICYSASIREK 262

Query: 408 ---RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
              R    ++  ++Y ++  G     +        P QW  
Sbjct: 263 EYYRNHIQESTLEIYDMN-TGEVLQPLTNFDSTVMPLQWTA 302



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 8/117 (6%)

Query: 260 ILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           + +   S +GK      +            ++  +     +  LTN    +    +SP+S
Sbjct: 20  VSSTNISDDGKNVAFVKRTANWKDNTYRNHVWIYEKGKGKSYPLTNGDIDSTCPLWSPNS 79

Query: 314 SQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             I + S    GK Q++V   +G    +I+ ++E       W   G    +   S E
Sbjct: 80  RDIAYLSPGGNGKNQIFVKSLDGYGGVQITDEEEGISTFK-WDHTGKGFYYITQSKE 135


>gi|119196467|ref|XP_001248837.1| transcriptional repressor [Coccidioides immitis RS]
 gi|303322376|ref|XP_003071181.1| transcriptional repressor rco-1, putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240110880|gb|EER29036.1| transcriptional repressor rco-1, putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|320040625|gb|EFW22558.1| transcriptional repressor [Coccidioides posadasii str. Silveira]
          Length = 585

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 62/199 (31%), Gaps = 26/199 (13%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--------- 305
           +  S++   +FSS+GK                 D+ S    +L  TL  +          
Sbjct: 277 SHNSVVCCVKFSSDGKYVA----TGCNRSAQIFDVASG---QLVTTLQDDTANKEGDLYI 329

Query: 306 -SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  +SPD     F +      Q+ V        + I    E   +   +S  G  IA  
Sbjct: 330 RSVCFSPDGK---FLATGAEDRQIRVWDIANRKIRHIFAGHENDIYSLDYSRNGRYIASG 386

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                     V   DG QE +L  +  +     SP GR +        D   +++     
Sbjct: 387 SGDKTVRMWDVY--DGKQELILSIEDGVTTVAISPDGRYVAAGSL---DRSVRVWDT-TT 440

Query: 425 GRNETLINTPAYASDPQWV 443
           G     + +P    D  + 
Sbjct: 441 GYLVERLESPDGHRDSVYS 459



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/337 (13%), Positives = 109/337 (32%), Gaps = 53/337 (15%)

Query: 112 VTGRVIKEGKDRLRV-----EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           V   V      +          +++DV   + +   +  ++         ++        
Sbjct: 281 VVCCVKFSSDGKYVATGCNRSAQIFDVASGQLVTTLQDDTANKEGDLYIRSVC------- 333

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
               G F            +G     + V D     IR++    +  ++   +S N + +
Sbjct: 334 FSPDGKFL----------ATGAEDRQIRVWDIANRKIRHIFAGHENDIYSLDYSRNGRYI 383

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A  + D      V + D   D   + I +    +     S +G+    +   D ++ ++ 
Sbjct: 384 ASGSGDK----TVRMWDV-YDGKQELILSIEDGVTTVAISPDGRYVA-AGSLDRSVRVW- 436

Query: 287 VDLQSNAT-ERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-------- 334
            D  +    ERL +         S +++P+   +V  S  +   +++ +           
Sbjct: 437 -DTTTGYLVERLESPDGHRDSVYSVAFAPNGRDLVSGSL-DKTIKMWELTPPRGIMAGSG 494

Query: 335 --GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             G    R  +  +       ++P G  +             VM       +++++    
Sbjct: 495 PKGGKCVRTFEGHKDFVLSVCFTPDGHWVLSGSKDRGVQFWDVM---TGHAQMMLQGHRN 551

Query: 393 QAPTW--SPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              +   SP+G+  +F+    GD  +K++S    GR 
Sbjct: 552 SVISVAPSPTGQ--LFATG-SGDCRAKIWSYGPWGRR 585


>gi|115533709|ref|NP_492169.2| TAF (TBP-associated transcription factor) family member (taf-5)
           [Caenorhabditis elegans]
 gi|82658159|emb|CAB03035.2| C. elegans protein F30F8.8, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|82658171|emb|CAB05603.2| C. elegans protein F30F8.8, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 648

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/228 (17%), Positives = 74/228 (32%), Gaps = 45/228 (19%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D ++  + D +      R       + +  FS + +R LIS   D  + ++S++ Q NA 
Sbjct: 372 DNVQSQMFDLQGSTTSVRYTGHGGPVFSVNFSPD-RRLLISSAGDRTVRLWSMETQRNAV 430

Query: 295 ERLTNTLFINISASY----------SPDSSQIVFESDREGKEQLY--------------- 329
              T    +   A +          S D +  ++ +DR    +++               
Sbjct: 431 IYRT--PAVVWQAQFCSRGYYFATASADKTAAMWSTDRMHPLRIFADPYGDVGCIDYHPN 488

Query: 330 --------------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                         V       + RI    +AS     +SP G  I      G      +
Sbjct: 489 CNYIAGGSDDRYVRVWDVCSGTRVRIFSGHKASIIAVKFSPCGRYIVSLDAIGNLMIWDL 548

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +      +  +     + T+S  G     S    G++  +LYS+D 
Sbjct: 549 AYQRLVAAEITEQAGTKGSITFSRDGGVFAVS---HGNSSIQLYSLDT 593


>gi|52141150|ref|YP_085679.1| TolB domain-containing protein [Bacillus cereus E33L]
 gi|51974619|gb|AAU16169.1| possible tolB domain protein [Bacillus cereus E33L]
          Length = 410

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 87/250 (34%), Gaps = 55/250 (22%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY     +  L +Y +     +
Sbjct: 35  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSHDGEWLAYVKGKKQGSLELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 +++ D++        +T F N+SA 
Sbjct: 86  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLHTFDVEKK------DTDFENVSAG 135

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD  +    S+       +     G+    + +D   +               
Sbjct: 136 VGDYAWYPDGKKFFVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 191

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPT 396
                      WSP    I+F       +S +   + +++ DGS+ E++     N Q   
Sbjct: 192 DFLALVASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDPMLLNTQWFK 251

Query: 397 WSPSGRSLIF 406
           W+P+   L +
Sbjct: 252 WAPANNILAY 261



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAF +       + + K DG +E+ L +   +  P WS  G  L + + K      +LY
Sbjct: 30  KIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSHDGEWLAYVKGKK-QGSLELY 82

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 83  RLK-DGKKVTPFHS--EASNYQWSP 104


>gi|301511011|ref|ZP_07236248.1| SMP-30/Gluconolaconase/LRE-like region family protein
           [Acinetobacter baumannii AB058]
          Length = 292

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 10/158 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQI----LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           L  +D D  N++++      +    L + R     + V  +    ED     L     D 
Sbjct: 75  LYQLDFDTGNLKFICNPEPDLPQNRLNDGRVDRQGRFVFGSMNRLEDGNTASLYRLDADY 134

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +++ N  +   +  +S +G +   +      +  Y  DL++      T    I+ S  
Sbjct: 135 KIEKLENNINTSNSICWSPDGAKLYFADTWQGEIWSYDYDLETGQISNKTIFCKIDTSDG 194

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            S D S +    DREG   L+  +       R   D +
Sbjct: 195 GSADGSTV----DREGY--LWNAKVYSGQLVRYRPDGQ 226



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 83/256 (32%), Gaps = 48/256 (18%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL--RVYLMDTRIDRAPKRIGNFRSMI 260
           I+ L   + ++   P +   +Q++ +    D  +     +  + R     K+IG+F    
Sbjct: 3   IKVLVDVKTKLGECPTWDAVRQRLFWVDIVDGRLFCCDEFGGNIRAWEVHKKIGSFALQ- 61

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS-----Q 315
                  +     I   +D    +Y +D  +   + +      ++  +   D       +
Sbjct: 62  -------DNYNGAIVALEDG---LYQLDFDTGNLKFI-CNPEPDLPQNRLNDGRVDRQGR 110

Query: 316 IVFESD---REGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            VF S     +G    LY + ++   +K   ++   +     WSP G  + F      + 
Sbjct: 111 FVFGSMNRLEDGNTASLYRLDADYKIEKL--ENNINTSNSICWSPDGAKLYFADTWQGEI 168

Query: 372 AIGVMKKDGSQE-------RLLVEDSNLQAPTWSPSGRSLIFSRKKDGD------TGSKL 418
                  +  Q        ++   D        S  G ++     ++G          +L
Sbjct: 169 WSYDYDLETGQISNKTIFCKIDTSDGG------SADGSTV----DREGYLWNAKVYSGQL 218

Query: 419 YSIDLNGRNETLINTP 434
                +G+ + +I  P
Sbjct: 219 VRYRPDGQIDRIIEMP 234


>gi|300772773|ref|ZP_07082643.1| OmpA family outer membrane protein [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300761076|gb|EFK57902.1| OmpA family outer membrane protein [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 628

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 73/246 (29%), Gaps = 39/246 (15%)

Query: 215 FEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSNG 269
           + P+ + + + + +   T + E+    +       +A K  G+  S      A   S +G
Sbjct: 171 YFPKLTADNRTIIFTRKTANQENFYESHNDGKVWSQAQKLTGHINSDQFNEGAHCISPDG 230

Query: 270 KRALISV----QKDEAMDIYSVDLQSN---ATERL---TNTLFINISASYSPDSSQIVFE 319
           K    +         + DIY    ++        L    N+       + S D   + F 
Sbjct: 231 KYLFFTGCNWPNGMGSCDIYISKKENGIWGEPYNLGAPINSKGWESQPAISADGRTLYFV 290

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEA---------SYFDPVWSPQGDLIAFTKFSGEK 370
           S+R G    Y +  +  + K                     P        + F       
Sbjct: 291 SNRPGGVGGYDIWKSTLNAKEEWSVPVNLGPQINTIFDESAPYIHADNSSLFFASNGWPG 350

Query: 371 F---AIGVMKKDGSQERLLVEDSNLQAP----------TWSPSGRSLIFSRKKDGDTGSK 417
           F    I + K D        +  NL  P            S +G+    S + DG     
Sbjct: 351 FGRKDIFISKSD--SLNKWSDPVNLGHPINNYYEQNALYVSMNGKMGFLSTQIDGQQQLD 408

Query: 418 LYSIDL 423
           +YS D+
Sbjct: 409 IYSFDI 414


>gi|149376319|ref|ZP_01894082.1| hypothetical protein MDG893_05289 [Marinobacter algicola DG893]
 gi|149359333|gb|EDM47794.1| hypothetical protein MDG893_05289 [Marinobacter algicola DG893]
          Length = 901

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/198 (13%), Positives = 64/198 (32%), Gaps = 42/198 (21%)

Query: 218 RFSPNQQKVAYATY---------DDEDILRVYLMDTRIDRAPKRI----GNFRSMILAPR 264
             S +  +  +A           D++    ++  D       + I           +AP 
Sbjct: 132 TVSYDGTRALFAMRAPEIEDVDEDEQPTWNIWEYDVTSGTLRRVIESEVTAEAGQDIAPA 191

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +  +G R + S  +        +D +            ++             F      
Sbjct: 192 YLPDG-RIVFSSTRQRISRAILLD-EGKP-----QYPALDEE------REVPAFV----- 233

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVMKK 378
              L+VM  +G + ++I+ ++     DP+ + +G  I F+++       G  F +  +  
Sbjct: 234 ---LHVMDDDGENIEQITFNQSHDL-DPLVTDEGT-IVFSRWDNAGQTQGNGFNLYKVNP 288

Query: 379 DGSQERLLVEDSNLQAPT 396
           DG+    L    +  + +
Sbjct: 289 DGTGLSYLYGRHSHGSVS 306


>gi|296104513|ref|YP_003614659.1| oligogalacturonide lyase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295058972|gb|ADF63710.1| oligogalacturonide lyase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 391

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 90/253 (35%), Gaps = 33/253 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F  +   + +A   D      YL+D +   A +              S +  R
Sbjct: 36  NYFYQKCFFNDGSHLLFAGAFDGH-WNYYLLDLQNAEAVQLTEGAGDNTFGGFLSPD-DR 93

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL-------------------TNTLFINISAS-YSP 311
           A   V+ D    +  V L++ A   +                   T+ + I I+   ++P
Sbjct: 94  AFYYVKNDRT--LLEVSLETRAEREVYRVPDDWVGYGTWVANSDCTSLVGIEIAKRDWTP 151

Query: 312 DSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGE 369
            +   +F           +++ +  + +  I  +++     P++ P     +AF      
Sbjct: 152 LNDWQIFHDFFHKGPHCRLLRVDLKTGESSIIHEEKKWLGHPIYRPFDDHTVAFCHEGPH 211

Query: 370 KF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 + ++ +DG+  R +   +  ++ T   W P G +L++     G  G  +   D 
Sbjct: 212 DLVDARMWLVNEDGTDIRKVKTHAQGESCTHEFWVPDGSALVYVSYLKGQQGRSICRFDP 271

Query: 424 -NGRNETLINTPA 435
             G NET++  P+
Sbjct: 272 QTGVNETIMQMPS 284



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 65/190 (34%), Gaps = 38/190 (20%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG +IR + T ++ +      + P+   + Y +
Sbjct: 197 PFDDHTVAFCHEGPHDLVDARMWLVNEDGTDIRKVKTHAQGESCTHEFWVPDGSALVYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---------------I 274
           Y      R +   D +       +       L   F  +G   +                
Sbjct: 257 YLKGQQGRSICRFDPQTGVNETIMQMPSCSHLMSNF--DGTLLVGDGSGTPVDVKDTHGY 314

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINIS--------------ASYSPDSSQIVFES 320
           ++  D    +Y+ D+      R+      + S               S++PD   ++F S
Sbjct: 315 TIDND--PYLYAFDVAKKRYYRIARH---DTSWATVENSRQVTHPHPSFTPDEKAVLFSS 369

Query: 321 DREGKEQLYV 330
           D++GK  LY+
Sbjct: 370 DKDGKPALYI 379



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/276 (12%), Positives = 74/276 (26%), Gaps = 51/276 (18%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILRV 239
              V    +     V + D         S   I    R ++P      +  +  +     
Sbjct: 117 VYRVPDDWVGYGTWVANSD-------CTSLVGIEIAKRDWTPLNDWQIFHDFFHKGPHCR 169

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---MDIYSVDLQSNATE 295
            L           I   +  +  P +   +        +         ++ V+       
Sbjct: 170 LLRVDLKTGESSIIHEEKKWLGHPIYRPFDDHTVAFCHEGPHDLVDARMWLVNEDGTDIR 229

Query: 296 RL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFD 351
           ++ T+    +     + PD S +V+ S  +G++   +          + I Q    S+  
Sbjct: 230 KVKTHAQGESCTHEFWVPDGSALVYVSYLKGQQGRSICRFDPQTGVNETIMQMPSCSHLM 289

Query: 352 PVWSPQGDLI--------------------------AFTKFSGEKFAIGVMK---KDGSQ 382
             +   G L+                          AF       + I            
Sbjct: 290 SNF--DGTLLVGDGSGTPVDVKDTHGYTIDNDPYLYAFDVAKKRYYRIARHDTSWATVEN 347

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            R +        P+++P  ++++FS  KDG     +
Sbjct: 348 SRQVTHP----HPSFTPDEKAVLFSSDKDGKPALYI 379



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 70/210 (33%), Gaps = 22/210 (10%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           P  +   R+      F ++G   L +   D   + Y +DLQ+    +LT     N    +
Sbjct: 28  PPEVTCHRNYFYQKCFFNDGSHLLFAGAFDGHWNYYLLDLQNAEAVQLTEGAGDNTFGGF 87

Query: 310 -SPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPV------------- 353
            SPD     +  +     ++ +      +  R+        ++                 
Sbjct: 88  LSPDDRAFYYVKNDRTLLEVSLETRAEREVYRVPDDWVGYGTWVANSDCTSLVGIEIAKR 147

Query: 354 -WSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSP-SGRSLIFSR 408
            W+P  D   F  F   G    +  +     +  ++ E+      P + P    ++ F  
Sbjct: 148 DWTPLNDWQIFHDFFHKGPHCRLLRVDLKTGESSIIHEEKKWLGHPIYRPFDDHTVAFCH 207

Query: 409 KKDGDT-GSKLYSIDLNGRNETLINTPAYA 437
           +   D   ++++ ++ +G +   + T A  
Sbjct: 208 EGPHDLVDARMWLVNEDGTDIRKVKTHAQG 237


>gi|300775757|ref|ZP_07085618.1| possible dipeptidyl-peptidase IV [Chryseobacterium gleum ATCC
           35910]
 gi|300505784|gb|EFK36921.1| possible dipeptidyl-peptidase IV [Chryseobacterium gleum ATCC
           35910]
          Length = 712

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 66/173 (38%), Gaps = 13/173 (7%)

Query: 272 ALISVQKDEAM-DIYSVDLQSNATERL---TNTLFINI-SAS--YSPDSSQIVFESDREG 324
            LI+ ++ +   DI  V+ ++ A ++L   T+  +I+  S +  +  D    ++ S+R+G
Sbjct: 277 VLITSERIQNASDILKVNTKTGAVQKLFTETDDKWIDTDSPTLEFLED-DSFLWASERDG 335

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQ 382
              LY    +G  +K+I++          ++P+   I             I  +  +  +
Sbjct: 336 NRHLYWYDKDGKLKKQITKGNWEVTDYYGFNPKSKEIYVQTTEKGSINKVISKVNIENGK 395

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTP 434
            +L+       +  +S +     F            Y + D NG+    +   
Sbjct: 396 TQLISNAEGNNSANFSKN--YNYFIETSSTAARPYTYVLKDGNGKTVKELQNN 446



 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 43/138 (31%), Gaps = 35/138 (25%)

Query: 265 FSSNGKRALISVQKDEAMDIY---------SVDLQSNATERLTNTLFINISASYSPDSSQ 315
           FS +  + L+ +    +  IY           DL+S     L     +    ++SPD+++
Sbjct: 84  FSDDESKILLQL---GSQPIYRHSFLGKFDVKDLKSGKVISLNEGKPVQ-EPTFSPDATK 139

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDK-----------------EASYFDPVWSPQG 358
           + F SD      L+          +I+ D                          W+   
Sbjct: 140 VAFISD----NNLFYQDLGSGKITQITTDGKKNSILNGLADWVYEEEFGHARQYEWTKNS 195

Query: 359 DLIAFTKFSGEKF-AIGV 375
           D I F K    +   I +
Sbjct: 196 DAIVFVKSDESQVPEIYI 213



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 35/111 (31%), Gaps = 19/111 (17%)

Query: 346 EASYFDPVWSPQGDLI--------AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +  +   ++S     I         +      KF   V      +   L E   +Q PT+
Sbjct: 76  DGKFESYIFSDDESKILLQLGSQPIYRHSFLGKFD--VKDLKSGKVISLNEGKPVQEPTF 133

Query: 398 SPSGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           SP    + F              K+  I  +G+  +++N  A      WV 
Sbjct: 134 SPDATKVAFISDNNLFYQDLGSGKITQITTDGKKNSILNGLAD-----WVY 179


>gi|154320558|ref|XP_001559595.1| hypothetical protein BC1G_01751 [Botryotinia fuckeliana B05.10]
 gi|150853440|gb|EDN28632.1| hypothetical protein BC1G_01751 [Botryotinia fuckeliana B05.10]
          Length = 750

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 6/104 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ +++A  + D      + L D+      K +      I A  FS + K+   S  
Sbjct: 518 TFSPDGKQIASGSNDK----TIKLWDSINGNLRKTLIGHTGEITAIAFSPDDKQIA-SGS 572

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            D  + ++   +  N  + L        + ++SPD  QI   S+
Sbjct: 573 NDRTIKLWD-SINGNLRKTLIGHTGEITAIAFSPDDKQIASGSN 615



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 42/122 (34%), Gaps = 5/122 (4%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +   ++ + +    FS +GK+   S   D+ + ++   +  N  + L        
Sbjct: 500 WSAPIEMYTDYSNRVRIITFSPDGKQIA-SGSNDKTIKLWD-SINGNLRKTLIGHTGEIT 557

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + ++SPD  QI   S+      + +  S   + ++             +SP    IA   
Sbjct: 558 AIAFSPDDKQIASGSN---DRTIKLWDSINGNLRKTLIGHTGEITAIAFSPDDKQIASGS 614

Query: 366 FS 367
             
Sbjct: 615 ND 616



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 41/106 (38%), Gaps = 5/106 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG    ++ + D    N+R         +    FSP+ +++A  + D      + L
Sbjct: 524 KQIASGSNDKTIKLWDSINGNLRKTLIGHTGEITAIAFSPDDKQIASGSNDR----TIKL 579

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            D+      K +      I A  FS + K+   S   D  + ++ +
Sbjct: 580 WDSINGNLRKTLIGHTGEITAIAFSPDDKQIA-SGSNDRTIKLWDI 624



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 38/116 (32%), Gaps = 11/116 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD  QI   S+    + + +  S   + ++             +SP    IA     
Sbjct: 518 TFSPDGKQIASGSN---DKTIKLWDSINGNLRKTLIGHTGEITAIAFSPDDKQIASGSND 574

Query: 368 GEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                I +        R  L+     + A  +SP  + +        D   KL+ I
Sbjct: 575 RT---IKLWDSINGNLRKTLIGHTGEITAIAFSPDDKQIA---SGSNDRTIKLWDI 624


>gi|134099100|ref|YP_001104761.1| WD-40 repeat-containing protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|291008921|ref|ZP_06566894.1| WD-40 repeat-containing protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|133911723|emb|CAM01836.1| WD-40 repeat protein [Saccharopolyspora erythraea NRRL 2338]
          Length = 1213

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/294 (15%), Positives = 103/294 (35%), Gaps = 53/294 (18%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
            +    R   +  +WD   R +I       +          I+D           +F  +
Sbjct: 679 KRLAAGRENGQIEVWDTTGRVRIAATSGTGA---------RITDV----------EFTGQ 719

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           IL V+    + +      +  R G       P     ++E   SP+ + +A AT +    
Sbjct: 720 ILAVA--RGTTVELWDTALRQRTGE-----LPGGFGTVWELALSPDGRTLALATDNG--- 769

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + L D   +     +   R  +    FS +G R   + + D ++ ++ +      + R
Sbjct: 770 --IVLWDLGTNTRLPELPQPRGPVNEVAFSPDGSRIA-AARPDLSLSMWEL----TGSRR 822

Query: 297 LTNTLFINI---SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDP 352
            T    + +     +++PD   ++  S       + +   +   Q+R +   +     D 
Sbjct: 823 TTGFPGVTVPVSGLAFAPDGRTLLSASF---DNTVTLWDGDRPGQRRTLLATEPGGLTDI 879

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLI 405
             S  G + A ++ +  ++ +          RL +      AP T++P G +L+
Sbjct: 880 AASRDGSIAAMSRDAILRWEMA---------RLPLAAPESSAPITYTPDGSALV 924



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 53/190 (27%), Gaps = 22/190 (11%)

Query: 192  SLCVMDRDGANI-----RYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMD 243
             L V D +G  I     R    S       P     SP+ +++A       +   + + D
Sbjct: 998  QLAVADTEGTRIWNVAQRRPVTSLKGYPGRPSALDLSPDGRRLA----AGGEGDVLMVWD 1053

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLF 302
                +      +   +   P F+ +GK   +       +       +  +   RL   + 
Sbjct: 1054 VASGQRVAEEADTWGL---PTFAPDGKHLAVFGYSGATLWDPENSSRGISGFTRLGRGML 1110

Query: 303  INISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             + S +   +SPD     F +       + +                       W+  G 
Sbjct: 1111 ADSSPATTAFSPDGR---FLAAAGENNTVVLFDVVNGGPWATLTGHTGPVHSLAWNHDGS 1167

Query: 360  LIAFTKFSGE 369
             +A     G 
Sbjct: 1168 RLATAGGDGT 1177



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 57/193 (29%), Gaps = 18/193 (9%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              S +  ++A A     D     + +    R    +  +     A   S +G+R      
Sbjct: 991  ALSADGAQLAVA-----DTEGTRIWNVAQRRPVTSLKGYPGRPSALDLSPDGRRLA---A 1042

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              E   +   D+ S   +R+          +++PD   +           L+  +++   
Sbjct: 1043 GGEGDVLMVWDVASG--QRVAEEADTWGLPTFAPDGKHLAVFGYSGAT--LWDPENSSRG 1098

Query: 338  QKRISQDKEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                ++         S     +SP G  +A    +       V+   G    L      +
Sbjct: 1099 ISGFTRLGRGMLADSSPATTAFSPDGRFLAAAGENNTVVLFDVVN-GGPWATLTGHTGPV 1157

Query: 393  QAPTWSPSGRSLI 405
             +  W+  G  L 
Sbjct: 1158 HSLAWNHDGSRLA 1170



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 71/233 (30%), Gaps = 23/233 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + +G     + V D  G      T      + +  F    Q +A A         V L
Sbjct: 679 KRLAAGRENGQIEVWDTTGRVRIAATSGTGARITDVEF--TGQILAVA-----RGTTVEL 731

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            DT + +    +      +     S +G+   ++   D  + ++ +   +   E L    
Sbjct: 732 WDTALRQRTGELPGGFGTVWELALSPDGRTLALAT--DNGIVLWDLGTNTRLPE-LPQPR 788

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGD 359
                 ++SPD S+I        +  L +     +  +R +     +       ++P G 
Sbjct: 789 GPVNEVAFSPDGSRIA-----AARPDLSLSMWELTGSRRTTGFPGVTVPVSGLAFAPDGR 843

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRK 409
            +    F      + +   D   +R      E   L     S  G     SR 
Sbjct: 844 TLLSASFDNT---VTLWDGDRPGQRRTLLATEPGGLTDIAASRDGSIAAMSRD 893



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 74/222 (33%), Gaps = 24/222 (10%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           AY  YD  +     L  +            +S   A  FS +G       Q + A+  + 
Sbjct: 597 AYHAYDTPETRSTVL--SLAGHPNNHGELRQSGTSALAFSPDGAVLATGGQGELALWSHR 654

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
             +    + + T       +  ++PD  ++   + RE   Q+ V  + G  +   +    
Sbjct: 655 TRIAELGSPQETAAYS---ALGFAPDGKRLA--AGRE-NGQIEVWDTTGRVRIAATSGTG 708

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGR 402
           A   D  ++  G ++A  +  G    +     D +  +   E        W    SP GR
Sbjct: 709 ARITDVEFT--GQILAVAR--GTTVELW----DTALRQRTGELPGGFGTVWELALSPDGR 760

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +L  +     D G  L+ +  N R   L       ++  +  
Sbjct: 761 TLALAT----DNGIVLWDLGTNTRLPELPQPRGPVNEVAFSP 798


>gi|294506973|ref|YP_003571031.1| hypothetical protein SRM_01158 [Salinibacter ruber M8]
 gi|294343301|emb|CBH24079.1| conserved hypothetical protein [Salinibacter ruber M8]
          Length = 400

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 82/229 (35%), Gaps = 26/229 (11%)

Query: 218 RFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            + PNQ+++A   Y   DD       L     D   + +G      +   +  +G     
Sbjct: 130 AWHPNQERLAVGYYRPTDDGGRGPGGLQVVTPDGTTRDVGCSSVREVL-HWLPDG----- 183

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQL- 328
           S+      ++Y VD   +   + +  +       Y+P   Q+ +     E DR+  E + 
Sbjct: 184 SLAARTDDNLYVVDA-GDCATQASLDIRRMHHLRYAPTGQQMAYIHRELEYDRDRGEYVP 242

Query: 329 ---YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
              +V+              E       W+P  + +A            V+  DGS+   
Sbjct: 243 DSSFVLSGPDGTNPETLFGNERHARHHRWAPGTNEVALDVRVEASGHRQVVVYDGSRPTF 302

Query: 386 LV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           LV      ++   P WSPSG  + F+ + D  + +   ++ + G+   L
Sbjct: 303 LVSPDQTTADQVHPRWSPSGNRIAFTLRSDASSQA---AVRVKGQTRRL 348



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/222 (13%), Positives = 70/222 (31%), Gaps = 27/222 (12%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--T 298
           ++        + +    +   A   S +G+    S    ++  +  +DL +  T R+   
Sbjct: 61  VLHDARTDESRTLAAGATAKPARAVSPSGRHLAFSYATADSSHLTLLDLTTQQTHRVHAA 120

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP------ 352
               +  S ++ P+  ++     R   +            + ++ D              
Sbjct: 121 AGTSVAYSLAWHPNQERLAVGYYRPTDDG----GRGPGGLQVVTPDGTTRDVGCSSVREV 176

Query: 353 -VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS---- 407
             W P G L A T        + V+       +  ++   +    ++P+G+ + +     
Sbjct: 177 LHWLPDGSLAART-----DDNLYVVDAGDCATQASLDIRRMHHLRYAPTGQQMAYIHREL 231

Query: 408 ---RKKDGDTGSKLYSIDL-NGRN-ETLINTPAYASDPQWVG 444
              R +        + +   +G N ETL     +A   +W  
Sbjct: 232 EYDRDRGEYVPDSSFVLSGPDGTNPETLFGNERHARHHRWAP 273



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 64/188 (34%), Gaps = 16/188 (8%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
             R++ H     +  + TG++  +  R L         +  +S  +   DG N   L   
Sbjct: 208 DIRRMHH-----LRYAPTGQQMAYIHRELEYDRDRGEYVPDSSFVLSGPDGTNPETLF-G 261

Query: 210 RDQILFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            ++     R++P   +VA     +     +V + D              +  + PR+S +
Sbjct: 262 NERHARHHRWAPGTNEVALDVRVEASGHRQVVVYDGSRPTFLVSPDQTTADQVHPRWSPS 321

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G R   +++ D +            T RL           +  D S +V      G + +
Sbjct: 322 GNRIAFTLRSDASSQAAV--RVKGQTRRLGRVDGAVWG--WLDDRSVVV-----PGPDSV 372

Query: 329 YVMQSNGS 336
            V   NG+
Sbjct: 373 RVKALNGT 380


>gi|302539596|ref|ZP_07291938.1| putative WD-40 repeat protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302457214|gb|EFL20307.1| putative WD-40 repeat protein [Streptomyces himastatinicus ATCC
            53653]
          Length = 1262

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/308 (16%), Positives = 96/308 (31%), Gaps = 49/308 (15%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP---------- 217
            GE G F    L    +  +  +  S      DG  +     +R      P          
Sbjct: 964  GENGPFLPMSLSADGNRFAYGLDKSPIPHGADGIRVWDTRRNRQVTALTPGDADFEFMAV 1023

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMD----TRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
              SP+ ++V   T D E+ ++V+        R    P R      +      S++G + L
Sbjct: 1024 ALSPDGREV--MTTDAENRVKVWDTHSGKRLRTLPKPNRGNRDEQVQEIGALSADGTKLL 1081

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINIS--------ASYSPDSSQIVFESDREGK 325
                             + A  R+++   +            ++SPD+ +I   +  +GK
Sbjct: 1082 ---------------TDTGALIRVSDGKTLPDELGECQDCVFAFSPDARRIAVAATYQGK 1126

Query: 326  EQLY------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
              L+       + +      R +           +SP G  +A     G      V  + 
Sbjct: 1127 VSLWDGTLRTPLGTLSGTLSRATHGAREVPTAMAFSPDGTTLAVAGEQGTLQLWDVASQQ 1186

Query: 380  GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                 L     ++ +  +SP G +L            + Y ID +   +T+      +  
Sbjct: 1187 PLGPTLRTPGDSILSLAFSPDGGTLY---AAGEHVPWQKYDIDPDRAVDTVCARAGTSLS 1243

Query: 440  PQ-WVGFM 446
            P  W  F+
Sbjct: 1244 PADWNRFL 1251



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/231 (15%), Positives = 65/231 (28%), Gaps = 71/231 (30%)

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----------SYSPD 312
             FS++G    ++     A     +  +S  T  L N   +  SA           S S D
Sbjct: 920  TFSADGSTLALAHAGARADHFTLLHARSGKT--LANVPGLERSAQAGENGPFLPMSLSAD 977

Query: 313  SSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFT-- 364
             ++  +  D+     G + + V  +  + Q       +A   +     SP G  +  T  
Sbjct: 978  GNRFAYGLDKSPIPHGADGIRVWDTRRNRQVTALTPGDADFEFMAVALSPDGREVMTTDA 1037

Query: 365  ------------------------KFSGEKFAIGVMKKDGSQERLLVEDS---------- 390
                                        +   IG +  DG+  +LL +            
Sbjct: 1038 ENRVKVWDTHSGKRLRTLPKPNRGNRDEQVQEIGALSADGT--KLLTDTGALIRVSDGKT 1095

Query: 391  --------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                          +SP  R +  +    G     L+    +G   T + T
Sbjct: 1096 LPDELGECQDCVFAFSPDARRIAVAATYQGKV--SLW----DGTLRTPLGT 1140



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 70/204 (34%), Gaps = 20/204 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-----LAPRFSSNGKRAL 273
           F  +  +  +   ++E   R+ + D    R      +          + P+ S +G    
Sbjct: 615 FLSDGGR-TFTRIENEK-RRITVWDAETGRVTGTYPSVPGHTDPEAFVPPQHSPDGATLA 672

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYV 330
           +       + ++  D+++            + +A    +S     + F +D  G   + V
Sbjct: 673 VPTGAGMQVRLW--DIRAGRYRSPAFGPSRSATAFLMGFSSSGRAMFFSADDRG---IEV 727

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED- 389
             +    ++ +S            S  G L+A+     +   +  M++D   +   +   
Sbjct: 728 WDTRTG-RRLLSAPDAPQAVAADVSADGRLLAYCT-EDDHVELRDMRQDRRPDAKWITKM 785

Query: 390 --SNLQAPTWSPSGRSLIFSRKKD 411
             S LQ   +SP G +L  + ++ 
Sbjct: 786 PCSTLQYIQFSPDGHTLAVADEQG 809



 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 69/197 (35%), Gaps = 32/197 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L  +           PSR    F   FS + + + ++  D      + + DTR     +
Sbjct: 682 RLWDIRAGRYRSPAFGPSRSATAFLMGFSSSGRAMFFSADDRG----IEVWDTRTG---R 734

Query: 252 RIGNFR--SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-- 307
           R+ +       +A   S++G+      + D       V+L+    +R  +  +I      
Sbjct: 735 RLLSAPDAPQAVAADVSADGRLLAYCTEDDH------VELRDMRQDRRPDAKWITKMPCS 788

Query: 308 -----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +SPD   +   +D +G  +  +  S+G +   + Q     Y    +S  G  +A
Sbjct: 789 TLQYIQFSPDGHTLA-VADEQGLRRWRL--SSGKELPMLRQTGPERY---AFSDDGKFVA 842

Query: 363 FTKFSGEKFAIGVMKKD 379
                  +  I + + D
Sbjct: 843 ----GAGRNEILLWRLD 855



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 60/200 (30%), Gaps = 31/200 (15%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQK 278
           S + + +AY T DD   LR    D R D   K I       L   +FS +G    ++ ++
Sbjct: 751 SADGRLLAYCTEDDHVELRDMRQDRRPDA--KWITKMPCSTLQYIQFSPDGHTLAVADEQ 808

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                  S          L  T       ++S D   +       G+ ++ + + +    
Sbjct: 809 GLRRWRLS---SGKELPMLRQTGPERY--AFSDDGKFVA----GAGRNEILLWRLDRPQA 859

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVEDS 390
                     Y      P G  +  +          +G +  +  +       R +    
Sbjct: 860 PVFRHALADEYGV----PGGIELDMSSRAIRYIGSGTGTRPVVHTLDL----VRSITSSW 911

Query: 391 NL---QAPTWSPSGRSLIFS 407
                   T+S  G +L  +
Sbjct: 912 RAQPLNNATFSADGSTLALA 931


>gi|213402819|ref|XP_002172182.1| hir-1 [Schizosaccharomyces japonicus yFS275]
 gi|212000229|gb|EEB05889.1| hir-1 [Schizosaccharomyces japonicus yFS275]
          Length = 918

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 77/235 (32%), Gaps = 38/235 (16%)

Query: 203 IRYLTPSRDQILFEPRFS----PNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRI---G 254
             +L    D+      FS    P+  ++     D    I     +       PK++    
Sbjct: 6   PSWLGHFDDRGHRLSVFSIHVHPDGSRIVTGGLDGTVRIWSTKALYEEDKGLPKQLCCMS 65

Query: 255 NFRSMILAPRFSSNGK--------RALISVQKDEA-MDIYSVDLQS-------NATERLT 298
                + + RFS NG+        R +I   KD++   + ++   +        +  RLT
Sbjct: 66  THTGTVTSVRFSPNGQFLASGSDDRVVIVWHKDDSVPGLRTIFGSTETNSENWRSFRRLT 125

Query: 299 NTLFINISASYSPDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                     +S DS  +V           +    E+L  ++++ S  K I+ D    YF
Sbjct: 126 GHDNDIQDLCWSHDSQLLVSVGLDSSIIVWNGNTFERLKRIEAHQSHVKGITFDPAGKYF 185

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
               S    +  +           +   + S        +  + P+WSP G+ + 
Sbjct: 186 ATE-SDDRTIKVWRTTDFALEKTIIQPFNNSPL-----STYFRRPSWSPDGKYIA 234


>gi|304408322|ref|ZP_07389970.1| TolB domain-containing protein [Paenibacillus curdlanolyticus YK9]
 gi|304342791|gb|EFM08637.1| TolB domain-containing protein [Paenibacillus curdlanolyticus YK9]
          Length = 442

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 75/240 (31%), Gaps = 37/240 (15%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V             +       PR+S + + +AY         ++ +++       + 
Sbjct: 63  LWVKRAGQEQQLAPGGTGAAAARYPRWSSDGKWLAYTRGAMSSNQQLRVIERSKGVELQV 122

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSP 311
                       +S +  R     Q      ++ VD  S +    +   +      ++ P
Sbjct: 123 AQQVDRF----AWSPDKNRLAYLRQG----ILFVVDAASPDKPAEIAREMSN---FAWLP 171

Query: 312 DSSQIV-------------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----- 353
           D S ++             +   R  +  +    S G      +  +++  F  V     
Sbjct: 172 DGSGLLASTQSKLLDGESNWTRVRLLQIPISAAGSAGPAVTLYTLPEQSDAFFAVGTSTF 231

Query: 354 -WSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIF 406
            WS  G  IAF        S +   + V+  DG   R + E  N +    WSP G SL +
Sbjct: 232 KWSANGRWIAFLATPTASLSADGNTLCVLSADGKVFRKVDEMVNHEQWIQWSPEGESLAY 291



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 81/258 (31%), Gaps = 47/258 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP++ ++AY          ++++D      P  I    S      +  +G   L S Q
Sbjct: 130 AWSPDKNRLAYLRQGI-----LFVVDAASPDKPAEIAREMSNF---AWLPDGSGLLASTQ 181

Query: 278 K---DEAMD-------IYSVDLQSNATERLT---------NTLFINISAS-YSPDSSQIV 317
               D   +          +    +A   +T             +  S   +S +   I 
Sbjct: 182 SKLLDGESNWTRVRLLQIPISAAGSAGPAVTLYTLPEQSDAFFAVGTSTFKWSANGRWIA 241

Query: 318 F-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--- 369
           F      S       L V+ ++G   +++ +      +   WSP+G+ +A+    G    
Sbjct: 242 FLATPTASLSADGNTLCVLSADGKVFRKVDEMVNHEQW-IQWSPEGESLAYIGGVGREAT 300

Query: 370 -KFAIGVM-KKDGSQERLLVEDSNL-QAPTWSPSGRSL-------IFSRKKDGDTGSKLY 419
               + V+ K D  Q  +           TW+ +   +        FS          L 
Sbjct: 301 TNKQLRVLAKPDAGQPTVYTPQGKAAGDFTWNGANSIIVSQAAEQAFSSDPKKRPRPSLV 360

Query: 420 SIDLNGRNETLINTPAYA 437
            +DL    +  + TP   
Sbjct: 361 VVDLTSGKQLPLTTPTGG 378



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 59/162 (36%), Gaps = 17/162 (10%)

Query: 289 LQSNATERLTNTLFI-NISASYSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQ 343
           + + AT+ +TN +      A    +       SD    R G   L+V ++    Q     
Sbjct: 21  MGTTATKAVTNGIGAAQAEAVLPSNGGPKRIVSDAAFIRGGG--LWVKRAGQEQQLAPGG 78

Query: 344 DKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
              A+   P WS  G  +A+T+ +      + V+++    E  + +  +  A  WSP   
Sbjct: 79  TGAAAARYPRWSSDGKWLAYTRGAMSSNQQLRVIERSKGVELQVAQQVDRFA--WSPDKN 136

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            L + R+        L+ +D     +         S+  W+ 
Sbjct: 137 RLAYLRQ------GILFVVDAA-SPDKPAEIAREMSNFAWLP 171


>gi|281200541|gb|EFA74759.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 2401

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/232 (18%), Positives = 82/232 (35%), Gaps = 17/232 (7%)

Query: 184  VVSGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V S     ++ V + D   + Y +  +  + +   +FSP    +     DD         
Sbjct: 1818 VASTSEDRTVRVANIDTGKLEYEIPNAHIETINSVQFSPTTPGLLITASDDFSCKV---- 1873

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                 +    + N  + +    FS NG     +V +D ++ IY          ++T    
Sbjct: 1874 -WSFGKLVATLSNNTNTVKQAVFSPNGAYIA-TVSRDCSITIY-YTSGYKMICKMTGHTD 1930

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 ++SPDS +++          + +   N   + R  +    S     ++P    I 
Sbjct: 1931 WINFVTFSPDSKRLI---SGGWDFNVKIWSMNSKKELRTLKGHTGSVERGFFTPDSRYII 1987

Query: 363  FTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
               F G    I V   + GS+   L   S + +   S +G+  IFS   DG+
Sbjct: 1988 TCSFDGT---IKVWDPEVGSEITSLSHQSRI-SDVIS-NGKQSIFSCSDDGE 2034



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 59/363 (16%), Positives = 119/363 (32%), Gaps = 57/363 (15%)

Query: 102  DWNSLGAQVLV-----TGRVIKEGKDRLRVEF-RLWDVKDRKQIIGKKFFSSPASWRKIA 155
             W+  G Q++      T RV             +  DV    +   K    SP S + IA
Sbjct: 1628 AWSKEGGQLVSCSWDGTVRVWNPSDSLYNKRLLQTIDVSATVRGSLKCCEFSPNSKQIIA 1687

Query: 156  HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
              +   +          F+ +   +   +       + C   +DG++    +      ++
Sbjct: 1688 TAMDSSVL--------LFDIQASKLVSIIGKHNKSVNYCSFSQDGSHFVTSSDDSTMKIW 1739

Query: 216  EP-------------------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-----K 251
             P                    +SPN   +A    D   ++R+Y +     ++      +
Sbjct: 1740 TPTLGAQLDSLKFQEGWANCLAYSPNADTMAAGCSDC--VVRIYSVSPPSGKSTGIKLLR 1797

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
             I      IL+  FS++GK         E   +   ++ +   E       I    S  +
Sbjct: 1798 EIAGHTRAILSVSFSNDGK---FVASTSEDRTVRVANIDTGKLEYEIPNAHIETINSVQF 1854

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            SP +  ++  +  +   +++     G     +S +   +    V+SP G  IA       
Sbjct: 1855 SPTTPGLLITASDDFSCKVWSF---GKLVATLSNNTN-TVKQAVFSPNGAYIATVSRD-- 1908

Query: 370  KFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              +I +    G +   ++      +   T+SP  + LI       D   K++S++     
Sbjct: 1909 -CSITIYYTSGYKMICKMTGHTDWINFVTFSPDSKRLI---SGGWDFNVKIWSMNSKKEL 1964

Query: 428  ETL 430
             TL
Sbjct: 1965 RTL 1967


>gi|50294333|ref|XP_449578.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49528892|emb|CAG62554.1| unnamed protein product [Candida glabrata]
          Length = 806

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 73/220 (33%), Gaps = 27/220 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +   +    Y      R    +T        +      + +  FS +    L+S  +
Sbjct: 500 WSLDGSSLINPKYSSSQFDRFSQDNTCST-----LVGHSGTVYSTSFSPD-NMYLVSGSE 553

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASY----SPDSSQIVFESDREGKEQLYVMQSN 334
           D+ + ++S+D  +     L N    N    +    SP        S  +   +L+     
Sbjct: 554 DKTVKLWSMDTHTA----LVNYKGHN-HPVWDVKFSPLGHYFASASH-DQTARLWACDHI 607

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                RI            + P G  + FT  S +   +  +    S    L   + + +
Sbjct: 608 Y--PLRIFAGHTNDVDTVSFHPNGCYV-FTGSSDKTCRMWDVSTGDSVRLFLGHTAPVLS 664

Query: 395 PTWSPSGRSLIFSRKKDG-------DTGSKLYSIDLNGRN 427
              SP GR L  +  +DG        TG ++  +  +G+N
Sbjct: 665 TQVSPDGRWLA-TGSEDGVICLWDIGTGKRIKQMRGHGKN 703



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 59/183 (32%), Gaps = 14/183 (7%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N           ++   FSP+   +   + D    ++++ MDT       +  N    + 
Sbjct: 524 NTCSTLVGHSGTVYSTSFSPDNMYLVSGSED--KTVKLWSMDTHTALVNYKGHNHP--VW 579

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES 320
             +FS  G     S   D+   +++ D       R+      ++   S+ P+    VF  
Sbjct: 580 DVKFSPLGHYFA-SASHDQTARLWACDHIY--PLRIFAGHTNDVDTVSFHPNGCY-VFTG 635

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +   +++    +  D  R+     A       SP G  +A     G    I +     
Sbjct: 636 SSDKTCRMW--DVSTGDSVRLFLGHTAPVLSTQVSPDGRWLATGSEDG---VICLWDIGT 690

Query: 381 SQE 383
            + 
Sbjct: 691 GKR 693


>gi|21224291|ref|NP_630070.1| hypothetical protein SCO5953 [Streptomyces coelicolor A3(2)]
 gi|2808781|emb|CAA16210.1| putative membrane protein [Streptomyces coelicolor A3(2)]
          Length = 913

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 75/230 (32%), Gaps = 33/230 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + +++A A         V L D    +        R    +   S +G    ++  
Sbjct: 349 AFSRDGKRLAAAYEAA-----VVLWDVASGKKINEFATDRRTTTSLALSPDGTTVAVA-- 401

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
               + I+     + +  R+   L +      +SPD  ++ F++  +G  +++V      
Sbjct: 402 -GGGLRIW----DAGSGRRIGEPLGVTGDRVVFSPDGRKLAFDALNDGGSEVHVRGVGAE 456

Query: 337 DQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
               +             ++P  D +A     G    + +   D           +  A 
Sbjct: 457 GAGEVVIPYPHDVISGIAFTPDTDALAVGTEDGG---LRLWDPDSGAAEGRAMSGHQGAI 513

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
                 R++ F+       GS++ +    G + T+    A    P  +GF
Sbjct: 514 ------RAIAFAA-----GGSRIATA---GADRTIRQWNAETGSP--IGF 547



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 73/227 (32%), Gaps = 35/227 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+   +   +        + L +   +     + +    +    F  +G++ ++   
Sbjct: 641 SYSPDGTSLLIVS-----PDALRLWEEGAEARTVTLDSSVGPVAGAAFMPHGRQIVVGSY 695

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI-----SASYSPDSSQIVFESDREGKEQLYVMQ 332
             + +     D  +      T    I+I       + S D  Q+ +  D  G     V  
Sbjct: 696 AGKLLFEDLDDEATG-----TPGASIDITCAARHLAVSQDGMQVAYACDDTGG----VAD 746

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL---VED 389
           +     +  + + E      V SP G  +      G  + +     +   E L+   V  
Sbjct: 747 AEAGGVR--TFEAEDRVSALVISPDGRTLILGTLDGTLWRL-----EHGAEALVGVGVHR 799

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             +++  + P GR    S  +DG        +  +G  E     PA+
Sbjct: 800 GAVRSVAYGPDGRWFA-SAGEDGS-----VVVHPHGAREISARIPAH 840



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 65/212 (30%), Gaps = 23/212 (10%)

Query: 200 GANIRYLT-PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           GA  R +T  S    +    F P+ +++   +Y  + +     +D      P    +   
Sbjct: 663 GAEARTVTLDSSVGPVAGAAFMPHGRQIVVGSYAGKLLFE--DLDDEATGTPGASIDITC 720

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIV 317
                  S +G +   +            D ++      T      +SA   SPD   ++
Sbjct: 721 AARHLAVSQDGMQVAYACDDTGG----VADAEAGGVR--TFEAEDRVSALVISPDGRTLI 774

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                 G     + +     +  +       +     + P G   A     G      V+
Sbjct: 775 L-----GTLDGTLWRLEHGAEALVGVGVHRGAVRSVAYGPDGRWFASAGEDGSV----VV 825

Query: 377 KKDGSQE---RLLVEDSNLQAPTWSPSGRSLI 405
              G++E   R+      ++A  +S  G  LI
Sbjct: 826 HPHGAREISARIPAHTGPVEAVAFSGDGSRLI 857



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 49/306 (16%), Positives = 98/306 (32%), Gaps = 34/306 (11%)

Query: 124 LRVEFRLWDVKDRKQI------------IGKKFFSSPASWRKIAHTISDD-IYQSITGEK 170
                 LWDV   K+I            +      +  +       I D    + I    
Sbjct: 361 YEAAVVLWDVASGKKINEFATDRRTTTSLALSPDGTTVAVAGGGLRIWDAGSGRRIGEPL 420

Query: 171 GDFNSRILFVSESVV-------SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           G    R++F  +           G  +  +  +  +GA    +    D ++    F+P+ 
Sbjct: 421 GVTGDRVVFSPDGRKLAFDALNDGGSEVHVRGVGAEGAGEVVIPYPHD-VISGIAFTPDT 479

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             +A      ED               + +   +  I A  F++ G R   +   D  + 
Sbjct: 480 DALA---VGTEDGGLRLWDPDSGAAEGRAMSGHQGAIRAIAFAAGGSRIA-TAGADRTIR 535

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            ++ +  S     LT         ++S   S++V      G++        G+   R   
Sbjct: 536 QWNAETGSPIGFPLTGHAGPVDFIAFSRGGSELV----SLGEDATLRRWDAGNALLRTGP 591

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGR 402
           D  ++      +P+G  +A     G +  + V  ++   Q   L     + + ++SP G 
Sbjct: 592 DDASAPDALAVAPRGAKVAV----GGREGVRVFNQETGVQVAALDLPQGVLSLSYSPDGT 647

Query: 403 SLIFSR 408
           SL+   
Sbjct: 648 SLLIVS 653


>gi|323345208|ref|ZP_08085431.1| 6-phosphogluconolactonase [Prevotella oralis ATCC 33269]
 gi|323093322|gb|EFZ35900.1| 6-phosphogluconolactonase [Prevotella oralis ATCC 33269]
          Length = 367

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 70/192 (36%), Gaps = 17/192 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALI 274
           RF+PN + +    +  + +L++ +   +      +I         PR   +SS+G+   I
Sbjct: 172 RFAPNGKHIYATDFSADRLLQIEIKKDKSTLGKAKILVKVPRDSGPRHIEYSSDGRFLYI 231

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YSPDSSQIVFESDREGKEQL 328
             +    + ++  DLQ+   + L       ++A        SPD  + ++ S+R   + +
Sbjct: 232 MSELSGNVTVF--DLQNKNKKMLQEIQSDEVNARGGADIHISPDG-RFLYSSNRLKNDGI 288

Query: 329 YVMQSNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + N ++   +++           +   +P G  +           +  + +      
Sbjct: 289 AIFKVN-TETGMLTKVGYQLTGMHPRNFNITPNGKFLLCACRDSNIIQVFEINRSTGLLT 347

Query: 385 LLVEDSNLQAPT 396
               D ++  P 
Sbjct: 348 DTHHDIHVDKPV 359


>gi|168705559|ref|ZP_02737836.1| WD-40 repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 483

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 76/221 (34%), Gaps = 20/221 (9%)

Query: 195 VMDRDGANIRYLTPSRDQ--ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           V+  D A  + +T   D+  ++     SP+ + VA           V + D        +
Sbjct: 246 VVIWDVATGKRVTEIGDEADVVLAADVSPDHKFVAL----GGPGKLVKVYDVATGTLKHK 301

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I      + A  FS +G+    S  ++    ++           L +        S+  D
Sbjct: 302 IKKHTDWVTAIEFSPDGELLA-SGDRNGGAFVWEA-ATGGIVFTLGDHKDAVTGLSWRAD 359

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS----- 367
           S  +   S+ +GK  L+    +G   + I+   +A       +P    + + +       
Sbjct: 360 SQMLASASE-DGKVILW-FAEDGFPTRTITAQADAKAPARNKTPGVLAVGYARTGQFVTC 417

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLI 405
           G      V K DG+Q   L  +     P+   +S  G  ++
Sbjct: 418 GRDNTARVWKADGTQVARL--EGFTDVPSKAVFSHDGERVL 456



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 59/182 (32%), Gaps = 14/182 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSV-DLQSNA-TERLTNTLFINISASYSPDSSQIVFESD 321
           RFS NGK  L    +  A     + D+ +      + +   + ++A  SPD     F + 
Sbjct: 225 RFSRNGKWLLAGGGRGAAQGRVVIWDVATGKRVTEIGDEADVVLAADVSPDHK---FVAL 281

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               + + V        K   +          +SP G+L+A    +G  F   V +    
Sbjct: 282 GGPGKLVKVYDVATGTLKHKIKKHTDWVTAIEFSPDGELLASGDRNGGAF---VWEAATG 338

Query: 382 QERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                + D        +W    + L  S  +DG     +     +G     I   A A  
Sbjct: 339 GIVFTLGDHKDAVTGLSWRADSQMLA-SASEDGK---VILWFAEDGFPTRTITAQADAKA 394

Query: 440 PQ 441
           P 
Sbjct: 395 PA 396


>gi|115377438|ref|ZP_01464641.1| dipeptidyl peptidase IV [Stigmatella aurantiaca DW4/3-1]
 gi|310823941|ref|YP_003956299.1| peptidase, s9b (dipeptidyl peptidase iv) subfamily [Stigmatella
           aurantiaca DW4/3-1]
 gi|115365536|gb|EAU64568.1| dipeptidyl peptidase IV [Stigmatella aurantiaca DW4/3-1]
 gi|309397013|gb|ADO74472.1| Peptidase, S9B (Dipeptidyl peptidase IV) subfamily [Stigmatella
           aurantiaca DW4/3-1]
          Length = 737

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 47/238 (19%), Positives = 90/238 (37%), Gaps = 47/238 (19%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--------- 264
           + +PRFSP+ ++VAY    D D+ RV L   +  R  +     ++  LA           
Sbjct: 157 IIDPRFSPDGKQVAYV--RDNDVFRVALATNKEQRVTQGGSPEKTHGLAEFVAQEEMSRF 214

Query: 265 ----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S + K    +               ++A E+LT    +++     P+    VF  
Sbjct: 215 SGYWWSPDAKFIAYAES------------DTSAVEKLTI---VDVMH---PERGGNVFAY 256

Query: 321 DREGKE----QLYVMQSNGSDQKRISQDKEASYF--DPVWSPQG--DLIAFTKFSGEKFA 372
            R GK     +L +    G     ++ D +A  +    VW   G   ++   +   E+  
Sbjct: 257 PRPGKNNAVVRLGITPVTGGKTVWVAWDAKAYPYLATVVWQKGGPLTVLVQNRTQTEQQL 316

Query: 373 IGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           + V  + G  + LL E      + +   P W   G   ++  +++G    +L + D +
Sbjct: 317 LSVDARTGKTQVLLTEKDSAWLNLDQDFPRWLEDGSGFLWFTERNGGPEVELRNADGS 374



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 40/108 (37%), Gaps = 13/108 (12%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           L V ++   ++ R+S     SY     S  G+ I      G    + V+++   +   L 
Sbjct: 100 LSVEEAARRERMRVSARGFTSY---DLSEDGERILV----GLSGKLYVVERTTGKVVELK 152

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
               +  P +SP G+ + + R  D      ++ + L    E  +    
Sbjct: 153 TGVGIIDPRFSPDGKQVAYVRDND------VFRVALATNKEQRVTQGG 194



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 46/328 (14%), Positives = 114/328 (34%), Gaps = 35/328 (10%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDI-YQSITGEKGDFNSRIL-FVSESVVSGII 189
           DV        K+   +     +  H +++ +  + ++   G + S    F++ +      
Sbjct: 176 DVFRVALATNKEQRVTQGGSPEKTHGLAEFVAQEEMSRFSGYWWSPDAKFIAYAESDTSA 235

Query: 190 KNSLCVMDR----DGANIR-YLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMD 243
              L ++D      G N+  Y  P ++  +     +P    K  +  +D +    +  + 
Sbjct: 236 VEKLTIVDVMHPERGGNVFAYPRPGKNNAVVRLGITPVTGGKTVWVAWDAKAYPYLATVV 295

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSN---GKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +       +   R+       S +   GK  ++  +KD A     ++L           
Sbjct: 296 WQKGGPLTVLVQNRTQTEQQLLSVDARTGKTQVLLTEKDSAW----LNLD---------- 341

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   +  D S  ++ ++R G  ++ +  ++GS  +   + +        +  +   
Sbjct: 342 ---QDFPRWLEDGSGFLWFTERNGGPEVELRNADGSLARSWVKPEAGFRTLVRFLEKDRT 398

Query: 361 IAFTKF-SGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           + F    +  +  +  +K  G+ E+L       +N  A T S  G  L+   + D     
Sbjct: 399 LYFNGDANPTESYVWRVKDGGAPEKLSTGATGPANEMAVTVSKQGGLLVALSQSD-TAMP 457

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVG 444
           + + +  +G    +   P+ A +P +  
Sbjct: 458 RYHVLRTDGS--RVGELPSVAVEPSFTP 483


>gi|224143295|ref|XP_002324907.1| predicted protein [Populus trichocarpa]
 gi|222866341|gb|EEF03472.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 72/254 (28%), Gaps = 27/254 (10%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
              +    +        G     L       +    FSP    +  ++ D      V L 
Sbjct: 396 QGENDTAPSEQGQSPNSGKRSYTLFQGHSGPVHSATFSPLGDFILSSSADT----TVRLW 451

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T+++            +   +FS  G+    S   D    I+S+D       R+     
Sbjct: 452 STKLNANLVCYKGHNYPVWDVQFSPVGQYFA-SASHDRTARIWSMDRI--QPLRIMAGHL 508

Query: 303 INISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            ++    +  + + I   S     + + +      +  RI     +       SP G  +
Sbjct: 509 SDVDCLQWHANCNYIATGSS---DKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYM 565

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS------RKKDGDTG 415
           A     G      +M  D S  R +       +  WS     L FS           D  
Sbjct: 566 ASADEDGT-----IMMWDLSSGRCISPLIGHNSCVWS-----LAFSCEGSLLASGSADCT 615

Query: 416 SKLYSIDLNGRNET 429
            KL+ +  + +   
Sbjct: 616 VKLWDVTTSTKAPR 629


>gi|213967010|ref|ZP_03395160.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
 gi|301385195|ref|ZP_07233613.1| hypothetical protein PsyrptM_21272 [Pseudomonas syringae pv. tomato
           Max13]
 gi|302062763|ref|ZP_07254304.1| hypothetical protein PsyrptK_22492 [Pseudomonas syringae pv. tomato
           K40]
 gi|302130136|ref|ZP_07256126.1| hypothetical protein PsyrptN_02010 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gi|213928332|gb|EEB61877.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
          Length = 377

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 66/179 (36%), Gaps = 23/179 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FSS+G+   +  +    +  + ++ ++ A ++++    I      +P  ++    +D +
Sbjct: 206 AFSSDGRFLYVVGEMSGTVTAFLINEKTGALKQVSQADGIPARLKLAPGQARDARNNDLK 265

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                 +  ++                    +P G  +  ++ +    ++  +       
Sbjct: 266 DDPTPRIWAAD-----------------IRLAPDGKWLFISERTTSSVSVFKVDPAKGNV 308

Query: 384 RLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             +    VE+   +    SP+GR L+ S +K    GS  Y+I  +G  + +   P+   
Sbjct: 309 TFVENYPVEEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIGASGALKRVSEAPSGKG 365


>gi|167536841|ref|XP_001750091.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771420|gb|EDQ85087.1| predicted protein [Monosiga brevicollis MX1]
          Length = 413

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  K+A A+ D      + + +    +    +      +    +SS+ +    S  
Sbjct: 22  SVSPDGLKLASASADK----TIKVWNAYDGQLLSTLSGHELGVNDVAWSSDSRFLA-SAS 76

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + I+  +  +    + L + +      +++P  + +V  S     E + +      
Sbjct: 77  DDTTIRIW--NAATGQCVQTLKDHINYVFCVNFNPQGNLLVSGSF---DESVRIWDVKTG 131

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAP 395
             +R             +S  G LIA   + G      +      Q  + LV+  N  +P
Sbjct: 132 VCRRQLSAHSDPISAVCFSRDGSLIASGSYDG---LCRLWDTATGQCLKTLVD--NDNSP 186

Query: 396 T----WSPSGRSLIFSR 408
                +SP+G+ ++ S 
Sbjct: 187 VSAVCFSPNGKFVLAST 203



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 52/146 (35%), Gaps = 10/146 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + +                +F   F+P    +   ++D+     V + D +
Sbjct: 74  SASDDTTIRIWNAATGQCVQTLKDHINYVFCVNFNPQGNLLVSGSFDE----SVRIWDVK 129

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
                +++      I A  FS +G     S   D    ++  D  +    + L +     
Sbjct: 130 TGVCRRQLSAHSDPISAVCFSRDGSLIA-SGSYDGLCRLW--DTATGQCLKTLVDNDNSP 186

Query: 305 ISAS-YSPDSSQIVFESDREGKEQLY 329
           +SA  +SP+  + V  S  + K +L+
Sbjct: 187 VSAVCFSPNG-KFVLASTLDSKIRLW 211



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 35/93 (37%), Gaps = 5/93 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    S+ + D      R    +    +    FS +   +A  +YD        L DT
Sbjct: 115 VSGSFDESVRIWDVKTGVCRRQLSAHSDPISAVCFSRDGSLIASGSYDG----LCRLWDT 170

Query: 245 RIDRAPK-RIGNFRSMILAPRFSSNGKRALISV 276
              +  K  + N  S + A  FS NGK  L S 
Sbjct: 171 ATGQCLKTLVDNDNSPVSAVCFSPNGKFVLAST 203


>gi|148222755|ref|NP_001089581.1| hypothetical protein LOC734637 [Xenopus laevis]
 gi|71051798|gb|AAH99005.1| MGC115367 protein [Xenopus laevis]
          Length = 895

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 79/228 (34%), Gaps = 16/228 (7%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             SG+ +  +     +   ++      +       +SP+ Q +        D  +V + D
Sbjct: 340 GCSGLGQLLVWEWQSESYVLKQQGHFNNMGSL--SYSPDGQHIV----TGGDDGKVKVWD 393

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T          +  S + A  F+S+G + ++S   D  +  +S+ L+       T+    
Sbjct: 394 TSSGFCYVTFTDHTSSVTAVTFTSSG-QVILSASLDGTVRAFSL-LRYRNFRTFTSPK-- 449

Query: 304 NISASYSP---DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              A +S    D S  +  +  +   ++YV          +    E       ++P   +
Sbjct: 450 --PAQFSCLGVDGSGEIVCAGAQDSYEVYVWSMQTGRLLDVLAGHEGPISSVAFNPWRSV 507

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           +A   +        ++    + E  L   S+  A T+ P GR +  + 
Sbjct: 508 LATASWDKTVRLWDMVDSWRTTET-LNLSSDALAVTFRPDGREIAVAS 554


>gi|332230002|ref|XP_003264175.1| PREDICTED: WD repeat-containing protein 38-like isoform 1 [Nomascus
           leucogenys]
          Length = 314

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 68/201 (33%), Gaps = 17/201 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    FSP+ Q +   + D      VY  +TR  +   R+G     +   RF
Sbjct: 16  FFGQHGGEVNSSAFSPDGQMLLTGSEDG----CVYGWETRSGQLLWRLGGHTGPVKFCRF 71

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G     S   D  + +++V  ++     L        + S+SPDS Q+         
Sbjct: 72  SPDG-HLFASASCDYTVRLWNV-ARAKCLRVLKGHQRSVETVSFSPDSRQLA---SGGWD 126

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +++ + +       R+      S     +SP  + +A   +      + +         +
Sbjct: 127 KRVMLWEVQSGQMLRLLVGHRDSVQSSDFSPTVNCLATGSWDST---VRIWDLRTGTPAV 183

Query: 386 LV-----EDSNLQAPTWSPSG 401
                     N+    +SPSG
Sbjct: 184 FHQALEGHSGNISCLCYSPSG 204



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 8/160 (5%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +  T   R  K  G     + +  FS +G+  L +  +D  +  +          RL   
Sbjct: 5   VPATLAVRRVKFFGQHGGEVNSSAFSPDGQMLL-TGSEDGCVYGWET-RSGQLLWRLGGH 62

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   +SPD       S       + +     +   R+ +  + S     +SP    
Sbjct: 63  TGPVKFCRFSPDGHLFASASC---DYTVRLWNVARAKCLRVLKGHQRSVETVSFSPDSRQ 119

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSP 399
           +A   +        V    G   RLLV   + +Q+  +SP
Sbjct: 120 LASGGWDKRVMLWEVQS--GQMLRLLVGHRDSVQSSDFSP 157



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/226 (12%), Positives = 73/226 (32%), Gaps = 20/226 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + +   A    +     + +    FSP+ +++A   +D     RV L + +
Sbjct: 80  SASCDYTVRLWNVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDK----RVMLWEVQ 135

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT----ERLTNTL 301
             +  + +   R  + +  FS        +   D  + I+  DL++       + L    
Sbjct: 136 SGQMLRLLVGHRDSVQSSDFSPTVNCLA-TGSWDSTVRIW--DLRTGTPAVFHQALEGHS 192

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  YSP        +     + +++ +   S      +          +S     +
Sbjct: 193 GNISCLCYSPSG----LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSADELWL 248

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
           A    +G    + V   +  +    ++          ++P G+ L+
Sbjct: 249 A---SAGYSRMVKVWDCNTGKCLETLKGVLDVAHTCAFTPDGKILV 291


>gi|253563537|ref|ZP_04840994.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251947313|gb|EES87595.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 952

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 76/236 (32%), Gaps = 11/236 (4%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I   ++   G      L       +    + +   D D  NI+ LTP   Q    P    
Sbjct: 344 INSRLSYRNGRVYWSELVPGLR-WTHQNYSIIKYYDLDKKNIKTLTPR--QRYLSPAIDE 400

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
             Q +A +    E   ++ L+               +  +     + G   +     D  
Sbjct: 401 QGQHIAVSRPTVEGKNQLVLIQAEKGNELAAFDVPDNAFIKELTFAGGDTIISIAVADSG 460

Query: 282 MDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + +   +  +   + L  T   N  S  +  D     FES   G   +Y +       +R
Sbjct: 461 IRLLQFNFGNGIWKELLKTASANITSPVW-KDGKIF-FESGANGTNNIYSLNPADGQVRR 518

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           ++  +  ++     S  G L  F+ +  + + I  +  D     +L E ++L  P 
Sbjct: 519 MTAARFGAFDPSFGSSDGRLF-FSDYQADGYRIASLPTDS----MLFEKADLNRPA 569



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 11/123 (8%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERL 385
           +L          K + +   A+   PVW   G  I F   +     I  +   DG   R+
Sbjct: 462 RLLQFNFGNGIWKELLKTASANITSPVW-KDGK-IFFESGANGTNNIYSLNPADGQVRRM 519

Query: 386 LVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                    P++ S  GR  +F      D G ++ S+  +    +++   A  + P  + 
Sbjct: 520 TAARFGAFDPSFGSSDGR--LFFSDYQAD-GYRIASLPTD----SMLFEKADLNRPASMP 572

Query: 445 FMD 447
           F++
Sbjct: 573 FVE 575


>gi|224038925|gb|ACN38354.1| putative WD-repeat-containing protein [Micromonospora inyonensis]
          Length = 310

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 84/261 (32%), Gaps = 17/261 (6%)

Query: 184 VVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           V +     ++ + D   G  +          ++   F P  + +A A+ D     R++ +
Sbjct: 33  VATSGEDGTIRLWDATTGEQVGETLTGHTDTIWLVAFHPEGRLLASASED--RTARIWDV 90

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T        +G+    +    F  +G     +   D  + ++ V       E LT +  
Sbjct: 91  TTGRQVGEPLVGHTAG-VYGVAFHPDGTLLA-TGSADHTVRLWKVPGGEPVGEPLTASTD 148

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                ++ PD   +    D          Q  G+     ++          +SP G L+A
Sbjct: 149 EIDGVAFHPDGHLVASTGDAVRLYDTATGQPVGNPLVGHTKG----AVSVAFSPDGRLLA 204

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +        I      G     LV     +   T+ P GR L+       D   +++ +
Sbjct: 205 -SGSDDLTVRIWDHAAGGPAVGPLVGHTDAVDGVTFHPGGRLLV---SAGEDCTVRVWDV 260

Query: 422 DLNGRNETLINTPAYASDPQW 442
             +G+    + T   A  P W
Sbjct: 261 -ASGKQVGELETGHTA--PVW 278



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 78/243 (32%), Gaps = 33/243 (13%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           R+WDV   +Q+              + HT    +Y       G              +G 
Sbjct: 86  RIWDVTTGRQVGE----------PLVGHTA--GVYGVAFHPDGTLL----------ATGS 123

Query: 189 IKNSLCVMDRDGANI--RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
             +++ +    G       LT S D+I     F P+   VA       D +R+Y   T  
Sbjct: 124 ADHTVRLWKVPGGEPVGEPLTASTDEIDGV-AFHPDGHLVA----STGDAVRLYDTATGQ 178

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                 +G+ +  + +  FS +G+    S   D  + I+       A   L         
Sbjct: 179 PVGNPLVGHTKGAV-SVAFSPDGRLLA-SGSDDLTVRIWDHAAGGPAVGPLVGHTDAVDG 236

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++ P    +V  +  +   +++ + ++G     +     A  ++  +   G  I     
Sbjct: 237 VTFHPGGRLLV-SAGEDCTVRVWDV-ASGKQVGELETGHTAPVWNMGFDRTGSRIVTASQ 294

Query: 367 SGE 369
            G 
Sbjct: 295 DGT 297



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 50/161 (31%), Gaps = 7/161 (4%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFIN 304
            +    +   R  ++   F  +    + +  +D  + ++  D  +     E LT      
Sbjct: 8   TQPSLVLTGHREGVIGAVFHPD-DHLVATSGEDGTIRLW--DATTGEQVGETLTGHTDTI 64

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              ++ P+   +   S+ +   +++ + + G           A  +   + P G L+A  
Sbjct: 65  WLVAFHPEGRLLASASE-DRTARIWDV-TTGRQVGEPLVGHTAGVYGVAFHPDGTLLATG 122

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                     V   +   E L      +    + P G  + 
Sbjct: 123 SADHTVRLWKVPGGEPVGEPLTASTDEIDGVAFHPDGHLVA 163


>gi|290955251|ref|YP_003486433.1| peptidase [Streptomyces scabiei 87.22]
 gi|260644777|emb|CBG67862.1| putative peptidase [Streptomyces scabiei 87.22]
          Length = 784

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 58/176 (32%), Gaps = 24/176 (13%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P    +G        +     ++S  +  +    L +        ++SPD   I + +  
Sbjct: 94  PSVDPSGTHVAFICDRGGVPQLWSGPVGGHEVHLLDSDPHPVKEVAWSPDGRWIAYTTAP 153

Query: 323 EGKEQLYV--MQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            G E   V  ++ +G+ +  ++  +   S +   W   G  +A T           +   
Sbjct: 154 GGGEHTRVLCVRPDGTGRHILAGAEPGSSAYLGCWQHDGSAVAVTVAEP-------VPAP 206

Query: 380 GSQER----LLVEDSNLQ--------APTWSP-SGRSLIFSRKKDGDTGSKLYSID 422
           G  E      L E              P W+   GR+++      GD G   +++D
Sbjct: 207 GEGEAEEWPALTEPGLADPRTYTARRPPGWAARDGRAVLLGGPHHGDAGPA-HTVD 261



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 1/96 (1%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRS 403
           +    + P   P G  +AF    G    +      G +  LL  D + ++   WSP GR 
Sbjct: 87  RSHGCWYPSVDPSGTHVAFICDRGGVPQLWSGPVGGHEVHLLDSDPHPVKEVAWSPDGRW 146

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           + ++    G   +++  +  +G    ++      S 
Sbjct: 147 IAYTTAPGGGEHTRVLCVRPDGTGRHILAGAEPGSS 182



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 12/114 (10%), Positives = 29/114 (25%), Gaps = 6/114 (5%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R    + P   P+   VA+    D   +               + +    +    +S +G
Sbjct: 87  RSHGCWYPSVDPSGTHVAF--ICDRGGVPQLWSGPVGGHEVHLLDSDPHPVKEVAWSPDG 144

Query: 270 KRALISVQKDEAMDIYSVDLQ-SNATERLTNTLFINISA---SYSPDSSQIVFE 319
           +    +           + ++       +        SA    +  D S +   
Sbjct: 145 RWIAYTTAPGGGEHTRVLCVRPDGTGRHILAGAEPGSSAYLGCWQHDGSAVAVT 198



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 9/68 (13%)

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-------AYA 437
             +       P+  PSG  + F   + G    +L+S  + G    L+++        A++
Sbjct: 84  QPLRSHGCWYPSVDPSGTHVAFICDRGG--VPQLWSGPVGGHEVHLLDSDPHPVKEVAWS 141

Query: 438 SDPQWVGF 445
            D +W+ +
Sbjct: 142 PDGRWIAY 149


>gi|240277050|gb|EER40560.1| transcriptional repressor TUP1 [Ajellomyces capsulatus H143]
          Length = 587

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 58/415 (13%), Positives = 129/415 (31%), Gaps = 81/415 (19%)

Query: 45  YSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW- 103
             P   A  +       G ++S  V   L        +  D        P       DW 
Sbjct: 209 AYPDPRASPQIHRPTPPGQQLSYRVGNTLAD------LDPDKLP-----PSQKREGSDWY 257

Query: 104 --------NSLGAQVL-------VTGRVIKEGKDRLRV-----EFRLWDVKDRKQIIGKK 143
                     L   ++       V   V      +          +++DV   + +   +
Sbjct: 258 AVFNPEVPRVLDVDLVHHLVHDSVVCCVRFSNDGKYVATGCNRSAQIFDVATGQLVTALQ 317

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV---SGIIKNSLCVMDRDG 200
                           DD   S+  ++GD   R +  S       +G     + V D   
Sbjct: 318 ----------------DD---SVLDKEGDLYIRSVCFSPDGRYLATGAEDKQIRVWDIAT 358

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             I+++    +Q ++   F+ N + +A  + D      V L D  +D   + I +    +
Sbjct: 359 RTIKHIFSGHEQDIYSLDFARNGRYIASGSGDK----TVRLWDI-VDGKQELILSIEDGV 413

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTN---TLFINISASYSPDSSQI 316
                S +G+    +   D+++ ++  D  +    ERL N    +    S +++P+   +
Sbjct: 414 TTVAISPDGRFVA-AGSLDKSVRVW--DTTTGYLVERLENPDGHMDSVYSVAFAPNGRDL 470

Query: 317 VFESDREGKEQLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           V  S  +   +++ +             G    R  +  +        +P G  +     
Sbjct: 471 VSGSL-DKTIKMWELTPPRGMVPGAGPKGGKCVRTFEGHKDFVLSVCLTPDGRWVMSGSK 529

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 +          +++++       + +PS    +F+    GD  ++++S 
Sbjct: 530 DRG---VQFWDPATGNAQMMLQGHKNSVISVAPSPTGNLFATG-SGDMRARIWSY 580


>gi|242007076|ref|XP_002424368.1| Aladin, putative [Pediculus humanus corporis]
 gi|212507768|gb|EEB11630.1| Aladin, putative [Pediculus humanus corporis]
          Length = 517

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/292 (15%), Positives = 100/292 (34%), Gaps = 45/292 (15%)

Query: 158 ISDDIYQSI------TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
            +D + ++             F ++ L    + +S +       M   G  +        
Sbjct: 89  FADAVEEAANLKCNEAPIGVIFLAKQLLKVVNGISKLRNFIYPHMRGKGERLISAVSQTR 148

Query: 212 QILFEP----RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                P     + P+  K+A AT+D  D +R+Y  DT++   P      +S +    +  
Sbjct: 149 DWSLSPIRAMEWHPHTTKLAVATWD--DSVRIYSSDTQL--IPILKCKNQSSVSCLAWRP 204

Query: 268 NGKRALISVQK-----DEAMDIYSVDLQ----------SNATERLTNTLFINISASYSPD 312
                  S  +     +E + ++ +D                ++  ++   ++   +SP 
Sbjct: 205 ------FSASELAVGCEEGVIVWVIDPNSVVTRPSMSCGQVLKQPGHSPVTSVE--WSPK 256

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              ++  S  +    +Y+   +      + +          WSP    + FT      F 
Sbjct: 257 GDLLLTASVVD--TSMYLWDVSMEKYVALKRFGGGGVSFVTWSPDSSKV-FTATGRLTFR 313

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +   +K  S ER  V    +Q   WSP G  ++F+  ++      +Y++  +
Sbjct: 314 VWKTEKWIS-ERWTVISGRVQTACWSPCGSVILFATTEE----PVIYALPFD 360



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 72/214 (33%), Gaps = 18/214 (8%)

Query: 242 MDTRIDRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           M  + +R    +   R   L+P     +  +  +  ++   D+++ IYS D Q     + 
Sbjct: 133 MRGKGERLISAVSQTRDWSLSPIRAMEWHPHTTKLAVATW-DDSVRIYSSDTQLIPILKC 191

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-------SDQKRISQDKEASYF 350
            N   ++  A + P S+  +     EG   ++V+  N        S  + + Q   +   
Sbjct: 192 KNQSSVSCLA-WRPFSASELAVGCEEGV-IVWVIDPNSVVTRPSMSCGQVLKQPGHSPVT 249

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              WSP+GDL+           +  +  +            +   TWSP    + F+   
Sbjct: 250 SVEWSPKGDLLLTASVVDTSMYLWDVSMEKYVALKRFGGGGVSFVTWSPDSSKV-FTAT- 307

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            G    +++  +    +E             W  
Sbjct: 308 -GRLTFRVWKTEKW-ISERWTVISGRVQTACWSP 339


>gi|167764879|ref|ZP_02437000.1| hypothetical protein BACSTE_03271 [Bacteroides stercoris ATCC
           43183]
 gi|167697548|gb|EDS14127.1| hypothetical protein BACSTE_03271 [Bacteroides stercoris ATCC
           43183]
          Length = 738

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 42/269 (15%), Positives = 87/269 (32%), Gaps = 56/269 (20%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            NI  + P         + + ++ ++   ++     + V          P +  +  S  
Sbjct: 38  QNISGVIPIPGDGEHYSQMNADKTQIIKYSFKTGKSVEVLFDAATARECPFKKFDSYS-- 95

Query: 261 LAPRFSSNGKRALISV--------QKDEAMDIYSV--DLQSN---ATERLTNTLFINISA 307
               F+ +G + LI+                IYS+  +L        E+L++        
Sbjct: 96  ----FAPDGSKLLIATETVPVYRHSYTAVHYIYSLKRNLDGKINNVVEKLSDG-GPQQVP 150

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---YFDPVW---------- 354
            +SPD +Q+ F  D        V    G+ + ++++D   +      P W          
Sbjct: 151 IFSPDGNQVAFVRD---NNIFLVKLLYGNSESQVTEDGSRNEVLNGIPDWVYEEEFAFNR 207

Query: 355 ----SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS---LIFS 407
               SP   ++AF +F   +                      + P  +P  +      + 
Sbjct: 208 ALEFSPDSKMLAFIRFDEREVPSYTFPV-----------FAGEVPHIAPYEKYPGEYTYK 256

Query: 408 RKKDGDTGSK--LYSIDLNGRNETLINTP 434
             K G+  SK  +++ D+  +    IN P
Sbjct: 257 YPKTGEKNSKVSVHTFDIKSKVTRKINLP 285



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 58/475 (12%), Positives = 146/475 (30%), Gaps = 120/475 (25%)

Query: 51  AFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQV 110
           A   F   +     + E+V      S  F   +         + +       ++ + A  
Sbjct: 14  ALAGFA-QNSKPLDLKEIV------SGEFIPQNISGVIPIPGDGEH------YSQMNADK 60

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSIT 167
               +   +    + V   L+D    ++   K    +  +P   + +  T +  +Y+   
Sbjct: 61  TQIIKYSFKTGKSVEV---LFDAATARECPFKKFDSYSFAPDGSKLLIATETVPVYRHSY 117

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                     ++  +  + G I N +  +  DG   +            P FSP+  +VA
Sbjct: 118 T-----AVHYIYSLKRNLDGKINNVVEKL-SDGGPQQV-----------PIFSPDGNQVA 160

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRS----MILAPRF--------------SSNG 269
           +   ++     ++L+      +  ++    S    +   P +              S + 
Sbjct: 161 FVRDNN-----IFLVKLLYGNSESQVTEDGSRNEVLNGIPDWVYEEEFAFNRALEFSPDS 215

Query: 270 KRALI---------------------------------------SVQKDEAMDIYSVDLQ 290
           K                                           + +K+  + +++ D++
Sbjct: 216 KMLAFIRFDEREVPSYTFPVFAGEVPHIAPYEKYPGEYTYKYPKTGEKNSKVSVHTFDIK 275

Query: 291 SNATERL---TNTLFINISASYSPDSSQIV-FESDR-EGKEQLYVMQSNGSDQKRISQDK 345
           S  T ++              ++ D +++     +R + +  LY      +  K   +D+
Sbjct: 276 SKVTRKINLPLEEGGYIPRIRFTQDPNKLAIMTLNRHQNRFDLYFADPRSTVCKLAVRDE 335

Query: 346 EASYF------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--W 397
             +Y       + ++ P  +  +F         +     +G+  + +   S        +
Sbjct: 336 SGTYIRENVFDNIIFYP--ETFSFVSERNGYNHLYWYNINGNLIKQVTSGSYEVQDFLGY 393

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL-----INTPAYASDPQWVGFMD 447
            P   S  +S  ++    S +Y ID  G+   L      N+  +++D +   FM+
Sbjct: 394 DPENGSFYYSSNEESPLRSAIYKIDRKGKKTKLSSHTGTNSALFSTDMK--YFMN 446



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 46/120 (38%), Gaps = 4/120 (3%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGV 375
           F S+R G   LY    NG+  K+++           + P+     ++    S  + AI  
Sbjct: 357 FVSERNGYNHLYWYNINGNLIKQVTSGSYEVQDFLGYDPENGSFYYSSNEESPLRSAIYK 416

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           + + G + +L        A  +S   +  + +R    D  + +   D NG+  T +   A
Sbjct: 417 IDRKGKKTKLSSHTGTNSA-LFSTDMKYFM-NRYSSLDIPTVITLNDNNGKTLTTLVDNA 474


>gi|116250229|ref|YP_766067.1| adenylate cyclase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115254877|emb|CAK05951.1| putative adenylate cyclase [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 623

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 57/149 (38%), Gaps = 17/149 (11%)

Query: 15  INLCLLLVLIGGFFPTSIHA-------FVKVATNSANYSPVSIAFTKFVSIDELGGK--- 64
           I    L+++     P  + A        + +     +  P SIA   F ++   G +   
Sbjct: 188 IAAIALVLIGTQISPLPLAAMVSGIPAALSLDQTRGDPRP-SIAVMPFATMSGSGNQPYF 246

Query: 65  ---VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
              ++E V+  L R+    +I++DS          + +      LG   +V G   +EG 
Sbjct: 247 ADGLTEDVTTALARNPELQVIARDSTYAVRGQETDVRKLAA--KLGVDYVVEGSARREG- 303

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
           D+LRV  +L DV     +  + F    A 
Sbjct: 304 DQLRVSAQLIDVGTGAHLWSRSFDKKVAD 332


>gi|268560266|ref|XP_002646170.1| C. briggsae CBR-TAF-5 protein [Caenorhabditis briggsae]
 gi|187040819|emb|CAP20503.1| CBR-TAF-5 protein [Caenorhabditis briggsae AF16]
          Length = 646

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 64/175 (36%), Gaps = 15/175 (8%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D ++  + D +   +  R+      + +  FS + +R L+S   D+ + ++S+D Q N  
Sbjct: 372 DNVQSQMYDLQASTSSARLTGHGGPVFSVNFSPD-RRLLLSSSGDKTVRLWSMDAQRNVV 430

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             +     +   A +    S+  + +     + + +  ++     R+  D         +
Sbjct: 431 --IFRLPSMVWQAQF---CSRGYYFATASADKTVSMWSTDRMTPLRMFPDAYGDVGCIDY 485

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI 405
            P  + IA      E   + V          L      +AP     +SP GR L+
Sbjct: 486 HPNCNYIA---GGSEDRYVRVWDVVSGVRVRLFSG--HKAPIIALKFSPCGRYLV 535


>gi|47570176|ref|ZP_00240831.1| peptidase, putative [Bacillus cereus G9241]
 gi|47553155|gb|EAL11551.1| peptidase, putative [Bacillus cereus G9241]
          Length = 652

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++ +        ++ + +     P+WSP   
Sbjct: 22  STNISDDGKNVAFVKRIANWKDNTYRNHVWIYEKGKGQSYPLT-NGDIDSTCPLWSPNSR 80

Query: 360 LIAFTKFSG-EKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G  K  I V   DG    ++  E+  +    W+P+G+   +  + 
Sbjct: 81  DIAYLSPVGNGKNQIFVKSLDGYGGVQITNEEEGISIFKWNPTGKGFYYITQS 133



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 63/202 (31%), Gaps = 45/202 (22%)

Query: 266 SSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GK      +            ++  +     +  LTN    +    +SP+S  I + 
Sbjct: 26  SDDGKNVAFVKRIANWKDNTYRNHVWIYEKGKGQSYPLTNGDIDSTCPLWSPNSRDIAYL 85

Query: 320 SDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--------- 369
           S    GK Q++V   +G    +I+ ++E       W+P G    +   S E         
Sbjct: 86  SPVGNGKNQIFVKSLDGYGGVQITNEEEGISIFK-WNPTGKGFYYITQSKECEEIKKRKE 144

Query: 370 ------------------KFAIGVMKKDGSQER------LLVEDSNL--QAPTWSPSGRS 403
                                I  + ++  +ER       L +  +        S  G+ 
Sbjct: 145 LYGEFQHVGKEHQNNCLCYIEIQKVIQNDKEEREINGVYQLTDGKDFYIHEFDISNDGKK 204

Query: 404 LIFSRKK--DGDTGSKLYSIDL 423
           ++       +      LY +D+
Sbjct: 205 VVCMATPSLNDHMNGDLYILDV 226



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 83/281 (29%), Gaps = 56/281 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     + N       P +S N +   
Sbjct: 24  NISDDGKNVAFVKRIANWKDNTYRNHVWIYEKGKGQSYPLTNGDIDSTCPLWSPNSRDIA 83

Query: 274 I-SVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDRE-------- 323
             S   +    I+   L      ++TN    I+I   ++P      + +  +        
Sbjct: 84  YLSPVGNGKNQIFVKSLDGYGGVQITNEEEGISIF-KWNPTGKGFYYITQSKECEEIKKR 142

Query: 324 ----------GKEQ---------LYVMQSNGSDQK------RISQDKEASYFDPVWSPQG 358
                     GKE          +  +  N  +++      +++  K+    +   S  G
Sbjct: 143 KELYGEFQHVGKEHQNNCLCYIEIQKVIQNDKEEREINGVYQLTDGKDFYIHEFDISNDG 202

Query: 359 DLIAF----TKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS------ 407
             +      +        + ++  +  + + + V+     +  +SP G  + +S      
Sbjct: 203 KKVVCMATPSLNDHMNGDLYILDVEVEELQKMNVDRLLGGSVCFSPEGNKICYSASIREK 262

Query: 408 ---RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
              R    ++  ++Y ++  G     +        P QW  
Sbjct: 263 DYYRNHIQESTLEIYDMN-TGEVLQPLTNFDSTVMPLQWTA 302



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 94/295 (31%), Gaps = 58/295 (19%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
               +N + + ++ G    Y   + D     P +SPN + +AY +       ++++    
Sbjct: 43  DNTYRNHVWIYEK-GKGQSYPLTNGDIDSTCPLWSPNSRDIAYLSPVGNGKNQIFVKSLD 101

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----------------------KDEAMD 283
                 +I N    I   +++  GK      Q                      + +   
Sbjct: 102 -GYGGVQITNEEEGISIFKWNPTGKGFYYITQSKECEEIKKRKELYGEFQHVGKEHQNNC 160

Query: 284 IYSVDLQS-----------NATERLTNTL-FINISASYSPDSSQIVFESDREGKEQ---- 327
           +  +++Q            N   +LT+   F       S D  ++V  +     +     
Sbjct: 161 LCYIEIQKVIQNDKEEREINGVYQLTDGKDFYIHEFDISNDGKKVVCMATPSLNDHMNGD 220

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-----------KFSGEKFAIGVM 376
           LY++     + ++++ D+        +SP+G+ I ++                   I  M
Sbjct: 221 LYILDVEVEELQKMNVDRLLG-GSVCFSPEGNKICYSASIREKDYYRNHIQESTLEIYDM 279

Query: 377 KKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
              G   + L    +   P  W+  G  + +       T   +  +  +G  ETL
Sbjct: 280 NT-GEVLQPLTNFDSTVMPLQWTAKGILIRW----QDKTNYLIGVLAEDGTVETL 329


>gi|317155778|ref|XP_001825367.2| NACHT and WD40 domain protein [Aspergillus oryzae RIB40]
          Length = 1564

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 69/184 (37%), Gaps = 12/184 (6%)

Query: 218  RFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             FSPN   VA +++DD      V L D       K      S ++   FS + K  +++ 
Sbjct: 967  TFSPNGAHVACSSWDDTIQDDTVQLWDIDTGALYKSFPQPTSPVVNLTFSPDNKLLVLAT 1026

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +D    I   DL S    R        ++A + S DS  I   S+      + + + + 
Sbjct: 1027 SED---TIDICDLASERVIRTLEGHSDRVNALAISSDSKLIASGSN---DNSVRIWKIDT 1080

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                + + +          SP  +L+A       + AI +      + +  V+   +++ 
Sbjct: 1081 GALLQ-TLEHSGPIRSVGLSPNNELMASV---PRERAIWIWDAATGELQQKVDFDIIESS 1136

Query: 396  TWSP 399
             +SP
Sbjct: 1137 IFSP 1140



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 73/212 (34%), Gaps = 13/212 (6%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + D    ++ +      +      FSP+ + VA+      D   V L D    +  + + 
Sbjct: 1238 LWDATTGSLLHTFEGYSRKSGTFSFSPDSKLVAF--RPQSDSTCVQLWDVETAQLYRTLE 1295

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            +    I    FS N ++   S+++   + I+  ++Q+        +    +  ++S   +
Sbjct: 1296 DHLDSIDRVMFSPNCQQLA-SIEEGGTITIW--NIQTGERMFSLESRGSWVCVAFSRSGA 1352

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            ++   S     + + V  +N    +   ++ +       + P   LI+     G    + 
Sbjct: 1353 KLATGS----YDTVRVWDANTGVLQLELKEHKTIVTAVAFLPDEKLISSGSNDG---KLC 1405

Query: 375  VMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLI 405
                   +  + L     +    +S  GR + 
Sbjct: 1406 FWDLSKGELSQTLHSSGAINQIVFSADGRLMA 1437



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 55/363 (15%), Positives = 122/363 (33%), Gaps = 50/363 (13%)

Query: 73   LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
            L+ S     +      + + +         W++       TG + +      +V+F + +
Sbjct: 1087 LEHSGPIRSVGLSPNNELMASVPRERAIWIWDA------ATGELQQ------KVDFDIIE 1134

Query: 133  --VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG--- 187
              +   ++I+    F+S          +SD I  ++  +    +     ++ S  S    
Sbjct: 1135 SSIFSPERILEATGFNSA--------RLSDRILSTLFHKFDGSSRETWKLAVSPDSALLV 1186

Query: 188  --IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  S+ + D   A  +         +   + SPN++ +   + D +    V L D  
Sbjct: 1187 SCSDDGSVRLCDARIAATKPTIQGHSNEVAAIQLSPNRKLLGSVSSDHK----VLLWDAT 1242

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-MDIYSVDLQSNATER-LTNTLFI 303
                      +        FS + K      Q D   + ++  D+++    R L + L  
Sbjct: 1243 TGSLLHTFEGYSRKSGTFSFSPDSKLVAFRPQSDSTCVQLW--DVETAQLYRTLEDHLDS 1300

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                 +SP+  Q+   S  EG   + +      + +  S +   S+    +S  G  +A 
Sbjct: 1301 IDRVMFSPNCQQLA--SIEEGGT-ITIWNIQTGE-RMFSLESRGSWVCVAFSRSGAKLA- 1355

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +G    + V   +    +L +++    + A  + P  + +       G    KL   
Sbjct: 1356 ---TGSYDTVRVWDANTGVLQLELKEHKTIVTAVAFLPDEKLI-----SSGSNDGKLCFW 1407

Query: 422  DLN 424
            DL+
Sbjct: 1408 DLS 1410



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/196 (11%), Positives = 61/196 (31%), Gaps = 13/196 (6%)

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            + L     +   + +      + A  FS + +    S    + + ++  D  +       
Sbjct: 901  IKLPSVEENWNAELLSLDIKDVNAVAFSPDSRLIA-SASMSKQVKLW--DSVTGLLLHTL 957

Query: 299  NTLFINISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            + +F     ++SP+ + +   S  D    + + +   +     +      +   +  +SP
Sbjct: 958  DQVFYTGGLTFSPNGAHVACSSWDDTIQDDTVQLWDIDTGALYKSFPQPTSPVVNLTFSP 1017

Query: 357  QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDT 414
               L+           I +      +    +E  +    A   S   + +        D 
Sbjct: 1018 DNKLLVLATSEDT---IDICDLASERVIRTLEGHSDRVNALAISSDSKLIA---SGSNDN 1071

Query: 415  GSKLYSIDLNGRNETL 430
              +++ ID     +TL
Sbjct: 1072 SVRIWKIDTGALLQTL 1087



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 84/243 (34%), Gaps = 30/243 (12%)

Query: 186  SGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            SG   NS+ +   D GA ++ L  S          SPN + +A           +++ D 
Sbjct: 1066 SGSNDNSVRIWKIDTGALLQTLEHSGPIRSVG--LSPNNELMASV----PRERAIWIWDA 1119

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                  +++     +I +  FS   +R L      EA    S  L       L +    +
Sbjct: 1120 ATGELQQKV--DFDIIESSIFSP--ERIL------EATGFNSARLSDRILSTLFHKFDGS 1169

Query: 305  ISASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               ++    SPDS+ +V  SD +G  +L    +  +  K   Q           SP   L
Sbjct: 1170 SRETWKLAVSPDSALLVSCSD-DGSVRLC--DARIAATKPTIQGHSNEVAAIQLSPNRKL 1226

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKL 418
            +           + +            E  + ++   ++SP  + + F R +   T  +L
Sbjct: 1227 LGSVSSD---HKVLLWDATTGSLLHTFEGYSRKSGTFSFSPDSKLVAF-RPQSDSTCVQL 1282

Query: 419  YSI 421
            + +
Sbjct: 1283 WDV 1285


>gi|238498626|ref|XP_002380548.1| NACHT and WD40 domain protein [Aspergillus flavus NRRL3357]
 gi|220693822|gb|EED50167.1| NACHT and WD40 domain protein [Aspergillus flavus NRRL3357]
          Length = 1326

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 69/184 (37%), Gaps = 12/184 (6%)

Query: 218 RFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FSPN   VA +++DD      V L D       K      S ++   FS + K  +++ 
Sbjct: 729 TFSPNGAHVACSSWDDTIQDDTVQLWDIDTGALYKSFPQPTSPVVNLTFSPDNKLLVLAT 788

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +D    I   DL S    R        ++A + S DS  I   S+      + + + + 
Sbjct: 789 SED---TIDICDLASERVIRTLEGHSDRVNALAISSDSKLIASGSN---DNSVRIWKIDT 842

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
               + + +          SP  +L+A       + AI +      + +  V+   +++ 
Sbjct: 843 GALLQ-TLEHSGPIRSVGLSPNNELMASV---PRERAIWIWDAATGELQQKVDFDIIESS 898

Query: 396 TWSP 399
            +SP
Sbjct: 899 IFSP 902



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 73/212 (34%), Gaps = 13/212 (6%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + D    ++ +      +      FSP+ + VA+      D   V L D    +  + + 
Sbjct: 1000 LWDATTGSLLHTFEGYSRKSGTFSFSPDSKLVAF--RPQSDSTCVQLWDVETAQLYRTLE 1057

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            +    I    FS N ++   S+++   + I+  ++Q+        +    +  ++S   +
Sbjct: 1058 DHLDSIDRVMFSPNCQQLA-SIEEGGTITIW--NIQTGERMFSLESRGSWVCVAFSRSGA 1114

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            ++   S     + + V  +N    +   ++ +       + P   LI+     G    + 
Sbjct: 1115 KLATGS----YDTVRVWDANTGVLQLELKEHKTIVTAVAFLPDEKLISSGSNDG---KLC 1167

Query: 375  VMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLI 405
                   +  + L     +    +S  GR + 
Sbjct: 1168 FWDLSKGELSQTLHSSGAINQIVFSADGRLMA 1199



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 55/363 (15%), Positives = 122/363 (33%), Gaps = 50/363 (13%)

Query: 73   LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWD 132
            L+ S     +      + + +         W++       TG + +      +V+F + +
Sbjct: 849  LEHSGPIRSVGLSPNNELMASVPRERAIWIWDA------ATGELQQ------KVDFDIIE 896

Query: 133  --VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG--- 187
              +   ++I+    F+S          +SD I  ++  +    +     ++ S  S    
Sbjct: 897  SSIFSPERILEATGFNSA--------RLSDRILSTLFHKFDGSSRETWKLAVSPDSALLV 948

Query: 188  --IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  S+ + D   A  +         +   + SPN++ +   + D +    V L D  
Sbjct: 949  SCSDDGSVRLCDARIAATKPTIQGHSNEVAAIQLSPNRKLLGSVSSDHK----VLLWDAT 1004

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-MDIYSVDLQSNATER-LTNTLFI 303
                      +        FS + K      Q D   + ++  D+++    R L + L  
Sbjct: 1005 TGSLLHTFEGYSRKSGTFSFSPDSKLVAFRPQSDSTCVQLW--DVETAQLYRTLEDHLDS 1062

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                 +SP+  Q+   S  EG   + +      + +  S +   S+    +S  G  +A 
Sbjct: 1063 IDRVMFSPNCQQLA--SIEEGGT-ITIWNIQTGE-RMFSLESRGSWVCVAFSRSGAKLA- 1117

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +G    + V   +    +L +++    + A  + P  + +       G    KL   
Sbjct: 1118 ---TGSYDTVRVWDANTGVLQLELKEHKTIVTAVAFLPDEKLI-----SSGSNDGKLCFW 1169

Query: 422  DLN 424
            DL+
Sbjct: 1170 DLS 1172



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 84/243 (34%), Gaps = 30/243 (12%)

Query: 186  SGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            SG   NS+ +   D GA ++ L  S          SPN + +A           +++ D 
Sbjct: 828  SGSNDNSVRIWKIDTGALLQTLEHSGPIRSVG--LSPNNELMASV----PRERAIWIWDA 881

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                  +++     +I +  FS   +R L      EA    S  L       L +    +
Sbjct: 882  ATGELQQKV--DFDIIESSIFSP--ERIL------EATGFNSARLSDRILSTLFHKFDGS 931

Query: 305  ISASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               ++    SPDS+ +V  SD +G  +L    +  +  K   Q           SP   L
Sbjct: 932  SRETWKLAVSPDSALLVSCSD-DGSVRLC--DARIAATKPTIQGHSNEVAAIQLSPNRKL 988

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKL 418
            +           + +            E  + ++   ++SP  + + F R +   T  +L
Sbjct: 989  LGSVSSD---HKVLLWDATTGSLLHTFEGYSRKSGTFSFSPDSKLVAF-RPQSDSTCVQL 1044

Query: 419  YSI 421
            + +
Sbjct: 1045 WDV 1047


>gi|229089297|ref|ZP_04220577.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock3-42]
 gi|228694043|gb|EEL47726.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock3-42]
          Length = 654

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/281 (10%), Positives = 80/281 (28%), Gaps = 54/281 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     +       + P +S + K   
Sbjct: 24  NISDDGKNVAFVKRTVNWEDNTYRNHVWIYEKGKGQSYPLTTGDIDSIHPLWSPDSKSIA 83

Query: 274 ISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE------- 323
                 +      I+   L   +  ++T+      +  + P      + +  +       
Sbjct: 84  YLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDPTGKGFYYITQSKECEEIKK 143

Query: 324 -----------GKEQ---------LYVMQSNGSDQK------RISQDKEASYFDPVWSPQ 357
                      GKE          +  +  N  +++      +++  K+        S  
Sbjct: 144 RKELYGDFQHVGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTDGKDFYIHGFDISDN 203

Query: 358 GDLIAF----TKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS----- 407
           G  +      +        + ++  +  + + + ++     +  +SP G  + +S     
Sbjct: 204 GKKVVCMATPSLNDHMNGDLYILDVEAGELQKMNIDKLLGGSVCFSPEGNKICYSASIRE 263

Query: 408 ----RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               R    ++  ++Y ++   R   L +  +     QW  
Sbjct: 264 KEYYRNHIQESTLEIYDLNTGERIVPLTDFDSTVMPLQWTA 304



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 9/106 (8%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPS 400
           +      S  G  +AF K +        +  + + +K  G    L   D +   P WSP 
Sbjct: 19  TLSSTNISDDGKNVAFVKRTVNWEDNTYRNHVWIYEKGKGQSYPLTTGDIDSIHPLWSPD 78

Query: 401 GRSLIF-SRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVG 444
            +S+ + S   DGD  ++++   L+  +E  + +     S+ +W  
Sbjct: 79  SKSIAYLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDP 124



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 11/115 (9%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++ +        ++   +     P+WSP   
Sbjct: 22  STNISDDGKNVAFVKRTVNWEDNTYRNHVWIYEKGKGQSYPLTT-GDIDSIHPLWSPDSK 80

Query: 360 LIAFTKFSGE---KFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G+   K  I V   D  S+ ++  E   +    W P+G+   +  + 
Sbjct: 81  SIAYLSSGGDGDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDPTGKGFYYITQS 135



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 43/306 (14%), Positives = 108/306 (35%), Gaps = 58/306 (18%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDD 233
           + FV  +V       +N + + ++ G    Y   + D     P +SP+ + +AY ++  D
Sbjct: 32  VAFVKRTVNWEDNTYRNHVWIYEK-GKGQSYPLTTGDIDSIHPLWSPDSKSIAYLSSGGD 90

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
            D+     + +  D +  +I + +  +   R+   GK      Q                
Sbjct: 91  GDMKNQIFVKSLDDYSEVKITDEKEGVSNFRWDPTGKGFYYITQSKECEEIKKRKELYGD 150

Query: 278 ------KDEAMDIYSVDLQS-----------NATERLTNTLFINISAS-YSPDSSQIVFE 319
                 + +   +  ++++            N   +LT+     I     S +  ++V  
Sbjct: 151 FQHVGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTDGKDFYIHGFDISDNGKKVVCM 210

Query: 320 SDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFA-- 372
           +     +     LY++     + ++++ DK        +SP+G+ I ++     +++   
Sbjct: 211 ATPSLNDHMNGDLYILDVEAGELQKMNIDKLLG-GSVCFSPEGNKICYSASIREKEYYRN 269

Query: 373 ------IGVMKKDGSQERL-LVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 + +   +  +  + L +  +   P  W+  G  + +       T   +  +  +
Sbjct: 270 HIQESTLEIYDLNTGERIVPLTDFDSTVMPLQWTAKGILIRW----QDKTNYLIGLLAED 325

Query: 425 GRNETL 430
           G  ETL
Sbjct: 326 GTVETL 331


>gi|225555496|gb|EEH03788.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
          Length = 849

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 51/250 (20%), Positives = 84/250 (33%), Gaps = 25/250 (10%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   +   F+  +    + K  L     D   +R   P RD  L     S +   VA A+
Sbjct: 62  GIVATNDSFIMGAEDGTVWKYELETGQMDKLLVRCALPVRDLSL-----SKDGDWVAVAS 116

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               D L V +++       K + +    +    F  +G+   +S   D  + IYSVD  
Sbjct: 117 ----DELVVKIVNIHDMTIVKYLRDQSKGVKHVNFDPSGRYIAVSGS-DGIIYIYSVDGP 171

Query: 291 --------SNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
                        RL T+    +  A + PD+    F +    ++   V   + + Q   
Sbjct: 172 QPELVKKIDGIIGRLETDHEATSR-AVWHPDAR--AFAAVEPTRDIAIVSTRDWTKQNVF 228

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                A      WSP G L+A    SG    I + +          +  N+    W P  
Sbjct: 229 PAGHNADITALAWSPNGALLA---SSGADRQILLWETKTQNILRRYDIPNVINLAWHPVD 285

Query: 402 RSLIFSRKKD 411
            +L F+    
Sbjct: 286 NTLSFTTSDG 295


>gi|225468290|ref|XP_002267892.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 248

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 68/193 (35%), Gaps = 11/193 (5%)

Query: 185 VSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            S     +L      G  +        DQ + +  FS + + V  A+ D      V L D
Sbjct: 38  GSSSADKTLRTWSTSGDFSTLQEFHGHDQGISDLAFSSDSRHVCSASDDK----TVRLWD 93

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLF 302
                  K +    + +    F+      + S   DE + ++  D+++    + L     
Sbjct: 94  VETGSLIKTLQGHTNHVFCVNFNPQSNMIV-SGSFDETVRVW--DVKTGKCLKVLPAHSD 150

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              +A+++ D S IV  S  +G  +++   + G   K +  D+        +SP G  I 
Sbjct: 151 PVTAANFNRDGSLIV-SSSYDGLCRIWDAST-GHCMKTLIDDENPPVSFVKFSPNGKFIL 208

Query: 363 FTKFSGEKFAIGV 375
                    +I +
Sbjct: 209 VGTLDNTLVSIYL 221



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 77/209 (36%), Gaps = 16/209 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++    +  + +   +FS +   +   +   +  LR +          +  G+ + + 
Sbjct: 12  YKLKQTLTAHKRAVSAVKFSSDG--LLLGSSSADKTLRTWSTSGDFSTLQEFHGHDQGIS 69

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE 319
               FSS+ +    S   D+ + ++  D+++ +  +       ++   +++P S+ IV  
Sbjct: 70  DL-AFSSDSRHVC-SASDDKTVRLW--DVETGSLIKTLQGHTNHVFCVNFNPQSNMIVSG 125

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + V         ++            ++  G LI  + + G      +    
Sbjct: 126 SF---DETVRVWDVKTGKCLKVLPAHSDPVTAANFNRDGSLIVSSSYDG---LCRIWDAS 179

Query: 380 GSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
                + L++D N  +    +SP+G+ ++
Sbjct: 180 TGHCMKTLIDDENPPVSFVKFSPNGKFIL 208



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 50/158 (31%), Gaps = 26/158 (16%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWDV+    I   +  ++        H    +                   S  +VSG 
Sbjct: 90  RLWDVETGSLIKTLQGHTN--------HVFCVNFNPQ---------------SNMIVSGS 126

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              ++ V D        + P+    +    F+ +   +  ++Y   D L      +    
Sbjct: 127 FDETVRVWDVKTGKCLKVLPAHSDPVTAANFNRDGSLIVSSSY---DGLCRIWDASTGHC 183

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
               I +    +   +FS NGK  L+    +  + IY 
Sbjct: 184 MKTLIDDENPPVSFVKFSPNGKFILVGTLDNTLVSIYL 221


>gi|121997574|ref|YP_001002361.1| hypothetical protein Hhal_0781 [Halorhodospira halophila SL1]
 gi|121588979|gb|ABM61559.1| hypothetical protein Hhal_0781 [Halorhodospira halophila SL1]
          Length = 428

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/310 (14%), Positives = 105/310 (33%), Gaps = 47/310 (15%)

Query: 131 WDVKDRKQIIGKKFFSSPASW-RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           +D  +++ +   +   S  SW R ++H + D   QS      +F           ++ + 
Sbjct: 136 FDSNEQRYVA--RLRDSEGSWLRDLSHAVYDASAQSGLAVSINF---------ERLAQLR 184

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            +        GA     +   D +   P               D     + +    +   
Sbjct: 185 PDYGYFARAVGAAPPMPSDHEDGLWVVP--------------VDGSAPSLAVSLATLSDK 230

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R G+ R +   P     GK  +       Q      ++ +DL + + ++L +T  +  
Sbjct: 231 SGRKGDQRKVN-HPMLDPTGKHCVFLYRVFEQGRRHDSLWLLDLTTGSLDQLLDT-GMVS 288

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             ++      I +   ++GK+  Y +  +G   + +++ K   + D   S  G  +    
Sbjct: 289 HLAWYDTDWLIGYLRGQDGKDGYYWLDRSG-HLQPLAERKLDEHGDGHPSVHGRWVVTDT 347

Query: 366 F--SGEKFAIGVMKKDGSQE----------RLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +   G    + ++  +  +           R          P ++P G+++ F    +G 
Sbjct: 348 YPDKGRLQHLRLLDLETGRVEHVGSFFHGFRYAGPQRCDLHPRFAPDGQAIFFDSVHEGL 407

Query: 414 TGSKLYSIDL 423
              +LY +D+
Sbjct: 408 R--RLYCVDV 415



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 73/213 (34%), Gaps = 30/213 (14%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
                  RK+ H + D      TG+   F  R+         G   +SL ++D    ++ 
Sbjct: 231 SGRKGDQRKVNHPMLDP-----TGKHCVFLYRVF------EQGRRHDSLWLLDLTTGSLD 279

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--KRIGNFRSMILA 262
            L  +   ++    +  +   +       +     Y +D      P  +R  +       
Sbjct: 280 QLLDT--GMVSHLAW-YDTDWLIGYLRGQDGKDGYYWLDRSGHLQPLAERKLDEHG-DGH 335

Query: 263 PRFSSNGKRALISVQKDEAM--DIYSVDLQSNATERLTNTLF---------INISASYSP 311
           P     G+  +     D+     +  +DL++   E + +             ++   ++P
Sbjct: 336 PSVH--GRWVVTDTYPDKGRLQHLRLLDLETGRVEHVGSFFHGFRYAGPQRCDLHPRFAP 393

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           D   I F+S  EG  +LY +    +  + ++++
Sbjct: 394 DGQAIFFDSVHEGLRRLYCVDVRSTCPENLTEE 426



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF---------RSMILAPRFSSNGKRAL 273
            + V   TY D+  L+   +        + +G+F         +   L PRF+ +G+   
Sbjct: 340 GRWVVTDTYPDKGRLQHLRLLDLETGRVEHVGSFFHGFRYAGPQRCDLHPRFAPDGQAIF 399

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                +    +Y VD++S   E LT    
Sbjct: 400 FDSVHEGLRRLYCVDVRSTCPENLTEEYA 428


>gi|152967337|ref|YP_001363121.1| peptidase S9 prolyl oligopeptidase [Kineococcus radiotolerans
           SRS30216]
 gi|151361854|gb|ABS04857.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kineococcus radiotolerans SRS30216]
          Length = 619

 Score = 55.0 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 68/184 (36%), Gaps = 9/184 (4%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVD--LQSNAT--ERLTNTLFINISASYSPDSSQIVF 318
           P  + + +R      + +   ++  D  L   A    R+  +    +S S++ DS  +  
Sbjct: 29  PTMTPDARRVAFVSDRSDLPQLWVQDVVLDGPAPPARRIHLSEDPVVSVSWAADSRWLAC 88

Query: 319 ESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIG 374
                G  + +++V++ +G+D +RI+ +         W+  G  +  T     G+     
Sbjct: 89  AVAAGGGVRTEVWVVRPDGTDARRIAGEAHEHAELGPWTRSGHRVVVTFPATGGKPSRAF 148

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           +      +   L E   L     S   R L+    + G   + +    ++  ++ L+   
Sbjct: 149 LGDPATGRLDPLAEGGLLHVLDVSQEERFLVVVDGERGQQFAVVVDRLID-EHQPLLPHG 207

Query: 435 AYAS 438
           A  S
Sbjct: 208 ATGS 211



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 36/97 (37%), Gaps = 5/97 (5%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK--KDGSQE---RLLVEDSNLQAPTWSP 399
                + P  +P    +AF     +   + V     DG      R+ + +  + + +W+ 
Sbjct: 22  GAWGSWRPTMTPDARRVAFVSDRSDLPQLWVQDVVLDGPAPPARRIHLSEDPVVSVSWAA 81

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             R L  +    G   ++++ +  +G +   I   A+
Sbjct: 82  DSRWLACAVAAGGGVRTEVWVVRPDGTDARRIAGEAH 118



 Score = 43.1 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 15/140 (10%), Positives = 54/140 (38%), Gaps = 11/140 (7%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR---APKRIGNFRSMILAPRFSSNGKR 271
           + P  +P+ ++VA+ + D  D+ ++++ D  +D      +RI      +++  ++++ + 
Sbjct: 27  WRPTMTPDARRVAFVS-DRSDLPQLWVQDVVLDGPAPPARRIHLSEDPVVSVSWAADSRW 85

Query: 272 ALISVQKDEA--MDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIV--FESDREGK 325
              +V        +++ V        R+         +   ++    ++V  F +     
Sbjct: 86  LACAVAAGGGVRTEVWVVRPDGTDARRIAGEAHEHAELGP-WTRSGHRVVVTFPATGGKP 144

Query: 326 EQLYVMQSNGSDQKRISQDK 345
            + ++          +++  
Sbjct: 145 SRAFLGDPATGRLDPLAEGG 164



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 67/206 (32%), Gaps = 19/206 (9%)

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQII-------GKKFFSSPASW-----RKIAHTIS 159
            TGR+    +  L     + DV   ++ +       G++F              + H  +
Sbjct: 153 ATGRLDPLAEGGL---LHVLDVSQEERFLVVVDGERGQQFAVVVDRLIDEHQPLLPHGAT 209

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD--RDGAN-IRYLTPSRDQILFE 216
                ++       ++  ++V  +   G+ +  L  M    +G         +RD    E
Sbjct: 210 GSTDVALLRPAPAGDTGPVYVYLASDVGLPRRQLLGMPFGPNGYRGEAQTLAARDDAELE 269

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
                +   +    ++      + L DT         G    +   P  S +G+  ++ V
Sbjct: 270 FVDGDDAGTLLLLVWNVAGASELELFDTTTRERTPLRGMPGLVATDPVLSRDGRSVVLGV 329

Query: 277 QKDEAM-DIYSVDLQSNATERLTNTL 301
           +      +++ +D  +     +T++ 
Sbjct: 330 EGPLRPRELWHLDTATGEWTPVTHSS 355


>gi|311898993|dbj|BAJ31401.1| hypothetical protein KSE_56280 [Kitasatospora setae KM-6054]
          Length = 368

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 56/174 (32%), Gaps = 16/174 (9%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F++R   V               +  DG  +R    + D  ++   F+ +    A     
Sbjct: 193 FSTRTAIVDTRGWQFYDNLENFQLVEDGHPVR----ASDVNVWGVTFADDDSFYATVATG 248

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-----MDIYSV 287
                       R D A + +      +  P  S +G R     + D A       +Y +
Sbjct: 249 GR------THLVRGDLATRTLTTLHQNVECPSLSPDGTRVAYKKRVDGADPAAPWRLYVL 302

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           DL +           I+  A +S D   +++    +    L+ + ++G+    +
Sbjct: 303 DLATMTETATAEQRNIDDQALWS-DDRTLLYSMPGDYGSDLWTVPADGTGTPAV 355



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 67/239 (28%), Gaps = 40/239 (16%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            I    R SP+   V +  +   D        TR      R   F   +           
Sbjct: 163 GIPTRARVSPSGHLVGWTVFVSGDSYAGTNFSTRTAIVDTRGWQFYDNLEN--------- 213

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
               + +D                       +N+      D           G+  L   
Sbjct: 214 --FQLVEDGHPV---------------RASDVNVWGVTFADDDSFYATVATGGRTHLVRG 256

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-----KFAIGVMKKDGSQERLL 386
                    + Q+ E     P  SP G  +A+ K          + + V+      E   
Sbjct: 257 DLATRTLTTLHQNVE----CPSLSPDGTRVAYKKRVDGADPAAPWRLYVLDLATMTETAT 312

Query: 387 VEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            E  N+     WS   R+L++S    GD GS L+++  +G   T       A  P + G
Sbjct: 313 AEQRNIDDQALWS-DDRTLLYSM--PGDYGSDLWTVPADGTG-TPAVLARSAVAPAYAG 367



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 54/184 (29%), Gaps = 27/184 (14%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDS---SQIVFES--------------- 320
           D+      +D   +   R      I   A  SP        VF S               
Sbjct: 141 DDTYHASVLDASLHEVRRFPA-PGIPTRARVSPSGHLVGWTVFVSGDSYAGTNFSTRTAI 199

Query: 321 --DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
              R  +    +      +     +  + + +   ++      A     G      +++ 
Sbjct: 200 VDTRGWQFYDNLENFQLVEDGHPVRASDVNVWGVTFADDDSFYATVATGGRT---HLVRG 256

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSIDLNGRNETLINTPA 435
           D +   L     N++ P+ SP G  + + ++ DG       +LY +DL    ET      
Sbjct: 257 DLATRTLTTLHQNVECPSLSPDGTRVAYKKRVDGADPAAPWRLYVLDLATMTETATAEQR 316

Query: 436 YASD 439
              D
Sbjct: 317 NIDD 320


>gi|294667536|ref|ZP_06732751.1| peptidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535]
 gi|292602656|gb|EFF46092.1| peptidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535]
          Length = 779

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/314 (14%), Positives = 103/314 (32%), Gaps = 41/314 (13%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI-----------R 204
           H   D   Q  +  +G    R   V          ++   +  DG N+           R
Sbjct: 150 HCAPDARLQPTSRPRGFGVVRDPLVPADTTPRRSPDARWEVLADGWNLVLRHVADGRVTR 209

Query: 205 YLTPSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             +  R    F+P    +SP+ +++A          RV  ++       + + + + +  
Sbjct: 210 LSSDGRADDYFDPESVAWSPDSRQLAVYRVRPGLARRVTRVEAAPAGGGQPVVHTQ-LYP 268

Query: 262 APRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            P  + + +R  L ++           D+ +     L +  +      +  D   + FE 
Sbjct: 269 KPGDAVDVERPVLFALDGTRR------DVDTA----LFDNPYALSPLQWRSDGRSVAFEY 318

Query: 321 DREGKEQLYVMQSNGSDQK-RISQDKEAS---YFDPVWSPQ----GDLIAFTKFSGEKFA 372
            + G +++ V+  +    + R++  ++A    Y D  +       GD + +         
Sbjct: 319 VQRGFQRMRVIAVDAISARARVAVGEDARTFVYADRSFRHDVDGRGDEVVWVSERDGWRH 378

Query: 373 IGVMK-KDGSQERLLVEDSNLQAPTWSPSG--RSLIFSRKK----DGDTGSKLYSIDLNG 425
           + +   + G  +R L     +           R + F+             +LYS+D +G
Sbjct: 379 LYLFDGRSGKVKRQLTRGPWVVRDVLRVDDAQRRIWFTASGMDAGKDPYDRQLYSVDFDG 438

Query: 426 RNETLINTPAYASD 439
           R  T +       D
Sbjct: 439 RRLTRLTHAEADHD 452



 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 67/212 (31%), Gaps = 14/212 (6%)

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
             G  +  V  +L+        + +    +    R+   T   D   +++  +   + R 
Sbjct: 254 PAGGGQPVVHTQLYPKPGDAVDVERPVLFALDGTRRDVDTALFDNPYALSPLQWRSDGRS 313

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP----RFSPNQQKVAYATYDD 233
           +   E V  G  +  +  +D   A  R       +         R   + +        +
Sbjct: 314 V-AFEYVQRGFQRMRVIAVDAISARARVAVGEDARTFVYADRSFRHDVDGRGDEVVWVSE 372

Query: 234 EDILR-VYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEA------MDIY 285
            D  R +YL D R  +  +++     ++    R     +R   +    +A        +Y
Sbjct: 373 RDGWRHLYLFDGRSGKVKRQLTRGPWVVRDVLRVDDAQRRIWFTASGMDAGKDPYDRQLY 432

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           SVD       RLT+    +   + + D    V
Sbjct: 433 SVDFDGRRLTRLTHAEA-DHDVAIADDGLHYV 463


>gi|284053615|ref|ZP_06383825.1| WD-40 repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 986

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 65/171 (38%), Gaps = 14/171 (8%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+    S +L    S +G     +   D    ++ +D      + L +   +  S S+S 
Sbjct: 432 RLQGHTSSVLGVAVSPDGNFIA-TASNDHTAKVWGID--GLWLQNLPHQNSV-TSISFSE 487

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGE 369
           D SQ +  +  + +  ++V        + +      EA      +SPQGDLIA +     
Sbjct: 488 D-SQFLGTTTADNQVTIWVWDEQQQQFQYLHNLVGHEALVTRVKFSPQGDLIATSSNDNT 546

Query: 370 KFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
              I + + DG+  R+L      +    ++  G+ L        D   +L+
Sbjct: 547 ---IRLWRPDGTIIRVLEGHTDRVLDVEFNSDGQKLA---SAGKDKTVRLW 591



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/266 (17%), Positives = 93/266 (34%), Gaps = 28/266 (10%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    +L + D +           ++ +    FSP+ + +A  + DD     V +   
Sbjct: 632 VSGSSDRTLKIWDLEQQREIRTLKGHNEEVLTVLFSPDGEVIASGSRDD----TVKIWGF 687

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                   +   ++ + +  F+ + K  + S   D  + ++S      A   +  +    
Sbjct: 688 PDGSLLNTLVGHQNDVWSVAFTPDSKTIV-SASADTTVKLWSRSYTPEAKRVIEASDAAI 746

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVM-QSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            S S++PDS  I       G + L  M   N  DQ  +S   E     P      + ++ 
Sbjct: 747 WSLSFTPDSQGIA----TAGNDSLVKMWDLNQDDQSALSWQLEG-LGQPR---DLNWVSV 798

Query: 364 TKFS--------GEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
              +        G    I +   DG     L      + A  ++P  ++++ S   D   
Sbjct: 799 NSQTDQPLVATGGADNTIKLWTTDGEAIATLTGHTEPVNAIAFNP-SKNILASASSD--- 854

Query: 415 GSKLYSIDLNGRNETLINTPAYASDP 440
              +   D +G+    +  PA+ +D 
Sbjct: 855 -KNVIIWDYDGQLIETLRIPAFPNDG 879



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 76/225 (33%), Gaps = 15/225 (6%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V   DG  ++ L            FS + Q +   T D++  + V+    +  +    + 
Sbjct: 463 VWGIDGLWLQNLPHQNSVTSI--SFSEDSQFLGTTTADNQVTIWVWDEQQQQFQYLHNLV 520

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              +++   +FS  G     +   D  + ++  D        L       +   ++ D  
Sbjct: 521 GHEALVTRVKFSPQGDLIA-TSSNDNTIRLWRPD--GTIIRVLEGHTDRVLDVEFNSDGQ 577

Query: 315 QIVFESD----REGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSG 368
           ++         R    Q  ++ +     + +S D     +  D  ++P+ D I  +  S 
Sbjct: 578 KLASAGKDKTVRLWNRQGDLLATLSGHCEGVSSDSFDYCNIHDVSFNPKNDNILVSGSSD 637

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKD 411
               I     +  +E   ++  N +  T  +SP G  +    + D
Sbjct: 638 RTLKIW--DLEQQREIRTLKGHNEEVLTVLFSPDGEVIASGSRDD 680


>gi|284036695|ref|YP_003386625.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
 gi|283815988|gb|ADB37826.1| OmpA/MotB domain protein [Spirosoma linguale DSM 74]
          Length = 658

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 79/246 (32%), Gaps = 37/246 (15%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYL--MDTRIDRAPKRIG---NFRSMILAPRFSSNG 269
           + P  + ++Q + +     E    +     +      P  +    N          S++G
Sbjct: 197 YFPVLTADEQTLVFTALKPEGDEDLMTATFNGETWSPPVSLAASINTPENEGTASLSADG 256

Query: 270 KRALISVQKD----EAMDIYSVDLQSN------ATERLTNTLFINISASYSPDSSQIVFE 319
           +  + +  +      + D+Y      N            NT +     + S D  Q+ F 
Sbjct: 257 RTLVFTACQGRKGFGSCDLYVSRKTGNDWSSPDNLGPAINTRYYESQPALSADGRQLYFV 316

Query: 320 SDR---EGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSP----QGDLIAFTKFSG-- 368
           SDR   +G+  ++   + ++G+  + ++  +  +      SP     G  + F       
Sbjct: 317 SDRPGGKGRRDIWRSALGADGNWTEPVNLGEPVNTSANEASPFLHANGQSLFFASEGHIG 376

Query: 369 -EKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGDTGSK--- 417
              + + V     S              +        + +G    +S ++  D  S+   
Sbjct: 377 LGGYDLFVADNSPSGWSAPTNLGYPINTSEDQASLFVTANGTRAYYSFEEQKDGISQKSR 436

Query: 418 LYSIDL 423
           LY+ DL
Sbjct: 437 LYTFDL 442


>gi|296121706|ref|YP_003629484.1| hypothetical protein Plim_1451 [Planctomyces limnophilus DSM 3776]
 gi|296014046|gb|ADG67285.1| WD-40 repeat protein [Planctomyces limnophilus DSM 3776]
          Length = 756

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 73/218 (33%), Gaps = 24/218 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FS N   +            V L D +  R   ++G+    +LA   S +     +S+ 
Sbjct: 223 KFSRNGSVLLAGGGRGGQSGLVVLFDIKTGRRLAQVGSEYDTVLAADLSPD-----MSLV 277

Query: 278 KDEAMD--IYSVDLQSNAT----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                   +   ++ +       ++ T+      +  +SPD   +    DR     L V 
Sbjct: 278 ALGGPKKMLRVYEVSTGELLYESKKHTD---WVTAIEFSPDGVLLA-TGDRS--NGLVVW 331

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           ++    +         S  D  WSP  + +A +        +  M+  G  +        
Sbjct: 332 EAYTGREFYFLTGHTGSINDVSWSPDSNTLA-SGSEDGTIRLWEMQNGGQIKNFNAHGGG 390

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +QA  ++   R +        D  +KL+  D NG  + 
Sbjct: 391 VQALDFTLDVRIV----STGRDRVTKLF--DANGNKQR 422



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 77/231 (33%), Gaps = 36/231 (15%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISD-------------DIYQSITGE------- 169
           L+D+K  +++       S       A    D              +Y+  TGE       
Sbjct: 246 LFDIKTGRRL---AQVGSEYDTVLAADLSPDMSLVALGGPKKMLRVYEVSTGELLYESKK 302

Query: 170 KGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             D+ + I F  + V   +G   N L V +       Y        + +  +SP+   +A
Sbjct: 303 HTDWVTAIEFSPDGVLLATGDRSNGLVVWEAYTGREFYFLTGHTGSINDVSWSPDSNTLA 362

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D      + L + +     K        + A  F+ + +  ++S  +D    ++  
Sbjct: 363 SGSEDG----TIRLWEMQNGGQIKNFNAHGGGVQALDFTLDVR--IVSTGRDRVTKLF-- 414

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D   N       T  + +   YS ++ + V+  D  G  ++Y   +     
Sbjct: 415 DANGNKQRDFPATQDVGMEVCYSGETDR-VYAGDMAG--RVYAWNAKDGAV 462


>gi|229032004|ref|ZP_04187988.1| TolB domain protein [Bacillus cereus AH1271]
 gi|228729310|gb|EEL80303.1| TolB domain protein [Bacillus cereus AH1271]
          Length = 416

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/253 (15%), Positives = 90/253 (35%), Gaps = 61/253 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AYA    ++ L +Y ++     
Sbjct: 39  RHHDLWI-KIDGKEKQIT---KGEYITGPKWSHDGEWLAYAKGKKQNTLELYQLEDG--- 91

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++   +S +   ++S                 + + D++        NT F N+SA 
Sbjct: 92  --KKVRPSQSEVSNYQWSPKENIIAFVFMN----TLNTFDVKKK------NTDFENVSAG 139

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD  + +  S+       +     G+    + +D   +               
Sbjct: 140 VGDYAWYPDGKKFLVSSEAHILPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 195

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQ 393
                      WSP    I+F       +S +   + +++ DGS+     ++L+     +
Sbjct: 196 DFLALVASGFEWSPDQRWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNPQWFK 255

Query: 394 APTWSPSGRSLIF 406
              W+PS   L +
Sbjct: 256 ---WAPSNNILAY 265



 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 61/158 (38%), Gaps = 25/158 (15%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--L 328
           +       D  + I          +++T   +I     +S D   + +    +GK+Q  L
Sbjct: 34  KVAFIRHHDLWIKI------DGKEKQITKGEYI-TGPKWSHDGEWLAYA---KGKKQNTL 83

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV 387
            + Q     + R SQ + ++Y    WSP+ ++IAF   +    F +     D        
Sbjct: 84  ELYQLEDGKKVRPSQSEVSNY---QWSPKENIIAFVFMNTLNTFDVKKKNTDFENV---- 136

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKD----GDTGSKLYSI 421
             + +    W P G+  + S +      G TG++LY +
Sbjct: 137 -SAGVGDYAWYPDGKKFLVSSEAHILPTGWTGAQLYEV 173



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 18/96 (18%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       I        +E+ + +   +  P WS  G  L +++ K      +LY
Sbjct: 34  KVAFIRHHDLWIKID------GKEKQITKGEYITGPKWSHDGEWLAYAKGKK-QNTLELY 86

Query: 420 SIDLNGRNETLINTPAYASDPQWVG--------FMD 447
            ++ +G+      + +  S+ QW          FM+
Sbjct: 87  QLE-DGKKVR--PSQSEVSNYQWSPKENIIAFVFMN 119


>gi|260795813|ref|XP_002592899.1| hypothetical protein BRAFLDRAFT_65485 [Branchiostoma floridae]
 gi|229278123|gb|EEN48910.1| hypothetical protein BRAFLDRAFT_65485 [Branchiostoma floridae]
          Length = 444

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 71/195 (36%), Gaps = 16/195 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +L       ++   FSP+++++  ++ D    +R++ + T  +    +  N+   +   +
Sbjct: 182 WLLHGHTGPVYSTSFSPDREQLLTSSED--GTVRLWSLHTYSNLVVYKGHNYP--VWDVQ 237

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDRE 323
           FS  G    +S   D    ++  D Q                  Y P+S+ +    SDR 
Sbjct: 238 FSPTG-YYFVSAGHDRVARLWGTD-QFQPIRMFVGHYSDVTCVQYHPNSNYVATGSSDRT 295

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + +      +  R+    +A+     WSP G  +A            V+  D +  
Sbjct: 296 ----VRLWDVLNGNCVRVMTGHKAAVHTLAWSPDGRYLASAGVDKN-----VLLWDIAYG 346

Query: 384 RLLVEDSNLQAPTWS 398
           RLL E      P +S
Sbjct: 347 RLLAEMKGHTDPVYS 361



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 74/206 (35%), Gaps = 19/206 (9%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-N 299
           +MD +       +      + +  FS + +  L++  +D  + ++S+   SN       N
Sbjct: 172 MMDEKTAADSWLLHGHTGPVYSTSFSPD-REQLLTSSEDGTVRLWSLHTYSNLVVYKGHN 230

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQL-YVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               ++   +SP      F S   G +++  +  ++     R+     +      + P  
Sbjct: 231 YPVWDVQ--FSPTG--YYFVS--AGHDRVARLWGTDQFQPIRMFVGHYSDVTCVQYHPNS 284

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           + +A T  S     +  +  +G+  R++    + +    WSP GR L        D    
Sbjct: 285 NYVA-TGSSDRTVRLWDV-LNGNCVRVMTGHKAAVHTLAWSPDGRYLA---SAGVDKNVL 339

Query: 418 LYSIDLNGRNETLINTPAYASDPQWV 443
           L+ I        L+      +DP + 
Sbjct: 340 LWDIAYG----RLLAEMKGHTDPVYS 361


>gi|110640026|ref|YP_680236.1| WD repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110282707|gb|ABG60893.1| WD-40 repeat-containing protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 1097

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 47/161 (29%), Gaps = 11/161 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +     SP+ + +A  + D      V L D +     + +      +    F
Sbjct: 52  IQKGHSASVKAVAVSPDGKILATGSRDK----SVKLWDQQSGMEIRSLIGHDHTVNGLAF 107

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +GK    +   D    ++ + L                  +++PD     +    +  
Sbjct: 108 SPDGKLLA-TSSADGTARVWDI-LTGKEIFTSPKNSKYITDVAFNPDGKSFAYAGYPDSA 165

Query: 326 EQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAF 363
               +   +G   KR+   +           +S  G  +A 
Sbjct: 166 SIYAI--PSGKLIKRLEVNADQGSGYGISLKYSNDGKWLAI 204



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 64/196 (32%), Gaps = 24/196 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    S+ + D+            D  +    FSP+ + +A ++ D    +   L    
Sbjct: 74  TGSRDKSVKLWDQQSGMEIRSLIGHDHTVNGLAFSPDGKLLATSSADGTARVWDILTGKE 133

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT----NTL 301
           I  +PK        I    F+ +GK    +   D +  IY++       +RL        
Sbjct: 134 IFTSPKN----SKYITDVAFNPDGKSFAYAGYPD-SASIYAIP-SGKLIKRLEVNADQGS 187

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQ-G 358
              IS  YS D   +                +  ++  R S    A  F P   W    G
Sbjct: 188 GYGISLKYSNDGKWLA-----------IGEDNKTANVYRTSDWHLAYTFKPAEGWCGGCG 236

Query: 359 DLIAFTKFSGEKFAIG 374
             + F++ +   F I 
Sbjct: 237 TYVEFSRDNKSLFKIA 252



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 52/148 (35%), Gaps = 23/148 (15%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   +     R+   +L+        + R     + +     +SP G L+A +   G 
Sbjct: 66  SPDGKILA-TGSRDKSVKLW--DQQSGMEIRSLIGHDHTVNGLAFSPDGKLLATSSADGT 122

Query: 370 KFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                V      +E          +    ++P G+S  ++   D    + +Y+I  +G+ 
Sbjct: 123 A---RVWDILTGKEIFTSPKNSKYITDVAFNPDGKSFAYAGYPD---SASIYAIP-SGKL 175

Query: 428 ETLINTPA-----------YASDPQWVG 444
              +   A           Y++D +W+ 
Sbjct: 176 IKRLEVNADQGSGYGISLKYSNDGKWLA 203



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 68/211 (32%), Gaps = 32/211 (15%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                     ++DV+  +                     SD   +  +     F    L+
Sbjct: 482 ATGSWDASIEVYDVQTGEV-------------------SSDMYLKENSCYSISFTPNGLY 522

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +      G +  SL + + D   +         ++    F  +  K   A++D       
Sbjct: 523 LL----CGRLDKSLELREPDSKKVVLSFIGHTDVVSSIAFGADPNKALTASWDG----TA 574

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLT 298
            + D       ++    R M+ +  +S++ K+  I+   D  + I+  D+QS    + L 
Sbjct: 575 RIWDVTTGMMLQKFKGARGMLHSAIYSTDSKKI-ITGGDDRIIRIW--DIQSGQVLKTLN 631

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLY 329
                  S S S D   +V  S  +G  + +
Sbjct: 632 GHQSEITSLSLSKDGKMLVSYST-DGVVKFW 661


>gi|228473953|ref|ZP_04058694.1| dipeptidyl-peptidase IV [Capnocytophaga gingivalis ATCC 33624]
 gi|228274467|gb|EEK13308.1| dipeptidyl-peptidase IV [Capnocytophaga gingivalis ATCC 33624]
          Length = 722

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/396 (10%), Positives = 130/396 (32%), Gaps = 55/396 (13%)

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ--VLVTGRVIKEGKDRLRVEFR 129
           DL     F+ + ++           I R   +     +  +L+        +     +F 
Sbjct: 69  DLYN---FSTLEKEKTLFDTKKFPQIKRINSYTFNKQEDKILIATNKEPIFRRSFSADFY 125

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           ++D+K +                ++A      I + +   +GD  + +   +  +     
Sbjct: 126 VFDLKKQ----------------ELAKLTDKKIQEPLFSPQGDKVAYVYKNNIYIYDTQS 169

Query: 190 KNSLCVMDRDGANIRYLTPSRDQ-------ILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           K    V   DG   + +  + D        I+    ++ +  ++AY  +D+ ++    + 
Sbjct: 170 KKEQQVT-FDGEKNKIINGTSDWVYEEEFAIVRTFDWNADGTQLAYIRFDEHEVPEFSMD 228

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                  P +                      + +K+  + +Y  D+++    ++    +
Sbjct: 229 IYGTTLYPTKDTFKYPK---------------AGEKNSVVSLYLYDVKAGKPTQIPLDAY 273

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI- 361
                 ++ +++ +  ++    +    ++  + S +K  S   E        +     + 
Sbjct: 274 YIPRLQWTKEANILSVQTLNRHQNDFNIIFVDASTKKFKSVYHEVDKAYVSITDDLTFLD 333

Query: 362 ----AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTG 415
                 +        +    K+G   + + +      +   ++P  + + +   + G   
Sbjct: 334 DNSFIISSEKDGNNHLYHYDKNGKLIKQITQGKWEVTEYYGYNPKAKQIYYQSTEPGSIN 393

Query: 416 SKLYSIDLNGRNETLINTPAYASD----PQWVGFMD 447
             +YSI L+G+N+  + T    ++    P +  F++
Sbjct: 394 RGIYSIALSGKNKKGLATTEGTNEATFSPDFSLFIN 429


>gi|256390786|ref|YP_003112350.1| hypothetical protein Caci_1588 [Catenulispora acidiphila DSM 44928]
 gi|256357012|gb|ACU70509.1| hypothetical protein Caci_1588 [Catenulispora acidiphila DSM 44928]
          Length = 367

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 79/260 (30%), Gaps = 44/260 (16%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRF------S 266
           + +P +SP+  ++A+          + + +       +   N      + P +      S
Sbjct: 110 VHDPAWSPDGTRLAFID----GGGNLVVANADGSGRTEAAHNPGGQTWSHPTWQTTQADS 165

Query: 267 SNG----KRALISVQKDEAM-DIYSVDLQSNATERLTNTLFI---NISAS-----YSPDS 313
           ++          +     A     S D      ++L+   +    N   S     +    
Sbjct: 166 ADNLPPRNNIFFASTAGGATLWEVSTDAHDAQPKQLSLGGYPGQGNTPPSKTANDWPSGG 225

Query: 314 SQ---IVFESDREGKEQLYVMQ----SNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTK 365
            +    V+E +      +Y+        G    + + + +        + +G   + F +
Sbjct: 226 GRYGGAVYEHENGSSSDVYIRDDYLRQQGGLAIKNASEPDYVLVGSSATHEGTPEVVFVR 285

Query: 366 FSGEKFAIGVMKKDGS------QERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             G    + V     S        R L     ++   P  SP G+++ FS      +G  
Sbjct: 286 QVGAHKHVFVESIQTSTGGSAAAARDLTPHATTDCTEPAISPDGKTVAFSTS----SGVV 341

Query: 418 LYSIDLNGRNETLINTPAYA 437
             + D  G    + + P + 
Sbjct: 342 SVAADGTGNPAFVTHAPGFV 361



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/114 (12%), Positives = 37/114 (32%), Gaps = 16/114 (14%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY--- 309
           +F + +  P +S +G R       D   ++   +   +      +          ++   
Sbjct: 105 DFGTQVHDPAWSPDGTRLAFI---DGGGNLVVANADGSGRTEAAHNPGGQTWSHPTWQTT 161

Query: 310 ---SPDS---SQIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASYFDPVWS 355
              S D+      +F +   G   L+ + ++   +  K++S        +   S
Sbjct: 162 QADSADNLPPRNNIFFASTAGGATLWEVSTDAHDAQPKQLSLGGYPGQGNTPPS 215



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 4/55 (7%)

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA-SDPQW 442
            + +  P WSP G  L F    DG     + + D +GR E   N      S P W
Sbjct: 107 GTQVHDPAWSPDGTRLAFI---DGGGNLVVANADGSGRTEAAHNPGGQTWSHPTW 158



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 34/108 (31%), Gaps = 17/108 (15%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTW- 397
           S D      DP WSP G  +AF         + V   DGS                PTW 
Sbjct: 103 SVDFGTQVHDPAWSPDGTRLAFI---DGGGNLVVANADGSGRTEAAHNPGGQTWSHPTWQ 159

Query: 398 -----SPSG----RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                S        ++ F+    G T  ++ S D +      ++   Y
Sbjct: 160 TTQADSADNLPPRNNIFFASTAGGATLWEV-STDAHDAQPKQLSLGGY 206


>gi|242218901|ref|XP_002475236.1| hypothetical WD-repeat protein [Postia placenta Mad-698-R]
 gi|242218931|ref|XP_002475251.1| hypothetical WD-repeat protein [Postia placenta Mad-698-R]
 gi|220725568|gb|EED79549.1| hypothetical WD-repeat protein [Postia placenta Mad-698-R]
 gi|220725583|gb|EED79564.1| hypothetical WD-repeat protein [Postia placenta Mad-698-R]
          Length = 363

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 61/201 (30%), Gaps = 15/201 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FS +   VA  + D     R+ +           +      I    FS
Sbjct: 53  LHGHKDTITAIAFSRDGTLVATGSRDK----RIIVHHVPSLEREITLEGHTHSIKDVAFS 108

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREG 324
            + K  L+S   D  + ++S+        +L   +   + +   +SPD ++ V  S    
Sbjct: 109 PD-KTLLVSGSVDFTVRLWSL----TNGRKLAEGHHDAMVMKVGFSPDGTRFVSAS---A 160

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + V  +       +            +SP G  I      G+      +  D     
Sbjct: 161 DSTVCVWSTEDGAALSVLHGHMGVIHAMSFSPDGCRIVTGSDDGKAKVWRAVSGDC-LVT 219

Query: 385 LLVEDSNLQAPTWSPSGRSLI 405
           +      ++   +SP  + ++
Sbjct: 220 IDENAGVVRQAMFSPDNQYVL 240



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/182 (12%), Positives = 57/182 (31%), Gaps = 13/182 (7%)

Query: 183 SVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             VS    +++CV    DGA +  +      ++    FSP+  ++   + D +      +
Sbjct: 154 RFVSASADSTVCVWSTEDGAAL-SVLHGHMGVIHAMSFSPDGCRIVTGSDDGK----AKV 208

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-T 300
                      I     ++    FS + +     +     M     D  +    R+    
Sbjct: 209 WRAVSGDCLVTIDENAGVVRQAMFSPDNQ---YVLTAGTDMMARVNDSFTGERVRVIEGG 265

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           L +  + +++ D   +           + +  ++  D+       + +     +S  G  
Sbjct: 266 LDLQTATTFTLDGKYVAAG---GHDNAINIWNTDTGDRVARFLGHQDTVTCIRFSADGLR 322

Query: 361 IA 362
           + 
Sbjct: 323 VV 324



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 72/195 (36%), Gaps = 18/195 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSPN Q   +A    E  +      T  +     +   +  I A  FS +G     +  +
Sbjct: 26  FSPNGQ---FAVAGFEGPVSC----TWDNEVVNPLHGHKDTITAIAFSRDGTLVA-TGSR 77

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D+ + ++ V           +T  I   A +SPD + +V      G     V   + ++ 
Sbjct: 78  DKRIIVHHVPSLEREITLEGHTHSIKDVA-FSPDKTLLV-----SGSVDFTVRLWSLTNG 131

Query: 339 KRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPT 396
           +++++   +A      +SP G    F   S +        +DG+   +L      + A +
Sbjct: 132 RKLAEGHHDAMVMKVGFSPDGTR--FVSASADSTVCVWSTEDGAALSVLHGHMGVIHAMS 189

Query: 397 WSPSGRSLIFSRKKD 411
           +SP G  ++      
Sbjct: 190 FSPDGCRIVTGSDDG 204


>gi|15890484|ref|NP_356156.1| hypothetical protein Atu4501 [Agrobacterium tumefaciens str. C58]
 gi|15158719|gb|AAK88941.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 330

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 24/205 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P   ++A A Y+      V L        P  +  ++       FS +GK  + ++Q
Sbjct: 130 AFAPKGLRIAVARYNG-----VTLHWVATAGDPVDL-EWKGAHTGVTFSPDGKFLVTTMQ 183

Query: 278 KDEAMDIYSVDLQSNATE----RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           ++ A+  + ++      E    R+T       S S+S     +       G     V   
Sbjct: 184 EN-ALHGWKMEATKGGMEARHMRMTGYPAKVKSISWSVKGKWLA----SSGAPAAIVWPF 238

Query: 334 NGSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +G D       + +         +  + P  D++A     G    +GV   DG +  L  
Sbjct: 239 SGKDGPMGKAPEELGSRANIMATNVAFHPVEDVLAIGFIDG--MILGVRLADGKEALLRR 296

Query: 388 ED-SNLQAPTWSPSGRSLIFSRKKD 411
                + +  WS +G  L F+ +  
Sbjct: 297 PGKGAITSMDWSATGNLLAFASEAG 321


>gi|195995615|ref|XP_002107676.1| hypothetical protein TRIADDRAFT_49567 [Trichoplax adhaerens]
 gi|190588452|gb|EDV28474.1| hypothetical protein TRIADDRAFT_49567 [Trichoplax adhaerens]
          Length = 773

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 72/187 (38%), Gaps = 22/187 (11%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
           ++  R  K +   +  +LA R+S +G  AL++  +D  + I+S   +S      L     
Sbjct: 97  SKNGRVEKSVDAHKGAVLATRWSYDG-SALVTAGEDGHVKIWS---RSGMLRSTLNQAAS 152

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S  +SPDS Q++      GKE +       S   +  +  +       W+P  +LI 
Sbjct: 153 PVYSTVWSPDSDQVL---HTFGKELIIKPLQPTSKPIQ-WKAHDGVILKADWNPINNLII 208

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI---FSRKKDGDTG 415
                GE     V    G   RLL      + P    +WSP G       F+  +  D  
Sbjct: 209 ---SGGEDCKYKVWDSYG---RLLYASQAHEFPVTSLSWSPDGELFAVGLFNTLRLCDRR 262

Query: 416 SKLYSID 422
              YS+D
Sbjct: 263 GWSYSMD 269



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 79/243 (32%), Gaps = 23/243 (9%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +R  +   ++V+      + +  R G  +R         ++   +SP+  +V +     
Sbjct: 115 ATRWSYDGSALVTAGEDGHVKIWSRSGM-LRSTLNQAASPVYSTVWSPDSDQVLHTF--- 170

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + +   +    P +      +IL   ++      +IS  +D    ++  D     
Sbjct: 171 --GKELIIKPLQPTSKPIQWKAHDGVILKADWNPI-NNLIISGGEDCKYKVW--DSYGRL 225

Query: 294 TERLTNTLFINISASYSPDSSQIV---FESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                   F   S S+SPD        F + R    + +    +  +          S F
Sbjct: 226 LYASQAHEFPVTSLSWSPDGELFAVGLFNTLRLCDRRGWSYSMDKLNT--------GSIF 277

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFS 407
              WS  G  +A    +G+     V+++     + E  + +   +     S   + ++  
Sbjct: 278 SIAWSSDGTQLAGACGNGQVIFANVVERRLEWKNFEITITDSKTINVNDVSNDSKEILDF 337

Query: 408 RKK 410
           R +
Sbjct: 338 RDR 340


>gi|330998288|ref|ZP_08322113.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
 gi|329568677|gb|EGG50478.1| OmpA family protein [Paraprevotella xylaniphila YIT 11841]
          Length = 673

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 22/142 (15%)

Query: 299 NTLFINISASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQK-----RISQDKEAS 348
           N+ +   + ++SPD   + F       +     Q+Y  +   +         I++D  +S
Sbjct: 225 NSEYDEGACAFSPDGKTMYFTRCTHDPEYPRYAQIYTSERTDASWSAPKLLEITKDTLSS 284

Query: 349 YFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKD----GSQERL---LVEDSNLQAPTWS 398
           +  P  SP G  + F            I  ++      G  + L   +    N   P++ 
Sbjct: 285 FAHPTVSPDGRWLYFVSDMPGGLGGLDIWRIEIGEHGLGGVDNLGEPINTPGNEMFPSFR 344

Query: 399 PSGRSLIFSRKKD-GDTGSKLY 419
           P+G  L FS     G  G  L+
Sbjct: 345 PNGD-LYFSSDGHVGMGGLDLF 365



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 41/122 (33%), Gaps = 19/122 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLM------DTRIDRAPKRIGNFRSMILA---PRFSSN 268
            FSP+ + + +     +     Y              APK +   +  + +   P  S +
Sbjct: 234 AFSPDGKTMYFTRCTHDPEYPRYAQIYTSERTDASWSAPKLLEITKDTLSSFAHPTVSPD 293

Query: 269 GKRALISVQKD---EAMDIYSVDLQS---NATERL---TNTLFINISASYSPDSSQIVFE 319
           G+              +DI+ +++        + L    NT    +  S+ P+   + F 
Sbjct: 294 GRWLYFVSDMPGGLGGLDIWRIEIGEHGLGGVDNLGEPINTPGNEMFPSFRPNGD-LYFS 352

Query: 320 SD 321
           SD
Sbjct: 353 SD 354



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 43/118 (36%), Gaps = 20/118 (16%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFS-----GEKFAIGV---MKKDGSQERLL--VED--SN 391
           + E       +SP G  + FT+ +          I          S  +LL   +D  S+
Sbjct: 225 NSEYDEGACAFSPDGKTMYFTRCTHDPEYPRYAQIYTSERTDASWSAPKLLEITKDTLSS 284

Query: 392 LQAPTWSPSGRSLIFSRKKDGD-TGSKLYSIDLN----GRNETL---INTPAYASDPQ 441
              PT SP GR L F     G   G  ++ I++     G  + L   INTP     P 
Sbjct: 285 FAHPTVSPDGRWLYFVSDMPGGLGGLDIWRIEIGEHGLGGVDNLGEPINTPGNEMFPS 342



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 41/116 (35%), Gaps = 19/116 (16%)

Query: 264 RFSSNGKRALISV-----QKDEAMDIYS---VDLQSNATERL--T-NTLFINISASYSPD 312
            FS +GK    +      +      IY+    D   +A + L  T +TL      + SPD
Sbjct: 234 AFSPDGKTMYFTRCTHDPEYPRYAQIYTSERTDASWSAPKLLEITKDTLSSFAHPTVSPD 293

Query: 313 SSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDKE-----ASYFDPVWSPQGDL 360
              + F SD  G      ++ ++        +    E      +   P + P GDL
Sbjct: 294 GRWLYFVSDMPGGLGGLDIWRIEIGEHGLGGVDNLGEPINTPGNEMFPSFRPNGDL 349



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 58/197 (29%), Gaps = 23/197 (11%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRS 258
           +T         P  SP+ + + + +     +  + +    I               N   
Sbjct: 277 ITKDTLSSFAHPTVSPDGRWLYFVSDMPGGLGGLDIWRIEIGEHGLGGVDNLGEPINTPG 336

Query: 259 MILAPRFSSNGKRALISVQKD---EAMDIYSV--DLQSN----ATERLTNTLFINISASY 309
             + P F  NG     S         +D++    D          +   N+   + + ++
Sbjct: 337 NEMFPSFRPNGD-LYFSSDGHVGMGGLDLFKAEQDSAGTWTVENLKYPMNSQGDDFAMTF 395

Query: 310 SPDS-SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFS 367
             D      F S   G  + +    +    + +   K   Y    +  P+G L+      
Sbjct: 396 --DGLHNRGFFSTNRGDARGWDHIMSFECPEVLLTVKGWVYEKDGYELPEG-LVYMVGND 452

Query: 368 GEKFAIGVMKKDGSQER 384
           G    + V K DGS  +
Sbjct: 453 GTNLKLSV-KGDGSFTQ 468


>gi|328542430|ref|YP_004302539.1| WD-repeat family protein [polymorphum gilvum SL003B-26A1]
 gi|326412177|gb|ADZ69240.1| WD-repeat family protein [Polymorphum gilvum SL003B-26A1]
          Length = 324

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 75/193 (38%), Gaps = 18/193 (9%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+   +  +LA     +G   +      +   I  V      T             +  P
Sbjct: 41  RLAAHKGGLLAAEERPDGSGLV---TGGDDGLIRQVTADGRVTTLAERPRKWIDLVACGP 97

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             + + F S R      +V  ++G++++      E +     ++P+G  +A  ++ G   
Sbjct: 98  SGT-VAFASGRT----AWVRLADGTEKE---FSHERAVGGLAFAPKGLRLAVARYDGAT- 148

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +  +   G  ++L  + ++L A T+SP G+ L+ + +++   G +L     +G++  + 
Sbjct: 149 -LWWVNTLGKPQQLEWKGAHL-AITFSPDGKYLVTAMQENALHGWRL----KDGQDMRMT 202

Query: 432 NTPAYASDPQWVG 444
             PA      W  
Sbjct: 203 GYPAKVKSWSWSA 215



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 83/233 (35%), Gaps = 21/233 (9%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +  V   DG    +   S ++ +    F+P   ++A A YD   +  V  +       P
Sbjct: 107 RTAWVRLADGTEKEF---SHERAVGGLAFAPKGLRLAVARYDGATLWWVNTL-----GKP 158

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +++  ++   LA  FS +GK  + ++Q++ A+  +   L+     R+T       S S+S
Sbjct: 159 QQL-EWKGAHLAITFSPDGKYLVTAMQEN-ALHGWR--LKDGQDMRMTGYPAKVKSWSWS 214

Query: 311 PDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
                ++  S                 G +  ++    +A        P+ ++ A     
Sbjct: 215 AKGRYLM-TSGANAAIAWPFFGKTGPMGQNPLQLGSRGDALVTAVACHPKEEVAAVGYQD 273

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKL 418
           G    + + + + + E LL         +  W   G  L+F  +        L
Sbjct: 274 G---MVLICRFEDNAEVLLRRPGKAPVSSLAWDRGGERLVFGSEAGEAGIISL 323


>gi|213961981|ref|ZP_03390246.1| DPP IV [Capnocytophaga sputigena Capno]
 gi|213955334|gb|EEB66651.1| DPP IV [Capnocytophaga sputigena Capno]
          Length = 731

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 52/142 (36%), Gaps = 30/142 (21%)

Query: 219 FSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           FS +++K+  AT     Y    I   +L D       K++ + R  +  P FS NGK+  
Sbjct: 106 FSADEKKLLIATRKEDIYRHSFIADYFLYDLATGDL-KKVSDKRIQV--PTFSPNGKQLA 162

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTL------------------FINISASYSPDSSQ 315
              + +    +Y  DL +    ++T                      I    +++ D SQ
Sbjct: 163 FVYENN----LYLYDLATGEETQITTDGQKNAIINGTADWVYEEEFGIVKLFAWNADGSQ 218

Query: 316 IVFESDREGKEQLYVMQSNGSD 337
           + F    E K   + M   G D
Sbjct: 219 LAFIRSDERKVPEFSMDIYGYD 240



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/349 (13%), Positives = 112/349 (32%), Gaps = 55/349 (15%)

Query: 111 LVTGRVIKEGKDRLRV----------------EFRLWDVKDRKQIIGKKFFSSPASWRKI 154
           L TG + K    R++V                   L+D+   ++       ++      I
Sbjct: 136 LATGDLKKVSDKRIQVPTFSPNGKQLAFVYENNLYLYDLATGEE----TQITTDGQKNAI 191

Query: 155 AHTISDDIYQSITGEKGDFN-----SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            +  +D +Y+   G    F      S++ F+  S    + + S+ +   D     Y    
Sbjct: 192 INGTADWVYEEEFGIVKLFAWNADGSQLAFI-RSDERKVPEFSMDIYGYDLYPTPYKFKY 250

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
                     S +   +A  +  D  +   Y+   +    P ++                
Sbjct: 251 PKAGEANSAVSLHIYTLANQSVADIPLNAYYIPRLQWTNDPHKLTVQ------------- 297

Query: 270 KRALISVQKDEAMDIYS-VDLQSNATERLT-----NTLFINISASYSPDSSQIVFESDRE 323
                ++ + +       V+  +     L        + IN    + PD+S  +++S+++
Sbjct: 298 -----TLNRHQNDWQLVQVNSLTKEATTLAKETSATYVSINSDILFLPDNS-FIYQSEKD 351

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGS 381
           G    Y   + G   +++++          + P+   + +  T+    +  +  +   G 
Sbjct: 352 GHNHFYYCNAKGKLVRQLTRGNWEVTDCYGYDPKTQQLFYQSTQIGSTRRGLYAVSLKGK 411

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             R L  ++     T+S  G   ++       T    Y+++     + L
Sbjct: 412 APRALSTEAGTNKGTFS--GDFTMYIHAFANATTPPRYTLNDTKSGKQL 458



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 13/89 (14%)

Query: 354 WSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +S     +       + +         +        +  V D  +Q PT+SP+G+ L F 
Sbjct: 106 FSADEKKLLIATRKEDIYRHSFIADYFLYDLATGDLKK-VSDKRIQVPTFSPNGKQLAFV 164

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            +      + LY  DL    ET I T   
Sbjct: 165 YE------NNLYLYDLATGEETQITTDGQ 187


>gi|325279770|ref|YP_004252312.1| OmpA/MotB domain-containing protein [Odoribacter splanchnicus DSM
           20712]
 gi|324311579|gb|ADY32132.1| OmpA/MotB domain protein [Odoribacter splanchnicus DSM 20712]
          Length = 625

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 68/237 (28%), Gaps = 31/237 (13%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            ++ P      Q   +     E      +   + DR      + R    AP  +++G+  
Sbjct: 180 PVYWPALDVTGQTFLFTEQAGEQET---MWMLQGDRRYALNFSGRENYGAPSLTADGRMM 236

Query: 273 LISVQKDEA-MDIYSV----DLQSNATERLT---NTLFINISASYSPDSSQIVFESDREG 324
             S +      DIY      D   +    L    NT       + S D +++ F S REG
Sbjct: 237 YFSRENGRNSFDIYVAYRLSDTSWSEPVNLGAPVNTDGWEAQPAVSADGTRLYFASTREG 296

Query: 325 KEQ--------LYVMQSNG----SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---E 369
                      L   +++G    S  + +  +       P        + F         
Sbjct: 297 GRGGSDIWFSYLLRREADGRQLWSQPRCLYFNTGGDEMAPFLYFDNKTLFFASDGYAGMG 356

Query: 370 KFAIGVMKKDGSQERL---LVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSI 421
           +  I  +  +     L   +  ++      +     G+   FS    G      Y +
Sbjct: 357 RKDIYKVDVEQVTPPLNIGITVNTQRDEFGFMVDASGQWGYFSSDISGKRCIYRYRL 413



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 39/235 (16%), Positives = 72/235 (30%), Gaps = 39/235 (16%)

Query: 132 DVKDRKQIIGKKFFSSPASW-----RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           DV  +  +  ++       W     R+ A   S    ++        + R+++ S     
Sbjct: 187 DVTGQTFLFTEQAGEQETMWMLQGDRRYALNFSGR--ENYGAPSLTADGRMMYFSRENGR 244

Query: 187 GIIKNSLCVMDRDGANIRYLTPS----RDQILFEPRFSPNQQKVAYATYDDE-----DIL 237
                 +     D +    +        D    +P  S +  ++ +A+  +      DI 
Sbjct: 245 NSFDIYVAYRLSDTSWSEPVNLGAPVNTDGWEAQPAVSADGTRLYFASTREGGRGGSDIW 304

Query: 238 RVYLMDTRIDR-----APKRI-GNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVD 288
             YL+    D       P+ +  N     +AP    + K    +          DIY VD
Sbjct: 305 FSYLLRREADGRQLWSQPRCLYFNTGGDEMAPFLYFDNKTLFFASDGYAGMGRKDIYKVD 364

Query: 289 LQSNATERLTNTLFIN-------ISASYSPD--SSQIVFESDREGKEQLYVMQSN 334
           +     E++T  L I            +  D       F SD  GK  +Y  +  
Sbjct: 365 V-----EQVTPPLNIGITVNTQRDEFGFMVDASGQWGYFSSDISGKRCIYRYRLG 414


>gi|288926326|ref|ZP_06420250.1| OmpA family protein [Prevotella buccae D17]
 gi|288336931|gb|EFC75293.1| OmpA family protein [Prevotella buccae D17]
          Length = 684

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 13/108 (12%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKD----GSQERL---LVEDS 390
           I++D  +S+  P  SP G  + FT           I  ++      G  E L   +    
Sbjct: 273 ITRDTLSSFAHPAISPDGQWLYFTSDMPGGMGGLDIWRVRITAAGLGGVENLGEPVNTPG 332

Query: 391 NLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNET-LINTPAY 436
           N + PT+ P+G  L FS     G  G  ++    + +     ++ P Y
Sbjct: 333 NEEFPTFRPNGD-LYFSSDGHPGMGGLDIFIASADPQTRRYRLSHPGY 379



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 46/148 (31%), Gaps = 23/148 (15%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID----RAPKRIG---NFRS 258
           +T         P  SP+ Q + + +     +  + +   RI        + +G   N   
Sbjct: 273 ITRDTLSSFAHPAISPDGQWLYFTSDMPGGMGGLDIWRVRITAAGLGGVENLGEPVNTPG 332

Query: 259 MILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATE-RLT------NTLFINISAS 308
               P F  NG     S         +DI+           RL+      N+   +   +
Sbjct: 333 NEEFPTFRPNGD-LYFSSDGHPGMGGLDIFIASADPQTRRYRLSHPGYPLNSEGDDFGMT 391

Query: 309 Y-SPDSSQIVFESDR---EGKEQLYVMQ 332
           +  P +    F S+R    G + +Y   
Sbjct: 392 FEGPHNRGF-FSSNRRDGRGFDHIYSFD 418



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 8/60 (13%)

Query: 390 SNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLN----GRNETL---INTPAYASDPQ 441
           S+   P  SP G+ L F+     G  G  ++ + +     G  E L   +NTP     P 
Sbjct: 279 SSFAHPAISPDGQWLYFTSDMPGGMGGLDIWRVRITAAGLGGVENLGEPVNTPGNEEFPT 338


>gi|240277138|gb|EER40647.1| secreted dipeptidyl peptidase DppV [Ajellomyces capsulatus H143]
          Length = 720

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 94/312 (30%), Gaps = 77/312 (24%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           GK +    A  R  +  I D IY   T     + +       S             D D 
Sbjct: 149 GKLYNKEQAEKRYSSARIYDSIY---TRHWDTWLTPEFNAIFSGTLKKGYGHAYTFDGDL 205

Query: 201 ANIRYLTPSRDQILFEPRF--------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            N+  ++P +      P F        SP+ + VA+ +    ++ +  L  + I   P  
Sbjct: 206 HNL--VSPVKHAECPGPPFGGVGDYDLSPDGKTVAFMS-KAPELPKANLTTSYIFIVPH- 261

Query: 253 IGNFRSMILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                          +G      +   K  A     V   S              S ++S
Sbjct: 262 ---------------DGSSVAFPINGPKSGAAVNGIVGASS--------------SPAFS 292

Query: 311 PDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           PDS +I +      S    +  +YV   +GS    ++ + + S     W+P G+ +  + 
Sbjct: 293 PDSKKIAYLQMEERSYEADRRTVYVSTLDGSKIISLASNWDRSPDALKWAPDGESLYLSV 352

Query: 366 FSGEKFAIGVMKKDGS---------------------QERLLVEDSNLQAPTW----SPS 400
               +  +  +  D S                        +L   + + +       SP 
Sbjct: 353 EDRARGRLFTLPADASANYVPKISQTMVCSAFHFLKDSPSVLTTTTTIWSNAIYTIASPD 412

Query: 401 GR-SLIFSRKKD 411
            +  ++FS  + 
Sbjct: 413 EKPKILFSANEH 424



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 39/124 (31%), Gaps = 25/124 (20%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVED-------- 389
                 D   SP G  +AF   + E          I ++  DGS     +          
Sbjct: 221 PFGGVGDYDLSPDGKTVAFMSKAPELPKANLTTSYIFIVPHDGSSVAFPINGPKSGAAVN 280

Query: 390 ---SNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDP--- 440
                  +P +SP  + + + + ++    +    +Y   L+G     + +  +   P   
Sbjct: 281 GIVGASSSPAFSPDSKKIAYLQMEERSYEADRRTVYVSTLDGSKIISLASN-WDRSPDAL 339

Query: 441 QWVG 444
           +W  
Sbjct: 340 KWAP 343


>gi|218899523|ref|YP_002447934.1| tolB domain protein [Bacillus cereus G9842]
 gi|218544008|gb|ACK96402.1| tolB domain protein [Bacillus cereus G9842]
          Length = 410

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 83/244 (34%), Gaps = 59/244 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG  I+     + + +  P++S + + +AY     + IL +Y +     +
Sbjct: 35  RHHNLWI-KVDGKEIQIT---KGEYITGPKWSYDGEWLAYVKGKKQSILELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 + + D++        N  F N+SA 
Sbjct: 86  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLNTFDVEKK------NADFENVSAG 135

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD    +  S+       +     G+    + +D   +               
Sbjct: 136 VGDYAWYPDGKNFLVSSEANLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 191

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNL 392
                      WSP    I+F       +S +   + +++ DGS      + LL E    
Sbjct: 192 DFLALVASGFKWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNEQWFQ 251

Query: 393 QAPT 396
            +P+
Sbjct: 252 WSPS 255


>gi|220917718|ref|YP_002493022.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955572|gb|ACL65956.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 735

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 57/192 (29%), Gaps = 54/192 (28%)

Query: 258 SMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATE-------------------- 295
                 + S +G+ AL   S  +  A  +   DL +  T                     
Sbjct: 41  GRPTGVQLSPDGRTALFLRSGPRSRAQALLETDLATGVTRTVVEADGAGALSPEEAARLE 100

Query: 296 --RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             R+T    I      SPD +++V+        +L+++  +      +         DP 
Sbjct: 101 RQRIT-ARGI-THFVLSPDGARVVY----GLGGRLWLLDRSAGRAAPL--PGSEGALDPR 152

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQAP 395
           +SP G  +A+ K       + V       ER L                        +  
Sbjct: 153 FSPDGRALAYVKRGD----LYVRAVPRGPERRLTRARGPQVTNGLAEFVAQEEMDRDEGF 208

Query: 396 TWSPSGRSLIFS 407
            WSP  R + ++
Sbjct: 209 WWSPDARRIAYA 220



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 53/184 (28%), Gaps = 45/184 (24%)

Query: 220 SPNQQKVAYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAP--------------- 263
           SP+ +   +         +  L  D         +    +  L+P               
Sbjct: 49  SPDGRTALFLRSGPRSRAQALLETDLATGVTRTVVEADGAGALSPEEAARLERQRITARG 108

Query: 264 ----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                 S +G R +  +       ++ +D  +     L  +    +   +SPD   + + 
Sbjct: 109 ITHFVLSPDGARVVYGL----GGRLWLLDRSAGRAAPLPGSEGA-LDPRFSPDGRALAYV 163

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQGDLIAF 363
                +  LYV       ++R+++ +     + +                WSP    IA+
Sbjct: 164 K----RGDLYVRAVPRGPERRLTRARGPQVTNGLAEFVAQEEMDRDEGFWWSPDARRIAY 219

Query: 364 TKFS 367
            +  
Sbjct: 220 AEVD 223



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 78/256 (30%), Gaps = 46/256 (17%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD------EDILRVYLMDTR 245
            L ++DR       L  S      +PRFSP+ + +AY    D             L   R
Sbjct: 128 RLWLLDRSAGRAAPLPGSEG--ALDPRFSPDGRALAYVKRGDLYVRAVPRGPERRLTRAR 185

Query: 246 IDRAPKRIGNFRSMILAPR-----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +    +  F +     R     +S + +R   +           VD +S    R+   
Sbjct: 186 GPQVTNGLAEFVAQEEMDRDEGFWWSPDARRIAYA----------EVD-ESAVERRMLCD 234

Query: 301 LFINISASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQKRISQD--KEASYFDPVW 354
                            +   R G      +L V+ + G     +  D  +        W
Sbjct: 235 PARPARP-----CEARAYP--RAGTPNAAVRLKVVPAAGGPAVEMRWDAGRYPYLAAVRW 287

Query: 355 SPQG--DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIF 406
           S  G   L+   +   E+  +      G+   LL E  +         P + P GR   +
Sbjct: 288 SKGGPLALLVQDRLQREERLLAADPATGATRALLAERDDAWLNLWPGMPAFLPDGRF-WW 346

Query: 407 SRKKDGDTGSKLYSID 422
             ++ G    +L + D
Sbjct: 347 VTERGGAPEVELRAPD 362



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 44/293 (15%), Positives = 83/293 (28%), Gaps = 34/293 (11%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            +      +  ++  +       A        R   L   R+S             +   
Sbjct: 246 AYPRAGTPNAAVRLKVVPAAGGPAVEMRWDAGRYPYLAAVRWSKGGPLALLVQDRLQREE 305

Query: 238 RVYLMDTRIDRAPKRIGNFRSMIL-----APRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           R+   D         +       L      P F  +G+   ++ ++  A ++        
Sbjct: 306 RLLAADPATGATRALLAERDDAWLNLWPGMPAFLPDGRFWWVT-ERGGAPEVELRAPDGA 364

Query: 293 ATERLTNTLFINISASYSP----DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                   L +     Y+     D   +VF    +   +       GS  +R++  +   
Sbjct: 365 RL-----GLAVPRELGYAAFAGVDGDALVFAGAPDPTREELYRVRPGSAPERLALGEPGP 419

Query: 349 YFDPVW-SPQGDLIAFTKFSGEKFAI-GVMKKDGSQERLLVEDSNLQAPTWSP------- 399
                  +P G  +A T  +  +  +  V   DG   RL V  S  + P + P       
Sbjct: 420 ATRKAVLAPCGGNVAVTWSTLRRLPVTAVFAADG--ARLAVLPSVAEEPAFVPTTELRQL 477

Query: 400 ---SGRSLIFSRKKDGDTGSKL-YSIDLNGRNETLINTPAYASDP----QWVG 444
               G      R +    G++L   +D+ G        P  A  P    QW+ 
Sbjct: 478 GGADGIRAAVLRPRALGAGARLPVVVDVYGGPVPAYYVPQVAHRPMLIEQWLA 530


>gi|162146645|ref|YP_001601104.1| dipeptidyl peptidase IV [Gluconacetobacter diazotrophicus PAl 5]
 gi|161785220|emb|CAP54766.1| dipeptidyl peptidase IV [Gluconacetobacter diazotrophicus PAl 5]
          Length = 757

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 72/240 (30%), Gaps = 72/240 (30%)

Query: 252 RIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----- 305
           R+ +      +APR S +G         D    +Y V   S  T RLT+    +      
Sbjct: 159 RVSDVPGRGWIAPRLSPDGAHVAAVRDND----VYVVAPGSGDTVRLTHG-GTDTLTHGL 213

Query: 306 -------------SASYSPDSSQIVFE-SDREGKEQLYVMQS------------------ 333
                           +SPD   +++E +D  G E+ Y+                     
Sbjct: 214 AEFAAAEELSRPDGLWWSPDGQSLLYEEADTSGVEKHYIADPQHPSIAPVEFRYPRAGTA 273

Query: 334 -----------NGSDQKRISQDKEA-SYFDPVWSPQGD----LIAFTKFSGEKFAIGVMK 377
                       G   + ++ D  A  Y   V  P+G     L+   +   ++  + V  
Sbjct: 274 NARIRLGLVARTGGPTRWVTWDNAAFPYLARVVWPKGRGPLSLVVLNRAQTQEKVLRVDP 333

Query: 378 KDGSQERLL-------------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             G    LL              E      P W P G   +++ ++DG    +L   D  
Sbjct: 334 ATGLTTTLLDEHDPAWINITPAGEGRGHALPRWLPDGSGFLWAAERDGRWPLQLRPADGT 393



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 82/288 (28%), Gaps = 42/288 (14%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H I+D  + SI   +        F      +   +  L ++ R G   R++T       +
Sbjct: 250 HYIADPQHPSIAPVE--------FRYPRAGTANARIRLGLVARTGGPTRWVTWDNAAFPY 301

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
                     +A   +         ++  R     K +    +  L              
Sbjct: 302 ----------LARVVWPKGRGPLSLVVLNRAQTQEKVLRVDPATGLTTTL---------- 341

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + + +   I            L           + PD S  ++ ++R+G+  L +  ++G
Sbjct: 342 LDEHDPAWINITPAGEGRGHAL---------PRWLPDGSGFLWAAERDGRWPLQLRPADG 392

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVEDSNLQA 394
           +    ++                  +  T      + AI  +   G     L  +  L A
Sbjct: 393 TLDHAVTPPDLPFVSLDDVDADAGTVTVTANPDRIRTAIYRLDLHGGTPVKLGTEPGLHA 452

Query: 395 PTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             ++  G    F     G D  +     D +G    L   PA A  P 
Sbjct: 453 TAFA-EGGHARFVDSVTGADGSAATVVRDRDG--HVLATVPAVAETPT 497


>gi|157867446|ref|XP_001682277.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68125730|emb|CAJ03460.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 661

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 75/220 (34%), Gaps = 24/220 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP +   A  + +D     + L +  +             I++  FS +GK    +  
Sbjct: 374 ALSPAETDFASCSNED---ASITLNNFGVGSEVGIFTGHHDTIISATFSPDGKYLA-TAS 429

Query: 278 KDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSN 334
           KDE M ++ V   +     LT     + I   + PDS  +V      G       +  + 
Sbjct: 430 KDEMMILWDV---TTTKILLTFAHPKVVICCCFGPDSKHLV-----SGCQDRVCRLWDTK 481

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              +     + E       +SP G+ +  +  +     +       ++ RLL     + +
Sbjct: 482 RGREWMNYTEHEGIIIAIAFSPDGNYVC-SASADRSLRVWSATTAKTRFRLLGHVGIILS 540

Query: 395 PTWSPSGRSLI--------FSRKKDGDTGSKLYSIDLNGR 426
            +++  GR +I            +DG     L  +D+ G 
Sbjct: 541 CSYTSDGRHIISNDESLLRVWSAEDGSCKLSLSPVDVAGT 580



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 71/194 (36%), Gaps = 21/194 (10%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L DT+  R          +I+A  FS +G     S   D ++ ++S         RL   
Sbjct: 477 LWDTKRGREWMNYTEHEGIIIAIAFSPDGNYVC-SASADRSLRVWSATTA-KTRFRLLGH 534

Query: 301 LFINISASYSPDSSQIVFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           + I +S SY+ D   I+          S  +G  +L +   + +   +++       +  
Sbjct: 535 VGIILSCSYTSDGRHIISNDESLLRVWSAEDGSCKLSLSPVDVAGTLQLNHRAPKLGWTL 594

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW---SPSGRSLIFSRK 409
             +  G    F   +     + V+  D  +E   V  +  +AP +   + S   + F   
Sbjct: 595 SSAAPGSFTRFVLVACNNRFVYVIDIDTGRE---VASTFCKAPVYCLTAGSHEKMAF--- 648

Query: 410 KDGDTGSKLYSIDL 423
             GD+   +Y + L
Sbjct: 649 --GDSFGNIYILRL 660


>gi|73978181|ref|XP_532646.2| PREDICTED: similar to WD repeat domain 51B [Canis familiaris]
          Length = 833

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 90/254 (35%), Gaps = 12/254 (4%)

Query: 160 DDIYQSITGEKGDFNSRILFVS--ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           D + +          + + F    + + +      L + +       +       ++   
Sbjct: 362 DPVLERYFKGHKAAITSVDFSPSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSV 421

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FSP    +A A+ D    +R+++ D R   +  +       + +  FS++G+    +  
Sbjct: 422 QFSPLGNLLASASRD--RTVRLWIPDKRGKSSEFKAHTAP--VRSVDFSADGQFLA-TAS 476

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D+++ ++++  Q      L         A +SPD   IV  S+    + + +  +    
Sbjct: 477 EDKSIKVWNMYRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSE---DKTIKIWDTTNKQ 532

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 D         ++P G  IA +  S     I  ++ +   +   V    +   ++
Sbjct: 533 CVNNFSDSVGFANFVDFNPNGTCIA-SAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSF 591

Query: 398 SPSGRSLIFSRKKD 411
            PSG  +I +    
Sbjct: 592 HPSGNYIITASSDG 605



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 9/165 (5%)

Query: 244 TRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           TRI   P     F+     I +  FS +GK+   +   D  + +++   Q+ A   +   
Sbjct: 357 TRISEDPVLERYFKGHKAAITSVDFSPSGKQLA-TASWDTFLMLWNCKPQARAFRYV-GH 414

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             +  S  +SP  + +   S R+   +L++    G   +   +   A      +S  G  
Sbjct: 415 KDVVTSVQFSPLGNLLASAS-RDRTVRLWIPDKRGKSSE--FKAHTAPVRSVDFSADGQF 471

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +A T    +   +  M +      L      ++   +SP GR ++
Sbjct: 472 LA-TASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 515


>gi|47229301|emb|CAG04053.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 490

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 69/210 (32%), Gaps = 15/210 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    D ++    + P+  K A A  DD     + + + +    P      +  + A +
Sbjct: 141 QVLNWSDCVVRAFAWHPHTDKFAVALMDD----SIKIYNPKSATTPTLKHRLQRNVAAVQ 196

Query: 265 FSSNGKRALISVQKD----EAMDIYSVD--LQSNATERLTN-TLFINISASYSPDSSQIV 317
           +      AL    ++      +D  S+     S   + L++       S ++SP  S ++
Sbjct: 197 WKPLCASALAVACQNCVLVWHVDPCSLSTRPSSGCAQVLSHPGHSPVTSIAWSPSGSLLL 256

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S  +    + V          + +          WSP G  +         F +   +
Sbjct: 257 SASPMD--TTMMVWDVASESCVPLQRVGGGGVSFLSWSPDGSHVL-ASTPSALFRVWETR 313

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                ER        Q+  WSP G  L+FS
Sbjct: 314 MWT-CERWPCLKGRCQSGCWSPDGSRLLFS 342



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 69/199 (34%), Gaps = 29/199 (14%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + L+      +    +SP+   +  A+   +  + V+ + +      +R+G     +  
Sbjct: 232 AQVLSHPGHSPVTSIAWSPSGSLLLSAS-PMDTTMMVWDVASESCVPLQRVG--GGGVSF 288

Query: 263 PRFSSNGKRALIS----VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +S +G   L S    + +     +++        ER         S  +SPD S+++F
Sbjct: 289 LSWSPDGSHVLASTPSALFRVWETRMWTC-------ERWPCLKGRCQSGCWSPDGSRLLF 341

Query: 319 ESDREGKEQLY--VMQSNGSDQKRISQDKEASYFDPVWS------PQGDLIAFTKFSGEK 370
               +G+  +Y              S+  +A+      S      P GD++      G +
Sbjct: 342 SV--QGEMVIYALTFSETPGPPTGTSKGPQAAAVVADLSETTFSTPDGDIVV-----GGE 394

Query: 371 FAIGVMKKDGSQERLLVED 389
                    G +  +L++ 
Sbjct: 395 IQSLAWDPTGERLAVLLKG 413



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 31/116 (26%), Gaps = 8/116 (6%)

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            + +    + +S    +      WSP G L+           +  +  +       V   
Sbjct: 225 TRPSSGCAQVLSHPGHSPVTSIAWSPSGSLLLSASPMDTTMMVWDVASESCVPLQRVGGG 284

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN--ETLINTPAYASDPQWVG 444
            +   +WSP G  ++        T S L+ +        E             W  
Sbjct: 285 GVSFLSWSPDGSHVL------ASTPSALFRVWETRMWTCERWPCLKGRCQSGCWSP 334



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 65/216 (30%), Gaps = 26/216 (12%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             ++ V D    +   L       +    +SP+   V  +T          + +TR+   
Sbjct: 262 DTTMMVWDVASESCVPLQRVGGGGVSFLSWSPDGSHVLAST----PSALFRVWETRMWTC 317

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------FI 303
            +     +    +  +S +G R L SVQ +  +   +           +           
Sbjct: 318 ERWPC-LKGRCQSGCWSPDGSRLLFSVQGEMVIYALTFSETPGPPTGTSKGPQAAAVVAD 376

Query: 304 NISASYS-PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               ++S PD   +V      G+ Q       G     + +    +   P       +  
Sbjct: 377 LSETTFSTPDGDIVV-----GGEIQSLAWDPTGERLAVLLKGDPLAADQPAI-----IAV 426

Query: 363 FTKFSGEKFAI----GVMKKDGSQERLLVEDSNLQA 394
           F   S   F +     V  + G++ RL+    N Q 
Sbjct: 427 FKTRSRPIFELLPCGFVQGEAGAEPRLMQFHPNFQH 462


>gi|296211816|ref|XP_002752569.1| PREDICTED: aladin isoform 2 [Callithrix jacchus]
          Length = 513

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 98/300 (32%), Gaps = 35/300 (11%)

Query: 135 DRKQIIGKKFFSSPASWR------KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           + + + G  + S P  +R       I H   D +    T  + D  +R  F+        
Sbjct: 22  NNELVTGSSYESPPPDFRGQWINLPILHLAKDPL---KTPGRLDHGTRTAFIHHREQVWK 78

Query: 189 IKNSLC-----------VMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATYDDED 235
              ++            + + +     ++  +    L   R+  S +     + +   ED
Sbjct: 79  RCINIWRDVGLFGVLNEIANSEEEVFEWVKTASGWALALCRWASSLHGSLFPHLSLRSED 138

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           ++  +   T     P      +  + A  +       L    +   + I+++D  S +T 
Sbjct: 139 LIAEFAQVTNCTIVPSLKHRLQRNVAALAWKPLSASVLAVACQS-CILIWTLDPTSLSTR 197

Query: 296 ------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                 ++ +        S +++P   +++  S  +    + V   +      +   +  
Sbjct: 198 PSSGCAQMLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIRVWDVSTETCVPLPWFRGG 255

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
              + +WSP G  +  T  S   F +   +     ER        Q   WSP G  L+F+
Sbjct: 256 GVTNLLWSPDGSKVLATTPS-AVFRVWEAQMWT-CERWPTLSGRCQTGCWSPDGNRLLFT 313


>gi|283851468|ref|ZP_06368749.1| conserved hypothetical protein [Desulfovibrio sp. FW1012B]
 gi|283573206|gb|EFC21185.1| conserved hypothetical protein [Desulfovibrio sp. FW1012B]
          Length = 422

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/233 (19%), Positives = 72/233 (30%), Gaps = 50/233 (21%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            + P F P  + VA         +R  L D  I    K      +   AP F     +  
Sbjct: 194 CWNPAFDPAGKHVATT-------IRRTLYDYSIAVDGKAWTGAYACAWAPVFHPATGQVA 246

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV---------FESDREG 324
             V+K  A  +   D+      R T         +YSPD + +          F     G
Sbjct: 247 APVRKAGAWGMAVDDVM-AWEPRFTQIWHQ----AYSPDGAILAAIVAPKFGEFTVAIGG 301

Query: 325 KE--------QLYVMQSNGSDQKRISQDKEASY----------------FDPVWSPQGDL 360
           +            V+   G     +S +  A++                + PV+SP G  
Sbjct: 302 QPWDITFPVVTDLVVSPQGGRVAALSSENNANFAVICDGKVWNGRYDMAWPPVFSPDGKH 361

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +A T   G K+    +  DG       +      P +SP G  ++     DG 
Sbjct: 362 LAVTVRQGGKY---TVLCDGKAYAQSFD--RCFDPAFSPDGTHVLIRGIADGK 409



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 63/199 (31%), Gaps = 51/199 (25%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P F   GK    ++++      YS+ +   A    T       +  + P + Q+     +
Sbjct: 197 PAFDPAGKHVATTIRRTLYD--YSIAVDGKA---WTGAYACAWAPVFHPATGQVAAPVRK 251

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----------FTKFSGEKFA 372
            G   + V      + +          +   +SP G ++A               G+ + 
Sbjct: 252 AGAWGMAVDDVMAWEPR------FTQIWHQAYSPDGAILAAIVAPKFGEFTVAIGGQPWD 305

Query: 373 IG-------VMKKDGSQERLLVEDSNLQA------------------PTWSPSGRSLIFS 407
           I        V+   G +   L  ++N                     P +SP G+ L  +
Sbjct: 306 ITFPVVTDLVVSPQGGRVAALSSENNANFAVICDGKVWNGRYDMAWPPVFSPDGKHLAVT 365

Query: 408 RKKDGDTGSKLYSIDLNGR 426
            ++ G      Y++  +G+
Sbjct: 366 VRQGGK-----YTVLCDGK 379



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 23/82 (28%), Gaps = 8/82 (9%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
             R  + + P FSP+ + +A                  +    K           P FS 
Sbjct: 344 NGRYDMAWPPVFSPDGKHLAVTVRQGGKY--------TVLCDGKAYAQSFDRCFDPAFSP 395

Query: 268 NGKRALISVQKDEAMDIYSVDL 289
           +G   LI    D  +      +
Sbjct: 396 DGTHVLIRGIADGKVYRIVAPV 417



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 77/224 (34%), Gaps = 30/224 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           + L EP  SP+ + VA      +    + +     ++   +I         PRFS +G+ 
Sbjct: 28  EWLEEPYVSPDGETVAMVAALPDAEFSLAVNGEVWEQTFDKI-------WYPRFSPDGRL 80

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL--- 328
             +     E    +++ +     E   +         +S     I      +GK  L   
Sbjct: 81  TALVQSAGE----WTMAVDGEPWE---DQYGYIWGTLFSKAGDVIAAPIQVDGKYGLVSN 133

Query: 329 ---YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
              +    + ++Q  +S D  A+       P    +A       +  I  +  +G     
Sbjct: 134 GVAWETLYDNANQVVLSADGSATAAVVQVKP----LAQADIETFQQGIFSVAVNGVAWDS 189

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +    N   P + P+G+ +  + ++        YSI ++G+  T
Sbjct: 190 IF--VNCWNPAFDPAGKHVATTIRRTLYD----YSIAVDGKAWT 227


>gi|255007785|ref|ZP_05279911.1| putative dipeptidyl peptidase [Bacteroides fragilis 3_1_12]
          Length = 736

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 57/457 (12%), Positives = 135/457 (29%), Gaps = 117/457 (25%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F+        + I     +P  + +    A+     +      + + V   
Sbjct: 26  DLKEINSGKFSP-------ENIYGVVPMPDGEHYTQRNAEGTQIVKYSFRTGEPVEV--- 75

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             L+  +    
Sbjct: 76  VFDVAKARECPFKKFDSYQFSPDGSKILIATETTPIYRHSYT-----AVHYLYPVKRNDK 130

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   VA+   ++     ++L+    
Sbjct: 131 GVTTNNIVEKLSDGGPQQ-----------APVFSPDGNLVAFVRDNN-----IFLVKLLY 174

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +  ++                          A  F+++          +  +  Y+  
Sbjct: 175 GNSESQVTEDGKLNSVLNGIPDWVYEEEFGFNRALEFNADNTMLAYVRFDESEVPSYTFP 234

Query: 289 LQSNATER---LTNTLF----------------------------------INISA---- 307
           L +    R   L +                                     I+       
Sbjct: 235 LFAGEAPRNNALQDYPGEYTYKYPKAGYPNSKVSVHTFDIKSKVTRQVKLPIDADGYIPR 294

Query: 308 -SYSPDSSQIV-FESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDP------VWSPQG 358
             ++ D +++     +R + +  +Y      +  K   +D+   Y +        + P  
Sbjct: 295 IRFTQDPNKLAIMTLNRHQNRFDMYFADPRSTVCKLALRDESPYYINENVFDNIRFYPDN 354

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTG 415
              +F         +     +G+  + +    N +  +   W+P      ++  ++    
Sbjct: 355 --FSFVSDKSGYPHLYWYSMNGNLIKQVT-SGNYEVKSFIGWNPDTNEFYYTSNEESPMR 411

Query: 416 SKLYSIDLNGRNETL-----INTPAYASDPQWVGFMD 447
             +Y ID  G+   L      N+P ++S  +   FM+
Sbjct: 412 QAVYKIDRKGKKVKLSNQQGTNSPIFSSSMK--YFMN 446



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 6/129 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + PD+    F SD+ G   LY    NG+  K+++           W+P  +   +T   
Sbjct: 349 RFYPDN--FSFVSDKSGYPHLYWYSMNGNLIKQVTSGNYEVKSFIGWNPDTNEFYYTSNE 406

Query: 368 GEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNG 425
                  V K D   +++ L       +P +S       F  K        L ++ D  G
Sbjct: 407 ESPMRQAVYKIDRKGKKVKLSNQQGTNSPIFS--SSMKYFMNKFTSLDTPMLITLNDNTG 464

Query: 426 RNETLINTP 434
           +    + T 
Sbjct: 465 KVLKTLVTN 473



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 81/239 (33%), Gaps = 30/239 (12%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y     + G  NS++   +  + S + +     +D DG   R             RF+ +
Sbjct: 253 YTYKYPKAGYPNSKVSVHTFDIKSKVTRQVKLPIDADGYIPRI------------RFTQD 300

Query: 223 QQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP------RFSSNGKRALIS 275
             K+A  T    ++   +Y  D R       + +     +        RF  +       
Sbjct: 301 PNKLAIMTLNRHQNRFDMYFADPRSTVCKLALRDESPYYINENVFDNIRFYPD--NFSFV 358

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREG--KEQLYVMQ 332
             K     +Y   +  N  +++T+  +   S   ++PD+++  + S+ E   ++ +Y + 
Sbjct: 359 SDKSGYPHLYWYSMNGNLIKQVTSGNYEVKSFIGWNPDTNEFYYTSNEESPMRQAVYKID 418

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTKFSGEKFAIGVMKKDGSQERLLVED 389
             G   K      +     P++S         FT        I +    G   + LV +
Sbjct: 419 RKGKKVKL---SNQQGTNSPIFSSSMKYFMNKFTSLD-TPMLITLNDNTGKVLKTLVTN 473


>gi|196039340|ref|ZP_03106646.1| tolB domain protein [Bacillus cereus NVH0597-99]
 gi|196029967|gb|EDX68568.1| tolB domain protein [Bacillus cereus NVH0597-99]
          Length = 410

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 88/248 (35%), Gaps = 51/248 (20%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY   + ++ L +Y +     +
Sbjct: 35  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSYDGEWLAYVKGEKQNTLELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K++  F S +   ++S               +  + V+ ++   E ++  +      +
Sbjct: 86  DGKKVTPFHSEVSNYQWSPTENIIAFIFT--GTLHTFKVEKKNTDFENVSAGVGDY---A 140

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-------------------- 348
           + P+  + +  S+       +     G+    + +D   +                    
Sbjct: 141 WYPNGKKFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHDDFLAL 196

Query: 349 -YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWS 398
                 WSP    I+F       +S +   + +++ DGS+     ++L+     +   W+
Sbjct: 197 VASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK---WA 253

Query: 399 PSGRSLIF 406
           P+   L +
Sbjct: 254 PANNILAY 261



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 10/87 (11%)

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  IAF +       + + K DG +E+ L +   +  P WS  G  L + + +      +
Sbjct: 28  GVKIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSYDGEWLAYVKGEK-QNTLE 80

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           LY +  +G+  T  ++    S+ QW  
Sbjct: 81  LYRLK-DGKKVTPFHS--EVSNYQWSP 104


>gi|158340211|ref|YP_001521381.1| WD-40 repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158310452|gb|ABW32067.1| WD-40 repeat protein [Acaryochloris marina MBIC11017]
          Length = 297

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 79/235 (33%), Gaps = 18/235 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           ++       +     SP+ Q +  A++D      + + +    R    +      +    
Sbjct: 2   HIVSGHLDCVSGISVSPDGQTLFSASWDK----TLKIWELATGRELSILSGHTDFVSDVM 57

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
            S N +  + S   D  + ++   L++      LT         S SPDS  +V  S   
Sbjct: 58  ISPNAQTLV-SASWDMTLKVWE--LETGKVRHTLTGHTDFVNGISISPDSQILVSTS--- 111

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L V +     +         S      SP G  +  +  S +   +  +   G + 
Sbjct: 112 WDGTLKVWELETGKELHTLNGHTFSVHSVSISPDGQTLV-SASSDKTLRVWEL-ATGREL 169

Query: 384 RLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            +L   S+  +    S  G++LI S     D   K++ +   GR   ++N    +
Sbjct: 170 GILKGHSDSVSDVKISSDGQTLISSSS---DNSLKIWEL-ATGRELGILNGHTDS 220



 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 66/195 (33%), Gaps = 10/195 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS     +L V + +     +        +     SP+ Q +  A+ D      + + + 
Sbjct: 108 VSTSWDGTLKVWELETGKELHTLNGHTFSVHSVSISPDGQTLVSASSDK----TLRVWEL 163

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R    +      +   + SS+G+   IS   D ++ I+ +         L       
Sbjct: 164 ATGRELGILKGHSDSVSDVKISSDGQTL-ISSSSDNSLKIWEL-ATGRELGILNGHTDSV 221

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           I  S SP++  +V  S     + L V       ++ +S   E+++     +  G  +   
Sbjct: 222 IGISISPNAQTLVSTSL---DKTLKVWDLQTG-KEVMSFSGESAFSCCEIALDGHTVVAG 277

Query: 365 KFSGEKFAIGVMKKD 379
            F G+ +   +    
Sbjct: 278 DFDGKLYFFSLEDLS 292


>gi|194365861|ref|YP_002028471.1| WD40 domain-containing protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194348665|gb|ACF51788.1| WD40 domain protein beta Propeller [Stenotrophomonas maltophilia
           R551-3]
          Length = 293

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 63/208 (30%), Gaps = 41/208 (19%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-ISVQKDEAM---DIYSVDLQ 290
              RV  +     R    + + +   +    + +GK AL  S  +       DI+     
Sbjct: 18  SPSRVLQIVGPGQRFAPGVASTQYDEIRLTLTPDGKTALWFSRNRPGGPGGYDIWVSRHD 77

Query: 291 SNATERLT----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                  T    NT       ++S +   + F SDR G +        G D  R+S   E
Sbjct: 78  GQRWRPATPVSFNTPGREFDPAFSANGRVVYFCSDRAGGQ-------GGDDLYRVSMGSE 130

Query: 347 ASY----------------FDPVWSPQGDLIAFTKFS---GEKFAIGVMKKDGSQERL-- 385
             +                F P+ SP    + F+           + V        +   
Sbjct: 131 GRFGEPVNLGPAVNSAADEFAPMLSPDAGTLLFSSNRAGGAGGHDLYVAAMVRGVAQPAR 190

Query: 386 -----LVEDSNLQAPTWSPSGRSLIFSR 408
                L   +     T+   GR+++F+R
Sbjct: 191 PLPGDLNTAAQEFDATFLGDGRTVVFAR 218



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 62/180 (34%), Gaps = 24/180 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP---SRDQILFE 216
           D+I  ++T    D  + + F S +   G     + V   DG   R  TP   +     F+
Sbjct: 42  DEIRLTLTP---DGKTALWF-SRNRPGGPGGYDIWVSRHDGQRWRPATPVSFNTPGREFD 97

Query: 217 PRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSN 268
           P FS N + V + +         D+ RV +        P  +G   N  +   AP  S +
Sbjct: 98  PAFSANGRVVYFCSDRAGGQGGDDLYRVSMGSEGRFGEPVNLGPAVNSAADEFAPMLSPD 157

Query: 269 GKRALISVQKDEAM---DIYSVDLQSN---ATERLT---NTLFINISASYSPDSSQIVFE 319
               L S  +       D+Y   +          L    NT      A++  D   +VF 
Sbjct: 158 AGTLLFSSNRAGGAGGHDLYVAAMVRGVAQPARPLPGDLNTAAQEFDATFLGDGRTVVFA 217



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 21/130 (16%)

Query: 311 PDSSQ-IVFESDREGKEQ---LYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
           PD    + F  +R G      ++V + +G        +S +     FDP +S  G ++ F
Sbjct: 50  PDGKTALWFSRNRPGGPGGYDIWVSRHDGQRWRPATPVSFNTPGREFDPAFSANGRVVYF 109

Query: 364 TKFSGEKF---AIGVMKKDGSQER---------LLVEDSNLQAPTWSPSGRSLIFSRKK- 410
                       +  +   GS+ R          +   ++  AP  SP   +L+FS  + 
Sbjct: 110 CSDRAGGQGGDDLYRVSM-GSEGRFGEPVNLGPAVNSAADEFAPMLSPDAGTLLFSSNRA 168

Query: 411 DGDTGSKLYS 420
            G  G  LY 
Sbjct: 169 GGAGGHDLYV 178



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 27/78 (34%), Gaps = 10/78 (12%)

Query: 355 SPQGDLIAFTKFS----GEKFAIGVMKKDGSQERLLV-----EDSNLQAPTWSPSGRSLI 405
           +P G    +   +       + I V + DG + R               P +S +GR + 
Sbjct: 49  TPDGKTALWFSRNRPGGPGGYDIWVSRHDGQRWRPATPVSFNTPGREFDPAFSANGRVVY 108

Query: 406 FSRKK-DGDTGSKLYSID 422
           F   +  G  G  LY + 
Sbjct: 109 FCSDRAGGQGGDDLYRVS 126


>gi|119773738|ref|YP_926478.1| dipeptidyl peptidase IV [Shewanella amazonensis SB2B]
 gi|119766238|gb|ABL98808.1| dipeptidyl-peptidase IV. Serine peptidase. MEROPS family S09B
           [Shewanella amazonensis SB2B]
          Length = 768

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 94/246 (38%), Gaps = 22/246 (8%)

Query: 115 RVIKEGKDRLR---VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
           ++ K+G   ++    EF    V   +      ++ SP   R     I +   + +T  + 
Sbjct: 213 QLTKDGGGAIKNGMAEF----VAQEEMDRMTGYWWSPDEARIAFTRIDESPVELVTRNEI 268

Query: 172 DFNSRILFVSESVVSGIIKNSLC--VMDRDGANIRYLTPSRDQILFEPR--FSPNQQKVA 227
             +   L       +G     +   ++  DG    ++   +++ ++ PR  + PN ++++
Sbjct: 269 YADGIKLTEQRYPYAGKANVEIALGIVSLDGIKTDWVELGKEKDIYLPRVKWLPNSKELS 328

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFR-------SMILAPRFSSNGKRALISVQKDE 280
           +  +   D   + L    +D+  K     +       ++     F  +    L + ++D 
Sbjct: 329 F-QWQSRDQQTLELRKVSVDKPGKSQLLVKETSKAWVNLNNDLHFFKDSGDFLWTSERDG 387

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK---EQLYVMQSNGSD 337
              IY  + +     +LT   +     +Y  + + +V+ S R+ K     LY +   G +
Sbjct: 388 YSHIYLFEAKGKVKRQLTKGDWTVDEIAYVDEKAGLVYFSGRKDKVTERHLYRVSLKGGE 447

Query: 338 QKRISQ 343
            +R+S 
Sbjct: 448 IERLST 453



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 53/189 (28%), Gaps = 54/189 (28%)

Query: 264 RFSSNGKRALI---SVQKDEAMDIYSVDLQSNA-----------------------TERL 297
             S +G +              D++ +D+ S                           + 
Sbjct: 76  ALSPDGSKVTFLKGRADNQHFYDLWEMDVASGKVSLLLDADKLAGGELSDEEKARRERQR 135

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                I +   ++ D   ++  +      QLY       D  R+    +    D   SP+
Sbjct: 136 IYGQGI-MEYFWAKDGEALLIPA----AGQLYYFTPKSGDV-RLLATGDGFATDAKLSPK 189

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQAPTWSP 399
           G+ ++F K       + V + + +    L +D                    +    WSP
Sbjct: 190 GNYVSFIKEQ----NLYVYELENNSLTQLTKDGGGAIKNGMAEFVAQEEMDRMTGYWWSP 245

Query: 400 SGRSLIFSR 408
               + F+R
Sbjct: 246 DEARIAFTR 254



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 48/291 (16%), Positives = 93/291 (31%), Gaps = 87/291 (29%)

Query: 218 RFSPNQQKVAYA--TYDDEDILRVYLMDTRID-----------------------RAPKR 252
             SP+  KV +     D++    ++ MD                           R  +R
Sbjct: 76  ALSPDGSKVTFLKGRADNQHFYDLWEMDVASGKVSLLLDADKLAGGELSDEEKARRERQR 135

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I     M     ++ +G+  LI      A  +Y    +S     L         A  SP 
Sbjct: 136 IYGQGIMEYF--WAKDGEALLI----PAAGQLYYFTPKSGDVRLLATGDGFATDAKLSPK 189

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSP 356
            + + F  +    + LYV +   +   ++++D   +  + +                WSP
Sbjct: 190 GNYVSFIKE----QNLYVYELENNSLTQLTKDGGGAIKNGMAEFVAQEEMDRMTGYWWSP 245

Query: 357 QGDLIAFTKFSGE------------------------------KFAIGVMKKDG--SQER 384
               IAFT+                                  + A+G++  DG  +   
Sbjct: 246 DEARIAFTRIDESPVELVTRNEIYADGIKLTEQRYPYAGKANVEIALGIVSLDGIKTDWV 305

Query: 385 LLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKL--YSIDLNGRNETLI 431
            L ++ ++  P   W P+ + L F  +       +L   S+D  G+++ L+
Sbjct: 306 ELGKEKDIYLPRVKWLPNSKELSFQWQSRDQQTLELRKVSVDKPGKSQLLV 356



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/223 (11%), Positives = 81/223 (36%), Gaps = 43/223 (19%)

Query: 218 RFSPNQQKVAYATYDDEDIL-----RVYLMDTRIDRAPKRIGNFRSMILA---------- 262
            +SP++ ++A+   D+  +       +Y    ++           ++ +A          
Sbjct: 242 WWSPDEARIAFTRIDESPVELVTRNEIYADGIKLTEQRYPYAGKANVEIALGIVSLDGIK 301

Query: 263 --------------PR--FSSNGKRALISVQKDE--AMDIYSVDLQSNATERL----TNT 300
                         PR  +  N K      Q  +   +++  V +      +L    T+ 
Sbjct: 302 TDWVELGKEKDIYLPRVKWLPNSKELSFQWQSRDQQTLELRKVSVDKPGKSQLLVKETSK 361

Query: 301 LFINISA--SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            ++N++    +  DS   ++ S+R+G   +Y+ ++ G  ++++++  + +  +  +  + 
Sbjct: 362 AWVNLNNDLHFFKDSGDFLWTSERDGYSHIYLFEAKGKVKRQLTK-GDWTVDEIAYVDEK 420

Query: 359 DLIAFTKFSGEKF---AIGVMKKDGSQERLLVEDSNLQAPTWS 398
             + +     +K     +  +   G +   L   + +    ++
Sbjct: 421 AGLVYFSGRKDKVTERHLYRVSLKGGEIERLSTAAGMHGTVFA 463


>gi|71895471|ref|NP_001025756.1| acylamino-acid-releasing enzyme [Gallus gallus]
 gi|53133696|emb|CAG32177.1| hypothetical protein RCJMB04_19g24 [Gallus gallus]
          Length = 734

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 65/153 (42%), Gaps = 26/153 (16%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI------LRVY 240
              +++L  +D  G     L+      L+ PR SP++  +AY              LR+Y
Sbjct: 278 NNRRSALFYVDLTGGKCELLSEDT-GALWSPRLSPDRCHIAYLENRVLGPHQQCSRLRMY 336

Query: 241 LMDTRIDRA-----PKRI-GNFRSMILA--PR--FSSNGKRALISVQKDEAMDIYSVDLQ 290
              T+  R      P+++ G F  +  +  PR  ++++ +R ++   +    D++ VD+Q
Sbjct: 337 NWHTKQTRTVLEVVPRQVWGAFPGIYCSALPRLCWAADSRRLVLDTSQRSQQDVFVVDMQ 396

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           + +T  LT           +P  S  V   DR+
Sbjct: 397 TGSTTSLTAD---------APQGSWSVLTIDRD 420



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 89/271 (32%), Gaps = 57/271 (21%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN----GKRAL 273
            +S ++  + Y           +       +AP+   +    +  P+   +    G++ +
Sbjct: 155 AWSHSETHLLYVAEKKRPKAESFFQ----TKAPELDCSADEELECPK-KPDAPIKGEQFV 209

Query: 274 I------SVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESD--- 321
                  ++       +  +D++ ++   L   +  ++S     +SPD + +VF      
Sbjct: 210 YHEDWGETLSTRSVPVLCVLDIEGSSISVL-EGVPKHVSPGQAFWSPDDTGVVFVGRWHE 268

Query: 322 --REG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             R G       +  L+ +   G   + +S+D   + + P  SP    IA+ +       
Sbjct: 269 PFRLGLRHCNNRRSALFYVDLTGGKCELLSEDT-GALWSPRLSPDRCHIAYLENRVLGPH 327

Query: 373 -----IGVMKKDGSQERLLVE----DSNLQAP----------TWSPSGRSLIFSRKKDGD 413
                + +      Q R ++E          P           W+   R L+    +   
Sbjct: 328 QQCSRLRMYNWHTKQTRTVLEVVPRQVWGAFPGIYCSALPRLCWAADSRRLVLDTSQ--R 385

Query: 414 TGSKLYSIDL-NGRNETLINTPAYASDPQWV 443
           +   ++ +D+  G   +L    A A    W 
Sbjct: 386 SQQDVFVVDMQTGSTTSLT---ADAPQGSWS 413


>gi|116748532|ref|YP_845219.1| WD-40 repeat-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116697596|gb|ABK16784.1| WD-40 repeat protein [Syntrophobacter fumaroxidans MPOB]
          Length = 1402

 Score = 55.0 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 80/256 (31%), Gaps = 52/256 (20%)

Query: 211  DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSS 267
            D +++   F P  + +            V        +    +   G++R M      S 
Sbjct: 970  DNVIWTLGFMPGGRMLVAGGSSYLTFPEVNPQTLEKPKGSNALCYTGSYRRM----SLSP 1025

Query: 268  NGKRALISVQK-------------DEAMDIYSVDLQ----SNATER--LTNTLFINISAS 308
            +G+R  +  +                   +  +DL     + + +R  + +    +    
Sbjct: 1026 DGRRLAVVAKDYRRVIEGCRTPASGGVHSVLVMDLDRKTGTGSLDRPWIMDVP--DTEGL 1083

Query: 309  YSPDSSQIVFESDRE--------GKEQLYVMQSNGSDQK-RISQDKEASYFDPVWS---- 355
            +S   ++  +  DR+        GK +L+++   G   + R  Q    S    VW+    
Sbjct: 1084 WSVAWARGKWTGDRDLIASGDYTGKVRLWLLDGAGGPPEDRTPQILPGSRGSRVWALALH 1143

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQER--------LLVEDSNLQAPTWSPSGRSLIFS 407
            P    +A          I  +  DGS             +   ++ A  WSP G  L F 
Sbjct: 1144 PTAPYLALGT-DDGALEIWRLAIDGSGRIDGELLKNPAWIPQGSVWALAWSPDGSMLAF- 1201

Query: 408  RKKDGDTGSKLYSIDL 423
                G     + + DL
Sbjct: 1202 -GNGGGYVGAVSTADL 1216



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 66/202 (32%), Gaps = 38/202 (18%)

Query: 220  SPNQQKVAYATYDDEDIL------------RVYLMDTRIDRAPKRIGNFRSMI------- 260
            SP+ +++A    D   ++             V +MD         +     M        
Sbjct: 1024 SPDGRRLAVVAKDYRRVIEGCRTPASGGVHSVLVMDLDRKTGTGSLDRPWIMDVPDTEGL 1083

Query: 261  LAPRFSSNGKR-----ALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISASYS--- 310
             +  ++  GK       + S      + ++ +D      E  T         S  ++   
Sbjct: 1084 WSVAWAR-GKWTGDRDLIASGDYTGKVRLWLLDGAGGPPEDRTPQILPGSRGSRVWALAL 1142

Query: 311  -PDSSQIVFESDREGKEQLYVMQSNGSDQ------KRISQDKEASYFDPVWSPQGDLIAF 363
             P +  +   +D +G  +++ +  +GS +      K  +   + S +   WSP G ++AF
Sbjct: 1143 HPTAPYLALGTD-DGALEIWRLAIDGSGRIDGELLKNPAWIPQGSVWALAWSPDGSMLAF 1201

Query: 364  TKFSGEKFAIGVMKKDGSQERL 385
                G   A+          R+
Sbjct: 1202 GNGGGYVGAVSTADLAEGSWRV 1223


>gi|330875067|gb|EGH09216.1| hypothetical protein PSYMP_08980 [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 377

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 66/179 (36%), Gaps = 23/179 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FSS+G+   +  +    +  +S++ ++ A  +++    I      +P  ++    +D +
Sbjct: 206 AFSSDGRFLYVVGEMSGTVTAFSINEKTGALTQVSQADGIPARLKLAPGQARDARNNDLK 265

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                 +  ++                    +P G  +  ++ +    ++  +       
Sbjct: 266 DDPTPRIWAAD-----------------IRLAPDGKWLFISERTTSSVSVFKVDPAKGSV 308

Query: 384 RLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             +    VE+   +    SP+GR L+ S +K    GS  Y+I  +G  + +   P+   
Sbjct: 309 TFVENYPVEEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIGASGALKRVSEAPSGKG 365


>gi|325094806|gb|EGC48116.1| chromosome segregation protein [Ajellomyces capsulatus H88]
          Length = 849

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 84/250 (33%), Gaps = 25/250 (10%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   +   F+  +    + K  L     D   +R   P RD  L     S +   VA A+
Sbjct: 62  GIVATNDSFIMGAEDGTVWKYELETGQMDKLLVRCALPVRDLSL-----SKDGDWVAVAS 116

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               D L V +++       K + +    +    F  +G+   +S   D  + IYSVD  
Sbjct: 117 ----DELVVKIVNIHDMTIVKYLRDQSKGVKHVNFDPSGRYIAVSGS-DGIIYIYSVDGP 171

Query: 291 --------SNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
                        RL T+    +  A + PD+    F +    ++   V   + + Q   
Sbjct: 172 QPELVKKIDGIIGRLETDHEATSR-AVWHPDAK--AFAAVEPTRDIAIVSTRDWTKQNVF 228

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                A      WSP G L+A    +G    I + +          +  N+    W P  
Sbjct: 229 PAGHNADITALAWSPNGALLA---SAGADRQILLWETKTQNILRRYDIPNVINLAWHPVD 285

Query: 402 RSLIFSRKKD 411
            +L F+    
Sbjct: 286 NTLSFTTSDG 295


>gi|300783801|ref|YP_003764092.1| hypothetical protein AMED_1880 [Amycolatopsis mediterranei U32]
 gi|299793315|gb|ADJ43690.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
          Length = 317

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 46/139 (33%), Gaps = 11/139 (7%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D   +   F+ +  +             V       D    R    R  +  P  S +GK
Sbjct: 181 DVNYWGITFAADGNRFYATLGSKGKTYLV-----EADYRRYRGKTLRENVECPSLSPDGK 235

Query: 271 RALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           R     +  D    ++ +DL S     L  T  ++  A +  D + +        +  ++
Sbjct: 236 RIAFKKKVGDGGWRLFVLDLASMRETELAETRSVDDQALWQDDRTILY-----GRENAVW 290

Query: 330 VMQSNGSDQKRISQDKEAS 348
            + SNGS   R   D  AS
Sbjct: 291 AVPSNGSGAPRRLIDGAAS 309



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 64/207 (30%), Gaps = 43/207 (20%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--------VDLQSN 292
           ++      A +            R S +GKR   ++         +         ++ + 
Sbjct: 100 VLVLDDHLAVRHTETVPGTPSRARVSPDGKRVDWTLFVTGDSYAQTGFSTRAGLYEVDTG 159

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              +      I     +  D+                                + +Y+  
Sbjct: 160 RLVK-----TIEELPVFVGDNRYFA---------------------------ADVNYWGI 187

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            ++  G+   F    G K    +++ D  + R      N++ P+ SP G+ + F +K  G
Sbjct: 188 TFAADGNR--FYATLGSKGKTYLVEADYRRYRGKTLRENVECPSLSPDGKRIAFKKKV-G 244

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASD 439
           D G +L+ +DL    ET +       D
Sbjct: 245 DGGWRLFVLDLASMRETELAETRSVDD 271


>gi|288916442|ref|ZP_06410820.1| WD-40 repeat protein [Frankia sp. EUN1f]
 gi|288352213|gb|EFC86412.1| WD-40 repeat protein [Frankia sp. EUN1f]
          Length = 529

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 11/148 (7%)

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---QDKEASYFD 351
             LT      +SA +S D   +   S+R+G+  L+ + ++ +  +R++      +A    
Sbjct: 198 RPLTAGGDWALSAVFSADGQLMA-TSNRDGEVALWDV-TDRASPRRLALELTGPQAGVTT 255

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMK---KDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             +SP G  +A   + G  +   V        + + L      + +  +S  GR+L    
Sbjct: 256 VAFSPDGRTLAGGDWQGNVWLWDVTDRRKPTSAGQALTGHTKPVWSVVFSTDGRTLATGS 315

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAY 436
               D   +L+ +  +G           
Sbjct: 316 D---DRTVRLWDLAGSGTPRQTAQLSGD 340



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/245 (15%), Positives = 78/245 (31%), Gaps = 42/245 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A   +     L       +   A + +      + +  FS++G+    +  
Sbjct: 257 AFSPDGRTLAGGDWQGNVWLWDVTDRRKPTSAGQALTGHTKPVWSVVFSTDGRTLA-TGS 315

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDREGKEQLYVMQS 333
            D  + ++  DL  + T R T  L  +     S ++SPD   +         + + +   
Sbjct: 316 DDRTVRLW--DLAGSGTPRQTAQLSGDTTYVTSVAFSPDDRILA---GGGNGDTILLWDV 370

Query: 334 NGSDQKR-----------------------ISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +     R                        + D  A   D         +     +   
Sbjct: 371 SDRHAPRRLPPGPATPTPAYAVAFAPSKPAPTTDGPARTTDGRPPAAASRVLAVGEADGS 430

Query: 371 FAIGVMKKDGSQERLLV-----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             +  +  D ++ RLL        + + +  +SP GR+L        D   +L+ +    
Sbjct: 431 VQLWNLD-DAARPRLLAGPLRGHTNRIWSLAYSPDGRTLA---TGGFDAAIRLWDVSDPA 486

Query: 426 RNETL 430
           R + L
Sbjct: 487 RPKPL 491



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 72/197 (36%), Gaps = 32/197 (16%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-----LTNTLFIN 304
            + +       L+  FS++G+    +  +D  + ++  D+   A+ R     LT      
Sbjct: 197 GRPLTAGGDWALSAVFSADGQLMA-TSNRDGEVALW--DVTDRASPRRLALELTGPQAGV 253

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVW----SPQG 358
            + ++SPD   +       G  Q  V   + +D+++ +   +A   +  PVW    S  G
Sbjct: 254 TTVAFSPDGRTLA-----GGDWQGNVWLWDVTDRRKPTSAGQALTGHTKPVWSVVFSTDG 308

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQ-ERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGD 413
             +A          + +    GS   R       + + + +  +SP  R L       G 
Sbjct: 309 RTLATGSDDRT---VRLWDLAGSGTPRQTAQLSGDTTYVTSVAFSPDDRILA-----GGG 360

Query: 414 TGSKLYSIDLNGRNETL 430
            G  +   D++ R+   
Sbjct: 361 NGDTILLWDVSDRHAPR 377



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 51/162 (31%), Gaps = 10/162 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             +         FS + Q +A +  D E  L          R    +   ++ +    FS
Sbjct: 200 LTAGGDWALSAVFSADGQLMATSNRDGEVALWDVTDRASPRRLALELTGPQAGVTTVAFS 259

Query: 267 SNGKRALISVQKDEAMDIYSVDLQ---SNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +G+           + ++ V  +   ++A + LT       S  +S D   +   SD  
Sbjct: 260 PDGRTLA-GGDWQGNVWLWDVTDRRKPTSAGQALTGHTKPVWSVVFSTDGRTLATGSD-- 316

Query: 324 GKEQLYVMQSNGSDQKRIS---QDKEASYFDPVWSPQGDLIA 362
               + +    GS   R +              +SP   ++A
Sbjct: 317 -DRTVRLWDLAGSGTPRQTAQLSGDTTYVTSVAFSPDDRILA 357



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 50/335 (14%), Positives = 102/335 (30%), Gaps = 73/335 (21%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV-V 185
           E  LWDV DR            AS R++A          +TG +    +           
Sbjct: 227 EVALWDVTDR------------ASPRRLA--------LELTGPQAGVTTVAFSPDGRTLA 266

Query: 186 SGIIKNSLCVMDRD----GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            G  + ++ + D        +         + ++   FS + + +A  + D      V L
Sbjct: 267 GGDWQGNVWLWDVTDRRKPTSAGQALTGHTKPVWSVVFSTDGRTLATGSDDR----TVRL 322

Query: 242 MDTRIDRAPKRIGNFRS---MILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSN-ATER 296
            D      P++          + +  FS + +            D   + D+    A  R
Sbjct: 323 WDLAGSGTPRQTAQLSGDTTYVTSVAFSPDDRILA----GGGNGDTILLWDVSDRHAPRR 378

Query: 297 L-----------------------TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           L                       T+             +S+++   + +G  QL+    
Sbjct: 379 LPPGPATPTPAYAVAFAPSKPAPTTDGPARTTDGRPPAAASRVLAVGEADGSVQLW--NL 436

Query: 334 NGSDQKRISQDKEASYFDPVWS----PQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLL 386
           + + + R+       + + +WS    P G  +A   F        V      +     L 
Sbjct: 437 DDAARPRLLAGPLRGHTNRIWSLAYSPDGRTLATGGFDAAIRLWDVSDPARPKPLSHPLT 496

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +  + +  ++P G +L        D  ++L+S+
Sbjct: 497 GHNGWVLSVRFAPDGHTLA---SAGIDRTTRLWSV 528



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 5/100 (5%)

Query: 192 SLCVMDRDGANIRYL---TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            L  +D D A  R L          ++   +SP+ + +A   +D    L       R   
Sbjct: 432 QLWNLD-DAARPRLLAGPLRGHTNRIWSLAYSPDGRTLATGGFDAAIRLWDVSDPARPKP 490

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
               +      +L+ RF+ +G     S   D    ++SV 
Sbjct: 491 LSHPLTGHNGWVLSVRFAPDGHTLA-SAGIDRTTRLWSVP 529


>gi|189912837|ref|YP_001964392.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167777513|gb|ABZ95814.1| OmpA-family protein [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
          Length = 423

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 43/208 (20%)

Query: 261 LAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNA------TERLTNTLFINISASYSPD 312
             P  + + K      ++      +I+  + +S+          + N+ F + S   S D
Sbjct: 48  FGPTMTPDAKTLYFYSKRSNRGYTEIFKSNRKSDGSWDFPEEVSVLNSPFDDQSPFISRD 107

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-ASYFDPVWS---------------- 355
              ++  S+R+G  ++ +       +  IS+D   +++    WS                
Sbjct: 108 GKTLLLSSNRDGSVEVSLPD----GKVGISRDLYVSNWNGKDWSIPVALPSAINTEEIEE 163

Query: 356 -PQ--GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----------TWSPSGR 402
            P   GD + FT++   K  +  +     +     +   L +P           ++  G+
Sbjct: 164 NPHLLGDTLLFTRYPFGKPNLAKVYYSQFKNNQWTKPKLLPSPINDDYATIAAAFNDDGK 223

Query: 403 SLIFSRKKDGDTGS-KLYSIDLNGRNET 429
            L F+  + G  G   LY   + G   T
Sbjct: 224 ILFFASNRPGGYGGFDLYMAKIEGETFT 251



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 76/233 (32%), Gaps = 38/233 (16%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDED----ILRVYLMDTRIDRAPKRIG--NFRSMILA 262
           + +   F P  +P+ + + + +         I +           P+ +   N      +
Sbjct: 42  NSEFQEFGPTMTPDAKTLYFYSKRSNRGYTEIFKSNRKSDGSWDFPEEVSVLNSPFDDQS 101

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINIS-ASYSPD------- 312
           P  S +GK  L+S  +D ++++   D +   +  L  +N    + S     P        
Sbjct: 102 PFISRDGKTLLLSSNRDGSVEVSLPDGKVGISRDLYVSNWNGKDWSIPVALPSAINTEEI 161

Query: 313 -------SSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--------EASYFDPVWSPQ 357
                     ++F     GK  L  +  +     + ++ K        + +     ++  
Sbjct: 162 EENPHLLGDTLLFTRYPFGKPNLAKVYYSQFKNNQWTKPKLLPSPINDDYATIAAAFNDD 221

Query: 358 GDLIAFTKFSG---EKFAIGVMKKDGSQERLLVEDSNLQAPTWSP-SGRSLIF 406
           G ++ F          F + + K +G          NL +P  SP     ++F
Sbjct: 222 GKILFFASNRPGGYGGFDLYMAKIEGETF---TNIENLGSPINSPEDEAYIVF 271


>gi|147904826|ref|NP_001083198.1| WD repeat-containing protein 1-B [Xenopus laevis]
 gi|82237628|sp|Q6PAX7|WDR1B_XENLA RecName: Full=WD repeat-containing protein 1-B; AltName:
           Full=Actin-interacting protein 1-B; Short=xAIP1-B
 gi|37748601|gb|AAH60007.1| MGC68560 protein [Xenopus laevis]
          Length = 607

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 93/282 (32%), Gaps = 43/282 (15%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   V+++++ D + ++      +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVAKIIAGDPKGNNFLYTNGKSVIIRNIDNPAIADIYTE----HAHQVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           R    G          + R+WD   ++ ++  ++       + IA               
Sbjct: 65  RYAPSGFYIASGDTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-------GANIRYLTP 208
                          G+    I  ++   +       L     D       G   ++   
Sbjct: 125 EKFGSVFLWDTGSSVGEIIGNIKVINSVDIKQTRPYRLVTGSDDNCCAFFEGPPFKFKFT 184

Query: 209 SRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
             D   F    RFSP+  ++A A  D     +++L D +       +G  +     I A 
Sbjct: 185 MSDHSRFVNCVRFSPDGSRLASAGADG----QIFLYDGKTGEKVCSLGGSKAHDGGIYAV 240

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +S +G + L S   D+   I+ V   S  T   T  L  ++
Sbjct: 241 SWSPDGTQLL-SASGDKTAKIWDVAANSAVT---TFNLGSDV 278



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 86/282 (30%), Gaps = 47/282 (16%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           E+G           +        S+ + + D   I  +       +   R++P+   +A 
Sbjct: 16  ERGVAKIIAGDPKGNNFLYTNGKSVIIRNIDNPAIADIYTEHAHQVVVARYAPSGFYIA- 74

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---------- 278
            + D    LR++    +          F   I    ++ + KR  +  +           
Sbjct: 75  -SGDTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFGSVFLW 133

Query: 279 ----------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQ 327
                          I SVD++     RL      N  A +     +  F  SD      
Sbjct: 134 DTGSSVGEIIGNIKVINSVDIKQTRPYRLVTGSDDNCCAFFEGPPFKFKFTMSDHSRFVN 193

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                 +GS   R++               G +  +   +GEK    V    GS+     
Sbjct: 194 CVRFSPDGS---RLASAG----------ADGQIFLYDGKTGEK----VCSLGGSKA---- 232

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            D  + A +WSP G  L+      GD  +K++ +  N    T
Sbjct: 233 HDGGIYAVSWSPDGTQLL---SASGDKTAKIWDVAANSAVTT 271


>gi|300696843|ref|YP_003747504.1| hypothetical protein RCFBP_mp10298 [Ralstonia solanacearum
           CFBP2957]
 gi|299073567|emb|CBJ53087.1| conserved exported protein of unknown function [Ralstonia
           solanacearum CFBP2957]
          Length = 520

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 89/270 (32%), Gaps = 23/270 (8%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYA 229
              +  L     V  G   + L + D     +  ++ S   I       FSP+ + +A+ 
Sbjct: 86  AGLTGKLAYHSYVSYGDGTSQLFIYDFAARTLTQVSKSAWGIQDPMNAVFSPDGKWLAFM 145

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + +   V+L        P  + N         P+FS++GK        D      S 
Sbjct: 146 GITN-NAWNVFLWQVGSTSQPINMTNSTGQTRNEDPKFSADGKSLFFKQSGDVMQATLSY 204

Query: 288 DLQS---NATERLTNT-LFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +   +TNT   I  S    +PD+S + F +       LY        +    
Sbjct: 205 TSTGPIFTSVVDITNTAPAIENSMPFATPDASAVYFATGTGAGMGLYKETIATHTKVAFD 264

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDGSQERLLVED--SNLQAPT 396
                  + P+    G  + + ++             +    +  +L + D  SN   P 
Sbjct: 265 TPAGLQTYYPIVRADGT-VFYARWKDATSQADQLYTKINPGDTPNQLSINDCNSNNSDP- 322

Query: 397 WSP-SGR-SLIFSRKKDGDTGSKLYSIDLN 424
            +P +G   + FS    G  G +LY  D++
Sbjct: 323 -APVNGTNYVFFSSTTAG--GYQLYLGDVS 349



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + S  +G  QL++         ++S+         + V+SP G  +AF   +   + + +
Sbjct: 97  YVSYGDGTSQLFIYDFAARTLTQVSKSAWGIQDPMNAVFSPDGKWLAFMGITNNAWNVFL 156

Query: 376 MKKDGS----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +   +            +  + P +S  G+SL F  K+ GD      S    G
Sbjct: 157 WQVGSTSQPINMTNSTGQTRNEDPKFSADGKSLFF--KQSGDVMQATLSYTSTG 208



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/236 (15%), Positives = 73/236 (30%), Gaps = 22/236 (9%)

Query: 225 KVAYATY----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           K+AY +Y    D    L +Y    R      +        +   FS +GK        + 
Sbjct: 91  KLAYHSYVSYGDGTSQLFIYDFAARTLTQVSKSAWGIQDPMNAVFSPDGKWLAFMGITNN 150

Query: 281 AMDIYSVDL-QSNATERLTNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           A +++   +  ++    +TN+     N    +S D   + F   + G      +    + 
Sbjct: 151 AWNVFLWQVGSTSQPINMTNSTGQTRNEDPKFSADGKSLFF--KQSGDVMQATLSYTSTG 208

Query: 338 Q-----KRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIG--VMKKDGSQERLLVED 389
                   I+    A     P  +P    + F   +G    +    +             
Sbjct: 209 PIFTSVVDITNTAPAIENSMPFATPDASAVYFATGTGAGMGLYKETIATHTKVAFDTPAG 268

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINT---PAYASDPQ 441
                P     G  + ++R KD  + + +LY+    G     ++     +  SDP 
Sbjct: 269 LQTYYPIVRADGT-VFYARWKDATSQADQLYTKINPGDTPNQLSINDCNSNNSDPA 323



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/88 (10%), Positives = 27/88 (30%), Gaps = 6/88 (6%)

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +  +      + +          + + +    +     +SP G+ L F    +      L
Sbjct: 97  YVSYGDGTSQLFIYDFAARTLTQVSKSAWGIQDPMNAVFSPDGKWLAFMGITNNAWNVFL 156

Query: 419 YSIDLNGRNETLINTPAYAS--DPQWVG 444
           + +    +   + N+       DP++  
Sbjct: 157 WQVGSTSQPINMTNSTGQTRNEDPKFSA 184


>gi|119491193|ref|ZP_01623290.1| hypothetical protein L8106_25295 [Lyngbya sp. PCC 8106]
 gi|119453534|gb|EAW34695.1| hypothetical protein L8106_25295 [Lyngbya sp. PCC 8106]
          Length = 360

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 72/227 (31%), Gaps = 21/227 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           ++SP     A +         + L   +      +    +S+     FS +G+    +  
Sbjct: 33  KWSPEGLLAASSA-----CGEIILWHQKEQVFVLQSETEKSID-CLSFSRDGQYLA-AGG 85

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D  + I+ +  Q+     L  T       ++S  ++Q+ F   R     + +  +    
Sbjct: 86  QDGVVKIWHLPTQT--LTPLDPTSAWVDQLAWSSTTNQLAFSRGRT----VQIWDAETHR 139

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +       ++S     W P  D +A   + G    I           +L   S  QA  W
Sbjct: 140 EVTQLNFHDSSVLCLAWHPVLDTLAVGGYQG--VKIWQGSNWEDDPHVLQIPSASQAVAW 197

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAYASDPQWV 443
           SP G+ +       G+    L  +   N     +   P       W 
Sbjct: 198 SPDGKYIAC-----GNLDRTLAVVEWGNPHPWVMRGFPGKVRSLAWS 239



 Score = 43.5 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 31/247 (12%), Positives = 72/247 (29%), Gaps = 30/247 (12%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            ++ + D +           D  +    + P    +A           V +         
Sbjct: 128 RTVQIWDAETHREVTQLNFHDSSVLCLAWHPVLDTLA-----VGGYQGVKIWQGSNWEDD 182

Query: 251 KRIGNFRSMILAPRFSSNGKRAL-------ISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
             +    S   A  +S +GK          ++V +      + +         L      
Sbjct: 183 PHVLQIPSASQAVAWSPDGKYIACGNLDRTLAVVEWGNPHPWVMRGFPGKVRSL----AW 238

Query: 304 NISASYSPDSSQIVFESDREGKEQLY--VMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           + S +     + ++  +  EG   ++   +Q     +  + +    +     + P   L+
Sbjct: 239 SDSPTVL--GAPLLAVASAEGV-VIWEKQIQEEAGWEGWVLEGHRENVTGIEFQPGTFLL 295

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTG-SKLY 419
           A     G   A+ +        + L +  +  +  +W P G  L       G  G   ++
Sbjct: 296 ASGSEEG---AVCLWHSAEKIIQTLEDGVDGFSCLSWHPRGEFLA----AGGRRGELIIW 348

Query: 420 SIDLNGR 426
           S   +GR
Sbjct: 349 SKSTSGR 355


>gi|47214090|emb|CAF95347.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 600

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 10/123 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +F PN   +A  + D      V L  T+   + +     R  +L+  FS NGK    S  
Sbjct: 444 KFHPNSNYLATGSTDK----TVRLWSTQQGASVRLFTGHRGPVLSLAFSPNGKYLA-SAG 498

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNG 335
           +D+ + ++  DL S    + L        S S+SPDSS +   S  +   +++ +  S+G
Sbjct: 499 EDQRVKLW--DLASGTLFKDLRGHTDSVTSLSFSPDSSLVA-SSSMDNSVRVWDIWNSHG 555

Query: 336 SDQ 338
              
Sbjct: 556 GTS 558



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 24/236 (10%), Positives = 63/236 (26%), Gaps = 22/236 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +F   F  +   +   + D      +   D                +     
Sbjct: 348 TMRGHSGPVFRTAFLTDSSGLLSCSEDT----TIRYWDLGSFTNTVLYQGHTYPVWDVDV 403

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    +++         R+      ++    + P+S+ +   S   
Sbjct: 404 SP--CSLYFASASHDRTARLWTFSR--TYPLRIYAGHLSDVDCVKFHPNSNYLATGST-- 457

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +      R+            +SP G  +A    +GE   + +        
Sbjct: 458 -DKTVRLWSTQQGASVRLFTGHRGPVLSLAFSPNGKYLA---SAGEDQRVKLWDLASGTL 513

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS----IDLNGRNETLINT 433
              L     ++ + ++SP    +  S   +      +++       +G +  L+  
Sbjct: 514 FKDLRGHTDSVTSLSFSPDSSLVASSSMDNSVRVWDIWNSHGGTSADGSSSELVGM 569



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 7/108 (6%)

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           S  + +G    ++ +   + GA++R  T  R  +L    FSPN + +A A  D     RV
Sbjct: 449 SNYLATGSTDKTVRLWSTQQGASVRLFTGHRGPVLSL-AFSPNGKYLASAGEDQ----RV 503

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            L D       K +      + +  FS +    + S   D ++ ++ +
Sbjct: 504 KLWDLASGTLFKDLRGHTDSVTSLSFSPD-SSLVASSSMDNSVRVWDI 550


>gi|311897106|dbj|BAJ29514.1| hypothetical protein KSE_37120 [Kitasatospora setae KM-6054]
          Length = 377

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 79/235 (33%), Gaps = 28/235 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---- 273
            +SP+ +  A+                R+  A    G   S      FS     A     
Sbjct: 141 AWSPDGKHAAFVDGAGNLQTADPDGGNRVLVARAPSGVTWSHPTWQVFSPTPDEAAKYLK 200

Query: 274 ------ISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                  +      + + ++         +L    F + +A   P +  +         +
Sbjct: 201 PKNNLQFTADDHGTLRLLTIPAAGGTNPTQLVLNPFSDENAKPLPQTGNLWPNVGGRYAK 260

Query: 327 QLYVMQSNGSDQKR---ISQDKEASYFD--PVWSPQGDLIAFTKFSGEKFAIGVMKKDG- 380
            +Y  +++G    R   + Q+  A+     P  S  GDL+ F +       +   K  G 
Sbjct: 261 SVYANRNDGQVYIRDEYLQQNGAAATRGSQPDLSNDGDLV-FVRVVDGHDHLFT-KTGGY 318

Query: 381 -SQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +ER L  ++ +    P +SP G+++ F R  DG      Y+I   G   T ++
Sbjct: 319 DGEERDLTPNATVHYTEPAFSPDGKTIAF-RGPDGT-----YTIPTKGGTPTKVS 367



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 70/228 (30%), Gaps = 43/228 (18%)

Query: 193 LCVMDRDGANIRYLTPSRDQILF-EPRF---SPNQQKVA----------YATYDDEDILR 238
           L   D DG N   +  +   + +  P +   SP   + A          +   D   +  
Sbjct: 158 LQTADPDGGNRVLVARAPSGVTWSHPTWQVFSPTPDEAAKYLKPKNNLQFTADDHGTLRL 217

Query: 239 VYLMDTRIDRAPKRIGNFRSM----------ILAPRFSSNGKRA--LISVQKDEAMDIY- 285
           + +         + + N  S            L P     G+ A  + + + D  + I  
Sbjct: 218 LTIPAAGGTNPTQLVLNPFSDENAKPLPQTGNLWPNV--GGRYAKSVYANRNDGQVYIRD 275

Query: 286 -SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQ 343
             +     A  R             S D   +VF    +G + L+        +++ ++ 
Sbjct: 276 EYLQQNGAAATR-------GSQPDLSNDGD-LVFVRVVDGHDHLFTKTGGYDGEERDLTP 327

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           +    Y +P +SP G  IAF    G       +   G     + + + 
Sbjct: 328 NATVHYTEPAFSPDGKTIAFRGPDGT----YTIPTKGGTPTKVSDTTG 371


>gi|294011871|ref|YP_003545331.1| putative dipeptidyl aminopeptidase [Sphingobium japonicum UT26S]
 gi|292675201|dbj|BAI96719.1| putative dipeptidyl aminopeptidase [Sphingobium japonicum UT26S]
          Length = 575

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 4/92 (4%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSN--LQAPTWSPSG 401
              S      SP G  I++         I V    D +  R L  ++   +++  W+P  
Sbjct: 37  GNPSKVQARLSPDGKWISWIAPRDGVLNIWVAPFGDPTSGRALTAETARPIRSYFWAPDS 96

Query: 402 RSLIFSRKKDGDTGSKLYSID-LNGRNETLIN 432
             ++F   K GD    LYS+D + G+   L  
Sbjct: 97  SQILFLNDKGGDENFLLYSVDPVTGQQRPLTP 128



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 7/130 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFINI-SASYSPDSSQIVFESD 321
           R S +GK       +D  ++I+        +   LT      I S  ++PDSSQI+F +D
Sbjct: 45  RLSPDGKWISWIAPRDGVLNIWVAPFGDPTSGRALTAETARPIRSYFWAPDSSQILFLND 104

Query: 322 REGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIA-FTKFSGEKFAIGVM 376
           + G E   LY +      Q+ ++  ++        S    G ++            +  +
Sbjct: 105 KGGDENFLLYSVDPVTGQQRPLTPFEKTRVEVVATSDHVTGRILVGLNNRDPRWHDVHSL 164

Query: 377 KKDGSQERLL 386
                Q  LL
Sbjct: 165 DLKSGQLTLL 174



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 3/86 (3%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           + A  SPD   I + + R+G   ++V    + +  + ++ +         W+P    I F
Sbjct: 42  VQARLSPDGKWISWIAPRDGVLNIWVAPFGDPTSGRALTAETARPIRSYFWAPDSSQILF 101

Query: 364 TKFSGE--KFAIGVMKKDGSQERLLV 387
               G    F +  +     Q+R L 
Sbjct: 102 LNDKGGDENFLLYSVDPVTGQQRPLT 127


>gi|302928428|ref|XP_003054703.1| hypothetical protein NECHADRAFT_3141 [Nectria haematococca mpVI
           77-13-4]
 gi|256735644|gb|EEU48990.1| hypothetical protein NECHADRAFT_3141 [Nectria haematococca mpVI
           77-13-4]
          Length = 365

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/257 (19%), Positives = 94/257 (36%), Gaps = 44/257 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS +   +A    +      VYL D +      ++   +  + +  FSS+G+  + S  
Sbjct: 121 SFSSDGHCLATGAENM-----VYLWDIKSGTILAQLEGHKKEVNSIEFSSDGRSIV-SGA 174

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGS 336
            D+ + ++  D+ + A  R+ +     +S ++SPD   I   S DR     + V +++  
Sbjct: 175 VDKTVRLW--DVDTRANARILSAEASILSVTFSPDMQLIASGSADRS----IRVWEASTG 228

Query: 337 DQKRISQDKEA---SYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQ------ERL 385
             +      E    + +   +SP G+ +A T      + + +G+  K  S       + L
Sbjct: 229 VLRACLDGPEGHSDAVYSVAFSPDGETLASTSIDNTVKVWHLGMPTKPQSPWEVKCIKTL 288

Query: 386 LVEDSNLQAPTWSPSG---------RSLIFSRKKDGDTGSKL---------YSIDLNGRN 427
               S + +  ++P G         +SL FS  K G     L           +   G  
Sbjct: 289 QGHTSIVYSVAFTPDGNGLLSGSADKSLQFSDSKTGVAQFMLVGHGHTVNSVVVSPRGGI 348

Query: 428 ETLINTPAYASDPQWVG 444
               +T   A    W  
Sbjct: 349 FATSSTDGEAR--VWSY 363



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/200 (19%), Positives = 64/200 (32%), Gaps = 22/200 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FS +   +A  +Y    I  +       +        N    I +  FSS+G      +
Sbjct: 74  TFSHDGMYIATGSYRTARIFDIQTGEQVCVLDHSASHANQSIYISSVSFSSDGH----CL 129

Query: 277 QKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGK--EQLYVMQS 333
                  +Y  D++S     +L        S  +S D   IV      G   + + +   
Sbjct: 130 ATGAENMVYLWDIKSGTILAQLEGHKKEVNSIEFSSDGRSIV-----SGAVDKTVRLWDV 184

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--- 390
           +     RI    EAS     +SP   LIA          I V +      R  ++     
Sbjct: 185 DTRANARILS-AEASILSVTFSPDMQLIASGSADRS---IRVWEASTGVLRACLDGPEGH 240

Query: 391 --NLQAPTWSPSGRSLIFSR 408
              + +  +SP G +L  + 
Sbjct: 241 SDAVYSVAFSPDGETLASTS 260



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 57/155 (36%), Gaps = 17/155 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPS---RDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           SG    S+ V +     +R            ++   FSP+ + +A  + D  + ++V+ +
Sbjct: 213 SGSADRSIRVWEASTGVLRACLDGPEGHSDAVYSVAFSPDGETLASTSID--NTVKVWHL 270

Query: 243 DTRID-------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                       +  K +    S++ +  F+ +G   L S   D+++     D ++   +
Sbjct: 271 GMPTKPQSPWEVKCIKTLQGHTSIVYSVAFTPDGNGLL-SGSADKSLQFS--DSKTGVAQ 327

Query: 296 -RLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
             L        S   SP        S  +G+ +++
Sbjct: 328 FMLVGHGHTVNSVVVSPRGGIFA-TSSTDGEARVW 361


>gi|253563692|ref|ZP_04841149.1| dipeptidyl peptidase IV [Bacteroides sp. 3_2_5]
 gi|251947468|gb|EES87750.1| dipeptidyl peptidase IV [Bacteroides sp. 3_2_5]
          Length = 736

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 56/455 (12%), Positives = 135/455 (29%), Gaps = 113/455 (24%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  FN        + I     +P  + +    A+     +      + + V   
Sbjct: 26  DLKEINSGKFNP-------ENIYGVVPMPDGEHYTQRNAEGTQIVKYSFRTGEPVEV--- 75

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             L+  +    
Sbjct: 76  VFDVTKARECPFKKFDSYQFSPDGSKILIATETKPIYRHSYT-----AVHYLYPVKRNDK 130

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   VA+   ++     ++L+    
Sbjct: 131 GVTTNNIVEKLSDGGPQQ-----------APVFSPDGNLVAFVRDNN-----IFLVKLLY 174

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALI-------------- 274
             +  ++                          A  F+++                    
Sbjct: 175 GNSESQVTEDGKLNSVLNGIPDWVYEEEFGFNRALEFNADNTMLAYVRFDESEVPSYTFP 234

Query: 275 -------------------------SVQKDEAMDIYSVDLQSNATERL---TNTLFINIS 306
                                    +   +  + +++ D++S  T ++    +       
Sbjct: 235 LFAGEAPRYDALQDYPGEYTYKYPKAGYPNSKVSVHTFDIKSKVTRQVKLPIDADGYIPR 294

Query: 307 ASYSPDSSQIV-FESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDP------VWSPQG 358
             ++ D +++     +R + +  +Y      +  K   +D+   Y +        + P  
Sbjct: 295 IRFTQDPNKLAIMTLNRHQNRFDMYFADPRSTVCKLALRDESPYYINENVFDNIQFYP-- 352

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGS 416
           +  +F         +     +G+  + +   +        W+P      ++  ++     
Sbjct: 353 EYFSFVSDKSGYPHLYWYSMNGNLIKQVTSGNYEVKNFIGWNPDTNEFYYTSNEESPMRQ 412

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWV----GFMD 447
            +Y ID  G+   L N P   S P +      FM+
Sbjct: 413 AVYKIDRKGKKMKLSNQPGTNS-PIFSSSMKYFMN 446



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SD+ G   LY    NG+  K+++           W+P  +   +T          V K
Sbjct: 357 FVSDKSGYPHLYWYSMNGNLIKQVTSGNYEVKNFIGWNPDTNEFYYTSNEESPMRQAVYK 416

Query: 378 KDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTP 434
            D   +++ L       +P +S       F  K        L ++ D  G+    + T 
Sbjct: 417 IDRKGKKMKLSNQPGTNSPIFS--SSMKYFMNKFTSLDTPILITLNDNTGKVLKTLVTN 473



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 84/245 (34%), Gaps = 42/245 (17%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y     + G  NS++   +  + S + +     +D DG   R             RF+ +
Sbjct: 253 YTYKYPKAGYPNSKVSVHTFDIKSKVTRQVKLPIDADGYIPRI------------RFTQD 300

Query: 223 QQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGN----------FRSMILAPR-FSSNGK 270
             K+A  T    ++   +Y  D R       + +          F ++   P  FS    
Sbjct: 301 PNKLAIMTLNRHQNRFDMYFADPRSTVCKLALRDESPYYINENVFDNIQFYPEYFS---- 356

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--YSPDSSQIVFESDREG--KE 326
                  K     +Y   +  N  +++T+     +     ++PD+++  + S+ E   ++
Sbjct: 357 ---FVSDKSGYPHLYWYSMNGNLIKQVTSGN-YEVKNFIGWNPDTNEFYYTSNEESPMRQ 412

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTKFSGEKFAIGVMKKDGSQER 384
            +Y +   G   K +S     +   P++S         FT        I +    G   +
Sbjct: 413 AVYKIDRKGKKMK-LSNQPGTN--SPIFSSSMKYFMNKFTSLD-TPILITLNDNTGKVLK 468

Query: 385 LLVED 389
            LV +
Sbjct: 469 TLVTN 473


>gi|260841785|ref|XP_002614091.1| hypothetical protein BRAFLDRAFT_67323 [Branchiostoma floridae]
 gi|229299481|gb|EEN70100.1| hypothetical protein BRAFLDRAFT_67323 [Branchiostoma floridae]
          Length = 1344

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/214 (14%), Positives = 60/214 (28%), Gaps = 14/214 (6%)

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
              +   D  ++Y +D    +          +  +P FS + K  L    +D  ++   V 
Sbjct: 993  TIFIGSDDGKMYALDGETGKVKWTFTTEEDLGSSPAFSPD-KSVLYFGTEDGHVNALRV- 1050

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
               +   R      +  S     D +  V+    +    +Y    +G+  K         
Sbjct: 1051 KDGHVVWRYKTGGSVTCSPLVGADGT--VYIGTLD--SVMYAFTPDGA-VKWSRDLGGEI 1105

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIF 406
            +        G L+     +   F    +                   AP  S  GR + F
Sbjct: 1106 WIGLAIGHDGRLVYVGVLAETNFNAFALDTQTGTPAWSFKAAGPIWAAPVLSRDGRYVYF 1165

Query: 407  SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            S +      S +Y++  +  +           D 
Sbjct: 1166 SSR-----DSHIYTLRADSGSLVRKFDVGEDHDG 1194



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 71/232 (30%), Gaps = 18/232 (7%)

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G     +  +D +   +++   + + +   P FSP++  + + T D      V  +  + 
Sbjct: 997  GSDDGKMYALDGETGKVKWTFTTEEDLGSSPAFSPDKSVLYFGTEDG----HVNALRVKD 1052

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                 R     S+  +P   ++G   +     D  M  ++ D     +  L   ++I   
Sbjct: 1053 GHVVWRYKTGGSVTCSPLVGADGT--VYIGTLDSVMYAFTPDGAVKWSRDLGGEIWI--G 1108

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +   D   +      E     + + +         +     +  PV S  G  + F+  
Sbjct: 1109 LAIGHDGRLVYVGVLAETNFNAFALDTQTGTPAWSFKAAGPIWAAPVLSRDGRYVYFSSR 1168

Query: 367  SGEKFAIGVMKKDGSQERLLVE-----DSNLQAPTWSPSGRSLIFSRKKDGD 413
                  I  ++ D        +     D     P  +  G   +F     G 
Sbjct: 1169 DS---HIYTLRADSGSLVRKFDVGEDHDGIDSTPVINKDGT--LFVATVGGS 1215



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 51/149 (34%), Gaps = 9/149 (6%)

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            S ++    +V  G + + +     DGA +++      +I        +  ++ Y     E
Sbjct: 1068 SPLVGADGTVYIGTLDSVMYAFTPDGA-VKWSRDLGGEIWIGLAIGHDG-RLVYVGVLAE 1125

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                 + +DT+             +  AP  S +G+    S +      IY++   S + 
Sbjct: 1126 TNFNAFALDTQTGTPAWSFKAAGPIWAAPVLSRDGRYVYFSSRDS---HIYTLRADSGSL 1182

Query: 295  ERLT----NTLFINISASYSPDSSQIVFE 319
             R      +   I+ +   + D +  V  
Sbjct: 1183 VRKFDVGEDHDGIDSTPVINKDGTLFVAT 1211


>gi|197117546|ref|YP_002137973.1| lipoprotein [Geobacter bemidjiensis Bem]
 gi|197086906|gb|ACH38177.1| lipoprotein, putative [Geobacter bemidjiensis Bem]
          Length = 454

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 58/343 (16%), Positives = 95/343 (27%), Gaps = 99/343 (28%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL----FEPRFSPNQ 223
           G  G    ++  VS S     +   + V +      R +   R+  +    + P FSP+ 
Sbjct: 93  GRSGPEYDKVANVSLSPDGQHVAYGVTVQE---KQRRIVWDGREGDVYVDVWNPVFSPDN 149

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--------- 274
           + +AY     ED   V              GN       P F+++               
Sbjct: 150 RHIAYIAQIGEDSHIVVDGSITGAYPSLLSGN-------PVFAADASHVAFHLTPGAGGK 202

Query: 275 -----------------------SVQKDEAMDIYSVDLQSNA---TERLTNTLFINISAS 308
                                   +  D       V  +         L N   I     
Sbjct: 203 GRLVVASRDLKHLKSWDCVNHEMVLDADRTRAAAVVPAEGKQRAVIVSLLNPEEIKEGPL 262

Query: 309 Y--------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           Y        SPD +   + + +EG+  L     +G ++     + E     PV  P G  
Sbjct: 263 YEEVTGLTLSPDGASFAYVAVKEGRRYLV---LDGKEEPL--PEGEMRQ-PPVVKPGGKG 316

Query: 361 IAFTKFSGEKFAIG------------------VMKKDGSQERLLVEDSNLQA-------- 394
                 +G+ F +                   +  KDGSQ   L                
Sbjct: 317 AGIILTTGKGFRLHPGFGGGKDGRSYQEAAGLIYSKDGSQTAYLARREKSIFAVVNGKES 376

Query: 395 --------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                   P +SP GR L+   +KDG     +  +D +G+   
Sbjct: 377 PGYDMIVTPKFSPDGRFLVCRARKDGRRF--VVVLDRDGKVVR 417



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 56/173 (32%), Gaps = 13/173 (7%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSP 311
                 +L P  SS+  + +++ +   A+ +   + +S       +    +   + S SP
Sbjct: 50  TIPPDAVLTPPGSSDPAKIVVNEEGKGAVYVAYRNGKSVVVHNGRSGPEYDKVANVSLSP 109

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   + +    + K++  V      D            ++PV+SP    IA+    GE  
Sbjct: 110 DGQHVAYGVTVQEKQRRIVWDGREGDV-------YVDVWNPVFSPDNRHIAYIAQIGEDS 162

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            I V          L+       P ++     + F          +L     +
Sbjct: 163 HIVVDGSITGAYPSLLSG----NPVFAADASHVAFHLTPGAGGKGRLVVASRD 211



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 23/189 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+    AY    +    R  ++D + +  P+       M   P     GK A I +   
Sbjct: 272 SPDGASFAYVAVKEGR--RYLVLDGKEEPLPE-----GEMRQPPVVKPGGKGAGIILTTG 324

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +   ++             +      +A   YS D SQ  + + RE  + ++ +  NG +
Sbjct: 325 KGFRLH--PGFGGGK----DGRSYQEAAGLIYSKDGSQTAYLARRE--KSIFAV-VNGKE 375

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                         P +SP G  +        +  + V+ +DG   R       +   T+
Sbjct: 376 SP-----GYDMIVTPKFSPDGRFLVCRARKDGRRFVVVLDRDGKVVREHPRYEMVFDVTF 430

Query: 398 SPSGRSLIF 406
           +P G+S+ +
Sbjct: 431 TPDGKSVAY 439



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/102 (15%), Positives = 35/102 (34%), Gaps = 14/102 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +  + AY    ++ I  V                   MI+ P+FS +G+  +   +K
Sbjct: 350 YSKDGSQTAYLARREKSIFAVVNGKESPGYD---------MIVTPKFSPDGRFLVCRARK 400

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVF 318
           D    +  +D                +    +++PD   + +
Sbjct: 401 DGRRFVVVLDRDGKVVR---EHPRYEMVFDVTFTPDGKSVAY 439



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/279 (15%), Positives = 79/279 (28%), Gaps = 53/279 (18%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A    L       +  P  S +  K+         +   Y     +     R G     +
Sbjct: 43  ATPAVLATIPPDAVLTPPGSSDPAKIVVNEEGKGAVYVAYRNGKSVVVHNGRSGPEYDKV 102

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFE 319
                S +G+     V   E       D +           ++++ +  +SPD+  I + 
Sbjct: 103 ANVSLSPDGQHVAYGVTVQEKQRRIVWDGREGDV-------YVDVWNPVFSPDNRHIAYI 155

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDK-----EASYFDPVWSPQ----GDLIA-------- 362
           +       + V  S       +         +AS+     +P     G L+         
Sbjct: 156 AQIGEDSHIVVDGSITGAYPSLLSGNPVFAADASHVAFHLTPGAGGKGRLVVASRDLKHL 215

Query: 363 ---------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA----PTW--------SPSG 401
                        +    A  V+  +G Q  ++V   N +     P +        SP G
Sbjct: 216 KSWDCVNHEMVLDADRTRAAAVVPAEGKQRAVIVSLLNPEEIKEGPLYEEVTGLTLSPDG 275

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            S  +   K+G      Y + L+G+ E L         P
Sbjct: 276 ASFAYVAVKEGRR----YLV-LDGKEEPLPE--GEMRQP 307


>gi|265764821|ref|ZP_06093096.1| dipeptidyl peptidase IV [Bacteroides sp. 2_1_16]
 gi|263254205|gb|EEZ25639.1| dipeptidyl peptidase IV [Bacteroides sp. 2_1_16]
          Length = 719

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 100/270 (37%), Gaps = 58/270 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDT---------------RIDRAPKRIGNFRS----- 258
           +SP+   +A+   D   + +  L+D                 +     ++G +       
Sbjct: 200 WSPSGNLLAFYRMDQSMVAQYPLVDVTAPIAEVNNIRYPMAGMTSHQVKVGIYNPATGKS 259

Query: 259 ---MILAP--------RFSSNGKRA-LISVQKDEA-MDIYSVDLQSNATERLTNTLFIN- 304
                  P         ++ + K   LI + +D+    +   D+++     LT+TLF   
Sbjct: 260 IYLNAGDPTDRYFTNISWAPDEKSLYLIELNRDQNHAKLCRYDVETGE---LTDTLFEEK 316

Query: 305 ----ISAS----YSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
               +       + P DSS+ +++S ++G   LY+  +NG   +++++         V  
Sbjct: 317 SDKYVEPQDPIIFLPWDSSKFIYQSQKDGFSHLYLYDTNGRQIRQLTEGD--WLVKEVLG 374

Query: 356 PQGDL----IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                    IA T+FS  +  +  +         L     + +   SPSGR LI  +   
Sbjct: 375 FDTKKKEIIIASTEFSPLQNNLFRLDTKTGTRTPLGSAEGVHSGQLSPSGRYLI-DQYNS 433

Query: 412 GDTGSKLYSIDL-NGRNETLINTPAYASDP 440
                 +  ID+ +G++  L+     A+DP
Sbjct: 434 PTVPRSINIIDVQSGKSVNLLT----AADP 459


>gi|28869951|ref|NP_792570.1| hypothetical protein PSPTO_2765 [Pseudomonas syringae pv. tomato
           str. DC3000]
 gi|28853196|gb|AAO56265.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 359

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 66/179 (36%), Gaps = 23/179 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FSS+G+   +  +    +  + ++ ++ A ++++    I      +P  ++    +D +
Sbjct: 188 AFSSDGRFLYVVGEMSGTVTAFLINEKTGALKQVSQADGIPARLKLAPGQARDARNNDLK 247

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                 +  ++                    +P G  +  ++ +    ++  +       
Sbjct: 248 DDPTPRIWAAD-----------------IRLAPDGKWLFISERTTSSVSVFKVDPAKGNV 290

Query: 384 RLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             +    VE+   +    SP+GR L+ S +K    GS  Y+I  +G  + +   P+   
Sbjct: 291 TFVENYPVEEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIGASGALKRVSEAPSGKG 347


>gi|48146783|emb|CAG33614.1| REC14 [Homo sapiens]
          Length = 305

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/284 (17%), Positives = 92/284 (32%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQI  K   + P     +A 
Sbjct: 57  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQI--KSIDAGPVDAWTLA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 114 -FSPDSQYLAT---GTHVGKVNI--FGVESGKKEYSL--------------DTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L       ++ ++ PD +  V  S     + + V   
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LGGHASWVLNVAFCPDDTHFVSSSS---DKNVKVWDV 261

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I +  
Sbjct: 262 GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHIYD 302



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/203 (14%), Positives = 64/203 (31%), Gaps = 13/203 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 113 AFSPDSQYLATGTHVGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 168 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 223

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                    +   +  + P       +  S +   +  +               +    +
Sbjct: 224 LAGTLGGHASWVLNVAFCPDDTHFV-SSSSDKNVKVWDVGTRTCVHTFFDHQDQVWGVKY 282

Query: 398 SPSGRSLIFSRKKDGDTGSKLYS 420
           + +G  ++       D    +Y 
Sbjct: 283 NGNGSKIV---SVGDDQEIHIYD 302


>gi|285808555|gb|ADC36076.1| hypothetical protein [uncultured bacterium 164]
          Length = 332

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 79/264 (29%), Gaps = 34/264 (12%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           ++ T +     S    +  S  S     ++      G  +      RD       FSP+ 
Sbjct: 12  ENTTHQGAIAFSPDGQLVASGRSDNNDVNIWSAANGG--LIRTLNGRDNNANVLAFSPDS 69

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDE 280
           Q +            + L   R+    + +G         R   FS +G+   ++     
Sbjct: 70  QYLV-----SGSPSSLSLNLWRVSDGVRLVGRLPGFTNGVRGLSFSPDGQMLAVNGFHAN 124

Query: 281 AMDIYSVD-----LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              I+ +       +    + +        S  +S D   I   + R     +Y+   + 
Sbjct: 125 TYKIFHIPDMTLIGEFGNFDPVLGYNARIFSIGFSRDGQFIALGATRG----IYLRNVSD 180

Query: 336 SDQKRISQDKEA---SYFDPVWSPQGDLIA---------FTKFSGEKFAIGVMKKDGSQE 383
               RI         + +   ++P G  +A         +         +  +  DG+  
Sbjct: 181 GSLVRIINPNYPDAITTYSIAFAPNGTDVAAGVSNLDPTYGNCIDCSIKLFRI-ADGTLL 239

Query: 384 RLLVEDSNLQAPT--WSPSGRSLI 405
               + S +  P   +SP+GR + 
Sbjct: 240 HTYTDPSGMVFPDVEFSPNGRVIA 263



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 2/73 (2%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               +SP G L+A  +       I      G    L   D+N     +SP  + L+    
Sbjct: 18  GAIAFSPDGQLVASGRSDNNDVNIWSAANGGLIRTLNGRDNNANVLAFSPDSQYLV--SG 75

Query: 410 KDGDTGSKLYSID 422
                   L+ + 
Sbjct: 76  SPSSLSLNLWRVS 88


>gi|255535589|ref|YP_003095960.1| Dipeptidyl peptidase IV [Flavobacteriaceae bacterium 3519-10]
 gi|255341785|gb|ACU07898.1| Dipeptidyl peptidase IV [Flavobacteriaceae bacterium 3519-10]
          Length = 716

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 60/172 (34%), Gaps = 11/172 (6%)

Query: 272 ALISVQKDEAM-DIYSVDLQSNATERL---TNTLFINISASYSP--DSSQIVFESDREGK 325
            LI+  + +   D+  V+ ++    +L   T+  +++         D +  ++ S+R+G 
Sbjct: 281 ILITSARTQNASDVLKVNTKTGNVRKLFTETDEKWVDTDNVTLEFLDDNSFIWGSERDGN 340

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQE 383
             LY    +G  +K+I++          ++P+   +             +  +  +  + 
Sbjct: 341 RHLYWYDQDGKLKKQITKGNWEVTDYYGFNPKTKEVLIQTTEKGSINKVVSKVNINTGKS 400

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTP 434
            LL         ++S  G    F            Y + D NG+    +   
Sbjct: 401 TLLSNSEGNNRASFS--GNYNYFIETSSTAARPFTYILKDGNGKTVKELQNN 450



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 5/62 (8%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           DL+S     L N  F+     +SPD S++ F +D      LY    N     +I+ D + 
Sbjct: 117 DLKSGKVLNLNNGNFVQ-EPGFSPDGSKVAFIAD----NNLYYQDLNSGKITQITTDGKK 171

Query: 348 SY 349
           +Y
Sbjct: 172 NY 173



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 69/242 (28%), Gaps = 67/242 (27%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------ 308
           N  + +  P FS +G +       +    +Y  DL S    ++T     N   +      
Sbjct: 127 NNGNFVQEPGFSPDGSKVAFIADNN----LYYQDLNSGKITQITTDGKKNYILNGLADWV 182

Query: 309 ------------YSPDSSQIVFE-SDREGKEQLYV------------------------- 330
                       ++ +S  IVF  SD     ++Y+                         
Sbjct: 183 YEEEFGHAKLYEWNKNSDAIVFVKSDETEVPEMYIPIYGKQLYPSEMRFKYPKAGEKNSV 242

Query: 331 -----MQSNGSDQKRISQDKEASYFDPVWS----PQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 + +      +      +Y+ P           ++  +  +     +  +     
Sbjct: 243 VSAQLYRLDSGKTTSLDLSAFKNYYIPNVYKTAKADEIILITSARTQNASDVLKVNTKTG 302

Query: 382 QERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             R L  +++ +          +      + +  ++DG+    LY  D +G+ +  I   
Sbjct: 303 NVRKLFTETDEKWVDTDNVTLEFLDDNSFI-WGSERDGNR--HLYWYDQDGKLKKQITKG 359

Query: 435 AY 436
            +
Sbjct: 360 NW 361



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 8/74 (10%)

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +      KF   V      +   L   + +Q P +SP G  + F         + LY  
Sbjct: 104 IYRHSFLGKFD--VKDLKSGKVLNLNNGNFVQEPGFSPDGSKVAFIAD------NNLYYQ 155

Query: 422 DLNGRNETLINTPA 435
           DLN    T I T  
Sbjct: 156 DLNSGKITQITTDG 169


>gi|212534946|ref|XP_002147629.1| catabolite degradation protein, putative [Penicillium marneffei
           ATCC 18224]
 gi|210070028|gb|EEA24118.1| catabolite degradation protein, putative [Penicillium marneffei
           ATCC 18224]
          Length = 814

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 64/177 (36%), Gaps = 9/177 (5%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           ++    + +    FS +G + + +  KD+++ IY V  + +   R        + A++SP
Sbjct: 489 QLTRHSNEVWYVEFSHDGTKLV-TASKDKSVIIYDVTDRFSVIHRFYEHNDAVVFATWSP 547

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D S+I+  S R+   +++             +          W+P G+         +  
Sbjct: 548 DDSKIITCS-RDKTAKVW--DVQTGHCYMTIEHHSDIVTAAAWAPDGETFVTASMDIKAP 604

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                 +  S   +  +    Q    +P G  LI       D   KLY  DL  R E
Sbjct: 605 LCYWGLRSRSPIHVWRDGFRAQDCAITPDGTRLI-----SSDHEDKLYVYDLASRAE 656



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 86/242 (35%), Gaps = 14/242 (5%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               +  V D    +          I+    ++P+ +    A+ D +  L  + + +R  
Sbjct: 556 SRDKTAKVWDVQTGHCYMTIEHHSDIVTAAAWAPDGETFVTASMDIKAPLCYWGLRSRSP 615

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
               R G FR+   A   + +G R +     D    +Y  DL S A E   +      S 
Sbjct: 616 IHVWRDG-FRAQDCA--ITPDGTRLI---SSDHEDKLYVYDLASRAEEYCLSLKNHITSV 669

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S S D S+ V  S R    ++ +M    ++  R    ++   +       G    F    
Sbjct: 670 SVSND-SRYVLLSLR--NNEIQLMDIETTEVVRRFDGQKRGEWVIRSRFGGAGENFVVSG 726

Query: 368 GEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            E   I +  ++      ++E      + A +W+P   S +F+     D   ++++ D  
Sbjct: 727 SEDSQIYIWHRENGALVEVLEGHTKGCVNAISWNPKNPS-MFAS-AGDDYVVRIWTRDNP 784

Query: 425 GR 426
           G 
Sbjct: 785 GE 786



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 73/206 (35%), Gaps = 13/206 (6%)

Query: 185 VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V+     S+ + D  D  ++ +     +  +    +SP+  K+   + D        + D
Sbjct: 510 VTASKDKSVIIYDVTDRFSVIHRFYEHNDAVVFATWSPDDSKIITCSRDK----TAKVWD 565

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            +       I +   ++ A  ++ +G+   ++   D    +    L+S +   +    F 
Sbjct: 566 VQTGHCYMTIEHHSDIVTAAAWAPDGET-FVTASMDIKAPLCYWGLRSRSPIHVWRDGFR 624

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               + +PD ++++  SD E  ++LYV       ++     K         S     +  
Sbjct: 625 AQDCAITPDGTRLI-SSDHE--DKLYVYDLASRAEEYCLSLKNH-ITSVSVSNDSRYVLL 680

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVED 389
           +  +     I +M  + ++     + 
Sbjct: 681 SLRNN---EIQLMDIETTEVVRRFDG 703


>gi|294658601|ref|XP_460940.2| DEHA2F13266p [Debaryomyces hansenii CBS767]
 gi|202953249|emb|CAG89298.2| DEHA2F13266p [Debaryomyces hansenii]
          Length = 378

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 75/219 (34%), Gaps = 35/219 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALIS 275
           FSP++Q +A       + + +Y   +     PK I   +     + +   S +G + L +
Sbjct: 19  FSPDRQILAIT---KSNTVEIYQTSSNSSSKPKLITTLKGHDKTVTSVDISPDGSKIL-T 74

Query: 276 VQKDEAMDIYSVDLQSNATE------RLTNTLFINISASYSPDSSQIVF-ESDREGKEQL 328
             +D    ++  D      +      R++          +SP  ++     SDR      
Sbjct: 75  CSQDRNALVWKYDQAEQEYKPTLVLLRISRAA---TVCRWSPLGNKFAVGSSDRIIAVCY 131

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKD------- 379
           Y  +++    K + +  +++     W P   L+A     G    F+  +   D       
Sbjct: 132 YEPENDWWVSKHLKKPLKSTITSLDWHPNNILLASGSTDGHTRVFSTYIKGLDEKPEPSV 191

Query: 380 -GSQERLLV--------EDSNLQAPTWSPSGRSLIFSRK 409
            GS+               + +   ++ PSG SL F   
Sbjct: 192 WGSKLPFQTLCGDFINETGAWIHDVSFDPSGNSLAFVSH 230



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 69/226 (30%), Gaps = 30/226 (13%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                 D+ +     SP+  K+   + D   ++  Y    +  +    +          R
Sbjct: 51  TTLKGHDKTVTSVDISPDGSKILTCSQDRNALVWKYDQAEQEYKPTLVLLRISRAATVCR 110

Query: 265 FSSNGKR---------ALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPD 312
           +S  G +           +   + E     S  L+      +T+        + AS S D
Sbjct: 111 WSPLGNKFAVGSSDRIIAVCYYEPENDWWVSKHLKKPLKSTITSLDWHPNNILLASGSTD 170

Query: 313 SSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVW------SPQGDLIAF 363
               VF +  +G   K +  V    GS     +   +       W       P G+ +AF
Sbjct: 171 GHTRVFSTYIKGLDEKPEPSVW---GSKLPFQTLCGDFINETGAWIHDVSFDPSGNSLAF 227

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                    +   + +G   R ++       P      +SL+FS +
Sbjct: 228 VSHDSSLTVVY-PEGEGLPPRAILNVKTNYLPF-----KSLVFSSE 267


>gi|12849020|dbj|BAB28173.1| unnamed protein product [Mus musculus]
          Length = 305

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 51/284 (17%), Positives = 93/284 (32%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQ+  K   + P     +A 
Sbjct: 57  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQM--KSIDAGPVDAWTLA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 114 -FSPDSQYLAT---GTHMGKVNI--FGVESGKKEYSL--------------DTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L+      ++ ++ PD +   F S    K  + V   
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTH--FVSSLSDKS-VKVWDV 261

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I V  
Sbjct: 262 GTRTCIHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHVYD 302



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 10/188 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 113 AFSPDSQYLATGTHMGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 168 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 223

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                    +   +  + P       +  S +   +  +               +    +
Sbjct: 224 LAGTLSGHASWVLNVAFCPDDTHFV-SSLSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKY 282

Query: 398 SPSGRSLI 405
           + +G  ++
Sbjct: 283 NGNGSKIV 290


>gi|327537311|gb|EGF24045.1| ATP/GTP-binding protein [Rhodopirellula baltica WH47]
          Length = 451

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 58/159 (36%), Gaps = 21/159 (13%)

Query: 280 EAMDIYSVDLQSNATERLTN-------TLFINIS--ASYSPDSSQIVF-ESDREGKEQLY 329
                           RLT         L  ++       PD SQIVF   D  G  QL+
Sbjct: 291 GTAHSRPAPPAGTVQRRLTRTTDRAYPGLATDVRHWPRSKPDGSQIVFLMRDDNGVVQLW 350

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE- 388
            +  NG   +++S   E+        P GDL+A    +    +I  +  D     ++ E 
Sbjct: 351 SISPNGGSPQQVSFGSESVGSAFSIHPSGDLVACVIGN----SICEVSLDDGSVEIVAEQ 406

Query: 389 -DSNLQAP---TWSPSGRSLIF--SRKKDGDTGSKLYSI 421
            D  +  P    +SP G  + F  + +  G T ++++  
Sbjct: 407 NDRLVCLPFAVVYSPGGNEIAFGGAVEDGGATFNQIFMT 445



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 42/106 (39%), Gaps = 9/106 (8%)

Query: 263 PRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES 320
           PR   +G + +  ++ D   + ++S+     + ++++       SA S  P    +    
Sbjct: 327 PRSKPDGSQIVFLMRDDNGVVQLWSISPNGGSPQQVSFGSESVGSAFSIHPSGDLVACVI 386

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASY---FDPVWSPQGDLIAF 363
                  +  +  +    + +++  +      F  V+SP G+ IAF
Sbjct: 387 ----GNSICEVSLDDGSVEIVAEQNDRLVCLPFAVVYSPGGNEIAF 428


>gi|313672814|ref|YP_004050925.1| wd40 repeat, subgroup [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939570|gb|ADR18762.1| WD40 repeat, subgroup [Calditerrivibrio nitroreducens DSM 19672]
          Length = 1097

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 64/167 (38%), Gaps = 28/167 (16%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           ++       +    FSP+ + +  A+ D      + L D    R      + +S+ LA  
Sbjct: 33  FVQLGHSYGINFISFSPDGKYIVSASDDK----SIRLWDVVTGRELMVFHDTKSVKLA-I 87

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERL-TNTLFINISASYSPDSSQIV----- 317
           FS +  + L S   +  + ++  D+ +        TN+ +   S S+SPD    +     
Sbjct: 88  FSPDNLKIL-SGNDEGNIKLW--DIGTGEMITNFETNSKYPITSLSFSPDGKTFIATQGY 144

Query: 318 --FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             F  D E K+ ++ ++    +  RIS           + P G  IA
Sbjct: 145 YLFCWDVETKKNIWSIK---KELYRIS--------SADFLPDGKSIA 180



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/343 (15%), Positives = 108/343 (31%), Gaps = 66/343 (19%)

Query: 116 VIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           +      +  V        RLWDV   ++++    F    S +      S D  + +   
Sbjct: 45  ISFSPDGKYIVSASDDKSIRLWDVVTGRELM---VFHDTKSVKLAI--FSPDNLKIL--- 96

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                           SG  + ++ + D   G  I     +    +    FSP+ +    
Sbjct: 97  ----------------SGNDEGNIKLWDIGTGEMITNFETNSKYPITSLSFSPDGK---- 136

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-------A 281
            T+       ++  D    +    I      I +  F  +GK   + V  D+       A
Sbjct: 137 -TFIATQGYYLFCWDVETKKNIWSIKKELYRISSADFLPDGKSIALGVNIDKDTLFKLKA 195

Query: 282 MDIYSVDLQSNATER----------LTNTLFIN-ISASYSPDSSQIVFESD-REGKEQLY 329
             I   ++++    +            N       +   S      +   D R    ++Y
Sbjct: 196 SKIEIYEIETKKIIKSIPLIEIKDGYENYSSEEITNIKVSSSGKYALVSIDKRGKNGKVY 255

Query: 330 VMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           ++    S   +I    +KE +Y    +S   D  A     GE   I + +   +  + + 
Sbjct: 256 IVDLQTSSIIKIIPSSNKEINYNILTFSSN-DKFAGLSRLGEILIIDIPEL--TVLKRID 312

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDT------GSKLYSIDLN 424
           + +  Q   +SP  + ++++   + D+         +  IDL 
Sbjct: 313 DKNIWQGVAFSPDNQMIVYATHGNRDSYGEFQENENIELIDLT 355


>gi|302661755|ref|XP_003022541.1| NACHT and WD40 domain protein [Trichophyton verrucosum HKI 0517]
 gi|291186492|gb|EFE41923.1| NACHT and WD40 domain protein [Trichophyton verrucosum HKI 0517]
          Length = 1522

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 76/236 (32%), Gaps = 35/236 (14%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            PS+ +    P FS +   +   +    ++    + DT        I + +    AP    
Sbjct: 807  PSQARHFISPAFSKDGTLITSISGPATEVKSFRVWDTTTGALLNTIEHLKDADFAPS--- 863

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINI--SASYSPDSS-QIVFESDR 322
              ++ ++SV     ++I   D  +    R+  T     +   S S+SPD    IV+ +  
Sbjct: 864  --EKLVVSVNFSNTVEIS--DAVTGTVTRVLETTGHGNSAIHSVSFSPDGKLVIVWAAQ- 918

Query: 323  EGKEQLYVMQSNGSDQKRIS-----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                 + +         +        +   +     +S    LI      G       M 
Sbjct: 919  ---MLVQIWDVESGTMLKTLERCHCPNNFGTPRHLAFSSNNKLIG-ASIMGGHPETWSMT 974

Query: 378  -----KDGSQERLLVEDSNLQAPTWSPSGRSLIF-----SRKKDGDTGSKLYSIDL 423
                 +DGS    L         T+SP  + +       +R  D    S LY+ID 
Sbjct: 975  CIWNAEDGSVVYQL---KGCYTYTFSPDSKLIALIIAGKTRILDLKKRSVLYTIDA 1027



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 51/346 (14%), Positives = 107/346 (30%), Gaps = 62/346 (17%)

Query: 111  LVTGRVIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            L   +   E     ++ FR+          I  K   +     R +      D+   +  
Sbjct: 1039 LALAQAEPEILGATQISFRVAATGKPTGLTIYLKGSSTPDTELRHM------DVDHMVFS 1092

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              G          + + +      L + D     +  L  + + +     FSP+   +A 
Sbjct: 1093 PDG----------KLLATYNWACYLRLWDLASGELVELFKNSNSV----SFSPDGTVMA- 1137

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGN----------------------FRSMILAPRFS 266
             +   ++++R++ M T        I N                      +   I A   S
Sbjct: 1138 -SGSPDNLIRIWDMPTPTPAHFIPILNKAKDSIKRLWSAPAPEEKIASAYGGNIFALVLS 1196

Query: 267  SNGKRALISVQKDEAMDIYSV--DLQSNATERLTN-TLFINISASYSPDSSQIVFESDRE 323
             +GK A       +A     V  D+ S    + +     I  +  + P   ++V  +D  
Sbjct: 1197 PDGKLAASGGCGLDATGAPVVIWDVPSGVPLQQSKLNYSIGKNILFWPSDKRLV-SADAY 1255

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFA--IGVMKKD 379
            G   L  + +   ++  +         +   SP     L+A   +  E       +   +
Sbjct: 1256 GW--LVTLDTTSLEELPMIDKSHRLVLNMAISPNEGMVLVALDTYPPELMHEEYHIYDFN 1313

Query: 380  GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +  L +   +  ++A T+SP  R +     +      K++S D 
Sbjct: 1314 TGKLLLELNGRHAKVEALTFSPDSRLIATGSSR----TVKVWSTDT 1355


>gi|229192567|ref|ZP_04319528.1| TolB domain protein [Bacillus cereus ATCC 10876]
 gi|228590874|gb|EEK48732.1| TolB domain protein [Bacillus cereus ATCC 10876]
          Length = 410

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 82/244 (33%), Gaps = 59/244 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG  I+     + + +  P++S + + +AY     + IL +Y M     +
Sbjct: 35  RHHNLWI-KVDGKEIQIT---KGEYITGPKWSHDGEWLAYVKGKKQSILELYRM-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 + + D++        N  F N+SA 
Sbjct: 86  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLNTFDVEKK------NADFENVSAG 135

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD    +  S+       +     G+    + +D   +               
Sbjct: 136 VGDYAWYPDGKNFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 191

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNL 392
                      WSP    I+F       +S +   + +++ DGS      + LL      
Sbjct: 192 DFLALVASGFKWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNAQWFQ 251

Query: 393 QAPT 396
            AP+
Sbjct: 252 WAPS 255


>gi|153807198|ref|ZP_01959866.1| hypothetical protein BACCAC_01476 [Bacteroides caccae ATCC 43185]
 gi|149130318|gb|EDM21528.1| hypothetical protein BACCAC_01476 [Bacteroides caccae ATCC 43185]
          Length = 785

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 60/156 (38%), Gaps = 16/156 (10%)

Query: 266 SSNGKRALISV--QKDEAMDIYSVDLQSNATERLT---NTLFINISA---SYSPDSSQIV 317
           S +GKR       +     DI  VD+++     +    N  +++      S+  D  +I+
Sbjct: 300 SKDGKRLYFQRYNRTWNQSDICEVDVETGKVRVVIHEENKPYLDYQMRNVSFLNDGKEIL 359

Query: 318 FESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEK------ 370
           F S+R G    Y+  +   + K +++     +         G  + F  +  EK      
Sbjct: 360 FRSERNGWGHYYLYDTATGNLKNQLTDGTWVAGPVAQIDTVGRKMYFYGYGREKGIDPYY 419

Query: 371 FAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLI 405
           + +     D  +  RLL  ++     + SPS R L+
Sbjct: 420 YILYEAHLDRPNALRLLTPENASHEVSISPSCRYLV 455



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 13/95 (13%), Positives = 38/95 (40%), Gaps = 10/95 (10%)

Query: 355 SPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVE-------DSNLQAPTWSPSGRSLI 405
           S  G  + F +++    +  I  +  +  + R+++        D  ++  ++   G+ ++
Sbjct: 300 SKDGKRLYFQRYNRTWNQSDICEVDVETGKVRVVIHEENKPYLDYQMRNVSFLNDGKEIL 359

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           F  +++G     LY     G  +  +    + + P
Sbjct: 360 FRSERNGWGHYYLYDT-ATGNLKNQLTDGTWVAGP 393


>gi|111224523|ref|YP_715317.1| hypothetical protein FRAAL5139 [Frankia alni ACN14a]
 gi|111152055|emb|CAJ63779.1| hypothetical protein; putative WD-40 domains [Frankia alni ACN14a]
          Length = 1376

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 7/133 (5%)

Query: 197  DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
              DG        +          SP+ + VA    D      V L +    R  +     
Sbjct: 1203 HPDGPPGVPAGAAHRGAALACAISPDGRWVASGGRDRG----VRLWEAATLRLRREFTGH 1258

Query: 257  RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
               IL   FS  G   L++   D    ++ VD        LT  +    +A +SPD + +
Sbjct: 1259 TGEILGVAFSPGG-ELLVTAASDHTARVWRVD-DGAPVVTLTGHVHTVRAARFSPDGAWL 1316

Query: 317  VFESDREGKEQLY 329
               +  +G  +++
Sbjct: 1317 A-TAGGDGALRIW 1328



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 80/266 (30%), Gaps = 43/266 (16%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R       + +     +P+ + +A           V L +    R    +      +L 
Sbjct: 705 LRRTFGGHRRWVDGLAVAPDGRMLA----SAGRDGTVRLWEVPDGRGQAVLTGHDGEVLG 760

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVD--LQSNATERLTNTLFINISASYSPDSSQIVFES 320
             F+ +G+    S   D  +  ++V       +    T  L  + S   S   S     +
Sbjct: 761 CAFAPDGRTVA-SAGADGTVRTWAVPRVWDDGSAV-WTGGLPADGS---SAGGS----SA 811

Query: 321 DREGKEQLYV--------------MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           DR   ++L V              +    +   ++ +    S     + P GD++     
Sbjct: 812 DRSSADRLPVGGSWPGGPGEPDPAVPPRRAAPSQVRRGHVGSVTACAFGPDGDVVLSV-- 869

Query: 367 SGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            GE  ++      G+     + V D  L+    +P G  +  +     D   ++      
Sbjct: 870 -GEDGSLRWWDARGAACLLAVTVADVPLRCCVPAPDGGWIAVA---GEDGVIRIVDPSTG 925

Query: 425 GRNETLINTPAY------ASDPQWVG 444
               TL            A D  W+G
Sbjct: 926 APTMTLTGHRGPVLALVVAPDRSWLG 951



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 9/114 (7%)

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + SPD   +     R+   +L+  ++     +R             +SP G+L+  T  S
Sbjct: 1224 AISPDGRWVA-SGGRDRGVRLW--EAATLRLRREFTGHTGEILGVAFSPGGELLV-TAAS 1279

Query: 368  GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                 +  +  DG+    L      ++A  +SP G  L       GD   +++ 
Sbjct: 1280 DHTARVWRVD-DGAPVVTLTGHVHTVRAARFSPDGAWLA---TAGGDGALRIWD 1329



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 45/161 (27%), Gaps = 8/161 (4%)

Query: 128  FRLWDVKDR--KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-V 184
             R WD+          +   +SP       H        +    +G   +  +      V
Sbjct: 1173 LRRWDIASGHPSPTASQVGRASPVGTASTGHPDGPPGVPAGAAHRGAALACAISPDGRWV 1232

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             SG     + + +     +R         +    FSP  + +  A  D        +   
Sbjct: 1233 ASGGRDRGVRLWEAATLRLRREFTGHTGEILGVAFSPGGELLVTAASDH----TARVWRV 1288

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                    +      + A RFS +G     +   D A+ I+
Sbjct: 1289 DDGAPVVTLTGHVHTVRAARFSPDGAWLA-TAGGDGALRIW 1328


>gi|320159136|ref|YP_004191514.1| oligogalacturonate lyase [Vibrio vulnificus MO6-24/O]
 gi|319934448|gb|ADV89311.1| oligogalacturonate lyase [Vibrio vulnificus MO6-24/O]
          Length = 388

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 64/193 (33%), Gaps = 32/193 (16%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG+N+R + + +  +      + P+   +AY +
Sbjct: 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNLRKIKSHAPGESCTHEFWIPDGSAMAYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---------------I 274
           Y      R +Y  +       + +       L   F  +G   +                
Sbjct: 257 YFKGQTERVIYKANPDTLENEEVMVMPPCSHLMSNF--DGSLMVGDGCDAPVDVADASGY 314

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLF-----------INISASYSPDSSQIVFESDRE 323
           S++ D    +Y ++       +L                 +   S++P+   ++F SD E
Sbjct: 315 SIEND--PFLYVLNTNKKTYAKLAKHSSSWKVLDGDRQITHPHPSFTPNDEGVLFTSDFE 372

Query: 324 GKEQLYVMQSNGS 336
           G   +Y+      
Sbjct: 373 GVPAIYIADVPTE 385



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 30/200 (15%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDRE 323
           F+ +G++ L +   D   + Y +DL +    +LT     N    + S D     +  +  
Sbjct: 43  FTQDGQKLLFAGDFDGNRNYYLLDLNTQQAVQLTEGKGDNTFGGFISSDDKSFFYVKNEL 102

Query: 324 GKEQLYVMQSNGSDQKRIS-----QDKEASYFDPV--------------WSPQGDLIAFT 364
               L  +     ++  I           ++                  W P      F 
Sbjct: 103 ---NLMKVDLETLEETVIYTVDEEWKGYGTWVANSECTKLVGIEILKRDWQPLTSWEKFA 159

Query: 365 KFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLY 419
           +F        ++K D   G  E +  E++ L  P + P    ++ F  +   D   ++++
Sbjct: 160 EFYHTNPRCRLIKVDIESGELEVIHQENAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMW 219

Query: 420 SIDLNGRNETLI--NTPAYA 437
            ++ +G N   I  + P  +
Sbjct: 220 LVNEDGSNLRKIKSHAPGES 239



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 91/274 (33%), Gaps = 40/274 (14%)

Query: 196 MDRDGANIRYLTPSRDQIL-----FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           +D D           D I      ++  F+ + QK+ +A  D +     YL+D    +A 
Sbjct: 15  VDSDTQVKVTRLTPTDVICHRNYFYQKCFTQDGQKLLFAG-DFDGNRNYYLLDLNTQQAV 73

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL------------- 297
           +              SS+ K           +++  VDL++     +             
Sbjct: 74  QLTEGKGDNTFGGFISSDDKSFFYVKN---ELNLMKVDLETLEETVIYTVDEEWKGYGTW 130

Query: 298 ------TNTLFINI-SASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEAS 348
                 T  + I I    + P +S   F        +  L  +     + + I Q+  A 
Sbjct: 131 VANSECTKLVGIEILKRDWQPLTSWEKFAEFYHTNPRCRLIKVDIESGELEVIHQE-NAW 189

Query: 349 YFDPVWSP-QGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSG 401
              P++ P     + F            + ++ +DGS  R +   +  ++ T   W P G
Sbjct: 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNLRKIKSHAPGESCTHEFWIPDG 249

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTP 434
            ++ +     G T   +Y  + +   NE ++  P
Sbjct: 250 SAMAYVSYFKGQTERVIYKANPDTLENEEVMVMP 283


>gi|198431299|ref|XP_002131290.1| PREDICTED: similar to Platelet-activating factor acetylhydrolase IB
           subunit alpha (PAF acetylhydrolase 45 kDa subunit)
           (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha)
           (Lissencephaly-1 protein) (LIS-1) [Ciona intestinalis]
          Length = 411

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 97/278 (34%), Gaps = 34/278 (12%)

Query: 165 SITGEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +++G +      I     SVV S    +++ V D +  +           + +  F P  
Sbjct: 104 ALSGHRNPITRVIFHPVYSVVLSAAEDSTIKVWDYETGDFERTLKGHTDAVQDISFDPTG 163

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +A  + D    L V + D       K +      + +  F  +G   + S  +D+ + 
Sbjct: 164 KVLASCSAD----LSVKIWDFVEFECTKTLTGHDHNVSSVSFMPDGDHIV-SASRDKTIK 218

Query: 284 IYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++ +         L +  ++  +  +   D S +   S+    + + V  +  ++ K   
Sbjct: 219 LWELATGYCIKTFLGHKEWVRMVRPNM--DGSLLASCSN---DQTVRVWLTATTECKMEL 273

Query: 343 QDKEASYFDPVWSPQ----------------GDLIA-FTKFSGEKFAIGVMKKDGSQ--E 383
           ++ +       W+P+                G+ +  F         + +      Q   
Sbjct: 274 REHDHVVECLSWAPESAAANICAAAGIEVRKGEKVGPFIVSGSRDKTLKIWDVSTGQCLF 333

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            L+  DS ++A  + P G+ LI +     D   +++ I
Sbjct: 334 TLIGHDSWIRAAMFHPRGKFLITASD---DKTLRVWDI 368


>gi|218905550|ref|YP_002453384.1| tolB domain protein [Bacillus cereus AH820]
 gi|218538944|gb|ACK91342.1| tolB domain protein [Bacillus cereus AH820]
          Length = 410

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 89/248 (35%), Gaps = 51/248 (20%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY   + ++ L +Y +     +
Sbjct: 35  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSYDGEWLAYVKGEKQNTLELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K++  F S +   ++S               +  + V+ ++   E ++  +      +
Sbjct: 86  DGKKVTPFHSEVSNYQWSPTENIIAFIFT--GTLHTFKVEKKNADFENVSAGVGDY---A 140

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-------------------- 348
           + P+  + +  S+       ++    G+    + +D   +                    
Sbjct: 141 WYPNGKKFLVSSEAHLLPTGWI----GAQLYEVQKDAHMNPHKMKHLYALPNEHDDFLAL 196

Query: 349 -YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWS 398
                 WSP    I+F       +S +   + +++ DGS+     ++L+     +   W+
Sbjct: 197 VASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK---WA 253

Query: 399 PSGRSLIF 406
           P+   L +
Sbjct: 254 PANNILAY 261



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 10/87 (11%)

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  IAF +       + + K DG +E+ L +   +  P WS  G  L + + +      +
Sbjct: 28  GVKIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSYDGEWLAYVKGEK-QNTLE 80

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           LY +  +G+  T  ++    S+ QW  
Sbjct: 81  LYRLK-DGKKVTPFHS--EVSNYQWSP 104


>gi|157132089|ref|XP_001662457.1| wd-repeat protein [Aedes aegypti]
 gi|108881742|gb|EAT45967.1| wd-repeat protein [Aedes aegypti]
          Length = 792

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 9/145 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    +  +   D      +     Q +    F PN   +A  + D    L V L    
Sbjct: 554 TGSRDTTARLWSTDREFPLQIYVGHTQDVDTVAFHPNGNYLATGSTD----LTVRLWCVT 609

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ-SNATERLTNTLFIN 304
             +  +   + R  I    FS +GK    + +++    +   DL   +    L +     
Sbjct: 610 SGKLFRIFTDCRQPIHRVCFSPDGKYLAAAGEEN---RVRIFDLAAGSQLTELRDHTSGV 666

Query: 305 ISASYSPDSSQIVFESDREGKEQLY 329
              ++SPDS   V  S  +G  +++
Sbjct: 667 TGITWSPDSRHFV-SSGSDGTIRIW 690



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 73/209 (34%), Gaps = 20/209 (9%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           L   R SP        +   +  +R +       RA  R  N    I +   S  G    
Sbjct: 501 LLFSRHSP-----LLMSVSRDLTMRAWHASDYTCRAVYRGHNHP--IWSVAESPTGLYLA 553

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +  +D    ++S D +      + +T  ++  A + P+ + +      +   +L+ +  
Sbjct: 554 -TGSRDTTARLWSTDREFPLQIYVGHTQDVDTVA-FHPNGNYLA-TGSTDLTVRLWCV-- 608

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVE-DSN 391
                 RI  D         +SP G  +A    +GE+  + +     GSQ   L +  S 
Sbjct: 609 TSGKLFRIFTDCRQPIHRVCFSPDGKYLA---AAGEENRVRIFDLAAGSQLTELRDHTSG 665

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +   TWSP  R  +       D   +++ 
Sbjct: 666 VTGITWSPDSRHFV---SSGSDGTIRIWD 691



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 52/190 (27%), Gaps = 12/190 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++          R +    +  ++    SP    +A  + D        L  T 
Sbjct: 512 SVSRDLTMRAWHASDYTCRAVYRGHNHPIWSVAESPTGLYLATGSRDT----TARLWSTD 567

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFIN 304
            +   +        +    F  NG     +   D  + ++ V   S    R+ T+     
Sbjct: 568 REFPLQIYVGHTQDVDTVAFHPNGNYLA-TGSTDLTVRLWCV--TSGKLFRIFTDCRQPI 624

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               +SPD   +    +     ++ +       Q    +D  +      WSP       +
Sbjct: 625 HRVCFSPDGKYLAAAGEE---NRVRIFDLAAGSQLTELRDHTSGVTGITWSPDSRHFV-S 680

Query: 365 KFSGEKFAIG 374
             S     I 
Sbjct: 681 SGSDGTIRIW 690


>gi|119196215|ref|XP_001248711.1| hypothetical protein CIMG_02482 [Coccidioides immitis RS]
          Length = 1385

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 69/202 (34%), Gaps = 18/202 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S +   +A A+    D L V +++       K + +    +    F  +G+   +S  
Sbjct: 687 AISKDGDWLAVAS----DELAVKIVNIEDMTQVKYLRDQTKGVKHVTFDPSGRYVSVSCS 742

Query: 278 KDEAMDIYS--------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            D  + +YS        +        R+         A + PD +   F +    K+ + 
Sbjct: 743 -DGIIYVYSFTEMEPSLIQKIDGVIRRIETEDEGTSQAVWHPDGT--AFAAVEATKDIVV 799

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   + + QKR S    A      WSP G L+A    +G    I + +          + 
Sbjct: 800 VSSRDWTKQKRFSNGHTADITALAWSPNGALLA---SAGADRQIVLWETRTQSILRKYDF 856

Query: 390 SNLQAPTWSPSGRSLIFSRKKD 411
           +N+    W P    + F+    
Sbjct: 857 ANVINLAWHPVNNEVSFTTSDG 878


>gi|291453533|ref|ZP_06592923.1| protease [Streptomyces albus J1074]
 gi|291356482|gb|EFE83384.1| protease [Streptomyces albus J1074]
          Length = 1143

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 83/259 (32%), Gaps = 33/259 (12%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAP 250
             +  RDG   R +  +       P        VAY T    D  +   YL      R  
Sbjct: 348 YWLTHRDG-PARTIADAPGVRTRLPEMLGAGGTVAYVTDAGGDDAVEIAYLPRATGGRPK 406

Query: 251 KRIGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           +R+   R   +L       G+R  ++        +  +D               +   + 
Sbjct: 407 RRLAGGRLGHVLEIVADPAGERIALASNDG---RLLLLDA---------TDPVGDTVLAP 454

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +P+  +           +  V+    +    + +       D  +SP G  + ++     
Sbjct: 455 APEGERA---------PEAEVVIEEEAPLTELVRSLNGPVRDLAFSPDGHWLTWSHPGIG 505

Query: 370 KF--AIGVMKKDGSQERLL-VEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +    I + +   +  +++ V D   +  +P ++  GR L F   +  D    +++ DL+
Sbjct: 506 RSLRQIRMARVTDADPQIVDVTDGRFEDESPVFTRDGRYLAFLSWRGFDPVYDVHTGDLS 565

Query: 425 ---GRNETLINTPAYASDP 440
              G    L+   +    P
Sbjct: 566 FPLGSRPYLVPLSSATPSP 584



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 43/131 (32%), Gaps = 18/131 (13%)

Query: 270 KRALISVQKDEAMDIYSVDLQS------NATERLTNTLFINISASYSPDSSQIVFESDRE 323
            R     + D    ++  DL            R+T          +SPD SQ+ + S R 
Sbjct: 44  DRLCFVAEDD----LWLADLPGAGQAAPGRAWRMTADRTRLGLPRFSPDGSQVAYTSWRS 99

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD----LIAFTKFSGEKFAI----GV 375
              ++++  + G   +R++           W P G      I      G+ F+       
Sbjct: 100 LDPEIHLTPTGGGPVRRLTYWGNQDTRVRGWYPPGHESVGEIIAVSSHGQPFSYVTWAYS 159

Query: 376 MKKDGSQERLL 386
           +  DGS    L
Sbjct: 160 LLTDGSPGSKL 170



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 66/198 (33%), Gaps = 25/198 (12%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+   R+ +  PRFS +G +   +  +    +I+          RLT     +     + 
Sbjct: 72  RMTADRTRLGLPRFSPDGSQVAYTSWRSLDPEIHLTPTGGGPVRRLTYWGNQDTRVRGWY 131

Query: 311 PDSSQIV---FESDREGKEQLYVMQS-----NGSDQKRISQDKEASYFDPVWSPQGDL-- 360
           P   + V         G+   YV  +     +GS   ++           +    G    
Sbjct: 132 PPGHESVGEIIAVSSHGQPFSYVTWAYSLLTDGSPGSKLPWGPVTDLTVGLV--DGQYRT 189

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--------DSNLQAPTWSPSGRSLIFSRKKDG 412
           +  T     + A     + G+Q RL +         D +L++P     GR + F    +G
Sbjct: 190 LLLTATPPHEPAYWKRYRGGAQGRLWLHGERLLPGLDGHLESPMI-VDGR-IAFLSDHEG 247

Query: 413 DTGSKLYSIDLNGRNETL 430
                LYS   +G +   
Sbjct: 248 --IGNLYSCAPDGTDLRR 263



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/215 (14%), Positives = 61/215 (28%), Gaps = 20/215 (9%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLC----------VMDRDGANIRYLTPSRDQ 212
              +T   GD    I ++      G  K  L           V D  G  I   +     
Sbjct: 380 VAYVTDAGGDDAVEIAYL-PRATGGRPKRRLAGGRLGHVLEIVADPAGERIALASNDGRL 438

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +L +    P    V     + E      ++        + + +    +    FS +G   
Sbjct: 439 LLLDAT-DPVGDTVLAPAPEGERAPEAEVVIEEEAPLTELVRSLNGPVRDLAFSPDGHWL 497

Query: 273 LISVQKDE-AMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQL 328
             S      ++    +   ++A  ++   T+  F + S  ++ D   + F S R      
Sbjct: 498 TWSHPGIGRSLRQIRMARVTDADPQIVDVTDGRFEDESPVFTRDGRYLAFLSWRGFDPVY 557

Query: 329 YV----MQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            V    +      +  +     A+       P G 
Sbjct: 558 DVHTGDLSFPLGSRPYLVPLSSATPSPFALLPDGR 592



 Score = 36.9 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           G   R+  + + L  P +SP G  + ++  +  D   +++     G     + 
Sbjct: 68  GRAWRMTADRTRLGLPRFSPDGSQVAYTSWRSLD--PEIHLTPTGGGPVRRLT 118


>gi|224146578|ref|XP_002326058.1| predicted protein [Populus trichocarpa]
 gi|222862933|gb|EEF00440.1| predicted protein [Populus trichocarpa]
          Length = 345

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 81/263 (30%), Gaps = 25/263 (9%)

Query: 186 SGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG     + +    G      +       + +  ++ +  ++  A+ D      V   D 
Sbjct: 72  SGSHDKEIFLWYMHGECKNFMVMRGHKNAVLDLHWTADGSQIISASPDK----TVRAWDV 127

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  K++    S + +   S  G   ++S   D    ++  DL+     +     +  
Sbjct: 128 ETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTSKLW--DLRQKGAIQTFPDKYQI 185

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + S+S D+S  +F    +    + V      +     +  +        SP G  +  T
Sbjct: 186 TAVSFS-DASDKIFTGGID--NDVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLL-T 241

Query: 365 KFSGEKFAIGVMKKDGSQER--LLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGS 416
                K  I  M+    Q R   + E             +WSP G  +       G    
Sbjct: 242 NGMDNKLCIWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGSKV-----TAGSADR 296

Query: 417 KLYSIDLNGRNETLINTPAYASD 439
            +Y  D   R   L   P +A  
Sbjct: 297 MVYIWDTTSR-RILYKLPGHAGS 318


>gi|170728819|ref|YP_001762845.1| transcriptional regulator, CadC [Shewanella woodyi ATCC 51908]
 gi|169814166|gb|ACA88750.1| transcriptional regulator, CadC [Shewanella woodyi ATCC 51908]
          Length = 711

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 91/236 (38%), Gaps = 31/236 (13%)

Query: 180 VSESVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQI----LFEPRFSPNQQKVAYATYDDE 234
           ++ + +    +  +  +  DG     +L    D I         FSP   ++ ++T    
Sbjct: 344 IALTSIHHDDQRYIETLTPDGQLASSHLIDYPDSIPKFRNISANFSPRDNQLIFST---- 399

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL----- 289
              +++ +  +    P  +     +  +P F  +GKR L +++     DI +V L     
Sbjct: 400 -GKQLFTLSFKGQITPVSLPLVDGI-GSPLFHPDGKRML-AIKGHYDSDIVAVPLSQFTD 456

Query: 290 -----QSNATER--LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                  +      +  + F    A Y P+   I + S R G  Q+++  + GS+ +++S
Sbjct: 457 NPLSLDGSNFRHSVIARSTFGENHAKYQPNGDAIAYTSKRSGSWQMWL--TQGSNTQQLS 514

Query: 343 QDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           Q   +SY +D VW   GD +     S     +  +  +G +  + +     +   W
Sbjct: 515 QFPLSSYIYDFVWGADGDSLLVNVSS----ELKQIDVNGGETSISLAQPLSKLFDW 566



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 73/202 (36%), Gaps = 31/202 (15%)

Query: 265 FSSNGKRALI-SVQKDEAMDIYSVDLQSN-ATERLTNTL-----FINISASYSPDSSQIV 317
           +S +     + S+  D+   I ++      A+  L +       F NISA++SP  +Q++
Sbjct: 337 YSPSQNLIALTSIHHDDQRYIETLTPDGQLASSHLIDYPDSIPKFRNISANFSPRDNQLI 396

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-- 375
           F +     +QL+ +   G     +S         P++ P G  +   K   +   + V  
Sbjct: 397 FST----GKQLFTLSFKG-QITPVSLPLVDGIGSPLFHPDGKRMLAIKGHYDSDIVAVPL 451

Query: 376 -------MKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                  +  DGS  R   +           + P+G ++ ++ K+ G     L      G
Sbjct: 452 SQFTDNPLSLDGSNFRHSVIARSTFGENHAKYQPNGDAIAYTSKRSGSWQMWL----TQG 507

Query: 426 RNETLI---NTPAYASDPQWVG 444
            N   +      +Y  D  W  
Sbjct: 508 SNTQQLSQFPLSSYIYDFVWGA 529



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 12/71 (16%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISAS 308
           + + +  +  LA  +S +G+  +     +      +++ +L +    +LT  L    S +
Sbjct: 175 QPLTSTDNRELASIYSPDGEYVIFMRYPEVLCTSHLWAKNLATQEEFQLTQDLGSYGSLA 234

Query: 309 YSPDSSQIVFE 319
           ++ D S++ F 
Sbjct: 235 FADDGSKLAFV 245



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASY 349
            + + LT+T    +++ YSPD   ++F    E      L+       ++ +++QD   SY
Sbjct: 172 KSMQPLTSTDNRELASIYSPDGEYVIFMRYPEVLCTSHLWAKNLATQEEFQLTQDL-GSY 230

Query: 350 FDPVWSPQGDLIAFTKFS 367
               ++  G  +AF + +
Sbjct: 231 GSLAFADDGSKLAFVEQN 248


>gi|108797834|ref|YP_638031.1| hypothetical protein Mmcs_0859 [Mycobacterium sp. MCS]
 gi|119866928|ref|YP_936880.1| hypothetical protein Mkms_0876 [Mycobacterium sp. KMS]
 gi|108768253|gb|ABG06975.1| hypothetical protein Mmcs_0859 [Mycobacterium sp. MCS]
 gi|119693017|gb|ABL90090.1| conserved hypothetical protein [Mycobacterium sp. KMS]
          Length = 945

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/252 (17%), Positives = 78/252 (30%), Gaps = 40/252 (15%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------ 274
            + Q V    Y +  +  +    +  D  P  +  +    LA   S +G R  +      
Sbjct: 439 NDAQTVYVFDYAERAVYVLDPATSTTDPDPVLVDGYP---LAMALSPDGSRLFVNTMTFA 495

Query: 275 --SVQKDEAMDIYSVDLQSNAT--ERL-----TNTLFINISASYSPDSSQIV---FESDR 322
             S        +  +D  + +   + +     T     N     SPD   +    F S  
Sbjct: 496 DASGSTTSQAGLVVIDTATKSVIGQPILYGSPTEGPATNGVILASPDGRYVYTETFASGS 555

Query: 323 EGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL-----IAFTKFSGEKFAIGV 375
            G     L+ + +     + ++     S   PV SP G       +A      +     V
Sbjct: 556 GGVPTGTLWKIDTVAGTVQAVASGLYPS--APVLSPDGTRLYVPAVAVVDGQPQLAIGAV 613

Query: 376 MKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIF------SRKKDGDTGSKLYSIDLNGRNE 428
              DG+   R+ ++  +  A   SP G  L        + +       +L  ID    N 
Sbjct: 614 STADGTMLTRIPIDTGSPTAVAVSPDGTRLYLGQLLGEAGQDPASLTGQLAVIDTGTSNA 673

Query: 429 TLINTPAYASDP 440
               TP  A +P
Sbjct: 674 ---VTPPRAVNP 682



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 84/261 (32%), Gaps = 38/261 (14%)

Query: 218 RFSPNQQKVAYATYDDED----ILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRA 272
            FSP+ ++V  ++           R+ ++D    + A   +    +       S +G+R 
Sbjct: 333 AFSPDGKRVYVSSMSQGADGQLSGRIDVIDAASGQAAGAPVELVNTAATGLVVSPDGRRL 392

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFI----------NISASYSPDSSQIVFESDR 322
             +   D  +    +DLQ N T   T  + I           +    S + +Q V+  D 
Sbjct: 393 -YTANADSTVT--VIDLQHNNTPVATVPIGIFSGPGSPGGGPLDIVISQNDAQTVYVFDY 449

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVM 376
             +  +YV+    S         +        SP G  +     +            G++
Sbjct: 450 AER-AVYVLDPATSTTDPDPVLVDGYPLAMALSPDGSRLFVNTMTFADASGSTTSQAGLV 508

Query: 377 KKDGSQERLLVEDSNLQAPTW----------SPSGRSLI---FSRKKDGDTGSKLYSIDL 423
             D + + ++ +     +PT           SP GR +    F+    G     L+ ID 
Sbjct: 509 VIDTATKSVIGQPILYGSPTEGPATNGVILASPDGRYVYTETFASGSGGVPTGTLWKIDT 568

Query: 424 NGRNETLINTPAYASDPQWVG 444
                  + +  Y S P    
Sbjct: 569 VAGTVQAVASGLYPSAPVLSP 589



 Score = 40.0 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 29/105 (27%), Gaps = 7/105 (6%)

Query: 220 SPNQQKVAYATY--DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--S 275
           SP+ + V   T+      +    L          +         AP  S +G R  +   
Sbjct: 540 SPDGRYVYTETFASGSGGVPTGTLWKIDTVAGTVQAVASGLYPSAPVLSPDGTRLYVPAV 599

Query: 276 VQKDEAMDIY---SVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              D    +              R+        + + SPD +++ 
Sbjct: 600 AVVDGQPQLAIGAVSTADGTMLTRIPIDTGSPTAVAVSPDGTRLY 644



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/151 (10%), Positives = 44/151 (29%), Gaps = 22/151 (14%)

Query: 252 RIGNFRSMILAPRFSSNGKRALI---SVQKDEA--MDIYSVDLQSNATERLTNTLFINIS 306
           R+    ++      S +G+   +   ++  D           + +     + + L +   
Sbjct: 261 RVSLGDALPHTVVVSPDGRTVYVVTTTISADGGSVPTSTVYGIDTRTNRPVGDPLAVGYV 320

Query: 307 A-----------SYSPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQD-KEASY 349
                       ++SPD  ++   S  +G +     ++ V+ +          +    + 
Sbjct: 321 PQTGFSTTAKPLAFSPDGKRVYVSSMSQGADGQLSGRIDVIDAASGQAAGAPVELVNTAA 380

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              V SP G  +           I +   + 
Sbjct: 381 TGLVVSPDGRRLYTANADSTVTVIDLQHNNT 411


>gi|47566541|ref|ZP_00237363.1| hypothetical protein exported protein [Bacillus cereus G9241]
 gi|47556571|gb|EAL14903.1| hypothetical protein exported protein [Bacillus cereus G9241]
          Length = 412

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 80/244 (32%), Gaps = 59/244 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY     +  L +Y +     +
Sbjct: 35  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSHDGEWLAYVKGKKQGSLELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 +++ D++        NT F N+SA 
Sbjct: 86  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLHTFDVEKK------NTDFENVSAG 135

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD  +    S+       +     G+    + +D   +               
Sbjct: 136 VGDYAWYPDGKKFFVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 191

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNL 392
                      WSP    I+F       +S +   + +++ DGS      + LL      
Sbjct: 192 DFLALVASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK 251

Query: 393 QAPT 396
            AP 
Sbjct: 252 WAPA 255



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAF +       + + K DG +E+ L +   +  P WS  G  L + + K      +LY
Sbjct: 30  KIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSHDGEWLAYVKGKK-QGSLELY 82

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 83  RLK-DGKKVTPFHS--EASNYQWSP 104


>gi|326336322|ref|ZP_08202493.1| dipeptidyl-peptidase IV [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325691496|gb|EGD33464.1| dipeptidyl-peptidase IV [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 722

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/397 (10%), Positives = 126/397 (31%), Gaps = 57/397 (14%)

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ--VLVTGRVIKEGKDRLRVEFR 129
           DL     F+ + ++       N   I R   +     +  +L+        +     +F 
Sbjct: 69  DLYN---FSTLEKEKTLFDTKNFSEIKRVDSYTFNKQEDKLLIATNSEPIFRRSFFADFY 125

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDD-IYQSITGEKGDFNSRILFVSESVVSGI 188
           ++D+K ++                    ++D  I + +   KGD  + +   +  +    
Sbjct: 126 IFDLKKQELT-----------------KLTDKKIQEPLFSPKGDKIAYVFKNNIYIYDTQ 168

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQ-------ILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            K    V   DG   + +  + D        I+    ++ +  ++AY  +D+ ++    +
Sbjct: 169 SKREQQVT-FDGEKNKIINGTSDWVYEEEFAIVRTFDWNADGTQLAYIRFDEHEVPEFSM 227

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                   P                        + +K+  + ++  D++     R+    
Sbjct: 228 DIYGTTLYPTEDTFKYPK---------------AGEKNSVVSLHLYDVKGGKATRIPLDA 272

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +      ++ +++ +  ++    +    ++  + S +K  S   E        +     +
Sbjct: 273 YYIPRLQWTKEANILSVQTLNRHQNDFNIIFVDASTKKYKSVYHEVDKAYVSITDDLTFL 332

Query: 362 -----AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR--SLIFSRKKDGDT 414
                  +        +    K+G   + + +        +  + +   + +   + G  
Sbjct: 333 DDNSFIISSEKDGNNHLYHYDKNGKLIKQITQGKWEVTEYYGYNSKAKQIYYQSTEPGSI 392

Query: 415 GSKLYSIDLNGRNETLI----NTPAYASDPQWVGFMD 447
              +YSI L+G+++  +     T      P +  F++
Sbjct: 393 NRGIYSIALSGKDKKALAIEKGTNNATFSPDFSLFIN 429


>gi|315609087|ref|ZP_07884056.1| OmpA family protein [Prevotella buccae ATCC 33574]
 gi|315249157|gb|EFU29177.1| OmpA family protein [Prevotella buccae ATCC 33574]
          Length = 755

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 13/108 (12%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKD----GSQERL---LVEDS 390
           I++D  +S+  P  SP G  + FT           I  ++      G  E L   +    
Sbjct: 344 ITRDTLSSFAHPAISPDGQWLYFTSDMPGGMGGLDIWRVRITAAGLGGVENLGEPVNTPG 403

Query: 391 NLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNET-LINTPAY 436
           N + PT+ P+G  L FS     G  G  ++    + +     ++ P Y
Sbjct: 404 NEEFPTFRPNGD-LYFSSDGHPGMGGLDIFIASADPQTRRYRLSHPGY 450



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 50/154 (32%), Gaps = 21/154 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID----RAPKRIG---NFRS 258
           +T         P  SP+ Q + + +     +  + +   RI        + +G   N   
Sbjct: 344 ITRDTLSSFAHPAISPDGQWLYFTSDMPGGMGGLDIWRVRITAAGLGGVENLGEPVNTPG 403

Query: 259 MILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATE-RLT------NTLFINISAS 308
               P F  NG     S         +DI+           RL+      N+   +   +
Sbjct: 404 NEEFPTFRPNGD-LYFSSDGHPGMGGLDIFIASADPQTRRYRLSHPGYPLNSEGDDFGMT 462

Query: 309 Y-SPDSSQIVFESD-REGKEQLYVMQSNGSDQKR 340
           +  P +    F S+ R+G+   ++   +  +  +
Sbjct: 463 FEGPHNRGF-FSSNRRDGRGFDHIYSFDNPEIVQ 495



 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 8/60 (13%)

Query: 390 SNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLN----GRNETL---INTPAYASDPQ 441
           S+   P  SP G+ L F+     G  G  ++ + +     G  E L   +NTP     P 
Sbjct: 350 SSFAHPAISPDGQWLYFTSDMPGGMGGLDIWRVRITAAGLGGVENLGEPVNTPGNEEFPT 409


>gi|313159082|gb|EFR58457.1| peptidase, S9A/B/C family, catalytic domain protein [Alistipes sp.
           HGB5]
          Length = 643

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 35/86 (40%), Gaps = 3/86 (3%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSP 399
           +  + +       SP G   ++      +  I V   DG Q   +    + +L    W+ 
Sbjct: 29  TFFRNSEKTGYQISPDGRYFSYMAPYESRRNIFVQPVDGKQAVRITSETERDLAGYFWAG 88

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNG 425
             R +++ +   GD   +LY ++++G
Sbjct: 89  DNR-ILYLKDTGGDENYQLYGVNIDG 113



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD     + +  E +  ++V   +G    RI+ + E       W+   + I + K +G 
Sbjct: 42  SPDGRYFSYMAPYESRRNIFVQPVDGKQAVRITSETERDLAGYFWAGD-NRILYLKDTGG 100

Query: 370 --KFAIGVMKKDGSQERLLVE 388
              + +  +  DGS  +    
Sbjct: 101 DENYQLYGVNIDGSDPKAYTA 121



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 48/132 (36%), Gaps = 5/132 (3%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG- 324
           S +G+        +   +I+   +      R+T+    +++  +    ++I++  D  G 
Sbjct: 42  SPDGRYFSYMAPYESRRNIFVQPVDGKQAVRITSETERDLAGYFWAGDNRILYLKDTGGD 101

Query: 325 -KEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDG 380
              QLY +  +GSD K  +          DP+      +I  T       F    +  + 
Sbjct: 102 ENYQLYGVNIDGSDPKAYTAIPGVRTQIIDPLEEIDSLIIIGTNQRNPMIFDPYRLNLNT 161

Query: 381 SQERLLVEDSNL 392
            +  +L E+   
Sbjct: 162 GEMTMLCENPGD 173


>gi|79520288|ref|NP_197897.3| TAF5 (TBP-ASSOCIATED FACTOR 5); nucleotide binding / transcription
           regulator [Arabidopsis thaliana]
 gi|39545918|gb|AAR28022.1| TAF5 [Arabidopsis thaliana]
 gi|332006023|gb|AED93406.1| transcription initiation factor TFIID subunit D4 [Arabidopsis
           thaliana]
          Length = 669

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 63/204 (30%), Gaps = 16/204 (7%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +  +G     L       ++   FSP    V  ++ D      + L  T+++        
Sbjct: 403 IGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADT----TIRLWSTKLNANLVCYKG 458

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSS 314
               +   +FS  G     S   D    I+S+D       R+      ++    + P+ +
Sbjct: 459 HNYPVWDAQFSPFGHYFA-SCSHDRTARIWSMDRI--QPLRIMAGHLSDVDCVQWHPNCN 515

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            I   S     + + +      +  RI     +       SP G  +A     G      
Sbjct: 516 YIATGSS---DKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGT----- 567

Query: 375 VMKKDGSQERLLVEDSNLQAPTWS 398
           +M  D S  R +       +  WS
Sbjct: 568 IMMWDLSTARCITPLMGHNSCVWS 591



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 72/225 (32%), Gaps = 42/225 (18%)

Query: 128 FRLWDVKDRKQII---GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            RLW  K    ++   G  +    A +    H  +                         
Sbjct: 442 IRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFAS------------------------ 477

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S      +  MDR    +R +      +    ++ PN   +A  + D      V L D 
Sbjct: 478 CSHDRTARIWSMDRI-QPLRIMAGHLSDVDCV-QWHPNCNYIATGSSDK----TVRLWDV 531

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFI 303
           +     +     RSM+L+   S +G+    S  +D  + ++  DL +      L      
Sbjct: 532 QTGECVRIFIGHRSMVLSLAMSPDGRYMA-SGDEDGTIMMW--DLSTARCITPLMGHNSC 588

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             S SYS + S +       G     V   + +   ++++ +E +
Sbjct: 589 VWSLSYSGEGSLLA-----SGSADCTVKLWDVTSSTKLTKAEEKN 628


>gi|311899277|dbj|BAJ31685.1| hypothetical protein KSE_59150 [Kitasatospora setae KM-6054]
          Length = 638

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 81/215 (37%), Gaps = 16/215 (7%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSM 259
           +I          +    FSP+ Q++A  +YD      V + +T     P  +     R +
Sbjct: 5   DIPRSGTGHSAPITHVAFSPDGQRLATCSYDG----TVIVWNTADPARPTELATLRHRRL 60

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIV 317
           + A  ++      L +   D+ + ++ V  +  A   + L        S ++ PD  +++
Sbjct: 61  VNASAWNPAEPTLLATASADKTVAVWRVPERGPAVLLQVLARHTDDINSVAWLPDGERLI 120

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S+ +G+  ++ +  +G     +    EA       S +G         GE   + V  
Sbjct: 121 CVSE-DGRATMWSV-PDGGFLAEV-GSHEAHCMMVSISVEG----LVATVGEDGLVAVGD 173

Query: 378 KDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            D   + R    DS+++   WS +G  L  +R   
Sbjct: 174 PDRPGEPRRRHYDSSIEGCGWSRAGDLLAVARDDG 208



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 41/144 (28%), Gaps = 15/144 (10%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD------LQSNATERLT 298
           R    P+      + I    FS +G+R          +   + D      L +    RL 
Sbjct: 2   RTIDIPRSGTGHSAPITHVAFSPDGQRLATCSYDGTVIVWNTADPARPTELATLRHRRLV 61

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQ 357
           N         ++P    ++  +  +    ++ +   G     ++            W P 
Sbjct: 62  NASA------WNPAEPTLLATASADKTVAVWRVPERGPAVLLQVLARHTDDINSVAWLPD 115

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGS 381
           G+ +      G      V   DG 
Sbjct: 116 GERLICVSEDGRATMWSV--PDGG 137


>gi|332992008|gb|AEF02063.1| peptidase S9, prolyl oligopeptidase active site region [Alteromonas
           sp. SN2]
          Length = 686

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 4/95 (4%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAP--TWSPSG 401
              S +    SP G+ ++F         I V K  D      + +DS    P   WS   
Sbjct: 52  GNPSRYQGRVSPDGNSMSFRAPVDGVMNIWVGKIGDFDSATPVTQDSGRGIPLHFWSLDS 111

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPA 435
           R + F++ K+GD    LY IDL+ G  + L     
Sbjct: 112 RYVFFTQDKNGDENWHLYRIDLDSGDIKDLTPYAG 146



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 52/155 (33%), Gaps = 7/155 (4%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNT 300
                   P+ +          R S +G         D  M+I+   +   ++   +T  
Sbjct: 38  QTLPSTLIPREVLFGNPSRYQGRVSPDGNSMSFRAPVDGVMNIWVGKIGDFDSATPVTQD 97

Query: 301 LFINIS-ASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQ--DKEASYFDPVWS 355
               I    +S DS  + F  D+ G     LY +  +  D K ++     +AS  D   +
Sbjct: 98  SGRGIPLHFWSLDSRYVFFTQDKNGDENWHLYRIDLDSGDIKDLTPYAGVQASQMDQNAA 157

Query: 356 -PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            P   ++       +   +  +     Q  L++++
Sbjct: 158 FPGIVVVGMNDRDAKWHDVYKVDVATGQRSLIIQN 192


>gi|228967424|ref|ZP_04128455.1| TolB domain protein [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228792260|gb|EEM39831.1| TolB domain protein [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 406

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 83/244 (34%), Gaps = 59/244 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG  I+     + + +  P++S + + +AY     + IL +Y +     +
Sbjct: 31  RHHNLWI-KVDGKEIQIT---KGEYITGPKWSYDGEWLAYVKGKKQSILELYRL-----K 81

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 + + D++        N  F N+SA 
Sbjct: 82  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLNTFDVEKK------NADFENVSAG 131

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD    +  S+       +     G+    + +D   +               
Sbjct: 132 VGDYAWYPDGKNFLVSSEANLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 187

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNL 392
                      WSP    I+F       +S +   + +++ DGS      + LL E    
Sbjct: 188 DFLALVASGFKWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNEQWFQ 247

Query: 393 QAPT 396
            AP+
Sbjct: 248 WAPS 251



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       + + K DG + ++  +   +  P WS  G  L + + K   +  +LY
Sbjct: 26  KVAFIRH----HNLWI-KVDGKEIQI-TKGEYITGPKWSYDGEWLAYVKGKK-QSILELY 78

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 79  RLK-DGKKVTPFHS--EASNYQWSP 100


>gi|170727533|ref|YP_001761559.1| peptidase S9 prolyl oligopeptidase [Shewanella woodyi ATCC 51908]
 gi|169812880|gb|ACA87464.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella woodyi ATCC 51908]
          Length = 675

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 88/286 (30%), Gaps = 34/286 (11%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV---------VSGIIK 190
           IG+  F S A  + +     +     +T         + +   S           SG  K
Sbjct: 120 IGQSLFVSKADDQLLYRIAPNQAPVPLTAPGTRHADCVAYPKGSRIICVREDHRGSGEPK 179

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM-------- 242
            SL  ++ + A       S       PR SP+  ++A+  +   ++              
Sbjct: 180 TSLVALNLNFAGEGEEMISGADFYSSPRVSPDHTQLAWIAWQHPNMPWDNTELWVGNLDP 239

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
              + +  + I      I  P +S +G +       +   ++Y V         L +   
Sbjct: 240 KGGVHQPKRLITEMEGAITQPLYSPDG-QLYFVADFNNWWNLYRVGANGKVEHVL-DLDA 297

Query: 303 INISASYSPDSSQIVF--------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                 +   +    F           R G+  L  +  +  +++ I+ D        V 
Sbjct: 298 EFAVPDWKLGNHNYAFETSNTIIASYQRNGEVSLIRIYLDTGNKESIAVD-FGEISQLVS 356

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
              G      K + EK   G+ K +G    L+   +    P ++P+
Sbjct: 357 GEDGIYFVGDKITPEK---GIYKVNGRGIELIYAPNL---PAFNPN 396



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 69/192 (35%), Gaps = 26/192 (13%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQ 327
           G+   +S   D+ +   + +    A   LT     +      P  S+I+    D  G  +
Sbjct: 121 GQSLFVSKADDQLLYRIAPN---QAPVPLTAPGTRHADCVAYPKGSRIICVREDHRGSGE 177

Query: 328 LYV------MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVM 376
                    +   G  ++ IS      Y  P  SP    +A+  +           + V 
Sbjct: 178 PKTSLVALNLNFAGEGEEMIS--GADFYSSPRVSPDHTQLAWIAWQHPNMPWDNTELWVG 235

Query: 377 KKD--GSQE---RLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             D  G      RL+ E +  +  P +SP G+ L F    D +    LY +  NG+ E +
Sbjct: 236 NLDPKGGVHQPKRLITEMEGAITQPLYSPDGQ-LYFVA--DFNNWWNLYRVGANGKVEHV 292

Query: 431 INTPAYASDPQW 442
           ++  A  + P W
Sbjct: 293 LDLDAEFAVPDW 304


>gi|32471643|ref|NP_864636.1| serine/threonine-protein kinase [Rhodopirellula baltica SH 1]
 gi|32397014|emb|CAD72317.1| probable serine/threonine-protein kinase [Rhodopirellula baltica SH
           1]
          Length = 1083

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 81/242 (33%), Gaps = 22/242 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ Q       +      + +           +      + +  FSS+GK       
Sbjct: 510 AISPDNQFFLTGLNESIGFCPIKVYRIDTGEEVLGLLGHWHSMESGTFSSDGKLIA---T 566

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D    +   D+     + L +    N S ++  DS ++V+  +RE + +L V+     +
Sbjct: 567 ADRYRQVQVHDMDGKVVKSL-DATTRNESLAFLEDSHRLVYVYEREPQRELRVLDLETGE 625

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAP 395
              I  D   + F     PQG   AF   +    A+ V     S   + ++      +  
Sbjct: 626 HTVIPTDVTVAQFAFS-QPQGKEKAFRIVAQGYGALSVSDFGQSAPFVELDSFSATFRCV 684

Query: 396 TWSPSGRSLIFS--------------RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             S  G SL++S              R         L     NGR   ++  P  A+ P+
Sbjct: 685 AISGDG-SLVYSGTDEGSVYVWRLRDRDHANQLFRPLVVPAANGRIYDIVALPEQATTPR 743

Query: 442 WV 443
           +V
Sbjct: 744 FV 745



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 71/204 (34%), Gaps = 9/204 (4%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +         L       +   +    S       S++GK  L+S  +D +  ++ VDLQ
Sbjct: 436 FGTNRFAFELLNYLASPPSSTLLTQHDSPATGIAVSNDGK-LLVSAGEDGS--VHVVDLQ 492

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASY 349
           +N               + SPD+   +   +   G   + V + +  ++         S 
Sbjct: 493 TNQRLHQYQLPGRLDCIAISPDNQFFLTGLNESIGFCPIKVYRIDTGEEVLGLLGHWHSM 552

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               +S  G LIA    +     + V   DG   + L   +  ++  +      L++  +
Sbjct: 553 ESGTFSSDGKLIA---TADRYRQVQVHDMDGKVVKSLDATTRNESLAFLEDSHRLVYVYE 609

Query: 410 KDGDTGSKLYSIDLNGRNETLINT 433
           ++     +L  +DL     T+I T
Sbjct: 610 REPQR--ELRVLDLETGEHTVIPT 631



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 62/187 (33%), Gaps = 6/187 (3%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V   D              +    FS + + +A  T D    ++V+ MD ++ ++   
Sbjct: 531 IKVYRIDTGEEVLGLLGHWHSMESGTFSSDGKLIA--TADRYRQVQVHDMDGKVVKSLDA 588

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                S+     F  +  R +   +++   ++  +DL++     +   + +   A   P 
Sbjct: 589 TTRNESL----AFLEDSHRLVYVYEREPQRELRVLDLETGEHTVIPTDVTVAQFAFSQPQ 644

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +  F    +G   L V     S          A++     S  G L+      G  + 
Sbjct: 645 GKEKAFRIVAQGYGALSVSDFGQSAPFVELDSFSATFRCVAISGDGSLVYSGTDEGSVYV 704

Query: 373 IGVMKKD 379
             +  +D
Sbjct: 705 WRLRDRD 711


>gi|154491672|ref|ZP_02031298.1| hypothetical protein PARMER_01283 [Parabacteroides merdae ATCC
           43184]
 gi|154087913|gb|EDN86958.1| hypothetical protein PARMER_01283 [Parabacteroides merdae ATCC
           43184]
          Length = 769

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 97/317 (30%), Gaps = 63/317 (19%)

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---EDI 236
           ++ V     +    V+  +DG   +      +  +   +FSP+  +VA+ + ++   ED+
Sbjct: 141 TKRVWRYDTRGDYWVLTLKDGTLRQLGKGLPESSMMFAKFSPDGTRVAFVSNNNIYVEDV 200

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMIL--------APRFSSNGKRALI-------------- 274
               +     D +   +      +           R+S +G+                  
Sbjct: 201 ASGQITQLTHDGSQTIVNGTFDWVYEEEFACRDGFRWSPDGQYIAYWQSDTKGTGVFDII 260

Query: 275 -----------------SVQKDEAMDIYSVDLQSNATE--RLTNTLFINISAS--YSPDS 313
                            +   + A+ +  +     AT    +      N      + P  
Sbjct: 261 NNVDSIYPTILHFPYPKAGSTNSAVKVGYLPAAGGATTWIEIPGDPRNNYIPRMEFIP-G 319

Query: 314 SQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLIAFTKF 366
           S  +F    +  +   ++++ +      + I  D +A++ D      W        +   
Sbjct: 320 SNELFIQQMNRPQNTNKVWIARIGSPTPQNIFTDTDAAWLDTNDNIQWLKDNTWFTWESE 379

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-----SLIFSRKKDGDTGSKLYSI 421
                 +  + +DG + + + +         SP G       + F    +  T   LYS 
Sbjct: 380 RNGWRHLYRISRDGKEIQPVTKG---DFDYISPVGTDLQKGLVYFIASPENYTQRYLYSA 436

Query: 422 DLNGRNETLINTPAYAS 438
           +L G+ E    +PA   
Sbjct: 437 ELFGKGEVKRLSPAGQP 453



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 40/301 (13%), Positives = 93/301 (30%), Gaps = 18/301 (5%)

Query: 82  ISQDSFKQKITNPDSI-PRFQDWNSLGAQVLVTGRVIKEG-KDRLRVEFRLWDVKDRKQI 139
           + + S      +PD     F   N++  + + +G++ +        +    +D    ++ 
Sbjct: 170 LPESSMMFAKFSPDGTRVAFVSNNNIYVEDVASGQITQLTHDGSQTIVNGTFDWVYEEEF 229

Query: 140 IGKKFFSSPASWRKIAHTISDD----IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
             +  F      + IA+  SD     ++  I      + + + F      S      +  
Sbjct: 230 ACRDGFRWSPDGQYIAYWQSDTKGTGVFDIINNVDSIYPTILHFPYPKAGSTNSAVKVGY 289

Query: 196 MDRDGANIRYL-TPSRDQILFEPR--FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +   G    ++  P   +  + PR  F P   ++     +         +       P+ 
Sbjct: 290 LPAAGGATTWIEIPGDPRNNYIPRMEFIPGSNELFIQQMNRPQNTNKVWIARIGSPTPQN 349

Query: 253 I-----GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           I       +       ++  +        +++    +Y +       + +T   F  IS 
Sbjct: 350 IFTDTDAAWLDTNDNIQWLKDNTWFTWESERNGWRHLYRISRDGKEIQPVTKGDFDYISP 409

Query: 308 SYSPDSSQIV-FESDREGKEQLYVMQSN---GSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +     +V F +  E   Q Y+  +      + KR+S   +        SP G     
Sbjct: 410 VGTDLQKGLVYFIASPENYTQRYLYSAELFGKGEVKRLSPAGQPGQHRYNMSPTGKWAVH 469

Query: 364 T 364
           T
Sbjct: 470 T 470



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 48/163 (29%), Gaps = 33/163 (20%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDRE-----GKEQLYVMQSNGSDQKRI--------- 341
           RL  T  I    ++  D  +    S  E     G   +   ++  + ++ I         
Sbjct: 60  RLIQTKGIGAM-TWMKDGERY---SRMEPNAETGGMDIVAYRAKDNRREVIIPSSMFINK 115

Query: 342 SQDKEASYFDPVWSPQ-GDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVED---SNL 392
              K  +     WS   G ++ +           +    V+       R L +    S++
Sbjct: 116 ETGKPIAIRSISWSTDNGKVLIYNNTKRVWRYDTRGDYWVLTLKDGTLRQLGKGLPESSM 175

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
               +SP G  + F         + +Y  D+     T +    
Sbjct: 176 MFAKFSPDGTRVAFVSN------NNIYVEDVASGQITQLTHDG 212


>gi|332526220|ref|ZP_08402353.1| hypothetical protein RBXJA2T_10189 [Rubrivivax benzoatilyticus JA2]
 gi|332110058|gb|EGJ10686.1| hypothetical protein RBXJA2T_10189 [Rubrivivax benzoatilyticus JA2]
          Length = 325

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 61/198 (30%), Gaps = 17/198 (8%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALI---S 275
           P+ Q      YD +D      + TR  +       F   +   R S    G+  L    +
Sbjct: 72  PDGQHFITYEYDLDDDFSTVSIYTRDGQRVDA-ATFDGYVRRVRPSPGQLGRMILTWSPT 130

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                +  +  + +  N    L +   ++ +A + PD    V     +G+ ++       
Sbjct: 131 AGGVGSDQVELIAIDFNGRVTLASYPGVHAAADWLPDGR--VLHLGADGRLRIGTPALPD 188

Query: 336 SDQKRISQDKEASYFDPVW-SPQGDLIAF---TKFSGEKFA---IGVMKKDGSQERLLVE 388
           +   ++S          +W  P G  I       +         + +   DGS    L +
Sbjct: 189 TAVAQLSVSGRTP--AGLWVDPAGQRIITRWNVLWEDGGIRSTDLWISAIDGSGLEQLTD 246

Query: 389 DSNLQAPTWSPSGRSLIF 406
                   WSP G    F
Sbjct: 247 TGLSSYGVWSPDGAFFAF 264



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 82/252 (32%), Gaps = 23/252 (9%)

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD 135
           S +   +  D F     N   +       ++    + T     +G+  +  E+ L D   
Sbjct: 33  SGL---LWHDFFGLDAVNGLQVSDLAGAKTVRVSGVETAVPTPDGQHFITYEYDLDDDFS 89

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
              I       +    R  A T   D Y            R++        G+  + + +
Sbjct: 90  TVSIY------TRDGQRVDAATF--DGYVRRVRPSPGQLGRMILTWSPTAGGVGSDQVEL 141

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +  D  N R    S   +     + P+ + +         I    L DT + +       
Sbjct: 142 IAID-FNGRVTLASYPGVHAAADWLPDGRVLHLGADGRLRIGTPALPDTAVAQLSVSGRT 200

Query: 256 FRSMILAPRFSSNGKRALI---SVQKDEA---MDIYSVDLQSNATERLTNTLFINISASY 309
              + + P     G+R +     + +D      D++   +  +  E+LT+T  ++    +
Sbjct: 201 PAGLWVDPA----GQRIITRWNVLWEDGGIRSTDLWISAIDGSGLEQLTDT-GLSSYGVW 255

Query: 310 SPDSSQIVFESD 321
           SPD +   F+ D
Sbjct: 256 SPDGAFFAFDMD 267


>gi|265762618|ref|ZP_06091186.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263255226|gb|EEZ26572.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 952

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 76/236 (32%), Gaps = 11/236 (4%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I   ++   G      L       +    + +   D D  NI+ LTP   Q    P    
Sbjct: 344 INSRLSYRNGRVYWSELVPGLR-WAHQNYSIIKYYDLDKKNIKTLTPR--QRYLSPAIDE 400

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
             Q +A +    E   ++ L+               +  +     + G   +     D  
Sbjct: 401 QGQHIAVSRPTVEGKNQLVLIQAEKGNELAAFDVPDNAFIKELTFAGGDTIISIAVADSG 460

Query: 282 MDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + +   +  +   + L  T   N  S  +  D     FES   G   +Y +       +R
Sbjct: 461 IRLLQFNFGNGIWKELLKTASANITSPVW-KDGKIF-FESGANGTNNIYSLNPADGQVRR 518

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           ++  +  ++     S  G L  F+ +  + + I  +  D     +L E ++L  P 
Sbjct: 519 MTAARFGAFDPSFGSSDGRLF-FSDYQADGYRIASLPTDS----MLFEKADLNRPA 569



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 11/123 (8%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERL 385
           +L          K + +   A+   PVW   G  I F   +     I  +   DG   R+
Sbjct: 462 RLLQFNFGNGIWKELLKTASANITSPVW-KDGK-IFFESGANGTNNIYSLNPADGQVRRM 519

Query: 386 LVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                    P++ S  GR  +F      D G ++ S+  +    +++   A  + P  + 
Sbjct: 520 TAARFGAFDPSFGSSDGR--LFFSDYQAD-GYRIASLPTD----SMLFEKADLNRPASMP 572

Query: 445 FMD 447
           F++
Sbjct: 573 FVE 575


>gi|157144334|ref|YP_001451653.1| hypothetical protein CKO_00038 [Citrobacter koseri ATCC BAA-895]
 gi|157081539|gb|ABV11217.1| hypothetical protein CKO_00038 [Citrobacter koseri ATCC BAA-895]
          Length = 422

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 51/156 (32%), Gaps = 20/156 (12%)

Query: 280 EAMDIYSVDLQSNATERLTNTLF------INISASY---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T        +N+   +   +P ++ I F   D  G  QL+
Sbjct: 269 GTESTLPAPPAGVVQRRLTFTHDRVFPGLVNVPRHWVRSNPQATDIAFLMRDDRGIVQLW 328

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++ + G + ++++ +         W P G  + F   +     I            L   
Sbjct: 329 LIPAQGGEPRQLTHNATDIQSAFNWHPSGRWLGFVLEN----RIACCDAQSGAIAFLTAS 384

Query: 390 SN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +      A  +SP G  + +  + DG    +L+  
Sbjct: 385 HDSPPSADAVVFSPDGALIAWMEEVDGFR--QLWVT 418



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 46/128 (35%), Gaps = 12/128 (9%)

Query: 256 FRSMILAPR-F---SSNGKRALISVQKD-EAMDIYSVDLQSNATERLT-NTLFINISASY 309
           F  ++  PR +   +         ++ D   + ++ +  Q     +LT N   I  + ++
Sbjct: 294 FPGLVNVPRHWVRSNPQATDIAFLMRDDRGIVQLWLIPAQGGEPRQLTHNATDIQSAFNW 353

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFS 367
            P    + F  +     ++    +       ++   D   S    V+SP G LIA+ +  
Sbjct: 354 HPSGRWLGFVLE----NRIACCDAQSGAIAFLTASHDSPPSADAVVFSPDGALIAWMEEV 409

Query: 368 GEKFAIGV 375
                + V
Sbjct: 410 DGFRQLWV 417



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 50/117 (42%), Gaps = 7/117 (5%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +A+   DD  I++++L+  +     +   N   +  A  +  +G+     ++   
Sbjct: 309 PQATDIAFLMRDDRGIVQLWLIPAQGGEPRQLTHNATDIQSAFNWHPSGRWLGFVLEN-- 366

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
              I   D QS A   LT +     SA    +SPD + I +  + +G  QL+V ++ 
Sbjct: 367 --RIACCDAQSGAIAFLTASHDSPPSADAVVFSPDGALIAWMEEVDGFRQLWVTETE 421



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/130 (11%), Positives = 39/130 (30%), Gaps = 6/130 (4%)

Query: 160 DDIYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           D ++  +      +   N +   ++  +        L ++   G   R LT +   I   
Sbjct: 291 DRVFPGLVNVPRHWVRSNPQATDIAFLMRDDRGIVQLWLIPAQGGEPRQLTHNATDIQSA 350

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             + P+ + + +     E+ +      +          +      A  FS +G       
Sbjct: 351 FNWHPSGRWLGFV---LENRIACCDAQSGAIAFLTASHDSPPSADAVVFSPDGALIAWME 407

Query: 277 QKDEAMDIYS 286
           + D    ++ 
Sbjct: 408 EVDGFRQLWV 417


>gi|91217620|ref|ZP_01254578.1| dipeptidyl-peptidase [Psychroflexus torquis ATCC 700755]
 gi|91184300|gb|EAS70685.1| dipeptidyl-peptidase [Psychroflexus torquis ATCC 700755]
          Length = 783

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 73/208 (35%), Gaps = 12/208 (5%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + ++    D   +  +         A   IG++        +  +        +      
Sbjct: 350 RWISLLNLDTGALETLDRQHDEAWIAGPGIGSYYGGGTL-GWLGDNTHVYYQSEATGYSH 408

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRI 341
           +Y  D++ N   +LT+  +   +   S D +   F S     G+   Y M   G ++ ++
Sbjct: 409 LYVHDVKKNKQIQLTDGEYEIFNPQLSLDQNSWFFTSSEVHPGERHFYKMPVMGGEKIQL 468

Query: 342 SQDKEASYFDPVWSPQGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTW 397
           +  +         SP    +A       + E+  +   K + S E L    S+  ++  W
Sbjct: 469 TSME--GKHQVSLSPDEKYMAVLFSDSNTPEELYLKRTKANSSLEELTSGQSDAFKSYDW 526

Query: 398 -SPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +P    + F+ +      ++LY+ D +
Sbjct: 527 KTP--ELIQFTAEDGAKPYARLYTPDKD 552


>gi|313145490|ref|ZP_07807683.1| dipeptidyl peptidase IV [Bacteroides fragilis 3_1_12]
 gi|313134257|gb|EFR51617.1| dipeptidyl peptidase IV [Bacteroides fragilis 3_1_12]
          Length = 725

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 57/457 (12%), Positives = 135/457 (29%), Gaps = 117/457 (25%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F+        + I     +P  + +    A+     +      + + V   
Sbjct: 15  DLKEINSGKFSP-------ENIYGVVPMPDGEHYTQRNAEGTQIVKYSFRTGEPVEV--- 64

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             L+  +    
Sbjct: 65  VFDVAKARECPFKKFDSYQFSPDGSKILIATETTPIYRHSYT-----AVHYLYPVKRNDK 119

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   VA+   ++     ++L+    
Sbjct: 120 GVTTNNIVEKLSDGGPQQ-----------APVFSPDGNLVAFVRDNN-----IFLVKLLY 163

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +  ++                          A  F+++          +  +  Y+  
Sbjct: 164 GNSESQVTEDGKLNSVLNGIPDWVYEEEFGFNRALEFNADNTMLAYVRFDESEVPSYTFP 223

Query: 289 LQSNATER---LTNTLF----------------------------------INISA---- 307
           L +    R   L +                                     I+       
Sbjct: 224 LFAGEAPRNNALQDYPGEYTYKYPKAGYPNSKVSVHTFDIKSKVTRQVKLPIDADGYIPR 283

Query: 308 -SYSPDSSQIV-FESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDP------VWSPQG 358
             ++ D +++     +R + +  +Y      +  K   +D+   Y +        + P  
Sbjct: 284 IRFTQDPNKLAIMTLNRHQNRFDMYFADPRSTVCKLALRDESPYYINENVFDNIRFYPDN 343

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTG 415
              +F         +     +G+  + +    N +  +   W+P      ++  ++    
Sbjct: 344 --FSFVSDKSGYPHLYWYSMNGNLIKQVT-SGNYEVKSFIGWNPDTNEFYYTSNEESPMR 400

Query: 416 SKLYSIDLNGRNETL-----INTPAYASDPQWVGFMD 447
             +Y ID  G+   L      N+P ++S  +   FM+
Sbjct: 401 QAVYKIDRKGKKVKLSNQQGTNSPIFSSSMK--YFMN 435



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 6/129 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + PD+    F SD+ G   LY    NG+  K+++           W+P  +   +T   
Sbjct: 338 RFYPDN--FSFVSDKSGYPHLYWYSMNGNLIKQVTSGNYEVKSFIGWNPDTNEFYYTSNE 395

Query: 368 GEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNG 425
                  V K D   +++ L       +P +S       F  K        L ++ D  G
Sbjct: 396 ESPMRQAVYKIDRKGKKVKLSNQQGTNSPIFS--SSMKYFMNKFTSLDTPMLITLNDNTG 453

Query: 426 RNETLINTP 434
           +    + T 
Sbjct: 454 KVLKTLVTN 462



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/239 (16%), Positives = 81/239 (33%), Gaps = 30/239 (12%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y     + G  NS++   +  + S + +     +D DG   R             RF+ +
Sbjct: 242 YTYKYPKAGYPNSKVSVHTFDIKSKVTRQVKLPIDADGYIPRI------------RFTQD 289

Query: 223 QQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP------RFSSNGKRALIS 275
             K+A  T    ++   +Y  D R       + +     +        RF  +       
Sbjct: 290 PNKLAIMTLNRHQNRFDMYFADPRSTVCKLALRDESPYYINENVFDNIRFYPD--NFSFV 347

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREG--KEQLYVMQ 332
             K     +Y   +  N  +++T+  +   S   ++PD+++  + S+ E   ++ +Y + 
Sbjct: 348 SDKSGYPHLYWYSMNGNLIKQVTSGNYEVKSFIGWNPDTNEFYYTSNEESPMRQAVYKID 407

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTKFSGEKFAIGVMKKDGSQERLLVED 389
             G   K      +     P++S         FT        I +    G   + LV +
Sbjct: 408 RKGKKVKL---SNQQGTNSPIFSSSMKYFMNKFTSLD-TPMLITLNDNTGKVLKTLVTN 462


>gi|281423524|ref|ZP_06254437.1| OmpA family protein [Prevotella oris F0302]
 gi|281402344|gb|EFB33175.1| OmpA family protein [Prevotella oris F0302]
          Length = 683

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 74/231 (32%), Gaps = 36/231 (15%)

Query: 228 YATYDDEDILRV-YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           Y+     D   + Y   TR +     +     M        NG     + + D+      
Sbjct: 165 YSPMLYGDESNILYFTSTRKEAEGDELSGITGMK-------NGD-IFFAEKNDKGKWSKP 216

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQK---- 339
             +  +      NT F   + ++SPD   +      +D        +M S  SD      
Sbjct: 217 EPVGGSL-----NTAFDEGACAFSPDGRTMYLTQCSTDPTYPRYARIMTSERSDATWGKP 271

Query: 340 ---RISQDKEASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKD-GSQERL---L 386
               IS+D  + +  P  SP G  + FT            + I +     G  E L   +
Sbjct: 272 SELPISRDTLSLFAHPAVSPDGHWLYFTSDMPGGMGGLDLWRIRITAAGLGGAENLGAPI 331

Query: 387 VEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETLINTPAY 436
               N + PT+ P+G  L FS     G  G  L+    + +    I    Y
Sbjct: 332 NTPGNEEFPTFRPNGD-LYFSSDGHPGLGGLDLFMAHFDAQGHPTITHLGY 381



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 68/227 (29%), Gaps = 38/227 (16%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSNGKRALISV-QKDEAMDI 284
               + DI      D      P+ +G   +      A  FS +G+   ++    D     
Sbjct: 195 TGMKNGDIFFAEKNDKGKWSKPEPVGGSLNTAFDEGACAFSPDGRTMYLTQCSTDPTYPR 254

Query: 285 Y-------SVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKE------QL 328
           Y         D        L    +TL +    + SPD   + F SD  G        ++
Sbjct: 255 YARIMTSERSDATWGKPSELPISRDTLSLFAHPAVSPDGHWLYFTSDMPGGMGGLDLWRI 314

Query: 329 YVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSG----EKFAIGVMKKDGSQ 382
            +  +     + +    +   +   P + P GDL  +    G        + +   D   
Sbjct: 315 RITAAGLGGAENLGAPINTPGNEEFPTFRPNGDL--YFSSDGHPGLGGLDLFMAHFDAQG 372

Query: 383 ERLLVE-------DSNLQAPTW-SPSGRSLIFSRKKDGDTGSK-LYS 420
              +         + +    T+  P  R   F+  ++   G   +YS
Sbjct: 373 HPTITHLGYPMNSNGDDFGMTFEGPHNRG-YFASNRNDSRGYDHIYS 418



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 63/200 (31%), Gaps = 25/200 (12%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID----RAPKRIG---NFRS 258
           ++     +   P  SP+   + + +     +  + L   RI        + +G   N   
Sbjct: 276 ISRDTLSLFAHPAVSPDGHWLYFTSDMPGGMGGLDLWRIRITAAGLGGAENLGAPINTPG 335

Query: 259 MILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERLT------NTLFINISASY 309
               P F  NG     S         +D++     +     +T      N+   +   ++
Sbjct: 336 NEEFPTFRPNGD-LYFSSDGHPGLGGLDLFMAHFDAQGHPTITHLGYPMNSNGDDFGMTF 394

Query: 310 SPDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
               ++  F S+R    G + +Y    +  + + +   K   Y    +      +     
Sbjct: 395 EGPHNRGYFASNRNDSRGYDHIY----SFENPEIVQTVKGWVYEKDGYELPHAQVYMVGN 450

Query: 367 SGEKFAIGVMKKDGSQERLL 386
            G    + V + DGS  + L
Sbjct: 451 DGTNVKLSV-RGDGSFTQTL 469



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 32/112 (28%), Gaps = 20/112 (17%)

Query: 350 FDPVWSPQGDLIAFT--KFSGEKFAIGVMKKD-------GSQERLLVED---SNLQAPTW 397
               +SP G  +  T             +          G    L +     S    P  
Sbjct: 230 GACAFSPDGRTMYLTQCSTDPTYPRYARIMTSERSDATWGKPSELPISRDTLSLFAHPAV 289

Query: 398 SPSGRSLIFSRK-KDGDTGSKLYSIDLN----GRNETL---INTPAYASDPQ 441
           SP G  L F+     G  G  L+ I +     G  E L   INTP     P 
Sbjct: 290 SPDGHWLYFTSDMPGGMGGLDLWRIRITAAGLGGAENLGAPINTPGNEEFPT 341


>gi|229152558|ref|ZP_04280748.1| TolB domain protein [Bacillus cereus m1550]
 gi|228630924|gb|EEK87563.1| TolB domain protein [Bacillus cereus m1550]
          Length = 412

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 89/250 (35%), Gaps = 55/250 (22%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG   +     + + +  P++S + + +AY   + ++IL +Y +     +
Sbjct: 35  RHHNLWI-KVDGKEKQLT---KGENITGPKWSHDGEWLAYVKGEKQNILELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 + + D++        N  F N+SA 
Sbjct: 86  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLNTFDVEKK------NADFENVSAG 135

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD    +  S+       +     G+    + +D   +               
Sbjct: 136 VGDYAWYPDGKNFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 191

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPT 396
                      WSP    I+F       +S +   + +++ DGS+  ++ +   N Q   
Sbjct: 192 DFLALVARGFKWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEIVDQMLLNAQWFQ 251

Query: 397 WSPSGRSLIF 406
           W+PS   L +
Sbjct: 252 WAPSKNILAY 261



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       + + K DG +E+ L +  N+  P WS  G  L + + +      +LY
Sbjct: 30  KVAFIRH----HNLWI-KVDG-KEKQLTKGENITGPKWSHDGEWLAYVKGEK-QNILELY 82

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 83  RLK-DGKKVTPFHS--EASNYQWSP 104


>gi|162457166|ref|YP_001619533.1| putative secreted protein [Sorangium cellulosum 'So ce 56']
 gi|161167748|emb|CAN99053.1| putative secreted protein [Sorangium cellulosum 'So ce 56']
          Length = 612

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 43/154 (27%), Gaps = 38/154 (24%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRV---------YLMDTRIDRAPKRIGNFRSM 259
              +    P +S + + + Y + D     R+            + R   A   +      
Sbjct: 399 GDPRGAMMPDWSNDGRTIVYVSTDTGKDGRLAAGAGDLYTVPYNNRQGGAATPLPGAAEA 458

Query: 260 ILA---PRFSSNGKRALI-------SVQKDEAMDIYSVDLQSNATERL-----------T 298
                 P F+ + K            +  +   DI+ +        RL           T
Sbjct: 459 NFNEYYPAFAPDDKLIAFNRTPGPGEMYYNPNSDIHVIPAAGGTPTRLAANDPPACLGVT 518

Query: 299 NTLFINISASYSP-----DSS---QIVFESDREG 324
           +    N    +SP     D      ++F S R+G
Sbjct: 519 SPGIHNSWPQWSPEATTVDGKTYYWVIFSSSRDG 552



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 70/233 (30%), Gaps = 74/233 (31%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKD--------EAMDIYSV---DLQSNATER 296
              +R G+ R   + P +S++G+  +               A D+Y+V   + Q  A   
Sbjct: 393 GFIEREGDPRG-AMMPDWSNDGRTIVYVSTDTGKDGRLAAGAGDLYTVPYNNRQGGAATP 451

Query: 297 LT---NTLFINISASYSPDSSQIVFESDRE-------GKEQLYVMQSNGSDQKRISQDKE 346
           L       F     +++PD   I F                ++V+ + G    R++ +  
Sbjct: 452 LPGAAEANFNEYYPAFAPDDKLIAFNRTPGPGEMYYNPNSDIHVIPAAGGTPTRLAANDP 511

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP-----SG 401
            +                                    +     +   P WSP      G
Sbjct: 512 PACLG---------------------------------VTSPGIHNSWPQWSPEATTVDG 538

Query: 402 R---SLIFSRKKDG--------DTGSKLYSIDLNGRNETLINTPA---YASDP 440
           +    +IFS  +DG           S+LY   +     T+   PA   +  DP
Sbjct: 539 KTYYWVIFSSSRDGYTLQKAPSKKASQLYVTGVVVEGTTVHTYPAIYLWNQDP 591



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 76/271 (28%), Gaps = 58/271 (21%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-----------SSNG 269
           P+ + V +  +   D+    + +  +   P  +    S  +   +           S  G
Sbjct: 272 PDGEAVMFMDHWPWDLAIASVKEDSVGAVPAYVTPGGSEAMNQAWLGPPKMSPAHFSP-G 330

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R  I+    +   ++  D QS       +T   N   ++  D               + 
Sbjct: 331 DRIFITSYGRDKGSVW--DGQS-------HTSMPNARLAWF-DLESPAPTYAEGTNATMA 380

Query: 330 VMQSNGSDQKRISQ----DKEASYFDPVWSPQGDLIAFTKFS-----------GEKFAIG 374
             +   ++                  P WS  G  I +               G+ + + 
Sbjct: 381 KTEMAAAEGTAFGFIEREGDPRGAMMPDWSNDGRTIVYVSTDTGKDGRLAAGAGDLYTVP 440

Query: 375 VMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDG-----DTGSKLYSIDLNG 425
              + G     L      + N   P ++P  + + F+R         +  S ++ I   G
Sbjct: 441 YNNRQGGAATPLPGAAEANFNEYYPAFAPDDKLIAFNRTPGPGEMYYNPNSDIHVIPAAG 500

Query: 426 RNETL-----------INTPA-YASDPQWVG 444
              T            + +P  + S PQW  
Sbjct: 501 GTPTRLAANDPPACLGVTSPGIHNSWPQWSP 531


>gi|34540795|ref|NP_905274.1| OmpA family protein [Porphyromonas gingivalis W83]
 gi|5081701|gb|AAD39496.1|AF145800_1 immunogenic 75 kDa protein PG4 [Porphyromonas gingivalis]
 gi|34397109|gb|AAQ66173.1| OmpA family protein [Porphyromonas gingivalis W83]
          Length = 672

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 44/184 (23%)

Query: 304 NISASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKEASYFDPV------- 353
           +   +Y+PD+S + F S R   +G +   +     +D   I +D +  +  P        
Sbjct: 168 DFGPAYAPDASALYFTSSRSKDDGLDNSSITGLKPNDIYIIKRDAQGRWGRPDSVSGGIN 227

Query: 354 ---------WSPQGDLIAFT-KFSGEKFA--IGVMKKDGSQERLLVEDSNLQ-------- 393
                     +P G  I +T    G  +   + +     S E      S +         
Sbjct: 228 TPWDEGVPTITPDGSTIYYTLAQQGADYDRTVQIYSAARSGEGGWSNGSLVDIMRDSLRM 287

Query: 394 --APTWSPSGRSLIFSRKKDGDTGSK-LYSIDLN----GRNETL---INTPAYASDPQWV 443
              P+ S SG  L F     G  G K +Y + ++    G  E L   INTP     P   
Sbjct: 288 AAHPSMSASGDYLYFVSNIGGSYGGKDIYRVKVSDRSYGSPENLGPDINTPGDEMFP--- 344

Query: 444 GFMD 447
            F+D
Sbjct: 345 -FID 347



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 65/217 (29%), Gaps = 45/217 (20%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAM-------------DIYSV--DLQSNATERLTN 299
           N       P ++ +      +  + +               DIY +  D Q       + 
Sbjct: 163 NSARGDFGPAYAPDASALYFTSSRSKDDGLDNSSITGLKPNDIYIIKRDAQGRWGRPDSV 222

Query: 300 TLFINIS-----ASYSPDSSQIVFE-----SDREGKEQLYVMQSNG------SDQKRISQ 343
           +  IN        + +PD S I +      +D +   Q+Y    +G           I +
Sbjct: 223 SGGINTPWDEGVPTITPDGSTIYYTLAQQGADYDRTVQIYSAARSGEGGWSNGSLVDIMR 282

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKD----GSQERL---LVEDSNLQ 393
           D       P  S  GD + F    G  +    I  +K      GS E L   +    +  
Sbjct: 283 DSLRMAAHPSMSASGDYLYFVSNIGGSYGGKDIYRVKVSDRSYGSPENLGPDINTPGDEM 342

Query: 394 APTWSPSGRSLIFSRKKD--GDTGSKLYSIDLNGRNE 428
            P     G S +F       G  G  ++   L+   +
Sbjct: 343 FPFI--DGDSTLFFASDGHAGLGGLDIFKATLDSTGQ 377


>gi|297797367|ref|XP_002866568.1| hypothetical protein ARALYDRAFT_919661 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312403|gb|EFH42827.1| hypothetical protein ARALYDRAFT_919661 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 513

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 76/203 (37%), Gaps = 13/203 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
               +    ++   FS + + +A ++ D   I+       +     K +G+ + +++   
Sbjct: 213 QTLKNHTDEVWFLEFSHDGKYLASSSKDKSAIIWEIDAQGKFSEKHKLVGHEKPVVM-VL 271

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVF-ESDR 322
           +S + K+        E   I S D++S    +        ++S  +  D S I+   +DR
Sbjct: 272 WSPDDKQVATC---GENEVIRSWDVESGEFIQSYERNGVGSVSCGWFHDGSGIIAGMTDR 328

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                + +   +G++       +E    D   +  G  +           I +  ++   
Sbjct: 329 S----ICLWNLDGTELVHEQGPREQKLSDVAMTNDGKWLVSV---DSVHVISLFNRETRA 381

Query: 383 ERLLVEDSNLQAPTWSPSGRSLI 405
            RL+ E+  + + + S + + L+
Sbjct: 382 VRLITEEDMITSFSLSKNNKHLL 404


>gi|294674865|ref|YP_003575481.1| lipoprotein [Prevotella ruminicola 23]
 gi|294472394|gb|ADE81783.1| putative lipoprotein [Prevotella ruminicola 23]
          Length = 495

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 49/148 (33%), Gaps = 27/148 (18%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGN----- 255
           D     P FS + + + Y T     +   +            D +       +       
Sbjct: 286 DDWETYPAFSADGKTLFYCTAKPYRVPAEWDKVKYSLCKIAFDAKTGTYGDHVDTLLNAR 345

Query: 256 -FRSMILAPRFSSNGKRALISVQKDEA-------MDIYSVDLQSNATERLTNTLFINIS- 306
            +      PR S +GK  + +V             D++ ++LQ+  T  L+     +   
Sbjct: 346 EWDKSFTYPRASYDGKWLMFNVTNCGNFPVNHPEADLWLMNLQTGETHPLSGANSDDTES 405

Query: 307 -ASYSPDSSQIVFESDREGKEQLYVMQS 333
             ++S +S   VF S RE    +Y M  
Sbjct: 406 FHNWSLNSHWFVFSSRRE--NGVYSMPY 431



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/245 (11%), Positives = 68/245 (27%), Gaps = 45/245 (18%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----------- 277
                E    +   D +      +  +  +      +  +G     S             
Sbjct: 196 MQIRGEHGGTLIYKDGKQSYLTTKTDSTVANTSYSYWHPDGDYCAFSTNSIHQSFFVGTG 255

Query: 278 -----KDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREG------ 324
                 D   ++  +D ++N      L  T       ++S D   + + + +        
Sbjct: 256 QRIEVYDTFSNVLVLDTRTNELVLCPLLQTDDWETYPAFSADGKTLFYCTAKPYRVPAEW 315

Query: 325 ---KEQLYVMQSN------GSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKF-- 371
              K  L  +  +      G     +   +E   S+  P  S  G  + F   +   F  
Sbjct: 316 DKVKYSLCKIAFDAKTGTYGDHVDTLLNAREWDKSFTYPRASYDGKWLMFNVTNCGNFPV 375

Query: 372 -----AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 + +M     +   L   ++    +   WS +    +FS +++    S  Y   +
Sbjct: 376 NHPEADLWLMNLQTGETHPLSGANSDDTESFHNWSLNSHWFVFSSRRENGVYSMPYIAFI 435

Query: 424 NGRNE 428
           + +  
Sbjct: 436 DDKGR 440


>gi|88601795|ref|YP_501973.1| hypothetical protein Mhun_0492 [Methanospirillum hungatei JF-1]
 gi|88187257|gb|ABD40254.1| conserved hypothetical protein [Methanospirillum hungatei JF-1]
          Length = 195

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 51/155 (32%), Gaps = 12/155 (7%)

Query: 219 FSPNQQKVAYATYDDEDILR----VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           + P+  K      D  D       +Y          +           P  SS  +  + 
Sbjct: 34  WQPDIDKDWIVWEDWRDGAHSRGDIYAFHLPTRTEVQVTDTSWGDWF-PGVSS--EWVVW 90

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             QK    DI+ ++L +    ++T           S    Q+V+  +R G   +Y    +
Sbjct: 91  QSQKYGNFDIFDMNLTTRQEVQITTDPSRQWLPRIS--GDQVVWIDERNGNWYMYGYNLS 148

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
              + +IS   + +   P  S   + + + +++  
Sbjct: 149 SRKEYQISSGPD-NEAWPDIS--NETVVYVEYAKR 180


>gi|325298787|ref|YP_004258704.1| Dipeptidyl-peptidase IV [Bacteroides salanitronis DSM 18170]
 gi|324318340|gb|ADY36231.1| Dipeptidyl-peptidase IV [Bacteroides salanitronis DSM 18170]
          Length = 733

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 70/200 (35%), Gaps = 38/200 (19%)

Query: 198 RDG----ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            DG     NI  + P  D   +  + S +++++   ++     +            P  I
Sbjct: 29  ADGTYRPQNIYGIKPMLDGEHYT-QISADRKRIVKYSFKTGKEVESIFDVETARDCP--I 85

Query: 254 GNFRSMILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            +F   I+    S + K  LI        ++    + Y  ++++N  E L+         
Sbjct: 86  KSFDDYIM----SPDEKLILIQTETKPIYRRSFTAEYYIYNIRNNTIEPLSKN-GPQQVP 140

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---YFDPVW---------- 354
            +SPD  QI F  D        V    G+ + ++++D E +      P W          
Sbjct: 141 LFSPDGFQIAFVRD---NNIFLVKLLFGNSESQVTKDGEYNKVLNGIPDWVYEEEFGFNR 197

Query: 355 ----SPQGDLIAFTKFSGEK 370
               S    +IA+ +F   +
Sbjct: 198 AFDFSADSKMIAYIRFDESQ 217



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 58/169 (34%), Gaps = 36/169 (21%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD---- 321
           S++ KR +    K         D+++     + +          SPD   I+ +++    
Sbjct: 54  SADRKRIVKYSFKTGKEVESIFDVETARDCPIKSFDDY----IMSPDEKLILIQTETKPI 109

Query: 322 --REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             R    + Y+     +  + +S  K      P++SP G  IAF + +     I ++K  
Sbjct: 110 YRRSFTAEYYIYNIRNNTIEPLS--KNGPQQVPLFSPDGFQIAFVRDN----NIFLVKLL 163

Query: 380 -GSQERLLVEDS-----NLQAPTW--------------SPSGRSLIFSR 408
            G+ E  + +D          P W              S   + + + R
Sbjct: 164 FGNSESQVTKDGEYNKVLNGIPDWVYEEEFGFNRAFDFSADSKMIAYIR 212


>gi|262383719|ref|ZP_06076855.1| dipeptidyl aminopeptidase IV [Bacteroides sp. 2_1_33B]
 gi|262294617|gb|EEY82549.1| dipeptidyl aminopeptidase IV [Bacteroides sp. 2_1_33B]
          Length = 724

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 50/324 (15%), Positives = 94/324 (29%), Gaps = 77/324 (23%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           ++ R     +++ +          D DG     ++ +   IL          +   + Y 
Sbjct: 68  YSYRTGNPVDTLFNARKARECTFTDFDGY---TISSTGHHILVW--------RDTESIYR 116

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS- 291
                 VY  D R +   K I + +   + P FS +G+       +D  + I   D  + 
Sbjct: 117 RSTKAVVYDYDVRRN-YVKPISDAKGKQMIPTFSPDGRMCAYV--RDNNIWIRKFDFDTE 173

Query: 292 ------NATER----LTNTLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                     +    +T+ ++    A     ++SPDS  + F    E +   Y MQ  G 
Sbjct: 174 VQVTKDGELNKILNGITDWVYEEEFAVTNLMAWSPDSEYLAFVRFDESEVPEYSMQMYGE 233

Query: 337 -------------------------------DQKRISQDKEASYFDPVWS----PQGDLI 361
                                          D K +    E  ++ P  S    P    I
Sbjct: 234 GLYPGYYEYKYPKAGQKNSKVSVHSYSIVTKDTKEMKVPVEGDFYIPRISFTQNPDQLAI 293

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLL--------VEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                    F +          RL+        V+   L +  +  +G    F+   + D
Sbjct: 294 MTLNRQQNVFNMYYANPKSGVFRLILREENKCYVDSDWLTSIQFLNNG----FTYVSEQD 349

Query: 414 TGSKLYSIDLNGRNETLINTPAYA 437
             S +Y     G  +  +    + 
Sbjct: 350 GYSHIYLYSPTGVMQRQVTQGNWD 373


>gi|255553492|ref|XP_002517787.1| Angio-associated migratory cell protein, putative [Ricinus
           communis]
 gi|223543059|gb|EEF44594.1| Angio-associated migratory cell protein, putative [Ricinus
           communis]
          Length = 471

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 77/197 (39%), Gaps = 28/197 (14%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
            GK + SSP   +K+A        +     KG+   R++       SG    ++ + +  
Sbjct: 301 TGKTY-SSPEEMKKVA-------LERYNKMKGNSPERLV-------SGSDDFTMFLWEPA 345

Query: 200 -GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
              + +       Q++    FSP+ Q VA A++D      V L +    +          
Sbjct: 346 VSKHPKTRMTGHQQLVNHVYFSPDGQWVASASFDR----SVKLWNGVTGKFVAAFRGHVG 401

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIV 317
            +    +S++  R L+S  KD  + ++  D+++   ++ L        +  +SPD  ++ 
Sbjct: 402 PVYQISWSAD-SRLLLSGSKDSTLKVW--DIRTQKLKQDLPGHADEVYAVDWSPDGEKVA 458

Query: 318 FESDREGKEQLYVMQSN 334
                 GK+++  +   
Sbjct: 459 ----SGGKDRVLKLWMG 471



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 36/105 (34%), Gaps = 9/105 (8%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + +    FSP+ +++A  + D      V L D             ++ +L   +S +
Sbjct: 104 GHAEAVLSVAFSPDGRQLASGSGDT----TVRLWDLSTQTPMFTCTGHKNWVLCIAWSPD 159

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSP 311
           GK  + S  K   +  +  D Q+       L          S+ P
Sbjct: 160 GKYLV-SGSKAGELQCW--DPQTGKPFGNPLVGHKKWITGISWEP 201



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 85/295 (28%), Gaps = 48/295 (16%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           R+WDV  RK +I               HT++    +      G   +     +  V    
Sbjct: 221 RIWDVSLRKCVISLT-----------GHTLAITCVKWGGD--GVIYTGSQDCTIKVWETT 267

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               +  +   G  +  L  S + +L    F    +   Y++ ++   + +   +     
Sbjct: 268 QGKLIRELKGHGHWVNSLALSTEYVLRTGAFDHTGK--TYSSPEEMKKVALERYNKMKGN 325

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           +P+R+                    +S   D  M ++   +  +   R+T    +     
Sbjct: 326 SPERL--------------------VSGSDDFTMFLWEPAVSKHPKTRMTGHQQLVNHVY 365

Query: 309 YSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +SPD   +   S DR     + +            +      +   WS    L+      
Sbjct: 366 FSPDGQWVASASFDRS----VKLWNGVTGKFVAAFRGHVGPVYQISWSADSRLLLSGSKD 421

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
                + V      + +  +     +     WSP G  +        D   KL+ 
Sbjct: 422 ST---LKVWDIRTQKLKQDLPGHADEVYAVDWSPDGEKVA---SGGKDRVLKLWM 470



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 36/84 (42%), Gaps = 3/84 (3%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           ++R    I      +L+  FS +G++   S   D  + ++ +  Q+      T      +
Sbjct: 95  VNRCSATIAGHAEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLSTQTPMFT-CTGHKNWVL 152

Query: 306 SASYSPDSSQIVFESDREGKEQLY 329
             ++SPD   +V  S + G+ Q +
Sbjct: 153 CIAWSPDGKYLVSGS-KAGELQCW 175



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 3/62 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD  Q+   S   G   + +   +           +       WSP G  +     +
Sbjct: 113 AFSPDGRQLASGS---GDTTVRLWDLSTQTPMFTCTGHKNWVLCIAWSPDGKYLVSGSKA 169

Query: 368 GE 369
           GE
Sbjct: 170 GE 171


>gi|221636268|ref|YP_002524144.1| peptidase domain protein [Thermomicrobium roseum DSM 5159]
 gi|221157902|gb|ACM07020.1| peptidase domain protein [Thermomicrobium roseum DSM 5159]
          Length = 638

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 46/247 (18%), Positives = 88/247 (35%), Gaps = 49/247 (19%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A+ +    D  R   + T   R  + + N    +    +S  G R  ++  +D    I  
Sbjct: 30  AWWSLALLDRDRTLWLATGDGRQRQPVAN-DLAVSRVLWSPEGGRLALAGVQDGTPVIGI 88

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V   +   E  T  +     AS+S D   + +   R+G E + +    G+  + +S    
Sbjct: 89  V---TTGAEPTTRIVGRGSEASWSGDGRWLAW---RDG-ESVVIATREGNVVRSVS---- 137

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKF-----------------AIGVMKKDGSQERLLVED 389
            +    VWS  G  +AF + + E                    + ++ +   Q   +   
Sbjct: 138 VAARTLVWSADGRWLAFQRATDESLDGPCPVMELGWIEAASGRVEIVDRAIGQITWVGVA 197

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAY--------ASDP 440
              + P        L+++    G   ++L  +D  +G +  L N P          + D 
Sbjct: 198 GVAEQPR-------LVYA----GALDARLRWVDPASGASGVLWNGPIETCRMPLLVSGDG 246

Query: 441 QWVGFMD 447
           QW+GF+D
Sbjct: 247 QWLGFVD 253



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 77/283 (27%), Gaps = 71/283 (25%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S + + +A+      D   V +     +         R+++    +S++G+       
Sbjct: 107 SWSGDGRWLAW-----RDGESVVIATREGNVVRSVSVAARTLV----WSADGRWLAFQRA 157

Query: 278 KDEAMD-------IYSVDLQSNATE---------------------RLTNTLFINISASY 309
            DE++D       +  ++  S   E                     RL     ++    +
Sbjct: 158 TDESLDGPCPVMELGWIEAASGRVEIVDRAIGQITWVGVAGVAEQPRLVYAGALDARLRW 217

Query: 310 -------------------------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
                                    S D   + F     G + L ++     + +RI   
Sbjct: 218 VDPASGASGVLWNGPIETCRMPLLVSGDGQWLGFVDAVGGGDDLILLNLVSGEARRIVDV 277

Query: 345 KEASYFDPVWSPQ------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                   V SP          +  ++       +  +     +  +   D  +     S
Sbjct: 278 PVGYPGRQVPSPYVWLDPLARFLYVSRSFPT--VVTRIDLVTGERAIAASDPGILV-AIS 334

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           P G  L F +   G     +      GR ETL      A +P 
Sbjct: 335 PEGERLAFVQNSPGKPPVLVIVEPATGRRETLERIGWAAWEPA 377


>gi|325928287|ref|ZP_08189490.1| dipeptidyl-peptidase IV [Xanthomonas perforans 91-118]
 gi|325541377|gb|EGD12916.1| dipeptidyl-peptidase IV [Xanthomonas perforans 91-118]
          Length = 734

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 68/205 (33%), Gaps = 55/205 (26%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI------------------------- 246
             L +P+ +P+  +V +    D D  ++ L +  I                         
Sbjct: 21  PTLMKPKVAPDGSRVTFLRGKDNDRNQLDLWEYDIASGQTRLLVDSKVVLPGTEVLSDVE 80

Query: 247 --DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTL 301
              R  +RI  F  ++   +++ +    L  +      ++Y  DL+        +LT+  
Sbjct: 81  KARRERQRIAAFTGIVDY-QWAPDAHALLFPL----GGELYLYDLRKTGAAAVRKLTHGE 135

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-------- 353
                A  SP    + F  +R     ++V++    +  +++ D   +  + V        
Sbjct: 136 GFATDAKLSPKGGFVSFVRER----NVWVIELANGNALQLTHDGSETIGNGVAEFVADEE 191

Query: 354 --------WSPQGDLIAFTKFSGEK 370
                   W+P    IAF +    +
Sbjct: 192 MDRHTGYWWAPDDSAIAFARIDESQ 216



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/320 (11%), Positives = 87/320 (27%), Gaps = 111/320 (34%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+   + +        L +Y +      A +++ +        + S  G       ++
Sbjct: 100 WAPDAHALLFP---LGGELYLYDLRKTGAAAVRKLTHGEGFATDAKLSPKGGFVSFVRER 156

Query: 279 DEAMDIYSVDLQSNATERLTNTLFI-----------------NISASYSPDSSQIVFE-- 319
           +    ++ ++L +    +LT+                     +    ++PD S I F   
Sbjct: 157 N----VWVIELANGNALQLTHDGSETIGNGVAEFVADEEMDRHTGYWWAPDDSAIAFARI 212

Query: 320 ---------------------SDR-----------------------------EGKEQLY 329
                                S R                                  +Y
Sbjct: 213 DESQVPVQKRPEVYADHTEVISQRYPQAGQPNVAVQLGVIAPRAKATPRWIDLGKNPDIY 272

Query: 330 VMQSNGSDQKRISQDKEASY----------------------FDPVWSP---------QG 358
           + + +  D +R++  +++                          P W P          G
Sbjct: 273 LARVDWRDAQRLTFQRQSRDQKTLELIETTLASGVQRTLVTETSPTWVPLSNDLRFLKDG 332

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDTGS 416
             + +         + +  +DG     L   + +     +   ++  + F+  KDG T +
Sbjct: 333 RFL-WNSERSGYEHLYLASEDGRTLTPLTSGNWVVDALLAVDEQAGNVYFAASKDGPTQT 391

Query: 417 KLYSIDL-NGRNETLINTPA 435
            +Y++ L  G  E    T  
Sbjct: 392 HIYAVPLAGGAIEKRSVTNG 411


>gi|297617478|ref|YP_003702637.1| hypothetical protein Slip_1304 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145315|gb|ADI02072.1| WD40 domain protein beta Propeller [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 586

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 44/289 (15%), Positives = 83/289 (28%), Gaps = 37/289 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR--VYLMDTRIDRA 249
            L ++D + A         + +     +S + Q +AY     +D       L   R D  
Sbjct: 181 RLWLLDMNRAEAEPQLVPGENVDQIIGWSEDGQWLAYLRRTSDDEFSDDTRLWVVRADGE 240

Query: 250 PKRIGNFRSMILAP-RFSSNGKRALISVQKDE----AMDIYSVDLQSNATE--RLTNTLF 302
                + + ++     +S                     +    L++      +L +   
Sbjct: 241 QSLCLDDQPVVRGTLAWSPAENAIAYQTMMLGKNASDQSLKLAVLENGKWVSNKLVDCRG 300

Query: 303 INISASYSPDSSQIVFESDR--EGK--EQLYVMQSNGSDQKRISQDKEASYFDPV----- 353
                S+ P    I     R  +GK    +  +   G   +  +     +  D       
Sbjct: 301 TIAGLSWFPGGCSIAVTWRRGDDGKEGPVIDRIDLGGKCTRLFTLPSNGAESDESGLYPC 360

Query: 354 ------WSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSP 399
                  SP G   A+         + +   + V+     Q+   + D     +  TWSP
Sbjct: 361 EIRGLKLSPDGRYAAYFLALNSESLNADGMTLQVVDLQNPQKLFTIGDALGYPEWLTWSP 420

Query: 400 SGRSLIFSR--KKDGDTGSKLYSID-LNGRNETLINTPAY--ASDPQWV 443
             R L       +   T  +L  +D +N R +      A    S P W 
Sbjct: 421 DSRKLACIVGCDRIASTNKRLKVVDIVNSRFQEQDLGEADMVDSRPFWG 469



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 52/266 (19%), Positives = 92/266 (34%), Gaps = 46/266 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFRSM-------------ILAP 263
            + P    +A      +D     ++D   +     R+    S              I   
Sbjct: 306 SWFPGGCSIAVTWRRGDDGKEGPVIDRIDLGGKCTRLFTLPSNGAESDESGLYPCEIRGL 365

Query: 264 RFSSNGKRALI-------SVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQ 315
           + S +G+ A         S+  D    +  VDLQ+      + + L      ++SPDS +
Sbjct: 366 KLSPDGRYAAYFLALNSESLNADGMT-LQVVDLQNPQKLFTIGDALGYPEWLTWSPDSRK 424

Query: 316 IVFES--DR--EGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +      DR     ++L V+   N   Q++   + +     P W   G  + + +     
Sbjct: 425 LACIVGCDRIASTNKRLKVVDIVNSRFQEQDLGEADMVDSRPFWGINGQYLFYARGRESG 484

Query: 371 FAIGV-----MKKDGSQE--RLLVEDSNLQAP---------TWSPSGRSLIFSRKKDGDT 414
             +       ++  G Q   R   E+  +  P         + SP G+ L+F R    D 
Sbjct: 485 TWLAEGRHQEVRVPGQQVWCRKWTEEYPVTVPENTQADYPLSLSPDGKFLVFERLDWFDQ 544

Query: 415 GSKLYSIDLNGRNETLINTPAYASDP 440
           GS LY +DL G N+ +        DP
Sbjct: 545 GS-LYLLDL-GTNQEVKVLDNLQVDP 568



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 10/109 (9%)

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKF-- 371
           ++ F  D    E+L+++  N ++ +      E       WS  G  +A+ +  S ++F  
Sbjct: 173 RMAFIHD----ERLWLLDMNRAEAEPQLVPGENVDQIIGWSEDGQWLAYLRRTSDDEFSD 228

Query: 372 --AIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSK 417
              + V++ DG Q   L +   ++    WSP+  ++ +     G   S 
Sbjct: 229 DTRLWVVRADGEQSLCLDDQPVVRGTLAWSPAENAIAYQTMMLGKNASD 277


>gi|115923347|ref|XP_789472.2| PREDICTED: similar to telomerase-associated protein 1
            [Strongylocentrotus purpuratus]
 gi|115953861|ref|XP_001183959.1| PREDICTED: similar to telomerase-associated protein 1
            [Strongylocentrotus purpuratus]
          Length = 2666

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 71/186 (38%), Gaps = 9/186 (4%)

Query: 191  NSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
                V+  DG + +  T   +   +    + P  + +   ++D      + + DT   + 
Sbjct: 1839 WDCRVLIWDGRSGKQTTDITEPRPISCLSYHPEGKLLVTGSWDS----TLKIWDTFNKKR 1894

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
               +    S + A  +S  G+    S   D A+ ++S D  +       ++  IN   ++
Sbjct: 1895 VAILRGHHSSVRAVTYSPTGRHIA-SASLDGAVKLWSADTGTQVGSLCGHSQPIN-HIAF 1952

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            S +  ++V  S+ + K +++     G          E++     +S  G+ +A    SGE
Sbjct: 1953 SKNGRELVTVSN-DHKTKIWSGNL-GKQLATFKGKDESASTQAAFSADGEFVAMGYHSGE 2010

Query: 370  KFAIGV 375
               I V
Sbjct: 2011 VKVIEV 2016


>gi|332829099|gb|EGK01763.1| hypothetical protein HMPREF9455_01911 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 399

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 65/193 (33%), Gaps = 16/193 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPR---FSSNGKRA 272
           FSP+ + +       + I +  +         K+        +    PR   F  NGK A
Sbjct: 200 FSPDGKHLFADDLGTDKIHKFDVNPNATRDYLKQGTPPSFKVADASGPRHLAFHPNGKYA 259

Query: 273 LISVQKDEAMDIYSVDLQSNATERL------TNTLFINISASYSPDSSQIVFESDR---E 323
            +  +   A+  ++ D       ++      T     +     SPD  + ++ S+R   +
Sbjct: 260 YLINELSGAVIAFNYDGIKGDLTQIQSIQADTLDAKGSADIHISPDG-KFLYASNRLKGD 318

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G     + Q++G   K   Q+      + V +P G  +       +   I +  ++    
Sbjct: 319 GLAIFSINQADGKLTKAGYQETGIHPRNFVITPNGKYLLVASRDSDIIQIFLRNENTGLL 378

Query: 384 RLLVEDSNLQAPT 396
               +D  L  P 
Sbjct: 379 EDTFKDIKLDMPV 391


>gi|258508859|ref|YP_003171610.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lactobacillus
           rhamnosus GG]
 gi|257148786|emb|CAR87759.1| Dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lactobacillus
           rhamnosus GG]
 gi|259650161|dbj|BAI42323.1| peptidase [Lactobacillus rhamnosus GG]
          Length = 661

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 68/200 (34%), Gaps = 17/200 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATER 296
           R+YL++ R  +     G  +     P+ S + +     S   D+   ++   +     ++
Sbjct: 41  RIYLVNRRGQKTT--YGFDQKHDRHPQVSPDQQWLAFLSQAADKTTQVFLQRIDGGGAQQ 98

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            +N      +  + PDS  ++ ++    K Q     +       +++         +   
Sbjct: 99  FSNEKEGVTNFGWQPDSKALLLQTTVGAKPQSSESDAKKPQPVTVTRAPYKLNGVGLLKE 158

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK----DG 412
                   +   +K +  VMK+            +      SP G+ + F+ ++      
Sbjct: 159 NVTYELRIQQRRQKTSHLVMKR----------QHDFDLGAISPDGQKIAFAAERLPDDPN 208

Query: 413 DTGSKLYSIDLNGRNETLIN 432
           D     Y  DL  +  T++N
Sbjct: 209 DFSQATYLFDLTSQKITMVN 228



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/288 (12%), Positives = 89/288 (30%), Gaps = 54/288 (18%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            + D+++ ++       +R  FV E+ +S         + +++R G    Y    +    
Sbjct: 4   AATDLFKLVSLSYPIATNRGFFVQENRISEEDNTYYQRIYLVNRRGQKTTYGFDQKH--D 61

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P+ SP+QQ +A+ +   +   +V+L       A ++  N +  +    +  + K  L+
Sbjct: 62  RHPQVSPDQQWLAFLSQAADKTTQVFLQRIDGGGA-QQFSNEKEGVTNFGWQPDSKALLL 120

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLF-------------------------------- 302
                        D +      +T   +                                
Sbjct: 121 QTTVGAKPQSSESDAKKPQPVTVTRAPYKLNGVGLLKENVTYELRIQQRRQKTSHLVMKR 180

Query: 303 ---INISASYSPDSSQIVFESDR------EGKEQLYVMQSNGSDQKRIS-QDKEASYFDP 352
               ++ A  SPD  +I F ++R      +  +  Y+          ++    +A+    
Sbjct: 181 QHDFDLGA-ISPDGQKIAFAAERLPDDPNDFSQATYLFDLTSQKITMVNEHLPQAALSPE 239

Query: 353 VWSPQGDLIAFTKFSG-----EKFAIGVMKKDGSQERLLVEDSNLQAP 395
            +S  G  +             +  +        + + + +D +   P
Sbjct: 240 AFSADGQQLLLVGSDNHLPNVSQDHLWHYDLTNHELQDVADDVDFDIP 287



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 64/178 (35%), Gaps = 33/178 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILR-----VYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKR 271
             SP+ QK+A+A     D         YL D    +      +     L+P  FS++G++
Sbjct: 188 AISPDGQKIAFAAERLPDDPNDFSQATYLFDLTSQKITMVNEHLPQAALSPEAFSADGQQ 247

Query: 272 ALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            L+    +   +     ++  DL ++  + + + +  +I    + D     F+ D  GK 
Sbjct: 248 LLLVGSDNHLPNVSQDHLWHYDLTNHELQDVADDVDFDIPGYVNSD-----FQQDLSGKV 302

Query: 327 QLYVMQ---------------SNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFS 367
             +V                   G   +R++   D      D   +P    + FT+ +
Sbjct: 303 ADFVTADYYLARGFDHGKMSLYAGGPDERLTPLIDGRRHVTDFALTPDHRGVVFTEST 360


>gi|239990881|ref|ZP_04711545.1| WD-40 repeat-containing protein [Streptomyces roseosporus NRRL
           11379]
 gi|291447891|ref|ZP_06587281.1| WD-40 repeat protein [Streptomyces roseosporus NRRL 15998]
 gi|291350838|gb|EFE77742.1| WD-40 repeat protein [Streptomyces roseosporus NRRL 15998]
          Length = 1303

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/325 (16%), Positives = 107/325 (32%), Gaps = 47/325 (14%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV---IKEGKDRLRVEFRLWDVKDR 136
            ++ +D    + T     P      + GA++  +GR        ++R  +  RL D++  
Sbjct: 670 EVVVRDLATGRPTGASPGP-----ANAGAEMGASGRTLITYNTSENRYGI--RLQDMRSG 722

Query: 137 KQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           K+++  +    P A+   +  +++D     +            F   +V +     +LCV
Sbjct: 723 KELLTLREKRDPRAAVPPVVQSLADVNRLLVEERVPAAMEDGAFPDATVSADDRHLALCV 782

Query: 196 MDRDGANIRYLTPSRDQILFEPR---------------FSPNQQKVAYATYDDEDILRVY 240
               G  ++    +  + L  P                F+P+ + +A  T      +R++
Sbjct: 783 P---GKPLQVWDVAERRRLSTPWAPQATADQCLEESVHFTPDGRHLALTT---GSGVRIW 836

Query: 241 LMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            + T  +R   R  + R +  +         +G   L+   +     +    L       
Sbjct: 837 AIATGRERPEIRHTDLRRVTFSADGEFLVGEDGTEILLWRLRSADYPVLRYRLSGGTVTD 896

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L             PD   I + S  E      V   +          +   +   V+SP
Sbjct: 897 L----------RVDPDEGWIRYLSGPEDSWGTEVHTLDLGRVGTARW-RNRPFMSTVFSP 945

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGS 381
            G LIA T  S +   + +   DG 
Sbjct: 946 DGALIATTHLSADDRTVHIRTMDGR 970


>gi|297163075|gb|ADI12787.1| phosphoesterase [Streptomyces bingchenggensis BCW-1]
          Length = 916

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 76/203 (37%), Gaps = 40/203 (19%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +V   +  I     R+   +  I++   S +G     SV  D    +  VDL++  T++L
Sbjct: 64  QVVSSNQYIAPYGDRLVINQGKIMSSSVSPDGTHMAASVT-DGGAALAIVDLKNWKTQQL 122

Query: 298 TNT--------LFINI---SASYSPDSSQIVFESDREGKEQLYVMQSNG--SDQKRISQD 344
            +            N+     +YSPD  Q+ +    +G   ++ + ++G  S  + +S  
Sbjct: 123 VSNAASSNPRISSNNVGQEGPTYSPDGKQL-WLGQPDG-YTVFTVNADGSVSSPRTVSIP 180

Query: 345 KEAS----YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--- 397
            + S         +S  G  + ++  +G+   + +    G+ ++           +W   
Sbjct: 181 AQGSKHALVGAAAFSADGKTV-YSAVNGQNRVVAIDAATGTIKQ-----------SWNVG 228

Query: 398 -SPSGRSLI----FSRKKDGDTG 415
            +P G  ++    +   + G   
Sbjct: 229 NAPRGMVIVGNKLYVSNEGGRPA 251



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 41/113 (36%), Gaps = 23/113 (20%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKK------------DGSQERLLVEDSNLQAPTWS 398
               SP G  +A    +    A+ ++                S  R+   +   + PT+S
Sbjct: 88  SSSVSPDGTHMA-ASVTDGGAALAIVDLKNWKTQQLVSNAASSNPRISSNNVGQEGPTYS 146

Query: 399 PSGRSL---------IFSRKKDGD-TGSKLYSIDLNGRNETLINTPAYASDPQ 441
           P G+ L         +F+   DG  +  +  SI   G    L+   A+++D +
Sbjct: 147 PDGKQLWLGQPDGYTVFTVNADGSVSSPRTVSIPAQGSKHALVGAAAFSADGK 199



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 70/208 (33%), Gaps = 30/208 (14%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSESVVSGI 188
           V +  Q++    + +P   R + +     I  S     G       +        V    
Sbjct: 59  VTENGQVVSSNQYIAPYGDRLVINQ--GKIMSSSVSPDGTHMAASVTDGGAALAIVDLKN 116

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K    V +   +N R    S +     P +SP+ +++        D   V+ ++     
Sbjct: 117 WKTQQLVSNAASSNPRI--SSNNVGQEGPTYSPDGKQL---WLGQPDGYTVFTVNADGSV 171

Query: 249 APKRI------GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  R       G+  +++ A  FS++GK        +    + ++D  +   ++      
Sbjct: 172 SSPRTVSIPAQGSKHALVGAAAFSADGKTVY--SAVNGQNRVVAIDAATGTIKQ-----S 224

Query: 303 INISASYSPDSSQIV----FESDREGKE 326
            N+  +  P    IV    + S+  G+ 
Sbjct: 225 WNVGNA--PRGMVIVGNKLYVSNEGGRP 250


>gi|251798932|ref|YP_003013663.1| hypothetical protein Pjdr2_4966 [Paenibacillus sp. JDR-2]
 gi|247546558|gb|ACT03577.1| hypothetical protein Pjdr2_4966 [Paenibacillus sp. JDR-2]
          Length = 376

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/291 (14%), Positives = 89/291 (30%), Gaps = 35/291 (12%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN------IRYLTP 208
            H   D        +          V ++  +   +     MD D +N         +  
Sbjct: 60  IHRFEDASMDKWLSDDQVQLMYTKLVKQATATEEAQFEYNTMDVDLSNNEQKSAAEPVKN 119

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            +  +  +P  SP+ + V    + D+   R ++ +       +  G+         + ++
Sbjct: 120 VQTVVNEQP--SPDGKYVFVQQWKDKYTARNFIKEISTGNTIEIKGSNYLETGG--WLND 175

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
               L +       DI  +      T    +   +              F +   G+ ++
Sbjct: 176 TTYVLAAGSMSGLGDIRQIAADGTVTLLKLDDPALGDQP----------FVNFGVGQGRI 225

Query: 329 YVMQSNGSDQKRISQD--KEASYFDPV----WSPQGDLIAF-TKFSGEK--FAIGVMKKD 379
           Y   +N    K+ + D  K A           SP G  +A   +    K    + +   +
Sbjct: 226 YYTDNN-QTLKQFTPDDPKPAELVKHAMIFQVSPDGKHLAVEIQKQPGKAGSELRIFDSN 284

Query: 380 GSQERL-LVEDSNLQAPTWSPSGRSLI---FSRKKDGDTGSKLYSIDLNGR 426
           GS E L + +   +    WSP    L    ++  + G  G  ++     G+
Sbjct: 285 GSAEGLSIAKGDLIPYIAWSPDSSKLAAALYTENQSGMNGVYIFD-SATGK 334



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 13/119 (10%), Positives = 43/119 (36%), Gaps = 7/119 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--RFSSNGKRAL---I 274
           SP+ + +A             L     + + + +   +  ++ P   +S +  +      
Sbjct: 257 SPDGKHLAVEIQKQPGKAGSELRIFDSNGSAEGLSIAKGDLI-PYIAWSPDSSKLAAALY 315

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDREGKEQLYVMQ 332
           +  +     +Y  D  +     +  + F     S++P  +++ V  +D++     +++ 
Sbjct: 316 TENQSGMNGVYIFDSATGKVSPIGPSYFPQYPLSWNPSGTRLGVTVADKDSMPVTHIID 374



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 45/116 (38%), Gaps = 9/116 (7%)

Query: 265 FSSNGKRALISVQK--DEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIV--- 317
            S +GK   + +QK   +A     +   + + E L+     ++    ++SPDSS++    
Sbjct: 256 VSPDGKHLAVEIQKQPGKAGSELRIFDSNGSAEGLSIAKG-DLIPYIAWSPDSSKLAAAL 314

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +  ++ G   +Y+  S       I        +   W+P G  +  T    +   +
Sbjct: 315 YTENQSGMNGVYIFDSATGKVSPI-GPSYFPQYPLSWNPSGTRLGVTVADKDSMPV 369


>gi|119487847|ref|ZP_01621344.1| WD-repeat protein [Lyngbya sp. PCC 8106]
 gi|119455423|gb|EAW36561.1| WD-repeat protein [Lyngbya sp. PCC 8106]
          Length = 463

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 76/216 (35%), Gaps = 18/216 (8%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                ++    SPN Q +A A+YD +    + + +    +    +      I     S +
Sbjct: 57  GHSTWVYALAISPNNQYLASASYDGK----IKIWNLETGQLLHSLSGHTDAIETLVVSPD 112

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQ 327
             + L+S   D  + ++  +L++    R       ++ + + S D   +   S     + 
Sbjct: 113 -SKVLVSGGWDNRIRLW--NLETGELIRTLKGHIEDVKTLAISYDGKWLASGSV---DKT 166

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +   +    K ++          V++     +  +        I  +  DG + + + 
Sbjct: 167 IKLWNLSTGK-KHLTLKTSDWVRSIVFNSDTQTLV-SGSENGSVEIWSL-TDGKRLQTIT 223

Query: 388 -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                + +   SP G++L  +     D   KL+ ++
Sbjct: 224 AHSQAVWSVALSPDGQTLATAST---DKTIKLWDLN 256



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 14/163 (8%)

Query: 164 QSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFS 220
           + +T +  D+   I+F S++   VSG    S+ +    DG  ++ +T    Q ++    S
Sbjct: 177 KHLTLKTSDWVRSIVFNSDTQTLVSGSENGSVEIWSLTDGKRLQTITA-HSQAVWSVALS 235

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ Q +A A+ D      + L D    +  + +      +L+  FS + +          
Sbjct: 236 PDGQTLATASTDK----TIKLWDLNNLQLQQTLKGHSRAVLSLAFSPDSQTLA----SGG 287

Query: 281 AMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              I  +          +         S ++SPDS  +   S 
Sbjct: 288 YDKIIRLWNPKTGQQMSQWEGHKKPIWSVAFSPDSQILASGSS 330



 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 74/210 (35%), Gaps = 16/210 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG +  ++ + +           + D  +    F+ + Q +   + +      V +    
Sbjct: 160 SGSVDKTIKLWNLSTGKKHLTLKTSD-WVRSIVFNSDTQTLVSGSENG----SVEIWSLT 214

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
             +  + I      + +   S +G+    +   D+ + ++  DL +   ++ L       
Sbjct: 215 DGKRLQTITAHSQAVWSVALSPDGQTLA-TASTDKTIKLW--DLNNLQLQQTLKGHSRAV 271

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S ++SPDS  +         + + +       Q    +  +   +   +SP   ++A +
Sbjct: 272 LSLAFSPDSQTLA---SGGYDKIIRLWNPKTGQQMSQWEGHKKPIWSVAFSPDSQILA-S 327

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
             S E   +  +    S ER    ++ + A
Sbjct: 328 GSSDETVKLWEIS---SSERSPTNNTLISA 354



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 50/125 (40%), Gaps = 8/125 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ +     ++ + D +   ++       + +    FSP+ Q +A   YD      + L
Sbjct: 239 QTLATASTDKTIKLWDLNNLQLQQTLKGHSRAVLSLAFSPDSQTLASGGYDK----IIRL 294

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            + +  +   +    +  I +  FS +  + L S   DE + ++ +   S++    TN  
Sbjct: 295 WNPKTGQQMSQWEGHKKPIWSVAFSPD-SQILASGSSDETVKLWEI---SSSERSPTNNT 350

Query: 302 FINIS 306
            I+  
Sbjct: 351 LISAE 355


>gi|239981671|ref|ZP_04704195.1| putative protease [Streptomyces albus J1074]
          Length = 1116

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 83/259 (32%), Gaps = 33/259 (12%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAP 250
             +  RDG   R +  +       P        VAY T    D  +   YL      R  
Sbjct: 321 YWLTHRDG-PARTIADAPGVRTRLPEMLGAGGTVAYVTDAGGDDAVEIAYLPRATGGRPK 379

Query: 251 KRIGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           +R+   R   +L       G+R  ++        +  +D               +   + 
Sbjct: 380 RRLAGGRLGHVLEIVADPAGERIALASNDG---RLLLLDA---------TDPVGDTVLAP 427

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +P+  +           +  V+    +    + +       D  +SP G  + ++     
Sbjct: 428 APEGERA---------PEAEVVIEEEAPLTELVRSLNGPVRDLAFSPDGHWLTWSHPGIG 478

Query: 370 KF--AIGVMKKDGSQERLL-VEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +    I + +   +  +++ V D   +  +P ++  GR L F   +  D    +++ DL+
Sbjct: 479 RSLRQIRMARVTDADPQIVDVTDGRFEDESPVFTRDGRYLAFLSWRGFDPVYDVHTGDLS 538

Query: 425 ---GRNETLINTPAYASDP 440
              G    L+   +    P
Sbjct: 539 FPLGSRPYLVPLSSATPSP 557



 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 38/114 (33%), Gaps = 14/114 (12%)

Query: 270 KRALISVQKDEAMDIYSVDLQS------NATERLTNTLFINISASYSPDSSQIVFESDRE 323
            R     + D    ++  DL            R+T          +SPD SQ+ + S R 
Sbjct: 17  DRLCFVAEDD----LWLADLPGAGQAAPGRAWRMTADRTRLGLPRFSPDGSQVAYTSWRS 72

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD----LIAFTKFSGEKFAI 373
              ++++  + G   +R++           W P G      I      G+ F+ 
Sbjct: 73  LDPEIHLTPTGGGPVRRLTYWGNQDTRVRGWYPPGHESVGEIIAVSSHGQPFSY 126



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 66/198 (33%), Gaps = 25/198 (12%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YS 310
           R+   R+ +  PRFS +G +   +  +    +I+          RLT     +     + 
Sbjct: 45  RMTADRTRLGLPRFSPDGSQVAYTSWRSLDPEIHLTPTGGGPVRRLTYWGNQDTRVRGWY 104

Query: 311 PDSSQIV---FESDREGKEQLYVMQS-----NGSDQKRISQDKEASYFDPVWSPQGDL-- 360
           P   + V         G+   YV  +     +GS   ++           +    G    
Sbjct: 105 PPGHESVGEIIAVSSHGQPFSYVTWAYSLLTDGSPGSKLPWGPVTDLTVGLV--DGQYRT 162

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE--------DSNLQAPTWSPSGRSLIFSRKKDG 412
           +  T     + A     + G+Q RL +         D +L++P     GR + F    +G
Sbjct: 163 LLLTATPPHEPAYWKRYRGGAQGRLWLHGERLLPGLDGHLESPMI-VDGR-IAFLSDHEG 220

Query: 413 DTGSKLYSIDLNGRNETL 430
                LYS   +G +   
Sbjct: 221 --IGNLYSCAPDGTDLRR 236



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 26/215 (12%), Positives = 62/215 (28%), Gaps = 30/215 (13%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
             + +V+++     ++ +       G   R L   R   + E    P  +++A A+ D  
Sbjct: 351 GTVAYVTDAGGDDAVEIAYLPRATGGRPKRRLAGGRLGHVLEIVADPAGERIALASNDGR 410

Query: 235 ----------------------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
                                       ++        + + +    +    FS +G   
Sbjct: 411 LLLLDATDPVGDTVLAPAPEGERAPEAEVVIEEEAPLTELVRSLNGPVRDLAFSPDGHWL 470

Query: 273 LISVQKDE-AMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQL 328
             S      ++    +   ++A  ++   T+  F + S  ++ D   + F S R      
Sbjct: 471 TWSHPGIGRSLRQIRMARVTDADPQIVDVTDGRFEDESPVFTRDGRYLAFLSWRGFDPVY 530

Query: 329 YV----MQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            V    +      +  +     A+       P G 
Sbjct: 531 DVHTGDLSFPLGSRPYLVPLSSATPSPFALLPDGR 565



 Score = 36.9 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 21/53 (39%), Gaps = 2/53 (3%)

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           G   R+  + + L  P +SP G  + ++  +  D   +++     G     + 
Sbjct: 41  GRAWRMTADRTRLGLPRFSPDGSQVAYTSWRSLD--PEIHLTPTGGGPVRRLT 91


>gi|154494422|ref|ZP_02033742.1| hypothetical protein PARMER_03777 [Parabacteroides merdae ATCC
           43184]
 gi|154085866|gb|EDN84911.1| hypothetical protein PARMER_03777 [Parabacteroides merdae ATCC
           43184]
          Length = 724

 Score = 54.6 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 38/296 (12%), Positives = 78/296 (26%), Gaps = 55/296 (18%)

Query: 195 VMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRA 249
           V D D   N              P FSP+ + VAY +    +  +      +  T+    
Sbjct: 123 VYDYDVRRNYVKPISDSKGKQMIPTFSPDGRMVAYVSDNNIWIRKFDYDTEVQVTKDGEM 182

Query: 250 PKRIGNFRSMILA--------PRFSSNGKRALISVQKDEAMDIYSV-------------- 287
            K +      +            +S N ++       +  +  YS+              
Sbjct: 183 NKILNGITDWVYEEEFAVTNLMAWSPNSEQLAFVRFDESEVPEYSMQMFGEGLYPGYYNY 242

Query: 288 --DLQSNATERLTNTLFINIS--------A----SYSP-------DSSQIVFESDREGK- 325
                     ++T   +   +             SY P       D    V   +R    
Sbjct: 243 KYPKAGEKNSKVTLHSYDVTTKDTKELKVPVEADSYIPRIVFTNNDDQLAVMTLNRHQNV 302

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVW----SPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             +Y         + I +D+  +Y D  W        +  ++         I +    G 
Sbjct: 303 FNMYYANPKSGVFRLILRDENKAYVDSEWLNSIHFYANSFSYVNEQDGYAHIYLYSPTGV 362

Query: 382 QERLLVEDSNLQAPTWSPSG--RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +R + + +             +++ +   ++      +Y ID  G    L     
Sbjct: 363 MQRQVTKGNWDVTAFLGYDEATKTVYYESAEESPIRRAIYKIDAKGVKTKLSTQEG 418



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 55/143 (38%), Gaps = 27/143 (18%)

Query: 264 RFSSNGKRALIS------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             SS G   L+        ++    ++Y  D++ N  + ++++    +  ++SPD   + 
Sbjct: 97  TISSTGHHILVWRDTEPIYRRSFKANVYDYDVRRNYVKPISDSKGKQMIPTFSPDGRMVA 156

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEAS-----------------YFDPVWSPQGDL 360
           + SD      +++ + +   + ++++D E +                      WSP  + 
Sbjct: 157 YVSD----NNIWIRKFDYDTEVQVTKDGEMNKILNGITDWVYEEEFAVTNLMAWSPNSEQ 212

Query: 361 IAFTKFSGEKFAIGVMKKDGSQE 383
           +AF +F   +     M+  G   
Sbjct: 213 LAFVRFDESEVPEYSMQMFGEGL 235



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/175 (9%), Positives = 47/175 (26%), Gaps = 26/175 (14%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             ++ +  +   ++      ++TN           PD     + +  + +  +       
Sbjct: 19  AAQNGSKRVDLKEITDGQFRQVTNIG----EMRSMPDGEH--YTAMNDARNMIIKYSYRT 72

Query: 336 SDQKRISQDKEAS-------YFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQ 382
            +      + E +       +     S  G  I   +          K  +       + 
Sbjct: 73  GNPVDTLFNTEKARECTFDKFDGYTISSTGHHILVWRDTEPIYRRSFKANVYDYDVRRNY 132

Query: 383 ERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            + + +       PT+SP GR + +         + ++    +   E  +     
Sbjct: 133 VKPISDSKGKQMIPTFSPDGRMVAYVSD------NNIWIRKFDYDTEVQVTKDGE 181


>gi|291567150|dbj|BAI89422.1| WD-40 repeat protein [Arthrospira platensis NIES-39]
          Length = 580

 Score = 54.6 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 72/206 (34%), Gaps = 12/206 (5%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            +           +     S + + +A   +D      V L D       + +     ++
Sbjct: 372 FSPVQTMTGHHSPILAIAISSDGKTLASGGWDG----SVKLWDLPTGSLKQTLEGHSQLV 427

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
            A   S +GK    +  +D  + ++  +L++ A +R L       +S + SP+   +   
Sbjct: 428 GAIAISPDGKTLA-TGSRDRTIRLW--NLETGALKRTLEGHELSVLSLAISPNGEILASG 484

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S  +G   ++ +  NG   +R+S  ++  +   + S    LI  +    +   +  +   
Sbjct: 485 S-ADGTITIWKLD-NGQPIRRLSGHRDGVWSVAIASNNQTLI--SGSWDKTVKVWNLTSG 540

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
             +  L      + A   S     ++
Sbjct: 541 TIEANLEGHTGYVTAIAISSDQTMIL 566



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 64/188 (34%), Gaps = 9/188 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG    S+ + D    +++       Q++     SP+ + +A  + D      + L
Sbjct: 395 KTLASGGWDGSVKLWDLPTGSLKQTLEGHSQLVGAIAISPDGKTLATGSRDR----TIRL 450

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +       + +      +L+   S NG   L S   D  + I+ +D       RL+   
Sbjct: 451 WNLETGALKRTLEGHELSVLSLAISPNG-EILASGSADGTITIWKLD-NGQPIRRLSGHR 508

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S + + ++  ++  S     + + V        +   +           S    +I
Sbjct: 509 DGVWSVAIASNNQTLISGS---WDKTVKVWNLTSGTIEANLEGHTGYVTAIAISSDQTMI 565

Query: 362 AFTKFSGE 369
               + GE
Sbjct: 566 LSGDWDGE 573



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 66/214 (30%), Gaps = 25/214 (11%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN------ 292
           V + +       +              + NG++  I+  +D  + I+  DL +       
Sbjct: 316 VDIWNLATGGLRQSFRAHNREATRVLVTPNGQQL-ITAGEDGNIRIW--DLAAGLQAGSF 372

Query: 293 -ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              + +T      ++ + S D   +      +G  +L+         K+  +        
Sbjct: 373 SPVQTMTGHHSPILAIAISSDGKTLA-SGGWDGSVKLW--DLPTGSLKQTLEGHSQLVGA 429

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRK 409
              SP G  +A          I +   +    +  +E   L   +   SP+G  L     
Sbjct: 430 IAISPDGKTLATGSRDRT---IRLWNLETGALKRTLEGHELSVLSLAISPNGEILA---S 483

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              D    ++ +D NG+    ++      D  W 
Sbjct: 484 GSADGTITIWKLD-NGQPIRRLS---GHRDGVWS 513


>gi|327405866|ref|YP_004346704.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327321374|gb|AEA45866.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 687

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 77/261 (29%), Gaps = 58/261 (22%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTR--------------IDRAPKRIGNFRSMI 260
           + P  + + + + +    ++  + +Y                       PK I N  +  
Sbjct: 201 YFPTITVDGKTLLFTRRIEDKRVPIYGEQEDFYVSNLSTFNTWETAISMPKNI-NTLNNE 259

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA------TERL-------------TNTL 301
            AP    +G+  +     DE+   Y  + +         T+RL              NT 
Sbjct: 260 GAPTIGPDGRSLIFVACTDESGS-YGDNRKGKGSCDLFYTKRLGAQWLDPVNLPGAINTP 318

Query: 302 FINISASYSPDSSQIVFESD---REGKE--QLYVMQS--NGS--DQKRI--SQDKEASYF 350
                 S S D   + F      R G+    +Y      +GS     R+  + +      
Sbjct: 319 SWETQPSLSADGKTLYFIRKVMARGGRPDSDIYTATQKEDGSWDVPVRLPNTINTPYMEE 378

Query: 351 DPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQER--------LLVEDSNLQAPTWSP 399
             +  P G  + F+           I V + +   E          +   ++  +   S 
Sbjct: 379 SVLIHPDGKTLYFSSQGHRGMGGLDIFVSRMNEKGEWGIPENLGYPINTSADENSLLVSA 438

Query: 400 SGRSLIFSRKKDGDTG-SKLY 419
            G    F+  ++G  G   LY
Sbjct: 439 DGEIAFFASDREGGFGKLDLY 459


>gi|301307679|ref|ZP_07213636.1| putative dipeptidyl aminopeptidase IV [Bacteroides sp. 20_3]
 gi|300834353|gb|EFK64966.1| putative dipeptidyl aminopeptidase IV [Bacteroides sp. 20_3]
          Length = 733

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 101/322 (31%), Gaps = 82/322 (25%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDEDIL 237
           N++ ++  DG N      ++D I+                 +SP    +A+   D+  + 
Sbjct: 160 NNVHILSPDGRNTIVTRETQDGIVCGQAVHQREFGITKGMFWSPKGSALAFYRMDERMVT 219

Query: 238 RVYLMDTRI--------------------DRAPKRIGNFRSMILA---P--------RFS 266
              L++                            ++   +++ L    P         +S
Sbjct: 220 AYPLVNIDTRCATPVPHKYPMAGMKSHEVTVGVYQVATGQTVWLETGLPKEKYLTNIAWS 279

Query: 267 SNGKRALISVQKDEAMDIYSVD---LQSNATERL-TNTLFINISAS----YSP-DSSQIV 317
            + K   I+    E  +++ V    L       L T T    +       + P D  + +
Sbjct: 280 PDEKSIYIAELNREQNEMHLVRYSALTGKKEADLFTETDRCYVEPQHPVLFLPNDPDKFI 339

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---------KFSG 368
           ++S+ +G   LY+  + G + ++++  +        +S  G+ + F             G
Sbjct: 340 WQSEADGYNHLYLYDTTGKELRKLTGGEWVVTKVLGFSKDGNKVIFEGTAPHPVSPNMQG 399

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTW---------SPSGRS-LIFSRKKDGDTGSKL 418
                 + + D      L     +   +W         SPSG   + +           L
Sbjct: 400 TGMQRYIWETD------LRTGDIMNCLSWKVGVHRWLLSPSGEYAIDYVSSPSTPRDIDL 453

Query: 419 YSIDLNGRNETLINTPAYASDP 440
             I    ++  +I+T   A DP
Sbjct: 454 VCI----KDAKVISTLLSAPDP 471


>gi|188995160|ref|YP_001929412.1| putative OmpA family protein [Porphyromonas gingivalis ATCC 33277]
 gi|188594840|dbj|BAG33815.1| putative OmpA family protein [Porphyromonas gingivalis ATCC 33277]
          Length = 672

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 44/184 (23%)

Query: 304 NISASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKEASYFDPV------- 353
           +   +Y+PD+S + F S R   +G +   +     +D   I +D +  +  P        
Sbjct: 168 DFGPAYAPDASALYFTSSRSKDDGLDNSSITGLKPNDIYIIKRDAQGRWGRPDSVSGGIN 227

Query: 354 ---------WSPQGDLIAFT-KFSGEKFA--IGVMKKDGSQERLLVEDSNLQ-------- 393
                     +P G  I +T    G  +   + +     S E      S +         
Sbjct: 228 TPWDEGVPTITPDGSTIYYTLAQQGADYDRTVQIYSAARSGEGGWSNGSLVDIMRDSLRM 287

Query: 394 --APTWSPSGRSLIFSRKKDGDTGSK-LYSIDLN----GRNETL---INTPAYASDPQWV 443
              P+ S SG  L F     G  G K +Y + ++    G  E L   INTP     P   
Sbjct: 288 AAHPSMSASGDYLYFVSNIGGSYGGKDIYRVKVSDRSYGSPENLGPDINTPGDEMFP--- 344

Query: 444 GFMD 447
            F+D
Sbjct: 345 -FID 347



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 72/230 (31%), Gaps = 48/230 (20%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAM-------------DIYSV--DLQSNATERLTN 299
           N       P ++ +      +  + +               DIY +  D Q       + 
Sbjct: 163 NSARGDFGPAYAPDASALYFTSSRSKDDGLDNSSITGLKPNDIYIIKRDAQGRWGRPDSV 222

Query: 300 TLFINIS-----ASYSPDSSQIVFE-----SDREGKEQLYVMQSNG------SDQKRISQ 343
           +  IN        + +PD S I +      +D +   Q+Y    +G           I +
Sbjct: 223 SGGINTPWDEGVPTITPDGSTIYYTLAQQGADYDRTVQIYSAARSGEGGWSNGSLVDIMR 282

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKD----GSQERL---LVEDSNLQ 393
           D       P  S  GD + F    G  +    I  +K      GS E L   +    +  
Sbjct: 283 DSLRMAAHPSMSASGDYLYFVSNIGGSYGGKDIYRVKVSDRSYGSPENLGPDINTPGDEM 342

Query: 394 APTWSPSGRSLIFSRKKD--GDTGSKLY--SIDLNGRNETL-INTPAYAS 438
            P     G S +F       G  G  ++  ++D  GR   + +  P  +S
Sbjct: 343 FPFI--DGDSTLFFASDGHAGLGGLDIFKATLDSTGRWHVVNMGQPVNSS 390



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 49/142 (34%), Gaps = 38/142 (26%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKF-------------AIGVMKKD--GSQERL-- 385
            +     F P ++P    + FT    +                I ++K+D  G   R   
Sbjct: 162 WNSARGDFGPAYAPDASALYFTSSRSKDDGLDNSSITGLKPNDIYIIKRDAQGRWGRPDS 221

Query: 386 ----LVEDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYS--------------IDLN 424
               +    +   PT +P G ++ ++  + G   D   ++YS              +D+ 
Sbjct: 222 VSGGINTPWDEGVPTITPDGSTIYYTLAQQGADYDRTVQIYSAARSGEGGWSNGSLVDIM 281

Query: 425 GRNETLINTPAYASDPQWVGFM 446
             +  +   P+ ++   ++ F+
Sbjct: 282 RDSLRMAAHPSMSASGDYLYFV 303


>gi|156405200|ref|XP_001640620.1| predicted protein [Nematostella vectensis]
 gi|156227755|gb|EDO48557.1| predicted protein [Nematostella vectensis]
          Length = 552

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 7/124 (5%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +   +FS +G+R   +  KD  + I+  V ++      L    +     ++SPD   ++ 
Sbjct: 259 VWFAKFSHDGRRLA-TGAKDGNIIIWEVVGMEPKLLRTLEGHSYGVAFLAWSPDDVYVIA 317

Query: 319 ESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
               +   +L++      D K R+SQ  + S     W+P G    +T  +  +F      
Sbjct: 318 CGPED-CSELWIWNVETGDLKCRMSQSPDDSLTCCAWNPDGKRF-YTGGTRGQF--YQCD 373

Query: 378 KDGS 381
            DG+
Sbjct: 374 LDGN 377



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 76/209 (36%), Gaps = 25/209 (11%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I+Y        ++  +FS + +++A    D      + + +  +   PK +         
Sbjct: 248 IKYTLTEHCDEVWFAKFSHDGRRLATGAKDG----NIIIWEV-VGMEPKLLRTLEGHSYG 302

Query: 263 P---RFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN-ISASYSPDSSQIV 317
                +S +    +I+   ++  +++  ++++   + R++ +   +    +++PD  +  
Sbjct: 303 VAFLAWSPD-DVYVIACGPEDCSELWIWNVETGDLKCRMSQSPDDSLTCCAWNPDGKRFY 361

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLI--AFTKFSGEKFAIG 374
               R    Q Y    +G+    +    E    + ++    G  +  A T      +   
Sbjct: 362 TGGTRG---QFYQCDLDGN----VLDSWEGVRVNALYCLDDGKTVLAADTHMRLRSYNF- 413

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
              +D     +L ED  + + + S  GR 
Sbjct: 414 ---EDLHDSNVLQEDHPIMSFSVSDDGRR 439


>gi|62089360|dbj|BAD93124.1| WD repeat domain 26 variant [Homo sapiens]
          Length = 725

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 412 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 471

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 472 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 530

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 531 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 579

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 580 --DLTDRNIVQEDHPIMSFTISKNGR 603


>gi|315126621|ref|YP_004068624.1| peptidase [Pseudoalteromonas sp. SM9913]
 gi|315015135|gb|ADT68473.1| putative peptidase [Pseudoalteromonas sp. SM9913]
          Length = 833

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 74/198 (37%), Gaps = 16/198 (8%)

Query: 253 IGNFRSMILAP-RFSSNGKRALISVQKDEAMDIY--SVDLQSNAT---ERLTNTLFINIS 306
           + +      +P  ++ +G +  I ++  +  D +  +VD ++N      RL +  +I  +
Sbjct: 372 VISDWGWDQSPISWNDDGSQVAIMLEAWDNKDRWLATVDFENNKLVSQHRLHDDAWIAYA 431

Query: 307 AS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +   +  DS+ + + S+  G  QLY    NG     ++Q +     D   +     I +
Sbjct: 432 FNDFGWLNDSTTLYYLSEESGYSQLYKKPLNG-KATALTQGQF-EVSDLTLTDDNSAIYY 489

Query: 364 TKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                    + I  +         + + + +   T SP    L+  R       ++LY  
Sbjct: 490 KANIEHPGLYEIYRVNPQTGVSEQVTDLNGMTDYTLSPDQSKLL-LRHSKITMPTELYVA 548

Query: 422 D--LNGRNETLINTPAYA 437
           +   N     L NT + A
Sbjct: 549 EAKANTTATRLTNTVSDA 566



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/126 (11%), Positives = 43/126 (34%), Gaps = 12/126 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALIS 275
           +S +   V YA       LR         +  +++   +   +      FS++       
Sbjct: 79  WSADSSTVIYARKQQGSELRDLFTQAVNAQTAEQVALNQLHSVGSSKAVFSNDKSLQAYV 138

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            + +    I+  +++S   +++T +        +  D + + +   R+G    + +    
Sbjct: 139 FEGN----IFIKNVKSGVIKQITQSSATESKPQFLNDGN-LAY---RQGN-IFFKVDLTT 189

Query: 336 SDQKRI 341
              + I
Sbjct: 190 GLTREI 195


>gi|311265295|ref|XP_003130584.1| PREDICTED: WD repeat-containing protein 26-like isoform 1 [Sus
           scrofa]
          Length = 660

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 347 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 406

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 407 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 465

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 466 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 514

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 515 --DLTDRNIVQEDHPIMSFTISKNGR 538


>gi|296229987|ref|XP_002760516.1| PREDICTED: WD repeat-containing protein 26 [Callithrix jacchus]
          Length = 642

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 329 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 388

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 389 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 447

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 448 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 496

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 497 --DLTDRNIVQEDHPIMSFTISKNGR 520


>gi|195181472|ref|XP_002029170.1| GL15634 [Drosophila persimilis]
 gi|194112804|gb|EDW34847.1| GL15634 [Drosophila persimilis]
          Length = 364

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 72/205 (35%), Gaps = 22/205 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S    ++   +SP    VA A +D      V + + ++             + +    
Sbjct: 7   FGSHSSAVYGVAWSPKGNLVASAGHDR----SVKIWEPKVRGVSGEFAAHSKPVRSIDVD 62

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESDR 322
             G+  L +   D+++ I+ V     A  +  ++     +    A +SP+   I   SD 
Sbjct: 63  PTGQMML-TASDDKSVKIWRV-----AKRQFLSSFSQQTNWVRAAKFSPNGKMIATVSD- 115

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              + L +   N  +  R   ++  +     W P G+++A          I +    GSQ
Sbjct: 116 --DKSLRIYDVNTGECTRTITEERGAPRQVAWHPWGNMVAVALGCN---RIKIFDVGGSQ 170

Query: 383 ERLL--VEDSNLQAPTWSPSGRSLI 405
              L  V  + +    +  SG  L+
Sbjct: 171 LLQLYVVHSAPVNDVAFHSSGNFLL 195



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 16/188 (8%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P  Q +  A+ D      V +      +         + + A +FS NGK    +V  D+
Sbjct: 63  PTGQMMLTASDDK----SVKIWRVAKRQFLSSFSQQTNWVRAAKFSPNGKMIA-TVSDDK 117

Query: 281 AMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++ IY  D+ +    R +T         ++ P  + +       G  ++ +    GS   
Sbjct: 118 SLRIY--DVNTGECTRTITEERGAPRQVAWHPWGNMVAVA---LGCNRIKIFDVGGSQLL 172

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLV-EDSNLQAPTW 397
           ++     A   D  +   G+ +       +   I V+   +G     L    + + A  +
Sbjct: 173 QLYVVHSAPVNDVAFHSSGNFLL---SGSDDCTIRVLDLLEGRPIYTLTGHTAAVNAVGF 229

Query: 398 SPSGRSLI 405
           S  G    
Sbjct: 230 SQDGEKFA 237



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 62/182 (34%), Gaps = 22/182 (12%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISAS 308
           R G+  S +    +S  G     S   D ++ I+   ++  + E   ++     I++  +
Sbjct: 6   RFGSHSSAVYGVAWSPKGNLVA-SAGHDRSVKIWEPKVRGVSGEFAAHSKPVRSIDVDPT 64

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFS 367
                  ++  SD +   +++ +      Q   S  ++ ++     +SP G +IA     
Sbjct: 65  ----GQMMLTASD-DKSVKIWRVA---KRQFLSSFSQQTNWVRAAKFSPNGKMIATVS-D 115

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR--------KKDGDTGSKLY 419
            +   I  +        +  E    +   W P G  +  +            G    +LY
Sbjct: 116 DKSLRIYDVNTGECTRTITEERGAPRQVAWHPWGNMVAVALGCNRIKIFDVGGSQLLQLY 175

Query: 420 SI 421
            +
Sbjct: 176 VV 177



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 11/152 (7%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +   +FSPN + +A  + D    LR+Y  D       + I   R       +   G  
Sbjct: 96  NWVRAAKFSPNGKMIATVSDD--KSLRIY--DVNTGECTRTITEERGAPRQVAWHPWGNM 151

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             +++       I   D+  +   +L           ++    + ++  SD      + V
Sbjct: 152 VAVAL---GCNRIKIFDVGGSQLLQLYVVHSAPVNDVAFHSSGNFLLSGSD---DCTIRV 205

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +               A+     +S  G+  A
Sbjct: 206 LDLLEGRPIYTLTGHTAAVNAVGFSQDGEKFA 237


>gi|124004158|ref|ZP_01689004.1| immunogenic 75 kDa protein PG4 [Microscilla marina ATCC 23134]
 gi|123990228|gb|EAY29727.1| immunogenic 75 kDa protein PG4 [Microscilla marina ATCC 23134]
          Length = 660

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 63/227 (27%), Gaps = 30/227 (13%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
                AY      D                 I +      +P F+ NG   + +   ++ 
Sbjct: 187 KGNGAAYLGIYAHDFNHPTKFTGEAKLYEDDIHHETEHDASPTFARNGSFMIFARSGNKK 246

Query: 282 MDIYSVDL-------QS--NATERL--TNTLFINISASYSPDSSQIVFESDR---EGKEQ 327
               + DL              E L  ++    +   S SPD  ++ F SDR    G   
Sbjct: 247 KGRRTTDLFISRRQADGTWGEAELLEISSDKAWDACPSISPDGKRLYFSSDRKGGAGGND 306

Query: 328 LYVMQSNGS----DQKRISQDKEASYFDPVWSPQGDLIAFTKFSG----EKFAIGVMKKD 379
           ++V     S      + + +    ++ +           +   +G        + V  + 
Sbjct: 307 IWVANLTSSGRAYGVRNVGRQINTNHSEKFPYVDNKGKLYFSSTGHWGLGGLDLFVATRR 366

Query: 380 GSQERLLVEDSNLQAPT------WSPSGRSLIFSRKK-DGDTGSKLY 419
             +  +        +P       ++       FS  +  G  G  +Y
Sbjct: 367 NGKVEVKNMGVPFNSPADDFGIIYNTDSTG-YFSSDREGGKGGDDIY 412



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 62/204 (30%), Gaps = 25/204 (12%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD--- 199
           KF      +    H  ++          G F   I   S +   G     L +  R    
Sbjct: 206 KFTGEAKLYEDDIHHETEHDASPTFARNGSFM--IFARSGNKKKGRRTTDLFISRRQADG 263

Query: 200 --GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKR 252
             G        S       P  SP+ +++ +++         DI    L  +      + 
Sbjct: 264 TWGEAELLEISSDKAWDACPSISPDGKRLYFSSDRKGGAGGNDIWVANLTSSGRAYGVRN 323

Query: 253 IGNFRSMILAPRFSS--NGK-RALISVQKD---EAMDIYSVDLQSNATE-----RLTNTL 301
           +G   +   + +F    + K +   S         +D++    ++   E        N+ 
Sbjct: 324 VGRQINTNHSEKF-PYVDNKGKLYFSSTGHWGLGGLDLFVATRRNGKVEVKNMGVPFNSP 382

Query: 302 FINISASYSPDSSQIVFESDREGK 325
             +    Y+ D S   F SDREG 
Sbjct: 383 ADDFGIIYNTD-STGYFSSDREGG 405


>gi|327538352|gb|EGF25025.1| Serine/threonine protein kinase-related protein [Rhodopirellula
            baltica WH47]
          Length = 1922

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 85/284 (29%), Gaps = 39/284 (13%)

Query: 171  GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            G  + R+  V   +  G    ++ + D D                    S +   +A  +
Sbjct: 1324 GAMSMRMDPVHRRLFLGNADATVRIWDIDRGTELGSVRGTGLNDVM-AVSKDGSLLATGS 1382

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSV 287
               E  + V+ +D   + +P+ +         + A   S + +    S  +     ++  
Sbjct: 1383 SSTESDVLVWKLDPSKEVSPRLLHRLNGHEESVAALAISPDSQWL-FSGDRAGRGRVW-- 1439

Query: 288  DLQSNATERLTNTLFINI-------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            DLQ+           I+        +AS++ DS  +   SD +   +        +D+  
Sbjct: 1440 DLQTGEPV----GEPIDDLLGFRMNTASFAGDSKSVWVGSDNQSLMRWRWSDRTWADR-- 1493

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMKKD-GSQERLLVEDSNLQAP 395
               D      + V SP G        S         +       G Q+RLL E  +    
Sbjct: 1494 --HDTNGFVMNLVVSPDGRQAITIDQSKRTDRTISNVTWWDLSNGKQQRLLSETFSNDQ- 1550

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                       +    G       +   +GR   L+ TPA    
Sbjct: 1551 -----------TSAFGGRPNFGGAAFSTDGRLARLVVTPAGGRS 1583



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 83/272 (30%), Gaps = 48/272 (17%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             DG +  + T + D  ++  RFSP+  KV  ++ D     RV  +D    R   R+    
Sbjct: 1249 ADGLDA-FETAAHDDEIWSARFSPDGTKVVTSSRD--HTARVLSIDPDTSRFVTRLTISS 1305

Query: 258  SM-----------------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLT 298
                                ++ R     +R  +    D  + I+ +D  +   +     
Sbjct: 1306 DQSSSEEDGGTLEEGSAFGAMSMRMDPVHRRLFL-GNADATVRIWDIDRGTELGSVR--- 1361

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQL-YVMQSNGSDQKRISQ---DKEASYFDPVW 354
                +N   + S D S +   S     + L + +  +     R+       E S      
Sbjct: 1362 -GTGLNDVMAVSKDGSLLATGSSSTESDVLVWKLDPSKEVSPRLLHRLNGHEESVAALAI 1420

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSR 408
            SP    +     +G      V      +        LL     +   +++   +S+    
Sbjct: 1421 SPDSQWLFSGDRAGRG---RVWDLQTGEPVGEPIDDLL--GFRMNTASFAGDSKSVWVGS 1475

Query: 409  KKDG----DTGSKLYS--IDLNGRNETLINTP 434
                        + ++   D NG    L+ +P
Sbjct: 1476 DNQSLMRWRWSDRTWADRHDTNGFVMNLVVSP 1507



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 36/311 (11%), Positives = 89/311 (28%), Gaps = 80/311 (25%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIG---------- 254
               +  +     SP+ ++          D  I  V   D    +  + +           
Sbjct: 1494 HDTNGFVMNLVVSPDGRQAITIDQSKRTDRTISNVTWWDLSNGKQQRLLSETFSNDQTSA 1553

Query: 255  -NFRSMILAPRFSSNGK--RALISVQKDEAMDIYSVDLQS--NATERL------------ 297
               R       FS++G+  R +++     +  + + DL       +R+            
Sbjct: 1554 FGGRPNFGGAAFSTDGRLARLVVTPAGGRSSRVETWDLSGNVGTAKRVAAVELPERIGEC 1613

Query: 298  TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS---------NGSDQKRIS------ 342
            T    +      +   +   F  D +    L   ++          G D++ I+      
Sbjct: 1614 TAVASLQGDRFVTMHGN-AAFRWDGDSNTHLMSYRAHGAVTRATFAGGDRRVITASRSVK 1672

Query: 343  --------------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                             E +      SP+      T     +  +    ++    + + +
Sbjct: 1673 VWDAETGKTVGKLESPHEGTVRAIAISPKETFRLVTGGDDSRVHVWDFDEETGSFQSVRQ 1732

Query: 389  ------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPA------ 435
                     + +  +SP G  L+ +  +   T      + ++G+    L+  P+      
Sbjct: 1733 WNDPILQGGIASLDFSPDGSCLLATTNQGAAT-----LMRMDGKATLNLVADPSLGKLNV 1787

Query: 436  --YASDPQWVG 444
              +++D +WV 
Sbjct: 1788 GRFSNDSRWVA 1798


>gi|311265293|ref|XP_003130585.1| PREDICTED: WD repeat-containing protein 26-like isoform 2 [Sus
           scrofa]
          Length = 644

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 331 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 390

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 391 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 449

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 450 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 498

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 499 --DLTDRNIVQEDHPIMSFTISKNGR 522


>gi|264681556|ref|NP_001108585.2| WD repeat-containing protein 26 isoform b [Homo sapiens]
 gi|332812033|ref|XP_003308819.1| PREDICTED: WD repeat-containing protein 26 isoform 2 [Pan
           troglodytes]
          Length = 645

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 332 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 391

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 392 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 450

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 451 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 499

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 500 --DLTDRNIVQEDHPIMSFTISKNGR 523


>gi|239944424|ref|ZP_04696361.1| WD-40 repeat-containing protein [Streptomyces roseosporus NRRL
           15998]
          Length = 1267

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 53/325 (16%), Positives = 107/325 (32%), Gaps = 47/325 (14%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV---IKEGKDRLRVEFRLWDVKDR 136
            ++ +D    + T     P      + GA++  +GR        ++R  +  RL D++  
Sbjct: 634 EVVVRDLATGRPTGASPGP-----ANAGAEMGASGRTLITYNTSENRYGI--RLQDMRSG 686

Query: 137 KQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           K+++  +    P A+   +  +++D     +            F   +V +     +LCV
Sbjct: 687 KELLTLREKRDPRAAVPPVVQSLADVNRLLVEERVPAAMEDGAFPDATVSADDRHLALCV 746

Query: 196 MDRDGANIRYLTPSRDQILFEPR---------------FSPNQQKVAYATYDDEDILRVY 240
               G  ++    +  + L  P                F+P+ + +A  T      +R++
Sbjct: 747 P---GKPLQVWDVAERRRLSTPWAPQATADQCLEESVHFTPDGRHLALTT---GSGVRIW 800

Query: 241 LMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            + T  +R   R  + R +  +         +G   L+   +     +    L       
Sbjct: 801 AIATGRERPEIRHTDLRRVTFSADGEFLVGEDGTEILLWRLRSADYPVLRYRLSGGTVTD 860

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L             PD   I + S  E      V   +          +   +   V+SP
Sbjct: 861 L----------RVDPDEGWIRYLSGPEDSWGTEVHTLDLGRVGTARW-RNRPFMSTVFSP 909

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGS 381
            G LIA T  S +   + +   DG 
Sbjct: 910 DGALIATTHLSADDRTVHIRTMDGR 934


>gi|194227311|ref|XP_001489885.2| PREDICTED: similar to WD repeat-containing protein 26 (CUL4- and
           DDB1-associated WDR protein 2) (Myocardial ischemic
           preconditioning up-regulated protein 2) [Equus caballus]
          Length = 615

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 302 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 361

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 362 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 420

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 421 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 469

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 470 --DLTDRNIVQEDHPIMSFTISKNGR 493


>gi|149923728|ref|ZP_01912122.1| Peptidase C14, caspase catalytic subunit p20 [Plesiocystis pacifica
           SIR-1]
 gi|149815412|gb|EDM74952.1| Peptidase C14, caspase catalytic subunit p20 [Plesiocystis pacifica
           SIR-1]
          Length = 1224

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 90/237 (37%), Gaps = 26/237 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +       Q ++   F+P+ +++  +++D        +M        + +   R+ ILA
Sbjct: 745 EQRTLREHQQGVWGLAFTPDGERLVTSSFDG----TARIMSADGVGPRQVLKGHRAGILA 800

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF----INISASYSPDSSQIVF 318
            R  ++G+    +   D  +  + ++        L         +++ A           
Sbjct: 801 MRVDASGRWLA-TGSWDSEVRTWDLERPVRELA-LEEHQGAVQSVDVEA-----GGARAV 853

Query: 319 ESDREGKEQLYVMQSNGSDQK---RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
               +G+ +L+ ++      +   R   D+ A +    + P+G  IA  + +G    I +
Sbjct: 854 TVGSDGQARLWRLEDGVELARHDERAYYDEPAYFNVARFGPRGRRIALGRSNG---EIRL 910

Query: 376 MKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
               DG   RL      ++   +SP G  L+ S   DG+  ++L++    G +  ++
Sbjct: 911 WSPEDGGIVRLDAHRRGIRELQFSPDGERLL-STSSDGE--ARLWAT-ATGESRAVL 963



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/305 (15%), Positives = 88/305 (28%), Gaps = 27/305 (8%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--- 161
           SL A VLV G      + R     R W+    + +  ++        R  A    D    
Sbjct: 371 SLSAAVLVGGSAWGREQVRDNARQRYWNALTEQLLEVERERG-FRQARDDAERAEDAAKL 429

Query: 162 -IYQSITGEKGDFNSR----ILFVSESVVSGIIKNSLCVMDRDGANIRYLTP----SRDQ 212
            +Y+S   E    + R       +   V      + L     + +  R L+         
Sbjct: 430 SVYRSYGDELEVVSERDPTIAAVLLREVGEQGRASELWRSAANASLGRPLSHAVLRGHSD 489

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +++   FSP  Q +    Y      RV                   ++     S +G R 
Sbjct: 490 VVWSLAFSPTGQAL----YSGGRDGRVQGWSVASGDGATLFEREVGVVGL-ALSPDGARL 544

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQIVFESDREGKEQLY 329
            ++        ++S+ +     E L           S  + P    +V    R+G  +++
Sbjct: 545 AVAYADG---SVWSLAVAGGEAEALLEPDPREAGERSLCFDPRGRGLV-VGGRDGTSRVF 600

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
               +G+ +   +  +  +         G     +  S     +     D   E L +E 
Sbjct: 601 GADPSGALEPEPTLLEGHTAAVRALDFDGQGRMLSASSDGSVRLW--DLDSGAETLRLEG 658

Query: 390 SNLQA 394
                
Sbjct: 659 HEDDV 663



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 17/178 (9%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-- 295
            V L D        R+      +   RF   G+  +++   D  +  +S   ++      
Sbjct: 641 SVRLWDLDSGAETLRLEGHEDDVFHARFL--GRGWVVAGGDDGMVHFWSAPPEARGRVEQ 698

Query: 296 -RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDKEASY 349
            +L+      I+A  +   S+    +D  G+ +L ++ + GS   R+      ++ +   
Sbjct: 699 AQLSIESSNQITA-LAVSGSRFA-SADSSGELRLGILAAEGSSAPRLEEQRTLREHQQGV 756

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--GRSLI 405
           +   ++P G+ +  + F G      +M  DG   R +++              GR L 
Sbjct: 757 WGLAFTPDGERLVTSSFDGTA---RIMSADGVGPRQVLKGHRAGILAMRVDASGRWLA 811



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/208 (12%), Positives = 64/208 (30%), Gaps = 17/208 (8%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            ++G +        E +V+     +  +M  DG   R +       +   R   + + +A
Sbjct: 752 HQQGVWGLAFTPDGERLVTSSFDGTARIMSADGVGPRQVLKGHRAGILAMRVDASGRWLA 811

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             ++D E    V   D         +   +  + +    + G R  ++V  D    ++ +
Sbjct: 812 TGSWDSE----VRTWDLERPVRELALEEHQGAVQSVDVEAGGAR-AVTVGSDGQARLWRL 866

Query: 288 DLQSNATERLTNTLFINISA------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           +       R  +               + P   +I          ++ +         R+
Sbjct: 867 E-DGVELARH-DERAYYDEPAYFNVARFGPRGRRIALGRS---NGEIRLWSPEDGGIVRL 921

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGE 369
              +     +  +SP G+ +  T   GE
Sbjct: 922 DAHRRG-IRELQFSPDGERLLSTSSDGE 948



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 60/202 (29%), Gaps = 8/202 (3%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             E   +  R       V +      L                 +  +     S +  ++A
Sbjct: 966  HEGVVYAGRFDVGGVHVYTAAEDGVLRRWHARTGAEEAAFSGHEGAIRALALSADGGRIA 1025

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                   D   + L          R+      +L+  F ++  R ++S   D ++ ++S 
Sbjct: 1026 ----TGGDDHELRLWRRDQPEDSLRLAGHTQPVLSVAFDADATR-VVSASADGSVRVWST 1080

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                     L       + A +  D+ +++  +  +G  +L+ +   G  Q  + +  +A
Sbjct: 1081 -ASGEGLHLLEGHDGRVLGAVFV-DAERVLSHAY-DGSVRLWQLGPGGEAQAIVLRGHDA 1137

Query: 348  SYFDPVWSPQGDLIAFTKFSGE 369
                    P G  +      G 
Sbjct: 1138 PVLSLGLGPAGRRVVTGAEDGS 1159


>gi|264681558|ref|NP_079436.4| WD repeat-containing protein 26 isoform a [Homo sapiens]
 gi|332812031|ref|XP_003308818.1| PREDICTED: WD repeat-containing protein 26 isoform 1 [Pan
           troglodytes]
 gi|134047967|sp|Q9H7D7|WDR26_HUMAN RecName: Full=WD repeat-containing protein 26; AltName: Full=CUL4-
           and DDB1-associated WDR protein 2; AltName:
           Full=Myocardial ischemic preconditioning up-regulated
           protein 2
 gi|168278016|dbj|BAG10986.1| WD repeat protein 26 [synthetic construct]
          Length = 661

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 348 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 407

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 408 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 466

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 467 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 515

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 516 --DLTDRNIVQEDHPIMSFTISKNGR 539


>gi|119590126|gb|EAW69720.1| WD repeat domain 26, isoform CRA_a [Homo sapiens]
          Length = 661

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 348 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 407

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 408 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 466

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 467 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 515

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 516 --DLTDRNIVQEDHPIMSFTISKNGR 539


>gi|116004337|ref|NP_001070527.1| WD repeat-containing protein 26 [Bos taurus]
 gi|83638741|gb|AAI09898.1| WD repeat domain 26 [Bos taurus]
 gi|296479291|gb|DAA21406.1| WD repeat domain 26 [Bos taurus]
          Length = 514

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 201 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 260

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 261 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 319

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 320 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 368

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 369 --DLTDRNIVQEDHPIMSFTISKNGR 392


>gi|297280693|ref|XP_002801964.1| PREDICTED: WD repeat-containing protein 26-like [Macaca mulatta]
 gi|332251961|ref|XP_003275120.1| PREDICTED: WD repeat-containing protein 26 isoform 1 [Nomascus
           leucogenys]
 gi|34539784|gb|AAQ74770.1| WD40 repeat protein 26 [Homo sapiens]
 gi|55931014|gb|AAH52301.2| WD repeat domain 26 [Homo sapiens]
 gi|117574236|gb|ABK41102.1| CDW2/WDR26 [Homo sapiens]
 gi|119590129|gb|EAW69723.1| WD repeat domain 26, isoform CRA_d [Homo sapiens]
          Length = 514

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 201 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 260

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 261 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 319

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 320 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 368

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 369 --DLTDRNIVQEDHPIMSFTISKNGR 392


>gi|70985056|ref|XP_748034.1| small nucleolar ribonucleoprotein complex subunit (Pwp2), putative
           [Aspergillus fumigatus Af293]
 gi|66845662|gb|EAL85996.1| small nucleolar ribonucleoprotein complex subunit (Pwp2), putative
           [Aspergillus fumigatus Af293]
 gi|159126042|gb|EDP51158.1| small nucleolar ribonucleoprotein complex subunit (Pwp2), putative
           [Aspergillus fumigatus A1163]
          Length = 926

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 90/237 (37%), Gaps = 23/237 (9%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D   I  L+ S+  I F    + + + +A+ +     +L V+   +      K+ G+  
Sbjct: 307 PDFNPIHQLSVSQSNIDFV-TVNKSGEWLAFGSSKHGQLL-VWEWQSE-SYILKQQGHLD 363

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQI 316
           SM  A  +S +G++ + +   D  + ++  D++S       T       +  ++   S +
Sbjct: 364 SMN-ALAYSPDGQKIV-TAADDGKVKVW--DVKSGFCIVTFTEHSSGVTACKFAKKGS-V 418

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +F +  +G  + + +     + +  +     S+      P G++I     S + F I V 
Sbjct: 419 LFTASLDGSVRAWDL-IRYRNFRTFTAPSRTSFTSLAVDPSGEVI--CAGSPDSFDIHVW 475

Query: 377 KKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                  +LL + S  + P     ++  G  L       G     +    + GR +T
Sbjct: 476 SVQTG--QLLDQLSGHEGPVSSLAFAADGNHLA-----SGSWDRTVRVWSIFGRTQT 525


>gi|301774056|ref|XP_002922448.1| PREDICTED: WD repeat-containing protein 26-like, partial
           [Ailuropoda melanoleuca]
          Length = 547

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 234 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 293

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 294 AWSPDDSYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 352

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 353 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 401

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 402 --DLTDRNIVQEDHPIMSFTISKNGR 425


>gi|194033585|ref|XP_001927805.1| PREDICTED: WD repeat-containing protein 38-like [Sus scrofa]
          Length = 312

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 56/173 (32%), Gaps = 13/173 (7%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            R  + +  FS +G+R L +  +D  +  +          +L           +SPD   
Sbjct: 20  HRGEVNSSTFSPDGQRLL-TASEDGCVYGWETQ-SGRLLWKLGGHTGPVKFCRFSPDGRL 77

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
               S       + +      +  ++ +  + S     +SP    +A   +        V
Sbjct: 78  FASTSS---DCTIRLWDVAKVECLQVLKGHQRSVETVSFSPDSKQLASGGWDKRVMLWEV 134

Query: 376 MKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               G   R LV   + +Q+  ++PS   L       G   S +   DL G  
Sbjct: 135 QS--GQVLRHLVGHRDSIQSSDFAPSSDCLA-----TGSWDSTIRMWDLRGGT 180



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 62/165 (37%), Gaps = 14/165 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q++  A+ D      VY  +T+  R   ++G     +   RFS +G R   S  
Sbjct: 28  TFSPDGQRLLTASEDG----CVYGWETQSGRLLWKLGGHTGPVKFCRFSPDG-RLFASTS 82

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + ++  D+      ++      ++   S+SPDS Q+         +++ + +    
Sbjct: 83  SDCTIRLW--DVAKVECLQVLKGHQRSVETVSFSPDSKQLA---SGGWDKRVMLWEVQSG 137

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              R       S     ++P  D +A   +      I +    G 
Sbjct: 138 QVLRHLVGHRDSIQSSDFAPSSDCLATGSWDST---IRMWDLRGG 179



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 65/204 (31%), Gaps = 14/204 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +        +   RFSP+ +  A  + D      + L D       + +   +  +    
Sbjct: 57  WKLGGHTGPVKFCRFSPDGRLFASTSSD----CTIRLWDVAKVECLQVLKGHQRSVETVS 112

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS + K+   S   D+ + ++ V         L        S+ ++P S  +   S    
Sbjct: 113 FSPDSKQLA-SGGWDKRVMLWEVQ-SGQVLRHLVGHRDSIQSSDFAPSSDCLATGS---W 167

Query: 325 KEQLYVMQSNGSDQK---RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              + +    G       +  +    +     +S  G L+A   +  +   I        
Sbjct: 168 DSTIRMWDLRGGTGAIFHQELEGHRGNISCLCFSAFG-LLASGSWD-KTIHIWKPSTRSL 225

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
             +L    + +++  +SP G  L 
Sbjct: 226 LVQLKGHVTWVKSIAFSPDGLQLA 249



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 5/119 (4%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +Q + G +G+ +         + SG    ++ +      ++          +    FSP+
Sbjct: 185 HQELEGHRGNISCLCFSAFGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPD 244

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
             ++A A Y       V + D    R    +     +  +  F+ +GK  L+S   D+A
Sbjct: 245 GLQLASAGYSH----TVKVWDCNTGRCTDTLKGVLDVAHSCAFTPDGK-LLVSGTADQA 298


>gi|42491248|dbj|BAD10987.1| saponin hydrolase precursor [Neocosmospora vasinfecta var.
           vasinfecta]
          Length = 638

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 57/162 (35%), Gaps = 22/162 (13%)

Query: 265 FSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           F+ +G          E    D+++V LQ+    RLTN        ++SPD+  +     R
Sbjct: 296 FNGDGTELTYVGSNIESCNNDVFAVHLQTGVVRRLTNHPEYPDPLAFSPDNKWMAVMDTR 355

Query: 323 EGKEQLYV---------MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                +++         +   G      S++     F   +     L+ F    G+ +  
Sbjct: 356 GSGRNMFIAGMRGIPPLVDIVGGILPASSRNNGLRRFFQPY-----LLDFYGDRGDYYG- 409

Query: 374 GVMKKD-----GSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
             +  D     GS      E + +  P WSP  R L+F +  
Sbjct: 410 QKINGDNNGVPGSGAINDPEWNGMADPRWSPDSRQLVFWQTH 451



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 49/155 (31%), Gaps = 13/155 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+ +  ++ Y   + E                +R+ N         FS + K   +   +
Sbjct: 296 FNGDGTELTYVGSNIESCNNDVFAVHLQTGVVRRLTNHPEYPDPLAFSPDNKWMAVMDTR 355

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------SDREGKEQLYVM 331
               +++   ++      L + +   + AS   +  +  F+        DR G      +
Sbjct: 356 GSGRNMFIAGMRG--IPPLVDIVGGILPASSRNNGLRRFFQPYLLDFYGDR-GDYYGQKI 412

Query: 332 QSNGSDQKR---ISQDKEASYFDPVWSPQGDLIAF 363
             + +       I+  +     DP WSP    + F
Sbjct: 413 NGDNNGVPGSGAINDPEWNGMADPRWSPDSRQLVF 447


>gi|211828661|gb|AAH63817.2| WDR26 protein [Homo sapiens]
          Length = 413

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 100 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 159

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 160 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 218

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 219 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 267

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 268 --DLTDRNIVQEDHPIMSFTISKNGR 291


>gi|73961497|ref|XP_537237.2| PREDICTED: similar to WD-repeat protein 26 [Canis familiaris]
          Length = 720

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 407 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 466

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 467 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 525

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 526 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 574

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 575 --DLTDRNIVQEDHPIMSFTISKNGR 598


>gi|298372620|ref|ZP_06982610.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275524|gb|EFI17075.1| OmpA family protein [Bacteroidetes oral taxon 274 str. F0058]
          Length = 681

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 75/213 (35%), Gaps = 45/213 (21%)

Query: 255 NFRSMILAPRF--SSNGKRALISVQKDEAMDIYSVDLQSN--------------ATERLT 298
           N +S   +P F  S+ G+  + +  +D +      D+                   E+ +
Sbjct: 184 NKKSSDFSPSFVGSA-GESLVFTSNRDVSKKQKKSDITGKLNFDMYIAKKNKADRWEKPS 242

Query: 299 NTLFINIS-----ASYSPDSSQIVFESD------REGKEQLYVMQSNG--SDQKRISQDK 345
               +N+S      S++ D   I F         R G   +   +S G  ++ + ++  K
Sbjct: 243 YFKELNVSEDDGVCSFTADGRTIFFTRSMAEGEHRGGTSIMTSTRSGGEWTEPRIVTTFK 302

Query: 346 EAS--YFDPVWSPQGDLIAFTK-FSGEKF---AIGVMKKDGSQERL-------LVEDSNL 392
           +++     P  SP G  + F   + G+ F    I V +K G    +       +    N 
Sbjct: 303 DSTIMVGHPAISPDGQSLYFVSDYRGQSFGGKDIFVCQKIGGSWSVPENLGDRINTTGNE 362

Query: 393 QAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLN 424
             P  +  G  L F+     G  G  +YS   +
Sbjct: 363 MFPYVATDGT-LYFASDGHQGFGGLDIYSARKD 394



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 60/179 (33%), Gaps = 25/179 (13%)

Query: 174 NSRILFVSESVVSGIIK--NSLCVMDRDGAN---IRYLTPSRDQILF--EPRFSPNQQKV 226
           + R +F + S+  G  +   S+    R G      R +T  +D  +    P  SP+ Q +
Sbjct: 261 DGRTIFFTRSMAEGEHRGGTSIMTSTRSGGEWTEPRIVTTFKDSTIMVGHPAISPDGQSL 320

Query: 227 AYATYDDEDIL-----RVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQK 278
            + +             V          P+ +G   N     + P  +++G     +   
Sbjct: 321 YFVSDYRGQSFGGKDIFVCQKIGGSWSVPENLGDRINTTGNEMFPYVATDGT-LYFASDG 379

Query: 279 D---EAMDIYSV--DLQSNATER----LTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                 +DIYS   D       R      N+   +   ++  D +   F S+R   + +
Sbjct: 380 HQGFGGLDIYSARKDSIGRWVVRNMLAPMNSPNDDFGITFKGDEANGFFSSNRGNTKNV 438


>gi|284054091|ref|ZP_06384301.1| WD-40 repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 870

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 78/200 (39%), Gaps = 14/200 (7%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D ++     E+  ++  I+   +++ +   + S+ +  RDG  +        Q++ +  F
Sbjct: 684 DLVFTFSAHEEEIWDL-IIREQDTIATSSTRGSIKLWRRDGT-LLNEFVGHTQVVKKIAF 741

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  ++A  + D      V L D           + +  + A  FS +G+  + +   +
Sbjct: 742 SPDGNRLASVSDDG----TVKLWDI-TGELLADFEHSQEPVEALAFSPDGQYLV-AGGHN 795

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             + ++S++    +   L        + ++SPD + I   S     + + +   +G   +
Sbjct: 796 RELKLWSIN--ERSAIVLGKHDNSIRTVAFSPDGNIIASGS---WDQTIRLWSPDGRHLQ 850

Query: 340 RISQDKEASYFDPVWSPQGD 359
                  A      +SP G+
Sbjct: 851 TFVSHT-APLTQLAFSPDGE 869



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 46/142 (32%), Gaps = 33/142 (23%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDR 322
            FS +G R   SV  D  + ++ +   +             + A ++SPD   +V     
Sbjct: 740 AFSPDGNRLA-SVSDDGTVKLWDI---TGELLADFEHSQEPVEALAFSPDGQYLV----A 791

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G  +   + S       +    + S     +SP G++IA   +                
Sbjct: 792 GGHNRELKLWSINERSAIVLGKHDNSIRTVAFSPDGNIIASGSWDQT------------- 838

Query: 383 ERLLVEDSNLQAPTWSPSGRSL 404
            RL           WSP GR L
Sbjct: 839 IRL-----------WSPDGRHL 849



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/274 (16%), Positives = 99/274 (36%), Gaps = 47/274 (17%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA----TYDDEDILRVYLMDTRI 246
           NS+ +    G N  +    ++  ++   +S + +++A      + D +   ++   + +I
Sbjct: 577 NSVLIQSVYGMNEYHSFGRQEDRVWSLDWSKDGEQIAIITRTNSQDVDRRDKIIAENNQI 636

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               +R    + + + P F+   +            D Y     SN   R+ +    ++ 
Sbjct: 637 MIFNRR---GKLLNIIPNFAYELRTIAF------FPDGYIATGHSNGEIRIWSNEG-DLV 686

Query: 307 ASYSPD-----------SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            ++S                I   S R     + + + +G+         +       +S
Sbjct: 687 FTFSAHEEEIWDLIIREQDTIATSSTRG---SIKLWRRDGTLLNEFVGHTQV-VKKIAFS 742

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKD 411
           P G+ +A     G    + +    G    LL +  + Q P     +SP G+ L+      
Sbjct: 743 PDGNRLASVSDDGT---VKLWDITGE---LLADFEHSQEPVEALAFSPDGQYLV---AGG 793

Query: 412 GDTGSKLYSID-----LNGRNETLINTPAYASDP 440
            +   KL+SI+     + G+++  I T A++ D 
Sbjct: 794 HNRELKLWSINERSAIVLGKHDNSIRTVAFSPDG 827



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 47/125 (37%), Gaps = 17/125 (13%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---VWSPQGDLIAFT 364
           ++SPD +++   SD +G  +L+     G     +  D E S        +SP G  +   
Sbjct: 740 AFSPDGNRLASVSD-DGTVKLW--DITGE----LLADFEHSQEPVEALAFSPDGQYLV-A 791

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                +  +  +  + S   L   D++++   +SP G  +       G     +     +
Sbjct: 792 GGHNRELKLWSIN-ERSAIVLGKHDNSIRTVAFSPDGNIIA-----SGSWDQTIRLWSPD 845

Query: 425 GRNET 429
           GR+  
Sbjct: 846 GRHLQ 850


>gi|281338566|gb|EFB14150.1| hypothetical protein PANDA_011419 [Ailuropoda melanoleuca]
          Length = 506

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 201 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 260

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 261 AWSPDDSYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 319

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 320 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 368

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 369 --DLTDRNIVQEDHPIMSFTISKNGR 392


>gi|157818723|ref|NP_001102551.1| WD repeat-containing protein 26 [Rattus norvegicus]
 gi|149040896|gb|EDL94853.1| similar to myocardial ischemic preconditioning upregulated protein
           2 (predicted) [Rattus norvegicus]
          Length = 514

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 201 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIVWQVDADTHLLKLLKTLEGHAYGVSYI 260

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 261 AWSPDDSYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 319

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 320 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 368

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 369 --DLTDRNIVQEDHPIMSFTISKNGR 392


>gi|91200562|emb|CAJ73611.1| hypothetical protein kuste2859 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 386

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 79/196 (40%), Gaps = 21/196 (10%)

Query: 191 NSLCVMDRDGANIRYL------TPSRDQILFEPRFS---PNQQKVAYATYDDEDILRVYL 241
           ++L + ++ G ++ ++            +  +P  S   P+   + Y    + D + V  
Sbjct: 59  STLFISNQSGHSVTFVDARTQKVTGEVAVRVQPEASAVTPDGAFL-YVCNAESDSVSVVD 117

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +  + +    ++G++ S I   + S +GK A ++        I  +D  +   E++ +  
Sbjct: 118 IQRKQEIKEIKVGDWPSGI---KISPDGKTAYVACSGCMWNAIDVID--TGRMEKVRSIY 172

Query: 302 FINISAS---YSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             +        SPD   +V   D  G   +   ++  ++G   +     + ++  D V++
Sbjct: 173 TSDYGPRMVEISPDGKTLVAILDTVGSINRSVDFIDIASGRVVENRVIHESSNLRDVVYT 232

Query: 356 PQGDLIAFTKFSGEKF 371
           P G  IA T  + + +
Sbjct: 233 PDGKYIAVTHQTPKNW 248



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 69/206 (33%), Gaps = 13/206 (6%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           F    SP+   +      ++    V  +D R  +    +   R    A   + +G    +
Sbjct: 50  FHITMSPDGSTLF---ISNQSGHSVTFVDARTQKVTGEVA-VRVQPEASAVTPDGAFLYV 105

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQS 333
              + +++    VD+Q     +             SPD     + +        + V+ +
Sbjct: 106 CNAESDSVS--VVDIQRKQEIKEIKVGDWPSGIKISPDGKT-AYVACSGCMWNAIDVIDT 162

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGE-KFAIGVMKKDGSQE---RLLVE 388
              ++ R     +        SP G  L+A     G    ++  +     +    R++ E
Sbjct: 163 GRMEKVRSIYTSDYGPRMVEISPDGKTLVAILDTVGSINRSVDFIDIASGRVVENRVIHE 222

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDT 414
            SNL+   ++P G+ +  + +   + 
Sbjct: 223 SSNLRDVVYTPDGKYIAVTHQTPKNW 248


>gi|194387698|dbj|BAG61262.1| unnamed protein product [Homo sapiens]
          Length = 451

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 138 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 197

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 198 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 256

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 257 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 305

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 306 --DLTDRNIVQEDHPIMSFTISKNGR 329


>gi|119590130|gb|EAW69724.1| WD repeat domain 26, isoform CRA_e [Homo sapiens]
          Length = 451

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 138 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 197

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 198 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 256

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 257 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 305

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 306 --DLTDRNIVQEDHPIMSFTISKNGR 329


>gi|10764839|gb|AAG22830.1|AF306867_1 unknown [Ochlerotatus triseriatus]
          Length = 177

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 10/178 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S   K SL  ++  G   + L P   +      +SP+ + +A    D      + + D 
Sbjct: 9   GSHEGKISLYSVES-GKPEQVLDPQNGKFTLSIAYSPDGKYIASGGIDG----IINIFDV 63

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  + +      + +  FS +  + L++   D  M +Y V   S+    L+      
Sbjct: 64  AAGKVAQTLEGHAMSVRSLCFSPD-SQMLLTASDDGHMKLYDV-AHSDVVGTLSGHSSWV 121

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +S S+S D       S     + + +             D +   +   +SP    + 
Sbjct: 122 LSVSFSGDGKSFASSSS---DKTVKIWNVAERQCLHTFSDHQDQVWGVKYSPDSSKVI 176



 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 59/156 (37%), Gaps = 8/156 (5%)

Query: 164 QSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           Q +  + G F   I +  +   + SG I   + + D     +          +    FSP
Sbjct: 27  QVLDPQNGKFTLSIAYSPDGKYIASGGIDGIINIFDVAAGKVAQTLEGHAMSVRSLCFSP 86

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + Q +  A+ D      + L D         +    S +L+  FS +GK    S   D+ 
Sbjct: 87  DSQMLLTASDDG----HMKLYDVAHSDVVGTLSGHSSWVLSVSFSGDGKSFA-SSSSDKT 141

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           + I++V  +       ++         YSPDSS+++
Sbjct: 142 VKIWNV-AERQCLHTFSDHQDQVWGVKYSPDSSKVI 176



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 34/98 (34%), Gaps = 9/98 (9%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           ++ +        +++   +   +     +SP G  IA     G    I +      +   
Sbjct: 14  KISLYSVESGKPEQVLDPQNGKFTLSIAYSPDGKYIASGGIDG---IINIFDVAAGKVAQ 70

Query: 386 LVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
            +E   +   +  +SP  + L+ +     D   KLY +
Sbjct: 71  TLEGHAMSVRSLCFSPDSQMLLTASD---DGHMKLYDV 105


>gi|332251963|ref|XP_003275121.1| PREDICTED: WD repeat-containing protein 26 isoform 2 [Nomascus
           leucogenys]
 gi|37900894|gb|AAO67709.1| myocardial ischemic preconditioning upregulated protein 2 [Homo
           sapiens]
          Length = 498

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 185 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 244

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 245 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 303

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 304 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 352

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 353 --DLTDRNIVQEDHPIMSFTISKNGR 376


>gi|34783428|gb|AAH31471.2| WDR26 protein [Homo sapiens]
          Length = 373

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 60  QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 119

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 120 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 178

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 179 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 227

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 228 --DLTDRNIVQEDHPIMSFTISKNGR 251


>gi|296534441|ref|ZP_06896879.1| 40-residue YVTN beta-propeller [Roseomonas cervicalis ATCC 49957]
 gi|296265232|gb|EFH11419.1| 40-residue YVTN beta-propeller [Roseomonas cervicalis ATCC 49957]
          Length = 337

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 60/154 (38%), Gaps = 9/154 (5%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +P  +  G+  L+ V      +I  +D  +    R    L      + +PD S ++   D
Sbjct: 29  SPAAAPAGEGDLVFVLNSGEANILVLDAATRQERRRIPVLREVHHLALTPDGSTLM-VGD 87

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               E L++    G   KR   +  ++ +   +SP G  +  T    ++  I     DG+
Sbjct: 88  SGANEMLFLNPLTGELIKR---EPLSNPYHLGFSPDGRTLVITSLRRDQVDIY--GWDGT 142

Query: 382 QERLLVEDSNLQAPT---WSPSGRSLIFSRKKDG 412
              L    S    P+   +SP  +++  + + +G
Sbjct: 143 ALTLRKRHSMPDMPSHLAFSPDSKTVYVTLQGNG 176



 Score = 43.5 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 81/227 (35%), Gaps = 37/227 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +   +    D + +Y  D       KR  +   M     FS + K   +++Q 
Sbjct: 117 FSPDGRTLVITSLR-RDQVDIYGWDGTALTLRKR-HSMPDMPSHLAFSPDSKTVYVTLQG 174

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYS----PDSSQIVFESDR-----EGKEQLY 329
           +  +   S++                +   +S    P+ + +++  DR      G + + 
Sbjct: 175 NGLLAAISLET---------------LEPLWSMEIGPEPAGVIWHKDRLLVGIMGGDYVA 219

Query: 330 VMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLV 387
           V      S ++RI+  + A        P+ D+I  T     +  I ++     +  R L 
Sbjct: 220 VADPATQSIERRITIGRGA--HALFMGPKNDIIYATSRVDSR--ISLIDATTLEVVRSLR 275

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                   T+ P GR  I++  +      ++  ID       +I T 
Sbjct: 276 IPGGPDDLTFDPQGR--IWATLR---WVGRVAVIDPESGRSEVIRTG 317


>gi|283786550|ref|YP_003366415.1| oligogalacturonate lyase [Citrobacter rodentium ICC168]
 gi|282950004|emb|CBG89632.1| oligogalacturonate lyase [Citrobacter rodentium ICC168]
          Length = 391

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/237 (11%), Positives = 65/237 (27%), Gaps = 43/237 (18%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQ 277
           ++P      +  +  +      L           I   +  +  P +   +        +
Sbjct: 149 WTPLNDWQIFHDFFHKGPHCRLLRVDLKTGDSAVIHEEKIWLGHPIYRPFDDHTVAFCHE 208

Query: 278 KDEA---MDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYV 330
                    ++ V+   +   ++ +           + PD S +V+ S  +G++   +  
Sbjct: 209 GPHDLIDARMWLVNEDGSNIRKVKDHAEGESCTHEFWVPDGSALVYVSYLKGQQGRTISR 268

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--------------------------FT 364
              +    + I      S+    +   G L+                           F 
Sbjct: 269 YNPDSGMNEDIMPMPACSHLMSNF--DGTLLVGDGSGTPVDVKDTGGYTIDNDPYLYGFD 326

Query: 365 KFSGEKFAIGVMK---KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                 F I          +  R +        P+++P  R+++FS  KDG     +
Sbjct: 327 VAKKGYFRIARHDTSWATVANSRQVTHP----HPSFTPDDRAVLFSSDKDGKPAIYI 379



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 71/210 (33%), Gaps = 22/210 (10%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           P  +   R+      F ++G   L + + D   + Y +D+      +LT     N    +
Sbjct: 28  PPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHWNYYLLDIAKAEAVQLTEGAGDNTFGGF 87

Query: 310 -SPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPV------------- 353
            SPD S + +  +     ++ +      +  R+        ++                 
Sbjct: 88  LSPDDSALYYVKNDRTLYEVNLHTLAEREVYRVPEEWVGYGTWVANSDCTKLVGIEIAKS 147

Query: 354 -WSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSP-SGRSLIFSR 408
            W+P  D   F  F  +     +++ D   G    +  E   L  P + P    ++ F  
Sbjct: 148 DWTPLNDWQIFHDFFHKGPHCRLLRVDLKTGDSAVIHEEKIWLGHPIYRPFDDHTVAFCH 207

Query: 409 KKDGDT-GSKLYSIDLNGRNETLINTPAYA 437
           +   D   ++++ ++ +G N   +   A  
Sbjct: 208 EGPHDLIDARMWLVNEDGSNIRKVKDHAEG 237



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 78/251 (31%), Gaps = 29/251 (11%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++  F  +   + +A   D      YL+D     A +              S +   
Sbjct: 36  NYFYQKCFFNDGSHLLFAGEFDGH-WNYYLLDIAKAEAVQLTEGAGDNTFGGFLSPDDSA 94

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL----------------TNTLFINISAS-YSPDSS 314
                      ++    L      R+                T  + I I+ S ++P + 
Sbjct: 95  LYYVKNDRTLYEVNLHTLAEREVYRVPEEWVGYGTWVANSDCTKLVGIEIAKSDWTPLND 154

Query: 315 QIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF 371
             +F          +L  +     D   I ++K      P++ P     +AF        
Sbjct: 155 WQIFHDFFHKGPHCRLLRVDLKTGDSAVIHEEKIW-LGHPIYRPFDDHTVAFCHEGPHDL 213

Query: 372 ---AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN- 424
               + ++ +DGS  R +    E  +     W P G +L++     G  G  +   + + 
Sbjct: 214 IDARMWLVNEDGSNIRKVKDHAEGESCTHEFWVPDGSALVYVSYLKGQQGRTISRYNPDS 273

Query: 425 GRNETLINTPA 435
           G NE ++  PA
Sbjct: 274 GMNEDIMPMPA 284



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 68/212 (32%), Gaps = 31/212 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYAT 230
            F+   +         +I   + +++ DG+NIR +    +        + P+   + Y +
Sbjct: 197 PFDDHTVAFCHEGPHDLIDARMWLVNEDGSNIRKVKDHAEGESCTHEFWVPDGSALVYVS 256

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           Y      R            + I    +   L   F  +G   +     D +     VD+
Sbjct: 257 YLKGQQGRTISRYNPDSGMNEDIMPMPACSHLMSNF--DGTLLV----GDGSGTP--VDV 308

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ---SNGSDQKRISQDKE 346
           +       T    I+             F+  ++G  ++       +  ++ ++++    
Sbjct: 309 KD------TGGYTIDNDPYLYG------FDVAKKGYFRIARHDTSWATVANSRQVTHP-- 354

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                P ++P    + F+     K AI + K 
Sbjct: 355 ----HPSFTPDDRAVLFSSDKDGKPAIYIAKL 382



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 33/97 (34%), Gaps = 6/97 (6%)

Query: 288 DLQSN-ATERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           D  +     RLT               +  D S ++F  + +G    Y++    ++  ++
Sbjct: 16  DPDTGVEITRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHWNYYLLDIAKAEAVQL 75

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           ++    + F    SP    + + K     + + +   
Sbjct: 76  TEGAGDNTFGGFLSPDDSALYYVKNDRTLYEVNLHTL 112


>gi|264681550|ref|NP_663489.4| WD repeat-containing protein 26 [Mus musculus]
          Length = 641

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 328 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 387

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 388 AWSPDDSYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 446

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 447 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRVRGYNFE---- 495

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 496 --DLTDRNIVQEDHPIMSFTISKNGR 519


>gi|134047968|sp|Q8C6G8|WDR26_MOUSE RecName: Full=WD repeat-containing protein 26
          Length = 641

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 328 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 387

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 388 AWSPDDSYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 446

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 447 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRVRGYNFE---- 495

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 496 --DLTDRNIVQEDHPIMSFTISKNGR 519


>gi|88704700|ref|ZP_01102413.1| Prolyl oligopeptidase family [Congregibacter litoralis KT71]
 gi|88701021|gb|EAQ98127.1| Prolyl oligopeptidase family [Congregibacter litoralis KT71]
          Length = 771

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 67/177 (37%), Gaps = 32/177 (18%)

Query: 209 SRDQILFEPRFSPNQQKVAYATY--DDEDILRVYLMDTRID------------------R 248
           SR    F   +  + Q + + +   D   + R+  +                       +
Sbjct: 333 SRIYTGFASAWDADGQNIVFLSDLDDRYGLYRINALSMEESSKEALEDASEESLGESLEK 392

Query: 249 APKRIGNFRSMIL-APRFSSNGKRALISVQKDEAM--DIYSVDLQSNATERLTNT----- 300
           +P+ + + R  +L AP+ +++G + + +     A    ++ V       ERLT       
Sbjct: 393 SPRLLSDPRMDVLSAPQITASG-QIIYAANAPSAAESQVFRVGPDDGTPERLTQPTQITQ 451

Query: 301 -LFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
               N     SPD   + F  S+     +LY + + G D +R++  + A++ +  W+
Sbjct: 452 LPGYNT-PYPSPDGKHLAFLHSEAARPPELYSVATAGGDAQRVTHSQGAAFSEQTWA 507



 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 83/283 (29%), Gaps = 73/283 (25%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMD---------------TRIDRAPKRIG----NFRS 258
            +SP+   +A    D   + +V   D                      +++G    +   
Sbjct: 217 AWSPDSGTIAVHLVDRRHLPKVPFPDYLSPETSPNEIRRAYPGDANESRQVGLINVSSGK 276

Query: 259 MILAPRFSSNGKRAL-ISVQKDE------------AMDIYSVD-------LQSNATERLT 298
           M L P  S   ++ +  S   D                +Y VD         S+   R+ 
Sbjct: 277 MQLLPLESPKARQVIGFSWSVDGVLLVDIASDTAEDRWLYRVDDMQLETIWHSHRESRIY 336

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------------------- 337
                    ++  D   IVF SD + +  LY + +   +                     
Sbjct: 337 TGFAS----AWDADGQNIVFLSDLDDRYGLYRINALSMEESSKEALEDASEESLGESLEK 392

Query: 338 -QKRISQDKEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--- 392
             + +S  +      P  +  G +I A    S  +  +  +  D      L + + +   
Sbjct: 393 SPRLLSDPRMDVLSAPQITASGQIIYAANAPSAAESQVFRVGPDDGTPERLTQPTQITQL 452

Query: 393 ---QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                P  SP G+ L F   +      +LYS+   G +   + 
Sbjct: 453 PGYNTPYPSPDGKHLAFLHSEAARP-PELYSVATAGGDAQRVT 494



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 81/239 (33%), Gaps = 40/239 (16%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALI 274
           P+++P+ Q  A++  D+    R   + +      + +    +        +  + +  L+
Sbjct: 65  PKWAPDSQHFAFSWNDEGLPERGLWLASADGEELEELQLPEASDALSDFIWHGDSQALLV 124

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +      +++ + +   +++RL        +   +PD S++ F  + +    L++    
Sbjct: 125 VL----GSELWQLSISDRSSQRLGVLGKGASNLGLAPDGSKVAFLKEGD----LWIFDLE 176

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
               + +S    A             ++  +++  +  IG                    
Sbjct: 177 SKTSQALSNVGIAGLSA---------LSIGRYNRPEREIG--------------PGIWGG 213

Query: 395 PT--WSPSGRSLIFSRKKDGDTGSKL----YSIDLNGRNETLINTPAYASDPQWVGFMD 447
           PT  WSP   ++      D     K+    Y       NE     P  A++ + VG ++
Sbjct: 214 PTYAWSPDSGTIA-VHLVDRRHLPKVPFPDYLSPETSPNEIRRAYPGDANESRQVGLIN 271


>gi|116749059|ref|YP_845746.1| hypothetical protein Sfum_1624 [Syntrophobacter fumaroxidans MPOB]
 gi|116698123|gb|ABK17311.1| hypothetical protein Sfum_1624 [Syntrophobacter fumaroxidans MPOB]
          Length = 646

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 36/186 (19%)

Query: 263 PRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLFINISA------SYSPD-- 312
           P  S +G   L + +++  ++  I+ +D        +++     +S        Y  D  
Sbjct: 91  PAVSFDGSHILFAGKRNKEDSWQIWRMDKDGGNKHLISSGPGDRVSPLYVGSLFYLDDKA 150

Query: 313 -SSQIVFESDREGKEQ---------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            + QI +     G  +         LY    +GS  +RI+ +   S FDP   P G L+ 
Sbjct: 151 PTEQICYVGTEHGWIEGRGKAPTLALYAANMDGSKARRIAYNPF-SDFDPDVLPDGRLVY 209

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-SLIFSRKKDGDTGSKLYSI 421
            ++   E          GS  R + +   +        G  ++ ++   +  +  ++  +
Sbjct: 210 SSRQPTEP---------GSGMREMTQLFAVNI-----DGSDAMAYAGDSEPPSHMEMARV 255

Query: 422 DLNGRN 427
           D  G  
Sbjct: 256 DWKGSR 261



 Score = 43.1 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 39/267 (14%), Positives = 69/267 (25%), Gaps = 52/267 (19%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-------------PR--F 219
           S ILF  +          +  MD+DG N   ++      +               P    
Sbjct: 98  SHILFAGKRNKEDSW--QIWRMDKDGGNKHLISSGPGDRVSPLYVGSLFYLDDKAPTEQI 155

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                +  +     +                +RI         P    +G R + S ++ 
Sbjct: 156 CYVGTEHGWIEGRGKAPTLALYAANMDGSKARRIAYNPFSDFDPDVLPDG-RLVYSSRQP 214

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                       +    +T    +NI  S       + +  D E    +        +  
Sbjct: 215 TEP--------GSGMREMTQLFAVNIDGS-----DAMAYAGDSEPPSHM--------EMA 253

Query: 340 RISQDKEASYF----DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           R+       YF       W P G  +AF        +  V+  +        E     +P
Sbjct: 254 RVDWKGSRVYFIESRVHTW-PGGGALAFVSQRRPYHSRAVLGAN--------EKGFFHSP 304

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSID 422
              P G  L+  R         ++ ID
Sbjct: 305 CPLPDGGLLVSHRANRPGAVFGIHRID 331



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 13/95 (13%)

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +    F G + A+ V         L  E  + + P  S  G  ++F+ K++ +   
Sbjct: 62  DGCRVVRLSFRGSR-AVAVP--------LTKEFVSARDPAVSFDGSHILFAGKRNKEDSW 112

Query: 417 KLYSIDLNGRNETLINT-PAYASDPQWVG---FMD 447
           +++ +D +G N+ LI++ P     P +VG   ++D
Sbjct: 113 QIWRMDKDGGNKHLISSGPGDRVSPLYVGSLFYLD 147


>gi|37677038|ref|NP_937434.1| oligogalacturonate lyase [Vibrio vulnificus YJ016]
 gi|37201583|dbj|BAC97404.1| oligogalacturonate lyase [Vibrio vulnificus YJ016]
          Length = 388

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 64/190 (33%), Gaps = 32/190 (16%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG+N+R + + +  +      + P+   +AY +
Sbjct: 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNLRKIKSHAPGESCTHEFWIPDGSAMAYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---------------I 274
           Y      R +Y  +       + +       L   F  +G   +                
Sbjct: 257 YFKGQTERVIYKANPDTLENEEVMVMPPCSHLMSNF--DGSLMVGDGCDAPVDVADASGY 314

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLF-----------INISASYSPDSSQIVFESDRE 323
           S++ D    +Y ++       +L                 +   S++P+   ++F SD E
Sbjct: 315 SIEND--PFLYVLNTNKKTYAKLAKHSSSWKVLDGDRQITHPHPSFTPNDEGVLFTSDFE 372

Query: 324 GKEQLYVMQS 333
           G   +Y+   
Sbjct: 373 GVPAIYIADV 382



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 68/200 (34%), Gaps = 30/200 (15%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDRE 323
           F+ +G++ L +   D   + Y +DL +    +LT     N    + S D     +  +  
Sbjct: 43  FTQDGQKLLFAGDFDGNRNYYLLDLNTQQAVQLTEGKGDNTFGGFISSDDKSFFYVKNEL 102

Query: 324 GKEQLYVMQSNGSDQKRIS-----QDKEASYFDPV--------------WSPQGDLIAFT 364
               L  +     ++  I           ++                  W P      F 
Sbjct: 103 ---NLMKVDLETLEETVIYTVDEEWKGYGTWVANSECTKLVGIEILKRDWQPLTSWEKFA 159

Query: 365 KFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLY 419
           +F        ++K D   G  E +  E++ L  P + P    ++ F  +   D   ++++
Sbjct: 160 EFYHTNPRCRLIKVDIESGELEVIHQENAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMW 219

Query: 420 SIDLNGRNETLI--NTPAYA 437
            ++ +G N   I  + P  +
Sbjct: 220 LVNEDGSNLRKIKSHAPGES 239



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 91/274 (33%), Gaps = 40/274 (14%)

Query: 196 MDRDGANIRYLTPSRDQIL-----FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           +D D           D I      ++  F+ + QK+ +A  D +     YL+D    +A 
Sbjct: 15  VDSDTQVKVTRLTPTDVICHRNYFYQKCFTQDGQKLLFAG-DFDGNRNYYLLDLNTQQAV 73

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL------------- 297
           +              SS+ K           +++  VDL++     +             
Sbjct: 74  QLTEGKGDNTFGGFISSDDKSFFYVKN---ELNLMKVDLETLEETVIYTVDEEWKGYGTW 130

Query: 298 ------TNTLFINI-SASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEAS 348
                 T  + I I    + P +S   F        +  L  +     + + I Q+  A 
Sbjct: 131 VANSECTKLVGIEILKRDWQPLTSWEKFAEFYHTNPRCRLIKVDIESGELEVIHQE-NAW 189

Query: 349 YFDPVWSP-QGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSG 401
              P++ P     + F            + ++ +DGS  R +   +  ++ T   W P G
Sbjct: 190 LGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNLRKIKSHAPGESCTHEFWIPDG 249

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTP 434
            ++ +     G T   +Y  + +   NE ++  P
Sbjct: 250 SAMAYVSYFKGQTERVIYKANPDTLENEEVMVMP 283


>gi|10437006|dbj|BAB14955.1| unnamed protein product [Homo sapiens]
          Length = 367

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 54  QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 113

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 114 AWSPDDNYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 172

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 173 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFE---- 221

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 222 --DLTDRNIVQEDHPIMSFTISKNGR 245


>gi|228948069|ref|ZP_04110353.1| TolB domain protein [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228811427|gb|EEM57764.1| TolB domain protein [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
          Length = 410

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 88/244 (36%), Gaps = 43/244 (17%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY   + ++ L +Y +     +
Sbjct: 35  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSYDGEWLAYVKGEKQNTLELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K++  F S +   ++S               +  + V+ ++   E ++  +      +
Sbjct: 86  DGKKVTPFHSEVSNYQWSPTENIIAFIFT--GTLHTFKVEKKNADFENVSAGVGDY---A 140

Query: 309 YSPDSSQIVFESDREGKEQLYV------------MQSNGSDQKRISQDKEASY-----FD 351
           + P+  + +  S+       +             M  +         ++  ++       
Sbjct: 141 WYPNGKKFLVSSEAHLLPTGWTGAQLYEVQKDAHMNPHKMKHLYALPNEHDNFLALVASG 200

Query: 352 PVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWSPSGR 402
             WSP    I+F       +S +   + +++ DGS+     ++L+     +   W+P+  
Sbjct: 201 FQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK---WAPANN 257

Query: 403 SLIF 406
            L +
Sbjct: 258 ILAY 261



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 10/87 (11%)

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  IAF +       + + K DG +E+ L +   +  P WS  G  L + + +      +
Sbjct: 28  GVKIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSYDGEWLAYVKGEK-QNTLE 80

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           LY +  +G+  T  ++    S+ QW  
Sbjct: 81  LYRLK-DGKKVTPFHS--EVSNYQWSP 104


>gi|183222805|ref|YP_001840801.1| hypothetical protein LEPBI_I3466 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|167781227|gb|ABZ99525.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 461

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 72/208 (34%), Gaps = 43/208 (20%)

Query: 261 LAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNA------TERLTNTLFINISASYSPD 312
             P  + + K      ++      +I+  + +S+          + N+ F + S   S D
Sbjct: 86  FGPTMTPDAKTLYFYSKRSNRGYTEIFKSNRKSDGSWDFPEEVSVLNSPFDDQSPFISRD 145

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-ASYFDPVWS---------------- 355
              ++  S+R+G  ++ +       +  IS+D   +++    WS                
Sbjct: 146 GKTLLLSSNRDGSVEVSLPD----GKVGISRDLYVSNWNGKDWSIPVALPSAINTEEIEE 201

Query: 356 -PQ--GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----------TWSPSGR 402
            P   GD + FT++   K  +  +     +     +   L +P           ++  G+
Sbjct: 202 NPHLLGDTLLFTRYPFGKPNLAKVYYSQFKNNQWTKPKLLPSPINDDYATIAAAFNDDGK 261

Query: 403 SLIFSRKKDGDTGS-KLYSIDLNGRNET 429
            L F+  + G  G   LY   + G   T
Sbjct: 262 ILFFASNRPGGYGGFDLYMAKIEGETFT 289



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 76/233 (32%), Gaps = 38/233 (16%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDED----ILRVYLMDTRIDRAPKRIG--NFRSMILA 262
           + +   F P  +P+ + + + +         I +           P+ +   N      +
Sbjct: 80  NSEFQEFGPTMTPDAKTLYFYSKRSNRGYTEIFKSNRKSDGSWDFPEEVSVLNSPFDDQS 139

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINIS-ASYSPD------- 312
           P  S +GK  L+S  +D ++++   D +   +  L  +N    + S     P        
Sbjct: 140 PFISRDGKTLLLSSNRDGSVEVSLPDGKVGISRDLYVSNWNGKDWSIPVALPSAINTEEI 199

Query: 313 -------SSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--------EASYFDPVWSPQ 357
                     ++F     GK  L  +  +     + ++ K        + +     ++  
Sbjct: 200 EENPHLLGDTLLFTRYPFGKPNLAKVYYSQFKNNQWTKPKLLPSPINDDYATIAAAFNDD 259

Query: 358 GDLIAFTKFSG---EKFAIGVMKKDGSQERLLVEDSNLQAPTWSP-SGRSLIF 406
           G ++ F          F + + K +G          NL +P  SP     ++F
Sbjct: 260 GKILFFASNRPGGYGGFDLYMAKIEGETF---TNIENLGSPINSPEDEAYIVF 309


>gi|35193112|gb|AAH58601.1| Wdr26 protein [Mus musculus]
          Length = 486

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 173 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 232

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 233 AWSPDDSYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 291

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 292 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRVRGYNFE---- 340

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 341 --DLTDRNIVQEDHPIMSFTISKNGR 364


>gi|109900267|ref|YP_663522.1| peptidase S9B, dipeptidylpeptidase IV-like [Pseudoalteromonas
           atlantica T6c]
 gi|109702548|gb|ABG42468.1| dipeptidyl-peptidase IV, Serine peptidase, MEROPS family S09B
           [Pseudoalteromonas atlantica T6c]
          Length = 735

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/224 (12%), Positives = 73/224 (32%), Gaps = 42/224 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-------------- 263
            +SP++ K+A+   D+  +  +   +   D   K I         P              
Sbjct: 210 WWSPDESKIAFTQVDESPVDEITRSEIYSDS-IKMINQRYPSAGTPNVTVKLAVKDLASG 268

Query: 264 ------------------RFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTL- 301
                              +  + +      Q      +      S   ++   LT +  
Sbjct: 269 DTQWVDLGKEQDIYLARVNWMKDSQTLTYQWQSRNQQTLELRAFDSKTAKQSVLLTESSN 328

Query: 302 ---FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               +N    +  D    ++ S++ G + LY+ +++G+  +++++           + + 
Sbjct: 329 TWVNLNDDLHFLNDQKHFIWASEKSGYKHLYLYKTDGTLVRQLTKGDWVVDEIEAINEKQ 388

Query: 359 DLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            L+ FT  +    +  I  +   G   + + + S   AP++S  
Sbjct: 389 GLVYFTGRADTPLEQHIYAVAIAGGDIKKISQRSGTHAPSFSDD 432



 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 83/250 (33%), Gaps = 53/250 (21%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---SVQKDEA 281
            +   +     +    L   RI  +P   G+  + +   + S +GKR           E 
Sbjct: 6   WILLCSLVVPAMATENLTIERIFDSPALEGSSPNSV---KVSPDGKRVTFLQGKTTDYER 62

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--------------VFESDREGKEQ 327
            D++  ++ +  T+ L N+  ++       D  +                F SD +GK  
Sbjct: 63  YDLWEYNIATGKTQMLFNSDDLHSGPESLSDEEKARRERMRLSGSGIVNYFWSD-DGKAL 121

Query: 328 LYVMQSN------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           L+ +  +      G D+ +   D +A   D  +SP+ + I++ +       + +      
Sbjct: 122 LFPLAGDAYYFRLGDDKAQKILDTDAFETDIRFSPKANFISYVREQ----NLFIKDIKTQ 177

Query: 382 QERLLVEDS------------------NLQAPTWSPSGRSLIFS----RKKDGDTGSKLY 419
            E  L  D                    +    WSP    + F+       D  T S++Y
Sbjct: 178 VETQLTFDGKGPIKNAMAEFVAQEEMGRMTGYWWSPDESKIAFTQVDESPVDEITRSEIY 237

Query: 420 SIDLNGRNET 429
           S  +   N+ 
Sbjct: 238 SDSIKMINQR 247



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 61/189 (32%), Gaps = 49/189 (25%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPR-------------- 264
           SP+ ++V +      D  R  L +  I     + + N   +   P               
Sbjct: 44  SPDGKRVTFLQGKTTDYERYDLWEYNIATGKTQMLFNSDDLHSGPESLSDEEKARRERMR 103

Query: 265 ----------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                     +S +GK  L  +  D     Y   L  +  +++ +T        +SP ++
Sbjct: 104 LSGSGIVNYFWSDDGKALLFPLAGD----AYYFRLGDDKAQKILDTDAFETDIRFSPKAN 159

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQG 358
            I +  +    + L++       + +++ D +    + +                WSP  
Sbjct: 160 FISYVRE----QNLFIKDIKTQVETQLTFDGKGPIKNAMAEFVAQEEMGRMTGYWWSPDE 215

Query: 359 DLIAFTKFS 367
             IAFT+  
Sbjct: 216 SKIAFTQVD 224


>gi|330965326|gb|EGH65586.1| hypothetical protein PSYAC_11871 [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 377

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 67/179 (37%), Gaps = 23/179 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FSS+G+   +  +    +  +S++ ++ A ++++    I      +P  ++    +D +
Sbjct: 206 AFSSDGRFMYVVGEMSGTVTAFSINEKTGALKQVSQADGIPARLRLAPGQARDARNNDLK 265

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                 +  ++                    +P G  +  ++ +    ++  +       
Sbjct: 266 DDPTPRIWAAD-----------------IRLAPDGKWLFISERTTSSVSVFKVDPAKGSV 308

Query: 384 RLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             +    VE+   +    SP+GR L+ S +K    GS  Y+I  +G  + +   P+   
Sbjct: 309 TFVENYPVEEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIGASGALKRVSEEPSGKG 365


>gi|256079973|ref|XP_002576258.1| hypothetical protein [Schistosoma mansoni]
 gi|238661522|emb|CAZ32494.1| WD repeat protein SL1-17, putative [Schistosoma mansoni]
          Length = 299

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 86/261 (32%), Gaps = 19/261 (7%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +YQ      G  +  I        S  + + + + D +   +           +   FSP
Sbjct: 52  LYQFEGHRLGVISVDINSTGTLAASSSLDSQILLWDLETGRLTKTYDGDPADTWTIAFSP 111

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +A  ++       V +++ +  +    I      + +  + S+G +   +   +  
Sbjct: 112 DSRFLATGSHTG----CVNMINVQTAQKEGSIQLEGKFVYSLAYISDGSKLA-AGTINGL 166

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKR 340
           + I   DL++ + + L        S S+SPD   +   SD    +Q+ V    +G     
Sbjct: 167 VSIC--DLETGSVQFLDGHATPVRSVSFSPDGRLLASASD---DKQIKVFDVRDGRLVIP 221

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWS 398
                +       ++     +          ++ +      +E+      +  +    +S
Sbjct: 222 SLNGHKGWVVSVDFASDNRHLVTASTD---CSVRIWDLASKEEKHCFNTHEDQVWCARYS 278

Query: 399 PSGRSLIFSRKKDGDTGSKLY 419
           P G ++I       D    +Y
Sbjct: 279 PQGNNII---SVGDDRSIMIY 296



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 59/166 (35%), Gaps = 21/166 (12%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY----SPDSSQIVFESDREGKEQ 327
              S   D  + ++  DL++    RLT T   + + ++    SPDS  +   S       
Sbjct: 73  LAASSSLDSQILLW--DLETG---RLTKTYDGDPADTWTIAFSPDSRFLATGSHTGCVNM 127

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + V  +      ++  + +  Y     S  G  +A    +G    + +   +    + L 
Sbjct: 128 INVQTAQKEGSIQL--EGKFVYSLAYIS-DGSKLAAGTING---LVSICDLETGSVQFLD 181

Query: 388 EDSN-LQAPTWSPSGRSLIFSRKKD-----GDTGSKLYSIDLNGRN 427
             +  +++ ++SP GR L  +              +L    LNG  
Sbjct: 182 GHATPVRSVSFSPDGRLLASASDDKQIKVFDVRDGRLVIPSLNGHK 227


>gi|26344548|dbj|BAC35923.1| unnamed protein product [Mus musculus]
 gi|187952355|gb|AAI39338.1| WD repeat domain 26 [Mus musculus]
 gi|187953181|gb|AAI39337.1| WD repeat domain 26 [Mus musculus]
          Length = 514

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 201 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 260

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 261 AWSPDDSYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 319

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 320 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRVRGYNFE---- 368

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 369 --DLTDRNIVQEDHPIMSFTISKNGR 392


>gi|313682899|ref|YP_004060637.1| hypothetical protein Sulku_1776 [Sulfuricurvum kujiense DSM 16994]
 gi|313155759|gb|ADR34437.1| hypothetical protein Sulku_1776 [Sulfuricurvum kujiense DSM 16994]
          Length = 582

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 79/261 (30%), Gaps = 61/261 (23%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDD------EDILRVYLMDTRIDRAP---KRIGNFRSMI 260
            +     P  S + + V + +Y          I  V+L DT+        + I  +    
Sbjct: 236 GNDASVSPVISADGRYVVFESYSSNLISGAGGISDVFLKDTQTGITTLISQSIYGYGGND 295

Query: 261 LA--PRFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTLFINIS---- 306
            +     SS+G+  +             +   DI+  D Q+  T  ++++    I     
Sbjct: 296 DSYNTAISSDGRYVVFRSDASNLVNGDTNGYGDIFLRDTQTGITSLVSSSSSSEIGNRAS 355

Query: 307 --ASYSPDSSQIVFESDRE----------------GKEQLYVMQSNGSDQKRISQDKEAS 348
                S D + +VFES                       +++  +       IS +   +
Sbjct: 356 WYPDISADGNFVVFESASSNIVAGDVPQIFDGIELWFSDIFLKNTITGAATLISSNSSGA 415

Query: 349 Y-----FDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGSQERLLVEDSNLQ-- 393
           +     F+   S  G  + F           +  +  I +         L+   +  +  
Sbjct: 416 FGNSDSFNASISSNGRYVVFDSTATNLVSGDTNSQSDIFLKDTQTGITTLISCTAAGEQG 475

Query: 394 -----APTWSPSGRSLIFSRK 409
                +P+ S  GR ++F   
Sbjct: 476 NNGSYSPSISADGRFVVFYTS 496



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 82/288 (28%), Gaps = 67/288 (23%)

Query: 209 SRDQILFEPRFSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKRIGN-----F 256
             +   +    S + + V +          D      ++L DT+         +      
Sbjct: 292 GGNDDSYNTAISSDGRYVVFRSDASNLVNGDTNGYGDIFLRDTQTGITSLVSSSSSSEIG 351

Query: 257 RSMILAPRFSSNGKRALISVQKD----------------EAMDIYSVDLQSNATERLTN- 299
                 P  S++G   +                         DI+  +  + A   +++ 
Sbjct: 352 NRASWYPDISADGNFVVFESASSNIVAGDVPQIFDGIELWFSDIFLKNTITGAATLISSN 411

Query: 300 -----TLFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRIS---- 342
                    + +AS S +   +VF+S        D   +  +++  +       IS    
Sbjct: 412 SSGAFGNSDSFNASISSNGRYVVFDSTATNLVSGDTNSQSDIFLKDTQTGITTLISCTAA 471

Query: 343 -QDKEASYFDPVWSPQGDLIAF--------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            +      + P  S  G  + F        +  + +   + +         L+ + S+ +
Sbjct: 472 GEQGNNGSYSPSISADGRFVVFYTSATNFVSGDTNDNGDVFLKDTQTGALELISKSSSGE 531

Query: 394 -------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                   P  S  G  + FS +      S L S D NG  +  I   
Sbjct: 532 IGNNRSIYPFISADGSYITFSSE-----ASNLVSNDTNGSFDVFIVGN 574



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 50/182 (27%), Gaps = 41/182 (22%)

Query: 268 NGKRALISV--------QKDEAMDIYSVDLQSNATERL------TNTLFINISASYSPDS 313
           +G+                +   DI+  D Q+     +      T     ++S   S D 
Sbjct: 190 DGRYITFESYATNLINGDTNAKEDIFLKDTQTGTVSLISSSSSGTIGNDASVSPVISADG 249

Query: 314 SQIVFESDR-------EGKEQLYVMQSNGSDQKRISQ-----DKEASYFDPVWSPQGDLI 361
             +VFES          G   +++  +       ISQ           ++   S  G  +
Sbjct: 250 RYVVFESYSSNLISGAGGISDVFLKDTQTGITTLISQSIYGYGGNDDSYNTAISSDGRYV 309

Query: 362 AFTK--------FSGEKFAIGVMKKDGSQERLLVEDSNLQ-------APTWSPSGRSLIF 406
            F           +     I +         L+   S+ +        P  S  G  ++F
Sbjct: 310 VFRSDASNLVNGDTNGYGDIFLRDTQTGITSLVSSSSSSEIGNRASWYPDISADGNFVVF 369

Query: 407 SR 408
             
Sbjct: 370 ES 371


>gi|114644490|ref|XP_001139729.1| PREDICTED: achalasia, adrenocortical insufficiency, alacrimia
           (Allgrove, triple-A) isoform 2 [Pan troglodytes]
          Length = 521

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  DD     V + +      P      +  + +  +       L    
Sbjct: 158 AWHPHTNKFAVALLDD----SVRVYNASSTIVPSLKHRLQRNVASLAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIR 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  I  T  S   F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKILATTPS-AVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGSRLLFT 346


>gi|75907763|ref|YP_322059.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75701488|gb|ABA21164.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 589

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 78/214 (36%), Gaps = 19/214 (8%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + Q +  A+ D      + + +    +    +      + A   + +  + LIS   D+ 
Sbjct: 314 DGQTLMSASEDK----TIKVWNLDTAKVTTTLQGHTDTVRAIALTPD-DQTLISGSADKT 368

Query: 282 MDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + I+  +LQ+   +R  ++L     S + S D   +V      G  Q++          R
Sbjct: 369 IKIW--NLQTFKLKRTMSSLSGGIWSLAISSDGQTLV-TVHENGSIQIW--NFPTGQLLR 423

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSN-LQAPTWS 398
             +  +   F    SP G+  A     G    I +      +  R + E  + ++A  +S
Sbjct: 424 TIKGHQGRVFSVAMSPDGETFA---TGGIDKNIKIWNLYTGECLRTIAEHQDAVRALVFS 480

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             G+ L+ S     D   K++ +       TL+ 
Sbjct: 481 HDGKMLVSSSW---DQTIKIWQMPTGKLLHTLLG 511



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/154 (10%), Positives = 56/154 (36%), Gaps = 9/154 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++++SG    ++ + +     ++    S    ++    S + Q +     +      + +
Sbjct: 358 QTLISGSADKTIKIWNLQTFKLKRTMSSLSGGIWSLAISSDGQTLVTVHENG----SIQI 413

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
            +    +  + I   +  + +   S +G+    +   D+ + I+  +L +      +   
Sbjct: 414 WNFPTGQLLRTIKGHQGRVFSVAMSPDGETFA-TGGIDKNIKIW--NLYTGECLRTIAEH 470

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                +  +S D   +V  S  +   +++ M + 
Sbjct: 471 QDAVRALVFSHDGKMLV-SSSWDQTIKIWQMPTG 503


>gi|94985640|ref|YP_605004.1| WD-40 repeat-containing protein [Deinococcus geothermalis DSM
           11300]
 gi|94555921|gb|ABF45835.1| WD-40 repeat protein [Deinococcus geothermalis DSM 11300]
          Length = 376

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 62/190 (32%), Gaps = 29/190 (15%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F+ +G+  L + Q          D ++     L       +S   SPD   +    DR  
Sbjct: 132 FTPDGRFLLTADQTGLRRW----DARTGRL--LRAVPGKFLSQHVSPDGRSVATVGDR-Y 184

Query: 325 KEQLYVMQSNGS------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           + +L+    +          K   +   A      WS     +AF+        + V   
Sbjct: 185 RVELWATDLSRRLKALPPQPKDCLRGPGAWSTGITWSADSTRLAFSCNR----EVRVWNL 240

Query: 379 DGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDG------DTGSKLYSIDLNGRNET 429
                + L      +   APT+SP GR ++    + G        G ++  + L+  N  
Sbjct: 241 AAGGVQSLKRGGKHEYPDAPTFSPDGRFVVADEDQFGAGVWDVGNGQRVAQLRLDAPNAQ 300

Query: 430 LIN---TPAY 436
           + +   TP  
Sbjct: 301 VTDVEFTPGN 310


>gi|326515300|dbj|BAK03563.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 595

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 66/192 (34%), Gaps = 22/192 (11%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFIN 304
            +A + +   R  +   +FS+NGK    S   D+   I+ VD       +  LT      
Sbjct: 260 SQAVQVLSAHRDEVWFLQFSNNGKYLA-SASNDKTAVIWKVDEDGELLLKHTLTGHEKPV 318

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +  ++SPD  Q++     E    +        +   + +          W P G  I   
Sbjct: 319 MMVAWSPDDCQLLTCGMEE---VIRRWDIESGECVHVYEKSGIGLVSCGWFPDGKQIL-- 373

Query: 365 KFSGEKFAIGVMKKDGSQE-----RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                   + +   DG Q      +   + S+      S  G+ +I S  +D    S + 
Sbjct: 374 -SGLSDQRLCLWDLDGKQADCWEGQRSTKTSDF---AVSKDGKLII-STSRD----SAIL 424

Query: 420 SIDLNGRNETLI 431
             + + + E LI
Sbjct: 425 LFNRDTKQERLI 436



 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 78/231 (33%), Gaps = 33/231 (14%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI-RYLTPSRDQI 213
           AH   D+++       G + +          S      +  +D DG  + ++     ++ 
Sbjct: 268 AHR--DEVWFLQFSNNGKYLAS--------ASNDKTAVIWKVDEDGELLLKHTLTGHEKP 317

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +    +SP+  ++     ++     +   D                +++  +  +GK+ L
Sbjct: 318 VMMVAWSPDDCQLLTCGMEE----VIRRWDIESGECVHVYEKSGIGLVSCGWFPDGKQIL 373

Query: 274 ISVQKDEAMDIYSVDLQSNAT-----ERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            S   D+ + ++  DL          +R T T    +    S D   I+  S       +
Sbjct: 374 -SGLSDQRLCLW--DLDGKQADCWEGQRSTKTSDFAV----SKDGKLIISTSR---DSAI 423

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            +   +   ++ I  ++E +      S  GD +       E+  +  ++ D
Sbjct: 424 LLFNRDTKQERLI--EEEETVTSFSLSEDGDFLL-VNLINEQIHLWNIRND 471



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 75/223 (33%), Gaps = 13/223 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG+    LC+ D DG         R     +   S + + +   + D        ++   
Sbjct: 374 SGLSDQRLCLWDLDGKQADCWEGQRSTKTSDFAVSKDGKLIISTSRDSA------ILLFN 427

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLF 302
            D   +R+      + +   S +G   L+++  +E + ++++       +R T    + F
Sbjct: 428 RDTKQERLIEEEETVTSFSLSEDGDFLLVNLI-NEQIHLWNIRNDPIRVKRYTGHKRSRF 486

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +  S       S+  F +      ++Y+      D          +     W+P    + 
Sbjct: 487 VIRSCF---GGSEQAFIASGSEDAKVYIWHRASGDVIETLSGHSGAVNCVSWNPANPHML 543

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +        I  +KK  ++ R     SN      S +G  L+
Sbjct: 544 ASASDDHTIRIWGLKKATAKRRDAGSSSNGIHMNGSANGNGLV 586


>gi|288918726|ref|ZP_06413073.1| WD-40 repeat protein [Frankia sp. EUN1f]
 gi|288349928|gb|EFC84158.1| WD-40 repeat protein [Frankia sp. EUN1f]
          Length = 332

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 74/215 (34%), Gaps = 14/215 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSPN + +A A+ D    +      +   +    + + RS++ +  FS  G     +  
Sbjct: 124 AFSPNGRLLATASIDGTAGIWDVSEHSAPMQLAS-VTDHRSVVTSVAFSPGGHWLA-TGS 181

Query: 278 KDEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D  + I+ V   +      T   +   +    SYSP+   +   S  +    +Y + S 
Sbjct: 182 LDRTVRIWDVTSPTTLVRTATLEDHDRAVQT-ISYSPNGHLLAIGS-WDYTVSIYEISSG 239

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSN 391
                     ++       +SP   L+A    SG+   +  +    S      L      
Sbjct: 240 IYSLAGTVAGQDKEILSIAFSPDSKLLA-VAGSGKIVRLWSVADPTSPICVGTLAGHRGE 298

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           + +  +S  G  L        D  ++LY I  + R
Sbjct: 299 IWSVAFSSDGHYLA---TGGADGKTRLYEISGSAR 330



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 76/213 (35%), Gaps = 17/213 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALI 274
            FSP+ + +A A+ + +    V + D      P +I    + R  ++   FS++G+    
Sbjct: 34  SFSPDGRLLAAASAEKK----VRVWDIASPSVPVQIATVTDRRDKVVTISFSADGRLLAA 89

Query: 275 SVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           + +          +    A +  L        S ++SP+   +   +  +G   ++ +  
Sbjct: 90  AGRAKTIKLWDLTNPALPALKAVLAGHRKAVESLAFSPNGRLLA-TASIDGTAGIWDVSE 148

Query: 334 NGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---ED 389
           + +  +  S  D  +      +SP G  +A          I  +    +  R       D
Sbjct: 149 HSAPMQLASVTDHRSVVTSVAFSPGGHWLATGSLD-RTVRIWDVTSPTTLVRTATLEDHD 207

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +Q  ++SP+G  L        D    +Y I 
Sbjct: 208 RAVQTISYSPNGHLLAIGSW---DYTVSIYEIS 237



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 70/197 (35%), Gaps = 17/197 (8%)

Query: 234 EDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS- 291
            + + V    +++ R  +R+G      +    FS +G+    +        +   D+ S 
Sbjct: 3   SEPIAVIQHGSKLARFARRVGIVVPLGVSEVSFSPDGRLLAAASA---EKKVRVWDIASP 59

Query: 292 NATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEA 347
           +   ++   T+     ++ S+S D   +   + R    +L+ +        K +      
Sbjct: 60  SVPVQIATVTDRRDKVVTISFSADGRLLA-AAGRAKTIKLWDLTNPALPALKAVLAGHRK 118

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSL 404
           +     +SP G L+A     G    I  + +  +  +L       S + +  +SP G  L
Sbjct: 119 AVESLAFSPNGRLLATASIDGTA-GIWDVSEHSAPMQLASVTDHRSVVTSVAFSPGGHWL 177

Query: 405 IFSRKKDGDTGSKLYSI 421
                   D   +++ +
Sbjct: 178 ATGSL---DRTVRIWDV 191


>gi|255653011|ref|NP_001157418.1| WD repeat-containing protein 38 [Bos taurus]
 gi|158455145|gb|AAI49695.2| WDR38 protein [Bos taurus]
 gi|296482180|gb|DAA24295.1| WD repeat domain 38 [Bos taurus]
          Length = 296

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 53/160 (33%), Gaps = 10/160 (6%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              K  G  R  + +  FS +G+R L +  +D  +  +          RL          
Sbjct: 12  GRVKFFGRHRGEVNSSAFSPDGQRLL-TASEDGCVYGWETQ-SGRLLWRLRGHKGPVRFC 69

Query: 308 SYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +SPD       S DR     + +  +  +   ++ +  + S     +S     +A   +
Sbjct: 70  RFSPDGRLFASTSCDRT----IRLWDATDAKCLQVLKGHQRSVETVSFSHDSKQLASGGW 125

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
                   V    G   R  V   + +Q+  ++PS   L 
Sbjct: 126 DKRVMLWEVQS--GQVLRHFVGHRDSVQSSDFAPSSDCLA 163



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 73/207 (35%), Gaps = 20/207 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++    R ++     FSP+ Q++  A+ D      VY  +T+  R   R+   +  +
Sbjct: 12  GRVKFFGRHRGEVNSS-AFSPDGQRLLTASEDG----CVYGWETQSGRLLWRLRGHKGPV 66

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE 319
              RFS +G R   S   D  + ++  D       ++      ++   S+S DS Q+   
Sbjct: 67  RFCRFSPDG-RLFASTSCDRTIRLW--DATDAKCLQVLKGHQRSVETVSFSHDSKQLA-- 121

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                 +++ + +       R       S     ++P  D +A   +      I +    
Sbjct: 122 -SGGWDKRVMLWEVQSGQVLRHFVGHRDSVQSSDFAPSSDCLATGSWDST---IRMWDLR 177

Query: 380 GSQERLLV-----EDSNLQAPTWSPSG 401
                +          N+    +SPSG
Sbjct: 178 AGTPGIFHQELEGHRGNISCLCYSPSG 204



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 15/186 (8%)

Query: 181 SESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           S+ + SG     + + + + G  +R+    RD +     F+P+   +A  ++D      +
Sbjct: 117 SKQLASGGWDKRVMLWEVQSGQVLRHFVGHRDSV-QSSDFAPSSDCLATGSWDS----TI 171

Query: 240 YLMDTRIDRAP---KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            + D R        + +   R  I    +S +G   L S   D+ + I+    +S    +
Sbjct: 172 RMWDLRAGTPGIFHQELEGHRGNISCLCYSPSG--LLASGSWDKTIHIWKPSTRS-LLIQ 228

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L   +    S ++SPD  Q+           + V   N        +          + P
Sbjct: 229 LKGHITWVKSIAFSPDGQQLA---SAGYSHMVKVWDCNTGKCTETLKGVLNVAHACAFMP 285

Query: 357 QGDLIA 362
            G L+ 
Sbjct: 286 DGKLLV 291



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 68/210 (32%), Gaps = 26/210 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +        +   RFSP+ +  A  + D      + L D    +  + +   +  +    
Sbjct: 57  WRLRGHKGPVRFCRFSPDGRLFASTSCDR----TIRLWDATDAKCLQVLKGHQRSVETVS 112

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--- 321
           FS + K+   S   D+ + ++ V                  S+ ++P S  +   S    
Sbjct: 113 FSHDSKQLA-SGGWDKRVMLWEVQ-SGQVLRHFVGHRDSVQSSDFAPSSDCLATGSWDST 170

Query: 322 ------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                 R G   ++  +  G            +     +SP G L+A   +  +   I  
Sbjct: 171 IRMWDLRAGTPGIFHQELEG---------HRGNISCLCYSPSG-LLASGSWD-KTIHIWK 219

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                   +L    + +++  +SP G+ L 
Sbjct: 220 PSTRSLLIQLKGHITWVKSIAFSPDGQQLA 249



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 45/117 (38%), Gaps = 5/117 (4%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +Q + G +G+ +      S  + SG    ++ +      ++          +    FSP+
Sbjct: 185 HQELEGHRGNISCLCYSPSGLLASGSWDKTIHIWKPSTRSLLIQLKGHITWVKSIAFSPD 244

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            Q++A A Y       V + D    +  + +    ++  A  F  +GK  L+S   D
Sbjct: 245 GQQLASAGYSH----MVKVWDCNTGKCTETLKGVLNVAHACAFMPDGK-LLVSGAVD 296


>gi|67473717|ref|XP_652608.1| WD domain containing protein [Entamoeba histolytica HM-1:IMSS]
 gi|56469476|gb|EAL47222.1| WD domain containing protein [Entamoeba histolytica HM-1:IMSS]
          Length = 825

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/225 (16%), Positives = 73/225 (32%), Gaps = 33/225 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAP----RFSSNGKRALI 274
           SP+ +K  + T   +  +RV+ ++   D   + ++     +   P    RFS +G    +
Sbjct: 23  SPDGKK--FVTGGGDGKVRVWNIEALSDETVQPKLYGVIYVSTLPVNICRFSPDGTILAV 80

Query: 275 -------SVQK-DEAMDIYSVDLQSN-------ATERLTNTLFINISASYSPDSSQIVFE 319
                  S+ K +   D +  D + N           L   +      S+SPD     F 
Sbjct: 81  GNDDKIVSLWKSEGMKDEFEKDEEGNVYCEEYLNIGNLRGHVQEITDISWSPDGK---FL 137

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +       + +      + K + +   +S F   W P    I       +K  I  +K  
Sbjct: 138 ASSSADNTVTIWDITKMELKDVFRGHNSSVFGVAWDPINKYIV--SMDVQKVVIWDIKTL 195

Query: 380 GSQERL------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
               R+          +     +WSP G +++            L
Sbjct: 196 EEIARIEDVYKKANHGNFSSRISWSPDGMNIVVGSAVSKKRHVAL 240



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 75/230 (32%), Gaps = 33/230 (14%)

Query: 218 RFSPNQQKVA----------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI---LAPR 264
           RFSP+   +A          + +   +D                 IGN R  +       
Sbjct: 70  RFSPDGTILAVGNDDKIVSLWKSEGMKDEFEKDEEGNVYCEEYLNIGNLRGHVQEITDIS 129

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
           +S +GK    S   D  + I+  D+     + +      ++   ++ P +  IV      
Sbjct: 130 WSPDGKFLA-SSSADNTVTIW--DITKMELKDVFRGHNSSVFGVAWDPINKYIV----SM 182

Query: 324 GKEQLYVMQSNG-SDQKRI-----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-VM 376
             +++ +       +  RI       +         WSP G  I       +K  +  ++
Sbjct: 183 DVQKVVIWDIKTLEEIARIEDVYKKANHGNFSSRISWSPDGMNIVVGSAVSKKRHVALLI 242

Query: 377 KKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +++    +LL    N    + +SP     I++  K+G      +     G
Sbjct: 243 RRNKWTVQLLTAHLNEVICSRFSPE----IYTYTKEGGKKKSAFCTFATG 288



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 75/221 (33%), Gaps = 30/221 (13%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                Q + +  +SP+ + +A ++ D+     V + D              S +    + 
Sbjct: 118 LRGHVQEITDISWSPDGKFLASSSADN----TVTIWDITKMELKDVFRGHNSSVFGVAWD 173

Query: 267 SNGKRAL-ISVQKDEAMDIYSVDLQSNATERL------TNTLFINISASYSPDSSQIVFE 319
              K  + + VQK    DI +++       R+       N    +   S+SPD   IV  
Sbjct: 174 PINKYIVSMDVQKVVIWDIKTLE----EIARIEDVYKKANHGNFSSRISWSPDGMNIVVG 229

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ---------GDLIAFTKFSGEK 370
           S    K  + ++        ++            +SP+             AF  F+   
Sbjct: 230 SAVSKKRHVALLIRRNKWTVQLLTAHLNEVICSRFSPEIYTYTKEGGKKKSAFCTFATGG 289

Query: 371 FA----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
                 I   KKD     L+ +  D+++Q   W+  G+ ++
Sbjct: 290 MGGDCCIWENKKDIDSICLVTDVFDNSIQDIAWANQGKMVL 330


>gi|258593554|emb|CBE69895.1| exported protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 462

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 23/225 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG+ +R         ++   FS +  ++       E    + L D   D     I ++ 
Sbjct: 124 SDGS-VRETMNEHKWQIWALAFSADAARLVSGDMMAE----LKLWDLASDS---VIYSWP 175

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               +  FS +GK  +      +       D  +   +R       +   +++PD +++V
Sbjct: 176 LQNGSVAFSPDGKYLV---SNGQNSYARMYDTGTFTLKRAFLPWSGDRGVAFTPDGAKLV 232

Query: 318 FESDREGK--------EQLYVMQSNGS---DQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
                 G           + V +++        +I  +          S  G   A + +
Sbjct: 233 TSGSIPGGVDGVPTSAAIIKVFRASDGVLLKAIKIYDNGGQQVRAFALSVDGKYAAISLY 292

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           S  +  I  +      ++  V  +++    ++P G  L + R   
Sbjct: 293 SD-QIRIYRLSDGALMKQYTVGTADVNGLAFTPDGMGLAYIRADG 336


>gi|195109502|ref|XP_001999323.1| GI23133 [Drosophila mojavensis]
 gi|193915917|gb|EDW14784.1| GI23133 [Drosophila mojavensis]
          Length = 339

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 70/190 (36%), Gaps = 19/190 (10%)

Query: 239 VYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           V + D R D   +     +     +++   SS+G+    S   D +M ++  D ++   +
Sbjct: 72  VKVWDIREDNTLELRHKLKGHALGVVSVAVSSDGQTIA-SSSLDSSMCLW--DAKTGDKK 128

Query: 296 R-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPV 353
             LT       +  +SP +  ++     +GK  + +        +++   +   Y     
Sbjct: 129 HMLTFGPVDLWTVGFSPCNKYVI-SGLNDGK--ISMYSVETGKTEQVLDAQNGKYTLSIA 185

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKD 411
           +SP G  IA     G    I +      +    +E   +   +  +SP+ + L+      
Sbjct: 186 YSPDGKYIANGAIDG---IITIFDVAAGKVAQTLEGHAMPVRSLCFSPNSQMLLTGSD-- 240

Query: 412 GDTGSKLYSI 421
            D   KLY +
Sbjct: 241 -DGHMKLYDV 249



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 64/182 (35%), Gaps = 14/182 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   + L     +      +SP+ + +A    D      + + D    +  + +      
Sbjct: 167 GKTEQVLDAQNGKYTLSIAYSPDGKYIANGAIDG----IITIFDVAAGKVAQTLEGHAMP 222

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + +  FS N  + L++   D  M +Y V   S+    L+      +  S+S D       
Sbjct: 223 VRSLCFSPN-SQMLLTGSDDGHMKLYDV-AHSDVVGTLSGHASWVLCVSFSEDGKHFA-S 279

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           S  +   +++    + S++K I    E S   +   +SP  D +  +    +   I    
Sbjct: 280 SSSDRSVKIW----DTSERKCIHTFTEHSDQVWGVRYSPSNDKVI-SASEDKSLNIYYCP 334

Query: 378 KD 379
            +
Sbjct: 335 PN 336


>gi|320591394|gb|EFX03833.1| periodic tryptophan protein 2 [Grosmannia clavigera kw1407]
          Length = 908

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 86/223 (38%), Gaps = 20/223 (8%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +A+       +L V+   +      K+ G+F S   A  +S +G+R +++   D  
Sbjct: 314 SGEWLAFGASKLGQLL-VWEWQSE-SYILKQQGHFDSTN-ALVYSPDGQR-VVTTADDGR 369

Query: 282 MDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + ++  D++S       T       +  ++   + ++F S  +G  + + +     + + 
Sbjct: 370 IKVW--DVESGFCIVTFTEHTSGVTACEFARKGN-VLFTSSLDGSVRAWDL-IRFRNFRT 425

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
            +     S+      P G+++A        F I +        +LL + S  + P     
Sbjct: 426 FTAPTRLSFSCMAVDPSGEVVAAGSID--SFDIHIWSVQTG--QLLDQLSGHEGPVSSLA 481

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           ++P G  L+       D  ++++S+    +    +   A   D
Sbjct: 482 FAPDGSGLVSGSW---DRTARIWSVFARTQTSEPLQLQADVVD 521



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 53/325 (16%), Positives = 103/325 (31%), Gaps = 48/325 (14%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           FN+I   S  Q   +  +I    +W + GA  L           +L V    W+ +    
Sbjct: 293 FNMIHTLSISQNDIDFVTINTSGEWLAFGASKL----------GQLLV----WEWQSESY 338

Query: 139 IIGKK--------FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG--- 187
           I+ ++           SP   R +  T +DD    +   +  F         S V+    
Sbjct: 339 ILKQQGHFDSTNALVYSPDGQRVV--TTADDGRIKVWDVESGFCIVTFTEHTSGVTACEF 396

Query: 188 -IIKNSLCVMDRDGA----------NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               N L     DG+          N R  T             P+ + VA  + D    
Sbjct: 397 ARKGNVLFTSSLDGSVRAWDLIRFRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSIDS--- 453

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             +++   +  +   ++      + +  F+ +G   + S   D    I+SV  ++  +E 
Sbjct: 454 FDIHIWSVQTGQLLDQLSGHEGPVSSLAFAPDGSGLV-SGSWDRTARIWSVFARTQTSEP 512

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L       +  +  PDS Q+   +  +G+   + +       + +  D          + 
Sbjct: 513 L-QLQADVVDVAIRPDSQQLA-IATLDGQLTFWSLS---EATQVLGLDGRRDVSGGRKAS 567

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGS 381
                A    +    +I     DG+
Sbjct: 568 DRRTAANVSGTKSFSSIR-YSTDGT 591


>gi|288918925|ref|ZP_06413268.1| WD-40 repeat protein [Frankia sp. EUN1f]
 gi|288349677|gb|EFC83911.1| WD-40 repeat protein [Frankia sp. EUN1f]
          Length = 170

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 60/159 (37%), Gaps = 9/159 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP----KRIGNFRSMILAPRFSSNGKRAL 273
            FSP  + +A ++    +   V+L D      P    + + +    + A  FS + +   
Sbjct: 5   AFSPIGRILAISSSPPGESGVVWLWDVSDPARPAQLGQPLTSRDGGVGAVAFSPDRRTLA 64

Query: 274 ISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           + +  D A+ ++ V   +   +     T+        ++SPD   +   +  +   +L+ 
Sbjct: 65  LGLGVDSAVQLWDVSDPARPAQMGNLPTDDYGSVFDMAFSPDGHILATSNYEQDSVRLWD 124

Query: 331 MQSNGSDQKR--ISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +            S + + S+    +SP G ++A    +
Sbjct: 125 VSDPARPAPLGHPSTNVKRSWASLAFSPDGHILAIGSQA 163



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 14/161 (8%)

Query: 262 APRFSSNGKRALISVQKDEAM---DIYSVDLQSNATE---RLTNTLFINISASYSPDSSQ 315
           +  FS  G+   IS           ++ V   +   +    LT+      + ++SPD   
Sbjct: 3   SVAFSPIGRILAISSSPPGESGVVWLWDVSDPARPAQLGQPLTSRDGGVGAVAFSPDRRT 62

Query: 316 IVFESDREGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +      +   QL+ +       +   +  D   S FD  +SP G ++A + +  +   +
Sbjct: 63  LALGLGVDSAVQLWDVSDPARPAQMGNLPTDDYGSVFDMAFSPDGHILATSNYEQDSVRL 122

Query: 374 GVMKKDGSQERLLVEDSNLQAPTW-----SPSGRSLIFSRK 409
             +  D ++   L   S     +W     SP G  L    +
Sbjct: 123 WDVS-DPARPAPLGHPSTNVKRSWASLAFSPDGHILAIGSQ 162



 Score = 37.3 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 55/158 (34%), Gaps = 18/158 (11%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYL---TPSRDQILFEPRFSPNQQKVAYATY 231
            RIL +S S         L  +  D A    L     SRD  +    FSP+++ +A    
Sbjct: 10  GRILAISSSPPGESGVVWLWDV-SDPARPAQLGQPLTSRDGGVGAVAFSPDRRTLA---L 65

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFR----SMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                  V L D      P ++GN        +    FS +G     S  + +++ ++  
Sbjct: 66  GLGVDSAVQLWDVSDPARPAQMGNLPTDDYGSVFDMAFSPDGHILATSNYEQDSVRLW-- 123

Query: 288 DLQSNATERLTNTLFINISASY-----SPDSSQIVFES 320
           D+   A          N+  S+     SPD   +   S
Sbjct: 124 DVSDPARPAPLGHPSTNVKRSWASLAFSPDGHILAIGS 161


>gi|303279318|ref|XP_003058952.1| entriole proteome WD40 repeat-containing protein [Micromonas
           pusilla CCMP1545]
 gi|226460112|gb|EEH57407.1| entriole proteome WD40 repeat-containing protein [Micromonas
           pusilla CCMP1545]
          Length = 495

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 83/236 (35%), Gaps = 13/236 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +    NSL + +       Y        +    ++P    +A  + D    +R++     
Sbjct: 44  TSSNDNSLMIWNFKPQMRAYRFTGHKDAVTTVAYNPTGGSIASGSKDC--TIRLWTPSVV 101

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
               PK +    + + +  FS NG+  + S   D+ + ++S          LT       
Sbjct: 102 GLYTPKVLKAHSACVRSVEFSENGESLV-SASDDKTIKLWSA-RDGKFLSTLTGHTNWVK 159

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            AS+SP+S+  V  SD    + + +          +  D  ++     + P G  IA   
Sbjct: 160 CASFSPESNAAVSASD---DKTVRLWDVKAGRCVYVIDDHFSAVNSCKFHPDGTCIA--- 213

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +G+   + +      +     + ++   + + ++ PSG  L+ S          L
Sbjct: 214 SAGDDCVVQLWDVRSKKLVQHYDGAHGARVNSVSFHPSGNFLLTSSDDGSIKVWDL 269



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 54/178 (30%), Gaps = 14/178 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S + VS     ++ + D       Y+       +   +F P+   +A       D   V 
Sbjct: 167 SNAAVSASDDKTVRLWDVKAGRCVYVIDDHFSAVNSCKFHPDGTCIA----SAGDDCVVQ 222

Query: 241 LMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
           L D R  +  +         + +  F  +G   L +   D ++ ++  DL+       L 
Sbjct: 223 LWDVRSKKLVQHYDGAHGARVNSVSFHPSGNFLL-TSSDDGSIKVW--DLREGQLFYTLN 279

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                 ++A +SP            G     VM    +  + +          P   P
Sbjct: 280 GHEGAVLNAEFSPAGDYFA-----SGGNDDQVMVWKTNFDRVLGDYSGGENKPPAIEP 332



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 71/210 (33%), Gaps = 20/210 (9%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           RDG  +  LT   + +     FSP       A+ D      V L D +  R    I +  
Sbjct: 143 RDGKFLSTLTGHTNWVKCA-SFSPESNAAVSASDDK----TVRLWDVKAGRCVYVIDDHF 197

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQ 315
           S + + +F  +G          +   +   D++S    +  +        S S+ P  + 
Sbjct: 198 SAVNSCKFHPDGTCIA---SAGDDCVVQLWDVRSKKLVQHYDGAHGARVNSVSFHPSGNF 254

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           ++  SD      + V               E +  +  +SP GD  A +  + ++  +  
Sbjct: 255 LLTSSD---DGSIKVWDLREGQLFYTLNGHEGAVLNAEFSPAGDYFA-SGGNDDQVMVWK 310

Query: 376 MKKDGSQERLL--VEDSNLQAPTWSPSGRS 403
              D    R+L        + P   P+ +S
Sbjct: 311 TNFD----RVLGDYSGGENKPPAIEPASKS 336


>gi|134055733|emb|CAK44106.1| unnamed protein product [Aspergillus niger]
          Length = 696

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 65/187 (34%), Gaps = 17/187 (9%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +N + V D    ++               FS N      +     +   + L + +   
Sbjct: 398 QRNLIKVWDATSGDLLQALDDSTSPAQVFEFSNND----LSWRLSLESYSINLWNRKTRE 453

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINI 305
               +      I +  FS +G+   +++  D  + I+S  L S   +    ++++     
Sbjct: 454 IGPVLNGSGCNISSLSFSPDGELLAVTL-PDRGISIWS--LSSGKLKTMLLISDSDGNIS 510

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLI 361
             ++SPD++ +   S   G   + +  +     +R+       +  +     +SP G L+
Sbjct: 511 HTAWSPDNTHLASVS---GNGTVLLWDTVTWTLRRLIGDYLGGERHTPRAIAFSPDGTLL 567

Query: 362 AFTKFSG 368
           A     G
Sbjct: 568 ASGWTRG 574



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 56/325 (17%), Positives = 98/325 (30%), Gaps = 63/325 (19%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD----IYQSITGEKGDFNSRILFVSE 182
             R+WDV   + I  K+  S       +A T S D       S+ G     + +   V++
Sbjct: 227 NVRVWDVSSGRLI--KQIKSPMQGQWALAQTFSIDRARAASYSLGGTHLLLDIKQWNVTK 284

Query: 183 SVVSGIIKNSLCVMDRDG--------------ANIRYLTPSRDQILFEP-RFS--PNQQK 225
           S      K     +  +G               N    T        +P R S   + + 
Sbjct: 285 SFKPHESKLLSMALSPNGELLATLCTKGTVRVWNTTDATLDHSIEAGDPKRISTGKDSKT 344

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--VQKDEAMD 283
           +  +  D +   +V   D       K    +    L  + S +G+    +   Q D+   
Sbjct: 345 LISSGLDQQQKGKVKWWDWASGTEVK--TTYGGGQLL-QLSPDGRLLASAQDYQSDQRNL 401

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------SDREG--KEQLYVMQSNG 335
           I   D  S     L   L  + S +        VFE      S R       + +     
Sbjct: 402 IKVWDATSGD---LLQALDDSTSPA-------QVFEFSNNDLSWRLSLESYSINLWNRKT 451

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSN 391
            +   +      +     +SP G+L+A T        I +      + + ++     D N
Sbjct: 452 REIGPVLNGSGCNISSLSFSPDGELLAVTLPDRG---ISIWSLSSGKLKTMLLISDSDGN 508

Query: 392 LQAPTWSPS----------GRSLIF 406
           +    WSP           G  L++
Sbjct: 509 ISHTAWSPDNTHLASVSGNGTVLLW 533



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 36/116 (31%), Gaps = 20/116 (17%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S+ SG +K  L + D DG             +    +SP+   +A  +        V L 
Sbjct: 490 SLSSGKLKTMLLISDSDG------------NISHTAWSPDNTHLASVS----GNGTVLLW 533

Query: 243 DTRIDRAPKRIGNFRSMIL----APRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           DT      + IG++         A  FS +G        +  +           + 
Sbjct: 534 DTVTWTLRRLIGDYLGGERHTPRAIAFSPDGTLLASGWTRGFSSWGPHSPESGTSL 589


>gi|28174989|gb|AAH20044.2| Wdr26 protein [Mus musculus]
          Length = 403

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT + +  K +      +   
Sbjct: 90  QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVDPDTHLLKLLKTLEGHAYGVSYI 149

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 150 AWSPDDSYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 208

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 209 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRVRGYNFE---- 257

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 258 --DLTDRNIVQEDHPIMSFTISKNGR 281


>gi|84499471|ref|ZP_00997759.1| hypothetical protein OB2597_06070 [Oceanicola batsensis HTCC2597]
 gi|84392615|gb|EAQ04826.1| hypothetical protein OB2597_06070 [Oceanicola batsensis HTCC2597]
          Length = 358

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 8/106 (7%)

Query: 293 ATERLTNTLFINISASYSPDSS--QIVF---ESDREGKEQLYVMQSNGSDQKRISQDKEA 347
              ++T+   I+    +  D+    + F    S R GK Q+Y+ +  G+   R++ +   
Sbjct: 20  TIRQVTDHPSIHHHPFFFVDAWDAAMAFLVLISHRTGKPQVYIEREAGAGLIRLTDEPAL 79

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           + +  + S  G  I +      K    V  +DG+ E L   DS   
Sbjct: 80  AEWSVIPSRDGRWIYYVAGQEGK---RVSPRDGTVEVLAHFDSTEM 122



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 63/195 (32%), Gaps = 21/195 (10%)

Query: 251 KRIGNFRSMILAPRFSSNG-----KRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-N 304
           +++ +  S+   P F  +         ++   +     +Y          RLT+   +  
Sbjct: 22  RQVTDHPSIHHHPFFFVDAWDAAMAFLVLISHRTGKPQVYIEREAGAGLIRLTDEPALAE 81

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK---------EASYFDPVWS 355
            S   S D   I + + +EGK    V   +G+ +     D           A+      S
Sbjct: 82  WSVIPSRDGRWIYYVAGQEGK---RVSPRDGTVEVLAHFDSTEMREAGMVGAAMGTTALS 138

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             G   A    +G+     ++  +     + +E   +  P + P    LI      G   
Sbjct: 139 ASGRYWAVPVKAGKVSQFWMIDTEAESAGVFLEAPTIGHPQFCPDDEDLIL---YAGPMT 195

Query: 416 SKLYSIDLNGRNETL 430
            +++  D  G N  +
Sbjct: 196 DRVWVTDRAGNNRRI 210



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 64/204 (31%), Gaps = 31/204 (15%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +  P+F P+ + +        D + V        R  +R  + +  I    +    + 
Sbjct: 173 PTIGHPQFCPDDEDLILYAGPMTDRVWVTDRAGNNRRIFRREHDLQ-WITHEVWRPGHRT 231

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGKEQL 328
            L     +   +I   D  S A   +T+    + +        ++V ++   DR     L
Sbjct: 232 VLFVDWPNGMGEI---DPDSGAVVPITDFPVWHGAP--DATGKRLVCDTNFPDRG----L 282

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           + +  +G+       + +A+     W+          F      + V             
Sbjct: 283 HQLDLSGAFAPSFLTEPKATSQGAHWA--------HPFPYNNGPVKVHAP---------- 324

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDG 412
                 P +SP GR ++++    G
Sbjct: 325 QHTHPHPRFSPDGRRIVYTSDASG 348



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 30/196 (15%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           +G + + + V DR G N R      D Q +    + P  + V +  + +           
Sbjct: 191 AGPMTDRVWVTDRAGNNRRIFRREHDLQWITHEVWRPGHRTVLFVDWPNGMG-----EID 245

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFI 303
               A   I +F     AP   + GKR +      +   ++ +DL    A   LT     
Sbjct: 246 PDSGAVVPITDFPVWHGAPD--ATGKRLVCDTNFPDRG-LHQLDLSGAFAPSFLTEPKAT 302

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +  A ++                  +    N    K      + ++  P +SP G  I +
Sbjct: 303 SQGAHWA------------------HPFPYNNGPVKV--HAPQHTHPHPRFSPDGRRIVY 342

Query: 364 TKFSGEKFAIGVMKKD 379
           T  +     + V    
Sbjct: 343 TSDASGFAQVFVATLS 358


>gi|303239533|ref|ZP_07326059.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2]
 gi|302592911|gb|EFL62633.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2]
          Length = 286

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 68/182 (37%), Gaps = 27/182 (14%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           PN ++++Y      +  ++YL DT   +         S      +S +G++ L +     
Sbjct: 124 PNTKEISYI-----NENKLYLFDTEKKQKTMFFDEINSYN----WSKDGRKLLYA----- 169

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D+   DL++   +          S  YS D++ I + S      ++ V+    + +  
Sbjct: 170 WGDVVEYDLKTKQKK----IYGRGYSPVYSKDNNVIAYVST---DSEIVVVDLLTNKKWV 222

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKF-----SGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            + +         +SP G  IA+           ++ I  +    + + LL++  N   P
Sbjct: 223 CTTNLVDPTTRLEFSPDGKYIAYGLQKTDIVHNPQYEIYALDFVNNNKSLLIK-GNHAVP 281

Query: 396 TW 397
            +
Sbjct: 282 AF 283



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 53/131 (40%), Gaps = 22/131 (16%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++S D  ++++         +         +K          + PV+S   ++IA+    
Sbjct: 158 NWSKDGRKLLYA-----WGDVVEYDLKTKQKK-----IYGRGYSPVYSKDNNVIAYVSTD 207

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDG---DTGSKLYS 420
                I V+    +++ +     NL  PT    +SP G+ + +  +K     +   ++Y+
Sbjct: 208 S---EIVVVDLLTNKKWVCTT--NLVDPTTRLEFSPDGKYIAYGLQKTDIVHNPQYEIYA 262

Query: 421 IDLNGRNETLI 431
           +D    N++L+
Sbjct: 263 LDFVNNNKSLL 273



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 19/142 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S + +K+ YA  D      V   D +  +             +P +S +         
Sbjct: 158 NWSKDGRKLLYAWGD------VVEYDLKTKQK-----KIYGRGYSPVYSKDNNVIAYVST 206

Query: 278 KDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFE---SDREGKEQLYVMQS 333
                +I  VDL +N     T  L        +SPD   I +    +D     Q  +   
Sbjct: 207 DS---EIVVVDLLTNKKWVCTTNLVDPTTRLEFSPDGKYIAYGLQKTDIVHNPQYEIYAL 263

Query: 334 NG-SDQKRISQDKEASYFDPVW 354
           +  ++ K +      +    +W
Sbjct: 264 DFVNNNKSLLIKGNHAVPAFIW 285



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 12/99 (12%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V++ D    +     R    + P +S +   +AY + D E    + ++D   ++      
Sbjct: 173 VVEYDLKTKQKKIYGRG---YSPVYSKDNNVIAYVSTDSE----IVVVDLLTNKKWVCTT 225

Query: 255 NFRSMILAPRFSSNGKRALISVQKDE-----AMDIYSVD 288
           N         FS +GK     +QK +       +IY++D
Sbjct: 226 NLVDPTTRLEFSPDGKYIAYGLQKTDIVHNPQYEIYALD 264


>gi|303237216|ref|ZP_07323786.1| OmpA family protein [Prevotella disiens FB035-09AN]
 gi|302482603|gb|EFL45628.1| OmpA family protein [Prevotella disiens FB035-09AN]
          Length = 704

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 60/198 (30%), Gaps = 32/198 (16%)

Query: 187 GIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVA-YATYDDEDILRVYLMDT 244
              +     M   D  N  Y T +R+             +++        DI      D 
Sbjct: 177 NSRRQDYSPMFYGDQYNELYFTSTRNDAQ--------GDEISGITGTKPGDIFVSEKDDK 228

Query: 245 RIDRAPKRIGNFRSMI---LAPRFSSNGKRALIS-----VQKDEAMDIYS---VDLQSNA 293
               AP  I +  + I     P FS +G+   I+             I      D     
Sbjct: 229 GKWGAPHTIESGLNSIADEGTPAFSPDGREMYITQCLTDATYPRFAQIAVSSRADAAWGK 288

Query: 294 TERL---TNTLFINISASYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQ---- 343
            + L    +TL      + SPD + + F SD  G +    ++ ++  G     +      
Sbjct: 289 PKPLEISRDTLSSYAHPALSPDGNWLYFVSDMPGGKGGLDIWRVRLIGGTTGGVENLGAP 348

Query: 344 -DKEASYFDPVWSPQGDL 360
            +   +   P + P GD 
Sbjct: 349 INTAGNEMFPTFRPNGDF 366



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 42/125 (33%), Gaps = 20/125 (16%)

Query: 299 NTLFINISASYSPDSSQIVFE-----SDREGKEQLYVMQSNGS-----DQKRISQDKEAS 348
           N++    + ++SPD  ++        +      Q+ V     +         IS+D  +S
Sbjct: 242 NSIADEGTPAFSPDGREMYITQCLTDATYPRFAQIAVSSRADAAWGKPKPLEISRDTLSS 301

Query: 349 YFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVED----SNLQAPTWS 398
           Y  P  SP G+ + F             + + ++         L        N   PT+ 
Sbjct: 302 YAHPALSPDGNWLYFVSDMPGGKGGLDIWRVRLIGGTTGGVENLGAPINTAGNEMFPTFR 361

Query: 399 PSGRS 403
           P+G  
Sbjct: 362 PNGDF 366



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/142 (14%), Positives = 42/142 (29%), Gaps = 18/142 (12%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIG--NFRS 258
           ++         P  SP+   + + +         DI RV L+              N   
Sbjct: 294 ISRDTLSSYAHPALSPDGNWLYFVSDMPGGKGGLDIWRVRLIGGTTGGVENLGAPINTAG 353

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--------TNTLFINISASYS 310
             + P F  NG     S        +     +  + +R          N+   +   ++ 
Sbjct: 354 NEMFPTFRPNGDFYFSSDGHGGLGGLDVFIAKVGSDKRYHIEHPGFPLNSAGDDFGLTFE 413

Query: 311 PDSSQIVFESDRE---GKEQLY 329
              ++  F S+R    G + +Y
Sbjct: 414 GKHNRGFFSSNRGDARGWDHIY 435


>gi|229194554|ref|ZP_04321356.1| Acylamino-acid-releasing enzyme [Bacillus cereus m1293]
 gi|228588916|gb|EEK46932.1| Acylamino-acid-releasing enzyme [Bacillus cereus m1293]
          Length = 488

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 8/115 (6%)

Query: 266 SSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +GK      +             +  +     +  LTN    +    +SP+S  I + 
Sbjct: 26  SDDGKNVAFVKRTANWKDNTYRNHAWIYEKGKGQSYPLTNGDIDSTCPLWSPNSRDIAYL 85

Query: 320 SDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           S    GK Q++V   +G    +I+ ++E       W+P G    +   S E   I
Sbjct: 86  SPVGNGKNQIFVKSLDGYGGVQITNEEEGISIFK-WNPTGKGFYYITQSKEFEEI 139



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +   ++ +        ++ + +     P+WSP   
Sbjct: 22  STNISDDGKNVAFVKRTANWKDNTYRNHAWIYEKGKGQSYPLT-NGDIDSTCPLWSPNSR 80

Query: 360 LIAFTKFSG-EKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G  K  I V   DG    ++  E+  +    W+P+G+   +  + 
Sbjct: 81  DIAYLSPVGNGKNQIFVKSLDGYGGVQITNEEEGISIFKWNPTGKGFYYITQS 133



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 8/92 (8%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPS 400
           +      S  G  +AF K +        +    + +K   Q   L   D +   P WSP+
Sbjct: 19  TLSSTNISDDGKNVAFVKRTANWKDNTYRNHAWIYEKGKGQSYPLTNGDIDSTCPLWSPN 78

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            R + +     G+  ++++   L+G     I 
Sbjct: 79  SRDIAYLSPV-GNGKNQIFVKSLDGYGGVQIT 109



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 45/314 (14%), Positives = 94/314 (29%), Gaps = 57/314 (18%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T    D  +       +        +   +   G    Y   + D     P +SPN + +
Sbjct: 23  TNISDDGKNVAFVKRTANWKDNTYRNHAWIYEKGKGQSYPLTNGDIDSTCPLWSPNSRDI 82

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-- 284
           AY +       ++++          +I N    I   +++  GK      Q  E  +I  
Sbjct: 83  AYLSPVGNGKNQIFVKSLD-GYGGVQITNEEEGISIFKWNPTGKGFYYITQSKEFEEIKK 141

Query: 285 --------------------YSVDLQS-----------NATERLTNTL-FINISASYSPD 312
                                 V+++            N   +LT+   F       S D
Sbjct: 142 RKELYGDFQHVGKEHQNNCLCYVEIEKVIQNDKEEREINGVYQLTDGKDFYIHDFDISND 201

Query: 313 SSQIVFESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----- 363
             ++V  +     +     LY++     + ++++ D+        +SP+G+ I +     
Sbjct: 202 GKKVVCMATPSLNDYMNGDLYILDVEAEELQKMNVDRLLG-GSVCFSPEGNKICYSASIR 260

Query: 364 ------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGS 416
                 +        I  M   G   + L    +   P  W+  G  + +       T  
Sbjct: 261 EKEYYRSHIQESTLEIYDMNT-GEVLQPLTNFDSTVMPLQWTAKGILIRW----QDKTNY 315

Query: 417 KLYSIDLNGRNETL 430
           ++  +  +G  E L
Sbjct: 316 RIGLLAEDGTMEVL 329


>gi|67902060|ref|XP_681286.1| hypothetical protein AN8017.2 [Aspergillus nidulans FGSC A4]
 gi|40740449|gb|EAA59639.1| hypothetical protein AN8017.2 [Aspergillus nidulans FGSC A4]
 gi|259480768|tpe|CBF73713.1| TPA: catabolite degradation protein, putative (AFU_orthologue;
           AFUA_5G02400) [Aspergillus nidulans FGSC A4]
          Length = 827

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 75/253 (29%), Gaps = 24/253 (9%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLC---------VMDRDGANI--RYLTPSRDQI 213
            +   +  F ++      S   G      C         + DRD   +  +         
Sbjct: 461 YLCVLRNIFMTKPAGTVPSASRGKDCYLSCQSPSLYSDHMCDRDDFPLGTKLELNKHTDE 520

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++  +FS +  K+            V + DT        +G  ++ +    +S +  +  
Sbjct: 521 VWHCQFSHDGTKLV----TAGRDSNVIIYDTSTFSVLYILGEHKNGVAHAVWSPDDTKL- 575

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           I+  +D    ++S +        +        +A ++PD    V  +  +   QL     
Sbjct: 576 ITCSRDSTARVWSTE-TGRCLLTINKHQEPVTAAVWAPDGESFV-TASLDVNSQLCHWNM 633

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNL 392
            G              +D   +P G  +        +  I V       +E +L   S  
Sbjct: 634 RGESL--YMWHGGFRVYDCAITPDGRRLIAVDV---ERKIRVYNFHTHEEEYILPLKSKA 688

Query: 393 QAPTWSPSGRSLI 405
            +   S   R ++
Sbjct: 689 TSVVVSRDSRHML 701



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 37/104 (35%), Gaps = 12/104 (11%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +S D +++V  + R+    +Y   ++      I  + +      VWSP    +       
Sbjct: 526 FSHDGTKLV-TAGRDSNVIIY--DTSTFSVLYILGEHKNGVAHAVWSPDDTKLITCSRDS 582

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIFSR 408
                 V   +    R L+  +  Q P     W+P G S + + 
Sbjct: 583 TA---RVWSTETG--RCLLTINKHQEPVTAAVWAPDGESFVTAS 621


>gi|325920954|ref|ZP_08182843.1| glutamyl peptidase [Xanthomonas gardneri ATCC 19865]
 gi|325548574|gb|EGD19539.1| glutamyl peptidase [Xanthomonas gardneri ATCC 19865]
          Length = 841

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 73/219 (33%), Gaps = 15/219 (6%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQK--DEAMD 283
            +A+       +++L+        +  G    + LA   +S + +      +     A +
Sbjct: 104 TFASSRFAFAGKLWLLSVADGSERQIAGLPSPLSLATLSWSPDQRYLAFRREDATSGANE 163

Query: 284 IYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKR 340
           ++ VD+ +    RL   L   +N    + PD S ++ +    G+       +       +
Sbjct: 164 LWLVDVAAGQARRLVAGLNTSVNDELRWLPDGSGLLVQQQVAGQGTPPTRDAVPDGPATQ 223

Query: 341 ISQDKEASYFDPVWSP----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +         P +      + D   F  ++  +  I  +     Q R +         +
Sbjct: 224 QTSAAAGVRSLPTYQDLLRNEADARVFEYYATGQPIIVSVS---GQVRPIAAPGIYLNLS 280

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            SP GR L+   ++     S +  +D   R   +++   
Sbjct: 281 VSPDGRYLL--SERSERPFSYVVPVDNFARRIEVLDLQG 317



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 24/252 (9%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRF 219
           DI +    E      RI   + +         L ++   DG+  +         L    +
Sbjct: 84  DIAEVAQPELKLAGLRIHPKTFASSRFAFAGKLWLLSVADGSERQIAGLPSPLSLATLSW 143

Query: 220 SPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQ 277
           SP+Q+ +A+   D       ++L+D    +A + +     S+    R+  +G   L+  Q
Sbjct: 144 SPDQRYLAFRREDATSGANELWLVDVAAGQARRLVAGLNTSVNDELRWLPDGSGLLVQQQ 203

Query: 278 KDEAMDIYSVDL--QSNATERLTNTLFINISASYSP----DSSQIVFESDREGKEQLYVM 331
                   + D      AT++ +    +    +Y      ++   VFE    G+  +  +
Sbjct: 204 VAGQGTPPTRDAVPDGPATQQTSAAAGVRSLPTYQDLLRNEADARVFEYYATGQPIIVSV 263

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIA----------FTKFSGEKFAIGVMKKDGS 381
                  + I+      Y +   SP G  +                     I V+   G 
Sbjct: 264 S---GQVRPIA--APGIYLNLSVSPDGRYLLSERSERPFSYVVPVDNFARRIEVLDLQGK 318

Query: 382 QERLLVEDSNLQ 393
             R + +   ++
Sbjct: 319 LVRQIAKLPLVE 330



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 7/129 (5%)

Query: 318 FESDREG-KEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFS--GEKFAI 373
           F S R     +L+++      +++I+      S     WSP    +AF +         +
Sbjct: 105 FASSRFAFAGKLWLLSVADGSERQIAGLPSPLSLATLSWSPDQRYLAFRREDATSGANEL 164

Query: 374 GVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            ++     Q R LV     S      W P G  L+  ++  G           +G     
Sbjct: 165 WLVDVAAGQARRLVAGLNTSVNDELRWLPDGSGLLVQQQVAGQGTPPTRDAVPDGPATQQ 224

Query: 431 INTPAYASD 439
            +  A    
Sbjct: 225 TSAAAGVRS 233



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 7/84 (8%)

Query: 366 FSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           F+G+ + + V   DGS+ ++  L    +L   +WSP  R L F R+      ++L+ +D+
Sbjct: 112 FAGKLWLLSV--ADGSERQIAGLPSPLSLATLSWSPDQRYLAFRREDATSGANELWLVDV 169

Query: 424 NGRNETLINTPAYAS---DPQWVG 444
                  +      S   + +W+ 
Sbjct: 170 AAGQARRLVAGLNTSVNDELRWLP 193


>gi|212538305|ref|XP_002149308.1| chromosome segregation protein (SepB), putative [Penicillium
           marneffei ATCC 18224]
 gi|210069050|gb|EEA23141.1| chromosome segregation protein (SepB), putative [Penicillium
           marneffei ATCC 18224]
          Length = 842

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 76/233 (32%), Gaps = 18/233 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    ++   D +   +  L       + +   S + Q VA A+    D L V +++   
Sbjct: 73  GAEDGTVWRYDLESGKMDKLLVRCALPVRDLAISSDGQWVAVAS----DELTVKVVNVDD 128

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--------SNATERLT 298
               K +           F  +G+   +S   D  + IYS+  +          A  RL 
Sbjct: 129 MTNVKYLREQTKGSKHVSFDPSGRFIAVSCT-DGVLYIYSIASEEPELVKKIDGAIRRLE 187

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                     + PD +   F + +  +E      S+ S QK  +           WSP G
Sbjct: 188 PEDEATSRVVWHPDGT--AFATAQATREVAIFSTSDWSPQKSFTSSHNGDITALGWSPNG 245

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            L+A     G    I + +          +  N+   +W PS   L F+    
Sbjct: 246 ALLATAGVDG---KILLWETSTQNILKRYDFGNVINLSWHPSINLLCFTTSDG 295



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 20/149 (13%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVM 331
            I   +D  +  Y  DL+S   ++L     + +   + S D   +   SD     +L V 
Sbjct: 70  FIIGAEDGTVWRY--DLESGKMDKLLVRCALPVRDLAISSDGQWVAVASD-----ELTVK 122

Query: 332 QSNGSDQKRISQDKEASYFDPVWS--PQGDLIAFTKFSGEKFAIGVM--------KKDGS 381
             N  D   +   +E +      S  P G  IA +   G  +   +         K DG+
Sbjct: 123 VVNVDDMTNVKYLREQTKGSKHVSFDPSGRFIAVSCTDGVLYIYSIASEEPELVKKIDGA 182

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
             RL  ED       W P G    F+  +
Sbjct: 183 IRRLEPEDEATSRVVWHPDGT--AFATAQ 209


>gi|332884654|gb|EGK04911.1| hypothetical protein HMPREF9456_00664 [Dysgonomonas mossii DSM
           22836]
          Length = 632

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 74/181 (40%), Gaps = 21/181 (11%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG- 324
           S +GK    +   +  M+I+   +  N   RLT+    +I+  +  ++++I+F  D  G 
Sbjct: 46  SPDGKHFSFTAPYEGRMNIFVQKVGDNTPVRLTSETERDIAGYFWGNNNRILFLKDTGGD 105

Query: 325 -KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL---IAFTKFSGEKFAIGVMKKDG 380
              QLY + ++GS+   ++  ++         P+ +    I   K + + F    +  + 
Sbjct: 106 ENFQLYGVNADGSNLLPLTAFEKVRTTIIDDLPEIESEVIIGLNKRNPQVFDPYRLNIET 165

Query: 381 SQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            +  +L E   N+Q            +    DG     +    L+G N++L+      SD
Sbjct: 166 GELTILAENPGNIQG-----------WMTDHDGKLRIAIA---LDGVNQSLLYRDKE-SD 210

Query: 440 P 440
           P
Sbjct: 211 P 211



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 1/80 (1%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            SP G   +FT     +  I V K  D +  RL  E     A  +  +   ++F +   G
Sbjct: 45  ISPDGKHFSFTAPYEGRMNIFVQKVGDNTPVRLTSETERDIAGYFWGNNNRILFLKDTGG 104

Query: 413 DTGSKLYSIDLNGRNETLIN 432
           D   +LY ++ +G N   + 
Sbjct: 105 DENFQLYGVNADGSNLLPLT 124


>gi|300787798|ref|YP_003768089.1| hypothetical protein AMED_5945 [Amycolatopsis mediterranei U32]
 gi|299797312|gb|ADJ47687.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
          Length = 326

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 56/176 (31%), Gaps = 15/176 (8%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F++R   +  +            +  DG   +    + D   +   F+ + ++     
Sbjct: 148 GTFSTRAGILDTATGDLAGTLEDYAVTLDGKPYQ----AADLNFWGVTFTRDDRRFYATM 203

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM----DIYS 286
                   V       D A   +   R  +  P  S +G R       D        +  
Sbjct: 204 STAGRRYLV-----AGDFAAHTVRTLRENVECPSLSPDGTRVAFKSAVDGDPAKGWRLSV 258

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRI 341
           +DL  +    L  T  ++   ++  D   I +   R  G   ++ + ++GS   R+
Sbjct: 259 LDLAGSKVTPLAETRSVDDQPAWL-DDHTIGYGLPRGPGHADVWSVPADGSGAARL 313



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 9/128 (7%)

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             D  G  + Y +  +G       Q  + +++   ++        T  +  +    ++  
Sbjct: 161 TGDLAGTLEDYAVTLDGKP----YQAADLNFWGVTFTRDDRRFYATMSTAGRR--YLVAG 214

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT--GSKLYSIDLNGRNETLINTPAY 436
           D +   +     N++ P+ SP G  + F    DGD   G +L  +DL G   T +     
Sbjct: 215 DFAAHTVRTLRENVECPSLSPDGTRVAFKSAVDGDPAKGWRLSVLDLAGSKVTPLAETRS 274

Query: 437 ASD-PQWV 443
             D P W+
Sbjct: 275 VDDQPAWL 282


>gi|75907562|ref|YP_321858.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75701287|gb|ABA20963.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 504

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 70/214 (32%), Gaps = 22/214 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP---KRIGNFRSMILAPRFSSNGKRALI 274
             S N Q +A A  +  D   V + + +        + + N    + A  F+ +    + 
Sbjct: 249 AISNNNQLIATAMVEGIDQNVVKVWNVKTGEERIIGEHLFNGLHRVKAVDFTPD-SNIVA 307

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S   D+ + ++ V  +      L          + SPD   +      +G   + +    
Sbjct: 308 SAGGDKNIKLWDVISERLELGTLIGHESEIRCIAISPDGKTLA---SGDGHGCIKLWDLV 364

Query: 335 G-SDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              + + I++ K          +SP    I             V   DG   + +++   
Sbjct: 365 TRKNTRTITRKKYYEKPVNSLAFSPDSKFIV-----SGSDECDVTLLDGKTGKKILKFGE 419

Query: 392 LQAPT----WSPSGRSLIFSRKKDGDTGSKLYSI 421
              P     +SP+G+ +  +     D   KL+ +
Sbjct: 420 HSEPVNLVIFSPNGQMIASASD---DCTIKLWDV 450



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 48/211 (22%), Positives = 77/211 (36%), Gaps = 33/211 (15%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V   G D+     +LWDV   +  +G       +  R IA  IS D     T   GD + 
Sbjct: 306 VASAGGDK---NIKLWDVISERLELG-TLIGHESEIRCIA--ISPD---GKTLASGDGHG 356

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR--DQILFEPRFSPNQQKVAYATYDD 233
            I                        N R +T  +  ++ +    FSP+ + +       
Sbjct: 357 CIKLWDLVTRK---------------NTRTITRKKYYEKPVNSLAFSPDSKFIV----SG 397

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            D   V L+D +  +   + G     +    FS NG+    S   D  + ++ V  ++  
Sbjct: 398 SDECDVTLLDGKTGKKILKFGEHSEPVNLVIFSPNGQMIA-SASDDCTIKLWDVQEKTEI 456

Query: 294 TERLTNTLFINISASYSPDSSQIVFES-DRE 323
            E   +T  +  S S+SPDS  +V  S DR 
Sbjct: 457 AELKGHTKAV-TSVSFSPDSQTLVSGSKDRT 486



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 63/183 (34%), Gaps = 33/183 (18%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRK---QIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           G+ +  G     +  +LWD+  RK    I  KK++  P +                    
Sbjct: 346 GKTLASGDGHGCI--KLWDLVTRKNTRTITRKKYYEKPVN-------------------S 384

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             F+    F+    VSG  +  + ++D              + +    FSPN Q +A A+
Sbjct: 385 LAFSPDSKFI----VSGSDECDVTLLDGKTGKKILKFGEHSEPVNLVIFSPNGQMIASAS 440

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D      + L D +       +      + +  FS + +  + S  KD  + ++   + 
Sbjct: 441 DD----CTIKLWDVQEKTEIAELKGHTKAVTSVSFSPDSQTLV-SGSKDRTIRLWESSIT 495

Query: 291 SNA 293
           +  
Sbjct: 496 TTG 498


>gi|229006691|ref|ZP_04164325.1| TolB domain protein [Bacillus mycoides Rock1-4]
 gi|228754552|gb|EEM03963.1| TolB domain protein [Bacillus mycoides Rock1-4]
          Length = 412

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 50/318 (15%), Positives = 112/318 (35%), Gaps = 78/318 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG N + +T    + + +P++S + + +AYA  ++++ L +Y +  R   
Sbjct: 35  RNHNLWI-KIDG-NEKQITKG--EYITKPKWSHDGKWIAYAKGEEQNQLELYCVADRKKV 90

Query: 249 APKRIGNFRSMILAPR-----------------------------------FSSNGKRAL 273
            P +     +   +P                                    +  +GK+ L
Sbjct: 91  VPSQ-TEATNYQWSPAENIIAFEFTSTLNTFDAEKKNATFENVSSGVGDYAWYPDGKKFL 149

Query: 274 ISVQ------KDEAMDIYSVDLQSN----ATERLTNTLF--------INISASYSPDSSQ 315
           +S +            +Y V   +       + L             I     +SP+   
Sbjct: 150 VSSEAQLLPTGWTGAQLYEVQKDAGMNPNKMKHLYTLPSMQEDFLAYIASDFKWSPNQKW 209

Query: 316 IVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-- 368
           I F      S       L +++++GS  +++ Q    S +   W+P  +++A+ + SG  
Sbjct: 210 IAFLAVPTASWSADSNTLCLLKADGSYFEKVDQMLLNSQW-IQWAPSKNILAYIEGSGRF 268

Query: 369 --EKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLI--------FSRKKDGDTGSK 417
             E   + V +     QE+   +       TW      +         +S +++  +   
Sbjct: 269 ALENKHLKVKELPALQQEKFTPKGYVDWDFTW-QDNELITLSRAKEMEWSNEEEKRSLPS 327

Query: 418 LYSIDLNGRNETLINTPA 435
           LY +++    +  I TP+
Sbjct: 328 LYQVNIQSNRQRQITTPS 345



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 38/84 (45%), Gaps = 10/84 (11%)

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +AF +       + + K DG  E+ + +   +  P WS  G+ + +++ ++     +LY 
Sbjct: 31  VAFIR----NHNLWI-KIDG-NEKQITKGEYITKPKWSHDGKWIAYAKGEE-QNQLELYC 83

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
           +      + ++ +   A++ QW  
Sbjct: 84  V---ADRKKVVPSQTEATNYQWSP 104


>gi|118394410|ref|XP_001029577.1| hypothetical protein TTHERM_01422370 [Tetrahymena thermophila]
 gi|89283820|gb|EAR81914.1| hypothetical protein TTHERM_01422370 [Tetrahymena thermophila SB210]
          Length = 2408

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 21/184 (11%)

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              +  +  ++ E       MD + +    ++           FSS+GK  L++       
Sbjct: 2055 GGRNTFMIWNLEKGFEFIKMDEKHNFYNTKV----------AFSSDGK--LLATTDYNFY 2102

Query: 283  DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
             I+S +       ++    F     ++S D + +V  S       +  + S     K I 
Sbjct: 2103 KIWSAERGFELINKIEAHTFGITQLAFSQDGNYLVTIS-----VDICKVWSIEKGFKLIH 2157

Query: 343  QDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
            Q +  +YF     SP    +A +        I  ++      +L+   +++   ++SP G
Sbjct: 2158 QIQGQNYFLSIAISPDSMFLAISTTQDYSLKIWNIQ---KNFQLITTINDVSQLSFSPDG 2214

Query: 402  RSLI 405
            R L 
Sbjct: 2215 RYLA 2218



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 69/190 (36%), Gaps = 9/190 (4%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSPN Q +A  + D     +++ +   ++   K I    S +    FS + K    +  
Sbjct: 1787 AFSPNDQYIATGSDD--KTCKIWSIKNGLELVNK-IEGHTSPVTQVAFSGDSKYLA-TAS 1842

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            KD+   I++++   +    L       +S ++S DS  +   S         +   +   
Sbjct: 1843 KDQTCKIWNIEKGFSLHHTLEGNNSAILSVTFSADSKYLATASF---NSLCIIWDVDKGF 1899

Query: 338  QKR--ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            Q    I+   +   F   +S  G LIA            +       + +      +Q+ 
Sbjct: 1900 QLLHSINAHDQKKIFSVAFSFDGKLIATGSEDTTCKVWNIEDGIKLIKTIQASQGWVQSV 1959

Query: 396  TWSPSGRSLI 405
             +SP+G+ L 
Sbjct: 1960 AFSPNGKYLA 1969



 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 62/195 (31%), Gaps = 13/195 (6%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              SP+   +A +T  D      Y +     +   ++    + +    FS +G+    S +
Sbjct: 2169 AISPDSMFLAISTTQD------YSLKIWNIQKNFQLITTINDVSQLSFSPDGRYLAASYK 2222

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                  I+    +      +   +      ++S D   +             +       
Sbjct: 2223 N--TFKIFDAKKKYKLLRTIQAHISNVQKITFSNDGQYLATC---GSGATCKIWSIKQKF 2277

Query: 338  QKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +  I+ + +   F +  +S     +A T  + +   I   + + S       D ++++  
Sbjct: 2278 ELEITIEGDNLEFTNLTFSADSKYLA-TASNDKTCKIWNAEHEFSLISTFKSDQSIKSIE 2336

Query: 397  WSPSGRSLIFSRKKD 411
            +S   + L  S  + 
Sbjct: 2337 FSSDNKYLALSSFEG 2351


>gi|127514196|ref|YP_001095393.1| hypothetical protein Shew_3268 [Shewanella loihica PV-4]
 gi|126639491|gb|ABO25134.1| hypothetical protein Shew_3268 [Shewanella loihica PV-4]
          Length = 333

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYF 350
               R+++    +  A++ P   Q+VF SDR G    +Y    +  +   ++   E S +
Sbjct: 56  GEPIRVSDRPGYDNQAAFGPKGKQLVFASDRAGDHNDIYRFDIDTGEITALTHTPEISEY 115

Query: 351 DPVWSPQG 358
            P  + QG
Sbjct: 116 SPRLTSQG 123



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFI-NI 305
             P R+ +         F   GK+ + +  +  +  DIY  D+ +     LT+T  I   
Sbjct: 56  GEPIRVSDRPGYDNQAAFGPKGKQLVFASDRAGDHNDIYRFDIDTGEITALTHTPEISEY 115

Query: 306 SASYSPDS 313
           S   +   
Sbjct: 116 SPRLTSQG 123



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 12/84 (14%)

Query: 362 AFTKFSGEKFAIGVMKKD----------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           A  + S   + I +              G   R+           + P G+ L+F+  + 
Sbjct: 28  ATAQVSAAGYDIWLYPLAKQAEAPHWRLGEPIRVSDRPGYDNQAAFGPKGKQLVFASDRA 87

Query: 412 GDTGSKLYSIDLN-GRNETLINTP 434
           GD    +Y  D++ G    L +TP
Sbjct: 88  GDHN-DIYRFDIDTGEITALTHTP 110


>gi|229048061|ref|ZP_04193636.1| TolB domain protein [Bacillus cereus AH676]
 gi|228723305|gb|EEL74675.1| TolB domain protein [Bacillus cereus AH676]
          Length = 399

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 83/244 (34%), Gaps = 59/244 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG   +     + + +  P++S + + +AY   + ++IL +Y +     +
Sbjct: 22  RHHNLWI-KVDGKEKQLT---KGENITGPKWSHDGEWLAYVKGEKQNILELYRL-----K 72

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 + + D++        N  F N+SA 
Sbjct: 73  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLNTFDVEKK------NADFENVSAG 122

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD    +  S+       +     G+    + +D   +               
Sbjct: 123 VGDYAWYPDGKNFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 178

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNL 392
                      WSP    I+F       +S +   + +++ DGS      + LL      
Sbjct: 179 DFLALVASGFKWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNAQWFQ 238

Query: 393 QAPT 396
            AP+
Sbjct: 239 WAPS 242



 Score = 44.2 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       + + K DG +E+ L +  N+  P WS  G  L + + +      +LY
Sbjct: 17  KVAFIRH----HNLWI-KVDG-KEKQLTKGENITGPKWSHDGEWLAYVKGEK-QNILELY 69

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 70  RLK-DGKKVTPFHS--EASNYQWSP 91


>gi|242220059|ref|XP_002475801.1| predicted protein [Postia placenta Mad-698-R]
 gi|220725005|gb|EED79014.1| predicted protein [Postia placenta Mad-698-R]
          Length = 827

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 88/276 (31%), Gaps = 51/276 (18%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPR--------FSPNQQKVAYATYDDEDILRVYLMD 243
            L  +  DG  +R+ T   + I   P         F+P + ++ +  Y   +   +    
Sbjct: 513 DLRSLVYDG--VRFSTFFSETIATGPSLVRPSALPFAPTESRL-FKLYHHPNAPTIMGGY 569

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLT 298
                   R+ +    + +  FS +G++ + S        D +  +   D+++      T
Sbjct: 570 LPQWSPALRLFDPDMKVDSLAFSPDGRQIVSSGDHAWSYFDVSDVLRVWDVEAGTEAIPT 629

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE------ASYFDP 352
             L     A++SPD +Q    S    K  +Y + +           +E      A  F  
Sbjct: 630 QPLDERSFATFSPDGTQAWAAS---AKGTIYKVDTKTGHLLSEYHMQESDGAPTAQSFAD 686

Query: 353 VWSP-QGDLIAFTKFSGEKF-------------------AIGVMKKDGSQERLLV-EDSN 391
           +W P        +K + + F                    I     + +Q +     D+ 
Sbjct: 687 LWVPFDAKETPASKSTQDLFFGPSHQRSMSDPNTHSDNQPIAKYHDELTQLQSPTYSDAQ 746

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                +S  G  ++      G     L+ +DL  R 
Sbjct: 747 FTRAAFSHDGLWVVL-----GSEDGSLWLVDLQTRT 777



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 34/108 (31%), Gaps = 21/108 (19%)

Query: 353 VWSPQGDLIAFTKFSGEKF-----AIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIF 406
            +SP G  I  +      +      + V   +   E +  +  + ++  T+SP G    +
Sbjct: 590 AFSPDGRQIVSSGDHAWSYFDVSDVLRVWDVEAGTEAIPTQPLDERSFATFSPDGTQ-AW 648

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ---------WVGF 445
           +    G     +Y +D       L       SD           WV F
Sbjct: 649 AASAKGT----IYKVD-TKTGHLLSEYHMQESDGAPTAQSFADLWVPF 691


>gi|149173063|ref|ZP_01851694.1| WD-40 repeat [Planctomyces maris DSM 8797]
 gi|148847869|gb|EDL62201.1| WD-40 repeat [Planctomyces maris DSM 8797]
          Length = 365

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 65/196 (33%), Gaps = 31/196 (15%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +   P+        R SP+Q K+A       + L V + D +  +  +        + A
Sbjct: 123 AKMTIPAHKGSARWVRVSPDQTKLATC----GNDLLVKVWDLKSGKLLQSFSGHERHVYA 178

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-------------LTNTLFINISASY 309
             F   GK+ +    +D    IY  DL++    R                 +       +
Sbjct: 179 VDFHPQGKQLV---SQDLMGVIYIWDLETGKQTRNIDASVMTGYDKKFAADMGGARDLQF 235

Query: 310 SPDSSQIV------FESDREGKEQLYVMQSN---GSDQKRISQDK--EASYFDPVWSPQG 358
           SPD S++         +   G +   +M  +   G ++ R+  DK  +   +   + P G
Sbjct: 236 SPDGSELATAGITNVVNSFAGVQDPIIMLFDWKSGQEKTRLKPDKTFQGIAWGVRYHPDG 295

Query: 359 DLIAFTKFSGEKFAIG 374
            LI        K  + 
Sbjct: 296 FLIGAGANRSGKGELW 311


>gi|157817821|ref|NP_001102766.1| WD repeat-containing protein 51A [Rattus norvegicus]
 gi|149018680|gb|EDL77321.1| rCG25766 [Rattus norvegicus]
          Length = 367

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 81/224 (36%), Gaps = 18/224 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            ++L +      +  Y        +    FSP+   +A  + D    +R+++ + + +  
Sbjct: 2   DSTLMIWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRD--KTVRIWVPNVKGEST 59

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             R     + + +  F S+G + L++   D+ + ++S   Q      LT  +     A +
Sbjct: 60  VFR--AHTATVRSVHFCSDG-QLLVTASDDKTVKVWSTHRQ-RFLFSLTQHINWVRCAKF 115

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   IV  SD    + + +      +      +         + P G  IA       
Sbjct: 116 SPDGRLIVSASD---DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNT 172

Query: 370 KFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
              +     D    RL+    +  + + A ++ PSG  LI +  
Sbjct: 173 V-KVW----DTRTHRLVQHYQLHSAAVNALSFHPSGNYLITASS 211



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 69/225 (30%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +      +  +    +    F  + Q +  A+ D      V +  T 
Sbjct: 40  SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDK----TVKVWSTH 95

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             R    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 96  RQRFLFSLTQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKTSRECVHSYCEHGGFV 152

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + I           + V  +      +  Q   A+     + P G+ +   
Sbjct: 153 TYVDFHPSGTCIAAAGM---DNTVKVWDTRTHRLVQHYQLHSAAVNALSFHPSGNYLITA 209

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 210 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 244


>gi|301055865|ref|YP_003794076.1| hypothetical protein BACI_c43420 [Bacillus anthracis CI]
 gi|300378034|gb|ADK06938.1| conserved membrane protein [Bacillus cereus biovar anthracis str.
           CI]
          Length = 410

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 86/248 (34%), Gaps = 51/248 (20%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY     +  L +Y +     +
Sbjct: 35  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSHDGEWLAYVKGKKQSNLELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K++  F S +   ++S               +  + V+ ++   E ++  +      +
Sbjct: 86  DGKKVTPFHSEVSNYQWSPTENIIAFIFT--GTLHTFKVEKKNADFENVSAGVGDY---A 140

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-------------------- 348
           + P+  + +  S+       +     G+    + +D   +                    
Sbjct: 141 WYPNGKKFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHDDFLAL 196

Query: 349 -YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWS 398
                 WSP    I+F       +S +   + +++ DGS+     ++L+     +   W+
Sbjct: 197 VASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK---WA 253

Query: 399 PSGRSLIF 406
           P+   L +
Sbjct: 254 PANNILAY 261



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAF +       + + K DG +E+ L +   +  P WS  G  L + + K   +  +LY
Sbjct: 30  KIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSHDGEWLAYVKGKK-QSNLELY 82

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++    S+ QW  
Sbjct: 83  RLK-DGKKVTPFHS--EVSNYQWSP 104


>gi|159186530|ref|NP_396122.2| peptidase [Agrobacterium tumefaciens str. C58]
 gi|159141590|gb|AAK90563.2| peptidase [Agrobacterium tumefaciens str. C58]
          Length = 633

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSP 399
           +      +     SP G L+A+      +  I V        R L   +  N+   +W+ 
Sbjct: 11  TLFGMPEFSRAQISPDGRLVAYLAPWRGRLNIWVRPVGQGTARRLTGDDTRNIDGFSWTR 70

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNG 425
             R L+F +   GD    L+ ++++G
Sbjct: 71  DTRYLLFIQDTQGDENWHLHRVEVDG 96



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 65/191 (34%), Gaps = 23/191 (12%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDRE 323
           S +G+           ++I+   +      RLT  +T  I+   S++ D+  ++F  D +
Sbjct: 24  SPDGRLVAYLAPWRGRLNIWVRPVGQGTARRLTGDDTRNIDGF-SWTRDTRYLLFIQDTQ 82

Query: 324 G--KEQLYVMQSNGSDQKR-------ISQDKEASYFDPVWS---PQGDLIAFTKFSGEKF 371
           G     L+ ++ +G++          ++            S   P    +     + +  
Sbjct: 83  GDENWHLHRVEVDGAEAVGGKARTVDLTPYSGVRVMGLELSAAFPSKAFVQMNLRTPDLI 142

Query: 372 AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY-------SIDL 423
            +  +  + ++ R+             +P+G    F     GD     Y          L
Sbjct: 143 DLYEVDIESAETRVAALNPGRFVRWIVTPNGPMHAFIINDVGDHELARYENGVFTTLAKL 202

Query: 424 NGRNETLINTP 434
           +GR++ +   P
Sbjct: 203 SGRDQPIGPMP 213



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK- 365
           A  SPD   + + +   G+  ++V        +R++ D   +     W+     + F + 
Sbjct: 21  AQISPDGRLVAYLAPWRGRLNIWVRPVGQGTARRLTGDDTRNIDGFSWTRDTRYLLFIQD 80

Query: 366 -FSGEKFAIGVMKKDGSQ 382
               E + +  ++ DG++
Sbjct: 81  TQGDENWHLHRVEVDGAE 98


>gi|159471754|ref|XP_001694021.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158277188|gb|EDP02957.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 298

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/178 (11%), Positives = 57/178 (32%), Gaps = 12/178 (6%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R         ++    S + QK+   ++D+     + + +       K +    S + +
Sbjct: 83  LRMTLEGHAAPVYGVCVSKDSQKIITCSHDE----TIRVWEIMKGNLQKTVKAHTSTVYS 138

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESD 321
              S +GK    +   D+ + ++   L +   +  L       +  +++PD  +++    
Sbjct: 139 VVLSPDGKLLA-TASADKTVKVWE--LGTGELKDTLIGHTSHVVGVAFTPDGKKLL---S 192

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               E +        +        +        +P GD   F+    +   +  +   
Sbjct: 193 SGWDETIKCWDVETGEVLHTFTGHQGKVHCVCTAPDGDTF-FSGGEDKTIKLWRISTG 249



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 71/203 (34%), Gaps = 14/203 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +        +    FSP+     +      D   V + D +            + + A  
Sbjct: 1   HTLKGHADSVTSLCFSPDS----FLLASGSDDNTVRMWDVQSGNLRTIFTGHNAKVHALN 56

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F  +G   L SV KD  +  + + L+      L            S DS +I+  S    
Sbjct: 57  FIGSGT-ILFSVSKDRTIIEWDL-LRGILRMTLEGHAAPVYGVCVSKDSQKIITCSH--- 111

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            E + V +    + ++  +   ++ +  V SP G L+A          + V +    + +
Sbjct: 112 DETIRVWEIMKGNLQKTVKAHTSTVYSVVLSPDGKLLATASADKT---VKVWELGTGELK 168

Query: 385 --LLVEDSNLQAPTWSPSGRSLI 405
             L+   S++    ++P G+ L+
Sbjct: 169 DTLIGHTSHVVGVAFTPDGKKLL 191



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 49/135 (36%), Gaps = 9/135 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N++    +    ++    SP+ + +A A+ D      V + +         +    S +
Sbjct: 123 GNLQKTVKAHTSTVYSVVLSPDGKLLATASADK----TVKVWELGTGELKDTLIGHTSHV 178

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
           +   F+ +GK+ L S   DE +  +  D+++       T           +PD     F 
Sbjct: 179 VGVAFTPDGKKLL-SSGWDETIKCW--DVETGEVLHTFTGHQGKVHCVCTAPDGDTF-FS 234

Query: 320 SDREGKEQLYVMQSN 334
              +   +L+ + + 
Sbjct: 235 GGEDKTIKLWRISTG 249


>gi|229146925|ref|ZP_04275289.1| TolB domain protein [Bacillus cereus BDRD-ST24]
 gi|228636524|gb|EEK92990.1| TolB domain protein [Bacillus cereus BDRD-ST24]
          Length = 412

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 83/244 (34%), Gaps = 59/244 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG   +     + + +  P++S + + +AY   + ++IL +Y +     +
Sbjct: 35  RHHNLWI-KVDGKEKQLT---KGENITGPKWSHDGEWLAYVKGEKQNILELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 + + D++        N  F N+SA 
Sbjct: 86  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLNTFDVEKK------NADFENVSAG 135

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD    +  S+       +     G+    + +D   +               
Sbjct: 136 VGDYAWYPDGKNFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 191

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNL 392
                      WSP    I+F       +S +   + +++ DGS      + LL      
Sbjct: 192 DFLALVASGFKWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNAQWFQ 251

Query: 393 QAPT 396
            AP+
Sbjct: 252 WAPS 255



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       + + K DG +E+ L +  N+  P WS  G  L + + +      +LY
Sbjct: 30  KVAFIRH----HNLWI-KVDG-KEKQLTKGENITGPKWSHDGEWLAYVKGEK-QNILELY 82

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 83  RLK-DGKKVTPFHS--EASNYQWSP 104


>gi|164659139|ref|XP_001730694.1| hypothetical protein MGL_2148 [Malassezia globosa CBS 7966]
 gi|159104591|gb|EDP43480.1| hypothetical protein MGL_2148 [Malassezia globosa CBS 7966]
          Length = 296

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 65/201 (32%), Gaps = 12/201 (5%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N   +    +  + +   S + Q    A++D      + L D    +  +R       +L
Sbjct: 37  NKIKILHGHNHFVSDVVISSDGQFALSASWDK----SLRLWDLNTGQTTRRFVGHTGDVL 92

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIVFE 319
           +  FS + ++ + S  +D  + ++  +   +    +T        +   +SP     V  
Sbjct: 93  SVSFSPDNRQIV-SGSRDRTIKLW--NTLGDCKFNITEDGHTEWVSCVRFSPSPQNPVIV 149

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     + + V + N           +        SP G L A     G      +   D
Sbjct: 150 S-AGWDKVVKVWELNRCKLLTNHYGHQGYINTVTISPDGSLCASGGKDGVTMLWEL--SD 206

Query: 380 GSQERLLVEDSNLQAPTWSPS 400
           G     L     + A  +SP+
Sbjct: 207 GKHLYSLEAGDVVNALVFSPN 227


>gi|332535469|ref|ZP_08411252.1| putative enzymatic protein [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035114|gb|EGI71628.1| putative enzymatic protein [Pseudoalteromonas haloplanktis ANT/505]
          Length = 787

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 73/190 (38%), Gaps = 16/190 (8%)

Query: 257 RSMILAP-RFSSNGKRALISVQKDEAMDIY--SVDLQSNAT---ERLTNTLFINISAS-- 308
                +P  ++ +G +  I ++  +  D +  +VD ++N      RL +  +I  + +  
Sbjct: 330 WGFEQSPIVWNDDGSQVAIMLEAWDNKDRWLATVDFENNKLVSQHRLHDDAWIAYAFNDF 389

Query: 309 -YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
            +  +S+ + + S+  G  QLY    NGS    ++Q +     +   +     I +    
Sbjct: 390 GWLHNSNTLYYLSEESGYSQLYKKPVNGS-ATALTQGQF-EVSNLTLTSDNSAIYYKANV 447

Query: 367 -SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID--L 423
                + I  +     +   + + + +   T SP    L+  +       ++LY  D   
Sbjct: 448 EHPGLYEIYRVNPQTGKSEQVTDLNGMTDYTLSPDETKLL-LKHSTITMPNELYVADAQA 506

Query: 424 NGRNETLINT 433
           N +   L +T
Sbjct: 507 NAKATRLTHT 516



 Score = 43.1 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 12/121 (9%), Positives = 43/121 (35%), Gaps = 12/121 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRALIS 275
           ++ +   + YA  +  + LR     +   +  +++   +   +      +S N   A  +
Sbjct: 33  WASDSATIIYAQKEQGNTLRNLFSQSVTSQTAEQVALNKLHTVGSNKAVYSKNKTMAAYT 92

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            + +    ++  +L++   +++T T        +  +   +     R+G    + +    
Sbjct: 93  FKGN----VFVKNLKTGELKQITATSANESKPQFLNNGDLVY----RQGN-VFFKVDLKT 143

Query: 336 S 336
            
Sbjct: 144 G 144



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/145 (11%), Positives = 48/145 (33%), Gaps = 9/145 (6%)

Query: 300 TLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-------EASYFD 351
                 S   ++ D SQ+    +    +  ++   +  + K +SQ +         ++ D
Sbjct: 329 DWGFEQSPIVWNDDGSQVAIMLEAWDNKDRWLATVDFENNKLVSQHRLHDDAWIAYAFND 388

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             W    + + +         +     +GS   L      +   T +    ++ +    +
Sbjct: 389 FGWLHNSNTLYYLSEESGYSQLYKKPVNGSATALTQGQFEVSNLTLTSDNSAIYYKANVE 448

Query: 412 GDTGSKLYSIDL-NGRNETLINTPA 435
                ++Y ++   G++E + +   
Sbjct: 449 HPGLYEIYRVNPQTGKSEQVTDLNG 473


>gi|119498931|ref|XP_001266223.1| small nucleolar ribonucleoprotein complex subunit (Pwp2), putative
           [Neosartorya fischeri NRRL 181]
 gi|119414387|gb|EAW24326.1| small nucleolar ribonucleoprotein complex subunit (Pwp2), putative
           [Neosartorya fischeri NRRL 181]
          Length = 986

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 91/237 (38%), Gaps = 23/237 (9%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D   I  L+ S+  I F    + + + +A+ +     +L V+   +      K+ G+  
Sbjct: 367 PDFNPIHQLSVSQSNIDFV-TVNKSGEWLAFGSSKHGQLL-VWEWQSE-SYILKQQGHLD 423

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQI 316
           SM  A  +S +G++ + +   D  + ++  D++S       T       +  ++   S +
Sbjct: 424 SMN-ALAYSPDGQKIV-TAADDGKVKVW--DVKSGFCIVTFTEHSSGVTACQFAKKGS-V 478

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +F +  +G  + + +     + +  +     S+      P G++I     S + F I V 
Sbjct: 479 LFTASLDGSVRAWDL-IRYRNFRTFTAPSRTSFTSLAVDPSGEVI--CAGSPDSFDIHVW 535

Query: 377 KKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                  +LL + S  + P     ++  G  L+      G     +    + GR +T
Sbjct: 536 SVQTG--QLLDQLSGHEGPVSSLAFAADGNHLV-----SGSWDRTVRVWSIFGRTQT 585


>gi|324998971|ref|ZP_08120083.1| protease [Pseudonocardia sp. P1]
          Length = 192

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 56/183 (30%), Gaps = 24/183 (13%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G    ++      + +++    S A                +PD           G 
Sbjct: 4   SPDGGAVALTTHDGRLLVLHTGVPASGAE---------------NPDGV----VDGAAGD 44

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQER 384
               V +    + + +++      FD VWSP    +A+          + + + D     
Sbjct: 45  GATAVPERAAGELRELARGAAGEPFDVVWSPDSSWLAWCDPTEAGLSRVVLTRLDDGGHT 104

Query: 385 LLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQW 442
            +       + P ++  G+ L F  ++  D     +S DL  G        P  A  P  
Sbjct: 105 EVTHGRFHDSDPAFTADGKHLAFLSRRVFDPSYDQHSFDLTFGTGWKPFLVPLAARTP-- 162

Query: 443 VGF 445
             F
Sbjct: 163 SPF 165



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 3/93 (3%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R L        F+  +SP+   +A+    +  + RV L         + + + R     
Sbjct: 57  LRELARGAAGEPFDVVWSPDSSWLAWCDPTEAGLSRVVLTRLDDGGHTE-VTHGRFHDSD 115

Query: 263 PRFSSNGKRALISVQK--DEAMDIYSVDLQSNA 293
           P F+++GK      ++  D + D +S DL    
Sbjct: 116 PAFTADGKHLAFLSRRVFDPSYDQHSFDLTFGT 148



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 8/66 (12%), Positives = 19/66 (28%), Gaps = 1/66 (1%)

Query: 258 SMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                  +S +          +     +    L       +T+  F +   +++ D   +
Sbjct: 66  GEPFDVVWSPDSSWLAWCDPTEAGLSRVVLTRLDDGGHTEVTHGRFHDSDPAFTADGKHL 125

Query: 317 VFESDR 322
            F S R
Sbjct: 126 AFLSRR 131


>gi|297685335|ref|XP_002820248.1| PREDICTED: WD repeat-containing protein 38-like isoform 1 [Pongo
           abelii]
          Length = 315

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 8/160 (5%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +  T   R  K  G     + +  FS +G+  L +  +D  +  +          RL   
Sbjct: 5   VPATLAVRRVKFFGQHGGEVNSSAFSPDGQMLL-TGSEDGCVYGWET-RSGQLLWRLGGH 62

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   +SPD       S       + +     +   R+ +  + S     +SP    
Sbjct: 63  TGPVKFCRFSPDGHLFASASC---DYTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQ 119

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSP 399
           +A   +        V    G   RLLV   + +Q+  +SP
Sbjct: 120 LASGGWDKRVMLWEVQS--GQMLRLLVGHRDSVQSSDFSP 157



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 12/178 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    FSP+ Q +   + D      VY  +TR  +   R+G     +   RF
Sbjct: 16  FFGQHGGEVNSSAFSPDGQMLLTGSEDG----CVYGWETRSGQLLWRLGGHTGPVKFCRF 71

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G     S   D  + ++ V  ++     L        + S+SPDS Q+         
Sbjct: 72  SPDG-HLFASASCDYTVRLWDV-ARAKCLRVLKGHQRSVETVSFSPDSRQLA---SGGWD 126

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +++ + +       R+      S     +SP  + +A   +      I +        
Sbjct: 127 KRVMLWEVQSGQMLRLLVGHRDSVQSSDFSPTVNCLATGSWDST---IRIWDLRTGTP 181



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 74/227 (32%), Gaps = 21/227 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D   A    +     + +    FSP+ +++A   +D     RV L + +
Sbjct: 80  SASCDYTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDK----RVMLWEVQ 135

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT----ERLTNTL 301
             +  + +   R  + +  FS        +   D  + I+  DL++       + L    
Sbjct: 136 SGQMLRLLVGHRDSVQSSDFSPTVNCLA-TGSWDSTIRIW--DLRTGTPAVSHQALEGHS 192

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  YS         +     + +++ +   S      +          +SP    +
Sbjct: 193 GNISCLCYSASG----LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWL 248

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLI 405
           A    +G    + V   +  +    ++   L       ++P G+ L+
Sbjct: 249 A---SAGYSRMVKVWDCNTGKCLETLKQGVLDVAHTCAFTPDGKILV 292


>gi|198275377|ref|ZP_03207908.1| hypothetical protein BACPLE_01539 [Bacteroides plebeius DSM 17135]
 gi|198271713|gb|EDY95983.1| hypothetical protein BACPLE_01539 [Bacteroides plebeius DSM 17135]
          Length = 741

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 66/193 (34%), Gaps = 35/193 (18%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------ 274
           P       +    ++   V +         K   +    + +  F ++ K+ L+      
Sbjct: 59  PAGGYDIVSYTPGKNKREVLIP---ASMFVKPGTSDTLSVRSFSFDTSHKQVLVYTNTRR 115

Query: 275 SVQKDEAMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             + D   D + +++++    +L         + A +SPD +++ + S       +YV  
Sbjct: 116 VWRYDTRGDYWVLNMETGKLRQLGVLLPESSLMFAKFSPDGTRVAYVS----GNNIYVEY 171

Query: 333 SNGSDQKRISQDKEASYFDP----------------VWSPQGDLIAFTKFSGEK---FAI 373
            +     +++ D  ++  +                  WSP G  IA+ +   E    F I
Sbjct: 172 VSDGKVVQLTHDGSSTIVNGTFDWVYEEEFSCRDGFRWSPDGKYIAYWQSDTEGTGWFDI 231

Query: 374 GVMKKDGSQERLL 386
            +   D    ++L
Sbjct: 232 -INNVDSLYPKIL 243



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 79/263 (30%), Gaps = 66/263 (25%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             YD      V  M+T   R    +    S++ A +FS +G R           +IY   
Sbjct: 117 WRYDTRGDYWVLNMETGKLRQLGVLLPESSLMFA-KFSPDGTRVAYVS----GNNIYVEY 171

Query: 289 LQSNATERLTNTLFI-----------------NISASYSPDSSQIVF-ESDREGKEQLYV 330
           +      +LT+                          +SPD   I + +SD EG     +
Sbjct: 172 VSDGKVVQLTHDGSSTIVNGTFDWVYEEEFSCRDGFRWSPDGKYIAYWQSDTEGTGWFDI 231

Query: 331 MQSNGSDQKRISQ---------------------DKEASYFDPVWSPQGDLIAFTKFSGE 369
           + +  S   +I +                       E ++ D    P+ + I    F  E
Sbjct: 232 INNVDSLYPKILRFPYPKAGTTNSAVKVGYVAASGGETTWIDLPGDPRQNYIMRMDFIPE 291

Query: 370 KFAIGVMKKD---------------GSQERLLVEDSNLQA-----PTWSPSGRSLIFSRK 409
              + + + +               G+ + +L E            TW  +     +  +
Sbjct: 292 SNDLFIQQMNRPQNTNKVWLATIGGGAPKNILTETDAAWVETNDQVTWLKNNTYFTWQSE 351

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           + G     LY +  +G++   I 
Sbjct: 352 RSG--WRHLYRVSRDGKDIQPIT 372



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 46/135 (34%), Gaps = 31/135 (22%)

Query: 308 SYSPDSSQ---IVFESDR-----EGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQG 358
           S+S D+S    +V+ + R     + +   +V+       +++     E+S     +SP G
Sbjct: 97  SFSFDTSHKQVLVYTNTRRVWRYDTRGDYWVLNMETGKLRQLGVLLPESSLMFAKFSPDG 156

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL------------------QAPTWSPS 400
             +A+   +     I V      +   L  D +                       WSP 
Sbjct: 157 TRVAYVSGN----NIYVEYVSDGKVVQLTHDGSSTIVNGTFDWVYEEEFSCRDGFRWSPD 212

Query: 401 GRSLIFSRKKDGDTG 415
           G+ + + +     TG
Sbjct: 213 GKYIAYWQSDTEGTG 227



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 43/156 (27%), Gaps = 11/156 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-----GNFRSMILAPRFSSNGKRAL 273
           F P    +     +         + T    APK I       +        +  N     
Sbjct: 288 FIPESNDLFIQQMNRPQNTNKVWLATIGGGAPKNILTETDAAWVETNDQVTWLKNNTYFT 347

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ--IVFESDREGKEQLYVM 331
              ++     +Y V       + +T   F  I      D  +  + F +  +   Q Y+ 
Sbjct: 348 WQSERSGWRHLYRVSRDGKDIQPITKGEFDFIEQVGM-DVKKGLVYFIASPDNYTQRYLY 406

Query: 332 QSN---GSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +      + KR+S   E        SP G     T
Sbjct: 407 SAELLGKGEVKRLSPMDEQGQHRYDLSPDGKYAVHT 442


>gi|149280292|ref|ZP_01886414.1| 3-carboxymuconate cyclase-like protein [Pedobacter sp. BAL39]
 gi|149228981|gb|EDM34378.1| 3-carboxymuconate cyclase-like protein [Pedobacter sp. BAL39]
          Length = 370

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 79/241 (32%), Gaps = 26/241 (10%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L     DGA+  Y+   +D +L     + +   ++    +    L       +       
Sbjct: 102 LNKQPTDGADPCYIIADKDNVLTA---NYSGGSISVFGIEKNGSLSSLKQLIKHSGKSID 158

Query: 253 IGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---- 307
               +   +   +F+ + +  ++     + + +Y  +    +   LT +  +NI+     
Sbjct: 159 TARQKGPHVHMVQFTPDHQHVVVDDLGTDKVYLYQYNSTGGSQT-LTASDSVNITPGAGP 217

Query: 308 ---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--------QDKEASYFDPVWSP 356
               +S DS       + +G   + V     +  + I          + E    D   SP
Sbjct: 218 RHIVFSNDSKHAYLVHEMDGG--ITVFSYESNKLQEIQKAKMTEEGFNGENGGADIHISP 275

Query: 357 QGDLI-AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDG 412
            G  + A  + S  K  I  +  DG       + +  + P      P+G+ L+   +   
Sbjct: 276 DGKFLYASNRGSENKITIFAIGTDGKLTVKGYQSTLGKGPRNFVIDPTGKYLLVGHQYTN 335

Query: 413 D 413
           D
Sbjct: 336 D 336


>gi|115480854|ref|NP_001064020.1| Os10g0104500 [Oryza sativa Japonica Group]
 gi|78707607|gb|ABB46582.1| Notchless, putative, expressed [Oryza sativa Japonica Group]
 gi|113638629|dbj|BAF25934.1| Os10g0104500 [Oryza sativa Japonica Group]
 gi|222612317|gb|EEE50449.1| hypothetical protein OsJ_30462 [Oryza sativa Japonica Group]
          Length = 480

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 64/155 (41%), Gaps = 13/155 (8%)

Query: 182 ESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    ++ + +       +       +++    FSP+ Q +A A++D      V 
Sbjct: 337 ERLVSGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDK----SVK 392

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTN 299
           L +    +         + +    +S++  R L+S  KD  + ++  D+++   ++ L  
Sbjct: 393 LWNGITGKFVAAFRGHVADVYQISWSAD-SRLLLSGSKDSTLKVW--DIRTRKLKQDLPG 449

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                 +  +SPD  ++       GK+++  +  N
Sbjct: 450 HADEVYAVDWSPDGEKVA----SGGKDRVLKLWMN 480



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 52/173 (30%), Gaps = 19/173 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + +    FSP+ + +A  + D      V   D             ++ +L   +S +
Sbjct: 113 GHTEAVLAVSFSPDGRCLASGSGDT----TVRFWDLSTQTPLFTCKGHKNWVLCIAWSPD 168

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP-----DSSQIVFESD 321
           G   + S  K   + ++  D ++       LT       + S+ P        + V  S 
Sbjct: 169 GNHLV-SGSKSGELILW--DPKTGKQLGTPLTGHRKWITAVSWEPVHLQSPCRRFVSTS- 224

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++G  +++                  S     W   G  + +T        + 
Sbjct: 225 KDGDARIW--DMTTRKCVIALTGHTNSVTCVKWGGDG--LIYTGSEDCSIKVW 273



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 49/132 (37%), Gaps = 6/132 (4%)

Query: 232 DDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L +  I + PK R+   + ++    FS +G+    S   D+++ +++  + 
Sbjct: 341 SGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLA-SASFDKSVKLWN-GIT 398

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                     +      S+S DS  ++  S       L V        K+         +
Sbjct: 399 GKFVAAFRGHVADVYQISWSADSRLLLSGSK---DSTLKVWDIRTRKLKQDLPGHADEVY 455

Query: 351 DPVWSPQGDLIA 362
              WSP G+ +A
Sbjct: 456 AVDWSPDGEKVA 467



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 43/150 (28%), Gaps = 11/150 (7%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++   +      R+T    +     +SPD   +   S     + + +  
Sbjct: 339 LVSGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASF---DKSVKLWN 395

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +   A  +   WS    L+           + V      + +  +     
Sbjct: 396 GITGKFVAAFRGHVADVYQISWSADSRLLLSGSKDST---LKVWDIRTRKLKQDLPGHAD 452

Query: 393 QAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
           +     WSP G  +        D   KL+ 
Sbjct: 453 EVYAVDWSPDGEKVA---SGGKDRVLKLWM 479



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 79/260 (30%), Gaps = 42/260 (16%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+   +   +   +    +      
Sbjct: 132 SGSGDTTVRFWDLSTQTPLFTCKGHKNWVLCIAWSPDGNHLVSGS---KSGELILWDPKT 188

Query: 246 IDRAPKRIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQ------SNA 293
             +    +   R  I A  +      S    R  +S  KD    I+ +  +      +  
Sbjct: 189 GKQLGTPLTGHRKWITAVSWEPVHLQSP--CRRFVSTSKDGDARIWDMTTRKCVIALTGH 246

Query: 294 TERLTNTLFINISASY--SPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKE 346
           T  +T   +      Y  S D S  V+E+ +       +   + + S     + + +   
Sbjct: 247 TNSVTCVKWGGDGLIYTGSEDCSIKVWETSQGKLVKTLQGHGHWVNSLALSTEYVLRTGA 306

Query: 347 ASYFDPVWSPQGDL----IA-FTKFSGE----------KFAIGVMKKDGSQE---RLLVE 388
             +    +S   ++    +A + K  G            F + + +   S++   R+   
Sbjct: 307 YDHTGKTYSTAEEMKEAALARYKKMRGNAPERLVSGSDDFTMFLWEPTISKQPKARMTGH 366

Query: 389 DSNLQAPTWSPSGRSLIFSR 408
              +    +SP G+ L  + 
Sbjct: 367 QKLVNHVYFSPDGQWLASAS 386


>gi|288923094|ref|ZP_06417244.1| WD-40 repeat protein [Frankia sp. EUN1f]
 gi|288345557|gb|EFC79936.1| WD-40 repeat protein [Frankia sp. EUN1f]
          Length = 1655

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 69/213 (32%), Gaps = 18/213 (8%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----RFSSNGKRALI 274
            S +  ++              L D    R P +IG+ R            FSS+G+    
Sbjct: 1419 SRDGSRLVVGDNRGGFT----LWDVSDPRHPAQIGSRRDAHPGAGYVLTAFSSDGRFVA- 1473

Query: 275  SVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +  KD  + ++   DL +     +     I     ++P  S +         + + V  +
Sbjct: 1474 TAAKDGLVRLWRASDLAAGPLGEV-KYDGIPEDLEFAPTGSLLAVGGSSRRVQLIEVSAA 1532

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SN 391
            +      ++       F   +SP G  +  +   G    +  +  D   +  LV +    
Sbjct: 1533 SELTTVGMTAPARELVFGIGFSPDGTRLLVS---GADLKMWNVDADHRADPELVANLVGG 1589

Query: 392  LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               P +SP GR    +      TG     +D +
Sbjct: 1590 GSTPVFSPDGRY-ALAAGGGNATGVFWLPVDAD 1621



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 69/235 (29%), Gaps = 58/235 (24%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---------FSSN 268
             FSP    +A   Y       V L D     AP  +G       A           FS +
Sbjct: 1041 AFSPTGDVLAVGGYGT----TVRLFDVGAPAAPSPLGVLGGPEAALSHTKPVRDIEFSPD 1096

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-----------------ISASYSP 311
            G R + +   D    ++S    + A   L    + +                 +S ++S 
Sbjct: 1097 GTRIV-TGGLDGRAILWSAPNGTAAARPLAELPWPDDPELQEALEAVRSRELRVSVAFSR 1155

Query: 312  DSSQIVFE----------------------SDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            D + + +                       S   G +   ++   G     +S     S 
Sbjct: 1156 DENAVYYTCAGYLCRSGLDGADGAPAPAEYSYVTGTKTKDLVSLGGGSVAVVSDLNRISL 1215

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             +P WS     +A        +AI V   DG       +D++L+   W   G  +
Sbjct: 1216 LNPAWSSD--ELAAWSLERHGWAIAV-SPDGRHVVTGADDTDLRFHRW--DGAMI 1265



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 67/202 (33%), Gaps = 24/202 (11%)

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +A    +  D  +          A +  G   + I A  +S +G + + +   D    ++
Sbjct: 902  LALTAEEIADTAQARSAILGSLPATRLRGVHTAPIGAVAYSPDG-QLVATGSDDATAALW 960

Query: 286  S-VDLQSNATERLTNTLFINI------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            +  + Q     RL   L  +       S ++S D   +      +G  QL+ +       
Sbjct: 961  NGAEPQQGLISRLPRYLGPDGKQYAVKSVAFSRDGRTLA-VGMADGVAQLWNIADPRHPV 1019

Query: 339  KRIS-------QDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKD------GSQE 383
             + +          E   +   +SP GD++A   +      F +G           G  E
Sbjct: 1020 LQAALPRAATETGLETGVYGLAFSPTGDVLAVGGYGTTVRLFDVGAPAAPSPLGVLGGPE 1079

Query: 384  RLLVEDSNLQAPTWSPSGRSLI 405
              L     ++   +SP G  ++
Sbjct: 1080 AALSHTKPVRDIEFSPDGTRIV 1101



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 30/73 (41%), Gaps = 5/73 (6%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+  ++  +  D +    ++ +D      P+ + N       P FS +G+ AL +   
Sbjct: 1553 FSPDGTRLLVSGADLK----MWNVDADHRADPELVANLVGGGSTPVFSPDGRYALAAGGG 1608

Query: 279  DEAMDIYS-VDLQ 290
            +     +  VD  
Sbjct: 1609 NATGVFWLPVDAD 1621


>gi|259480956|tpe|CBF74056.1| TPA: small nucleolar ribonucleoprotein complex subunit (Pwp2),
           putative (AFU_orthologue; AFUA_5G03090) [Aspergillus
           nidulans FGSC A4]
          Length = 851

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 74/188 (39%), Gaps = 17/188 (9%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A+ +     +L V+   +      K+ G+  SM  A  +S +G+R + +   D  +
Sbjct: 307 GEWLAFGSSKFGQLL-VWEWQSE-SYILKQQGHLDSMN-ALAYSPDGQRIV-TAADDGKI 362

Query: 283 DIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++  D++S       T       +  +S   + ++F S  +G  + + +     + +  
Sbjct: 363 KVW--DVKSGFCLVTFTEHTSGVTACQFSKKGN-VLFTSSLDGSVRAWDL-IRYRNFRTF 418

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TW 397
           +     S+      P G++I     S + F I V        +LL + S  + P     +
Sbjct: 419 TAPSRLSFSSLAVDPSGEVI--CAGSPDSFDIHVWSVQTG--QLLDQLSGHEGPVSALAF 474

Query: 398 SPSGRSLI 405
           +  G  L+
Sbjct: 475 AADGNHLL 482



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 65/199 (32%), Gaps = 18/199 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ Q++  A  D +    + + D +            S + A +FS  G   L +  
Sbjct: 345 AYSPDGQRIVTAADDGK----IKVWDVKSGFCLVTFTEHTSGVTACQFSKKGN-VLFTSS 399

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D ++  + + ++       T    ++ S S + D S  V  +       ++V       
Sbjct: 400 LDGSVRAWDL-IRYRNFRTFTAPSRLSFS-SLAVDPSGEVICAGSPDSFDIHVWSVQTGQ 457

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK--KDGSQERLLVE------- 388
                   E       ++  G+ +       +   +  +   +D S  R + +       
Sbjct: 458 LLDQLSGHEGPVSALAFAADGNHLLTFWSVADAVQVAGIDGRRDISGGRKITDRTTAANA 517

Query: 389 --DSNLQAPTWSPSGRSLI 405
               +    T+S  G  ++
Sbjct: 518 AGTKSFHCITYSADGSCIL 536


>gi|158300631|ref|XP_320491.4| AGAP012029-PA [Anopheles gambiae str. PEST]
 gi|157013253|gb|EAA00688.4| AGAP012029-PA [Anopheles gambiae str. PEST]
          Length = 378

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 65/193 (33%), Gaps = 10/193 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ + ++  + D    +++++     +    R     S + +  F   GK+ L +   
Sbjct: 64  WSPDGRIISTVSKD--RSVKIWVPSMLGNSDEFR--GHTSNVRSVDFDPTGKKLL-TASD 118

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D+ + ++ V  +       T        A +SP+   I    D      L +        
Sbjct: 119 DKTVKLWKVSRK-QFLSSFTGHTNWVRCARFSPNGKLIASCGD---DRTLKLFDPATGQC 174

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                D++ +     W P   L+A       +  I  +      +   + D  + +  + 
Sbjct: 175 VHSFYDQKGAGCKVAWHPDSTLVA-IALDNCRVKIFDINIRKLIQYYRIYDGPVNSLDFH 233

Query: 399 PSGRSLIFSRKKD 411
           PSG  LI      
Sbjct: 234 PSGNYLITGSDDG 246



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 63/212 (29%), Gaps = 24/212 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +   RFSPN + +A       D   + L D    +      + +       + 
Sbjct: 136 FTGHTNWVRCARFSPNGKLIASC----GDDRTLKLFDPATGQCVHSFYDQKGAGCKVAWH 191

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQIVFESDR 322
            +     I++     + I+ +++      +L     I         + P  + ++  SD 
Sbjct: 192 PDSTLVAIALDNC-RVKIFDINI-----RKLIQYYRIYDGPVNSLDFHPSGNYLITGSD- 244

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G  ++  +      Q               +S  G L A T        +     D   
Sbjct: 245 DGVTKI--IDLLEGRQIFTLTGHRGPVTTVKFSKDGQLFA-TGSDDCHVMLWKANLDNDS 301

Query: 383 ERL---LVEDSNLQ--APTWSPSGRSLIFSRK 409
            +      E S+ +   P  S   R L F+R 
Sbjct: 302 AQNSLYTPEGSSCESTHPAAS-DQRKLSFNRD 332


>gi|149279354|ref|ZP_01885485.1| hypothetical protein PBAL39_13587 [Pedobacter sp. BAL39]
 gi|149229880|gb|EDM35268.1| hypothetical protein PBAL39_13587 [Pedobacter sp. BAL39]
          Length = 937

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 62/192 (32%), Gaps = 6/192 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                ++   +   D    +    S    LF P  S + + +       ++   +  +D 
Sbjct: 374 PRYRQRSYSIICSYDMKYKKMKKLSSKSRLFSPSLSADGKTIVAVQIGLDNQSNLVELDA 433

Query: 245 RIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                     N  ++IL  P F ++  + +     +    + +V+ +S    ++      
Sbjct: 434 ASGTITHTYPNPYNLILQTPAFRTDKNQVVFVAVSEAGKSLMTVE-RSGKMTQIIAASNQ 492

Query: 304 NIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +S   Y      I F +   G + +Y +         +S  K  + F+   +     I 
Sbjct: 493 QLSRPIYVSQG--IAFNAHYNGIDNIYYIVPGEQKISALSASKYGA-FNATPTADQQHIV 549

Query: 363 FTKFSGEKFAIG 374
           F  +S   + I 
Sbjct: 550 FNNYSLGGYEIA 561



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 21/211 (9%)

Query: 216 EPRFSPNQQKVAY--ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKR 271
           +P FS     + +    YD     R Y +    D   K++    S     +P  S++GK 
Sbjct: 355 QPWFSYANGIIVWDEIRYDPRYRQRSYSIICSYDMKYKKMKKLSSKSRLFSPSLSADGKT 414

Query: 272 A-LISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-----ASYSPDSSQIVFESDREGK 325
              + +  D   ++  +D  S     +T+T     +      ++  D +Q+VF +  E  
Sbjct: 415 IVAVQIGLDNQSNLVELDAASGT---ITHTYPNPYNLILQTPAFRTDKNQVVFVAVSEAG 471

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + L  ++ +G    +I          P++  QG  IAF         I  +     +   
Sbjct: 472 KSLMTVERSG-KMTQIIAASNQQLSRPIYVSQG--IAFNAHYNGIDNIYYIVPGEQKISA 528

Query: 386 LVE---DSNLQAPTWSPSGRSLIFSRKKDGD 413
           L      +    PT     + ++F+    G 
Sbjct: 529 LSASKYGAFNATPT--ADQQHIVFNNYSLGG 557


>gi|53712269|ref|YP_098261.1| dipeptidyl peptidase IV [Bacteroides fragilis YCH46]
 gi|52215134|dbj|BAD47727.1| dipeptidyl peptidase IV [Bacteroides fragilis YCH46]
 gi|301161982|emb|CBW21526.1| putative dipeptidyl peptidase [Bacteroides fragilis 638R]
          Length = 736

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 55/455 (12%), Positives = 135/455 (29%), Gaps = 113/455 (24%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F+        + I     +P  + +    A+     +      + + V   
Sbjct: 26  DLKEINSGKFSP-------ENIYGVVPMPDGEHYTQRNAEGTQIVKYSFRTGEPVEV--- 75

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             L+  +    
Sbjct: 76  VFDVTKARECPFKKFDSYQFSPDGSKILIATETKPIYRHSYT-----AVHYLYPVKRNDK 130

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   VA+   ++     ++L+    
Sbjct: 131 GVTTNNIVEKLSDGGPQQ-----------APVFSPDGNLVAFVRDNN-----IFLVKLLY 174

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALI-------------- 274
             +  ++                          A  F+++                    
Sbjct: 175 GNSESQVTEDGKLNSVLNGIPDWVYEEEFGFNRALEFNADNTMLAYVRFDESEVPSYTFP 234

Query: 275 -------------------------SVQKDEAMDIYSVDLQSNATERL---TNTLFINIS 306
                                    +   +  + +++ D++S  T ++    +       
Sbjct: 235 LFAGEAPRYDALQDYPGEYTYKYPKAGYPNSKVSVHTFDIKSKVTRQVKLPIDADGYIPR 294

Query: 307 ASYSPDSSQIV-FESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDP------VWSPQG 358
             ++ D +++     +R + +  +Y      +  K   +D+   Y +        + P  
Sbjct: 295 IRFTQDPNKLAIMTLNRHQNRFDMYFADPRSTVCKLALRDESPYYINENVFDNIQFYP-- 352

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGS 416
           +  +F         +     +G+  + +   +        W+P      ++  ++     
Sbjct: 353 EYFSFVSDKSGYPHLYWYSMNGNLIKQVTNGNYEVKNFIGWNPDTNEFYYTSNEESPMRQ 412

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWV----GFMD 447
            +Y ID  G+   L N P   S P +      FM+
Sbjct: 413 AVYKIDRKGKKMKLSNQPGTNS-PIFSSSMKYFMN 446



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SD+ G   LY    NG+  K+++           W+P  +   +T          V K
Sbjct: 357 FVSDKSGYPHLYWYSMNGNLIKQVTNGNYEVKNFIGWNPDTNEFYYTSNEESPMRQAVYK 416

Query: 378 KDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTP 434
            D   +++ L       +P +S       F  K        L ++ D  G+    + T 
Sbjct: 417 IDRKGKKMKLSNQPGTNSPIFS--SSMKYFMNKFTSLDTPMLITLNDNTGKVLKTLVTN 473



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 84/245 (34%), Gaps = 42/245 (17%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y     + G  NS++   +  + S + +     +D DG   R             RF+ +
Sbjct: 253 YTYKYPKAGYPNSKVSVHTFDIKSKVTRQVKLPIDADGYIPRI------------RFTQD 300

Query: 223 QQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGN----------FRSMILAPR-FSSNGK 270
             K+A  T    ++   +Y  D R       + +          F ++   P  FS    
Sbjct: 301 PNKLAIMTLNRHQNRFDMYFADPRSTVCKLALRDESPYYINENVFDNIQFYPEYFS---- 356

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--YSPDSSQIVFESDREG--KE 326
                  K     +Y   +  N  +++TN     +     ++PD+++  + S+ E   ++
Sbjct: 357 ---FVSDKSGYPHLYWYSMNGNLIKQVTNGN-YEVKNFIGWNPDTNEFYYTSNEESPMRQ 412

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTKFSGEKFAIGVMKKDGSQER 384
            +Y +   G   K +S     +   P++S         FT        I +    G   +
Sbjct: 413 AVYKIDRKGKKMK-LSNQPGTN--SPIFSSSMKYFMNKFTSLD-TPMLITLNDNTGKVLK 468

Query: 385 LLVED 389
            LV +
Sbjct: 469 TLVTN 473


>gi|312130150|ref|YP_003997490.1| peptidase s9b dipeptidylpeptidase iv domain protein [Leadbetterella
           byssophila DSM 17132]
 gi|311906696|gb|ADQ17137.1| peptidase S9B dipeptidylpeptidase IV domain protein [Leadbetterella
           byssophila DSM 17132]
          Length = 744

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 58/171 (33%), Gaps = 25/171 (14%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFINISA 307
           P+ I N  S+   P++ ++ K  L    +    + + + L +       +        S 
Sbjct: 269 PELIANQYSLSF-PQWRADSKALLFEYNQRGHQNYHVLRLDTENGKVTEVIK----ESSP 323

Query: 308 SYSP-DSSQI----------VFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWS 355
           ++      +           ++ S+R+G   LY+  +     K +I++ K          
Sbjct: 324 TFFHYSGKKFLHYAQKTEELIWMSERDGWNHLYLYDAKSGKVKNQITKGKWVVRKVIKVD 383

Query: 356 PQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                I F     EK           +  DGS  R+L  ++     T+SP 
Sbjct: 384 EASRRIIFEGSGREKGQDPYFIQYYSVSFDGSDFRVLTNENGNHRATFSPD 434



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 82/255 (32%), Gaps = 40/255 (15%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMI 260
            RY    RD+    P  SP+++  AY          VY+      ++ K +         
Sbjct: 141 ERYWGSLRDEREGNPILSPDKKWKAYI-----KNSNVYISKVDDPKSEKALSFDGSPGEY 195

Query: 261 LAP--RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIV 317
            +    +S + K    +  +     + ++         + ++    +     + D  +  
Sbjct: 196 YSAFLSWSPDSKYIYSTRIRPGGKRVLTL---------IESSPSDQLQPKLHTRDYLKP- 245

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQD---KEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              D   ++   V     +    +S +    + S   P W      + F           
Sbjct: 246 --GDALNQKYPVVFDIEKNKTYEVSPELIANQYSLSFPQWRADSKALLFEYNQRGHQNYH 303

Query: 375 VMKKDGSQERLLVEDSNLQAPT-WSPSGRS----------LIFSRKKDGDTGSKLYSIDL 423
           V++ D    ++  E     +PT +  SG+           LI+  ++DG   + LY  D 
Sbjct: 304 VLRLDTENGKV-TEVIKESSPTFFHYSGKKFLHYAQKTEELIWMSERDG--WNHLYLYDA 360

Query: 424 -NGRNETLINTPAYA 437
            +G+ +  I    + 
Sbjct: 361 KSGKVKNQITKGKWV 375



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 69/202 (34%), Gaps = 20/202 (9%)

Query: 240 YLMDTRIDRAPKRIGNFRSM-----ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            L D     AP+R   +           P  S + K       K+  + I  VD    + 
Sbjct: 127 QLTDKGNINAPQRPERYWGSLRDEREGNPILSPDKKWKAYI--KNSNVYISKVD-DPKSE 183

Query: 295 ERLTN----TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           + L+       + +   S+SPDS  I     R G +++  +  +    +   +     Y 
Sbjct: 184 KALSFDGSPGEYYSAFLSWSPDSKYIYSTRIRPGGKRVLTLIESSPSDQLQPKLHTRDYL 243

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            P     GD  A  +     F I   K       L+    +L  P W    ++L+F   +
Sbjct: 244 KP-----GD--ALNQKYPVVFDIEKNKTYEVSPELIANQYSLSFPQWRADSKALLFEYNQ 296

Query: 411 DGDTGSKLYSIDL-NGRNETLI 431
            G     +  +D  NG+   +I
Sbjct: 297 RGHQNYHVLRLDTENGKVTEVI 318


>gi|154492348|ref|ZP_02031974.1| hypothetical protein PARMER_01982 [Parabacteroides merdae ATCC
           43184]
 gi|154087573|gb|EDN86618.1| hypothetical protein PARMER_01982 [Parabacteroides merdae ATCC
           43184]
          Length = 1315

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 26/147 (17%)

Query: 268 NGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFE---- 319
           +G R + +  Q D+  +IY V+L     + L      ++     +Y PD   I       
Sbjct: 414 DGDRVMFTQTQDDKRWNIYEVNLDGTGFKPLVENDEPDLEFYDGTYLPDGRVIAISNIGY 473

Query: 320 --------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                   SD  G   LY         +R++ D++A++ +PV    G  + +T++     
Sbjct: 474 QGVPCVNGSDAVGNMVLY--DPKDKSMRRLTFDQDANW-NPVIMNNGR-VMYTRWEYTDL 529

Query: 372 AIGV------MKKDGSQERLLVEDSNL 392
                     M  DG++ + L     +
Sbjct: 530 THYYSRIVMHMNPDGTENKALYGSGAM 556



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 16/101 (15%)

Query: 357 QGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRK-- 409
            GD + FT+    +++ I  +  DG+  + LVE    D      T+ P GR +  S    
Sbjct: 414 DGDRVMFTQTQDDKRWNIYEVNLDGTGFKPLVENDEPDLEFYDGTYLPDGRVIAISNIGY 473

Query: 410 ------KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                    D    +   D   ++   +    +  D  W  
Sbjct: 474 QGVPCVNGSDAVGNMVLYDPKDKSMRRLT---FDQDANWNP 511


>gi|25091532|sp|Q26544|WSL17_SCHMA RecName: Full=WD repeat-containing protein SL1-17
 gi|1002672|gb|AAC46896.1| G protein beta subunit-like; Method: conceptual translation
           supplied by author [Schistosoma mansoni]
          Length = 301

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/261 (13%), Positives = 85/261 (32%), Gaps = 19/261 (7%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +YQ      G  +  I        S  + + + + D +   +           +   FSP
Sbjct: 54  LYQFEGHRLGVISVDINSTGTLAASSSLDSQILLWDLETGRLTKTYDGDPADTWTIAFSP 113

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +A  ++       V +++ +  +    I      +    + S+G +   +   +  
Sbjct: 114 DSRFLATGSHTG----CVNMINVQTAQKEGSIQLEGKFVYXLAYISDGSKLA-AGTINGL 168

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKR 340
           + I   DL++ + + L        S S+SPD   +   SD    +Q+ V    +G     
Sbjct: 169 VSIC--DLETGSVQFLDGHATPVRSVSFSPDGRLLASASD---DKQIKVFDVRDGRLVIP 223

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWS 398
                +       ++     +          ++ +      +E+      +  +    +S
Sbjct: 224 SLNGHKGWVVSVDFASDNRHLVTASTD---CSVRIWDLASKEEKHCFNTHEDQVWCARYS 280

Query: 399 PSGRSLIFSRKKDGDTGSKLY 419
           P G ++I       D    +Y
Sbjct: 281 PQGNNII---SVGDDRSIMIY 298



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 59/166 (35%), Gaps = 21/166 (12%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY----SPDSSQIVFESDREGKEQ 327
              S   D  + ++  DL++    RLT T   + + ++    SPDS  +   S       
Sbjct: 75  LAASSSLDSQILLW--DLETG---RLTKTYDGDPADTWTIAFSPDSRFLATGSHTGCVNM 129

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + V  +      ++  + +  Y     S  G  +A    +G    + +   +    + L 
Sbjct: 130 INVQTAQKEGSIQL--EGKFVYXLAYIS-DGSKLAAGTING---LVSICDLETGSVQFLD 183

Query: 388 EDSN-LQAPTWSPSGRSLIFSRKKD-----GDTGSKLYSIDLNGRN 427
             +  +++ ++SP GR L  +              +L    LNG  
Sbjct: 184 GHATPVRSVSFSPDGRLLASASDDKQIKVFDVRDGRLVIPSLNGHK 229


>gi|85712092|ref|ZP_01043145.1| Dipeptidyl peptidase IV [Idiomarina baltica OS145]
 gi|85694082|gb|EAQ32027.1| Dipeptidyl peptidase IV [Idiomarina baltica OS145]
          Length = 831

 Score = 54.3 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 68/192 (35%), Gaps = 17/192 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I++     +  +    +   ++ +A   +  + + +   +            N    +  
Sbjct: 379 IQWNEEGSEVAVMLEAWDNKERWIATVDFGAKQLEQQDRLHDDAWINYTH--NEFGWV-- 434

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD- 321
                +        + D    +Y+ DL    T +LT   ++  + + S DSSQ+ F+++ 
Sbjct: 435 -----DEDTLWFMSEADGYSHLYARDLD-QQTTQLTEGQYVVETPTLSADSSQLYFQANQ 488

Query: 322 -REGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKK 378
              G  ++Y +  +G S+ ++++            SP  + +  T  +      + V   
Sbjct: 489 PHPGIYEIYRVAVDGSSEPEQLTDLG--GMTGYELSPTSERLLLTYSTPLMPPELYVKNA 546

Query: 379 D-GSQERLLVED 389
           D   + + L   
Sbjct: 547 DATDEAQRLTHT 558



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/149 (12%), Positives = 48/149 (32%), Gaps = 9/149 (6%)

Query: 296 RLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           +L         A  ++ + S++    +    ++ ++   +   ++   QD+        +
Sbjct: 367 QLMADWGWENGAIQWNEEGSEVAVMLEAWDNKERWIATVDFGAKQLEQQDRLHDDAWINY 426

Query: 355 SP------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           +         D + F   +     +     D    +L      ++ PT S     L F  
Sbjct: 427 THNEFGWVDEDTLWFMSEADGYSHLYARDLDQQTTQLTEGQYVVETPTLSADSSQLYFQA 486

Query: 409 KKDGDTGSKLYSIDLNG--RNETLINTPA 435
            +      ++Y + ++G    E L +   
Sbjct: 487 NQPHPGIYEIYRVAVDGSSEPEQLTDLGG 515


>gi|315043346|ref|XP_003171049.1| vegetative incompatibility protein HET-E-1 [Arthroderma gypseum CBS
            118893]
 gi|311344838|gb|EFR04041.1| vegetative incompatibility protein HET-E-1 [Arthroderma gypseum CBS
            118893]
          Length = 1481

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/273 (14%), Positives = 85/273 (31%), Gaps = 45/273 (16%)

Query: 191  NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD------DEDILRVYLMDT 244
             +L + D                +    FSP+ + +A A+              V L D 
Sbjct: 883  TTLQLWDVITGTCISGFGGHRNQVNAVTFSPDGRLLASASGYTLLQGLQPKDTVVRLWDI 942

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +   + +   R  I +  FS++  + L SV  D    ++ +               I 
Sbjct: 943  ATESCIQTLTGHRHPIQSIAFSAD-SKLLSSVSSDGTALVWDL------------YSGIP 989

Query: 305  ISA--------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD--KEASYFDPVW 354
            I          ++SP + QI      + +  + ++         ++       S     +
Sbjct: 990  IGPALKGFKFVTFSPKTRQIA---SLQDEFAISILDIETG-TGILTHGALHTNSITSITF 1045

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDG 412
            SP G  +A          + +           +E       +  ++P G S+I + +   
Sbjct: 1046 SPDGSYLASASKDNT---VKMWDVATGACIKTLEGHLNSVNSVAFAPDGSSIISASR--- 1099

Query: 413  DTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
            D+  K++ I  +           + + P +V F
Sbjct: 1100 DSTVKVWDIVSD----RTTGFEGHDTPPTFVTF 1128



 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 88/242 (36%), Gaps = 30/242 (12%)

Query: 218  RFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--- 273
              SP    +A A +  ++D+  + L D          G  R+ + A  FS +G+      
Sbjct: 863  AISPGGGLLAVAASNREDDLTTLQLWDVITGTCISGFGGHRNQVNAVTFSPDGRLLASAS 922

Query: 274  -ISVQKDEAMDIYSV---DLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
              ++ +        V   D+ + +  + LT       S ++S DS  +   S        
Sbjct: 923  GYTLLQGLQPKDTVVRLWDIATESCIQTLTGHRHPIQSIAFSADSKLL---SSVSSDGTA 979

Query: 329  YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
             V           +      +    +SP+   IA  +   ++FAI ++  +     L   
Sbjct: 980  LVWDLYSGIPIGPALKG---FKFVTFSPKTRQIASLQ---DEFAISILDIETGTGILTHG 1033

Query: 388  --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASD 439
                +++ + T+SP G  L  + K   D   K++ +      +TL      +N+ A+A D
Sbjct: 1034 ALHTNSITSITFSPDGSYLASASK---DNTVKMWDVATGACIKTLEGHLNSVNSVAFAPD 1090

Query: 440  PQ 441
              
Sbjct: 1091 GS 1092



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 49/332 (14%), Positives = 100/332 (30%), Gaps = 72/332 (21%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK-------------GDFNS 175
            RLWD+     I  +         + IA +    +  S++ +              G    
Sbjct: 938  RLWDIATESCI--QTLTGHRHPIQSIAFSADSKLLSSVSSDGTALVWDLYSGIPIGPALK 995

Query: 176  RILFVSESVVS---GIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
               FV+ S  +     +++   +   D   G  I          +    FSP+   +A A
Sbjct: 996  GFKFVTFSPKTRQIASLQDEFAISILDIETGTGILTHGALHTNSITSITFSPDGSYLASA 1055

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            + D+     V + D       K +    + + +  F+ +G    IS  +D  + ++ +  
Sbjct: 1056 SKDN----TVKMWDVATGACIKTLEGHLNSVNSVAFAPDGSSI-ISASRDSTVKVWDIVS 1110

Query: 290  QSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                  R T     +      ++S D S ++  S+   K   +    NG+       +  
Sbjct: 1111 D-----RTTGFEGHDTPPTFVTFSLDGSLLL--SEVTSKLSRW---LNGTTLPPPRSNPH 1160

Query: 347  ASYFDPVW-SPQGDLIAFTKFSGEKF--AIGVMK-------------------------- 377
              Y   ++ SP    +     + ++F   I V                            
Sbjct: 1161 NPYTKHIFLSPDCKRLVTIPGAPDEFYSRIQVWDVKSGAYIKIFENQATPVAPTRPQQVT 1220

Query: 378  ----KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  G   R      ++ + ++SP    L 
Sbjct: 1221 LWDTTSGDCLRRFQPGFSVGSASFSPDSNRLA 1252



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 43/280 (15%), Positives = 84/280 (30%), Gaps = 32/280 (11%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSP 221
           +    +R+L     +V       L  + RD    R +  +R  I   P         F+P
Sbjct: 710 RIRETTRMLGALLDLVDWKRSPRLWALLRDAQ--RGILMNRSIIDEYPLQIYCSAITFAP 767

Query: 222 NQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK- 278
              +V   + +     I  +  +D   +   +     +       FS +G   + +    
Sbjct: 768 ETSEVRNIFKSQLPRWITLLPRVDADWNPCVQTFEGIQGDNSIATFSPDGSHIVTASSNK 827

Query: 279 ----DEAMDIYSVDL---QSNATERLTNTLFINISASYSPDSSQIVF-ESDREGK-EQLY 329
               D    + ++ +    +N     T+   I+ S + SP    +    S+RE     L 
Sbjct: 828 IQFWDTMSGVCTISMTIYDNNIAMDKTSNCHID-SIAISPGGGLLAVAASNREDDLTTLQ 886

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFSG-----EKFAIGVMKKDG 380
           +                       +SP G L+A    +T   G         +  +  + 
Sbjct: 887 LWDVITGTCISGFGGHRNQVNAVTFSPDGRLLASASGYTLLQGLQPKDTVVRLWDIATES 946

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             + L      +Q+  +S   + L             LYS
Sbjct: 947 CIQTLTGHRHPIQSIAFSADSKLLSSVSSDGTALVWDLYS 986


>gi|118341407|gb|AAI27950.1| WD repeat domain 38 [Homo sapiens]
 gi|119608005|gb|EAW87599.1| hCG29224 [Homo sapiens]
 gi|223462559|gb|AAI50646.1| WD repeat domain 38 [Homo sapiens]
          Length = 314

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 69/198 (34%), Gaps = 11/198 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    FSP+ Q +   + D      VY  +TR  +   R+G     +   RF
Sbjct: 16  FFGQHGGEVNSSAFSPDGQMLLTGSEDG----CVYGWETRSGQLLWRLGGHTGPVKFCRF 71

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G     S   D  + ++ V  ++     L        + S+SPDS Q+         
Sbjct: 72  SPDG-HLFASASCDCTVRLWDV-ARAKCLRVLKGHQRSVETVSFSPDSRQLA---SGGWD 126

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQE 383
           +++ +         R+      S     +SP  + +A   +      + + ++    S +
Sbjct: 127 KRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVRIWDLRMVTPAVSHQ 186

Query: 384 RLLVEDSNLQAPTWSPSG 401
            L     N+    +S SG
Sbjct: 187 ALEGHSGNISCLCYSASG 204



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 8/160 (5%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +  T   R  K  G     + +  FS +G+  L +  +D  +  +          RL   
Sbjct: 5   VPATLAVRRVKFFGQHGGEVNSSAFSPDGQMLL-TGSEDGCVYGWET-RSGQLLWRLGGH 62

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   +SPD       S       + +     +   R+ +  + S     +SP    
Sbjct: 63  TGPVKFCRFSPDGHLFASASC---DCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQ 119

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSP 399
           +A   +        V    G   RLLV   + +Q+  +SP
Sbjct: 120 LASGGWDKRVMLWDVQS--GQMLRLLVGHRDSIQSSDFSP 157



 Score = 37.3 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 62/194 (31%), Gaps = 32/194 (16%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQI---IGKKFFSSPAS---------------------WR 152
            +           LWDV+  + +   +G +     +                       R
Sbjct: 118 RQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVRIWDLR 177

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
            +   +S   +Q++ G  G+ +      S  + SG    ++ +     +++         
Sbjct: 178 MVTPAVS---HQALEGHSGNISCLCYSASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVT 234

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +    FSP++  +A A Y       V + D    +  + +     +     F+ +GK  
Sbjct: 235 WVKSIAFSPDELWLASAGYSR----MVKVWDCNTGKCLETLKGVLDVAHTCAFTPDGK-I 289

Query: 273 LISVQKDEAMDIYS 286
           L+S   D+     S
Sbjct: 290 LVSGAADQTRRQIS 303



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 72/224 (32%), Gaps = 16/224 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D   A    +     + +    FSP+ +++A   +D     RV L D +
Sbjct: 80  SASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDK----RVMLWDVQ 135

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFI 303
             +  + +   R  I +  FS        +   D  + I+ + + + A     L      
Sbjct: 136 SGQMLRLLVGHRDSIQSSDFSPTVNCLA-TGSWDSTVRIWDLRMVTPAVSHQALEGHSGN 194

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                YS         +     + +++ +   S      +          +SP    +A 
Sbjct: 195 ISCLCYSASG----LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLA- 249

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
              +G    + V   +  +    ++          ++P G+ L+
Sbjct: 250 --SAGYSRMVKVWDCNTGKCLETLKGVLDVAHTCAFTPDGKILV 291


>gi|219521698|gb|AAI71828.1| WDR38 protein [Homo sapiens]
          Length = 315

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 69/198 (34%), Gaps = 11/198 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    FSP+ Q +   + D      VY  +TR  +   R+G     +   RF
Sbjct: 16  FFGQHGGEVNSSAFSPDGQMLLTGSEDG----CVYGWETRSGQLLWRLGGHTGPVKFCRF 71

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G     S   D  + ++ V  ++     L        + S+SPDS Q+         
Sbjct: 72  SPDG-HLFASASCDCTVRLWDV-ARAKCLRVLKGHQRSVETVSFSPDSRQLA---SGGWD 126

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQE 383
           +++ +         R+      S     +SP  + +A   +      + + ++    S +
Sbjct: 127 KRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVRIWDLRMVTPAVSHQ 186

Query: 384 RLLVEDSNLQAPTWSPSG 401
            L     N+    +S SG
Sbjct: 187 ALEGHSGNISCLCYSASG 204



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 8/160 (5%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +  T   R  K  G     + +  FS +G+  L +  +D  +  +          RL   
Sbjct: 5   VPATLAVRRVKFFGQHGGEVNSSAFSPDGQMLL-TGSEDGCVYGWET-RSGQLLWRLGGH 62

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   +SPD       S       + +     +   R+ +  + S     +SP    
Sbjct: 63  TGPVKFCRFSPDGHLFASASC---DCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQ 119

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSP 399
           +A   +        V    G   RLLV   + +Q+  +SP
Sbjct: 120 LASGGWDKRVMLWDVQS--GQMLRLLVGHRDSIQSSDFSP 157



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 17/225 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D   A    +     + +    FSP+ +++A   +D     RV L D +
Sbjct: 80  SASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDK----RVMLWDVQ 135

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFI 303
             +  + +   R  I +  FS        +   D  + I+ + + + A     L      
Sbjct: 136 SGQMLRLLVGHRDSIQSSDFSPTVNCLA-TGSWDSTVRIWDLRMVTPAVSHQALEGHSGN 194

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                YS         +     + +++ +   S      +          +SP    +A 
Sbjct: 195 ISCLCYSASG----LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLA- 249

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLI 405
              +G    + V   +  +    ++   L       ++P G+ L+
Sbjct: 250 --SAGYSRMVKVWDCNTGKCLETLKQGVLDVAHTCAFTPDGKILV 292


>gi|312130599|ref|YP_003997939.1| hypothetical protein Lbys_1884 [Leadbetterella byssophila DSM
           17132]
 gi|311907145|gb|ADQ17586.1| hypothetical protein Lbys_1884 [Leadbetterella byssophila DSM
           17132]
          Length = 389

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 57/131 (43%), Gaps = 6/131 (4%)

Query: 294 TERLTNT-LFINISASY---SPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             +LT+T   ++ +  +    P   ++     D +G++Q+  + ++  + K ++    + 
Sbjct: 254 PRQLTHTEKGLSSTRHWLRAHPSGEKLYALAKDPKGQDQIAEISASSGELKLLTSLPYSI 313

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            +    + +G  IAF   +     I +   D    +  +E   + AP +SP+G+ L++++
Sbjct: 314 DYTFNLNSEGTHIAFVG-NNAVHIIELKTLDTIVLQTPIEGKIVGAPHFSPNGKDLVYNQ 372

Query: 409 KKDGDTGSKLY 419
             +      L 
Sbjct: 373 YINDQLQILLV 383



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 44/143 (30%), Gaps = 27/143 (18%)

Query: 293 ATERLTNTLFINI---SASYSPDSSQIVFESD-----REGKEQLYVMQSNGSDQKRISQD 344
             + LT +   +    +  +S D   IVF+             + V+      ++ I   
Sbjct: 12  TPKVLTTSPGGHTLHHNGVFSRDGRYIVFDGRNDDTKMGENNYIGVVDLKEGGERVIYYS 71

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIG-----VMKKDGSQERLLVEDSNLQAP---- 395
                    +SP  D + F    G  + I       +        + ++  +L+AP    
Sbjct: 72  PRPGVGAASFSPVEDKVIFIHGVG-NYGISNRTGVAVDLKNPMHGIFMDARDLKAPYAPG 130

Query: 396 ---------TWSPSGRSLIFSRK 409
                     WSP G  L F+  
Sbjct: 131 SLRGGTHSHMWSPDGNMLSFTYN 153



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 24/146 (16%)

Query: 246 IDRAPKRIGNFRSMIL---APRFSSNGKRALISVQKDE-----AMDIYSVDLQSNATERL 297
           I   PK +              FS +G+  +   + D+        I  VDL+      +
Sbjct: 9   IMVTPKVLTTSPGGHTLHHNGVFSRDGRYIVFDGRNDDTKMGENNYIGVVDLKEGGERVI 68

Query: 298 TNTLFINIS-ASYSPDSSQIVF--------ESDREG-------KEQLYVMQSNGSDQKRI 341
             +    +  AS+SP   +++F         S+R G             M +        
Sbjct: 69  YYSPRPGVGAASFSPVEDKVIFIHGVGNYGISNRTGVAVDLKNPMHGIFMDARDLKAPYA 128

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFS 367
                      +WSP G++++FT   
Sbjct: 129 PGSLRGGTHSHMWSPDGNMLSFTYND 154



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 48/331 (14%), Positives = 103/331 (31%), Gaps = 70/331 (21%)

Query: 168 GEKGDFNSRILFVSESVVSGIIK----NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              G F+    ++     +   K    N + V+D      R +  S    +    FSP +
Sbjct: 26  HHNGVFSRDGRYIVFDGRNDDTKMGENNYIGVVDLKEGGERVIYYSPRPGVGAASFSPVE 85

Query: 224 QKVAY--------------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            KV +                 D ++ +    MD R  +AP   G+ R    +  +S +G
Sbjct: 86  DKVIFIHGVGNYGISNRTGVAVDLKNPMHGIFMDARDLKAPYAPGSLRGGTHSHMWSPDG 145

Query: 270 KRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSP----------------- 311
                +        ++ +V +   +  +       N    YS                  
Sbjct: 146 NMLSFTYNDALVDPELRTVGVMFPSNVQAEEGEGNNSGTYYSYLVAEVGKGGKLEKAFDE 205

Query: 312 ---DSSQIVFESDREGKEQLYVMQSNGSD-------------------QKRISQDKEASY 349
              D + I F+   E K ++Y+++                         ++++  ++   
Sbjct: 206 CWLDQNTIAFQGLSEDKIEVYLVKVEAKTADEAIGERGQRPQVPSFIRPRQLTHTEKGLS 265

Query: 350 FDPVW---SPQGDLI-AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--GRS 403
               W    P G+ + A  K    +  I  +     + +LL         T++ +  G  
Sbjct: 266 STRHWLRAHPSGEKLYALAKDPKGQDQIAEISASSGELKLLTSLPYSIDYTFNLNSEGTH 325

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           + F         + ++ I+L   +  ++ TP
Sbjct: 326 IAFV------GNNAVHIIELKTLDTIVLQTP 350


>gi|307180203|gb|EFN68236.1| WD repeat-containing protein 61 [Camponotus floridanus]
          Length = 327

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 72/201 (35%), Gaps = 24/201 (11%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            T   +D ++V+ +     +   ++      +++   SS+G +            +   D
Sbjct: 53  VTGSVDDTVKVWELRNGALKMKHKLTGHSLGVVSIAVSSDGSKCA---SSSLDSSLKLWD 109

Query: 289 LQSNATERLTNTLFINISAS------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           LQS    +L     I +         +SPD   IV  S   GK  LY  + +G  ++ + 
Sbjct: 110 LQSGD--KL---SSIEVGPVDIWTVVFSPDDKFIVSGSH-AGKIHLYGTE-SGKQEQTLD 162

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPS 400
                      +SP G  IA     G    I +      +    +E   +  ++  +SP 
Sbjct: 163 TRGGKFTLSVAYSPDGKYIASGAIDG---IINIFDVAYGKVLRTLEGHAMPIRSLCFSPD 219

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
            + L+ +     D   KLY +
Sbjct: 220 SQLLLTASD---DGHMKLYDV 237



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 13/133 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   + L     +      +SP+ + +A    D      + + D    +  + +      
Sbjct: 155 GKQEQTLDTRGGKFTLSVAYSPDGKYIASGAIDG----IINIFDVAYGKVLRTLEGHAMP 210

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQI 316
           I +  FS +  + L++   D  M +Y V   +L       ++      +  S+SPDS Q 
Sbjct: 211 IRSLCFSPD-SQLLLTASDDGHMKLYDVKDANLAGT----MSGHASWVLGVSFSPDSQQF 265

Query: 317 VFESDREGKEQLY 329
              S  +   +++
Sbjct: 266 A-SSSSDHTVKIW 277


>gi|302886703|ref|XP_003042241.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256723150|gb|EEU36528.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 638

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 56/162 (34%), Gaps = 22/162 (13%)

Query: 265 FSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           F+ +G          E    D+++V LQ+    RLTN        ++SPD+  +     R
Sbjct: 296 FNGDGTELTYVGSNIESCNNDVFAVHLQTGVVRRLTNHPEYPDPLAFSPDNKWVAVMDTR 355

Query: 323 EGKEQLYV---------MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                +++         +   G      S++     F   +     L+ F    G  +  
Sbjct: 356 GSGRNMFIAGMRGIPPLVDIVGGILPASSRNNGLRRFFQPY-----LLDFYGDRGNYYG- 409

Query: 374 GVMKKD-----GSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
             +  D     GS      E + +  P WSP  R L+F +  
Sbjct: 410 QKINGDNNGVPGSGAINDPEWNGMADPRWSPDSRQLVFWQTH 451



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 49/155 (31%), Gaps = 13/155 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+ +  ++ Y   + E                +R+ N         FS + K   +   +
Sbjct: 296 FNGDGTELTYVGSNIESCNNDVFAVHLQTGVVRRLTNHPEYPDPLAFSPDNKWVAVMDTR 355

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------SDREGKEQLYVM 331
               +++   ++      L + +   + AS   +  +  F+        DR G      +
Sbjct: 356 GSGRNMFIAGMRG--IPPLVDIVGGILPASSRNNGLRRFFQPYLLDFYGDR-GNYYGQKI 412

Query: 332 QSNGSDQKR---ISQDKEASYFDPVWSPQGDLIAF 363
             + +       I+  +     DP WSP    + F
Sbjct: 413 NGDNNGVPGSGAINDPEWNGMADPRWSPDSRQLVF 447


>gi|229013572|ref|ZP_04170705.1| TolB domain protein [Bacillus mycoides DSM 2048]
 gi|228747732|gb|EEL97602.1| TolB domain protein [Bacillus mycoides DSM 2048]
          Length = 403

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 82/254 (32%), Gaps = 43/254 (16%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            ++S I     + V      +  +  + G   + +T    + +  P++S N + +AYA  
Sbjct: 7   FYSSSITSAENNGVKVAFIRNHNLWIKVGEKEKQITKG--EYITGPKWSHNGEWLAYAKG 64

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              +   +Y +     +  K++   +S +   ++S           +     + + D + 
Sbjct: 65  KKRNHFELYRL-----KDGKKVRPSQSEVSNYQWSPTENIIAFVFAR----TLNTFDAEK 115

Query: 292 NAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV----------MQSNGSDQK 339
                E + N +      ++ PD  + +  S+       +              N    K
Sbjct: 116 KKADFENIANGVGDY---AWYPDGKKFLVSSEAYLLPTGWTGAQLYEIQKDANMNPHKMK 172

Query: 340 RISQDKEASY-------FDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS-----Q 382
            +S                  WSP    I+F        S +   + +++ DGS      
Sbjct: 173 HLSALPNEHDDFLALVGSGFNWSPDQKWISFLAVPTASLSADSNTLCLIRSDGSRFETVD 232

Query: 383 ERLLVEDSNLQAPT 396
           + LL       AP+
Sbjct: 233 QMLLNTQWFKWAPS 246



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 74/203 (36%), Gaps = 40/203 (19%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG +      ++  + I          +++T   +I     +S +   + +   ++ +  
Sbjct: 18  NGVKVAFI--RNHNLWIKV----GEKEKQITKGEYI-TGPKWSHNGEWLAYAKGKK-RNH 69

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLL 386
             + +     + R SQ + ++Y    WSP  ++IAF    +   F     K D   E + 
Sbjct: 70  FELYRLKDGKKVRPSQSEVSNY---QWSPTENIIAFVFARTLNTFDAEKKKAD--FENIA 124

Query: 387 VEDSNLQAPTWSPSGRSLIFSRK----KDGDTGSKLYSI--DLNGRNETLINTPA----- 435
               +     W P G+  + S +      G TG++LY I  D N     + +  A     
Sbjct: 125 NGVGDY---AWYPDGKKFLVSSEAYLLPTGWTGAQLYEIQKDANMNPHKMKHLSALPNEH 181

Query: 436 ------------YASDPQWVGFM 446
                       ++ D +W+ F+
Sbjct: 182 DDFLALVGSGFNWSPDQKWISFL 204


>gi|227538150|ref|ZP_03968199.1| possible outer membrane protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227241993|gb|EEI92008.1| possible outer membrane protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 628

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 74/246 (30%), Gaps = 39/246 (15%)

Query: 215 FEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSNG 269
           + P+ + + + + +   T + E+    +       +A K  G+  S      A   S +G
Sbjct: 171 YFPKLTADNRTIIFTRKTANQENFYESHYDGKIWSQAQKLTGHINSDQFNEGAHCISPDG 230

Query: 270 KRALISV----QKDEAMDIYSVDLQSN---ATERL---TNTLFINISASYSPDSSQIVFE 319
           K    +         + DIY    ++        L    N+       + S D   + F 
Sbjct: 231 KYLFFTGCNWPNGMGSCDIYISKKENGIWGEPYNLGAPINSKGWESQPAISADGRTLYFV 290

Query: 320 SDREGKEQLY-----VMQSNGSDQKRISQDKEASY----FDPVWSPQGDLIAFTKFSGEK 370
           S+R G    Y      + +       ++   + +       P        + F       
Sbjct: 291 SNRPGGVGGYDIWKSTLNAAEEWSAPVNLGPQINTVFDESAPYIHADNSSLFFASNGWPG 350

Query: 371 F---AIGVMKKDGSQERLLVEDSNLQAP----------TWSPSGRSLIFSRKKDGDTGSK 417
           F    I V K D           NL  P            S +G+    S + DG     
Sbjct: 351 FGRKDIFVSKSD--SLNKWSAPVNLGHPINNYYEQNALYVSMNGKMGFLSTQIDGQQQLD 408

Query: 418 LYSIDL 423
           +YS D+
Sbjct: 409 IYSFDI 414


>gi|307152399|ref|YP_003887783.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306982627|gb|ADN14508.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 1444

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 48/293 (16%), Positives = 100/293 (34%), Gaps = 18/293 (6%)

Query: 156  HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
            HT+   ++     E+  ++  I    + V+SG   N++ V D    ++ +     +  ++
Sbjct: 1061 HTLC-LVHTFTGHERAVYSVAISDDGQFVISGSSDNTVWVWDLHTLSLVHTFTGHESYVY 1119

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
                S + Q V   + D      V + D R              +     S +G + ++S
Sbjct: 1120 SVAISEDGQFVVSGSKDK----TVRVWDLRNLCLVHTFTGHERSVDTVAISQDG-QFVVS 1174

Query: 276  VQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               D  + ++  DL + +     T       S + S D   +V  S+      L V    
Sbjct: 1175 GSSDNTLRVW--DLHTLSLVHTFTGHESSVYSVAISEDGQFVVSGSE---DNTLRVWDLR 1229

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                       E S      S  G  +  +  S +   +  +            +S++ +
Sbjct: 1230 NLCLVHTFTGHERSVDTVAISEDGQFVV-SGSSDKTVRVWDLHTLSLVHTFTGHESSVYS 1288

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDL----NGRNETLINTPAYASDPQWV 443
               S  G+ ++            L+++ L     G +E  ++T A + D Q+V
Sbjct: 1289 VAISEDGQFVVSGSSDKTVRVWDLHTLSLVHTFTG-HERSVDTVAISEDGQFV 1340


>gi|29841234|gb|AAP06266.1| similar to GenBank Accession Number U30261 G protein beta
           subunit-like [Schistosoma japonicum]
          Length = 319

 Score = 54.3 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 85/261 (32%), Gaps = 19/261 (7%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           ++Q      G  +  I        S  + + + + D +   +           +   FSP
Sbjct: 72  LHQFEGHRLGVISVDINSTGTLAASSSLDSQILLWDLETGKLTKTYDGDPADTWTIVFSP 131

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +A  ++       V +++ +  +    I      + +  + S+G +   +   +  
Sbjct: 132 DSRFLATGSHTG----CVNMINVQTAQKESSIQLEGKFVYSLAYISDGSKLA-AGTINGL 186

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKR 340
           + I   DL++   + L        S S+SPD   +   SD    +Q+ V    +G     
Sbjct: 187 VSIC--DLETGNVQFLDGHATPVRSVSFSPDGRLLASASD---DKQIKVFDVRDGRLAIP 241

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWS 398
                +       ++     +          ++ +      +E+      +  +    +S
Sbjct: 242 SLNGHKGWVVSVDFASDNRHLVTASTD---CSVRIWDLASKEEKHCFNTHEDQVWCARYS 298

Query: 399 PSGRSLIFSRKKDGDTGSKLY 419
           P G ++I       D    +Y
Sbjct: 299 PQGNNII---SVGDDRSIMIY 316



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 61/186 (32%), Gaps = 27/186 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYV 330
              S   D  + ++  DL++    +  +    +     +SPDS  +   S       + V
Sbjct: 93  LAASSSLDSQILLW--DLETGKLTKTYDGDPADTWTIVFSPDSRFLATGSHTGCVNMINV 150

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             +      ++  + +  Y     S  G  +A    +G    + +   +    + L   +
Sbjct: 151 QTAQKESSIQL--EGKFVYSLAYIS-DGSKLAAGTING---LVSICDLETGNVQFLDGHA 204

Query: 391 N-LQAPTWSPSGRSLIFSRK---------KDGDTG--------SKLYSIDLNGRNETLIN 432
             +++ ++SP GR L  +           +DG             + S+D    N  L+ 
Sbjct: 205 TPVRSVSFSPDGRLLASASDDKQIKVFDVRDGRLAIPSLNGHKGWVVSVDFASDNRHLVT 264

Query: 433 TPAYAS 438
                S
Sbjct: 265 ASTDCS 270


>gi|302532907|ref|ZP_07285249.1| predicted protein [Streptomyces sp. C]
 gi|302441802|gb|EFL13618.1| predicted protein [Streptomyces sp. C]
          Length = 778

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 43/135 (31%), Gaps = 2/135 (1%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D   V    T        +    + + A  FS +G R   +   D  + ++ V       
Sbjct: 634 DERVVVWDPTAHAPPGPELEGHLNSVGALAFSPDGHRLA-TGDADGEVLLWDVTAPGTPG 692

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            RL+         ++SP   ++   S+ +G  Q++   +              +     +
Sbjct: 693 RRLSGHTGAVHDLAFSPQGHRLASASE-DGTVQVWDTATGEPATDLPLTGHTGAVRGVAF 751

Query: 355 SPQGDLIAFTKFSGE 369
           SP   L+A     G 
Sbjct: 752 SPDSSLLASAGSDGT 766



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 44/120 (36%), Gaps = 10/120 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  ++A     D D   +    T      +R+      +    FS  G R   S  
Sbjct: 663 AFSPDGHRLA---TGDADGEVLLWDVTAPGTPGRRLSGHTGAVHDLAFSPQGHRLA-SAS 718

Query: 278 KDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +D  + ++  D  +        LT         ++SPDSS +   +  +G  + ++  + 
Sbjct: 719 EDGTVQVW--DTATGEPATDLPLTGHTGAVRGVAFSPDSSLLA-SAGSDGTLRCWLTPTA 775



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 73/201 (36%), Gaps = 16/201 (7%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             D  +    F+P+ Q +   T DD +++  + + TR    P  IG    +      S +
Sbjct: 263 GHDGSVDAVAFTPDGQIL--VTADDVNVIIRWDVATRKPVGPPLIGPNGEVKALVCLS-D 319

Query: 269 GK-RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           G+ RA    Q+  ++ ++     S+   RL   L     A++S D + +       G+E 
Sbjct: 320 GRVRAAFGHQQ--SLFLWDFGTDSSVGTRLAENLRPGFGATFSADGALLAAT----GRET 373

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---R 384
             +  ++     R   +         +S  G  +A    S     + +      +     
Sbjct: 374 TSLWDTSTHALVRSLPESADHGGRLTFSADGRRLASVDNSDT---VRLWDPATGEPLGRP 430

Query: 385 LLVEDSNLQAPTWSPSGRSLI 405
           L V      +P  SP GR L+
Sbjct: 431 LTVHKGPFSSPALSPDGRVLV 451



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 51/180 (28%), Gaps = 31/180 (17%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           F   FS +   +A    +        L DT      + +           FS++G+R   
Sbjct: 355 FGATFSADGALLAATGRETTS-----LWDTSTHALVRSLPESADHGGRLTFSADGRRLA- 408

Query: 275 SVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           SV   + + ++  D  +       LT       S + SPD   +V   + +     +   
Sbjct: 409 SVDNSDTVRLW--DPATGEPLGRPLTVHKGPFSSPALSPDGRVLVVCGESDSLIVYHETP 466

Query: 333 SNGSDQKR---------------------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              +   R                     ++     +     +SP G  +      G+  
Sbjct: 467 QAEATPPRPLAVRALDAALEQRQAVSLPPLAGAGGTAMHRLAFSPDGARLLVRAQDGQVH 526



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 40/109 (36%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L   +  N  A++SPD   +     RE  + +  +       +      E +     +SP
Sbjct: 173 LVTWMDNNYCAAFSPDGRILAVSGVRENHDGVVHLWDPVRGVRLGDLKGETAALSLSFSP 232

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              ++A     G          + +   +L  D ++ A  ++P G+ L+
Sbjct: 233 SSGVLAVGDMHGTVRLWDTATLEPAGPPMLGHDGSVDAVAFTPDGQILV 281



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 54/173 (31%), Gaps = 16/173 (9%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR--APKRIGN 255
            D        P  +    EP +    +++A              + TR         +  
Sbjct: 117 YDAFGAERPVPPHNSPELEP-WRRRWRELAALEPVRRPPPAELRVPTRGTGFDMAHVLVT 175

Query: 256 FRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQSNATERLTNTLFINI--SASYS 310
           +        FS +G+   +S  +   D  + ++   ++     RL +        S S+S
Sbjct: 176 WMDNNYCAAFSPDGRILAVSGVRENHDGVVHLWD-PVRG---VRLGDLKGETAALSLSFS 231

Query: 311 PDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           P S  +    D  G  +L+       +    +    + S     ++P G ++ 
Sbjct: 232 PSSGVLA-VGDMHGTVRLWDTATLEPAGPPML--GHDGSVDAVAFTPDGQILV 281



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 56/366 (15%), Positives = 95/366 (25%), Gaps = 103/366 (28%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSP 221
               E  D   R+ F ++      + NS  V   D   G  +             P  SP
Sbjct: 386 RSLPESADHGGRLTFSADGRRLASVDNSDTVRLWDPATGEPLGRPLTVHKGPFSSPALSP 445

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---------P--------- 263
           + + +      + D L VY    + +  P R    R++  A         P         
Sbjct: 446 DGRVLVVC--GESDSLIVYHETPQAEATPPRPLAVRALDAALEQRQAVSLPPLAGAGGTA 503

Query: 264 ----RFSSNGKRALISVQKDE----------------------AMDIYSVDLQSNATERL 297
                FS +G R L+  Q  +                      A        +    E  
Sbjct: 504 MHRLAFSPDGARLLVRAQDGQVHTWDPAARLRLPETLTAPTGTAPWGVDFPHEGGPAELW 563

Query: 298 TNTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQSNGS---------------- 336
           T    +    S     S++ F  DR       + ++ V+ +                   
Sbjct: 564 TRGRPLGRGVSLV---SRVAFCGDRRVAFISAEWRVSVLDATDGRNAGHVPAGVADVFAL 620

Query: 337 -------------DQKRISQDKEA-------------SYFDPVWSPQGDLIAFTKFSGEK 370
                        D++ +  D  A             S     +SP G  +A     GE 
Sbjct: 621 AAAADGSLLAAAMDERVVVWDPTAHAPPGPELEGHLNSVGALAFSPDGHRLATGDADGEV 680

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
               V        RL      +    +SP G  L  + +   D   +++     G   T 
Sbjct: 681 LLWDVTAPGTPGRRLSGHTGAVHDLAFSPQGHRLASASE---DGTVQVWDT-ATGEPATD 736

Query: 431 INTPAY 436
           +    +
Sbjct: 737 LPLTGH 742



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 32/98 (32%), Gaps = 4/98 (4%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L  +   G   R L+      + +  FSP   ++A A+ D    ++V+   T        
Sbjct: 682 LWDVTAPGTPGRRLS-GHTGAVHDLAFSPQGHRLASASED--GTVQVWDTATGEPATDLP 738

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +      +    FS +    L S   D  +  +     
Sbjct: 739 LTGHTGAVRGVAFSPD-SSLLASAGSDGTLRCWLTPTA 775


>gi|288922564|ref|ZP_06416744.1| WD-40 repeat protein [Frankia sp. EUN1f]
 gi|288346082|gb|EFC80431.1| WD-40 repeat protein [Frankia sp. EUN1f]
          Length = 652

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/225 (17%), Positives = 71/225 (31%), Gaps = 21/225 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G + R +       +     S + + V     D      +   D         +      
Sbjct: 256 GCSARLVLRGHRGPVNGVAVSLDGRSVVAVGSDG----TLRTWDVATGSPTLTVPVAVGP 311

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVF 318
           +       +    +++    +   I+ VDL++ A   RL   L   ++ +Y PD S +V 
Sbjct: 312 LRCCAVGPDPTTVVVA---GDDGAIWPVDLRTGAAGSRLPGHLGPVLALAYGPDGSWLV- 367

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +  +G   L    +    Q     D          SP G        + E   I V   
Sbjct: 368 SAGEDGT--LRRWDTVTGRQVATIGDGGRPVHACALSPDGSFAV----APEGDVIAVRDP 421

Query: 379 -DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-KLYSI 421
            DG+Q   L      +A   +P G  +       G  G+ +L+S 
Sbjct: 422 GDGTQWAELTGAVGTRACVVAPDGSWIA----SGGRYGTIRLWST 462


>gi|224079664|ref|XP_002196574.1| PREDICTED: WD repeat domain 8 [Taeniopygia guttata]
          Length = 449

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 72/196 (36%), Gaps = 15/196 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +   +         I++V+ ++        +I    + ++A  +S +G+  L + + 
Sbjct: 56  WSSDSLFIL-CAMYKRGIVQVWSLEQPDWHC--KIDEGSAGLVASCWSPDGRHILNTTEF 112

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++S  L + +   +          +++ D   +     R+ K+ + +        
Sbjct: 113 HLRITVWS--LCTKSVSYIKYPKACQQGVAFTKDGRYMAVAERRDCKDFISIFVCRSWQL 170

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--- 395
            R    +    F   W+P G ++A    +  ++ + +   DG   RLL      + P   
Sbjct: 171 LRHFDTETQDLFGIEWAPNGCVLA-VWDTCLEYKVLLYSLDG---RLLSSYRAYEWPLGI 226

Query: 396 ---TWSPSGRSLIFSR 408
               WSPS + L    
Sbjct: 227 KSIAWSPSSQFLAIGS 242


>gi|256072958|ref|XP_002572800.1| hypothetical protein [Schistosoma mansoni]
 gi|322518365|sp|C4Q0P6|LIS1_SCHMA RecName: Full=Lissencephaly-1 homolog
 gi|238657965|emb|CAZ29032.1| expressed protein [Schistosoma mansoni]
          Length = 417

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 84/249 (33%), Gaps = 23/249 (9%)

Query: 175 SRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +R+LF     V  S     S+ V D +     +        + +  F P+ + +A  + D
Sbjct: 126 TRVLFHPHYNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSGKFLASCSAD 185

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                +V L D  I +  K +      + +  F  +G   + S  +D+ + ++ V     
Sbjct: 186 M----QVKLWDFTIYQCIKTLTGHDHNVSSVAFLPSGDFLV-SASRDKTIKMWEVSTGYC 240

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               + +T +I  S   SP+ + +   S+      + +      + + + +  E      
Sbjct: 241 TKTFIGHTEWI-RSVRPSPEGNLLASCSN---DHTIRIWSVESRECQVVLRGHEHVVECI 296

Query: 353 VW------------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            W            S    L+  +           +        L+  D+ ++   + P 
Sbjct: 297 AWASHPQNLNSLPSSMNSSLLLVSGSRDRTIRFWDVNIGICLFVLIGHDNWVRQLVFHPH 356

Query: 401 GRSLIFSRK 409
           GR L+ +  
Sbjct: 357 GRLLLSASD 365


>gi|224537082|ref|ZP_03677621.1| hypothetical protein BACCELL_01959 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521309|gb|EEF90414.1| hypothetical protein BACCELL_01959 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 750

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 48/371 (12%), Positives = 113/371 (30%), Gaps = 79/371 (21%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
               G V     D     + L +     ++    + +    W +  H      +      
Sbjct: 19  AFAQGTV-----DDYNRAYALREKFSANKVF---YSNVTPQWIEGTHQF----WYVRNTP 66

Query: 170 KGDFNSRILFVSESVVSGIIKNSLC--VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           +G     +    ++         L   + +  G  ++      +++   P  S +  +  
Sbjct: 67  EGRIYVSVNADKKNRKELFDHKRLASALSNASGKEVKPEAIQLERLRVNP--SLDTLRFV 124

Query: 228 Y----ATYDDEDILRVYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +      Y       V         AP++  +        AP  S +GK         + 
Sbjct: 125 FGNQRWMYATRKNQLVNEGALPDRNAPQKHWMERDDEKEAAPVTSPDGKYTAYI----KN 180

Query: 282 MDIYSVDLQSNATERL----TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            ++Y  +L +   ++L    T + + ++   +SPDS ++V    R  +++ YV     S 
Sbjct: 181 QNVYVKELATGKEKQLSLDGTLSNYYSVYIRWSPDSKKVVSCKIRPVEKR-YVYYVESSP 239

Query: 338 QKRI-------------------------------------SQDKEASYFDPVWSPQGDL 360
             ++                                       D++   + P W+P    
Sbjct: 240 ADQLQPKLHKQEYAKPGDELPFKIPCIYEVETGRGIIPSTDLFDRQYEIYGPEWNPDSRS 299

Query: 361 IAFTKFSGEKFAIGV--MKKDGSQERLLVEDSNLQAPTWS-------PSGRSLIFSRKKD 411
           + F        A  V  +  +    R L+E+++ +   ++          + +I+  ++D
Sbjct: 300 VTFEYNQRGHQAYRVLELSAETGTVRPLIEETSDKYVNYTRRFRHDLRDNKHIIWMSERD 359

Query: 412 GDTGSKLYSID 422
               + LY  D
Sbjct: 360 N--WNHLYMYD 368



 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/299 (13%), Positives = 93/299 (31%), Gaps = 66/299 (22%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-----IGN 255
           A  ++     D+    P  SP+ +  AY          VY+ +    +  +      + N
Sbjct: 150 APQKHWMERDDEKEAAPVTSPDGKYTAYI-----KNQNVYVKELATGKEKQLSLDGTLSN 204

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL------------------ 297
           + S+ +  R+S + K+ ++S +       Y   ++S+  ++L                  
Sbjct: 205 YYSVYI--RWSPDSKK-VVSCKIRPVEKRYVYYVESSPADQLQPKLHKQEYAKPGDELPF 261

Query: 298 -----------------TNTLFINIS---ASYSPDSSQIVFESDREGKEQLYV--MQSNG 335
                            T+            ++PDS  + FE ++ G +   V  + +  
Sbjct: 262 KIPCIYEVETGRGIIPSTDLFDRQYEIYGPEWNPDSRSVTFEYNQRGHQAYRVLELSAET 321

Query: 336 SDQKRI---SQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVED 389
              + +   + DK  +Y             I +         + +  +  +Q    +   
Sbjct: 322 GTVRPLIEETSDKYVNYTRRFRHDLRDNKHIIWMSERDNWNHLYMYDRSTAQPVHQITRG 381

Query: 390 SNL--QAPTWSPSGRSLIFSRK--KDGDTGSKL--YSIDLNGRNETLINTPAYASDPQW 442
                +        R + FS    + G+    +  Y I  +G++   + TP       W
Sbjct: 382 KWYVREVLRVDEDNRQIYFSANGVQPGEDPYLIRYYRIGFDGKDLVCL-TPEEGMHRAW 439



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/171 (12%), Positives = 59/171 (34%), Gaps = 16/171 (9%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRF 265
            R   ++ P ++P+ + V +            L  +      + +    + + +    RF
Sbjct: 283 DRQYEIYGPEWNPDSRSVTFEYNQRGHQAYRVLELSAETGTVRPLIEETSDKYVNYTRRF 342

Query: 266 S---SNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINIS-ASYSPDSSQIVFES 320
                + K  +   ++D    +Y  D  +     ++T   +          D+ QI F +
Sbjct: 343 RHDLRDNKHIIWMSERDNWNHLYMYDRSTAQPVHQITRGKWYVREVLRVDEDNRQIYFSA 402

Query: 321 D--REGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +  + G++    + Y +  +G D   ++ ++        +S   + +    
Sbjct: 403 NGVQPGEDPYLIRYYRIGFDGKDLVCLTPEEGMHRAW--FSGDMNYLVDVH 451


>gi|229198482|ref|ZP_04325186.1| TolB domain protein [Bacillus cereus m1293]
 gi|228584985|gb|EEK43099.1| TolB domain protein [Bacillus cereus m1293]
          Length = 400

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 86/248 (34%), Gaps = 51/248 (20%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY     +  L +Y +     +
Sbjct: 25  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSHDGEWLAYVKGKKQSNLELYRL-----K 75

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K++  F S +   ++S               +  + V+ ++   E ++  +      +
Sbjct: 76  DGKKVTPFHSEVSNYQWSPTENIIAFIFT--GTLHTFEVEKKNADFENVSAGVGDY---A 130

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-------------------- 348
           + P+  + +  S+       +     G+    + +D   +                    
Sbjct: 131 WYPNGKKFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHDDFLAL 186

Query: 349 -YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWS 398
                 WSP    I+F       +S +   + +++ DGS+     ++L+     +   W+
Sbjct: 187 VASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK---WA 243

Query: 399 PSGRSLIF 406
           P+   L +
Sbjct: 244 PANNILAY 251



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAF +       + + K DG +E+ L +   +  P WS  G  L + + K   +  +LY
Sbjct: 20  KIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSHDGEWLAYVKGKK-QSNLELY 72

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++    S+ QW  
Sbjct: 73  RLK-DGKKVTPFHS--EVSNYQWSP 94


>gi|332663330|ref|YP_004446118.1| WD40-like beta Propeller containing protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332332144|gb|AEE49245.1| WD40-like beta Propeller containing protein [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 762

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 57/354 (16%), Positives = 115/354 (32%), Gaps = 56/354 (15%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTI--SDDIYQSITGEKGDFNSRILFVSESVVS 186
           R +D+      +    +   A+W K    +  +  +Y  +     D + R LF +     
Sbjct: 329 RGYDLFR----LALSAYQRRAAWDKALQLLKTAQQLYPDVMPP--DCDKRYLFYTSKNEW 382

Query: 187 GIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL--- 241
                 +     DG +I  +      D+    P FSP+ + +  A  +  + L +Y+   
Sbjct: 383 FKTAIDIMQRPADGFSIEPVPGLSQADREELAPVFSPDGRSLYLALENGRNGLDIYISHF 442

Query: 242 -MDTRIDRAPKRIGNFRSMILAPRFS--SNGKRALISVQKDEAMDIYSVDLQSNATE--- 295
            +     + P+R+ +  S      +S   +G+     + +   + + +            
Sbjct: 443 DVQQNFWQTPQRVASLSSAADDIPYSVTRDGRE--FLLAQGGKLMMSTYGASDWQKPFGL 500

Query: 296 RLT-NTLFINISASYSPDSSQIVFES------------------------DREGKEQLYV 330
            LT N       A+ SPD   ++FE                          R G     +
Sbjct: 501 PLTVNEFPWVGRATLSPDGRCLIFEGSGNKKEAHEVEPPFIHLYRMVKGESRFGWGNPQI 560

Query: 331 MQS---NGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           M S    G +++  +   + + +     W   G    F   S +       K +   + +
Sbjct: 561 MASLIIEGGEERTPAFGPDGNLYFIADRWPSLGQGDVFVTRSTKDDWSEWTKPENLGKEV 620

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKK-DGDTGSKLYSIDLNG----RNETLINTP 434
                     + +P   S IF+  +      S+LYS+ L G        ++N P
Sbjct: 621 NTLGEEKHWLSIAPDNTSAIFATDELSKKHESELYSMALPGIAKAEKHQILNLP 674


>gi|325188617|emb|CCA23149.1| notchless family protein putative [Albugo laibachii Nc14]
          Length = 508

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 66/176 (37%), Gaps = 21/176 (11%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPS 209
           R+  H  +   YQ++               E +VSG    +L   +    N + +     
Sbjct: 344 REQMHKAALTRYQNVRKNHP----------ERLVSGSDDYTLFFWEP-AENKKSVERLTG 392

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             Q +    FSP+ +  A A++D +    V + +    +    +      +    +SS+ 
Sbjct: 393 HVQPVNHICFSPDGRYFASASFDKK----VKIWNGHTGKFIATLTGHVGAVYQVCWSSD- 447

Query: 270 KRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFES-DRE 323
            R ++S  KD  + ++ + DL+      L        +  +SP+  ++   S DR 
Sbjct: 448 SRLIVSASKDSTVKVWELADLKKAKIT-LPGHADEVYALDWSPNGDKVASGSKDRT 502



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 40/133 (30%), Gaps = 3/133 (2%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  +  +       + ERLT  +       +SPD       S     +++ +  
Sbjct: 366 LVSGSDDYTLFFWEPAENKKSVERLTGHVQPVNHICFSPDGRYFASASF---DKKVKIWN 422

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            +             + +   WS    LI             +     ++  L      +
Sbjct: 423 GHTGKFIATLTGHVGAVYQVCWSSDSRLIVSASKDSTVKVWELADLKKAKITLPGHADEV 482

Query: 393 QAPTWSPSGRSLI 405
            A  WSP+G  + 
Sbjct: 483 YALDWSPNGDKVA 495



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/193 (13%), Positives = 57/193 (29%), Gaps = 16/193 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    FSP+ +K+A           V   DT            +  +L   +
Sbjct: 133 TLEGHSGAILHVSFSPDGKKLA----SGGGDATVRFWDTSTCLPKFTGRGHKHHVLCTAW 188

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSP---DSSQIVFESD 321
           S +G+R  +S  K   + ++   L      + +        S  + P   ++S   F S 
Sbjct: 189 SPDGER-FLSGDKAGEIRVWD-PLVGKQVGQAIKGHKQWITSLCWEPMHSNASCERFAS- 245

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK---K 378
                 + V  +     ++I+               G+ + ++        +  +    +
Sbjct: 246 ASKDSMIKVWNARTG--RQIASLSGHVDSVECVKWGGEGLLYSASRDRTIKVWAVNSEEQ 303

Query: 379 DGSQERLLVEDSN 391
            G   R L    +
Sbjct: 304 TGKLIRTLTGHGH 316


>gi|254282427|ref|ZP_04957395.1| dipeptidyl peptidase IV [gamma proteobacterium NOR51-B]
 gi|219678630|gb|EED34979.1| dipeptidyl peptidase IV [gamma proteobacterium NOR51-B]
          Length = 462

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 53/371 (14%), Positives = 117/371 (31%), Gaps = 48/371 (12%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
           L++        T   +      W+      L+ G      +      + +WD +      
Sbjct: 75  LLALADLPGLPTGFQATDV--TWSEESGFALIKGVPGTTWEGYEEAAYYVWDPERE---A 129

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
                S+    R +   ++ D         G  +   L+V E+    +      +    G
Sbjct: 130 AWPLVSARKKLRLV--KMAPD-----GRSIGFVDGNNLYVVETASGDMR----AITTDGG 178

Query: 201 ANIRYLTPSRDQILFEPR----FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
            +I           F PR    +SP+ + +A+   D   +    ++D        R  ++
Sbjct: 179 EDIFNGIFDYGSTEFGPRGAWFWSPDGRNIAFWRLDATSVPFYSMIDRLPGYPEVRRFHY 238

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISA--SYSPDS 313
            +                + Q   +  +    L +  T  L T     +     S+ P S
Sbjct: 239 PN----------------TEQAHASYQVGVYALDTGKTRWLETGHDVDDYLPHLSWFP-S 281

Query: 314 SQIVFESDREGKEQL---YVMQSNGSDQKRISQDKEASYFD---PVWSPQGDLIAFTKFS 367
           S+ +F        Q+        + +  +R+ +D + ++ D    +     +   ++   
Sbjct: 282 SEGLFVQRLTRDHQILDVLRFDLSTTGAQRMVRDTQPTWLDVTLDMIPLSNEAFLWSSEK 341

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NG 425
                I + + D   ++L   D ++       P G  + F  K+D      +Y + L  G
Sbjct: 342 TGWRHIYLCRVDAGCDQLTDGDWSMDELLAVDPDGDWVYFYAKRDSLIDQHVYRVPLAGG 401

Query: 426 RNETLINTPAY 436
             E + + P +
Sbjct: 402 AVEHVTDQPGW 412


>gi|67594391|ref|XP_665796.1| notchless [Cryptosporidium hominis TU502]
 gi|54656631|gb|EAL35565.1| notchless [Cryptosporidium hominis]
          Length = 535

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 47/256 (18%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
           I+  +    +++   +     W  +  + +V        +D L    ++W+ +  + +  
Sbjct: 280 ITTGTIINTLSSHTEMITHVKWTGINQEYVV-----SSSRDTL---IKVWNPETGQLLRD 331

Query: 142 KK---------------------FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
            K                     ++ +  + +    ++ D I  +      +F  R  F 
Sbjct: 332 LKGHAHWVNTLALNTDYITRSACYYPTGKNLKLNFKSLQDKI-AAAKQSVDNFKKRCKF- 389

Query: 181 SESVVSGIIKNSLCVMDRDGANIR---YLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            E ++SG   N++ + D  G N R   +      +++    FSP+ + +A A++D     
Sbjct: 390 -ERLLSGSDDNTMFLWDPLGENGRKPIHRLTGHLKVVNHVAFSPDGRYIASASFDK---- 444

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-------DLQ 290
            + L D    +    +      +    +S + +    S   D  + ++ V       DL 
Sbjct: 445 TIRLWDGHSGKFIAVLRGHVGPVYMVSWSVDSRLIA-SASSDSTVKVWHVSSKKLKEDLP 503

Query: 291 SNATERLTNTLFINIS 306
            +A E  T    I+ S
Sbjct: 504 GHADEVYTIDWSIDGS 519



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 35/115 (30%), Gaps = 8/115 (6%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               RLT  L +    ++SPD   I   S     + + +   +      + +      + 
Sbjct: 413 KPIHRLTGHLKVVNHVAFSPDGRYIASASF---DKTIRLWDGHSGKFIAVLRGHVGPVYM 469

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSL 404
             WS    LIA          + V      + +  +     +  T  WS  G  L
Sbjct: 470 VSWSVDSRLIASASSDST---VKVWHVSSKKLKEDLPGHADEVYTIDWSIDGSRL 521


>gi|110636904|ref|YP_677111.1| OmpA family outer membrane protein [Cytophaga hutchinsonii ATCC
           33406]
 gi|110279585|gb|ABG57771.1| outer membrane protein, OmpA family [Cytophaga hutchinsonii ATCC
           33406]
          Length = 620

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 94/326 (28%), Gaps = 39/326 (11%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V+       + +F    +  +  H     IY     + G  NS+ +   E       + +
Sbjct: 83  VRKSPNPTNEMYFVYAQALHQ-NHRWDSAIYYYKKSDPGKLNSKNISRLEGECMNGKRYT 141

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
               +    N   L  S+  + + P  + +  K+ + +            D         
Sbjct: 142 SNPKNIKITNAGALVNSQ-GMDYLPNITADLSKLYFTSRRGGSTGGKLEADGLPYEDIYM 200

Query: 253 IGNFRS-----MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER----------- 296
             N        + +    +++   A + + +          +      +           
Sbjct: 201 CSNVGGAWNQAINIGAPLNTDVHDACVGISEGGQTMFIYRGVNGGDIFQSELKGKKWSAA 260

Query: 297 ---LTNTLFINISASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEA 347
                NT F   SA  SPD   + F       S+R+       +  N S   +++ +   
Sbjct: 261 SPLPMNTEFFETSACLSPDERTLFFVRATNAYSNRDIYMCSRTVGGNWSKPVKLTINTPF 320

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPT---------- 396
               P   P G  + F+           + K       +     N+ +P           
Sbjct: 321 DEDAPYMHPDGKTLYFSSKGHSTMGGYDVFKTTKLANGVWSTPENMGSPVNTAGDDVYFV 380

Query: 397 WSPSGRSLIFSRKKDGDTGSK-LYSI 421
            S  G+   +S  K+G  G + +YSI
Sbjct: 381 LSADGKIGYYSSNKEGGFGKQDIYSI 406


>gi|297466134|ref|XP_001251626.3| PREDICTED: WD repeat domain 51B-like, partial [Bos taurus]
          Length = 371

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/254 (15%), Positives = 89/254 (35%), Gaps = 12/254 (4%)

Query: 160 DDIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           D + +          + + F      + +G     L +         +       ++   
Sbjct: 7   DPVLERYFKGHKAAITSVDFSPNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSV 66

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FSP    +A A+ D    +R+++ D R   +  +       + +  FS++G+    S  
Sbjct: 67  QFSPLGNLLASASRD--RTIRLWIPDKRGKSSEFKAHTAP--VRSVDFSADGQFLA-SAS 121

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D+++ ++++  Q      L         A +SPD   IV  S+    + + +  +    
Sbjct: 122 EDKSIKVWNMYRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSE---DKTIKIWDTTNKQ 177

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 D         ++P G  IA +  S     I  ++ +   +   V    +   ++
Sbjct: 178 CVNNFSDFVGFANFVAFNPNGTCIA-SAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSF 236

Query: 398 SPSGRSLIFSRKKD 411
            PSG  LI +    
Sbjct: 237 HPSGNYLITASSDG 250


>gi|271967643|ref|YP_003341839.1| hypothetical protein Sros_6378 [Streptosporangium roseum DSM 43021]
 gi|270510818|gb|ACZ89096.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 556

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 60/194 (30%), Gaps = 11/194 (5%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y T    + + V    T    A   +G F S +     S +G    ++ Q   + +I  +
Sbjct: 46  YVTNLRGNSVSVIDATTGTVSATVPVGTFPSGV---AVSPDGAEVYVTNQ--GSNNISVI 100

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D  +N               +++PD +         G  Q   +    +     +     
Sbjct: 101 DAATNTVSATIPASQFPNPVAFAPDGAHAYVGVSLGGGAQGVRVIDTATHTVTATVTVTG 160

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSL 404
             FD   +P G       F G    + V+    +     +   + Q P     SP G   
Sbjct: 161 QPFDIAVTPDGGKAIVAGFVGST--VSVIDTATNTVTATITSPSAQTPAGVVISPDGTH- 217

Query: 405 IFSRKKDGDTGSKL 418
            ++   + +  S +
Sbjct: 218 AYTANYNSNNVSVI 231


>gi|149201549|ref|ZP_01878523.1| WD domain/cytochrome c family protein [Roseovarius sp. TM1035]
 gi|149144597|gb|EDM32626.1| WD domain/cytochrome c family protein [Roseovarius sp. TM1035]
          Length = 436

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 64/216 (29%), Gaps = 48/216 (22%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              D   + + D       + +G  +  + A   S +G     S   D ++ I+   +  
Sbjct: 86  SGGDDFTLIVWDRETGEGTRHVG-HKGKVAALDVSPDGAWIA-SASWDGSIGIW--PVAG 141

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            A   LT         ++S D + +++ S  +G  Q +  Q   +  + +          
Sbjct: 142 GAARFLTGHDAAVSDVAFSSDGA-VLYSSSADGSLQEWRWQEVDAPPRELLNQGFG-INK 199

Query: 352 PVWSPQGDLIAFTKFSGEKFAI-------------------------------------G 374
            +  PQ   +A+    G    I                                      
Sbjct: 200 ILLGPQDAWLAYGAVDGATRVIDPASGQQIADFTLERRPVLSMAYHAATAQLAAGDGQGY 259

Query: 375 VMKKDGSQERLLVE-DSNLQAPTW----SPSGRSLI 405
           +M  D +  ++  +  +  + P W    SP GR + 
Sbjct: 260 IMVIDTNAWQIARDFQAMARGPVWALDFSPDGRMIY 295



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 61/212 (28%), Gaps = 20/212 (9%)

Query: 187 GIIKNSLCVMDRDGANI-----RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           G     L +    GA+                +      P   +V   ++D+        
Sbjct: 2   GARAFGLWLWALAGASPLAAQEFTTLKGHGGPVMGLSVLPESGEVVSVSFDNS------- 54

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +     R P+      + ++A     +G+         +   +   D ++    R     
Sbjct: 55  VGLWEGRTPRWFEGHAAAVVAVAALEDGRLV----SGGDDFTLIVWDRETGEGTRHVGHK 110

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +   SPD + I   S       + +    G   + ++   +A+  D  +S  G ++
Sbjct: 111 GKVAALDVSPDGAWIASAS---WDGSIGIWPVAGGAARFLT-GHDAAVSDVAFSSDGAVL 166

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             +   G        + D     LL +   + 
Sbjct: 167 YSSSADGSLQEWRWQEVDAPPRELLNQGFGIN 198


>gi|116620932|ref|YP_823088.1| hypothetical protein Acid_1813 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116224094|gb|ABJ82803.1| hypothetical protein Acid_1813 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 558

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 8/115 (6%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + V Y       I R+      +           S   AP  +++G R +       A+ 
Sbjct: 229 RMVVYVNQGSIRIYRIAEQQDAL-----LAAVPDSDSSAPYLAADGSRVMFLSGHPGALQ 283

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +Y+V+   +  +R+T+        + S D     + +   G  +LY M  +  + 
Sbjct: 284 LYTVNTDGSQLQRVTHEPSGVTQGAMSDDGKAAWYFA---GDARLYRMNLDTGEA 335



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 71/227 (31%), Gaps = 21/227 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--RFSSNGKRALIS 275
           R S N + +     ++       ++D +      R  +            + +G  A + 
Sbjct: 139 RLSGNGRYLFTYGANNTPGFYASIIDLQTGDTYDRAPDNPEHAPGAGRVVADDGTVAYMD 198

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                   +        + +R+      +  A     +  +V+ +       + + +   
Sbjct: 199 FDLTLLTPV--------SVQRVPLHFPNSGGAVIDRAARMVVYVNQGS----IRIYRIAE 246

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQA 394
                ++   ++    P  +  G  + F         +  +  DGSQ + +  E S +  
Sbjct: 247 QQDALLAAVPDSDSSAPYLAADGSRVMFLSGHPGALQLYTVNTDGSQLQRVTHEPSGVTQ 306

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDP 440
              S  G++  +         ++LY ++L+ G     +  P    DP
Sbjct: 307 GAMSDDGKAAWYFA-----GDARLYRMNLDTGEAHLRMAAPPQIGDP 348


>gi|116623491|ref|YP_825647.1| hypothetical protein Acid_4401 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226653|gb|ABJ85362.1| hypothetical protein Acid_4401 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 692

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 74/212 (34%), Gaps = 25/212 (11%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRALISVQKDEAMDIYSVDL 289
           +      Y ++TR+  +   + N          P  +  G    +   +     ++ V+ 
Sbjct: 5   EPPCFSAYSLETRVKGSYSMVQNQIGNNTTSSHPFVTPAG----VVYFRGTDNKLWRVNS 60

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                 ++ N    +     + D     +   +    +L+ + +NG+ Q +       + 
Sbjct: 61  DGTGQIQVGNNTTKST-PFVTVDG----WVWFQGTDNKLWKVFNNGAQQSQ--PRGNTTN 113

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             PV         +  F G    +  MK DGS + ++  +S    P  +P G  + F   
Sbjct: 114 SSPVVVAD-----YVYFQGTDNKLWRMKTDGSAQNVINNNSTKSTPFVTPDG-WVWFQ-- 165

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
               T +KL+ +  +G +++       +S P 
Sbjct: 166 ---GTDNKLWKVFTDGSHQSQPGNNTTSSSPT 194



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 86/275 (31%), Gaps = 36/275 (13%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T     F +    V            L  ++ DG     +    +     P  + +   V
Sbjct: 33  TTSSHPFVTPAGVVYFRGTDNK----LWRVNSDGTGQIQV--GNNTTKSTPFVTVDG-WV 85

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +   D++      L     + A +      +   +P   ++         +     ++ 
Sbjct: 86  WFQGTDNK------LWKVFNNGAQQSQPRGNTTNSSPVVVAD-----YVYFQGTDNKLWR 134

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +     + + + N      +   +PD     +   +    +L+ + ++GS Q +      
Sbjct: 135 MKTD-GSAQNVINNNSTKSTPFVTPDG----WVWFQGTDNKLWKVFTDGSHQSQ--PGNN 187

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +   P          +  F G    +  M  DG+ + ++  ++    P  +P G  + F
Sbjct: 188 TTSSSPTVMGD-----YVYFRGTDNKLWRMTTDGAHQNVINNNTTNNTPLVTPEG-WVWF 241

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                  T +KL+ +  +G  ++  N     S P 
Sbjct: 242 Q-----GTDNKLWRVFTDGSQQSQPNNNTTLSTPA 271


>gi|324328258|gb|ADY23518.1| putative tolB domain protein [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 412

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 86/248 (34%), Gaps = 51/248 (20%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY     +  L +Y +     +
Sbjct: 35  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSHDGEWLAYVKGKKQSNLELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K++  F S +   ++S               +  + V+ ++   E ++  +      +
Sbjct: 86  DGKKVTPFHSEVSNYQWSPTENIIAFIFT--GTLHTFEVEKKNADFENVSAGVGDY---A 140

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-------------------- 348
           + P+  + +  S+       +     G+    + +D   +                    
Sbjct: 141 WYPNGKKFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHDDFLAL 196

Query: 349 -YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWS 398
                 WSP    I+F       +S +   + +++ DGS+     ++L+     +   W+
Sbjct: 197 VASGFKWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK---WA 253

Query: 399 PSGRSLIF 406
           P+   L +
Sbjct: 254 PANNILAY 261



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            IAF +       + + K DG +E+ L +   +  P WS  G  L + + K   +  +LY
Sbjct: 30  KIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSHDGEWLAYVKGKK-QSNLELY 82

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++    S+ QW  
Sbjct: 83  RLK-DGKKVTPFHS--EVSNYQWSP 104


>gi|271964131|ref|YP_003338327.1| serine/threonine protein kinase-like protein [Streptosporangium
            roseum DSM 43021]
 gi|270507306|gb|ACZ85584.1| Serine/threonine protein kinase-like protein [Streptosporangium
            roseum DSM 43021]
          Length = 1148

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 84/273 (30%), Gaps = 25/273 (9%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYL--TPSRDQILFEPRFSPNQQ 224
             E G  +  ++F  +     +  +S  V    D A+ R L     + +      F  + +
Sbjct: 867  PEAGAGSLGLVFSPDGGTLAVTPDSEPVAHLFDTASGRRLGELRWKGKYASRIAFGADGR 926

Query: 225  KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
             +A A     D   V L D    +   R+    +  LA     +G R      +     +
Sbjct: 927  SLAVAASTMSDQPFVELWDVASRKPGTRLPGAGTTALALAPHPDGTRLA----QGGLAGV 982

Query: 285  YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
                L+  A   L +      + S++P    +    D  G+ QL+ + +       I+  
Sbjct: 983  ALTPLRGGAAATL-DGAGDVRAVSFAPAGDLLA-VGDAAGRVQLWEVATRRPRGPAIAAH 1040

Query: 345  KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                     +SP G L+  +   G + A+  +   G   R              P G   
Sbjct: 1041 PGGVDLA-AFSPDGALLVTS--GGGRVALWDVATGGQLGRPAAGVERAVTGVAFPDG--- 1094

Query: 405  IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                      G  L ++  +G        P  A
Sbjct: 1095 ----------GRTLRTVTADGTVADRPLDPGRA 1117



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 49/309 (15%), Positives = 87/309 (28%), Gaps = 54/309 (17%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI---------------YQSITGEKGD 172
            RLWD+K  +++ G   +    SW  I+   +D +                + +    G 
Sbjct: 605 LRLWDLKTGRRLPG--VYGDAGSWAAISPDGADLLSFDGSALVVRDIERGEELMRLPGGQ 662

Query: 173 FNSRIL----FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              R      +V+ S    +    L      G ++R   P           S + + +  
Sbjct: 663 AWGRSAGGGRYVTTSGEGAVRLWDLRT----GRSLRAPAPPEGTGSVGAALSADGRTLV- 717

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                E    +   D    R        R   L   F+ +G+     V     + +  V 
Sbjct: 718 ----LERADTLVFWDVGSGRRLGETSVPRGGHLL--FAPDGRTLA--VLHLGGVVLVGVP 769

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                 +  T+      S  +SPD   + F    +G + +  +                +
Sbjct: 770 GVVTLLDYPTDEQPRAESVRFSPDGRAVRFV---DGADSVVTLSVPE-------WSGAGA 819

Query: 349 YFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---------TWS 398
                 SP G   A  T F   +       + G     L       AP          +S
Sbjct: 820 AQGGALSPDGTRTAVQTAFGTRRRVEVRDVRTGRAVATLAVPPTPPAPEAGAGSLGLVFS 879

Query: 399 PSGRSLIFS 407
           P G +L  +
Sbjct: 880 PDGGTLAVT 888


>gi|88603683|ref|YP_503861.1| hypothetical protein Mhun_2441 [Methanospirillum hungatei JF-1]
 gi|88189145|gb|ABD42142.1| PKD [Methanospirillum hungatei JF-1]
          Length = 996

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 80/214 (37%), Gaps = 15/214 (7%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           F P  S +   V +  + ++DI  + ++       P  I         P    +G   + 
Sbjct: 140 FRPAVSQD--MVVFEDFGNDDIRDIGMVKVGTSARPVYINPNDKDKANPDI--DGDWIVY 195

Query: 275 SVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               D     +IY  + +++ T ++T  L I  +   S     +V+E +R GK  +++  
Sbjct: 196 QQLDDNKNDWNIYLYNYKTDKTVQVTRDLRIQQNPRIS--GDYVVWEDNRNGKWDIFMYN 253

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLL-VEDS 390
                   ++ D +    +P  S  G  I +T++       I ++     +   + V   
Sbjct: 254 IKKDMTTAVTFD-DYDDVEPAVS--GSKIVWTRYDQENNSDIYMVNLQIPKTYAVCVGPG 310

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           N   P     G  +++   + G     +Y+++ +
Sbjct: 311 NQIRPDI--YGDKVVWQDDRFGGWDIFIYTLEPD 342


>gi|325268228|ref|ZP_08134861.1| putative 6-phosphogluconolactonase [Prevotella multiformis DSM
           16608]
 gi|324989370|gb|EGC21320.1| putative 6-phosphogluconolactonase [Prevotella multiformis DSM
           16608]
          Length = 365

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 66/190 (34%), Gaps = 15/190 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALI 274
           RF+P+   +A   +  + IL       +   +P  I         PR   FS +G+ A +
Sbjct: 172 RFAPDGFVLA-TDFSADQILTFRYDKAKGTLSPYGIATHVKRGSGPRHLVFSPDGRHAYL 230

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YSPDSSQIVFESDREGKEQL 328
             +    + ++  D      +     L  +  A        SPD  + V+ S R   E +
Sbjct: 231 MSELSGYITVF--DYAKGELKATQTILADDAHARGGADIHVSPDG-RFVYASTRLKAEGI 287

Query: 329 YVMQSN-GSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +   G    RI + +  S+      +P G  +       +K  +    K   Q R  
Sbjct: 288 TLFRVEAGGKLVRIGKCRTGSHPRSFTITPNGKYLLVACRDADKIQVFSRDKSTGQLRDT 347

Query: 387 VEDSNLQAPT 396
            +D  L  P 
Sbjct: 348 RQDIQLPRPV 357



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 70/255 (27%), Gaps = 35/255 (13%)

Query: 217 PRFSPNQQKV-----AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           P FS     +      Y     E +       T    A +     ++      F+ +G+ 
Sbjct: 16  PTFSMAGNDLDMVVGTYTGTGSEGLYSFSFNQTTGVAALRSTLEVKNPSYL-AFARDGRH 74

Query: 272 A-LISVQKDEAMDIYSV--DLQSNATE----RLTNTLFINISASYSPDSSQIVFESDREG 324
              +S   D    + S+  D  +        +LT+         Y     ++   ++  G
Sbjct: 75  LYAVSENNDATATLNSIAFDPVTGNMSFMNSQLTHGK----DPCYVATDGKVALTANYSG 130

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDP-------------VWSPQGDLIA--FTKFSGE 369
                          ++++        P              ++P G ++A  F+     
Sbjct: 131 GSLSVFPVLRNGTLGKMTKQFAGYKGGPDRTRQNVPHIHCVRFAPDGFVLATDFSADQIL 190

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            F     K   S   +         P    +SP GR      +  G      Y+      
Sbjct: 191 TFRYDKAKGTLSPYGIATHVKRGSGPRHLVFSPDGRHAYLMSELSGYITVFDYAKGELKA 250

Query: 427 NETLINTPAYASDPQ 441
            +T++   A+A    
Sbjct: 251 TQTILADDAHARGGA 265


>gi|320582343|gb|EFW96560.1| General repressor of transcription [Pichia angusta DL-1]
          Length = 602

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 73/223 (32%), Gaps = 32/223 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---------ILAPRFSSN 268
           RFS + + +A        +  V   D     + +   +             I +  FS +
Sbjct: 287 RFSKDGKFLATGCNKLTQVFSVETGDLVARLSDESSASSNGSYDTDTGDLYIRSVCFSPD 346

Query: 269 GKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           GK    +  +D+ + I+  DL +    + L        S  + PD S++V  S   G   
Sbjct: 347 GKFLA-TGAEDKIIRIW--DLATRTIVKYLKGHEQDIYSLDFFPDGSKLVSGS---GDRT 400

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +          ++   E        SP G LIA          + V   +       +
Sbjct: 401 VRIWDVFTGQCS-LTLSIEDGVTTVAASPDGKLIAAGSLDRT---VRVWDANQGFLVERL 456

Query: 388 EDSN---------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +N         + +  ++  G+ +        D   KL+S+
Sbjct: 457 DSANESGNGHMDSVYSVAFTHDGKDIA---SGSLDRTVKLWSL 496



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 17/169 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +N  Y T + D  +    FSP+ + +A    D      + + D       K +      I
Sbjct: 325 SNGSYDTDTGDLYIRSVCFSPDGKFLATGAEDK----IIRIWDLATRTIVKYLKGHEQDI 380

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFE 319
            +  F  +G + + S   D  + I+  D+ +      L+    +   A+ SPD   I   
Sbjct: 381 YSLDFFPDGSKLV-SGSGDRTVRIW--DVFTGQCSLTLSIEDGVTTVAA-SPDGKLIAAG 436

Query: 320 S-DR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           S DR     +  +   V + + +++         S +   ++  G  IA
Sbjct: 437 SLDRTVRVWDANQGFLVERLDSANESG--NGHMDSVYSVAFTHDGKDIA 483


>gi|195179508|ref|XP_002029112.1| GL26972 [Drosophila persimilis]
 gi|194108653|gb|EDW30696.1| GL26972 [Drosophila persimilis]
          Length = 232

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 67/202 (33%), Gaps = 18/202 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  + + RFSP   ++A ++ D      V L + +      R G+  S +    +S
Sbjct: 14  FTGHSGSITQLRFSPEGSQIATSSLDG----SVILWNLKQASRCIRFGSHSSAVYGVAWS 69

Query: 267 SNGKRALISVQKDEAMDIY---SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             G     S   D ++ I+     D+                S  + P    ++  SD +
Sbjct: 70  PKGNLVA-SAGHDRSVKIWEPKVRDVSG----EFAAHSKPVRSIDFDPTGQMMLTASD-D 123

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              +++ +      Q   S  ++ ++     +SP G +IA      +   I  +      
Sbjct: 124 KSVKIWRVA---KRQFLSSFSQQTNWVRAAKFSPNGKMIATVS-DDKSLRIYDVNTGECT 179

Query: 383 ERLLVEDSNLQAPTWSPSGRSL 404
             +  E    +   W P G  +
Sbjct: 180 RTITEERGAPRQVAWHPWGNMV 201



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 70/202 (34%), Gaps = 25/202 (12%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +        I   RFS  G +   +   D ++ ++++   S    R  +        ++S
Sbjct: 12  RHFTGHSGSITQLRFSPEGSQIA-TSSLDGSVILWNLKQASRCI-RFGSHSSAVYGVAWS 69

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS----PQGDLIAFTKF 366
           P  + +   +  +   +++        + R    + A++  PV S    P G  +  T  
Sbjct: 70  PKGNLVA-SAGHDRSVKIW------EPKVRDVSGEFAAHSKPVRSIDFDPTGQ-MMLTAS 121

Query: 367 SGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +   I  +    ++ + L     + + ++A  +SP+G+ +        D   ++Y ++
Sbjct: 122 DDKSVKIWRV----AKRQFLSSFSQQTNWVRAAKFSPNGKMIATVSD---DKSLRIYDVN 174

Query: 423 LNGRNETLINTPAYASDPQWVG 444
                 T+           W  
Sbjct: 175 TGECTRTITEERGAPRQVAWHP 196


>gi|301761858|ref|XP_002916377.1| PREDICTED: WD repeat-containing protein 38-like [Ailuropoda
           melanoleuca]
          Length = 314

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 57/182 (31%), Gaps = 13/182 (7%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T      K  G     + +  FS +G+R L +  +D  +  +          RL+    
Sbjct: 7   GTLAVGRVKFFGRHHGEVNSSAFSPDGRRLL-TASEDGCVYGWETQ-SGRLLWRLSGHAG 64

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +SPD       S       + +     +    + +  + S     +SP    +A
Sbjct: 65  PVKFCRFSPDGRLFATTSC---DCTIRLWDVAETKCLHVLKGHQRSVETVSFSPDSKQLA 121

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +        V    G   R L +  + +Q+  ++P   SL       G   S +   
Sbjct: 122 SGGWDKRVKLWEVQS--GQMLRHLGDHRDSIQSSDFAPGSDSLA-----TGSWDSTICIW 174

Query: 422 DL 423
           DL
Sbjct: 175 DL 176



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 59/164 (35%), Gaps = 9/164 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    FSP+ +++  A+ D      VY  +T+  R   R+      +   RF
Sbjct: 16  FFGRHHGEVNSSAFSPDGRRLLTASEDG----CVYGWETQSGRLLWRLSGHAGPVKFCRF 71

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G R   +   D  + ++ V  ++     L        + S+SPDS Q+         
Sbjct: 72  SPDG-RLFATTSCDCTIRLWDV-AETKCLHVLKGHQRSVETVSFSPDSKQLA---SGGWD 126

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +++ + +       R   D   S     ++P  D +A   +   
Sbjct: 127 KRVKLWEVQSGQMLRHLGDHRDSIQSSDFAPGSDSLATGSWDST 170



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 64/204 (31%), Gaps = 14/204 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +        +   RFSP+ +  A  + D      + L D    +    +   +  +    
Sbjct: 57  WRLSGHAGPVKFCRFSPDGRLFATTSCD----CTIRLWDVAETKCLHVLKGHQRSVETVS 112

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS + K+   S   D+ + ++ V         L +      S+ ++P S  +   S    
Sbjct: 113 FSPDSKQLA-SGGWDKRVKLWEVQ-SGQMLRHLGDHRDSIQSSDFAPGSDSLATGS---W 167

Query: 325 KEQLYVMQSNGSDQ---KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              + +            +  +    +     +S  G L+A   +  +   I        
Sbjct: 168 DSTICIWDLRMGTPVIFHQELEGHSGNISCLCYSASG-LLASGSWD-KTIHIWKPSTRSL 225

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
             +L    + +++  +SP    L 
Sbjct: 226 LVQLKGHVTWVKSIAFSPDASQLA 249



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 74/220 (33%), Gaps = 16/220 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             ++ + D       ++     + +    FSP+ +++A   +D     RV L + +  + 
Sbjct: 84  DCTIRLWDVAETKCLHVLKGHQRSVETVSFSPDSKQLASGGWDK----RVKLWEVQSGQM 139

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISA 307
            + +G+ R  I +  F+        +   D  + I+ + + +     + L          
Sbjct: 140 LRHLGDHRDSIQSSDFAPGSDSLA-TGSWDSTICIWDLRMGTPVIFHQELEGHSGNISCL 198

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            YS         +     + +++ + +        +          +SP    +A    +
Sbjct: 199 CYSASG----LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDASQLA---SA 251

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
           G    + V   +  +    ++       A  ++P G+ L+
Sbjct: 252 GYSHMVKVWDCNTGKCIETLKGVLDVAHACAFTPDGKLLV 291



 Score = 36.9 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 5/119 (4%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +Q + G  G+ +      S  + SG    ++ +      ++          +    FSP+
Sbjct: 185 HQELEGHSGNISCLCYSASGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPD 244

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
             ++A A Y       V + D    +  + +     +  A  F+ +GK  L+S   D+A
Sbjct: 245 ASQLASAGYSH----MVKVWDCNTGKCIETLKGVLDVAHACAFTPDGK-LLVSGAADQA 298


>gi|189468040|ref|ZP_03016825.1| hypothetical protein BACINT_04434 [Bacteroides intestinalis DSM
           17393]
 gi|189436304|gb|EDV05289.1| hypothetical protein BACINT_04434 [Bacteroides intestinalis DSM
           17393]
          Length = 785

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 77/245 (31%), Gaps = 49/245 (20%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +I   IS  I   +               + +VSG  +           NI  + P    
Sbjct: 47  RIMKQISIAILLCLCTLASFAQDGQALDLKDIVSGKFRAE---------NIYGVIPIPGD 97

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
                + +P   ++   ++     + V            +  +  S      FS +G + 
Sbjct: 98  GEHYSQMNPEGTQIIKYSFKTGKPVEVLFDAATARECTFKTFDSYS------FSPDGTKL 151

Query: 273 LISVQKDEAMD--------IYSV--DLQS---NATERLTNTLFINISASYSPDSSQIVFE 319
           LI+ +              IYS+  ++     N  E+L++         +SPD + + F 
Sbjct: 152 LIATETTPIYRHSYTAVHYIYSLKRNINGEINNIVEKLSDG-GPQQVPVFSPDGTMVAFV 210

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASY---FDPVW--------------SPQGDLIA 362
            D        V    G+ + ++++D + +      P W              S    +IA
Sbjct: 211 RD---NNIYLVKFLYGNSESQVTEDGKRNAILNGIPDWVYEEEFSFNRALEFSADNKMIA 267

Query: 363 FTKFS 367
           + +F 
Sbjct: 268 YIRFD 272



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 65/500 (13%), Positives = 151/500 (30%), Gaps = 128/500 (25%)

Query: 18  CLLLVLIGGFFP--TSIHAFVKVATNSANYSPVSIAF-------TKFVSIDELGGKVSEV 68
            L + +   F P    +   +++         +SIA          F    +    + ++
Sbjct: 26  TLFIYIFSVFIPIFAPLKKPIRI------MKQISIAILLCLCTLASFAQDGQ-ALDLKDI 78

Query: 69  VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           V      S  F     ++    I  P     +   N  G Q++   +   +    + V  
Sbjct: 79  V------SGKFR---AENIYGVIPIPGDGEHYSQMNPEGTQII---KYSFKTGKPVEV-- 124

Query: 129 RLWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
            L+D    ++   K    +  SP   + +  T +  IY+             ++  +  +
Sbjct: 125 -LFDAATARECTFKTFDSYSFSPDGTKLLIATETTPIYRHSYT-----AVHYIYSLKRNI 178

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G I N +  +  DG   +            P FSP+   VA+   ++     +YL+   
Sbjct: 179 NGEINNIVEKL-SDGGPQQV-----------PVFSPDGTMVAFVRDNN-----IYLVKFL 221

Query: 246 IDRAPKRIGNFR------------------SMILAPRFSSNGKRALI------------- 274
              +  ++                      S   A  FS++ K                 
Sbjct: 222 YGNSESQVTEDGKRNAILNGIPDWVYEEEFSFNRALEFSADNKMIAYIRFDETEVPSYSF 281

Query: 275 --------------------------SVQKDEAMDIYSVDLQSNATERL---TNTLFINI 305
                                     + + +  + +++ D++S  T ++    +      
Sbjct: 282 PVFAGSNPHITAFEKYPGDYTYKYPKTGEANSKVSVHTFDIKSKVTRKMQVPMDADGYIP 341

Query: 306 SASYSPDSSQIVFESDREGKEQL--YVMQSNGSDQKRISQD------KEASYFDPVWSPQ 357
              ++ D +++   +    + +L  Y      +  K++ +D      KEA + + ++ P+
Sbjct: 342 RIRFTHDPNKLAIITLNRHQNRLDMYFGDPRSTVCKQVLRDESDAYIKEAVFDNIIFYPE 401

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTG 415
               +F         +      G+  + +   +        W     S  F+  ++    
Sbjct: 402 N--FSFVSEKSGYNHLYWYSMGGNLLKQVTAGNYEVKDFLGWDADDNSFYFTSNEESPLR 459

Query: 416 SKLYSIDLNGRNETLINTPA 435
             +Y ID  G+   L   P 
Sbjct: 460 KAVYKIDRKGKKTKLSTQPG 479



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 54/153 (35%), Gaps = 28/153 (18%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-------- 361
           +P+ +QI+  S + GK    +  +     +  +     SY    +SP G  +        
Sbjct: 105 NPEGTQIIKYSFKTGKPVEVLFDAAT--ARECTFKTFDSY---SFSPDGTKLLIATETTP 159

Query: 362 AFTKFSGEKFAIGVMKKDGSQE-----RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            +         I  +K++ + E       L +    Q P +SP G  + F R  +     
Sbjct: 160 IYRHSYTAVHYIYSLKRNINGEINNIVEKLSDGGPQQVPVFSPDGTMVAFVRDNNIYLVK 219

Query: 417 KLY-----SIDLNGRNETLINTPAYASDPQWVG 444
            LY      +  +G+   ++N       P WV 
Sbjct: 220 FLYGNSESQVTEDGKRNAILN-----GIPDWVY 247


>gi|156376725|ref|XP_001630509.1| predicted protein [Nematostella vectensis]
 gi|156217532|gb|EDO38446.1| predicted protein [Nematostella vectensis]
          Length = 442

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 63/195 (32%), Gaps = 13/195 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +     Y          + +          +I    + ++A R+S +G+  L     
Sbjct: 56  WSSDS---LYVLCAMFKRSLIQVWSLEKPDWTCKIDEGSAGLVAARWSPDGRHVL--STA 110

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + I    L S +   +           +S D   +     R  K+ + +   +    
Sbjct: 111 DFQIRITVWSLISKSVSYIRYPKHAYEGLDFSKDGKYMALAERRNCKDFVSIFACDSWKL 170

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-----ERLLVEDSNLQ 393
            +  + + +   D  WSP G ++         + + +   DG Q        L     ++
Sbjct: 171 LKHFEAETSDLADLAWSPDGQVLCLWDHV-VNYTLYLYSLDGRQIASYSAYQLALG--IK 227

Query: 394 APTWSPSGRSLIFSR 408
           +  WSPS + L    
Sbjct: 228 SVCWSPSSQFLAIGS 242



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 17/157 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+SP+ + V         I    L+   +         +  +     FS +GK   ++ +
Sbjct: 98  RWSPDGRHVLSTADFQIRITVWSLISKSVSYIRYPKHAYEGLD----FSKDGKYMALAER 153

Query: 278 KD--EAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESDREGKEQLYVM 331
           ++  + + I++ D     + +L        S     ++SPD  Q++   D      LY+ 
Sbjct: 154 RNCKDFVSIFACD-----SWKLLKHFEAETSDLADLAWSPDG-QVLCLWDHVVNYTLYLY 207

Query: 332 QSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFS 367
             +G      S  + A       WSP    +A   F 
Sbjct: 208 SLDGRQIASYSAYQLALGIKSVCWSPSSQFLAIGSFD 244



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 57/181 (31%), Gaps = 9/181 (4%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S NGK     VQ      +   D+++    +L   L       +S DS  ++    +  
Sbjct: 16  LSPNGKFMATCVQ----YRLIIRDVKTLQILQLYTCLDNIQFIEWSSDSLYVLCAMFK-- 69

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +  + V      D      +  A      WSP G  +     +  +  I V         
Sbjct: 70  RSLIQVWSLEKPDWTCKIDEGSAGLVAARWSPDGRHVL--STADFQIRITVWSLISKSVS 127

Query: 385 LLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +    +  +   +S  G+ +  + +++      +++ D     +      +  +D  W 
Sbjct: 128 YIRYPKHAYEGLDFSKDGKYMALAERRNCKDFVSIFACDSWKLLKHFEAETSDLADLAWS 187

Query: 444 G 444
            
Sbjct: 188 P 188


>gi|39577682|gb|AAR28449.1| Tup1p [Pichia angusta]
          Length = 602

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 73/223 (32%), Gaps = 32/223 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---------ILAPRFSSN 268
           RFS + + +A        +  V   D     + +   +             I +  FS +
Sbjct: 287 RFSKDGKFLATGCNKLTQVFSVETGDLVARLSDESSASSNGSYDTDTGDLYIRSVCFSPD 346

Query: 269 GKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           GK    +  +D+ + I+  DL +    + L        S  + PD S++V  S   G   
Sbjct: 347 GKFLA-TGAEDKIIRIW--DLATRTIVKYLKGHEQDIYSLDFFPDGSKLVSGS---GDRT 400

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +          ++   E        SP G LIA          + V   +       +
Sbjct: 401 VRIWDVFTGQCS-LTLSIEDGVTTVAASPDGKLIAAGSLDRT---VRVWDANQGFLVERL 456

Query: 388 EDSN---------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +N         + +  ++  G+ +        D   KL+S+
Sbjct: 457 DSANESGNGHMDSVYSVAFTHDGKEIA---SGSLDRTVKLWSL 496



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 17/169 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +N  Y T + D  +    FSP+ + +A    D      + + D       K +      I
Sbjct: 325 SNGSYDTDTGDLYIRSVCFSPDGKFLATGAEDK----IIRIWDLATRTIVKYLKGHEQDI 380

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFE 319
            +  F  +G + + S   D  + I+  D+ +      L+    +   A+ SPD   I   
Sbjct: 381 YSLDFFPDGSKLV-SGSGDRTVRIW--DVFTGQCSLTLSIEDGVTTVAA-SPDGKLIAAG 436

Query: 320 S-DR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           S DR     +  +   V + + +++         S +   ++  G  IA
Sbjct: 437 SLDRTVRVWDANQGFLVERLDSANESG--NGHMDSVYSVAFTHDGKEIA 483


>gi|30264427|ref|NP_846804.1| TolB domain-containing protein [Bacillus anthracis str. Ames]
 gi|47529879|ref|YP_021228.1| TolB domain-containing protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187247|ref|YP_030499.1| TolB domain-containing protein [Bacillus anthracis str. Sterne]
 gi|49481416|ref|YP_038407.1| TolB domain-containing protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|65321723|ref|ZP_00394682.1| COG0823: Periplasmic component of the Tol biopolymer transport
           system [Bacillus anthracis str. A2012]
 gi|165872755|ref|ZP_02217383.1| tolB domain protein [Bacillus anthracis str. A0488]
 gi|167634672|ref|ZP_02392992.1| tolB domain protein [Bacillus anthracis str. A0442]
 gi|167638515|ref|ZP_02396791.1| tolB domain protein [Bacillus anthracis str. A0193]
 gi|170687455|ref|ZP_02878672.1| tolB domain protein [Bacillus anthracis str. A0465]
 gi|170707426|ref|ZP_02897880.1| tolB domain protein [Bacillus anthracis str. A0389]
 gi|177653229|ref|ZP_02935481.1| tolB domain protein [Bacillus anthracis str. A0174]
 gi|190566868|ref|ZP_03019784.1| tolB domain protein [Bacillus anthracis Tsiankovskii-I]
 gi|196034443|ref|ZP_03101852.1| tolB domain protein [Bacillus cereus W]
 gi|227817134|ref|YP_002817143.1| tolB domain protein [Bacillus anthracis str. CDC 684]
 gi|228916988|ref|ZP_04080548.1| TolB domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228929400|ref|ZP_04092421.1| TolB domain protein [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|229123896|ref|ZP_04253088.1| TolB domain protein [Bacillus cereus 95/8201]
 gi|229604557|ref|YP_002868645.1| tolB domain protein [Bacillus anthracis str. A0248]
 gi|254684111|ref|ZP_05147971.1| tolB domain protein [Bacillus anthracis str. CNEVA-9066]
 gi|254721944|ref|ZP_05183733.1| tolB domain protein [Bacillus anthracis str. A1055]
 gi|254736458|ref|ZP_05194164.1| tolB domain protein [Bacillus anthracis str. Western North America
           USA6153]
 gi|254741496|ref|ZP_05199183.1| tolB domain protein [Bacillus anthracis str. Kruger B]
 gi|254750934|ref|ZP_05202973.1| tolB domain protein [Bacillus anthracis str. Vollum]
 gi|254757738|ref|ZP_05209765.1| tolB domain protein [Bacillus anthracis str. Australia 94]
 gi|300119177|ref|ZP_07056874.1| tolB domain protein [Bacillus cereus SJ1]
 gi|30259085|gb|AAP28290.1| tolB domain protein [Bacillus anthracis str. Ames]
 gi|47505027|gb|AAT33703.1| tolB domain protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181174|gb|AAT56550.1| tolB domain protein [Bacillus anthracis str. Sterne]
 gi|49332972|gb|AAT63618.1| possible tolB domain protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|164711531|gb|EDR17080.1| tolB domain protein [Bacillus anthracis str. A0488]
 gi|167513363|gb|EDR88733.1| tolB domain protein [Bacillus anthracis str. A0193]
 gi|167530124|gb|EDR92859.1| tolB domain protein [Bacillus anthracis str. A0442]
 gi|170127670|gb|EDS96543.1| tolB domain protein [Bacillus anthracis str. A0389]
 gi|170668650|gb|EDT19396.1| tolB domain protein [Bacillus anthracis str. A0465]
 gi|172081511|gb|EDT66583.1| tolB domain protein [Bacillus anthracis str. A0174]
 gi|190561859|gb|EDV15828.1| tolB domain protein [Bacillus anthracis Tsiankovskii-I]
 gi|195992985|gb|EDX56944.1| tolB domain protein [Bacillus cereus W]
 gi|227004135|gb|ACP13878.1| tolB domain protein [Bacillus anthracis str. CDC 684]
 gi|228659198|gb|EEL14846.1| TolB domain protein [Bacillus cereus 95/8201]
 gi|228830188|gb|EEM75804.1| TolB domain protein [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228842595|gb|EEM87683.1| TolB domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|229268965|gb|ACQ50602.1| tolB domain protein [Bacillus anthracis str. A0248]
 gi|298723397|gb|EFI64142.1| tolB domain protein [Bacillus cereus SJ1]
          Length = 410

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 88/248 (35%), Gaps = 51/248 (20%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY   + ++ L +Y +     +
Sbjct: 35  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSYDGEWLAYVKGEKQNTLELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K++  F S +   ++S               +  + V+ ++   E ++  +      +
Sbjct: 86  DGKKVTPFHSEVSNYQWSPTENIIAFIFT--GTLHTFKVEKKNADFENVSAGVGDY---A 140

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-------------------- 348
           + P+  + +  S+       +     G+    + +D   +                    
Sbjct: 141 WYPNGKKFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHDDFLAL 196

Query: 349 -YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWS 398
                 WSP    I+F       +S +   + +++ DGS+     ++L+     +   W+
Sbjct: 197 VASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK---WA 253

Query: 399 PSGRSLIF 406
           P+   L +
Sbjct: 254 PANNILAY 261



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 10/87 (11%)

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  IAF +       + + K DG +E+ L +   +  P WS  G  L + + +      +
Sbjct: 28  GVKIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSYDGEWLAYVKGEK-QNTLE 80

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           LY +  +G+  T  ++    S+ QW  
Sbjct: 81  LYRLK-DGKKVTPFHS--EVSNYQWSP 104


>gi|262193521|ref|YP_003264730.1| WD40 repeat, subgroup [Haliangium ochraceum DSM 14365]
 gi|262076868|gb|ACY12837.1| WD40 repeat, subgroup [Haliangium ochraceum DSM 14365]
          Length = 840

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 74/233 (31%), Gaps = 18/233 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     S+ + D     +  +       ++    +P+  +    + D    +R++ +   
Sbjct: 102 SASNDASVRLWDARSGALLAVLDGHGGTVWSVALAPDGSRAL--SGDQGGAVRLWRIARS 159

Query: 246 IDRAPKRIGN----FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                  + +        + +  F+ +G R   +    +           +   R+    
Sbjct: 160 GADCSAELVSSNDAHGQAVWSVAFAPDGAR--YASAGADRCVRMWDSASGSEIGRMDGHE 217

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               S ++SP+ S++   S DR     + +            +  E       +SP G L
Sbjct: 218 DTVWSLAFSPEGSRLASGSADRS----IRLWDVATLQPVGRLEGHEHGVAGVGFSPDGRL 273

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKD 411
           +A         ++ +     S++          A    W+PSG  ++ S  +D
Sbjct: 274 LASASSD---HSVRLWDARASRQVACFHAPEDYAWRVLWAPSGAFVVSSHHRD 323



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 80/260 (30%), Gaps = 45/260 (17%)

Query: 105 SLGAQVL---VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK--------KFFSSPASWR- 152
           + G Q L     G ++    +      RLWD +    +               +P   R 
Sbjct: 85  ARGIQALSLSADGTLLASASN--DASVRLWDARSGALLAVLDGHGGTVWSVALAPDGSRA 142

Query: 153 ------------KIAHTISDDIYQSIT--GEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
                       +IA + +D   + ++     G     + F  +           CV   
Sbjct: 143 LSGDQGGAVRLWRIARSGADCSAELVSSNDAHGQAVWSVAFAPDGARYASAGADRCVRMW 202

Query: 199 DGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D A+   +      +  ++   FSP   ++A  + D      + L D    +   R+   
Sbjct: 203 DSASGSEIGRMDGHEDTVWSLAFSPEGSRLASGSADR----SIRLWDVATLQPVGRLEGH 258

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDS 313
              +    FS +G+    S   D ++ ++     + A+ ++         A    ++P  
Sbjct: 259 EHGVAGVGFSPDGRLLA-SASSDHSVRLW----DARASRQVACFHAPEDYAWRVLWAPSG 313

Query: 314 SQIVFESDREGKEQLYVMQS 333
               F      ++ + +  +
Sbjct: 314 ---AFVVSSHHRDIVRIWDA 330


>gi|294658631|ref|XP_460975.2| DEHA2F14058p [Debaryomyces hansenii CBS767]
 gi|202953272|emb|CAG89333.2| DEHA2F14058p [Debaryomyces hansenii]
          Length = 777

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 65/215 (30%), Gaps = 20/215 (9%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D + +  V+  D   +   +++      +    FS + +   IS  +D+ + ++S+D
Sbjct: 468 WSLDGKPLKSVFKKDKYNNDNSRKLIGHSGPVYGVSFSPDNRYL-ISGSEDKTVRLWSLD 526

Query: 289 LQSNATERLTNTLFINISASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             S     L +    N    +    SP        S     +   +  ++     RI   
Sbjct: 527 SYSA----LVSYKGHN-QPIWDVKFSPFGHYFATASH---DQTARLWATDHIYPLRIFAG 578

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                    + P  + + FT  S +   +  ++   S    +     +     S  GR L
Sbjct: 579 HINDVDCIEFHPNSNYV-FTGSSDKTCRMWDVQTGNSVRIFMGHTGPVNCMAVSSDGRWL 637

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                   D    ++     G    L     +   
Sbjct: 638 A---SAGEDGVVNIWDA---GSGRRLKTMRGHGRS 666


>gi|254389385|ref|ZP_05004613.1| WD-40 repeat-containing protein [Streptomyces clavuligerus ATCC
            27064]
 gi|294817066|ref|ZP_06775708.1| Putative WD-repeat containing protein [Streptomyces clavuligerus ATCC
            27064]
 gi|326445872|ref|ZP_08220606.1| hypothetical protein SclaA2_32627 [Streptomyces clavuligerus ATCC
            27064]
 gi|197703100|gb|EDY48912.1| WD-40 repeat-containing protein [Streptomyces clavuligerus ATCC
            27064]
 gi|294321881|gb|EFG04016.1| Putative WD-repeat containing protein [Streptomyces clavuligerus ATCC
            27064]
          Length = 1389

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 81/258 (31%), Gaps = 36/258 (13%)

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-----------------------EDILR 238
             +R         +    FSP+ + +A  + D+                       +    
Sbjct: 800  RVRAELTGHTDDVNTAAFSPDGRLLATGSTDNTVRVWDLEDLEVSAVSEESEKLDKSGKP 859

Query: 239  VYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDE-AMDIYSVDLQSNAT 294
                D      P+ +   R     +++  F+ +G        K    +   S      A 
Sbjct: 860  EEWGDPARTARPRPLATLRGHRDTVVSAAFAPDGHTLATGDWKGGVRLWDLSRPAAPRAL 919

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DP 352
              L       + A+++P  + +V  + ++   +L+ + ++    +R +     +    D 
Sbjct: 920  AELPPVGGP-VRATFAPAGNLLV-TAGQDRTVRLWDL-TDPRHPRRTAALGGHTDTVRDL 976

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQAPT-WSPSGRSLIFSRK 409
              SP G  +A    +     +  ++      + R+L   +N      +SP GR L  +  
Sbjct: 977  RVSPDGTRLATVA-ADRTVRLWPLRDGRVTGEPRVLTGHTNAVVAADFSPDGRFLATASD 1035

Query: 410  KDGDTGSKLYSIDLNGRN 427
                    L S+ L G  
Sbjct: 1036 DRTARVWDLASLGLTGHT 1053



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 102/309 (33%), Gaps = 43/309 (13%)

Query: 82   ISQDSFKQKITNPDSIPRFQDWNSLGA--QVLVTGRVIKEG----KDRLRVEFRLWDVKD 135
            + +    ++  +P    R +   +L      +V+     +G        +   RLWD+  
Sbjct: 853  LDKSGKPEEWGDPARTARPRPLATLRGHRDTVVSAAFAPDGHTLATGDWKGGVRLWDLSR 912

Query: 136  RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
                        PA+ R +A          +    G   +        +V+     ++ +
Sbjct: 913  ------------PAAPRALA---------ELPPVGGPVRATFAPAGNLLVTAGQDRTVRL 951

Query: 196  MDR-DGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY-LMDTRIDRAPK 251
             D  D  + R           + + R SP+  ++A    D    +R++ L D R+   P+
Sbjct: 952  WDLTDPRHPRRTAALGGHTDTVRDLRVSPDGTRLATVAAD--RTVRLWPLRDGRVTGEPR 1009

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             +    + ++A  FS +G+    +   D    ++  DL S     LT         +  P
Sbjct: 1010 VLTGHTNAVVAADFSPDGRFLA-TASDDRTARVW--DLASLG---LTGHTDAVYGVALHP 1063

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
               ++      +   +L+ + + G  +   R++    A   D  ++  G L+A       
Sbjct: 1064 -GGRLAATGSFDRTVRLWSVTAPGDHRPGARLTGHGSA-VNDVAFNRTGTLLASASADHT 1121

Query: 370  KFAIGVMKK 378
                     
Sbjct: 1122 VRLWHATDP 1130



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 84/217 (38%), Gaps = 15/217 (6%)

Query: 126  VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
            V    +D + R  ++        A     A+     +   +TG     ++ +L      V
Sbjct: 1146 VNTAAFDSQGRGTLLLTGGTDRAARLWDTANPAHPRLLSRLTGHTDGIDAALL-RGPLAV 1204

Query: 186  SGIIKNSLCVMDR-DGANIRY--LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +     ++ + D  D A  R   +  +    +     SP+ + +A A+ D    +R++ +
Sbjct: 1205 TASADRTVRLWDVTDPARPRPTAVLRAHADAVKSIALSPDGRHLATASAD--GTIRLWDL 1262

Query: 243  DTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER----L 297
              R   R P+ +      + A  FS++G R   S   D A+ ++S  L++ +  R    L
Sbjct: 1263 GDRAHPRPPRTLTGHTDTVHAVAFSADGHRLA-SAGADHAVRVWS--LRTGSDPRPYATL 1319

Query: 298  TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            T       + +++     ++    ++G   L+ + + 
Sbjct: 1320 TGHRDTVYALAFAARGDTLL-TGGQDGVALLWTLDTG 1355


>gi|195494095|ref|XP_002094692.1| GE20071 [Drosophila yakuba]
 gi|194180793|gb|EDW94404.1| GE20071 [Drosophila yakuba]
          Length = 391

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 81/256 (31%), Gaps = 55/256 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  +  D A  R+ T     I    RF P+  ++A ++ D      V L +        R
Sbjct: 1   MQGLFSDPALERHFTGHSGGITQL-RFGPDGNQIATSSTDS----TVILWNLSQAARCIR 55

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-------------------SVDLQSNA 293
             +  + +    +S  G     S   D  + I+                   SVD  S  
Sbjct: 56  FASHSAAVNGVAWSPKGNLVA-SAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTG 114

Query: 294 TERLTNTLF----------------------INISASYSPDSSQIVFESDREGKEQLYVM 331
              LT +                           SA +SP+   +   SD    + + + 
Sbjct: 115 HLMLTASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASD---DKSVRIY 171

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VED 389
             +  +  R   ++ A+     W P G+++A          I +    GSQ   L  V  
Sbjct: 172 DVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCN---RIKIFDVAGSQLLQLYVVHS 228

Query: 390 SNLQAPTWSPSGRSLI 405
           + +    + PSG  L+
Sbjct: 229 APVNDVAFHPSGHFLL 244


>gi|300121700|emb|CBK22275.2| unnamed protein product [Blastocystis hominis]
          Length = 533

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 70/169 (41%), Gaps = 26/169 (15%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDRE 323
           +S +G+  L S    + ++I +V   ++   R T      +  A +SPDSS I+    R 
Sbjct: 83  YSPDGQYLLFS--NGKEVEILTV---TDQVIRFTLYCSDRVDYAEWSPDSSHILCLVRRN 137

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  +++ +Q+   +     ++ ++S     W+P  + I        + +I  ++     +
Sbjct: 138 GSVEVFSLQNLSWNVA--FRNDDSSILSVRWAPDNEHILVLNECALQTSIWSIR----SK 191

Query: 384 RLLVEDS---NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           RL+         +  ++S  G+ L F           L+ +  NG ++ 
Sbjct: 192 RLITLPGFRDLRRYCSFSQDGKWLAF-----------LHRLSTNGTHQQ 229



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 53/148 (35%), Gaps = 20/148 (13%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           YSPD   ++F S+ +  E L V         R +           WSP    I       
Sbjct: 83  YSPDGQYLLF-SNGKEVEILTVTD----QVIRFTLYCSDRVDYAEWSPDSSHILCLVRRN 137

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               +  ++          +DS++ +  W+P    ++   +      + ++SI    R++
Sbjct: 138 GSVEVFSLQNLSWNVAFRNDDSSILSVRWAPDNEHILVLNECA--LQTSIWSI----RSK 191

Query: 429 TLINTPAY---------ASDPQWVGFMD 447
            LI  P +         + D +W+ F+ 
Sbjct: 192 RLITLPGFRDLRRYCSFSQDGKWLAFLH 219



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 62/151 (41%), Gaps = 16/151 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTR-IDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +SP+ Q + ++   + +IL V     R       R+           +S +    L  V+
Sbjct: 83  YSPDGQYLLFSNGKEVEILTVTDQVIRFTLYCSDRVDYAE-------WSPDSSHILCLVR 135

Query: 278 KDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           ++ +++++S+ +L  N   R  N     +S  ++PD+  I+  ++   +  ++ ++    
Sbjct: 136 RNGSVEVFSLQNLSWNVAFR--NDDSSILSVRWAPDNEHILVLNECALQTSIWSIR---- 189

Query: 337 DQKRISQDKEASY-FDPVWSPQGDLIAFTKF 366
            ++ I+            +S  G  +AF   
Sbjct: 190 SKRLITLPGFRDLRRYCSFSQDGKWLAFLHR 220


>gi|302924651|ref|XP_003053937.1| hypothetical protein NECHADRAFT_57721 [Nectria haematococca mpVI
           77-13-4]
 gi|256734878|gb|EEU48224.1| hypothetical protein NECHADRAFT_57721 [Nectria haematococca mpVI
           77-13-4]
          Length = 247

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 89/240 (37%), Gaps = 15/240 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++ SG +  ++ + +         T      +     S + + +A   +D+     V +
Sbjct: 16  NTLASGSLDQTIRLWELASPTSPSKTFLAHANIMSVAISTDGRYLASGAHDN----LVRV 71

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D         +    S I +   S +G+    S   D  + ++  DL+ N  E L + +
Sbjct: 72  WDLESGDLALELSGHDSSIASVALSPDGRYLA-SGSLDMTIRLW--DLKGNLVETLDDHI 128

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGD 359
               + ++SP++S++   S    K  +      G   K++   +  + F     ++  G+
Sbjct: 129 GCVHAVAFSPNNSRLA--SGSSDKTVILWDTRPGKPIKQLLCLRGHTDFVWSVAFTHDGE 186

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +A +  + +   I  +        L   +  + +  +SPS   L  + K   D   +++
Sbjct: 187 RLA-SGSADKTIIIWDVATSQKIHVLRGHEDAVFSVAFSPSAYRLASASK---DKNVRIW 242


>gi|242791696|ref|XP_002481807.1| catabolite degradation protein, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218718395|gb|EED17815.1| catabolite degradation protein, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 804

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 78/234 (33%), Gaps = 23/234 (9%)

Query: 185 VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V+     S+ + D  D  ++ +        +    +SP+  K+   + D        + D
Sbjct: 503 VTTSKDKSVIIYDATDKFSVIHKFYEHHDAVVFATWSPDDSKIITCSQDK----TAKVWD 558

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            +  R    I +   ++ +  ++ +G+   ++   D    +    L+S     +    F 
Sbjct: 559 VQTGRCFMTIEHHTDIVTSAAWAPDGET-FVTASMDNKAPLCYWGLRSRNPIHVWRGGFR 617

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               + +PD +++V  SD E  ++LYV       ++     K         S     +  
Sbjct: 618 AQDCAITPDGTRLV-ASDNE--DKLYVYDLASRAEEFCLSLKNH-ITSVSVSHDSRYVLL 673

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              +     I +M  + ++     +            G  +I  R + G  G  
Sbjct: 674 NLRNN---QIQLMDIETTEVVRRFDGQKQ--------GEWVI--RSRFGGAGEN 714



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 61/177 (34%), Gaps = 9/177 (5%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           ++    + +    FS +G + + +  KD+++ IY    + +   +        + A++SP
Sbjct: 482 QLTRHSNEVWYVEFSHDGTKLV-TTSKDKSVIIYDATDKFSVIHKFYEHHDAVVFATWSP 540

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D S+I+  S     +   V            +          W+P G+         +  
Sbjct: 541 DDSKIITCSQ---DKTAKVWDVQTGRCFMTIEHHTDIVTSAAWAPDGETFVTASMDNKAP 597

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                 +  +   +       Q    +P G  L+ S  +D     KLY  DL  R E
Sbjct: 598 LCYWGLRSRNPIHVWRGGFRAQDCAITPDGTRLVASDNED-----KLYVYDLASRAE 649



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 73/208 (35%), Gaps = 12/208 (5%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V D               I+    ++P+ +    A+ D++  L  + + +R      R G
Sbjct: 556 VWDVQTGRCFMTIEHHTDIVTSAAWAPDGETFVTASMDNKAPLCYWGLRSRNPIHVWR-G 614

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            FR+   A   + +G R + S   D    +Y  DL S A E   +      S S S DS 
Sbjct: 615 GFRAQDCA--ITPDGTRLVAS---DNEDKLYVYDLASRAEEFCLSLKNHITSVSVSHDSR 669

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            ++         Q+ +M    ++  R    ++   +       G    F     E   I 
Sbjct: 670 YVLLN---LRNNQIQLMDIETTEVVRRFDGQKQGEWVIRSRFGGAGENFVVSGSEDSQIY 726

Query: 375 VMKKDGSQERLLVEDSN---LQAPTWSP 399
           +  ++      +++      + A +W+P
Sbjct: 727 IWHRENGALVEVLDGHTKGCVNAISWNP 754


>gi|52145055|ref|YP_081774.1| prolyl oligopeptidase family protein [Bacillus cereus E33L]
 gi|51978524|gb|AAU20074.1| prolyl oligopeptidase family (peptidase_S9) [Bacillus cereus E33L]
          Length = 655

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/282 (10%), Positives = 81/282 (28%), Gaps = 56/282 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     +       + P +S + K   
Sbjct: 25  NISDDGKNVAFVKKTANWEDNTYRNYVWIYEKGKGQSYPLTTGDIDSIHPLWSPDSKSIA 84

Query: 274 ISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE------- 323
                 +      I+   L+  +  ++T+      +  ++P      + +  +       
Sbjct: 85  YLSSGGDGDMKNQIFVKSLEDYSEVKITDEKEGVSNFKWNPTGKGFYYITQSKECEEIKK 144

Query: 324 -----------GKEQ---------LYVMQSNGSDQK------RISQDKEASYFDPVWSPQ 357
                      GKE          +  +  N  +++      +++  K+        S  
Sbjct: 145 RKELYGDFQHVGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTDGKDFYIHGFDISND 204

Query: 358 GDLIAF----TKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS----- 407
           G  I      +        + ++  +  + + + ++     +  +SP G  + +S     
Sbjct: 205 GKNIVCMATPSLNDHMNGDLYILDVEAGELQKMNIDKLLGGSVCFSPEGSKICYSASIRE 264

Query: 408 ----RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP-QWVG 444
               R    ++  ++Y ++  G     +        P QW  
Sbjct: 265 KEYYRNHIQESTLEIYDMN-TGEVLQPLTNFDSTVMPLQWTA 305



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/295 (15%), Positives = 109/295 (36%), Gaps = 50/295 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +S+ +    S   G +KN + V   +  +   +T  ++ +    +++P  +   Y T   
Sbjct: 79  DSKSIAYLSSGGDGDMKNQIFVKSLEDYSEVKITDEKEGVSNF-KWNPTGKGFYYITQSK 137

Query: 234 -----EDILRVY--------------------LMDTRIDRAPKRIGNFRSMILAPRF--- 265
                +    +Y                        + D+  + I     +     F   
Sbjct: 138 ECEEIKKRKELYGDFQHVGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTDGKDFYIH 197

Query: 266 ----SSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               S++GK  +     S+      D+Y +D+++   +++     +  S  +SP+ S+I 
Sbjct: 198 GFDISNDGKNIVCMATPSLNDHMNGDLYILDVEAGELQKMNIDKLLGGSVCFSPEGSKIC 257

Query: 318 FE-SDREGKE--------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +  S RE +          L +   N  +  +   + +++     W+ +G  I       
Sbjct: 258 YSASIREKEYYRNHIQESTLEIYDMNTGEVLQPLTNFDSTVMPLQWTAKG--ILIRWQDK 315

Query: 369 EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             + IG++ +DG+ E L  + D  +   + +  G  + +++    +T  ++Y  D
Sbjct: 316 TNYLIGLLAEDGTVETLSEKVDGFIMDASITRDGNHITYNKAITNET-FEIYLDD 369



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 10/119 (8%)

Query: 260 ILAPRFSSNGKRALI---SVQKDEAMD---IYSVDLQSNATERLTNTLFINISASYSPDS 313
           + +   S +GK       +   ++      ++  +     +  LT     +I   +SPDS
Sbjct: 21  VSSTNISDDGKNVAFVKKTANWEDNTYRNYVWIYEKGKGQSYPLTTGDIDSIHPLWSPDS 80

Query: 314 SQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             I + S   D + K Q++V       + +I+ +KE    +  W+P G    +   S E
Sbjct: 81  KSIAYLSSGGDGDMKNQIFVKSLEDYSEVKITDEKEG-VSNFKWNPTGKGFYYITQSKE 138



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 11/115 (9%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++ +        ++   +     P+WSP   
Sbjct: 23  STNISDDGKNVAFVKKTANWEDNTYRNYVWIYEKGKGQSYPLTT-GDIDSIHPLWSPDSK 81

Query: 360 LIAFTKFSGE---KFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G+   K  I V    D S+ ++  E   +    W+P+G+   +  + 
Sbjct: 82  SIAYLSSGGDGDMKNQIFVKSLEDYSEVKITDEKEGVSNFKWNPTGKGFYYITQS 136



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/307 (14%), Positives = 102/307 (33%), Gaps = 60/307 (19%)

Query: 177 ILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDD 233
           + FV ++        +N + + ++ G    Y   + D     P +SP+ + +AY ++  D
Sbjct: 33  VAFVKKTANWEDNTYRNYVWIYEK-GKGQSYPLTTGDIDSIHPLWSPDSKSIAYLSSGGD 91

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---------------- 277
            D+     + +  D +  +I + +  +   +++  GK      Q                
Sbjct: 92  GDMKNQIFVKSLEDYSEVKITDEKEGVSNFKWNPTGKGFYYITQSKECEEIKKRKELYGD 151

Query: 278 ------KDEAMDIYSVDLQS-----------NATERLTNTLFINISAS-YSPDSSQIVFE 319
                 + +   +  ++++            N   +LT+     I     S D   IV  
Sbjct: 152 FQHVGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTDGKDFYIHGFDISNDGKNIVCM 211

Query: 320 SDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----------- 364
           +     +     LY++     + ++++ DK        +SP+G  I ++           
Sbjct: 212 ATPSLNDHMNGDLYILDVEAGELQKMNIDKLLG-GSVCFSPEGSKICYSASIREKEYYRN 270

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                   I  M   G   + L    +   P  W+  G  + +       T   +  +  
Sbjct: 271 HIQESTLEIYDMNT-GEVLQPLTNFDSTVMPLQWTAKGILIRW----QDKTNYLIGLLAE 325

Query: 424 NGRNETL 430
           +G  ETL
Sbjct: 326 DGTVETL 332


>gi|325104216|ref|YP_004273870.1| WD40-like beta Propeller containing protein [Pedobacter saltans DSM
           12145]
 gi|324973064|gb|ADY52048.1| WD40-like beta Propeller containing protein [Pedobacter saltans DSM
           12145]
          Length = 458

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 52/128 (40%), Gaps = 14/128 (10%)

Query: 295 ERLTN-TLFINISASY---SPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASY 349
            R+T     +     +   S D S++ F S D++G    + +  NG +  +++ ++    
Sbjct: 326 RRITFLEQGVQGPRHWLRTSKDGSKVFFLSKDKKGYINAFNVSPNGGEVNQVTFNEFDIQ 385

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-----LQAPTWSPSGRSL 404
                SP   L+A+   +    A+ +   +  +   + +        + A +WS  G  L
Sbjct: 386 SGINLSPNDRLLAYVANN----AVYITDLNTGKSTQISQSFLEKDKPVSAVSWSKEGSRL 441

Query: 405 IFSRKKDG 412
            ++R  DG
Sbjct: 442 FYNRFVDG 449



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/153 (11%), Positives = 53/153 (34%), Gaps = 18/153 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             +V  G+++  +  +++     R+   +          S +  KV + + D +  +  +
Sbjct: 316 RPNVPKGVMQRRITFLEQGVQGPRHWLRT----------SKDGSKVFFLSKDKKGYINAF 365

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +        +   N   +      S N +             +Y  DL +  + +++ +
Sbjct: 366 NVSPNGGEVNQVTFNEFDIQSGINLSPNDRLLAYVA----NNAVYITDLNTGKSTQISQS 421

Query: 301 LFINISA----SYSPDSSQIVFESDREGKEQLY 329
                      S+S + S++ +    +G  Q++
Sbjct: 422 FLEKDKPVSAVSWSKEGSRLFYNRFVDGWMQIF 454



 Score = 40.0 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 36/83 (43%), Gaps = 14/83 (16%)

Query: 338 QKRISQDKEASYFDP--VWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVEDS 390
           +K+++ DK+    +   ++SP G  I +   +     G    I ++  +  + + L +  
Sbjct: 34  EKQLTFDKKGHLINHTQIFSPDGKWIVYDTRNDDTKIGSTSTIEMVNIETGEIKELYKTQ 93

Query: 391 N-------LQAPTWSPSGRSLIF 406
           N       + A T+SP    +IF
Sbjct: 94  NQTEFGPGVGAATFSPKEEKVIF 116



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 24/142 (16%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ---QK 225
            KG    RI F+ + V             +DG+ + +L+  +   +     SPN     +
Sbjct: 320 PKGVMQRRITFLEQGVQGPRHWLR---TSKDGSKVFFLSKDKKGYINAFNVSPNGGEVNQ 376

Query: 226 VAYATYDDEDILR---------------VYLMDTRIDRAPKRIGNF---RSMILAPRFSS 267
           V +  +D +  +                VY+ D    ++ +   +F      + A  +S 
Sbjct: 377 VTFNEFDIQSGINLSPNDRLLAYVANNAVYITDLNTGKSTQISQSFLEKDKPVSAVSWSK 436

Query: 268 NGKRALISVQKDEAMDIYSVDL 289
            G R   +   D  M I+S+ L
Sbjct: 437 EGSRLFYNRFVDGWMQIFSLTL 458


>gi|319901200|ref|YP_004160928.1| dipeptidyl-peptidase IV [Bacteroides helcogenes P 36-108]
 gi|319416231|gb|ADV43342.1| dipeptidyl-peptidase IV [Bacteroides helcogenes P 36-108]
          Length = 736

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 59/175 (33%), Gaps = 40/175 (22%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             +V   ++     + V    T     P +  +  S      FS +G + LI+ +     
Sbjct: 60  GTQVIKYSFKTGKPVEVLFDATNARECPFKTFDSYS------FSPDGGKLLIATETTPIY 113

Query: 283 D--------IYSV--DLQSN---ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
                    +YS+  +L        E+L++         +SPD + + F  D        
Sbjct: 114 RHSYTAVHYLYSLKRNLDGKINNVVEKLSDG-GPQQVPVFSPDGNMVAFVRD---NNIFL 169

Query: 330 VMQSNGSDQKRISQDKEASY---FDPVW--------------SPQGDLIAFTKFS 367
           V    G+ + +I++D + +      P W              S    ++AF +F 
Sbjct: 170 VKLLYGNSESQITEDGKRNAILNGIPDWVYEEEFSFDRALEFSADSKMLAFVRFD 224



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 45/143 (31%), Gaps = 28/143 (19%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--------AFTKFSGEKF 371
           S + GK    +  +  ++ +        SY    +SP G  +         +        
Sbjct: 67  SFKTGKPVEVLFDA--TNARECPFKTFDSY---SFSPDGGKLLIATETTPIYRHSYTAVH 121

Query: 372 AIGVM--KKDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY-----SI 421
            +  +    DG        L +    Q P +SP G  + F R  +      LY      I
Sbjct: 122 YLYSLKRNLDGKINNVVEKLSDGGPQQVPVFSPDGNMVAFVRDNNIFLVKLLYGNSESQI 181

Query: 422 DLNGRNETLINTPAYASDPQWVG 444
             +G+   ++N       P WV 
Sbjct: 182 TEDGKRNAILN-----GIPDWVY 199



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 33/131 (25%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYL-----------MDTRIDRAPKRIGNFRSMILAPRFS 266
            FSP+  K+  AT         Y            +D +I+   +++ +     + P FS
Sbjct: 95  SFSPDGGKLLIATETTPIYRHSYTAVHYLYSLKRNLDGKINNVVEKLSDGGPQQV-PVFS 153

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------------------FINISAS 308
            +G        +D  + +  + L  N+  ++T                       + +  
Sbjct: 154 PDGNMVAFV--RDNNIFLVKL-LYGNSESQITEDGKRNAILNGIPDWVYEEEFSFDRALE 210

Query: 309 YSPDSSQIVFE 319
           +S DS  + F 
Sbjct: 211 FSADSKMLAFV 221


>gi|168702023|ref|ZP_02734300.1| RNA polymerase sigma-H factor [Gemmata obscuriglobus UQM 2246]
          Length = 618

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 75/213 (35%), Gaps = 48/213 (22%)

Query: 264 RFSSNGKRAL---IS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV- 317
            +S +GK+A+    +  +   +  +   +DL +  T  L N    +    ++PD +  + 
Sbjct: 389 AWSPDGKKAVGFRFTQPLIGPQGYEHVRIDLGAGRTTAL-NVPKYHRVVDWAPDGTWFLT 447

Query: 318 --------FESDREGKEQLYVMQSNGSDQKRISQDKEA-----SYFDPVWSPQGDLIAF- 363
                   F  +   +  L  + ++G   + +   KEA     S      SP G  +A+ 
Sbjct: 448 IRDEHSINFNLEYSTRGVLCKVSADGKTSEVLCPSKEAAEPLMSVVCAALSPDGKRVAYQ 507

Query: 364 -------------TKFSGEKFAIGVMKKDGSQERLLVEDSN----LQAP---TWSPSGRS 403
                            G    + V+    +   ++  +         P    WSP G  
Sbjct: 508 YGTTHPVKDGKETVHMPG--VRVAVLDLARNTHTVVASEPGSADVANDPFGVRWSPDGAR 565

Query: 404 L--IFSRKKDGDT---GSKLYSIDLNGRNETLI 431
           +  ++S ++ G+    G ++  +  +GR    +
Sbjct: 566 VGFLYSHRQFGELLSVGWRVGVVRADGRGAKTV 598



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 68/218 (31%), Gaps = 43/218 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRAL-- 273
            +SP+ +K     +    I        RID    R    N         ++ +G   L  
Sbjct: 389 AWSPDGKKAVGFRFTQPLIGPQGYEHVRIDLGAGRTTALNVPKYHRVVDWAPDGTWFLTI 448

Query: 274 -------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-------SYSPDSSQIVFE 319
                   +++      +  V      +E L                 + SPD  ++ ++
Sbjct: 449 RDEHSINFNLEYSTRGVLCKVSADGKTSEVL-CPSKEAAEPLMSVVCAALSPDGKRVAYQ 507

Query: 320 SD-----REGKEQLY-------VMQSNGSDQKRISQDKEASY-----FDPVWSPQGDLI- 361
                  ++GKE ++       V+    +    ++ +  ++      F   WSP G  + 
Sbjct: 508 YGTTHPVKDGKETVHMPGVRVAVLDLARNTHTVVASEPGSADVANDPFGVRWSPDGARVG 567

Query: 362 -AFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQ 393
             ++           + +GV++ DG   + +      +
Sbjct: 568 FLYSHRQFGELLSVGWRVGVVRADGRGAKTVFASDRAE 605



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 68/221 (30%), Gaps = 43/221 (19%)

Query: 266 SSNGK------RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-- 317
           + +G+      + L  +       +  V         L     +    ++SPD  + V  
Sbjct: 342 APDGRLPLNTRKGLYLLSPGAPPVVAPVKAAKGDEA-LFAAGGVPYITAWSPDGKKAVGF 400

Query: 318 -FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL---------IAFTKFS 367
            F     G +    ++ +    +  + +    +    W+P G           I F    
Sbjct: 401 RFTQPLIGPQGYEHVRIDLGAGRTTALNVPKYHRVVDWAPDGTWFLTIRDEHSINFNLEY 460

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAP-------TWSPSGRSLIFSRK-----KDGD-- 413
             +  +  +  DG    +L        P         SP G+ + +        KDG   
Sbjct: 461 STRGVLCKVSADGKTSEVLCPSKEAAEPLMSVVCAALSPDGKRVAYQYGTTHPVKDGKET 520

Query: 414 ---TGSKLYSIDLNGRNETLINT-PAY---ASDP---QWVG 444
               G ++  +DL     T++ + P     A+DP   +W  
Sbjct: 521 VHMPGVRVAVLDLARNTHTVVASEPGSADVANDPFGVRWSP 561



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 77/276 (27%), Gaps = 74/276 (26%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
            +      + +     +P    W+                  +  V FR      +  I 
Sbjct: 368 PVKAAKGDEALFAAGGVPYITAWS---------------PDGKKAVGFR----FTQPLIG 408

Query: 141 GKKFFSSPASW---RKIA------HTISDDIYQSITGEKGDFNSRILFVSESVVS--GII 189
            + +          R  A      H + D          G +   I        +     
Sbjct: 409 PQGYEHVRIDLGAGRTTALNVPKYHRVVDW------APDGTWFLTIRDEHSINFNLEYST 462

Query: 190 KNSLCVMDRDGANIRYLTPSRDQI-----LFEPRFSPNQQKVAY---ATYDDEDI----- 236
           +  LC +  DG     L PS++       +     SP+ ++VAY    T+  +D      
Sbjct: 463 RGVLCKVSADGKTSEVLCPSKEAAEPLMSVVCAALSPDGKRVAYQYGTTHPVKDGKETVH 522

Query: 237 ---LRVYLMDTRIDRAPKRIGNFRSMILA-----PRFSSNGKRALISVQKDEAMDIYSVD 288
              +RV ++D   +          S  +A      R+S +G R        +  ++ SV 
Sbjct: 523 MPGVRVAVLDLARNTHTVVASEPGSADVANDPFGVRWSPDGARVGFLYSHRQFGELLSVG 582

Query: 289 LQSNATERLTNTLFINISASYSPDSS--QIVFESDR 322
            +                     D    + VF SDR
Sbjct: 583 WRVGVVR---------------ADGRGAKTVFASDR 603


>gi|60680449|ref|YP_210593.1| putative dipeptidyl peptidase [Bacteroides fragilis NCTC 9343]
 gi|265762460|ref|ZP_06091028.1| dipeptidyl peptidase IV [Bacteroides sp. 2_1_16]
 gi|60491883|emb|CAH06642.1| putative dipeptidyl peptidase [Bacteroides fragilis NCTC 9343]
 gi|263255068|gb|EEZ26414.1| dipeptidyl peptidase IV [Bacteroides sp. 2_1_16]
          Length = 736

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 55/455 (12%), Positives = 135/455 (29%), Gaps = 113/455 (24%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F+        + I     +P  + +    A+     +      + + V   
Sbjct: 26  DLKEINSGKFSP-------ENIYGVVPMPDGEHYTQRNAEGTQIVKYSFRTGEPVEV--- 75

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             L+  +    
Sbjct: 76  VFDVTKARECPFKKFDSYQFSPDGSKILIATETKPIYRHSYT-----AVHYLYPVKRNDK 130

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   VA+   ++     ++L+    
Sbjct: 131 GVTTNNIVEKLSDGGPQQ-----------APVFSPDGNLVAFVRDNN-----IFLVKLLY 174

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALI-------------- 274
             +  ++                          A  F+++                    
Sbjct: 175 GNSESQVTEDGKLNSVLNGIPDWVYEEEFGFNRALEFNADNTMLAYVRFDESEVPSYTFP 234

Query: 275 -------------------------SVQKDEAMDIYSVDLQSNATERL---TNTLFINIS 306
                                    +   +  + +++ D++S  T ++    +       
Sbjct: 235 LFAGEAPRYDALQDYPGEYTYKYPKAGYPNSKVSVHTFDIKSKVTRQVKLPIDADGYIPR 294

Query: 307 ASYSPDSSQIV-FESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDP------VWSPQG 358
             ++ D +++     +R + +  +Y      +  K   +D+   Y +        + P  
Sbjct: 295 IRFTQDPNKLAIMTLNRHQNRFDMYFADPRSTVCKLALRDESPYYINENVFDNIQFYP-- 352

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGS 416
           +  +F         +     +G+  + +   +        W+P      ++  ++     
Sbjct: 353 EYFSFVSDKSGYPHLYWYSMNGNLIKQVTSGNYEVKNFIGWNPDTNEFYYTSNEESPMRQ 412

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWV----GFMD 447
            +Y ID  G+   L N P   S P +      FM+
Sbjct: 413 AVYKIDRKGKKMKLSNQPGTNS-PIFSSSMKYFMN 446



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 4/119 (3%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F SD+ G   LY    NG+  K+++           W+P  +   +T          V K
Sbjct: 357 FVSDKSGYPHLYWYSMNGNLIKQVTSGNYEVKNFIGWNPDTNEFYYTSNEESPMRQAVYK 416

Query: 378 KDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTP 434
            D   +++ L       +P +S       F  K        L ++ D  G+    + T 
Sbjct: 417 IDRKGKKMKLSNQPGTNSPIFS--SSMKYFMNKFTSLDTPMLITLNDNTGKVLKTLVTN 473



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 84/245 (34%), Gaps = 42/245 (17%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y     + G  NS++   +  + S + +     +D DG   R             RF+ +
Sbjct: 253 YTYKYPKAGYPNSKVSVHTFDIKSKVTRQVKLPIDADGYIPRI------------RFTQD 300

Query: 223 QQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGN----------FRSMILAPR-FSSNGK 270
             K+A  T    ++   +Y  D R       + +          F ++   P  FS    
Sbjct: 301 PNKLAIMTLNRHQNRFDMYFADPRSTVCKLALRDESPYYINENVFDNIQFYPEYFS---- 356

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--YSPDSSQIVFESDREG--KE 326
                  K     +Y   +  N  +++T+     +     ++PD+++  + S+ E   ++
Sbjct: 357 ---FVSDKSGYPHLYWYSMNGNLIKQVTSGN-YEVKNFIGWNPDTNEFYYTSNEESPMRQ 412

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTKFSGEKFAIGVMKKDGSQER 384
            +Y +   G   K +S     +   P++S         FT        I +    G   +
Sbjct: 413 AVYKIDRKGKKMK-LSNQPGTN--SPIFSSSMKYFMNKFTSLD-TPMLITLNDNTGKVLK 468

Query: 385 LLVED 389
            LV +
Sbjct: 469 TLVTN 473


>gi|47205197|emb|CAG14614.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 390

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     +T+  +  K +      +   
Sbjct: 54  QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIVWHVDTETQQLKVMKTLEGHAYGVSYL 113

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 114 AWSPDDAYLIACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 172

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 173 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCVNDGRSVLASDTHQRIRGYNFE---- 221

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 222 --DLTDRNIVQEDHPIMSFTVSKNGR 245


>gi|47205447|emb|CAG14617.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 390

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 74/206 (35%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     +T+  +  K +      +   
Sbjct: 54  QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIVWHVDTETQQLKVMKTLEGHAYGVSYL 113

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 114 AWSPDDAYLIACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 172

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    +    E      +W    G  +  +    +  G  F     
Sbjct: 173 RG---QFYQCDLDGN----LLDSWEGVRVQCLWCVNDGRSVLASDTHQRIRGYNFE---- 221

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 222 --DLTDRNIVQEDHPIMSFTVSKNGR 245


>gi|67902392|ref|XP_681452.1| hypothetical protein AN8183.2 [Aspergillus nidulans FGSC A4]
 gi|40740015|gb|EAA59205.1| hypothetical protein AN8183.2 [Aspergillus nidulans FGSC A4]
          Length = 876

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 74/188 (39%), Gaps = 17/188 (9%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A+ +     +L V+   +      K+ G+  SM  A  +S +G+R + +   D  +
Sbjct: 332 GEWLAFGSSKFGQLL-VWEWQSE-SYILKQQGHLDSMN-ALAYSPDGQRIV-TAADDGKI 387

Query: 283 DIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++  D++S       T       +  +S   + ++F S  +G  + + +     + +  
Sbjct: 388 KVW--DVKSGFCLVTFTEHTSGVTACQFSKKGN-VLFTSSLDGSVRAWDL-IRYRNFRTF 443

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TW 397
           +     S+      P G++I     S + F I V        +LL + S  + P     +
Sbjct: 444 TAPSRLSFSSLAVDPSGEVI--CAGSPDSFDIHVWSVQTG--QLLDQLSGHEGPVSALAF 499

Query: 398 SPSGRSLI 405
           +  G  L+
Sbjct: 500 AADGNHLL 507



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 65/199 (32%), Gaps = 18/199 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ Q++  A  D +    + + D +            S + A +FS  G   L +  
Sbjct: 370 AYSPDGQRIVTAADDGK----IKVWDVKSGFCLVTFTEHTSGVTACQFSKKGN-VLFTSS 424

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D ++  + + ++       T    ++ S S + D S  V  +       ++V       
Sbjct: 425 LDGSVRAWDL-IRYRNFRTFTAPSRLSFS-SLAVDPSGEVICAGSPDSFDIHVWSVQTGQ 482

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK--KDGSQERLLVE------- 388
                   E       ++  G+ +       +   +  +   +D S  R + +       
Sbjct: 483 LLDQLSGHEGPVSALAFAADGNHLLTFWSVADAVQVAGIDGRRDISGGRKITDRTTAANA 542

Query: 389 --DSNLQAPTWSPSGRSLI 405
               +    T+S  G  ++
Sbjct: 543 AGTKSFHCITYSADGSCIL 561


>gi|308047841|ref|YP_003911407.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
 gi|307630031|gb|ADN74333.1| OmpA/MotB domain protein [Ferrimonas balearica DSM 9799]
          Length = 716

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/216 (15%), Positives = 81/216 (37%), Gaps = 11/216 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG +  ++ + D    ++       D  + +  FS + + +  A++D        L D  
Sbjct: 228 SGHLDGTVRLWDLATGDLINTRYGHDDTVVDITFSQDGKWLFSASHDH----SAALWDLT 283

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R  K        + A   + NG+R  +       + ++++  ++  +E+      IN 
Sbjct: 284 DARQHKLDTEGALPLSALTANHNGRRLAL-GDIGGNLSLWNLATRTKVSEQKLLHGRIND 342

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A  S D     F +   G  +L ++ +   +   +S           +SP G  +A T 
Sbjct: 343 MAYSSNDR----FLAVAGGNGELVLLDTEAGESHTLSHPSAHGITALAFSPDGQRLA-TA 397

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           +S ++  +      G + +    +  +   +++ +G
Sbjct: 398 WSNQQLVVW-DTASGRRLQQRPTEGTIHRLSFNANG 432



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 74/236 (31%), Gaps = 20/236 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +Y T   D  +     SPN +  A    D      V L D                ++ 
Sbjct: 203 PQYTTEVNDSPVMASAISPNGRLAASGHLDG----TVRLWDLATGDLINTRYGHDDTVVD 258

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             FS +GK    S   D +  ++  DL      +L     + +SA  +  + + +   D 
Sbjct: 259 ITFSQDGKWL-FSASHDHSAALW--DLTDARQHKLDTEGALPLSALTANHNGRRLALGDI 315

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G   L+ + +     ++       +     +S     +A     G    + ++  +  +
Sbjct: 316 GGNLSLWNLATRTKVSEQKLLHGRINDM--AYSSNDRFLAVA---GGNGELVLLDTEAGE 370

Query: 383 ERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPA 435
              L   S     A  +SP G+ L         +  +L   D  +GR      T  
Sbjct: 371 SHTLSHPSAHGITALAFSPDGQRLA-----TAWSNQQLVVWDTASGRRLQQRPTEG 421



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 20/154 (12%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +Y++  Q            +  + S+SPD   +   SD  G+  L+  Q      +  ++
Sbjct: 159 LYALGAQGGQ-------PAVGPATSFSPDGG-LALASDPSGRLALW--QLAEGCPQYTTE 208

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSG 401
             ++       SP G L A     G    + +               +      T+S  G
Sbjct: 209 VNDSPVMASAISPNGRLAASGHLDGT---VRLWDLATGDLINTRYGHDDTVVDITFSQDG 265

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           + L FS     D  + L+  DL    +  ++T  
Sbjct: 266 KWL-FSASH--DHSAALW--DLTDARQHKLDTEG 294



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/245 (16%), Positives = 86/245 (35%), Gaps = 37/245 (15%)

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
                L    RLWD+     I             +  H   D +      + G +     
Sbjct: 226 AASGHLDGTVRLWDLATGDLINT-----------RYGH--DDTVVDITFSQDGKWL---- 268

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
                  S    +S  + D   A    L       L     + N +++A    D    L 
Sbjct: 269 ------FSASHDHSAALWDLTDARQHKLDTEGALPLSALTANHNGRRLALG--DIGGNLS 320

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           ++ + TR   + +++ + R   +A  +SSN +   ++       ++  +D ++  +  L+
Sbjct: 321 LWNLATRTKVSEQKLLHGRINDMA--YSSNDRFLAVA---GGNGELVLLDTEAGESHTLS 375

Query: 299 NTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSP 356
           +     I+A ++SPD  ++         +QL V  +     +R+ Q   E +     ++ 
Sbjct: 376 HPSAHGITALAFSPDGQRLATAWS---NQQLVVWDTASG--RRLQQRPTEGTIHRLSFNA 430

Query: 357 QGDLI 361
            G L+
Sbjct: 431 NGHLL 435


>gi|195590058|ref|XP_002084764.1| GD12669 [Drosophila simulans]
 gi|194196773|gb|EDX10349.1| GD12669 [Drosophila simulans]
          Length = 389

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 81/256 (31%), Gaps = 55/256 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  + RD A  R+ T     I    RF P+  ++A +  D      V L +        R
Sbjct: 1   MQGLFRDPALERHFTGHSGGITQL-RFGPDGSQIATSATDS----TVILWNLNQAARCIR 55

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-------------------SVDLQSNA 293
             +  + +    +S  G     S   D  + ++                   SVD  S  
Sbjct: 56  FASHSAAVNGVAWSPKGNLVA-SAGHDRTVKVWEPKLRGVSGEFVAHSKAVRSVDFDSTG 114

Query: 294 TERLTNTLF----------------------INISASYSPDSSQIVFESDREGKEQLYVM 331
              LT +                           SA +SP+   +   SD    + + + 
Sbjct: 115 HWMLTASDDKSAKIWRVARRTFVSSFAQQNNWVRSAKFSPNGKLVATASD---DKSVRIY 171

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VED 389
             +  +  R   ++ A+     W P G+++A          I +    GSQ   L  V  
Sbjct: 172 DVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCN---RIKIFDVSGSQLLQLYVVHS 228

Query: 390 SNLQAPTWSPSGRSLI 405
           + +    + PSG  L+
Sbjct: 229 APVNDVAFHPSGHFLL 244



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 49/150 (32%), Gaps = 13/150 (8%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
               T          + PD SQI   S  +    L+ +       +       A+     
Sbjct: 11  ERHFTGHSGGITQLRFGPDGSQIA-TSATDSTVILWNLNQAARCIR--FASHSAAVNGVA 67

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           WSP+G+L+A +        +   K  G     +     +++  +  +G  ++ +     D
Sbjct: 68  WSPKGNLVA-SAGHDRTVKVWEPKLRGVSGEFVAHSKAVRSVDFDSTGHWMLTASD---D 123

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             +K++ +             ++A    WV
Sbjct: 124 KSAKIWRV------ARRTFVSSFAQQNNWV 147


>gi|149277770|ref|ZP_01883910.1| Dipeptidyl aminopeptidase [Pedobacter sp. BAL39]
 gi|149231458|gb|EDM36837.1| Dipeptidyl aminopeptidase [Pedobacter sp. BAL39]
          Length = 724

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 70/213 (32%), Gaps = 44/213 (20%)

Query: 268 NGKRALISVQKDEAMDIYSVDL--QSNATERLTNTLFINISASYSPDSSQI--------V 317
           +G+   I++ K+E   +   D+  +S       +          S D  +         V
Sbjct: 44  DGEIVAITLPKNERKVVLGRDVIYKSGN-----DNPGDIKDFELSDDGKKALIYANSKKV 98

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +  +  G  + +V   N     +I +DK E+S     +SP G+ +A+      K  I V 
Sbjct: 99  WRYETRG--EYFVADLNTGKITKIGKDKPESSLMFAKFSPDGNKVAYVS----KHNIYVD 152

Query: 377 KKDGSQERLLVEDSNL------------------QAPTWSPSGRSLIFSRKKDGDTGSKL 418
                  + L  D                         WSP G+++ + +       + L
Sbjct: 153 DLSTQSSKALTTDGTDRMINGTFDWVYEEEFDCRDGFRWSPDGQTIAYWQINATKIRNFL 212

Query: 419 YSIDLNG--RNETLINTPAYASDPQ--WVGFMD 447
              + +        +  P    DP    +GF++
Sbjct: 213 MINNTDSIYSYNIPVEYPKVGQDPSACRLGFVN 245



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 59/344 (17%), Positives = 111/344 (32%), Gaps = 71/344 (20%)

Query: 160 DDIYQSITGEKGDFNSR----------ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           D IY+S     GD              I   S+ V     +    V D +   I  +   
Sbjct: 64  DVIYKSGNDNPGDIKDFELSDDGKKALIYANSKKVWRYETRGEYFVADLNTGKITKIGKD 123

Query: 210 R-DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL------- 261
           + +  L   +FSP+  KVAY +   +  + V  + T+  +A    G  R +         
Sbjct: 124 KPESSLMFAKFSPDGNKVAYVS---KHNIYVDDLSTQSSKALTTDGTDRMINGTFDWVYE 180

Query: 262 -------APRFSSNGKRALIS----------VQKDEAMDIYSVDL--------QSNATER 296
                    R+S +G+               +  +    IYS ++        Q  +  R
Sbjct: 181 EEFDCRDGFRWSPDGQTIAYWQINATKIRNFLMINNTDSIYSYNIPVEYPKVGQDPSACR 240

Query: 297 LT------------NTLFINISA-----SYSPDSSQIVFE--SDREGKEQLYVMQSNGSD 337
           L              T    +        + P +S+I+F+  +  + + +L+V  +    
Sbjct: 241 LGFVNVTTATTTWVATPGDMVQHYIPRMEWIPSTSEIIFQQLNREQNESKLFVANAQTGT 300

Query: 338 QKRISQDKEASY----FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            K I  + + ++        W   G    ++           + KDG +E L+ +     
Sbjct: 301 VKNIYSETDKAWVAVGSGFQWINNGKEFIWSSEKDGWNHQYRISKDGKKEILITKGDYDV 360

Query: 394 APTWSPSGR--SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                   +   L F+      T   LY   L+G  +  + TP+
Sbjct: 361 IEQSLVDEKNNLLYFTASPSNATQKYLYRTKLSGGGKPEMVTPS 404



 Score = 43.9 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 26/234 (11%), Positives = 77/234 (32%), Gaps = 51/234 (21%)

Query: 218 RFSPNQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPR------------ 264
           R+SP+ Q +AY   +   I   + + +T    +      +  +   P             
Sbjct: 190 RWSPDGQTIAYWQINATKIRNFLMINNTDSIYSYNIPVEYPKVGQDPSACRLGFVNVTTA 249

Query: 265 --------------------FSSNGKRALI-SVQKDEA-MDIYSVDLQSNATERL---TN 299
                               +  +    +   + +++    ++  + Q+   + +   T+
Sbjct: 250 TTTWVATPGDMVQHYIPRMEWIPSTSEIIFQQLNREQNESKLFVANAQTGTVKNIYSETD 309

Query: 300 TLFINISA--SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
             ++ + +   +  +  + ++ S+++G    Y +  +G  +  I++         +   +
Sbjct: 310 KAWVAVGSGFQWINNGKEFIWSSEKDGWNHQYRISKDGKKEILITKGDYDVIEQSLVDEK 369

Query: 358 GDLIAFTK--FSGEKFAIGVMKKDGSQ------ERLLVEDSNLQAPTWSPSGRS 403
            +L+ FT    +  +  +   K  G          +L    N +    SP+G  
Sbjct: 370 NNLLYFTASPSNATQKYLYRTKLSGGGKPEMVTPSILTGTHNYE---ISPTGSF 420


>gi|126661461|ref|ZP_01732517.1| hypothetical protein CY0110_29019 [Cyanothece sp. CCY0110]
 gi|126617253|gb|EAZ88066.1| hypothetical protein CY0110_29019 [Cyanothece sp. CCY0110]
          Length = 645

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 15/134 (11%)

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-------GEKFAI 373
           +RE + ++  +  N  + K +  + +  Y  P  SP G  +A+  ++       G K  +
Sbjct: 144 NRECENKVVSININNGEIKTLI-EGDNFYSSPRLSPDGTKLAWISWNHPNMPWDGTKLWL 202

Query: 374 GVMKKDG--SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             ++ DG     + +  D +  +  P WSP G+ L +   + G   S LY    N  N  
Sbjct: 203 AKIESDGALKDIKWIAGDIDESISEPKWSPDGQ-LYYVSDQSG--WSNLYCYKSNVNNVP 259

Query: 430 LINTPAYASDPQWV 443
           +    A  S P WV
Sbjct: 260 IFPFTAEFSYPHWV 273



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 91/262 (34%), Gaps = 30/262 (11%)

Query: 159 SDDIYQSITGEKGD-FNSRILFVSESVVSGIIKNSLCVMDRDGA-----NIRYLTPSRDQ 212
           SD I        G  F++  ++  E       +N L     DG      +  +   SR  
Sbjct: 18  SDLIVAKSIKLGGVVFDNDDIYWLEGRPQEKGRNVLVKYSPDGQITEITSQPFNVRSRVH 77

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR- 271
                 F      + +  Y D+      L     +  PK +    +      F  + K  
Sbjct: 78  EYGGGSFLVKDGVIYFVNYQDQR-----LYQKLPNEEPKPLT-PENQCRYADFIIDTKHN 131

Query: 272 ALISVQKDEAM-------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--- 321
            LIS+ +D +         + S+++ +   + L        S   SPD +++ + S    
Sbjct: 132 RLISICEDHSHPNRECENKVVSININNGEIKTLIEGDNFYSSPRLSPDGTKLAWISWNHP 191

Query: 322 ---REGKEQ-LYVMQSNGS--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
               +G +  L  ++S+G+  D K I+ D + S  +P WSP G  + +         +  
Sbjct: 192 NMPWDGTKLWLAKIESDGALKDIKWIAGDIDESISEPKWSPDGQ-LYYVSDQSGWSNLYC 250

Query: 376 MKKDGSQERLLVEDSNLQAPTW 397
            K + +   +    +    P W
Sbjct: 251 YKSNVNNVPIFPFTAEFSYPHW 272


>gi|304405962|ref|ZP_07387620.1| WD40 domain protein beta Propeller [Paenibacillus curdlanolyticus
           YK9]
 gi|304345205|gb|EFM11041.1| WD40 domain protein beta Propeller [Paenibacillus curdlanolyticus
           YK9]
          Length = 295

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 82/243 (33%), Gaps = 42/243 (17%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---------F 265
           +   F+P+   + +   D E    +Y          K+ G  +   LAP           
Sbjct: 56  WSFSFTPDGTTIYFQRGDYEK-YTIY----ESHYKNKKWGTPQKSKLAPETLSQDGDTFI 110

Query: 266 SSNGKRALISVQKD-----EAMDIYSVDLQS---NATERL---TNTLFINISASYSPDSS 314
           + +G +   +  +      +  DI+              L    N+ F     S + + +
Sbjct: 111 TRDGSKIFFASNRSTSGTKQDNDIWMATRSGDHWGEPSPLGEPINSGFQEWLPSVASNGN 170

Query: 315 QIVFESDREGKEQ---LYVM-QSNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTKF 366
            + F+SDR G      LYV    +G   +  S   E +       P  +P    + F + 
Sbjct: 171 -LYFQSDRPGGTGQIDLYVSKWKDGKYTEPESLGTEINTSENDESPYIAPDESYLIFAR- 228

Query: 367 SGEKFAIGVMKKD---GSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            G    I +   D     Q   L  D+     +P  SP  + L ++  K G   + +Y I
Sbjct: 229 GGSTLYISLRHGDKWSTPQPIKLPGDTGTIKYSPNVSPDSKYLFYTSNKAGT--ADVYQI 286

Query: 422 DLN 424
           D N
Sbjct: 287 DFN 289



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 70/200 (35%), Gaps = 39/200 (19%)

Query: 164 QSITGEKGDFNSR----ILFVSESVVSGIIK-NSLCVMDRDGANIRYLTPSRDQIL---- 214
           ++++ +   F +R    I F S    SG  + N + +  R G +    +P  + I     
Sbjct: 100 ETLSQDGDTFITRDGSKIFFASNRSTSGTKQDNDIWMATRSGDHWGEPSPLGEPINSGFQ 159

Query: 215 -FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR----APKRIG---NFRSMILAPRFS 266
            + P  + N   + + +       ++ L  ++        P+ +G   N      +P  +
Sbjct: 160 EWLPSVASNGN-LYFQSDRPGGTGQIDLYVSKWKDGKYTEPESLGTEINTSENDESPYIA 218

Query: 267 SN---------GKRALISVQKDE---AMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            +         G    IS++  +         +   +   +          S + SPDS 
Sbjct: 219 PDESYLIFARGGSTLYISLRHGDKWSTPQPIKLPGDTGTIK---------YSPNVSPDSK 269

Query: 315 QIVFESDREGKEQLYVMQSN 334
            + + S++ G   +Y +  N
Sbjct: 270 YLFYTSNKAGTADVYQIDFN 289



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 73/223 (32%), Gaps = 33/223 (14%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATER---LTNTLFI 303
           P  I   ++   +  F+ +G          E   IY     + +    ++      TL  
Sbjct: 45  PDLISTKQAEEWSFSFTPDGTTIYFQRGDYEKYTIYESHYKNKKWGTPQKSKLAPETLSQ 104

Query: 304 NISASYSPDSSQIVFESDR--EGKEQ---LYVMQSNGSDQKRISQDKEASYFD-----PV 353
           +     + D S+I F S+R   G +Q   +++   +G      S   E          P 
Sbjct: 105 DGDTFITRDGSKIFFASNRSTSGTKQDNDIWMATRSGDHWGEPSPLGEPINSGFQEWLPS 164

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMK---KDG------SQERLLVEDSNLQAPTWSPSGRSL 404
            +  G+L   +   G    I +     KDG      S    +    N ++P  +P    L
Sbjct: 165 VASNGNLYFQSDRPGGTGQIDLYVSKWKDGKYTEPESLGTEINTSENDESPYIAPDESYL 224

Query: 405 IFSRKKDGDTGSKLYSIDLNG---RNETLINTPAYASDPQWVG 444
           IF+R      GS LY    +G        I  P      ++  
Sbjct: 225 IFAR-----GGSTLYISLRHGDKWSTPQPIKLPGDTGTIKYSP 262


>gi|258591792|emb|CBE68093.1| exported protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 326

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 83/240 (34%), Gaps = 23/240 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+    +++ V+D +   +        +      FSP+      A     D+  V +   
Sbjct: 34  VTNQEDHTVIVIDTETNKVIDTITPGGKKPHNVAFSPDGVHAFIANAASNDVSMVDV--- 90

Query: 245 RIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
              +  K +    + I A  P  S +G++  ++     + D+  +DL+   T    +T+ 
Sbjct: 91  ---KTRKLVATLPAGIRAHGPAVSPDGRQLWVA--NPGSNDVTVIDLEGRHT---IDTIA 142

Query: 303 INISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +  + +   + P   +  + S+  G   L V+          + +          +  G 
Sbjct: 143 VGKAPALIVFDPKGVR-AYVSN-GGSGDLSVIDVKSRKIV-TTIEAGRGAMGTDVTWDGK 199

Query: 360 LIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           L+  T  +G+   I V+   +      +  D        SP G+   +   +  +  S +
Sbjct: 200 LLLVT--AGDVDQIDVIHLVNHQVAARIPRDGEPHGLVISPDGKR-AYVANRKANVVSVI 256



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 77/222 (34%), Gaps = 23/222 (10%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           A   +++   V ++DT  ++    I           FS +G  A I+     + D+  VD
Sbjct: 32  AWVTNQEDHTVIVIDTETNKVIDTITPGGKKPHNVAFSPDGVHAFIANAA--SNDVSMVD 89

Query: 289 LQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +++      T    I     + SPD  Q+   +   G   + V+   G          +A
Sbjct: 90  VKTRKLVA-TLPAGIRAHGPAVSPDGRQLWVAN--PGSNDVTVIDLEGRHTIDTIAVGKA 146

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSL 404
                V+ P+G   A+   +G    + V+     +    +E          TW   G+ L
Sbjct: 147 PAL-IVFDPKGVR-AYVS-NGGSGDLSVIDVKSRKIVTTIEAGRGAMGTDVTW--DGKLL 201

Query: 405 IFSRKKDGDTGSKLYSID--------LNGRNETLINTPAYAS 438
           + +   D D    ++ ++         +G    L+ +P    
Sbjct: 202 LVTAG-DVDQIDVIHLVNHQVAARIPRDGEPHGLVISPDGKR 242


>gi|325926541|ref|ZP_08187857.1| glutamyl peptidase [Xanthomonas perforans 91-118]
 gi|325543049|gb|EGD14496.1| glutamyl peptidase [Xanthomonas perforans 91-118]
          Length = 828

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 72/220 (32%), Gaps = 17/220 (7%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQ--KDEAMD 283
            +A        +++L+        +  G    + LA   +S + +      +     A +
Sbjct: 94  TFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASGANE 153

Query: 284 IYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQK 339
           ++ VD+ +    RL   L   +N    + PD S ++ +    R+G               
Sbjct: 154 LWLVDVAAGQARRLLAGLNTSVNDDLRWLPDGSGLLLQQQVARQGAP-PTRDAIPTGPAT 212

Query: 340 RISQDKEASYFDPVWSP----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           + +         P +      + D   F  ++  +  I  +     Q R +         
Sbjct: 213 QQTSAAAGVRSLPTYQDLLRNEADARVFEYYATGQPIIVTVA---GQVRPIATPGIYLNL 269

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           + SP GR ++   ++     S L  +D   R   +++   
Sbjct: 270 SVSPDGRYIL--SERSERPFSYLVPVDNFPRRIQVLDLQG 307



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 87/253 (34%), Gaps = 26/253 (10%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRF 219
           DI +    E      RI   + +       + L ++   DG+  +         L +  +
Sbjct: 74  DIAEVAQPELKLAGLRIHPKTFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSW 133

Query: 220 SPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQ 277
           SP+Q+ +A+   D       ++L+D    +A + +     S+    R+  +G   L+  Q
Sbjct: 134 SPDQRHLAFRREDAASGANELWLVDVAAGQARRLLAGLNTSVNDDLRWLPDGSGLLLQQQ 193

Query: 278 KDEAMDIYSVD-LQSNATERLTNTLFINIS-ASYSP----DSSQIVFESDREGKEQLYVM 331
                   + D + +    + T+      S  +Y      ++   VFE    G+  +  +
Sbjct: 194 VARQGAPPTRDAIPTGPATQQTSAAAGVRSLPTYQDLLRNEADARVFEYYATGQPIIVTV 253

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIGVMKKDG 380
                  + I+      Y +   SP G  I  ++ S   F            I V+   G
Sbjct: 254 A---GQVRPIAT--PGIYLNLSVSPDGRYIL-SERSERPFSYLVPVDNFPRRIQVLDLQG 307

Query: 381 SQERLLVEDSNLQ 393
              R + +   ++
Sbjct: 308 KLVRQIAQLPLVE 320



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 378 KDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            DGS+ ++  L    +L   +WSP  R L F R+      ++L+ +D+       +    
Sbjct: 112 ADGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASGANELWLVDVAAGQARRLLAGL 171

Query: 436 YAS---DPQWVG 444
             S   D +W+ 
Sbjct: 172 NTSVNDDLRWLP 183


>gi|292493184|ref|YP_003528623.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Nitrosococcus halophilus Nc4]
 gi|291581779|gb|ADE16236.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Nitrosococcus halophilus Nc4]
          Length = 643

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 82/261 (31%), Gaps = 68/261 (26%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIG--KKFFSSPASWRKIAH--------------- 156
           G + +          R+ +      ++     FF++    R   H               
Sbjct: 60  GEIKEINPPPYNARTRVHEYGGGAYLVAGDSVFFANFEDQRLYRHQRGTAIQPITPEGDY 119

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQIL 214
             +D I+  +         R++ V E       +  N+L  +  DG+    +  S     
Sbjct: 120 RYADAIFDGVRN-------RLICVREDHTDKTREAVNTLVSIPFDGSGQVSVLASGADFY 172

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             PR SP+  ++A+ T++   +                               +G    +
Sbjct: 173 SSPRLSPDGNRLAWLTWNHPHMPW-----------------------------DGTELWV 203

Query: 275 SVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           + Q D A  +     +   ++E +           +SP+ + + F SDR G   LY  + 
Sbjct: 204 A-QVDGAGSLGEAKPIAGGSSESI-------FQPEWSPEGT-LYFISDRTGWWNLYRWRE 254

Query: 334 NGSDQKRISQDKEASYFDPVW 354
                + ++Q   A +  P W
Sbjct: 255 E--QVEAVTQMT-AEFGLPQW 272



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 24/151 (15%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG---DLIAFTKFSGE 369
              + F +  +  ++LY     G+  + I+ + +  Y D ++   G    LI   +   +
Sbjct: 88  GDSVFFANFED--QRLYR-HQRGTAIQPITPEGDYRYADAIF--DGVRNRLICVREDHTD 142

Query: 370 KFAIGV-----MKKDG-SQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDT---GSKLY 419
           K    V     +  DG  Q  +L   ++  + P  SP G  L +           G++L+
Sbjct: 143 KTREAVNTLVSIPFDGSGQVSVLASGADFYSSPRLSPDGNRLAWLTWNHPHMPWDGTELW 202

Query: 420 S--IDLNGRNETLINTPAYASD----PQWVG 444
              +D  G           +S+    P+W  
Sbjct: 203 VAQVDGAGSLGEAKPIAGGSSESIFQPEWSP 233


>gi|258590947|emb|CBE67242.1| conserved hypothetical protein; putative mxaE, involved in methanol
           dehydrogenase (mxaE2) [NC10 bacterium 'Dutch sediment']
          Length = 322

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 76/262 (29%), Gaps = 62/262 (23%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  +V  A  +  ++  +      +                   + +GK+  +  +
Sbjct: 64  AVSPDGSRVYIANANSNNLTVIDTATLTVKATVPAGIEPEGDPEGIAVTPDGKQLYVVNE 123

Query: 278 KDEAMDIYSVDLQS---------------------NATERLTNTLF-----INISA---- 307
               +    +D  +                          +TN        I+ SA    
Sbjct: 124 NPGTVS--VIDTATHQLVATVTVGVEPETVAVSPDGRWVYVTNETSHDVHVIDTSADRVI 181

Query: 308 ------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVW 354
                       S++PD  +     +R+G     V   + + ++ I+           V 
Sbjct: 182 AKIKVGANPRGVSFTPDGKRAYVGCERDGT----VSVIDTAARRVIATIPVGERPVGTVV 237

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW---SPSGRSLIFSRKKD 411
           S  G  +      G  + + V   D    ++L +    +   W   +P GR L +     
Sbjct: 238 SHDGKKVYVAH--GRSYEVWV--LDTRTHQVLTKIPTQERSWWVALTPDGREL-YVTVHG 292

Query: 412 GDTGSKLYSIDLNGRNETLINT 433
           G   + +     +  ++ L+ T
Sbjct: 293 GGRVAVI-----DTTHDRLLTT 309


>gi|315500861|ref|YP_004079748.1| hypothetical protein ML5_0043 [Micromonospora sp. L5]
 gi|315407480|gb|ADU05597.1| hypothetical protein ML5_0043 [Micromonospora sp. L5]
          Length = 376

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 68/201 (33%), Gaps = 25/201 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++V +     ++   V L+ T  ++    +    S + A      G   L+  +
Sbjct: 153 SISPDGKRVVWVQDSTDNANGVLLIATVGEKGATTLAEGISCLGARPLRWKGDDLLMVQR 212

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           K+    +Y V       +++           +S D + +  ESD  GK  +    S+ +D
Sbjct: 213 KNRQSVLYDVTAN----KQVVGDPGQETKRCWSADGTWLAAESD--GKPYV----SDTTD 262

Query: 338 QKRISQDKEA-------SYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQER 384
            ++ +             +     S  G  +A              F   V+    S+  
Sbjct: 263 LRQYTYTPPQQEAAKWDGWEARSVSTDGRYVAVGWIGTDPSRRDGSF--AVVDTRTSKVV 320

Query: 385 LLVEDSNLQAPTWSPSGRSLI 405
            L     +++  +S  G  L+
Sbjct: 321 DLPGTGEVRSILFSADGTVLL 341


>gi|255715487|ref|XP_002554025.1| KLTH0E12606p [Lachancea thermotolerans]
 gi|238935407|emb|CAR23588.1| KLTH0E12606p [Lachancea thermotolerans]
          Length = 755

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 67/194 (34%), Gaps = 15/194 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   ++   FSP+ + +  A+ D    +R++  DT       +  N    I    F
Sbjct: 477 TLVGHSGTVYSTAFSPDNRYLLSASED--KTVRLWSTDTYTSLVSYKGHNHP--IWDVAF 532

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREG 324
           S  G     +   D+   ++S D       R+      ++   S+ P+ +  VF    + 
Sbjct: 533 SPLGHYFA-TASHDQTARLWSCDHIY--PLRIFAGHLNDVDTVSFHPNGTY-VFTGSSDK 588

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             +++    +  D  R+     A       SP G  ++     G    I V    G+ +R
Sbjct: 589 TCRMW--DMSTGDSVRLFLGHTAPVTATAVSPDGRWLSTGSEDG---IINVWDI-GTGKR 642

Query: 385 LLVEDSNLQAPTWS 398
           L     + +   +S
Sbjct: 643 LKQMRGHGKNAVYS 656



 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 62/192 (32%), Gaps = 14/192 (7%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSP 311
           +      + +  FS + +  L S  +D+ + ++S D  ++       N    ++  ++SP
Sbjct: 478 LVGHSGTVYSTAFSPDNRYLL-SASEDKTVRLWSTDTYTSLVSYKGHNHPIWDV--AFSP 534

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                   S     +   +   +     RI            + P G  + FT  S +  
Sbjct: 535 LGHYFATASH---DQTARLWSCDHIYPLRIFAGHLNDVDTVSFHPNGTYV-FTGSSDKTC 590

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +  M    S    L   + + A   SP GR L        D    ++ I   G  + L 
Sbjct: 591 RMWDMSTGDSVRLFLGHTAPVTATAVSPDGRWL---STGSEDGIINVWDI---GTGKRLK 644

Query: 432 NTPAYASDPQWV 443
               +  +  + 
Sbjct: 645 QMRGHGKNAVYS 656


>gi|212637057|ref|YP_002313582.1| peptidase S9, prolyl oligopeptidase active site region:peptidase
           S9B, dipeptidylpeptidase IV [Shewanella piezotolerans
           WP3]
 gi|212558541|gb|ACJ30995.1| Peptidase S9, prolyl oligopeptidase active site region:Peptidase
           S9B, dipeptidylpeptidase IV [Shewanella piezotolerans
           WP3]
          Length = 746

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 65/194 (33%), Gaps = 55/194 (28%)

Query: 261 LAPR---FSSNGKRALI-SVQKDE--AMDIYSVDLQSNATE------RLTNTLFIN---- 304
            +PR    S +GKR    + +KD+    D++ +D+ +          +LT     +    
Sbjct: 49  TSPRGLKLSPDGKRVTYLAGRKDDQHFYDLWQMDVATGKQSLLLDADKLTIGELSDEEKA 108

Query: 305 ------------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                       +   ++ DS  ++  +      QLY      +  K + +  E    D 
Sbjct: 109 RRERQRIYGQGIMEYFWADDSQAMLIPA----SGQLYYFSVKTNQVKLL-KTGEGFATDA 163

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQA 394
             SP+G+ ++F +       + V+     +   L  D                    +  
Sbjct: 164 RLSPKGNYVSFVREQ----NLYVLDLKTEKVTALTTDGGGAIKNAMAEFVAQEEMGRMTG 219

Query: 395 PTWSPSGRSLIFSR 408
             WSP   ++ ++R
Sbjct: 220 YWWSPDESAIAYTR 233



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 92/299 (30%), Gaps = 87/299 (29%)

Query: 220 SPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------------- 264
           SP+ ++V Y     DD+    ++ MD    +    +   +  I                 
Sbjct: 57  SPDGKRVTYLAGRKDDQHFYDLWQMDVATGKQSLLLDADKLTIGELSDEEKARRERQRIY 116

Query: 265 --------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                   ++ + +  LI         +Y   +++N  + L         A  SP  + +
Sbjct: 117 GQGIMEYFWADDSQAMLIPASG----QLYYFSVKTNQVKLLKTGEGFATDARLSPKGNYV 172

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQGDL 360
            F  +    + LYV+         ++ D   +  + +                WSP    
Sbjct: 173 SFVRE----QNLYVLDLKTEKVTALTTDGGGAIKNAMAEFVAQEEMGRMTGYWWSPDESA 228

Query: 361 IAFTKFSGE------------------------------KFAIGVMKKDGSQE--RLLVE 388
           IA+T+                                    A+GV+    S+     L +
Sbjct: 229 IAYTRIDESAVELVTRNEIYADGIKLTEQRYPYAGKNNVTIALGVVSLSDSKVAWVDLGK 288

Query: 389 DSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLN--GRNETLINTPAYASDPQWV 443
           D+++  P   W P  + L +  +        L  ++++   RN+ L+   + A    WV
Sbjct: 289 DTDIYLPRVKWLPDSKQLSYQWQSRDQQSLDLRVVNIDDIKRNKDLVQERSEA----WV 343



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 62/469 (13%), Positives = 134/469 (28%), Gaps = 109/469 (23%)

Query: 14  KINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSI----AFTKFVSIDELGGKVSEVV 69
           K  + LLL        +   A   V        P++I    A          G K+S   
Sbjct: 3   KNWMSLLLATFPMMMASPAIAQSSV--TKGGDKPLTIERMYASPALAGTSPRGLKLSP-- 58

Query: 70  SKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWN----------SLGAQVLVTGRVIKE 119
                                    D    +  W            L A  L  G +  E
Sbjct: 59  -------------DGKRVTYLAGRKDDQHFYDLWQMDVATGKQSLLLDADKLTIGELSDE 105

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKF--FSSPASWRKIAHTISDDIYQS---------ITG 168
            K R            R++I G+    +      + +    S  +Y           +  
Sbjct: 106 EKARRE----------RQRIYGQGIMEYFWADDSQAMLIPASGQLYYFSVKTNQVKLLKT 155

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDR----------DGANI------RYLTPSRDQ 212
            +G      L    + VS + + +L V+D           DG          ++      
Sbjct: 156 GEGFATDARLSPKGNYVSFVREQNLYVLDLKTEKVTALTTDGGGAIKNAMAEFVAQEEMG 215

Query: 213 ILFEPRFSPNQQKVAYATYDDEDIL-----RVYLMDTRIDRAPKRIGNFRSMILA----- 262
            +    +SP++  +AY   D+  +       +Y    ++           ++ +A     
Sbjct: 216 RMTGYWWSPDESAIAYTRIDESAVELVTRNEIYADGIKLTEQRYPYAGKNNVTIALGVVS 275

Query: 263 -------------------PR--FSSNGKRALISVQKDE--AMDIYSVDLQSNATER-LT 298
                              PR  +  + K+     Q  +  ++D+  V++      + L 
Sbjct: 276 LSDSKVAWVDLGKDTDIYLPRVKWLPDSKQLSYQWQSRDQQSLDLRVVNIDDIKRNKDLV 335

Query: 299 NTLF-----INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                    +N    +       ++ S+R+G   LY++  +G   ++++Q   A      
Sbjct: 336 QERSEAWVNLNDDLHFLKKQKSFIWASERDGFNHLYLIGLDGKVIRQLTQGDWAVDAVEY 395

Query: 354 WSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
              +   + FT    +  +  +  +   G +   +   S + +  ++ +
Sbjct: 396 IDEKAGEVYFTGRKTKVTERQLYRVAITGGKVEPISSRSGMHSTVFADN 444



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 38/281 (13%), Positives = 85/281 (30%), Gaps = 74/281 (26%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++ + Q             ++Y    + ++  K +          R S  G       ++
Sbjct: 125 WADDSQ-----AMLIPASGQLYYFSVKTNQ-VKLLKTGEGFATDARLSPKGNYVSFVREQ 178

Query: 279 DEAMDIYSVDLQSNATERLTNT-----------------LFINISASYSPDSSQIVFESD 321
           +    +Y +DL++     LT                   +       +SPD S I +   
Sbjct: 179 N----LYVLDLKTEKVTALTTDGGGAIKNAMAEFVAQEEMGRMTGYWWSPDESAIAYTRI 234

Query: 322 REG------KEQLY------------------------VMQSNGSDQKRISQDKEASYFD 351
            E       + ++Y                        V+  + S    +   K+   + 
Sbjct: 235 DESAVELVTRNEIYADGIKLTEQRYPYAGKNNVTIALGVVSLSDSKVAWVDLGKDTDIYL 294

Query: 352 PV--WSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPSG---- 401
           P   W P    +++       +   + V+  D    +   +    ++  W          
Sbjct: 295 PRVKWLPDSKQLSYQWQSRDQQSLDLRVVNID--DIKRNKDLVQERSEAWVNLNDDLHFL 352

Query: 402 ---RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
              +S I++ ++DG   + LY I L+G+    +    +A D
Sbjct: 353 KKQKSFIWASERDG--FNHLYLIGLDGKVIRQLTQGDWAVD 391


>gi|67526937|ref|XP_661530.1| hypothetical protein AN3926.2 [Aspergillus nidulans FGSC A4]
 gi|40740045|gb|EAA59235.1| hypothetical protein AN3926.2 [Aspergillus nidulans FGSC A4]
 gi|259481500|tpe|CBF75078.1| TPA: WD repeat protein (AFU_orthologue; AFUA_6G08380) [Aspergillus
           nidulans FGSC A4]
          Length = 522

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/211 (16%), Positives = 72/211 (34%), Gaps = 20/211 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM- 259
              ++L     + +   RFSP+   +A  +   +  ++V+   T      K I  F    
Sbjct: 166 YRQKFLLRGHLRGVSAVRFSPDASMIA--SGGADGAVKVWAASTG-----KLIYTFEGHL 218

Query: 260 --ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             I    +S +G     S   D+ + +++V                  + ++SP  + +V
Sbjct: 219 AGISTISWSPDGATIA-SGSDDKTIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLV 277

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S     E +++     +   +                 G LIA     G    + +  
Sbjct: 278 SGSY---DEAVFLWDVRSARVMKSLPAHSDPVSGIDVVWDGTLIASCATDG---LVRIWD 331

Query: 378 KDGSQ-ERLLVEDSNLQAPT--WSPSGRSLI 405
               Q  R LV + N    +  +SP+G+ ++
Sbjct: 332 TSTGQCLRTLVHEDNPPVSSVKFSPNGKYVL 362



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 67/197 (34%), Gaps = 17/197 (8%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G    R    +  + SG    ++ V       + Y        +    +SP+   +A  
Sbjct: 177 RGVSAVRFSPDASMIASGGADGAVKVWAASTGKLIYTFEGHLAGISTISWSPDGATIASG 236

Query: 230 TYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           + D      + L +    +  P       + + A  FS  G   + S   DEA+ ++ V 
Sbjct: 237 SDDK----TIRLWNVLTGKAHPTPFIGHHNYVYAIAFSPKGNMLV-SGSYDEAVFLWDV- 290

Query: 289 LQSNATERLTNT----LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             +   + L         I++   +  D + I   +  +G  +++   + G   + +  +
Sbjct: 291 RSARVMKSLPAHSDPVSGIDV--VW--DGTLIASCAT-DGLVRIWDTST-GQCLRTLVHE 344

Query: 345 KEASYFDPVWSPQGDLI 361
                    +SP G  +
Sbjct: 345 DNPPVSSVKFSPNGKYV 361


>gi|325183586|emb|CCA18046.1| transcriptional repressor TUP1like protein putative [Albugo
           laibachii Nc14]
          Length = 657

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 78/213 (36%), Gaps = 19/213 (8%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +I    S++    +TG + +  S + +VS+ +VSG     + + D   +    +  S   
Sbjct: 431 RIWDIASNEEGPPLTGHESEIYS-LDYVSDLIVSGSGDRKIRLWDARTSQCTKIFGSESG 489

Query: 213 ILFEP----RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              +       SP+ + +A A+ D      V + DT   +   R+      + +  FS +
Sbjct: 490 GPSDGVTSVALSPDGRLLAAASLDK----VVRIWDTETSQLLDRLEGHSDSVYSIAFSPD 545

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLT----NTLFINISASYSPDSSQIVFES-DRE 323
           GK  +IS   D  + ++ V  Q   T R            +S +Y+PD   ++  S DR 
Sbjct: 546 GKN-VISGSLDRNIMLWDVCAQGRTTTRPRMLFQGHKDFVLSVAYTPDGRWLMSGSKDRS 604

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
               +       S           S      SP
Sbjct: 605 ----VVFWDPRSSRSVLTLTGYRNSVISVASSP 633



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 81/235 (34%), Gaps = 25/235 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+  K+            + + D   +     +    S I +  + S+    ++S   
Sbjct: 414 FSPDCTKLVAGM----PHNTIRIWDIASNEEGPPLTGHESEIYSLDYVSD---LIVSGSG 466

Query: 279 DEAMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFESDREGKEQLYVMQS 333
           D  + ++  D +++   ++  +          S + SPD   +   S     + + +  +
Sbjct: 467 DRKIRLW--DARTSQCTKIFGSESGGPSDGVTSVALSPDGRLLAAASL---DKVVRIWDT 521

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSN 391
             S      +    S +   +SP G  +           + +    +  ++ R+L +   
Sbjct: 522 ETSQLLDRLEGHSDSVYSIAFSPDGKNVISGSLDRNIMLWDVCAQGRTTTRPRMLFQGHK 581

Query: 392 LQ--APTWSPSGRSLIFSRKKDG----DTGSKLYSIDLNGRNETLINTPAYASDP 440
               +  ++P GR L+   K       D  S    + L G   ++I+  +  + P
Sbjct: 582 DFVLSVAYTPDGRWLMSGSKDRSVVFWDPRSSRSVLTLTGYRNSVISVASSPTSP 636


>gi|271964653|ref|YP_003338849.1| peptidase S9, prolyl oligopeptidase active site region
           [Streptosporangium roseum DSM 43021]
 gi|270507828|gb|ACZ86106.1| peptidase S9, prolyl oligopeptidase active site region
           [Streptosporangium roseum DSM 43021]
          Length = 662

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 74/213 (34%), Gaps = 20/213 (9%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR------VYLMDT 244
             L  +  DG  +R +  ++   L  PR SP+   +A+  +D   +        V  +D 
Sbjct: 178 RELVAVPLDGGPVRLIVRAQ-HFLTNPRLSPDGTHIAWIGWDHPAMPWDGTELCVAPLDA 236

Query: 245 RIDRAPKRI--GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                P R+  G     ++   +  +G    ++   D   +++ V L  +    L     
Sbjct: 237 LGSAGPYRVVAGGPEESVIQAEWRDDGALYALT-DPDGWWNLHLVPLDGSPARNLAPLQE 295

Query: 303 INISASY-------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
               A +       S    +IV       + +L V+     +   +  D   +Y++P  S
Sbjct: 296 DCGDAVWRLGNTWFSLAGDRIVLVHGTPDRRRLGVLDPATGEMTDL--DAPPTYWNPTVS 353

Query: 356 PQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLV 387
             GDL+A    S    F +  +        +L 
Sbjct: 354 TGGDLVAGVAASPYTPFEVVTVDLRTGAHAVLS 386


>gi|115385819|ref|XP_001209456.1| hypothetical protein ATEG_10154 [Aspergillus terreus NIH2624]
 gi|114187903|gb|EAU29603.1| hypothetical protein ATEG_10154 [Aspergillus terreus NIH2624]
          Length = 839

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 79/257 (30%), Gaps = 20/257 (7%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                E  D +  I   ++S + G    ++   +     +  L       + +   S + 
Sbjct: 50  PKTIDEGNDGHLGIGATNDSFIMGAEDGTVWQYEVGSGRMEKLLVRCALPVRDIAVSRDG 109

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +  A A+    D L V +++       K +           F  NG+   +S   D  + 
Sbjct: 110 EWAAVAS----DELTVKIVNIEDMTKVKYLREQTKGSKHITFDPNGRFIAVSCT-DGIVY 164

Query: 284 IYSVDLQ--------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           IYS+D               RL           + PD +   F S  E    + +     
Sbjct: 165 IYSLDTDEPQLVQKLDGVIRRLEPEDEATSRIVWHPDGT--AFAS-AEATRDISIYSVGE 221

Query: 336 -SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              +K  S           WSP G L+     +G    I + +    +     + +N+  
Sbjct: 222 WKKEKTFSNGHNGDITAMSWSPNGALLM---TAGSDGQILLWETKTQKVLKQYDFANVIN 278

Query: 395 PTWSPSGRSLIFSRKKD 411
             W PS  S  F+    
Sbjct: 279 LAWHPSHNSASFTTSDG 295



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 73/238 (30%), Gaps = 27/238 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++PN + +   T      +R+Y +    +      GN   + +          + I   
Sbjct: 22  TYTPNGRYI--VTGGSNSAIRIYTVGQDGEPKTIDEGNDGHLGIGAT-----NDSFIMGA 74

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D  +  Y V       + L          + S D       SD     +L V   N  D
Sbjct: 75  EDGTVWQYEV-GSGRMEKLLVRCALPVRDIAVSRDGEWAAVASD-----ELTVKIVNIED 128

Query: 338 QKRISQDKEASYFDPVWS--PQGDLIAFTKFSGEKFAIG--------VMKKDGSQERLLV 387
             ++   +E +      +  P G  IA +   G  +           V K DG   RL  
Sbjct: 129 MTKVKYLREQTKGSKHITFDPNGRFIAVSCTDGIVYIYSLDTDEPQLVQKLDGVIRRLEP 188

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           ED       W P G    F+   +      +YS+    + +T  N      +   W  
Sbjct: 189 EDEATSRIVWHPDGT--AFAS-AEATRDISIYSVGEWKKEKTFSNGHNGDITAMSWSP 243


>gi|118360614|ref|XP_001013539.1| hypothetical protein TTHERM_00741670 [Tetrahymena thermophila]
 gi|89295306|gb|EAR93294.1| hypothetical protein TTHERM_00741670 [Tetrahymena thermophila SB210]
          Length = 2402

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 105/318 (33%), Gaps = 46/318 (14%)

Query: 115  RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
             V      +            +WDV    Q++               H+I+    + I  
Sbjct: 1857 SVTFSADSKYLATASFNSLCIIWDVDKGFQLL---------------HSINAHGQKKIFS 1901

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                F+ +++    +  S      +  ++  G  +          +F+  FSPN + +A 
Sbjct: 1902 VAFSFDGKLI----ATGSEDQTCKVWSIEA-GFKLIKTLQGHIFQIFQVAFSPNGKYLAT 1956

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + D    +        +    K   NF   + +  FS+N K    S   D    I++V+
Sbjct: 1957 CSQDSTFKIWNVEKGYELIDTIKAHSNF---VYSVVFSANSKYLA-SSSNDATCKIWNVE 2012

Query: 289  LQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKE 346
                    +     I   SA++S D+ Q++  S   G     +     G +  ++ +   
Sbjct: 2013 -NGFQLVNVIQKHTICIYSAAFSQDAKQLITGS---GDTTFKIWNLEKGFELIKMDEKHT 2068

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQAPTWSPSGRS 403
                   +SP G L+A        F I     +   E   ++     +++   +S  G+ 
Sbjct: 2069 YVISSVAFSPDGKLLA--TADNNFFKIW--STERGFELINKIEAYKLSIKYLAFSQDGKY 2124

Query: 404  LIFSRKKDGDTGSKLYSI 421
            L+           K++S+
Sbjct: 2125 LV---TYSNSQTIKIWSV 2139


>gi|307354140|ref|YP_003895191.1| hypothetical protein Mpet_2003 [Methanoplanus petrolearius DSM
           11571]
 gi|307157373|gb|ADN36753.1| hypothetical protein Mpet_2003 [Methanoplanus petrolearius DSM
           11571]
          Length = 465

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 82/273 (30%), Gaps = 28/273 (10%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +    G F+     +  S    +  +   +   D +         +   + P    +   
Sbjct: 83  VADPSGKFS-----LDFSGDRYVWSDQRGIFLYDESEGEITFLYSNNSQYSPVI--DGDI 135

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMD 283
           + +    D+    + + +       +  G        P  S  G       +   +  M+
Sbjct: 136 IVWVEKIDDKRSILRIYNISTGEYSEISGGMFDSFDYPAIS--GDWIAFIKTDVYEGTME 193

Query: 284 IYSVDLQSNATERLTNTLFINISASYSP---DSSQIVFES-DREGKEQLYVMQSNGSDQK 339
           +   +L         +     +   Y P   D + +V+   + +G    ++   +     
Sbjct: 194 LCLHNLNEQNGY--MSFTGAEVPVVYQPPSIDGNHVVWTGMNDDGYYNTFLYDIDTGKSD 251

Query: 340 RISQDKEASYFDPVWSPQGDLIA------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            I    +++   P  S  G+ IA      +         + V   D    R +  DS  +
Sbjct: 252 -IVYPSDSAQLCPDIS--GNYIAWLDLGSYPSNLPWGGHLFVQDLDSGVTREISPDSKQE 308

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            P  S  G  +++   +  D    L+S   +GR
Sbjct: 309 FPKVS--GDYVVWLNARGDDHEIYLHSFLDDGR 339


>gi|207722241|ref|YP_002252677.1| periplasmic component of the tol transport system tolb-related
           protein [Ralstonia solanacearum MolK2]
 gi|206587417|emb|CAQ17999.1| periplasmic component of the tol transport system tolb-related
           protein [Ralstonia solanacearum MolK2]
          Length = 475

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 87/270 (32%), Gaps = 23/270 (8%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYA 229
              +  L     V  G   + L + D     +  ++ S   I       FSP+ + +A+ 
Sbjct: 41  AGLTGKLAYHSYVSYGDGTSQLFIYDFAARTLTQVSQSAWGIQDPMNAVFSPDGKWLAFM 100

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSV 287
              + +   V+L        P  + N         P+FS++GK        D      S 
Sbjct: 101 GITN-NAWNVFLWQVGSSSQPINMTNSTGQTRNEDPKFSADGKSLFFKQSGDVMQATLSY 159

Query: 288 DLQS---NATERLTNT-LFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +   +TNT   I  S    +PD+S + F +       LY        +    
Sbjct: 160 TSTGPIFTSVVDITNTAPAIENSMPFATPDASAVYFATGTGAGMGLYKETIATHAKVAFD 219

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVE---DSNLQAPT 396
                  + P+    G  + + ++         I      G     L     +SN   PT
Sbjct: 220 TPAGLQTYYPIVRADGT-VFYARWKDATSQADQIYTKVNPGDTPNQLSINDCNSNNSDPT 278

Query: 397 WSP-SGR-SLIFSRKKDGDTGSKLYSIDLN 424
             P +G   + FS    G  G +LY  D++
Sbjct: 279 --PVNGTNYVFFSSTTAG--GYQLYLGDVS 304



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + S  +G  QL++         ++SQ         + V+SP G  +AF   +   + + +
Sbjct: 52  YVSYGDGTSQLFIYDFAARTLTQVSQSAWGIQDPMNAVFSPDGKWLAFMGITNNAWNVFL 111

Query: 376 MKKDGS----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +   S            +  + P +S  G+SL F  K+ GD      S    G
Sbjct: 112 WQVGSSSQPINMTNSTGQTRNEDPKFSADGKSLFF--KQSGDVMQATLSYTSTG 163



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 9/88 (10%), Positives = 28/88 (31%), Gaps = 6/88 (6%)

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +  +      + +          + + +    +     +SP G+ L F    +      L
Sbjct: 52  YVSYGDGTSQLFIYDFAARTLTQVSQSAWGIQDPMNAVFSPDGKWLAFMGITNNAWNVFL 111

Query: 419 YSIDLNGRNETLINTPAYAS--DPQWVG 444
           + +  + +   + N+       DP++  
Sbjct: 112 WQVGSSSQPINMTNSTGQTRNEDPKFSA 139


>gi|194755767|ref|XP_001960154.1| GF11669 [Drosophila ananassae]
 gi|190621452|gb|EDV36976.1| GF11669 [Drosophila ananassae]
          Length = 362

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 74/216 (34%), Gaps = 17/216 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +++  P     +   +FSP+ + +  A+ D      +   D       + +      
Sbjct: 62  GYALKFSMPGHASCVTSVKFSPDGEYLTSASAD----WFLKQWDVETASLIQSMTGHNHG 117

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVF 318
           I    ++  G+    +   D+ + ++  D++S   +  L        S  ++P  + +  
Sbjct: 118 INDVTWAPVGRTLA-TCSDDKTVKLW--DVRSGRCQMTLEGHGGFTFSCRFNPQGNLLAS 174

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E + +         +             ++  G L   + F G    + +   
Sbjct: 175 TSF---DETVRLWDIRTGRTLKTVPAHLDPISSVDFNRDGSLFVTSSFDG---LVRIWDA 228

Query: 379 DG-SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKD 411
                 + L++D N  +    ++P+G+ ++ S   +
Sbjct: 229 TTCQVLKTLIDDDNTPVGHVKFAPNGKYILTSTMNN 264


>gi|300176338|emb|CBK23649.2| unnamed protein product [Blastocystis hominis]
          Length = 487

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 51/128 (39%), Gaps = 10/128 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                Q++ +  FSP+ + +A A++D +    V + D    +    +      +    +S
Sbjct: 370 LTGHQQLVNQMAFSPDGRFIASASFDKK----VKVWDGATGKLLNTLHGHVGAVYQIAWS 425

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            + +    S  +D  + I+   L   A   L+  L    +  +SP  +++       GK+
Sbjct: 426 PDSRFIA-SASRDSTVKIWK-PLGKKALYTLSGHLDEVYAIDWSPFGTKVA----SGGKD 479

Query: 327 QLYVMQSN 334
           +L  + S 
Sbjct: 480 RLVKIWSA 487



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 48/156 (30%), Gaps = 13/156 (8%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKE 326
           NG   L S   D  + ++     S     RLT    +    ++SPD   I   S     +
Sbjct: 341 NGPERLCSCSDDFTLFLWE-PASSKQPVARLTGHQQLVNQMAFSPDGRFIASASF---DK 396

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           ++ V                 + +   WSP    IA          + + K  G +    
Sbjct: 397 KVKVWDGATGKLLNTLHGHVGAVYQIAWSPDSRFIASASRDST---VKIWKPLGKKALYT 453

Query: 387 VEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
           +     +     WSP G  +        D   K++S
Sbjct: 454 LSGHLDEVYAIDWSPFGTKVA---SGGKDRLVKIWS 486



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P   + +    FSP+              + V   D       K     R+ +L   +S 
Sbjct: 118 PGHTEAILHVSFSPDG----LVLGTGGGDMTVRFWDVNTCTPIKTCMGHRNHVLCTAWSP 173

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSP-----DSSQIVFESD 321
           NGK   +    D++ ++      +     RL+       S S+ P        ++   S 
Sbjct: 174 NGK---LYASGDKSGEVIVWRAGTGEMVCRLSGHRQWVTSLSWEPLHRNAKCERLA-SSS 229

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           R+G   + V       ++ +      S     W   G+ + +T        + 
Sbjct: 230 RDGT--VAVWNVRTRRREAVIAGHSDSIECCKW--GGEGLLYTASRDRTVRVW 278



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 14/134 (10%)

Query: 234 EDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            D   ++L +    + P  R+   + ++    FS +G+    S   D+ + ++  D  + 
Sbjct: 350 SDDFTLFLWEPASSKQPVARLTGHQQLVNQMAFSPDGRFIA-SASFDKKVKVW--DGATG 406

Query: 293 ATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
              +L NTL  ++ A    ++SPDS    F +       + + +  G             
Sbjct: 407 ---KLLNTLHGHVGAVYQIAWSPDSR---FIASASRDSTVKIWKPLGKKALYTLSGHLDE 460

Query: 349 YFDPVWSPQGDLIA 362
            +   WSP G  +A
Sbjct: 461 VYAIDWSPFGTKVA 474



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/309 (11%), Positives = 85/309 (27%), Gaps = 68/309 (22%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +G    ++   D +              +    +SPN +  A      +    V +   
Sbjct: 137 GTGGGDMTVRFWDVNTCTPIKTCMGHRNHVLCTAWSPNGKLYA----SGDKSGEVIVWRA 192

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRA----LISVQKDEAMDIYSVDLQSNATERLTNT 300
                  R+   R  + +  +    + A    L S  +D  + ++  ++++   E +   
Sbjct: 193 GTGEMVCRLSGHRQWVTSLSWEPLHRNAKCERLASSSRDGTVAVW--NVRTRRREAVIAG 250

Query: 301 LFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              +I    +      +++ + R+   +++ ++   +   R              S    
Sbjct: 251 HSDSIECCKWG--GEGLLYTASRDRTVRVWALEGEAAKLVRTLVGHAHRVNALALSTD-- 306

Query: 360 LIAFTKFSG-------------------------------------EKFAIGVMKKDGSQ 382
             A  +  G                                     + F + + +   S+
Sbjct: 307 --AVLRSGGFGWETREFATEEAMFQAAKERYEEARKNGPERLCSCSDDFTLFLWEPASSK 364

Query: 383 E---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT----PA 435
           +   RL      +    +SP GR +        D   K++    +G    L+NT      
Sbjct: 365 QPVARLTGHQQLVNQMAFSPDGRFIA---SASFDKKVKVW----DGATGKLLNTLHGHVG 417

Query: 436 YASDPQWVG 444
                 W  
Sbjct: 418 AVYQIAWSP 426



 Score = 36.5 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 198 RDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            DGA  + L         +++  +SP+ + +A A+ D      V +      +A   +  
Sbjct: 401 WDGATGKLLNTLHGHVGAVYQIAWSPDSRFIASASRDS----TVKIWKPLGKKALYTLSG 456

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
               + A  +S  G +   S  KD  + I+S 
Sbjct: 457 HLDEVYAIDWSPFGTKVA-SGGKDRLVKIWSA 487


>gi|315506668|ref|YP_004085555.1| hypothetical protein ML5_5952 [Micromonospora sp. L5]
 gi|315413287|gb|ADU11404.1| hypothetical protein ML5_5952 [Micromonospora sp. L5]
          Length = 861

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 69/221 (31%), Gaps = 25/221 (11%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISV 276
           P+    A AT  D  +L       R  R  +R      + +  +     + +G+ A +++
Sbjct: 380 PDGCCTAAATVGDWSLLGSRDGSLRWWRPGERPAIRWKSPKGAVSGLAVAPDGRSAAVTL 439

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  +  + V  +     R           S+SPD   +     R+G   + V      
Sbjct: 440 ANDGLVRTFDVTDRQVVPRRALPVPGAAGPISFSPDGRLLA-AGTRDG---VAVFDLGSG 495

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +  + +          WSP G+ I +      + +    +       ++          
Sbjct: 496 LRIGLLRGSVGEVRHLAWSPAGERI-WALAGERRVSSWHWRAGT----VITN-------- 542

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            +P GR   F           L ++D  GR   L  + A  
Sbjct: 543 -AP-GRK--FVALSGPPGADWLAAVDGTGRISILDTSAARV 579


>gi|87309971|ref|ZP_01092104.1| putative WD-repeat containing protein [Blastopirellula marina DSM
           3645]
 gi|87287217|gb|EAQ79118.1| putative WD-repeat containing protein [Blastopirellula marina DSM
           3645]
          Length = 1131

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 65/198 (32%), Gaps = 20/198 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S +   VA A         V + D    R  + I      I +  FS + +       
Sbjct: 186 AYSADGTLVAGAGGQVGVSGEVRIWDAATGRLKQSIRGHHDAIYSVAFSPDAQVLA---T 242

Query: 278 KDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNG 335
                D+   DLQS      LT         ++  DS  +   S DR     + +     
Sbjct: 243 GSYDKDVIVWDLQSGLPLNTLTGHNDAIYDLAFRNDSKVLATCSADRT----VKLWDITT 298

Query: 336 SDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSN 391
            +  R+    EA+       +SP G+ +A          + +     +G+  RLL     
Sbjct: 299 GE--RLETFGEATDETNAVCFSPAGNRVAAAGADNRIRVWQVSKSAAEGTN-RLLFTKFA 355

Query: 392 LQAP----TWSPSGRSLI 405
             AP      SP G+ L+
Sbjct: 356 HDAPILDLALSPDGKLLV 373



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 70/189 (37%), Gaps = 15/189 (7%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V+ +     +   + + D     ++         ++   FSP+ Q +A  +YD      V
Sbjct: 194 VAGAGGQVGVSGEVRIWDAATGRLKQSIRGHHDAIYSVAFSPDAQVLATGSYDK----DV 249

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-T 298
            + D +       +      I    F ++ K    +   D  + ++  D+ +   ERL T
Sbjct: 250 IVWDLQSGLPLNTLTGHNDAIYDLAFRNDSKVLA-TCSADRTVKLW--DITTG--ERLET 304

Query: 299 NTLFIN-ISAS-YSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPV 353
                +  +A  +SP  +++      +R    Q+    + G+++   +    +A   D  
Sbjct: 305 FGEATDETNAVCFSPAGNRVAAAGADNRIRVWQVSKSAAEGTNRLLFTKFAHDAPILDLA 364

Query: 354 WSPQGDLIA 362
            SP G L+ 
Sbjct: 365 LSPDGKLLV 373


>gi|294654831|ref|XP_002770035.1| DEHA2A13420p [Debaryomyces hansenii CBS767]
 gi|199429183|emb|CAR65411.1| DEHA2A13420p [Debaryomyces hansenii]
          Length = 607

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 69/198 (34%), Gaps = 25/198 (12%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPD 312
            N    I +  FS +GK    +  +D+ + I+  DL++    ++      +  S  + PD
Sbjct: 335 ANGDLYIRSVCFSPDGKLLA-TGAEDKLIRIW--DLETKRIIKILRGHEQDIYSLDFFPD 391

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +++V  S   G   + +     S    ++   E        SP G LI           
Sbjct: 392 GNRLVSGS---GDRTVRIWDLRSSQCS-LTLSIEDGVTTVAVSPDGQLITAGSLDRT--- 444

Query: 373 IGVMKKDGSQERLLVEDSN---------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           + V           ++  N         + +  +S +G+ +        D   KL+  +L
Sbjct: 445 VRVWDSTTGFLVERLDSGNESGNGHEDSVYSVAFSTNGKQIA---SGSLDRTVKLW--NL 499

Query: 424 NGRNETLINTPAYASDPQ 441
            G+ +   N    AS  +
Sbjct: 500 EGKQDPQSNVSNNASTGK 517



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 59/185 (31%), Gaps = 22/185 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + + D +   I  +    +Q ++   F P+  ++   + D      V + D R
Sbjct: 355 TGAEDKLIRIWDLETKRIIKILRGHEQDIYSLDFFPDGNRLVSGSGDR----TVRIWDLR 410

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERL--TNTLF 302
             +    +      +     S +G + + +   D  + ++  D  +    ERL   N   
Sbjct: 411 SSQCSLTLSIEDG-VTTVAVSPDG-QLITAGSLDRTVRVW--DSTTGFLVERLDSGNESG 466

Query: 303 INISAS-----YSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                S     +S +  QI   S DR     + +    G    + S     +      S 
Sbjct: 467 NGHEDSVYSVAFSTNGKQIASGSLDRT----VKLWNLEGKQDPQ-SNVSNNASTGKKSSC 521

Query: 357 QGDLI 361
               I
Sbjct: 522 DVTYI 526


>gi|168698779|ref|ZP_02731056.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 808

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 65/234 (27%), Gaps = 29/234 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F P+   +A AT          ++DT   +   R+        A   S++G R      
Sbjct: 321 AFFPSGDILAVAT-----GRGTLVLDTSRGKELARLEGHADTCGAVAVSADGTRIA---T 372

Query: 278 KDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D    +   D ++  +             A  SPD  +++        E +        
Sbjct: 373 ADGFGLVRLWDAKTFRSLHEAPGHRAPVTHAELSPDGKRLL---TWAEDETVRFWDLATG 429

Query: 337 DQKRISQDKEA------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            + R                 P ++P G  I F+                  E  L  D 
Sbjct: 430 QELRAFAGAPGLGGTRSRDSRPTFAPDGTAILFSTKDRLVGR----DLQTGLEIPLPGDL 485

Query: 391 NLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
               P    ++P GRS++     D      +   D  G  +    +P     P 
Sbjct: 486 ANSKPRNVVFAPDGRSVLTWADAD----PSVAVYDWPGGKKRFDVSPDGPVRPA 535



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 66/243 (27%), Gaps = 30/243 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-YATYDDEDILRVYLMDT 244
            G  +  +     D    +      D       ++P+ + +A +   D E    V  +  
Sbjct: 234 RGAREAVVTAWPVDSGKPKRPVRVPDGARLM--YAPDARSLAVFTAGDREWGFDVIPIVE 291

Query: 245 RIDRAPKRIGNFRSMILAP----------RFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                P+     R  +  P           F  +G    ++        +     +    
Sbjct: 292 PYKSPPRTRQRLRWPLPHPETEAHDGGGFAFFPSGDILAVAT---GRGTLVLDTSRGKEL 348

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            RL        + + S D ++I      +G   + +  +        +    A       
Sbjct: 349 ARLEGHADTCGAVAVSADGTRIA---TADGFGLVRLWDAKTFRSLHEAPGHRAPVTHAEL 405

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--------SNLQAPTWSPSGRSLIF 406
           SP G  +           +        QE              S    PT++P G +++F
Sbjct: 406 SPDGKRLLTWAEDET---VRFWDLATGQELRAFAGAPGLGGTRSRDSRPTFAPDGTAILF 462

Query: 407 SRK 409
           S K
Sbjct: 463 STK 465



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 7/107 (6%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P F+P+   + ++T D   ++   L        P  + N +   +   F+ +G+  L  
Sbjct: 450 RPTFAPDGTAILFSTKD--RLVGRDLQTGLEIPLPGDLANSKPRNV--VFAPDGRSVLTW 505

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              D    +   D          +       A +SPD +  VF   R
Sbjct: 506 ADAD--PSVAVYDWPGGKKRFDVSPDGPVRPAHFSPDGA-AVFADVR 549


>gi|67970130|dbj|BAE01409.1| unnamed protein product [Macaca fascicularis]
          Length = 422

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 68/198 (34%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  DD     V + +      P      +  + A  +       L    
Sbjct: 34  AWHPHTNKFAVALLDD----SVRVYNASSTIVPSLKHRLQRNVAALAWKPLSASVLAVAC 89

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 90  QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIR 146

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  I  T  S   F +   +     ER     
Sbjct: 147 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKILATTPS-AVFRVWEAQMWT-CERWPTLS 204

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 205 GRCQTGCWSPDGNRLLFT 222


>gi|330340159|gb|AEC11520.1| actin-interacting protein 1 [Physcomitrella patens]
          Length = 609

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 76/241 (31%), Gaps = 41/241 (17%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   RFSPN + +A  + D    +RV+  +       + I      +    +
Sbjct: 52  VYGEHGYAVTVARFSPNGEWIA--SGDVSGTVRVWARNEDRTLRFE-IRALSGSVDDLDW 108

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G+R ++      +  + +    S +               +   S +++  + +  +
Sbjct: 109 SPDGQRIVVCGDGKGSTFVKAFLWDSGS-----------TVGEFDGHSKRVLSCAFKPTR 157

Query: 326 E-------QLYVMQSNGSDQKRIS---QDKEASYFDPVWSPQGDLIAFTKFSGEKF---- 371
                   + +++        R     +          +SP G            F    
Sbjct: 158 PFRIVTCGEDFLVNFYEGPPFRFKASNRGHSNFVNCIRFSPDGSKFLSVGSDKNGFLFNG 217

Query: 372 ----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                IG +  +           ++ A +WSP+G+ ++       D  +K++ I   G  
Sbjct: 218 KTGEKIGELSSENG------HSGSIYAASWSPNGKQVL---TVSADKTAKIWDISEEGSG 268

Query: 428 E 428
           +
Sbjct: 269 K 269



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 6/120 (5%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +A+ SP   + V    + GK  +Y ++ +   Q  + +          +SP G +IA  
Sbjct: 453 TAAALSPHGEEAV-VGGQNGKLYVYSVKGDTLTQGVVLEKHRGEISSVRYSPDGTMIASG 511

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             + E      +  +   + +L   + + A  WSP    +  +          +Y  D+ 
Sbjct: 512 DLNREAVVWDRITWEVKVKNMLYHTARVNAVAWSPDSSKVATTSVDGC-----IYVYDVT 566



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 41/136 (30%), Gaps = 27/136 (19%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSP 311
           +      A   S +G+ A++     +   +Y   ++ +   +   L        S  YSP
Sbjct: 447 DVDYSATAAALSPHGEEAVV---GGQNGKLYVYSVKGDTLTQGVVLEKHRGEISSVRYSP 503

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQD--------KEASYFDPVWSPQGDLIAF 363
           D + I      +   +  V         RI+ +          A      WSP    +A 
Sbjct: 504 DGTMIA---SGDLNREAVVWD-------RITWEVKVKNMLYHTARVNAVAWSPDSSKVAT 553

Query: 364 TKFSGEKFAIGVMKKD 379
           T   G    I V    
Sbjct: 554 TSVDG---CIYVYDVT 566



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 38/112 (33%), Gaps = 7/112 (6%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D        SP+ ++      + +  L VY +          +   R  I + R+S +G 
Sbjct: 449 DYSATAAALSPHGEEAVVGGQNGK--LYVYSVKGDTLTQGVVLEKHRGEISSVRYSPDGT 506

Query: 271 RALISVQKDEAMDIYSVDLQS--NATERLTNTLFINISASYSPDSSQIVFES 320
                   D   +    D  +     + +        + ++SPDSS++   S
Sbjct: 507 MIA---SGDLNREAVVWDRITWEVKVKNMLYHTARVNAVAWSPDSSKVATTS 555


>gi|283781296|ref|YP_003372051.1| cytochrome C [Pirellula staleyi DSM 6068]
 gi|283439749|gb|ADB18191.1| Planctomycete cytochrome C [Pirellula staleyi DSM 6068]
          Length = 1073

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 72/235 (30%), Gaps = 21/235 (8%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ--KVAYATYDDEDILRVYLM 242
            V+G   N L + + + A    +       +    FS       VA         + V   
Sbjct: 779  VTGGDDNLLHLWNGETAGAGEVIEGHASPIAAVAFSDTGLLVSVAKQPTAMIHEIGVDWK 838

Query: 243  DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV---QKDEAMDIYSVDLQSNATERLT- 298
              R+  +P         ++A  FS +GK          +   + I+  +  +     LT 
Sbjct: 839  LERMIGSPDSPEKLVDRVIAVAFSPDGKLIATGGGEPSRSGELKIW--NADTGDLV-LTL 895

Query: 299  --NTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWS 355
                     S  +SPD   +       G ++   V + NG    R  +          W 
Sbjct: 896  KDAHSDTIYSIEFSPDGQHVASC----GADRFVKVFEVNGGKFVRSFEGHTHHVLGVTWR 951

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSR 408
              G ++     SG    + V       +   ++    +  +  ++  G +++ S 
Sbjct: 952  ADGRMLV---SSGADNVVKVWDTRTGDQVRTIQGFGKEVTSVHFAGEGDAVLVSS 1003



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 54/164 (32%), Gaps = 36/164 (21%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ +++A           V +           I    S   +   SS+ K A +   
Sbjct: 226 TFSPDGRRLA-----SGGFRTVKIWQKPGITKKLDIAGLESAARSMAISSDRKLAAV--- 277

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +E   I  +DL +    + L        + ++S D++++V                   
Sbjct: 278 GEEGGKIKVIDLATGQPIKTLEGHAGPVTAVAFSSDATKLV------------------- 318

Query: 337 DQKRISQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKD 379
                     A      W+   G LIA  +     F+IGV+ +D
Sbjct: 319 -------SGAADKKLHTWNLADGSLIAAIETPSPIFSIGVVLED 355



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 61/190 (32%), Gaps = 40/190 (21%)

Query: 273 LISVQKDEAM---------DIYSVDLQSNATERLTN----TLFINISA-----------S 308
            ++V +D             IY V  +     RLT+       I               +
Sbjct: 168 AVAVTRDGMYGAAARANQVSIYHVPGR-RELSRLTDPALLERGIYTQPGVADLDLVQSLT 226

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD  ++       G   + + Q  G  +K      E++      S     +A     G
Sbjct: 227 FSPDGRRLA----SGGFRTVKIWQKPGITKKLDIAGLESAARSMAISSD-RKLAAVGEEG 281

Query: 369 EKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NG 425
            K  I V+     Q    +E     + A  +S     L+      G    KL++ +L +G
Sbjct: 282 GK--IKVIDLATGQPIKTLEGHAGPVTAVAFSSDATKLV-----SGAADKKLHTWNLADG 334

Query: 426 RNETLINTPA 435
                I TP+
Sbjct: 335 SLIAAIETPS 344


>gi|284029697|ref|YP_003379628.1| WD40 domain-containing protein beta Propeller [Kribbella flavida
           DSM 17836]
 gi|283808990|gb|ADB30829.1| WD40 domain protein beta Propeller [Kribbella flavida DSM 17836]
          Length = 319

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 90/246 (36%), Gaps = 50/246 (20%)

Query: 211 DQILFEPRFSPNQQKVAYAT----YDDEDILRVYL-MDTRIDRAPKRIGNFRS--MILAP 263
           DQ  +   F+P+ +   ++     +       +Y    TR   +   +  F      + P
Sbjct: 55  DQEEYRITFTPDGRTAYFSRAASFFPVSRQATIYQSQRTRTGWSTPVVAPFSGTYSDIDP 114

Query: 264 RFSSNGKRALISVQKD------EAMDIYSVDLQ----------SNATERLTNTLFINISA 307
             + +GK    S  +       + +D++ VD +          + A  +    +  + S 
Sbjct: 115 FVTPDGKHLYFSSIRPVGGTARDDIDVWVVDRRPDGSWSAPRHTGAVNQ--GGVAADGSP 172

Query: 308 ------SYSPDSSQIVFESDREGKEQLYVMQS-----NGSDQKRISQDKE----ASYFDP 352
                 S  PD +  V  S+R+G +  + +       +G+    ++   +       F+P
Sbjct: 173 IDELYPSIGPDGAMYV-GSNRDGGQGGWDVWRAAPRRDGTFGPAVNLGPKLNTAGWEFNP 231

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKD-------GSQERL--LVEDSNLQAPTWSPSGRS 403
           V SP G  + F++ +  +   G ++         G+   +  +  +++    ++SP GR 
Sbjct: 232 VVSPDGRYLVFSRIAAFQAPWGELQASARTAHGWGAPHPIEAVNTEADEYHASFSPDGRR 291

Query: 404 LIFSRK 409
             F R 
Sbjct: 292 FYFVRN 297



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 33/129 (25%), Gaps = 15/129 (11%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIG---NFRSMI 260
                    P   P+      +  D      D+ R              +G   N     
Sbjct: 169 DGSPIDELYPSIGPDGAMYVGSNRDGGQGGWDVWRAAPRRDGTFGPAVNLGPKLNTAGWE 228

Query: 261 LAPRFSSNGKRALISV-----QKDEAMDIYSVDLQS-NATERL--TNTLFINISASYSPD 312
             P  S +G+  + S           +   +       A   +   NT      AS+SPD
Sbjct: 229 FNPVVSPDGRYLVFSRIAAFQAPWGELQASARTAHGWGAPHPIEAVNTEADEYHASFSPD 288

Query: 313 SSQIVFESD 321
             +  F  +
Sbjct: 289 GRRFYFVRN 297


>gi|194870404|ref|XP_001972644.1| GG13777 [Drosophila erecta]
 gi|190654427|gb|EDV51670.1| GG13777 [Drosophila erecta]
          Length = 390

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 80/256 (31%), Gaps = 55/256 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  +  D A  R+ T     I    RF P+  ++A ++ D      V L +        R
Sbjct: 1   MQGLFSDPALERHFTGHSGGITQL-RFGPDGNQIATSSTDS----TVILWNLSQAARCIR 55

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-------------------SVDLQSNA 293
             +  + +    +S  G     S   D  + I+                   SVD  S  
Sbjct: 56  FASHSAPVNGVAWSPKGNLVA-SAGHDRTVKIWEPKLRGVSGEFLAHGKAVRSVDFDSTG 114

Query: 294 TERLTNTLF----------------------INISASYSPDSSQIVFESDREGKEQLYVM 331
              LT +                           SA +SP+   +   SD    + + + 
Sbjct: 115 HLMLTASDDKSAKIWRVARRQFVTSFAQQNNWVRSAKFSPNGKLVATASD---DKSVRIY 171

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VED 389
             +  +  R   ++  +     W P G+++A          I +    GSQ   L  V  
Sbjct: 172 DVDSGECVRTFTEERGAPRQLAWHPWGNMLAVALGCN---RIKIFDVAGSQLLQLYVVHS 228

Query: 390 SNLQAPTWSPSGRSLI 405
           + +    + PSG  L+
Sbjct: 229 APVNDVAFHPSGHFLL 244



 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 43/128 (33%), Gaps = 7/128 (5%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
               T          + PD +QI   S  +    L+ +       +       A      
Sbjct: 11  ERHFTGHSGGITQLRFGPDGNQIA-TSSTDSTVILWNLSQAARCIR--FASHSAPVNGVA 67

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           WSP+G+L+A +        I   K  G     L     +++  +  +G  ++ +     D
Sbjct: 68  WSPKGNLVA-SAGHDRTVKIWEPKLRGVSGEFLAHGKAVRSVDFDSTGHLMLTASD---D 123

Query: 414 TGSKLYSI 421
             +K++ +
Sbjct: 124 KSAKIWRV 131


>gi|148681181|gb|EDL13128.1| WD repeat domain 26 [Mus musculus]
          Length = 515

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 72/209 (34%), Gaps = 26/209 (12%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D    + ++ +D       K +          
Sbjct: 201 QQILTEHCNEVWFCKFSNDGTKLATGSKDT--TVIIWQVDPVDTHLLKLLKTLEGHAYGV 258

Query: 264 ---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVF 318
               +S +    +     D+  +++  ++Q+       +    +   S +++PD  + V 
Sbjct: 259 SYIAWSPDDSYLVACG-PDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVT 317

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFAI 373
              R    Q Y    +G+    +    E      +W    G  +  +    +  G  F  
Sbjct: 318 GGQRG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGKTVLASDTHQRVRGYNFE- 369

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                D +   ++ ED  + + T S +GR
Sbjct: 370 -----DLTDRNIVQEDHPIMSFTISKNGR 393



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/113 (12%), Positives = 38/113 (33%), Gaps = 11/113 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLT-----PSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +G    ++ +   D  +   L            +    +SP+   +       +D   ++
Sbjct: 225 TGSKDTTVIIWQVDPVDTHLLKLLKTLEGHAYGVSYIAWSPDDSYLVAC--GPDDCSELW 282

Query: 241 LMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           L + +      ++  +    + +  ++ +GKR +      +    Y  DL  N
Sbjct: 283 LWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFV---TGGQRGQFYQCDLDGN 332


>gi|145512004|ref|XP_001441924.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409185|emb|CAK74527.1| unnamed protein product [Paramecium tetraurelia]
          Length = 4104

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 73/192 (38%), Gaps = 16/192 (8%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FS N + +A     +     V L D    +  +++   +  ILA  FS + K    S  K
Sbjct: 1988 FSSNGKLIA----SNGKGNLVSLWDVESYKVIQQLDGHQDTILAVTFSPDSKTLA-SASK 2042

Query: 279  DEAMDIYSVDLQSNATERLTNTLFIN----ISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D+ + ++  D+Q+   ++L   +  +     +  ++ D  +I    D  G   +   +S 
Sbjct: 2043 DKTIKLW--DIQNPEIKQLIFNIDYHDYQVTAIKFTSDGKKIA-SVDSSGIFVICNFESI 2099

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQ 393
                  I    +       ++    LIA          I ++      ER+L+     +Q
Sbjct: 2100 SEKPDDIIFQCQQEILVYTFTSDDQLIALGLDDSS---IKLIHPKRRAERILIGHTGKIQ 2156

Query: 394  APTWSPSGRSLI 405
            A  +S +G  L+
Sbjct: 2157 ALAFSKAGNRLV 2168


>gi|66818915|ref|XP_643117.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
 gi|75014069|sp|Q86HX1|HIRA_DICDI RecName: Full=Protein HIRA
 gi|60471202|gb|EAL69165.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
          Length = 1114

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 21/169 (12%), Positives = 57/169 (33%), Gaps = 15/169 (8%)

Query: 218 RFSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           ++S + + +A  +       +   +   +    T        +    S I    +S + K
Sbjct: 75  KWSKDGKYLASGSDDKLCMIWGLSNNNSLLKNTTENWVCVATLRGHASDISEVSWSPDNK 134

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE----GKE 326
               +   D+++ I+  + +     +L          ++ P    +  +S+ +     + 
Sbjct: 135 YIA-TCSFDKSIIIWETN-KFQMVSKLEEHKGFVKGLTWDPLGRYLASQSEDKSLIIWRT 192

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             +V+++  ++         + +  P W+P G  I  T         GV
Sbjct: 193 SDWVVETIVTEP--FKHSGNSFFLRPSWTPDGQFIVATHGINNATHTGV 239



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 82/229 (35%), Gaps = 34/229 (14%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRI----- 253
            ++++     I +     P+  +VA    D +     +  + L++   D    ++     
Sbjct: 6   PQWVSHGGLSI-YSIDIHPDGTRVATGGGDAKIKIWSMAPISLLEAEEDAGIPKLLCSIE 64

Query: 254 -GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN----------TLF 302
             +F S+  + ++S +GK    S   D+   I+ +   ++  +  T              
Sbjct: 65  NAHFHSVN-SVKWSKDGKYLA-SGSDDKLCMIWGLSNNNSLLKNTTENWVCVATLRGHAS 122

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                S+SPD+  I   S     + + + ++N        ++ +       W P G  +A
Sbjct: 123 DISEVSWSPDNKYIATCSF---DKSIIIWETNKFQMVSKLEEHKGFVKGLTWDPLGRYLA 179

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLI 405
               S +K  I     D   E ++ E            P+W+P G+ ++
Sbjct: 180 --SQSEDKSLIIWRTSDWVVETIVTEPFKHSGNSFFLRPSWTPDGQFIV 226


>gi|260460450|ref|ZP_05808701.1| WD-40 repeat protein [Mesorhizobium opportunistum WSM2075]
 gi|259033555|gb|EEW34815.1| WD-40 repeat protein [Mesorhizobium opportunistum WSM2075]
          Length = 1008

 Score = 53.9 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 83/247 (33%), Gaps = 21/247 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATY------DDEDILRVYLMDTRIDRAPKRIGNFRS 258
           YL    D  +F    SP+ + +A   Y      D      V L D    +    +     
Sbjct: 88  YLGNGSDGKIFAVAVSPDGKTIAAGGYFGVGLGDKPPYGDVRLFDFATGKMKAVLKAADY 147

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQI 316
                 FS +GK    +   D  + ++ +D  +  T  ++L    +     +++   +++
Sbjct: 148 ATYDLAFSPDGKTLA-AGGGDGMVYLWGLDDATGWTLDKKLDADSWHIDKLAFAAGGTRL 206

Query: 317 VFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +   G   + +      ++  +     Q ++ S      SP G L A     G +  
Sbjct: 207 AAATTDNG---IRLWDVAKGEEIALPAEAEQLRDVSVQALAASPDGSLFATGSKDG-QVQ 262

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK-DGDTGSKLYSIDLNGRNETLI 431
           +           +  +D  + + T++   R +     +      S +++ID     E L+
Sbjct: 263 LWRAADGTLARTIPKQDFLIGSLTFAKGSRLVASCGYRCADKHRSTVWNID---TGEKLL 319

Query: 432 NTPAYAS 438
           +   +  
Sbjct: 320 DYSGHDG 326



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 73/223 (32%), Gaps = 36/223 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+      +  A+    + +  + +D        ++ +         F+ +G+  + S  
Sbjct: 15  RWLAVAGALVSASIARAEDVPDFHLDLDTGGHSAQVTDL-------AFTPDGEDIV-SAS 66

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS------ASYSPDSSQIV----FESDREGKE- 326
            D+ + I+  D QS  T R       N S       + SPD   I     F      K  
Sbjct: 67  DDKTIRIW--DWQSGVTLRTIRGYLGNGSDGKIFAVAVSPDGKTIAAGGYFGVGLGDKPP 124

Query: 327 --QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +        K + +  + + +D  +SP G  +A     G  +  G+    G    
Sbjct: 125 YGDVRLFDFATGKMKAVLKAADYATYDLAFSPDGKTLAAGGGDGMVYLWGLDDATG---- 180

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRK------KDGDTGSKLYSI 421
               D  L A +W      L F+           D G +L+ +
Sbjct: 181 -WTLDKKLDADSWHID--KLAFAAGGTRLAAATTDNGIRLWDV 220


>gi|327352628|gb|EGE81485.1| chromosome segregation protein [Ajellomyces dermatitidis ATCC
           18188]
          Length = 849

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 84/250 (33%), Gaps = 25/250 (10%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   +   F+  +    + K  L     D   +R   P RD  L     S +   VA A+
Sbjct: 62  GIVATNDSFIMGAEDGTVWKYELATGQMDKLLVRCALPVRDLSL-----SKDGDWVAVAS 116

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               D L V +++       K + +    +    F  +G+   +S   D  + IYS+D  
Sbjct: 117 ----DELVVKIVNIHDMTIVKYLRDQSKGVKHVNFDPSGRFIAVSGS-DGIIYIYSIDSP 171

Query: 291 --------SNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
                        RL T+    +  A + PD+    F +    ++   V   + + Q   
Sbjct: 172 QPELVKKIDGIIGRLETDHEATSR-AVWHPDAR--AFAAVEPTRDIAIVSTRDWTKQNVF 228

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                A      WSP G L+A    +G    I + +          +  N+    W P  
Sbjct: 229 PAGHNADITALAWSPNGALLA---SAGADRQILLWETKSQSILRRYDIPNVINLAWHPVD 285

Query: 402 RSLIFSRKKD 411
            +L F+    
Sbjct: 286 NTLSFTTSDG 295


>gi|309791018|ref|ZP_07685555.1| G-protein beta WD-40 repeats containing protein, putative
           [Oscillochloris trichoides DG6]
 gi|308226933|gb|EFO80624.1| G-protein beta WD-40 repeats containing protein, putative
           [Oscillochloris trichoides DG6]
          Length = 666

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 65/178 (36%), Gaps = 16/178 (8%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L     D +P    +    I+A   SS+G   +     DE   I      +    ++ + 
Sbjct: 374 LRTWNPDGSPADTLSDAGAIVALALSSDGSLIV---SGDEGGQISIRQPDATLITQIQSP 430

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                + + SPD+S +   S  +G  +L+ +     + +      E S F   +SP G  
Sbjct: 431 GGSLRTLALSPDASLLASGS-ADGTLRLWALP--SGELQSELPGHEGSIFSLAFSPDGQR 487

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL-------VEDSNLQAPTWSPSGRSLIFSRKKD 411
           +A     G    + + +  G+ ER+        +  + L    ++P G+ +  +    
Sbjct: 488 VATVGDDGT---LRLWRISGAAERVTPVLQSDGISATALYHVAFAPDGQQIAVASSAG 542



 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 67/193 (34%), Gaps = 19/193 (9%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            +++     SL   + DG+    L+ +   +      S +   +   + D+   + +   
Sbjct: 364 RILTAARDGSLRTWNPDGSPADTLSDAGAIVAL--ALSSDGSLI--VSGDEGGQISIRQP 419

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D  +     +I +    +     S +      S   D  + ++++         L     
Sbjct: 420 DATL---ITQIQSPGGSLRTLALSPDASLLA-SGSADGTLRLWALP-SGELQSELPGHEG 474

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD------KEASYFDPVWSP 356
              S ++SPD  ++    D +G  +L+ +       +R++           + +   ++P
Sbjct: 475 SIFSLAFSPDGQRVATVGD-DGTLRLWRIS---GAAERVTPVLQSDGISATALYHVAFAP 530

Query: 357 QGDLIAFTKFSGE 369
            G  IA    +GE
Sbjct: 531 DGQQIAVASSAGE 543



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 61/391 (15%), Positives = 120/391 (30%), Gaps = 80/391 (20%)

Query: 113 TGRVIKEGKDRLRVEFR------LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
              +      RL    +      LWDV +R  +   +     A                 
Sbjct: 167 IAAIAISPDGRLLAAAQADQIVSLWDVAERSNLTTLRLPLDEAGM--------------- 211

Query: 167 TGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
               G F S         + +G    ++ V          +     +++ +  F+PN Q+
Sbjct: 212 -IVPGSFTSVAFSPDNQFLAAGDDGGNVGVWAMSDLVALQVLSVGVRVVSDVAFAPNSQQ 270

Query: 226 VAYATYDDEDILR-VYLMDTRIDRAPKRIG-NFRSMILAPR----FSSNGKRALISVQKD 279
           +A A+         +++ D         +G    +  LAP     F  +G   L+ +   
Sbjct: 271 IAAASEGWRSEPGAIWIWDVATGEEKHWLGIADATRFLAPAQRLAFRPDGAEVLMGLADG 330

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA-----------------SYSPDSS-------- 314
             +     D  + A E + +T  I   A                 +++PD S        
Sbjct: 331 SLLRWRLADTSTLAQELVGHTAAITALAMAQDGRILTAARDGSLRTWNPDGSPADTLSDA 390

Query: 315 ----QIVFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
                +   SD       +   Q+ + Q + +   +I Q    S      SP   L+A +
Sbjct: 391 GAIVALALSSDGSLIVSGDEGGQISIRQPDATLITQI-QSPGGSLRTLALSPDASLLA-S 448

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL- 423
             +     +  +     Q  L   + ++ +  +SP G+ +        D   +L+ I   
Sbjct: 449 GSADGTLRLWALPSGELQSELPGHEGSIFSLAFSPDGQRVA---TVGDDGTLRLWRISGA 505

Query: 424 ----------NGRNETLINTPAYASDPQWVG 444
                     +G + T +   A+A D Q + 
Sbjct: 506 AERVTPVLQSDGISATALYHVAFAPDGQQIA 536



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 71/201 (35%), Gaps = 25/201 (12%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +A +         V L  T   R   RI    S I A   S +G+    + Q D+
Sbjct: 133 PDGSTLAVSV-----AAVVDLYATEDGRFLGRIPGLGSPIAAIAISPDGRLLA-AAQADQ 186

Query: 281 AMDIYSVDLQSNATE-RLTNT------LFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            + ++ V  +SN T  RL              S ++SPD+  +    D  G   ++ M  
Sbjct: 187 IVSLWDVAERSNLTTLRLPLDEAGMIVPGSFTSVAFSPDNQFLA-AGDDGGNVGVWAMS- 244

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERL---LVE 388
                 ++         D  ++P    IA     +  E  AI +      +E+    + +
Sbjct: 245 -DLVALQVLSVGVRVVSDVAFAPNSQQIAAASEGWRSEPGAIWIWDVATGEEKHWLGIAD 303

Query: 389 DSNLQAP----TWSPSGRSLI 405
            +   AP     + P G  ++
Sbjct: 304 ATRFLAPAQRLAFRPDGAEVL 324



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 52/133 (39%), Gaps = 3/133 (2%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDT 244
           SG    +L +       ++   P  +  +F   FSP+ Q+VA    D    + R+     
Sbjct: 448 SGSADGTLRLWALPSGELQSELPGHEGSIFSLAFSPDGQRVATVGDDGTLRLWRISGAAE 507

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           R+    +  G   + +    F+ +G++  ++    E     S DL     ER +      
Sbjct: 508 RVTPVLQSDGISATALYHVAFAPDGQQIAVASSAGEISLWRSADL--TQIERRSIEPDRA 565

Query: 305 ISASYSPDSSQIV 317
           +  S++P ++ + 
Sbjct: 566 LQLSFTPQNNLLA 578


>gi|156932665|ref|YP_001436581.1| hypothetical protein ESA_00449 [Cronobacter sakazakii ATCC BAA-894]
 gi|156530919|gb|ABU75745.1| hypothetical protein ESA_00449 [Cronobacter sakazakii ATCC BAA-894]
          Length = 392

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/283 (15%), Positives = 89/283 (31%), Gaps = 31/283 (10%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPS----RDQILFEPRFSPNQQKVAYATYDDEDILR 238
             +   ++  + +    GA +  LTP          ++  F  +   + +A   D     
Sbjct: 3   KGMRVKLQYQISIDPDTGAEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGH-WN 61

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL- 297
            YL+D     A +              S +              ++    L      R+ 
Sbjct: 62  YYLLDLENAEAVQLTEGAGDNTFGGFLSPDDNYLYYVKNDRVLREVNLTTLAERDVYRVP 121

Query: 298 ---------------TNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSN-GSDQKR 340
                          T  + I I+ S Y P S   +F           ++  +  +   +
Sbjct: 122 EAWVGYGTWVANSDCTKLVGIEIAKSDYVPLSDWKIFHDFFHKGPHCRLLHIDLQTGASQ 181

Query: 341 ISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF---AIGVMKKDGSQERLL---VEDSNLQ 393
              +++     P++ P   + +AF            + ++ +DGS  R +    E  +  
Sbjct: 182 TIHEEKIWLGHPIYRPFDDNTVAFCHEGPHDLIDARMWMVNEDGSNVRKVKEHAEGESCT 241

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYS-IDLNGRNETLINTPA 435
              W P G +L++     G  G  +Y  +   G NE ++  PA
Sbjct: 242 HEFWVPDGSALVYVSYLKGQQGRTVYRYLPERGVNEEIMPIPA 284



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 64/227 (28%), Gaps = 39/227 (17%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEA---M 282
            +  +  +      L       A + I   +  +  P +   +        +        
Sbjct: 157 IFHDFFHKGPHCRLLHIDLQTGASQTIHEEKIWLGHPIYRPFDDNTVAFCHEGPHDLIDA 216

Query: 283 DIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQ 338
            ++ V+   +   ++             + PD S +V+ S  +G++   +Y         
Sbjct: 217 RMWMVNEDGSNVRKVKEHAEGESCTHEFWVPDGSALVYVSYLKGQQGRTVYRYLPERGVN 276

Query: 339 KRIS-----------QDKEASYFDPVWSP-----------QGDLIAFTKFSGEKFAIGVM 376
           + I             D      D   +P             D   +      K    V 
Sbjct: 277 EEIMPIPACSHLMSNFDGTLLVGDGSGTPVDVKDTGGYTIDNDPYLYVFDVNNKSYYRVA 336

Query: 377 KKDGS-----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           + D S       R +        P+++P G +++FS  KDG     L
Sbjct: 337 RHDTSWETFAGSRQVTHP----HPSFTPDGNTILFSTDKDGKPAVYL 379



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 72/209 (34%), Gaps = 25/209 (11%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFSPNQQKVAYAT 230
            F+   +         +I   + +++ DG+N+R +    +        + P+   + Y +
Sbjct: 197 PFDDNTVAFCHEGPHDLIDARMWMVNEDGSNVRKVKEHAEGESCTHEFWVPDGSALVYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           Y      R VY          + +       L   F  +G   +     D +     VD+
Sbjct: 257 YLKGQQGRTVYRYLPERGVNEEIMPIPACSHLMSNF--DGTLLV----GDGSGTP--VDV 308

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +       T    I+            VF+ +    +  Y +  + +  +  +  ++ ++
Sbjct: 309 KD------TGGYTIDNDPYL------YVFDVN---NKSYYRVARHDTSWETFAGSRQVTH 353

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             P ++P G+ I F+     K A+ + K 
Sbjct: 354 PHPSFTPDGNTILFSTDKDGKPAVYLAKL 382


>gi|196004508|ref|XP_002112121.1| hypothetical protein TRIADDRAFT_55834 [Trichoplax adhaerens]
 gi|190586020|gb|EDV26088.1| hypothetical protein TRIADDRAFT_55834 [Trichoplax adhaerens]
          Length = 334

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 86/240 (35%), Gaps = 15/240 (6%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           +G    ++CV D + G+ I+ L      +     FS +    A ++ D      +    T
Sbjct: 32  TGADDATVCVWDCQSGSLIKTLEKHTGPVRCC-CFSLDNNYFATSSTDR---TIILWKAT 87

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFI 303
                    G+ RS+ +   FS +    L S   D    ++ ++   +    +LT     
Sbjct: 88  TCQDIITLKGHHRSVEVC-CFSPD-STLLCSGSWDNCAILWKINENKSQLYTKLTGHSSC 145

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SPD  Q+      +   +++ +   G    ++      +    ++S   + +A 
Sbjct: 146 VQSCAFSPDGDQLA-TGSWDHTIRIWKL-YCGIRCIQVLTGHSGNVHTVIYSS-KNQLAS 202

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +      +  + K      L+  D  +QA  +SP    L  +     D   +++ +  
Sbjct: 203 GSWDKTVI-LWDVDKGYPLHVLVGHDGWIQACAFSPDATFLASAAD---DESVRVWDVST 258



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 5/121 (4%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            Q +TG  G+ ++ I      + SG    ++ + D D     ++    D  +    FSP+
Sbjct: 179 IQVLTGHSGNVHTVIYSSKNQLASGSWDKTVILWDVDKGYPLHVLVGHDGWIQACAFSPD 238

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              +A A  D+     V + D    +    +      +    F  +G     S    E  
Sbjct: 239 ATFLASAADDE----SVRVWDVSTGKCTSILQGHVDEVHTCAFLPSG-HIFTSGSVGEWF 293

Query: 283 D 283
            
Sbjct: 294 K 294


>gi|296810244|ref|XP_002845460.1| minichromosome loss protein 1 [Arthroderma otae CBS 113480]
 gi|238842848|gb|EEQ32510.1| minichromosome loss protein 1 [Arthroderma otae CBS 113480]
          Length = 850

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 78/214 (36%), Gaps = 25/214 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S +++ VA A+    D L V ++        K + +    +    F  +G+   +S  
Sbjct: 104 AISKDEEWVAVAS----DELTVKIVSVNDITEVKYLRDQTKGVKHVTFDPSGRFVTVS-C 158

Query: 278 KDEAMDIYS--------VDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQL 328
            D  + IYS        +       +RL T+      SA + PD +   F +    ++  
Sbjct: 159 ADGIIYIYSFTETEPTLLHKLDGVIQRLETDHEAT-SSAVWHPDGT--AFAAVEATRDIT 215

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +   + + QK+ S           WSP G L+A    +G    I + +    +     +
Sbjct: 216 VISSRDWTKQKKFSGGHNGDITCLAWSPNGALLA---SAGADRKILLWETRTQRVIKSYD 272

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             N+    W P+  ++ F+         +L+  D
Sbjct: 273 IPNVINFRWHPTQNAVAFTTSDG-----ELFIYD 301


>gi|47085759|ref|NP_998214.1| POC1 centriolar protein homolog A [Danio rerio]
 gi|82241397|sp|Q7ZVF0|POC1A_DANRE RecName: Full=POC1 centriolar protein homolog A; AltName: Full=WD
           repeat domain 51A
 gi|28277823|gb|AAH45888.1| WD repeat domain 51A [Danio rerio]
          Length = 416

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 71/189 (37%), Gaps = 16/189 (8%)

Query: 248 RAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             P    NF+     I +  FS +GK+   S   D ++ ++++  QS    R T      
Sbjct: 6   DDPTLERNFKGHRDAITSLDFSPSGKQIA-SGSVDASVMVWNMKPQSR-AYRFTGHKDAV 63

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               +SP +  +   S R+   +L+V    G     + +    S     +S  G  +  T
Sbjct: 64  TCVQFSPSAHLLA-SSSRDKTVRLWVPSVKGESV--LFRAHTGSVRSVCFSADGQSLL-T 119

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               +   +  + +      L   ++ ++   +SP G+ ++       D   KL+    +
Sbjct: 120 ASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQLMVSVSD---DRTVKLW----D 172

Query: 425 GRNETLINT 433
             +  LI+T
Sbjct: 173 ASSRQLIHT 181



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 79/256 (30%), Gaps = 26/256 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V    G ++  L  +    +    FS + Q +  A+ D      + L      +   
Sbjct: 85  RLWVPSVKGESV--LFRAHTGSVRSVCFSADGQSLLTASDDQ----SIKLWSVHRQKIIC 138

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT----LFINISA 307
            +    + +   RFS +G + ++SV  D  + ++  D  S    +L +T       +   
Sbjct: 139 TLREHNNWVRCARFSPDG-QLMVSVSDDRTVKLW--DASS---RQLIHTFCEPGGYSSYV 192

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + P S+ I   S       + V         +  Q   A+     + P G+ +      
Sbjct: 193 DFHPSSTCIATASS---DNTVRVWDIRTHTLLQHYQVHSAAVNALSFHPSGNHLLTASSD 249

Query: 368 GEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG- 425
                + +   +G     L     +    ++S SG           D    ++  + +  
Sbjct: 250 STLKILDL--LEGRLLYTLHGHQGSASCVSFSRSGDQFA---SAGSDQQVMVWRTNFDSV 304

Query: 426 RNETLINTPAYASDPQ 441
               ++        P 
Sbjct: 305 DYSRVLQQKRDHRTPS 320


>gi|239907233|ref|YP_002953974.1| hypothetical protein DMR_25970 [Desulfovibrio magneticus RS-1]
 gi|239797099|dbj|BAH76088.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 967

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 74/211 (35%), Gaps = 19/211 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +    +  L+    SP+ + V    ++ Y  +    VY+ D    +  +R+    S++  
Sbjct: 93  IGHEYEGRLYSVAMSPDGRYVFCGGWSGYGWDKAHSVYVFDRESGQLVRRLTGLPSVVNH 152

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              S +G      + +D        DL     +R  +    +  A++  D    +  +  
Sbjct: 153 LAISRDGAYLAAVLGEDGLRVWRLSDLALVGQDR--DYKGESYGAAF--DGKGHLATACY 208

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           +G  +LY +   G      +Q +  +  F   +SP G  +A     G      V   D  
Sbjct: 209 DGAVRLYRVADTGLTLLAKTQTQGGARPFSLAFSPDGSQLAV----GFTDTPAVTVLDAE 264

Query: 382 QERLL-------VEDSNLQAPTWSPSGRSLI 405
              LL       V++ NL    ++  G  L 
Sbjct: 265 TLGLLGAPNLAGVDNGNLATVAFAADGSLLA 295



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 62/444 (13%), Positives = 115/444 (25%), Gaps = 122/444 (27%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            +  G     G D+      ++D +  + +  ++    P+    +A +       ++ GE
Sbjct: 112 YVFCGGWSGYGWDKAH-SVYVFDRESGQLV--RRLTGLPSVVNHLAISRDGAYLAAVLGE 168

Query: 170 KGDFNSRILFVSESVVSGIIKNS-----------LCVMDRDGANIRYLTPSRDQILFEP- 217
            G    R+  ++        K             L     DGA   Y        L    
Sbjct: 169 DGLRVWRLSDLALVGQDRDYKGESYGAAFDGKGHLATACYDGAVRLYRVADTGLTLLAKT 228

Query: 218 -----------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                       FSP+  ++A    D   +  +      +  AP   G     +    F+
Sbjct: 229 QTQGGARPFSLAFSPDGSQLAVGFTDTPAVTVLDAETLGLLGAPNLAGVDNGNLATVAFA 288

Query: 267 SNGKRAL-----------ISVQKDEAMDIYSVDLQSNA-----TERLTNT--LFINISAS 308
           ++G               I   K      Y  DL +          L +    +  ++  
Sbjct: 289 ADGSLLAAGRWVTDRGCPIRSFKPSDYVQYR-DLDTGKSAVVALCPLPDGGVAYGTVAPR 347

Query: 309 YS---PDSSQ---------------IVFESDR---------EGKEQLYVMQSNGSDQKRI 341
           +    PD S                  F  DR          G++ +Y     G D + I
Sbjct: 348 WGVLRPDGSFGMTRSPAIQDYRSSVRAFYLDRTGETVGYAVGGRKGVYRFALPGRDLRHI 407

Query: 342 --------------------------SQDKEA---------SYFDPVWSPQGDLIAFTKF 366
                                     +              + F    +P    +     
Sbjct: 408 DAVTPDMAAPRTQAAGLTVAGWEGGRTPTLNGQPLKMKDFETSFSLAIAPDNRRLIL--- 464

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSK 417
            G  + +     DG+          + A   S  GR ++         + R +DG     
Sbjct: 465 -GTSWNVRAYGADGAPLWQTPAPDTVWAVNVSGDGRMVVAAMGDGSIRWYRLEDGRELLS 523

Query: 418 LYSIDLNGRNETL-INTPAYASDP 440
            Y  + +G+   L   T  Y + P
Sbjct: 524 -YFPNADGKRWVLWTPTGYYDASP 546


>gi|254514807|ref|ZP_05126868.1| peptidase S9, prolyl oligopeptidase active site region [gamma
           proteobacterium NOR5-3]
 gi|219677050|gb|EED33415.1| peptidase S9, prolyl oligopeptidase active site region [gamma
           proteobacterium NOR5-3]
          Length = 663

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 94/270 (34%), Gaps = 32/270 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED----ILRVYLMDTRIDRAPKRIGN 255
           GA+   +TP          F  ++ ++     D       +  +  ++   +     + +
Sbjct: 126 GASPEPITPDAALRYAGCSFDSSRNRLLCIREDHRGLEEPVNTLVALNPAEEGEGDVLFS 185

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------NATERLTNTLFINIS--- 306
               + APR S +G R   +      M   S  L S       A   LT     +     
Sbjct: 186 GTDFVSAPRLSPDGTRIAFTSWMHPNMPWDSTTLHSARFDELGAFVNLTTHNPASRESVI 245

Query: 307 -ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWS--------- 355
              +  D++ I   SDR+   + Y++   G+    I +  +      P W+         
Sbjct: 246 DPQWREDNTLIA-ISDRDNWWKPYII--AGTAFTAIETGLENVEIGGPDWTIGGRYYWLL 302

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P+G ++   +    +  I +   D    + +++   +   +      +L F+     D  
Sbjct: 303 PEGQMLLVARQGSVEQLIAL---DSQGRQRVLDTGAVSYGSLVVDKDTLYFTAGFA-DRP 358

Query: 416 SKLYSIDLNGRNETLINTPAYAS-DPQWVG 444
           S L S +L+G  + +I   + A+ D  W+ 
Sbjct: 359 SALVSANLDGAIQDVIRRSSDAALDAMWIP 388


>gi|169641924|gb|AAI60602.1| Si:ch211-153j24.6 protein [Danio rerio]
          Length = 530

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 76/206 (36%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT   +  + +      +   
Sbjct: 214 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVEPDTHQLKLLRTLEGHAYGVSYL 273

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    LI+   D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 274 AWSPD-DVYLIACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 332

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    + +  E      +W    G  +  +    +  G  F     
Sbjct: 333 RG---QFYQCDLDGN----LLESWEGVRVQCLWCMGDGRTVLASDTHQRIRGYSFE---- 381

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 382 --DLTDRNIVQEDHPIMSFTVSKNGR 405


>gi|167946905|ref|ZP_02533979.1| hypothetical protein Epers_10280 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 284

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 40/183 (21%)

Query: 266 SSNGKRALISVQKDE----------AMDIYSVDLQSNATERLTNT-----LFINISASYS 310
           S +G+R L S++  +          + +I+      ++  R+  +        +I+  Y 
Sbjct: 76  SYDGERLLFSLRLPQIEGAEVADQPSWNIWEYSRADHSLRRIIPSDTLAEAGHDIAPHYL 135

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD  +I+F S R+   +  ++         +++                           
Sbjct: 136 PDG-RILFSSSRQKSAKALLLDEGKPQYPALNE---------------------ARQEPI 173

Query: 371 FAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR-KKDGDTGSKLYSIDLNGRNE 428
           F + +M  DGS  + +    S+   PT    GR ++FSR ++       LY ++ +G   
Sbjct: 174 FVLHLMNADGSNIQQISFNQSHDLDPTVLSDGR-VVFSRWQRSSGDAINLYQMNPDGTEL 232

Query: 429 TLI 431
            L+
Sbjct: 233 QLL 235



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 22/208 (10%), Positives = 64/208 (30%), Gaps = 53/208 (25%)

Query: 220 SPNQQKVAYATYDDE--------DILRVYLMDTRIDRAPKRIGNFR-----SMILAPRFS 266
           S + +++ ++    +                 +R D + +RI            +AP + 
Sbjct: 76  SYDGERLLFSLRLPQIEGAEVADQPSWNIWEYSRADHSLRRIIPSDTLAEAGHDIAPHYL 135

Query: 267 SNGKRALISVQKDEAMD------------------------IYSVDLQSNATERLTNTLF 302
            +G R L S  + ++                          ++ ++   +  ++++    
Sbjct: 136 PDG-RILFSSSRQKSAKALLLDEGKPQYPALNEARQEPIFVLHLMNADGSNIQQISFNQS 194

Query: 303 INISASYSPDSSQIVFESDREGKEQL--YVMQSNGSDQKRI---------SQDKEASYFD 351
            ++  +   D   +     R   + +  Y M  +G++ + +         +      +  
Sbjct: 195 HDLDPTVLSDGRVVFSRWQRSSGDAINLYQMNPDGTELQLLYGANSHATGTNGAAVQFLR 254

Query: 352 PVWSPQGDLIA----FTKFSGEKFAIGV 375
           P   P G L+     F   +G    + +
Sbjct: 255 PRELPDGGLLTLLKPFNGLNGGGDLVRI 282


>gi|68396095|ref|XP_693216.1| PREDICTED: WD repeat-containing protein 26 [Danio rerio]
 gi|82079031|sp|Q5SP67|WDR26_DANRE RecName: Full=WD repeat-containing protein 26
 gi|55962632|emb|CAI12019.1| novel protein [Danio rerio]
 gi|55962861|emb|CAI11628.1| novel protein [Danio rerio]
          Length = 576

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 76/206 (36%), Gaps = 21/206 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + +       ++  +FS +  K+A  + D   I+     DT   +  + +      +   
Sbjct: 260 QQILTEHCNEVWFCKFSNDGTKLATGSKDTTVIIWQVEPDTHQLKLLRTLEGHAYGVSYL 319

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESD 321
            +S +    LI+   D+  +++  ++Q+       +    +   S +++PD  + V    
Sbjct: 320 AWSPD-DVYLIACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFVTGGQ 378

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFT----KFSGEKFAIGVM 376
           R    Q Y    +G+    + +  E      +W    G  +  +    +  G  F     
Sbjct: 379 RG---QFYQCDLDGN----LLESWEGVRVQCLWCMGDGRTVLASDTHQRIRGYSFE---- 427

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGR 402
             D +   ++ ED  + + T S +GR
Sbjct: 428 --DLTDRNIVQEDHPIMSFTVSKNGR 451


>gi|297196961|ref|ZP_06914358.1| WD-40 repeat-containing protein [Streptomyces sviceus ATCC 29083]
 gi|297146544|gb|EDY61555.2| WD-40 repeat-containing protein [Streptomyces sviceus ATCC 29083]
          Length = 338

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 53/192 (27%), Gaps = 21/192 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  + A           + +    I   P  +      +    FS +G R  +S  
Sbjct: 21  AFSPDNARFA----TGGSDTHLRVRSIGIGAPPLEVPT-DGAVSGMAFSPDGTRIAVS-- 73

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D             A  +       ++ S  + P+   IV          + V+     
Sbjct: 74  -DFEQVFLRDSATGTALWQGPLDPGNSVNSVRFGPEGRLIVAT-----DTLVAVLDQASG 127

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIG----VMK-KDGSQERLLVED 389
           + K+          D   S  G  IA    +  G          V     G +   L   
Sbjct: 128 EIKQRITVNPPLIADVDLSRDGTRIALAVDERHGGNHHHAGSARVHDVATGKEISRLTPK 187

Query: 390 SNLQAPTWSPSG 401
             + A  +SP G
Sbjct: 188 DAVFAVAFSPDG 199



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 74/231 (32%), Gaps = 30/231 (12%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY-----LMDTRID 247
           + V+D+    I+        ++ +   S +  ++A A  +       +     + D    
Sbjct: 119 VAVLDQASGEIKQRITVNPPLIADVDLSRDGTRIALAVDERHGGNHHHAGSARVHDVATG 178

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--I 305
           +   R+   +  + A  FS +G   L     D        + QS      T     +   
Sbjct: 179 KEISRLT-PKDAVFAVAFSPDGLNVLCCAADDTTRMF---EAQSGKQVWPTPEDIDDQVT 234

Query: 306 SAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQK---------RISQDKEASYFDPV 353
           + S   + P     V     +G  +  V+ ++   ++         +       +     
Sbjct: 235 APSCLAFDPKGKWTV-VGGSDGFAR--VLDADTGVERGRAPKLNLGQPEDQSFGAVTHVA 291

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           +SP G   A          + +   +G +   +  D  + A  +SP+GR L
Sbjct: 292 FSPNGKHAASASIDN---VVRLFNVEGKELYTVSTD-EVLALRFSPNGRWL 338



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 57/153 (37%), Gaps = 15/153 (9%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             + A  FS +  R   +   D  + + S+ + +   E  T+        ++SPD ++I 
Sbjct: 15  GSVQAVAFSPDNARFA-TGGSDTHLRVRSIGIGAPPLEVPTD--GAVSGMAFSPDGTRIA 71

Query: 318 FESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             SD    EQ+++  S       +   D   S     + P+G LI  T        + V+
Sbjct: 72  -VSD---FEQVFLRDSATGTALWQGPLDPGNSVNSVRFGPEGRLIVATDT-----LVAVL 122

Query: 377 KKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFS 407
            +   +  +R+ V    +     S  G  +  +
Sbjct: 123 DQASGEIKQRITVNPPLIADVDLSRDGTRIALA 155


>gi|256419796|ref|YP_003120449.1| 6-phosphogluconolactonase [Chitinophaga pinensis DSM 2588]
 gi|256034704|gb|ACU58248.1| 6-phosphogluconolactonase [Chitinophaga pinensis DSM 2588]
          Length = 376

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 45/332 (13%), Positives = 105/332 (31%), Gaps = 53/332 (15%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           D    K ++   +  S             ++Y   T         + +VS +   G+   
Sbjct: 22  DTTKEKYLLIGTYTKSADEG--------INVYAFNTT-----TGTLRYVSTT--KGVDNP 66

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           S  V+  D  ++  +  + +  +    +      + +             + T  D    
Sbjct: 67  SYLVIAPDQQHVYSVNENNEGGVSAFEWDTVSGNLTFLNKQVSGGASPCYITTDTDGKYV 126

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMD--IYSVDLQSNATERLTNTLFINISASY 309
            +GN+    L+          ++ V+ D  +D  + +++       +            +
Sbjct: 127 IVGNYSGGSLS----------VLPVRNDGRIDAPVQTIEHTGTGPNKERQEKPHVHCTVF 176

Query: 310 SPDSSQIVFESDREGKEQLYVMQS-------------------NGSDQKRISQDKEASYF 350
            PD  + ++ SD  G +Q+ +                       G+  + I+      + 
Sbjct: 177 GPD-KKTLYVSD-LGIDQIVIYNYKQGDVLPLVPADTGYAALNPGAGPRHITFHPNGKWA 234

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
             +    G + AF    G       +    +  +  +  +++     SP G+ L ++  +
Sbjct: 235 YVIHELDGKVTAFNYVRGRLIPFQTLSTLSAAYKGPISGADIH---ISPDGKFL-YASNR 290

Query: 411 DGDTGSKLYSIDL-NGRNETLINTPAYASDPQ 441
                  +YSID  NGR E     P+   +P+
Sbjct: 291 QKLNNIVIYSIDRKNGRLEKKGEQPSGGKEPR 322


>gi|118473292|ref|YP_888896.1| peptidase S9, prolyl oligopeptidase [Mycobacterium smegmatis str.
           MC2 155]
 gi|118174579|gb|ABK75475.1| peptidase S9, prolyl oligopeptidase [Mycobacterium smegmatis str.
           MC2 155]
          Length = 663

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/199 (11%), Positives = 60/199 (30%), Gaps = 10/199 (5%)

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
               R +       + +S      D    +            +++L  +DR+      + 
Sbjct: 185 ADGARNLTERPGVALRESTFDVSPDGAFVVATWHVPAPGAATRSTLVRIDRETGARTTIA 244

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDE---DILRVYLMDTRIDRAPKRIGNFRSMI---- 260
                 L  P  +P+   +A+         +  R+ L   R     +++G +  +     
Sbjct: 245 EDPQADLEHPVIAPDGGALAFTRETHSTPTEPPRITLCCMRFGNDDEQLGEWAEVATEWD 304

Query: 261 ---LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               +  +S++    +++   +    ++SV   +    RLT+          +P      
Sbjct: 305 RWPSSLAWSADASALIVTADDNGRGPVFSVHPDTGTVTRLTDDDHTYTDVCPAPGGIIYA 364

Query: 318 FESDREGKEQLYVMQSNGS 336
             S          +  +G+
Sbjct: 365 LRSSYAVPPHPVRIDPDGT 383



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/187 (11%), Positives = 53/187 (28%), Gaps = 24/187 (12%)

Query: 265 FSSNGKRALISVQKD-----EAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVF 318
            S +G   + +             +  +D ++ A   +      ++     +PD   + F
Sbjct: 206 VSPDGAFVVATWHVPAPGAATRSTLVRIDRETGARTTIAEDPQADLEHPVIAPDGGALAF 265

Query: 319 E----SDREGKEQLYVM-------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
                S      ++ +             +   ++ + +       WS     +  T   
Sbjct: 266 TRETHSTPTEPPRITLCCMRFGNDDEQLGEWAEVATEWDRWPSSLAWSADASALIVTADD 325

Query: 368 GEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +  +  +  D      L +D        P  +P G  +I++ +           ID +
Sbjct: 326 NGRGPVFSVHPDTGTVTRLTDDDHTYTDVCP--APGG--IIYALRSSYAVPPHPVRIDPD 381

Query: 425 GRNETLI 431
           G    L 
Sbjct: 382 GTVTELP 388



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 70/218 (32%), Gaps = 21/218 (9%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL----RVYLMDTRIDRAP 250
           + D DGA      P           SP+   V    +           +  +D       
Sbjct: 182 LFDADGARNLTERPGVALRESTFDVSPDGAFVVATWHVPAPGAATRSTLVRIDRETGART 241

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDL----QSNATERL-------T 298
               + ++ +  P  + +G     + +      +   + L      N  E+L       T
Sbjct: 242 TIAEDPQADLEHPVIAPDGGALAFTRETHSTPTEPPRITLCCMRFGNDDEQLGEWAEVAT 301

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  S ++S D+S ++  +D  G+  ++ +  +     R++ D + +Y D   +P G
Sbjct: 302 EWDRWPSSLAWSADASALIVTADDNGRGPVFSVHPDTGTVTRLT-DDDHTYTDVCPAPGG 360

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            + A             +  DG+    + E     AP 
Sbjct: 361 IIYALRSSYAVPPHPVRIDPDGT----VTELPCFDAPA 394



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 42/113 (37%), Gaps = 15/113 (13%)

Query: 264 RFSSNGKRALISVQK------DEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQI 316
             S +G R + +V        +    ++ +D        RLT  L    +  ++ D   +
Sbjct: 22  AVSPDGTRVVTTVSTLNAKRTEFVTALWELDPAGQQPARRLTRGLKGESAPVFTADGD-V 80

Query: 317 VFESDREGKEQ------LYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIA 362
           +F + R  ++       L+ + ++G +  + +S     S      +    ++A
Sbjct: 81  LFLAVRPTEDDEKPPAALWRLPAHGGEAHEMLSLPGGVSAAASARTADVTVVA 133


>gi|242211708|ref|XP_002471691.1| predicted protein [Postia placenta Mad-698-R]
 gi|220729247|gb|EED83125.1| predicted protein [Postia placenta Mad-698-R]
          Length = 1068

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 94/294 (31%), Gaps = 46/294 (15%)

Query: 190 KNSLCVMDRDGA----NIRYLTPSRDQILFEP----RFSPNQQKVAYATYDDEDILRVYL 241
            N L  +D DG     N R           +P    + SP+ + +A +      + R   
Sbjct: 72  SNVLVSVDDDGRALLVNFRRGVVLHHFNFHKPVKAIKISPDGKYIAVSHDSHVQVWRTPN 131

Query: 242 MDTRIDRA---PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATERL 297
              R        +        ++   +S +  R  I+  +D    ++++D L+    +  
Sbjct: 132 HLIREFAPFNLHRTYTGHHDEVVNIEWSPD-SRCFITASRDMTARLFTLDPLEGFRPKTF 190

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ------------------- 338
                I I+A +S D   I +   R+G    +  + +G +                    
Sbjct: 191 AGHRDIVINAYFSADGKTI-YTVSRDGAVFTWKAKVSGEESDSDDTEPIASSSSLGDTIA 249

Query: 339 -------KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                  KR   ++  +        +   +    FS   F +  M    +   L +    
Sbjct: 250 QTRWGVHKRNYFNQPGTRVVCSTFHRASNLLVVGFSTGVFGLWEMPAFSNLHTLSISQEK 309

Query: 392 LQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNGRNETLINTPAYASDP 440
           + +   + SG  L F   + G        S+ Y +   G   T+ NT AYA D 
Sbjct: 310 ISSVAVNASGEWLAFGASRLGQLLVWEWQSQSYVLKQQGHFSTM-NTVAYAPDG 362


>gi|194742241|ref|XP_001953614.1| GF17851 [Drosophila ananassae]
 gi|190626651|gb|EDV42175.1| GF17851 [Drosophila ananassae]
          Length = 332

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 76/189 (40%), Gaps = 17/189 (8%)

Query: 239 VYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           V + D R D   K     +     +++   SS+G+    S   D +M ++  D ++   +
Sbjct: 65  VKVWDVREDNTLKLRHQLKGHALGVVSVAVSSDGQTIA-SSSLDSSMCLW--DARTGDKK 121

Query: 296 RL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            L T       +  +SP +  ++     +GK  +Y +++  ++Q   +Q+ + +     +
Sbjct: 122 HLLTFGPVDLWTVGFSPCNKYVI-SGLNDGKISMYSVETGKAEQTLDAQNGKYTL-SIAY 179

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDG 412
           SP G  IA     G    I +      +    +E   +   +  +SP+ + L+       
Sbjct: 180 SPDGKYIASGAIDG---IITIFDVAAGKVAQTLEGHAMPVRSLCFSPNSQMLLTGSD--- 233

Query: 413 DTGSKLYSI 421
           D   KLY +
Sbjct: 234 DGHMKLYDV 242



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 65/182 (35%), Gaps = 14/182 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   + L     +      +SP+ + +A    D      + + D    +  + +      
Sbjct: 160 GKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDG----IITIFDVAAGKVAQTLEGHAMP 215

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + +  FS N  + L++   D  M +Y V   S+    L+      +  S+S D       
Sbjct: 216 VRSLCFSPN-SQMLLTGSDDGHMKLYDV-AHSDVVGTLSGHASWVLCVSFSEDGKHFA-S 272

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           S  +   +++    + S++K +    E S   +   +SP  D +A +    +   I    
Sbjct: 273 SSSDHSVKVW----DTSERKCLHTFAEHSDQVWGVRYSPGNDKVA-SASEDKSLNIYYCP 327

Query: 378 KD 379
            +
Sbjct: 328 PN 329


>gi|182677146|ref|YP_001831292.1| peptidase S9 prolyl oligopeptidase [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182633029|gb|ACB93803.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Beijerinckia indica subsp. indica ATCC 9039]
          Length = 693

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 71/193 (36%), Gaps = 23/193 (11%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFES----DR-- 322
           +  + S ++D ++ I     +  A  R+ T+         + P+  +++       DR  
Sbjct: 127 RTIIFSDRRDGSVWIIEGQGEGAAPRRIPTSENCRYADFIFDPNHPRVLCVREDHRDRPP 186

Query: 323 -EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-------EKFAIG 374
            + K  +  +  + SD++R+  +       P  SP G ++ +  +          +  + 
Sbjct: 187 TDPKSAIVSLPLDASDKERVIVEGPDFLSSPRLSPDGKILVWLSWEHPFMPWDWTRLHLA 246

Query: 375 VMKKDGSQERLLVEDSNLQA----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +   GS    +V     +     P ++P G  L F   + G     LY++  + +   +
Sbjct: 247 PLTLYGSITPAVVLAGRERESIVQPGFAPDGT-LHFCSDRTG--WWNLYALRGD-KIVPV 302

Query: 431 INTPAYASDPQWV 443
               A    P WV
Sbjct: 303 APVDAEIGGPHWV 315



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 90/283 (31%), Gaps = 40/283 (14%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLW---DVKDRKQIIGKKFFSSPASWR-------KIAHT 157
           A   V  RV + G     VE R     D +D    I +      A  R       + A  
Sbjct: 106 APFYVGTRVHEYGGGAYAVENRTIIFSDRRDGSVWIIEGQGEGAAPRRIPTSENCRYADF 165

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           I D  +  +   + D   R             K+++  +  D ++   +       L  P
Sbjct: 166 IFDPNHPRVLCVREDHRDR--------PPTDPKSAIVSLPLDASDKERVIVEGPDFLSSP 217

Query: 218 RFSPNQQKVAYATYDDEDILRVY--------LMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R SP+ + + + +++   +   +         +   I  A    G  R  I+ P F+ +G
Sbjct: 218 RLSPDGKILVWLSWEHPFMPWDWTRLHLAPLTLYGSITPAVVLAGRERESIVQPGFAPDG 277

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS---------PDSSQIVFES 320
                   +    ++Y+  L+ +    +           +          PD  ++V   
Sbjct: 278 T-LHFCSDRTGWWNLYA--LRGDKIVPVAPVDAEIGGPHWVFAQHYYAFLPD-KRLVASI 333

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            R+G     V+  +      + Q +     D    P G  +AF
Sbjct: 334 VRDGIRTACVIDGDVITPLSLGQGQAGQVADC-PQPIGQGLAF 375


>gi|257077125|ref|ZP_05571486.1| tricorn protease [Ferroplasma acidarmanus fer1]
          Length = 1026

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 7/75 (9%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQL 328
                  D    +++ ++     ERLTN L I  +   SPD   + F            +
Sbjct: 17  IAFVSDND----LWTYNIDDKNVERLTNNLGIITNPRISPDKKYVYFRLMTGKSGDSSDI 72

Query: 329 YVMQSNGSDQKRISQ 343
           Y +     +  RI+ 
Sbjct: 73  YSIDIENGNLNRITY 87



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 48/235 (20%), Positives = 81/235 (34%), Gaps = 57/235 (24%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---SVQKDEAM 282
           +A+ + +D     +       D+  +R+ N   +I  PR S + K       + +  ++ 
Sbjct: 17  IAFVSDNDLWTYNID------DKNVERLTNNLGIITNPRISPDKKYVYFRLMTGKSGDSS 70

Query: 283 DIYSVDLQSNATERLT---------------------NTLFINISASYSPDSSQIVFESD 321
           DIYS+D+++    R+T                     N L I+  A Y P  + ++F   
Sbjct: 71  DIYSIDIENGNLNRITYLCGKSTSRRMYTSIAGFDKNNNLIISTDA-YYPFGTPMLF--- 126

Query: 322 REGKEQLYVMQSNGSDQKRISQD-----KEASYFDPVW--SPQGDLIAFTKFSGEKFAIG 374
           R   + L  +   G     I           +   P W     G            F I 
Sbjct: 127 RIINKNLEPLNL-GPALTIIYYKNNIILGRNTIDMPHWKKYKGGTRGKILSAKNNDFKI- 184

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           V+  +          SN+ +P        L F    +G   + +YS DLNG N T
Sbjct: 185 VVDLE----------SNVNSPMICNDN--LYFISDHEGT--ANIYSTDLNGNNIT 225



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 10/146 (6%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           ++  +I   ++             I  S   SPD++ I   ++R    +L+++       
Sbjct: 342 EDNNNILIYNIDKTLRNSFEFRNGIIFSLKVSPDNNYIAIGNNR---YELFILNIKDGGI 398

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFS------GEKFAIGVMKKDGSQER-LLVEDSN 391
            +I + K     D  WS    L+A++             +I +     +++       S 
Sbjct: 399 NKIDESKSGVINDFSWSNDSMLLAYSYPETEYYGYNGSSSIKLYDLKSNKKYDATTSGSV 458

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSK 417
              P +S  G  L +  K+  D  S 
Sbjct: 459 DFNPVFSIDGNYLFYLSKRSLDPVSD 484



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 11/139 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N++ + + D   +R     R+ I+F  + SP+   +A       +   +++++ +     
Sbjct: 345 NNILIYNID-KTLRNSFEFRNGIIFSLKVSPDNNYIAI----GNNRYELFILNIKDGGIN 399

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFIN 304
           K   +   +I    +S++      S  +      + +  I   DL+SN     T +  ++
Sbjct: 400 KIDESKSGVINDFSWSNDSMLLAYSYPETEYYGYNGSSSIKLYDLKSNKKYDATTSGSVD 459

Query: 305 ISASYSPDSSQIVFESDRE 323
            +  +S D + + + S R 
Sbjct: 460 FNPVFSIDGNYLFYLSKRS 478



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 16/118 (13%), Positives = 42/118 (35%), Gaps = 6/118 (5%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                 F+ ++   +  +  G  +  L +++     I  +  S+  ++ +  +S +   +
Sbjct: 362 FRNGIIFSLKVSPDNNYIAIGNNRYELFILNIKDGGINKIDESKSGVINDFSWSNDSMLL 421

Query: 227 AYA-----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           AY+      Y       + L D + ++         S+   P FS +G       ++ 
Sbjct: 422 AYSYPETEYYGYNGSSSIKLYDLKSNKKYDA-TTSGSVDFNPVFSIDGNYLFYLSKRS 478



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIF--SRKKDGDTG 415
           +LIAF   +     +     D      L  +   +  P  SP  + + F     K GD+ 
Sbjct: 15  NLIAFVSDND----LWTYNIDDKNVERLTNNLGIITNPRISPDKKYVYFRLMTGKSGDS- 69

Query: 416 SKLYSIDLNGRNETLIN 432
           S +YSID+   N   I 
Sbjct: 70  SDIYSIDIENGNLNRIT 86


>gi|154276878|ref|XP_001539284.1| transcriptional repressor TUP1 [Ajellomyces capsulatus NAm1]
 gi|150414357|gb|EDN09722.1| transcriptional repressor TUP1 [Ajellomyces capsulatus NAm1]
          Length = 568

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 57/415 (13%), Positives = 128/415 (30%), Gaps = 81/415 (19%)

Query: 45  YSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW- 103
             P   A  +       G ++S  V   L        +  D        P       DW 
Sbjct: 195 AYPDPRASPQIHRPTPPGQQLSYRVGNTLAD------LDPDKLP-----PSQKREGSDWY 243

Query: 104 --------NSLGAQVL-------VTGRVIKEGKDRLRV-----EFRLWDVKDRKQIIGKK 143
                     L   ++       V   V      +          +++DV   + +   +
Sbjct: 244 AVFNPEVPRVLDVDLVHHLVHDSVVCCVRFSNDGKYVATGCNRSAQIFDVATGQLVTALQ 303

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV---SGIIKNSLCVMDRDG 200
                           DD   S+  ++GD   R +  S       +G     + V D   
Sbjct: 304 ----------------DD---SVLDKEGDLYIRSVCFSPDGRYLATGAEDKQIRVWDIAT 344

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             I+++    +Q ++   F+ N + +A  + D      V L D  +D   + I +    +
Sbjct: 345 RTIKHIFSGHEQDIYSLDFARNGRYIASGSGDK----TVRLWDI-VDGKQELILSIEDGV 399

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTN---TLFINISASYSPDSSQI 316
                S +G+    +   D+++ ++  D  +    ERL N    +    S +++P+   +
Sbjct: 400 TTVAISPDGRFVA-AGSLDKSVRVW--DTTTGYLVERLENPDGHMDSVYSVAFAPNGRDL 456

Query: 317 VFESDREGKEQLYVMQSN----------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           V  S  +   +++ +             G    R  +  +        +P G  +     
Sbjct: 457 VSGSL-DKTIKMWELTPPRGMVPGAGPKGGKCVRTFEGHKDFVLSVCLTPDGRWVMSGSK 515

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 +           ++++       + +PS    +F+    GD  ++++ +
Sbjct: 516 DRG---VQFWDPATGNAHMMLQGHKNSVISVAPSPTGNLFATG-SGDMRARIWRL 566


>gi|148909145|gb|ABR17673.1| unknown [Picea sitchensis]
          Length = 399

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 76/229 (33%), Gaps = 20/229 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG +   + + D    N+ ++       +   R+ P  Q V   + D       ++ +  
Sbjct: 130 SGGLDGVVRIWDASTGNLIHVLDGPGGGIEWVRWHPKGQLVLAGSED----YTTWMWNAD 185

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFIN 304
           + +           +    F+ +GK    +   D ++ ++  + Q+    +LT      +
Sbjct: 186 LGKCLSVYTGHSESVTCGDFTPDGKTIC-TGSADGSLRVW--NPQT-QESKLTVKGHPYH 241

Query: 305 ISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                  + S DS+ +V  S       ++V+                S     +SP    
Sbjct: 242 TEGLTCLNISSDSTLVVSGSTEG---SVHVVNIKNGKVVGSLVGHSGSIECVGFSP---S 295

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSR 408
           + +    G    + + +   S  R     +  +   +WS S R +I + 
Sbjct: 296 LTWVATGGMDKKLMIWELQSSSLRCTCQHEEGVMRLSWSSSSRHIISAS 344


>gi|88704688|ref|ZP_01102401.1| dipeptidyl peptidase IV family protein [Congregibacter litoralis
           KT71]
 gi|88701009|gb|EAQ98115.1| dipeptidyl peptidase IV family protein [Congregibacter litoralis
           KT71]
          Length = 793

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 45/343 (13%), Positives = 95/343 (27%), Gaps = 86/343 (25%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-----Y 231
           I+F         +   + ++  DGA    +            +S +Q K+   T     +
Sbjct: 115 IVFYDPRSDERRVLVDVAMLTPDGAEAPLVIDDYH-------WSKDQSKLLVYTNSKKVW 167

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             +     +++D       +  G+ ++  L   +FS +  +     + D    ++  DL 
Sbjct: 168 RVKSRGDYWVLDLESGELRQLGGDAKASTLQFAKFSPDADKVAYVKEAD----VFVEDLA 223

Query: 291 SNATERLTNTLF-----------------INISASYSPDSSQIVF-ESDREG-------- 324
           S A  +L+                     I     +SPD  +I + + D  G        
Sbjct: 224 SGAITQLSERAGNHIINGIMSWAYEEEFSIRDGFRWSPDGQRIAYWQFDTSGVRNFTLIN 283

Query: 325 ----------------------KEQLYVMQSNGSDQKRISQDKEASYFDP---VWSPQGD 359
                                   ++  +  +G          +          W+P  D
Sbjct: 284 NTDALYPEVVELPYPKVGETISAARVGTVDVSGGATVWADLPGDPRQMYVPRMDWAPSSD 343

Query: 360 LIAF---TKFSGEKFAIGVMKKDGSQERLLVED-----SNLQAPTWSPSGRSLIFSRKKD 411
            I      +              G    + VE       +++   W       ++  ++D
Sbjct: 344 KIIVQHLNRRQDTNTVFYADAGSGEATEIFVEQAPKYLFDVEDVHWLEDSGDFLWLSERD 403

Query: 412 GDTGSKLYSIDLNGRNET-LINTPAYASDPQ-------WVGFM 446
           G     +Y    +G+    L       ++         WV FM
Sbjct: 404 G--WWHIYRATADGKTFRDLTPGDFDITEVAHVDETSGWVYFM 444



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/224 (14%), Positives = 67/224 (29%), Gaps = 35/224 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+SP+ Q++AY  +D   +    L++      P+ +      +        G+       
Sbjct: 258 RWSPDGQRIAYWQFDTSGVRNFTLINNTDALYPEVVELPYPKV--------GETI----- 304

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISAS--------YSPDSSQIVFE--SDREGKEQ 327
              A  + +VD+   A    T    +             ++P S +I+ +  + R+    
Sbjct: 305 --SAARVGTVDVSGGA----TVWADLPGDPRQMYVPRMDWAPSSDKIIVQHLNRRQDTNT 358

Query: 328 LYVMQSNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           ++   +   +   I  ++   Y     D  W        +       + I     DG   
Sbjct: 359 VFYADAGSGEATEIFVEQAPKYLFDVEDVHWLEDSGDFLWLSERDGWWHIYRATADGKTF 418

Query: 384 RLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNG 425
           R L                   + F    +      L+   L+G
Sbjct: 419 RDLTPGDFDITEVAHVDETSGWVYFMASPEAMESRFLFRSRLDG 462


>gi|157374622|ref|YP_001473222.1| peptidase S9 prolyl oligopeptidase [Shewanella sediminis HAW-EB3]
 gi|157316996|gb|ABV36094.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sediminis HAW-EB3]
          Length = 683

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 68/184 (36%), Gaps = 18/184 (9%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYS-- 286
           +          L     ++ P  +  N         +S  G R +   +      +    
Sbjct: 126 SLFVSKAKDQLLYRIAPNQDPVPLTPNGTRHADCVSYS-KGSRIICVREDHRKTGMPVSG 184

Query: 287 ---VDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYV--MQSNG 335
              ++L  S   E L++      +   SPD++Q+ + S           QL+V  ++  G
Sbjct: 185 LVALNLNFSGEGEVLSSGADFYSAPRVSPDNNQMAWISWNHPNMPWDNTQLWVGELEPKG 244

Query: 336 S--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
              + +R+ +D+E S   P++SP G  + F       + +  +  +G  E +L  ++   
Sbjct: 245 GLHNARRLIEDREGSITQPLYSPDGQ-LYFVADFNNWWNLYRINSEGELEHVLDMEAEFA 303

Query: 394 APTW 397
            P W
Sbjct: 304 VPDW 307



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 71/190 (37%), Gaps = 22/190 (11%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD---REGK 325
           G+   +S  KD+ +   + +        LT     +         S+I+   +   + G 
Sbjct: 124 GQSLFVSKAKDQLLYRIAPNQD---PVPLTPNGTRHADCVSYSKGSRIICVREDHRKTGM 180

Query: 326 E--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGV--M 376
               L  +  N S +  +       Y  P  SP  + +A+  ++          + V  +
Sbjct: 181 PVSGLVALNLNFSGEGEVLSSGADFYSAPRVSPDNNQMAWISWNHPNMPWDNTQLWVGEL 240

Query: 377 KKDGS--QERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +  G     R L+ED   ++  P +SP G+ L F    D +    LY I+  G  E +++
Sbjct: 241 EPKGGLHNARRLIEDREGSITQPLYSPDGQ-LYFVA--DFNNWWNLYRINSEGELEHVLD 297

Query: 433 TPAYASDPQW 442
             A  + P W
Sbjct: 298 MEAEFAVPDW 307



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 58/158 (36%), Gaps = 20/158 (12%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I    +   +G+  + L  ++ + +    +  S       PR SP+  ++A+ +++  ++
Sbjct: 169 ICVREDHRKTGMPVSGLVALNLNFSGEGEVLSSGADFYSAPRVSPDNNQMAWISWNHPNM 228

Query: 237 LRVYLM--------DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                            +  A + I +    I  P +S +G +       +   ++Y ++
Sbjct: 229 PWDNTQLWVGELEPKGGLHNARRLIEDREGSITQPLYSPDG-QLYFVADFNNWWNLYRIN 287

Query: 289 LQSNATERLTNTLFINISASYS-PD----SSQIVFESD 321
            +      L      ++ A ++ PD    +    FES 
Sbjct: 288 SEGELEHVL------DMEAEFAVPDWKLGNHNYAFESH 319


>gi|291407080|ref|XP_002719833.1| PREDICTED: WD SOCS-box protein 2 [Oryctolagus cuniculus]
          Length = 426

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 86/237 (36%), Gaps = 33/237 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDIL------------RVYLMDTRIDRAPKRIGNFRSM 259
            + F P  SP  +K+    +     +            ++ + + +       +   + +
Sbjct: 118 GLAFSPWPSPPSRKLWARHHPQGPDVSCLILATGLNDGQIKIWEVQTGLLLLNLSGHQDV 177

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +    F+ +G   L+S  +D+ + I+ ++      + L+  L      S SPD S +   
Sbjct: 178 VRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC-- 235

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
               G++ +++         R  +  ++S     +SP   L+    +      I      
Sbjct: 236 -SAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPDSALLVTASYDTS--VIMWDPYT 292

Query: 380 GSQERLL-------------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           G + R L             V  S+L++  +SP G   ++      D   ++++++L
Sbjct: 293 GERLRSLRHAQLDPAMDDSDVHMSSLRSVCFSPEG---LYLATVADDRLLRIWALEL 346



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 71/247 (28%), Gaps = 41/247 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 38  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEHFIPKGFEAKSRSSKN 97

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKR---------------ALISVQKDEAM 282
           D +   +PK            +  +P  S   ++                L +   D  +
Sbjct: 98  DPKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQGPDVSCLILATGLNDGQI 157

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 158 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 216

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 217 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 274

Query: 403 SLIFSRK 409
            L+ +  
Sbjct: 275 LLVTASY 281


>gi|297582501|ref|YP_003698281.1| 40-residue YVTN family beta-propeller repeat-containing protein
           [Bacillus selenitireducens MLS10]
 gi|297140958|gb|ADH97715.1| 40-residue YVTN family beta-propeller repeat protein [Bacillus
           selenitireducens MLS10]
          Length = 307

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 74/237 (31%), Gaps = 28/237 (11%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + +K+  A+   E    V+++DT+ D         + +     FS +G    I      
Sbjct: 86  NDGKKLYLASTFSEK---VFIIDTKTDEIESVTKTGQKLSHMISFSPDGNTVYI--PNIG 140

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           + ++  +D  +   E +T  + +       +  PD   +   +  E    +     +   
Sbjct: 141 SHNLTVMDTDT---ETITTHIPVGKGPEGVAVHPDGRHLYVANQEEDTLHI----LDTES 193

Query: 338 QKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAI--GVMKKDGS----QERLLVEDS 390
            + + + +        V+SP G             +I       +G     + + L    
Sbjct: 194 HEVLYKRRVGHVPVRLVFSPDGKYALIANRESNDVSIIDTAQHINGETRPWEIKRLPVGV 253

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
                 +SP G+    +  K  D       ID+    E          D   + +++
Sbjct: 254 WAGGIVFSPDGQKAYVANNKTNDVS----VIDMTTLKEERRFDVGIHPDG--IAYLE 304



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/264 (15%), Positives = 94/264 (35%), Gaps = 37/264 (14%)

Query: 161 DIYQSITGEKGDF--------NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +I + +T    DF        + + L+++ +         + ++D     I  +T +  +
Sbjct: 66  EIVRHLTHPDFDFPHGLGLTNDGKKLYLAST-----FSEKVFIIDTKTDEIESVTKTGQK 120

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +     FSP+   V Y        L V   DT        +G     +       +G+  
Sbjct: 121 LSHMISFSPDGNTV-YIPNIGSHNLTVMDTDTETITTHIPVGKGPEGV---AVHPDGRHL 176

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            ++ Q+++   ++ +D +S+          + +   +SPD       ++RE  + + ++ 
Sbjct: 177 YVANQEEDT--LHILDTESHEVLYKRRVGHVPVRLVFSPDGKY-ALIANRESND-VSIID 232

Query: 333 S----NGSDQK-RISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +    NG  +   I +     +    V+SP G   A+   +     + V+     +E   
Sbjct: 233 TAQHINGETRPWEIKRLPVGVWAGGIVFSPDGQK-AYVANNKTN-DVSVIDMTTLKEERR 290

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKK 410
            +          P G  + +  K+
Sbjct: 291 FDVG------IHPDG--IAYLEKR 306



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/159 (13%), Positives = 47/159 (29%), Gaps = 10/159 (6%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           LI + KDE   +  V+  +  TE+   T         S D  +  + +   G     +  
Sbjct: 5   LIVLNKDEDT-LSIVNADTGMTEKTVATSHNPHELVVSRDGLKT-YIACSLGNTVDILDN 62

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN- 391
                 + ++            +  G  +       EK  + ++     +   + +    
Sbjct: 63  RTFEIVRHLTHPDFDFPHGLGLTNDGKKLYLASTFSEK--VFIIDTKTDEIESVTKTGQK 120

Query: 392 -LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                ++SP G ++             L  +D +    T
Sbjct: 121 LSHMISFSPDGNTVY----IPNIGSHNLTVMDTDTETIT 155


>gi|114797408|ref|YP_759935.1| dipeptidyl aminopeptidase IV [Hyphomonas neptunium ATCC 15444]
 gi|114737582|gb|ABI75707.1| dipeptidyl aminopeptidase IV [Hyphomonas neptunium ATCC 15444]
          Length = 770

 Score = 53.9 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 65/201 (32%), Gaps = 53/201 (26%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRID---------------------------RAP 250
           RFSP+ ++V +     E+  R  L    ++                           R  
Sbjct: 43  RFSPDGRRVTFLKPRAEESARYDLWQFDVESGAQSLLVDSSVIDPADAELSEEEKALRER 102

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           KRI N R +     +   G    I V     + + ++      T RLT+T      A  S
Sbjct: 103 KRIANVRGIADY-AW---GTADTIIVPAGGDIHLVTLKKGGPETRRLTHTDAFEYDAKVS 158

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE------------------ASYFDP 352
           P  + + F   R+G   LY ++     + RIS + +                    Y   
Sbjct: 159 PRGTHVSFI--RDGA--LYAIELATGTETRISPEAQPEKALSYGVAEFVAQEEMDRYTGY 214

Query: 353 VWSPQGDLIAFTKFSGEKFAI 373
            WSP    IAFT+       I
Sbjct: 215 WWSPDERYIAFTEVDESGVDI 235



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 66/180 (36%), Gaps = 35/180 (19%)

Query: 262 APRFSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIV 317
           A RFS +G+R        ++    D++  D++S A   L ++  I+   A  S +   + 
Sbjct: 41  AVRFSPDGRRVTFLKPRAEESARYDLWQFDVESGAQSLLVDSSVIDPADAELSEEEKAL- 99

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                              ++KRI+  +  + +   W   G        +G    +  +K
Sbjct: 100 ------------------RERKRIANVRGIADY--AW---GTADTIIVPAGGDIHLVTLK 136

Query: 378 KDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           K G + R L      +     SP G  + F R         LY+I+L    ET I+  A 
Sbjct: 137 KGGPETRRLTHTDAFEYDAKVSPRGTHVSFIRD------GALYAIELATGTETRISPEAQ 190



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 80/226 (35%), Gaps = 25/226 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+++ +A+   D+  +  +   D   D+           ++  R+   G+       
Sbjct: 215 WWSPDERYIAFTEVDESGVDIIPRFDIAADQVT---------VIEQRYPRAGR------- 258

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            +  + ++  DL+   T R+++    +  A  +     + F++    + ++   +++G  
Sbjct: 259 PNAKVALHVADLKEERTSRISSVGPDDYLARVNWAHGSLWFQTVNRAQTEIRYNRTDGLP 318

Query: 338 QKRISQDKEASYFDPVWS------PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            +  +   E        S      P G  I  T        I        + R +     
Sbjct: 319 WRVWAPFTEEQGRWVNLSNDFIALPDGG-ILLTHERDGYRHIYWRDASNGEMRQVTFGHW 377

Query: 392 LQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           + +    + P  R + F+  KD      LY++ L   ++ + +  A
Sbjct: 378 VVSDIAGFDPETREIYFTGFKDTPLEKHLYAVHLGLSDQQVASLGA 423


>gi|326446608|ref|ZP_08221342.1| peptidase S9, prolyl oligopeptidase active site region
           [Streptomyces clavuligerus ATCC 27064]
          Length = 612

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 2/79 (2%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGR 402
                  P  SP G+ +AF         +        + R +  D    ++A  W+  GR
Sbjct: 4   GNPDRMSPALSPDGEHLAFLAPYDGVLNVYAGPWRSGEYRPVTADRGRGIRAFAWAGDGR 63

Query: 403 SLIFSRKKDGDTGSKLYSI 421
            L+F + +DGD  ++LY++
Sbjct: 64  HLLFVQDRDGDENTRLYAV 82



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 56/155 (36%), Gaps = 14/155 (9%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFE 319
           ++P  S +G+        D  +++Y+   +S     +T      I A  ++ D   ++F 
Sbjct: 9   MSPALSPDGEHLAFLAPYDGVLNVYAGPWRSGEYRPVTADRGRGIRAFAWAGDGRHLLFV 68

Query: 320 SDREG--KEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV- 375
            DR+G    +LY + + +G+          A    P    Q  +IA    +     IG+ 
Sbjct: 69  QDRDGDENTRLYAVPAGSGAPPAATPAPAPARDLTPYPGVQARIIALDPRTPGGLLIGLN 128

Query: 376 ---------MKKDGSQERLLVEDSNLQAPTWSPSG 401
                     + D +  RL +   N     W   G
Sbjct: 129 LRERSVHDAYRLDIASGRLELAARNEGFSRWVADG 163



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 69/256 (26%), Gaps = 31/256 (12%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            +     P  SP+ + +A+     + +L VY    R         +    I A  ++ +G
Sbjct: 4   GNPDRMSPALSPDGEHLAFLA-PYDGVLNVYAGPWRSGEYRPVTADRGRGIRAFAWAGDG 62

Query: 270 KRALISVQKDE--AMDIYSVDLQSN----------ATERLTNTLF-----INISASYSPD 312
           +  L    +D      +Y+V   S               LT         I +    +P 
Sbjct: 63  RHLLFVQDRDGDENTRLYAVPAGSGAPPAATPAPAPARDLTPYPGVQARIIALDPR-TPG 121

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTKFSGE 369
              I            Y +       +  ++    +     W   G      A       
Sbjct: 122 GLLIGLNLRERSVHDAYRLDIASGRLELAAR----NEGFSRWVADGGLRVRGAVRPRPDG 177

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              + V   + +  R L E     A       ++  G  L     +  DT   L     N
Sbjct: 178 GSTLLVRADESAPWRPLHETGPEDAVALRPVAFTSDGTRLHLLSSRGADTARLLSVDTTN 237

Query: 425 GRNETLINTPAYASDP 440
           GR E       Y  D 
Sbjct: 238 GRYEVRYEDGEYDVDG 253


>gi|220921391|ref|YP_002496692.1| WD-40 repeat-containing protein [Methylobacterium nodulans ORS
           2060]
 gi|219945997|gb|ACL56389.1| WD-40 repeat protein [Methylobacterium nodulans ORS 2060]
          Length = 337

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 88/276 (31%), Gaps = 20/276 (7%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G++  +     R              T   G +   +    +  V+      +   D  G
Sbjct: 68  GRRLVTGGDDGRVAVTAPDGTTETLATARGGAWIDALALHQDGAVAFAAGKRVIARDAKG 127

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              R  T      +    F+P   ++A A Y+        L    +D  P+ +  ++   
Sbjct: 128 ---RERTTEAPSTVRGLAFAPKGYRLALAHYNG-----ATLWYPNLDATPEALA-WKGSH 178

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +   +S +G+  + ++Q++ A+  + +        R+T       S S+S D + +    
Sbjct: 179 IDVTWSPDGRFVVTTMQEN-ALHGWRLQPDRGHM-RMTGYPAKVRSISWSADGNWLA--- 233

Query: 321 DREGKEQLYVMQSN-----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              G E   V   +        Q R    + A      + P+  ++A     G    I  
Sbjct: 234 -TGGAEAAIVWPFDTKEGPTGKQPRECGVRTARVSRVAFHPKAPVLATAYEDGCILLIRF 292

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                   R  V+ S++ A  W   G  L F     
Sbjct: 293 TDGSELLVRPAVKGSSVTALAWDRPGEHLAFGATDG 328



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 68/198 (34%), Gaps = 29/198 (14%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT------ERLTNTLFINISASYSPDSSQIVFESDR 322
           G   ++    D  ++  +   +           RL         A  +PD +     + R
Sbjct: 37  GDGVVLLAAPDGTVERVAAHPEGGILVAAGDGRRLVTGGDDGRVAVTAPDGTTETLATAR 96

Query: 323 EGKEQL----------------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            G                     V+  +   ++R + +  ++     ++P+G  +A   +
Sbjct: 97  GGAWIDALALHQDGAVAFAAGKRVIARDAKGRER-TTEAPSTVRGLAFAPKGYRLALAHY 155

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +G    +     D + E L  + S++   TWSP GR ++ + +++   G   + +  +  
Sbjct: 156 NGAT--LWYPNLDATPEALAWKGSHIDV-TWSPDGRFVVTTMQENALHG---WRLQPDRG 209

Query: 427 NETLINTPAYASDPQWVG 444
           +  +   PA      W  
Sbjct: 210 HMRMTGYPAKVRSISWSA 227


>gi|254577871|ref|XP_002494922.1| ZYRO0A12980p [Zygosaccharomyces rouxii]
 gi|238937811|emb|CAR25989.1| ZYRO0A12980p [Zygosaccharomyces rouxii]
          Length = 824

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 68/208 (32%), Gaps = 14/208 (6%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D   +   Y  D   D   K +      + +  FS + +  + S  +D+ + ++S+D 
Sbjct: 524 SLDGSPLGNRYDPDLPEDATSKTLVGHSGTVYSTSFSPDNRYLV-SSSEDKTVRLWSLDT 582

Query: 290 QSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            S        N    ++   +SP        +  +   +L+          RI       
Sbjct: 583 HSALVSYKGHNHPVWDV--KFSPLGHYFA-TASHDHTARLWSCDHIY--PLRIFAGHLND 637

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFS 407
                + P G  + FT  S +   +  +   G   RL L   + + +   SP GR L   
Sbjct: 638 VDCVSFHPNGCYL-FTGSSDKTCRMWDI-ATGDCVRLFLGLTAPVISTCVSPDGRWL--- 692

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPA 435
                D    ++ I   G+    +    
Sbjct: 693 STGSEDGIINVWDI-GTGKRLKQMRGHG 719



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 58/179 (32%), Gaps = 14/179 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   ++   FSP+ + +  ++ D    +R++ +DT       +  N    +   +F
Sbjct: 546 TLVGHSGTVYSTSFSPDNRYLVSSSED--KTVRLWSLDTHSALVSYKGHNHP--VWDVKF 601

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREG 324
           S  G     +   D    ++S D       R+      ++   S+ P+   + F    + 
Sbjct: 602 SPLGHYFA-TASHDHTARLWSCDHIY--PLRIFAGHLNDVDCVSFHPNGCYL-FTGSSDK 657

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             +++       D  R+     A       SP G  ++     G    I V      + 
Sbjct: 658 TCRMW--DIATGDCVRLFLGLTAPVISTCVSPDGRWLSTGSEDG---IINVWDIGTGKR 711


>gi|167381378|ref|XP_001735688.1| WD repeat domain phosphoinositide-interacting protein [Entamoeba
           dispar SAW760]
 gi|165902213|gb|EDR28100.1| WD repeat domain phosphoinositide-interacting protein, putative
           [Entamoeba dispar SAW760]
          Length = 335

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 55/125 (44%), Gaps = 6/125 (4%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + +A+ +Y +  I  V L      ++ + +     M+    FS + +  + +  + 
Sbjct: 142 SNDGKMIAFPSYQEGSIKLVNL----ETQSEREVQAHIHMVSTMAFSPDSRSLVTASAQG 197

Query: 280 EAMDIYSVD-LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             + ++  + L+     R   +     S ++SP+S  IV  S+R G   +Y ++ +  + 
Sbjct: 198 TLLRVWDTNTLKQKNEFRRGQSQADVYSLNFSPNSELIVTNSNR-GTVHIYGVEGDSENY 256

Query: 339 KRISQ 343
            R S+
Sbjct: 257 NRPSK 261



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 6/112 (5%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S++GK       ++ ++ +  V+L++ +   +   + +  + ++SPDS  +V  S +   
Sbjct: 142 SNDGKMIAFPSYQEGSIKL--VNLETQSEREVQAHIHMVSTMAFSPDSRSLVTASAQG-- 197

Query: 326 EQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             L V  +N   QK   +  +  A  +   +SP  +LI      G     GV
Sbjct: 198 TLLRVWDTNTLKQKNEFRRGQSQADVYSLNFSPNSELIVTNSNRGTVHIYGV 249


>gi|323454788|gb|EGB10657.1| hypothetical protein AURANDRAFT_2638 [Aureococcus anophagefferens]
          Length = 292

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 49/152 (32%), Gaps = 8/152 (5%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               ++     S +G R +     D+     +  +       L        S  + PD S
Sbjct: 9   GHTGVVRCVDVSPDGGRVVTCS--DDRTARINDAVSGKNIAVLEGHGGAVESCMFGPDGS 66

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAI 373
           ++V  S         +  +     K ++ +  A   +   +SP G L+A T        +
Sbjct: 67  RVVTTS---ADATAMIWDAADG-AKLLTLEGHAEKLEGAEYSPDGHLVA-TASEDRTARV 121

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  S   L   +  +   ++SP G  +I
Sbjct: 122 WDALTGESYGVLAGHEGGVTCCSFSPDGLRVI 153



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 73/224 (32%), Gaps = 11/224 (4%)

Query: 183 SVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            VV+     +  + D  DGA +        + L    +SP+   VA A+ D        +
Sbjct: 67  RVVTTSADATAMIWDAADGAKL-LTLEGHAEKLEGAEYSPDGHLVATASEDR----TARV 121

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D     +   +      +    FS +G R +I+  KD+        L+S+         
Sbjct: 122 WDALTGESYGVLAGHEGGVTCCSFSPDGLR-VITGSKDKTARKCRNRLKSSCIFWFPAQA 180

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +  YS D S++V     +   +L+   ++    +   +    +    V S  G +I
Sbjct: 181 RTITACHYSRDGSRVV-TGSWDCSVKLWC--ASTGKIEHTLEGHTKNVTCCVISRDGTVI 237

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +        +        + R+      + +   S     ++
Sbjct: 238 V-SASDDRTAIVWGASTGEVRHRIKGHKGAVTSCAISADHTRVV 280


>gi|323138406|ref|ZP_08073476.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Methylocystis sp. ATCC 49242]
 gi|322396353|gb|EFX98884.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Methylocystis sp. ATCC 49242]
          Length = 651

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 3/99 (3%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPT- 396
            R +  + AS   P  SP G  +A+         I    +D  ++ R L   ++    T 
Sbjct: 11  PRRTFFENASASSPQLSPDGRWLAWLAAVDGVMNIWAAPRDDLTRARPLTRQTDRPIFTY 70

Query: 397 -WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            ++ +   ++F + +DGD    L+ + ++G    L   P
Sbjct: 71  WFARTNAHVLFLKDRDGDENYNLWCVGVDGSARNLTPCP 109



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 53/149 (35%), Gaps = 8/149 (5%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISAS 308
           P+R     +   +P+ S +G+        D  M+I++           LT      I   
Sbjct: 11  PRRTFFENASASSPQLSPDGRWLAWLAAVDGVMNIWAAPRDDLTRARPLTRQTDRPIFTY 70

Query: 309 Y-SPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--- 362
           + +  ++ ++F  DR+G     L+ +  +GS  + ++   +              +    
Sbjct: 71  WFARTNAHVLFLKDRDGDENYNLWCVGVDGS-ARNLTPCPDLFAILLGMHHDDPHLVAVG 129

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                     + ++     + RL+ E+++
Sbjct: 130 MNDRDARWHDLYIVDIRTGERRLVYENTD 158


>gi|308178625|ref|YP_003918031.1| prolyl oligopeptidase family protein [Arthrobacter arilaitensis
           Re117]
 gi|307746088|emb|CBT77060.1| prolyl oligopeptidase family protein [Arthrobacter arilaitensis
           Re117]
          Length = 685

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 61/186 (32%), Gaps = 16/186 (8%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVF------ESDR 322
             +   +   A  +  +DL S A E L   +  F       SPDS+ + +       ++ 
Sbjct: 228 WLVSEGRASMATGLMRIDLHSGAQEMLLSPDGTFEYTMGKISPDSTHLAYGRWHRSTAET 287

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               +L++M        +I+   +    D  W P G  +  T        I  +     +
Sbjct: 288 APVFELWLMDLADGSTHQIAAGWDRWVNDIQWVPNGRSLLLTADDQGHSPIFQLSLYNDK 347

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-------GRNETLINTPA 435
              L +  +      S   R+  ++ +      ++  +IDL        G    L+   +
Sbjct: 348 ITRLTDQGSFTNVVISHDSRT-AYALRSSYLYPAEPVAIDLTHTQDLEAGEFAPLLELRS 406

Query: 436 YASDPQ 441
            A  P 
Sbjct: 407 PAPRPA 412



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 60/174 (34%), Gaps = 16/174 (9%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           A+ ++ AH  +           GDF      VS    + +    + +    GA    L+P
Sbjct: 208 ANLQETAHDAAS---------NGDFLITEWLVS-EGRASMATGLMRIDLHSGAQEMLLSP 257

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                    + SP+   +AY  +         +  ++LMD       +    +   +   
Sbjct: 258 DGTFEYTMGKISPDSTHLAYGRWHRSTAETAPVFELWLMDLADGSTHQIAAGWDRWVNDI 317

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           ++  NG+  L++        I+ + L ++   RLT+      +   S DS    
Sbjct: 318 QWVPNGRSLLLTADDQGHSPIFQLSLYNDKITRLTDQGSF-TNVVISHDSRTAY 370



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 90/298 (30%), Gaps = 71/298 (23%)

Query: 218 RFSPNQQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+  K+          + +    ++ +D +     +R+    +    P+F++NG   
Sbjct: 24  ALSPDGTKLVTTLSTLSEDETKYESALWSLDPKAGAPARRLTFGENGESQPQFTANGDLM 83

Query: 273 LI---SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS-----QIVFESD--- 321
            +   S ++D   + + + +       + +      S S    ++     +    S    
Sbjct: 84  FVAKRSSEEDAKAEGWILPVAGGEARPVISHPAGVQSLSLCAHAADTVVLRTAAHSRAKD 143

Query: 322 -------REGK--------------------------EQLYV------MQSNGSDQKRIS 342
                  R G+                             YV        +  +    ++
Sbjct: 144 LEAEAKLRTGRKDKKVSAILHTGYPVRYWDHDLGPSTPHFYVGSLPALQDTGKTQLTDLT 203

Query: 343 QDKEASY--FDPVWSPQGDLIA---FTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQA 394
               A+        +  GD +             A G+M+ D   G+QE LL  D   + 
Sbjct: 204 PGIGANLQETAHDAASNGDFLITEWLVSEGRASMATGLMRIDLHSGAQEMLLSPDGTFEY 263

Query: 395 PT--WSPSGRSLIFSRKKDGDTGS----KLYSIDL-NGRNETLINT-PAYASDPQWVG 444
                SP    L + R       +    +L+ +DL +G    +      + +D QWV 
Sbjct: 264 TMGKISPDSTHLAYGRWHRSTAETAPVFELWLMDLADGSTHQIAAGWDRWVNDIQWVP 321


>gi|302894909|ref|XP_003046335.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256727262|gb|EEU40622.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 515

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 68/175 (38%), Gaps = 19/175 (10%)

Query: 208 PSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           P   + +   +FSP N  ++A  + D     R++  DT   +    +      +LA  +S
Sbjct: 143 PGHGEAILTAQFSPKNSNRLATGSGD--KTARIWDTDTGTPKYT--LSGHSGWVLAVAWS 198

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP-----DSSQIVFE 319
           ++G R   +   D+++ ++  D ++       LT       + ++ P     D +  +  
Sbjct: 199 ADGARLA-TGSMDKSIRLW--DPETGKAVGSPLTGHQKWVTNIAWEPYHLWRDGTPRIAS 255

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           + ++   +++V+       + +     +S     W   G+ + ++    +   + 
Sbjct: 256 ASKDATVRIWVVN--TGRTEHVLSGHRSSVSCVRW--GGEGLIYSASHDKTVRVW 306



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 54/149 (36%), Gaps = 18/149 (12%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           F  RI    E +VS     ++ + D   G           + +    FSP+   +A A +
Sbjct: 366 FQGRIA---ERLVSASDDFTMYLWDPAQGTKPVARMLGHQKQVNHVTFSPDGSLIASAGW 422

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRALISVQKDEAMDIYSV 287
           D+              R  K I   R  + AP     FS++  R L++  KD  + ++S+
Sbjct: 423 DN-------HTKIWSARDGKFINTLRGHV-APVYQCAFSAD-SRLLVTASKDTTLKVWSM 473

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQI 316
                    L        +  ++PD  ++
Sbjct: 474 -ASCKLAVDLPGHQDEVYAVDWAPDGKRV 501



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 51/340 (15%), Positives = 100/340 (29%), Gaps = 71/340 (20%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
            W++ GA+ L TG + K          RLWD +  K +       SP +  +    +++ 
Sbjct: 196 AWSADGAR-LATGSMDK--------SIRLWDPETGKAV------GSPLTGHQKW--VTNI 238

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            ++     + D   RI   S+          + V++  G     L+  R  +    R+  
Sbjct: 239 AWEPYHLWR-DGTPRIASASKDAT-----VRIWVVN-TGRTEHVLSGHRSSVSCV-RW-- 288

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN------------- 268
             + + Y+   D+    V + +         +      +     S++             
Sbjct: 289 GGEGLIYSASHDK---TVRVWNAEKGTLVHTLSAHAHWVNHLALSTDFVLRTGFYDHTPV 345

Query: 269 -----GKRA-------------------LISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                GKRA                   L+S   D  M ++     +    R+       
Sbjct: 346 PETEEGKRAKAKERFEKAAKFQGRIAERLVSASDDFTMYLWDPAQGTKPVARMLGHQKQV 405

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              ++SPD S I             +  +         +   A  +   +S    L+  T
Sbjct: 406 NHVTFSPDGSLIA---SAGWDNHTKIWSARDGKFINTLRGHVAPVYQCAFSADSRLLV-T 461

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                   +  M        L      + A  W+P G+ +
Sbjct: 462 ASKDTTLKVWSMASCKLAVDLPGHQDEVYAVDWAPDGKRV 501


>gi|302885581|ref|XP_003041682.1| hypothetical protein NECHADRAFT_72141 [Nectria haematococca mpVI
           77-13-4]
 gi|256722587|gb|EEU35969.1| hypothetical protein NECHADRAFT_72141 [Nectria haematococca mpVI
           77-13-4]
          Length = 953

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 53/146 (36%), Gaps = 9/146 (6%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           F+P +  +   +     E I ++  +    D + + +G     + A  F+ + +    ++
Sbjct: 715 FAPEESIIKTTFRKCIPEWITQLPQVQLDWDASLRSLGGETGWVSAIAFAPDDRHLASAL 774

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +   +     +L +    +        + S  +SPD S +   S  +G   + +     
Sbjct: 775 GRTVRLW----NLDTGKEAQRFEHPCDGVLSMVFSPDGSLLAASSPNQG--MILLWDPTT 828

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLI 361
            +    S +        V SP+GD I
Sbjct: 829 KNDTHGSNEHGGLIRHLVPSPRGDQI 854


>gi|225866337|ref|YP_002751715.1| tolB domain protein [Bacillus cereus 03BB102]
 gi|225786225|gb|ACO26442.1| tolB domain protein [Bacillus cereus 03BB102]
          Length = 410

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 85/248 (34%), Gaps = 51/248 (20%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY     +  L +Y +     +
Sbjct: 35  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSHDGEWLAYVKGKKQGSLELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K++  F S     ++S               +  + V+ ++   E ++  +      +
Sbjct: 86  DGKKVTPFHSEASNYQWSPTENIIAFIFT--GTLHTFKVEKKNADFENVSAGVGDY---A 140

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-------------------- 348
           + P+  + +  S+       +     G+    + +D   +                    
Sbjct: 141 WYPNGKKFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHDDFLAL 196

Query: 349 -YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWS 398
                 WSP    I+F       +S +   + +++ DGS+     ++L+     +   W+
Sbjct: 197 VASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK---WA 253

Query: 399 PSGRSLIF 406
           P+   L +
Sbjct: 254 PANNILAY 261



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 10/87 (11%)

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  IAF +       + + K DG +E+ L +   +  P WS  G  L + + K      +
Sbjct: 28  GVKIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSHDGEWLAYVKGKK-QGSLE 80

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           LY +  +G+  T  ++   AS+ QW  
Sbjct: 81  LYRLK-DGKKVTPFHS--EASNYQWSP 104


>gi|218262227|ref|ZP_03476766.1| hypothetical protein PRABACTJOHN_02440 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223517|gb|EEC96167.1| hypothetical protein PRABACTJOHN_02440 [Parabacteroides johnsonii
           DSM 18315]
          Length = 724

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/184 (13%), Positives = 64/184 (34%), Gaps = 33/184 (17%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS------V 276
           +  +   +Y   + +       +          F    +    SS G   L+        
Sbjct: 62  RNMIIKYSYRTGNPVDTLFNTGKARECT--FDKFDGYTI----SSTGHHILVWRDTEPIY 115

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           ++    ++Y  D++ N  + ++++    +  ++SPD   + + SD      +++ + +  
Sbjct: 116 RRSFKANVYDYDVRRNYVKPISDSKGKQMIPTFSPDGRMVAYVSD----NNIWIRKFDYD 171

Query: 337 DQKRISQDKEAS-----------------YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            + ++++D E +                      WSP  + +AF +F   +     M+  
Sbjct: 172 TEVQVTKDGELNKILNGITDWVYEEEFAVTNLMAWSPNSEQLAFVRFDESEVPEYSMQMF 231

Query: 380 GSQE 383
           G   
Sbjct: 232 GDGL 235



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/296 (13%), Positives = 80/296 (27%), Gaps = 55/296 (18%)

Query: 195 VMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRA 249
           V D D   N              P FSP+ + VAY +    +  +      +  T+    
Sbjct: 123 VYDYDVRRNYVKPISDSKGKQMIPTFSPDGRMVAYVSDNNIWIRKFDYDTEVQVTKDGEL 182

Query: 250 PKRIGNFRSMILA--------PRFSSNGKRALISVQKDEAMDIYSV-------------- 287
            K +      +            +S N ++       +  +  YS+              
Sbjct: 183 NKILNGITDWVYEEEFAVTNLMAWSPNSEQLAFVRFDESEVPEYSMQMFGDGLYPGYYNY 242

Query: 288 --DLQSNATERLTNTLF-----------INISA-SYSP-------DSSQIVFESDREGK- 325
                     ++T   +           + + A SY P       D    V   +R    
Sbjct: 243 KYPKAGEKNSKVTLHSYDVATKDTKELKVPVEADSYIPRIVFTNNDDQLAVMTLNRHQNV 302

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVW----SPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             +Y         + I +D+  +Y D  W        +  ++         I +    G 
Sbjct: 303 FNMYYANPKSGVFRLILRDENKAYVDSEWLNSIHFYANSFSYVNEQDGYAHIYLYSPTGV 362

Query: 382 QERLLVEDSNLQAPTWSPSG--RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +R + + +             +++ +   ++      +Y ID  G    L     
Sbjct: 363 MQRQVTKGNWDVTAFLGYDEATKTVYYESAEESPIRRAIYKIDAKGVKTKLSTQEG 418



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/178 (11%), Positives = 46/178 (25%), Gaps = 32/178 (17%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----------SDREGK 325
             ++ +  +   ++      ++TN           PD                 S R G 
Sbjct: 19  AAQNGSKRVDLKEITDGQFRQVTNIG----EMRSMPDGEHYTAMNDARNMIIKYSYRTGN 74

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKD 379
               +        +  + DK   Y     S  G  I   +          K  +      
Sbjct: 75  PVDTLFN--TGKARECTFDKFDGYT---ISSTGHHILVWRDTEPIYRRSFKANVYDYDVR 129

Query: 380 GSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            +  + + +       PT+SP GR + +         + ++    +   E  +     
Sbjct: 130 RNYVKPISDSKGKQMIPTFSPDGRMVAYVSD------NNIWIRKFDYDTEVQVTKDGE 181


>gi|261192968|ref|XP_002622890.1| chromosome segregation protein [Ajellomyces dermatitidis SLH14081]
 gi|239589025|gb|EEQ71668.1| chromosome segregation protein [Ajellomyces dermatitidis SLH14081]
 gi|239613608|gb|EEQ90595.1| chromosome segregation protein [Ajellomyces dermatitidis ER-3]
          Length = 849

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 49/250 (19%), Positives = 84/250 (33%), Gaps = 25/250 (10%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   +   F+  +    + K  L     D   +R   P RD  L     S +   VA A+
Sbjct: 62  GIVATNDSFIMGAEDGTVWKYELATGQMDKLLVRCALPVRDLSL-----SKDGDWVAVAS 116

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               D L V +++       K + +    +    F  +G+   +S   D  + IYS+D  
Sbjct: 117 ----DELVVKIVNIHDMTIVKYLRDQSKGVKHVNFDPSGRFIAVSGS-DGIIYIYSIDSP 171

Query: 291 --------SNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
                        RL T+    +  A + PD+    F +    ++   V   + + Q   
Sbjct: 172 QPELVKKIDGIIGRLETDHEATSR-AVWHPDAR--AFAAVEPTRDIAIVSTRDWTKQNVF 228

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                A      WSP G L+A    +G    I + +          +  N+    W P  
Sbjct: 229 PAGHNADITALAWSPNGALLA---SAGADRQILLWETKSQSILRRYDIPNVINLAWHPVD 285

Query: 402 RSLIFSRKKD 411
            +L F+    
Sbjct: 286 NTLSFTTSDG 295


>gi|229129635|ref|ZP_04258603.1| TolB domain protein [Bacillus cereus BDRD-Cer4]
 gi|228653752|gb|EEL09622.1| TolB domain protein [Bacillus cereus BDRD-Cer4]
          Length = 399

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 82/244 (33%), Gaps = 59/244 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG  I+     + + +  P++S + + +AY     + IL +Y +     +
Sbjct: 22  RHHNLWI-KVDGKEIQIT---KGEYITGPKWSYDGEWLAYVKGKKQSILELYRL-----K 72

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 + + D++        N  F N+SA 
Sbjct: 73  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLNTFDVEKK------NADFENVSAG 122

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD    +  S+       +     G+    + +D   +               
Sbjct: 123 VGDYAWYPDGKNFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 178

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNL 392
                      WSP    I+F       +S +   + +++ DGS      + LL      
Sbjct: 179 DFLALVASGFKWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNAQWFQ 238

Query: 393 QAPT 396
            AP+
Sbjct: 239 WAPS 242


>gi|134096923|ref|YP_001102584.1| peptide hydrolase [Saccharopolyspora erythraea NRRL 2338]
 gi|291006635|ref|ZP_06564608.1| peptide hydrolase [Saccharopolyspora erythraea NRRL 2338]
 gi|133909546|emb|CAL99658.1| peptide hydrolase [Saccharopolyspora erythraea NRRL 2338]
          Length = 609

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 59/177 (33%), Gaps = 2/177 (1%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATY 231
           ++  +L +S S        +L V+  DG+ +        + L    F+P    +     +
Sbjct: 173 WDETVLVISHSEHGDSRHPALRVLRVDGSEVAEKWDGPGKGLEALDFAPVTGDQRLLVLH 232

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           +      + + D   D   +   +    + A  +  +G   LI+        ++  D+ S
Sbjct: 233 ERRGREELLIWDVESDTETEITLDLPGEVSA-DWYPDGSALLIAHTHHARTTMHRYDIAS 291

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                L         A+  PD S     S       +  + + G D+  +S   E +
Sbjct: 292 GTLTDLPTPAGTVGGAAVRPDGSVEYSWSSAATPSLVRSLSAGGEDRVLLSPPGERA 348



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 50/313 (15%), Positives = 97/313 (30%), Gaps = 22/313 (7%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                ++  K F    A  R  A   +  +  S+     D   R L+VS    +      
Sbjct: 3   TYPAAKVPEKLFEDPAAEQRWRARFSAPRV--SLPDWARDAPQRSLYVSNVSGT----WE 56

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD--TRIDRAP 250
           +   DR+    R +T   +   F    S + + + +    D D    +++         P
Sbjct: 57  IYAWDRERETHRQVTDRPNG-TFHGTLSADGEHIWWFNDTDGDEFGSWVVQPFGSDSHEP 115

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              G            +  +   +S      + I          E +         ++ S
Sbjct: 116 ALPGTHPGYPSGLELGAKVRGLAMSTDDGVTVWIAR---DGGVPEVIYQHEQDGGLSALS 172

Query: 311 PDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP---QGDLIAFT 364
            D + +V      G      L V++ +GS+                ++P      L+   
Sbjct: 173 WDETVLVISHSEHGDSRHPALRVLRVDGSEVAEKWDGPGKGLEALDFAPVTGDQRLLVLH 232

Query: 365 KFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +  G E+  I  ++ D   E + ++     +  W P G +L+ +      T    Y  D+
Sbjct: 233 ERRGREELLIWDVESDTETE-ITLDLPGEVSADWYPDGSALLIAHTHHARTTMHRY--DI 289

Query: 424 NGRNETLINTPAY 436
                T + TPA 
Sbjct: 290 ASGTLTDLPTPAG 302



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/250 (10%), Positives = 74/250 (29%), Gaps = 18/250 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A  R+        +  P ++ +  + +    +      +Y  D   +   +++ +  +  
Sbjct: 19  AEQRWRARFSAPRVSLPDWARDAPQRSLYVSNVSGTWEIYAWDRERETH-RQVTDRPNGT 77

Query: 261 LAPRFSSNGKRALISVQKDE----AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                S++G+        D     +  +      S+                       +
Sbjct: 78  FHGTLSADGEHIWWFNDTDGDEFGSWVVQPFGSDSHEPALPGTHPGYPSGLELGAKVRGL 137

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---I 373
              +D    + + V  +       +    E        S    ++  +           +
Sbjct: 138 AMSTD----DGVTVWIARDGGVPEVIYQHEQDGGLSALSWDETVLVISHSEHGDSRHPAL 193

Query: 374 GVMKKDGSQERLLVEDSN--LQAPTWSP---SGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            V++ DGS+     +     L+A  ++P     + L+   ++ G     ++ ++ +   E
Sbjct: 194 RVLRVDGSEVAEKWDGPGKGLEALDFAPVTGD-QRLLVLHERRGREELLIWDVESDTETE 252

Query: 429 TLINTPAYAS 438
             ++ P   S
Sbjct: 253 ITLDLPGEVS 262


>gi|329962730|ref|ZP_08300653.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           fluxus YIT 12057]
 gi|328529564|gb|EGF56467.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           fluxus YIT 12057]
          Length = 759

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/266 (14%), Positives = 82/266 (30%), Gaps = 58/266 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--------------- 263
           +SP    +A+   ++  +    L+D     A      +    +A                
Sbjct: 202 WSPAGNLLAFYRMNESMVTSYPLVDITARTAVVDPIRYPMAGMASHQVQVGIYNPTTQKT 261

Query: 264 ----------------RFSSNGKRA-LISVQKDEAMD-IYSVDLQSNATERLTNTLFIN- 304
                            ++ +GK   LI + +D+    +   + ++   +R+      + 
Sbjct: 262 IYLNTGDPTDRYFTNIAWAPDGKSLYLIELNRDQNHSRLCQYNAETGELQRVLIEEKHDK 321

Query: 305 -ISAS----YSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +       + P D ++ +++S R+G   LY+           S   +    + +W    
Sbjct: 322 YVEPQHPILFLPWDETKFIYQSQRDGYNHLYLYDLAKLSAAHRSASPDTEEAEKIW---- 377

Query: 359 DLIAFTKFSGEKFAI----GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             I   K +G    I    GV    G      +   N +        + +IF+  K+   
Sbjct: 378 KQI---KKAGSGKDIKEAVGVQLTQGDWLVQEILGFNEKK-------KEIIFTATKESPL 427

Query: 415 GSKLYSIDLNGRNETLINTPAYASDP 440
            S  Y ++ N    T +        P
Sbjct: 428 QSNTYKVNANNGKITAVGNSEGVHSP 453


>gi|329957639|ref|ZP_08298114.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           clarus YIT 12056]
 gi|328522516|gb|EGF49625.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           clarus YIT 12056]
          Length = 738

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 61/176 (34%), Gaps = 40/176 (22%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++ ++   ++     + V          P +  +  S      F+ +G + LI+ +    
Sbjct: 59  DKTQIIKYSFKTGKPVEVLFDAATARECPFKKFDSYS------FAPDGSKLLIATETTPI 112

Query: 282 MD--------IYSV--DLQSN---ATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                     IYS+  +L        E+L++         +SPD  Q+ F  D       
Sbjct: 113 YRHSYTAVHYIYSLKRNLDGKINNVVEKLSDG-GPQQVPVFSPDGYQVAFVRD---NNIF 168

Query: 329 YVMQSNGSDQKRISQDKEAS---YFDPVW--------------SPQGDLIAFTKFS 367
            V    G+ + ++++D + +      P W              SP   ++AF +F 
Sbjct: 169 LVKLLYGNSESQVTEDGKRNEVLNGIPDWVYEEEFSFNRALEFSPDSKMLAFIRFD 224



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 55/168 (32%), Gaps = 37/168 (22%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYL-----------MDTRIDRAPKRIGNFRSMILAPRFS 266
            F+P+  K+  AT         Y            +D +I+   +++ +     + P FS
Sbjct: 95  SFAPDGSKLLIATETTPIYRHSYTAVHYIYSLKRNLDGKINNVVEKLSDGGPQQV-PVFS 153

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------------------FINISAS 308
            +G +      +D  + +  + L  N+  ++T                       N +  
Sbjct: 154 PDGYQVAFV--RDNNIFLVKL-LYGNSESQVTEDGKRNEVLNGIPDWVYEEEFSFNRALE 210

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS----QDKEASYFDP 352
           +SPDS  + F    E +   Y       +   I+       E +Y  P
Sbjct: 211 FSPDSKMLAFIRFDEREVPSYTFPVFAGEAPHITPYEKYPGEYTYKYP 258



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 41/145 (28%), Gaps = 30/145 (20%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDP-------VWSPQGDLI--------AFTKFSGE 369
           K Q+            +  D   +   P        ++P G  +         +      
Sbjct: 60  KTQIIKYSFKTGKPVEVLFDAATARECPFKKFDSYSFAPDGSKLLIATETTPIYRHSYTA 119

Query: 370 KFAIGVM--KKDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY----- 419
              I  +    DG        L +    Q P +SP G  + F R  +      LY     
Sbjct: 120 VHYIYSLKRNLDGKINNVVEKLSDGGPQQVPVFSPDGYQVAFVRDNNIFLVKLLYGNSES 179

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+   ++N       P WV 
Sbjct: 180 QVTEDGKRNEVLN-----GIPDWVY 199



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 44/119 (36%), Gaps = 2/119 (1%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F S++ G   LY     G+  K+++           + P+     ++          + K
Sbjct: 357 FVSEKSGYNHLYWYSIGGNLIKQVTSGPYEIQDFLGYDPEDGSFYYSSNEESPLRSAIYK 416

Query: 378 KDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            D   +++ L   +   +  +S + +  + +R    DT + +   D  G+  T +   +
Sbjct: 417 IDRKGKKIKLSSQAGTNSAQFSTNMKYFM-NRYSSSDTPTVITLNDNTGKALTTLVDNS 474


>gi|224118700|ref|XP_002317885.1| predicted protein [Populus trichocarpa]
 gi|222858558|gb|EEE96105.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 12/112 (10%)

Query: 198 RDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            +G   ++ +  RD   F    RFSP+  K    + D + I    L D +      +I +
Sbjct: 173 YEGPPFKFKSSHRDHSNFVNCVRFSPDGSKFISVSSDKKGI----LFDGKTGEKIGQISS 228

Query: 256 ---FRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLF 302
               +  I A  +S +GK+ L +V  D++  ++ +  D     T+ LT++  
Sbjct: 229 EDGHKGSIYAVSWSPDGKQVL-TVSADKSAKVWEICDDGSGKLTKTLTSSGS 279



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/272 (16%), Positives = 90/272 (33%), Gaps = 65/272 (23%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            P   K+ Y      +   + +++          G         R+S NG+    S    
Sbjct: 25  HPKTNKILYT-----NNRSILILNLDNPLDVSVYGEHAYQATVARYSPNGEWIA-SADVS 78

Query: 280 EAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQS-- 333
             + I+    D       ++      ++   +SPD  +IV   D +GK   + ++  S  
Sbjct: 79  GTVRIWGAYNDHVLKKEFKVLTGRIDDLQ--WSPDGLRIVASGDGKGKSLVRAFMWDSGT 136

Query: 334 -----NGSDQKRIS----------------------------------QDKEASYFDPVW 354
                +G  ++ +S                                  +D         +
Sbjct: 137 NVGEFDGHSRRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPFKFKSSHRDHSNFVNCVRF 196

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAPTWSPSGRSLIFSRKK 410
           SP G    F   S +K  I    K G +   +  +     ++ A +WSP G+ ++     
Sbjct: 197 SPDGSK--FISVSSDKKGILFDGKTGEKIGQISSEDGHKGSIYAVSWSPDGKQVL---TV 251

Query: 411 DGDTGSKLYSI--DLNGR-NETLINTPAYASD 439
             D  +K++ I  D +G+  +TL ++ +   D
Sbjct: 252 SADKSAKVWEICDDGSGKLTKTLTSSGSGGVD 283



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 62/179 (34%), Gaps = 15/179 (8%)

Query: 219 FSPNQQKVAYATYDDEDIL-RVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALI 274
           +SP+  ++  +       L R ++ D+  +     +G F      +L+  F       ++
Sbjct: 108 WSPDGLRIVASGDGKGKSLVRAFMWDSGTN-----VGEFDGHSRRVLSCAFKPTRPFRIV 162

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +  +D  ++ Y        +    ++ F+N    +SPD S+  F S    K+ +      
Sbjct: 163 TCGEDFLVNFYEGPPFKFKSSHRDHSNFVNCV-RFSPDGSK--FISVSSDKKGILFDGKT 219

Query: 335 GSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM-KKDGSQERLLVEDS 390
           G    +IS     + S +   WSP G  +             +     G   + L    
Sbjct: 220 GEKIGQISSEDGHKGSIYAVSWSPDGKQVLTVSADKSAKVWEICDDGSGKLTKTLTSSG 278



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 30/233 (12%), Positives = 77/233 (33%), Gaps = 16/233 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTP-------SRDQILFEPRFSPNQQKVAYATYD 232
           V+   V   +  ++     DG  I+++          R +       +  ++++  + +D
Sbjct: 327 VTSLSVLKNVPKTILSSSYDGLIIKWIQGIGYSSKLQRKENTQIKCLAAAEEEIVTSGFD 386

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           ++      L D   D     +GN    I             +   +   +      L+  
Sbjct: 387 NKIWRVHLLDDQCGDADSIDVGNQPKDISLALLCP---ELALVTIESGVVM-----LRGT 438

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                 N  F   +++ +PD S+       +GK  +Y +  +   ++ + +    +    
Sbjct: 439 KVVSTINLGFAVTASAIAPDGSE-AIIGGLDGKLHIYSVTGDTLTEEAVLEKHRGAISVI 497

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +SP   + A    + E      + ++   + +L   + +    WSP    + 
Sbjct: 498 RYSPDDSMFASGDLNREAVVWDRVSREVKLKNMLYHTARINCLAWSPDSSMVA 550


>gi|50286763|ref|XP_445811.1| hypothetical protein [Candida glabrata CBS 138]
 gi|74691059|sp|Q6FVD3|HIR1_CANGA RecName: Full=Protein HIR1
 gi|49525117|emb|CAG58730.1| unnamed protein product [Candida glabrata]
          Length = 840

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 88/246 (35%), Gaps = 45/246 (18%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLM----------DTRIDRAPKRIGNFR 257
           SRD  ++    SP+ ++VA    D +  I  V  +          D    R    +    
Sbjct: 15  SRDYEIYTVDVSPDGKRVATGGLDGKIRIWSVDALVSAAAGESGVDRDTHRPLASMSRHT 74

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--SNA------------TERLTNTLFI 303
             +   +FS +G     S   D  + I+++D +    +             +RL      
Sbjct: 75  GSVTCVKFSPDGNYLA-SGSDDRILLIWAMDEENHGGSFGSEGEKEHWTVRKRLVAHDND 133

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLI 361
                ++PDSS +V      G ++  ++  NG + +R+ +    ++     ++ P     
Sbjct: 134 IQDICWAPDSSILVTV----GLDRSVIVW-NGLNFERLKRFDVHQSLVKGVIFDPANKYF 188

Query: 362 AFTKFSGEKFAIGVMKKDG----SQERLLVE-------DSNLQAPTWSPSGRSLIFSRKK 410
           A T        +    K G    + E+++VE        +  +  +WSP G+ +      
Sbjct: 189 A-TASDDRTMRVFRYHKTGEVSFTIEQVIVEPFIASPLTTYFRRLSWSPDGQHIAVPNAT 247

Query: 411 DGDTGS 416
           +G   S
Sbjct: 248 NGPVSS 253



 Score = 43.1 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 80/229 (34%), Gaps = 30/229 (13%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR------- 248
           +DRD              +   +FSP+   +A  + D   IL ++ MD            
Sbjct: 59  VDRDTHRPLASMSRHTGSVTCVKFSPDGNYLASGSDD--RILLIWAMDEENHGGSFGSEG 116

Query: 249 ------APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY---------SVDLQSNA 293
                   KR+    + I    ++ +    L++V  D ++ ++           D+  + 
Sbjct: 117 EKEHWTVRKRLVAHDNDIQDICWAPD-SSILVTVGLDRSVIVWNGLNFERLKRFDVHQSL 175

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            + +         A+ S D +  VF   + G+    + Q     +  I+      +    
Sbjct: 176 VKGVIFDPANKYFATASDDRTMRVFRYHKTGEVSFTIEQVI--VEPFIASPLTTYFRRLS 233

Query: 354 WSPQGDLIAF-TKFSGEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSP 399
           WSP G  IA     +G   ++ ++ +    S   L+  D+  +   ++P
Sbjct: 234 WSPDGQHIAVPNATNGPVSSVAIINRGTWDSSISLIGHDAPTEVARFNP 282


>gi|307945320|ref|ZP_07660656.1| WD-containing repeat protein [Roseibium sp. TrichSKD4]
 gi|307771193|gb|EFO30418.1| WD-containing repeat protein [Roseibium sp. TrichSKD4]
          Length = 457

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 100/293 (34%), Gaps = 21/293 (7%)

Query: 135 DRKQIIGKKFFSSPASWR-KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
             K+++   F  S   W    A   S +  + I  E    + R L      V+    + L
Sbjct: 42  SGKRLLSTSFDYSVLVWSEDEAGEASAEPLRLIGHEAAVNDGRFL-PGNRAVTVGDDSDL 100

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            + D   A + +      + +     S N +  A A++  E+  R+Y ++    +    +
Sbjct: 101 ILWDLTTAELLHRFDGFGEKVLSVDVSANGRFAAVASW--ENQARIYDLEASPSKLLHVL 158

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTN-TLFINISASYSP 311
              R  + +  FS +G +   +   D  +  +  D+++ A    + N    +N+     P
Sbjct: 159 DQHRGNVNSVAFSKDGTQL-FTASYDGGIRQF--DVETGAFLREIVNLGWGVNV-LKVLP 214

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D + + F    +GK    V+     ++ ++             S  G   A     G   
Sbjct: 215 DGTSLFFGVT-DGKTG--VLDIWTGEEIKVLPPHTRPVLSLAVSLDGKRAA---SGGGDG 268

Query: 372 AIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            I V      +     E+    +   +++  G  L ++     D    L+ + 
Sbjct: 269 LIRVFDAKTFELLEEFENPYGLVWGLSFNADGNRLFYT---GLDDEIHLWDVS 318


>gi|307329391|ref|ZP_07608553.1| serine/threonine protein kinase with WD40 repeats [Streptomyces
           violaceusniger Tu 4113]
 gi|306884925|gb|EFN15949.1| serine/threonine protein kinase with WD40 repeats [Streptomyces
           violaceusniger Tu 4113]
          Length = 1141

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 83/233 (35%), Gaps = 21/233 (9%)

Query: 206 LTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           L    + + + P RF+P+ +      +D      + L  T        +   R+ +L   
Sbjct: 456 LLARHEVMGYLPIRFTPDGRLALSGHWDG----VLRLWSTATCAQRLAVEGHRTQVLGVD 511

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIVFESDR 322
            + +G    +S  +D  +  +  DL +    R+  +           S D    V++   
Sbjct: 512 LTPDGSY-ALSTSRDGTVQFW--DLGAGRCTRVIRSAARATGCPVRLSADGRIGVWQ-GV 567

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +G+ Q++  ++        +  ++ +     +  S  G  +   +  G +    +     
Sbjct: 568 DGRVQVWEPRTGTPRWSLGAALEDGALDGSQYEVSADGRHVLTAEEDGAR----LWSVAD 623

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            + R+L   S   A  +SP G  +  +     D   +L+ +  +GR    + T
Sbjct: 624 GRCRVLAAGSATHALCFSPDGWMVAVA---GEDRVIRLWDVR-DGRQAGALRT 672



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 50/167 (29%), Gaps = 13/167 (7%)

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
            V + D       + + +    +     S +G+  L    K  A+  +   L      RLT
Sbjct: 872  VRMWDLDSGACTRALDDHPGRVGGVALSDDGRHVLCEGTKPLAIIRWR--LADGECRRLT 929

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQ 357
                +  +  ++ D     F S   G   L     +       I+++   +      S  
Sbjct: 930  PDWDMRRTIRFTGDGRYAWFGS---GDGVLRRWDLDDDRCIATITRNGPVNVIST--SAD 984

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSN-LQAPTWSPSGR 402
            G L A    +G    + +   D     R        + +   S  GR
Sbjct: 985  GRLAAVGDSNG---VVRLRDLDTGACLRTWTGPREPILSACLSADGR 1028



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 65/233 (27%), Gaps = 17/233 (7%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VSG    ++ + D D              +     S + + V     +    L +     
Sbjct: 864  VSGQSDGTVRMWDLDSGACTRALDDHPGRVGGVALSDDGRHVL---CEGTKPLAIIRWRL 920

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                  +R+     M    RF+ +G+ A      D  +  + +D        +T    +N
Sbjct: 921  ADGEC-RRLTPDWDMRRTIRFTGDGRYAWF-GSGDGVLRRWDLD-DDRCIATITRNGPVN 977

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +  S S D  ++    D  G  +L     +     R              S  G L   T
Sbjct: 978  V-ISTSADG-RLAAVGDSNGVVRLR--DLDTGACLRTWTGPREPILSACLSADGRLAMST 1033

Query: 365  KF------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                      E   +       S       +  + A  ++P  R   FS   D
Sbjct: 1034 HQVMSSGAKDEPIRLWDAGAGRSVREFAGHEGWVSAVRFTPDARF-AFSAGHD 1085


>gi|118479519|ref|YP_896670.1| TolB domain-containing protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|196044781|ref|ZP_03112015.1| tolB domain protein [Bacillus cereus 03BB108]
 gi|118418744|gb|ABK87163.1| possible tolB domain protein [Bacillus thuringiensis str. Al Hakam]
 gi|196024269|gb|EDX62942.1| tolB domain protein [Bacillus cereus 03BB108]
          Length = 410

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 85/248 (34%), Gaps = 51/248 (20%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY     +  L +Y +     +
Sbjct: 35  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSHDGEWLAYVKGKKQGSLELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K++  F S     ++S               +  + V+ ++   E ++  +      +
Sbjct: 86  DGKKVTPFHSEASNYQWSPTENIIAFIFT--GTLHTFKVEKKNADFENVSAGVGDY---A 140

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-------------------- 348
           + P+  + +  S+       +     G+    + +D   +                    
Sbjct: 141 WYPNGKKFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHDDFLAL 196

Query: 349 -YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWS 398
                 WSP    I+F       +S +   + +++ DGS+     ++L+     +   W+
Sbjct: 197 VASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK---WA 253

Query: 399 PSGRSLIF 406
           P+   L +
Sbjct: 254 PANNILAY 261



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 10/87 (11%)

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  IAF +       + + K DG +E+ L +   +  P WS  G  L + + K      +
Sbjct: 28  GVKIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSHDGEWLAYVKGKK-QGSLE 80

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           LY +  +G+  T  ++   AS+ QW  
Sbjct: 81  LYRLK-DGKKVTPFHS--EASNYQWSP 104


>gi|30022431|ref|NP_834062.1| hypothetical protein BC4350 [Bacillus cereus ATCC 14579]
 gi|29897989|gb|AAP11263.1| hypothetical Exported Protein [Bacillus cereus ATCC 14579]
          Length = 412

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 82/244 (33%), Gaps = 59/244 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG  I+     + + +  P++S + + +AY     + IL +Y +     +
Sbjct: 35  RHHNLWI-KVDGKEIQIT---KGEYITGPKWSYDGEWLAYVKGKKQSILELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 + + D++        N  F N+SA 
Sbjct: 86  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLNTFDVEKK------NADFENVSAG 135

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD    +  S+       +     G+    + +D   +               
Sbjct: 136 VGDYAWYPDGKNFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 191

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNL 392
                      WSP    I+F       +S +   + +++ DGS      + LL      
Sbjct: 192 DFLALVASGFKWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNAQWFQ 251

Query: 393 QAPT 396
            AP+
Sbjct: 252 WAPS 255


>gi|158336083|ref|YP_001517257.1| peptide ABC transporter permease [Acaryochloris marina MBIC11017]
 gi|158306324|gb|ABW27941.1| peptide ABC transporter, permease protein [Acaryochloris marina
           MBIC11017]
          Length = 625

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 79/214 (36%), Gaps = 19/214 (8%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N++ + D  G  ++ L   +  I     FS + + +A  + D      + L         
Sbjct: 86  NTVALWDDQGTVLKTLEGHQGAITAL-AFSADGELIASGSADQ----TIKLWKAD-GTLV 139

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           K +   +  + +  FSS+GK    S  +D  + ++    +    + LT         +YS
Sbjct: 140 KTLEGHQGAVTSLAFSSDGKTLA-SGSEDRTVRLWK--TEGGLLQTLTGHTGSISLLAYS 196

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-- 368
           PD S +       G + + + +++G+ Q+ ++   + +     ++   + +     +   
Sbjct: 197 PDGSLLA---SGGGDKTVRLWKTSGTLQQTLTH--KGAITALQFNQNSEELVLNTIANHQ 251

Query: 369 --EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
             +++ +            L     + A  +SP 
Sbjct: 252 TWQQWNLEGKSLKTEDLNQLHSQP-ITAAAFSPD 284



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 14/155 (9%)

Query: 292 NATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                +T     +I+A +  PD SQI+      G+     +  +     +  +  + +  
Sbjct: 55  GDRSAVTTFTAKDITAVAIKPDGSQIL-----TGEANTVALWDDQGTVLKTLEGHQGAIT 109

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRK 409
              +S  G+LIA          I + K DG+  + L      + +  +S  G++L     
Sbjct: 110 ALAFSADGELIASGSADQT---IKLWKADGTLVKTLEGHQGAVTSLAFSSDGKTLA---S 163

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              D   +L+  +  G  +TL       S   +  
Sbjct: 164 GSEDRTVRLWKTEG-GLLQTLTGHTGSISLLAYSP 197


>gi|118362041|ref|XP_001014248.1| conserved hypothetical protein [Tetrahymena thermophila]
 gi|89296015|gb|EAR94003.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
          Length = 2404

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 86/237 (36%), Gaps = 10/237 (4%)

Query: 186  SGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +G    +  + + + G           Q +    FS + + +A ++ D     +V+ +  
Sbjct: 2018 TGSKDTTCKIWNIEKGFEFISSIQGHTQAITSVTFSKDCKYLATSSED--KTYQVWNIQ- 2074

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +      +I    S I +  FS + K    +  +D    +Y+V+        +    +I 
Sbjct: 2075 KGYELISQIQAHNSTITSVAFSEDSKYLA-TGSEDNTCKVYNVENGFELISTIKGHSWIV 2133

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++SPDS  ++     +   +++ ++ +    K I            +S  G  +A  
Sbjct: 2134 SSVAFSPDSQYLI-TGSYDSTFKIWNVKKDFKQYKSIDALINY-ITSVAFSSDGKYLATG 2191

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                      V K+      +   D  +++  +SP G+ L        D   K++++
Sbjct: 2192 SEDNTCKIWNVSKQFKLMHTIKEHDLLIKSVAFSPDGKYLATGSY---DKTCKIWNV 2245



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 92/259 (35%), Gaps = 27/259 (10%)

Query: 181  SESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            S+ + +G   N+  V +  +G  +         I+    FSP+ Q +   +YD     ++
Sbjct: 2099 SKYLATGSEDNTCKVYNVENGFELISTIKGHSWIVSSVAFSPDSQYLITGSYD--STFKI 2156

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + +     +  K I    + I +  FSS+GK    +  +D    I++V  Q      +  
Sbjct: 2157 WNVKKDFKQY-KSIDALINYITSVAFSSDGKYLA-TGSEDNTCKIWNVSKQFKLMHTIKE 2214

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               +  S ++SPD   +      +   +++ +Q N      I Q          +S    
Sbjct: 2215 HDLLIKSVAFSPDGKYLA-TGSYDKTCKIWNVQKNFELVNTI-QGHRLIVTSVAFSADSK 2272

Query: 360  LIAFTKFSGE--------KFAIGVMKKDGSQE---------RLLVEDSNLQAPTWSPSGR 402
             +A   +           +F +        Q+         ++  E     +  +S  G+
Sbjct: 2273 YLATCSYDSTCKIWSIEQQFQLINQMASTQQQAQRGFEILSKIQGEIQGATSVAFSEDGK 2332

Query: 403  SLIFSRKKDGDTGSKLYSI 421
             L+   +   D   K+++I
Sbjct: 2333 YLVTGSE---DKVFKIWNI 2348



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 71/230 (30%), Gaps = 25/230 (10%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G  + +      + +    FS + +  A ++ D+     +     +  +        R  
Sbjct: 1689 GFELIHTIEGHLETINSVSFSNDGKYFATSSIDNN---CIVWNVEKEFQLKHTFQGHRGW 1745

Query: 260  ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT----NTLFINISASYSPDSSQ 315
            I +  FS++GK    +   D+   ++ +         L     N      + ++S +   
Sbjct: 1746 ITSVSFSADGKHFA-TSSMDKTCKLWKI----GEKIELIHVFNNYEQNITTITFSTNGKY 1800

Query: 316  IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S         +     G +     Q          +S     +A        F I 
Sbjct: 1801 LAIGSS---DSTCKIWNIEKGFNLISTIQGDTFEITSLAFSSDDKYLAM-SLEDGTFKI- 1855

Query: 375  VMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +  D +   +      +  + +  +S +G+   +      D+  K++S+
Sbjct: 1856 -LSPDNAFNLINTIKGHNQQINSVAFSANGK---YMATGSVDSTCKIWSV 1901



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 63/198 (31%), Gaps = 16/198 (8%)

Query: 238  RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            ++ + +       K I +    +    FS++GK   +S   +   +    D+Q    E +
Sbjct: 1596 QIKIYNLPSLSLEKTIEDSSCNLSISSFSADGKYLALSYDYN---NCQIFDIQ-KGFEVI 1651

Query: 298  TNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVW 354
                      S ++S DS  +   SD        +     G +     +    +     +
Sbjct: 1652 NQIQGDQTASSITFSADSQYLAIGSD---NCFCKIFNVKKGFELIHTIEGHLETINSVSF 1708

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            S  G   A +          V K+   +         + + ++S  G+    S     D 
Sbjct: 1709 SNDGKYFATSSIDNNCIVWNVEKEFQLKHTFQGHRGWITSVSFSADGKHFATSSM---DK 1765

Query: 415  GSKLYSIDLNGRNETLIN 432
              KL+ I   G    LI+
Sbjct: 1766 TCKLWKI---GEKIELIH 1780


>gi|18542932|gb|AAK00422.2| Putative notchless protein homolog [Oryza sativa Japonica Group]
          Length = 447

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 64/155 (41%), Gaps = 13/155 (8%)

Query: 182 ESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    ++ + +       +       +++    FSP+ Q +A A++D      V 
Sbjct: 304 ERLVSGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDK----SVK 359

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTN 299
           L +    +         + +    +S++  R L+S  KD  + ++  D+++   ++ L  
Sbjct: 360 LWNGITGKFVAAFRGHVADVYQISWSAD-SRLLLSGSKDSTLKVW--DIRTRKLKQDLPG 416

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                 +  +SPD  ++       GK+++  +  N
Sbjct: 417 HADEVYAVDWSPDGEKVA----SGGKDRVLKLWMN 447



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 52/173 (30%), Gaps = 19/173 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + +    FSP+ + +A  + D      V   D             ++ +L   +S +
Sbjct: 80  GHTEAVLAVSFSPDGRCLASGSGDT----TVRFWDLSTQTPLFTCKGHKNWVLCIAWSPD 135

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP-----DSSQIVFESD 321
           G   + S  K   + ++  D ++       LT       + S+ P        + V  S 
Sbjct: 136 GNHLV-SGSKSGELILW--DPKTGKQLGTPLTGHRKWITAVSWEPVHLQSPCRRFVSTS- 191

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++G  +++                  S     W   G  + +T        + 
Sbjct: 192 KDGDARIW--DMTTRKCVIALTGHTNSVTCVKWGGDG--LIYTGSEDCSIKVW 240



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 49/132 (37%), Gaps = 6/132 (4%)

Query: 232 DDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L +  I + PK R+   + ++    FS +G+    S   D+++ +++  + 
Sbjct: 308 SGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLA-SASFDKSVKLWN-GIT 365

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                     +      S+S DS  ++  S       L V        K+         +
Sbjct: 366 GKFVAAFRGHVADVYQISWSADSRLLLSGSK---DSTLKVWDIRTRKLKQDLPGHADEVY 422

Query: 351 DPVWSPQGDLIA 362
              WSP G+ +A
Sbjct: 423 AVDWSPDGEKVA 434



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 43/150 (28%), Gaps = 11/150 (7%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++   +      R+T    +     +SPD   +   S     + + +  
Sbjct: 306 LVSGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASF---DKSVKLWN 362

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +   A  +   WS    L+           + V      + +  +     
Sbjct: 363 GITGKFVAAFRGHVADVYQISWSADSRLLLSGSKDST---LKVWDIRTRKLKQDLPGHAD 419

Query: 393 QAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
           +     WSP G  +        D   KL+ 
Sbjct: 420 EVYAVDWSPDGEKVA---SGGKDRVLKLWM 446



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 79/260 (30%), Gaps = 42/260 (16%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+   +   +   +    +      
Sbjct: 99  SGSGDTTVRFWDLSTQTPLFTCKGHKNWVLCIAWSPDGNHLVSGS---KSGELILWDPKT 155

Query: 246 IDRAPKRIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQ------SNA 293
             +    +   R  I A  +      S    R  +S  KD    I+ +  +      +  
Sbjct: 156 GKQLGTPLTGHRKWITAVSWEPVHLQSP--CRRFVSTSKDGDARIWDMTTRKCVIALTGH 213

Query: 294 TERLTNTLFINISASY--SPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKE 346
           T  +T   +      Y  S D S  V+E+ +       +   + + S     + + +   
Sbjct: 214 TNSVTCVKWGGDGLIYTGSEDCSIKVWETSQGKLVKTLQGHGHWVNSLALSTEYVLRTGA 273

Query: 347 ASYFDPVWSPQGDL----IA-FTKFSGE----------KFAIGVMKKDGSQE---RLLVE 388
             +    +S   ++    +A + K  G            F + + +   S++   R+   
Sbjct: 274 YDHTGKTYSTAEEMKEAALARYKKMRGNAPERLVSGSDDFTMFLWEPTISKQPKARMTGH 333

Query: 389 DSNLQAPTWSPSGRSLIFSR 408
              +    +SP G+ L  + 
Sbjct: 334 QKLVNHVYFSPDGQWLASAS 353


>gi|73956671|ref|XP_536722.2| PREDICTED: similar to WD-repeat protein 8 [Canis familiaris]
          Length = 460

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 83/228 (36%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D +   I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDVNTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYKRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             RI    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --RIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACQQGITF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + V   +     R    +        W+P G ++A    +  
Sbjct: 142 TRDGRYMALAERRDCKDHVSVFVCSDWQLLRHFDTETQDLAGIEWAPNGCVLA-VWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKD 411
           ++ + +   DG   RLL           +++  WSPS + L       
Sbjct: 201 EYKVLLYSLDG---RLLSAYCAYEWSLGVKSVAWSPSSQFLAVGSYDG 245



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 50/148 (33%), Gaps = 9/148 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK     VQ      +   D+ +    +L   L       +S DS  I+    + G
Sbjct: 16  FSPDGKYLASCVQ----YRLVVRDVNTLQILQLYTCLDQIQHIEWSADSLFILCAMYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++      +    +  A      WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQPEWHCR--IDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSVS 127

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKD 411
            +       Q  T++  GR +  + ++D
Sbjct: 128 YIKYPKACQQGITFTRDGRYMALAERRD 155


>gi|330443419|ref|NP_009545.2| Hir1p [Saccharomyces cerevisiae S288c]
 gi|329136713|tpg|DAA07112.2| TPA: Hir1p [Saccharomyces cerevisiae S288c]
          Length = 840

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 66/190 (34%), Gaps = 33/190 (17%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---------------TERLT 298
                 I   +FS +GK    S   D  + I+++D + ++                +RL 
Sbjct: 76  SRHTGSITCVKFSPDGKYLA-SGSDDRILLIWALDEEQSSQPAFGSEHEREHWTVRKRLV 134

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQ 357
                     ++PDSS +V      G ++  ++ +  + +K    D   S    V + P 
Sbjct: 135 AHDNDIQDICWAPDSSILVTV----GLDRSVIVWNGSTFEKLKRFDVHQSLVKGVVFDPA 190

Query: 358 GDLIAFTKFSGEKFAIGVMKKDG----SQERLLVE-------DSNLQAPTWSPSGRSLIF 406
               A T        I    K G    + E ++ E        +  + P+WSP G+ +  
Sbjct: 191 NKYFATTS-DDRTMKIFRYHKTGDISFTIEHIITEPFKESPLTTYFRRPSWSPDGQHIAV 249

Query: 407 SRKKDGDTGS 416
               +G   S
Sbjct: 250 PNATNGPVSS 259



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 76/209 (36%), Gaps = 33/209 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--------------KRIGNFRSMILAP 263
           +FSP+ + +A  + D   IL ++ +D      P              KR+    + I   
Sbjct: 86  KFSPDGKYLASGSDD--RILLIWALDEEQSSQPAFGSEHEREHWTVRKRLVAHDNDIQDI 143

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDR 322
            ++ +    L++V  D ++ ++  +  +    +R      +     + P +      SD 
Sbjct: 144 CWAPD-SSILVTVGLDRSVIVW--NGSTFEKLKRFDVHQSLVKGVVFDPANKYFATTSD- 199

Query: 323 EGKEQLYVMQSNGS---DQKRISQDKE------ASYFDPVWSPQGDLIAF-TKFSGEKFA 372
           +   +++     G      + I  +          +  P WSP G  IA     +G   +
Sbjct: 200 DRTMKIFRYHKTGDISFTIEHIITEPFKESPLTTYFRRPSWSPDGQHIAVPNATNGPVSS 259

Query: 373 IGVMKKDG--SQERLLVEDSNLQAPTWSP 399
           + ++ +    +   L+  D+  +   ++P
Sbjct: 260 VAIVNRGTWDTNVSLIGHDAPTEVARFNP 288


>gi|259144839|emb|CAY77778.1| Hir1p [Saccharomyces cerevisiae EC1118]
          Length = 839

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 66/190 (34%), Gaps = 33/190 (17%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---------------TERLT 298
                 I   +FS +GK    S   D  + I+++D + ++                +RL 
Sbjct: 76  SRHTGSITCVKFSPDGKYLA-SGSDDRILLIWALDEEQSSQPAFGSEHEREHWTVRKRLV 134

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQ 357
                     ++PDSS +V      G ++  ++ +  + +K    D   S    V + P 
Sbjct: 135 AHDNDIQDICWAPDSSILVTV----GLDRSVIVWNGSTFEKLKRFDVHQSLVKGVVFDPA 190

Query: 358 GDLIAFTKFSGEKFAIGVMKKDG----SQERLLVE-------DSNLQAPTWSPSGRSLIF 406
               A T        I    K G    + E ++ E        +  + P+WSP G+ +  
Sbjct: 191 NKYFATTS-DDRTMKIFRYHKTGDISFTIEHIITEPFKESPLTTYFRRPSWSPDGQHIAV 249

Query: 407 SRKKDGDTGS 416
               +G   S
Sbjct: 250 PNATNGPVSS 259



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 76/209 (36%), Gaps = 33/209 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--------------KRIGNFRSMILAP 263
           +FSP+ + +A  + D   IL ++ +D      P              KR+    + I   
Sbjct: 86  KFSPDGKYLASGSDD--RILLIWALDEEQSSQPAFGSEHEREHWTVRKRLVAHDNDIQDI 143

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDR 322
            ++ +    L++V  D ++ ++  +  +    +R      +     + P +      SD 
Sbjct: 144 CWAPD-SSILVTVGLDRSVIVW--NGSTFEKLKRFDVHQSLVKGVVFDPANKYFATTSD- 199

Query: 323 EGKEQLYVMQSNGS---DQKRISQDKE------ASYFDPVWSPQGDLIAF-TKFSGEKFA 372
           +   +++     G      + I  +          +  P WSP G  IA     +G   +
Sbjct: 200 DRTMKIFRYHKTGDISFTIEHIITEPFKESPLTTYFRRPSWSPDGQHIAVPNATNGPVSS 259

Query: 373 IGVMKKDG--SQERLLVEDSNLQAPTWSP 399
           + ++ +    +   L+  D+  +   ++P
Sbjct: 260 VAIVNRGTWDTNVSLIGHDAPTEVARFNP 288


>gi|289826411|ref|ZP_06545523.1| putative ATP/GTP-binding protein [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
          Length = 408

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 49/161 (30%), Gaps = 21/161 (13%)

Query: 280 EAMDIYSVDLQSNATERLTNT-----LFINISAS-Y---SPDSSQIVF-ESDREGKEQLY 329
                           RLT T       +      +   +P ++ I F   D  G  QL+
Sbjct: 255 GTESTMPSPPLGVVQRRLTFTHQRVYPGLTNEPRHWVRSNPQATAIAFLMRDDNGVAQLW 314

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           ++   G + ++++           W   G  +     +     I        +   L   
Sbjct: 315 LISPQGGEPRQLTHHATGVQSAFNWHSSGKWLGLVLEN----RIACCDAQSGKIDFLTAR 370

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  A  +SP GR + +  +  G    +L+ +   GR
Sbjct: 371 HDNPPSADAVVFSPDGRHVAWMEEVKGFR--QLW-VTETGR 408



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 16/119 (13%), Positives = 33/119 (27%), Gaps = 20/119 (16%)

Query: 267 SNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
                    ++ D     ++ +  Q     +LT+               Q  F     GK
Sbjct: 295 PQATAIAFLMRDDNGVAQLWLISPQGGEPRQLTHHA----------TGVQSAFNWHSSGK 344

Query: 326 -------EQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                   ++    +       ++   D   S    V+SP G  +A+ +       + V
Sbjct: 345 WLGLVLENRIACCDAQSGKIDFLTARHDNPPSADAVVFSPDGRHVAWMEEVKGFRQLWV 403


>gi|207347816|gb|EDZ73875.1| YBL008Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 839

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 66/190 (34%), Gaps = 33/190 (17%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---------------TERLT 298
                 I   +FS +GK    S   D  + I+++D + ++                +RL 
Sbjct: 76  SRHTGSITCVKFSPDGKYLA-SGSDDRILLIWALDEEQSSQPAFGSEHEREHWTVRKRLV 134

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQ 357
                     ++PDSS +V      G ++  ++ +  + +K    D   S    V + P 
Sbjct: 135 AHDNDIQDICWAPDSSILVTV----GLDRSVIVWNGSTFEKLKRFDVHQSLVKGVVFDPA 190

Query: 358 GDLIAFTKFSGEKFAIGVMKKDG----SQERLLVE-------DSNLQAPTWSPSGRSLIF 406
               A T        I    K G    + E ++ E        +  + P+WSP G+ +  
Sbjct: 191 NKYFATTS-DDRTMKIFRYHKTGDISFTIEHIITEPFKESPLTTYFRRPSWSPDGQHIAV 249

Query: 407 SRKKDGDTGS 416
               +G   S
Sbjct: 250 PNATNGPVSS 259



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 76/209 (36%), Gaps = 33/209 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--------------KRIGNFRSMILAP 263
           +FSP+ + +A  + D   IL ++ +D      P              KR+    + I   
Sbjct: 86  KFSPDGKYLASGSDD--RILLIWALDEEQSSQPAFGSEHEREHWTVRKRLVAHDNDIQDI 143

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDR 322
            ++ +    L++V  D ++ ++  +  +    +R      +     + P +      SD 
Sbjct: 144 CWAPD-SSILVTVGLDRSVIVW--NGSTFEKLKRFDVHQSLVKGVVFDPANKYFATTSD- 199

Query: 323 EGKEQLYVMQSNGS---DQKRISQDKE------ASYFDPVWSPQGDLIAF-TKFSGEKFA 372
           +   +++     G      + I  +          +  P WSP G  IA     +G   +
Sbjct: 200 DRTMKIFRYHKTGDISFTIEHIITEPFKESPLTTYFRRPSWSPDGQHIAVPNATNGPVSS 259

Query: 373 IGVMKKDG--SQERLLVEDSNLQAPTWSP 399
           + ++ +    +   L+  D+  +   ++P
Sbjct: 260 VAIVNRGTWDTNVSLIGHDAPTEVARFNP 288


>gi|190408834|gb|EDV12099.1| HIR1 [Saccharomyces cerevisiae RM11-1a]
 gi|256273161|gb|EEU08110.1| Hir1p [Saccharomyces cerevisiae JAY291]
 gi|323338814|gb|EGA80029.1| Hir1p [Saccharomyces cerevisiae Vin13]
          Length = 839

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 66/190 (34%), Gaps = 33/190 (17%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---------------TERLT 298
                 I   +FS +GK    S   D  + I+++D + ++                +RL 
Sbjct: 76  SRHTGSITCVKFSPDGKYLA-SGSDDRILLIWALDEEQSSQPAFGSEHEREHWTVRKRLV 134

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQ 357
                     ++PDSS +V      G ++  ++ +  + +K    D   S    V + P 
Sbjct: 135 AHDNDIQDICWAPDSSILVTV----GLDRSVIVWNGSTFEKLKRFDVHQSLVKGVVFDPA 190

Query: 358 GDLIAFTKFSGEKFAIGVMKKDG----SQERLLVE-------DSNLQAPTWSPSGRSLIF 406
               A T        I    K G    + E ++ E        +  + P+WSP G+ +  
Sbjct: 191 NKYFATTS-DDRTMKIFRYHKTGDISFTIEHIITEPFKESPLTTYFRRPSWSPDGQHIAV 249

Query: 407 SRKKDGDTGS 416
               +G   S
Sbjct: 250 PNATNGPVSS 259



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 76/209 (36%), Gaps = 33/209 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--------------KRIGNFRSMILAP 263
           +FSP+ + +A  + D   IL ++ +D      P              KR+    + I   
Sbjct: 86  KFSPDGKYLASGSDD--RILLIWALDEEQSSQPAFGSEHEREHWTVRKRLVAHDNDIQDI 143

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDR 322
            ++ +    L++V  D ++ ++  +  +    +R      +     + P +      SD 
Sbjct: 144 CWAPD-SSILVTVGLDRSVIVW--NGSTFEKLKRFDVHQSLVKGVVFDPANKYFATTSD- 199

Query: 323 EGKEQLYVMQSNGS---DQKRISQDKE------ASYFDPVWSPQGDLIAF-TKFSGEKFA 372
           +   +++     G      + I  +          +  P WSP G  IA     +G   +
Sbjct: 200 DRTMKIFRYHKTGDISFTIEHIITEPFKESPLTTYFRRPSWSPDGQHIAVPNATNGPVSS 259

Query: 373 IGVMKKDG--SQERLLVEDSNLQAPTWSP 399
           + ++ +    +   L+  D+  +   ++P
Sbjct: 260 VAIVNRGTWDTNVSLIGHDAPTEVARFNP 288


>gi|151946387|gb|EDN64609.1| histone regulation protein [Saccharomyces cerevisiae YJM789]
          Length = 840

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 66/190 (34%), Gaps = 33/190 (17%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---------------TERLT 298
                 I   +FS +GK    S   D  + I+++D + ++                +RL 
Sbjct: 76  SRHTGSITCVKFSPDGKYLA-SGSDDRILLIWALDEEQSSQPAFGSEHEREHWTVRKRLV 134

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQ 357
                     ++PDSS +V      G ++  ++ +  + +K    D   S    V + P 
Sbjct: 135 AHDNDIQDICWAPDSSILVTV----GLDRSVIVWNGSTFEKLKRFDVHQSLVKGVVFDPA 190

Query: 358 GDLIAFTKFSGEKFAIGVMKKDG----SQERLLVE-------DSNLQAPTWSPSGRSLIF 406
               A T        I    K G    + E ++ E        +  + P+WSP G+ +  
Sbjct: 191 NKYFATTS-DDRTMKIFRYHKTGDISFTIEHIITEPFKESPLTTYFRRPSWSPDGQHIAV 249

Query: 407 SRKKDGDTGS 416
               +G   S
Sbjct: 250 PNATNGPVSS 259



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 76/209 (36%), Gaps = 33/209 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--------------KRIGNFRSMILAP 263
           +FSP+ + +A  + D   IL ++ +D      P              KR+    + I   
Sbjct: 86  KFSPDGKYLASGSDD--RILLIWALDEEQSSQPAFGSEHEREHWTVRKRLVAHDNDIQDI 143

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDR 322
            ++ +    L++V  D ++ ++  +  +    +R      +     + P +      SD 
Sbjct: 144 CWAPD-SSILVTVGLDRSVIVW--NGSTFEKLKRFDVHQSLVKGVVFDPANKYFATTSD- 199

Query: 323 EGKEQLYVMQSNGS---DQKRISQDKE------ASYFDPVWSPQGDLIAF-TKFSGEKFA 372
           +   +++     G      + I  +          +  P WSP G  IA     +G   +
Sbjct: 200 DRTMKIFRYHKTGDISFTIEHIITEPFKESPLTTYFRRPSWSPDGQHIAVPNATNGPVSS 259

Query: 373 IGVMKKDG--SQERLLVEDSNLQAPTWSP 399
           + ++ +    +   L+  D+  +   ++P
Sbjct: 260 VAIVNRGTWDTNVSLIGHDAPTEVARFNP 288


>gi|110282967|sp|P32479|HIR1_YEAST RecName: Full=Protein HIR1; AltName: Full=Histone transcription
           regulator 1
 gi|1680406|gb|AAB23989.1|S47695_3 YBL03-18 [Saccharomyces cerevisiae]
 gi|535992|emb|CAA84827.1| HIR1 [Saccharomyces cerevisiae]
          Length = 840

 Score = 53.5 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 66/190 (34%), Gaps = 33/190 (17%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---------------TERLT 298
                 I   +FS +GK    S   D  + I+++D + ++                +RL 
Sbjct: 76  SRHTGSITCVKFSPDGKYLA-SGSDDRILLIWALDEEQSSQPAFGSEHEREHWTVRKRLV 134

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQ 357
                     ++PDSS +V      G ++  ++ +  + +K    D   S    V + P 
Sbjct: 135 AHDNDIQDICWAPDSSILVTV----GLDRSVIVWNGSTFEKLKRFDVHQSLVKGVVFDPA 190

Query: 358 GDLIAFTKFSGEKFAIGVMKKDG----SQERLLVE-------DSNLQAPTWSPSGRSLIF 406
               A T        I    K G    + E ++ E        +  + P+WSP G+ +  
Sbjct: 191 NKYFATTS-DDRTMKIFRYHKTGDISFTIEHIITEPFKESPLTTYFRRPSWSPDGQHIAV 249

Query: 407 SRKKDGDTGS 416
               +G   S
Sbjct: 250 PNATNGPVSS 259



 Score = 43.1 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 76/209 (36%), Gaps = 33/209 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--------------KRIGNFRSMILAP 263
           +FSP+ + +A  + D   IL ++ +D      P              KR+    + I   
Sbjct: 86  KFSPDGKYLASGSDD--RILLIWALDEEQSSQPAFGSEHEREHWTVRKRLVAHDNDIQDI 143

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDR 322
            ++ +    L++V  D ++ ++  +  +    +R      +     + P +      SD 
Sbjct: 144 CWAPD-SSILVTVGLDRSVIVW--NGSTFEKLKRFDVHQSLVKGVVFDPANKYFATTSD- 199

Query: 323 EGKEQLYVMQSNGS---DQKRISQDKE------ASYFDPVWSPQGDLIAF-TKFSGEKFA 372
           +   +++     G      + I  +          +  P WSP G  IA     +G   +
Sbjct: 200 DRTMKIFRYHKTGDISFTIEHIITEPFKESPLTTYFRRPSWSPDGQHIAVPNATNGPVSS 259

Query: 373 IGVMKKDG--SQERLLVEDSNLQAPTWSP 399
           + ++ +    +   L+  D+  +   ++P
Sbjct: 260 MAIVNRGTWDTNVSLIGHDAPTEVARFNP 288


>gi|328865347|gb|EGG13733.1| WD40 repeat-containing protein [Dictyostelium fasciculatum]
          Length = 336

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 64/193 (33%), Gaps = 16/193 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISV 276
            FSP      + T   +  + ++   T       + G    + +    +S        + 
Sbjct: 121 AFSPKGD--IFVTVSQKGAVNIWSSKTGDKIRTFQTGTPSKVSILNATYSPKDNHIACAG 178

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY  D+++   +R+ N    + S     YSPD + I F +  +   Q+ +   
Sbjct: 179 S-DGVVSIY--DVETG--KRVNNFNAHSTSIRSICYSPDGATI-FTASED--TQIRISDP 230

Query: 334 NGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             S     S    +S+      S  G  IA +  S  +  I  +               +
Sbjct: 231 LSSSGSIASFQGHSSWVLSVACSNDGKKIA-SGSSDRRVKIWDISTRKCDHTFQDHADQV 289

Query: 393 QAPTWSPSGRSLI 405
               WSP G  L+
Sbjct: 290 WGVAWSPDGSKLV 302



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 65/214 (30%), Gaps = 21/214 (9%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V L +   +   K I        +  FS  G    ++V +  A++I+S           T
Sbjct: 96  VRLWNLTDNTLSKDIDVGPLGTWSTAFSPKGD-IFVTVSQKGAVNIWSSKTGDKIRTFQT 154

Query: 299 NTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            T       +A+YSP  + I   +  +G   +Y        +         S     +SP
Sbjct: 155 GTPSKVSILNATYSPKDNHIA-CAGSDGVVSIY--DVETGKRVNNFNAHSTSIRSICYSP 211

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW------SPSGRSLIFSRKK 410
            G  I FT     +  I +     S   +     +    +W      S  G+ +      
Sbjct: 212 DGATI-FTASEDTQ--IRISDPLSSSGSIASFQGHS---SWVLSVACSNDGKKIA---SG 262

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             D   K++ I     + T  +         W  
Sbjct: 263 SSDRRVKIWDISTRKCDHTFQDHADQVWGVAWSP 296



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 16/162 (9%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGK 270
           +    +SP    +A A  D   ++ +Y ++T      KR+ NF +   + R   +S +G 
Sbjct: 162 ILNATYSPKDNHIACAGSD--GVVSIYDVETG-----KRVNNFNAHSTSIRSICYSPDGA 214

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQLY 329
               +  +D  + I      S +           +S + S D  +I    SDR    ++ 
Sbjct: 215 TI-FTASEDTQIRISDPLSSSGSIASFQGHSSWVLSVACSNDGKKIASGSSDR----RVK 269

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +   +        QD     +   WSP G  +       + F
Sbjct: 270 IWDISTRKCDHTFQDHADQVWGVAWSPDGSKLVSVSDDCKPF 311



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 5/73 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +     S + +K+A  + D     RV + D    +      +    +    +S
Sbjct: 240 FQGHSSWVLSVACSNDGKKIASGSSDR----RVKIWDISTRKCDHTFQDHADQVWGVAWS 295

Query: 267 SNGKRALISVQKD 279
            +G + + SV  D
Sbjct: 296 PDGSKLV-SVSDD 307


>gi|229186595|ref|ZP_04313756.1| TolB domain protein [Bacillus cereus BGSC 6E1]
 gi|228596854|gb|EEK54513.1| TolB domain protein [Bacillus cereus BGSC 6E1]
          Length = 410

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 85/248 (34%), Gaps = 51/248 (20%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             + L +   DG   +     + + +  P++S + + +AY     +  L +Y +     +
Sbjct: 35  RHHDLWI-KVDGKEKQLT---KGEYITGPKWSHDGEWLAYVKGKKQGSLELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             K++  F S     ++S               +  + V+ ++   E ++  +      +
Sbjct: 86  DGKKVTPFHSEASNYQWSPTENIIAFIFT--GTLHTFKVEKKNADFENVSAGVGDY---A 140

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-------------------- 348
           + P+  + +  S+       +     G+    + +D   +                    
Sbjct: 141 WYPNGKKFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHDDFLAL 196

Query: 349 -YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWS 398
                 WSP    I+F       +S +   + +++ DGS+     ++L+     +   W+
Sbjct: 197 VASGFQWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNTQWFK---WA 253

Query: 399 PSGRSLIF 406
           P+   L +
Sbjct: 254 PANNILAY 261



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 10/87 (11%)

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G  IAF +       + + K DG +E+ L +   +  P WS  G  L + + K      +
Sbjct: 28  GVKIAFIRH----HDLWI-KVDG-KEKQLTKGEYITGPKWSHDGEWLAYVKGKK-QGSLE 80

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           LY +  +G+  T  ++   AS+ QW  
Sbjct: 81  LYRLK-DGKKVTPFHS--EASNYQWSP 104


>gi|172035117|ref|YP_001801618.1| peptidase, S9C [Cyanothece sp. ATCC 51142]
 gi|171696571|gb|ACB49552.1| peptidase, S9C [Cyanothece sp. ATCC 51142]
          Length = 645

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 15/134 (11%)

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-------GEKFAI 373
           DRE + ++  +     D   +  + +  Y  P  SP G  +A+  ++       G K  +
Sbjct: 144 DRECENKIVAIDIKTGDITTLI-EGDDFYSSPRLSPDGTQLAWISWNHPNMPWDGTKLWL 202

Query: 374 GVMKKDGS--QERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           G ++ DGS  + + +  D +  +  P W+P G+ L +   + G   S LY    N  N  
Sbjct: 203 GNIESDGSLKEIKWIAGDIDESISEPKWAPDGQ-LYYVSDQSG--WSNLYCYKANVNNVP 259

Query: 430 LINTPAYASDPQWV 443
           +    A  S P WV
Sbjct: 260 IFPFTAEFSYPHWV 273



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 10/124 (8%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQ--SNG 335
            I ++D+++     L        S   SPD +Q+ + S           +L++    S+G
Sbjct: 150 KIVAIDIKTGDITTLIEGDDFYSSPRLSPDGTQLAWISWNHPNMPWDGTKLWLGNIESDG 209

Query: 336 S--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           S  + K I+ D + S  +P W+P G  + +         +   K + +   +    +   
Sbjct: 210 SLKEIKWIAGDIDESISEPKWAPDGQ-LYYVSDQSGWSNLYCYKANVNNVPIFPFTAEFS 268

Query: 394 APTW 397
            P W
Sbjct: 269 YPHW 272



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 37/89 (41%), Gaps = 9/89 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRI----GNF 256
                 D     PR SP+  ++A+ +++      D  +++L +   D + K I    G+ 
Sbjct: 162 TTLIEGDDFYSSPRLSPDGTQLAWISWNHPNMPWDGTKLWLGNIESDGSLKEIKWIAGDI 221

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIY 285
              I  P+++ +G +      +    ++Y
Sbjct: 222 DESISEPKWAPDG-QLYYVSDQSGWSNLY 249



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 71/204 (34%), Gaps = 35/204 (17%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +   +  ++S +G+   I+ Q          +++S   E            S+   +  +
Sbjct: 48  KGRNVLVKYSPDGQMTEITPQP--------FNVRSRVHEY--------GGGSFLVKNGVV 91

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK------ 370
            F + ++  ++LY    N    K ++ + +  Y D V  P  + +        +      
Sbjct: 92  YFINYQD--QRLYQQLPN-EAPKPLTSENQCRYADFVLDPNYNRLISVCEDHSQTDRECE 148

Query: 371 FAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDT---GSKLYS--IDLN 424
             I  +         L+E  +  + P  SP G  L +      +    G+KL+   I+ +
Sbjct: 149 NKIVAIDIKTGDITTLIEGDDFYSSPRLSPDGTQLAWISWNHPNMPWDGTKLWLGNIESD 208

Query: 425 GRNETLINTPAY----ASDPQWVG 444
           G  + +           S+P+W  
Sbjct: 209 GSLKEIKWIAGDIDESISEPKWAP 232


>gi|13472873|ref|NP_104440.1| WD-40 repeat-containing beta transducin-like protein [Mesorhizobium
           loti MAFF303099]
 gi|14023620|dbj|BAB50226.1| WD-40 repeat protein, beta transducin-like protein [Mesorhizobium
           loti MAFF303099]
          Length = 992

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 66/201 (32%), Gaps = 34/201 (16%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           + +D        RI           F+ +G+  + S   D+ + I+  D QS  T R   
Sbjct: 19  FRLDLDTGGHTARIARL-------AFTPDGEDIV-SASDDKTIRIW--DWQSGVTLRTIR 68

Query: 300 TLFINIS------ASYSPDSSQIV----FESDREGKE---QLYVMQSNGSDQKRISQDKE 346
               N S       S SPD   I     F +    K     + +        K + +  +
Sbjct: 69  GYLGNGSDGKIFAVSVSPDGKTIAAGGYFGAGLGDKPPYGDIRLFDFATGKMKAVLRAAD 128

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            + +D  +SP G  +A     G    + + + D         D  L A +W      L F
Sbjct: 129 YATYDLAFSPDGKTLA---AGGGDGMVYLWRLDDKSATGWTLDKKLDADSWHID--KLAF 183

Query: 407 S------RKKDGDTGSKLYSI 421
           +           D G +L+ +
Sbjct: 184 AAAGTRLAATTTDNGIRLWDV 204



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 83/255 (32%), Gaps = 27/255 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATY------DDEDILRVYLMDTRIDRAPKRIGNFRS 258
           YL    D  +F    SP+ + +A   Y      D      + L D    +    +     
Sbjct: 70  YLGNGSDGKIFAVSVSPDGKTIAAGGYFGAGLGDKPPYGDIRLFDFATGKMKAVLRAADY 129

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT----ERLTNTLFINISASYSPDSS 314
                 FS +GK    +   D  + ++ +D +S       ++L    +     +++   +
Sbjct: 130 ATYDLAFSPDGKTLA-AGGGDGMVYLWRLDDKSATGWTLDKKLDADSWHIDKLAFAAAGT 188

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDLIAFTKFSGEK 370
           ++   +   G   + +      ++  +  +    ++ S      S  G L A     G +
Sbjct: 189 RLAATTTDNG---IRLWDVAKGEEIALPDEAEPLRDVSVLALAISQDGSLFATGSKDG-Q 244

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY--------SID 422
             +           +  +D  + + T++   R +     +  D    +          +D
Sbjct: 245 VQLWRAADGTLVHAMPKQDFLIGSLTFAKGSRLVASCGYRCADKHRSIVWNTDSGEKLLD 304

Query: 423 LNGRNETLINTPAYA 437
            +G + T+  + A A
Sbjct: 305 YSGHDGTVYASAANA 319


>gi|332206057|ref|XP_003252106.1| PREDICTED: aladin isoform 1 [Nomascus leucogenys]
          Length = 546

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 67/198 (33%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  DD     V + +      P      +  + A  +       L    
Sbjct: 158 AWHPHTNKFAVALLDD----SVRVYNASSTIVPSLKHRLQRNVAALAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIR 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     +  WSP G  I  T  S   F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLFWSPDGSKILATTPS-AVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGSRLLFT 346



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 60/209 (28%), Gaps = 42/209 (20%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V D        L   R   +    +SP+  K+   T     + RV+          +R
Sbjct: 269 IRVWDVSTETCVPLPWFRGGGVTNLFWSPDGSKILATT--PSAVFRVWEAQMWT---CER 323

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                       +S +G R L +V       IYS+       ER                
Sbjct: 324 WPTLSGRCQTGCWSPDGSRLLFTVL--GEPLIYSLSF----PERCGEGKG---------- 367

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDLIAFTKFSG 368
                    R G  +   + ++ S+    + D E          VW P G+ +A      
Sbjct: 368 ---------RVGGAKSATIVADLSETTIQTPDGEERLGGEAHSMVWDPSGERLAVLMKGN 418

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +        DG    LL    N  +P +
Sbjct: 419 PRVQ------DGKPVILLFRTRN--SPVF 439



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 37/339 (10%), Positives = 98/339 (28%), Gaps = 51/339 (15%)

Query: 135 DRKQIIGKKFFSSPASWR------KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           + + + G  + S P  +R       + H   D +    T  + D  +R  F+        
Sbjct: 22  NNELVTGSSYESPPPDFRGQWINLPVLHLTKDPL---KTPGRLDHGTRTAFIHHREQVWK 78

Query: 189 IKNSLC-----------VMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATYDDED 235
              ++            + + +     ++  +    L   R+  S +     + +   ED
Sbjct: 79  RCINIWRDVGLFGVLNEIANSEEEVFEWVKTASGWALALCRWASSLHGSLFPHLSLRSED 138

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           ++  +   T       R+           +  +  +  +++  D    +   +  S    
Sbjct: 139 LIAEFAQVTNWSSCCLRVF---------AWHPHTNKFAVALLDD---SVRVYNASSTIVP 186

Query: 296 RLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQS-------NGSDQKRISQDKEA 347
            L + L  N++A ++ P S+ ++  + +     ++ +         +    + +S     
Sbjct: 187 SLKHRLQRNVAALAWKPLSASVLAVACQS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHT 245

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                 W+P G  +           +  +  +            +    WSP G  ++  
Sbjct: 246 PVTSLAWAPSGGRLLSASPVDAAIRVWDVSTETCVPLPWFRGGGVTNLFWSPDGSKIL-- 303

Query: 408 RKKDGDTGSKLYSIDLNGRN--ETLINTPAYASDPQWVG 444
                 T S ++ +        E             W  
Sbjct: 304 ----ATTPSAVFRVWEAQMWTCERWPTLSGRCQTGCWSP 338


>gi|320102073|ref|YP_004177664.1| hypothetical protein Isop_0522 [Isosphaera pallida ATCC 43644]
 gi|319749355|gb|ADV61115.1| hypothetical protein Isop_0522 [Isosphaera pallida ATCC 43644]
          Length = 706

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 61/200 (30%), Gaps = 39/200 (19%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP-DSSQIVFESDR 322
            +S +G+     +    A D++  D              ++IS    P D+++ +     
Sbjct: 55  AWSPDGRWIAYVMANRSAADLFPAD-----------WWALDISQRLEPADAARPI----- 98

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK----- 377
                L+  +        +++        PVW P G  +A+ +         + +     
Sbjct: 99  --SWTLWATEWETGRSVALAR-SAGPLGAPVWRPDGGALAYVQLDPASNNPALPRQRTLW 155

Query: 378 KDGSQERLLVEDSNLQ-------------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +  R +  D                 AP +S +GR L +    D  TG  +    L 
Sbjct: 156 LQTAPNRRVPLDRRPHPPEWDRLGVEPVAAPAFSRNGRKLAY-EVYDPQTGPGVVVARLT 214

Query: 425 GRNETLINTPAYASDPQWVG 444
                 + T      P W G
Sbjct: 215 AERLEPLQTLPGVGRPVWSG 234



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 75/245 (30%), Gaps = 39/245 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + +AY    +     ++  D       +R+         P              
Sbjct: 55  AWSPDGRWIAYV-MANRSAADLFPADWWALDISQRL--------EPA----------DAA 95

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-----SDREGKEQLYVMQ 332
           +  +  +++ + ++  +  L  +     +  + PD   + +      S+     +   + 
Sbjct: 96  RPISWTLWATEWETGRSVALARSAGPLGAPVWRPDGGALAYVQLDPASNNPALPRQRTLW 155

Query: 333 SNGSDQKRISQDKEA-----------SYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDG 380
              +  +R+  D+                 P +S  G  +A+  +       + V +   
Sbjct: 156 LQTAPNRRVPLDRRPHPPEWDRLGVEPVAAPAFSRNGRKLAYEVYDPQTGPGVVVARLTA 215

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI-FSRKKDGDTGS--KLYSIDLNGRNETLINTPAYA 437
            +   L     +  P WS    SL  F+ +  G      +L   D +       +    A
Sbjct: 216 ERLEPLQTLPGVGRPVWSGRDDSLACFALESHGRLAPVAELVVFDPDFNLTARSSGVLTA 275

Query: 438 SDPQW 442
           S P W
Sbjct: 276 STPVW 280


>gi|333029879|ref|ZP_08457940.1| Dipeptidyl-peptidase IV [Bacteroides coprosuis DSM 18011]
 gi|332740476|gb|EGJ70958.1| Dipeptidyl-peptidase IV [Bacteroides coprosuis DSM 18011]
          Length = 728

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 36/191 (18%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSM 259
            NI  + P  D   +  + +P   ++   ++     +  V+ + T  D   K   N+   
Sbjct: 38  ENIYGIVPMNDGEHYT-QMNPEGTQIIKYSFKTGKPVSTVFDVKTARDSNIKSFNNY--- 93

Query: 260 ILAPRFSSNGKRALIS------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                FS +  + LI+       ++      Y   ++ N  E L++      S  +SPD 
Sbjct: 94  ----TFSPDESKILIATDKKSIYRRSYTAIHYIYTIERNVLEPLSDF-GPQQSPVFSPDG 148

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---YFDPVW--------------SP 356
             + F  D        V    G+ + +I+ D E +      P W              S 
Sbjct: 149 HMVAFVRD---NNIFLVKFLYGNSESQITTDGEFNKILNGIPDWVYEEEFGFNRALEFSA 205

Query: 357 QGDLIAFTKFS 367
              ++A+ KF 
Sbjct: 206 DNKMLAYIKFD 216



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 49/146 (33%), Gaps = 21/146 (14%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +P+ +QI+  S + GK    V     +    I      S+ +  +SP    I        
Sbjct: 56  NPEGTQIIKYSFKTGKPVSTVFDVKTARDSNIK-----SFNNYTFSPDESKILIATDKKS 110

Query: 370 KFA------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +         +   + +    L +    Q+P +SP G  + F R  +      LY    
Sbjct: 111 IYRRSYTAIHYIYTIERNVLEPLSDFGPQQSPVFSPDGHMVAFVRDNNIFLVKFLY---- 166

Query: 424 NGRNETLINTPAY-----ASDPQWVG 444
            G +E+ I T           P WV 
Sbjct: 167 -GNSESQITTDGEFNKILNGIPDWVY 191



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/214 (13%), Positives = 67/214 (31%), Gaps = 47/214 (21%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  L D+   K I    +   P         ++D  + +    +G    +  F +   VS
Sbjct: 24  QIELKDIVQGKYIPENIYGIVP---------MNDGEHYTQMNPEGTQIIKYSFKTGKPVS 74

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA----TYDDEDILRVYLM 242
            +             +++    S  +      FSP++ K+  A    +        ++ +
Sbjct: 75  TV------------FDVKTARDSNIKSFNNYTFSPDESKILIATDKKSIYRRSYTAIHYI 122

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL- 301
            T      + + +F     +P FS +G        +D  + +    L  N+  ++T    
Sbjct: 123 YTIERNVLEPLSDF-GPQQSPVFSPDGHMVAFV--RDNNIFLVKF-LYGNSESQITTDGE 178

Query: 302 -----------------FINISASYSPDSSQIVF 318
                              N +  +S D+  + +
Sbjct: 179 FNKILNGIPDWVYEEEFGFNRALEFSADNKMLAY 212



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 92/274 (33%), Gaps = 58/274 (21%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y     + G+ NS+I   S  + S + +     +D DG   R             RF+ +
Sbjct: 245 YTYKYPKAGEPNSKISVHSFDIKSKVTRQLQVPLDADGYIPRI------------RFTKD 292

Query: 223 QQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            +K+A +     ++ L +Y  + +                         +  +  +    
Sbjct: 293 AEKLAVFTMNRHQNRLDIYFTNPKSTV---------------------SKLALREESKYY 331

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           ++   +D          N  F + + S         F S+R+G   LY    NG+  K++
Sbjct: 332 IEESVLD----------NVHFYDNNFS---------FISERDGYSHLYWYNMNGNLVKQV 372

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPS 400
           ++          W+ + +        G      + K D  +++ LL          +S  
Sbjct: 373 TKGNYEVKNFLGWNEKENCFYVESNEGNPTETAIYKIDRKEKKTLLTCQKGTNTAIFS-- 430

Query: 401 GRSLIFSRKKDGDTGSKLYSI-DLNGRN-ETLIN 432
           G    F  K    T   L ++ D NG+   TLI+
Sbjct: 431 GDMRYFINKYTSFTEPMLVTLNDNNGKTLHTLID 464


>gi|326496084|dbj|BAJ90663.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326501832|dbj|BAK06408.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326504384|dbj|BAJ91024.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 335

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/318 (12%), Positives = 96/318 (30%), Gaps = 44/318 (13%)

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLG--AQVLVTGRVIKEG-KDRLRVEF 128
           DL            S        D    F+     G   Q +V     +         E 
Sbjct: 47  DLTN-------PVASLGDGTVGTDYAVPFRRLTGHGHFVQDVVISSDGQFALSGSWDGEL 99

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWD+     +  ++F         +A ++               ++R +  +    +  
Sbjct: 100 RLWDLSTG--LTTRRFVGHTKDVISVAFSV---------------DNRQIVSASRDNTIK 142

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           + N+L                    +   RFSPN Q+    +   +  ++V+  +    +
Sbjct: 143 LWNTLGECKYTIGGDMGGGEGHTGWVSCVRFSPNIQQPTIVSGSWDKTVKVW--NLANCK 200

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
               +      + A   S +G     S  KD    ++ +  +     +L     I+ S  
Sbjct: 201 LRSTLAGHGGYVNAVAVSPDGSLCA-SGGKDGVTLLWDLS-EGKRLYQLEAGSIIH-SLC 257

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNG-------SDQKRISQDKEASYFDPVWSPQGDLI 361
           +SP+   +   ++      + +              + ++S+++        WS  G  +
Sbjct: 258 FSPNRYWLCAATEES----IKIWDLESKHVVQDLKPEVQVSKNQMLYCTSLSWSADGSTL 313

Query: 362 AFTKFSGEKFAIGVMKKD 379
            +T ++     +  ++  
Sbjct: 314 -YTGYTDGTIRVFKIQAG 330


>gi|196230740|ref|ZP_03129601.1| Planctomycete cytochrome C [Chthoniobacter flavus Ellin428]
 gi|196225081|gb|EDY19590.1| Planctomycete cytochrome C [Chthoniobacter flavus Ellin428]
          Length = 805

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 77/212 (36%), Gaps = 14/212 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISV 276
            FSP+ +++A  + +      + L D    +  +      S  +L+  FS +GK    S 
Sbjct: 597 AFSPDGKQLATGSGEPSRGGELKLWDVASGQLVRDFPKAHSDAVLSLEFSPDGKFLA-SG 655

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D+   +  V                 +  ++S D   +   +  +G   + V      
Sbjct: 656 AADKMARVTEV-ATGKVVRNFEGHTHHVLGVTWSADGRTLA-TAGADG--MVKVWDFTTG 711

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAP 395
           D+K+  +  +       +      +  +        + ++  DG + R+  E ++ +++ 
Sbjct: 712 DRKKNIEGYDKEVTAVRFVGATANLVTSSGDN---KVRLVALDGKEVRVFPEVADFMESA 768

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             S  G++++       D+  ++++   +G  
Sbjct: 769 AVSADGKTVV---AGGQDSVLRIWN-STDGGK 796



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/199 (12%), Positives = 55/199 (27%), Gaps = 21/199 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-----I 260
           +    D  +    F P  + +   +   +  +  + +                      +
Sbjct: 537 VLKGHDAAVTSLAFVPGGELI---SATADGAVLAWNLAPEWKLERTIGTGNAGSPLTDRV 593

Query: 261 LAPRFSSNGKRALISV---QKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQ 315
            A  FS +GK+         +   + ++  D+ S    R          +S  +SPD   
Sbjct: 594 NAVAFSPDGKQLATGSGEPSRGGELKLW--DVASGQLVRDFPKAHSDAVLSLEFSPDGK- 650

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             F +     +   V +       R  +          WS  G  +A    +G    + V
Sbjct: 651 --FLASGAADKMARVTEVATGKVVRNFEGHTHHVLGVTWSADGRTLA---TAGADGMVKV 705

Query: 376 MKKDGSQERLLVEDSNLQA 394
                   +  +E  + + 
Sbjct: 706 WDFTTGDRKKNIEGYDKEV 724



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 65/236 (27%), Gaps = 37/236 (15%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           L TG            E +LWDV   + +            R      SD +        
Sbjct: 605 LATGSGEPSRGG----ELKLWDVASGQLV------------RDFPKAHSDAVLSLEFSPD 648

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F            SG       V +     +          +    +S + + +A A 
Sbjct: 649 GKFL----------ASGAADKMARVTEVATGKVVRNFEGHTHHVLGVTWSADGRTLATAG 698

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D      V + D       K I  +   + A RF   G  A +     +   +  V L 
Sbjct: 699 ADG----MVKVWDFTTGDRKKNIEGYDKEVTAVRF--VGATANLVTSSGDN-KVRLVALD 751

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                          SA+ S D   +V      G++ +  + ++    K  +   E
Sbjct: 752 GKEVRVFPEVADFMESAAVSADGKTVV----AGGQDSVLRIWNSTDGGKLATFAPE 803



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 67/186 (36%), Gaps = 31/186 (16%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISAS 308
           + +    + I A   + +G+ A  + +      I+   + S       + +   +N S +
Sbjct: 116 QPLAQSLAAIFAVAVTPDGQFAACAREN----RIFIYHVPSGRLVDSEIAHHDQVN-SLA 170

Query: 309 YSPDSSQIVFESDREGKEQLYV-MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +SPD + +     RE   +L+  M   G   + ++   E+S    V    G  +      
Sbjct: 171 FSPDGTLMASGGYRE--VKLWRHMPITGKPAQPLNAPAESSKLARV---DGKTLVLLNAE 225

Query: 368 GEK---------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI------FSRKKDG 412
           G++              ++ DG  +R +    N     WS  G+ +       ++R+  G
Sbjct: 226 GKQVGQVDHGDSIVAYAVRADG--QRFVTAGGNFAK-LWSADGKQIAELRGNRYAREVAG 282

Query: 413 DTGSKL 418
           +    L
Sbjct: 283 ERDRDL 288



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 66/224 (29%), Gaps = 62/224 (27%)

Query: 260 ILAPRFSSNGKRAL----------------------------------------ISVQKD 279
           I A  FS +G                                            IS   D
Sbjct: 503 IRAVAFSPDGTTVATAGDDHLIHTWSAENGAAFDVLKGHDAAVTSLAFVPGGELISATAD 562

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA--------SYSPDSSQIVFES---DREGKEQL 328
            A+  +++  +       T       S         ++SPD  Q+   S    R G+ +L
Sbjct: 563 GAVLAWNLAPEWKLER--TIGTGNAGSPLTDRVNAVAFSPDGKQLATGSGEPSRGGELKL 620

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           + + ++G   +   +    +     +SP G  +A    + +K A  V +    +     E
Sbjct: 621 WDV-ASGQLVRDFPKAHSDAVLSLEFSPDGKFLA--SGAADKMA-RVTEVATGKVVRNFE 676

Query: 389 DSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                    TWS  GR+L        D   K++      R + +
Sbjct: 677 GHTHHVLGVTWSADGRTLA---TAGADGMVKVWDFTTGDRKKNI 717


>gi|119471625|ref|ZP_01614010.1| transcriptional regulator, CadC [Alteromonadales bacterium TW-7]
 gi|119445404|gb|EAW26691.1| transcriptional regulator, CadC [Alteromonadales bacterium TW-7]
          Length = 715

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 68/181 (37%), Gaps = 15/181 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   VA + ++ E      L+        K I    + I    +S + +RA+  V+  
Sbjct: 205 SPDNSTVALSFFEKEQQYSSLLIKNLHTGQEKLISEANANISPAGWSMDSERAIYKVESK 264

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY-----SPDSSQIVFE----SDREGKEQLYV 330
               ++ VDL S+A  +       +   SY     S D++ IV+      +R     L  
Sbjct: 265 GKCGLWKVDLTSSAGSKF----LFDCEPSYPMNAISLDNNSIVYSKYGYRNRSELSVLVN 320

Query: 331 MQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
              + +++ +IS     SY D    +    + I F +       + +   +G  +  L E
Sbjct: 321 RNLSTAEEFQISSPNLNSYGDKFLYFIKNKNKIIFERHQFNSSELYMTDLEGGAQIKLYE 380

Query: 389 D 389
            
Sbjct: 381 T 381


>gi|302545899|ref|ZP_07298241.1| putative IPT/TIG domain protein [Streptomyces hygroscopicus ATCC
           53653]
 gi|302463517|gb|EFL26610.1| putative IPT/TIG domain protein [Streptomyces himastatinicus ATCC
           53653]
          Length = 626

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 78/220 (35%), Gaps = 26/220 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  +     +D      V ++DT  +     I      +     + +G RA ++ Q
Sbjct: 138 SFSPDGTRAYVTLFDTG---SVGVIDTATNVLTTTIPVGAGAVQC-ALTPDGTRAYVTCQ 193

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               +    +D  +N+       L +   A+ SPD +++   +  +G   +    +N   
Sbjct: 194 TAGVVS--VIDTTTNSVTTPITGLSLPTGAAVSPDGARVYVPNAGDGTVAVIDTATNTVS 251

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPT 396
              ++ D          +P G   A+   +GE  A+ V+    +     +   N  +   
Sbjct: 252 ASILTGDVP---ILVALTPDGTR-AYVSVAGEN-AVKVIDTATNTVTAAIPVGNGPRMVA 306

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            SP G ++              Y  DL+    T+I+T   
Sbjct: 307 MSPDGTAV--------------YVADLSANTVTVIDTATN 332


>gi|147766974|emb|CAN67687.1| hypothetical protein VITISV_009917 [Vitis vinifera]
          Length = 321

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 62/195 (31%), Gaps = 20/195 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S  + + + V D D         +    +++ +F P    +A A         + L DT 
Sbjct: 77  SASLDSFVRVFDVDTNATIATLEAPPSEVWQMQFDPKGSILAVA---GGSSASIKLWDTA 133

Query: 246 IDR-------------APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             +              P   G  +  +L+  +S +G+R       D  + I+ V+    
Sbjct: 134 TWKLIDTLAIPRPESSKPTDRGGNKKFVLSVAWSPDGRRLA-CGSMDGTISIFDVNRA-K 191

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L        S  YSP   +++F +  +G   +Y   + G           +     
Sbjct: 192 FLHHLEGHYXPVRSLVYSPVDPRVLFSASDDGHVHMY--DAEGKSLIGAMSGHASWVLSV 249

Query: 353 VWSPQGDLIAFTKFS 367
             SP G  IA     
Sbjct: 250 DVSPDGAAIATGSSD 264


>gi|118472868|ref|YP_889760.1| peptidase [Mycobacterium smegmatis str. MC2 155]
 gi|118174155|gb|ABK75051.1| peptidase [Mycobacterium smegmatis str. MC2 155]
          Length = 617

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKD 411
            SP G  IA+      +  I V   DGS+ R +  D N  +    W+   R L++ +   
Sbjct: 23  ISPDGTRIAYLAPWQNRLNIWVENVDGSETRCVTADENRSIYIYEWTGDSRWLLYMQDTG 82

Query: 412 GDTGSKLYSIDLN 424
           GD    +Y  D +
Sbjct: 83  GDEYFHVYRADPD 95



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 35/75 (46%), Gaps = 2/75 (2%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  SPD ++I + +  + +  ++V   +GS+ + ++ D+  S +   W+     + + + 
Sbjct: 21  AKISPDGTRIAYLAPWQNRLNIWVENVDGSETRCVTADENRSIYIYEWTGDSRWLLYMQD 80

Query: 367 SGEK--FAIGVMKKD 379
           +G    F +     D
Sbjct: 81  TGGDEYFHVYRADPD 95



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 72/237 (30%), Gaps = 16/237 (6%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R  +    + SP+  ++AY        L +++ +           +    I    ++ + 
Sbjct: 14  RPPVRAAAKISPDGTRIAYLAPWQNR-LNIWVENVDGSETRCVTADENRSIYIYEWTGDS 72

Query: 270 KRALI--SVQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPD--SSQIVFESDRE 323
           +  L       DE   +Y  D    A     LT    +  S           +V  + R 
Sbjct: 73  RWLLYMQDTGGDEYFHVYRADPDDPAATAVDLTPFPGVRTSFELLKGRPGKVMVQLNKRT 132

Query: 324 GK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                   +     +   ++Q+           P GDL   T+ +     I         
Sbjct: 133 STLMDAAELDIATGELTELAQNPGTVTNWQA-GPNGDLFTSTQTAEGDIEIARWDSAAKT 191

Query: 383 ERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            R +        P      + SP G  L F   K G   ++L  +D+    ET +++
Sbjct: 192 LRTIATYDGADYPLGIHPISVSPDGTGLWFGSNK-GTDRTRLVRLDVATGEETEVDS 247



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 79/234 (33%), Gaps = 21/234 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +RI +++        + ++ V + DG+  R +T   ++ ++   ++ + + + Y      
Sbjct: 28  TRIAYLAPW----QNRLNIWVENVDGSETRCVTADENRSIYIYEWTGDSRWLLYMQDTGG 83

Query: 235 D-ILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGK--RALISVQKDEAM--DIYSVD 288
           D    VY  D     A    +  F  +  +      G+  + ++ + K  +   D   +D
Sbjct: 84  DEYFHVYRADPDDPAATAVDLTPFPGVRTSFEL-LKGRPGKVMVQLNKRTSTLMDAAELD 142

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           + +     L        +    P+          EG  ++    S     + I+    A 
Sbjct: 143 IATGELTELAQNPGTVTNWQAGPNGDLFTSTQTAEGDIEIARWDSAAKTLRTIATYDGAD 202

Query: 349 Y----FDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           Y         SP G  + F    G ++  +  +     +E  +        P++
Sbjct: 203 YPLGIHPISVSPDGTGLWFGSNKGTDRTRLVRLDVATGEETEV-----DSHPSF 251


>gi|53712431|ref|YP_098423.1| hypothetical protein BF1139 [Bacteroides fragilis YCH46]
 gi|52215296|dbj|BAD47889.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 952

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 76/236 (32%), Gaps = 11/236 (4%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I   ++   G      L       +    + +   D D  NI+ LTP   Q    P    
Sbjct: 344 INSRLSYRNGRVYWSELVPGLR-WTHQNYSIIKYYDLDKKNIKTLTPR--QRYLSPAIDE 400

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
             Q +A +    E   ++ L+               +  +     + G   +     D  
Sbjct: 401 QGQHIAVSRPTVEGKNQLVLIQAEKGNELAAFDVPDNAFIKELTFAGGDTIISIAVADSG 460

Query: 282 MDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + +   + ++   + L  T   N  S  +  D     FES   G   +Y +        R
Sbjct: 461 IRLLQFNFRNGIWKELLKTTSANITSPVW-KDGKIF-FESGANGTNNIYSLNPADGQVHR 518

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           ++  +  ++     S  G L  F+ +  + + I  +  D     +L E ++L  P 
Sbjct: 519 MTAARFGAFDPSFGSSDGRLF-FSDYQADGYRIASLPTDS----MLFEKADLNRPA 569



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 11/123 (8%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERL 385
           +L          K + +   A+   PVW   G  I F   +     I  +   DG   R+
Sbjct: 462 RLLQFNFRNGIWKELLKTTSANITSPVW-KDGK-IFFESGANGTNNIYSLNPADGQVHRM 519

Query: 386 LVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                    P++ S  GR  +F      D G ++ S+  +    +++   A  + P  + 
Sbjct: 520 TAARFGAFDPSFGSSDGR--LFFSDYQAD-GYRIASLPTD----SMLFEKADLNRPASMP 572

Query: 445 FMD 447
           F++
Sbjct: 573 FVE 575


>gi|297808515|ref|XP_002872141.1| nucleotide binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317978|gb|EFH48400.1| nucleotide binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 669

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 70/226 (30%), Gaps = 16/226 (7%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            ++I      V+ G    +  +M  +G     L       ++   FSP    V  ++ D 
Sbjct: 381 MAKIGQAGSGVLQGENDTNDQIMGPNGRRSYTLLLGHSGPVYSATFSPPGDFVLSSSADT 440

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + L  T+++            +   +FS  G     S   D    I+S+D     
Sbjct: 441 ----TIRLWSTKLNANLVCYKGHNYPVWDVQFSPFGHYFA-SCSHDRTARIWSMDRI--Q 493

Query: 294 TERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             R+      ++    + P+ + I   S     + + +      +  RI     +     
Sbjct: 494 PLRIMAGHLSDVDCVQWHPNCNYIATGSS---DKTVRLWDVQTGECVRIFIGHRSMVLSL 550

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             SP G  +A     G      +M  D    R +       +  WS
Sbjct: 551 AMSPDGRYMASGDEDGT-----IMMWDLLTARCITPLMGHNSCVWS 591



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 40/102 (39%), Gaps = 6/102 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + PN   +A  + D      V L D +     +     RSM+L+   S +G+    S  +
Sbjct: 510 WHPNCNYIATGSSDK----TVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMA-SGDE 564

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           D  + ++ + L +     L        S SYS + S +   S
Sbjct: 565 DGTIMMWDL-LTARCITPLMGHNSCVWSLSYSGEGSLLASGS 605


>gi|218440548|ref|YP_002378877.1| hypothetical protein PCC7424_3623 [Cyanothece sp. PCC 7424]
 gi|218173276|gb|ACK72009.1| hypothetical protein PCC7424_3623 [Cyanothece sp. PCC 7424]
          Length = 514

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 72/214 (33%), Gaps = 24/214 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             + D     P  S     + +++YD  +   ++  +        +I N       P  S
Sbjct: 129 LTNNDINDINPLIS--GNNIVWSSYDANNNYEIFFYN---GSQVIQITNNNIGDFNPEIS 183

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             G     S   +   +++  +   + T +LTN    + S   S   + I +        
Sbjct: 184 --GNNIAWSGYVNGNSEVFFYN--GSETIQLTNNDIDDYSPQIS--GNNIAWS-----TP 232

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
              +   NGS   +++ +   +     +S  GD + ++   G    I      GS+   L
Sbjct: 233 NKEIYLYNGSQIIQLA-NNYNNDLSLKFS--GDNLVWSGNDGNDNEIYFYN--GSEVIQL 287

Query: 387 VEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
             ++ + +    S  G ++++      D     Y
Sbjct: 288 SNNNIDDRVSQIS--GNTVLWVSDDGTDKNVYFY 319


>gi|195134897|ref|XP_002011873.1| GI14335 [Drosophila mojavensis]
 gi|193909127|gb|EDW07994.1| GI14335 [Drosophila mojavensis]
          Length = 470

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 38/103 (36%), Gaps = 4/103 (3%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +S D S +   S   G   + +   +    K + +          WSP  + I F     
Sbjct: 243 WSKDGSLLA--SSSIGDRAILIWHPDSKRVKPLKRLGPPGSLL-SWSPNNEWI-FAATVD 298

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             F +       + +R + +  N+QA  WSP  R L+F    D
Sbjct: 299 RVFRVWKCHNKWTSDRWVCDGGNVQACCWSPCSRFLLFVNTAD 341



 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 74/228 (32%), Gaps = 44/228 (19%)

Query: 202 NIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           N  Y       +     ++S +   +A ++  D  IL ++  D++  +  KR+G   S++
Sbjct: 225 NPSYTLKHPSNLPISSLKWSKDGSLLASSSIGDRAIL-IWHPDSKRVKPLKRLGPPGSLL 283

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S N +    +   D    ++    +  + +R         +  +SP S  ++F +
Sbjct: 284 ---SWSPNNEWI-FAATVDRVFRVWKCHNKWTS-DRWVCDGGNVQACCWSPCSRFLLFVN 338

Query: 321 DREGKEQLYVM--------------------------QSNGSDQKRISQDKEASYFDPVW 354
             +    LY +                            + S+Q  I      +    VW
Sbjct: 339 TAD--PILYRLQFVQLILMKSKADDKEVLPVADLNACSLDSSNQTFI----GGTAQQLVW 392

Query: 355 SPQGDLIAFTKFSGEKFAIGV-----MKKDGSQERLLVEDSNLQAPTW 397
            P G  +  T  S    AI            S    L   S  + P++
Sbjct: 393 DPHGKYVVITFKSTNSIAIFRTYIQKYDLQISGGYYLNGQSPSEYPSF 440


>gi|270339898|ref|ZP_06203472.1| OmpA family protein [Prevotella bergensis DSM 17361]
 gi|270333364|gb|EFA44150.1| OmpA family protein [Prevotella bergensis DSM 17361]
          Length = 694

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 65/188 (34%), Gaps = 31/188 (16%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQL 328
             +S + D+        +         NT     +AS+S D  ++      SD       
Sbjct: 207 IFMSEKDDKGKWSKPEPVTGGL-----NTPHEEGAASFSTDEREMYLTQCVSDPSYPRYA 261

Query: 329 YVMQSNGSDQK-------RISQDKEASYFDPVWSPQGDLIAFTKF---SGEKFAIGVMKK 378
            +++SN SD         +++ D  +SY  P  SP G  + F            I  ++ 
Sbjct: 262 QIVKSNRSDAAWSKATEVKLTNDTLSSYAHPAMSPDGQWLYFVSDMPGGKGGLDIWRVRI 321

Query: 379 D----GSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKLYSIDLNGRNE 428
                G  E L   +  + +   PT+ P+G  L FS       G     +  +  +GR  
Sbjct: 322 TPGGYGGVENLGAPINTEGDEMFPTFRPNGD-LYFSSNGHPGLGGLDVFIAKVGKDGRWS 380

Query: 429 TLINTPAY 436
             +  P Y
Sbjct: 381 --LAHPGY 386



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 46/143 (32%), Gaps = 20/143 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID----RAPKRIG---NFRS 258
           LT         P  SP+ Q + + +        + +   RI        + +G   N   
Sbjct: 281 LTNDTLSSYAHPAMSPDGQWLYFVSDMPGGKGGLDIWRVRITPGGYGGVENLGAPINTEG 340

Query: 259 MILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERLT------NTLFINISASY 309
             + P F  NG     S         +D++   +  +    L       N+   +   ++
Sbjct: 341 DEMFPTFRPNGD-LYFSSNGHPGLGGLDVFIAKVGKDGRWSLAHPGYPLNSPGDDFGLTF 399

Query: 310 SPDSSQIVFESDRE---GKEQLY 329
               ++  F S+R    G + +Y
Sbjct: 400 EGAHNRGFFSSNRNDARGWDHIY 422



 Score = 39.6 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 25/69 (36%), Gaps = 10/69 (14%)

Query: 383 ERLLVED--SNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLN----GRNETL---IN 432
           E  L  D  S+   P  SP G+ L F      G  G  ++ + +     G  E L   IN
Sbjct: 278 EVKLTNDTLSSYAHPAMSPDGQWLYFVSDMPGGKGGLDIWRVRITPGGYGGVENLGAPIN 337

Query: 433 TPAYASDPQ 441
           T      P 
Sbjct: 338 TEGDEMFPT 346


>gi|212533217|ref|XP_002146765.1| WD repeat protein [Penicillium marneffei ATCC 18224]
 gi|210072129|gb|EEA26218.1| WD repeat protein [Penicillium marneffei ATCC 18224]
          Length = 531

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 66/208 (31%), Gaps = 14/208 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              ++L     + +   RFSP++  +A           + + DT             + I
Sbjct: 173 YVQKHLLKGHLRGVSAVRFSPDRTMIA----SGGADGTLKVWDTLTGNLIHSFEGHLAGI 228

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               ++ + +    +   D+ + +++           +       S ++SP  + +   S
Sbjct: 229 STVAWAPDNETIA-TGSDDKTIRLWNALTGKAHPRAFSGHHNYVYSIAFSPKGNILASGS 287

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E +++     +   R                 G L+      G    I +     
Sbjct: 288 Y---DEAVFLWDIRTAKVMRSLPAHSDPVAGIDVCHDGTLVVSCSSDG---LIRIWDTMT 341

Query: 381 SQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
            Q  R LV + N  + A  +SP+ + ++
Sbjct: 342 GQCLRTLVHEDNPPVMAVRFSPNSKYVL 369



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 67/194 (34%), Gaps = 11/194 (5%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +G    R       + SG    +L V D    N+ +        +    ++P+ + +A  
Sbjct: 184 RGVSAVRFSPDRTMIASGGADGTLKVWDTLTGNLIHSFEGHLAGISTVAWAPDNETIATG 243

Query: 230 TYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           + D      + L +    +  P+      + + +  FS  G   L S   DEA+ ++  D
Sbjct: 244 SDDK----TIRLWNALTGKAHPRAFSGHHNYVYSIAFSPKGN-ILASGSYDEAVFLW--D 296

Query: 289 LQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +++    R L              D + +V  S  +G  +++     G   + +  +   
Sbjct: 297 IRTAKVMRSLPAHSDPVAGIDVCHDGTLVVSCSS-DGLIRIWDT-MTGQCLRTLVHEDNP 354

Query: 348 SYFDPVWSPQGDLI 361
                 +SP    +
Sbjct: 355 PVMAVRFSPNSKYV 368


>gi|195572099|ref|XP_002104034.1| GD18659 [Drosophila simulans]
 gi|194199961|gb|EDX13537.1| GD18659 [Drosophila simulans]
          Length = 332

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 225 KVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           K    T   +D+++V+ L +    +   ++      +++   SS+G+    S   D  M 
Sbjct: 53  KDFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIA-SSSLDSTMC 111

Query: 284 IYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++  D +S   + L N   ++  +  +SP +  ++     +GK  + +        ++  
Sbjct: 112 LW--DARSGHKKHLLNFGPVDLWTVQFSPCNKYVI-SGLNDGK--ISMYNVETGKAEQTL 166

Query: 343 QDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSP 399
             +   Y     +SP G  IA     G    I +      +    +E   +   +  +SP
Sbjct: 167 DAQNGKYTLSIAYSPDGKYIASGAIDG---IITIFDVAAGKVVQTLEGHAMPVRSLCFSP 223

Query: 400 SGRSLIFSRKKDGDTGSKLYSI 421
           +   L+ +     D   KLY +
Sbjct: 224 NSELLLTASD---DGHMKLYDV 242



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 64/185 (34%), Gaps = 20/185 (10%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   + L     +      +SP+ + +A    D      + + D    +  + +      
Sbjct: 160 GKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDG----IITIFDVAAGKVVQTLEGHAMP 215

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQI 316
           + +  FS N    L++   D  M +Y V   D+       L+      +  ++S D    
Sbjct: 216 VRSLCFSPN-SELLLTASDDGHMKLYDVTHSDVVGT----LSGHASWVLCVAFSEDGKHF 270

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIG 374
              S  +   +++    + S++K +    E +   +   +SP  D +A +    +   I 
Sbjct: 271 A-SSSSDNSVKIW----DTSERKCLHTFAEHTDQVWGVRYSPGNDKVA-SASEDKSLNIY 324

Query: 375 VMKKD 379
               +
Sbjct: 325 YCPPN 329


>gi|156552151|ref|XP_001605717.1| PREDICTED: similar to notchless homolog 1 (Drosophila) [Nasonia
           vitripennis]
          Length = 475

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 56/129 (43%), Gaps = 12/129 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                Q++ + +FSP+ + +A A++D      V L D+   +    +      + +  +S
Sbjct: 358 MTGHQQLINDVKFSPDGRLIASASFDK----SVKLWDSNTGKYITSLRGHVQAVYSVAWS 413

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
           ++  R L+S   D  + ++S+  ++    + L        +  ++PD  ++       GK
Sbjct: 414 AD-SRLLVSGSADSTLKVWSM--KTKQLSQDLPGHGDEVYAVDWAPDGIRVA----SGGK 466

Query: 326 EQLYVMQSN 334
           +++  +  N
Sbjct: 467 DKVLRLWQN 475



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 51/151 (33%), Gaps = 7/151 (4%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+  L+S   D  + ++  + +     R+T    +     +SPD   I   S     + +
Sbjct: 330 GEEKLVSGSDDFTLFLWKPEKEKKPLARMTGHQQLINDVKFSPDGRLIASASF---DKSV 386

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +  SN        +    + +   WS    L+  +  +     +  MK     + L   
Sbjct: 387 KLWDSNTGKYITSLRGHVQAVYSVAWSADSRLLV-SGSADSTLKVWSMKTKQLSQDLPGH 445

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
              + A  W+P G  +        D   +L+
Sbjct: 446 GDEVYAVDWAPDGIRVA---SGGKDKVLRLW 473



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 47/132 (35%), Gaps = 6/132 (4%)

Query: 232 DDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L     ++ P  R+   + +I   +FS +G+    S   D+++ ++  +  
Sbjct: 336 SGSDDFTLFLWKPEKEKKPLARMTGHQQLINDVKFSPDGRLIA-SASFDKSVKLWDSN-T 393

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 L   +    S ++S DS  +V  S       L V         +         +
Sbjct: 394 GKYITSLRGHVQAVYSVAWSADSRLLVSGS---ADSTLKVWSMKTKQLSQDLPGHGDEVY 450

Query: 351 DPVWSPQGDLIA 362
              W+P G  +A
Sbjct: 451 AVDWAPDGIRVA 462



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 60/196 (30%), Gaps = 24/196 (12%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +    FSPN Q +A  + D      V L D             +  +L   +
Sbjct: 108 TLEGHKEAVVSVAFSPNGQTLASGSGDT----TVRLWDVYTQTPTFTCTGHKHWVLCLAW 163

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN----TLFINISASY-----SPDSSQI 316
           S  G +   S  K+  + ++  D ++   ++L            S S+     +P+  ++
Sbjct: 164 SPCGTKVA-SACKNGRIILW--DPETG--KQLGKDMVGHKMWVTSLSWEPYHQNPECRRL 218

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +  S       L +  +       +      S     W   G  + ++        +   
Sbjct: 219 ISASK---DSDLRIWDTKLGQTLLVLAGHTKSVTCVKW--GGRGLIYSASQDRTIKVWRA 273

Query: 377 KKDGSQERLLVEDSNL 392
           + DG   R L    + 
Sbjct: 274 E-DGVLCRTLEGHGHW 288


>gi|308457374|ref|XP_003091070.1| CRE-TAF-5 protein [Caenorhabditis remanei]
 gi|308258524|gb|EFP02477.1| CRE-TAF-5 protein [Caenorhabditis remanei]
          Length = 647

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 60/173 (34%), Gaps = 11/173 (6%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D +   + D +  ++  R       + +  FS + +R L+S   D+ + ++S+D Q N  
Sbjct: 370 DNVHAQMFDLQGSQSSVRYTGHGGPVFSVNFSPD-RRLLLSSSGDKTIRLWSMDAQRNVV 428

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             +     +   A +          S     + + +  ++     R+  D         +
Sbjct: 429 --IYRCPAMVWQAQFCNRGYYFATAS---ADKTVSMWSTDRMTPLRMFPDAYGDVSCIDY 483

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
            P  + IA      +   + V          L     + + +  +SP GR ++
Sbjct: 484 HPNCNYIA---GGSDDRYVRVWDVCSGTRVRLFGGHKAAIISVKFSPCGRYIV 533



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 85/229 (37%), Gaps = 15/229 (6%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D  G+            +F   FSP+++ +  ++ D    +R++ MD + +    R  
Sbjct: 376 MFDLQGSQSSVRYTGHGGPVFSVNFSPDRRLLLSSSGD--KTIRLWSMDAQRNVVIYRC- 432

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDS 313
              +M+   +F + G     +   D+ + ++S D  +    R+    + ++S   Y P+ 
Sbjct: 433 --PAMVWQAQFCNRGYYFA-TASADKTVSMWSTDRMT--PLRMFPDAYGDVSCIDYHPNC 487

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           + I   SD      + V       + R+    +A+     +SP G  I      G     
Sbjct: 488 NYIAGGSD---DRYVRVWDVCSGTRVRLFGGHKAAIISVKFSPCGRYIVSLDIIGNLMVW 544

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +  +      +  +       +++  G     S    G+   +LYS+D
Sbjct: 545 DLAYQRLVAAEVTEQKGTKGHISFTRDGGVFAVS---HGNANIQLYSLD 590


>gi|298251955|ref|ZP_06975758.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297546547|gb|EFH80415.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 551

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 67/215 (31%), Gaps = 41/215 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALIS 275
            +SP+   +A + +  E+   ++++        K +  +     A    +S +G+   + 
Sbjct: 335 AWSPDGTALATSKFISENQAVLFVLRA---SDLKPLTTYPLSDTARTMAWSGDGQMLAVI 391

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLF-------------INISASYSPDSSQIVFESDR 322
             + +  DI      S   +  T                      +++ DS ++   S  
Sbjct: 392 TDQVDVWDI------SRGKKIWTYQPPRYSVISETEKFRMNVSDVAWASDSRRLA-ISLS 444

Query: 323 EGKEQ---------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            G            + +     + Q    Q    S     WSP    IA    +G  + +
Sbjct: 445 AGIPGDGFAGQPSPVLIWDIAANRQVCSCQGHWGSSNGLAWSPDDSRIA---AAGSDWTV 501

Query: 374 GVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLI 405
            V        +LL    +   + +  WSP G  L 
Sbjct: 502 QVWNAQTG-AQLLTYQGHRDTIWSVAWSPDGNFLA 535



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/71 (15%), Positives = 23/71 (32%), Gaps = 5/71 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+  ++A           V + + +           R  I +  +S +G     S  
Sbjct: 484 AWSPDDSRIA----AAGSDWTVQVWNAQTGAQLLTYQGHRDTIWSVAWSPDGNFLA-SGS 538

Query: 278 KDEAMDIYSVD 288
            D  + I+   
Sbjct: 539 ADHTIQIWEAP 549



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/211 (11%), Positives = 58/211 (27%), Gaps = 26/211 (12%)

Query: 219 FSPNQQKVA--------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +S +   +                 ++R Y+     +       N     +A   S +G+
Sbjct: 236 WSSDNTSLVECLSGVLHSWKIATGQVMRTYISPPSPNDDIFGKTNKSFNNIA--LSPDGR 293

Query: 271 RALISVQKDEAMDIYSVDLQSNATER---LTNTLFIN---ISASYSPDSSQIVFESDREG 324
               +V  D  + I+      +  +R   +     +       ++SPD + +        
Sbjct: 294 WIAAAVNADG-VSIWEA-ASGHFVQRFAPVEQHQSLGEFYGGVAWSPDGTALATSKFISE 351

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKK 378
            + +  +      +   +     +     WS  G ++A      + +       I   + 
Sbjct: 352 NQAVLFVLRASDLKPLTTYPLSDTARTMAWSGDGQMLAVITDQVDVWDISRGKKIWTYQP 411

Query: 379 DGSQERLLVEDSNLQA--PTWSPSGRSLIFS 407
                    E   +      W+   R L  S
Sbjct: 412 PRYSVISETEKFRMNVSDVAWASDSRRLAIS 442


>gi|242215875|ref|XP_002473749.1| predicted protein [Postia placenta Mad-698-R]
 gi|242223192|ref|XP_002477258.1| predicted protein [Postia placenta Mad-698-R]
 gi|220723317|gb|EED77545.1| predicted protein [Postia placenta Mad-698-R]
 gi|220727144|gb|EED81073.1| predicted protein [Postia placenta Mad-698-R]
          Length = 377

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 68/205 (33%), Gaps = 13/205 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++P  ++V   +   E      L +         +    + +   RF+ +G     S  
Sbjct: 83  TWTPEGRRVLTGSTSGEFT----LWNGLTFNFETILQAHDTAVRTMRFTHSGAYLA-SAD 137

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +   +  +  ++  N     T         S+SPD  +    SD      + +     S 
Sbjct: 138 QSGIIKYFQPNM--NNLTAWTGHREAIRGLSFSPDDQRFATASD---DSTVRIWSFEESR 192

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPT 396
           ++R+            W P   L+A    S +        + G+    L    + +QA T
Sbjct: 193 EERVLTGHGWDVKCVEWHPTKGLLA--SGSKDNMIKFWDPRTGTVLSTLHYHKNTVQALT 250

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
           WSP+G  L  + +        + ++
Sbjct: 251 WSPNGNLLASASRDQTVRVFDIRAM 275



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 68/221 (30%), Gaps = 17/221 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             V++G       + +    N   +  + D  +   RF+ +    AY    D+  +  Y 
Sbjct: 89  RRVLTGSTSGEFTLWNGLTFNFETILQAHDTAVRTMRFTHSG---AYLASADQSGIIKYF 145

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                +         R  I    FS + +R   +   D  + I+S + +S     LT   
Sbjct: 146 QPNMNNL--TAWTGHREAIRGLSFSPDDQRFA-TASDDSTVRIWSFE-ESREERVLTGHG 201

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +      + P    +   S       +                 + +     WSP G+L+
Sbjct: 202 WDVKCVEWHPTKGLLASGSK---DNMIKFWDPRTGTVLSTLHYHKNTVQALTWSPNGNLL 258

Query: 362 AFTKFSG--EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
           A          F I  MK    + R+L      + +  W P
Sbjct: 259 ASASRDQTVRVFDIRAMK----EFRVLKGHKKEVCSVAWHP 295


>gi|172036548|ref|YP_001803049.1| hypothetical protein cce_1633 [Cyanothece sp. ATCC 51142]
 gi|171698002|gb|ACB50983.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 499

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 48/277 (17%), Positives = 90/277 (32%), Gaps = 47/277 (16%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I +     K  +  R L  + +       N    +D    N++          F   FS 
Sbjct: 85  IIEPPLPGKIAWQGRTLIYTLNDPPIYGTNYRIKLD----NVQPSYKDETLQSFVSLFST 140

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS--SNGKRALISVQKD 279
             +  AY   + E+  R+ L +      P++I      ++   F    N ++ L S    
Sbjct: 141 RDRVFAYIGIEGEEKGRLILYNITNLDKPQKIILTPGDLVVTNFEIYPNSEKILFSA--- 197

Query: 280 EAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                +  D++     R    T T   N+  S +P        S R GK           
Sbjct: 198 -----FEPDIRGQGLVRQELYTVTTGFNVDPSITP--------SQRAGK----------- 233

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAF---TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             KRI   +E        S  G +I     +  +    ++ ++ +D     L +  S   
Sbjct: 234 -LKRILDSQEYRNVSFDLSKNGKVIVIERESHRNSNDSSLWIITEDNKPISLGIPGSEF- 291

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
               +P G+ L  +++     G ++  +  NG    +
Sbjct: 292 --VIAPDGKRLAVAQQ----GGVRMVPLGSNGGTSRI 322


>gi|15991570|gb|AAL12938.1|AF394228_1 putative transcriptional regulator WmpR [Pseudoalteromonas
           tunicata]
          Length = 696

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 62/207 (29%), Gaps = 14/207 (6%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINIS 306
             + +       +A   S++G     S Q  +     IY           +T+   +  S
Sbjct: 177 QTQVVNTLPGDKIAVTQSADGSYLAFSGQVHDESGFQIYVKHQSDFDFRPITHHAHLPSS 236

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--- 363
            ++S D+  + F    +    L  ++ +G +++             V++ +     F   
Sbjct: 237 IAFSFDNKSLYFSDTSKINSSLNQIKLDGENREIEILVDNYFLISDVFTARTSNNVFFAA 296

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGSK 417
            K +   F I            +   S  ++       ++   G  L   R        +
Sbjct: 297 KKSTEGPFLIYEYDVVNKAVTAITASSQAESLDIKGDVSF--DGSKLAVLRTNRLSHSDE 354

Query: 418 LYSIDLNGRN-ETLINTPAYASDPQWV 443
           +  IDL  +        PA   D  W 
Sbjct: 355 IRVIDLKTKEVVIRRQHPARVYDVAWG 381



 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 83/222 (37%), Gaps = 20/222 (9%)

Query: 220 SPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--V 276
           S +   +A++    DE   ++Y+   + D   + I +   +  +  FS + K    S   
Sbjct: 194 SADGSYLAFSGQVHDESGFQIYVKH-QSDFDFRPITHHAHLPSSIAFSFDNKSLYFSDTS 252

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQS 333
           + + +++   +D ++   E L +  F+ IS  ++  +S  VF +     EG   +Y    
Sbjct: 253 KINSSLNQIKLDGENREIEILVDNYFL-ISDVFTARTSNNVFFAAKKSTEGPFLIYEYDV 311

Query: 334 NGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERL-LVE 388
                  I+   +A   D     S  G  +A  + +       I V+     +  +    
Sbjct: 312 VNKAVTAITASSQAESLDIKGDVSFDGSKLAVLRTNRLSHSDEIRVIDLKTKEVVIRRQH 371

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            + +    W  +   LI SR        +L  I++    ETL
Sbjct: 372 PARVYDVAWGDNNNLLILSR-------GQLLKINIATSEETL 406


>gi|88860692|ref|ZP_01135329.1| putative transcriptional regulator [Pseudoalteromonas tunicata D2]
 gi|88817287|gb|EAR27105.1| putative transcriptional regulator [Pseudoalteromonas tunicata D2]
          Length = 709

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 62/207 (29%), Gaps = 14/207 (6%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINIS 306
             + +       +A   S++G     S Q  +     IY           +T+   +  S
Sbjct: 190 QTQVVNTLPGDKIAVTQSADGSYLAFSGQVHDESGFQIYVKHQSDFDFRPITHHAHLPSS 249

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--- 363
            ++S D+  + F    +    L  ++ +G +++             V++ +     F   
Sbjct: 250 IAFSFDNKSLYFSDTSKINSSLNQIKLDGENREIEILVDNYFLISDVFTARTSNNVFFAA 309

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGSK 417
            K +   F I            +   S  ++       ++   G  L   R        +
Sbjct: 310 KKSTEGPFLIYEYDVVNKAVTAITASSQAESLDIKGDVSF--DGSKLAVLRTNRLSHSDE 367

Query: 418 LYSIDLNGRN-ETLINTPAYASDPQWV 443
           +  IDL  +        PA   D  W 
Sbjct: 368 IRVIDLKTKEVVIRRQHPARVYDVAWG 394



 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 83/222 (37%), Gaps = 20/222 (9%)

Query: 220 SPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--V 276
           S +   +A++    DE   ++Y+   + D   + I +   +  +  FS + K    S   
Sbjct: 207 SADGSYLAFSGQVHDESGFQIYVKH-QSDFDFRPITHHAHLPSSIAFSFDNKSLYFSDTS 265

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQS 333
           + + +++   +D ++   E L +  F+ IS  ++  +S  VF +     EG   +Y    
Sbjct: 266 KINSSLNQIKLDGENREIEILVDNYFL-ISDVFTARTSNNVFFAAKKSTEGPFLIYEYDV 324

Query: 334 NGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERL-LVE 388
                  I+   +A   D     S  G  +A  + +       I V+     +  +    
Sbjct: 325 VNKAVTAITASSQAESLDIKGDVSFDGSKLAVLRTNRLSHSDEIRVIDLKTKEVVIRRQH 384

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            + +    W  +   LI SR        +L  I++    ETL
Sbjct: 385 PARVYDVAWGDNNNLLILSR-------GQLLKINIATSEETL 419


>gi|302906413|ref|XP_003049475.1| hypothetical protein NECHADRAFT_45248 [Nectria haematococca mpVI
           77-13-4]
 gi|256730410|gb|EEU43762.1| hypothetical protein NECHADRAFT_45248 [Nectria haematococca mpVI
           77-13-4]
          Length = 629

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 55/155 (35%), Gaps = 16/155 (10%)

Query: 265 FSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           F+ +GK         +   +D Y+VDL + A  RLT+         +SPDS  +V    R
Sbjct: 286 FTGDGKEVTYVGYPSESSNIDAYAVDLTTGAVRRLTSHPEYIDPLDFSPDSQWLVAIDTR 345

Query: 323 EGKEQLY---------VMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKF 371
               Q++         +     +     +++     F   +     GD   +        
Sbjct: 346 GTDRQMWLSGMRHIPPITDLVSTSVTSATRNNGRRRFFRPYLLDKYGDRGDYYGQRLNGQ 405

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
             GV    GS +    E +    P WSP G  +++
Sbjct: 406 GSGV---AGSGDYNDPEWNARADPRWSPDGTQVVW 437


>gi|291300425|ref|YP_003511703.1| WD-40 repeat protein [Stackebrandtia nassauensis DSM 44728]
 gi|290569645|gb|ADD42610.1| WD-40 repeat protein [Stackebrandtia nassauensis DSM 44728]
          Length = 403

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 50/116 (43%), Gaps = 5/116 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD   +   S      QL+    +  +  ++++ K  S     +SP G L+A    +
Sbjct: 120 TFSPDGKLLATGSGYSRNTQLW--DVDTGE--QVAELKGTSPCAQEFSPDGKLLATGGCA 175

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           GE+  + +       +   +  ++ +   +SP G++L  +   +   G +L+ +  
Sbjct: 176 GEETGVQLWDVRTEDKIATITKNDSEDLAFSPDGKTLA-TIGNNPHDGLRLWEVST 230



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/311 (14%), Positives = 102/311 (32%), Gaps = 40/311 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+++  G        +LWDV   +Q+   K  S        A   S D            
Sbjct: 125 GKLLATGSG-YSRNTQLWDVDTGEQVAELKGTSP------CAQEFSPD------------ 165

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                 +  +      +  + + D    +        D       FSP+ + +A    + 
Sbjct: 166 ----GKLLATGGCAGEETGVQLWDVRTEDKIATITKNDSEDL--AFSPDGKTLATIGNNP 219

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQ 290
            D LR++ + T  +     + +     +   FS +     ++  + +  D +     D++
Sbjct: 220 HDGLRLWEVSTGDEIMHLDMED----AIDFTFSPDSATFAVTPSRADLDDPFRAELWDMR 275

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           S    ++++      + +YSPD   ++  S      +  V   +  D  R+        F
Sbjct: 276 SGD--KISSFTVNGGTVTYSPDGKTLITASCGGTVSRWEVRTGDKVDSHRL-----VDCF 328

Query: 351 DPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           D  +S    ++A       E     +   +     L +         +S +G+++  +  
Sbjct: 329 DLSFSSDSKVLAIVNLEFEEPPGTTLWSVETGDRLLTLSTQEAYHVAFSTTGKAVAVNTS 388

Query: 410 KDGDTGSKLYS 420
            + +T  ++  
Sbjct: 389 LEANTHDEIVL 399



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 64/194 (32%), Gaps = 15/194 (7%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--- 307
           +R  +    + A  FS +GK             ++  D+ +   E++        S    
Sbjct: 107 ERTLDPPETLNALTFSPDGKLLATGSGYSRNTQLW--DVDTG--EQVAELKG--TSPCAQ 160

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD   +        +  + +      D+  I+   +    D  +SP G  +A    +
Sbjct: 161 EFSPDGKLLATGGCAGEETGVQLWDVRTEDK--IATITKNDSEDLAFSPDGKTLATIGNN 218

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK---DGDTGSKLYSIDLN 424
                + + +     E + ++  +    T+SP   +   +  +   D    ++L+ +   
Sbjct: 219 PHD-GLRLWEVSTGDEIMHLDMEDAIDFTFSPDSATFAVTPSRADLDDPFRAELWDMRSG 277

Query: 425 GRNETLINTPAYAS 438
            +  +        +
Sbjct: 278 DKISSFTVNGGTVT 291


>gi|20090753|ref|NP_616828.1| hypothetical protein MA1904 [Methanosarcina acetivorans C2A]
 gi|19915811|gb|AAM05308.1| hypothetical protein MA_1904 [Methanosarcina acetivorans C2A]
          Length = 1698

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 65/206 (31%), Gaps = 10/206 (4%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N    T            SP+ + +  A      I  +      +    K   N   + 
Sbjct: 129 TNAVTATVPAGSSPQGIAVSPDGKTIYVANLAGNSISVIDTTSNTVVSTVKTGRNPTGV- 187

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                S +GK+  ++  +D+ + I  +D  +       +        + +PD +++   +
Sbjct: 188 ---AVSPDGKKVYVTNSEDKTVSI--IDTATKVVISTVSVGKDPREIAVTPDGAKVYVAN 242

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              G   + V+  + +     +   E + F    +P G  +  T +      + V+    
Sbjct: 243 SDSGT--VSVIDVSTNSVTD-TVKVEGAPFGVAVTPDGAKVYVTNYDQYFSTVAVIDVAT 299

Query: 381 SQERLLVE-DSNLQAPTWSPSGRSLI 405
           ++    +    +      +P G  + 
Sbjct: 300 NKVTATIPVGPDPVGVAVTPDGTKVY 325



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 63/178 (35%), Gaps = 12/178 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S  G      +  +E+  I  +D+ +N            +  + +PD +++   +D   
Sbjct: 61  VSIAGASPFAYITNEESNSISVIDVSTNKVAATIPVGSNPVGVAINPDGTKVYVANDHS- 119

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + V+ +  +     +    +S      SP G  I     +G   +I V+    +   
Sbjct: 120 -NDVSVIDTATNAVTA-TVPAGSSPQGIAVSPDGKTIYVANLAGN--SISVIDTTSNTVV 175

Query: 385 LLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
             V+   N      SP G+ +  +  +D           ++   + +I+T +   DP+
Sbjct: 176 STVKTGRNPTGVAVSPDGKKVYVTNSEDKTVSI------IDTATKVVISTVSVGKDPR 227



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 67/201 (33%), Gaps = 19/201 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISV 276
           SP+  ++            V ++DT ++     +        +P     + +GK+  ++ 
Sbjct: 495 SPDGTRIYVTNSFYNYRGTVSVIDTALNEVIATV--DIGDKYSPCGIAVTPDGKKLYVAN 552

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +  + + +    + +      T  + IN +  + +PD ++ V+ ++R     + V+ +  
Sbjct: 553 RDIDGVSVIDTSINTVIA---TIPVGINPLGVAANPDGTK-VYVTNR-YSNNVSVIDTAT 607

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +      +         V + +G  +          +I     D               P
Sbjct: 608 NKVVATVKTGSGPCGITV-NQEGTNLYVANCENNTISI----IDTGSNTATASVPAGTWP 662

Query: 396 ---TWSPSGRSLIFSRKKDGD 413
                SP G  +  + ++  +
Sbjct: 663 MGVAVSPDGTKVYVANERSNN 683


>gi|332667718|ref|YP_004450506.1| WD40 repeat-containing protein [Haliscomenobacter hydrossis DSM
           1100]
 gi|332336532|gb|AEE53633.1| WD40 repeat-containing protein [Haliscomenobacter hydrossis DSM
           1100]
          Length = 590

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 69/194 (35%), Gaps = 13/194 (6%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E+  F+  +      +++G       +    GAN      +  + +     SP+ +   
Sbjct: 239 SEQAVFDGAMASSGGKLLAGTTSGKAWLWVP-GANAAVPVNAHPEAILATSASPDGK--Y 295

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           + T   ++  R++   +      +        +    FS +G+  L +   D ++ ++  
Sbjct: 296 WLTASRDNNTRLW---SAEGSLLRTFEGHTGNVYGAIFSPDGQNML-TRSSDGSLRLW-- 349

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           ++ S +   L N    +    +S   S+I+  +  +GK  LY   S G+    ++     
Sbjct: 350 NVSSGSPTLLPNPPLYSYDVLFSVSGSKIL-AAGHDGK--LYRWNSQGNALLALA-LHRG 405

Query: 348 SYFDPVWSPQGDLI 361
                  SP    I
Sbjct: 406 PIRQLSLSPNQQYI 419



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 39/117 (33%), Gaps = 13/117 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD       + R+   +L+   S      R  +    + +  ++SP G  +      G 
Sbjct: 290 SPDGKY-WLTASRDNNTRLW---SAEGSLLRTFEGHTGNVYGAIFSPDGQNMLTRSSDGS 345

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              + +         LL           +S SG  ++ +   DG    KLY  +  G
Sbjct: 346 ---LRLWNVSSGSPTLLPNPPLYSYDVLFSVSGSKIL-AAGHDG----KLYRWNSQG 394


>gi|302678009|ref|XP_003028687.1| hypothetical protein SCHCODRAFT_70053 [Schizophyllum commune H4-8]
 gi|300102376|gb|EFI93784.1| hypothetical protein SCHCODRAFT_70053 [Schizophyllum commune H4-8]
          Length = 449

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/247 (17%), Positives = 83/247 (33%), Gaps = 29/247 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           FS + + +A        I  V     T          N    I +  FS +GK    +  
Sbjct: 148 FSADGKYLATGCNRKAQIFDVKTGHKTAEFLDKNANANGDLYIRSVCFSPDGKYLA-TGA 206

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLY-VMQSNG 335
           +D+ + ++  D+      ++         S  +S +   IV  S  +   +++ +   + 
Sbjct: 207 EDKLIRLW--DIAKGRIRQVFEGHQQEIYSLVFSHNGKLIVSGSG-DKTARIWDISDPSN 263

Query: 336 SDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVED 389
           +    I    +   EA       SP G L+A          + +      Q  ERL    
Sbjct: 264 NKVLAINEPDTLTTEAGVTSVAISPDGRLVAAGSLDT---VVRIWDVATGQLLERLRGHR 320

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------------TPAY 436
            ++ +  ++P GR LI            +  +   G++  +++             + A 
Sbjct: 321 DSVYSVRFTPDGRGLISGSLDKTLKYWDITPVTSAGKHREMVHCTMSFAGHKDYVLSVAV 380

Query: 437 ASDPQWV 443
           + D QWV
Sbjct: 381 SPDGQWV 387



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/177 (14%), Positives = 59/177 (33%), Gaps = 19/177 (10%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYS 310
             S++   +FS++GK       +     I+ V       E L      N      S  +S
Sbjct: 139 HPSVVCCVQFSADGKYLATGCNR--KAQIFDVKTGHKTAEFLDKNANANGDLYIRSVCFS 196

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +   ++    + + +        +++ +  +   +  V+S  G LI         
Sbjct: 197 PDGKYLATGAE---DKLIRLWDIAKGRIRQVFEGHQQEIYSLVFSHNGKLIVSGSGDKTA 253

Query: 371 FAIGVMKKDG------SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +           ++   L  ++ + +   SP GR +        DT  +++ +
Sbjct: 254 RIWDISDPSNNKVLAINEPDTLTTEAGVTSVAISPDGRLVAAGSL---DTVVRIWDV 307



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 72/212 (33%), Gaps = 43/212 (20%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWD+   +  I + F                +IY  +    G      L VS S    
Sbjct: 211 IRLWDIAKGR--IRQVFEGHQQ-----------EIYSLVFSHNG-----KLIVSGSGDKT 252

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPR------FSPNQQKVAYATYDDEDILRVYL 241
                +     D +N + L  +    L           SP+ + VA  + D      V +
Sbjct: 253 ARIWDI----SDPSNNKVLAINEPDTLTTEAGVTSVAISPDGRLVAAGSLDT----VVRI 304

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATER---- 296
            D    +  +R+   R  + + RF+ +G R LIS   D+ +  + +  + S    R    
Sbjct: 305 WDVATGQLLERLRGHRDSVYSVRFTPDG-RGLISGSLDKTLKYWDITPVTSAGKHREMVH 363

Query: 297 ----LTNTLFINISASYSPDSSQIVFES-DRE 323
                       +S + SPD   +V  S DR 
Sbjct: 364 CTMSFAGHKDYVLSVAVSPDGQWVVSGSKDRS 395


>gi|254413976|ref|ZP_05027744.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
 gi|196179112|gb|EDX74108.1| tetratricopeptide repeat domain protein [Microcoleus chthonoplastes
           PCC 7420]
          Length = 945

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 10/140 (7%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D+ G N+  L    +  +    FSP+  ++  A+YD        L D + +      G
Sbjct: 1   MWDKSG-NLLALFRGHENAVTSAVFSPDGSQILTASYDG----SARLWDAKGNLLVVFQG 55

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +  S+  A  FS +G + L +   D  + ++  D + N          +  +A +SPD S
Sbjct: 56  HEESVESA-VFSLDGSQIL-TASWDGTVRLW--DTKGNLLAVFQGHDAMVNNAVFSPDGS 111

Query: 315 QIVFESDREGKEQLYVMQSN 334
           QI+  + R+G  +L+ + + 
Sbjct: 112 QIL-TASRDGTARLWDVSAA 130



 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 10/127 (7%)

Query: 246 IDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            D++   +  FR     + +  FS +G + L +   D +  ++  D + N          
Sbjct: 2   WDKSGNLLALFRGHENAVTSAVFSPDGSQIL-TASYDGSARLW--DAKGNLLVVFQGHEE 58

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              SA +S D SQI+  +  +G  +L+       +   + Q  +A   + V+SP G  I 
Sbjct: 59  SVESAVFSLDGSQIL-TASWDGTVRLW---DTKGNLLAVFQGHDAMVNNAVFSPDGSQIL 114

Query: 363 FTKFSGE 369
                G 
Sbjct: 115 TASRDGT 121



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 11/120 (9%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            SA +SPD SQI+  S  +G  +L+       +   + Q  E S    V+S  G  I   
Sbjct: 20  TSAVFSPDGSQILTASY-DGSARLW---DAKGNLLVVFQGHEESVESAVFSLDGSQILTA 75

Query: 365 KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            + G    + +    G+   +    D+ +    +SP G  ++ + +   D  ++L+ +  
Sbjct: 76  SWDGT---VRLWDTKGNLLAVFQGHDAMVNNAVFSPDGSQILTASR---DGTARLWDVSA 129


>gi|121702333|ref|XP_001269431.1| chromosome segregation protein (SepB), putative [Aspergillus
           clavatus NRRL 1]
 gi|119397574|gb|EAW08005.1| chromosome segregation protein (SepB), putative [Aspergillus
           clavatus NRRL 1]
          Length = 861

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 67/209 (32%), Gaps = 23/209 (11%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + VA A+    D L V L++       K + +         F  NG+   +S   D  
Sbjct: 108 DGEWVAVAS----DELTVKLVNIENMTIVKYLRDQAKGTKHVSFDPNGRYIAVSCT-DGL 162

Query: 282 MDIYSVDLQ--------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           + IYS                 RL           + PD +   F S    ++      S
Sbjct: 163 VYIYSSFSDEPELVRKLDGVIRRLEPEDEATSRIVWHPDGT--AFASAEATRDVAIYSVS 220

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
               +K  S           WSP G L+A    +G    I + +    +     +  N+ 
Sbjct: 221 EWKKEKVFSGGHNGDITSVSWSPNGALLA---TAGADGQILIWETKTQKVLHRYDFGNVI 277

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              W PS  SL F+         +L+  D
Sbjct: 278 NLAWHPSKNSLSFTTSDG-----ELFIYD 301


>gi|85373170|ref|YP_457232.1| dipeptidyl aminopeptidase [Erythrobacter litoralis HTCC2594]
 gi|84786253|gb|ABC62435.1| dipeptidyl aminopeptidase [Erythrobacter litoralis HTCC2594]
          Length = 654

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 3/97 (3%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---KKDGSQERLLVEDSNLQAP 395
           +R       +      SP G  +++         I +      + ++      D  ++  
Sbjct: 12  RREHLFGNPTRAAGQISPDGQWLSWLAPRDGVLNIWMAPSEDPEAAKPMSASTDRPIREY 71

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            W+P  RSL++ + K GD    LY ID+    ET + 
Sbjct: 72  MWAPDSRSLLYIQDKGGDENFLLYGIDVEAGKETSLT 108



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 34/81 (41%), Gaps = 3/81 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD   + + + R+G   +++  S +    K +S   +    + +W+P    + + +  G
Sbjct: 28  SPDGQWLSWLAPRDGVLNIWMAPSEDPEAAKPMSASTDRPIREYMWAPDSRSLLYIQDKG 87

Query: 369 E--KFAIGVMKKDGSQERLLV 387
               F +  +  +  +E  L 
Sbjct: 88  GDENFLLYGIDVEAGKETSLT 108



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 46/133 (34%), Gaps = 11/133 (8%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISASYSPDSSQIVFESD 321
           S +G+       +D  ++I+    +     +     T+         ++PDS  +++  D
Sbjct: 28  SPDGQWLSWLAPRDGVLNIWMAPSEDPEAAKPMSASTDRPIREYM--WAPDSRSLLYIQD 85

Query: 322 REGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSP---QGDLIAFTKFSGEKFAIGVM 376
           + G E   LY +      +  ++   +        S       LI           + ++
Sbjct: 86  KGGDENFLLYGIDVEAGKETSLTPFDDTRVMLVGGSDTYKDRILIGLNNRDARFHDVHLL 145

Query: 377 KKDGSQERLLVED 389
             +  +  L++++
Sbjct: 146 DLNTGELTLVLQN 158


>gi|171912301|ref|ZP_02927771.1| hypothetical protein VspiD_14015 [Verrucomicrobium spinosum DSM
           4136]
          Length = 486

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 46/294 (15%), Positives = 90/294 (30%), Gaps = 54/294 (18%)

Query: 187 GIIKNSLCVMDRD----GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           G + + +CV+D      G     +     + L  P+ S     VA+    +ED      +
Sbjct: 182 GQVVHEICVVDLKTVKPGGPEPRVLLRSLRDLTSPKVSSRHATVAFLRMMEEDESASLEV 241

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS-------VDLQS---N 292
                  P  +     +     +S NG+  + +        +         +D +    +
Sbjct: 242 CALKGGEPTVLAQQVGLSF--DWSPNGRSLVYTTAFSGTGSVMRRVHRVTALDEKGEVAS 299

Query: 293 ATERLT-NTLFINISASYS-----PDSSQIV----FESDREGKE-----QLYVMQSNGSD 337
              R T   L + +  S +     PD   ++          G E     +LY++  +G  
Sbjct: 300 EETRGTVENLALAVMPSPNRVQNLPDGRVLISALPLTLPMAGTEPEVESRLYIISVDGKT 359

Query: 338 QKRISQ---DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              +              V SP G  +A     G   A+ V++ D  +  ++        
Sbjct: 360 LTPVPTAPGGLPGDLGYFVVSPDGKRVAVA--EGGSDAVAVVELDSGKTTMVSPAHPNWQ 417

Query: 395 ----PTW---------SPSG-----RSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
               P W         +  G     R +I+S +    + S  +S +       L
Sbjct: 418 CRTLPAWKSATELTFAALDGSPAAPRWMIWSEESGTRSLSASWSAEATAEWLEL 471



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 86/263 (32%), Gaps = 44/263 (16%)

Query: 220 SPNQQKVAYATYDDEDILRVY---LMDTRI----DRAPKRIGNFRSMILAPRFSSNGKRA 272
           SP  Q++      ++    V+   ++D +        P+ +      + +P+ SS     
Sbjct: 166 SPAGQELIKQLQQEKIGQVVHEICVVDLKTVKPGGPEPRVLLRSLRDLTSPKVSSRHATV 225

Query: 273 LI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE---- 326
                +++DE+  +    L+      L   + +  S  +SP+   +V+ +   G      
Sbjct: 226 AFLRMMEEDESASLEVCALKGGEPTVLAQQVGL--SFDWSPNGRSLVYTTAFSGTGSVMR 283

Query: 327 ---QLYVMQSNG---SDQKRISQDKEASYFDPVWS-----PQGDLIA--------FTKFS 367
              ++  +   G   S++ R + +  A    P  +     P G ++              
Sbjct: 284 RVHRVTALDEKGEVASEETRGTVENLALAVMPSPNRVQNLPDGRVLISALPLTLPMAGTE 343

Query: 368 GE-KFAIGVMKKDGSQERLLVE-----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            E +  + ++  DG     +         +L     SP G+ +  +  + G     +  +
Sbjct: 344 PEVESRLYIISVDGKTLTPVPTAPGGLPGDLGYFVVSPDGKRVAVA--EGGSDAVAVVEL 401

Query: 422 DLNGRNETLINTPAYASD--PQW 442
           D           P +     P W
Sbjct: 402 DSGKTTMVSPAHPNWQCRTLPAW 424


>gi|53711376|ref|YP_097368.1| dipeptidyl peptidase IV [Bacteroides fragilis YCH46]
 gi|52214241|dbj|BAD46834.1| dipeptidyl peptidase IV [Bacteroides fragilis YCH46]
          Length = 719

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 49/270 (18%), Positives = 97/270 (35%), Gaps = 58/270 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRI-----------------------DRAPKRIGN 255
           +SP+   +A+   D   + +  L+D  +                          P    +
Sbjct: 200 WSPSGNLLAFYRMDQSMVAQYPLVDVTVPIAEVNNIRYPMAGMTSHQVKVGIYNPTTGKS 259

Query: 256 FRSMILAP--------RFSSNGKRA-LISVQKDEA-MDIYSVDLQSNATERLTNTLFIN- 304
                  P         ++ + K   LI + +D+    +   D+++     LT TLF   
Sbjct: 260 IYLNAGDPTDRYFTNISWAPDEKSLYLIELNRDQNHAKLCRYDVETGE---LTATLFEEK 316

Query: 305 ----ISAS----YSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
               +       + P DSS+ +++S ++G   LY+  +NG   +++++         V  
Sbjct: 317 SDKYVEPQDPIIFLPWDSSKFIYQSQKDGFSHLYLYDTNGRQIRQLTEGD--WLVKEVLG 374

Query: 356 PQGDL----IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                    IA T+FS  +  +  +         L     + +   SPSGR LI  +   
Sbjct: 375 FDTKKKEIIIASTEFSPLQNNLFRLDTKTGIRTPLGSAEGVHSGQLSPSGRYLI-DQYNS 433

Query: 412 GDTGSKLYSIDL-NGRNETLINTPAYASDP 440
                 +  ID+ +G++  L+     A+DP
Sbjct: 434 PTVPRSINIIDVQSGKSVNLLT----AADP 459


>gi|307209232|gb|EFN86339.1| Notchless protein-like protein 1 [Harpegnathos saltator]
          Length = 420

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 58/129 (44%), Gaps = 12/129 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                Q++ + +FSPN + +A A++D      + L ++   +    +      + +  +S
Sbjct: 303 MTGHQQLINDVKFSPNGRVIASASFDK----SIKLWESTTGKFIASLRGHVQAVYSIAWS 358

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
           ++  R L+S  KD  + ++S+  ++   ER L        +  +SPD  ++       GK
Sbjct: 359 AD-SRLLVSGSKDSTLKVWSM--KTKKLERDLPGHADEVYAIDWSPDGLRVA----SGGK 411

Query: 326 EQLYVMQSN 334
           +++  +  N
Sbjct: 412 DKVLRLWQN 420



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 7/169 (4%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V+     N+     S   I  + R+    +++  +  D  D         +  ++  R+
Sbjct: 246 YVLRTGPFNLESTRNSDPLIYAKNRYESIGEEILVSGSD--DFTLFLWKPEKEKKSVARM 303

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
              + +I   +FS NG+    S   D+++ ++           L   +    S ++S DS
Sbjct: 304 TGHQQLINDVKFSPNGRVIA-SASFDKSIKLWE-STTGKFIASLRGHVQAVYSIAWSADS 361

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             +V  S       L V        +R         +   WSP G  +A
Sbjct: 362 RLLVSGSK---DSTLKVWSMKTKKLERDLPGHADEVYAIDWSPDGLRVA 407



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 54/156 (34%), Gaps = 7/156 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R+ S G+  L+S   D  + ++  + +  +  R+T    +     +SP+   I   S   
Sbjct: 270 RYESIGEEILVSGSDDFTLFLWKPEKEKKSVARMTGHQQLINDVKFSPNGRVIASASF-- 327

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + + +S         +    + +   WS    L+  +        +  MK    + 
Sbjct: 328 -DKSIKLWESTTGKFIASLRGHVQAVYSIAWSADSRLLV-SGSKDSTLKVWSMKTKKLER 385

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            L      + A  WSP G  +        D   +L+
Sbjct: 386 DLPGHADEVYAIDWSPDGLRVA---SGGKDKVLRLW 418


>gi|298250090|ref|ZP_06973894.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297548094|gb|EFH81961.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 715

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 79/222 (35%), Gaps = 28/222 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILR---VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            +SP+ + +A A   +   +    V + D   +  P     +   ++   +  + K   I
Sbjct: 502 AWSPDSKFLAIAGKFNNGSIDQTMVAIWDGYTNHDPTYQFTYMDAVMDLAWKPDSKELAI 561

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFIN--------ISASYSPDSSQIVFESDREGKE 326
           S    +    +++     +     +T  I+         + S+S  S   +  +     E
Sbjct: 562 SFTNPDGAFSWAIIWSLGSKAEPEDTNKIDLASVSSELSTMSWSSASKNRIASAS---NE 618

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + +  +N   +   S +     +    +WSP G  +A    + +   +     +G    
Sbjct: 619 TVEIWDANSRGK---SYNHNYVQYKQPAIWSPDGLYLASAATADKTIRVW----NGQDHN 671

Query: 385 LLV----EDSNLQAPTWSPSGRSLI-FSRKKDGDTGSKLYSI 421
           ++         +    WSP G+ L+  ++ KD +   +++ +
Sbjct: 672 IVSTCAEHGDTIARIDWSPDGKYLVSTAQDKDQNYTVRIWQV 713



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 80/254 (31%), Gaps = 43/254 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----RFSSNGKRA 272
            +S + + +A      ED   V++ D               ++ AP      +S +GK  
Sbjct: 410 TWSKDNKYIASV----EDNTVVHVWDAFTGEDI----WHTDLLEAPVIVQIAWSPDGKSL 461

Query: 273 LI-------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----FESD 321
            +           D    +   D  ++ +      +   + A +SPDS  +     F + 
Sbjct: 462 AVLETESPLVGSSDPISIVEIYDTTTHKSRS-NCHIAGQVMA-WSPDSKFLAIAGKFNNG 519

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVM---- 376
              +  + +     +           +  D  W P    +A +       F+  ++    
Sbjct: 520 SIDQTMVAIWDGYTNHDPTYQFTYMDAVMDLAWKPDSKELAISFTNPDGAFSWAIIWSLG 579

Query: 377 ----KKDGSQERLLVEDSNLQAPTWSPSGR-SLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
                +D ++  L    S L   +WS + +  +  +  +      +++  D N R ++  
Sbjct: 580 SKAEPEDTNKIDLASVSSELSTMSWSSASKNRIASASNE----TVEIW--DANSRGKSYN 633

Query: 432 NTPAYASDPQ-WVG 444
           +       P  W  
Sbjct: 634 HNYVQYKQPAIWSP 647



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 42/131 (32%), Gaps = 12/131 (9%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAF 363
            SA++S D+  I    D      ++V  +   +    +   EA       WSP G  +A 
Sbjct: 407 ASATWSKDNKYIASVED---NTVVHVWDAFTGEDIWHTDLLEAPVIVQIAWSPDGKSLAV 463

Query: 364 -------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
                     S     + +      + R     +  Q   WSP  + L  + K +  +  
Sbjct: 464 LETESPLVGSSDPISIVEIYDTTTHKSRSNCHIAG-QVMAWSPDSKFLAIAGKFNNGSID 522

Query: 417 KLYSIDLNGRN 427
           +      +G  
Sbjct: 523 QTMVAIWDGYT 533


>gi|283778426|ref|YP_003369181.1| WD-40 repeat-containing protein [Pirellula staleyi DSM 6068]
 gi|283436879|gb|ADB15321.1| WD-40 repeat protein [Pirellula staleyi DSM 6068]
          Length = 335

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 49/277 (17%), Positives = 89/277 (32%), Gaps = 69/277 (24%)

Query: 175 SRILFVSESVVSGIIKNSL-CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +    E++VSG    SL       G  +R +  +  + + + + SP+ + +A      
Sbjct: 66  TGVALAGETLVSGSYDCSLIWRNITTGEIVRKIENAHGKWIRQVKASPDGKWIASV---- 121

Query: 234 EDILRVYLMDTRI--------DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            D + V L D               +   +F SM+ A  FS++  R   S  +   ++++
Sbjct: 122 GDDMVVRLWDAATGEKKHELRGHDERTPNHFPSMLYACAFSADSTRLA-SADRIGRVNVW 180

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             D+   A  +L                              LY        ++RI    
Sbjct: 181 --DVSGGA--KLATVDA-----------------------PGLYTWDP----KQRIHSIG 209

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---------------S 390
            A      +SP G  I      G    IG +       R+   D                
Sbjct: 210 GA--RSVAFSPDGKTIVV----GGIGHIGNIDHLDGPARVEAFDWEKGEKLHEFVGEAKG 263

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            ++   ++P  + LI      GD G  +Y +DL  + 
Sbjct: 264 LIETLHFAPDNQWLI---GAGGDNGGLIYCLDLASKK 297



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 23/211 (10%), Positives = 59/211 (27%), Gaps = 39/211 (18%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           PN  ++ +    D  +  V  +        K +    S +     +  G+  +       
Sbjct: 27  PNSSRL-FVGNSDGKVYDVDPLVEGGKVEFKPLEGHTSYVTGVALA--GETLV---SGSY 80

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASY------SPDSSQIVFESDREGKEQLYVMQSN 334
              +   ++ +    R       N    +      SPD   I    D      + +  + 
Sbjct: 81  DCSLIWRNITTGEIVR----KIENAHGKWIRQVKASPDGKWIASVGD---DMVVRLWDAA 133

Query: 335 GSDQK--------RISQDKEASYFDPVWSPQGDLIAFTKFSG--------EKFAIGVMKK 378
             ++K        R      +  +   +S     +A     G            +  +  
Sbjct: 134 TGEKKHELRGHDERTPNHFPSMLYACAFSADSTRLASADRIGRVNVWDVSGGAKLATVDA 193

Query: 379 DG----SQERLLVEDSNLQAPTWSPSGRSLI 405
            G      ++ +      ++  +SP G++++
Sbjct: 194 PGLYTWDPKQRIHSIGGARSVAFSPDGKTIV 224


>gi|163748420|ref|ZP_02155674.1| dipeptidyl peptidase IV [Shewanella benthica KT99]
 gi|161331998|gb|EDQ02675.1| dipeptidyl peptidase IV [Shewanella benthica KT99]
          Length = 750

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 66/194 (34%), Gaps = 55/194 (28%)

Query: 261 LAPR---FSSNGKRALI-SVQKDE--AMDIYSVDLQSNA------TERLTNTLFIN---- 304
            +PR    S +GKR    + +KD+    D++ +D+ S         ++LT     +    
Sbjct: 53  TSPRGLKLSPDGKRVTYLAGRKDDQYFYDLWQMDVASGKKSILVDADKLTIGELSDEEKA 112

Query: 305 ------------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                       +   +S DS  I+  +       LY    +  +   +    +    D 
Sbjct: 113 RRERQRIYGQGIMEYFWSDDSQAILIPA----SGVLYYFSVDDGEVNLL-PTGDGFVTDA 167

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQA 394
             SP+G+ ++F +       + V++   S+   +  D                    +  
Sbjct: 168 RLSPKGNYVSFVRDQ----NLFVLELKTSKLTAMTTDGGGAIKNAMAEFVAQEEMGRMTG 223

Query: 395 PTWSPSGRSLIFSR 408
             WSP   ++ ++R
Sbjct: 224 YWWSPDESAIAYTR 237



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 55/195 (28%), Gaps = 51/195 (26%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI-------------------------DRAPKRIG 254
           SP+ ++V Y     +D     L    +                          R  +RI 
Sbjct: 61  SPDGKRVTYLAGRKDDQYFYDLWQMDVASGKKSILVDADKLTIGELSDEEKARRERQRIY 120

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               M     +S + +  LI         +Y   +       L         A  SP  +
Sbjct: 121 GQGIMEYF--WSDDSQAILIPASG----VLYYFSVDDGEVNLLPTGDGFVTDARLSPKGN 174

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQG 358
            + F  D    + L+V++   S    ++ D   +  + +                WSP  
Sbjct: 175 YVSFVRD----QNLFVLELKTSKLTAMTTDGGGAIKNAMAEFVAQEEMGRMTGYWWSPDE 230

Query: 359 DLIAFTKFSGEKFAI 373
             IA+T+       +
Sbjct: 231 SAIAYTRIDESGVEL 245



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 75/222 (33%), Gaps = 41/222 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDR---APKRIGNFRSMILA------------ 262
            +SP++  +AY   D+  +  V   +   D      +R        +             
Sbjct: 225 WWSPDESAIAYTRIDESGVELVTRNEIYADGIKLTEQRYPYAGKNNVTIKLAVVTLAEQK 284

Query: 263 --------------PR--FSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFIN 304
                         PR  +  + KR     Q  +  ++D+  V L      R+      +
Sbjct: 285 EIWVDLGKEQDIYLPRVNWLPDSKRLSYQWQSRDQQSLDLRVVSLAQIDKSRVLVEERSD 344

Query: 305 ISASYSPD------SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              + + D          ++ S+R+G + LY++  +G  +++++          +   + 
Sbjct: 345 AWVNLNNDLHFLKQQESFIWASERDGFKHLYLIGLDGKVKQQLTSGGWTVDEVELVDEKT 404

Query: 359 DLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             I FT       +  +  +  +G +   + + S + +P ++
Sbjct: 405 GWIYFTGRKTLVTEKHLYRVPLNGGKVENISQRSGMHSPVFA 446


>gi|237712309|ref|ZP_04542790.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229453630|gb|EEO59351.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 816

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 77/199 (38%), Gaps = 28/199 (14%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFI 303
           + +      + A   S++G+  L+   +            +Y +D+Q+   E L +    
Sbjct: 325 QPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPTTLFSLYRLDMQTLQAELLIDKDGF 384

Query: 304 NISASYSPDSSQIVFESDRE-----GKE------------QLYVMQSNGSDQKRISQDKE 346
              A +SPD +Q++     E     GK             QLY++         +++D  
Sbjct: 385 ISGARFSPDGTQVLVSGSPESLGGIGKNVKEGQTPSMTDGQLYLLNIADKRVTPLTKDFN 444

Query: 347 ASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSL 404
            S    VW+   G  I FT  + + +++  M   DG   +L V +  + + + + +   +
Sbjct: 445 PSVQRAVWNKADGQ-IYFTAENRDCYSLYRMNPADGKILQLEVSEDLVNSFSLAQNAPVM 503

Query: 405 IFSRKKDGDTGSKLYSIDL 423
            +   +      +LY+++ 
Sbjct: 504 AY-YGQSASNSDRLYTMNT 521



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 59/263 (22%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-----FSSNGKRALI 274
           SP+ + +           R   +  R   + +        +LA R     +     R   
Sbjct: 187 SPDGRYLI-------TNYRTTCVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYY 239

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---------- 324
           +    +   +  VD  +     L N    +    ++P    ++F   +EG          
Sbjct: 240 TRTGVDGRQLIVVDPLTGVEAVLVN-KLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEV 298

Query: 325 ------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-------TK 365
                       +  L          + ++     + +    S  G  +         TK
Sbjct: 299 LEPDDRQPGWRNRSYLAKYDLKTGLLQPLTF-GYHNVWAADISNDGRYLLMMTSQSRLTK 357

Query: 366 FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK-----------KDGD 413
                F++  +     Q  LL++ D  +    +SP G  ++ S             K+G 
Sbjct: 358 RPTTLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVSGSPESLGGIGKNVKEGQ 417

Query: 414 TGS----KLYSIDLNGRNETLIN 432
           T S    +LY +++  +  T + 
Sbjct: 418 TPSMTDGQLYLLNIADKRVTPLT 440


>gi|91789811|ref|YP_550763.1| hypothetical protein Bpro_3971 [Polaromonas sp. JS666]
 gi|91699036|gb|ABE45865.1| conserved hypothetical protein [Polaromonas sp. JS666]
          Length = 377

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 53/285 (18%), Positives = 100/285 (35%), Gaps = 32/285 (11%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
              ++PA  R+IA +  D     +  +KG     I  ++     G +   L V       
Sbjct: 2   TTAAAPAGKRQIALSAVDG---KLVLDKGA----IKVINHGERDGAMLYDLSVFPPREVG 54

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDED--------ILRVYLMDTRIDRAPKRIG 254
              +  S          SP+ Q +A  T   +         I    +    I   P RI 
Sbjct: 55  YLAMPTSLAGPPQSAAVSPD-QTLALVTAAQKTDPANPARTIPDTRVTVIDIASGPARIT 113

Query: 255 NFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQS---NATERLTNTLFINISAS 308
                 L P    FS +G+ A+++ + D  + ++ V+ Q+    AT  + +      S +
Sbjct: 114 QTLEAGLGPTGVSFSPDGRMAVVANRNDGTLSVFRVEGQALVKTATVPVGDRQCQPASTA 173

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIA---F 363
           ++PD + ++    R+G   + V        +   +D  A    +    +P G        
Sbjct: 174 FTPDGATLLVS--RDGDHFVSVFDVADGQVRAAGRDISAGIKPYGLSVAPNGQFAVTANV 231

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLI 405
            + SG+  +I V+       R++        P     SP G  ++
Sbjct: 232 GRVSGDADSISVIDLTRKPYRVMDTLGVAATPEAVLISPDGAWVV 276


>gi|302557315|ref|ZP_07309657.1| S9C (acylaminoacyl-peptidase) family peptidase [Streptomyces
           griseoflavus Tu4000]
 gi|302474933|gb|EFL38026.1| S9C (acylaminoacyl-peptidase) family peptidase [Streptomyces
           griseoflavus Tu4000]
          Length = 654

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 97/294 (32%), Gaps = 62/294 (21%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG------ANIRYLTPSRDQILFEPRF 219
           +  E+G+    +   +    S + +  L  +  DG      A +R L+  R + +  PR 
Sbjct: 135 LLPERGEVWCVLEEFTGEGPSDVRR-VLAAVPLDGSAADDRAAVRELSDGRHRFVTGPRL 193

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQK 278
           SP+  + A+  +D   +                               +G   L++ V  
Sbjct: 194 SPDGLRAAWIGWDHPRMPW-----------------------------DGTELLVADVSA 224

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD- 337
           D  +      +     E +         A ++ D  ++++ SDR G   LY    +G   
Sbjct: 225 DGTLRDART-VAGGPEESVPQ-------ADWTHDG-RLLYASDRSGWWNLYR---DGEPL 272

Query: 338 -QKRISQDKEASYFDPVW-SP-QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
             +              W +P  G L+A     G   A+GV+  +  +            
Sbjct: 273 CPREEEFGGPLWKLGHRWFAPLDGGLVAVLHGRGAP-ALGVLDPETGEVVDAAGPWTEFT 331

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN-------TPAYASDPQ 441
           PT +  G  ++ +      +G ++  +D       +I         PAY  +PQ
Sbjct: 332 PTLAALGERVV-AVGAGTRSGHEVVELDTRTGRARVIGARHEDAVDPAYYPEPQ 384


>gi|296159160|ref|ZP_06841987.1| 6-phosphogluconolactonase [Burkholderia sp. Ch1-1]
 gi|295890721|gb|EFG70512.1| 6-phosphogluconolactonase [Burkholderia sp. Ch1-1]
          Length = 430

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 56/349 (16%), Positives = 109/349 (31%), Gaps = 52/349 (14%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-------QIIGKKFFSSPASWRKIAHTIS 159
           G   ++ G       + L V +R +D K  +       Q +   +       R +     
Sbjct: 66  GVYDMLVGTYTGGKSEGLYV-YR-FDTKTGEATRVSVAQTVNPSYLVVSRDRRFV----- 118

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQ-ILFEP 217
                 + G+ G  + R    +    +   + S L  +  DG +  YL+ S D   L   
Sbjct: 119 -YAVNELPGDNGPASQRGGISAFRFDAASGQLSFLNKVSADGNDPCYLSLSPDGKYLLSA 177

Query: 218 RFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +S    P      +    D  +    L        P +     S + +  FS +G+   
Sbjct: 178 NYSVAADPGGSFAVFPLQADGQVGASVLTVHHEGGGPVKGRQDNSHVHSTVFSPDGRYLF 237

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              Q   A  +YS                      Y+PD S  +F       +  Y  + 
Sbjct: 238 --AQDLGADKLYSY--------------------RYTPDGSSGLF----GPTDWRYTQEK 271

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            G+  + +    +  +        G +  F    G+   +  +       +  V  S + 
Sbjct: 272 AGTGPRHLVFGADGKHAYLTSELAGTVSTFNYNDGKLTQVQTLSLTEPGFKGAVGGSAIH 331

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQ 441
               SP GR L ++  +       ++S+D  NG  + + +  +    P+
Sbjct: 332 L---SPDGRFL-YASNRGDANDIVIFSVDPANGHLKKIGHQSSLGKSPR 376


>gi|238578595|ref|XP_002388772.1| hypothetical protein MPER_12171 [Moniliophthora perniciosa FA553]
 gi|215450356|gb|EEB89702.1| hypothetical protein MPER_12171 [Moniliophthora perniciosa FA553]
          Length = 402

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 41/248 (16%), Positives = 83/248 (33%), Gaps = 22/248 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             V++G       + +    N   +  + D  +    F+ +    AY    D+  +  Y 
Sbjct: 127 RRVLTGSTSGEFTLWNGLTFNFETILQAHDTAICTFAFTHSG---AYLASADKSGIIKYF 183

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                +    +  + R  I    FS + +R   +   D ++ I++ + +S     LT   
Sbjct: 184 EPNMNNLTAWQGSSSREAIRGISFSPDDRRFA-TASDDSSVRIWAFE-ESRVESVLTGH- 240

Query: 302 FINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             ++    + P    +V  S       +                 + +     WSP G+L
Sbjct: 241 GWDVKCVQWHPTKGLLVSGSK---DNMVKFWDPRTGTVLTTLHQHKNTIQALAWSPNGNL 297

Query: 361 IAFTKFSG--EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           +A          F I  MK    + R+L      + + TW PS   L+      G  G+ 
Sbjct: 298 VASASRDQTVRVFDIRAMK----EFRVLKGHKKEVDSVTWHPSHPILV----SGGSEGAI 349

Query: 418 L-YSIDLN 424
           + + +  +
Sbjct: 350 IHWDLSTD 357


>gi|301162136|emb|CBW21681.1| conserved hypothetical exported protein [Bacteroides fragilis 638R]
          Length = 952

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 78/236 (33%), Gaps = 11/236 (4%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I   ++   G      L       +    + +   D D  NI+ LTP   Q    P    
Sbjct: 344 INSRLSYRNGRVYWSELVPGLR-WTHQNYSIIKYYDLDKKNIKTLTPR--QRYLSPAIDE 400

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
             Q +A +    E   ++ L+               +  +     + G   +     D  
Sbjct: 401 QGQHIAVSRPTVEGKNQLVLIQAEKGNELAAFDVPDNAFIKELTFAGGDTIISIAVADSG 460

Query: 282 MDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + +   +  +   + L  T   N  S  +  D  +I FES   G   +Y +       +R
Sbjct: 461 IRLLQFNFGNGIWKELLKTASANITSPVW-KDG-KIFFESGANGINNIYSLNPADGQVRR 518

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           ++  +  ++     S  G L  F+ +  + + I  +  D     +L E ++L  P 
Sbjct: 519 MTAARFGAFDPSFGSSDGRLF-FSDYQADGYRIASLPTDS----MLFEKADLNRPA 569



 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 11/123 (8%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERL 385
           +L          K + +   A+   PVW   G  I F   +     I  +   DG   R+
Sbjct: 462 RLLQFNFGNGIWKELLKTASANITSPVW-KDGK-IFFESGANGINNIYSLNPADGQVRRM 519

Query: 386 LVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                    P++ S  GR  +F      D G ++ S+  +    +++   A  + P  + 
Sbjct: 520 TAARFGAFDPSFGSSDGR--LFFSDYQAD-GYRIASLPTD----SMLFEKADLNRPASMP 572

Query: 445 FMD 447
           F++
Sbjct: 573 FVE 575


>gi|195997775|ref|XP_002108756.1| hypothetical protein TRIADDRAFT_4112 [Trichoplax adhaerens]
 gi|190589532|gb|EDV29554.1| hypothetical protein TRIADDRAFT_4112 [Trichoplax adhaerens]
          Length = 285

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 55/172 (31%), Gaps = 16/172 (9%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-- 296
           V L + ++ R   R     + + A  FS +GK    +  KD  + +Y +   S       
Sbjct: 71  VMLWNIKLGRRVARFEAHENTVTACTFSPDGKCLA-TASKDCTIKLYDIVPGSGQYINGK 129

Query: 297 ---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              L        SA +SPD   +   SD      + +          I  D         
Sbjct: 130 YLCLEGHEGPIHSAQFSPDGILLATCSD---DRTIRLWNRVSGKITSILTDPYNPVIQCR 186

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGR 402
           +S  G  IA          + V      +   ++E  + +  T   +S  G+
Sbjct: 187 FSGDGGEIASCS----GKCVRVWNTMLCEIVNILEGYHTEMVTTIAFSADGK 234



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 69/197 (35%), Gaps = 24/197 (12%)

Query: 218 RFSPNQQKVAYATYD--DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            FSP+ + +A A+ D   +    V      I+     +      I + +FS +G   L++
Sbjct: 96  TFSPDGKCLATASKDCTIKLYDIVPGSGQYINGKYLCLEGHEGPIHSAQFSPDG--ILLA 153

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD---REGKEQLY-VM 331
              D+        +    T  LT+     I   +S D  +I   S    R     L  ++
Sbjct: 154 TCSDDRTIRLWNRVSGKITSILTDPYNPVIQCRFSGDGGEIASCSGKCVRVWNTMLCEIV 213

Query: 332 Q-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL---V 387
               G   + ++           +S  G  IA          I + + + +  +     V
Sbjct: 214 NILEGYHTEMVTT--------IAFSADGK-IATGSTDRT---ICIWEAEKTALKSTPLHV 261

Query: 388 EDSNLQAPTWSPSGRSL 404
             S ++A  +S SG+ L
Sbjct: 262 SKSAVRACCFSRSGKYL 278



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 42/113 (37%), Gaps = 6/113 (5%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD + IV  S       + + +       R+ +  + +     +S     I  +    
Sbjct: 12  FSPDDTFIVTTS---ADSTIALWELKSGRLYRVFKQHKKAVTCCSFSSIDTHILASGSED 68

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +  +K      R    ++ + A T+SP G+ L  + K   D   KLY I
Sbjct: 69  HLVMLWNIKLGRRVARFEAHENTVTACTFSPDGKCLATASK---DCTIKLYDI 118


>gi|54303639|ref|YP_133632.1| hypothetical protein PBPRB1987 [Photobacterium profundum SS9]
 gi|46917070|emb|CAG23832.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 970

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 107/293 (36%), Gaps = 45/293 (15%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +    G   SRI+    +   G   N L +    G  IR     R + +   R+  N ++
Sbjct: 375 LHPTGGLVVSRIV----NYTDGRQINDLFLYQDKGW-IRLTERLRFRKV---RWMLNGRQ 426

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMD- 283
           +  A+ + + +  ++L+D             +  +L     S  G   + S+++      
Sbjct: 427 LL-ASRNIDGLSELWLIDAGNSHTSLVWRGEQGDVLGGFDISPTGDFVVASMKRPHQGWN 485

Query: 284 ---IYSVDLQSNATE-----RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              +    L SN         LT+T     S  Y PD  +I + +D EG   ++V+  N 
Sbjct: 486 LERLPITSLPSNTLLDIDWLPLTDTKATENSPVYLPDG-RIAYSADYEGIYNIFVIAPNS 544

Query: 336 SDQKRISQDKEASYFDPVWSPQ-GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            +  + +++   + F P W P  G  +A+  +  + + + V++    Q + L   +    
Sbjct: 545 GEVTQWTREIGGA-FQPQWQPYLG--LAYQAYGTDGYHLKVIE----QPKPLTTFT---- 593

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-WVGFM 446
                          + G        ++ + ++     TP  +  P+ W+  +
Sbjct: 594 ------------VNSQQGRYDYPPVVVNTSDKSAVEPYTPWSSLRPRTWLPLL 634



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 64/201 (31%), Gaps = 22/201 (10%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
               L V  R+ +  D +QI    F      W ++   +           +   N R L 
Sbjct: 377 PTGGLVVS-RIVNYTDGRQI-NDLFLYQDKGWIRLTERL------RFRKVRWMLNGRQLL 428

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATYDDEDIL 237
            S ++      + L ++D  G +   L    +Q      F  SP    V  +        
Sbjct: 429 ASRNIDG---LSELWLIDA-GNSHTSLVWRGEQGDVLGGFDISPTGDFVVASMKRPHQGW 484

Query: 238 RVYLM-------DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            +  +       +T +D     + + ++   +P +  +G R   S   +   +I+ +   
Sbjct: 485 NLERLPITSLPSNTLLDIDWLPLTDTKATENSPVYLPDG-RIAYSADYEGIYNIFVIAPN 543

Query: 291 SNATERLTNTLFINISASYSP 311
           S    + T  +       + P
Sbjct: 544 SGEVTQWTREIGGAFQPQWQP 564


>gi|85101636|ref|XP_961183.1| periodic tryptophan protein 2 [Neurospora crassa OR74A]
 gi|30580488|sp|Q9C270|PWP2_NEUCR RecName: Full=Periodic tryptophan protein 2 homolog
 gi|12718473|emb|CAC28802.1| probable periodic tryptophan protein PWP2 [Neurospora crassa]
 gi|28922724|gb|EAA31947.1| periodic tryptophan protein 2 [Neurospora crassa OR74A]
          Length = 899

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 96/237 (40%), Gaps = 25/237 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I  L+ S+++I F    + + + +A+       +L V+   +      K+ G+F SM   
Sbjct: 289 IHTLSISQNEIDFV-TINKSGEWLAFGASKLGQLL-VWEWQSE-SYILKQQGHFDSMNSL 345

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESD 321
             +S +G+R + +V  D  + ++  D +S       T       +  +S   + ++F S 
Sbjct: 346 -VYSPDGQRIV-TVADDGKIKVW--DTESGFCIVTFTEHTSGITACEFSKKGN-VLFTSS 400

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +G  + + +     + +  +  +  S+      P G+++A        F I +      
Sbjct: 401 LDGSIRAWDL-IRYRNFRTFTAPERLSFSCMAVDPSGEIVAAGSVD--SFDIHIWSVQTG 457

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +LL   S  + P     ++P+G  L+       D  ++++SI     N T  + P
Sbjct: 458 --QLLDRLSGHEGPVSSLAFAPNGGLLV---SGSWDRTARIWSI----FNRTQTSEP 505


>gi|328772359|gb|EGF82397.1| hypothetical protein BATDEDRAFT_86201 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 363

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 44/324 (13%), Positives = 98/324 (30%), Gaps = 27/324 (8%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISD---DIYQSITGEKGDFNSRILFVSESVVSGIIK 190
              K+++     +S +  R +   +SD    I      E    + +      ++ +    
Sbjct: 31  ASGKELMAATSVTSGSLTRSVK-RVSDLNAPIMHLTGHEGEVVSCKFSPNGRNLATASFD 89

Query: 191 NSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             + + +  GA    +        + + ++S +   +  ++ D      V + D      
Sbjct: 90  RLILLWNAFGAAENHHKLAGHTGAVLQVQWSRDGLHIYSSSADK----TVAVWDAVNGER 145

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            ++     S + A   S  G   + S   D  + ++  D +     +  N  +   S ++
Sbjct: 146 VRKFKGHTSFVNACSASRRGPELVASTGDDGLIFLW--DPRQKQHAKKFNDPYPLTSIAF 203

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S D   I F    E    +        +   +    + +      +  GD +  +     
Sbjct: 204 SLDGGSI-FAGGIE--NDIKAWDLRTDNVAYVMAGHDDTITGLCLNADGDKLL-SNGLDN 259

Query: 370 KFAIGVMKKDGSQERLLVEDS---------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              I  +K        L +           NL  P WSP  + +       GD    ++ 
Sbjct: 260 TVRIWDVKPFTLTPSRLSKTFEGAPHGFEKNLIRPCWSPDSQFIAAGS---GDRSVVVWD 316

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
           +  +     L       +D  W G
Sbjct: 317 VGSSDIVYKLPGHKGCVNDVDWTG 340


>gi|327404871|ref|YP_004345709.1| hypothetical protein Fluta_2892 [Fluviicola taffensis DSM 16823]
 gi|327320379|gb|AEA44871.1| hypothetical protein Fluta_2892 [Fluviicola taffensis DSM 16823]
          Length = 365

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 51/296 (17%), Positives = 100/296 (33%), Gaps = 59/296 (19%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLT---PSRDQILFEPRFSPNQQKVA-------YA 229
           V+ S         + + + DG     LT    + ++  +   + P  Q +        Y 
Sbjct: 56  VAYSKPDPDGTYKIYISNFDGTGETQLTYPGWASNRHQWAEEWDPTGQYLYCYVEKTDYV 115

Query: 230 T-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----------RFSSNGKRALI 274
           T        ED +  Y   T +    +       M   P            SS+G     
Sbjct: 116 TESGHTRTPEDAIPGYGAYTDLWIIKRDGSQAWQMTNFPNDYNHGIIHGAISSDGT-MFS 174

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             ++ +A     ++L + A       +F  +  +++P   Q VF + R  +      +  
Sbjct: 175 WTERIQAPVFLDLNLAAGA------YVFKVVDVTWNP---QPVFSNVRTYQPN---NELA 222

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGVMKKDGSQERLLVEDSN 391
           G + + IS  K             D++ ++ F         I  +         L  +S 
Sbjct: 223 GGEVESISPSKT------------DILVYSTFESHNLVATPIYRIDLTTGNTTKLTTESF 270

Query: 392 LQAPTWSPSGRSLIFSRKKDGD------TGSKLYSIDLNGRNETLINTPAYASDPQ 441
            QAPT++P+G+ +++   +  D       G+  + +D NG N+  +        PQ
Sbjct: 271 SQAPTYTPNGQRIVYMSGEGCDIFPGQLQGADWWIMDANGSNKKRLTYMNLKDHPQ 326


>gi|284054241|ref|ZP_06384451.1| WD-40 repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 519

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 59/156 (37%), Gaps = 10/156 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            +           +     S + + +A   +D      V L D       + +     ++
Sbjct: 372 FSPVQTMTGHHSPILAIAISSDGKTLASGGWDG----SVKLWDLPTGSLKQTLEGHSQLV 427

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
            A   S +GK    +  +D  + ++  +L++ A +R L       +S + SP+   +   
Sbjct: 428 GAIAISPDGKTLA-TGSRDRTIRLW--NLETGALKRTLEGHELSVLSLAISPNGEILASG 484

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           S  +G   ++ +  NG   +R+S  ++  +   + S
Sbjct: 485 S-ADGTITIWKLD-NGQPIRRLSGHRDGVWSVAIAS 518



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 66/214 (30%), Gaps = 25/214 (11%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN------ 292
           V + +       +              + NG++  I+  +D  + I+  DL +       
Sbjct: 316 VDIWNLATGGLRQSFRAHNREATRVLVTPNGQQL-ITAGEDGNIRIW--DLAAGLQAGSF 372

Query: 293 -ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              + +T      ++ + S D   +      +G  +L+         K+  +        
Sbjct: 373 SPVQTMTGHHSPILAIAISSDGKTLA-SGGWDGSVKLW--DLPTGSLKQTLEGHSQLVGA 429

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRK 409
              SP G  +A          I +   +    +  +E   L   +   SP+G  L     
Sbjct: 430 IAISPDGKTLATGSRDRT---IRLWNLETGALKRTLEGHELSVLSLAISPNGEILA---S 483

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              D    ++ +D NG+    ++      D  W 
Sbjct: 484 GSADGTITIWKLD-NGQPIRRLS---GHRDGVWS 513



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 45/120 (37%), Gaps = 6/120 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ SG    S+ + D    +++       Q++     SP+ + +A  + D      + L
Sbjct: 395 KTLASGGWDGSVKLWDLPTGSLKQTLEGHSQLVGAIAISPDGKTLATGSRDR----TIRL 450

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +       + +      +L+   S NG   L S   D  + I+ +D       RL+   
Sbjct: 451 WNLETGALKRTLEGHELSVLSLAISPNG-EILASGSADGTITIWKLD-NGQPIRRLSGHR 508


>gi|229084200|ref|ZP_04216486.1| hypothetical protein bcere0022_8450 [Bacillus cereus Rock3-44]
 gi|228699128|gb|EEL51827.1| hypothetical protein bcere0022_8450 [Bacillus cereus Rock3-44]
          Length = 345

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 89/269 (33%), Gaps = 17/269 (6%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           +  R+ +  I D    ++  +   F +    V  +  S  + +   +      N + LT 
Sbjct: 62  SDSREQSLRIYDLAKGTLRKKIDGFVTPRNIVFVNNGSEFVVSDSTLGTLRFYNAKSLTL 121

Query: 209 SRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             + ++    F    SP+ + +     +++    V ++D    +    I  F        
Sbjct: 122 KDEVVVGPGAFGTAVSPDGKTL---YVNNQAHSSVTVIDLEKRKPTAVITGFSQPRQGIT 178

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S NGK   ++  K +   +  VD  +    R      +    S + D   +   +   G
Sbjct: 179 VSPNGKYVFVTNFKGD--KVSVVDAATKNIVREIIGFSMIRGISVTADGQTLYAAN--SG 234

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           ++ + V+ ++        +     Y     SP G L+  +  +     I V+    +   
Sbjct: 235 RDSISVVDTSLGQIVNEVKVGREPYGA-ALSPDGKLLFASSKADNT--IDVINVSDNHVI 291

Query: 385 LLVEDSNL--QAPTWSPSGRSLIFSRKKD 411
             +       QA  +S  G    +   +D
Sbjct: 292 KTISGFTEPRQAIVFSQDGER-AYVLNRD 319


>gi|254425427|ref|ZP_05039145.1| peptidase, S9A/B/C family, catalytic domain protein [Synechococcus
           sp. PCC 7335]
 gi|196192916|gb|EDX87880.1| peptidase, S9A/B/C family, catalytic domain protein [Synechococcus
           sp. PCC 7335]
          Length = 651

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 75/232 (32%), Gaps = 27/232 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQII--GKKFFSSPASWRKIAHTISDD---IYQSITG 168
           G V +     + V  R+ +      +I  G  +FS+ A  R       +D   I  ++T 
Sbjct: 61  GSVTEITPASVNVRTRVHEYGGGAYVIHQGTVYFSNFADQRLYCQRAGEDPFAITPAVTP 120

Query: 169 EKGDFNSRILF----------VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
             G   + ++           V +   SG   N++  +   G   + +    D     PR
Sbjct: 121 AAGLRYADMVVDAARERLICVVEDHRQSGEAINAIATVPLSGGLPKVIVSGND-FYSSPR 179

Query: 219 FSPNQQKVAYATYDDEDILRV--------YLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            SP+   +A+ T++   +              D  +      +GN +  +  P++S  G 
Sbjct: 180 LSPDGTALAWITWNHPQMPWDGTELWLAEITEDGSLSHPRHLVGNTKESVCQPKWSPAGT 239

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
                       ++Y    +    E L           +S   S   F  +R
Sbjct: 240 -LHFISDATGWWNLYR--WEGERGEPLFPMEAEFAGPQWSFGQSSYGFVDNR 288



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 55/148 (37%), Gaps = 19/148 (12%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD------REGKEQ-LYVMQSNG- 335
           I +V L     + + +      S   SPD + + + +        +G E  L  +  +G 
Sbjct: 155 IATVPLSGGLPKVIVSGNDFYSSPRLSPDGTALAWITWNHPQMPWDGTELWLAEITEDGS 214

Query: 336 -SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            S  + +  + + S   P WSP G  + F   +   + +   + +  +  L   ++    
Sbjct: 215 LSHPRHLVGNTKESVCQPKWSPAGT-LHFISDATGWWNLYRWEGERGEP-LFPMEAEFAG 272

Query: 395 PTWS--------PSGRSLIFSRKKDGDT 414
           P WS           R ++ + +  G+T
Sbjct: 273 PQWSFGQSSYGFVDNRHILCTYQYQGET 300


>gi|145530840|ref|XP_001451192.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124418836|emb|CAK83795.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2519

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 51/273 (18%), Positives = 92/273 (33%), Gaps = 44/273 (16%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+++  G D   V  RLWDVK  KQI   +            H+               F
Sbjct: 2119 GQILASGSDDQSV--RLWDVKTFKQIGYLQ-----------GHS--------------HF 2151

Query: 174  NSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
             + ++F  + +V  SG     +   +       Y+       +    FSP+ + +A  + 
Sbjct: 2152 VTSLVFSPDGMVLYSGSQDKMIRQWNVTATKQDYVLDGHLNYVSSLSFSPDGEMLASGSR 2211

Query: 232  DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D      V L + +      R+     M+    FS   K  L S   D  + I+  D Q 
Sbjct: 2212 D----CSVQLWNVQEGTLICRLEGHTEMVWCVLFSPT-KMILASGGDDRTIRIW--DPQF 2264

Query: 292  NATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASY 349
                 + N+   +I S ++S D S +   S   G   +  +         ++      + 
Sbjct: 2265 QKQLHIINSECDSIQSLAFSNDGSMLA--SGSGGFSYIVKIWNLKDYSLTQVFDVHSHTV 2322

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                +   G++I      G    + V+  +  Q
Sbjct: 2323 NCLQFMKNGNII----SGGADNTVFVLNVETKQ 2351



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 53/154 (34%), Gaps = 14/154 (9%)

Query: 271  RALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDREGKEQ 327
            + L S  KD  + ++ +        +L+          S S++ +   +   SD    + 
Sbjct: 2078 QLLSSGYKDGRIVMWDI----KELRQLSTLEGHGSNVNSLSFTRNGQILASGSD---DQS 2130

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            + +       Q    Q         V+SP G ++ ++    +      +        L  
Sbjct: 2131 VRLWDVKTFKQIGYLQGHSHFVTSLVFSPDG-MVLYSGSQDKMIRQWNVTATKQDYVLDG 2189

Query: 388  EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              + + + ++SP G  L    +   D   +L+++
Sbjct: 2190 HLNYVSSLSFSPDGEMLASGSR---DCSVQLWNV 2220


>gi|302555966|ref|ZP_07308308.1| secreted protein [Streptomyces viridochromogenes DSM 40736]
 gi|302473584|gb|EFL36677.1| secreted protein [Streptomyces viridochromogenes DSM 40736]
          Length = 402

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 44/381 (11%), Positives = 94/381 (24%), Gaps = 52/381 (13%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQII 140
                          + P  Q     G + L  G           +    +D +  +   
Sbjct: 35  PPPASPTTSAPPEASASPSRQARRPSGPRPLYLGTYTSVEGGGKGIGLATYDAETGRIAG 94

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
                            + D  Y ++  ++       L+       G +     V   D 
Sbjct: 95  TGTLTG-----------VGDPSYLAVHPDR-----HTLYAVNEREDGAVT---AVRLSD- 134

Query: 201 ANIRYLTPSRDQILFEPRF---SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
              R +  SR      P      P  + +  A Y    +    +  +        +    
Sbjct: 135 ---RTVLGSRSTGGAAPCHLSVHPGGRWLLSANYGSGSVAVHPIDASGALGERTDLVTHS 191

Query: 258 SMILAPR----------FSSNGKRALISVQKDEAMDIYSVDLQSNAT----ERLTNTLFI 303
           S    P            S +G+  L      + +  Y +D ++          T     
Sbjct: 192 SPAPGPGQEGPHAHQIITSPDGRHVLAVDLGTDTVYTYRLDEKAGTLSEVSRARTRPGAG 251

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGS----DQKRISQDKEASYFDPVW--SPQ 357
               ++ P         + +    +             + + +     + +      +P 
Sbjct: 252 PRHLTFHPGGLYAYLADEVDNTVAVCAYDPATGRVTVGEAQPTGTGSGTNYPAQILVTPN 311

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAP---TWSPSGRSLIFSRKKDGD 413
           G                 ++ DG++ RLL         P    +SP G  L+F+  +   
Sbjct: 312 GRWAYLANRGHNSLTRYAVEADGAKLRLLDTVPVGGDFPRQIAFSPEGT-LLFAANQKSS 370

Query: 414 TGSKLYSIDLNGRNETLINTP 434
           T + ++ +D           P
Sbjct: 371 TVT-VFHVDGTSGTLRRAGEP 390


>gi|114644492|ref|XP_001139820.1| PREDICTED: achalasia, adrenocortical insufficiency, alacrimia
           (Allgrove, triple-A) isoform 3 [Pan troglodytes]
          Length = 444

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  DD     V + +      P      +  + +  +       L    
Sbjct: 158 AWHPHTNKFAVALLDD----SVRVYNASSTIVPSLKHRLQRNVASLAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIR 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  I  T  S   F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKILATTPS-AVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGSRLLFT 346


>gi|45360929|ref|NP_988871.1| WD repeat-containing protein 61 [Xenopus (Silurana) tropicalis]
 gi|82237640|sp|Q6PBD6|WDR61_XENTR RecName: Full=WD repeat-containing protein 61
 gi|37590940|gb|AAH59759.1| WD repeat domain 61 [Xenopus (Silurana) tropicalis]
          Length = 305

 Score = 53.5 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 59/199 (29%), Gaps = 12/199 (6%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           ++         +     SP+   +A ++ D      + L D    +  + I        +
Sbjct: 56  LQSTLEGHQLGVVSVDVSPSGNIMASSSLD----AHIRLWDLESGKQIRAIDAGPVDAWS 111

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESD 321
             FS + +    +      ++I+ V+        L T   FI +S +YSPD   +     
Sbjct: 112 VAFSPDSQHLA-TGSHVGKVNIFGVE-TGKKEYSLDTRGKFI-LSIAYSPDGKYLA---S 165

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 + +            +          +SP   L+  T        I  ++    
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV-TASDDGYIKIYEVQHASL 224

Query: 382 QERLLVEDSNLQAPTWSPS 400
              L    S +    +SP 
Sbjct: 225 AATLSGHGSWVLNVAFSPD 243



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/210 (20%), Positives = 74/210 (35%), Gaps = 33/210 (15%)

Query: 111 LVTGRVIKEGK----DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           +V+  V   G       L    RLWD++  KQI  +   + P     +A   S D     
Sbjct: 67  VVSVDVSPSGNIMASSSLDAHIRLWDLESGKQI--RAIDAGPVDAWSVA--FSPDSQHLA 122

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           TG      S +  V+   V    K              Y   +R + +    +SP+ + +
Sbjct: 123 TG------SHVGKVNIFGVETGKK-------------EYSLDTRGKFILSIAYSPDGKYL 163

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A    D      + + D    +    +      I +  FS +  + L++   D  + IY 
Sbjct: 164 ASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKIYE 218

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQI 316
           V   S A   L+      ++ ++SPD +  
Sbjct: 219 VQHASLAAT-LSGHGSWVLNVAFSPDDTHF 247



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 61/166 (36%), Gaps = 11/166 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D +         +     +   FSP+ Q +A  ++  +    V +      +    
Sbjct: 88  IRLWDLESGKQIRAIDAGPVDAWSVAFSPDSQHLATGSHVGK----VNIFGVETGKKEYS 143

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      IL+  +S +GK    S   D  ++I+ +         L        S ++SPD
Sbjct: 144 LDTRGKFILSIAYSPDGKYLA-SGAIDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPD 201

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQ 357
           S  +V  SD +G  ++Y +Q         +     S+  +  +SP 
Sbjct: 202 SQLLVTASD-DGYIKIYEVQHASLAA---TLSGHGSWVLNVAFSPD 243


>gi|237726448|ref|ZP_04556929.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229434974|gb|EEO45051.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 816

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 77/199 (38%), Gaps = 28/199 (14%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFI 303
           + +      + A   S++G+  L+   +            +Y +D+Q+   E L +    
Sbjct: 325 QPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPTTLFSLYRLDMQTLQAELLIDKDGF 384

Query: 304 NISASYSPDSSQIVFESDRE-----GKE------------QLYVMQSNGSDQKRISQDKE 346
              A +SPD +Q++     E     GK             QLY++         +++D  
Sbjct: 385 ISGARFSPDGTQVLVSGSPESLGGIGKNVKEGQTPSMTDGQLYLLNIADKRVTPLTKDFN 444

Query: 347 ASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSL 404
            S    VW+   G  I FT  + + +++  M   DG   +L V +  + + + + +   +
Sbjct: 445 PSVQRAVWNKADGQ-IYFTAENRDCYSLYRMNPADGKILQLEVSEDLVNSFSLAQNAPVM 503

Query: 405 IFSRKKDGDTGSKLYSIDL 423
            +   +      +LY+++ 
Sbjct: 504 AY-YGQSASNSDRLYTMNT 521



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 59/263 (22%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-----FSSNGKRALI 274
           SP+ + +           R   +  R   + +        +LA R     +     R   
Sbjct: 187 SPDGRYLI-------TNYRTTCVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYY 239

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---------- 324
           +    +   +  VD  +     L N    +    ++P    ++F   +EG          
Sbjct: 240 TRTGVDGRQLIVVDPLTGVEAVLVN-KLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEV 298

Query: 325 ------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-------TK 365
                       +  L          + ++     + +    S  G  +         TK
Sbjct: 299 LEPDDRQPGWRNRSYLAKYDLKTGLLQPLTF-GYHNVWAADISNDGRYLLMMTSQSRLTK 357

Query: 366 FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK-----------KDGD 413
                F++  +     Q  LL++ D  +    +SP G  ++ S             K+G 
Sbjct: 358 RPTTLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVSGSPESLGGIGKNVKEGQ 417

Query: 414 TGS----KLYSIDLNGRNETLIN 432
           T S    +LY +++  +  T + 
Sbjct: 418 TPSMTDGQLYLLNIADKRVTPLT 440


>gi|265752018|ref|ZP_06087811.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263236810|gb|EEZ22280.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 816

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 77/199 (38%), Gaps = 28/199 (14%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFI 303
           + +      + A   S++G+  L+   +            +Y +D+Q+   E L +    
Sbjct: 325 QPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPTTLFSLYRLDMQTLQAELLIDKDGF 384

Query: 304 NISASYSPDSSQIVFESDRE-----GKE------------QLYVMQSNGSDQKRISQDKE 346
              A +SPD +Q++     E     GK             QLY++         +++D  
Sbjct: 385 ISGARFSPDGTQVLVSGSPESLGGIGKNVKEGQTPSMTDGQLYLLNIADKRVTPLTKDFN 444

Query: 347 ASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSL 404
            S    VW+   G  I FT  + + +++  M   DG   +L V +  + + + + +   +
Sbjct: 445 PSVQRAVWNKADGQ-IYFTAENRDCYSLYRMNPADGKILQLEVSEDLVNSFSLAQNAPVM 503

Query: 405 IFSRKKDGDTGSKLYSIDL 423
            +   +      +LY+++ 
Sbjct: 504 AY-YGQSASNSDRLYTMNT 521



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 59/263 (22%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-----FSSNGKRALI 274
           SP+ + +           R   +  R   + +        +LA R     +     R   
Sbjct: 187 SPDGRYLI-------TNYRTTCVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYY 239

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---------- 324
           +    +   +  VD  +     L N    +    ++P    ++F   +EG          
Sbjct: 240 TRTGVDGRQLIVVDPLTGVEAVLVN-KLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEV 298

Query: 325 ------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-------TK 365
                       +  L          + ++     + +    S  G  +         TK
Sbjct: 299 LEPDDRQPGWRNRSYLAKYDLKTGLLQPLTF-GYHNVWAADISNDGRYLLMMTSQSRLTK 357

Query: 366 FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK-----------KDGD 413
                F++  +     Q  LL++ D  +    +SP G  ++ S             K+G 
Sbjct: 358 RPTTLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVSGSPESLGGIGKNVKEGQ 417

Query: 414 TGS----KLYSIDLNGRNETLIN 432
           T S    +LY +++  +  T + 
Sbjct: 418 TPSMTDGQLYLLNIADKRVTPLT 440


>gi|170093878|ref|XP_001878160.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164646614|gb|EDR10859.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 565

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 72/221 (32%), Gaps = 15/221 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             +++G       + +    N   +  + D  +    F+ +    AY    D+  +  Y 
Sbjct: 145 RRILTGSTSGEFTLWNGLTFNFETILQAHDTAICTMAFTHSG---AYLASADKSGIIKYF 201

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                +    +  + R  I    FS + +R   +   D ++ I+S   +S     LT   
Sbjct: 202 EPNMNNLTAWQGSSSREAIRGLSFSPDDRRFA-TASDDSSVRIWSF-AESRVESVLTGHG 259

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +      + P    +V  S      Q+                 + +     WSP G+L+
Sbjct: 260 WDVKCVEWHPTKGLLVSGSK---DNQIKFWDPRTGTVLSTLHQHKNTIQALSWSPNGNLV 316

Query: 362 AFTKFSGEK--FAIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
           A          F I  MK    + R+L      + + TW P
Sbjct: 317 ASASRDQTVRIFDIRAMK----EFRILKGHKKEVCSVTWHP 353



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 69/227 (30%), Gaps = 12/227 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++P  +++   +   E      L +         +    + I    F+ +G     S  
Sbjct: 139 TWTPEGRRILTGSTSGEFT----LWNGLTFNFETILQAHDTAICTMAFTHSGAYLA-SAD 193

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           K   +  +  ++ +    + +++       S+SPD  +    SD      + +     S 
Sbjct: 194 KSGIIKYFEPNMNNLTAWQGSSSREAIRGLSFSPDDRRFATASD---DSSVRIWSFAESR 250

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            + +            W P   L+  +     +      +       L    + +QA +W
Sbjct: 251 VESVLTGHGWDVKCVEWHPTKGLLV-SGSKDNQIKFWDPRTGTVLSTLHQHKNTIQALSW 309

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           SP+G  +  + +   D   +++ I        L           W  
Sbjct: 310 SPNGNLVASASR---DQTVRIFDIRAMKEFRILKGHKKEVCSVTWHP 353


>gi|168018581|ref|XP_001761824.1| WD40 repeat protein, COMPASS complex protein [Physcomitrella patens
           subsp. patens]
 gi|162686879|gb|EDQ73265.1| WD40 repeat protein, COMPASS complex protein [Physcomitrella patens
           subsp. patens]
          Length = 309

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 76/214 (35%), Gaps = 15/214 (7%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V + +    +       + +   +FSP+ + V  ++ D      V + +    +  + + 
Sbjct: 5   VKNYEPYKHKLTLTGHIKPVSSVKFSPDGKWVGSSSADR----TVRIWNATDGKCERSLE 60

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDS 313
                I    +SS+    + +   D+ + ++  D+ +    + L          +++P S
Sbjct: 61  GHSKGISDLAWSSD-SHYVCTASDDKTLKLW--DVHTGEYVKTLKGHTNYVFCVNFNPQS 117

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           + I   S     E + +         R             ++  G LI  + + G    I
Sbjct: 118 NVIASGSF---DETVRLWDVKTGKCLRTLPAHSDPVTAVHFNRDGSLIVSSSYDG-LCRI 173

Query: 374 GVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLI 405
                 G   + L++D N  +    +SP+G+ ++
Sbjct: 174 W-DSATGHCLKTLIDDENPPVSFVKFSPNGKFIL 206



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 60/161 (37%), Gaps = 9/161 (5%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      + + +FS +GK    S   D  + I++          L          ++S D
Sbjct: 17  LTGHIKPVSSVKFSPDGKWVG-SSSADRTVRIWNA-TDGKCERSLEGHSKGISDLAWSSD 74

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S  +   SD    + L +   +  +  +  +      F   ++PQ ++IA   F  E   
Sbjct: 75  SHYVCTASD---DKTLKLWDVHTGEYVKTLKGHTNYVFCVNFNPQSNVIASGSFD-ETVR 130

Query: 373 IGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDG 412
           +  +K  G   R L   S+ + A  ++  G  ++ S   DG
Sbjct: 131 LWDVKT-GKCLRTLPAHSDPVTAVHFNRDGSLIV-SSSYDG 169


>gi|89890253|ref|ZP_01201763.1| hypothetical protein BBFL7_02225 [Flavobacteria bacterium BBFL7]
 gi|89517168|gb|EAS19825.1| hypothetical protein BBFL7_02225 [Flavobacteria bacterium BBFL7]
          Length = 490

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 61/161 (37%), Gaps = 25/161 (15%)

Query: 286 SVDLQSNATERLTNTLFIN---ISASYS------PDSSQIVFESDREGKEQLYVMQSNGS 336
           ++D  +    ++     IN    SA +S      P  ++ ++     G   +Y    NG+
Sbjct: 177 TLDFGTTYLWQVRANDGINQTINSALFSFSTSDFPT-NRFLYVRKVNGNNVIYSSDENGT 235

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP- 395
           +          + + P  + Q + IAF +  G +  +  M  DG+Q + +     +    
Sbjct: 236 EVAL--TTTTTNSWRPRVNRQANKIAFLRSVGAQVHVFTMDLDGTQVQQVTSTVAVAGFN 293

Query: 396 ------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                 +W+ +G  + +       +  KLY+I  NG   T 
Sbjct: 294 LDEVDISWATNGSLIYY------PSLDKLYTIQPNGAGLTQ 328



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 81/217 (37%), Gaps = 23/217 (10%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            +  Y    + + +   +  +  +     +    +    PR +    +          + 
Sbjct: 213 NRFLYVRKVNGNNV---IYSSDENGTEVALTTTTTNSWRPRVNRQANKIAFLRSVGAQVH 269

Query: 284 IYSVDLQSNATERLTNTLFI------NISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           ++++DL     +++T+T+ +       +  S++ + S I + S     ++LY +Q NG+ 
Sbjct: 270 VFTMDLDGTQVQQVTSTVAVAGFNLDEVDISWATNGSLIYYPS----LDKLYTIQPNGAG 325

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVED--SNLQA 394
             +  Q    +    V   +  +   T  F+G    I V+    +  + ++        +
Sbjct: 326 LTQFYQTANGNIISDVDVNEPRVAVKTNDFAGYNVEILVLDMQAAVVQTVLSGVPGAAGS 385

Query: 395 PTWSPSGRSLIFSRKKDG-------DTGSKLYSIDLN 424
              S +  ++++SR   G          S+L+  +LN
Sbjct: 386 IDLSANNSTILYSRDVSGFENIAYRQLDSRLFVYNLN 422


>gi|168039898|ref|XP_001772433.1| WD40 repeat protein, COMPASS complex protein [Physcomitrella patens
           subsp. patens]
 gi|162676230|gb|EDQ62715.1| WD40 repeat protein, COMPASS complex protein [Physcomitrella patens
           subsp. patens]
          Length = 309

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 76/208 (36%), Gaps = 15/208 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +       + +   +FSP+ + V  ++ D      V + ++   +  + +      I
Sbjct: 11  YKHKLTLTGHRKSVSSVKFSPDGKWVGSSSADK----TVRIWNSTDGKCERTLEGHSEGI 66

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+ +    +   D+ + I+  D+Q+    + L          +++P S+ IV  
Sbjct: 67  SDFAWSSDSRYIC-TASDDKTLKIW--DVQTGDCVKTLKGHTNYVFCVNFNPQSNVIVSG 123

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI  + + G    I      
Sbjct: 124 SF---DETVRLWDVKTGKCLKTLPAHSDPVTAVHFNRDGSLIVSSSYDG-LCRIW-DNAT 178

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLI 405
           G   + L++D N  +    +SP+G+ ++
Sbjct: 179 GHCLKTLIDDENPPVSFVKFSPNGKFIL 206



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 56/162 (34%), Gaps = 11/162 (6%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +   R  + + +FS +GK    S   D+ + I++          L          ++S D
Sbjct: 17  LTGHRKSVSSVKFSPDGKWVG-SSSADKTVRIWN-STDGKCERTLEGHSEGISDFAWSSD 74

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S  I   SD    + L +      D  +  +      F   ++PQ ++I    F      
Sbjct: 75  SRYICTASD---DKTLKIWDVQTGDCVKTLKGHTNYVFCVNFNPQSNVIVSGSFDET--- 128

Query: 373 IGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           + +      +  + L      + A  ++  G  ++ S   DG
Sbjct: 129 VRLWDVKTGKCLKTLPAHSDPVTAVHFNRDGSLIV-SSSYDG 169


>gi|331698559|ref|YP_004334798.1| Prolyl oligopeptidase [Pseudonocardia dioxanivorans CB1190]
 gi|326953248|gb|AEA26945.1| Prolyl oligopeptidase [Pseudonocardia dioxanivorans CB1190]
          Length = 709

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 74/259 (28%), Gaps = 42/259 (16%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
                D A+ R +  S  Q      +               D L   L       +    
Sbjct: 29  YRWLEDPADPRTVAWSAAQDQLTAAW--------LTALPGRDALATRLRGLLDAGSVSAP 80

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----S 308
                     R S  G+   + + ++   D       +     L + + ++        +
Sbjct: 81  LWRAGRAFLVRRSP-GQEHAVVLVREPGPD------GTTVERVLLDPVALDPDGLTTLDA 133

Query: 309 YSPD--SSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           + PD    ++ ++  R G     L+VM     +           Y D  W P G+ I F 
Sbjct: 134 WVPDLEGRRLAYQVSRGGDENSVLHVMDVASGELVE-KPIDRCRYADVAWLPGGEEIVFV 192

Query: 365 KFSGEK----------FAIGVMK--KDGSQERLLVEDSNLQAPTW-----SPSGRSLIFS 407
           +   +             I   +   D S + LL      +  ++     S  GR L+ +
Sbjct: 193 RKVADDDVPAGEENLHRRIWRHRIGTDTSTDVLLDGPGLYEGHSYYGVRVSRDGRWLVVT 252

Query: 408 RKKDGDTGSKLYSIDLNGR 426
                     ++   L+GR
Sbjct: 253 ANVGTARRDSVWIASLDGR 271


>gi|301311889|ref|ZP_07217811.1| dipeptidyl-peptidase IV [Bacteroides sp. 20_3]
 gi|300829991|gb|EFK60639.1| dipeptidyl-peptidase IV [Bacteroides sp. 20_3]
          Length = 724

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 95/324 (29%), Gaps = 77/324 (23%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           ++ R     +++ +          D DG     ++ +   IL          +   + Y 
Sbjct: 68  YSYRTGNPVDTLFNARKARECTFTDFDGY---TISSTGHHILVW--------RDTESIYR 116

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS- 291
                 VY  D R +   K I + +   + P FS +G+       +D  + I   D  + 
Sbjct: 117 RSTKAVVYDYDVRRN-YVKPISDAKGKQMIPTFSPDGRMCAYV--RDNNIWIRKFDFDTE 173

Query: 292 ------NATER----LTNTLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                     +    +T+ ++    A     ++SPDS  + F    E +   Y MQ  G 
Sbjct: 174 VQVTKDGELNKILNGITDWVYEEEFAVTNLMAWSPDSEYLAFVRFDESEVPEYSMQMYGE 233

Query: 337 DQ------------------------KRISQDK-------EASYFDPVWS----PQGDLI 361
                                       +++D        E  ++ P  +    P    I
Sbjct: 234 GLYPGYYEYKYPKAGQKNSKVSVHSYSVVTKDTKEMKVPVEGDFYIPRITFTQNPDQLAI 293

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLL--------VEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                    F +          RL+        V+   L +  +  +G    F+   + D
Sbjct: 294 MTLNRQQNVFNMYYANPKSGVFRLILREENKCYVDSDWLTSIQFLNNG----FTYVSEQD 349

Query: 414 TGSKLYSIDLNGRNETLINTPAYA 437
             S +Y     G  +  +    + 
Sbjct: 350 GYSHIYLYSPTGVMQRQVTQGNWD 373



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 77/297 (25%), Gaps = 57/297 (19%)

Query: 195 VMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRA 249
           V D D   N              P FSP+ +  AY      +  +      +  T+    
Sbjct: 123 VYDYDVRRNYVKPISDAKGKQMIPTFSPDGRMCAYVRDNNIWIRKFDFDTEVQVTKDGEL 182

Query: 250 PKRIGNFRSMILA--------PRFSSNGKRALISVQKDEAMDIYSVDLQS---------- 291
            K +      +            +S + +        +  +  YS+ +            
Sbjct: 183 NKILNGITDWVYEEEFAVTNLMAWSPDSEYLAFVRFDESEVPEYSMQMYGEGLYPGYYEY 242

Query: 292 -----------------NATERLTNTLFINISASY---------SPDSSQIVFESDREGK 325
                            +   + T  + + +   +         +PD   I+  + ++  
Sbjct: 243 KYPKAGQKNSKVSVHSYSVVTKDTKEMKVPVEGDFYIPRITFTQNPDQLAIMTLNRQQNV 302

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI----AFTKFSGEKFAIGVMKKDGS 381
             +Y         + I +++   Y D  W      +     +         I +    G 
Sbjct: 303 FNMYYANPKSGVFRLILREENKCYVDSDWLTSIQFLNNGFTYVSEQDGYSHIYLYSPTGV 362

Query: 382 QERLLVEDSNLQAPTWSP---SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +R +    N     +     + ++  +   ++      +Y ID  G    L     
Sbjct: 363 MQRQVT-QGNWDVTKFLGVDENTKTFYYESAEESPIRRSIYKIDAKGVKTKLSTEEG 418


>gi|289621780|emb|CBI51691.1| unnamed protein product [Sordaria macrospora]
          Length = 897

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 96/237 (40%), Gaps = 25/237 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I  L+ S+++I F    + + + +A+       +L V+   +      K+ G+F SM   
Sbjct: 289 IHTLSISQNEIDFV-TINKSGEWLAFGASKLGQLL-VWEWQSE-SYILKQQGHFDSMNSL 345

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESD 321
             +S +G+R + +V  D  + ++  D +S       T       +  +S   + ++F S 
Sbjct: 346 -VYSPDGQRIV-TVADDGKIKVW--DTESGFCIVTFTEHTSGITACEFSKKGN-VLFTSS 400

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +G  + + +     + +  +  +  S+      P G+++A        F I +      
Sbjct: 401 LDGSIRAWDL-IRYRNFRTFTAPERLSFSCMAVDPSGEIVAAGSVD--SFDIHIWSVQTG 457

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +LL   S  + P     ++P+G  L+       D  ++++SI     N T  + P
Sbjct: 458 --QLLDRLSGHEGPVSSLAFAPNGGLLV---SGSWDRTARIWSI----FNRTQTSEP 505


>gi|158337426|ref|YP_001518601.1| dipeptidyl aminopeptidase family protein [Acaryochloris marina
           MBIC11017]
 gi|158307667|gb|ABW29284.1| dipeptidyl aminopeptidase family [Acaryochloris marina MBIC11017]
          Length = 675

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 7/102 (6%)

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV--MKKDGSQERLLVEDSN--LQAP 395
           R     +        SP G  +AF K       + V  + +  S  R +  D+   +   
Sbjct: 43  RELFFSDPEISGAQLSPDGQFLAFQKPLKGVINVWVKGINEPMSAARPVTADATSPIMIY 102

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSID---LNGRNETLINTP 434
            WS  GR +++ + K G+   +LY++D   + G+ +    TP
Sbjct: 103 FWSADGRYILYGQDKGGNENFRLYAVDPKTVGGQTQARDLTP 144



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 53/152 (34%), Gaps = 20/152 (13%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            A  SPD   + F+   +G   ++V  +    S  + ++ D  +      WS  G  I +
Sbjct: 54  GAQLSPDGQFLAFQKPLKGVINVWVKGINEPMSAARPVTADATSPIMIYFWSADGRYILY 113

Query: 364 TKFSGE--KFAIGVMKKDG----SQERLLVEDSNLQAPTWS-----PSGRSLIFSRKKDG 412
            +  G    F +  +        +Q R L     + A  ++     P+   +I       
Sbjct: 114 GQDKGGNENFRLYAVDPKTVGGQTQARDLTPFEGITAQVYAVPKRTPNE--VIIGLNDRN 171

Query: 413 DTGSKLYSIDLNGRNETLI-----NTPAYASD 439
                +Y ++L     TL+     N   + +D
Sbjct: 172 PQVHDVYRLNLTTGERTLLIQNDQNIAGWVTD 203



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/145 (13%), Positives = 50/145 (34%), Gaps = 18/145 (12%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTNTLFINISA----SYSPDS 313
           I   + S +G+           ++++   ++   +A   +T       S      +S D 
Sbjct: 52  ISGAQLSPDGQFLAFQKPLKGVINVWVKGINEPMSAARPVTADA---TSPIMIYFWSADG 108

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---------YFDPVWSPQGDLIAFT 364
             I++  D+ G E   +   +       +Q ++ +         Y  P  +P   +I   
Sbjct: 109 RYILYGQDKGGNENFRLYAVDPKTVGGQTQARDLTPFEGITAQVYAVPKRTPNEVIIGLN 168

Query: 365 KFSGEKFAIGVMKKDGSQERLLVED 389
             + +   +  +     +  LL+++
Sbjct: 169 DRNPQVHDVYRLNLTTGERTLLIQN 193


>gi|150008803|ref|YP_001303546.1| dipeptidyl aminopeptidase IV [Parabacteroides distasonis ATCC 8503]
 gi|298375925|ref|ZP_06985881.1| dipeptidyl-peptidase IV [Bacteroides sp. 3_1_19]
 gi|149937227|gb|ABR43924.1| dipeptidyl aminopeptidase IV [Parabacteroides distasonis ATCC 8503]
 gi|298266962|gb|EFI08619.1| dipeptidyl-peptidase IV [Bacteroides sp. 3_1_19]
          Length = 724

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 95/324 (29%), Gaps = 77/324 (23%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           ++ R     +++ +          D DG     ++ +   IL          +   + Y 
Sbjct: 68  YSYRTGNPVDTLFNARKARECTFTDFDGY---TISSTGHHILVW--------RDTESIYR 116

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS- 291
                 VY  D R +   K I + +   + P FS +G+       +D  + I   D  + 
Sbjct: 117 RSTKAVVYDYDVRRN-YVKPISDAKGKQMIPTFSPDGRMCAYV--RDNNIWIRKFDFDTE 173

Query: 292 ------NATER----LTNTLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                     +    +T+ ++    A     ++SPDS  + F    E +   Y MQ  G 
Sbjct: 174 VQVTKDGELNKILNGITDWVYEEEFAVTNLMAWSPDSEYLAFVRFDESEVPEYSMQMYGE 233

Query: 337 DQ------------------------KRISQDK-------EASYFDPVWS----PQGDLI 361
                                       +++D        E  ++ P  +    P    I
Sbjct: 234 GLYPGYYEYKYPKAGQKNSKVSVHSYSVVTKDTKEMKVPVEGDFYIPRITFTQNPDQLAI 293

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLL--------VEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                    F +          RL+        V+   L +  +  +G    F+   + D
Sbjct: 294 MTLNRQQNVFNMYYANPKSGVFRLILREENKCYVDSDWLTSIQFLNNG----FTYVSEQD 349

Query: 414 TGSKLYSIDLNGRNETLINTPAYA 437
             S +Y     G  +  +    + 
Sbjct: 350 GYSHIYLYSPTGVMQRQVTQGNWD 373



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 77/297 (25%), Gaps = 57/297 (19%)

Query: 195 VMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRA 249
           V D D   N              P FSP+ +  AY      +  +      +  T+    
Sbjct: 123 VYDYDVRRNYVKPISDAKGKQMIPTFSPDGRMCAYVRDNNIWIRKFDFDTEVQVTKDGEL 182

Query: 250 PKRIGNFRSMILA--------PRFSSNGKRALISVQKDEAMDIYSVDLQS---------- 291
            K +      +            +S + +        +  +  YS+ +            
Sbjct: 183 NKILNGITDWVYEEEFAVTNLMAWSPDSEYLAFVRFDESEVPEYSMQMYGEGLYPGYYEY 242

Query: 292 -----------------NATERLTNTLFINISASY---------SPDSSQIVFESDREGK 325
                            +   + T  + + +   +         +PD   I+  + ++  
Sbjct: 243 KYPKAGQKNSKVSVHSYSVVTKDTKEMKVPVEGDFYIPRITFTQNPDQLAIMTLNRQQNV 302

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI----AFTKFSGEKFAIGVMKKDGS 381
             +Y         + I +++   Y D  W      +     +         I +    G 
Sbjct: 303 FNMYYANPKSGVFRLILREENKCYVDSDWLTSIQFLNNGFTYVSEQDGYSHIYLYSPTGV 362

Query: 382 QERLLVEDSNLQAPTWSP---SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +R +    N     +     + ++  +   ++      +Y ID  G    L     
Sbjct: 363 MQRQVT-QGNWDVTKFLGVDENTKTFYYESAEESPIRRSIYKIDAKGVKTKLSTEEG 418


>gi|255014675|ref|ZP_05286801.1| dipeptidyl aminopeptidase IV [Bacteroides sp. 2_1_7]
          Length = 724

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 95/324 (29%), Gaps = 77/324 (23%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           ++ R     +++ +          D DG     ++ +   IL          +   + Y 
Sbjct: 68  YSYRTGNPVDTLFNARKARECTFTDFDGY---TISSTGHHILVW--------RDTESIYR 116

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS- 291
                 VY  D R +   K I + +   + P FS +G+       +D  + I   D  + 
Sbjct: 117 RSTKAVVYDYDVRRN-YVKPISDAKGKQMIPTFSPDGRMCAYV--RDNNIWIRKFDFDTE 173

Query: 292 ------NATER----LTNTLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                     +    +T+ ++    A     ++SPDS  + F    E +   Y MQ  G 
Sbjct: 174 VQVTKDGELNKILNGITDWVYEEEFAVTNLMAWSPDSEYLAFVRFDESEVPEYSMQMYGE 233

Query: 337 DQ------------------------KRISQDK-------EASYFDPVWS----PQGDLI 361
                                       +++D        E  ++ P  +    P    I
Sbjct: 234 GLYPGYYEYKYPKAGQKNSKVSVHSYSVVTKDTKEMKVPVEGDFYIPRITFTQNPDQLAI 293

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLL--------VEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                    F +          RL+        V+   L +  +  +G    F+   + D
Sbjct: 294 MTLNRQQNVFNMYYANPKSGVFRLILREENKCYVDSDWLTSIQFLNNG----FTYVSEQD 349

Query: 414 TGSKLYSIDLNGRNETLINTPAYA 437
             S +Y     G  +  +    + 
Sbjct: 350 GYSHIYLYSPTGVMQRQVTQGNWD 373



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 77/297 (25%), Gaps = 57/297 (19%)

Query: 195 VMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRA 249
           V D D   N              P FSP+ +  AY      +  +      +  T+    
Sbjct: 123 VYDYDVRRNYVKPISDAKGKQMIPTFSPDGRMCAYVRDNNIWIRKFDFDTEVQVTKDGEL 182

Query: 250 PKRIGNFRSMILA--------PRFSSNGKRALISVQKDEAMDIYSVDLQS---------- 291
            K +      +            +S + +        +  +  YS+ +            
Sbjct: 183 NKILNGITDWVYEEEFAVTNLMAWSPDSEYLAFVRFDESEVPEYSMQMYGEGLYPGYYEY 242

Query: 292 -----------------NATERLTNTLFINISASY---------SPDSSQIVFESDREGK 325
                            +   + T  + + +   +         +PD   I+  + ++  
Sbjct: 243 KYPKAGQKNSKVSVHSYSVVTKDTKEMKVPVEGDFYIPRITFTQNPDQLAIMTLNRQQNV 302

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI----AFTKFSGEKFAIGVMKKDGS 381
             +Y         + I +++   Y D  W      +     +         I +    G 
Sbjct: 303 FNMYYANPKSGVFRLILREENKCYVDSDWLTSIQFLNNGFTYVSEQDGYSHIYLYSPTGV 362

Query: 382 QERLLVEDSNLQAPTWSP---SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +R +    N     +     + ++  +   ++      +Y ID  G    L     
Sbjct: 363 MQRQVT-QGNWDVTKFLGVDENTKTFYYESAEESPIRRSIYKIDAKGVKTKLSTEEG 418


>gi|255546059|ref|XP_002514089.1| conserved hypothetical protein [Ricinus communis]
 gi|223546545|gb|EEF48043.1| conserved hypothetical protein [Ricinus communis]
          Length = 831

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 82/252 (32%), Gaps = 29/252 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S  + + + V D D         S    +++ +F P    +A A         V L DT 
Sbjct: 587 SASLDSFVRVFDVDTNATIATLESPPSEVWQMQFDPKGTTLAVA---GGGSASVNLWDTA 643

Query: 246 IDRAPKRIG-------------NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             +    +              + +  +L+  +S +GKR       D  + ++ V  ++ 
Sbjct: 644 TWKQIASLSVPRPEGPKPSDKNSSKKFVLSVAWSPDGKRLA-CGSMDGTISVFDV-ARAK 701

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L        S  YSP   +++F +  +    +Y   S G           +     
Sbjct: 702 FLHHLEGHFMPVRSLVYSPIDPRVLFSASDDAHVHMY--DSEGKSLITAMSGHASWVLSV 759

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             SP G  IA T  S     +  +    + + +      + A  + P G +        G
Sbjct: 760 DASPDGAAIA-TGSSDRTVRLWDLNMRAAVQTMSNHSDQVWAVAFRPPGGT--------G 810

Query: 413 DTGSKLYSIDLN 424
           D   +L S+  +
Sbjct: 811 DRNGRLASVSDD 822


>gi|168701471|ref|ZP_02733748.1| WD-40 repeat protein, beta transducin-like protein [Gemmata
           obscuriglobus UQM 2246]
          Length = 1186

 Score = 53.5 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/297 (13%), Positives = 87/297 (29%), Gaps = 35/297 (11%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI-KEGKDRLRVE-----FRLWDVKD 135
           +S       + +P++  +    ++     +  G +      +RL V       +L DV  
Sbjct: 328 VSSGRVPIYVISPETGNQLTRMDAGSGDAV--GALHFSNDGNRLAVGGDDGVLQLMDVSS 385

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            +++            R + H       +     +             + S     ++ +
Sbjct: 386 GRELG-----------RTVPHRGGIVEVRYNPNPR----------VNVLASLGTDRTVKI 424

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D    N+  L            +S + Q +A  T     IL V      I   P  +  
Sbjct: 425 WDF-AQNLTTLVSIGGVTPSCLAWSNDGQALALGT-TTGQILIVSSQGRLIRELPPVLVE 482

Query: 256 FRSMILAPR-FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDS 313
            R + ++   F+   +   +    +       V   S             +SA   S D 
Sbjct: 483 KRPVAVSQVLFAPGDQELAVGGAANGRGWTGLVSAYSGGPRVTVPGHSNRVSAVDVSVDG 542

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            ++V  S    + + +V Q++    +          +   W+  G  IA+   +   
Sbjct: 543 RRVV--SSGGNQHETFVWQADDGAVQHRLIGTGHGVWAVAWAKDGKSIAWGTRNERN 597



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 55/380 (14%), Positives = 108/380 (28%), Gaps = 58/380 (15%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV--IKEGKDRLRV----EFRLWD 132
           F                  P        G    + G+V    +G   + V      R WD
Sbjct: 227 FKPEGALPALASPPKSGGRPLLTL--DAGGHTGIVGKVFFTPKGDRVITVGEDKAVRFWD 284

Query: 133 VKDRKQIIGKKFFSSPA---SWRKIA------------HT-------------ISDDIYQ 164
               + +   +F + P    S +  A            H              IS +   
Sbjct: 285 PVSNETVKTIRFPAGPGKEGSLQAAAISRSGKRLAVAGHKLAGVSSGRVPIYVISPETGN 344

Query: 165 SITG---EKGDFNSRILFVS--ESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPR 218
            +T      GD    + F +    +  G     L +MD   G  +    P R  I+   R
Sbjct: 345 QLTRMDAGSGDAVGALHFSNDGNRLAVGGDDGVLQLMDVSSGRELGRTVPHRGGIVEV-R 403

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++PN +    A+   +  ++++     +       G   S +    +S++G+   +    
Sbjct: 404 YNPNPRVNVLASLGTDRTVKIWDFAQNLTTLVSIGGVTPSCL---AWSNDGQALALGTTT 460

Query: 279 DEAMDIYSVDLQSNATERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                I  V  Q      L                ++P   ++       G+    ++ +
Sbjct: 461 G---QILIVSSQGRLIRELPPVLVEKRPVAVSQVLFAPGDQELAVGGAANGRGWTGLVSA 517

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSN 391
                +               S  G  +      G +    V + D    Q RL+     
Sbjct: 518 YSGGPRVTVPGHSNRVSAVDVSVDGRRVV--SSGGNQHETFVWQADDGAVQHRLIGTGHG 575

Query: 392 LQAPTWSPSGRSLIFSRKKD 411
           + A  W+  G+S+ +  + +
Sbjct: 576 VWAVAWAKDGKSIAWGTRNE 595


>gi|324324157|gb|ADY19417.1| putative prolyl oligopeptidase family protein [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 652

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 52/338 (15%), Positives = 113/338 (33%), Gaps = 62/338 (18%)

Query: 143 KFFSSPASWRKIAHTISDDIYQS-------ITGEKGDFNSRILFVSES-----VVSGIIK 190
            F    A+W+   +     IY+        +T    D    +   +          G  K
Sbjct: 33  AFVKRTANWKDNTYRNHVWIYEKGKGKNYPLTNGDIDSTCPLWSPNSRDIAYLSPGGNGK 92

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-----EDILRVY----- 240
           N + V   DG     +T   + I    ++    +   Y T        +    +Y     
Sbjct: 93  NQIFVKSLDGYGGVQITDEEEGISTF-KWDHTGKGFYYITQSKECEEIKKRKELYGDFQH 151

Query: 241 ---------------LMDTRIDRAPKRIGNFRSMILAPRF-------SSNGKRALI---- 274
                              + D+  + I     +     F       S++GK+ +     
Sbjct: 152 VGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTDGKEFYIHDFDISNDGKKVVCMATP 211

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKE------- 326
           S+      D+Y +D+++   +++     +  S  +SP+ S+I +  S RE          
Sbjct: 212 SLNDYMNGDLYILDVEAEELQKMNVDKLLGGSICFSPEGSKICYSASIREKDYYRNHIQD 271

Query: 327 -QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             L +   N  +  +   + +++     W+ +G  I         + IG++ +DG+ E L
Sbjct: 272 STLEIYDMNTREVIQPLTNFDSTVMPLQWTAKG--ILIRWQDKTNYRIGLLAEDGTVEAL 329

Query: 386 LVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               D  +   + +  G  + +++    +T  ++Y  D
Sbjct: 330 SDNIDGFIMDASITRDGNHITYNKAITNET-FEIYLDD 366



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 8/86 (9%)

Query: 354 WSPQGDLIAFTKFSGE------KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  G  +AF K +        +  + + +K  G    L   D +   P WSP+ R + +
Sbjct: 25  ISDDGKNVAFVKRTANWKDNTYRNHVWIYEKGKGKNYPLTNGDIDSTCPLWSPNSRDIAY 84

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLIN 432
                G+  ++++   L+G     I 
Sbjct: 85  LS-PGGNGKNQIFVKSLDGYGGVQIT 109



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++ +        ++ + +     P+WSP   
Sbjct: 22  STNISDDGKNVAFVKRTANWKDNTYRNHVWIYEKGKGKNYPLT-NGDIDSTCPLWSPNSR 80

Query: 360 LIAFTKFSG-EKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            IA+    G  K  I V   DG    ++  E+  +    W  +G+   +  + 
Sbjct: 81  DIAYLSPGGNGKNQIFVKSLDGYGGVQITDEEEGISTFKWDHTGKGFYYITQS 133



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/280 (13%), Positives = 82/280 (29%), Gaps = 54/280 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
             S + + VA+           Y     I    K     + N       P +S N +   
Sbjct: 24  NISDDGKNVAFVKRTANWKDNTYRNHVWIYEKGKGKNYPLTNGDIDSTCPLWSPNSRDIA 83

Query: 274 I-SVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDRE-------- 323
             S   +    I+   L      ++T+    I+    +        + +  +        
Sbjct: 84  YLSPGGNGKNQIFVKSLDGYGGVQITDEEEGISTF-KWDHTGKGFYYITQSKECEEIKKR 142

Query: 324 ----------GKEQ---------LYVMQSNGSDQK------RISQDKEASYFDPVWSPQG 358
                     GKE          +  +  N  +++      +++  KE    D   S  G
Sbjct: 143 KELYGDFQHVGKEHQNNCLCYIEIEKVIQNDKEEREINGVYQLTDGKEFYIHDFDISNDG 202

Query: 359 DLIA-FTKFSGEKF---AIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS------ 407
             +      S   +    + ++  +  + + + V+     +  +SP G  + +S      
Sbjct: 203 KKVVCMATPSLNDYMNGDLYILDVEAEELQKMNVDKLLGGSICFSPEGSKICYSASIREK 262

Query: 408 ---RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              R    D+  ++Y ++     + L N  +     QW  
Sbjct: 263 DYYRNHIQDSTLEIYDMNTREVIQPLTNFDSTVMPLQWTA 302



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 8/117 (6%)

Query: 260 ILAPRFSSNGKRALISVQ------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           + +   S +GK      +            ++  +        LTN    +    +SP+S
Sbjct: 20  VSSTNISDDGKNVAFVKRTANWKDNTYRNHVWIYEKGKGKNYPLTNGDIDSTCPLWSPNS 79

Query: 314 SQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             I + S    GK Q++V   +G    +I+ ++E       W   G    +   S E
Sbjct: 80  RDIAYLSPGGNGKNQIFVKSLDGYGGVQITDEEEGISTFK-WDHTGKGFYYITQSKE 135


>gi|256841160|ref|ZP_05546667.1| dipeptidyl aminopeptidase IV [Parabacteroides sp. D13]
 gi|256737003|gb|EEU50330.1| dipeptidyl aminopeptidase IV [Parabacteroides sp. D13]
          Length = 724

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 48/324 (14%), Positives = 95/324 (29%), Gaps = 77/324 (23%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           ++ R     +++ +          D DG     ++ +   IL          +   + Y 
Sbjct: 68  YSYRTGNPVDTLFNARKARECTFTDFDGY---TISSTGHHILVW--------RDTESIYR 116

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS- 291
                 VY  D R +   K I + +   + P FS +G+       +D  + I   D  + 
Sbjct: 117 RSTKAVVYDYDVRRN-YVKPISDAKGKQMIPTFSPDGRMCAYV--RDNNIWIRKFDFDTE 173

Query: 292 ------NATER----LTNTLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                     +    +T+ ++    A     ++SPDS  + F    E +   Y MQ  G 
Sbjct: 174 VQVTKDGELNKILNGITDWVYEEEFAVTNLMAWSPDSEYLAFVRFDESEVPEYSMQMYGE 233

Query: 337 DQ------------------------KRISQDK-------EASYFDPVWS----PQGDLI 361
                                       +++D        E  ++ P  +    P    I
Sbjct: 234 GLYPGYYEYKYPKAGQKNSKVSVHSYSVVTKDTKEMKVPVEGDFYIPRITFTQNPDQLAI 293

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLL--------VEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                    F +          RL+        V+   L +  +  +G    F+   + D
Sbjct: 294 MTLNRQQNVFNMYYANPKSGVFRLILREENKCYVDSDWLTSIQFLNNG----FTYVSEQD 349

Query: 414 TGSKLYSIDLNGRNETLINTPAYA 437
             S +Y     G  +  +    + 
Sbjct: 350 GYSHIYLYSPTGVMQRQVTQGNWD 373



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/297 (11%), Positives = 77/297 (25%), Gaps = 57/297 (19%)

Query: 195 VMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRA 249
           V D D   N              P FSP+ +  AY      +  +      +  T+    
Sbjct: 123 VYDYDVRRNYVKPISDAKGKQMIPTFSPDGRMCAYVRDNNIWIRKFDFDTEVQVTKDGEL 182

Query: 250 PKRIGNFRSMILA--------PRFSSNGKRALISVQKDEAMDIYSVDLQS---------- 291
            K +      +            +S + +        +  +  YS+ +            
Sbjct: 183 NKILNGITDWVYEEEFAVTNLMAWSPDSEYLAFVRFDESEVPEYSMQMYGEGLYPGYYEY 242

Query: 292 -----------------NATERLTNTLFINISASY---------SPDSSQIVFESDREGK 325
                            +   + T  + + +   +         +PD   I+  + ++  
Sbjct: 243 KYPKAGQKNSKVSVHSYSVVTKDTKEMKVPVEGDFYIPRITFTQNPDQLAIMTLNRQQNV 302

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI----AFTKFSGEKFAIGVMKKDGS 381
             +Y         + I +++   Y D  W      +     +         I +    G 
Sbjct: 303 FNMYYANPKSGVFRLILREENKCYVDSDWLTSIQFLNNGFTYVSEQDGYSHIYLYSPTGV 362

Query: 382 QERLLVEDSNLQAPTWSP---SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            +R +    N     +     + ++  +   ++      +Y ID  G    L     
Sbjct: 363 MQRQVT-QGNWDVTAFLGVDENTKTFYYESAEESPIRRSIYKIDAKGVKTKLSTEEG 418


>gi|115391707|ref|XP_001213358.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|121739212|sp|Q0CQ54|HIR1_ASPTN RecName: Full=Protein hir1
 gi|114194282|gb|EAU35982.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 999

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 71/211 (33%), Gaps = 18/211 (8%)

Query: 220 SPNQQKVA------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           SP+  ++       Y      + +R     ++  +    + N    I   RFS NGK   
Sbjct: 49  SPDGSRLVTAAGDGYVRIWSTEAIRNTDDSSQKPKQLASMSNHSGTIHTVRFSPNGKYLA 108

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            S   D+ + IY++D   N     T     + S   S      V        E+L  +  
Sbjct: 109 -SGADDKIVCIYTLDA--NPPSHSTFGWSYDSSILVSVGLDSKVVVWSGHTFEKLKTLSV 165

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFSGEKFAIGVMKKDGSQE-RL 385
           + S  K I+ D    YF    S    +  F          + ++    V++   S   + 
Sbjct: 166 HQSHVKGITFDPANKYFATA-SDDRTVKIFRFTSPAPNSTAHDQMNNFVLETTISAPFQN 224

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
               +  +  +WSP G  +  +   +G   S
Sbjct: 225 SPLTAYFRRCSWSPDGMHIAAANAVNGPVSS 255



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 42/264 (15%), Positives = 87/264 (32%), Gaps = 32/264 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             +    +   RFSPN + +A  +  D+ I+ +Y +D      P       S   +   S
Sbjct: 88  MSNHSGTIHTVRFSPNGKYLA--SGADDKIVCIYTLDA---NPPSHSTFGWSYDSSILVS 142

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FES---D 321
                 ++         + ++ +  +  + +T        A+ S D +  +  F S   +
Sbjct: 143 VGLDSKVVVWSGHTFEKLKTLSVHQSHVKGITFDPANKYFATASDDRTVKIFRFTSPAPN 202

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTK-FSGEKFAIGVMKKD 379
               +Q+       +           +YF    WSP G  IA     +G   ++ ++ + 
Sbjct: 203 STAHDQMNNFVLETTISAPFQNSPLTAYFRRCSWSPDGMHIAAANAVNGPVSSVAIINRG 262

Query: 380 G--SQERLLVEDSNLQAPTWSPS---------------GRSLIFSRKKDGDTGSKLYSID 422
                  L+  ++ ++   +SP                G+++       GD    ++ I 
Sbjct: 263 SWDGDINLIGHEAPVEVCAFSPRLYSTQPPNKQTPDNQGQAVTVIACAGGDKSLSIW-IT 321

Query: 423 LNGRNETLINTPA--YASDPQWVG 444
            N R   +    A    SD  W  
Sbjct: 322 TNPRPIVVAQELAAKSISDLAWSP 345


>gi|120406865|ref|YP_956694.1| WD40 domain-containing protein [Mycobacterium vanbaalenii PYR-1]
 gi|119959683|gb|ABM16688.1| WD40 domain protein beta Propeller [Mycobacterium vanbaalenii
           PYR-1]
          Length = 997

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 69/244 (28%), Gaps = 35/244 (14%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-------PNQQKVAY 228
           ++ F S+  + G++         D     Y+T + + I   PR S        +  K+  
Sbjct: 523 KVKFPSDRGLLGLLPVQNREAKPDPYGE-YVTWTENTIFNGPRMSIAKLVATADGYKLVE 581

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-AMDIYSV 287
                                    GN         + + G+             DIY +
Sbjct: 582 QRIFSPQWY-------EGTDYATDFGNATRFYEGASWHAGGRYLKYQTTTTGLNYDIYLL 634

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D  +    +LT  L  N S   SPD   + F S R     L  M          +  +  
Sbjct: 635 DTATGERRQLTTDLDYNESGDISPDGRSVYFSSARG----LDRMDV-------FTALERP 683

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--------GSQERLLVEDSNLQAPTWSP 399
           S  D    PQ   ++            +M  D          Q  ++  D  ++  +W P
Sbjct: 684 SLIDSAAFPQIGRVSLWNNRRSMNEPWLMNLDAGQQQGGYSGQPIVIDPDWTIRGWSWFP 743

Query: 400 SGRS 403
               
Sbjct: 744 DSTR 747



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 349 YFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIF 406
           Y    W   G  + + T  +G  + I ++     + R L  D +  ++   SP GRS+ F
Sbjct: 606 YEGASWHAGGRYLKYQTTTTGLNYDIYLLDTATGERRQLTTDLDYNESGDISPDGRSVYF 665

Query: 407 SRKKDGDT 414
           S  +  D 
Sbjct: 666 SSARGLDR 673


>gi|332876559|ref|ZP_08444321.1| peptidase, S9A/B/C family, catalytic domain protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332685526|gb|EGJ58361.1| peptidase, S9A/B/C family, catalytic domain protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 762

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/287 (12%), Positives = 91/287 (31%), Gaps = 38/287 (13%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF---SPNQQ 224
            EKG     +        + I  +++ V DRDG + R L+       +   +   SP+ +
Sbjct: 171 DEKGAA--PVASPDGKRQAYIKNDNVYVSDRDGRHERALSNDGTAGNYYSSWLKWSPDGK 228

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            V            VY +++      + I + +       ++  G               
Sbjct: 229 YVCANKIRPAQKRYVYYVESSPKSQLQPILHQQE------YAKPGDELRF-------KVP 275

Query: 285 YSVDLQSNAT----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              ++++         + +  +      +  D   + FE +  G +   V++ +    K 
Sbjct: 276 CIFNVETGQAVIPSTEVFDRQYDLYGPEWKEDGKAVTFEYNERGHKTYRVLELDAETGKV 335

Query: 341 ISQDKEASYFDPVWSP-------QGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNL 392
            +  +E+S     +S         G  + +         + ++  + G   R + +  + 
Sbjct: 336 RTLVEESSPTFVNYSRMFRHVLKGGKEMIWMSERDNWNHLYMIDMEKGKVSRQITK-GDW 394

Query: 393 QAPTWSP---SGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLIN 432
                       + + F+      K+       Y I+++G+  T + 
Sbjct: 395 VVRRVLKVDEDNQVIYFTASGVNPKEDPYHVHYYKINMDGKQMTCLT 441


>gi|332662597|ref|YP_004445385.1| secreted prolyl oligopeptidase family protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332331411|gb|AEE48512.1| secreted prolyl oligopeptidase family protein [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 636

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 49/137 (35%), Gaps = 3/137 (2%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             S+SPD S+++  S+  G   LY +         I++    S F   + P    I +  
Sbjct: 45  GGSFSPDESKLLVHSNETGIFNLYEINLADQSMTAITKSTTESIFAVDYVPGTGEILYAA 104

Query: 366 FSGEK--FAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             G      + ++K DG  + L            WS   ++L +   K  +    LY + 
Sbjct: 105 DKGGNEIDHLYLLKADGMVQDLTPAPKEKANFFGWSQDKKALYYISNKRDERFFDLYKMG 164

Query: 423 LNGRNETLINTPAYASD 439
           +     TL+       D
Sbjct: 165 VGDWKATLLYQNNEGYD 181



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 12/87 (13%), Positives = 28/87 (32%), Gaps = 2/87 (2%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFS 407
               +SP    +         F +  +         + + +     A  + P    ++++
Sbjct: 44  GGGSFSPDESKLLVHSNETGIFNLYEINLADQSMTAITKSTTESIFAVDYVPGTGEILYA 103

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTP 434
             K G+    LY +  +G  + L   P
Sbjct: 104 ADKGGNEIDHLYLLKADGMVQDLTPAP 130


>gi|311898205|dbj|BAJ30613.1| putative dipeptidyl-peptidase [Kitasatospora setae KM-6054]
          Length = 705

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 69/242 (28%), Gaps = 58/242 (23%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---IYSVDLQSNATERLT 298
            DT   +  +          +   S +G R L    + E      ++ +D  + A   L 
Sbjct: 7   HDTFPRQYARTGRFSAGAPRSFSVSPDGARVLFLRSRGEGAPANLLWRLDTATGAETVLA 66

Query: 299 N--------------------TLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQS 333
           +                          SA     +        VF        +L+ + +
Sbjct: 67  DPEVLLGGGAEELSAAELARRERSRETSAGIVGYALDAAGRTAVFAL----SGRLFAVDT 122

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---- 389
                + +         DP  SP G  +A+   +G    + V   DG  +RLL       
Sbjct: 123 GTGAAREL--PAATPLLDPRPSPDGTHVAYATPAG---ELRVSAVDGGGDRLLAGPEADG 177

Query: 390 --------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN--GRNETLINT 433
                            +   W+P G +L+ + + D     + +  D    GR    +  
Sbjct: 178 VSWGQAEFIAQEEMGRDRGYWWAPDGSALL-AARVDDTPVRRWWIADPANPGRPPVEVAY 236

Query: 434 PA 435
           PA
Sbjct: 237 PA 238


>gi|297189990|ref|ZP_06907388.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197718647|gb|EDY62555.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 392

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 77/214 (35%), Gaps = 35/214 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  +  DG     +   R Q+L  P  SP+   V    +  ED  R             +
Sbjct: 193 IARLRVDGKVA--VLEDRRQVLEWP--SPDSGVVPPTDFVAEDPDRRLPKALPDFGIEAQ 248

Query: 253 --IGNFRSMILAPR------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             I   +     P       F+ + +      Q  + ++IY +DL++   +R T+    +
Sbjct: 249 DFIEGGKGDGTPPAAIVFYAFAPDRRGLA---QPYQGLEIYRLDLRAGRVQRQTDNDEYD 305

Query: 305 ISASYSPDSSQIVFESDREGK-----EQLYVMQSNGSDQ--KRISQDK---EASYFDPVW 354
            +   +PD   +V ESD +         LY ++ +G+ +  +R++       +   +PV 
Sbjct: 306 EAEGVTPDGRFVVVESDHDTGLSNAALDLYALRLDGTGRHLRRLTYATAQPGSEATNPVI 365

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           SP G  +             +   DG+    L  
Sbjct: 366 SPDGRSMLHE----------LHSADGTSSIQLTT 389



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 36/107 (33%), Gaps = 19/107 (17%)

Query: 317 VFESDREGKEQ------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            F  DR G  Q      +Y +       +R + + E    + V +P G  +         
Sbjct: 268 AFAPDRRGLAQPYQGLEIYRLDLRAGRVQRQTDNDEYDEAEGV-TPDGRFVVVESDHDTG 326

Query: 371 F-----AIGVMKKDGSQ--ERLLV-----EDSNLQAPTWSPSGRSLI 405
                  +  ++ DG+    R L        S    P  SP GRS++
Sbjct: 327 LSNAALDLYALRLDGTGRHLRRLTYATAQPGSEATNPVISPDGRSML 373


>gi|332665581|ref|YP_004448369.1| hypothetical protein Halhy_3644 [Haliscomenobacter hydrossis DSM
           1100]
 gi|332334395|gb|AEE51496.1| hypothetical protein Halhy_3644 [Haliscomenobacter hydrossis DSM
           1100]
          Length = 1180

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 63/165 (38%), Gaps = 17/165 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--------RFSSNGKR 271
           SP+  KV Y   D      VYL D + ++  K         L           +S  G++
Sbjct: 308 SPDGNKVVYVLNDLGRT-SVYLYDLQQNKKTKIFREGYRNALQATDFTYPLVAWSPTGQQ 366

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYS---PDSSQIVFESDREGKEQ 327
             +  ++ + + + + D+     +++TN  L       YS    D+  +VF ++  G+  
Sbjct: 367 LTLLYERRDNLKLATYDVF---KKKMTNELLSEQYQRVYSLDYVDNFSLVFSAEVSGQSD 423

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL-IAFTKFSGEKF 371
           +++        +RI+ D        V + +    I FT    + F
Sbjct: 424 IFIYTPRTRQSQRITADIYDDLDATVVNVRNRKGILFTSNRPDIF 468



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 47/137 (34%), Gaps = 15/137 (10%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-------ISA--SYSPDSSQ 315
            S +G + +  +       +Y  DLQ N   ++    + N            ++SP   Q
Sbjct: 307 LSPDGNKVVYVLNDLGRTSVYLYDLQQNKKTKIFREGYRNALQATDFTYPLVAWSPTGQQ 366

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFA 372
           +    +R    +L         +K+++ +  +  +  V+S        + F+     +  
Sbjct: 367 LTLLYERRDNLKLATYDVF---KKKMTNELLSEQYQRVYSLDYVDNFSLVFSAEVSGQSD 423

Query: 373 IGVMKKDGSQERLLVED 389
           I +      Q + +  D
Sbjct: 424 IFIYTPRTRQSQRITAD 440



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 58/178 (32%), Gaps = 29/178 (16%)

Query: 218 RFSPNQQKVAYATYDDED----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +SP  Q++       ++       V+      +   ++     S+     FS      +
Sbjct: 359 AWSPTGQQLTLLYERRDNLKLATYDVFKKKMTNELLSEQYQRVYSLDYVDNFS-----LV 413

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY--SPDSSQIVFESDRE-------- 323
            S +     DI+    ++  ++R+T  ++ ++ A+     +   I+F S+R         
Sbjct: 414 FSAEVSGQSDIFIYTPRTRQSQRITADIYDDLDATVVNVRNRKGILFTSNRPDIFLRPIK 473

Query: 324 -------GKEQLYVMQSNGS--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                  G   ++     G   +  R++    AS   P+        ++       + 
Sbjct: 474 PDSILPVGSLDVFYYDLKGEIRELVRVTNTPLASERYPMGV-DSTYFSYLSDRHGIYN 530


>gi|297263225|ref|XP_001101566.2| PREDICTED: WD repeat-containing protein 51B-like [Macaca mulatta]
          Length = 478

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 91/254 (35%), Gaps = 12/254 (4%)

Query: 160 DDIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           D + +          + + F      + +      L + +       Y       ++   
Sbjct: 7   DPVLERYFKGHKAAITSLDFSPNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSV 66

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FSP+   +A A+ D    +R+++ D R   +  +       + +  FS++G+    +  
Sbjct: 67  QFSPHGNLLASASRD--RTVRLWIPDKRGKFSEFKAHTAP--VRSVDFSADGQFLA-TAS 121

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D+++ ++S+  Q      L         A +SPD   IV  S+    + + +  +    
Sbjct: 122 EDKSIKVWSMYRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSE---DKTIKIWDTTNKQ 177

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 D         ++P G  IA +  S +   +  ++ +   +   V    +   ++
Sbjct: 178 CVNNFSDSVGFANFVDFNPSGTCIA-SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISF 236

Query: 398 SPSGRSLIFSRKKD 411
            PSG  LI +    
Sbjct: 237 HPSGNYLITASSDG 250



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 95/302 (31%), Gaps = 45/302 (14%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           WD      ++   F     ++R + H   D +        G            + S    
Sbjct: 38  WDTF----LMLWNFKPHARAYRYVGHK--DVVTSVQFSPHG----------NLLASASRD 81

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            ++ +   D         +    +    FS + Q +A A+ D      + +      R  
Sbjct: 82  RTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDK----SIKVWSMYRQRFL 137

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-- 308
             +      +   +FS +G R ++S  +D+ + I+     +   ++  N    ++  +  
Sbjct: 138 YSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIW----DTTN-KQCVNNFSDSVGFANF 191

Query: 309 --YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             ++P  + I         + + V     +   +  Q          + P G+ +     
Sbjct: 192 VDFNPSGTCIA---SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASS 248

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSID 422
            G    + ++     + RL+        P    ++S  G   +F+     DT   L+  +
Sbjct: 249 DGTLKILDLL-----EGRLIYTLQGHTGPVFTVSFSKGGE--LFASG-GADTQVLLWRTN 300

Query: 423 LN 424
            +
Sbjct: 301 FD 302



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 11/124 (8%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQ 357
                 S  +SP+  Q+   S        ++M  N     R  +    +       +SP 
Sbjct: 17  HKAAITSLDFSPNGKQLATAS-----WDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPH 71

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G+L+A          + +  K G         + +++  +S  G+ L  + +   D   K
Sbjct: 72  GNLLASASRD-RTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASE---DKSIK 127

Query: 418 LYSI 421
           ++S+
Sbjct: 128 VWSM 131


>gi|297155616|gb|ADI05328.1| serine/threonine protein kinase [Streptomyces bingchenggensis
           BCW-1]
          Length = 777

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 72/219 (32%), Gaps = 32/219 (14%)

Query: 218 RFSPNQQKVA----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            FSP+   +A    YAT    D+     + T      ++   + S+     FS +GK   
Sbjct: 520 AFSPDGSLLASIDDYATITLWDVPSGRKVATLHGDKNQKDSGYDSV----AFSRDGKTLA 575

Query: 274 ISVQ--------KDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREG 324
            S          +        VD        +T+         +++ D   ++  +    
Sbjct: 576 YSSNTTITVWDVRSRDKVATLVDPAG----PVTDVNQGWVACVTFTRDGRTLIASTTE-- 629

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-- 382
             +L+             Q  +   +D   SP G ++A          + +      +  
Sbjct: 630 -NKLHFWDIGRRSITATVQGGKDGLYDLALSPDGKVLA---ADAGIEGVRLWDTGSRKQI 685

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           E L      + +  +SP G+SL  + ++ G    +++S 
Sbjct: 686 ETLTFTSQMIGSVAFSPDGKSLA-ASEQGG--AFQIWST 721



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 69/264 (26%), Gaps = 34/264 (12%)

Query: 200 GANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNF 256
           G         + D +L    FSP+ + +A    D    LR Y    +          G  
Sbjct: 454 GRTPMVTLSGKFDSMLTAVEFSPDGRFIALGDLDGGVELR-YSPSLKTAAILSVPGEGGV 512

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT------LFINISASYS 310
            +      FS +G         D+   I   D+ S       +          + S ++S
Sbjct: 513 DNATGDVAFSPDGSLLA---SIDDYATITLWDVPSGRKVATLHGDKNQKDSGYD-SVAFS 568

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSD--------QKRISQDKEASYFDPVWSPQGDLIA 362
            D   + + S       + V      D           ++   +       ++  G  + 
Sbjct: 569 RDGKTLAYSS----NTTITVWDVRSRDKVATLVDPAGPVTDVNQGWVACVTFTRDGRTLI 624

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYS 420
            +        +             V+           SP G+ L       G  G +L+ 
Sbjct: 625 ASTTEN---KLHFWDIGRRSITATVQGGKDGLYDLALSPDGKVLA---ADAGIEGVRLWD 678

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
                + ETL  T        +  
Sbjct: 679 TGSRKQIETLTFTSQMIGSVAFSP 702



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 5/99 (5%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             +N L   D    +I          L++   SP+ + +A     D  I  V L DT   
Sbjct: 627 TTENKLHFWDIGRRSITATVQGGKDGLYDLALSPDGKVLA----ADAGIEGVRLWDTGSR 682

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           +  + +     MI +  FS +GK    + ++  A  I+S
Sbjct: 683 KQIETLTFTSQMIGSVAFSPDGKSLA-ASEQGGAFQIWS 720


>gi|258593768|emb|CBE70109.1| exported protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 422

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 85/226 (37%), Gaps = 16/226 (7%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            + +  V+  V       S+ V + DG+N   + P    ++ E   SP+ Q++AY     
Sbjct: 23  ATTLSKVAYIVSEDQGTTSVLVQNADGSNPVRV-PGLSGVISEIAISPSGQRLAYVIGGT 81

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMI----LAPRFSS---NGKRALISVQKDEAMDIYS 286
              L   +    +D     +G  R++      A  FS    +    L   +      +  
Sbjct: 82  TTGLE-QVFVAELDEHSNIVGVRRNVSDELPTARSFSPKFLDDNHLLYLSENQGDRILVL 140

Query: 287 VDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---S 342
           +DL +   ++++     I+    Y+ D    +F       +++          + +   +
Sbjct: 141 IDLLTGGKQKISAISGTIDTVIRYNIDDKDALFF---GLNKEMRRFDLPTGPLRSVVANT 197

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               A  ++ +   +  LI  T+ + E+  I  M+ DG+  +++ E
Sbjct: 198 GSVSALTYEKMGIFENSLIFSTQVTPEERVISHMRLDGTGLKVVAE 243



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 37/224 (16%), Positives = 80/224 (35%), Gaps = 23/224 (10%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--QKDEA 281
            KVAY   +D+    V + +      P R+     +I     S +G+R    +       
Sbjct: 27  SKVAYIVSEDQGTTSVLVQNAD-GSNPVRVPGLSGVISEIAISPSGQRLAYVIGGTTTGL 85

Query: 282 MDIYSVDLQS-----NATERLTNTLFINISASYSP---DSSQIVFESDREGKEQLYVMQS 333
             ++  +L            +++ L    + S+SP   D + +++ S+ +G   L ++  
Sbjct: 86  EQVFVAELDEHSNIVGVRRNVSDEL--PTARSFSPKFLDDNHLLYLSENQGDRILVLIDL 143

Query: 334 NGSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSN 391
               +++IS           ++    D + F    G    +          R ++    +
Sbjct: 144 LTGGKQKISAISGTIDTVIRYNIDDKDALFF----GLNKEMRRFDLPTGPLRSVVANTGS 199

Query: 392 LQAPTWSPSG---RSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + A T+   G    SLIFS +        +  + L+G    ++ 
Sbjct: 200 VSALTYEKMGIFENSLIFSTQVT-PEERVISHMRLDGTGLKVVA 242


>gi|239929890|ref|ZP_04686843.1| peptide hydrolase [Streptomyces ghanaensis ATCC 14672]
 gi|291438225|ref|ZP_06577615.1| peptide hydrolase [Streptomyces ghanaensis ATCC 14672]
 gi|291341120|gb|EFE68076.1| peptide hydrolase [Streptomyces ghanaensis ATCC 14672]
          Length = 615

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 75/270 (27%), Gaps = 15/270 (5%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +      L   DR     R +T   +    +   SP+ + + +    D D   V+   
Sbjct: 54  VSNATGTYELYAWDRSTGEQRQVTDRPNG-TTDGVLSPDGEWIWWFDDKDGDEFGVWRRQ 112

Query: 244 TRIDRAPKR--IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                  +    G   S         +G+ A++    DE      +         +    
Sbjct: 113 PFSGGEDELAAPGLGPSYPAGLALGRDGRTAVVGRSTDEDGTTIHLVRTGEPPVEIYRHR 172

Query: 302 FINISASYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEAS------YFDP 352
                   S D S I  E    G      L V++ +G+    +   +  +          
Sbjct: 173 ESAGVGDLSHDGSLIAVEHTEHGDAMHSALRVLRPDGTTVAELDDTEGGAEELGLEVLGF 232

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
                   +        ++   V      +E  L  E     +  W P G  L+ +    
Sbjct: 233 APVAGDTRLLVGHQRRGRWEPMVWDVATGEETDLALELPGDVSAEWYPDGTGLLIA--HG 290

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            +   +++  DL  R    I TP  A    
Sbjct: 291 FEARGEIFRYDLAERRLEKIPTPRGAVSGA 320



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/189 (13%), Positives = 60/189 (31%), Gaps = 11/189 (5%)

Query: 260 ILAPRFS---SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +  P ++    +  R+L         ++Y+ D  +    ++T+          SPD   I
Sbjct: 38  VSLPDWAEDAPD--RSLFVSNATGTYELYAWDRSTGEQRQVTDRPNGTTDGVLSPDGEWI 95

Query: 317 VFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGD-LIAFTKFSGEKFA 372
            +  D++G E  ++  Q     +  ++       +         G   +       +   
Sbjct: 96  WWFDDKDGDEFGVWRRQPFSGGEDELAAPGLGPSYPAGLALGRDGRTAVVGRSTDEDGTT 155

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRN-ETL 430
           I +++       +     +      S  G  +     + GD   S L  +  +G     L
Sbjct: 156 IHLVRTGEPPVEIYRHRESAGVGDLSHDGSLIAVEHTEHGDAMHSALRVLRPDGTTVAEL 215

Query: 431 INTPAYASD 439
            +T   A +
Sbjct: 216 DDTEGGAEE 224


>gi|86742726|ref|YP_483126.1| WD-40 repeat-containing serine/threonin protein kinase [Frankia sp.
           CcI3]
 gi|86569588|gb|ABD13397.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           CcI3]
          Length = 916

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 57/171 (33%), Gaps = 20/171 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------FSSNGKR 271
            F+P+   +A        +  + + D      P+R    R+ + AP        S +G+ 
Sbjct: 722 AFTPDGDSLA-----VGGVGHLSVWDVTAAGQPRR----RAQLTAPATVRKLLVSPDGRW 772

Query: 272 ALISVQKDEAMDIYSVDLQS-NATERLT---NTLFINISASYSPDSSQIVFESDREGKEQ 327
             ++   D         L S     RLT   +      S + S D   +   S   G+  
Sbjct: 773 LAVASTSDGGSLTEIYGLDSPRGLHRLTAIASRPGQAGSIALSADGRVLA-VSTPAGQVT 831

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           L+ M+S     +R +     +    V+ P G        +G+   +  +  
Sbjct: 832 LWDMRSPSRPVQRATLPVGTAPTATVFGPLGHEGVLAVVAGDAVRLWQLDL 882



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 53/151 (35%), Gaps = 14/151 (9%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG--SDQKRISQ-DKEASYFDPV 353
           L        S + S D   +       G +++  +   G   + + +++  + A      
Sbjct: 667 LRGHTGAVASVAVSGDGRTLA----SAGADRVVRLWDIGHPQNPRALAELPQPAEVTSLA 722

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           ++P GD +A         ++  +   G   R   L   + ++    SP GR L  +   D
Sbjct: 723 FTPDGDSLAVGGV--GHLSVWDVTAAGQPRRRAQLTAPATVRKLLVSPDGRWLAVASTSD 780

Query: 412 GDTGSKLYSIDLNGRNETLINT---PAYASD 439
           G + +++Y +D       L      P  A  
Sbjct: 781 GGSLTEIYGLDSPRGLHRLTAIASRPGQAGS 811



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 69/231 (29%), Gaps = 30/231 (12%)

Query: 112 VTGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
               V   G  R           RLWD+   +          PA    +A          
Sbjct: 673 AVASVAVSGDGRTLASAGADRVVRLWDIGHPQNPRALAELPQPAEVTSLA---------- 722

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
                GD            V G+   S+  +   G   R    +    + +   SP+ + 
Sbjct: 723 -FTPDGDSL---------AVGGVGHLSVWDVTAAGQPRRRAQLTAPATVRKLLVSPDGRW 772

Query: 226 VAYATYDDEDIL-RVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +A A+  D   L  +Y +D+         I +      +   S++G+   +S      + 
Sbjct: 773 LAVASTSDGGSLTEIYGLDSPRGLHRLTAIASRPGQAGSIALSADGRVLAVSTPA-GQVT 831

Query: 284 IYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQS 333
           ++ +   S   +R T  +     +  + P   + V         +L+ +  
Sbjct: 832 LWDMRSPSRPVQRATLPVGTAPTATVFGPLGHEGVLAVVAGDAVRLWQLDL 882


>gi|7021151|dbj|BAA91394.1| unnamed protein product [Homo sapiens]
          Length = 546

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  DD     V + +      P      +  + +  +       L    
Sbjct: 158 AWHPHTNKFAVALLDD----SVRVYNASSTIVPSLKHRLQRNVASLAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIR 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  I  T  S   F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKILATTPS-AVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGSRLLFT 346



 Score = 36.5 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 37/338 (10%), Positives = 98/338 (28%), Gaps = 49/338 (14%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSI-----TGEKGDFNSRILFVSESVVSGII 189
           + + + G  + S P  +R     I+  + Q       T  + D  +R  F+         
Sbjct: 22  NNELVTGSSYESPPPDFR--GQWINLPVLQLTKDPLKTPGRLDHGTRTAFIHHREQVWKR 79

Query: 190 KNSLC-----------VMDRDGANIRYLTPSRDQILFEPRFSPN--QQKVAYATYDDEDI 236
             ++            + + +     ++  +    L   R++P+       + +   ED+
Sbjct: 80  CINIWRDVGLFGVLNEIANSEEEVFEWVKTASGWALALCRWAPSLHGSLFPHLSLKSEDL 139

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           +  +   T       R+           +  +  +  +++  D    +   +  S     
Sbjct: 140 IAEFAQVTNWSSCCLRVF---------AWHPHTNKFAVALLDD---SVRVYNASSTIVPS 187

Query: 297 LTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQS-------NGSDQKRISQDKEAS 348
           L + L  N+ S ++ P S+ ++  + +     ++ +         +    + +S      
Sbjct: 188 LKHRLQRNVASLAWKPLSASVLAVACQS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTP 246

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                W+P G  +           +  +  +            +    WSP G  ++   
Sbjct: 247 VTSLAWAPSGGRLLSASPVDAAIRVWDVSTETCVPLPWFRGGGVTNLLWSPDGSKIL--- 303

Query: 409 KKDGDTGSKLYSIDLNGRN--ETLINTPAYASDPQWVG 444
                T S ++ +        E             W  
Sbjct: 304 ---ATTPSAVFRVWEAQMWTCERWPTLSGRCQTGCWSP 338


>gi|299769540|ref|YP_003731566.1| hypothetical protein AOLE_06500 [Acinetobacter sp. DR1]
 gi|298699628|gb|ADI90193.1| hypothetical protein AOLE_06500 [Acinetobacter sp. DR1]
          Length = 411

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/314 (13%), Positives = 94/314 (29%), Gaps = 49/314 (15%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVA---YA 229
           +SR  + +     G +     +  ++G  N+     S          S + + +    Y+
Sbjct: 107 DSRFAYTTNEENEGAVT---ALSIQNGKVNVLNTVDSHGGHPTHASISLDGKFLFVSNYS 163

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNF--------------RSMILAPRFSSNGKRALIS 275
            +D                  +++ N                    +  FS +GK     
Sbjct: 164 AFDKGRGGVAVFPILPNGHLGEKVQNIVFSEGSGHVKGRQDSGHAHSTTFSPDGKYLY-- 221

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINI------SAS---YSPDSSQIVFESDREGKE 326
                   +Y+     N ++ L      ++            +SP+       ++   + 
Sbjct: 222 ASDLGNDKVYTFHYNPNKSQPLQADNSRDVTFRHGSGPRHMVFSPNGKHAYVTAEM--RS 279

Query: 327 QLYVMQSNGSDQKRIS---------QDKEASYFDPVWSPQGDL-IAFTKFSGEKFAIGVM 376
           ++          K+++           +  S    + SP G   IA  + +  K  +  +
Sbjct: 280 EIVTFNVQDGHLKKVAELKLIHEDKTPEFKSASGIILSPNGKYVIAANRGADNKLLVFKI 339

Query: 377 KKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +++G   +  V  +N   P   ++  SG+ L  +          L+  D N      +  
Sbjct: 340 QQNGLLAKPEVYKANGIEPRAFSFDASGKYLYVTNVYSN--NISLFRFDANKGTLKPVGD 397

Query: 434 PAYASDPQWVGFMD 447
            A  S P  + F +
Sbjct: 398 AAKISTPTDIKFFN 411


>gi|262405613|ref|ZP_06082163.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|262356488|gb|EEZ05578.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
          Length = 784

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 46/341 (13%), Positives = 117/341 (34%), Gaps = 64/341 (18%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D     +++ K    +  ++   A  +S    +     + DF+ R L+        + 
Sbjct: 86  LFDT---PELLSKIAVYTKKAYSAAAPHLSFTFMKDNETIRLDFD-RGLYTYNIRTKVLK 141

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K     + +DG              +  ++SP+   + YA+ D  ++  V       D  
Sbjct: 142 KLDEKPIYKDG------------DPYWKKYSPDSLYMLYASKD--NLYFVGNPKKGQDTI 187

Query: 250 PKRIGNFRSMIL-----------------APRFSSNGKRALISVQKDEA--MDIYSVDLQ 290
           P ++                         +  +   G     +V++D     D++ ++  
Sbjct: 188 PVQLTTDGGPDYTFNREDEGKMEGRFGAESAHWLP-GTHRFYAVREDNRKVRDLWLINSL 246

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           S   E LT         +   D +Q           +L +   +  + K++  ++    +
Sbjct: 247 SKFPE-LTTYKA---ELAGDKDVTQ----------YELLLGDVDKREVKKVDINRWPDQY 292

Query: 351 DPVW--SPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVE-------DSNLQAPTWSP 399
             V   +  G  + F +++    +  I  +  +  Q R+++        D  +++ ++  
Sbjct: 293 IDVLYTTNDGKRLYFQRYNRSWNQSDICEVDVETGQVRVVIHEENKPYLDYQMRSVSFLK 352

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            G+ ++F  +++G     LY     G  +  +    + + P
Sbjct: 353 DGKEILFRSERNGWGHYYLYDT-ATGNLKNQVTDGTWVAGP 392



 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 16/154 (10%)

Query: 268 NGKRALISV--QKDEAMDIYSVDLQSNATERLT---NTLFINI---SASYSPDSSQIVFE 319
           +GKR       +     DI  VD+++     +    N  +++    S S+  D  +I+F 
Sbjct: 301 DGKRLYFQRYNRSWNQSDICEVDVETGQVRVVIHEENKPYLDYQMRSVSFLKDGKEILFR 360

Query: 320 SDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAF------TKFSGEKFA 372
           S+R G    Y+  +   + K +++     +         G    F             + 
Sbjct: 361 SERNGWGHYYLYDTATGNLKNQVTDGTWVAGPIAKIDTVGRKFYFYGYGREKSIDPYYYI 420

Query: 373 IGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLI 405
           +   K D  +  RLL  ++       SPS   ++
Sbjct: 421 LYEAKLDQLNAIRLLTPENASHEARISPSNHYIV 454



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/183 (12%), Positives = 59/183 (32%), Gaps = 27/183 (14%)

Query: 221 PNQQKVAYATYDDED------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            + +++ +  Y+          + V     R+    +        + +  F  +GK  L 
Sbjct: 300 NDGKRLYFQRYNRSWNQSDICEVDVETGQVRVVIHEENKPYLDYQMRSVSFLKDGKEILF 359

Query: 275 SVQKDEAMDIYSVDLQSNATE-RLTNTLF-------INISASYSPDSSQIVFE------S 320
             +++     Y  D  +   + ++T+  +       I+          +  F       S
Sbjct: 360 RSERNGWGHYYLYDTATGNLKNQVTDGTWVAGPIAKIDTV------GRKFYFYGYGREKS 413

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  LY  + +  +  R+   + AS+ +   SP    I  +  +  +  + V++   
Sbjct: 414 IDPYYYILYEAKLDQLNAIRLLTPENASH-EARISPSNHYIVDSYSTVSQEPVNVVRNSR 472

Query: 381 SQE 383
            + 
Sbjct: 473 GKV 475


>gi|237716843|ref|ZP_04547324.1| dipeptidyl peptidase IV [Bacteroides sp. D1]
 gi|229442826|gb|EEO48617.1| dipeptidyl peptidase IV [Bacteroides sp. D1]
          Length = 799

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 46/341 (13%), Positives = 117/341 (34%), Gaps = 64/341 (18%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D     +++ K    +  ++   A  +S    +     + DF+ R L+        + 
Sbjct: 101 LFDT---PELLSKIAVYTKKAYSAAAPHLSFTFMKDNETIRLDFD-RGLYTYNIRTKVLK 156

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K     + +DG              +  ++SP+   + YA+ D  ++  V       D  
Sbjct: 157 KLDEKPIYKDG------------DPYWKKYSPDSLYMLYASKD--NLYFVGNPKKGQDTI 202

Query: 250 PKRIGNFRSMIL-----------------APRFSSNGKRALISVQKDEA--MDIYSVDLQ 290
           P ++                         +  +   G     +V++D     D++ ++  
Sbjct: 203 PVQLTTDGGPDYTFNREDEGKMEGRFGAESAHWLP-GTHRFYAVREDNRKVRDLWLINSL 261

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           S   E LT         +   D +Q           +L +   +  + K++  ++    +
Sbjct: 262 SKFPE-LTTYKA---ELAGDKDVTQ----------YELLLGDVDKREVKKVDINRWPDQY 307

Query: 351 DPVW--SPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVE-------DSNLQAPTWSP 399
             V   +  G  + F +++    +  I  +  +  Q R+++        D  +++ ++  
Sbjct: 308 IDVLYTTNDGKRLYFQRYNRSWNQSDICEVDVETGQVRVVIHEENKPYLDYQMRSVSFLK 367

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            G+ ++F  +++G     LY     G  +  +    + + P
Sbjct: 368 DGKEILFRSERNGWGHYYLYDT-ATGNLKNQVTDGTWVAGP 407



 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 16/154 (10%)

Query: 268 NGKRALISV--QKDEAMDIYSVDLQSNATERLT---NTLFINI---SASYSPDSSQIVFE 319
           +GKR       +     DI  VD+++     +    N  +++    S S+  D  +I+F 
Sbjct: 316 DGKRLYFQRYNRSWNQSDICEVDVETGQVRVVIHEENKPYLDYQMRSVSFLKDGKEILFR 375

Query: 320 SDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAF------TKFSGEKFA 372
           S+R G    Y+  +   + K +++     +         G    F             + 
Sbjct: 376 SERNGWGHYYLYDTATGNLKNQVTDGTWVAGPIAKIDTVGRKFYFYGYGREKSIDPYYYI 435

Query: 373 IGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLI 405
           +   K D  +  RLL  ++       SPS   ++
Sbjct: 436 LYEAKLDQLNAIRLLTPENASHEARISPSNHYIV 469



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/183 (12%), Positives = 59/183 (32%), Gaps = 27/183 (14%)

Query: 221 PNQQKVAYATYDDED------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            + +++ +  Y+          + V     R+    +        + +  F  +GK  L 
Sbjct: 315 NDGKRLYFQRYNRSWNQSDICEVDVETGQVRVVIHEENKPYLDYQMRSVSFLKDGKEILF 374

Query: 275 SVQKDEAMDIYSVDLQSNATE-RLTNTLF-------INISASYSPDSSQIVFE------S 320
             +++     Y  D  +   + ++T+  +       I+          +  F       S
Sbjct: 375 RSERNGWGHYYLYDTATGNLKNQVTDGTWVAGPIAKIDTV------GRKFYFYGYGREKS 428

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  LY  + +  +  R+   + AS+ +   SP    I  +  +  +  + V++   
Sbjct: 429 IDPYYYILYEAKLDQLNAIRLLTPENASH-EARISPSNHYIVDSYSTVSQEPVNVVRNSR 487

Query: 381 SQE 383
            + 
Sbjct: 488 GKV 490


>gi|213963800|ref|ZP_03392049.1| hypothetical protein CAPSP0001_0390 [Capnocytophaga sputigena
           Capno]
 gi|213953576|gb|EEB64909.1| hypothetical protein CAPSP0001_0390 [Capnocytophaga sputigena
           Capno]
          Length = 363

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 55/157 (35%), Gaps = 21/157 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNAT-----ERLT-NTLFINISASYSPDSSQIV 317
           R S N K   +     +   +  ++ ++        + LT + L    +  ++ ++    
Sbjct: 140 RLSPNKKFIAVDSYYWDERGVLLLNTETGKLIADFTKGLTRDDLRAQSTPVWTQNNEMY- 198

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S  +G    +  +     +K ++ +          +PQG  +AF ++ G    + V  
Sbjct: 199 --SAIKGVLYRWKEEYGNKVEKVLNINNGKGANYVTVNPQGTRVAF-RYEG---HLWVQN 252

Query: 378 KDGSQERLLVEDSN--------LQAPTWSPSGRSLIF 406
            DGS    +                P +SP G+ + F
Sbjct: 253 IDGSDLHQVTTSKLTGSSKADGEYHPVFSPDGKYIAF 289



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 10/63 (15%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY------FDPVWSPQGDLI 361
           + +P  +++ F  +      L+V   +GSD  +++  K          + PV+SP G  I
Sbjct: 232 TVNPQGTRVAFRYE----GHLWVQNIDGSDLHQVTTSKLTGSSKADGEYHPVFSPDGKYI 287

Query: 362 AFT 364
           AF 
Sbjct: 288 AFV 290



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 15/125 (12%), Positives = 35/125 (28%), Gaps = 19/125 (15%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           +Y          +++ N  +   A     +  G R     +      ++  ++  +   +
Sbjct: 205 LYRWKEEYGNKVEKVLNINNGKGANYVTVNPQGTRVAFRYEG----HLWVQNIDGSDLHQ 260

Query: 297 LTNTL-------FINISASYSPDSSQIVF----ESDREGKEQLYVMQSNGSDQKRISQDK 345
           +T +               +SPD   I F       R   +   +  S G     ++   
Sbjct: 261 VTTSKLTGSSKADGEYHPVFSPDGKYIAFVGAPTVGRAWTDYDPLQPSQGGVV--VTSGG 318

Query: 346 EASYF 350
               F
Sbjct: 319 YGYVF 323



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 19/147 (12%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L + +  K I       +    R  +  +     +  +  KG     +L+  +      +
Sbjct: 162 LLNTETGKLIADFTKGLTRDDLRAQSTPVWTQNNEMYSAIKG-----VLYRWKEEYGNKV 216

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + +  GAN   +              P   +VA+       +  +   D      
Sbjct: 217 EKVLNINNGKGANYVTVN-------------PQGTRVAFRYEGHLWVQNIDGSDLHQVTT 263

Query: 250 PKRIGNFRSM-ILAPRFSSNGKRALIS 275
            K  G+ ++     P FS +GK     
Sbjct: 264 SKLTGSSKADGEYHPVFSPDGKYIAFV 290


>gi|189467717|ref|ZP_03016502.1| hypothetical protein BACINT_04109 [Bacteroides intestinalis DSM
           17393]
 gi|189435981|gb|EDV04966.1| hypothetical protein BACINT_04109 [Bacteroides intestinalis DSM
           17393]
          Length = 364

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 58/197 (29%), Gaps = 16/197 (8%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                +    +  +  +  +       P         +    FS +GK    +    + +
Sbjct: 130 GSMSIFPLKKNGSLEPIDTLFEGSTGGPDAERQATPHVHCTVFSPDGKYIFATDFSADRI 189

Query: 283 DIYSVDLQSNATERLTNTLFINISA-------SYSPDSSQIVFESDREGK-EQLYVMQSN 334
             + +  +S       +   I++         ++SP+       S+  G       +   
Sbjct: 190 LRFVIHPKSIIPHP--SAEAIDVDPNSGPRHLTFSPNGKYAYLISELSGNITAFSYLDGK 247

Query: 335 GSDQKRISQDKEASYFDPVW--SPQGDLI-AFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
               + I+ D   +        SP G  + A  +  G+  AI  +  +      +     
Sbjct: 248 LEKIQTIAADTLRARGSADIHLSPDGKYLYASNRLKGDGLAIFEVNPETGMLAKVGYQLT 307

Query: 392 LQAPT---WSPSGRSLI 405
              P     +P+G+ L+
Sbjct: 308 GIHPRNFIITPNGKYLL 324



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 57/191 (29%), Gaps = 17/191 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALIS 275
           FSP+ + +    +  + ILR  +    I   P            PR   FS NGK A + 
Sbjct: 172 FSPDGKYIFATDFSADRILRFVIHPKSIIPHPSAEAIDVDPNSGPRHLTFSPNGKYAYLI 231

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINI-------SASYSPDSSQIVFESDR--EGKE 326
            +    +  +S  L     +    T+  +            SPD   + + S+R      
Sbjct: 232 SELSGNITAFSY-LDGKLEK--IQTIAADTLRARGSADIHLSPDGKYL-YASNRLKGDGL 287

Query: 327 QLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            ++ +        ++       +  + + +P G  +           +            
Sbjct: 288 AIFEVNPETGMLAKVGYQLTGIHPRNFIITPNGKYLLAACRDSHVIQVFQRDPVTGLLSD 347

Query: 386 LVEDSNLQAPT 396
             +D  +  P 
Sbjct: 348 THQDIRIDKPV 358


>gi|227538365|ref|ZP_03968414.1| peptidase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241880|gb|EEI91895.1| peptidase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 629

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 64/144 (44%), Gaps = 9/144 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREG 324
           S +GK+      ++   +I+ ++L+    +++LT    +N+   +  +  +IV+ + +  
Sbjct: 46  SPDGKQIAYLGLENHCKNIFILNLEDKSKSKQLTYQADMNVQYFFWANKDKIVYSNTQSP 105

Query: 325 KE--QLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKD 379
           ++  +L+ +  +      + +   +   + +P+      L+ A  +     F I  +  D
Sbjct: 106 EDSLRLFAIDVHTEAAVPLFKPLKRRLRWVNPIVLKDNSLLAAINERDSSVFDIYRVFLD 165

Query: 380 GSQERLLVEDSNLQAPTW--SPSG 401
           G  ++LL ++      +W  SP G
Sbjct: 166 GRPKQLLDKNPGNVI-SWYGSPDG 188



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 50/146 (34%), Gaps = 12/146 (8%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +   SPD  QI +       + ++++   + S  K+++   + +     W+   D I +
Sbjct: 41  TNFKISPDGKQIAYLGLENHCKNIFILNLEDKSKSKQLTYQADMNVQYFFWA-NKDKIVY 99

Query: 364 TKFSG--EKFAIGVMKKDGSQERLLVED----SNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           +      +   +  +         L +          P        L    ++D  +   
Sbjct: 100 SNTQSPEDSLRLFAIDVHTEAAVPLFKPLKRRLRWVNPIVLKDNSLLAAINERD-SSVFD 158

Query: 418 LYSIDLNGRNETLIN-TPAYASDPQW 442
           +Y + L+GR + L++  P       W
Sbjct: 159 IYRVFLDGRPKQLLDKNPGNVI--SW 182



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 76/180 (42%), Gaps = 9/180 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-- 275
           + SP+ +++AY   ++     +++++       K++     M +   F +N  + + S  
Sbjct: 44  KISPDGKQIAYLGLEN-HCKNIFILNLEDKSKSKQLTYQADMNVQYFFWANKDKIVYSNT 102

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGK-EQLYVM 331
              ++++ ++++D+ + A   L   L      ++     D+S +   ++R+     +Y +
Sbjct: 103 QSPEDSLRLFAIDVHTEAAVPLFKPLKRRLRWVNPIVLKDNSLLAAINERDSSVFDIYRV 162

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             +G   K++      +      SP G+  +A T  S E+  +    +    + ++  D 
Sbjct: 163 FLDGR-PKQLLDKNPGNVISWYGSPDGEVRLALTSDSVEESILYRPNQKTPFKEIVTNDF 221


>gi|196006980|ref|XP_002113356.1| hypothetical protein TRIADDRAFT_26455 [Trichoplax adhaerens]
 gi|190583760|gb|EDV23830.1| hypothetical protein TRIADDRAFT_26455 [Trichoplax adhaerens]
          Length = 212

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 59/181 (32%), Gaps = 15/181 (8%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y+       D ++    V  +  S      L   +     +R      D +    RF PN
Sbjct: 43  YRGHVYPVWDVDTSKFLVYFATASADTTARLWSTEFT-HPLRIFAGHLDSVNCV-RFHPN 100

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              +A  + D        L D +  +  +     +  ++A  FS NG     +   +   
Sbjct: 101 CNYIATGSADK----TCRLWDIQNGQTVRLFTGHKGDVMAMAFSPNGNYLATAGTDN--- 153

Query: 283 DIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKR 340
            IY  D+ +    +  +       S S+SP  +QI       G E  + +   NG    R
Sbjct: 154 SIYLWDISTGKLIQEYSGHTSPVYSISFSPCGTQIA----SGGFENCIKIWDVNGPIHGR 209

Query: 341 I 341
            
Sbjct: 210 F 210



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 50/162 (30%), Gaps = 13/162 (8%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDR 322
            FS +      +  +D  + ++     +   + L      ++   +  D+S+  V+ +  
Sbjct: 12  SFSDDASYL-FTASEDATVKLW----NTEDLKCLVTYRG-HVYPVWDVDTSKFLVYFATA 65

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                  +  +  +   RI      S     + P  + IA            +    G  
Sbjct: 66  SADTTARLWSTEFTHPLRIFAGHLDSVNCVRFHPNCNYIATGSADKTCRLWDIQN--GQT 123

Query: 383 ERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            RL      ++ A  +SP+G  L        D    L+ I  
Sbjct: 124 VRLFTGHKGDVMAMAFSPNGNYLA---TAGTDNSIYLWDIST 162


>gi|30584071|gb|AAP36284.1| Homo sapiens achalasia, adrenocortical insufficiency, alacrimia
           (Allgrove, triple-A) [synthetic construct]
 gi|61372196|gb|AAX43799.1| achalasia [synthetic construct]
 gi|61372199|gb|AAX43800.1| achalasia [synthetic construct]
          Length = 547

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  DD     V + +      P      +  + +  +       L    
Sbjct: 158 AWHPHTNKFAVALLDD----SVRVYNASSTIVPSLKHRLQRNVASLAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIR 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  I  T  S   F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKILATTPS-AVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGSRLLFT 346


>gi|19115040|ref|NP_594128.1| DNA polymerase alpha accessory factor Mcl1 [Schizosaccharomyces
           pombe 972h-]
 gi|30913116|sp|Q9C107|MCL1_SCHPO RecName: Full=Minichromosome loss protein 1; AltName: Full=DNA
           polymerase alpha accessory factor Mcl1
 gi|13624757|emb|CAC36919.1| DNA polymerase alpha accessory factor Mcl1 [Schizosaccharomyces
           pombe]
          Length = 815

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/247 (16%), Positives = 81/247 (32%), Gaps = 23/247 (9%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + I        +     ++CV   D      L       + +  +S +   +A A+    
Sbjct: 59  TGIAVAENYFCTCSEDATVCVYPIDSPTEHTLLARTTLPIRDVAYSVDGNWIAIAS---- 114

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D   V ++ +        +   ++      +S NG    +S        +Y  D Q+   
Sbjct: 115 DETAVKVVSSTDSSQIFSLRPAKASNKHVTYSPNGNFLAVSSC---NGILYFYDTQTREL 171

Query: 295 ER-LTNTLF-------INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--KRISQD 344
            + LTNT+        I   A++ P +      S       + V+  +      K + ++
Sbjct: 172 IKFLTNTIASLEAESEICSKAAWHPKNGTFAVAST---DHFVSVISPDDWLPLYKLLPKE 228

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             +   D  WS  G  IA +   G    I +      +  + +  S + A  W P    L
Sbjct: 229 NHSGVTDISWSSNGMYIAASFKKGG---ILIWDTQSHEVVVELPYSTVVALAWQPFENVL 285

Query: 405 IFSRKKD 411
            F+  + 
Sbjct: 286 SFTTNQG 292


>gi|301768100|ref|XP_002919471.1| PREDICTED: WD repeat-containing protein 8-like [Ailuropoda
           melanoleuca]
          Length = 467

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 83/228 (36%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D +   I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVIRDVNTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYKRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             RI    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --RIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACQQGITF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + V   +     R    +        W+P G ++A    +  
Sbjct: 142 TRDGRYMALAERRDCKDHVSVFVCSDWQLLRHFDTETQDLAGIEWAPNGCVLA-VWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKD 411
           ++ + +   DG   RLL           +++  WSPS + L       
Sbjct: 201 EYKVLLYSLDG---RLLSAYCAYEWSLGVKSVAWSPSSQFLAVGSYDG 245



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 50/148 (33%), Gaps = 9/148 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK     VQ      +   D+ +    +L   L       +S DS  I+    + G
Sbjct: 16  FSPDGKYLASCVQ----YRLVIRDVNTLQILQLYTCLDQIQHIEWSADSLFILCAMYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++      +    +  A      WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQPEWHCR--IDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSVS 127

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKD 411
            +       Q  T++  GR +  + ++D
Sbjct: 128 YIKYPKACQQGITFTRDGRYMALAERRD 155


>gi|298383864|ref|ZP_06993425.1| dipeptidyl-peptidase IV [Bacteroides sp. 1_1_14]
 gi|298263468|gb|EFI06331.1| dipeptidyl-peptidase IV [Bacteroides sp. 1_1_14]
          Length = 736

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 29/154 (18%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-------- 361
           + D +QI+  S R G++   +   N     +  +    ++    +SP GD +        
Sbjct: 56  NADGTQIIKYSFRTGEKVEVIFDVN-----QARECDFKNFDSYQFSPDGDKLLIATKTTP 110

Query: 362 AFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +         I  +K++            L +    Q P +SP G  + F R  +    
Sbjct: 111 IYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQVPVFSPDGTMIAFVRDNNIFLV 170

Query: 416 SKLY-----SIDLNGRNETLINTPAYASDPQWVG 444
             LY      +  +G+  T++N       P WV 
Sbjct: 171 KLLYGNSESQVTEDGKQNTVLN-----GIPDWVY 199



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 78/250 (31%), Gaps = 54/250 (21%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F     ++ +  I  PD       +  + A      +      +++ V   
Sbjct: 26  DLKDITSGRFRP---ENIQGVIPTPDGEH----YTQMNADGTQIIKYSFRTGEKVEV--- 75

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             ++  +    
Sbjct: 76  IFDVNQARECDFKNFDSYQFSPDGDKLLIATKTTPIYRHSYT-----AVHYIYPLKRNDK 130

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   +A+   ++     ++L+    
Sbjct: 131 GVTTNNIIERLSDGGPQQV-----------PVFSPDGTMIAFVRDNN-----IFLVKLLY 174

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +  ++                          A  FS++          +  +  YS  
Sbjct: 175 GNSESQVTEDGKQNTVLNGIPDWVYEEEFGFNRALEFSADNTMIAFIRFDESEVPSYSFP 234

Query: 289 LQSNATERLT 298
           + +    ++T
Sbjct: 235 MFAGEAPQIT 244



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 49/159 (30%), Gaps = 34/159 (21%)

Query: 219 FSPNQQKVA------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           FSP+  K+             Y        L+        +   +R+ +     + P FS
Sbjct: 95  FSPDGDKLLIATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQV-PVFS 153

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------------------FINISAS 308
            +G        +D  + +  + L  N+  ++T                       N +  
Sbjct: 154 PDGTMIAFV--RDNNIFLVKL-LYGNSESQVTEDGKQNTVLNGIPDWVYEEEFGFNRALE 210

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +S D++ I F    E +   Y       +  +I+  K+ 
Sbjct: 211 FSADNTMIAFIRFDESEVPSYSFPMFAGEAPQITPLKDY 249


>gi|281351884|gb|EFB27468.1| hypothetical protein PANDA_008098 [Ailuropoda melanoleuca]
          Length = 437

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 83/228 (36%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D +   I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 5   QYRLVIRDVNTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYKRGLVQVWSLEQPEWHC 62

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             RI    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 63  --RIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACQQGITF 118

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + V   +     R    +        W+P G ++A    +  
Sbjct: 119 TRDGRYMALAERRDCKDHVSVFVCSDWQLLRHFDTETQDLAGIEWAPNGCVLA-VWDTCL 177

Query: 370 KFAIGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKD 411
           ++ + +   DG   RLL           +++  WSPS + L       
Sbjct: 178 EYKVLLYSLDG---RLLSAYCAYEWSLGVKSVAWSPSSQFLAVGSYDG 222


>gi|240139595|ref|YP_002964071.1| Cytochrome c, class I [Methylobacterium extorquens AM1]
 gi|240009568|gb|ACS40794.1| Cytochrome c, class I [Methylobacterium extorquens AM1]
          Length = 438

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 74/237 (31%), Gaps = 20/237 (8%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G  N+          S      + +     A    +       +     SP+   +A A 
Sbjct: 72  GAVNAVAALPDGRFASASEDGRIALWRLGQAEPDCVLAGHAGPVAGLAVSPDGTMLASAA 131

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +D     R++ +        + +   +  + A  F  +G+  L++   D ++ I++    
Sbjct: 132 WD--GTARIWPL---AGGPARTLEGHKGNVNAVAFLPDGR--LVTAGADASVRIWTP--- 181

Query: 291 SNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                 LT TL   +SA + + D           G +      ++    +   +   A  
Sbjct: 182 -QGETVLTATLPSALSALAVTTDGEIAA-----AGADATVRFLASDGQVRSEVELGPAPV 235

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
                +P G  IA     G    I   +  G     LV     + +  W P G  L+
Sbjct: 236 IALAPAPDGTRIAAASAGGTVAMIE--RASGKILFTLVGPGLPVWSVAWRPDGSELV 290


>gi|212544830|ref|XP_002152569.1| eukaryotic translation initiation factor subunit eIF2A, putative
           [Penicillium marneffei ATCC 18224]
 gi|210065538|gb|EEA19632.1| eukaryotic translation initiation factor subunit eIF2A, putative
           [Penicillium marneffei ATCC 18224]
          Length = 687

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 61/186 (32%), Gaps = 17/186 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V  S  S   + +L ++   GA    +   R+  + +  +SPN ++             +
Sbjct: 246 VDRSGKSYYGETTLYLLSATGAFDSRIDLDREGPIHDVTWSPNSKEFGVVYGFMPAKTTI 305

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  LAPR    FS +G+  +++   + A  +   DL+    +
Sbjct: 306 FNF---------RGVATHSYPLAPRNTIVFSPHGRFVVVAGFGNLAGQMDIYDLEKGHQK 356

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             T          +SPD   I     S R   +    +       +    +     +   
Sbjct: 357 ITTIEGSNATVCEWSPDGKHILTATTSPRLRVDNGVRIWHVTGALQ--YNEDMNELYQVC 414

Query: 354 WSPQGD 359
           W PQG 
Sbjct: 415 WRPQGQ 420



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 69/211 (32%), Gaps = 21/211 (9%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKD------ 279
            +          V +        P  +   F+   +  +++++G   ++  Q D      
Sbjct: 192 VFTPERKGQPASVKVFVVPQFNTPVSQKTFFKGDKVQLKWNNSGTSIIVLAQTDVDRSGK 251

Query: 280 ---EAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSN 334
                  +Y +        R+  +        ++SP+S +  V       K  ++  +  
Sbjct: 252 SYYGETTLYLLSATGAFDSRIDLDREGPIHDVTWSPNSKEFGVVYGFMPAKTTIFNFRGV 311

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQ 393
            +    +     A     V+SP G  +    F      + +   +   +++   E SN  
Sbjct: 312 ATHSYPL-----APRNTIVFSPHGRFVVVAGFGNLAGQMDIYDLEKGHQKITTIEGSNAT 366

Query: 394 APTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
              WSP G+ ++ +        D G +++ +
Sbjct: 367 VCEWSPDGKHILTATTSPRLRVDNGVRIWHV 397


>gi|115376424|ref|ZP_01463660.1| dipeptidyl peptidase IV [Stigmatella aurantiaca DW4/3-1]
 gi|310823227|ref|YP_003955585.1| peptidase, s9b (dipeptidyl peptidase iv) subfamily [Stigmatella
           aurantiaca DW4/3-1]
 gi|115366556|gb|EAU65555.1| dipeptidyl peptidase IV [Stigmatella aurantiaca DW4/3-1]
 gi|309396299|gb|ADO73758.1| Peptidase, S9B (Dipeptidyl peptidase IV) subfamily [Stigmatella
           aurantiaca DW4/3-1]
          Length = 720

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 87/262 (33%), Gaps = 42/262 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--------------SMILAP 263
            +SP+ + +AYA  D   + ++ L+D        +   +                +   P
Sbjct: 209 WWSPDAKHIAYAEADTSGVEKLNLVDPASPEQDAQPFAYPRPGKPNAKVRLFVVPVAGGP 268

Query: 264 -----------------RFSSNGK-RALISVQKDEAMDIYSVDLQSNATERLTNTLF--- 302
                            R+S  G    L+  +      + + D ++  T  L        
Sbjct: 269 AKEVRWDAEKYPYMATVRWSKGGPLTLLVQNRAQTEEVLLAADPRTGQTRPLLVERDDAW 328

Query: 303 ---INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                    +  D S  ++ ++R G  ++ + +++GS  + + +          + P+ D
Sbjct: 329 LSLNQDFPEWLEDGSGFLWSTERNGASEVELRRADGSLARSLVKPGSGFQMLVNYLPKED 388

Query: 360 LIAFTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           ++ F    +  +  +  +K  G  ER+      L+    S  G  L+    +      + 
Sbjct: 389 VLYFLGGPNPTERYLWRVKGGGEPERVTSGGPALEGAAVSGRGG-LMVITTEGPTRLRRA 447

Query: 419 YSIDLNGRNETLINTPAYASDP 440
           Y    +G    L   P+ A +P
Sbjct: 448 YVHRSDGT--RLGELPSVAREP 467



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/151 (13%), Positives = 41/151 (27%), Gaps = 36/151 (23%)

Query: 311 PDSSQIVF--ESDREGKEQLYVMQSNGSDQKRISQD------------------------ 344
           PD   ++F   S   G   L+         + +                           
Sbjct: 45  PDEETVLFLRGSPASGVSSLFAFDVATGGTRELLTPERVIAGAEETLSPQKRARRERMRA 104

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
              S+     S  G  +  T        +  +++   +   L     +  P +SP G+ +
Sbjct: 105 SGGSFTSYALSRDGQKVLLTLSG----KLYAVERGSGKVTQLNAGEGVIDPQFSPDGKQV 160

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            + R  D      ++ ++L    E  I    
Sbjct: 161 AYVRDND------VFRVELATNKERQITRGG 185


>gi|17552164|ref|NP_497749.1| Temporarily Assigned Gene name family member (tag-125)
           [Caenorhabditis elegans]
 gi|3123159|sp|Q17963|TG125_CAEEL RecName: Full=WD repeat-containing protein tag-125
 gi|3874290|emb|CAA85487.1| C. elegans protein C14B1.4, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 376

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 91/264 (34%), Gaps = 21/264 (7%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             K   +++     + + +     ++ + + D              + +  +S + + V 
Sbjct: 86  HTKSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVV 145

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            A+ D      + + +    R  K +    + +    F+      ++S   DE++ I+  
Sbjct: 146 SASDDK----TLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQ-SSLVVSGSFDESVRIW-- 198

Query: 288 DLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D+++    + L        + S++ D S I   S  +G  +++   +NG   K +  D+ 
Sbjct: 199 DVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSY-DGLVRIWDT-ANGQCIKTLVDDEN 256

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS----GR 402
                  +SP G  I           +    K G   +      N +   ++      G+
Sbjct: 257 PPVAFVKFSPNGKYIL-ASNLDSTLKLWDFSK-GKTLKQYTGHENSKYCIFANFSVTGGK 314

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGR 426
            +I      G    K+Y  +L  R
Sbjct: 315 WII-----SGSEDCKIYIWNLQTR 333



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 83/220 (37%), Gaps = 18/220 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +   +FSP  + +  ++ D      V + +       + +   +  +    +
Sbjct: 82  TLEGHTKSISSAKFSPCGKYLGTSSADK----TVKIWNMDHMICERTLTGHKLGVNDIAW 137

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           SS+  R ++S   D+ + I+ + + S  T+ L          +++P SS +V  S     
Sbjct: 138 SSD-SRCVVSASDDKTLKIFEI-VTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSF---D 192

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ER 384
           E + +         +             ++  G LIA   + G    + +      Q  +
Sbjct: 193 ESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDG---LVRIWDTANGQCIK 249

Query: 385 LLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            LV+D N  +    +SP+G+ ++ S   + D+  KL+   
Sbjct: 250 TLVDDENPPVAFVKFSPNGKYILAS---NLDSTLKLWDFS 286


>gi|330798727|ref|XP_003287402.1| hypothetical protein DICPUDRAFT_87573 [Dictyostelium purpureum]
 gi|325082607|gb|EGC36084.1| hypothetical protein DICPUDRAFT_87573 [Dictyostelium purpureum]
          Length = 1037

 Score = 53.1 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 81/228 (35%), Gaps = 33/228 (14%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIG---- 254
            ++++ S   I +     P+  ++A    D +     +  + L +   D    ++     
Sbjct: 6   PQWISHSGLSI-YSIDVHPDGTRLATGGGDAKIKIWSVAPISLSEVENDENTPKLLCSIE 64

Query: 255 -NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER----------LTNTLFI 303
            +    + + ++S +GK    S   D+   I+ +  +SN  +           L      
Sbjct: 65  NSHFQTVNSVKWSKDGKYLA-SSSDDKLCMIWGLS-KSNYMKSSVENWVCVATLRAHSGD 122

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               S+SPD+  +   S     + + + +++        ++ +       W P G  +A 
Sbjct: 123 ISEVSWSPDNKYLATCSF---DKTIIIWETSKFAMVTKLEEHKGFVKGLTWDPLGRYLA- 178

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRSLI 405
              S +K  I     D   E ++ E            P+W+P G+ ++
Sbjct: 179 -SQSEDKSLIVWRTSDWVIETVITEPFQHNGNSFFLRPSWTPDGQFIV 225



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/181 (13%), Positives = 54/181 (29%), Gaps = 14/181 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDE------DILRVYLMDTRIDRAPKRIGNFRS 258
            +  S  Q +   ++S + + +A ++ D                          +     
Sbjct: 62  SIENSHFQTVNSVKWSKDGKYLASSSDDKLCMIWGLSKSNYMKSSVENWVCVATLRAHSG 121

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            I    +S + K    +   D+ + I+    +     +L          ++ P    +  
Sbjct: 122 DISEVSWSPDNKYLA-TCSFDKTIIIWETS-KFAMVTKLEEHKGFVKGLTWDPLGRYLA- 178

Query: 319 ESDREGKEQLYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            S  E K  +    S+   +  I+     +  + +  P W+P G  I  T         G
Sbjct: 179 -SQSEDKSLIVWRTSDWVIETVITEPFQHNGNSFFLRPSWTPDGQFIVATHGINNATHTG 237

Query: 375 V 375
           V
Sbjct: 238 V 238


>gi|299744113|ref|XP_002910750.1| vegetative incompatibility protein HET-E-1 [Coprinopsis cinerea
            okayama7#130]
 gi|298405970|gb|EFI27256.1| vegetative incompatibility protein HET-E-1 [Coprinopsis cinerea
            okayama7#130]
          Length = 1273

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 56/361 (15%), Positives = 105/361 (29%), Gaps = 70/361 (19%)

Query: 114  GRVIKEGKDRLRVEF---RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
            G ++  G D   +     +  +  D   +    +  +   WR       D     +    
Sbjct: 927  GTLLASGSDDNTISLWNPQTREALDGTLLASGSWDDTIRLWRPQTGEALDGTL--LASGS 984

Query: 171  GDFNSRILFVSESVV-------SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPN 222
             D+  RI  +            SG   N++C+ + + G  +          +    FSP+
Sbjct: 985  IDWTIRIWSLRTGEALDGTLLASGSGDNTICLWNPQTGEALGKPLQGHSSYVTSVAFSPD 1044

Query: 223  QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPR---------------- 264
               +A  ++D    L        +D      G++   I   +P+                
Sbjct: 1045 GTLLASGSWDRRICLWSPKTGEALDGTLLASGSWDRRICLWSPQTDGTLLASGSWDRRIC 1104

Query: 265  -FSS------NGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQ 315
             +S       +G     S   D  + ++  + Q+     E L        S ++SPD S 
Sbjct: 1105 LWSPETGEALDGTLLA-SGLVDGTICLW--NPQTGEALGEPLRGHSSYVTSVAFSPDGSL 1161

Query: 316  IVFESDREGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSP------QGDLIAFTKFS 367
            +      +G   + +      +     +       +   +WSP       G L+A     
Sbjct: 1162 LA-SGLVDGT--ICLWNPQTGEALDGTLLASGSIDWTIRMWSPRTGEALDGTLLASGSGD 1218

Query: 368  GEKFAIGVMKKDGSQE---RLLVEDS-NLQAPTWSP------SGRSLIFSRKKDGDTGSK 417
                 I +      +     LL   S +     WSP       G  L       GD   +
Sbjct: 1219 NT---IRLWNPQTGEALDGNLLASGSIDWTIQMWSPQTGEALDGTLLA---SGSGDNTIR 1272

Query: 418  L 418
            L
Sbjct: 1273 L 1273


>gi|291300600|ref|YP_003511878.1| WD-40 repeat protein [Stackebrandtia nassauensis DSM 44728]
 gi|290569820|gb|ADD42785.1| WD-40 repeat protein [Stackebrandtia nassauensis DSM 44728]
          Length = 816

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/194 (11%), Positives = 56/194 (28%), Gaps = 15/194 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP----RFSPNQQKVAYATYDDEDI 236
           S + ++      + V D                  EP     ++    ++A        +
Sbjct: 616 SATGLATATGTEILVWDPATGECSRTWRFSSGPEGEPLRALVWNHAGDRLA----AGGSL 671

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATE 295
             + +  T  D     +      +    FS +G   + S      + I+ + D      +
Sbjct: 672 GTIKVWRTGEDSPSTVLNCAPVGVRTLAFSPDGDWLV-SGDAAGGLRIWRLSDSSDQHLK 730

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +         + ++SPD   I          ++ +  +    + R+ +    +     WS
Sbjct: 731 Q--AHEAAVQTVAWSPDGKLIA---SGGIDSRVRLWDAGSGREHRVGEGHTGTVNTLCWS 785

Query: 356 PQGDLIAFTKFSGE 369
             G+ +      G 
Sbjct: 786 TDGNRVISGSSDGT 799



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 40/100 (40%), Gaps = 8/100 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD   +V   D  G  +++ +    S  + + Q  EA+     WSP G LIA     
Sbjct: 699 AFSPDGDWLV-SGDAAGGLRIWRLS--DSSDQHLKQAHEAAVQTVAWSPDGKLIA---SG 752

Query: 368 GEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
           G    + +      +E  + E     +    WS  G  +I
Sbjct: 753 GIDSRVRLWDAGSGREHRVGEGHTGTVNTLCWSTDGNRVI 792



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 29/249 (11%), Positives = 71/249 (28%), Gaps = 24/249 (9%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              +S+ V    G     +    D  +   R+S     +        + + ++  +    
Sbjct: 541 ARPDSVTVSTVSGTAPSVVLRDHDGPVVGVRWSTEAPGLL--AVGSGNTVTLWRDNDNAF 598

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINIS 306
            + + I      +    +S+ G      +      +I   D  +    R    +      
Sbjct: 599 ASTRTIA-CPDEVKQLSWSATG------LATATGTEILVWDPATGECSRTWRFSSGPEGE 651

Query: 307 A----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 ++    ++           + V ++       +            +SP GD + 
Sbjct: 652 PLRALVWNHAGDRLAAG---GSLGTIKVWRTGEDSPSTVLNCAPVGVRTLAFSPDGDWLV 708

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +  +     I  +     Q      ++ +Q   WSP G+ +       G   S++   D
Sbjct: 709 -SGDAAGGLRIWRLSDSSDQHLKQAHEAAVQTVAWSPDGKLIA-----SGGIDSRVRLWD 762

Query: 423 L-NGRNETL 430
             +GR   +
Sbjct: 763 AGSGREHRV 771


>gi|295659096|ref|XP_002790107.1| minichromosome loss protein [Paracoccidioides brasiliensis Pb01]
 gi|226282009|gb|EEH37575.1| minichromosome loss protein [Paracoccidioides brasiliensis Pb01]
          Length = 893

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 80/249 (32%), Gaps = 23/249 (9%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   +   F+       + +  L     D   +R   P RD  L     S +   VA A+
Sbjct: 106 GIVATNDSFIMGGEDGTVWRYELETGQMDKLLVRCALPVRDLSL-----SKDGDWVAVAS 160

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D    L V +++       K +      +    F  +G+   +S   D  + +YSVD  
Sbjct: 161 DD----LVVKIVNIHDMTIVKYLREQSKGVKHVTFDPSGRFIAVSGS-DGIIYVYSVDGP 215

Query: 291 --------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                        RL         A + P+     F +    ++   V  S+ + Q    
Sbjct: 216 QPELVKRIDGIIGRLETDNEATTRAVWHPEGR--AFVAVEPTRDIAIVAASDWTKQNVFP 273

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
               A      WSP G L+A    +G    I + +    +     +  N+    W P   
Sbjct: 274 AGHNADITALAWSPNGALLA---SAGADRQIVLWETKTQKILRRYDIPNVINLAWHPVDN 330

Query: 403 SLIFSRKKD 411
           +L F+    
Sbjct: 331 TLSFTTSDG 339


>gi|84370141|ref|NP_001033649.1| POC1 centriolar protein homolog A [Bos taurus]
 gi|91207985|sp|Q2TBP4|POC1A_BOVIN RecName: Full=POC1 centriolar protein homolog A; AltName: Full=WD
           repeat-containing protein 51A
 gi|83638685|gb|AAI09863.1| WD repeat domain 51A [Bos taurus]
 gi|296474830|gb|DAA16945.1| WD repeat-containing protein 51A [Bos taurus]
          Length = 407

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 45/261 (17%), Positives = 91/261 (34%), Gaps = 20/261 (7%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           AH   D   +       D  + + F   ++ + SG + + L V         Y       
Sbjct: 3   AHCPEDPSLERHFKGHRDAVTSVDFSLNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKD 62

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +    FSP+   +A  + D    +R+++ + + +    R     + + +  F S+G+  
Sbjct: 63  AVTCVNFSPSGHLLASGSRD--KTVRIWVPNVKGESTVFR--AHTATVRSVHFCSDGQS- 117

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            ++   D+ + ++S   Q      L+  +     A +SPD   IV  SD    + + +  
Sbjct: 118 FVTASDDKTVKVWSTHRQ-KFLFSLSQHINWVRCAKFSPDGRLIVSASD---DKTVKLWD 173

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VE 388
               +      +         + P G  IA            V        RLL    + 
Sbjct: 174 KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDV-----RTHRLLQHYQLH 228

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
            + + A ++ PSG  L+ +  
Sbjct: 229 SAAVNALSFHPSGNYLVTASS 249



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 75/263 (28%), Gaps = 33/263 (12%)

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
             ++R   H   D +        G            + SG    ++ +   +      + 
Sbjct: 52  TRAYRFAGHK--DAVTCVNFSPSG----------HLLASGSRDKTVRIWVPNVKGESTVF 99

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +    +    F  + Q    A+ D      V +  T   +    +    + +   +FS 
Sbjct: 100 RAHTATVRSVHFCSDGQSFVTASDDK----TVKVWSTHRQKFLFSLSQHINWVRCAKFSP 155

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +G R ++S   D+ + ++  D  S                  + P  + I          
Sbjct: 156 DG-RLIVSASDDKTVKLW--DKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM---DN 209

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + V         +  Q   A+     + P G+ +           + +M     + RLL
Sbjct: 210 TVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTASSDSTLKILDLM-----EGRLL 264

Query: 387 VEDSNLQAPTWSPSGRSLIFSRK 409
                 Q P       ++ FSR 
Sbjct: 265 YTLHGHQGPA-----TTVAFSRT 282


>gi|73985357|ref|XP_541857.2| PREDICTED: similar to WD repeat domain 51A isoform 1 [Canis
           familiaris]
          Length = 406

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 84/233 (36%), Gaps = 18/233 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 31  TKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRD--KTVRIW 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+  + +   D+ + ++S   Q      L+  
Sbjct: 89  IPNVKGESTVFR--AHTATVRSVHFCSDGQSLV-TASDDKTVKVWSTHRQ-KFLFSLSQH 144

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +      +      +         + P G  
Sbjct: 145 INWVRCARFSPDGRLIVSASD---DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTC 201

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
           IA            V        RLL    +  + + A ++ PSG  L+ +  
Sbjct: 202 IAAASMDNTVKVWDV-----RTHRLLQHYQLHSAAVNALSFHPSGNYLLTASS 249



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 77/261 (29%), Gaps = 33/261 (12%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           ++R   H   D +        G            + SG    ++ +   +      +  +
Sbjct: 54  AYRFAGHK--DAVTCVNFSPSG----------HLLASGSRDKTVRIWIPNVKGESTVFRA 101

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    F  + Q +  A+ D      V +  T   +    +    + +   RFS +G
Sbjct: 102 HTATVRSVHFCSDGQSLVTASDDK----TVKVWSTHRQKFLFSLSQHINWVRCARFSPDG 157

Query: 270 KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R ++S   D+ + ++  D  S                  + P  + I   S       +
Sbjct: 158 -RLIVSASDDKTVKLW--DKTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASM---DNTV 211

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V         +  Q   A+     + P G+ +           + +M     + RLL  
Sbjct: 212 KVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLM-----EGRLLYT 266

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
               Q P       ++ FSR 
Sbjct: 267 LHGHQGPA-----TTVAFSRT 282


>gi|325915603|ref|ZP_08177911.1| glutamyl peptidase [Xanthomonas vesicatoria ATCC 35937]
 gi|325538163|gb|EGD09851.1| glutamyl peptidase [Xanthomonas vesicatoria ATCC 35937]
          Length = 818

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 73/219 (33%), Gaps = 15/219 (6%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQ--KDEAMD 283
            YA        +++L+        +  G    + LA   +S + +      +     A +
Sbjct: 83  TYAASRFSFSSKLWLLAVADGSERQIAGLPSPLSLADLSWSPDQRYLAFRREDAASGANE 142

Query: 284 IYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKR 340
           ++ VD+ +   +RL   L   +N    + PD S ++ +    G+       +       +
Sbjct: 143 LWLVDVAAKQAKRLVAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPARDATPDGPAIQ 202

Query: 341 ISQDKEASYFDPVWSP----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +         P +      + D   F  ++  +  I  +     Q R +         +
Sbjct: 203 QTSAAAGVRSLPTYQDLLRNEADARVFEYYATGQPIIVTVS---GQVRPIAAPGIYLNLS 259

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            SP GR ++   ++     S L  +D   R   +++   
Sbjct: 260 VSPDGRYIL--SERSERPFSYLVPVDNFARRIEVLDLQG 296



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 86/253 (33%), Gaps = 26/253 (10%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRF 219
           DI +    E      RI   + +       + L ++   DG+  +         L +  +
Sbjct: 63  DIAEVAQPELKLAGVRIHPKTYAASRFSFSSKLWLLAVADGSERQIAGLPSPLSLADLSW 122

Query: 220 SPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALISVQ 277
           SP+Q+ +A+   D       ++L+D    +A + +     S+    R+  +G   L+  Q
Sbjct: 123 SPDQRYLAFRREDAASGANELWLVDVAAKQAKRLVAGLNTSVNDDLRWLPDGSGLLLQQQ 182

Query: 278 KDEAMDIYSVDL--QSNATERLTNTLFINISASYSP----DSSQIVFESDREGKEQLYVM 331
                   + D      A ++ +    +    +Y      ++   VFE    G+  +  +
Sbjct: 183 VAGQGAPPARDATPDGPAIQQTSAAAGVRSLPTYQDLLRNEADARVFEYYATGQPIIVTV 242

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIGVMKKDG 380
                  + I+      Y +   SP G  I  ++ S   F            I V+   G
Sbjct: 243 S---GQVRPIA--APGIYLNLSVSPDGRYIL-SERSERPFSYLVPVDNFARRIEVLDLQG 296

Query: 381 SQERLLVEDSNLQ 393
              R + +   ++
Sbjct: 297 KLVRQIAQLPLVE 309



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 12/133 (9%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFS--GE 369
           +S+  F S      +L+++      +++I+      S  D  WSP    +AF +      
Sbjct: 86  ASRFSFSS------KLWLLAVADGSERQIAGLPSPLSLADLSWSPDQRYLAFRREDAASG 139

Query: 370 KFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              + ++     Q + LV     S      W P G  L+  ++  G           +G 
Sbjct: 140 ANELWLVDVAAKQAKRLVAGLNTSVNDDLRWLPDGSGLLLQQQVAGQGAPPARDATPDGP 199

Query: 427 NETLINTPAYASD 439
                +  A    
Sbjct: 200 AIQQTSAAAGVRS 212



 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 7/85 (8%)

Query: 365 KFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            FS + + + V   DGS+ ++  L    +L   +WSP  R L F R+      ++L+ +D
Sbjct: 90  SFSSKLWLLAV--ADGSERQIAGLPSPLSLADLSWSPDQRYLAFRREDAASGANELWLVD 147

Query: 423 LNGRNETLINTPAYAS---DPQWVG 444
           +  +    +      S   D +W+ 
Sbjct: 148 VAAKQAKRLVAGLNTSVNDDLRWLP 172


>gi|238064199|ref|ZP_04608908.1| peptidase [Micromonospora sp. ATCC 39149]
 gi|237886010|gb|EEP74838.1| peptidase [Micromonospora sp. ATCC 39149]
          Length = 795

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 85/258 (32%), Gaps = 9/258 (3%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI--LRVYL 241
           V     +  + V DR+  + R +T      +      P    V +   D   +   RV  
Sbjct: 220 VGDADGRCQVFVWDREVGSARQVTDRAAGTVRA-AIDPGGTTVWWFDDDLTGVGSWRVCD 278

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +D          G   +       +++G  A+I +     M ++     +   +R++   
Sbjct: 279 IDHPEHSTEALPGLAPARHAGLAMAADGT-AVIGLSDTGGMTLFR-RTATGRVDRISRVS 336

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-- 359
                    P    +V  +D      + V+  +G+    +        +   ++P     
Sbjct: 337 GYAHLVDVDPAGQLLVVGTDAASPTAVTVLTGDGTPVAVLPGSATGRVWPLGFAPGTGPA 396

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +        ++A+    + G   R           +W P G  ++  + +    GS LY
Sbjct: 397 RLLLVVEENGEYALATWTRAGGLARHEWRFDTEITASWYPDGTRVLVRQDRH--AGSHLY 454

Query: 420 SIDLNGRNETLINTPAYA 437
            +DL+    T + TPA +
Sbjct: 455 CVDLSAGTRTEVPTPAGS 472



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 59/195 (30%), Gaps = 1/195 (0%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            D   +IG         +R+ A    D I +               +           ++
Sbjct: 304 ADGTAVIGLSDTGGMTLFRRTATGRVDRISRVSGYAHLVDVDPAGQLLVVGTDAASPTAV 363

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V+  DG  +  L  S    ++   F+P           +E+        TR     +  
Sbjct: 364 TVLTGDGTPVAVLPGSATGRVWPLGFAPGTGPARLLLVVEENGEYALATWTRAGGLARHE 423

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             F + I A  +  +G R L+   +     +Y VDL +     +       + A+  PD 
Sbjct: 424 WRFDTEITA-SWYPDGTRVLVRQDRHAGSHLYCVDLSAGTRTEVPTPAGSILDAAAWPDG 482

Query: 314 SQIVFESDREGKEQL 328
                 +D     Q+
Sbjct: 483 DVAYVWTDSTTPPQI 497



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 8/175 (4%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDREGKEQLY 329
           RA      D    ++  D +  +  ++T+     + A+  P  + +  F+ D  G     
Sbjct: 216 RAAFVGDADGRCQVFVWDREVGSARQVTDRAAGTVRAAIDPGGTTVWWFDDDLTGVGSWR 275

Query: 330 VMQSNGSD--QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           V   +  +   + +     A +     +  G  +     +G    +      G  +R+  
Sbjct: 276 VCDIDHPEHSTEALPGLAPARHAGLAMAADGTAVIGLSDTGG-MTLFRRTATGRVDRISR 334

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                      P+G+ L+        T   +    L G    +   P  A+   W
Sbjct: 335 VSGYAHLVDVDPAGQLLVVGTDAASPTAVTV----LTGDGTPVAVLPGSATGRVW 385



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 49/149 (32%), Gaps = 12/149 (8%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK---RALISVQ 277
           P  Q +     D      V ++           G+    +    F+  G    R L+ V+
Sbjct: 346 PAGQLLV-VGTDAASPTAVTVLTGDGTPVAVLPGSATGRVWPLGFAP-GTGPARLLLVVE 403

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           ++    + +            +    +    AS+ PD ++++   DR     LY +  + 
Sbjct: 404 ENGEYALATWTRAGGLAR---HEWRFDTEITASWYPDGTRVLVRQDRHAGSHLYCVDLSA 460

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             +  +     +      W P GD +A+ 
Sbjct: 461 GTRTEVPTPAGSILDAAAW-PDGD-VAYV 487


>gi|168038197|ref|XP_001771588.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677144|gb|EDQ63618.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 672

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 16/113 (14%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGV--MKKDGSQERLLVEDSNLQ---- 393
            +  Y  P  SP G ++A+ ++S         +I V  +  DGS    +      +    
Sbjct: 179 GKDFYMFPRLSPDGQMLAWMEWSHPNMPWDRTSIWVGKVSDDGSITNPVCVAGGDEGVVE 238

Query: 394 ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
               P WSP G  LIF   + G+    LYS  + G+ ++L    A  + P W+
Sbjct: 239 SASEPQWSPKGD-LIFVSDR-GNGFWNLYSWSVGGKVQSLCPMEAEFTRPAWI 289



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 57/303 (18%), Positives = 106/303 (34%), Gaps = 55/303 (18%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +     R + + E   SG     +      G N+R L            F+  +  V ++
Sbjct: 46  RPSEAGRGVLMWEGAQSGSFPEEITPP---GFNVRTLVHEYGGG----AFAVKRDNVVFS 98

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS---SNGKRALISVQKDEAM---- 282
            Y D+   R+Y    R DR P  +        A R++    +G+   + V +++      
Sbjct: 99  NYADQ---RLYKQSIRGDRTPLPLT-PAYENKAVRYADGIFDGRFNRLIVVREDYRQEGV 154

Query: 283 ----DIYSVDLQSN---ATERLTNTLFINISASYSPDSSQIVFE--------SDREGKEQ 327
               DI +V L          L       +    SPD   + +          DR     
Sbjct: 155 EPVNDIAAVSLNGEANLEPVSLVKGKDFYMFPRLSPDGQMLAWMEWSHPNMPWDRT---S 211

Query: 328 LYV--MQSNGS--DQKRISQDKEA---SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           ++V  +  +GS  +   ++   E    S  +P WSP+GDLI  +      + +      G
Sbjct: 212 IWVGKVSDDGSITNPVCVAGGDEGVVESASEPQWSPKGDLIFVSDRGNGFWNLYSWSVGG 271

Query: 381 SQERLLVEDSNLQAPTWS----------PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             + L   ++    P W            SG  ++ + ++ G   S L + DL+  + + 
Sbjct: 272 KVQSLCPMEAEFTRPAWIFGISSFGFFGDSGDQIVCAYRQRG--VSHLATFDLSSGSLSP 329

Query: 431 INT 433
           + T
Sbjct: 330 VKT 332


>gi|127511708|ref|YP_001092905.1| peptidase S9B dipeptidylpeptidase IV subunit [Shewanella loihica
           PV-4]
 gi|126637003|gb|ABO22646.1| peptidase S9B, dipeptidylpeptidase IV domain protein [Shewanella
           loihica PV-4]
          Length = 750

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 48/329 (14%), Positives = 118/329 (35%), Gaps = 28/329 (8%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
              ++D++ +K +         A    +A  ++ +    +TG     +   +  +    S
Sbjct: 182 NLYVFDLRTQK-LTAMTTDGGGAIKNGMAEFVAQEEMDRMTGYWWAPDESAIAFTRIDES 240

Query: 187 GIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           G+   +   +  DG      RY    ++ +            +   T  ++ +  V L +
Sbjct: 241 GVELVTRNEIYADGIKLTEQRYPYAGKNNVAIA---------LGVVTLANKQVRWVDLGE 291

Query: 244 TRIDRAPKRIGNFRSMILAPRF-SSNGKRA---LISVQKDEAMDIYSVDLQSNATERLTN 299
            +    P+      S+ L+ ++ S +  R    ++ ++  +A     +  +S+A   L N
Sbjct: 292 DKDIYLPRVKWLPDSLQLSFQWQSRDQHRLDLRILDLRSQDAPMTM-IREESDAWVNLNN 350

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            L+      +   S Q+++ S+R+G   LY+    G   +++++   A         Q  
Sbjct: 351 DLY------FLKKSPQMLWASERDGFNHLYLFDQQGRQLRQLTKGDWAVDELVHVDEQEG 404

Query: 360 LIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            + FT       +  +  +   G +   L + S + AP ++   +++            +
Sbjct: 405 WVYFTGRKASVVEQHLFRVPLKGGKIEQLSKRSGMHAPVFA-DNQAIYLDYFNSLAQPPQ 463

Query: 418 LYSIDLNGRNETLINTP-AYASDPQWVGF 445
           +   D  G+    +       S P +  F
Sbjct: 464 ISLHDEQGKRLAWVEQNQVDKSHPLYPYF 492


>gi|294817686|ref|ZP_06776328.1| Peptidase S9 [Streptomyces clavuligerus ATCC 27064]
 gi|294322501|gb|EFG04636.1| Peptidase S9 [Streptomyces clavuligerus ATCC 27064]
          Length = 869

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 2/85 (2%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPT 396
            R           P  SP G+ +AF         +        + R +  D    ++A  
Sbjct: 255 PRALLFGNPDRMSPALSPDGEHLAFLAPYDGVLNVYAGPWRSGEYRPVTADRGRGIRAFA 314

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
           W+  GR L+F + +DGD  ++LY++
Sbjct: 315 WAGDGRHLLFVQDRDGDENTRLYAV 339



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 59/166 (35%), Gaps = 14/166 (8%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS- 308
           P+ +       ++P  S +G+        D  +++Y+   +S     +T      I A  
Sbjct: 255 PRALLFGNPDRMSPALSPDGEHLAFLAPYDGVLNVYAGPWRSGEYRPVTADRGRGIRAFA 314

Query: 309 YSPDSSQIVFESDREG--KEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           ++ D   ++F  DR+G    +LY + + +G+          A    P    Q  +IA   
Sbjct: 315 WAGDGRHLLFVQDRDGDENTRLYAVPAGSGAPPAATPAPAPARDLTPYPGVQARIIALDP 374

Query: 366 FSGEKFAIGV----------MKKDGSQERLLVEDSNLQAPTWSPSG 401
            +     IG+           + D +  RL +   N     W   G
Sbjct: 375 RTPGGLLIGLNLRERSVHDAYRLDIASGRLELAARNEGFSRWVADG 420



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 69/256 (26%), Gaps = 31/256 (12%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            +     P  SP+ + +A+     + +L VY    R         +    I A  ++ +G
Sbjct: 261 GNPDRMSPALSPDGEHLAFLA-PYDGVLNVYAGPWRSGEYRPVTADRGRGIRAFAWAGDG 319

Query: 270 KRALISVQKDE--AMDIYSVDLQSN----------ATERLTNTLF-----INISASYSPD 312
           +  L    +D      +Y+V   S               LT         I +    +P 
Sbjct: 320 RHLLFVQDRDGDENTRLYAVPAGSGAPPAATPAPAPARDLTPYPGVQARIIALDPR-TPG 378

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTKFSGE 369
              I            Y +       +  ++    +     W   G      A       
Sbjct: 379 GLLIGLNLRERSVHDAYRLDIASGRLELAAR----NEGFSRWVADGGLRVRGAVRPRPDG 434

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              + V   + +  R L E     A       ++  G  L     +  DT   L     N
Sbjct: 435 GSTLLVRADESAPWRPLHETGPEDAVALRPVAFTSDGTRLHLLSSRGADTARLLSVDTTN 494

Query: 425 GRNETLINTPAYASDP 440
           GR E       Y  D 
Sbjct: 495 GRYEVRYEDGEYDVDG 510



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 28/83 (33%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D  +     L       +S + SPD   + F +  +G   +Y       + + ++ D+  
Sbjct: 249 DASALIPRALLFGNPDRMSPALSPDGEHLAFLAPYDGVLNVYAGPWRSGEYRPVTADRGR 308

Query: 348 SYFDPVWSPQGDLIAFTKFSGEK 370
                 W+  G  + F +     
Sbjct: 309 GIRAFAWAGDGRHLLFVQDRDGD 331


>gi|294023749|ref|YP_003547068.1| putative peptidase [Sphingobium japonicum UT26S]
 gi|292677529|dbj|BAI99045.1| putative peptidase [Sphingobium japonicum UT26S]
          Length = 747

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 61/191 (31%), Gaps = 36/191 (18%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF---SSNGKRALISV 276
           SP+   +  AT       R   +        + IG       A      S +G+     +
Sbjct: 30  SPDCADIISAT----GHSRASRLQPEDMIRLRDIGPPDGSAAAAGLISASPDGRHLAFQI 85

Query: 277 QK-DEAMDIY-----SVDLQSNATERL---------------------TNTLFINISASY 309
           ++ D A + Y      ++ +  A  R+                          + I   +
Sbjct: 86  RRADPAANGYCLAMVVMEARPGAVPRIVDQGGVLIRYQYDDLWGLAGWPTGWPVEIVPRW 145

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S D   I F   +  + Q++  + +GS  + +++  +       W+  G  I F+     
Sbjct: 146 SADGQWIAFLKKQGARVQVWRARVDGSSSQAVTRSPD-DVVGFAWTGDGG-IIFSTRPEY 203

Query: 370 KFAIGVMKKDG 380
              +  ++ +G
Sbjct: 204 GRRLAAIESEG 214



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 30/143 (20%)

Query: 310 SPDSSQIVFESDREGKEQ------LYVMQSNGSDQKRISQDKEASYFD------------ 351
           SPD   + F+  R           + VM++      RI                      
Sbjct: 75  SPDGRHLAFQIRRADPAANGYCLAMVVMEARPGAVPRIVDQGGVLIRYQYDDLWGLAGWP 134

Query: 352 --------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGR 402
                   P WS  G  IAF K  G +  +   + DGS  + +    +      W+  G 
Sbjct: 135 TGWPVEIVPRWSADGQWIAFLKKQGARVQVWRARVDGSSSQAVTRSPDDVVGFAWTGDGG 194

Query: 403 SLIFSRKKDGDTGSKLYSIDLNG 425
            +IFS +   + G +L +I+  G
Sbjct: 195 -IIFSTRP--EYGRRLAAIESEG 214



 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 12/85 (14%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFS 266
           P+   +   PR+S + Q +A+     +   RV +   R+D +  + +      ++   ++
Sbjct: 134 PTGWPVEIVPRWSADGQWIAFL---KKQGARVQVWRARVDGSSSQAVTRSPDDVVGFAWT 190

Query: 267 SNGKRALISVQKDEAMDIYSVDLQS 291
            +G   + S + +    + +++ + 
Sbjct: 191 GDGG-IIFSTRPEYGRRLAAIESEG 214


>gi|229082984|ref|ZP_04215404.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock4-2]
 gi|228700321|gb|EEL52887.1| Acylamino-acid-releasing enzyme [Bacillus cereus Rock4-2]
          Length = 165

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 8/117 (6%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDS 313
           + +   S +GK      +  +  D      ++  +     +  L+N    +    +SPD+
Sbjct: 20  VSSTNISDDGKNVAFVKKTADWKDNTYRNHVWIYEKDKKQSYPLSNGDIDSTHPLWSPDA 79

Query: 314 SQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             I + S   +G+ Q++V   +   + +I+ +KE       W P G  + +   S E
Sbjct: 80  RCIAYLSPVGDGENQIFVKSLDDYREVQITDEKEG-VSTFKWGPTGKGLYYVTQSKE 135



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 44/113 (38%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++ + +      +S + +     P+WSP   
Sbjct: 22  STNISDDGKNVAFVKKTADWKDNTYRNHVWIYEKDKKQSYPLS-NGDIDSTHPLWSPDAR 80

Query: 360 LIAFTKFSG-EKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKK 410
            IA+    G  +  I V   D  +E  + ++   +    W P+G+ L +  + 
Sbjct: 81  CIAYLSPVGDGENQIFVKSLDDYREVQITDEKEGVSTFKWGPTGKGLYYVTQS 133



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 41/103 (39%), Gaps = 4/103 (3%)

Query: 177 ILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + FV ++        +N + + ++D     Y   + D     P +SP+ + +AY +   +
Sbjct: 32  VAFVKKTADWKDNTYRNHVWIYEKD-KKQSYPLSNGDIDSTHPLWSPDARCIAYLSPVGD 90

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              ++++     D    +I + +  +   ++   GK      Q
Sbjct: 91  GENQIFVKSLD-DYREVQITDEKEGVSTFKWGPTGKGLYYVTQ 132


>gi|229135177|ref|ZP_04263977.1| TolB domain protein [Bacillus cereus BDRD-ST196]
 gi|228648305|gb|EEL04340.1| TolB domain protein [Bacillus cereus BDRD-ST196]
          Length = 412

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 82/256 (32%), Gaps = 51/256 (19%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +S I     + V      +  +  + G   + +T    + +  P++S N + +AYA    
Sbjct: 18  SSSITSAENNGVKVAFIRNHNLWIKVGEKEKQITKG--EYITGPKWSHNGEWLAYAKGKK 75

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            +   +Y +     +  K++   +S     ++S           +     + + D +   
Sbjct: 76  RNHFELYRL-----KDGKKVTPSQSEASNYQWSPTENIIAFVFAR----TLNTFDAEKKK 126

Query: 294 T--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-- 349
              E + N +      ++ PD  + +  S+       +     G+    I +D   +   
Sbjct: 127 ADFENVANGVGDY---AWYPDGKKFLVSSEAYLLPTGWT----GAQLYEIQKDANMNPHK 179

Query: 350 -------------------FDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS---- 381
                                  WSP    I+F        S +   + +++ DGS    
Sbjct: 180 MKHLYALPNEHDDFLALVGSGFKWSPDQKWISFLAVPTASVSADSNTLCLIRSDGSRFET 239

Query: 382 -QERLLVEDSNLQAPT 396
             + LL       AP+
Sbjct: 240 VDQMLLNTQWFKWAPS 255



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 21/159 (13%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG +      ++  + I          +++T   +I     +S +   + +   ++ +  
Sbjct: 27  NGVKVAFI--RNHNLWIKV----GEKEKQITKGEYI-TGPKWSHNGEWLAYAKGKK-RNH 78

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLL 386
             + +     +   SQ + ++Y    WSP  ++IAF    +   F     K D       
Sbjct: 79  FELYRLKDGKKVTPSQSEASNY---QWSPTENIIAFVFARTLNTFDAEKKKADFENVANG 135

Query: 387 VEDSNLQAPTWSPSGRSLIFSRK----KDGDTGSKLYSI 421
           V D       W P G+  + S +      G TG++LY I
Sbjct: 136 VGDY-----AWYPDGKKFLVSSEAYLLPTGWTGAQLYEI 169



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 10/88 (11%)

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +AF +       + +  K G +E+ + +   +  P WS +G  L +++ K      
Sbjct: 27  NGVKVAFIR----NHNLWI--KVGEKEKQITKGEYITGPKWSHNGEWLAYAKGKK-RNHF 79

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVG 444
           +LY +  +G+   +  + + AS+ QW  
Sbjct: 80  ELYRLK-DGKK--VTPSQSEASNYQWSP 104


>gi|145351604|ref|XP_001420161.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580394|gb|ABO98454.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 617

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 48/254 (18%), Positives = 92/254 (36%), Gaps = 45/254 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMILAP----RFSSNGKRA 272
           FS +  +V +   +DED     +   R  + P+ I    F     AP     FS  GK  
Sbjct: 334 FSDSVVRVWHLEEEDEDDKDKEIPVDRDAKTPRSIPMTEFVGH-SAPVQQVAFSPCGKFL 392

Query: 273 LISVQKDEAMDIYSVDLQ------SNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           L SV +D  + ++S++L+                   ++   +SP        +  +   
Sbjct: 393 L-SVSRDCHVRVWSMELKICLCAYEGHL-----HPIWDVQ--WSPFGHYFA-TACHDRVA 443

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           ++Y M +     +R+     ++     W P  + +A T  +     +  M  DG   R+ 
Sbjct: 444 RVYAMDAPF--PRRMFVGHLSNVDCVAWHPNCNYVA-TGSADRTVRLWDM-FDGECVRVF 499

Query: 387 V-EDSNLQAPTWSPSGRSLIFSRK-----------------KDGDTGSKLYSIDLNGRNE 428
               + ++A  ++P GR++  +                     G  G  +YS+D  G   
Sbjct: 500 AGHAAGVRAIVFAPDGRTIASASDDGRICMWDLRRASCVISYKGHVGP-VYSMDFAGGGN 558

Query: 429 TLINTPAYASDPQW 442
            L++  A  +   W
Sbjct: 559 LLVSGGADDTVRVW 572



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/270 (16%), Positives = 84/270 (31%), Gaps = 38/270 (14%)

Query: 155 AH--TISDDIYQSITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYL----T 207
           AH   I  D    +    G F+  ++ V          K+    +DRD    R +     
Sbjct: 314 AHGLLICADATGDVKHVAGGFSDSVVRVWHLEEEDEDDKDKEIPVDRDAKTPRSIPMTEF 373

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                 + +  FSP  + +   + D    +RV+ M+ +I             I   ++S 
Sbjct: 374 VGHSAPVQQVAFSPCGKFLLSVSRDCH--VRVWSMELKICLCAYEGHLHP--IWDVQWSP 429

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES-DREGK 325
            G     +   D    +Y++D       R+      N+   ++ P+ + +   S DR   
Sbjct: 430 FGHYFA-TACHDRVARVYAMDAPF--PRRMFVGHLSNVDCVAWHPNCNYVATGSADRT-- 484

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA------------------FTKFS 367
             + +      +  R+     A     V++P G  IA                     + 
Sbjct: 485 --VRLWDMFDGECVRVFAGHAAGVRAIVFAPDGRTIASASDDGRICMWDLRRASCVISYK 542

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           G    +  M   G    L+   ++     W
Sbjct: 543 GHVGPVYSMDFAGGGNLLVSGGADDTVRVW 572


>gi|62896577|dbj|BAD96229.1| achalasia, adrenocortical insufficiency, alacrimia (Allgrove,
           triple-A) variant [Homo sapiens]
          Length = 546

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  DD     V + +      P      +  + +  +       L    
Sbjct: 158 AWHPHTNKFAVALLDD----SVRVYNASSTIVPSLKHRLQRNVASLAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIR 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  I  T  S   F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKILATTPS-AVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGSRLLFT 346



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 37/338 (10%), Positives = 98/338 (28%), Gaps = 49/338 (14%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSI-----TGEKGDFNSRILFVSESVVSGII 189
           + + + G  + S P  +R     I+  + Q       T  + D  +R  F+         
Sbjct: 22  NNELVTGSSYESPPPDFR--GQWINLPVLQLTKDPLKTPGRLDHGTRTAFIHHREQVWKR 79

Query: 190 KNSLC-----------VMDRDGANIRYLTPSRDQILFEPRFSPN--QQKVAYATYDDEDI 236
             ++            + + +     ++  +    L   R++P+       + +   ED+
Sbjct: 80  CINIWRDVGLFGVLNEIANSEEEVFEWVKTASGWALALCRWAPSLHGSLFPHLSLRSEDL 139

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           +  +   T       R+           +  +  +  +++  D    +   +  S     
Sbjct: 140 IAEFAQVTNWSSCCLRVF---------AWHPHTNKFAVALLDD---SVRVYNASSTIVPS 187

Query: 297 LTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQS-------NGSDQKRISQDKEAS 348
           L + L  N+ S ++ P S+ ++  + +     ++ +         +    + +S      
Sbjct: 188 LKHRLQRNVASLAWKPLSASVLAVACQS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTP 246

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                W+P G  +           +  +  +            +    WSP G  ++   
Sbjct: 247 VTSLAWAPSGGRLLSASPVDAAIRVWDVSTETCVPLPWFRGGGVTNLLWSPDGSKIL--- 303

Query: 409 KKDGDTGSKLYSIDLNGRN--ETLINTPAYASDPQWVG 444
                T S ++ +        E             W  
Sbjct: 304 ---ATTPSAVFRVWEAQMWTCERWPTLSGRCQTGCWSP 338


>gi|12962937|ref|NP_056480.1| aladin isoform 1 [Homo sapiens]
 gi|20137527|sp|Q9NRG9|AAAS_HUMAN RecName: Full=Aladin; AltName: Full=Adracalin
 gi|9295335|gb|AAF86948.1|AF226048_1 GL003 [Homo sapiens]
 gi|11493150|emb|CAC17465.1| AAAS protein [Homo sapiens]
 gi|11877233|emb|CAC19017.1| adracalin [Homo sapiens]
 gi|11878424|emb|CAC19038.1| adracalin [Homo sapiens]
 gi|12653747|gb|AAH00659.1| Achalasia, adrenocortical insufficiency, alacrimia (Allgrove,
           triple-A) [Homo sapiens]
 gi|30582663|gb|AAP35558.1| achalasia, adrenocortical insufficiency, alacrimia (Allgrove,
           triple-A) [Homo sapiens]
 gi|60655219|gb|AAX32173.1| achalasia [synthetic construct]
 gi|60655221|gb|AAX32174.1| achalasia [synthetic construct]
 gi|119617098|gb|EAW96692.1| achalasia, adrenocortical insufficiency, alacrimia (Allgrove,
           triple-A), isoform CRA_a [Homo sapiens]
 gi|123993261|gb|ABM84232.1| achalasia, adrenocortical insufficiency, alacrimia (Allgrove,
           triple-A) [synthetic construct]
 gi|123994377|gb|ABM84790.1| achalasia, adrenocortical insufficiency, alacrimia (Allgrove,
           triple-A) [synthetic construct]
          Length = 546

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  DD     V + +      P      +  + +  +       L    
Sbjct: 158 AWHPHTNKFAVALLDD----SVRVYNASSTIVPSLKHRLQRNVASLAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIR 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  I  T  S   F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKILATTPS-AVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGSRLLFT 346


>gi|242066984|ref|XP_002454781.1| hypothetical protein SORBIDRAFT_04g037240 [Sorghum bicolor]
 gi|241934612|gb|EES07757.1| hypothetical protein SORBIDRAFT_04g037240 [Sorghum bicolor]
          Length = 375

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/229 (17%), Positives = 81/229 (35%), Gaps = 37/229 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+Q  +A+   + E  + +Y   T        +     ++    +S +  + + +V 
Sbjct: 17  AWSPDQSMIAFCPNNHE--VHIYKFFTDKWEKLHVLSKHDQIVSGIDWSKSSNKIV-TVS 73

Query: 278 KDEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D    +++ +        +    N   + +   +SP  ++    S   G + + V    
Sbjct: 74  HDRNSYVWTQEGSDWVPTLVILKLNRAALCVQ--WSPKENKFAVGS---GAKSVCVCYYE 128

Query: 335 GSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGV--MKKDGSQERLL 386
             +     K I +  E+S     W P    +A T   G    F+  +  + K G+Q    
Sbjct: 129 QENNWWISKVIRKRHESSVTSLAWHPNNIYLATTSTDGKCRVFSTFIKGVDKRGTQSSTS 188

Query: 387 VEDSNLQ-------------APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +    +                WSPSG++L ++        S +Y ID
Sbjct: 189 TDSKFGEQIAQLDLSSTWVFGVRWSPSGKTLAYA-----GHNSMVYFID 232



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 59/198 (29%), Gaps = 19/198 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +     D     ++    DQI+    +S +  K+   ++D      V+  +         
Sbjct: 36  IYKFFTDKWEKLHVLSKHDQIVSGIDWSKSSNKIVTVSHDRNS--YVWTQEGSDWVPTLV 93

Query: 253 IGNFRSMILAPRFSSN---------GKRALISVQKDEAMDIYSVDLQSNATERLTN---T 300
           I       L  ++S            K   +   + E     S  ++      +T+    
Sbjct: 94  ILKLNRAALCVQWSPKENKFAVGSGAKSVCVCYYEQENNWWISKVIRKRHESSVTSLAWH 153

Query: 301 LFINISASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                 A+ S D    VF +     D+ G +      S   +Q           F   WS
Sbjct: 154 PNNIYLATTSTDGKCRVFSTFIKGVDKRGTQSSTSTDSKFGEQIAQLDLSSTWVFGVRWS 213

Query: 356 PQGDLIAFTKFSGEKFAI 373
           P G  +A+   +   + I
Sbjct: 214 PSGKTLAYAGHNSMVYFI 231


>gi|224135493|ref|XP_002322087.1| predicted protein [Populus trichocarpa]
 gi|222869083|gb|EEF06214.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 25/153 (16%)

Query: 198 RDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            +G   ++ +  RD   F    RFSP+  K    + D + I    L D +       + +
Sbjct: 173 YEGPPFKFKSSHRDHSNFVNCIRFSPDGSKFISVSSDKKGI----LFDGKTGEKIGELSS 228

Query: 256 ---FRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLT--NTLFIN---I 305
               +  I A  +S +GK+ L +V  D++  ++ +  D     T+ LT  ++  ++   +
Sbjct: 229 EDGHKGSIYAVSWSPDGKQVL-TVSADKSAKVWEICDDGSGKLTKTLTSSDSGGVDDMLV 287

Query: 306 SASYSPD--------SSQIVFESDREGKEQLYV 330
           S  +  D         +  VF +   GK  L +
Sbjct: 288 SCLWQNDHLVTVSLGGTISVFSASDLGKSALQI 320



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 89/272 (32%), Gaps = 65/272 (23%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            P   K+ Y      +   + +++          G         R+S NG+    S    
Sbjct: 25  HPKTNKILYT-----NNRSILILNLDNPLDVSVYGEHAYQATVARYSPNGEWIA-SADVS 78

Query: 280 EAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL--------- 328
             + I+    D       ++      ++   +SPD  +IV   D +GK  +         
Sbjct: 79  GTVRIWGAYNDHVLKKEFKVLTGRIDDLQ--WSPDGLRIVASGDGKGKSLVRAFMWDSGT 136

Query: 329 YVMQSNGSDQKRIS----------------------------------QDKEASYFDPVW 354
            V + +G  ++ +S                                  +D         +
Sbjct: 137 NVGEFDGHSRRVLSCAFKPTRPFRIVTCGEDFLVNFYEGPPFKFKSSHRDHSNFVNCIRF 196

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAPTWSPSGRSLIFSRKK 410
           SP G    F   S +K  I    K G +   L  +     ++ A +WSP G+ ++     
Sbjct: 197 SPDGSK--FISVSSDKKGILFDGKTGEKIGELSSEDGHKGSIYAVSWSPDGKQVL---TV 251

Query: 411 DGDTGSKLYSI--DLNGR-NETLINTPAYASD 439
             D  +K++ I  D +G+  +TL ++ +   D
Sbjct: 252 SADKSAKVWEICDDGSGKLTKTLTSSDSGGVD 283



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 62/179 (34%), Gaps = 14/179 (7%)

Query: 219 FSPNQQKVAYATYDDEDIL-RVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALI 274
           +SP+  ++  +       L R ++ D+  +     +G F      +L+  F       ++
Sbjct: 108 WSPDGLRIVASGDGKGKSLVRAFMWDSGTN-----VGEFDGHSRRVLSCAFKPTRPFRIV 162

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +  +D  ++ Y        +    ++ F+N    +SPD S+  F S    K+ +      
Sbjct: 163 TCGEDFLVNFYEGPPFKFKSSHRDHSNFVNC-IRFSPDGSK--FISVSSDKKGILFDGKT 219

Query: 335 GSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           G     +S     + S +   WSP G  +             +      +    +  S+
Sbjct: 220 GEKIGELSSEDGHKGSIYAVSWSPDGKQVLTVSADKSAKVWEICDDGSGKLTKTLTSSD 278



 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 43/121 (35%), Gaps = 10/121 (8%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +++ SPD S+      ++GK  +Y +  +   +  + +    +     +SP    ++  
Sbjct: 451 TASAISPDGSE-AIIGGQDGKLHIYSVTGDTLTEDAVLEKHRGAVSVIRYSPD---VSMF 506

Query: 365 KFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                     V  +   + +L   L   + +    WSP    +        DT   +Y I
Sbjct: 507 ASGDLNREAVVWDRASREVKLKNMLYHTARINCLAWSPDSSMVATGSL---DTCIIIYEI 563

Query: 422 D 422
           D
Sbjct: 564 D 564


>gi|126644100|ref|XP_001388187.1| notchless [Cryptosporidium parvum Iowa II]
 gi|126117112|gb|EAZ51212.1| notchless [Cryptosporidium parvum Iowa II]
          Length = 535

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/256 (15%), Positives = 90/256 (35%), Gaps = 47/256 (18%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
           I+  +    +++   +     W  +  + +V        +D L    ++W+ +  + +  
Sbjct: 280 ITTGTIINTLSSHTEMITHVKWTGINQEYVV-----SSSRDSL---IKVWNPETGQLLRD 331

Query: 142 KK---------------------FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
            K                     ++ +  + +    ++ D I  +      +F  R  F 
Sbjct: 332 LKGHAHWVNTLALNTDYITRSACYYPTGKNLKLNFKSLQDKI-AAAKQSVDNFKKRCKF- 389

Query: 181 SESVVSGIIKNSLCVMDRDGANIR---YLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            E ++SG   N++ + D  G N R   +      +++    FSP+ + +A A++D     
Sbjct: 390 -ERLLSGSDDNTMFLWDPLGENGRKPIHRLTGHLKVVNHVAFSPDGRYIASASFDK---- 444

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-------DLQ 290
            + L D    +    +      +    +S + +    S   D  + ++ V       DL 
Sbjct: 445 TIRLWDGHSGKFIAVLRGHVGPVYMISWSVDSRLIA-SASSDSTVKVWHVSSKKLKEDLP 503

Query: 291 SNATERLTNTLFINIS 306
            +A E  T    I+ S
Sbjct: 504 GHADEVYTIDWSIDGS 519



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 35/115 (30%), Gaps = 8/115 (6%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               RLT  L +    ++SPD   I   S     + + +   +      + +      + 
Sbjct: 413 KPIHRLTGHLKVVNHVAFSPDGRYIASASF---DKTIRLWDGHSGKFIAVLRGHVGPVYM 469

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSL 404
             WS    LIA          + V      + +  +     +  T  WS  G  L
Sbjct: 470 ISWSVDSRLIASASSDST---VKVWHVSSKKLKEDLPGHADEVYTIDWSIDGSRL 521


>gi|117165012|emb|CAJ88564.1| putative secreted protein [Streptomyces ambofaciens ATCC 23877]
          Length = 404

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/305 (11%), Positives = 82/305 (26%), Gaps = 31/305 (10%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF---SPNQQ 224
            E+G    R L++            + + + D              + +P +    P+ +
Sbjct: 57  RERGPSGPRPLYLGTYTSVEGGGRGIGLAEYDPHTGEITGRGTVTGVADPSYLAVHPDGR 116

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +       +  +    +  R     +  G   +  L+      G+  L +     ++ +
Sbjct: 117 TLYAVNERVDGAVTAVRLSDRTVLGSRSTGGSGTCHLS--VHPRGRWLLSADYGSGSVAV 174

Query: 285 YSVDLQS--NATERLTNTLFINISASY----------SPDSSQIVFESDREGKEQLYVMQ 332
           + +           L                      SPD   ++           Y + 
Sbjct: 175 HPIGASGALGERTDLVTHSAPPPGPGQQGPHAHQILTSPDGGHVLAVDLGTDTVHTYRLD 234

Query: 333 SNGS---DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL---- 385
                  +  R      A      + P G          +  A+     D  +  +    
Sbjct: 235 ERAGTLTEMGRARTRPGAGPRHLTFHPDGRHAYLANEVDDTVAVCAFDPDTGRLTIGEAQ 294

Query: 386 -LVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDP 440
                     P     +P G    F   +  D+ ++ Y+++ +G    L++T P     P
Sbjct: 295 PTGSGGGTNHPAQILVTPDGAY-AFLANRGHDSITR-YAVESDGARLRLLDTVPVGGDFP 352

Query: 441 QWVGF 445
           + + F
Sbjct: 353 RHIAF 357



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 61/177 (34%), Gaps = 15/177 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALISV 276
           SP+   V        D +  Y +D R     +           PR   F  +G+ A ++ 
Sbjct: 212 SPDGGHVLAVDLGT-DTVHTYRLDERAGTLTEMGRARTRPGAGPRHLTFHPDGRHAYLAN 270

Query: 277 QKDEAMDIYSVDLQSNATE----RLTNTLFINISAS---YSPDSSQIVFESDREGKEQL- 328
           + D+ + + + D  +        + T +       +    +PD +   F ++R       
Sbjct: 271 EVDDTVAVCAFDPDTGRLTIGEAQPTGSGGGTNHPAQILVTPDGAY-AFLANRGHDSITR 329

Query: 329 YVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           Y ++S+G+  + +        F     +SP G L+          ++  +  D  + 
Sbjct: 330 YAVESDGARLRLLDTVPVGGDFPRHIAFSPDGGLLFAANQKSGDVSVFRVAGDSGEL 386



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/327 (12%), Positives = 88/327 (26%), Gaps = 44/327 (13%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           L  G           +    +D     +I G+   +           ++D  Y ++    
Sbjct: 67  LYLGTYTSVEGGGRGIGLAEYDPHTG-EITGRGTVTG----------VADPSYLAVHP-- 113

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
              + R L+     V G +     V   D   +   +             P  + +  A 
Sbjct: 114 ---DGRTLYAVNERVDGAVT---AVRLSDRTVLGSRSTGGSGTCHL-SVHPRGRWLLSAD 166

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----------SSNGKRALISVQKDE 280
           Y    +    +  +        +    +    P            S +G   L      +
Sbjct: 167 YGSGSVAVHPIGASGALGERTDLVTHSAPPPGPGQQGPHAHQILTSPDGGHVLAVDLGTD 226

Query: 281 AMDIYSVDLQSNATERL----TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +  Y +D ++     +    T         ++ PD       ++ +    +     +  
Sbjct: 227 TVHTYRLDERAGTLTEMGRARTRPGAGPRHLTFHPDGRHAYLANEVDDTVAVCAFDPDTG 286

Query: 337 ----DQKRISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VED 389
                + + +     +        +P G          +      ++ DG++ RLL    
Sbjct: 287 RLTIGEAQPTGSGGGTNHPAQILVTPDGAYAFLANRGHDSITRYAVESDGARLRLLDTVP 346

Query: 390 SNLQAP---TWSPSGRSLIFSRKKDGD 413
                P    +SP G  L  + +K GD
Sbjct: 347 VGGDFPRHIAFSPDGGLLFAANQKSGD 373



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 18/133 (13%), Positives = 44/133 (33%), Gaps = 10/133 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP---KRIGNFRSMILAPR---FSSNGKR 271
            F P+  + AY   + +D + V   D    R      +          P     + +G  
Sbjct: 258 TFHPDG-RHAYLANEVDDTVAVCAFDPDTGRLTIGEAQPTGSGGGTNHPAQILVTPDGAY 316

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQL 328
           A ++ +  +++  Y+V+        L              +SPD   +   + + G   +
Sbjct: 317 AFLANRGHDSITRYAVESDGARLRLLDTVPVGGDFPRHIAFSPDGGLLFAANQKSGDVSV 376

Query: 329 YVMQSNGSDQKRI 341
           + +  +  +   +
Sbjct: 377 FRVAGDSGELGPV 389


>gi|17548500|ref|NP_521840.1| signal peptide protein [Ralstonia solanacearum GMI1000]
 gi|17430747|emb|CAD17430.1| putative periplasmic component of the tol transport system
           tolb-related signal peptide protein [Ralstonia
           solanacearum GMI1000]
          Length = 475

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 47/265 (17%), Positives = 83/265 (31%), Gaps = 25/265 (9%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYATYDDED 235
           L     V  G   + L + D     +  ++ S   I       FSP+ + +A+    + +
Sbjct: 47  LAYHSYVSYGDGTSQLFIYDFAARTLTQVSKSAWGIQDPMNAVFSPDGKWLAFMGITN-N 105

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-- 291
              V+L        P  + N         P+FS++GK        D      S       
Sbjct: 106 AWNVFLWQVGSSSQPVNMTNSTGQTRNEDPKFSADGKSLFFKQSGDVMQATLSYTSTGPI 165

Query: 292 -NATERLTNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             +   +TNT     N     +PD S + F +       LY                   
Sbjct: 166 FTSVVDITNTAPATENSMPFATPDGSAVYFATGTGAGMGLYKETIATHATFAFDTPAGLQ 225

Query: 349 YFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLV-----EDSNLQAPTWSPS 400
            + P+    G  + + ++     +   I      G     L       +++  AP    +
Sbjct: 226 TYYPIVRADGT-VFYARWKDAASQADQIYTKVNPGDTPNQLSINDCNSNNSDPAPV---N 281

Query: 401 GR-SLIFSRKKDGDTGSKLYSIDLN 424
           G   + FS    G  G +LY  D++
Sbjct: 282 GTNYVFFSSTTAG--GYQLYLGDVS 304



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + S  +G  QL++         ++S+         + V+SP G  +AF   +   + + +
Sbjct: 52  YVSYGDGTSQLFIYDFAARTLTQVSKSAWGIQDPMNAVFSPDGKWLAFMGITNNAWNVFL 111

Query: 376 MKKDGS----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +   S            +  + P +S  G+SL F  K+ GD      S    G
Sbjct: 112 WQVGSSSQPVNMTNSTGQTRNEDPKFSADGKSLFF--KQSGDVMQATLSYTSTG 163



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 55/161 (34%), Gaps = 11/161 (6%)

Query: 225 KVAYATY----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           K+AY +Y    D    L +Y    R      +        +   FS +GK        + 
Sbjct: 46  KLAYHSYVSYGDGTSQLFIYDFAARTLTQVSKSAWGIQDPMNAVFSPDGKWLAFMGITNN 105

Query: 281 AMDIYSVDL-QSNATERLTNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNG-- 335
           A +++   +  S+    +TN+     N    +S D   + F+   +  +      S G  
Sbjct: 106 AWNVFLWQVGSSSQPVNMTNSTGQTRNEDPKFSADGKSLFFKQSGDVMQATLSYTSTGPI 165

Query: 336 -SDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIG 374
            +    I+    A+    P  +P G  + F   +G    + 
Sbjct: 166 FTSVVDITNTAPATENSMPFATPDGSAVYFATGTGAGMGLY 206



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/222 (10%), Positives = 64/222 (28%), Gaps = 11/222 (4%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
                 + +      L  +      +     +      +P+FS + + + +      D++
Sbjct: 96  WLAFMGITNNAWNVFLWQVGSSSQPVNMTNSTGQTRNEDPKFSADGKSLFF--KQSGDVM 153

Query: 238 RVYLMDTRIDRAPKRI-----GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           +  L  T        +         +    P  + +G     +      M +Y   + ++
Sbjct: 154 QATLSYTSTGPIFTSVVDITNTAPATENSMPFATPDGSAVYFATGTGAGMGLYKETIATH 213

Query: 293 ATERLTNTLFINI-SASYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRIS-QDKEAS 348
           AT        +         D +             +Q+Y   + G    ++S  D  ++
Sbjct: 214 ATFAFDTPAGLQTYYPIVRADGTVFYARWKDAASQADQIYTKVNPGDTPNQLSINDCNSN 273

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             DP      + + F+  +   + + +      Q   L +  
Sbjct: 274 NSDPAPVNGTNYVFFSSTTAGGYQLYLGDVSTGQRWSLSQFG 315



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 9/88 (10%), Positives = 28/88 (31%), Gaps = 6/88 (6%)

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           +  +      + +          + + +    +     +SP G+ L F    +      L
Sbjct: 52  YVSYGDGTSQLFIYDFAARTLTQVSKSAWGIQDPMNAVFSPDGKWLAFMGITNNAWNVFL 111

Query: 419 YSIDLNGRNETLINTPAYAS--DPQWVG 444
           + +  + +   + N+       DP++  
Sbjct: 112 WQVGSSSQPVNMTNSTGQTRNEDPKFSA 139


>gi|253564518|ref|ZP_04841975.1| dipeptidyl peptidase IV [Bacteroides sp. 3_2_5]
 gi|251948294|gb|EES88576.1| dipeptidyl peptidase IV [Bacteroides sp. 3_2_5]
 gi|301161157|emb|CBW20695.1| putative exported dipeptidyl peptidase IV [Bacteroides fragilis
           638R]
          Length = 719

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 80/194 (41%), Gaps = 27/194 (13%)

Query: 264 RFSSNGKRA-LISVQKDEA-MDIYSVDLQSNATERLTNTLFIN-----ISAS----YSP- 311
            ++ + K   LI + +D+    +   D+++     LT TLF       +       + P 
Sbjct: 276 SWAPDEKSLYLIELNRDQNHAKLCRYDVETGE---LTATLFEEKSDKYVEPQDPIIFLPW 332

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL----IAFTKFS 367
           D+S+ +++S ++G   LY+  +NG   +++++         V           IA T+FS
Sbjct: 333 DNSKFIYQSQKDGFSHLYLYDTNGRQIRQLTEGD--WLVKEVLGFDTKKKEIIIASTEFS 390

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGR 426
             +  +  +         L     + +   SPSGR LI  +         +  ID+ +G+
Sbjct: 391 PLQDNLFRLDTKTGTRTPLGSAEGVHSGQLSPSGRYLI-DQYNSPTVPRSINIIDVQSGK 449

Query: 427 NETLINTPAYASDP 440
           +  L+     A+DP
Sbjct: 450 SVNLLT----AADP 459


>gi|224092584|ref|XP_002309672.1| predicted protein [Populus trichocarpa]
 gi|222855648|gb|EEE93195.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 68/237 (28%), Gaps = 27/237 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G     L       +    FSP    +  ++ D      V L  T ++            
Sbjct: 413 GKRSYTLFQGHSGPVHSATFSPLGDFILSSSADT----TVRLWSTELNANLVCYKGHNYP 468

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G     S   D    I+S+D       R+      ++    +  + + I  
Sbjct: 469 VWDVQFSPVGHYFA-SASHDRTARIWSMDRI--QPLRIMAGHLSDVDCVQWHANCNYIAT 525

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     + + +      +  RI     +       SP G  +A     G      +M  
Sbjct: 526 GSS---DKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMASGDEDGS-----IMMW 577

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFS------RKKDGDTGSKLYSIDLNGRNET 429
           D S  R +       +  WS     L FS           D   KL+ +  + +   
Sbjct: 578 DLSSGRCISPMMGHHSCVWS-----LAFSCESSLLASGSADCTVKLWDVTTSTKPAK 629



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 7/121 (5%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            ++ +   V     S     +  +   D      +       +   ++  N   +A  + 
Sbjct: 469 VWDVQFSPVGHYFASASHDRTARIWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSS 528

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D      V L D +     +     RSMIL+   S +G+    S  +D ++ ++  DL S
Sbjct: 529 DK----TVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRYMA-SGDEDGSIMMW--DLSS 581

Query: 292 N 292
            
Sbjct: 582 G 582


>gi|297157102|gb|ADI06814.1| putative WD-40 repeat protein [Streptomyces bingchenggensis BCW-1]
          Length = 1293

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 76/212 (35%), Gaps = 43/212 (20%)

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--------------LAPRFS 266
            P+ + V        + L ++ + +R     +  G   S+                A    
Sbjct: 1050 PDGRTVL-VYRHLSEALELWGVHSRTRVTRRAPGLAESVDVGGSGDFWMAFPDSSALAVR 1108

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             +G+  + +  +          L S   ++LT +     + +Y PD  Q+   +D  G+ 
Sbjct: 1109 PDGRMVITASGQ-------RFTLPSGRPDQLTRSQDPVYALAYRPDGEQLALGTD-SGQV 1160

Query: 327  QLYVMQSNGSDQKRI-----SQDKEASYFDP-----VWSPQGDLIAFTKFSGEKFAIGVM 376
             L+    +GS ++R+     +   E            +SP G ++A     G+K  + + 
Sbjct: 1161 TLW----DGSAERRLGVVAGTLTGEGRESAEPVKALAYSPDGKILAVA---GDKGTLRLW 1213

Query: 377  KKDGS---QERLLVEDSNLQAPTWSPSGRSLI 405
                       LL    N++A  +S  GR+L+
Sbjct: 1214 DTASGLPLGSVLLTAGDNIRALAFSEDGRTLL 1245



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 43/254 (16%), Positives = 82/254 (32%), Gaps = 38/254 (14%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
               G     L     DG    Y    RD      R     ++VA             ++ 
Sbjct: 967  GHKGQYCLPLMAFSADGRTFAYGFGERDAANGRAR----AERVAVWDVHKGRKTADLVLT 1022

Query: 244  T----RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--- 296
                         +    +   +   + +G+  L+     EA++++ V  ++  T R   
Sbjct: 1023 PKGADESGGDSIALTEGEAGADSIALTPDGRTVLVYRHLSEALELWGVHSRTRVTRRAPG 1082

Query: 297  LTNTLFINISASYS---PDSSQIVFESDREGKEQL----YVMQSNGSDQKRISQDKEASY 349
            L  ++ +  S  +    PDSS +      +G+  +               ++++ ++   
Sbjct: 1083 LAESVDVGGSGDFWMAFPDSSALA--VRPDGRMVITASGQRFTLPSGRPDQLTRSQD-PV 1139

Query: 350  FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--------VEDSNLQAP----TW 397
            +   + P G+ +A    SG+     V   DGS ER L         E      P     +
Sbjct: 1140 YALAYRPDGEQLALGTDSGQ-----VTLWDGSAERRLGVVAGTLTGEGRESAEPVKALAY 1194

Query: 398  SPSGRSLIFSRKKD 411
            SP G+ L  +  K 
Sbjct: 1195 SPDGKILAVAGDKG 1208



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 74/244 (30%), Gaps = 39/244 (15%)

Query: 194 CVMDRDGANIRYLT-PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            +   D  N R L      + ++EP  S +  ++A  +  DE  +       RI   P  
Sbjct: 719 WLRLWDIRNRRRLLFQRSSETMWEPTLSMDGGRIALCSDQDELEVWDVRAHRRIRTLPAV 778

Query: 253 IGNFR----SMILAPRF--SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +               F  + +G+R LIS  K          L S       +   +   
Sbjct: 779 VSRLGCGSAEDTDGAEFLLTPDGRRLLISTAKGVRGWE----LASGKELPGISHSGLGYL 834

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  S D   +    D    +++ V         R+       Y  P+    G  ++  + 
Sbjct: 835 A-LSRDGRLLAATDD----QEILVW--------RLDSPGRPVYRHPLA---GRRVSGLQL 878

Query: 367 SGEKFAIGVMKKDGS---QERLL---VEDSNLQAPT------WSPSGRSLIFSRKKDGDT 414
             +   I   + DG+     R L      ++   P       + P G  +   R   G  
Sbjct: 879 DADHGVIRYQEGDGTASDAVRTLYLGSATTSEWGPKRDGEALFRPDGSLIAEVRTSGGRE 938

Query: 415 GSKL 418
             +L
Sbjct: 939 RIEL 942


>gi|302538305|ref|ZP_07290647.1| conserved hypothetical protein [Streptomyces sp. C]
 gi|302447200|gb|EFL19016.1| conserved hypothetical protein [Streptomyces sp. C]
          Length = 340

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 85/270 (31%), Gaps = 26/270 (9%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR--LWDVKDRK 137
           +   +            +   +   + G     TG  ++  K  ++  +R  + D    K
Sbjct: 73  SPPPRPDAPGGPRTASGVNCLRFHAAAG-----TGICLRADKGGVQESYRAVVLD-AALK 126

Query: 138 QIIGKKFFSSPASWR--KIAHTISDDIYQSITGEKG-DFNSRILFVSESVVSGIIKNSLC 194
           ++        P   R     H  +  ++       G DF++R   +              
Sbjct: 127 EVSAHPLAGIPTRARVSPGGHLAAWTVFVGGDSYAGTDFSTRTSLLDLRTGKLDASLEDF 186

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            + +DG        + D   +   F+ + +K  YAT        +     R D A + + 
Sbjct: 187 TVLKDG----REYRNADVNFWGVTFTAD-EKAFYATLATGGRTYL----VRGDLAARTVT 237

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNATERLTNTLFINISASY 309
             R  +  P  S +G R +   +           +Y +DL S     L     ++    +
Sbjct: 238 TLRENLECPSLSPDGTRLVFKKRVPGLPAEAPWRLYVLDLASMRETPLAEERSVDDQVVW 297

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             D   +V+    +    LY + ++GS   
Sbjct: 298 -RDDRTLVYSLPGDFGADLYTLPADGSGAP 326



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 63/196 (32%), Gaps = 27/196 (13%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREG-- 324
           G    +   K    + Y   +   A + ++      I   A  SP      +     G  
Sbjct: 100 GTGICLRADKGGVQESYRAVVLDAALKEVSAHPLAGIPTRARVSPGGHLAAWTVFVGGDS 159

Query: 325 ------KEQLYVMQSNGSDQ------------KRISQDKEASYFDPVWSPQGDLIAFTKF 366
                   +  ++                    R  ++ + +++   ++        T  
Sbjct: 160 YAGTDFSTRTSLLDLRTGKLDASLEDFTVLKDGREYRNADVNFWGVTFTADEKAFYATLA 219

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSIDL 423
           +G +    +++ D +   +     NL+ P+ SP G  L+F ++  G   +   +LY +DL
Sbjct: 220 TGGRT--YLVRGDLAARTVTTLRENLECPSLSPDGTRLVFKKRVPGLPAEAPWRLYVLDL 277

Query: 424 NGRNETLINTPAYASD 439
               ET +       D
Sbjct: 278 ASMRETPLAEERSVDD 293


>gi|320034358|gb|EFW16303.1| secreted dipeptidyl peptidase [Coccidioides posadasii str.
           Silveira]
          Length = 723

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 49/148 (33%), Gaps = 30/148 (20%)

Query: 310 SPDSSQIVFESD------------------REGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           SPD   + F S                    +G  +   + +         +    +   
Sbjct: 236 SPDGQSVAFMSKAPELPKANLTTSYIFVGPHDGSAEFTPINARDGPATP--EGVRGASTS 293

Query: 352 PVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAP---TWSPSGRS 403
           P +SP    IA+ +  GE +      I V     S     V +   ++P    W+ +GR+
Sbjct: 294 PKFSPDSKKIAYVQMHGENYESDRNIIYVATLGSSPSIRAVAEDWDRSPDSIQWTRNGRT 353

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           L F+ +  G    KL+S+       T  
Sbjct: 354 LYFTAEDRGTV--KLFSVSATAGRRTRP 379



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 45/145 (31%), Gaps = 24/145 (16%)

Query: 219 FSPNQQKVAYAT---------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            SP+ Q VA+ +               +                  P      R    +P
Sbjct: 235 ISPDGQSVAFMSKAPELPKANLTTSYIFVGPHDGSAEFTPINARDGPATPEGVRGASTSP 294

Query: 264 RFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISA---SYSPDSSQ 315
           +FS + K+        E  +     IY   L S+ + R       + S     ++ +   
Sbjct: 295 KFSPDSKKIAYVQMHGENYESDRNIIYVATLGSSPSIR-AVAEDWDRSPDSIQWTRNGRT 353

Query: 316 IVFESDREGKEQLYVMQSNGSDQKR 340
           + F ++  G  +L+ + +    + R
Sbjct: 354 LYFTAEDRGTVKLFSVSATAGRRTR 378



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 48/158 (30%), Gaps = 31/158 (19%)

Query: 266 SSNGKRALISVQK------------------DEAMDIYSVDLQSNATERLTNTLFINISA 307
           S +G+      +                   D + +   ++ +             + S 
Sbjct: 236 SPDGQSVAFMSKAPELPKANLTTSYIFVGPHDGSAEFTPINARDGPATP-EGVRGASTSP 294

Query: 308 SYSPDSSQIVFE--------SDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQG 358
            +SPDS +I +         SDR     +YV     S   R +++D + S     W+  G
Sbjct: 295 KFSPDSKKIAYVQMHGENYESDR---NIIYVATLGSSPSIRAVAEDWDRSPDSIQWTRNG 351

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             + FT        +  +     +        N+ + +
Sbjct: 352 RTLYFTAEDRGTVKLFSVSATAGRRTRPRAMRNVGSVS 389


>gi|296415075|ref|XP_002837217.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633078|emb|CAZ81408.1| unnamed protein product [Tuber melanosporum]
          Length = 569

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 71/203 (34%), Gaps = 17/203 (8%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSN 268
            + ++   RFS + + VA        I  V           + +     + + +  FS +
Sbjct: 258 HNSVVCCVRFSQDGKYVATGCNRSAQIFDVKSGTMVSRLQDETVDRDGDLYIRSVCFSPD 317

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQ 327
           G+    +  +D+ + ++  D+Q+   ++  +    +  S  ++ +   I   S   G   
Sbjct: 318 GRYLA-TGAEDKQIRVW--DIQNRTIKQTFHGHEQDIYSLDFARNGRHIASGS---GDRT 371

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + V       Q  ++   E        SP G  +A          + V           +
Sbjct: 372 VRVWDIESG-QNVLTLSIEDGVTTVAISPDGRYVAAGSLDKS---VRVWDAQTGYLVERL 427

Query: 388 EDS-----NLQAPTWSPSGRSLI 405
           E +     ++ +  ++P+GR L+
Sbjct: 428 EGAEGHKDSVYSVAFAPNGRDLV 450



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 76/222 (34%), Gaps = 24/222 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    D  +    FSP+ + +A    D     ++ + D +     +        I +  
Sbjct: 300 TVDRDGDLYIRSVCFSPDGRYLATGAEDK----QIRVWDIQNRTIKQTFHGHEQDIYSLD 355

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F+ NG+    S   D  + ++  D++S       +      + + SPD   +   S    
Sbjct: 356 FARNGRHIA-SGSGDRTVRVW--DIESGQNVLTLSIEDGVTTVAISPDGRYVAAGSL--- 409

Query: 325 KEQLYVMQS-NGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAI----GV 375
            + + V  +  G   +R+  ++  + S +   ++P G  +         + + +    G+
Sbjct: 410 DKSVRVWDAQTGYLVERLEGAEGHKDSVYSVAFAPNGRDLVSGSLDKTIKMWELSAARGL 469

Query: 376 MKKDGSQE---RLLVEDSNLQAPTWS--PSGRSLIFSRKKDG 412
           M   G+         E       + +  P G  ++   K  G
Sbjct: 470 MPGGGTSRGKCVKTFEGHKDFVLSVALTPDGNWVLSGSKDRG 511


>gi|312194565|ref|YP_004014626.1| serine/threonine protein kinase [Frankia sp. EuI1c]
 gi|311225901|gb|ADP78756.1| serine/threonine protein kinase [Frankia sp. EuI1c]
          Length = 771

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 69/198 (34%), Gaps = 22/198 (11%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRALISV 276
           P+ + +A ++ D      VYL +      P      +      + +   S +G+    + 
Sbjct: 473 PDSRTLAASSGDF-----VYLWNITDPAHPAEVIPVLTGSTDRVSSVAMSHDGRTLA-AG 526

Query: 277 QKDEAMDIYSV--DLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLY-VMQ 332
            +D ++ ++++    Q     +L T+T     S   SP+   +V  SD +G   ++ +  
Sbjct: 527 SRDGSVRLWNLTNPAQPTPLGQLLTDTTEPVTSVVLSPNGRTLVAGSD-DGTVHVWDITD 585

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-----GSQERLLV 387
              +           +      SP G ++A     G      +   D     G+   + V
Sbjct: 586 PAHATAVTTLTGPSNTVTSVAISPNGRILAAGSVGGTVHLWSITDPDHPALLGNPLSVPV 645

Query: 388 EDSNLQAPTWSPSGRSLI 405
               + +   SP   +L 
Sbjct: 646 --GGVTSVVISPDSHTLA 661



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 65/215 (30%), Gaps = 10/215 (4%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +     S + + +A  + D    L       +     + + +    + +   
Sbjct: 503 VLTGSTDRVSSVAMSHDGRTLAAGSRDGSVRLWNLTNPAQPTPLGQLLTDTTEPVTSVVL 562

Query: 266 SSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           S NG+  + +   D  + ++ +     + A   LT       S + SP+   +   S   
Sbjct: 563 SPNGRTLV-AGSDDGTVHVWDITDPAHATAVTTLTGPSNTVTSVAISPNGRILAAGS-VG 620

Query: 324 GKEQLY-VMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           G   L+ +   +                   V SP    +A      E     V      
Sbjct: 621 GTVHLWSITDPDHPALLGNPLSVPVGGVTSVVISPDSHTLAAGGDDSEVHLWNVTDPAHP 680

Query: 382 QE--RLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD 413
               +L+   D  + A   S  GR+L  +  +DG 
Sbjct: 681 APLGQLVAGLDEGVTAVAISRDGRTLA-AGSRDGT 714


>gi|47225915|emb|CAF98395.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 204

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 66/207 (31%), Gaps = 21/207 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A  ++  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 12  AFSPDSKHIATGSHHGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 66

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 67  IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 122

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                    +   +  +SP       T F        V   D      +    + Q   W
Sbjct: 123 LAGTLSGHGSWVLNVAFSPDD-----THFVSSSSDKSVKVWDAGSRACINTFFDHQDQVW 177

Query: 398 S----PSGRSLIFSRKKDGDTGSKLYS 420
           S     +G  +I       D    +Y 
Sbjct: 178 SVKYNSNGSKII---SAGDDRAIHIYD 201



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 69/200 (34%), Gaps = 18/200 (9%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S+ + +G     + +   +     Y   +R + +    +SP+ + +A    D      + 
Sbjct: 17  SKHIATGSHHGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDG----IIN 72

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERL 297
           + D    +    +      I +  FS +  + L++   D  + IY V   +L       L
Sbjct: 73  IFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKIYDVQHANLAGT----L 127

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +      ++ ++SPD +           + + V  +          D +   +   ++  
Sbjct: 128 SGHGSWVLNVAFSPDDTHF---VSSSSDKSVKVWDAGSRACINTFFDHQDQVWSVKYNSN 184

Query: 358 GDLIAFTKFSGEKFAIGVMK 377
           G  I     +G+  AI +  
Sbjct: 185 GSKII---SAGDDRAIHIYD 201



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 8/142 (5%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVF 318
             +  FS + K    +      ++I+ V+        L T   FI +S +YSPD   +  
Sbjct: 8   AWSVAFSPDSKHIA-TGSHHGKVNIFGVE-SGKKEYSLDTRGKFI-LSIAYSPDGKYLA- 63

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                    + +            +          +SP   L+      G      V   
Sbjct: 64  --SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA 121

Query: 379 DGSQERLLVEDSNLQAPTWSPS 400
           + +   L    S +    +SP 
Sbjct: 122 NLAG-TLSGHGSWVLNVAFSPD 142


>gi|311255440|ref|XP_003126226.1| PREDICTED: aladin-like isoform 1 [Sus scrofa]
          Length = 546

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  D  D +RVY  ++ I   P      +  + A  +       L    
Sbjct: 158 AWHPHTNKFAVALLD--DSIRVYNANSTI--VPSLKHRLQRNVAALAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIL 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  +  T  S   F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVLATTPS-AVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGSRLLFT 346


>gi|114644486|ref|XP_522403.2| PREDICTED: aladin isoform 4 [Pan troglodytes]
          Length = 546

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  DD     V + +      P      +  + +  +       L    
Sbjct: 158 AWHPHTNKFAVALLDD----SVRVYNASSTIVPSLKHRLQRNVASLAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIR 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  I  T  S   F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKILATTPS-AVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGSRLLFT 346


>gi|47208646|emb|CAG12246.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 340

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 70/210 (33%), Gaps = 27/210 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
              +       ++  +FS +  K+A  +   +D   +           K +         
Sbjct: 38  PTQILTEHCNEVWFCKFSNDGTKLATGS---KDTTVIIWQVEPESHQLKLLRTLEGHAYG 94

Query: 263 P---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIV 317
                +S +    LI+   D+  +++  ++Q+       +    +   S +++PD  + V
Sbjct: 95  VSYLAWSPD-DVYLIACGPDDCSELWLWNVQTGELRTKMSQSHEDSLTSVAWNPDGKRFV 153

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFT----KFSGEKFA 372
               R    Q Y    +G+    +    E      +W    G  +  +    +  G  F 
Sbjct: 154 TGGQRG---QFYQCDLDGN----LLDSWEGVRVQCLWCLSDGRTVLASDTHQRIRGYNFE 206

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                 D +   ++ ED  + + T S +GR
Sbjct: 207 ------DLTDRNIVQEDHPIMSFTVSKNGR 230


>gi|189502647|ref|YP_001958364.1| hypothetical protein Aasi_1325 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189498088|gb|ACE06635.1| hypothetical protein Aasi_1325 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 656

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 80/272 (29%), Gaps = 56/272 (20%)

Query: 201 ANIRYLTPSRDQIL--FEPRFSPNQQKVAYA-------------TYDDEDILRVYLMDTR 245
            N R L    +Q    + P  + +QQ + +                  +D    + + T 
Sbjct: 171 FNPRKLPTPLNQFASQYFPVLTVDQQTILFTALVNYAGRYRENIYISYKDKFGKWTVPTS 230

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLT------ 298
           I      I +          S++ +  + +   ++    +  + +        T      
Sbjct: 231 ISEQINGITSNEGTC---TISADKRTLVFTSCSREGNYGVCDLYISYRKGTEWTKPQNLG 287

Query: 299 ---NTLFINISASYSPDSSQIVFESDREGK---EQLY--VMQSNGSDQKRISQDK----E 346
              N+       S S D   + F S+R+G      ++   +Q++G   K ++       +
Sbjct: 288 PHINSKGWQSQPSLSADGKILYFVSERKGNYGKNDIWKSTLQTDGQWSKPVNLGPVINSK 347

Query: 347 ASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLVEDSNLQAP-------- 395
           A    P   P G  + F          F I        +     E  NL  P        
Sbjct: 348 AREISPFIHPNGQTLFFASNRTPSMGGFDIYYSNLVNGE---WTEPINLGYPINNHKDQA 404

Query: 396 --TWSPSGRSLIFSRKKDGDTG---SKLYSID 422
               +  G+   ++  K  D     S +Y  D
Sbjct: 405 SIFITADGKKGYYADGKRKDCNYHKSYIYEFD 436


>gi|311258335|ref|XP_003127564.1| PREDICTED: WD repeat-containing protein 8-like [Sus scrofa]
          Length = 460

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 40/258 (15%), Positives = 89/258 (34%), Gaps = 20/258 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D     I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDASTLQILQLYTCLDQI-QHIEWSADSLFIL-CALYRRGLVQVWSLEQPDWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACQQGITF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ ++ + +   +     R  +          W+P G ++A    +  
Sbjct: 142 TRDGRYLALAERRDCRDHVSIFVCSDWQLLRHFETDTQDLAGIEWAPNGCVLA-AWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           ++ I +   DG   RLL           +++  WSPS + L               +  L
Sbjct: 201 EYKILLYSLDG---RLLSTYCAYEWSLGIKSVAWSPSSQFLAVGSYDGKVRVLNHVTWKL 257

Query: 424 NGRNETLINTPAYASDPQ 441
                  +  PA  S P 
Sbjct: 258 ----LAELGHPAAVSSPS 271



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 51/157 (32%), Gaps = 9/157 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK     VQ      +   D  +    +L   L       +S DS  I+    R G
Sbjct: 16  FSPDGKYLASCVQ----YRLVVRDASTLQILQLYTCLDQIQHIEWSADSLFILCALYRRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++      K    +  A      WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQPDWHCK--IDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSVS 127

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +       Q  T++  GR L  + ++D      ++ 
Sbjct: 128 YIKYPKACQQGITFTRDGRYLALAERRDCRDHVSIFV 164


>gi|226294683|gb|EEH50103.1| transcriptional repressor TUP1 [Paracoccidioides brasiliensis Pb18]
          Length = 583

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 50/328 (15%), Positives = 117/328 (35%), Gaps = 56/328 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G +R     +++DV+  + +   +                DD   S+  ++GD 
Sbjct: 282 GKFVATGCNR---SAQIFDVQSGQLVTSLQ----------------DD---SVLDKEGDL 319

Query: 174 NSRILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             R +  S       +G     + V D     I+++    +Q ++   F+ N + +A  +
Sbjct: 320 YIRSVCFSPDGRYLATGAEDKQIRVWDIQKRTIKHIFSGHEQDIYSLDFARNGRYIASGS 379

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D      V L D  +D   + I +    +     S +G+    +   D+++ ++  D  
Sbjct: 380 GDK----TVRLWDI-VDGKQELILSIEDGVTTVAISPDGRFVA-AGSLDKSVRVW--DTT 431

Query: 291 SNAT-ERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN----------GS 336
           +    ERL N    +    S +++P+   +V  S  +   +L+ +             G 
Sbjct: 432 TGYLIERLENPDGHMDSVYSVAFAPNGRDLVSGSL-DKTIKLWELTPPRGMVPGSGPKGG 490

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
              R  +  +        +P G  +           +          +++++       +
Sbjct: 491 KCVRTFEGHKDFVLSVCLTPDGRWVMSGSKDRG---VQFWDPATGNAQMMLQGHKNSVIS 547

Query: 397 WSPS--GRSLIFSRKKDGDTGSKLYSID 422
            +PS  G   +F+    GD  ++++S  
Sbjct: 548 VAPSPVGN--LFATG-SGDMRARIWSYS 572



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 17/158 (10%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA------- 307
             S++   RFS++GK                 D+QS      L +   ++          
Sbjct: 269 HDSVVCCVRFSNDGKFVA----TGCNRSAQIFDVQSGQLVTSLQDDSVLDKEGDLYIRSV 324

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD   +   ++    +Q+ V        K I    E   +   ++  G  IA     
Sbjct: 325 CFSPDGRYLATGAE---DKQIRVWDIQKRTIKHIFSGHEQDIYSLDFARNGRYIASGSGD 381

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  ++  DG QE +L  +  +     SP GR + 
Sbjct: 382 KTVRLWDIV--DGKQELILSIEDGVTTVAISPDGRFVA 417


>gi|194880857|ref|XP_001974570.1| GG21819 [Drosophila erecta]
 gi|190657757|gb|EDV54970.1| GG21819 [Drosophila erecta]
          Length = 343

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/213 (12%), Positives = 72/213 (33%), Gaps = 24/213 (11%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  I+         +   +FSP+ +++  ++ D      + L D    +  + +      
Sbjct: 44  GYAIKSSLLGHSGCVTAVKFSPDGERLVSSSVDM----LLKLWDVSATKCIQSLAGHEYG 99

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYSPDSSQI 316
           +    +S+ G   L S   D+++ ++     + +    + L      + S  ++P ++ +
Sbjct: 100 VNDVAWSAAG--LLASCSDDKSVRLW----DTRSQLCVKVLEGHCSFSFSCCFNPQANLL 153

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              S       + +         +I    +       ++  G     + F G    + + 
Sbjct: 154 ATTSF---DNTVRLWDVRTGKTLKIVTAHQDPISAVDFNSDGSSFVTSSFDG---LVRLW 207

Query: 377 KKDGSQERLLVEDSNLQAPT----WSPSGRSLI 405
                     + D +   P     +SP+GR ++
Sbjct: 208 DSSTGHVLKTLVDVD-NIPVGYVKFSPNGRYIL 239


>gi|281421188|ref|ZP_06252187.1| OmpA family protein [Prevotella copri DSM 18205]
 gi|281404723|gb|EFB35403.1| OmpA family protein [Prevotella copri DSM 18205]
          Length = 660

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 74/230 (32%), Gaps = 50/230 (21%)

Query: 253 IGNFRSMILAPRF-SSNGKRALISVQKDEAMDIYSVDLQS-------------------- 291
           + N R    +P F S +  +   +  ++EA      DL                      
Sbjct: 159 VFNSRRDDYSPMFLSDDYSQLYFTSTRNEAQGS---DLNGVTGTKSADIFFSEKNDKGKW 215

Query: 292 NATERLTNTLFINIS---ASYSPDSSQIV---FESDREGKEQLYVMQSNGSDQK------ 339
           +  E +   L  +       ++PD  Q+      +D        ++ SN SD        
Sbjct: 216 SKPEAIGTGLNTDYEEGACCFTPDGKQMYLTQCTTDPTSPRLAQIVTSNRSDAAWSKPTN 275

Query: 340 -RISQDKEASYFDPVWSPQGDLIAFTKF---SGEKFAIGVMKKD----GSQERL---LVE 388
             IS+D  + +  P  SP G+ + F            I  ++      G  E L   +  
Sbjct: 276 LEISKDTLSCFAHPAISPDGEWLYFVSDMPGGKGGLDIWRVRITPAGLGGVENLGEPINT 335

Query: 389 DSNLQAPTWSPSGRSLIFSRKKD-GDTGSKLYSIDLNG-RNETLINTPAY 436
             +   PT+ P+G    FS     G  G  +Y   +N    +  +  P Y
Sbjct: 336 PGDEMFPTFRPNGDF-YFSSNGHVGMGGLDIYIAKVNSITRKYELTHPGY 384



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 55/183 (30%), Gaps = 40/183 (21%)

Query: 299 NTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-------------- 343
           N+   + S  + S D SQ+ F S R   +   +    G+    I                
Sbjct: 161 NSRRDDYSPMFLSDDYSQLYFTSTRNEAQGSDLNGVTGTKSADIFFSEKNDKGKWSKPEA 220

Query: 344 -----DKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQ--- 393
                + +       ++P G  +  T+         +  +      +    + +NL+   
Sbjct: 221 IGTGLNTDYEEGACCFTPDGKQMYLTQCTTDPTSPRLAQIVTSNRSDAAWSKPTNLEISK 280

Query: 394 -------APTWSPSGRSLIFSRK-KDGDTGSKLYSIDLN----GRNETL---INTPAYAS 438
                   P  SP G  L F      G  G  ++ + +     G  E L   INTP    
Sbjct: 281 DTLSCFAHPAISPDGEWLYFVSDMPGGKGGLDIWRVRITPAGLGGVENLGEPINTPGDEM 340

Query: 439 DPQ 441
            P 
Sbjct: 341 FPT 343



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 47/134 (35%), Gaps = 21/134 (15%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRID----RAPKRIG---NFRSMILAPRFSSN 268
            P  SP+ + + + +        + +   RI        + +G   N     + P F  N
Sbjct: 288 HPAISPDGEWLYFVSDMPGGKGGLDIWRVRITPAGLGGVENLGEPINTPGDEMFPTFRPN 347

Query: 269 GKRALISVQKD---EAMDIYSVDLQSNATER-LT------NTLFINISASYSPDSSQIVF 318
           G     S         +DIY   + S   +  LT      NT   +   ++    +Q  F
Sbjct: 348 GDF-YFSSNGHVGMGGLDIYIAKVNSITRKYELTHPGYPLNTEADDFGMTFEGLHNQGFF 406

Query: 319 ESDRE---GKEQLY 329
            S+R+   G + +Y
Sbjct: 407 CSNRKDGRGYDHIY 420


>gi|195431226|ref|XP_002063648.1| GK19416 [Drosophila willistoni]
 gi|194159733|gb|EDW74634.1| GK19416 [Drosophila willistoni]
          Length = 346

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 71/207 (34%), Gaps = 5/207 (2%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           YQ     +   + +       + S    +SL + D    N           + +  +SP 
Sbjct: 48  YQLPGHNRAVTSVKFSASGNFMASASSDSSLKIWDMHAVNCNLTLTGHLMGINDVAWSPE 107

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
               ++      D   + L D+R  +  + +   ++ + A RF   G     S   DE++
Sbjct: 108 SGG-SHILGSCSDDQTIRLWDSRNGQCFRTLHKHKAFVFACRFHPQGNLMA-SSSFDESV 165

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++ +  Q    + ++       S  ++ D S  V  S  +G  +++    N    K + 
Sbjct: 166 CLWDL-RQGKCLKSVSAHWDPITSVDFNCDGSLFV-TSSFDGLVRIWDTS-NAQVVKSLI 222

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGE 369
            D         +SP G  I  +  +  
Sbjct: 223 DDDNTPVGYVKFSPNGKYILASTLNNT 249



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 70/217 (32%), Gaps = 22/217 (10%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  + Y  P  ++ +   +FS +   +A A+ D      + + D         +      
Sbjct: 43  GYLLMYQLPGHNRAVTSVKFSASGNFMASASSDS----SLKIWDMHAVNCNLTLTGHLMG 98

Query: 260 ILAPRFSSN--GKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQI 316
           I    +S    G   L S   D+ + ++  D ++    R L        +  + P  + +
Sbjct: 99  INDVAWSPESGGSHILGSCSDDQTIRLW--DSRNGQCFRTLHKHKAFVFACRFHPQGNLM 156

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              S     E + +         +             ++  G L   + F G    I   
Sbjct: 157 ASSSF---DESVCLWDLRQGKCLKSVSAHWDPITSVDFNCDGSLFVTSSFDG-LVRIW-- 210

Query: 377 KKDGSQERLLVED-SNLQAPT----WSPSGRSLIFSR 408
             D S  +++     +   P     +SP+G+ ++ S 
Sbjct: 211 --DTSNAQVVKSLIDDDNTPVGYVKFSPNGKYILAST 245


>gi|18858057|ref|NP_572557.1| CG16892 [Drosophila melanogaster]
 gi|7291046|gb|AAF46484.1| CG16892 [Drosophila melanogaster]
 gi|15292227|gb|AAK93382.1| LD42637p [Drosophila melanogaster]
 gi|220955996|gb|ACL90541.1| CG16892-PA [synthetic construct]
 gi|299758530|gb|ADJ37240.1| MIP17857p [Drosophila melanogaster]
          Length = 466

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 15/184 (8%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS--------NGKRALISVQKDEAMDIYS 286
           D++R+Y   +    A       ++ I    +            ++ L   + D  + +  
Sbjct: 159 DVVRIYTKSSSATTATVLKSPSQTQITCMAWRPLCASEIVIGCRQGLCFWEVDSTLHLGR 218

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            +  S    +  N L I  S  ++ D +Q+   S   G   + + Q +    + + +   
Sbjct: 219 TNAPS-EIFKYPNNLPI-TSMQWNKDGTQLATASI--GDRSIIIWQPDTGMMQPLKRLGP 274

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
                  WSP  D + F       F +    +  + ER +      +Q   WSP GR L+
Sbjct: 275 PGSLLK-WSPDNDWL-FAATVDRVFRVWNCHQQWTTERWVCGPGGYVQTACWSPCGRFLL 332

Query: 406 FSRK 409
           F   
Sbjct: 333 FVSS 336


>gi|42558924|sp|Q8J1M3|DPP5_ARTBE RecName: Full=Dipeptidyl-peptidase 5; AltName:
           Full=Dipeptidyl-peptidase V; Short=DPP V; Short=DppV;
           AltName: Allergen=Tri m 4; Flags: Precursor
 gi|23894232|emb|CAD23611.1| tri m 4 allergen [Arthroderma benhamiae]
 gi|62766608|gb|AAX99412.1| protease DPPV [Trichophyton mentagrophytes]
          Length = 726

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 33/186 (17%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-------YSPDSSQIVFESDREG 324
           A+ S    +  D YS D +     +                    S D   + F S    
Sbjct: 188 AVFSGSLTKNGDKYSFDGKLKNLVQPVKYAESPYPPFGGSGDYDLSSDGKTVAFMSKAPE 247

Query: 325 KEQ-------LYVMQSNGS---------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             +       ++++  +GS         +  R  Q  E +   PV+SP G  IA+ + + 
Sbjct: 248 LPKANLTTSYIFLVPHDGSRVAEPINKRNGPRTPQGIEGASSSPVFSPDGKRIAYLQMAT 307

Query: 369 EKFA-----IGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYS 420
           + +      I + +   ++    +  S  ++P    WS  GR+L  + +       KL++
Sbjct: 308 KNYESDRRVIHIAEVGSNKPVQRIASSWDRSPEAVKWSSDGRTLYVTAEDH--ATGKLFT 365

Query: 421 IDLNGR 426
           +  + R
Sbjct: 366 LPADAR 371



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 73/237 (30%), Gaps = 37/237 (15%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S  IY  +      +++ +     +V SG +  +      DG     + P +      P 
Sbjct: 166 SARIYDGLFVRH--WDTYVGTQFNAVFSGSLTKNGDKYSFDGKLKNLVQPVKYAESPYPP 223

Query: 219 F--------SPNQQKVAYAT---------------YDDEDILRVYLMDTRIDRAPKRIGN 255
           F        S + + VA+ +               +                  P+    
Sbjct: 224 FGGSGDYDLSSDGKTVAFMSKAPELPKANLTTSYIFLVPHDGSRVAEPINKRNGPRTPQG 283

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISAS-- 308
                 +P FS +GKR        +  +     I+  ++ SN   +   +   + S    
Sbjct: 284 IEGASSSPVFSPDGKRIAYLQMATKNYESDRRVIHIAEVGSNKPVQRIAS-SWDRSPEAV 342

Query: 309 -YSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLI 361
            +S D   +   ++     +L+ + ++  D      +  D   S F  + S +  LI
Sbjct: 343 KWSSDGRTLYVTAEDHATGKLFTLPADARDNHKPSVVKHDGSVSSFYFIGSSKSVLI 399


>gi|295838287|ref|ZP_06825220.1| conserved hypothetical protein [Streptomyces sp. SPB74]
 gi|295826951|gb|EDY46578.2| conserved hypothetical protein [Streptomyces sp. SPB74]
          Length = 1171

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 64/183 (34%), Gaps = 33/183 (18%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISAS- 308
           +R+   R+ +  PRFS +G        +    +I+  ++       +LT+    +     
Sbjct: 52  RRLTADRTKLSHPRFSPDGAHLAFVSWRSLDPEIHLAEVAGDTPVRQLTHWAGRDTRVCG 111

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SP         D EG+  +  +    S  +  S    A       SP G L       G
Sbjct: 112 WSPP--------DAEGRSDILAVS---SQAQPFSYFSWAYKVPTDGSPGGPL-----PWG 155

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY------SID 422
              A+     DG +  LL+  +    P          + R + G TG +L+        D
Sbjct: 156 PVAALAQRGHDGEERTLLLTGTPPHDPA--------AWKRYRGGATG-RLWLHGERLLAD 206

Query: 423 LNG 425
           L+G
Sbjct: 207 LDG 209



 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 69/225 (30%), Gaps = 25/225 (11%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSS---NG 269
           L  PRFSP+   +A+ ++   D   ++L +   D   +++ ++         +S     G
Sbjct: 61  LSHPRFSPDGAHLAFVSWRSLDP-EIHLAEVAGDTPVRQLTHWAGRDTRVCGWSPPDAEG 119

Query: 270 KR--ALISVQK---DEAMDIYSVDLQSNATERLTNTLFINISASYSPDS--SQIVFESDR 322
           +     +S Q          Y V    +    L     +   A    D     ++     
Sbjct: 120 RSDILAVSSQAQPFSYFSWAYKVPTDGSPGGPLPWGP-VAALAQRGHDGEERTLLLTGTP 178

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-----GDLIAFTKFSGEKFAIGVMK 377
                 +  +  G    R+    E    D           GD +AF         +   +
Sbjct: 179 PHDPAAWK-RYRGGATGRLWLHGERLLADLDGHLDCPLFVGDRVAFLSDHEGVGNVYSCR 237

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            DG+  R   +     A   +  G  +++          +++ +D
Sbjct: 238 PDGTGLRRHTDHDAFYARNAASDGERIVY------QCAGEMWLVD 276



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 41/110 (37%), Gaps = 10/110 (9%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQERLL-VEDSNLQA- 394
           + +       D  +SP G  +A++      S  +  +  + +      L+ V D   +  
Sbjct: 496 VVRSFNGPVRDLAFSPDGAWLAWSHPGVGRSLRQIKLARISEGDGPFSLIDVTDGRFEDE 555

Query: 395 -PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN---GRNETLINTPAYASDP 440
            P ++  GR L F   +  D    +++ DL+   G    L+   +    P
Sbjct: 556 NPVFTGDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPHLVTLSSATPSP 605



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 37/127 (29%), Gaps = 10/127 (7%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA----MDIYSVDLQSNATERL- 297
           +T   R  + + +F   +    FS +G     S          + +  +         + 
Sbjct: 487 ETADARVVEVVRSFNGPVRDLAFSPDGAWLAWSHPGVGRSLRQIKLARISEGDGPFSLID 546

Query: 298 -TNTLFINISASYSPDSSQIVFESDREGKEQLYV----MQSNGSDQKRISQDKEASYFDP 352
            T+  F + +  ++ D   + F S R       V    +      +  +     A+    
Sbjct: 547 VTDGRFEDENPVFTGDGRYLAFLSWRGFDPVYDVHTGDLSFPLGCRPHLVTLSSATPSPF 606

Query: 353 VWSPQGD 359
             S  G 
Sbjct: 607 ALSADGR 613



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 1/63 (1%)

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ- 441
            RL  + + L  P +SP G  L F   +  D    L  +  +     L +     +    
Sbjct: 52  RRLTADRTKLSHPRFSPDGAHLAFVSWRSLDPEIHLAEVAGDTPVRQLTHWAGRDTRVCG 111

Query: 442 WVG 444
           W  
Sbjct: 112 WSP 114


>gi|212691261|ref|ZP_03299389.1| hypothetical protein BACDOR_00752 [Bacteroides dorei DSM 17855]
 gi|212666493|gb|EEB27065.1| hypothetical protein BACDOR_00752 [Bacteroides dorei DSM 17855]
          Length = 816

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 77/199 (38%), Gaps = 28/199 (14%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFI 303
           + +      + A   S++G+  L+   +            +Y +D+Q+   E L +    
Sbjct: 325 QPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPTTLFSLYRLDMQTLQAELLIDKDGF 384

Query: 304 NISASYSPDSSQIVFESDRE-----GKE------------QLYVMQSNGSDQKRISQDKE 346
              A +SPD +Q++     E     GK             QLY++         +++D  
Sbjct: 385 ISGARFSPDGTQVLVSGSPESLGGIGKNVKEGQTPSMTDGQLYLLNIADKRVTPLTKDFN 444

Query: 347 ASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSL 404
            S    VW+   G  I FT  + + +++  M   DG   +L V +  + + + + +   +
Sbjct: 445 PSVQRAVWNKADGQ-IYFTAENRDCYSLYRMNPADGKILQLEVAEDLVNSFSLAQNAPVM 503

Query: 405 IFSRKKDGDTGSKLYSIDL 423
            +   +      +LY+++ 
Sbjct: 504 AY-YGQSASNSDRLYTMNT 521



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 59/263 (22%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-----FSSNGKRALI 274
           SP+ + +           R   +  R   + +        +LA R     +     R   
Sbjct: 187 SPDGRYLI-------TNYRTTCVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYY 239

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---------- 324
           +    +   +  VD  +     L N    +    ++P    ++F   +EG          
Sbjct: 240 TRTGVDGRQLIVVDPLTGVEAVLVN-KLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEV 298

Query: 325 ------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-------TK 365
                       +  L          + ++     + +    S  G  +         TK
Sbjct: 299 LEPDDRQPGWRNRSYLAKYDLKTGLLQPLTF-GYHNVWAADISNDGRYLLMMTSQSRLTK 357

Query: 366 FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK-----------KDGD 413
                F++  +     Q  LL++ D  +    +SP G  ++ S             K+G 
Sbjct: 358 RPTTLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVSGSPESLGGIGKNVKEGQ 417

Query: 414 TGS----KLYSIDLNGRNETLIN 432
           T S    +LY +++  +  T + 
Sbjct: 418 TPSMTDGQLYLLNIADKRVTPLT 440


>gi|169597937|ref|XP_001792392.1| hypothetical protein SNOG_01761 [Phaeosphaeria nodorum SN15]
 gi|160707622|gb|EAT91410.2| hypothetical protein SNOG_01761 [Phaeosphaeria nodorum SN15]
          Length = 841

 Score = 53.1 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 36/241 (14%), Positives = 82/241 (34%), Gaps = 21/241 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           N+ I+  S   ++G    ++     DG     +       + +   SP+ Q +A A+   
Sbjct: 53  NTTIVAGSGFFITGSEDGTVSKYTLDGNKFEEILDRATLPIRDVALSPDGQWIAVASERT 112

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                  +     D+  K++             ++G   + S+++D+   +  +D     
Sbjct: 113 LRDQPRAVKHVSFDKTGKQLAVS---------CADGNIYMYSLEEDQPEMVKKID---GM 160

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDP 352
            + L      +    + PD               + VM ++  +++R+      A     
Sbjct: 161 IKSLETDAESSSRVLWHPDGRAFA---TPTALRDVQVMSTSDWERQRVFKTGHSADITAA 217

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            WSP G L+A T        + +      +     +D  + + A  W P+   L ++  +
Sbjct: 218 AWSPNGALLATTSSD---LNLSLWDTKTQKMLKKFDDVKATILAMAWHPTENILSYTNNE 274

Query: 411 D 411
            
Sbjct: 275 G 275


>gi|328873256|gb|EGG21623.1| WD40 repeat-containing protein [Dictyostelium fasciculatum]
          Length = 1440

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 75/235 (31%), Gaps = 33/235 (14%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +                +    +SP+ Q +A       D  +V   +T       
Sbjct: 765 QLFVWEWKSETFILKQQGHAYNMNTIAYSPDGQIIA----TGGDDCKVKAWNTNSGFCYV 820

Query: 252 RIGNFRSMILAPRFSS-NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              +  + +   +FS  + +  L S   D ++  Y +              + N     S
Sbjct: 821 TFADHEAPVSVVKFSPVSSQMVLFSASLDGSVRAYDM------------IRYRNFRTFVS 868

Query: 311 PDSSQIVFES---DREG---------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           P+ +Q  F S   D  G           ++YV          I     +  +   ++P  
Sbjct: 869 PNKTQ--FSSLAIDSTGDIVVAGSVDSFEIYVWSIKTGKLTDILSGHTSPVYGLSFNPVN 926

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +++A   +  +   +  +  D      L   S++   ++SP G+    S   DG+
Sbjct: 927 NILASASWD-KTVRLWDIFNDAQMLESLEHTSDVLTCSFSPDGKRFA-SASLDGN 979



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 48/207 (23%), Positives = 74/207 (35%), Gaps = 36/207 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+   +           RV L D   + +          I     S  GK  ++S   
Sbjct: 390 FTPDGNTLISPV-----GNRVTLFDLVNNSSVTLPVETNRDIDIIAISPTGKILIVS--- 441

Query: 279 DEAMDIYSVDLQ-----SNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYV 330
           DEA   Y ++LQ            T         S   +SP++S I F  +R    ++Y 
Sbjct: 442 DEAGLTYIINLQRHVCLGTVKFHKT--------PSCIQFSPNNSLIAFSVER----RVYF 489

Query: 331 MQSNGSDQ-----KRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             S   ++      R+S     S  + V WSP    +     S    AI   KK GSQ  
Sbjct: 490 YSSPKLEKVVKPITRLSVITFQSIINHVGWSPCSTKVV-VSLSDGNIAICK-KKKGSQAI 547

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           L  +    ++  +S  G+ +I   K D
Sbjct: 548 LRTQGRVPKSAHFSQDGKKIIVFTKTD 574



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 60/181 (33%), Gaps = 32/181 (17%)

Query: 247 DRAPKRIGNFRSMILAPRFSS---------NGKRALISVQKDEAMDIYSVDLQSNATERL 297
            R  KR+        A  F            GK  LI    +E     +++L   +   +
Sbjct: 689 WRRGKRVPTGPVKATAFGFHPFSGLAVVGQKGKFILIDTN-NELKRAMTMNLSGTSITSI 747

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                     + +P    I   S   G+  ++  +S     K+  Q    +     +SP 
Sbjct: 748 ----------AINPSGEWIAIGSADLGQLFVWEWKSETFILKQ--QGHAYNMNTIAYSPD 795

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSP-SGRSLIFSRKKDG 412
           G +IA     G+   +     +     +   D   +AP     +SP S + ++FS   DG
Sbjct: 796 GQIIA---TGGDDCKVKAWNTNSGFCYVTFAD--HEAPVSVVKFSPVSSQMVLFSASLDG 850

Query: 413 D 413
            
Sbjct: 851 S 851


>gi|298492117|ref|YP_003722294.1| WD40 domain-containing protein ['Nostoc azollae' 0708]
 gi|298234035|gb|ADI65171.1| WD40 repeat, subgroup ['Nostoc azollae' 0708]
          Length = 334

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/170 (12%), Positives = 60/170 (35%), Gaps = 10/170 (5%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D             D +++    SP+ Q +A       +   V L + +  +  ++
Sbjct: 161 IRLWDLKQQRPLATLVRFDHLIYTLAMSPDGQTLA----SSNNKGVVKLWNLQTGKLIRQ 216

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +     ++    F+ +G   + S  +D+ + I++      A + LT       + + +  
Sbjct: 217 LNAHYQVVTGLAFTPDGVTLV-SSSRDKTIKIWNFS-NGQAVKTLTGHQDWVNALAINLH 274

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              +       GK+ + +      + K      +       ++P G ++A
Sbjct: 275 DKTLA----SAGKDGIKLWDLTTENLKNTLSAHKDWVSAIAFTPDGKILA 320


>gi|260832702|ref|XP_002611296.1| hypothetical protein BRAFLDRAFT_210907 [Branchiostoma floridae]
 gi|229296667|gb|EEN67306.1| hypothetical protein BRAFLDRAFT_210907 [Branchiostoma floridae]
          Length = 716

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 43/125 (34%), Gaps = 20/125 (16%)

Query: 313 SSQIVFESDRE------GKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTK 365
             + V++ D            L +        + +     E S    VW P G  + F  
Sbjct: 191 GEEFVYQEDWGEGLVAKHHPVLCIFDIEEETTQVLENVPDEVSPGQAVWCPDGKGVVFVG 250

Query: 366 FSGEKFAIGVM------------KKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG 412
           +    F +G++              DG   + L  +D +++ P +SP G  L++ +   G
Sbjct: 251 WWHVPFRLGIIYCTNRRSALFHLDLDGRTCKQLTGDDLSVRCPRFSPDGSRLVYLQNPPG 310

Query: 413 DTGSK 417
              S 
Sbjct: 311 GPHSS 315



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 50/189 (26%), Gaps = 36/189 (19%)

Query: 219 FSPNQQKVAYATYDD----------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           + P+ + V +  +             +            R  K++      +  PRFS +
Sbjct: 239 WCPDGKGVVFVGWWHVPFRLGIIYCTNRRSALFHLDLDGRTCKQLTGDDLSVRCPRFSPD 298

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G R +               +     +  T     +I    S D    V+  D       
Sbjct: 299 GSRLVYLQNPPGGPHSSCSQVAMYLWKEKTAVEVTDIVRQVSGDGFPGVYTWDIG----- 353

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                                F   W+     +        + A+ ++  D ++ + L  
Sbjct: 354 ---------------------FLQCWAADSRRVVLHTNWRSRMALIIINTDTNEVKKLSA 392

Query: 389 DSNLQAPTW 397
           + ++ A  W
Sbjct: 393 EGDVTAAAW 401



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 64/196 (32%), Gaps = 39/196 (19%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFES-----DREG-------KE 326
             +   D++   T+ L N     +S     + PD   +VF        R G       + 
Sbjct: 210 PVLCIFDIEEETTQVLENVP-DEVSPGQAVWCPDGKGVVFVGWWHVPFRLGIIYCTNRRS 268

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-------IGVMKKD 379
            L+ +  +G   K+++ D + S   P +SP G  + + +              + + K+ 
Sbjct: 269 ALFHLDLDGRTCKQLTGD-DLSVRCPRFSPDGSRLVYLQNPPGGPHSSCSQVAMYLWKEK 327

Query: 380 GSQE-----RLLVEDSNLQAPT--------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            + E     R +  D      T        W+   R ++     +  +   L  I+ +  
Sbjct: 328 TAVEVTDIVRQVSGDGFPGVYTWDIGFLQCWAADSRRVVL--HTNWRSRMALIIINTDTN 385

Query: 427 NETLINTPAYASDPQW 442
               ++     +   W
Sbjct: 386 EVKKLSAEGDVTAAAW 401



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 81/233 (34%), Gaps = 32/233 (13%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F   I++ +        +++L  +D DG   + LT   D  +  PRFSP+  ++ Y   
Sbjct: 255 PFRLGIIYCTNR------RSALFHLDLDGRTCKQLT-GDDLSVRCPRFSPDGSRLVYLQN 307

Query: 232 DDEDILR------VYLMDTRIDRAPKRIGNFRSMILAP-----------RFSSNGKRALI 274
                        +YL   +       I    S    P            ++++ +R ++
Sbjct: 308 PPGGPHSSCSQVAMYLWKEKTAVEVTDIVRQVSGDGFPGVYTWDIGFLQCWAADSRRVVL 367

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASY----SPDSSQIVFESDREGKEQLYV 330
                  M +  ++  +N  ++L +      +A++      D   +   S     + L  
Sbjct: 368 HTNWRSRMALIIINTDTNEVKKL-SAEGDVTAAAWRLLDIRDDLILAACSAPNTSQHLRC 426

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSP--QGDLIAFT-KFSGEKFAIGVMKKDG 380
                + Q+ + + +      P  +P     +I  T    G ++   +M+K G
Sbjct: 427 AVLPPAGQEHLVKWETLDVEVPTLTPPLDHKVITLTPADEGMEYEAILMRKRG 479


>gi|113865883|ref|NP_001038941.1| WD repeat-containing protein 38 [Homo sapiens]
 gi|74755676|sp|Q5JTN6|WDR38_HUMAN RecName: Full=WD repeat-containing protein 38
 gi|57160643|emb|CAI39637.1| WD repeat domain 38 [Homo sapiens]
          Length = 314

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 70/198 (35%), Gaps = 11/198 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    FSP+ Q +   + D      VY  +TR  +   R+G     +   RF
Sbjct: 16  FFGQHGGEVNSSAFSPDGQMLLTGSEDG----CVYGWETRSGQLLWRLGGHTGPVKFCRF 71

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G     S   D  + ++ V  ++     L        + S+SPDS Q+         
Sbjct: 72  SPDG-HLFASASCDCTVRLWDV-ARAKCLRVLKGHQRSVETVSFSPDSRQLA---SGGWD 126

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQE 383
           +++ +         R+      S     +SP  + +A   +      + + ++    S +
Sbjct: 127 KRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQ 186

Query: 384 RLLVEDSNLQAPTWSPSG 401
            L    +N+    +S SG
Sbjct: 187 ALEGHSANISCLCYSASG 204



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 8/160 (5%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +  T   R  K  G     + +  FS +G+  L +  +D  +  +          RL   
Sbjct: 5   VPATLAVRRVKFFGQHGGEVNSSAFSPDGQMLL-TGSEDGCVYGWET-RSGQLLWRLGGH 62

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   +SPD       S       + +     +   R+ +  + S     +SP    
Sbjct: 63  TGPVKFCRFSPDGHLFASASC---DCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQ 119

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSP 399
           +A   +        V    G   RLLV   + +Q+  +SP
Sbjct: 120 LASGGWDKRVMLWDVQS--GQMLRLLVGHRDSIQSSDFSP 157



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 72/224 (32%), Gaps = 16/224 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D   A    +     + +    FSP+ +++A   +D     RV L D +
Sbjct: 80  SASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDK----RVMLWDVQ 135

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFI 303
             +  + +   R  I +  FS        +   D  + I+ + + + A     L      
Sbjct: 136 SGQMLRLLVGHRDSIQSSDFSPTVNCLA-TGSWDSTVHIWDLRMVTPAVSHQALEGHSAN 194

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                YS         +     + +++ +   S      +          +SP    +A 
Sbjct: 195 ISCLCYSASG----LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLA- 249

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
              +G    + V   +  +    ++          ++P G+ L+
Sbjct: 250 --SAGYSRMVKVWDCNTGKCLETLKGVLDVAHTCAFTPDGKILV 291


>gi|39972327|ref|XP_367554.1| hypothetical protein MGG_07465 [Magnaporthe oryzae 70-15]
 gi|145016652|gb|EDK01082.1| hypothetical protein MGG_07465 [Magnaporthe oryzae 70-15]
          Length = 900

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 95/237 (40%), Gaps = 25/237 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I  L+ S++ I F    + + + +A+       +L V+   +      K+ G+F SM  A
Sbjct: 293 IHTLSISQNGIDFV-SINKSGEWLAFGASKLGQLL-VWEWQSE-SYILKQQGHFDSMN-A 348

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESD 321
             +S +GKR + +   D  + ++  D++S       T       +  ++   + ++F + 
Sbjct: 349 LAYSPDGKRIV-TAADDGKLKVW--DIESGFCIVTFTEHTSGVTACQFAKKGN-VLFTAS 404

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +G  + + +     + +  +     S+      P G+++A        F + +      
Sbjct: 405 LDGSIRAWDL-IRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSLD--SFDVHIWSVQTG 461

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +LL + S  + P     ++P G  L+       D  ++++S+     N T  + P
Sbjct: 462 --QLLDQLSGHEGPVSAVAFAPDGGLLVSGSW---DKTARIWSV----FNRTQTSEP 509



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 64/316 (20%), Positives = 112/316 (35%), Gaps = 50/316 (15%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           FNLI   S  Q   +  SI +  +W + GA  L           +L V    W+ +    
Sbjct: 290 FNLIHTLSISQNGIDFVSINKSGEWLAFGASKL----------GQLLV----WEWQSESY 335

Query: 139 IIGKK--------FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG--- 187
           I+ ++           SP   R +  T +DD    +   +  F         S V+    
Sbjct: 336 ILKQQGHFDSMNALAYSPDGKRIV--TAADDGKLKVWDIESGFCIVTFTEHTSGVTACQF 393

Query: 188 -IIKNSLCVMDRDGA----------NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               N L     DG+          N R  T             P+ + VA  + D    
Sbjct: 394 AKKGNVLFTASLDGSIRAWDLIRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSLDS--- 450

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             V++   +  +   ++      + A  F+ +G   L+S   D+   I+SV  ++  +E 
Sbjct: 451 FDVHIWSVQTGQLLDQLSGHEGPVSAVAFAPDGG-LLVSGSWDKTARIWSVFNRTQTSEP 509

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM----QSNGSDQKR-ISQDKEASYFD 351
           L       +S +  PDSSQ+   S  +G+   + +    Q +G D +R +S  ++ +   
Sbjct: 510 L-QLQADVLSVAVRPDSSQLA-VSTLDGQISFWSVTEAQQVSGVDGRRDVSGGRKITDRR 567

Query: 352 PVWSPQGDLIAFTKFS 367
              +  G   AF    
Sbjct: 568 TAANAGGTK-AFHTIQ 582


>gi|42558923|sp|Q8J1L4|DPP5_TRISH RecName: Full=Dipeptidyl-peptidase 5; AltName:
           Full=Dipeptidyl-peptidase V; Short=DPP V; Short=DppV;
           AltName: Allergen=Tri s 4; Flags: Precursor
 gi|23894227|emb|CAD23374.1| tri s 4 allergen [Trichophyton schoenleinii]
          Length = 726

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 33/186 (17%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-------YSPDSSQIVFESDREG 324
           A+ S    +  D YS D +     +                    S D   + F S    
Sbjct: 188 AVFSGSLTKNGDKYSFDGKLKNLVQPVKYAESPYPPFGGSGDYDLSSDGKTVAFMSKAPE 247

Query: 325 KEQ-------LYVMQSNGS---------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             +       ++++  +GS         +  R  Q  E +   PV+SP G  IA+ + + 
Sbjct: 248 LPKANLTTSYIFLVPHDGSRVAEPINKRNGPRTPQGIEGASSSPVFSPDGKRIAYLQMAT 307

Query: 369 EKFA-----IGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYS 420
           + +      I + +   ++    +  S  ++P    WS  GR+L  + +       KL++
Sbjct: 308 KNYESDRRVIHIAEVGSNKPVQRIASSWDRSPEAVKWSSDGRTLYVTAEDH--ATGKLFT 365

Query: 421 IDLNGR 426
           +  + R
Sbjct: 366 LPADAR 371



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 73/237 (30%), Gaps = 37/237 (15%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S  IY  +      +++ +     +V SG +  +      DG     + P +      P 
Sbjct: 166 SARIYDGLFVRH--WDTYVGTQFNAVFSGSLTKNGDKYSFDGKLKNLVQPVKYAESPYPP 223

Query: 219 F--------SPNQQKVAYAT---------------YDDEDILRVYLMDTRIDRAPKRIGN 255
           F        S + + VA+ +               +                  P+    
Sbjct: 224 FGGSGDYDLSSDGKTVAFMSKAPELPKANLTTSYIFLVPHDGSRVAEPINKRNGPRTPQG 283

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISAS-- 308
                 +P FS +GKR        +  +     I+  ++ SN   +   +   + S    
Sbjct: 284 IEGASSSPVFSPDGKRIAYLQMATKNYESDRRVIHIAEVGSNKPVQRIAS-SWDRSPEAV 342

Query: 309 -YSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLI 361
            +S D   +   ++     +L+ + ++  D      +  D   S F  + S +  LI
Sbjct: 343 KWSSDGRTLYVTAEDHATGKLFTLPADARDNHKPSVVKHDGSVSSFYFIGSSKSVLI 399


>gi|229169099|ref|ZP_04296814.1| TolB domain protein [Bacillus cereus AH621]
 gi|228614327|gb|EEK71437.1| TolB domain protein [Bacillus cereus AH621]
          Length = 384

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 76/228 (33%), Gaps = 47/228 (20%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   + +T    + +  P++S N + +AYA     +   +Y +     +  K++   +S 
Sbjct: 16  GEKEKQITKG--EYITGPKWSHNGEWLAYAKGKKRNHFELYRL-----KDGKKVTPSQSA 68

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
               ++S           +   ++I+ V+ +    E + N        ++ PD  + +  
Sbjct: 69  TSNYQWSPTENIIAFVFAR--TLNIFDVEKKKADFENVANGAGDY---AWYPDGKKFLVS 123

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASY---------------------FDPVWSPQG 358
           S+       +     G+    I +D   +                          WSP  
Sbjct: 124 SEAYLLPTGWT----GAQLYEIQKDANMNPHKMKHLYALPNEHDDFLALVGSGFKWSPDQ 179

Query: 359 DLIAF-----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNLQAPT 396
             I+F        S +   + +++ DGS      + LL       AP+
Sbjct: 180 KWISFFAVPTASLSADSNTLCLIRSDGSRFETVDQMLLNTQWFKWAPS 227



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 57/135 (42%), Gaps = 13/135 (9%)

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
               +++T   +I     +S +   + +    +GK++ +       D K+++  + A+  
Sbjct: 16  GEKEKQITKGEYI-TGPKWSHNGEWLAYA---KGKKRNHFELYRLKDGKKVTPSQSAT-S 70

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK- 409
           +  WSP  ++IAF         I  ++K  +    +   +   A  W P G+  + S + 
Sbjct: 71  NYQWSPTENIIAFV--FARTLNIFDVEKKKADFENVANGAGDYA--WYPDGKKFLVSSEA 126

Query: 410 ---KDGDTGSKLYSI 421
                G TG++LY I
Sbjct: 127 YLLPTGWTGAQLYEI 141



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       + +  K G +E+ + +   +  P WS +G  L +++ K      +LY
Sbjct: 2   KVAFIR----NHNLWI--KFGEKEKQITKGEYITGPKWSHNGEWLAYAKGKK-RNHFELY 54

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+   +  + +  S+ QW  
Sbjct: 55  RLK-DGKK--VTPSQSATSNYQWSP 76


>gi|242814060|ref|XP_002486294.1| eukaryotic translation initiation factor subunit eIF2A, putative
           [Talaromyces stipitatus ATCC 10500]
 gi|218714633|gb|EED14056.1| eukaryotic translation initiation factor subunit eIF2A, putative
           [Talaromyces stipitatus ATCC 10500]
          Length = 686

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 62/185 (33%), Gaps = 17/185 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V  S  S   + +L ++   GA    +   R+  + +  +SPN ++             +
Sbjct: 246 VDRSGKSYYGETTLYLLSATGAFDSRIDLDREGPIHDVTWSPNSKEFGVVYGFMPAKTTI 305

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  LAPR    FS +G+  +++   + A  +   DL+    +
Sbjct: 306 FNF---------RGIATHSYPLAPRNTIVFSPHGRFVVVAGFGNLAGQMDIYDLEKGHQK 356

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             T          +SPD   I     S R   +    +       +    +  +  +   
Sbjct: 357 ITTIEGSNATVCEWSPDGKHILTATTSPRLRVDNGVRIWHVTGALQ--YNEDMSELYQVC 414

Query: 354 WSPQG 358
           W PQG
Sbjct: 415 WRPQG 419



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 70/213 (32%), Gaps = 25/213 (11%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKD------ 279
            +          V +        P  +   F+   +  +++++G   ++  Q D      
Sbjct: 192 VFTPERKGQPASVKVFVVPQFNNPVSQKTFFKGDKVQLKWNNSGTSVIVLAQTDVDRSGK 251

Query: 280 ---EAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSN 334
                  +Y +        R+  +        ++SP+S +  V       K  ++     
Sbjct: 252 SYYGETTLYLLSATGAFDSRIDLDREGPIHDVTWSPNSKEFGVVYGFMPAKTTIF----- 306

Query: 335 GSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSN 391
             + + I+      A     V+SP G  +    F      + +   +   +++   E SN
Sbjct: 307 --NFRGIATHSYPLAPRNTIVFSPHGRFVVVAGFGNLAGQMDIYDLEKGHQKITTIEGSN 364

Query: 392 LQAPTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
                WSP G+ ++ +        D G +++ +
Sbjct: 365 ATVCEWSPDGKHILTATTSPRLRVDNGVRIWHV 397


>gi|167535194|ref|XP_001749271.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772137|gb|EDQ85792.1| predicted protein [Monosiga brevicollis MX1]
          Length = 313

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/291 (15%), Positives = 94/291 (32%), Gaps = 27/291 (9%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R   H  S     SIT +K          +     G  K SL      G   R       
Sbjct: 36  RTFPHPNSQINVLSITPDK----------TTIAAGGNPKISLYDTLAMGTGAREEFEGHQ 85

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             + +  FS +   ++ ++ D      V + D R  R  +R  N ++ + +     +   
Sbjct: 86  SNVTDLCFSADGSFLSTSSEDG----TVKIWDHRASREHQRNFNHQASVTSVALHPSLPH 141

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            + S  +   +  + +         +          + SPD + +V  ++     + Y+ 
Sbjct: 142 -VFSGDEQGRVVRWDLKANHCEEHLIPEPDVAIRHLATSPDGAHLVAVNNEG---RCYIW 197

Query: 332 QSNGSDQK---RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
            S+ S+ +   ++           V+SP    +  T  + +   I    KD      L  
Sbjct: 198 DSSRSECQAKLKLDVHPSTYALSCVFSPDSRWLV-TTGADQTVHIYDAHKDFRLHATLTG 256

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             + +    +S     L+       D   +L+ I  + + ET++    +  
Sbjct: 257 HTAWVWRAAFSGDSAYLV---TVSSDKTGRLWDIRAD-QPETVLEFKGHQR 303


>gi|149412149|ref|XP_001506211.1| PREDICTED: similar to WD repeat domain 51A [Ornithorhynchus
           anatinus]
          Length = 879

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 69/203 (33%), Gaps = 19/203 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGA-------NIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
              S   G       ++  DG        N+         I+    FSPN + +A  + D
Sbjct: 243 PLFSPGLGKGACGEELIGWDGEKGVRGDPNLERHFRGHRDIITSLDFSPNMKYLASGSMD 302

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 V + + +      R    +  ++  +FS +G     S  +D+ + ++  +++  
Sbjct: 303 S----CVVIWNLKPQTKAYRFVGHQDAVMCVQFSPSGNLLA-SGSRDQTVRLWIPNMKGE 357

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           +            S  +S D   +V  SD    ++   + +    +   S +   ++   
Sbjct: 358 SAV-FKAHKASVRSVHFSSDGQLLVTASD----DKTIKVWTVHKQKFLFSLNLHVNWVRC 412

Query: 353 V-WSPQGDLIAFTKFSGEKFAIG 374
             +SP G LI  +    +   I 
Sbjct: 413 AKFSPDGKLIV-SSSDDKTVRIW 434



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 66/166 (39%), Gaps = 9/166 (5%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             R +I +  FS N K    S   D  + I+++  Q+ A   + +   +     +SP  +
Sbjct: 279 GHRDIITSLDFSPNMKYLA-SGSMDSCVVIWNLKPQTKAYRFVGHQDAVMCV-QFSPSGN 336

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S R+   +L++    G     + +  +AS     +S  G L+  T    +   + 
Sbjct: 337 LLASGS-RDQTVRLWIPNMKGESA--VFKAHKASVRSVHFSSDGQLLV-TASDDKTIKVW 392

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            + K      L +  + ++   +SP G+ ++ S     D   +++ 
Sbjct: 393 TVHKQKFLFSLNLHVNWVRCAKFSPDGKLIVSSSD---DKTVRIWD 435


>gi|145242528|ref|XP_001393837.1| periodic tryptophan protein 2 [Aspergillus niger CBS 513.88]
 gi|134078388|emb|CAK40378.1| unnamed protein product [Aspergillus niger]
          Length = 903

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 90/232 (38%), Gaps = 23/232 (9%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I  L+ S+  I      + + + +A+ +     +L V+   +      K+ G+  SM  A
Sbjct: 288 IHQLSVSQSNIDCV-TINKSGEWLAFGSSQHGQLL-VWEWQSE-SYILKQQGHLDSMN-A 343

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESD 321
             +S +G+R + +   D  + ++  D++S       T       +  +S   + ++F + 
Sbjct: 344 LAYSPDGQRIV-TAADDGKIKVW--DVKSGFCLVTFTEHTSGVTACEFSKKGN-VLFTAS 399

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +G  + + +     + +  +     S+      P G+       S + F I +      
Sbjct: 400 LDGSVRAWDL-IRYRNFRTFTAPSRLSFSSLAVDPSGE--VVCAGSPDSFDIHIWSVQTG 456

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +LL + +  + P     ++  G  L+       D   +++SI   GR +T
Sbjct: 457 --QLLDQLAGHEGPIVTMAFAADGSHLVTGSW---DRTVRVWSIF--GRTQT 501



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/229 (12%), Positives = 70/229 (30%), Gaps = 11/229 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  L V +    +           +    +SP+ Q++  A  D +    + + D +
Sbjct: 313 GSSQHGQLLVWEWQSESYILKQQGHLDSMNALAYSPDGQRIVTAADDGK----IKVWDVK 368

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                       S + A  FS  G   L +   D ++  + + ++       T    ++ 
Sbjct: 369 SGFCLVTFTEHTSGVTACEFSKKGN-VLFTASLDGSVRAWDL-IRYRNFRTFTAPSRLSF 426

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S S + D S  V  +       +++               E       ++  G  +    
Sbjct: 427 S-SLAVDPSGEVVCAGSPDSFDIHIWSVQTGQLLDQLAGHEGPIVTMAFAADGSHLVTGS 485

Query: 366 FSGEKFAIGVM-KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +        +  +   S+   L   +++ +  + P G+ +  +   DG 
Sbjct: 486 WDRTVRVWSIFGRTQTSEPLQL--QADVLSVAFRPDGKQVA-ASTLDGQ 531


>gi|73979616|ref|XP_540049.2| PREDICTED: similar to WD repeat domain 17 isoform 1 [Canis
           familiaris]
          Length = 1253

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 71/197 (36%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P +   +A AT  +      ++ D 
Sbjct: 387 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGDLNCIAGATSRNG----AFIWDI 442

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R   + ++ I    +S  + KR   +   D    I +VD       +      
Sbjct: 443 KRGKMVQRFNEHGKNGIFCVAWSHKDSKRIA-TCSGDGFCIIRTVD--GKVLHKY-KHPA 498

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 499 AVFGCDWSQNNKDMIATGCEDKNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLSEGIL 558

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 559 CSGSDDGSVRIWDYTQD 575


>gi|328864930|gb|EGG13316.1| G beta like protein [Dictyostelium fasciculatum]
          Length = 325

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 84/232 (36%), Gaps = 18/232 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    +L + D +            + +    FS + +++   + D    +   + + +
Sbjct: 85  SGSWDGTLRLWDINSGLTTRRFQGHTKDVMSVCFSFDHRQIISGSRDKRICVWNTIGELK 144

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            D + K+  +    +   R+S N ++ ++S   D+ + ++ +   +       +T +IN 
Sbjct: 145 YDLSEKQNQSHTEWVSCVRYSPN-EQIVVSGGWDKNVKVWDMKTYTCKFTLEGHTGYINT 203

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG------- 358
             + SPD S         GK+Q+  +      Q     D   +     +SP         
Sbjct: 204 V-TISPDGSLCA----SGGKDQMACLWELQKGQPLYKLDARGTINALAFSPNKYWLCAAT 258

Query: 359 -DLIAFTKFSGEKFAIGVMKKDGSQ----ERLLVEDSNLQAPTWSPSGRSLI 405
            D I       +   + ++    S     ++   + ++  +  W+P G +L 
Sbjct: 259 DDKILIWDLLSKSILLEIVLPKKSANPEAKKRETKPASCISLAWAPDGTTLY 310


>gi|312385382|gb|EFR29902.1| hypothetical protein AND_00837 [Anopheles darlingi]
          Length = 1618

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 56/172 (32%), Gaps = 16/172 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    +  +   D      L     Q +    F PN   +A  + D    L V +    
Sbjct: 717 TGSRDTTARLWSTDRKFPLMLYAGHTQDVDTIAFHPNGSYLATGSTD----LTVRMWCVT 772

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTLFIN 304
             +  +   + R  +    FS +GK         E   ++  DL        L +     
Sbjct: 773 SGKQLRLFTDCRQPVQRVCFSPDGKYLA---AGGEESRVHIFDLAAGAQLTELKDHTAAI 829

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             A++SPDS   V  S  +G  +++       D KR+      +      +P
Sbjct: 830 SCATWSPDSRHFV-SSCVDGTIRIW-------DAKRMLSTSVDTATSSATTP 873



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 56/206 (27%), Gaps = 14/206 (6%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDG--ANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + +LF     +   +     +    G   N R +    +  ++    SP    +A  + D
Sbjct: 662 TDLLFSEHDPLLMSVSRDCTMRAWTGHDYNCRAVYRGHNHPIWTVAESPTGLFLATGSRD 721

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                   L  T               +    F  NG     +   D  + ++ V     
Sbjct: 722 T----TARLWSTDRKFPLMLYAGHTQDVDTIAFHPNGSYLA-TGSTDLTVRMWCV-TSGK 775

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                T+         +SPD   +    +     ++++       Q    +D  A+    
Sbjct: 776 QLRLFTDCRQPVQRVCFSPDGKYLAAGGEES---RVHIFDLAAGAQLTELKDHTAAISCA 832

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKK 378
            WSP       +   G    I +   
Sbjct: 833 TWSPDSRHFVSSCVDGT---IRIWDA 855



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 60/164 (36%), Gaps = 16/164 (9%)

Query: 256 FRSMILAPRF----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +R     P +    S  G     +  +D    ++S D +        +T  ++  A + P
Sbjct: 696 YRGHN-HPIWTVAESPTGLFLA-TGSRDTTARLWSTDRKFPLMLYAGHTQDVDTIA-FHP 752

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           + S +      +   +++ +      Q R+  D         +SP G  +A     GE+ 
Sbjct: 753 NGSYLA-TGSTDLTVRMWCV--TSGKQLRLFTDCRQPVQRVCFSPDGKYLA---AGGEES 806

Query: 372 AIGVMKK-DGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGD 413
            + +     G+Q   L +  + +   TWSP  R  + S   DG 
Sbjct: 807 RVHIFDLAAGAQLTELKDHTAAISCATWSPDSRHFV-SSCVDGT 849



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 37/98 (37%), Gaps = 13/98 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A       +  RV++ D         + +  + I    +S + +   +S   
Sbjct: 792 FSPDGKYLA----AGGEESRVHIFDLAAGAQLTELKDHTAAISCATWSPDSRH-FVSSCV 846

Query: 279 DEAMDIY--------SVDLQSNATERLTNTLFINISAS 308
           D  + I+        SVD  +++    +++       S
Sbjct: 847 DGTIRIWDAKRMLSTSVDTATSSATTPSHSSAHQTQHS 884


>gi|307136497|gb|ADN34297.1| WD-repeat protein [Cucumis melo subsp. melo]
          Length = 420

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 69/199 (34%), Gaps = 9/199 (4%)

Query: 219 FSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           FSPN + +A A        D L              +I +  + I   R+S + +  L +
Sbjct: 15  FSPNARFIAVAVDYRLVVRDTLSFKAWSLTQPEWTCKIDDGPAGIAYARWSPDSRHILTT 74

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                 + ++S+   +    +        +S  ++ D       + ++ K+ + ++  + 
Sbjct: 75  SDFQLRLIVWSLVNTACVHVQWPKHTSKGVS--FTKDGKFAAVCTRKDCKDYINLISCHT 132

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNL 392
            +   +         D  WSP    I     S  ++ + +   DG    + +       +
Sbjct: 133 WEIMGVFAVDTLDLADLEWSPDDSSIV-VWDSPLEYKVLIYSPDGRCLFKYQAYESGLGV 191

Query: 393 QAPTWSPSGRSLIFSRKKD 411
           ++ +WSP G+ L       
Sbjct: 192 KSVSWSPCGQFLAVGSYDQ 210



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 55/165 (33%), Gaps = 13/165 (7%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                 +   R+SP+ + +   +      LR+ +           +   +       F+ 
Sbjct: 53  DDGPAGIAYARWSPDSRHILTTSDFQ---LRLIVWSLVNTACVH-VQWPKHTSKGVSFTK 108

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDRE 323
           +GK A +  +KD    I  +   +     +     ++        +SPD S IV   D  
Sbjct: 109 DGKFAAVCTRKDCKDYINLISCHT---WEIMGVFAVDTLDLADLEWSPDDSSIV-VWDSP 164

Query: 324 GKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + ++ +   +G    K  + +         WSP G  +A   + 
Sbjct: 165 LEYKVLIYSPDGRCLFKYQAYESGLGVKSVSWSPCGQFLAVGSYD 209


>gi|188582207|ref|YP_001925652.1| cytochrome c class I [Methylobacterium populi BJ001]
 gi|179345705|gb|ACB81117.1| cytochrome c class I [Methylobacterium populi BJ001]
          Length = 448

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 68/256 (26%), Gaps = 45/256 (17%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    +  V   D      +    D  +      P+ +   +A+  ++   R+ L   
Sbjct: 45  VSGGFDQAAIVWGLDTGAALSVLRFHDGAVNAVAALPDGR---FASGSEDG--RIALWRL 99

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 + +      +     + +G     S   D    ++   L   A   L       
Sbjct: 100 GQTEPERVLEGHTGPVAGLAVAPDGSVLA-SAAWDGTARLW--PLAGGAARVLEGHRGNV 156

Query: 305 ISASYSPDSSQIVFESD-------REGKEQL---------------------------YV 330
            + ++ PD   +   +D       REG+  +                             
Sbjct: 157 NAVAFLPDGRPVTAGADATVRIWTREGEAAVTATLPSALSAVAVTADGGIAAAGADATVR 216

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             +     +   +   A       SP G  IA     G    I   +  G     LV   
Sbjct: 217 FLAEDGSTRGEVELGPAPVIALAPSPDGTRIAAASAGGTVAMIE--RATGKILFTLVGPG 274

Query: 391 N-LQAPTWSPSGRSLI 405
             + +  W P G  L+
Sbjct: 275 LPVWSVAWRPDGSELV 290


>gi|152966820|ref|YP_001362604.1| hypothetical protein Krad_2874 [Kineococcus radiotolerans SRS30216]
 gi|151361337|gb|ABS04340.1| hypothetical protein Krad_2874 [Kineococcus radiotolerans SRS30216]
          Length = 426

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 53/166 (31%), Gaps = 30/166 (18%)

Query: 264 RFSSNGKRALI----------SVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPD 312
             S +G    +          S       D+  VD  +     L       +   ++SPD
Sbjct: 111 ALSGDGSTIAVGDWDTSTPGASAGGPGRADVALVDAATGDVRTLALPDARAVLPLAWSPD 170

Query: 313 SSQIV----------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           + ++           F S  +    L V+       + +            +SP G L+A
Sbjct: 171 ARRLAYLSPTEAADPFASPTDPAGDLLVLDVGSGRARPV--PGVDDAVSAAFSPDGRLLA 228

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSL 404
             +  G   A+ V   DG+  R LV     D       +SP GR L
Sbjct: 229 VQRSGG---AVEVRAGDGTLRRTLVPPRAGDVLAAGAAFSPDGRLL 271



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 53/159 (33%), Gaps = 18/159 (11%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T   GD+++       +   G  +  + ++D    ++R L     + +    +SP+ +++
Sbjct: 118 TIAVGDWDTST---PGASAGGPGRADVALVDAATGDVRTLALPDARAVLPLAWSPDARRL 174

Query: 227 AYAT-------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           AY +       +         L+   +     R        ++  FS +G+   +     
Sbjct: 175 AYLSPTEAADPFASPTDPAGDLLVLDVGSGRARPVPGVDDAVSAAFSPDGRLLAVQRSGG 234

Query: 280 EAMDIYSVDLQSNATER-LTNTLFINI---SASYSPDSS 314
                  V        R L      ++    A++SPD  
Sbjct: 235 ----AVEVRAGDGTLRRTLVPPRAGDVLAAGAAFSPDGR 269



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 33/96 (34%), Gaps = 10/96 (10%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----------FTKFSGEKFAI 373
           G+  + ++ +   D + ++     +     WSP    +A          F   +     +
Sbjct: 137 GRADVALVDAATGDVRTLALPDARAVLPLAWSPDARRLAYLSPTEAADPFASPTDPAGDL 196

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            V+     + R +    +  +  +SP GR L   R 
Sbjct: 197 LVLDVGSGRARPVPGVDDAVSAAFSPDGRLLAVQRS 232


>gi|295085951|emb|CBK67474.1| Dipeptidyl peptidase IV (DPP IV) N-terminal region./Prolyl
           oligopeptidase family. [Bacteroides xylanisolvens XB1A]
          Length = 765

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/341 (13%), Positives = 117/341 (34%), Gaps = 64/341 (18%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D     +++ K    +  ++   A  +S    +     + DF+ R L+        + 
Sbjct: 67  LFDT---PELLSKIAVYTKKAYSAAAPHLSFTFMKDNETIRLDFD-RGLYTYNIRTKVLK 122

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K     + +DG              +  ++SP+   + YA+ D  ++  V       D  
Sbjct: 123 KLDEKPIYKDG------------DPYWKKYSPDSLYMLYASKD--NLYFVGNPKKGQDTI 168

Query: 250 PKRIGNFRSMIL-----------------APRFSSNGKRALISVQKDEA--MDIYSVDLQ 290
           P ++                         +  +   G     +V++D     D++ ++  
Sbjct: 169 PVQLTTDGGPDYTFNREDEGKMEGRFGAESAHWLP-GTHRFYAVREDNRKVRDLWLINSL 227

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           S   E LT         +   D +Q           +L +   +  + K++  ++    +
Sbjct: 228 SKFPE-LTTYKA---ELAGDKDVTQ----------YELLLGDVDKREVKKVDINRWPDQY 273

Query: 351 DPVW--SPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVE-------DSNLQAPTWSP 399
             V   +  G  + F +++    +  I  +  +  Q R+++        D  +++ ++  
Sbjct: 274 IDVLYTTNDGKRLYFQRYNRSWNQSDICEVDVETGQVRVVIHEENKPYLDYQMRSVSFLK 333

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            G+ ++F  +++G     LY     G  +  +    + + P
Sbjct: 334 DGKEILFRSERNGWGHYYLYDT-ATGNLKNQVTDGTWVAGP 373



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 16/154 (10%)

Query: 268 NGKRALISV--QKDEAMDIYSVDLQSNATERLT---NTLFINI---SASYSPDSSQIVFE 319
           +GKR       +     DI  VD+++     +    N  +++    S S+  D  +I+F 
Sbjct: 282 DGKRLYFQRYNRSWNQSDICEVDVETGQVRVVIHEENKPYLDYQMRSVSFLKDGKEILFR 341

Query: 320 SDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAF------TKFSGEKFA 372
           S+R G    Y+  +   + K +++     +         G    F             + 
Sbjct: 342 SERNGWGHYYLYDTATGNLKNQVTDGTWVAGPIAKIDTVGRKFYFYGYGREKSIDPYYYI 401

Query: 373 IGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLI 405
           +   K D  +  RLL  ++       SPS   ++
Sbjct: 402 LYEAKLDQLNAIRLLTPENASHEARISPSNHYIV 435



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/183 (12%), Positives = 59/183 (32%), Gaps = 27/183 (14%)

Query: 221 PNQQKVAYATYDDED------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            + +++ +  Y+          + V     R+    +        + +  F  +GK  L 
Sbjct: 281 NDGKRLYFQRYNRSWNQSDICEVDVETGQVRVVIHEENKPYLDYQMRSVSFLKDGKEILF 340

Query: 275 SVQKDEAMDIYSVDLQSNATE-RLTNTLF-------INISASYSPDSSQIVFE------S 320
             +++     Y  D  +   + ++T+  +       I+          +  F       S
Sbjct: 341 RSERNGWGHYYLYDTATGNLKNQVTDGTWVAGPIAKIDTV------GRKFYFYGYGREKS 394

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  LY  + +  +  R+   + AS+ +   SP    I  +  +  +  + V++   
Sbjct: 395 IDPYYYILYEAKLDQLNAIRLLTPENASH-EARISPSNHYIVDSYSTVSQEPVNVVRNSR 453

Query: 381 SQE 383
            + 
Sbjct: 454 GKV 456


>gi|172036065|ref|YP_001802566.1| WD repeat-containing protein [Cyanothece sp. ATCC 51142]
 gi|171697519|gb|ACB50500.1| WD-repeat protein [Cyanothece sp. ATCC 51142]
          Length = 737

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 78/248 (31%), Gaps = 33/248 (13%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            +LWD+   K++     F S   W           Y  +    G             VS 
Sbjct: 519 LKLWDLTTGKEL---STFRSHNQWE----------YAVVITPDGL----------KAVSA 555

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              ++L + D             +  +     + +  KV  A+ D      + L D  I 
Sbjct: 556 SRDHTLKLWDLSTGKKLSSLRGHNDRVCAVSITSDGLKVVSASRDH----TLKLWDLAIG 611

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R          MI     + +G +  +S   DE + ++ +          T       + 
Sbjct: 612 RELYTFEGHNDMIYDVSITPDGLK-AVSASLDETLKLWDL-GTGRELWTFTGHNASVNAV 669

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S +PD  + V  S     E L V    G+ ++ ++   ++       SP G  +     S
Sbjct: 670 SVTPDGLKAVSASL---DETLKVWDL-GTGEELVTFSGDSPMICCSVSPDGLTVVAGDSS 725

Query: 368 GEKFAIGV 375
           G+   + +
Sbjct: 726 GKVHFLRL 733


>gi|163782017|ref|ZP_02177016.1| putative alpha-isopropylmalate/homocitrate synthase family
           transferase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882549|gb|EDP76054.1| putative alpha-isopropylmalate/homocitrate synthase family
           transferase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 301

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 82/220 (37%), Gaps = 21/220 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    ++ +    FS + +++A      +D+  + L +    +   +       + +  F
Sbjct: 100 VLKDHEEYVRALAFSRHGRRLA----SGDDLWEIRLWNATDWKLINKFEGHSGWVFSIDF 155

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S   +    S  KD  + ++  D    ++  L          S+SPD  ++V      G 
Sbjct: 156 SP-AEDIFASASKDTTVRLWYPD---GSSVVLEGHEDYVYDLSFSPDGKRLVSV----GN 207

Query: 326 EQLYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +   ++  + S ++ + + K  E + +   +SP+G LIA   F      +   K      
Sbjct: 208 DGYLIVW-DVSAKRGLFKVKAHEGAIYTVHYSPKGGLIATAGFDP-VIKLWNAKDFSLVG 265

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            L      +    +SP GR LI      GD   ++   D+
Sbjct: 266 TLRGHKGAVLRLRFSPDGRRLI-----SGDDRGRVIIWDI 300



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 56/188 (29%), Gaps = 11/188 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             + SG     + + +     +          +F   FSP +   A A+ D        +
Sbjct: 118 RRLASGDDLWEIRLWNATDWKLINKFEGHSGWVFSIDFSPAEDIFASASKDT------TV 171

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                D +   +      +    FS +GKR + SV  D  + ++ V  +     ++    
Sbjct: 172 RLWYPDGSSVVLEGHEDYVYDLSFSPDGKRLV-SVGNDGYLIVWDVSAK-RGLFKVKAHE 229

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +  YSP    I           + +  +         +  + +     +SP G  +
Sbjct: 230 GAIYTVHYSPKGGLIA---TAGFDPVIKLWNAKDFSLVGTLRGHKGAVLRLRFSPDGRRL 286

Query: 362 AFTKFSGE 369
                 G 
Sbjct: 287 ISGDDRGR 294



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 21/168 (12%), Positives = 59/168 (35%), Gaps = 9/168 (5%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I +        F+       +   S     ++ +   DG+++  +    +  +++  FSP
Sbjct: 140 INKFEGHSGWVFSIDFSPAEDIFASASKDTTVRLWYPDGSSV--VLEGHEDYVYDLSFSP 197

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + +++        +   + + D    R   ++      I    +S  G     +   D  
Sbjct: 198 DGKRLVSV----GNDGYLIVWDVSAKRGLFKVKAHEGAIYTVHYSPKGGLIA-TAGFDPV 252

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           + +++     +    L       +   +SPD  +++   DR G+  ++
Sbjct: 253 IKLWNA-KDFSLVGTLRGHKGAVLRLRFSPDGRRLISGDDR-GRVIIW 298



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 68/198 (34%), Gaps = 17/198 (8%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-MDIY 285
            + T  D+  +RV+ +     +    I +    +L+   +   KR  I+   D+  + ++
Sbjct: 37  FFVTCGDDGFVRVWTLQ---GKKILDIKSHNGQVLSVAIN---KRGFIASAGDDMLIKVW 90

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            +       + L +      + ++S    ++      +   ++ +  +         +  
Sbjct: 91  RLP-TGKLVKVLKDHEEYVRALAFSRHGRRLA---SGDDLWEIRLWNATDWKLINKFEGH 146

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
               F   +SP  D+ A          + +   DGS   L   +  +   ++SP G+ L+
Sbjct: 147 SGWVFSIDFSPAEDIFASASKDTT---VRLWYPDGSSVVLEGHEDYVYDLSFSPDGKRLV 203

Query: 406 FSRKKDGDTGSKLYSIDL 423
                  D    ++ +  
Sbjct: 204 ---SVGNDGYLIVWDVSA 218



 Score = 37.3 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 46/131 (35%), Gaps = 17/131 (12%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D +Y       G          + +VS      L V D       +   + +  ++   +
Sbjct: 188 DYVYDLSFSPDG----------KRLVSVGNDGYLIVWDVSAKRGLFKVKAHEGAIYTVHY 237

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP    +A A +D      + L + +       +   +  +L  RFS +G+R +     D
Sbjct: 238 SPKGGLIATAGFD----PVIKLWNAKDFSLVGTLRGHKGAVLRLRFSPDGRRLI---SGD 290

Query: 280 EAMDIYSVDLQ 290
           +   +   D++
Sbjct: 291 DRGRVIIWDIR 301


>gi|209517685|ref|ZP_03266522.1| WD-40 repeat protein [Burkholderia sp. H160]
 gi|209501860|gb|EEA01879.1| WD-40 repeat protein [Burkholderia sp. H160]
          Length = 364

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/260 (18%), Positives = 85/260 (32%), Gaps = 30/260 (11%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           ++ H   D   + +  + G +  R   V+ S  SG    S   +   G     LT     
Sbjct: 104 RLVHLRLDGTSELVAHDAGAWIDR---VATSPASGRCYASGRRVHWLGPKPACLTLPGSA 160

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
                 F P   ++A +           +     D   +R+  +        +S +G+  
Sbjct: 161 TSM--AFDPGGTRLAISHQGG-------VTLWAADTLSERLLAWPGYHRNVAWSPDGRYL 211

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVM 331
           + S  ++ A+  + +       E +        S S+S D     F +   G +   +  
Sbjct: 212 V-SGMEENALHGWRLP-DGADME-MGGYPGQPRSLSFSADGR---FLATSGGMRAVCWRF 265

Query: 332 QSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
              G+D    +  I+     S       P   LIA    SG   A+ + +   S    + 
Sbjct: 266 DPPGADDVPHESGIAGKTPVSRVACH--PVHPLIAVGYHSG---AVLLCQPGSSDILFIK 320

Query: 388 EDSN--LQAPTWSPSGRSLI 405
              N  + A  WSP GR L 
Sbjct: 321 GSGNSAVSAMRWSPDGRRLA 340


>gi|311748659|ref|ZP_07722444.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Algoriphagus sp. PR1]
 gi|126577188|gb|EAZ81436.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Algoriphagus sp. PR1]
          Length = 643

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 72/229 (31%), Gaps = 33/229 (14%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE---PRFSPNQQKV 226
            G   S I     S  + + +     +  D  NI+ L   +++          SP+   +
Sbjct: 173 SGRRASGIYPADGSPYTKLFRTRAEGLRVDVGNIQTLPEFQNEEGLNQAAIAISPDGNTI 232

Query: 227 AYA---TYDDEDILRVYLMDT--RIDRAPKRIG-----NFRSMILAPRFSSNGKRALISV 276
            YA   +   +D+    L  +  R     + I      +       P FS +G+    + 
Sbjct: 233 IYARGNSTSPKDLPETALFASYFRGAGFTQPIWLPVNEDETWWNSTPAFSPDGEELYFAS 292

Query: 277 QKD---EAMDIY----SVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKE 326
            +      +D+Y      +        L    NT    +    + D     F SD  G  
Sbjct: 293 NRPGGFGGIDLYKATKLANGDFGNAVNLGPNVNTPGNELFPRMTADGKFF-FSSD--GHP 349

Query: 327 QLYVMQS----NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
               +       G+D  ++ ++   ++  P        I F+ +  E F
Sbjct: 350 GYGKLDLFVAEKGADGNQVIKNLGENFNSPS---DDFGIFFSNYPKEGF 395



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 56/176 (31%), Gaps = 36/176 (20%)

Query: 299 NTLFINISASYSPDSSQIVFESDR--------EGKE--QLYVMQSNG-----SDQKRI-- 341
           NT   + +   S +   + F S R        +G    +L+  ++ G      + + +  
Sbjct: 154 NTAGADYAPVISEN--FMYFTSGRRASGIYPADGSPYTKLFRTRAEGLRVDVGNIQTLPE 211

Query: 342 -SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLV------- 387
              ++  +      SP G+ I + + +           +      G+     +       
Sbjct: 212 FQNEEGLNQAAIAISPDGNTIIYARGNSTSPKDLPETALFASYFRGAGFTQPIWLPVNED 271

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGS-KLYSID--LNGRNETLINTPAYASDP 440
           E      P +SP G  L F+  + G  G   LY      NG     +N     + P
Sbjct: 272 ETWWNSTPAFSPDGEELYFASNRPGGFGGIDLYKATKLANGDFGNAVNLGPNVNTP 327


>gi|303320039|ref|XP_003070019.1| Dipeptidyl-peptidase V precursor, putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240109705|gb|EER27874.1| Dipeptidyl-peptidase V precursor, putative [Coccidioides posadasii
           C735 delta SOWgp]
          Length = 723

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 49/148 (33%), Gaps = 30/148 (20%)

Query: 310 SPDSSQIVFESD------------------REGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           SPD   + F S                    +G  +   + +         +    +   
Sbjct: 236 SPDGQTVAFMSKAPELPKANLTTSYIFVGPHDGSAEFTPINARDGPATP--EGVRGASTS 293

Query: 352 PVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAP---TWSPSGRS 403
           P +SP    IA+ +  GE +      I V     S     V +   ++P    W+ +GR+
Sbjct: 294 PKFSPDSKKIAYVQMHGENYESDRNIIYVATLGSSPSIRAVAEDWDRSPDSIQWTRNGRT 353

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           L F+ +  G    KL+S+       T  
Sbjct: 354 LYFTAEDRGTV--KLFSVSATAGRRTRP 379



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 45/145 (31%), Gaps = 24/145 (16%)

Query: 219 FSPNQQKVAYAT---------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            SP+ Q VA+ +               +                  P      R    +P
Sbjct: 235 ISPDGQTVAFMSKAPELPKANLTTSYIFVGPHDGSAEFTPINARDGPATPEGVRGASTSP 294

Query: 264 RFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISA---SYSPDSSQ 315
           +FS + K+        E  +     IY   L S+ + R       + S     ++ +   
Sbjct: 295 KFSPDSKKIAYVQMHGENYESDRNIIYVATLGSSPSIR-AVAEDWDRSPDSIQWTRNGRT 353

Query: 316 IVFESDREGKEQLYVMQSNGSDQKR 340
           + F ++  G  +L+ + +    + R
Sbjct: 354 LYFTAEDRGTVKLFSVSATAGRRTR 378



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 46/120 (38%), Gaps = 14/120 (11%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFE---------PRFSPNQQKVAYATYDDEDILR--- 238
           + + V   DG+       +RD              P+FSP+ +K+AY     E+      
Sbjct: 259 SYIFVGPHDGSAEFTPINARDGPATPEGVRGASTSPKFSPDSKKIAYVQMHGENYESDRN 318

Query: 239 -VYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            +Y+       + + +  ++     + +++ NG+    + +    + ++SV   +    R
Sbjct: 319 IIYVATLGSSPSIRAVAEDWDRSPDSIQWTRNGRTLYFTAEDRGTVKLFSVSATAGRRTR 378



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 48/158 (30%), Gaps = 31/158 (19%)

Query: 266 SSNGKRALISVQK------------------DEAMDIYSVDLQSNATERLTNTLFINISA 307
           S +G+      +                   D + +   ++ +             + S 
Sbjct: 236 SPDGQTVAFMSKAPELPKANLTTSYIFVGPHDGSAEFTPINARDGPATP-EGVRGASTSP 294

Query: 308 SYSPDSSQIVFE--------SDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQG 358
            +SPDS +I +         SDR     +YV     S   R +++D + S     W+  G
Sbjct: 295 KFSPDSKKIAYVQMHGENYESDR---NIIYVATLGSSPSIRAVAEDWDRSPDSIQWTRNG 351

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             + FT        +  +     +        N+ + +
Sbjct: 352 RTLYFTAEDRGTVKLFSVSATAGRRTRPRAMRNVGSVS 389


>gi|309789943|ref|ZP_07684519.1| putative WD-repeat containing protein [Oscillochloris trichoides DG6]
 gi|308227963|gb|EFO81615.1| putative WD-repeat containing protein [Oscillochloris trichoides DG6]
          Length = 1619

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 92/259 (35%), Gaps = 22/259 (8%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-------RFSPNQQKVAY-ATYDDE 234
             ++S     ++ V D  G ++        +    P         S +QQ++A+  T D  
Sbjct: 1302 RIISAARDMAVRVWDSAGYSLSNDQWPSAEETHYPDVGGQIVAVSADQQQIAFFLTPDGS 1361

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSM-ILAP--RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +       D  I    +         +L P   FS +G   ++       + IY+    +
Sbjct: 1362 EPEYGSTGDIGIWNVAQGSAQMIGSGVLLPLAHFSPDGSNIIVQDS-SGMIQIYT----T 1416

Query: 292  NATERLTNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 +     IN +   SP++ QI  +S+  +G + + +            + ++++ +
Sbjct: 1417 ANLTLVRELGPINGTYRVSPNTQQIAAQSNAADGTQTIALWDLPHGSISTTLRGEQSAIY 1476

Query: 351  DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               +S    L+A   +   +  I  +     +  ++     + +  +S   R L+     
Sbjct: 1477 SLAYSDDSALLA-VGYENGRIEIWDVGSASLRHSIIAHRQLVMSLAFSRDQRYLL---SG 1532

Query: 411  DGDTGSKLYSIDLNGRNET 429
             GD   +L+ +  +G  E 
Sbjct: 1533 GGDKLVRLWDV-TSGELER 1550


>gi|300774191|ref|ZP_07084058.1| possible peptidase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300758870|gb|EFK55699.1| possible peptidase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 629

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 64/144 (44%), Gaps = 9/144 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREG 324
           S +GK+      ++   +I+ ++L+    +++LT    +N+   +  +  +IV+ + +  
Sbjct: 46  SPDGKQIAYLGLENHCKNIFILNLEDKSKSKQLTYQADMNVQYFFWANKDKIVYSNTQSP 105

Query: 325 KE--QLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKD 379
           ++  +L+ +  +      + +   +   + +P+      L+ A  +     F I  +  D
Sbjct: 106 EDSLRLFAIDVHTEASVPLFKPIKRRLRWVNPIVLKDNSLLAAINERDSSVFDIYRVFLD 165

Query: 380 GSQERLLVEDSNLQAPTW--SPSG 401
           G  ++LL ++      +W  SP G
Sbjct: 166 GRPKQLLDKNPGNVI-SWYGSPDG 188



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 50/146 (34%), Gaps = 12/146 (8%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +   SPD  QI +       + ++++   + S  K+++   + +     W+   D I +
Sbjct: 41  TNFKISPDGKQIAYLGLENHCKNIFILNLEDKSKSKQLTYQADMNVQYFFWA-NKDKIVY 99

Query: 364 TKFSG--EKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           +      +   +  +         L +          P        L    ++D  +   
Sbjct: 100 SNTQSPEDSLRLFAIDVHTEASVPLFKPIKRRLRWVNPIVLKDNSLLAAINERD-SSVFD 158

Query: 418 LYSIDLNGRNETLIN-TPAYASDPQW 442
           +Y + L+GR + L++  P       W
Sbjct: 159 IYRVFLDGRPKQLLDKNPGNVI--SW 182



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 77/180 (42%), Gaps = 9/180 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-- 275
           + SP+ +++AY   ++     +++++       K++     M +   F +N  + + S  
Sbjct: 44  KISPDGKQIAYLGLEN-HCKNIFILNLEDKSKSKQLTYQADMNVQYFFWANKDKIVYSNT 102

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGK-EQLYVM 331
              ++++ ++++D+ + A+  L   +      ++     D+S +   ++R+     +Y +
Sbjct: 103 QSPEDSLRLFAIDVHTEASVPLFKPIKRRLRWVNPIVLKDNSLLAAINERDSSVFDIYRV 162

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             +G   K++      +      SP G+  +A T  S E+  +    +    + ++  D 
Sbjct: 163 FLDGR-PKQLLDKNPGNVISWYGSPDGEVRLALTSDSVEESILYRPNQKTPFKEIVTNDF 221


>gi|271961979|ref|YP_003336175.1| dipeptidylaminopeptidase/acylaminoacyl-peptidase -like protein
           [Streptosporangium roseum DSM 43021]
 gi|270505154|gb|ACZ83432.1| Dipeptidylaminopeptidase/acylaminoacyl-peptidase -like protein
           [Streptosporangium roseum DSM 43021]
          Length = 588

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/263 (18%), Positives = 83/263 (31%), Gaps = 12/263 (4%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             +      +   DR   ++R  T  R +        P  Q + + +  D D    ++  
Sbjct: 32  RSNASGAWEVYAWDRAAGSMRQATA-RPKGTSHGTIDPTGQWIWWFSDTDGDEWGRWMRQ 90

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  + I            S+ G+ A+   +  E   I+ V     +T  +      
Sbjct: 91  PFTGGPDEPIDLAPGYPAGIALSATGEAAIGVARPGEGFQIHVVRP-GGSTRPIYEHAEA 149

Query: 304 NISASYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP---Q 357
              A+ S D S I       G      L V++ NG     +            ++P    
Sbjct: 150 ASVAAMSLDGSLIAISHSEHGDSRHPALRVLRQNGDTVGDLHDGSGKGVLGLRFAPVQGD 209

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             L+   +  G +  + V   +  ++R + + D       W   GRSL+  R   G T  
Sbjct: 210 RRLLTLHERRGRREPL-VWDPESDEQREIWLRDPGEITADWYGDGRSLLVVRANRGRT-- 266

Query: 417 KLYSIDLNGRNETLINTPAYASD 439
            L+  DL G     I T     D
Sbjct: 267 HLHRYDLAGGRLFPIETQHGVID 289



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 45/145 (31%), Gaps = 1/145 (0%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           RA+       A ++Y+ D  + +  + T         +  P    I + SD +G E    
Sbjct: 28  RAVYRSNASGAWEVYAWDRAAGSMRQATARPKGTSHGTIDPTGQWIWWFSDTDGDEWGRW 87

Query: 331 MQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           M+                       S  G+        GE F I V++  GS   +    
Sbjct: 88  MRQPFTGGPDEPIDLAPGYPAGIALSATGEAAIGVARPGEGFQIHVVRPGGSTRPIYEHA 147

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDT 414
                   S  G  +  S  + GD+
Sbjct: 148 EAASVAAMSLDGSLIAISHSEHGDS 172



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 6/164 (3%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYD 232
           +  ++ +S S        +L V+ ++G  +  L     + +   RF+P    +     ++
Sbjct: 158 DGSLIAISHSEHGDSRHPALRVLRQNGDTVGDLHDGSGKGVLGLRFAPVQGDRRLLTLHE 217

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                   + D   D   +        I A  +  +G+  L+         ++  DL   
Sbjct: 218 RRGRREPLVWDPESDEQREIWLRDPGEITA-DWYGDGRSLLVVRANRGRTHLHRYDLAGG 276

Query: 293 ATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
               + T    I+  A+  PD S     S   G     +  SNG
Sbjct: 277 RLFPIETQHGVIDA-ATPRPDGSVEY--SWSSGAHPPVIRSSNG 317


>gi|163753666|ref|ZP_02160789.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Kordia algicida OT-1]
 gi|161325880|gb|EDP97206.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Kordia algicida OT-1]
          Length = 626

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 64/171 (37%), Gaps = 43/171 (25%)

Query: 313 SSQIVFESDREGKEQ----------LYVMQSNG----SDQKRISQDKEASYFDP--VWSP 356
            + + F S R+G  +          +Y+   +G    S  + +S+D    Y +    +SP
Sbjct: 162 GNIVYFTSTRDGGRKYGWNDQPYLDIYMASYDGDGELSSAQALSKDINTKYHEGTVSFSP 221

Query: 357 QGDLIAFTKFS--GEKF----------AIGVMKKDGSQERLL------VEDSNLQAPTWS 398
               + FT+ S    KF           +   K  G +   +       ++ ++  P+ S
Sbjct: 222 DKKTMYFTRESYYDGKFKKDEDGKGTLNLYTAKMSGGEWTNVQPVPFNNDEYSVGHPSVS 281

Query: 399 PSGRSLIFSRKKDGDTG-SKLYSIDLN-----GRNETL---INTPAYASDP 440
             G++L F+    G  G S LY + +N     G  E L   INT      P
Sbjct: 282 ADGKTLYFASDMPGGFGQSDLYKVAINDDGSFGEPENLGGDINTEGREFFP 332



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 43/261 (16%), Positives = 80/261 (30%), Gaps = 42/261 (16%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKN-------SLCVMDRDG----ANIRYLTP 208
            +I    +      +  I++ + +   G            + +   DG    ++ + L+ 
Sbjct: 147 SEINTKNSDFGAIASGNIVYFTSTRDGGRKYGWNDQPYLDIYMASYDGDGELSSAQALSK 206

Query: 209 SRDQILFEPR--FSPNQQKVAYATY-----------DDEDILRVYLMDT----RIDRAPK 251
             +    E    FSP+++ + +              D +  L +Y          +  P 
Sbjct: 207 DINTKYHEGTVSFSPDKKTMYFTRESYYDGKFKKDEDGKGTLNLYTAKMSGGEWTNVQPV 266

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAM---DIYSV----DLQSNATERL---TNTL 301
              N    +  P  S++GK    +          D+Y V    D      E L    NT 
Sbjct: 267 PFNNDEYSVGHPSVSADGKTLYFASDMPGGFGQSDLYKVAINDDGSFGEPENLGGDINTE 326

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                   S + + + F SD  G   +  +    S  K  S     +   P+ S   D  
Sbjct: 327 GREFFPYISNNGT-LYFSSD--GNLGIGGLDVFASKVKGDSYGAVRNLGTPLNS-NSDDF 382

Query: 362 AFTKFSGEKFAIGVMKKDGSQ 382
           +FT     K       +DG +
Sbjct: 383 SFTFDEETKKGFVASNRDGGK 403


>gi|320168826|gb|EFW45725.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 739

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 7/130 (5%)

Query: 293 ATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           +   LT+   +++ A ++SPD   +   S  +    ++ M  +G+    I +   A   +
Sbjct: 406 SATVLTHPGHLSVLALAWSPDGRLLASGSAVDTAIVIWDMHLDGASCTPIRRYDGAGCGN 465

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             WSP G+ + F    G    +    +D + +R +          W     +++F  + D
Sbjct: 466 LSWSPDGNYL-FAATIGNAVRLW-NTRDWTCQRWVTAGGRCHTSAWLSDSSTVLFGIEND 523

Query: 412 GDTGSKLYSI 421
                 LYSI
Sbjct: 524 ----WGLYSI 529



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 40/106 (37%), Gaps = 5/106 (4%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIV 317
            +LA  +S +G+        D A+ I+ + L   +   +         + S+SPD + + 
Sbjct: 417 SVLALAWSPDGRLLASGSAVDTAIVIWDMHLDGASCTPIRRYDGAGCGNLSWSPDGNYL- 475

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           F +      +L+  + + + Q+ ++           W      + F
Sbjct: 476 FAATIGNAVRLWNTR-DWTCQRWVTAGGR--CHTSAWLSDSSTVLF 518


>gi|260549365|ref|ZP_05823584.1| 3-carboxymuconate cyclase [Acinetobacter sp. RUH2624]
 gi|260407474|gb|EEX00948.1| 3-carboxymuconate cyclase [Acinetobacter sp. RUH2624]
          Length = 413

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 87/279 (31%), Gaps = 41/279 (14%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF------ 256
              S          S + + +    Y+ +D                  + + N       
Sbjct: 139 TVNSHGGHPTHASISLDGKFLFVSNYSAFDKGRGGVAVFPILPNGHLGEMVQNIVFSEGS 198

Query: 257 --------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                        +  FS +GK    S   ++ + ++  +   N T+ L      +++ +
Sbjct: 199 GHVKGRQESGHAHSTTFSPDGKYLYASDLGNDKVYVFRYNP--NKTQPLEADNGRDVTFN 256

Query: 309 YSPDSSQIVFESDREG-------KEQLYVMQSNGS------DQKRISQDK---EASYFDP 352
           +      +VF SD +        + ++              + K + +DK     S    
Sbjct: 257 HGSGPRHMVFSSDGKHAYVTAEMRSEIVTFNVQDGYLKKTAELKLVHEDKTPEFKSASGI 316

Query: 353 VWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSR 408
           + SP G   IA  + S  K  +  +++DG   +  V  +N   P   ++  +G+ L  + 
Sbjct: 317 ILSPDGKYVIAANRGSDNKLLVFKIQEDGLLAQPTVYKANGIEPRAFSFDATGKYLYVTN 376

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
                    L+  D        +   A  S P  + F +
Sbjct: 377 V--FTNNISLFRFDAKNGTLKSVGDAAKISTPTNIKFFN 413


>gi|86609465|ref|YP_478227.1| S9C family peptidase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558007|gb|ABD02964.1| peptidase, S9C (acylaminoacyl-peptidase) family [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 642

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 10/115 (8%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKE----QLY 329
           S Q +    + S+DL+S + + L +      S   SPD   +V+   D         +L+
Sbjct: 139 SRQGEPENSLVSIDLESGSQQILASGHDFYASPRLSPDGQTLVWLTWDHPQMPWDGTELW 198

Query: 330 V--MQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              +  +G   + ++++     S F P WSPQGD + F       + +      G
Sbjct: 199 RSEVNPDGSLGEPQKLAGGPAESIFQPQWSPQGD-LYFVSDCSGWWNLYRWDPQG 252



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 75/191 (39%), Gaps = 23/191 (12%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+  L+    D  +   +     N   R+          +Y   +  + F +  +  ++L
Sbjct: 47  GRNVLMRRSADGILVELT-PAPFNVRTRV----HEYGGGAYWVSAGVVYFCNFAD--QRL 99

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAF----TKFSGEKFAIGVMKKDGSQE 383
           Y +   GSD + +++     Y D V    +G ++      ++    + ++  +  +   +
Sbjct: 100 YRL-LPGSDPQPLTEAGPYRYADGVVDRARGRILCVREDHSRQGEPENSLVSIDLESGSQ 158

Query: 384 RLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT---GSKLYSIDLN-----GRNETLINTP 434
           ++L    +   +P  SP G++L++           G++L+  ++N     G  + L   P
Sbjct: 159 QILASGHDFYASPRLSPDGQTLVWLTWDHPQMPWDGTELWRSEVNPDGSLGEPQKLAGGP 218

Query: 435 AYASD-PQWVG 444
           A +   PQW  
Sbjct: 219 AESIFQPQWSP 229


>gi|194373525|dbj|BAG56858.1| unnamed protein product [Homo sapiens]
          Length = 513

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 98/299 (32%), Gaps = 33/299 (11%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSI-----TGEKGDFNSRILFVSESVVSGII 189
           + + + G  + S P  +R     I+  + Q       T  + D  +R  F+         
Sbjct: 22  NNELVTGSSYESPPPDFR--GQWINLPVLQLTKDPLKTPGRLDHGTRTAFIHHREQVWKR 79

Query: 190 KNSLC-----------VMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATYDDEDI 236
             ++            + + +     ++  +    L   R+  S +     + +   ED+
Sbjct: 80  CINIWRDVGLFGVLNEIANSEEEVFEWVKTASGWALALCRWASSLHGSLFPHLSLRSEDL 139

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
           +  +   T     P      +  + +  +       L    +   + I+++D  S +T  
Sbjct: 140 IAEFAQVTNCTIVPSLKHRLQRNVASLAWKPLSASVLAVACQS-CILIWTLDPTSLSTRP 198

Query: 296 -----RLTNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                ++ +        S +++P   +++  S  +    + V   +      +   +   
Sbjct: 199 SSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIRVWDVSTGTCVPLPWFRGGG 256

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
             + +WSP G  I  T  S   F +   +     ER        Q   WSP G  L+F+
Sbjct: 257 VTNLLWSPDGSKILATTPS-AVFRVWEAQMWT-CERWPTLSGRCQTGCWSPDGSRLLFT 313


>gi|153873783|ref|ZP_02002249.1| beta transducin-like protein [Beggiatoa sp. PS]
 gi|152069751|gb|EDN67751.1| beta transducin-like protein [Beggiatoa sp. PS]
          Length = 627

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/206 (12%), Positives = 67/206 (32%), Gaps = 13/206 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             I          +     S +   +   ++D+     +   +       +        +
Sbjct: 39  QEIILTFEGHTDSIESVAISNDGNTILSGSHDN----TIKSWNLETGEEIQTFQGPTDFV 94

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFE 319
           +A  FSS+    L S   D  +  +  +      +   +       S ++SP  +Q +  
Sbjct: 95  MAVAFSSDDNTVL-SGSADNTIKAW--NKAGQKLDSFQDDFAGWFYSIAFSPTQNQALLS 151

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +  +    L +  +   ++    +  +   +  V+SP G+  A +        +     +
Sbjct: 152 TSSD--NTLKLWDTENGNETGTLKGHQDWVYLVVFSPDGNK-ALSASEDGTMKVW--DIE 206

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
             +E    E  ++ A  +SP G  ++
Sbjct: 207 NEEEAQSFEVEHIWAAAFSPDGSQIL 232



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 60/171 (35%), Gaps = 15/171 (8%)

Query: 171 GDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           G F S     +++    S    N+L + D +  N           ++   FSP+  K   
Sbjct: 134 GWFYSIAFSPTQNQALLSTSSDNTLKLWDTENGNETGTLKGHQDWVYLVVFSPDGNKALS 193

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           A+ D    ++V+ ++   +     +      I A  FS +G + L +   D  +  +  D
Sbjct: 194 ASED--GTMKVWDIENEEEAQSFEVE----HIWAAAFSPDGSQIL-TGGDDGTITQW--D 244

Query: 289 LQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             +      L        + ++S D SQ V     +G+  + +        
Sbjct: 245 ATTGVELNTLQGHTSRVYAVAFSADGSQAV---SGDGQGTINIWDIAQGKA 292


>gi|157818161|ref|NP_001100265.1| Aladin [Rattus norvegicus]
 gi|149031931|gb|EDL86843.1| achalasia, adrenocortical insufficiency, alacrimia (Allgrove,
           triple-A) (predicted), isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 72/198 (36%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  D  D +RVY  ++ I   P      +  + A  +       L    
Sbjct: 158 AWHPHTNKFAVALLD--DSIRVYNANSTI--VPSLKHRLQRNVAALAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P+   ++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPNGGWLLSASPVD--AVIL 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  +  T  S   F +   +    +       
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVLATTPS-AVFRVWEARMWTCEGW-PTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G+ L+F+
Sbjct: 329 GRCQTGCWSPDGKRLLFT 346


>gi|66820052|ref|XP_643673.1| autophagy protein 16 [Dictyostelium discoideum AX4]
 gi|3122952|sp|O15736|TIPD_DICDI RecName: Full=Protein tipD
 gi|2407788|gb|AAB70659.1| TipD [Dictyostelium discoideum]
 gi|60471772|gb|EAL69727.1| autophagy protein 16 [Dictyostelium discoideum AX4]
          Length = 612

 Score = 53.1 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 61/394 (15%), Positives = 124/394 (31%), Gaps = 93/394 (23%)

Query: 29  PTSIHAFVKVATNS-------ANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNL 81
           P      +  + ++       AN  P+ I                      L+R  VF+ 
Sbjct: 271 PAKAAVQLSESISNLVVKLPDANDVPIPIV---------------------LER-GVFS- 307

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLV-----TGRVIKEGKDRLRVEFRLWDVKDR 136
            S+     K          + W    +++        G ++  G     V  ++WDV   
Sbjct: 308 -SEAMLPSKAK--------KRWTGHNSEIYCMAFNSIGNLLATGGGDKCV--KVWDVISG 356

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q        +  S   ++ + +D+                     S++     NS  + 
Sbjct: 357 QQ--KSTLLGASQSIVSVSFSPNDE---------------------SILGTSNDNSARLW 393

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           + +    R+        ++  +F  N  +V   ++D      + L D +     + I  F
Sbjct: 394 NTELGRSRHTLTGHIGKVYTGKFI-NSNRVVTGSHDR----TIKLWDLQKGYCTRTIFCF 448

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSS 314
            S         +G     S   D ++  +  D  +    ++  +       S + SP ++
Sbjct: 449 SSCNDLVILGGSGTHLA-SGHVDHSVRFW--DSNAGEPTQVLSSIHEGQITSITNSPTNT 505

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKFSGEK 370
             +  + R+    L ++     D  R  +D E     ++    WSP G  IA     G  
Sbjct: 506 NQILTNSRDHT--LKIIDIRTFDTIRTFKDPEYRNGLNWTKASWSPDGRYIASGSIDGS- 562

Query: 371 FAIGVMKKD-GSQERLLV----EDSNLQAPTWSP 399
             I +     G   ++L       S++   +WSP
Sbjct: 563 --ICIWDATNGKTVKVLTKVHNNGSSVCCCSWSP 594



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 39/278 (14%), Positives = 76/278 (27%), Gaps = 37/278 (13%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + V D      +       Q +    FSPN + +   + D+       L +T 
Sbjct: 341 TGGGDKCVKVWDVISGQQKSTLLGASQSIVSVSFSPNDESILGTSNDN----SARLWNTE 396

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRA----LISVQKDEAMDIYSVDLQSNATER-LTNT 300
           + R+   +      +        GK      +++   D  + ++  DLQ     R +   
Sbjct: 397 LGRSRHTLTGHIGKVYT------GKFINSNRVVTGSHDRTIKLW--DLQKGYCTRTIFCF 448

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              N         + +      +   + +   + G   + +S   E        SP    
Sbjct: 449 SSCNDLVILGGSGTHLA-SGHVDHSVRFWDSNA-GEPTQVLSSIHEGQITSITNSPTNTN 506

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDS------NLQAPTWSPSGRSLIFSRKKDGDT 414
              T        I  +           +D       N    +WSP GR +       G  
Sbjct: 507 QILTNSRDHTLKI--IDIRTFDTIRTFKDPEYRNGLNWTKASWSPDGRYIA-----SGSI 559

Query: 415 GSKLYSIDL-NGRNETLINTPAYASDP----QWVGFMD 447
              +   D  NG+   ++              W    +
Sbjct: 560 DGSICIWDATNGKTVKVLTKVHNNGSSVCCCSWSPLAN 597


>gi|307324457|ref|ZP_07603665.1| phosphoesterase [Streptomyces violaceusniger Tu 4113]
 gi|306890188|gb|EFN21166.1| phosphoesterase [Streptomyces violaceusniger Tu 4113]
          Length = 916

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 65/173 (37%), Gaps = 33/173 (19%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              +V   +  I     R+   +  I++   S +G     SV  D    +  VDL++  T
Sbjct: 61  KNGQVVSSNQYIAPYGDRLVINQGKIMSSSVSPDGTHMAASVT-DGGAALAIVDLKNWKT 119

Query: 295 ERLTNT--------LFINI---SASYSPDSSQI---------VFESDREG---KEQLYVM 331
           ++L +            N+     +YSPD  Q+         VF  + +G     +   +
Sbjct: 120 QQLVSNAASSNPRISSNNVGQEGPTYSPDGKQLWLGQPDGYTVFTVNEDGSVSSPRTVTI 179

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            ++GS    +         + V+S  G  + ++  +G+   + +    G+ +R
Sbjct: 180 PADGSQHALV--------GEAVFSADGKTV-YSAVNGQNRVVSLDAATGTIKR 223



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 23/113 (20%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKK------------DGSQERLLVEDSNLQAPTWS 398
               SP G  +A    +    A+ ++                S  R+   +   + PT+S
Sbjct: 88  SSSVSPDGTHMA-ASVTDGGAALAIVDLKNWKTQQLVSNAASSNPRISSNNVGQEGPTYS 146

Query: 399 PSGRSL---------IFSRKKDGD-TGSKLYSIDLNGRNETLINTPAYASDPQ 441
           P G+ L         +F+  +DG  +  +  +I  +G    L+    +++D +
Sbjct: 147 PDGKQLWLGQPDGYTVFTVNEDGSVSSPRTVTIPADGSQHALVGEAVFSADGK 199



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 57/174 (32%), Gaps = 19/174 (10%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSESVVSGI 188
           V    Q++    + +P   R + +     I  S     G       +        V    
Sbjct: 59  VTKNGQVVSSNQYIAPYGDRLVINQ--GKIMSSSVSPDGTHMAASVTDGGAALAIVDLKN 116

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K    V +   +N R    S +     P +SP+ +++        D   V+ ++     
Sbjct: 117 WKTQQLVSNAASSNPRI--SSNNVGQEGPTYSPDGKQL---WLGQPDGYTVFTVNEDGSV 171

Query: 249 APKRI------GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           +  R       G+  +++    FS++GK        +    + S+D  +   +R
Sbjct: 172 SSPRTVTIPADGSQHALVGEAVFSADGKTVY--SAVNGQNRVVSLDAATGTIKR 223


>gi|294644441|ref|ZP_06722204.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294810436|ref|ZP_06769093.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|292640276|gb|EFF58531.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294442401|gb|EFG11211.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 765

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 46/341 (13%), Positives = 117/341 (34%), Gaps = 64/341 (18%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           L+D     +++ K    +  ++   A  +S    +     + DF+ R L+        + 
Sbjct: 67  LFDT---PELLSKIAVYTKKAYSAAAPHLSFTFMKDNETIRLDFD-RGLYTYNIRTKVLK 122

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K     + +DG              +  ++SP+   + YA+ D  ++  V       D  
Sbjct: 123 KLDEKPIYKDG------------DPYWKKYSPDSLYMLYASKD--NLYFVGNPKKGQDTI 168

Query: 250 PKRIGNFRSMIL-----------------APRFSSNGKRALISVQKDEA--MDIYSVDLQ 290
           P ++                         +  +   G     +V++D     D++ ++  
Sbjct: 169 PVQLTTDGGPDYTFNREDEGKMEGRFGAESAHWLP-GTHRFYAVREDNRKVRDLWLINSL 227

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           S   E LT         +   D +Q           +L +   +  + K++  ++    +
Sbjct: 228 SKFPE-LTTYKA---ELAGDKDVTQ----------YELLLGDVDKREVKKVDINRWPDQY 273

Query: 351 DPVW--SPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVE-------DSNLQAPTWSP 399
             V   +  G  + F +++    +  I  +  +  Q R+++        D  +++ ++  
Sbjct: 274 IDVLYTTNDGKRLYFQRYNRSWNQSDICEVDVETGQVRVVIHEENKPYLDYQMRSVSFLK 333

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            G+ ++F  +++G     LY     G  +  +    + + P
Sbjct: 334 DGKEILFRSERNGWGHYYLYDT-ATGNLKNQVTDGTWVAGP 373



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 16/154 (10%)

Query: 268 NGKRALISV--QKDEAMDIYSVDLQSNATERLT---NTLFINI---SASYSPDSSQIVFE 319
           +GKR       +     DI  VD+++     +    N  +++    S S+  D  +I+F 
Sbjct: 282 DGKRLYFQRYNRSWNQSDICEVDVETGQVRVVIHEENKPYLDYQMRSVSFLKDGKEILFR 341

Query: 320 SDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAF------TKFSGEKFA 372
           S+R G    Y+  +   + K +++     +         G    F             + 
Sbjct: 342 SERNGWGHYYLYDTATGNLKNQVTDGTWVAGPIAKIDTVGRKFYFYGYGREKSIDPYYYI 401

Query: 373 IGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLI 405
           +   K D  +  RLL  ++       SPS   ++
Sbjct: 402 LYEAKLDQLNAIRLLTPENASHEARISPSNHYIV 435



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/183 (12%), Positives = 59/183 (32%), Gaps = 27/183 (14%)

Query: 221 PNQQKVAYATYDDED------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            + +++ +  Y+          + V     R+    +        + +  F  +GK  L 
Sbjct: 281 NDGKRLYFQRYNRSWNQSDICEVDVETGQVRVVIHEENKPYLDYQMRSVSFLKDGKEILF 340

Query: 275 SVQKDEAMDIYSVDLQSNATE-RLTNTLF-------INISASYSPDSSQIVFE------S 320
             +++     Y  D  +   + ++T+  +       I+          +  F       S
Sbjct: 341 RSERNGWGHYYLYDTATGNLKNQVTDGTWVAGPIAKIDTV------GRKFYFYGYGREKS 394

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  LY  + +  +  R+   + AS+ +   SP    I  +  +  +  + V++   
Sbjct: 395 IDPYYYILYEAKLDQLNAIRLLTPENASH-EARISPSNHYIVDSYSTVSQEPVNVVRNSR 453

Query: 381 SQE 383
            + 
Sbjct: 454 GKV 456


>gi|77165441|ref|YP_343966.1| hypothetical protein Noc_1974 [Nitrosococcus oceani ATCC 19707]
 gi|76883755|gb|ABA58436.1| hypothetical protein Noc_1974 [Nitrosococcus oceani ATCC 19707]
          Length = 885

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 70/450 (15%), Positives = 140/450 (31%), Gaps = 94/450 (20%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF---VSIDELGGKVSE 67
            N +I  C+LL ++ G  PT+         +S   SP+ +A +      S + L      
Sbjct: 4   FNHRIMACVLLGMLQGAVPTAASG----DKDSQKVSPLRVAASNISLQGSGEWLPEARQR 59

Query: 68  VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE 127
           +     Q S  F  +      +  ++ D + R               +   EG+    V 
Sbjct: 60  LFGA--QGSGTFRRLPGS---ENASDSDELVRDGRL-----------QFEPEGEGGRTVR 103

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIA-HTISDDIYQSITGEKGDFNSRILFVSESVVS 186
            RL + +       +++      W  +A  +  D+I Q    +  + +  I++      +
Sbjct: 104 -RLPETEKTNG-SSERY----QKWEGVASDSPKDEIPQPKPEDVWNMDEGIVYTRIPRTT 157

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
             I+ +  +      N+       D      RFS   Q V  +    E+IL   +     
Sbjct: 158 STIEINGKIF----GNLGIYDELPDVTARLWRFSGPGQLVYRSADGREEILYDCVFPEPR 213

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISV------------------------QKDEAM 282
              P  I            S +G R   SV                        +K    
Sbjct: 214 PCVPMDI----------AVSLDGTRIAFSVYRAAHLYNRQPRGFPVEIPNKALARKGAEA 263

Query: 283 DIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKE-------------QL 328
            I+++DL +       +     +    + PD  +I+F S R G               QL
Sbjct: 264 QIFTLDLTTGKLVAWPHMPGSWDTGPVWLPD-DRIMFTSTRAGDWPSVLGSSGWHPTLQL 322

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           ++ +++GS   R+   +  +   P    +   I ++ +           +     ++L  
Sbjct: 323 WMAEADGSKAVRVGPHERDNAMHPWLHSKTGRIMYSSWQIVNMLPY---RGRGGLQVLFG 379

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +      S          ++ G   ++L
Sbjct: 380 TKDNLWWVMSVD--------QRGGSLEAEL 401


>gi|325927053|ref|ZP_08188323.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           perforans 91-118]
 gi|325542552|gb|EGD14024.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           perforans 91-118]
          Length = 758

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 63/404 (15%), Positives = 122/404 (30%), Gaps = 67/404 (16%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F  +S D     +      P F       AQ L           RL  E   +  +  
Sbjct: 54  GGFAFVSAD-----VATVQKQPAFDQARV--AQGLSAATGKPYAALRLPFEQFSFSTEGE 106

Query: 137 KQIIGKKFFSSPASWR---KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
           +      F    A+WR      H   D   Q+ +  +G    R   V          ++ 
Sbjct: 107 RSDGAIVFALDDAAWRCTLTTYHCAPDARLQATSRPRGFGVVRDPLVPADTAPRRSPDAR 166

Query: 194 CVMDRDGANI-----------RYLTPSRDQILFE---PRFSPNQQKVAYATYDDEDILRV 239
             +  DG N+           R  +  R    F+     +SP+ +++A          RV
Sbjct: 167 WEVLADGWNLVLRRVADGQVTRLSSDGRADDYFDLESVAWSPDSRQLAVYRVRPGLARRV 226

Query: 240 YLMDTRIDRAPKRI---------GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
             ++     A + +         G+   +     FS +G R                D+ 
Sbjct: 227 TRVEAAPAGAGQPVVHTQLYPKPGDAVDVERPVLFSLDGTRR---------------DVD 271

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEAS- 348
           +     L +  +      +  D   + F+  + G +++ V+  +    + R++  ++A  
Sbjct: 272 TA----LFDNPYSLSPLQWRSDGRSVAFDYVQRGFQRMRVIAVDARSARARVAVGEDART 327

Query: 349 --YFDPVWSPQ----GDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSG 401
             Y D  +       GD + +         + +   + G  +R L     +         
Sbjct: 328 FVYADRSFRHDVDGRGDEVLWISERDGWRHLYLFDGRSGKVKRQLTRGPWVVREVLRVDD 387

Query: 402 --RSLIFSRKK----DGDTGSKLYSIDLNGRNETLINTPAYASD 439
             R + F+             +LYS+D +GR  T +       D
Sbjct: 388 AQRRIWFTASGMEAGKDPYDRQLYSVDFDGRRLTRLTHADADHD 431


>gi|254561531|ref|YP_003068626.1| WD-40 repeat family protein [Methylobacterium extorquens DM4]
 gi|254268809|emb|CAX24770.1| WD-40 repeat family protein [Methylobacterium extorquens DM4]
          Length = 335

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 91/271 (33%), Gaps = 20/271 (7%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G +  S     R +A        +    + G +   +    +   +     ++   D  G
Sbjct: 66  GARLVSGGDDGRVVATAADGRSSELAQAKGGGWIDALALHGDGSFAFASSRAIVARDAKG 125

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                  P+  + L    F+P   ++A A Y+      V L    ++  P+ I  ++   
Sbjct: 126 REKTLTAPTTGRGL---AFAPKGYRLAVAHYNG-----VSLWYPNLETPPEFI-EWKGSH 176

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           L   +S +G+  + ++Q++ A+  + +        R++       S S+S D   +    
Sbjct: 177 LDVTWSPDGRFVVSTMQEN-ALHGWRLQPDRGHM-RMSGYPAKVRSLSWSSDGKWLA--- 231

Query: 321 DREGKEQLYVMQSN-----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              G E   V   +          R    + A      + P+  ++A     G    +  
Sbjct: 232 -TSGAEAAIVWPFDSKEGPTGKAPRECGVRPARVSQVAFHPKAPVLAIGYEDGCVLLVRF 290

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                   R  V+ S + A  W P+G  L F
Sbjct: 291 SDASELLVRPAVKGSAISALAWDPAGARLAF 321



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 79/183 (43%), Gaps = 18/183 (9%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           +S+G R + S   D  +   + D +S+   +     +I+  A    D S   F S R   
Sbjct: 63  ASDGARLV-SGGDDGRVVATAADGRSSELAQAKGGGWIDALA-LHGDGS-FAFASSRA-- 117

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             +    + G ++   +     +     ++P+G  +A   ++G   ++     +   E +
Sbjct: 118 --IVARDAKGREK---TLTAPTTGRGLAFAPKGYRLAVAHYNG--VSLWYPNLETPPEFI 170

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS----IDLNGRNETLINTPAYASDPQ 441
             + S+L   TWSP GR ++ + +++   G +L      + ++G    + +  +++SD +
Sbjct: 171 EWKGSHLDV-TWSPDGRFVVSTMQENALHGWRLQPDRGHMRMSGYPAKVRSL-SWSSDGK 228

Query: 442 WVG 444
           W+ 
Sbjct: 229 WLA 231



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 65/221 (29%), Gaps = 22/221 (9%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-----YDDEDILRVYLMDT 244
           K +L +   DG     +  +RD         P+   +  A+         D  RV     
Sbjct: 28  KGTLALALADGG----VLLARDGATETVAAHPDSGILVAASDGARLVSGGDDGRVVATAA 83

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               +          I A     +G  A  S +      I + D +      LT      
Sbjct: 84  DGRSSELAQAKGGGWIDALALHGDGSFAFASSRA-----IVARDAKGREKT-LTA-PTTG 136

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +++P   ++              +     +      + + S+ D  WSP G  +  T
Sbjct: 137 RGLAFAPKGYRLAVA-----HYNGVSLWYPNLETPPEFIEWKGSHLDVTWSPDGRFVVST 191

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                     +   D    R+    + +++ +WS  G+ L 
Sbjct: 192 MQENALHGWRLQ-PDRGHMRMSGYPAKVRSLSWSSDGKWLA 231


>gi|66825699|ref|XP_646204.1| hypothetical protein DDB_G0270618 [Dictyostelium discoideum AX4]
 gi|60474722|gb|EAL72659.1| hypothetical protein DDB_G0270618 [Dictyostelium discoideum AX4]
          Length = 453

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 77/236 (32%), Gaps = 37/236 (15%)

Query: 199 DGANIRYLTPSRDQILFEP----RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           DG   ++L    D +        RFSP +      T   +  L++    T+     + + 
Sbjct: 131 DGKIHKHLNDVLDNVHSSNILCLRFSPIKDSNIIVTGSTDKTLKITNYLTK-----EVLN 185

Query: 255 NFRSMILAP----RFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISAS 308
           ++     AP     F+      L++   D +  I  +D   N    ++        +   
Sbjct: 186 SYTGFASAPFISLDFNPVNPELLLASSVDGSHCIIKIDKDGNGELIQKFNRHKKYVVRVR 245

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIA-- 362
           +SPD       S     + + + + + S+Q +    K   +   V    ++P    +   
Sbjct: 246 WSPDGKMFASCSY---DKSISLFKEDESNQGQFEFVKSWDFVTTVESLIFTPDSKYVIAA 302

Query: 363 -----FTKF--SGEKFAI--GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                +  +  +   F+I    M  +G          +    + +P  + L+ S  
Sbjct: 303 VKESNYLHYLETEGDFSIERYNMNVNGDDHV----SFSAMEFSITPDKKYLLVSTD 354



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 80/231 (34%), Gaps = 40/231 (17%)

Query: 193 LCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +  +D+DG   +        + +   R+SP+ +  A  +YD    L       +      
Sbjct: 219 IIKIDKDGNGELIQKFNRHKKYVVRVRWSPDGKMFASCSYDKSISLFKEDESNQGQFEFV 278

Query: 252 RIGNFRSMILAPRFSSNGKRALISV-----------QKDEAMDIYSVDLQSNATERLTNT 300
           +  +F + + +  F+ + K  + +V           + D +++ Y++++  +      + 
Sbjct: 279 KSWDFVTTVESLIFTPDSKYVIAAVKESNYLHYLETEGDFSIERYNMNVNGDD-----HV 333

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQ 357
            F  +  S +PD   ++  +D     +L + + N + Q R    + +   +       P 
Sbjct: 334 SFSAMEFSITPDKKYLLVSTD---LNRLILFKLNSNKQIRNFYGAFNDSYTTTRNAICPS 390

Query: 358 GDLIAFTKFSG--------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           G  +  T             +  I  +    S  R L          +SP 
Sbjct: 391 GKYVFSTSQDNLIYVWEIANQKVIAKLDSHRSSVRELT---------FSPD 432


>gi|332829183|gb|EGK01847.1| hypothetical protein HMPREF9455_01995 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 717

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 66/184 (35%), Gaps = 18/184 (9%)

Query: 265 FSSNGKRAL-ISVQKDEA-MDIYSVDLQSNATE--------RLTNTLFINISASYSPDSS 314
           F   G     +++ +D+   +++  + +S            R  ++  +N    +    +
Sbjct: 277 FLPTGDELAIMTLNRDQNKFEMFFTNARSAVPRSVLNEVNSRYVDSQSLNTIHFF---GN 333

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFA 372
           Q  + S+R G   +Y+  + G  QK+++             P    + +   + S  + A
Sbjct: 334 QFTYVSERSGYAHIYLYDNTGVMQKQLTSGNYDVTGLLAVDPVTKAVFYEAAEESPLQRA 393

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETLI 431
           I  +      +  L         T+S +G+   +       +  K+ ++ D  G+   ++
Sbjct: 394 IYKVDMVKGIKTKLSAKQGTNEATFSENGKY--YINSYSNASTPKITTVHDATGKELRVL 451

Query: 432 NTPA 435
              A
Sbjct: 452 EDNA 455



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 49/141 (34%), Gaps = 27/141 (19%)

Query: 266 SSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S + KR ++        +     + Y  D++ N   +LT          +S D   + + 
Sbjct: 93  SPDEKRLVVYNDSESIYRHSFKANYYYYDVRRNLVRKLTENKSKQSVPVFSRDGRMLAYV 152

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEAS---YFDPVW--------------SPQGDLIA 362
            D      +++ + +   + ++++D E +        W              S  G L+A
Sbjct: 153 ID----NNIWLAKFDYDTESQVTKDGEINKIINGGTDWVYEEEFGTTRLMDFSADGGLLA 208

Query: 363 FTKFSGEKFAIGVMKKDGSQE 383
           F +F         M+  G+Q 
Sbjct: 209 FVRFDETAVPQYSMQMYGNQL 229



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 43/140 (30%), Gaps = 20/140 (14%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA------SYFDPVWSPQGDLIAF 363
           S D     F++DR+ K  +      G     I   K+A      S+   + SP    +  
Sbjct: 43  SADGES-YFQADRDNKMIIKYSYKTGLPTDTIFNVKKARDCTFDSFQGFLISPDEKRLVV 101

Query: 364 TKFSGEKF------AIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGS 416
              S   +               +  R L E+ S    P +S  GR L +         +
Sbjct: 102 YNDSESIYRHSFKANYYYYDVRRNLVRKLTENKSKQSVPVFSRDGRMLAYV------IDN 155

Query: 417 KLYSIDLNGRNETLINTPAY 436
            ++    +   E+ +     
Sbjct: 156 NIWLAKFDYDTESQVTKDGE 175


>gi|302186208|ref|ZP_07262881.1| hypothetical protein Psyrps6_07677 [Pseudomonas syringae pv.
           syringae 642]
          Length = 377

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 69/186 (37%), Gaps = 26/186 (13%)

Query: 260 ILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              PR   FSS+GK   +  +    +  ++++ ++ A ++++    I      +P  ++ 
Sbjct: 199 NTGPRHLAFSSDGKFLYVVGEMSGTVTAFAINQKTGALKQISQADGIPKRLKLAPGQARD 258

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              +D +      +  ++                    +P G  +  ++ +    ++  +
Sbjct: 259 ARNNDLKDDPTPRIWAAD-----------------IRIAPNGKWLFISERTTSSVSVFKV 301

Query: 377 KKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                +   +    V++   +    SP+GR L+ S +K    GS  Y+I   G  + +  
Sbjct: 302 DPASGKVTFVENYPVQEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIGEKGALQRVSE 359

Query: 433 TPAYAS 438
            P+   
Sbjct: 360 APSGKG 365


>gi|260795593|ref|XP_002592789.1| hypothetical protein BRAFLDRAFT_275667 [Branchiostoma floridae]
 gi|229278013|gb|EEN48800.1| hypothetical protein BRAFLDRAFT_275667 [Branchiostoma floridae]
          Length = 771

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 67/168 (39%), Gaps = 21/168 (12%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--LQSNATERL 297
           + + +R+ R  K +   +  +L+ R+S +G     +  +D  + I+S    L+S   ++ 
Sbjct: 91  FHLISRLGRVEKSVEAHKGAVLSGRWSYDGTAMA-TAGEDGQVRIWSRSGMLRSTMVQQG 149

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T       S ++ PDS QI++ S R    QL V     + +    +  E       W+  
Sbjct: 150 T----PVYSLAWGPDSDQILYTSGR----QLIVKPLQANAKPIQWKGHEGVILKVDWNAV 201

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSG 401
            +LI      GE     V    G   RLL        P    +W+P G
Sbjct: 202 NNLIL---SGGEDCRYKVWDSYG---RLLFTSQVHDYPITSVSWAPDG 243



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 66/195 (33%), Gaps = 22/195 (11%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            G ++     ++ +   G ++    +  R G  +R     +   ++   + P+  ++ Y 
Sbjct: 113 SGRWSYDGTAMATAGEDGQVR----IWSRSGM-LRSTMVQQGTPVYSLAWGPDSDQILYT 167

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +       ++ +   + +  P +      +IL   +++     ++S  +D    ++  D 
Sbjct: 168 S-----GRQLIVKPLQANAKPIQWKGHEGVILKVDWNA-VNNLILSGGEDCRYKVW--DS 219

Query: 290 QSNATERLTN--TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                   T+    +   S S++PD           G      +         + +    
Sbjct: 220 YGRLL--FTSQVHDYPITSVSWAPDGELFAV-----GSFNTLRLCDKTGWSYALEKPNTG 272

Query: 348 SYFDPVWSPQGDLIA 362
           S F+  WS  G  IA
Sbjct: 273 SVFNIAWSSDGTQIA 287


>gi|195449505|ref|XP_002072101.1| GK22499 [Drosophila willistoni]
 gi|194168186|gb|EDW83087.1| GK22499 [Drosophila willistoni]
          Length = 334

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 225 KVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +    T   +D+++V+ L D    +   ++      +++   SS+G+    S   D +M 
Sbjct: 55  RDFIVTGGLDDLVKVWDLADDNTVKLRHKLKGHSLGVVSVAVSSDGETIA-SSSLDSSMC 113

Query: 284 IYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++  D ++   +  LT       +  +SP +  ++     +GK  + +        +++ 
Sbjct: 114 LW--DARTGDKKHMLTFGPVDLWTVGFSPCNKYVI-SGLNDGK--ISMYSVETGKAEQVL 168

Query: 343 QDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSP 399
             +   Y     +SP G  +A     G    I +      +    +E   +   +  +SP
Sbjct: 169 DAQNGKYTLSIAYSPDGKYVASGAIDG---IITIFDVAAGKVAQTLEGHAMPVRSLCFSP 225

Query: 400 SGRSLIFSRKKDGDTGSKLYSI 421
           + + L+       D   KLY +
Sbjct: 226 NSQMLLTGSD---DGHMKLYDV 244



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 63/182 (34%), Gaps = 14/182 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   + L     +      +SP+ + VA    D      + + D    +  + +      
Sbjct: 162 GKAEQVLDAQNGKYTLSIAYSPDGKYVASGAIDG----IITIFDVAAGKVAQTLEGHAMP 217

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + +  FS N  + L++   D  M +Y V   S+    L+      +  S+S D       
Sbjct: 218 VRSLCFSPN-SQMLLTGSDDGHMKLYDV-AHSDVVGTLSGHASWVLCVSFSEDGKHFA-S 274

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           S  +   +++    + S++K +    E S   +   +S   D +  +    +   I    
Sbjct: 275 SSSDRSVKIW----DTSERKCLHTFNEHSDQVWGVRYSLGNDKVI-SASEDKSLNIYYCP 329

Query: 378 KD 379
            +
Sbjct: 330 PN 331


>gi|91083025|ref|XP_974697.1| PREDICTED: similar to WD repeat domain 56 [Tribolium castaneum]
 gi|270007651|gb|EFA04099.1| hypothetical protein TcasGA2_TC014334 [Tribolium castaneum]
          Length = 749

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 61/177 (34%), Gaps = 19/177 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R +  S D  ++   ++P+ Q +AY          + +     +  P R      ++L 
Sbjct: 138 LRSIVVSSDNSVYGASWAPDSQSIAYT-----QGKFIVIKQLAPNTKPLRWKAHEELVLC 192

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFE 319
             +S      ++S  +D    ++          +L  +   +    S +++P+       
Sbjct: 193 LAWSP-ASELIVSGGEDCQYKVW-----DGQGRQLFYSGPHDNHITSIAWAPNGDLFAVG 246

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           S       + +   +G   + + +      +   WS  G  +A    +G  F   ++
Sbjct: 247 S----YNTVRLCDYSGW-SRSLEKPTTGCVYKMAWSGDGTQLAGACANGHVFFAHIV 298



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 39/283 (13%), Positives = 96/283 (33%), Gaps = 31/283 (10%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHT----ISDDIYQSITGEKGDFNSRILFVSESV 184
            ++ + D  Q++   +  S    +K+A       + D  Q +    G  +     +  + 
Sbjct: 27  EVYSIGDDNQLL--SWSVSNNQSKKVAQLGKDLFAID-MQFLPRTSGTLSKHGDLILVTS 83

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G       +M+R G   R +   +  IL   ++  +   +   T  ++  ++++   +
Sbjct: 84  ADGKFH----IMNRSGRIERSVEAHKGAILVG-QWGNDGAGLL--TAGEDGCIKIW---S 133

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           R       + +  + +    ++ + +    +  + + + I  +   +    R      + 
Sbjct: 134 RSGMLRSIVVSSDNSVYGASWAPDSQSIAYT--QGKFIVIKQLAPNTKPL-RWKAHEELV 190

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAF 363
           +  ++SP S  IV      G E       +G  ++        ++     W+P GDL A 
Sbjct: 191 LCLAWSPASELIV-----SGGEDCQYKVWDGQGRQLFYSGPHDNHITSIAWAPNGDLFAV 245

Query: 364 TKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLI 405
             ++     + +    G    L       +    WS  G  L 
Sbjct: 246 GSYN----TVRLCDYSGWSRSLEKPTTGCVYKMAWSGDGTQLA 284


>gi|310822343|ref|YP_003954701.1| adventurous gliding motility protein AglU [Stigmatella aurantiaca
           DW4/3-1]
 gi|309395415|gb|ADO72874.1| Adventurous gliding motility protein AglU [Stigmatella aurantiaca
           DW4/3-1]
          Length = 533

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 91/304 (29%), Gaps = 48/304 (15%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKN----SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              G F + +L   +  + GI        L ++   G   R +      +     F+P  
Sbjct: 60  SPNGQFLTYLLEAKKPRLDGIPPQMVLGELYLVPVTGGTPRKVGEGVTNVPGGLLFTPET 119

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             V +    +       L    +             +     S +G+R            
Sbjct: 120 GHVLFLGGYNPASQAGALYAQSLTDPTAEPVKLGENVTYMLPSPDGQRVAF--------- 170

Query: 284 IYSVDLQSNATE--RLTNTLFINIS-----ASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                +     +   L    F ++      A ++PD   ++F+          ++ + G 
Sbjct: 171 -----VDGGVLKLGPLPKGPFQDVGGEVSTAQFTPDGQVLLFKR--------KLVAAGGL 217

Query: 337 DQKRISQDKEA------SYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQERLLV 387
              R++Q  EA         D   S  G  +A+   S      + + +      + R + 
Sbjct: 218 AVVRVAQAAEAPRKLGDYAGDYEVSKDGRHVAWQVRSEAVRGMYDLFIADVADLKPRQVA 277

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET----LINTPAYASDPQWV 443
             +      +SP  R L  +     +    L+    NG         +   A+A D Q +
Sbjct: 278 TGTKAFG--FSPDSRWLARTENGKPEQLGDLFVGPANGSAGRKVGERVEEFAFAPDSQAL 335

Query: 444 GFMD 447
           GF++
Sbjct: 336 GFLE 339


>gi|313675974|ref|YP_004053970.1| peptidase s9b dipeptidylpeptidase iv domain protein [Marivirga
           tractuosa DSM 4126]
 gi|312942672|gb|ADR21862.1| peptidase S9B dipeptidylpeptidase IV domain protein [Marivirga
           tractuosa DSM 4126]
          Length = 791

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 57/181 (31%), Gaps = 23/181 (12%)

Query: 262 APRFSSNGKRALISVQKDEA--MDIYSVDLQSNAT----ERLTNTLFINISAS------- 308
           +P FS +G   +I  +  +     ++ ++ ++        +                   
Sbjct: 334 SPLFSDDGNFVVIDARATDNKDRWLFLLNPETAKLDLVDRQ--RDEAWIAGPGVGYAWGG 391

Query: 309 ----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAF 363
               +  D+  + F+S+  G   LY +  + + +K+      E   +D   S   +   F
Sbjct: 392 STKGFLADNKTLYFQSEESGYSHLYSVDLSKTKKKKKQLTKGEFEIYDVNLSNDKNHFYF 451

Query: 364 TKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                S     +  +   G +   L  D        +P    +   RK       +LY +
Sbjct: 452 LANPESPGIRNLYKLPVSGGKMEQLTSDKGGMEYALAPDESKIA-IRKSTAAQPWELYVM 510

Query: 422 D 422
           D
Sbjct: 511 D 511


>gi|294627750|ref|ZP_06706332.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598102|gb|EFF42257.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 844

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 85/253 (33%), Gaps = 26/253 (10%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRF 219
           DI +    E      RI   + +       + L ++   DG+  +         L +  +
Sbjct: 90  DIAEVAQPELKLAGLRIHPKTFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSW 149

Query: 220 SPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQ 277
           SP+Q+ +A+   D       ++L+D    +A + +     S+    R+  +    L+  Q
Sbjct: 150 SPDQRHLAFRREDAASGANELWLVDVAAGQARRLVAGLNTSVNDDVRWLPDSSGLLLQQQ 209

Query: 278 KDEAMDIYSVDLQ-SNATERLTNTLFINIS-ASYSP----DSSQIVFESDREGKEQLYVM 331
                   S D   +    + T+      S  +Y      ++   VFE    G+  +  +
Sbjct: 210 VAGQGTPPSRDATPTGPATQQTSAAAGVRSLPTYQDLLRNEADARVFEYYATGQPIIVTV 269

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIGVMKKDG 380
                  + I+      Y +   SP G  I  ++ S   F            I V+   G
Sbjct: 270 A---GQVRPIAT--PGIYLNLSVSPDGRYIL-SERSERPFSYLVPVDNFARRIEVLDLQG 323

Query: 381 SQERLLVEDSNLQ 393
              R + +   ++
Sbjct: 324 KLVRQIAQLPLVE 336



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 73/219 (33%), Gaps = 15/219 (6%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQ--KDEAMD 283
            +A        +++L+        +  G    + LA   +S + +      +     A +
Sbjct: 110 TFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASGANE 169

Query: 284 IYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKR 340
           ++ VD+ +    RL   L   +N    + PDSS ++ +    G+       +       +
Sbjct: 170 LWLVDVAAGQARRLVAGLNTSVNDDVRWLPDSSGLLLQQQVAGQGTPPSRDATPTGPATQ 229

Query: 341 ISQDKEASYFDPVWSP----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +         P +      + D   F  ++  +  I  +     Q R +         +
Sbjct: 230 QTSAAAGVRSLPTYQDLLRNEADARVFEYYATGQPIIVTVA---GQVRPIATPGIYLNLS 286

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            SP GR ++   ++     S L  +D   R   +++   
Sbjct: 287 VSPDGRYIL--SERSERPFSYLVPVDNFARRIEVLDLQG 323



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 5/72 (6%)

Query: 378 KDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            DGS+ ++  L    +L   +WSP  R L F R+      ++L+ +D+       +    
Sbjct: 128 ADGSERQIAGLPSPLSLADLSWSPDQRHLAFRREDAASGANELWLVDVAAGQARRLVAGL 187

Query: 436 YAS---DPQWVG 444
             S   D +W+ 
Sbjct: 188 NTSVNDDVRWLP 199


>gi|255693296|ref|ZP_05416971.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           finegoldii DSM 17565]
 gi|260620975|gb|EEX43846.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           finegoldii DSM 17565]
          Length = 785

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 60/157 (38%), Gaps = 16/157 (10%)

Query: 265 FSSNGKRALISV--QKDEAMDIYSVDLQSNATERLT---NTLFINISA---SYSPDSSQI 316
            S +GKR       +     DI  VD+++     +    N  +++      S+  D  +I
Sbjct: 299 VSGDGKRLYFQRYNRTWNQADICEVDVETGKVRVVIHEENKPYLDYQMRNVSFLNDGKEI 358

Query: 317 VFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEK----- 370
           +F S+R G    Y+  +   + K +++     +            I F  +  EK     
Sbjct: 359 LFRSERNGWGHYYLYDTATGNLKNQVTDGTWVAGPIAKIDTVRRKIYFYGYGREKEIDPY 418

Query: 371 -FAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLI 405
            + +   + D S   RLL  ++     + SPS R L+
Sbjct: 419 YYILYEAQLDRSNTLRLLTSENASHEVSISPSCRYLV 455



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 50/126 (39%), Gaps = 12/126 (9%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSG--EKFAIGVMKKDGS 381
            +L +   +  + K+I  ++    +  V   S  G  + F +++    +  I  +  +  
Sbjct: 269 YELLIGDVDSREVKKIDINRWPDQYIDVLYVSGDGKRLYFQRYNRTWNQADICEVDVETG 328

Query: 382 QERLLVE-------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           + R+++        D  ++  ++   G+ ++F  +++G     LY     G  +  +   
Sbjct: 329 KVRVVIHEENKPYLDYQMRNVSFLNDGKEILFRSERNGWGHYYLYDT-ATGNLKNQVTDG 387

Query: 435 AYASDP 440
            + + P
Sbjct: 388 TWVAGP 393


>gi|125556318|gb|EAZ01924.1| hypothetical protein OsI_23950 [Oryza sativa Indica Group]
 gi|222636007|gb|EEE66139.1| hypothetical protein OsJ_22200 [Oryza sativa Japonica Group]
          Length = 326

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 79/266 (29%), Gaps = 31/266 (11%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S      L  +  D  N   +       + + +++ +  ++  A+ D      V + D 
Sbjct: 54  GSHDKDIFLWYVHGDCKNY-MVLRGHKNAVLDLQWTTDGTQIISASPDK----TVRVWDV 108

Query: 245 RIDRAPKRIGNFRSMILA--PR--FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              +  K++    S + +  P   +       ++S   D    ++  DL+     +    
Sbjct: 109 ETGKQVKKMAEHSSFVNSCCPARKWPP----LVVSGSDDGTAKLW--DLRQRGAIQTLPD 162

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +   + S+S  + + VF    +    +       ++     +  +        SP G  
Sbjct: 163 KYQITAVSFSEAADK-VFTGGLD--NDVKWWDLRKNEVTEYLKGHQDMITGMQLSPDGSY 219

Query: 361 IAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDGD 413
           +       E   + +     +    + L    +         +WSP  R +       G 
Sbjct: 220 LLTNAMDNELKIWDLRPYAPENRNIKTLTGHQHNFEKNLLKCSWSPDNRKV-----TAGS 274

Query: 414 TGSKLYSIDLNGRNETLINTPAYASD 439
               +Y  D   R   L   P +   
Sbjct: 275 ADRMVYIWDTTSR-RILYKLPGHNGS 299


>gi|20091936|ref|NP_618011.1| surface antigen gene [Methanosarcina acetivorans C2A]
 gi|19917137|gb|AAM06491.1| surface antigen gene [Methanosarcina acetivorans C2A]
          Length = 344

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 73/209 (34%), Gaps = 8/209 (3%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +T       +   +V+          ++ V+D    N+    P           +P   K
Sbjct: 31  LTFAGVAGAAPFAYVTNIGDYDQRGPNVAVIDTATNNVTVRVPLGGGWPVGVAVNPAGTK 90

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +     D      VY++DT  ++   ++    S      F+  G R  ++ Q D   DI+
Sbjct: 91  I--YVVDSPSDSTVYVIDTATNKVSAKVNLGSSYPARITFNPAGTRVYVTKQHD-YPDIF 147

Query: 286 SVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
            ++  +N     +        S +++PD  +I   +       +YV+ +  +        
Sbjct: 148 VINPATNTLMAPIIVGPST-YSIAFTPDGKKIYAANCN--NNTIYVIDATTNKVTANISV 204

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            ++ Y + V +P G  +       +  ++
Sbjct: 205 GDSPY-ELVVTPDGKKVYVANAESDNVSV 232



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/160 (11%), Positives = 57/160 (35%), Gaps = 8/160 (5%)

Query: 281 AMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             ++  +D  +N    R+       +  + +P  ++I +  D      +YV+ +  +   
Sbjct: 55  GPNVAVIDTATNNVTVRVPLGGGWPVGVAVNPAGTKI-YVVDSPSDSTVYVIDTATNKVS 113

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWS 398
                  +      ++P G  + +     +   I V+    +     ++   +  +  ++
Sbjct: 114 AKVNLGSSYPARITFNPAGTRV-YVTKQHDYPDIFVINPATNTLMAPIIVGPSTYSIAFT 172

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           P G+ + ++   + +T   +Y ID      T   +   + 
Sbjct: 173 PDGKKI-YAANCNNNT---IYVIDATTNKVTANISVGDSP 208


>gi|86130800|ref|ZP_01049399.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85818211|gb|EAQ39371.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 632

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 57/168 (33%), Gaps = 42/168 (25%)

Query: 297 LTNTLFINISASYSPDSS-----QIVFESDREGKEQ-----------LYVMQSNG---SD 337
           +TN+  +N S  Y+   S      + F S R    +           +Y    +G     
Sbjct: 149 VTNSGALNTS--YADYGSAVSNNTLYFASARNTNRKKHNLNDEPFLDIYTATLDGSKLGT 206

Query: 338 QKRISQDKEASYFDP--VWSPQGDLIAFTKFSG------------EKFAIGVMKKDGSQE 383
              ++ D    Y +     SP G  + F +                +  +   +K G + 
Sbjct: 207 ASLLTGDVNTKYHEGKVAISPDGKRMYFDRNDYYKGDLDKDEAGVNQINLYTAEKVGGEW 266

Query: 384 RLL------VEDSNLQAPTWSPSGRSLIFSRKK-DGDTGSKLYSIDLN 424
             +       ++ +   P  SP G +L FS  +  G  GS LY + +N
Sbjct: 267 VNVQSAPFNSDEFSTGHPAISPDGNTLYFSSDRPGGKGGSDLYMVAVN 314



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 59/193 (30%), Gaps = 33/193 (17%)

Query: 218 RFSPNQQKVAYATYDD------EDILRVYLMDTRIDRAP------KRIGNFRSMILA--- 262
             SP+ +++ +   D       +D   V  ++              +   F S   +   
Sbjct: 224 AISPDGKRMYFDRNDYYKGDLDKDEAGVNQINLYTAEKVGGEWVNVQSAPFNSDEFSTGH 283

Query: 263 PRFSSNGKRALISVQKD---EAMDIYSV----DLQSNATERL---TNTLFINISASYSPD 312
           P  S +G     S  +       D+Y V    D        L    NT    +    + D
Sbjct: 284 PAISPDGNTLYFSSDRPGGKGGSDLYMVAVNKDGTFGTPTALKNQINTEGTEVFPFIAQD 343

Query: 313 SSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            + + F SD     G   +++ +S G++    +     +    + SP  D   +     +
Sbjct: 344 GT-LYFSSDGHMGMGGLDVFMSESKGAN----TYAIPQNAGTGINSPADDFSIYINQDTD 398

Query: 370 KFAIGVMKKDGSQ 382
              I   +  G  
Sbjct: 399 TGFISSNRAGGKG 411



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 62/191 (32%), Gaps = 53/191 (27%)

Query: 264 RFSSNGKRALI--------SVQKDEA----MDIYSVDLQSNATERLTNTLFINIS----- 306
             S +GKR            + KDEA    +++Y+ +        + +  F +       
Sbjct: 224 AISPDGKRMYFDRNDYYKGDLDKDEAGVNQINLYTAEKVGGEWVNVQSAPFNSDEFSTGH 283

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            + SPD + + F SDR G +        GSD   ++ +K+ ++  P              
Sbjct: 284 PAISPDGNTLYFSSDRPGGK-------GGSDLYMVAVNKDGTFGTP-------------- 322

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-GDTGSKLYSIDLNG 425
                         + +  +  +     P  +  G  L FS     G  G  ++  +  G
Sbjct: 323 -------------TALKNQINTEGTEVFPFIAQDGT-LYFSSDGHMGMGGLDVFMSESKG 368

Query: 426 RNETLINTPAY 436
            N   I   A 
Sbjct: 369 ANTYAIPQNAG 379


>gi|332707021|ref|ZP_08427081.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lyngbya
           majuscula 3L]
 gi|332354286|gb|EGJ33766.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lyngbya
           majuscula 3L]
          Length = 645

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 22/179 (12%)

Query: 275 SVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKE-----QL 328
           +V  +    + S+ L++    + L +      S   SPD S++ + S           QL
Sbjct: 142 TVDGEPVNTLVSISLENGEDIQVLASGCDFYSSPRLSPDCSKLAWLSWNHPNMPWDVTQL 201

Query: 329 YVMQ--SNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +V    ++G     + I+   + S F P WSP G ++ F       + +   +    +  
Sbjct: 202 WVAPILTDGSLGVAELIAGGVDESVFQPEWSPDG-VLYFVCDRTNWWNLYRWQPTRGEIE 260

Query: 385 LLVE-DSNLQAPTW----SPSG----RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            L E ++    P W    S  G      +I +  ++G+    L SIDLN + +++I TP
Sbjct: 261 PLCEMEAEFGLPQWVFGMSTYGFDGANRIICTYTQEGNW--HLASIDLNTKQQSVIATP 317



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 57/188 (30%), Gaps = 34/188 (18%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-----MD 283
            T D E +  +  +        + + +      +PR S +  +                 
Sbjct: 141 HTVDGEPVNTLVSISLENGEDIQVLASGCDFYSSPRLSPDCSKLAWLSWNHPNMPWDVTQ 200

Query: 284 IYSVDLQSNATERLTNTL---------FINIS---ASYSPDSSQIVFESDREGKEQLYVM 331
           ++   +       LT+            ++ S     +SPD   + F  DR     LY  
Sbjct: 201 LWVAPI-------LTDGSLGVAELIAGGVDESVFQPEWSPDG-VLYFVCDRTNWWNLYRW 252

Query: 332 QSNGSDQKRISQDKEASYFDPVW----SPQG----DLIAFTKFSGEKFAIGVMKKDGSQE 383
           Q    + + +  + EA +  P W    S  G    + I  T      + +  +  +  Q+
Sbjct: 253 QPTRGEIEPL-CEMEAEFGLPQWVFGMSTYGFDGANRIICTYTQEGNWHLASIDLNTKQQ 311

Query: 384 RLLVEDSN 391
            ++     
Sbjct: 312 SVIATPYT 319



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 18/161 (11%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR--------VYLMDTRIDRAP 250
           +G +I+ +  S       PR SP+  K+A+ +++  ++            L D  +  A 
Sbjct: 158 NGEDIQ-VLASGCDFYSSPRLSPDCSKLAWLSWNHPNMPWDVTQLWVAPILTDGSLGVAE 216

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY- 309
              G     +  P +S +G        +    ++Y         E L           + 
Sbjct: 217 LIAGGVDESVFQPEWSPDG-VLYFVCDRTNWWNLYRWQPTRGEIEPLCEMEAEFGLPQWV 275

Query: 310 -------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                     +++I+    +EG   L  +  N   Q  I+ 
Sbjct: 276 FGMSTYGFDGANRIICTYTQEGNWHLASIDLNTKQQSVIAT 316



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 43/136 (31%), Gaps = 13/136 (9%)

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AI 373
             D E    L  +     +  ++       Y  P  SP    +A+  ++          +
Sbjct: 142 TVDGEPVNTLVSISLENGEDIQVLASGCDFYSSPRLSPDCSKLAWLSWNHPNMPWDVTQL 201

Query: 374 GV--MKKDGS-QERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            V  +  DGS     L+     ++   P WSP G  L F   +        +     G  
Sbjct: 202 WVAPILTDGSLGVAELIAGGVDESVFQPEWSPDG-VLYFVCDRTNWWNLYRWQ-PTRGEI 259

Query: 428 ETLINTPAYASDPQWV 443
           E L    A    PQWV
Sbjct: 260 EPLCEMEAEFGLPQWV 275


>gi|325104568|ref|YP_004274222.1| hypothetical protein Pedsa_1845 [Pedobacter saltans DSM 12145]
 gi|324973416|gb|ADY52400.1| hypothetical protein Pedsa_1845 [Pedobacter saltans DSM 12145]
          Length = 948

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 82/224 (36%), Gaps = 13/224 (5%)

Query: 160 DDIYQSITGEKG-------DFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRD 211
           D+I Q IT             N +I +          K +   ++  +    ++ T ++ 
Sbjct: 341 DNIEQKITSIGPQLENNFSYANGKITWDEYRQDERYGKRTYNEINIYNLHTKKHSTLTKR 400

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGK 270
              F P  S + + +A+ + DD     +  +        +    F   IL  P +S +GK
Sbjct: 401 SKSFSPALSKDGKNIAFVSVDDSGDFNLKEISLDQKITERAFPKFEGYILQTPSYSKDGK 460

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLY 329
           + +++   ++   I   D       +L      +     ++ +   I++++   G E ++
Sbjct: 461 KVVVTGVNEKGKTILIYDKDKQLWTKLFEEERQLISRPIFALNG--ILYKAHYTGVENIF 518

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                   + +IS  +  +    + + + D I F  +  + + I
Sbjct: 519 YFDLEKKKKYQISNSEFGATNASLVNSE-DEILFNDYQADGYNI 561



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 59/149 (39%), Gaps = 22/149 (14%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDRE----GK---EQLYVMQSNGSDQKRI 341
           L  N  +++T ++   +  ++S  + +I ++  R+    GK    ++ +   +      +
Sbjct: 339 LHDNIEQKIT-SIGPQLENNFSYANGKITWDEYRQDERYGKRTYNEINIYNLHTKKHSTL 397

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQA------ 394
           ++  ++  F P  S  G  IAF        F +  +  D    + + E +  +       
Sbjct: 398 TKRSKS--FSPALSKDGKNIAFVSVDDSGDFNLKEISLD----QKITERAFPKFEGYILQ 451

Query: 395 -PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            P++S  G+ ++ +   +      +Y  D
Sbjct: 452 TPSYSKDGKKVVVTGVNEKGKTILIYDKD 480


>gi|154246074|ref|YP_001417032.1| WD-40 repeat-containing protein [Xanthobacter autotrophicus Py2]
 gi|154160159|gb|ABS67375.1| WD-40 repeat protein [Xanthobacter autotrophicus Py2]
          Length = 343

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 51/279 (18%), Positives = 99/279 (35%), Gaps = 20/279 (7%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           GK+  +     + +    SD   + + G+KG +  R+    + VV+     +  V+   G
Sbjct: 77  GKRLVTGGDDGQVMETR-SDGSTRVLAGQKGRWIDRVALGPDGVVAWSAGKTAHVLPAKG 135

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            +     PS    L    F+P   ++A A Y       V L       A   +  ++   
Sbjct: 136 ESKSLDVPSTVGGL---AFAPKGLRLAVAHYGG-----VTLWFPNAAAAKPELFGWKGSH 187

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           L   FS +G+  + ++Q+        VD    A  R+T       S +++ D   +   +
Sbjct: 188 LGVVFSPDGRFLVTTMQEPALHGWRVVD---GAHMRMTGYPSRVKSFAFTADGKWLA--T 242

Query: 321 DREGKEQLYVMQSN----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              G+  L+  Q+     G +   ++             P+  ++      G    + + 
Sbjct: 243 SGSGEAILWPFQAKDGPMGKEPSMLAPSPTTRVTVVSPHPKDPVVGIGYEDGMVMMVRIT 302

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                  R    D+ + A  W PSG ++ F   + G  G
Sbjct: 303 DAAEILLRAPDSDA-VSAMAWHPSGGAVAFGT-QGGKGG 339


>gi|293611379|ref|ZP_06693675.1| predicted protein [Acinetobacter sp. SH024]
 gi|292826251|gb|EFF84620.1| predicted protein [Acinetobacter sp. SH024]
          Length = 339

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/244 (17%), Positives = 83/244 (34%), Gaps = 23/244 (9%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDIL--RVYLMDTRIDRAPKRIGNFR-SMILAPRFSSN 268
                P F     K+ +  Y D +    ++YL +    +      N++   ++   FS +
Sbjct: 53  HAAIAPTF---YGKLVFHRYSDYEAWDSKLYLYNFTTQQTTLLGANWKIDHMMNGHFSPD 109

Query: 269 GKRALISVQKDE-----AMDIYSVDLQSNATE-RLTNTLF-INISASYSPDSSQIVFESD 321
           GK               A DIY   + S      LT      +    +  D+ +I+F   
Sbjct: 110 GKWLTFMGVNSGQHYGDAWDIYVWKVGSTELPINLTQGNNKRDEDPKFI-DNQRIIF--- 165

Query: 322 REGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +    L +++        ++Q+  +     P        I + K +G    I  + + G
Sbjct: 166 -KQNGDLKIIRMTDRTMTSVTQNGWDIEESMPYPMVNTTQILYAKGAGNNSRIFSIDQSG 224

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI---NTPAYA 437
           + +  L   ++   P W    R L        +   ++Y  D+  +  T +   NT    
Sbjct: 225 AYDTQLTNIASYY-PVWWQGSRFLYVRWYSPTNPHDQIYIYDMANKQTTRLPFNNTNYDT 283

Query: 438 SDPQ 441
           SDP 
Sbjct: 284 SDPA 287


>gi|288800022|ref|ZP_06405481.1| dipeptidyl-peptidase IV [Prevotella sp. oral taxon 299 str. F0039]
 gi|288333270|gb|EFC71749.1| dipeptidyl-peptidase IV [Prevotella sp. oral taxon 299 str. F0039]
          Length = 725

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 52/153 (33%), Gaps = 21/153 (13%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +     S D  Q++  S + G+    +   + +  ++I       +   + SP    +
Sbjct: 34  GTDQFTRISSDGKQVLQCSFKTGQTTAVLFDISKTIGEKI-----NGFDGYIMSPDRKRM 88

Query: 362 AFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                +   +         +     ++   L +    Q PTWSP G  + F R  +    
Sbjct: 89  LIQTKTEHIYRRSFKATYYIYTIASTKLEKLSDGDKQQVPTWSPDGNLIAFVRNNNIFLV 148

Query: 416 SKLY-----SIDLNGRNETLINTPAYASDPQWV 443
             LY     ++  +G+   +IN       P WV
Sbjct: 149 KLLYDNAESAVTADGKPNEIIN-----GIPDWV 176



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 64/164 (39%), Gaps = 29/164 (17%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES--- 320
           R SS+GK+ L    K         D+     E++            SPD  +++ ++   
Sbjct: 40  RISSDGKQVLQCSFKTGQTTAVLFDISKTIGEKINGFDGY----IMSPDRKRMLIQTKTE 95

Query: 321 ---DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
               R  K   Y+     +  +++S   +     P WSP G+LIAF + +     I ++K
Sbjct: 96  HIYRRSFKATYYIYTIASTKLEKLSDGDKQQV--PTWSPDGNLIAFVRNN----NIFLVK 149

Query: 378 K--DGSQERLLVEDSNLQ----APTW------SPSGRSLIFSRK 409
              D ++  +  +    +     P W      S + ++L+FS  
Sbjct: 150 LLYDNAESAVTADGKPNEIINGIPDWVNEEEFSHN-KALVFSAD 192


>gi|254292735|ref|YP_003058758.1| peptidase S9B dipeptidylpeptidase IV domain protein [Hirschia
           baltica ATCC 49814]
 gi|254041266|gb|ACT58061.1| peptidase S9B dipeptidylpeptidase IV domain protein [Hirschia
           baltica ATCC 49814]
          Length = 773

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 66/203 (32%), Gaps = 56/203 (27%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRID---------------------------RAP 250
           ++SP+  K+ +    ++D  R  L    +                            R  
Sbjct: 75  KYSPDGSKLTFLQAREDDRQRQDLWAYDVSTGQATMLVDSQLLEPEGFELSEEEKALRER 134

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISAS 308
           KRI     ++    +   G++ LI +      D+Y V L       ++LT T     +A 
Sbjct: 135 KRIAGTTGIVSY-DWDKRGEQILIPI----GGDLYVVKLTGATPEVQQLTATEAFEYNAE 189

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE------------------ASYF 350
            SP  + + F   R+G   LY +      + +IS D +                  + Y 
Sbjct: 190 ISPSGNTVSFI--RDGA--LYAINLASGKESQISPDADPDNAISYGVSEFVAQEEMSRYV 245

Query: 351 DPVWSPQGDLIAFTKFSGEKFAI 373
              WSP    I +T+       I
Sbjct: 246 GTWWSPDDKHIVYTRVDESTVDI 268



 Score = 36.9 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 25/215 (11%), Positives = 72/215 (33%), Gaps = 27/215 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + + Y   D+  +  +   D   +            ++  R+   G+   I   
Sbjct: 248 WWSPDDKHIVYTRVDESTVDIIPRFDIAANDVT---------VINQRYPRTGRPNAIV-- 296

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDREGKE-QLYVMQS 333
                D++  + Q+    ++      +      +++ ++S  +   +R+    ++  +  
Sbjct: 297 -----DVFVKNTQTGDVVQVALDASPDTYLVRVNWAGNNSLFIQRVNRDQTRLEMLQVDL 351

Query: 334 NGSDQKRISQDKEASYFD--PVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                +    +++ ++ +    ++    G  I +T        I +   DGS+   +   
Sbjct: 352 KTGSVREAYVEEQPNWINLSKDFNALENGGFI-WTTEESGYRHITLHNADGSKAHQVTSG 410

Query: 390 SNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSID 422
             +     +       + FS  KD    + LY   
Sbjct: 411 EWVVKSIEAVDEANGYVYFSANKDTPIETGLYRTS 445


>gi|254381522|ref|ZP_04996886.1| WD-40 repeat protein [Streptomyces sp. Mg1]
 gi|194340431|gb|EDX21397.1| WD-40 repeat protein [Streptomyces sp. Mg1]
          Length = 1522

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 63/358 (17%), Positives = 120/358 (33%), Gaps = 70/358 (19%)

Query: 130  LWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEKGDFNSRILFVSESVVSG 187
            LWDV +++         +P   R +A  +S D  ++ +   +      R+   S S   G
Sbjct: 1181 LWDVTNQESPRLLSRKPAPPPARGVAAALSPDGALFAATEADDHAEAGRLQLRSTSDPDG 1240

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI----LRVYLMD 243
                 L V D DG             +    FSP +  +A +    +        + + D
Sbjct: 1241 PP---LAVFDLDGG------------VGALAFSPTRPLLAVSARAGKQAGQSSPGIRIYD 1285

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRAL-------------ISVQKDEAMDIYSVDLQ 290
                RAP+ +G     +    FSS+G+                  ++  E +  + V   
Sbjct: 1286 VSNPRAPREVGRIEGDLSRITFSSDGQALTAEREFRDNEGDGDYRMELTERLQSWDVTDP 1345

Query: 291  SNATERLTNT---LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +   E  T +     +    ++ PD S +V      G  +L+ +QS+    + ++ +  +
Sbjct: 1346 ARPVELWTRSLPASGLGSDYAFRPDGSLLV--IHHSGLLRLWRVQSHQLIGEPVTVNVGS 1403

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--------------SNLQ 393
                  +SP G  +A T        +G+      +   L +                +  
Sbjct: 1404 DNGPLAFSPDGTHLALT----GTVRLGLSSITRPEIWDLTDPDAPVRESALPGQEYGSAY 1459

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDP----QWVGFM 446
            +  +SP  ++L          G  L+  D     E +I    A   DP    QW  ++
Sbjct: 1460 SLAFSPDSKTLA----VQTQWGVALWDTD----PERIIPGLCATVGDPITRQQWKRYL 1509


>gi|184158222|ref|YP_001846561.1| gluconolactonase [Acinetobacter baumannii ACICU]
 gi|332875769|ref|ZP_08443568.1| SMP-30/Gluconolaconase/LRE-like region [Acinetobacter baumannii
           6014059]
 gi|183209816|gb|ACC57214.1| Gluconolactonase [Acinetobacter baumannii ACICU]
 gi|322508543|gb|ADX03997.1| gluconolactonase [Acinetobacter baumannii 1656-2]
 gi|323518160|gb|ADX92541.1| gluconolactonase [Acinetobacter baumannii TCDC-AB0715]
 gi|332736033|gb|EGJ67061.1| SMP-30/Gluconolaconase/LRE-like region [Acinetobacter baumannii
           6014059]
          Length = 292

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 56/158 (35%), Gaps = 10/158 (6%)

Query: 193 LCVMDRDGANIRYLTPSRDQI----LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           L  +D +  N++++      +    L + R     + V  +    ED     L     D 
Sbjct: 75  LYQLDFETGNLKFICNPEPDLPQNRLNDGRVDRQGRFVFGSMNRLEDGNTASLYRLDADY 134

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +++ N  +   +  +S +G +   +      +  Y  DL++      T    I+ S  
Sbjct: 135 KIEKLENNINTSNSICWSPDGTKLYFADTWQGEIWSYDYDLETGQISNKTIFCKIDTSDG 194

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            S D S +    DREG   L+  +       R   D +
Sbjct: 195 GSADGSTV----DREGY--LWNAKVYSGQLVRYRPDGQ 226


>gi|158285326|ref|XP_564611.3| AGAP007626-PA [Anopheles gambiae str. PEST]
 gi|157019938|gb|EAL41742.3| AGAP007626-PA [Anopheles gambiae str. PEST]
          Length = 336

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 59/181 (32%), Gaps = 10/181 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S   K SL  ++  G   + L P   +      +SP+ + +A    D      + + D 
Sbjct: 151 GSHEGKISLYSVE-TGKAEQVLDPQNGKFTLSIAYSPDGKYIASGAIDG----IINIFDV 205

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  + +      + +  FS +  + L++   D  M +Y V   S+    L+      
Sbjct: 206 AAGKVAQTLEGHAMSVRSLCFSPD-SQMLLTASDDGHMKLYDV-AHSDVVGTLSGHASWV 263

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S S+S D       S     + + +             +     +   +SP    +   
Sbjct: 264 LSVSFSGDGKNFASSSS---DKTVKIWNVAERQCLHTFTEHADQVWGVRYSPDSANVISV 320

Query: 365 K 365
            
Sbjct: 321 S 321



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 72/203 (35%), Gaps = 18/203 (8%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           +    T   +D ++++ +     +   R         +++   S++G+    S   D ++
Sbjct: 57  RDFIVTGGVDDTVKIWDVLPDRSKFKLRNTFTGHSLGVVSVDVSTSGEVIA-SSSLDSSL 115

Query: 283 DIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            I+    ++     +++       + ++SP    I+  S      ++ +        +++
Sbjct: 116 CIWK--AETGQLMNQISVGPVDLWTVAFSPCDKYIISGSHEG---KISLYSVETGKAEQV 170

Query: 342 SQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WS 398
              +   +     +SP G  IA     G    I +      +    +E   +   +  +S
Sbjct: 171 LDPQNGKFTLSIAYSPDGKYIASGAIDG---IINIFDVAAGKVAQTLEGHAMSVRSLCFS 227

Query: 399 PSGRSLIFSRKKDGDTGSKLYSI 421
           P  + L+ +     D   KLY +
Sbjct: 228 PDSQMLLTASD---DGHMKLYDV 247


>gi|154311126|ref|XP_001554893.1| hypothetical protein BC1G_06681 [Botryotinia fuckeliana B05.10]
 gi|150851085|gb|EDN26278.1| hypothetical protein BC1G_06681 [Botryotinia fuckeliana B05.10]
          Length = 357

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 11/146 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISV 276
            +SP+   +A  + D      + L D    +  P  +    + + +  FS  G     S 
Sbjct: 12  AWSPDSNTIASGSDDK----VIRLWDRATGKPYPTPLLGHHNYVYSVAFSPKGNVIA-SG 66

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             DEA+ ++ +  +      L        +  +  D + +   S       + V  +   
Sbjct: 67  SYDEAVFLWDLRAR-RQMRSLPAHSDPVGAVDFIRDGTLVCSCST---DGLIRVWDTATG 122

Query: 337 DQKR-ISQDKEASYFDPVWSPQGDLI 361
              R +  +  A      +SP G  I
Sbjct: 123 QCLRTLVHEDNAPVTTVRFSPNGRYI 148



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 47/147 (31%), Gaps = 14/147 (9%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESD 321
            +S +      S   D+ + ++  D  +       L        S ++SP  + I   S 
Sbjct: 12  AWSPDSNTIA-SGSDDKVIRLW--DRATGKPYPTPLLGHHNYVYSVAFSPKGNVIASGSY 68

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               E +++       Q R             +   G L+      G    I V      
Sbjct: 69  ---DEAVFLWDLRARRQMRSLPAHSDPVGAVDFIRDGTLVCSCSTDG---LIRVWDTATG 122

Query: 382 Q-ERLLVEDSNLQA--PTWSPSGRSLI 405
           Q  R LV + N       +SP+GR ++
Sbjct: 123 QCLRTLVHEDNAPVTTVRFSPNGRYIL 149



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 50/139 (35%), Gaps = 10/139 (7%)

Query: 181 SESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           S ++ SG     + + DR  G             ++   FSP    +A  +YD+     V
Sbjct: 17  SNTIASGSDDKVIRLWDRATGKPYPTPLLGHHNYVYSVAFSPKGNVIASGSYDE----AV 72

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLT 298
           +L D R  R  + +      + A  F  +G   + S   D  + ++  D  +      L 
Sbjct: 73  FLWDLRARRQMRSLPAHSDPVGAVDFIRDGT-LVCSCSTDGLIRVW--DTATGQCLRTLV 129

Query: 299 N-TLFINISASYSPDSSQI 316
           +       +  +SP+   I
Sbjct: 130 HEDNAPVTTVRFSPNGRYI 148


>gi|154287100|ref|XP_001544345.1| hypothetical protein HCAG_01392 [Ajellomyces capsulatus NAm1]
 gi|150407986|gb|EDN03527.1| hypothetical protein HCAG_01392 [Ajellomyces capsulatus NAm1]
          Length = 841

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 83/250 (33%), Gaps = 25/250 (10%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   +   F+  +    + K  L     D   +R   P RD  L     S +   VA A+
Sbjct: 58  GIVATNDSFIMGAEDGTVWKYELETGQMDKLLVRCALPVRDLSL-----SKDGDWVAVAS 112

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               D L V +++       K + +    +    F  +G+   +S   D  + IYSVD  
Sbjct: 113 ----DELVVKIVNIHDMTIVKYLRDQSKGVKHVNFDPSGRYIAVSGS-DGIIYIYSVDGP 167

Query: 291 --------SNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
                        RL T+    +  A + PD+    F +    ++   V   +   Q   
Sbjct: 168 QPELVKKIDGIIGRLETDHEATSR-AVWHPDAR--AFAAVEPTRDIAIVSTRDWMKQNVF 224

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                A      WSP G L+A    +G    I + +          +  N+    W P  
Sbjct: 225 PAGHNADITALAWSPNGALLA---SAGADRQILLWETKTQNILRRYDIPNVINLAWHPVD 281

Query: 402 RSLIFSRKKD 411
            +L F+    
Sbjct: 282 NTLSFTTSDG 291


>gi|121719942|ref|XP_001276669.1| WD repeat protein [Aspergillus clavatus NRRL 1]
 gi|119404881|gb|EAW15243.1| WD repeat protein [Aspergillus clavatus NRRL 1]
          Length = 821

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 61/160 (38%), Gaps = 10/160 (6%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSL------CVMDRDGANIRYLTPSRDQILFEP 217
           ++ T       SR +  + +   G ++  +       V++ D     +         F  
Sbjct: 597 ETNTFIADHELSRAINCTATSPDGRLRVVIGDSPDAWVVEADTGRPVHPLRGHLDFGFAC 656

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + +A +  D      V + D R  +  +RI +  +   + RFS  G      + 
Sbjct: 657 AWSPDMRHIATSNQDK----TVIIWDARTWQILQRIESDVAGYRSVRFSPVGGGPRTLLL 712

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            + A  I  V+ Q+  + ++ +       A +SPD S I 
Sbjct: 713 AEPADRIAIVNAQTYQSRQVHDFFGEIGGADFSPDGSTIW 752



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 55/153 (35%), Gaps = 10/153 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +          D    ++++    R    +        A  +S + +    +  +D
Sbjct: 617 SPDGR----LRVVIGDSPDAWVVEADTGRPVHPLRGHLDFGFACAWSPDMRHIA-TSNQD 671

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           + + I+  D ++    +R+ + +    S  +SP           E  +++ ++ +     
Sbjct: 672 KTVIIW--DARTWQILQRIESDVAGYRSVRFSPVGGGPRTLLLAEPADRIAIVNAQTYQS 729

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +++  D         +SP G  I +   + E F
Sbjct: 730 RQV-HDFFGEIGGADFSPDGSTI-WVANTDEHF 760



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 5/100 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +  IN +A+ SPD    V   D       +V++++        +      F   WSP   
Sbjct: 608 SRAINCTAT-SPDGRLRVVIGD---SPDAWVVEADTGRPVHPLRGHLDFGFACAWSPDMR 663

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            IA T    +   I   +     +R+  + +  ++  +SP
Sbjct: 664 HIA-TSNQDKTVIIWDARTWQILQRIESDVAGYRSVRFSP 702


>gi|119183790|ref|XP_001242886.1| hypothetical protein CIMG_06782 [Coccidioides immitis RS]
          Length = 723

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 49/148 (33%), Gaps = 30/148 (20%)

Query: 310 SPDSSQIVFESD------------------REGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           SPD   + F S                    +G  +   + +         +    +   
Sbjct: 236 SPDGQTVAFMSKAPELPKANLTTSYIFVGPHDGSAEFTPINARDGPATP--EGVRGASTS 293

Query: 352 PVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAP---TWSPSGRS 403
           P +SP    IA+ +  GE +      I V     S     V +   ++P    W+ +GR+
Sbjct: 294 PKFSPDSKKIAYVQMHGENYESDRNIIYVATLGSSPSIRAVAEDWDRSPDSIQWTRNGRT 353

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           L F+ +  G    KL+S+       T  
Sbjct: 354 LYFTAEDRGTV--KLFSVSATAGRRTRP 379



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 45/145 (31%), Gaps = 24/145 (16%)

Query: 219 FSPNQQKVAYAT---------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            SP+ Q VA+ +               +                  P      R    +P
Sbjct: 235 ISPDGQTVAFMSKAPELPKANLTTSYIFVGPHDGSAEFTPINARDGPATPEGVRGASTSP 294

Query: 264 RFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISA---SYSPDSSQ 315
           +FS + K+        E  +     IY   L S+ + R       + S     ++ +   
Sbjct: 295 KFSPDSKKIAYVQMHGENYESDRNIIYVATLGSSPSIR-AVAEDWDRSPDSIQWTRNGRT 353

Query: 316 IVFESDREGKEQLYVMQSNGSDQKR 340
           + F ++  G  +L+ + +    + R
Sbjct: 354 LYFTAEDRGTVKLFSVSATAGRRTR 378



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 46/120 (38%), Gaps = 14/120 (11%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFE---------PRFSPNQQKVAYATYDDEDILR--- 238
           + + V   DG+       +RD              P+FSP+ +K+AY     E+      
Sbjct: 259 SYIFVGPHDGSAEFTPINARDGPATPEGVRGASTSPKFSPDSKKIAYVQMHGENYESDRN 318

Query: 239 -VYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            +Y+       + + +  ++     + +++ NG+    + +    + ++SV   +    R
Sbjct: 319 IIYVATLGSSPSIRAVAEDWDRSPDSIQWTRNGRTLYFTAEDRGTVKLFSVSATAGRRTR 378



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 48/158 (30%), Gaps = 31/158 (19%)

Query: 266 SSNGKRALISVQK------------------DEAMDIYSVDLQSNATERLTNTLFINISA 307
           S +G+      +                   D + +   ++ +             + S 
Sbjct: 236 SPDGQTVAFMSKAPELPKANLTTSYIFVGPHDGSAEFTPINARDGPATP-EGVRGASTSP 294

Query: 308 SYSPDSSQIVFE--------SDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQG 358
            +SPDS +I +         SDR     +YV     S   R +++D + S     W+  G
Sbjct: 295 KFSPDSKKIAYVQMHGENYESDR---NIIYVATLGSSPSIRAVAEDWDRSPDSIQWTRNG 351

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             + FT        +  +     +        N+ + +
Sbjct: 352 RTLYFTAEDRGTVKLFSVSATAGRRTRPRAMRNVGSVS 389


>gi|296121407|ref|YP_003629185.1| hypothetical protein Plim_1151 [Planctomyces limnophilus DSM 3776]
 gi|296013747|gb|ADG66986.1| protein of unknown function DUF1549 [Planctomyces limnophilus DSM
           3776]
          Length = 1737

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/242 (12%), Positives = 66/242 (27%), Gaps = 16/242 (6%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           ++D     +      + + +   RFSP+  +V     +        +  T          
Sbjct: 201 ILDSTTGAVVARLIGQSERIETVRFSPDGTRVLIVGGNPGRTGEFQIWKTADWSLETSAT 260

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPD 312
                +    +S +GK   +         + + +  +   + L      +      +S D
Sbjct: 261 VTFDTLYGGSWSPDGKLVAL---GGADNSVRAFNAATG-EQVLFQGAHSDWVRDTVFSKD 316

Query: 313 SSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEK 370
            S ++    D   K      Q    +   I+    +         P+ D I      G  
Sbjct: 317 GSHLISVGRDMTTKLTEVATQRFVDNVTSITPGALKGGIQAIARHPERDEIIVGGSDGIA 376

Query: 371 FAIGVMKKD----GSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               V +      G    L+         + +   SP G+    +   DG     +Y   
Sbjct: 377 RVYRVFRVTNRVIGDDANLIRHMPALPGRIFSVAVSPDGQRFAAASSLDGQGHWAIYDYT 436

Query: 423 LN 424
            +
Sbjct: 437 FD 438



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 62/206 (30%), Gaps = 16/206 (7%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            +++  + D  +R  ++ E          L + D+          SR  ++    +S + 
Sbjct: 135 PALSQVEIDLVTR--WIREGAKDDSPPAELRIFDQ----EHPPVYSRLPLITSLDYSKDG 188

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +  A + +       ++D+       R+      I   RFS +G R LI         
Sbjct: 189 KLLGVAGFHE-----ALILDSTTGAVVARLIGQSERIETVRFSPDGTRVLIVGGNPGRTG 243

Query: 284 IYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            + +      +     T T       S+SPD   +           +    +   +Q   
Sbjct: 244 EFQIWKTADWSLETSATVTFDTLYGGSWSPDGKLVALG---GADNSVRAFNAATGEQVLF 300

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFS 367
                    D V+S  G  +      
Sbjct: 301 QGAHSDWVRDTVFSKDGSHLISVGRD 326



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 100/336 (29%), Gaps = 65/336 (19%)

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWN----SLGAQVLVT------GRVIKEGK----DR 123
            F+            NP     FQ W     SL     VT      G    +GK      
Sbjct: 224 RFSP-DGTRVLIVGGNPGRTGEFQIWKTADWSLETSATVTFDTLYGGSWSPDGKLVALGG 282

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
                R ++    +Q++ +            AH  SD +  ++  + G      L     
Sbjct: 283 ADNSVRAFNAATGEQVLFQG-----------AH--SDWVRDTVFSKDGSH----LISVGR 325

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPS--RDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            ++  +         D  N+  +TP   +  I    R     + +   +     + RV+ 
Sbjct: 326 DMTTKLTEVATQRFVD--NVTSITPGALKGGIQAIARHPERDEIIVGGSDGIARVYRVFR 383

Query: 242 MDTRIDRA----PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +  R+        + +      I +   S +G+R   +   D        D         
Sbjct: 384 VTNRVIGDDANLIRHMPALPGRIFSVAVSPDGQRFAAASSLDGQGHWAIYD--------- 434

Query: 298 TNTLFINISASYSPDS----SQIVFESDREGKEQLYVMQSNGSDQKRISQD--KEASYFD 351
                 + S    PD     +Q V  S R  +E+  + +    + K ++Q    E+S + 
Sbjct: 435 ---YTFDTS---LPDDIKAINQKVVTS-RSAEEKEKLEKYLTLNTKVLAQGSLPESSLYT 487

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
             +SP G  +A     G    +  M     +     
Sbjct: 488 LAFSPDGQTLAIGGADG---LLRQMNATTGEPTKTF 520



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 30/104 (28%), Gaps = 7/104 (6%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  YS D   +       G  +  ++ S           +        +SP G  +   
Sbjct: 180 TSLDYSKDGKLL----GVAGFHEALILDSTTGAVVARLIGQSERIETVRFSPDGTRVLIV 235

Query: 365 KFSGEK---FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +  +   F I        +    V    L   +WSP G+ + 
Sbjct: 236 GGNPGRTGEFQIWKTADWSLETSATVTFDTLYGGSWSPDGKLVA 279


>gi|254420138|ref|ZP_05033862.1| Dipeptidyl peptidase IV N-terminal region domain protein
           [Brevundimonas sp. BAL3]
 gi|196186315|gb|EDX81291.1| Dipeptidyl peptidase IV N-terminal region domain protein
           [Brevundimonas sp. BAL3]
          Length = 749

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 60/225 (26%), Gaps = 59/225 (26%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +   G+  L  ++ D    I+          RLT T    I A  SP  + + +  D  
Sbjct: 118 SWDQQGRYILAPLEGD----IFLASRADGKVRRLTETAADEIDAKVSPKGNYVSWVRD-- 171

Query: 324 GKEQLYVMQSNGSDQKRISQDKEA----------------SYFDPVWSPQGDLIAFTKFS 367
             + L +       +  I+ D                         WSP    IA T+  
Sbjct: 172 --QNLVIYDLATGQETPITDDGAGLIAWATAEFIAQEEMDRDTGYWWSPDERYIALTRVD 229

Query: 368 GEKFAI------------------------------GVMKKDGSQERLLVEDSNLQA--- 394
                I                               V  +       +   SN      
Sbjct: 230 ESPVDIVPRFEITGAGATMVEQRYPRAGRPNALVELYVRDQQTGARVKVDLGSNTDIYLA 289

Query: 395 -PTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYA 437
              W+  G++L   R+        L S+D   G +  +++  A A
Sbjct: 290 RVDWADDGKTLYVQRQSRDQKTLDLLSVDPATGASRVILSQKAQA 334



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 66/210 (31%), Gaps = 62/210 (29%)

Query: 250 PKRIGNFRSMIL----APRFSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNTLF 302
           P+R+ +  S+          S +G+       +++     D+++         +L +   
Sbjct: 29  PERVFSSPSLNGPVAKGVSLSPDGQLVAFLRSREDNVDVQDLWAAPTGEGEPYKLIDARA 88

Query: 303 INISASYSPDSSQIV-------------------FESDREGKE-------QLYVMQSNGS 336
           +       PD+ ++                    +  D++G+         +++      
Sbjct: 89  L------VPDAGELSEAEKARRERMRISARGVVDYSWDQQGRYILAPLEGDIFLASRADG 142

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------ 390
             +R++ +  A   D   SP+G+ +++ +       + +      QE  + +D       
Sbjct: 143 KVRRLT-ETAADEIDAKVSPKGNYVSWVRDQ----NLVIYDLATGQETPITDDGAGLIAW 197

Query: 391 ------------NLQAPTWSPSGRSLIFSR 408
                             WSP  R +  +R
Sbjct: 198 ATAEFIAQEEMDRDTGYWWSPDERYIALTR 227



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 82/263 (31%), Gaps = 44/263 (16%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV-----MDRDGA 201
           +    R++  T +D+I   ++ +         +VS      ++   L       +  DGA
Sbjct: 140 ADGKVRRLTETAADEIDAKVSPKGN-------YVSWVRDQNLVIYDLATGQETPITDDGA 192

Query: 202 N------IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                    ++            +SP+++ +A    D+  +  V   +     A      
Sbjct: 193 GLIAWATAEFIAQEEMDRDTGYWWSPDERYIALTRVDESPVDIVPRFEITGAGATMVEQR 252

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPD 312
           +                  + + +  +++Y  D Q+ A  ++      +I  +   ++ D
Sbjct: 253 YPR----------------AGRPNALVELYVRDQQTGARVKVDLGSNTDIYLARVDWADD 296

Query: 313 SSQIVF--ESDREGKEQLYVMQSNGSDQKRISQDKEASY----FDPVWSPQGDLIAFTKF 366
              +    +S  +    L  +       + I   K  ++     D      G  I ++  
Sbjct: 297 GKTLYVQRQSRDQKTLDLLSVDPATGASRVILSQKAQAWVDLNNDFHVLADGRFI-WSNE 355

Query: 367 SGEKFAIGVMKKDGSQERLLVED 389
                 + +  ++G Q R +   
Sbjct: 356 DSGWRHLYLYDRNGRQLRAITRG 378


>gi|125975702|ref|YP_001039612.1| hypothetical protein Cthe_3224 [Clostridium thermocellum ATCC
           27405]
 gi|281416710|ref|ZP_06247730.1| hypothetical protein Cther_1348 [Clostridium thermocellum JW20]
 gi|125715927|gb|ABN54419.1| hypothetical protein Cthe_3224 [Clostridium thermocellum ATCC
           27405]
 gi|281408112|gb|EFB38370.1| hypothetical protein Cther_1348 [Clostridium thermocellum JW20]
          Length = 286

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 61/180 (33%), Gaps = 21/180 (11%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            N       +       ++  D  S    +L   +  +   S+     ++++    +  E
Sbjct: 123 PNSDSISFIL----GDALHIYDRSSGTLTKL-FKVAFDWY-SWDNTGKKLLYG---DYDE 173

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +Y+      ++K+I + +      PV+S   + IA+    G+   + V   +  +    
Sbjct: 174 NIYMYDMESKEEKKILEGR-----HPVYSNSNEYIAYM---GKDQKLTVYNVNTGENWRT 225

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKK---DGDTGSKLYSIDL-NGRNETLINTPAYASDPQW 442
           V   +     +SP  + ++   +           +Y++D   G+ + L           W
Sbjct: 226 VTIGSSTRYIFSPDDKYILLGTEYWDIVSIPHYIIYALDYKTGKKKRLFGGEGNVPSLDW 285


>gi|59802527|gb|AAX07507.1| WD-repeat protein [Gemmata sp. Wa1-1]
          Length = 181

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 11/125 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +    FS N   +   + D+       + D +     + +  +  ++ A  FS
Sbjct: 53  LKGHTKWVTSVAFSANGSWIVTGSLDN----TAKIWDAKTGTEVRTLNGYTGIVNAASFS 108

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREG 324
            +GKR + +   D  + ++ +   +   E LT         S S+S D SQIV  S  +G
Sbjct: 109 PDGKRIV-TGSADHMVKLWDI---TTGVEVLTLKGHTGAVTSVSFSLDGSQIVSTS-WDG 163

Query: 325 KEQLY 329
             +++
Sbjct: 164 TTKVW 168



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 41/115 (35%), Gaps = 7/115 (6%)

Query: 173 FNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           + + + F +    +V+G + N+  + D               I+    FSP+ +++   +
Sbjct: 59  WVTSVAFSANGSWIVTGSLDNTAKIWDAKTGTEVRTLNGYTGIVNAASFSPDGKRIVTGS 118

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            D      V L D         +      + +  FS +G + + S   D    ++
Sbjct: 119 ADH----MVKLWDITTGVEVLTLKGHTGAVTSVSFSLDGSQIV-STSWDGTTKVW 168



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/109 (13%), Positives = 32/109 (29%), Gaps = 8/109 (7%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++S + S IV  S         +  +    + R             +SP G  I   
Sbjct: 61  TSVAFSANGSWIVTGSL---DNTAKIWDAKTGTEVRTLNGYTGIVNAASFSPDGKRIVTG 117

Query: 365 KFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKD 411
                   + +       E L +      + + ++S  G  ++ +    
Sbjct: 118 SAD---HMVKLWDITTGVEVLTLKGHTGAVTSVSFSLDGSQIVSTSWDG 163


>gi|20090582|ref|NP_616657.1| cell surface protein [Methanosarcina acetivorans C2A]
 gi|19915615|gb|AAM05137.1| cell surface protein [Methanosarcina acetivorans C2A]
          Length = 411

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 71/171 (41%), Gaps = 22/171 (12%)

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQ-LYVMQSN 334
           K+    ++  DL +    +++N      S     D  +IV+ +D    G    +++   +
Sbjct: 144 KNRTYKVHMYDLSTFTRTQISNYGCHYGSPDIYED--RIVWANDSGFFGDSGPIWMYNVS 201

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
             ++ +   +   SY   ++   GD +   ++    + I +     ++       S + +
Sbjct: 202 TGNKTK--FETWYSYGCVIY---GDKLVSHEYGANYYCIVIYDLSTNEV------SGVNS 250

Query: 395 PT--WSPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           P+  + P   G  +++  +++    S +Y  D++  NET I+T   AS P 
Sbjct: 251 PSDPFDPDIYGDRVVWRDERN--CMSDIYMYDMSTANETRISTNGSASSPA 299



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 54/137 (39%), Gaps = 20/137 (14%)

Query: 298 TNTLFINISAS--YSPD--SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           TN +    S S  + PD    ++V+  +R     +Y+   + +++ RIS +  AS     
Sbjct: 242 TNEVSGVNSPSDPFDPDIYGDRVVWRDERNCMSDIYMYDMSTANETRISTNGSAS----- 296

Query: 354 WSP--QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS---LIFSR 408
            SP   G+ I +      + AI +     ++           A +    G+S   ++F+ 
Sbjct: 297 -SPAIYGNRIVWQDRRTNQSAIYMYDLS-AEPIKPQASFTANATS----GKSPLTVLFTD 350

Query: 409 KKDGDTGSKLYSIDLNG 425
              G T +  Y    +G
Sbjct: 351 TSTGGTPTSWYWDFGDG 367


>gi|24663767|ref|NP_648640.1| proteome of centrioles 1 [Drosophila melanogaster]
 gi|75027549|sp|Q9VU65|POC1_DROME RecName: Full=POC1 centriolar protein homolog; AltName:
           Full=Proteome of centrioles 1
 gi|7294482|gb|AAF49825.1| proteome of centrioles 1 [Drosophila melanogaster]
 gi|17862034|gb|AAL39494.1| LD05671p [Drosophila melanogaster]
          Length = 391

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 74/205 (36%), Gaps = 22/205 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S    +    +SP    VA A +D      V + + ++             + +  F 
Sbjct: 56  FASHSAPVNGVAWSPKGNLVASAGHDR----TVKIWEPKLRGVSGEFVAHSKAVRSVDFD 111

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF----INISASYSPDSSQIVFESDR 322
           S G   +++   D++  I+ V     A  +  ++         SA +SP+   +   SD 
Sbjct: 112 STG-HLMLTASDDKSAKIWRV-----ARRQFVSSFAQQNNWVRSAKFSPNGKLVATASD- 164

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              + + +   +  +  R   ++ A+     W P G+++A          I +    GSQ
Sbjct: 165 --DKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWGNMLAVALGCN---RIKIFDVSGSQ 219

Query: 383 ERLL--VEDSNLQAPTWSPSGRSLI 405
              L  V  + +    + PSG  L+
Sbjct: 220 LLQLYVVHSAPVNDVAFHPSGHFLL 244



 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 50/170 (29%), Gaps = 47/170 (27%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
               T          + PD +QI   S  +    L+ +       +       A      
Sbjct: 11  ERHFTGHSGGITQLRFGPDGAQIA-TSSTDSTVILWNLNQAARCIR--FASHSAPVNGVA 67

Query: 354 WSPQGDLIAFTKFS-------------GEKF-----AIGVMKKDGSQERLLVEDSN---- 391
           WSP+G+L+A                    +F     A+  +  D +   +L    +    
Sbjct: 68  WSPKGNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKAVRSVDFDSTGHLMLTASDDKSAK 127

Query: 392 -------------------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                              +++  +SP+G+ +  +     D   ++Y +D
Sbjct: 128 IWRVARRQFVSSFAQQNNWVRSAKFSPNGKLVATASD---DKSVRIYDVD 174


>gi|327194213|gb|EGE61077.1| putative adenylate class-3/4/guanylyl cyclase [Rhizobium etli
           CNPAF512]
          Length = 720

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 16/129 (12%)

Query: 43  ANYSPVSIAFTKFVSIDELGGK-----VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI 97
            +    SIA   F ++ +         +++ +  DL R   F++IS++S       P  +
Sbjct: 211 PHKQRTSIAVLPFANLSDQTQDYFADGITDNLITDLARLSKFDVISENSVFAYKDKPHVL 270

Query: 98  PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW------ 151
              +    LG + +V G V + G D +RV  +L D +    +   +F  S A        
Sbjct: 271 ADIR--RDLGVRYIVEGSVQRMG-DLMRVNAQLVDTESGDHLWANRFDRSGADVFAVQDS 327

Query: 152 --RKIAHTI 158
             R+IAH +
Sbjct: 328 MSRQIAHAL 336


>gi|113474087|ref|YP_720148.1| WD-40 repeat-containing serine/threonine protein kinase
           [Trichodesmium erythraeum IMS101]
 gi|110165135|gb|ABG49675.1| serine/threonine protein kinase with WD40 repeats [Trichodesmium
           erythraeum IMS101]
          Length = 608

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/201 (16%), Positives = 62/201 (30%), Gaps = 28/201 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRAL 273
            F  + Q V        +   + +        P+ +G    +    + A  FS +G+   
Sbjct: 326 AFGIDGQTVV----SGGEDNNIKVWTLGTGNEPQTLGGWMFSHSGWVQAIVFSPDGQTL- 380

Query: 274 ISVQKDEAMDIYSVDLQSNATER-LTNTLFINISA----SYSPDSSQIVFESDREGKEQ- 327
           IS   D  + I+  +L +    R L         A    + S D   +       G    
Sbjct: 381 ISGSNDGTLKIW--NLGTGKLVRTLKGWFGQEWGAVHAIAISQDGQILA-----SGHNDK 433

Query: 328 -LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--R 384
            + V        +   Q   A       S  G ++A    SG+K  I +      +    
Sbjct: 434 TVKVWYLASGKMRGFLQGHTAWVESLAISLDGKVLA--SGSGDKM-IKLWDVQTGKLLFN 490

Query: 385 LLVEDSNLQAPTWSPSGRSLI 405
           L      +++   +P G+ L 
Sbjct: 491 LTGHSDVVRSVAIAPDGQILA 511


>gi|297203531|ref|ZP_06920928.1| acyl-peptide hydrolase [Streptomyces sviceus ATCC 29083]
 gi|197714508|gb|EDY58542.1| acyl-peptide hydrolase [Streptomyces sviceus ATCC 29083]
          Length = 665

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 73/224 (32%), Gaps = 34/224 (15%)

Query: 190 KNSLCVMDRDGANI------RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR----- 238
           +  L  +  DG+ +      R LT  R + +  PR S +  + A+  +D   +       
Sbjct: 158 RRVLAAVPLDGSAVQDRDAVRELTDDRHRFVTGPRISSDGSRAAWLAWDHPRMPWDGTEL 217

Query: 239 -VYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKDEAMDIYSVDLQ------ 290
            V  +     R P+ +       +A   ++ +G R L +  +    ++Y  D +      
Sbjct: 218 VVAEVLGGTLREPRTVAGGPEESIAQADWAPDG-RLLYASDRTGWWNLYR-DGEQLCPRE 275

Query: 291 ---SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                A  +L +         ++P  + ++      G   L ++     +   +      
Sbjct: 276 EEFGGALWKLGHRW-------FAPLDNGLIAVVHGTGSTALGILDPETGEL--VDAAGPW 326

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           + F P  +  G+ I     S    A  V++ D            
Sbjct: 327 TEFAPTLAVHGERIVAVGASPRT-AYEVVELDTLPHARTTSRGG 369


>gi|13541726|ref|NP_111414.1| Tricorn protease [Thermoplasma volcanium GSS1]
 gi|20140383|sp|Q97A95|TRI_THEVO RecName: Full=Tricorn protease
 gi|14325132|dbj|BAB60057.1| tricorn protease [Thermoplasma volcanium GSS1]
          Length = 1030

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 54/168 (32%), Gaps = 14/168 (8%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+   KD    I   D  +   +R    L    S   S D   +V  +D     Q+ ++ 
Sbjct: 337 LVIGDKDG-DSIGVFDAGTGEMKRKIGPLGNIFSVKSSADGKYLVVGND---NFQILLID 392

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---------KFSGEKFAIGVMKKDGSQE 383
            +    K I Q +E    D   S     IA++          +      +  M  D    
Sbjct: 393 VSNGTVKEIDQSREGLIVDFAISKDSRFIAYSFPVKSSDLASYVQRHIKLFDMLND-KHY 451

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +  E +N  AP +      L +   +  D  +  ++ +    N T  
Sbjct: 452 DVTTETANDFAPAFDADTNYLYYLSNRSLDPSTDRFTFNFGYLNITRP 499



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 15/107 (14%)

Query: 267 SN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SD 321
            +  G R L +       +++   L +   +RLT+ L +  +A Y  + +++VF      
Sbjct: 8   PDIYGDRILFTCC----DELWEYSLSTGEKKRLTSHLGVVNNARYYDNGTKVVFRVMFGQ 63

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPV------WSPQGDLIA 362
                 L+ +     + KR++     S           +S  G +I 
Sbjct: 64  SLDAADLFSIDLKSGELKRLTFITGKSVGRRKFTDVAGFSKDGSIIV 110



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 71/221 (32%), Gaps = 28/221 (12%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-- 221
           +  T   G      + VS           L  +  DG        S D +   P      
Sbjct: 94  RKFTDVAGFSKDGSIIVSTDAFQPFSVPMLYKLGDDG--------SLDPLNLGPAVHYIE 145

Query: 222 -NQQ----KVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            N +    +  Y      + +   R  +    I++  K+I +  + I  P    +  R  
Sbjct: 146 KNGRIYIGRDTYDLPHWKEYKGGTRGKIWSGTIEKGFKKIIDLENHISCPVIVKD--RIY 203

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQ 332
                D A +IYS +L  N  ++ T+  F        + D   IVF     G   +Y   
Sbjct: 204 FITDIDGAGNIYSTNLDGNDLKKHTD--FHEYYPRHLNTDGKTIVFS--MGG--DIYTFD 257

Query: 333 SNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFA 372
               + K +       +  +  ++P   L  F+   G+ ++
Sbjct: 258 PTNDNVKSLDIGPVFDTDLNQSYAPSKFLEDFSMSPGDMYS 298


>gi|194225819|ref|XP_001500674.2| PREDICTED: similar to LOC787677 protein [Equus caballus]
          Length = 337

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 50/164 (30%), Gaps = 8/164 (4%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
            T      K     R  + +  FS +G+  L +  +D  +  +          RL     
Sbjct: 7   GTLAVGRVKFFSRHRGEVNSSAFSPDGQTLL-TASEDGCVYGWETQ-SGRLLWRLGGHTG 64

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +SPD       S       + +     +   ++ +  + S     +SP    +A
Sbjct: 65  PVKFCRFSPDGRLFASTSC---DCTIRLWDVAEAKCLQVLKGHQRSVETVSFSPDSKQLA 121

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
              +        V    G   R L    + +Q+  ++PS   L 
Sbjct: 122 SGGWDKRVMLWEVQS--GHVLRHLAGHRDSVQSSEFAPSSDCLA 163



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 67/183 (36%), Gaps = 13/183 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++ +  R ++     FSP+ Q +  A+ D      VY  +T+  R   R+G     +
Sbjct: 12  GRVKFFSRHRGEVNSS-AFSPDGQTLLTASEDG----CVYGWETQSGRLLWRLGGHTGPV 66

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
              RFS +G R   S   D  + ++ V  ++   + L        + S+SPDS Q+    
Sbjct: 67  KFCRFSPDG-RLFASTSCDCTIRLWDV-AEAKCLQVLKGHQRSVETVSFSPDSKQLA--- 121

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                +++ + +       R       S     ++P  D +A   +      I +     
Sbjct: 122 SGGWDKRVMLWEVQSGHVLRHLAGHRDSVQSSEFAPSSDCLATGSWDAT---IRIWDLRT 178

Query: 381 SQE 383
              
Sbjct: 179 GTP 181



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 76/225 (33%), Gaps = 19/225 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D   A    +     + +    FSP+ +++A   +D     RV L + +
Sbjct: 80  STSCDCTIRLWDVAEAKCLQVLKGHQRSVETVSFSPDSKQLASGGWDK----RVMLWEVQ 135

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLF 302
                + +   R  + +  F+ +      +   D  + I+  DL++   E    L     
Sbjct: 136 SGHVLRHLAGHRDSVQSSEFAPSSDCLA-TGSWDATIRIW--DLRTGTPEVYQELEGHSG 192

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 YS         +     + +++ + +        +          +SP G  +A
Sbjct: 193 NISCLCYSASG----LLASGSWDKTIHIWKPSTRSLLLQLKGHVTWVKSITFSPDGLQLA 248

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
               +G    + V   +  +    ++       A T++P GR L+
Sbjct: 249 ---SAGYSRMVKVWDCNTGKCMETLKGVLDVAHACTFTPDGRLLV 290



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 58/192 (30%), Gaps = 34/192 (17%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    R+WD++                          ++YQ + G  G+ +     
Sbjct: 163 ATGSWDATIRIWDLRTGT----------------------PEVYQELEGHSGNISCLCYS 200

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            S  + SG    ++ +      ++          +    FSP+  ++A A Y       V
Sbjct: 201 ASGLLASGSWDKTIHIWKPSTRSLLLQLKGHVTWVKSITFSPDGLQLASAGYSR----MV 256

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D    +  + +     +  A  F+ +G R L+    D+A              ++T 
Sbjct: 257 KVWDCNTGKCMETLKGVLDVAHACTFTPDG-RLLVCGAADQARRQV-------HRSQITQ 308

Query: 300 TLFINISASYSP 311
            L        +P
Sbjct: 309 ALSKMTPPRMAP 320


>gi|156048486|ref|XP_001590210.1| hypothetical protein SS1G_08974 [Sclerotinia sclerotiorum 1980]
 gi|154693371|gb|EDN93109.1| hypothetical protein SS1G_08974 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 748

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 55/157 (35%), Gaps = 23/157 (14%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    FSP+  K+A  + D      + L D     + + +      + +  
Sbjct: 615 QTLEGHSNSVSTVAFSPDGTKIASGSNDR----TIRLWDAITGESLQTLEGHSDWVRSVA 670

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G +   S   D  + ++   +   + + L N   +  S+++     +  F+S+   
Sbjct: 671 FSPDGTKIA-SGSNDRIIRLWDA-ITGESLQTLKNHSGLEASSAF-----ERYFKSNH-- 721

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               ++ + +  + + I       +  P + P    I
Sbjct: 722 ----WIAERSDEEVRNI------FWLPPDYRPNKLKI 748



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 47/138 (34%), Gaps = 7/138 (5%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           F+P    +   +       I ++    +    A + +    + +    FS +G +   S 
Sbjct: 581 FAPENSIIRKIFQKCIPSWIYKISRTRSNWSAALQTLEGHSNSVSTVAFSPDGTKIA-SG 639

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  + ++   +   + + L        S ++SPD ++I   S+      + +  +   
Sbjct: 640 SNDRTIRLWDA-ITGESLQTLEGHSDWVRSVAFSPDGTKIASGSN---DRIIRLWDAITG 695

Query: 337 DQKRISQDKEASYFDPVW 354
           +  +  ++         +
Sbjct: 696 ESLQTLKNHSGLEASSAF 713



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 8/97 (8%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            ++   +SN S   +  +    S     +SP G  IA          I +      +   
Sbjct: 601 YKISRTRSNWSAALQTLEGHSNSVSTVAFSPDGTKIASGSNDRT---IRLWDAITGESLQ 657

Query: 386 LVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +E  +    +  +SP G  +        D   +L+ 
Sbjct: 658 TLEGHSDWVRSVAFSPDGTKIA---SGSNDRIIRLWD 691



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 32/90 (35%), Gaps = 7/90 (7%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD ++I   S+      + +  +   +  +  +          +SP G  IA     
Sbjct: 628 AFSPDGTKIASGSN---DRTIRLWDAITGESLQTLEGHSDWVRSVAFSPDGTKIA---SG 681

Query: 368 GEKFAIGVMKK-DGSQERLLVEDSNLQAPT 396
                I +     G   + L   S L+A +
Sbjct: 682 SNDRIIRLWDAITGESLQTLKNHSGLEASS 711


>gi|225708434|gb|ACO10063.1| WD repeat protein 61 [Osmerus mordax]
          Length = 305

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/281 (17%), Positives = 97/281 (34%), Gaps = 40/281 (14%)

Query: 102 DWNSLGAQV-LVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ +V+  +   G       L    RLWD++  KQI  K   + P     +A 
Sbjct: 57  QWSLEGHQLGVVSVDISHNGAIAASSSLDAHIRLWDLESGKQI--KSMDAGPVDAWTVA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D                   S+ + +G     + +   +     Y   +R + +  
Sbjct: 114 -FSPD-------------------SKYIATGSHLGKVNIFGVESGKKEYSLDTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  + IY V   + A   L+      +S ++SPD +           + + V  ++  
Sbjct: 209 SDDGYIKIYDVQHANLAAT-LSGHASWVLSVAFSPDDTHF---VSSSSDKSVKVWDASSR 264

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                  D +   +   ++  G  I     +G+  AI V  
Sbjct: 265 ACVNTFFDHQDQVWSVKYNATGSKIV---SAGDDRAIHVYD 302



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 58/199 (29%), Gaps = 12/199 (6%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +++        +     S N    A ++ D      + L D    +  K +         
Sbjct: 56  LQWSLEGHQLGVVSVDISHNGAIAASSSLDA----HIRLWDLESGKQIKSMDAGPVDAWT 111

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESD 321
             FS + K    +      ++I+ V+        L T   FI +S +YSPD   +     
Sbjct: 112 VAFSPDSKYIA-TGSHLGKVNIFGVE-SGKKEYSLDTRGKFI-LSIAYSPDGKYLA---S 165

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 + +            +          +SP   L+  T        I  ++    
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV-TASDDGYIKIYDVQHANL 224

Query: 382 QERLLVEDSNLQAPTWSPS 400
              L    S + +  +SP 
Sbjct: 225 AATLSGHASWVLSVAFSPD 243



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +       Q +         +   +SP    IA     G K  I  ++    +  L 
Sbjct: 87  HIRLWDLESGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLG-KVNIFGVESGKKEYSLD 145

Query: 387 VEDSNLQAPTWSPSGRSLI 405
                + +  +SP G+ L 
Sbjct: 146 TRGKFILSIAYSPDGKYLA 164


>gi|225444830|ref|XP_002280723.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297738621|emb|CBI27866.3| unnamed protein product [Vitis vinifera]
          Length = 321

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 62/195 (31%), Gaps = 20/195 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S  + + + V D D         +    +++ +F P    +A A         + L DT 
Sbjct: 77  SASLDSFVRVFDVDTNATIATLEAPPSEVWQMQFDPKGSILAVA---GGSSASIKLWDTA 133

Query: 246 IDR-------------APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             +              P   G  +  +L+  +S +G+R       D  + I+ V+    
Sbjct: 134 TWKLIDTLAIPRPESSKPTDRGGNKKFVLSVAWSPDGRRLA-CGSMDGTISIFDVNRA-K 191

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L        S  YSP   +++F +  +G   +Y   + G           +     
Sbjct: 192 FLHHLEGHYMPVRSLVYSPVDPRVLFSASDDGHVHMY--DAEGKSLIGAMSGHASWVLSV 249

Query: 353 VWSPQGDLIAFTKFS 367
             SP G  IA     
Sbjct: 250 DVSPDGAAIATGSSD 264


>gi|119470442|ref|ZP_01613170.1| putative transcriptional regulator [Alteromonadales bacterium TW-7]
 gi|119446367|gb|EAW27643.1| putative transcriptional regulator [Alteromonadales bacterium TW-7]
          Length = 714

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 60/360 (16%), Positives = 115/360 (31%), Gaps = 74/360 (20%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E  L D+  +  IIG          R          Y  +  + G++     + +E   S
Sbjct: 264 EMVLVDL-SQFPIIGDAKLIKKCDLRYTG-------YAQL-DQNGEYVYYTEYKNEQDGS 314

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+ K  L +      +I    P     +  PR S +  K+AY          V+  D   
Sbjct: 315 GLYKFDLELQK---ESIVIPPPGVMYGVIMPRLSHSGNKIAYILSQKGQPFSVFSYDFNT 371

Query: 247 DRAPKRIGNFRSMILAPRF---SSNGKRALI------------------SVQKDEAMDIY 285
            R  KR+   +   ++  F   S++    +                   ++    A+  Y
Sbjct: 372 -RETKRLFKAKRRTISFAFDWLSNDQGVIVFEDSDLSSITFNENNIIKHTLNVTPAISPY 430

Query: 286 SVDLQSNA-------------TERLTNTLFIN--ISASYSPD-------------SSQIV 317
            + +QS                 + T+T   N      Y  D                 V
Sbjct: 431 YIAVQSANSLFYSANKTQAFSLIKATDTFGDNPVYEPLYKSDNDDYTIVEVINKAGPAHV 490

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV------WSPQGDLIAFTKFSGEKF 371
           F S+R G  QL++  +     K++S                  SP    I   K   ++F
Sbjct: 491 FVSERSGSSQLWI--AQNGLTKQLSFFNYDDDSSTYKLRGLKVSPNKRRILLIK--NKRF 546

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           ++  +         ++    +++  WS +  S+I+  + D     ++  ++L  R+  +I
Sbjct: 547 SLYDLNTQKFYPLEMLSGRKIESYIWSKNNESIIYIEQLDSKN--RVVELNLLTRDTRVI 604


>gi|304313236|ref|YP_003812834.1| hypothetical protein HDN1F_36240 [gamma proteobacterium HdN1]
 gi|301798969|emb|CBL47207.1| conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 997

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 13/128 (10%)

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +M+ NGS  KRI+Q     Y    WSP G  IA     G +  I ++  +G + R +   
Sbjct: 414 LMRWNGSRWKRITQCGR--YLSGYWSPNGGQIAAVSMHGGQARIELLHANGERIRTVYRA 471

Query: 390 SNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-------NETLINTPAYASD 439
           +  +A     W P G  L  +RK  G    +L S+DLN            L  +P + + 
Sbjct: 472 AVGEAVGGLAWHPEGHLLAVARKSVG-GVWRLASLDLNSGLWKDLPVRGRLPQSPRFDAS 530

Query: 440 PQWVGFMD 447
            + + ++D
Sbjct: 531 GEHLFYID 538



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 84/267 (31%), Gaps = 31/267 (11%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           +M  +G+  + +T           +SPN  ++A  +          L             
Sbjct: 414 LMRWNGSRWKRITQ--CGRYLSGYWSPNGGQIAAVSMHGGQARIELLHANGERIRTVYRA 471

Query: 255 NFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                +    +   G    ++         + S+DL S   + L     +  S  +    
Sbjct: 472 AVGEAVGGLAWHPEGHLLAVARKSVGGVWRLASLDLNSGLWKDLPVRGRLPQSPRFDASG 531

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQK----RISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             + +  D  G+  +  +     + +     ++   +    D   +  G+ +A  + S  
Sbjct: 532 EHLFYIDDTAGRLDVRRLTLATGEVESWSHSLTAVVDFDISDGAAAKSGE-LATLELSEN 590

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-----N 424
             A+ + K D      + ++ +++      + +++        D    + ++D+      
Sbjct: 591 GVALALQKLDTPAISTMQKEISIEH----KNNQAV-------SDVAPNIATVDVVPAWMT 639

Query: 425 GRNETLINTPAYASDP-----QWVGFM 446
           G  +  I    Y+  P      W+ F+
Sbjct: 640 GFEKQPIQD--YSPWPTLAPTAWMAFL 664


>gi|260795525|ref|XP_002592755.1| hypothetical protein BRAFLDRAFT_163746 [Branchiostoma floridae]
 gi|229277979|gb|EEN48766.1| hypothetical protein BRAFLDRAFT_163746 [Branchiostoma floridae]
          Length = 1308

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 64/175 (36%), Gaps = 7/175 (4%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            + ++ T  ++  +R++ M  R     + +      ++A  FS +G    + ++  +   
Sbjct: 349 SEPSFLTSGEDHTVRIWSMKDRSPVLRREV--HDGTVMAAAFSPDGSHIALGMKDGKIEI 406

Query: 284 IYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +Y  D+        ++TL   I    YSPD   +   S  +G+  ++    N    ++  
Sbjct: 407 LYKRDMSQKTVHVTSDTLGQAICDVKYSPDGRYLAAASH-DGRVSVFDPTQNYDSVRQF- 464

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                      WS     +      GE+ AI  M  +G       + S +   TW
Sbjct: 465 PAGSYPVMHIDWSTDSRFLQTNDEQGER-AIYKM-PEGKMATKRDDLSAIVWETW 517



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 59/185 (31%), Gaps = 6/185 (3%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           +      +    G    R L V  S  S       +++ +      +        D  + 
Sbjct: 325 APRTVHELVQGHGAGELRALTVHPSEPSFLTSGEDHTVRIWSMKDRSPVLRREVHDGTVM 384

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              FSP+   +A     D  I  +Y  D                I   ++S +G+    +
Sbjct: 385 AAAFSPDGSHIA-LGMKDGKIEILYKRDMSQKTVHVTSDTLGQAICDVKYSPDGRYLA-A 442

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D  + ++      ++  +     +  +   +S D S+ +  +D +G+  +Y M    
Sbjct: 443 ASHDGRVSVFDPTQNYDSVRQFPAGSYPVMHIDWSTD-SRFLQTNDEQGERAIYKMPEGK 501

Query: 336 SDQKR 340
              KR
Sbjct: 502 MATKR 506



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 49/168 (29%), Gaps = 35/168 (20%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQ----------------SNATERLTNTLFINISA 307
            FS   K  L+    +   ++  VD+                 +     LT         
Sbjct: 298 AFSPTAKTILVGTTTN---ELLEVDISEPEAPRTVHELVQGHGAGELRALTVHPS---EP 351

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+          S  +   +++ M+      +R  +  + +     +SP G  IA     
Sbjct: 352 SF--------LTSGEDHTVRIWSMKDRSPVLRR--EVHDGTVMAAAFSPDGSHIALGMKD 401

Query: 368 GEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGD 413
           G+   +           +  +     +    +SP GR L  +   DG 
Sbjct: 402 GKIEILYKRDMSQKTVHVTSDTLGQAICDVKYSPDGRYLA-AASHDGR 448


>gi|195394854|ref|XP_002056054.1| GJ10433 [Drosophila virilis]
 gi|194142763|gb|EDW59166.1| GJ10433 [Drosophila virilis]
          Length = 349

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 70/190 (36%), Gaps = 19/190 (10%)

Query: 239 VYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           V + D R D   K     +     +++   SS+G+    S   D +M ++  + ++   +
Sbjct: 82  VKVWDVREDNTLKLRHKLKGHALGVVSVAVSSDGQTIA-SSSLDSSMCLW--NARTGDKK 138

Query: 296 R-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPV 353
             LT       +  +SP +  ++     +GK  + +        +++   +   Y     
Sbjct: 139 HMLTFGPVDLWTVGFSPCNKYVI-SGLNDGK--ISMYSVETGKAEQVLDAQNGKYTLSIA 195

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKD 411
           +SP G  IA     G    I +      +    +E   +   +  +SP+ + L+      
Sbjct: 196 YSPDGKYIANGAIDG---IITIFDVAAGKVAQTLEGHAMPVRSLCFSPNSQMLLTGSD-- 250

Query: 412 GDTGSKLYSI 421
            D   KLY +
Sbjct: 251 -DGHMKLYDV 259



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 99/315 (31%), Gaps = 35/315 (11%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-------VIKEGKDRLRVEFRL-- 130
           +        + +   ++   F          +VTG              + L++  +L  
Sbjct: 42  DPEPASDDGEDVVEEENPFDFDKKEKKPTDFIVTGGLDDLVKVWDVREDNTLKLRHKLKG 101

Query: 131 -----WDVK---DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
                  V    D + I      SS   W        D  +    G    +       ++
Sbjct: 102 HALGVVSVAVSSDGQTIASSSLDSSMCLWNA---RTGDKKHMLTFGPVDLWTVGFSPCNK 158

Query: 183 SVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            V+SG+    + +     G   + L     +      +SP+ + +A    D      + +
Sbjct: 159 YVISGLNDGKISMYSVETGKAEQVLDAQNGKYTLSIAYSPDGKYIANGAIDG----IITI 214

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +  + +      + +  FS N  + L++   D  M +Y V   S+    L+   
Sbjct: 215 FDVAAGKVAQTLEGHAMPVRSLCFSPN-SQMLLTGSDDGHMKLYDV-AHSDVVGTLSGHA 272

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGD 359
              +  S+S D       S  +   +++    + +++K +    E +   +   +SP  D
Sbjct: 273 SWVLCVSFSEDGKHFA-SSSSDRSVKVW----DTAERKCLHTFNEHTDQVWGVRYSPSND 327

Query: 360 LIAFTKFSGEKFAIG 374
            +  +    +   I 
Sbjct: 328 KVI-SASEDKSLNIY 341


>gi|326775252|ref|ZP_08234517.1| serine/threonine protein kinase with WD40 repeats [Streptomyces cf.
           griseus XylebKG-1]
 gi|326655585|gb|EGE40431.1| serine/threonine protein kinase with WD40 repeats [Streptomyces cf.
           griseus XylebKG-1]
          Length = 723

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 69/200 (34%), Gaps = 18/200 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM----ILAPRFSSNGKRALI 274
           FSP+ + +A    D +  +R++ +  R  RA   +          + A  FS +G+    
Sbjct: 429 FSPDGKTIATGGKDGK--VRLWDVARRKVRATLTLRPAPGHTTVSVTAVAFSPDGRLLA- 485

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQ 332
           +        ++ V  +       T     N   S  +SPDS  +   +  +G   L+   
Sbjct: 486 AGTSSSFAALWDVGRRRQVATVTTGDYGANTLDSVEFSPDSRLLA-TASADGA-HLWNAV 543

Query: 333 SNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFT-----KFSGEKFAIGVMKKDGSQERL- 385
                 KRI+    E       +S  G  +A       +  G +  + +      + R  
Sbjct: 544 PGPDLGKRITVLGDEMRTQQVAFSRDGRTLATVGHLTDRNPGSQGVVRLWDVARHKLRKE 603

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
           L         ++SP G ++ 
Sbjct: 604 LYTAEEAYGLSYSPDGETIA 623



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 58/175 (33%), Gaps = 26/175 (14%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN------ISASYSPDSSQIV 317
           FS +GK    +  KD  + ++  D+        LT             + ++SPD   + 
Sbjct: 429 FSPDGKTIA-TGGKDGKVRLW--DVARRKVRATLTLRPAPGHTTVSVTAVAFSPDGRLLA 485

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-----WSPQGDLIAFTKFSGEKFA 372
                 G    +    +   +++++      Y         +SP   L+A     G    
Sbjct: 486 -----AGTSSSFAALWDVGRRRQVATVTTGDYGANTLDSVEFSPDSRLLATASADGAHLW 540

Query: 373 IGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFS-----RKKDGDTGSKLYSI 421
             V   D G +  +L ++   Q   +S  GR+L        R        +L+ +
Sbjct: 541 NAVPGPDLGKRITVLGDEMRTQQVAFSRDGRTLATVGHLTDRNPGSQGVVRLWDV 595



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 78/198 (39%), Gaps = 11/198 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----I 274
           FSP+ + +A A+ D   +           R        R+  +A  FS +G+       +
Sbjct: 522 FSPDSRLLATASADGAHLWNAVPGPDLGKRITVLGDEMRTQQVA--FSRDGRTLATVGHL 579

Query: 275 SVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           + +   +  +  + D+  +   +   T       SYSPD   I   + ++ K QL +  S
Sbjct: 580 TDRNPGSQGVVRLWDVARHKLRKELYTAEEAYGLSYSPDGETIA-TAAKDRKVQL-LDAS 637

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +G     + +          + P+  L+A   FSGE+  +  + +   + RL+  + N+Q
Sbjct: 638 DGRSTGTVDETTVVPVQSVQYGPRDSLLAV--FSGEEVKVWDVAEQKLKHRLVGNNWNVQ 695

Query: 394 APTWSPSGRSLIFSRKKD 411
              +SP G  +  +    
Sbjct: 696 HLAFSPDGTLVASASSDG 713


>gi|302835549|ref|XP_002949336.1| hypothetical protein VOLCADRAFT_104273 [Volvox carteri f.
           nagariensis]
 gi|300265638|gb|EFJ49829.1| hypothetical protein VOLCADRAFT_104273 [Volvox carteri f.
           nagariensis]
          Length = 348

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           ++        +    FSP+     +      D   V + D +            + + A 
Sbjct: 50  KHTLKGHADAVTSLCFSPDS----FLLASGSDDNTVRMWDVQSGNLRTIFTGHNAKVHAL 105

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            F  +G   L SV KD  +  + + L+      L            S DS +I+  S   
Sbjct: 106 NFIGSGT-ILFSVSKDRTIIEWDL-LRGILRMTLEGHAAPVYGVCVSKDSQKIITCSH-- 161

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E + V +    + ++  +   ++ +  V SP G LIA          + V +    + 
Sbjct: 162 -DETIRVWEIMKGNLQKTVKAHTSTVYSVVLSPDGKLIATASADKT---VKVWELATGEL 217

Query: 384 R--LLVEDSNLQAPTWSPSGRSLI 405
           +  L+   S++    ++P G+ L+
Sbjct: 218 KDTLIGHTSHVVGVAFTPDGKKLL 241



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 49/136 (36%), Gaps = 9/136 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N++    +    ++    SP+ + +A A+ D      V + +         +    S +
Sbjct: 173 GNLQKTVKAHTSTVYSVVLSPDGKLIATASADK----TVKVWELATGELKDTLIGHTSHV 228

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
           +   F+ +GK+ L S   DE +  +  D+++       T           +PD     F 
Sbjct: 229 VGVAFTPDGKKLL-SAGWDETIKCW--DVETGEVLHTFTGHQGKVHCVCTAPDGDTF-FS 284

Query: 320 SDREGKEQLYVMQSNG 335
              +   +L+ + +  
Sbjct: 285 GGEDKTIKLWRISTGS 300


>gi|111222637|ref|YP_713431.1| putative TolB-like translocation protein [Frankia alni ACN14a]
 gi|111150169|emb|CAJ61864.1| Putative TolB-like translocation protein; putative signal peptide
           [Frankia alni ACN14a]
          Length = 356

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 17/178 (9%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            F++R   +               + RDG        S D   +   F+ +     YAT 
Sbjct: 181 AFSTRTSILDTRTWRLDDTLEDYRIVRDG----RTYRSPDANYWGVTFADD--THFYATL 234

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEAMDIYS 286
                        R D A + +   R+ +  P  S +G R        S+  D    +  
Sbjct: 235 ATGG----QTYLVRGDVAARTVTTLRANVECPSLSPDGTRLAFKKRVASLPVDAPWRLTV 290

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQ 343
           +DL++     L     ++  A +  D+  + +    +    L+ + ++G    +R++ 
Sbjct: 291 LDLRTMRETALAEQRNVDDQALWL-DARTLAYALPGDYGSDLWAVPADGGGSPRRLTT 347



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 72/222 (32%), Gaps = 34/222 (15%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD------LQSNATE-- 295
              D   +R      +    R S +G+ A  +V         +        L +      
Sbjct: 138 LGADLRERRDYPLGGIPTRARVSPSGRMAAWTVFVSGDSYAGTAFSTRTSILDTRTWRLD 197

Query: 296 -RLTNTLFINISASY-SPDSSQ--IVFESDREGKEQLYVMQSNGSD--------QKRISQ 343
             L +   +    +Y SPD++   + F  D       Y   + G            R   
Sbjct: 198 DTLEDYRIVRDGRTYRSPDANYWGVTFADD----THFYATLATGGQTYLVRGDVAARTVT 253

Query: 344 DKEASYFDPVWSPQGDLIAFTKF-----SGEKFAIGVMKKDGSQERLLVEDSNLQAPT-W 397
              A+   P  SP G  +AF K          + + V+     +E  L E  N+     W
Sbjct: 254 TLRANVECPSLSPDGTRLAFKKRVASLPVDAPWRLTVLDLRTMRETALAEQRNVDDQALW 313

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYAS 438
               R+L ++    GD GS L+++  +G      + T A A 
Sbjct: 314 L-DARTLAYAL--PGDYGSDLWAVPADGGGSPRRLTTAALAP 352



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 26/161 (16%)

Query: 302 FINISASYSPDSSQIVFESDREGKE---------------QLYVMQSNGSDQK-----RI 341
            I   A  SP      +     G                 + + +     D +     R 
Sbjct: 152 GIPTRARVSPSGRMAAWTVFVSGDSYAGTAFSTRTSILDTRTWRLDDTLEDYRIVRDGRT 211

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
            +  +A+Y+   ++      A     G+ +   +++ D +   +    +N++ P+ SP G
Sbjct: 212 YRSPDANYWGVTFADDTHFYATLATGGQTY---LVRGDVAARTVTTLRANVECPSLSPDG 268

Query: 402 RSLIFSRKKDG---DTGSKLYSIDLNGRNETLINTPAYASD 439
             L F ++      D   +L  +DL    ET +       D
Sbjct: 269 TRLAFKKRVASLPVDAPWRLTVLDLRTMRETALAEQRNVDD 309


>gi|291237554|ref|XP_002738698.1| PREDICTED: TBP-associated factor 5-like [Saccoglossus kowalevskii]
          Length = 555

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/234 (18%), Positives = 89/234 (38%), Gaps = 23/234 (9%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD   A    +       ++   FSP++  +  A+ D    +R++ +   ++    R 
Sbjct: 284 RIMDERTATDNRVLLGHSGPVYATSFSPDRTMLLSASEDC--TVRLWSLQMFVNLVCYRG 341

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPD 312
            N+   +   +FS  G    +SV  D    +++   +++   R+ +    ++    + P+
Sbjct: 342 HNYP--VWDVQFSPYG-YYFVSVGHDRTARLWA--TENHQPLRVFSGHLSDVDCVKFHPN 396

Query: 313 SSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
           S+ I    SDR       +   +  +  RI    +A      +SP G  +A         
Sbjct: 397 SNYIATGSSDRT----CRLWDVSSGNCVRILTGHKAPIHSIAFSPDGKHLATAGVDKTVL 452

Query: 371 -FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSID 422
            + IG     G   RL+     + +  +S  G +L       G D   KL+ ++
Sbjct: 453 LWDIGHGSLIG---RLVGHTDTIYSLCFSRDGSTLA----SGGIDNCVKLWDVN 499



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 43/125 (34%), Gaps = 7/125 (5%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    +  + D    N   +       +    FSP+ + +A A  D      V 
Sbjct: 397 SNYIATGSSDRTCRLWDVSSGNCVRILTGHKAPIHSIAFSPDGKHLATAGVDK----TVL 452

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLT 298
           L D        R+      I +  FS +G     S   D  + ++ V+        + +T
Sbjct: 453 LWDIGHGSLIGRLVGHTDTIYSLCFSRDGSTLA-SGGIDNCVKLWDVNKVFGEVDTDEIT 511

Query: 299 NTLFI 303
           NT  I
Sbjct: 512 NTTHI 516


>gi|149197121|ref|ZP_01874173.1| hypothetical protein LNTAR_11966 [Lentisphaera araneosa HTCC2155]
 gi|149139667|gb|EDM28068.1| hypothetical protein LNTAR_11966 [Lentisphaera araneosa HTCC2155]
          Length = 973

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 56/143 (39%), Gaps = 21/143 (14%)

Query: 304 NISASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           ++  S+  D  ++ F    SDR     +Y         K+++     + ++PV+ P GD 
Sbjct: 192 DVDLSF--DHKKLAFAWKKSDRLDDYHIYEYDLAEGKTKQLTFGLGRADYEPVYLPDGD- 248

Query: 361 IAFTKFSGEK---------FAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKK 410
           + F     E+           +  M  +G   R L  +  +   P    +GR L ++R  
Sbjct: 249 LVFVSTRPEQSVPCWKSEISNLYRMDGEGRYVRRLAIDQVHTIYPQLLTNGR-LSYTRWD 307

Query: 411 DGDTG----SKLYSIDLNGRNET 429
             D        +++++ +G+ + 
Sbjct: 308 YSDRAQLFPHPVFTMNPDGQAQR 330



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 66/201 (32%), Gaps = 33/201 (16%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYAT--YDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           + L      ++ +   S + +K+A+A    D  D   +Y  D    +  +          
Sbjct: 180 QVLLDDPHGMMRDVDLSFDHKKLAFAWKKSDRLDDYHIYEYDLAEGKTKQLTFGLGRADY 239

Query: 262 APRFSSNGKRALISVQ--------KDEAMDIYSVDLQSNATERLTNTLFINISASYSP-- 311
            P +  +G    +S +        K E  ++Y +D +     RL     I+   +  P  
Sbjct: 240 EPVYLPDGDLVFVSTRPEQSVPCWKSEISNLYRMDGEGRYVRRL----AIDQVHTIYPQL 295

Query: 312 --DSSQIVFESDREGKEQL-----YVMQSNGSDQKRISQDKEASYFDPVW--------SP 356
             +        D   + QL     + M  +G  Q+  +     S+F            S 
Sbjct: 296 LTNGRLSYTRWDYSDRAQLFPHPVFTMNPDGQAQR--AFYGGNSWFPTSLLHVRPIPGSH 353

Query: 357 QGDLIAFTKFSGEKFAIGVMK 377
           +   IA    +G+   + ++ 
Sbjct: 354 KTMAIAAGHHTGQNGKLAIID 374



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 31/109 (28%), Gaps = 13/109 (11%)

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFT---KFSGEKFAIGVMKKDGSQERLLV--EDS 390
              + +  D      D   S     +AF        + + I        + + L      
Sbjct: 177 GSSQVLLDDPHGMMRDVDLSFDHKKLAFAWKKSDRLDDYHIYEYDLAEGKTKQLTFGLGR 236

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTG-------SKLYSIDLNGRNETLIN 432
               P + P G  L+F   +   +        S LY +D  GR    + 
Sbjct: 237 ADYEPVYLPDGD-LVFVSTRPEQSVPCWKSEISNLYRMDGEGRYVRRLA 284


>gi|74136113|ref|NP_001027919.1| WD repeat and SOCS box-containing protein 1 [Takifugu rubripes]
 gi|20532297|sp|Q9W5Z5|WSB1_FUGRU RecName: Full=WD repeat and SOCS box-containing protein 1;
           Short=WSB-1
 gi|4887240|gb|AAD32247.1| WSB1 protein [Takifugu rubripes]
 gi|5081826|gb|AAD39552.1| WSB1 protein [Takifugu rubripes]
          Length = 427

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 65/185 (35%), Gaps = 25/185 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D         + +   ++    F+ +G   L+S   D+ + ++ +    N  + L
Sbjct: 156 RIKIWDVYTGTLLLNLMDHTDIVRDLTFAPDGSLMLVSASTDKKLRVWDLKDDGNMVKVL 215

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S+++SPDSS  V  S     + + +   +     R  +          +SP 
Sbjct: 216 WGHPNRVYSSAFSPDSS--VLCS-VGASKAVLLWNMDKYTLIRKLEGHHNDVVSCEFSPD 272

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----------------TWSPS 400
           G L+A   +        V+  D  +  +L+E  +L  P                 ++   
Sbjct: 273 GALLATASYDTR-----VIVWDHQRGSILLELGHLFPPPSPIFAGGANDRWVRSVSFCAD 327

Query: 401 GRSLI 405
           GR + 
Sbjct: 328 GRHIA 332



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 67/209 (32%), Gaps = 42/209 (20%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WDV     ++             + HT   DI + +T      +  ++ VS S   
Sbjct: 156 RIKIWDVYTGTLLLNL-----------MDHT---DIVRDLTFAP---DGSLMLVSASTDK 198

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              K  +  +  DG N+  +       ++   FSP+   +            V L +   
Sbjct: 199 ---KLRVWDLKDDG-NMVKVLWGHPNRVYSSAFSPDSSVLCSV----GASKAVLLWNMDK 250

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----------TE 295
               +++    + +++  FS +G     +   D  + ++  D Q  +             
Sbjct: 251 YTLIRKLEGHHNDVVSCEFSPDGALLA-TASYDTRVIVW--DHQRGSILLELGHLFPPPS 307

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESD 321
            +      +    S S+  D   I   SD
Sbjct: 308 PIFAGGANDRWVRSVSFCADGRHIASVSD 336



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 56/139 (40%), Gaps = 5/139 (3%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            L +   +  + I+  D+ +      L +   I    +++PD S ++  +  + K +++ 
Sbjct: 147 LLATGLNNGRIKIW--DVYTGTLLLNLMDHTDIVRDLTFAPDGSLMLVSASTDKKLRVWD 204

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++ +G+  K +        +   +SP   ++     S +   +  M K     +L    +
Sbjct: 205 LKDDGNMVKVL-WGHPNRVYSSAFSPDSSVLCSVGAS-KAVLLWNMDKYTLIRKLEGHHN 262

Query: 391 NLQAPTWSPSGRSLIFSRK 409
           ++ +  +SP G  L  +  
Sbjct: 263 DVVSCEFSPDGALLATASY 281


>gi|327278948|ref|XP_003224221.1| PREDICTED: WD repeat-containing protein 1-like [Anolis
           carolinensis]
          Length = 608

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 69/215 (32%), Gaps = 36/215 (16%)

Query: 108 AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
           A  +V  +    G          + R+WD   ++ ++  ++       + IA T      
Sbjct: 58  AHQVVVAKYAPSGFYIASGDASGKLRIWDTTQQEHLLKYEYQPFAGKIKDIAWTEDSKRI 117

Query: 164 QSITGEKGDFNSRILFVSESVV---------------SGIIKNSLCVMDRD--------- 199
            ++   +  F +  L+ + S V                      L     D         
Sbjct: 118 AAVGEGREIFGTVFLWDTGSSVGEIIGHNKVINSVDIKQTRPYRLATGSDDNSSAFSEGP 177

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---F 256
               ++   +  + +   RFSP+  ++A A  D     ++++ D +       +G     
Sbjct: 178 PFKFKFTMRNHSRFVNCVRFSPDGNRLATAGADG----QIFIYDGKTGEKVTALGGNKAH 233

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              I A  +S +G R L S   D    I+ V   S
Sbjct: 234 EGGIYAISWSPDGNRLL-SASGDRTAKIWDVGANS 267



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 76/257 (29%), Gaps = 55/257 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + + D   I  +       +   +++P+   +A  + D    LR++    +       
Sbjct: 40  VIIRNIDNPAIADIYTEHAHQVVVAKYAPSGFYIA--SGDASGKLRIWDTTQQEHLLKYE 97

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK--------------------DEAMDIYSVDLQSN 292
              F   I    ++ + KR     +                          I SVD++  
Sbjct: 98  YQPFAGKIKDIAWTEDSKRIAAVGEGREIFGTVFLWDTGSSVGEIIGHNKVINSVDIKQT 157

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RL      N S           F    EG    +             ++        
Sbjct: 158 RPYRLATGSDDNSS----------AFS---EGPPFKFKFTM---------RNHSRFVNCV 195

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFS 407
            +SP G+ +A    +G    I +      ++          +  + A +WSP G  L+  
Sbjct: 196 RFSPDGNRLA---TAGADGQIFIYDGKTGEKVTALGGNKAHEGGIYAISWSPDGNRLL-- 250

Query: 408 RKKDGDTGSKLYSIDLN 424
               GD  +K++ +  N
Sbjct: 251 -SASGDRTAKIWDVGAN 266



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 9/120 (7%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES 320
           A      G  A +    D  + +Y++   +    E++          +YS D     F +
Sbjct: 450 AVAIHPGGGMAAVGGS-DGNVYLYAIQGATLKREEKILEVKGPVTDLAYSHDG---AFLA 505

Query: 321 DREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             +  + + V   ++G  +  +     A      WSP  +  A     G    + V   D
Sbjct: 506 VTDASKAVMVFSVADGYAEHNVYYGHHAKIVCLAWSPDNEHFA---SGGMDMMVFVWTLD 562


>gi|150006563|ref|YP_001301307.1| putative alanyl dipeptidyl peptidase [Bacteroides vulgatus ATCC
           8482]
 gi|294775478|ref|ZP_06740991.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           vulgatus PC510]
 gi|149934987|gb|ABR41685.1| putative alanyl dipeptidyl peptidase [Bacteroides vulgatus ATCC
           8482]
 gi|294450719|gb|EFG19206.1| peptidase, S9A/B/C familie, catalytic domain protein [Bacteroides
           vulgatus PC510]
          Length = 816

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 78/263 (29%), Gaps = 59/263 (22%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-----FSSNGKRALI 274
           SP+ + +           R   +  R   + +        +LA R     +     R   
Sbjct: 187 SPDGRYLI-------ANYRTTYVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYY 239

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---------- 324
           +    +   +  VD  +     L N    +    ++P    ++F   +EG          
Sbjct: 240 TRTGVDGRQLIVVDPLTGMETVLVN-KLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEV 298

Query: 325 ------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-------TK 365
                       +  L          + ++     + +    S  G  +         TK
Sbjct: 299 LEPDDRQPGWRNRSYLAKYDLKTGLLQPLTF-GYHNVWAADISNDGRYLLMMTSQSRLTK 357

Query: 366 FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK-----------KDGD 413
                F++  +     Q  LL++ D  +    +SP G  ++ S             K+G 
Sbjct: 358 RPTTLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVSGSPESLGGIGKNVKEGQ 417

Query: 414 TGS----KLYSIDLNGRNETLIN 432
           T S    +LY +++  +  T + 
Sbjct: 418 TPSMTDGQLYLLNIADKRVTPLT 440



 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 77/199 (38%), Gaps = 28/199 (14%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFI 303
           + +      + A   S++G+  L+   +            +Y +D+Q+   E L +    
Sbjct: 325 QPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPTTLFSLYRLDMQTLQAELLIDKDGF 384

Query: 304 NISASYSPDSSQIVFESDRE-----GKE------------QLYVMQSNGSDQKRISQDKE 346
              A +SPD +Q++     E     GK             QLY++         +++D  
Sbjct: 385 ISGARFSPDGTQVLVSGSPESLGGIGKNVKEGQTPSMTDGQLYLLNIADKRVTPLTKDFN 444

Query: 347 ASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSL 404
            S    VW+   G  I FT  + + +++  M     + + L V +  + + + + +   +
Sbjct: 445 PSVQRAVWNKADGQ-IYFTAENRDCYSLYRMNPADGKIQQLEVSEDLVNSFSLAQNAPVM 503

Query: 405 IFSRKKDGDTGSKLYSIDL 423
           ++   +      +LY+++ 
Sbjct: 504 VY-YGQSASNSDRLYTMNT 521


>gi|91773096|ref|YP_565788.1| YVTN beta-propeller repeat-containing protein [Methanococcoides
           burtonii DSM 6242]
 gi|91712111|gb|ABE52038.1| NHL repeat domain protein [Methanococcoides burtonii DSM 6242]
          Length = 415

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 71/225 (31%), Gaps = 21/225 (9%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            AY        + V    T       +I  +   +     + +G+R  ++    +   + 
Sbjct: 38  FAYV-MSSGGNVSVIDTATDSIVTTMKIEAYSGEV---AVTPDGRRIYVTDSAIDRTTVP 93

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            +D  +N      N    +  A+ +P  ++ V+ S R+    L +  +  S    I+   
Sbjct: 94  IIDTVTNTVHSTVNVGGSSWGAAINPAGTR-VYVSIRDSTNILVINTATNS----ITSKV 148

Query: 346 EASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGR 402
           +  +       +P G  +  T    +   I V+    +     V    +      +P G 
Sbjct: 149 DVGWGPDRIAITPDGTKLYVTSHKND--IISVIDTVTNSVISTVNVGEIPWDVAVTPDGT 206

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
            +  +  +    G+ +  ID    N T            W   ++
Sbjct: 207 KVYVTNSR----GNNVSVIDTFTNNVTATVNVGEYP---WGVIVN 244


>gi|330798073|ref|XP_003287080.1| hypothetical protein DICPUDRAFT_151152 [Dictyostelium purpureum]
 gi|325082916|gb|EGC36383.1| hypothetical protein DICPUDRAFT_151152 [Dictyostelium purpureum]
          Length = 2401

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 55/170 (32%), Gaps = 26/170 (15%)

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            D   + I    +   A  +S +G     S  KD  + IY     S     + ++ +I+  
Sbjct: 1495 DNCKQTITGLENGATAVAYSRDGSLIA-SAGKDSIIHIYKASNGSEVLTLVGHSNWISCF 1553

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP---------- 356
             S+S D+  +   S     E + +      +Q    +D + +     +SP          
Sbjct: 1554 -SFSDDNKTLASSS---WDETVIIWDLVVGNQIHQFKDHKRAVNYLEFSPTNNNLLMSCA 1609

Query: 357  -QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                +I F  +    F I                  + + +WSP G  + 
Sbjct: 1610 WDSSIIIFNTYDKNIFRIFRS----------AHSKPVNSCSWSPDGSMIA 1649



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 76/221 (34%), Gaps = 24/221 (10%)

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
            N +      +       +S +   +A           +++           +    + I 
Sbjct: 1496 NCKQTITGLENGATAVAYSRDGSLIA----SAGKDSIIHIYKASNGSEVLTLVGHSNWIS 1551

Query: 262  APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI----V 317
               FS + K    S   DE + I+ + +  N   +  +         +SP ++ +     
Sbjct: 1552 CFSFSDDNKTLA-SSSWDETVIIWDL-VVGNQIHQFKDHKRAVNYLEFSPTNNNLLMSCA 1609

Query: 318  FESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            ++S       + +  +   +  RI +   +       WSP G +IA + + G    I   
Sbjct: 1610 WDSS------IIIFNTYDKNIFRIFRSAHSKPVNSCSWSPDGSMIASSAWDGTV-KIWNP 1662

Query: 377  KKDGSQERLL--VED----SNLQAPTWSPSGRSLIFSRKKD 411
                ++ RLL  ++      ++++  +S + + +  +  K+
Sbjct: 1663 HDTIAKNRLLHVIDQSLVYGSIKSCKFSSNSKQIYATTMKN 1703



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 14/126 (11%)

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKF 366
            ++SP +  ++     +   +++     G+    +S +   +      +SP G  IA    
Sbjct: 1861 AFSPKNEHLLISCSDDYSTKVW---LRGNPVVTLSTEGSTNTIKHCTFSPDGKYIATVSR 1917

Query: 367  SGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  IG+   +  +   RL      +   T+SP  + L+      G     +   ++ 
Sbjct: 1918 DCT---IGLYLAESYKLLNRLRGHTDWINFCTFSPDSKKLV-----SGGWDFNIRVWNVR 1969

Query: 425  GRNETL 430
             + ETL
Sbjct: 1970 TQKETL 1975


>gi|302832590|ref|XP_002947859.1| hypothetical protein VOLCADRAFT_73435 [Volvox carteri f.
           nagariensis]
 gi|300266661|gb|EFJ50847.1| hypothetical protein VOLCADRAFT_73435 [Volvox carteri f.
           nagariensis]
          Length = 448

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 66/192 (34%), Gaps = 11/192 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S N     Y          + +          +I    + + A R+S +G   L+  + 
Sbjct: 56  WSANS---IYVLCGIFSRGTIQVWSVESSEWSCKIDEGPAGVAAVRWSPDGCSVLVVAEF 112

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++S  L       L     ++   ++S D + +      + K+   V  +    +
Sbjct: 113 ALRVTVWS--LTDRKCRYLRGPKHVDRGVAFSADGAHMAVLERSDMKDWASVYDTRTWSE 170

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---- 394
               Q   +   D  WSP+G ++A    S  K+ + ++              + +A    
Sbjct: 171 AAHFQLSTSDAADLAWSPEGCVLA-VWDSCLKYKVVLVNPRNGSPLATYSAYDHEALGVK 229

Query: 395 -PTWSPSGRSLI 405
             +WSP+G  L 
Sbjct: 230 LCSWSPAGELLA 241



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/240 (18%), Positives = 81/240 (33%), Gaps = 29/240 (12%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           +F +S A +R I       I +  T       S +  V     S      LC +   G  
Sbjct: 21  RFVASVAEYRLI-------IREVETMRVVQLYSCLDRVDSIEWSANSIYVLCGIFSRGTI 73

Query: 203 IRYLTPSRDQ---ILFEP------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             +   S +    I   P      R+SP+   V       E  LRV +     DR  + +
Sbjct: 74  QVWSVESSEWSCKIDEGPAGVAAVRWSPDGCSVLVVA---EFALRVTVWSL-TDRKCRYL 129

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS---NATERLTNTLFINISASYS 310
              + +     FS++G    +  + D        D ++    A  +L+ +   ++  ++S
Sbjct: 130 RGPKHVDRGVAFSADGAHMAVLERSDMKDWASVYDTRTWSEAAHFQLSTSDAADL--AWS 187

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD---PVWSPQGDLIAFTKFS 367
           P+   +    D   K ++ ++              +          WSP G+L+A   F 
Sbjct: 188 PEGCVLA-VWDSCLKYKVVLVNPRNGSPLATYSAYDHEALGVKLCSWSPAGELLAVGSFD 246



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 58/183 (31%), Gaps = 9/183 (4%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P FS +G+      +      +   ++++    +L + L    S  +S +S  ++     
Sbjct: 14  PAFSPDGRFVASVAE----YRLIIREVETMRVVQLYSCLDRVDSIEWSANSIYVLCGIFS 69

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G   + V     S+      +  A      WSP G  +     +     + V      +
Sbjct: 70  RGT--IQVWSVESSEWSCKIDEGPAGVAAVRWSPDGCSVLVV--AEFALRVTVWSLTDRK 125

Query: 383 ERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            R L    +  +   +S  G  +    + D    + +Y             + + A+D  
Sbjct: 126 CRYLRGPKHVDRGVAFSADGAHMAVLERSDMKDWASVYDTRTWSEAAHFQLSTSDAADLA 185

Query: 442 WVG 444
           W  
Sbjct: 186 WSP 188


>gi|242811615|ref|XP_002485786.1| acylamino-acid-releasing enzyme, putative [Talaromyces stipitatus
           ATCC 10500]
 gi|218714125|gb|EED13548.1| acylamino-acid-releasing enzyme, putative [Talaromyces stipitatus
           ATCC 10500]
          Length = 620

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 77/201 (38%), Gaps = 33/201 (16%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKE-QLYV 330
           + +  D    +YS   +  +TE +++    N  +  S  S  I F SDR   G    LY+
Sbjct: 17  VRLSPDAMSVVYSAKPKWKSTEEVSSIWVGNTQSHKSTHSEYIAFLSDRGNLGNSCALYL 76

Query: 331 MQSNG-SDQKRISQDKEA-SYFDPVWSPQGDLIAF-------------TKFSGEKF-AIG 374
            + +G  + K ++      S     +SP G  IAF                 G  +  + 
Sbjct: 77  CRLDGQRETKALTPPTNKKSISKFEFSPDGKHIAFLAAAEKEQNEVVDVWNQGWDYANLH 136

Query: 375 VMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGS-----------KLYSID 422
           ++  +    R+L  ED ++   +WS  G  + +   +  D  S           ++ +I 
Sbjct: 137 LIDIESGSTRVLAPEDVHVVDFSWSEDGSQMAYVTHRSPDIESGWLHGATISTVEIAAIG 196

Query: 423 LNGRNETLINTPAYASDPQWV 443
           +  R  TL + P   SD  W+
Sbjct: 197 VGAR--TLCHVPREVSDLTWI 215



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 14/73 (19%)

Query: 265 FSSNGKRALI--------------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           FS +GK                    Q  +  +++ +D++S +T  L       +  S+S
Sbjct: 102 FSPDGKHIAFLAAAEKEQNEVVDVWNQGWDYANLHLIDIESGSTRVLAPEDVHVVDFSWS 161

Query: 311 PDSSQIVFESDRE 323
            D SQ+ + + R 
Sbjct: 162 EDGSQMAYVTHRS 174



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 44/132 (33%), Gaps = 17/132 (12%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQ 224
              K   +  I F+S+    G    +L +   DG         P+  + + +  FSP+ +
Sbjct: 49  QSHKSTHSEYIAFLSDRGNLGN-SCALYLCRLDGQRETKALTPPTNKKSISKFEFSPDGK 107

Query: 225 KVAY-------------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            +A+                   D   ++L+D       + +      ++   +S +G +
Sbjct: 108 HIAFLAAAEKEQNEVVDVWNQGWDYANLHLIDIESGS-TRVLAPEDVHVVDFSWSEDGSQ 166

Query: 272 ALISVQKDEAMD 283
                 +   ++
Sbjct: 167 MAYVTHRSPDIE 178


>gi|47221500|emb|CAG08162.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 418

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 62/186 (33%), Gaps = 21/186 (11%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           + + +     A   +     ++    F  NG   L+S  +D+ + I+ +  +    + L+
Sbjct: 120 IKIWNVLTGEAVFDLHGHEGVVRDLVFPQNGTLTLVSSSRDKTLRIWDLAHKGRRAQVLS 179

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLY-------VMQSNGSDQKRISQDKEASYFD 351
                    S SPD S I      +    L+       +    G      ++        
Sbjct: 180 GHKDWISCCSVSPDCSMIASVGRFDRMVCLWSLRSYTLIRNLTGG-----TRKTLYLLSS 234

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--------EDSNLQAPTWSPSGRS 403
             +SP G L+A   FSG  + I +     + E+L            + + +  +SP G  
Sbjct: 235 CDFSPDGALLATAAFSGSSWWIDLWDP-YTAEKLATLVDYFDDYGQNQISSVQFSPDGLY 293

Query: 404 LIFSRK 409
           L     
Sbjct: 294 LAIVTD 299



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 68/234 (29%), Gaps = 39/234 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---PRF---------- 265
           FSP     A++      I+ V         + K   +      +   P +          
Sbjct: 34  FSPKGDWFAWSMGH--GIVWVVAWPLDSADSQKADTDLGDKSFSCGHPVWGLAFGPRPPK 91

Query: 266 -----SSNGK-------RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                S + +         L +  ++  + I++V L   A   L     +     +  + 
Sbjct: 92  CAAGASPSRRPPKGSNSLLLATGLENGVIKIWNV-LTGEAVFDLHGHEGVVRDLVFPQNG 150

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +  +  S R+   +++ +   G   + +S  K+        SP   +IA          +
Sbjct: 151 TLTLVSSSRDKTLRIWDLAHKGRRAQVLSGHKDW-ISCCSVSPDCSMIASVGRFDRMVCL 209

Query: 374 G-------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                   +    G   + L     L +  +SP G  L  +          L+ 
Sbjct: 210 WSLRSYTLIRNLTGGTRKTL---YLLSSCDFSPDGALLATAAFSGSSWWIDLWD 260


>gi|50546811|ref|XP_500875.1| YALI0B14245p [Yarrowia lipolytica]
 gi|49646741|emb|CAG83126.1| YALI0B14245p [Yarrowia lipolytica]
          Length = 741

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/244 (20%), Positives = 90/244 (36%), Gaps = 24/244 (9%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T   G F+    FV    ++G    S  V+  D A            ++   FSP+Q+ +
Sbjct: 430 TLIAGGFSDS--FVKVWSLNGSRLKS--VVKGDTATTSKRLVGHAGPVYGVSFSPDQRYL 485

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             A+ D    + ++ MDT       +  N    +    FS +G     +   D+   ++S
Sbjct: 486 LSASAD--KTVMLWSMDTYTGLVCYKGHNEP--VWDVAFSPHGHYFA-TASHDQTARLWS 540

Query: 287 VDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            D       R+      ++    + P+ +  VF    +   +++          R+    
Sbjct: 541 CDHIY--PLRIFAGHMSDVDCVIFHPNGTY-VFTGSSDRTVRMW--DVAKGSSVRVFIGH 595

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            A+      SP G  +A    +GE   I + +  GS  RL +   + +A  +S     L 
Sbjct: 596 TAAINCLAVSPDGRWLA---SAGEDHVIILWEI-GSGRRLKIMRGHGKASIYS-----LA 646

Query: 406 FSRK 409
           FSR+
Sbjct: 647 FSRE 650


>gi|108757152|ref|YP_634173.1| S9B family peptidase [Myxococcus xanthus DK 1622]
 gi|108461032|gb|ABF86217.1| peptidase, S9B (dipeptidyl peptidase IV) subfamily [Myxococcus
           xanthus DK 1622]
          Length = 734

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 80/260 (30%), Gaps = 68/260 (26%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +  ++           R+Y++D    +  +         L PRFS +GK+     + D
Sbjct: 128 SEDGNRLLVPLSG-----RLYVVDRASGKVTELKTGPG--TLDPRFSPDGKQVSYVREHD 180

Query: 280 EAMDIYSVDLQSNATERLTNT-----------------LFINISASYSPDSSQIVFES-- 320
               +Y +D+ +N  +R+T                   +       +SPD+  I +    
Sbjct: 181 ----VYRIDVAANREQRVTKGGTEAKSHGVAEFVAQEEMGRFTGYWWSPDAKSIAYTEAD 236

Query: 321 ---------------DREGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVWS-------- 355
                          +R G++  Y      + + R  I+           W         
Sbjct: 237 TTEVEKLTIVDVMHPERGGEDFAYPRPGKANAKVRLGITPVTGGKTVWAQWDAAKYPYLA 296

Query: 356 ----PQG---DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGR 402
               P+G     +   +   E+  + V  + G    LL E            P W   G 
Sbjct: 297 TVTWPKGGPLTALVQNREQTEQKLLAVDPRTGKSRELLTEQDAAWLNLEQVFPLWLEDGS 356

Query: 403 SLIFSRKKDGDTGSKLYSID 422
             ++  +++G    +L   D
Sbjct: 357 GFLWYTERNGGPEVELRKAD 376



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 57/182 (31%), Gaps = 36/182 (19%)

Query: 258 SMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFI--NISASYSPDS 313
                 R S + K  L    +  +    +Y+ D++S  T+ L     I      + +P+ 
Sbjct: 49  GRPGGVRISPDEKSILFLRTQPTSNVQTLYAFDVESGQTQELLTPEAILKGAEETLTPEE 108

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                                  ++ R+S     SY     S  G+ +           +
Sbjct: 109 KAR-------------------RERMRVSARGFTSY---QVSEDGNRLLV----PLSGRL 142

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            V+ +   +   L        P +SP G+ + + R+ D      +Y ID+    E  +  
Sbjct: 143 YVVDRASGKVTELKTGPGTLDPRFSPDGKQVSYVREHD------VYRIDVAANREQRVTK 196

Query: 434 PA 435
             
Sbjct: 197 GG 198



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 52/319 (16%), Positives = 104/319 (32%), Gaps = 67/319 (21%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F S  +    + +   +   L V+DR  A+ +           +PRFSP+ ++V+Y    
Sbjct: 122 FTSYQVSEDGNRLLVPLSGRLYVVDR--ASGKVTELKTGPGTLDPRFSPDGKQVSYV--R 177

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-------------FSSNGKRALISV--- 276
           + D+ R+ +   R  R  K     +S  +A               +S + K    +    
Sbjct: 178 EHDVYRIDVAANREQRVTKGGTEAKSHGVAEFVAQEEMGRFTGYWWSPDAKSIAYTEADT 237

Query: 277 --------------QKDEAMDIYSVDLQSNATERLTNTLFINISASY------------- 309
                         ++      Y    ++NA  RL  T        +             
Sbjct: 238 TEVEKLTIVDVMHPERGGEDFAYPRPGKANAKVRLGITPVTGGKTVWAQWDAAKYPYLAT 297

Query: 310 --SPDSSQI-VFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFD-----PVWSPQGDL 360
              P    +     +RE  EQ L  +       + +  +++A++ +     P+W   G  
Sbjct: 298 VTWPKGGPLTALVQNREQTEQKLLAVDPRTGKSRELLTEQDAAWLNLEQVFPLWLEDGSG 357

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSL-----IFSRKKDGDT 414
             +         + + K DG+  R LV+ D+  ++       R +     ++       T
Sbjct: 358 FLWYTERNGGPEVELRKADGALVRTLVKPDAGFRSLA-----RYIQKDDTLYFNGGPNPT 412

Query: 415 GSKLYSIDLNGRNETLINT 433
            S L+ +   G  E +   
Sbjct: 413 QSHLWRVKAGGAPEKVTTG 431


>gi|107103133|ref|ZP_01367051.1| hypothetical protein PaerPA_01004202 [Pseudomonas aeruginosa PACS2]
          Length = 335

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 78/278 (28%), Gaps = 15/278 (5%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH                     L     +  G   ++L + D    + R L      I 
Sbjct: 25  AHAACSANLALQPASSLPALGGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIE 84

Query: 215 --FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKR 271
                 FSP+ + + +          V+       +AP  +          P+FS +G++
Sbjct: 85  DPMNAHFSPDGRYLTFMG-RQNGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFSFDGRQ 143

Query: 272 ALISVQKDEAMDIYSVDLQS----NATERLTNTLF--INISASYSPDSSQIVFESDREGK 325
            ++  + D  +     +       +A + +T+  +         +P    +V+ +     
Sbjct: 144 VVLKHEGDIRLATLVFNGDGSVGVSAWKAVTSDGWSTEESMPFLTPSGKYVVYATGAGDS 203

Query: 326 EQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---KKDGS 381
            ++            + +       + PV                   + ++      G+
Sbjct: 204 LRVVRRNLENGQVSPLATPAAGGRDYYPVVRDYTAYFLSRTQPAGNDQLAMVVPNSPPGT 263

Query: 382 QERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKL 418
              L +          +P +   LIFS      T S L
Sbjct: 264 PAILPLNHCQGDNSDAAPVNEDYLIFSSTSFDPTYSLL 301



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 8/94 (8%)

Query: 358 GDLIAFTKF---SGEKFAIGVMKKDGSQERLLVEDS-NLQAPT---WSPSGRSLIFSRKK 410
           G  + +  +         + +        R L +   N++ P    +SP GR L F  ++
Sbjct: 45  GGRLVYHSYMEYGDGSSNLYLHDFKSKSTRQLNQPGWNIEDPMNAHFSPDGRYLTFMGRQ 104

Query: 411 DGDTGSKLYSIDLNGRNETLINT-PAYASDPQWV 443
           +G      ++I        L         DP++ 
Sbjct: 105 NGAWHVFAWAIGGTQAPSNLTAAIGGRNEDPKFS 138


>gi|312370768|gb|EFR19094.1| hypothetical protein AND_23071 [Anopheles darlingi]
          Length = 381

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 10/181 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S   K SL  ++  G   + L P   +      +SP+ + +A    D      + + D 
Sbjct: 196 GSHEGKISLYSVE-TGKPEQVLDPQNGKFTLSIAYSPDGKYIASGGIDG----IINIFDV 250

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  + +      + +  FS +  + L++   D  M +Y V   S+    L+      
Sbjct: 251 AAGKVAQTLEGHAMSVRSLCFSPD-SQMLLTASDDGHMKLYDV-AHSDVVGTLSGHASWV 308

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S S+S D       S     + + V             +     +   +SP    +   
Sbjct: 309 LSVSFSGDGRTFASSSS---DKTVKVWNVAERQCLHTFDEHADQVWGVRYSPDSASVISV 365

Query: 365 K 365
            
Sbjct: 366 S 366



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 70/202 (34%), Gaps = 16/202 (7%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           +    T   +D ++++ +     +   R         +++   SSNG+    S   D ++
Sbjct: 102 RDFIVTGGVDDTVKIWDVLPDRSKIKLRNTFTGHSLGVVSVDVSSNGEVIA-SSSLDSSL 160

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+  +       ++        + ++SP    I+  S      ++ +        +++ 
Sbjct: 161 CIWKAE-SGQLMNQIALGPVDLWTVAFSPCDKYIISGSHEG---KISLYSVETGKPEQVL 216

Query: 343 QDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSP 399
             +   +     +SP G  IA     G    I +      +    +E   +   +  +SP
Sbjct: 217 DPQNGKFTLSIAYSPDGKYIASGGIDG---IINIFDVAAGKVAQTLEGHAMSVRSLCFSP 273

Query: 400 SGRSLIFSRKKDGDTGSKLYSI 421
             + L+ +     D   KLY +
Sbjct: 274 DSQMLLTASD---DGHMKLYDV 292


>gi|283781101|ref|YP_003371856.1| serine/threonine protein kinase with WD40 repeats [Pirellula staleyi
            DSM 6068]
 gi|283439554|gb|ADB17996.1| serine/threonine protein kinase with WD40 repeats [Pirellula staleyi
            DSM 6068]
          Length = 1122

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 83/232 (35%), Gaps = 21/232 (9%)

Query: 187  GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            G  + ++ + D              + +    F P    +  A  D      V + D   
Sbjct: 887  GAGEGTVVLWDLQARRELRRLQKHKENVTAVAFHPTLPILVSAGLDH----AVIVWDLMT 942

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                 ++    + ILA +FSS+G   L +  +D  + ++    ++     LT      +S
Sbjct: 943  MEPIDQLTGHTAGILAAQFSSDG-VLLATAGEDSTIKLWRFPSRTLEAT-LTGHKLWVLS 1000

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV---WSPQGDLIAF 363
             ++SPD+ Q+   S R+    L+ +     +Q+R +Q             ++  G  +A 
Sbjct: 1001 LAFSPDNRQLASGS-RDRSVMLWDI-----EQRRATQRLSGFTNWVHSVGYTADGKTLAA 1054

Query: 364  TKFS---GEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKD 411
                        + +        R  +E   +++P  + P  +SL  + ++ 
Sbjct: 1055 GSGHYSIDSPGEVRLYDPQAGYLRTTLE--KVRSPILFGPDDQSLYVAVEQG 1104



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 54/355 (15%), Positives = 102/355 (28%), Gaps = 51/355 (14%)

Query: 113  TGRVIKEGKDRLRVEFRLWDVKDRKQIIG------KKFFSSPASWRKIAHTISDDIYQSI 166
            TGR+I  G+D      ++WD+    ++        +    SP      A      I    
Sbjct: 746  TGRLITGGEDSY---LKVWDIATGNEVTNVMRAFVRTVAISPDGREVAAGGRDGRILILE 802

Query: 167  TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG----------------------ANIR 204
              E     S       + ++    + L     DG                          
Sbjct: 803  LPEYPPPASFTPIPHIASMTAAGSDQLIAAGDDGRVYVFHRTSGKLLDTIEVPATNQGPT 862

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                   +       S +QQ +A           V L D +  R  +R+   +  + A  
Sbjct: 863  RALGVEAKSPHAISVSSDQQLLAIGA----GEGTVVLWDLQARRELRRLQKHKENVTAVA 918

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDRE 323
            F        I V       +   DL +     +LT      ++A +S D   +   +  +
Sbjct: 919  FHP---TLPILVSAGLDHAVIVWDLMTMEPIDQLTGHTAGILAAQFSSDGVLLA-TAGED 974

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               +L+   S   +        +       +SP    +A          +  +++  + +
Sbjct: 975  STIKLWRFPSRTLEATL--TGHKLWVLSLAFSPDNRQLASGSRDRSVM-LWDIEQRRATQ 1031

Query: 384  RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            RL    + + +  ++  G++L          GS  YSID  G          Y  
Sbjct: 1032 RLSGFTNWVHSVGYTADGKTLA--------AGSGHYSIDSPGEVRLYDPQAGYLR 1078


>gi|210076194|ref|XP_504209.2| YALI0E20933p [Yarrowia lipolytica]
 gi|146324907|sp|Q6C553|HIR1_YARLI RecName: Full=Protein HIR1
 gi|199426947|emb|CAG79804.2| YALI0E20933p [Yarrowia lipolytica]
          Length = 1058

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 72/216 (33%), Gaps = 27/216 (12%)

Query: 210 RDQILFEPRFSPNQQKVAYATYD--------------DEDILRVYLMDTRIDRAPKRIGN 255
            +  +   RFSP+ + +A  + D               ++       DT      KR+  
Sbjct: 83  HNGAVTVVRFSPDGRYLATGSDDRVVLVWERDSTKVPRKEFGSSGEADTESWIVRKRLAA 142

Query: 256 FRSMILAPRFSSNGKRA--------LISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
             + I    ++ +            +I         I  +D  ++  + +T        A
Sbjct: 143 HDNDIQDLAWAPDSSILVTVGLDSGVIVWSGTTFEKIQRLDAHNSHVKGITFDPANKFFA 202

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKF 366
           + S D +  +F  +R     +    +  +      Q   ++YF    WSP G+ IA    
Sbjct: 203 TASDDRTVQIFRYNRASATDV-TFSTEATITSPFKQSPLSTYFRRCSWSPDGNHIAAANA 261

Query: 367 SGEKFA-IGVMKKDG--SQERLLVEDSNLQAPTWSP 399
           +    + + ++ +    S   L+  ++  +   + P
Sbjct: 262 TNGPVSVVAIINRGTWDSDISLIGHEAPCEVAAFCP 297



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 58/185 (31%), Gaps = 25/185 (13%)

Query: 254 GNFRSMILAPRFSSNGK--------RALISVQKDEAMDIYSVDLQSNAT--------ERL 297
                 +   RFS +G+        R ++  ++D           S           +RL
Sbjct: 81  ATHNGAVTVVRFSPDGRYLATGSDDRVVLVWERDSTKVPRKEFGSSGEADTESWIVRKRL 140

Query: 298 TNTLFINISASYSPDSSQIVFESDREGK--------EQLYVMQSNGSDQKRISQDKEASY 349
                     +++PDSS +V      G         E++  + ++ S  K I+ D    +
Sbjct: 141 AAHDNDIQDLAWAPDSSILVTVGLDSGVIVWSGTTFEKIQRLDAHNSHVKGITFDPANKF 200

Query: 350 FDPVWSPQGDLIA-FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           F      +   I  + + S             S  +     +  +  +WSP G  +  + 
Sbjct: 201 FATASDDRTVQIFRYNRASATDVTFSTEATITSPFKQSPLSTYFRRCSWSPDGNHIAAAN 260

Query: 409 KKDGD 413
             +G 
Sbjct: 261 ATNGP 265



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 43/148 (29%), Gaps = 28/148 (18%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             SG       ++       R    + D  + +  ++P+   +     D      V +  
Sbjct: 124 GSSGEADTESWIV-------RKRLAAHDNDIQDLAWAPDSSILVTVGLDSG----VIVWS 172

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLF 302
                  +R+    S +    F    K    +   D  + I+  +  S     +T +T  
Sbjct: 173 GTTFEKIQRLDAHNSHVKGITFDPANKFFA-TASDDRTVQIFRYNRAS--ATDVTFSTEA 229

Query: 303 INISA-------------SYSPDSSQIV 317
              S              S+SPD + I 
Sbjct: 230 TITSPFKQSPLSTYFRRCSWSPDGNHIA 257


>gi|310828644|ref|YP_003961001.1| hypothetical protein ELI_3069 [Eubacterium limosum KIST612]
 gi|308740378|gb|ADO38038.1| hypothetical protein ELI_3069 [Eubacterium limosum KIST612]
          Length = 382

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 56/131 (42%), Gaps = 5/131 (3%)

Query: 309 YSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           Y P ++ ++F       + K  LY+ +      +  S   + +  +   + Q   I +T+
Sbjct: 205 YYPKNNAVIFTGTDPTDDQKTNLYLSEIKDGSDELSSTLIDENVINFDINRQNGSIIYTQ 264

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS--RKKDGDTGSKLYSIDL 423
             G+   I         +  +V + N  +  ++P+G  ++++     +  T   ++ +D 
Sbjct: 265 NYGDSNRIMSYSISKGAQPSVVSEGNFTSAAYTPNGEKILYTQFSSINTKTSQSIWIMDA 324

Query: 424 NGRNETLINTP 434
           NG+N+  I+ P
Sbjct: 325 NGKNKLQISAP 335


>gi|150866427|ref|XP_001386024.2| hypothetical protein PICST_63551 [Scheffersomyces stipitis CBS
           6054]
 gi|149387683|gb|ABN67995.2| predicted protein [Scheffersomyces stipitis CBS 6054]
          Length = 522

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 70/216 (32%), Gaps = 26/216 (12%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYL----------MDTRIDRAPKRIGNFRS 258
               ++   RFS + + +A        +  V             ++    +     N   
Sbjct: 197 DHSSVVCCVRFSKDGKFIATGCNKTTQVFNVETGELVAKLIDDNNSSDAASAVAAANGDL 256

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIV 317
            I +  FS +GK    +  +D+ + I+  DL +    ++      +  S  + PD  ++V
Sbjct: 257 YIRSVCFSPDGKLLA-TGAEDKLIRIW--DLNTKRIIKILRGHEQDIYSLDFFPDGDRLV 313

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--------SGE 369
             S   G   + +     S    ++   E        SP G LIA            S  
Sbjct: 314 SGS---GDRTVRIWDLRSSQCS-LTLSIEDGVTTVAVSPDGQLIAAGSLDRTVRVWDSTT 369

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            F +  +            + ++ +  ++ +G+ + 
Sbjct: 370 GFLVERLDSGNENGNGNGHEDSVYSVAFTINGKQIA 405



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 35/100 (35%), Gaps = 6/100 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + + D +   I  +    +Q ++   F P+  ++   + D      V + D R
Sbjct: 272 TGAEDKLIRIWDLNTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDR----TVRIWDLR 327

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             +    +      +     S +G+    +   D  + ++
Sbjct: 328 SSQCSLTLSIEDG-VTTVAVSPDGQLIA-AGSLDRTVRVW 365


>gi|3859574|gb|AAC72850.1| activated protein kinase C receptor homolog [Trypanosoma vivax]
          Length = 317

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 77/221 (34%), Gaps = 13/221 (5%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y+ +   +   +      +  +VSG    +L V +  G  +  L  +    +   RFSP 
Sbjct: 103 YKFLGHTRDVLSVAFSPDNRQIVSGSRDRTLRVWNVKGECMHTLNGAHSDWVSCVRFSPA 162

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             K    +   +++++V+     + R    +    + + +   S +G     S   D   
Sbjct: 163 TDKPLIVSGGWDNLVKVWDPAGGVSRVVSELKGHTNYVTSVTVSPDGSLCA-SSDCDGVA 221

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRI 341
            ++ +  + ++   ++    IN    +SP+   +   +D    E + +      D    +
Sbjct: 222 RLWDL-AKGDSLFEMSAGAPIN-QICFSPNRYWMCAATD----ECIRIFDLENKDVIVEL 275

Query: 342 SQDKEAS----YFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           + +   S         WS  G  + ++  +     I  +  
Sbjct: 276 TPEAHGSKPPQCQSIAWSADGSTL-YSGHADNVIRIWTVSL 315



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/250 (15%), Positives = 84/250 (33%), Gaps = 28/250 (11%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS     S+ + +      +Y      + +    FSP+ +++   + D      + + + 
Sbjct: 83  VSASWDRSMRLWNLQNGQCQYKFLGHTRDVLSVAFSPDNRQIVSGSRDR----TLRVWNV 138

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTN---T 300
           + +      G     +   RFS    + LI        ++  V D     +  ++     
Sbjct: 139 KGECMHTLNGAHSDWVSCVRFSPATDKPLIVS--GGWDNLVKVWDPAGGVSRVVSELKGH 196

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S + SPD S     SD +G  +L+ + + G     +S     +     +SP    
Sbjct: 197 TNYVTSVTVSPDGSLCA-SSDCDGVARLWDL-AKGDSLFEMSAGAPINQIC--FSPNRYW 252

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAP------TWSPSGRSLIFSRKKDGD 413
           +     +     I +   +     + L  +++   P       WS  G +L        D
Sbjct: 253 MC----AATDECIRIFDLENKDVIVELTPEAHGSKPPQCQSIAWSADGSTLY---SGHAD 305

Query: 414 TGSKLYSIDL 423
              +++++ L
Sbjct: 306 NVIRIWTVSL 315



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 69/202 (34%), Gaps = 15/202 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                      + +   S N      A++D      + L + +  +   +       +L+
Sbjct: 59  PERRLEGHSAFVSDVALSNNGSFAVSASWDR----SMRLWNLQNGQCQYKFLGHTRDVLS 114

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIVFES 320
             FS + ++ + S  +D  + ++  +++      L N    +  +   +SP + + +  S
Sbjct: 115 VAFSPDNRQIV-SGSRDRTLRVW--NVKGECMHTL-NGAHSDWVSCVRFSPATDKPLIVS 170

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKK 378
                  + V    G   + +S+ K  + +      SP G L A +        +  +  
Sbjct: 171 G-GWDNLVKVWDPAGGVSRVVSELKGHTNYVTSVTVSPDGSLCA-SSDCDGVARLWDL-A 227

Query: 379 DGSQERLLVEDSNLQAPTWSPS 400
            G     +   + +    +SP+
Sbjct: 228 KGDSLFEMSAGAPINQICFSPN 249


>gi|32475823|ref|NP_868817.1| threonine/tyrosine-specific protein kinase [Rhodopirellula baltica SH
            1]
 gi|32446366|emb|CAD76194.1| probable threonine/tyrosine-specific protein kinase [Rhodopirellula
            baltica SH 1]
          Length = 1922

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 83/284 (29%), Gaps = 39/284 (13%)

Query: 171  GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
            G  + R+  V   +  G    ++ + D D                    S +   +A  +
Sbjct: 1324 GAMSMRMDPVHRRLFLGNADATVRIWDIDRGTELGSVRGTGLNDVL-AVSKDGSLLATGS 1382

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSV 287
               E  + V+ +D     +P+ +         + A   S + +    S  +     ++  
Sbjct: 1383 SSAESDVLVWKLDPSKQVSPRLLHRLNGHEESVAALAISPDSQWL-FSGDRAGRGRVW-- 1439

Query: 288  DLQSNATERLTNTLFINI-------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            DLQ+           I+        +AS++ DS  +   SD +   +         D+  
Sbjct: 1440 DLQTGEPV----GEPIDDLLGFRINTASFAGDSKSVWVGSDNQSLMRWRWSDRTWVDR-- 1493

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMKKD-GSQERLLVEDSNLQAP 395
               D      + V SP G        S         +       G Q+RLL E  +    
Sbjct: 1494 --HDTNGFVMNLVVSPDGRQAITIDQSKRTDRTISNVTWWDLSNGKQQRLLSETFSNDQ- 1550

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                       +    G       +   +GR   L+ TPA    
Sbjct: 1551 -----------TSAFGGRPNFGGAAFSTDGRLARLVVTPAGGRS 1583



 Score = 43.5 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 42/272 (15%), Positives = 82/272 (30%), Gaps = 48/272 (17%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             DG +  + T + D  ++  RFSP+  KV  ++ D     RV  +D    R   R+    
Sbjct: 1249 ADGLDA-FETAAHDDEIWSARFSPDGTKVVTSSRD--HTARVLSIDPGTSRFDTRLTISS 1305

Query: 258  SM-----------------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLT 298
                                ++ R     +R  +    D  + I+ +D  +   +     
Sbjct: 1306 DQSSSEEDGGTLEEGSAFGAMSMRMDPVHRRLFL-GNADATVRIWDIDRGTELGSVR--- 1361

Query: 299  NTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQ---DKEASYFDPVW 354
                +N   + S D S +    S  E    ++ +  +     R+       E S      
Sbjct: 1362 -GTGLNDVLAVSKDGSLLATGSSSAESDVLVWKLDPSKQVSPRLLHRLNGHEESVAALAI 1420

Query: 355  SPQGDLIAFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSR 408
            SP    +     +G      V      +        LL     +   +++   +S+    
Sbjct: 1421 SPDSQWLFSGDRAGRG---RVWDLQTGEPVGEPIDDLL--GFRINTASFAGDSKSVWVGS 1475

Query: 409  KKDG----DTGSKLYS--IDLNGRNETLINTP 434
                        + +    D NG    L+ +P
Sbjct: 1476 DNQSLMRWRWSDRTWVDRHDTNGFVMNLVVSP 1507


>gi|116626408|ref|YP_828564.1| hypothetical protein Acid_7370 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229570|gb|ABJ88279.1| hypothetical protein Acid_7370 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 724

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 70/244 (28%), Gaps = 33/244 (13%)

Query: 143 KFFSSPASWRKIAHTISDDIYQ-------------------SITGEKGDFNSRILFVSES 183
            F    A +R  AH  +  I Q                    +    G F+  +    E 
Sbjct: 154 TFLLGTALFRWKAHEAASGINQPRVSWGRVLAKATSEGGSPKVIQASGQFDMLLASPDEQ 213

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            V      S  +     AN    T +  Q       SP+   +    Y    +  V ++D
Sbjct: 214 HVYAECPWSRVLTVIATANDSVSTWTLAQDAGPLAISPDSSTL----YVGSRLGGVVVID 269

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R+ ++I      +     + +G    +++ +     I + + +     +LTN    
Sbjct: 270 AVSGRSKRKIVPTAGPVWDLALTPDGSSLFVAMSQFGVWRISTRNWE---ARQLTN-QGC 325

Query: 304 NISASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
             S   SPD S +V            G + +            +            +SP 
Sbjct: 326 PESLKVSPDGSMLVVNYQCGGPGGSSGHDTVEFYDIEKGQVIGVLAGMPFVGGGASFSPD 385

Query: 358 GDLI 361
           G  +
Sbjct: 386 GRTV 389



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 298 TNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           T TL  +    + SPDSS +   S   G   + V+ +     KR         +D   +P
Sbjct: 237 TWTLAQDAGPLAISPDSSTLYVGSRLGG---VVVIDAVSGRSKRKIVPTAGPVWDLALTP 293

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  + F   S  +F +  +     + R L      ++   SP G  L+ + +  G  GS
Sbjct: 294 DGSSL-FVAMS--QFGVWRISTRNWEARQLTNQGCPESLKVSPDGSMLVVNYQCGGPGGS 350

Query: 417 K 417
            
Sbjct: 351 S 351


>gi|258652675|ref|YP_003201831.1| serine/threonine protein kinase [Nakamurella multipartita DSM
           44233]
 gi|258555900|gb|ACV78842.1| serine/threonine protein kinase [Nakamurella multipartita DSM
           44233]
          Length = 776

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 67/192 (34%), Gaps = 13/192 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +P+ +   +A   +     V ++DT I++    I           FS +G RA +SV 
Sbjct: 495 AITPDGR---FAYIANRAAKVVTVLDTTINKVTATIPIDAGPPQFIAFSPDGSRAYVSVY 551

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
            D+      V + +  T+ LT    +       + +PD + +   S   G   +  + ++
Sbjct: 552 NDDKTINLVVVINTRTTKALTEVP-VEKKPYALAVTPDGTSVWVPSHDAGALDIIDVATD 610

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQ 393
              Q   +     +     +SP G              + V+     +    +   ++  
Sbjct: 611 TVVQ---TLPVAKNPHWVAFSPDGRTAYLANHESN--VLSVIDVASRAVLTTIPVGTSPH 665

Query: 394 APTWSPSGRSLI 405
           +   SP G  ++
Sbjct: 666 SVAVSPDGTQVV 677



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 73/205 (35%), Gaps = 15/205 (7%)

Query: 218 RFSPNQQK-VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FSP+  +       DD+ I  V +++TR  +A   +   +    A   + +G    +  
Sbjct: 538 AFSPDGSRAYVSVYNDDKTINLVVVINTRTTKALTEVPVEKKP-YALAVTPDGTSVWVPS 596

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
               A+DI  +D+ ++   +           ++SPD       +       L V+    S
Sbjct: 597 HDAGALDI--IDVATDTVVQTLPVAKNPHWVAFSPDGRTAYLANHES--NVLSVIDVA-S 651

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQ 393
                +     S      SP G  +    F        V   D + +++L      +N Q
Sbjct: 652 RAVLTTIPVGTSPHSVAVSPDGTQVVVVCFDSND----VYFIDTATDQVLGTIPVGTNPQ 707

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKL 418
             ++S  G+ L ++     +T S +
Sbjct: 708 DISYSADGQYL-YTANVQSNTVSVI 731


>gi|195054196|ref|XP_001994012.1| GH22558 [Drosophila grimshawi]
 gi|193895882|gb|EDV94748.1| GH22558 [Drosophila grimshawi]
          Length = 336

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 64/166 (38%), Gaps = 16/166 (9%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVF 318
           +++   SS+G+    S   D +M ++  + +S   + +LT       +  +SP +  ++ 
Sbjct: 93  VVSVAVSSDGQTIA-SSSLDSSMCLW--NARSGDKKHKLTFGPVDLWTVGFSPCNKYVI- 148

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMK 377
               +GK  + +        +++   +   Y     +SP G  IA     G    I +  
Sbjct: 149 SGLNDGK--ISMYSVETGKAEQVLDAQNGKYTLSIAYSPDGKYIANGAIDG---IITIFD 203

Query: 378 KDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
               +    +E   +   +  +SP+ + L+       D   KLY +
Sbjct: 204 VAAGKVAQTLEGHAMPVRSLCFSPNSQMLLTGSD---DGHMKLYDV 246



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 84/248 (33%), Gaps = 18/248 (7%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D + I      SS   W        D  ++   G    +       ++ V+SG+    + 
Sbjct: 101 DGQTIASSSLDSSMCLWNA---RSGDKKHKLTFGPVDLWTVGFSPCNKYVISGLNDGKIS 157

Query: 195 VMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           +     G   + L     +      +SP+ + +A    D      + + D    +  + +
Sbjct: 158 MYSVETGKAEQVLDAQNGKYTLSIAYSPDGKYIANGAIDG----IITIFDVAAGKVAQTL 213

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                 + +  FS N  + L++   D  M +Y V   S+    L+      +  S+S D 
Sbjct: 214 EGHAMPVRSLCFSPN-SQMLLTGSDDGHMKLYDV-AHSDVVGTLSGHASWVLCVSFSEDG 271

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKF 371
                 S  +   +++    + +++K +    E +   +   +SP  D +  +    +  
Sbjct: 272 KHFA-SSSSDRSVKVW----DTAERKCLHTFSEHTDQVWGVRYSPGNDKVI-SASEDKSL 325

Query: 372 AIGVMKKD 379
            I     +
Sbjct: 326 NIYYCPPN 333


>gi|308270172|emb|CBX26784.1| hypothetical protein N47_A08130 [uncultured Desulfobacterium sp.]
          Length = 428

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/235 (15%), Positives = 77/235 (32%), Gaps = 38/235 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +    +  L+    SP+ + VA   +  +D +    +Y  D    +  +R+G F ++I A
Sbjct: 81  IDAGHEGQLYAIAVSPDGKTVATGGWTGWDRDKKTSIYFFDVLSGQLTRRLGGFDNVINA 140

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             +  +GK   + +Q      +  ++               ++   Y  D    + + D 
Sbjct: 141 LAWMPDGKHLAVGLQGYSGFRMLRIE-DGKTV-------AADVG--YQDD----IMDLDI 186

Query: 323 EGKEQLYVMQSNGSDQ----------KRISQDKEASYFDPVWSPQGDLIAF-------TK 365
             + ++ V   +G  +          +R     +       +SP  +LIA          
Sbjct: 187 SSRGRIVVTALDGFVRLYDHKFKLIGRRAIPGGKKPVSV-RFSPDAELIAVGFIDVPAIS 245

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               K        D  +   +       +  WS  G SL    +  G+  + +Y 
Sbjct: 246 VISAKDLSLKYHPDTGK---IEHQVGFTSVVWSSDGLSLFAGGQYSGEGLNPVYR 297


>gi|149247088|ref|XP_001527969.1| periodic tryptophan protein 2 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146447923|gb|EDK42311.1| periodic tryptophan protein 2 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 935

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 69/199 (34%), Gaps = 13/199 (6%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG N+  L       +     +   + +A+ +     +L VY   +      K+ G+F 
Sbjct: 284 SDGFNLIQLLSMGQNTINTVSINKTGEWLAFGSSKLGQLL-VYEWQSE-SYILKQQGHFD 341

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQI 316
           +M     +S +G R +++   D  + I+  D+ S       T          ++     +
Sbjct: 342 AMNTL-CYSPDGSR-VVTGSDDGKIKIW--DVASGFCLMTFTEHTSAVTQVQFAKKG-HV 396

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +F S  +G  + Y +     + K  +      +      P G+++         F I V 
Sbjct: 397 LFSSSLDGTIRAYDL-IRFRNFKTFTATSRVQFNCLAVDPSGEVVVGGSQD--TFEIYVW 453

Query: 377 KKDGSQERLLVEDSNLQAP 395
                  +LL   +  + P
Sbjct: 454 SVQTG--QLLDSLTGHEGP 470


>gi|317149882|ref|XP_001823372.2| NACHT and WD40 domain protein [Aspergillus oryzae RIB40]
          Length = 1363

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 85/230 (36%), Gaps = 22/230 (9%)

Query: 219  FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FSP    +   +       I R    +T+ D   + + +  S +    FS +G+    S 
Sbjct: 857  FSPQSSIIRREFQKEIPAWITRFPSAETQWDAVLQSL-DHPSAVRFTCFSPDGRFLASSS 915

Query: 277  QKDEAMD---IYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                  +   I   D  + A ++   +TN++    S ++SPDS ++           + V
Sbjct: 916  WAGPIAEYSIINICDPNTGALKQRLKITNSMS---SLAFSPDSQRLAAT---CWDNWIRV 969

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED- 389
              +    + ++    E S         G+ +  +       +I  +K   S  ++ +E  
Sbjct: 970  WDTVTWTEIKVPHQYERSAVGFTS---GNELLVSTAGFSTLSIWDIKTSASDPKIKIETH 1026

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            + + A ++SP    L   R+   D   K+++       +TL++      D
Sbjct: 1027 AEIGAVSFSPDAALLAHIRR---DRTIKIWNTSTGALEQTLVDQLGSIED 1073



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 62/184 (33%), Gaps = 13/184 (7%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                 +    FSP+ + +A +++     +   + + D       +R+    SM     FS
Sbjct: 894  DHPSAVRFTCFSPDGRFLASSSWAGPIAEYSIINICDPNTGALKQRLKITNSMSSL-AFS 952

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             + +R   +   D  + ++     +     +        SA      ++++  +   G  
Sbjct: 953  PDSQRLA-ATCWDNWIRVW----DTVTWTEIKVPHQYERSAVGFTSGNELLVST--AGFS 1005

Query: 327  QLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             L +     S    +I  +  A      +SP   L+A  +       I      G+ E+ 
Sbjct: 1006 TLSIWDIKTSASDPKIKIETHAEIGAVSFSPDAALLAHIRRD-RTIKIW-NTSTGALEQT 1063

Query: 386  LVED 389
            LV+ 
Sbjct: 1064 LVDQ 1067


>gi|193214204|ref|YP_001995403.1| WD40 domain-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193087681|gb|ACF12956.1| WD-40 repeat protein [Chloroherpeton thalassium ATCC 35110]
          Length = 317

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/219 (16%), Positives = 80/219 (36%), Gaps = 34/219 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS + Q+ A        +   ++ D    +    + +    I + +FS NGK    S  +
Sbjct: 28  FSHDGQRFA----AAGGLRAAFIYDLHKAKPIGGLLDHSQSIYSVKFSKNGKW-FFSTGR 82

Query: 279 DEAMDIY-------------SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           D  + +Y               DL+S   + + N        + +PD + +       G 
Sbjct: 83  DGKVMVYDAEKFDKIAVLLPEFDLESAPPQIIPNFT-----LALNPDQTLLA-VGASGGV 136

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            +LY  +++     ++    + +     +SP G+L A          + ++  +  +E  
Sbjct: 137 MRLY--RTDDWSLHKVLPLHQGNIRSIAFSPNGELCATGSSDR---MVKILDGNTFEELQ 191

Query: 386 LVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSID 422
            +E       +  +SP G++         D   +++S+D
Sbjct: 192 TIEGHGDVVFSVRFSPDGKTFA---TGGKDARLRIWSVD 227



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 81/265 (30%), Gaps = 35/265 (13%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G  +    F +   +       L      G           Q ++  +FS N +      
Sbjct: 27  GFSHDGQRFAAAGGLRAAFIYDLHKAKPIGG-----LLDHSQSIYSVKFSKNGKWFFSTG 81

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---------RFSSNGKRALISVQKDEA 281
            D +    V + D         +     +  AP           + +     +       
Sbjct: 82  RDGK----VMVYDAEKFDKIAVLLPEFDLESAPPQIIPNFTLALNPDQTLLAVGAS-GGV 136

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKR 340
           M +Y  D   +  + L        S ++SP+        SDR     + ++  N  ++ +
Sbjct: 137 MRLYRTD-DWSLHKVLPLHQGNIRSIAFSPNGELCATGSSDR----MVKILDGNTFEELQ 191

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS----QERLLVEDSNLQAPT 396
             +      F   +SP G   A     G+   + +   DG     + +LL     +++  
Sbjct: 192 TIEGHGDVVFSVRFSPDGKTFA---TGGKDARLRIWSVDGKKFTPKVKLLAHTFAIKSMQ 248

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
           + P+   L+   +   D   KL+ +
Sbjct: 249 FLPNAHELVTVSQ---DKTIKLWDL 270



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 65/177 (36%), Gaps = 15/177 (8%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     + +   D  ++  + P     +    FSPN +  A  + D      V ++D   
Sbjct: 131 GASGGVMRLYRTDDWSLHKVLPLHQGNIRSIAFSPNGELCATGSSDR----MVKILDGNT 186

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFIN 304
               + I     ++ + RFS +GK    +  KD  + I+SVD +  +   + L +T  I 
Sbjct: 187 FEELQTIEGHGDVVFSVRFSPDGKTFA-TGGKDARLRIWSVDGKKFTPKVKLLAHTFAIK 245

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY----FDPVWSPQ 357
            S  + P++ ++V  S     + + +         +I       +         SP 
Sbjct: 246 -SMQFLPNAHELVTVSQ---DKTIKLWDLEKMLATQIIDKTCGGHAFTINSVDLSPD 298


>gi|83772109|dbj|BAE62239.1| unnamed protein product [Aspergillus oryzae]
          Length = 1289

 Score = 52.7 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 85/230 (36%), Gaps = 22/230 (9%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           FSP    +   +       I R    +T+ D   + + +  S +    FS +G+    S 
Sbjct: 783 FSPQSSIIRREFQKEIPAWITRFPSAETQWDAVLQSL-DHPSAVRFTCFSPDGRFLASSS 841

Query: 277 QKDEAMD---IYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                 +   I   D  + A ++   +TN++    S ++SPDS ++           + V
Sbjct: 842 WAGPIAEYSIINICDPNTGALKQRLKITNSMS---SLAFSPDSQRLAAT---CWDNWIRV 895

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED- 389
             +    + ++    E S         G+ +  +       +I  +K   S  ++ +E  
Sbjct: 896 WDTVTWTEIKVPHQYERSAVGFTS---GNELLVSTAGFSTLSIWDIKTSASDPKIKIETH 952

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           + + A ++SP    L   R+   D   K+++       +TL++      D
Sbjct: 953 AEIGAVSFSPDAALLAHIRR---DRTIKIWNTSTGALEQTLVDQLGSIED 999



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 62/184 (33%), Gaps = 13/184 (7%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                +    FSP+ + +A +++     +   + + D       +R+    SM     FS
Sbjct: 820 DHPSAVRFTCFSPDGRFLASSSWAGPIAEYSIINICDPNTGALKQRLKITNSMSSL-AFS 878

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            + +R   +   D  + ++     +     +        SA      ++++  +   G  
Sbjct: 879 PDSQRLA-ATCWDNWIRVW----DTVTWTEIKVPHQYERSAVGFTSGNELLVST--AGFS 931

Query: 327 QLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            L +     S    +I  +  A      +SP   L+A  +       I      G+ E+ 
Sbjct: 932 TLSIWDIKTSASDPKIKIETHAEIGAVSFSPDAALLAHIRRD-RTIKIW-NTSTGALEQT 989

Query: 386 LVED 389
           LV+ 
Sbjct: 990 LVDQ 993


>gi|325915020|ref|ZP_08177349.1| YVTN family beta-propeller repeat protein [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325538718|gb|EGD10385.1| YVTN family beta-propeller repeat protein [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 356

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 52/130 (40%), Gaps = 10/130 (7%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  Q       EG+ Q+ ++ +     +++   +  +     ++P G  +  +     
Sbjct: 144 SPDGKQFAVCV--EGQNQVMLIDAAQFRVQQVIATRGQAPEHCAYTPDGRWLLTSNEGSN 201

Query: 370 KFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                +++    Q R ++    + +   ++P GRS+  ++    +T + +  IDL  R  
Sbjct: 202 DMD--MIELATQQSRGVVATSGHPRGMAFAPDGRSVYIAQ----ETANVVDVIDLQTRT- 254

Query: 429 TLINTPAYAS 438
              + PA   
Sbjct: 255 RRASLPAGVR 264



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 84/246 (34%), Gaps = 25/246 (10%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFE---------PRFSPNQQKVAYATYDDEDILRVY 240
           +  L ++D +   +  L  ++D +L +            SP+ ++ A           V 
Sbjct: 105 QGQLYLIDAEHHRLIELDTAKDAVLRQVDIGENAEGIALSPDGKQFAVCVEGQNQ---VM 161

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L+D    R  + I           ++ +G+  L     + + D+  ++L +  +  +  T
Sbjct: 162 LIDAAQFRVQQVIATRGQAPEHCAYTPDGRWLL--TSNEGSNDMDMIELATQQSRGVVAT 219

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                  +++PD    V+ +       + V+    +  +R S            S  G  
Sbjct: 220 SGHPRGMAFAPDGRS-VYIAQET-ANVVDVIDLQ-TRTRRASLPAGVRTAGVTLSADGTR 276

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           +  +       ++     D +  R L E         P  +P+G  L +      +T S 
Sbjct: 277 LYASNGGAGTVSV----IDTATARSLAEIPVGLRPWNPALTPAGDKL-YVANGRSNTVSV 331

Query: 418 LYSIDL 423
           + ++ L
Sbjct: 332 IDTVSL 337



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 74/186 (39%), Gaps = 11/186 (5%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +N + ++D     ++ +  +R Q      ++P+ + +  +     D+  + L   +   
Sbjct: 156 GQNQVMLIDAAQFRVQQVIATRGQAPEHCAYTPDGRWLLTSNEGSNDMDMIELATQQSRG 215

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
                G+ R M     F+ +G+   I+  ++ A  +  +DLQ+  T R +    +  +  
Sbjct: 216 VVATSGHPRGM----AFAPDGRSVYIA--QETANVVDVIDLQTR-TRRASLPAGVRTAGV 268

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + S D +++ + S+  G   + V+ +  +            + +P  +P GD +      
Sbjct: 269 TLSADGTRL-YASN-GGAGTVSVIDTATARSLAEIPVGLRPW-NPALTPAGDKLYVANGR 325

Query: 368 GEKFAI 373
               ++
Sbjct: 326 SNTVSV 331


>gi|225562631|gb|EEH10910.1| extracellular dipeptidyl-peptidase Dpp4 [Ajellomyces capsulatus
           G186AR]
          Length = 1281

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 25/125 (20%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             ++      +   +++D+        WSP G+ IA+ +  G    I    KDG+  ++ 
Sbjct: 627 NYFIQDVESGELTPLAKDQAGDLQYAAWSPVGNAIAYVR--GNNLFIW---KDGTTTQIT 681

Query: 387 VEDS---NLQAPTW---------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +         P W               SP G+ L F R    +TG   Y++     N+
Sbjct: 682 SDGGVDTFNGVPDWVYEEEIFGDRYALWFSPDGQYLAFLRFD--ETGVPTYTVPYYMGNQ 739

Query: 429 TLINT 433
            +  +
Sbjct: 740 EVPPS 744



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 46/168 (27%), Gaps = 30/168 (17%)

Query: 221 PNQQKVAYATYDDEDILRVY-----LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P+   V +AT   +     Y     + D           +    +    +S  G      
Sbjct: 605 PDLSAVMWATNYTKQYRHSYFANYFIQDVESGELTPLAKDQAGDLQYAAWSPVGNAIAYV 664

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASY---------------SPDSSQIV 317
             +   + I+    +   T ++T+   ++       +               SPD   + 
Sbjct: 665 --RGNNLFIW----KDGTTTQITSDGGVDTFNGVPDWVYEEEIFGDRYALWFSPDGQYLA 718

Query: 318 FES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           F   D  G     V    G+ +   S  KE     P  S     + F 
Sbjct: 719 FLRFDETGVPTYTVPYYMGNQEVPPSYPKELDIRYPKVSQTNPRVEFH 766



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/149 (10%), Positives = 40/149 (26%), Gaps = 25/149 (16%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQIL 214
            + DD ++          S +++ +            +  + D +   +  L   +   L
Sbjct: 593 RVPDDAHEYFLKPD---LSAVMWATNYTKQYRHSYFANYFIQDVESGELTPLAKDQAGDL 649

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF--------- 265
               +SP    +AY          +++            G   +    P +         
Sbjct: 650 QYAAWSPVGNAIAYV-----RGNNLFIWKDGTTTQITSDGGVDTFNGVPDWVYEEEIFGD 704

Query: 266 ------SSNGKRALISVQKDEAMDIYSVD 288
                 S +G+        +  +  Y+V 
Sbjct: 705 RYALWFSPDGQYLAFLRFDETGVPTYTVP 733


>gi|194208130|ref|XP_001915423.1| PREDICTED: similar to WD repeat-containing protein 8 [Equus
           caballus]
          Length = 502

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D +   I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDVNTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYKRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             RI    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --RIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACQQGITF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + V   +     R             W+P G ++A    +  
Sbjct: 142 TRDGRYMALAERRDCKDYVSVFVCSDWQLLRHFDTDTQDLAGIEWAPNGCVLA-VWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKD 411
           ++ + +   DG   RLL           +++  WSPS + L       
Sbjct: 201 EYKVLLYSLDG---RLLSAYCAYEWSLGIKSVAWSPSSQFLAVGSYDG 245



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 50/148 (33%), Gaps = 9/148 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK     VQ      +   D+ +    +L   L       +S DS  I+    + G
Sbjct: 16  FSPDGKYLASCVQ----YRLVVRDVNTLQILQLYTCLDQIQHIEWSADSLFILCAMYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++      +    +  A      WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQPEWHCR--IDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSVS 127

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKD 411
            +       Q  T++  GR +  + ++D
Sbjct: 128 YIKYPKACQQGITFTRDGRYMALAERRD 155


>gi|321457094|gb|EFX68187.1| hypothetical protein DAPPUDRAFT_330309 [Daphnia pulex]
          Length = 611

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 77/221 (34%), Gaps = 33/221 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           ++SP+   +A  + D    +R++    +       +  F   I    +S + +R ++  +
Sbjct: 74  KYSPSGFYIA--SADQSGKVRIWDTVNKEHICKIELQPFAGPIKDLAWSPDNQRMVVVGE 131

Query: 278 KDE-AMDIYSVDLQ------SNATERLTNTLFINISAS----YSPDSSQIVFESDREGKE 326
             E    ++ VD           ++ + +  F           S D+S  VF    EG  
Sbjct: 132 GRECFGHVFLVDTGTSNGTIGGPSKPINSCDFRPARPFKIIAGSEDNSVTVF----EGPP 187

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-- 384
             +  +   ++ +R  Q          +SP GD  A   F G    I V     S     
Sbjct: 188 --FKWKMTKTEHQRFVQ-------SVRYSPNGDHFATGGFDG---KIFVYDGKTSDLIGE 235

Query: 385 --LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 +  + A +WSP  ++L+ +          + ++ L
Sbjct: 236 LGSPAHNGGVYAVSWSPDSKTLLSASGDKTCKTWDIATMSL 276


>gi|242040759|ref|XP_002467774.1| hypothetical protein SORBIDRAFT_01g033820 [Sorghum bicolor]
 gi|241921628|gb|EER94772.1| hypothetical protein SORBIDRAFT_01g033820 [Sorghum bicolor]
          Length = 437

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 61/168 (36%), Gaps = 12/168 (7%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDS 313
            F   + +   S +GK   +     ++ +    D QS      L      + S+++ PD 
Sbjct: 262 TFPWSVNSTSVSPDGKLLAV---LGDSTECVIADPQSGRATATLRGHQDYSFSSAWHPDG 318

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +    +++G  +L+  + + S+   + + +  +     +SP G    F   +     +
Sbjct: 319 RVLA-TGNQDGTCRLWDAR-SLSEPFAVLKGRIGAVRGLRFSPDGGR--FLAAAEAADFV 374

Query: 374 GVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            V         +E+ +     +    +SP G +L F    D   G  L
Sbjct: 375 HVYDAAAGYVGREQEVELFGEVAGAAFSPDGEAL-FVSVADRTYGGLL 421



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 52/155 (33%), Gaps = 9/155 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + +A       D     + D +  RA   +   +    +  +  +G+    +  
Sbjct: 271 SVSPDGKLLAV----LGDSTECVIADPQSGRATATLRGHQDYSFSSAWHPDGRVLA-TGN 325

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D    ++     S     L   +       +SPD  +  F +  E  + ++V  +    
Sbjct: 326 QDGTCRLWDARSLSEPFAVLKGRIGAVRGLRFSPDGGR--FLAAAEAADFVHVYDAAAGY 383

Query: 338 QKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             R  + +         +SP G+ + F   +   +
Sbjct: 384 VGREQEVELFGEVAGAAFSPDGEAL-FVSVADRTY 417



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 49/151 (32%), Gaps = 10/151 (6%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
                + D                 F   + P+ + +A    D        L D R    
Sbjct: 285 STECVIADPQSGRATATLRGHQDYSFSSAWHPDGRVLATGNQDG----TCRLWDARSLSE 340

Query: 250 PKRIGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           P  +   R   +   RFS +G R L + +  + + +Y         E+          A+
Sbjct: 341 PFAVLKGRIGAVRGLRFSPDGGRFLAAAEAADFVHVYDAAAGYVGREQEVELFGEVAGAA 400

Query: 309 YSPDSSQIVFES--DR--EGKEQLYVMQSNG 335
           +SPD   + F S  DR   G  +    +++G
Sbjct: 401 FSPDGEAL-FVSVADRTYGGLLEFRRRRADG 430



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 31/112 (27%), Gaps = 4/112 (3%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             + T    +N S S SPD   +    D     +  +            +  +   F   
Sbjct: 258 LSQFTFPWSVN-STSVSPDGKLLAVLGDST---ECVIADPQSGRATATLRGHQDYSFSSA 313

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           W P G ++A     G                L      ++   +SP G   +
Sbjct: 314 WHPDGRVLATGNQDGTCRLWDARSLSEPFAVLKGRIGAVRGLRFSPDGGRFL 365


>gi|303285097|ref|XP_003061839.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457169|gb|EEH54469.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 659

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/270 (15%), Positives = 82/270 (30%), Gaps = 33/270 (12%)

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAH-TISDDIYQSITGEKGDFNSRILFVSESV 184
           V     DV     +      S       +   + SDD         G+ +     V+ + 
Sbjct: 346 VSCLAVDVDGGGDVFSASLSSLAGGDAVVIRWSESDDGGDWSAVVSGEKHGHKSVVAITA 405

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-KVAYATYDDEDILRVYLMD 243
                   L V   D   +  ++ + +  + +  + P    K+     D +      L  
Sbjct: 406 KGAGGGRVLTVGMDDTLRVIMVSENTEGGVGDFAYVPGAALKLTEQPRDVDADASGALAV 465

Query: 244 TRIDRAPKRIGNFRSMILAP----------RFSSNGKRALISVQKDEAMDIYSVD----- 288
               R  + + +     L+P            S +G    +   KD A+ ++++      
Sbjct: 466 VATTRGFELVHSAGYTALSPEGGAERVLTAGMSPDGGEVAV-GCKDGAVHVFAISKSTND 524

Query: 289 -----LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                L +  T  L+       SA YSP   ++      +G  ++ V  +   +   +  
Sbjct: 525 GGGGSLNTTETRVLSRHRGEVTSARYSPCGGKLATC---DGNREVVVWDARSGE---VIY 578

Query: 344 DK----EASYFDPVWSPQGDLIAFTKFSGE 369
           DK    +A      WSP    +A     G 
Sbjct: 579 DKAVFHKARVTAVAWSPDSRRLATGSLDGG 608



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 47/151 (31%), Gaps = 24/151 (15%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ---SNGSD------ 337
           +  +  A   LT  +        SPD  ++     ++G   ++ +    ++G        
Sbjct: 483 LSPEGGAERVLTAGM--------SPDGGEVA-VGCKDGAVHVFAISKSTNDGGGGSLNTT 533

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQA 394
           + R+            +SP G  +A          + V      +    + +   + + A
Sbjct: 534 ETRVLSRHRGEVTSARYSPCGGKLATC---DGNREVVVWDARSGEVIYDKAVFHKARVTA 590

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             WSP  R L       G     L    ++G
Sbjct: 591 VAWSPDSRRLATGSLDGGVIVWDLAKPAMSG 621



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 5/114 (4%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           D   +V+ S R     +  +  +  +     R+  D + S      SP G+ IA    SG
Sbjct: 33  DGGVLVYASGRA--VVVRALDDDAKNNDVAPRLYHDHQYSTTCARPSPNGEWIASGDVSG 90

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                G+      +         +    WS  G+ ++ S    G   +K ++ D
Sbjct: 91  RVRVWGLNDDFTLKAEHRPIAGAVDDIAWSADGQRIVASGDGKGGVFAKAFAWD 144


>gi|224026856|ref|ZP_03645222.1| hypothetical protein BACCOPRO_03615 [Bacteroides coprophilus DSM
           18228]
 gi|224020092|gb|EEF78090.1| hypothetical protein BACCOPRO_03615 [Bacteroides coprophilus DSM
           18228]
          Length = 733

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 81/222 (36%), Gaps = 37/222 (16%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQKVAYA 229
            F   +L +  + +    K +L  + +     + ++  +  +      + S + +++   
Sbjct: 4   FFTLLLLAIFVTGIQAQQKVTLRDIAQGTYRAQGISGLKPMLDGEHYTQISSDHKRIVKY 63

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------SVQKDEAMD 283
           ++   + +      T        + +F   IL    S + K  LI        +      
Sbjct: 64  SFKTGEEVGTLFDVTTARDC--DLKSFDDYIL----SPDEKLILIQTETKPIYRHSFTAV 117

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSDQKRIS 342
            Y  ++++N  E L+N         +SPD +QI F         +Y+++   G+ + +++
Sbjct: 118 YYIYNVKNNKMEPLSNN-GPQQVPLFSPDGNQIAFVR----NNNIYLVKLLFGNSESQVT 172

Query: 343 QDKEASY---FDPVW--------------SPQGDLIAFTKFS 367
           +D E ++     P W              S    +IA+ +F 
Sbjct: 173 KDGEYNHVLNGIPDWVYEEEFSFNRAFDFSADSKMIAYVRFD 214



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 18/109 (16%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           S+ D + SP   LI     +   +         +     ++   L  +   Q P +SP G
Sbjct: 87  SFDDYILSPDEKLILIQTETKPIYRHSFTAVYYIYNVKNNKMEPLSNNGPQQVPLFSPDG 146

Query: 402 RSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASD-----PQWVG 444
             + F R       + +Y +  L G +E+ +      +      P WV 
Sbjct: 147 NQIAFVRN------NNIYLVKLLFGNSESQVTKDGEYNHVLNGIPDWVY 189



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 85/240 (35%), Gaps = 22/240 (9%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y+    + G+ NS++   +  + S + +     +D DG   R    S            +
Sbjct: 243 YEYKYPKAGEVNSKVSVHTYDIKSHVTRKMDLQIDSDGYIPRIKFTS------------D 290

Query: 223 QQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFS-----SNGKRALIS 275
            +K+A  T    ++ L +Y+ + R       I +     +    +S        +  ++ 
Sbjct: 291 PEKLAIMTLNRHQNRLDLYMANPRSGLCKVAIRDEAEQYIKESAYSNIKFYP--EHIVMM 348

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSN 334
            +KD    +Y   +  N  +++T   F   S   +   ++   + S+     +  + + +
Sbjct: 349 SEKDGYNHLYLYTIAGNLVKQITKGQFEITSFLGWDQKANVFYYASNEGSPLRTAIYKID 408

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G  +K     +  S      + Q   I           I +    G +   L+++S L+A
Sbjct: 409 GKGKKTKLSTRTGSNSAIFSTNQKYYINTFSNISTPTLITLNDNRGKELTTLLDNSKLKA 468



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 36/101 (35%), Gaps = 26/101 (25%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLL 386
            Y+     +  + +S +       P++SP G+ IAF + +     I ++K   G+ E  +
Sbjct: 118 YYIYNVKNNKMEPLSNNGPQQV--PLFSPDGNQIAFVRNN----NIYLVKLLFGNSESQV 171

Query: 387 VEDSNLQA-----PTW--------------SPSGRSLIFSR 408
            +D          P W              S   + + + R
Sbjct: 172 TKDGEYNHVLNGIPDWVYEEEFSFNRAFDFSADSKMIAYVR 212



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 79/209 (37%), Gaps = 19/209 (9%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRAL-ISVQKDEA-MDIYSVDLQSN 292
           + V+  D +     K      S    PR  F+S+ ++   +++ + +  +D+Y  + +S 
Sbjct: 257 VSVHTYDIKSHVTRKMDLQIDSDGYIPRIKFTSDPEKLAIMTLNRHQNRLDLYMANPRSG 316

Query: 293 --------ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
                     E+         +  + P    IV  S+++G   LY+    G+  K+I++ 
Sbjct: 317 LCKVAIRDEAEQYIKESAY-SNIKFYP--EHIVMMSEKDGYNHLYLYTIAGNLVKQITKG 373

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRS 403
           +        W  + ++  +    G      + K DG  ++  L   +   +  +S + + 
Sbjct: 374 QFEITSFLGWDQKANVFYYASNEGSPLRTAIYKIDGKGKKTKLSTRTGSNSAIFSTNQKY 433

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +       +   L +++ + R + L  
Sbjct: 434 --YINTFSNISTPTLITLN-DNRGKELTT 459


>gi|290963153|ref|YP_003494335.1| hypothetical protein SCAB_88761 [Streptomyces scabiei 87.22]
 gi|260652679|emb|CBG75812.1| putative secreted protein [Streptomyces scabiei 87.22]
          Length = 372

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/250 (16%), Positives = 81/250 (32%), Gaps = 33/250 (13%)

Query: 210 RDQILFEPRFSPNQQKVAYATY------DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            D        + + +++A++++      D     RV++ D R     K++    S +  P
Sbjct: 64  GDGDSAGATITADGRRIAFSSFAKNLTSDPSSAERVFVRDRRTGLN-KQMTTITSPMQRP 122

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----FE 319
             S +G+   +          +   + S +T  +          S S D   +     F 
Sbjct: 123 VISGDGQYVALWGMLFRDTKTFLSQVSSGSTIGVNCPGLSCSQPSLSTDGRYMAHVATF- 181

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S    ++++ V        + +++        P  S  G  +A+    G    + V  + 
Sbjct: 182 SRPPARQRIEVRDWRTDTARTVAELGHTVSARPSVSGDGRFVAY--QDGRAEDVFVWDRT 239

Query: 380 GSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                       ++ P         S  GR+ ++        GS  Y  D +   E L+ 
Sbjct: 240 DD-----TSSGPIEGPARAATLVQLSKDGRNAVYLS------GSDTYVHDESSGTEQLVP 288

Query: 433 TP-AYASDPQ 441
           T    A DP 
Sbjct: 289 TVRGVAIDPT 298



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 47/165 (28%), Gaps = 13/165 (7%)

Query: 254 GNFRSMILAPRFSSNGKRALISV-------QKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                       +++G+R   S            A  ++  D ++   +++T        
Sbjct: 62  TEGDGDSAGATITADGRRIAFSSFAKNLTSDPSSAERVFVRDRRTGLNKQMTTITSPMQR 121

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-- 364
              S D   +          + ++ Q +      +      S   P  S  G  +A    
Sbjct: 122 PVISGDGQYVALWGMLFRDTKTFLSQVSSGSTIGV-NCPGLSCSQPSLSTDGRYMAHVAT 180

Query: 365 -KFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIF 406
                 +  I V        R + E  +  +  P+ S  GR + +
Sbjct: 181 FSRPPARQRIEVRDWRTDTARTVAELGHTVSARPSVSGDGRFVAY 225



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/205 (14%), Positives = 61/205 (29%), Gaps = 12/205 (5%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           S +      + R +    +      +  + V D      R +      +   P  S + +
Sbjct: 162 SCSQPSLSTDGRYMAHVATFSRPPARQRIEVRDWRTDTARTVAELGHTVSARPSVSGDGR 221

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            VAY    D     V++ D   D +   I          + S +G+ A+         D 
Sbjct: 222 FVAY---QDGRAEDVFVWDRTDDTSSGPIEGPARAATLVQLSKDGRNAVYLS----GSDT 274

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           Y  D  S   + +     +    +  P    +++         L +        + +S  
Sbjct: 275 YVHDESSGTEQLVPTVRGV----AIDPTGRYLLYAPHDTSGPSLVLRDLETGSDEVVST- 329

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGE 369
           + A+      S  G  + F   + +
Sbjct: 330 QPATAGTDAVSSGGRDVVFHSTADD 354



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 30/222 (13%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDIL--RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +P  S + + +A+           R+ + D R D A        ++   P  S +G+ 
Sbjct: 163 CSQPSLSTDGRYMAHVATFSRPPARQRIEVRDWRTDTARTVAELGHTVSARPSVSGDGRF 222

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YSPDSSQIVFESDREGK 325
                Q   A D++  D   +     T++  I   A        S D    V+ S  +  
Sbjct: 223 VAY--QDGRAEDVFVWDRTDD-----TSSGPIEGPARAATLVQLSKDGRNAVYLSGSD-- 273

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQER 384
              YV   +   ++ +      +       P G  + +        ++ +     GS E 
Sbjct: 274 --TYVHDESSGTEQLV-----PTVRGVAIDPTGRYLLYAPHDTSGPSLVLRDLETGSDEV 326

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +  + +       S  GR ++F    D      +   D NG+
Sbjct: 327 VSTQPATAGTDAVSSGGRDVVFHSTAD-----DIVPGDTNGK 363



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 42/145 (28%), Gaps = 15/145 (10%)

Query: 275 SVQKDEAMDIYSVDLQSNATERL------TNTLFINISASYSPDSSQIVF-------ESD 321
           +   +        +      ER+      T     +  A+ + D  +I F        SD
Sbjct: 33  AASAEPRSVPAVANDGGAGVERVSVAADGTEGDGDSAGATITADGRRIAFSSFAKNLTSD 92

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               E+++V        K+++         PV S  G  +A            + +    
Sbjct: 93  PSSAERVFVRDRRTGLNKQMTTITS-PMQRPVISGDGQYVALWGMLFRDTKTFLSQVSSG 151

Query: 382 QERLLVEDSNLQA-PTWSPSGRSLI 405
               +       + P+ S  GR + 
Sbjct: 152 STIGVNCPGLSCSQPSLSTDGRYMA 176


>gi|226290461|gb|EEH45945.1| minichromosome loss protein [Paracoccidioides brasiliensis Pb18]
          Length = 829

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 80/249 (32%), Gaps = 23/249 (9%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   +   F+       + +  L     D   +R   P RD  L     S +   VA A+
Sbjct: 62  GIVATNDSFIMGGEDGTVWRYELETGQMDKLLVRCALPVRDLSL-----SKDGDWVAVAS 116

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D    L V +++       K +      +    F  +G+   +S   D  + IYSVD  
Sbjct: 117 DD----LVVKIVNIHDMTIVKYLREQSKGVKHVTFDPSGRFIAVSGS-DGIIYIYSVDGP 171

Query: 291 --------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                        RL         A + P+     F +    ++   V  S+ + Q    
Sbjct: 172 QPELVKKIDGIIGRLETDNEATSRAVWHPEGR--AFVAVEPTRDIAIVAVSDWTKQNVFP 229

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
               A      WSP G L+A    +G    I + +    +     +  N+    W P   
Sbjct: 230 AGHNADITALAWSPNGALLA---SAGADRQIVLWETKTQKILRRYDIPNVINLAWHPVDN 286

Query: 403 SLIFSRKKD 411
           +L F+    
Sbjct: 287 TLSFTTSDG 295


>gi|221110738|ref|XP_002162114.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 207

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 61/191 (31%), Gaps = 10/191 (5%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             S  + + + + D D               +   FSP+ + +A  ++  +    V L+ 
Sbjct: 9   GASSSLDSHIRIWDLDKGKQIKSIDLGPVDSWTVTFSPDSRYIATGSHTGK----VNLIG 64

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  + +       ++  +S +GK        D  ++I+ +  +      L      
Sbjct: 65  VESGIKEETLDTRSKFTMSIAYSPDGKYLA-CGAIDGIINIFDMTSK-KLLHTLEGHAMP 122

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SPDS  ++  SD      L +     ++         +      +SP       
Sbjct: 123 IRSLTFSPDSQILLTASD---DGHLKMYDVQHANLAGTLSGHGSWVVSVDYSPDNKHFV- 178

Query: 364 TKFSGEKFAIG 374
           +  S +   I 
Sbjct: 179 SASSDKSVKIW 189



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 1/80 (1%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +   +   Q +         +   +SP    IA    +G+   IGV +    +E L
Sbjct: 16  SHIRIWDLDKGKQIKSIDLGPVDSWTVTFSPDSRYIATGSHTGKVNLIGV-ESGIKEETL 74

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
                   +  +SP G+ L 
Sbjct: 75  DTRSKFTMSIAYSPDGKYLA 94


>gi|332026028|gb|EGI66179.1| WD repeat-containing protein 51B [Acromyrmex echinatior]
          Length = 382

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 99/252 (39%), Gaps = 12/252 (4%)

Query: 159 SDDIYQSITGEKGDFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
               YQ       D  + + F   ++ ++S  + N++ +         Y   +  + + +
Sbjct: 10  CKPAYQGYFIGHNDAVTALNFHPNADQLISSSMDNTVMLWRLKHLKPAYKFIAHKEAVLD 69

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SPN + +A ++ D    +R+++   +      +     S++ + +FS NG++ + + 
Sbjct: 70  VCYSPNGEVMASSSKD--RSVRIWIPKVKGHSFDFKP--HSSVVRSVQFSPNGEKLV-TA 124

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D+++ ++ +  Q    +  +   +    A +SPD   +V  SD    + + V      
Sbjct: 125 SNDKSIKLW-IPYQKKFLKTFSGHTYWVNCAKFSPDGKLLVSCSD---DKTIKVWDITSG 180

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
              +   + +A      + P G  I  +  +     +  ++ D   +   V    +    
Sbjct: 181 RCVKTFNEIKAPVKYVEFHPSGTTIG-SANTDACVKLYDLRTDSLCQHYAVHTEPVNMIK 239

Query: 397 WSPSGRSLIFSR 408
           + P+G+ ++ + 
Sbjct: 240 FHPNGKFMLTAS 251


>gi|329956939|ref|ZP_08297507.1| hypothetical protein HMPREF9445_02382 [Bacteroides clarus YIT
           12056]
 gi|328523696|gb|EGF50788.1| hypothetical protein HMPREF9445_02382 [Bacteroides clarus YIT
           12056]
          Length = 372

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 79/261 (30%), Gaps = 35/261 (13%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + + ++    +       +    D+   N+R L   R         S N ++V  A Y  
Sbjct: 74  DGKFIYAVSEMNDSTAAVNALAFDKQTGNLRLLNSERTPGAAPCYVSTNGKEVLTANYSG 133

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPR-------------FSSNGKRALISVQKDE 280
            ++    L         + +  F+     P              FS +GK    +    +
Sbjct: 134 GNMSVFRLRKDGTLSPAEAL--FKGTANGPDTIRQIVPHIHCALFSPDGKYIFATDFSAD 191

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA-------SYSPDSSQIVFESDREGKEQLYVMQS 333
            +  +++  +     RL      +I+        ++SP+       ++  GK  +     
Sbjct: 192 RILRFTLSSE-GNISRLP-GEATDITPDSGPRHLTFSPNGKFAYLINELSGK--VIAFGY 247

Query: 334 NGSDQKRIS-----QDKEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKDGSQERLLV 387
                ++I        +     D   SP G  + A  +  G+  AI  +           
Sbjct: 248 TDGKLEQIQSIAADSLQARGSADIHLSPDGKFLYASNRLEGDGIAIFTVDTVNGTLTRAG 307

Query: 388 EDSNLQAPT---WSPSGRSLI 405
                  P     +P+G+ L+
Sbjct: 308 YQPTGIHPRHFNITPNGKYLL 328



 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 85/255 (33%), Gaps = 43/255 (16%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPRF-SSNGKRALISVQ 277
           S + + +   +  ++    V  +   +     + + + R+   AP + S+NGK  L +  
Sbjct: 72  SEDGKFIYAVSEMNDSTAAVNALAFDKQTGNLRLLNSERTPGAAPCYVSTNGKEVLTANY 131

Query: 278 KDEAMDIYSVDLQS--NATERLTNTLFINIS-----------ASYSPDSSQIVFESDREG 324
               M ++ +      +  E L                    A +SPD   I F +D   
Sbjct: 132 SGGNMSVFRLRKDGTLSPAEALFKGTANGPDTIRQIVPHIHCALFSPDGKYI-FATDFSA 190

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPV-------WSPQGDL-----------IAFTKF 366
              L    S+  +  R+    EA+   P        +SP G             IAF   
Sbjct: 191 DRILRFTLSSEGNISRL--PGEATDITPDSGPRHLTFSPNGKFAYLINELSGKVIAFGYT 248

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            G+   I  +  D  Q R     +++     SP G+ L ++  +    G  ++++D    
Sbjct: 249 DGKLEQIQSIAADSLQAR---GSADIHL---SPDGKFL-YASNRLEGDGIAIFTVDTVNG 301

Query: 427 NETLINTPAYASDPQ 441
             T          P+
Sbjct: 302 TLTRAGYQPTGIHPR 316



 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 58/177 (32%), Gaps = 31/177 (17%)

Query: 285 YSVDLQSNATERLTNTLFINISASY---SPDSSQIVFES---DREGKEQLYVMQSNGSDQ 338
           +  + ++     L +    N   SY   S D   I   S   D               + 
Sbjct: 46  FRFNQKTGTATPLGSVELSN--PSYLTPSEDGKFIYAVSEMNDSTAAVNALAFDKQTGNL 103

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS----------------Q 382
           + ++ ++         S  G  +    +SG   ++  ++KDG+                 
Sbjct: 104 RLLNSERTPGAAPCYVSTNGKEVLTANYSGGNMSVFRLRKDGTLSPAEALFKGTANGPDT 163

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            R +V   ++    +SP G+ + F+     D   + +++   G    L   P  A+D
Sbjct: 164 IRQIV--PHIHCALFSPDGKYI-FATDFSADRILR-FTLSSEGNISRL---PGEATD 213


>gi|206969423|ref|ZP_03230377.1| tolB domain protein [Bacillus cereus AH1134]
 gi|206735111|gb|EDZ52279.1| tolB domain protein [Bacillus cereus AH1134]
          Length = 410

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 75/223 (33%), Gaps = 55/223 (24%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           + + +  P++S + + +AY     ++IL +Y +     +  K++  F S     ++S   
Sbjct: 52  KGENITGPKWSHDGEWLAYVKGKKQNILELYRL-----KDGKKVTPFHSEASNYQWSPTE 106

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----SYSPDSSQIVFESDREG 324
                         + + D++        N  F N+SA     ++ PD    +  S+   
Sbjct: 107 NIIAFIFTG----TLNTFDVEKK------NADFENVSAGVGDYAWYPDGKNFLVSSEAHL 156

Query: 325 KEQLYVMQSNGSDQKRISQDKEAS---------------------YFDPVWSPQGDLIAF 363
               +     G+    + +D   +                          WSP    I+F
Sbjct: 157 LPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHDDFLALVASGFKWSPDQKWISF 212

Query: 364 -----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNLQAPT 396
                  +S +   + +++ DGS      + LL       AP+
Sbjct: 213 LAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNAQWFQWAPS 255



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       +        +E+ L +  N+  P WS  G  L + + K      +LY
Sbjct: 30  KVAFIRHHNLWIKVE------GKEKQLTKGENITGPKWSHDGEWLAYVKGKK-QNILELY 82

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 83  RLK-DGKKVTPFHS--EASNYQWSP 104


>gi|302683454|ref|XP_003031408.1| hypothetical protein SCHCODRAFT_257488 [Schizophyllum commune H4-8]
 gi|300105100|gb|EFI96505.1| hypothetical protein SCHCODRAFT_257488 [Schizophyllum commune H4-8]
          Length = 993

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 66/199 (33%), Gaps = 29/199 (14%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED----ILRVYLMDTRI 246
           N+LC++D +   +  L    D    +PRF+ +   + +  +   D       +Y+ D  +
Sbjct: 155 NTLCIIDTNTKTVSPLVSGADFYA-QPRFAADGAHLLWQQWSFPDMSWEGAEIYVADVSV 213

Query: 247 DR-------APKRIGNFRSMILA--PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                      K +      I A  P + SN    L  +      + ++ +L +     +
Sbjct: 214 AEGKAVTVANTKHVAGKPRKISAYYPSWISN-DTILFLLDVSGYYNPWTYNLATQQARPI 272

Query: 298 TNTLFINI----SASYS---------PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
                       + ++          P S+  VF + R+G+  LY++     +   +   
Sbjct: 273 LREPIPEDFGGSAPAWQLGWTFYTVLPGSNHAVFTAMRDGRSVLYLVDLQSGEHTTL-DS 331

Query: 345 KEASYFDPVWSPQGDLIAF 363
                    W P    I F
Sbjct: 332 PYTIVEFMHWVPAEKKIIF 350



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 50/158 (31%), Gaps = 15/158 (9%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR---IGNFRSMILAPRF- 265
           R    + P +  N   +             Y + T+  R   R     +F     AP + 
Sbjct: 232 RKISAYYPSWISNDTILFLLDVSGYYNPWTYNLATQQARPILREPIPEDFGG--SAPAWQ 289

Query: 266 --------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                         A+ +  +D    +Y VDLQS     L +   I     + P   +I+
Sbjct: 290 LGWTFYTVLPGSNHAVFTAMRDGRSVLYLVDLQSGEHTTLDSPYTIVEFMHWVPAEKKII 349

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           F+      +    +  + +    +S+ K +    P  S
Sbjct: 350 FQGSVP-NDNFKTVWLSVTPASPLSKSKYSFEVVPDKS 386


>gi|281210246|gb|EFA84413.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 495

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 89/256 (34%), Gaps = 53/256 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S + +K+A  +   + +++V+ +D    +    +      I   ++S      L +  
Sbjct: 206 AWSCDGKKLA--SGGMDHLVKVWTLDAHKSKDSMELRGHTDTIEQLKWSPVAPDVLATAS 263

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + I+  D ++     + NT   NI+  +SPD + I   +  +    + + ++    
Sbjct: 264 SDKTVRIW--DAKTGKCTTIINTPGENINLGWSPDGTLIAIGNKEDNVSIIDLKRAEEPI 321

Query: 338 QK---------RISQDKEASYFDP----------VWSPQ-GDLIAFTKFSGEKFAIGVMK 377
            +          IS D +   F             W P           +     +  ++
Sbjct: 322 VRTYKYQHEINEISWDNKGELFFLTTGTGILEVMAWMPDQKKYNPLKSINAHTSNLYTIE 381

Query: 378 KD--------GSQERLLV-----------EDSNLQAP----TWSPSGRSLIFSRKK---- 410
            D        G+ + ++              + L  P    ++S  G+ L +S +     
Sbjct: 382 IDPLGRYFAIGAADSVITLWDIEEMFCVRSFTRLNQPVRATSFSSDGQFLAYSSEDPIIE 441

Query: 411 --DGDTGSKLYSIDLN 424
               +TG  +Y ++L+
Sbjct: 442 IGHVETGQAVYQVNLD 457



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 53/168 (31%), Gaps = 26/168 (15%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTLFINISASYSPDS 313
             +  + +  +S +GK+   S   D  + ++++D  +S  +  L           +SP +
Sbjct: 197 GHKKKVNSVAWSCDGKKLA-SGGMDHLVKVWTLDAHKSKDSMELRGHTDTIEQLKWSPVA 255

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             ++  +  +   +++   +       I  +      +  WSP G LIA          I
Sbjct: 256 PDVLATASSDKTVRIW--DAKTGKCTTII-NTPGENINLGWSPDGTLIAIGNKEDNVSII 312

Query: 374 GVMKKDGSQER---------------------LLVEDSNLQAPTWSPS 400
            + + +    R                     L      L+   W P 
Sbjct: 313 DLKRAEEPIVRTYKYQHEINEISWDNKGELFFLTTGTGILEVMAWMPD 360



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 7/126 (5%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++S D  ++      +   +++ + ++ S      +    +     WSP    +  T  S
Sbjct: 206 AWSCDGKKLA-SGGMDHLVKVWTLDAHKSKDSMELRGHTDTIEQLKWSPVAPDVLATASS 264

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            +   I   K  G    ++          WSP G  +       G+    +  IDL    
Sbjct: 265 DKTVRIWDAKT-GKCTTIINTPGENINLGWSPDGTLIAI-----GNKEDNVSIIDLKRAE 318

Query: 428 ETLINT 433
           E ++ T
Sbjct: 319 EPIVRT 324


>gi|242806969|ref|XP_002484854.1| chromosome segregation protein (SepB), putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218715479|gb|EED14901.1| chromosome segregation protein (SepB), putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 841

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 76/233 (32%), Gaps = 18/233 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    ++   D +   +  L       + +   S + Q +A A+    D L V +++   
Sbjct: 73  GAEDGTVWRYDLESGKMDKLLVRCALPVRDLAISSDGQWIAVAS----DELTVKVVNVDD 128

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               K +           F  +G+   +S   D  + IYS+        R  +     + 
Sbjct: 129 MTNVKYLREQTKGSKHISFDPSGRFIAVSCT-DGVLYIYSIASDEPELVRKIDGAIRRLE 187

Query: 307 AS--------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                     + PD +   F + +  +E      S+ S QK  S           WSP G
Sbjct: 188 PEDEATSRVVWHPDGT--AFATAQASREVAIFSTSDWSPQKSFSSVHNGDITALGWSPNG 245

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            L+A     G    I + +          + +N+   +W PS   L F+    
Sbjct: 246 ALLATAAADG---KILLWETSTQNILKRYDFANVINLSWHPSINLLCFTTSDG 295



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 68/209 (32%), Gaps = 31/209 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--KRIGNFRSMILAPRFSSNGKRALIS 275
            ++PN + +   T      +R+Y +    +     + +     +              I 
Sbjct: 22  TYTPNGKHII--TAGSNSAIRIYTVGDEGEPRTIDEGVEAHFGITAT-------DNCFII 72

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSN 334
             +D  +  Y  DL+S   ++L     + +   + S D   I   SD     +L V   N
Sbjct: 73  GAEDGTVWRY--DLESGKMDKLLVRCALPVRDLAISSDGQWIAVASD-----ELTVKVVN 125

Query: 335 GSDQKRISQDKEASYFDPVWS--PQGDLIAFTKFSGEKFAIGVM--------KKDGSQER 384
             D   +   +E +      S  P G  IA +   G  +   +         K DG+  R
Sbjct: 126 VDDMTNVKYLREQTKGSKHISFDPSGRFIAVSCTDGVLYIYSIASDEPELVRKIDGAIRR 185

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           L  ED       W P G    F+  +   
Sbjct: 186 LEPEDEATSRVVWHPDGT--AFATAQASR 212


>gi|124007657|ref|ZP_01692361.1| outer membrane protein OmpA family, putative [Microscilla marina
           ATCC 23134]
 gi|123986955|gb|EAY26720.1| outer membrane protein OmpA family, putative [Microscilla marina
           ATCC 23134]
          Length = 632

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 71/246 (28%), Gaps = 68/246 (27%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMI----- 260
             ++    + P  S + + + + + ++   I  +Y    + +    +  + +S+      
Sbjct: 49  LNTKKYTEYAPSLSADGKIMVFQSDNNRYRIWYLYEARLQTNGKWSKPRSIKSINHFGQK 108

Query: 261 ------------LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                        AP  S +G            +                          
Sbjct: 109 PSVGNGFQTDFIAAPCLSPDGNTLYFCATFAGNL-------------------------- 142

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                 + ++ S R G    +    N         +  AS   P  SP+GD + F + +G
Sbjct: 143 ----GKRDLYVSYR-GTNGEWGKPINVGAPV----NTNASEDFPSISPEGDALYFARPNG 193

Query: 369 EK------FAIGVM--KKDGSQERLL------VEDSNLQAPTWSPSGRSLIFSR-KKDGD 413
           +K      + + V          +        +     + P     G +L++S   + G 
Sbjct: 194 KKRQQKTCYDLWVSLKNPQTGNWKKPEKLPKSINTGCEKCPRIQADGVTLVYSSVHEGGT 253

Query: 414 TGSKLY 419
           TG  LY
Sbjct: 254 TGFDLY 259



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 36/161 (22%)

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLY------------------VMQSNGS 336
           + L    +   + S S D   +VF+SD   + +++                  +   N  
Sbjct: 47  KNLNTKKYTEYAPSLSADGKIMVFQSDNN-RYRIWYLYEARLQTNGKWSKPRSIKSINHF 105

Query: 337 DQKRISQDKEASYF--DPVWSPQGDLIAF-TKFSG--EKFAIGVMKKDGSQER------- 384
            QK    +   + F   P  SP G+ + F   F+G   K  + V  +  + E        
Sbjct: 106 GQKPSVGNGFQTDFIAAPCLSPDGNTLYFCATFAGNLGKRDLYVSYRGTNGEWGKPINVG 165

Query: 385 -LLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYS 420
             +  +++   P+ SP G +L F+R    K+   T   L+ 
Sbjct: 166 APVNTNASEDFPSISPEGDALYFARPNGKKRQQKTCYDLWV 206



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 60/215 (27%), Gaps = 32/215 (14%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-----YDDEDI 236
           ++        S+  ++  G         +   +  P  SP+   + +           D+
Sbjct: 88  QTNGKWSKPRSIKSINHFGQKPSVGNGFQTDFIAAPCLSPDGNTLYFCATFAGNLGKRDL 147

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRALISVQKDE--------AMDIY 285
              Y         P  +G   +   +   P  S  G     +    +         + + 
Sbjct: 148 YVSYRGTNGEWGKPINVGAPVNTNASEDFPSISPEGDALYFARPNGKKRQQKTCYDLWVS 207

Query: 286 SVDLQSNATERLTNTL-FINIS----ASYSPDSSQIVFESDREGKEQLY-----VMQSNG 335
             + Q+   ++       IN           D   +V+ S  EG    +     V+    
Sbjct: 208 LKNPQTGNWKKPEKLPKSINTGCEKCPRIQADGVTLVYSSVHEGGTTGFDLYKAVLNVKQ 267

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +D ++I +  E +      SP  D        G+ 
Sbjct: 268 TDWEQIGEISELN------SPDFDQFVTVTGEGKG 296


>gi|319652935|ref|ZP_08007040.1| hypothetical protein HMPREF1013_03655 [Bacillus sp. 2_A_57_CT2]
 gi|317395284|gb|EFV76017.1| hypothetical protein HMPREF1013_03655 [Bacillus sp. 2_A_57_CT2]
          Length = 414

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 81/260 (31%), Gaps = 50/260 (19%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-----DDEDI 236
           E+ V      +  +  + G     +T    +    P++S + Q + Y          E  
Sbjct: 25  ENNVQAAFIRNGYLWLKTGNIEEQITADPAKFNHTPKWSYDGQWLLYEKEAKELPSIEKS 84

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             +++ + +  +  K      +     +++ +  +   +        +   DL       
Sbjct: 85  TEIWVYNVKAKKHIKIFQGGGNA----KWAPSDNKIAFTS----NSVLNISDL--KEFHN 134

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYV---------------MQSNGSDQKRI 341
           +T  L ++   ++ PD    +  S    +   +                +      +   
Sbjct: 135 VT--LGVDDF-NWYPDGKGFIVSSSAVLRPDGWTSPILYKVQLPNDLEKLNLTDYVEPLF 191

Query: 342 SQDKE----------ASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLL 386
           +  KE           +     +SP G  I+F       ++     + V+  +G    +L
Sbjct: 192 TIPKEIGNGKASIMSINATTFKFSPDGKWISFIVNPTASWSMDSDMVCVISANGKNFEVL 251

Query: 387 VEDSNL-QAPTWSPSGRSLI 405
            E       P W+P GR+L+
Sbjct: 252 DEMILHLDVPKWAP-GRNLL 270



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 88/243 (36%), Gaps = 35/243 (14%)

Query: 221 PNQ--QKVAYATYDDEDILRVYLMDT--RIDRAPKRIGNFRSMILA-----PRFSSNGKR 271
           P+     + Y      D+ ++ L D    +   PK IGN ++ I++      +FS +GK 
Sbjct: 161 PDGWTSPILYKVQLPNDLEKLNLTDYVEPLFTIPKEIGNGKASIMSINATTFKFSPDGKW 220

Query: 272 ALISVQKD-----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-- 324
               V        ++  +  +       E L   +       ++P  + + + +      
Sbjct: 221 ISFIVNPTASWSMDSDMVCVISANGKNFEVLDEMILHLDVPKWAPGRNLLGYIAGGGRIV 280

Query: 325 ----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-------- 372
                ++L V +        ++  K A      W     L+A ++    +++        
Sbjct: 281 MGFKNKKLKVTELPAFKTMNLTPAKSAEMGF-TWVDNERLVA-SRVDESEWSNDPQRRPE 338

Query: 373 --IGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             + +++ + +Q+  +    +      P +    R LI+ RKK       L+  DLNG+N
Sbjct: 339 PTLCLIQLNKTQQTRITYPKKTIGDYEPLYIKDARKLIWVRKKLAQQKGDLWIADLNGKN 398

Query: 428 ETL 430
             +
Sbjct: 399 AKV 401



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 17/114 (14%)

Query: 306 SASYSPDSS---QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           SA++        Q  F   R G    Y+    G+ +++I+ D       P WS  G  + 
Sbjct: 17  SAAWGDTGENNVQAAFI--RNG----YLWLKTGNIEEQITADPAKFNHTPKWSYDGQWLL 70

Query: 363 FTKFSGE------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           + K + E         I V      +   + +        W+PS   + F+   
Sbjct: 71  YEKEAKELPSIEKSTEIWVYNVKAKKHIKIFQGGGNAK--WAPSDNKIAFTSNS 122


>gi|167517451|ref|XP_001743066.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778165|gb|EDQ91780.1| predicted protein [Monosiga brevicollis MX1]
          Length = 369

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 82/241 (34%), Gaps = 15/241 (6%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               ++ V   +   + +        +F   F+ +  K+  +  D      V + D    
Sbjct: 69  SKDKTIKVYKANTGQLVHTLRGHGGEVFSIAFTADGGKLISSGADA----NVIVWDVERA 124

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              K++      I A   S  G+R + S  +D  + I++ +                   
Sbjct: 125 TIVKKLVGHSGSIFAIAASPAGRRLIASGGEDTVLKIWNAN-TGKLMRSYGGHSDAITGV 183

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SP  S +V    R+G   ++ ++ +   +   +     ++        G  +  T  +
Sbjct: 184 AFSPLDSHLVVSGGRDGVVHIWHVEHSSMMKIVTTHADAITHLAFD---HGGWLLATASA 240

Query: 368 GEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                +  +  D S+ R      S + A  +SP+ + L+ S   D          D+ GR
Sbjct: 241 DATIKVWHVD-DCSEARTFSGHKSTVSACCFSPT-QHLLLSSSWDESFKYW----DVTGR 294

Query: 427 N 427
           +
Sbjct: 295 H 295


>gi|169776413|ref|XP_001822673.1| periodic tryptophan protein 2 [Aspergillus oryzae RIB40]
 gi|238503097|ref|XP_002382782.1| small nucleolar ribonucleoprotein complex subunit (Pwp2), putative
           [Aspergillus flavus NRRL3357]
 gi|83771408|dbj|BAE61540.1| unnamed protein product [Aspergillus oryzae]
 gi|220691592|gb|EED47940.1| small nucleolar ribonucleoprotein complex subunit (Pwp2), putative
           [Aspergillus flavus NRRL3357]
          Length = 901

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 65/192 (33%), Gaps = 12/192 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ QK+   + D +    V + D +            S + A +F+  G   L +   
Sbjct: 346 YSPDGQKIVTTSDDGK----VKVWDVKSGFCVVTFTEHSSAVTACQFAKKG-SVLFTASL 400

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++       T    ++ S S + D S  V  +       +++        
Sbjct: 401 DGSVRAWDL-IRYRNFRTFTAPSRLSFS-SLAVDPSGEVVCAGSPDSFDIHIWSVQTGQL 458

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLLVEDSNLQAPT 396
                  E       ++  G+ +    +      I  +  +   S+   LV D    +  
Sbjct: 459 LDQLTGHEGPVSALAFAADGNHLVSGSWD-RTVRIWSIFGRTQTSEPLQLVSDVL--SVA 515

Query: 397 WSPSGRSLIFSR 408
           + P G+ +  S 
Sbjct: 516 FRPDGKQVAASS 527



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 88/232 (37%), Gaps = 18/232 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N+ +L       +     + + + +A+ +     +L V+   +      K+ G+  SM 
Sbjct: 285 FNMIHLLSVSQSNIDYVTVNKSGEWLAFGSSKHGQLL-VWEWQSE-SYILKQQGHLESM- 341

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
            +  +S +G++ + +   D  + ++  D++S       T       +  ++   S ++F 
Sbjct: 342 GSLVYSPDGQKIV-TTSDDGKVKVW--DVKSGFCVVTFTEHSSAVTACQFAKKGS-VLFT 397

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +  +G  + + +     + +  +     S+      P G+       S + F I +    
Sbjct: 398 ASLDGSVRAWDL-IRYRNFRTFTAPSRLSFSSLAVDPSGE--VVCAGSPDSFDIHIWSVQ 454

Query: 380 GSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             Q   +L   +  + A  ++  G  L+       D   +++SI   GR +T
Sbjct: 455 TGQLLDQLTGHEGPVSALAFAADGNHLV---SGSWDRTVRIWSIF--GRTQT 501


>gi|320101643|ref|YP_004177234.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Isosphaera pallida ATCC 43644]
 gi|319748925|gb|ADV60685.1| peptidase S9B dipeptidylpeptidase IV domain protein [Isosphaera
           pallida ATCC 43644]
          Length = 821

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 25/114 (21%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           +  G R LI +Q D  +            +RLTNT    +   +SP   ++ F  D    
Sbjct: 175 APEGHRLLIPLQGDLYLQE-----GDGPLQRLTNTESPELDPQWSPRGDRVAFVRD---- 225

Query: 326 EQLYVMQSNGSDQKRISQDKE----------------ASYFDPVWSPQGDLIAF 363
            +L V+      +  ++   E                       WSPQG  +A+
Sbjct: 226 GELVVLDLTTRRETALTAGAEEGMVHGLAEFIAQEELGRSSGFWWSPQGSKLAY 279



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 39/171 (22%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            L+  L     D   +R+ N  S  L P++S  G R      +D   ++  +DL +    
Sbjct: 184 PLQGDLYLQEGDGPLQRLTNTESPELDPQWSPRGDRVAFV--RDG--ELVVLDLTTRRET 239

Query: 296 RLTNTL-----------------FINISASYSPDSSQIVF--ESDREGKEQLYVMQ-SNG 335
            LT                      +    +SP  S++ +    +R       V   ++ 
Sbjct: 240 ALTAGAEEGMVHGLAEFIAQEELGRSSGFWWSPQGSKLAYQITDERHIPPLTIVYPAADE 299

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           SD +R+   +                 F   +  + A+ V+  +G   R L
Sbjct: 300 SDPRRLETHRYP---------------FAGEANARVALAVVPVNGGPARRL 335



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 10/82 (12%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           +P+G  +        +  + + + DG  +RL   +S    P WSP G  + F R      
Sbjct: 175 APEGHRLLI----PLQGDLYLQEGDGPLQRLTNTESPELDPQWSPRGDRVAFVRD----- 225

Query: 415 GSKLYSIDLNGRNETLINTPAY 436
             +L  +DL  R ET +   A 
Sbjct: 226 -GELVVLDLTTRRETALTAGAE 246



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 50/170 (29%), Gaps = 38/170 (22%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + + DG   R    + +    +P++SP   +VA+      D   V L  T     
Sbjct: 186 QGDLYLQEGDGPLQR--LTNTESPELDPQWSPRGDRVAFV----RDGELVVLDLTTRRET 239

Query: 250 PKRIGNFRSMILAPR---------------FSSNGKRALISVQKDEAMDIYSV---DLQS 291
               G    M+                   +S  G +    +  +  +   ++       
Sbjct: 240 ALTAGAEEGMVHGLAEFIAQEELGRSSGFWWSPQGSKLAYQITDERHIPPLTIVYPAADE 299

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           +   RL    +               F  +   +  L V+  NG   +R+
Sbjct: 300 SDPRRLETHRYP--------------FAGEANARVALAVVPVNGGPARRL 335


>gi|228999143|ref|ZP_04158725.1| TolB domain protein [Bacillus mycoides Rock3-17]
 gi|228760760|gb|EEM09724.1| TolB domain protein [Bacillus mycoides Rock3-17]
          Length = 394

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 88/237 (37%), Gaps = 45/237 (18%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG N + +T    + + +P++S + + +AYA  ++++ L +Y +  R   
Sbjct: 17  RNHNLWI-KIDG-NEKQITKG--EYITKPKWSHDGKWIAYAKGEEQNQLELYCVADR--- 69

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINIS 306
             K+I   ++     ++S            +    + + D +        +++ +     
Sbjct: 70  --KKIVPSQTEATNYQWSPAENIIAF----EFTSTLNTFDAEKKNATFENVSSGVGDY-- 121

Query: 307 ASYSPDSSQIVFESD-------REGKEQLYVMQSNGSDQKRISQDK----------EASY 349
            ++ PD  + +  S+         G +   V +  G +  ++                  
Sbjct: 122 -AWYPDGKKFLVSSEAQLLPTGWTGAQLYEVQKDAGMNPNKMKHLYTLPSMQEDFLAYIA 180

Query: 350 FDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNLQAPT 396
            D  WSP    IAF       +S +   + ++K DGS      + LL       AP+
Sbjct: 181 SDFKWSPNQKWIAFLAVPTASWSADSNTLCLLKADGSYFEKVDQMLLNSQWIQWAPS 237



 Score = 43.9 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 38/84 (45%), Gaps = 10/84 (11%)

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +AF +       + + K DG  E+ + +   +  P WS  G+ + +++ ++     +LY 
Sbjct: 13  VAFIR----NHNLWI-KIDG-NEKQITKGEYITKPKWSHDGKWIAYAKGEE-QNQLELYC 65

Query: 421 IDLNGRNETLINTPAYASDPQWVG 444
           +      + ++ +   A++ QW  
Sbjct: 66  V---ADRKKIVPSQTEATNYQWSP 86


>gi|149921734|ref|ZP_01910181.1| WD-40 repeat [Plesiocystis pacifica SIR-1]
 gi|149817385|gb|EDM76858.1| WD-40 repeat [Plesiocystis pacifica SIR-1]
          Length = 1023

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 60/194 (30%), Gaps = 11/194 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
              + + ++ +  FS + + +     D+   +     D          G     I A   
Sbjct: 369 TLRAHEGMVTDIDFSADGRWMISCGEDNRPRIWDLHQDNPTTPTGVLDGGHEGAITAVDI 428

Query: 266 SSNGKRALISVQKDEAMDIY-SVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DRE 323
           +++G  A  +   D    I+  VD +      L+      +  + SP+   ++  S DR 
Sbjct: 429 AADG-SAAYTASDDMTARIWGLVDGKPKGRRTLSGHESPVMDVAVSPNGKWLITGSQDRT 487

Query: 324 GKEQLYVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +    + + +     R   I    +        SP    +A T  + +   I  ++   
Sbjct: 488 AR----LWKLDSGAPHRNPVILTGHKGPVTHVAISPD-SSLAVTASTDKSLKIWELEAKD 542

Query: 381 SQERLLVEDSNLQA 394
                +    +   
Sbjct: 543 PAVTGVTFTGHEDV 556



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 87/268 (32%), Gaps = 32/268 (11%)

Query: 192 SLCVMDRDGANIRY-LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            L  + +D  N    +       + E  FS + + +  A+ D      V           
Sbjct: 715 RLWDVTKDDPNEFVKVLDGHQGEVLELAFSSDGEWLFSASTDK----TVRAWKASEGWKS 770

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS---NATER-LTNTLFINIS 306
             +      ++A   + N +  + +   D    +   DL+S      ++ L       I 
Sbjct: 771 TELAGHVDEVIAMALTPNDRFLVTT---DLKGQLRVWDLKSPPLGQPKQALDAHKGSAIW 827

Query: 307 A-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAF 363
           A + SPD   ++  SD +   +L+ + ++G D+K ++  +  +       +S  G     
Sbjct: 828 ALAISPDGKHMLSGSD-DRVAKLWSVTADGLDKK-VTALRGHTDTVKAATFSADGKWAVT 885

Query: 364 TKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-----------SLIFSRKK 410
               G    + +     D   E   +  S ++   +SP  +            + F R  
Sbjct: 886 GSRDGTLRLWPLEEEHPDEKAEVFEMAGSAVEWVMFSPDSKRLYNGNDDGSVHVWFPRPL 945

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +G    ++     +G+       P    
Sbjct: 946 EGRDNHQVLV--GHGKKVAAATMPVDGR 971



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 90/275 (32%), Gaps = 24/275 (8%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLM 242
           VSG    +  V D  G        +  +    P    S  +    + T   +    ++  
Sbjct: 615 VSGSADGTAFVWDFQGGEQANAGSAVARAHTGPVNAVSAVRDGKLFVTGSGDHSAWLWRF 674

Query: 243 DTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTN 299
           +      PK  +   +  + A   S +G  A  + Q D+A+ ++ V         + L  
Sbjct: 675 EPSGRPEPKAHLVGHQGPVNAAVLSPDGHWAATAGQ-DQAVRLWDVTKDDPNEFVKVLDG 733

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                +  ++S D   + F +  +   + +         +      E        +P   
Sbjct: 734 HQGEVLELAFSSDGEWL-FSASTDKTVRAWKASEGWKSTELAGHVDE--VIAMALTPNDR 790

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            +  T   G+     +      Q +  ++    S + A   SP G+ ++       D  +
Sbjct: 791 FLVTTDLKGQLRVWDLKSPPLGQPKQALDAHKGSAIWALAISPDGKHMLSGSD---DRVA 847

Query: 417 KLYSIDLNGRNETLINTPA---------YASDPQW 442
           KL+S+  +G ++ +              +++D +W
Sbjct: 848 KLWSVTADGLDKKVTALRGHTDTVKAATFSADGKW 882



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 66/215 (30%), Gaps = 31/215 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +     +D  I    L         K +     M+    FS++G+   IS  +D
Sbjct: 338 SPDGKWLV-TAAEDRTIRLWNLQAIDPSTDTKTLRAHEGMVTDIDFSADGRWM-ISCGED 395

Query: 280 EAMDIYSVD----------LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
               I+ +           L       +T    ++I+A    D S   + +  +   +++
Sbjct: 396 NRPRIWDLHQDNPTTPTGVLDGGHEGAIT---AVDIAA----DGS-AAYTASDDMTARIW 447

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS----QERL 385
            +       +R     E+   D   SP G  +             + K D         +
Sbjct: 448 GLVDGKPKGRRTLSGHESPVMDVAVSPNGKWLITGSQDRTA---RLWKLDSGAPHRNPVI 504

Query: 386 LV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           L      +     SP     + +     D   K++
Sbjct: 505 LTGHKGPVTHVAISPDSSLAVTAST---DKSLKIW 536


>gi|296163157|ref|ZP_06845926.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
 gi|295886584|gb|EFG66433.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
          Length = 845

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 44/332 (13%), Positives = 101/332 (30%), Gaps = 41/332 (12%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAH-TISDDIYQS--ITGEKGDFNSRILFVSESVVSGIIK 190
               +I+G  +  +       A        Y     T   G F       S ++ +  + 
Sbjct: 509 YTNNRILGYTYNHTTGDVGAAAGGIFPAGTYPRWVTTNPAGTFLYAANNNSNNISAYTVD 568

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +   + +   +      S + ++  P        + +    +   + VY ++ +I  A 
Sbjct: 569 ATTGALTQVAGSPFASGTSPNGMVVNPA-----GTLLFVVNSNGPSVSVYSIN-QISGAL 622

Query: 251 KRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
             +G+   +  AP     + NG+   +  Q    +  ++VD  +     ++   F +  A
Sbjct: 623 TPVGSPYIVGSAPTRLAITPNGQFLYVLNQNSHDISGFAVDSTTGVLTPISGGPFSDTGA 682

Query: 308 --------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--------SQDKEASYFD 351
                   + +P  + +++  + E       + +       +        +      +  
Sbjct: 683 VNQGGYGITVNPAGT-VLYVVNWEANITALAIDATSGALTPVSGSPFTATTNYTGWGWQS 741

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS---------NLQAPTWSPSGR 402
              SP G L+  +  +G       +         L  DS         N   P   P+G+
Sbjct: 742 ASLSPDGKLLFASTGNGGNLLTYSVDATTGALTQLTSDSYGAYGNAGTNFTVPD--PTGK 799

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            L +        GS +      G  + L  +P
Sbjct: 800 YL-YVSNALAIYGSVVSIDPATGALQDLAGSP 830


>gi|148240469|ref|YP_001225856.1| hypothetical protein SynWH7803_2133 [Synechococcus sp. WH 7803]
 gi|147849008|emb|CAK24559.1| Conserved hypothetical protein similar to TolB C-terminal domain
           [Synechococcus sp. WH 7803]
          Length = 163

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 51/133 (38%), Gaps = 11/133 (8%)

Query: 257 RSMILAPRFSSNGKR--------ALISVQKDEAMDIYSVDLQSNATERLT---NTLFINI 305
             +  A R S++ +R         +    ++    I  VDL++     L          +
Sbjct: 30  PGLNSALRRSADSRRQPALGQQWLVSIASRNGRERIELVDLRTRQPVPLPGLNQAGSQPV 89

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           SAS S +  +I F   REG+ +L + + +    +R+  +      +     +G  +A   
Sbjct: 90  SASVSGNGKRIAFIRTREGRTELMLYRRDAGALQRLPVEPSGVPREVSLDGEGRRLAVQV 149

Query: 366 FSGEKFAIGVMKK 378
               ++ + V++ 
Sbjct: 150 SREGRWDVDVIRL 162



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 3/114 (2%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALISVQKDE 280
            Q+   +        R+ L+D R  +     G     S  ++   S NGKR      ++ 
Sbjct: 49  GQQWLVSIASRNGRERIELVDLRTRQPVPLPGLNQAGSQPVSASVSGNGKRIAFIRTREG 108

Query: 281 AMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             ++      + A +RL      +    S   +  ++  +  REG+  + V++ 
Sbjct: 109 RTELMLYRRDAGALQRLPVEPSGVPREVSLDGEGRRLAVQVSREGRWDVDVIRL 162



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 5/84 (5%)

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             +        +  I ++     Q   L       S   + + S +G+ + F R ++G T
Sbjct: 51  QWLVSIASRNGRERIELVDLRTRQPVPLPGLNQAGSQPVSASVSGNGKRIAFIRTREGRT 110

Query: 415 GSKLYSIDLNGRNETLINTPAYAS 438
              LY  D  G  + L   P+   
Sbjct: 111 ELMLYRRDA-GALQRLPVEPSGVP 133


>gi|268563847|ref|XP_002647027.1| Hypothetical protein CBG03541 [Caenorhabditis briggsae]
 gi|187036437|emb|CAP24418.1| hypothetical protein CBG_03541 [Caenorhabditis briggsae AF16]
          Length = 1201

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 55/164 (33%), Gaps = 23/164 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------------RIGNFRSMILAPR 264
           R+SP+  + A+ + D    +  Y+       +                +   R  +LA  
Sbjct: 356 RWSPDGNRFAFGSDDSSVSVWEYVGRINSLGSITGGAQNVERYKECCVLRGHRMEVLAVE 415

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S NGK    S   D  + +Y+     +    LT+        S+ P    +      EG
Sbjct: 416 WSPNGKYLA-SGSLDHRIIVYNARKLPDQIAVLTDCQMPVKGLSWDPIGKYLA---SLEG 471

Query: 325 KEQLYVMQSNGSD-QKRISQDKEAS-----YFDPVWSPQGDLIA 362
            ++L    ++       +++  E S          WSP G  + 
Sbjct: 472 DKKLRFWATDSWQCVTSVTEPFEGSKEETVLSRMDWSPDGKYLM 515



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 48/139 (34%), Gaps = 33/139 (23%)

Query: 306 SASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFDPV------ 353
           S  +SPD ++  F SD       E   ++  + S     + + + KE             
Sbjct: 354 SCRWSPDGNRFAFGSDDSSVSVWEYVGRINSLGSITGGAQNVERYKECCVLRGHRMEVLA 413

Query: 354 --WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAP----TWSPSGRS 403
             WSP G  +A          I V        R L +     ++ Q P    +W P G+ 
Sbjct: 414 VEWSPNGKYLASGSLD---HRIIVYNA-----RKLPDQIAVLTDCQMPVKGLSWDPIGKY 465

Query: 404 LIFSRKKDGDTGSKLYSID 422
           L      +GD   + ++ D
Sbjct: 466 LA---SLEGDKKLRFWATD 481



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 59/182 (32%), Gaps = 33/182 (18%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSV--------DLQSN--ATER------LTNTLFINISA 307
           R+S +G R       D ++ ++           +       ER      L       ++ 
Sbjct: 356 RWSPDGNRFAF-GSDDSSVSVWEYVGRINSLGSITGGAQNVERYKECCVLRGHRMEVLAV 414

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +SP+   +   S      ++ V  +    DQ  +  D +       W P G  +A    
Sbjct: 415 EWSPNGKYLASGSL---DHRIIVYNARKLPDQIAVLTDCQMPVKGLSWDPIGKYLA--SL 469

Query: 367 SGEKFAIGVMKKDG----SQERLLVEDSNLQAP----TWSPSGRSLIF-SRKKDGDTGSK 417
            G+K  +     D     +      E S  +       WSP G+ L+  +  +DG    K
Sbjct: 470 EGDK-KLRFWATDSWQCVTSVTEPFEGSKEETVLSRMDWSPDGKYLMTPAAVRDGQPLVK 528

Query: 418 LY 419
           L 
Sbjct: 529 LV 530


>gi|297794173|ref|XP_002864971.1| hypothetical protein ARALYDRAFT_358770 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310806|gb|EFH41230.1| hypothetical protein ARALYDRAFT_358770 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 425

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 78/208 (37%), Gaps = 17/208 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAP 263
                    +   +FS + + +A A+ D    +R Y +D    D   K +  F       
Sbjct: 17  QTLNFHSHAVSSVKFSTDGRLLASASGD--KTIRTYAIDIAQEDSIAKPVHEFSGHDNGV 74

Query: 264 ---RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
               FSS+ +    S   D+ + ++  D+++ +  + L         A+++P S+ IV  
Sbjct: 75  SDIAFSSDARFLA-SASDDKTLKLW--DVETGSVIKTLIGHSNYVFCANFNPQSNMIVSG 131

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         ++            ++  G LI  + + G    I      
Sbjct: 132 SF---DETVRIWDVKSGKCLKVLPAHSVPVTCVDFNRDGSLIVSSSYDG-LCRIW-DSGT 186

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLI 405
           G   + L++D N  +    +SP+G+ ++
Sbjct: 187 GHCVKTLIDDENPPVSFVKFSPNGKFIL 214


>gi|260782442|ref|XP_002586296.1| hypothetical protein BRAFLDRAFT_123279 [Branchiostoma floridae]
 gi|229271397|gb|EEN42307.1| hypothetical protein BRAFLDRAFT_123279 [Branchiostoma floridae]
          Length = 1689

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 64/175 (36%), Gaps = 7/175 (4%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            + ++ T  ++  +R++ M  R     + +      ++A  FS +G    + ++  +   
Sbjct: 629 SEPSFLTSGEDHTVRIWSMKDRSPVLRREV--HDGTVMAAAFSPDGSHIALGMKDGKIEI 686

Query: 284 IYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           +Y  D+        ++TL   I    YSPD   +   S  +G+  ++    N    ++  
Sbjct: 687 LYKRDMSQKTVHVTSDTLGQAICDVKYSPDGRYLAAASH-DGRVSVFDPTQNYDSVRQF- 744

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                      WS     +      GE+ AI  M  +G       + S +   TW
Sbjct: 745 PAGSYPVIHIDWSTDSRFLQTNDEQGER-AIYKM-PEGKMATKRDDLSAIVWETW 797



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 59/185 (31%), Gaps = 6/185 (3%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           S      +    G    R L V  S  S       +++ +      +        D  + 
Sbjct: 605 SPRTVHELVQGHGAGELRALAVHPSEPSFLTSGEDHTVRIWSMKDRSPVLRREVHDGTVM 664

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              FSP+   +A     D  I  +Y  D                I   ++S +G+    +
Sbjct: 665 AAAFSPDGSHIA-LGMKDGKIEILYKRDMSQKTVHVTSDTLGQAICDVKYSPDGRYLA-A 722

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D  + ++      ++  +     +  I   +S D S+ +  +D +G+  +Y M    
Sbjct: 723 ASHDGRVSVFDPTQNYDSVRQFPAGSYPVIHIDWSTD-SRFLQTNDEQGERAIYKMPEGK 781

Query: 336 SDQKR 340
              KR
Sbjct: 782 MATKR 786



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 50/165 (30%), Gaps = 29/165 (17%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-------------NATERLTNTLFINISASYS 310
            FS + K  L+    +E +++   + +S                  L          S+ 
Sbjct: 578 AFSPSAKTILVGTTTNELLEVDISEPESPRTVHELVQGHGAGELRALAVHPS---EPSF- 633

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
                    S  +   +++ M+      +R  +  + +     +SP G  IA     G+ 
Sbjct: 634 -------LTSGEDHTVRIWSMKDRSPVLRR--EVHDGTVMAAAFSPDGSHIALGMKDGKI 684

Query: 371 FAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGD 413
             +           +  +     +    +SP GR L  +   DG 
Sbjct: 685 EILYKRDMSQKTVHVTSDTLGQAICDVKYSPDGRYLA-AASHDGR 728


>gi|91218482|ref|ZP_01255422.1| dipeptidyl aminopeptidase IV [Psychroflexus torquis ATCC 700755]
 gi|91183363|gb|EAS69766.1| dipeptidyl aminopeptidase IV [Psychroflexus torquis ATCC 700755]
          Length = 729

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 46/141 (32%), Gaps = 23/141 (16%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G       ++      Y  DL S +  ++        S ++SP   ++ +         +
Sbjct: 111 GTEVESIFRRSSQGIYYVYDLSSKSLSKI--DEGKIQSPTFSPKGGKVAYVK----NNNI 164

Query: 329 YVMQSNGSDQKRISQDK-----------------EASYFDPVWSPQGDLIAFTKFSGEKF 371
           Y    +  +  +I+ D                   A      WSP G+ +AF +F   + 
Sbjct: 165 YSYFISTGETTQITSDGKKNEVINGVTDWVYEEEFAFVRAFEWSPNGNQMAFLRFDESEV 224

Query: 372 AIGVMKKDGSQERLLVEDSNL 392
           A   M   G+  + L    ++
Sbjct: 225 AEFSMDLYGTYGQSLYPSQDV 245



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/289 (12%), Positives = 87/289 (30%), Gaps = 64/289 (22%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---- 259
           + L+   +  +  P FSP   KVAY          +Y          +   + +      
Sbjct: 134 KSLSKIDEGKIQSPTFSPKGGKVAYV-----KNNNIYSYFISTGETTQITSDGKKNEVIN 188

Query: 260 -------------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE----------- 295
                        + A  +S NG +       +  +  +S+DL     +           
Sbjct: 189 GVTDWVYEEEFAFVRAFEWSPNGNQMAFLRFDESEVAEFSMDLYGTYGQSLYPSQDVFKY 248

Query: 296 ------------RLTNTLFINIS----------AS--YSPDSSQIVFESDREGKEQLYVM 331
                        L +    + S              ++ D +    +S    + +L V 
Sbjct: 249 PKAGEDNAKVSLHLFDFEGNSTSKIDLGEYEYLPRLKWTADENLFSVQSLNRYQNELKVY 308

Query: 332 QSNG-SDQKRISQDKEASYFDPVWSP----QGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             +  +++ +++  ++ + +  V +       +   +T        I    +DGS    +
Sbjct: 309 LVDTKTNEAKLTLTEKDTAYVDVTNDLTFLNNNSFIWTSEKDGWKHIYHYAQDGSLINQV 368

Query: 387 VEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
              +    +   +      + F   ++G     +YS+  N +N+  + T
Sbjct: 369 TSGAWEVTKFYGFDDRSGRIYFQSTENGSVNRDVYSVLANAKNKLRLTT 417


>gi|86606571|ref|YP_475334.1| S9C family peptidase [Synechococcus sp. JA-3-3Ab]
 gi|86555113|gb|ABD00071.1| peptidase, S9C (acylaminoacyl-peptidase) family [Synechococcus sp.
           JA-3-3Ab]
          Length = 644

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 10/115 (8%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKE----QLY 329
           S Q +    + S+DL S + + L +      S   SPD   +V+   D         +L+
Sbjct: 139 SRQGEPENSLVSIDLASGSQQILASGHDFYASPRLSPDGQNLVWLTWDHPQMPWDGTELW 198

Query: 330 V--MQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              + ++G   + ++++     S F P WSPQGD + F       + +      G
Sbjct: 199 RAEVAADGTLGEPQKLAGGPAESIFQPQWSPQGD-LYFVSDRSGWWNLYRWDPQG 252



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 50/138 (36%), Gaps = 11/138 (7%)

Query: 163 YQSITGEKGDFNSRILFVSESVVS-GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           Y+   G       RIL V E     G  +NSL  +D    + + L    D     PR SP
Sbjct: 117 YRYADGVVDRARGRILCVREDHSRQGEPENSLVSIDLASGSQQILASGHDFYA-SPRLSP 175

Query: 222 NQQKVAYATYDDEDI-------LRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRAL 273
           + Q + + T+D   +        R  +        P+++    +  I  P++S  G    
Sbjct: 176 DGQNLVWLTWDHPQMPWDGTELWRAEVAADGTLGEPQKLAGGPAESIFQPQWSPQGD-LY 234

Query: 274 ISVQKDEAMDIYSVDLQS 291
               +    ++Y  D Q 
Sbjct: 235 FVSDRSGWWNLYRWDPQG 252



 Score = 46.2 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 67/178 (37%), Gaps = 25/178 (14%)

Query: 289 LQSNATERLTNTLFI-------NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
               A + LT   F            +Y      + F +  +  ++LY +   GSD + +
Sbjct: 55  AAGGAVQELTPAPFNVRTRVHEYGGGAYWVSEGVVYFCNFAD--QRLYRL-LPGSDPQPL 111

Query: 342 SQDKEASYFDPVW-SPQGDLIAF----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-AP 395
           ++     Y D V    +G ++      ++    + ++  +      +++L    +   +P
Sbjct: 112 TEAGPYRYADGVVDRARGRILCVREDHSRQGEPENSLVSIDLASGSQQILASGHDFYASP 171

Query: 396 TWSPSGRSLIFSRKKDGDT---GSKLYSIDLN-----GRNETLINTPAYASD-PQWVG 444
             SP G++L++           G++L+  ++      G  + L   PA +   PQW  
Sbjct: 172 RLSPDGQNLVWLTWDHPQMPWDGTELWRAEVAADGTLGEPQKLAGGPAESIFQPQWSP 229


>gi|46124481|ref|XP_386794.1| hypothetical protein FG06618.1 [Gibberella zeae PH-1]
          Length = 290

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 77/225 (34%), Gaps = 29/225 (12%)

Query: 219 FSPNQQKVAYAT---------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           FSP   ++A             D      V+L D    +    +   +   +A  +S +G
Sbjct: 63  FSPKGSRLATVRDWTVQLTGGVDFHHSTTVFLRDYVSGKTACELKEAKGEPIA--WSRDG 120

Query: 270 KRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +   +   +D    +   D+++       L++   I   A++ PDSS +     R+G  +
Sbjct: 121 RLVAVGEARD---RVGVYDVKNGTRVGMVLSHIDAI-THAAFLPDSSLV--TISRDGTLR 174

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +    +N    +R+  D   +      SP G  I      G    I V   +      L 
Sbjct: 175 I-TNTTNYKTIRRLEMDGSNNPRALAVSPDGRRIV--SVWGTNVHIWVPSANDVTSYNLN 231

Query: 388 EDSNLQAP--TWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNG 425
              + +      SP  R ++   +   D     TGS +Y     G
Sbjct: 232 AVRSYEGWPLAISPDCRYMLCRTEDGFDIMDVVTGSVVYEETTEG 276


>gi|258590983|emb|CBE67278.1| conserved hypothetical protein; putative quinoprotein amine
           dehydrogenase, beta chain-like [NC10 bacterium 'Dutch
           sediment']
          Length = 325

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 66/189 (34%), Gaps = 17/189 (8%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +AY   +  D + V    T        +G     +     S + +   I+     + DI 
Sbjct: 33  MAYVANEKSDDVSVIDTSTNTVIRTIAVGKRPRGV---AISPDRRHVYIA--NGNSDDIS 87

Query: 286 SVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
            +D +       T    ++    + SPD +++   ++  G   + V+ +        + +
Sbjct: 88  IIDAEVGKVVE-TWPAGVDPEGVALSPDGTRLYAVNENGGT--VTVINTKTGTVIA-TIE 143

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSG 401
            +        SP G  +A+         I V+  D +  ++L      + P    +SP G
Sbjct: 144 VQVEPESIAVSPDGQ-VAYVSNETSN-TISVI--DTATLKVLTAIPVAKNPRGIAFSPDG 199

Query: 402 RSLIFSRKK 410
           +    + ++
Sbjct: 200 KYAYVTSEQ 208



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 57/166 (34%), Gaps = 9/166 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ Q VAY + +  + + V    T        +      I    FS +GK A ++ +
Sbjct: 152 AVSPDGQ-VAYVSNETSNTISVIDTATLKVLTAIPVAKNPRGI---AFSPDGKYAYVTSE 207

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           + E   +  +++  +   +        +    S D   +     R     +YV+ +    
Sbjct: 208 QVEPGVLSVIEVARHKVIKSIPVGERPVGVVVSRDGRTLYVAHGRS--NAVYVVDARTLT 265

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             +     + +++   ++P    +      G   A+ V+     + 
Sbjct: 266 VTKQIPVGQRAWYL-AFTPDEQRLYVAC--GRSDAVSVIDVAAGKV 308


>gi|115486121|ref|NP_001068204.1| Os11g0594200 [Oryza sativa Japonica Group]
 gi|77551780|gb|ABA94577.1| Notchless, putative, expressed [Oryza sativa Japonica Group]
 gi|113645426|dbj|BAF28567.1| Os11g0594200 [Oryza sativa Japonica Group]
 gi|215767303|dbj|BAG99531.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222616248|gb|EEE52380.1| hypothetical protein OsJ_34468 [Oryza sativa Japonica Group]
          Length = 480

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 65/155 (41%), Gaps = 13/155 (8%)

Query: 182 ESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    ++ + +       +       +++    FSP+ Q +A A++D      V 
Sbjct: 337 ERLVSGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDK----SVK 392

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTN 299
           L +    +         + +    +S++  R L+S  KD  + ++  D++++  ++ L  
Sbjct: 393 LWNGITGKFVAAFRGHVADVYQISWSAD-SRLLLSGSKDSTLKVW--DIRTHKLKQDLPG 449

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                 +  +SPD  ++       GK+++  +  N
Sbjct: 450 HADEVYAVDWSPDGEKVA----SGGKDRVLKLWMN 480



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 9/105 (8%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + +    FSP+ + +A  + D      V   D             ++ +L   +S +
Sbjct: 113 GHTEAVLAVSFSPDGRCLASGSGDT----TVRFWDLNTQTPLFTCKGHKNWVLCIAWSPD 168

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP 311
           G   + S  K   + ++  D ++       LT       + S+ P
Sbjct: 169 GNHLV-SGSKSGELILW--DPKTGKQLGTPLTGHRKWITAVSWEP 210



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 72/262 (27%), Gaps = 46/262 (17%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D +     +        +    +SP+   +       +    +      
Sbjct: 132 SGSGDTTVRFWDLNTQTPLFTCKGHKNWVLCIAWSPDGNHLV---SGSKSGELILWDPKT 188

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRA----LISVQKDEAMDIYSVDLQSNA-TERLTNT 300
             +    +   R  I A  +     +A     +S  KD    I+  D+ +      LT  
Sbjct: 189 GKQLGTPLTGHRKWITAVSWEPVHLQAPCRRFVSASKDGDARIW--DITTRKCVIALTGH 246

Query: 301 LFINISASYSPDSSQIVFESDRE----------GK------EQLYVMQSNGSDQKRISQD 344
                   +  D   +++    +          GK         + + S     + I + 
Sbjct: 247 TNSVTCVKWGGDG--LIYTGSEDCLIKVWETSQGKLVKTLQGHGHWVNSLALSTEYILRT 304

Query: 345 KEASYFDPVWS-PQGDLIA----FTKFSGE----------KFAIGVMKKDGSQE---RLL 386
               +    +S       A    + K  G            F + + +   S++   R+ 
Sbjct: 305 GAYDHTGKTYSTADEMKEAALARYKKMRGNAPERLVSGSDDFTMFLWEPTISKQPKARMT 364

Query: 387 VEDSNLQAPTWSPSGRSLIFSR 408
                +    +SP G+ L  + 
Sbjct: 365 GHQKLVNHVYFSPDGQWLASAS 386



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 49/132 (37%), Gaps = 6/132 (4%)

Query: 232 DDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L +  I + PK R+   + ++    FS +G+    S   D+++ +++  + 
Sbjct: 341 SGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLA-SASFDKSVKLWN-GIT 398

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                     +      S+S DS  ++  S       L V        K+         +
Sbjct: 399 GKFVAAFRGHVADVYQISWSADSRLLLSGSK---DSTLKVWDIRTHKLKQDLPGHADEVY 455

Query: 351 DPVWSPQGDLIA 362
              WSP G+ +A
Sbjct: 456 AVDWSPDGEKVA 467



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 43/150 (28%), Gaps = 11/150 (7%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++   +      R+T    +     +SPD   +   S     + + +  
Sbjct: 339 LVSGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASF---DKSVKLWN 395

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +   A  +   WS    L+           + V      + +  +     
Sbjct: 396 GITGKFVAAFRGHVADVYQISWSADSRLLLSGSKDST---LKVWDIRTHKLKQDLPGHAD 452

Query: 393 QAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
           +     WSP G  +        D   KL+ 
Sbjct: 453 EVYAVDWSPDGEKVA---SGGKDRVLKLWM 479


>gi|326798440|ref|YP_004316259.1| peptidase s9b dipeptidylpeptidase IV domain protein
           [Sphingobacterium sp. 21]
 gi|326549204|gb|ADZ77589.1| peptidase s9b dipeptidylpeptidase IV domain protein
           [Sphingobacterium sp. 21]
          Length = 749

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/294 (12%), Positives = 97/294 (32%), Gaps = 71/294 (24%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR-APKRIGN--------FR 257
             + +  L +  +S  ++++ +A Y+    L +       ++    R+ N        F+
Sbjct: 103 VNAENLPLTQFSYSIERKRLTFAAYEKGWDLDLSSGKVEENKEFTARLQNGRGYWGKRFK 162

Query: 258 SMILAPRFSSNGKRALIS-------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                  FS + +             ++        +    +A        + +   ++S
Sbjct: 163 GAQDRKTFSPDSQWVAYIKNYNVYIQRRKGNDKEVQLSFDGSA------GEYYDAWMAWS 216

Query: 311 PDSSQIVFESDREGKEQ-LYVMQSN-----------------GSDQKRISQ--------- 343
           PDS ++     R+ ++  LY+++S+                 G    + +          
Sbjct: 217 PDSKKLAAMKVRKNEDHTLYLIESSPDEQLQPKLQTRDYLKPGDALPQRTPTLFIVEEKK 276

Query: 344 ---------DKEASYFDPVWSPQGDL--IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                    + +     P W        + + +   +++ I  M       R+LV + + 
Sbjct: 277 VMAMPASLVENQYDLSFPAWRKDSRSFTVEYNQRGHQRYQIIEMNAQTGVARVLVNEQSK 336

Query: 393 QAPTWS--------PSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYA 437
               +S          G+ +I++ ++DG   + LY  D L+G+ +  I    + 
Sbjct: 337 TFIDYSGKKYRYDVADGKEIIWTSERDG--WNHLYLYDGLSGKVKNQITKGEWV 388



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 69/215 (32%), Gaps = 29/215 (13%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS------- 266
           L  P +  + +                +         + + N +S      +S       
Sbjct: 291 LSFPAWRKDSRSFTVEYNQRGHQRYQIIEMNAQTGVARVLVNEQSKTFI-DYSGKKYRYD 349

Query: 267 -SNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINIS-ASYSPDSSQIVF-ESDR 322
            ++GK  + + ++D    +Y  D  S   + ++T   ++          + QI+F  S R
Sbjct: 350 VADGKEIIWTSERDGWNHLYLYDGLSGKVKNQITKGEWVVRKVVHVDEKTRQIIFAASGR 409

Query: 323 EGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----------FTKFS 367
           E  +     Q Y +  +G+  K ++   E +  D  +SP   L             T   
Sbjct: 410 EKGQDPYLIQYYRINFDGTGLKALT--NENANHDANFSPNHKLFVDQYSRVDLAPVTCIR 467

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +M  + +  R L+         ++  GR
Sbjct: 468 DAATGKVLMDLERADIRPLIATGWKMPEVFTSKGR 502


>gi|302864568|ref|YP_003833205.1| hypothetical protein Micau_0060 [Micromonospora aurantiaca ATCC
           27029]
 gi|302567427|gb|ADL43629.1| hypothetical protein Micau_0060 [Micromonospora aurantiaca ATCC
           27029]
          Length = 368

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 67/201 (33%), Gaps = 25/201 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++V +     ++   V L+ T  D+    +    S   A      G   L+  +
Sbjct: 145 SVSPDGKRVVWVQDSTDNASGVLLIATVGDKGATTLAEGISCFGARPMRWKGDDRLMVQR 204

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           K+    +Y V       +++           +S D + +  ESD  GK  +    S+ +D
Sbjct: 205 KNGQSVLYDVVAN----KQVVGDPGQETKRCWSADGTWLAAESD--GKPYV----SDTTD 254

Query: 338 QKRISQDKEA-------SYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQER 384
            ++ +             +     S  G  +A              F   V+    S+  
Sbjct: 255 LRQYTYTPPQQEAAKWDGWEARSVSTDGRYVAVGWIGTDPSRRDGSF--AVVDTRTSKVV 312

Query: 385 LLVEDSNLQAPTWSPSGRSLI 405
            L     +++  +S  G  L+
Sbjct: 313 DLPGTGEVRSILFSADGTVLL 333


>gi|238881561|gb|EEQ45199.1| hypothetical protein CAWG_03513 [Candida albicans WO-1]
          Length = 797

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 88/226 (38%), Gaps = 25/226 (11%)

Query: 220 SPNQQKVAYA---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           SP+ + +A A         ++RV+ +     ++ + +      I +  FS +GK  L +V
Sbjct: 573 SPDGKLIASACRSNNAKHAVIRVFNVAQDYQQSQQVLSGHNLTISSLEFSPDGKYLL-AV 631

Query: 277 QKDEAMDIY-SVDLQSNATERLT----NTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +D    ++  ++ QS + + +         I    S+ P        S R+ + +L+ +
Sbjct: 632 SRDRQFSLWEVINEQSGSFKLVELNPKAHARILWDCSWFPVGDSFTTVS-RDKQIKLWKV 690

Query: 332 QSNGSDQKRISQDKEASYFDPVWSP---QGDLIAFTKFSGEKFAIGVMKKDGSQERL--- 385
            ++  +    ++  +A     V+         I          +I  +     + RL   
Sbjct: 691 SNDKVEMVVSTKLNDAITSVSVYKGGLFNNQAIVAVGLEDGGISIFAVDVANPEFRLISI 750

Query: 386 ----LVEDSNLQAPTWS---PSGRSLIFSRKKDGDTGSKLYSIDLN 424
               L   + ++  ++S    +G+ L+    K  DT ++LYSID  
Sbjct: 751 VDKELTPSNRIEKLSFSNKLHNGKLLLGVGSK--DTSARLYSIDST 794


>gi|17232369|ref|NP_488917.1| WD repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17134014|dbj|BAB76576.1| WD-repeat protein [Nostoc sp. PCC 7120]
          Length = 598

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 88/287 (30%), Gaps = 34/287 (11%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E +LWD+   + I       + + +  I   + D++        G          + +VS
Sbjct: 324 ETKLWDLNQGELI------DTLSEYPWIVSGLVDEVNSLAFSADG----------QMLVS 367

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G   +++ +      ++  +    + I+    F+P+ Q +A       D  R+   D   
Sbjct: 368 GGADSTIKIWHTGALDLIDILHKHNGIVRCAAFTPDGQMLA----TGGDDRRILFWDLMH 423

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE------RLTNT 300
            +    +    +   +   S +G+  +    +   +   S        +       L   
Sbjct: 424 RQVKAILSLDDTAAHSLVLSRDGQTLVTGSYRKIKVWQTSGSWFGKNLKDAQPLHTLMGH 483

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I  S + S D   ++  S     + + +         R  +      +    SP   +
Sbjct: 484 GHIVRSLAMSKDGQLLISGS---WDQTIKIWHLATGRLIRTLKGHTDKVYAIALSPDEQI 540

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
           IA          I +   +  +             A T++ SG  L+
Sbjct: 541 IASGSSDQT---IKLWHLETGELLATFTGHTDIVTALTFTTSGEMLV 584


>gi|68470910|ref|XP_720462.1| hypothetical protein CaO19.2711 [Candida albicans SC5314]
 gi|68471368|ref|XP_720232.1| hypothetical protein CaO19.10226 [Candida albicans SC5314]
 gi|46442090|gb|EAL01382.1| hypothetical protein CaO19.10226 [Candida albicans SC5314]
 gi|46442331|gb|EAL01621.1| hypothetical protein CaO19.2711 [Candida albicans SC5314]
          Length = 797

 Score = 52.3 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/226 (17%), Positives = 88/226 (38%), Gaps = 25/226 (11%)

Query: 220 SPNQQKVAYA---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           SP+ + +A A         ++RV+ +     ++ + +      I +  FS +GK  L +V
Sbjct: 573 SPDGKLIASACRSNNAKHAVIRVFNVAQDYQQSQQVLSGHNLTISSLEFSPDGKYLL-AV 631

Query: 277 QKDEAMDIY-SVDLQSNATERLT----NTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +D    ++  ++ QS + + +         I    S+ P        S R+ + +L+ +
Sbjct: 632 SRDRQFSLWEVINEQSGSFKLVELNPKAHARILWDCSWFPVGDSFTTVS-RDKQIKLWKV 690

Query: 332 QSNGSDQKRISQDKEASYFDPVWSP---QGDLIAFTKFSGEKFAIGVMKKDGSQERL--- 385
            ++  +    ++  +A     V+         I          +I  +     + RL   
Sbjct: 691 SNDKVEMVVSTKLNDAITSVSVYKGGLFNNQAIVAVGLEDGGISIFAVDVANPEFRLISI 750

Query: 386 ----LVEDSNLQAPTWS---PSGRSLIFSRKKDGDTGSKLYSIDLN 424
               L   + ++  ++S    +G+ L+    K  DT ++LYSID  
Sbjct: 751 VDKELTPSNRIEKLSFSNKLHNGKLLLGVGSK--DTSARLYSIDST 794


>gi|326428694|gb|EGD74264.1| hypothetical protein PTSG_06273 [Salpingoeca sp. ATCC 50818]
          Length = 560

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 91/263 (34%), Gaps = 29/263 (11%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              G F+           SG    ++ V +  G N + L      +     F+P    + 
Sbjct: 271 HPGGAFSVAHSCSGSLFASGGADATVKVWNSSGHNTQSLREHTGTVTCI-DFAPAGDTMV 329

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            A+ D      V +   R  R+  R       +   RF   G   ++S  +D  M +++ 
Sbjct: 330 SASNDK----SVLIWSLRTSRSTFRCTGHTDKVYTARFL--GHTKVVSASQDRTMKLWNA 383

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKR-ISQDK 345
               +    L ++   +I+   S D  +  F S   +   + +  + +G+   R ++ + 
Sbjct: 384 ARGISERTYLLHSTCYDIA---SVDGPR--FLSGHFDKYVREWDTRQSGTKPVRELNTEH 438

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-------VEDSNLQAPTWS 398
             +      SP  D +  +   G    + ++     Q R++           +   P++S
Sbjct: 439 REAIVAVALSPTRDYLLTSCRDG---QLKLVDL--LQMRVVKSFTSDDATGQSACHPSFS 493

Query: 399 PSGRSLIFSRKKDGDTGSKLYSI 421
           P G      R+       ++++I
Sbjct: 494 PDGAHFAVGRQSG---VIEIWNI 513


>gi|301100874|ref|XP_002899526.1| WD repeat protein 39 [Phytophthora infestans T30-4]
 gi|262103834|gb|EEY61886.1| WD repeat protein 39 [Phytophthora infestans T30-4]
          Length = 287

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 58/178 (32%), Gaps = 21/178 (11%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P  SP+ + +A  ++D      ++            +    S + +  +S +G     
Sbjct: 14  HHPSLSPDGRYLASVSFD--GTTVIWEKQGSSYEVISSLEGHESEVKSVAWSPSGSYLA- 70

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISA---------SYSPDSSQIVFESDREGK 325
           +  +D+++ I+  D         T+   I++           ++ P    +V  S  +  
Sbjct: 71  TCSRDKSVWIWEADAD-------TDFECISVLHAHMQDVKFVAWHPKEDLLVSASY-DDT 122

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            +++    +    K       A+ +    SPQG  +A          I     +  + 
Sbjct: 123 IRIWAENDDDWYCKETLTGHTATVWGVALSPQGTEMASVS-DDTDVIIWQYDSNSKEV 179



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 77/269 (28%), Gaps = 40/269 (14%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEP-----------RFSPNQQKVAYATYDDEDILRV 239
             L  +  DG  + +        +               +SP+   +A  + D    + +
Sbjct: 23  RYLASVSFDGTTVIWEKQGSSYEVISSLEGHESEVKSVAWSPSGSYLATCSRD--KSVWI 80

Query: 240 YLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERL 297
           +  D   D      +      +    +    +  L+S   D+ + I++ +       E L
Sbjct: 81  WEADADTDFECISVLHAHMQDVKFVAWHPK-EDLLVSASYDDTIRIWAENDDDWYCKETL 139

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR------------ISQDK 345
           T         + SP  +++   SD +    ++   SN  +               +S   
Sbjct: 140 TGHTATVWGVALSPQGTEMASVSD-DTDVIIWQYDSNSKEVNEDGGSKQWKLKFTLSNCH 198

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE------RLLVEDSNLQAPTWSP 399
           E + F   WS  G  +                 D          +     S++    WSP
Sbjct: 199 ERTIFSVDWSKHGAFLVTGAADNAIRVFQGQPNDTPSSFDLAICQKEAHASDINCVRWSP 258

Query: 400 -----SGRSLIFSRKKDGDTGSKLYSIDL 423
                 G+          D   +++S+ +
Sbjct: 259 QLLEDKGKKTFLLASAGDDALVRIWSMTI 287



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 5/122 (4%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              R +         S SPD   +   S  +G   ++  Q +  +     +  E+     
Sbjct: 2   GVRRHSRGRTDPHHPSLSPDGRYLASVSF-DGTTVIWEKQGSSYEVISSLEGHESEVKSV 60

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRK 409
            WSP G  +A        + I     D   E    L     +++   W P    L+ +  
Sbjct: 61  AWSPSGSYLATCSRDKSVW-IWEADADTDFECISVLHAHMQDVKFVAWHPKEDLLVSASY 119

Query: 410 KD 411
            D
Sbjct: 120 DD 121



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 10/104 (9%)

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAP 395
           R           P  SP G  +A   F G      + +K GS   ++      +S +++ 
Sbjct: 4   RRHSRGRTDPHHPSLSPDGRYLASVSFDGTTV---IWEKQGSSYEVISSLEGHESEVKSV 60

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            WSPSG  L    +   D    ++  D +   E +    A+  D
Sbjct: 61  AWSPSGSYLATCSR---DKSVWIWEADADTDFECISVLHAHMQD 101


>gi|194890443|ref|XP_001977310.1| GG18968 [Drosophila erecta]
 gi|190648959|gb|EDV46237.1| GG18968 [Drosophila erecta]
          Length = 313

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 59/153 (38%), Gaps = 6/153 (3%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE---DILRVYLMD 243
           G    S+ + D        + P  D  + +   SP+ + +A A          L      
Sbjct: 141 GSQNGSVFLWDVKSERHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSQDQK 200

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R  K+I      IL  +FS +  R L++   D  + I+  D   +    L+   + 
Sbjct: 201 MSTLRPTKKILAHTRYILRCKFSPD-SRLLLTTSGDGTVGIWKTD-DFSKWRELSIENYW 258

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              A++S DS  + F +  +G  +L+ +Q+  S
Sbjct: 259 VWDAAFSADSKWL-FTASSDGIARLWKLQTKSS 290



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 62/183 (33%), Gaps = 13/183 (7%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG     +  +D  + I+ +        R+ +      +A   P+  +I   S       
Sbjct: 91  NGNWM-FTAGEDHHVRIWDMIAAPPHCSRVFDCEAPVNAACLHPNQVEIAMGSQ---NGS 146

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD------GS 381
           +++        +RI  + +AS  D   SP G  +A     G  +   +  +D        
Sbjct: 147 VFLWDVKSERHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSQDQKMSTLRP 206

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            +++L     +    +SP  R L+ +    GD    ++  D   +   L     +  D  
Sbjct: 207 TKKILAHTRYILRCKFSPDSRLLLTTS---GDGTVGIWKTDDFSKWRELSIENYWVWDAA 263

Query: 442 WVG 444
           +  
Sbjct: 264 FSA 266



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 62/168 (36%), Gaps = 15/168 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            PNQ ++A           V+L D + +R  + +    + I     S +G+    +    
Sbjct: 132 HPNQVEIA----MGSQNGSVFLWDVKSERHERIVPEVDASIQDVAISPDGRYLA-AANNK 186

Query: 280 EAMDIYSVDLQS------NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
               I+S+  Q         T+++       +   +SPDS  ++  S  +G   ++    
Sbjct: 187 GNCYIWSLTSQDQKMSTLRPTKKILAHTRYILRCKFSPDSRLLLTTSG-DGTVGIWKTD- 244

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           + S  + +S +    + D  +S     + FT  S     +  ++   S
Sbjct: 245 DFSKWRELSIENYWVW-DAAFSADSKWL-FTASSDGIARLWKLQTKSS 290


>gi|85707747|ref|ZP_01038813.1| dipeptidyl anminopeptidase [Erythrobacter sp. NAP1]
 gi|85689281|gb|EAQ29284.1| dipeptidyl anminopeptidase [Erythrobacter sp. NAP1]
          Length = 660

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 6/93 (6%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPS 400
              +      SP G  +++     +   I +  +D   +   +  +  + P     WSP 
Sbjct: 29  GNPTRAQGQISPDGKWLSWLAPHNDVLNIWLAPRDNPDDARAMTSATDR-PIRQHMWSPD 87

Query: 401 GRSLIFSRKKDGDTGSKLYSID-LNGRNETLIN 432
           G SL++ + K GD    LY +D ++G   TL  
Sbjct: 88  GTSLLYIQDKAGDENFLLYRVDVVSGEETTLTP 120



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 79/227 (34%), Gaps = 17/227 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQ 277
            SP+ + +++      D+L ++L         + + +     +    +S +G   L    
Sbjct: 38  ISPDGKWLSWLA-PHNDVLNIWLAPRDNPDDARAMTSATDRPIRQHMWSPDGTSLLYIQD 96

Query: 278 K--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQ-LYVM 331
           K  DE   +Y VD+ S     LT      +    S ++ +       ++R+ +   ++ +
Sbjct: 97  KAGDENFLLYRVDVVSGEETTLTPFEDTRVQIVGSSETIKNAILVGLNNRDPQWHDVHRL 156

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                + + I    E + F    +       +A  +             +  +E      
Sbjct: 157 NLTTGELELIY---ENNAFAGFMADDTLTLRMAMAQNDAGGTDYFRFDGNSVEEEPFETT 213

Query: 390 SNLQAPTWSPSG----RSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +   + T SP+G     S+++     G   + LY+ D      TLI 
Sbjct: 214 AMEDSMTTSPAGYTVDGSVLYWLDGRGRNTAALYAQDTATGERTLIA 260


>gi|158315535|ref|YP_001508043.1| WD-40 repeat-containing serine/threonin protein kinase [Frankia sp.
           EAN1pec]
 gi|158110940|gb|ABW13137.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EAN1pec]
          Length = 806

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 76/220 (34%), Gaps = 13/220 (5%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + +A A  +   I    L D         I      + +  F+  G     +   D 
Sbjct: 481 PDGRLLA-AGTEAGTIELWDLTDLAHPVHAGTISGVGDWVYSVAFNPGGNLLA-AGVGDG 538

Query: 281 AMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           A+ +++V    ++ A   +        S +++PD   +    D +G+  L+ +      Q
Sbjct: 539 AVRLWNVTDPARAGALATIAFHRDRVRSVAFAPDGGTLASGGD-DGQVGLWAVTDPSHPQ 597

Query: 339 KR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVEDSNLQAP 395
           +R  +    A      +SP+G L+A     G      V       +   L      +Q+ 
Sbjct: 598 RRSATDGAVAGIRSLAFSPRGGLLALAGNDGSVRLWNVADPARPATSSTLRGTGRTVQSV 657

Query: 396 TWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTP 434
            +S    +L       G D     + +D  G    L +TP
Sbjct: 658 AFSADSSTLA----AGGIDGSVHTWRVDGPGSVVDLGSTP 693


>gi|332708628|ref|ZP_08428601.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lyngbya
           majuscula 3L]
 gi|332352584|gb|EGJ32151.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lyngbya
           majuscula 3L]
          Length = 779

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 38/99 (38%), Gaps = 4/99 (4%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--- 395
           +R     +        SP G  +AF K       + V   +   E      ++ ++P   
Sbjct: 47  QRELFFGDPEITGAQLSPDGQFLAFQKPLDGVINVWVKGINEPMEAARPVTADAESPIII 106

Query: 396 -TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             WS  GR +++ + K G+    +Y+++     ET   T
Sbjct: 107 YFWSADGRYILYGQDKGGNENFHIYAVEAKSLGETSPVT 145



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 16/141 (11%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             A  SPD   + F+   +G   ++V  +       + ++ D E+      WS  G  I 
Sbjct: 58  TGAQLSPDGQFLAFQKPLDGVINVWVKGINEPMEAARPVTADAESPIIIYFWSADGRYIL 117

Query: 363 FTKFSGE--KFAIGVMKKDGSQE-----RLLVEDSNLQAPTWS-----PSGRSLIFSRKK 410
           + +  G    F I  ++     E     R L     + A  +S     P+   +I    +
Sbjct: 118 YGQDKGGNENFHIYAVEAKSLGETSPVTRDLTPVEGITASIYSVPKRTPN--HIIIGLNE 175

Query: 411 DGDTGSKLYSIDLNGRNETLI 431
                  +Y +DL     TL+
Sbjct: 176 RNPQFHDVYRLDLTTGERTLL 196



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 68/196 (34%), Gaps = 30/196 (15%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTNTLFINISA- 307
           + +      I   + S +G+        D  ++++   ++    A   +T       S  
Sbjct: 48  RELFFGDPEITGAQLSPDGQFLAFQKPLDGVINVWVKGINEPMEAARPVTADA---ESPI 104

Query: 308 ---SYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQD-------KEASYFDPVW 354
               +S D   I++  D+ G E  ++         +   +++D         + Y  P  
Sbjct: 105 IIYFWSADGRYILYGQDKGGNENFHIYAVEAKSLGETSPVTRDLTPVEGITASIYSVPKR 164

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           +P   +I   + + +   +  +     +  LL+++ +  A          +++   DG+ 
Sbjct: 165 TPNHIIIGLNERNPQFHDVYRLDLTTGERTLLIQNDDNIA----------LWTTDLDGNV 214

Query: 415 GSKLYSIDLNGRNETL 430
               Y   L G +E L
Sbjct: 215 RIG-YRQTLEGGHEIL 229



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 74/225 (32%), Gaps = 15/225 (6%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--GNFRSMI 260
           ++      D  +   + SP+ Q +A+     + ++ V++          R    +  S I
Sbjct: 46  LQRELFFGDPEITGAQLSPDGQFLAF-QKPLDGVINVWVKGINEPMEAARPVTADAESPI 104

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDL------QSNATER-LTNTLFINISASYSPDS 313
           +   +S++G+  L    K    + +   +      +++   R LT    I  S    P  
Sbjct: 105 IIYFWSADGRYILYGQDKGGNENFHIYAVEAKSLGETSPVTRDLTPVEGITASIYSVPKR 164

Query: 314 S-QIVFESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +   +     E   Q   +Y +     ++  + Q+ +              I + +    
Sbjct: 165 TPNHIIIGLNERNPQFHDVYRLDLTTGERTLLIQNDDNIALWTTDLDGNVRIGYRQTLEG 224

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGD 413
              I  ++KDG              P  +   G+ +     +DG+
Sbjct: 225 GHEILAVQKDGLTPVYTCRIEETCVPIRFHKDGQRVYLISNRDGN 269


>gi|218531020|ref|YP_002421836.1| hypothetical protein Mchl_3070 [Methylobacterium chloromethanicum
           CM4]
 gi|218523323|gb|ACK83908.1| WD-40 repeat protein [Methylobacterium chloromethanicum CM4]
          Length = 438

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 77/240 (32%), Gaps = 26/240 (10%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G  N+          S      + +     A    +       +     SP+   VA A 
Sbjct: 72  GAVNAVAALPDGRFASASEDGRIALWRLGQAEPDCVLAGHAGPVAGLAVSPDGTMVASAA 131

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +D     R++ +        + +   +  + A  F  +G+  L++   D ++ I++    
Sbjct: 132 WD--GTARIWPL---AGGPARILEGHKGNVNAVAFLPDGR--LVTAGADASVRIWTP--- 181

Query: 291 SNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                 LT TL   +SA + + D           G +      ++    +   +   A  
Sbjct: 182 -QGETVLTATLPSALSALAVTTDGEIAA-----AGADATVRFLASDGQVRSEVELGPAPV 235

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS----PSGRSLI 405
                +P G  IA     G    + ++++     ++L        P WS    P G  L+
Sbjct: 236 IALAPAPDGTRIAAASAGGT---VAMIERASG--KILFTLVGPGLPVWSLAWRPDGSELV 290


>gi|218530567|ref|YP_002421383.1| hypothetical protein Mchl_2615 [Methylobacterium chloromethanicum
           CM4]
 gi|218522870|gb|ACK83455.1| WD-40 repeat protein [Methylobacterium chloromethanicum CM4]
          Length = 335

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 91/271 (33%), Gaps = 20/271 (7%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G +  S     R +A        +    + G +   +    +   +     ++   D  G
Sbjct: 66  GARLVSGGDDGRVVATAADGRSSELAQAKGGGWIDALALHGDGSFAFASGRAIIARDAKG 125

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                  P+  + L    F+P   ++A A Y+      V L    ++  P+ I  ++   
Sbjct: 126 REKTLTAPTTGRGL---AFAPKGYRLAVAHYNG-----VSLWYPNLETPPEFI-EWKGSH 176

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           L   +S +G+  + ++Q++ A+  + +        R++       S S+S D   +    
Sbjct: 177 LDVTWSPDGRFVVSTMQEN-ALHGWRLQPDRGHM-RMSGYPAKVRSLSWSSDGKWLA--- 231

Query: 321 DREGKEQLYVMQSN-----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              G E   V   +          R    + A      + P+  ++A     G    +  
Sbjct: 232 -TSGAEAAIVWPFDSKEGPTGKAPRECGVRPARVSQVAFHPKAPVLAIGYEDGCVLLVRF 290

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                   R  V+ S + A  W P+G  L F
Sbjct: 291 SDASELLVRPAVKGSAISALAWDPAGARLAF 321



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 65/221 (29%), Gaps = 22/221 (9%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-----YDDEDILRVYLMDT 244
           K +L +   DG     +  +RD         P+   +  A+         D  RV     
Sbjct: 28  KGTLALALADGG----VLLARDGATETVAAHPDSGILVAASDGARLVSGGDDGRVVATAA 83

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               +          I A     +G  A  S +      I + D +      LT      
Sbjct: 84  DGRSSELAQAKGGGWIDALALHGDGSFAFASGRA-----IIARDAKGREKT-LTA-PTTG 136

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +++P   ++              +     +      + + S+ D  WSP G  +  T
Sbjct: 137 RGLAFAPKGYRLAVA-----HYNGVSLWYPNLETPPEFIEWKGSHLDVTWSPDGRFVVST 191

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                     +   D    R+    + +++ +WS  G+ L 
Sbjct: 192 MQENALHGWRLQ-PDRGHMRMSGYPAKVRSLSWSSDGKWLA 231



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 79/183 (43%), Gaps = 18/183 (9%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           +S+G R + S   D  +   + D +S+   +     +I+  A    D S   F S R   
Sbjct: 63  ASDGARLV-SGGDDGRVVATAADGRSSELAQAKGGGWIDALA-LHGDGS-FAFASGRA-- 117

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             +    + G ++   +     +     ++P+G  +A   ++G   ++     +   E +
Sbjct: 118 --IIARDAKGREK---TLTAPTTGRGLAFAPKGYRLAVAHYNG--VSLWYPNLETPPEFI 170

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS----IDLNGRNETLINTPAYASDPQ 441
             + S+L   TWSP GR ++ + +++   G +L      + ++G    + +  +++SD +
Sbjct: 171 EWKGSHLDV-TWSPDGRFVVSTMQENALHGWRLQPDRGHMRMSGYPAKVRSL-SWSSDGK 228

Query: 442 WVG 444
           W+ 
Sbjct: 229 WLA 231


>gi|145257217|ref|XP_001401653.1| aminopeptidase C [Aspergillus niger CBS 513.88]
 gi|134058565|emb|CAK96452.1| unnamed protein product [Aspergillus niger]
          Length = 663

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 54/162 (33%), Gaps = 19/162 (11%)

Query: 211 DQILFEPRF--SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRF 265
           D+ ++   F   P + ++ +A  +D     V      I+   K++            P F
Sbjct: 122 DEKIWYAAFNSHPKRPELVFAIREDHHGKEVVNELVVINTGNKKVEVAATGADFYSHPTF 181

Query: 266 SSNGKRALISVQKDE-----AMDIYSVDLQS---NATERLTNTLFINI--SASYSPDSSQ 315
           S  G R                +++S   +        +L             + PD + 
Sbjct: 182 SPAGDRVSWIQWNHPEMPWTGTELFSAPWKDEKVGTPVKLAGNGDEESILQPRWGPDGTL 241

Query: 316 IVFESDREGKEQLYVMQSNGSDQKR---ISQDKEASYFDPVW 354
             F SDR G  Q Y    +GSD+ R   I   ++  +  P W
Sbjct: 242 F-FVSDRTGYWQFYRWSPDGSDEPRAIVIEGLEKGEFAHPEW 282



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 9/128 (7%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           ++F       G    +  V+   G     +  +       P FSP   +V++  ++  ++
Sbjct: 139 LVFAIREDHHGKEVVNELVVINTGNKKVEVAATGADFYSHPTFSPAGDRVSWIQWNHPEM 198

Query: 237 L-------RVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                        D ++    K  GN     IL PR+  +G        +      Y   
Sbjct: 199 PWTGTELFSAPWKDEKVGTPVKLAGNGDEESILQPRWGPDGT-LFFVSDRTGYWQFYRWS 257

Query: 289 LQSNATER 296
              +   R
Sbjct: 258 PDGSDEPR 265


>gi|156740997|ref|YP_001431126.1| hypothetical protein Rcas_1000 [Roseiflexus castenholzii DSM 13941]
 gi|156232325|gb|ABU57108.1| conserved hypothetical protein [Roseiflexus castenholzii DSM 13941]
          Length = 954

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 77/203 (37%), Gaps = 46/203 (22%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R + P+   I    +F+P  + +     D    LRV +   R    P      R  + +
Sbjct: 55  PRDVGPAGHLITGMTKFAPGSKLLI---RDQAGQLRVLIDTARPAGDPLNPLGLR-DVQS 110

Query: 263 PRFSSNGKRALISV---------QKDEAM----DIYSVDLQSNATERLTNTL-------- 301
           P  S + +R + +          Q +        ++ + +      +LT++         
Sbjct: 111 PDVSFDARRIVFAGTFGPETFRNQPNGRPYYSWRLFEIGVDGRGLRQLTHSDRDITIPEG 170

Query: 302 ---------FINISASYSPDSSQIVFESDR-------EGKE--QLYVMQSNGSDQKRISQ 343
                    + ++  +Y  D  +IVF S R       +G+    LY++  +G + +R++ 
Sbjct: 171 PANAEAYAFYDDLFPAYLADG-RIVFSSSRYPARSPYDGRRSFNLYMIDGDGGNMRRLTT 229

Query: 344 DKEASYFDPVWSPQGDLIAFTKF 366
           ++ A+   P   P G  I F+++
Sbjct: 230 ERSAAL-HPAPLPDGR-IVFSRW 250



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 37/135 (27%), Gaps = 39/135 (28%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------------FAIGVMKKDGSQERLLV 387
           ++         P  S     I F    G +             + +  +  DG   R L 
Sbjct: 100 LNPLGLRDVQSPDVSFDARRIVFAGTFGPETFRNQPNGRPYYSWRLFEIGVDGRGLRQLT 159

Query: 388 ED------------------SNLQAPTWSPSGRSLIFSRKK-------DGDTGSKLYSID 422
                                +   P +   GR ++FS  +       DG     LY ID
Sbjct: 160 HSDRDITIPEGPANAEAYAFYDDLFPAYLADGR-IVFSSSRYPARSPYDGRRSFNLYMID 218

Query: 423 LNGRNETLINTPAYA 437
            +G N   + T   A
Sbjct: 219 GDGGNMRRLTTERSA 233



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 48/142 (33%), Gaps = 25/142 (17%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           F ++          L  +  DG  +R LT S   I       P     A A    +D+  
Sbjct: 131 FRNQPNGRPYYSWRLFEIGVDGRGLRQLTHSDRDITI-----PEGPANAEAYAFYDDLFP 185

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEAMDIYSVDLQSNATERL 297
            YL D RI           S    P  S  +G+R         + ++Y +D       RL
Sbjct: 186 AYLADGRI---------VFSSSRYPARSPYDGRR---------SFNLYMIDGDGGNMRRL 227

Query: 298 TNTLFINISASYSPDSSQIVFE 319
           T      +  +  PD  +IVF 
Sbjct: 228 TTERSAALHPAPLPDG-RIVFS 248



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 55/156 (35%), Gaps = 22/156 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI----------AHTISDDIYQSI 166
             +   R    +RL+++     + G+       S R I          A+   DD++ + 
Sbjct: 132 RNQPNGRPYYSWRLFEIG----VDGRGLRQLTHSDRDITIPEGPANAEAYAFYDDLFPAY 187

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
             +     S   + + S   G    +L ++D DG N+R LT  R      P   P+  ++
Sbjct: 188 LADGRIVFSSSRYPARSPYDGRRSFNLYMIDGDGGNMRRLTTERS-AALHPAPLPDG-RI 245

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            ++ +       V            RI N   M +A
Sbjct: 246 VFSRWW------VNFNQPSERGIYNRIDNRAGMEIA 275


>gi|332188646|ref|ZP_08390362.1| dipeptidyl peptidase IV (DPP IV) [Sphingomonas sp. S17]
 gi|332011314|gb|EGI53403.1| dipeptidyl peptidase IV (DPP IV) [Sphingomonas sp. S17]
          Length = 754

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 53/156 (33%), Gaps = 16/156 (10%)

Query: 261 LAPRFSSNGKRALI-SVQKD-EAMDIYSVDLQSNATERL---TNTLFINISASYSPD--- 312
            AP + ++ K      +++      I +VD  +         T   F+     +S D   
Sbjct: 289 SAPEWRTDSKSFAFNDLKRGFGQARIIAVDADTGQAHAAVTETAKTFVFRDRIWSHDVKG 348

Query: 313 -SSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
              +I++ S+R+G   LY++  + G   ++I++                 I F+      
Sbjct: 349 LGREILWTSERDGWRHLYLIDGATGRVIRQITKGNWIVRDIAKIDDDKRQIWFSASGFVP 408

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                      +  DG     L +++      ++P 
Sbjct: 409 GEDPYYKQWFRVDFDGRNLTRLTKENATHEVRFAPD 444



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/275 (14%), Positives = 78/275 (28%), Gaps = 53/275 (19%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R      PR SP+ +  A    D+  +                  NF        +S +G
Sbjct: 158 RVPADNHPRRSPDGRLEALVLDDNLVVREANGGKELWRSQDGSPANFYDTETI-AWSPDG 216

Query: 270 KRALISVQKDEAMDIYS-------------------------VDLQSNATERLTNTLFIN 304
           +   +   +     + +                         VD ++    R  +     
Sbjct: 217 RHIALQRVRPGYARMVTRVLAAPPGKVQPEVVQQLYPKPGDAVDQEAPVLFRTADGQRTE 276

Query: 305 ISAS------------YSPDSSQIVFESDREGKEQLYVMQSN---GSDQKRISQDKEASY 349
           I  S            +  DS    F   + G  Q  ++  +   G     +++  +   
Sbjct: 277 IDPSLFASAYTLSAPEWRTDSKSFAFNDLKRGFGQARIIAVDADTGQAHAAVTETAKTFV 336

Query: 350 F-DPVWSPQ----GDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNL--QAPTWSPSG 401
           F D +WS      G  I +T        + ++    G   R + + + +           
Sbjct: 337 FRDRIWSHDVKGLGREILWTSERDGWRHLYLIDGATGRVIRQITKGNWIVRDIAKIDDDK 396

Query: 402 RSLIFSRK----KDGDTGSKLYSIDLNGRNETLIN 432
           R + FS       +     + + +D +GRN T + 
Sbjct: 397 RQIWFSASGFVPGEDPYYKQWFRVDFDGRNLTRLT 431



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 73/216 (33%), Gaps = 28/216 (12%)

Query: 157 TISDDIYQSITGEKGDFNSR---ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
            +  ++ Q +  + GD   +   +LF +       I  SL       +   + T S+   
Sbjct: 242 KVQPEVVQQLYPKPGDAVDQEAPVLFRTADGQRTEIDPSLFASAYTLSAPEWRTDSKSFA 301

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN----G 269
             + +    Q ++     D            +      RI           +S +    G
Sbjct: 302 FNDLKRGFGQARIIAVDADTGQAHAAVTETAKTFVFRDRI-----------WSHDVKGLG 350

Query: 270 KRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINIS-ASYSPDSSQIVFESDR----- 322
           +  L + ++D    +Y +D  +     ++T   +I    A    D  QI F +       
Sbjct: 351 REILWTSERDGWRHLYLIDGATGRVIRQITKGNWIVRDIAKIDDDKRQIWFSASGFVPGE 410

Query: 323 -EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
               +Q + +  +G +  R++  KE +  +  ++P 
Sbjct: 411 DPYYKQWFRVDFDGRNLTRLT--KENATHEVRFAPD 444


>gi|312199732|ref|YP_004019793.1| Serine/threonine-protein kinase-like domain protein [Frankia sp.
           EuI1c]
 gi|311231068|gb|ADP83923.1| Serine/threonine-protein kinase-like domain protein [Frankia sp.
           EuI1c]
          Length = 739

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 78/215 (36%), Gaps = 21/215 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK---RIGNFRSMILAPRFSSNGKRALI 274
            +SP+ + +A       D   V+L D     AP+   R+    + + A  FS +G+    
Sbjct: 445 AYSPDGRTLA----SGGDDGTVHLWDVSRPGAPRDLGRVTGHTAAVDAVAFSRDGRTLA- 499

Query: 275 SVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           S  +D  + ++ V   S+A     LT       + ++SPD   +      +   +L+ + 
Sbjct: 500 SSGEDHTVRLWDVSQPSSARFLTALTADTGPVWALAFSPDRRTLA-TGSEDHTVRLWDVS 558

Query: 333 SNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           +  +  +      E +    V +S  G ++A     G      V         +L     
Sbjct: 559 NPAAPTELGGPLTEPNQVWSVTFSHDGHILATGNHDGHVRFYDVTNWQ--NPVMLSSPLA 616

Query: 392 LQAP----TWSPSGRSLIFSRKKDGDTGSKLYSID 422
              P     ++P+G  L  +     D   +L+ + 
Sbjct: 617 HTKPVLSAVFAPNGHILASAST---DHLVRLWDVS 648



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 56/173 (32%), Gaps = 16/173 (9%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFINISA 307
            K +      +    +S +G+    S   D  + ++ V          R+T       + 
Sbjct: 431 GKPLVGHTDRVEGVAYSPDGRTLA-SGGDDGTVHLWDVSRPGAPRDLGRVTGHTAAVDAV 489

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLIAFTK 365
           ++S D   +   S  +   +L+ +    S +    ++ D     +   +SP    +A   
Sbjct: 490 AFSRDGRTLA-SSGEDHTVRLWDVSQPSSARFLTALTADT-GPVWALAFSPDRRTLATGS 547

Query: 366 FSGEKFAIGVMKKD-----GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                    V         G     L E + + + T+S  G  ++ +   DG 
Sbjct: 548 EDHTVRLWDVSNPAAPTELGGP---LTEPNQVWSVTFSHDG-HILATGNHDGH 596



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 56/311 (18%), Positives = 95/311 (30%), Gaps = 48/311 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR +  G D   V   LWDV            +     R   HT + D        +   
Sbjct: 450 GRTLASGGDDGTVH--LWDVSRPG--------APRDLGRVTGHTAAVDAVAFSRDGR--- 496

Query: 174 NSRILFVSESVVSGIIKNSLC-VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                  + +         L  V     A       +    ++   FSP+++ +A  + D
Sbjct: 497 -------TLASSGEDHTVRLWDVSQPSSARFLTALTADTGPVWALAFSPDRRTLATGSED 549

Query: 233 DEDILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                 V L D     AP  +G      + + +  FS +G   L +   D  +  Y V  
Sbjct: 550 H----TVRLWDVSNPAAPTELGGPLTEPNQVWSVTFSHDG-HILATGNHDGHVRFYDV-T 603

Query: 290 QSNATERLTNTLF---INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                  L++ L      +SA ++P+   +   S     + L  +    +    I     
Sbjct: 604 NWQNPVMLSSPLAHTKPVLSAVFAPNGHILASAS----TDHLVRLWDVSNPAAPIPLGNP 659

Query: 347 ASYFDPVWS----PQGDLIAFTKFSGEKFAIGVMKKD-----GSQERLLVEDSNLQAPTW 397
               +  W+    P G  +A            V         GS   L+   + +    +
Sbjct: 660 LILPNEAWTVTFTPDGRTLAVGGADNAVRLWNVQDPTQPTPIGSP--LVGHSNTVTGVAF 717

Query: 398 SPSGRSLIFSR 408
           SP GR+L  S 
Sbjct: 718 SPDGRTLASSS 728


>gi|229081619|ref|ZP_04214114.1| TolB domain protein [Bacillus cereus Rock4-2]
 gi|228701623|gb|EEL54114.1| TolB domain protein [Bacillus cereus Rock4-2]
          Length = 382

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 75/223 (33%), Gaps = 55/223 (24%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           + + +  P++S + + +AY     ++IL +Y +     +  K++  F S     ++S   
Sbjct: 24  KGENITGPKWSHDGEWLAYVKGKKQNILELYRL-----KDGKKVTPFHSEASNYQWSPTE 78

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----SYSPDSSQIVFESDREG 324
                         + + D++        N  F N+SA     ++ PD    +  S+   
Sbjct: 79  NIIAFIFTG----TLNTFDVEKK------NADFENVSAGVGDYAWYPDGKNFLVSSEAHL 128

Query: 325 KEQLYVMQSNGSDQKRISQDKEAS---------------------YFDPVWSPQGDLIAF 363
               +     G+    + +D   +                          WSP    I+F
Sbjct: 129 LPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHDDFLALVASGFKWSPDQKWISF 184

Query: 364 -----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNLQAPT 396
                  +S +   + +++ DGS      + LL       AP+
Sbjct: 185 LAVPTASWSADSNTLCLVRADGSRFEKVDQMLLNAQWFQWAPS 227



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       +        +E+ L +  N+  P WS  G  L + + K      +LY
Sbjct: 2   KVAFIRHHNLWIKVE------GKEKQLTKGENITGPKWSHDGEWLAYVKGKK-QNILELY 54

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 55  RLK-DGKKVTPFHS--EASNYQWSP 76


>gi|195335374|ref|XP_002034341.1| GM21820 [Drosophila sechellia]
 gi|194126311|gb|EDW48354.1| GM21820 [Drosophila sechellia]
          Length = 353

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 75/210 (35%), Gaps = 18/210 (8%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G +I++        +   +FS   + +  ++ D      + L D    R  + +    + 
Sbjct: 44  GYSIKHSLLGHSGSVTGLKFSSCGENLVSSSADM----LLMLWDLSATRCIQSLAGHENG 99

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVF 318
           +    +S++G   + S   D+ + ++  D++S    + L        S  ++P S+ +  
Sbjct: 100 VNDVAWSADG--LIASCSDDKTVRLW--DVRSKLCVKVLEGHCGYTFSCCFNPQSNLLAS 155

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E + +          I +  +       +  +G++   + F G    + +   
Sbjct: 156 TSF---DETVRLWDVRTGKTLEIVRAHQDPITSVDFHREGNIFVTSSFDG---LVRLWDS 209

Query: 379 DGSQERLLVEDSNL---QAPTWSPSGRSLI 405
                   + D +        +SP+GR ++
Sbjct: 210 STGHVVKTLVDVDNIPVGHVKFSPNGRYIL 239


>gi|156554992|ref|XP_001602818.1| PREDICTED: similar to WD repeat domain 51B [Nasonia vitripennis]
          Length = 807

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 63/179 (35%), Gaps = 20/179 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +   +FSP+ + +A  + D      V + D   +   K     ++  L   F 
Sbjct: 540 FTGHTNWVRCAKFSPDGKLIASCSDDK----TVKIWDIASNTCIKTFTEMKASFLDVEFH 595

Query: 267 SNGKRALI-SVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDR-- 322
            NG    + +   D  + IY  DL++   ++  +        A + P+   ++  S    
Sbjct: 596 PNG--LAVGAANTDGCIKIY--DLKTGNLQQCYDAHEGPVNKARFHPNGKFMLTASQDYT 651

Query: 323 -------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                  EG+  +Y ++ + +    I+  K   YF    S +   +  + F   +  I 
Sbjct: 652 LKVLDLLEGRP-IYTLKGHANGVTAITFSKNGDYFASGSSDRQLFVWKSNFDKGERPIF 709


>gi|117919101|ref|YP_868293.1| dipeptidyl-peptidase IV [Shewanella sp. ANA-3]
 gi|117611433|gb|ABK46887.1| dipeptidyl-peptidase IV. Serine peptidase. MEROPS family S09B
           [Shewanella sp. ANA-3]
          Length = 763

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 88/303 (29%), Gaps = 93/303 (30%)

Query: 220 SPNQQKVAYA--TYDDEDILRVYLMDTRID-----------------------RAPKRIG 254
           SP+ Q+V Y     D+++   ++ MD +                         R  +RI 
Sbjct: 69  SPDGQRVTYLAGRKDNQNFYDLWQMDVKTGESSLLLNADKLASNELSDEEKARRERQRIY 128

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               M     ++ + K  LI    +    +Y   L  N+  +L         A  SP  +
Sbjct: 129 GEGIMEYF--WADDSKALLIPASGN----LYYFSLADNSVSQLPIGEGFATDARLSPKGN 182

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQG 358
            + F  D    + LYV+       + ++ D   +  + +                W+P  
Sbjct: 183 FVSFVRD----QNLYVLNLATKKLEAMTTDGGGAIKNAMAEFVAQEEMDRMTGYWWAPDE 238

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS---------------------------- 390
             IAFT+       +    +  +    L E                              
Sbjct: 239 SAIAFTRIDESGVELATRNEIYADGIKLTEQRYPAAGKNNVEIQLGVVTLKNKAINWVTL 298

Query: 391 ------NLQAPT--WSPSGRSLIF--SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                 ++  P   W P  + L F    +       +L ++D   + +TL+         
Sbjct: 299 SDDKNKDIYLPRVDWLPDSKHLSFQWQSRDQQKLDLQLVALDALTKPKTLVK----ERSD 354

Query: 441 QWV 443
            WV
Sbjct: 355 AWV 357



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 68/167 (40%), Gaps = 13/167 (7%)

Query: 202 NIRYLTPSRDQILFEPR--FSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRS 258
           N   L+  +++ ++ PR  + P+ + +++     D+  L + L+       PK +   RS
Sbjct: 294 NWVTLSDDKNKDIYLPRVDWLPDSKHLSFQWQSRDQQKLDLQLVALDALTKPKTLVKERS 353

Query: 259 -----MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                +     F       + + ++D    +Y  DL+     +LT   +      Y  ++
Sbjct: 354 DAWVNLNNDLHFLKQQSAFIWASERDGFNHLYLFDLKGKLKTQLTKGNWAVDELEYIDET 413

Query: 314 SQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +  V+ + R+       LY +   G   +R+S   EA   +PV++  
Sbjct: 414 AGWVYFTGRKDTPIEKHLYRVPLAGGKVERVS--SEAGMHNPVFADN 458



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/250 (11%), Positives = 73/250 (29%), Gaps = 58/250 (23%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R +T     +L   + +     +    Y  E       ++           + R + L 
Sbjct: 10  LRSVTLGASSLLIASQLAMVSSAIFTPAYALEGGTTPLTIERMNASPALAGTSPRGLKL- 68

Query: 263 PRFSSNGKRALISVQKDEA---MDIYSVDLQSNA-----------------------TER 296
              S +G+R      + +     D++ +D+++                           +
Sbjct: 69  ---SPDGQRVTYLAGRKDNQNFYDLWQMDVKTGESSLLLNADKLASNELSDEEKARRERQ 125

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                 I +   ++ DS  ++  +       LY      +   ++    E    D   SP
Sbjct: 126 RIYGEGI-MEYFWADDSKALLIPA----SGNLYYFSLADNSVSQL-PIGEGFATDARLSP 179

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQAPTWS 398
           +G+ ++F +       + V+     +   +  D                    +    W+
Sbjct: 180 KGNFVSFVRDQ----NLYVLNLATKKLEAMTTDGGGAIKNAMAEFVAQEEMDRMTGYWWA 235

Query: 399 PSGRSLIFSR 408
           P   ++ F+R
Sbjct: 236 PDESAIAFTR 245



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 41/311 (13%), Positives = 93/311 (29%), Gaps = 66/311 (21%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV----------MDRDGANI--- 203
           +++D+    +   +G      L    + VS +   +L V          M  DG      
Sbjct: 156 SLADNSVSQLPIGEGFATDARLSPKGNFVSFVRDQNLYVLNLATKKLEAMTTDGGGAIKN 215

Query: 204 ---RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI------------------------ 236
               ++       +    ++P++  +A+   D+  +                        
Sbjct: 216 AMAEFVAQEEMDRMTGYWWAPDESAIAFTRIDESGVELATRNEIYADGIKLTEQRYPAAG 275

Query: 237 -------LRVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALISVQKDEAMDIYSV 287
                  L V  +  +         +    I  PR  +  + K      Q   + D   +
Sbjct: 276 KNNVEIQLGVVTLKNKAINWVTLSDDKNKDIYLPRVDWLPDSKHLSFQWQ---SRDQQKL 332

Query: 288 DLQSNATERLTNTL-----------FINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           DLQ  A + LT               +N    +    S  ++ S+R+G   LY+    G 
Sbjct: 333 DLQLVALDALTKPKTLVKERSDAWVNLNNDLHFLKQQSAFIWASERDGFNHLYLFDLKGK 392

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQA 394
            + ++++   A             + FT          +  +   G +   +  ++ +  
Sbjct: 393 LKTQLTKGNWAVDELEYIDETAGWVYFTGRKDTPIEKHLYRVPLAGGKVERVSSEAGMHN 452

Query: 395 PTWSPSGRSLI 405
           P ++   +S+ 
Sbjct: 453 PVFA-DNQSVY 462


>gi|15921144|ref|NP_376813.1| tricorn protease [Sulfolobus tokodaii str. 7]
 gi|20140705|sp|Q973J1|TRIN_SULTO RecName: Full=Putative Tricorn-like protease N-terminal subunit
 gi|15621929|dbj|BAB65922.1| 195aa long hypothetical tricorn protease [Sulfolobus tokodaii str.
           7]
          Length = 195

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 66/188 (35%), Gaps = 30/188 (15%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I   +   L P     G     +   D    ++ + L+     R+T+   + I    SPD
Sbjct: 16  ISYMKGYYLHPDIR--GNLVAFTSDDD----VWLMTLEDMKPIRVTSGQGVAIRPKISPD 69

Query: 313 SSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--- 367
             +I +     R+GK    +  +   + KRI+     +     W    +++  T F    
Sbjct: 70  GKKIAYTIIWLRKGKGGGDIFITGNGETKRITFFGSMNTRVLGWLSDDEILVLTDFHTPF 129

Query: 368 ---GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR----------KKDGDT 414
               E + I +   DG+ E++     +  A +    G  ++ +R           K G  
Sbjct: 130 PQWSETYKINI--NDGTMEKIPFGPISNIAIS----GDIIVIARGYQDLPFWKGYKGGTK 183

Query: 415 GSKLYSID 422
           G  L S D
Sbjct: 184 GEFLISYD 191



 Score = 43.1 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 57/151 (37%), Gaps = 21/151 (13%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV----QK 278
              VA+ + DD     V+LM    D  P R+ + + + + P+ S +GK+   ++    + 
Sbjct: 30  GNLVAFTSDDD-----VWLMTLE-DMKPIRVTSGQGVAIRPKISPDGKKIAYTIIWLRKG 83

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQ---LYVMQSN 334
               DI+     +  T+R+T    +N     +  D   +V         Q    Y +  N
Sbjct: 84  KGGGDIFI--TGNGETKRITFFGSMNTRVLGWLSDDEILVLTDFHTPFPQWSETYKININ 141

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               ++I         +   S  GD+I   +
Sbjct: 142 DGTMEKI---PFGPISNIAIS--GDIIVIAR 167



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 4/99 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RF 265
             S   +   P+ SP+ +K+AY             +    +   KRI  F SM      +
Sbjct: 54  VTSGQGVAIRPKISPDGKKIAYTIIWLRKGKGGGDIFITGNGETKRITFFGSMNTRVLGW 113

Query: 266 SSNGKRAL---ISVQKDEAMDIYSVDLQSNATERLTNTL 301
            S+ +  +         +  + Y +++     E++    
Sbjct: 114 LSDDEILVLTDFHTPFPQWSETYKININDGTMEKIPFGP 152


>gi|330797188|ref|XP_003286644.1| hypothetical protein DICPUDRAFT_77529 [Dictyostelium purpureum]
 gi|325083392|gb|EGC36846.1| hypothetical protein DICPUDRAFT_77529 [Dictyostelium purpureum]
          Length = 531

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 72/236 (30%), Gaps = 28/236 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTP---------SRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +G  K    ++   G N    T            + ++    FS + + +A        I
Sbjct: 202 NGKEKGQDWLV---GYNPSVQTNLNIDLLHNLQHNSVVCCVNFSNDGKYLATGCNRSAQI 258

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             V           +   +    I +  FS +G     +  +D+ + ++  D+ S   + 
Sbjct: 259 YDVDSGKKIHSFVDESDKDGDLYIRSVCFSPDGNYLA-TGAEDKTVKVW--DIHSKKIQH 315

Query: 297 LTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----ASYFD 351
                 ++  S  YS D     F     G ++  +             ++E         
Sbjct: 316 TFYGHELDIYSLDYSSDGR---FIVSGSGDKKAKIWDIEKGKCAYTLGNEEVGPKNGVTS 372

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLI 405
              SP G L+A          + +         ER      ++ +  +SP G+SL 
Sbjct: 373 VAMSPDGRLVAAGSLDN---IVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLA 425



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 59/194 (30%), Gaps = 16/194 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+   +A    D      V + D    +           I +  +SS+G+  + S   
Sbjct: 287 FSPDGNYLATGAEDK----TVKVWDIHSKKIQHTFYGHELDIYSLDYSSDGRFIV-SGSG 341

Query: 279 DEAMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           D+   I+ ++ +      L N          S + SPD   +   S       + +  + 
Sbjct: 342 DKKAKIWDIE-KGKCAYTLGNEEVGPKNGVTSVAMSPDGRLVAAGSL---DNIVRLWDAQ 397

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ- 393
                   +    S +   +SP G  +A            +             + +   
Sbjct: 398 TGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDF 457

Query: 394 --APTWSPSGRSLI 405
             +  +SP G  LI
Sbjct: 458 VLSVAFSPDGNWLI 471



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 6/154 (3%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +G + N + + D                ++   FSP+ + +A  + D    L      
Sbjct: 382 VAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLWDLSGS 441

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R        +  +L+  FS +G    IS  KD ++  +  D ++  T  +      
Sbjct: 442 RSRSRCRATFNGHKDFVLSVAFSPDGNWL-ISGSKDRSVQFW--DPRNGTTHMMLQGHKN 498

Query: 304 NI-SASYSPD-SSQIVFESDREGKEQLYVMQSNG 335
           ++ S + SP  SS  VF +   G  +  + + + 
Sbjct: 499 SVISVALSPKLSSYGVFATG-SGDFRARLWKYDS 531


>gi|270294436|ref|ZP_06200638.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270275903|gb|EFA21763.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 737

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 84/251 (33%), Gaps = 56/251 (22%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++ ++   ++     + V            +  +  S      F+ +G + LI+ +    
Sbjct: 59  DRTQIIKYSFKTGKPVEVLFDAATARECTFKTFDSYS------FAPDGSKLLIATETTPI 112

Query: 282 MD--------IYSV--DLQSNA---TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                     IYS+  +L        E+L++         +SPD +Q+ F  D       
Sbjct: 113 YRHSYTAVHYIYSLKRNLDGKINNIVEKLSDG-GPQQVPVFSPDGNQVAFVRD---NNIF 168

Query: 329 YVMQSNGSDQKRISQDKEAS---YFDPVW--------------SPQGDLIAFTKFSGEKF 371
            V    G+ + ++++D + +      P W              S    ++AF +F  +  
Sbjct: 169 LVKLLYGNSESQVTEDGKQNEVLNGIPDWVYEEEFSFNRALEFSADSQMLAFIRFDEKDV 228

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS---LIFSRKKDGDTGSK--LYSIDLNGR 426
                                QAP ++P  +      +   K G+  SK  +++ D+  +
Sbjct: 229 PSYSFPL-----------FAGQAPHFTPFEKYPGEYTYKYPKTGEVNSKVSVHTFDIKSK 277

Query: 427 NETLINTPAYA 437
               IN P  A
Sbjct: 278 VTRKINVPVDA 288



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 45/143 (31%), Gaps = 28/143 (19%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--------AFTKFSGEKF 371
           S + GK    +  +     +  +     SY    ++P G  +         +        
Sbjct: 67  SFKTGKPVEVLFDAAT--ARECTFKTFDSY---SFAPDGSKLLIATETTPIYRHSYTAVH 121

Query: 372 AIGVM--KKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            I  +    DG    +   L +    Q P +SP G  + F R  +      LY     G 
Sbjct: 122 YIYSLKRNLDGKINNIVEKLSDGGPQQVPVFSPDGNQVAFVRDNNIFLVKLLY-----GN 176

Query: 427 NETLINTPAYASD-----PQWVG 444
           +E+ +      ++     P WV 
Sbjct: 177 SESQVTEDGKQNEVLNGIPDWVY 199



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 44/119 (36%), Gaps = 2/119 (1%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F S++ G   LY     G+  K+++  +        + P+     F+          + K
Sbjct: 357 FVSEKSGYNHLYWYSIGGNLLKQVTAGQYEVQEFLGYDPEEGSFYFSSNEESPMRSAIYK 416

Query: 378 KDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            D   ++  L   +   +  +S + +  + +R  + DT + +   D  G+    +   A
Sbjct: 417 IDRKGKKTRLSSQAGTNSAQFSANMKYYM-NRYSNLDTPTVITLNDNTGKTLATLMDNA 474


>gi|226479910|emb|CAX73251.1| Notchless protein homolog 1 [Schistosoma japonicum]
          Length = 368

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 69/191 (36%), Gaps = 19/191 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S     SL   + D   +         ++ + +FSPN + +A A++D      V + D 
Sbjct: 189 GSDDNTLSLWQPEVDKKPLSPRMTGHQGVVNDVKFSPNGRLLASASFDH----SVKIWDG 244

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +    +      +    +SS+  R ++S  KD  + ++S+        R  N   + 
Sbjct: 245 FTGQFLATMFGHVQDVYLVSWSSD-SRLVVSCSKDSTVKVWSI----GEVRRW-NQEALT 298

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIA 362
            S        + +F SD  GK++    +     +  +      S   +   WSP G  + 
Sbjct: 299 TSEE---QRKKQIFASDVAGKKRSNSSRVYQRKRHLLHDLPGHSDAVYALDWSPDGQYVV 355

Query: 363 FTKFSGEKFAI 373
               SG K  I
Sbjct: 356 ----SGGKDRI 362


>gi|160891140|ref|ZP_02072143.1| hypothetical protein BACUNI_03587 [Bacteroides uniformis ATCC 8492]
 gi|317481042|ref|ZP_07940121.1| dipeptidyl peptidase IV [Bacteroides sp. 4_1_36]
 gi|156859361|gb|EDO52792.1| hypothetical protein BACUNI_03587 [Bacteroides uniformis ATCC 8492]
 gi|316902755|gb|EFV24630.1| dipeptidyl peptidase IV [Bacteroides sp. 4_1_36]
          Length = 737

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 84/251 (33%), Gaps = 56/251 (22%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++ ++   ++     + V            +  +  S      F+ +G + LI+ +    
Sbjct: 59  DRTQIIKYSFKTGKPVEVLFDAATARECTFKTFDSYS------FAPDGSKLLIATETTPI 112

Query: 282 MD--------IYSV--DLQSNA---TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
                     IYS+  +L        E+L++         +SPD +Q+ F  D       
Sbjct: 113 YRHSYTAVHYIYSLKRNLDGKINNIVEKLSDG-GPQQVPVFSPDGNQVAFVRD---NNIF 168

Query: 329 YVMQSNGSDQKRISQDKEAS---YFDPVW--------------SPQGDLIAFTKFSGEKF 371
            V    G+ + ++++D + +      P W              S    ++AF +F  +  
Sbjct: 169 LVKLLYGNSESQVTEDGKQNEVLNGIPDWVYEEEFSFNRALEFSADSQMLAFIRFDEKDV 228

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS---LIFSRKKDGDTGSK--LYSIDLNGR 426
                                QAP ++P  +      +   K G+  SK  +++ D+  +
Sbjct: 229 PSYSFPL-----------FAGQAPHFTPFEKYPGEYTYKYPKTGEVNSKVSVHTFDIKSK 277

Query: 427 NETLINTPAYA 437
               IN P  A
Sbjct: 278 VTRKINVPVDA 288



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 45/143 (31%), Gaps = 28/143 (19%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--------AFTKFSGEKF 371
           S + GK    +  +     +  +     SY    ++P G  +         +        
Sbjct: 67  SFKTGKPVEVLFDAAT--ARECTFKTFDSY---SFAPDGSKLLIATETTPIYRHSYTAVH 121

Query: 372 AIGVM--KKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            I  +    DG    +   L +    Q P +SP G  + F R  +      LY     G 
Sbjct: 122 YIYSLKRNLDGKINNIVEKLSDGGPQQVPVFSPDGNQVAFVRDNNIFLVKLLY-----GN 176

Query: 427 NETLINTPAYASD-----PQWVG 444
           +E+ +      ++     P WV 
Sbjct: 177 SESQVTEDGKQNEVLNGIPDWVY 199



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 44/119 (36%), Gaps = 2/119 (1%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F S++ G   LY     G+  K+++  +        + P+     F+          + K
Sbjct: 357 FVSEKSGYNHLYWYSIGGNLLKQVTAGQYEVQEFLGYDPEEGSFYFSSNEESPMRSAIYK 416

Query: 378 KDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            D   ++  L   +   +  +S + +  + +R  + DT + +   D  G+    +   A
Sbjct: 417 IDRKGKKTRLSSQAGTNSAQFSANMKYYM-NRYSNLDTPTVITLNDNTGKTLATLMDNA 474


>gi|46447606|ref|YP_008971.1| hypothetical protein pc1972 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46401247|emb|CAF24696.1| hypothetical protein pc1972 [Candidatus Protochlamydia amoebophila
           UWE25]
          Length = 647

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 71/194 (36%), Gaps = 24/194 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---- 274
           FSPN ++V   + +      + L DT+  +  K  G          FS NG+R +     
Sbjct: 153 FSPNGRRVVVTSNE-----SISLWDTQTGKFLKNWGKGWEDRPNISFSPNGERIISSPWQ 207

Query: 275 ---SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S+ ++ + D++  + Q+    +       N+   +SP+S Q+   S       + + 
Sbjct: 208 VMNSLWQEGSCDLW--NAQTGEFLQTLEEKCCNV--YFSPNSEQLATIS----LTSIRLW 259

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            +      +      +      +S     I     S +  ++ +      +    +E+  
Sbjct: 260 DAQTGKCLQFLGYNPSLNESISFSSDSQRII----SNDGTSVCLWDAQTGKCLQSLENIT 315

Query: 392 LQAPTWSPSGRSLI 405
           L   ++SP+ + L 
Sbjct: 316 LLTTSFSPNSQQLA 329


>gi|313207203|ref|YP_004046380.1| peptidase s9b dipeptidylpeptidase iv domain protein [Riemerella
           anatipestifer DSM 15868]
 gi|312446519|gb|ADQ82874.1| peptidase S9B dipeptidylpeptidase IV domain protein [Riemerella
           anatipestifer DSM 15868]
 gi|315022395|gb|EFT35422.1| Dipeptidyl peptidase IV [Riemerella anatipestifer RA-YM]
 gi|325335358|gb|ADZ11632.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Riemerella
           anatipestifer RA-GD]
          Length = 710

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 53/173 (30%), Gaps = 33/173 (19%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-----SSNGKRALI--- 274
            + +A  +    D     +  T I +   +       I+  R+     S++G++ L+   
Sbjct: 35  GKGIAGISPLKTDDYYAVIEPTGIAKYSYKTLQKEGYIVEGRYEDYQLSNDGQKILLQKV 94

Query: 275 ---SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                +          DL S     L     +    ++SPD S++ F S+      LY  
Sbjct: 95  SEPIYRHSFLGVFDVKDLSSGKIISLFEGKPVQ-EPTFSPDGSKVAFISE----NNLYYQ 149

Query: 332 QSNGSDQKRISQDK-----------------EASYFDPVWSPQGDLIAFTKFS 367
                   +I+ D                         VW+  GD I F +  
Sbjct: 150 DLASGQVVQITTDGKKNEILNGLADWVYEEEFGHAKQYVWNSGGDAIVFVRSD 202



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 34/111 (30%), Gaps = 19/111 (17%)

Query: 346 EASYFDPVWSPQGDLI--------AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           E  Y D   S  G  I         +       F   V      +   L E   +Q PT+
Sbjct: 74  EGRYEDYQLSNDGQKILLQKVSEPIYRHSFLGVFD--VKDLSSGKIISLFEGKPVQEPTF 131

Query: 398 SPSGRSLIFSR----KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           SP G  + F              ++  I  +G+   ++N  A      WV 
Sbjct: 132 SPDGSKVAFISENNLYYQDLASGQVVQITTDGKKNEILNGLAD-----WVY 177



 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 62/172 (36%), Gaps = 11/172 (6%)

Query: 272 ALISVQKDEA-MDIYSVDLQSNATERL---TNTLFINISA---SYSPDSSQIVFESDREG 324
            + +  + +  +DI  +   +   E+L   T+  +I        +  D   +++ S+R+G
Sbjct: 275 LVATANRHQNKLDILKLKTSNGKVEKLFTETDKAWIETDNLTLEFLSDGG-MLWASERDG 333

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQ 382
              LY   + G  +K++++          +  +   +             +  +  +  +
Sbjct: 334 YRHLYWYDAKGKLKKQVTKGNWEITDYYGFDAKNQEVFVQTTQNGSINKVVSKININTGK 393

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            +++ +       ++SP+    I +      T  K    D NG++   I   
Sbjct: 394 SQIVSDIEGNNTASFSPNFNYFI-NTTSSAKTPHKYVLRDRNGKSLKEIQNN 444



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 46/277 (16%), Positives = 90/277 (32%), Gaps = 48/277 (17%)

Query: 188 IIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYAT---YDDEDILRVYLMD 243
              + L V D  D ++ + ++    + + EP FSP+  KVA+ +      +D+    ++ 
Sbjct: 99  YRHSFLGVFDVKDLSSGKIISLFEGKPVQEPTFSPDGSKVAFISENNLYYQDLASGQVVQ 158

Query: 244 TRIDRAPKRIGNF---------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              D     I N                  ++S G   +     + A+   ++ +  N  
Sbjct: 159 ITTDGKKNEILNGLADWVYEEEFGHAKQYVWNSGGDAIVFVRSDETAVPEMNMPIYGNNL 218

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQ----LYVMQSNGSDQKRISQDKEASYF 350
                         Y  D     F+  + G++     L+  Q       ++      +Y+
Sbjct: 219 --------------YPQDFK---FKYPKAGEKNSEVSLHYYQLATKKIAKVDLGVFENYY 261

Query: 351 DPVW----SPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPT------WSP 399
            P           L+A       K  I  +K   G  E+L  E       T      +  
Sbjct: 262 IPQLFVSKVSDEVLVATANRHQNKLDILKLKTSNGKVEKLFTETDKAWIETDNLTLEFLS 321

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            G  L ++ ++DG     LY  D  G+ +  +    +
Sbjct: 322 DGGML-WASERDGYR--HLYWYDAKGKLKKQVTKGNW 355


>gi|126331919|ref|XP_001364048.1| PREDICTED: similar to WD repeat domain 1 isoform 1 [Monodelphis
           domestica]
          Length = 606

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 61/385 (15%), Positives = 119/385 (30%), Gaps = 70/385 (18%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVIIRNIDNPAIADIYTE----HAHQVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 65  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIA--------------- 109

Query: 171 GDFNSRILFVSESVVSGIIKNSLC-----VMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
              +S+ + V            L      V +  G N   +  S D     P        
Sbjct: 110 WTEDSKRIAVVGEGREKFGAVFLWDTGSSVGEVTGHN--KVINSVDIKQTRP-------- 159

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             Y      D       +    +    IG+    +   RFS +G +   +   D    IY
Sbjct: 160 --YRLATASDDNCAAFFEGPPFKFKFTIGDHSRFVNCVRFSPDGNKFA-TASADG--QIY 214

Query: 286 SVDLQSNATE-RLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             D ++      L  +   +      S+SPDSS ++  S   G +   V    G++    
Sbjct: 215 IYDGKTGEKVCALGGSKAHDGGIYAISWSPDSSHLLSAS---GDKTAKVWDV-GANSVVN 270

Query: 342 SQDKEASYFD----PVWSPQ-------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           + +   +  D     +W             I +   +     + V+K      + L    
Sbjct: 271 TFNMGPNVLDQQLGCLWQKDHLISVSLSGYINYLDKNNPNKPLRVIKGHSKSIQCLTVHK 330

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTG 415
           N         G+S I+S   DG   
Sbjct: 331 N--------DGKSYIYSGSHDGHIN 347



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 46/129 (35%), Gaps = 7/129 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDR 322
               +G  A +    D  + +YS+   +    E+L          +YS D + +    D 
Sbjct: 452 AVHPSGGTAAVGG-ADGNVRLYSIQGTTLKHEEKLLEAKGPVTDLAYSHDGAFLAVC-DA 509

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                ++ + ++G  +  +     A      WSP  +  A     G    + V      +
Sbjct: 510 SKVVTVFSV-ADGYSEYNVFYGHHAKIVCIAWSPDNEHFA---SGGMDMMVYVWTLSDPE 565

Query: 383 ERLLVEDSN 391
            R+ ++D++
Sbjct: 566 TRVKIQDAH 574


>gi|456327|emb|CAA82932.1| basic protein (putative) [Clostridium pasteurianum]
          Length = 461

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 116/313 (37%), Gaps = 43/313 (13%)

Query: 124 LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
             V ++L  V ++     K    S     K  +  S+ I   I  E  ++    ++ ++S
Sbjct: 113 YTVSYKLL-VNNKSNNTEKVSIKSENLIDKAGNLPSNIINGGIISESNNW----IYYNDS 167

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                    L  M  DG+++  +       +   R       + Y    D +   +Y + 
Sbjct: 168 DG-------LYKMRSDGSSVINICNDNANYINVVR-----DYIYYVNVSDGN--SIYKIK 213

Query: 244 TRIDRAPKRIGNF-RSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNT 300
                  + +  + +S+ +       G       S +      +Y +        +L + 
Sbjct: 214 NDGTSRERILSTYAKSINIL------GDWIYYCKSTENGLNFRLYKIKKDGTNNVKLIDD 267

Query: 301 LFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             I+ + +    ++ + +  + ++G E LY  + +GS Q ++  + +    +     + +
Sbjct: 268 SIIDGNFTIV--NNLMYYKINSQDGGESLYSSKLDGSQQHKLCDNVDQFNIN-----EKN 320

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +  +T  +     +  +  DGS +  L +D  + +   S     + ++  +       LY
Sbjct: 321 IYYYTSINNSG--LFKINLDGSNKVKLSDDV-IDSINMSKDN--IYYTVDQH--INKILY 373

Query: 420 SIDLNGRNETLIN 432
           SIDLNG+N+  ++
Sbjct: 374 SIDLNGKNKIKLS 386


>gi|322490118|emb|CBZ25379.1| conserved hypothetical protein [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 698

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/221 (17%), Positives = 79/221 (35%), Gaps = 26/221 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP +   A  + +D     + L +  +             I++  FS +GK    +  
Sbjct: 411 ALSPAETDFASCSNED---ASITLSNFAVGSEVGIFTGHHDTIISATFSPDGKYLA-TAS 466

Query: 278 KDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           KDE M ++ V   +     LT     + I   + PDS  +V       ++++  +     
Sbjct: 467 KDETMILWDV---TTTKILLTFAHPKVVICCCFGPDSKHLV----SGCQDRVCRLWDTKR 519

Query: 337 DQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQ 393
            ++ +S  + E       +SP G+ +           + V     ++ R  LL     + 
Sbjct: 520 GREWMSYTEHEGIIIAIAFSPDGNYLCSASADRS---LRVWSATTAKTRFHLLGHVGIIL 576

Query: 394 APTWSPSGRSLI--------FSRKKDGDTGSKLYSIDLNGR 426
           + +++  G+ +I            +DG     L  +D+ G 
Sbjct: 577 SCSYTSDGQHIISNDESLLRVWSAEDGSCKLSLSPVDVAGT 617



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 53/158 (33%), Gaps = 12/158 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +    FSP+ + +A A+ D+     + L D    +          +++   F
Sbjct: 442 IFTGHHDTIISATFSPDGKYLATASKDE----TMILWDVTTTKILLTFA-HPKVVICCCF 496

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREG 324
             + K  + S  +D    ++    +       T    I I+ ++SPD + +   S DR  
Sbjct: 497 GPDSKHLV-SGCQDRVCRLWDT-KRGREWMSYTEHEGIIIAIAFSPDGNYLCSASADRS- 553

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              L V  +  +  +              ++  G  I 
Sbjct: 554 ---LRVWSATTAKTRFHLLGHVGIILSCSYTSDGQHII 588



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 69/194 (35%), Gaps = 21/194 (10%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L DT+  R          +I+A  FS +G     S   D ++ ++S          L   
Sbjct: 514 LWDTKRGREWMSYTEHEGIIIAIAFSPDGNYLC-SASADRSLRVWSATTA-KTRFHLLGH 571

Query: 301 LFINISASYSPDSSQIVFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           + I +S SY+ D   I+          S  +G  +L +   + +   + +       +  
Sbjct: 572 VGIILSCSYTSDGQHIISNDESLLRVWSAEDGSCKLSLSPVDVAGTLQPNHRAAKLGWTL 631

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW---SPSGRSLIFSRK 409
             +  G    F   +     + V+  +  +E   V  +  +AP +   + S   + F   
Sbjct: 632 SSAAPGSFTRFVLVACNNRFVYVIDIETGRE---VASTFCKAPVYCLTAGSHEKMAF--- 685

Query: 410 KDGDTGSKLYSIDL 423
             GD+   +Y + L
Sbjct: 686 --GDSFGNIYVLRL 697


>gi|213403902|ref|XP_002172723.1| WD repeat-containing protein [Schizosaccharomyces japonicus yFS275]
 gi|212000770|gb|EEB06430.1| WD repeat-containing protein [Schizosaccharomyces japonicus yFS275]
          Length = 518

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 51/149 (34%), Gaps = 9/149 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +S NG+  + S  +D    +Y V   +    RL         A +SPD   I+  SD  
Sbjct: 220 SYSHNGRYLV-SASRDRTAVVYDV-TATTVLHRLLGHDNEVAYAQWSPDDDYILTCSD-- 275

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             +++ +  ++   + R+ Q          W P G                +   DG+  
Sbjct: 276 -DKKVILWNAHTGARVRVFQKHSEPVSCCRWLPDGQSFVTGSLDCSIIHWAL---DGTIL 331

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
                D N+     +P G+ L     K G
Sbjct: 332 HRW-RDLNIYDMDITPDGKRLFVVGVKQG 359



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 71/209 (33%), Gaps = 23/209 (11%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS     +  V D     + +     D  +   ++SP+   +   + D +    V L + 
Sbjct: 229 VSASRDRTAVVYDVTATTVLHRLLGHDNEVAYAQWSPDDDYILTCSDDKK----VILWNA 284

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +        +   R+  +G+   ++   D ++  +++D       R  +    +
Sbjct: 285 HTGARVRVFQKHSEPVSCCRWLPDGQS-FVTGSLDCSIIHWALD--GTILHRWRDLNIYD 341

Query: 305 ISASYSPDSSQIVFESDREG---KEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDL 360
           +    +PD  ++     ++G   ++ L V         KRI+ + +A+      S     
Sbjct: 342 MD--ITPDGKRLFVVGVKQGLSTEKHLSVYHMETRQCLKRITLEAKATSVC--VSKDSKY 397

Query: 361 IAFTKFSGEKFAIG-------VMKKDGSQ 382
            A T    +   +        V   DGSQ
Sbjct: 398 -ALTNTEPQTVLLWDLEDYRIVQHYDGSQ 425


>gi|195330209|ref|XP_002031797.1| GM23851 [Drosophila sechellia]
 gi|194120740|gb|EDW42783.1| GM23851 [Drosophila sechellia]
          Length = 332

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 225 KVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           K    T   +D+++V+ L +    +   ++      +++   SS+G+    S   D  M 
Sbjct: 53  KDFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIA-SSSLDSTMC 111

Query: 284 IYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++  D +S   + L N   ++  +  +SP +  ++     +GK  + +        ++  
Sbjct: 112 LW--DARSGHKKHLLNFGPVDLWTVQFSPCNKYVI-SGLNDGK--ISMYNVETGRAEQTL 166

Query: 343 QDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSP 399
             +   Y     +SP G  IA     G    I +      +    +E   +   +  +SP
Sbjct: 167 DAQNGKYTLSIAYSPDGKYIASGAIDG---IITIFDVAAGKVVQTLEGHAMPVRSLCFSP 223

Query: 400 SGRSLIFSRKKDGDTGSKLYSI 421
           +   L+ +     D   KLY +
Sbjct: 224 NSDLLLTASD---DGHMKLYDV 242



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 64/185 (34%), Gaps = 20/185 (10%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   + L     +      +SP+ + +A    D      + + D    +  + +      
Sbjct: 160 GRAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDG----IITIFDVAAGKVVQTLEGHAMP 215

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQI 316
           + +  FS N    L++   D  M +Y V   D+       L+      +  ++S D    
Sbjct: 216 VRSLCFSPN-SDLLLTASDDGHMKLYDVTHSDVVGT----LSGHASWVLCVAFSEDGKHF 270

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIG 374
              S  +   +++    + S++K +    E +   +   +SP  D +A +    +   I 
Sbjct: 271 A-SSSSDNSVKIW----DTSERKCLHTFAEHTDQVWGVRYSPGNDKVA-SASEDKSLNIY 324

Query: 375 VMKKD 379
               +
Sbjct: 325 YCPPN 329


>gi|145345045|ref|XP_001417034.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577260|gb|ABO95327.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 364

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/161 (11%), Positives = 47/161 (29%), Gaps = 11/161 (6%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            D  ++   +S +  +    +   +D   +     R     + +G     +    FS++G
Sbjct: 33  HDAPVYAVAWSNDGAEATVVSGGGDDKGYLR----RGAGEARELGGHGESVSCAAFSADG 88

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQL 328
                         +   D ++ A ER        I   ++ P     +  S+       
Sbjct: 89  GLLA---TGGLDGKVCIYDGKTGAVERALEGPGGGIEWVAWHPRGRVTLAGSE---DFTA 142

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           ++   +     ++            ++P G  +    + G 
Sbjct: 143 WMWNGDDGALMQVFSGHSERVSCGGFTPDGKQVVTGSYDGS 183


>gi|114646150|ref|XP_001166187.1| PREDICTED: WD repeat domain 51B isoform 3 [Pan troglodytes]
          Length = 478

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 84/226 (37%), Gaps = 10/226 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +      L + +       Y       ++   +FSP+   +A A+ D    +R+++ D R
Sbjct: 35  TASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRD--RTVRLWIPDKR 92

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +  +       + +  FS++G+    +  +D+++ ++S+  Q      L        
Sbjct: 93  GKFSEFKAHTAP--VRSVDFSADGQFLA-TASEDKSIKVWSMYRQ-RFLYSLYRHTHWVR 148

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A +SPD   IV  S+    + + +  +          D         ++P G  IA + 
Sbjct: 149 CAKFSPDGRLIVSCSE---DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIA-SA 204

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            S +   +  ++ +   +   V    +   ++ PSG  LI +    
Sbjct: 205 GSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDG 250



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 56/151 (37%), Gaps = 6/151 (3%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             ++ I +   S NGK+   +   D  + +++    + A   +     +  S  +SP  +
Sbjct: 16  GHKAAITSLDLSPNGKQLA-TASWDTFLMLWNFKPHARAYRYV-GHKDVVTSVQFSPHGN 73

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S R+   +L++    G   +   +   A      +S  G  +A T    +   + 
Sbjct: 74  LLASAS-RDRTVRLWIPDKRGKFSE--FKAHTAPVRSVDFSADGQFLA-TASEDKSIKVW 129

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            M +      L      ++   +SP GR ++
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 95/302 (31%), Gaps = 45/302 (14%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           WD      ++   F     ++R + H   D +        G            + S    
Sbjct: 38  WDTF----LMLWNFKPHARAYRYVGHK--DVVTSVQFSPHG----------NLLASASRD 81

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            ++ +   D         +    +    FS + Q +A A+ D      + +      R  
Sbjct: 82  RTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDK----SIKVWSMYRQRFL 137

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-- 308
             +      +   +FS +G R ++S  +D+ + I+     +   ++  N    ++  +  
Sbjct: 138 YSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIW----DTTN-KQCVNNFSDSVGFANF 191

Query: 309 --YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             ++P  + I         + + V     +   +  Q          + P G+ +     
Sbjct: 192 VDFNPSGTCIA---SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASS 248

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSID 422
            G    + ++     + RL+        P    ++S  G   +F+     DT   L+  +
Sbjct: 249 DGTLKILDLL-----EGRLIYTLQGHTGPVFTVSFSKGGE--LFASG-GADTQVLLWRTN 300

Query: 423 LN 424
            +
Sbjct: 301 FD 302


>gi|26665869|ref|NP_758440.1| POC1 centriolar protein homolog B isoform a [Homo sapiens]
 gi|74762610|sp|Q8TC44|POC1B_HUMAN RecName: Full=POC1 centriolar protein homolog B; AltName: Full=WD
           repeat-containing protein 51B
 gi|19913466|gb|AAH26080.1| WD repeat domain 51B [Homo sapiens]
 gi|22760436|dbj|BAC11198.1| unnamed protein product [Homo sapiens]
 gi|117574250|gb|ABK41109.1| CDW9/WDR51B [Homo sapiens]
 gi|119617832|gb|EAW97426.1| WD repeat domain 51B, isoform CRA_b [Homo sapiens]
 gi|312150578|gb|ADQ31801.1| WD repeat domain 51B [synthetic construct]
          Length = 478

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 84/226 (37%), Gaps = 10/226 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +      L + +       Y       ++   +FSP+   +A A+ D    +R+++ D R
Sbjct: 35  TASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFSPHGNLLASASRD--RTVRLWIPDKR 92

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +  +       + +  FS++G+    +  +D+++ ++S+  Q      L        
Sbjct: 93  GKFSEFKAHTAP--VRSVDFSADGQFLA-TASEDKSIKVWSMYRQ-RFLYSLYRHTHWVR 148

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A +SPD   IV  S+    + + +  +          D         ++P G  IA + 
Sbjct: 149 CAKFSPDGRLIVSCSE---DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIA-SA 204

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            S +   +  ++ +   +   V    +   ++ PSG  LI +    
Sbjct: 205 GSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDG 250



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 56/151 (37%), Gaps = 6/151 (3%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             ++ I +   S NGK+   +   D  + +++    + A   +     +  S  +SP  +
Sbjct: 16  GHKAAITSLDLSPNGKQLA-TASWDTFLMLWNFKPHARAYRYV-GHKDVVTSVQFSPHGN 73

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S R+   +L++    G   +   +   A      +S  G  +A T    +   + 
Sbjct: 74  LLASAS-RDRTVRLWIPDKRGKFSE--FKAHTAPVRSVDFSADGQFLA-TASEDKSIKVW 129

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            M +      L      ++   +SP GR ++
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 95/302 (31%), Gaps = 45/302 (14%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           WD      ++   F     ++R + H   D +        G            + S    
Sbjct: 38  WDTF----LMLWNFKPHARAYRYVGHK--DVVTSVQFSPHG----------NLLASASRD 81

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            ++ +   D         +    +    FS + Q +A A+ D      + +      R  
Sbjct: 82  RTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDK----SIKVWSMYRQRFL 137

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-- 308
             +      +   +FS +G R ++S  +D+ + I+     +   ++  N    ++  +  
Sbjct: 138 YSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIW----DTTN-KQCVNNFSDSVGFANF 191

Query: 309 --YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             ++P  + I         + + V     +   +  Q          + P G+ +     
Sbjct: 192 VDFNPSGTCIA---SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASS 248

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSID 422
            G    + ++     + RL+        P    ++S  G   +F+     DT   L+  +
Sbjct: 249 DGTLKILDLL-----EGRLIYTLQGHTGPVFTVSFSKGGE--LFASG-GADTQVLLWRTN 300

Query: 423 LN 424
            +
Sbjct: 301 FD 302


>gi|46203704|ref|ZP_00051121.2| COG3391: Uncharacterized conserved protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 364

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 76/218 (34%), Gaps = 15/218 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+ ++V + +   ED + +    T  +     + N   M +   FS +G+   +    
Sbjct: 16  FTPDGREV-WVSVRGEDYVAILDAGTGKETGRITVPNGPGMTI---FSPDGRYGYVCSS- 70

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             + +  ++D++S     R+          + +PD  Q+ F     G+ Q++        
Sbjct: 71  -FSPETVAIDVKSREIVGRIKQESPFCPDIAATPDGKQVWFTLKDVGRVQVFEATPPFKV 129

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            K I      ++ +   +  G   A+    G    + V + D   +   +    L    W
Sbjct: 130 LKTIETGPITNHVNIARTKAGQF-AYVTI-GGLNQVKVFRTDDFSQVATIPTGALPHGLW 187

Query: 398 -SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            S  G  +        +    +  ID  G N  +   P
Sbjct: 188 PSGDGSRIY----VGLENADAVAVID-TGSNAVIATIP 220


>gi|296410768|ref|XP_002835107.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295627882|emb|CAZ79228.1| unnamed protein product [Tuber melanosporum]
          Length = 835

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 68/192 (35%), Gaps = 18/192 (9%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG--DFNSRILFVSESV-----VS 186
             + Q+    + ++  S         D     ++  +   D    + FV  S       +
Sbjct: 238 VKQNQLSKCLYHNTANSPSLYTDHHCDRNQFPLSTVEILTDHKDEVWFVQFSNDGTRLAT 297

Query: 187 GIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           G    ++ V D  D   I +L      I +  R+SP+  K+   + D     +  L DT 
Sbjct: 298 GSKDFTVIVWDLEDFQPIHHLKDHTGAITYL-RWSPDDSKLLSCSQDK----QAKLWDTT 352

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + +      + +  ++ +G+   ++   D+ M ++  +L   +    T     ++
Sbjct: 353 TGGCIRTMSAHTDWVSSCAWAPDGQT-FVTGSVDKEMILW--NLYGESIHTWTGARVYDL 409

Query: 306 SASYSPDSSQIV 317
               + D +++ 
Sbjct: 410 --VVTADGARLA 419



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 41/122 (33%), Gaps = 5/122 (4%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              + + + +  +   +FS++G R   +  KD  + ++ ++        L +        
Sbjct: 271 STVEILTDHKDEVWFVQFSNDGTRLA-TGSKDFTVIVWDLE-DFQPIHHLKDHTGAITYL 328

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD S+++  S     +Q  +  +      R             W+P G         
Sbjct: 329 RWSPDDSKLLSCSQ---DKQAKLWDTTTGGCIRTMSAHTDWVSSCAWAPDGQTFVTGSVD 385

Query: 368 GE 369
            E
Sbjct: 386 KE 387



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 21/145 (14%), Positives = 42/145 (28%), Gaps = 6/145 (4%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S+  D   D     L +   E LT+         +S D +++   S       + V    
Sbjct: 256 SLYTDHHCDRNQFPLST--VEILTDHKDEVWFVQFSNDGTRLATGSK---DFTVIVWDLE 310

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                   +D   +     WSP    +       ++  +      G    +      + +
Sbjct: 311 DFQPIHHLKDHTGAITYLRWSPDDSKLLSCSQD-KQAKLWDTTTGGCIRTMSAHTDWVSS 369

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLY 419
             W+P G++ +            LY
Sbjct: 370 CAWAPDGQTFVTGSVDKEMILWNLY 394


>gi|255584820|ref|XP_002533127.1| WD-repeat protein, putative [Ricinus communis]
 gi|223527071|gb|EEF29254.1| WD-repeat protein, putative [Ricinus communis]
          Length = 611

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 82/267 (30%), Gaps = 60/267 (22%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    + Y      +   V +++          G+        R+S NG+    S     
Sbjct: 26  PKSNSILYT-----NNRSVLILNLDNPLDVSVYGDHGYQATVARYSPNGEWIA-SADVSG 79

Query: 281 AMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQS--- 333
            + I+    D       ++ +    ++   +SPD  +IV   D +GK   + ++  S   
Sbjct: 80  TVRIWGAYNDHVLKKEFKVLSGRIDDLQ--WSPDGLRIVACGDGKGKSLVRAFMWDSGTN 137

Query: 334 ----NGSDQKRIS----------------------------------QDKEASYFDPVWS 355
               +G  ++ +S                                  +D         +S
Sbjct: 138 VGEFDGHSRRVLSCGFKPTRPFRIVTCGEDFLVNFYEGPPFKFKLSRRDHSNFVNCVRYS 197

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAPTWSPSGRSLIFSRKKD 411
           P G    F   S +K  I    K G +   L        ++ A +WSP G+ ++ +    
Sbjct: 198 PDGSK--FISVSSDKKGILFDGKTGEKIGELSSGDGHKGSIYAVSWSPDGKQVLTASADK 255

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYAS 438
                ++   D NG+ +  +       
Sbjct: 256 SAKVWEICD-DGNGKLKKTLTCSGSGG 281



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 12/112 (10%)

Query: 198 RDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            +G   ++    RD   F    R+SP+  K    + D + I    L D +       + +
Sbjct: 173 YEGPPFKFKLSRRDHSNFVNCVRYSPDGSKFISVSSDKKGI----LFDGKTGEKIGELSS 228

Query: 256 ---FRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLF 302
               +  I A  +S +GK+ L +   D++  ++ +  D      + LT +  
Sbjct: 229 GDGHKGSIYAVSWSPDGKQVL-TASADKSAKVWEICDDGNGKLKKTLTCSGS 279



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 11/129 (8%)

Query: 298 TNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           T  L   ++AS  +PD S+      ++GK  +Y +  +   ++ + +    +     +SP
Sbjct: 443 TIDLGFAVTASAVAPDGSE-AIIGGQDGKLHIYSVMGDTLKEEAVLEKHRGAVSVIRYSP 501

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
              +  F      + AI V  +   + +L   L   + +    WSP    +        D
Sbjct: 502 D--VSMFASGDANREAI-VWDRVSREVKLKNMLYHTARINCLAWSPDSSMVATGSL---D 555

Query: 414 TGSKLYSID 422
           T   +Y +D
Sbjct: 556 TCVIIYEVD 564


>gi|193216188|ref|YP_001997387.1| WD40 domain-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193089665|gb|ACF14940.1| WD-40 repeat protein [Chloroherpeton thalassium ATCC 35110]
          Length = 330

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 10/169 (5%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-FRSM 259
           A +          +    FSP+ + +A A+ D+     V + + +  +  + I    R  
Sbjct: 27  ATLVQTFTGHVAGIRSIAFSPDGKFIASASADN----TVRIWNVKEMKIERSIWKAHRLP 82

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +    FS +GK    S   D+ + I+ +  +  A + L          +YSPD   +V  
Sbjct: 83  VTVVAFSPDGKYVA-SGSDDKTIKIWDIS-KGVAVKELKGHRTGIRGLAYSPDGKHLV-S 139

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SD +    L+V       +          +F   ++  G+L+A      
Sbjct: 140 SDFD--PTLHVWSIETGKEILKKPAHALPFFSIDFNHSGNLMATASMDN 186



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/253 (16%), Positives = 88/253 (34%), Gaps = 59/253 (23%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + VA  + D      + + D     A K +   R+ I    +S +GK  + S  
Sbjct: 87  AFSPDGKYVASGSDDK----TIKIWDISKGVAVKELKGHRTGIRGLAYSPDGKHLV-SSD 141

Query: 278 KDEAMDIYSV---------------------DLQSN--------------ATERLT---- 298
            D  + ++S+                     +   N                + LT    
Sbjct: 142 FDPTLHVWSIETGKEILKKPAHALPFFSIDFNHSGNLMATASMDNLINLWNAKDLTLIRS 201

Query: 299 --NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-------QKRISQDKEASY 349
                 I   A +S +S+ +   S R+   +++ + S  S         ++++    + Y
Sbjct: 202 YGGHSDIVFQAKFSKNSTLLASCS-RDSTVKIWEVDSTASSTSSYLRTPEKLTFKGHSDY 260

Query: 350 F-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                + P  DL+A +  + +   +  + ++   + L    +++Q+  +S  G+ L    
Sbjct: 261 VLTVAFHPNNDLVA-SGSADKTVKLWSISENKEVQTLTGHTASVQSIAFSGDGKYLA--- 316

Query: 409 KKDGDTGSKLYSI 421
               D    L+ I
Sbjct: 317 TAGSDHNIMLWRI 329


>gi|118385217|ref|XP_001025746.1| hypothetical protein TTHERM_00930820 [Tetrahymena thermophila]
 gi|89307513|gb|EAS05501.1| hypothetical protein TTHERM_00930820 [Tetrahymena thermophila SB210]
          Length = 2136

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 65/173 (37%), Gaps = 15/173 (8%)

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            D++ + +Y          K+I  F       +FS +GK     +++D  + I++ + Q  
Sbjct: 1397 DKNTINIYNKINENYSLVKQITEFEKETHLAQFSPDGKFLATVLKRDSEIYIWNAENQFE 1456

Query: 293  ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              + +    +     ++S D+  +   S + G+ +++ +     + K + Q    S    
Sbjct: 1457 MVKNIREHRYFITCIAFSSDNKYLASAS-KSGEVEIWDINDKFKEFKYVFQKFYVS--AI 1513

Query: 353  VWSPQGDLIA--FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
             +S           + +   + I ++              N++   +SP+G+ 
Sbjct: 1514 AFSDDMQSFICCTKRLTCNIYDISIVG----------HTDNVRVVAFSPNGKY 1556



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 98/285 (34%), Gaps = 25/285 (8%)

Query: 163  YQSITGEKGDFNSRILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            ++  T  +  F       S +     +G     +  ++    N   +    D       F
Sbjct: 1660 FELATQIENKFYFHSAVFSRNGKYLATGTKNCQVWNVE---KNFEQIIEVNDNWNQCIAF 1716

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            S + + +A      ED     L   +  +    +  F   + +  FS++G+      + D
Sbjct: 1717 SADSKYIA---AGSEDNNCKILNAQKNFQVTHILEGFNCHVTSIDFSADGRYLATCSRDD 1773

Query: 280  EAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +   I+S+ L++ +  + T     +      ++S DS  +   S++     L+ MQ+   
Sbjct: 1774 KDCKIWSI-LENFSLIQ-TFKPNKDKRVFQVAFSADSQYLATASEK--NCLLWSMQNRFE 1829

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAP 395
               + +Q          +SP    +A    + +   I   + + S  + + +    + + 
Sbjct: 1830 AISQ-TQSHSQQINSIAFSPNKKYLATCS-NDKTCKIWDSENNFSLIKTIKDHSGYITSV 1887

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             +S      ++      D   K++ +D    N  L  T     DP
Sbjct: 1888 AFSADS---LYMVTGSKDETCKVWQVD---NNFELYVTLKDHQDP 1926



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 56/170 (32%), Gaps = 28/170 (16%)

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             FS + K  +       ++ I+ V+       ++        SA +S +   +       
Sbjct: 1972 SFSPDNKYLVTCSIVIGSLKIFDVNKNFQVVYKIDQPFS---SAVFSNNGKYLA----AR 2024

Query: 324  GKEQLYVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            G  +L+      S Q +   I   +        +SP    +           I   ++DG
Sbjct: 2025 GNNKLFRCHQVFSIQNQFQMIQNSQIGIVTSITFSPDSKYLVTGSEQD--CKIW-SEQDG 2081

Query: 381  SQERLLVEDSNLQAPT------WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             Q +       ++ P+      +S  G+ L F     G +   ++SI  N
Sbjct: 2082 FQLK-----GTIEYPSYVLSIDFSQDGKYLAF----GGQSKYIMFSISPN 2122



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 60/159 (37%), Gaps = 9/159 (5%)

Query: 271  RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            + L++  K+       ++   +  +++T        A +SPD   +     R+   ++Y+
Sbjct: 1391 KLLVTQDKNTINIYNKINENYSLVKQITEFEKETHLAQFSPDGKFLATVLKRD--SEIYI 1448

Query: 331  MQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
              +  +  + +   +E  YF     +S     +A    SGE   I  +     + + + +
Sbjct: 1449 WNAE-NQFEMVKNIREHRYFITCIAFSSDNKYLASASKSGEV-EIWDINDKFKEFKYVFQ 1506

Query: 389  DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               + A  +S   +S I   K+       +Y I + G  
Sbjct: 1507 KFYVSAIAFSDDMQSFICCTKR---LTCNIYDISIVGHT 1542



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 58/171 (33%), Gaps = 14/171 (8%)

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSP 311
            I      +    FS NGK         E   I+ ++      + +  N     +SA++S 
Sbjct: 1538 IVGHTDNVRVVAFSPNGK---YMTTISENKQIWDIEKDFQIIKTMECNFKTYGLSAAFSH 1594

Query: 312  DSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            DS  ++F      KE + ++      +  +  +  E       +S  G  +A        
Sbjct: 1595 DSKYLIF----GLKEVIEILNVEKDFELIQTIKVHELCICGISFSYDGKYVATCGEDDRF 1650

Query: 371  FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              I  + K+      +       +  +S +G+ L       G    +++++
Sbjct: 1651 CKIWNLNKNFELATQIENKFYFHSAVFSRNGKYLA-----TGTKNCQVWNV 1696


>gi|159480296|ref|XP_001698220.1| hypothetical protein CHLREDRAFT_193148 [Chlamydomonas reinhardtii]
 gi|158273718|gb|EDO99505.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 1212

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 66/198 (33%), Gaps = 22/198 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  K+A       D   + L++ +     + + N    +LA  +  +G     +++
Sbjct: 343 SFSPDGTKLA----AAGDDNLIKLVEVKDGSVYRSL-NCDDYVLALAWDPDGAYLAATLR 397

Query: 278 KDEAMDIYSVDLQSNATERLTNT--LFINIS------ASYSPDSSQI-VFESDREGKEQL 328
                 +   D  S   E+  +     ++ S       S+ PD   +       EG   L
Sbjct: 398 TGG---LVVYDTGSGRLEKRVDAQCERVDYSSPRRHAPSWHPDGGSVLAVPVGAEGDVAL 454

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +  + +      +S +   +     +SP G    +   +G+   I V   +         
Sbjct: 455 HE-RLSWEATGYLSGEHRKAVNIVAFSPNG---VYAATAGQDKRIVVWDVNSVTAVAAAT 510

Query: 389 DSNLQAP-TWSPSGRSLI 405
              + +   W P G  L 
Sbjct: 511 AEEVMSGLVWRPDGNELA 528



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/111 (13%), Positives = 31/111 (27%), Gaps = 4/111 (3%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                     P + P+   V       E  + ++      +      G  R  +    FS
Sbjct: 422 VDYSSPRRHAPSWHPDGGSVLAVPVGAEGDVALH-ERLSWEATGYLSGEHRKAVNIVAFS 480

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            NG   + +    +   I   D+ S           +     + PD +++ 
Sbjct: 481 PNG---VYAATAGQDKRIVVWDVNSVTAVAAATAEEVMSGLVWRPDGNELA 528


>gi|21224333|ref|NP_630112.1| hypothetical protein SCO5996 [Streptomyces coelicolor A3(2)]
 gi|15020715|emb|CAC44610.1| putative membrane protein [Streptomyces coelicolor A3(2)]
          Length = 937

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/293 (16%), Positives = 91/293 (31%), Gaps = 21/293 (7%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D + +           WR      +      I   +G   + I F  +            
Sbjct: 328 DGRTVASGGSDGVVRIWRTGTQRTAGR--PLIGHHQGI--TSIAFAPDGRTLASSGFDGT 383

Query: 195 VMDRDGANIRYL---TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           V   D A+   +     +    +    F  + + +   T D+ D   V + D    R   
Sbjct: 384 VRLWDLADRTQIGAPFNAGAGSVRSVAFGRDGRTL--VTVDEADSGTVRVWDVATHRQTG 441

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASY 309
              +    +L     ++G R   S  +      D  S      A +       +  + S+
Sbjct: 442 HPLDGPGPVLGTN--ADGSRVGSSTSQGGIRLWDTASGAPAGGALK---GGDGVVTALSF 496

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSG 368
           S D       +D  G  +L+ +++     + I S           +SP G ++A     G
Sbjct: 497 SSDGKTFA-TADLVGNLRLWDIEARAPVGEPIASPATSTGVRAITFSPDGAMLAAAYEGG 555

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 + ++      LL   S +++  +SP G  L        DT  +L+ +
Sbjct: 556 GVRLWDLRRRAQVGGPLLAHTSTVESVAFSPDGSVLA---SASADTTVRLWDV 605



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/323 (13%), Positives = 99/323 (30%), Gaps = 52/323 (16%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQ------IIGKKFFSSPASWRKIAHTISDDIYQ--- 164
           G V+        V  RLWDV+  +Q        GK   +     R +A   S+   +   
Sbjct: 588 GSVLASASADTTV--RLWDVRTLRQAGAPIDTGGKGAAALSPDGRSLAVVDSEQAVRLWD 645

Query: 165 -SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD--------QILF 215
                  G+   R ++     ++     ++  +  DG  +R +   R           + 
Sbjct: 646 VVARRRVGEPLVRGVYSFSPSLAFRADGAVLAIGADGLRLREVATRRPVGEPLLGTGDVG 705

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              F P+ + +            V++ D      P          +    S +G+    +
Sbjct: 706 ALSFGPDGRTLV-----SGGPDSVHVWDL--TARPPTGTALGPRSVGVALSPDGRSLA-T 757

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +D+ +  + +  +    E   +      + ++SPD + +   + R+   +L+    + 
Sbjct: 758 TTQDDTVVFWDMATRRRIGETPGDHTAQITAVAWSPDGTTLA-TAGRDDTVRLW----DA 812

Query: 336 SDQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG------------ 380
           + ++RI    +         V+SP G  +A     G    + +                 
Sbjct: 813 ATRERIGAPLRGHHGGLTSVVFSPDGATLA---TGGNDHTVRLWDVATERPIGAPLEGHG 869

Query: 381 -SQERLLVEDSNLQAPTWSPSGR 402
                +          +W+  G 
Sbjct: 870 AGVTGVAFTPGGDTLVSWAQDGT 892



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 52/333 (15%), Positives = 93/333 (27%), Gaps = 52/333 (15%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDR----KQIIGKKFFSSPASWRKIAHTISD-- 160
            A     G    +G        RLWD          + G     +  S+     T +   
Sbjct: 454 NADGSRVGSSTSQGG------IRLWDTASGAPAGGALKGGDGVVTALSFSSDGKTFATAD 507

Query: 161 -------DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
                     ++         S         ++     ++     +G  +R     R   
Sbjct: 508 LVGNLRLWDIEARAPVGEPIASPATSTGVRAITFSPDGAMLAAAYEGGGVRLWDLRRRAQ 567

Query: 214 LFEP-----------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +  P            FSP+   +A A+ D      V L D R  R      +      A
Sbjct: 568 VGGPLLAHTSTVESVAFSPDGSVLASASADT----TVRLWDVRTLRQAGAPIDTGGK-GA 622

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              S +G+   +    ++A+ ++ V  +    E L   ++     S+SP    + F +D 
Sbjct: 623 AALSPDGRSLAVVDS-EQAVRLWDVVARRRVGEPLVRGVY-----SFSP---SLAFRADG 673

Query: 323 E----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                G + L + +                     + P G  +     SG   ++ V   
Sbjct: 674 AVLAIGADGLRLREVATRRPVGEPLLGTGDVGALSFGPDGRTLV----SGGPDSVHVWDL 729

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                              SP GRSL  + + D
Sbjct: 730 TARPPTGTALGPRSVGVALSPDGRSLATTTQDD 762



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 51/285 (17%), Positives = 96/285 (33%), Gaps = 39/285 (13%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN-SRILFVSESVVSG 187
           RLWD++ R Q+ G            +AHT         T E   F+    +  S S  + 
Sbjct: 558 RLWDLRRRAQVGG----------PLLAHT--------STVESVAFSPDGSVLASASADTT 599

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
           +    +  + + GA I         +      SP+ + +A    D E  +R++ +  R  
Sbjct: 600 VRLWDVRTLRQAGAPIDTGGKGAAAL------SPDGRSLAVV--DSEQAVRLWDVVARRR 651

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                +    S   +  F ++G  A++++  D          +      L      ++ A
Sbjct: 652 VGEPLVRGVYSFSPSLAFRADG--AVLAIGADGLRLREVATRRPVGEPLLGTG---DVGA 706

Query: 308 -SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S+ PD   +V      G + ++V           +    +       SP G  +A T  
Sbjct: 707 LSFGPDGRTLV----SGGPDSVHVWDLTARPPTGTALGPRS--VGVALSPDGRSLATTTQ 760

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                   +  +    E      + + A  WSP G +L  + + D
Sbjct: 761 DDTVVFWDMATRRRIGETPGDHTAQITAVAWSPDGTTLATAGRDD 805



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 52/178 (29%), Gaps = 16/178 (8%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             + A  F  +G+  +          ++  DL +      T     ++  + SPD   + 
Sbjct: 702 GDVGALSFGPDGRTLV----SGGPDSVHVWDLTARPPTG-TALGPRSVGVALSPDGRSLA 756

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             +     + +         +   +  D  A      WSP G  +A              
Sbjct: 757 TTTQ---DDTVVFWDMATRRRIGETPGDHTAQITAVAWSPDGTTLATAGRDDTVRLWDAA 813

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            ++     L      L +  +SP G +L        D   +L+ +      E  I  P
Sbjct: 814 TRERIGAPLRGHHGGLTSVVFSPDGATLA---TGGNDHTVRLWDV----ATERPIGAP 864



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 64/191 (33%), Gaps = 8/191 (4%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
               RD A ++ L      +     F+   + +A    D     R  ++D  ++ A   +
Sbjct: 255 ATRQRDQAVVQQLITQSSLLAERDPFAARLKALAAWRIDPSPETRFAVLDAAVNPASGVL 314

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +   +  +  FS +G+    S   D  + I+    Q  A   L        S +++PD 
Sbjct: 315 SHSVPVD-SVAFSPDGRTVA-SGGSDGVVRIWRTGTQRTAGRPLIGHHQGITSIAFAPDG 372

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--- 370
             +   S  +G  +L+ + ++ +           S     +   G  +     +      
Sbjct: 373 RTLA-SSGFDGTVRLWDL-ADRTQIGAPFNAGAGSVRSVAFGRDGRTLVTVDEADSGTVR 430

Query: 371 -FAIGVMKKDG 380
            + +   ++ G
Sbjct: 431 VWDVATHRQTG 441



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/166 (11%), Positives = 54/166 (32%), Gaps = 7/166 (4%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           A   +          +D   N    + +      S ++SPD   +       G + +  +
Sbjct: 288 AAWRIDPSPETRFAVLDAAVNPASGVLSHSVPVDSVAFSPDGRTVA----SGGSDGVVRI 343

Query: 332 QSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              G+ +   R             ++P G  +A + F G      +  +           
Sbjct: 344 WRTGTQRTAGRPLIGHHQGITSIAFAPDGRTLASSGFDGTVRLWDLADRTQIGAPFNAGA 403

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            ++++  +   GR+L+ +  +      +++ +  + +    ++ P 
Sbjct: 404 GSVRSVAFGRDGRTLV-TVDEADSGTVRVWDVATHRQTGHPLDGPG 448


>gi|308323530|gb|ADO28901.1| WD repeat-containing protein 61 [Ictalurus punctatus]
          Length = 305

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 78/223 (34%), Gaps = 40/223 (17%)

Query: 102 DWNSLGAQV-LVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W   G Q+ +V+  +   G       L    RLWD++  KQI  K   + P     +A 
Sbjct: 57  QWTLEGHQLGVVSVDISHNGAIAASSSLDTHIRLWDLESGKQI--KSMDAGPVDAWTVA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D                   S+ + +G     + +   +     Y   +R + +  
Sbjct: 114 -FSPD-------------------SKYIATGSHLGKVNIFGIESGKKEYSLDTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L + 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLFTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQI 316
             D  + IY V   +L       L+      +S ++SPD++  
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LSGHASWVLSVAFSPDNTHF 247



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 60/175 (34%), Gaps = 9/175 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S  +   + + D +         +     +   FSP+ + +A  ++  +    V +    
Sbjct: 81  SSSLDTHIRLWDLESGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGK----VNIFGIE 136

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +    +      IL+  +S +GK    S   D  ++I+ +         L        
Sbjct: 137 SGKKEYSLDTRGKFILSIAYSPDGKYLA-SGAIDGIINIFDI-ATGKLLHTLEGHAMPIR 194

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           S ++SPD SQ++F +  +G   + +     ++         +      +SP    
Sbjct: 195 SLTFSPD-SQLLFTASDDGY--IKIYDVQHANLAGTLSGHASWVLSVAFSPDNTH 246



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 59/202 (29%), Gaps = 12/202 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +++        +     S N    A ++ D      + L D    +  K +         
Sbjct: 56  LQWTLEGHQLGVVSVDISHNGAIAASSSLDT----HIRLWDLESGKQIKSMDAGPVDAWT 111

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESD 321
             FS + K    +      ++I+ ++        L T   FI +S +YSPD   +     
Sbjct: 112 VAFSPDSKYIA-TGSHLGKVNIFGIE-SGKKEYSLDTRGKFI-LSIAYSPDGKYLA---S 165

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 + +            +          +SP   L+ FT        I  ++    
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLL-FTASDDGYIKIYDVQHANL 224

Query: 382 QERLLVEDSNLQAPTWSPSGRS 403
              L    S + +  +SP    
Sbjct: 225 AGTLSGHASWVLSVAFSPDNTH 246



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +       Q +         +   +SP    IA     G K  I  ++    +  L 
Sbjct: 87  HIRLWDLESGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLG-KVNIFGIESGKKEYSLD 145

Query: 387 VEDSNLQAPTWSPSGRSLI 405
                + +  +SP G+ L 
Sbjct: 146 TRGKFILSIAYSPDGKYLA 164


>gi|300864127|ref|ZP_07109022.1| WD-40 repeat protein [Oscillatoria sp. PCC 6506]
 gi|300337855|emb|CBN54168.1| WD-40 repeat protein [Oscillatoria sp. PCC 6506]
          Length = 297

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 85/255 (33%), Gaps = 24/255 (9%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEP-- 217
            I+       G  N  I     +  +G    ++ +     G  IR       ++      
Sbjct: 44  QIHSMTGHPYGVKNVVISPNGATFATGGGDGTIKLWSLSKGELIRTFVTGLSRLDSGSMP 103

Query: 218 -RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              SP+ + +A  +      ++++ +DT        +      + A   S +G   L S 
Sbjct: 104 VAISPDGETIASHSSSYSQTVKLWRIDT--GELIGTLTGHAGSVKAFTISPDGD-ILASD 160

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQ 332
             D  + ++ +      TE L +TL  +       + SPD   +V  S     E + +  
Sbjct: 161 GADNTIRLWRL-----VTEELISTLAGHTRDILAIAISPDGQTLVSGSK---DETVRIWN 212

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLV-EDS 390
            +     R       +      S  G ++A   + G    I + +    +  ++L     
Sbjct: 213 LHTGKLLRTLSGHSYAVNSVTISSDGKMLASGGYDG---LIKLRRLSNGELLKILSGHSG 269

Query: 391 NLQAPTWSPSGRSLI 405
           ++ +      G++++
Sbjct: 270 SVNSVAIGADGQTIV 284



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 60/223 (26%), Gaps = 8/223 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG     + +         +        +     SPN    A    D    L       
Sbjct: 26  VSGGEDGKIKLWLLSTGEQIHSMTGHPYGVKNVVISPNGATFATGGGDGTIKLWSLSKGE 85

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            I      +    S  +    S +G+     S    + + ++ +D        LT     
Sbjct: 86  LIRTFVTGLSRLDSGSMPVAISPDGETIASHSSSYSQTVKLWRID-TGELIGTLTGHAGS 144

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + + SPD   +   SD      + + +    +                 SP G  +  
Sbjct: 145 VKAFTISPDGDILA--SD-GADNTIRLWRLVTEELISTLAGHTRDILAIAISPDGQTLV- 200

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
           +    E   I  +   G   R L      + + T S  G+ L 
Sbjct: 201 SGSKDETVRIWNLHT-GKLLRTLSGHSYAVNSVTISSDGKMLA 242


>gi|282863691|ref|ZP_06272749.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Streptomyces sp. ACTE]
 gi|282561392|gb|EFB66936.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Streptomyces sp. ACTE]
          Length = 625

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 55/173 (31%), Gaps = 5/173 (2%)

Query: 260 ILAPRFSSNG-KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +  P ++ +  +R+L         ++Y+ D  S    ++T+          +PD   + +
Sbjct: 41  VSLPDWAQDAPERSLFVSNATGTYELYTWDRASGKQRQVTDRPNGTTDGVLTPDGGSVWW 100

Query: 319 ESDREGKEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            SD +G E    M+     G D+        +          G  +       +   I V
Sbjct: 101 FSDTDGDEFGVWMRQPFEGGPDEPAAPGLGPSYPAGLAIGRDGTAVIGRSTDEDGTTIHV 160

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRN 427
           ++       +     +      S  G  +     + GD   S L  +  +G  
Sbjct: 161 VRPGAEPVEIYRHRESAGVGDLSRDGTLIALEHTEHGDAMHSALRVVRPDGST 213


>gi|291614220|ref|YP_003524377.1| hypothetical protein Slit_1759 [Sideroxydans lithotrophicus ES-1]
 gi|291584332|gb|ADE11990.1| hypothetical protein Slit_1759 [Sideroxydans lithotrophicus ES-1]
          Length = 933

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 79/279 (28%), Gaps = 30/279 (10%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            +       L V      V D +         +    RK+A         S T  +   +
Sbjct: 304 SLAPVPDGVLAV------VNDGRLQPRLVHIDAQGKLRKLAK------VNSGTHIEARSD 351

Query: 175 SRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             +L     +  +      L          R  +  R +           Q  A  T   
Sbjct: 352 GMVLLAQPDICRNYNYYYDLYTWSETAGMQRRTSCGRYRRAAW----LGGQIAALRTAGG 407

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRF--SSNGKRALISVQKDEAMDIYSVDLQS 291
              L V     +  R  + +      + A     S + +   +++++  A  +   D   
Sbjct: 408 VSTLSVLEQHGKQWRESRSLYQTPDQVEAVELAASPDDEHIALAIKQANAWQVLEFDSTG 467

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            A   L N         YS     + F + R+G   L+      ++  R+S    A    
Sbjct: 468 GAPRVLFNYNAPLHELRYSRTGDALEFVAVRDGTYDLWRYTFGSNELTRLSHTYTAVLLH 527

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
              +  G ++           +GV+   G++ R +   +
Sbjct: 528 SGIAQDGSVV-----------LGVLAPGGTELRRMRTTA 555


>gi|189466649|ref|ZP_03015434.1| hypothetical protein BACINT_03024 [Bacteroides intestinalis DSM
           17393]
 gi|189434913|gb|EDV03898.1| hypothetical protein BACINT_03024 [Bacteroides intestinalis DSM
           17393]
          Length = 1330

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 75/167 (44%), Gaps = 22/167 (13%)

Query: 288 DLQSNATERLTNTLFI-NISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRI--SQ 343
           D+++    + TN   + ++   +  D+ +++F   D + + Q++ ++ +G+  K++  + 
Sbjct: 412 DVKTRTIFKPTNGSSVPDLKLHW--DADRLMFSMVDTDRRWQVFEVKLDGTGLKKLIETP 469

Query: 344 DKEASYFDPVWSPQGDLIAFTKFS-------GEKFAIGVM----KKDGSQERLLVEDSNL 392
           +K+  +FD  + P G LIA +               +G M     KDGS  RL  +    
Sbjct: 470 EKDLEFFDATYLPSGKLIAVSNIGYNGVPCVNGNDEVGNMCLYDPKDGSLRRLTFDQDAN 529

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSK----LYSIDLNGRNETLINTPA 435
            APT   +GR ++++R +  D        +  ++ +G  +  +    
Sbjct: 530 WAPTVMNNGR-IMYTRWEYTDLTHYFSRFVMHMNPDGTEQKSLYGSG 575



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 52/168 (30%), Gaps = 21/168 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-- 260
           I   T        +  +  +  ++ ++  D +   +V+ +        K I      +  
Sbjct: 418 IFKPTNGSSVPDLKLHW--DADRLMFSMVDTDRRWQVFEVKLDGTGLKKLIETPEKDLEF 475

Query: 261 LAPRFSSNGKRALISVQ----------KDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
               +  +GK   +S             DE  ++   D +  +  RLT     N + +  
Sbjct: 476 FDATYLPSGKLIAVSNIGYNGVPCVNGNDEVGNMCLYDPKDGSLRRLTFDQDANWAPTVM 535

Query: 311 PDSSQIVFESDREGKEQLY-----VMQSNGSDQKRISQDKEASYFDPV 353
            +   +    +       +      M  +G++QK +      SYF   
Sbjct: 536 NNGRIMYTRWEYTDLTHYFSRFVMHMNPDGTEQKSLY--GSGSYFPNS 581


>gi|2340046|gb|AAB67282.1| secreted dipeptidyl peptidase [Aspergillus fumigatus]
          Length = 721

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/306 (17%), Positives = 101/306 (33%), Gaps = 54/306 (17%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD----GANIRYLTPSRDQILFEPRFS 220
           S++      +  IL+V+ +         L V        G     L  S   +      S
Sbjct: 78  SVSEIVWLSDDSILYVNSTNADIPGGVELWVTQASSFAKGYKAASLPASFSGLKAAKTKS 137

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----FRSMILAPRFSSNGKRALIS- 275
            + + VAY             + T    + +   +         L+  F      A+ S 
Sbjct: 138 GDIRFVAYGQSYPNGTAYNEELATAPLSSARIYDSIYVRHWDYWLSTTF-----NAVFSG 192

Query: 276 -VQKDEAMDIYSVDLQSNATERLTNTLFINISA----------SYSPDSSQIVFESDREG 324
            ++K    + YS+D      + L + +    S             SPD   + F+S    
Sbjct: 193 TLKKGHGKNGYSLD---GELKNLVSPVKNAESPYPPFGGASDYDLSPDGKWVAFKSKAPE 249

Query: 325 KEQ-------LYVMQSNGSDQKRISQDKE---------ASYFDPVWSPQGDLIAFTKFSG 368
             +       +Y++  + S+  R     +              PV+SP GD +A+ +   
Sbjct: 250 LPKANFTTSYIYLVPHDASETARPINGPDSPGTPKGIKGDSSSPVFSPNGDKLAYFQMRD 309

Query: 369 EKFA-----IGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYS 420
           E +      + V      +    V     ++P    W+P G++LI   +  G T  +L+S
Sbjct: 310 ETYESDRALLYVYSLGSKKTIPSVAGDWDRSPDSVKWTPDGKTLIVGSEDLGRT--RLFS 367

Query: 421 IDLNGR 426
           +  N +
Sbjct: 368 LPANAK 373


>gi|46448094|gb|AAS94749.1| hypothetical protein DVU_0266 [Desulfovibrio vulgaris str.
           Hildenborough]
          Length = 408

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 77/248 (31%), Gaps = 29/248 (11%)

Query: 175 SRILFVSESVVSGIIKNSLC--VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + +       V+  ++ SL    +  DG       P     ++EP F P    VA     
Sbjct: 184 TPVFDTHGRRVAAQVRLSLYDYTIAVDGEPWPVTFP----CVWEPVFDPATGSVAAPVRK 239

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           D            +D       +F      PRFS +G+R    V  D      + D    
Sbjct: 240 DGR------WGMALDGNLIWPASFF-QCWHPRFSPDGRRLWAIVAPDYGSFTVACDG--- 289

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                 N   +      SPD S+     + +      ++         +   +    + P
Sbjct: 290 --IPWGNRFPVVSDLVLSPDGSRAAAVGNHDNTRFSVIVDDK------VWPGEWDMVWAP 341

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           V+S  G  +A     G+ F   V   DG   R     S    P + P G  L+    ++G
Sbjct: 342 VFSADGAHVAVKARKGDTFHFIV---DGKPWRE--GFSQAGTPVFGPDGDRLLMCGVQNG 396

Query: 413 DTGSKLYS 420
                + +
Sbjct: 397 AAVRHIVA 404


>gi|323173305|gb|EFZ58934.1| hypothetical protein ECLT68_1596 [Escherichia coli LT-68]
          Length = 101

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 41/108 (37%), Gaps = 14/108 (12%)

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           D  G  QL+++   G + ++++ +K        W P G+ + F   +     I       
Sbjct: 3   DDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLDN----RIACAHAQS 58

Query: 381 SQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +   L E      +  A  +SP G+ L +        G +L+  + +
Sbjct: 59  GEVEYLTENHANPPSADAVVFSPDGQWLAWME------GGQLWITETD 100



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/106 (14%), Positives = 41/106 (38%), Gaps = 11/106 (10%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +  + ++ +  Q     +LT+    I  + ++ P    + F  D     ++    +  
Sbjct: 3   DDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVLD----NRIACAHAQS 58

Query: 336 SDQKRISQD--KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            + + ++++     S    V+SP G  +A+     E   + + + D
Sbjct: 59  GEVEYLTENHANPPSADAVVFSPDGQWLAWM----EGGQLWITETD 100



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 30/90 (33%), Gaps = 3/90 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   L ++   G   R LT ++  I     + P+ + + +    D  I   +    
Sbjct: 2   RDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWLGFVL--DNRIACAHAQSG 59

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++   +   N  S   A  FS +G+    
Sbjct: 60  EVEYLTENHANPPSAD-AVVFSPDGQWLAW 88


>gi|257091691|ref|YP_003165332.1| peptidase C14 caspase catalytic subunit p20 [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257044215|gb|ACV33403.1| peptidase C14 caspase catalytic subunit p20 [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 997

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 75/235 (31%), Gaps = 20/235 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKR--IGNFRSMIL 261
           + P     ++    SP+ +++A       D     +YL D    R P +  +    + + 
Sbjct: 84  IGPEGVGAIYAAALSPDGKQIALGGNAAFDGKTHSLYLFDRASGRLPAKSTLSGLEAPLT 143

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVF 318
              +S + +   + +++                  + +    N     A +S D   +  
Sbjct: 144 QLAWSKDSQLVAVGLRQSGLRVFQ------RNLGFVGSDPEYNEAIYGADFSTDGRLVTC 197

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             D  G  +LY +   G  +    Q      +   +SP G LIA          I V+  
Sbjct: 198 SLD--GSVRLYRVDKKGLVRTARKQLASGRPYSVAFSPDGSLIAVGYQDAG--HIDVLDA 253

Query: 379 DGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                       ++ NL    W+  GR LI +     +    +++    GR    
Sbjct: 254 ASLTPVYATPSSKEGNLGRVAWTGDGRVLIGAGTARANERFAVFAFGDAGRGPAR 308



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 59/195 (30%), Gaps = 15/195 (7%)

Query: 258 SMILAPRFSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSP 311
             I A   S +GK+  +   +    +   +Y  D  S      +    +       ++S 
Sbjct: 90  GAIYAAALSPDGKQIALGGNAAFDGKTHSLYLFDRASGRLPAKSTLSGLEAPLTQLAWSK 149

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D SQ+V    R+   +++              +   + +   +S  G L+  T       
Sbjct: 150 D-SQLVAVGLRQSGLRVFQRNLGFVGS---DPEYNEAIYGADFSTDGRLV--TCSLDGSV 203

Query: 372 AIGVMKKDG--SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            +  + K G     R  +      +  +SP G  +     +D      L +  L     T
Sbjct: 204 RLYRVDKKGLVRTARKQLASGRPYSVAFSPDGSLIA-VGYQDAGHIDVLDAASLTPVYAT 262

Query: 430 LINTPAYASDPQWVG 444
             +         W G
Sbjct: 263 PSSKEGNLGRVAWTG 277


>gi|150007281|ref|YP_001302024.1| hypothetical protein BDI_0626 [Parabacteroides distasonis ATCC
           8503]
 gi|149935705|gb|ABR42402.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 1334

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 60/145 (41%), Gaps = 22/145 (15%)

Query: 268 NGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIV------ 317
           +G RA+ +    D+  +++ V L  +  ++L +    ++     +Y PD   I       
Sbjct: 431 DGDRAMFTQTMPDKRWNVFEVKLDGSGFKQLIHNEEPDLEFYDGTYLPDGRIIANSNIGY 490

Query: 318 ----FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                 S  +    + +   +  + +R++ D++A++ +PV    G  + +T++       
Sbjct: 491 QGVPCVSGDDPVGNMVLYTPDTKNLRRLTFDQDANW-NPVVMNNGR-VMYTRWEYTDLTH 548

Query: 374 GV------MKKDGSQERLLVEDSNL 392
                   M  DG++++ L    ++
Sbjct: 549 YYSRIVMNMNPDGTEQKALYGSGSM 573


>gi|115673122|ref|XP_792128.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115973841|ref|XP_001183307.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 2780

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 73/217 (33%), Gaps = 11/217 (5%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
            +     ++ V + +       +P  + I++   ++P +   +   T  +      ++ D 
Sbjct: 1760 TASFDGTIKVWNINSWTAVDSSPGNEGIIYSISWAPADLNCLMAGTSRNG----AFIWDI 1815

Query: 245  RIDRAPKRIGNF-RSMILAPRF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
               +  KR     R+ I +  +   + +R                ++     +R      
Sbjct: 1816 TKGKIIKRYTEHGRTSIYSVAWCHKDSRRVA---SCGADNYCIVREIDGKMLQRY-KHPS 1871

Query: 303  INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                  +SP++  ++     +GK ++Y + +      +      A  F   WSP  D I 
Sbjct: 1872 AVFGCDWSPNNKDMIATGCGDGKVRVYYIATANDQPLKTFPGHTAKVFHVRWSPLRDGIL 1931

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
             +        I    +D     L+   ++++   W+P
Sbjct: 1932 CSGSDDGTIRIWDYTQDSCVNILVGHGAHVRGLMWNP 1968



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/337 (16%), Positives = 119/337 (35%), Gaps = 46/337 (13%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
              D  +   RLW+V     I+  K  S+        H++   ++ +     GD++S    
Sbjct: 1629 SGDAHQGVLRLWNVSKPTPILSLKLKSTGF------HSLC--VFNASPHGTGDYDSSSSS 1680

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
             S +  + +   S  V        R      +     P         A  T+DD  +  +
Sbjct: 1681 PSHTG-NHVSSTSQAVA------PRRTNDHHNSYALPPGH-------AVCTFDDGGV-GL 1725

Query: 240  YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            Y +  +     + +G+  ++    +F  +    L +   D  + +++++    +   + +
Sbjct: 1726 YDLGKKRWDFLRELGHVETIFDC-KFKPDNPDLLATASFDGTIKVWNIN----SWTAVDS 1780

Query: 300  TLFIN---ISASYSP-DSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVW 354
            +        S S++P D + ++  + R G    ++     G   KR ++    S +   W
Sbjct: 1781 SPGNEGIIYSISWAPADLNCLMAGTSRNGA---FIWDITKGKIIKRYTEHGRTSIYSVAW 1837

Query: 355  -SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                   +A      + + I V + DG   +     S +    WSP+ + +I      GD
Sbjct: 1838 CHKDSRRVA--SCGADNYCI-VREIDGKMLQRYKHPSAVFGCDWSPNNKDMI--ATGCGD 1892

Query: 414  TGSKLYSIDLNGRNETLINTPAY---ASDPQWVGFMD 447
               ++Y I     ++ L   P +       +W    D
Sbjct: 1893 GKVRVYYI-ATANDQPLKTFPGHTAKVFHVRWSPLRD 1928


>gi|73670899|ref|YP_306914.1| hypothetical protein Mbar_A3461 [Methanosarcina barkeri str.
           Fusaro]
 gi|72398061|gb|AAZ72334.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 1667

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 81/225 (36%), Gaps = 17/225 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V  ++ N + V+D    N+       +        SPN  KV Y T    + + V     
Sbjct: 83  VGNVLSNDVSVIDTATNNVITTVSVGNSPQGV-AVSPNGNKV-YVTNRYSNNVSVIDTTA 140

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               +    G +   +     S +GK+  ++   D  + I  +D  + A   +  T+ + 
Sbjct: 141 NTVVSTVNTGKYPEGV---AVSPDGKKIYVTNYADNTVSI--IDTATKA---IITTVSVG 192

Query: 305 ISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                   +PD ++ V+  + +G+  + ++ +  +     +     + F    +P G  +
Sbjct: 193 KGPKEIVVTPDGNR-VYVVNYDGRS-ISIIDTATNSVTN-TVKLGGTPFGVAVNPDGKKV 249

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
             T  +     + V+    ++    +    +    + +P G+ + 
Sbjct: 250 YVTNNAEHFSTVSVIDTATNKIISTIPVGPDPVGISVTPDGKKVY 294



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 82/219 (37%), Gaps = 39/219 (17%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIY 285
           +A   + +   V ++DT  ++    I    S  +    + NG R  +   +  D    + 
Sbjct: 38  FAYITNAESNSVSVIDTATNKVTAAI-PVGSNPMGVVINPNGTRVYVGNVLSND----VS 92

Query: 286 SVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +D  +N    +  T+ +  S    + SP+ ++ V+ ++R       V   + +    +S
Sbjct: 93  VIDTATNN---VITTVSVGNSPQGVAVSPNGNK-VYVTNRYSNN---VSVIDTTANTVVS 145

Query: 343 QDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWS 398
                 Y      SP G  I  T ++    +I     D + + ++   S  + P     +
Sbjct: 146 TVNTGKYPEGVAVSPDGKKIYVTNYADNTVSI----IDTATKAIITTVSVGKGPKEIVVT 201

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           P G  +              Y ++ +GR+ ++I+T   +
Sbjct: 202 PDGNRV--------------YVVNYDGRSISIIDTATNS 226



 Score = 36.9 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 22/216 (10%), Positives = 70/216 (32%), Gaps = 17/216 (7%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ +K+  A  D + +  +      +        N   + +     ++GK+  I+ +   
Sbjct: 512 PDGKKLYVADRDIKAVSIIDTSTNTVTATVPVGVNPLGVAIT----TDGKKVYITNRYSN 567

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            +    +D  +N               + +P  +++   +       + +++ + +    
Sbjct: 568 TVS--VIDTSTNNVISTVEVGSGPCGVTINPMGTELYVTNCES--NTISIIEISSNTVTS 623

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TW 397
                E        +P G  +          ++     D + + ++      ++P     
Sbjct: 624 TVPVGEWPM-GIAVTPDGKKVYVVNEGSNNVSV----IDTATKTVIATVKVRKSPYGIAI 678

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +P G+ +  +   + D      SI ++   + +  T
Sbjct: 679 TPDGKKVYVANSGNSDNLGNTASI-IDTATDRVTAT 713


>gi|62860034|ref|NP_001016608.1| POC1 centriolar protein homolog A [Xenopus (Silurana) tropicalis]
 gi|89269936|emb|CAJ83727.1| WD repeat domain 51A [Xenopus (Silurana) tropicalis]
 gi|166796961|gb|AAI58995.1| WD repeat domain 51B [Xenopus (Silurana) tropicalis]
          Length = 441

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 76/209 (36%), Gaps = 19/209 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+PN +++A  + D      + + + +      R    +  IL+  FS +G     S  +
Sbjct: 26  FNPNTKQLASGSMDS----CLMIWNMKPQMRAYRFVGHKDAILSVDFSPSGHLIA-SASR 80

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D+ + ++   ++   +           S S+S D   +V  SD    ++   + +    +
Sbjct: 81  DKTVRLWVPSVK-GESTVFKAHTGTVRSVSFSGDGQSLVTASD----DKTIKVWTVHRQK 135

Query: 339 KRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAP 395
              S ++  ++     +SP G LI           I +  K   +           +   
Sbjct: 136 FLFSLNQHINWVRCAKFSPDGRLIVSASDDKT---IKLWDKTSRECIHSFCEHGGFVNFV 192

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            + PSG  +  +     D   K++ I +N
Sbjct: 193 DFHPSGTCIAAAAT---DNTVKVWDIRMN 218



 Score = 43.1 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 61/166 (36%), Gaps = 9/166 (5%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             R  +    F+ N K+   S   D  + I+++  Q  A   + +   I +S  +SP   
Sbjct: 16  GHRDTVTTVDFNPNTKQLA-SGSMDSCLMIWNMKPQMRAYRFVGHKDAI-LSVDFSPSGH 73

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            I   S R+   +L+V    G     + +    +     +S  G  +  T    +   + 
Sbjct: 74  LIASAS-RDKTVRLWVPSVKGEST--VFKAHTGTVRSVSFSGDGQSLV-TASDDKTIKVW 129

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            + +      L    + ++   +SP GR ++ +     D   KL+ 
Sbjct: 130 TVHRQKFLFSLNQHINWVRCAKFSPDGRLIVSASD---DKTIKLWD 172



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 34/280 (12%), Positives = 79/280 (28%), Gaps = 35/280 (12%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           ++R + H   D I        G            + S     ++ +          +  +
Sbjct: 53  AYRFVGHK--DAILSVDFSPSG----------HLIASASRDKTVRLWVPSVKGESTVFKA 100

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    FS + Q +  A+ D      + +      +    +    + +   +FS +G
Sbjct: 101 HTGTVRSVSFSGDGQSLVTASDDK----TIKVWTVHRQKFLFSLNQHINWVRCAKFSPDG 156

Query: 270 KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R ++S   D+ + ++  D  S                  + P  + I   +       +
Sbjct: 157 -RLIVSASDDKTIKLW--DKTSRECIHSFCEHGGFVNFVDFHPSGTCIAAAAT---DNTV 210

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V     +   +  Q          + P G+ +           + ++     + RLL  
Sbjct: 211 KVWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLL-----EGRLLYT 265

Query: 389 DSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               Q P     +S  G    F      D    ++  + +
Sbjct: 266 LHGHQGPVTSVKFSREGE---FFASGGSDEQVMVWKTNFD 302


>gi|328703771|ref|XP_001946552.2| PREDICTED: protein will die slowly-like [Acyrthosiphon pisum]
          Length = 317

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 76/208 (36%), Gaps = 15/208 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            ++++        +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 18  YSLKFTMSGHTMAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKYEKSIAGHKLGI 73

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + ++ +   S     L          +++P S+ I   S
Sbjct: 74  SDVSWSSD-SRLLVSASDDKTLKVWELS-SSKCVMTLKGHSDYVFCCNFNPQSNLIASGS 131

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                + + + +       +             ++  G L+    + G      V     
Sbjct: 132 Y---DQSVRIWEVKSGKCLKTLSAHSDPVSAVNFNRDGSLVISCSYDG---LCRVWDTAS 185

Query: 381 SQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
            Q  + L+++ N  L    +SP+G+ ++
Sbjct: 186 GQCLKTLIDNENTPLSFVKFSPNGKYIL 213


>gi|298375268|ref|ZP_06985225.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
 gi|298267768|gb|EFI09424.1| conserved hypothetical protein [Bacteroides sp. 3_1_19]
          Length = 1328

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 60/145 (41%), Gaps = 22/145 (15%)

Query: 268 NGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIV------ 317
           +G RA+ +    D+  +++ V L  +  ++L +    ++     +Y PD   I       
Sbjct: 425 DGDRAMFTQTMPDKRWNVFEVKLDGSGFKQLIHNEEPDLEFYDGTYLPDGRIIANSNIGY 484

Query: 318 ----FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                 S  +    + +   +  + +R++ D++A++ +PV    G  + +T++       
Sbjct: 485 QGVPCVSGDDPVGNMVLYTPDTKNLRRLTFDQDANW-NPVVMNNGR-VMYTRWEYTDLTH 542

Query: 374 GV------MKKDGSQERLLVEDSNL 392
                   M  DG++++ L    ++
Sbjct: 543 YYSRIVMNMNPDGTEQKALYGSGSM 567


>gi|262382148|ref|ZP_06075286.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262297325|gb|EEY85255.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 1328

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 60/145 (41%), Gaps = 22/145 (15%)

Query: 268 NGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIV------ 317
           +G RA+ +    D+  +++ V L  +  ++L +    ++     +Y PD   I       
Sbjct: 425 DGDRAMFTQTMPDKRWNVFEVKLDGSGFKQLIHNEEPDLEFYDGTYLPDGRIIANSNIGY 484

Query: 318 ----FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                 S  +    + +   +  + +R++ D++A++ +PV    G  + +T++       
Sbjct: 485 QGVPCVSGDDPVGNMVLYTPDTKNLRRLTFDQDANW-NPVVMNNGR-VMYTRWEYTDLTH 542

Query: 374 GV------MKKDGSQERLLVEDSNL 392
                   M  DG++++ L    ++
Sbjct: 543 YYSRIVMNMNPDGTEQKALYGSGSM 567


>gi|255014094|ref|ZP_05286220.1| hypothetical protein B2_09297 [Bacteroides sp. 2_1_7]
          Length = 1328

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 60/145 (41%), Gaps = 22/145 (15%)

Query: 268 NGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIV------ 317
           +G RA+ +    D+  +++ V L  +  ++L +    ++     +Y PD   I       
Sbjct: 425 DGDRAMFTQTMPDKRWNVFEVKLDGSGFKQLIHNEEPDLEFYDGTYLPDGRIIANSNIGY 484

Query: 318 ----FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                 S  +    + +   +  + +R++ D++A++ +PV    G  + +T++       
Sbjct: 485 QGVPCVSGDDPVGNMVLYTPDTKNLRRLTFDQDANW-NPVVMNNGR-VMYTRWEYTDLTH 542

Query: 374 GV------MKKDGSQERLLVEDSNL 392
                   M  DG++++ L    ++
Sbjct: 543 YYSRIVMNMNPDGTEQKALYGSGSM 567


>gi|149919332|ref|ZP_01907814.1| Peptidase C14, caspase catalytic subunit p20 [Plesiocystis pacifica
            SIR-1]
 gi|149819832|gb|EDM79256.1| Peptidase C14, caspase catalytic subunit p20 [Plesiocystis pacifica
            SIR-1]
          Length = 1260

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 103/312 (33%), Gaps = 67/312 (21%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKV 226
              +G ++  +     +VVS        V   D G + R L   R+ I+       + + +
Sbjct: 797  HAQGVWSLGLGVDGRTVVSAGFDGVAKVQTLDEGGSARVLRGHREGIVTA-SLDASGRWL 855

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKDEAM 282
            A  ++D      V + D   +   + +    + + A    + G+       ++  +D  +
Sbjct: 856  ATGSWDT----DVRVWDLAREPLSRELSGTGAPVQAVA--AEGEALASPRVLTAARDGRV 909

Query: 283  DIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             ++  D  S A   L ++        A++SPD  ++    DR G+ + +     G D+  
Sbjct: 910  RLW--DAGSGAA--LGSSAGGEALNVAAFSPDGRRVAM-GDRSGQVRAWT---PGEDEGV 961

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-------------------S 381
            +      + +D  +SP G  +A     G      +   +                     
Sbjct: 962  VIGRHRRAVWDLAFSPDGSRLATVSGDGSGRIWALDSGESVTPSVVLEGHEGRVEQVAFG 1021

Query: 382  QERLLVEDSNLQAPTW-----------------------SPSGRSLIFSRKKDGDTGSKL 418
             +R+    S+     W                       SP  R L  +     D  ++L
Sbjct: 1022 AQRVYTAGSDNSVRAWEARTGAQAQVFEGHRAAVRALALSPDRRRLATASD---DREARL 1078

Query: 419  YSIDLNGRNETL 430
            +S+D  G +  L
Sbjct: 1079 WSLDKAGASVIL 1090



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 47/336 (13%), Positives = 105/336 (31%), Gaps = 40/336 (11%)

Query: 72   DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
            DL R  +   +S      +    +             + L + RV+   +D      RLW
Sbjct: 868  DLAREPLSRELSGTGAPVQAVAAEG------------EALASPRVLTAARDG---RVRLW 912

Query: 132  DVKDRKQIIGKK-------FFSSPASWRKIAHTISDDIYQSITGE-KGDFNSRILFVSES 183
            D      +              SP   R      S  +     GE +G    R       
Sbjct: 913  DAGSGAALGSSAGGEALNVAAFSPDGRRVAMGDRSGQVRAWTPGEDEGVVIGRHRRAVWD 972

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-----QKVAYAT---YDDED 235
            +      + L  +  DG+   +   S + +   P           ++VA+     Y    
Sbjct: 973  LAFSPDGSRLATVSGDGSGRIWALDSGESVT--PSVVLEGHEGRVEQVAFGAQRVYTAGS 1030

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
               V   + R     +     R+ + A   S + +R   +   D    ++S+D    +  
Sbjct: 1031 DNSVRAWEARTGAQAQVFEGHRAAVRALALSPDRRRLA-TASDDREARLWSLDKAGASVI 1089

Query: 296  RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
               ++  +  + ++ P  +++   S         V  +   +   + +  E S    V+ 
Sbjct: 1090 LEGHSQGL-TALAFDPSGARLATAS---ADHDARVWSTRTGELLHLLRGHEGSVLGVVFV 1145

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             +  L+  +     +  + ++ + G +  ++V D +
Sbjct: 1146 DEQRLL--SHGDDAQVRLWLLGEPGEEPAVIVLDGH 1179


>gi|58267636|ref|XP_570974.1| general transcriptional repressor [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|58267638|ref|XP_570975.1| general transcriptional repressor [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134112265|ref|XP_775108.1| hypothetical protein CNBE3820 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257760|gb|EAL20461.1| hypothetical protein CNBE3820 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57227208|gb|AAW43667.1| general transcriptional repressor, putative [Cryptococcus
           neoformans var. neoformans JEC21]
 gi|57227209|gb|AAW43668.1| general transcriptional repressor, putative [Cryptococcus
           neoformans var. neoformans JEC21]
          Length = 564

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 74/232 (31%), Gaps = 30/232 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALIS 275
           +FS + + +A        I  V     R+      + N      I +  FS +GK    +
Sbjct: 250 KFSNDGKYLATGCNRTAQIYDVKT-GARVSTLQDDLANRTGDLYIRSICFSPDGKFLA-T 307

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             +D  + I+  DL+      L         S  +S D   +V  S   G +   +    
Sbjct: 308 GAEDRQIRIW--DLKQRRICHLLQGHMQEIYSLDFSRDGRFLVSGS---GDKSARIWDVE 362

Query: 335 GSDQK---RI-------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-- 382
                   +I           +A       SP G L+A          + V      Q  
Sbjct: 363 KGTCVFNLQIEDFIHNEHGPIDAGITSVALSPDGKLVAAGSLDT---MVRVWNVSTGQQV 419

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           ERL     ++ +  +SP G+ L+      G     L   DL G    + + P
Sbjct: 420 ERLKGHKDSVYSVAFSPDGKCLV-----SGSLDRTLRIWDLTGTKREVESLP 466



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 78/244 (31%), Gaps = 50/244 (20%)

Query: 150 SWRKIAHTI---SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG--ANIR 204
             R+I H +     +IY       G F            SG     +  +++     N++
Sbjct: 320 KQRRICHLLQGHMQEIYSLDFSRDGRFLVS--------GSGDKSARIWDVEKGTCVFNLQ 371

Query: 205 ---YLTPSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
              ++      I         SP+ + VA  + D      V + +    +  +R+   + 
Sbjct: 372 IEDFIHNEHGPIDAGITSVALSPDGKLVAAGSLDT----MVRVWNVSTGQQVERLKGHKD 427

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-------------------LTN 299
            + +  FS +GK  L+S   D  + I+  DL     E                    L  
Sbjct: 428 SVYSVAFSPDGK-CLVSGSLDRTLRIW--DLTGTKREVESLPPGKEAQKNLGTCQSTLNG 484

Query: 300 TLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                +S + SPD   +V  S DR     +     +    + + Q  + S      +  G
Sbjct: 485 HKDYVLSVAISPDGQWVVSGSKDRS----IQFWHISTGQAQLMLQGHKNSVISIDLARSG 540

Query: 359 DLIA 362
             +A
Sbjct: 541 GYLA 544



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 49/186 (26%), Gaps = 46/186 (24%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
               L    R+W+V   +Q+            R   H   D +Y       G        
Sbjct: 400 AAGSLDTMVRVWNVSTGQQVE-----------RLKGHK--DSVYSVAFSPDGKCL----- 441

Query: 180 VSESVVSGIIKNSLCVMDRDG------------------ANIRYLTPSRDQILFEPRFSP 221
                VSG +  +L + D  G                     +         +     SP
Sbjct: 442 -----VSGSLDRTLRIWDLTGTKREVESLPPGKEAQKNLGTCQSTLNGHKDYVLSVAISP 496

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + Q V   + D      +        +A   +   ++ +++   + +G     S   D  
Sbjct: 497 DGQWVVSGSKDR----SIQFWHISTGQAQLMLQGHKNSVISIDLARSGGYLA-SGSGDCM 551

Query: 282 MDIYSV 287
             I+  
Sbjct: 552 ARIWKY 557


>gi|311255442|ref|XP_003126227.1| PREDICTED: aladin-like isoform 2 [Sus scrofa]
          Length = 513

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/297 (13%), Positives = 95/297 (31%), Gaps = 29/297 (9%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQS---ITGEKGDFNSRILFVSESVVSGIIKN 191
           + + + G  + S P  +R     +           T  + D  +R  F+           
Sbjct: 22  NNELVTGSSYESPPPDFRGQWINLPVLNLTKDPLKTPGRLDHGTRTAFIHHREQVWKRCI 81

Query: 192 SLC-----------VMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATYDDEDILR 238
           ++            + + +     ++  +    L   R+  S +     + +   ED++ 
Sbjct: 82  NIWRDVGVFGVLNEIANSEEEVFEWVKTASSWALALCRWASSLHGSLFPHLSLRSEDLIA 141

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--- 295
            +   T     P      +  + A  +       L    +   + I+++D  S +T    
Sbjct: 142 EFAQVTNCTIVPSLKHRLQRNVAALAWKPLSASVLAVACQS-CILIWTLDPTSLSTRPSS 200

Query: 296 ---RLTNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              ++ +        S +++P   +++  S  +    + V   +      +   +     
Sbjct: 201 GCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAILVWDVSTETCVPLPWFRGGGVT 258

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           + +WSP G  +  T  S   F +   +     ER        Q   WSP G  L+F+
Sbjct: 259 NLLWSPDGSKVLATTPS-AVFRVWEAQMWT-CERWPTLSGRCQTGCWSPDGSRLLFT 313


>gi|290999687|ref|XP_002682411.1| predicted protein [Naegleria gruberi]
 gi|284096038|gb|EFC49667.1| predicted protein [Naegleria gruberi]
          Length = 272

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 68/193 (35%), Gaps = 18/193 (9%)

Query: 186 SGIIKNSLCVMD-----RDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +G    ++ + D      D  N   +      + + +  +SP+   +  A+ D      V
Sbjct: 19  TGSADGTIQIWDLISKVSDHENKPTVKCVGHIKGVNDVCWSPDSLFICSASDDG----SV 74

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLT 298
            L  +        +           +S +G     S   DE + ++  D+++      L 
Sbjct: 75  RLWSSETGEILMILHGHNQFAYCVAYSPSGNIIA-SGSYDETVRLW--DVKTGKCLRTLP 131

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSP 356
                  S S+S D S +V  S  +G  +++   + G   K I +D   +        SP
Sbjct: 132 AHSDPVTSVSFSRDGSLLV-TSSYDGFCRIWDT-TTGQCLKTILKDPHDAPPLSCAKLSP 189

Query: 357 QGDLIAFTKFSGE 369
            G+ +  +  S E
Sbjct: 190 HGNYLLVSTMSKE 202


>gi|119492438|ref|ZP_01623759.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
 gi|119453104|gb|EAW34273.1| WD-40 repeat protein [Lyngbya sp. PCC 8106]
          Length = 304

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 73/220 (33%), Gaps = 19/220 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + +  A+ D +    + + + +       +G     +     S +G+    +  
Sbjct: 17  AVSPDGKILISASEDGK----IKVWNFKTGECLLTLGGHPFGVKNVAVSPDGEFFA-TGG 71

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQIVFESDREGKEQLYVMQS 333
            D  + I+S+         L        S        P++  I+  S     + + +   
Sbjct: 72  GDGTIKIWSL-KNGKLLRTLVTGYSRLDSGFMPVAIVPNAKTIISHSS-SYSQTVRLWDV 129

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                K        S      SP+GD++A +  +     +  ++ +     L      + 
Sbjct: 130 ETGQLKGTLTGHAGSVKTFSISPRGDILA-SDGADNSIRLWKLQNEELIGILEGHTGGVL 188

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             T SP G +L+       D   +++ I    R + L+ T
Sbjct: 189 TLTVSPDGETLV---SGGKDETIRIWQI----RTQKLLRT 221



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 24/187 (12%)

Query: 121 KDRLRVEFRLWDVKDRK---QIIG-----KKFFSSPASWRKIAHTISDDI------YQSI 166
                   RLWDV+  +    + G     K F  SP      +    + I       + +
Sbjct: 117 SSSYSQTVRLWDVETGQLKGTLTGHAGSVKTFSISPRGDILASDGADNSIRLWKLQNEEL 176

Query: 167 TGEKGDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            G        +L ++ S      VSG    ++ +       +          +   + SP
Sbjct: 177 IGILEGHTGGVLTLTVSPDGETLVSGGKDETIRIWQIRTQKLLRTLSGHSYAVNSVKISP 236

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N   +A   YD      + L D         +      +    FS + K  L+S  +D+ 
Sbjct: 237 NGHILASGGYDS----LIKLRDLNTGDLLNLLSGHSGAVNTVTFSPDAK-ILVSGSEDKT 291

Query: 282 MDIYSVD 288
           + ++++D
Sbjct: 292 IKLWNLD 298


>gi|291294673|ref|YP_003506071.1| hypothetical protein Mrub_0273 [Meiothermus ruber DSM 1279]
 gi|290469632|gb|ADD27051.1| hypothetical protein Mrub_0273 [Meiothermus ruber DSM 1279]
          Length = 378

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/262 (15%), Positives = 82/262 (31%), Gaps = 54/262 (20%)

Query: 208 PSRDQILFEPRFSPNQQKVAY------------ATYDDEDILRVYLMDTRIDRAPKRIGN 255
              D  L+ P  SPN++ V +              Y         + D RI  A     +
Sbjct: 117 DKGDYNLYSPSISPNRRYVGFARNERVKAVNTNVNYGGFKESFYQIKDGRITLARTDGSS 176

Query: 256 FRS------MILAPRFSSNGKRALISVQKDE----AMDIYSVDLQSNATERLTNTLFINI 305
           +         +   +F+ +     +   +         I+ +DL +   + +      + 
Sbjct: 177 WFDVHCDTHWLGHFQFAPDDPTLAMFCHEGPWNLVTQRIWLLDLAARQVKPIFRQDEQDS 236

Query: 306 SA--SYSPDS-------------------SQIVFESDREGKEQLYV--MQSNGSDQKRIS 342
                ++ D                    +Q V +S      + YV  M   G   +RI 
Sbjct: 237 VGHEFWTQDGLIFFDNRGPGHDGTITSAKTQAVVQSPSPDNFRPYVGLMDREGRLVRRIE 296

Query: 343 QDKEASYFDPVWS------PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                +++    S         D +     SGE+  + V+ + G+        ++   PT
Sbjct: 297 MPFYCNHYHANPSNTLLVGDDADNLVLIDISGEQARLEVLCEHGTS---WHTQASHCHPT 353

Query: 397 WSPSGRSLIFSRKKDGDTGSKL 418
           WS  G+ ++++  + G     L
Sbjct: 354 WSWDGKRILYASDRGGRVNLYL 375



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/183 (14%), Positives = 61/183 (33%), Gaps = 24/183 (13%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R           +P F  ++Q      +  +D L     D R       I + ++  + 
Sbjct: 213 QRIWLLDLAARQVKPIFRQDEQDSVGHEFWTQDGL--IFFDNRGPGHDGTITSAKTQAVV 270

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
              S +          +    +  +D +     R+    + N   + +P ++ +V     
Sbjct: 271 QSPSPD----------NFRPYVGLMDREGRLVRRIEMPFYCNHYHA-NPSNTLLV----G 315

Query: 323 EGKEQLYVMQSNGSDQK-------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +  + L ++  +G   +         S   +AS+  P WS  G  I +    G +  + +
Sbjct: 316 DDADNLVLIDISGEQARLEVLCEHGTSWHTQASHCHPTWSWDGKRILYASDRGGRVNLYL 375

Query: 376 MKK 378
           ++ 
Sbjct: 376 LEL 378


>gi|295669113|ref|XP_002795105.1| WD repeat-containing protein [Paracoccidioides brasiliensis Pb01]
 gi|226285798|gb|EEH41364.1| WD repeat-containing protein [Paracoccidioides brasiliensis Pb01]
          Length = 592

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/328 (15%), Positives = 117/328 (35%), Gaps = 56/328 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G +R     +++DV+  + +   +                DD   S+  ++GD 
Sbjct: 295 GKFVATGCNR---SAQIFDVQSGQLVTSLQ----------------DD---SVLDKEGDL 332

Query: 174 NSRILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             R +  S       +G     + V D     I+++    +Q ++   F+ N + +A  +
Sbjct: 333 YIRSVCFSPDGRYLATGAEDKQIRVWDIQKRTIKHIFSGHEQDIYSLDFARNGRYIASGS 392

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D      V L D  +D   + I +    +     S +G+    +   D+++ ++  D  
Sbjct: 393 GDK----TVRLWDI-VDGKQELILSIEDGVTTVAISPDGRFVA-AGSLDKSVRVW--DTT 444

Query: 291 SNAT-ERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN----------GS 336
           +    ERL N    +    S +++P+   +V  S  +   +L+ +             G 
Sbjct: 445 TGYLIERLENPDGHMDSVYSVAFAPNGRDLVSGSL-DKTIKLWELTPPRGMVPGSGPKGG 503

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
              R  +  +        +P G  +           +          +++++       +
Sbjct: 504 KCVRTFEGHKDFVLSVCLTPDGRWVMSGSKDRG---VQFWDPATGNAQMMLQGHKNSVIS 560

Query: 397 WSPS--GRSLIFSRKKDGDTGSKLYSID 422
            +PS  G   +F+    GD  ++++S  
Sbjct: 561 VAPSPVGN--LFATG-SGDMRARIWSYS 585



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 17/158 (10%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA------- 307
             S++   RFS++GK                 D+QS      L +   ++          
Sbjct: 282 HDSVVCCVRFSNDGKFVA----TGCNRSAQIFDVQSGQLVTSLQDDSVLDKEGDLYIRSV 337

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD   +   ++    +Q+ V        K I    E   +   ++  G  IA     
Sbjct: 338 CFSPDGRYLATGAE---DKQIRVWDIQKRTIKHIFSGHEQDIYSLDFARNGRYIASGSGD 394

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  ++  DG QE +L  +  +     SP GR + 
Sbjct: 395 KTVRLWDIV--DGKQELILSIEDGVTTVAISPDGRFVA 430


>gi|225678600|gb|EEH16884.1| transcriptional repressor TUP1 [Paracoccidioides brasiliensis Pb03]
          Length = 592

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 50/328 (15%), Positives = 117/328 (35%), Gaps = 56/328 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G +R     +++DV+  + +   +                DD   S+  ++GD 
Sbjct: 295 GKFVATGCNR---SAQIFDVQSGQLVTSLQ----------------DD---SVLDKEGDL 332

Query: 174 NSRILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             R +  S       +G     + V D     I+++    +Q ++   F+ N + +A  +
Sbjct: 333 YIRSVCFSPDGRYLATGAEDKQIRVWDIQKRTIKHIFSGHEQDIYSLDFARNGRYIASGS 392

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D      V L D  +D   + I +    +     S +G+    +   D+++ ++  D  
Sbjct: 393 GDK----TVRLWDI-VDGKQELILSIEDGVTTVAISPDGRFVA-AGSLDKSVRVW--DTT 444

Query: 291 SNAT-ERLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN----------GS 336
           +    ERL N    +    S +++P+   +V  S  +   +L+ +             G 
Sbjct: 445 TGYLIERLENPDGHMDSVYSVAFAPNGRDLVSGSL-DKTIKLWELTPPRGMVPGSGPKGG 503

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
              R  +  +        +P G  +           +          +++++       +
Sbjct: 504 KCVRTFEGHKDFVLSVCLTPDGRWVMSGSKDRG---VQFWDPATGNAQMMLQGHKNSVIS 560

Query: 397 WSPS--GRSLIFSRKKDGDTGSKLYSID 422
            +PS  G   +F+    GD  ++++S  
Sbjct: 561 VAPSPVGN--LFATG-SGDMRARIWSYS 585



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 17/158 (10%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA------- 307
             S++   RFS++GK                 D+QS      L +   ++          
Sbjct: 282 HDSVVCCVRFSNDGKFVA----TGCNRSAQIFDVQSGQLVTSLQDDSVLDKEGDLYIRSV 337

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD   +   ++    +Q+ V        K I    E   +   ++  G  IA     
Sbjct: 338 CFSPDGRYLATGAE---DKQIRVWDIQKRTIKHIFSGHEQDIYSLDFARNGRYIASGSGD 394

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  ++  DG QE +L  +  +     SP GR + 
Sbjct: 395 KTVRLWDIV--DGKQELILSIEDGVTTVAISPDGRFVA 430


>gi|221111712|ref|XP_002157810.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 1496

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 74/225 (32%), Gaps = 10/225 (4%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
              S + +  +     +   ++      D  +    +SP+ Q +A       D  +V + +
Sbjct: 948  GSSTLGQLLVWEWQSETYVLKQQGHFYDMNVM--AYSPDGQFIA----TGGDDGKVKMWN 1001

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            T             + I    FS NGK  +++   D  +  + ++ +       T+    
Sbjct: 1002 TISGFCFVTFHEHSAGISGVEFSQNGK-VIVTSSLDGTVRAFDLN-RYRNFRTFTSPRPA 1059

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                S S DSS  +  +      ++++          I    E       +SP   ++  
Sbjct: 1060 Q-FCSLSLDSSGEIVCAGSLDTFEIFMWSMQTGRLLEILSGHEGPVSCLAFSPIKAMLVS 1118

Query: 364  TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
              +        V  +   +E + +  SN+ A  + P G  +  S 
Sbjct: 1119 GSWDNTVRLWNVYDQTSPKETITI-GSNVTAIAFRPDGYEIAVSA 1162



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 43/143 (30%), Gaps = 26/143 (18%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
             + +       +  +    +  +    FSP +  +   ++D+     V L +     +PK
Sbjct: 1082 EIFMWSMQTGRLLEILSGHEGPVSCLAFSPIKAMLVSGSWDN----TVRLWNVYDQTSPK 1137

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-------------SVDLQSN------ 292
                  S + A  F  +G    +S   D  +  +               DL +       
Sbjct: 1138 ETITIGSNVTAIAFRPDGYEIAVSA-LDGEIKFWQPNILMEVGSIEGRKDLGTGRKKTDL 1196

Query: 293  -ATERLTNTLFINISASYSPDSS 314
               + LT+      S  YS D  
Sbjct: 1197 VTAKHLTSGRCF-TSLCYSADGQ 1218



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 46/142 (32%), Gaps = 8/142 (5%)

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            G   L+         +Y +         L+ T     S + S  S  + F S   G+  +
Sbjct: 899  GNSILVVGFSSGIFMLYEMP-DFIQIHSLSITQHKINSIAISNTSEWLAFGSSTLGQLLV 957

Query: 329  YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV- 387
            +  QS     K+  Q          +SP G  IA     G+   + +         +   
Sbjct: 958  WEWQSETYVLKQ--QGHFYDMNVMAYSPDGQFIA---TGGDDGKVKMWNTISGFCFVTFH 1012

Query: 388  -EDSNLQAPTWSPSGRSLIFSR 408
               + +    +S +G+ ++ S 
Sbjct: 1013 EHSAGISGVEFSQNGKVIVTSS 1034


>gi|60679693|ref|YP_209837.1| putative exported dipeptidyl peptidase IV [Bacteroides fragilis
           NCTC 9343]
 gi|60491127|emb|CAH05875.1| putative exported dipeptidyl peptidase IV [Bacteroides fragilis
           NCTC 9343]
          Length = 719

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/270 (17%), Positives = 99/270 (36%), Gaps = 58/270 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDT---------------RIDRAPKRIGNFRS----- 258
           +SP+   +A+   D   + +  L+D                 +     ++G +       
Sbjct: 200 WSPSGNLLAFYRMDQSMVAQYPLVDVTAPIAEVNNIRYPMAGMTSHQVKVGIYNPTTGKS 259

Query: 259 ---MILAP--------RFSSNGKRA-LISVQKDEA-MDIYSVDLQSNATERLTNTLFIN- 304
                  P         ++ + K   LI + +++    +   D+++     LT TLF   
Sbjct: 260 IYLNAGDPTDRYFTNISWAPDEKSLYLIELNRNQNHAKLCRYDVETGE---LTATLFEEK 316

Query: 305 ----ISAS----YSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
               +       + P D+S+ +++S ++G   LY+  +NG   +++++         V  
Sbjct: 317 SDKYVEPQDPIIFLPWDNSKFIYQSQKDGFSHLYLYDTNGRQIRQLTEGD--WLVKEVLG 374

Query: 356 PQGDL----IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                    IA T+FS  +  +  +         L     + +   SPSGR LI  +   
Sbjct: 375 FDTKKKEIIIASTEFSPLQNNLFRLDTKTGTRTPLGSAEGVHSGQLSPSGRYLI-DQYNS 433

Query: 412 GDTGSKLYSIDL-NGRNETLINTPAYASDP 440
                 +  ID+ +G++  L+     A+DP
Sbjct: 434 PTVPRSINIIDVQSGKSVNLLT----AADP 459



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 56/188 (29%), Gaps = 10/188 (5%)

Query: 211 DQILFEPRFSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APR---- 264
           D+      ++P+++ +       +++  ++   D         +   +S     P+    
Sbjct: 269 DRYFTNISWAPDEKSLYLIELNRNQNHAKLCRYDVETGELTATLFEEKSDKYVEPQDPII 328

Query: 265 FSS-NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDR 322
           F   +  + +   QKD    +Y  D       +LT   ++      +     +I+  S  
Sbjct: 329 FLPWDNSKFIYQSQKDGFSHLYLYDTNGRQIRQLTEGDWLVKEVLGFDTKKKEIIIASTE 388

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKK-DG 380
               Q  + + +     R              SP G  +     S      I ++    G
Sbjct: 389 FSPLQNNLFRLDTKTGTRTPLGSAEGVHSGQLSPSGRYLIDQYNSPTVPRSINIIDVQSG 448

Query: 381 SQERLLVE 388
               LL  
Sbjct: 449 KSVNLLTA 456


>gi|312886244|ref|ZP_07745858.1| conserved hypothetical protein [Mucilaginibacter paludis DSM 18603]
 gi|311301269|gb|EFQ78324.1| conserved hypothetical protein [Mucilaginibacter paludis DSM 18603]
          Length = 938

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 67/177 (37%), Gaps = 15/177 (8%)

Query: 268 NGKRALISVQKD------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-S 320
           +GK    S + D      +  +I  +D+Q+    R+T       S + + D  +IV    
Sbjct: 353 DGKIIYSSYRPDLRWSYRDYQEITLLDVQTGDETRITKKTKY-FSPALNADGKKIVAVQV 411

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +GK QL+++  +G     I  +    +  P +     +I+  +    + +I ++    
Sbjct: 412 AADGKNQLHILGLDGKVLHTIPNNDGLFFTYPKFYGD-KIISAVRKPDGEMSIALIDPGT 470

Query: 381 SQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                L+  S   +  P+       + FS          L+++ L+ +    + + +
Sbjct: 471 GNTEYLLAFSIKPIAFPSVHKD--MVYFSAATG--KNDALFALSLSNKKLYRLQSDS 523



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 59/165 (35%), Gaps = 12/165 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+   KN L ++  DG  +  +  +       P+F     K+  A    +  + + L+D 
Sbjct: 411 VAADGKNQLHILGLDGKVLHTIPNNDGLFFTYPKFY--GDKIISAVRKPDGEMSIALIDP 468

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-----LTN 299
                   +      I  P    +      S    +   ++++ L +    R     L+ 
Sbjct: 469 GTGNTEYLLAFSIKPIAFPSVHKD--MVYFSAATGKNDALFALSLSNKKLYRLQSDSLSA 526

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           ++    SA  S   ++I + S      Q++   S+    ++I+ D
Sbjct: 527 SIGNYQSAISS---NKIAWVSFTAYGYQVHQADSSQVQWQQITGD 568



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 51/133 (38%), Gaps = 17/133 (12%)

Query: 308 SYSPDSSQIVFESDRE--------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            +  D     F  D              ++V++++  +Q+R+   +  S  +      G 
Sbjct: 298 HFIGDQEYPAFVDDHTIIYNKTTYNHPAVFVIRTD--NQERVISSRNFSLDNYFDYHDGK 355

Query: 360 LIAFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +I  +     ++       I ++      E  + + +   +P  +  G+ ++ + +   D
Sbjct: 356 IIYSSYRPDLRWSYRDYQEITLLDVQTGDETRITKKTKYFSPALNADGKKIV-AVQVAAD 414

Query: 414 TGSKLYSIDLNGR 426
             ++L+ + L+G+
Sbjct: 415 GKNQLHILGLDGK 427


>gi|322435282|ref|YP_004217494.1| peptidase S9B dipeptidylpeptidase IV domain protein [Acidobacterium
           sp. MP5ACTX9]
 gi|321163009|gb|ADW68714.1| peptidase S9B dipeptidylpeptidase IV domain protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 783

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 57/420 (13%), Positives = 123/420 (29%), Gaps = 90/420 (21%)

Query: 81  LISQDSFKQKITNPDSIPRF----------------QDWNSLGAQVLVTGRVIKEGKDRL 124
            I   S    + +P  +  F                  W   G +  V   +     D  
Sbjct: 28  PIWAQSLPGNLPSPAFVQGFDKLYKTRGFRARTPAESRWLDGGERYTV---LETPAPDAK 84

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV-SES 183
            +E   ++    K    +    +         T    +         D  S + F  S+ 
Sbjct: 85  SLELVAYETATGK----RSVLVTEKQLTPEGATAPIQVEDY--AWSADKQSLLFFTNSKK 138

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILRVYLM 242
           V     +    V++  G+ +  L  +          FSP+ + V Y   ++     +Y+ 
Sbjct: 139 VWRQNTRGDYWVLNLQGSKLTKLGGTAAPSTLMFTQFSPDARSVGYVRENN-----IYVQ 193

Query: 243 DTRIDRAPKRIGNFRSMIL----------------APRFSSNGKRALIS-VQKDEAMDIY 285
           D       +   +  + I+                A R+S + +        +    D  
Sbjct: 194 DLATGTIRQLTTDGSADIINGTSDWVNEEELDIREAFRWSPDSRSIAYWQFDQSGVSDYT 253

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            ++  +    +L +  +  +        +     S R G     V+  +G     +    
Sbjct: 254 LINDTAANYPQLFHYKYPLV-------GTTNA--SVRAG-----VVSVDGGATHWMKLPG 299

Query: 346 EA-SYFDPV--WSPQGDLIA--FTKFSGEKFAIGVMKKDGSQERLLVEDSN--------- 391
           +  +++ P   W+     +A  +         I +      + + L ED +         
Sbjct: 300 DYRNHYIPRLDWADNSQQVAVEYLNRQQNDDLIFLADAATGEAKPLFEDKDDAYLDVDMS 359

Query: 392 ---LQAPTWSPSGRS-------LIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDP 440
              +    W P+  +       L++  ++DG   +  Y +    G+ E L N PA   +P
Sbjct: 360 AKIMSHFVWLPASHANTKEKPDLLWLSERDGWRHA--YRVSRQTGKLELLTNFPADVIEP 417



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/305 (16%), Positives = 100/305 (32%), Gaps = 72/305 (23%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRD----------------QILFEPRFSPNQ 223
                V  + +N++ V D     IR LT                     I    R+SP+ 
Sbjct: 177 PDARSVGYVRENNIYVQDLATGTIRQLTTDGSADIINGTSDWVNEEELDIREAFRWSPDS 236

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRSMILAPRFSSNGKRALISV 276
           + +AY  +D   +    L++      P+        +G   + + A   S +G       
Sbjct: 237 RSIAYWQFDQSGVSDYTLINDTAANYPQLFHYKYPLVGTTNASVRAGVVSVDG------- 289

Query: 277 QKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIV--FESDREGKEQLYVMQ 332
               A     +          RL           ++ +S Q+   + + ++  + +++  
Sbjct: 290 ---GATHWMKLPGDYRNHYIPRL----------DWADNSQQVAVEYLNRQQNDDLIFLAD 336

Query: 333 SNGSDQKRISQDKEASYFDPVWS--------------------PQGDLIAFTKFSGEKFA 372
           +   + K + +DK+ +Y D   S                    P   L+  ++  G + A
Sbjct: 337 AATGEAKPLFEDKDDAYLDVDMSAKIMSHFVWLPASHANTKEKPD--LLWLSERDGWRHA 394

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSIDLNGRNETL 430
             V ++ G  E L    +++  P  S   +     F+        + LY   L+G+    
Sbjct: 395 YRVSRQTGKLELLTNFPADVIEPV-SVDEQHGFFYFTASPSDPIRAYLYRSRLDGKGVPE 453

Query: 431 INTPA 435
             TPA
Sbjct: 454 RVTPA 458


>gi|71655415|ref|XP_816294.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70881411|gb|EAN94443.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 530

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 62/201 (30%), Gaps = 19/201 (9%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V L      +        R +++    S +GK    +  KD+ M I+  D        +
Sbjct: 260 SVALRSLVTGKEEGIFTGHRDLVICTAVSPDGKYLA-TTSKDQTMLIW--DATITKVLHI 316

Query: 298 TNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                + I   +SPDS+ +V      G       +       ++              +S
Sbjct: 317 LRHGMVVICCCFSPDSNTVV-----SGCQDRVCRLWDVRKGKERVAYSKHAGIIVSVAFS 371

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--------FS 407
           P G  +  T  +     +       +  RL      + A +++  G+ +I          
Sbjct: 372 PDGKYVCSTS-ADRTLHVWSATTGNTYLRLNGHVGIVLACSYTSDGKYIISNDETHLCVW 430

Query: 408 RKKDGDTGSKLYSIDLNGRNE 428
              DG    +L   +L G+  
Sbjct: 431 SAADGSCQLRLAVTELAGKPR 451



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 48/273 (17%), Positives = 91/273 (33%), Gaps = 36/273 (13%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKN--------SLCVMDRDGANIRYLTPSRDQILFEPRF 219
            E+G F      V  + VS   K         ++ + D     + ++      ++    F
Sbjct: 270 KEEGIFTGHRDLVICTAVSPDGKYLATTSKDQTMLIWDATITKVLHILRHGMVVICC-CF 328

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   V     D        L D R  +          +I++  FS +GK    S   D
Sbjct: 329 SPDSNTVVSGCQDR----VCRLWDVRKGKERVAYSKHAGIIVSVAFSPDGKYVC-STSAD 383

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--------SDREGKEQLYVM 331
             + ++S     N   RL   + I ++ SY+ D   I+          S  +G  QL + 
Sbjct: 384 RTLHVWSA-TTGNTYLRLNGHVGIVLACSYTSDGKYIISNDETHLCVWSAADGSCQLRLA 442

Query: 332 QSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +      +  S+  + ++     +P G    +   +     + ++      E+      
Sbjct: 443 VTELAGKPRGTSRAGKLAWTSSCAAP-GAFTRYMAVACTNRFVYILDICNGSEQ---SSV 498

Query: 391 NLQAPTWSPSGRS---LIFSRKKDGDTGSKLYS 420
             +AP +  +G     + F     GD    LY 
Sbjct: 499 FCKAPVYCLAGGYKEKIAF-----GDNFGNLYV 526


>gi|296284513|ref|ZP_06862511.1| dipeptidyl aminopeptidase [Citromicrobium bathyomarinum JL354]
          Length = 656

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 3/97 (3%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---KKDGSQERLLVEDSNLQAP 395
            R S     +      SP G  I++   S     + +      D ++      D  ++  
Sbjct: 14  PRESLFGNPTRAGGQISPDGKWISWLAPSNGVLNVWMAPADDLDNAKVMTKATDRPIRQY 73

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            W+P   SL++ + K GD    LY +++    ET + 
Sbjct: 74  FWAPDSASLLYIQDKGGDENFLLYGVNVETGVETTLT 110



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 17/133 (12%), Positives = 45/133 (33%), Gaps = 11/133 (8%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS----NATERLTNTLFINISASYSPDSSQIVFESD 321
           S +GK        +  ++++              + T+         ++PDS+ +++  D
Sbjct: 30  SPDGKWISWLAPSNGVLNVWMAPADDLDNAKVMTKATDRPIRQY--FWAPDSASLLYIQD 87

Query: 322 REGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSP---QGDLIAFTKFSGEKFAIGVM 376
           + G E   LY +      +  ++  +         S       LI       +   + ++
Sbjct: 88  KGGDENFLLYGVNVETGVETTLTDFENTRVMVVGGSDRIKDKILIGLNNRDPQYHDVYML 147

Query: 377 KKDGSQERLLVED 389
             +  +   L+E+
Sbjct: 148 DLNTGELTELIEN 160


>gi|282163797|ref|YP_003356182.1| hypothetical protein MCP_1127 [Methanocella paludicola SANAE]
 gi|282156111|dbj|BAI61199.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 329

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/302 (13%), Positives = 87/302 (28%), Gaps = 56/302 (18%)

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
            V  +G         +  RLWD++   Q+                H     + +      
Sbjct: 59  AVSPDGKAALSGGTDMVVRLWDLEKGAQL----------------HAFEGHVNE------ 96

Query: 171 GDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
               S + F   E+ VSG   N+L + D      +++    D  +     S + +   YA
Sbjct: 97  ---VSAVAFAGGETAVSGGWDNTLRIWDLKAGVRKHIIRGFDFYVRSVAVSADGR---YA 150

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                D    Y+ D       ++I    +++    F+ +     +S   D+++ +     
Sbjct: 151 LAGCGDKTVRYI-DLETGDTIQKITGHNNVVSCVAFAGD---LAVSGSWDKSIALNEA-R 205

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDK 345
                           S         I    DR     G   +           +  +  
Sbjct: 206 TGKYIRSFDGHEGYVYS---------IAVHGDRLLSGSGDMTVKYWDIGTGQCLKTLKGH 256

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRS 403
                   ++P G    +   +G    + +   +  Q  + +   D  +     SP GR 
Sbjct: 257 MDHVKAVAFTPDGK---YAVSAGADKFLKIWDVESGQCLQTIRAHDDTINTVAVSPDGRF 313

Query: 404 LI 405
           ++
Sbjct: 314 VL 315



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 71/235 (30%), Gaps = 30/235 (12%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDR--KQIIGK-----KFFSSPASWRKIAHTISD 160
              +                 R+WD+K    K II       +  +  A  R       D
Sbjct: 97  VSAVAFAGGETAVSGGWDNTLRIWDLKAGVRKHIIRGFDFYVRSVAVSADGRYALAGCGD 156

Query: 161 DIYQSITGEKGDFNSRI----------LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
              + I  E GD   +I           F  +  VSG    S+ + +             
Sbjct: 157 KTVRYIDLETGDTIQKITGHNNVVSCVAFAGDLAVSGSWDKSIALNEARTGKYIRSFDGH 216

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +  ++      ++             + V   D    +  K +      + A  F+ +GK
Sbjct: 217 EGYVYSIAVHGDR------LLSGSGDMTVKYWDIGTGQCLKTLKGHMDHVKAVAFTPDGK 270

Query: 271 RALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDRE 323
              +S   D+ + I+  D++S         +   IN  A  SPD  + V    R+
Sbjct: 271 Y-AVSAGADKFLKIW--DVESGQCLQTIRAHDDTINTVAV-SPDG-RFVLTGSRD 320


>gi|224076540|ref|XP_002196078.1| PREDICTED: similar to notchless homolog 1 [Taeniopygia guttata]
          Length = 479

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 58/176 (32%), Gaps = 22/176 (12%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T + T       
Sbjct: 97  VTRCTSSLEGHTEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPQFTAKGHRHW 152

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQ-SNGSDQKRISQDKEASYFDPVW-----S 355
            +S ++SPD  ++       G    Q+++   + GS   R+            W     +
Sbjct: 153 VLSIAWSPDGKKLA-----SGCKNSQIFLWDPATGSQIGRVLSGHSKWITCLCWEPLHIN 207

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A     G    I         + L     ++    W   G  L++S  +D
Sbjct: 208 PECRYLASASKDGS-IRIWDTLMGRCDKILTSHTQSVTCVKWGGDG--LLYSSSQD 260



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 52/136 (38%), Gaps = 14/136 (10%)

Query: 232 DDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L     D+ P +R+   +++I    FS +  R + S   D+++ ++     
Sbjct: 340 SGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPD-TRIIASASFDKSIKLW----D 394

Query: 291 SNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
               + LT+    ++SA    ++S DS  +V  S       L V  +             
Sbjct: 395 GRTGKYLTSLRG-HVSAVYQIAWSADSRLLVSGSS---DSTLKVWDAKTKKLAVDLPGHA 450

Query: 347 ASYFDPVWSPQGDLIA 362
              +   WSP G  +A
Sbjct: 451 DEVYAADWSPDGQRVA 466



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 42/135 (31%), Gaps = 8/135 (5%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  + ++         ER+T    +     +SPD+  I   S     + + +  
Sbjct: 338 LVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASF---DKSIKLWD 394

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +   ++ +   WS    L+           + V      +  + +     
Sbjct: 395 GRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDST---LKVWDAKTKKLAVDLPGHAD 451

Query: 393 QAPT--WSPSGRSLI 405
           +     WSP G+ + 
Sbjct: 452 EVYAADWSPDGQRVA 466



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 56/178 (31%), Gaps = 16/178 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D      ++        +    +SP+ +K+A          +++L D  
Sbjct: 125 SGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLA----SGCKNSQIFLWDPA 180

Query: 246 IDRAPKRIGNFRSMILA-----P-RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                 R+ +  S  +      P   +   +    S  KD ++ I+   L     + LT+
Sbjct: 181 TGSQIGRVLSGHSKWITCLCWEPLHINPECRYLA-SASKDGSIRIWDT-LMGRCDKILTS 238

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                    +  D   +++ S ++    + V +S      R  Q           S  
Sbjct: 239 HTQSVTCVKWGGDG--LLYSSSQD--RTIKVWRSQDGVLCRTLQGHAHWVNTMALSTD 292



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 12/107 (11%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            A  R T++L  +  A    ++SP    +   S   G   +     +    +  ++    
Sbjct: 95  RAVTRCTSSLEGHTEAVISVAFSPTGKYLASGS---GDTTVRFWDLSTETPQFTAKGHRH 151

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNL 392
                 WSP G  +A      +   I +       +  R+L   S  
Sbjct: 152 WVLSIAWSPDGKKLA---SGCKNSQIFLWDPATGSQIGRVLSGHSKW 195



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 30/78 (38%), Gaps = 6/78 (7%)

Query: 198 RDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            DG   +YLT        +++  +S + + +   + D      + + D +  +    +  
Sbjct: 393 WDGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDS----TLKVWDAKTKKLAVDLPG 448

Query: 256 FRSMILAPRFSSNGKRAL 273
               + A  +S +G+R  
Sbjct: 449 HADEVYAADWSPDGQRVA 466


>gi|134081244|emb|CAK41751.1| unnamed protein product [Aspergillus niger]
          Length = 380

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/324 (13%), Positives = 105/324 (32%), Gaps = 52/324 (16%)

Query: 63  GKVSEVVSKDLQRSDV-FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK 121
            +++++V   L  S + F      +  ++I   +       W S G ++L +G       
Sbjct: 44  AQIADMVLLQLYSSGLIFAPY--KALIREIYERE----LPTWLSRGPKLLASGS-----D 92

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
           D+     +LWD                 + + I    S  +Y       G          
Sbjct: 93  DK---TIKLWDAATG-------------TLKHILEGHSGLVYSVAFLNNG---------- 126

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + + SG    ++ + D     +++   +    ++   FS N Q +A ++        + L
Sbjct: 127 QLLASGSGNKTIKLWDAATGALKHTLENHSNPVYSVAFSNNGQLLASSS----GNKTIKL 182

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
            +         +    + + +  FS N ++ L S  +D+ + ++  +  + A +  L   
Sbjct: 183 WNAATGALKHTLEGHSNPVYSVAFS-NNRQLLASGSRDKTIKLW--NTATGALKHTLKGY 239

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++S +   +   S     + + +  +     K   +      +   +S    L
Sbjct: 240 SNWVYSVAFSNNGQLLASGSY---DKTIKLWNAATGALKYTLEGHSNPVYSVAFSNNRQL 296

Query: 361 IAFTKFSGEKFAIGVMKKDGSQER 384
           +A          I +        +
Sbjct: 297 LASGSHDKT---IKLWDAATGALK 317



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 49/125 (39%), Gaps = 7/125 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + +     +++        ++   FS N Q +A  +YD      + L +  
Sbjct: 215 SGSRDKTIKLWNTATGALKHTLKGYSNWVYSVAFSNNGQLLASGSYDK----TIKLWNAA 270

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +    + + +  FS N ++ L S   D+ + ++  D  + A +   +T  +  
Sbjct: 271 TGALKYTLEGHSNPVYSVAFS-NNRQLLASGSHDKTIKLW--DAATGALKHDISTNNMAT 327

Query: 306 SASYS 310
           S  +S
Sbjct: 328 SVEFS 332


>gi|29831107|ref|NP_825741.1| peptidase [Streptomyces avermitilis MA-4680]
 gi|29608221|dbj|BAC72276.1| putative peptidase [Streptomyces avermitilis MA-4680]
          Length = 613

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/330 (12%), Positives = 90/330 (27%), Gaps = 44/330 (13%)

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQV--LVTGRVIKEGKDRLRVEFRLWDVKD 135
            F          +       P +    ++G      V GR   E    + V      V+ 
Sbjct: 106 RFTGGGTADGPDEPAADGLEPSYPAGLAIGRDGGTAVVGRSTDEDGSTVHV------VRA 159

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            ++ +        A    ++H                 +  ++ V  +     + ++L V
Sbjct: 160 GQEPVEIYRHRESAGVGDLSH-----------------DGSLIAVEHTEHGDAMHSALRV 202

Query: 196 MDRDGANIRYLTPSRDQILFEP----RFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           +  DG+ +  L  ++   +        F+P +        +         + D       
Sbjct: 203 LRLDGSTVAELDDTKGGSVELGLEVLGFAPVDGDTRLLIGHQRRGRWEPLVWDVASGEET 262

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                    + A  +  +G   L++   +   +++  DL S    R+         A+  
Sbjct: 263 DLALELPGDVGA-EWYPDGSALLVAHSFEARSELFRYDLASRELVRVPTPAGTVSGATAR 321

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSG 368
           PD S     S            +      R +          + SP    +   + +  G
Sbjct: 322 PDGSVEYLWS-----------SAAEPSVVRSTSGGIVLDPPGMKSPGSVPVEDVWVEGPG 370

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            +    V +  G+   L         PTW 
Sbjct: 371 GRVHALVQRPAGASGPLPTVFDIHGGPTWH 400



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 56/179 (31%), Gaps = 11/179 (6%)

Query: 260 ILAPRFSSNG-KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +  P ++ +   RAL         ++Y+ D  +    ++T+          SPD   I +
Sbjct: 31  VSLPDWAEDAPHRALFVSNATGTYELYAWDRTTGEQRQVTDRPNGTTDGVLSPDGEWIWW 90

Query: 319 ESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSP--------QGDLIAFTKFSGE 369
             D +G E  ++  Q           D+ A+       P         G  +       +
Sbjct: 91  FDDTDGDEFGIWRRQRFTGGGTADGPDEPAADGLEPSYPAGLAIGRDGGTAVVGRSTDED 150

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRN 427
              + V++       +     +      S  G  +     + GD   S L  + L+G  
Sbjct: 151 GSTVHVVRAGQEPVEIYRHRESAGVGDLSHDGSLIAVEHTEHGDAMHSALRVLRLDGST 209



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/268 (13%), Positives = 75/268 (27%), Gaps = 35/268 (13%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +    R   +  P ++ +    A    +      +Y  D R     +++ +  +    
Sbjct: 20  PDWEKRFRAPRVSLPDWAEDAPHRALFVSNATGTYELYAWD-RTTGEQRQVTDRPNGTTD 78

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---------SASYSP-- 311
              S +G+        D               +R T     +            SY    
Sbjct: 79  GVLSPDGEWIWWFDDTDGDEFGIW------RRQRFTGGGTADGPDEPAADGLEPSYPAGL 132

Query: 312 ----DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
               D    V     +       +   G +   I + +E S      S  G LIA     
Sbjct: 133 AIGRDGGTAVVGRSTDEDGSTVHVVRAGQEPVEIYRHRE-SAGVGDLSHDGSLIAVEHTE 191

Query: 368 GEK---FAIGVMKKDGSQERLL--VEDSNL----QAPTWSP-SG-RSLIFSRKKDGDTGS 416
                  A+ V++ DGS    L   +  ++    +   ++P  G   L+   ++ G    
Sbjct: 192 HGDAMHSALRVLRLDGSTVAELDDTKGGSVELGLEVLGFAPVDGDTRLLIGHQRRGRWEP 251

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVG 444
            ++ +      +  +  P      +W  
Sbjct: 252 LVWDVASGEETDLALELPGDVGA-EWYP 278


>gi|71001112|ref|XP_755237.1| secreted dipeptidyl peptidase DppV [Aspergillus fumigatus Af293]
 gi|229485355|sp|P0C959|DPP5_ASPFU RecName: Full=Dipeptidyl-peptidase 5; AltName:
           Full=Dipeptidyl-peptidase V; Short=DPP V; Short=DppV;
           Flags: Precursor
 gi|66852875|gb|EAL93199.1| secreted dipeptidyl peptidase DppV [Aspergillus fumigatus Af293]
          Length = 721

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/306 (17%), Positives = 101/306 (33%), Gaps = 54/306 (17%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD----GANIRYLTPSRDQILFEPRFS 220
           S++      +  IL+V+ +         L V        G     L  S   +      S
Sbjct: 78  SVSEIVWLSDDSILYVNSTNADIPGGVELWVTQASSFAKGYKAASLPASFSGLKTAKTKS 137

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----FRSMILAPRFSSNGKRALIS- 275
            + + VAY             + T    + +   +         L+  F      A+ S 
Sbjct: 138 GDIRFVAYGQSYPNGTAYNEELATAPLSSARIYDSIYVRHWDYWLSTTF-----NAVFSG 192

Query: 276 -VQKDEAMDIYSVDLQSNATERLTNTLFINISA----------SYSPDSSQIVFESDREG 324
            ++K    + YS+D      + L + +    S             SPD   + F+S    
Sbjct: 193 TLKKGHGKNGYSLD---GELKNLVSPVKNAESPYPPFGGASDYDLSPDGKWVAFKSKAPE 249

Query: 325 KEQ-------LYVMQSNGSDQKRISQDKE---------ASYFDPVWSPQGDLIAFTKFSG 368
             +       +Y++  + S+  R     +              PV+SP GD +A+ +   
Sbjct: 250 LPKANFTTSYIYLVPHDASETARPINGPDSPGTPKGIKGDSSSPVFSPNGDKLAYFQMRD 309

Query: 369 EKFA-----IGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYS 420
           E +      + V      +    V     ++P    W+P G++LI   +  G T  +L+S
Sbjct: 310 ETYESDRRVLYVYSLGSKKTIPSVAGDWDRSPDSVKWTPDGKTLIVGSEDLGRT--RLFS 367

Query: 421 IDLNGR 426
           +  N +
Sbjct: 368 LPANAK 373


>gi|325087655|gb|EGC40965.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
          Length = 1407

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 75/206 (36%), Gaps = 22/206 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ Q +A  ++ D+    + L D +       +      +++  FS +G+  + S   D
Sbjct: 797 SPDGQFLACTSHFDDK---IRLWDLKRIAIHSTLEGHVDYVISIAFSPDGEYIV-STSLD 852

Query: 280 EAMDIYSVD------LQSNATERL---TNTLFINISAS---YSPDSSQIVFESDREGKEQ 327
           +++ ++ V       L S  ++ L   + +L      +   +SP+   I       G +Q
Sbjct: 853 KSIRLWEVKKGRSKILFSGKSDLLLEKSQSLSFETRTNGTIFSPNGEFIAGYIHGLGHDQ 912

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERL 385
           + +  +  +     +           +S  G  IA +  S     I   +          
Sbjct: 913 VQLWDAKTNCLVG-TLPHPRFILALAFSYDGKFIA-SACSDGTVRIWDPRTATLCGILTQ 970

Query: 386 LVED-SNLQAP-TWSPSGRSLIFSRK 409
           +    ++  +P  +SP G+S+     
Sbjct: 971 VKSGYADCISPFAFSPDGQSIACISH 996



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 72/220 (32%), Gaps = 16/220 (7%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPK--RI 253
            I          +    FSP+ + +   +       ++ +      L   + D   +  + 
Sbjct: 823  IHSTLEGHVDYVISIAFSPDGEYIVSTSLDKSIRLWEVKKGRSKILFSGKSDLLLEKSQS 882

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPD 312
             +F +      FS NG+     +       +   D ++N     L +  FI ++ ++S D
Sbjct: 883  LSFETRTNGTIFSPNGEFIAGYIHGLGHDQVQLWDAKTNCLVGTLPHPRFI-LALAFSYD 941

Query: 313  SSQIVFESDREGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
               I   +  +G  +++  ++        ++            +SP G  IA        
Sbjct: 942  GKFIA-SACSDGTVRIWDPRTATLCGILTQVKSGYADCISPFAFSPDGQSIACISH--GA 998

Query: 371  FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              I  +K       +  +   +   T+SP  R L  +  +
Sbjct: 999  VEIWDLKSLSLCGTIENDTEAITCITFSPDSRLLAAASGR 1038



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 74/257 (28%), Gaps = 22/257 (8%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
            + + +      +S   W  +   I   I Q+   E   F     +V   +     +    
Sbjct: 1069 NGQFVASGSLDNSVRLWDTMGLGIPSSIIQTHISE-IKFTGSGHYVVSYLSDETTELR-- 1125

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
              D       +  P   Q   +  FSP    +AY   D      V L +    +    + 
Sbjct: 1126 --DPSTGVPMFTLPDFLQFSDKVEFSPVNNLLAYTDDDT-----VNLWNMATRKFYGSLT 1178

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDS 313
                ++    FS +G    +S Q      I   DL       +      ++    YS D 
Sbjct: 1179 ITDRVVKTIAFSPDGNDLAVSYQ---NHAIVIWDLMIKKRRYVLKGHADDVYKLEYSSDG 1235

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSG 368
              +V  S     + L +      +   +   ++   +D   S     I      F     
Sbjct: 1236 HLLVSASR---DDSLRLWDPATGELIGLLGRRKGRIWDMAVSSDAKAIICISGHFVTVWD 1292

Query: 369  EKFAIGVMKKDGSQERL 385
                +  M+ D   +++
Sbjct: 1293 SNTKLIKMELDLKDKQV 1309



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 57/186 (30%), Gaps = 39/186 (20%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----SYSPDSSQIVF 318
            FS +G   + S        I + D  + A       +  +  A       SPD   +  
Sbjct: 750 SFSPDGDFLISS----GGNLINAWDTTTGAFRYAIPDISQSTFALKRQEVLSPDGQFLAC 805

Query: 319 ESDREGKEQLYVMQSNGSDQKRI----SQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAI 373
            S  + K +L+       D KRI    + +    Y     +SP G+ I  T        I
Sbjct: 806 TSHFDDKIRLW-------DLKRIAIHSTLEGHVDYVISIAFSPDGEYIVSTSLDKS---I 855

Query: 374 GVMKKDGSQERLLVED---------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            + +    + ++L                  +      +SP+G  +       G    +L
Sbjct: 856 RLWEVKKGRSKILFSGKSDLLLEKSQSLSFETRTNGTIFSPNGEFIAGYIHGLGHDQVQL 915

Query: 419 YSIDLN 424
           +    N
Sbjct: 916 WDAKTN 921



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 50/139 (35%), Gaps = 24/139 (17%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQGDLIAF 363
           S+SPD   ++      G   +    +     +     ISQ   A     V SP G  +A 
Sbjct: 750 SFSPDGDFLI----SSGGNLINAWDTTTGAFRYAIPDISQSTFALKRQEVLSPDGQFLAC 805

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSK 417
           T    +K  +  +K      R+ +  +            +SP G  ++ +     D   +
Sbjct: 806 TSHFDDKIRLWDLK------RIAIHSTLEGHVDYVISIAFSPDGEYIVSTSL---DKSIR 856

Query: 418 LYSIDLNGRNETLINTPAY 436
           L+ +   GR++ L +  + 
Sbjct: 857 LWEVK-KGRSKILFSGKSD 874


>gi|256053273|ref|XP_002570123.1| transducin beta-like [Schistosoma mansoni]
 gi|227287499|emb|CAY17852.1| transducin beta-like [Schistosoma mansoni]
          Length = 689

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 61/179 (34%), Gaps = 19/179 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                +  +   ++ PN + +A  + D      + + D   DR    +      I   ++
Sbjct: 519 TFQGHENEVNAIKWDPNGRLLASCSDDM----TLKVWDMHHDRCVHDLRGHTKEIYTIKW 574

Query: 266 SSNGKRALI--------SVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQI 316
           S  G             S   D  + ++  D+++    R L+       S ++SPD   +
Sbjct: 575 SPTGPGTAFANAPLCLASASFDSTVRLW--DVETGQCRRILSRHTEPVYSVAFSPDGRLL 632

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              S     + +++   +  +    S       F+  W+ +GD +  +   G    + +
Sbjct: 633 ATGSF---DQCVHIWNVDSGNLIN-SYQGTGGIFEVCWNSRGDKVGASASDGSVVVLDL 687



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 43/136 (31%), Gaps = 9/136 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-----DDEDILRVYLMDTRI 246
           +L V D       +      + ++  ++SP     A+A              V L D   
Sbjct: 547 TLKVWDMHHDRCVHDLRGHTKEIYTIKWSPTGPGTAFANAPLCLASASFDSTVRLWDVET 606

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +  + +      + +  FS +G+    +   D+ + I+  ++ S               
Sbjct: 607 GQCRRILSRHTEPVYSVAFSPDGRLLA-TGSFDQCVHIW--NVDSGNLINSYQGTGGIFE 663

Query: 307 ASYSPDSSQI-VFESD 321
             ++    ++    SD
Sbjct: 664 VCWNSRGDKVGASASD 679



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 46/159 (28%), Gaps = 25/159 (15%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-------DLQ 290
            +++         K      + + A ++  NG+    S   D  + ++ +       DL+
Sbjct: 505 NIHVCQLGCSSPVKTFQGHENEVNAIKWDPNGRLLA-SCSDDMTLKVWDMHHDRCVHDLR 563

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQD 344
            +  E  T          +SP      F       +       + +        +RI   
Sbjct: 564 GHTKEIYTI--------KWSPTGPGTAFANAPLCLASASFDSTVRLWDVETGQCRRILSR 615

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                +   +SP G L+A   F      + +   D    
Sbjct: 616 HTEPVYSVAFSPDGRLLATGSFDQ---CVHIWNVDSGNL 651



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 95/308 (30%), Gaps = 68/308 (22%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +    GD  +RI  + E V +      L +      + + +  ++D    +  ++ +   
Sbjct: 357 LASGSGDSTARIWNLEEPVANPHHVPQLVLTHWVNLDGQTVLSNKDVTSLD--WNSDGSF 414

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A  +YD     RV+  D    R    +G  +  I A +++  G   L +   D+   I+
Sbjct: 415 LATGSYD--GFARVWNTD---GRLATTLGQHKGPIFALKWNKKGNYIL-TAGVDKTTIIW 468

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQD 344
               Q+    R+      +++ +   D   +  F S       ++V Q   S   +  Q 
Sbjct: 469 E--AQTG---RIAQQFAFHVAPTLDVDWQSLDSFASCST-DTNIHVCQLGCSSPVKTFQG 522

Query: 345 KEASYFDPVWSPQGDLIA------------------FTKFSGEKFAIGVM---------- 376
            E       W P G L+A                       G    I  +          
Sbjct: 523 HENEVNAIKWDPNGRLLASCSDDMTLKVWDMHHDRCVHDLRGHTKEIYTIKWSPTGPGTA 582

Query: 377 --------------------KKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDT 414
                                 +  Q R ++      + +  +SP GR L        D 
Sbjct: 583 FANAPLCLASASFDSTVRLWDVETGQCRRILSRHTEPVYSVAFSPDGRLLA---TGSFDQ 639

Query: 415 GSKLYSID 422
              ++++D
Sbjct: 640 CVHIWNVD 647


>gi|156408371|ref|XP_001641830.1| predicted protein [Nematostella vectensis]
 gi|156228970|gb|EDO49767.1| predicted protein [Nematostella vectensis]
          Length = 292

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 80/225 (35%), Gaps = 18/225 (8%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG   +++ + D D  ++ +        +     +P+ +++  ++YD      V + D 
Sbjct: 71  VSGAFDHTVKIWDMDTLSLVHTLKGHKNWVSGVLVTPDSKRIISSSYDK----TVKIWDV 126

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFI 303
                   +      +     +S+G+R + S  +D  + I+  +L++      L      
Sbjct: 127 ETCAFVNSLDGHDGHVRGIAITSDGRRLV-SASQDRTLRIW--NLETFAHVSTLRGHSET 183

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                 SPD     F         + +     + + R      +  F    +P G  +  
Sbjct: 184 VYCVCCSPDDK---FAISGSEDTMVKIWDLESAKEVRSLVGHTSDIFAVAVTPDGSKVI- 239

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLI 405
              SG+   + V   +  +E L     + ++    T SP G +++
Sbjct: 240 --SSGDDTQVKVWSLESGEE-LASLHGHSESVRIVTVSPDGLTIV 281


>gi|78049750|ref|YP_365925.1| aminopeptidase precursor [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78038180|emb|CAJ25925.1| aminopeptidase precursor [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 789

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/213 (14%), Positives = 68/213 (31%), Gaps = 17/213 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVA--YATYDDEDILRVYLMDTRIDRAPK-RIGNF 256
           G     +    D       +S + + VA      D++D     +        P+ R+ + 
Sbjct: 324 GNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDLDNARLQPRHRLSDS 383

Query: 257 RSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             +        +  + +   +  ++     +Y+V+       + T   +       S D 
Sbjct: 384 AWISWDFNDFGWLPDNRTLWLLSEESGYSQLYTVEGNGK-PRQRTRGKWEVSMPVASADG 442

Query: 314 SQIVFESDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           S + F  +++  G  ++  +         I+       F    SP G  +   ++SG   
Sbjct: 443 SGMFFLCNQKWPGDYEVCKLDLRNDQLTEITALNGVEGF--SLSPNGQQLL-VRYSGSYL 499

Query: 372 --AIGVMKKDGSQERLLVEDSNLQA---PTWSP 399
              + V+   G Q  +L +         P  +P
Sbjct: 500 PTQLAVVPATGGQATVLTDTRTAAFKAQPWIAP 532



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 76/246 (30%), Gaps = 38/246 (15%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    +  + +   SP+ + +   T   +        + +  + P+ +            
Sbjct: 218 VYLGDEVEIVDSALSPDGRHLLVVTQAKK------ADEGQAGKMPRYVTESGYEEFQEV- 270

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDRE 323
                R  +      A  ++ VD+ +     L+      I                + R+
Sbjct: 271 -----RTRVGRNAPAAHALWLVDVGAGTARSLSFDPLPGIATDP----------LAALRK 315

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGS 381
             ++       G+   R+  D + S     WS  G  +A        +   I  +  D +
Sbjct: 316 AAKRD---PLKGNRAVRVESDGDGSGPAVHWSDDGRNVAVEIRAVDNKDRWIASVDLDNA 372

Query: 382 QER---LLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           + +    L +      +     W P  R+L    ++ G   S+LY+++ NG+        
Sbjct: 373 RLQPRHRLSDSAWISWDFNDFGWLPDNRTLWLLSEESG--YSQLYTVEGNGKPRQRTRGK 430

Query: 435 AYASDP 440
              S P
Sbjct: 431 WEVSMP 436



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 62/191 (32%), Gaps = 17/191 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-------PNQQKV 226
           + R + V    V    +    +   D  N R     R        +        P+ + +
Sbjct: 346 DGRNVAVEIRAVDNKDR---WIASVDLDNARLQPRHRLSDSAWISWDFNDFGWLPDNRTL 402

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDI 284
              + +        L     +  P++    +  +  P  S++G        +      ++
Sbjct: 403 WLLSEESG---YSQLYTVEGNGKPRQRTRGKWEVSMPVASADGSGMFFLCNQKWPGDYEV 459

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQ 343
             +DL+++    +T    +    S SP+  Q++          QL V+ + G     ++ 
Sbjct: 460 CKLDLRNDQLTEITALNGVEGF-SLSPNGQQLLVRYSGSYLPTQLAVVPATGGQATVLTD 518

Query: 344 DKEASYFDPVW 354
            + A++    W
Sbjct: 519 TRTAAFKAQPW 529



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 46/125 (36%), Gaps = 12/125 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--SMILA-PRFSSNGKRALI 274
            +  + ++V Y    D   +R            +R+ +     +  A P + +  +R L 
Sbjct: 44  WWQWDGKQVQYLLKRDGSPVRDTYRQGTGGGTAERVADTARAGLDAANPSYDATRQRMLF 103

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +   D    I+  DL++ A  +LT +        ++ D   I     R G    Y  +++
Sbjct: 104 ARNGD----IFLRDLRTGALTQLTRSNETESRPQFASDGGAIW----RAGNN-WYHWRAD 154

Query: 335 GSDQK 339
           G   +
Sbjct: 155 GGTAQ 159



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 44/146 (30%), Gaps = 18/146 (12%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              ++  A +  D  Q+ +   R+G      Y   + G   +R++    A       S  
Sbjct: 37  GPAVD-QAWWQWDGKQVQYLLKRDGSPVRDTYRQGTGGGTAERVADTARAGLDAANPSYD 95

Query: 358 GDL--IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDT 414
                + F +       I +          L   +  ++ P ++  G ++          
Sbjct: 96  ATRQRMLFARNGD----IFLRDLRTGALTQLTRSNETESRPQFASDGGAIW-------RA 144

Query: 415 GSKLYSIDLNGRNETLINTPAYASDP 440
           G+  Y    +G    +    A   DP
Sbjct: 145 GNNWYHWRADGGTAQVAVVKAE-RDP 169


>gi|269925238|ref|YP_003321861.1| RNA polymerase, sigma-24 subunit, ECF subfamily [Thermobaculum
           terrenum ATCC BAA-798]
 gi|269788898|gb|ACZ41039.1| RNA polymerase, sigma-24 subunit, ECF subfamily [Thermobaculum
           terrenum ATCC BAA-798]
          Length = 991

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 72/400 (18%), Positives = 124/400 (31%), Gaps = 78/400 (19%)

Query: 85  DSFKQKITNPDSIPRFQD--WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD------- 135
           D+   K T     P  +   W S  A       V         +   LW V         
Sbjct: 215 DTLSVKHTTFSMPPNLEARLWKSCSADFP-QQYVPPLAVGNDNIRVYLWAVAACIVLLFA 273

Query: 136 ---RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL-----FVSESVVSG 187
                   G    + P+  +     +SD   Q+++    D  S I      FV +  +SG
Sbjct: 274 AVLGANFFGIDSSAKPSQVKTAERLVSD---QNVSNRSDDSTSNIAARINGFVRDRYLSG 330

Query: 188 IIK--------NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            +         NS+ V+D D  NI     +          SP+ + +AY   D      V
Sbjct: 331 RLVLLHYGPDGNSVGVVDFDTGNIARDVFTDLSPNVVFAISPSGRYLAYGKQDA-----V 385

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L D      P+ +   +        S N  R             Y +D         T 
Sbjct: 386 MLSDIIDRSPPRWLITLQ--------SPNTDR-----------WRYEMDR--------TP 418

Query: 300 TLFINISASYSPDSSQIVFESD-------REGKEQLYVMQSNGSD--QKRISQDKEASYF 350
             F   + ++ P+   +   S+          + QL  ++++G +     ++        
Sbjct: 419 HRFRVAALAWHPNEQILAVASEPIYYRGLEHSRVQLVRVRNSGGETISTIVTLQSFEDVV 478

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              WS  G  +      G    I +          L +       TWSP  + +++    
Sbjct: 479 SLDWSADGTQLLI----GTDRRILLASFSRFGFWDLKQLPGRGTATWSPDDKLVLWVSPS 534

Query: 411 DGDTGSKLYSID--LNGRNETLIN--TPAYASDPQWVGFM 446
           D  +GS L+ +     G++ TL       +  DP +V F+
Sbjct: 535 DSASGSSLFGVTNPSTGKSSTLGTCDYARWEDDPNYVVFL 574



 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 77/253 (30%), Gaps = 51/253 (20%)

Query: 218 RFSPNQQKVA-------YATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNG 269
            + PN+Q +A       Y   +   +  V + ++  +     +       +++  +S++G
Sbjct: 427 AWHPNEQILAVASEPIYYRGLEHSRVQLVRVRNSGGETISTIVTLQSFEDVVSLDWSADG 486

Query: 270 KRALI---------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            + LI         S  +    D+  +  +                A++SPD   +++ S
Sbjct: 487 TQLLIGTDRRILLASFSRFGFWDLKQLPGRGT--------------ATWSPDDKLVLWVS 532

Query: 321 DREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---TKFSGEKFAIG 374
             +         V   +      +      +     W    + + F        ++  + 
Sbjct: 533 PSDSASGSSLFGVTNPSTGKSSTL-----GTCDYARWEDDPNYVVFLQGVSNHSDRIVLS 587

Query: 375 VMKKDGSQE----RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            M     +     ++  + +       SP GR L++    + + G  LY          L
Sbjct: 588 RMNLSSGEVDQVLQVAFKGNFESNALLSPDGRYLLY----NDEDGLHLYDAKFQESVWRL 643

Query: 431 INTPAYASDP-QW 442
              P     P  W
Sbjct: 644 DYPPKEVISPLVW 656


>gi|157374799|ref|YP_001473399.1| hypothetical protein Ssed_1660 [Shewanella sediminis HAW-EB3]
 gi|157317173|gb|ABV36271.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
          Length = 288

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 77/235 (32%), Gaps = 28/235 (11%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           S+D    E  F+P  ++  Y T   +    + +   + D   K+   F        FS +
Sbjct: 52  SKDGWEIEGVFAPGMKEFYYTTRAADGKKIIVIGFRQQDDVWKKYLQFPR-NGEVTFSPD 110

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESDREG 324
           G R  ++   D   D     L    +ER T     +         S  + +     D +G
Sbjct: 111 GTRMYMA---DGYKDR----LNDGWSERNTLGPMFDREDRGIMRLSASAKETYVHDDYKG 163

Query: 325 KEQLYVMQSNGS---DQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKF---AIGV- 375
            + L +         + + +S +     +   P  +P    + +     E F    + + 
Sbjct: 164 GDVLRISTLENGKRTEPQLMSDNFNTGEWTAHPFIAPDESYLIWDSERPEGFGGSDLYIS 223

Query: 376 --MKKDGSQERL-----LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                      +     +  D      + +P G+ ++F+R  D +    +Y +D 
Sbjct: 224 FRQDDATWGPAINMGESVNSDKWDAYASVTPDGKYILFNRGIDDNGNIDIYWVDA 278


>gi|195440620|ref|XP_002068138.1| GK10412 [Drosophila willistoni]
 gi|194164223|gb|EDW79124.1| GK10412 [Drosophila willistoni]
          Length = 414

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 80/204 (39%), Gaps = 20/204 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  + + RFSP+  ++A ++ D      V L + +      R G   S +    +S
Sbjct: 14  FTGHTSAITQLRFSPDGHQIASSSMDS----TVILWNLKQAARCIRFGAHCSPVYGVAWS 69

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
             G     S   D  + I+   ++  ++E L ++  +  S  +     Q++  SD +   
Sbjct: 70  PKGNLVA-SGSHDRTVKIWEPKVRGYSSEFLAHSKPV-RSVDFDNTGQQLLTASD-DKSV 126

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +L+ +    S ++ ++   + +++     ++P G L+A      +   I  +   G   R
Sbjct: 127 KLWRV----SRRQFVTSFSQQTHWVRAAKFNPNGKLVATVC-DDKSLRIYEV-GSGRCVR 180

Query: 385 LLVEDSNLQAP---TWSPSGRSLI 405
           L  E+    AP    W P G  + 
Sbjct: 181 LFTEE--HAAPRQLAWHPWGNMVA 202



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 9/130 (6%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-YFDP 352
               T          +SPD  QI   S  +    L+ ++      + I      S  +  
Sbjct: 11  ERHFTGHTSAITQLRFSPDGHQIA-SSSMDSTVILWNLKQA---ARCIRFGAHCSPVYGV 66

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            WSP+G+L+A +        I   K  G     L     +++  +  +G+ L+ +     
Sbjct: 67  AWSPKGNLVA-SGSHDRTVKIWEPKVRGYSSEFLAHSKPVRSVDFDNTGQQLLTASD--- 122

Query: 413 DTGSKLYSID 422
           D   KL+ + 
Sbjct: 123 DKSVKLWRVS 132


>gi|229485354|sp|B0XRV0|DPP5_ASPFC RecName: Full=Dipeptidyl-peptidase 5; AltName:
           Full=Dipeptidyl-peptidase V; Short=DPP V; Short=DppV;
           Flags: Precursor
 gi|159129322|gb|EDP54436.1| secreted dipeptidyl peptidase [Aspergillus fumigatus A1163]
          Length = 721

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/306 (17%), Positives = 101/306 (33%), Gaps = 54/306 (17%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD----GANIRYLTPSRDQILFEPRFS 220
           S++      +  IL+V+ +         L V        G     L  S   +      S
Sbjct: 78  SVSEIVWLSDDSILYVNSTNADIPGGVELWVTQASSFAKGYKAASLPASFSGLKAAKTKS 137

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----FRSMILAPRFSSNGKRALIS- 275
            + + VAY             + T    + +   +         L+  F      A+ S 
Sbjct: 138 GDIRFVAYGQSYPNGTAYNEELATAPLSSARIYDSIYVRHWDYWLSTTF-----NAVFSG 192

Query: 276 -VQKDEAMDIYSVDLQSNATERLTNTLFINISA----------SYSPDSSQIVFESDREG 324
            ++K    + YS+D      + L + +    S             SPD   + F+S    
Sbjct: 193 TLKKGHGKNGYSLD---GELKNLVSPVKNAESPYPPFGGASDYDLSPDGKWVAFKSKAPE 249

Query: 325 KEQ-------LYVMQSNGSDQKRISQDKE---------ASYFDPVWSPQGDLIAFTKFSG 368
             +       +Y++  + S+  R     +              PV+SP GD +A+ +   
Sbjct: 250 LPKANFTTSYIYLVPHDASETARPINGPDSPGTPKGIKGDSSSPVFSPNGDKLAYFQMRD 309

Query: 369 EKFA-----IGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYS 420
           E +      + V      +    V     ++P    W+P G++LI   +  G T  +L+S
Sbjct: 310 ETYESDRRVLYVYSLGSKKTIPSVAGDWDRSPDSVKWTPDGKTLIVGSEDLGRT--RLFS 367

Query: 421 IDLNGR 426
           +  N +
Sbjct: 368 LPANAK 373


>gi|118588443|ref|ZP_01545852.1| WD-repeat family protein [Stappia aggregata IAM 12614]
 gi|118439149|gb|EAV45781.1| WD-repeat family protein [Stappia aggregata IAM 12614]
          Length = 325

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/224 (18%), Positives = 79/224 (35%), Gaps = 21/224 (9%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +  V   DG   R    + D+ +    F+P   ++A   YD      V L     + AP
Sbjct: 107 RTAWVRFADG---REKEFAHDRAVGGLAFAPKGMRLAVGRYDG-----VTLWWAGTEGAP 158

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             + +++   L   FS +GK  ++S  ++ A+  +   L  +   R+T       S S+S
Sbjct: 159 VDL-SWKGAHLGVSFSPDGKY-VVSAMQENALHGWR--LSDSQDMRMTGYPAKVKSFSWS 214

Query: 311 PDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
                +   S                 G    ++    +         P+ D++A     
Sbjct: 215 VKGRYLA-TSGANAAILWPFFGKTGPMGQTPLQLGTRGDNLVSAVACHPKEDVVAVGYQD 273

Query: 368 GEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRK 409
           G    I + + + + E LL       + + TW   G  L+F  +
Sbjct: 274 G---MILMCRFEDNAEVLLRRPGLGPVSSMTWDADGVRLVFGTE 314



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 56/131 (42%), Gaps = 14/131 (10%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S  + F S R      +V  ++G +++      + +     ++P+G  +A  ++ G    
Sbjct: 98  SGALAFASGRT----AWVRFADGREKE---FAHDRAVGGLAFAPKGMRLAVGRYDG--VT 148

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +     +G+   L  + ++L   ++SP G+ ++ + +++   G +L     + ++  +  
Sbjct: 149 LWWAGTEGAPVDLSWKGAHLGV-SFSPDGKYVVSAMQENALHGWRL----SDSQDMRMTG 203

Query: 433 TPAYASDPQWV 443
            PA      W 
Sbjct: 204 YPAKVKSFSWS 214


>gi|170727282|ref|YP_001761308.1| peptidase S9 prolyl oligopeptidase [Shewanella woodyi ATCC 51908]
 gi|169812629|gb|ACA87213.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella woodyi ATCC 51908]
          Length = 689

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 93/273 (34%), Gaps = 54/273 (19%)

Query: 220 SPNQQKVAYATYDDEDILR---------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           SP+   VA+  Y   ++ +         +YL+D +    P   G      +  ++S++G 
Sbjct: 46  SPSGDNVAFTRYVPRELYKEENGLHWAELYLVDDKGVERPYITGQVTVNNI--QWSADGS 103

Query: 271 RALISVQ--KDEAMDIYSVDLQSNATERLTNTLFINISASY--SPDSSQIVFESDRE--- 323
                 +  +D+   +Y +       ++       ++ ASY  S D  QI   +      
Sbjct: 104 VIYFLAKMGEDKFTALYQIPFSGGQAQKTFELKGTDV-ASYALSHDGKQIAVIAKPAKDK 162

Query: 324 -------------------GKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLIA 362
                                +QL+V+    SD+    ++ + E    D  WS  G+ + 
Sbjct: 163 SVKELKKLGFMAEVYEEDLTNKQLFVVDLAVSDKPLTPVAWNIEDYVSDVQWSADGEQML 222

Query: 363 FTKFS---------GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF--SRKKD 411
                           ++ I V   D       + +  L    +S  G+ +    +  K 
Sbjct: 223 VKTQPTALIDDKYMKSQWHI-VNTADQKVVTSFITEGKLGDAEFSHDGQYVAILGAEDKH 281

Query: 412 GDTGSKLYSIDL-NGR-NETLINTPAYASDPQW 442
                +L+  +   G+ +E L N   + SD +W
Sbjct: 282 DPAAGRLFLAETKTGKVSEWLPNHLGHVSDFEW 314



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 57/173 (32%), Gaps = 40/173 (23%)

Query: 310 SPDSSQIVFES--------DREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           SP    + F          +  G    +LY++   G ++  I+   + +  +  WS  G 
Sbjct: 46  SPSGDNVAFTRYVPRELYKEENGLHWAELYLVDDKGVERPYIT--GQVTVNNIQWSADGS 103

Query: 360 LIAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTW--SPSGRSLIFSRKKDGD-- 413
           +I F    GE    A+  +   G Q +   E       ++  S  G+ +    K   D  
Sbjct: 104 VIYFLAKMGEDKFTALYQIPFSGGQAQKTFELKGTDVASYALSHDGKQIAVIAKPAKDKS 163

Query: 414 ------------------TGSKLYSIDLNGRNETLINTP----AYASDPQWVG 444
                             T  +L+ +DL   ++ L         Y SD QW  
Sbjct: 164 VKELKKLGFMAEVYEEDLTNKQLFVVDLAVSDKPLTPVAWNIEDYVSDVQWSA 216


>gi|113477375|ref|YP_723436.1| WD-40 repeat-containing protein [Trichodesmium erythraeum IMS101]
 gi|110168423|gb|ABG52963.1| WD-40 repeat [Trichodesmium erythraeum IMS101]
          Length = 914

 Score = 52.3 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/259 (13%), Positives = 82/259 (31%), Gaps = 56/259 (21%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            ++  +   +     S N + +A ++        + L +    +    + +  + + +  
Sbjct: 626 SISNKQPDSILSLTISFNGKILASSS-----GKNIQLWNLETAKLLDTLSSHTTNVRSVA 680

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDR 322
            S +GK    S  +D  + ++  D+ +     LT  +   +  +  ++ D   ++  S  
Sbjct: 681 ISPDGKTLA-SGSEDGTVKLW--DISTGKV--LTSFDHSGLITAVGFTADGRAVIGCSSD 735

Query: 323 EG--------KEQLYVMQ--------------SNGSDQKRI-----------------SQ 343
            G         E L+ M               +     + I                 S+
Sbjct: 736 SGMKLWDIETGELLHRMNGTQPIAFGVDGLQMAASGGPRYIRLWNVAEGQLLKNLPIPSR 795

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
           +         +S  G  +A       +  +  ++    +  L      +QA   SP G+ 
Sbjct: 796 NNNQGIQAIAFSQDGQTLAHAMRGESQVLVWNVETWEVRHTLKEHSQAIQAIAISPDGKI 855

Query: 404 LIFSRKKDGDTGSKLYSID 422
           L  S  +DG    K+Y  D
Sbjct: 856 LA-SSGEDG----KIYLWD 869



 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 45/276 (16%), Positives = 89/276 (32%), Gaps = 65/276 (23%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            ++ + + + A +     S    +     SP+ + +A  + D      V L D       
Sbjct: 653 KNIQLWNLETAKLLDTLSSHTTNVRSVAISPDGKTLASGSEDG----TVKLWDISTG--- 705

Query: 251 KRIGNFR--SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-------- 300
           K + +F    +I A  F+++G RA+I    D  M ++  D+++       N         
Sbjct: 706 KVLTSFDHSGLITAVGFTADG-RAVIGCSSDSGMKLW--DIETGELLHRMNGTQPIAFGV 762

Query: 301 ----LFINISAS-------------------------------YSPDSSQIVFESDREGK 325
               +  +                                   +S D   +   + R G+
Sbjct: 763 DGLQMAASGGPRYIRLWNVAEGQLLKNLPIPSRNNNQGIQAIAFSQDGQTLA-HAMR-GE 820

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            Q+ V      + +   ++   +      SP G ++A    SGE   I +        +L
Sbjct: 821 SQVLVWNVETWEVRHTLKEHSQAIQAIAISPDGKILA---SSGEDGKIYLWDMASG--KL 875

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           L       A  +SP  + L+       D   +L+ I
Sbjct: 876 LRSIKGYGAIVFSPDSQQLV---SVTEDNMIQLWQI 908



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 67/183 (36%), Gaps = 33/183 (18%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           + G   L   ++   G  R     RLW+V + + +      S   +    A   S D   
Sbjct: 759 AFGVDGL---QMAASGGPRY---IRLWNVAEGQLLKNLPIPSRNNNQGIQAIAFSQDGQT 812

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                +G                  ++ + V + +   +R+      Q +     SP+ +
Sbjct: 813 LAHAMRG------------------ESQVLVWNVETWEVRHTLKEHSQAIQAIAISPDGK 854

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +A +  D +    +YL D    +  + I  + +++    FS + ++ + SV +D  + +
Sbjct: 855 ILASSGEDGK----IYLWDMASGKLLRSIKGYGAIV----FSPDSQQLV-SVTEDNMIQL 905

Query: 285 YSV 287
           + +
Sbjct: 906 WQI 908


>gi|254881535|ref|ZP_05254245.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|319642921|ref|ZP_07997557.1| alanyl dipeptidyl peptidase [Bacteroides sp. 3_1_40A]
 gi|254834328|gb|EET14637.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|317385469|gb|EFV66412.1| alanyl dipeptidyl peptidase [Bacteroides sp. 3_1_40A]
          Length = 816

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 64/223 (28%), Gaps = 44/223 (19%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-----FSSNGKRALI 274
           SP+ + +           R   +  R   + +        +LA R     +     R   
Sbjct: 187 SPDGRYLI-------ANYRTTYVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYY 239

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---------- 324
           +    +   +  VD  +     L N    +    ++P    ++F   +EG          
Sbjct: 240 TRTGVDGRQLIVVDPLTGMETVLVN-KLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEV 298

Query: 325 ------------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-------TK 365
                       +  L          + ++     + +    S  G  +         TK
Sbjct: 299 LEPDDRQPGWRNRSYLAKYDLKTGLLQPLTF-GYHNVWAADISNDGRYLLMMTSQSRLTK 357

Query: 366 FSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFS 407
                F++  +     Q  LL++ D  +    +SP G  ++ S
Sbjct: 358 RPTTLFSLYRLDMQTLQAELLIDKDGFISGARFSPDGTQVLVS 400



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 75/199 (37%), Gaps = 28/199 (14%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFI 303
           + +      + A   S++G+  L+   +            +Y +D+Q+   E L +    
Sbjct: 325 QPLTFGYHNVWAADISNDGRYLLMMTSQSRLTKRPTTLFSLYRLDMQTLQAELLIDKDGF 384

Query: 304 NISASYSPDSSQIVFESDRE-----GKE------------QLYVMQSNGSDQKRISQDKE 346
              A +SPD +Q++     E     GK             Q Y++         +++D  
Sbjct: 385 ISGARFSPDGTQVLVSGSPESLGGIGKNVKEGQTPSMTDGQFYLLNIADKRVTPLTKDFN 444

Query: 347 ASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSL 404
            S    VW+   G  I FT  + + +++  M     + + L V +  + + + + +   +
Sbjct: 445 PSVQRAVWNKADGQ-IYFTAENRDCYSLYRMNPADGKIQQLEVSEDLVNSFSLAQNAPVM 503

Query: 405 IFSRKKDGDTGSKLYSIDL 423
            +   +      +LY+++ 
Sbjct: 504 AY-YGQSASNSDRLYTMNT 521



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 42/118 (35%), Gaps = 12/118 (10%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-----WSPQGDLIAFT 364
           SPD   ++         +   +    +   RI++               W P+ +   +T
Sbjct: 187 SPDGRYLI------ANYRTTYVGGRSAGSTRITELASGKVLAERTENMQWMPRSNRYYYT 240

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSI 421
           +   +   + V+      E +LV         ++P+   L+F+  ++G     ++Y +
Sbjct: 241 RTGVDGRQLIVVDPLTGMETVLVNKLPDGYFQFAPTEDYLLFTMTQEGPKERKEIYEV 298


>gi|38174120|gb|AAH61405.1| MGC75994 protein [Xenopus (Silurana) tropicalis]
          Length = 387

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 72/196 (36%), Gaps = 15/196 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +             +++V+ ++        +I    + +++  +S +G+  L + + 
Sbjct: 56  WSSD-SMFILCAMYKRGLVQVWSLEQPDWHC--KIDEGSAGLVSSCWSPDGRHILNTTEF 112

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++S+  +S     +          +++ D   +     R+ K+ + +   N    
Sbjct: 113 HLRITLWSLSAKS--VSYIKYPKACQQGIAFTHDGRHMALAERRDCKDYISIFVCNDWRL 170

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE------DSNL 392
            R  + +        W+P G ++A    +  ++ + +   DG   RLL           +
Sbjct: 171 LRHFETETQDLTGIAWAPNGCVLA-VWDTCLEYKVLLYSLDG---RLLSSYCAYEWSLGI 226

Query: 393 QAPTWSPSGRSLIFSR 408
           ++  WSP  + L    
Sbjct: 227 KSVAWSPMSQFLAIGS 242


>gi|45190361|ref|NP_984615.1| AEL246Cp [Ashbya gossypii ATCC 10895]
 gi|44983257|gb|AAS52439.1| AEL246Cp [Ashbya gossypii ATCC 10895]
          Length = 815

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 79/229 (34%), Gaps = 28/229 (12%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPS-------------RDQILFEPRFSPNQQKVAYAT 230
           V +G   + + +   DG  +    PS                 ++   FSP+ + +  A+
Sbjct: 502 VAAGFQDSYIKLWSLDGTPLESQLPSKAKDASNTVTLIGHSGPVYSVSFSPDNRYLVSAS 561

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D    +R++ +DT       +  N    +   +FS  G     +   D+   ++S D  
Sbjct: 562 ED--KTVRLWSLDTYTCLVSYKGHNHP--VWDVKFSPLGHYFA-TGSHDQTARLWSCDHI 616

Query: 291 SNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                R+      ++   ++ P+ + ++  S     +   +      D  R+     AS 
Sbjct: 617 Y--PLRIFAGHLNDVDCVTFHPNGTYVLTGSS---DKTCRMWDIQTGDSVRLFLGHTASV 671

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                SP G  +      G    I V    G+ +R+     + ++  +S
Sbjct: 672 VSVAVSPDGRWLTTGSEDG---VIIVWDI-GTGKRIKQMRGHGKSAVYS 716



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 82/270 (30%), Gaps = 44/270 (16%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVA---------YATYDDEDILRVYLMDTRIDRAPKRIGN 255
           Y   + ++ +   RFS + + VA           + D   +        +       +  
Sbjct: 481 YTFHNTNREMTCLRFSDDSRLVAAGFQDSYIKLWSLDGTPLESQLPSKAKDASNTVTLIG 540

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------NATERLTNTLFINISASY 309
               + +  FS + +  + S  +D+ + ++S+D  +             N    ++   +
Sbjct: 541 HSGPVYSVSFSPDNRYLV-SASEDKTVRLWSLDTYTCLVSYKGH-----NHPVWDV--KF 592

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SP        S     +   +   +     RI            + P G  +  T  S +
Sbjct: 593 SPLGHYFATGSH---DQTARLWSCDHIYPLRIFAGHLNDVDCVTFHPNGTYVL-TGSSDK 648

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-----------------G 412
              +  ++   S    L   +++ +   SP GR L    +                   G
Sbjct: 649 TCRMWDIQTGDSVRLFLGHTASVVSVAVSPDGRWLTTGSEDGVIIVWDIGTGKRIKQMRG 708

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
              S +YS+  N     L++  A  S   W
Sbjct: 709 HGKSAVYSLSFNKEGNILVSGGADQSVRVW 738


>gi|256006106|ref|ZP_05431035.1| hypothetical protein ClothDRAFT_2896 [Clostridium thermocellum DSM
           2360]
 gi|255989924|gb|EEU00077.1| hypothetical protein ClothDRAFT_2896 [Clostridium thermocellum DSM
           2360]
 gi|316939814|gb|ADU73848.1| hypothetical protein Clo1313_0772 [Clostridium thermocellum DSM
           1313]
          Length = 286

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 61/180 (33%), Gaps = 21/180 (11%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            N       +       ++  D  S    +L   +  +   S+     ++++    +  E
Sbjct: 123 PNSDSISFIL----GDALHIYDRSSGTLTKL-FKVAFDWY-SWDNTGKKLLYG---DYDE 173

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +Y+      ++K+I + +      PV+S   + IA+    G+   + V   +  +    
Sbjct: 174 NIYMYDMESKEEKKILEGR-----HPVYSNSNEYIAYM---GKDQKLTVYNVNTGENWKT 225

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKK---DGDTGSKLYSIDL-NGRNETLINTPAYASDPQW 442
           V   +     +SP  + ++   +           +Y++D   G+ + L           W
Sbjct: 226 VTIGSSTRYIFSPDDKYILLGTEYWDIVSIPHYIIYALDYKTGKKKRLFGGEGNVPSLDW 285


>gi|149175660|ref|ZP_01854279.1| internalin-related protein [Planctomyces maris DSM 8797]
 gi|148845379|gb|EDL59723.1| internalin-related protein [Planctomyces maris DSM 8797]
          Length = 429

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/223 (21%), Positives = 91/223 (40%), Gaps = 24/223 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISV 276
            +SP +   A  +  D  +       T + + +P++  N   MI+  R+S +GK   +  
Sbjct: 4   AWSPVENVFAVVSGTDGIVSLHKPDGTLVGKVSPEKPANPGIMII--RWSPDGKWIAVPQ 61

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIV-FESDREGKEQLYVM 331
           Q+ +++  YS DL      ++        S     ++S DS   +   S     ++  V+
Sbjct: 62  QQSDSVAFYSRDL--KQKLQIPKPESFEDSHASFWNWSSDSQYFMGLGSKAGKSDRALVI 119

Query: 332 QSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ----ERL 385
            S    Q RISQ +   Y       SP G+LI   +  G    + + K D  Q      +
Sbjct: 120 FSPDKQQARISQYQFPDYTTALLSASPAGNLILLVQKMGT---LCIHKLDNQQGPEIGPV 176

Query: 386 LVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           L +    ++  + +++PSG  L  S  ++G    +    + +G
Sbjct: 177 LWKGQMFADGSSASFTPSGELL--SESQEGSQNLRCLVREADG 217


>gi|145511998|ref|XP_001441921.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409182|emb|CAK74524.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1754

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 74/192 (38%), Gaps = 16/192 (8%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FS N + +A     +     V L D    +  +++   +  IL+  FS + K    S  K
Sbjct: 966  FSSNGKLIA----SNGKGNLVSLWDVESYKVIQQLDGHQDQILSIAFSPDSKTLA-SGSK 1020

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQIVFESDREGKEQLYVMQSN 334
            D+ + ++  D+Q+   + L +T+  +        ++ D  +IV   D  G   +  ++  
Sbjct: 1021 DKTIKLW--DIQNPQIKSLISTIDYHDHPVTGVKFTLDGKKIV-SVDSSGILIICNLEVI 1077

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQ 393
                K I    +        +    LIA          I + K     ER+LV     +Q
Sbjct: 1078 TEKPKDIIFQCQQEILVYTLTQDDQLIALGLADST---IKLAKLKAGVERILVGHTGKIQ 1134

Query: 394  APTWSPSGRSLI 405
            A  +S +G  L+
Sbjct: 1135 ALAFSKAGNRLV 1146


>gi|59802529|gb|AAX07508.1| putative serine/threonine protein kinase [Gemmata sp. Wa1-1]
          Length = 252

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 50/165 (30%), Gaps = 11/165 (6%)

Query: 218 RFSPNQQKVAYA---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            FSP+  K+  +      D +  ++ + D    +  +R+      +    FS +G+    
Sbjct: 89  AFSPDDTKIVASCGQGPSDGESHQIRIWDVATGQELQRLTGHTRDVRWVTFSPDGRTLA- 147

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI----VFESDREGKEQLYV 330
           S   D  + ++ +  +      +           + P   +I     F  +      L V
Sbjct: 148 SAGFDGTIRLWDL-ARGKEISSINAHNNYAERVFFLPGGKRIASCGAFPPNDPAYGGLRV 206

Query: 331 MQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                  Q R  +  +A        SP G   A      +   + 
Sbjct: 207 WDVTSGQQVRTWRGFDARGLIGLAVSPDGTY-ALASSREKTVRLW 250



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 62/195 (31%), Gaps = 19/195 (9%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           VY+ D    +  +              S +GK  L         ++   D  +    R  
Sbjct: 22  VYVYDWDTGQKVREFIGHSDTTWGAAVSRSGKLLLTCGSDG---EVLLRDFVTGDLVRKH 78

Query: 299 NTLFINI-SASYSPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDP 352
                 + S ++SPD ++IV  S  +G       Q+ +       + +            
Sbjct: 79  EFEAKQVWSVAFSPDDTKIV-ASCGQGPSDGESHQIRIWDVATGQELQRLTGHTRDVRWV 137

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSL----IF 406
            +SP G  +A   F G    I +      +E   +   ++  +   + P G+ +     F
Sbjct: 138 TFSPDGRTLASAGFDGT---IRLWDLARGKEISSINAHNNYAERVFFLPGGKRIASCGAF 194

Query: 407 SRKKDGDTGSKLYSI 421
                   G +++ +
Sbjct: 195 PPNDPAYGGLRVWDV 209



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 49/166 (29%), Gaps = 15/166 (9%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +++I+       S    + + + D              + +    FSP+ + +A A +D 
Sbjct: 94  DTKIVASCGQGPSDGESHQIRIWDVATGQELQRLTGHTRDVRWVTFSPDGRTLASAGFDG 153

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY----SVDL 289
                + L D    +    I    +      F   GKR             Y      D+
Sbjct: 154 ----TIRLWDLARGKEISSINAHNNYAERVFFLPGGKRIASCGAFPPNDPAYGGLRVWDV 209

Query: 290 QSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVM 331
            S    R       +       + SPD +     S RE   +L+  
Sbjct: 210 TSGQQVR--TWRGFDARGLIGLAVSPDGTY-ALASSREKTVRLWKF 252


>gi|115469284|ref|NP_001058241.1| Os06g0653800 [Oryza sativa Japonica Group]
 gi|51535047|dbj|BAD37418.1| putative U5 snRNP-specific 40 kDa protein [Oryza sativa Japonica
           Group]
 gi|51535597|dbj|BAD37540.1| putative U5 snRNP-specific 40 kDa protein [Oryza sativa Japonica
           Group]
 gi|113596281|dbj|BAF20155.1| Os06g0653800 [Oryza sativa Japonica Group]
 gi|215737249|dbj|BAG96178.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215767267|dbj|BAG99495.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 343

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 79/266 (29%), Gaps = 31/266 (11%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S      L  +  D  N   +       + + +++ +  ++  A+ D      V + D 
Sbjct: 71  GSHDKDIFLWYVHGDCKNY-MVLRGHKNAVLDLQWTTDGTQIISASPDK----TVRVWDV 125

Query: 245 RIDRAPKRIGNFRSMILA--PR--FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              +  K++    S + +  P   +       ++S   D    ++  DL+     +    
Sbjct: 126 ETGKQVKKMAEHSSFVNSCCPARKWPP----LVVSGSDDGTAKLW--DLRQRGAIQTLPD 179

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +   + S+S  + + VF    +    +       ++     +  +        SP G  
Sbjct: 180 KYQITAVSFSEAADK-VFTGGLD--NDVKWWDLRKNEVTEYLKGHQDMITGMQLSPDGSY 236

Query: 361 IAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDGD 413
           +       E   + +     +    + L    +         +WSP  R +       G 
Sbjct: 237 LLTNAMDNELKIWDLRPYAPENRNIKTLTGHQHNFEKNLLKCSWSPDNRKV-----TAGS 291

Query: 414 TGSKLYSIDLNGRNETLINTPAYASD 439
               +Y  D   R   L   P +   
Sbjct: 292 ADRMVYIWDTTSR-RILYKLPGHNGS 316


>gi|242399030|ref|YP_002994454.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidase [Thermococcus
           sibiricus MM 739]
 gi|242265423|gb|ACS90105.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidase [Thermococcus
           sibiricus MM 739]
          Length = 633

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 87/240 (36%), Gaps = 35/240 (14%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T S+   L +PR S + +KVAY           Y     ++        F      PRFS
Sbjct: 10  TFSKFAYLSDPRISRDGKKVAYVLTKANLKDNKYENTIVVEEVENGERKFIENASMPRFS 69

Query: 267 SNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDRE 323
            NGK+       +E    +++  DL S + +++     I ++S  ++ D  +I+    R 
Sbjct: 70  PNGKKITFVRSNEEKKTAEVWLYDLSSMSGKKVLEAKNILDVS--WNEDDRRILITGFR- 126

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                          +R  +D       PVW           F GEK    ++  +  + 
Sbjct: 127 ---------------RRDDEDFVFEDDVPVWFDAKGF-----FDGEKTTFWIVDTESEEI 166

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFS--RKKDGDTG----SKLYSIDLNGRNETLINTPAYA 437
               E     +  W   G  +I++   + DG+        +Y    +G++E +    +YA
Sbjct: 167 LEEFEAERFSSAIWH--GDKVIYNVPHRMDGNLQFFKFYDIYIYK-DGKSERIFEGVSYA 223


>gi|225874818|ref|YP_002756277.1| dipeptidyl peptidase, putative [Acidobacterium capsulatum ATCC
           51196]
 gi|225792690|gb|ACO32780.1| dipeptidyl peptidase, putative [Acidobacterium capsulatum ATCC
           51196]
          Length = 759

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 69/267 (25%), Gaps = 62/267 (23%)

Query: 199 DGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR---- 252
           D A       S+    + P  R+SP+ Q +            ++ +        +     
Sbjct: 191 DHAVALSTDGSQGNFYYLPTARWSPDSQNLVVYRIRPGFRREIHYVQAAPPDQLQPRYSS 250

Query: 253 -------------------IGNFRSMILAPRFSS------------NGKRALISVQKDEA 281
                              + + + + +A                 + +       +   
Sbjct: 251 MEYEKAGDVLDLQQPVLFHVASAQEVPIASELFPNPFDLSNTKWWKDSRGFTFEYNQRGH 310

Query: 282 --MDIYSVDLQSNATERLTNTLF-------------INISASY---SPDSSQIVFESDRE 323
               +  VD ++     L N                 +   +Y     D  +I++ S+R+
Sbjct: 311 QVYRVIEVDAKTGQPRVLINETSKTFIEYPRVTGSQYDTGWTYRHDWQDGKEIIWMSERD 370

Query: 324 GKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAF----TKFSGEKFAI--GVM 376
           G   LY+        + RI+                  I F         + + I    +
Sbjct: 371 GWPHLYLYNGTTGVVENRITHGSWVVRNVNYVDDAKRQIYFEASGMNRDEDPYFIHGYRI 430

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRS 403
             DGS    L  ++      +S  G+ 
Sbjct: 431 NFDGSGLTPLTPEAGNHTLVFSSDGKY 457


>gi|170743968|ref|YP_001772623.1| putative adenylate cyclase 3 [Methylobacterium sp. 4-46]
 gi|168198242|gb|ACA20189.1| putative adenylate cyclase 3 [Methylobacterium sp. 4-46]
          Length = 408

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 17/139 (12%)

Query: 48  VSIAFTKFVS------IDELGGKVSEVVSKDLQRS-DVFNLISQD---SFKQKITNPDSI 97
           +S+    F +       D L   ++  ++ DL R   +F ++S      ++ +  +P  I
Sbjct: 263 MSVVILPFKNPDGGSKEDSLAEAIAADITSDLTRIDGIF-IVSSSIALRYQNRPVDPQEI 321

Query: 98  PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHT 157
                   L  + + +G +      R R+  +L D     QI   +F S   SW  I   
Sbjct: 322 G-----RELDVRYVFSGTMH-HADGRFRINAQLVDASTGAQIWADRFKSREGSWADIEDE 375

Query: 158 ISDDIYQSITGEKGDFNSR 176
           I D + +++T    D  +R
Sbjct: 376 IVDRLVRTLTSGISDAETR 394


>gi|54303389|ref|YP_133382.1| putative oligogalacturonate lyase [Photobacterium profundum SS9]
 gi|46916819|emb|CAG23582.1| putative oligogalacturonate lyase [Photobacterium profundum SS9]
          Length = 388

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 65/183 (35%), Gaps = 24/183 (13%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR-DQILFEPRFSPNQQKVAYAT 230
            F+   +         ++   + +++ DG+N+R +      +      + P+   +AY +
Sbjct: 197 PFDDSTIGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHEVGESCTHEFWIPDGSAMAYVS 256

Query: 231 YDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDI 284
           Y      R +Y ++       + +       L   F       +G  A + V   ++ DI
Sbjct: 257 YFKGQTDRVIYKVNPETLENEEVMVMPPCSHLMSNFDGSLMVGDGSDAPVDVADSDSYDI 316

Query: 285 ------YSVDLQSNATERLTNTLF-----------INISASYSPDSSQIVFESDREGKEQ 327
                 Y ++ +     +L                 +   S++P+   ++F SD EG   
Sbjct: 317 ENDPFLYILNTKKKTFAKLAKHNSSWVVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPA 376

Query: 328 LYV 330
           +Y+
Sbjct: 377 IYI 379



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/227 (17%), Positives = 75/227 (33%), Gaps = 28/227 (12%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           T + E  L            PK I   R+      F+ +G++ L +   D   + Y +DL
Sbjct: 8   TLEFESFLDSDTQVKVTRLTPKNITCHRNYFYQKCFTKDGRKLLFAGDFDGNRNYYLLDL 67

Query: 290 QSNATERLTNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-----Q 343
           ++    +LT     N    + S D     +  +      L  +      +  I       
Sbjct: 68  ETQVAIQLTEGAGDNTFGGFISDDDKSFFYVKNEL---HLMKVDLETLQESIIYTVKDDW 124

Query: 344 DKEASYFDPV--------------WSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLL 386
               ++                  W P  D   F  F   +    ++K D   G  E + 
Sbjct: 125 KGYGTWVANSDCTKLVGIEILKSCWKPLTDWQKFHDFYHTEPTCRLIKVDIETGELEVVH 184

Query: 387 VEDSNLQAPTWSP-SGRSLIFSRKKDGDT-GSKLYSIDLNGRNETLI 431
            +D+ L  P + P    ++ F  +   D   ++++ ++ +G N   I
Sbjct: 185 QDDAWLGHPIYRPFDDSTIGFCHEGPHDLVDARMWLVNEDGSNVRKI 231



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/249 (15%), Positives = 84/249 (33%), Gaps = 35/249 (14%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + +T  R+   ++  F+ + +K+ +A  D +     YL+D     A +           
Sbjct: 28  PKNITCHRNYF-YQKCFTKDGRKLLFAG-DFDGNRNYYLLDLETQVAIQLTEGAGDNTFG 85

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASY--SPDSSQIV-- 317
              S + K           + +  VDL++     + T         ++  + D +++V  
Sbjct: 86  GFISDDDKSFFYVKN---ELHLMKVDLETLQESIIYTVKDDWKGYGTWVANSDCTKLVGI 142

Query: 318 ---------------FESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGD 359
                          F      +   +L  +     + + + QD +A    P++ P    
Sbjct: 143 EILKSCWKPLTDWQKFHDFYHTEPTCRLIKVDIETGELEVVHQD-DAWLGHPIYRPFDDS 201

Query: 360 LIAFTKFSGEKF---AIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGD 413
            I F            + ++ +DGS  R + E     +     W P G ++ +     G 
Sbjct: 202 TIGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHEVGESCTHEFWIPDGSAMAYVSYFKGQ 261

Query: 414 TGSKLYSID 422
           T   +Y ++
Sbjct: 262 TDRVIYKVN 270


>gi|306841096|ref|ZP_07473816.1| WD repeat-containing protein [Brucella sp. BO2]
 gi|306288871|gb|EFM60180.1| WD repeat-containing protein [Brucella sp. BO2]
          Length = 324

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 102/312 (32%), Gaps = 32/312 (10%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWD--VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
            +  G V +           + D  +     + GK   +     R +    +  +   + 
Sbjct: 26  AMADGAVHRLDDGHQTAT--VHDGLLSAAMAVDGKSLVTGGEDGR-VCRIDAKGVVTELA 82

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                + + +       V      +      DG    +    +++ +    F+P  Q++A
Sbjct: 83  NIPRKWITAVATGPNGTVGFASGKTAWSRAADGKVQEFT---QERSVEGIAFAPKGQRLA 139

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            A Y+        L+ T     P  +  ++   +   FS +G+  + S+Q++ A+  +  
Sbjct: 140 IARYNG-----ATLIWTGTAAKPVEL-EWKGAHIGITFSPDGRFLITSMQEN-ALHGWR- 191

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD------QKRI 341
            L+ N   R+T         S+S  +  +       G     V    G D         +
Sbjct: 192 -LEDNKHMRMTGYPAKVKDWSWSAKAKWLA----TSGAPAAIVWPFAGKDGPMGKAPLEL 246

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSP 399
               ++        P G+ IA   ++     I +++    +E LL       + + +W  
Sbjct: 247 GLRGDSMVTSVACHP-GEDIAAIGYNDG--MILIVRFADQKEVLLRRPGKGAITSMSWDE 303

Query: 400 SGRSLIFSRKKD 411
            G  L+F  +  
Sbjct: 304 DGYRLVFGSQAG 315



 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 28/202 (13%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----F 302
               +       +L+   + +GK  +      E   +  +D +      L N        
Sbjct: 36  DDGHQTATVHDGLLSAAMAVDGKSLV---TGGEDGRVCRIDAK-GVVTELANIPRKWITA 91

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +    +       + F S     +  +   ++G  Q+     +E S     ++P+G  +A
Sbjct: 92  VATGPN-----GTVGFAS----GKTAWSRAADGKVQE---FTQERSVEGIAFAPKGQRLA 139

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +++G      +     ++   L         T+SP GR LI S +++   G +L    
Sbjct: 140 IARYNGATL---IWTGTAAKPVELEWKGAHIGITFSPDGRFLITSMQENALHGWRL---- 192

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            + ++  +   PA   D  W  
Sbjct: 193 EDNKHMRMTGYPAKVKDWSWSA 214


>gi|257057577|ref|YP_003135409.1| prolyl oligopeptidase family protein [Saccharomonospora viridis DSM
           43017]
 gi|256587449|gb|ACU98582.1| prolyl oligopeptidase family protein [Saccharomonospora viridis DSM
           43017]
          Length = 609

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 63/201 (31%), Gaps = 8/201 (3%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSP-NQQKVAYATY 231
           + R+L +  S        +L V+  DG ++       +        FSP          +
Sbjct: 175 DERLLAIGHSEHGDSRHPALRVLSSDGFDVVAEKWDGEGKGLTALAFSPRKGDPRLLVQH 234

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           +  D   + + D   D   +   +    ++   +  +G+  LI+        +Y  +L +
Sbjct: 235 ERRDREELLVWDVEADTETELDIDLPGELVG-DWYPDGEALLIAQFDKGRSKLYRYELAT 293

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                L         A   PD +     S+      + V +  G D+  I+   E +   
Sbjct: 294 ATLTPLDTPPGWIGGAGARPDGAVEYTWSNAAEPPLVRVREPGGEDRVLITPPGERAPGS 353

Query: 352 PVWSPQGDLIAFTKFSGEKFA 372
              +      AF    G +  
Sbjct: 354 RPLTD-----AFVDGPGGQVH 369



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 64/169 (37%), Gaps = 3/169 (1%)

Query: 260 ILAPRFSSNGKRA-LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +  P ++ +   A L         ++Y+ D  ++   ++T+     +  + SPD + I +
Sbjct: 33  VSLPEWALDAPHARLYVSNASGVWELYAWDQATDTHRQVTDRPNGTLHGTLSPDGAWIWW 92

Query: 319 ESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            +D +G E   +V +  G   K +    +     P     G  +     S +  +     
Sbjct: 93  FNDTDGDEFGTWVREPFGGGAKPVPALPDVPAGYPAGLEIGHRLVAVGVSTDDGSALYAH 152

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNG 425
           +DG  ER    +++ +    S   R L     + GD+    L  +  +G
Sbjct: 153 RDGRTERFYANENDAEVAALSRDERLLAIGHSEHGDSRHPALRVLSSDG 201



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 45/299 (15%), Positives = 90/299 (30%), Gaps = 70/299 (23%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R+        +  P ++ +         +   +  +Y  D   D   +++ +  +  L 
Sbjct: 22  ARWRARFSAARVSLPEWALDAPHARLYVSNASGVWELYAWDQATDTH-RQVTDRPNGTLH 80

Query: 263 PRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSP---------- 311
              S +G         D      +  +      + +     +    +  P          
Sbjct: 81  GTLSPDGAWIWWFNDTDGDEFGTWVREPFGGGAKPV---PALPDVPAGYPAGLEIGHRLV 137

Query: 312 -------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
                  D S +   + R+G+ + +    N ++   +S+D+                A  
Sbjct: 138 AVGVSTDDGSALY--AHRDGRTERFYANENDAEVAALSRDERLLAIGHSEHGDSRHPALR 195

Query: 365 KFSGEKFAIGVMKKDG--------------SQERLLVED----------SNLQAPT---- 396
             S + F +   K DG                 RLLV+            +++A T    
Sbjct: 196 VLSSDGFDVVAEKWDGEGKGLTALAFSPRKGDPRLLVQHERRDREELLVWDVEADTETEL 255

Query: 397 -----------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                      W P G +L+ ++   G   SKLY  +L     T ++TP     P W+G
Sbjct: 256 DIDLPGELVGDWYPDGEALLIAQFDKGR--SKLYRYELATATLTPLDTP-----PGWIG 307



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 74/262 (28%), Gaps = 29/262 (11%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V +  G   + +    D     P       ++       +D   +Y    R  R  +  
Sbjct: 104 WVREPFGGGAKPVPALPDVPAGYPAGLEIGHRLVAVGVSTDDGSALYAH--RDGRTERFY 161

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            N     +A   S + +   I   +         D +  A   L++  F  ++  +  + 
Sbjct: 162 ANENDAEVA-ALSRDERLLAIGHSEHG-------DSRHPALRVLSSDGFDVVAEKWDGEG 213

Query: 314 S---QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-----------FDPVWSPQGD 359
                + F S R+G  +L V       ++ +  D EA                 W P G+
Sbjct: 214 KGLTALAF-SPRKGDPRLLVQHERRDREELLVWDVEADTETELDIDLPGELVGDWYPDGE 272

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +   +F   +  +   +   +    L      +      P G                L
Sbjct: 273 ALLIAQFDKGRSKLYRYELATATLTPLDTPPGWIGGAGARPDG---AVEYTWSNAAEPPL 329

Query: 419 YSIDLNGRNETLINTPAYASDP 440
             +   G  + ++ TP     P
Sbjct: 330 VRVREPGGEDRVLITPPGERAP 351


>gi|149201710|ref|ZP_01878684.1| Prolyl oligopeptidase [Roseovarius sp. TM1035]
 gi|149144758|gb|EDM32787.1| Prolyl oligopeptidase [Roseovarius sp. TM1035]
          Length = 734

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 57/326 (17%), Positives = 99/326 (30%), Gaps = 52/326 (15%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL---TP 208
           R + H     ++   T         + F + +         L     DGAN   +   T 
Sbjct: 94  RDVFHRRLTAMFDHETLTPPVERGGLYFFTRNGGLDNQAQLLVREGADGANRILIDPNTW 153

Query: 209 SRDQILFEPRF--SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           S D  +    +  SP+   VA+A  D     R   +               +      + 
Sbjct: 154 SEDGTVALAEWAASPDGTFVAFAMQDSGSDWRTIRVINTSTGEILDDTVEWARFTTIAWH 213

Query: 267 SNGKRALISVQKD-EAMDIYSVDLQSNAT--ERLTNTLFIN-------------ISASYS 310
            NG     S   + EA   +S  ++ +A    RL +    +              S   +
Sbjct: 214 PNGSGFYYSRFPEPEAGAAFSAGVEGHAVYFHRLGSHQSEDQLIHAATAGQALLHSVDVT 273

Query: 311 PDSSQ-IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           PD    IV+ S   G   + V   + +D    +  +       +    G  + F      
Sbjct: 274 PDGRYLIVYTSALTGGVAVTVTDLSSADPAPDTIIESYDDRWLLLGNVGTKLFFATQ--- 330

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWS------PS-----------GRSLIFSRKKDG 412
                   KD  + R++  D +   P +S      P            G  L+ S   D 
Sbjct: 331 --------KDAPRGRIVTMDLSEAQPGFSEMIPERPDAVLREGGSAMLGDRLLLSYTIDV 382

Query: 413 DTGSKLYSIDLNGRNETLINTPAYAS 438
            + ++LY  +L+G  E  +  P   S
Sbjct: 383 QSQAELY--NLDGTFEGTVPLPGPGS 406


>gi|268534136|ref|XP_002632198.1| Hypothetical protein CBG07064 [Caenorhabditis briggsae]
 gi|187033652|emb|CAP27287.1| hypothetical protein CBG_07064 [Caenorhabditis briggsae AF16]
          Length = 477

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 75/191 (39%), Gaps = 18/191 (9%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P   + +   +FSP+ + +A  + D    +R++ ++  +     +    ++ +L+  +S 
Sbjct: 106 PGHGEPVISAQFSPDGRGLASGSGD--QTMRIWDIELELPLHTCK--AHKNWVLSIAWSP 161

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP---DSS-QIVFESD 321
           +  +   S  K+  + I+  D ++     + L        S ++ P   D++ +++  S 
Sbjct: 162 DATKIA-SACKNGEICIW--DAKTGQQVGKTLKRHKQWITSLAWQPMHRDATCRLLASSG 218

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           ++G   +++  +      R      AS     W   G+ + ++        +     DG 
Sbjct: 219 KDGN--IFIWDTVKGTVVRCLSGHTASVTCLRW--GGEGLIYSGSQDRTVKMWRAD-DGV 273

Query: 382 QERLLVEDSNL 392
             R +   ++ 
Sbjct: 274 MCRNMTGHAHW 284



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 74/186 (39%), Gaps = 22/186 (11%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFI 303
           + R    I      +++ +FS +G+    S   D+ M I+ ++L+       T       
Sbjct: 98  VTRCSASIPGHGEPVISAQFSPDGRGLA-SGSGDQTMRIWDIELE---LPLHTCKAHKNW 153

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSP---QG- 358
            +S ++SPD+++I   + + G  ++ +  +    Q   +  +   +     W P      
Sbjct: 154 VLSIAWSPDATKIA-SACKNG--EICIWDAKTGQQVGKTLKRHKQWITSLAWQPMHRDAT 210

Query: 359 -DLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             L+A +   G  F    +K  G+  R L    +++    W   G  LI+S  +  D   
Sbjct: 211 CRLLASSGKDGNIFIWDTVK--GTVVRCLSGHTASVTCLRWG--GEGLIYSGSQ--DRTV 264

Query: 417 KLYSID 422
           K++  D
Sbjct: 265 KMWRAD 270


>gi|17233145|ref|NP_490235.1| WD repeat-containing protein [Nostoc sp. PCC 7120]
 gi|17135667|dbj|BAB78213.1| WD-repeat protein [Nostoc sp. PCC 7120]
          Length = 1189

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 74/232 (31%), Gaps = 28/232 (12%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG    ++ +         +        ++   FS + + +A  +YD      V + D  
Sbjct: 924  SGSADRTIKLWSPHTGQCLHTLHGHGSWVWAIAFSLDDKLLASGSYDH----TVKIWDVS 979

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              +  + +      +LA  FS +GK    S   ++ +  +  D+++    +   T   + 
Sbjct: 980  SGQCLQTLQGHPGSVLAVAFSCDGKTL-FSSGYEKLVKQW--DVETGYCLQ---TWEADS 1033

Query: 306  SASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDL 360
            +  +    S D+  +       G + +  +   G      +     S    + ++  G  
Sbjct: 1034 NRVWAVAVSRDNQYLA----TGGDDSVVRLWDIGKGVCVRTFSGHTSQVICILFTKDGRR 1089

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS----PSGRSLIFSR 408
            +  +  S     I        +   L          WS    P  ++L+ S 
Sbjct: 1090 MI-SSSSDRTIKIW--NVSTGEC--LATLQAHDHWVWSLYLTPDEKTLLSSS 1136



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 55/164 (33%), Gaps = 13/164 (7%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             I +  FS +G +   +      ++I+ V+                   ++S  S   V
Sbjct: 563 GGITSVAFSRDGCQLA-TSDTSGVINIWDVN-NGKQLFNCQEHNSWIWDVAFS--SVAPV 618

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S       + +  +   +         +      +SP+G L+A + +     ++ V  
Sbjct: 619 LASC-GQDHTIKLWNTTTGECFNTLHGHTSIVTSVAFSPEGKLLASSSYD---HSVKVWD 674

Query: 378 KDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            D  +  +  L  D+ + +  + P G+ L        D   KL+
Sbjct: 675 LDTGECLQTFLGHDACVWSVVFHPVGQILA---TAGEDNTIKLW 715



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 35/293 (11%), Positives = 92/293 (31%), Gaps = 42/293 (14%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           +WDV + KQ+   +                             ++     V+  + S   
Sbjct: 588 IWDVNNGKQLFNCQ-----------------------EHNSWIWDVAFSSVAPVLASCGQ 624

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            +++ + +               I+    FSP  + +A ++YD      V + D      
Sbjct: 625 DHTIKLWNTTTGECFNTLHGHTSIVTSVAFSPEGKLLASSSYDH----SVKVWDLDTGEC 680

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISAS 308
            +      + + +  F   G + L +  +D  + ++   LQS    + L        + +
Sbjct: 681 LQTFLGHDACVWSVVFHPVG-QILATAGEDNTIKLWE--LQSGCCLKTLQGHQHWVKTIA 737

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++     +   S     + + +   +        Q          ++P+ +L+    +  
Sbjct: 738 FNSGGRILASGSF---DQNVKLWDIHTGKCVMTLQGHTGVVTSVAFNPKDNLLLSGSYDQ 794

Query: 369 EKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
               + V  +   +  + L    + + +  + P G   +F      D  +K++
Sbjct: 795 S---VKVWDRKTGRCLDTLKKHTNRIWSVAFHPQGH--LFVSG-GDDHAAKIW 841



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 60/202 (29%), Gaps = 17/202 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D +     +     +  +++  FS     +A    D      + L +T        
Sbjct: 586 INIWDVNNGKQLFNCQEHNSWIWDVAFSSVAPVLASCGQDH----TIKLWNTTTGECFNT 641

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSP 311
           +    S++ +  FS  GK    S   D ++ ++  DL +    +          S  + P
Sbjct: 642 LHGHTSIVTSVAFSPEGKLLA-SSSYDHSVKVW--DLDTGECLQTFLGHDACVWSVVFHP 698

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
               +           + + +       +  Q  +       ++  G ++A   F     
Sbjct: 699 VGQILA---TAGEDNTIKLWELQSGCCLKTLQGHQHWVKTIAFNSGGRILASGSFDQNVK 755

Query: 371 -FAIG----VMKKDGSQERLLV 387
            + I     VM   G    +  
Sbjct: 756 LWDIHTGKCVMTLQGHTGVVTS 777


>gi|320161054|ref|YP_004174278.1| hypothetical protein ANT_16520 [Anaerolinea thermophila UNI-1]
 gi|319994907|dbj|BAJ63678.1| hypothetical protein ANT_16520 [Anaerolinea thermophila UNI-1]
          Length = 746

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 70/227 (30%), Gaps = 48/227 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +           R+ +         K     R  I +  FS +GK  L S   
Sbjct: 445 FSPDGEFLV----SAGGDHRLRVFRMTTQSVVKTFEGHRGQIRSIHFSPDGK-ILYSAGF 499

Query: 279 DEAMDIYSVDLQSN-----------------ATERLTNTLFINISASYS----PDSSQI- 316
           D ++  +   + +                  A  RL        S +      PD  Q+ 
Sbjct: 500 DGSVRAWRFPMGTELYQSSFPEKEIFAILPFAEGRLLAVAGY--SPNIRILSLPDLKQVH 557

Query: 317 ------------V--FESD---REGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQG 358
                          F SD     GK+++    +  +          AS    ++  P G
Sbjct: 558 SIPGCAEGNFFLAGHFSSDFVIAGGKDRILRTWNGKTGSFLWQFGPLASPPVGMFLHPDG 617

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           + + +   SG    I V     +  ++L+++    +   SP G  + 
Sbjct: 618 EHLLYGTRSGTLGFIRVSNP-TAATQVLIQEDTFSSLALSPDGAWIA 663


>gi|290980540|ref|XP_002672990.1| eukaryotic translation initiation factor 3 subunit 9-like protein
           [Naegleria gruberi]
 gi|284086570|gb|EFC40246.1| eukaryotic translation initiation factor 3 subunit 9-like protein
           [Naegleria gruberi]
          Length = 752

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/264 (17%), Positives = 100/264 (37%), Gaps = 37/264 (14%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    +       F P+++ V +   ++    ++           +++  F         
Sbjct: 304 VIQWNEDETLMAYFDPSEESVIFYNVEETPEKKISFQPRSDIVIQRKVHAF-------AL 356

Query: 266 SSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTLF-----INISASYSPDSSQI-VF 318
           S     A+ +   +++ +  SV L +    +R T T        ++   ++   + + V+
Sbjct: 357 SPKSTFAIYTYNTNKSTEQNSVRLYKLPNVKRPTATKHFSHDVDSVEMRWNKVGTALLVY 416

Query: 319 E------SDRE--GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGE 369
                  SD+   G+ +LY ++SNG+  K I   +E    D  WSP+G+  +A   +SG 
Sbjct: 417 TTTNTDQSDKSYYGENKLYYVRSNGNLSKDIQLTEEGPVHDLQWSPRGNEFVAIYGYSGP 476

Query: 370 KFAIGVMKKDGS------QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                +            Q++    +  +    +SP GR L+ +    G TG+ L+    
Sbjct: 477 NMRATLFDAQSQPIFEFLQQQENTSNWKVNKIFYSPHGRFLVLAGF-GGFTGTLLF---F 532

Query: 424 NGRNETLINTPAYASDPQ---WVG 444
           +   + L+     AS+P    W  
Sbjct: 533 DRERKRLMGIN-QASEPTFAHWSP 555


>gi|282163432|ref|YP_003355817.1| hypothetical protein MCP_0762 [Methanocella paludicola SANAE]
 gi|282155746|dbj|BAI60834.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 71

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 20/56 (35%), Gaps = 4/56 (7%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
           I N       P +S +G +   +       DIY+ +   +    LTN    +   +
Sbjct: 12  ISNNHGQNWEPSWSPDGTKIAFTC----NWDIYAKNADGSEQTDLTNNQKWDYEPA 63



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 31/63 (49%), Gaps = 4/63 (6%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           ++        ++N    N   S+SPD ++I F  + +    +Y   ++GS+Q  ++ +++
Sbjct: 2   MNADGLEQTCISNNHGQNWEPSWSPDGTKIAFTCNWD----IYAKNADGSEQTDLTNNQK 57

Query: 347 ASY 349
             Y
Sbjct: 58  WDY 60



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 5/63 (7%)

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M ++G +Q  IS +   ++ +P WSP G  IAFT      + I     DGS++  L  + 
Sbjct: 2   MNADGLEQTCISNNHGQNW-EPSWSPDGTKIAFTC----NWDIYAKNADGSEQTDLTNNQ 56

Query: 391 NLQ 393
              
Sbjct: 57  KWD 59



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 30/69 (43%), Gaps = 8/69 (11%)

Query: 375 VMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LIN 432
           +M  DG ++  +  +      P+WSP G  + F+          +Y+ + +G  +T L N
Sbjct: 1   MMNADGLEQTCISNNHGQNWEPSWSPDGTKIAFT------CNWDIYAKNADGSEQTDLTN 54

Query: 433 TPAYASDPQ 441
              +  +P 
Sbjct: 55  NQKWDYEPA 63


>gi|282163431|ref|YP_003355816.1| hypothetical protein MCP_0761 [Methanocella paludicola SANAE]
 gi|282155745|dbj|BAI60833.1| hypothetical protein [Methanocella paludicola SANAE]
          Length = 178

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           D   DI  ++   +    ++N    +I  ++SPD S+I F S R G  
Sbjct: 129 DNGFDISVMNADGSGLIDVSNNPASDIMPAWSPDGSKIAFVSYRTGLP 176



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 2/59 (3%)

Query: 359 DLIAF-TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           + I F        F I VM  DGS    +    ++   P WSP G  + F   + G  G
Sbjct: 119 EKIVFQRHMHDNGFDISVMNADGSGLIDVSNNPASDIMPAWSPDGSKIAFVSYRTGLPG 177



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 8/79 (10%)

Query: 297 LTNTLFINISASYSP-----DSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +T+   I+   S+ P      + +IVF+    +    + VM ++GS    +S +  AS  
Sbjct: 98  VTSLDAIDDG-SFPPGPNLTQNEKIVFQRHMHDNGFDISVMNADGSGLIDVS-NNPASDI 155

Query: 351 DPVWSPQGDLIAFTKFSGE 369
            P WSP G  IAF  +   
Sbjct: 156 MPAWSPDGSKIAFVSYRTG 174



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 6/59 (10%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           +K+ +  +  ++   + +M+         + N  +  + P +S +G +      +    
Sbjct: 119 EKIVFQRHMHDNGFDISVMNADGSGLI-DVSNNPASDIMPAWSPDGSKIAFVSYRTGLP 176



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           N +I+F      +G     + VM+ DG+ +  ++ +       P +SP+  K+A+ +Y  
Sbjct: 118 NEKIVFQRHMHDNGF---DISVMNADGSGLIDVSNNPAS-DIMPAWSPDGSKIAFVSYRT 173

Query: 234 E 234
            
Sbjct: 174 G 174


>gi|154335098|ref|XP_001563789.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134060818|emb|CAM37834.1| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 702

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 73/192 (38%), Gaps = 18/192 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP +   A  + +D     + L +  +          +  I+   FS +GK    +  
Sbjct: 415 ALSPTEMDFASCSNED---ASITLNNFGLGSEVGIFTGHQDTIINATFSPDGKYLA-TAS 470

Query: 278 KDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           KD+AM ++  D+ +     LT     + I   +SPDS  +V       ++++  +     
Sbjct: 471 KDKAMILW--DVMTTK-RLLTFAHPKVVICCCFSPDSKYLV----SGCQDRVCRLWDTKR 523

Query: 337 DQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQ 393
            ++ +   + +       +SP G  I           + V     ++ R  LL     + 
Sbjct: 524 GREWLRYAEHKGIIIAIAFSPDGHYICSASADKS---LRVWSATTAKTRFHLLGHGGMIL 580

Query: 394 APTWSPSGRSLI 405
           + +++  GRS+I
Sbjct: 581 SCSYTSDGRSII 592



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 63/189 (33%), Gaps = 18/189 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--RSMILAP 263
           +       +    FSP+ + +A A+ D         M        KR+  F    +++  
Sbjct: 446 IFTGHQDTIINATFSPDGKYLATASKDK-------AMILWDVMTTKRLLTFAHPKVVICC 498

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS + K  + S  +D    ++    +     R      I I+ ++SPD   I   S   
Sbjct: 499 CFSPDSKYLV-SGCQDRVCRLWDT-KRGREWLRYAEHKGIIIAIAFSPDGHYICSAS--- 553

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + L V  +  +  +              ++  G  I     S ++  + V   +    
Sbjct: 554 ADKSLRVWSATTAKTRFHLLGHGGMILSCSYTSDGRSII----SNDELLLRVWSAEDGSC 609

Query: 384 RLLVEDSNL 392
           +L V   ++
Sbjct: 610 KLSVSPGDI 618


>gi|124008054|ref|ZP_01692753.1| peptidoglycan-associated cytoplasmic membrane protein, putative
           [Microscilla marina ATCC 23134]
 gi|123986468|gb|EAY26274.1| peptidoglycan-associated cytoplasmic membrane protein, putative
           [Microscilla marina ATCC 23134]
          Length = 563

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 73/220 (33%), Gaps = 44/220 (20%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD---LQSNAT------------- 294
           + +     +  AP  S++GK  +     +     +  +   L+S                
Sbjct: 25  RAVSTHTFVEYAPTVSADGKTMVFQSNNNPYKAWFLYESTRLKSGRWSAPEPIESINTFG 84

Query: 295 ERLTNTLFINIS----ASYSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDK- 345
           +R T               S +   ++F +     + G++  Y  + NG+  + ++  K 
Sbjct: 85  QRPTEVNGFQTDFIATPCLSANGKTLLFSATFRGGKGGRDIYYARKINGNWTRPVNMGKV 144

Query: 346 ---EASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERL-------LVED 389
              +     P  S  G  + F +   +K      + + V +K+              +  
Sbjct: 145 INSKGHDDCPAISADGQRLYFARPLKDKKEGQRCYKLFVARKNKRGYWQAPHPLPYPINT 204

Query: 390 SNLQAPTWSPSGRSLIFSR-KKDGDTGSKLY--SIDLNGR 426
              + P       +L+F+  +K G  G  LY   +D+ G+
Sbjct: 205 GCEKCPRIMSDNATLLFASIRKGGKGGFDLYKAVLDIEGK 244



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 57/166 (34%), Gaps = 33/166 (19%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESD---------------REGKEQ----LYVMQSN 334
              ++   F+  + + S D   +VF+S+               + G+      +  + + 
Sbjct: 24  IRAVSTHTFVEYAPTVSADGKTMVFQSNNNPYKAWFLYESTRLKSGRWSAPEPIESINTF 83

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKKDGSQER------ 384
           G     ++  +      P  S  G  + F+       G +      K +G+  R      
Sbjct: 84  GQRPTEVNGFQTDFIATPCLSANGKTLLFSATFRGGKGGRDIYYARKINGNWTRPVNMGK 143

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGR 426
           ++    +   P  S  G+ L F+R    KK+G    KL+    N R
Sbjct: 144 VINSKGHDDCPAISADGQRLYFARPLKDKKEGQRCYKLFVARKNKR 189



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 24/166 (14%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKR------ 252
           G     +   +   +  P  S N + + + AT+      R      +I+    R      
Sbjct: 84  GQRPTEVNGFQTDFIATPCLSANGKTLLFSATFRGGKGGRDIYYARKINGNWTRPVNMGK 143

Query: 253 IGNFRSMILAPRFSSNGKRALISV---QKDEAMDIYSVDLQSNATERLTNTLF-----IN 304
           + N +     P  S++G+R   +     K E    Y + +                  IN
Sbjct: 144 VINSKGHDDCPAISADGQRLYFARPLKDKKEGQRCYKLFVARKNKRGYWQAPHPLPYPIN 203

Query: 305 IS----ASYSPDSSQIVFESDREGKEQLY-----VMQSNGSDQKRI 341
                      D++ ++F S R+G +  +     V+   G +   +
Sbjct: 204 TGCEKCPRIMSDNATLLFASIRKGGKGGFDLYKAVLDIEGKEWVEL 249


>gi|59802600|gb|AAX07535.1| WD-repeat protein [Gemmata sp. Wa1-1]
          Length = 254

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 50/165 (30%), Gaps = 11/165 (6%)

Query: 218 RFSPNQQKVAYA---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            FSP+  K+  +      D +  ++ + D    +  +R+      +    FS +G+    
Sbjct: 89  AFSPDDTKIVASCGQGPSDGESHQIRIWDVATGQELQRLTGHTRDVRWVTFSPDGRTLA- 147

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI----VFESDREGKEQLYV 330
           S   D  + ++ +  +      +           + P   +I     F  +      L V
Sbjct: 148 SAGFDGTIRLWDL-ARGKEISSINAHNNYAERVFFLPGGKRIASCGAFPPNDPAYGGLRV 206

Query: 331 MQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                  Q R  +  +A        SP G   A      +   + 
Sbjct: 207 WDVTSGQQVRTWRGFDARGLIGLAVSPDGTY-ALASSREKTVRLW 250



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 62/195 (31%), Gaps = 19/195 (9%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           VY+ D    +  +              S +GK  L         ++   D  +    R  
Sbjct: 22  VYVYDWDTGQKVREFIGHSDTTWGAAVSRSGKLLLTCGSDG---EVLLRDFVTGDLVRKH 78

Query: 299 NTLFINI-SASYSPDSSQIVFESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDP 352
                 + S ++SPD ++IV  S  +G       Q+ +       + +            
Sbjct: 79  EFEAKQVWSVAFSPDDTKIV-ASCGQGPSDGESHQIRIWDVATGQELQRLTGHTRDVRWV 137

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSL----IF 406
            +SP G  +A   F G    I +      +E   +   ++  +   + P G+ +     F
Sbjct: 138 TFSPDGRTLASAGFDGT---IRLWDLARGKEISSINAHNNYAERVFFLPGGKRIASCGAF 194

Query: 407 SRKKDGDTGSKLYSI 421
                   G +++ +
Sbjct: 195 PPNDPAYGGLRVWDV 209



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 49/166 (29%), Gaps = 15/166 (9%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +++I+       S    + + + D              + +    FSP+ + +A A +D 
Sbjct: 94  DTKIVASCGQGPSDGESHQIRIWDVATGQELQRLTGHTRDVRWVTFSPDGRTLASAGFDG 153

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY----SVDL 289
                + L D    +    I    +      F   GKR             Y      D+
Sbjct: 154 ----TIRLWDLARGKEISSINAHNNYAERVFFLPGGKRIASCGAFPPNDPAYGGLRVWDV 209

Query: 290 QSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVM 331
            S    R       +       + SPD +     S RE   +L+  
Sbjct: 210 TSGQQVR--TWRGFDARGLIGLAVSPDGTY-ALASSREKTVRLWKF 252


>gi|332832864|ref|XP_001143067.2| PREDICTED: WD repeat-containing protein 38 isoform 1 [Pan
           troglodytes]
          Length = 314

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 52/160 (32%), Gaps = 8/160 (5%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +  T   R  K  G     + +  FS +G+  L +  +D  +  +          RL   
Sbjct: 5   VPATLAVRRVKFFGQHGGEVNSSAFSPDGQMLL-TGSEDGCVYGWET-RSGQLLWRLGGH 62

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   +SPD       S       + +     +   R+ +  + S     +SP    
Sbjct: 63  TGPVKFCRFSPDGHLFASASC---DCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQ 119

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSP 399
           +A   +        V    G   RLLV   + +Q+  +SP
Sbjct: 120 LASGGWDKRVMLWDVQS--GQMLRLLVGHRDSIQSSDFSP 157



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 52/151 (34%), Gaps = 9/151 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    FSP+ Q +   + D      VY  +TR  +   R+G     +   RF
Sbjct: 16  FFGQHGGEVNSSAFSPDGQMLLTGSEDG----CVYGWETRSGQLLWRLGGHTGPVKFCRF 71

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G     S   D  + ++ V  ++     L        + S+SPDS Q+         
Sbjct: 72  SPDG-HLFASASCDCTVRLWDV-ARAKCLRVLKGHQRSVETVSFSPDSRQLA---SGGWD 126

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +++ +         R+      S     +SP
Sbjct: 127 KRVMLWDVQSGQMLRLLVGHRDSIQSSDFSP 157



 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 73/226 (32%), Gaps = 20/226 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D   A    +     + +    FSP+ +++A   +D     RV L D +
Sbjct: 80  SASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDK----RVMLWDVQ 135

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT----ERLTNTL 301
             +  + +   R  I +  FS        +   D  + I+  DL++       + L    
Sbjct: 136 SGQMLRLLVGHRDSIQSSDFSPTVNCLA-TGSWDSTVRIW--DLRTGTPAVSHQALEGHS 192

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  YS         +     + +++ +   S      +          +SP    +
Sbjct: 193 GNISCLCYSASG----LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWL 248

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
           A    +G    + V   +  +    ++          ++P G+ L+
Sbjct: 249 A---SAGYSRMVKVWDCNTGKCLETLKGVLDVAHTCAFTPDGKILV 291



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 62/191 (32%), Gaps = 26/191 (13%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQI---IGKKFFSSPASWRKIAHTIS-------------- 159
            +           LWDV+  + +   +G +     + +    + ++              
Sbjct: 118 RQLASGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVRIWDLR 177

Query: 160 ----DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
                  +Q++ G  G+ +      S  + SG    ++ +     +++          + 
Sbjct: 178 TGTPAVSHQALEGHSGNISCLCYSASGLLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVK 237

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              FSP++  +A A Y       V + D    +  + +     +     F+ +GK  L+S
Sbjct: 238 SIAFSPDELWLASAGYSR----MVKVWDCNTGKCLETLKGVLDVAHTCAFTPDGK-ILVS 292

Query: 276 VQKDEAMDIYS 286
              D+     S
Sbjct: 293 GAADQTRRQIS 303


>gi|321262470|ref|XP_003195954.1| transcription corepressor [Cryptococcus gattii WM276]
 gi|317462428|gb|ADV24167.1| Transcription corepressor, putative [Cryptococcus gattii WM276]
          Length = 881

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 74/239 (30%), Gaps = 39/239 (16%)

Query: 218 RFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNG 269
              P+  ++A    D +      +  + +   + +  PK +    +    +L+ R++ +G
Sbjct: 26  SVHPDGTRLATGGLDHKVKIWSTLPILDVEAEKEEENPKLLCTMSSHTGSVLSVRWAHHG 85

Query: 270 KRALISVQKDEAMDIYSVDLQSNA---------------TERLTNTLFINISASYSPDSS 314
           +    +   D+ + I+ +D                      RL   +   +  ++S D +
Sbjct: 86  RFLA-TGSDDQVIMIWGLDPDGGGRLWGSDEVNVENWKALTRLVGHVADVVDLAWSRDDT 144

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +           +++      ++ R     +       W P G+ +A T+   +   I 
Sbjct: 145 MLA---SVGLDSTVWIWDGLTFERLRKLDLHQGFVKGVCWDPVGNYLA-TQSDDKTVKIW 200

Query: 375 VMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               +       +      +P        +WSP G  +  +             ID  G
Sbjct: 201 --NTEDWSLAETISKPFETSPQSTFFRRLSWSPDGAFIA-ASNAMNGPVFVAAVIDREG 256


>gi|315501039|ref|YP_004079926.1| wd40-like beta propeller containing protein [Micromonospora sp. L5]
 gi|315407658|gb|ADU05775.1| WD40-like beta Propeller containing protein [Micromonospora sp. L5]
          Length = 321

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             S +G+  + +V  D    ++SVD+++    R+          S+SPD  + V+ 
Sbjct: 255 AVSPDGRSVIAAVASDHVGGVWSVDVRTGKKTRI-AGGARAYHPSFSPDGKRFVYV 309



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 1/75 (1%)

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            + GS   R   +      D   SP G  +     S     +  +     ++  +   + 
Sbjct: 235 WAVGSATARFITELPG-LADLAVSPDGRSVIAAVASDHVGGVWSVDVRTGKKTRIAGGAR 293

Query: 392 LQAPTWSPSGRSLIF 406
              P++SP G+  ++
Sbjct: 294 AYHPSFSPDGKRFVY 308



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 32/102 (31%), Gaps = 13/102 (12%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +          D    +    + S     +T    +    + SPD   ++     
Sbjct: 221 PEVSPD----------DLTWHLTEWAVGSATARFITELPGL-ADLAVSPDGRSVIAAVAS 269

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +    ++ +      + RI+    A  + P +SP G    + 
Sbjct: 270 DHVGGVWSVDVRTGKKTRIA--GGARAYHPSFSPDGKRFVYV 309



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  + +       +  R + E   L     SP GRS+I       D    ++S+D+
Sbjct: 223 VSPDDLTWHLTEWAVGSATARFITELPGLADLAVSPDGRSVI--AAVASDHVGGVWSVDV 280

Query: 424 NGRNETLINTPAYASDPQWVG 444
               +T I   A A  P +  
Sbjct: 281 RTGKKTRIAGGARAYHPSFSP 301


>gi|170751631|ref|YP_001757891.1| YVTN beta-propeller repeat-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170658153|gb|ACB27208.1| 40-residue YVTN family beta-propeller repeat protein
           [Methylobacterium radiotolerans JCM 2831]
          Length = 478

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 75/209 (35%), Gaps = 26/209 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----------RFSSNGK 270
           + +   Y +    + + V            R+G+   M L+P            FS + +
Sbjct: 34  SGKDRFYTSDQFSNTVSVVDPAANTLLGVIRLGDPTPMNLSPLYRGQLLVHGMGFSPDHR 93

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             L       +  +  +D  +NA             A ++PD  + V+ S R G++ + V
Sbjct: 94  TLLAVSI--GSNSVSFIDTATNAVRHTAYVGRSPHEAFFTPDGRE-VWVSVR-GEDHIAV 149

Query: 331 MQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--V 387
           + +  + + +RI+          ++SP G            F+   +  D     ++  V
Sbjct: 150 LDAATAKETRRITVPNGPGMT--IFSPDGTYGYVCS----SFSPETVVIDTKTHTIVGRV 203

Query: 388 EDSNLQAPTWS--PSGRSLIFSRKKDGDT 414
           +  +   P  +  P G+ + F+ K  G T
Sbjct: 204 KQESPFCPDIAATPDGKQVWFTLKDVGRT 232



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 72/192 (37%), Gaps = 16/192 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+ ++V + +   ED + V    T  +     + N   M +   FS +G    +    
Sbjct: 130 FTPDGREV-WVSVRGEDHIAVLDAATAKETRRITVPNGPGMTI---FSPDGTYGYVCSS- 184

Query: 279 DEAMDIYSVDLQS----NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             + +   +D ++       ++  +    +I+A+  PD  Q+ F     G+ Q++  +  
Sbjct: 185 -FSPETVVIDTKTHTIVGRVKQ-ESPFCPDIAAT--PDGKQVWFTLKDVGRTQVFSARPP 240

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            +  K I      ++ + V +  G   A+    G    + V + D   +   +    L  
Sbjct: 241 FAPLKTIETGPITNHVNIVSTKAGQF-AYVTI-GGLNQVKVFRTDDFSQVATIATGALPH 298

Query: 395 PTW-SPSGRSLI 405
             W S  G  + 
Sbjct: 299 GLWPSGDGSRVY 310



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 54/168 (32%), Gaps = 19/168 (11%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISA 307
           P   G       AP    +GK    +  +            +      RL +   +N+S 
Sbjct: 16  PALAGQAPGAASAPDVPVSGKDRFYTSDQFSNTVSVVDPAANTLLGVIRLGDPTPMNLSP 75

Query: 308 S-----------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                       +SPD   ++  S   G   +  + +  +  +  +    + +    ++P
Sbjct: 76  LYRGQLLVHGMGFSPDHRTLLAVSI--GSNSVSFIDTATNAVRHTAYVGRSPHEAF-FTP 132

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRS 403
            G  + +    GE   I V+    ++E R +   +      +SP G  
Sbjct: 133 DGREV-WVSVRGED-HIAVLDAATAKETRRITVPNGPGMTIFSPDGTY 178


>gi|307299474|ref|ZP_07579274.1| WD40 domain protein beta Propeller [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306914873|gb|EFN45260.1| WD40 domain protein beta Propeller [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 661

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 98/279 (35%), Gaps = 39/279 (13%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDE 234
           ++ ++ +       K    V+  D A    L  S D+     P +SP+ +K+A+      
Sbjct: 28  KLAYILKRADWNTNKYLQTVVVYDAAIKTALHVSNDEFDCSLPDWSPDSKKLAFLQKTGG 87

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS--NGKRALISVQKDEAMDIYSVDLQSN 292
           +     ++    ++   ++  F + I   ++S   +G   + +  + + +          
Sbjct: 88  ENKNDVMIFDFEEKRTFKLLTFENDISQIKWSRKNDGLYLVAASPESDELK--------K 139

Query: 293 ATERLTNTLFINISASYSPDSSQIVFE---------SDREGKEQLYVMQSNGSDQKRISQ 343
             E      +I+      P +S + F          S R    +   M+S  +   +++ 
Sbjct: 140 RKENYGEFEYIDEE----PKNSSLFFIHLSRAMKKYSSRFELPKD--MRSEETLFDKLTD 193

Query: 344 DKEASYFDPVWSPQGDLIAF----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---T 396
           +KE        SP G+ +A     T    +     VM  D   ER L E    + P    
Sbjct: 194 EKEFHVSSISLSPDGNYVALMAPPTSDVNDFDEARVMLID--SERKLKELP-FKHPRGFV 250

Query: 397 WSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNETLIN 432
           +SP  + L        D       +  +DL+  ++  IN
Sbjct: 251 FSPDSKELAVVVPDGEDPWMDNGAIEIVDLSNLSKERIN 289



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 42/102 (41%), Gaps = 8/102 (7%)

Query: 350 FDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGR 402
            +PV SP G  +A+      ++  K+   V+  D + +  L    ++ +   P WSP  +
Sbjct: 18  NNPVISPDGKKLAYILKRADWNTNKYLQTVVVYDAAIKTALHVSNDEFDCSLPDWSPDSK 77

Query: 403 SLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWV 443
            L F +K  G+  + +   D    R   L+      S  +W 
Sbjct: 78  KLAFLQKTGGENKNDVMIFDFEEKRTFKLLTFENDISQIKWS 119



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 73/182 (40%), Gaps = 20/182 (10%)

Query: 259 MILAPRFSSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDS 313
            + +   S +G    +    +   ++  +   + + S    +L    F       +SPDS
Sbjct: 198 HVSSISLSPDGNYVALMAPPTSDVNDFDEARVMLIDS--ERKLKELPFKHPRGFVFSPDS 255

Query: 314 SQIVFESDREG------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            ++      +G         + ++  +   ++RI+ + + +     W+ +G  +++    
Sbjct: 256 KELA-VVVPDGEDPWMDNGAIEIVDLSNLSKERINVEDDLNVELVSWTERGFFVSWI--E 312

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               ++G++  +G  ERL  +D  + A + +  G  +  +   + +   ++Y   LNG+ 
Sbjct: 313 NSTISLGLLDMNGHLERLTDQDELVLASSVTYDGEHIATAMGTNAEP-LEIY---LNGKK 368

Query: 428 ET 429
            T
Sbjct: 369 IT 370


>gi|188989661|ref|YP_001901671.1| exported prolyl oligopeptidase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|167731421|emb|CAP49596.1| exported prolyl oligopeptidase [Xanthomonas campestris pv.
           campestris]
          Length = 697

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 64/172 (37%), Gaps = 9/172 (5%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINI-SASYSPDSSQIVFE 319
           + R S +GK        D  ++++   + + +    +T      I S  ++  S  +++ 
Sbjct: 61  SVRISPDGKYLSWVAPLDGVLNVWVAPVDAPDKARAITKDTARGIRSYYWTYHSDTLLYL 120

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIG 374
            D  G E   LY +  +    K ++  K+ +      S   P   ++       +   + 
Sbjct: 121 RDTGGDEDFHLYAVNLSDGSSKDLTPFKKTNAEVYGISDQHPDAIMVGMNDRDAKWHDLY 180

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSIDLNG 425
            +    S  R LV+ +     ++   G   L ++ +   D G +L   + NG
Sbjct: 181 KVDLA-SGTRNLVQKNTDSLDSYLLDGNYQLRYATRATDDAGRELLVPEGNG 231



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 4/92 (4%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDS--NLQAPTWSPSG 401
                     SP G  +++         + V   D   + R + +D+   +++  W+   
Sbjct: 55  GNPERASVRISPDGKYLSWVAPLDGVLNVWVAPVDAPDKARAITKDTARGIRSYYWTYHS 114

Query: 402 RSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
            +L++ R   GD    LY+++L +G ++ L  
Sbjct: 115 DTLLYLRDTGGDEDFHLYAVNLSDGSSKDLTP 146


>gi|158523127|ref|YP_001530997.1| WD40 domain-containing protein [Desulfococcus oleovorans Hxd3]
 gi|158511953|gb|ABW68920.1| WD40 domain protein beta propeller [Desulfococcus oleovorans Hxd3]
          Length = 548

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/313 (15%), Positives = 86/313 (27%), Gaps = 83/313 (26%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDE-------DILRVYLMDTRIDRAPKRIG----NFR 257
             +     P  S   + VA+ +Y              +++ DT+     + +        
Sbjct: 173 GANGNSAYPSISFGGRYVAFQSYATNLTDDGATSYSAIFIRDTQEGATTRIMAYGGAQPD 232

Query: 258 SMILAPRFSSNGKRALISVQKD----------EAMDIYSVDLQSNATE------------ 295
           +    P  S +G       +               +IY  D  S A E            
Sbjct: 233 NNSYYPAISGDGSAVGFQSRASNLLEANNPDTGDQNIYVYDTASGAIELISRAYGSALSE 292

Query: 296 RLTNTLFIN---ISASYSPDSSQIVFESD--------REGKEQLYVMQSNGSDQKRI--- 341
            +T T   N    +   S     + F S           G+ Q+YV      +       
Sbjct: 293 EITPTYGANGGCDNPVISYGGRYVAFYSYATNLVYGGSNGEYQVYVYDRTSGEMVVASAE 352

Query: 342 ---SQDKEASYFDPVWSPQGDLIAFTKF-----------SGEKFAIGVMK---------- 377
              + +   +   P  SP G  +AF              +   + + +            
Sbjct: 353 DGGTSEGNNTSDRPSISPDGRYVAFRSQATNLVTDVTEYTSSDYLVFLRDTVDQKTTLIS 412

Query: 378 ----KDGSQERLLVEDSNLQAPTWSPSGRSLIF----SRKKDGDT--GSKLYSI--DLNG 425
                 G  E  +       AP+ S  G  + F    S   +GDT   S ++ +  D +G
Sbjct: 413 RIDNTVGGYEAGVYGGGINNAPSVSDCGMYVAFGAAGSYFVEGDTNGNSDIFRVLNDTDG 472

Query: 426 RNETLINTPAYAS 438
                ++T    +
Sbjct: 473 DGIGDMDTDGDGT 485



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/300 (12%), Positives = 70/300 (23%), Gaps = 84/300 (28%)

Query: 207 TPSRDQILFEPRFSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           +   D   + P  S + + +A+          D  D   ++L DT        + +  + 
Sbjct: 45  STQGDGDSYRPSISADGRYIAFESEASTLVDGDINDSKDIFLRDTTEGTTT--LVSVAAS 102

Query: 260 ILAP------------RFSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLTNT 300
             AP              S +G+                    ++  D     T  ++  
Sbjct: 103 YGAPYGYGADLGSSSSAISGDGQYVAFDSNATNLVAGGTYGQQVFVRDTVGGTTALVSPN 162

Query: 301 ------------LFINISASYSPDSSQIVFESD--------REGKEQLYVMQSNGSDQKR 340
                          +   S S     + F+S               +++  +      R
Sbjct: 163 YGGTYGAHGYGANGNSAYPSISFGGRYVAFQSYATNLTDDGATSYSAIFIRDTQEGATTR 222

Query: 341 ISQDKEA----SYFDPVWSPQGDLIAFTKF----------SGEKFAIGVMKKDGSQERLL 386
           I     A    + + P  S  G  + F                   I V         L+
Sbjct: 223 IMAYGGAQPDNNSYYPAISGDGSAVGFQSRASNLLEANNPDTGDQNIYVYDTASGAIELI 282

Query: 387 V----------------EDSNLQAPTWSPSGRSLIFSRK-----KDGDTG-SKLYSIDLN 424
                             +     P  S  GR + F          G  G  ++Y  D  
Sbjct: 283 SRAYGSALSEEITPTYGANGGCDNPVISYGGRYVAFYSYATNLVYGGSNGEYQVYVYDRT 342



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 49/187 (26%), Gaps = 45/187 (24%)

Query: 298 TNTLFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRIS------- 342
           T     +   S S D   I FES        D    + +++  +       +S       
Sbjct: 46  TQGDGDSYRPSISADGRYIAFESEASTLVDGDINDSKDIFLRDTTEGTTTLVSVAASYGA 105

Query: 343 ---QDKEASYFDPVWSPQGDLIAFTKF-----SGEKF--AIGVMKKDGSQERLLV----- 387
                 +        S  G  +AF        +G  +   + V    G    L+      
Sbjct: 106 PYGYGADLGSSSSAISGDGQYVAFDSNATNLVAGGTYGQQVFVRDTVGGTTALVSPNYGG 165

Query: 388 --------EDSNLQAPTWSPSGRSLIFSRK------KDGDTGSKLYSIDL-NGRNETLIN 432
                    + N   P+ S  GR + F             + S ++  D   G    ++ 
Sbjct: 166 TYGAHGYGANGNSAYPSISFGGRYVAFQSYATNLTDDGATSYSAIFIRDTQEGATTRIMA 225

Query: 433 TPAYASD 439
                 D
Sbjct: 226 YGGAQPD 232



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 34/116 (29%), Gaps = 25/116 (21%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERLLVEDSNLQ 393
           S   +   + P  S  G  IAF   +         +   I +         L+   ++  
Sbjct: 45  STQGDGDSYRPSISADGRYIAFESEASTLVDGDINDSKDIFLRDTTEGTTTLVSVAASYG 104

Query: 394 AP------------TWSPSGRSLIFSRK-----KDGDTGSKLYSIDLNGRNETLIN 432
           AP              S  G+ + F          G  G +++  D  G    L++
Sbjct: 105 APYGYGADLGSSSSAISGDGQYVAFDSNATNLVAGGTYGQQVFVRDTVGGTTALVS 160


>gi|324997831|ref|ZP_08118943.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Pseudonocardia sp. P1]
          Length = 621

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 36/78 (46%), Gaps = 3/78 (3%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAF 363
            +A+ SPD ++I + +  +G+  ++V   +G  + R ++ D+  +     WS     + +
Sbjct: 19  TAATISPDGTRIAYLAPWKGRLNVWVSDVDGGTEPRCVTADETRTVQRYHWSDDPRWLLY 78

Query: 364 TKFSGE--KFAIGVMKKD 379
            +  G    + +  +  D
Sbjct: 79  LQDDGGDENWHVHRVDLD 96



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLV--EDSNLQAPTWSPSGRSLIFSRKK 410
            SP G  IA+      +  + V   DG  + R +   E   +Q   WS   R L++ +  
Sbjct: 23  ISPDGTRIAYLAPWKGRLNVWVSDVDGGTEPRCVTADETRTVQRYHWSDDPRWLLYLQDD 82

Query: 411 DGDTGSKLYSIDLN 424
            GD    ++ +DL+
Sbjct: 83  GGDENWHVHRVDLD 96



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 18/143 (12%), Positives = 45/143 (31%), Gaps = 9/143 (6%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISA-SYSPDSSQIVF 318
            A   S +G R          ++++  D+      R +T      +    +S D   +++
Sbjct: 19  TAATISPDGTRIAYLAPWKGRLNVWVSDVDGGTEPRCVTADETRTVQRYHWSDDPRWLLY 78

Query: 319 ESDREG--KEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQ--GDLIA-FTKFSGEKF 371
             D  G     ++ +  + +D     ++    A+       P   G  +         +F
Sbjct: 79  LQDDGGDENWHVHRVDLDDADAPAVDLTPYPGATAVGLELRPGRPGRAVLQLNARVPTEF 138

Query: 372 AIGVMKKDGSQERLLVEDSNLQA 394
            +  +     +  +L E     +
Sbjct: 139 DLCELDIASGELTVLAESPGPGS 161


>gi|320009957|gb|ADW04807.1| putative peptidase [Streptomyces flavogriseus ATCC 33331]
          Length = 634

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/175 (13%), Positives = 53/175 (30%), Gaps = 9/175 (5%)

Query: 260 ILAPRFS---SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +  P ++    +  RAL         ++Y+ D  +    ++T+          +PD   +
Sbjct: 29  VSLPDWAEDAPD--RALFVSNATGTYELYAWDRATGKQRQVTDRPNGTTDGVLTPDGRTV 86

Query: 317 VFESDREGKEQLYVM--QSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAI 373
            + +D +G E    M     G   +  +   E  Y         G  +       +   +
Sbjct: 87  WWFADTDGDEFGVWMRQPFEGGPDEPATPGLEPFYPAGLAIGRDGTAVVGRSTDEDGTTV 146

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRN 427
            ++        +     +      S  G  +     + GD   S L  +  +G  
Sbjct: 147 HLVAPGADPVVIYRHRESAGVGDLSHDGTLIALEHTEHGDAMHSALRVVRPDGST 201



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 81/250 (32%), Gaps = 20/250 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            ++    R   +  P ++ +    A    +      +Y  D    +  +++ +  +    
Sbjct: 18  PQWEQRFRAARVSLPDWAEDAPDRALFVSNATGTYELYAWDRATGKQ-RQVTDRPNGTTD 76

Query: 263 PRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNT--LFINISASYSPDSSQIVF 318
              + +G+        D       +    +    E  T     F     +   D + +V 
Sbjct: 77  GVLTPDGRTVWWFADTDGDEFGVWMRQPFEGGPDEPATPGLEPFYPAGLAIGRDGTAVVG 136

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGV 375
            S  E    ++++ + G+D   I + +E S      S  G LIA            A+ V
Sbjct: 137 RSTDEDGTTVHLV-APGADPVVIYRHRE-SAGVGDLSHDGTLIALEHTEHGDAMHSALRV 194

Query: 376 MKKDGSQERLL--VEDSNLQ----APTWSP---SGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           ++ DGS    L   E    +       ++P     R L+   ++ G     ++      +
Sbjct: 195 VRPDGSTVAELDDTEGGTKELGLAVLGFAPVAGDTRLLV-GHQRRGRWEPMIWDPVTGTQ 253

Query: 427 NETLINTPAY 436
            +  ++ P  
Sbjct: 254 TDLPVDLPGD 263


>gi|304569679|ref|YP_009490.2| hypothetical protein DVU0266 [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311232555|gb|ADP85409.1| hypothetical protein Deval_0238 [Desulfovibrio vulgaris RCH1]
          Length = 418

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/248 (18%), Positives = 77/248 (31%), Gaps = 29/248 (11%)

Query: 175 SRILFVSESVVSGIIKNSLC--VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + +       V+  ++ SL    +  DG       P     ++EP F P    VA     
Sbjct: 194 TPVFDTHGRRVAAQVRLSLYDYTIAVDGEPWPVTFP----CVWEPVFDPATGSVAAPVRK 249

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           D            +D       +F      PRFS +G+R    V  D      + D    
Sbjct: 250 DGR------WGMALDGNLIWPASFF-QCWHPRFSPDGRRLWAIVAPDYGSFTVACDG--- 299

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                 N   +      SPD S+     + +      ++         +   +    + P
Sbjct: 300 --IPWGNRFPVVSDLVLSPDGSRAAAVGNHDNTRFSVIVDDK------VWPGEWDMVWAP 351

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           V+S  G  +A     G+ F   V   DG   R     S    P + P G  L+    ++G
Sbjct: 352 VFSADGAHVAVKARKGDTFHFIV---DGKPWRE--GFSQAGTPVFGPDGDRLLMCGVQNG 406

Query: 413 DTGSKLYS 420
                + +
Sbjct: 407 AAVRHIVA 414


>gi|154244217|ref|YP_001415175.1| YVTN beta-propeller repeat-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154246607|ref|YP_001417565.1| YVTN beta-propeller repeat-containing protein [Xanthobacter
           autotrophicus Py2]
 gi|154158302|gb|ABS65518.1| 40-residue YVTN family beta-propeller repeat protein [Xanthobacter
           autotrophicus Py2]
 gi|154160692|gb|ABS67908.1| 40-residue YVTN family beta-propeller repeat protein [Xanthobacter
           autotrophicus Py2]
          Length = 478

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 70/196 (35%), Gaps = 24/196 (12%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----------RFSSNGKRALIS 275
            Y +    + + V    T       ++G      L+P            FS + K   + 
Sbjct: 39  FYTSDQFSNTVSVVDPSTNEVLGVIKLGEQTPANLSPLYRGQLLVHGMGFSPDHKTLAVI 98

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ-SN 334
                +  +  +D +SNA + +T        A + PD  + V+ S R G+  + V+   +
Sbjct: 99  SI--GSNSVSFIDTESNAVKHVTYVGRSPHEAFFRPDGKE-VWVSVR-GENYISVLDGQS 154

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            ++  RI+          ++SP G      + FS E     V+     +    V+  +  
Sbjct: 155 FTETGRITVPNGPGMT--IFSPDGRYGYVCSSFSPETV---VIDTATKEIVGRVKQESPF 209

Query: 394 APTWS--PSGRSLIFS 407
            P  +  P GR +  +
Sbjct: 210 CPDIAATPDGRQVWLT 225



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 65/193 (33%), Gaps = 18/193 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F P+ ++V + +   E+ + V    +  +     + N   M +   FS +G+   +    
Sbjct: 130 FRPDGKEV-WVSVRGENYISVLDGQSFTETGRITVPNGPGMTI---FSPDGRYGYVCSS- 184

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASY-----SPDSSQIVFESDREGKEQLYVMQS 333
             + +   +D  +              S        +PD  Q+       GK  ++  + 
Sbjct: 185 -FSPETVVIDTATKEIV----GRVKQESPFCPDIAATPDGRQVWLTLKDVGKVMVFDAKP 239

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             S  K I      ++ + V +P+G   A+    G    I V      ++   +   +L 
Sbjct: 240 PFSVFKVIDTGPITNHVNIVRNPKGQF-AYVTI-GGLNEIKVFDTSDYKQVATIPVGSLP 297

Query: 394 APTW-SPSGRSLI 405
              W S  G  + 
Sbjct: 298 HGLWPSGDGSRVY 310



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 40/124 (32%), Gaps = 20/124 (16%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +   S   G   +  + +  +  K ++    + +    + P G  + +    G
Sbjct: 88  FSPDHKTLAVISI--GSNSVSFIDTESNAVKHVTYVGRSPHEAF-FRPDGKEV-WVSVRG 143

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT------WSPSGRSLIFSRKKDGDTGSKLYSID 422
           E +   +   DG   +   E   +  P       +SP GR              +   ID
Sbjct: 144 ENY---ISVLDG---QSFTETGRITVPNGPGMTIFSPDGRYGYVCSS----FSPETVVID 193

Query: 423 LNGR 426
              +
Sbjct: 194 TATK 197


>gi|302899091|ref|XP_003047977.1| hypothetical protein NECHADRAFT_40224 [Nectria haematococca mpVI
           77-13-4]
 gi|256728909|gb|EEU42264.1| hypothetical protein NECHADRAFT_40224 [Nectria haematococca mpVI
           77-13-4]
          Length = 856

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 83/233 (35%), Gaps = 18/233 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    ++ +   D  +           + +   +P+ Q  A A+    D L V +++T+ 
Sbjct: 74  GSEDGTVSLYSLDTGSYERFLVRTSMPIRDVALTPDHQWCAVAS----DELTVKIVNTKD 129

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER----LTNTLF 302
               K +      +    F  +G+   +S   D  + +YS+  +     R    +  +L 
Sbjct: 130 ITQVKHLREHGRAVRHVSFDPHGRLIALSGT-DGIVYVYSLTAEEPELIRKVDGIIASLD 188

Query: 303 INISAS----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +  AS    + PD     F      K+   + +++   Q+  +    A      WSP G
Sbjct: 189 GDGEASTQVAWHPDGR--AFAVPTPVKDIQIISKNDWEKQRTFANGHLADITALAWSPNG 246

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            ++A     G K  I   K  G   R   + SN+    W P+   + F+    
Sbjct: 247 SMLASASKDG-KLLIWETKTQGVIAR--YDYSNVIDLAWHPTKNLISFTTTDG 296



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 67/175 (38%), Gaps = 21/175 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR----IGNFRSMILA 262
                + +    F P+ + +A +  D   I+ VY +        ++    I +      A
Sbjct: 136 LREHGRAVRHVSFDPHGRLIALSGTD--GIVYVYSLTAEEPELIRKVDGIIASLDGDGEA 193

Query: 263 P---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQI 316
                +  +G+   +        DI  +       ++ T     L    + ++SP+ S +
Sbjct: 194 STQVAWHPDGRAFAV---PTPVKDIQIISKND-WEKQRTFANGHLADITALAWSPNGSML 249

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              S ++GK  ++  ++ G     I++   ++  D  W P  +LI+FT   GE +
Sbjct: 250 ASAS-KDGKLLIWETKTQG----VIARYDYSNVIDLAWHPTKNLISFTTTDGEVY 299


>gi|163851759|ref|YP_001639802.1| WD-40 repeat-containing protein [Methylobacterium extorquens PA1]
 gi|240138924|ref|YP_002963399.1| WD-40 repeat family protein [Methylobacterium extorquens AM1]
 gi|163663364|gb|ABY30731.1| WD-40 repeat protein [Methylobacterium extorquens PA1]
 gi|240008896|gb|ACS40122.1| WD-40 repeat family protein [Methylobacterium extorquens AM1]
          Length = 335

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/271 (16%), Positives = 91/271 (33%), Gaps = 20/271 (7%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G +  S     R +A        +    + G +   +    +   +     ++   D  G
Sbjct: 66  GARLVSGGDDGRVVATAADGRSSELAQAKGGGWIDALALHGDGSFAFASGRAIVARDAKG 125

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                  P+  + L    F+P   ++A A Y+      V L    ++  P+ I  ++   
Sbjct: 126 REKTLTAPTTGRGL---AFAPKGYRLAVAHYNG-----VSLWYPNLETPPEFI-EWKGSH 176

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           L   +S +G+  + ++Q++ A+  + +        R++       S S+S D   +    
Sbjct: 177 LDVTWSPDGRFVVSTMQEN-ALHGWRLQPDRGHM-RMSGYPAKVRSLSWSSDGKWLA--- 231

Query: 321 DREGKEQLYVMQSN-----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              G E   V   +          R    + A      + P+  ++A     G    +  
Sbjct: 232 -TSGAEAAIVWPFDSKEGPTGKAPRECGVRPARVSQVAFHPKAPVLAIGYEDGCVLLVRF 290

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                   R  V+ S + A  W P+G  L F
Sbjct: 291 SDASELLVRPAVKGSAISALAWDPAGARLAF 321



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 79/183 (43%), Gaps = 18/183 (9%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           +S+G R + S   D  +   + D +S+   +     +I+  A    D S   F S R   
Sbjct: 63  ASDGARLV-SGGDDGRVVATAADGRSSELAQAKGGGWIDALA-LHGDGS-FAFASGRA-- 117

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             +    + G ++   +     +     ++P+G  +A   ++G   ++     +   E +
Sbjct: 118 --IVARDAKGREK---TLTAPTTGRGLAFAPKGYRLAVAHYNG--VSLWYPNLETPPEFI 170

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS----IDLNGRNETLINTPAYASDPQ 441
             + S+L   TWSP GR ++ + +++   G +L      + ++G    + +  +++SD +
Sbjct: 171 EWKGSHLDV-TWSPDGRFVVSTMQENALHGWRLQPDRGHMRMSGYPAKVRSL-SWSSDGK 228

Query: 442 WVG 444
           W+ 
Sbjct: 229 WLA 231



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 66/221 (29%), Gaps = 22/221 (9%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-----YDDEDILRVYLMDT 244
           K +L +   DG     +  +RD  +      P+   +  A+         D  RV     
Sbjct: 28  KGTLALALADGG----VLLARDGAIETVSAHPDSGILVAASDGARLVSGGDDGRVVATAA 83

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
               +          I A     +G  A  S +      I + D +      LT      
Sbjct: 84  DGRSSELAQAKGGGWIDALALHGDGSFAFASGRA-----IVARDAKGREKT-LTA-PTTG 136

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +++P   ++              +     +      + + S+ D  WSP G  +  T
Sbjct: 137 RGLAFAPKGYRLAVA-----HYNGVSLWYPNLETPPEFIEWKGSHLDVTWSPDGRFVVST 191

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                     +   D    R+    + +++ +WS  G+ L 
Sbjct: 192 MQENALHGWRLQ-PDRGHMRMSGYPAKVRSLSWSSDGKWLA 231


>gi|153864837|ref|ZP_01997599.1| beta transducin-like protein [Beggiatoa sp. SS]
 gi|152145669|gb|EDN72402.1| beta transducin-like protein [Beggiatoa sp. SS]
          Length = 341

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 79/243 (32%), Gaps = 17/243 (6%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S++V+SG   N+L   + +              ++    S    + A  +   ++  R  
Sbjct: 9   SQAVLSGSADNTLKRWNTETGKEVDTFQRNIGWVYSIALSNKTNR-AILSGSRDNTPR-- 65

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L +T             + +     S +  +  +S  ++  + ++   +++         
Sbjct: 66  LWNTLNGSEIDTFQGHTNEVYLVAVSDDASK-ALSASEEGTLKVW--HVETGKEIHTIKN 122

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S ++S D SQI+       K  + +  S    + R  +      +   +SP    
Sbjct: 123 NDHVWSVAFSHDGSQIL---SGGEKGTVKLFDSESGQEIRSFKGLSGRVYSVAFSPDASR 179

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKL 418
           +      G    I V   +   E   ++       +  +SP G  ++       D   KL
Sbjct: 180 VVSGGHDGT---IKVWDINSGNEIHTLKGHTDIVSSIVFSPDGSQILSGSY---DNSLKL 233

Query: 419 YSI 421
           + +
Sbjct: 234 WQM 236



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 56/180 (31%), Gaps = 23/180 (12%)

Query: 129 RLWDVKDRKQI------------------IGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           RLW+  +  +I                    K   +S     K+ H  +     +I    
Sbjct: 65  RLWNTLNGSEIDTFQGHTNEVYLVAVSDDASKALSASEEGTLKVWHVETGKEIHTIKNND 124

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             ++         ++SG  K ++ + D +              ++   FSP+  +V    
Sbjct: 125 HVWSVAFSHDGSQILSGGEKGTVKLFDSESGQEIRSFKGLSGRVYSVAFSPDASRVV--- 181

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                   + + D         +     ++ +  FS +G + L S   D ++ ++ +   
Sbjct: 182 -SGGHDGTIKVWDINSGNEIHTLKGHTDIVSSIVFSPDGSQIL-SGSYDNSLKLWQMPTA 239


>gi|86144088|ref|ZP_01062426.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
 gi|85829548|gb|EAQ48012.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
          Length = 638

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 78/211 (36%), Gaps = 53/211 (25%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +    AP F   G++ L S  +D  +        +    +  N  F++            
Sbjct: 156 KYSDFAPAFY--GEQLLFSSTRDTGVF-------TRRVHKWNNQPFLD------------ 194

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---------- 366
           ++  D + + Q+  +   G        + E      V SP G+ + FT+           
Sbjct: 195 LYVGDIDDQNQVNTVSKLGGSV-----NTEFHESTAVLSPDGNALYFTRNNFTKDQYRAD 249

Query: 367 SGEKFAIGVMKKD------GSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTG-SK 417
           S +   + + K        G+ E L   D++     P  +P G++L F+  + G  G S 
Sbjct: 250 SNKTNRLKLYKAAKTAEGLGAIEELPFNDNSFSTAHPAITPDGKTLYFASDRPGSLGESD 309

Query: 418 LY--SIDLNGRNETL------INTPAYASDP 440
           L+  +I+ +G   T+      INTP   + P
Sbjct: 310 LWKVAINEDGSFGTVENLGDKINTPGRETFP 340



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 73/231 (31%), Gaps = 39/231 (16%)

Query: 142 KKFFSSPASWRKIAHTISDD-IYQSITGEKGDFNSRIL------FVSESVVSGIIKNSLC 194
           +K  ++ A +   A     + +  S T + G F  R+       F+   V     +N + 
Sbjct: 148 EKLKANAAKYSDFAPAFYGEQLLFSSTRDTGVFTRRVHKWNNQPFLDLYVGDIDDQNQVN 207

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-EDILRVYLMDTRIDRAPKRI 253
            + + G ++         +L     SP+   + +   +  +D  R     T   +  K  
Sbjct: 208 TVSKLGGSVNTEFHESTAVL-----SPDGNALYFTRNNFTKDQYRADSNKTNRLKLYKAA 262

Query: 254 GNFRSM--------------ILAPRFSSNGKRALISVQKDEAM---DIYSV----DLQSN 292
                +                 P  + +GK    +  +  ++   D++ V    D    
Sbjct: 263 KTAEGLGAIEELPFNDNSFSTAHPAITPDGKTLYFASDRPGSLGESDLWKVAINEDGSFG 322

Query: 293 ATERL---TNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQK 339
             E L    NT         S D  ++ F +D R G   L V   +   + 
Sbjct: 323 TVENLGDKINTPGRETFPFISKDG-KLYFSTDGRAGLGGLDVYVYDFESET 372



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 15/141 (10%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG----- 254
           GA               P  +P+ + + +A+     +    L    I+            
Sbjct: 269 GAIEELPFNDNSFSTAHPAITPDGKTLYFASDRPGSLGESDLWKVAINEDGSFGTVENLG 328

Query: 255 ---NFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERLT---NTLFINI 305
              N       P  S +GK    S         +D+Y  D +S   E +    N+   + 
Sbjct: 329 DKINTPGRETFPFISKDGK-LYFSTDGRAGLGGLDVYVYDFESETLENVGAPVNSTKDDF 387

Query: 306 SASYSPDSSQIVFESDREGKE 326
           +   + D+ +  F S+R    
Sbjct: 388 TFIINSDTGKGFFASNRANDP 408


>gi|58270988|ref|XP_572650.1| transcription corepressor [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134115064|ref|XP_773830.1| hypothetical protein CNBH2820 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|74683269|sp|Q5KBD2|HIR1_CRYNE RecName: Full=Protein HIR1
 gi|50256458|gb|EAL19183.1| hypothetical protein CNBH2820 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57228909|gb|AAW45343.1| transcription corepressor, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 881

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/239 (12%), Positives = 74/239 (30%), Gaps = 39/239 (16%)

Query: 218 RFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNG 269
              P+  ++A    D +      +  + +   + +  PK +    +    +L+ R++ +G
Sbjct: 26  SVHPDGTRLATGGLDHKVKIWSTLPILDVEAEKEEENPKLLCTMSSHTGSVLSVRWAHHG 85

Query: 270 KRALISVQKDEAMDIYSVDLQSNA---------------TERLTNTLFINISASYSPDSS 314
           +    +   D+ + I+ +D                      RL   +   +  ++S D +
Sbjct: 86  RFLA-TGSDDQVIMIWGLDPDGGGRLWGSDEINVENWKALTRLVGHVADVVDLAWSRDDT 144

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +           +++      ++ R     +       W P G+ +A T+   +   I 
Sbjct: 145 MLA---SVGLDSTVWIWDGLTFERLRKLDLHQGFVKGVCWDPVGNYLA-TQSDDKTVKIW 200

Query: 375 VMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               +       +      +P        +WSP G  +  +             ID  G
Sbjct: 201 --NTEDWSLAETISKPFETSPQSTFFRRLSWSPDGAFIA-ASNAMNGPVFVAAVIDREG 256


>gi|326799878|ref|YP_004317697.1| dipeptidyl-peptidase IV [Sphingobacterium sp. 21]
 gi|326550642|gb|ADZ79027.1| Dipeptidyl-peptidase IV [Sphingobacterium sp. 21]
          Length = 725

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/318 (14%), Positives = 104/318 (32%), Gaps = 54/318 (16%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD- 233
           +++L  ++S       +       D A+ +    S         FSP+  KVA+   ++ 
Sbjct: 103 TKVLIAADSEPIYRRSSKANYYVFDLASKKITEVSSKGKQQFATFSPDGSKVAFVRDNNI 162

Query: 234 --EDILRVYLMDTRIDRAPKRIGNFRSMIL---------APRFSSNGKRALISVQKDEAM 282
             +D+L +  +    D A  +I N  +  +         A  +SS+ K+       +  +
Sbjct: 163 FIKDLLNLQEVQITQDGASNKIINGGADWVYEEEFAFAKAFFWSSDSKKIAYYKFNETEV 222

Query: 283 DIYSVD------------------------------LQSNATERL-TNTLFINISAS--Y 309
            +YS+                               L    T R+              +
Sbjct: 223 SVYSMTIFEQLYPHEYQYKYPKAGEKNSIVSIHCYQLADGKTTRIDVGNEQNQYIPRIKW 282

Query: 310 SPDSSQI-VFESDREGKEQLYVM-QSNGSDQKRISQDKEASYFDP----VWSPQGDLIAF 363
           + + + + V   +R   +  Y+         K +  ++   Y +      +   G     
Sbjct: 283 TQNPNLLCVLRMNRHQNKLDYLFSDVTTGTSKVVLTEENKYYINVNDDLTFLQNGKQFLL 342

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSRKKDGDTGSKLYSI 421
           T        + +   DG++ R +   + L    +  + ++    +   +       +Y+I
Sbjct: 343 TSEHDGYNHLYLYDMDGNKIRQITAGAWLVTKLYGVNEKTGTAYYQSTEKSPLQRDIYAI 402

Query: 422 DLNGRN-ETLINTPAYAS 438
           D+ G+N + L N+P   S
Sbjct: 403 DVTGKNKKQLSNSPGTNS 420



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 66/180 (36%), Gaps = 31/180 (17%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS---- 275
           S  + K+AY    +    ++      I      I   + + L+  F+ +  + LI+    
Sbjct: 56  SNPETKIAYVAKSNYRDGKIVE---AIYTEKDIIFKGKKLPLSTDFNQDETKVLIAADSE 112

Query: 276 --VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              ++    + Y  DL S     + ++      A++SPD S++ F  D      +++   
Sbjct: 113 PIYRRSSKANYYVFDLASKKITEV-SSKGKQQFATFSPDGSKVAFVRD----NNIFIKDL 167

Query: 334 NGSDQKRISQDKEAS-----------------YFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
               + +I+QD  ++                      WS     IA+ KF+  + ++  M
Sbjct: 168 LNLQEVQITQDGASNKIINGGADWVYEEEFAFAKAFFWSSDSKKIAYYKFNETEVSVYSM 227



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/205 (17%), Positives = 74/205 (36%), Gaps = 16/205 (7%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPR--FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           C    DG   R +    +Q  + PR  ++ N   +     +       YL         K
Sbjct: 256 CYQLADGKTTR-IDVGNEQNQYIPRIKWTQNPNLLCVLRMNRHQNKLDYLFSDVTTGTSK 314

Query: 252 RIGN-----FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +       + ++     F  NGK+ L++ + D    +Y  D+  N   ++T   ++   
Sbjct: 315 VVLTEENKYYINVNDDLTFLQNGKQFLLTSEHDGYNHLYLYDMDGNKIRQITAGAWLVTK 374

Query: 307 AS-YSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLI 361
               +  +    ++S  +   Q  +Y +   G ++K++  S    ++ F   +S     I
Sbjct: 375 LYGVNEKTGTAYYQSTEKSPLQRDIYAIDVTGKNKKQLSNSPGTNSATFSTDFS---YYI 431

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLL 386
                +     I +  KDG   R+L
Sbjct: 432 LNHSDTHSPAYITLNDKDGRLVRVL 456



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 55/317 (17%), Positives = 111/317 (35%), Gaps = 72/317 (22%)

Query: 175 SRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-------FSPNQQK 225
           S++ FV ++ +    ++      + +DGA+ + +    D +  E         +S + +K
Sbjct: 152 SKVAFVRDNNIFIKDLLNLQEVQITQDGASNKIINGGADWVYEEEFAFAKAFFWSSDSKK 211

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKR-------------IGNFRSMILAPRFSSNGKRA 272
           +AY  + +E  + VY M       P               I +     LA     +GK  
Sbjct: 212 IAYYKF-NETEVSVYSMTIFEQLYPHEYQYKYPKAGEKNSIVSIHCYQLA-----DGKTT 265

Query: 273 LISVQKDEAMDIYSV--------------------------DLQSNATER-LT--NTLFI 303
            I V  ++   I  +                          D+ +  ++  LT  N  +I
Sbjct: 266 RIDVGNEQNQYIPRIKWTQNPNLLCVLRMNRHQNKLDYLFSDVTTGTSKVVLTEENKYYI 325

Query: 304 NIS--ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           N++   ++  +  Q +  S+ +G   LY+   +G+  ++I+              +    
Sbjct: 326 NVNDDLTFLQNGKQFLLTSEHDGYNHLYLYDMDGNKIRQIT-AGAWLVTKLYGVNEKTGT 384

Query: 362 AF---TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK--KDGDTGS 416
           A+   T+ S  +  I  +   G  ++ L       + T+S       FS       DT S
Sbjct: 385 AYYQSTEKSPLQRDIYAIDVTGKNKKQLSNSPGTNSATFSTD-----FSYYILNHSDTHS 439

Query: 417 KLYSI--DLNGRNETLI 431
             Y    D +GR   ++
Sbjct: 440 PAYITLNDKDGRLVRVL 456



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 33/113 (29%), Gaps = 12/113 (10%)

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
             +  +S D        + +   + I        K    V      +   +      Q  
Sbjct: 89  GKKLPLSTDFNQDETKVLIAADSEPIY---RRSSKANYYVFDLASKKITEVSSKGKQQFA 145

Query: 396 TWSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           T+SP G  + F R  +         +   I  +G +  +IN  A      WV 
Sbjct: 146 TFSPDGSKVAFVRDNNIFIKDLLNLQEVQITQDGASNKIINGGAD-----WVY 193


>gi|154284584|ref|XP_001543087.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150406728|gb|EDN02269.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 1436

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 71/220 (32%), Gaps = 16/220 (7%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIG- 254
            I          +    FSP+ + +  A+       ++ +      L   + D   ++   
Sbjct: 858  IHSTLEGHVDSVSSIAFSPDGEYIVSASLDKSIRLWEVKKGRSKILFGGKSDLLLEKTQS 917

Query: 255  -NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPD 312
             +F +      FS NG+     +       +   D ++N     L +  FI   A +S D
Sbjct: 918  LSFETPTNGTMFSPNGEFIAGYIHGLGHDQVQLWDAKTNCLVGALPHPRFILTLA-FSYD 976

Query: 313  SSQIVFESDREGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
               I   +  +G  +++  ++        ++            +SP G  IA        
Sbjct: 977  GKFIA-SACSDGTVRIWDPRTATLCGILTQVKSGYADCISPFAFSPDGQSIACISH--GA 1033

Query: 371  FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              I  +K       +  +   +   T+SP  R L  +  +
Sbjct: 1034 VEIWDLKSLSLCGTIENDTEAITCITFSPDSRLLAAASGR 1073



 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 72/206 (34%), Gaps = 22/206 (10%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+ Q +A  +  D+    + L D +       +      + +  FS +G+  + S   D
Sbjct: 832  SPDGQFLACTSNFDDK---IRLWDLKRVAIHSTLEGHVDSVSSIAFSPDGEYIV-SASLD 887

Query: 280  EAMDIYSVD------LQSNATERL---TNTLFINISAS---YSPDSSQIVFESDREGKEQ 327
            +++ ++ V       L    ++ L   T +L      +   +SP+   I       G +Q
Sbjct: 888  KSIRLWEVKKGRSKILFGGKSDLLLEKTQSLSFETPTNGTMFSPNGEFIAGYIHGLGHDQ 947

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERL 385
            + +  +  +     +           +S  G  IA +  S     I   +          
Sbjct: 948  VQLWDAKTNCLVG-ALPHPRFILTLAFSYDGKFIA-SACSDGTVRIWDPRTATLCGILTQ 1005

Query: 386  LVED-SNLQAP-TWSPSGRSLIFSRK 409
            +    ++  +P  +SP G+S+     
Sbjct: 1006 VKSGYADCISPFAFSPDGQSIACISH 1031



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 74/221 (33%), Gaps = 35/221 (15%)

Query: 252 RIGNFRSMILAPR-----FSSNGKRALISVQKDEAMDIYSVDLQSNATER----LTNTL- 301
           +I +      A       FS +G   + S        I + D  + A       ++ +  
Sbjct: 768 KISSMPGARNAAAIEDIFFSPDGDFLISS----GGNLINAWDTTTGAFRYAIPDISQSKF 823

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +      SPD   +   S+ +  +++ +            +    S     +SP G+ I
Sbjct: 824 ALKRQEVLSPDGQFLACTSNFD--DKIRLWDLKRVAIHSTLEGHVDSVSSIAFSPDGEYI 881

Query: 362 AFTKFSGEKFAIGVMKKD------GSQERLL---VEDSNLQAPT----WSPSGRSLIFSR 408
                  +   +  +KK       G +  LL    +  + + PT    +SP+G  +    
Sbjct: 882 VSASLD-KSIRLWEVKKGRSKILFGGKSDLLLEKTQSLSFETPTNGTMFSPNGEFIAGYI 940

Query: 409 KKDGDTGSKLYSIDLN---GR--NETLINTPAYASDPQWVG 444
              G    +L+    N   G   +   I T A++ D +++ 
Sbjct: 941 HGLGHDQVQLWDAKTNCLVGALPHPRFILTLAFSYDGKFIA 981


>gi|313204316|ref|YP_004042973.1| peptidase s9b dipeptidylpeptidase iv domain protein [Paludibacter
           propionicigenes WB4]
 gi|312443632|gb|ADQ79988.1| peptidase S9B dipeptidylpeptidase IV domain protein [Paludibacter
           propionicigenes WB4]
          Length = 747

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 93/291 (31%), Gaps = 41/291 (14%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR---DQILFEPRFSPNQQKVAYATYD 232
            ++   + + + +  N+L V D      + L+ S    D     P +SP+ +KVA     
Sbjct: 162 PVISPDKKLSAFVKDNNLYVKDLKTGIEKALSTSGTKEDYYSAYPYWSPDSKKVAVMRIH 221

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI------YS 286
             +  ++YL+++      +     R  +            +  +   +            
Sbjct: 222 GAETRQLYLIESSPADQFQPKLQTRDYVKPGDVLPARTPVIFDIASGDRKVASNDLFKSQ 281

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRI--- 341
           +DL+                  + PDS  ++FE ++ G +   V  M +   + K +   
Sbjct: 282 MDLKG---------------FEWLPDSKSVLFEYNQRGHQVYRVLEMSAETGEIKTLVEE 326

Query: 342 ---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTW 397
              +      YF    +  G  + +         + +     G+ +  + + +       
Sbjct: 327 TAKTFVNYTRYFRQTVN-NGKEMIWMSERDNWNHLYLYDRLTGTVKNQITKGAWYVRDVL 385

Query: 398 SPSGRS--LIFSRK----KDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           +   +   +IFS       +     + Y I  +G   T + TP       W
Sbjct: 386 NVDEKKREIIFSANGMKANEDPYLVRYYRIRFDGTGLTCL-TPEEGMHQAW 435



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 27/77 (35%), Gaps = 10/77 (12%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRSL 404
             PV SP   L AF K +     + V       E+ L      +      P WSP  + +
Sbjct: 160 GKPVISPDKKLSAFVKDN----NLYVKDLKTGIEKALSTSGTKEDYYSAYPYWSPDSKKV 215

Query: 405 IFSRKKDGDTGSKLYSI 421
              R   G    +LY I
Sbjct: 216 AVMR-IHGAETRQLYLI 231


>gi|171911705|ref|ZP_02927175.1| hypothetical protein VspiD_11035 [Verrucomicrobium spinosum DSM
           4136]
          Length = 405

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 70/254 (27%), Gaps = 35/254 (13%)

Query: 99  RFQDWNSLGAQVL-VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK-IAH 156
           R   W     QV+ + G+    G  R      L +V   +     K       +    + 
Sbjct: 157 RLSGWGQPQGQVVPLYGQHWNPGAHR---NLELVNVVTGEITTALKVEDVTQQYPDWFSK 213

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVV-----SGIIKNSLCVMDRDGANIRYLTPSRD 211
             +                R+ F   S       SG       ++  D  N R+L  +  
Sbjct: 214 AYAGKEVSIFFPVLSPKLDRVFFKMASASGPDPRSGAASVRQGLICYDLQNQRFLYQNER 273

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
                P + P+ + +   T+         + D+   ++ +  G   +    P  S +G+ 
Sbjct: 274 W--GHPSWHPDDRHIVETTFT--------IFDSDNGKSQRTPGLPVARGDHPSVSPDGRL 323

Query: 272 ALISVQKDEAMD------IYSVDLQSNA---TERLTNTLFINI------SASYSPDSSQI 316
            +     D          I   D +        +  N               +S D  +I
Sbjct: 324 LVTDTTMDRFGSDSNHWGIILADARGGQHLMLHQFQNNEGARSWRRSHPHPVFSADGRRI 383

Query: 317 VFESDREGKEQLYV 330
            F        +LYV
Sbjct: 384 YFNVSEGPWTRLYV 397



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 66/219 (30%), Gaps = 35/219 (15%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTP---SRDQILFEPRFSPNQQKVAYATYDDEDI--- 236
           +VV+G I  +L V D       + +     ++  +F P  SP   +V +           
Sbjct: 188 NVVTGEITTALKVEDVTQQYPDWFSKAYAGKEVSIFFPVLSPKLDRVFFKMASASGPDPR 247

Query: 237 ---LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                V       D   +R          P +  + +  +              D  +  
Sbjct: 248 SGAASVRQGLICYDLQNQRFLYQNERWGHPSWHPDDRHIV-------ETTFTIFDSDNGK 300

Query: 294 TERLTNTL--FINISASYSPDSSQIV-------FESDREGKEQLYVMQSNGSDQKRISQD 344
           ++R T  L        S SPD   +V       F SD      + +  + G     + Q 
Sbjct: 301 SQR-TPGLPVARGDHPSVSPDGRLLVTDTTMDRFGSD-SNHWGIILADARGGQHLMLHQF 358

Query: 345 KEA--------SYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +          S+  PV+S  G  I F    G    + V
Sbjct: 359 QNNEGARSWRRSHPHPVFSADGRRIYFNVSEGPWTRLYV 397



 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 44/130 (33%), Gaps = 25/130 (19%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA---- 362
            S+ PD   IV       +    +  S+    +R      A    P  SP G L+     
Sbjct: 277 PSWHPDDRHIV-------ETTFTIFDSDNGKSQRTPGLPVARGDHPSVSPDGRLLVTDTT 329

Query: 363 FTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQ----------APTWSPSGRSLIFSRKK 410
             +F  +    G++  D  G Q  +L +  N +           P +S  GR + F    
Sbjct: 330 MDRFGSDSNHWGIILADARGGQHLMLHQFQNNEGARSWRRSHPHPVFSADGRRIYF--NV 387

Query: 411 DGDTGSKLYS 420
                ++LY 
Sbjct: 388 SEGPWTRLYV 397



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 104/287 (36%), Gaps = 54/287 (18%)

Query: 198 RDGANIRYLTPSRDQILFEPRF-----SPNQQKVAY--ATYDDEDILRVYLMDTRIDRAP 250
           R G  IR ++P +D+      F     SP+  KV +  +T  D     V++ D +     
Sbjct: 41  RTGVRIRPVSPEKDRHTVHSYFNTCPESPDGSKVLFFVSTSPDSHTGEVWIRDRKTGEER 100

Query: 251 KRIGNFRS----MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINI 305
           +     ++     +   ++ + G+      ++D +  + +V++  +   ER+   L  + 
Sbjct: 101 RLSPLLKAEDAHRVTCQQWVNGGRTVSYHGERDGSWFVAAVNVDDSPPVERI---LAQDR 157

Query: 306 SASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQKR------ISQ-----------D 344
            + +     Q+V    +         L ++     +         ++Q            
Sbjct: 158 LSGWGQPQGQVVPLYGQHWNPGAHRNLELVNVVTGEITTALKVEDVTQQYPDWFSKAYAG 217

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAI---------GVMKKDGSQERLLVEDSNLQAP 395
           KE S F PV SP+ D + F   S               G++  D   +R L ++     P
Sbjct: 218 KEVSIFFPVLSPKLDRVFFKMASASGPDPRSGAASVRQGLICYDLQNQRFLYQNERWGHP 277

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQ 441
           +W P  R ++       +T   ++  D NG+++     P A    P 
Sbjct: 278 SWHPDDRHIV-------ETTFTIFDSD-NGKSQRTPGLPVARGDHPS 316


>gi|149925057|ref|ZP_01913372.1| WD-40 repeat [Plesiocystis pacifica SIR-1]
 gi|149814066|gb|EDM73695.1| WD-40 repeat [Plesiocystis pacifica SIR-1]
          Length = 928

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/259 (16%), Positives = 83/259 (32%), Gaps = 19/259 (7%)

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           RV     DV   +        +   + R  +    D         +G +        + +
Sbjct: 426 RVAISALDVTGERV----ASAAVDGTVRVTSIAAPDQSVSIDGHREGVWALAFTPDGQRL 481

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+     +  V+  DG     +     + +     S + + +A  ++D      V + D 
Sbjct: 482 VTASFDGTARVVRADGRGPARVLRGHREPVLRLALSRSGRWLATGSWDT----DVRVWDL 537

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                   +   R  +      + G+R L +   D +  I+      +    L     +N
Sbjct: 538 ERPDLELPLIGHRGPLQHVEIDAAGERVL-TASSDASARIWDA-RDGSELAVLRGAHALN 595

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           + A +SPD  Q V     +G   L+    N + Q R     E    D  ++P GD +A  
Sbjct: 596 V-AVFSPDG-QFVATGHNDGLMTLW----NTATQARRDHKHELGVMDLAFAPAGDRLASA 649

Query: 365 KFSGEKFAIGVMKKDGSQE 383
              G    + V   D  + 
Sbjct: 650 CSDGS---VWVWATDTGER 665



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 72/234 (30%), Gaps = 58/234 (24%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           Q+  +      D   V   D    R  +   +  +  + P F  + + A+ ++       
Sbjct: 380 QRDVFHARFVGDDWVVTGSDDGTVRGWELGTDVPAPKIEPSFEVDHRVAISALDVTGER- 438

Query: 284 IYSVDLQSNATERLTNTLFINISAS------------YSPDSSQIVFESDREGKEQLYVM 331
                   + T R+T+    + S S            ++PD  ++V  S  +G  +  V+
Sbjct: 439 --VASAAVDGTVRVTSIAAPDQSVSIDGHREGVWALAFTPDGQRLVTASF-DGTAR--VV 493

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS------------------GEKFAI 373
           +++G    R+ +           S  G  +A   +                   G +  +
Sbjct: 494 RADGRGPARVLRGHREPVLRLALSRSGRWLATGSWDTDVRVWDLERPDLELPLIGHRGPL 553

Query: 374 GVMKKDGSQERLLVEDSNL----------------------QAPTWSPSGRSLI 405
             ++ D + ER+L   S+                           +SP G+ + 
Sbjct: 554 QHVEIDAAGERVLTASSDASARIWDARDGSELAVLRGAHALNVAVFSPDGQFVA 607



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 105/317 (33%), Gaps = 31/317 (9%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++      +   W       +  I  S   +     S +    E V S  +  ++ V   
Sbjct: 394 VVTGSDDGTVRGWELGTDVPAPKIEPSFEVDHRVAISALDVTGERVASAAVDGTVRVTSI 453

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
              +         + ++   F+P+ Q++  A++D     RV   D R     + +   R 
Sbjct: 454 AAPDQSVSIDGHREGVWALAFTPDGQRLVTASFD--GTARVVRADGR--GPARVLRGHRE 509

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            +L    S +G+    +   D  + ++ ++        L                 + V 
Sbjct: 510 PVLRLALSRSGRWLA-TGSWDTDVRVWDLERPDLEL-PLIGHRGPLQHVEIDAAGER-VL 566

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---------- 368
            +  +   +++  + +GS+   +      +    V+SP G  +A     G          
Sbjct: 567 TASSDASARIWDAR-DGSELAVL--RGAHALNVAVFSPDGQFVATGHNDGLMTLWNTATQ 623

Query: 369 ----EKFAIGVMKK--DGSQERLLVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYSI 421
                K  +GVM      + +RL    S+     W+   G  L   R  +G     ++ +
Sbjct: 624 ARRDHKHELGVMDLAFAPAGDRLASACSDGSVWVWATDTGERLAVLRGHEG----VVFQV 679

Query: 422 DLNGRNETLINTPAYAS 438
           + +   E LI+  A A+
Sbjct: 680 EFDAGGERLISASADAT 696



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 63/194 (32%), Gaps = 37/194 (19%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             ++   D  +F   F P+       +      +R + +D       + +    + + + 
Sbjct: 209 HAISSGHDDTIFALAFGPD---DTLYSAAANGEVRRWTLD---GGPGEPLFAHEAAVTSL 262

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
               +G RALIS  +D  + ++         + LT       S +  P +  +   S R+
Sbjct: 263 IMLPDG-RALISASEDGTVRLW--PTGGGEAQVLTRHDAGVTSLALDPSARVLASTS-RD 318

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +L  + S      R++   E           G  +    F            D +  
Sbjct: 319 TTARLIELDS------RLTTVLEG---------HGKAVLAASF------------DDAGA 351

Query: 384 RLLVEDSNLQAPTW 397
           RL+   S+ +A  W
Sbjct: 352 RLVTGSSDNEARVW 365


>gi|282899859|ref|ZP_06307820.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii
            CS-505]
 gi|281195129|gb|EFA70065.1| hypothetical protein CRC_01252 [Cylindrospermopsis raciborskii
            CS-505]
          Length = 9381

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/396 (12%), Positives = 110/396 (27%), Gaps = 77/396 (19%)

Query: 89   QKITNPDSIPRFQDWNSL----GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
            Q       +   +DW  L    G+       +       + V         R  + G+  
Sbjct: 1637 QSAVTGTIVDDDKDWTRLLGTSGSDY--ANGISTGSDGSIYVSG-----VTRGNLDGQTN 1689

Query: 145  FSSPASWRKIAHTISD--DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
                  +  IA    D   ++  + G  G       + S + ++      + +    G N
Sbjct: 1690 SGQMDGF--IAKYNPDGTKVWSQLLGTSG-------YDSVNAITTGSDGYIYISGVTGGN 1740

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI-----------LRVYLMDTRIDRAPK 251
            +   T S    +F  ++SP+  K+        +              +Y+          
Sbjct: 1741 LDGQTNSGSSDIFISKYSPDGTKIWTRLLGTGNSDNANAIATGSDGSIYVSGVTGGNLDG 1800

Query: 252  RIGNFRSMILAPRFSSNGKRA------------LISVQKDEAMDIYSVDLQSNATERLTN 299
            +  + ++     ++S +G +                +      ++Y     +   +  TN
Sbjct: 1801 QTNSGQTDAFISKYSPDGTKIWTQLLGSASKEAAYGLTIGSDGNVYISGTTTGNLDGQTN 1860

Query: 300  TLFINISAS-YSPDSSQIVFES--------DREG-----KEQLYVMQSNGSDQKRISQDK 345
            +   +   S Y+ D S+I +          D  G        +Y+    G +    +   
Sbjct: 1861 SGGTDAFISKYNSDGSKI-WTRLLGSSGYEDASGIVTGEDGSIYITGVTGGNLDGQTNSG 1919

Query: 346  EASYFDPVWSPQGDLIAFTKFSGEKFA------------IGVMKKDGSQERLLVEDSNLQ 393
            +   F   + P G  +       + +             I V    G             
Sbjct: 1920 QTDAFISKYDPDGIKVWTRLLGTDSYEDGNALTIGGDGFIYVSGVTGGNLDGETNSGGSD 1979

Query: 394  AP--TWSPSGRSLI--FSRKKDGDTGSKLYSIDLNG 425
            A    +S  G  +         G+ G+ L +I  +G
Sbjct: 1980 AFISKYSLDGTKIWTKLLGSVSGEGGNGL-NISKDG 2014


>gi|213581846|ref|ZP_03363672.1| translocation protein TolB [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 64

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR-KQIIGKKFFSSPAS 150
                  +   W++LG   ++ G V         V ++L D       ++ +  +     
Sbjct: 2   PATAQEVQPTAWSALGIDAVIVGLVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQ 61

Query: 151 W 151
           W
Sbjct: 62  W 62


>gi|119469874|ref|ZP_01612712.1| putative enzyme [Alteromonadales bacterium TW-7]
 gi|119446857|gb|EAW28129.1| putative enzyme [Alteromonadales bacterium TW-7]
          Length = 682

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 10/94 (10%)

Query: 348 SYFDPVWSPQGDLIAFTKF---------SGEKF-AIGVMKKDGSQERLLVEDSNLQAPTW 397
           S      SP G+ +AFT+          +G  +  + V+  +G +   +    N+++  W
Sbjct: 33  SVIQTSISPDGESVAFTRSLPRKLYVDENGSNYSELYVVDDEGVERPFITGSVNIKSLQW 92

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           S   +++ F  K   D  + LY I ++G     +
Sbjct: 93  SNDSKTIYFLAKLKDDKFTSLYQIPVDGGQAQAV 126



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 64/197 (32%), Gaps = 40/197 (20%)

Query: 264 RFSSNGKRALISVQ----------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             S +G+    +                 ++Y VD +      +T ++ I  S  +S DS
Sbjct: 38  SISPDGESVAFTRSLPRKLYVDENGSNYSELYVVDDEGVERPFITGSVNIK-SLQWSNDS 96

Query: 314 SQIVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             I F +    +    LY +  +G   + +   K  S      SP    +A         
Sbjct: 97  KTIYFLAKLKDDKFTSLYQIPVDGGQAQAVMSLKGTSISSYQLSPDNKQLAL-------- 148

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL- 430
            + +   D S + L       +A               + G    +L+ +DL   ++ L 
Sbjct: 149 -LAMPAADKSDKELKKLGFKAEA--------------YELGLKNKQLFVVDLAKEDKPLS 193

Query: 431 ---INTPAYASDPQWVG 444
              IN  +Y SD  W  
Sbjct: 194 PTAINIDSYVSDVNWSA 210



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 47/276 (17%), Positives = 91/276 (32%), Gaps = 54/276 (19%)

Query: 218 RFSPNQQKVAYATYDDEDIL---------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             SP+ + VA+       +           +Y++D      P   G+    I + ++S++
Sbjct: 38  SISPDGESVAFTRSLPRKLYVDENGSNYSELYVVDDEGVERPFITGSV--NIKSLQWSND 95

Query: 269 GKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASY--SPDSSQIVFE----- 319
            K       ++ D+   +Y + +     + + +    +IS SY  SPD+ Q+        
Sbjct: 96  SKTIYFLAKLKDDKFTSLYQIPVDGGQAQAVMSLKGTSIS-SYQLSPDNKQLALLAMPAA 154

Query: 320 --SDRE---------------GKEQLYVMQSNGSDQKRISQDK---EASYFDPVWSPQGD 359
             SD+E                 +QL+V+     D K +S      ++   D  WS   +
Sbjct: 155 DKSDKELKKLGFKAEAYELGLKNKQLFVVDLAKED-KPLSPTAINIDSYVSDVNWSADSE 213

Query: 360 LI-------AFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIF--SRK 409
            +       A       K    +      +  L  +    L     S  G+ +    +  
Sbjct: 214 KLLVKTQPTALIDDRYTKSMWHLYDIANEKVTLSFKTQGKLGDAELSHDGKYVAILGAED 273

Query: 410 KDGDTGSKLYSIDLNGRNET--LINTPAYASDPQWV 443
           K      +L+  D      T  L N   +  D +W 
Sbjct: 274 KHDPATGRLFIADTETAKITEWLPNFMGHVVDFEWS 309


>gi|190346440|gb|EDK38530.2| hypothetical protein PGUG_02628 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 345

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 76/233 (32%), Gaps = 23/233 (9%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V+D    ++RY+  +  + +   + SP+ + +A  +     ++RVY  +       + +
Sbjct: 18  TVVDSRLYSVRYVVQNPSESINTVKISPDGKTMATCS--SNGVIRVY--ELASGTLKQEL 73

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                 +    FS      L+S   D  + ++S+  +    + L    +   +  +    
Sbjct: 74  RGHAKGVSDVDFSPINSDILVSGSDDLTVRLWSIS-RGKCLKVLRKHTYHVTTVKFISRG 132

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKF 371
           S ++  S     E + V         R              +P   +I    + G    F
Sbjct: 133 SILLSGS---ADETITVWDLTSGKTLRTLSAHSDPISSVALTPDDTIIVSGSYDGLMRLF 189

Query: 372 AI--------GVMKKDGSQERLLVEDSNLQAP-TW---SPSGRSLIFSRKKDG 412
            +         V                +  P ++   SP+G+ ++ S   DG
Sbjct: 190 DLETGYCLKTLVYNSASQGTATASTSDVVNFPISYVNLSPNGKYIL-SSSLDG 241


>gi|77164075|ref|YP_342600.1| hypothetical protein Noc_0550 [Nitrosococcus oceani ATCC 19707]
 gi|254435977|ref|ZP_05049484.1| hypothetical protein NOC27_3040 [Nitrosococcus oceani AFC27]
 gi|76882389|gb|ABA57070.1| hypothetical protein Noc_0550 [Nitrosococcus oceani ATCC 19707]
 gi|207089088|gb|EDZ66360.1| hypothetical protein NOC27_3040 [Nitrosococcus oceani AFC27]
          Length = 766

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 67/173 (38%), Gaps = 44/173 (25%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKD----------------EAMDIYSVDLQSNATER 296
           +G    +++ PR S +GK+   +V +                 +   ++ V+L++    +
Sbjct: 131 LGENTCIVIDPRVSFDGKQVAYTVLEGRYGTNPDVKMQHGIDAQKSSLHFVNLETMEKTQ 190

Query: 297 LTNTLFI-NISASYSPDSSQIVFESDREGKE--------------QLYVMQSNGSDQKRI 341
                 + +++  + PD + + F S+R+  +              QL+V   NGS  + +
Sbjct: 191 WAAVQGVFDMAPQWLPDGTLM-FTSNRDHIKAGSISGFSPEGEVLQLWVADRNGSHARNV 249

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFS-----------GEKFAIGVMKKDGSQE 383
           S D  A    P+  P G  + F+ +               + I   ++DGS+ 
Sbjct: 250 SPDILADALHPILHPSGK-VLFSSWKRDLESVQNKTLDNLWYIAETRQDGSEH 301


>gi|291389247|ref|XP_002711061.1| PREDICTED: achalasia, adrenocortical insufficiency, alacrimia
           (Allgrove, triple-A) [Oryctolagus cuniculus]
          Length = 546

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 71/198 (35%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  D  D +RVY  ++ I   P      +  + A  +       L    
Sbjct: 158 AWHPHTNKFAVALLD--DSIRVYNANSTI--VPSLKHRLQRNVAALAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIL 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +       +WSP G  +  T  S   F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTYLLWSPDGSKVLATTPS-AVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGNRLLFT 346


>gi|291234115|ref|XP_002736992.1| PREDICTED: WD repeat-containing protein 61-like [Saccoglossus
           kowalevskii]
          Length = 305

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 57/176 (32%), Gaps = 11/176 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S  + + + + D +         +     +   FSP+ + +A  ++  +    + L    
Sbjct: 81  SSSLDSHIRLWDLESGKQLKTMDAGPVDAWTIAFSPDCKYLATGSHTGK----INLFGVE 136

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             R    +       L+  +S +GK    S   D  ++I+  D+ +      L       
Sbjct: 137 SGRKESALDTRGKFTLSIAYSPDGKYIA-SGAIDGIVNIF--DIHTGKLLHTLEGHAMPI 193

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            S  +SPDS  +   SD      + +     ++         +      +SP    
Sbjct: 194 RSLCFSPDSQLLATASD---DGHIKIYDVQHANLAGTLSGHGSWVLSVNFSPDNTH 246



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 76/261 (29%), Gaps = 39/261 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                  L    RLWD++  KQ+  K   + P                        F+  
Sbjct: 77  TIAASSSLDSHIRLWDLESGKQL--KTMDAGPVD-----------------AWTIAFSPD 117

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
             +++    +G     + +   +         +R +      +SP+ + +A    D    
Sbjct: 118 CKYLATGSHTGK----INLFGVESGRKESALDTRGKFTLSIAYSPDGKYIASGAIDG--- 170

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNA 293
             V + D    +    +      I +  FS +  + L +   D  + IY V   +L    
Sbjct: 171 -IVNIFDIHTGKLLHTLEGHAMPIRSLCFSPD-SQLLATASDDGHIKIYDVQHANLAGT- 227

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              L+      +S ++SPD++           + + +  +          D     +   
Sbjct: 228 ---LSGHGSWVLSVNFSPDNTHF---VSSSSDKSVKIWDAGTRQCIATFYDHYDQVWQAK 281

Query: 354 WSPQGDLIAFTKFSGEKFAIG 374
           ++  G  I           I 
Sbjct: 282 YNGNGSKIVSVS-DDRAIHIY 301


>gi|302864745|ref|YP_003833382.1| WD40-like beta Propeller containing protein [Micromonospora
           aurantiaca ATCC 27029]
 gi|302567604|gb|ADL43806.1| WD40-like beta Propeller containing protein [Micromonospora
           aurantiaca ATCC 27029]
          Length = 321

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             S +G+  + +V  D    ++SVD+++    R+          S+SPD  + V+ 
Sbjct: 255 AVSPDGRSVIAAVASDHVGGVWSVDVRTGKKTRI-AGGARAYHPSFSPDGKRFVYV 309



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 1/75 (1%)

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            + GS   R   +      D   SP G  +     S     +  +     ++  +   + 
Sbjct: 235 WAVGSATARFITELPG-LADLAVSPDGRSVIAAVASDHVGGVWSVDVRTGKKTRIAGGAR 293

Query: 392 LQAPTWSPSGRSLIF 406
              P++SP G+  ++
Sbjct: 294 AYHPSFSPDGKRFVY 308



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 15/102 (14%), Positives = 32/102 (31%), Gaps = 13/102 (12%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +          D    +    + S     +T    +    + SPD   ++     
Sbjct: 221 PEVSPD----------DLTWHLTEWAVGSATARFITELPGL-ADLAVSPDGRSVIAAVAS 269

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +    ++ +      + RI+    A  + P +SP G    + 
Sbjct: 270 DHVGGVWSVDVRTGKKTRIA--GGARAYHPSFSPDGKRFVYV 309



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  + +       +  R + E   L     SP GRS+I       D    ++S+D+
Sbjct: 223 VSPDDLTWHLTEWAVGSATARFITELPGLADLAVSPDGRSVI--AAVASDHVGGVWSVDV 280

Query: 424 NGRNETLINTPAYASDPQWVG 444
               +T I   A A  P +  
Sbjct: 281 RTGKKTRIAGGARAYHPSFSP 301


>gi|163755594|ref|ZP_02162713.1| probable dipeptidyl anminopeptidase [Kordia algicida OT-1]
 gi|161324507|gb|EDP95837.1| probable dipeptidyl anminopeptidase [Kordia algicida OT-1]
          Length = 641

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP G+ I+F     ++  I V K D  +   +   ED +L    W+   R L++ R K G
Sbjct: 52  SPNGEYISFLAPYKDRMNIHVRKFDSDEVTRVTSVEDRDLSGYFWANDDR-LVYIRDKGG 110

Query: 413 DTGSKLYSIDLNGRNET 429
           +    L++++ +G NE 
Sbjct: 111 NENFHLFAVNKDGTNEK 127



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 60/153 (39%), Gaps = 7/153 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R S NG+         + M+I+     S+   R+T+    ++S  +  +  ++V+  D+ 
Sbjct: 50  RLSPNGEYISFLAPYKDRMNIHVRKFDSDEVTRVTSVEDRDLSGYFWANDDRLVYIRDKG 109

Query: 324 GKE--QLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGD--LIAFTKFSGEKFAIGVMKK 378
           G E   L+ +  +G+++K ++  D   +          D  +I   K   + F    +  
Sbjct: 110 GNENFHLFAVNKDGTNEKDLTPFDGVRAQIIDALQDNEDELIIELNKRIPQVFDPYRLNI 169

Query: 379 DGSQERLLVE-DSNLQAPTWSPSGR-SLIFSRK 409
           +  +  LL E   N+        G+  L +   
Sbjct: 170 NTGELELLYENPGNITGWQTDHDGKLRLAYVTN 202


>gi|159470387|ref|XP_001693341.1| intraflagellar transport particle protein 80 [Chlamydomonas
           reinhardtii]
 gi|158277599|gb|EDP03367.1| intraflagellar transport particle protein 80 [Chlamydomonas
           reinhardtii]
          Length = 747

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/191 (19%), Positives = 70/191 (36%), Gaps = 20/191 (10%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           +R  R  K I   +   ++ R+S +G     +  +D ++ I+S +        L      
Sbjct: 91  SRTGRVEKSIEGHKGACISLRWSYDGTALA-TAGEDGSVKIWSRN--GMLRSTLAQADSP 147

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S  ++ D  Q+ + +       + +   + + ++   +  +       WSP   LI  
Sbjct: 148 VYSIVWAYDCDQLCYCT----GSNVVIKSLSSNAKQNAWKAHDGVVLKVDWSPINHLII- 202

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLY 419
               GE     V    G   RLL +      P     W+PSG   +F+     DTGS + 
Sbjct: 203 --TGGEDCKYKVWDSFG---RLLFQSGLFDYPVTSVAWAPSGE--LFAEIHLNDTGS-IM 254

Query: 420 SIDLNGRNETL 430
           ++     +  L
Sbjct: 255 TLSWTADSTQL 265


>gi|145511992|ref|XP_001441918.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409179|emb|CAK74521.1| unnamed protein product [Paramecium tetraurelia]
          Length = 3830

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 80/213 (37%), Gaps = 24/213 (11%)

Query: 165  SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
             +        S+I+ +S+S   G    S  V+  D  N + +      I       PN++
Sbjct: 2802 KLMNLNWMLQSQIVSISQSNEKGDNNYS-FVISSD--NSQIICGYSSWIKSY-SLDPNEK 2857

Query: 225  K---------------VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            +               +   T       ++YL++   +  P  +G+    +++ R+S   
Sbjct: 2858 QNIDLSAPGKINCLVQIELNTVSIGCDNKIYLINVNQNEKPLPLGDHNDNVISLRYSYT- 2916

Query: 270  KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
               L S  KDE + +++V+ +      L          S+SPD   +   SD    +Q+ 
Sbjct: 2917 TSLLASGSKDEKIFLWNVNAK-KKIAVLEGHRGWINQLSFSPDGQCLASASD---DQQIK 2972

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +     S+Q  +S+  +       +S  G +IA
Sbjct: 2973 LWNIEQSEQSNVSKGHQQCVNQVAFSKDGLIIA 3005



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 59/199 (29%), Gaps = 15/199 (7%)

Query: 176  RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            R  + +  + SG     + + + +      +       + +  FSP+ Q +A A+ D   
Sbjct: 2912 RYSYTTSLLASGSKDEKIFLWNVNAKKKIAVLEGHRGWINQLSFSPDGQCLASASDDQ-- 2969

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-T 294
              ++ L +             +  +    FS +G   LI         I   DL      
Sbjct: 2970 --QIKLWNIEQSEQSNVSKGHQQCVNQVAFSKDG---LIIASCSGDCSIILWDLLEKNFI 3024

Query: 295  ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-- 352
              L           +S  S  +   S  +G   + +       +  +       Y  P  
Sbjct: 3025 IMLKEHTAYVSCLEFSFCSKWLASGSY-DGS--ICLWDVKFPQETTLFYKINELYLFPDF 3081

Query: 353  -VWSPQGDLIAFTKFSGEK 370
              +SP G   A     G K
Sbjct: 3082 LRFSPSGCF-ATISNDGGK 3099


>gi|118399913|ref|XP_001032280.1| conserved hypothetical protein [Tetrahymena thermophila]
 gi|89286620|gb|EAR84617.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
          Length = 2254

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 80/204 (39%), Gaps = 10/204 (4%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSPN Q +A  + D     +++ ++ +  +  K +      + +  FSS+ K    +   
Sbjct: 1629 FSPNGQYIATGSTDT--TCKIWKINNQGFKLFKNLEGHSGEVSSIAFSSDSKYLA-TSSY 1685

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D+   I+ ++ Q      +          ++S D+  +   S  +   +++  Q +    
Sbjct: 1686 DKTAKIWDLERQFLLIHTIQGHSREITQLAFSKDNKYLATVSY-DKTCRIWSCQKDFQQI 1744

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-W 397
            K I QD         +S     +A   +  +   I  +++D S    L + +++ A   +
Sbjct: 1745 KAI-QDYTREVTTVAFSEDSKYLATGSYE-KTCKIFDIERDFSLLITLQDHTSIIAQVKF 1802

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSI 421
            S  GR L        D   K++S+
Sbjct: 1803 SKDGRYLATCSY---DNTCKIWSV 1823



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 60/176 (34%), Gaps = 9/176 (5%)

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASY 309
            + I      I +  FS NG+    +   D    I+ ++ Q     + L        S ++
Sbjct: 1615 QVIECHGKKISSVVFSPNGQYIA-TGSTDTTCKIWKINNQGFKLFKNLEGHSGEVSSIAF 1673

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            S DS  +   S  +   +++ ++        I Q          +S     +A   +  +
Sbjct: 1674 SSDSKYLA-TSSYDKTAKIWDLERQFLLIHTI-QGHSREITQLAFSKDNKYLATVSYD-K 1730

Query: 370  KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               I   +KD  Q + + +    +    +S   + L        +   K++ I+ +
Sbjct: 1731 TCRIWSCQKDFQQIKAIQDYTREVTTVAFSEDSKYLATGSY---EKTCKIFDIERD 1783



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 69/198 (34%), Gaps = 26/198 (13%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FS + + +A ++ D     +++ ++ R +   K I +   MI    FS++ K    +  
Sbjct: 1929 AFSNDCKYLATSSLD--QTCKIWNIENRFELQ-KVIQDHTDMITCVAFSNDNKYLA-TSS 1984

Query: 278  KDEAMDIYSVDLQSNATE-RLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSN- 334
             D+   I+  D Q    +  +           ++SPD   +       G    Y    + 
Sbjct: 1985 FDQTCRIW--DTQKGFVQANIIQGETEYVYFVAFSPDCKHLA-----IGYMDYYCQVLDI 2037

Query: 335  --GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--- 389
              G   K   +D+  +     +S  G   + T        I     D +    LV     
Sbjct: 2038 QEGFKLKYTLEDEAYNVASMSFSDDGKYFS-TGSEDNTCKIW----DSNNNFNLVHTIKG 2092

Query: 390  --SNLQAPTWSPSGRSLI 405
              S + +  +SP  R L+
Sbjct: 2093 HESFVNSVCFSPDSRYLV 2110


>gi|291400546|ref|XP_002716674.1| PREDICTED: WD repeat domain 5B-like [Oryctolagus cuniculus]
          Length = 329

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 82/222 (36%), Gaps = 20/222 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                  Q +   +FSPN + +A ++ D     R+ +      +  K +   R  I    
Sbjct: 34  STLAGHTQAVSSVKFSPNGEWLASSSADK----RIIIWGAYDGKLEKTLYGHRLEISDVA 89

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDRE 323
           +SS+  R + S   D+ + I+  D+ S      L          +++P S+ IV  S   
Sbjct: 90  WSSDSSRLV-SASDDKTLKIW--DVSSGKCWRTLKGHNNYVFCCNFNPASNLIVSGSF-- 144

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ- 382
             E + + +       +             ++  G LI    + G      +      Q 
Sbjct: 145 -DESVKIWEVKTGKCLKTLCAHSDPVSAVHFNCSGSLIVSGSYDG---LCRIWDAASGQC 200

Query: 383 ERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            ++LV+D N  +   T+SP+G+ ++ +     D   KL+   
Sbjct: 201 LKVLVDDVNPPVSFVTFSPNGKYILTATL---DNSLKLWDYS 239



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 60/172 (34%), Gaps = 9/172 (5%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG   + L   R +I     +S +  ++  A+ D      + + D    +  + +    
Sbjct: 70  YDGKLEKTLYGHRLEISDV-AWSSDSSRLVSASDDK----TLKIWDVSSGKCWRTLKGHN 124

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           + +    F+      ++S   DE++ I+ V       + L        +  ++   S IV
Sbjct: 125 NYVFCCNFNP-ASNLIVSGSFDESVKIWEV-KTGKCLKTLCAHSDPVSAVHFNCSGSLIV 182

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             S  +G  +++   ++G   K +  D         +SP G  I        
Sbjct: 183 SGSY-DGLCRIWDA-ASGQCLKVLVDDVNPPVSFVTFSPNGKYILTATLDNS 232


>gi|254426227|ref|ZP_05039944.1| X-Pro dipeptidyl-peptidase (S15 family) [Synechococcus sp. PCC
           7335]
 gi|196188650|gb|EDX83615.1| X-Pro dipeptidyl-peptidase (S15 family) [Synechococcus sp. PCC
           7335]
          Length = 686

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/237 (14%), Positives = 77/237 (32%), Gaps = 25/237 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +  S   I   P F+P    + +          +    T      + +      I   R 
Sbjct: 11  MLASASMITLGPIFNP----LPFVPMSVATAEDLTNQSTLPPLIERELFFSDPEISGARL 66

Query: 266 SSNGKRALISVQKDEAMDIYS--VDLQSNATERLTNTLFINISA----SYSPDSSQIVFE 319
           S NG+        D  ++++   +D   +A   +T       S      +S D   I++ 
Sbjct: 67  SPNGQFVAFRKPLDGIVNVWVKGIDEPMDAARPVT---ADVESPIMIYFWSADGRYILYG 123

Query: 320 SDREGKEQLY-------VMQSNGSDQKRISQDKEAS---YFDPVWSPQGDLIAFTKFSGE 369
            D  G E          V+   G   + ++  +  +   Y  P  +P   +I        
Sbjct: 124 QDTGGNENFRLYAVEPEVVGEAGVGARDLTPIENVTATVYAIPKETPNQIVIGLNDRDPR 183

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-SLIFSRKKDGDTGSKLYSIDLNG 425
              +  +        LL+++ +     W+   +  +  + ++  + G ++  ++ NG
Sbjct: 184 VHDVYRLDLTTGDRTLLIQN-DGTVAAWAADHKGDIRLAYRQSLENGQEILKVEENG 239



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 57/153 (37%), Gaps = 21/153 (13%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAF 363
            A  SP+   + F    +G   ++V   +      + ++ D E+      WS  G  I +
Sbjct: 63  GARLSPNGQFVAFRKPLDGIVNVWVKGIDEPMDAARPVTADVESPIMIYFWSADGRYILY 122

Query: 364 TKFSGE--KFAIGVMKKD-----GSQERLLVEDSNLQAPTWS-----PSGRSLIFSRKKD 411
            + +G    F +  ++ +     G   R L    N+ A  ++     P+   ++      
Sbjct: 123 GQDTGGNENFRLYAVEPEVVGEAGVGARDLTPIENVTATVYAIPKETPN--QIVIGLNDR 180

Query: 412 GDTGSKLYSIDLNGRNETLI-----NTPAYASD 439
                 +Y +DL   + TL+        A+A+D
Sbjct: 181 DPRVHDVYRLDLTTGDRTLLIQNDGTVAAWAAD 213


>gi|116624122|ref|YP_826278.1| WD-40 repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227284|gb|ABJ85993.1| WD-40 repeat protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 464

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 79/245 (32%), Gaps = 35/245 (14%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + + D    +        + + +  RFS +   +  A      + +  L D R  
Sbjct: 177 AGHERVYLYDLAKHSPAGELAFPEGVPYVLRFSRDGATLLAAGGRGVQLGKAALFDVRTG 236

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +    +G  R ++LA   +++GK   +     + + +Y+V +       +        + 
Sbjct: 237 KRIATMGEERDIVLAADVTADGKLVALGG-PGKTVKVYAV-VDGKLKYEIKKHTDWITAL 294

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD S +    DR G   +Y+ ++          D + S     W   G L+A     
Sbjct: 295 EFSPDGSHLA-TGDRSGA--IYLWEAATGGTVGALADHKDSITSLSWRGDGALLASGSED 351

Query: 368 G--------EKFAIGVMKKD----------------------GSQERLLVEDSNLQAPTW 397
           G        + F +  M K                        S+ R++    +     W
Sbjct: 352 GQIIVWNVSDGFPVATMAKAHLPKAAPGQYGTIPGGVLSVQFTSEGRIVSVGRDSTIRAW 411

Query: 398 SPSGR 402
           S  G+
Sbjct: 412 SADGK 416


>gi|330953410|gb|EGH53670.1| hypothetical protein PSYCIT7_18946 [Pseudomonas syringae Cit 7]
          Length = 377

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 70/186 (37%), Gaps = 26/186 (13%)

Query: 260 ILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              PR   FSS+GK   +  +    +  ++++ ++ A ++ +    I    + +P  ++ 
Sbjct: 199 NTGPRHLTFSSDGKFLYVVGEMSGTVTAFAINQKTGALKQTSQADGIPKRLNLAPGQARD 258

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              +D +      +  ++                    +P G  +  ++ +    ++  +
Sbjct: 259 ARNNDLKDDPTPRIWAAD-----------------IRLAPNGKWLFISERTSSSVSVFNV 301

Query: 377 KKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                +   +    V++   +    SP+GR L+ S +K    GS  Y+ID  G  + +  
Sbjct: 302 DPTSGKVTFVENYPVQEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIDEKGALQRIGE 359

Query: 433 TPAYAS 438
            P+   
Sbjct: 360 APSGKG 365


>gi|296211814|ref|XP_002752568.1| PREDICTED: aladin isoform 1 [Callithrix jacchus]
          Length = 546

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 68/198 (34%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  DD     V + +      P      +  + A  +       L    
Sbjct: 158 AWHPHTNKFAVALLDD----SVRVYNASSTIVPSLKHRLQRNVAALAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQMLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIR 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  +  T  S   F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVLATTPS-AVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGNRLLFT 346



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 38/339 (11%), Positives = 98/339 (28%), Gaps = 51/339 (15%)

Query: 135 DRKQIIGKKFFSSPASWR------KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           + + + G  + S P  +R       I H   D +    T  + D  +R  F+        
Sbjct: 22  NNELVTGSSYESPPPDFRGQWINLPILHLAKDPL---KTPGRLDHGTRTAFIHHREQVWK 78

Query: 189 IKNSLC-----------VMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATYDDED 235
              ++            + + +     ++  +    L   R+  S +     + +   ED
Sbjct: 79  RCINIWRDVGLFGVLNEIANSEEEVFEWVKTASGWALALCRWASSLHGSLFPHLSLRSED 138

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           ++  +   T       R+           +  +  +  +++  D    +   +  S    
Sbjct: 139 LIAEFAQVTNWSSCCLRVF---------AWHPHTNKFAVALLDD---SVRVYNASSTIVP 186

Query: 296 RLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQS-------NGSDQKRISQDKEA 347
            L + L  N++A ++ P S+ ++  + +     ++ +         +    + +S     
Sbjct: 187 SLKHRLQRNVAALAWKPLSASVLAVACQS-CILIWTLDPTSLSTRPSSGCAQMLSHPGHT 245

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                 W+P G  +           +  +  +            +    WSP G  ++  
Sbjct: 246 PVTSLAWAPSGGRLLSASPVDAAIRVWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVL-- 303

Query: 408 RKKDGDTGSKLYSIDLNGRN--ETLINTPAYASDPQWVG 444
                 T S ++ +        E             W  
Sbjct: 304 ----ATTPSAVFRVWEAQMWTCERWPTLSGRCQTGCWSP 338


>gi|167763931|ref|ZP_02436058.1| hypothetical protein BACSTE_02313 [Bacteroides stercoris ATCC
           43183]
 gi|167698047|gb|EDS14626.1| hypothetical protein BACSTE_02313 [Bacteroides stercoris ATCC
           43183]
          Length = 730

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 63/156 (40%), Gaps = 17/156 (10%)

Query: 264 RFSSNGKRA-LISVQKDEA-MDIYSVDLQSNATERLTNTLFINISASYSP---------- 311
            ++ +GK   LI + +D+    +   + ++     L +TL       Y            
Sbjct: 287 SWAPDGKSLYLIELNRDQNHAKLCRYNSETGE---LMSTLIEETHPKYVEPQQPILFLTW 343

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGE 369
           D +Q +++S ++G   LY+  ++G   K++++ +        ++ +    +IA T+ S  
Sbjct: 344 DHTQFIYQSQKDGYNHLYLYNTDGKLIKQLTKGEWLVQNILGFNARKKEVIIASTEVSPL 403

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +  +  +  +  +   L     +     S SG  +I
Sbjct: 404 QSNLYKVNVNTGKRTPLDNSKGVHNGILSASGNYII 439


>gi|67922155|ref|ZP_00515670.1| Peptidase S9, prolyl oligopeptidase active site region
           [Crocosphaera watsonii WH 8501]
 gi|67856055|gb|EAM51299.1| Peptidase S9, prolyl oligopeptidase active site region
           [Crocosphaera watsonii WH 8501]
          Length = 645

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/313 (14%), Positives = 109/313 (34%), Gaps = 37/313 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQII--GKKFFSSPASWRKIAHTISDDIYQSITGEK- 170
           G++ +       V  R+ +      ++  G  +F +    R +   + ++  +++T E  
Sbjct: 60  GQITEITPQPFNVRTRVHEYGGGSFLVNDGVVYFVNFQDQR-LYQKLPNEDPKALTPENQ 118

Query: 171 --------GDFNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSP 221
                      N+R++ V E       +    ++  D            D     PR SP
Sbjct: 119 LRYADFVLDVANNRLISVCEDHSHADQECENKIVAIDINTGAITPLIEGDDFYSSPRLSP 178

Query: 222 NQQKVAYATYDDE----DILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRAL 273
           + +++A+ +++      D  +++L +   + + K I    G     I  P++S  G +  
Sbjct: 179 DGKQLAWISWNHPNMPWDGTKLWLGNIESNGSLKDIQCIAGYIDESINEPKWSPGG-QLY 237

Query: 274 ISVQKDEAMDI--YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--------RE 323
               +    ++  Y  +  +     LT          +    S   F S+        ++
Sbjct: 238 YVSDQSGWANLYCYQSNANNAPIFPLTAEFSY---PHWVFGLSTYTFTSEQEILCTYTQD 294

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G+  L  +         +  +   S    + S   +++     + E  ++  +  + SQ 
Sbjct: 295 GRWYLGTLNIPDKQLSIL--ELPYSNIASLRSQDKNVVFLGSSTIEPTSVVYLDLNLSQT 352

Query: 384 RLLVEDSNLQAPT 396
           ++L   SN+   +
Sbjct: 353 KVLKTSSNIDVDS 365



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 42/124 (33%), Gaps = 10/124 (8%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQSNGSD 337
            I ++D+ + A   L        S   SPD  Q+ + S           +L++     + 
Sbjct: 150 KIVAIDINTGAITPLIEGDDFYSSPRLSPDGKQLAWISWNHPNMPWDGTKLWLGNIESNG 209

Query: 338 Q----KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                + I+   + S  +P WSP G  + +         +   + + +   +    +   
Sbjct: 210 SLKDIQCIAGYIDESINEPKWSPGGQ-LYYVSDQSGWANLYCYQSNANNAPIFPLTAEFS 268

Query: 394 APTW 397
            P W
Sbjct: 269 YPHW 272


>gi|167384407|ref|XP_001736939.1| hypothetical protein [Entamoeba dispar SAW760]
 gi|165900519|gb|EDR26827.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
          Length = 825

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 77/230 (33%), Gaps = 33/230 (14%)

Query: 218 RFSPNQQKVA----------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI---LAPR 264
           RFSP+   +A          + +   +D                 IGN R  +       
Sbjct: 70  RFSPDGTILAVGNDDKIVSLWKSEGMKDEFERDKEGNVYCEEYLNIGNLRGHVQEITDIS 129

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
           +S +GK    S   D  + I+  D+     + +      ++   ++ P +  IV      
Sbjct: 130 WSPDGKFLA-SSSADNTVTIW--DITKMELKDVFRGHNSSVFGVAWDPINEYIV----SM 182

Query: 324 GKEQLYVMQSNG-SDQKRI-----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-VM 376
             +++ +       +  RI     + +         WSP G  I       +K  +  ++
Sbjct: 183 DFQKVVIWDIKTLEEIARIEDVYKTANHGNFSSRISWSPDGMDIVVGSAVSKKRHVALLI 242

Query: 377 KKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           K+D    +LL    N    + +SP     I++  K+G      + I   G
Sbjct: 243 KRDKWAVQLLTAHLNEVICSRFSPE----IYTYTKEGGKKKSAFCIFATG 288



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 74/221 (33%), Gaps = 30/221 (13%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                Q + +  +SP+ + +A ++ D+     V + D              S +    + 
Sbjct: 118 LRGHVQEITDISWSPDGKFLASSSADN----TVTIWDITKMELKDVFRGHNSSVFGVAWD 173

Query: 267 SNGKRAL-ISVQKDEAMDIYSVDLQSNATERL------TNTLFINISASYSPDSSQIVFE 319
              +  + +  QK    DI +++       R+       N    +   S+SPD   IV  
Sbjct: 174 PINEYIVSMDFQKVVIWDIKTLE----EIARIEDVYKTANHGNFSSRISWSPDGMDIVVG 229

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ---------GDLIAFTKFSGEK 370
           S    K  + ++        ++            +SP+             AF  F+   
Sbjct: 230 SAVSKKRHVALLIKRDKWAVQLLTAHLNEVICSRFSPEIYTYTKEGGKKKSAFCIFATGG 289

Query: 371 FA----IGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
                 I   KKD     L+ +  D+++Q   W+  G+ ++
Sbjct: 290 MGGDCCIWENKKDIDSICLVTDVFDNSIQDIAWANHGKMIL 330


>gi|37521039|ref|NP_924416.1| peptidase [Gloeobacter violaceus PCC 7421]
 gi|35212035|dbj|BAC89411.1| gll1470 [Gloeobacter violaceus PCC 7421]
          Length = 638

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 79/232 (34%), Gaps = 24/232 (10%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            ++ V E      + N+L  ++ D  N   L    D     PRFSP    +A+ +++  +
Sbjct: 130 YLICVREEHREDEVINALVRIELD--NATVLVSGADFYA-SPRFSPGGNCLAWLSWNHPN 186

Query: 236 ILRV--------YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +            L D  + +     G  +  I  P +S  G        +    ++Y+ 
Sbjct: 187 MPWDGTELWVAEVLADGGVGQPMLVAGGAQESIFQPEWSPGGT-LHFISDRSGWWNLYA- 244

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--------GKEQLYVMQSNGSDQK 339
             + N  + L           +    S   F S+R+        G  +L V+  + +  +
Sbjct: 245 -WEDNEVQALYPREAEFGLPQWVFGMSTYAFISERQILCTYRENGLTRLGVLDKHSTAFR 303

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            I +        P   P G ++     +     I +   +  + R+L   S+
Sbjct: 304 TI-ELPYTELSGPAIVPGGAVLVAASPTQSAAVIKL-DLESGEHRVLRTSSH 353



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 53/365 (14%), Positives = 108/365 (29%), Gaps = 44/365 (12%)

Query: 100 FQDWNS-LGAQVLVTGR-----VIKEGKDRLRVEFRLWDVKDRKQIIGK-KFFSSPASWR 152
           +  W S + A ++V+G      V  +G D   +E R    +  + ++ +     +     
Sbjct: 9   YGSWKSPITADLIVSGTIGLGMVRADGSDVYWLESR--PTEGGRTVLVRMGARGAIEDIS 66

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
                +   +++   G     +  + FV+    S  +   L          + +      
Sbjct: 67  PSGSNVRSRVHEYGGGAYAVKDGVVYFVNF---SDQVLYRLE------QAEQSVAMVSGS 117

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
              +    P Q+ +     +  +   +  +          + +      +PRFS  G   
Sbjct: 118 SYADLAIDPRQRYLICVREEHREDEVINALVRIELDNATVLVSGADFYASPRFSPGGNCL 177

Query: 273 LISVQKDEA-------MDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESDR 322
                           + +  V       + +        S     +SP    + F SDR
Sbjct: 178 AWLSWNHPNMPWDGTELWVAEVLADGGVGQPMLVAGGAQESIFQPEWSP-GGTLHFISDR 236

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--------FSGEKFAIG 374
            G   LY  + N   + +    +EA +  P W       AF                 +G
Sbjct: 237 SGWWNLYAWEDN---EVQALYPREAEFGLPQWVFGMSTYAFISERQILCTYRENGLTRLG 293

Query: 375 VMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           V+ K  +  R +       + P   P G  L+ +         KL   DL      ++ T
Sbjct: 294 VLDKHSTAFRTIELPYTELSGPAIVPGGAVLVAASPTQSAAVIKL---DLESGEHRVLRT 350

Query: 434 PAYAS 438
            ++  
Sbjct: 351 SSHLP 355


>gi|293369386|ref|ZP_06615971.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           ovatus SD CMC 3f]
 gi|292635553|gb|EFF54060.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           ovatus SD CMC 3f]
          Length = 736

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 69/198 (34%), Gaps = 42/198 (21%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            NI+ + P  D   +  + + +  ++   ++   + + V            +  NF S  
Sbjct: 38  ENIQRVIPMPDGEHYT-QMNADGTQIIKYSFKTGEKVEVIFDVNTTRECDFK--NFDSYQ 94

Query: 261 LAPRFSSNGKRALIS------VQKDEAMDIYSVDLQ--------SNATERLTNTLFINIS 306
               FS +G++ LI+       +       Y   L+        +N  ERL++       
Sbjct: 95  ----FSPDGQKLLIATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDG-GPQQV 149

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---YFDPVW--------- 354
             +SPD + I F  +        V    G+ + ++++D + +      P W         
Sbjct: 150 PVFSPDGTMIAFVRN---NNIFLVKLLYGNSESQVTEDGKQNSVINGIPDWVYEEEFGFD 206

Query: 355 -----SPQGDLIAFTKFS 367
                S    LIAF +F 
Sbjct: 207 RALEFSADNTLIAFIRFD 224



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 47/161 (29%), Gaps = 33/161 (20%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-------SYFDPVWSPQGDLI- 361
            PD     +        Q+        ++  +  D          ++    +SP G  + 
Sbjct: 46  MPDGEH--YTQMNADGTQIIKYSFKTGEKVEVIFDVNTTRECDFKNFDSYQFSPDGQKLL 103

Query: 362 -------AFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSR 408
                   +         I  +K++            L +    Q P +SP G  + F R
Sbjct: 104 IATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQVPVFSPDGTMIAFVR 163

Query: 409 KKDGDTGSKLY-----SIDLNGRNETLINTPAYASDPQWVG 444
             +      LY      +  +G+  ++IN       P WV 
Sbjct: 164 NNNIFLVKLLYGNSESQVTEDGKQNSVIN-----GIPDWVY 199



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/249 (12%), Positives = 77/249 (30%), Gaps = 54/249 (21%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F         + I     +P  + +  + A      +   +  +++ V   
Sbjct: 26  DLKDITSGRFRP-------ENIQRVIPMPDGEHYTQMNADGTQIIKYSFKTGEKVEV--- 75

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             ++  +    
Sbjct: 76  IFDVNTTRECDFKNFDSYQFSPDGQKLLIATKTTPIYRHSYT-----AVHYIYPLKRNDK 130

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   +A+   ++     ++L+    
Sbjct: 131 GVTTNNIIERLSDGGPQQV-----------PVFSPDGTMIAFVRNNN-----IFLVKLLY 174

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +  ++                          A  FS++          +  +  YS  
Sbjct: 175 GNSESQVTEDGKQNSVINGIPDWVYEEEFGFDRALEFSADNTLIAFIRFDESEVPSYSFP 234

Query: 289 LQSNATERL 297
           + +    R+
Sbjct: 235 VFAGQAPRI 243



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 38/168 (22%)

Query: 219 FSPNQQKVA------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           FSP+ QK+             Y        L+        +   +R+ +     + P FS
Sbjct: 95  FSPDGQKLLIATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQV-PVFS 153

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------------------FINISAS 308
            +G        ++  + +  + L  N+  ++T                       + +  
Sbjct: 154 PDGTMIAFV--RNNNIFLVKL-LYGNSESQVTEDGKQNSVINGIPDWVYEEEFGFDRALE 210

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDP 352
           +S D++ I F    E +   Y          RI        E +Y  P
Sbjct: 211 FSADNTLIAFIRFDESEVPSYSFPVFAGQAPRIDALKDYPGEYTYKYP 258


>gi|182434735|ref|YP_001822454.1| putative serine/threonine protein kinase [Streptomyces griseus
           subsp. griseus NBRC 13350]
 gi|178463251|dbj|BAG17771.1| putative serine/threonine protein kinase [Streptomyces griseus
           subsp. griseus NBRC 13350]
          Length = 710

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 69/200 (34%), Gaps = 18/200 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS----MILAPRFSSNGKRALI 274
           FSP+ + +A    D +  +R++ +  R  RA   +          + A  FS +G+    
Sbjct: 416 FSPDGRTIATGGKDGK--VRLWDVARRKVRATLALRPAPGRTTVSVTAVAFSPDGRLLA- 472

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQ 332
           +        ++ V  +       T     N   S  +SPDS  +   +  +G   L+   
Sbjct: 473 AGTSSSFAALWDVGRRRQVATVTTGDYGANTLDSVEFSPDSRLLA-TASADGA-HLWNAV 530

Query: 333 SNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFT-----KFSGEKFAIGVMKKDGSQERL- 385
                 KRI+    E       +S  G  +A       +  G +  + +      + R  
Sbjct: 531 PGPDLGKRITVLGDEMQTQQVAFSRDGRTLATVGHLTDRNPGSQGVVRLWDVARHKLRKE 590

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
           L         ++SP G ++ 
Sbjct: 591 LYTAEEAYGLSYSPDGETIA 610



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 32/178 (17%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----------SYSPDSS 314
           FS +G+    +  KD  + ++ V     A  ++  TL +  +           ++SPD  
Sbjct: 416 FSPDGRTIA-TGGKDGKVRLWDV-----ARRKVRATLALRPAPGRTTVSVTAVAFSPDGR 469

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-----WSPQGDLIAFTKFSGE 369
            +       G    +    +   +++++      Y         +SP   L+A     G 
Sbjct: 470 LLA-----AGTSSSFAALWDVGRRRQVATVTTGDYGANTLDSVEFSPDSRLLATASADGA 524

Query: 370 KFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFS-----RKKDGDTGSKLYSI 421
                V   D G +  +L ++   Q   +S  GR+L        R        +L+ +
Sbjct: 525 HLWNAVPGPDLGKRITVLGDEMQTQQVAFSRDGRTLATVGHLTDRNPGSQGVVRLWDV 582



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 54/303 (17%), Positives = 107/303 (35%), Gaps = 27/303 (8%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR I  G    +V  RLWDV  RK         +  + R      +  +        G  
Sbjct: 420 GRTIATGGKDGKV--RLWDVARRK-------VRATLALRPAPGRTTVSVTAVAFSPDGRL 470

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +     S + +  + +         G        S +       FSP+ + +A A+ D 
Sbjct: 471 LAAGTSSSFAALWDVGRRRQVATVTTGDYGANTLDSVE-------FSPDSRLLATASADG 523

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL----ISVQKDEAMDIYSV-D 288
             +    +    + +    +G+         FS +G+       ++ +   +  +  + D
Sbjct: 524 AHLWNA-VPGPDLGKRITVLGD-EMQTQQVAFSRDGRTLATVGHLTDRNPGSQGVVRLWD 581

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +  +   +   T       SYSPD   I   + ++ K QL +  S+G     + +     
Sbjct: 582 VARHKLRKELYTAEEAYGLSYSPDGETIA-TAAKDRKVQL-LDASDGRSTGTVDETTVVP 639

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                + P+  L+A   FSGE+  +  + +   + RL+  + N+Q   +SP G  +  + 
Sbjct: 640 VQSVQYGPRDSLLAV--FSGEEVKVWDVAEQKLKHRLVGNNWNVQHLAFSPDGTLVASAS 697

Query: 409 KKD 411
              
Sbjct: 698 SDG 700


>gi|171694147|ref|XP_001911998.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947022|emb|CAP73826.1| unnamed protein product [Podospora anserina S mat+]
          Length = 900

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 97/240 (40%), Gaps = 21/240 (8%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D   I  L  S+++I F    + + + +A+       +L V+   +      K+ G+F 
Sbjct: 285 PDFNQIHTLNISQNEIDFV-TINKSGEWLAFGASKLGQLL-VWEWQSE-SYILKQQGHFD 341

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQI 316
           +M  A  +S +G+R + +   D  + ++  D++S       T       +  ++   + +
Sbjct: 342 AMN-ALVYSPDGQRIV-TTADDGKIKVW--DIESGFCIVTFTEHTSGITACEFAKKGN-V 396

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +F +  +G  + + +     + +  +  +  S+      P G+++A        F I + 
Sbjct: 397 LFTASLDGSIRAWDL-IRYRNFRTFTAPERLSFSCMAVDPSGEVVAAGSID--SFDIHIW 453

Query: 377 KKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                Q   RL   +  + +  ++P+G  L+       D  ++++SI     N T  + P
Sbjct: 454 SVQTGQLLDRLTGHEGPVSSLVFAPNGGLLV---SGSWDKTARIWSI----FNRTQTSEP 506


>gi|115436270|ref|NP_001042893.1| Os01g0322800 [Oryza sativa Japonica Group]
 gi|12328578|dbj|BAB21237.1| putative WD-40 repeat protein [Oryza sativa Japonica Group]
 gi|113532424|dbj|BAF04807.1| Os01g0322800 [Oryza sativa Japonica Group]
 gi|215768245|dbj|BAH00474.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218188101|gb|EEC70528.1| hypothetical protein OsI_01643 [Oryza sativa Indica Group]
 gi|222618315|gb|EEE54447.1| hypothetical protein OsJ_01534 [Oryza sativa Japonica Group]
          Length = 517

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 68/208 (32%), Gaps = 24/208 (11%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-FRSMILAPRFSSN 268
            D  +    FS + + +A  + D +    + +   R  +  +R+       + +  FS +
Sbjct: 267 HDDAVLSVDFSRDSEMLASGSQDGK----IKVWRIRTGQCLRRLERAHAKGVTSVTFSRD 322

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G + L S   D    ++ +       +           A +S D S+++  S       +
Sbjct: 323 GTQIL-SSSFDTTARVHGL-KSGKMLKEFRGHNSYVNCAIFSTDGSRVITASS---DCTV 377

Query: 329 YVMQSNGSD------QKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKFAIGVMKKDGS 381
            V  +  +D           +  +A+      SP   D I     +     I +M   G 
Sbjct: 378 KVWDTKTTDCLQTFKPPPPLRGGDATVNSVHLSPKNSDHIIVCNKTSS---IYIMTLQGQ 434

Query: 382 QERLLV----EDSNLQAPTWSPSGRSLI 405
             +       E  +  A + SP G  + 
Sbjct: 435 VVKSFSSGKREGGDFLAASVSPKGEWIY 462


>gi|332291255|ref|YP_004429864.1| peptidase S9B dipeptidylpeptidase IV domain protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332169341|gb|AEE18596.1| peptidase S9B dipeptidylpeptidase IV domain protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 729

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/304 (13%), Positives = 89/304 (29%), Gaps = 92/304 (30%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVA-------YATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           R LT   D ++ EP FSP+   +A       Y     E   +   +D + +     I ++
Sbjct: 131 RKLTKVSDDLIQEPTFSPDGTMIAYGKGNNLYVFNIAEGTTQQLTIDGKKNSIINGITDW 190

Query: 257 -----RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                   + A  +S++ K+       +  +  +S+D+      +               
Sbjct: 191 VYEEEFGFVRAFDWSADSKKIAYIRFDETDVPEFSMDIYGKELYQ--------------- 235

Query: 312 DSSQIVFESDREG----KEQLYVMQSNGSDQK-----RISQDKEASYFDP--VWSPQGDL 360
             +Q VF+  + G    K  L +   +  + +      I+    A Y+ P   WS   ++
Sbjct: 236 --TQSVFKYPKAGEANAKVTLRLHNLDSGNSRKAKDVEINLGDNAGYYIPRISWSKDPNV 293

Query: 361 I--------------------------------------------------AFTKFSGEK 370
           +                                                   +T      
Sbjct: 294 LSVQTLNRHQDTLKLSLFNAATYQTKLAVLETDKAYVDVTDNLTFLEDNSFIWTSEKDGW 353

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSG--RSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             +     DG+ +  +          +      + + +   ++G     +Y+I LNG+ +
Sbjct: 354 NHVYHHNADGTLKSQVTSGDWEVTGYYGYDAKTKRIFYQSSENGSINRGVYAIGLNGKKK 413

Query: 429 TLIN 432
             + 
Sbjct: 414 QALA 417



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 25/126 (19%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLI--------AFTKFSG 368
           + R G   +Y   +    +  +S    +    +    +S     +         F + + 
Sbjct: 61  ASRTGSVDIYSYATGDKVRTAVSSADIEGLDYFISYEFSGDEKQVLLATKLQSIFRRSTL 120

Query: 369 EKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NG 425
            +F +       +  R L    D  +Q PT+SP G  + +        G+ LY  ++  G
Sbjct: 121 GEFYVW-----NTLSRKLTKVSDDLIQEPTFSPDGTMIAY------GKGNNLYVFNIAEG 169

Query: 426 RNETLI 431
             + L 
Sbjct: 170 TTQQLT 175


>gi|297155067|gb|ADI04779.1| hypothetical protein SBI_01658 [Streptomyces bingchenggensis BCW-1]
          Length = 429

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/257 (16%), Positives = 85/257 (33%), Gaps = 19/257 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+  + NSL  +D             D       F+P+ +   YA         +   D 
Sbjct: 165 VNNDLGNSLTPIDPATGKAGRPVDVHDPYNLY--FTPDGK---YAVVMASMDRALVFRDA 219

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-MDIYSVDLQSNATERLTNTLFI 303
              R  K +      +    FS +G+  ++S +     + + +  ++    +RL     +
Sbjct: 220 HTMRVVKSVPVSCYGVNHADFSPDGRYFIVSCEFSGELLKVDTARMKVIGQQRLPLGGAM 279

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                 SPD     + +D E  + ++V+  +   + R+    + ++   V S     +  
Sbjct: 280 PQDVKISPDGRT-WYIADME-ADGVWVLNGDAFTRPRLLPTGQGAHGLYV-SRDSRSMYI 336

Query: 364 TKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           T        I V+     +      L    +      S  G+ L  S    G   S++Y+
Sbjct: 337 TNRGEGT--ISVLSFATGKLVERWRLPGGGSPDMGGVSADGKVLWLS----GRYNSEVYA 390

Query: 421 I-DLNGRNETLINTPAY 436
           I   +GR    I     
Sbjct: 391 IATRDGRLLARIPVGGG 407


>gi|21226316|ref|NP_632238.1| hypothetical protein MM_0214 [Methanosarcina mazei Go1]
 gi|20904563|gb|AAM29910.1| hypothetical protein MM_0214 [Methanosarcina mazei Go1]
          Length = 461

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 77/223 (34%), Gaps = 32/223 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  KV Y   DD + + V    T    +   +G+          S +G +  ++ Q
Sbjct: 73  AVSPDGTKV-YVANDDSNNISVIDATTSTVTSTVPVGHAP---YGVAVSPDGTKVYVANQ 128

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSN 334
            D ++ +    + +  +  + +   ++ S S    SPD +++   +   G     V+ ++
Sbjct: 129 NDSSVSV----INTTTSTVIASVP-VDYSPSGVVVSPDGTKVYVANY--GSNTTSVIDTS 181

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                       A Y     SP G  +    +              S       +     
Sbjct: 182 NYSITFTVPVGIAPYGV-AISPDGTKVYVANYGSN---------TTSVIDTATNNVIASV 231

Query: 395 PT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           P  WSP G ++          G+K+Y  +L   N ++I+T   
Sbjct: 232 PVGWSPVGVTIA-------PDGTKVYVANLGSSNVSIIDTATN 267


>gi|283779382|ref|YP_003370137.1| WD-40 repeat-containing protein [Pirellula staleyi DSM 6068]
 gi|283437835|gb|ADB16277.1| WD-40 repeat protein [Pirellula staleyi DSM 6068]
          Length = 355

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 61/181 (33%), Gaps = 16/181 (8%)

Query: 242 MDTRIDRAPKRIGNFRSMILAP-------RFSSNGKRALISVQKDEAMDIYSVDLQ-SNA 293
           MD       K +     + + P       RFS +G    I+   D  +  + V  + +  
Sbjct: 1   MDITTADLVKSLEPQLGLSITPEVQLTVARFSPDGNTL-IATSFDAKIRRWDVSTEEAKE 59

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDP 352
              LT     + + ++  + + + F +D  GK   + + +     +  +    +    D 
Sbjct: 60  LAPLTGHSGWSTAIAFRAEGNWL-FTADSWGKIAAWDLLTTEDKPRWTLDTAHDGWVRDL 118

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKK 410
             S  G  +      G    + V + +  +          +L    ++P G+S+I    +
Sbjct: 119 AVSSDGKTLVSC---GSDAKVCVAELETGKLVTSFTAGGRDLFCIRFAPDGQSIIVGDDR 175

Query: 411 D 411
            
Sbjct: 176 G 176



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/161 (13%), Positives = 47/161 (29%), Gaps = 10/161 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           RFSP+   +   ++D +  +R + + T   +    +        A  F + G     +  
Sbjct: 30  RFSPDGNTLIATSFDAK--IRRWDVSTEEAKELAPLTGHSGWSTAIAFRAEGNWL-FTAD 86

Query: 278 KDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               +  + + L +    R    T         + S D   +V         ++ V +  
Sbjct: 87  SWGKIAAWDL-LTTEDKPRWTLDTAHDGWVRDLAVSSDGKTLVSC---GSDAKVCVAELE 142

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                          F   ++P G  I      G    + +
Sbjct: 143 TGKLVTSFTAGGRDLFCIRFAPDGQSIIVGDDRGIARRVAL 183


>gi|256375599|ref|YP_003099259.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Actinosynnema mirum DSM 43827]
 gi|255919902|gb|ACU35413.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Actinosynnema mirum DSM 43827]
          Length = 680

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 66/215 (30%), Gaps = 26/215 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-----ATYDDEDILRVYLMDTRI 246
            L +   DG   R L         EP F P+   V       +T D+     +  +D   
Sbjct: 249 RLRLTSSDGTQDRVLAQDAGHSYDEPAFLPDASAVIALRSLDSTADEPWENTLVRIDVAT 308

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                 +  F      P  S +G     +        ++ V+L +    R+T T      
Sbjct: 309 GEVTDLLPGFDLSPEHPLVSPDGAVVFFTTFAVGHQVLWRVELATGDVVRMTTTGAYQD- 367

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW--SPQGDLIAFT 364
                          R+GK    +  +  S  + +  D      +PV+  +P G      
Sbjct: 368 -----------VRVSRDGKALYALRNAVDSPARPVRLDPAGVEQEPVYLQAPGG----LD 412

Query: 365 KFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPT 396
              G    I V  +DG   R   +L E  + + P 
Sbjct: 413 SLPGTLTEIEVRVEDGRTVRSYLVLPEGCSPERPA 447



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 8/66 (12%)

Query: 264 RFSSNGKRALIS---VQKDEAMD---IYSVDLQSNAT-ERLTNTLFINISASYSPDSSQI 316
             S +G R +     +  D       ++ VD        RLT +   + S  ++PD S +
Sbjct: 26  AVSPDGSRLVTVVSELSDDGKTWQGSLWEVDPTGGRPARRLTRSAKGDSSPVFTPDGS-L 84

Query: 317 VFESDR 322
           +F S R
Sbjct: 85  LFLSAR 90



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 31/256 (12%), Positives = 74/256 (28%), Gaps = 32/256 (12%)

Query: 218 RFSPNQQKVAYATYDDED-----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             SP+  ++     +  D        ++ +D    R  +R+        +P F+ +G   
Sbjct: 26  AVSPDGSRLVTVVSELSDDGKTWQGSLWEVDPTGGRPARRLTRSAKGDSSPVFTPDGSLL 85

Query: 273 LISVQKDEAMD---------IYSVDLQS---------NATERLTNTLFINISASYSPDSS 314
            +S + D+            ++ +                +R+            SP   
Sbjct: 86  FLSARPDQERKPGEAKDKAALWLLPPSGEARELHRPAGGVDRVLVAGGSGTVLLGSPVHR 145

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              F    E    +   + +      + +     Y+D    P    +  T    +  +  
Sbjct: 146 GAGFG---EADADVRKAREDAGVTAILHESYPIRYWDHDLGPFHSRLLATTAPVDGDSAR 202

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS----KLYSIDLNGRNETL 430
           +   D      + E +   +   S  GR +  +     D       +L     +G  + +
Sbjct: 203 LGAGDLVDLTPVTERARFASVAISDDGRWVAHTESVAVDAAYGNHVRLRLTSSDGTQDRV 262

Query: 431 INTPAYAS--DPQWVG 444
           +   A  S  +P ++ 
Sbjct: 263 LAQDAGHSYDEPAFLP 278



 Score = 43.1 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 58/160 (36%), Gaps = 11/160 (6%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            VDL          ++ I+    +   +  +  ++      +L +  S+G+  + ++QD 
Sbjct: 208 LVDLTPVTERARFASVAISDDGRWVAHTESVAVDAAYGNHVRLRLTSSDGTQDRVLAQDA 267

Query: 346 EASYFDPVWSPQGD-LIAFTKFSGEKFAIG-----VMKKDGSQERLLVEDSNL--QAPTW 397
             SY +P + P    +IA                  +     +   L+   +L  + P  
Sbjct: 268 GHSYDEPAFLPDASAVIALRSLDSTADEPWENTLVRIDVATGEVTDLLPGFDLSPEHPLV 327

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAY 436
           SP G  + F+    G     L+ ++L  G    +  T AY
Sbjct: 328 SPDGAVVFFTTFAVGHQ--VLWRVELATGDVVRMTTTGAY 365


>gi|224540419|ref|ZP_03680958.1| hypothetical protein BACCELL_05332 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224517933|gb|EEF87038.1| hypothetical protein BACCELL_05332 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 1330

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 75/167 (44%), Gaps = 22/167 (13%)

Query: 288 DLQSNATERLTNTLFI-NISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRI--SQ 343
           D+++    + TN   + ++   +  D+ +++F   D + + Q++ ++ +G+  K++  + 
Sbjct: 412 DVKTRTIFKPTNGSSVPDLKLHW--DAERLMFSMVDTDRRWQVFEVKLDGTGLKKLIETP 469

Query: 344 DKEASYFDPVWSPQGDLIAFTKFS-------GEKFAIGVM----KKDGSQERLLVEDSNL 392
           +K+  +FD  + P G LIA +               +G M     KDGS  RL  +    
Sbjct: 470 EKDLEFFDATYLPSGKLIAVSNIGYNGVPCVNGNDEVGNMCLYDPKDGSLRRLTFDQDAN 529

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSK----LYSIDLNGRNETLINTPA 435
            APT   +GR ++++R +  D        +  ++ +G  +  +    
Sbjct: 530 WAPTVMNNGR-IMYTRWEYTDLTHYFSRFVMHMNPDGTEQKSLYGSG 575



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 71/237 (29%), Gaps = 37/237 (15%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
             +  +G FN+ I  +S        +            I   T        +  +  + +
Sbjct: 391 QTSAPRGGFNAEIAELSNLRGDVKTRT-----------IFKPTNGSSVPDLKLHW--DAE 437

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQ----- 277
           ++ ++  D +   +V+ +        K I      +      +  +GK   +S       
Sbjct: 438 RLMFSMVDTDRRWQVFEVKLDGTGLKKLIETPEKDLEFFDATYLPSGKLIAVSNIGYNGV 497

Query: 278 -----KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY--- 329
                 DE  ++   D +  +  RLT     N + +   +   +    +       +   
Sbjct: 498 PCVNGNDEVGNMCLYDPKDGSLRRLTFDQDANWAPTVMNNGRIMYTRWEYTDLTHYFSRF 557

Query: 330 --VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              M  +G++QK +      SYF     P     A     G    IGV+       R
Sbjct: 558 VMHMNPDGTEQKSLY--GSGSYF-----PNSTFDAKPLPGGSSQFIGVISGHHGVTR 607


>gi|213649138|ref|ZP_03379191.1| translocation protein TolB [Salmonella enterica subsp. enterica
          serovar Typhi str. J185]
          Length = 60

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 7/60 (11%), Positives = 19/60 (31%), Gaps = 2/60 (3%)

Query: 13 MKINLCLLLVLIGGFFPTSIHAFVKVATNSA--NYSPVSIAFTKFVSIDELGGKVSEVVS 70
          M      +       +   +HA V++       +  P+ +   K+         +  +V+
Sbjct: 1  MMKQALRVAFGFLMLWAAVLHAEVRIEITQGVDSARPIGVVPFKWAGPGAAPEDIGGIVA 60


>gi|326532694|dbj|BAJ89192.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 439

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/162 (13%), Positives = 51/162 (31%), Gaps = 9/162 (5%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D  +     SP+ + +A       D     L+D    +    +        A  ++ +G+
Sbjct: 269 DWAVNHTSLSPDGKIIAVV----GDNPDGVLVDANSGKMIHELSGHLDYSFASAWNPDGR 324

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
               +  +D    I+     S +   L   +    S  Y+ D     F +  E  + +++
Sbjct: 325 TFA-TGNQDRTCRIWDARNLSKSVAVLGGNMGAIRSIHYTSDGK---FLAMAEAADFIHI 380

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                   ++   D         +SP  + + F       ++
Sbjct: 381 FDVGSGYDRKQELDFFGEIAGISFSPDTEAL-FVSVHDRNYS 421



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 70/181 (38%), Gaps = 23/181 (12%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + +I+ V      G+      ++D +   + +         F   ++P+ +   +AT + 
Sbjct: 280 DGKIIAVVGDNPDGV------LVDANSGKMIHELSGHLDYSFASAWNPDGR--TFATGNQ 331

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN- 292
           +   R++     + ++   +G     I +  ++S+GK   ++   D    I+  D+ S  
Sbjct: 332 DRTCRIWDAR-NLSKSVAVLGGNMGAIRSIHYTSDGKFLAMAEAAD---FIHIFDVGSGY 387

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             ++  +        S+SPD ++ +F S         V   N S   + S+ +   Y D 
Sbjct: 388 DRKQELDFFGEIAGISFSPD-TEALFVS---------VHDRNYSSLLQYSRRRFYGYLDS 437

Query: 353 V 353
            
Sbjct: 438 A 438


>gi|209878884|ref|XP_002140883.1| hypothetical protein [Cryptosporidium muris RN66]
 gi|209556489|gb|EEA06534.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
          Length = 513

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/356 (12%), Positives = 106/356 (29%), Gaps = 79/356 (22%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
              + V   L +   +      +  S+ +  R + H ++       T     F      V
Sbjct: 75  DSNIEVSGSLIEAFSK-----LENVSTESVLRIVYHPMAPFRVLPATRCTTSFQGHNGAV 129

Query: 181 --------SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                   S+ + +G   +++   D       +        +    +SP+   +A A  D
Sbjct: 130 LCCAFSPDSKLLATGSGDSTVRFWDLLTETPEFTCKGHSNWVLTVSWSPDGSYLASAGMD 189

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS------------NGKRA----LISV 276
             +++ ++   T     P   G+ +  ++A  +              NG       L+S 
Sbjct: 190 --NLIFIWDPFTGKQSCPILKGHTK-AVVALAWQPLHLVETSKEIQGNGSFIPYSKLVSA 246

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            KD  + I+++ +       LT+ L +     +S   S  ++ S R+    + + +    
Sbjct: 247 SKDTTLKIWNI-INGTIIHTLTSHLQMVTQIKWSGFESGFIYSSSRD--TIIKIWKPETG 303

Query: 337 DQKR-----------ISQDKEASYFDPVWSP----------------------------- 356
              R           ++ + +       + P                             
Sbjct: 304 QLLRDLKGHGHWVNTLALNTDYVTRASCYYPMTKEGVRTDFRCIDEKILMARKIYNSLKQ 363

Query: 357 --QGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSR 408
             + + +         F    M ++G +   RL+     +    +SP GR +  + 
Sbjct: 364 NCKSERLLSGSDDNTLFLWDPMGENGRKPIQRLVGHQKLVNHVVFSPDGRFIASAS 419



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 10/146 (6%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIR---YLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           SE ++SG   N+L + D  G N R          +++    FSP+ + +A A++D     
Sbjct: 367 SERLLSGSDDNTLFLWDPMGENGRKPIQRLVGHQKLVNHVVFSPDGRFIASASFDK---- 422

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + L D    +    +      +    +S +  R L S   D  + ++ +  +    E L
Sbjct: 423 SIRLWDGYSGKFIAVLRGHVGPVYMVCWSVD-SRLLASASGDSTVKVWQIS-KYKLKEDL 480

Query: 298 TNTLFINISASYSPDSSQIVFES-DR 322
                   +  +S D S++   S DR
Sbjct: 481 PGHADEVYAIDWSIDGSRLCSGSKDR 506



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 41/121 (33%), Gaps = 7/121 (5%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
           M     +  +R+   + ++    FS +G+    S   D+++ ++  D  S      L   
Sbjct: 385 MGENGRKPIQRLVGHQKLVNHVVFSPDGRFIA-SASFDKSIRLW--DGYSGKFIAVLRGH 441

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +       +S DS  +   S   G   + V Q +    K          +   WS  G  
Sbjct: 442 VGPVYMVCWSVDSRLLASAS---GDSTVKVWQISKYKLKEDLPGHADEVYAIDWSIDGSR 498

Query: 361 I 361
           +
Sbjct: 499 L 499


>gi|170739193|ref|YP_001767848.1| WD-40 repeat-containing protein [Methylobacterium sp. 4-46]
 gi|168193467|gb|ACA15414.1| WD-40 repeat protein [Methylobacterium sp. 4-46]
          Length = 337

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 69/195 (35%), Gaps = 28/195 (14%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           + +G  A ++   +  +      + +    RL         A+  PD +     S R G 
Sbjct: 45  APDGDAARVAAHPEAGIL-----VAAGDGRRLVTGGDDGRVAATGPDGTTETLASARNGA 99

Query: 326 EQL----------------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                               V+  +   ++R + +   +     ++P+G  +A   ++G 
Sbjct: 100 WIDALALHPDGALAFAAGRRVVARDAKGRER-TTEGPTTVRGLAFAPKGYRLALAHYNGA 158

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              +     D + E L  + S+L   TWSP GR L+ S +++   G   + +  +  +  
Sbjct: 159 T--LWYPNLDAAPEVLAWKGSHLDV-TWSPDGRFLVTSMQENALHG---WRLQPDRGHMR 212

Query: 430 LINTPAYASDPQWVG 444
           +   PA      W  
Sbjct: 213 MSGYPAKVRSVSWSA 227



 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 15/197 (7%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G++  +     R  A           +   G +   +    +  ++      +   D  G
Sbjct: 68  GRRLVTGGDDGRVAATGPDGTTETLASARNGAWIDALALHPDGALAFAAGRRVVARDAKG 127

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              R  T      +    F+P   ++A A Y+        L    +D AP+ +  ++   
Sbjct: 128 ---RERTTEGPTTVRGLAFAPKGYRLALAHYNG-----ATLWYPNLDAAPEVLA-WKGSH 178

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           L   +S +G+  + S+Q++ A+  + +        R++       S S+S D   +    
Sbjct: 179 LDVTWSPDGRFLVTSMQEN-ALHGWRLQPDRGHM-RMSGYPAKVRSVSWSADGHWLA--- 233

Query: 321 DREGKEQLYVMQSNGSD 337
              G E   V   +  +
Sbjct: 234 -TSGAEAAIVWPFDSKE 249


>gi|148656182|ref|YP_001276387.1| peptidase S9 prolyl oligopeptidase [Roseiflexus sp. RS-1]
 gi|148568292|gb|ABQ90437.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Roseiflexus sp. RS-1]
          Length = 644

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/235 (11%), Positives = 77/235 (32%), Gaps = 26/235 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y  +T ++G  N  I    +    G   N++  +  DG   + +  +       PR SP+
Sbjct: 121 YADMTVDRGR-NRLICVREDHSGDGEAVNAIVAVPLDGTTGQQVLVAGSDFYAHPRLSPD 179

Query: 223 QQKVAYATYDDE----DILRVYLMDTRIDRAP----KRIGNFRSMILAPRFSSNGKRALI 274
              +A+ +++      D   +++   R D +P    +  G        P +  +G     
Sbjct: 180 GTWLAWLSWNHPNMPWDAAELWVAPLREDGSPGTAERIAGGPDDAAFQPEWGPDGA-LYF 238

Query: 275 SVQKDEAMDIYS-----------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             ++    ++Y            ++ +      + +     +       + ++V      
Sbjct: 239 VAERTGWWNLYRWHAGNVEALCPMEAEFGLPLWVFSARTYAVE-----SAGRLVCTYIER 293

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           G++++  + +       ++       F    +  G ++     S     + ++  
Sbjct: 294 GEQKMATLDTQSGMLTPLTLPFSDFGFSGPRAANGRVVFIGASSNTPSTLVMLDL 348



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 77/242 (31%), Gaps = 37/242 (15%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-----EAMD 283
            + D E +  +  +        + +         PR S +G               +A +
Sbjct: 140 HSGDGEAVNAIVAVPLDGTTGQQVLVAGSDFYAHPRLSPDGTWLAWLSWNHPNMPWDAAE 199

Query: 284 IYSVDLQS----NATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           ++   L+        ER+            + PD + + F ++R G   LY   +   + 
Sbjct: 200 LWVAPLREDGSPGTAERIAGGPDDAAFQPEWGPDGA-LYFVAERTGWWNLYRWHA--GNV 256

Query: 339 KRISQDKEASYFDPVW--SPQ-------GDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           + +    EA +  P+W  S +       G L+  T     +  +  +         L   
Sbjct: 257 EALCPM-EAEFGLPLWVFSARTYAVESAGRLVC-TYIERGEQKMATLDTQSGMLTPLTLP 314

Query: 388 -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG-------RNETLINTPAYASD 439
             D     P  + +GR +      +  T S L  +DL         R+  +   P Y S 
Sbjct: 315 FSDFGFSGPR-AANGRVVFIGASSN--TPSTLVMLDLASDALMTIRRSMDIQIDPGYIST 371

Query: 440 PQ 441
           PQ
Sbjct: 372 PQ 373



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 75/226 (33%), Gaps = 38/226 (16%)

Query: 254 GNFRSMILAPRFSSNGKRAL-ISVQKDEAMDIYSVDLQSNAT---ERLTNTLFINISAS- 308
           G++RS I A   +++G     +++  D+   +     +        R  N    +++   
Sbjct: 10  GSWRSPITAALVATSGVSLNDVALDGDDIYWLEGRPAEGGRVVIVRRAANGTIADVTPPG 69

Query: 309 --------------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                         Y+ D   + F +  + +      Q  G     ++ +    Y D   
Sbjct: 70  FNVRTRVHEYGGAPYTVDQGVVYFSNFADHR---VYRQQAGETPTPVTPEAPLRYADMTV 126

Query: 355 SPQGDLIAFTKFSGEKF-----AIGVMKKDGS-QERLLVEDSNLQ-APTWSPSGRSLIFS 407
               + +   +           AI  +  DG+  +++LV  S+    P  SP G  L + 
Sbjct: 127 DRGRNRLICVREDHSGDGEAVNAIVAVPLDGTTGQQVLVAGSDFYAHPRLSPDGTWLAWL 186

Query: 408 RKKDGDT---GSKLYSIDLN-----GRNETLINTPAYASD-PQWVG 444
                +     ++L+   L      G  E +   P  A+  P+W  
Sbjct: 187 SWNHPNMPWDAAELWVAPLREDGSPGTAERIAGGPDDAAFQPEWGP 232


>gi|325923355|ref|ZP_08185026.1| hypothetical protein XGA_4062 [Xanthomonas gardneri ATCC 19865]
 gi|325546175|gb|EGD17358.1| hypothetical protein XGA_4062 [Xanthomonas gardneri ATCC 19865]
          Length = 708

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 43/119 (36%), Gaps = 16/119 (13%)

Query: 260 ILAPRFSSNGKRALI-----SVQKDEAMDIYSVD----------LQSNATERLTNTLFIN 304
           I +P  S +G+         SVQ++    ++ V                  R +    + 
Sbjct: 54  IASPTLSPDGRSVAFRTEQASVQRNTYDSVWYVQGLQDAAPRRVADGGVPLRDSAGGALP 113

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               +SPD   + + +  +G   ++   ++GS  + ++ D  A   D      G ++ +
Sbjct: 114 AKVVWSPDGRWLYYRALLDGVIAVWRAAADGSGAQAVTYDA-ADVRDFALDADGRVLRY 171



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 60/151 (39%), Gaps = 19/151 (12%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ------LYVMQSNGSDQKRIS 342
            Q+ + +RL   + I  S + SPD   + F +++   ++       YV     +  +R++
Sbjct: 40  AQTVSPQRLLEVVDI-ASPTLSPDGRSVAFRTEQASVQRNTYDSVWYVQGLQDAAPRRVA 98

Query: 343 QDK--------EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQ 393
                       A     VWSP G  + +        A+     DGS  + +  D ++++
Sbjct: 99  DGGVPLRDSAGGALPAKVVWSPDGRWLYYRALLDGVIAVWRAAADGSGAQAVTYDAADVR 158

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  GR L   R + G T +++ + + +
Sbjct: 159 DFALDADGRVL---RYRVGATRAQVVAAEQD 186



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 37/114 (32%), Gaps = 13/114 (11%)

Query: 214 LFEPRFSPNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR----- 264
           +  P  SP+ + VA+    A+        V+ +    D AP+R+ +    +         
Sbjct: 54  IASPTLSPDGRSVAFRTEQASVQRNTYDSVWYVQGLQDAAPRRVADGGVPLRDSAGGALP 113

Query: 265 ----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               +S +G+        D  + ++      +  + +T         +   D  
Sbjct: 114 AKVVWSPDGRWLYYRALLDGVIAVWRAAADGSGAQAVTYDAADVRDFALDADGR 167



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 31/105 (29%), Gaps = 17/105 (16%)

Query: 351 DPVWSPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVEDS----------NLQA 394
            P  SP G  +AF       + +       V     +  R + +                
Sbjct: 56  SPTLSPDGRSVAFRTEQASVQRNTYDSVWYVQGLQDAAPRRVADGGVPLRDSAGGALPAK 115

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
             WSP GR L +    DG       + D +G  + +    A   D
Sbjct: 116 VVWSPDGRWLYYRALLDGVIAVWRAAADGSGA-QAVTYDAADVRD 159


>gi|294627604|ref|ZP_06706186.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
 gi|292597956|gb|EFF42111.1| secreted protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB
           11122]
          Length = 333

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 52/130 (40%), Gaps = 10/130 (7%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  Q       EG+ Q+ ++       +++   +  +     ++P G  +  +     
Sbjct: 121 SPDGKQFAVCV--EGQNQVMLIDVAQFTVQQVIATRGQAPEHCAYTPDGKWLLTSNEGSN 178

Query: 370 KFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                +++    + R ++    + +   ++P GRS+  ++    +T + +  IDL  R +
Sbjct: 179 DMD--MIELATHRSRGVVATSGHPRGMAFAPDGRSVYIAQ----ETANVVDVIDLQTR-Q 231

Query: 429 TLINTPAYAS 438
              + PA   
Sbjct: 232 RRASLPAGVR 241



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/208 (15%), Positives = 81/208 (38%), Gaps = 15/208 (7%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +N + ++D     ++ +  +R Q      ++P+ + +  +     D+  + L   R   
Sbjct: 133 GQNQVMLIDVAQFTVQQVIATRGQAPEHCAYTPDGKWLLTSNEGSNDMDMIELATHRSRG 192

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
                G+ R M     F+ +G+   I+  ++ A  +  +DLQ+    R +    +  +  
Sbjct: 193 VVATSGHPRGM----AFAPDGRSVYIA--QETANVVDVIDLQTRQ-RRASLPAGVRTAGV 245

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + S D +++ + S+  G   + V+  N +         +  + +P  +P GD +      
Sbjct: 246 ALSADGTRL-YASN-GGAGTVSVIDLNTARALAEIPVGQRPW-NPALTPTGDKLYVANGR 302

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAP 395
               ++     D +  R L +    + P
Sbjct: 303 SNTVSV----IDTASLRELNQIPVGELP 326



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 66/199 (33%), Gaps = 15/199 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ ++ A           V L+D       + I           ++ +GK  L    
Sbjct: 119 ALSPDGKQFAVCVEGQNQ---VMLIDVAQFTVQQVIATRGQAPEHCAYTPDGKWLL--TS 173

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            + + D+  ++L ++ +  +  T       +++PD    V+ +       + V+    + 
Sbjct: 174 NEGSNDMDMIELATHRSRGVVATSGHPRGMAFAPDGRS-VYIAQET-ANVVDVIDLQ-TR 230

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQA 394
           Q+R S            S  G  +     +G    + V+  +    R L E         
Sbjct: 231 QRRASLPAGVRTAGVALSADGTRLY--ASNGGAGTVSVIDLNT--ARALAEIPVGQRPWN 286

Query: 395 PTWSPSGRSLIFSRKKDGD 413
           P  +P+G  L  +  +   
Sbjct: 287 PALTPTGDKLYVANGRSNT 305



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 52/157 (33%), Gaps = 10/157 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDR 322
             S +GK+  + V+      +  +D+     +++  T        +Y+PD   ++  S+ 
Sbjct: 119 ALSPDGKQFAVCVE--GQNQVMLIDVAQFTVQQVIATRGQAPEHCAYTPDGKWLL-TSNE 175

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              +   +  +    +  ++           ++P G  +   + +     + V+     Q
Sbjct: 176 GSNDMDMIELATHRSRGVVATSGHP--RGMAFAPDGRSVYIAQETAN--VVDVIDLQTRQ 231

Query: 383 ERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            R  L           S  G  L ++      T S +
Sbjct: 232 RRASLPAGVRTAGVALSADGTRL-YASNGGAGTVSVI 267


>gi|225430346|ref|XP_002285276.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 669

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 75/255 (29%), Gaps = 27/255 (10%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
               + +      +    G     L       ++   FSP    +  ++ D      + L
Sbjct: 389 MQGDNDLAPTEQILGTSGGKRSYTLFQGHSGPVYSATFSPLGDFILSSSADS----TIRL 444

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             T+++            +   +FS  G     S   D    I+S+D       R+    
Sbjct: 445 WSTKLNANLVCYKGHNYPVWDVQFSPMGHYFA-SSSHDRTARIWSMDRI--QPLRIMAGH 501

Query: 302 FINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             ++    +  + + I   S     + + +      +  RI     +       SP G  
Sbjct: 502 LSDVDCVQWHINCNYIATGSS---DKTVRLWDVQSGECVRIFIGHRSMVLSLAMSPDGQY 558

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS------RKKDGDT 414
           +A     G      +M  D S  R ++      +  WS     L FS           D+
Sbjct: 559 MASGDEDGT-----IMMWDLSSGRCVMPLMGHMSCVWS-----LAFSCEGSLLASGSADS 608

Query: 415 GSKLYSIDLNGRNET 429
             KL+ +  + +   
Sbjct: 609 TVKLWDVTTSTKVPR 623



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 62/197 (31%), Gaps = 37/197 (18%)

Query: 128 FRLWDVKDRKQII---GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            RLW  K    ++   G  +      +  + H  +   +                     
Sbjct: 442 IRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTA----------------- 484

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   +  MDR    +R +      +    ++  N   +A  + D      V L D 
Sbjct: 485 -------RIWSMDRI-QPLRIMAGHLSDVDCV-QWHINCNYIATGSSDK----TVRLWDV 531

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFI 303
           +     +     RSM+L+   S +G+    S  +D  + ++  DL S      L   +  
Sbjct: 532 QSGECVRIFIGHRSMVLSLAMSPDGQYMA-SGDEDGTIMMW--DLSSGRCVMPLMGHMSC 588

Query: 304 NISASYSPDSSQIVFES 320
             S ++S + S +   S
Sbjct: 589 VWSLAFSCEGSLLASGS 605


>gi|296082065|emb|CBI21070.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/255 (14%), Positives = 75/255 (29%), Gaps = 27/255 (10%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
               + +      +    G     L       ++   FSP    +  ++ D      + L
Sbjct: 396 MQGDNDLAPTEQILGTSGGKRSYTLFQGHSGPVYSATFSPLGDFILSSSADS----TIRL 451

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             T+++            +   +FS  G     S   D    I+S+D       R+    
Sbjct: 452 WSTKLNANLVCYKGHNYPVWDVQFSPMGHYFA-SSSHDRTARIWSMDRI--QPLRIMAGH 508

Query: 302 FINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             ++    +  + + I   S     + + +      +  RI     +       SP G  
Sbjct: 509 LSDVDCVQWHINCNYIATGSS---DKTVRLWDVQSGECVRIFIGHRSMVLSLAMSPDGQY 565

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS------RKKDGDT 414
           +A     G      +M  D S  R ++      +  WS     L FS           D+
Sbjct: 566 MASGDEDGT-----IMMWDLSSGRCVMPLMGHMSCVWS-----LAFSCEGSLLASGSADS 615

Query: 415 GSKLYSIDLNGRNET 429
             KL+ +  + +   
Sbjct: 616 TVKLWDVTTSTKVPR 630



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 62/197 (31%), Gaps = 37/197 (18%)

Query: 128 FRLWDVKDRKQII---GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            RLW  K    ++   G  +      +  + H  +   +                     
Sbjct: 449 IRLWSTKLNANLVCYKGHNYPVWDVQFSPMGHYFASSSHDRTA----------------- 491

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   +  MDR    +R +      +    ++  N   +A  + D      V L D 
Sbjct: 492 -------RIWSMDRI-QPLRIMAGHLSDVDCV-QWHINCNYIATGSSDK----TVRLWDV 538

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFI 303
           +     +     RSM+L+   S +G+    S  +D  + ++  DL S      L   +  
Sbjct: 539 QSGECVRIFIGHRSMVLSLAMSPDGQYMA-SGDEDGTIMMW--DLSSGRCVMPLMGHMSC 595

Query: 304 NISASYSPDSSQIVFES 320
             S ++S + S +   S
Sbjct: 596 VWSLAFSCEGSLLASGS 612


>gi|146300786|ref|YP_001195377.1| peptidase S9 prolyl oligopeptidase [Flavobacterium johnsoniae
           UW101]
 gi|146155204|gb|ABQ06058.1| peptidase family S9, prolyl oligopeptidase active site domain
           protein [Flavobacterium johnsoniae UW101]
          Length = 847

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/329 (16%), Positives = 112/329 (34%), Gaps = 72/329 (21%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           I+ +    N+  ++  E  VS      L     +  N + ++         P+F     +
Sbjct: 267 ISPQVWYGNTYNIYPQEEKVSSFKDTYLAQWLPEHENFKMISNDS-----LPQFMLTGTQ 321

Query: 226 ---VAY------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF---SSNGKRAL 273
              + +        Y  +DI   Y+ +   D+    +   R  I  P     S +GK   
Sbjct: 322 NHAILFNTVKYGPQYGKDDISDFYIYNLDNDKTTLFL---RKNIAHPSLLIPSPSGK--F 376

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINI------SAS---------YSPDSSQIVF 318
           IS  +D+   IY  +++ N  + +T     +                   +S    + V 
Sbjct: 377 ISYFRDKNWWIY--NIEKNTHKNITQNSGTDFFQNKKQHPRNADAFQQYGWS-IGDKEVL 433

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             D      L+  +++G+  +R+++ +E +  +  P +S     I     +   + +  +
Sbjct: 434 LYD---TWDLWAFKTDGTSSRRLTKGRETNTKFRHPAYS----RIIRGSSNYNGWMLDGV 486

Query: 377 KKD-----------GSQ----------ERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                         GSQ          + LL  ++S+    T SP   +L F R++    
Sbjct: 487 DLTKRILLERLTDYGSQGCIELGAKENKNLLTLDNSHFDQLTQSPDSTTL-FYREEGHYL 545

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWV 443
             ++  +   G  +TL+ +        W 
Sbjct: 546 PPRIVFVSTEGVKKTLVQSNPQQKSFYWG 574


>gi|284007139|emb|CBA72416.1| 6-phosphogluconolactonase [Arsenophonus nasoniae]
          Length = 330

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/185 (11%), Positives = 60/185 (32%), Gaps = 8/185 (4%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++V Y    +   + V+ MD +      +       +   + S +G+   + ++ D A+ 
Sbjct: 2   KQVVYVASPESKQIHVWAMDKKGKLTLLQQLTLPGEVQPMQISPDGRHLYVGIRPDFAII 61

Query: 284 IYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            Y +  +   +++ +T                 +   S  +G   +  +   GS Q  I 
Sbjct: 62  TYLISAEGKLSQQAITAIPATPTHIEIDKLGRWLFIPSYHQGNLVVLPIDQQGSAQPAIQ 121

Query: 343 QDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-----SQERLLVEDS-NLQAP 395
              +  +      S     +       +   I  +  +G       +R++       +  
Sbjct: 122 VIGDLKHPHASGVSFDNSRLFVPCLGEDHIRIYTIDNNGHLTEQVADRIVTNQGAGPRHL 181

Query: 396 TWSPS 400
            ++P+
Sbjct: 182 AFAPN 186


>gi|255532443|ref|YP_003092815.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Pedobacter heparinus DSM 2366]
 gi|255345427|gb|ACU04753.1| peptidase S9B dipeptidylpeptidase IV domain protein [Pedobacter
           heparinus DSM 2366]
          Length = 725

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 68/189 (35%), Gaps = 36/189 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAPR-----FSSNGKR 271
           +++ +    AY  + D +++ + L  + R     + +          R     FS +G +
Sbjct: 31  KWTKDGN--AYYQFTDGELVSISLAQNERKTIISRDLLYTSGQHTIGRIKDFFFSEDGSK 88

Query: 272 ALI------SVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDRE 323
            LI        + +   D +  DL++N   ++      +  + A +SPD +++ + S   
Sbjct: 89  VLIYTNSKKVWRYETRGDYFVADLKANTITQVGKDKPASSLMFAKFSPDGNKVAYVS--- 145

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDP----------------VWSPQGDLIAFTKFS 367
            K  LYV        K ++ D      +                  WSP G  IA+ +  
Sbjct: 146 -KHNLYVDDLMAKSTKALTTDGTERLINGTFDWVYEEEFDCRDGFRWSPDGQSIAYWQID 204

Query: 368 GEKFAIGVM 376
             K    +M
Sbjct: 205 ATKIKNFLM 213



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 62/164 (37%), Gaps = 32/164 (19%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDR---- 322
           +G+   IS+ ++E   I S DL   + +   +T+       +S D S++ ++ + +    
Sbjct: 44  DGELVSISLAQNERKTIISRDLLYTSGQ---HTIGRIKDFFFSEDGSKVLIYTNSKKVWR 100

Query: 323 -EGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            E +   +V     +   ++ +DK AS      +SP G+ +A+      K  + V     
Sbjct: 101 YETRGDYFVADLKANTITQVGKDKPASSLMFAKFSPDGNKVAYVS----KHNLYVDDLMA 156

Query: 381 SQERLLVEDSNL------------------QAPTWSPSGRSLIF 406
              + L  D                         WSP G+S+ +
Sbjct: 157 KSTKALTTDGTERLINGTFDWVYEEEFDCRDGFRWSPDGQSIAY 200



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 48/311 (15%), Positives = 98/311 (31%), Gaps = 56/311 (18%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPNQQKVAYATYDD---EDI 236
           S+ V     +    V D     I  +   +    L   +FSP+  KVAY +  +   +D+
Sbjct: 95  SKKVWRYETRGDYFVADLKANTITQVGKDKPASSLMFAKFSPDGNKVAYVSKHNLYVDDL 154

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMIL--------APRFSSNGKRALIS----------VQK 278
           +         D   + I      +           R+S +G+               +  
Sbjct: 155 MAKSTKALTTDGTERLINGTFDWVYEEEFDCRDGFRWSPDGQSIAYWQIDATKIKNFLMI 214

Query: 279 DEAMDIY---------------------SVDLQSNATERL-TNTLFI-NISAS--YSPDS 313
           D    IY                      V++ S  T+ L      I N      + P S
Sbjct: 215 DNTDSIYPFTIPVEYPKVGEDPSSCKVGVVNIASAQTKWLNIPGDAIQNYIPRMGWIPGS 274

Query: 314 SQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-----WSPQGDLIAFTKF 366
           ++++ +  +  +   +L+V  +     + I  + + ++ D       W  +     +   
Sbjct: 275 NEVILQQLNREQNVSKLFVANAATGVAQNILTETDQAWIDAADENWEWVNENKEFIWMSE 334

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR--SLIFSRKKDGDTGSKLYSIDLN 424
                    + KDG ++ L+ +             +  SL +       T   LY   L+
Sbjct: 335 KDGWRHAYRISKDGKRQTLITKGDFDVIEKSLVDEKNNSLYYMASPGNATQKYLYKTKLS 394

Query: 425 GRNETLINTPA 435
           G ++  + TP+
Sbjct: 395 GGSKPEMVTPS 405


>gi|195383766|ref|XP_002050597.1| GJ22241 [Drosophila virilis]
 gi|194145394|gb|EDW61790.1| GJ22241 [Drosophila virilis]
          Length = 373

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 70/212 (33%), Gaps = 21/212 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  ++Y      + +   RF+P    +  A+ D      + L D    +  K +      
Sbjct: 66  GYELKYTLEGHQRHITAVRFAPGGDWLTSASADS----LLKLWDLGTAQLNKTLAGHVLG 121

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVF 318
           I    ++ +GK    S   D+ + ++  D         +        + S +P ++ I  
Sbjct: 122 INDVAWAPDGKFMA-SCSDDKTIRLW--DPHGGLCLRTMEGHAGYVFACSINPQANLIAS 178

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S       + +         +I            ++  G L     F G    + +   
Sbjct: 179 TSF---DCTVRLWDVRNGKSLKIIPAHMDPISSVDFNRDGTLFVTGSFDG---LVRIWDT 232

Query: 379 -DGSQERLLVEDSNLQAPT----WSPSGRSLI 405
             G   + L+++    +P     ++P+GR ++
Sbjct: 233 ISGQVLKTLIDE--DNSPVGYVKFAPNGRYIL 262



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 59/176 (33%), Gaps = 8/176 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S    + L + D   A +          + +  ++P+ + +A  + D      + L D  
Sbjct: 94  SASADSLLKLWDLGTAQLNKTLAGHVLGINDVAWAPDGKFMASCSDDK----TIRLWDPH 149

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + +      + A   +        S   D  + ++ V     + + +   +    
Sbjct: 150 GGLCLRTMEGHAGYVFACSINPQANLIA-STSFDCTVRLWDV-RNGKSLKIIPAHMDPIS 207

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           S  ++ D +  V  S  +G  +++    +G   K +  +  +      ++P G  I
Sbjct: 208 SVDFNRDGTLFVTGSF-DGLVRIWDT-ISGQVLKTLIDEDNSPVGYVKFAPNGRYI 261


>gi|167045451|gb|ABZ10105.1| putative WD domain, G-beta repeat [uncultured marine microorganism
           HF4000_APKG10F17]
          Length = 825

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 51/282 (18%), Positives = 107/282 (37%), Gaps = 25/282 (8%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           S T   G F+  I    E++V+G + NS+ +  +DG      + S    ++    S + +
Sbjct: 72  SYTAGDGIFSVAISSNGETIVAGSLDNSIYLFSKDGT--LLWSYSTGNRVWSVAISEDGE 129

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +A  ++D++    VYL D +    P       + +L+   S++G+          +  +
Sbjct: 130 TIAVGSWDNK----VYLFD-KDSGTPLWSHTTGNWVLSVDISADGEMIAA-----GSDKV 179

Query: 285 YSVDLQSNATERLTNTLFINISA-SYSPD--SSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           Y  D  S+   R + +    + A + S D    Q    +  +   ++Y+  +N S     
Sbjct: 180 YLFDRNSSTP-RWSYSTGDTVRAVALSEDFFGQQRYHLAAGDWNGKVYLFHNNNSVPLWN 238

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
               + S +    +     +A      + +++ ++  DG+          + +  +S  G
Sbjct: 239 HTTGD-SIYSVAITDDSGYVAAGS---KDYSVYLLDGDGTSLWSYATGGTVLSLDFSVDG 294

Query: 402 RSLIFSRKK----DGDTGSKLYSIDLNGRNETLINTPAYASD 439
             L     K    D D G+ L+S    G +   +   A   D
Sbjct: 295 EELAVGSDKVYLFDKDGGTPLWSY-TTGNSVKSVGISADGKD 335


>gi|291045307|ref|NP_001166937.1| aladin isoform 2 [Homo sapiens]
 gi|37930677|gb|AAP69911.1| achalasia variant [Homo sapiens]
          Length = 513

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 98/299 (32%), Gaps = 33/299 (11%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSI-----TGEKGDFNSRILFVSESVVSGII 189
           + + + G  + S P  +R     I+  + Q       T  + D  +R  F+         
Sbjct: 22  NNELVTGSSYESPPPDFR--GQWINLPVLQLTKDPLKTPGRLDHGTRTAFIHHREQVWKR 79

Query: 190 KNSLC-----------VMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATYDDEDI 236
             ++            + + +     ++  +    L   R+  S +     + +   ED+
Sbjct: 80  CINIWRDVGLFGVLNEIANSEEEVFEWVKTASGWALALCRWASSLHGSLFPHLSLRSEDL 139

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
           +  +   T     P      +  + +  +       L    +   + I+++D  S +T  
Sbjct: 140 IAEFAQVTNCTIVPSLKHRLQRNVASLAWKPLSASVLAVACQS-CILIWTLDPTSLSTRP 198

Query: 296 -----RLTNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                ++ +        S +++P   +++  S  +    + V   +      +   +   
Sbjct: 199 SSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIRVWDVSTETCVPLPWFRGGG 256

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
             + +WSP G  I  T  S   F +   +     ER        Q   WSP G  L+F+
Sbjct: 257 VTNLLWSPDGSKILATTPS-AVFRVWEAQMWT-CERWPTLSGRCQTGCWSPDGSRLLFT 313


>gi|195027371|ref|XP_001986556.1| GH20462 [Drosophila grimshawi]
 gi|193902556|gb|EDW01423.1| GH20462 [Drosophila grimshawi]
          Length = 952

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 75/247 (30%), Gaps = 26/247 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +                +    +SP+ Q +     D +    V L +T+      
Sbjct: 373 QLLVWEWQSEQYIMKQQGHSSEMSCIAYSPDGQYIVTGGEDSK----VKLWNTQSSFCFV 428

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-------FIN 304
                 S +   +FS N K+ L+S   D  +  + + ++       T+          ++
Sbjct: 429 TFSEHTSGVTGVQFSRN-KKFLVSSSLDGTVRAFDI-IRYRNFRTFTSPTPAQFACVALD 486

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S        Q VF        ++Y+          +    E       +SP G      
Sbjct: 487 YSGELVVAGGQDVF--------EIYLWSIKTGKLLEVISGHEGPVTSVAFSPVGTSSTLI 538

Query: 365 KFS-GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG----DTGSKLY 419
             S  +   I    +  S+   +   S++    +SPSG  +  +         D  S   
Sbjct: 539 SGSWDKTVKIWNCLESNSEHETIDALSDVTCVAFSPSGEEVAVATLVGNIIIFDVKSATQ 598

Query: 420 SIDLNGR 426
            + + GR
Sbjct: 599 VVTIEGR 605



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 40/101 (39%), Gaps = 6/101 (5%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++PD + ++      G  ++ V     +  + +S +   +Y +   SP G L+      G
Sbjct: 22  FTPDGNSVI---SPVGN-RITVYDLKNNKSRTLSLESRYNYTNIDLSPDGSLMIAVNEQG 77

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           +   I ++       R   +   +Q   +SP G     +R+
Sbjct: 78  DAHLISMVSC-TVIHRHKFQTG-VQCIKFSPDGSYFAVARE 116


>gi|162451629|ref|YP_001613996.1| hypothetical protein sce3357 [Sorangium cellulosum 'So ce 56']
 gi|161162211|emb|CAN93516.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
           cellulosum 'So ce 56']
          Length = 455

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 80/261 (30%), Gaps = 56/261 (21%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED----------- 235
           G  +  + V  RDG    YL    + I     +SP+ +++AY     +            
Sbjct: 19  GAARQLVRVDGRDG--PEYLGVGVEGI----AWSPDGKRLAYPARRRDGWTVVQGGHEGP 72

Query: 236 -----ILRVYLMDTRIDRAPKRIGNF---RSMILAPRF----------SSNGKRALISVQ 277
                   V+     +  A  R G +   R     P F          S +G+R   + +
Sbjct: 73  VFSGIGAIVWSAAGELSYAATRAGRWMVVRGGREGPAFDALFGRSLVYSRDGRRFGYAGE 132

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D    I  +D              I     +S D  +  + + R G+    V   +G  
Sbjct: 133 RDGRA-IAVIDGVEGPP-----YDGI-GGLRFSADGRRAAYIAHRGGETHGVV---DG-- 180

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              +      +  +   SP G  +A +   G  +   +    G     L       A  +
Sbjct: 181 ---VLSPGYEAIAEIALSPAGGRVALSVKEGGLWHAVIDGAKGEGFERLS------AIQF 231

Query: 398 SPSGRSLIFSRKKDGDTGSKL 418
           S  G  + ++ ++       +
Sbjct: 232 SARGDRVAYAARRGRKEQVVI 252



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 27/199 (13%), Positives = 67/199 (33%), Gaps = 26/199 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ ++ A    +     ++  +D R       +G     +    +S +GKR     ++ 
Sbjct: 6   SPD-RRHAVEVIEHGAARQLVRVDGRDGPEYLGVG-----VEGIAWSPDGKRLAYPARRR 59

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +   +    +Q      + + +   +   +S    ++ + + R G+   +++   G +  
Sbjct: 60  DGWTV----VQGGHEGPVFSGIGAIV---WSAAG-ELSYAATRAGR---WMVVRGGREGP 108

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                   S    V+S  G    +      + AI V+               +    +S 
Sbjct: 109 AFDALFGRSL---VYSRDGRRFGYAGERDGR-AIAVIDGVEGPPY-----DGIGGLRFSA 159

Query: 400 SGRSLIFSRKKDGDTGSKL 418
            GR   +   + G+T   +
Sbjct: 160 DGRRAAYIAHRGGETHGVV 178



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 66/193 (34%), Gaps = 29/193 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + ++  YA   + D   + ++D         IG         RFS++G+RA     +
Sbjct: 120 YSRDGRRFGYA--GERDGRAIAVIDGVEGPPYDGIGGL-------RFSADGRRAAYIAHR 170

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                   VD        L+         + SP   ++       G     +  + G   
Sbjct: 171 GGETHG-VVDG------VLSPGYEAIAEIALSPAGGRVALSVKEGGLWHAVIDGAKGEGF 223

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           +R+S           +S +GD +A+    G K  + +    G       +     +  +S
Sbjct: 224 ERLS--------AIQFSARGDRVAYAARRGRKEQVVIDGAMGPAY----DAVMPWSLAFS 271

Query: 399 PSGRSLIFSRKKD 411
             GR L ++ ++ 
Sbjct: 272 REGR-LAYAARRG 283


>gi|20091529|ref|NP_617604.1| hypothetical protein MA2705 [Methanosarcina acetivorans C2A]
 gi|19916683|gb|AAM06084.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 330

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 62/178 (34%), Gaps = 23/178 (12%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------SDREGKEQ 327
           S Q  +   +Y  +L ++   +LT     +  +S   +  +IV+        S+R     
Sbjct: 135 SYQNAQYNSLYLYNLSTHKEVQLTPYKHAHFGSSIYEN--KIVWTQANRVNSSERS--TN 190

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +          I +   A          GD++ + +       I +      + R + 
Sbjct: 191 ISIYDIPTKRVSDIGRSGTAQDGKIY----GDIVVWVESQNGSMNIYMRDIAKHETRQVT 246

Query: 388 EDSNLQAPTWSPS--GRSLIF-SRKKDGDTGS-KLYSIDLNGRNETLINTPAYASDPQ 441
            D N      SP   G  +++ S  + G+  S  +Y  ++     T I    YA +P 
Sbjct: 247 FDGNST----SPDVYGDRIVWESAYRAGNNPSGDIYMYNILTNETTRITNSTYAREPA 300


>gi|168703814|ref|ZP_02736091.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 1086

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 56/348 (16%), Positives = 107/348 (30%), Gaps = 60/348 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ I       RVE  L D    + +   +    PAS  ++A   + D     T  K D 
Sbjct: 641 GKWIVAADGSGRVE--LLDAATGQLVRTLQSAGPPAS--RLA--FAPDGKSVATAHK-DA 693

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             RI      + SG++   + +                        SP +Q V ++    
Sbjct: 694 KIRIW----EIESGLLAREIEIAP----------------------SPKEQPVWFSGLKF 727

Query: 234 EDILRVYLM------DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
               RV +           D A  +     +   A  F S+G+   +   +D    ++ +
Sbjct: 728 APNSRVVVSSCEPFGTVAFDSATGKRLWAEAKYGAVAFHSDGRTLAV-GSRDG--KLHLM 784

Query: 288 DLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           D  +  +    +    +     + SPD   +        +  +Y+      + ++  Q  
Sbjct: 785 DAATGKSR--ASAPAQDTVNDIAVSPDGRVLA---TVGHQGLVYLCNPATGEVQKQWQAH 839

Query: 346 EASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
              +  +   + P G  +A         AI  +       R     S   +  ++P GR+
Sbjct: 840 TQGHVAWGASFGPGGIWLA--TAGDRTVAIWDVATGTLLRRFEGHTSRAYSVDFAPDGRT 897

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNET-------LINTPAYASDPQWVG 444
           ++ S          +      G   T       L+  PA A    W+ 
Sbjct: 898 VLSSSMDLTGYVWDVRPAPAPGAPRTTAQLWDDLLGEPADAFRAVWLA 945



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 51/360 (14%), Positives = 101/360 (28%), Gaps = 52/360 (14%)

Query: 75  RSDV----FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRL 130
            S      F          +  +       + W   G+  LV  R              L
Sbjct: 399 NSGKRLVTFKPPPAPRGPNQPFDYGYT---RLWFPTGSAHLVAVRQKST---------VL 446

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS--GI 188
            D    K+I    F +  AS       + +    +IT    D      F   +     G+
Sbjct: 447 IDPPTGKEIRSLGFAAEAASPSPNGLRLYEVSNNTITAYDSDGKQARQFEHTAPPEAIGL 506

Query: 189 IKNSLCVMDRDGANIR--------------YLTPSRD---QILFEPRFSPNQQKVAYATY 231
                 +   DG+  R               +  S+D     +     +P+++ +   T 
Sbjct: 507 DPMGTTLAAADGSEGRIRVWDVATGQVLNNVVVTSKDKELPAITVLAITPDRKTLLVGTQ 566

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                  ++  D    ++   I      +    F   G+  +          +   DL +
Sbjct: 567 RG----VIHRFDIGTGKSLTPIREHADWVTGLAFIDEGRTLV---STSWDHRVCRCDLAT 619

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               R       ++    S D   IV     +G  ++ ++ +      R  Q        
Sbjct: 620 GKPLRDPGRYSGHLRLDRSRDGKWIVAA---DGSGRVELLDAATGQLVRTLQSAGPPASR 676

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW------SPSGRSLI 405
             ++P G  +A T     K  I  ++       + +  S  + P W      +P+ R ++
Sbjct: 677 LAFAPDGKSVA-TAHKDAKIRIWEIESGLLAREIEIAPSPKEQPVWFSGLKFAPNSRVVV 735


>gi|75908366|ref|YP_322662.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
 gi|75702091|gb|ABA21767.1| WD-40 repeat-containing protein [Anabaena variabilis ATCC 29413]
          Length = 589

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/287 (13%), Positives = 88/287 (30%), Gaps = 34/287 (11%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E +LWD+   + I       + + +  I   + D++        G          + +VS
Sbjct: 315 ETKLWDLSQGELI------DTLSEYPWIVSGLVDEVNSLAFSADG----------QMLVS 358

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G   +++ +      ++  +    + I+    F+P+ Q +A       D  R+   D   
Sbjct: 359 GGADSTIKIWHTGALDLIDILHKHNGIVRCAAFTPDGQMLA----TGGDDRRILFWDLMH 414

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE------RLTNT 300
            +    +    +   +   S +G+  +    +   +   S        +       L   
Sbjct: 415 RQVKAILSLDDTAAHSLVLSRDGQTLVTGSYRKIKVWQTSGSWFGKNLKDAQPLHTLMGH 474

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             I  S + S D   ++  S     + + +         R  +      +    SP   +
Sbjct: 475 GHIVRSLAMSKDGQLLISGS---WDQTIKIWHLATGRLIRTLKGHTDKVYAIALSPDEQI 531

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
           IA          I +   +  +             A T++ SG  L+
Sbjct: 532 IASGSSDQT---IKLWHLETGELLATFTGHTDIVTALTFTTSGEMLV 575


>gi|323447025|gb|EGB02995.1| hypothetical protein AURANDRAFT_34640 [Aureococcus anophagefferens]
          Length = 309

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/174 (11%), Positives = 47/174 (27%), Gaps = 18/174 (10%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D         +      +       +G+R ++S   DE + ++  D  +         
Sbjct: 5   VWDAATGECVATLAGHSGWVRDVAVFPDGRR-VVSGSADETVKVW--DAATGECVATLQH 61

Query: 301 LFINISA------SYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPV 353
                        +  PD  ++V  +D      + V  +   +    ++           
Sbjct: 62  GNDPWDPDGVNCVAVFPDGRRVVSGAD---DWTVMVWDAATGECVATLNTGHRDEVNCVA 118

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLI 405
            SP G  +           + V      +    L      +    + P GR ++
Sbjct: 119 VSPDGRRVVSGSADET---VKVCDAATGECVATLAGHSKGVYGVAFFPDGRRVV 169



 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/267 (14%), Positives = 75/267 (28%), Gaps = 39/267 (14%)

Query: 101 QDWNSLGAQVLVT---GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHT 157
             W+  G   +     GR +  G D   V   +WD    + +                H 
Sbjct: 64  DPWDPDGVNCVAVFPDGRRVVSGADDWTV--MVWDAATGECVATLN----------TGHR 111

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
             D++        G            VVSG    ++ V D              + ++  
Sbjct: 112 --DEVNCVAVSPDG----------RRVVSGSADETVKVCDAATGECVATLAGHSKGVYGV 159

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRALIS 275
            F P+ ++V       E    V + D         +    S +         +G+R ++S
Sbjct: 160 AFFPDGRRVV-----SESGKTVKVWDAVTGECVATLAGHSSTVWRGGVAVFPDGRR-VVS 213

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D  + ++             ++  +N  A + PD  ++V  S     + + V  +  
Sbjct: 214 GSLDNTVKVWDAATGEGVATLRGHSDEVNCVAVF-PDGRRVVSGSK---DKTVKVWDAAT 269

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIA 362
            +                  P G  + 
Sbjct: 270 GECVATLAGHSGEVNCLAIFPNGRRVV 296



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 30/263 (11%), Positives = 69/263 (26%), Gaps = 59/263 (22%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----------------- 234
           +L V D                + +    P+ ++V   + D+                  
Sbjct: 2   TLKVWDAATGECVATLAGHSGWVRDVAVFPDGRRVVSGSADETVKVWDAATGECVATLQH 61

Query: 235 --------------------------DILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSS 267
                                     D   V + D         +    R  +     S 
Sbjct: 62  GNDPWDPDGVNCVAVFPDGRRVVSGADDWTVMVWDAATGECVATLNTGHRDEVNCVAVSP 121

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           +G+R ++S   DE + +   D  +      L          ++ PD  ++V ES     +
Sbjct: 122 DGRR-VVSGSADETVKVC--DAATGECVATLAGHSKGVYGVAFFPDGRRVVSES----GK 174

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWS--PQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + V  +   +         ++ +    +  P G  +           + V      +  
Sbjct: 175 TVKVWDAVTGECVATLAGHSSTVWRGGVAVFPDGRRVVSGSLDNT---VKVWDAATGEGV 231

Query: 385 LLVEDSNLQAPTWS--PSGRSLI 405
             +   + +    +  P GR ++
Sbjct: 232 ATLRGHSDEVNCVAVFPDGRRVV 254


>gi|282877771|ref|ZP_06286584.1| dipeptidyl peptidase IV domain protein [Prevotella buccalis ATCC
           35310]
 gi|281300087|gb|EFA92443.1| dipeptidyl peptidase IV domain protein [Prevotella buccalis ATCC
           35310]
          Length = 722

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 21/153 (13%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +  A  S D  ++V  S + GK+   +   N +   +I      S+   + SP G  +
Sbjct: 35  GTDQYARISKDGERVVRFSFKTGKQTAVLFDVNHTMGAKI-----DSFDGYILSPDGAKM 89

Query: 362 AFTKFSGEKFA------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                +   +         +     ++   L E    Q P WS   R + F R  +    
Sbjct: 90  LIQTKTERIYRRSFKAQYYIYTIASTKLEPLSEGGPQQVPVWSADSRQIAFVRDNNIHLI 149

Query: 416 SKLYS-----IDLNGRNETLINTPAYASDPQWV 443
             LY      +  +G+   +IN       P WV
Sbjct: 150 KLLYDNAESQVTKDGKFNEIINGV-----PDWV 177


>gi|223997136|ref|XP_002288241.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220975349|gb|EED93677.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 662

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 63/211 (29%), Gaps = 41/211 (19%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-----TRI 246
            LC + +DG +             +   S +   +     D E      +++        
Sbjct: 105 RLCQLLKDGTSKPISPEGDRFRYADGVLSEDGSLIYCVREDHEKPEPKNVVNEIVSINVS 164

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-------- 298
           D + K I        APR S +GK+               +   +    RLT        
Sbjct: 165 DGSMKVIATGNDFYAAPRLSPDGKQLAYVTWAHPN-----MPWDATEL-RLTPVESSSSD 218

Query: 299 -------NTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                    +  + S     + P +  + + SD+ G   +Y +   G +   +  + +  
Sbjct: 219 SKSHELIAGIDGDTSVIQPLWHPQTGDLHYISDQSGYYNIYRL---GYETSILPMEYDFG 275

Query: 349 YFDPVWS---------PQGDLIAFTKFSGEK 370
              P W+         P G L+A    +G  
Sbjct: 276 GSAPGWALGQQGYSFLPDGRLVAQYNKNGSS 306



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 71/220 (32%), Gaps = 55/220 (25%)

Query: 266 SSNGKRALIS---VQKDEAM------------------DIYSVDLQSNATERLTNTLFIN 304
           S  G R   +   + +D ++                  +I S+++   + + +       
Sbjct: 119 SPEGDRFRYADGVLSEDGSLIYCVREDHEKPEPKNVVNEIVSINVSDGSMKVIATGNDFY 178

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-----------------DKEA 347
            +   SPD  Q+ + +          M  + ++  R++                  D + 
Sbjct: 179 AAPRLSPDGKQLAYVTWAHPN-----MPWDATEL-RLTPVESSSSDSKSHELIAGIDGDT 232

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--------NLQAPTWSP 399
           S   P+W PQ   + +       + I  +  + S   +  +            Q  ++ P
Sbjct: 233 SVIQPLWHPQTGDLHYISDQSGYYNIYRLGYETSILPMEYDFGGSAPGWALGQQGYSFLP 292

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            GR +    + + +  S L   ++N ++    +   + S+
Sbjct: 293 DGRLVA---QYNKNGSSVLVVANVNQKDSPATDVQEFGSN 329



 Score = 37.3 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 9/85 (10%)

Query: 333 SNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFA--------IGVMKKDGSQE 383
                 K IS + +   Y D V S  G LI   +   EK          + +   DGS +
Sbjct: 110 LKDGTSKPISPEGDRFRYADGVLSEDGSLIYCVREDHEKPEPKNVVNEIVSINVSDGSMK 169

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSR 408
            +   +    AP  SP G+ L +  
Sbjct: 170 VIATGNDFYAAPRLSPDGKQLAYVT 194


>gi|114644488|ref|XP_001139640.1| PREDICTED: aladin isoform 1 [Pan troglodytes]
          Length = 513

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/299 (14%), Positives = 98/299 (32%), Gaps = 33/299 (11%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSI-----TGEKGDFNSRILFVSESVVSGII 189
           + + + G  + S P  +R     I+  + Q       T  + D  +R  F+         
Sbjct: 22  NNELVTGSSYESPPPDFR--GQWINLPVLQLTKDPLKTPGRLDHGTRTAFIHHREQVWKR 79

Query: 190 KNSLC-----------VMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATYDDEDI 236
             ++            + + +     ++  +    L   R+  S +     + +   ED+
Sbjct: 80  CINIWRDVGLFGVLNEIANSEEEVFEWVKTASGWALALCRWASSLHGSLFPHLSLRSEDL 139

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE- 295
           +  +   T     P      +  + +  +       L    +   + I+++D  S +T  
Sbjct: 140 IAEFAQVTNCTIVPSLKHRLQRNVASLAWKPLSASVLAVACQS-CILIWTLDPTSLSTRP 198

Query: 296 -----RLTNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                ++ +        S +++P   +++  S  +    + V   +      +   +   
Sbjct: 199 SSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIRVWDVSTETCVPLPWFRGGG 256

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
             + +WSP G  I  T  S   F +   +     ER        Q   WSP G  L+F+
Sbjct: 257 VTNLLWSPDGSKILATTPS-AVFRVWEAQMWT-CERWPTLSGRCQTGCWSPDGSRLLFT 313


>gi|59802493|gb|AAX07490.1| unknown [Gemmata sp. Wa1-1]
          Length = 756

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 81/238 (34%), Gaps = 29/238 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L       + +   SP+  + A   +D +  +       R+   P R G  R ++ A  
Sbjct: 268 QLLTGHSSAVNDIVLSPDGTRCASVDWDGKLFIWDAKTGARLHNPPTRPG-ARGLVCATT 326

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-----NTLFINISASYSPDSSQIVFE 319
              +G+  L++ ++   M I + D  +    R+       T  I +S        + +  
Sbjct: 327 --PDGRYLLVAGER---MPILAFDWATGREVRVYPPHEKATWGIAVSP-----GCEHLLT 376

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAI 373
           S  +G   + +      D+ R  +      +   +SP G   A     G          +
Sbjct: 377 SGADGA--VVLRDLATGDEIRRFEFAAKLVWTVAFSPDGTKFAAGCGEGPVPEESNVIKV 434

Query: 374 GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                DG +   L    S ++A  + P G++L        D   +L+++       T+
Sbjct: 435 WA-TADGKELNRLTGHTSEVRAIEFRPDGQALA---SGGFDGTIRLWNLTTGTEIRTI 488



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 73/266 (27%), Gaps = 37/266 (13%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  +   D        + P  ++  +    SP  + +  +  D      V L D      
Sbjct: 338 RMPILAFDWATGREVRVYPPHEKATWGIAVSPGCEHLLTSGADG----AVVLRDLATGDE 393

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-----DLQSNATERLTNTLFIN 304
            +R      ++    FS +G +      +    +  +V             RLT      
Sbjct: 394 IRRFEFAAKLVWTVAFSPDGTKFAAGCGEGPVPEESNVIKVWATADGKELNRLTGHTSEV 453

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +  + PD   +      +G  +L+        + R     E+      + P G  +   
Sbjct: 454 RAIEFRPDGQALA-SGGFDGTIRLW--NLTTGTEIRTIDAHESIVERVRFLPDGRRVLTC 510

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DL 423
              G          +G   ++    +  +   W            + G     +  +   
Sbjct: 511 ---GGPMQDVRPNGEGGTVKIWDTVTGRELTCW------------RGGPWSDLISIVPSR 555

Query: 424 NGR---------NETLINTPAYASDP 440
           +GR         N  L + P   +DP
Sbjct: 556 DGRSAVAGGRDKNVRLWSLPPEPTDP 581



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 55/162 (33%), Gaps = 17/162 (10%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINI 305
           P+ +    S +     S +G R   SV  D  + I+  D ++ A  RL    T      +
Sbjct: 267 PQLLTGHSSAVNDIVLSPDGTRCA-SVDWDGKLFIW--DAKTGA--RLHNPPTRPGARGL 321

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             + +PD   ++   +R     +         + R+    E + +    SP  + +    
Sbjct: 322 VCATTPDGRYLLVAGER---MPILAFDWATGREVRVYPPHEKATWGIAVSPGCEHLL--- 375

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLI 405
            SG   A+ +       E    E +   +    +SP G    
Sbjct: 376 TSGADGAVVLRDLATGDEIRRFEFAAKLVWTVAFSPDGTKFA 417


>gi|58270986|ref|XP_572649.1| transcription corepressor [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57228908|gb|AAW45342.1| transcription corepressor, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 827

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/239 (13%), Positives = 76/239 (31%), Gaps = 39/239 (16%)

Query: 218 RFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNG 269
              P+  ++A    D +      +  + +   + +  PK +    +    +L+ R++ +G
Sbjct: 26  SVHPDGTRLATGGLDHKVKIWSTLPILDVEAEKEEENPKLLCTMSSHTGSVLSVRWAHHG 85

Query: 270 KRALISVQKDEAMDIYSVDLQSNA---------------TERLTNTLFINISASYSPDSS 314
           +    +   D+ + I+ +D                      RL   +   +  ++S D +
Sbjct: 86  RFLA-TGSDDQVIMIWGLDPDGGGRLWGSDEINVENWKALTRLVGHVADVVDLAWSRDDT 144

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +           +++      ++ R     +       W P G+ +A T+   +   I 
Sbjct: 145 MLA---SVGLDSTVWIWDGLTFERLRKLDLHQGFVKGVCWDPVGNYLA-TQSDDKTVKIW 200

Query: 375 VMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
               +       +      +P        +WSP G  +  S   +G        ID  G
Sbjct: 201 --NTEDWSLAETISKPFETSPQSTFFRRLSWSPDGAFIAASNAMNGPVFVA-AVIDREG 256


>gi|313886427|ref|ZP_07820146.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924108|gb|EFR34898.1| OmpA family protein [Porphyromonas asaccharolytica PR426713P-I]
          Length = 647

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 65/186 (34%), Gaps = 40/186 (21%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDR--------------EGKEQLYVM--QSNGSDQK 339
           RL  + +   +  Y+PD + + F S R               G   LY++   ++G   +
Sbjct: 145 RLLISPYAEFAPCYAPDGTTLYFTSSRVPLRDMLQESEVTGLGTNNLYMIKQDASGKWSR 204

Query: 340 RISQDKEASY----FDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKD-----GSQERL 385
             S     +       P  +  G+ + +     +        I    K      G  ER+
Sbjct: 205 PDSVPGSINTAEDEGTPSITTDGNTLYYSYAEQSSTYDRTVQIYKASKSSQGGWGKGERV 264

Query: 386 LV-EDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN----GRNETL---INTPA 435
            + EDS      P    SGR L F  +  G  G  LY I L+    G+ E L   INTP 
Sbjct: 265 PIWEDSLRMAAHPAIDASGRYLYFVSEGAGLGGKDLYRIALSEHGWGKPENLGNEINTPG 324

Query: 436 YASDPQ 441
               P 
Sbjct: 325 DELFPT 330



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 82/291 (28%), Gaps = 72/291 (24%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDE-------------DILRVYLMDTRIDRAPKRIGNF 256
                F P ++P+   + + +                     +Y++         R  + 
Sbjct: 149 SPYAEFAPCYAPDGTTLYFTSSRVPLRDMLQESEVTGLGTNNLYMIKQDASGKWSRPDSV 208

Query: 257 RSMI------LAPRFSSNGKRALI-----SVQKDEAMDIYSVDLQS----NATERLT--- 298
              I        P  +++G          S   D  + IY     S       ER+    
Sbjct: 209 PGSINTAEDEGTPSITTDGNTLYYSYAEQSSTYDRTVQIYKASKSSQGGWGKGERVPIWE 268

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-----QDKEASYFDPV 353
           ++L +    +       + F S+  G          G D  RI+       K  +  + +
Sbjct: 269 DSLRMAAHPAIDASGRYLYFVSEGAG--------LGGKDLYRIALSEHGWGKPENLGNEI 320

Query: 354 WSPQ--------GDLIAFTKFSG----EKFAIGVMKKDG-SQERLLVEDSNLQAP----- 395
            +P         GD   +   +G        +   + D     ++    + + +P     
Sbjct: 321 NTPGDELFPTMVGDSTLYFSSNGRVGLGGLDLYKAQMDSLGGWQVTHLGAPMNSPADDYA 380

Query: 396 -TWSP---SG--RSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASD 439
            T+SP   SG       S  +    G   LY   L     T+I    +  D
Sbjct: 381 LTFSPKPQSGLAEEGYLSSTRGDQRGRPHLYRFSL---PATIIRIDGFVMD 428


>gi|302538584|ref|ZP_07290926.1| WD40 domain-containing protein [Streptomyces sp. C]
 gi|302447479|gb|EFL19295.1| WD40 domain-containing protein [Streptomyces sp. C]
          Length = 391

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 64/199 (32%), Gaps = 12/199 (6%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           GD     L +     +   +  + V D +   +  +          P  S + + VAY  
Sbjct: 187 GDGRYTALALLMRKPAPTNRQRVEVHDWNTGAVVTVASFEHTYPARPSISGDGRYVAYQD 246

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              +D   V++ D     +   +    +     + S +G   +           Y  DL+
Sbjct: 247 GAAKD---VFVWDRTTGTSTGPVEGPATAASLLQLSDDGGTVVYLS----GSSTYVHDLR 299

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           S  T  +T+   +    +  P    +++     G   L +        + +S D+ A+  
Sbjct: 300 SGTTRTVTDVKGL----AIDPTGRHLLYAPTGTGGPSLVLRDLETGADQVVS-DRPATAG 354

Query: 351 DPVWSPQGDLIAFTKFSGE 369
               S  G  + F   + +
Sbjct: 355 IDAVSTGGRDVVFQSAADD 373


>gi|224094450|ref|XP_002190128.1| PREDICTED: similar to apoptotic peptidase activating factor 1
            [Taeniopygia guttata]
          Length = 1249

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 92/265 (34%), Gaps = 37/265 (13%)

Query: 187  GIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G    ++ V+   DG  ++     R  +    RF+P+ Q +  + +D   +++V+     
Sbjct: 980  GQESGTIKVLQLSDGKVLKSWEAYRTSVQHC-RFTPDCQTLISSAHD--PVIQVWNWQLS 1036

Query: 246  ----IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNT 300
                +    + I +FR +             ++S   D  + ++  ++ +   ER     
Sbjct: 1037 ECVFLRGHNEAIKDFRLLE---------NSKILSWSFDGTVKVW--NITTGNPERDFACH 1085

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                +S + SPD S+    S     +   +     S      +D EA      +SP   L
Sbjct: 1086 RDAVLSCAVSPDGSKF---SSASADKTAKIWSFESSSVLHELKDHEACVRCCTFSPNNKL 1142

Query: 361  IAFTKFSGEKFAIGVM---------KKDGSQERLLVEDSNLQAPTWSPSGRSLI----FS 407
            +A T     +  I  +               E        +   ++SP  + L+    + 
Sbjct: 1143 LA-TGDDKGEIRIWDVLTGTLLHFCSPVTVDEGEPTHGGWVTDLSFSPDSKMLVSSGGYL 1201

Query: 408  RKKDGDTGSKLYSIDLNGRNETLIN 432
            +  +  TG  L +   NG N   I+
Sbjct: 1202 KWWNVTTGESLQTFYTNGTNLKSIH 1226


>gi|114550698|ref|XP_001151523.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
          Length = 442

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D +   I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 10  QYRLVVRDVNTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYKRGLVQVWSLEQPEWHC 67

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 68  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACLQGITF 123

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + +   +     R             W+P G ++A    +  
Sbjct: 124 TRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-VWDTCL 182

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKD 411
           ++ I +   DG   RLL   S  +      +  WSPS + L       
Sbjct: 183 EYKILLYSLDG---RLLSTYSAYEWSLGIKSVAWSPSSQFLAVGSYDG 227


>gi|114550704|ref|XP_001151709.1| PREDICTED: similar to WDR8 protein isoform 3 [Pan troglodytes]
          Length = 353

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D +   I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDVNTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYKRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACLQGITF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + +   +     R             W+P G ++A    +  
Sbjct: 142 TRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-VWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKD 411
           ++ I +   DG   RLL   S  +      +  WSPS + L       
Sbjct: 201 EYKILLYSLDG---RLLSTYSAYEWSLGIKSVAWSPSSQFLAVGSYDG 245



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 9/157 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK     VQ      +   D+ +    +L   L       +S DS  I+    + G
Sbjct: 16  FSPDGKYLASCVQ----YRLVVRDVNTLQILQLYTCLDQIQHIEWSADSLFILCAMYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++    +      +  A      WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSVS 127

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +       Q  T++  GR +  + ++D      ++ 
Sbjct: 128 YIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIFV 164


>gi|114550694|ref|XP_001151905.1| PREDICTED: hypothetical protein LOC457233 isoform 5 [Pan
           troglodytes]
          Length = 460

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D +   I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDVNTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYKRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACLQGITF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + +   +     R             W+P G ++A    +  
Sbjct: 142 TRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-VWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKD 411
           ++ I +   DG   RLL   S  +      +  WSPS + L       
Sbjct: 201 EYKILLYSLDG---RLLSTYSAYEWSLGIKSVAWSPSSQFLAVGSYDG 245



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 9/157 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK     VQ      +   D+ +    +L   L       +S DS  I+    + G
Sbjct: 16  FSPDGKYLASCVQ----YRLVVRDVNTLQILQLYTCLDQIQHIEWSADSLFILCAMYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++    +      +  A      WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSVS 127

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +       Q  T++  GR +  + ++D      ++ 
Sbjct: 128 YIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIFV 164


>gi|114550696|ref|XP_001151838.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
          Length = 453

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D +   I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDVNTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYKRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACLQGITF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + +   +     R             W+P G ++A    +  
Sbjct: 142 TRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-VWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKD 411
           ++ I +   DG   RLL   S  +      +  WSPS + L       
Sbjct: 201 EYKILLYSLDG---RLLSTYSAYEWSLGIKSVAWSPSSQFLAVGSYDG 245



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 9/157 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK     VQ      +   D+ +    +L   L       +S DS  I+    + G
Sbjct: 16  FSPDGKYLASCVQ----YRLVVRDVNTLQILQLYTCLDQIQHIEWSADSLFILCAMYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++    +      +  A      WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSVS 127

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +       Q  T++  GR +  + ++D      ++ 
Sbjct: 128 YIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIFV 164


>gi|114550702|ref|XP_513739.2| PREDICTED: similar to WDR8 protein isoform 6 [Pan troglodytes]
          Length = 435

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D +   I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDVNTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYKRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACLQGITF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + +   +     R             W+P G ++A    +  
Sbjct: 142 TRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-VWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKD 411
           ++ I +   DG   RLL   S  +      +  WSPS + L       
Sbjct: 201 EYKILLYSLDG---RLLSTYSAYEWSLGIKSVAWSPSSQFLAVGSYDG 245



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 9/157 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK     VQ      +   D+ +    +L   L       +S DS  I+    + G
Sbjct: 16  FSPDGKYLASCVQ----YRLVVRDVNTLQILQLYTCLDQIQHIEWSADSLFILCAMYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++    +      +  A      WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSVS 127

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +       Q  T++  GR +  + ++D      ++ 
Sbjct: 128 YIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIFV 164


>gi|55960627|emb|CAI14336.1| WD repeat domain 8 [Homo sapiens]
 gi|56204461|emb|CAI19129.1| WD repeat domain 8 [Homo sapiens]
 gi|119591867|gb|EAW71461.1| WD repeat domain 8, isoform CRA_c [Homo sapiens]
 gi|312151788|gb|ADQ32406.1| WD repeat domain 8 [synthetic construct]
          Length = 435

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D +   I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDVNTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYKRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACLQGITF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + +   +     R             W+P G ++A    +  
Sbjct: 142 TRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-VWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKD 411
           ++ I +   DG   RLL   S  +      +  WSPS + L       
Sbjct: 201 EYKILLYSLDG---RLLSTYSAYEWSLGIKSVAWSPSSQFLAVGSYDG 245



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 9/157 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK     VQ      +   D+ +    +L   L       +S DS  I+    + G
Sbjct: 16  FSPDGKYLASCVQ----YRLVVRDVNTLQILQLYTCLDQIQHIEWSADSLFILCAMYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++    +      +  A      WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSVS 127

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +       Q  T++  GR +  + ++D      ++ 
Sbjct: 128 YIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIFV 164


>gi|7020525|dbj|BAA91164.1| unnamed protein product [Homo sapiens]
          Length = 460

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D +   I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDVNTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYKRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACLQGITF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + +   +     R             W+P G ++A    +  
Sbjct: 142 TRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-VWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKD 411
           ++ I +   DG   RLL   S  +      +  WSPS + L       
Sbjct: 201 EYKILLYSLDG---RLLSTYSAYEWSLGIKSVAWSPSSQFLAVGSYDG 245



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 9/157 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK     VQ      +   D+ +    +L   L       +S DS  I+    + G
Sbjct: 16  FSPDGKYLASCVQ----YRLVVRDVNTLQILQLYTCLDQIQHIEWSADSLFILCAMYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++    +      +  A      WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSVS 127

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +       Q  T++  GR +  + ++D      ++ 
Sbjct: 128 YIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIFV 164


>gi|224586777|ref|NP_060288.3| WD repeat-containing protein 8 [Homo sapiens]
 gi|17380347|sp|Q9P2S5|WDR8_HUMAN RecName: Full=WD repeat-containing protein 8
 gi|7209723|dbj|BAA92312.1| unnamed protein product [Homo sapiens]
 gi|55562684|gb|AAH86311.1| WD repeat domain 8 [Homo sapiens]
 gi|55960626|emb|CAI14335.1| WD repeat domain 8 [Homo sapiens]
 gi|56204460|emb|CAI19128.1| WD repeat domain 8 [Homo sapiens]
 gi|119591866|gb|EAW71460.1| WD repeat domain 8, isoform CRA_b [Homo sapiens]
          Length = 460

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D +   I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDVNTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYKRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACLQGITF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + +   +     R             W+P G ++A    +  
Sbjct: 142 TRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-VWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKD 411
           ++ I +   DG   RLL   S  +      +  WSPS + L       
Sbjct: 201 EYKILLYSLDG---RLLSTYSAYEWSLGIKSVAWSPSSQFLAVGSYDG 245



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 9/157 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK     VQ      +   D+ +    +L   L       +S DS  I+    + G
Sbjct: 16  FSPDGKYLASCVQ----YRLVVRDVNTLQILQLYTCLDQIQHIEWSADSLFILCAMYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++    +      +  A      WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSVS 127

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +       Q  T++  GR +  + ++D      ++ 
Sbjct: 128 YIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIFV 164


>gi|322705180|gb|EFY96768.1| wd40 protein, putative [Metarhizium anisopliae ARSEF 23]
          Length = 1529

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 67/213 (31%), Gaps = 11/213 (5%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-P 263
               P  D     P FS +   +     +     R+   +         + ++ S+     
Sbjct: 964  RTLPGGDDWPQRPFFSHDSLLLITVHRETIRTWRIDTGECIQKVYVHDLESWDSVSWDLA 1023

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF--INISA-SYSPDSSQIVFE 319
              S + +      ++   ++I+    ++    R L   +   +  S  ++S DS+Q+   
Sbjct: 1024 TLSHDARLLACPAKRGGKINIWC--AKTWKLRRVLLCHMDERVVTSPLAFSHDSAQLASG 1081

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKK 378
            S+ +G   + V   N  +  RI        F   +S    +I            I     
Sbjct: 1082 SN-DGS--IRVWSVNTGECMRILNGHLEPIFWVAFSHDSTMILSISTPLDTILRIWHTNS 1138

Query: 379  DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                + L      +    +SP  R ++    +D
Sbjct: 1139 SERVQVLEHHKGQVLGLIFSPDSRLIVTKAIRD 1171



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 102/290 (35%), Gaps = 40/290 (13%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS-GIIKNSL 193
            D + ++      +  +WR +                 D+  R  F  +S++   + + ++
Sbjct: 947  DGELLLTVSTAGTVRAWRTL-------------PGGDDWPQRPFFSHDSLLLITVHRETI 993

Query: 194  CVMDRDGANIRYLTPSRDQILFEP-RF-----SPNQQKVAYATYDDEDILRVYLMDTRID 247
                 D           D   ++   +     S + + +A      +   ++ +   +  
Sbjct: 994  RTWRIDTGECIQKVYVHDLESWDSVSWDLATLSHDARLLA---CPAKRGGKINIWCAKTW 1050

Query: 248  RAPKRIGNF--RSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +  + +       ++ +P  FS +  +   S   D ++ ++SV+  +    R+ N    +
Sbjct: 1051 KLRRVLLCHMDERVVTSPLAFSHDSAQLA-SGSNDGSIRVWSVN--TGECMRILNG---H 1104

Query: 305  ISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +      ++S DS+ I+  S       L +  +N S++ ++ +  +      ++SP   L
Sbjct: 1105 LEPIFWVAFSHDSTMILSISTPL-DTILRIWHTNSSERVQVLEHHKGQVLGLIFSPDSRL 1163

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
            I           I V   +  +   L    + +++  +SP    L  +  
Sbjct: 1164 IVTKAIRDT--HILVWNTENGESHALRGHQALIRSAVFSPDSALLASASD 1211


>gi|281341830|gb|EFB17414.1| hypothetical protein PANDA_012441 [Ailuropoda melanoleuca]
          Length = 545

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 66/198 (33%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  DD     + + +      P      +  + A  +       L    
Sbjct: 158 AWHPHTNKFAVALLDD----SIRVYNASSTIVPSLKHRLQRNVAALAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QT-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIL 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  +         F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVL-AATPSAVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGSRLLFT 346



 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 61/209 (29%), Gaps = 42/209 (20%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V D        L   R   +    +SP+  KV  AT     + RV+          +R
Sbjct: 269 ILVWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVLAAT--PSAVFRVWEAQMWT---CER 323

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                       +S +G R L +V       IYS+       ER                
Sbjct: 324 WPTLSGRCQTGCWSPDGSRLLFTVL--GEPLIYSLSF----PERCGEGKG---------- 367

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDLIAFTKFSG 368
                    R G  +   + ++ S+    + D E          VW P G+ +A      
Sbjct: 368 ---------RVGGAKSATIVADLSETTVQTPDGEERLGGEAHSMVWDPSGERLAVLMKGN 418

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +        DG    LL    N  +P +
Sbjct: 419 PRVQ------DGKPVILLFRTRN--SPVF 439


>gi|170084215|ref|XP_001873331.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164650883|gb|EDR15123.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 478

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 90/256 (35%), Gaps = 22/256 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           +R   V  S        S+    +  ++    TP  D  +    +S + +   Y      
Sbjct: 42  TRTWLVDASPSPPQAALSVLKSKQKASSSSSATPQIDSWITHAGWSSDSE---YILAACT 98

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               V+L+  R +    RI +    ++   ++ +G+  +   +    + ++S  L + + 
Sbjct: 99  KRGVVHLLKLRDEEWSGRIDSGAEGLVKAEWAPDGRTVVCFSEWGLRVSMWS--LTTGSA 156

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPV 353
             +     I+   ++  D    V     + K+ + V +++ +    R      +      
Sbjct: 157 TYIQFPTHIDRGYAFRSDGRYFVLAERHKSKDTIGVYEASAAYKLVRHFPLPTSFVSSLA 216

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-------TWSPSGRSLIF 406
            SP G+ IA       ++ + ++   G    +L   S    P       +W PSG  L+ 
Sbjct: 217 LSPTGNHIA-VWEGPLEYKLYILTLAGE---ILASFSPESDPGFGIRTVSWHPSGLFLVV 272

Query: 407 SRKKDGDTGSKLYSID 422
                G    K+Y +D
Sbjct: 273 -----GGYDDKIYVLD 283


>gi|110639098|ref|YP_679307.1| peptidoglycan-associated lipoprotein [Cytophaga hutchinsonii ATCC
           33406]
 gi|110281779|gb|ABG59965.1| peptidoglycan-associated lipoprotein [Cytophaga hutchinsonii ATCC
           33406]
          Length = 673

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 65/196 (33%), Gaps = 40/196 (20%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG--SDQKRISQD 344
           VD++  +   + N+ + + +   S D   ++F S R G         NG   +   IS+ 
Sbjct: 158 VDVKIQSVSSVVNSPYSDFAPVISADEKVMIFTSRRPGSTGGS-FDENGQYYEDIYISKK 216

Query: 345 KEASYFDP----------------VWSPQG-DLIAFTKFSGEKFAIGVMKKDGSQERLL- 386
               +  P                  S  G +L  +   +         + DGS  + L 
Sbjct: 217 IAGQWGAPQNIGSNINTEFHDASIALSADGSELFIYKDDNAGDIYYCKQRADGSWSKPLP 276

Query: 387 ------VEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLN-----GRNETL---I 431
                        A   SP G +L F+  ++G  G   LY + +N     G+   L   I
Sbjct: 277 IEGSVNSRTYRENAAAVSPDGNTLFFASNREGGYGKLDLYMVKMNDKGFWGKPINLGPTI 336

Query: 432 NTPAYASDPQWVGFMD 447
           NT           FMD
Sbjct: 337 NTEVDDE----SPFMD 348



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/294 (13%), Positives = 87/294 (29%), Gaps = 44/294 (14%)

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK-------------- 170
           +++ RL++  + K+ + K       S   + ++   D    I+ ++              
Sbjct: 139 KIDRRLYECANGKEFMEKPVDVKIQSVSSVVNSPYSDFAPVISADEKVMIFTSRRPGSTG 198

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F+    +  +  +S  I          G+NI          L     S +  ++    
Sbjct: 199 GSFDENGQYYEDIYISKKIAGQWGAPQNIGSNINTEFHDASIAL-----SADGSELFI-- 251

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-------APRFSSNGKRALISVQKDEAM- 282
           Y D++   +Y    R D +  +       +        A   S +G     +  ++    
Sbjct: 252 YKDDNAGDIYYCKQRADGSWSKPLPIEGSVNSRTYRENAAAVSPDGNTLFFASNREGGYG 311

Query: 283 ----DIYSVDLQS--NATERL---TNTLFINISASYSPDSSQIVFESDRE---GKEQLYV 330
                +  ++ +        L    NT   + S     D   + F S      G   ++ 
Sbjct: 312 KLDLYMVKMNDKGFWGKPINLGPTINTEVDDESPFMDFDGMTLYFSSRAHKGMGGLDIFK 371

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +        +  +   P+ S   D+       G        K DG  E+
Sbjct: 372 TYYDSTKG---DWTEPINMGYPINSADDDINFVLSGDGGHGYYASAKDDGVGEK 422


>gi|315123231|ref|YP_004065237.1| peptidase S9 prolyl oligopeptidase [Pseudoalteromonas sp. SM9913]
 gi|315016991|gb|ADT70328.1| peptidase S9 prolyl oligopeptidase [Pseudoalteromonas sp. SM9913]
          Length = 682

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 10/94 (10%)

Query: 348 SYFDPVWSPQGDLIAFTKF---------SGEKF-AIGVMKKDGSQERLLVEDSNLQAPTW 397
           S      SP GD +AFT+          +G  +  + V+   G +   +    N+++  W
Sbjct: 33  SVIQTSVSPDGDNVAFTRSLPRTLYVDENGSNYSELYVVDDKGVERPFITGSVNIKSIEW 92

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           S   +++ F  K   D  + LY I ++G     +
Sbjct: 93  SNDSKTIYFLAKLKDDKFTSLYQIPVDGGQAQPV 126



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 62/199 (31%), Gaps = 44/199 (22%)

Query: 264 RFSSNGKRALISVQ----------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
             S +G     +                 ++Y VD +      +T ++ I  S  +S DS
Sbjct: 38  SVSPDGDNVAFTRSLPRTLYVDENGSNYSELYVVDDKGVERPFITGSVNIK-SIEWSNDS 96

Query: 314 SQIVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
             I F +    +    LY +  +G   + +   K+ S      SP    +A         
Sbjct: 97  KTIYFLAKLKDDKFTSLYQIPVDGGQAQPVLALKDTSISSYKLSPDNKQVA--------- 147

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR--KKDGDTGSKLYSIDLNGRNET 429
            I  M      E+ L               + L F     + G    +L+ +DL   ++ 
Sbjct: 148 -ILAMPAADKSEKEL---------------KKLGFKAEVYEMGLKNKQLFIVDLAKADKP 191

Query: 430 LINT----PAYASDPQWVG 444
           L  T      Y SD  W  
Sbjct: 192 LTPTALNVDNYVSDVNWAA 210



 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 44/309 (14%), Positives = 104/309 (33%), Gaps = 37/309 (11%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           I   +   +S+ ++    +       SL  +  DG   + +   +D  +   + SP+ ++
Sbjct: 87  IKSIEWSNDSKTIYFLAKLKDDKF-TSLYQIPVDGGQAQPVLALKDTSISSYKLSPDNKQ 145

Query: 226 VAYATYDDEDIL---------------------RVYLMDTRIDRAPKRIG--NFRSMILA 262
           VA       D                       +++++D      P      N  + +  
Sbjct: 146 VAILAMPAADKSEKELKKLGFKAEVYEMGLKNKQLFIVDLAKADKPLTPTALNVDNYVSD 205

Query: 263 PRFSSNGKRALISVQKDEAMDI-------YSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             +++NG++ L+  Q    +D        +  D+ SN       T      A  S D   
Sbjct: 206 VNWAANGEKLLVKTQPTALIDDKYTKSMWHLFDIASNKVTLSFKTEGKLGDAELSHDGKY 265

Query: 316 IVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           I      +       +L++  +  ++      D      D  WS + + + F    G + 
Sbjct: 266 IAILGAEDKHDPATGRLFIADTKTAEITEWLPDFMGHVVDFEWSHKRNTLNFIANVGTQS 325

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWS-PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +  +K   ++ + LV +    A   S       +  R       ++++ +  N +   L
Sbjct: 326 FVASIKTGSNKYKKLVNEGEFIASQLSVSDSDKTLALRGNTAKHPNEVFIVRSN-KATRL 384

Query: 431 INTPAYASD 439
            ++ ++ +D
Sbjct: 385 TDSNSWLND 393


>gi|330928657|ref|XP_003302351.1| hypothetical protein PTT_14125 [Pyrenophora teres f. teres 0-1]
 gi|311322362|gb|EFQ89558.1| hypothetical protein PTT_14125 [Pyrenophora teres f. teres 0-1]
          Length = 793

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 51/143 (35%), Gaps = 24/143 (16%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMK 377
           K  L  M    +  +   Q   ++  D   S  G ++AF   S +          I V+ 
Sbjct: 287 KNLLSGMNYTVTRPESPVQGSSSNSGDYDLSADGSMVAFRTKSPDLPKANYTASYIYVVP 346

Query: 378 KDGSQERLL----------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGS---KLYSIDLN 424
            DGS   +                  AP WS  G  L ++++   D  S   KLY  D++
Sbjct: 347 FDGSAVAVPINGPGTTAPETAQGASGAPVWSHDGSKLAYTQQDGIDYESDKYKLYVADMD 406

Query: 425 GRNETLINTP-AYASDP---QWV 443
           G N  + +    + S P   +W 
Sbjct: 407 GMNSQVRSVAEDWDSSPTGLKWS 429



 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 26/234 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---------ATYDDEDI 236
           +G +KN L  M+                  +   S +   VA+         A Y    I
Sbjct: 283 AGELKNLLSGMNYTVTRPESPVQGSSSNSGDYDLSADGSMVAFRTKSPDLPKANYTASYI 342

Query: 237 LRVYLMDTRI-----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-----EAMDIYS 286
             V    + +               +    AP +S +G +   + Q       +   +Y 
Sbjct: 343 YVVPFDGSAVAVPINGPGTTAPETAQGASGAPVWSHDGSKLAYTQQDGIDYESDKYKLYV 402

Query: 287 VDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS- 342
            D+    ++  +     + S +   +S D++ +   S+     +L+ +  + +   + + 
Sbjct: 403 ADMDGMNSQVRSVAEDWDSSPTGLKWSSDNANLWVTSELHASVRLWAVPQDAAADFKPTN 462

Query: 343 -QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
               E    D    P G   AF   +    +    K+   QE+ ++  +N   P
Sbjct: 463 ITGPETYLSDFDILPDGS--AFVSAAASWTSRMFYKQKSGQEKKVLFSANEVDP 514


>gi|307152063|ref|YP_003887447.1| heat shock protein DnaJ domain-containing protein [Cyanothece sp.
           PCC 7822]
 gi|306982291|gb|ADN14172.1| heat shock protein DnaJ domain protein [Cyanothece sp. PCC 7822]
          Length = 630

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 77/229 (33%), Gaps = 10/229 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDT 244
           SG    ++ + +       Y        +    FSP+ + +    +D      ++     
Sbjct: 289 SGSNDQTVKLWNLTTGKPIYTFFGLGGEVQTVAFSPDGEMIIAGGFDQRISAWKLATKQI 348

Query: 245 RIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
                  +   +    I +  F+ N ++++IS   D  + I+     +   +R L     
Sbjct: 349 FSAFFSLRSYQSHEGAIFSLAFTHN-RQSIISASGDHKLKIWG--GFTGQWKRTLNGHSD 405

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I  S + +PDS  +V  S     + + + +          Q           SP G  + 
Sbjct: 406 IVWSIAITPDSQMLVSGS---ADKTIGIWELESYKPPHFLQGHSGEVTAIAISPSGKFMI 462

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            +  +     I  +      + L    +++ +   SP G +L+ +  ++
Sbjct: 463 -SGSTDTTIKIWHLPTGELLKTLKGHTNSVLSLAISPDGETLVSASYQE 510



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/331 (15%), Positives = 109/331 (32%), Gaps = 43/331 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G +   V  +LW++   K I    FF      + +A   S D         G F
Sbjct: 284 GQTLMSGSNDQTV--KLWNLTTGKPIY--TFFGLGGEVQTVA--FSPD---GEMIIAGGF 334

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + RI            K +   +     ++R    S +  +F   F+ N+Q +  A+ D 
Sbjct: 335 DQRIS---------AWKLATKQIFSAFFSLRS-YQSHEGAIFSLAFTHNRQSIISASGDH 384

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +    + +      +  + +     ++ +   + +  + L+S   D+ + I+ ++     
Sbjct: 385 K----LKIWGGFTGQWKRTLNGHSDIVWSIAITPD-SQMLVSGSADKTIGIWELE-SYKP 438

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              L        + + SP      F         + +      +  +  +    S     
Sbjct: 439 PHFLQGHSGEVTAIAISPSGK---FMISGSTDTTIKIWHLPTGELLKTLKGHTNSVLSLA 495

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            SP G+ +    +      I +        +LL          +SP G+ LI      G 
Sbjct: 496 ISPDGETLVSASYQ----EIKLWCLSTK--KLLQNLCGCSPIVFSPDGKILI-----SGG 544

Query: 414 TGSKL--YSIDLNGRNETLINTPAYASDPQW 442
            G+ +  + + L   +E  I     + +  W
Sbjct: 545 YGNSIKVWYLTLGMISEQPITDVVNSGE--W 573



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/172 (12%), Positives = 54/172 (31%), Gaps = 20/172 (11%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +    + +  S I A   S +G+   +S   D+ + ++  +L +         L  
Sbjct: 259 IAHWQCGYILQDHPSKINAIAISPDGQTL-MSGSNDQTVKLW--NLTTGKPIYTFFGLGG 315

Query: 304 NISA-SYSPDSSQIVFESDREG-KEQLYVMQSNGSD------QKRISQDKEASYFDPVWS 355
            +   ++SPD   I+      G  +++   +             R  Q  E + F   ++
Sbjct: 316 EVQTVAFSPDGEMII----AGGFDQRISAWKLATKQIFSAFFSLRSYQSHEGAIFSLAFT 371

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS--PSGRSLI 405
                I           + +      Q +  +   +    + +  P  + L+
Sbjct: 372 HNRQSIISAS---GDHKLKIWGGFTGQWKRTLNGHSDIVWSIAITPDSQMLV 420


>gi|154285238|ref|XP_001543414.1| periodic tryptophan protein 2 [Ajellomyces capsulatus NAm1]
 gi|150407055|gb|EDN02596.1| periodic tryptophan protein 2 [Ajellomyces capsulatus NAm1]
          Length = 935

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 75/211 (35%), Gaps = 16/211 (7%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + + +A+ +     +L V+   +      K+ G+  SM     +S +G++  I+   D 
Sbjct: 327 NSGEWIAFGSSKLGQLL-VWEWQSE-SYILKQQGHLDSMNSL-VYSPDGQKI-ITAADDG 382

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + ++  +         T       +  +S   + ++F +  +G  + + +     + + 
Sbjct: 383 RIKVWDTN-SGFCIVTFTEHTSGVTACQFSKKGN-VLFTASLDGSIRAWDL-IRYRNFRT 439

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWS 398
            +      +      P G+++         F + +      Q   RL      + + ++S
Sbjct: 440 YTAPSRLGFSCLAVDPSGEVVCAGSLD--SFDVHIWSVQTGQLLDRLAGHQGPVSSLSFS 497

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             GR L+      G     +    + GR +T
Sbjct: 498 ADGRHLV-----SGSWDHTIRIWSIFGRTQT 523



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 60/190 (31%), Gaps = 8/190 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ QK+  A  D     R+ + DT             S + A +FS  G   L +   
Sbjct: 368 YSPDGQKIITAADDG----RIKVWDTNSGFCIVTFTEHTSGVTACQFSKKGN-VLFTASL 422

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++       T    +  S   + D S  V  +       +++        
Sbjct: 423 DGSIRAWDL-IRYRNFRTYTAPSRLGFS-CLAVDPSGEVVCAGSLDSFDVHIWSVQTGQL 480

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                  +       +S  G  +    +      I  +         L   ++L +  + 
Sbjct: 481 LDRLAGHQGPVSSLSFSADGRHLVSGSWDHT-IRIWSIFGRTQTSEPLELQADLLSVAFR 539

Query: 399 PSGRSLIFSR 408
           P G+ +  S 
Sbjct: 540 PDGKQIAASS 549



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 63/167 (37%), Gaps = 24/167 (14%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D   V++   +  +   R+   +  + +  FS++G+  + S   D  + I+S+  ++  +
Sbjct: 466 DSFDVHIWSVQTGQLLDRLAGHQGPVSSLSFSADGRHLV-SGSWDHTIRIWSIFGRTQTS 524

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM-----------QSNGSDQKRISQ 343
           E L       +S ++ PD  QI   S  +G+   + +           + + S  ++IS 
Sbjct: 525 EPL-ELQADLLSVAFRPDGKQIA-ASSLDGQLTFWSVEEAVQEGGIDGRRDVSGGRKISD 582

Query: 344 DKEA-------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            + A       SY    +S  G  +     +G    I +        
Sbjct: 583 RRTAANAAGTKSYNTITYSADGSCLL---AAGNSKYICLYDVSTGSL 626



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 37/127 (29%), Gaps = 24/127 (18%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FS + + +   ++D      + +               ++ +L+  F 
Sbjct: 484 LAGHQGPVSSLSFSADGRHLVSGSWDH----TIRIWSIFGRTQTSEPLELQADLLSVAFR 539

Query: 267 SNGKRALISVQKDEAMDIYSV-------------DLQSNATE--RLTNTLFINISA---- 307
            +GK+   +   D  +  +SV             D+        R T        +    
Sbjct: 540 PDGKQIA-ASSLDGQLTFWSVEEAVQEGGIDGRRDVSGGRKISDRRTAANAAGTKSYNTI 598

Query: 308 SYSPDSS 314
           +YS D S
Sbjct: 599 TYSADGS 605


>gi|118100271|ref|XP_415857.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 482

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T + T       
Sbjct: 100 VTRCTSSLEGHTEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPQFTAKGHRHW 155

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQ-KRISQDKEASYFDPVW-----S 355
            +S ++SPD  ++       G    Q+++      +Q  R+            W     +
Sbjct: 156 VLSIAWSPDGKKLA-----SGCKNSQIFLWDPATGNQIGRVLTGHSKWITCLCWEPLHIN 210

Query: 356 PQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A     G    I +     G  +++L     ++    W   G  L++S  +D
Sbjct: 211 PECRYLASASKDGS---IRIWDTLMGRCDKILTGHTQSVTCVKWGGDG--LLYSSSQD 263



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 14/136 (10%)

Query: 232 DDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L     D+ P +R+   +++I    FS +  R + S   D+++ ++    +
Sbjct: 343 SGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPD-TRIIASASFDKSIKLW----E 397

Query: 291 SNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
               + LT+    ++SA    ++S DS  +V  S       L V  +             
Sbjct: 398 GRTGKYLTSLRG-HVSAVYQIAWSADSRLLVSGSS---DSTLKVWDAETKKLAIDLPGHA 453

Query: 347 ASYFDPVWSPQGDLIA 362
              F   WSP G  +A
Sbjct: 454 DEVFATDWSPDGQRVA 469



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 34/107 (31%), Gaps = 12/107 (11%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            A  R T++L  +  A    ++SP    +   S   G   +     +    +  ++    
Sbjct: 98  RAVTRCTSSLEGHTEAVISVAFSPTGKYLASGS---GDTTVRFWDLSTETPQFTAKGHRH 154

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNL 392
                 WSP G  +A      +   I +       +  R+L   S  
Sbjct: 155 WVLSIAWSPDGKKLA---SGCKNSQIFLWDPATGNQIGRVLTGHSKW 198



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 45/139 (32%), Gaps = 8/139 (5%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++         ER+T    +     +SPD+  I   S     + +
Sbjct: 337 GPERLVSGSDDFTLFLWRPAEDKKPLERMTGHQALINQVLFSPDTRIIASASF---DKSI 393

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            + +          +   ++ +   WS    L+           + V   +  +  + + 
Sbjct: 394 KLWEGRTGKYLTSLRGHVSAVYQIAWSADSRLLVSGSSDST---LKVWDAETKKLAIDLP 450

Query: 389 DSNLQAPT--WSPSGRSLI 405
               +     WSP G+ + 
Sbjct: 451 GHADEVFATDWSPDGQRVA 469



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 54/178 (30%), Gaps = 16/178 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D      ++        +    +SP+ +K+A          +++L D  
Sbjct: 128 SGSGDTTVRFWDLSTETPQFTAKGHRHWVLSIAWSPDGKKLA----SGCKNSQIFLWDPA 183

Query: 246 ID-RAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
              +  + +      I    +     +   +    S  KD ++ I+   L     + LT 
Sbjct: 184 TGNQIGRVLTGHSKWITCLCWEPLHINPECRYLA-SASKDGSIRIWDT-LMGRCDKILTG 241

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                    +  D   +++ S ++    + V +S      R  Q           S  
Sbjct: 242 HTQSVTCVKWGGDG--LLYSSSQD--RTIKVWRSQDGILCRTLQGHAHWVNTMALSTD 295


>gi|94501758|ref|ZP_01308271.1| hypothetical protein RED65_07479 [Oceanobacter sp. RED65]
 gi|94426066|gb|EAT11061.1| hypothetical protein RED65_07479 [Oceanobacter sp. RED65]
          Length = 445

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 20/146 (13%)

Query: 264 RFSSNGKRALISVQKD---EAMDIYSVDLQSNATERLT-----NTLFINISASYSPDSSQ 315
             SS+G+  L +          +++  D +    +R+           ++S +Y+ D  +
Sbjct: 107 SVSSDGRYLLFTAHGGSDVHTWNLFEYDFEEKTVKRIFEEDDVANAGHDVSPTYTND-DK 165

Query: 316 IVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSP-------QGDLIAFTKF 366
           IVF S+R    +  LY +  +G D K +  + E++   P+           G LI F   
Sbjct: 166 IVFSSNRGTGSEFVLYTVSRDGEDLKALL-ETESARSAPIGHQVEARNLKDGTLI-FKGQ 223

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNL 392
           S  +  +  ++ +G Q + L +D N 
Sbjct: 224 SATQQNVHSIQPNGEQLKSLYQDVNN 249



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 46/119 (38%), Gaps = 11/119 (9%)

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVE 388
            ++ ++      +      D   S  G  + FT   G     + +     +    + + E
Sbjct: 86  DASDTEILSTVFNGAYDVKDLSVSSDGRYLLFTAHGGSDVHTWNLFEYDFEEKTVKRIFE 145

Query: 389 D------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDP 440
           +       +  +PT++   + ++FS  +   +   LY++  +G + + L+ T +  S P
Sbjct: 146 EDDVANAGHDVSPTYTNDDK-IVFSSNRGTGSEFVLYTVSRDGEDLKALLETESARSAP 203


>gi|11499951|ref|NP_071197.1| hypothetical protein AF2374 [Archaeoglobus fulgidus DSM 4304]
 gi|2650726|gb|AAB91295.1| predicted coding region AF_2374 [Archaeoglobus fulgidus DSM 4304]
          Length = 157

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 7/62 (11%)

Query: 268 NGKRALISVQKDEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-S 320
           +G + + S   D +        ++ +DL++    R+T  ++ +   + SP+ S+I F  S
Sbjct: 93  DGTKIVFSKHTDGSYATHWDEKVFLMDLETKQVTRVTRNIYFDSYPTISPEGSKIAFVES 152

Query: 321 DR 322
           +R
Sbjct: 153 ER 154



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP-----DSSQIVFESDRE 323
           G      + K     +  + L + A E  +    ++  + + P     D ++IVF    +
Sbjct: 45  GYTVTYHLDKVRNTAVSLIFLTTAAAEEWSFVKLVDDPSHFGPGGMTADGTKIVFSKHTD 104

Query: 324 GKE------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           G        ++++M        R++++       P  SP+G  IAF +    +F
Sbjct: 105 GSYATHWDEKVFLMDLETKQVTRVTRN-IYFDSYPTISPEGSKIAFVESERLQF 157



 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 7/74 (9%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQA-PT 396
           D  + +     +  G  I F+K +   +       + +M  +  Q   +  +    + PT
Sbjct: 80  DDPSHFGPGGMTADGTKIVFSKHTDGSYATHWDEKVFLMDLETKQVTRVTRNIYFDSYPT 139

Query: 397 WSPSGRSLIFSRKK 410
            SP G  + F   +
Sbjct: 140 ISPEGSKIAFVESE 153


>gi|120603750|ref|YP_968150.1| hypothetical protein Dvul_2712 [Desulfovibrio vulgaris DP4]
 gi|120563979|gb|ABM29723.1| conserved hypothetical protein [Desulfovibrio vulgaris DP4]
          Length = 418

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 77/249 (30%), Gaps = 31/249 (12%)

Query: 175 SRILFVSESVVSGIIKNSLC--VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + +       V+  ++ SL    +  DG       P     ++EP F P    VA     
Sbjct: 194 TPVFDTHGRRVAAQVRLSLYDYTIAVDGEPWPVTFP----CVWEPVFDPATGSVAAPVRK 249

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           D            +D       NF      PRFS +G+R    V  D      + D    
Sbjct: 250 DGR------WGMALDGNLIWPANFF-QCWHPRFSPDGRRLWAIVAPDYGSFTVACDG--- 299

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-YFD 351
                 N   +      SPD S+     + +      ++          +   E    + 
Sbjct: 300 --IPWGNRFPVVSDLVLSPDGSRAAAVGNHDNTRFSVIVDDK-------AWPGEWDMVWA 350

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           PV+S  G  +A     G+ F   V   DG   R     S    P + P G  L+    ++
Sbjct: 351 PVFSADGAHVAVKARKGDTFHFIV---DGKPWRE--GFSQAGTPVFGPDGDRLLMCGVQN 405

Query: 412 GDTGSKLYS 420
           G     + +
Sbjct: 406 GAAVRHIVA 414


>gi|301775783|ref|XP_002923300.1| PREDICTED: aladin-like isoform 1 [Ailuropoda melanoleuca]
          Length = 546

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 66/198 (33%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  DD     + + +      P      +  + A  +       L    
Sbjct: 158 AWHPHTNKFAVALLDD----SIRVYNASSTIVPSLKHRLQRNVAALAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QT-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIL 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  +         F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVL-AATPSAVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGSRLLFT 346



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 61/209 (29%), Gaps = 42/209 (20%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V D        L   R   +    +SP+  KV  AT     + RV+          +R
Sbjct: 269 ILVWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVLAAT--PSAVFRVWEAQMWT---CER 323

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                       +S +G R L +V       IYS+       ER                
Sbjct: 324 WPTLSGRCQTGCWSPDGSRLLFTVL--GEPLIYSLSF----PERCGEGKG---------- 367

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDLIAFTKFSG 368
                    R G  +   + ++ S+    + D E          VW P G+ +A      
Sbjct: 368 ---------RVGGAKSATIVADLSETTVQTPDGEERLGGEAHSMVWDPSGERLAVLMKGN 418

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +        DG    LL    N  +P +
Sbjct: 419 PRVQ------DGKPVILLFRTRN--SPVF 439


>gi|304315686|ref|YP_003850831.1| hypothetical protein Tthe_0159 [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777188|gb|ADL67747.1| WD40 domain protein beta Propeller [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 268

 Score = 51.9 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 64/178 (35%), Gaps = 30/178 (16%)

Query: 264 RFSSNGKRAL---ISVQKD--EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            +  + +  L   ++  KD     +I  +++++N  + L +    +     + D+    +
Sbjct: 8   SWFPDNQNLLLVRMTRNKDLNSNQEICILNIKNNKLKHLVSGGEWDGVG-LTDDNKIKYY 66

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDK---EASYFDPVWSPQGDLIAFTKFSGEK----- 370
            S  E  + +  M+  G     I +        +  P  SP G  I ++           
Sbjct: 67  MSQEELNKLI--MKYGGPKTIPIEKVGTKLFVRFSSPSISPDGSKIVYSATLYRNQADEG 124

Query: 371 --------FAIGVMKK-DGSQERL-----LVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                    +I ++   D S +R+     +   S +   TWS  G+ L+F R +  + 
Sbjct: 125 DPIRLWLASSIWMIDLKDDSLKRIYSDQEVSNGSAIGHVTWSSDGKRLVFYRYRGSNG 182



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 65/193 (33%), Gaps = 33/193 (17%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-FRSMILAPRFSSNGKRALISV---- 276
           +  K+ Y    +E    +           +++G        +P  S +G + + S     
Sbjct: 59  DDNKIKYYMSQEELNKLIMKYGGPKTIPIEKVGTKLFVRFSSPSISPDGSKIVYSATLYR 118

Query: 277 -QKDEAM--------DIYSVDLQSNATERL------TNTLFINISASYSPDSSQIVFESD 321
            Q DE           I+ +DL+ ++ +R+      +N   I    ++S D  ++VF   
Sbjct: 119 NQADEGDPIRLWLASSIWMIDLKDDSLKRIYSDQEVSNGSAI-GHVTWSSDGKRLVFYRY 177

Query: 322 R---EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ---GDLIAFTKF----SGEKF 371
           R       +L  +       K I    E +Y +   SP     + I+F       S E  
Sbjct: 178 RGSNGSNGRLDCLDLKSIKVKTIVPVTEENYTN--ISPHSLPNNNISFISVSKQGSPENA 235

Query: 372 AIGVMKKDGSQER 384
              ++       +
Sbjct: 236 KQYIVNLKTGSIK 248



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 53/149 (35%), Gaps = 27/149 (18%)

Query: 217 PRFSPNQQKVAYATYDDED------------ILRVYLMDTRIDRAPKRIGNFRSMILAP- 263
           P  SP+  K+ Y+     +               ++++D + D   +   +      +  
Sbjct: 101 PSISPDGSKIVYSATLYRNQADEGDPIRLWLASSIWMIDLKDDSLKRIYSDQEVSNGSAI 160

Query: 264 ---RFSSNGKRALISVQKDEAMDIYSVD------LQSNATERLTNTLFINISASYSPDSS 314
               +SS+GKR +    +        +D      ++      +T   + NIS    P+++
Sbjct: 161 GHVTWSSDGKRLVFYRYRGSNGSNGRLDCLDLKSIKVKTIVPVTEENYTNISPHSLPNNN 220

Query: 315 QIVFES-DREGKEQ---LYVMQSNGSDQK 339
            I F S  ++G  +    Y++       K
Sbjct: 221 -ISFISVSKQGSPENAKQYIVNLKTGSIK 248


>gi|171914669|ref|ZP_02930139.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Verrucomicrobium spinosum DSM 4136]
          Length = 775

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 57/160 (35%), Gaps = 16/160 (10%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERL---TNTLFINISA---- 307
               L  R+S NG     +  +       I +V+  + A   +   T+  FI+ +     
Sbjct: 318 EGPDLDVRWSENGDEFYFNYNQRGHQLYRILAVNATTGAVRTVVEETSKTFIDYTNKTYR 377

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAF--- 363
            +     ++++ S+R+G   L++  +     K ++++                 + F   
Sbjct: 378 EWLKGMGELLWTSERDGWCHLWLYDAATGQPKLQVTKGPWVVRKVEHVDAVKRQVWFMAG 437

Query: 364 -TKFSGEKFAIGV--MKKDGSQERLLVEDSNLQAPTWSPS 400
             +   + + + +  +  DG+    L E       T+SP 
Sbjct: 438 GVRPEEDPYHLHLCRVNLDGTGFVRLTEGDGTHKITFSPD 477



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 69/230 (30%), Gaps = 50/230 (21%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA--- 272
            P +  +  +  Y+     +     L+D+      +     +          NG+     
Sbjct: 43  RPHWLEDGHQFWYSVSTGPESKEFVLVDSVTGTVQRAATLEKLG-----LPPNGREVDMP 97

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP-DSSQIVFESDREG------- 324
           +I   +      +          R+ N     +   +S  D  +  +   + G       
Sbjct: 98  VIRGTRSTGPKCHL---------RVLNQTKEPVELFWSDFDGQRRSYGRIQAGDARELET 148

Query: 325 -KEQLYVMQSNGSDQKRISQDKEASYF-------------------DPVWSPQGDL-IAF 363
               ++V+ +      R  + +E +                     DP  SP     + F
Sbjct: 149 FAGHVWVVVNALGKPLRAFEAREGTLEVTVDGTGEPPKDPRTEKREDPRLSPDKKWRVEF 208

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPT-WSPSGRSLIFSRKKD 411
                + + + +   + S+  L  ED +    P  WSP  R ++F R+ +
Sbjct: 209 --RDDQPYLVNLENNEASKLELPAEDKTRCSGPVQWSPDSRHVVFMRQHE 256


>gi|170076658|ref|YP_001733296.1| WD repeat-containing protein [Synechococcus sp. PCC 7002]
 gi|169884327|gb|ACA98040.1| WD-repeat protein [Synechococcus sp. PCC 7002]
          Length = 1386

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 44/286 (15%), Positives = 88/286 (30%), Gaps = 56/286 (19%)

Query: 158  ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
             S +   ++    GD  +    V  +  S +  +   ++       +   P R     + 
Sbjct: 1041 FSQNFIPAVFRPPGDRQTMTPDVPITDFSFVGNSFQLLL------AQPNQPLRQWPNQDQ 1094

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-------IGNFRSMILAPRFSSNGK 270
              SPN + +    +       V   D R  +  +R       +G F+  I    +S +GK
Sbjct: 1095 TLSPNNESITSLAWQPRGHFFVTGGDDRRVKLRQRNGQILQTLGGFQDKINVVAWSRDGK 1154

Query: 271  RALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
                +  +D+ + +++   ++    + LT       +  +SPD   +   +  +   Q++
Sbjct: 1155 MFA-AGSQDQTVRLWT---ETGELLQILTEHRGPITALQFSPDGKLLA-TAASDHTVQIW 1209

Query: 330  --------------------VMQ-----------SNGSDQKRISQDKEASYFDPVWSPQG 358
                                +M              G D +           +PV+   G
Sbjct: 1210 QRRRNNSFFLVTQFPPFATEIMDLQFGADSRHLGLTGRDHQVFVYPMTYENNNPVF---G 1266

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            + IA    S     IG     G+   L+    N     W   G  L
Sbjct: 1267 EPIAINHQSNGPDRIGFY---GALPLLITNTENHHLQFWQLDGTYL 1309



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 22/142 (15%), Positives = 47/142 (33%), Gaps = 12/142 (8%)

Query: 299  NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            N   I  S ++ P     V      G ++   ++       +     +       WS  G
Sbjct: 1099 NNESI-TSLAWQPRGHFFV----TGGDDRRVKLRQRNGQILQTLGGFQDKINVVAWSRDG 1153

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             + A          + +  + G   ++L E    + A  +SP G+ L  +     D   +
Sbjct: 1154 KMFAAGSQDQT---VRLWTETGELLQILTEHRGPITALQFSPDGKLLATAAS---DHTVQ 1207

Query: 418  LYSIDLNGRNETLINTPAYASD 439
            ++    N     +   P +A++
Sbjct: 1208 IWQRRRNNSFFLVTQFPPFATE 1229


>gi|163753662|ref|ZP_02160785.1| hypothetical protein KAOT1_18607 [Kordia algicida OT-1]
 gi|161325876|gb|EDP97202.1| hypothetical protein KAOT1_18607 [Kordia algicida OT-1]
          Length = 304

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 103/291 (35%), Gaps = 28/291 (9%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           A + SD+ Y    G           + E V S I       +D D  +      S     
Sbjct: 12  ADSSSDENYHD--GRPCFSPDGKTVLFERVGSTISLQEFWSVDIDTNSETLYYKSDTYAC 69

Query: 215 FEPRFSPN----QQKVAYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRSMILAP 263
               +S N    Q ++ +     +D L +  +    D +P         IG   + +  P
Sbjct: 70  SRASWSWNPQAMQNQIVFTGVFPKDDLPMGRIMLLSDYSPNNTALRLPVIGYQNAELYYP 129

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP-DSSQIVFE--- 319
            + ++    L++   ++   +  +D+ +   E +T   F +   + +P ++  I +    
Sbjct: 130 TWYADENILLVTDYSNQQPKLLKIDIDTLHPEVVTYDGFWSGMGTVNPVNTDIIAYAGQP 189

Query: 320 -SDREGKEQLYVMQSNGSDQKRISQD---KEASYFDPVWSPQGDLIAFTKFS-GEKFAIG 374
            + +   +Q   +     + + I         +   P +S  G ++AF   S      I 
Sbjct: 190 ITSKGYNQQYNKVYLQNGNNEPILFSETIPGVNGRAPWFSNDGLVMAFESQSETTNLQIF 249

Query: 375 VMKKDGSQERL-LVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYS 420
           +   D       ++  S+ + P     +SP G  L++++  +    S+++ 
Sbjct: 250 LKSVDLENPNTPIIPVSDPEFPAQHAKFSPDGSKLVWAQNYNSKK-SQIFM 299



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 26/43 (60%)

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           E+ +   P +SP G++++F R     +  + +S+D++  +ETL
Sbjct: 18  ENYHDGRPCFSPDGKTVLFERVGSTISLQEFWSVDIDTNSETL 60


>gi|146417863|ref|XP_001484899.1| hypothetical protein PGUG_02628 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 345

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 76/233 (32%), Gaps = 23/233 (9%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V+D    ++RY+  +  + +   + SP+ + +A  +     ++RVY  +       + +
Sbjct: 18  TVVDSRLYSVRYVVQNPSESINTVKISPDGKTMATCS--SNGVIRVY--ELASGTLKQEL 73

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                 +    FS      L+S   D  + ++S+  +    + L    +   +  +    
Sbjct: 74  RGHAKGVSDVDFSPINSDILVSGSDDLTVRLWSIS-RGKCLKVLRKHTYHVTTVKFISRG 132

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKF 371
           S ++  S     E + V         R              +P   +I    + G    F
Sbjct: 133 SILLSGS---ADETITVWDLTSGKTLRTLSAHSDPILSVALTPDDTIIVSGSYDGLMRLF 189

Query: 372 AI--------GVMKKDGSQERLLVEDSNLQAP-TW---SPSGRSLIFSRKKDG 412
            +         V                +  P ++   SP+G+ ++ S   DG
Sbjct: 190 DLETGYCLKTLVYNSASQGTATASTSDVVNFPISYVNLSPNGKYIL-SSSLDG 241


>gi|21356075|ref|NP_649969.1| CG3909 [Drosophila melanogaster]
 gi|4972734|gb|AAD34762.1| unknown [Drosophila melanogaster]
 gi|7299285|gb|AAF54480.1| CG3909 [Drosophila melanogaster]
 gi|220943700|gb|ACL84393.1| CG3909-PA [synthetic construct]
 gi|220952464|gb|ACL88775.1| CG3909-PA [synthetic construct]
          Length = 331

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 85/201 (42%), Gaps = 15/201 (7%)

Query: 225 KVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           K    T   +D+++V+ L +    +   ++      +++   SS+G+    S   D  M 
Sbjct: 52  KDFLVTGGLDDLVKVWDLQEDNTLKLRHKLKGHALGVVSVAVSSDGQTIA-SSSLDSTMC 110

Query: 284 IYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++  D +S   + L +   ++  +  +SP +  ++     +GK  +Y +++  ++Q   +
Sbjct: 111 LW--DARSGDKKHLLSFGPVDLWTVQFSPCNKYVI-SGLNDGKISMYSVETGKAEQTLDA 167

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPS 400
           Q+ + +     +SP G  IA     G    I +      +    +E   +   +  +SP+
Sbjct: 168 QNGKYTL-SIAYSPDGKYIASGAIDG---IITIFDVAAGKVVQTLEGHAMPVRSLCFSPN 223

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
            + L+ +     D   KLY +
Sbjct: 224 SQLLLTASD---DGHMKLYDV 241



 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 65/185 (35%), Gaps = 20/185 (10%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   + L     +      +SP+ + +A    D      + + D    +  + +      
Sbjct: 159 GKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDG----IITIFDVAAGKVVQTLEGHAMP 214

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQI 316
           + +  FS N  + L++   D  M +Y V   D+       L+      +  ++S D    
Sbjct: 215 VRSLCFSPN-SQLLLTASDDGHMKLYDVTHSDVVGT----LSGHASWVLCVAFSEDGKHF 269

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIG 374
              S  +   +++    + S++K +    E +   +   +SP  D +A +    +   I 
Sbjct: 270 A-SSSSDNSVKIW----DTSERKCLHTFAEHTDQVWGVRYSPGNDKVA-SASEDKSLNIY 323

Query: 375 VMKKD 379
               +
Sbjct: 324 YCPPN 328


>gi|332300857|ref|YP_004442778.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
 gi|332177920|gb|AEE13610.1| OmpA/MotB domain protein [Porphyromonas asaccharolytica DSM 20707]
          Length = 665

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 65/186 (34%), Gaps = 40/186 (21%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDR--------------EGKEQLYVM--QSNGSDQK 339
           RL  + +   +  Y+PD + + F S R               G   L+++   ++G   +
Sbjct: 163 RLLISPYAEFAPCYAPDGTTLYFTSSRVPLRDMLQESEVTGLGTNNLFMIKQDASGKWSR 222

Query: 340 RISQDKEASY----FDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKD-----GSQERL 385
             S     +       P  +  G+ + +     +        I    K      G  ER+
Sbjct: 223 PDSVPGSINTAEDEGTPSITSDGNTLYYSYAEQSSTYDRTVQIYKASKSSQGGWGKGERV 282

Query: 386 LV-EDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN----GRNETL---INTPA 435
            + EDS      P    SGR L F  +  G  G  LY I L+    G+ E L   INTP 
Sbjct: 283 PIWEDSLRMAAHPAIDASGRYLYFVSEGAGLGGKDLYRIALSEHGWGKPENLGNEINTPG 342

Query: 436 YASDPQ 441
               P 
Sbjct: 343 DELFPT 348


>gi|310796266|gb|EFQ31727.1| WD domain-containing protein [Glomerella graminicola M1.001]
          Length = 494

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 204 RYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           R L   +DQ    P +S  +   +A A+ D      + + D    +    +   +    A
Sbjct: 258 RCLQTRKDQRDRRPSYSSVDSILLASASVDK----TIKVWDIATGQCLHTLHGHKKYSGA 313

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             FSS+G +   S+ +D    I+  D+ +    +         S ++S + +Q    S  
Sbjct: 314 VAFSSDGTQLA-SISRDGTARIW--DVATGKCLQTLGHDGWPCSVAFSNNGTQPALSS-- 368

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
              + + +   +    +   +  +  YF  ++
Sbjct: 369 --GDTIMIWDISTGQSRCTIRTADLGYFSQIF 398


>gi|239932725|ref|ZP_04689678.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 341

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 64/236 (27%), Gaps = 31/236 (13%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    +   +  DG   R  +         P   P +Q+  +A     D    +++   +
Sbjct: 108 GSGSVTAVPVRADGGLARSASGVFRHSGSGP--HPQRQRGPHAHQVQPDPSGRWVVGVDL 165

Query: 247 DRAPKRIGNFRSMILAP---------------RFSSNGKRALISVQKDEAMDIYSVDLQS 291
                R+       L P                F  +G  A +  +    + +   D   
Sbjct: 166 GTDSVRVCTLTGGTLRPHREFALRPGSGPRHLAFHPDGAHAYVLNELSPTLVVCRWDAAD 225

Query: 292 NATERLTN------TLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                LT           +   S    SPD  + V+ + R G++ L V    G     ++
Sbjct: 226 GELRPLTEVPVLPGAPAGDAYPSGVAVSPDG-RFVWTATR-GEDVLSVFAVEGEKLSPLT 283

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                 ++    +  G  +              +  D    R      ++  P  S
Sbjct: 284 TVPCGGHWPRAVTESGGFLYVANERSGDVTWFAVDADTGVPRR---GGSIPVPAAS 336


>gi|326918632|ref|XP_003205592.1| PREDICTED: WD repeat-containing protein 17-like [Meleagris
           gallopavo]
          Length = 1322

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 69/197 (35%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P +   +A AT  +      ++ D 
Sbjct: 412 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSISWAPGDLNCIAGATSRNGG----FIWDV 467

Query: 245 RIDRAPKRIGNF-RSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
              +   R     R+ I    +S  + KR   +   D    I ++D   N   +      
Sbjct: 468 PRGKIITRFSEHGRNGIFCIAWSHKDSKRIA-TCSDDGFCIIRTID--GNVLHKY-KHPA 523

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 524 AVFGCDWSQNNKDMIATGCEDKNVRVYYLATSSDQPLKVFTGHTAKVFHVRWSPLREGIL 583

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 584 CSGSDDGTVRIWDYTQD 600


>gi|291441082|ref|ZP_06580472.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
 gi|291343977|gb|EFE70933.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
          Length = 342

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 64/236 (27%), Gaps = 31/236 (13%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    +   +  DG   R  +         P   P +Q+  +A     D    +++   +
Sbjct: 109 GSGSVTAVPVRADGGLARSASGVFRHSGSGP--HPQRQRGPHAHQVQPDPSGRWVVGVDL 166

Query: 247 DRAPKRIGNFRSMILAP---------------RFSSNGKRALISVQKDEAMDIYSVDLQS 291
                R+       L P                F  +G  A +  +    + +   D   
Sbjct: 167 GTDSVRVCTLTGGTLRPHREFALRPGSGPRHLAFHPDGAHAYVLNELSPTLVVCRWDAAD 226

Query: 292 NATERLTN------TLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                LT           +   S    SPD  + V+ + R G++ L V    G     ++
Sbjct: 227 GELRPLTEVPVLPGAPAGDAYPSGVAVSPDG-RFVWTATR-GEDVLSVFAVEGEKLSPLT 284

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                 ++    +  G  +              +  D    R      ++  P  S
Sbjct: 285 TVPCGGHWPRAVTESGGFLYVANERSGDVTWFAVDADTGVPRR---GGSIPVPAAS 337


>gi|254571139|ref|XP_002492679.1| Subunit (90 kDa) of TFIID and SAGA complexes [Pichia pastoris
           GS115]
 gi|238032477|emb|CAY70500.1| Subunit (90 kDa) of TFIID and SAGA complexes [Pichia pastoris
           GS115]
 gi|328353313|emb|CCA39711.1| Transcription initiation factor TFIID subunit 5 [Pichia pastoris
           CBS 7435]
          Length = 722

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 68/221 (30%), Gaps = 14/221 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +   +   +    D       D    +  +R+      +    FS + +   IS  +
Sbjct: 417 WSIDGSPL--RSLLKNDPYNQQNNDGVAVKGSRRLVGHSGAVYGVDFSPDNRYL-ISCSE 473

Query: 279 DEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D+ + ++S+D  +       ++    ++   +SP        S     +   +   +   
Sbjct: 474 DKTVRLWSLDTYTCLVSYKGHSSSVWDV--KFSPMGHYFATASH---DQTARLWSCDHIY 528

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             RI            + P    + FT  S +   +  + +       +     +     
Sbjct: 529 PLRIFAGHLNDVDCVEFHPNSTYL-FTGSSDKTARMWDIARGECVRVFMGHSGAINCLAV 587

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           SP GR L        D+   L+ I   GR    +     +S
Sbjct: 588 SPDGRWLA---SAGEDSVVCLWDIS-TGRRIKAMRGHGRSS 624


>gi|307150196|ref|YP_003885580.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Cyanothece sp. PCC 7822]
 gi|306980424|gb|ADN12305.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Cyanothece sp. PCC 7822]
          Length = 643

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 65/168 (38%), Gaps = 19/168 (11%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-------EQLYVMQSNG 335
            I S+D+ +     L +      S   SPD  Q+ + S              +  +Q +G
Sbjct: 150 SIISIDINTGDITTLVSGSDFYSSPRLSPDGLQLAWLSWNHPNLPWDETELSIASVQEDG 209

Query: 336 S--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +    K I+  +  S  +P WS +G  + F+      + +    + G+ + L   ++   
Sbjct: 210 TLKAAKIIAGGENESICEPKWSEEGQ-LYFSSDRTGWWNLYRYHQSGTIDTLCPLNAEFA 268

Query: 394 APTW-------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            P W       + +G  +  +  ++G     L  ++ N  N T I+TP
Sbjct: 269 YPHWVFGISTYTLAGDEIYCTYTQNGRW--YLAQLNPNTGNLTPIDTP 314



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 15/136 (11%)

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-------EKF 371
            SD E +  +  +  N  D   +    +  Y  P  SP G  +A+  ++         + 
Sbjct: 142 NSDLEPENSIISIDINTGDITTLVSGSD-FYSSPRLSPDGLQLAWLSWNHPNLPWDETEL 200

Query: 372 AIGVMKKDGS--QERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           +I  +++DG+    +++    N  +  P WS  G+ L FS  + G     LY    +G  
Sbjct: 201 SIASVQEDGTLKAAKIIAGGENESICEPKWSEEGQ-LYFSSDRTG--WWNLYRYHQSGTI 257

Query: 428 ETLINTPAYASDPQWV 443
           +TL    A  + P WV
Sbjct: 258 DTLCPLNAEFAYPHWV 273



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 99/284 (34%), Gaps = 35/284 (12%)

Query: 126 VEFRLWDVKDRKQIIGKK-FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           V+ RL+     KQ+  ++    +  S R+ A  I D     +           +    S 
Sbjct: 97  VDGRLY-----KQLPNREPQPLTAESKRRYADAIVDSQRSRLI---------CVCEDHSN 142

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR------ 238
                +NS+  +D +  +I  L    D     PR SP+  ++A+ +++  ++        
Sbjct: 143 SDLEPENSIISIDINTGDITTLVSGSD-FYSSPRLSPDGLQLAWLSWNHPNLPWDETELS 201

Query: 239 -VYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
              + +    +A K I    +  +  P++S  G +   S  +    ++Y    QS   + 
Sbjct: 202 IASVQEDGTLKAAKIIAGGENESICEPKWSEEG-QLYFSSDRTGWWNLYRY-HQSGTIDT 259

Query: 297 LTNTLFINISASY-------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           L           +       +    +I     + G+  L  +  N  +   I  D   + 
Sbjct: 260 LCPLNAEFAYPHWVFGISTYTLAGDEIYCTYTQNGRWYLAQLNPNTGNLTPI--DTPCTE 317

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
              + S +  L+       +  A+  +  +  Q  +L + +NL 
Sbjct: 318 IGSLKSYKNTLVFIGGSPTQPNAVIKVDLNSKQTTILKQSTNLD 361


>gi|189463213|ref|ZP_03011998.1| hypothetical protein BACCOP_03926 [Bacteroides coprocola DSM 17136]
 gi|189430192|gb|EDU99176.1| hypothetical protein BACCOP_03926 [Bacteroides coprocola DSM 17136]
          Length = 745

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 61/174 (35%), Gaps = 33/174 (18%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----- 274
           S +++++   ++     +      T     P +  +F   I+    S + K  LI     
Sbjct: 65  SSDKKRIVKYSFKTGKEVEAIFDVTTARDCPVK--SFDDYIM----SPDEKLILIQTDTK 118

Query: 275 -SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              +     + Y  ++++N  E L+          +SPD  Q+ F  +        V   
Sbjct: 119 PIYRHSFTAEYYIYNVKNNKMEPLSKN-GPQQVPLFSPDGFQVAFVRN---NNIFLVKLL 174

Query: 334 NGSDQKRISQDKEAS---YFDPVW--------------SPQGDLIAFTKFSGEK 370
            G+ + ++++D E +      P W              S    +IA+ +F   +
Sbjct: 175 FGNSESQVTKDGEYNKVLNGIPDWVYEEEFSFNRAFDFSADSKMIAYIRFDESQ 228


>gi|118591769|ref|ZP_01549165.1| WD domain/cytochrome c family protein [Stappia aggregata IAM 12614]
 gi|118435762|gb|EAV42407.1| WD domain/cytochrome c family protein [Stappia aggregata IAM 12614]
          Length = 488

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 56/270 (20%), Positives = 98/270 (36%), Gaps = 36/270 (13%)

Query: 185 VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VSG   N L +    DG+    +       +     SP+++ +A A++D     RV L  
Sbjct: 132 VSGGDDNDLILWSTSDGS--HQVLEGHTAKIMGLAVSPDKRTIASASWDA----RVGLWP 185

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTL 301
                     G+   +  A  FS +G +   S   D ++ ++  DL + + +R+   N  
Sbjct: 186 VDGGAPLYLAGHTAGVN-AVAFSRDGHQL-YSASVDGSIKLW--DLATGSEKRVIDRNGF 241

Query: 302 FINISASYSPD--SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            IN+ A        S I + S  +G  +  V+     ++      +         SP G 
Sbjct: 242 GINVIAVGGEGERESWIAYGSQ-DGVTR--VVDIETGERLHDFTFERRPILAMAVSPDGS 298

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD----GDT 414
            +A     G      +   D     L  +  + L+ P W+     L FS+  D    G  
Sbjct: 299 RLATGDGHG-----YITVFDTKSWALETDFRAALKGPIWA-----LAFSKDGDVLHAGGI 348

Query: 415 GSKLYS---IDLNGRNETLINTPAYASDPQ 441
            + +YS    DL   +     TP +   P+
Sbjct: 349 ENIVYSWPLADLATSDPMATETPKFLKKPE 378



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 47/142 (33%), Gaps = 16/142 (11%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   +V      G +   ++ S      ++ +   A       SP    IA   +     
Sbjct: 127 DGGHLV----SGGDDNDLILWSTSDGSHQVLEGHTAKIMGLAVSPDKRTIASASWDA--- 179

Query: 372 AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGD-------TGSKLYSIDL 423
            +G+   DG     L    + + A  +S  G  L +S   DG        TGS+   ID 
Sbjct: 180 RVGLWPVDGGAPLYLAGHTAGVNAVAFSRDGHQL-YSASVDGSIKLWDLATGSEKRVIDR 238

Query: 424 NGRNETLINTPAYASDPQWVGF 445
           NG    +I          W+ +
Sbjct: 239 NGFGINVIAVGGEGERESWIAY 260


>gi|328872367|gb|EGG20734.1| transcription initiation factor TFIID subunit [Dictyostelium
           fasciculatum]
          Length = 888

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/245 (15%), Positives = 88/245 (35%), Gaps = 27/245 (11%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   ++    SP+ Q +   + D     R++ ++T  +    +  N+   +   +F
Sbjct: 598 TFVGHSGPVYGTSISPDNQFILSCSEDC--TTRLWSLETMSNLVCYKGHNYP--VWDVQF 653

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S  G     +   D+   ++S +  S      T  L    S  + P+ + +   S     
Sbjct: 654 SPYGYYFA-TASHDKTARLWSTNYLS-PLRIFTGHLSDVNSVKFHPNINYLATVSS---D 708

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + + +++     RI     A  +   +SP G  +A     GE  ++ +      ++  
Sbjct: 709 KSVRLFEAHTGKCVRIMMGHRAPVYSLAFSPDGRFLA---TGGEDSSVILWDLSTGRKMK 765

Query: 386 LVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI--------DLNGRNETLINTPA 435
            +E     + +  +S  G  L  +     D+  +L+ +         +NG  + +I TP 
Sbjct: 766 TLEGHAKTVHSLDFSMDGNLLASAST---DSTVRLWDVNKALTSSLSVNG--QPIIETPT 820

Query: 436 YASDP 440
             S  
Sbjct: 821 SKSMG 825


>gi|301775785|ref|XP_002923301.1| PREDICTED: aladin-like isoform 2 [Ailuropoda melanoleuca]
          Length = 553

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 66/198 (33%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  DD     + + +      P      +  + A  +       L    
Sbjct: 158 AWHPHTNKFAVALLDD----SIRVYNASSTIVPSLKHRLQRNVAALAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QT-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIL 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  +         F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVL-AATPSAVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGSRLLFT 346



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 61/209 (29%), Gaps = 42/209 (20%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V D        L   R   +    +SP+  KV  AT     + RV+          +R
Sbjct: 269 ILVWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVLAAT--PSAVFRVWEAQMWT---CER 323

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                       +S +G R L +V       IYS+       ER                
Sbjct: 324 WPTLSGRCQTGCWSPDGSRLLFTVL--GEPLIYSLSF----PERCGEGKG---------- 367

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDLIAFTKFSG 368
                    R G  +   + ++ S+    + D E          VW P G+ +A      
Sbjct: 368 ---------RVGGAKSATIVADLSETTVQTPDGEERLGGEAHSMVWDPSGERLAVLMKGN 418

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +        DG    LL    N  +P +
Sbjct: 419 PRVQ------DGKPVILLFRTRN--SPVF 439


>gi|291221505|ref|XP_002730763.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 443

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 70/197 (35%), Gaps = 17/197 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +             I++V+ ++        +I    + + A ++S +G+  L +   
Sbjct: 56  WSSD-SMFILCGMYKRGIIQVWSLEQPEWTC--KIDEGSAGLTAVQWSPDGRHILTTADF 112

Query: 279 DEAMDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +  + ++S+  +S +  +        I+    +S D   +     R+ K+ + V   N  
Sbjct: 113 NLRITVWSLVNKSVSYIKYPKEAKPGID----FSKDGKYMALAERRDCKDFISVFVCNTW 168

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--- 393
              +  +          WSP G ++     +  ++ + +   DG    +    +      
Sbjct: 169 QLVKHFETDTRDLAGISWSPDGRVLC-VWDTPLEYKVLLYLADGRC--VATYSAYDWALG 225

Query: 394 --APTWSPSGRSLIFSR 408
             +  WSP+ + L    
Sbjct: 226 IKSVAWSPTSQFLAIGS 242


>gi|256073936|ref|XP_002573283.1| hypothetical protein [Schistosoma mansoni]
 gi|238658460|emb|CAZ29515.1| expressed protein [Schistosoma mansoni]
          Length = 255

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 59/169 (34%), Gaps = 9/169 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+   +A    D + +      D    +    +      + +  +  +G   L+S  
Sbjct: 18  AWCPSGHLIATCGRD-KSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPHG-EVLVSTS 75

Query: 278 KDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDRE-----GKEQLYVM 331
            D  +++Y  ++   A   +LT        A +SP    +   SD       G E     
Sbjct: 76  YDNKINVYKEEIDDWAVFIQLTGHDSTVWKAEFSPSGDILASCSDDRCIKLWGWEGACSK 135

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            ++      ++     + FD  WSP G L+A +  S  +  I  M   G
Sbjct: 136 STSWVCIATLTGFHIRTIFDLSWSPDGQLLA-SCGSDNRLCIYKMPSSG 183


>gi|119484656|ref|XP_001262107.1| WD repeat protein [Neosartorya fischeri NRRL 181]
 gi|119410263|gb|EAW20210.1| WD repeat protein [Neosartorya fischeri NRRL 181]
          Length = 824

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 10/160 (6%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSL------CVMDRDGANIRYLTPSRDQILFEP 217
           ++ T       SR +  + +   G ++  +       V++ D               F  
Sbjct: 600 ETNTFIADHELSRAINCTATSPDGRLRVVIGDSPDAWVVEADTGRPVQPLRGHRDFGFAC 659

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + +A +  D      V + D R  R  + I +  +   + RFS  G      + 
Sbjct: 660 AWSPDMRHIATSNQDK----TVIIWDARTWRILQTIESDVAGYRSVRFSPVGGGPRTLLL 715

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            + A  I  V+ Q+  T ++ +       A +SPD S I 
Sbjct: 716 AEPADRIAIVNAQTYQTRQVHDFFGEIGGADFSPDGSTIW 755



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 56/153 (36%), Gaps = 10/153 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +          D    ++++    R  + +   R    A  +S + +    +  +D
Sbjct: 620 SPDGR----LRVVIGDSPDAWVVEADTGRPVQPLRGHRDFGFACAWSPDMRHIA-TSNQD 674

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           + + I+  D ++    + + + +    S  +SP           E  +++ ++ +     
Sbjct: 675 KTVIIW--DARTWRILQTIESDVAGYRSVRFSPVGGGPRTLLLAEPADRIAIVNAQTYQT 732

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +++  D         +SP G  I +   + E F
Sbjct: 733 RQV-HDFFGEIGGADFSPDGSTI-WVANTDEHF 763



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 38/100 (38%), Gaps = 5/100 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +  IN +A+ SPD    V   D       +V++++     +  +      F   WSP   
Sbjct: 611 SRAINCTAT-SPDGRLRVVIGD---SPDAWVVEADTGRPVQPLRGHRDFGFACAWSPDMR 666

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            IA T    +   I   +     + +  + +  ++  +SP
Sbjct: 667 HIA-TSNQDKTVIIWDARTWRILQTIESDVAGYRSVRFSP 705


>gi|330919299|ref|XP_003298555.1| hypothetical protein PTT_09312 [Pyrenophora teres f. teres 0-1]
 gi|311328187|gb|EFQ93355.1| hypothetical protein PTT_09312 [Pyrenophora teres f. teres 0-1]
          Length = 889

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 88/228 (38%), Gaps = 19/228 (8%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D A I  L+ S++ I +    +   + +A+       +L V+   +      K+ G+F 
Sbjct: 285 PDFAQISSLSISQNDIDYV-AINKTGEWLAFGASKLGQLL-VWEWQSE-SYILKQQGHFD 341

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           SM     +S +G+R  I+   D  + ++ V+         T  +    +  ++   + ++
Sbjct: 342 SMNTI-AYSPDGQRI-ITAADDGKIKLWEVN-SGFCVVTFTEHMGGVTACEFAKKGN-VL 397

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F +  +G  + + +     + +  +     S+      P G+++         F I +  
Sbjct: 398 FTASLDGSVRAWDLHR-YRNFRTFTAPSRLSFSSLAVDPSGEVVCAGSID--SFDIHIWS 454

Query: 378 KDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 +LL   S  + P    ++SP   +L+       D   ++++I
Sbjct: 455 VQTG--QLLDRLSGHEGPVSSLSFSPDASTLV---SGSWDRTVRIWNI 497



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 85/273 (31%), Gaps = 25/273 (9%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H +    Y S+   +   +SR         S  +   +  +D++  + +       Q + 
Sbjct: 143 HRVYTGHYNSVQSIEWSSDSRFFL----SASKDMTARIWSVDQEEGHAQTTLSGHRQEVV 198

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLM--------------DTRIDRAPKRIGNFRS-MI 260
              FS +Q+ +   + D       Y++              + +   A +   +  +  +
Sbjct: 199 GVWFSKDQETIYTVSKDGALFTWKYMLRYDAPEDADEDDDENLQWGIAERHFFHQNNAHV 258

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               F     + L++        I+ +         L+ +       + +     + F +
Sbjct: 259 TCANFHPE-SKLLVTGFSHGIFFIHELP-DFAQISSLSISQNDIDYVAINKTGEWLAFGA 316

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            + G+  ++  QS     K+  Q    S     +SP G  I  T     K  +  +    
Sbjct: 317 SKLGQLLVWEWQSESYILKQ--QGHFDSMNTIAYSPDGQRII-TAADDGKIKLWEVNSGF 373

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                      + A  ++  G  ++F+   DG 
Sbjct: 374 CVVTFTEHMGGVTACEFAKKGN-VLFTASLDGS 405


>gi|159478088|ref|XP_001697136.1| hypothetical protein CHLREDRAFT_72099 [Chlamydomonas reinhardtii]
 gi|158274610|gb|EDP00391.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 282

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 56/166 (33%), Gaps = 21/166 (12%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-----TLFINISASYSPDSSQI 316
           A  +S +G+R        +   +   D  +    ++T+             ++ P  +++
Sbjct: 2   AVAWSPDGRRLA---SGGDDCRLLLWDAATG---QVTHELAGGHQGGVYGLAFGPGGARL 55

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                  G + + +       Q  +      +     WS  G  +A    +GE     V 
Sbjct: 56  ASC---GGDKAIRIWDVASGAQVSVLAGHNMTVRCVAWSHSGRHLA---SAGEDCTARVW 109

Query: 377 KKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +    +E   ++D +    A  WSP   +L+      GD   +L+ 
Sbjct: 110 RAAAGREVAKLDDFDDDVNAVAWSPDDLTLLLLAS--GDQAVRLWD 153



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 64/192 (33%), Gaps = 16/192 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISV 276
            +SP+ +++A       D  R+ L D    +    + G  +  +    F   G R     
Sbjct: 4   AWSPDGRRLA----SGGDDCRLLLWDAATGQVTHELAGGHQGGVYGLAFGPGGARLA--- 56

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNG 335
                  I   D+ S A   +     + +   ++S     +   +  +   +++   + G
Sbjct: 57  SCGGDKAIRIWDVASGAQVSVLAGHNMTVRCVAWSHSGRHLA-SAGEDCTARVWRA-AAG 114

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQ 393
            +  ++  D +       WSP    +     +    A+ +   +    R  L      +Q
Sbjct: 115 REVAKL-DDFDDDVNAVAWSPD--DLTLLLLASGDQAVRLWDGETFAHRGDLPGGSGRVQ 171

Query: 394 APTWSPSGRSLI 405
              ++P GR L 
Sbjct: 172 VVAFNPDGRQLA 183



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/248 (11%), Positives = 73/248 (29%), Gaps = 24/248 (9%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII------KNSLC 194
           G++  S     R +   + D     +T E    +   ++       G          ++ 
Sbjct: 9   GRRLASGGDDCRLL---LWDAATGQVTHELAGGHQGGVYGLAFGPGGARLASCGGDKAIR 65

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D        +    +  +    +S + + +A       +     +      R   ++ 
Sbjct: 66  IWDVASGAQVSVLAGHNMTVRCVAWSHSGRHLA----SAGEDCTARVWRAAAGREVAKLD 121

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDS 313
           +F   + A  +S +    L+    D+A+ ++  D ++ A    L          +++PD 
Sbjct: 122 DFDDDVNAVAWSPDDLTLLLLASGDQAVRLW--DGETFAHRGDLPGGSGRVQVVAFNPDG 179

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            Q+       G+    V   + +     +               G+ +A     G    +
Sbjct: 180 RQLA-----AGRSDTTVRVWDLTTGAAGAGGSGDVVRRLAIPADGEQVAVGCKDG---HV 231

Query: 374 GVMKKDGS 381
            V      
Sbjct: 232 RVWDVATG 239


>gi|21228689|ref|NP_634611.1| putative surface layer protein [Methanosarcina mazei Go1]
 gi|20907194|gb|AAM32283.1| putative surface layer protein [Methanosarcina mazei Go1]
          Length = 755

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 74/209 (35%), Gaps = 12/209 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  + AY T    + + V         A   +GN+   I     + +GK+A ++  
Sbjct: 530 AVSPDGTE-AYVTNCGSNNVSVIDTGANTVTATVPVGNWPEGI---AVTPDGKKAYVANS 585

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
            +      +V + +   + +T+T+         + +PD  ++   +   G   +    ++
Sbjct: 586 GNITAPEDTVSVINTINDTVTDTIPAGRHPCGVAVTPDGKKVYVANTYGGTVSVVDAATD 645

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                  + D   S F    +P G  +A+    G   ++     D     + V    L+ 
Sbjct: 646 TVTA---TVDTGNSPFKVAVNPAGT-LAYVANEGGTVSVIDTSNDTVIATVDVAGGRLEG 701

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +P G+ + +         S L  ID 
Sbjct: 702 LAITPDGKKV-YVAHYGSSDNSTLSVIDA 729



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 62/202 (30%), Gaps = 17/202 (8%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +        Y T     +  V ++D R      ++   +        + +GK A ++ 
Sbjct: 447 PTWP-----FVYMTGGLNTLRTVSVIDIRTGIVITKVKTGK-HPSGIAVTPDGKTAYVTN 500

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  +    +D  +N               + SPD ++    +   G   + V+ + G+
Sbjct: 501 SWDNNVS--VIDTATNTVIDSVKVGSYPCGVAVSPDGTEAYVTNC--GSNNVSVIDT-GA 555

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----KFAIGVMKKDGSQER-LLVEDSN 391
           +    +            +P G   A+   SG     +  + V+          +    +
Sbjct: 556 NTVTATVPVGNWPEGIAVTPDGKK-AYVANSGNITAPEDTVSVINTINDTVTDTIPAGRH 614

Query: 392 LQAPTWSPSGRSLIFSRKKDGD 413
                 +P G+ +  +    G 
Sbjct: 615 PCGVAVTPDGKKVYVANTYGGT 636


>gi|327293730|ref|XP_003231561.1| subtilase [Trichophyton rubrum CBS 118892]
 gi|42558926|sp|Q9UW98|DPP5_TRIRU RecName: Full=Dipeptidyl-peptidase 5; AltName:
           Full=Dipeptidyl-peptidase V; Short=DPP V; Short=DppV;
           AltName: Allergen=Tri r 4; Flags: Precursor
 gi|5813788|gb|AAD52012.1|AF082514_1 Tri r 4 allergen [Trichophyton rubrum]
 gi|22652137|gb|AAN03632.1|AF407232_1 secreted dipeptidylpeptidase V [Trichophyton rubrum]
 gi|42541136|gb|AAS19461.1| Tri r4 allergen [Trichophyton rubrum]
 gi|326466189|gb|EGD91642.1| subtilase [Trichophyton rubrum CBS 118892]
          Length = 726

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 67/186 (36%), Gaps = 33/186 (17%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-------YSPDSSQIVFESDREG 324
           A+ S    ++ D YS D +     +                    S D   + F S    
Sbjct: 188 AVFSGTLTKSGDKYSFDGKLKNLVQPVKYAESPYPPFGGSGDYDLSSDGKTVAFMSKAPE 247

Query: 325 KEQ-------LYVMQSNGS---------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             +       ++++  +GS         +  R  Q  E +   PV+SP G  IA+ + + 
Sbjct: 248 LPKANLTTSYIFLVPHDGSRVAEPINKRNGPRTPQGIEGASSSPVFSPDGKRIAYLQMAA 307

Query: 369 EKFA-----IGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYS 420
           + +      I + +   ++    +  +  ++P    WS  GR+L  + +       KL++
Sbjct: 308 KNYESDRRVIHIAEVGTNKPVQRIASNWDRSPEAVKWSSDGRTLYVTAEDH--ATGKLFT 365

Query: 421 IDLNGR 426
           +  + R
Sbjct: 366 LPADAR 371



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 74/237 (31%), Gaps = 37/237 (15%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S  IY S+      +++ +     +V SG +  S      DG     + P +      P 
Sbjct: 166 SARIYDSLFVRH--WDTYVGTQFNAVFSGTLTKSGDKYSFDGKLKNLVQPVKYAESPYPP 223

Query: 219 F--------SPNQQKVAYAT---------------YDDEDILRVYLMDTRIDRAPKRIGN 255
           F        S + + VA+ +               +                  P+    
Sbjct: 224 FGGSGDYDLSSDGKTVAFMSKAPELPKANLTTSYIFLVPHDGSRVAEPINKRNGPRTPQG 283

Query: 256 FRSMILAPRFSSNGKRALI-----SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-- 308
                 +P FS +GKR           + +   I+  ++ +N   +   +   + S    
Sbjct: 284 IEGASSSPVFSPDGKRIAYLQMAAKNYESDRRVIHIAEVGTNKPVQRIASN-WDRSPEAV 342

Query: 309 -YSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLI 361
            +S D   +   ++     +L+ + ++  D      +  D   S F  + S +  LI
Sbjct: 343 KWSSDGRTLYVTAEDHATGKLFTLPADARDNHKPAVVKHDGSVSSFYFIGSSKSVLI 399


>gi|86142359|ref|ZP_01060869.1| hypothetical protein MED217_11954 [Leeuwenhoekiella blandensis
           MED217]
 gi|85831111|gb|EAQ49568.1| hypothetical protein MED217_11954 [Leeuwenhoekiella blandensis
           MED217]
          Length = 816

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 78/212 (36%), Gaps = 45/212 (21%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-P-RFSSN 268
           D  L    +SP++ K+A+     E+ ++VY++D     A +    F +  +  P  +  +
Sbjct: 114 DAQLSNFNWSPDESKMAFTN-TIENGVQVYILDLETATAKRVTEAFVNANMGNPISWFKD 172

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS-PDSSQI----------- 316
           GK  L+++            L +   E +     +    + S  D S+            
Sbjct: 173 GKSLLVNM------------LPATRKELINTAEAVPTGPTISTSDGSKAQNRTYQDLLQN 220

Query: 317 ---VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA- 372
              VF  ++     L  +  +G+          A Y D  +SP G  I  T    + F+ 
Sbjct: 221 PNDVFNFEQLATSALVKVNLDGTST---LWKDAAMYSDVSFSPDGTYI-MTSTIHKPFSY 276

Query: 373 ----------IGVMKKDGSQERLLVEDSNLQA 394
                     + V  +DG++ +++ E   L+ 
Sbjct: 277 IVPYYRFPETVTVYDQDGTEVKVINETPLLEE 308



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 64/184 (34%), Gaps = 20/184 (10%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISA-SYSPDSSQIVFES- 320
           +S +  +   +   +  + +Y +DL++   +R+T         +  S+  D   ++    
Sbjct: 122 WSPDESKMAFTNTIENGVQVYILDLETATAKRVTEAFVNANMGNPISWFKDGKSLLVNML 181

Query: 321 DREGKEQLYVMQSNGSDQKRISQDK----EASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
               KE +   ++  +     + D       +Y D + +P      F        A+  +
Sbjct: 182 PATRKELINTAEAVPTGPTISTSDGSKAQNRTYQDLLQNPND---VFNFEQLATSALVKV 238

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY--------SIDLNGRNE 428
             DG+   L  + +     ++SP G  ++ S      +    Y          D +G   
Sbjct: 239 NLDGTS-TLWKDAAMYSDVSFSPDGTYIMTSTIHKPFSYIVPYYRFPETVTVYDQDGTEV 297

Query: 429 TLIN 432
            +IN
Sbjct: 298 KVIN 301



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 37/85 (43%), Gaps = 5/85 (5%)

Query: 326 EQLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             + +     ++ + I+   E A   +  WSP    +AFT        + ++  + +  +
Sbjct: 93  NNIKIKGIEETEAREINGLPEDAQLSNFNWSPDESKMAFTNTIENGVQVYILDLETATAK 152

Query: 385 LLVE---DSNLQAP-TWSPSGRSLI 405
            + E   ++N+  P +W   G+SL+
Sbjct: 153 RVTEAFVNANMGNPISWFKDGKSLL 177


>gi|321259353|ref|XP_003194397.1| general transcriptional repressor [Cryptococcus gattii WM276]
 gi|317460868|gb|ADV22610.1| general transcriptional repressor, putative [Cryptococcus gattii
           WM276]
          Length = 564

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 74/232 (31%), Gaps = 30/232 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALIS 275
           +FS + + +A        I  V     R+      + N      I +  FS +GK    +
Sbjct: 250 KFSNDGKYLATGCNRTAQIYDVKT-GARVSILQDELANRTGDLYIRSICFSPDGKFLA-T 307

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             +D  + I+  DL+      L         S  +S D   +V  S   G +   +    
Sbjct: 308 GAEDRQIRIW--DLKQRRICHLLQGHMQEIYSLDFSRDGRFLVSGS---GDKSARIWDVE 362

Query: 335 GSDQK---RI-------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-- 382
                   +I           +A       SP G L+A          + V      Q  
Sbjct: 363 KGTCVFNLQIEDFIHNEHGPIDAGITSVALSPDGKLVAAGSLDT---MVRVWNVSTGQQV 419

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           ERL     ++ +  +SP G+ L+      G     L   DL G    + + P
Sbjct: 420 ERLKGHKDSVYSVAFSPDGKCLV-----SGSLDRTLRIWDLTGTKREVESLP 466



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 78/244 (31%), Gaps = 50/244 (20%)

Query: 150 SWRKIAHTI---SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG--ANIR 204
             R+I H +     +IY       G F            SG     +  +++     N++
Sbjct: 320 KQRRICHLLQGHMQEIYSLDFSRDGRFLVS--------GSGDKSARIWDVEKGTCVFNLQ 371

Query: 205 ---YLTPSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
              ++      I         SP+ + VA  + D      V + +    +  +R+   + 
Sbjct: 372 IEDFIHNEHGPIDAGITSVALSPDGKLVAAGSLDT----MVRVWNVSTGQQVERLKGHKD 427

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-------------------LTN 299
            + +  FS +GK  L+S   D  + I+  DL     E                    L  
Sbjct: 428 SVYSVAFSPDGK-CLVSGSLDRTLRIW--DLTGTKREVESLPPGKEAQKNLGTCQSTLNG 484

Query: 300 TLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                +S + SPD   +V  S DR     +     +    + + Q  + S      +  G
Sbjct: 485 HKDYVLSVAISPDGQWVVSGSKDRS----IQFWHISTGQAQLMLQGHKNSVISIDLARSG 540

Query: 359 DLIA 362
             +A
Sbjct: 541 GYLA 544



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 49/186 (26%), Gaps = 46/186 (24%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
               L    R+W+V   +Q+            R   H   D +Y       G        
Sbjct: 400 AAGSLDTMVRVWNVSTGQQVE-----------RLKGHK--DSVYSVAFSPDGKCL----- 441

Query: 180 VSESVVSGIIKNSLCVMDRDG------------------ANIRYLTPSRDQILFEPRFSP 221
                VSG +  +L + D  G                     +         +     SP
Sbjct: 442 -----VSGSLDRTLRIWDLTGTKREVESLPPGKEAQKNLGTCQSTLNGHKDYVLSVAISP 496

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + Q V   + D      +        +A   +   ++ +++   + +G     S   D  
Sbjct: 497 DGQWVVSGSKDR----SIQFWHISTGQAQLMLQGHKNSVISIDLARSGGYLA-SGSGDCM 551

Query: 282 MDIYSV 287
             I+  
Sbjct: 552 ARIWKY 557


>gi|254572265|ref|XP_002493242.1| General repressor of transcription, forms complex with Cyc8p
           [Pichia pastoris GS115]
 gi|238033040|emb|CAY71063.1| General repressor of transcription, forms complex with Cyc8p
           [Pichia pastoris GS115]
 gi|328352743|emb|CCA39141.1| Transcriptional repressor TUP1 [Pichia pastoris CBS 7435]
          Length = 595

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/325 (13%), Positives = 109/325 (33%), Gaps = 44/325 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +  G ++L    +++DV+  + +      SS       A+   D     +      F
Sbjct: 293 GKFLATGCNKLT---QVFDVQTGELVARLSDDSSAN-----ANGTYDTDTGDLYIRSVCF 344

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +    +++    +G     + + D    +I  +    +Q ++   F P+  ++   + D 
Sbjct: 345 SPDGKYLA----TGAEDKLIRIWDLSTRSIVKVLRGHEQDIYSLDFFPDGTRLVSGSGDR 400

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN- 292
                V + +    +    +      +     S +GK    +   D A+ ++  D +   
Sbjct: 401 ----SVRIWNLVSSQCALTLSIEDG-VTTVAVSPDGKLIA-AGSLDRAVRVW--DAEGGF 452

Query: 293 ATERLTN-------TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK------ 339
             ERL +             S +++ D   I   S  +   +L+ +  N +         
Sbjct: 453 LVERLDSENVGGNGHKDSVYSVTFTHDGKGIASGSL-DSTVKLWSLDVNKTSSSKTKSSC 511

Query: 340 RISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            ++      +   V  +P    I           + +  K+     L+++       + S
Sbjct: 512 EVTYVGHRDFVLSVCVTPDDKYILSGSKDRG---VMIWHKETGDPLLMLQGHRNSVISVS 568

Query: 399 PS----GRSLIFSRKKDGDTGSKLY 419
            +    G+   F+    GD  ++++
Sbjct: 569 VNQELEGKGGYFATG-SGDCKARIW 592


>gi|220907543|ref|YP_002482854.1| serine/threonine protein kinase with WD40 repeats [Cyanothece sp.
           PCC 7425]
 gi|219864154|gb|ACL44493.1| serine/threonine protein kinase with WD40 repeats [Cyanothece sp.
           PCC 7425]
          Length = 596

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 79/240 (32%), Gaps = 25/240 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG     + + + +  N+ +        +    FSP+ Q +A  + D         +   
Sbjct: 356 SGGDDRLIHLWEPESGNLVHSLRGHQHAINALCFSPDHQLLASGSADK-------TIKLW 408

Query: 246 IDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                + I +     LA     F+ +      S   D ++ I+ +  +      L +  +
Sbjct: 409 HPGKGEWIADLIGHTLAVKTLAFAPSQPWLA-SGSSDRSVKIWDL-ARLKVLHTLADHTW 466

Query: 303 INISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              + ++SPD   +   S DR     + + +     + R             ++P G+ +
Sbjct: 467 SVTAIAFSPDGQFLATGSEDRT----IQLWECKSWQKVRTLSGHGWPITSLAFTPDGNWL 522

Query: 362 AFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
               +      I V +    +E  RL      + A   +P G ++        D   +L+
Sbjct: 523 LSGSWDKT---IKVWQVSTGEELARLTGHRDAINAVALAPKGETIA---SASADQTLRLW 576



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 87/261 (33%), Gaps = 39/261 (14%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
             GA +L+       G DRL     LW+ +    +   +      +    A   S D +Q
Sbjct: 347 QAGADLLLA----SGGDDRL---IHLWEPESGNLVHSLRGHQHAIN----ALCFSPD-HQ 394

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     D   ++    +            + D  G  +   T           F+P+Q 
Sbjct: 395 LLASGSADKTIKLWHPGKGE---------WIADLIGHTLAVKTL---------AFAPSQP 436

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +A  + D      V + D    +    + +    + A  FS +G+    +  +D  + +
Sbjct: 437 WLASGSSDR----SVKIWDLARLKVLHTLADHTWSVTAIAFSPDGQFLA-TGSEDRTIQL 491

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +           L+   +   S +++PD + ++  S     + + V Q +  ++      
Sbjct: 492 WEC-KSWQKVRTLSGHGWPITSLAFTPDGNWLLSGS---WDKTIKVWQVSTGEELARLTG 547

Query: 345 KEASYFDPVWSPQGDLIAFTK 365
              +      +P+G+ IA   
Sbjct: 548 HRDAINAVALAPKGETIASAS 568


>gi|194209300|ref|XP_001501063.2| PREDICTED: similar to WD repeat domain 1 [Equus caballus]
          Length = 644

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/257 (15%), Positives = 79/257 (30%), Gaps = 55/257 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + + D   I  +       +   +++P+   +A  + D    LR++    R       
Sbjct: 78  VILRNIDNPAIADIYTEHAHQVVVAKYAPSGFYIA--SGDVSGKLRIWDTTQREHLLKYE 135

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK--------------------DEAMDIYSVDLQSN 292
              F   I    ++ + KR  +  +                          I SVD++ +
Sbjct: 136 YQPFAGKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKIINSVDIKQS 195

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RL      N +A +             EG    +  +    D  R            
Sbjct: 196 RPYRLATGSDDNCAAFF-------------EGPP--FKFKFTIGDHSRF-------VNCV 233

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFS 407
            +SP G+  A     G    I +      ++          D  + A +WSP    L+  
Sbjct: 234 RFSPDGNRFATASADG---QIYIYDGKTGEKVCALGGGKAHDGGIYAISWSPDSTHLL-- 288

Query: 408 RKKDGDTGSKLYSIDLN 424
               GD  SK++ +++N
Sbjct: 289 -SASGDKTSKIWDVNVN 304


>gi|306846193|ref|ZP_07478755.1| WD repeat-containing protein [Brucella sp. BO1]
 gi|306273444|gb|EFM55305.1| WD repeat-containing protein [Brucella sp. BO1]
          Length = 324

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 94/281 (33%), Gaps = 28/281 (9%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           + GK   +     R +    +  +   +      + + +       V      +      
Sbjct: 55  VDGKSLVTGGEDGR-VCRIDAKGVVTELANIPRKWITAVATGPNGTVGFASGKTTWSRAA 113

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG    +    +++ +    F+P  Q++A A Y+        L+ T     P  +  ++ 
Sbjct: 114 DGKVQEFT---QERSVEGIAFAPKGQRLAIARYNG-----ATLIWTGTAAKPVEL-EWKG 164

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +   FS +G+  + S+Q++ A+  +   L+ N   R+T         S+S  +  +  
Sbjct: 165 AHIGITFSPDGRFLITSMQEN-ALHGWR--LEDNKHMRMTGYPAKVKDWSWSAKAKWLA- 220

Query: 319 ESDREGKEQLYVMQSNGSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                G     V    G D         +    +         P G+ IA   ++     
Sbjct: 221 ---TSGAPAAIVWPFAGKDGPMGKAPLELGLRGDNMVTSVACHP-GEDIAAIGYNDG--M 274

Query: 373 IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKD 411
           I +++    +E LL       + + +W   G  L+F  +  
Sbjct: 275 ILIVRFADQKEVLLRRPGKGAITSMSWDEDGYRLVFGSQAG 315



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 28/202 (13%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----F 302
               +       +L+   + +GK  +      E   +  +D +      L N        
Sbjct: 36  DDGHQTSTVHDGLLSAAMAVDGKSLV---TGGEDGRVCRIDAK-GVVTELANIPRKWITA 91

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +    +       + F S     +  +   ++G  Q+     +E S     ++P+G  +A
Sbjct: 92  VATGPN-----GTVGFAS----GKTTWSRAADGKVQE---FTQERSVEGIAFAPKGQRLA 139

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +++G      +     ++   L         T+SP GR LI S +++   G +L    
Sbjct: 140 IARYNGATL---IWTGTAAKPVELEWKGAHIGITFSPDGRFLITSMQENALHGWRL---- 192

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            + ++  +   PA   D  W  
Sbjct: 193 EDNKHMRMTGYPAKVKDWSWSA 214


>gi|260909391|ref|ZP_05916099.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260636483|gb|EEX54465.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 818

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/216 (13%), Positives = 71/216 (32%), Gaps = 38/216 (17%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLTN 299
               + +      +     S++G+  L  V +            +Y +D+++    R+ +
Sbjct: 323 TGLTRPLTFGYHNVSLEDISADGRYILYMVSRSRLEKRPTTVSSLYKLDVKTMQATRVAH 382

Query: 300 TLFINISASYSPDSSQI-------VFESDREGKE----------QLYVMQSNGSDQKRIS 342
                  A +SPD+S +        F    +             QL+ +         ++
Sbjct: 383 DESFLSEARFSPDASSLLVKATAEAFNGVGKNVPEGSTPNMYDYQLFTLNVANKTVTPLT 442

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------- 395
           +    S  D  W+P+   I FT    ++  +  +    S+            P       
Sbjct: 443 KTFNPSVEDFSWNPRDGQIYFTALDKDQQKLFRLNPKTSKFVR------FDMPEDYVTRL 496

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +++ +   +     +      +LY+++L+    TL+
Sbjct: 497 SFARNAP-VAVWYGESASNSDRLYTLNLDNGKNTLL 531


>gi|295133243|ref|YP_003583919.1| Dipeptidyl aminopeptidase [Zunongwangia profunda SM-A87]
 gi|294981258|gb|ADF51723.1| Dipeptidyl aminopeptidase [Zunongwangia profunda SM-A87]
          Length = 747

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 63/209 (30%), Gaps = 45/209 (21%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPR--- 264
           S ++I     FS + Q+  +   + +  + +   D+  D   + +  N +S         
Sbjct: 29  SLERIYSSSEFSSDYQRPIFWIENGDAFVSIEKDDSGNDELIRYVSKNHQSNTYLAAQHL 88

Query: 265 -------------FSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNT--LFI 303
                         S +G + LI        + +   D +  D  +   ++L        
Sbjct: 89  AVNGKNLAIEDFSLSPDGSKVLIFTNSSRVWRSNTKGDFWVYDFDTKELKQLGKDFPSSS 148

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----------- 352
            + A +S D+  + +  D      +Y       +  R ++D      +            
Sbjct: 149 LMFAKFSEDNQFVAYVQD----FNIYKENFKTGEITRFTKDGTGDIINGTFDWVYEEEFG 204

Query: 353 -----VWSPQGDLIAFTKFSGEKFAIGVM 376
                +WSP    IAF +          M
Sbjct: 205 MRDGFIWSPDASKIAFWQLDASDIGTFYM 233



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 37/96 (38%), Gaps = 4/96 (4%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NGK  L   + D    IY VDL S     LT     +++  Y  D   +   +  +   Q
Sbjct: 354 NGKAFLRMTENDGWRHIYKVDLASGEKILLTPG-DYDVATYYQTDDKNLYIVASPDNATQ 412

Query: 328 --LYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDL 360
             LY +  NGS +  RI+  +         SP G  
Sbjct: 413 RYLYRVPLNGSGKLTRITPQQFEGVNTYDVSPNGKY 448


>gi|218234288|ref|YP_002369164.1| tolB domain protein [Bacillus cereus B4264]
 gi|218162245|gb|ACK62237.1| tolB domain protein [Bacillus cereus B4264]
          Length = 412

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 82/244 (33%), Gaps = 59/244 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG  I+     + + +  P++S + + +AY     + IL +Y +     +
Sbjct: 35  RHHNLWI-KVDGKEIQIT---KGEYITGPKWSYDGEWLAYVKGKKQSILELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++  F S     ++S                 + + D++        N  F N+SA 
Sbjct: 86  DGKKVTPFHSEASNYQWSPTENIIAFIFTG----TLNTFDVEKK------NADFENVSAG 135

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD    +  S+       +     G+    + +D   +               
Sbjct: 136 VGDYAWYPDGKNFLVSSEAHLLPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHD 191

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNL 392
                      WSP    I+F       +S +   + +++ +GS      + LL      
Sbjct: 192 DFLALVASGFKWSPDQKWISFLAVPTASWSADSNTLCLVRANGSRFEKVDQMLLNAQWFQ 251

Query: 393 QAPT 396
            AP+
Sbjct: 252 WAPS 255



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 78/202 (38%), Gaps = 29/202 (14%)

Query: 218 RFSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           ++SP+Q+ +++        + D   +  V    +R ++  + + N +    AP      K
Sbjct: 202 KWSPDQKWISFLAVPTASWSADSNTLCLVRANGSRFEKVDQMLLNAQWFQWAPS-----K 256

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREG- 324
             L  ++    + + +  L+      L     T   +++    +  D   IV  +   G 
Sbjct: 257 NILAYIEGSGRVALENKHLKVKELPVLQQNIFTPKGYVDWDFVWKNDRVIIVSRAKEAGI 316

Query: 325 --------KEQLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                      LY + S  + Q +I++       + P++  + + + + +   +K  + +
Sbjct: 317 ETPPEKRPLPSLYEVDSTSNAQHQITKKTNKQGDYHPIFMKKSNQLIWIRSDRKKADVWL 376

Query: 376 MKKDGSQERLLVEDSNLQAPTW 397
             KD  QE+  +E  N+  P W
Sbjct: 377 AHKDRKQEKKWIE--NIDVPAW 396



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       + + K DG + ++  +   +  P WS  G  L + + K   +  +LY
Sbjct: 30  KVAFIRH----HNLWI-KVDGKEIQI-TKGEYITGPKWSYDGEWLAYVKGKK-QSILELY 82

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 83  RLK-DGKKVTPFHS--EASNYQWSP 104


>gi|322504249|emb|CAM36961.2| conserved hypothetical protein [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 665

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 66/217 (30%), Gaps = 24/217 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP       A+ D      V L + R        G     +L+  FS  G R ++S   
Sbjct: 389 FSPRGDMFLTASRDR----TVRLWNVRTGGCTLMKGGHNGFVLSCDFSPKGNR-VVSSSD 443

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           D  + ++S    +++  ++              Y+P    IV  S       + V  +  
Sbjct: 444 DRTIKLWS----TSSCNKVATFKGHEDKVYCVKYNPSGDYIVSGSC---DNTVRVWNAES 496

Query: 336 SDQKRISQDKEASYFDPVWS--PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             +    +    + F   +S    G  +  +        +         + L+     + 
Sbjct: 497 QSKLATLKGHSLAVFSCAFSNTDNGKYVV-SGSDDRTIKVWDWGSGRDLKTLVGHIGTVW 555

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNET 429
           +  +S + + ++      G    +L   D   G    
Sbjct: 556 SVVFSHNDKYIV-----SGSMDYELILWDTATGSRLR 587


>gi|321474269|gb|EFX85234.1| hypothetical protein DAPPUDRAFT_300247 [Daphnia pulex]
          Length = 320

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 60/151 (39%), Gaps = 15/151 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM--- 242
           SG +  +L + D    N + L     + +    F P    + +A   + + +++Y +   
Sbjct: 130 SGSLDKTLRLWDLRSPNCQGLMHLTSRPVA--AFDPEG--LIFAAGVNSESVKLYDLRSF 185

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT--- 298
           D     + +            +FS +GK  L+S     +  I  VD         LT   
Sbjct: 186 DKGPFASFRLNTEKTCEWTGLKFSPDGKTILLSTN---SSIIRLVDAFHGNPTHTLTGHL 242

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLY 329
           N   I + AS+SPD SQ VF    +G+  ++
Sbjct: 243 NDKKIPLEASFSPD-SQFVFSGSTDGRVHVW 272


>gi|301057577|ref|ZP_07198657.1| PQQ enzyme repeat protein [delta proteobacterium NaphS2]
 gi|300448301|gb|EFK11986.1| PQQ enzyme repeat protein [delta proteobacterium NaphS2]
          Length = 497

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 83/257 (32%), Gaps = 33/257 (12%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L  +  DG    +L      +   P    +   + +   D+  +  V    T+       
Sbjct: 102 LYAIKADGTLKWHLFDVDGAVYSCPAIGADGT-IFFGLADNNAMCAVKADGTKKWCF--- 157

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                ++  +P    +G   +     D   ++++VD   N  + +      + S +  PD
Sbjct: 158 -STGSAVSTSPAVGKDGT--IYVQAVD---NLFAVDANGNQ-KWVFQVSGEDSSPAVGPD 210

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +  V          LY +  +G+ +     +       P     G    +    G    
Sbjct: 211 GTVYV-----GSLLSLYAINPDGTKKWVFDTEGFGIQSSPAVGADGT--VYI-LGGSDGN 262

Query: 373 IGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE--- 428
           +  +  DGS++        +  +P     G  +++     G     +Y+++ NG  +   
Sbjct: 263 LYAVNPDGSKKWAFKTGSGSASSPAIGSDG--VVYV----GSGDKNIYAVNPNGTQKWAF 316

Query: 429 ----TLINTPAYASDPQ 441
                + ++PA  SD  
Sbjct: 317 GTGDLVASSPAIVSDGT 333



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 64/188 (34%), Gaps = 18/188 (9%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               +  +P   ++G   +    KD  +   + D         T+   +  SA+   D +
Sbjct: 36  TDGPVDASPAVGADG--IVYVKSKDGNLYAINPDGSKKWAFNFTSAGSLGASAAIGNDGT 93

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             V          LY ++++G+ +  +     A Y  P     G  I F           
Sbjct: 94  IYV-----GSAAGLYAIKADGTLKWHLFDVDGAVYSCPAIGADGT-IFFGLADNNAM--C 145

Query: 375 VMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            +K DG+++      S +  +P     G   I+ +  D      L+++D NG  + +   
Sbjct: 146 AVKADGTKKWCFSTGSAVSTSPAVGKDGT--IYVQAVD-----NLFAVDANGNQKWVFQV 198

Query: 434 PAYASDPQ 441
               S P 
Sbjct: 199 SGEDSSPA 206


>gi|226478826|emb|CAX72908.1| F-box-like/WD repeat protein TBL1X [Schistosoma japonicum]
          Length = 686

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 61/179 (34%), Gaps = 19/179 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                +  +   ++ PN + +A  + D      + + D   DR    +      I   ++
Sbjct: 516 TFQGHENEVNAIKWDPNGRLLASCSDDM----TLKVWDMHHDRCVHDLRGHTKEIYTIKW 571

Query: 266 SSNGKRALI--------SVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQI 316
           S  G             S   D  + ++  D+++    R L+       S ++SPD   +
Sbjct: 572 SPTGPGTAFANAPLCLASASFDSTVRLW--DVETGQCRRILSRHTEPVYSVAFSPDGRLL 629

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              S     + +++   +  +    S       F+  W+ +GD +  +   G    + +
Sbjct: 630 ATGSF---DQCVHIWNVDSGNLIN-SYQGTGGIFEVCWNSRGDKVGASASDGSVVVLDL 684



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 43/136 (31%), Gaps = 9/136 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-----DDEDILRVYLMDTRI 246
           +L V D       +      + ++  ++SP     A+A              V L D   
Sbjct: 544 TLKVWDMHHDRCVHDLRGHTKEIYTIKWSPTGPGTAFANAPLCLASASFDSTVRLWDVET 603

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +  + +      + +  FS +G+    +   D+ + I+  ++ S               
Sbjct: 604 GQCRRILSRHTEPVYSVAFSPDGRLLA-TGSFDQCVHIW--NVDSGNLINSYQGTGGIFE 660

Query: 307 ASYSPDSSQI-VFESD 321
             ++    ++    SD
Sbjct: 661 VCWNSRGDKVGASASD 676



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 46/159 (28%), Gaps = 25/159 (15%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-------DLQ 290
            +++         K      + + A ++  NG+    S   D  + ++ +       DL+
Sbjct: 502 NIHVCQLGCSSPVKTFQGHENEVNAIKWDPNGRLLA-SCSDDMTLKVWDMHHDRCVHDLR 560

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQD 344
            +  E  T          +SP      F       +       + +        +RI   
Sbjct: 561 GHTKEIYTI--------KWSPTGPGTAFANAPLCLASASFDSTVRLWDVETGQCRRILSR 612

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                +   +SP G L+A   F      + +   D    
Sbjct: 613 HTEPVYSVAFSPDGRLLATGSFDQ---CVHIWNVDSGNL 648



 Score = 40.8 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 48/308 (15%), Positives = 94/308 (30%), Gaps = 68/308 (22%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +    GD  +RI  + E V        L +      + + +  ++D    +  ++ +   
Sbjct: 354 LASGSGDSTARIWNLEEPVADPHHVPQLVLTHWVNLDGQTVLSNKDVTSLD--WNSDGSF 411

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A  +YD     RV+  D    R    +G  +  I A +++  G   L +   D+   I+
Sbjct: 412 LATGSYD--GFARVWNTD---GRLATTLGQHKGPIFALKWNKKGNYIL-TAGVDKTTIIW 465

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQD 344
               Q+    R+      +++ +   D   +  F S       ++V Q   S   +  Q 
Sbjct: 466 E--AQTG---RIAQQFAFHVAPTLDVDWQSLDSFASCST-DTNIHVCQLGCSSPVKTFQG 519

Query: 345 KEASYFDPVWSPQGDLIA------------------FTKFSGEKFAIGVM---------- 376
            E       W P G L+A                       G    I  +          
Sbjct: 520 HENEVNAIKWDPNGRLLASCSDDMTLKVWDMHHDRCVHDLRGHTKEIYTIKWSPTGPGTA 579

Query: 377 --------------------KKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDT 414
                                 +  Q R ++      + +  +SP GR L        D 
Sbjct: 580 FANAPLCLASASFDSTVRLWDVETGQCRRILSRHTEPVYSVAFSPDGRLLA---TGSFDQ 636

Query: 415 GSKLYSID 422
              ++++D
Sbjct: 637 CVHIWNVD 644


>gi|320089545|ref|NP_001188473.1| WD repeat-containing protein 17 [Danio rerio]
 gi|220678584|emb|CAX12667.1| novel protein similar to H.sapiens WDR17, WD repeat domain 17
           (WDR17) [Danio rerio]
          Length = 1283

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 70/197 (35%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P +   +A AT  +      ++ D 
Sbjct: 388 TASFDGTIKVWDINTLTAVYTSPGNEGVVYSLSWAPGDLNCIAGATSRNG----AFIWDV 443

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +   R   + ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 444 KKGKMITRFNEHGKNGIFCVAWSHKDSKRIA-TCSGDGFCIIRTID--GKVLHKY-KHPA 499

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 500 AVFGCDWSQNNKDMIATGCEDKNVRVYYLATSSDQPLKVFTGHTAKVFHVRWSPLREGIL 559

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 560 CSGSDDGTVRIWDYTQD 576


>gi|154331001|ref|XP_001561940.1| hypothetical protein [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 665

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 66/217 (30%), Gaps = 24/217 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP       A+ D      V L + R        G     +L+  FS  G R ++S   
Sbjct: 389 FSPRGDMFLTASRDR----TVRLWNVRTGGCTLMKGGHNGFVLSCDFSPKGNR-VVSSSD 443

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           D  + ++S    +++  ++              Y+P    IV  S       + V  +  
Sbjct: 444 DRTIKLWS----TSSCNKVATFKGHEDKVYCVKYNPSGDYIVSGSC---DNTVRVWNAES 496

Query: 336 SDQKRISQDKEASYFDPVWS--PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             +    +    + F   +S    G  +  +        +         + L+     + 
Sbjct: 497 QSKLATLKGHSLAVFSCAFSNTDNGKYVV-SGSDDRTIKVWDWGSGRDLKTLVGHIGTVW 555

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNET 429
           +  +S + + ++      G    +L   D   G    
Sbjct: 556 SVVFSHNDKYIV-----SGSMDYELILWDTATGSRLR 587


>gi|11499952|ref|NP_071198.1| hypothetical protein AF2375 [Archaeoglobus fulgidus DSM 4304]
 gi|2650725|gb|AAB91294.1| predicted coding region AF_2375 [Archaeoglobus fulgidus DSM 4304]
          Length = 506

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 68/213 (31%), Gaps = 11/213 (5%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--ISVQKDEAMD---I 284
             D    + V        +    I +       P    NG        V  D+      I
Sbjct: 12  RQDTRHYVYVVSQSNNWQQGRHLIDDPGKFYFDPLLDENGNHITVNYWVYLDDFNWPNFI 71

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKR--I 341
            +     +A   +    ++      SPD S+I F + R  G++++  +   G  Q    I
Sbjct: 72  GTYTATGSAIGGIELGKYV-YGPVRSPDGSKIAFSTVRGEGEQRVSELYVGGVGQPPKII 130

Query: 342 SQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
             D E  +      S  G  +AF      K   GV         LL  D +   P  S  
Sbjct: 131 YSDSEGRAVRQFSVSNDGK-VAFYLEGDSKGREGVFLYQNGNIMLLNSDLHFCNPMISGD 189

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G+ L        +    LY ID+N  +  ++ T
Sbjct: 190 GQKLYCLYNDLFEYKFSLYEIDINDGSYEMLGT 222



 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 84/239 (35%), Gaps = 16/239 (6%)

Query: 145 FSSPASWRKIAHTISDD---IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
            S   +W++  H I D     +  +  E G+  +   +V   +      N +      G+
Sbjct: 22  VSQSNNWQQGRHLIDDPGKFYFDPLLDENGNHITVNYWV--YLDDFNWPNFIGTYTATGS 79

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
            I  +   +   ++ P  SP+  K+A++T   E   RV  +       P +I    S   
Sbjct: 80  AIGGIELGK--YVYGPVRSPDGSKIAFSTVRGEGEQRVSELYVGGVGQPPKIIYSDSEGR 137

Query: 262 APR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV- 317
           A R    S++GK     ++ D          Q+     L + L    +   S D  ++  
Sbjct: 138 AVRQFSVSNDGK-VAFYLEGDSKGREGVFLYQNGNIMLLNSDLHF-CNPMISGDGQKLYC 195

Query: 318 -FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIG 374
            +    E K  LY +  N    + +      +    + +  G +I F  ++    F I 
Sbjct: 196 LYNDLFEYKFSLYEIDINDGSYEMLGTYNVHT-GLSLTNNDGSVIVFRGYNETNGFGIF 253


>gi|260061700|ref|YP_003194780.1| dipeptidyl aminopeptidase IV [Robiginitalea biformata HTCC2501]
 gi|88785832|gb|EAR17001.1| dipeptidyl aminopeptidase IV [Robiginitalea biformata HTCC2501]
          Length = 704

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 47/330 (14%), Positives = 107/330 (32%), Gaps = 57/330 (17%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +   + ++  V     ++ L V          LT   ++ + EP  SP+  KVAY   ++
Sbjct: 83  DENKVLIATQVEPIYRRSRLGVYYVYDLQQEQLTQISERKIQEPTLSPDGSKVAYVDQNN 142

Query: 234 EDILRV---YLMDTRIDRAPKRIGNF---------RSMILAPRFSSNGKRALISVQKDEA 281
             +L +    L+    D  P  I N           + + A  +++ G +       +  
Sbjct: 143 LYVLHLESGELLQVTEDGQPNAIINGVTDWVYEEEFAFVRAFEWNARGDKLAYLRFDERD 202

Query: 282 MDIYSVDLQSNATERLTN-------------------------TLFINISASY------- 309
           +  +S+D+  +      +                         T  +++  +Y       
Sbjct: 203 VPEFSMDVYGSDLYPFPHQFKYPKAGEANAVVSLHIHDLDSGQTRDVDLGEAYYIPRLQW 262

Query: 310 --SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLIAF 363
              PD   +   +  + + +L+ + +   +   + ++ +A+Y D      + P    I +
Sbjct: 263 MHHPDHLSVQTLNRHQNRLRLHRVDAASLETTLLLEETDAAYVDVTDNLTFLPDDRFI-W 321

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS--PSGRSLIFSRKKDGDTGSKLYSI 421
           T        I +   DG++ R L          +        + F    +G     +YS+
Sbjct: 322 TSEKDGYNHIYLHDTDGAELRQLTSGPWEVTAYYGYDADEGRIYFQSTAEGSILRDIYSV 381

Query: 422 DLNGRNETLINTPAYASDPQ----WVGFMD 447
              GR    ++             +  F+D
Sbjct: 382 SDRGRGLKRLSQGTGTHQATFSADFSYFID 411


>gi|293334157|ref|NP_001170709.1| hypothetical protein LOC100384791 [Zea mays]
 gi|238007080|gb|ACR34575.1| unknown [Zea mays]
          Length = 412

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 50/153 (32%), Gaps = 9/153 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +  A       D     L+D    +   ++        A  ++ +G+    +  +D
Sbjct: 250 SPDGKLAAIV----GDSPDGLLIDANSGKTVHKLHGHLDYSFASAWNPDGRTFA-TGNQD 304

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +   ++ V   S +   L   +    S  Y+PD   +      E  + +++        +
Sbjct: 305 KTCRVWDVRNLSRSVVVLGGNIGAVRSIRYTPDGKFMAMT---EPADFIHIFDVESGYSR 361

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +   D         +SP  + + F       F 
Sbjct: 362 KQELDFFGEIAGISFSPDTEAL-FVGVHDRFFN 393



 Score = 43.1 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 52/119 (43%), Gaps = 7/119 (5%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           ++D +     +         F   ++P+ +   +AT + +   RV+ +   + R+   +G
Sbjct: 267 LIDANSGKTVHKLHGHLDYSFASAWNPDGR--TFATGNQDKTCRVWDVR-NLSRSVVVLG 323

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPD 312
                + + R++ +GK   ++   + A  I+  D++S  + ++  +        S+SPD
Sbjct: 324 GNIGAVRSIRYTPDGKFMAMT---EPADFIHIFDVESGYSRKQELDFFGEIAGISFSPD 379



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 27/98 (27%), Gaps = 3/98 (3%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S SPD        D        ++ +N               F   W+P G   A     
Sbjct: 248 SLSPDGKLAAIVGD---SPDGLLIDANSGKTVHKLHGHLDYSFASAWNPDGRTFATGNQD 304

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  V     S   L      +++  ++P G+ + 
Sbjct: 305 KTCRVWDVRNLSRSVVVLGGNIGAVRSIRYTPDGKFMA 342


>gi|1698504|gb|AAB37245.1| rco-1 [Neurospora crassa]
          Length = 604

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 68/197 (34%), Gaps = 22/197 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----FRSMILAPRFSSNGKRAL 273
           RFS + +   Y         ++Y ++T       +  N        I +  FS +GK   
Sbjct: 304 RFSMDGK---YVATGCNRSAQIYDVETGEKLCILQDENIDLTGDLYIRSVCFSPDGKYLA 360

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +  +D+ + ++  D+QS       +    +  S  +S D   I   S   G   + +  
Sbjct: 361 -TGAEDKLIRVW--DIQSRTIRNTFHGHEQDIYSLDFSRDGRTIASGS---GDRTVRLWD 414

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSN 391
                   +   ++        SP    +A          + V    G   ERL   D +
Sbjct: 415 IETGQNTSVLSIEDG-VTTVAISPDKQFVAAGSLDKS---VRVWDMRGYLAERLEGPDGH 470

Query: 392 ---LQAPTWSPSGRSLI 405
              + +  +SP GR+L+
Sbjct: 471 KDSVYSVAFSPDGRNLV 487



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 81/242 (33%), Gaps = 45/242 (18%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            R+WD++ R             + R   H    DIY       G           ++ SG
Sbjct: 368 IRVWDIQSR-------------TIRNTFHGHEQDIYSLDFSRDG----------RTIASG 404

Query: 188 IIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
               ++ + D   G N   L  S +  +     SP++Q VA  + D    +RV+ M   +
Sbjct: 405 SGDRTVRLWDIETGQNTSVL--SIEDGVTTVAISPDKQFVAAGSLD--KSVRVWDMRGYL 460

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-----------QSNATE 295
               +     +  + +  FS +G+  + S   D+ + ++ +                  +
Sbjct: 461 AERLEGPDGHKDSVYSVAFSPDGRNLV-SGSLDKTIKMWELSAPRGIPSSAPPKGGRCIK 519

Query: 296 RLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                    +S + +PDS  ++  S DR     +          + + Q  + S      
Sbjct: 520 TFEGHRDFVLSVALTPDSQWVLSGSKDRG----VQFWDPRTGHTQLMLQGHKNSVISVAP 575

Query: 355 SP 356
           SP
Sbjct: 576 SP 577


>gi|85109447|ref|XP_962921.1| hypothetical protein NCU06205 [Neurospora crassa OR74A]
 gi|61252265|sp|P78706|RCO1_NEUCR RecName: Full=Transcriptional repressor rco-1
 gi|28924565|gb|EAA33685.1| hypothetical protein NCU06205 [Neurospora crassa OR74A]
          Length = 604

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 68/197 (34%), Gaps = 22/197 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----FRSMILAPRFSSNGKRAL 273
           RFS + +   Y         ++Y ++T       +  N        I +  FS +GK   
Sbjct: 304 RFSMDGK---YVATGCNRSAQIYDVETGEKLCILQDENIDLTGDLYIRSVCFSPDGKYLA 360

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +  +D+ + ++  D+QS       +    +  S  +S D   I   S   G   + +  
Sbjct: 361 -TGAEDKLIRVW--DIQSRTIRNTFHGHEQDIYSLDFSRDGRTIASGS---GDRTVRLWD 414

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSN 391
                   +   ++        SP    +A          + V    G   ERL   D +
Sbjct: 415 IETGQNTSVLSIEDG-VTTVAISPDKQFVAAGSLDKS---VRVWDMRGYLAERLEGPDGH 470

Query: 392 ---LQAPTWSPSGRSLI 405
              + +  +SP GR+L+
Sbjct: 471 KDSVYSVAFSPDGRNLV 487



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 81/242 (33%), Gaps = 45/242 (18%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            R+WD++ R             + R   H    DIY       G           ++ SG
Sbjct: 368 IRVWDIQSR-------------TIRNTFHGHEQDIYSLDFSRDG----------RTIASG 404

Query: 188 IIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
               ++ + D   G N   L  S +  +     SP++Q VA  + D    +RV+ M   +
Sbjct: 405 SGDRTVRLWDIETGQNTSVL--SIEDGVTTVAISPDKQFVAAGSLD--KSVRVWDMRGYL 460

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-----------QSNATE 295
               +     +  + +  FS +G+  + S   D+ + ++ +                  +
Sbjct: 461 AERLEGPDGHKDSVYSVAFSPDGRNLV-SGSLDKTIKMWELSAPRGIPSSAPPKGGRCIK 519

Query: 296 RLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                    +S + +PDS  ++  S DR     +          + + Q  + S      
Sbjct: 520 TFEGHRDFVLSVALTPDSQWVLSGSKDRG----VQFWDPRTGHTQLMLQGHKNSVISVAP 575

Query: 355 SP 356
           SP
Sbjct: 576 SP 577


>gi|332306153|ref|YP_004434004.1| peptidase S9, prolyl oligopeptidase active site region [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332173482|gb|AEE22736.1| peptidase S9, prolyl oligopeptidase active site region [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 689

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 7/116 (6%)

Query: 331 MQSNGSDQKRISQD---KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLL 386
           +    S    IS++      S +    SP G+ ++F         + V K  D S  + +
Sbjct: 35  LNQKSSPPMLISREVLLGNPSRYQGRISPDGNSMSFRAPVEGVMNLWVGKIGDFSSAKPI 94

Query: 387 VEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASD 439
            +D+    PT  WS   + + F++ K+GD    L+ +D+ +G  + L       +D
Sbjct: 95  TQDTGRGIPTHFWSLDSQYVFFTQDKNGDENWHLHRVDVGSGEIQDLTPYQGVQAD 150



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 8/131 (6%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFT-- 364
             SPD + + F +  EG   L+V +  + S  K I+QD         WS     + FT  
Sbjct: 60  RISPDGNSMSFRAPVEGVMNLWVGKIGDFSSAKPITQDTGRGIPTHFWSLDSQYVFFTQD 119

Query: 365 KFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           K   E + +  +     + + L       ++    + +  G  ++    +D      +Y 
Sbjct: 120 KNGDENWHLHRVDVGSGEIQDLTPYQGVQADQMHQSEAHPGTIIVGMNDRDAKW-HDMYQ 178

Query: 421 IDLNGRNETLI 431
           +++     TL+
Sbjct: 179 VNVATAERTLL 189



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 46/131 (35%), Gaps = 9/131 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLT--NTLFINISASYSPDSSQIVFES 320
           R S +G         +  M+++   +   ++ + +T      I     +S DS  + F  
Sbjct: 60  RISPDGNSMSFRAPVEGVMNLWVGKIGDFSSAKPITQDTGRGIPT-HFWSLDSQYVFFTQ 118

Query: 321 DREG--KEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGV 375
           D+ G     L+ +     + + ++  Q  +A       +  G +I        +   +  
Sbjct: 119 DKNGDENWHLHRVDVGSGEIQDLTPYQGVQADQMHQSEAHPGTIIVGMNDRDAKWHDMYQ 178

Query: 376 MKKDGSQERLL 386
           +    ++  LL
Sbjct: 179 VNVATAERTLL 189


>gi|302869637|ref|YP_003838274.1| hypothetical protein Micau_5191 [Micromonospora aurantiaca ATCC
           27029]
 gi|302572496|gb|ADL48698.1| hypothetical protein Micau_5191 [Micromonospora aurantiaca ATCC
           27029]
          Length = 285

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 4/72 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             +  G +A+++V  +   D+  VDLQS  + R+        S S SPD  ++ F    +
Sbjct: 218 AVAPGGSKAIVTVSFNGPADVLEVDLQSGQSRRIRQADHA-RSPSVSPDGRKVAFV---D 273

Query: 324 GKEQLYVMQSNG 335
           G  ++ V   + 
Sbjct: 274 GNGRIVVQDLSS 285



 Score = 43.5 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 40/105 (38%), Gaps = 7/105 (6%)

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           R  + +++ + +   ++  + Q     +  P    +P G     T        +  +   
Sbjct: 185 RAEERRVWRLMAASRERGEVKQVGPELHGFPDLAVAPGGSKAIVTVSFNGPADVLEVDLQ 244

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             Q R + +  + ++P+ SP GR + F      D   ++   DL+
Sbjct: 245 SGQSRRIRQADHARSPSVSPDGRKVAFV-----DGNGRIVVQDLS 284


>gi|299117301|emb|CBN75261.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 295

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 66/179 (36%), Gaps = 12/179 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG  K S+ +   DG        +RD+ +    FSP+ + +A    D      V + D  
Sbjct: 112 SGTQKGSVNLWALDGHKKVASMETRDKFVMSVAFSPDNKYLASGGLDG----LVNIFDVE 167

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  +++      I +  FS++G   L +   D  +++Y V   ++     T      +
Sbjct: 168 QAKLHQKLEGHAMPIRSLCFSADG-SLLFTASDDMRVNVYDV-KNTSLVASFTGHTSWVL 225

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIA 362
           S    PD           G +Q   +    + +   + D   +   +   +SP GD + 
Sbjct: 226 SVDCCPDGRHFA----TGGSDQTVKIWDMAAKECVHTFDSAHNNQVWSVAYSPAGDKLV 280


>gi|256422452|ref|YP_003123105.1| hypothetical protein Cpin_3437 [Chitinophaga pinensis DSM 2588]
 gi|256037360|gb|ACU60904.1| WD-40 repeat protein [Chitinophaga pinensis DSM 2588]
          Length = 1160

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 57/299 (19%), Positives = 107/299 (35%), Gaps = 31/299 (10%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           D + I G   + + ++W   +  +   +Y     EK   +       + ++ G    +  
Sbjct: 408 DGRTIAGSSQYGTISAWDLASGKL---LYNKKCAEKRIGSMVFSHDGKQLLIGSGHKAAI 464

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V  +DGA  R     RD I++   FS N   VA A+ D        + + R     + I 
Sbjct: 465 VDAKDGAIRRNFDLHRD-IIYAVAFSRNDSLVATASQDS----TARIWNARTGEVIREIT 519

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSP 311
                 L   FS N ++ L+    D  + + SV   +        L+  L     A +S 
Sbjct: 520 -CSGWALGVDFSHNARQLLVVA--DNEIWVKSVPGAATIMHIALPLSYGL---TGAVFSN 573

Query: 312 DSSQIVFESDREGKEQLYVMQSN-------GSDQKRISQDK--EASYFDPVWSPQGDLIA 362
           D   I+  ++  G   +Y + +        GS    I+ +   + +      SP G+ IA
Sbjct: 574 DDKYIITTAE-SGFVCIYNVSTGKLLHELHGSTPAAIATETRSDNTMDALALSPDGNKIA 632

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            T     +  +  +    +   LL     +   ++S  G+ L        D  + ++ I
Sbjct: 633 -TGRGDGRVEVWDIHTGKALFPLLGHTDYVHFLSFSADGKYL---TSLSKDRRAFIWDI 687



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 64/204 (31%), Gaps = 29/204 (14%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                + +  FS + +              V + D                +    FS +
Sbjct: 28  GHAGFINDLSFSKDGK----MAVTAGSDRTVKIWDVNTGLILADCQGHTETVNEVEFSPD 83

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDR---- 322
            K   IS  +D+   I+ V        RL +   I    S + D S+I+    SD     
Sbjct: 84  NKWI-ISASQDQTARIWEVS-SGKEKLRLRDKYSIE-HVSVNYDGSRIITTAVSDYIRLC 140

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +GK   ++                 ++++  +SP G L+  + F      + +       
Sbjct: 141 DGKTGDFICNLLDGK----------NFWNVEFSPDGKLVVASSFDDS---VYIWDASTGV 187

Query: 383 E-RLLVEDSNLQAPTWSPSGRSLI 405
              ++ E+S      +SP    ++
Sbjct: 188 PHTIIKENSLFAH--FSPGSDLIV 209



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 54/310 (17%), Positives = 99/310 (31%), Gaps = 59/310 (19%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+ ++VTG V             +WDV+    +  K    S A        +SD  + 
Sbjct: 202 SPGSDLIVTGAVDS--------SVHIWDVRTGNLV--KTCRGSRA-------RLSDATFS 244

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           S                        +  L V+  +G    +   +   I   P       
Sbjct: 245 S-----------------------DEKQLAVVTTEGDVQLWDVYTGKLIADWPDVGLRPT 281

Query: 225 KVAYATYDDEDILRVYLMD--TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +  +D + +L            R+ K + +F + ++  RFS + ++  +  Q     
Sbjct: 282 SIEFVQHDKQLLLSTKFEAAILLDARSGKILQSFDADLV--RFSPDQEKYAVVAQA--QA 337

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I +V+  S +   L   +  ++ AS    +  I       G   L V        + + 
Sbjct: 338 TIRNVN-DSTSYTSLRGHVSWSVYASSDTANKHIAVCY---GDGSLRVWSLITGMPELLL 393

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWS 398
            D  A     V SP G  IA +   G    I          +LL      +  + +  +S
Sbjct: 394 ADTAAGITRTVISPDGRTIAGSSQYGT---ISAWDLASG--KLLYNKKCAEKRIGSMVFS 448

Query: 399 PSGRSLIFSR 408
             G+ L+   
Sbjct: 449 HDGKQLLIGS 458



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 59/176 (33%), Gaps = 28/176 (15%)

Query: 264 RFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            FS +GK A+ +         D    +   D Q +            +   +SPD+  I+
Sbjct: 37  SFSKDGKMAVTAGSDRTVKIWDVNTGLILADCQGHTETV------NEVE--FSPDNKWII 88

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S     +Q   +    S ++++    + S      +  G  I  T  S     I +  
Sbjct: 89  SASQ----DQTARIWEVSSGKEKLRLRDKYSIEHVSVNYDGSRIITTAVSD---YIRLCD 141

Query: 378 KDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431
                    L++  N     +SP G+ ++ S   D      +Y  D   G   T+I
Sbjct: 142 GKTGDFICNLLDGKNFWNVEFSPDGKLVVASSFDD-----SVYIWDASTGVPHTII 192



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 52/316 (16%), Positives = 93/316 (29%), Gaps = 54/316 (17%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           + +LWDV   K I         A W  +                G   + I FV      
Sbjct: 258 DVQLWDVYTGKLI---------ADWPDV----------------GLRPTSIEFVQHDKQL 292

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +       +  D A    +  S D  L   RFSP+Q+K A        I  V       
Sbjct: 293 LLSTKFEAAILLD-ARSGKILQSFDADLV--RFSPDQEKYAVVAQAQATIRNVN------ 343

Query: 247 DRAPKRIGNFRSMILAPRF-SSN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                   + R  +    + SS+   K   +    D ++ ++S+ +       L +T   
Sbjct: 344 --DSTSYTSLRGHVSWSVYASSDTANKHIAVCY-GDGSLRVWSL-ITGMPELLLADTAAG 399

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                 SPD   I   S + G   +              +  E      V+S  G  +  
Sbjct: 400 ITRTVISPDGRTIA-GSSQYGT--ISAWDLASGKLLYNKKCAEKRIGSMVFSHDGKQLLI 456

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               G      ++       R   +       A  +S +   +  + +   D+ +++++ 
Sbjct: 457 ----GSGHKAAIVDAKDGAIRRNFDLHRDIIYAVAFSRNDSLVATASQ---DSTARIWNA 509

Query: 422 DLNGRNETLINTPAYA 437
              G     I    +A
Sbjct: 510 R-TGEVIREITCSGWA 524



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 45/243 (18%), Positives = 83/243 (34%), Gaps = 30/243 (12%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+G + +S+ + D    N+          L +  FS +++++A  T +      V L D 
Sbjct: 209 VTGAVDSSVHIWDVRTGNLVKTCRGSRARLSDATFSSDEKQLAVVTTEG----DVQLWDV 264

Query: 245 RIDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                 K I ++  + L P    F  + K+ L+S +         +D +S    +     
Sbjct: 265 YTG---KLIADWPDVGLRPTSIEFVQHDKQLLLSTK---FEAAILLDARSGKILQ----S 314

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GD 359
           F      +SPD  +    +      Q  +   N S     +  +    +    S      
Sbjct: 315 FDADLVRFSPDQEKYAVVAQ----AQATIRNVNDSTS--YTSLRGHVSWSVYASSDTANK 368

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            IA     G    + V         LL+ D+   +     SP GR++  S +    +   
Sbjct: 369 HIAVCYGDGS---LRVWSLITGMPELLLADTAAGITRTVISPDGRTIAGSSQYGTISAWD 425

Query: 418 LYS 420
           L S
Sbjct: 426 LAS 428


>gi|297201275|ref|ZP_06918672.1| peptide hydrolase [Streptomyces sviceus ATCC 29083]
 gi|197712863|gb|EDY56897.1| peptide hydrolase [Streptomyces sviceus ATCC 29083]
          Length = 604

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/318 (13%), Positives = 92/318 (28%), Gaps = 44/318 (13%)

Query: 90  KITNPDSIPRFQDWNSLGAQV--LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
           ++  P   P +    +LG      V GR   +    + +      V+  ++ +       
Sbjct: 110 ELAAPGLEPSYPAGAALGRDGRTAVVGRSTDDEGTSIHL------VRTGEEPVEIYRHRE 163

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
            A    ++H                 +  ++ +  +     + ++L V+  DG  +  L 
Sbjct: 164 SAGVGDLSH-----------------DGSLIAIEHTEHGDAMHSALRVVRPDGRAVAELD 206

Query: 208 PSRDQILFEP----RFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +R            F+P +        +         + D           +    + A
Sbjct: 207 DTRGGTEELGLEVLGFAPVDGDTRLLIGHQRRGRWEPLVWDVATGEESDLALDLPGDVGA 266

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             +  +G   LI    +   +++  DL+S   E++         A+  PD S     S  
Sbjct: 267 -EWYPDGTGLLIVHSFEARSELFRYDLESGKLEKVPTPPGSVSGATARPDGSVEYLWS-- 323

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMKKDG 380
                     +      R +  +       + SP    +   + +  G +    V K  G
Sbjct: 324 ---------SAAEPSAVRSTTGEVVLDPPGLRSPGSVPVEDVWVEGPGGRIHALVQKPAG 374

Query: 381 SQERLLVEDSNLQAPTWS 398
           +   L         PTW 
Sbjct: 375 TTGPLPTVFDIHGGPTWH 392



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 59/175 (33%), Gaps = 10/175 (5%)

Query: 260 ILAPRFS---SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +  P ++    +  R+L         ++Y+ D  +    ++T+          SPD + I
Sbjct: 28  VSLPDWAEDAPD--RSLFVSNATGTYELYAWDRATGVQRQVTDRPNGTTDGVLSPDGAWI 85

Query: 317 VFESDREGKE-QLY-VMQSNGSDQKRISQDKEASY-FDPVWSPQGD-LIAFTKFSGEKFA 372
            +  D++G E  ++      G   +  +   E SY         G   +       E  +
Sbjct: 86  WWFDDKDGDEFGVWRRQPFEGGADELAAPGLEPSYPAGAALGRDGRTAVVGRSTDDEGTS 145

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGR 426
           I +++       +     +      S  G  +     + GD   S L  +  +GR
Sbjct: 146 IHLVRTGEEPVEIYRHRESAGVGDLSHDGSLIAIEHTEHGDAMHSALRVVRPDGR 200



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 77/257 (29%), Gaps = 18/257 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +    R   +  P ++ +    +    +      +Y  D R     +++ +  +    
Sbjct: 17  PDWEKRFRAPRVSLPDWAEDAPDRSLFVSNATGTYELYAWD-RATGVQRQVTDRPNGTTD 75

Query: 263 PRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVF 318
              S +G        KD     ++         + L            A+   D    V 
Sbjct: 76  GVLSPDGAWIWWFDDKDGDEFGVWRRQPFEGGADELAAPGLEPSYPAGAALGRDGRTAVV 135

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGV 375
               + +     +   G +   I + +E S      S  G LIA            A+ V
Sbjct: 136 GRSTDDEGTSIHLVRTGEEPVEIYRHRE-SAGVGDLSHDGSLIAIEHTEHGDAMHSALRV 194

Query: 376 MKKDGSQERLL------VEDSNLQAPTWSP-SG-RSLIFSRKKDGDTGSKLYSIDLNGRN 427
           ++ DG     L       E+  L+   ++P  G   L+   ++ G     ++ +     +
Sbjct: 195 VRPDGRAVAELDDTRGGTEELGLEVLGFAPVDGDTRLLIGHQRRGRWEPLVWDVATGEES 254

Query: 428 ETLINTPAYASDPQWVG 444
           +  ++ P      +W  
Sbjct: 255 DLALDLPGDVGA-EWYP 270


>gi|37720868|gb|AAN60571.1| TUP1-like protein [Pichia angusta]
          Length = 322

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 74/223 (33%), Gaps = 32/223 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---------ILAPRFSSN 268
           RFS + + +A        +  V   D     + +   +             I +  FS +
Sbjct: 8   RFSKDGKFLATGCNKLTQVFSVETGDLVARLSDESSASSNGSYDTDTGDLYIRSVCFSPD 67

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQ 327
           GK    +  +D+ + I+  DL +    +    L  +  S  + PD S++V  S   G   
Sbjct: 68  GKFLA-TGAEDKIIRIW--DLATRTIVKYLYGLVQDIYSLDFFPDGSKLVSGS---GDRT 121

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +          ++   E        SP G LIA          + V   +       +
Sbjct: 122 VRIWDVFTGQCS-LTLSIEDGVTTVAASPDGKLIAAGSLDRT---VRVWDANQGFLVERL 177

Query: 388 EDSN---------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +N         + +  ++  G+ +        D   KL+S+
Sbjct: 178 DSANESGNGHMDSVYSVAFTHDGKEIA---SGSLDRTVKLWSL 217



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 17/169 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +N  Y T + D  +    FSP+ + +A    D      + + D       K +      I
Sbjct: 46  SNGSYDTDTGDLYIRSVCFSPDGKFLATGAEDK----IIRIWDLATRTIVKYLYGLVQDI 101

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFE 319
            +  F  +G + + S   D  + I+  D+ +      L+    +   A+ SPD   I   
Sbjct: 102 YSLDFFPDGSKLV-SGSGDRTVRIW--DVFTGQCSLTLSIEDGVTTVAA-SPDGKLIAAG 157

Query: 320 S-DR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           S DR     +  +   V + + +++         S +   ++  G  IA
Sbjct: 158 SLDRTVRVWDANQGFLVERLDSANESG--NGHMDSVYSVAFTHDGKEIA 204


>gi|325122680|gb|ADY82203.1| 6-phosphogluconolactonase [Acinetobacter calcoaceticus PHEA-2]
          Length = 411

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/280 (12%), Positives = 82/280 (29%), Gaps = 43/280 (15%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF------ 256
              S          S + + +    Y+ +D        L         +++ N       
Sbjct: 137 TVDSHGGHPTHATISLDGKFLFVSNYSAFDKGRGGVAVLPILPNGHLGEKVQNIVFEEGS 196

Query: 257 --------RSMILAPRFSSNGKRALISVQKDEAMDIYSVD--------LQSNATERLTNT 300
                        +  FS +GK    S   ++ +  +  +          +N     T+ 
Sbjct: 197 GHVKGRQESGHAHSTTFSPDGKYLYASDLGNDKVYAFRYNPNKAQPLEADTNRDVTFTHG 256

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------QDKEASYFD 351
                   +SP+       ++   + ++          K+++           +  S   
Sbjct: 257 SGP-RHMVFSPNGKHAYVTAEM--RSEIVTFNVQDGHLKKVAELKLIHEDKTPEFKSASG 313

Query: 352 PVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFS 407
            + SP G   IA  + +  K  +  ++++G   + +V  +N   P   ++  +G+ L  +
Sbjct: 314 IILSPNGKYVIAANRGADNKLLVFKIQQNGLLAKPVVYKANGIEPRAFSFDATGKYLYVT 373

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
                     L+  D            A  S P  + F +
Sbjct: 374 NVY--TNNISLFRFDAKNGTLKPAGDAAKISTPTDIKFFN 411



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 70/202 (34%), Gaps = 38/202 (18%)

Query: 262 APRF---SSNGKRALISVQKDEAMDIYSVDLQSNATERL-T--NTLFINISASYSPDSS- 314
           +P +   S +G R   +  ++    + ++ +Q+   E L T  +       A+ S D   
Sbjct: 98  SPSWIVKSKDG-RFAYTTNEENEGAVTALSIQNGKVEVLNTVDSHGGHPTHATISLDGKF 156

Query: 315 -----QIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASY----------FDPVWSPQ 357
                   F+  R G   L ++ +   G   + I  ++ + +              +SP 
Sbjct: 157 LFVSNYSAFDKGRGGVAVLPILPNGHLGEKVQNIVFEEGSGHVKGRQESGHAHSTTFSPD 216

Query: 358 GDLIAFTKFSGEKFAIGVMKK--------DGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           G  +  +    +K                D +++      S  +   +SP+G+       
Sbjct: 217 GKYLYASDLGNDKVYAFRYNPNKAQPLEADTNRDVTFTHGSGPRHMVFSPNGKH----AY 272

Query: 410 KDGDTGSKLYSIDL-NGRNETL 430
              +  S++ + ++ +G  + +
Sbjct: 273 VTAEMRSEIVTFNVQDGHLKKV 294


>gi|323450852|gb|EGB06731.1| hypothetical protein AURANDRAFT_28597 [Aureococcus anophagefferens]
          Length = 325

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 70/207 (33%), Gaps = 17/207 (8%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +A ++ D   +LR +   +        I           F  + K  +IS  +   
Sbjct: 64  DGKTIATSSID--SVLRFWNPLSESSEPVGFIDAGPVEAWTLSFHPDDKT-VISGTQKGT 120

Query: 282 MDIYSVDLQSNATER---LTNTLFINI---SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           ++++  D++S    +    ++   ++    S +YSPD +QI           + V  +  
Sbjct: 121 VNVW--DVESCQKTQSFKGSSGEGVDAFVMSVAYSPDGAQIA---TGGLNGAINVWDAKS 175

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            D+    +  E       WSP G ++          A  V +     E      S     
Sbjct: 176 GDKAAEFEGHELPVRSISWSPDGQVLLSACDDSTVQAYDVARPGKPFETFYAHRSWALGV 235

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +SP  R          D   K++ ++
Sbjct: 236 AFSPDNRHFA---TCSSDRTVKIWDLN 259



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 58/147 (39%), Gaps = 6/147 (4%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + +G +  ++ V D    +        +  +    +SP+ Q     +  D+  ++ Y +
Sbjct: 158 QIATGGLNGAINVWDAKSGDKAAEFEGHELPVRSISWSPDGQ--VLLSACDDSTVQAYDV 215

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             R  +  +     RS  L   FS + +        D  + I+ +++++   E +     
Sbjct: 216 -ARPGKPFETFYAHRSWALGVAFSPDNRHFATCSS-DRTVKIWDLNMKTCVAE-MMGHQD 272

Query: 303 INISASYSPDSSQIVFESDREGKEQLY 329
                +YSPD  ++   +D +G  Q+Y
Sbjct: 273 QVWEVAYSPDGGELCSCAD-DGAVQVY 298


>gi|171689274|ref|XP_001909577.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944599|emb|CAP70710.1| unnamed protein product [Podospora anserina S mat+]
          Length = 867

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/244 (19%), Positives = 83/244 (34%), Gaps = 39/244 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++P+  K+   T    + +RVY   T  D  P  + + +   +A   S    +  ++  
Sbjct: 24  AYTPDGTKL--VTVGSNNTIRVY--KTGSDGEPDNVDDCQEQNVAVSTS---NKFFVAGS 76

Query: 278 KDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +D  +  YS  L++N  +RL T T       + SPD       SD     +L V   N  
Sbjct: 77  EDGTLAYYS--LETNMFDRLLTRTSLPVRDVALSPDDKWCAVASD-----ELTVKLVNME 129

Query: 337 DQKRISQDKEASYFDPVWS--PQGDLIAFTKFSGEKFAIGVMKK-----------DGSQE 383
           D   +   KE        S  P+G ++A +  +G    I +              DG   
Sbjct: 130 DTTNLLTLKEHGEQTKHISFDPKGTMLAVSCTNG---IIYIYSLTADHPELIRKVDGVIG 186

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP--- 440
           R+  +        W P GR+              +  +  N   +  + +  +  D    
Sbjct: 187 RVQTDSEASTKVVWHPDGRAFAVPT-----PTRDIQVVSKNDWEKQRVFSNGHEGDVTAL 241

Query: 441 QWVG 444
            W  
Sbjct: 242 AWSP 245



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/234 (17%), Positives = 70/234 (29%), Gaps = 23/234 (9%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            S   FV+ S    +   SL     D      L       + +   SP+ +  A A+   
Sbjct: 67  TSNKFFVAGSEDGTLAYYSLETNMFD-----RLLTRTSLPVRDVALSPDDKWCAVAS--- 118

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--- 290
            D L V L++         +           F   G    +S   +  + IYS+      
Sbjct: 119 -DELTVKLVNMEDTTNLLTLKEHGEQTKHISFDPKGTMLAVSCT-NGIIYIYSLTADHPE 176

Query: 291 -----SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                     R+      +    + PD     F      ++   V +++   Q+  S   
Sbjct: 177 LIRKVDGVIGRVQTDSEASTKVVWHPDGR--AFAVPTPTRDIQVVSKNDWEKQRVFSNGH 234

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           E       WSP G L+A    +G+   + +            E  N+    W P
Sbjct: 235 EGDVTALAWSPNGALLA---SAGKDRKLLIWSTKDQSVVARYEYPNVVDIAWHP 285


>gi|326427685|gb|EGD73255.1| hypothetical protein PTSG_04968 [Salpingoeca sp. ATCC 50818]
          Length = 565

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 98/279 (35%), Gaps = 30/279 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPS--RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           +  +  +L +   DG   + ++ +  R+  ++   FSP+  +V   +          L  
Sbjct: 280 TAGLDKTLRIFQVDGRRNKLMSSTFVRNLPMYSAAFSPDGTEVI-MSGRRPFFYSFDLET 338

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
             +   P   G     +     S + +    +  +D       + L S  T++L  TL +
Sbjct: 339 GSVTCTPYLAGRKEQSLERMCLSPDNQFITFTG-RDGH-----MLLVSRKTKQLIGTLKM 392

Query: 304 NIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGD 359
           N S   A++S DS  + + +  EG  ++Y+   N  D   + +D           SP   
Sbjct: 393 NQSCRKAAFSRDSRYL-YTTGNEG--RVYIWDMNTRDCINVFEDEGCQIATAIAVSPDNK 449

Query: 360 LIAFTKFSG--EKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            IA    +G    +    M     + R   L   + +   +++  G S++    +     
Sbjct: 450 SIAVGSDAGVVNVYDDVCMSSRAPKPRKSFLNLTTTIDNLSFNHDG-SVLCMSSRMRRNA 508

Query: 416 SKLYSI---------DLNGRNETLINTPAYASDPQWVGF 445
            +L  +              N    ++ A++   +++  
Sbjct: 509 IRLVHMPSLTVFKNWPSTRTNLRFTHSQAFSPHGKYLAL 547



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 67/195 (34%), Gaps = 23/195 (11%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A  T   +  LR++ +D R ++           + +  FS +G   ++S ++      YS
Sbjct: 277 AILTAGLDKTLRIFQVDGRRNKLMSSTFVRNLPMYSAAFSPDGTEVIMSGRR---PFFYS 333

Query: 287 VDLQSNATERLTNTLFINISAS-----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            DL++ +    T  L      S      SPD+  I F   R+G   L          K++
Sbjct: 334 FDLETGSVT-CTPYLAGRKEQSLERMCLSPDNQFITFT-GRDGHMLLV-----SRKTKQL 386

Query: 342 --SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--- 396
             +     S     +S     +     +G +  + +   +      + ED   Q  T   
Sbjct: 387 IGTLKMNQSCRKAAFSRDSRYLY---TTGNEGRVYIWDMNTRDCINVFEDEGCQIATAIA 443

Query: 397 WSPSGRSLIFSRKKD 411
            SP  +S+       
Sbjct: 444 VSPDNKSIAVGSDAG 458



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 28/180 (15%), Positives = 59/180 (32%), Gaps = 24/180 (13%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNG 269
           +Q   +  FS + + +    Y   +  RVY+ D           +    +  A   S + 
Sbjct: 393 NQSCRKAAFSRDSRYL----YTTGNEGRVYIWDMNTRDCINVFEDEGCQIATAIAVSPDN 448

Query: 270 KRALISVQKDEAMDIYSVD---LQSNATE------RLTNTLFINISASYSPDSSQIVFES 320
           K   +     +A  +   D   + S A +       LT T+    + S++ D S +   S
Sbjct: 449 KSIAV---GSDAGVVNVYDDVCMSSRAPKPRKSFLNLTTTI---DNLSFNHDGSVLCMSS 502

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASY---FDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            R  +  + ++        +       +        +SP G  +A     G+   + +  
Sbjct: 503 -RMRRNAIRLVHMPSLTVFKNWPSTRTNLRFTHSQAFSPHGKYLALGNDGGQVPLLRLNH 561


>gi|62079251|ref|NP_001014284.1| WD repeat domain 8 [Rattus norvegicus]
 gi|51980423|gb|AAH82062.1| WD repeat domain 8 [Rattus norvegicus]
          Length = 461

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 81/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D     I  L    DQI     +S +   +         I++V+ ++      
Sbjct: 28  QYRLVVRDVTTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYRRGIVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACQQGLTF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ ++ + +   +     R             W+P G ++A    +  
Sbjct: 142 TRDGRYLALAERRDCRDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-AWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKD 411
           ++ + +   DG   RLL           +++  WSPS + L       
Sbjct: 201 EYKVLLYSLDG---RLLSAYCAYEWSLGIKSVAWSPSSQFLAIGSYDG 245



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 9/158 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           RFS +GK     VQ      +   D+ +    +L   L       +S DS  I+    R 
Sbjct: 15  RFSPDGKYLASCVQ----YRLVVRDVTTLQILQLYTCLDQIQHIEWSADSLFILCAMYRR 70

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  Q++ ++    +      +  A      WSP G  I     +     I V        
Sbjct: 71  GIVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSV 126

Query: 384 RLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +       Q  T++  GR L  + ++D      ++ 
Sbjct: 127 SYIKYPKACQQGLTFTRDGRYLALAERRDCRDYVSIFV 164


>gi|116625140|ref|YP_827296.1| hypothetical protein Acid_6078 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228302|gb|ABJ87011.1| hypothetical protein Acid_6078 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 433

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 47/166 (28%), Gaps = 10/166 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK- 278
           +P  + +A+    D       LM      + +RI            S +    L + ++ 
Sbjct: 34  APRYEPMAWMNGHDRFPAGSSLMLI-SGTSRRRIAPDFYASADGAVSFDASHILFAGKRT 92

Query: 279 -DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 I+        T  +T      +   Y PD  ++VF         +      G  
Sbjct: 93  VSAHWQIWEAPRTGGTTRPITPGDADCVRPRYLPDG-RVVFTRISPTGSAIEAAPLEGGK 151

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             R++        D V    G  I F         I  +  DG+  
Sbjct: 152 SVRLTFAPGWHLTDDVL-RDGR-ILFETAG----EIFTVYPDGTGV 191



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 8/111 (7%)

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLV 387
           +M  +G+ ++RI+ D  AS  D   S     I F   +     + I    + G   R + 
Sbjct: 55  LMLISGTSRRRIAPDFYASA-DGAVSFDASHILFAGKRTVSAHWQIWEAPRTGGTTRPIT 113

Query: 388 -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAY 436
             D++   P + P GR ++F+R     TGS + +  L  G++  L   P +
Sbjct: 114 PGDADCVRPRYLPDGR-VVFTRIS--PTGSAIEAAPLEGGKSVRLTFAPGW 161



 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 52/183 (28%), Gaps = 31/183 (16%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            I+ D Y S  G      S ILF  +  VS      +    R G   R +TP  D     
Sbjct: 65  RIAPDFYASADGAVSFDASHILFAGKRTVSA--HWQIWEAPRTGGTTRPITPG-DADCVR 121

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--- 273
           PR+ P+  +V +                       R+       L      +G+      
Sbjct: 122 PRYLPDG-RVVFTRISPTG--SAIEAAPLEGGKSVRLTFAPGWHLTDDVLRDGRILFETA 178

Query: 274 ---ISV----------------QKDEAMDIYSVDL---QSNATERLTNTLFINISASYSP 311
               +V                Q+  A  + + D+    S    R T+     +S    P
Sbjct: 179 GEIFTVYPDGTGVESLRCDHGRQRTGARQLSTGDVIFTSSGRLARFTSARAEQMSDVTQP 238

Query: 312 DSS 314
           D  
Sbjct: 239 DGD 241


>gi|291436176|ref|ZP_06575566.1| acyl-peptide hydrolase [Streptomyces ghanaensis ATCC 14672]
 gi|291339071|gb|EFE66027.1| acyl-peptide hydrolase [Streptomyces ghanaensis ATCC 14672]
          Length = 654

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 91/288 (31%), Gaps = 50/288 (17%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN------IRYLTPSRDQILFEPRF 219
           +  E+G+    +   +    S + +  L  +  DG+       +R L+  R + +  PR 
Sbjct: 135 LLPERGEVWCVLEEFTGEGPSDVRR-VLAAVPLDGSAAEDRGAVRELSDDRHRFVTGPRL 193

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P+ ++ A+  +D   +                               +G   L++    
Sbjct: 194 APDGRRAAWLAWDHPRMPW-----------------------------DGTELLLADVTP 224

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +        +     E +           ++ D  ++++ SDR G   LY         +
Sbjct: 225 DGTLRDVRTVAGGPEESVAQVD-------WTHDG-RLLYASDRTGWWNLYR-DGEALCPR 275

Query: 340 RISQDKEASYFDPVW-SP-QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                         W +P    LIA     G   A+GV+  +  +            PT 
Sbjct: 276 EEEFGGPLWKLGSRWFAPLDSGLIAVVHGRGAA-ALGVLDPETGEVVDAAGPWTEFTPTL 334

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
           +  G  ++ +      +  ++  +D   GR   + +    A DP +  
Sbjct: 335 AAHGERVV-AVGAGPRSAHEVVELDTRTGRARVIGSAHQDAVDPAYYP 381


>gi|256425195|ref|YP_003125848.1| hypothetical protein Cpin_6241 [Chitinophaga pinensis DSM 2588]
 gi|256040103|gb|ACU63647.1| hypothetical protein Cpin_6241 [Chitinophaga pinensis DSM 2588]
          Length = 919

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 100/314 (31%), Gaps = 29/314 (9%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
            K+      +  ++ HT+++  Y            +  +   +           ++D  G
Sbjct: 268 AKEQRKPGKALLEVPHTVTNYKYIYPVKPGEWLIYKDSYQQLAG--------FYLLDSSG 319

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYA------TYDDEDILRVYLMDTRIDRAPKRIG 254
                   +R  + F+  FS    ++ +        +  +D   V   D    +      
Sbjct: 320 ---HQKLVTRPGMNFDDYFSYRNGRLVWTEARFHPRWSWKDYSVVKTYDMSTGKTATL-- 374

Query: 255 NFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATE-RLTN-TLFINISASYSP 311
              +   +P  S++GKR ++      +   +  +D ++ A    L N   +      +S 
Sbjct: 375 THTTRYFSPDISADGKRIVVVSTLTSQRYGLQILDARTGALIDSLPNPDNWYYTYPKFSA 434

Query: 312 DSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           D   ++    + +G+  +        +++ ++         P        + +T    + 
Sbjct: 435 DEQWVISNVRNNQGEMAMLRQSVKTGERELLTPFSFTVLGIPSVGQD--TVYYTAAYKDV 492

Query: 371 FAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +  +     +   +   SN +       S + +I+S    G  G  LY+  L  +   
Sbjct: 493 DNVYALTLSDKKIWQVTAHSNGVLHAAVDNSSQQVIYSAF--GTKGYALYAAPLAPKEWQ 550

Query: 430 LINTPAYASDPQWV 443
            I+T        W+
Sbjct: 551 PIDTGRNYHS-AWL 563


>gi|195644660|gb|ACG41798.1| WD-repeat protein 57 [Zea mays]
          Length = 335

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 79/266 (29%), Gaps = 31/266 (11%)

Query: 186 SGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG     + +    G      +       + + +++ +  ++  A+ D      V + D 
Sbjct: 62  SGSHDKDIFLWYVHGECKNFMVLRGHKNAILDLQWTTDGTQIISASPDK----TVRVWDV 117

Query: 245 RIDRAPKRIGNFRSMILA--PR--FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              +  K++    S + +  P   +       ++S   D    ++  DL+     +    
Sbjct: 118 ETGKQVKKMAEHSSFVNSCCPARKWPP----LVVSGSDDGTAKLW--DLRQRGAIQTLPD 171

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +   + S+S  + + VF    +    +       ++     +  +        SP G  
Sbjct: 172 KYQITAVSFSEAADK-VFTGGLD--NDVKWWDLRKNETTEYLKGHQDMITGMQLSPDGSY 228

Query: 361 IAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDGD 413
           +       E   + +     +    + L    +         +WSP  R +       G 
Sbjct: 229 LLTNAMDNELKIWDLRPYAPENRNIKTLTGHQHNFEKNLLKCSWSPDNRKV-----TAGS 283

Query: 414 TGSKLYSIDLNGRNETLINTPAYASD 439
               +Y  D   R   L   P +   
Sbjct: 284 ADRMVYIWDTTSR-RILYKLPGHNGS 308


>gi|149714950|ref|XP_001494960.1| PREDICTED: achalasia, adrenocortical insufficiency, alacrimia
           (Allgrove, triple-A) [Equus caballus]
          Length = 545

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 68/198 (34%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  DD     + + +      P      +  + A  +       L    
Sbjct: 158 AWHPHTNKFAVALLDD----SIRVYNANSTTVPSLKHRLQRNVAALAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAVL 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  +  T  S   F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVLATTPS-AVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGNRLLFT 346



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 69/240 (28%), Gaps = 49/240 (20%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+  KV   T     + RV+          +R            +S +G R L +V  
Sbjct: 295 WSPDGSKVLATT--PSAVFRVWEAQMWT---CERWPTLSGRCQTGCWSPDGNRLLFTVLG 349

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYS------PDSSQIVFESDREGKEQLYVMQ 332
           +  +   S   +     R+       I A  S      PD  + +      G+       
Sbjct: 350 EPLIYSLSFPERGEGKGRVGGAKSATIVADLSETTIQTPDGERRL-----GGEAHTMAWD 404

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTKFSGEKFAIG----VMKKDGSQERLL 386
            +G     + +              G  +   F   +   F +     +  + G+Q +L+
Sbjct: 405 PSGERLAVLLKGNPRVQ-------DGKPVILLFRTRNSPVFELLPCGIIQGEPGAQAQLI 457

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
                   P++               + G+ L      GR   +      A  P++   +
Sbjct: 458 T-----FHPSF---------------NKGALLSVCWSTGRIAHIPLYFVNAQFPRFSPAL 497


>gi|109898123|ref|YP_661378.1| peptidase S9, prolyl oligopeptidase active site region
           [Pseudoalteromonas atlantica T6c]
 gi|109700404|gb|ABG40324.1| peptidase S9, prolyl oligopeptidase active site region
           [Pseudoalteromonas atlantica T6c]
          Length = 731

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 37/99 (37%), Gaps = 4/99 (4%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPT--WSPSG 401
              + +    SP G+ ++F         + V    D +    +  D+    PT  WS   
Sbjct: 95  GNPTRYQGRISPDGNKMSFRAPVDGVMNLWVGNLGDFNSAVPITHDTGRGIPTHFWSLDS 154

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASD 439
           + + F + KDGD    L+ ID+   N   L       +D
Sbjct: 155 QYVFFIQDKDGDENWHLHRIDIASGNIRDLTPYAGVQAD 193



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 46/131 (35%), Gaps = 8/131 (6%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             SPD +++ F +  +G   L+V    + +    I+ D         WS     + F + 
Sbjct: 103 RISPDGNKMSFRAPVDGVMNLWVGNLGDFNSAVPITHDTGRGIPTHFWSLDSQYVFFIQD 162

Query: 367 SGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPS----GRSLIFSRKKDGDTGSKLYS 420
                 + +  +       R L   + +QA     +    G  ++    +D      +Y 
Sbjct: 163 KDGDENWHLHRIDIASGNIRDLTPYAGVQADQMHQNVNHPGTIIVGMNDRDAKW-HDVYQ 221

Query: 421 IDLNGRNETLI 431
           +++     TL+
Sbjct: 222 VNVATGERTLL 232



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 47/131 (35%), Gaps = 9/131 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTN--TLFINISASYSPDSSQIVFES 320
           R S +G +       D  M+++  +L   N+   +T+     I     +S DS  + F  
Sbjct: 103 RISPDGNKMSFRAPVDGVMNLWVGNLGDFNSAVPITHDTGRGIPT-HFWSLDSQYVFFIQ 161

Query: 321 DREG--KEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGV 375
           D++G     L+ +     + + ++     +A       +  G +I        +   +  
Sbjct: 162 DKDGDENWHLHRIDIASGNIRDLTPYAGVQADQMHQNVNHPGTIIVGMNDRDAKWHDVYQ 221

Query: 376 MKKDGSQERLL 386
           +     +  LL
Sbjct: 222 VNVATGERTLL 232


>gi|149024763|gb|EDL81260.1| similar to Wdr8 protein [Rattus norvegicus]
          Length = 425

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 81/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D     I  L    DQI     +S +   +         I++V+ ++      
Sbjct: 28  QYRLVVRDVTTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYRRGIVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACQQGLTF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ ++ + +   +     R             W+P G ++A    +  
Sbjct: 142 TRDGRYLALAERRDCRDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-AWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKD 411
           ++ + +   DG   RLL           +++  WSPS + L       
Sbjct: 201 EYKVLLYSLDG---RLLSAYCAYEWSLGIKSVAWSPSSQFLAIGSYDG 245



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 9/158 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           RFS +GK     VQ      +   D+ +    +L   L       +S DS  I+    R 
Sbjct: 15  RFSPDGKYLASCVQ----YRLVVRDVTTLQILQLYTCLDQIQHIEWSADSLFILCAMYRR 70

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  Q++ ++    +      +  A      WSP G  I     +     I V        
Sbjct: 71  GIVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSV 126

Query: 384 RLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +       Q  T++  GR L  + ++D      ++ 
Sbjct: 127 SYIKYPKACQQGLTFTRDGRYLALAERRDCRDYVSIFV 164


>gi|71280735|ref|YP_270659.1| hypothetical protein CPS_4001 [Colwellia psychrerythraea 34H]
 gi|71146475|gb|AAZ26948.1| conserved domain protein [Colwellia psychrerythraea 34H]
          Length = 299

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 84/237 (35%), Gaps = 21/237 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR-----IDRAPKRIGNFRSMI 260
           +     +  F   FSP+  +V ++    E    +Y            +  K     ++  
Sbjct: 51  IVSINGRYDFGISFSPDLDEVYFSVQPKEGTADIYFSKIEDKKWKAIQKAKFTKGQKAGE 110

Query: 261 LAPRFSSNGKRALIS-----VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           + P   ++GKR   +        +E   +  +D   +   +L + +  +   + +   + 
Sbjct: 111 MEPFVRADGKRIYFTGYSSDFSGEEIWYVDRLDKGWSNAIKLDSPINDDDVMNLTQAKNG 170

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---SGEKFA 372
            VF  +R  ++  Y    NG   K    D E      + S Q  L+   +          
Sbjct: 171 DVFYDNRSKRKMYYSSSKNGGFPKVQEVDVEIGSHAFISSSQDYLLVQAQNKEDQKRNSD 230

Query: 373 IGVM--KKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           I V   +KDG+  +       +  D + + P  +P G+ L FSR  +    + LY +
Sbjct: 231 IYVYFKEKDGAWTKPINLGNTVNSDFHERVPGVTPDGKYLFFSRYNEEGGIANLYWV 287


>gi|108803624|ref|YP_643561.1| hypothetical protein Rxyl_0781 [Rubrobacter xylanophilus DSM 9941]
 gi|108764867|gb|ABG03749.1| hypothetical protein Rxyl_0781 [Rubrobacter xylanophilus DSM 9941]
          Length = 388

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 67/220 (30%), Gaps = 38/220 (17%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D  +      +        +P +S +G R   +V      D Y V+  + A         
Sbjct: 41  DLGLGPGVHPLSFGPGYKGSPAWSPDGTRIAFTV------DGYVVEKPAGAER------- 87

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               A++           +      L  +  +G D   I   ++      V       +A
Sbjct: 88  ----AAWRATGEIGARRVEWLSGNSLAALDPDGKDLYLIGPGEDGLRARRVS---ERAVA 140

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-------------TWSPSGR-SLIFSR 408
           F+   G    I  +++  S   L +       P             + SP GR +L+ S 
Sbjct: 141 FSPLPGSGEMIAALERGPSGSTLALSMGGQLVPYAGVRVPGRVTAISVSPDGRLALLASA 200

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYA----SDPQWVG 444
              G  G ++Y+ DL  R    +            PQW G
Sbjct: 201 PPAGGEGPEIYAFDLESRGLERVARLESGLKVLGAPQWTG 240



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 74/259 (28%), Gaps = 55/259 (21%)

Query: 217 PRFSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           P +SP+  ++A+       +              +   +R+       LA     +GK  
Sbjct: 61  PAWSPDGTRIAFTVDGYVVEKPAGAERAAWRATGEIGARRVEWLSGNSLA-ALDPDGKDL 119

Query: 273 LISVQKDEAMDIYSV--------DLQSNAT-------------------ERLTNTLFINI 305
            +    ++ +    V         L  +                      +L     + +
Sbjct: 120 YLIGPGEDGLRARRVSERAVAFSPLPGSGEMIAALERGPSGSTLALSMGGQLVPYAGVRV 179

Query: 306 SA-----SYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWS 355
                  S SPD    +  S         ++Y         +R+++ +        P W+
Sbjct: 180 PGRVTAISVSPDGRLALLASAPPAGGEGPEIYAFDLESRGLERVARLESGLKVLGAPQWT 239

Query: 356 PQGDLIAFT--------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSL 404
             G  I F         + S   + +  +     +  L  +     A +    SP G  L
Sbjct: 240 --GRGIYFVAKTEAAPKRESPGLYGLYRIPPGSDRPELDPDVGRDFAASGIRVSPDGSRL 297

Query: 405 IFSRKKDGDTGSKLYSIDL 423
               +   ++ + LY +DL
Sbjct: 298 AIIGRLHPNSPANLYVLDL 316


>gi|67925400|ref|ZP_00518748.1| hypothetical protein CwatDRAFT_1318 [Crocosphaera watsonii WH 8501]
 gi|67852753|gb|EAM48164.1| hypothetical protein CwatDRAFT_1318 [Crocosphaera watsonii WH 8501]
          Length = 501

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 76/218 (34%), Gaps = 29/218 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----SSNGKRALIS 275
           S   +++AY         + Y +     R   R  N     + P      S +   A I 
Sbjct: 93  SWAGRRLAYTVETPVPYGQTYTVQLSEAREKFRKNNKAGQEMEPFVGTFQSRDRALAYIG 152

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-------KEQL 328
            Q +E   +   ++       LT    + ++  + P+ ++I+F + +EG       K +L
Sbjct: 153 TQGEEKGKLVFYNITQQHKRMLTPPDLVVMNFEFYPEGNRILFSAYKEGLGIDGLRKLKL 212

Query: 329 YVM------------QSNGSDQKRISQDKEASYFDPVWSPQGDLIA---FTKFSGEKFAI 373
           Y +             +     + I  ++         S  G+ I      + +   F +
Sbjct: 213 YTVTTGVNNGVEDSNNNPPGKIEEILDNETYQNNQFDLSADGETIVIQRVNRQNPADFDL 272

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            +++K    ERL V     +    +P  ++L  +R + 
Sbjct: 273 WIVRKGEKAERLRVTGGYFE---ITPDNQALAVARGEG 307


>gi|302852321|ref|XP_002957681.1| intraflagellar transport protein IFT80 [Volvox carteri f.
           nagariensis]
 gi|300256975|gb|EFJ41230.1| intraflagellar transport protein IFT80 [Volvox carteri f.
           nagariensis]
          Length = 764

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 58/166 (34%), Gaps = 17/166 (10%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           +R  R  K I   R   ++ R+S +G     +  +D ++ I+S +        L      
Sbjct: 91  SRTGRVEKSIEAHRGACISLRWSFDGTALA-TAGEDGSVKIWSRN--GMLRSTLAQADSP 147

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S  ++ D  Q+ + +       + +     + ++   +  +       WSP   LI  
Sbjct: 148 VYSIVWAYDCDQLCYCT----GSNVVIKSLTSNAKQNAWKAHDGVVLKVDWSPINHLIV- 202

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI 405
               GE     V    G   RLL +      P    +WSPSG    
Sbjct: 203 --SGGEDCKYKVWDSFG---RLLYQSGIFDYPVTSVSWSPSGEQFA 243



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 68/216 (31%), Gaps = 16/216 (7%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R  F   ++ +     S+ +  R+G  +R      D  ++   ++ +  ++ Y T     
Sbjct: 111 RWSFDGTALATAGEDGSVKIWSRNGM-LRSTLAQADSPVYSIVWAYDCDQLCYCT----- 164

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              V +     +           ++L   +S      ++S  +D    ++  D       
Sbjct: 165 GSNVVIKSLTSNAKQNAWKAHDGVVLKVDWSPI-NHLIVSGGEDCKYKVW--DSFGRLLY 221

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +     +   S S+SP   Q    S       L +    G    ++      S     W+
Sbjct: 222 QSGIFDYPVTSVSWSPSGEQFAVGSFNS----LQLCDRMGWAYSKVHLKDAGSIMSLSWT 277

Query: 356 PQGDLIAFTKFSGEKFAIGVMKK---DGSQERLLVE 388
                +A    SG      V+     DG  +  +V+
Sbjct: 278 ADSTQLAGAGGSGSVVFGQVVDLTLEDGKMQVTVVD 313


>gi|297281612|ref|XP_001084011.2| PREDICTED: WD repeat-containing protein 8 isoform 4 [Macaca
           mulatta]
          Length = 441

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/228 (16%), Positives = 82/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D +   I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDVNTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYKRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACLQGITF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + +   +     R             W+P G ++A    S  
Sbjct: 142 TRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-VWDSCL 200

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKD 411
           ++ I +   DG   RLL   S  +      +  WSPS + L       
Sbjct: 201 EYKILLYSLDG---RLLSAYSAYEWSLGIKSVAWSPSSQFLAVGSYDG 245



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 9/157 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK     VQ      +   D+ +    +L   L       +S DS  I+    + G
Sbjct: 16  FSPDGKYLASCVQ----YRLVVRDVNTLQILQLYTCLDQIQHIEWSADSLFILCAMYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++    +      +  A      WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSVS 127

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +       Q  T++  GR +  + ++D      ++ 
Sbjct: 128 YIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIFV 164


>gi|170587927|ref|XP_001898725.1| Chromatin assembly factor 1 subunit B [Brugia malayi]
 gi|158592938|gb|EDP31533.1| Chromatin assembly factor 1 subunit B, putative [Brugia malayi]
          Length = 523

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 60/198 (30%), Gaps = 52/198 (26%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT------------------ 294
           +   R+ +   RFS +G+    S   D  + I+ +D  S                     
Sbjct: 80  LVGHRTTVNVARFSPDGQFLA-SGDCDGCIIIWKIDTNSPNLISPRDDDFPSNVENWVRY 138

Query: 295 -ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--D 351
              L++   I  S  +SPDS +    S+    E   + ++N    +R+   +    F   
Sbjct: 139 KTPLSHNSDI-CSLCWSPDSKRFAIVSN---DESFAIYEANTG--RRLWHMRSYRRFPNG 192

Query: 352 PVWSPQGDLIAFTKFS---------GEKFAIGVM------------KKDGSQERLLVEDS 390
             W P+G  I                    I +                    +L  +D 
Sbjct: 193 VAWDPRGKYIVTMSTDRKLDILCGKKGTRLICIQNVRLPETVLRKSNLTVGSYKLFHDDQ 252

Query: 391 NLQA---PTWSPSGRSLI 405
            +     P +SP G  LI
Sbjct: 253 LMSFSRIPDFSPDGELLI 270


>gi|119488361|ref|XP_001262684.1| wd-repeat protein [Neosartorya fischeri NRRL 181]
 gi|119410842|gb|EAW20787.1| wd-repeat protein [Neosartorya fischeri NRRL 181]
          Length = 1718

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 89/249 (35%), Gaps = 29/249 (11%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKV 226
             E   F    L  ++ + SG    ++ + D   G  +R L       +    FS    ++
Sbjct: 1200 HEDAVFYVGFLRGTDRLASGSFDGTVKIWDPAIGKCMRTLVGHSTGKISSLSFSATGDQL 1259

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            A A + D     + + D  I      + + +  + +  FS++G R + S+  +  M I+ 
Sbjct: 1260 ASAGFAD-----IEIWDMAIVNNTTPVQSRQERVKSVTFSASGHRLV-SLSWEGTMWIW- 1312

Query: 287  VDLQSNA----TERLTNTLFINISASYSPDSSQIV---FESDREGKEQLYVMQSNGSDQK 339
             D  +       ER  +   +  S ++S    ++    F  D      + +  +      
Sbjct: 1313 -DTVTGKCICTLERPVDGPSV-ASVAFSMAGDRVASGLFNGD------IKIWDTVTGRCM 1364

Query: 340  RISQDKEASYFDP---VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +  + +  ++       +S  G+ +A     G+   I +      +    ++   +    
Sbjct: 1365 QTFKHQGYNFSWVQSVAFSATGEQLASCSMGGD---IKIWNTGTGKCMQTLDHFQVTLVA 1421

Query: 397  WSPSGRSLI 405
            +SP+G  L 
Sbjct: 1422 FSPTGERLA 1430



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 58/189 (30%), Gaps = 13/189 (6%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FS    ++A           V + DT      + +     M+ +  FS +G     S  
Sbjct: 999  AFSEAGDRLA----SGLKNGLVKIWDTATGGLMQILQGHDDMVNSVAFSRDGNLLA-SGS 1053

Query: 278  KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D  + I+  D  +    + L        S S+S  S Q+   S     E + +      
Sbjct: 1054 RDHTIKIW--DTVTGDCVQILGGHNGPISSVSFSATSEQLASGSS---DETIKIWDVVAG 1108

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               +  +   A +     +    L A     G    I     D    +L    + +++  
Sbjct: 1109 KCVQTVEVNYAVHSVAFSNADARLAA--GLDGGSAIIWDTATDTQMHKLGNYRAFVESVA 1166

Query: 397  WSPSGRSLI 405
            +S     L 
Sbjct: 1167 FSADDERLA 1175



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 93/304 (30%), Gaps = 63/304 (20%)

Query: 161  DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            D+Y+  T E   F+       + + SG+    + + D     +  +    D ++    FS
Sbjct: 989  DLYE-TTPESVAFSE----AGDRLASGLKNGLVKIWDTATGGLMQILQGHDDMVNSVAFS 1043

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
             +   +A  + D      + + DT      + +G     I +  FS+  ++   S   DE
Sbjct: 1044 RDGNLLASGSRDH----TIKIWDTVTGDCVQILGGHNGPISSVSFSATSEQLA-SGSSDE 1098

Query: 281  AMDIYSV-----------------------------DLQSNAT-----------ERLTNT 300
             + I+ V                              L   +             +L N 
Sbjct: 1099 TIKIWDVVAGKCVQTVEVNYAVHSVAFSNADARLAAGLDGGSAIIWDTATDTQMHKLGNY 1158

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S ++S D  ++      E    + +  +            E + F   +    D 
Sbjct: 1159 RAFVESVAFSADDERLA---SGESHGTIKIWDTATGACLHTLHGHEDAVFYVGFLRGTDR 1215

Query: 361  IAFTKFSGEKFAIGVMKKD-GSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            +A   F G    + +     G   R LV      + + ++S +G  L       G    +
Sbjct: 1216 LASGSFDGT---VKIWDPAIGKCMRTLVGHSTGKISSLSFSATGDQLA----SAGFADIE 1268

Query: 418  LYSI 421
            ++ +
Sbjct: 1269 IWDM 1272


>gi|289627178|ref|ZP_06460132.1| hypothetical protein PsyrpaN_18919 [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289648688|ref|ZP_06480031.1| hypothetical protein Psyrpa2_13190 [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|320324053|gb|EFW80136.1| hypothetical protein PsgB076_14417 [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329002|gb|EFW85001.1| hypothetical protein PsgRace4_17034 [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330868015|gb|EGH02724.1| hypothetical protein PSYAE_12348 [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 377

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 69/179 (38%), Gaps = 23/179 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FSS+GK   +  +    +  ++++ ++ A ++ +    I    + +P  ++    +D +
Sbjct: 206 AFSSDGKFLYVVGEMSGTVTAFAINQKTGALKQTSTADGIPKRLNLAPGQARDARNNDLK 265

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                 +  ++                    +P G  +  ++ +    ++  ++    + 
Sbjct: 266 DDPTPRIWAAD-----------------IRLAPNGKWLFISERTSSSVSVFKVEPASGKV 308

Query: 384 RLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             +    V++   +    SP+GR L+ S +K    GS  Y+I  NG  + +   P+   
Sbjct: 309 TFVENYPVQEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIAANGALQRVSEAPSGKG 365



 Score = 37.3 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 74/235 (31%), Gaps = 21/235 (8%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDI 284
            AY +   + ++  Y +D +               + P   SS+GK    +++      +
Sbjct: 24  FAYISSPTDGLISQYRLDEQSGALSLVEQTKAGDQVNPMAISSDGKALFAALRSKPYQVL 83

Query: 285 -YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRI 341
            +S++  +   + L+        A  S D S         G + L V  + +       I
Sbjct: 84  SFSIEPATGHLKPLSQAPLAESLAYLSTDRSGRFLFGASYGADLLSVQPIDAQHRPSDSI 143

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGS------QERLLVEDSNLQ 393
              K   +   V +   +   +    G        +  KDG           + E++  +
Sbjct: 144 QTYKTGMHAHSVRTDPSNRFVYAGNLGVDRVLQYRLEPKDGKLVPIGEGYVAVTENTGPR 203

Query: 394 APTWSPSGRSLIFSRKKDG---------DTGSKLYSIDLNGRNETLINTPAYASD 439
              +S  G+ L    +  G          TG+   +   +G  + L   P  A D
Sbjct: 204 HLAFSSDGKFLYVVGEMSGTVTAFAINQKTGALKQTSTADGIPKRLNLAPGQARD 258


>gi|221128623|ref|XP_002166106.1| PREDICTED: similar to predicted protein, partial [Hydra
           magnipapillata]
          Length = 227

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 61/191 (31%), Gaps = 10/191 (5%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             S  + + + + D D               +   FSP+ + +A  ++  +    V L+ 
Sbjct: 1   GASSSLDSHIRIWDLDKGKQIKSIDLGPVDSWTVTFSPDSRYIATGSHTGK----VNLIG 56

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  + +       ++  +S +GK        D  ++I+ +  +      L      
Sbjct: 57  VESGIKEETLDTRSKFTMSIAYSPDGKYLA-CGAIDGIINIFDMTSK-KLLHTLEGHAMP 114

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S ++SPDS  ++  SD      L +     ++         +      +SP       
Sbjct: 115 IRSLTFSPDSQILLTASD---DGHLKMYDVQHANLAGTLSGHGSWVVSVDYSPDNKHFV- 170

Query: 364 TKFSGEKFAIG 374
           +  S +   I 
Sbjct: 171 SASSDKSVKIW 181



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 1/80 (1%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +   +   Q +         +   +SP    IA    +G+   IGV +    +E L
Sbjct: 8   SHIRIWDLDKGKQIKSIDLGPVDSWTVTFSPDSRYIATGSHTGKVNLIGV-ESGIKEETL 66

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
                   +  +SP G+ L 
Sbjct: 67  DTRSKFTMSIAYSPDGKYLA 86


>gi|289615338|emb|CBI57924.1| putative transcriptional repressor TUP1 [Sordaria macrospora]
          Length = 602

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 68/197 (34%), Gaps = 22/197 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----FRSMILAPRFSSNGKRAL 273
           RFS + +   Y         ++Y ++T       +  N        I +  FS +GK   
Sbjct: 302 RFSMDGK---YVATGCNRSAQIYDVETGEKLCILQDENIDLTGDLYIRSVCFSPDGKYLA 358

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +  +D+ + ++  D+QS       +    +  S  +S D   I   S   G   + +  
Sbjct: 359 -TGAEDKLIRVW--DIQSRTIRNTFHGHEQDIYSLDFSRDGRTIASGS---GDRTVRLWD 412

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSN 391
                   +   ++        SP    +A          + V    G   ERL   D +
Sbjct: 413 IETGQNTSVLSIEDG-VTTVAISPDKQFVAAGSLDKS---VRVWDMRGYLAERLEGPDGH 468

Query: 392 ---LQAPTWSPSGRSLI 405
              + +  +SP GR+L+
Sbjct: 469 KDSVYSVAFSPDGRNLV 485



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 81/242 (33%), Gaps = 45/242 (18%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            R+WD++ R             + R   H    DIY       G           ++ SG
Sbjct: 366 IRVWDIQSR-------------TIRNTFHGHEQDIYSLDFSRDG----------RTIASG 402

Query: 188 IIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
               ++ + D   G N   L  S +  +     SP++Q VA  + D    +RV+ M   +
Sbjct: 403 SGDRTVRLWDIETGQNTSVL--SIEDGVTTVAISPDKQFVAAGSLD--KSVRVWDMRGYL 458

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-----------QSNATE 295
               +     +  + +  FS +G+  + S   D+ + ++ +                  +
Sbjct: 459 AERLEGPDGHKDSVYSVAFSPDGRNLV-SGSLDKTIKMWELSAPRGIPTSAPPKGGRCIK 517

Query: 296 RLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                    +S + +PDS  ++  S DR     +          + + Q  + S      
Sbjct: 518 TFEGHRDFVLSVALTPDSQWVLSGSKDRG----VQFWDPRTGHTQLMLQGHKNSVISVAP 573

Query: 355 SP 356
           SP
Sbjct: 574 SP 575


>gi|239927835|ref|ZP_04684788.1| acyl-peptide hydrolase [Streptomyces ghanaensis ATCC 14672]
          Length = 650

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 91/288 (31%), Gaps = 50/288 (17%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN------IRYLTPSRDQILFEPRF 219
           +  E+G+    +   +    S + +  L  +  DG+       +R L+  R + +  PR 
Sbjct: 131 LLPERGEVWCVLEEFTGEGPSDVRR-VLAAVPLDGSAAEDRGAVRELSDDRHRFVTGPRL 189

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P+ ++ A+  +D   +                               +G   L++    
Sbjct: 190 APDGRRAAWLAWDHPRMPW-----------------------------DGTELLLADVTP 220

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +        +     E +           ++ D  ++++ SDR G   LY         +
Sbjct: 221 DGTLRDVRTVAGGPEESVAQVD-------WTHDG-RLLYASDRTGWWNLYR-DGEALCPR 271

Query: 340 RISQDKEASYFDPVW-SP-QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                         W +P    LIA     G   A+GV+  +  +            PT 
Sbjct: 272 EEEFGGPLWKLGSRWFAPLDSGLIAVVHGRGAA-ALGVLDPETGEVVDAAGPWTEFTPTL 330

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
           +  G  ++ +      +  ++  +D   GR   + +    A DP +  
Sbjct: 331 AAHGERVV-AVGAGPRSAHEVVELDTRTGRARVIGSAHQDAVDPAYYP 377


>gi|241950573|ref|XP_002418009.1| histone transcription regulator, putative [Candida dubliniensis
           CD36]
 gi|223641348|emb|CAX43308.1| histone transcription regulator, putative [Candida dubliniensis
           CD36]
          Length = 913

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 76/222 (34%), Gaps = 31/222 (13%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDD------------EDILRVYLMDTRIDRAPKRIG 254
               + ++   +FSP+ + +A  + D                      D       KR+ 
Sbjct: 87  MSRHNGVVTSLKFSPDGRWLASGSDDKICLIWEKDNTQIAKSFGTDEHDLEHWTVRKRLV 146

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              + I    +S +G   L++V  D ++ I++  L     +R      +     + P + 
Sbjct: 147 AHDNDIQDICWSPDGN-LLVTVGLDRSVIIWNA-LTFEKIKRYDIHQSMVKGIVFDPANK 204

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-------------VWSPQGDLI 361
                SD +   +++      ++        E    DP              WSP G  I
Sbjct: 205 FFATASD-DRTVRIFRYYKKLNEYNNYEFQMEHVVVDPFRKSPLTSYFRRMSWSPDGQHI 263

Query: 362 AFTKFSGEKF-AIGVMKKD--GSQERLLVEDSNLQAPTWSPS 400
           A    +     ++ ++ +   GS   L+  ++ ++  ++SPS
Sbjct: 264 AVPNATNGPVPSVAIINRGNWGSDISLIGHEAPVEVCSFSPS 305



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 78/249 (31%), Gaps = 51/249 (20%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D +   +R    + D  + +  +SP+   +     D      V + +       KR    
Sbjct: 135 DLEHWTVRKRLVAHDNDIQDICWSPDGNLLVTVGLDR----SVIIWNALTFEKIKRYDIH 190

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIY-------------------SVDLQSNATERL 297
           +SM+    F    K    +   D  + I+                    VD    +   L
Sbjct: 191 QSMVKGIVFDPANKFFA-TASDDRTVRIFRYYKKLNEYNNYEFQMEHVVVDPFRKSP--L 247

Query: 298 TNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQSN--GSDQKRISQDKEASYFDPVW 354
           T+        S+SPD   I   +   G    + ++     GSD   I    EA      +
Sbjct: 248 TSYF---RRMSWSPDGQHIAVPNATNGPVPSVAIINRGNWGSDISLI--GHEAPVEVCSF 302

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-P---------------TWS 398
           SP    I  T  + E+     +   G Q+R L   S   + P                WS
Sbjct: 303 SPSLFQIGDT-PANEEIKFQTVVATGGQDRTLAVWSTCNSRPIVVCSDIVDNSITDICWS 361

Query: 399 PSGRSLIFS 407
           P G +L FS
Sbjct: 362 PDGETLYFS 370



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 67/213 (31%), Gaps = 33/213 (15%)

Query: 232 DDEDILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             +D     L +   D++ +R          ++ + +FS +G+    S   D+   I+  
Sbjct: 62  SKKDSASTKLEELLPDKSLRRPLCSMSRHNGVVTSLKFSPDGRWLA-SGSDDKICLIWEK 120

Query: 288 D----LQS-----------NATERLTNTLFINISASYSPDSSQIVFES-DRE-------G 324
           D     +S              +RL           +SPD + +V    DR         
Sbjct: 121 DNTQIAKSFGTDEHDLEHWTVRKRLVAHDNDIQDICWSPDGNLLVTVGLDRSVIIWNALT 180

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF----SGEKFAIGVMKKDG 380
            E++     + S  K I  D  A+ F    S    +  F  +        +   +     
Sbjct: 181 FEKIKRYDIHQSMVKGIVFD-PANKFFATASDDRTVRIFRYYKKLNEYNNYEFQMEHVVV 239

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
              R     S  +  +WSP G+ +      +G 
Sbjct: 240 DPFRKSPLTSYFRRMSWSPDGQHIAVPNATNGP 272


>gi|329940338|ref|ZP_08289619.1| acyl-peptide hydrolase [Streptomyces griseoaurantiacus M045]
 gi|329300399|gb|EGG44296.1| acyl-peptide hydrolase [Streptomyces griseoaurantiacus M045]
          Length = 661

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/248 (14%), Positives = 82/248 (33%), Gaps = 49/248 (19%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D A +R LT +  + +  PR SP+ ++ A+  +D   +                      
Sbjct: 173 DRAAVRELTAAAHRFVTGPRLSPDGRRAAWLAWDHPRMPW-------------------- 212

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                    +G   L++   ++ +      +     E +         A +  D + +++
Sbjct: 213 ---------DGTELLLADVGEDGLLHGVRTVAGGPEESIPQ-------ADWDADGT-LLY 255

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL--------IAFTKFSGEK 370
            SDR G    Y +   G   +  ++++E  +  P+W+             +A     G  
Sbjct: 256 LSDRSGWWNPYRLDEAGRHHRLCAREEE--FGGPLWTVGQRWFAPLTEGLLAVVHGRGTT 313

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             +G++  +  +        +  APT +  G  ++        +   +  +D       +
Sbjct: 314 -TLGILDPETGEVVDAAGSWSEFAPTLAVHGSRIV-GVGAGPRSAPAVVELDARTGRIRV 371

Query: 431 INTPAYAS 438
           I  PA   
Sbjct: 372 IGAPAEDP 379



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 76/273 (27%), Gaps = 35/273 (12%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG          +    EPR +   ++       D  +  V            R+  +  
Sbjct: 23  DGTPDHVGFVGDEPWWTEPRPTEGGRRTLVRRTADGTVRSVL---PAPWNVRSRVHEYGG 79

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS----PDSS 314
              A    S G   + S   D+ +  ++ D+       LT    +     +         
Sbjct: 80  RPWAGTTGSEGPLVVFSEGADQRLYAHAPDVPGAVPRPLTPLSPVGGGLRWVDPVIHAGR 139

Query: 315 QIVFES----DREGKEQLYV----MQSNGSDQ------KRISQDKEASYFDPVWSPQGDL 360
             V+        EG   +      +  +GS        + ++         P  SP G  
Sbjct: 140 GEVWCVLEEFTGEGPWDVRRVPVAVPLDGSAAEDRAAVRELTAAAHRFVTGPRLSPDGRR 199

Query: 361 IAFTK-------FSGEKFAIGVMKKDG--SQERLLVEDSNLQAPT--WSPSGRSLIFSRK 409
            A+         + G +  +  + +DG     R +        P   W   G  L++   
Sbjct: 200 AAWLAWDHPRMPWDGTELLLADVGEDGLLHGVRTVAGGPEESIPQADWDADGT-LLYLSD 258

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           + G      Y +D  GR+  L         P W
Sbjct: 259 RSGWWNP--YRLDEAGRHHRLCAREEEFGGPLW 289


>gi|326932289|ref|XP_003212252.1| PREDICTED: WD repeat-containing protein 8-like [Meleagris
           gallopavo]
          Length = 452

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 92/249 (36%), Gaps = 16/249 (6%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T       +     +  +V+  ++  L + D +   I  L    DQI +   +S +   +
Sbjct: 8   TSWVEPGVTGRWSPAGRLVASCVQYRLIIRDVNTLQILQLYTCLDQIQYI-EWSSDSLFI 66

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                    I++V+ ++        +I    + ++A  +S +G+  L + +    + ++S
Sbjct: 67  L-CAMYKRGIVQVWSLEQPDWHC--KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS 123

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
             L + +   +          +++ D   +     R+ K+ + +   +     R    + 
Sbjct: 124 --LCTKSVSYIKYPKACQQGIAFTKDGRYMAVAERRDCKDFVSLFVCSNWQLLRHFDTET 181

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE------DSNLQAPTWSPS 400
              F   W+P G ++A    +  ++ I +   DG   RLL           +++  WSPS
Sbjct: 182 QDLFGIEWAPNGCVLA-VWDTCLEYKILLYSLDG---RLLSTYQAYEWSLGIKSIAWSPS 237

Query: 401 GRSLIFSRK 409
            + L     
Sbjct: 238 SQFLAIGSY 246


>gi|315443859|ref|YP_004076738.1| VCBS repeat-containing protein,YVTN family beta-propeller repeat
           protein [Mycobacterium sp. Spyr1]
 gi|315262162|gb|ADT98903.1| VCBS repeat-containing protein,YVTN family beta-propeller repeat
           protein [Mycobacterium sp. Spyr1]
          Length = 1071

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 70/205 (34%), Gaps = 16/205 (7%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-ISVQKDE 280
           N  +V     DD  + ++    T  +    ++      +     S +G     +S    +
Sbjct: 341 NGSRVYVVNSDDGTVSKI---STLTNTVVGKVYGVAEGVSEITISPDGSTIYTLSSTTGQ 397

Query: 281 AMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                S  L++  T  +T  +  I    ++S D SQ VF +D  G   + V+ +    Q 
Sbjct: 398 VSRFSSTALRAQQTVAVTPASQGI----TFSADGSQ-VFVADIAGS--IRVLDAATGQQV 450

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---T 396
                     FD   SP G  +   +    K +   +        ++     +  P   +
Sbjct: 451 DSIAVTAGLPFDIAASPDGTTLYVARSEDGKLSAYDIATKTELTSVIANPYEVDGPPLIS 510

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
            SP G  L ++ +  G   + +  +
Sbjct: 511 VSPDGTQLYWA-EFGGTRVNVIALV 534



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 61/171 (35%), Gaps = 15/171 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +   +     + R      R  +        + +     FS++G +  ++  
Sbjct: 380 TISPDGSTIYTLSSTTGQVSRFSSTALRAQQTVAVTPASQGI----TFSADGSQVFVA-- 433

Query: 278 KDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D A  I  +D  +        +T  L  +I+A  SPD + +      +GK   Y + + 
Sbjct: 434 -DIAGSIRVLDAATGQQVDSIAVTAGLPFDIAA--SPDGTTLYVARSEDGKLSAYDI-AT 489

Query: 335 GSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            ++   +  +       P    SP G  + + +F G +  +  +  D +  
Sbjct: 490 KTELTSVIANPYEVDGPPLISVSPDGTQLYWAEFGGTRVNVIALVPDNADP 540


>gi|312070070|ref|XP_003137976.1| uncoordinated protein 78 [Loa loa]
 gi|307766861|gb|EFO26095.1| uncoordinated protein 78 [Loa loa]
          Length = 614

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 52/263 (19%), Positives = 90/263 (34%), Gaps = 52/263 (19%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRF----------SPNQQ--------KVAYATYDDED 235
              D +G   R+   S D     P            SPN           +A+ ++    
Sbjct: 343 FTADFEGNITRWCLNSGDSERLLPAVHSSQVSDMSVSPNGDLVSVGWDDSIAFTSF-PGS 401

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +  V     ++   P+++               GK A+++ QK       +V        
Sbjct: 402 LDHVQSNKVKLSSQPRQLALGSG----------GKIAVVACQKS-----VTVFSDGKQ-- 444

Query: 296 RLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFD 351
             T +  I+  AS    +PDS      S  EGK  +Y + SN   + K ISQ    S   
Sbjct: 445 --TISENIDYEASCVAVAPDSRLTAVGSQ-EGKVHVYELNSNQMKEIKTISQTG--SITS 499

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             WSP G+ +     +  K     +  D    +++      + +    WSP  R   F  
Sbjct: 500 LSWSPNGNFLV-ATDTNRKVIPYSVDNDYKCVTEKEWTFHSARVNCSAWSPDSR---FVA 555

Query: 409 KKDGDTGSKLYSIDLNGRNETLI 431
               DT   ++ ++ +G +  +I
Sbjct: 556 TGGIDTNVIVWDLNHSGEHPIII 578



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 53/162 (32%), Gaps = 10/162 (6%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-T 298
           Y+ D      P+ +   R M L+   S +G++ +          +Y   +Q+     + T
Sbjct: 7   YVQDATFASLPRTV---RGMPLSLHASPDGQKLIYC----NGNSVYIRSIQNPKECEIYT 59

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   A YSP    I    D+ GK +++         K           D  WS   
Sbjct: 60  EHANPTTVAKYSPSGFYIA-SGDQSGKIRIWDATQPTHILKAEYPILSGPVRDIAWSDDS 118

Query: 359 DLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQAPTWSP 399
             IA      E+F  + +     S   L  +   + +  + P
Sbjct: 119 KRIAVVGEGRERFGHVFLFDTGTSNGNLSGQSRTMSSIDFRP 160



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 58/435 (13%), Positives = 121/435 (27%), Gaps = 110/435 (25%)

Query: 115 RVIKEGKDRLRV-EFRLWDVK-DRKQIIGKKFFSSPASWR-----KIAHTISDDIYQSIT 167
           R+   G+ R R     L+D       + G+    S   +R     ++     D+      
Sbjct: 120 RIAVVGEGRERFGHVFLFDTGTSNGNLSGQSRTMSSIDFRPARPYRLVSGSEDNTVALFE 179

Query: 168 GEKGDF------NSRILFVSESVVSG----IIKNSLCVMDRDGANIRYLTP--------- 208
           G    F      ++R ++     VSG           V+  DG + +             
Sbjct: 180 GPPFKFLTLFHEHTRFVYCVRYNVSGTLFASSGADGKVILYDGTSGQKEGEFVDDQCKGM 239

Query: 209 SRDQILFEPRFSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           +    +F   +SP+ Q +A A+       +D              +   +++    +   
Sbjct: 240 AHAGSVFALCWSPDGQHIATASGDKTIKIWDIASRKLEKTFVIGKNVDDQQLSIVWTKAF 299

Query: 262 APRFSSNG-------------------------------KRALISVQKDEAMDIYSVDLQ 290
               S +G                               K    +   +  +  + ++  
Sbjct: 300 LAGVSLSGFINILDLESCSVSKVLKGHNKPITALTVCPEKALAFTADFEGNITRWCLN-- 357

Query: 291 SNATERL--TNTLFINISASYSPDSS--------QIVFESDREGKEQLYVMQSNGSDQKR 340
           S  +ERL            S SP+           I F S     + +   +   S Q R
Sbjct: 358 SGDSERLLPAVHSSQVSDMSVSPNGDLVSVGWDDSIAFTSFPGSLDHVQSNKVKLSSQPR 417

Query: 341 ----------------------------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                                       IS++ +        +P   L A     G+   
Sbjct: 418 QLALGSGGKIAVVACQKSVTVFSDGKQTISENIDYEASCVAVAPDSRLTAVGSQEGKVHV 477

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR---NET 429
             +      + + + +  ++ + +WSP+G  L+ +   +       YS+D + +    + 
Sbjct: 478 YELNSNQMKEIKTISQTGSITSLSWSPNGNFLV-ATDTNRKVIP--YSVDNDYKCVTEKE 534

Query: 430 LINTPAYASDPQWVG 444
                A  +   W  
Sbjct: 535 WTFHSARVNCSAWSP 549



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 78/230 (33%), Gaps = 29/230 (12%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +           ++SP+   +A  + D    +R++                   +    +
Sbjct: 57  IYTEHANPTTVAKYSPSGFYIA--SGDQSGKIRIWDATQPTHILKAEYPILSGPVRDIAW 114

Query: 266 SSNGKRALISVQ-KDEAMDIYSVDLQSNA---TERLTNTLFINISA-------SYSPDSS 314
           S + KR  +  + ++    ++  D  ++    + +      I+          S S D++
Sbjct: 115 SDDSKRIAVVGEGRERFGHVFLFDTGTSNGNLSGQSRTMSSIDFRPARPYRLVSGSEDNT 174

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKF 371
             +F    EG    +   +   +  R       +    +++     G +I +   SG+K 
Sbjct: 175 VALF----EGPP--FKFLTLFHEHTRFVYCVRYNVSGTLFASSGADGKVILYDGTSGQKE 228

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              V      Q + +    ++ A  WSP G+ +  +    GD   K++ I
Sbjct: 229 GEFVDD----QCKGMAHAGSVFALCWSPDGQHIATAS---GDKTIKIWDI 271



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 53/335 (15%), Positives = 102/335 (30%), Gaps = 51/335 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA------------------ 155
           G  I  G    ++  R+WD      I+  ++       R IA                  
Sbjct: 74  GFYIASGDQSGKI--RIWDATQPTHILKAEYPILSGPVRDIAWSDDSKRIAVVGEGRERF 131

Query: 156 -HTISDDIYQSITGEKGDFNSRILF-----VSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            H    D   S     G   +             +VSG   N++ + +  G   ++LT  
Sbjct: 132 GHVFLFDTGTSNGNLSGQSRTMSSIDFRPARPYRLVSGSEDNTVALFE--GPPFKFLTLF 189

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN------FRSMILAP 263
            +   F      N     +A+    D   +    T   +  + + +          + A 
Sbjct: 190 HEHTRFVYCVRYNVSGTLFASSGA-DGKVILYDGTSGQKEGEFVDDQCKGMAHAGSVFAL 248

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +S +G+    +   D+ + I+  D+ S   E+ T  +  N+            F +   
Sbjct: 249 CWSPDGQHIA-TASGDKTIKIW--DIASRKLEK-TFVIGKNVDDQQLSIVWTKAFLAGVS 304

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + ++        ++ +            P+   +AFT           +   G  E
Sbjct: 305 LSGFINILDLESCSVSKVLKGHNKPITALTVCPE-KALAFTADFEGNITRWCLN-SGDSE 362

Query: 384 RLL--VEDSNLQAPTWSPSG--------RSLIFSR 408
           RLL  V  S +   + SP+G         S+ F+ 
Sbjct: 363 RLLPAVHSSQVSDMSVSPNGDLVSVGWDDSIAFTS 397


>gi|301767212|ref|XP_002919021.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein
           51A-like, partial [Ailuropoda melanoleuca]
          Length = 426

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 84/233 (36%), Gaps = 18/233 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 50  TKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRD--KTVRIW 107

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+   ++   D+ + ++S   Q      L+  
Sbjct: 108 IPNVKGESTVFR--AHTATVRSVHFCSDGQS-FVTASDDKTVKVWSTHRQ-KFLFSLSQH 163

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +      +      +         + P G  
Sbjct: 164 INWVRCARFSPDGRLIVSASD---DKTVKLWDKTSRECVHSYCEHGGFVTSVDFHPSGTC 220

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
           IA            V        RLL    +  + + A ++ PSG  L+ +  
Sbjct: 221 IAAAGMDNTVKVWDV-----RTHRLLQHYQLHSAAVNALSFHPSGNYLLTASS 268



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 76/261 (29%), Gaps = 33/261 (12%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           ++R   H   D +        G            + SG    ++ +   +      +  +
Sbjct: 73  AYRFAGHK--DAVTCVNFSPSG----------HLLASGSRDKTVRIWIPNVKGESTVFRA 120

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    F  + Q    A+ D      V +  T   +    +    + +   RFS +G
Sbjct: 121 HTATVRSVHFCSDGQSFVTASDDK----TVKVWSTHRQKFLFSLSQHINWVRCARFSPDG 176

Query: 270 KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R ++S   D+ + ++  D  S               S  + P  + I           +
Sbjct: 177 -RLIVSASDDKTVKLW--DKTSRECVHSYCEHGGFVTSVDFHPSGTCIAAAGM---DNTV 230

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V         +  Q   A+     + P G+ +           + +M     + RLL  
Sbjct: 231 KVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLM-----EGRLLYT 285

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
               Q P       ++ FSR 
Sbjct: 286 LHGHQGPA-----TTVAFSRT 301


>gi|288801512|ref|ZP_06406964.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039]
 gi|288331593|gb|EFC70079.1| OmpA family protein [Prevotella sp. oral taxon 299 str. F0039]
          Length = 674

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 54/153 (35%), Gaps = 24/153 (15%)

Query: 299 NTLFINISASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQK-------RISQDKEAS 348
           NT +   +  +SPD   +      SD        +M SN SD         +I+ D  ++
Sbjct: 211 NTAYDEGACCFSPDLRTMYLTQCASDPSYPRYAQIMTSNRSDASWAKANQLKITNDTLST 270

Query: 349 YFDPVWSPQGDLIAFTKF---SGEKFAIGVMKKDGSQER-------LLVEDSNLQAPTWS 398
           +  P  SP G+ + F            I   +   S           +  + +   P + 
Sbjct: 271 FAHPAISPDGNWLYFVSDMPGGKGGLDIWRAQLTTSGIASIENLGDPINTEGDEMFPCFR 330

Query: 399 PSGRSLIFSRKKD---GDTGSKLYSIDLNGRNE 428
           P+G  L FS       G     + +I+ NG+ E
Sbjct: 331 PNGD-LYFSSNGHVGLGGLDIFIAAINQNGQYE 362



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 45/148 (30%), Gaps = 20/148 (13%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKR--I 253
           AN   +T         P  SP+   + + +         DI R  L  + I         
Sbjct: 258 ANQLKITNDTLSTFAHPAISPDGNWLYFVSDMPGGKGGLDIWRAQLTTSGIASIENLGDP 317

Query: 254 GNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERL------TNTLFIN 304
            N     + P F  NG     S         +DI+   +  N    L       NT    
Sbjct: 318 INTEGDEMFPCFRPNGD-LYFSSNGHVGLGGLDIFIAAINQNGQYELQHPNYPLNTSADE 376

Query: 305 ISASYSPDSSQIVFESDRE---GKEQLY 329
              ++    ++  F S+R    G + +Y
Sbjct: 377 FGITFETVHNRGFFSSNRNDARGYDHIY 404


>gi|283777973|ref|YP_003368728.1| hypothetical protein Psta_0172 [Pirellula staleyi DSM 6068]
 gi|283436426|gb|ADB14868.1| hypothetical protein Psta_0172 [Pirellula staleyi DSM 6068]
          Length = 1276

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 54/153 (35%), Gaps = 17/153 (11%)

Query: 208 PSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             R ++   P     SP  +   +A     + + V  + +       ++    S      
Sbjct: 475 NFRSEMRIMPESLTISPGGR---FAAVLMGEAIGVIDLTSGKPAGALQLSKKPSRSDGMS 531

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNAT-------ERLTNTLFINISASYSPDSSQIV 317
           FS +G +    +    +  +Y  D QS  T       ERL++  +      + PD S +V
Sbjct: 532 FSPDGTKLAAMISTTGSHQLYVFDFQSGKTLLDHDYGERLSSFSYKGPELDWVPDGSGLV 591

Query: 318 FES----DREGKEQLYVMQSNGSDQKRISQDKE 346
           ++     +     +++      +  +R+ +  E
Sbjct: 592 YQGHLLLEPTTGGEVWEFPHTDNSPRRMVRPGE 624



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 74/209 (35%), Gaps = 28/209 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQK 278
           SP+ + +A       + +RV +         +      + +  P RF ++    ++   K
Sbjct: 390 SPDGRYMALVQEQRSESIRVGVYSFATGAIAREFKLEGADVTGPLRFGASHHLVILYRTK 449

Query: 279 DEAMDIYS-VDLQSNATERLTNTLFINI----------SASYSPDSSQIVFESDREGKEQ 327
           D    + +  ++Q+   E+++   F +           S + SP      F +   G+  
Sbjct: 450 DREQQVLAHYNIQTG--EKVSEVKFDDNFRSEMRIMPESLTISPGGR---FAAVLMGEAI 504

Query: 328 LYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             +  ++G     +   K+ S  D   +SP G  +A    +     + V      +  LL
Sbjct: 505 GVIDLTSGKPAGALQLSKKPSRSDGMSFSPDGTKLAAMISTTGSHQLYVFDFQSGK-TLL 563

Query: 387 VEDSNLQAPTWS---------PSGRSLIF 406
             D   +  ++S         P G  L++
Sbjct: 564 DHDYGERLSSFSYKGPELDWVPDGSGLVY 592


>gi|255007916|ref|ZP_05280042.1| hypothetical protein Bfra3_02178 [Bacteroides fragilis 3_1_12]
 gi|313145624|ref|ZP_07807817.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313134391|gb|EFR51751.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 384

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 90/275 (32%), Gaps = 49/275 (17%)

Query: 201 ANIRYLTPSRDQILFEPR--FSPNQQKV-AYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           AN  YL PS D         FS +Q  V A+A    +  LR+      +   P  +    
Sbjct: 73  ANPSYLVPSDDGKFVYSVNEFSKDQASVSAFAFDKTKGTLRLLNTQKTMGADPCYLITNG 132

Query: 258 SMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISA-----SYS 310
             ++   +S  G   +  + KD +       ++ + +                      +
Sbjct: 133 KNVITANYS-GGSITVFPIGKDGSLLPASDVIEFKGSGP-----DKERQTMPHLHCVRIT 186

Query: 311 PDSSQIVFESDREGKEQLYVMQSN-----GSDQKRISQDKEASY--------FDPVWSPQ 357
           PD   ++  +D  G +Q++    N      + +K +++    ++           ++SP 
Sbjct: 187 PDGKYLL--ADDLGTDQIHKFNLNPNANADNKEKLLTKGNPEAFKVAPGSGPRHLIFSPD 244

Query: 358 -----------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                      G +IAF    G    I  +  D    +      ++     SP G+ L +
Sbjct: 245 SKFAYLINEIGGTVIAFRYTDGMLDEIQTIAADTVNAQ---GSGDIH---ISPDGKYL-Y 297

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +  +    G  ++ +D      T +        P+
Sbjct: 298 ASNRLKADGIAIFKVDKTNGTLTKVGYQLTGIHPR 332


>gi|186471028|ref|YP_001862346.1| YVTN beta-propeller repeat-containing protein [Burkholderia
           phymatum STM815]
 gi|184197337|gb|ACC75300.1| 40-residue YVTN family beta-propeller repeat protein [Burkholderia
           phymatum STM815]
          Length = 492

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 69/195 (35%), Gaps = 22/195 (11%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----------RFSSNGKRALIS 275
            YA     + + V            R+G+      +P            +S + +   + 
Sbjct: 44  VYAAEQFSNTVSVIDPAANKLVGLIRLGDPSPSNFSPLYKGQLLVHGMGYSPDHRTIAVV 103

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                +  +  +D Q+NAT+ +T        A ++PD  + V+ + R      YV   +G
Sbjct: 104 SI--GSNSVSFIDTQTNATKHVTYVGRSPHEAFFTPDGKE-VWVTVRGEN---YVAVLDG 157

Query: 336 SDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           +  + I++    A     ++SP G           +    V+     +    V+ ++   
Sbjct: 158 TTFEEITRITVPAGPGMQIFSPDGKYGYVCSSFNPETE--VVSVADHKIVGAVKQASPFC 215

Query: 395 PTWS--PSGRSLIFS 407
           P  +  P G+ + F+
Sbjct: 216 PDIAATPDGKQVWFT 230



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 74/189 (39%), Gaps = 10/189 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+ ++V + T   E+ + V    T  +     +     M +   FS +GK   +    
Sbjct: 135 FTPDGKEV-WVTVRGENYVAVLDGTTFEEITRITVPAGPGMQI---FSPDGKYGYVCSSF 190

Query: 279 DEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +   ++ SV D +     +  +    +I+A+  PD  Q+ F     GK Q++  +   + 
Sbjct: 191 NPETEVVSVADHKIVGAVKQASPFCPDIAAT--PDGKQVWFTLKDVGKVQVFDARPPFAL 248

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            K +      ++ + V +  G + A+    G    + V + D   +   V   NL    W
Sbjct: 249 IKTLDTGPITNHVNIVHNANG-MFAYVTV-GGLNVVKVFRTDDFSQVATVPVGNLPHGLW 306

Query: 398 -SPSGRSLI 405
            S  G  + 
Sbjct: 307 PSGDGSRIY 315


>gi|283779576|ref|YP_003370331.1| serine/threonine protein kinase with WD40 repeats [Pirellula staleyi
            DSM 6068]
 gi|283438029|gb|ADB16471.1| serine/threonine protein kinase with WD40 repeats [Pirellula staleyi
            DSM 6068]
          Length = 1956

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 62/165 (37%), Gaps = 14/165 (8%)

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD----LQSNATERLTNTLFINISA 307
             +   R  + +  FSS+GK  +I+  +D    ++SVD    +     E         + A
Sbjct: 1597 VLEGHRGRVHSGVFSSDGKW-VITASEDRTARLWSVDSLATISGGILE----HPADVLFA 1651

Query: 308  SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---QDKEASYFDPVWSPQGDLIAFT 364
            ++SPD S+++     +   +++ +  +      ++       A+      S      A T
Sbjct: 1652 AFSPDDSRVI-TGCDDNIARVFKIDPSAMTAVELTDTLSGHTAAVTSVAISSDNRR-AVT 1709

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                    +  ++       L   ++ + +  +SP GR ++ S  
Sbjct: 1710 GSKDGIAKLWCLETSKEVLSLKRHEAEITSVHFSPDGRDILTSST 1754



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 54/154 (35%), Gaps = 8/154 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISV 276
             S +   +A A      I+R+Y        +P +     R+ +L+   S +G +   S 
Sbjct: 839 ALSRDGSLLAAAIDSPRGIVRIYRRQASGQFSPTQDFTIHRAGVLSVEISPDGTKLA-SS 897

Query: 277 QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +DE       +L +               S  +    +++V   D      + +    G
Sbjct: 898 SRDETAR--VTNLATGEMIAAFRGHFGPVWSVRFDSSGNELVTAGD---DATVRMWTLGG 952

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             + R+ +  + + ++  +S  G L+A      E
Sbjct: 953 PPKPRVFRGHKEAVYNATFSSDGKLVASAGRDKE 986



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 68/240 (28%), Gaps = 32/240 (13%)

Query: 186  SGIIKNSLCVMD----RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SG   N+  V D     D              +    FS ++Q     ++D     RV +
Sbjct: 1050 SGGHDNTARVWDLTAKPDDPTFVRTMRGHGGWVRSCLFSADEQFAISGSHDQ----RVKV 1105

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY---------------- 285
             +T      + +    + +L   FS+ G R  I+  +D    ++                
Sbjct: 1106 WNTPEYEEVRTLRQHDNAVLWAAFSTVGDRC-ITAGRDRRAILWNLGTGQPLATLNNDPL 1164

Query: 286  SVDLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +   +   +  T       F+  SA + P   + +  S   G   + +       Q   
Sbjct: 1165 EISGPTGEQKNATELKEGHEFLVTSALFMPAGDRRIITS--AGDNTVRLWDIATGGQLH- 1221

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
              D   +      S  G  +     + +     +        RL      +   T+S   
Sbjct: 1222 RFDGTGTISVIALSDDGKWLVTGSDTKDALLWSLADLSKPAVRLAAHRFEVSTATFSHDS 1281



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 62/166 (37%), Gaps = 11/166 (6%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            +       +    FS + + V  A+ D     R++ +D+    +   I    + +L   F
Sbjct: 1597 VLEGHRGRVHSGVFSSDGKWVITASED--RTARLWSVDSLATISGG-ILEHPADVLFAAF 1653

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN----TLFINISASYSPDSSQIVFESD 321
            S +  R +I+   D    ++ +D  +     LT+          S + S D+ + V    
Sbjct: 1654 SPDDSR-VITGCDDNIARVFKIDPSAMTAVELTDTLSGHTAAVTSVAISSDNRRAV-TGS 1711

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            ++G  +L+ +    S +    +  EA      +SP G  I  +   
Sbjct: 1712 KDGIAKLWCL--ETSKEVLSLKRHEAEITSVHFSPDGRDILTSSTD 1755



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 44/336 (13%), Positives = 99/336 (29%), Gaps = 52/336 (15%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI--------AHTIS---DDI 162
            GR++   +D   ++   WD+    ++        P   R +        A T+    DD 
Sbjct: 1334 GRLLTASQDHTVMQ---WDLATGNRLGNLTLR-HPDGVRNLLLTADSKRAITMCSSGDDS 1389

Query: 163  YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF------- 215
            Y+       D ++      +  + G     L ++    + +   T     +L+       
Sbjct: 1390 YRLY---SWDIDTAKAIECDINIPGSTATGLSLLPSQSSALLTTTTGDTSVLWTWDMASP 1446

Query: 216  --EPRFSPNQQK-VAYATYDDEDILRVYLMDTRIDR-------APKRIGNFRSMILAPRF 265
              +P +S    +   ++     D   +  +     R         ++  +    I A  F
Sbjct: 1447 QVQPLWSGKSLRGTIWSAISSHDGASILAVGGSQGRLLSAETGELEKTFSPHGAITAANF 1506

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNA-------TERL-----TNTLFINISASYSPDS 313
            SS+GK   ++   D    I+  D  S+          RL             + + S   
Sbjct: 1507 SSDGK-LAVTASSDGDAKIWCTDEASDKFGIVLLKMSRLHEVGGRAFAVNFAAFAPSSRG 1565

Query: 314  SQIVFESDREGKEQLYVM----QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
              ++     +   +L+ +         +   + +         V+S  G  +        
Sbjct: 1566 EAMLLTCGDDNNAKLWKINTSSDVPTYELAGVLEGHRGRVHSGVFSSDGKWVITASEDRT 1625

Query: 370  KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 V         +L   +++    +SP    +I
Sbjct: 1626 ARLWSVDSLATISGGILEHPADVLFAAFSPDDSRVI 1661


>gi|311899322|dbj|BAJ31730.1| hypothetical protein KSE_59600 [Kitasatospora setae KM-6054]
          Length = 919

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 75/205 (36%), Gaps = 37/205 (18%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +D   +R+      I++   S +G     SV  D    +  VD++S    ++  +  
Sbjct: 71  NQYVDPYGERLVIPNGKIMSSTVSPDGAHLAASV-ADGGAALVIVDVRSWKVRQVVGSGA 129

Query: 303 INI-----------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI------SQDK 345
            ++             +YSPD  Q+ +    +G  + + +  +GS    +      S  +
Sbjct: 130 ASVPQISGNSVGQEGPTYSPDGKQL-WLGQPDGYTR-FTVAPDGSVSGPVSVKIAKSGSQ 187

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +A     V+S  G   A+   +G+   + +    G+  R     +       +P G +L 
Sbjct: 188 QALVSGLVFSADGST-AYAAVNGQNRVVAIDTAAGTVTRSWTVGN-------APRGLAL- 238

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETL 430
                   +G KLY  +  GR    
Sbjct: 239 --------SGGKLYVSNEGGRPARP 255


>gi|167625518|ref|YP_001675812.1| peptidase S9 prolyl oligopeptidase [Shewanella halifaxensis
           HAW-EB4]
 gi|167355540|gb|ABZ78153.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella halifaxensis HAW-EB4]
          Length = 834

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 84/201 (41%), Gaps = 15/201 (7%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNATE---RLTNTLF 302
           R  + + ++     A +++ +G +  + ++  +  D +  +V+L   +     RL +  +
Sbjct: 371 RNLQLMQDWGWSQSAIQWTDSGDKVAVMLEAVDNKDRWIATVNLDKGSLTTQHRLHDDAW 430

Query: 303 INISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +N + +   + P+S  + + S+  G   +Y ++  G   K ++Q +     D    P+ +
Sbjct: 431 VNYNFNQYGWLPNSDSLYYLSEETGFSHIY-LKEQGEKAKALTQGQFV-VSDITLGPKAE 488

Query: 360 LIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF-SRKKDGDTGS 416
            I +   K       +  ++    ++  L E       T SP G +L+  +  +     +
Sbjct: 489 FIYYKANKTHPGIDNVYRVEIATGKDEQLTEWQGQLDYTLSPDGTALLLDASTR--IQPA 546

Query: 417 KLYSIDLNGRNETLINTPAYA 437
           +L+   + G  + L +  + A
Sbjct: 547 ELFVQPIGGELKQLTDYTSDA 567



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 52/139 (37%), Gaps = 8/139 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + PN   + Y + +      +YL         K +   + ++         +       K
Sbjct: 440 WLPNSDSLYYLSEETG-FSHIYLK--EQGEKAKALTQGQFVVSDITLGPKAEFIYYKANK 496

Query: 279 D--EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                 ++Y V++ +   E+LT     ++   + SPD + ++ ++    +     +Q  G
Sbjct: 497 THPGIDNVYRVEIATGKDEQLTEWQGQLDY--TLSPDGTALLLDASTRIQPAELFVQPIG 554

Query: 336 SDQKRISQDKEASYFDPVW 354
            + K+++     ++ +  W
Sbjct: 555 GELKQLTDYTSDAFKNYAW 573


>gi|67478579|ref|XP_654677.1| WD repeat protein [Entamoeba histolytica HM-1:IMSS]
 gi|56471751|gb|EAL49296.1| WD repeat protein [Entamoeba histolytica HM-1:IMSS]
          Length = 335

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 54/123 (43%), Gaps = 6/123 (4%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +A+ +Y +  I  V L      ++ + +     M+    FS + +  + +  +   
Sbjct: 144 DGKMIAFPSYQEGSIKLVNL----ETQSEREVQAHIHMVSTMAFSPDSRSLVTASAQGTL 199

Query: 282 MDIYSVD-LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + ++  + L+     R   +     S ++SP+S  IV  S+R G   +Y ++ +  +  R
Sbjct: 200 LRVWDTNTLKQKNEFRRGQSQADVYSLNFSPNSELIVTNSNR-GTVHIYGVEGDSENYNR 258

Query: 341 ISQ 343
            S+
Sbjct: 259 PSR 261



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 6/110 (5%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +GK       ++ ++ +  V+L++ +   +   + +  + ++SPDS  +V  S +     
Sbjct: 144 DGKMIAFPSYQEGSIKL--VNLETQSEREVQAHIHMVSTMAFSPDSRSLVTASAQG--TL 199

Query: 328 LYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           L V  +N   QK   +  +  A  +   +SP  +LI      G     GV
Sbjct: 200 LRVWDTNTLKQKNEFRRGQSQADVYSLNFSPNSELIVTNSNRGTVHIYGV 249


>gi|268638236|ref|XP_002649195.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
 gi|256013076|gb|EEU04145.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
          Length = 507

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 15/121 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---P 263
                Q++    FSP+ +  A A++D         +     ++ K +GNFR  + A    
Sbjct: 390 LTGHQQLINLVSFSPDGRYFASASFDKS-------IKLWDGQSGKFLGNFRGHVGAVYQV 442

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFES-D 321
            +SS+ +  + S  KD  + I+  D+++   E+ L        +  +SPD  ++   S D
Sbjct: 443 CWSSDSRYLV-SGSKDSTLKIW--DIKTKKMEKELPGHADEVYTVDWSPDGDRVASGSKD 499

Query: 322 R 322
           R
Sbjct: 500 R 500



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 49/153 (32%), Gaps = 7/153 (4%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   LIS   D  + +++  +   +  RLT    +    S+SPD       S     + +
Sbjct: 362 GMEILISGSDDFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFASASF---DKSI 418

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +    + +   WS     +  +        I  +K    ++ L   
Sbjct: 419 KLWDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLV-SGSKDSTLKIWDIKTKKMEKELPGH 477

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +    WSP G  +        D   +++++
Sbjct: 478 ADEVYTVDWSPDGDRVA---SGSKDRLLRIWTV 507



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 47/143 (32%), Gaps = 8/143 (5%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA- 293
           D   +    +    +  R+   + +I    FS +G+    S   D+++ ++  D QS   
Sbjct: 372 DFTVIMWNPSVTKTSISRLTGHQQLINLVSFSPDGRYFA-SASFDKSIKLW--DGQSGKF 428

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                  +       +S DS  +V  S       L +        ++         +   
Sbjct: 429 LGNFRGHVGAVYQVCWSSDSRYLVSGSK---DSTLKIWDIKTKKMEKELPGHADEVYTVD 485

Query: 354 WSPQGDLIAFTKFSGEKFAIGVM 376
           WSP GD +A +        I  +
Sbjct: 486 WSPDGDRVA-SGSKDRLLRIWTV 507



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 37/92 (40%), Gaps = 7/92 (7%)

Query: 198 RDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            DG + ++L         +++  +S + + +   + D      + + D +  +  K +  
Sbjct: 421 WDGQSGKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDS----TLKIWDIKTKKMEKELPG 476

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
               +    +S +G R   S  KD  + I++V
Sbjct: 477 HADEVYTVDWSPDGDRVA-SGSKDRLLRIWTV 507



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 7/82 (8%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
               R  +++  +  A    ++SPD    V      G   + +     S      +    
Sbjct: 127 RPVTRCASSMSGHTEAVLNCAFSPDGKGFV---SVGGDTTVRIWDIYTSTPTHTLKGHTN 183

Query: 348 SYFDPVWSPQGDLIAFTKFSGE 369
                 WSP    IA     G+
Sbjct: 184 WVLQVAWSPDSKKIATAGMEGD 205



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/189 (11%), Positives = 59/189 (31%), Gaps = 24/189 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +    FSP+ +              V + D         +    + +L   +S
Sbjct: 136 MSGHTEAVLNCAFSPDGKGFVSV----GGDTTVRIWDIYTSTPTHTLKGHTNWVLQVAWS 191

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--------FINISAS-YSPDSSQIV 317
            + K+   +   +  + I+    Q+   ++L +TL         ++      +P   ++ 
Sbjct: 192 PDSKKIA-TAGMEGDIRIWC--PQTG--KQLGSTLKGHTKFITGLSWEPFHLNPKCVRLA 246

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S ++   +++    +    K +      +         G+ + ++        +    
Sbjct: 247 -SSSKDSTIRIW----DTESCKNLMSLSGHTMSVTCLKWGGEGLIYSGSQDRTVRVF-NT 300

Query: 378 KDGSQERLL 386
            DG   R+L
Sbjct: 301 TDGRLVRVL 309


>gi|170119087|ref|XP_001890700.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164634280|gb|EDQ98653.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 302

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 45/115 (39%), Gaps = 8/115 (6%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             D  +    FSP+ + +   + D    +RV+   T         G     + +  FS +
Sbjct: 109 GHDDYVTSVAFSPDGRHIVSGSDD--KTVRVWDAQTGQSVMDPLKG-HDDYVTSVAFSPD 165

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESD 321
           G+  + S  +D+ + ++  D Q+  +    L        S ++S D   IV  SD
Sbjct: 166 GRHIV-SGSEDKTVRVW--DAQTGQSVMDPLKGHDDWVTSVAFSSDGRHIVSGSD 217



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 53/150 (35%), Gaps = 12/150 (8%)

Query: 219 FSPNQQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           F+P   K++            +++   +   ++   R+      + +  FS +G+  + S
Sbjct: 70  FAPQSSKISLHFLKLFQKTLTVQIGQREHWSEKCFLRLVGHDDYVTSVAFSPDGRHIV-S 128

Query: 276 VQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              D+ + ++  D Q+  +    L        S ++SPD   IV  S+    + + V  +
Sbjct: 129 GSDDKTVRVW--DAQTGQSVMDPLKGHDDYVTSVAFSPDGRHIVSGSE---DKTVRVWDA 183

Query: 334 NGSDQKR-ISQDKEASYFDPVWSPQGDLIA 362
                     +  +       +S  G  I 
Sbjct: 184 QTGQSVMDPLKGHDDWVTSVAFSSDGRHIV 213



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 36/114 (31%), Gaps = 10/114 (8%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVW 354
           RL        S ++SPD   IV  SD    + + V  +          +  +       +
Sbjct: 106 RLVGHDDYVTSVAFSPDGRHIVSGSD---DKTVRVWDAQTGQSVMDPLKGHDDYVTSVAF 162

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLI 405
           SP G  I           + V      Q     L   D  + +  +S  GR ++
Sbjct: 163 SPDGRHIVSGSEDKT---VRVWDAQTGQSVMDPLKGHDDWVTSVAFSSDGRHIV 213



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 63/189 (33%), Gaps = 9/189 (4%)

Query: 170 KGDFNSRILFVSESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKV 226
             D+ + + F  +    VSG    ++ V D + G ++       D  +    FSP+ + +
Sbjct: 110 HDDYVTSVAFSPDGRHIVSGSDDKTVRVWDAQTGQSVMDPLKGHDDYVTSVAFSPDGRHI 169

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
              + D    +RV+   T         G     + +  FSS+G+  +      +   +  
Sbjct: 170 VSGSED--KTVRVWDAQTGQSVMDPLKG-HDDWVTSVAFSSDGRHIV---SGSDHKTVRV 223

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D        L      + +    PD++ +++  D+      +   +       IS    
Sbjct: 224 WDACDFYDIPLLKFCHYDRNWIMLPDNAHLLWLPDQNKSGLFWPRTTALIGAIPISLQFN 283

Query: 347 ASYFDPVWS 355
                  WS
Sbjct: 284 NFVHGINWS 292


>gi|330835506|ref|YP_004410234.1| peptidase S9 prolyl oligopeptidase [Metallosphaera cuprina Ar-4]
 gi|329567645|gb|AEB95750.1| peptidase S9 prolyl oligopeptidase [Metallosphaera cuprina Ar-4]
          Length = 537

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 87/248 (35%), Gaps = 24/248 (9%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +DVKD +      +     S R   H + +   +          SR+  V++    G   
Sbjct: 14  YDVKDGR----LAYVVLKDSPRVYIHGLGEIEIKEPESVHWV-RSRLGVVADQG--GAEI 66

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            S+ ++D    ++ Y   S     F+P F   + K  + +  D++ + +YL +   D   
Sbjct: 67  RSIYLID----DVPYPLLSDGHDNFDPVFI-TEDKFYFLSNRDKETIHLYLYE---DGQI 118

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASY 309
            +I    S +     S  G+    S       D   + L +   E  T +        S 
Sbjct: 119 TKISKGSSPVSDVCVSPGGRWIAYSS---GIYDNDLILLDTKLEEEFTLSFSNSEQYPSS 175

Query: 310 SPD--SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S     + ++F S+  G   +  +     +   I  D +  Y   +W    D + +T  +
Sbjct: 176 SQCFYGNSLLFLSNHRGFLDIGKLSLKDREITWIVTDDKDKYEALMW---RDRLVYTVDN 232

Query: 368 GEKFAIGV 375
               ++ V
Sbjct: 233 QGDISLYV 240


>gi|323448827|gb|EGB04721.1| hypothetical protein AURANDRAFT_55071 [Aureococcus anophagefferens]
          Length = 550

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 72/210 (34%), Gaps = 22/210 (10%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP------SRDQILFEPRFSPNQQ 224
           G  + R +F S S    I   +L  +  D    +  T            +   R+ P+  
Sbjct: 340 GGHHGRDVFASCSTDRTIAVCALSDLGVDHEPAKATTTPLQVLVGHADEVNAIRWDPSGS 399

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK-------RALISVQ 277
            +A  + D      V++      R   R  +    I   R+S  G        R   S  
Sbjct: 400 LLASCSDDH----NVFVWQLGQSRPVYRFSDHVEEIYTIRWSPMGASDSNAPFRLA-SAS 454

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++  ++       L N      + ++SPD + +   S   G  QL +   +  D
Sbjct: 455 FDATVRLWDTEI-GVCANTLRNHTKKVYTIAFSPDGTMLA--SGSLGG-QLNIWSVSTGD 510

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             R      A  F+  W+ +G+ +A T  +
Sbjct: 511 LIRTFNHGSADIFEVAWNAKGNRLAATSTN 540



 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 86/302 (28%), Gaps = 34/302 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI--------- 213
           +      +  F+ R   + + +++G     + V D     ++     RD I         
Sbjct: 238 HSLAAHSESIFSLRFDAMGKRLLTGSYDKCVSVWDVQTGTLKGQVEQRDAIAQVFYGTNL 297

Query: 214 -LFEPRF-SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            L +PRF       V   +     +     +  R+   P  IG      +    S++ + 
Sbjct: 298 KLIQPRFLMLIGSMVLRVSCVCVCVCVCVCVCVRVWHVPACIGGHHGRDVFASCSTD-RT 356

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +    D  +D       +   + L        +  + P  S +   SD      ++V 
Sbjct: 357 IAVCALSDLGVDHEPAKATTTPLQVLVGHADEVNAIRWDPSGSLLASCSD---DHNVFVW 413

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-------- 383
           Q   S       D     +   WSP G        S   F +     D +          
Sbjct: 414 QLGQSRPVYRFSDHVEEIYTIRWSPMG-----ASDSNAPFRLASASFDATVRLWDTEIGV 468

Query: 384 ---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
               L      +    +SP G  L  S    G     ++S+       T  +  A   + 
Sbjct: 469 CANTLRNHTKKVYTIAFSPDGTMLA-SGSLGGQ--LNIWSVSTGDLIRTFNHGSADIFEV 525

Query: 441 QW 442
            W
Sbjct: 526 AW 527


>gi|294673972|ref|YP_003574588.1| OmpA family protein [Prevotella ruminicola 23]
 gi|294472547|gb|ADE81936.1| OmpA family protein [Prevotella ruminicola 23]
          Length = 679

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 53/160 (33%), Gaps = 27/160 (16%)

Query: 299 NTLFINISASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKR-------ISQDKEAS 348
           N+ F   +  +SPD   I      +D        +M S  SD          IS D   S
Sbjct: 231 NSAFDEGACCFSPDGKTIYLTQCQTDPNYPRYARIMVSRRSDAAWSKPQELIISNDTTCS 290

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF---AIGVMKK-----DGSQERL---LVEDSNLQAPTW 397
           +  P  SP G  + F            I   +       G  E L   +    +   PT+
Sbjct: 291 FAHPAVSPDGQWLYFVSNMSGGMGGLDIWRCRLLSATEAGVMENLGAPINTPGDEMFPTF 350

Query: 398 SPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETLINTPAY 436
            P+G    FS     G  G  +Y    +GR    IN P Y
Sbjct: 351 RPNGDF-YFSSNGHPGLGGLDVY-FTTDGRK---INHPGY 385



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 43/221 (19%), Positives = 73/221 (33%), Gaps = 59/221 (26%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS-QIVFES 320
           AP +   G     +V++        +D        L N+   + S   + D+  Q+ F S
Sbjct: 147 APAWKKEGS--AYTVKR--------MD--------LFNSRRDDYSPMLAGDADDQLYFTS 188

Query: 321 DREGKEQLYVMQSNG-----------------SDQKRISQDKEASY--FDPVWSPQGDLI 361
            R   +   +    G                    + I+ +  +++      +SP G  I
Sbjct: 189 TRNQAQGDELNGITGTKSADIFYAQKDEKGKWGKPQVIASELNSAFDEGACCFSPDGKTI 248

Query: 362 AFTK-FSGEKF----AIGVMKKDGS-----QERLLVEDSNLQ--APTWSPSGRSLIFSRK 409
             T+  +   +     I V ++  +     QE ++  D+      P  SP G+ L F   
Sbjct: 249 YLTQCQTDPNYPRYARIMVSRRSDAAWSKPQELIISNDTTCSFAHPAVSPDGQWLYFVSN 308

Query: 410 KDGDTGS------KLYSIDLNGRNETL---INTPAYASDPQ 441
             G  G       +L S    G  E L   INTP     P 
Sbjct: 309 MSGGMGGLDIWRCRLLSATEAGVMENLGAPINTPGDEMFPT 349



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 45/147 (30%), Gaps = 23/147 (15%)

Query: 203 IRYLTPSRDQILF--EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK--------R 252
            + L  S D       P  SP+ Q + + +     +  + +   R+  A +         
Sbjct: 278 PQELIISNDTTCSFAHPAVSPDGQWLYFVSNMSGGMGGLDIWRCRLLSATEAGVMENLGA 337

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-------NI 305
             N     + P F  NG         +    +  +D+      R  N           + 
Sbjct: 338 PINTPGDEMFPTFRPNGD---FYFSSNGHPGLGGLDVYFTTDGRKINHPGYPLNSQADDF 394

Query: 306 SASYSPDSSQIVFESDRE---GKEQLY 329
             ++    +Q  F S+R    G + +Y
Sbjct: 395 GMTFEGKLNQGFFCSNRGDLRGFDHIY 421


>gi|195996583|ref|XP_002108160.1| hypothetical protein TRIADDRAFT_52348 [Trichoplax adhaerens]
 gi|190588936|gb|EDV28958.1| hypothetical protein TRIADDRAFT_52348 [Trichoplax adhaerens]
          Length = 299

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 68/230 (29%), Gaps = 19/230 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D +         +     +   FSP+ + +A  ++       + L           
Sbjct: 80  IRIWDLEFGKQIRSIDAGAVDTWTLAFSPDSKFIATGSHSG----AINLYAVENGNKDNT 135

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSP 311
           +       ++  +S +G+    S   D  ++I+  DLQ+     +L        S  +S 
Sbjct: 136 LETHGKFTMSVAYSPDGRYLA-SGAIDGIVNIF--DLQTGKLAHKLEGHAMAVRSLQFSF 192

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           DS  +   SD      + +   + +          +      ++P       +       
Sbjct: 193 DSQYLATASD---DTHIKLYDIHQAALVATFSGHSSWVLSIDFNPDNKQFVTSSSDKT-- 247

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLY 419
            + V      Q      D   Q  + + +  G  ++       D    +Y
Sbjct: 248 -VKVWDLGRRQCIHTFHDHTDQVWSAAYNDTGNKIVSVSD---DKNIHIY 293



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 23/79 (29%), Gaps = 1/79 (1%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +       Q R         +   +SP    IA    SG    +  ++       L 
Sbjct: 79  HIRIWDLEFGKQIRSIDAGAVDTWTLAFSPDSKFIATGSHSG-AINLYAVENGNKDNTLE 137

Query: 387 VEDSNLQAPTWSPSGRSLI 405
                  +  +SP GR L 
Sbjct: 138 THGKFTMSVAYSPDGRYLA 156



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 61/189 (32%), Gaps = 10/189 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ +   +  N      +  +      +SP+ + +A    D      V + D +
Sbjct: 115 TGSHSGAINLYAVENGNKDNTLETHGKFTMSVAYSPDGRYLASGAIDG----IVNIFDLQ 170

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +   ++      + + +FS + +    +   D  + +Y +   +      +      +
Sbjct: 171 TGKLAHKLEGHAMAVRSLQFSFDSQYLA-TASDDTHIKLYDIHQAALVAT-FSGHSSWVL 228

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S  ++PD+ Q V  S     + + V             D     +   ++  G+ I    
Sbjct: 229 SIDFNPDNKQFVTSSS---DKTVKVWDLGRRQCIHTFHDHTDQVWSAAYNDTGNKIVSVS 285

Query: 366 FSGEKFAIG 374
              +   I 
Sbjct: 286 -DDKNIHIY 293


>gi|332533720|ref|ZP_08409579.1| putative transcriptional regulator [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332036884|gb|EGI73345.1| putative transcriptional regulator [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 712

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 77/207 (37%), Gaps = 19/207 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN   VA +   +E +  V L+         +I    + I    +S + +RA+ SV+  
Sbjct: 204 SPNNSTVALSFLGEEQLDSVLLLKNLNTGQEIKISEANANISPAGWSIDSERAIYSVESK 263

Query: 280 EAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE----SDREGKEQLYVMQSN 334
              +++ V L SNA    L N        + S D++ +V+      +R     L     +
Sbjct: 264 GKCELWEVGLTSNADSNFLFNCESSQPINAISIDNNSLVYSKYGYRNRSELSVLVNRNLS 323

Query: 335 GSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             ++ +IS     SY D    +    + I F +       + +   +G  +  L E  N 
Sbjct: 324 TGEEFQISSPNLNSYGDKFLYFIKNKNKIIFERHQFNSSELYMTDLEGGAQIKLYETKNR 383

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                       I+S     +T S L+
Sbjct: 384 ------------IWSINYQKETDSLLW 398


>gi|281340066|gb|EFB15650.1| hypothetical protein PANDA_004415 [Ailuropoda melanoleuca]
          Length = 288

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 58/152 (38%), Gaps = 9/152 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ +++  A+ D      VY  +T+  R   R+      +   RFS +G R   +  
Sbjct: 6   AFSPDGRRLLTASEDG----CVYGWETQSGRLLWRLSGHAGPVKFCRFSPDG-RLFATTS 60

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++ V  ++     L        + S+SPDS Q+         +++ + +     
Sbjct: 61  CDCTIRLWDV-AETKCLHVLKGHQRSVETVSFSPDSKQLA---SGGWDKRVKLWEVQSGQ 116

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             R   D   S     ++P  D +A   +   
Sbjct: 117 MLRHLGDHRDSIQSSDFAPGSDSLATGSWDST 148



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 64/204 (31%), Gaps = 14/204 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +        +   RFSP+ +  A  + D      + L D    +    +   +  +    
Sbjct: 35  WRLSGHAGPVKFCRFSPDGRLFATTSCD----CTIRLWDVAETKCLHVLKGHQRSVETVS 90

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS + K+   S   D+ + ++ V         L +      S+ ++P S  +   S    
Sbjct: 91  FSPDSKQLA-SGGWDKRVKLWEVQ-SGQMLRHLGDHRDSIQSSDFAPGSDSLATGS---W 145

Query: 325 KEQLYVMQSNGSDQ---KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              + +            +  +    +     +S  G L+A   +  +   I        
Sbjct: 146 DSTICIWDLRMGTPVIFHQELEGHSGNISCLCYSASG-LLASGSWD-KTIHIWKPSTRSL 203

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
             +L    + +++  +SP    L 
Sbjct: 204 LVQLKGHVTWVKSIAFSPDASQLA 227



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 74/220 (33%), Gaps = 16/220 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
             ++ + D       ++     + +    FSP+ +++A   +D     RV L + +  + 
Sbjct: 62  DCTIRLWDVAETKCLHVLKGHQRSVETVSFSPDSKQLASGGWDK----RVKLWEVQSGQM 117

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISA 307
            + +G+ R  I +  F+        +   D  + I+ + + +     + L          
Sbjct: 118 LRHLGDHRDSIQSSDFAPGSDSLA-TGSWDSTICIWDLRMGTPVIFHQELEGHSGNISCL 176

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            YS         +     + +++ + +        +          +SP    +A    +
Sbjct: 177 CYSASG----LLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPDASQLA---SA 229

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
           G    + V   +  +    ++       A  ++P G+ L+
Sbjct: 230 GYSHMVKVWDCNTGKCIETLKGVLDVAHACAFTPDGKLLV 269



 Score = 36.9 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 5/119 (4%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +Q + G  G+ +      S  + SG    ++ +      ++          +    FSP+
Sbjct: 163 HQELEGHSGNISCLCYSASGLLASGSWDKTIHIWKPSTRSLLVQLKGHVTWVKSIAFSPD 222

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
             ++A A Y       V + D    +  + +     +  A  F+ +GK  L+S   D+A
Sbjct: 223 ASQLASAGYSH----MVKVWDCNTGKCIETLKGVLDVAHACAFTPDGK-LLVSGAADQA 276


>gi|260772744|ref|ZP_05881660.1| hypothetical protein VIB_001200 [Vibrio metschnikovii CIP 69.14]
 gi|260611883|gb|EEX37086.1| hypothetical protein VIB_001200 [Vibrio metschnikovii CIP 69.14]
          Length = 933

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 54/328 (16%), Positives = 112/328 (34%), Gaps = 28/328 (8%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V  ++   G  +       + +A T  ++  Q+   +   +    LF++ S      K+ 
Sbjct: 216 VAHKRLPFGSNYLYGAYFVQYLAKTYGEESVQAFLTDYSGYLVPGLFLNLSARHIFGKDF 275

Query: 193 LCVM------------DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             +             D+  +N  +     D   FE   + ++  +     + +D   + 
Sbjct: 276 FALWEEFRADLNTQFADQLTSNEAFTYHELDAQPFEYLLAHDRDTLIAWRQNGDDRANLA 335

Query: 241 LMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALIS---VQKDEAMDIYSVDLQSNATE 295
             DT+  +    +   +  S+   P      +  ++S      D  +            +
Sbjct: 336 QWDTKRGQWQSLVSTKSLTSIDSHPT-----QGLVVSQINSYVDGRVFNDLYRYVDGQWQ 390

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           RLT      + A +S D   I     ++G  +L+ ++ NG   +    +      D   S
Sbjct: 391 RLTEQQRF-VQARWSNDGLSIFAVRHQQGLAELWQIELNGKQTQLWQGEANWVLGDMAVS 449

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDT 414
           P GD+ A  K   + + I    +       + E +  +   +++  G  L+FS    G  
Sbjct: 450 PNGDIYAAVKAPFQSWNIMRFDQPTQSWMAVTETAATEHQLSFTAQGD-LLFSADYTGR- 507

Query: 415 GSKLYSIDLNGRN-ETLINTPAYASDPQ 441
             ++Y +DL     E L      A  PQ
Sbjct: 508 -YQIYRLDLQTNIVEQLTAEIGGAFSPQ 534



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 82/265 (30%), Gaps = 41/265 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA--------YATYDDEDILRVYLMD 243
            L  ++ +G   +      + +L +   SPN    A        +     +   + ++  
Sbjct: 421 ELWQIELNGKQTQLWQGEANWVLGDMAVSPNGDIYAAVKAPFQSWNIMRFDQPTQSWMAV 480

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T       ++           F++ G   L S        IY +DLQ+N  E+LT  +  
Sbjct: 481 TETAATEHQL----------SFTAQGD-LLFSADYTGRYQIYRLDLQTNIVEQLTAEIGG 529

Query: 304 NISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             S    P+   IV+++ + +G     V    G     +S    A+  +         IA
Sbjct: 530 AFSPQSGPEG--IVYQAYEHDGYHLRRVENPQGLADIPLSTLPVANTVNAAP------IA 581

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKD----GDTGSK 417
               + +    G         R          P W S   +SL           G    +
Sbjct: 582 TITATEKSQPTGYSPLSTLAPR-------YWVPVWQSDDNQSLFGVATSGSDVLGRHQYE 634

Query: 418 LYSIDLNGRNETLINTPAYASDPQW 442
           + +   + +N        Y  D +W
Sbjct: 635 IMAA-WDSKNAFAAYQLGYQYDNRW 658


>gi|237721305|ref|ZP_04551786.1| dipeptidyl peptidase IV [Bacteroides sp. 2_2_4]
 gi|229449101|gb|EEO54892.1| dipeptidyl peptidase IV [Bacteroides sp. 2_2_4]
          Length = 719

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 70/198 (35%), Gaps = 42/198 (21%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            NI+ + P  D   +  + + +  ++   ++   + + V    +       +  NF S  
Sbjct: 21  ENIQGVIPMPDGEHYT-QMNADGTQIIKYSFKTGEKVEVIFDVSTTRECDFK--NFDSYQ 77

Query: 261 LAPRFSSNGKRALIS------VQKDEAMDIYSVDLQ--------SNATERLTNTLFINIS 306
               FS +G++ LI+       +       Y   L+        +N  ERL++       
Sbjct: 78  ----FSPDGQKLLIATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDG-GPQQV 132

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---YFDPVW--------- 354
             +SPD + I F  +        V    G+ + +I++D + +      P W         
Sbjct: 133 PVFSPDGTMIAFVRN---NNIFLVKLLYGNSESQITEDGKQNSVLNGIPDWVYEEEFGFD 189

Query: 355 -----SPQGDLIAFTKFS 367
                S    LIAF +F 
Sbjct: 190 RALEFSADNTLIAFIRFD 207



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 45/161 (27%), Gaps = 33/161 (20%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-------SYFDPVWSPQGDLI- 361
            PD     +        Q+        ++  +  D          ++    +SP G  + 
Sbjct: 29  MPDGEH--YTQMNADGTQIIKYSFKTGEKVEVIFDVSTTRECDFKNFDSYQFSPDGQKLL 86

Query: 362 -------AFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSR 408
                   +         I  +K++            L +    Q P +SP G  + F R
Sbjct: 87  IATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQVPVFSPDGTMIAFVR 146

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASD-----PQWVG 444
             +      LY     G +E+ I      +      P WV 
Sbjct: 147 NNNIFLVKLLY-----GNSESQITEDGKQNSVLNGIPDWVY 182



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 38/168 (22%)

Query: 219 FSPNQQKVA------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           FSP+ QK+             Y        L+        +   +R+ +     + P FS
Sbjct: 78  FSPDGQKLLIATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQV-PVFS 136

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------------------FINISAS 308
            +G        ++  + +  + L  N+  ++T                       + +  
Sbjct: 137 PDGTMIAFV--RNNNIFLVKL-LYGNSESQITEDGKQNSVLNGIPDWVYEEEFGFDRALE 193

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDP 352
           +S D++ I F    E +   Y          RI        E +Y  P
Sbjct: 194 FSADNTLIAFIRFDESEVPSYSFPVFAGQAPRIDALKDYPGEYTYKYP 241



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 77/249 (30%), Gaps = 54/249 (21%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F         + I     +P  + +  + A      +   +  +++ V   
Sbjct: 9   DLKDITSGRFRP-------ENIQGVIPMPDGEHYTQMNADGTQIIKYSFKTGEKVEV--- 58

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             ++  +    
Sbjct: 59  IFDVSTTRECDFKNFDSYQFSPDGQKLLIATKTTPIYRHSYT-----AVHYIYPLKRNDK 113

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   +A+   ++     ++L+    
Sbjct: 114 GVTTNNIIERLSDGGPQQV-----------PVFSPDGTMIAFVRNNN-----IFLVKLLY 157

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +  +I                          A  FS++          +  +  YS  
Sbjct: 158 GNSESQITEDGKQNSVLNGIPDWVYEEEFGFDRALEFSADNTLIAFIRFDESEVPSYSFP 217

Query: 289 LQSNATERL 297
           + +    R+
Sbjct: 218 VFAGQAPRI 226


>gi|225683011|gb|EEH21295.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 824

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 80/249 (32%), Gaps = 23/249 (9%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   +   F+       + +  L     D   +R   P RD  L     S +   VA A+
Sbjct: 62  GIVATNDSFIMGGEDGTVWRYELETGQMDKLLVRCALPVRDLSL-----SKDGDWVAVAS 116

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D    L V +++       K +      +    F  +G+   +S   D  + +YSVD  
Sbjct: 117 DD----LVVKIVNIHDMTIVKYLREQSKGVKHVTFDPSGRFIAVSGS-DGIIYVYSVDGP 171

Query: 291 --------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                        RL         A + P+     F +    ++   V  S+ + Q    
Sbjct: 172 QPELVKKIDGIIGRLETDNEATSRAVWHPEGR--AFVAVEPTRDIAIVAVSDWTKQNVFP 229

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
               A      WSP G L+A    +G    I + +    +     +  N+    W P   
Sbjct: 230 AGHNADITALAWSPNGALLA---SAGADRQIVLWETKTQKILRRYDIPNVINLAWHPVDN 286

Query: 403 SLIFSRKKD 411
           +L F+    
Sbjct: 287 TLSFTTSDG 295


>gi|212636054|ref|YP_002312579.1| transcriptional regulator [Shewanella piezotolerans WP3]
 gi|212557538|gb|ACJ29992.1| Transcriptional regulatory protein [Shewanella piezotolerans WP3]
          Length = 740

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/308 (13%), Positives = 103/308 (33%), Gaps = 38/308 (12%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL--CVMDRDGANIRYLTPSRDQI 213
           HTI++ IY S+    G  +  + ++      G     L   ++  D   +     +    
Sbjct: 90  HTINNHIY-SLRRNLGKLDPDVKYIHTVTGGGTSGYRLSETLVHYDDTQLPNDESAELVT 148

Query: 214 LFEPRFSPNQQKVAYATYDDEDIL--------------RVYLMDTRIDRAPKRIGNFRSM 259
           +  P  + + +K++  T     ++                  + T   +  +++ +    
Sbjct: 149 VTTPTVAND-KKISKKTQRFGRLMFAAIVAVVCFTVLGYSQFIQTTDYKDVQQLTDLPGR 207

Query: 260 ILAPRFSSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             +   +++G   +     + Q+   +   S+D  S + +   +    +   S +P   +
Sbjct: 208 EQSASVAADGNFFVYANKKTKQQAWELFASSMDNPSKSVKVFNSEGNRDNFPSIAPSGQK 267

Query: 316 IVFESDREGKEQLYVMQSN-----GSDQKRISQDKEASYFDPVWSPQGDLIAF----TKF 366
           I F   ++G+E +YV   +      S ++R+   +  +    +         +      +
Sbjct: 268 IAFHRLKDGEEGIYVATFDRSTLKASQERRVIALEPNNLSTSISWLDETHFYYSIHEVSW 327

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRSLIFSR-KKDGDTGSKLYSI 421
           + +K  I +          +   +      +    SP  + +   R     D    LY I
Sbjct: 328 APKK--IYLFDISSGLSEQVSSPALNSHGDFANTVSPDKQWMAILRADSYWDIELILYDI 385

Query: 422 DLNGRNET 429
            +N   ET
Sbjct: 386 TINRFIET 393


>gi|328875452|gb|EGG23816.1| hypothetical protein DFA_05952 [Dictyostelium fasciculatum]
          Length = 1541

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/231 (13%), Positives = 82/231 (35%), Gaps = 21/231 (9%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++V+      + + D  G  +        Q ++    S + +++A A++D        +
Sbjct: 983  NNLVTVSRDKRVVLWDEYGKVLHE-FNGHSQAVWGVAVSGDGRRIASASWDM----TCIV 1037

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             D    +    +    + + A  +S + +    +      + I+  D  +   ++L +T 
Sbjct: 1038 WDIASKQIAFTLTGHTNKLSAVAYSPDSRLIA-TGCWSGIVIIW--DAVTG--KQLQSTK 1092

Query: 302  FINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              + +     +SPD   ++  S  +    +   ++N S +    +  + +     WS  G
Sbjct: 1093 VSDTTILYLMFSPD-EMLLSASCVDSFTHILARRNNWSKEIAKLEGHKEAVISSRWSADG 1151

Query: 359  DLIAFTKFSGEKFAIGVMK-KDGSQERLLV-EDSNLQAPTWSPSG--RSLI 405
              I           + V    D SQ  ++      + +  + P+   R +I
Sbjct: 1152 KFIVSCSDDKT---VRVFDCADWSQASVMTGHSGRIISAAFHPNSSKRRII 1199



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/310 (14%), Positives = 103/310 (33%), Gaps = 49/310 (15%)

Query: 126  VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL---FVSE 182
            V+++  +++    ++ ++ ++ P     + H+++D            + ++     FV  
Sbjct: 865  VQYQAHNIERYPLVVAQQAYNLPDD--SVCHSVADRHLWQTKAPHFKWLNKPQLSDFVIA 922

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA--YATYDDEDILRVY 240
            S+          +   DG  I   +  R   +    +S     +   +     + I  + 
Sbjct: 923  SLAGHEDFVRCALYREDGNMIASCSDDRSIRI----WSGETGALVRVFPKLHTDKITNLQ 978

Query: 241  LMD-------------TRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDI 284
                               D   K +  F      +     S +G+R   S   D    +
Sbjct: 979  WRGNNNLVTVSRDKRVVLWDEYGKVLHEFNGHSQAVWGVAVSGDGRRIA-SASWDMTCIV 1037

Query: 285  YSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            +  D+ S      LT       + +YSPDS  I       G   + +  +    Q + ++
Sbjct: 1038 W--DIASKQIAFTLTGHTNKLSAVAYSPDSRLIA-TGCWSG--IVIIWDAVTGKQLQSTK 1092

Query: 344  DKEASYFDPVWSPQGDLIA------FTKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              + +    ++SP   L++      FT        ++  + K +G +E ++         
Sbjct: 1093 VSDTTILYLMFSPDEMLLSASCVDSFTHILARRNNWSKEIAKLEGHKEAVISS------- 1145

Query: 396  TWSPSGRSLI 405
             WS  G+ ++
Sbjct: 1146 RWSADGKFIV 1155


>gi|195645904|gb|ACG42420.1| WD-repeat protein-like [Zea mays]
          Length = 446

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 66/205 (32%), Gaps = 14/205 (6%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           T  D+   +        +  + F++ +  SG+    +           +     +  +  
Sbjct: 228 TYDDNAITNAVEIFNTSSGAVHFMASNNDSGVRYYDMERFQL------FKHFQFEWPVNH 281

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              SP+++ V        D     L+D    +    I   R    A  +S +G+    + 
Sbjct: 282 ASLSPDRKVVVIV----GDDPDGLLIDANSGKTVHSIKGHRDYSFASAWSPDGRTFA-TG 336

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D+   I+ V   S +   L   L    S  ++ D     F S  E  + +++      
Sbjct: 337 NQDKTCRIWDVRNLSKSVHVLRGNLGAIRSIRFTSDGQ---FMSMAEPADFVHIYDVKSD 393

Query: 337 DQKRISQDKEASYFDPVWSPQGDLI 361
             KR   D         +SP  D +
Sbjct: 394 YNKRQELDFFGEISGTSFSPDTDTL 418



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 53/138 (38%), Gaps = 7/138 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDR 322
             S + K  +I     +  D   +D  S  T   +      + ++++SPD        ++
Sbjct: 283 SLSPDRKVVVIV---GDDPDGLLIDANSGKTVHSIKGHRDYSFASAWSPDGRTFA-TGNQ 338

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +   +++ ++ N S    + +    +     ++  G  ++  + +     I  +K D ++
Sbjct: 339 DKTCRIWDVR-NLSKSVHVLRGNLGAIRSIRFTSDGQFMSMAEPAD-FVHIYDVKSDYNK 396

Query: 383 ERLLVEDSNLQAPTWSPS 400
            + L     +   ++SP 
Sbjct: 397 RQELDFFGEISGTSFSPD 414



 Score = 40.0 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 38/132 (28%), Gaps = 6/132 (4%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           AS SPD   +V   D        ++ +N        +      F   WSP G   A    
Sbjct: 282 ASLSPDRKVVVIVGD---DPDGLLIDANSGKTVHSIKGHRDYSFASAWSPDGRTFATGNQ 338

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                   V     S   L      +++  ++  G+   F    +      +Y +  +  
Sbjct: 339 DKTCRIWDVRNLSKSVHVLRGNLGAIRSIRFTSDGQ---FMSMAEPADFVHIYDVKSDYN 395

Query: 427 NETLINTPAYAS 438
               ++     S
Sbjct: 396 KRQELDFFGEIS 407


>gi|154284794|ref|XP_001543192.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150406833|gb|EDN02374.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 445

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 66/203 (32%), Gaps = 44/203 (21%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-----------SSNGK 270
           +   +  AT+       V ++  +I    ++ G +   ++ P F           S +GK
Sbjct: 109 DASSLLVATHLPFSCTIVTILGFQITSQKQKTGAYFKNLIEPGFGKITLASDPVSSPDGK 168

Query: 271 RALIS------VQKDEAMDIYSVDLQSNATERLTN-----TLFINISASYSPDSSQIVFE 319
                      ++      I  ++  + A  R+         + NI   +SPD +QI F 
Sbjct: 169 LVAFVGKTWRKLEGQPESRICLIEATAGAVLRIVGEDSQPAPYQNIQPQFSPDGTQISFL 228

Query: 320 SDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           S+R GK         G    +   +S  +  S     W      +           +G+ 
Sbjct: 229 SNRGGKGGYRCYLLRGQNFGELAEVSDIETVSVEYARWHSDSAKLL----------LGIA 278

Query: 377 KKDGSQERLLVEDSNLQAPTWSP 399
              GS E           P+W+P
Sbjct: 279 GPRGSDE---------DIPSWTP 292



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 12/91 (13%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKKD-GSQERLLVEDSN---- 391
             K     DPV SP G L+AF   +  K        I +++   G+  R++ EDS     
Sbjct: 152 FGKITLASDPVSSPDGKLVAFVGKTWRKLEGQPESRICLIEATAGAVLRIVGEDSQPAPY 211

Query: 392 -LQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               P +SP G  + F   + G  G + Y +
Sbjct: 212 QNIQPQFSPDGTQISFLSNRGGKGGYRCYLL 242



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 90/288 (31%), Gaps = 46/288 (15%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYA-----TYDDEDILRVYLMDTRIDRAPKRIGNF 256
           N+      +  +  +P  SP+ + VA+        + +   R+ L++       + +G  
Sbjct: 146 NLIEPGFGKITLASDPVSSPDGKLVAFVGKTWRKLEGQPESRICLIEATAGAVLRIVGED 205

Query: 257 ----RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SAS 308
                   + P+FS +G +      +          L+      L     I       A 
Sbjct: 206 SQPAPYQNIQPQFSPDGTQISFLSNRGGKGGYRCYLLRGQNFGELAEVSDIETVSVEYAR 265

Query: 309 YSPDSSQIVF------ESDRE---GKEQLYVMQSNGSDQKRISQD------------KEA 347
           +  DS++++        SD +      ++     +G+ +  +  D             +A
Sbjct: 266 WHSDSAKLLLGIAGPRGSDEDIPSWTPEIQADSCDGTLRSLVVYDSVKEQNLHAIRFPQA 325

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIG-----VMKKDGSQERLLV---EDSNLQAPTWSP 399
           S ++  W     ++A       + A       V+      ER++              S 
Sbjct: 326 SVWEAGWCGPSHVVAVVSDGFSESAWYSCRVSVLDLFRGTERIIYIPPSPCQAGGVVSSK 385

Query: 400 SGRSLIFS---RKKDGDTGSKLYSIDLNGRNETLINTPA-YASDPQWV 443
           SG+   F+       G     +  +D++      ++      ++  W+
Sbjct: 386 SGKYAAFTQALSNTRGKVVGIVMIVDVDSSEAWQLDVEGVDVTNISWL 433


>gi|116625709|ref|YP_827865.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228871|gb|ABJ87580.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 910

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 69/177 (38%), Gaps = 21/177 (11%)

Query: 267 SNGKRALIS-VQKDE-AMDIYSVDLQSNATERLTNTL---FINISA-SYSPDSSQIVFES 320
               +   + + +D   +D+   D  S   + L       +I         + S++VF S
Sbjct: 413 PGSDKLYFTRLSRDMKRLDVCVADSASGEVKPLIQERMNVYIESKPLKVINNGSELVFWS 472

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAI 373
           +R+G    Y+  ++G+ + +I+Q +  +  D  +  +     F   SG +          
Sbjct: 473 ERDGWGHYYLYGADGTLKNQITQGEFVAE-DVSYVDEKGREMFLTASGREDGEDPYFMHF 531

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPS-GRSLI--FSRKKDGDTGSKLYSIDLNGRN 427
              K DGS  +LL +  +      +   G+  +  FSR  +    S LY  D +G N
Sbjct: 532 YRAKLDGSGMKLL-DPGDASHAVITSDSGKYFVDNFSR-VNSAPKSVLY--DASGAN 584


>gi|332019821|gb|EGI60282.1| Notchless protein-like protein 1 [Acromyrmex echinatior]
          Length = 481

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 55/129 (42%), Gaps = 12/129 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                Q++ + +FSP+ + +A A++D      + L ++        +      + +  +S
Sbjct: 364 MTGHQQLINDVKFSPDGRLIASASFDK----SIKLWESNTGTYIASLRGHVQAVYSIAWS 419

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
           ++  R L+S   D  + ++S+  ++    + L        +  +SPD  ++       GK
Sbjct: 420 AD-SRLLVSGSADSTLKVWSI--KTKKLSQDLPGHADEVYAVDWSPDGLRVA----SGGK 472

Query: 326 EQLYVMQSN 334
           +++  +  N
Sbjct: 473 DKVLRLWQN 481



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 47/132 (35%), Gaps = 6/132 (4%)

Query: 232 DDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L     ++ P  R+   + +I   +FS +G+    S   D+++ ++  +  
Sbjct: 342 SGSDDFTLFLWKPEKEKKPIARMTGHQQLINDVKFSPDGRLIA-SASFDKSIKLWESN-T 399

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 L   +    S ++S DS  +V  S       L V         +         +
Sbjct: 400 GTYIASLRGHVQAVYSIAWSADSRLLVSGS---ADSTLKVWSIKTKKLSQDLPGHADEVY 456

Query: 351 DPVWSPQGDLIA 362
              WSP G  +A
Sbjct: 457 AVDWSPDGLRVA 468



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 52/151 (34%), Gaps = 7/151 (4%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+  L+S   D  + ++  + +     R+T    +     +SPD   I   S     + +
Sbjct: 336 GEEKLVSGSDDFTLFLWKPEKEKKPIARMTGHQQLINDVKFSPDGRLIASASF---DKSI 392

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            + +SN        +    + +   WS    L+  +  +     +  +K     + L   
Sbjct: 393 KLWESNTGTYIASLRGHVQAVYSIAWSADSRLLV-SGSADSTLKVWSIKTKKLSQDLPGH 451

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
              + A  WSP G  +        D   +L+
Sbjct: 452 ADEVYAVDWSPDGLRVA---SGGKDKVLRLW 479



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 59/184 (32%), Gaps = 14/184 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +    FSP+ + +A  + D      V L D             R  +L   +S
Sbjct: 116 LEGHKEAVISVAFSPDGKHLASGSGDT----TVRLWDIYTQTPHYTCEGHRHWVLCIAWS 171

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP--DSSQIVFESDR 322
           S G +   S  K+  + ++  D  +     + +T       S  + P   + + ++ +  
Sbjct: 172 SCGTKLA-SACKNGLIYLW--DPNTGKQIGKPMTGHRMWVTSLCWEPYHKNPECMYLASS 228

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                + +  +  +   R+      S     W   G  + ++        +   + DG  
Sbjct: 229 SKDCDVRIWDTKRAQTCRVLSGHTKSVTCVKW--GGSGLIYSASQDRTIKVWRAE-DGVL 285

Query: 383 ERLL 386
            R L
Sbjct: 286 CRTL 289


>gi|330810033|ref|YP_004354495.1| c-type cytochrome (NirN) [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378141|gb|AEA69491.1| putative c-type cytochrome (NirN) [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 498

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 95/262 (36%), Gaps = 29/262 (11%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D      L      +  +P+ S +   + +   +  D   V ++D        R  +  +
Sbjct: 111 DTRRSHRLLADVASLPDKPQHSADPLNL-FVVVEAGD-HHVDIVDGDRFEVLARFASHFA 168

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINI-SASYSPDSSQI 316
           +   P+FS +G+    +  +D  + +Y + +L   A  R      +N  + + S D   +
Sbjct: 169 VHGGPKFSPDGRFVYFA-SRDGWISLYDLHNLTLIAEVR----AGLNTRNLAVSKDGRWV 223

Query: 317 VFESDREGKEQLYVMQSNG----SDQKRISQDKEASYFDPVWS--PQGDLIAFTKFSGEK 370
           +  +   G   L V+ +           +  D +AS    V++  P+   I   K   E 
Sbjct: 224 LVGNTLPGN--LVVLDARDLSLVKTIATVGLDGQASRVSAVYTAPPRNSFIVALKDVKEV 281

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           + +          R +  +  L   ++SP  R L+ + +K    G ++  +D  GR  T 
Sbjct: 282 WELSTGPSPDFVPRRIEAEDYLDDFSFSPDYRQLLATSRKA--QGGQVIDLD-TGRIVTD 338

Query: 431 INTPA---------YASDPQWV 443
           I  P          +  D  WV
Sbjct: 339 IALPGMPHLGSGTYWKRDGHWV 360



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 48/271 (17%), Positives = 96/271 (35%), Gaps = 31/271 (11%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           S    R+ +H +  D+       +   +   LFV        +     ++D D   +   
Sbjct: 108 SEDDTRR-SHRLLADVASLPDKPQHSADPLNLFVVVEAGDHHVD----IVDGDRFEVLAR 162

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             S   +   P+FSP+ + V +A+ D   I    L +  +    +   N R++      S
Sbjct: 163 FASHFAVHGGPKFSPDGRFVYFASRD-GWISLYDLHNLTLIAEVRAGLNTRNL----AVS 217

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-----ISASYS--PDSSQIVFE 319
            +G+  L+         +  +D +  +  +   T+ ++     +SA Y+  P +S IV  
Sbjct: 218 KDGRWVLVGNTLPGN--LVVLDARDLSLVKTIATVGLDGQASRVSAVYTAPPRNSFIVAL 275

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            D +   +L    S     +RI  +     F   +SP    +  T    +     V+  D
Sbjct: 276 KDVKEVWELSTGPSPDFVPRRIEAEDYLDDF--SFSPDYRQLLATSRKAQGGQ--VIDLD 331

Query: 380 GSQERLLVEDSNLQAP------TWSPSGRSL 404
               R++ + +    P       W   G  +
Sbjct: 332 TG--RIVTDIALPGMPHLGSGTYWKRDGHWV 360



 Score = 36.9 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 26/143 (18%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +  ++S D                     +     R+  D  +    P  S    L  F 
Sbjct: 103 VEPTWSED---------------------DTRRSHRLLADVASLPDKPQHSADP-LNLFV 140

Query: 365 KFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                   + ++  D  +   R     +    P +SP GR + F+ +    +   L+++ 
Sbjct: 141 VVEAGDHHVDIVDGDRFEVLARFASHFAVHGGPKFSPDGRFVYFASRDGWISLYDLHNLT 200

Query: 423 LNGRNETLINTP--AYASDPQWV 443
           L       +NT   A + D +WV
Sbjct: 201 LIAEVRAGLNTRNLAVSKDGRWV 223


>gi|301310719|ref|ZP_07216658.1| conserved hypothetical protein [Bacteroides sp. 20_3]
 gi|300832293|gb|EFK62924.1| conserved hypothetical protein [Bacteroides sp. 20_3]
          Length = 1334

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 58/145 (40%), Gaps = 22/145 (15%)

Query: 268 NGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIV------ 317
           +G RA+ +    D+  +++ V L     ++L +    ++     +Y PD   I       
Sbjct: 431 DGDRAMFTQTMPDKRWNVFEVKLDGTGFKQLIHNEEPDLEFYDGTYLPDGRIIANSNIGY 490

Query: 318 ----FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                 S  +    + +   +    +R++ D++A++ +PV    G  + +T++       
Sbjct: 491 QGVPCVSGDDPVGNMVLYTPDTKSLRRLTFDQDANW-NPVVMNNGR-VMYTRWEYTDLTH 548

Query: 374 GV------MKKDGSQERLLVEDSNL 392
                   M  DG++++ L    ++
Sbjct: 549 YYSRIVMNMNPDGTEQKALYGSGSM 573


>gi|302842869|ref|XP_002952977.1| hypothetical protein VOLCADRAFT_93777 [Volvox carteri f.
           nagariensis]
 gi|300261688|gb|EFJ45899.1| hypothetical protein VOLCADRAFT_93777 [Volvox carteri f.
           nagariensis]
          Length = 533

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 60/179 (33%), Gaps = 10/179 (5%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N   +       ++   FS +   +A  + D   IL      +R++     +G     +
Sbjct: 143 TNTVQVLDQHTDEVWHVAFSHDGTMLATGSKDRTAILWSVHQRSRLELM-HVLGGHSQPV 201

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
               +S + ++ +          +   D+ +    +  ++      S ++ PDS +  F 
Sbjct: 202 ALLCWSPDDRKIITCS----GETLRVWDVATGQLLQSCSHHRETVSSCAWLPDSRR--FV 255

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           S    +  + V  ++G + +R    +     D   +  G ++         F + +   
Sbjct: 256 SGSADRSLILVDSTSGRELQR--WKRTYRVQDMAITRGGGMLVLASTERRVFLLRLSDM 312


>gi|297815402|ref|XP_002875584.1| hypothetical protein ARALYDRAFT_905380 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297321422|gb|EFH51843.1| hypothetical protein ARALYDRAFT_905380 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 952

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 68/228 (29%), Gaps = 21/228 (9%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
              +       +     S +   +A  + D      V L           I  F   I  
Sbjct: 54  PPTILRHHQDGVTALALSNDSTFLASGSIDH----CVKLYKFPSGEFQTNITRFTLPIRV 109

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             F+ +G     +   +    I + D   +    L           + P+   +    D 
Sbjct: 110 LAFNGSGSLLAAAGDDEGIKLINTFD--GSIVRVLKGHKGPVTGLDFHPNGELLA-SIDT 166

Query: 323 EGKEQLY-----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            G    +     ++          +    +    P WSP G ++A     G +  + +  
Sbjct: 167 TGTVLCWELQNGIVSFTLKGVAPDTGFNTSIVNIPRWSPDGRILAV---PGLRNDVVMYD 223

Query: 378 KDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   ++   +   +L+A    TW+P+G+ +        D    L+ +D
Sbjct: 224 RFTGEKLFALRGDHLEAICYLTWAPNGKYIA---TSGLDKQVLLWDVD 268



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/198 (14%), Positives = 62/198 (31%), Gaps = 22/198 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +    +     +   +  + V+   T     P  + + +  + A   S++      S   
Sbjct: 25  WDHKAEHFV-TSSSTDPSISVHDGLTPSTLPPTILRHHQDGVTALALSNDSTFLA-SGSI 82

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + +Y           +T         +++   S +    D EG   + ++ +     
Sbjct: 83  DHCVKLYKFP-SGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEG---IKLINTFDGSI 138

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE-----------KFAIGVMKKDGSQERLLV 387
            R+ +  +       + P G+L+A    +G             F +  +  D        
Sbjct: 139 VRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGIVSFTLKGVAPDTG-----F 193

Query: 388 EDSNLQAPTWSPSGRSLI 405
             S +  P WSP GR L 
Sbjct: 194 NTSIVNIPRWSPDGRILA 211



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 55/144 (38%), Gaps = 18/144 (12%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNF 256
            DG+ +R L   +  +     F PN + +A  + D    +  + +   I     K +   
Sbjct: 134 FDGSIVRVLKGHKGPVTGL-DFHPNGELLA--SIDTTGTVLCWELQNGIVSFTLKGVAPD 190

Query: 257 RSMILA----PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----S 308
                +    PR+S +G+   +   ++   D+   D  +   E+L      ++ A    +
Sbjct: 191 TGFNTSIVNIPRWSPDGRILAVPGLRN---DVVMYDRFTG--EKLFALRGDHLEAICYLT 245

Query: 309 YSPDSSQIVFESDREGKEQLYVMQ 332
           ++P+   I   S  + +  L+ + 
Sbjct: 246 WAPNGKYIA-TSGLDKQVLLWDVD 268


>gi|271964938|ref|YP_003339134.1| hypothetical protein Sros_3455 [Streptosporangium roseum DSM 43021]
 gi|270508113|gb|ACZ86391.1| WD40 repeat-domain-containing protein-like protein [Streptosporangium
            roseum DSM 43021]
          Length = 1205

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/313 (13%), Positives = 85/313 (27%), Gaps = 56/313 (17%)

Query: 91   ITNPDSIPRFQDWNSLGAQVLVTG------------------RVIKEGKDRLRVE----- 127
              +  S      W +LG   + TG                   V+      + V      
Sbjct: 813  PGHERSPQVLTAWRALGRHTVRTGLRAAWPTTTFSGHRIYVDSVVLSADGTIAVSSGGDG 872

Query: 128  -FRLWDVKDR---KQIIGKKFFSSPASWR---------------KIAHTISDDIYQSITG 168
              R+WDV      + + G     +  S                 ++ H  + +  + +  
Sbjct: 873  TIRIWDVAGGACERVLEGHSSMVNDISLSADTQRVLSAGHDGRLRLWHAGTGECLRVLFA 932

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                  S   +         + N L   D  DG  +R +      +      SP+++   
Sbjct: 933  STHGATSARFYDGGRQALAAVNNRLQFWDLADGRLLRTVED--CGLAHSIWVSPDER--- 987

Query: 228  YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                      ++ L D    R  + +      + +   S++G+  +          I   
Sbjct: 988  -VAVTTGRSRKILLWDLGRRRRLRTLEGHDDQVSSVSMSADGRSVV----SCGRGYIRLW 1042

Query: 288  DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            D+ S    R+       + A  S D     F    +    L V   +     R  +  + 
Sbjct: 1043 DVVSGECVRVLEHPGHPLKARLSTDGR---FALSADSDSSLRVWDVHSGQMLRALEGHQR 1099

Query: 348  SYFDPVWSPQGDL 360
               D  ++P G  
Sbjct: 1100 RIGDIAFAPDGSF 1112



 Score = 39.6 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 75/219 (34%), Gaps = 21/219 (9%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            S +   +A ++  D     + + D       + +    SM+     S++ +R L S   D
Sbjct: 859  SADG-TIAVSSGGDG---TIRIWDVAGGACERVLEGHSSMVNDISLSADTQRVL-SAGHD 913

Query: 280  EAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++     +      L  +     SA +     Q +         +L          
Sbjct: 914  GRLRLW--HAGTGECLRVLFASTHGATSARFYDGGRQALAAV----NNRLQFWDLADG-- 965

Query: 339  KRISQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            + +   ++      +W SP  + +A T     K  +  + +      L   D  + + + 
Sbjct: 966  RLLRTVEDCGLAHSIWVSPD-ERVAVTTGRSRKILLWDLGRRRRLRTLEGHDDQVSSVSM 1024

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            S  GRS++      G    +L+ + ++G    ++  P +
Sbjct: 1025 SADGRSVV----SCGRGYIRLWDV-VSGECVRVLEHPGH 1058


>gi|170728097|ref|YP_001762123.1| peptidase S9B dipeptidylpeptidase IV subunit [Shewanella woodyi
           ATCC 51908]
 gi|169813444|gb|ACA88028.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           woodyi ATCC 51908]
          Length = 768

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/278 (15%), Positives = 81/278 (29%), Gaps = 81/278 (29%)

Query: 220 SPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------------- 264
           SP+ ++V Y     D++    ++ MD    +    +   +  I                 
Sbjct: 79  SPDGKRVTYLAGRKDNQHFYDLWQMDVASGKQSILLNADKLTIGELSDEEKARRERQRIY 138

Query: 265 --------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                   +S + K  LI         +Y   L  N    L         A  SP    +
Sbjct: 139 GQGIMEYFWSDDSKALLIPASG----VLYYYSLSDNKVTLLPTGEGFATDARLSPKGHYV 194

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQGDL 360
            F  D    + L+V+  +      ++ D   +  + +                WSP    
Sbjct: 195 SFVRD----QNLFVLSLSDMKVTALTTDGGGAIKNAMAEFVAQEEMGRMTGYWWSPDETA 250

Query: 361 IAFTKFSGE------------------------------KFAIGVMKKDGSQERL--LVE 388
           IA+T+                                  K A+GV+K    +     L +
Sbjct: 251 IAYTRIDESDVELVTRNEIYADGIKLTEQRYPYAGKNNVKVALGVIKLSSQKVTWVDLGK 310

Query: 389 DSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           + ++  P   W P  + L +  +       +L  +D++
Sbjct: 311 EQDIYLPRVKWLPDSKRLSYQWQSRDQQTLELRVVDID 348



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 75/229 (32%), Gaps = 42/229 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDR-------------------------APKR 252
            +SP++  +AY   D+ D+  V   +   D                          + ++
Sbjct: 243 WWSPDETAIAYTRIDESDVELVTRNEIYADGIKLTEQRYPYAGKNNVKVALGVIKLSSQK 302

Query: 253 IGNF----RSMILAPR--FSSNGKRALISVQKDE--AMDIYSVDLQ-SNATERLTNTLF- 302
           +          I  PR  +  + KR     Q  +   +++  VD+   +  + L      
Sbjct: 303 VTWVDLGKEQDIYLPRVKWLPDSKRLSYQWQSRDQQTLELRVVDIDKGDRAKNLVEERSE 362

Query: 303 ----INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               +N    +  +    ++ S+R+G   LY+   +G  + +++              + 
Sbjct: 363 AWINLNDDLHFLKEQDSFIWASERDGFNHLYLFGLDGKIKTQLTSGHWVVDGVEFVDEKS 422

Query: 359 DLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             I FT       +  +  +   G +   + +   + +  ++   +++ 
Sbjct: 423 GWIYFTGRKDTAVEQHLYRVPLAGGEVEGVSQRRGMHSVVFA-DNQAVY 470



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 67/210 (31%), Gaps = 59/210 (28%)

Query: 261 LAPR---FSSNGKRALISVQKDEA---MDIYSVDLQSNATE------RLTNTLFIN---- 304
            +PR    S +GKR      + +     D++ +D+ S          +LT     +    
Sbjct: 71  TSPRGLKLSPDGKRVTYLAGRKDNQHFYDLWQMDVASGKQSILLNADKLTIGELSDEEKA 130

Query: 305 ------------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                       +   +S DS  ++  +       LY    + +    +    E    D 
Sbjct: 131 RRERQRIYGQGIMEYFWSDDSKALLIPA----SGVLYYYSLSDNKVTLL-PTGEGFATDA 185

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQA 394
             SP+G  ++F +       + V+     +   L  D                    +  
Sbjct: 186 RLSPKGHYVSFVRDQ----NLFVLSLSDMKVTALTTDGGGAIKNAMAEFVAQEEMGRMTG 241

Query: 395 PTWSPSGRSLIFSRKKDGD----TGSKLYS 420
             WSP   ++ ++R  + D    T +++Y+
Sbjct: 242 YWWSPDETAIAYTRIDESDVELVTRNEIYA 271



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 87/300 (29%), Gaps = 92/300 (30%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + + +            V    +  D     +          R S  G        +
Sbjct: 147 WSDDSKALLIPASG------VLYYYSLSDNKVTLLPTGEGFATDARLSPKGHYVSFVRDQ 200

Query: 279 DEAMDIYSVDLQSNATERLTNT-----------------LFINISASYSPDSSQIVFE-- 319
           +    ++ + L       LT                   +       +SPD + I +   
Sbjct: 201 N----LFVLSLSDMKVTALTTDGGGAIKNAMAEFVAQEEMGRMTGYWWSPDETAIAYTRI 256

Query: 320 --SDRE----------------------GKEQ----LYVMQSNGSDQKRISQDKEASYFD 351
             SD E                      GK      L V++ +      +   KE   + 
Sbjct: 257 DESDVELVTRNEIYADGIKLTEQRYPYAGKNNVKVALGVIKLSSQKVTWVDLGKEQDIYL 316

Query: 352 PV--WSPQGDLIAFT--KFSGEKFAIGVMKKD-GSQERLLVEDSNL-------------Q 393
           P   W P    +++       +   + V+  D G + + LVE+ +              +
Sbjct: 317 PRVKWLPDSKRLSYQWQSRDQQTLELRVVDIDKGDRAKNLVEERSEAWINLNDDLHFLKE 376

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ--------WVGF 445
             ++       I++ ++DG   + LY   L+G+ +T + +  +  D          W+ F
Sbjct: 377 QDSF-------IWASERDG--FNHLYLFGLDGKIKTQLTSGHWVVDGVEFVDEKSGWIYF 427


>gi|302527467|ref|ZP_07279809.1| predicted protein [Streptomyces sp. AA4]
 gi|302436362|gb|EFL08178.1| predicted protein [Streptomyces sp. AA4]
          Length = 646

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 69/207 (33%), Gaps = 34/207 (16%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESD 321
           F+ +G+    +V  D +M+I  VD +     RL    F +   +   +S D    V    
Sbjct: 344 FNHDGRLLA-TVNADFSMEILDVDTRKPVGRRL--GPFPDAVPAERAFSLDGVSFVAARM 400

Query: 322 REGKEQLYVMQSNGS---DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           +  +  +   ++          + +  + +   P  SP G L+A    S ++  +  +  
Sbjct: 401 KSTQLTVQTWEARTGKETGAPLVLEGVDVNGSWPSLSPDGSLVAVPMASPQRIELWRVAD 460

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLI---FSRKKDGDTGSKLY---SIDLNGRN----- 427
                 +    +  Q   +SP GR+L    +    D      L+   S+   G       
Sbjct: 461 HTRVGSIATSSTFRQH-GFSPDGRTLAVYQWDGHFDHRGQVSLWDTASLKAEGDPITMAE 519

Query: 428 -------------ETLINTPAYASDPQ 441
                         TLI T   A +P 
Sbjct: 520 NDRLCCFAFRPDGRTLITTSGDAREPA 546



 Score = 39.6 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 42/271 (15%), Positives = 82/271 (30%), Gaps = 30/271 (11%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG--ANIRYLTPSRDQILFEPRFSPNQQK 225
            E+      + FV+  + S  +        R G       +    D     P  SP+   
Sbjct: 384 AERAFSLDGVSFVAARMKSTQLTVQTWEA-RTGKETGAPLVLEGVDVNGSWPSLSPDGSL 442

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           VA      + I    + D     +      FR       FS +G+   +           
Sbjct: 443 VAVPMASPQRIELWRVADHTRVGSIATSSTFRQH----GFSPDGRTLAVYQWDGHFDHRG 498

Query: 286 SVDL-QSNATE----RLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            V L  + + +     +T  +  N      ++ PD   ++  S  + +E   V Q + + 
Sbjct: 499 QVSLWDTASLKAEGDPIT--MAENDRLCCFAFRPDGRTLITTSG-DAREPAKVHQWDTAA 555

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVEDSNLQAP- 395
            K +   +      P    QG+   +  F         ++        +L  D   +   
Sbjct: 556 HKEL---RPGFTLAPTQIDQGNGTVWLTFVLPGLDDQHLLALSAGTLVVLRLDGKQEGAG 612

Query: 396 -------TWSPSGRSLIFSRKKDGDTGSKLY 419
                  + SP G+++  +     DT   L+
Sbjct: 613 LPGIAALSVSPDGKTVATTSGSTADTTVHLW 643



 Score = 36.9 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 62/193 (32%), Gaps = 17/193 (8%)

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR----YL 206
           WR   HT    I  S T  +  F+     ++     G   +   V   D A+++     +
Sbjct: 456 WRVADHTRVGSIATSSTFRQHGFSPDGRTLAVYQWDGHFDHRGQVSLWDTASLKAEGDPI 515

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T + +  L    F P+ + +   + D  +  +V+  DT   +  +         LAP   
Sbjct: 516 TMAENDRLCCFAFRPDGRTLITTSGDAREPAKVHQWDTAAHKELR-----PGFTLAPTQI 570

Query: 267 SNGK-RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-------SYSPDSSQIVF 318
             G     ++       D + + L +     L        +        S SPD   +  
Sbjct: 571 DQGNGTVWLTFVLPGLDDQHLLALSAGTLVVLRLDGKQEGAGLPGIAALSVSPDGKTVAT 630

Query: 319 ESDREGKEQLYVM 331
            S       +++ 
Sbjct: 631 TSGSTADTTVHLW 643


>gi|299148532|ref|ZP_07041594.1| dipeptidyl-peptidase IV [Bacteroides sp. 3_1_23]
 gi|298513293|gb|EFI37180.1| dipeptidyl-peptidase IV [Bacteroides sp. 3_1_23]
          Length = 736

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 70/198 (35%), Gaps = 42/198 (21%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            NI+ + P  D   +  + + +  ++   ++   + + V    +       +  NF S  
Sbjct: 38  ENIQGVIPMPDGEHYT-QMNADGTQIIKYSFKTGEKVEVIFDVSTTRECDFK--NFDSYQ 94

Query: 261 LAPRFSSNGKRALIS------VQKDEAMDIYSVDLQ--------SNATERLTNTLFINIS 306
               FS +G++ LI+       +       Y   L+        +N  ERL++       
Sbjct: 95  ----FSPDGQKLLIATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDG-GPQQV 149

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---YFDPVW--------- 354
             +SPD + I F  +        V    G+ + +I++D + +      P W         
Sbjct: 150 PVFSPDGTMIAFVRN---NNIFLVKLLYGNSESQITEDGKQNSVINGIPDWVYEEEFGFD 206

Query: 355 -----SPQGDLIAFTKFS 367
                S    LIAF +F 
Sbjct: 207 RALEFSADNTLIAFIRFD 224



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 45/161 (27%), Gaps = 33/161 (20%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-------SYFDPVWSPQGDLI- 361
            PD     +        Q+        ++  +  D          ++    +SP G  + 
Sbjct: 46  MPDGEH--YTQMNADGTQIIKYSFKTGEKVEVIFDVSTTRECDFKNFDSYQFSPDGQKLL 103

Query: 362 -------AFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSR 408
                   +         I  +K++            L +    Q P +SP G  + F R
Sbjct: 104 IATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQVPVFSPDGTMIAFVR 163

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASD-----PQWVG 444
             +      LY     G +E+ I      +      P WV 
Sbjct: 164 NNNIFLVKLLY-----GNSESQITEDGKQNSVINGIPDWVY 199



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 38/168 (22%)

Query: 219 FSPNQQKVA------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           FSP+ QK+             Y        L+        +   +R+ +     + P FS
Sbjct: 95  FSPDGQKLLIATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQV-PVFS 153

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------------------FINISAS 308
            +G        ++  + +  + L  N+  ++T                       + +  
Sbjct: 154 PDGTMIAFV--RNNNIFLVKL-LYGNSESQITEDGKQNSVINGIPDWVYEEEFGFDRALE 210

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDP 352
           +S D++ I F    E +   Y          RI        E +Y  P
Sbjct: 211 FSADNTLIAFIRFDESEVPSYSFPVFAGQAPRIDALKDYPGEYTYKYP 258



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 33/249 (13%), Positives = 77/249 (30%), Gaps = 54/249 (21%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F         + I     +P  + +  + A      +   +  +++ V   
Sbjct: 26  DLKDITSGRFRP-------ENIQGVIPMPDGEHYTQMNADGTQIIKYSFKTGEKVEV--- 75

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             ++  +    
Sbjct: 76  IFDVSTTRECDFKNFDSYQFSPDGQKLLIATKTTPIYRHSYT-----AVHYIYPLKRNDK 130

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   +A+   ++     ++L+    
Sbjct: 131 GVTTNNIIERLSDGGPQQV-----------PVFSPDGTMIAFVRNNN-----IFLVKLLY 174

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +  +I                          A  FS++          +  +  YS  
Sbjct: 175 GNSESQITEDGKQNSVINGIPDWVYEEEFGFDRALEFSADNTLIAFIRFDESEVPSYSFP 234

Query: 289 LQSNATERL 297
           + +    R+
Sbjct: 235 VFAGQAPRI 243


>gi|302505874|ref|XP_003014894.1| protease DPPV, putative [Arthroderma benhamiae CBS 112371]
 gi|306755735|sp|D4ARB1|DPP5_ARTBC RecName: Full=Probable dipeptidyl-peptidase 5; AltName:
           Full=Dipeptidyl-peptidase V; Short=DPP V; Short=DppV;
           Flags: Precursor
 gi|291178465|gb|EFE34254.1| protease DPPV, putative [Arthroderma benhamiae CBS 112371]
          Length = 726

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 66/186 (35%), Gaps = 33/186 (17%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-------YSPDSSQIVFESDREG 324
           A+ S    +  D YS D +     +                    S D   + F S    
Sbjct: 188 AVFSGALTKNGDKYSFDGKLKNLVQPVKYAESPYPPFGGSGDYDLSSDGKTVAFMSKAPE 247

Query: 325 KEQ-------LYVMQSNGS---------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             +       ++++  +GS         +  R  Q  E +   PV+SP G  IA+ + + 
Sbjct: 248 LPKANLTTSYIFLVPHDGSRVAEPINKRNGPRTPQGIEGASSSPVFSPDGKRIAYLQMAT 307

Query: 369 EKFA-----IGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYS 420
           + +      I + +   ++    +  +  ++P    WS  GR+L  + +       KL++
Sbjct: 308 KNYESDRRVIHIAEVGSNKPVQRIASNWDRSPEAVKWSSDGRTLYVTAEDH--ATGKLFT 365

Query: 421 IDLNGR 426
           +  + R
Sbjct: 366 LPADAR 371



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 75/237 (31%), Gaps = 37/237 (15%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S  IY S+      +++ +     +V SG +  +      DG     + P +      P 
Sbjct: 166 SARIYDSLFVRH--WDTYVSTQFNAVFSGALTKNGDKYSFDGKLKNLVQPVKYAESPYPP 223

Query: 219 F--------SPNQQKVAYAT---------------YDDEDILRVYLMDTRIDRAPKRIGN 255
           F        S + + VA+ +               +                  P+    
Sbjct: 224 FGGSGDYDLSSDGKTVAFMSKAPELPKANLTTSYIFLVPHDGSRVAEPINKRNGPRTPQG 283

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISAS-- 308
                 +P FS +GKR        +  +     I+  ++ SN   +   +   + S    
Sbjct: 284 IEGASSSPVFSPDGKRIAYLQMATKNYESDRRVIHIAEVGSNKPVQRIASN-WDRSPEAV 342

Query: 309 -YSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLI 361
            +S D   +   ++     +L+ + ++  D    + +  D   S F  V S +  LI
Sbjct: 343 KWSSDGRTLYVTAEDHATGKLFTLPADARDNHKPEVVKHDGSVSSFYFVGSSKSVLI 399


>gi|312194409|ref|YP_004014470.1| pentapeptide repeat protein [Frankia sp. EuI1c]
 gi|311225745|gb|ADP78600.1| pentapeptide repeat protein [Frankia sp. EuI1c]
          Length = 2027

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 55/323 (17%), Positives = 103/323 (31%), Gaps = 36/323 (11%)

Query: 108  AQVLVTGRVIKE---GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
            A VL T  V ++            RLWD +   Q+       S       A +++DD   
Sbjct: 1651 ADVLATAFVPEQSLVAAASENGSLRLWDTRTAAQV----HIGSGEKAWCYAMSLTDDA-T 1705

Query: 165  SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
             +    GD   RI  +S                 D         +R   +    FSP+  
Sbjct: 1706 LLAAGGGDGLVRIYELSPGRAGDGR--------SDLDTPVRRLNTRRTPVRALAFSPDTT 1757

Query: 225  KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
             +A    D      V L +         +      +L   FS +G+R   +      + +
Sbjct: 1758 ILAVGHPDG----TVGLWNPWTGHPMATLKAGGLRVLTVAFSPDGERLA-AGTDTGTVHV 1812

Query: 285  Y----SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            +    +    + A  RL        + ++SPDS  +   S   G   + +  +     + 
Sbjct: 1813 WDAVGARGGSAAAARRLVGHSDWVNAVAFSPDSELLASGS---GSGTVRIWDAATGVLRN 1869

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWS 398
                         ++P G L+A     GE   + +       E  RL      +++  ++
Sbjct: 1870 RLVGHGGRVRTIAFAPDGRLLA---AGGEDGIVRLWDPGTGSELARLAGHTEEIRSVAFN 1926

Query: 399  PSGRSLIFSRKKDGDTGSKLYSI 421
             +G  L+       D  ++L+ +
Sbjct: 1927 AAGDVLV---SGGADGTARLWQV 1946



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 79/213 (37%), Gaps = 21/213 (9%)

Query: 211  DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
              + +    SP+   +AY T        V L D         +      I A  FS++G 
Sbjct: 1357 SGLRWTQALSPSHDLLAYGTGHH-----VALEDLADGHVLAVLRGRGEWIRAVAFSADGS 1411

Query: 271  RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            R   +      + ++ V   +              + ++SPD S +      EG+  ++ 
Sbjct: 1412 RLA-AGDVAGGIQLWDV-AAAEEVASFVGHASRVRALAFSPDGSLLA-TGCWEGRVHVW- 1467

Query: 331  MQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               + +   R++   +++       +SP G L+A+    G++  +  ++       L   
Sbjct: 1468 ---DLATLTRVATLHKSADRIKTLQFSPDGTLLAY----GDEVRLWDVRTRSDLSVLGKP 1520

Query: 389  DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                +   +SP G  L +    +G+  ++++++
Sbjct: 1521 TEQARTLRFSPDGTLLAWV---NGENTARVWNL 1550



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 93/273 (34%), Gaps = 30/273 (10%)

Query: 117  IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKG---DF 173
             +     +    +LWDV   +++    F    +  R +A +  D    +    +G    +
Sbjct: 1411 SRLAAGDVAGGIQLWDVAAAEEVA--SFVGHASRVRALAFS-PDGSLLATGCWEGRVHVW 1467

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRY---------LTPSRDQILFEP------- 217
            +   L    ++     +        DG  + Y          T S   +L +P       
Sbjct: 1468 DLATLTRVATLHKSADRIKTLQFSPDGTLLAYGDEVRLWDVRTRSDLSVLGKPTEQARTL 1527

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            RFSP+   +A+   + E+  RV+ +    +   +R  +  +  LA  F  +G    I   
Sbjct: 1528 RFSPDGTLLAWV--NGENTARVWNLAAGREVGRRRGDHHFARALA--FDPSGSLVAI-GA 1582

Query: 278  KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D  + ++  DL  ++    L           +     + +    R+G  Q++ +     
Sbjct: 1583 DDGTIRVW--DLAGDSLRTTLRAARGWVTILEFVGAEGKALIAGTRDGTVQVWKVTDGAP 1640

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
              + +   + A      + P+  L+A    +G 
Sbjct: 1641 PGRTLLTGRTADVLATAFVPEQSLVAAASENGS 1673


>gi|260171658|ref|ZP_05758070.1| dipeptidyl peptidase IV [Bacteroides sp. D2]
 gi|315919971|ref|ZP_07916211.1| dipeptidyl peptidase IV [Bacteroides sp. D2]
 gi|313693846|gb|EFS30681.1| dipeptidyl peptidase IV [Bacteroides sp. D2]
          Length = 736

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 70/198 (35%), Gaps = 42/198 (21%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            NI+ + P  D   +  + + +  ++   ++   + + V    +       +  NF S  
Sbjct: 38  ENIQGVIPMPDGEHYT-QMNADGTQIIKYSFKTGEKVEVIFDVSTTRECDFK--NFDSYQ 94

Query: 261 LAPRFSSNGKRALIS------VQKDEAMDIYSVDLQ--------SNATERLTNTLFINIS 306
               FS +G++ LI+       +       Y   L+        +N  ERL++       
Sbjct: 95  ----FSPDGQKLLIATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDG-GPQQV 149

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---YFDPVW--------- 354
             +SPD + I F  +        V    G+ + +I++D + +      P W         
Sbjct: 150 PVFSPDGTMIAFVRN---NNIFLVKLLYGNSESQITEDGKQNSVINGIPDWVYEEEFGFD 206

Query: 355 -----SPQGDLIAFTKFS 367
                S    LIAF +F 
Sbjct: 207 RALEFSADNTLIAFIRFD 224



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 45/161 (27%), Gaps = 33/161 (20%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-------SYFDPVWSPQGDLI- 361
            PD     +        Q+        ++  +  D          ++    +SP G  + 
Sbjct: 46  MPDGEH--YTQMNADGTQIIKYSFKTGEKVEVIFDVSTTRECDFKNFDSYQFSPDGQKLL 103

Query: 362 -------AFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSR 408
                   +         I  +K++            L +    Q P +SP G  + F R
Sbjct: 104 IATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQVPVFSPDGTMIAFVR 163

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASD-----PQWVG 444
             +      LY     G +E+ I      +      P WV 
Sbjct: 164 NNNIFLVKLLY-----GNSESQITEDGKQNSVINGIPDWVY 199



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 38/168 (22%)

Query: 219 FSPNQQKVA------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           FSP+ QK+             Y        L+        +   +R+ +     + P FS
Sbjct: 95  FSPDGQKLLIATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQV-PVFS 153

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------------------FINISAS 308
            +G        ++  + +  + L  N+  ++T                       + +  
Sbjct: 154 PDGTMIAFV--RNNNIFLVKL-LYGNSESQITEDGKQNSVINGIPDWVYEEEFGFDRALE 210

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDP 352
           +S D++ I F    E +   Y          RI        E +Y  P
Sbjct: 211 FSADNTLIAFIRFDESEVPSYSFPVFAGQAPRIDALKDYPGEYTYKYP 258



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 79/247 (31%), Gaps = 50/247 (20%)

Query: 72  DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
           DL+     ++ S+    + I     +P  + +  + A      +   +  +++ V   ++
Sbjct: 26  DLK-----DITSRRFRPENIQGVIPMPDGEHYTQMNADGTQIIKYSFKTGEKVEV---IF 77

Query: 132 DVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           DV   ++   K    +  SP   + +  T +  IY+             ++  +    G+
Sbjct: 78  DVSTTRECDFKNFDSYQFSPDGQKLLIATKTTPIYRHSYT-----AVHYIYPLKRNDKGV 132

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             N++     DG   +            P FSP+   +A+   ++     ++L+      
Sbjct: 133 TTNNIIERLSDGGPQQV-----------PVFSPDGTMIAFVRNNN-----IFLVKLLYGN 176

Query: 249 APKRIGNFR------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +  +I                          A  FS++          +  +  YS  + 
Sbjct: 177 SESQITEDGKQNSVINGIPDWVYEEEFGFDRALEFSADNTLIAFIRFDESEVPSYSFPVF 236

Query: 291 SNATERL 297
           +    R+
Sbjct: 237 AGQAPRI 243


>gi|256822005|ref|YP_003145968.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Kangiella koreensis DSM 16069]
 gi|256795544|gb|ACV26200.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kangiella koreensis DSM 16069]
          Length = 629

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 80/233 (34%), Gaps = 24/233 (10%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +  + V E   +  + N L V+       + +          PR SP+ +++ + +++ 
Sbjct: 133 MAYTVCVHERHEADEVINELIVISVTAPYTKQVIAQGYDFYSSPRISPDGKQLCWISWNH 192

Query: 234 EDIL----RVYLMDTR----IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            ++      ++L D      +    K  G     +  P +S +  +       D    IY
Sbjct: 193 PNMPWDETELWLADISESGVVSNQRKVAGGDNVSVYHPFWSVD-NKLYYVADSDGWWHIY 251

Query: 286 SVDLQSNATERLTNTLFINIS-ASY--------SPDSSQIVFESDREGKEQLYVMQSNGS 336
           S++  S    +L   L I      +          D  +++    ++G++ LY +     
Sbjct: 252 SLEHPSEPVHQL---LEIEFGLPQWVFGCRTVQWLDDKKLIAIGTKQGQQALYQINLENG 308

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVE 388
           D +  S   + + F+      GD + F   + +    +        +   L E
Sbjct: 309 DIELCS--GQWTAFNGQMVSDGDELYFMAANPQTGEAVYQFNFQSRKALQLTE 359



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 58/173 (33%), Gaps = 25/173 (14%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-----SPDSSQIVFESDRE 323
           G+  L +   D    +   +L +N+ E +T    +  S  Y     +P+ +  V   +R 
Sbjct: 86  GEWLLFA--DDTDQRLCLQNLVTNSVEFITPEPPVKRSLRYCDGEVAPNMAYTVCVHERH 143

Query: 324 GK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIG 374
                  +L V+       K++       Y  P  SP G  + +  ++          + 
Sbjct: 144 EADEVINELIVISVTAPYTKQVIAQGYDFYSSPRISPDGKQLCWISWNHPNMPWDETELW 203

Query: 375 VMKKDGSQE---RLLVEDSNL---QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +     S     +  V   +      P WS   + L +    DG     +YS+
Sbjct: 204 LADISESGVVSNQRKVAGGDNVSVYHPFWSVDNK-LYYVADSDG--WWHIYSL 253



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 53/166 (31%), Gaps = 28/166 (16%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQSNGS----DQKRISQDKEA 347
           +        S   SPD  Q+ + S           +L++   + S    +Q++++     
Sbjct: 166 IAQGYDFYSSPRISPDGKQLCWISWNHPNMPWDETELWLADISESGVVSNQRKVAGGDNV 225

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--------SNLQAPTWSP 399
           S + P WS   + + +   S   + I  ++        L+E            +   W  
Sbjct: 226 SVYHPFWSVD-NKLYYVADSDGWWHIYSLEHPSEPVHQLLEIEFGLPQWVFGCRTVQWLD 284

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
             + +    K+       LY I+L   +  L          QW  F
Sbjct: 285 DKKLIAIGTKQG---QQALYQINLENGDIEL-------CSGQWTAF 320


>gi|332290790|ref|YP_004429399.1| fibronectin, type III domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332168876|gb|AEE18131.1| fibronectin, type III domain-containing protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 504

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 62/166 (37%), Gaps = 21/166 (12%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G   + S    + ++  + D       +LT+    +     + +  +I F     G+ Q
Sbjct: 224 DGNSVVFSGANSDEVNE-TTDA---NVLQLTDESKNSFRPKRNNNVGKIAFLRTIGGENQ 279

Query: 328 LYVMQSNGSDQKRISQDKEASYFDP-----VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           ++ M   G+++++I+     + F        W+  G    +  F      +  +  DGS 
Sbjct: 280 IFTMSLAGANEQQITSTVPVAGFRQESIQFTWAENGQKFYYPNFD----KLYAINNDGSG 335

Query: 383 ERLLVED------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              + +       S++   +++P   ++I           ++++I 
Sbjct: 336 LSQIYQTNDGSLISDVAVSSFNPD--TIILKTNDVDGYNVRVFAIS 379



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 99/304 (32%), Gaps = 72/304 (23%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-----SRDQIL 214
           D+   S   ++ +   +I F+         +N +  M   GAN + +T         Q  
Sbjct: 251 DESKNSFRPKRNNNVGKIAFLRTIGG----ENQIFTMSLAGANEQQITSTVPVAGFRQES 306

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGK 270
            +  ++ N QK  Y  +D     ++Y ++       +        +++      F+ +  
Sbjct: 307 IQFTWAENGQKFYYPNFD-----KLYAINNDGSGLSQIYQTNDGSLISDVAVSSFNPD-T 360

Query: 271 RALISVQKDE-AMDIYSVDLQSNAT------ERLTNTLFINISASYSPDSSQIVFESDRE 323
             L +   D   + ++++   S          +L     I+++A+      ++++  D  
Sbjct: 361 IILKTNDVDGYNVRVFAISQSSGQLLYTVLENQLGAVSGIDVTANMD----KVLYARDVS 416

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ- 382
           G                              S  GD   FT      F   V  ++ S  
Sbjct: 417 G------------------------------SENGDYRIFTSR---IFEYNVNTQETSVV 443

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSI---DLNGRNETLINTPAYAS 438
           E  ++   N   P++SP    +I +R  +       +Y     D +  +E   N    A 
Sbjct: 444 ETEVIAGENDLFPSYSPDEGRIILTRVLNNQGAIPSIYLAFLNDSDDNDELFTN----AL 499

Query: 439 DPQW 442
            P W
Sbjct: 500 MPDW 503


>gi|315445303|ref|YP_004078182.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Mycobacterium
           sp. Spyr1]
 gi|315263606|gb|ADU00348.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Mycobacterium
           sp. Spyr1]
          Length = 626

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 81/238 (34%), Gaps = 16/238 (6%)

Query: 218 RFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-- 274
           + SP+  ++A+ A  ++   + V  +D+      +   +    +L   ++ + +  +   
Sbjct: 22  KISPDGTRMAFLAPSNNRLNVWVENLDSESGGLRRVTDDDNRSVLHFEWTDDPRWLIYLQ 81

Query: 275 SVQKDEAMDIYSVDLQSNATER--LTNTLFINISA-SYSPDSSQIVFESDREGKE-QLYV 330
               DE   ++ VDL         LT              +    V  ++R+     ++ 
Sbjct: 82  DTNGDENWHVHRVDLDDPEAPAVDLTPFPGAMALPVREVKNGRTTVMVNNRDATLLDIHE 141

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +     D   I+++          S  GDL A    +     +    +D    R ++   
Sbjct: 142 LDIATGDLTLIAKNPGHVNGWLS-SDDGDLFATALTADGDLELSRWDRDDEALRPIIRFD 200

Query: 391 NLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQ 441
               P        +P G  +     + G   ++L  +DL  G    + + P +  DP+
Sbjct: 201 GTDYPIGIHPLVLTPDGTGVWLGSNR-GTDRTRLVHVDLATGEETDVDSHPTFDVDPR 257



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQ--APTWS 398
                +      SP G  +AF   S  +  + V   D      R + +D N       W+
Sbjct: 12  FFNPPTRAAAKISPDGTRMAFLAPSNNRLNVWVENLDSESGGLRRVTDDDNRSVLHFEWT 71

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLN 424
              R LI+ +  +GD    ++ +DL+
Sbjct: 72  DDPRWLIYLQDTNGDENWHVHRVDLD 97



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 30/77 (38%), Gaps = 4/77 (5%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           A  SPD +++ F +    +  ++V   +      +R++ D   S     W+     + + 
Sbjct: 21  AKISPDGTRMAFLAPSNNRLNVWVENLDSESGGLRRVTDDDNRSVLHFEWTDDPRWLIYL 80

Query: 365 KFSGE--KFAIGVMKKD 379
           + +     + +  +  D
Sbjct: 81  QDTNGDENWHVHRVDLD 97



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 21/170 (12%), Positives = 52/170 (30%), Gaps = 9/170 (5%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           A + S +G R       +  ++++   +D +S    R+T+    ++    ++ D   +++
Sbjct: 20  AAKISPDGTRMAFLAPSNNRLNVWVENLDSESGGLRRVTDDDNRSVLHFEWTDDPRWLIY 79

Query: 319 ESDREG--KEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAI 373
             D  G     ++ +  +  +     ++    A          G               I
Sbjct: 80  LQDTNGDENWHVHRVDLDDPEAPAVDLTPFPGAMALPVREVKNGRTTVMVNNRDATLLDI 139

Query: 374 GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +        L+     ++     S  G     +   DGD     +  D
Sbjct: 140 HELDIATGDLTLIAKNPGHVNGWLSSDDGDLFATALTADGDLELSRWDRD 189


>gi|209522696|ref|ZP_03271254.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
 gi|209496745|gb|EDZ97042.1| serine/threonine protein kinase with WD40 repeats [Arthrospira
           maxima CS-328]
          Length = 825

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/287 (14%), Positives = 95/287 (33%), Gaps = 41/287 (14%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLW----DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
             +   +   E   +  V   L     DV   KQ     F    A+ + +A +    I  
Sbjct: 502 DCITAAQTFPESSPQYAVAQELLSQCQDVISWKQAKVNTFPIHTAAVQSVAVSPDGRIIA 561

Query: 165 SITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGAN-----------IRYLTPSRDQ 212
           S + +     +R+  + +  V+   + NS  ++  D +N            + +  + + 
Sbjct: 562 SGSRDN---TTRLWHIETGEVLQNFVGNSSAILSVDFSNDGLSLAAGTQLSQVIEWNLET 618

Query: 213 ILFEP-----------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           I + P           + SP+ + +A  + D      V + + R            +++ 
Sbjct: 619 IEWYPPLVGGSPIEAIQISPDNRAIATGSADG----NVRVWNRRTGLILYNNNQHSTIVY 674

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFES 320
           +  F+ NG+  +         +I+ +D Q +    R         S + +PD+ QI+   
Sbjct: 675 SVAFTPNGRWLV---TGSGDGNIHIIDWQIDQLRHRFPAHTGEVRSLAITPDALQII--- 728

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
                  + +     +++         +      SP G  IA +   
Sbjct: 729 SGGTDNNIKIWNLRTAEEVITLTGHRGAVLSVAVSPDGTQIASSSRD 775



 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 75/240 (31%), Gaps = 22/240 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   N+  +   +   +          +    FS +   +A        + +V   +  
Sbjct: 562 SGSRDNTTRLWHIETGEVLQNFVGNSSAILSVDFSNDGLSLA----AGTQLSQVIEWNLE 617

Query: 246 IDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TL 301
                P  +G     I A + S + +    +   D  + ++  + ++     L N     
Sbjct: 618 TIEWYPPLVGGSP--IEAIQISPDNRAIA-TGSADGNVRVW--NRRTGLI--LYNNNQHS 670

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I  S +++P+   +V  S   G   ++++       +               +P    I
Sbjct: 671 TIVYSVAFTPNGRWLVTGS---GDGNIHIIDWQIDQLRHRFPAHTGEVRSLAITPDALQI 727

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +  +     I  ++       L      + +   SP G  +  S +   D   K++++
Sbjct: 728 I-SGGTDNNIKIWNLRTAEEVITLTGHRGAVLSVAVSPDGTQIASSSR---DRTVKIWNL 783



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 57/173 (32%), Gaps = 20/173 (11%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDF------NSRILFVSESVVSGIIKNSLCVMDRDGANI 203
             R IA   +D   +      G        +S I++      +G     L     DG NI
Sbjct: 639 DNRAIATGSADGNVRVWNRRTGLILYNNNQHSTIVYSVAFTPNGRW---LVTGSGDG-NI 694

Query: 204 RYLTPSRDQI-LFEPRFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFR 257
             +    DQ+    P  +   + +A                + + + R       +   R
Sbjct: 695 HIIDWQIDQLRHRFPAHTGEVRSLAITPDALQIISGGTDNNIKIWNLRTAEEVITLTGHR 754

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASY 309
             +L+   S +G +   S  +D  + I+  +L++      LTN   +  S  +
Sbjct: 755 GAVLSVAVSPDGTQIA-SSSRDRTVKIW--NLKTGELLNTLTNPQAVVNSLVF 804



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 62/183 (33%), Gaps = 44/183 (24%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDS 313
             + + +   S +G+    S  +D    ++   +++    +  + N+  I +S  +S D 
Sbjct: 544 HTAAVQSVAVSPDGRIIA-SGSRDNTTRLW--HIETGEVLQNFVGNSSAI-LSVDFSNDG 599

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP---QGDLIAFTKFSGEK 370
             +                       ++SQ  E +     W P    G  I   + S + 
Sbjct: 600 LSLA-------------------AGTQLSQVIEWNLETIEWYPPLVGGSPIEAIQISPDN 640

Query: 371 FAIGVMKKDGSQER-------LLVEDSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            AI     DG+          +L  ++       +  ++P+GR L+      G     ++
Sbjct: 641 RAIATGSADGNVRVWNRRTGLILYNNNQHSTIVYSVAFTPNGRWLV-----TGSGDGNIH 695

Query: 420 SID 422
            ID
Sbjct: 696 IID 698


>gi|114561718|ref|YP_749231.1| peptidase S9B dipeptidylpeptidase IV subunit [Shewanella
           frigidimarina NCIMB 400]
 gi|114333011|gb|ABI70393.1| dipeptidyl-peptidase IV. Serine peptidase. MEROPS family S09B
           [Shewanella frigidimarina NCIMB 400]
          Length = 767

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 57/189 (30%), Gaps = 54/189 (28%)

Query: 264 RFSSNGKRALISVQKDEA---MDIYSVDLQSNA-----------------------TERL 297
             S NGKR      + +     D++ +D+ +                           + 
Sbjct: 74  ALSPNGKRVTYLSNRADNQHLYDLWQMDIATGKRSILINADQLEAGELSDEEKARRERQR 133

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                I +   +S DS  I+  +      +LY+     +    ++   +    D   SP+
Sbjct: 134 IYGQGI-MEYFWSEDSQHILIPA----AGKLYLYDVASNKVAELAT-GDGFATDGRLSPK 187

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQAPTWSP 399
           G  ++F +       + V+  D  +   L  D                    +    W+P
Sbjct: 188 GHFVSFVRDQ----NLFVLSLDSQKVTALTTDGKGPIKNAMAEFVAQEEMDRMTGYWWAP 243

Query: 400 SGRSLIFSR 408
              ++ F+R
Sbjct: 244 DESAIAFTR 252



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/214 (16%), Positives = 66/214 (30%), Gaps = 51/214 (23%)

Query: 218 RFSPNQQKVAYATY--DDEDILRVYLMDTRID-----------------------RAPKR 252
             SPN ++V Y +   D++ +  ++ MD                           R  +R
Sbjct: 74  ALSPNGKRVTYLSNRADNQHLYDLWQMDIATGKRSILINADQLEAGELSDEEKARRERQR 133

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I     M     +S + +  LI      A  +Y  D+ SN    L            SP 
Sbjct: 134 IYGQGIMEYF--WSEDSQHILI----PAAGKLYLYDVASNKVAELATGDGFATDGRLSPK 187

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSP 356
              + F  D    + L+V+  +      ++ D +    + +                W+P
Sbjct: 188 GHFVSFVRD----QNLFVLSLDSQKVTALTTDGKGPIKNAMAEFVAQEEMDRMTGYWWAP 243

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
               IAFT+       +    +  ++   L E  
Sbjct: 244 DESAIAFTRIDESGVELVTRNEIYAEGIKLTEQR 277



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 58/154 (37%), Gaps = 13/154 (8%)

Query: 203 IRYLTPSRDQILFEPR--FSPNQQKVAYATYDDED------ILRVYLMDTRIDRAPKRIG 254
           I ++   + + ++ PR  + P+ Q V++     +       I  +           +R  
Sbjct: 300 ISWIDLGKQKDMYLPRVDWLPDSQHVSFQWQSRDQQTLDLRIAAISQPTQAKTVIEERSK 359

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            + ++     F       +   ++D    +Y  DLQ    ++LT   +   +  +  +++
Sbjct: 360 AWVNLNNDLHFLKQQAALIWGSERDGFNHLYLFDLQGKQLKQLTQGDWAVDTLEFVDEAT 419

Query: 315 QIVFESDREGK---EQLYVMQSNGS--DQKRISQ 343
             V+ S R+       LY +  N      +RISQ
Sbjct: 420 GWVYFSGRKDSVVERHLYRVNLNKGMDSIERISQ 453



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 57/182 (31%), Gaps = 46/182 (25%)

Query: 292 NATERLTNTLFINISASY----------SPDSSQIVFESDREGKEQLY------------ 329
            +T  LT    I+ S +           SP+  ++ + S+R   + LY            
Sbjct: 49  GSTTPLTIER-IHASPAVAGSSPRGLALSPNGKRVTYLSNRADNQHLYDLWQMDIATGKR 107

Query: 330 --VMQSNGSDQKRISQDKEASYFDPV----------WSPQGDLIAFTKFSGEKFAIGVMK 377
             ++ ++  +   +S +++A                WS     I           + +  
Sbjct: 108 SILINADQLEAGELSDEEKARRERQRIYGQGIMEYFWSEDSQHILI----PAAGKLYLYD 163

Query: 378 KDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
              ++   L   D        SP G  + F R ++      L+ + L+ +  T + T   
Sbjct: 164 VASNKVAELATGDGFATDGRLSPKGHFVSFVRDQN------LFVLSLDSQKVTALTTDGK 217

Query: 437 AS 438
             
Sbjct: 218 GP 219


>gi|46126003|ref|XP_387555.1| PWP2_NEUCR Periodic tryptophan protein 2 homolog [Gibberella zeae
           PH-1]
          Length = 893

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 87/223 (39%), Gaps = 20/223 (8%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +A+       +L V+   +      K+ G+F +M     +S +G+R  I+   D  
Sbjct: 312 SGEWLAFGASKLGQLL-VWEWQSE-SYILKQQGHFDAMNSL-VYSPDGQRI-ITCADDGK 367

Query: 282 MDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + ++  D+QS       T       +  ++   + ++F S  +G  + + +     + + 
Sbjct: 368 IKVW--DIQSGFCIVTFTEHTSGVTACEFAKKGN-VLFTSSLDGSIRAWDL-IRYRNFRT 423

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
            +     S+      P G+++A        F I +        +LL + S  + P     
Sbjct: 424 FTAPTRLSFSCMAVDPSGEVVAAGSLD--SFDIHIWSVQTG--QLLDQLSGHEGPVSSLA 479

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           ++P+G SLI       D  ++++SI    +    +   A   D
Sbjct: 480 FTPNGNSLISGSW---DRTARIWSIFSRTQTSEPLQLQADVLD 519



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 74/261 (28%), Gaps = 26/261 (9%)

Query: 154 IAHTIS---DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           + H +S   +DI      + G++                   L V +    +        
Sbjct: 293 MIHKLSISQNDIDFVTINKSGEWL---------AFGASKLGQLLVWEWQSESYILKQQGH 343

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
              +    +SP+ Q++     D +    + + D +            S + A  F+  G 
Sbjct: 344 FDAMNSLVYSPDGQRIITCADDGK----IKVWDIQSGFCIVTFTEHTSGVTACEFAKKGN 399

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLY 329
             L +   D ++  + + ++       T    ++ S  +  P    +   S       ++
Sbjct: 400 -VLFTSSLDGSIRAWDL-IRYRNFRTFTAPTRLSFSCMAVDPSGEVVAAGSLDS--FDIH 455

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLLV 387
           +               E       ++P G+ +    +      I  +  +   S+   L 
Sbjct: 456 IWSVQTGQLLDQLSGHEGPVSSLAFTPNGNSLISGSWD-RTARIWSIFSRTQTSEPLQLQ 514

Query: 388 EDSNLQAPTWSPSGRSLIFSR 408
            D    A    P    L  S 
Sbjct: 515 ADVLDIAVR--PDSLQLAIST 533


>gi|324510909|gb|ADY44556.1| Notchless protein 1 [Ascaris suum]
          Length = 479

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 63/188 (33%), Gaps = 10/188 (5%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P   + +   +FSP+ + +A  + D      V   D   +   +      S +L   +S
Sbjct: 108 LPGHGEPVISIQFSPDGRGLASGSGD----CTVRFWDVDTELPLRTCKAHTSWVLCIAWS 163

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FESDREG 324
            + K+   S  K+  + +++    +   ++LT         ++ P     +  F +    
Sbjct: 164 PDAKKLA-SACKNGHICLWNAHTGAQIGKKLTGHKQWINQLAWQPFHQDPISRFLASAGK 222

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +  +      R      AS     W   G+ + ++        +   + DG   R
Sbjct: 223 DGMIRIWDTVNYTVVRALSGHTASVTSIRW--GGEGLIYSGSQDRMVKVWRAE-DGVLCR 279

Query: 385 LLVEDSNL 392
            L   ++ 
Sbjct: 280 TLSGHAHW 287



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 50/151 (33%), Gaps = 7/151 (4%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             L+S   D  + ++    +     R+T    +     +SPD+  I   S     + + +
Sbjct: 336 EILVSGSDDFTLYLWRPTTEKKPVARMTGHQQLINQVVFSPDARYIASASF---DKSIKL 392

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                       +    + +   WS    L+  +  +     +  M+K G  E L     
Sbjct: 393 WCGRTGAFIDTLRGHVQAVYQIAWSADSRLLV-SGSADSTLKVWDMRKRGICEDLPGHGD 451

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + A  WSP G  +        D   KL+ +
Sbjct: 452 EVYAVDWSPDGERVA---SGGKDKVLKLWRL 479



 Score = 36.9 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 75/213 (35%), Gaps = 33/213 (15%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVK 134
           R+  F+  +Q     +I     I + +   + GA     G ++  G D   +   LW   
Sbjct: 300 RTSCFDPKNQCIAPDQIEECRKIAQLRYEKAKGAS----GEILVSGSDDFTL--YLWRPT 353

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
             K+ +           R   H       Q +  +   F+    +++ +     IK  L 
Sbjct: 354 TEKKPVA----------RMTGH-------QQLINQV-VFSPDARYIASASFDKSIK--LW 393

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
              R GA          Q +++  +S + + +   + D      + + D R     + + 
Sbjct: 394 -CGRTGA-FIDTLRGHVQAVYQIAWSADSRLLVSGSADS----TLKVWDMRKRGICEDLP 447

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
                + A  +S +G+R   S  KD+ + ++ +
Sbjct: 448 GHGDEVYAVDWSPDGERVA-SGGKDKVLKLWRL 479


>gi|307106030|gb|EFN54277.1| hypothetical protein CHLNCDRAFT_24755 [Chlorella variabilis]
          Length = 505

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 61/158 (38%), Gaps = 11/158 (6%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIY-------SVDLQSNATERLTNTLFINISA 307
             +S      FS +G + L++   D  ++++        +DL   A E+        ++A
Sbjct: 203 GVKSHAECAAFSPDG-QLLVTGSVDGFVEVWDHLTGRLKLDLPYQAEEQFMLHDSAVLAA 261

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++S DS  +    D++G+ +++ +++ G   +R             +S  G  +    + 
Sbjct: 262 AFSRDSELLA-TGDQDGRVKVWRVRT-GQCLRRFDSAHSQGVTSLAFSRDGTHVLSASYD 319

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                +  +K     +      S + A  +S  G  ++
Sbjct: 320 -TLVRVHGIKSGRMLKEFRGHSSFVNAAVYSADGTQVV 356


>gi|218131638|ref|ZP_03460442.1| hypothetical protein BACEGG_03258 [Bacteroides eggerthii DSM 20697]
 gi|217985941|gb|EEC52280.1| hypothetical protein BACEGG_03258 [Bacteroides eggerthii DSM 20697]
          Length = 731

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 74/183 (40%), Gaps = 17/183 (9%)

Query: 264 RFSSNGKRA-LISVQKDEA-MDIYSVDLQSNAT-ERL---TNTLFINISAS----YSP-D 312
            ++ +GK   LI + +++    +   D ++      L   T+T +  +       + P D
Sbjct: 288 SWAPDGKSLYLIELNREQNHAKLCRYDSKTGELMSTLMEETHTKY--VEPQHPILFLPWD 345

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEK 370
            +  +++S R+G   LY+  ++G   +++++ +        ++ +   +  T    S  +
Sbjct: 346 HTMFIYQSQRDGYNHLYLYNTDGKLIRQLTRGEWLVQKILGFNAKKREVIITSTEVSPLQ 405

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNET 429
             +  +  +  +   L     +     S SG  +I  R    D   ++  I   NG+N +
Sbjct: 406 SNLYKVNVNTGKCTPLDNGKGIHEGILSASGSYII-DRYSTPDIPRQIDIITTQNGKNVS 464

Query: 430 LIN 432
           L+ 
Sbjct: 465 LLT 467


>gi|186681051|ref|YP_001864247.1| hypothetical protein Npun_F0541 [Nostoc punctiforme PCC 73102]
 gi|186463503|gb|ACC79304.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 587

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 97/302 (32%), Gaps = 38/302 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G+ +       R E +LWD+   + I       + + +  +   + D++        G  
Sbjct: 300 GKALPILASGSRGETKLWDLSKGELI------DTLSEYPWVIPGLVDEVNSLAFSADG-- 351

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                   +++VS    +++ +      ++  +    + ++    F+P+ + +A      
Sbjct: 352 --------QTLVSCGADSTIKLWHVGALDLIDILHKHNGVVRCAAFTPDGRMLA----TG 399

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN- 292
            D  ++   D    +    +    +   +   S +G+  +    +   + ++    Q+  
Sbjct: 400 GDDRKILFWDLMHRQVAIAVSLDDTAAHSLVLSRDGETLVTGSYR--KIKVWRTLPQTGI 457

Query: 293 -------ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
                      L     I  S + S D+  +V  S     + + + Q    +     +  
Sbjct: 458 KSLKDAQPLHTLMGHSHIVRSLAISADAKLLVSGS---WDQTIKIWQLETGELLHTLKGH 514

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRS 403
               +    SP G +IA          I +      +         + + A  ++ SG  
Sbjct: 515 RDRVYAIALSPDGQIIASGSADKT---IKLWHLQTGELLGTFTGHGNIVTALAFTASGEM 571

Query: 404 LI 405
           L+
Sbjct: 572 LV 573


>gi|21226507|ref|NP_632429.1| putative surface layer protein [Methanosarcina mazei Go1]
 gi|20904775|gb|AAM30101.1| putative surface layer protein [Methanosarcina mazei Go1]
          Length = 477

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 94/276 (34%), Gaps = 25/276 (9%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           GD+N R  +   +    +   ++ V+D    N+    P           +P   K+ Y  
Sbjct: 45  GDYNQRGYYYDMNYNGTVPTPTVAVIDTATNNVTARVPLGGGWPVGIVVNPAGTKL-YVA 103

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               D+  VY++DT  +    ++    S       +  G R  +  Q+D   DI  ++  
Sbjct: 104 SAAIDVCTVYVIDTAANTVSAKVNIGSSYPSGITVNPAGTRVYVPKQRD-NTDISVINTA 162

Query: 291 SNAT------ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +N        E+ T+ + I      +PD  +I   + R       V+ +  +     +  
Sbjct: 163 TNTLMAPIIVEQSTHNVAI------TPDGKKIYVTNFRG--NITSVIDAATNKVTGSASV 214

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRS 403
            ++       +P G  +  T ++     + V+          V   S       +  G  
Sbjct: 215 GDSPC-GIAVTPDGKKVYITNYNSST--VSVINTATDNVITTVSVGSLPDRVAVTSDGNK 271

Query: 404 LIFS-----RKKDGDTGSKLYSIDLNGRNETLINTP 434
           +  +        D  T + + ++ +   +  ++ +P
Sbjct: 272 VYVAGSSTVSVIDTATDTVIATVPVGTSSREIVISP 307


>gi|326493952|dbj|BAJ85438.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326524604|dbj|BAK00685.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 475

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 64/158 (40%), Gaps = 19/158 (12%)

Query: 182 ESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    ++ + +       +       +++    FSP+ Q +A A++D        
Sbjct: 332 ERLVSGSDDFTMFLWEPTISKQPKARMTGHQKVVNHVYFSPDGQWLASASFDKS------ 385

Query: 241 LMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATER- 296
            +        K +  FR  +       +S++  R L+S  KD  + ++  D+++   ++ 
Sbjct: 386 -VKLWNGITGKFVTAFRGHVADVYQISWSAD-SRLLLSGSKDSTLKVW--DIRARKLKQD 441

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           L        +  +SPD  ++V      GK++   +  N
Sbjct: 442 LPGHADEVYAVDWSPDGEKVV----SGGKDRALKLWMN 475



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/302 (13%), Positives = 83/302 (27%), Gaps = 57/302 (18%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D +     Y        +    +SP+ + +   +   +    +      
Sbjct: 127 SGSGDTTVRFWDLNTQTPLYTCKGHKNWVLCIAWSPDGKHLVSGS---KSGELILWDPKT 183

Query: 246 IDRAPKRIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNA-TERLT 298
            ++    +   R  I A  +      S    R  +S  KD    I+  D+ +      LT
Sbjct: 184 GNQLGTPLTGHRKWITAVSWEPVHLQSP--SRRFVSASKDGDARIW--DITTKKCVISLT 239

Query: 299 NTLFINISASYSPDSSQIVFESDRE------------------GKEQLYVMQSNGSDQKR 340
                     +  D   +++    +                  G    +V     S +  
Sbjct: 240 GHTNAVTCVKWGGDG--LIYTGSEDCLIKVWETTQGKLVKTLQGHGH-WVNSLALSTEYV 296

Query: 341 ISQDKEASYFDPVWSPQGDLIA----FTKFSGE----------KFAIGVMKKDGSQE--- 383
           +             SP+    A    + K  G            F + + +   S++   
Sbjct: 297 LRTGAYDHTRKTYSSPEEMKEAALARYEKMRGNAPERLVSGSDDFTMFLWEPTISKQPKA 356

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASDPQW 442
           R+      +    +SP G+ L        D   KL++  + G+  T      A      W
Sbjct: 357 RMTGHQKVVNHVYFSPDGQWLA---SASFDKSVKLWN-GITGKFVTAFRGHVADVYQISW 412

Query: 443 VG 444
             
Sbjct: 413 SA 414



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 45/127 (35%), Gaps = 13/127 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + +    FSP+   +A  + D      V   D             ++ +L   +S +
Sbjct: 108 GHTEAVLTVSFSPDGTCLASGSGDT----TVRFWDLNTQTPLYTCKGHKNWVLCIAWSPD 163

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP----DSSQIVFESDR 322
           GK  + S  K   + ++  D ++       LT       + S+ P      S+    + +
Sbjct: 164 GKHLV-SGSKSGELILW--DPKTGNQLGTPLTGHRKWITAVSWEPVHLQSPSRRFVSASK 220

Query: 323 EGKEQLY 329
           +G  +++
Sbjct: 221 DGDARIW 227



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/150 (14%), Positives = 44/150 (29%), Gaps = 11/150 (7%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++   +      R+T    +     +SPD   +   S     + + +  
Sbjct: 334 LVSGSDDFTMFLWEPTISKQPKARMTGHQKVVNHVYFSPDGQWLASASF---DKSVKLWN 390

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +   A  +   WS    L+           + V      + +  +     
Sbjct: 391 GITGKFVTAFRGHVADVYQISWSADSRLLLSGSKDST---LKVWDIRARKLKQDLPGHAD 447

Query: 393 QAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
           +     WSP G  ++       D   KL+ 
Sbjct: 448 EVYAVDWSPDGEKVV---SGGKDRALKLWM 474



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 19/125 (15%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SPD + +   S   G   +     N        +  +       WSP G  +     S
Sbjct: 117 SFSPDGTCLASGS---GDTTVRFWDLNTQTPLYTCKGHKNWVLCIAWSPDGKHLVSGSKS 173

Query: 368 GEKFAIGVMKKDGS---QERLLVEDSNLQAPTW------SPSGRSLIFSRKKDGDTGSKL 418
           G    + +            L      + A +W      SPS R +  S  KDGD  +++
Sbjct: 174 G---ELILWDPKTGNQLGTPLTGHRKWITAVSWEPVHLQSPSRRFV--SASKDGD--ARI 226

Query: 419 YSIDL 423
           + I  
Sbjct: 227 WDITT 231


>gi|229032511|ref|ZP_04188478.1| hypothetical protein bcere0028_45500 [Bacillus cereus AH1271]
 gi|228728802|gb|EEL79811.1| hypothetical protein bcere0028_45500 [Bacillus cereus AH1271]
          Length = 409

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/234 (13%), Positives = 80/234 (34%), Gaps = 34/234 (14%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRIGNFRSMI 260
           + +  ++++ ++ P++S + + + Y   D+   +  L +Y    +I+  P      R + 
Sbjct: 44  QEIQITKNRYVYSPKWSYDGRFIGYIDSDETGKKSNLFIYDTKEKINYQP----YVRVVT 99

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
              ++S N  +   +    +   +    +++   +   N         + P+  + +  S
Sbjct: 100 SDFKWSPNKNQLAYT----DQGLLNVTKIKNGRPQGFENVSLGVSDFEWFPNGKEFIVSS 155

Query: 321 DR------EGKEQLYVMQSNG-----------SDQKRISQDKEASYFDPVWSPQGDLIAF 363
                    GK  LY++  +            + Q   +     +     WS  G  I+F
Sbjct: 156 QSCLRPTGWGKVPLYIIPVDANLAKDKIRPFYTIQTNETDLFAITANYFKWSSDGKWISF 215

Query: 364 -----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKD 411
                   + +   + V+   G   R +      +    W+PS   L +   + 
Sbjct: 216 LASPTASLAMDSNTLCVISSQGKHFRTIGNMLWFKDWMKWAPSANQLAYISGEG 269



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 48/313 (15%), Positives = 108/313 (34%), Gaps = 55/313 (17%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            + +   K  ++ R +   +S  +G   N   +   D        P    +  + ++SPN
Sbjct: 51  NRYVYSPKWSYDGRFIGYIDSDETGKKSN---LFIYDTKEKINYQPYVRVVTSDFKWSPN 107

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----- 277
           + ++AY      ++ ++       +  P+   N    +    +  NGK  ++S Q     
Sbjct: 108 KNQLAYTDQGLLNVTKIK------NGRPQGFENVSLGVSDFEWFPNGKEFIVSSQSCLRP 161

Query: 278 -KDEAMDIYSVDLQSNATE-RLTNTLFINISAS-----------YSPDSSQIVF-----E 319
                + +Y + + +N  + ++     I  + +           +S D   I F      
Sbjct: 162 TGWGKVPLYIIPVDANLAKDKIRPFYTIQTNETDLFAITANYFKWSSDGKWISFLASPTA 221

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKF----AI 373
           S       L V+ S G   + I       +F     W+P  + +A+    G  F      
Sbjct: 222 SLAMDSNTLCVISSQGKHFRTI---GNMLWFKDWMKWAPSANQLAYISGEGRFFVENKKF 278

Query: 374 GVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSK---------LYSI 421
            V     ++++ +       +L    +SP+   ++ +R  +     +         LY I
Sbjct: 279 TVADMVTAKQQKVYTPVGYVDLDLEWFSPN--KVVVARATENKAWKEGPVPTMFTTLYMI 336

Query: 422 DLNGRNETLINTP 434
           ++    +  I+ P
Sbjct: 337 NIKTEEQKQISFP 349



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 29/76 (38%), Gaps = 2/76 (2%)

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               + +  K G+QE  + ++  + +P WS  GR + +    +    S L+  D   +  
Sbjct: 33  RDHRLWI--KKGNQEIQITKNRYVYSPKWSYDGRFIGYIDSDETGKKSNLFIYDTKEKIN 90

Query: 429 TLINTPAYASDPQWVG 444
                    SD +W  
Sbjct: 91  YQPYVRVVTSDFKWSP 106


>gi|163788754|ref|ZP_02183199.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteriales bacterium ALC-1]
 gi|159875991|gb|EDP70050.1| outer membrane protein, peptidoglycan-associated lipoprotein
           [Flavobacteriales bacterium ALC-1]
          Length = 636

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 51/315 (16%), Positives = 101/315 (32%), Gaps = 58/315 (18%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG---ANIRYL-TPSRDQILFE 216
           DIY  +T +     +       S  S         +        N + + + +++  L  
Sbjct: 131 DIYSKLTTKSDIIVTIENLPFNSENSDFGSYVFNDILYYASAKENEKKVYSWNKEPFLDL 190

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            + S  +   ++ +YD    ++   ++T    A   I N            +GK    + 
Sbjct: 191 FQISITENNDSF-SYDSPSEIKGENVNTDYHEASIAITN------------DGKTLYFTR 237

Query: 277 QKDEAMDIYSVDLQSNATER-----LTNTLFINIS-------------ASYSPDSSQIVF 318
                 +    D +     +     L N  + N+               + SPD+  + F
Sbjct: 238 DNINKRNRLQYDKEGTTHLKIYKAELVNGQWTNVEELPFNDDVFSTGHPALSPDNKTLYF 297

Query: 319 ESDREGK---EQLYVMQSNGSDQKRISQ------DKEASYFDPVWSPQGDLIAFTKFSG- 368
            SDREG      +Y +  N  D     +      + E     P  S    L  +    G 
Sbjct: 298 VSDREGGIGQTDIYSVDINNGDTYGEPKNLGEKINTEGREMFPFVSNDNTL--YFSSDGY 355

Query: 369 ------EKFAIGVMKKDGSQERLLVEDSNLQAPTWS----PSGRSLIFSRKK-DGDTGSK 417
                 + F   ++K+D S+ + L    N     ++     + +   FS  + +G  G  
Sbjct: 356 LNLGLLDIFKSNILKEDRSEPKNLGAPYNSGYDDFAFYVDSTSQKGYFSSNRPNGKGGDD 415

Query: 418 LYSIDLNGRNETLIN 432
           +YS +     +T+  
Sbjct: 416 IYSFNTTQCKQTITG 430


>gi|74143753|dbj|BAE41208.1| unnamed protein product [Mus musculus]
          Length = 546

 Score = 51.6 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 71/198 (35%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  D  D +RVY  ++ I   P      +  + A  +       L    
Sbjct: 158 AWHPHTNKFAVALLD--DSIRVYNANSTI--VPSLKHRLQRNVAALAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P+   ++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPNGGWLLSASPVD--AVIL 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  +  T  S   F +   +    +       
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVLATTPS-AVFRVWEAQMWTCEAW-PTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGNRLLFT 346


>gi|296124144|ref|YP_003631922.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Planctomyces limnophilus DSM 3776]
 gi|296016484|gb|ADG69723.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Planctomyces limnophilus DSM 3776]
          Length = 701

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 76/218 (34%), Gaps = 19/218 (8%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV--MDRDGANIRYL---TPSRDQILF 215
           D+ Q      GD +   +        G     L V  ++ DG  + +L   +PS    L 
Sbjct: 175 DVRQRSVLVPGDSSYPGVEKHRFARVGGPIEQLRVGVVNADGQQLVWLPIESPSEGIYLG 234

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--------IGNFRSMILAPRFSS 267
           +  ++ N Q++    +      R +L+ T  ++            + + +       +  
Sbjct: 235 QVEWAGNSQEILVEKFSRFRDQREFLLATTTEQIKTIFSESNEAWVESSQGKNSGLVWIQ 294

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--INISASYSPDSSQIVFESDREGK 325
            G+  ++  +KD     Y      N    LT+  +  I+  A      +   F +  +  
Sbjct: 295 EGQAFVVITEKDGWRHAYRCSRDGNEVTLLTSGNYDLIDR-AVIDEKRNWYYFYASPDDA 353

Query: 326 EQ--LYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDL 360
            Q  LY +  +GS Q +R++   +       +SP    
Sbjct: 354 TQKYLYRVPLDGSGQLQRMTPPDQIGTHSYQFSPDATW 391



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 92/289 (31%), Gaps = 32/289 (11%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-----DGANIRYLT-----PSRDQILFE 216
                  + ++       +S    + L V D+     + AN + +      P R     +
Sbjct: 97  QKRAWPSDEKMPAPESERLSPAGTHRLVVRDKKLLSINQANQQEILLAAPAPDRFVAYRD 156

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-------KRIGNFRSMILAPRFSSNG 269
           P +SP+  +V +   D  D+ +  ++       P        R+G     +     +++G
Sbjct: 157 PVWSPDGSRVLFIEADFTDVRQRSVLVPGDSSYPGVEKHRFARVGGPIEQLRVGVVNADG 216

Query: 270 KRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           ++ +        E + +  V+   N+ E L           +S    Q  F       EQ
Sbjct: 217 QQLVWLPIESPSEGIYLGQVEWAGNSQEILVE--------KFSRFRDQREFL-LATTTEQ 267

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +  + S  ++    S   + S    VW  +G                   +DG++  LL 
Sbjct: 268 IKTIFSESNEAWVESSQGKNS--GLVWIQEGQAFVVITEKDGWRHAYRCSRDGNEVTLLT 325

Query: 388 EDSNLQAPTWSPSGR--SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +           +     F    D  T   LY + L+G  +    TP
Sbjct: 326 SGNYDLIDRAVIDEKRNWYYFYASPDDATQKYLYRVPLDGSGQLQRMTP 374


>gi|196233302|ref|ZP_03132147.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
 gi|196222607|gb|EDY17132.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
          Length = 933

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/230 (12%), Positives = 67/230 (29%), Gaps = 24/230 (10%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  + + + D      + P  +  L    FS N Q +           +V L D +   
Sbjct: 179 GQKQVLLYNTDTLQPLGVLPFPEGFLDVLHFSRNGQVLMAGGGMGGKSGKVALWDLKTGE 238

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINIS 306
               IGN     LA   S + +   +       + +  +         + +        +
Sbjct: 239 RIATIGNEFDQALAADLSPDQQFVAL----GGPLKLLKIYSTKDGKLVQSIKKHTDWVTA 294

Query: 307 ASYSPDSSQIVFESDREGKEQLYV------MQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            ++S D   +   +DR G  Q++         +    +  ++               G +
Sbjct: 295 IAFSADGKYLA-SADRAGGIQIWESGTWKEFNTLPGHKGMVTGLAFMPGVLASCGEDGKV 353

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
             +    G++         G           ++   ++P G+ +   R K
Sbjct: 354 TLWDAKEGKEIKSWTAHAGG-----------VEWVDFTPDGKLISCGRDK 392


>gi|195546936|ref|NP_001124309.1| WD repeat domain 1 [Canis lupus familiaris]
 gi|171770454|gb|ACB55038.1| WD repeat domain 1 [Canis lupus familiaris]
          Length = 606

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 72/244 (29%), Gaps = 55/244 (22%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   +++P+   +A  + D    LR++    +          F   I    +
Sbjct: 53  IYTEHAHQVVVAKYAPSGFYIA--SGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAW 110

Query: 266 SSNGKRALISVQK--------------------DEAMDIYSVDLQSNATERLTNTLFINI 305
           + + KR  +  +                          I SVD++ +   RL      N 
Sbjct: 111 TEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNC 170

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A +             EG    +              D         +SP G+  A   
Sbjct: 171 AAFF-------------EGPPFKFKFTIG---------DHNRFVNCVRFSPDGNRFATAS 208

Query: 366 FSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G    I +      ++          D  + A +WSP    L+      GD  SK++ 
Sbjct: 209 ADG---QIYIYDGKTGEKVCALGGDKAHDGGIYAISWSPDSTHLL---SASGDKTSKIWD 262

Query: 421 IDLN 424
           +++N
Sbjct: 263 VNVN 266



 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 65/215 (30%), Gaps = 36/215 (16%)

Query: 108 AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA-------- 155
           A  +V  +    G       +  + R+WD   ++ ++  ++       + IA        
Sbjct: 58  AHQVVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRI 117

Query: 156 -------HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-------GA 201
                                 G+       ++   +       L     D       G 
Sbjct: 118 AVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGP 177

Query: 202 NIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---F 256
             ++     D   F    RFSP+  + A A+ D     ++Y+ D +       +G     
Sbjct: 178 PFKFKFTIGDHNRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGDKAH 233

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              I A  +S +    L S   D+   I+ V++ S
Sbjct: 234 DGGIYAISWSPDSTHLL-SASGDKTSKIWDVNVNS 267


>gi|158421911|ref|YP_001523203.1| WD-40 repeat-containing protein [Azorhizobium caulinodans ORS 571]
 gi|158328800|dbj|BAF86285.1| WD-40 repeat G-protein beta [Azorhizobium caulinodans ORS 571]
          Length = 331

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/278 (16%), Positives = 92/278 (33%), Gaps = 25/278 (8%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           GK+  S     R +  +   ++ Q     KG +  R+    +  V+     +  V+   G
Sbjct: 65  GKRLVSGGDDGRVVELSAEGEV-QVRAEHKGRWIDRVALGPDGAVAYSAGKTAYVLPAKG 123

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                   S    L    F+P   ++A A Y    +    L+D + D     +  ++   
Sbjct: 124 EARSLEVASTVGGL---SFAPKGLRLAVAHYGGVTLWYPNLVDAKPD-----LFGWKGSH 175

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           L   FS +G+  + ++Q + A+  + V        R+T       S ++S D   +    
Sbjct: 176 LGVAFSPDGRFLVTTMQ-EAALHGWRVS-DGGHM-RMTGYPARVKSFNFSADGKWLA--- 229

Query: 321 DREGKEQLYVMQSN------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              G  ++ +          G     I+    A        P  D +    +      + 
Sbjct: 230 -TSGSSEVILWPFASKEGPMGKQPSMIAPSSTARVSSVACHP-KDPVVAVGYEDGMVLMA 287

Query: 375 VMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKD 411
            +  DG++  L   D +    T W   G ++ F     
Sbjct: 288 RIS-DGAEILLRAPDGSPVTATGWRADGGAVAFGTANG 324


>gi|119952618|ref|YP_950185.1| hypothetical protein AAur_pTC20019 [Arthrobacter aurescens TC1]
 gi|119951748|gb|ABM10657.1| conserved hypothetical protein [Arthrobacter aurescens TC1]
          Length = 348

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 58/153 (37%), Gaps = 17/153 (11%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            D+ ++   F+P +  V YAT       R++L+   I  A + +      +  P  S +G
Sbjct: 203 SDRNIWGVTFAPGRSDVFYATAASSG--RIWLVQGSI--AARTLTAIHDNVECPSVSPDG 258

Query: 270 KRALISVQKDE----AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--E 323
            R               ++  +DL +     L+    ++    +  D + +   +D   E
Sbjct: 259 TRIAYKKNVGGPLTAHWNVALIDLATGTETVLSEKRSVDDQIEWLDDQTLLYGLADETTE 318

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           G   ++ + ++ + Q  +       + +  WSP
Sbjct: 319 GDSNIWKLPTDPASQPSL-------FIEHAWSP 344



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 50/159 (31%), Gaps = 21/159 (13%)

Query: 301 LFINISASYSPDSSQIV---FESDRE----GKEQLYVMQSNGSDQKRI-----------S 342
             I   A  S D S I    F S       G      +   G     +            
Sbjct: 141 PGIPSRARTSADGSLIATTVFVSGHSYTQAGFSTATEITLPGGSPGNLEDFSLIVNGERL 200

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
              + + +   ++P G    F   +     I +++   +   L     N++ P+ SP G 
Sbjct: 201 LASDRNIWGVTFAP-GRSDVFYATAASSGRIWLVQGSIAARTLTAIHDNVECPSVSPDGT 259

Query: 403 SLIFSRKKDGDTGS--KLYSIDLNGRNETLINTPAYASD 439
            + + +   G   +   +  IDL    ET+++      D
Sbjct: 260 RIAYKKNVGGPLTAHWNVALIDLATGTETVLSEKRSVDD 298


>gi|281338045|gb|EFB13629.1| hypothetical protein PANDA_007591 [Ailuropoda melanoleuca]
          Length = 401

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 84/233 (36%), Gaps = 18/233 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 25  TKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRD--KTVRIW 82

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+   ++   D+ + ++S   Q      L+  
Sbjct: 83  IPNVKGESTVFR--AHTATVRSVHFCSDGQS-FVTASDDKTVKVWSTHRQ-KFLFSLSQH 138

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +      +      +         + P G  
Sbjct: 139 INWVRCARFSPDGRLIVSASD---DKTVKLWDKTSRECVHSYCEHGGFVTSVDFHPSGTC 195

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
           IA            V        RLL    +  + + A ++ PSG  L+ +  
Sbjct: 196 IAAAGMDNTVKVWDV-----RTHRLLQHYQLHSAAVNALSFHPSGNYLLTASS 243



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 76/261 (29%), Gaps = 33/261 (12%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           ++R   H   D +        G            + SG    ++ +   +      +  +
Sbjct: 48  AYRFAGHK--DAVTCVNFSPSG----------HLLASGSRDKTVRIWIPNVKGESTVFRA 95

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    F  + Q    A+ D      V +  T   +    +    + +   RFS +G
Sbjct: 96  HTATVRSVHFCSDGQSFVTASDDK----TVKVWSTHRQKFLFSLSQHINWVRCARFSPDG 151

Query: 270 KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R ++S   D+ + ++  D  S               S  + P  + I           +
Sbjct: 152 -RLIVSASDDKTVKLW--DKTSRECVHSYCEHGGFVTSVDFHPSGTCIAAAGM---DNTV 205

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V         +  Q   A+     + P G+ +           + +M     + RLL  
Sbjct: 206 KVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLLTASSDSTLKILDLM-----EGRLLYT 260

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
               Q P       ++ FSR 
Sbjct: 261 LHGHQGPA-----TTVAFSRT 276


>gi|226228071|ref|YP_002762177.1| putative dipeptidyl peptidase [Gemmatimonas aurantiaca T-27]
 gi|226091262|dbj|BAH39707.1| putative dipeptidyl peptidase [Gemmatimonas aurantiaca T-27]
          Length = 762

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 104/324 (32%), Gaps = 65/324 (20%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           D+N  +  VS +  + +  + +        N  ++  +R  ++    +SP+ +K+A    
Sbjct: 163 DWNLWVRDVSTNQETPLTTDGIKDFGYATDNAGWVHSNRALLM----WSPDSKKIATFQQ 218

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFR---------------SMILAPR------------ 264
           D  ++  +YL+ T++         +                 +  AP+            
Sbjct: 219 DQRNVGEMYLVRTKVGHPELMAWKYPLPGDSVVSMIHRVVIDLSAAPKVVRFRMGPDEHR 278

Query: 265 -----------------FSSNGKRALI-SVQKDEAM-DIYSVDLQSNATERL------TN 299
                            +  +  +    S  +D  +  +   D  S     +      T 
Sbjct: 279 SSVCDHIACGGKLADVEWFPDASKVAFLSNSRDHKIATLRVADAASGEVRDVLREAVATQ 338

Query: 300 TLFINISASYS--PDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSP 356
               +   ++   P ++++++ S+R+   QLY+   N    K +I+  +           
Sbjct: 339 FESGDGDQNWRVLPATNEVIWFSERDDWGQLYLYDLNTGTLKNKITTGEGGVLSIERIDA 398

Query: 357 QGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           +   I FT    EK        +  +  DG    LL  +      + SP G   + S  +
Sbjct: 399 KARTIWFTASGKEKGRDPYFRHLYRIGMDGKALTLLTPEDGDHNISLSPDGARFVDSWSR 458

Query: 411 DGDTGSKLYSIDLNGRNETLINTP 434
                + L      G+   L+ T 
Sbjct: 459 PDLPHTALLRDARTGKQIALLETG 482



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 45/148 (30%), Gaps = 36/148 (24%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD---------------KEASY 349
           +  ++ PD          +G + + ++ + G+     +                 +    
Sbjct: 87  VQPTWLPDGRFTYRVRQPDGSQPMILVDAKGAKTNCTAAGTVCPPAPAPMGPGAPRPTGR 146

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS----------------NLQ 393
              V SP G   AF +     + + V     +QE  L  D                 N  
Sbjct: 147 APEVLSPDGTKAAFIR----DWNLWVRDVSTNQETPLTTDGIKDFGYATDNAGWVHSNRA 202

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              WSP  + +  + ++D     ++Y +
Sbjct: 203 LLMWSPDSKKIA-TFQQDQRNVGEMYLV 229



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 40/134 (29%), Gaps = 42/134 (31%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--------------------ERLTNTLF 302
           P +  +G+      Q D +  +  VD +   T                     R T    
Sbjct: 89  PTWLPDGRFTYRVRQPDGSQPMILVDAKGAKTNCTAAGTVCPPAPAPMGPGAPRPT-GRA 147

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--------------EAS 348
             +    SPD ++  F  D      L+V   + + +  ++ D                ++
Sbjct: 148 PEV---LSPDGTKAAFIRD----WNLWVRDVSTNQETPLTTDGIKDFGYATDNAGWVHSN 200

Query: 349 YFDPVWSPQGDLIA 362
               +WSP    IA
Sbjct: 201 RALLMWSPDSKKIA 214



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 74/263 (28%), Gaps = 42/263 (15%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--- 256
           G N   L  +      +P + P+ +        D     + +            G     
Sbjct: 75  GFNTSLLVSNTG---VQPTWLPDGRFTYRVRQPDGSQPMILVDAKGAKTNCTAAGTVCPP 131

Query: 257 ----------RSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL---- 301
                     R    AP   S +G +A          +++  D+ +N    LT       
Sbjct: 132 APAPMGPGAPRPTGRAPEVLSPDGTKAAFIRD----WNLWVRDVSTNQETPLTTDGIKDF 187

Query: 302 FINISAS-----------YSPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                 +           +SPDS +I  F+ D+    ++Y++++     + ++  K    
Sbjct: 188 GYATDNAGWVHSNRALLMWSPDSKKIATFQQDQRNVGEMYLVRTKVGHPELMAW-KYPLP 246

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIF 406
            D V S    ++     + +      M  D  +  +   +     L    W P    + F
Sbjct: 247 GDSVVSMIHRVVIDLSAAPKVVR-FRMGPDEHRSSVCDHIACGGKLADVEWFPDASKVAF 305

Query: 407 SRKKDGDTGSKLYSIDLNGRNET 429
                    + L   D       
Sbjct: 306 LSNSRDHKIATLRVADAASGEVR 328


>gi|91217138|ref|ZP_01254100.1| prolyl oligopeptidase family protein [Psychroflexus torquis ATCC
           700755]
 gi|91184738|gb|EAS71119.1| prolyl oligopeptidase family protein [Psychroflexus torquis ATCC
           700755]
          Length = 739

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/217 (14%), Positives = 81/217 (37%), Gaps = 14/217 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   ++Y   DD     VY+ + + +   + I     +I    ++++ KR +  + K 
Sbjct: 146 SPDGTYLSYREKDDNLKNHVYVKNIKTNDVQRVITEAEELIRGYGWAND-KRLIYIMDKG 204

Query: 280 EAMD--IYSVDLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDREGKEQL--YVMQS 333
              D  +++VD+  N  + LT    + +   A    D + +V   ++   +    Y +  
Sbjct: 205 GNEDYHLFAVDIDGNNQKELTPYDGVKVEILALLKEDKNHMVISMNKNNAQVFDPYKINI 264

Query: 334 NGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSGE---KFAIGVMKKDGSQERLLV- 387
              + +++ ++ +         +   G+L  F +       +F   V   D    +    
Sbjct: 265 ATGELEQLYENTDITNPIMGYEFDKDGNLRGFARLKDGINSEFYYAVEPGDYKLMKTTKW 324

Query: 388 -EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +  ++ +  ++       +         +++Y  DL
Sbjct: 325 DDTFSIISFDYASENEHDAYMVSNLNSDKTEIYKYDL 361



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 355 SPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKD 411
           SP G  +++ +     K  + V     +  + ++ ++   ++   W+   + LI+   K 
Sbjct: 146 SPDGTYLSYREKDDNLKNHVYVKNIKTNDVQRVITEAEELIRGYGWAND-KRLIYIMDKG 204

Query: 412 GDTGSKLYSIDLNGRNETLIN 432
           G+    L+++D++G N+  + 
Sbjct: 205 GNEDYHLFAVDIDGNNQKELT 225


>gi|21243274|ref|NP_642856.1| peptidase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108811|gb|AAM37392.1| peptidase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 779

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 91/261 (34%), Gaps = 30/261 (11%)

Query: 198 RDGANIRYLTPSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            DG   R  +  R    F+P    +SP+ +++A          R+  ++       + + 
Sbjct: 203 ADGQVTRLSSDGRADDYFDPESVAWSPDSRQLAVYRVRPGLARRITRVEAAPAGGGQPVV 262

Query: 255 NFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           + + +   P  + + +R  L ++           D+ +     L +  +      +  D 
Sbjct: 263 HTQ-LYPKPGDAVDVERPVLFALDGTRR------DVDTA----LFDNPYSLSPLQWRSDG 311

Query: 314 SQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEAS---YFDPVWSPQ----GDLIAFTK 365
             + FE  + G +++ V+  +  S + R++  ++A    Y D  +       GD + +  
Sbjct: 312 RSVAFEYVQRGFQRMRVIAVDAISGRARVAVGEDARTFVYADRSFRHDVDGRGDEVLWIS 371

Query: 366 FSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSG--RSLIFSRKK----DGDTGSKL 418
                  + +   + G  +R L     +           R + F+             +L
Sbjct: 372 ERDGWRHLYLFDGRSGKVKRQLTRGPWVVRDVLRVDDAQRRIWFTASGMDAGKDPYDRQL 431

Query: 419 YSIDLNGRNETLINTPAYASD 439
           YS+D +GR  T +       D
Sbjct: 432 YSVDFDGRRLTRLTHAEADHD 452



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 67/192 (34%), Gaps = 38/192 (19%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINI----SASYSPDSS 314
              PR S + K  +++    +  ++    L      RL+ +    +     S ++SPDS 
Sbjct: 177 DTTPRRSPDAKWEVLA----DGWNLVLRHLADGQVTRLSSDGRADDYFDPESVAWSPDSR 232

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------ 368
           Q+             V +      +RI++ + A          G  +  T+         
Sbjct: 233 QLA------------VYRVRPGLARRITRVEAAPAGG------GQPVVHTQLYPKPGDAV 274

Query: 369 --EKFAIGVMKKDGSQE-RLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSID-L 423
             E+  +  +          L ++    +P  W   GRS+ F   + G    ++ ++D +
Sbjct: 275 DVERPVLFALDGTRRDVDTALFDNPYSLSPLQWRSDGRSVAFEYVQRGFQRMRVIAVDAI 334

Query: 424 NGRNETLINTPA 435
           +GR    +   A
Sbjct: 335 SGRARVAVGEDA 346



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 82/244 (33%), Gaps = 36/244 (14%)

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE----FRL----WDVKDRKQIIG 141
           +      I R +   + G Q +V  ++  +  D + VE    F L     DV     +  
Sbjct: 240 RPGLARRITRVEAAPAGGGQPVVHTQLYPKPGDAVDVERPVLFALDGTRRDVDTA--LFD 297

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +  SP  WR    +++ +  Q           R+  ++   +SG  + ++      G 
Sbjct: 298 NPYSLSPLQWRSDGRSVAFEYVQRGFQ-------RMRVIAVDAISGRARVAV------GE 344

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMI 260
           + R    +        R   + +        + D  R +YL D R  +  +++     ++
Sbjct: 345 DARTFVYADRSF----RHDVDGRGDEVLWISERDGWRHLYLFDGRSGKVKRQLTRGPWVV 400

Query: 261 LAP-RFSSNGKRALISVQKDEA------MDIYSVDLQSNATERLTNTLFINISASYSPDS 313
               R     +R   +    +A        +YSVD       RLT+    +   + + D 
Sbjct: 401 RDVLRVDDAQRRIWFTASGMDAGKDPYDRQLYSVDFDGRRLTRLTHAEA-DHDVAIADDG 459

Query: 314 SQIV 317
              V
Sbjct: 460 LHYV 463


>gi|89886089|ref|NP_989028.2| WD repeat domain 8 [Xenopus (Silurana) tropicalis]
 gi|89266958|emb|CAJ82160.1| WD repeat domain 8 [Xenopus (Silurana) tropicalis]
          Length = 451

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 73/196 (37%), Gaps = 15/196 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +             +++V+ ++        +I    + +++  +S +G+  L + + 
Sbjct: 56  WSSD-SMFILCAMYKRGLVQVWSLEQPDWHC--KIDEGSAGLVSSCWSPDGRHILNTTEF 112

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++S+  +S     +          +++ D   +     R+ K+ + +   N    
Sbjct: 113 HLRITLWSLSAKS--VSYIKYPKACQQGIAFTHDGRHMALAERRDCKDYISIFVCNDWRL 170

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE------DSNL 392
            R  + +        W+P G ++A    +  ++ + +   DG   RLL           +
Sbjct: 171 LRHFETETQDLTGIAWAPNGCVLA-VWDTCLEYKVLLYSLDG---RLLSSYCAYEWSLGI 226

Query: 393 QAPTWSPSGRSLIFSR 408
           ++  WSP+ + L    
Sbjct: 227 KSVAWSPTSQFLAIGS 242


>gi|271966450|ref|YP_003340646.1| hypothetical protein Sros_5120 [Streptosporangium roseum DSM 43021]
 gi|270509625|gb|ACZ87903.1| WD40 repeat-domain-containing protein-like protein
           [Streptosporangium roseum DSM 43021]
          Length = 490

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 70/211 (33%), Gaps = 25/211 (11%)

Query: 223 QQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
             +VA+          +   V L D    +        +       FS +GK        
Sbjct: 257 GYQVAFGRQGSLIAVGNANGVTLYDALTRKKRPVAEFPQDAARTVAFSKDGKTIA---TG 313

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D+   +   ++ ++    LT       S ++SPD S ++  +D EG    ++M+ +   +
Sbjct: 314 DDLKKVRLWNVFTHGEVVLTGNPGRITSVAFSPDGSTLL-SADDEG----FLMRWDTGSR 368

Query: 339 KRISQD--KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           + I +    +       WSP G            +    M K+     +        A  
Sbjct: 369 RPIGEKIQADTYLNAVAWSPDGTFFVTAGDHVRLWNGATMTKELPGTVVTT------AVA 422

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           ++P G  +        DTGS L+     G+ 
Sbjct: 423 FTPGGVLV-----TGDDTGSVLFWDPRTGKT 448


>gi|255955777|ref|XP_002568641.1| Pc21g16340 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211590352|emb|CAP96531.1| Pc21g16340 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 897

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 86/213 (40%), Gaps = 22/213 (10%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +A+ +     +L V+   +      K+ G+  SM  A  +S +G+R + +   D  
Sbjct: 306 SGEWLAFGSSKHGQLL-VWEWQSE-SYILKQQGHLDSMN-ALAYSPDGQRIV-TAADDGK 361

Query: 282 MDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + ++  D++S       T       +  ++   S ++F +  +G  + + +     + + 
Sbjct: 362 IKVW--DVKSGFCIVTFTEHTSGVTACQFAKKGS-VLFTASLDGSIRAWDL-IRYRNFRT 417

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
            +     S+      P G++I     S + F I V        +LL + S  + P     
Sbjct: 418 FTAPSRVSFSSLAVDPSGEVI--CAGSPDSFDIHVWSVQTG--QLLDQLSGHEGPVSSLA 473

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           ++  G  L+       D   +++SI   GR++T
Sbjct: 474 FAADGNHLVSGSW---DHTVRIWSIF--GRSQT 501



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 73/230 (31%), Gaps = 13/230 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                  L V +    +           +    +SP+ Q++  A  D +    + + D +
Sbjct: 313 GSSKHGQLLVWEWQSESYILKQQGHLDSMNALAYSPDGQRIVTAADDGK----IKVWDVK 368

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                       S + A +F+  G   L +   D ++  + + ++       T    ++ 
Sbjct: 369 SGFCIVTFTEHTSGVTACQFAKKG-SVLFTASLDGSIRAWDL-IRYRNFRTFTAPSRVSF 426

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S S + D S  V  +       ++V               E       ++  G+ +    
Sbjct: 427 S-SLAVDPSGEVICAGSPDSFDIHVWSVQTGQLLDQLSGHEGPVSSLAFAADGNHLVSGS 485

Query: 366 FSGEKFAIGVM--KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +      I  +  +   S+   L+ D  + +  + P G+ +  +   DG 
Sbjct: 486 WDHTV-RIWSIFGRSQTSEPLQLMSD--ILSVAFRPDGQQVA-ASTLDGQ 531


>gi|327273849|ref|XP_003221692.1| PREDICTED: WD repeat-containing protein 17-like isoform 2 [Anolis
           carolinensis]
          Length = 1285

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 68/197 (34%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P +   +A AT  +      ++ D 
Sbjct: 389 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSVSWAPGDLNCIAGATSRNG----AFIWDV 444

Query: 245 RIDRAPKRIGNF-RSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
              +   R     ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 445 SRGKMITRFSEHGKNGIFCIAWSHKDSKRIA-TCSGDGFCIIRTID--GKVLHKY-KHPA 500

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 501 AVFGCDWSQNNKDMIATGCEDKNVRVYYLATSSDQPLKVFSGHTAKVFHVRWSPLREGIL 560

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 561 CSGSDDGTVRIWDYTQD 577


>gi|327273847|ref|XP_003221691.1| PREDICTED: WD repeat-containing protein 17-like isoform 1 [Anolis
           carolinensis]
          Length = 1304

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 68/197 (34%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P +   +A AT  +      ++ D 
Sbjct: 389 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSVSWAPGDLNCIAGATSRNG----AFIWDV 444

Query: 245 RIDRAPKRIGNF-RSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
              +   R     ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 445 SRGKMITRFSEHGKNGIFCIAWSHKDSKRIA-TCSGDGFCIIRTID--GKVLHKY-KHPA 500

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 501 AVFGCDWSQNNKDMIATGCEDKNVRVYYLATSSDQPLKVFSGHTAKVFHVRWSPLREGIL 560

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 561 CSGSDDGTVRIWDYTQD 577


>gi|299135528|ref|ZP_07028712.1| peptidase S9B dipeptidylpeptidase IV domain protein [Acidobacterium
           sp. MP5ACTX8]
 gi|298601652|gb|EFI57806.1| peptidase S9B dipeptidylpeptidase IV domain protein [Acidobacterium
           sp. MP5ACTX8]
          Length = 792

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 52/158 (32%), Gaps = 17/158 (10%)

Query: 265 FSSNGKRALISVQKDEAMDIY--SVDLQSNATERL------TNTLFIN--ISASYSPDSS 314
           F+ +GK         +  D +    D ++ A   +      T        +S  Y P+S+
Sbjct: 309 FAPDGKHLAFVSSSRDHKDAWFRVADTETGAVREVYHEHVPTYYESGQGKVSWRYLPESN 368

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---- 370
           + V+ S+R+   QLY+        K      E            + + +   +G++    
Sbjct: 369 EFVWYSERDNWGQLYLYDLTTGKLKNQITHGEGPVNQLSQVDTKNRVLYFLATGKEKEDD 428

Query: 371 ---FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                      DG  ++LL         T SP   + +
Sbjct: 429 PYFVKYYRADFDGQHQQLLTPKMADHVITPSPDSSTFV 466



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 63/201 (31%), Gaps = 44/201 (21%)

Query: 267 SNGKRALISVQKDEAMDIYSV-DLQSNA----------TERLTNTLFINISAS------Y 309
            +G+  +     D    +Y + D                  LT      +SA       Y
Sbjct: 57  PDGR--VFYSDPDPEGVVYRLADPAHGTQAPAFDNAKLATALTAVSKRAVSAKHLGVTGY 114

Query: 310 SPDSSQIVFESDREGK----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +PD++   F  D        +   V  +  +  K  +     S      SP   L AF +
Sbjct: 115 TPDAAGGGFTVDLGWNKFHCDAAVVACTAVTAPKPAAGKPAGSKAPFDLSPDKKLAAFIR 174

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDS--------------NLQAP--TWSPSGRSLIFSRK 409
            +     + V  +   +ER L  D               +  AP   WSP  + +  + +
Sbjct: 175 DN----NLWVRVEATGEERQLTRDGVKDFGYATDNAGWTHSDAPIVVWSPDSKKIA-TFQ 229

Query: 410 KDGDTGSKLYSIDLNGRNETL 430
           +D      LY + +  R+  L
Sbjct: 230 QDQRKTGSLYLVPVTNRHPQL 250



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 54/367 (14%), Positives = 103/367 (28%), Gaps = 62/367 (16%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           G + L  GRV     D   V +RL D     Q           +   ++       +  +
Sbjct: 52  GIEYLPDGRVFYSDPDPEGVVYRLADPAHGTQAPAFDNAKLATALTAVSKRAVSAKHLGV 111

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQK 225
           TG   D       V              V+             +      P   SP+++ 
Sbjct: 112 TGYTPDAAGGGFTVDL--GWNKFHCDAAVVACTAVTAPKPAAGKPAGSKAPFDLSPDKKL 169

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIG----------NFRSMILAP--RFSSNGKRAL 273
            A+     ++ L V +  T  +R   R G             +   AP   +S + K+  
Sbjct: 170 AAFI---RDNNLWVRVEATGEERQLTRDGVKDFGYATDNAGWTHSDAPIVVWSPDSKKIA 226

Query: 274 -ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                + +   +Y V + +   +             Y     + V    R       V+ 
Sbjct: 227 TFQQDQRKTGSLYLVPVTNRHPQL--------DEWKYPLAGDKDVTTIQR------VVID 272

Query: 333 SNGSDQKRI---------------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG--V 375
            + +   R+               S    + + D  ++P G  +AF   S +       V
Sbjct: 273 VDTARMTRLKMPPDQHRSTICDDVSCSGGSGWDDVQFAPDGKHLAFVSSSRDHKDAWFRV 332

Query: 376 MKKDGSQERLLVE---------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NG 425
              +    R +                +  + P     ++  ++D     +LY  DL  G
Sbjct: 333 ADTETGAVREVYHEHVPTYYESGQGKVSWRYLPESNEFVWYSERDN--WGQLYLYDLTTG 390

Query: 426 RNETLIN 432
           + +  I 
Sbjct: 391 KLKNQIT 397


>gi|145476749|ref|XP_001424397.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124391461|emb|CAK56999.1| unnamed protein product [Paramecium tetraurelia]
          Length = 423

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/291 (14%), Positives = 88/291 (30%), Gaps = 40/291 (13%)

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                  ++WD    +Q++  +            H   + +Y         F  R++   
Sbjct: 111 GSYDRTCKVWDTFTGEQLVSLE-----------GHK--NVVY--CIAFNNPFGDRVV--- 152

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
               +G    +  + D +              +    F P+   VA  + D        L
Sbjct: 153 ----TGSFDKTAKIWDANSGKCLQTLVGHQYEIVCISFDPHSLLVATGSMDK----TARL 204

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +   R+      I++  F+S+G + L +   D+   I+  D++S     + +  
Sbjct: 205 WDVETGKQIARLDGHEGEIVSLHFNSDGDKLL-TGSFDKTAMIW--DVRSGECIHILDEH 261

Query: 302 FINISASYSPDSSQIVFESDREGKEQL----YVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              IS      S+Q  F  D  G   +     +            +  +    D  ++  
Sbjct: 262 TGEIS------STQFEFTGDYCGTGSIDKTCKIWDIKTGKCIETLRGHQDEVQDICFNST 315

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           G  +           +  +       +LL     +    ++PSG  +I + 
Sbjct: 316 GTRLVTVSADATG-RLYNVHTGECIAQLLGHKGEISKVAFNPSGNKIITAS 365



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 58/196 (29%), Gaps = 32/196 (16%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG------------------KKFFSSPASW 151
           ++ TG + K          RLWDV+  KQI                    K    S    
Sbjct: 192 LVATGSMDKTA--------RLWDVETGKQIARLDGHEGEIVSLHFNSDGDKLLTGSFDKT 243

Query: 152 RKIAHTISDDIYQSITGEKG-DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
             I    S +    +    G   +++  F  +   +G I  +  + D             
Sbjct: 244 AMIWDVRSGECIHILDEHTGEISSTQFEFTGDYCGTGSIDKTCKIWDIKTGKCIETLRGH 303

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
              + +  F+    ++   + D        L +        ++   +  I    F+ +G 
Sbjct: 304 QDEVQDICFNSTGTRLVTVSADATGR----LYNVHTGECIAQLLGHKGEISKVAFNPSGN 359

Query: 271 RALISVQKDEAMDIYS 286
           +  I+   D    I+S
Sbjct: 360 KI-ITASADNTARIFS 374


>gi|302691546|ref|XP_003035452.1| hypothetical protein SCHCODRAFT_38688 [Schizophyllum commune H4-8]
 gi|300109148|gb|EFJ00550.1| hypothetical protein SCHCODRAFT_38688 [Schizophyllum commune H4-8]
          Length = 419

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 80/243 (32%), Gaps = 21/243 (8%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +  +++G       + +    N   +  + D  +    F  +   +A A   D+  +  Y
Sbjct: 120 ARRILTGSTSGEFTLWNGLTFNFETILQAHDTAICTFEFCHSGHYLASA---DKTGVIKY 176

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                 +    +  N R  I    FS + +R   +   D ++ I+S   +S     LT  
Sbjct: 177 FEPNMNNLNSWQGSNSREAIRGLSFSPDDRRFA-TASDDSSVRIWSF-HESRIESVLTGH 234

Query: 301 LFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              ++    + P    IV  S      Q+                 + +     WSP G+
Sbjct: 235 -GWDVKCVQWHPTKGLIVSGSK---DNQIKYWDPRTGTCLSTLHYHKNTIQALSWSPNGN 290

Query: 360 LIAFTKFSG--EKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            IA          F I  MK    +  LL      + + TW P+   L+      G  G+
Sbjct: 291 QIASASRDQTVRVFDIRAMK----ELHLLKGHKKEVCSVTWHPTHPVLV----SGGSEGA 342

Query: 417 KLY 419
            L+
Sbjct: 343 VLH 345



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 66/204 (32%), Gaps = 9/204 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++P  +++   +   E      L +         +    + I    F  +G     S  
Sbjct: 115 TWTPEARRILTGSTSGEFT----LWNGLTFNFETILQAHDTAICTFEFCHSGHYLA-SAD 169

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           K   +  +  ++ +  + + +N+       S+SPD  +    SD      + +   + S 
Sbjct: 170 KTGVIKYFEPNMNNLNSWQGSNSREAIRGLSFSPDDRRFATASD---DSSVRIWSFHESR 226

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            + +            W P   LI  +     +      +       L    + +QA +W
Sbjct: 227 IESVLTGHGWDVKCVQWHPTKGLIV-SGSKDNQIKYWDPRTGTCLSTLHYHKNTIQALSW 285

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSI 421
           SP+G  +  + +        + ++
Sbjct: 286 SPNGNQIASASRDQTVRVFDIRAM 309



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 43/151 (28%), Gaps = 18/151 (11%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG   N +   D                +    +SPN  ++A A+ D      V + D 
Sbjct: 251 VSGSKDNQIKYWDPRTGTCLSTLHYHKNTIQALSWSPNGNQIASASRDQ----TVRVFDI 306

Query: 245 RIDRAPKRIGNFRSMILAPRFSS-------NGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R  +    +   +  + +  +          G    +      A    +     + +  L
Sbjct: 307 RAMKELHLLKGHKKEVCSVTWHPTHPVLVSGGSEGAVLHWDLGAAPTETSGAAGSGSTTL 366

Query: 298 -------TNTLFINISASYSPDSSQIVFESD 321
                  T       S +Y P    +V  S+
Sbjct: 367 APRAVVNTAHDSNVWSLAYHPLGHLLVSASN 397


>gi|270339782|ref|ZP_06006005.2| peptidase [Prevotella bergensis DSM 17361]
 gi|270333809|gb|EFA44595.1| peptidase [Prevotella bergensis DSM 17361]
          Length = 753

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/210 (15%), Positives = 76/210 (36%), Gaps = 16/210 (7%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATE-R 296
           Y  DTR  R     G+     ++  +  +      +   +  + + +  +DL +      
Sbjct: 271 YNADTRQGRLLPVQGSMTDPTVSMAYGESNDTLWFTRRSRSVDTLQLCRIDLPTGTITEV 330

Query: 297 LTNTLFINISASYS-----PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           +T     +++ ++S         +I++ S+R G+   Y+   +G  + R+++  +     
Sbjct: 331 ITEVSKPHLNVTFSGYRFIRGGREILWWSERTGRGNYYLYDVDGKLKNRVTRGDKLVAGR 390

Query: 352 -PVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
               + +   + FT                     G +++LL   +      +SP+GR  
Sbjct: 391 IEHINEKAGYMIFTGYGLENSSDPGYTYYYKADLKGRRQQLLTPGNGTHELQFSPNGRYA 450

Query: 405 IFSRKK-DGDTGSKLYSIDLNGRNETLINT 433
           I S  + D     ++  ++  GR      T
Sbjct: 451 IDSYSRMDMPPVYQIVDVEHPGRAREFART 480



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 73/247 (29%), Gaps = 35/247 (14%)

Query: 143 KFFSSPASWRKIAHTISDDIYQ-----------SITGEKGDFNSRILFVSESVVSGIIKN 191
           K   +  S R   H   D +Y            +I+G +    ++   +      G+ + 
Sbjct: 209 KLNGNNVSGRWYGHVFIDFVYDDSEVGDLYILDAISGHRPKLRTKK--MPLPNEKGVRRF 266

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK----VAYATYDDE-DILRVYLMDTRI 246
            L   + D    R L       + +P  S    +    + +       D L++  +D   
Sbjct: 267 KLFWYNADTRQGRLLPVQGS--MTDPTVSMAYGESNDTLWFTRRSRSVDTLQLCRIDLPT 324

Query: 247 DRAPKRIGNFRSMILAPRFS-----SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
               + I       L   FS       G+  L   ++    + Y  D+      R+T   
Sbjct: 325 GTITEVITEVSKPHLNVTFSGYRFIRGGREILWWSERTGRGNYYLYDVDGKLKNRVTRGD 384

Query: 302 FINIS--ASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            +        +  +  ++F       S   G    Y     G  Q+ ++        +  
Sbjct: 385 KLVAGRIEHINEKAGYMIFTGYGLENSSDPGYTYYYKADLKGRRQQLLTPGNGT--HELQ 442

Query: 354 WSPQGDL 360
           +SP G  
Sbjct: 443 FSPNGRY 449


>gi|239945041|ref|ZP_04696978.1| hypothetical protein SrosN15_28895 [Streptomyces roseosporus NRRL
           15998]
 gi|239991503|ref|ZP_04712167.1| hypothetical protein SrosN1_29637 [Streptomyces roseosporus NRRL
           11379]
          Length = 940

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 117/325 (36%), Gaps = 39/325 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH-------------TISD 160
           GR++ EG +   V  R+WD+ DR++        + ++ R +A               ++ 
Sbjct: 346 GRLLAEGGNTGEV--RIWDLSDRRKPRRLSSVWTLSTVRDLAFDESASVLVVGSGTRVAA 403

Query: 161 DIYQSITGEKGDFNSRILFVSESVVS-----------GIIKNSLCVMDRDGANIRYLTPS 209
              +     +    S  + VS    +           G   + + V+   G+       +
Sbjct: 404 VDVRDPARPRVTGVSSGVTVSLGSGTAISGDGTLIATGAADDKVRVLRVSGSGELSTLTT 463

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSN 268
            D       FSP+   +A  T  ++  +R++ M       P+   +  S  + +  FS++
Sbjct: 464 IDAPSAAVSFSPSGHLLA--TAGEDRTVRLWDMARPRRPEPRTALHSPSESVRSVAFSAD 521

Query: 269 GKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVF-----ESD 321
           G+    +   + ++ ++ V    +    E L    F+  S ++SPD   +        S+
Sbjct: 522 GRTLA-TGDTEGSVHLWDVSDPFRPRQGETLDGHTFVVNSLAFSPDGRTLASAAWDTVSE 580

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                 + +   +G+ +             P  ++P G  +  T   G  + +  + +  
Sbjct: 581 ELSDNTVRLWNVHGARRSSAHVFLPGDGLSPQPFAPTGG-VVVTGRPGAIWKVDGVPEPR 639

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI 405
               L    S  Q  ++SP GR+L 
Sbjct: 640 RLATLPSFRSGGQDYSFSPDGRTLA 664



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 12/185 (6%)

Query: 269 GKRALISVQKDE-AMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVFESDREGK 325
           G RALI+  +D  A+ ++ V        R T     +   S + + D   + F  D  G 
Sbjct: 751 GDRALIASVRDRKAVQLWDVGRPDRPVRRGTVPVGPWRTGSLATTADGGTL-FVGDARGG 809

Query: 326 EQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +  +    +   SQ    +       P G+++A    +     +  +        
Sbjct: 810 MTAWDITDARRPKRLGASQRHSGAITRLAADPVGNMLAGVDENSGSVRLWDVADPSVPRE 869

Query: 385 LLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           + +       P+   +SP G  L  S     D G++L+  D+    + L    A  ++ Q
Sbjct: 870 IALLAGTGTRPSGLAFSPDGGLLAVSS----DDGTQLWRTDVGPILQQLCAQSAPITEAQ 925

Query: 442 WVGFM 446
           W  ++
Sbjct: 926 WKEYL 930



 Score = 36.9 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 48/159 (30%), Gaps = 15/159 (9%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVS---GIIKNSLCVMDR-DGANIRYL--TPSRDQI 213
           D   +  T   G + +  L  +    +   G  +  +   D  D    + L  +      
Sbjct: 774 DRPVRRGTVPVGPWRTGSLATTADGGTLFVGDARGGMTAWDITDARRPKRLGASQRHSGA 833

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGK 270
           +      P    +A     DE+   V L D      P+ I         P    FS +G 
Sbjct: 834 ITRLAADPVGNMLAGV---DENSGSVRLWDVADPSVPREIALLAGTGTRPSGLAFSPDGG 890

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              +S   D+   ++  D+     ++L         A +
Sbjct: 891 LLAVSS--DDGTQLWRTDV-GPILQQLCAQSAPITEAQW 926


>gi|71018393|ref|XP_759427.1| hypothetical protein UM03280.1 [Ustilago maydis 521]
 gi|46099034|gb|EAK84267.1| hypothetical protein UM03280.1 [Ustilago maydis 521]
          Length = 731

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 72/230 (31%), Gaps = 36/230 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM------ILAPRFSSNGKR 271
           RFS + + +A             + DT+       + +  +       I +  FS +GK 
Sbjct: 423 RFSADGKYLA-----TGCNKSAQIFDTKTGAKTCVLTDQSANSKGDLYIRSVCFSPDGKC 477

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYV 330
              +  +D  + I+  D+     + L +       S  YS D   I   S   G + + +
Sbjct: 478 LA-TGAEDRQIRIW--DIGKKKVKHLFSGHKQEIYSLDYSKDGRIIASGS---GDKTVRI 531

Query: 331 MQSNGSDQKRISQDKEASYFDPV--------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                                P          S    L+A          + V      +
Sbjct: 532 WDVENGQLLHTLYTSPGLEHGPSEAGVTSVSISSDNRLVAAGALDT---LVRVWDAQTGK 588

Query: 383 --ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             ERL     ++ + +++P G+SL+      G     L   DL G  + +
Sbjct: 589 QLERLKSHKDSIYSVSFAPDGKSLV-----SGSLDKTLKLWDLTGTAKAV 633



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 71/220 (32%), Gaps = 40/220 (18%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--------FSPNQQKVAYATYDDEDIL 237
           SG    ++ + D +   + +   +   +   P          S + + VA    D     
Sbjct: 522 SGSGDKTVRIWDVENGQLLHTLYTSPGLEHGPSEAGVTSVSISSDNRLVAAGALDT---- 577

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---- 293
            V + D +  +  +R+ + +  I +  F+ +GK  + S   D+ + ++  DL   A    
Sbjct: 578 LVRVWDAQTGKQLERLKSHKDSIYSVSFAPDGKSLV-SGSLDKTLKLW--DLTGTAKAVQ 634

Query: 294 -------------TERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQK 339
                                   +S S SPD   +   S DR     +       +  +
Sbjct: 635 ENRAEEKGGHANCATTFVGHKDYVLSVSCSPDGQWVASGSKDRG----VQFWDPKTAQAQ 690

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            + Q  + S      SP G L+A        F   +   D
Sbjct: 691 FVLQGHKNSVIAINLSPAGGLLA---TGSGDFNARIWSYD 727



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 80/232 (34%), Gaps = 43/232 (18%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR+I  G     V  R+WDV++ + +     ++SP     + H  S+     +T      
Sbjct: 517 GRIIASGSGDKTV--RIWDVENGQLL--HTLYTSPG----LEHGPSEA---GVTSVSISS 565

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++R++       +G +   + V D           S    ++   F+P+ + +   + D 
Sbjct: 566 DNRLV------AAGALDTLVRVWDAQTGKQLERLKSHKDSIYSVSFAPDGKSLVSGSLDK 619

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------------SSNGKRALISVQKDEA 281
              L       +  +  +          A  F            S +G+    S  KD  
Sbjct: 620 TLKLWDLTGTAKAVQENRAEEKGGHANCATTFVGHKDYVLSVSCSPDGQWVA-SGSKDRG 678

Query: 282 MDIYSVDLQSNATERLTNT-----LFINISA------SYSPDSSQIVFESDR 322
           +  +  D ++   + +        + IN+S       + S D +  ++  DR
Sbjct: 679 VQFW--DPKTAQAQFVLQGHKNSVIAINLSPAGGLLATGSGDFNARIWSYDR 728


>gi|297666647|ref|XP_002811628.1| PREDICTED: WD repeat-containing protein 8-like [Pongo abelii]
          Length = 460

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 82/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D +   I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDVNTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYKRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACLQGITF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + +   +     R             W+P G ++A    +  
Sbjct: 142 TRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-VWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKD 411
           ++ I +   DG   RLL   S  +      +  WSPS + L       
Sbjct: 201 EYKILLYSLDG---RLLSAYSAYEWSLGIKSVAWSPSSQFLAVGSYDG 245



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 9/157 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK     VQ      +   D+ +    +L   L       +S DS  I+    + G
Sbjct: 16  FSPDGKYLASCVQ----YRLVVRDVNTLQILQLYTCLDQIQHIEWSADSLFILCAMYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++    +      +  A      WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSVS 127

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +       Q  T++  GR +  + ++D      ++ 
Sbjct: 128 YIKYPKACLQGITFTRDGRYMALAERRDCKDYVSIFV 164


>gi|299470442|emb|CBN78434.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 447

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 69/238 (28%), Gaps = 41/238 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+ + V     D    + V+ + TR     ++       I    FS +     ++ ++
Sbjct: 104 WAPDARHVV-TFSDFSLHMSVWSLSTRQLHTVRQPKAAPGCI---AFSPDALIMAVATRR 159

Query: 279 DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D    +   D +S  +    T          +SPD   +  + D     ++      G  
Sbjct: 160 DCRDHLKLYDTRSWESLGEFTAETVDLTHVDFSPDGFTLCLQ-DTSLDYRVMFYSLAGKL 218

Query: 338 QKRISQDKEA-SYFDPVWSPQGDLIAFTKFSG----------------EKFAIGVMKKDG 380
             R+     A       WSP G L++   +                            D 
Sbjct: 219 VGRLEAYSHALGVKSMAWSPDGTLLSVGSYDQCARLVSPVTWKAVAVLRHVHPKTQDVDI 278

Query: 381 SQERLLVEDSNLQAP---------------TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +    L      + P               +WS  GR L     ++ +  S L+  D 
Sbjct: 279 TYAPALTGPIPSERPDPSKPHPRLGVGQIMSWSVDGRYLA---TRNDNMASALWVWDT 333



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 71/185 (38%), Gaps = 9/185 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ + VA        ++R  +    I +   R    +  I A  ++S+    L ++ K
Sbjct: 18  WSPDGRYVA-MAVGKRLMVRDAMDGFEIVQGGLRPCLDK--IEALEWASDSDLLLCAMYK 74

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              +++ SV  + +   R+   L   + A ++PD+  +V  SD      ++ + +     
Sbjct: 75  RSLVEVMSV-ARPDWQCRIREGLAGMVKALWAPDARHVVTFSDFSLHMSVWSLSTRQLHT 133

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVEDSNLQAPT 396
            R     +A+     +SP   ++A       +  + +       S      E  +L    
Sbjct: 134 VR---QPKAAPGCIAFSPDALIMAVATRRDCRDHLKLYDTRSWESLGEFTAETVDLTHVD 190

Query: 397 WSPSG 401
           +SP G
Sbjct: 191 FSPDG 195


>gi|281206670|gb|EFA80856.1| hypothetical protein PPL_06445 [Polysphondylium pallidum PN500]
          Length = 760

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 77/224 (34%), Gaps = 25/224 (11%)

Query: 214 LFEPRFSPNQQKVAYATYDDED-ILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNG 269
           ++  +FS N +K+A  + D +  I  +  +   + + P+ +              +S + 
Sbjct: 431 VWYLKFSNNGKKLASCSKDSQILIWDMSTLYEAVPQEPRVLATLSGHNKDVSYLSWSPD- 489

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QL 328
            R LIS   D ++ ++SVD ++   +  +         ++ PD  + V      G +  L
Sbjct: 490 DRYLISASSDNSVKLWSVD-EAVCLKTYSKHTDAVTCCAWHPDGKRFV----SGGNDKNL 544

Query: 329 YVMQSNGSDQK-----RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           Y+      +        I     A   D      G  +           I +   D  + 
Sbjct: 545 YLWNIATPETTHQVSVPIRSWACARVNDMAIHRDGKQLIVICQEK---KIRIFDIDAERP 601

Query: 384 RL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            + + E   + +   S   R +I        +  +++  DL  R
Sbjct: 602 EISIAETEAIMSMALSQDSRYIIV-----NTSNQEIHLWDLEKR 640


>gi|302927765|ref|XP_003054566.1| hypothetical protein NECHADRAFT_90419 [Nectria haematococca mpVI
           77-13-4]
 gi|256735507|gb|EEU48853.1| hypothetical protein NECHADRAFT_90419 [Nectria haematococca mpVI
           77-13-4]
          Length = 646

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 87/231 (37%), Gaps = 34/231 (14%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-- 265
            S+ + L  PR SP   + A+ T   ED     +  T+          + +      +  
Sbjct: 22  TSKTRSLSTPRASPKSGR-AFYTEGREDGSTAIVEITKDGLNEVLPAEYSAKNTVYEYGG 80

Query: 266 SS----NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           S     +  R + S   ++   ++ ++  +     LT++  +  S ++  + +     ++
Sbjct: 81  SPYAILSDDRIIFS---NKGNTVHILNPDTKEVTHLTSSPNLRYS-NFDANPTSPWVLAN 136

Query: 322 REG---------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +E          +  +  + +  ++ KRI +D    Y+ P +S  G  +A+ +++     
Sbjct: 137 QEDHEHDTPDQIRNYIVAINTETAEVKRI-RDNADFYYTPHFSFDGTKVAWLEWNHPDLP 195

Query: 373 I-------GVMKKDG--SQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDG 412
                        DG  S  R++  D+      P W P G   +F  K++G
Sbjct: 196 FDAAKLYSATWNPDGSVSDVRIIAGDNREGVAEPRWGPDGS--LFFGKEEG 244



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 72/225 (32%), Gaps = 25/225 (11%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTL 301
           D +   + + I +    +  PR S    RA  +  ++D +  I  +              
Sbjct: 11  DWKSPISVESITSKTRSLSTPRASPKSGRAFYTEGREDGSTAIVEITKDGLNEVLPAEYS 70

Query: 302 FINISASYSPDSSQIVFESD-----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             N    Y    S     SD           ++++  +  +   ++      Y +   +P
Sbjct: 71  AKNT--VYEYGGSPYAILSDDRIIFSNKGNTVHILNPDTKEVTHLTSSPNLRYSNFDANP 128

Query: 357 QGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSR 408
               +   +   E       +  I  +  + ++ + + ++++    P +S  G  + +  
Sbjct: 129 TSPWVLANQEDHEHDTPDQIRNYIVAINTETAEVKRIRDNADFYYTPHFSFDGTKVAWLE 188

Query: 409 KKDGDT---GSKLYSI--DLNGRNETLINTPAY----ASDPQWVG 444
               D     +KLYS   + +G    +           ++P+W  
Sbjct: 189 WNHPDLPFDAAKLYSATWNPDGSVSDVRIIAGDNREGVAEPRWGP 233



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 84/244 (34%), Gaps = 30/244 (12%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-------- 238
             I+N +  ++ + A ++ +  + D   + P FS +  KVA+  ++  D+          
Sbjct: 146 DQIRNYIVAINTETAEVKRIRDNAD-FYYTPHFSFDGTKVAWLEWNHPDLPFDAAKLYSA 204

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD---------- 288
            +  D  +       G+ R  +  PR+  +G       ++     ++ V           
Sbjct: 205 TWNPDGSVSDVRIIAGDNREGVAEPRWGPDG-SLFFGKEEGAFRKLFRVPPGADVPVEIK 263

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRI---SQD 344
           L         +  +   S +Y+P SS+ +  +    G  ++ V+  +    K I   S  
Sbjct: 264 LDGLDDSEFGDLRWFQGSHTYAPLSSRFLIAAPVTLGVSKVIVVDLDAGSWKEIGDPSIL 323

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            E              +     +G   A+ + + + +    + +  N     + P     
Sbjct: 324 SEVILDSVARLDDTSFL--ITGAGTTSALALYRVNIADSVQVTKLRNSTEEAF-PDS--- 377

Query: 405 IFSR 408
           I+SR
Sbjct: 378 IYSR 381


>gi|332710163|ref|ZP_08430116.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332351121|gb|EGJ30708.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 644

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 72/209 (34%), Gaps = 17/209 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSPN + +A  + D      + + + +      ++    ++I A  FS +G+    S  
Sbjct: 362 AFSPNGETIASGSTDK----TITIFNWQAKTVVAKLSGHLNVIEAVSFSPDGEIIA-SSS 416

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + ++  +   N    L          + S +   I   S     + + +     + 
Sbjct: 417 WDHTIKLW-HEYTGNLIHTLCGHSAWVKCLAISHNGQLIASGS---ADQTIKLWLLKKAS 472

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAP 395
            +        +      S  G L+A          I +      +    +    +++++ 
Sbjct: 473 LQTTLFGHLGTVNAVAISKHGQLLASGSADKT---IKLWNLVTGKLAATITGHSASVESL 529

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           T+SPSG+ LI       D   K++ +  +
Sbjct: 530 TFSPSGQILI---SGSADKTIKIWLLKRD 555



 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 82/248 (33%), Gaps = 19/248 (7%)

Query: 167 TGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
             E+    + I F     ++ SG    ++ + +     +         ++    FSP+ +
Sbjct: 351 FSEESSGINSIAFSPNGETIASGSTDKTITIFNWQAKTVVAKLSGHLNVIEAVSFSPDGE 410

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +A +++D      + L           +    + +     S NG+    S   D+ + +
Sbjct: 411 IIASSSWDH----TIKLWHEYTGNLIHTLCGHSAWVKCLAISHNGQLIA-SGSADQTIKL 465

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + +   S  T  L   L    + + S     +   S     + + +              
Sbjct: 466 WLLKKASLQTT-LFGHLGTVNAVAISKHGQLLASGS---ADKTIKLWNLVTGKLAATITG 521

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG------SQERLLVEDSN-LQAPTW 397
             AS     +SP G  I  +  + +   I ++K+D            L    N +++   
Sbjct: 522 HSASVESLTFSPSGQ-ILISGSADKTIKIWLLKRDRYLQIPKKPLVTLTGHGNAVKSIAI 580

Query: 398 SPSGRSLI 405
           SP G +LI
Sbjct: 581 SPQGNTLI 588



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 67/185 (36%), Gaps = 10/185 (5%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            DT   +         S I +  FS NG+    S   D+ + I++   ++    +L+  L
Sbjct: 340 FDTPTWKCVHTFSEESSGINSIAFSPNGETIA-SGSTDKTITIFNWQAKT-VVAKLSGHL 397

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +  + S+SPD   I   S       + +      +         A       S  G LI
Sbjct: 398 NVIEAVSFSPDGEIIASSS---WDHTIKLWHEYTGNLIHTLCGHSAWVKCLAISHNGQLI 454

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           A +  + +   + ++KK   Q  L      + A   S  G+ L        D   KL+++
Sbjct: 455 A-SGSADQTIKLWLLKKASLQTTLFGHLGTVNAVAISKHGQLLA---SGSADKTIKLWNL 510

Query: 422 DLNGR 426
            + G+
Sbjct: 511 -VTGK 514



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 56/151 (37%), Gaps = 10/151 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-T 244
           SG    ++ + +     +          +    FSP+ Q +   + D    ++++L+   
Sbjct: 498 SGSADKTIKLWNLVTGKLAATITGHSASVESLTFSPSGQILISGSAD--KTIKIWLLKRD 555

Query: 245 RIDRAPKR----IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           R  + PK+    +    + + +   S  G    IS   D+ + I+           LT+ 
Sbjct: 556 RYLQIPKKPLVTLTGHGNAVKSIAISPQGNTL-ISGSADKTVKIW-HPGSGELLYTLTDH 613

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVM 331
           L    S + S D + I   S ++   +++  
Sbjct: 614 LSAVTSVAISHDGATIA-SSSQDNTIKIWKF 643


>gi|328773450|gb|EGF83487.1| hypothetical protein BATDEDRAFT_22217 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 424

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 74/192 (38%), Gaps = 16/192 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALIS 275
           +FSP+ + +A          R+++ +T      + +  F+ +       +SS+      +
Sbjct: 16  KFSPDGEHLAIVLDH-----RLFVRNTET---LQIVALFKCLDSIQDIGWSSDSVYIFCT 67

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +   + ++S+      T ++   L   ++  ++PD+  ++  SD +   ++ V     
Sbjct: 68  SFRLGNIQVFSL-TDETWTAQMDEGLAGCVAVRWTPDARHLLSFSDFQ--LRITVWSLCT 124

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK--KDGSQERLLVEDSNLQ 393
            D   I   K +       S  G   A  + S  K  I + +       +R  V  S++ 
Sbjct: 125 KDAVYIQYPKFSDRGYCFRS-DGKYFALIERSENKDYISIYECCDWTLLKRWPVASSDVD 183

Query: 394 APTWSPSGRSLI 405
              WSP GR L 
Sbjct: 184 GIAWSPDGRFLA 195



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 61/196 (31%), Gaps = 9/196 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +   +   ++   +   + +     +    ++    +  +A R++ + +  L     
Sbjct: 57  WSSDSVYIFCTSFRLGN---IQVFSLTDETWTAQMDEGLAGCVAVRWTPDARHLL--SFS 111

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + I    L +     +    F +    +  D          E K+ + + +      
Sbjct: 112 DFQLRITVWSLCTKDAVYIQYPKFSDRGYCFRSDGKYFALIERSENKDYISIYECCDWTL 171

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAP 395
            +      +      WSP G  +A       ++ + +   DG              +++ 
Sbjct: 172 LKRWPVASSDVDGIAWSPDGRFLA-AWEPNIEYCVYIYYPDGRLVHKYSAYDSGLGVKSV 230

Query: 396 TWSPSGRSLIFSRKKD 411
            WSPSG+ L       
Sbjct: 231 KWSPSGQFLAIGSYDQ 246


>gi|302893384|ref|XP_003045573.1| hypothetical protein NECHADRAFT_79503 [Nectria haematococca mpVI
           77-13-4]
 gi|256726499|gb|EEU39860.1| hypothetical protein NECHADRAFT_79503 [Nectria haematococca mpVI
           77-13-4]
          Length = 350

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 76/219 (34%), Gaps = 13/219 (5%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V+ RD  N +     ++       +S + + +A      E+  R+ + D +      R+
Sbjct: 132 TVLLRDFTNGKTSVELKEAKGEPVAWSHDGRVIAV----GEERNRIGVWDVKNGHRVGRV 187

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPD 312
            +    +    F  +    L+++ +D  + I +  +    T RL  +      + + SPD
Sbjct: 188 LSHIDAVTHAAFMPDHS--LVTISRDGTLRI-TNPVTCKTTRRLEIDGSTNPRALAVSPD 244

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +IV  S       +++  +N      ++  + +  +    S           +   F 
Sbjct: 245 GRRIV--SVWGTSVHIWMPLANDLTSYNLNSVRCSEGWPLAISSDCRY--MLCRTEAGFD 300

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           I  +     +     E+  + +  +S  G  L+  R   
Sbjct: 301 IMDVATGTVEFERTTEE-LVMSGAFSEDGTELVLGRMDG 338



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 56/165 (33%), Gaps = 16/165 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI------LAP-RFSSNGKR 271
           F+PN  ++A        +              +   N ++ +        P  +S +G+ 
Sbjct: 104 FAPNTARLATIRDWIVQLPGGVDFHHASTVLLRDFTNGKTSVELKEAKGEPVAWSHDGRV 163

Query: 272 ALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             +  +++    I   D+++     R+ + +     A++ PD S +     R+G  ++  
Sbjct: 164 IAVGEERN---RIGVWDVKNGHRVGRVLSHIDAVTHAAFMPDHSLV--TISRDGTLRI-T 217

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                   +R+  D   +      SP G  I      G    I +
Sbjct: 218 NPVTCKTTRRLEIDGSTNPRALAVSPDGRRIV--SVWGTSVHIWM 260


>gi|124007678|ref|ZP_01692381.1| OmpA family protein [Microscilla marina ATCC 23134]
 gi|123986800|gb|EAY26572.1| OmpA family protein [Microscilla marina ATCC 23134]
          Length = 705

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 84/255 (32%), Gaps = 38/255 (14%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNF 256
           +NI     ++  + + P  S N + + + + ++E     +    L D      P+ + + 
Sbjct: 13  SNIGDPINTKRYVEYAPTLSTNGKTLIFQSNNNEERHWKLYESTLNDEGKWSPPQALSSI 72

Query: 257 RSM------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLT-----NTLFI 303
            +       +  P  S N                    +++  T  E ++     N+   
Sbjct: 73  NNYQGGAHYVAGPSLSKNADTLYFCASYTTDNRDIYYSIKNGNTWGEPISIGSPVNSDQY 132

Query: 304 NISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
               S + D   + F   D  G+ + Y         KR +  K    +       G    
Sbjct: 133 EGFPSIAADGMSLYFMRRDTTGEVKNYK-------AKRKNPLKNKDPYHIKVGEDGK--- 182

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVE-------DSNLQAPTWSPSGRSLIFSR-KKDGDT 414
            TK+ G  + + V  K  +      E       +   + P   P   +LIFS  +K G  
Sbjct: 183 ITKYKGICYVLYVSHKGTNGTWQTPEALPNVINNGCEKCPRIMPDNATLIFSSIRKGGKG 242

Query: 415 GSKLY--SIDLNGRN 427
              LY  ++DL G+ 
Sbjct: 243 NFDLYVSTLDLTGKW 257


>gi|91088693|ref|XP_975005.1| PREDICTED: similar to wd-repeat protein [Tribolium castaneum]
          Length = 613

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 71/220 (32%), Gaps = 14/220 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   ++SP+   +A  + D    +R++    +              I    +
Sbjct: 64  VYTEHSCPVNVAKYSPSGFYIA--SGDQSGKVRIWDTVNKEHILKNEFHPIGGPIKDIAW 121

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S + +R ++  +  E      +     +   ++       S  + P     +     +  
Sbjct: 122 SPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPTRPFRIITGSED-- 179

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER- 384
             + V +      K   Q+         +SP G+L A   F G+ F   +     S    
Sbjct: 180 NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPTGNLFASAGFDGKVF---LYDGTSSDLVG 236

Query: 385 ---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                     +   +WSP G+ L+ +    GD  +KL+ +
Sbjct: 237 EVGSPAHSGGVYGVSWSPDGKQLLTAS---GDKTAKLWDV 273



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 41/210 (19%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS----------SPASWR---------KI 154
           G  I  G    +V  R+WD  +++ I+  +F            SP + R         + 
Sbjct: 81  GFYIASGDQSGKV--RIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERF 138

Query: 155 AHTISDDIYQSITGEKG--------DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
            H    +   S+    G        DF     F    +++G   N++ V +      +  
Sbjct: 139 GHVFMSETGTSVGEISGQSKPINSCDFKPTRPF---RIITGSEDNTIAVFEGPPFKFKMT 195

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPR 264
                + +   R+SP     A A +D +    V+L D         +G+      +    
Sbjct: 196 KQEHSRFVQAVRYSPTGNLFASAGFDGK----VFLYDGTSSDLVGEVGSPAHSGGVYGVS 251

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +S +GK+ L +   D+   ++  D+++   
Sbjct: 252 WSPDGKQLL-TASGDKTAKLW--DVETRQV 278


>gi|29349601|ref|NP_813104.1| dipeptidyl peptidase IV [Bacteroides thetaiotaomicron VPI-5482]
 gi|253570031|ref|ZP_04847440.1| dipeptidyl peptidase IV [Bacteroides sp. 1_1_6]
 gi|29341511|gb|AAO79298.1| dipeptidyl peptidase IV [Bacteroides thetaiotaomicron VPI-5482]
 gi|251840412|gb|EES68494.1| dipeptidyl peptidase IV [Bacteroides sp. 1_1_6]
          Length = 736

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 52/154 (33%), Gaps = 29/154 (18%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI-------- 361
           + D +QI+  S R G++   +   N     +  +    ++    +SP GD +        
Sbjct: 56  NADGTQIIKYSFRTGEKVEVIFDVN-----QARECDFKNFDSYQFSPDGDKLLIATKTTP 110

Query: 362 AFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +         I  +K++            L +    Q P +SP G  + F R  +    
Sbjct: 111 IYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQVPVFSPDGTMIAFVRDNNIFLV 170

Query: 416 SKLYSIDLNGRNETLINTPAYASD-----PQWVG 444
             LY     G +E+ +      +      P WV 
Sbjct: 171 KLLY-----GNSESQVTEDGKQNMVLNGIPDWVY 199



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 78/250 (31%), Gaps = 54/250 (21%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F     ++ +  I  PD       +  + A      +      +++ V   
Sbjct: 26  DLKDITSGRFRP---ENIQGVIPTPDGEH----YTQMNADGTQIIKYSFRTGEKVEV--- 75

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             ++  +    
Sbjct: 76  IFDVNQARECDFKNFDSYQFSPDGDKLLIATKTTPIYRHSYT-----AVHYIYPLKRNDK 130

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   +A+   ++     ++L+    
Sbjct: 131 GVTTNNIIERLSDGGPQQV-----------PVFSPDGTMIAFVRDNN-----IFLVKLLY 174

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +  ++                          A  FS++          +  +  YS  
Sbjct: 175 GNSESQVTEDGKQNMVLNGIPDWVYEEEFGFNRALEFSADNTMIAFIRFDESEVPSYSFP 234

Query: 289 LQSNATERLT 298
           + +    ++T
Sbjct: 235 MFAGEAPQIT 244



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 49/159 (30%), Gaps = 34/159 (21%)

Query: 219 FSPNQQKVA------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           FSP+  K+             Y        L+        +   +R+ +     + P FS
Sbjct: 95  FSPDGDKLLIATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQV-PVFS 153

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------------------FINISAS 308
            +G        +D  + +  + L  N+  ++T                       N +  
Sbjct: 154 PDGTMIAFV--RDNNIFLVKL-LYGNSESQVTEDGKQNMVLNGIPDWVYEEEFGFNRALE 210

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +S D++ I F    E +   Y       +  +I+  K+ 
Sbjct: 211 FSADNTMIAFIRFDESEVPSYSFPMFAGEAPQITPLKDY 249


>gi|332709217|ref|ZP_08429183.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332352026|gb|EGJ31600.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1261

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/253 (16%), Positives = 92/253 (36%), Gaps = 45/253 (17%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            RLWD+   +    K         +                    F+     ++ + + GI
Sbjct: 1021 RLWDINTGQVQKLKGHRGLVQQLQ--------------------FSRDGQLLASAGLDGI 1060

Query: 189  IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            ++    V D +   ++ L   R   +++   S + Q +A A  D   I+RV+ + TR   
Sbjct: 1061 VR----VWDLNTGQVQDLKAHR-GWVWQMALSWDGQLLASAGLD--GIMRVWNIKTR--- 1110

Query: 249  APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              + +   +  +    FS +  + L S   +  + ++  D+ +   +  T+         
Sbjct: 1111 QVEELKGHQGRVYQVEFSWD-SQLLASAGVNGIVRLW--DVNTGQVQAFTDNHSKVDQVE 1167

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            +SPD   +   + R+   +L+     G   ++I+Q +       V+ P G  +A     G
Sbjct: 1168 FSPDGQLLA-SAGRDRTVRLW--DLAG---RQIAQFEGTRL---VFHPDGTQLA--TIDG 1216

Query: 369  EKFAIGVMK-KDG 380
                +  +   DG
Sbjct: 1217 YTIKLWRVDTLDG 1229


>gi|301167558|emb|CBW27141.1| putative peptidase [Bacteriovorax marinus SJ]
          Length = 645

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/178 (11%), Positives = 54/178 (30%), Gaps = 8/178 (4%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            + +G+    +        ++ ++       ++T     +  +  + D   ++   D  G
Sbjct: 68  LAPDGRTMFFTWGVTGVRQVWKINGPKKFPIQMTGGENASSLSDITNDGKYLLISRDEGG 127

Query: 325 --KEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKD 379
                LY+  +  G +  +I   K+        S  G  I +         + I      
Sbjct: 128 DEYPSLYLQDAKRGGELFKIFGQKKVKVSYLDQSEDGKFIYYRANDITPTTWGIYKYNIA 187

Query: 380 GSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             +  L+ +         +  +G  L+      G+   + Y  DL  + +  +     
Sbjct: 188 TKKRELIFKGEGYWWIVEFFKNGNILL--GHATGNIAREFYIYDLKTKEKRALLGVGE 243


>gi|265752774|ref|ZP_06088343.1| peptidase [Bacteroides sp. 3_1_33FAA]
 gi|263235960|gb|EEZ21455.1| peptidase [Bacteroides sp. 3_1_33FAA]
          Length = 747

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 69/210 (32%), Gaps = 57/210 (27%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISASYSPDSSQIVF 318
           P  S +GK         +  +IY  ++ +   ++L    T   + +    +SPDS ++  
Sbjct: 165 PVPSPDGKWIAFI----KNQNIYVKEMATGKEKQLSLDGTLGNYYSAYIRWSPDSKKVAS 220

Query: 319 ESDREGKEQLYVMQSNGSDQKRI------------------------------------- 341
              R  +++ YV     S   ++                                     
Sbjct: 221 CKIRPVEKR-YVYYVESSPADQLQPKLHKQEYAKPGDELPFKVPCIYGVENGRAIIPSTE 279

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV--MKKDGSQERLLVEDSNLQAPTWS- 398
             D++   + P W+     + F           V  +  +  + R LVE+++ +   ++ 
Sbjct: 280 LFDRQYEVYGPEWNSDSRAVTFEYNQRGHQVYRVLELSAETGKVRPLVEETSDKYVNYTR 339

Query: 399 ------PSGRSLIFSRKKDGDTGSKLYSID 422
                   G+ +I+  ++D    + LY  D
Sbjct: 340 RFRYDLKDGKRMIWMSERDN--WNHLYMYD 367



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/239 (10%), Positives = 68/239 (28%), Gaps = 50/239 (20%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVY----------------------------- 240
            +      R+SP+ +KVA       +   VY                             
Sbjct: 202 GNYYSAYIRWSPDSKKVASCKIRPVEKRYVYYVESSPADQLQPKLHKQEYAKPGDELPFK 261

Query: 241 ------LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSN 292
                 + + R       + + +  +  P ++S+ +       +       +  +  ++ 
Sbjct: 262 VPCIYGVENGRAIIPSTELFDRQYEVYGPEWNSDSRAVTFEYNQRGHQVYRVLELSAETG 321

Query: 293 ATERL---TNTLFINISASYS---PDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDK 345
               L   T+  ++N +  +     D  ++++ S+R+    LY+     +    +I++ +
Sbjct: 322 KVRPLVEETSDKYVNYTRRFRYDLKDGKRMIWMSERDNWNHLYMYDRVSAQPDYQITKGE 381

Query: 346 EASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                          + F+                 +  DG     L  +  +    +S
Sbjct: 382 WYVREVLRVDEDNRQVYFSANGMEAGEDPYLIRYYRIGLDGKGLTCLTPEEGMHKAVFS 440



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 9/76 (11%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD---KEASYFDPVWSPQGDLI 361
                SPD   I F       + +YV +     +K++S D            WSP    +
Sbjct: 163 AEPVPSPDGKWIAFIK----NQNIYVKEMATGKEKQLSLDGTLGNYYSAYIRWSPDSKKV 218

Query: 362 AFTKFSG--EKFAIGV 375
           A  K     +++   V
Sbjct: 219 ASCKIRPVEKRYVYYV 234


>gi|182416344|ref|YP_001821410.1| hypothetical protein Oter_4539 [Opitutus terrae PB90-1]
 gi|177843558|gb|ACB77810.1| hypothetical protein Oter_4539 [Opitutus terrae PB90-1]
          Length = 346

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/251 (15%), Positives = 72/251 (28%), Gaps = 38/251 (15%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +          + +  + V        L V+D+ G         R      P  S  + 
Sbjct: 95  YLANGDILLAGPLAYDLKDVNHARRNCYLFVLDKSGRKPPVPLGIRCN--EGPAVSRQRL 152

Query: 225 KVAYATYDDEDILR-------------VYLMDTRIDRAPKRIGNFRSMILAPRF------ 265
             A+  + D                  VY          + I + + +            
Sbjct: 153 HFAWPEWIDPKPGEGNLSTSTMVEADLVYTDGVPAIANKRLILDGKDLPFRATMETQNYR 212

Query: 266 SSNGKRALISVQKDEAM--DIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDR 322
               K  + S   D     D+Y ++L +      TN+  I        PD    + E D 
Sbjct: 213 PPEEKELIFSTYTDGGQKCDVYGIELATRKLTAYTNSPDIYDEPEGIFPDGRHTLVECDS 272

Query: 323 E-----GKEQLYVMQSNGSDQ-KRISQDKEAS---YFDPVWSPQGDLIAF-----TKFSG 368
           +     G   L+ +  +G+    R++   + +     + V S  G  +AF      + +G
Sbjct: 273 QNKRGPGSIDLWKLALDGTGTYTRLTHFSDYAGYKASNGVVSDDGRHVAFQMGKAGEAAG 332

Query: 369 EKFAIGVMKKD 379
               I V+   
Sbjct: 333 IGHGIFVLDLT 343


>gi|281202225|gb|EFA76430.1| hypothetical protein PPL_10195 [Polysphondylium pallidum PN500]
          Length = 407

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 71/207 (34%), Gaps = 23/207 (11%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRALIS 275
           SPN   +   + D         +        K +  F  +  AP     FS      L++
Sbjct: 115 SPNCNIIVTGSTDK-------TIKVTDFITQKVLYTFSEISHAPFISLDFSPIDPELLLA 167

Query: 276 VQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
              D +  +  ++  +      ++  + +   +   +SP+  +    S  +  +     Q
Sbjct: 168 SSVDGSTSLLRINSTTGEGEVVQQFKDHVKYVVRVRWSPNGDRFATCSYDKTLKYYQRDQ 227

Query: 333 SNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            + S    + S +   S    +++P  + I  T      +   V   DGS E+  +  + 
Sbjct: 228 QDTSKFVLVNSIEFPFSLESLIFTPDSERII-TACRESNYIQYVSFADGSIEKFNMNANG 286

Query: 392 LQAPTW-------SPSGRSLIFSRKKD 411
               ++       SP+ + L+ S  ++
Sbjct: 287 DDHVSFSAMEFGISPNKKYLLVSTDRN 313


>gi|195393658|ref|XP_002055470.1| GJ19389 [Drosophila virilis]
 gi|194149980|gb|EDW65671.1| GJ19389 [Drosophila virilis]
          Length = 470

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 4/101 (3%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++ D + +   S   G   + +   +    K + +          WSP  + I F     
Sbjct: 243 WNKDGTLLATASI--GDRAILIWHPDSKRLKPLKRLGPPGSLL-SWSPCNEWI-FAATVD 298

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             F +       + +R + +  N+QA  WSP GR L+F+  
Sbjct: 299 RVFRVWKCHDRWTSDRWVCDGGNVQAACWSPYGRFLLFAST 339


>gi|194890545|ref|XP_001977336.1| GG18308 [Drosophila erecta]
 gi|190648985|gb|EDV46263.1| GG18308 [Drosophila erecta]
          Length = 468

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 36/112 (32%), Gaps = 17/112 (15%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  ++ D +Q+   S   G   + + Q +    + + +          WSP  D + F 
Sbjct: 237 TSLQWNKDGTQLATASI--GDRSIIIWQPDNGRMQPLKRLGPPGSLLK-WSPDNDWL-FA 292

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-------TWSPSGRSLIFSRK 409
                 F +          +    D  +  P        WSP GR L+F   
Sbjct: 293 ATVDRVFRVWNCH------QQWTTDRWVCGPGGHVQTACWSPCGRFLLFVSS 338


>gi|157960410|ref|YP_001500444.1| WD40 domain-containing protein [Shewanella pealeana ATCC 700345]
 gi|157845410|gb|ABV85909.1| WD40 domain protein beta Propeller [Shewanella pealeana ATCC
           700345]
          Length = 309

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 5/81 (6%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVM 331
           + S+  D+    +S+       + +T     +   S+SPDS  ++F SDR + +  +Y  
Sbjct: 35  IYSLDYDDTSQQWSL----GEAKAVTERDGYDNQPSFSPDSQNLLFTSDRIDAQNDIYQY 90

Query: 332 QSNGSDQKRISQDKEASYFDP 352
           +       +++   + S + P
Sbjct: 91  RLTDGTLSQLTFTPKQSEYSP 111



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 12/82 (14%)

Query: 364 TKFSGEKFAIGVMKKD----------GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +      F I +   D          G  + +   D     P++SP  ++L+F+  +  D
Sbjct: 24  SSIQAAGFDIWIYSLDYDDTSQQWSLGEAKAVTERDGYDNQPSFSPDSQNLLFTSDRI-D 82

Query: 414 TGSKLYSIDL-NGRNETLINTP 434
             + +Y   L +G    L  TP
Sbjct: 83  AQNDIYQYRLTDGTLSQLTFTP 104



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 6/105 (5%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY------LTPSRDQILFEPRFSPNQQK 225
            F + +LF+  S+ +      +  +D D  + ++          RD    +P FSP+ Q 
Sbjct: 14  AFLASLLFIPSSIQAAGFDIWIYSLDYDDTSQQWSLGEAKAVTERDGYDNQPSFSPDSQN 73

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           + + +   +    +Y          +     +    +P+  +NG 
Sbjct: 74  LLFTSDRIDAQNDIYQYRLTDGTLSQLTFTPKQSEYSPQAFTNGT 118


>gi|77361928|ref|YP_341502.1| dipeptidyl-peptidase IV [Pseudoalteromonas haloplanktis TAC125]
 gi|76876839|emb|CAI89056.1| Dipeptidyl-peptidase IV [Pseudoalteromonas haloplanktis TAC125]
          Length = 777

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/312 (13%), Positives = 107/312 (34%), Gaps = 54/312 (17%)

Query: 174 NSRILFVSESVV--SGIIKNSLCVMDRDGA------NIRYLTPSRDQILFEPRFSPNQQK 225
           +S++ +V ++ +    +  N++  +  DG+      N  ++      I     +SP+ + 
Sbjct: 193 SSKVAYVRDNNIYMQAVGSNTVSALTTDGSATTVNGNFDWVYEEEFSIRDGFSWSPDNKS 252

Query: 226 VAYATYDDEDILRVYLMDTRIDRAP----------------------------KRIGNFR 257
           +AY   D   +    +++      P                             R     
Sbjct: 253 IAYWQLDTSGVKYFTMINNTKALYPSLTEFPYPKAGETNSAVRVGVVSLSDKQTRWAKLE 312

Query: 258 SMILA---PR--FSSNGKRALI-SVQKDEAM-DIYSVDLQSNATERLT---NTLFINI-- 305
                   PR  ++ +G+  LI  + + +   +++  + Q     ++    +  FI    
Sbjct: 313 GDNRDRYIPRISWAGDGESLLIQDLNRPQNHNNLWLFNWQKQQLTKILAEKDDAFIEWFY 372

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           SA++S      ++ S+R+G   LY +  +G     ++            +   +++ F+ 
Sbjct: 373 SANWSKSGEFFIWHSERDGWRHLYRISRDGKKIIDLTPGDYDIVDMLAINEDKNVLYFSA 432

Query: 366 FSGEKFAIGVMKK--DGSQ--ERLLVEDSN-LQAPTWSPSGRSLIFSRKK-DGDTGSKLY 419
              +     + +   DGS    R+  E  N   +   S      + +  K +     ++ 
Sbjct: 433 SPDDAAQRYLYRTAIDGSSKPVRVTPEQFNGSNSYYVSKDASWAMHTYSKFNQPAVKQII 492

Query: 420 SIDLNGRNETLI 431
            +  +   +TL+
Sbjct: 493 KVSDHSNVKTLV 504



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 40/275 (14%), Positives = 79/275 (28%), Gaps = 54/275 (19%)

Query: 214 LFEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRAPKRIGNFR-------SMILA 262
           L   +FSP+  KVAY      Y            T    A    GNF        S+   
Sbjct: 184 LMFAKFSPDSSKVAYVRDNNIYMQAVGSNTVSALTTDGSATTVNGNFDWVYEEEFSIRDG 243

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINIS--------------- 306
             +S + K           +  +++   + A    LT   +                   
Sbjct: 244 FSWSPDNKSIAYWQLDTSGVKYFTMINNTKALYPSLTEFPYPKAGETNSAVRVGVVSLSD 303

Query: 307 -----------------A--SYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDK 345
                               S++ D   ++ +  +  +    L++         +I  +K
Sbjct: 304 KQTRWAKLEGDNRDRYIPRISWAGDGESLLIQDLNRPQNHNNLWLFNWQKQQLTKILAEK 363

Query: 346 EAS----YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           + +    ++   WS  G+   +         +  + +DG +   L           + + 
Sbjct: 364 DDAFIEWFYSANWSKSGEFFIWHSERDGWRHLYRISRDGKKIIDLTPGDYDIVDMLAINE 423

Query: 402 RS--LIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               L FS   D      LY   ++G ++ +  TP
Sbjct: 424 DKNVLYFSASPDDAAQRYLYRTAIDGSSKPVRVTP 458


>gi|115469236|ref|NP_001058217.1| Os06g0649500 [Oryza sativa Japonica Group]
 gi|51534976|dbj|BAD38100.1| putative TAF5 [Oryza sativa Japonica Group]
 gi|51535441|dbj|BAD37340.1| putative TAF5 [Oryza sativa Japonica Group]
 gi|113596257|dbj|BAF20131.1| Os06g0649500 [Oryza sativa Japonica Group]
 gi|222635994|gb|EEE66126.1| hypothetical protein OsJ_22170 [Oryza sativa Japonica Group]
          Length = 654

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 65/228 (28%), Gaps = 21/228 (9%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S    +G+ +         G     L       ++   FSP    +            + 
Sbjct: 376 SPQGENGLSQGERTSASDYGKRPYTLFQGHSGPVYSAAFSPFGDFL----LSSSSDSTIR 431

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L  T+++            +   +FS  G     S   D    I+S+D       R+   
Sbjct: 432 LWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFA-SASHDRTARIWSMDKI--QPLRIMAG 488

Query: 301 LFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              ++    +  + + I   S     + + +      +  R+     +       SP G 
Sbjct: 489 HLSDVDCVQWHVNCNYIATGSS---DKTVRLWDVQTGECIRMFIGHRSMVLSLAMSPDGR 545

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            +A     G      +M  D S  R +       +  WS     L +S
Sbjct: 546 YMASGDEDGT-----IMMWDLSSGRCVSPLGGHSSCVWS-----LAYS 583



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 8/150 (5%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            ++ +   V     S     +  +   D      +       +   ++  N   +A  + 
Sbjct: 451 VWDVQFSPVGHYFASASHDRTARIWSMDKIQPLRIMAGHLSDVDCVQWHVNCNYIATGSS 510

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D      V L D +     +     RSM+L+   S +G+    S  +D  + ++  DL S
Sbjct: 511 DK----TVRLWDVQTGECIRMFIGHRSMVLSLAMSPDGRYMA-SGDEDGTIMMW--DLSS 563

Query: 292 NA-TERLTNTLFINISASYSPDSSQIVFES 320
                 L        S +YS + + +   S
Sbjct: 564 GRCVSPLGGHSSCVWSLAYSCEGALLASGS 593


>gi|328848926|gb|EGF98119.1| hypothetical protein MELLADRAFT_96153 [Melampsora larici-populina
           98AG31]
          Length = 665

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/255 (15%), Positives = 83/255 (32%), Gaps = 33/255 (12%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +   S+++ +    L  +  DG  +R       + + +  F+ + ++   A YD     +
Sbjct: 388 YCRLSILTSLNYAQLWDVYHDGKCLRTFM-GHSKAVRDVTFANDGKRFLSAAYDR----Q 442

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEAMDIYSVDLQSNATER 296
           + L DT      +   N + +    +F  +   +   ++   D    I   D++S    +
Sbjct: 443 IKLWDTETGHCVQAFSNGK-IPYCVKFHPDPEKQHIFLAGMSD--KKIIQYDMRSGDITQ 499

Query: 297 -LTNTLFINISASYSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                L    + ++  ++ + V  SD    R     + V+       K I++    S   
Sbjct: 500 EYDQHLGPVNTITFVDENRRFVTTSDDKTIRAWDFDIPVV------IKYIAEPAMHSMPA 553

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDG----SQERLLVED--SNLQAPTWSPSGRSLI 405
               P    +A          I +   D      ++R              +SP GR   
Sbjct: 554 VGIHPNNKWLAMQSLDN---QILIYSSDSFKQNRKKRFAGHTIAGYACEVGFSPDGR--- 607

Query: 406 FSRKKDGDTGSKLYS 420
           F    DG+     + 
Sbjct: 608 FLSSGDGNGNMVFWD 622


>gi|218198661|gb|EEC81088.1| hypothetical protein OsI_23915 [Oryza sativa Indica Group]
          Length = 654

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 65/228 (28%), Gaps = 21/228 (9%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S    +G+ +         G     L       ++   FSP    +            + 
Sbjct: 376 SPQGENGLSQGERTSASDYGKRPYTLFQGHSGPVYSAAFSPFGDFL----LSSSSDSTIR 431

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L  T+++            +   +FS  G     S   D    I+S+D       R+   
Sbjct: 432 LWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFA-SASHDRTARIWSMDKI--QPLRIMAG 488

Query: 301 LFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              ++    +  + + I   S     + + +      +  R+     +       SP G 
Sbjct: 489 HLSDVDCVQWHVNCNYIATGSS---DKTVRLWDVQTGECIRMFIGHRSMVLSLAMSPDGR 545

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            +A     G      +M  D S  R +       +  WS     L +S
Sbjct: 546 YMASGDEDGT-----IMMWDLSSGRCVSPLGGHSSCVWS-----LAYS 583



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 8/150 (5%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            ++ +   V     S     +  +   D      +       +   ++  N   +A  + 
Sbjct: 451 VWDVQFSPVGHYFASASHDRTARIWSMDKIQPLRIMAGHLSDVDCVQWHVNCNYIATGSS 510

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D      V L D +     +     RSM+L+   S +G+    S  +D  + ++  DL S
Sbjct: 511 DK----TVRLWDVQTGECIRMFIGHRSMVLSLAMSPDGRYMA-SGDEDGTIMMW--DLSS 563

Query: 292 NA-TERLTNTLFINISASYSPDSSQIVFES 320
                 L        S +YS + + +   S
Sbjct: 564 GRCVSPLGGHSSCVWSLAYSCEGALLASGS 593


>gi|254464010|ref|ZP_05077421.1| transcriptional regulator, sarp family [Rhodobacterales bacterium
           Y4I]
 gi|206684918|gb|EDZ45400.1| transcriptional regulator, sarp family [Rhodobacterales bacterium
           Y4I]
          Length = 552

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 9/108 (8%)

Query: 50  IAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW 103
           IA   F       +   LG  +SE +S+ L RS  F++        +  +P+++   +  
Sbjct: 160 IAVLPFVHRSPGAADAPLGSLMSEELSRHLSRSWAFSV--TSYLASRQFDPETVRPAEVS 217

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
           +  G   L++G V  +G  R R E  L D    K I  + F  S +S 
Sbjct: 218 SVAGVDYLISGTVTSDG-GRFRAEIDLHDAVREKVIWSRSFEGSKSSL 264


>gi|297195029|ref|ZP_06912427.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297152593|gb|EFH31865.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 342

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/251 (13%), Positives = 80/251 (31%), Gaps = 33/251 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           RF                  R Y +         R      +    R S++G+    ++ 
Sbjct: 95  RFHAAGGTALCLQRRPGVPPRAYAVVLDRRLRETRRIALPGIPDRARVSASGRMLSWTMF 154

Query: 278 KDE--------AMDIYSVDLQS----NATERLT------NTLFINIS---ASYSPDSSQI 316
                      +     +DL++       E++            +++    +++ D ++ 
Sbjct: 155 AVGDSYAGSSFSTRTSILDLRTDYLIKNMEQIPLTIDGRRYHAPDVNYWGVTFARDDNRF 214

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-----F 371
                 +G+  L          + + ++ E     P  SP    IAF K  G       +
Sbjct: 215 YATVSSKGRTHLVEGDMRAWSARALRENVE----CPSLSPDNGRIAFKKKIGGGDRARPW 270

Query: 372 AIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            + V+     +E  L E         W     ++ ++  ++   G+ ++++  +G     
Sbjct: 271 RLYVLDLKTMREHPLAETRGVDDQAAWL-DDDTIAYALPREDGRGTDIWTVPADGTGRPR 329

Query: 431 INTPAYASDPQ 441
           ++  A+AS P 
Sbjct: 330 LHV-AWASSPT 339


>gi|291448498|ref|ZP_06587888.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291351445|gb|EFE78349.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 947

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 54/325 (16%), Positives = 117/325 (36%), Gaps = 39/325 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH-------------TISD 160
           GR++ EG +   V  R+WD+ DR++        + ++ R +A               ++ 
Sbjct: 353 GRLLAEGGNTGEV--RIWDLSDRRKPRRLSSVWTLSTVRDLAFDESASVLVVGSGTRVAA 410

Query: 161 DIYQSITGEKGDFNSRILFVSESVVS-----------GIIKNSLCVMDRDGANIRYLTPS 209
              +     +    S  + VS    +           G   + + V+   G+       +
Sbjct: 411 VDVRDPARPRVTGVSSGVTVSLGSGTAISGDGTLIATGAADDKVRVLRVSGSGELSTLTT 470

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSN 268
            D       FSP+   +A  T  ++  +R++ M       P+   +  S  + +  FS++
Sbjct: 471 IDAPSAAVSFSPSGHLLA--TAGEDRTVRLWDMARPRRPEPRTALHSPSESVRSVAFSAD 528

Query: 269 GKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVF-----ESD 321
           G+    +   + ++ ++ V    +    E L    F+  S ++SPD   +        S+
Sbjct: 529 GRTLA-TGDTEGSVHLWDVSDPFRPRQGETLDGHTFVVNSLAFSPDGRTLASAAWDTVSE 587

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                 + +   +G+ +             P  ++P G  +  T   G  + +  + +  
Sbjct: 588 ELSDNTVRLWNVHGARRSSAHVFLPGDGLSPQPFAPTGG-VVVTGRPGAIWKVDGVPEPR 646

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI 405
               L    S  Q  ++SP GR+L 
Sbjct: 647 RLATLPSFRSGGQDYSFSPDGRTLA 671



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 12/185 (6%)

Query: 269 GKRALISVQKDE-AMDIYSVDLQSNATERLTN--TLFINISASYSPDSSQIVFESDREGK 325
           G RALI+  +D  A+ ++ V        R T     +   S + + D   + F  D  G 
Sbjct: 758 GDRALIASVRDRKAVQLWDVGRPDRPVRRGTVPVGPWRTGSLATTADGGTL-FVGDARGG 816

Query: 326 EQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +  +    +   SQ    +       P G+++A    +     +  +        
Sbjct: 817 MTAWDITDARRPKRLGASQRHSGAITRLAADPVGNMLAGVDENSGSVRLWDVADPSVPRE 876

Query: 385 LLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           + +       P+   +SP G  L  S     D G++L+  D+    + L    A  ++ Q
Sbjct: 877 IALLAGTGTRPSGLAFSPDGGLLAVSS----DDGTQLWRTDVGPILQQLCAQSAPITEAQ 932

Query: 442 WVGFM 446
           W  ++
Sbjct: 933 WKEYL 937



 Score = 36.9 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 48/159 (30%), Gaps = 15/159 (9%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVS---GIIKNSLCVMDR-DGANIRYL--TPSRDQI 213
           D   +  T   G + +  L  +    +   G  +  +   D  D    + L  +      
Sbjct: 781 DRPVRRGTVPVGPWRTGSLATTADGGTLFVGDARGGMTAWDITDARRPKRLGASQRHSGA 840

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGK 270
           +      P    +A     DE+   V L D      P+ I         P    FS +G 
Sbjct: 841 ITRLAADPVGNMLAGV---DENSGSVRLWDVADPSVPREIALLAGTGTRPSGLAFSPDGG 897

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              +S   D+   ++  D+     ++L         A +
Sbjct: 898 LLAVSS--DDGTQLWRTDV-GPILQQLCAQSAPITEAQW 933


>gi|283781697|ref|YP_003372452.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Pirellula staleyi DSM 6068]
 gi|283440150|gb|ADB18592.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Pirellula staleyi DSM 6068]
          Length = 670

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 80/227 (35%), Gaps = 17/227 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS---NGKRALIS 275
           + P  +              V L         +    F    ++  F     +G+  ++ 
Sbjct: 81  WDPEGKG---MLIRTRFGNSVQLHRVYEPGGRREQVTFFDEPVSGMFLPETLSGQMLVLM 137

Query: 276 VQK-DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-REGKE-QLYVMQ 332
            +  +E   IY     S     LT+    N   +   D ++++F S+ R G++  LY+M 
Sbjct: 138 DEGGNENDQIYLHSKASPLPTLLTDGKSRNQLGAVRRDGTRLIFGSNKRNGRDTDLYLMN 197

Query: 333 S-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLV--- 387
                  K + +     +    WS  G  +   K+ S  +    ++  +  ++ +L    
Sbjct: 198 PLAPQSTKMVLEVNGEFWSAVDWSEDGSQLLLIKYVSANESYPAILDIESGEKVMLPLPE 257

Query: 388 EDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
           E      P  +S  G+ +I      G   SKL  +DL   + E L +
Sbjct: 258 EGIAHVGPIGFSHDGKQVI-MATDSGSEFSKLMLLDLQTKKFEKLTD 303



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 84/252 (33%), Gaps = 19/252 (7%)

Query: 124 LRVEFRLWDVKD----RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN-SRIL 178
           L V    W   D      Q++  K+ S+  S+  I    S +       E+G  +   I 
Sbjct: 208 LEVNGEFWSAVDWSEDGSQLLLIKYVSANESYPAILDIESGEKVMLPLPEEGIAHVGPIG 267

Query: 179 F------VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN-QQKVAYATY 231
           F      V  +  SG   + L ++D        LT   D  + +           A    
Sbjct: 268 FSHDGKQVIMATDSGSEFSKLMLLDLQTKKFEKLTDDIDWDVEDLAIDHKTGTFAAVVNA 327

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQ 290
           D    + ++  +       K +     ++ +  FS + +    ++   +   D Y++ L+
Sbjct: 328 DGRSQVLLFTKNAAGKLERKELKLPLGIVSSLEFSPDSQSLGFTLAASDNPADAYALALE 387

Query: 291 SNATERLTNTL--FINISASYSPDSSQI-VFESDREGKEQLYVMQSNGSDQKRIS---QD 344
           ++   R T +    ++ S    P + ++  F+             ++GS    +      
Sbjct: 388 TDELTRWTFSEVGGLDTSKFVRPTAIRVKSFDGLEVPAWYYRPESASGSQPAPVLIMIHG 447

Query: 345 KEASYFDPVWSP 356
              S   P +SP
Sbjct: 448 GPESQSQPYFSP 459


>gi|224025585|ref|ZP_03643951.1| hypothetical protein BACCOPRO_02325 [Bacteroides coprophilus DSM
           18228]
 gi|224018821|gb|EEF76819.1| hypothetical protein BACCOPRO_02325 [Bacteroides coprophilus DSM
           18228]
          Length = 719

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 92/266 (34%), Gaps = 50/266 (18%)

Query: 219 FSPNQQKVAYATYD-------------------------------DEDILRVYLMDTRID 247
           +SP    +A+   D                                +  + VY + +   
Sbjct: 198 WSPKGNCLAFYRMDQSMVTAYPQVNTTTRIATLEPDKYPMAGMTSHKVTVGVYHIQSGKT 257

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRA-LISVQKDEA-MDIYSVDLQSNATERL----TNTL 301
              +             +S + K   +I + +D+    +   + ++ A E +    T+  
Sbjct: 258 VYLQAGDPTDRYFTNISWSPDEKSIYVIELNRDQNHSQLVRYNAETGAKEAMLFEETHPK 317

Query: 302 FINISA--SYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSP 356
           ++       + P DS+Q ++ S R+G   LY+    G   K+++Q             + 
Sbjct: 318 YVEPQHPIVFLPWDSNQFIYWSQRDGFHHLYLYNKEGQLIKQLTQGDWLVQDILGFNTAR 377

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSRKKDGDT 414
           +  +IA T+ S  +  I  +     +  LL +     +   S SG  LI  F+     + 
Sbjct: 378 KEMIIASTEISPLQTNIFSLNVKTGKRTLLGQQDGTHSARLSASGTYLIDNFTS---FNV 434

Query: 415 GSKLYSIDLNGRNETLINTPAYASDP 440
             ++  +  NG+    + T   A+DP
Sbjct: 435 PREISILPTNGKTGINLLT---ATDP 457


>gi|55981918|ref|YP_145215.1| hypothetical protein TTHA1949 [Thermus thermophilus HB8]
 gi|55773331|dbj|BAD71772.1| hypothetical protein [Thermus thermophilus HB8]
          Length = 415

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 74/214 (34%), Gaps = 18/214 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP      Y  + + +  + +++DTR D+    +   R   L    + + K+  +S   
Sbjct: 38  WSP------YVVFLNANA-KAFIVDTRTDQVVASLDTARGATLG-SMTPDAKKVYVSGAG 89

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGS 336
           +    +  +DL++    ++  T         SPD  ++  +  +   GK +L  +++   
Sbjct: 90  EGETRVVILDLENLRVAKVLETGNRPKHGLVSPDGRRVGVDHWALSGGKLRLTFIRTEDD 149

Query: 337 DQKRIS------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             +++       Q K  +     WS       F         + V+       R     S
Sbjct: 150 TIEKVLDIPVTNQPKGVTSMHNAWSWDSRY--FFSVDRVDDRLVVVDTADWSVRTFSAPS 207

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               P  SP G+ L    + +      +   DL 
Sbjct: 208 VPHYPVVSPDGKELWLVHEGNDRVRPGIAVYDLT 241



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 71/227 (31%), Gaps = 24/227 (10%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                 ++SR  F  + V          ++  D A+    T S   +   P  SP+ +++
Sbjct: 169 MHNAWSWDSRYFFSVDRVDD-------RLVVVDTADWSVRTFSAPSVPHYPVVSPDGKEL 221

Query: 227 AYATYDDEDI-LRVYLMDTRIDRAPKR-------IGNFRSMILAPRFSSNGKRALISVQK 278
                 ++ +   + + D      P         IG          F+ +G+   +++ +
Sbjct: 222 WLVHEGNDRVRPGIAVYDLTRPDLPIVAQVEMPLIGEDAVEAHHGNFTQDGRY-FMALNR 280

Query: 279 DEAMDI------YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               ++      +          RLT        A  SPD  +++  +   G   + V+ 
Sbjct: 281 GPGNNLRGREVAFFSPRTKRLVHRLTCASTGVGHAYNSPDGRRVIATNY--GNNVITVID 338

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             G    +     +      V++P G     +   G  + + +    
Sbjct: 339 LLGLRTLKDLVIGKGRMGHVVFTPDGRFAYLSNADGNLYKLDMRSLT 385


>gi|312130177|ref|YP_003997517.1| peptidase s9b dipeptidylpeptidase iv domain protein [Leadbetterella
           byssophila DSM 17132]
 gi|311906723|gb|ADQ17164.1| peptidase S9B dipeptidylpeptidase IV domain protein [Leadbetterella
           byssophila DSM 17132]
          Length = 718

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 50/365 (13%), Positives = 115/365 (31%), Gaps = 70/365 (19%)

Query: 114 GRVIKEGKDRLRVE---FRLWDVK-DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           G    +G     V+    +  D K  +K+++       P    K        +       
Sbjct: 22  GSWTPDGNGNYTVDKSGIQKTDFKTKQKEVLVPAELLVPKGQEK-------PLEVKGFSF 74

Query: 170 KGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPS-RDQILFEPRFSPNQQKVA 227
             DF+S ++F  ++ V     K     +D     ++ +        L   + SP+ + VA
Sbjct: 75  SDDFSSVLIFTNTKRVWRYETKGDYWHLDLKTKALKQVGKGLPSASLMFAKLSPDAKNVA 134

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----------------RFSSNGKR 271
           Y + ++     +Y  +    +  K++   +  +++                 R+S + K 
Sbjct: 135 YVSNNN-----LYTENLATGK-IKQLTFGKGKLISGTFDWVYEEEFDCRDGFRWSPDSKS 188

Query: 272 ALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD-SSQIVFESDREGKEQLY 329
                +  +   D Y ++         T++++        P         + R G   + 
Sbjct: 189 IAFWEIDANTIRDFYMINT--------TDSIYSYTIPVEYPKVGESP--SACRVGVVGI- 237

Query: 330 VMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERL 385
              ++G             ++ P   W+P G+ +             +           L
Sbjct: 238 ---ADGKTVWMKVPGDNRQHYIPRMDWAPSGNQLILQQLNRKQNHSKLFYANAKTGAVTL 294

Query: 386 LVED-------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           L E+              +     W    +  ++  +KDG   + +Y I  +G++ETL+ 
Sbjct: 295 LYEEQDEAWVDVRTSWAGSQGGWRWLNGNKEFLWITEKDG--WNHIYKISNDGKSETLVT 352

Query: 433 TPAYA 437
              + 
Sbjct: 353 VGDFD 357



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 72/228 (31%), Gaps = 23/228 (10%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-- 218
           D Y   T +     +  +   +   S        V   DG  +    P  ++  + PR  
Sbjct: 201 DFYMINTTDSIYSYTIPVEYPKVGESPSACRVGVVGIADGKTVWMKVPGDNRQHYIPRMD 260

Query: 219 FSPNQ--------------QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           ++P+                K+ YA      +  +Y          +   ++       R
Sbjct: 261 WAPSGNQLILQQLNRKQNHSKLFYANAKTGAVTLLYEEQDEAWVDVR--TSWAGSQGGWR 318

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
           + +  K  L   +KD    IY +     +   +T   F  IS  +   +   + + +  +
Sbjct: 319 WLNGNKEFLWITEKDGWNHIYKISNDGKSETLVTVGDFDVISPLAVDEELGYVYYLASPD 378

Query: 324 GKEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
              Q Y+ +S    G   +R++        +   SP G   A   FS 
Sbjct: 379 NATQRYLYRSKLSGGEKAERVTPAILEGTHNYQISPNGKY-AVHSFSN 425



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 77/234 (32%), Gaps = 28/234 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+SP+ + +A+   D   I   Y+++T        I      +     S +  R  +   
Sbjct: 181 RWSPDSKSIAFWEIDANTIRDFYMINTTDSIYSYTIPVEYPKVGE---SPSACRVGVVGI 237

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNG 335
            D       V   +                 ++P  +Q++ +  + ++   +L+   +  
Sbjct: 238 ADGKTVWMKVPGDNRQ--------HYIPRMDWAPSGNQLILQQLNRKQNHSKLFYANAKT 289

Query: 336 SDQKRISQDKEASYFDPVWSPQG-----------DLIAFTKFSGEKFAIGVMKKDGSQER 384
                + ++++ ++ D   S  G               +         I  +  DG  E 
Sbjct: 290 GAVTLLYEEQDEAWVDVRTSWAGSQGGWRWLNGNKEFLWITEKDGWNHIYKISNDGKSET 349

Query: 385 LLV-EDSNLQAPTWSPSGR--SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           L+   D ++ +P  +       + +    D  T   LY   L+G  +    TPA
Sbjct: 350 LVTVGDFDVISP-LAVDEELGYVYYLASPDNATQRYLYRSKLSGGEKAERVTPA 402


>gi|296424713|ref|XP_002841891.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638142|emb|CAZ86082.1| unnamed protein product [Tuber melanosporum]
          Length = 515

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 58/141 (41%), Gaps = 13/141 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           + E +V+     ++ + +   G           +++    FSP+ + +A A++D+     
Sbjct: 370 IVERLVTASDDFTMYLWEPKKGTKPVARLLGHQKLVNHVSFSPDGRLIASASFDN----H 425

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V L D R  +    +    + +    FS++  R L+S  KD  + I+  D+++      T
Sbjct: 426 VKLWDGRDGKFLHTLRGHVAPVYQCSFSAD-SRLLVSSSKDTTLKIW--DVKTGKLH--T 480

Query: 299 NTLFINISAS---YSPDSSQI 316
           +            +SPD  ++
Sbjct: 481 DLPGHQDEVFAVDWSPDGKKV 501



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 43/140 (30%), Gaps = 6/140 (4%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
             ++        D   +YL + +    P  R+   + ++    FS +G+    S   D  
Sbjct: 367 GGEIVERLVTASDDFTMYLWEPKKGTKPVARLLGHQKLVNHVSFSPDGRLIA-SASFDNH 425

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + ++           L   +      S+S DS  +V  S       L +           
Sbjct: 426 VKLWD-GRDGKFLHTLRGHVAPVYQCSFSADSRLLVSSSK---DTTLKIWDVKTGKLHTD 481

Query: 342 SQDKEASYFDPVWSPQGDLI 361
               +   F   WSP G  +
Sbjct: 482 LPGHQDEVFAVDWSPDGKKV 501



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 4/132 (3%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L++   D  M ++     +    RL     +    S+SPD   I   S       + +  
Sbjct: 374 LVTASDDFTMYLWEPKKGTKPVARLLGHQKLVNHVSFSPDGRLIASASF---DNHVKLWD 430

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +   A  +   +S    L+  +        I  +K       L      +
Sbjct: 431 GRDGKFLHTLRGHVAPVYQCSFSADSRLLV-SSSKDTTLKIWDVKTGKLHTDLPGHQDEV 489

Query: 393 QAPTWSPSGRSL 404
            A  WSP G+ +
Sbjct: 490 FAVDWSPDGKKV 501


>gi|255080236|ref|XP_002503698.1| predicted protein [Micromonas sp. RCC299]
 gi|226518965|gb|ACO64956.1| predicted protein [Micromonas sp. RCC299]
          Length = 448

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 65/192 (33%), Gaps = 14/192 (7%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P FSP+ + +A A      I     +    I     RI           +  +    L +
Sbjct: 16  PVFSPDGRFLATAVEYRLVIRDAETLTVCSISSCLDRIHKIE-------WHPDSDHVLCA 68

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             K   +  +SV      T  +       I A +SP+ + I+  ++     +  V     
Sbjct: 69  CYKRGVVQCFSVS-DEKWTCLIDEGPAGCIHARWSPNGTHILTVAEF--NVRCAVWSLLD 125

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK--KDGSQERLLVEDSNLQ 393
                + Q K A      +SP G  I   +    K  I V+      +  R  V  ++L 
Sbjct: 126 KSCVYLRQPKYADA-GIDFSPNGKFILVCERRECKDFITVVSCATWTTAARFQVATTDLA 184

Query: 394 APTWSPSGRSLI 405
             TWSP G ++ 
Sbjct: 185 DATWSPDGTAIA 196



 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 83/236 (35%), Gaps = 12/236 (5%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           + +       ++  ++  L + D +   +  ++   D+I  +  + P+   V  A Y   
Sbjct: 15  TPVFSPDGRFLATAVEYRLVIRDAETLTVCSISSCLDRI-HKIEWHPDSDHVLCACYKRG 73

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               V       ++    I    +  +  R+S NG   L   + +    ++S  L   + 
Sbjct: 74  ---VVQCFSVSDEKWTCLIDEGPAGCIHARWSPNGTHILTVAEFNVRCAVWS--LLDKSC 128

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             L    + +    +SP+   I+    RE K+ + V+           Q       D  W
Sbjct: 129 VYLRQPKYADAGIDFSPNGKFILVCERRECKDFITVVSCATWTTAARFQVATTDLADATW 188

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDS---NLQAPTWSPSGRSLI 405
           SP G  IA    +  + ++ + + DG++       +      ++   W P G  L 
Sbjct: 189 SPDGTAIA-VWDALTEHSVFIYRPDGTKLASYKPSDGGAAAGVRCAAWCPRGGLLA 243



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 59/183 (32%), Gaps = 7/183 (3%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            P FS +G+    +V+      +   D ++     +++ L       + PDS  ++    
Sbjct: 15  TPVFSPDGRFLATAVE----YRLVIRDAETLTVCSISSCLDRIHKIEWHPDSDHVLCACY 70

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           + G  Q +    +      +  +  A      WSP G  I        + A+  +  D S
Sbjct: 71  KRGVVQCF--SVSDEKWTCLIDEGPAGCIHARWSPNGTHILTVAEFNVRCAVWSL-LDKS 127

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              L           +SP+G+ ++   +++      + S                 +D  
Sbjct: 128 CVYLRQPKYADAGIDFSPNGKFILVCERRECKDFITVVSCATWTTAARFQVATTDLADAT 187

Query: 442 WVG 444
           W  
Sbjct: 188 WSP 190


>gi|159037583|ref|YP_001536836.1| peptidase S9 prolyl oligopeptidase [Salinispora arenicola CNS-205]
 gi|157916418|gb|ABV97845.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Salinispora arenicola CNS-205]
          Length = 610

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 73/239 (30%), Gaps = 28/239 (11%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS--- 220
           + +    G   + I+         +++ +L  +  DG     L     +++    F    
Sbjct: 55  KRVVSPAGFDVTSIVHAYGGGSFAVVEGTLWCVGGDGLYRSSLHRDEPEMVSGGCFGDLT 114

Query: 221 -PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
             N + +A    +      +    +      + + +    + APR S          ++D
Sbjct: 115 ISNGELLA--VRESGQGDELVAASSSGPPQVRTLVSSPGFLGAPRPSPGLLAWTAWSERD 172

Query: 280 EAMDIYSVDLQSNATE-------RLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVM 331
              D   V + S +         RL      + +   + PD + + F SDR G   LY  
Sbjct: 173 MPWDACEVWVASYSPRGSVEGAVRLAGGPEESAVEPQWGPDGA-LYFVSDRNGWWNLYRW 231

Query: 332 Q---------SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                       G       +   ASY        G  I      G +  + V++  GS
Sbjct: 232 DGHRVEAVAPLAGECAADPWELGYASYGFL----DGGRIVIAVQEGPRHRLVVVEASGS 286


>gi|19075884|ref|NP_588384.1| notchless-like protein [Schizosaccharomyces pombe 972h-]
 gi|74676120|sp|O74855|YQ95_SCHPO RecName: Full=Uncharacterized WD repeat-containing protein C18.05c
 gi|3766367|emb|CAA21419.1| notchless-like protein [Schizosaccharomyces pombe]
          Length = 502

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 48/116 (41%), Gaps = 8/116 (6%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                    +++    FSP+ + +A A++D      V L D +  +    +    + +  
Sbjct: 381 PITKMHGHQKVVNHASFSPDGRCIATASFDS----SVRLWDGKTGKFLATLRGHVAAVYQ 436

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIV 317
             +S++  R L+S  +D  + ++  D++S   +  L        +  +SPD  ++ 
Sbjct: 437 CAWSTD-SRLLVSSSQDTTLKVW--DVRSKKMKFDLPGHEDQVFAVDWSPDGQRVA 489



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 52/142 (36%), Gaps = 10/142 (7%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + +++  A+   +D+  +     +  +   ++   + ++    FS +G+    +   D +
Sbjct: 357 SGERLVSAS---DDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIA-TASFDSS 412

Query: 282 MDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + ++  D ++      L   +      ++S DS  +V  S       L V        K 
Sbjct: 413 VRLW--DGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQ---DTTLKVWDVRSKKMKF 467

Query: 341 ISQDKEASYFDPVWSPQGDLIA 362
                E   F   WSP G  +A
Sbjct: 468 DLPGHEDQVFAVDWSPDGQRVA 489



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 51/152 (33%), Gaps = 8/152 (5%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+R + S   D  + ++     +    ++     +   AS+SPD   I   S       +
Sbjct: 358 GERLV-SASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASF---DSSV 413

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +        +  ++    +  L   
Sbjct: 414 RLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLV-SSSQDTTLKVWDVRSKKMKFDLPGH 472

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +  + A  WSP G+ +        D   +++S
Sbjct: 473 EDQVFAVDWSPDGQRVA---SGGADKAVRIWS 501



 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 39/94 (41%), Gaps = 7/94 (7%)

Query: 195 VMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           V   DG   ++L         +++  +S + + +  ++ D      + + D R  +    
Sbjct: 413 VRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDT----TLKVWDVRSKKMKFD 468

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           +      + A  +S +G+R   S   D+A+ I+S
Sbjct: 469 LPGHEDQVFAVDWSPDGQRVA-SGGADKAVRIWS 501



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 89/295 (30%), Gaps = 57/295 (19%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  +V+G    +  + D D              +    ++P+   +A  + D+       
Sbjct: 147 SSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAPDASIIATGSMDNTIRFWDP 206

Query: 241 LMDTRIDRAPKRIGN------FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              + I  A +R         ++ + LAP    +G   L S  KD  + I++V L++   
Sbjct: 207 KKGSPIGDALRRHTKPIMALCWQPLHLAPD---SGPYLLASGSKDNTVRIWNVKLRT-LL 262

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             L+          +       ++ S  +  + + +  +       I +   A       
Sbjct: 263 FTLSGHTAPITCVRWG--GQNWIYSSSYD--KTIRIWDAKDGKCLHILKGHAARVNHLSL 318

Query: 355 S--------------------PQGDLIAFTKF-------------SGEKFAIGVMKKDGS 381
           S                          A  ++             + +   + +     S
Sbjct: 319 STEHVLRSGAYDHTDFKPKSFSDERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKS 378

Query: 382 QERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            + +     +   +   ++SP GR +  +     D+  +L+    +G+    + T
Sbjct: 379 TKPITKMHGHQKVVNHASFSPDGRCIATAS---FDSSVRLW----DGKTGKFLAT 426


>gi|328850542|gb|EGF99705.1| hypothetical protein MELLADRAFT_50613 [Melampsora larici-populina
           98AG31]
          Length = 631

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 93/297 (31%), Gaps = 39/297 (13%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             R+WDV   ++++     S  A     +   +D+   ++     +    I     S   
Sbjct: 112 NMRVWDVSTGQEVLSFSQKSIEAW----SLQFTDNESHALRLISNE----IQVYDPSKGF 163

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD--- 243
               + +     +G     L+P R+     P  S       +    +     V +     
Sbjct: 164 QSGSSMITKFKLEGLTSYKLSPGRN-----PSIS------IFIPEKNGSPACVKIFGLIG 212

Query: 244 -TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---------EAMDIYSVDLQSNA 293
            T           F++  +  +++ +G   L     D            ++Y +      
Sbjct: 213 LTSNSLPISSKTFFKADKVQFKWNRSGTSLLFLTHTDVDKTGKSYYGETNLYMLSANGTF 272

Query: 294 TERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
             R+T      I+    +SP+  +  F            +  + S+   I     A    
Sbjct: 273 DCRVTLDREGGIHDF-VWSPNDKE--FTVSYGYMPAKTTIFDHRSNL--IHDFGTAPRNF 327

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             ++PQG L+    F      I +  +   ++   +E SN     WSP GR ++ + 
Sbjct: 328 IAYNPQGRLLLTAGFGNLAGTIDIWDRRTLKKVSTIEGSNTSHCEWSPDGRFILCAT 384


>gi|312211355|emb|CBX91440.1| similar to dipeptidyl-peptidase V precursor [Leptosphaeria
           maculans]
          Length = 717

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 63/211 (29%), Gaps = 37/211 (17%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G       + +       +     +  RL ++ F+     Y       VF     G    
Sbjct: 146 GNTLAY--ENNGTAYNEELVTAPKSLGRLYDSNFVRHWNYYITAERYAVFSGILSGGNGS 203

Query: 329 YV-----------MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-------K 370
           Y            M    +  +   Q   +   D   SP G ++AF   + E        
Sbjct: 204 YSYAGELKNLLSGMNYTVTRPESPVQGSSSDPSDYDLSPDGSMVAFRSKAPELPKANYTA 263

Query: 371 FAIGVMKKDGSQERL----------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS---K 417
             I ++  DGS+  +                   PTWS   + L F ++   D  S   K
Sbjct: 264 SYIYIVPHDGSEVAVQVNGPGSSAPETAQGASGYPTWSHDSKKLAFGQQDGIDYESDRFK 323

Query: 418 LYSIDLNG-RNETLINTPAYASDPQ---WVG 444
           LY  D++G  ++       + S P    W  
Sbjct: 324 LYIADIDGLTSQVRSVAEDWDSAPSSLQWSP 354



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/289 (12%), Positives = 84/289 (29%), Gaps = 26/289 (8%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
             V   ++  G         L     +  + G  +  +         + SD     ++ +
Sbjct: 190 YAVFSGILSGGNGSYSYAGEL-----KNLLSGMNYTVTRPESPVQG-SSSDPSDYDLSPD 243

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD--------QILFEPRFSP 221
                 R         +      + ++  DG+ +                     P +S 
Sbjct: 244 GSMVAFRSKAPELPKANYTASY-IYIVPHDGSEVAVQVNGPGSSAPETAQGASGYPTWSH 302

Query: 222 NQQKVAYATYD----DEDILRVYLMDTR--IDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           + +K+A+   D    + D  ++Y+ D      +      ++ S   + ++S +     + 
Sbjct: 303 DSKKLAFGQQDGIDYESDRFKLYIADIDGLTSQVRSVAEDWDSAPSSLQWSPDDVDLWVV 362

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDREGKEQLYVMQ 332
            +   +  ++ V   + A     N    +      +  PD S  V  +      +++  Q
Sbjct: 363 SELHASNRLWLVPADAPADFEPVNFTGPDTVLSEFAVLPDGSAFV-SAAASWTSRMFYTQ 421

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKFSGEKFAIGVMKKDG 380
             G D+K +    E        S         T   G++    V    G
Sbjct: 422 YPGQDKKVLFTANEVDPELEGLSSDSVSNFWVTNDDGDEIQTFVFYPSG 470


>gi|302692076|ref|XP_003035717.1| hypothetical protein SCHCODRAFT_74045 [Schizophyllum commune H4-8]
 gi|300109413|gb|EFJ00815.1| hypothetical protein SCHCODRAFT_74045 [Schizophyllum commune H4-8]
          Length = 326

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 89/255 (34%), Gaps = 29/255 (11%)

Query: 115 RVIKEGK----DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
            V ++G+    + +    RLWDV    +I+G  F S            SDD     +   
Sbjct: 68  SVSRDGRKALYNSIEGTTRLWDVAGSGEIVG-TFESFAK---------SDDAQSGPSWSV 117

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
                   + S      +  +        G  +  ++  R++      F+P+ ++VA   
Sbjct: 118 SLHPEGETYASTGSSGNVTLHDARPGADFGRRLSSISSGRNKFGLSCVFAPDGKRVA--- 174

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               +  ++YL D           +    + +  +S++  + L+S  +D+ M ++ V   
Sbjct: 175 -MGSETGQIYLFDVESGMLANTYTSHAMGVRSLAWSAD-SQLLLSASEDKRMVLHDVRKS 232

Query: 291 --SNATERLTNTLFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKR 340
               +    T      +SA  S D   ++  S        D + +  +  +  +G +   
Sbjct: 233 EHGGSVTTFTGHSSWVLSADISVDGRYVLSGSADRTVKVWDMQTRAAVSTIAQDGGEVWS 292

Query: 341 ISQDKEASYFDPVWS 355
           ++ +K  S      S
Sbjct: 293 VAWNKAGSANGAFVS 307



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/235 (12%), Positives = 63/235 (26%), Gaps = 17/235 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS----SNGKRAL 273
             S + +K  Y + +    L        I    +           P +S      G+   
Sbjct: 68  SVSRDGRKALYNSIEGTTRLWDVAGSGEIVGTFESFAKSDDAQSGPSWSVSLHPEGETYA 127

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLF----INISASYSPDSSQIVFESDREGKEQLY 329
            +      + ++     ++   RL++         +S  ++PD  ++   S+     Q+Y
Sbjct: 128 STGS-SGNVTLHDARPGADFGRRLSSISSGRNKFGLSCVFAPDGKRVAMGSE---TGQIY 183

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLV 387
           +                       WS    L+             +   +  GS      
Sbjct: 184 LFDVESGMLANTYTSHAMGVRSLAWSADSQLLLSASEDKRMVLHDVRKSEHGGSVTTFTG 243

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             S + +   S  GR ++       D   K++ +       T+           W
Sbjct: 244 HSSWVLSADISVDGRYVL---SGSADRTVKVWDMQTRAAVSTIAQDGGEVWSVAW 295


>gi|290992797|ref|XP_002679020.1| predicted protein [Naegleria gruberi]
 gi|284092635|gb|EFC46276.1| predicted protein [Naegleria gruberi]
          Length = 544

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 82/261 (31%), Gaps = 17/261 (6%)

Query: 162 IYQSITGEKGDFNSRILFVSESVV---SGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEP 217
           I+     + G   + I F  E      SG +  ++ + D  G  +         + +   
Sbjct: 245 IHTYRGHQDGKMVTSIEFFPEYGHLLLSGSMDCTVKIWDVLGNRDCVRTYVGHTKAVRAS 304

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISV 276
            FS +  + A   YD     RV + DT      +   +  S     ++S   G++  + V
Sbjct: 305 SFSHDGAQFASCAYDK----RVNIWDTETGNILQTFTS-GSTPYCVKWSPLEGRQHEVIV 359

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                  +           +         S  +     + V  SD +   +L+      +
Sbjct: 360 GYSNNRIVQWDTRSGKIVRKYDRHTGSVNSLCFLDGGKKFVSSSD-DKSIRLWEYGVP-T 417

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           + K+I+  ++         P G  +       +        +   Q+  + +   +   +
Sbjct: 418 EVKKIADPEQHPMPFLEAHPNGKWMIAQSLDNQILTFDAQSRLKQQQNKIFKGHQIAGYS 477

Query: 397 ----WSPSGRSLIFSRKKDGD 413
               +S  G+ + FS    G+
Sbjct: 478 CQAGFSNDGKFV-FSGDYTGN 497


>gi|85109929|ref|XP_963155.1| hypothetical protein NCU08484 [Neurospora crassa OR74A]
 gi|7981360|emb|CAB92040.1| probable sepB protein [Neurospora crassa]
 gi|28924818|gb|EAA33919.1| hypothetical protein NCU08484 [Neurospora crassa OR74A]
          Length = 879

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 86/255 (33%), Gaps = 34/255 (13%)

Query: 207 TPSRDQILFEP-----RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           +  R +    P      ++P+  ++   T    +  R+Y   T  +  P  I + +   L
Sbjct: 7   SRPRSRPAHPPGATYCAYTPDGTRL--VTVGSNNTTRLY--KTGYEGEPTNIDDCQEQNL 62

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFES 320
           A   S+N     ++  +D  + +YS+D  +     L T+    ++  + SPD       S
Sbjct: 63  ALATSNN---YFVAGSEDGTVSLYSLDTNAFDRFLLRTSLPVRDV--AISPDHQWCAVAS 117

Query: 321 DR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           D             QL  ++ +G   K ++ D + S      +  G  + +      +  
Sbjct: 118 DELTVRLVGVHDNTQLRTLKEHGKPTKHLTFDPKGSLLALSCT-DG--VIYIYSLTAEHP 174

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             + K DG   RL  E        W P GR   F+          +  I  N   +  + 
Sbjct: 175 ELIRKVDGVIGRLETESEASSRAVWHPDGR--AFAA---PTPTRDIQVISKNDWEKQRVF 229

Query: 433 TPAYASDP---QWVG 444
              +  D     W  
Sbjct: 230 KSGHDGDITALSWSP 244



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 70/223 (31%), Gaps = 18/223 (8%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+G    ++ +   D              + +   SP+ Q  A A+    D L V L+  
Sbjct: 72  VAGSEDGTVSLYSLDTNAFDRFLLRTSLPVRDVAISPDHQWCAVAS----DELTVRLVGV 127

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--------SNATER 296
             +   + +           F   G    +S   D  + IYS+  +             R
Sbjct: 128 HDNTQLRTLKEHGKPTKHLTFDPKGSLLALSCT-DGVIYIYSLTAEHPELIRKVDGVIGR 186

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L      +  A + PD     F +    ++   + +++   Q+      +       WSP
Sbjct: 187 LETESEASSRAVWHPDGR--AFAAPTPTRDIQVISKNDWEKQRVFKSGHDGDITALSWSP 244

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            G L+A    +G+   + +            E  N+    W P
Sbjct: 245 NGALLA---SAGKDKKLLIWSTKDQSVIARYEYPNVTDICWHP 284



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 74/213 (34%), Gaps = 39/213 (18%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--------D 279
           +    ++  + +Y +DT          +    +     S + +   ++  +         
Sbjct: 71  FVAGSEDGTVSLYSLDTNAFDRFLLRTSLP--VRDVAISPDHQWCAVASDELTVRLVGVH 128

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN----- 334
           +   + ++      T+ LT          + P  S +   S  +G   +Y + +      
Sbjct: 129 DNTQLRTLKEHGKPTKHLT----------FDPKGSLLA-LSCTDGVIYIYSLTAEHPELI 177

Query: 335 ---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---E 388
                   R+  + EAS    VW P G   AF   +  +  I V+ K+  +++ +     
Sbjct: 178 RKVDGVIGRLETESEASSRA-VWHPDGR--AFAAPTPTR-DIQVISKNDWEKQRVFKSGH 233

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           D ++ A +WSP+G  L        D    ++S 
Sbjct: 234 DGDITALSWSPNGALLA---SAGKDKKLLIWST 263


>gi|240277594|gb|EER41102.1| periodic tryptophan protein [Ajellomyces capsulatus H143]
          Length = 914

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 86/242 (35%), Gaps = 27/242 (11%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K SL V+    +NI ++T +              + +A+ +     +L V+   +     
Sbjct: 286 KLSLTVISVSQSNIDFVTMNNS-----------GEWIAFGSSKLGQLL-VWEWQSE-SYI 332

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K+ G+  SM     +S +G++  I+   D  + ++  +         T       +  +
Sbjct: 333 LKQQGHLDSMNSL-VYSPDGQKI-ITAADDGRIKVWDTN-SGFCIVTFTEHTSGVTACQF 389

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S   + ++F +  +G  + + +     + +  +      +      P G+++        
Sbjct: 390 SKKGN-VLFTASLDGSIRAWDL-IRYRNFRTYTAPSRLGFSCLAVDPSGEVVCAGSLD-- 445

Query: 370 KFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            F + +      Q   RL      + + +++  GR L+      G     +    + GR 
Sbjct: 446 SFDVHIWSVQTGQLLDRLAGHQGPVSSLSFAADGRHLV-----SGSWDHTIRIWSIFGRT 500

Query: 428 ET 429
           +T
Sbjct: 501 QT 502



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 60/190 (31%), Gaps = 8/190 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ QK+  A  D     R+ + DT             S + A +FS  G   L +   
Sbjct: 347 YSPDGQKIITAADDG----RIKVWDTNSGFCIVTFTEHTSGVTACQFSKKGN-VLFTASL 401

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++       T    +  S   + D S  V  +       +++        
Sbjct: 402 DGSIRAWDL-IRYRNFRTYTAPSRLGFS-CLAVDPSGEVVCAGSLDSFDVHIWSVQTGQL 459

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                  +       ++  G  +    +      I  +         L   ++L +  + 
Sbjct: 460 LDRLAGHQGPVSSLSFAADGRHLVSGSWDHT-IRIWSIFGRTQTSEPLELQADLLSVAFR 518

Query: 399 PSGRSLIFSR 408
           P G+ +  S 
Sbjct: 519 PDGKQIAASS 528


>gi|332094328|gb|EGI99379.1| rhomboid family protein [Shigella boydii 5216-82]
          Length = 625

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 85/254 (33%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T       F    S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSFI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+        +I  ++  ++  E            +  +
Sbjct: 440 TGTSGKLGAWVMALSPDERTLLVPGA--GRGNIVRINTITHQKEDFPAGDARGTISAMRF 497

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ V     S   +      + Y     SP G  +A   +  +
Sbjct: 498 RPENGEVIFA-DSQGISRISVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 554

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +  P +S  GR + F   K+G     L  +D       
Sbjct: 555 GYVI-LLNINAGQIIGVYPASYVNHPRFSADGRKI-FVMAKNG-----LIQMDRT----R 603

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 604 SLDPQAIIRHPQYG 617



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 22/149 (14%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
            P + R     I+   +Q      GD    I  +     +G       V+  D   I  +
Sbjct: 462 VPGAGRGNIVRINTITHQKEDFPAGDARGTISAMRFRPENGE------VIFADSQGISRI 515

Query: 207 TPSRDQILFEPRF-----------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +    Q     ++           SP+ Q +A  +Y  +     Y++   I+        
Sbjct: 516 SVGDQQASIMTQWCSRSVYSVEGISPDGQYLALVSYGLQG----YVILLNINAGQIIGVY 571

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDI 284
             S +  PRFS++G++    + K+  + +
Sbjct: 572 PASYVNHPRFSADGRKI-FVMAKNGLIQM 599


>gi|242096568|ref|XP_002438774.1| hypothetical protein SORBIDRAFT_10g025990 [Sorghum bicolor]
 gi|241916997|gb|EER90141.1| hypothetical protein SORBIDRAFT_10g025990 [Sorghum bicolor]
          Length = 343

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 79/266 (29%), Gaps = 31/266 (11%)

Query: 186 SGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG     + +    G      +       + + +++ +  ++  A+ D      V + D 
Sbjct: 70  SGSHDKDIFLWYVHGECKNFMVLRGHKNAILDLQWTTDGTQIISASPDK----TVRVWDV 125

Query: 245 RIDRAPKRIGNFRSMILA--PR--FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              +  K++    S + +  P   +       ++S   D    ++  DL+     +    
Sbjct: 126 ETGKQVKKMAEHSSFVNSCCPARKWPP----LVVSGSDDGTAKLW--DLRQRGAIQTLPD 179

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +   + S+S  + + VF    +    +       ++     +  +        SP G  
Sbjct: 180 KYQITAVSFSEAADK-VFTGGLD--NDVKWWDLRKNEVTEYLKGHQDMITGMQLSPDGSY 236

Query: 361 IAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDGD 413
           +       E   + +     +    + L    +         +WSP  R +       G 
Sbjct: 237 LLTNAMDNELKIWDLRPYAPENRNIKTLTGHQHNFEKNLLKCSWSPDNRKV-----TAGS 291

Query: 414 TGSKLYSIDLNGRNETLINTPAYASD 439
               +Y  D   R   L   P +   
Sbjct: 292 ADRMVYIWDTTSR-RILYKLPGHNGS 316


>gi|213964024|ref|ZP_03392268.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
 gi|213953356|gb|EEB64694.1| OmpA/MotB domain protein [Capnocytophaga sputigena Capno]
          Length = 635

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 70/189 (37%), Gaps = 49/189 (25%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGK--------------EQLYVMQSNG---SDQKRI 341
           NT +     ++     ++VF +   GK                LYV   N    S++K +
Sbjct: 141 NTEYSEYGPTFY--GDKVVFAAATSGKASKGGVSQWTGEGFYDLYVADRNKQKLSNKKPL 198

Query: 342 SQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL------------- 386
           S   + + +    V++  G  + FT+ +     +G  K++    ++L             
Sbjct: 199 SDVINTKFNESTAVFTKDGKTVYFTRNNYVNKRLGTDKENTILLKILRATKESNGDWGNV 258

Query: 387 ------VEDSNLQAPTWSPSGRSLIFSRKKDGD-TGSKLYSIDLNGRNE--------TLI 431
                  +  N+  P  SP  + L F+    G   GS ++ +++ G N+         +I
Sbjct: 259 VEVPFNSDQYNVAHPALSPDEKYLYFASDMPGTLGGSDIFRVEILGGNKYGKPENLGNVI 318

Query: 432 NTPAYASDP 440
           NTP   S P
Sbjct: 319 NTPGRESFP 327



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 50/299 (16%), Positives = 94/299 (31%), Gaps = 53/299 (17%)

Query: 67  EVVSKDLQRSDVFNL----ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK-EGK 121
           EV+      S  F L    ++ +  +   T       F    S  A     G V +  G+
Sbjct: 124 EVIQA---NSGRFKLNPIALNTEYSEYGPTFYGDKVVFAAATSGKAS---KGGVSQWTGE 177

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE-KGDFNSRILFV 180
                +  + D   +K        S+      + +T  ++     T + K  + +R  +V
Sbjct: 178 GFY--DLYVADRNKQK-------LSNKKPLSDVINTKFNESTAVFTKDGKTVYFTRNNYV 228

Query: 181 SESVVSGIIKNSLCVMDRD--------GANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           ++ + +      L  + R         G  +     S    +  P  SP+++ + +A+  
Sbjct: 229 NKRLGTDKENTILLKILRATKESNGDWGNVVEVPFNSDQYNVAHPALSPDEKYLYFASDM 288

Query: 233 DE-----DILRVYLMDTRIDRAPKRIGNF---RSMILAPRFSSNGKRALISVQKDEAMDI 284
                  DI RV ++       P+ +GN          P  S   K  ++    D    +
Sbjct: 289 PGTLGGSDIFRVEILGGNKYGKPENLGNVINTPGRESFPFIS---KNNVMYYSSDGFPGL 345

Query: 285 YSVDL------QSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +D+       +      T +  INI     S D     F  D + K         G 
Sbjct: 346 GGLDIFAVKFYDNG-----TTSKPINIGRPGNSADDD-FCFIMDSDSKIGFLTSNRPGG 398


>gi|198451403|ref|XP_001358349.2| GA18190 [Drosophila pseudoobscura pseudoobscura]
 gi|198131474|gb|EAL27488.2| GA18190 [Drosophila pseudoobscura pseudoobscura]
          Length = 752

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 62/181 (34%), Gaps = 14/181 (7%)

Query: 151 WRKIAHTI-SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           WR  AH +    IY+S        +   +       S  +   L  ++R+ A I Y   +
Sbjct: 527 WR--AHNLHCAAIYRSHNYPIWCMDESPVGQYVVTGSKDLSARLWSLEREHALIIYAGHT 584

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           +D       F PN   +A  + D      V L      +  +   + R  +    FS +G
Sbjct: 585 QDVECV--AFHPNGSYLASGSADH----SVRLWCATSGKLMRVFTDCRQAVTNLAFSPDG 638

Query: 270 KRALISVQKDEAMDIYSVDL-QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           K         E   +   DL        L +      S ++SP +  +   +  +G  +L
Sbjct: 639 KMLA---AAGEEAKVRIFDLAAGAQLSELKDHPSPVSSLAWSPHNQHLA-TTCSDGSLRL 694

Query: 329 Y 329
           +
Sbjct: 695 W 695



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 65/161 (40%), Gaps = 19/161 (11%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREG 324
           S  G+  +++  KD +  ++S++ +      +      ++   ++ P+ S +   S  + 
Sbjct: 551 SPVGQY-VVTGSKDLSARLWSLEREHALI--IYAGHTQDVECVAFHPNGSYLASGS-ADH 606

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             +L+   +      R+  D   +  +  +SP G ++A    +GE+  + +         
Sbjct: 607 SVRLWC--ATSGKLMRVFTDCRQAVTNLAFSPDGKMLA---AAGEEAKVRIFDLAAGA-- 659

Query: 385 LLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            L E  +  +P     WSP  + L  +   DG    +L+ I
Sbjct: 660 QLSELKDHPSPVSSLAWSPHNQHLA-TTCSDGS--LRLWDI 697


>gi|71412084|ref|XP_808243.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70872409|gb|EAN86392.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 530

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 68/199 (34%), Gaps = 18/199 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G      T  RD ++     SP+ + +A  + D     +  L+   I      I     +
Sbjct: 269 GKEEGIFTGHRDLVICT-AVSPDGKYLATTSKD-----QTMLIWDAIITKVLHILRHGMV 322

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           ++   FS +    ++S  +D    ++ V  +       +    I +S ++SPD + +   
Sbjct: 323 VICCCFSPDSNT-VVSGCQDRVCRLWGV-RKGKERVAYSKHAGIIVSVAFSPDGNYVCST 380

Query: 320 S-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK- 377
           S DR     L+V  +   +                ++  G  I     S ++  + V   
Sbjct: 381 SADRT----LHVWSATTGNTYLKLNGHVGIVLACSYTSDGKYII----SNDETHLCVWSA 432

Query: 378 KDGSQERLLVEDSNLQAPT 396
            DGS +  L        P 
Sbjct: 433 ADGSCQLRLAVTELAGKPR 451



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 70/202 (34%), Gaps = 21/202 (10%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V L      +        R +++    S +GK    +  KD+ M I+  D        +
Sbjct: 260 SVTLRSLVTGKEEGIFTGHRDLVICTAVSPDGKYLA-TTSKDQTMLIW--DAIITKVLHI 316

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSP 356
                + I   +SPDS+ +V       ++++  +      ++R++  K A       +SP
Sbjct: 317 LRHGMVVICCCFSPDSNTVV----SGCQDRVCRLWGVRKGKERVAYSKHAGIIVSVAFSP 372

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI--------F 406
            G+ +  T        + V         L +      + A +++  G+ +I         
Sbjct: 373 DGNYVCSTSADRT---LHVWSATTGNTYLKLNGHVGIVLACSYTSDGKYIISNDETHLCV 429

Query: 407 SRKKDGDTGSKLYSIDLNGRNE 428
               DG    +L   +L G+  
Sbjct: 430 WSAADGSCQLRLAVTELAGKPR 451



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 71/214 (33%), Gaps = 27/214 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+   V     D        L   R  +          +I++  FS +G     S   
Sbjct: 328 FSPDSNTVVSGCQDR----VCRLWGVRKGKERVAYSKHAGIIVSVAFSPDGNYVC-STSA 382

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--------SDREGKEQLYV 330
           D  + ++S     N   +L   + I ++ SY+ D   I+          S  +G  QL +
Sbjct: 383 DRTLHVWSA-TTGNTYLKLNGHVGIVLACSYTSDGKYIISNDETHLCVWSAADGSCQLRL 441

Query: 331 MQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
             +      +  S+  + ++     +P G    +   +     + ++      E+     
Sbjct: 442 AVTELAGKPRGTSRAGKLAWTSSCAAP-GAFTRYMAVACTNRFVYILDICNGSEQ---SS 497

Query: 390 SNLQAPTWSPSGRS---LIFSRKKDGDTGSKLYS 420
              +AP +  +G     + F     GD    LY 
Sbjct: 498 VFCKAPVYCLAGGYKEKIAF-----GDNFGNLYV 526


>gi|326403254|ref|YP_004283335.1| putative peptidase S9 [Acidiphilium multivorum AIU301]
 gi|325050115|dbj|BAJ80453.1| putative peptidase S9 [Acidiphilium multivorum AIU301]
          Length = 641

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 13/144 (9%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAF 363
             A  SPD   I F + R G   L+V      D  R ++ ++        W+  G  +  
Sbjct: 25  AGAQISPDGGTIAFLAPRNGVMNLFVAPRGRIDAARPLTDERRRGIPGYAWAHDGRHLLV 84

Query: 364 TKFSGE--KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKDGDTG 415
            K +     F +  + ++    R L     +Q      +P   P G +++ S        
Sbjct: 85  VKDNDGDENFHLHAVDRETGAMRDLTPHGPIQASIVKLSPR-HP-GEAVV-SHNARDPQW 141

Query: 416 SKLYSIDL-NGRNETLINTPAYAS 438
             LY I++  GR+  +   P  A 
Sbjct: 142 PDLYRIEIATGRSTMIAENPGLAG 165



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 37/128 (28%), Gaps = 24/128 (18%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAP-- 395
            R +            SP G  IAF         + V  +      R L ++     P  
Sbjct: 14  PRAALFGNPRRAGAQISPDGGTIAFLAPRNGVMNLFVAPRGRIDAARPLTDERRRGIPGY 73

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-------------------- 435
            W+  GR L+  +  DGD    L+++D        +                        
Sbjct: 74  AWAHDGRHLLVVKDNDGDENFHLHAVDRETGAMRDLTPHGPIQASIVKLSPRHPGEAVVS 133

Query: 436 -YASDPQW 442
             A DPQW
Sbjct: 134 HNARDPQW 141



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 86/245 (35%), Gaps = 43/245 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+   +A+    +  +        RID A       R  I    ++ +G+  L+    
Sbjct: 29  ISPDGGTIAFLAPRNGVMNLFVAPRGRIDAARPLTDERRRGIPGYAWAHDGRHLLVVKDN 88

Query: 279 DE--AMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQ---LYVMQ 332
           D      +++VD ++ A   LT    I  S    SP        S      Q   LY ++
Sbjct: 89  DGDENFHLHAVDRETGAMRDLTPHGPIQASIVKLSPRHPGEAVVSHNARDPQWPDLYRIE 148

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV---MKKDGSQERLLVED 389
                   I+++   + FD                 E FA+ +   ++ DGSQ  L  + 
Sbjct: 149 IATGRSTMIAENPGLAGFD---------------VDEDFALRLAARLEGDGSQTVLRPDG 193

Query: 390 SNLQAP--TWSP--------------SGR-SLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +   AP   ++P               GR +L+ S    G   + L+ +DL     T++ 
Sbjct: 194 AGGWAPFMRFAPEDAMTSGVLGLFTADGRATLMLSS--AGRDTAALFRLDLETGEATMLA 251

Query: 433 TPAYA 437
             A A
Sbjct: 252 EDARA 256



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 62/194 (31%), Gaps = 27/194 (13%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISA-SYSPDSSQIVF 318
             + S +G        ++  M+++    +    A   LT+     I   +++ D   ++ 
Sbjct: 26  GAQISPDGGTIAFLAPRNGVMNLFVAP-RGRIDAARPLTDERRRGIPGYAWAHDGRHLLV 84

Query: 319 ESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKF-AI 373
             D +G     L+ +       + ++            SP+  G+ +        ++  +
Sbjct: 85  VKDNDGDENFHLHAVDRETGAMRDLTPHGPIQASIVKLSPRHPGEAVVSHNARDPQWPDL 144

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS-IDLNGRNETLIN 432
             ++    +  ++ E+  L                  D D   +L + ++ +G    L  
Sbjct: 145 YRIEIATGRSTMIAENPGLAGF-------------DVDEDFALRLAARLEGDGSQTVLRP 191

Query: 433 TPAYASDPQWVGFM 446
             A      W  FM
Sbjct: 192 DGAGG----WAPFM 201


>gi|322703547|gb|EFY95154.1| Pfs, NACHT and WD domain protein [Metarhizium anisopliae ARSEF 23]
          Length = 1530

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 61/371 (16%), Positives = 121/371 (32%), Gaps = 78/371 (21%)

Query: 119  EGKDRLRVEF------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             G  R           R+WD             S    ++ +       + +      G 
Sbjct: 999  SGDGRYVATCSDDKTVRIWD-------------SHTGEFQVLLDRFDKWVNRLTFSPSG- 1044

Query: 173  FNSRILFVSESVVSGIIKNSLCVMDR--DGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
                +L  S+     I    L V+++  DG N   + P     +    FSP   ++A A 
Sbjct: 1045 ----LLATSDDSAIKIWDYRLSVLEKTLDGNN---MFPGDGFEISHVTFSPKGDQLAAAI 1097

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            +     + ++   T   +  +R    R +    +FS++G+   I+   D    +   D +
Sbjct: 1098 WTT---VFIWDTQTYEAKKWERQTCIRRL----KFSADGRLLAIASSND-ITIVLVEDGR 1149

Query: 291  SNATERLTNTLFINISASYSPDSSQIVFESD------------------REGKEQLYV-- 330
            S  +  L N         +SPDS  +   S                   R G + + +  
Sbjct: 1150 SEWSRPLENNKEKINGICFSPDSKSMASCSTDGIVKVWDITSGAPPHTIRFGLDTIAIEA 1209

Query: 331  MQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL- 386
                G++   Q++I   +        +SP    +A +  +  + A  +   + +   +L 
Sbjct: 1210 WNIQGTEYDIQQKILSCQSRPVLSLSYSPTEQFLASSSTATGEVA-RIWDLENASLPILN 1268

Query: 387  -VEDSNLQAP-----------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              E +    P           T S SG+ +  S   DG     +++    GR++  ++  
Sbjct: 1269 VSERAGDVVPHAKHKESVCFVTISVSGQLIA-SASSDGQ--IHIWN-GCTGRHKKPLDLS 1324

Query: 435  AYASDPQWVGF 445
                   W+ F
Sbjct: 1325 EEHKSIMWLAF 1335



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 22/146 (15%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR---- 248
            + V   + +       + +  +    FSP+ + +A    D    ++V+ +     R    
Sbjct: 1351 ILVWHLEASTQPRWCHAHEDWVRSAVFSPDSKLLASVADD--GNVKVWKLGPESQRSLEE 1408

Query: 249  -APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQS---------NATERL 297
              PK +    SM++   FS++GK            D   + DL S             + 
Sbjct: 1409 QQPKILKGHASMVICAAFSADGKLLA-----SGGGDCVRIWDLTSVTHQNGQGATELSQF 1463

Query: 298  TNTLFINISASYSPDSSQIVFESDRE 323
                    + ++ PD   +V  S  +
Sbjct: 1464 EEHEETVTAVAFFPDGEFLVSSSRSD 1489


>gi|189206880|ref|XP_001939774.1| periodic tryptophan protein 2 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187975867|gb|EDU42493.1| periodic tryptophan protein 2 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 888

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 88/228 (38%), Gaps = 19/228 (8%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D A I  L+ S++ I +    +   + +A+       +L V+   +      K+ G+F 
Sbjct: 285 PDFAQISSLSISQNDIDYV-AINKTGEWLAFGASKLGQLL-VWEWQSE-SYILKQQGHFD 341

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           SM     +S +G+R  I+   D  + ++ V+         T  +    +  ++   + ++
Sbjct: 342 SMNTI-AYSPDGQRI-ITAADDGKIKVWEVN-SGFCVVTFTEHMGGVTACEFAKKGN-VL 397

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F +  +G  + + +     + +  +     S+      P G+++         F I +  
Sbjct: 398 FTASLDGSVRAWDLHR-YRNFRTFTAPSRLSFSSLAVDPSGEVVCAGSID--SFDIHIWS 454

Query: 378 KDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 +LL   S  + P    ++SP   +L+       D   ++++I
Sbjct: 455 VQTG--QLLDRLSGHEGPVSSLSFSPDASTLV---SGSWDRTVRIWNI 497



 Score = 37.3 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 85/273 (31%), Gaps = 25/273 (9%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H +    Y S+   +   +SR         S  +   +  +D++  + +       Q + 
Sbjct: 143 HRVYTGHYNSVQSIEWSSDSRFFL----SASKDMTARIWSVDQEEGHAQTTLSGHRQEVV 198

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLM--------------DTRIDRAPKRIGNFRS-MI 260
              FS +Q+ +   + D       Y++              + +   A +   +  +  +
Sbjct: 199 GVWFSKDQETIYTVSKDGALFTWKYMLRYDAPEDADEDDDENLQWGIAERHFFHQNNAHV 258

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               F     + L++        I+ +         L+ +       + +     + F +
Sbjct: 259 TCANFHPE-SKLLVTGFSHGIFFIHELP-DFAQISSLSISQNDIDYVAINKTGEWLAFGA 316

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            + G+  ++  QS     K+  Q    S     +SP G  I  T     K  +  +    
Sbjct: 317 SKLGQLLVWEWQSESYILKQ--QGHFDSMNTIAYSPDGQRII-TAADDGKIKVWEVNSGF 373

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                      + A  ++  G  ++F+   DG 
Sbjct: 374 CVVTFTEHMGGVTACEFAKKGN-VLFTASLDGS 405


>gi|13991856|gb|AAK51528.1|AF363975_1 p36 LACK protein [Leishmania major]
 gi|2662477|gb|AAB88300.1| LACK [Leishmania major]
          Length = 312

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 12/167 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + D R  +  ++       +LA  FS +  R ++S  +D  + +++V  +       
Sbjct: 88  SIRMWDLRNGQCQRKFLKHTKDVLAVAFSPD-DRLIVSAGRDNVIRVWNVAGECMHEFLR 146

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            +      S  +SP     +  S       + V   NG   +R  +           SP 
Sbjct: 147 DSHEDWVSSICFSPSLEHPIVVSG-SWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPD 205

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPS 400
           G L A     G+  A  +      +   L +  N+++P     +SP+
Sbjct: 206 GSLCA---SGGKDGAALLWDLSTGE--QLFK-INVESPINQIAFSPN 246



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 17/163 (10%)

Query: 163 YQSITGEKGDFNSRILFV----SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           ++ +     D+ S I F        VVSG   N++ V + +G             +    
Sbjct: 142 HEFLRDSHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVT 201

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+    A             L D        +I N  S I    FS N     ++ ++
Sbjct: 202 VSPDGSLCA----SGGKDGAALLWDLSTGEQLFKI-NVESPINQIAFSPNRFWMCVATER 256

Query: 279 DEAMDIYSVDLQSNATE-RLTNT---LFINISASYSPDSSQIV 317
                +   DL+S A    LT         IS ++S D + + 
Sbjct: 257 S----LSVYDLESKAVIAELTPDGAKPSECISIAWSADGNTLY 295


>gi|241982696|ref|NP_700465.2| aladin [Mus musculus]
 gi|20137304|sp|P58742|AAAS_MOUSE RecName: Full=Aladin; AltName: Full=Adracalin
 gi|17390426|gb|AAH18191.1| Achalasia, adrenocortical insufficiency, alacrimia [Mus musculus]
 gi|26330051|dbj|BAC28764.1| unnamed protein product [Mus musculus]
 gi|26350617|dbj|BAC38945.1| unnamed protein product [Mus musculus]
 gi|74141643|dbj|BAE38581.1| unnamed protein product [Mus musculus]
 gi|74144029|dbj|BAE22131.1| unnamed protein product [Mus musculus]
 gi|74222379|dbj|BAE38099.1| unnamed protein product [Mus musculus]
          Length = 546

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 71/198 (35%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  D  D +RVY  ++ I   P      +  + A  +       L    
Sbjct: 158 AWHPHTNKFAVALLD--DSIRVYNANSTI--VPSLKHRLQRNVAALAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P+   ++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPNGGWLLSASPVD--AVIL 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  +  T  S   F +   +    +       
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVLATTPS-AVFRVWEAQMWTCEAW-PTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGNRLLFT 346


>gi|148259778|ref|YP_001233905.1| peptidase S9 prolyl oligopeptidase [Acidiphilium cryptum JF-5]
 gi|146401459|gb|ABQ29986.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Acidiphilium cryptum JF-5]
          Length = 641

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 13/144 (9%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAF 363
             A  SPD   I F + R G   L+V      D  R ++ ++        W+  G  +  
Sbjct: 25  AGAQISPDGGTIAFLAPRNGVMNLFVAPRGRIDAARPLTDERRRGIPGYAWAHDGRHLLV 84

Query: 364 TKFSGE--KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKDGDTG 415
            K +     F +  + ++    R L     +Q      +P   P G +++ S        
Sbjct: 85  VKDNDGDENFHLHAVDRETGAMRDLTPHGPIQASIVKLSPR-HP-GEAVV-SHNARDPQW 141

Query: 416 SKLYSIDL-NGRNETLINTPAYAS 438
             LY I++  GR+  +   P  A 
Sbjct: 142 PDLYRIEIATGRSTMIAENPGLAG 165



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 37/128 (28%), Gaps = 24/128 (18%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAP-- 395
            R +            SP G  IAF         + V  +      R L ++     P  
Sbjct: 14  PRAALFGNPRRAGAQISPDGGTIAFLAPRNGVMNLFVAPRGRIDAARPLTDERRRGIPGY 73

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-------------------- 435
            W+  GR L+  +  DGD    L+++D        +                        
Sbjct: 74  AWAHDGRHLLVVKDNDGDENFHLHAVDRETGAMRDLTPHGPIQASIVKLSPRHPGEAVVS 133

Query: 436 -YASDPQW 442
             A DPQW
Sbjct: 134 HNARDPQW 141



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 50/245 (20%), Positives = 86/245 (35%), Gaps = 43/245 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+   +A+    +  +        RID A       R  I    ++ +G+  L+    
Sbjct: 29  ISPDGGTIAFLAPRNGVMNLFVAPRGRIDAARPLTDERRRGIPGYAWAHDGRHLLVVKDN 88

Query: 279 DE--AMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQ---LYVMQ 332
           D      +++VD ++ A   LT    I  S    SP        S      Q   LY ++
Sbjct: 89  DGDENFHLHAVDRETGAMRDLTPHGPIQASIVKLSPRHPGEAVVSHNARDPQWPDLYRIE 148

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV---MKKDGSQERLLVED 389
                   I+++   + FD                 E FA+ +   ++ DGSQ  L  + 
Sbjct: 149 IATGRSTMIAENPGLAGFD---------------VDEDFALRLAARLEGDGSQTVLRPDG 193

Query: 390 SNLQAP--TWSP--------------SGR-SLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +   AP   ++P               GR +L+ S    G   + L+ +DL     T++ 
Sbjct: 194 AGGWAPFMRFAPEDAMTSGVLGLFTADGRATLMLSS--AGRDTAALFRLDLETGEATMLA 251

Query: 433 TPAYA 437
             A A
Sbjct: 252 EDARA 256



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/194 (12%), Positives = 62/194 (31%), Gaps = 27/194 (13%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISA-SYSPDSSQIVF 318
             + S +G        ++  M+++    +    A   LT+     I   +++ D   ++ 
Sbjct: 26  GAQISPDGGTIAFLAPRNGVMNLFVAP-RGRIDAARPLTDERRRGIPGYAWAHDGRHLLV 84

Query: 319 ESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKF-AI 373
             D +G     L+ +       + ++            SP+  G+ +        ++  +
Sbjct: 85  VKDNDGDENFHLHAVDRETGAMRDLTPHGPIQASIVKLSPRHPGEAVVSHNARDPQWPDL 144

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS-IDLNGRNETLIN 432
             ++    +  ++ E+  L                  D D   +L + ++ +G    L  
Sbjct: 145 YRIEIATGRSTMIAENPGLAGF-------------DVDEDFALRLAARLEGDGSQTVLRP 191

Query: 433 TPAYASDPQWVGFM 446
             A      W  FM
Sbjct: 192 DGAGG----WAPFM 201


>gi|94314318|ref|YP_587527.1| hypothetical protein Rmet_5399 [Cupriavidus metallidurans CH34]
 gi|93358170|gb|ABF12258.1| conserved hypothetical protein, putative exported protein, Nitrous
           oxide reductase N-terminal domain protein [Cupriavidus
           metallidurans CH34]
          Length = 500

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 43/227 (18%), Positives = 83/227 (36%), Gaps = 14/227 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           PN ++V + T   E+ + V    T  + A  ++ +   M +   FS +GK   +    + 
Sbjct: 147 PNGKEV-WITVRGENYIAVLDAATFAETARIKVADGPGMQI---FSPDGKYGYVCSSFNP 202

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              + SV        R+        + + +PD  Q+ F     GK Q++  Q      + 
Sbjct: 203 ETAVVSV-ADHKIVGRVKQESPFCPNIAATPDGKQVWFTLKDIGKTQVFEAQPPFRPIRT 261

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SP 399
           I      ++ +   +  G  +A+    G    + V + D       +   +L    W S 
Sbjct: 262 IETGPITNHVNFAHTAAGT-LAYVTI-GGLNQVKVFRTDDFSPVATIPVGSLPHGVWPSG 319

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
            G  +        +   KL  ID    N+ + N P   + PQ + ++
Sbjct: 320 DGSRIY----VGLENADKLAVID-TATNQVVANVPVGQA-PQAIAYV 360



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 52/149 (34%), Gaps = 14/149 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A  +     +  +      +    K +           ++ NGK   I+V+ 
Sbjct: 103 FSPDHRTLAIVSIGSNSVSFIDTATNAV----KHVTYVGRSPHEAFYTPNGKEVWITVR- 157

Query: 279 DEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                I  +D  + A     ++ +   + I   +SPD       S     E   V  ++ 
Sbjct: 158 -GENYIAVLDAATFAETARIKVADGPGMQI---FSPDGKYGYVCSSFN-PETAVVSVADH 212

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               R+ Q+      +   +P G  + FT
Sbjct: 213 KIVGRVKQESP-FCPNIAATPDGKQVWFT 240


>gi|315500570|ref|YP_004089372.1| WD40-like beta Propeller containing protein [Asticcacaulis
           excentricus CB 48]
 gi|315418582|gb|ADU15221.1| WD40-like beta Propeller containing protein [Asticcacaulis
           excentricus CB 48]
          Length = 456

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 45/304 (14%), Positives = 96/304 (31%), Gaps = 34/304 (11%)

Query: 134 KDRKQIIGK-KFFSSPASWRKIA--HTISDDIYQSITGE--KGDFNSRILFVSESVVSGI 188
            D   ++G+  + + P   R  A         Y ++  +    +F            +  
Sbjct: 167 ADDTLLLGQVAYGAKPLQPRDKASVDKFGQAEYAALGPDGKPLNFAKAKGVRMLERWAAR 226

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           +   L  +D      R +  + ++ +   +FSP    +     +        +   + D 
Sbjct: 227 VPAELFTIDLKTQ-ARRVLFTTEEWIGHAQFSPTDPTLIRFCMEGPWHRVDRIKLIKSDG 285

Query: 249 APKRIGNFRSMIL----APRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTNTL 301
              +  + RSM +       FS +GK     +Q       +   L+        +  +  
Sbjct: 286 TGLKSVHTRSMNMEIWGHEFFSHDGKWLWYDLQTPRGQVFWVAGLELATGRRVWKRLDQN 345

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              +  + +PD+    F SD  G   +     +G     +  +       P +     LI
Sbjct: 346 DWGVHFNIAPDNKT--FASD-GGDADMVAHAPDGKWISLLEAETIVDADLPSY--DEKLI 400

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLY 419
              KF   +    ++       RL         P   ++P G+ L+F     G   + +Y
Sbjct: 401 TIEKFKATR----LVDMGAHDYRL--------EPNLRFTPDGKWLVFVSNMHG--ANHVY 446

Query: 420 SIDL 423
           ++D 
Sbjct: 447 AVDA 450



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 59/181 (32%), Gaps = 36/181 (19%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPR--FSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            + ++  DG  ++ +      +       FS + + + Y         +V+ +       
Sbjct: 277 RIKLIKSDGTGLKSVHTRSMNMEIWGHEFFSHDGKWLWYDLQTPRG--QVFWVAGLELAT 334

Query: 250 PKRIG-----NFRSM--ILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSN------- 292
            +R+      N   +   +AP    F+S+G  A +     +   I  ++ ++        
Sbjct: 335 GRRVWKRLDQNDWGVHFNIAPDNKTFASDGGDADMVAHAPDGKWISLLEAETIVDADLPS 394

Query: 293 -----------ATERLTNTLFINI--SAS--YSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                         RL +    +     +  ++PD   +VF S+  G   +Y + +    
Sbjct: 395 YDEKLITIEKFKATRLVDMGAHDYRLEPNLRFTPDGKWLVFVSNMHGANHVYAVDARPGA 454

Query: 338 Q 338
            
Sbjct: 455 T 455


>gi|212722116|ref|NP_001132221.1| hypothetical protein LOC100193655 [Zea mays]
 gi|194693802|gb|ACF80985.1| unknown [Zea mays]
          Length = 344

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 79/266 (29%), Gaps = 31/266 (11%)

Query: 186 SGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG     + +    G      +       + + +++ +  ++  A+ D      V + D 
Sbjct: 71  SGSHDKDIFLWYVHGECKNFMVLRGHKNAILDLQWTTDGTQIISASPDK----TVRVWDV 126

Query: 245 RIDRAPKRIGNFRSMILA--PR--FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              +  K++    S + +  P   +       ++S   D    ++  DL+     +    
Sbjct: 127 ETGKQVKKMAEHSSFVNSCCPARKWPP----LVVSGSDDGTAKLW--DLRQRGAIQTLPD 180

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +   + S+S  + + VF    +    +       ++     +  +        SP G  
Sbjct: 181 KYQITAVSFSEAADK-VFTGGLD--NDVKWWDLRKNETTEYLKGHQDMITGMQLSPDGSY 237

Query: 361 IAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDGD 413
           +       E   + +     +    + L    +         +WSP  R +       G 
Sbjct: 238 LLTNAMDNELKIWDLRPYAPENRNIKTLTGHQHNFEKNLLKCSWSPDNRKV-----TAGS 292

Query: 414 TGSKLYSIDLNGRNETLINTPAYASD 439
               +Y  D   R   L   P +   
Sbjct: 293 ADRMVYIWDTTSR-RILYKLPGHNGS 317


>gi|2462069|emb|CAA04998.1| vanadium chloroperoxidase [Nostoc sp. PCC 7120]
          Length = 186

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 60/164 (36%), Gaps = 17/164 (10%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +++VSG    S+ +          L       Q +     SP+ Q +A  + D      +
Sbjct: 15  QTLVSGSTNGSIKIWQLTTPRPIPLYTIIGHSQAVRSVVISPDGQTLASGSVDQ----TI 70

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L   R     + +      + +  FS NG+    S   D  +  +  D+ +    +L +
Sbjct: 71  KLWSWRDRNLLRTLTGHSGAVWSVAFSPNGQTLA-SGSNDRTIKRW--DIATG---QLID 124

Query: 300 TLFINISASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               + +  +    SPD   +   S  +   +L+ ++S+ S Q 
Sbjct: 125 NFVGHTNPVWSVTFSPDGQTLASGSG-DQTIKLWSIKSDTSSQT 167



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 54/165 (32%), Gaps = 8/165 (4%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN Q +   +      ++++ + T        I      + +   S +G+    S   D
Sbjct: 11  APNNQTL--VSGSTNGSIKIWQLTTPRPIPLYTIIGHSQAVRSVVISPDGQTLA-SGSVD 67

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + + ++S     N    LT       S ++SP+   +   S+      +           
Sbjct: 68  QTIKLWS-WRDRNLLRTLTGHSGAVWSVAFSPNGQTLASGSN---DRTIKRWDIATGQLI 123

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                     +   +SP G  +A +    +   +  +K D S + 
Sbjct: 124 DNFVGHTNPVWSVTFSPDGQTLA-SGSGDQTIKLWSIKSDTSSQT 167



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 44/127 (34%), Gaps = 11/127 (8%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   +   S     + + +      +  R       + +   +SP G  +A       
Sbjct: 55  SPDGQTLASGSV---DQTIKLWSWRDRNLLRTLTGHSGAVWSVAFSPNGQTLASGSNDRT 111

Query: 370 KFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              I        Q     +   + + + T+SP G++L       GD   KL+SI  +  +
Sbjct: 112 ---IKRWDIATGQLIDNFVGHTNPVWSVTFSPDGQTLA---SGSGDQTIKLWSIKSDTSS 165

Query: 428 ETLINTP 434
           +T   + 
Sbjct: 166 QTHTQSN 172


>gi|311256723|ref|XP_003126777.1| PREDICTED: POC1 centriolar protein homolog B-like [Sus scrofa]
          Length = 622

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 78/207 (37%), Gaps = 10/207 (4%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +       ++   +FSP    +A A+ D    +R+++ D R   +  +       + +  
Sbjct: 12  FRYVGHKDVVTSVQFSPLGNLLASASRD--RTVRLWIPDKRGKSSEFKAHTAP--VRSVD 67

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS++G+    +  +D+++ ++++  Q      L         A +SPD   IV  S+   
Sbjct: 68  FSADGQFLA-TASEDKSIKVWNMHRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSE--- 122

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +  +          D         ++P G  IA +  S     I  ++ +   + 
Sbjct: 123 DKTIKIWDTTNKQCVNNFSDFVGFANFVDFNPNGTCIA-SAGSDHTVKIWDIRVNKLLQH 181

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             V    +   ++ PSG  LI +    
Sbjct: 182 YQVHSGGVNCVSFHPSGNYLITASSDG 208



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 69/215 (32%), Gaps = 20/215 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ +   D         +    +    FS + Q +A A+ D      + + +  
Sbjct: 35  SASRDRTVRLWIPDKRGKSSEFKAHTAPVRSVDFSADGQFLATASEDK----SIKVWNMH 90

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R    +      +   +FS +G R ++S  +D+ + I+     +   + + N      
Sbjct: 91  RQRFLYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIW----DTTNKQCVNNFSDFVG 145

Query: 306 SAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            A+   ++P+ + I           + +     +   +  Q          + P G+ + 
Sbjct: 146 FANFVDFNPNGTCIA---SAGSDHTVKIWDIRVNKLLQHYQVHSGGVNCVSFHPSGNYLI 202

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                G    + ++     + RL+        P +
Sbjct: 203 TASSDGTLKILDLL-----EGRLIYTLQGHTGPVF 232


>gi|304404812|ref|ZP_07386473.1| 6-phosphogluconolactonase [Paenibacillus curdlanolyticus YK9]
 gi|304346619|gb|EFM12452.1| 6-phosphogluconolactonase [Paenibacillus curdlanolyticus YK9]
          Length = 362

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 70/219 (31%), Gaps = 27/219 (12%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                 + P+R            FS +G+   +     + +  Y++D    A  +L    
Sbjct: 143 QHEGRGQHPERQDRPHPHSSM--FSPDGRFVYVQDLGLDRIKKYTID---RAANQLALQS 197

Query: 302 FINISA-------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------QDK 345
            I +         ++ P +      ++ +    +   +    D   I           D 
Sbjct: 198 EIQLHPGAGPRHLAFHPTAPCAYVINEVDSTVTVLAYEQASGDLTPIQTISTLPPEGFDG 257

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSG 401
           E +  +   SP G  +  +    +   +  + +   +  ++    VE  + +    +P+G
Sbjct: 258 ENTTAEITVSPDGRFVYGSNRGHDSVVVYAVDEATGKLSVVEIVSVEGGHPRHFALTPNG 317

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             LI +  +D      ++ I+ +    T     A  S P
Sbjct: 318 SHLI-AANRD-TNNLVIFRINRDNGRITFTGNSATVSKP 354


>gi|148672040|gb|EDL03987.1| achalasia, adrenocortical insufficiency, alacrimia [Mus musculus]
          Length = 549

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 71/198 (35%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  D  D +RVY  ++ I   P      +  + A  +       L    
Sbjct: 161 AWHPHTNKFAVALLD--DSIRVYNANSTI--VPSLKHRLQRNVAALAWKPLSASVLAVAC 216

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P+   ++  S  +    + 
Sbjct: 217 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPNGGWLLSASPVD--AVIL 273

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  +  T  S   F +   +    +       
Sbjct: 274 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVLATTPS-AVFRVWEAQMWTCEAW-PTLS 331

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 332 GRCQTGCWSPDGNRLLFT 349


>gi|225556424|gb|EEH04712.1| prolyl endopeptidase [Ajellomyces capsulatus G186AR]
          Length = 671

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 14/97 (14%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKK-DGSQERLLVEDSN---- 391
             K     DPV SP G LIAF   +  K        I +++   G+  R++ EDS     
Sbjct: 45  FGKITLASDPVSSPDGKLIAFVGKTWRKLEGQPESRICLIEAIAGAVLRIVGEDSQPAPY 104

Query: 392 -LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               P +SP G  + F   + G  G + Y   L GRN
Sbjct: 105 QDIQPQFSPDGTQISFLSNRGGKGGYRCYL--LRGRN 139



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 51/156 (32%), Gaps = 33/156 (21%)

Query: 258 SMILAPRFSSNGKRALIS------VQKDEAMDIYSVDLQSNATERLTN-----TLFINIS 306
           ++   P  S +GK           ++      I  ++  + A  R+         + +I 
Sbjct: 49  TLASDPVSSPDGKLIAFVGKTWRKLEGQPESRICLIEAIAGAVLRIVGEDSQPAPYQDIQ 108

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +SPD +QI F S+R GK         G    +   +S  +  S     W      +  
Sbjct: 109 PQFSPDGTQISFLSNRGGKGGYRCYLLRGRNFGELVEVSGIETVSVEYARWHSDSAKLL- 167

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                    +G+    GS E           P+W+P
Sbjct: 168 ---------LGIAGPRGSDE---------DIPSWAP 185



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 39/292 (13%), Positives = 91/292 (31%), Gaps = 54/292 (18%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYA-----TYDDEDILRVYLMDTRIDRAPKRIGNF 256
           N+      +  +  +P  SP+ + +A+        + +   R+ L++       + +G  
Sbjct: 39  NLIEPGFGKITLASDPVSSPDGKLIAFVGKTWRKLEGQPESRICLIEAIAGAVLRIVGED 98

Query: 257 ----RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SAS 308
                   + P+FS +G +      +          L+      L     I       A 
Sbjct: 99  SQPAPYQDIQPQFSPDGTQISFLSNRGGKGGYRCYLLRGRNFGELVEVSGIETVSVEYAR 158

Query: 309 YSPDSSQIVF------ESDRE---GKEQLYVMQSNGSDQKRISQDK-------------- 345
           +  DS++++        SD +      ++     +G+ +  +  D               
Sbjct: 159 WHSDSAKLLLGIAGPRGSDEDIPSWAPEIQADSCDGTLRSLVVYDSVKEQKLHAIQFPQA 218

Query: 346 ---EASYFDP----VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS---NLQAP 395
              EA ++ P         G    F++ +     + V+      ER++        + + 
Sbjct: 219 SVWEAGWYGPSHAVAVMSDG----FSESAWYSCRVSVLDLFRGTERIIYTPPPPCQVGSV 274

Query: 396 TWSPSGRSLIFS---RKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWV 443
             S SG+   F+       G     +  +D++      L       +D  W+
Sbjct: 275 VSSKSGKYAAFTQALSNTRGKVVGIVMIVDVDSSEAWQLDVGGVDVTDVSWL 326


>gi|13991860|gb|AAK51530.1|AF363977_1 p36 LACK protein [Leishmania amazonensis]
 gi|16209602|gb|AAL14241.1| p36/LACK protein [Leishmania amazonensis]
 gi|21355057|dbj|BAC00779.1| LACK [Leishmania amazonensis]
 gi|154431138|gb|ABS82038.1| activated C kinase protein [Leishmania amazonensis]
 gi|322493363|emb|CBZ28649.1| activated protein kinase c receptor (LACK),guanine
           nucleotide-binding protein beta subunit-like protein
           [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 312

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 12/167 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + D R  +  ++       +LA  FS +  R ++S  +D  + +++V  +       
Sbjct: 88  SIRMWDLRNGQCQRKFLKHTKDVLAVAFSPD-DRLIVSAGRDNVIRVWNVAGECMHEFLR 146

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            +      S  +SP     +  S       + V   NG   +R  +           SP 
Sbjct: 147 DSHEDWVSSICFSPSLEHPIVVSG-SWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPD 205

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPS 400
           G L A     G+  A  +      +   L +  N+++P     +SP+
Sbjct: 206 GSLCA---SGGKDGAALLWDLSTGE--QLFK-INVESPINQIAFSPN 246



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 17/163 (10%)

Query: 163 YQSITGEKGDFNSRILFV----SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           ++ +     D+ S I F        VVSG   N++ V + +G             +    
Sbjct: 142 HEFLRDSHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVT 201

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+    A             L D        +I N  S I    FS N     ++ ++
Sbjct: 202 VSPDGSLCA----SGGKDGAALLWDLSTGEQLFKI-NVESPINQIAFSPNRFWMCVATER 256

Query: 279 DEAMDIYSVDLQSNATE-RLTNT---LFINISASYSPDSSQIV 317
                +   DL+S A    LT         IS ++S D + + 
Sbjct: 257 S----LSVYDLESKAVIAELTPDGAKPSECISIAWSADGNTLY 295


>gi|258405154|ref|YP_003197896.1| hypothetical protein Dret_1030 [Desulfohalobium retbaense DSM 5692]
 gi|257797381|gb|ACV68318.1| conserved hypothetical protein [Desulfohalobium retbaense DSM 5692]
          Length = 419

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 74/250 (29%), Gaps = 29/250 (11%)

Query: 175 SRILFVSESVVSGIIKNSLC--VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +     + + V+  ++++L    +  DG             ++EP F P    V      
Sbjct: 194 TPTFDATGTHVAAQVRHTLYDYTIAVDGKPWAQTFN----AVWEPTFHPQTGAVLAPVRH 249

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                              ++   +       FS +G+R              +VD  + 
Sbjct: 250 GGAWGLAQDGQFIWQPRYAQLWKLQ-------FSPDGQRVAAVCAPRYGHWTVTVD-DTP 301

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L   +       +SPDS +I        + ++ V  +                + P
Sbjct: 302 WHTELNQFI---TDLRWSPDSQRIGVIGKEGNRWKILVDDTE-------WPGDYDMTWAP 351

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           V+SP    +A       K+    +  +G   +   +   L  P +SP G  L+    +  
Sbjct: 352 VFSPDSQNVAAKVEQNGKY---TVLLNGKAYKEEFDG--LWDPVFSPDGTHLLLRAMRGT 406

Query: 413 DTGSKLYSID 422
           +    +  I 
Sbjct: 407 NYHRIVVPIS 416



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/265 (16%), Positives = 88/265 (33%), Gaps = 37/265 (13%)

Query: 166 ITGEKGDFNSRILFVSESVVSG--IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +   KG+ ++ +  V     +     +N    +  +G     +  +     + P F    
Sbjct: 146 VFSPKGNASAAVAQVQSFGQADIFTFQNGCFTVAVNGEPWDSVFVN----AWTPTFDATG 201

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             VA         +R  L D  I    K      + +  P F      A+++  +     
Sbjct: 202 THVA-------AQVRHTLYDYTIAVDGKPWAQTFNAVWEPTFHPQ-TGAVLAPVRHGGAW 253

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIV-FESDREGKEQLYVMQSNGSDQKRIS 342
             + D Q     R      +     +SPD  ++    + R G    + +  + +      
Sbjct: 254 GLAQDGQFIWQPRYAQLWKLQ----FSPDGQRVAAVCAPRYGH---WTVTVDDTPWH--- 303

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSG 401
            +      D  WSP    I      G ++ I V   +         D ++  AP +SP  
Sbjct: 304 TELNQFITDLRWSPDSQRIGVIGKEGNRWKILVDDTE------WPGDYDMTWAPVFSPDS 357

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGR 426
           +++    +++G      Y++ LNG+
Sbjct: 358 QNVAAKVEQNGK-----YTVLLNGK 377



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 82/241 (34%), Gaps = 31/241 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
               +  + + EP  SP+ Q+VA      E    + +  T  +    RI         PR
Sbjct: 18  STCTADSEWIEEPIVSPDGQRVASVVKLGEFEFGLSVNGTPWETTFDRI-------WYPR 70

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F+ +G+   I+ Q++E    +++ ++    E    T        +S D + +     ++ 
Sbjct: 71  FTPDGRLTAITQQEEE----WTISIEGTPWE---ETYGFVWQTMFSEDGAHVAAAVQQD- 122

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q Y +  +G     + ++   +  D V+SP+G+  A            +         
Sbjct: 123 -MQFYGVTVDGK----VWENMFEAATDFVFSPKGNASAAVAQVQSFGQADIFTFQNGCFT 177

Query: 385 LLVEDS-------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           + V          N   PT+  +G  +              Y+I ++G+         + 
Sbjct: 178 VAVNGEPWDSVFVNAWTPTFDATGTHVA----AQVRHTLYDYTIAVDGKPWAQTFNAVWE 233

Query: 438 S 438
            
Sbjct: 234 P 234


>gi|224052753|ref|XP_002197117.1| PREDICTED: TBP-associated factor 5 [Taeniopygia guttata]
          Length = 783

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 60/170 (35%), Gaps = 16/170 (9%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS---NATERL 297
           +MD +     K +      +    FS +    L S  +D  + ++S+   +         
Sbjct: 510 IMDEKTASELKILYGHSGPVYGTSFSPDRNYLL-SCSEDGTVRLWSLQTFTCLVGYKGH- 567

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSP 356
            N    +    +SP      F S   G +++  + + +     RI     A      + P
Sbjct: 568 -NYPVWDTQ--FSPYG--YYFVS--GGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHP 620

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
             + IA T  +     +  +  +G+  R+       + +  +SP+GR L 
Sbjct: 621 NSNYIA-TGSADRTIRLWDV-LNGNCVRIFTGHKGPIHSLAFSPNGRFLA 668



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 71/213 (33%), Gaps = 12/213 (5%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD   A+   +       ++   FSP++  +   + D    +R++ + T       + 
Sbjct: 509 RIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSED--GTVRLWSLQTFTCLVGYKG 566

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            N+   +   +FS  G    +S   D    +++ D            L       + P+S
Sbjct: 567 HNYP--VWDTQFSPYG-YYFVSGGHDRVARLWATDH-YQPLRIFAGHLADVTCTRFHPNS 622

Query: 314 SQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           + I   S DR     + +      +  RI    +       +SP G  +A T  +  +  
Sbjct: 623 NYIATGSADRT----IRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLA-TGATDGRVL 677

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +  +        L      + A  +S  G  L 
Sbjct: 678 LWDIGHGLMVGELKGHTDTIYALRFSRDGEILA 710



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 568 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 623

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 624 YIATGSADRTIRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDG----RVLLW 679

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      I A RFS +G   L S   D  + ++
Sbjct: 680 DIGHGLMVGELKGHTDTIYALRFSRDG-EILASGSMDNTVRLW 721


>gi|74222348|dbj|BAE38086.1| unnamed protein product [Mus musculus]
          Length = 606

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 76/257 (29%), Gaps = 55/257 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + + D   I  +       +   +++P+   +A  + D    LR++    +       
Sbjct: 40  VILRNIDNPAIADIYTEHAHQVVVAKYAPSGFYIA--SGDISGKLRIWDTTQKEHLLKYE 97

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK--------------------DEAMDIYSVDLQSN 292
              F   I    ++ + KR  +  +                          I SVD++  
Sbjct: 98  YQPFAGKIKDIAWTVDSKRIAVVGEGREKFGAVFLWDTGSSVGEITGHNKVINSVDIKQT 157

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RL      N +A +             EG    +              D        
Sbjct: 158 RPYRLATGSDDNCAAFF-------------EGPPFKFKFTIG---------DHSRFVNCV 195

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFS 407
            +SP G+  A     G    I +      ++          D  + A +WSP    L+  
Sbjct: 196 RFSPDGNRFATASADG---QIFIYDGKTGEKVCALGESKAHDGGIYAISWSPDSTHLL-- 250

Query: 408 RKKDGDTGSKLYSIDLN 424
               GD  SK++ +++N
Sbjct: 251 -SASGDKTSKIWDVNVN 266



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 72/215 (33%), Gaps = 36/215 (16%)

Query: 108 AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
           A  +V  +    G       +  + R+WD   ++ ++  ++       + IA T+     
Sbjct: 58  AHQVVVAKYAPSGFYIASGDISGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTVDSKRI 117

Query: 164 QSITGEKGDFNSRILFVSESVV---------------SGIIKNSLCVMDRD-------GA 201
             +   +  F +  L+ + S V                      L     D       G 
Sbjct: 118 AVVGEGREKFGAVFLWDTGSSVGEITGHNKVINSVDIKQTRPYRLATGSDDNCAAFFEGP 177

Query: 202 NIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-- 257
             ++     D   F    RFSP+  + A A+ D     ++++ D +       +G  +  
Sbjct: 178 PFKFKFTIGDHSRFVNCVRFSPDGNRFATASADG----QIFIYDGKTGEKVCALGESKAH 233

Query: 258 -SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              I A  +S +    L S   D+   I+ V++ S
Sbjct: 234 DGGIYAISWSPDSTHLL-SASGDKTSKIWDVNVNS 267


>gi|46138935|ref|XP_391158.1| hypothetical protein FG10982.1 [Gibberella zeae PH-1]
          Length = 779

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 74/209 (35%), Gaps = 38/209 (18%)

Query: 254 GNFRSMILAPRFSS---NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY- 309
              R   ++  +SS   +G   +  +  D  + +  + L    T+ +T          Y 
Sbjct: 46  AKLRPSSISVDWSSAGGDGNYIV--LSDDGDLVLEDI-LSEKTTKFVTADKLPKDLHEYW 102

Query: 310 -SPDSSQIVFESDREGKEQL------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            S D+ +++  S+   + +       +V+     + + +  ++        ++P GD +A
Sbjct: 103 ISGDAKKVLVASNYTKQYRYSYFADYFVLDVESGESEPLVDNQVGDIQYAQFAPNGDAVA 162

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDS---NLQAP---------------TWSPSGRSL 404
           F + +     + + + DG  +++  +         P                WSP  + +
Sbjct: 163 FVRDND----LFIRRSDGKVDQITSDGGPDMFHGVPDWVYEEEIYGGRSALWWSPDSKFI 218

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            F      +TG   ++I     NE +  T
Sbjct: 219 AFLSF--NETGVGTFTIPYYMDNEKVAPT 245



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 50/154 (32%), Gaps = 29/154 (18%)

Query: 204 RYLTPSRDQILFEPRF-SPNQQKVAYATYDDEDILRVY-----LMDTRIDRAPKRIGNFR 257
           +++T  +        + S + +KV  A+   +     Y     ++D     +   + N  
Sbjct: 87  KFVTADKLPKDLHEYWISGDAKKVLVASNYTKQYRYSYFADYFVLDVESGESEPLVDNQV 146

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---------- 307
             I   +F+ NG        +D  + I   D      +++T+    ++            
Sbjct: 147 GDIQYAQFAPNGDAVAFV--RDNDLFIRRSD---GKVDQITSDGGPDMFHGVPDWVYEEE 201

Query: 308 --------SYSPDSSQIVFESDREGKEQLYVMQS 333
                    +SPDS  I F S  E     + +  
Sbjct: 202 IYGGRSALWWSPDSKFIAFLSFNETGVGTFTIPY 235



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 49/126 (38%), Gaps = 4/126 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFS 367
           S + S  V  +D++G   +Y+   NG +  +++  +              L+ F  +K  
Sbjct: 356 SGNGSYYVDVNDQDGWNHIYLYPVNGGEAIQLTSGEWEVSTILNIDTAEKLVYFQASKRH 415

Query: 368 GEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             +  +  +  +  +   LV+DS     + ++S SG   I   +       +LY+ +   
Sbjct: 416 STERHVYKVSWETKKLTPLVDDSVPGYWSASFSSSGGYYILHYQGPDVPYQELYTSNSTS 475

Query: 426 RNETLI 431
           +    +
Sbjct: 476 KPVRTL 481


>gi|303247202|ref|ZP_07333476.1| YD repeat protein [Desulfovibrio fructosovorans JJ]
 gi|302491361|gb|EFL51249.1| YD repeat protein [Desulfovibrio fructosovorans JJ]
          Length = 959

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 70/213 (32%), Gaps = 23/213 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +    +  L+    SP+ + V    +  Y  +    +Y+ +    R  KR+    S+I  
Sbjct: 84  IGHGYEGRLYSVAMSPDGRYVFCGGWTGYGWDKTHSIYIFERETGRMVKRLTGLPSVINH 143

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSPDSSQIVFES 320
              S +G      + ++        DL                +  A++  D    +  +
Sbjct: 144 LAVSHDGAYLAAVMGEEGVRVWRLSDLSLVGGDK----AYGGESYGAAF--DGKGHLATT 197

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             +G  +LY +          ++ +  S  F   +SP G  +A     G      V   D
Sbjct: 198 CYDGAIRLYKVTDTSLSLVAKTRTQGGSRPFSLAFSPDGTQLAV----GFTDTAAVTVLD 253

Query: 380 GSQERLL-------VEDSNLQAPTWSPSGRSLI 405
                LL       V++ NL +  ++  G  L 
Sbjct: 254 AETLNLLGAPNLTGVDNGNLASVAFAADGSLLA 286



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 58/438 (13%), Positives = 110/438 (25%), Gaps = 119/438 (27%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            +  G     G D+      +++ +  + +  K+    P+    +A +       ++ GE
Sbjct: 103 YVFCGGWTGYGWDKTH-SIYIFERETGRMV--KRLTGLPSVINHLAVSHDGAYLAAVMGE 159

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP------------ 217
           +G    R+  +S                 DG      T     I                
Sbjct: 160 EGVRVWRLSDLSLVGGDKAYGGESYGAAFDGKGHLATTCYDGAIRLYKVTDTSLSLVAKT 219

Query: 218 -----------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                       FSP+  ++A    D   +  +      +  AP   G     + +  F+
Sbjct: 220 RTQGGSRPFSLAFSPDGTQLAVGFTDTAAVTVLDAETLNLLGAPNLTGVDNGNLASVAFA 279

Query: 267 SNGKRAL---ISVQKD-------EAMDIYSVDLQSNATERLTNTLFIN-------ISASY 309
           ++G           +         A  +   DL +     +T     +       ++  +
Sbjct: 280 ADGSLLAAGRWVTDRGCPVRRFKPADFVAYQDLDTGKAAVVTICPLPDGGLAYGTVAPRW 339

Query: 310 S---PDSS-----QIV----------FESDREG---------KEQLYVMQSNGSDQKRIS 342
               PD S                  F  DR G         ++ LY     G D ++I 
Sbjct: 340 GVLRPDGSFGMTRSPAIRDYRASARRFYLDRTGETVAYDATPQKGLYRFALPGRDLRQID 399

Query: 343 QDKEA-----------------------------------SYFDPVWSPQGDLIAFTKFS 367
                                                   + +    +P G  +      
Sbjct: 400 APTPGMTAPRTQAPGLVVTGWEGGRTPQLNGKPLALKEFETAYSLAIAPDGRRLIL---- 455

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKL 418
           G  + +     DG           + A   S  GR +          + R +DG      
Sbjct: 456 GTAWNVRAYGADGRPLWQTPAPDTVWAVNVSGDGRVVAAAMGDGSIRWYRMEDGREILS- 514

Query: 419 YSIDLNGRNETLINTPAY 436
           Y  + +GR   L     Y
Sbjct: 515 YFPNADGRRWVLWTPSGY 532


>gi|19113367|ref|NP_596575.1| hira protein, histone chaperone Hip1 [Schizosaccharomyces pombe
           972h-]
 gi|3023951|sp|P87314|HIR1_SCHPO RecName: Full=Protein hir1; AltName: Full=Histone transcription
           regulator 1 homolog
 gi|2226424|emb|CAB10089.1| hira protein, histone chaperone Hip1 [Schizosaccharomyces pombe]
          Length = 932

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 78/243 (32%), Gaps = 48/243 (19%)

Query: 203 IRYLTPSRDQILFEPRFS----PNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPK 251
           I +L    D+      FS    P+  ++A          +  E I R    +   +  PK
Sbjct: 6   IPWLGHFDDRGHRLSIFSIHIHPDGSRIATGGLDGTIRIWSTEAINRENENENENEDLPK 65

Query: 252 RI---GNFRSMILAPRFSSNGKRALISVQKDEAMDIY----SVDLQS------------- 291
           ++         + + RFS NG+    S   D  + I+    ++                 
Sbjct: 66  QLCCMSTHTGTVTSVRFSPNGQYLA-SGSDDRVVIIWHKEEAIPGLGSTFGSGEKHTENW 124

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            +  RL           +S DS  +V          + V    G+  +R+ + +      
Sbjct: 125 RSYRRLLGHDNDIQDLCWSYDSQLVV---SVGLDSSIIVWN--GTTFERLKRIEAHQSHV 179

Query: 352 PVWS--PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-------LQAPTWSPSGR 402
              +  P G   A T+       +  +  D S E+ +    N        + P+WSP G+
Sbjct: 180 KGITFDPAGKYFA-TESDDRTIKVWRVS-DFSIEKTITGPFNNSPLSTYFRRPSWSPDGK 237

Query: 403 SLI 405
            + 
Sbjct: 238 HIA 240


>gi|326433245|gb|EGD78815.1| guanine nucleotide binding protein [Salpingoeca sp. ATCC 50818]
          Length = 312

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 65/194 (33%), Gaps = 8/194 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  + +   S + Q     ++D      + L +    +  +R       +L+  FS
Sbjct: 60  LRGHSHTVSDVVISSDGQFALSGSWDH----TMRLWEIATGKCKRRFIGHEKDVLSVAFS 115

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            + ++ ++S  +D+ + +++V  +     R  N         +SPD+S  +  S      
Sbjct: 116 PDNRQ-VVSASRDKTIRLWNVLAECKYVIRENNHSEWISCVRFSPDTSNPIIVSC-GWDN 173

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           ++ V        K  +            SP G L A     G+     +   D      L
Sbjct: 174 KVKVWNLTDCRLKCNNIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDL--TDSRHLSTL 231

Query: 387 VEDSNLQAPTWSPS 400
                + A  +SP+
Sbjct: 232 DAKDMINALVFSPN 245



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 54/277 (19%), Positives = 109/277 (39%), Gaps = 44/277 (15%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           + R  +HT+SD +  S     G F           +SG   +++ + +      +     
Sbjct: 59  ALRGHSHTVSDVVISS----DGQFA----------LSGSWDHTMRLWEIATGKCKRRFIG 104

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSN 268
            ++ +    FSP+ ++V  A+ D      + L +   + +   R  N    I   RFS +
Sbjct: 105 HEKDVLSVAFSPDNRQVVSASRDK----TIRLWNVLAECKYVIRENNHSEWISCVRFSPD 160

Query: 269 GKR-ALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGK 325
                ++S   D  + ++  +L     +   + +T ++N   + SPD S         G 
Sbjct: 161 TSNPIIVSCGWDNKVKVW--NLTDCRLKCNNIGHTGYLNTV-TVSPDGSLCA-----SGG 212

Query: 326 EQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +    M  + +D + + + D +      V+SP    +     +G    I     +  +  
Sbjct: 213 KDGQAMLWDLTDSRHLSTLDAKDMINALVFSPNRYWL--CAAAGPAVKIW--DLETKELV 268

Query: 385 -LLVEDS--NLQAPT-----WSPSGRSLIFSRKKDGD 413
             LV++S  + +APT     WSP G++L F+   D +
Sbjct: 269 HELVDESEESAKAPTCLSLAWSPDGQTL-FAGYSDNN 304


>gi|298246282|ref|ZP_06970088.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297553763|gb|EFH87628.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 642

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 50/346 (14%), Positives = 105/346 (30%), Gaps = 78/346 (22%)

Query: 93  NPDSIPRFQDWNS------LGAQVLVTGRVIKEGKDRLRVEFR-------LWDVKDRKQI 139
               I  +  W S      + A+ +  G+V  +G+D   +E R       +  V+     
Sbjct: 2   TKPQIAPYGAWASPITTDMIVAKAVRRGQVQIQGQDTYWLEVRPEEGGRGVI-VRQGADG 60

Query: 140 IGKKFFSSPASWRKIAHTIS--DDIYQSITGEKGDFNSRILFVSESVV------------ 185
           + +    +P + R   H     D I    T    +F+ + L+                  
Sbjct: 61  VTQDITPAPFNARTRVHEYGGGDYIVHENTVYFANFSDQRLYRQPLGGEPEPLTEPGNKR 120

Query: 186 ------SGIIKNSLCVMD-----------------RDGANIRYLTPSRDQILFEPRFSPN 222
                  G  +  LCV +                  DG+   +   + +     PR SP+
Sbjct: 121 YADLIIDGQRQRLLCVCEDHTNTQREAVNTLVSIALDGSGSVHTLVAGNDFYSTPRLSPD 180

Query: 223 QQKVAYATYDDE----DILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRALI 274
           + ++ + T++      D   +++ +   +          G     I  P +S +G     
Sbjct: 181 KTRLCWLTWNHPNMPWDGTELWVGELDANGFVSYAQYVAGGASESIFQPAWSPDGT-LYF 239

Query: 275 SVQKDEAMDIYSVDLQSNAT----------ERLTNTLFINISASYSPDSSQIVFESDREG 324
              +    ++Y +  +S              + T +      AS    + ++V    + G
Sbjct: 240 VSDRSGWWNLYRLKGESIEAICPMEAEFGRPQWTFSTSTYDFAS----AERLVCIYGQNG 295

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            + L ++         I      S   P  S   + + F   S  +
Sbjct: 296 -DHLGIIDLKTGALTEIETL-YTSLGAPAIS--SERVVFIAGSPTQ 337



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 41/132 (31%), Gaps = 15/132 (11%)

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVM 376
           RE    L  +  +GS            Y  P  SP    + +  ++          + V 
Sbjct: 145 REAVNTLVSIALDGSGSVHTLVAGNDFYSTPRLSPDKTRLCWLTWNHPNMPWDGTELWVG 204

Query: 377 KKDGSQER---LLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           + D +        V     ++   P WSP G  L F   + G     LY +      E +
Sbjct: 205 ELDANGFVSYAQYVAGGASESIFQPAWSPDGT-LYFVSDRSG--WWNLYRLKGE-SIEAI 260

Query: 431 INTPAYASDPQW 442
               A    PQW
Sbjct: 261 CPMEAEFGRPQW 272


>gi|296206547|ref|XP_002750245.1| PREDICTED: WD repeat-containing protein 8 [Callithrix jacchus]
          Length = 460

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 82/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L V D +   I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVVRDVNTLQIVQLYTCLDQI-QHIEWSADSLFIL-CAMYKRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACLQGTTF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + +   +     R             W+P G ++A    +  
Sbjct: 142 TRDGRYMALAERRDCKDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-VWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKKD 411
           ++ + +   DG   RLL   S  +      +  WSPS + L       
Sbjct: 201 EYKVLLYSLDG---RLLSAYSAYEWSLGIKSVAWSPSSQFLAVGSYDG 245



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 52/157 (33%), Gaps = 9/157 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK     VQ      +   D+ +    +L   L       +S DS  I+    + G
Sbjct: 16  FSPDGKYLASCVQ----YRLVVRDVNTLQIVQLYTCLDQIQHIEWSADSLFILCAMYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++    +      +  A      WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSVS 127

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +       Q  T++  GR +  + ++D      ++ 
Sbjct: 128 YIKYPKACLQGTTFTRDGRYMALAERRDCKDYVSIFV 164


>gi|301089297|ref|XP_002894962.1| actin-related protein 2/3 complex subunit, putative [Phytophthora
           infestans T30-4]
 gi|262104480|gb|EEY62532.1| actin-related protein 2/3 complex subunit, putative [Phytophthora
           infestans T30-4]
          Length = 390

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 73/229 (31%), Gaps = 34/229 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRV--YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            ++ ++ K+A     +E  +    +  +    R    +     ++    +S    + + S
Sbjct: 19  AWNKDRSKLAICPNSNEIWIYSGCHAPNPSQWRKEAVLTEHDMLVCGLDWSPVHDQLV-S 77

Query: 276 VQKDEAMDIYSVDLQSNATE------RLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              D +  ++  +      +      R+T       +  +SPD  +    S  +     Y
Sbjct: 78  CSHDRSAFVWKYEAAYRQWKPLLVVLRITRAA---TNVKWSPDGKKFAVSSGAKCVSVCY 134

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLV 387
              +      +I +  +++  D  W P   L+           F+  +   DG  +    
Sbjct: 135 YQAAENWWVSKIIKKHKSTVTDLDWHPNSQLLVTASTDLKCRVFSAHISDIDGPPDAGPF 194

Query: 388 E---------------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           E                + + A  WSP G  L F+       GS ++ +
Sbjct: 195 EALPPFGEPLAEFDNASAWVNAVAWSPKGNRLAFA-----GQGSSIHIV 238



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 19/188 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    D ++    +SP   ++   ++D    +  Y    R  +    +          ++
Sbjct: 55  VLTEHDMLVCGLDWSPVHDQLVSCSHDRSAFVWKYEAAYRQWKPLLVVLRITRAATNVKW 114

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI-------- 316
           S +GK+  +S         Y    ++    ++            + P+S  +        
Sbjct: 115 SPDGKKFAVSSGAKCVSVCYYQAAENWWVSKIIKKHKSTVTDLDWHPNSQLLVTASTDLK 174

Query: 317 --VFE---SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             VF    SD +G      +       +      +  A      WSP+G+ +AF    G+
Sbjct: 175 CRVFSAHISDIDGPPDAGPFEALPPFGEPLAEFDNASAWVNAVAWSPKGNRLAFA---GQ 231

Query: 370 KFAIGVMK 377
             +I ++ 
Sbjct: 232 GSSIHIVH 239


>gi|76156138|gb|AAX27370.2| SJCHGC05548 protein [Schistosoma japonicum]
          Length = 313

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 61/179 (34%), Gaps = 19/179 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                +  +   ++ PN + +A  + D      + + D   DR    +      I   ++
Sbjct: 143 TFQGHENEVNAIKWDPNGRLLASCSDDM----TLKVWDMHHDRCVHDLRGHTKEIYTIKW 198

Query: 266 SSNGKRALI--------SVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQI 316
           S  G             S   D  + ++  D+++    R L+       S ++SPD   +
Sbjct: 199 SPTGPGTAFANAPLCLASASFDSTVRLW--DVETGQCRRILSRHTEPVYSVAFSPDGRLL 256

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              S     + +++   +  +    S       F+  W+ +GD +  +   G    + +
Sbjct: 257 ATGSF---DQCVHIWNVDSGNLIN-SYQGTGGIFEVCWNSRGDKVGASASDGSVVVLDL 311



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 18/136 (13%), Positives = 43/136 (31%), Gaps = 9/136 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-----DDEDILRVYLMDTRI 246
           +L V D       +      + ++  ++SP     A+A              V L D   
Sbjct: 171 TLKVWDMHHDRCVHDLRGHTKEIYTIKWSPTGPGTAFANAPLCLASASFDSTVRLWDVET 230

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +  + +      + +  FS +G+    +   D+ + I+  ++ S               
Sbjct: 231 GQCRRILSRHTEPVYSVAFSPDGRLLA-TGSFDQCVHIW--NVDSGNLINSYQGTGGIFE 287

Query: 307 ASYSPDSSQI-VFESD 321
             ++    ++    SD
Sbjct: 288 VCWNSRGDKVGASASD 303



 Score = 43.1 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 46/159 (28%), Gaps = 25/159 (15%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-------DLQ 290
            +++         K      + + A ++  NG+    S   D  + ++ +       DL+
Sbjct: 129 NIHVCQLGCSSPVKTFQGHENEVNAIKWDPNGRLLA-SCSDDMTLKVWDMHHDRCVHDLR 187

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQD 344
            +  E  T          +SP      F       +       + +        +RI   
Sbjct: 188 GHTKEIYTI--------KWSPTGPGTAFANAPLCLASASFDSTVRLWDVETGQCRRILSR 239

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                +   +SP G L+A   F      + +   D    
Sbjct: 240 HTEPVYSVAFSPDGRLLATGSFDQ---CVHIWNVDSGNL 275



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/246 (14%), Positives = 74/246 (30%), Gaps = 24/246 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G       V + DG  +          +F  +++     +  A  D             
Sbjct: 41  TGSYDGFARVWNTDG-RLATTLGQHKGPIFALKWNKKGNYILTAGVDK--------TTII 91

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +    RI    +  +AP    + +            +I+   L  ++  +        +
Sbjct: 92  WEAQTGRIAQQFAFHVAPTLDVDWQSLDSFASCSTDTNIHVCQLGCSSPVKTFQGHENEV 151

Query: 306 SA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +A  + P+   +   SD      L V   +        +      +   WSP G   AF 
Sbjct: 152 NAIKWDPNGRLLASCSD---DMTLKVWDMHHDRCVHDLRGHTKEIYTIKWSPTGPGTAFA 208

Query: 365 K----FSGEKFA--IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGS 416
                 +   F   + +   +  Q R ++      + +  +SP GR L        D   
Sbjct: 209 NAPLCLASASFDSTVRLWDVETGQCRRILSRHTEPVYSVAFSPDGRLLA---TGSFDQCV 265

Query: 417 KLYSID 422
            ++++D
Sbjct: 266 HIWNVD 271


>gi|109391151|gb|ABG33844.1| lissencephaly protein 1-like [Chlamydomonas reinhardtii]
          Length = 347

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 72/204 (35%), Gaps = 14/204 (6%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           ++        +    FSP+     +      D   V + D +            + + A 
Sbjct: 49  KHTLKGHADSVTSLCFSPDS----FLLASGSDDNTVRMWDVQSGNLRTIFTGHNAKVHAL 104

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            F  +G   L SV KD  +  + + L+      L            S DS +I+  S   
Sbjct: 105 NFIGSGT-ILFSVSKDRTIIEWDL-LRGILRMTLEGHAAPVYGVCVSKDSQKIITCSH-- 160

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E + V +    + ++  +   ++ +  V SP G L+A          + V +    + 
Sbjct: 161 -DETIRVWEIMKGNLQKTVKAHTSTVYSVVLSPDGKLLATASADKT---VKVWELGTGEL 216

Query: 384 R--LLVEDSNLQAPTWSPSGRSLI 405
           +  L+   S++    ++P G+ L+
Sbjct: 217 KDTLIGHTSHVVGVAFTPDGKKLL 240



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 49/135 (36%), Gaps = 9/135 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N++    +    ++    SP+ + +A A+ D      V + +         +    S +
Sbjct: 172 GNLQKTVKAHTSTVYSVVLSPDGKLLATASADK----TVKVWELGTGELKDTLIGHTSHV 227

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
           +   F+ +GK+ L S   DE +  +  D+++       T           +PD     F 
Sbjct: 228 VGVAFTPDGKKLL-SSGWDETIKCW--DVETGEVLHTFTGHQGKVHCVCTAPDGDTF-FS 283

Query: 320 SDREGKEQLYVMQSN 334
              +   +L+ + + 
Sbjct: 284 GGEDKTIKLWRISTG 298


>gi|52345880|ref|NP_001004988.1| POC1 centriolar protein homolog B [Xenopus (Silurana) tropicalis]
 gi|49523068|gb|AAH75548.1| MGC89488 protein [Xenopus (Silurana) tropicalis]
          Length = 379

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 65/176 (36%), Gaps = 11/176 (6%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D A  R+    +D + +   FSP+ +++A ++ D      V + + +      +    + 
Sbjct: 7   DPALQRHFKGHKDAVTYV-DFSPDGKQLASSSAD----ACVMIWNFKPQSRAYKYPGHKE 61

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            +   +FS +G   + S  KD  + +++ +++   +  L     +    ++S D    + 
Sbjct: 62  AVTCVQFSPSG-HLVASSSKDRTVRLWAPNIK-GESSVLKAHTAVVRCVNFSSDGHTFIT 119

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            SD    + +     +         +         +SP G LIA      +   I 
Sbjct: 120 ASD---DKSIKAWNLHRQRFLYSLTEHTNWVRCARFSPDGRLIASCS-DDKTVRIW 171



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 57/167 (34%), Gaps = 9/167 (5%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             +  +    FS +GK+   S   D  + I++   QS A +   +   +     +SP   
Sbjct: 16  GHKDAVTYVDFSPDGKQLA-SSSADACVMIWNFKPQSRAYKYPGHKEAV-TCVQFSPSG- 72

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +V  S ++   +L+     G     + +   A      +S  G     T    +     
Sbjct: 73  HLVASSSKDRTVRLWAPNIKGESS--VLKAHTAVVRCVNFSSDGHTFI-TASDDKSIKAW 129

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + +      L    + ++   +SP GR +        D   +++ I
Sbjct: 130 NLHRQRFLYSLTEHTNWVRCARFSPDGRLIASCSD---DKTVRIWDI 173



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 63/200 (31%), Gaps = 31/200 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS +      A+ D      +   +    R    +    + +   RFS +G+    S  
Sbjct: 109 NFSSDGHTFITASDDK----SIKAWNLHRQRFLYSLTEHTNWVRCARFSPDGRLIA-SCS 163

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF------ESDREGKEQLYVM 331
            D+ + I+           +TN L IN    Y   S+ + F       +       + V 
Sbjct: 164 DDKTVRIWD----------ITNRLCINTFVDYKGHSNYVDFNPMGTCVASAGVDSTVKVW 213

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
               +   +  Q   A      + P G+ +      G    + ++     + RL+     
Sbjct: 214 DIRTNKLLQHYQVHNAGVNSLSFHPSGNYLLTASNDGTVKILDLL-----EGRLIYTLHG 268

Query: 392 LQAPTWSPSGRSLIFSRKKD 411
            Q P  S     + FS+  D
Sbjct: 269 HQGPVLS-----VAFSKSGD 283


>gi|311272266|ref|XP_003133375.1| PREDICTED: WD repeat-containing protein 17 [Sus scrofa]
          Length = 1070

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 70/197 (35%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P +   +A AT  +      ++ D 
Sbjct: 159 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGDLNCIAGATSRNG----AFIWDI 214

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R   + ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 215 KKGKMVQRFNEHGKNGIFCISWSHKDSKRIA-TCSGDGYCVIRTID--GKVLHKY-KHPA 270

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y M ++     ++        F   WSP  + I 
Sbjct: 271 AVFGCDWSQNNKDMIATGCEDKNVRVYYMATSSDQPLKVFSGHTEKVFHVRWSPLREGIL 330

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 331 CSGSDDGSVRIWDYTQD 347


>gi|302562302|ref|ZP_07314644.1| secreted protein [Streptomyces griseoflavus Tu4000]
 gi|302479920|gb|EFL43013.1| secreted protein [Streptomyces griseoflavus Tu4000]
          Length = 397

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 91/303 (30%), Gaps = 41/303 (13%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF---SPNQQKVAYATY 231
            R L +     +      + +   D  + R         + +P +    P+ + +     
Sbjct: 57  PRPLLLGTYTSADGGGEGIGLAAYDPESGRIAGSGALTGVADPSYLTVHPDGRTLYAVNE 116

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVD 288
            D+  +    +  R     K +G+  S   AP       +G+  L +     ++ ++ +D
Sbjct: 117 RDDGAVTAVRLSDR-----KVLGSRSSGGAAPCHLSVHPDGRYLLSANYGSGSVAVHPID 171

Query: 289 LQS--NATERLTNTLFINISASY----------SPDSSQIVFESDREGKEQLYVMQSNG- 335
                     L                      SPD   ++      G + +Y  + +  
Sbjct: 172 ASGALGERTELVTHSGPPPGPGQRGPHAHQFLTSPDGGHVLAV--DLGTDTVYTYRLDEA 229

Query: 336 ----SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-----L 386
               ++  R S    A      + P G          +  A+        + R+      
Sbjct: 230 AGTLTETARASTRPGAGPRHLTFHPGGRYAYLANEVDDTVAVCAYDPGSGRLRIGAPQST 289

Query: 387 VEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQW 442
              +    P     + +GR   +   + GD     Y+++ +G    L++T P     P+ 
Sbjct: 290 GTGAGTSYPAQILVTGNGRF-AYLANR-GDNSLTRYAVEADGARLRLLDTVPVGGDFPRQ 347

Query: 443 VGF 445
           + F
Sbjct: 348 IAF 350



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 44/331 (13%), Positives = 86/331 (25%), Gaps = 52/331 (15%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           L+ G           +    +D +  +                    ++D  Y ++    
Sbjct: 60  LLLGTYTSADGGGEGIGLAAYDPESGRIAGSGALTG-----------VADPSYLTVHP-- 106

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF---SPNQQKVA 227
              + R L+       G +     V   D    R +  SR      P      P+ + + 
Sbjct: 107 ---DGRTLYAVNERDDGAVT---AVRLSD----RKVLGSRSSGGAAPCHLSVHPDGRYLL 156

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--------APRF--SSNGKRALISVQ 277
            A Y    +    +  +        +                A +F  S +G   L    
Sbjct: 157 SANYGSGSVAVHPIDASGALGERTELVTHSGPPPGPGQRGPHAHQFLTSPDGGHVLAVDL 216

Query: 278 KDEAMDIYSVDLQSNATERL----TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             + +  Y +D  +          T         ++ P        ++ +    +     
Sbjct: 217 GTDTVYTYRLDEAAGTLTETARASTRPGAGPRHLTFHPGGRYAYLANEVDDTVAVCAYDP 276

Query: 334 NGSDQKRISQDKEASYFDPVWSP-------QGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            GS + RI   +          P        G                 ++ DG++ RLL
Sbjct: 277 -GSGRLRIGAPQSTGTGAGTSYPAQILVTGNGRFAYLANRGDNSLTRYAVEADGARLRLL 335

Query: 387 -VEDSNLQAP---TWSPSGRSLIFSRKKDGD 413
                    P    +SP G  L  + ++ GD
Sbjct: 336 DTVPVGGDFPRQIAFSPDGALLFAANQRSGD 366



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 58/178 (32%), Gaps = 15/178 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALISV 276
           SP+   V        D +  Y +D       +           PR   F   G+ A ++ 
Sbjct: 205 SPDGGHVLAVDLGT-DTVYTYRLDEAAGTLTETARASTRPGAGPRHLTFHPGGRYAYLAN 263

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP-------DSSQIVFESDREGKEQL- 328
           + D+ + + + D  S    R+         A  S         + +  + ++R       
Sbjct: 264 EVDDTVAVCAYDPGSGRL-RIGAPQSTGTGAGTSYPAQILVTGNGRFAYLANRGDNSLTR 322

Query: 329 YVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           Y ++++G+  + +        F     +SP G L+          ++  + ++    R
Sbjct: 323 YAVEADGARLRLLDTVPVGGDFPRQIAFSPDGALLFAANQRSGDVSVFHVDEESGGLR 380


>gi|195146242|ref|XP_002014096.1| GL23036 [Drosophila persimilis]
 gi|194103039|gb|EDW25082.1| GL23036 [Drosophila persimilis]
          Length = 752

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 62/181 (34%), Gaps = 14/181 (7%)

Query: 151 WRKIAHTI-SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           WR  AH +    IY+S        +   +       S  +   L  ++R+ A I Y   +
Sbjct: 527 WR--AHNLHCAAIYRSHNYPIWCMDESPVGQYVVTGSKDLSARLWSLEREHALIIYAGHT 584

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           +D       F PN   +A  + D      V L      +  +   + R  +    FS +G
Sbjct: 585 QDVECV--AFHPNGSYLATGSADH----SVRLWCATSGKLMRVFTDCRQAVTNLAFSPDG 638

Query: 270 KRALISVQKDEAMDIYSVDL-QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           K         E   +   DL        L +      S ++SP +  +   +  +G  +L
Sbjct: 639 KMLA---AAGEEAKVRIFDLAAGAQLSELKDHPSPVSSLAWSPHNQHLA-TTCSDGSLRL 694

Query: 329 Y 329
           +
Sbjct: 695 W 695



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 64/161 (39%), Gaps = 19/161 (11%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREG 324
           S  G+  +++  KD +  ++S++ +      +      ++   ++ P+ S +      + 
Sbjct: 551 SPVGQY-VVTGSKDLSARLWSLEREHALI--IYAGHTQDVECVAFHPNGSYLA-TGSADH 606

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             +L+   +      R+  D   +  +  +SP G ++A    +GE+  + +         
Sbjct: 607 SVRLWC--ATSGKLMRVFTDCRQAVTNLAFSPDGKMLA---AAGEEAKVRIFDLAAGA-- 659

Query: 385 LLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            L E  +  +P     WSP  + L  +   DG    +L+ I
Sbjct: 660 QLSELKDHPSPVSSLAWSPHNQHLA-TTCSDGS--LRLWDI 697


>gi|281357800|ref|ZP_06244286.1| conserved hypothetical protein [Victivallis vadensis ATCC BAA-548]
 gi|281315747|gb|EFA99774.1| conserved hypothetical protein [Victivallis vadensis ATCC BAA-548]
          Length = 393

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 43/118 (36%), Gaps = 12/118 (10%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSV 287
           A +       V   ++R     +R+      +    FS +GKR L  S       +++ +
Sbjct: 276 ADWRGTGHEVVVFDESRRPFLAERLSPGHGRMSHLVFSPDGKRLLSDSYPAGGIQELHLI 335

Query: 288 DLQSNATERLTNTLFI-----------NISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +  +     L                 ++   +SPD  ++  +S  +G+  +Y+++  
Sbjct: 336 EADTGRCTLLGRFRHEQPAGTIVEVRCDLHPRWSPDGKRVTVDSIHDGRRGIYLLELE 393



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 12/83 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-----------SMILAPRFSS 267
           FSP+ +++   +Y    I  ++L++    R    +G FR              L PR+S 
Sbjct: 312 FSPDGKRLLSDSYPAGGIQELHLIEADTGRCT-LLGRFRHEQPAGTIVEVRCDLHPRWSP 370

Query: 268 NGKRALISVQKDEAMDIYSVDLQ 290
           +GKR  +    D    IY ++L+
Sbjct: 371 DGKRVTVDSIHDGRRGIYLLELE 393



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 34/94 (36%), Gaps = 14/94 (14%)

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQ--- 393
            +R+S          V+SP G  +    + +G    + +++ D  +  LL    + Q   
Sbjct: 297 AERLSP-GHGRMSHLVFSPDGKRLLSDSYPAGGIQELHLIEADTGRCTLLGRFRHEQPAG 355

Query: 394 ---------APTWSPSGRSLIFSRKKDGDTGSKL 418
                     P WSP G+ +      DG  G  L
Sbjct: 356 TIVEVRCDLHPRWSPDGKRVTVDSIHDGRRGIYL 389



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 44/124 (35%), Gaps = 14/124 (11%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGK- 325
           +  L+            V  +S      ERL+          +SPD  +++ +S   G  
Sbjct: 270 REVLVDADWRGTGHEVVVFDESRRPFLAERLSPGHGRMSHLVFSPDGKRLLSDSYPAGGI 329

Query: 326 EQLYVMQSNGSDQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           ++L++++++      +          +  +      P WSP G  +        +  I +
Sbjct: 330 QELHLIEADTGRCTLLGRFRHEQPAGTIVEVRCDLHPRWSPDGKRVTVDSIHDGRRGIYL 389

Query: 376 MKKD 379
           ++ +
Sbjct: 390 LELE 393


>gi|125539056|gb|EAY85451.1| hypothetical protein OsI_06831 [Oryza sativa Indica Group]
          Length = 554

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 75/206 (36%), Gaps = 16/206 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           ++ L   RD++ +  +FS N + +A A+ D   I+     D  +      +      ++ 
Sbjct: 223 VQVLRAHRDEV-WFLQFSNNGKYLASASNDKSAIIWKVDEDGEL-LLKHTLTGHDKPVMM 280

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESD 321
             +S +  +    +       I   D++S     +     I  IS  + PD   I+    
Sbjct: 281 VAWSPDDCQL---LTCGMEEVIRRWDVESGKCLHVYEKSGIGLISCGWFPDGKHIL---- 333

Query: 322 REG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             G       +   +G +       + +   D   S  G LI           I +  ++
Sbjct: 334 -SGLTDHNFCLWDLDGKEVDCWKGQRSSKTSDFAVSNDGKLIISMNREST---IRLFDRE 389

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
             QERL+ ED+ + + + S  G  L+
Sbjct: 390 TKQERLIEEDNTITSFSLSEDGDFLL 415


>gi|71736524|ref|YP_274841.1| hypothetical protein PSPPH_2651 [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71557077|gb|AAZ36288.1| conserved hypothetical protein [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 389

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 71/186 (38%), Gaps = 26/186 (13%)

Query: 260 ILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              PR   FSS+GK   +  +    +  ++++ ++ A ++ +    I    + +P  ++ 
Sbjct: 211 NTGPRHLAFSSDGKFLYVVGEMSGTVTAFAINQKTGALKQTSTADGIPKRLNLAPGQARD 270

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              +D +      +  ++                    +P G  +  ++ +    ++  +
Sbjct: 271 ARNNDLKDDPTPRIWAAD-----------------IRLAPNGKWLFISERTSSSVSVFKV 313

Query: 377 KKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +    +   +    +++   +    SP+GR L+ S +K    GS  Y+I  NG  + +  
Sbjct: 314 EPASGKVTFVENYPMQEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIAANGALQRVSE 371

Query: 433 TPAYAS 438
            P+   
Sbjct: 372 APSGKG 377


>gi|67536696|ref|XP_662122.1| hypothetical protein AN4518.2 [Aspergillus nidulans FGSC A4]
 gi|40741671|gb|EAA60861.1| hypothetical protein AN4518.2 [Aspergillus nidulans FGSC A4]
 gi|259482655|tpe|CBF77343.1| TPA: WD repeat protein (AFU_orthologue; AFUA_2G03080) [Aspergillus
           nidulans FGSC A4]
          Length = 1289

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 54/318 (16%), Positives = 105/318 (33%), Gaps = 47/318 (14%)

Query: 130 LWD------VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           L+D      V + + ++     +     R   H  S  +++         +     +S S
Sbjct: 160 LYDQIIATAVANGRIVVYDLHRTGLEYCRFQGH--SRQVHRLAFNP----HQPAWLLSGS 213

Query: 184 VVSGIIKNSLCVMDRD------GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
             + I    L  +  D      G+  +Y   S    + + R+SP    V +A   D    
Sbjct: 214 QDAHIRMWDLRTVPTDRGVSVCGSRDQY--NSNSDAVRDVRWSP-GDGVLFAVATDSGA- 269

Query: 238 RVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
            + L D R   +P  RI        +  +  +GK  + S   D  + ++   +      +
Sbjct: 270 -IQLWDIRKSSSPILRITAHDRPCYSVDWHPDGKHIV-SGGTDRQVKVWEFSITAERRQK 327

Query: 296 RLTNTLFINI-------SASYSPDS-------SQIVFESDREGKEQLYVMQSNGSDQK-R 340
            L                 S+S +S       S  V  S  +   ++++          R
Sbjct: 328 PLFQFRTPQAVLNVRWRPPSWSRESDSSGDWQSSQVVTSYDKEDPRVHLWDFRRPHIPFR 387

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                +++  D +W      + +T   G  F     + D      +V      +  WSPS
Sbjct: 388 EFDRYDSTATDLLW--HSKDLLWTVGDGGVFT----QTDVRYAPQVVNQRPTCSVAWSPS 441

Query: 401 GRSLIFSRKKDGDTGSKL 418
           G+ L F++K+   +   L
Sbjct: 442 GKVLAFAQKRPRRSIRGL 459



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 68/230 (29%), Gaps = 28/230 (12%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           +T+     L     D    +  K        I+A   + NG+  +  + +   ++     
Sbjct: 133 STHHAGGGLSARHKDQLTVKDVKWSHGLYDQIIATAVA-NGRIVVYDLHRTG-LEYCRFQ 190

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             S    RL          ++    SQ            L  + ++       S+D+  S
Sbjct: 191 GHSRQVHRLAFNPH---QPAWLLSGSQDA----HIRMWDLRTVPTDRGVSVCGSRDQYNS 243

Query: 349 YFDPV----WSPQGDLIAF-TKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGR 402
             D V    WSP GD + F          +  ++K  S   R+   D    +  W P G+
Sbjct: 244 NSDAVRDVRWSP-GDGVLFAVATDSGAIQLWDIRKSSSPILRITAHDRPCYSVDWHPDGK 302

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNET----LINTPAYA-----SDPQWV 443
            ++       D   K++   +             TP          P W 
Sbjct: 303 HIV---SGGTDRQVKVWEFSITAERRQKPLFQFRTPQAVLNVRWRPPSWS 349


>gi|317474738|ref|ZP_07934012.1| dipeptidyl peptidase IV [Bacteroides eggerthii 1_2_48FAA]
 gi|316909419|gb|EFV31099.1| dipeptidyl peptidase IV [Bacteroides eggerthii 1_2_48FAA]
          Length = 721

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 77/183 (42%), Gaps = 17/183 (9%)

Query: 264 RFSSNGKRA-LISVQKDEA-MDIYSVDLQSNAT-ERL---TNTLFINISAS----YSP-D 312
            ++ +GK   LI + +++    +   D ++      L   T+T +  +       + P D
Sbjct: 278 SWAPDGKSLYLIELNREQNHAKLCRYDSKTGELMSTLMEETHTKY--VEPQHPILFLPWD 335

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEK 370
            +  +++S R+G   LY+  ++G   +++++ +        ++ +    +IA T+ S  +
Sbjct: 336 HTLFIYQSQRDGYNHLYLYNTDGKLIRQLTRGEWLVQKILGFNAKKREVIIASTEVSPLQ 395

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNET 429
             +  +  +  +   L     +     S SG  +I  R    D   ++  I   NG+N +
Sbjct: 396 SNLYKVNVNTGKCTPLDNGKGIHEGILSASGSYII-DRYSTPDVPRQIDIITTQNGKNVS 454

Query: 430 LIN 432
           L+ 
Sbjct: 455 LLT 457



 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 27/231 (11%), Positives = 68/231 (29%), Gaps = 54/231 (23%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ------SNATERLTNTLFINISA 307
           G  +   +   ++  G     +V+ +  +D  +V  +        +  R  N   I+   
Sbjct: 145 GERKGSNI--DYTPEGGHIAYTVKNNLFVDNKAVTKEPEGIVCGQSVHR--NEFGISKGT 200

Query: 308 SYSPDSSQIVFESDREGKEQLY------------------------------VMQSNGSD 337
            +SP    + F    E     Y                              +   +   
Sbjct: 201 FWSPQGDLLAFYRMNESMVTPYPLVDITPRVALVDKIRYPMAGMLSHQVSVGIYNPDTQK 260

Query: 338 QKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL------VED 389
              ++     + +  +  W+P G  +   + + E+    + + D     L+         
Sbjct: 261 TVYLNTGDPTNRYFTNISWAPDGKSLYLIELNREQNHAKLCRYDSKTGELMSTLMEETHT 320

Query: 390 SNLQ--APT-WSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             ++   P  + P      I+  ++DG   + LY  + +G+    +    +
Sbjct: 321 KYVEPQHPILFLPWDHTLFIYQSQRDG--YNHLYLYNTDGKLIRQLTRGEW 369


>gi|302831339|ref|XP_002947235.1| hypothetical protein VOLCADRAFT_87388 [Volvox carteri f. nagariensis]
 gi|300267642|gb|EFJ51825.1| hypothetical protein VOLCADRAFT_87388 [Volvox carteri f. nagariensis]
          Length = 1994

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/326 (11%), Positives = 84/326 (25%), Gaps = 54/326 (16%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+VI  G +   +  RLWD    +                  HT +         E+G  
Sbjct: 1239 GQVIASGSN--DMTCRLWDAATGQCTAVLS-----------GHTAAITGVAFSPPERGKA 1285

Query: 174  ----------NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP---SRDQILFEPRFS 220
                      + R+   +    +   +         G            R       R S
Sbjct: 1286 LRLVTASQDDSLRMWAPAPKRPATAQQQQRGRRGSTGGLAPSPLNPAAGRRDERQRQRHS 1345

Query: 221  PNQQKV-----AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
                ++                      +      + +   +  +    ++ +G+R    
Sbjct: 1346 SGGLEMDVDVAMGLAVRISGAGGDDNGSSSSYTCVQVLPGGQGGLQGVAWAPDGRRLA-- 1403

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD--SSQIVFESDREGKEQLYVMQS 333
                  + ++++         L+      +  ++SP+    ++         + + +  +
Sbjct: 1404 GAHGAEVWLWALPA-GKMAVTLSGHTGKVLGIAFSPNDGGRRLASC---GWDQVIRLWDT 1459

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--------- 384
              +     +           WSP G  +A +  S     I  +                 
Sbjct: 1460 RTNQCVATATGHSELVRSLSWSPDGRRLA-SASSDNTMRIWDVTPTLGGGAATTAAPAVP 1518

Query: 385  -----LLVEDSNLQAPTWSPSGRSLI 405
                 LL +   + A ++SP  R+L 
Sbjct: 1519 VLCTALLRQAEWMTAVSFSPDSRALA 1544



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 58/407 (14%), Positives = 123/407 (30%), Gaps = 78/407 (19%)

Query: 56   VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG- 114
                 LG  +   +  +L R      ++  +  Q      ++P + +W +   Q ++ G 
Sbjct: 1132 AGDAVLGTALMSPIGSELYR------VALRAANQGWRTRVAVPSYDEWPAD--QAVLKGH 1183

Query: 115  -----RVIKEGKDRLRV-------EFRLWDVKDRK---QIIGKKFFSSPASWRKIAHTIS 159
                  V+     R  V       E R+WD+        ++G K   +  +       I+
Sbjct: 1184 TGNVTSVVFSPDGRQLVSSSGGGHELRVWDISSGTCCAVLLGHKADVTCLAMSADGQVIA 1243

Query: 160  DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
                  +T    D  +       S  +  I          G  +R +T S+D  L    +
Sbjct: 1244 SGSND-MTCRLWDAATGQCTAVLSGHTAAITGVAFSPPERGKALRLVTASQDDSLRM--W 1300

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            +P  ++ A A                      R G+   +  +P   + G+R     Q+ 
Sbjct: 1301 APAPKRPATAQQQQRG----------------RRGSTGGLAPSPLNPAAGRRDERQRQRH 1344

Query: 280  EAMDI-YSVDLQSNATERLTNTLFINISAS--------------------YSPDSSQIVF 318
             +  +   VD+      R++     +  +S                    ++PD  ++  
Sbjct: 1345 SSGGLEMDVDVAMGLAVRISGAGGDDNGSSSSYTCVQVLPGGQGGLQGVAWAPDGRRLA- 1403

Query: 319  ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKFAIGVM 376
                    ++++                       +SP   G  +A     G    I + 
Sbjct: 1404 ---GAHGAEVWLWALPAGKMAVTLSGHTGKVLGIAFSPNDGGRRLASC---GWDQVIRLW 1457

Query: 377  KKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                +Q           +++ +WSP GR L  +     D   +++ +
Sbjct: 1458 DTRTNQCVATATGHSELVRSLSWSPDGRRLASASS---DNTMRIWDV 1501


>gi|281351318|gb|EFB26902.1| hypothetical protein PANDA_019534 [Ailuropoda melanoleuca]
          Length = 597

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 72/244 (29%), Gaps = 55/244 (22%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   +++P+   +A  + D    LR++    +          F   I    +
Sbjct: 48  IYTEHAHQVVVAKYAPSGFYIA--SGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAW 105

Query: 266 SSNGKRALISVQK--------------------DEAMDIYSVDLQSNATERLTNTLFINI 305
           + + KR  +  +                          I SVD++ +   RL      N 
Sbjct: 106 TEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNC 165

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A +             EG    +              D         +SP G+  A   
Sbjct: 166 AAFF-------------EGPPFKFKFTIG---------DHGRFVNCVRFSPDGNRFATAS 203

Query: 366 FSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G    I V      ++          D  + A +WSP    L+      GD  SK++ 
Sbjct: 204 ADG---QIYVYDGKTGEKVCALGGGKAHDGGIYAISWSPDSTHLL---SASGDKTSKIWD 257

Query: 421 IDLN 424
           +++N
Sbjct: 258 VNVN 261



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 87/268 (32%), Gaps = 40/268 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 4   FASLPQVERGVSKIIGGDPKGNNFIYTNGKCVILRNIDNPALADIYTE----HAHQVVVA 59

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 60  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 119

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-------GANIRYLTP 208
                          G+       ++   +       L     D       G   ++   
Sbjct: 120 EKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFT 179

Query: 209 SRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
             D   F    RFSP+  + A A+ D     ++Y+ D +       +G  +     I A 
Sbjct: 180 IGDHGRFVNCVRFSPDGNRFATASADG----QIYVYDGKTGEKVCALGGGKAHDGGIYAI 235

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +S +    L S   D+   I+ V++ S
Sbjct: 236 SWSPDSTHLL-SASGDKTSKIWDVNVNS 262


>gi|242762663|ref|XP_002340423.1| dipeptidyl peptidase IV, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218723619|gb|EED23036.1| dipeptidyl peptidase IV, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 653

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 56/189 (29%), Gaps = 25/189 (13%)

Query: 114 GRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
           G +      RL           L D    +    +   +  A  R     +        T
Sbjct: 84  GSIAMHPNGRLLFTNHPNNGIFLLDPASGQV---ETVVAPDADVRYGNFNV------HPT 134

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            ++     +     +S  S  + N++  +    AN+  +    D     P+FSP+  ++ 
Sbjct: 135 AQEWIVAVQETHTKDSHGSTTVTNTIVAIHVPTANVSNIVQGAD-FYQHPQFSPDGSQIC 193

Query: 228 YATYDDEDILR------VYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRALISVQKD 279
           +  +D  D+        +   +         +     +     PR+S +G        K 
Sbjct: 194 WTQWDHPDMPWTGTLLCIASWEPNKLLEGNLVSGQAGVESICQPRWSIDGT-LFYVSDKS 252

Query: 280 EAMDIYSVD 288
               +Y  D
Sbjct: 253 GYWQLYRFD 261


>gi|145339083|ref|NP_189852.2| nucleotide binding [Arabidopsis thaliana]
 gi|332644223|gb|AEE77744.1| chromosome transmission fidelity protein 4 [Arabidopsis thaliana]
          Length = 953

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 67/228 (29%), Gaps = 21/228 (9%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
              +       +     S +   +A  + D      V L           I  F   I  
Sbjct: 54  PPTILRHHQDGVTSLALSNDSTLLASGSIDH----CVKLYKFPSGEFQTNITRFTLPIRV 109

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             F+ +G     +   +    I + D   +    L           + P+   +    D 
Sbjct: 110 LAFNGSGSLLAAAGDDEGIKLINTFD--GSIVRVLKGHKGPVTGLDFHPNGELLA-SIDT 166

Query: 323 EGKEQLY-----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            G    +     V+          +    +    P WSP G  +A     G +  + +  
Sbjct: 167 TGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAV---PGLRNDVVMYD 223

Query: 378 KDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   ++   +   +L+A    TW+P+G+ +        D    L+ +D
Sbjct: 224 RFTGEKLFALRGDHLEAICYLTWAPNGKYIA---TSGLDKQVLLWDVD 268



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 64/198 (32%), Gaps = 22/198 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +    +     +   +  + V+   +     P  + + +  + +   S++    L S   
Sbjct: 25  WDHKAEHFV-TSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLALSND-STLLASGSI 82

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + +Y           +T         +++   S +    D EG   + ++ +     
Sbjct: 83  DHCVKLYKFP-SGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEG---IKLINTFDGSI 138

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE-----------KFAIGVMKKDGSQERLLV 387
            R+ +  +       + P G+L+A    +G             F +  +  D        
Sbjct: 139 VRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTG-----F 193

Query: 388 EDSNLQAPTWSPSGRSLI 405
             S +  P WSP GR+L 
Sbjct: 194 NTSIVNIPRWSPDGRTLA 211



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG+ +R L   +  +     F PN + +A +      +L   L +  +    K +    
Sbjct: 134 FDGSIVRVLKGHKGPVTGL-DFHPNGELLA-SIDTTGTVLCWELQNGVVSFTLKGVAPDT 191

Query: 258 SMILA----PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SY 309
               +    PR+S +G+   +   ++   D+   D  +   E+L      ++ A    ++
Sbjct: 192 GFNTSIVNIPRWSPDGRTLAVPGLRN---DVVMYDRFTG--EKLFALRGDHLEAICYLTW 246

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSG 368
           +P+   I   S  +  +Q+ +   +   ++ I + K         W P G+ ++     G
Sbjct: 247 APNGKYIA-TSGLD--KQVLLWDVD--KKQDIDRHKFEERICCMSWKPNGNALSVIDAKG 301

Query: 369 E 369
            
Sbjct: 302 R 302


>gi|157960560|ref|YP_001500594.1| peptidase S9B dipeptidylpeptidase IV subunit [Shewanella pealeana
           ATCC 700345]
 gi|157845560|gb|ABV86059.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           pealeana ATCC 700345]
          Length = 748

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 61/194 (31%), Gaps = 55/194 (28%)

Query: 261 LAPR---FSSNGKRALI-SVQKDEA--MDIYSVDLQSNATERLTNTLFINI--------- 305
            +PR    S +GKR    + +KD+    D++ +D+ S     L N   +           
Sbjct: 50  SSPRGLKLSPDGKRVTYLAGRKDDQHLYDLWQMDVASGKQSVLINADKLEAGELSDEEKA 109

Query: 306 -------------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                           +S D   ++  +       LY    N +  K + +  E    D 
Sbjct: 110 RRERQRIYGQGIMEYFWSDDGEAVLIPA----AGLLYYYSVNDNKVKLL-ETGEGFATDA 164

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQA 394
             SP+G  ++F +       + V+     +   L  D                    +  
Sbjct: 165 RLSPKGHFVSFVREQ----NLYVLDLKSHKITALTTDGGGAIKNAMAEFVAQEEMGRMTG 220

Query: 395 PTWSPSGRSLIFSR 408
             W+P   ++ ++R
Sbjct: 221 YWWAPDESAIAYTR 234



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 72/232 (31%), Gaps = 58/232 (25%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + + V            V       D   K +          R S  G       ++
Sbjct: 126 WSDDGEAVLIPAAGLLYYYSVN------DNKVKLLETGEGFATDARLSPKGHFVSFVREQ 179

Query: 279 DEAMDIYSVDLQSNATERLTNT-----------------LFINISASYSPDSSQIVFESD 321
           +    +Y +DL+S+    LT                   +       ++PD S I +   
Sbjct: 180 N----LYVLDLKSHKITALTTDGGGAIKNAMAEFVAQEEMGRMTGYWWAPDESAIAYT-- 233

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVM 376
                     + + S  + +++++  +         G  +A     +   +  K  +GV+
Sbjct: 234 ----------RIDESSVELVTRNEIYA--------DGIKLAEQRYPYAGENNVKVELGVV 275

Query: 377 KKDGSQE--RLLVEDSNLQAPT--WSPSGRSLIF--SRKKDGDTGSKLYSID 422
                +     L +D+++  P   W P  + L +    +       ++ +ID
Sbjct: 276 TLKDKKVAWVDLGKDTDIYLPRVKWLPDSKHLSYQWQSRDQQALDLRIVAID 327



 Score = 43.1 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 62/153 (40%), Gaps = 11/153 (7%)

Query: 205 YLTPSRDQILFEPR--FSPNQQKVAYATYDDED------ILRVYLMDTRIDRAPKRIGNF 256
           ++   +D  ++ PR  + P+ + ++Y     +       I+ +  +    D   +R   +
Sbjct: 284 WVDLGKDTDIYLPRVKWLPDSKHLSYQWQSRDQQALDLRIVAIDDIKNDKDLVQERSKAW 343

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            ++     F    K  + + ++D    +Y + L      +LT+  +   +  Y  + +  
Sbjct: 344 VNLNDDLHFLKQQKAFIWASERDGFNHLYLIGLDGKVIRQLTSGDWAVDAVEYVDEKAGD 403

Query: 317 VFESDREGK---EQLYVMQSNGSDQKRISQDKE 346
           V+ + R+ K   +QLY +   G   + ISQ   
Sbjct: 404 VYFTGRKTKVTEKQLYRVALAGGKVESISQRSG 436


>gi|7523391|emb|CAB86449.1| putative protein [Arabidopsis thaliana]
          Length = 951

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 67/228 (29%), Gaps = 21/228 (9%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
              +       +     S +   +A  + D      V L           I  F   I  
Sbjct: 54  PPTILRHHQDGVTSLALSNDSTLLASGSIDH----CVKLYKFPSGEFQTNITRFTLPIRV 109

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             F+ +G     +   +    I + D   +    L           + P+   +    D 
Sbjct: 110 LAFNGSGSLLAAAGDDEGIKLINTFD--GSIVRVLKGHKGPVTGLDFHPNGELLA-SIDT 166

Query: 323 EGKEQLY-----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            G    +     V+          +    +    P WSP G  +A     G +  + +  
Sbjct: 167 TGTVLCWELQNGVVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAV---PGLRNDVVMYD 223

Query: 378 KDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   ++   +   +L+A    TW+P+G+ +        D    L+ +D
Sbjct: 224 RFTGEKLFALRGDHLEAICYLTWAPNGKYIA---TSGLDKQVLLWDVD 268



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 64/198 (32%), Gaps = 22/198 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +    +     +   +  + V+   +     P  + + +  + +   S++    L S   
Sbjct: 25  WDHKAEHFV-TSSSSDPSISVHDGLSTSTLPPTILRHHQDGVTSLALSND-STLLASGSI 82

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + +Y           +T         +++   S +    D EG   + ++ +     
Sbjct: 83  DHCVKLYKFP-SGEFQTNITRFTLPIRVLAFNGSGSLLAAAGDDEG---IKLINTFDGSI 138

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE-----------KFAIGVMKKDGSQERLLV 387
            R+ +  +       + P G+L+A    +G             F +  +  D        
Sbjct: 139 VRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTG-----F 193

Query: 388 EDSNLQAPTWSPSGRSLI 405
             S +  P WSP GR+L 
Sbjct: 194 NTSIVNIPRWSPDGRTLA 211



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 68/181 (37%), Gaps = 21/181 (11%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG+ +R L   +  +     F PN + +A +      +L   L +  +    K +    
Sbjct: 134 FDGSIVRVLKGHKGPVTGL-DFHPNGELLA-SIDTTGTVLCWELQNGVVSFTLKGVAPDT 191

Query: 258 SMILA----PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SY 309
               +    PR+S +G+   +   ++   D+   D  +   E+L      ++ A    ++
Sbjct: 192 GFNTSIVNIPRWSPDGRTLAVPGLRN---DVVMYDRFTG--EKLFALRGDHLEAICYLTW 246

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSG 368
           +P+   I   S  +  +Q+ +   +   ++ I + K         W P G+ ++     G
Sbjct: 247 APNGKYIA-TSGLD--KQVLLWDVD--KKQDIDRHKFEERICCMSWKPNGNALSVIDAKG 301

Query: 369 E 369
            
Sbjct: 302 R 302


>gi|326923905|ref|XP_003208173.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Meleagris gallopavo]
          Length = 627

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 60/170 (35%), Gaps = 16/170 (9%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS---NATERL 297
           +MD +     K +      +    FS +    L S  +D  + ++S+   +         
Sbjct: 354 IMDEKTASELKILYGHSGPVYGTSFSPDRNYLL-SCSEDGTVRLWSLQTFTCLVGYKGH- 411

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSP 356
            N    +    +SP      F S   G +++  + + +     RI     A      + P
Sbjct: 412 -NYPVWDTQ--FSPYG--YYFVS--GGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHP 464

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
             + IA T  +     +  +  +G+  R+       + +  +SP+GR L 
Sbjct: 465 NSNYIA-TGSADRTVRLWDV-LNGNCVRIFTGHKGPIHSLAFSPNGRFLA 512



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 71/213 (33%), Gaps = 12/213 (5%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD   A+   +       ++   FSP++  +   + D    +R++ + T       + 
Sbjct: 353 RIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSED--GTVRLWSLQTFTCLVGYKG 410

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            N+   +   +FS  G    +S   D    +++ D            L       + P+S
Sbjct: 411 HNYP--VWDTQFSPYG-YYFVSGGHDRVARLWATDH-YQPLRIFAGHLADVTCTRFHPNS 466

Query: 314 SQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           + I   S DR     + +      +  RI    +       +SP G  +A T  +  +  
Sbjct: 467 NYIATGSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLA-TGATDGRVL 521

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +  +        L      + A  +S  G  L 
Sbjct: 522 LWDIGHGLMVGELKGHTDTIYALRFSRDGEILA 554



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 412 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 467

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 468 YIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDG----RVLLW 523

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      I A RFS +G   L S   D  + ++
Sbjct: 524 DIGHGLMVGELKGHTDTIYALRFSRDG-EILASGSMDNTVRLW 565


>gi|320168392|gb|EFW45291.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1433

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 76/219 (34%), Gaps = 20/219 (9%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             L    FS +  ++   +Y  ED   + ++D++I+  P    + ++++    FS +GKR
Sbjct: 551 GSLLNAVFSLDGSRLL-CSYATED-YGLRVIDSQIEPTPNFYRHVKAVVCC-AFSPDGKR 607

Query: 272 ALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            + S        +   D  +      LT       S  + P + +++  S  +   +L+ 
Sbjct: 608 VVSSAALGP---VCVWDAATCETLLELTGHSHTVKSCCFQPRTGKMILTSSWDKTFKLW- 663

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQE----- 383
             SN           +       + P+  LIA     G  + +        G        
Sbjct: 664 -DSNTGTCLATGTGHDGPINYATFGPRDPLIATASGDGSIKLWRYATSSAAGGTVTVQLV 722

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             L      +    +SP G  L+       D   +L+SI
Sbjct: 723 ATLASHKGAVNYVVFSPDGTLLV---SCGFDRSVRLWSI 758



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 68/236 (28%), Gaps = 37/236 (15%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     +  + D +           D  +    F P    +A A+ D    L  Y   + 
Sbjct: 653 TSSWDKTFKLWDSNTGTCLATGTGHDGPINYATFGPRDPLIATASGDGSIKLWRYATSSA 712

Query: 246 IDRAPKR-----IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD------------ 288
                       + + +  +    FS +G   L+S   D ++ ++S+             
Sbjct: 713 AGGTVTVQLVATLASHKGAVNYVVFSPDGT-LLVSCGFDRSVRLWSIPQILAAVAAAGVG 771

Query: 289 -----LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                + +N    L +     +SAS+SPD S++   S     + + +         R   
Sbjct: 772 ASSPPIITNPLNVLQDHTNSVLSASFSPDGSRLATTSL---DKSVKIWDV------RALA 822

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                      S   D  A    + +   I      G              P++SP
Sbjct: 823 RMRGGAGGKAVSLDSDGGATDSPAADDVTIA-----GGIGIYATASGFTSTPSFSP 873



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 58/202 (28%), Gaps = 36/202 (17%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           F+LWD      +        P ++        D +   I    GD + ++   + S  +G
Sbjct: 660 FKLWDSNTGTCLATGTGHDGPINYATFGPR--DPL---IATASGDGSIKLWRYATSSAAG 714

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-------EDILRVY 240
                  V             S    +    FSP+   +    +D          IL   
Sbjct: 715 GTVTVQLVA---------TLASHKGAVNYVVFSPDGTLLVSCGFDRSVRLWSIPQILAAV 765

Query: 241 LMDTRIDRAPKRIGN-------FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL---- 289
                   +P  I N         + +L+  FS +G R   +   D+++ I+ V      
Sbjct: 766 AAAGVGASSPPIITNPLNVLQDHTNSVLSASFSPDGSRLA-TTSLDKSVKIWDVRALARM 824

Query: 290 ---QSNATERLTNTLFINISAS 308
                     L +      S +
Sbjct: 825 RGGAGGKAVSLDSDGGATDSPA 846


>gi|270011670|gb|EFA08118.1| hypothetical protein TcasGA2_TC005722 [Tribolium castaneum]
          Length = 602

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 71/220 (32%), Gaps = 14/220 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   ++SP+   +A  + D    +R++    +              I    +
Sbjct: 53  VYTEHSCPVNVAKYSPSGFYIA--SGDQSGKVRIWDTVNKEHILKNEFHPIGGPIKDIAW 110

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S + +R ++  +  E      +     +   ++       S  + P     +     +  
Sbjct: 111 SPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFKPTRPFRIITGSED-- 168

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER- 384
             + V +      K   Q+         +SP G+L A   F G+ F   +     S    
Sbjct: 169 NTIAVFEGPPFKFKMTKQEHSRFVQAVRYSPTGNLFASAGFDGKVF---LYDGTSSDLVG 225

Query: 385 ---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                     +   +WSP G+ L+ +    GD  +KL+ +
Sbjct: 226 EVGSPAHSGGVYGVSWSPDGKQLLTAS---GDKTAKLWDV 262



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 74/210 (35%), Gaps = 41/210 (19%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS----------SPASWR---------KI 154
           G  I  G    +V  R+WD  +++ I+  +F            SP + R         + 
Sbjct: 70  GFYIASGDQSGKV--RIWDTVNKEHILKNEFHPIGGPIKDIAWSPDNQRMVVVGEGRERF 127

Query: 155 AHTISDDIYQSITGEKG--------DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
            H    +   S+    G        DF     F    +++G   N++ V +      +  
Sbjct: 128 GHVFMSETGTSVGEISGQSKPINSCDFKPTRPF---RIITGSEDNTIAVFEGPPFKFKMT 184

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPR 264
                + +   R+SP     A A +D +    V+L D         +G+      +    
Sbjct: 185 KQEHSRFVQAVRYSPTGNLFASAGFDGK----VFLYDGTSSDLVGEVGSPAHSGGVYGVS 240

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +S +GK+ L +   D+   ++  D+++   
Sbjct: 241 WSPDGKQLL-TASGDKTAKLW--DVETRQV 267


>gi|253573457|ref|ZP_04850800.1| 6-phosphogluconolactonase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251846985|gb|EES74990.1| 6-phosphogluconolactonase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 364

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/293 (12%), Positives = 82/293 (27%), Gaps = 26/293 (8%)

Query: 121 KDRLRVEFRLWDVKDRKQI--IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
                 E   +DV    ++  + ++    P+S    +H   D          G     + 
Sbjct: 74  GGERIGEVVAFDVDAGGKLRELNREVTIRPSS----SHIQLDRS-GRFAAVSGYHGGNVG 128

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
            V+     G +   +     +G     +   R        FSP+  + A       D + 
Sbjct: 129 LVALQ-ADGTVGKLVDERQHEGQGADPVRQDRPHPHSV-TFSPD-NRYALVADLGLDRIF 185

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNA-- 293
           VY  +    +   R          PR   F  NG+      + + ++ ++S D  +    
Sbjct: 186 VYSFEPESGQLVYRSEASTPPGAGPRHLAFHPNGQWLYSINEVNSSISLFSYDATTGELA 245

Query: 294 -----TERLTNTLFINISA--SYSPDSSQIVFESDREGKEQL-YVMQSNGSDQKRISQDK 345
                     +    N +A  + S D   + + S+R     + + +         +    
Sbjct: 246 LQDTVPTLPADYTGENTTAEVAISADGRYL-YGSNRGHDSLVQFAIDPESGRLTLVEHVS 304

Query: 346 --EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                      +P G  +          A+  +  D  +        ++  P 
Sbjct: 305 SEGGHPRHFALTPDGKHLIAANRDNNLLAVFTVDPDSGRLTFTGRTVSVSKPV 357



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 37/253 (14%), Positives = 78/253 (30%), Gaps = 40/253 (15%)

Query: 73  LQRSDVFNLISQ-------DSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-----VIKEG 120
           L RS  F  +S            Q       +   +     GA  +   R     V    
Sbjct: 110 LDRSGRFAAVSGYHGGNVGLVALQADGTVGKLVDERQHEGQGADPVRQDRPHPHSVTFSP 169

Query: 121 KDRLRVEFRL---------WDVKDRKQIIGKKFFSSP-ASWRKIAHTISDDIYQSITGEK 170
            +R  +   L         ++ +  + +   +  + P A  R +A               
Sbjct: 170 DNRYALVADLGLDRIFVYSFEPESGQLVYRSEASTPPGAGPRHLA-----------FHPN 218

Query: 171 GDFNSRILFVSESVVSGIIK-NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           G +   I  V+ S+        +  +  +D         + +    E   S + + + Y 
Sbjct: 219 GQWLYSINEVNSSISLFSYDATTGELALQDTVPTLPADYTGENTTAEVAISADGRYL-YG 277

Query: 230 TYDDEDILRVYLMDTRIDRAP--KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +    D L  + +D    R    + + +          + +GK  + + + +  + +++V
Sbjct: 278 SNRGHDSLVQFAIDPESGRLTLVEHVSSEGGHPRHFALTPDGKHLIAANRDNNLLAVFTV 337

Query: 288 DLQSNATERLTNT 300
           D  S    RLT T
Sbjct: 338 DPDSG---RLTFT 347


>gi|163852262|ref|YP_001640305.1| WD-40 repeat-containing protein [Methylobacterium extorquens PA1]
 gi|163663867|gb|ABY31234.1| WD-40 repeat protein [Methylobacterium extorquens PA1]
          Length = 440

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 76/239 (31%), Gaps = 24/239 (10%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G  N+          S      + +     A    +       +     SP+   +A A 
Sbjct: 74  GAVNAVAALPDGRFASASEDGRIALWRLGQAEPDCVLAGHAGPVAGLAVSPDGTMLASAA 133

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +D     R++ +        + +   +  + A  F  +G+  L++   D ++ I++   +
Sbjct: 134 WD--GTARIWPL---AGGPARVLEGHKGNVNAVAFLPDGR--LVTAGADASVRIWTPQGE 186

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +  T  L + L    + + + D           G +      +     +   +   A   
Sbjct: 187 TAVTATLPSALS---ALAVTADGEIAA-----AGADATVRFLAPDGQVRSEVELGPAPVI 238

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS----PSGRSLI 405
               +P G  IA     G    + ++++     ++L        P WS    P G  L+
Sbjct: 239 ALAPAPDGARIAAASAGGT---VAMIERASG--KILFTLVGPGLPVWSLAWRPDGSELV 292


>gi|146324908|sp|Q09589|HIRA_CAEEL RecName: Full=Protein HIRA homolog
 gi|227452787|gb|ACP34147.1| Hypothetical protein K10D2.1a [Caenorhabditis elegans]
          Length = 935

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 57/167 (34%), Gaps = 29/167 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------------RIGNFRSMILAPR 264
           R+SP+ ++ A+ + D    +  Y+       +                +      +L   
Sbjct: 81  RWSPDGKRFAFGSDDSSVSVWEYVGLINSMGSITGGAQNVERYKECCVLRGHSMEVLTVE 140

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESD 321
           +S NGK    S   D    I   + +    +R+T    I +     S+ P    +     
Sbjct: 141 WSPNGKYLA-SGSID--YRIIIYNAR-KLPDRITVLNDIQLPVKGLSWDPIGKYLA---S 193

Query: 322 REGKEQLYVMQSNGSD-QKRISQDKEAS-----YFDPVWSPQGDLIA 362
            EG ++L    ++     K +++  E++          WSP G  + 
Sbjct: 194 LEGDKKLRFWATDSWQCVKSVTEPFESNIEETMLTRLDWSPDGKYLM 240



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 25/135 (18%)

Query: 306 SASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFDPV------ 353
           S  +SPD  +  F SD       E    +  M S     + + + KE             
Sbjct: 79  SCRWSPDGKRFAFGSDDSSVSVWEYVGLINSMGSITGGAQNVERYKECCVLRGHSMEVLT 138

Query: 354 --WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFS 407
             WSP G  +A        + I +       +R+ V + ++Q P    +W P G+ L   
Sbjct: 139 VEWSPNGKYLASGSID---YRIIIYNARKLPDRITVLN-DIQLPVKGLSWDPIGKYLA-- 192

Query: 408 RKKDGDTGSKLYSID 422
              +GD   + ++ D
Sbjct: 193 -SLEGDKKLRFWATD 206



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 34/168 (20%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSV--------DLQSN--ATER------LTNTLFINISA 307
           R+S +GKR       D ++ ++           +       ER      L       ++ 
Sbjct: 81  RWSPDGKRFAF-GSDDSSVSVWEYVGLINSMGSITGGAQNVERYKECCVLRGHSMEVLTV 139

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTK 365
            +SP+   +   S      ++ +  +      RI+   D +       W P G  +A   
Sbjct: 140 EWSPNGKYLASGSI---DYRIIIYNAR-KLPDRITVLNDIQLPVKGLSWDPIGKYLA--S 193

Query: 366 FSGEKFAIGVMKKDGSQ-ERLLVED--SNLQAPT-----WSPSGRSLI 405
             G+K  +     D  Q  + + E   SN++        WSP G+ L+
Sbjct: 194 LEGDK-KLRFWATDSWQCVKSVTEPFESNIEETMLTRLDWSPDGKYLM 240



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 18/136 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---A 262
           +       +    +SPN + +A  + D     R+ + + R  + P RI     + L    
Sbjct: 128 VLRGHSMEVLTVEWSPNGKYLASGSID----YRIIIYNAR--KLPDRITVLNDIQLPVKG 181

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YSPDSSQI 316
             +   GK    S++ D+ +  ++ D      + +T     NI  +      +SPD   +
Sbjct: 182 LSWDPIGKYLA-SLEGDKKLRFWATD-SWQCVKSVTEPFESNIEETMLTRLDWSPDGKYL 239

Query: 317 VF-ESDREGKEQLYVM 331
           +   + R GK  + ++
Sbjct: 240 MTPAAVRSGKPLIKLI 255


>gi|115535793|ref|NP_871692.2| hypothetical protein K10D2.1 [Caenorhabditis elegans]
 gi|85662553|gb|AAN65314.2| Hypothetical protein K10D2.1b [Caenorhabditis elegans]
          Length = 669

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 57/167 (34%), Gaps = 29/167 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------------RIGNFRSMILAPR 264
           R+SP+ ++ A+ + D    +  Y+       +                +      +L   
Sbjct: 81  RWSPDGKRFAFGSDDSSVSVWEYVGLINSMGSITGGAQNVERYKECCVLRGHSMEVLTVE 140

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESD 321
           +S NGK    S   D    I   + +    +R+T    I +     S+ P    +     
Sbjct: 141 WSPNGKYLA-SGSID--YRIIIYNAR-KLPDRITVLNDIQLPVKGLSWDPIGKYLA---S 193

Query: 322 REGKEQLYVMQSNGSD-QKRISQDKEAS-----YFDPVWSPQGDLIA 362
            EG ++L    ++     K +++  E++          WSP G  + 
Sbjct: 194 LEGDKKLRFWATDSWQCVKSVTEPFESNIEETMLTRLDWSPDGKYLM 240



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 25/135 (18%)

Query: 306 SASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFDPV------ 353
           S  +SPD  +  F SD       E    +  M S     + + + KE             
Sbjct: 79  SCRWSPDGKRFAFGSDDSSVSVWEYVGLINSMGSITGGAQNVERYKECCVLRGHSMEVLT 138

Query: 354 --WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFS 407
             WSP G  +A        + I +       +R+ V + ++Q P    +W P G+ L   
Sbjct: 139 VEWSPNGKYLASGSID---YRIIIYNARKLPDRITVLN-DIQLPVKGLSWDPIGKYLA-- 192

Query: 408 RKKDGDTGSKLYSID 422
              +GD   + ++ D
Sbjct: 193 -SLEGDKKLRFWATD 206



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 34/168 (20%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSV--------DLQSN--ATER------LTNTLFINISA 307
           R+S +GKR       D ++ ++           +       ER      L       ++ 
Sbjct: 81  RWSPDGKRFAF-GSDDSSVSVWEYVGLINSMGSITGGAQNVERYKECCVLRGHSMEVLTV 139

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTK 365
            +SP+   +   S      ++ +  +      RI+   D +       W P G  +A   
Sbjct: 140 EWSPNGKYLASGSI---DYRIIIYNAR-KLPDRITVLNDIQLPVKGLSWDPIGKYLA--S 193

Query: 366 FSGEKFAIGVMKKDGSQ-ERLLVED--SNLQAPT-----WSPSGRSLI 405
             G+K  +     D  Q  + + E   SN++        WSP G+ L+
Sbjct: 194 LEGDK-KLRFWATDSWQCVKSVTEPFESNIEETMLTRLDWSPDGKYLM 240



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 18/136 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---A 262
           +       +    +SPN + +A  + D     R+ + + R  + P RI     + L    
Sbjct: 128 VLRGHSMEVLTVEWSPNGKYLASGSID----YRIIIYNAR--KLPDRITVLNDIQLPVKG 181

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YSPDSSQI 316
             +   GK    S++ D+ +  ++ D      + +T     NI  +      +SPD   +
Sbjct: 182 LSWDPIGKYLA-SLEGDKKLRFWATD-SWQCVKSVTEPFESNIEETMLTRLDWSPDGKYL 239

Query: 317 VF-ESDREGKEQLYVM 331
           +   + R GK  + ++
Sbjct: 240 MTPAAVRSGKPLIKLI 255


>gi|17554124|ref|NP_498101.1| hypothetical protein K10D2.1 [Caenorhabditis elegans]
          Length = 1223

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 57/167 (34%), Gaps = 29/167 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------------RIGNFRSMILAPR 264
           R+SP+ ++ A+ + D    +  Y+       +                +      +L   
Sbjct: 369 RWSPDGKRFAFGSDDSSVSVWEYVGLINSMGSITGGAQNVERYKECCVLRGHSMEVLTVE 428

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESD 321
           +S NGK    S   D    I   + +    +R+T    I +     S+ P    +     
Sbjct: 429 WSPNGKYLA-SGSID--YRIIIYNAR-KLPDRITVLNDIQLPVKGLSWDPIGKYLA---S 481

Query: 322 REGKEQLYVMQSNGSD-QKRISQDKEAS-----YFDPVWSPQGDLIA 362
            EG ++L    ++     K +++  E++          WSP G  + 
Sbjct: 482 LEGDKKLRFWATDSWQCVKSVTEPFESNIEETMLTRLDWSPDGKYLM 528



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 78/235 (33%), Gaps = 41/235 (17%)

Query: 222 NQQKVAYATYDDEDIL--RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +   + +   D    +    Y M      +P  +G+    ILA     +GK+ +   QK 
Sbjct: 267 DGFPIFWVQGDPYQPIPEEFYEMGDVYVTSPTFVGHDTGSILAIDCHPSGKKFITCGQKA 326

Query: 280 EAMDIYSV-----------DLQSNATERL---TNTLFINISASYSPDSSQIVFESD---- 321
              +   V              +    +L     +   + S  +SPD  +  F SD    
Sbjct: 327 RTSNGLVVVWNAEPVLDKKKASNENVPKLLFQVESQSQSNSCRWSPDGKRFAFGSDDSSV 386

Query: 322 --REGKEQLYVMQSNGSDQKRISQDKEASYFDPV--------WSPQGDLIAFTKFSGEKF 371
              E    +  M S     + + + KE               WSP G  +A        +
Sbjct: 387 SVWEYVGLINSMGSITGGAQNVERYKECCVLRGHSMEVLTVEWSPNGKYLASGSID---Y 443

Query: 372 AIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSID 422
            I +       +R+ V + ++Q P    +W P G+ L      +GD   + ++ D
Sbjct: 444 RIIIYNARKLPDRITVLN-DIQLPVKGLSWDPIGKYLA---SLEGDKKLRFWATD 494



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 34/168 (20%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSV--------DLQSN--ATER------LTNTLFINISA 307
           R+S +GKR       D ++ ++           +       ER      L       ++ 
Sbjct: 369 RWSPDGKRFAF-GSDDSSVSVWEYVGLINSMGSITGGAQNVERYKECCVLRGHSMEVLTV 427

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTK 365
            +SP+   +   S      ++ +  +      RI+   D +       W P G  +A   
Sbjct: 428 EWSPNGKYLASGSI---DYRIIIYNAR-KLPDRITVLNDIQLPVKGLSWDPIGKYLA--S 481

Query: 366 FSGEKFAIGVMKKDGSQ-ERLLVED--SNLQAPT-----WSPSGRSLI 405
             G+K  +     D  Q  + + E   SN++        WSP G+ L+
Sbjct: 482 LEGDK-KLRFWATDSWQCVKSVTEPFESNIEETMLTRLDWSPDGKYLM 528



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 18/136 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---A 262
           +       +    +SPN + +A  + D     R+ + + R  + P RI     + L    
Sbjct: 416 VLRGHSMEVLTVEWSPNGKYLASGSID----YRIIIYNAR--KLPDRITVLNDIQLPVKG 469

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YSPDSSQI 316
             +   GK    S++ D+ +  ++ D      + +T     NI  +      +SPD   +
Sbjct: 470 LSWDPIGKYLA-SLEGDKKLRFWATD-SWQCVKSVTEPFESNIEETMLTRLDWSPDGKYL 527

Query: 317 VF-ESDREGKEQLYVM 331
           +   + R GK  + ++
Sbjct: 528 MTPAAVRSGKPLIKLI 543


>gi|150015949|ref|YP_001308203.1| peptidase M56, BlaR1 [Clostridium beijerinckii NCIMB 8052]
 gi|149902414|gb|ABR33247.1| peptidase M56, BlaR1 [Clostridium beijerinckii NCIMB 8052]
          Length = 769

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 73/209 (34%), Gaps = 29/209 (13%)

Query: 126 VEFRLWDVKDRKQII-GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           + + L D K+ K I+ GK+  +     +  A  + + I      E+   + R ++V    
Sbjct: 504 ISYDL-DTKEEKVILEGKEGNNKEIGEQYTASELFESIGSRPNVERISSDDRYMYVWNKP 562

Query: 185 VSGIIKNSLC-VMDRDGANIRYLTPSR-------DQILFEPRFSPNQQKVAYATYDDEDI 236
            SG +   +      D  N +++  +        D I   P    +   VA    +  D+
Sbjct: 563 NSGSMSADMTEFAVYDLLNNKFIENNNMIALAYKDNISQNPV---DSSIVAVNNGEYRDM 619

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQ---KDEAMD-------- 283
                +     +A K         ++  P +SS+GK    S     KD+           
Sbjct: 620 YSNKTLGIFDIKANKFTSLIPENQVSMTPDYSSDGKSIAYSGADALKDDMSQSSKNWESE 679

Query: 284 ---IYSVDLQSNATERLTNTLFINISASY 309
              IY V+ ++    ++TN    +    Y
Sbjct: 680 PHYIYQVNTETKEITQITNNKSFDFMPKY 708


>gi|329850912|ref|ZP_08265757.1| dipeptidyl peptidase IV [Asticcacaulis biprosthecum C19]
 gi|328841227|gb|EGF90798.1| dipeptidyl peptidase IV [Asticcacaulis biprosthecum C19]
          Length = 732

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 53/138 (38%), Gaps = 16/138 (11%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S + K  L+ +  D    IY ++  + A +R+T T    + A  SP    + +  D+  
Sbjct: 111 WSGDSKAILVPLDGD----IYLIERATKAVKRITATEGDEVDAKLSPSGDAVAYVRDQTL 166

Query: 325 KEQLYVMQSNGSDQKR------------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             + +      +   +            I+Q++   +    W+P+G  IA+ K       
Sbjct: 167 YIRDFKTDQETAVSPQGADLIAYGTAEFIAQEELDRHSGFWWNPKGGQIAYQKTDEAGVK 226

Query: 373 IGVMKKDGSQERLLVEDS 390
           I    + G +E  +V   
Sbjct: 227 IAERIEIGGEEVKVVHQR 244



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 77/231 (33%), Gaps = 25/231 (10%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALIS-VQKDE-AMD 283
           Y      + +    +       P ++          R  ++S+GK   +  + +D+  +D
Sbjct: 245 YPFAGTPNAVVELFIKNLTGGEPVKLDLGGGDFYLARVNWASDGKALYVQKLSRDQKRLD 304

Query: 284 IYSVDLQSNATE-RLTNTLFINISASYSP---------DSSQIVFESDREGKEQLYVMQS 333
           +   D  + A    LT     + S ++           D +  ++ S+R+G +  Y   S
Sbjct: 305 LLKFDPATGAATTVLT-----DTSDTWVELHNDFKLLSDGT-FIWSSERDGNKHFYFYGS 358

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDS 390
           +G   ++++Q   A       + +   + F          G+ K       +   L +  
Sbjct: 359 DGKLIRQVTQGDWAVDKLSDLNDKTGELFFEASITTPIEHGLYKVSYTTPGEPVALTKAG 418

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDP 440
                T S  G++ I     D  T  +    D  G+    I   A  A  P
Sbjct: 419 GWWTTTVSGGGKAFI-GNYSDPVTPPQTALYDGTGKRVRWIEENALDAQHP 468


>gi|126331215|ref|XP_001364929.1| PREDICTED: similar to WD repeat domain 17 isoform 1 [Monodelphis
           domestica]
          Length = 1272

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 69/197 (35%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P +   +A AT  +      ++ D 
Sbjct: 370 TASFDGTIKVWDINTLTAAYTSPGNEGVIYSVSWAPGDLNCIAGATSRNG----AFIWDV 425

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
              +   R   + ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 426 ERGKMVARFNEHGKNGIFCIAWSHKDSKRIA-TCSGDGFCIIRTID--GKVLHKY-KHPA 481

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + +N     ++     A  F   WSP  + I 
Sbjct: 482 EVFGCDWSQNNKDMIATGCEDKNVRVYYLATNSDQPLKVFSGHTAKVFHVRWSPLREGIL 541

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 542 CSGSDDGTVRIWDYTQD 558


>gi|126331217|ref|XP_001365002.1| PREDICTED: similar to WD repeat domain 17 isoform 2 [Monodelphis
           domestica]
          Length = 1297

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 69/197 (35%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P +   +A AT  +      ++ D 
Sbjct: 387 TASFDGTIKVWDINTLTAAYTSPGNEGVIYSVSWAPGDLNCIAGATSRNG----AFIWDV 442

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
              +   R   + ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 443 ERGKMVARFNEHGKNGIFCIAWSHKDSKRIA-TCSGDGFCIIRTID--GKVLHKY-KHPA 498

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + +N     ++     A  F   WSP  + I 
Sbjct: 499 EVFGCDWSQNNKDMIATGCEDKNVRVYYLATNSDQPLKVFSGHTAKVFHVRWSPLREGIL 558

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 559 CSGSDDGTVRIWDYTQD 575


>gi|270295194|ref|ZP_06201395.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274441|gb|EFA20302.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 741

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 90/279 (32%), Gaps = 37/279 (13%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDEDIL 237
           N+L VM  DG  ++ +T   + I+                 ++P    +A+   ++  + 
Sbjct: 179 NNLYVMTGDGQTLK-VTNEPEGIVCGQSVHRNEFGISKGTFWNPAGDLLAFYRMNESMVT 237

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
              L+D     A      +    +A   S    +  + +          +D+        
Sbjct: 238 PYPLVDITTRIALVDKIRYP---MAGMLS---HQVKVGIYNPATQKTIYLDMGDPKDRYF 291

Query: 298 TNTLFINISASYSPDSSQIVF-ESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           TN        +++PD   +   E +R+    +L    +     +++  ++    +    S
Sbjct: 292 TNI-------TWAPDGKSLYLIELNRDQNHSKLCRYDAESGKLQQVLIEERHPKYVEPQS 344

Query: 356 P------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFS 407
           P            +         + +   +G   + L     L      ++ + + LI  
Sbjct: 345 PILFLPWDSHKFIYQSQRDGFNHLYLYNTEGELLKQLTSGPWLVQDIVGFNRNTKELIIK 404

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
             +     S LY+++L     +LI  P      Q  GFM
Sbjct: 405 STEISPLQSNLYAVNLKNGKRSLIGDPTGMHSAQISGFM 443


>gi|240273531|gb|EER37051.1| acylaminoacyl-peptidase [Ajellomyces capsulatus H143]
 gi|325087435|gb|EGC40745.1| acylaminoacyl-peptidase [Ajellomyces capsulatus H88]
          Length = 671

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/97 (30%), Positives = 41/97 (42%), Gaps = 14/97 (14%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMKK-DGSQERLLVEDSN---- 391
             K     DPV SP G LIAF   +  K        I +++   G+  R++ EDS     
Sbjct: 45  FGKITLASDPVSSPDGRLIAFVGKTWRKLEGQPESRICLIEAIAGAVLRIVGEDSQPAPY 104

Query: 392 -LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               P +SP G  + F   + G  G + Y   L GRN
Sbjct: 105 QDIQPQFSPDGTQISFLSNRGGKGGYRCYL--LRGRN 139



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 51/156 (32%), Gaps = 33/156 (21%)

Query: 258 SMILAPRFSSNGKRALIS------VQKDEAMDIYSVDLQSNATERLTN-----TLFINIS 306
           ++   P  S +G+           ++      I  ++  + A  R+         + +I 
Sbjct: 49  TLASDPVSSPDGRLIAFVGKTWRKLEGQPESRICLIEAIAGAVLRIVGEDSQPAPYQDIQ 108

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +SPD +QI F S+R GK         G    +   +S  +  S     W      +  
Sbjct: 109 PQFSPDGTQISFLSNRGGKGGYRCYLLRGRNFGELAEVSGIETVSVEYARWHSDSAKLL- 167

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                    +G+    GS E           P+W+P
Sbjct: 168 ---------LGISGPRGSDE---------DIPSWAP 185



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 89/288 (30%), Gaps = 46/288 (15%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYA-----TYDDEDILRVYLMDTRIDRAPKRIGNF 256
           N+      +  +  +P  SP+ + +A+        + +   R+ L++       + +G  
Sbjct: 39  NLIEPGFGKITLASDPVSSPDGRLIAFVGKTWRKLEGQPESRICLIEAIAGAVLRIVGED 98

Query: 257 ----RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SAS 308
                   + P+FS +G +      +          L+      L     I       A 
Sbjct: 99  SQPAPYQDIQPQFSPDGTQISFLSNRGGKGGYRCYLLRGRNFGELAEVSGIETVSVEYAR 158

Query: 309 YSPDSSQIVF------ESDRE---GKEQLYVMQSNGSDQKRISQD------------KEA 347
           +  DS++++        SD +      ++     +G+ +  +  D             +A
Sbjct: 159 WHSDSAKLLLGISGPRGSDEDIPSWAPEIQADSCDGTLRSLVVYDSVKEQKLHAIRFPQA 218

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIG-----VMKKDGSQERLLVEDS---NLQAPTWSP 399
           S ++  W      +A       + A       V+      ER++        + +   S 
Sbjct: 219 SVWEAGWCGPSHAVAVMSDGFSESAWYSCRVSVLDLFRGTERIIYTPPPPCQVGSVVSSK 278

Query: 400 SGRSLIFS---RKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWV 443
           SG+   F+       G     +  +D+       L       +D  W+
Sbjct: 279 SGKYAAFTQALSNTRGKVVGIVMIVDVGSSEAWQLDVGGVDVTDVSWL 326


>gi|269129082|ref|YP_003302452.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Thermomonospora curvata DSM 43183]
 gi|268314040|gb|ACZ00415.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Thermomonospora curvata DSM 43183]
          Length = 587

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 69/235 (29%), Gaps = 26/235 (11%)

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
             +   P   P +    + G+  L    V +   D   +                     
Sbjct: 96  PDEPAVPGLEPAYPAGLARGSSGLAV--VGRSTDDGTTIHL----------------CRP 137

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
            AS   + H   D     ++ ++      ++ +  S        +L V+  DG  +  L 
Sbjct: 138 GASPEVLYHHAEDAHVAGLSRDE-----TLIAIGHSEHGDSRHMALRVVRPDGTTVADLW 192

Query: 208 PSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               + ++   FSP          ++      + + D       +   +    I A  + 
Sbjct: 193 DGEGKGVYSCGFSPVAGDSRLLVNHERRGRPELLIWDPVAGTETELHIDLPGEIDA-DWY 251

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS-QIVFES 320
            +    LIS       ++Y  DL      R+     +   A+  PD + +  + S
Sbjct: 252 PDASALLISHSHHARDELYRYDLAGGTLHRIDTPRGVITGATARPDGTVEFAWSS 306



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/264 (13%), Positives = 76/264 (28%), Gaps = 9/264 (3%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             +      +   DR+    R +T   +   +     P  + + +    D D   V++  
Sbjct: 32  RSNATGTWEIYAWDRESGKRRQVTDRPNG-TWMGGVDPTGEWIWWFADTDGDEFGVWMRQ 90

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  +              +       +  +  +      +     + E L +    
Sbjct: 91  PFHGGPDEPAVPGLEPAYPAGLARGSSGLAVVGRSTDDGTTIHLCRPGASPEVLYHHAED 150

Query: 304 NISASYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSP---Q 357
              A  S D + I       G  +   L V++ +G+    +   +    +   +SP    
Sbjct: 151 AHVAGLSRDETLIAIGHSEHGDSRHMALRVVRPDGTTVADLWDGEGKGVYSCGFSPVAGD 210

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             L+   +  G    +      G++  L ++        W P   +L+ S         +
Sbjct: 211 SRLLVNHERRGRPELLIWDPVAGTETELHIDLPGEIDADWYPDASALLISHSHHAR--DE 268

Query: 418 LYSIDLNGRNETLINTPAYASDPQ 441
           LY  DL G     I+TP       
Sbjct: 269 LYRYDLAGGTLHRIDTPRGVITGA 292



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 54/172 (31%), Gaps = 4/172 (2%)

Query: 260 ILAPRFSSNG-KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +  P ++ +   R           +IY+ D +S    ++T+           P    I +
Sbjct: 16  VSLPGWAKDAPSRCTYRSNATGTWEIYAWDRESGKRRQVTDRPNGTWMGGVDPTGEWIWW 75

Query: 319 ESDREGKEQLYVMQSN--GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            +D +G E    M+    G   +      E +Y   +      L    + + +   I + 
Sbjct: 76  FADTDGDEFGVWMRQPFHGGPDEPAVPGLEPAYPAGLARGSSGLAVVGRSTDDGTTIHLC 135

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRN 427
           +   S E L     +      S     +     + GD+    L  +  +G  
Sbjct: 136 RPGASPEVLYHHAEDAHVAGLSRDETLIAIGHSEHGDSRHMALRVVRPDGTT 187


>gi|160891711|ref|ZP_02072714.1| hypothetical protein BACUNI_04166 [Bacteroides uniformis ATCC 8492]
 gi|317478229|ref|ZP_07937395.1| dipeptidyl peptidase IV [Bacteroides sp. 4_1_36]
 gi|156859118|gb|EDO52549.1| hypothetical protein BACUNI_04166 [Bacteroides uniformis ATCC 8492]
 gi|316905622|gb|EFV27410.1| dipeptidyl peptidase IV [Bacteroides sp. 4_1_36]
          Length = 741

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/279 (14%), Positives = 90/279 (32%), Gaps = 37/279 (13%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDEDIL 237
           N+L VM  DG  ++ +T   + I+                 ++P    +A+   ++  + 
Sbjct: 179 NNLYVMTGDGQTLK-VTNEPEGIVCGQSVHRNEFGISKGTFWNPAGDLLAFYRMNESMVT 237

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
              L+D     A      +    +A   S    +  + +          +D+        
Sbjct: 238 PYPLVDITTRIALVDKIRYP---MAGMLS---HQVKVGIYNPATQKTIYLDMGDPKDRYF 291

Query: 298 TNTLFINISASYSPDSSQIVF-ESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           TN        +++PD   +   E +R+    +L    +     +++  ++    +    S
Sbjct: 292 TNI-------TWAPDGKSLYLIELNRDQNHSKLCRYDAESGKLQQVLIEERHPKYVEPQS 344

Query: 356 P------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFS 407
           P            +         + +   +G   + L     L      ++ + + LI  
Sbjct: 345 PILFLPWDSHKFIYQSQRDGFNHLYLYNTEGELLKQLTSGPWLVQDIVGFNRNTKELIIK 404

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
             +     S LY+++L     +LI  P      Q  GFM
Sbjct: 405 STEISPLQSNLYAVNLKNGKRSLIGDPTGMHSAQISGFM 443


>gi|110637434|ref|YP_677641.1| hypothetical protein CHU_1024 [Cytophaga hutchinsonii ATCC 33406]
 gi|110280115|gb|ABG58301.1| possible membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 1026

 Score = 51.2 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/307 (13%), Positives = 91/307 (29%), Gaps = 31/307 (10%)

Query: 132 DVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKG----------DFNSRILFV 180
           D   +  +  + + F          H I D +Y ++   K           D    I + 
Sbjct: 642 DTMRKALLAFQAYEFYKENGGNVNQHEIYDGLYYALKNLKVKDYNALHAHKDAVRSIAYT 701

Query: 181 SESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDIL 237
           ++     +      +   D   AN +  T             S N   +A          
Sbjct: 702 ADGKGMYTAGSDGKIFSWDMTAANPKPKTVYNTNYALGALSLSSNGTMLA---SGGASPN 758

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
              +  T+   AP  +   +  +L   FS + +  + S   D  + I+  +L S     +
Sbjct: 759 IRMVNLTKEGDAPLLLKGHKKTVLYTAFSPDNQTLV-SASADSTVMIW--NLSSGVPITV 815

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   + S  P    I   +D+     + +          +      + +   +S  
Sbjct: 816 YRDRHNIKAVSLHPKGRVIAVANDKGETMIISLYN---EFTPYLIDRGTTADYSLQYSHD 872

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTG 415
           G+ +A    SG    I +M  +G +  + +    + +    +S     L        D  
Sbjct: 873 GEFLAIANNSG---LIKIMDVEGRRLVVALPGHKARVNEMKFSKDDSKLA---SASFDGT 926

Query: 416 SKLYSID 422
            +++ + 
Sbjct: 927 IRVWDLS 933



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 68/208 (32%), Gaps = 16/208 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            +   L     + +    FSP+ Q +  A+ D      V + +      P  +   R  I
Sbjct: 768 GDAPLLLKGHKKTVLYTAFSPDNQTLVSASADS----TVMIWNLSSG-VPITVYRDRHNI 822

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            A      G+   ++  K E M I   +  +     +      + S  YS D   +   +
Sbjct: 823 KAVSLHPKGRVIAVANDKGETMIISLYNEFT--PYLIDRGTTADYSLQYSHDGEFLAIAN 880

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +      + +M   G          +A   +  +S     +A   F G    I V     
Sbjct: 881 NSG---LIKIMDVEGRRLVVALPGHKARVNEMKFSKDDSKLASASFDGT---IRVWDLSE 934

Query: 381 SQERLLV---EDSNLQAPTWSPSGRSLI 405
             E+ L+     + + + T++  G  LI
Sbjct: 935 LSEQPLILKDHTNWVWSMTFNAEGDKLI 962


>gi|291233392|ref|XP_002736640.1| PREDICTED: Dipeptidyl Peptidase Four (IV) family member
           (dpf-4)-like [Saccoglossus kowalevskii]
          Length = 623

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 16/126 (12%)

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVMKK------ 378
           VM +  + ++ I       Y +P  SP G  I + +++          +           
Sbjct: 168 VMINPETKEQIILASGFDFYSNPRVSPDGSKICWIQWNHPNMPWNDTQLWTAHMKPDGSG 227

Query: 379 --DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             DGS++++ + + ++++P+WSPS   L +   K       LY I  NG +E L      
Sbjct: 228 IIDGSEKQIDIGNVSVRSPSWSPSSE-LYYICDK--TKWWNLYRIQKNGEHEVLFEQQRE 284

Query: 437 ASDPQW 442
              P W
Sbjct: 285 IGGPAW 290



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 57/191 (29%), Gaps = 50/191 (26%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + +  S       PR SP+  K+ +  ++  ++                          
Sbjct: 176 EQIILASGFDFYSNPRVSPDGSKICWIQWNHPNMPWNDTQLWTAHMK------------- 222

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
                +G   +                   + +++        S S+SP SS++ +  D+
Sbjct: 223 ----PDGSGII-----------------DGSEKQIDIGNVSVRSPSWSP-SSELYYICDK 260

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                LY +Q NG  +  +  +++     P W          KF    + +      GS 
Sbjct: 261 TKWWNLYRIQKNGEHE--VLFEQQREIGGPAW----------KFGTCSYKL---DPQGSG 305

Query: 383 ERLLVEDSNLQ 393
             +     +L+
Sbjct: 306 HCITTYGGDLE 316



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 10/84 (11%), Positives = 30/84 (35%), Gaps = 12/84 (14%)

Query: 373 IGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDT---GSKLYSID------ 422
           I ++  +  ++ +L    +  + P  SP G  + + +    +     ++L++        
Sbjct: 167 IVMINPETKEQIILASGFDFYSNPRVSPDGSKICWIQWNHPNMPWNDTQLWTAHMKPDGS 226

Query: 423 --LNGRNETLINTPAYASDPQWVG 444
             ++G  + +         P W  
Sbjct: 227 GIIDGSEKQIDIGNVSVRSPSWSP 250


>gi|254502750|ref|ZP_05114901.1| hypothetical protein SADFL11_2789 [Labrenzia alexandrii DFL-11]
 gi|222438821|gb|EEE45500.1| hypothetical protein SADFL11_2789 [Labrenzia alexandrii DFL-11]
          Length = 320

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 85/218 (38%), Gaps = 25/218 (11%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           AY    +  I  V + +T        +   ++ +LA   S +GK  + S    +   IY+
Sbjct: 17  AYVATGEGAIHFVEVGETH-------LAPHKNGLLAAEPSFDGKSLITS---GDDGAIYA 66

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                ++              +  P+ + + F S R      +V  S+G +++      +
Sbjct: 67  SSPDGSSELLAERPRKWIDLIACGPNGA-VAFASGRT----AWVRLSDGREKE---FAHD 118

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +     ++P+G  +A +++ G    +     +G    L  + ++L   ++SP G+ L+ 
Sbjct: 119 RAVGGIAFAPKGLRLAVSRYDGAT--LWWAGTEGKPVNLTWKGAHLGT-SFSPDGKYLVT 175

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           + +++   G +L     + ++  +   PA      W  
Sbjct: 176 AMQENALHGWRL----SDNQDMRMTGYPAKVKSFSWSA 209



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 27/236 (11%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +  V   DG   R    + D+ +    F+P   ++A + YD        L     +  P
Sbjct: 101 RTAWVRLSDG---REKEFAHDRAVGGIAFAPKGLRLAVSRYDG-----ATLWWAGTEGKP 152

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             +  ++   L   FS +GK  + ++Q++ A+  +   L  N   R+T       S S+S
Sbjct: 153 VNLT-WKGAHLGTSFSPDGKYLVTAMQEN-ALHGWR--LSDNQDMRMTGYPAKVKSFSWS 208

Query: 311 PDSSQIVFESDREGKEQLYVMQ------SNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
                +       G     V          G    ++    +         P+ + +A  
Sbjct: 209 AKGKYLA----TSGANAAIVWPFFGKTGPMGQSPLQLGTRSDVLVTAVACHPKEEAVALG 264

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKL 418
              G    + + + + + E LL         +  W  +G  L F  +K+      L
Sbjct: 265 YQDG---MVMMSRFEDNAEVLLRRPGGHPITSLDWDNAGLRLAFGSEKNEAGIISL 317


>gi|195999118|ref|XP_002109427.1| hypothetical protein TRIADDRAFT_37206 [Trichoplax adhaerens]
 gi|190587551|gb|EDV27593.1| hypothetical protein TRIADDRAFT_37206 [Trichoplax adhaerens]
          Length = 299

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/284 (13%), Positives = 86/284 (30%), Gaps = 26/284 (9%)

Query: 166 ITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRFSPNQ 223
           +TG +G+  +        V  S   +  + + +  G    Y +       + +  FS + 
Sbjct: 3   LTGHEGEIYTAKFHPDGEVLASASFERKIFLWNIYGECENYAILEGHKGAVLDLHFSTDG 62

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            ++  A+ D        + D    +  K+      ++ +   S  G + L++   D    
Sbjct: 63  SQLFSASTDK----TAAIWDFESGQRTKKFKGHTGIVNSCHPSRRGTQMLVTGSDDCTAK 118

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRIS 342
           ++  D++         + +   + S++    QI+      G +  + V     ++     
Sbjct: 119 LW--DVRRREPVHSFQSNYQVTAVSFNDTGDQII----SGGLDNVIRVWDLRKNNIMYSM 172

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQA-----P 395
                +      SP G  +           + I          ++     +         
Sbjct: 173 SGHLDTITSLSVSPDGCYVMSNAMDNSVRIWDIRPYVPGDRCLKIFTGAQHNFEKNLLKC 232

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +WSP G+ +       G     +Y  D   R   L   P +   
Sbjct: 233 SWSPDGKKIA-----AGSADRFVYVWDTATR-RILYKLPGHDGS 270


>gi|148226456|ref|NP_001079883.1| POC1 centriolar protein homolog A [Xenopus laevis]
 gi|33417154|gb|AAH56099.1| MGC69111 protein [Xenopus laevis]
          Length = 399

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 65/188 (34%), Gaps = 15/188 (7%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + + +      R    +  IL+  FS +G     S  +D+ + ++   ++   +     
Sbjct: 1   MVWNMKTQMRAYRFVGHKDAILSVDFSPSGHLIA-SASRDKTVRLWVPSVK-GESTAFKA 58

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQG 358
                 S S+S D   +V  SD    ++   + +    +   S ++  ++     +SP G
Sbjct: 59  HTGTVRSVSFSGDGQSLVTASD----DKTIKVWTVHRQKFLFSLNQHINWVRCAKFSPDG 114

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            LI           I +  K   +           +    + PSG  +  +     D   
Sbjct: 115 RLIVSASDDKT---IKLWDKTSRECIQSFCEHGGFVNFVDFHPSGTCIAAAAT---DNTV 168

Query: 417 KLYSIDLN 424
           K++ I +N
Sbjct: 169 KVWDIRMN 176



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 40/312 (12%), Positives = 87/312 (27%), Gaps = 47/312 (15%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           ++R + H   D I        G            + S     ++ +             +
Sbjct: 11  AYRFVGHK--DAILSVDFSPSG----------HLIASASRDKTVRLWVPSVKGESTAFKA 58

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    FS + Q +  A+ D      + +      +    +    + +   +FS +G
Sbjct: 59  HTGTVRSVSFSGDGQSLVTASDDK----TIKVWTVHRQKFLFSLNQHINWVRCAKFSPDG 114

Query: 270 KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R ++S   D+ + ++  D  S    +             + P  + I   +       +
Sbjct: 115 -RLIVSASDDKTIKLW--DKTSRECIQSFCEHGGFVNFVDFHPSGTCIAAAAT---DNTV 168

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V     +   +  Q          + P G+ +           + ++     + RLL  
Sbjct: 169 KVWDIRMNKLIQHYQVHSGVVNSLSFHPSGNYLITASNDSTLKVLDLL-----EGRLLYT 223

Query: 389 DSNLQAPT----WS----------PSGRSLIFSRKKDGDTGSKLYSIDLN-----GRNET 429
               Q P     +S             + +++    D  +   L     N     G + T
Sbjct: 224 LHGHQGPVTCVKFSREGDFFASGGSDEQVMVWKTNFDAGSYPDLLKYRQNDTFPSGGDYT 283

Query: 430 LINTPAYASDPQ 441
            I  PA    P 
Sbjct: 284 SIVQPADVHQPA 295


>gi|163942105|ref|YP_001646989.1| hypothetical protein BcerKBAB4_4202 [Bacillus weihenstephanensis
           KBAB4]
 gi|163864302|gb|ABY45361.1| conserved hypothetical protein [Bacillus weihenstephanensis KBAB4]
          Length = 412

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/256 (14%), Positives = 82/256 (32%), Gaps = 51/256 (19%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +S I     + V      +  +  + G   + +T    + +  P++S N + +AYA    
Sbjct: 18  SSSITSAENNGVKVAFIRNHNLWIKVGEKEKQITKG--EYITGPKWSHNGEWLAYAKGKK 75

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            +   +Y +     +  K++   +S     ++S           +     + + D +   
Sbjct: 76  RNHFELYRL-----KDGKKVIPSQSEASNYQWSPTENIIAFVFAR----TLNTFDAEKKK 126

Query: 294 T--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-- 349
              E + N +      ++ PD  + +  S+       +     G+    I +D   +   
Sbjct: 127 ADFENVANGVGDY---AWYPDGKKFLVSSEAYLLPTGWT----GAQLYEIQKDANMNPHK 179

Query: 350 -------------------FDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS---- 381
                                  WSP    I+F        S +   + +++ DGS    
Sbjct: 180 MKHLYALPNEHDDFLALVGSGFKWSPDQKWISFLVVPTASLSADSNTLCLIRSDGSRFET 239

Query: 382 -QERLLVEDSNLQAPT 396
             + LL       AP+
Sbjct: 240 VDQMLLNTQWFKWAPS 255



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 21/159 (13%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG +      ++  + I          +++T   +I     +S +   + +   ++ +  
Sbjct: 27  NGVKVAFI--RNHNLWIKV----GEKEKQITKGEYI-TGPKWSHNGEWLAYAKGKK-RNH 78

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLL 386
             + +     +   SQ + ++Y    WSP  ++IAF    +   F     K D       
Sbjct: 79  FELYRLKDGKKVIPSQSEASNY---QWSPTENIIAFVFARTLNTFDAEKKKADFENVANG 135

Query: 387 VEDSNLQAPTWSPSGRSLIFSRK----KDGDTGSKLYSI 421
           V D       W P G+  + S +      G TG++LY I
Sbjct: 136 VGDY-----AWYPDGKKFLVSSEAYLLPTGWTGAQLYEI 169



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 41/88 (46%), Gaps = 10/88 (11%)

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G  +AF +       + +  K G +E+ + +   +  P WS +G  L +++ K      
Sbjct: 27  NGVKVAFIR----NHNLWI--KVGEKEKQITKGEYITGPKWSHNGEWLAYAKGKK-RNHF 79

Query: 417 KLYSIDLNGRNETLINTPAYASDPQWVG 444
           +LY +  +G+   +I + + AS+ QW  
Sbjct: 80  ELYRLK-DGKK--VIPSQSEASNYQWSP 104


>gi|163848175|ref|YP_001636219.1| peptidase S9 prolyl oligopeptidase [Chloroflexus aurantiacus
           J-10-fl]
 gi|222526080|ref|YP_002570551.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Chloroflexus sp. Y-400-fl]
 gi|163669464|gb|ABY35830.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Chloroflexus aurantiacus J-10-fl]
 gi|222449959|gb|ACM54225.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Chloroflexus sp. Y-400-fl]
          Length = 629

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 51/140 (36%), Gaps = 19/140 (13%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKE----QLYVMQS--NG- 335
           + +VDL S A   L        +   SPD + + +   D         +L+V     +G 
Sbjct: 148 LVAVDLDSGAITPLHTGRDFVAAPRLSPDGNWLAWLAWDHPNMPWDAAELWVAPILEDGS 207

Query: 336 -SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
               ++++     S F P W+  G ++   + +G  + +  +   G+   L   D+    
Sbjct: 208 LGSARQLAGGAGDSCFQPEWTTDGQVLVVAERTG-WWNLYRLDLAGNATPLYPLDAEFGQ 266

Query: 395 PTWSP---------SGRSLI 405
           P W P          GR L 
Sbjct: 267 PLWQPGMRTYVPLADGRVLA 286


>gi|308321562|gb|ADO27932.1| WD repeat-containing protein 61 [Ictalurus furcatus]
          Length = 305

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/168 (14%), Positives = 54/168 (32%), Gaps = 9/168 (5%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D +         +     +   FSP+ + +A  ++  +    V +      +    
Sbjct: 88  IRLWDLESGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGK----VNIFGIESGKKEYS 143

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      IL+  +S +GK    S   D  ++I+ +         L        S ++SPD
Sbjct: 144 LDTRGKFILSIAYSPDGKYLA-SGAIDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPD 201

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           S  +V  SD      + +     ++         +       SP    
Sbjct: 202 SQLLVTASD---GGYIKIYDVQHANLAGTLSGHASWVLSVASSPDNTH 246



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 58/209 (27%), Gaps = 26/209 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +++        +     S N    A ++ D      + L D    +  K +         
Sbjct: 56  LQWTLEGHQLGVVSVDISHNGAIAASSSLDA----HIRLWDLESGKQIKSMDAGPVDAWT 111

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESD 321
             FS + K    +      ++I+ ++        L T   FI +S +YSPD   +     
Sbjct: 112 VAFSPDSKYIA-TGSHLGKVNIFGIE-SGKKEYSLDTRGKFI-LSIAYSPDGKYLA---S 165

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-VMKKDG 380
                 + +            +          +SP   L+  T   G    I  V   + 
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV-TASDGGYIKIYDVQHAN- 223

Query: 381 SQERLLVEDSNLQAPTW------SPSGRS 403
                 +  +     +W      SP    
Sbjct: 224 ------LAGTLSGHASWVLSVASSPDNTH 246



 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 77/223 (34%), Gaps = 40/223 (17%)

Query: 102 DWNSLGAQV-LVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W   G Q+ +V+  +   G       L    RLWD++  KQI  K   + P     +A 
Sbjct: 57  QWTLEGHQLGVVSVDISHNGAIAASSSLDAHIRLWDLESGKQI--KSMDAGPVDAWTVA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D                   S+ + +G     + +   +     Y   +R + +  
Sbjct: 114 -FSPD-------------------SKYIATGSHLGKVNIFGIESGKKEYSLDTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQI 316
                + IY V   +L       L+      +S + SPD++  
Sbjct: 209 SDGGYIKIYDVQHANLAGT----LSGHASWVLSVASSPDNTHF 247



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 25/79 (31%), Gaps = 1/79 (1%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +       Q +         +   +SP    IA     G K  I  ++    +  L 
Sbjct: 87  HIRLWDLESGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLG-KVNIFGIESGKKEYSLD 145

Query: 387 VEDSNLQAPTWSPSGRSLI 405
                + +  +SP G+ L 
Sbjct: 146 TRGKFILSIAYSPDGKYLA 164


>gi|156537650|ref|XP_001607842.1| PREDICTED: similar to conserved hypothetical protein [Nasonia
           vitripennis]
          Length = 815

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 82/227 (36%), Gaps = 13/227 (5%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
               + G  I  +  +  + +     + + +++   +   +  +RV+ +   + R    +
Sbjct: 431 AFTPQTGRLIFAILHAHVKAVSAITLTKDGKRII--SGGCDGQVRVWEVLAAVQRLVCIL 488

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
              R  + +   + +    +IS   D    ++  D+     +++     + ++A +SP+ 
Sbjct: 489 KEHRGSVTSLNINHDSTE-VISSSTDGTCIVW--DIDRGVRKQVLMGTTMYMAACFSPNG 545

Query: 314 SQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            QI+   +DR   +  Y    +GS  + +      +      SP G     T  +     
Sbjct: 546 VQILTCGTDR---KITYWETLDGSMVREVEGSGSGALNSINISPDGQYFV-TGGNDSIVK 601

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +   +   +    +   + + A   SP G+ ++      GD    ++
Sbjct: 602 LWSYETGETTHAGMGHAAIITACKISPDGKHIV---TVSGDGAIMIW 645



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 52/160 (32%), Gaps = 9/160 (5%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  V+S     +  V D D   +R        +     FSPN  ++     D +     Y
Sbjct: 504 STEVISSSTDGTCIVWDID-RGVRKQVLMGTTMYMAACFSPNGVQILTCGTDRK---ITY 559

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TN 299
                     +  G+    + +   S +G+   ++   D  + ++S   ++  T      
Sbjct: 560 WETLDGSMVREVEGSGSGALNSINISPDGQY-FVTGGNDSIVKLWSY--ETGETTHAGMG 616

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              I  +   SPD   IV  S  +G   ++         +
Sbjct: 617 HAAIITACKISPDGKHIVTVSG-DGAIMIWKCPFEMKSAR 655



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             +    S IL+ +E V+ G   + +  +     ++R L       +++  F  +  ++ 
Sbjct: 320 NVRSAVTSMILWKNEFVIVGTALSEIYQVKLSDFDMRLLVTCHTSTIYDVAFPHDYSEI- 378

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
              +       + L      +   RI     +  +  FS +G+  + S   D  +  ++ 
Sbjct: 379 ---FATGSKNDIRLWRLETQKELLRITVPNIVCTSLYFSYDGRMLV-SAWNDGIIRAFT- 433

Query: 288 DLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                    + +     +SA + + D  +I+     +G+ +++ + +       I ++  
Sbjct: 434 PQTGRLIFAILHAHVKAVSAITLTKDGKRII-SGGCDGQVRVWEVLAAVQRLVCILKEHR 492

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSG---- 401
            S      +     +  +   G      V   D G ++++L+  +   A  +SP+G    
Sbjct: 493 GSVTSLNINHDSTEVISSSTDGTCI---VWDIDRGVRKQVLMGTTMYMAACFSPNGVQIL 549

Query: 402 -----RSLIFSRKKDGDTGSKL 418
                R + +    DG    ++
Sbjct: 550 TCGTDRKITYWETLDGSMVREV 571


>gi|315049279|ref|XP_003174014.1| periodic tryptophan protein 2 [Arthroderma gypseum CBS 118893]
 gi|311341981|gb|EFR01184.1| periodic tryptophan protein 2 [Arthroderma gypseum CBS 118893]
          Length = 958

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 83/210 (39%), Gaps = 20/210 (9%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +A+ +     +L V+   +      K+ G+  SM  A  +S +G++  I+   D  + 
Sbjct: 352 EWLAFGSSKLGQLL-VWEWQSE-SYILKQQGHLDSMN-ALVYSPDGRKI-ITAADDGKIK 407

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           ++ ++         T       +  ++   + ++F S  +G  + + +     + K  + 
Sbjct: 408 VWDIN-TGFCIVTFTEHKSGVTACEFTKRGN-VLFTSSLDGSVRAWDL-VRYRNFKTFTA 464

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSP 399
               S+      P G+++         F I +        +LL + S  + P    ++S 
Sbjct: 465 PSRLSFSSLAVDPSGEVVCAGSLD--SFDIHIWSVQTG--QLLDQLSGHEGPVSSLSFSA 520

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            G  ++ +     D   +++S+   GR++T
Sbjct: 521 DGSHVVSASW---DRTVRIWSVF--GRSQT 545



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D   +++   +  +   ++      + +  FS++G   ++S   D  + I+SV  +S  +
Sbjct: 488 DSFDIHIWSVQTGQLLDQLSGHEGPVSSLSFSADGSH-VVSASWDRTVRIWSVFGRSQTS 546

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           E L       +  ++ PD  Q+   S  +G+   + +
Sbjct: 547 EPL-QLQSDVLCVAFRPDGKQVA-ASTLDGQLTFWSV 581



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 5/81 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  +    FS +   V  A++D      V +               +S +L   F 
Sbjct: 506 LSGHEGPVSSLSFSADGSHVVSASWDR----TVRIWSVFGRSQTSEPLQLQSDVLCVAFR 561

Query: 267 SNGKRALISVQKDEAMDIYSV 287
            +GK+   +   D  +  +SV
Sbjct: 562 PDGKQVA-ASTLDGQLTFWSV 581


>gi|196229795|ref|ZP_03128659.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
 gi|196226121|gb|EDY20627.1| WD-40 repeat protein [Chthoniobacter flavus Ellin428]
          Length = 1028

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 54/157 (34%), Gaps = 7/157 (4%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                +    F+PN+ ++          +  +   T+     +  G  +S +   RFS +
Sbjct: 523 HHSAAVNWVDFAPNENRLV-TAAGPRATVWSFTDRTKPLAVIQHPGKKKSELKCARFSPD 581

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           GK  L++V  D    I+  D ++     + N       A +SPD S++V   D     Q 
Sbjct: 582 GK-LLVTVSTDGTARIW--DAKTWRPVSVINRHNALWCARFSPDGSRMVVTGD---DVQA 635

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            V  +                F  V +     +A T 
Sbjct: 636 VVYDTKTWKPVGTPVLAPGPVFSAVITEDNRFLAITS 672



 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/312 (13%), Positives = 94/312 (30%), Gaps = 69/312 (22%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  +  S     ++            +      ++    FSP+ + +A  T D E     
Sbjct: 370 MRAATASSDGHATIWTTRNGAQRGERILHGGPVLVM--TFSPDDKVLATGTADGE----A 423

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERL 297
            L  T        + N  +      +S++G+  + + +   A+   S  VD    A ++ 
Sbjct: 424 RLWRTNGGMPLTTVRNHNARARTAFYSADGQHLVTASEDHTALHWISGHVDPYGPAMQQ- 482

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLY-------------------VMQSNGSDQ 338
                    A ++ D+S+I+  SD  G  QL+                    +    ++ 
Sbjct: 483 ---RGKVTCAVFNADASRIL-TSDTSGDAQLWDAKKGRVDGKPYHHSAAVNWVDFAPNEN 538

Query: 339 KRISQDKEASYFDP------------------------VWSPQGDLIAFTKFSGEKFAIG 374
           + ++     +                             +SP G L+      G      
Sbjct: 539 RLVTAAGPRATVWSFTDRTKPLAVIQHPGKKKSELKCARFSPDGKLLVTVSTDGTA---R 595

Query: 375 VMKKDGSQERLLVEDSNL-QAPTWSPSG-RSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +      +   ++   N      +SP G R ++        TG  + ++  + +    + 
Sbjct: 596 IWDAKTWRPVSVINRHNALWCARFSPDGSRMVV--------TGDDVQAVVYDTKTWKPVG 647

Query: 433 TPAYASDPQWVG 444
           TP  A  P +  
Sbjct: 648 TPVLAPGPVFSA 659



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 55/329 (16%), Positives = 95/329 (28%), Gaps = 54/329 (16%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V KEG        R+WD   +K +  +     PA    +A   S           G F  
Sbjct: 165 VTKEGG------LRIWDTAAKKPVFEE---GKPAQPVTVARRSS---------RGGIFVI 206

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
                    V       +      G  +  L  SR  +                      
Sbjct: 207 ATAGGVIQAVDIEAGKVIAEFHMQGGAVTALAMSRSGMKLAAA---------------GS 251

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK------DEAMDIYSVDL 289
              V + +    +   +    +  ++A  FS++ +  L + ++      +    +  +  
Sbjct: 252 DHMVRVWNLETAKEIGKGLPHQGAVIALDFSADERYVLTAGEEKIARLWNPEEGVMVMPA 311

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            S     +T        A  SPD S I       G   +    +    +  +S  +EA  
Sbjct: 312 MSCGET-ITK-------ARVSPDGSMI---GTLLGDGSVQFWDALTGAKLPVSLHEEAPM 360

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            D VW+  G   A     G              ER+L     +   T+SP  + L     
Sbjct: 361 NDFVWARTGMRAATASSDGHATIWTTRNGAQRGERIL-HGGPVLVMTFSPDDKVLA---T 416

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYAS 438
              D  ++L+  +      T+ N  A A 
Sbjct: 417 GTADGEARLWRTNGGMPLTTVRNHNARAR 445


>gi|315044931|ref|XP_003171841.1| minichromosome loss protein 1 [Arthroderma gypseum CBS 118893]
 gi|311344184|gb|EFR03387.1| minichromosome loss protein 1 [Arthroderma gypseum CBS 118893]
          Length = 851

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 66/190 (34%), Gaps = 18/190 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S +++ VA A+    D L V +++       K +      +    F  +G+   +S  
Sbjct: 104 AISKDEEWVAVAS----DELTVKIVNINDITEVKYLREQTKGVKHVTFDPSGRFVTVS-C 158

Query: 278 KDEAMDIYS--------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            D  + IYS        +       +RL         A + PD +   F +    ++   
Sbjct: 159 ADGIIYIYSFTETEPTLLHKLDGVIQRLETDNEATSRAVWHPDGT--AFATVEATRDITV 216

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +   + + Q++ S           WSP G ++A    +G    + + +    +     + 
Sbjct: 217 ISSRDWTKQRKFSGGHNGDITCLAWSPNGAMLA---SAGADRKLLLWETRTQKVIKTYDI 273

Query: 390 SNLQAPTWSP 399
            N+    W P
Sbjct: 274 PNVINFRWHP 283



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 36/252 (14%), Positives = 73/252 (28%), Gaps = 22/252 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMI 260
           + PS   +   P  +P    + Y               + +  T  D  P+ I     M 
Sbjct: 1   MAPSSFSLRGRPAHTPGTTVLTYTPNGKHIITAGSNSGIRVFTTGEDGEPQTI--DEGME 58

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                ++  +  ++   +D  + +Y +  +    + L          + S D   +   S
Sbjct: 59  AHLAIAATNESMIL-GSEDGTVWLYKLP-EGTMDKPLARCTLPVRDLAISKDEEWVAVAS 116

Query: 321 DREGKEQLYVMQSN--------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           D    + + +                K ++ D     F  V    G  I +     E   
Sbjct: 117 DELTVKIVNINDITEVKYLREQTKGVKHVTFDPSGR-FVTVSCADG--IIYIYSFTETEP 173

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             + K DG  +RL  ++       W P G    F+  +     + + S D   + +    
Sbjct: 174 TLLHKLDGVIQRLETDNEATSRAVWHPDGT--AFATVEATRDITVISSRDWTKQRKFSGG 231

Query: 433 TPAYASDPQWVG 444
                +   W  
Sbjct: 232 HNGDITCLAWSP 243


>gi|302565284|ref|NP_001180625.1| WD repeat-containing protein 38 [Macaca mulatta]
          Length = 314

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 52/160 (32%), Gaps = 8/160 (5%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +  T   R  K  G     + +  FS +G+  L +  +D  +  +          RL   
Sbjct: 5   VPATLAVRRVKFFGRHGGEVNSSAFSPDGQMLL-TGSEDGCVYGWET-RSGQLLWRLGGH 62

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   +SPD       S       + +     +   ++ +  + S     +SP    
Sbjct: 63  TGPVKFCRFSPDGHLFASASC---DCTVRLWDVARAKCLQVLKGHQRSVETVSFSPDSRQ 119

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSP 399
           +A   +        V    G   RLLV   + +Q+  +SP
Sbjct: 120 LASGGWDKRVMLWEVQS--GQMLRLLVGHRDSVQSSDFSP 157



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +    FSP+ Q +   + D      VY  +TR  +   R+G     +   RF
Sbjct: 16  FFGRHGGEVNSSAFSPDGQMLLTGSEDG----CVYGWETRSGQLLWRLGGHTGPVKFCRF 71

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G     S   D  + ++ V  ++   + L        + S+SPDS Q+         
Sbjct: 72  SPDG-HLFASASCDCTVRLWDV-ARAKCLQVLKGHQRSVETVSFSPDSRQLA---SGGWD 126

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +++ + +       R+      S     +SP  + +A   +      I +        
Sbjct: 127 KRVMLWEVQSGQMLRLLVGHRDSVQSSDFSPTVNCLATGSWDTT---IRIWDLRTGTP 181



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/226 (13%), Positives = 73/226 (32%), Gaps = 20/226 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D   A    +     + +    FSP+ +++A   +D     RV L + +
Sbjct: 80  SASCDCTVRLWDVARAKCLQVLKGHQRSVETVSFSPDSRQLASGGWDK----RVMLWEVQ 135

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT----ERLTNTL 301
             +  + +   R  + +  FS        +   D  + I+  DL++       + L    
Sbjct: 136 SGQMLRLLVGHRDSVQSSDFSPTVNCLA-TGSWDTTIRIW--DLRTGTPAVSHQALEGHS 192

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  YS         +     + +++ +   S      +          +SP    +
Sbjct: 193 GNISCLCYSASG----LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWL 248

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
           A    +G    + V   +  +    ++          ++P G+ L+
Sbjct: 249 A---SAGYSRMVKVWDCNTGKCLETLKGVLDVAHTCAFTPDGKILV 291


>gi|190149577|ref|YP_001968102.1| translocation protein TolB precursor [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|189914708|gb|ACE60960.1| translocation protein TolB precursor [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
          Length = 62

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDPQWVGF 445
                 ++P+ SP+G  +I+S  K      +L  +  +GR +  L         P W  +
Sbjct: 2   SSTFLDESPSISPNGIMVIYSSTKGTSKVLQL--VSADGRFKANLPGAGGQFKFPAWSPY 59

Query: 446 M 446
           +
Sbjct: 60  L 60



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSP 399
            P  SP G ++ ++   G    + ++  DG  +  L       + P WSP
Sbjct: 9   SPSISPNGIMVIYSSTKGTSKVLQLVSADGRFKANLPGAGGQFKFPAWSP 58


>gi|157134516|ref|XP_001656349.1| wd-repeat protein [Aedes aegypti]
 gi|108881387|gb|EAT45612.1| wd-repeat protein [Aedes aegypti]
          Length = 381

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 93/261 (35%), Gaps = 26/261 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              VSG   N+  V + +         +   ++ +  +SP+ + VA A+ D    +++++
Sbjct: 27  NRFVSGSTDNTAIVWNINEQVRCMRFEAHTDVVNDICWSPDGRIVASASKD--RTVKIWV 84

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                +    R     S I +  F S GK+  I+   D+++ ++ V  +       T   
Sbjct: 85  PSLMGNCDEFR--AHTSNIRSVDFDSKGKKL-ITASDDKSVKLWKVSRKH-FVSSFTGHT 140

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                A +SP+   I    D      L +             D++ +     W P G L+
Sbjct: 141 NWVRCARFSPNDKLIASCGD---DRALKLFDPQSGQCVHSFVDQKGAGNKVAWHPDGTLV 197

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE-----DSNLQAPTWSPSGRSLIFSRKKDGDT-- 414
           A       +  I  +K      R L++     + ++ +  + PSG  LI           
Sbjct: 198 A-IALDNARVKIFDIK-----IRKLIQYYRIFEGSVNSLDFHPSGNYLITGSDDGAVKII 251

Query: 415 ----GSKLYSIDLNGRNETLI 431
               G  +Y++  +    T +
Sbjct: 252 DLLEGRHIYTLTGHTGPVTAV 272


>gi|58039196|ref|YP_191160.1| oligopeptidase B [Gluconobacter oxydans 621H]
 gi|58001610|gb|AAW60504.1| Oligopeptidase B [Gluconobacter oxydans 621H]
          Length = 666

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 14/140 (10%)

Query: 311 PDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVW--------SPQGDLI 361
           PD     +    +G +  L V +  G  ++++  D +A      +        SP     
Sbjct: 63  PDGPWEYYVRFEDGAQHPLRVRRPRGGGEEQVLLDADALAKQHDYYALSQTDHSPDHRYF 122

Query: 362 AFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            + +     E + I V   +  +       S   +   SP  + L +  + D    SK+Y
Sbjct: 123 VYAEDIQGSEVYRIQVEDLETGELCAPPVPSTTGSFAISPDSQWLFWIYRDDNGRPSKIY 182

Query: 420 SIDLNGRNETLI---NTPAY 436
              L G  + L+     P +
Sbjct: 183 RRPLPGGEDVLVFDETDPGF 202



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 42/137 (30%), Gaps = 12/137 (8%)

Query: 267 SNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASY--------SPDSSQI 316
            +G        +D A     V         + L +   +     Y        SPD    
Sbjct: 63  PDGPWEYYVRFEDGAQHPLRVRRPRGGGEEQVLLDADALAKQHDYYALSQTDHSPDHRYF 122

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIG 374
           V+  D +G E   +   +    +  +    ++      SP    +   +   +G    I 
Sbjct: 123 VYAEDIQGSEVYRIQVEDLETGELCAPPVPSTTGSFAISPDSQWLFWIYRDDNGRPSKIY 182

Query: 375 VMKKDGSQERLLVEDSN 391
                G ++ L+ ++++
Sbjct: 183 RRPLPGGEDVLVFDETD 199


>gi|37520150|ref|NP_923527.1| acylamino-acid-releasing enzyme [Gloeobacter violaceus PCC 7421]
 gi|35211143|dbj|BAC88522.1| acylamino-acid-releasing enzyme [Gloeobacter violaceus PCC 7421]
          Length = 668

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 81/252 (32%), Gaps = 40/252 (15%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            +     PR SP+ +++A+   D  ++L+V++     +       + +  I    ++ N 
Sbjct: 43  GNPERTSPRLSPDGKRLAWLAPDKNNVLQVWVKTIGQNDDKVVTADKKRGIRFFTWAYNN 102

Query: 270 KRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINIS-----ASYSPDSSQIVFESDR 322
           +  +    +  DE   +Y VDL +      T    +         +Y PD    V  S  
Sbjct: 103 RTLIYQQDLDGDENFHLYGVDLPTAQVRDFTPFKGVRAGIAAIDPAY-PDG---VLVSLN 158

Query: 323 EGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +   Q   +Y +     + K +  +         W     L              V   D
Sbjct: 159 KRNPQLFDIYRLDLKTGELK-LDTENPGDVLG--WGADAKLAVRAAQ--------VKNAD 207

Query: 380 GSQERLLVEDSNL--------------QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           GS E  + + +                +   ++  G S    R   G    ++    +N 
Sbjct: 208 GSNEIRIRDSAKAPWKSRLKAGPTEILEFVDFTADGES-AVLRSSLGSDTVRVVLKGINK 266

Query: 426 RNETLINTPAYA 437
           +N+ ++   A  
Sbjct: 267 KNDKVLAADARV 278



 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 61/152 (40%), Gaps = 11/152 (7%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNT--LFINIS 306
           P+ +        +PR S +GKR    +  K+  + ++   +  N  + +T      I   
Sbjct: 37  PREVLFGNPERTSPRLSPDGKRLAWLAPDKNNVLQVWVKTIGQNDDKVVTADKKRGI-RF 95

Query: 307 ASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYF----DPVWSPQGDL 360
            +++ ++  ++++ D +G     LY +    +  +  +  K         DP + P G L
Sbjct: 96  FTWAYNNRTLIYQQDLDGDENFHLYGVDLPTAQVRDFTPFKGVRAGIAAIDPAY-PDGVL 154

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           ++  K + + F I  +     + +L  E+   
Sbjct: 155 VSLNKRNPQLFDIYRLDLKTGELKLDTENPGD 186


>gi|224538257|ref|ZP_03678796.1| hypothetical protein BACCELL_03148 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224520117|gb|EEF89222.1| hypothetical protein BACCELL_03148 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 736

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 61/175 (34%), Gaps = 40/175 (22%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             ++   ++     + V          P +  +  S      FS +G + LI+ ++    
Sbjct: 60  GTQIIKYSFKTGKQVEVLFDAATARECPFKTFDSYS------FSPDGSKLLIATEQTPIY 113

Query: 283 D--------IYSV--DLQS---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
                    IYS+  ++     N  E+L++      +  +SPD + + F  D        
Sbjct: 114 RRSYTAIHYIYSLKRNVNGEINNIVEKLSDG-GPQQAPVFSPDGTMVAFVRD---NNIYL 169

Query: 330 VMQSNGSDQKRISQDKEASY---FDPVW--------------SPQGDLIAFTKFS 367
           V    G+ + ++++D + +      P W              S    ++A+ +F 
Sbjct: 170 VKFLYGNSESQVTEDGKRNAVLNGIPDWVYEEEFSFNRALEFSADSKMLAYIRFD 224



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 61/470 (12%), Positives = 143/470 (30%), Gaps = 120/470 (25%)

Query: 46  SPVSIAF-------TKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP 98
             +SIA          F    +    + ++V      S  F     ++    I  P    
Sbjct: 2   KQISIAILLCLCTLAGFAQGGQ-PLDLKDIV------SGKFR---AENIYGVIPIPGDGE 51

Query: 99  RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK---KFFSSPASWRKIA 155
            +   N+ G Q++   +   +   ++ V   L+D    ++   K    +  SP   + + 
Sbjct: 52  HYSQMNAEGTQII---KYSFKTGKQVEV---LFDAATARECPFKTFDSYSFSPDGSKLLI 105

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
            T    IY      +       ++  +  V+G I N +  +  DG   +           
Sbjct: 106 ATEQTPIY-----RRSYTAIHYIYSLKRNVNGEINNIVEKL-SDGGPQQ----------- 148

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR------------------ 257
            P FSP+   VA+   ++     +YL+      +  ++                      
Sbjct: 149 APVFSPDGTMVAFVRDNN-----IYLVKFLYGNSESQVTEDGKRNAVLNGIPDWVYEEEF 203

Query: 258 SMILAPRFSSNGKRALI---------------------------------------SVQK 278
           S   A  FS++ K                                           + + 
Sbjct: 204 SFNRALEFSADSKMLAYIRFDETEVPSYSFPVFAGSNPHITAFEKYPGDYTYKYPKTGEA 263

Query: 279 DEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQL--YVMQS 333
           +  + +++ D++S  T ++    +         ++ D +++   +    + +L  Y    
Sbjct: 264 NSKVSVHTFDIKSKITRKMQVPLDADGYIPRIRFTQDPNKLAIITLNRHQNRLDMYFGDP 323

Query: 334 NGSDQKRISQD------KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
             +  K++ +D      KE  + + ++ P+    +F         +      G+  + + 
Sbjct: 324 RSTVCKQVLRDESDAYIKEGVFDNIIFYPEN--FSFVSEKSGYNHLYWYSMGGNLIKQVT 381

Query: 388 EDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
             +    +   W     S  +   ++      +Y ID  G+   L + P 
Sbjct: 382 SGNYEVKEFLGWDADDNSFYYISNEESPLRQAVYQIDRKGKKTKLSSQPG 431



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 30/145 (20%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDP-------VWSPQGDLI--------AFTKFSGE 369
             Q+         Q  +  D   +   P        +SP G  +         + +    
Sbjct: 60  GTQIIKYSFKTGKQVEVLFDAATARECPFKTFDSYSFSPDGSKLLIATEQTPIYRRSYTA 119

Query: 370 KFAIGVMKKDGSQE-----RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY----- 419
              I  +K++ + E       L +    QAP +SP G  + F R  +      LY     
Sbjct: 120 IHYIYSLKRNVNGEINNIVEKLSDGGPQQAPVFSPDGTMVAFVRDNNIYLVKFLYGNSES 179

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+   ++N       P WV 
Sbjct: 180 QVTEDGKRNAVLN-----GIPDWVY 199


>gi|299115148|emb|CBN75515.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 318

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 49/241 (20%), Positives = 92/241 (38%), Gaps = 17/241 (7%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
            +  SL V D    N      + D       +SP+   +A  +   E      ++     
Sbjct: 84  SVDKSLKVWDVRSTNRAVQEHTSDGENLNVNYSPDGHYIAMGSSKKERNTETDILGIYDM 143

Query: 248 RAPKRIGNFRSMILAPR--FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           R  K++ + +  ILA    +S NG+   I+  +  ++D+ +    +    R+ +T   + 
Sbjct: 144 RTKKKLKSVKFTILAHDYKWSPNGEYL-INATETGSIDVMAF-GSTKPLSRVRSTKLAHT 201

Query: 306 SA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +     +  P +  +    D +G   L+ +  +    + I+ + E       ++P G  I
Sbjct: 202 APCKALAIDPFNRYLASGGD-DGLVSLWELD-DFVCVRTIACEGE--VRSLSFTPDGRFI 257

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSRKKDGDTGSKLY 419
           A    SG    I  ++   S   L    +  QA  + P    L  I SR   GD G +L+
Sbjct: 258 A-ISMSGVGVEIAEVETAASAHSLP--GAKSQAVEFHPKRPLLAGIASRPSRGDFGLRLW 314

Query: 420 S 420
           S
Sbjct: 315 S 315


>gi|227538064|ref|ZP_03968113.1| peptidase S9B, dipeptidylpeptidase IV domain protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242140|gb|EEI92155.1| peptidase S9B, dipeptidylpeptidase IV domain protein
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 707

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 45/323 (13%), Positives = 98/323 (30%), Gaps = 65/323 (20%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G+  S  +         + +  + +   DG  +R LT S D     P  SP+   VA+  
Sbjct: 72  GERKSYTVPTKSGTTVEVKEKDVQIRFADGT-VRKLTNSPDVEEQNPTLSPDGNYVAFTR 130

Query: 231 ----------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
                           Y  +    +Y   +      + +G   +   A  +S + K+   
Sbjct: 131 ASNLFAVQVSSGKEIQYTTDGTDVIYNGYSSWVYYEEILGRSTNYK-AFWWSPDSKKLAF 189

Query: 275 SVQKDEAMDIYSVDLQSNATERL--TNTL-FINISA-----SYSPDSSQI---------- 316
               D  + ++ + +       L  T      + +        + D   +          
Sbjct: 190 MRFDDTEVPMFPIYVSKGQHGYLEKTRYPKAGDKNPLVKVGVVNTDGGAVVWADFNEQDD 249

Query: 317 --------VFES--------DREGKE-QLYVMQSNGSDQKRISQDKEASYFD-------P 352
                    F S        +RE    + Y +      +K I  +K++S+ +        
Sbjct: 250 QYFGQPYWAFNSENIMVQWMNREQNNLKFYQVNPQTGAKKEIYDEKQSSWINLDHDERIT 309

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP-SGR-SLIFS-RK 409
             S     I  +  +G      +   DG     +    + Q  + +    +  +++   +
Sbjct: 310 YLSDNKHYILKSDKTGWA-HYYLYTLDGKLINAIT-SGDWQVTSIAHIDEKAKVLYVNAR 367

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
           K+      LY +D +G+N   + 
Sbjct: 368 KENSATVDLYRVDFSGKNFKRLT 390



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 58/407 (14%), Positives = 134/407 (32%), Gaps = 79/407 (19%)

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ----IIGKK 143
            ++ +    I  F  W   G   L       EG  R +  F++ DV   ++    +  K 
Sbjct: 33  GRQPSVTKPITSFSGWAD-GTHYL-------EGNPRDKQMFQV-DVSTGERKSYTVPTKS 83

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNS-RILFVSESVVSGIIKNSLC-VMDRDGA 201
             +     + +    +D   + +T           L    + V+    ++L  V    G 
Sbjct: 84  GTTVEVKEKDVQIRFADGTVRKLTNSPDVEEQNPTLSPDGNYVAFTRASNLFAVQVSSGK 143

Query: 202 NIRYLTPSRDQILF-------------------EPRFSPNQQKVAYATYDDE--DILRVY 240
            I+Y T   D I                        +SP+ +K+A+  +DD    +  +Y
Sbjct: 144 EIQYTTDGTDVIYNGYSSWVYYEEILGRSTNYKAFWWSPDSKKLAFMRFDDTEVPMFPIY 203

Query: 241 LMDTRIDRAPK-----------------RIGNFRSMILA------------PRFSSNGKR 271
           +   +     K                    +  +++ A            P ++ N + 
Sbjct: 204 VSKGQHGYLEKTRYPKAGDKNPLVKVGVVNTDGGAVVWADFNEQDDQYFGQPYWAFNSEN 263

Query: 272 ALISV--QKDEAMDIYSVDLQSNATERLTN---TLFINISA----SYSPDSSQIVFESDR 322
            ++    ++   +  Y V+ Q+ A + + +   + +IN+      +Y  D+   + +SD+
Sbjct: 264 IMVQWMNREQNNLKFYQVNPQTGAKKEIYDEKQSSWINLDHDERITYLSDNKHYILKSDK 323

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKD 379
            G    Y+   +G     I+   +          +   + +     E      +  +   
Sbjct: 324 TGWAHYYLYTLDGKLINAITS-GDWQVTSIAHIDEKAKVLYVNARKENSATVDLYRVDFS 382

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           G   + L   +     + SP  +  I +   + +T +K+  +  +G+
Sbjct: 383 GKNFKRLTFGNYTHNVSVSPDAKYFI-TNYSNINTPNKVALLRTDGK 428


>gi|134076561|emb|CAK39752.1| unnamed protein product [Aspergillus niger]
          Length = 769

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 79/246 (32%), Gaps = 27/246 (10%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    ++   + +   +  L       + +   S + +  A A+    D L V +++   
Sbjct: 2   GAEDGTVWQYEIESGRMEKLLVRCALPVRDIAVSKDGEWAAVAS----DELTVKVVNIED 57

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--------SNATERLT 298
               K +           F  +G+   +S   D  + IYS+                RL 
Sbjct: 58  MTKVKYLREQAKGTKHVTFDPSGRYVTVSCT-DGMLYIYSMLSDEPELVRKVDGVIRRLE 116

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                     + PD +   F S    ++           +K  S           WSP G
Sbjct: 117 PEDEATSQIVWHPDGT--AFASAEATRDIAIFSVGEWKKEKVFSGGHNGEVTAISWSPNG 174

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            L+A     G+     V+  +   +++L   + +N+    W PS  SL F+         
Sbjct: 175 ALLATAGKDGQ-----VLLWETKSQKVLERYDFANVINLAWHPSNNSLSFTTSDG----- 224

Query: 417 KLYSID 422
           +L+  D
Sbjct: 225 ELFIYD 230


>gi|157128213|ref|XP_001655094.1| intraflagellar transport 80, putative [Aedes aegypti]
 gi|108872662|gb|EAT36887.1| intraflagellar transport 80, putative [Aedes aegypti]
          Length = 742

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 69/215 (32%), Gaps = 28/215 (13%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLT 207
           A  R I    S  + ++++       S   +   + + +      + +  R G  +R   
Sbjct: 99  ADGRFIILNKSARVERNVSAHNATIVSGRWYPDGAGLLTAGEDGIIKIWSRSGM-LRSTV 157

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              +  +   R++PN   + Y          V +     +    +      ++L   +S+
Sbjct: 158 VQHEGQIRCARWAPNATAIVYC-----QGPFVAIKPLAANSKLTKWRAHDGLVLCIAWSN 212

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           N      S  +D    I+  D Q       +T+   I  S  +SPD   + +        
Sbjct: 213 NTNMIA-SGGEDCRYKIW--DTQGANIYTSVTDDYAI-TSLDFSPDGELLAWS------- 261

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                        R +Q+   S F+  WS  G  I
Sbjct: 262 ---------HSINRFNQETVGSMFNIAWSADGTQI 287



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 65/170 (38%), Gaps = 13/170 (7%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
           +++  +  R  + +    + I++ R+  +G   L +  +D  + I+S   +S      + 
Sbjct: 103 FIILNKSARVERNVSAHNATIVSGRWYPDGAGLL-TAGEDGIIKIWS---RSGMLRSTVV 158

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   A ++P+++ IV+         + +     + +    +  +       WS   
Sbjct: 159 QHEGQIRCARWAPNATAIVYC----QGPFVAIKPLAANSKLTKWRAHDGLVLCIAWSNNT 214

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFS 407
           ++IA     GE     +    G+     + +D  + +  +SP G  L +S
Sbjct: 215 NMIA---SGGEDCRYKIWDTQGANIYTSVTDDYAITSLDFSPDGELLAWS 261


>gi|296213046|ref|XP_002807191.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat and SOCS box-containing
           protein 2-like [Callithrix jacchus]
          Length = 404

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 66/177 (37%), Gaps = 7/177 (3%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +  AT  ++  ++++ + T        +   + ++    F+ +G   L+S  +D+
Sbjct: 119 PDVSCLVLATGLNDGQIKIWEVQT--GLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDK 176

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ ++      + L+  L      S SPD S +       G++ +++         R
Sbjct: 177 TLRIWDLNKHGKQIQVLSGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIR 233

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             +  ++S     +SP   L+    +      I      G + R L     +    W
Sbjct: 234 KLEGHQSSVVSCDFSPDSALLVTASYDTN--VIMWDPYTGERLRSLQHHPRVGPWPW 288



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 72/247 (29%), Gaps = 41/247 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 16  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKN 75

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKRA---------------LISVQKDEAM 282
           +T+   +PK            +  +P  S   ++                L +   D  +
Sbjct: 76  ETKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDVSCLVLATGLNDGQI 135

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 136 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 194

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 195 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 252

Query: 403 SLIFSRK 409
            L+ +  
Sbjct: 253 LLVTASY 259


>gi|293609417|ref|ZP_06691719.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827869|gb|EFF86232.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 411

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/280 (12%), Positives = 81/280 (28%), Gaps = 43/280 (15%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF------ 256
              S          S + + +    Y+ +D        L         +++ N       
Sbjct: 137 TVDSHGGHPTHATISLDGKFLFVSNYSAFDKGRGGVAVLPILPNGHLGEKVQNIVFEEGS 196

Query: 257 --------RSMILAPRFSSNGKRALISVQKDEAMDIYSVD--------LQSNATERLTNT 300
                        +  FS +GK    S   ++ +  +  +          +N     T+ 
Sbjct: 197 GHVKGRQESGHAHSTTFSPDGKYLYASDLGNDKVYTFHYNPNKAQPLEADTNRDVTFTHG 256

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------QDKEASYFD 351
                   +SP+       ++   + ++          K+++           +  S   
Sbjct: 257 SGP-RHMVFSPNGKHAYVTAEM--RSEIVTFNVQDGHLKKVAELKLIHEDKTPEFKSASG 313

Query: 352 PVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFS 407
            + SP G   IA  + +  K  +  ++++G   + +   +N   P   ++  SG+ L  +
Sbjct: 314 IILSPNGKYVIAANRGADNKLLVFKIQQNGLLAKPVAYKANGIEPRAFSFDASGKYLYVT 373

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
                     L+  D            A  S P  + F +
Sbjct: 374 NVYSN--NISLFRFDAKNGTLKPAGDAAKISTPTDIKFFN 411



 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 70/202 (34%), Gaps = 38/202 (18%)

Query: 262 APRF---SSNGKRALISVQKDEAMDIYSVDLQSNATERL-T--NTLFINISASYSPDSS- 314
           +P +   S +G R   +  ++    + ++ +Q+   E L T  +       A+ S D   
Sbjct: 98  SPSWIVKSKDG-RFAYTTNEENEGAVTALSIQNGKVEVLNTVDSHGGHPTHATISLDGKF 156

Query: 315 -----QIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASY----------FDPVWSPQ 357
                   F+  R G   L ++ +   G   + I  ++ + +              +SP 
Sbjct: 157 LFVSNYSAFDKGRGGVAVLPILPNGHLGEKVQNIVFEEGSGHVKGRQESGHAHSTTFSPD 216

Query: 358 GDLIAFTKFSGEKFAIGVMKK--------DGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           G  +  +    +K                D +++      S  +   +SP+G+       
Sbjct: 217 GKYLYASDLGNDKVYTFHYNPNKAQPLEADTNRDVTFTHGSGPRHMVFSPNGKH----AY 272

Query: 410 KDGDTGSKLYSIDL-NGRNETL 430
              +  S++ + ++ +G  + +
Sbjct: 273 VTAEMRSEIVTFNVQDGHLKKV 294


>gi|258573669|ref|XP_002541016.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237901282|gb|EEP75683.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 694

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 67/183 (36%), Gaps = 18/183 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++  S   + +L ++  +G + R +   ++  + +  +SPN ++          ++  
Sbjct: 223 VDKTGKSYYGETTLYILSANGFDSR-INLDKEGPIHDVSWSPNSKEF--------GVIYG 273

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           Y+         + +    S  LAPR    FS +G+  +++   + A  +   DL  N  +
Sbjct: 274 YMPAKATIFNARGVATH-SFPLAPRNTMVFSPHGRFVVVAGFGNLAGQMDIYDLDKNYAK 332

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             T          +SPD   I     S R   +    +   G     +  +     +D  
Sbjct: 333 VTTVEASNASVCEWSPDGKHILTATTSPRLRVDNGVRIWHVGGGL--MYNEDMNELYDVC 390

Query: 354 WSP 356
           W P
Sbjct: 391 WRP 393



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 71/212 (33%), Gaps = 24/212 (11%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKD------ 279
            +          V + +     AP  +   F+   +  +++++G   ++  Q +      
Sbjct: 169 VFIPERKGQPAAVKVFNVPQFNAPISQKTFFKGDKVQMKWNNSGTTLIVLAQTEVDKTGK 228

Query: 280 ---EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSNG 335
                  +Y +      +    +        S+SP+S +  V       K  ++      
Sbjct: 229 SYYGETTLYILSANGFDSRINLDKEGPIHDVSWSPNSKEFGVIYGYMPAKATIF------ 282

Query: 336 SDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNL 392
            + + ++      A     V+SP G  +    F      + +   D +  ++   E SN 
Sbjct: 283 -NARGVATHSFPLAPRNTMVFSPHGRFVVVAGFGNLAGQMDIYDLDKNYAKVTTVEASNA 341

Query: 393 QAPTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
               WSP G+ ++ +        D G +++ +
Sbjct: 342 SVCEWSPDGKHILTATTSPRLRVDNGVRIWHV 373



 Score = 36.5 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 14/126 (11%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G+  LY++ +NG D  RI+ DKE    D  WSP           G  +     K      
Sbjct: 232 GETTLYILSANGFDS-RINLDKEGPIHDVSWSPNSKEF------GVIYGYMPAKATIFNA 284

Query: 384 RLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTPAYAS 438
           R +   S   AP     +SP GR ++ +   +      +Y +D N    T +  + A   
Sbjct: 285 RGVATHSFPLAPRNTMVFSPHGRFVVVAGFGNLAGQMDIYDLDKNYAKVTTVEASNASVC 344

Query: 439 DPQWVG 444
           +  W  
Sbjct: 345 E--WSP 348


>gi|228963260|ref|ZP_04124428.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228796434|gb|EEM43874.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 693

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++       Q  +  + +     P+WSP   
Sbjct: 61  STNISDDGKNVAFVKKTANWKDNTYRNHVWIYGKEKG-QSCLLINGDIESTCPLWSPNSR 119

Query: 360 LIAFTKFSG-EKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKK 410
            IA+    G  K  I V   DG +   + ++   +    W P+G+ L +  + 
Sbjct: 120 DIAYLSPVGNGKNQIFVKSLDGYEGVQITDEKEGVSTFKWGPTGKGLYYVTQS 172



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 81/262 (30%), Gaps = 42/262 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           L  + D     P +SPN + +AY +       ++++          +I + +  +   ++
Sbjct: 101 LLINGDIESTCPLWSPNSRDIAYLSPVGNGKNQIFVKSLD-GYEGVQITDEKEGVSTFKW 159

Query: 266 SSNGKRALISVQKDEAMDI-YSVDLQS-----NATERLTNTLFINISASYSPDSSQIVFE 319
              GK      Q  E ++I    DL           +     +I I           V +
Sbjct: 160 GPTGKGLYYVTQSKECVEIKKRRDLYGEFQHIGKEHQNNCLYYIEIE---------KVIQ 210

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------AI 373
           SD          +       +++  K+    +   S  G  I F               +
Sbjct: 211 SD--------TYEHEKRVVYQLTDGKDFHIHEFDISNDGKKIVFMATPSSNMADYINGDL 262

Query: 374 GVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS---------RKKDGDTGSKLYSIDL 423
            ++     + + L V+     +  +SP G  + ++         R    D+  ++Y I+ 
Sbjct: 263 YILHTKAGELQKLNVDKLLGGSVCFSPEGSKICYTASIREKDYYRNHIQDSTLEVYDIN- 321

Query: 424 NGRNETLINTPAYASDP-QWVG 444
            G     +        P QW  
Sbjct: 322 TGEVIQPVTDFDSTVMPLQWTA 343



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 43/106 (40%), Gaps = 11/106 (10%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVEDSNLQA--PTWSP 399
           +      S  G  +AF K +        +  + +  K+  Q  LL+   ++++  P WSP
Sbjct: 58  TLSSTNISDDGKNVAFVKKTANWKDNTYRNHVWIYGKEKGQSCLLIN-GDIESTCPLWSP 116

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQWVG 444
           + R + +     G+  ++++   L+G     + +     S  +W  
Sbjct: 117 NSRDIAYLSPV-GNGKNQIFVKSLDGYEGVQITDEKEGVSTFKWGP 161


>gi|218895293|ref|YP_002443704.1| prolyl oligopeptidase family protein [Bacillus cereus G9842]
 gi|218544179|gb|ACK96573.1| prolyl oligopeptidase family protein [Bacillus cereus G9842]
          Length = 654

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++       Q  +  + +     P+WSP   
Sbjct: 22  STNISDDGKNVAFVKKTANWKDNTYRNHVWIYGKEKG-QSCLLINGDIESTCPLWSPNSR 80

Query: 360 LIAFTKFSG-EKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKK 410
            IA+    G  K  I V   DG +   + ++   +    W P+G+ L +  + 
Sbjct: 81  DIAYLSPVGNGKNQIFVKSLDGYEGVQITDEKEGVSTFKWGPTGKGLYYVTQS 133



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 81/262 (30%), Gaps = 42/262 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           L  + D     P +SPN + +AY +       ++++          +I + +  +   ++
Sbjct: 62  LLINGDIESTCPLWSPNSRDIAYLSPVGNGKNQIFVKSLD-GYEGVQITDEKEGVSTFKW 120

Query: 266 SSNGKRALISVQKDEAMDI-YSVDLQS-----NATERLTNTLFINISASYSPDSSQIVFE 319
              GK      Q  E ++I    DL           +     +I I           V +
Sbjct: 121 GPTGKGLYYVTQSKECVEIKKRRDLYGEFQHIGKEHQNNCLYYIEIE---------KVIQ 171

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------AI 373
           SD          +       +++  K+    +   S  G  I F               +
Sbjct: 172 SD--------TYEHEKRVVYQLTDGKDFHIHEFDISNDGKKIVFMATPSSNMADYINGDL 223

Query: 374 GVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS---------RKKDGDTGSKLYSIDL 423
            ++     + + L V+     +  +SP G  + ++         R    D+  ++Y I+ 
Sbjct: 224 YILHTKAGELQKLNVDKLLGGSVCFSPEGSKICYTASIREKDYYRNHIQDSTLEVYDIN- 282

Query: 424 NGRNETLINTPAYASDP-QWVG 444
            G     +        P QW  
Sbjct: 283 TGEVIQPVTDFDSTVMPLQWTA 304



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 43/106 (40%), Gaps = 11/106 (10%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVEDSNLQA--PTWSP 399
           +      S  G  +AF K +        +  + +  K+  Q  LL+   ++++  P WSP
Sbjct: 19  TLSSTNISDDGKNVAFVKKTANWKDNTYRNHVWIYGKEKGQSCLLIN-GDIESTCPLWSP 77

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQWVG 444
           + R + +     G+  ++++   L+G     + +     S  +W  
Sbjct: 78  NSRDIAYLSPV-GNGKNQIFVKSLDGYEGVQITDEKEGVSTFKWGP 122


>gi|161524131|ref|YP_001579143.1| 6-phosphogluconolactonase [Burkholderia multivorans ATCC 17616]
 gi|189351112|ref|YP_001946740.1| putative 3-carboxymuconate cyclase [Burkholderia multivorans ATCC
           17616]
 gi|160341560|gb|ABX14646.1| 6-phosphogluconolactonase [Burkholderia multivorans ATCC 17616]
 gi|189335134|dbj|BAG44204.1| putative 3-carboxymuconate cyclase [Burkholderia multivorans ATCC
           17616]
          Length = 414

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/326 (14%), Positives = 97/326 (29%), Gaps = 30/326 (9%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ-IIGKKFFSSPASWRKIAHTISDDIYQS 165
           G   L+ G     G D + V +R +D        +      +P+                
Sbjct: 50  GVYNLLVGTYTDTGSDGIYV-YR-FDTSTGSVAPVSSAKTVNPSYLLPSRDGRVVYAVNE 107

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQ-----ILFEPRF 219
           + G+ G    R    +    +     + +  +  +G +  YL+ S D        +    
Sbjct: 108 LPGDNGPATQRGGISAFRFDAKTGALTFIDRVSSEGNDPCYLSLSPDGKYLVTANYSVAA 167

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            P      +   DD  +    L      + P R     + + +  FS +G+   +     
Sbjct: 168 DPGGSFALFPVRDDGGVAPAVLSVHHEGKGPVRGRQDNAHVHSTVFSPDGRYLFVQDLGL 227

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISA-------SYSPDSSQIVFESDREGKEQLY-- 329
           + +  Y   +         T+T +  + A        +S D       S+     +++  
Sbjct: 228 DKIYGYRYTVDGSRGLISPTDTRYTPVKAGAGPRHLVFSADGRFAYVTSELNASVEVFGY 287

Query: 330 ----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI---GVMKKDGSQ 382
               +               +        SP G  + +    G+   I    V + DG  
Sbjct: 288 HDGKLTPIETVSMIAPGFKGKVGGGAIHLSPDGRFL-YVSNRGDANEIVIYAVNQADGRL 346

Query: 383 ERLLVEDSNLQAPT---WSPSGRSLI 405
           + +  + S  + P      P+G+ LI
Sbjct: 347 KTVGRQSSLGRTPREFLIDPTGKWLI 372



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 67/207 (32%), Gaps = 29/207 (14%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDL--QSNATERLTNTLFINISASYSPDSSQ 315
           +   +      G  AL  V+ D  +    + +  +     R         S  +SPD   
Sbjct: 160 TANYSVAADPGGSFALFPVRDDGGVAPAVLSVHHEGKGPVRGRQDNAHVHSTVFSPDGRY 219

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---------VWSPQGDLIAFTKF 366
           + F  D  G +++Y  +      + +    +  Y            V+S  G     T  
Sbjct: 220 L-FVQD-LGLDKIYGYRYTVDGSRGLISPTDTRYTPVKAGAGPRHLVFSADGRFAYVTSE 277

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-----------SPSGRSLIFSRKKDGDTG 415
                 +     DG    +  E  ++ AP +           SP GR L +   +     
Sbjct: 278 LNASVEVFGYH-DGKLTPI--ETVSMIAPGFKGKVGGGAIHLSPDGRFL-YVSNRGDANE 333

Query: 416 SKLYSID-LNGRNETLINTPAYASDPQ 441
             +Y+++  +GR +T+    +    P+
Sbjct: 334 IVIYAVNQADGRLKTVGRQSSLGRTPR 360


>gi|22331145|ref|NP_188434.2| transducin family protein / WD-40 repeat family protein
           [Arabidopsis thaliana]
 gi|9294061|dbj|BAB02018.1| WD40-repeat protein [Arabidopsis thaliana]
 gi|17064720|gb|AAL32514.1| WD40-repeat protein [Arabidopsis thaliana]
 gi|21387079|gb|AAM47943.1| WD40-repeat protein [Arabidopsis thaliana]
 gi|332642520|gb|AEE76041.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
          Length = 609

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 86/240 (35%), Gaps = 16/240 (6%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS-------RDQILFEPRFSPNQQK 225
           F+  +  VS   V     + +     DG   +++          R Q      F+ ++++
Sbjct: 320 FSGHMKNVSSLAVLKGNADYILSGSYDGLICKWMLGRGFCGKLQRTQNSQIKCFAAHEEE 379

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +  + YD++     Y  D   +     IGN    +     S +    L+   +       
Sbjct: 380 IVTSGYDNKISRISYKDDQCTNEESIDIGNQPKDLSLAPLSPD---LLLVTFESG----- 431

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            V L+        N  FI  + + +PD ++ V    ++GK  LY +  +   ++ + +  
Sbjct: 432 VVFLRDGKVVSTINLGFIVTALAVTPDGTEAV-IGGQDGKLHLYSINGDSLTEEAVLERH 490

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +     +SP   + A    + E      + ++   + +L   + +    WSP+   + 
Sbjct: 491 RGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVA 550



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 6/99 (6%)

Query: 198 RDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIG 254
            +G   ++   SR+   F    RF+P+  K    + D + I  +Y   T  I        
Sbjct: 172 YEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGI--IYDGKTCEILGELSSDD 229

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
             +  I A  +S +GK+ L +V  D++  I+ +    + 
Sbjct: 230 GHKGSIYAVSWSPDGKQVL-TVSADKSAKIWDISDNGSG 267


>gi|75758459|ref|ZP_00738581.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228898913|ref|ZP_04063194.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis IBL 4222]
 gi|74494086|gb|EAO57180.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228860729|gb|EEN05108.1| Acylamino-acid-releasing enzyme [Bacillus thuringiensis IBL 4222]
          Length = 693

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 9/113 (7%)

Query: 306 SASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           S + S D   + F        D   +  +++       Q  +  + +     P+WSP   
Sbjct: 61  STNISDDGKNVAFVKKTANWKDNTYRNHVWIYGKEKG-QSCLLINGDIESTCPLWSPNSR 119

Query: 360 LIAFTKFSG-EKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKK 410
            IA+    G  K  I V   DG +   + ++   +    W P+G+ L +  + 
Sbjct: 120 DIAYLSPVGNGKNQIFVKSLDGYEGVQITDEKEGVSTFKWGPTGKGLYYVTQS 172



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 81/262 (30%), Gaps = 42/262 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           L  + D     P +SPN + +AY +       ++++          +I + +  +   ++
Sbjct: 101 LLINGDIESTCPLWSPNSRDIAYLSPVGNGKNQIFVKSLD-GYEGVQITDEKEGVSTFKW 159

Query: 266 SSNGKRALISVQKDEAMDI-YSVDLQS-----NATERLTNTLFINISASYSPDSSQIVFE 319
              GK      Q  E ++I    DL           +     +I I           V +
Sbjct: 160 GPTGKGLYYVTQSKECVEIKKRRDLYGEFQHIGKEHQNNCLYYIEIE---------KVIQ 210

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------AI 373
           SD          +       +++  K+    +   S  G  I F               +
Sbjct: 211 SD--------TYEHEKRVVYQLTDGKDFHIHEFDISNDGKKIVFMATPSSNMADYINGDL 262

Query: 374 GVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFS---------RKKDGDTGSKLYSIDL 423
            ++     + + L V+     +  +SP G  + ++         R    D+  ++Y I+ 
Sbjct: 263 YILHTKAGELQKLNVDKLLGGSVCFSPEGSKICYTASIREKDYYRNHIQDSTLEVYDIN- 321

Query: 424 NGRNETLINTPAYASDP-QWVG 444
            G     +        P QW  
Sbjct: 322 TGEVIQPVTDFDSTVMPLQWTA 343



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 43/106 (40%), Gaps = 11/106 (10%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVEDSNLQA--PTWSP 399
           +      S  G  +AF K +        +  + +  K+  Q  LL+   ++++  P WSP
Sbjct: 58  TLSSTNISDDGKNVAFVKKTANWKDNTYRNHVWIYGKEKGQSCLLIN-GDIESTCPLWSP 116

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQWVG 444
           + R + +     G+  ++++   L+G     + +     S  +W  
Sbjct: 117 NSRDIAYLSPV-GNGKNQIFVKSLDGYEGVQITDEKEGVSTFKWGP 161


>gi|297461870|ref|XP_596937.4| PREDICTED: CG3436-like [Bos taurus]
 gi|297485445|ref|XP_002695046.1| PREDICTED: CG3436-like [Bos taurus]
 gi|296477729|gb|DAA19844.1| CG3436-like [Bos taurus]
          Length = 487

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/285 (13%), Positives = 103/285 (36%), Gaps = 30/285 (10%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKV 226
            E    +         V+SG    ++ + D  DG+ +R   P  +  + E   + + +++
Sbjct: 117 HEHIVSSCNFCVDDTKVLSGSYDCTVKLWDAMDGSIVRDFEPVPEGPVLECSITADSRRI 176

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             A+YD      V   D    +   ++ +  + I++ + S +GK  ++ +  D    I+ 
Sbjct: 177 VAASYDK----TVRAWDVETGKLLWKL-SHETFIVSAKCSPDGKYVVLGLDVDHG--IFI 229

Query: 287 VDL-QSNATERLTNTLFIN-ISASYSPDSSQIVFES-DREGKEQLYVMQSNG-SDQKRIS 342
           +D   S    R+ +   ++  +  + PDS ++   S DR     + +      +    I+
Sbjct: 230 IDAKDSTTVSRIKDHHMMSLTACCFDPDSQRVASVSFDRS----IKIWDVTSQTTLLTIT 285

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-----LLVEDSNLQAPT- 396
           +    +  +  ++  G  +  + +      + +      + R     + +   +    + 
Sbjct: 286 KAHNNAISNCCFTFSGHFLCTSSWDKT---LKIWNVHTGEFRNRGACVTLMQGHEGCVSS 342

Query: 397 --WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
             ++     L+       D    ++ ++   R  +L     +  D
Sbjct: 343 CRFARDTSFLV---SGGFDKTVAIWDVEEGYRKLSLKGHNDWVMD 384


>gi|254720157|ref|ZP_05181968.1| WD repeat-containing protein [Brucella sp. 83/13]
 gi|265985164|ref|ZP_06097899.1| WD-repeat family protein [Brucella sp. 83/13]
 gi|306839536|ref|ZP_07472343.1| WD repeat-containing protein [Brucella sp. NF 2653]
 gi|264663756|gb|EEZ34017.1| WD-repeat family protein [Brucella sp. 83/13]
 gi|306405368|gb|EFM61640.1| WD repeat-containing protein [Brucella sp. NF 2653]
          Length = 324

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 46/312 (14%), Positives = 101/312 (32%), Gaps = 32/312 (10%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWD--VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
            +  G V +           + D  +     + GK   +     R +    +  +   + 
Sbjct: 26  AMADGAVHRLDDGHQTAT--VHDGLLSAAMAVDGKSLVTGGEDGR-VCRIDAKGVVTELA 82

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                + + +       V      +      DG    +    +++ +    F+P  Q++A
Sbjct: 83  NIPRKWITAVATGPNGTVGFASGKTGWSRAADGKVQEFT---QERSVEGIAFAPKGQRLA 139

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            A Y+        L+ T     P  +  ++   +   FS +G+  + S+Q++ A+  +  
Sbjct: 140 IARYNG-----ATLIWTGTAAKPVEL-EWKGAHIGITFSPDGRFLITSMQEN-ALHGWR- 191

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD------QKRI 341
            L+ N   R+T         S+S  +  +       G     V    G D         +
Sbjct: 192 -LEDNKHMRMTGYPAKVKDWSWSAKAKWLA----TSGAPAAIVWPFAGKDGPMGKAPLEL 246

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSP 399
               ++        P G+ IA   ++     I +++    +E LL       + +  W  
Sbjct: 247 GLRGDSMVTSVACHP-GEDIAAIGYNDG--MILIVRFADQKEVLLRRPGKGAITSMAWDE 303

Query: 400 SGRSLIFSRKKD 411
            G  L+F  +  
Sbjct: 304 DGYRLVFGSQAG 315



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 68/202 (33%), Gaps = 28/202 (13%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----F 302
               +       +L+   + +GK  +      E   +  +D +      L N        
Sbjct: 36  DDGHQTATVHDGLLSAAMAVDGKSLV---TGGEDGRVCRIDAK-GVVTELANIPRKWITA 91

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +    +       + F S + G  +     +     +  +Q  E S     ++P+G  +A
Sbjct: 92  VATGPN-----GTVGFASGKTGWSR-----AADGKVQEFTQ--ERSVEGIAFAPKGQRLA 139

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +++G      +     ++   L         T+SP GR LI S +++   G +L    
Sbjct: 140 IARYNGATL---IWTGTAAKPVELEWKGAHIGITFSPDGRFLITSMQENALHGWRL---- 192

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            + ++  +   PA   D  W  
Sbjct: 193 EDNKHMRMTGYPAKVKDWSWSA 214


>gi|195114434|ref|XP_002001772.1| GI17028 [Drosophila mojavensis]
 gi|193912347|gb|EDW11214.1| GI17028 [Drosophila mojavensis]
          Length = 347

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 90/295 (30%), Gaps = 28/295 (9%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG--ANIRYLTPSRDQILFEPRF 219
           I Q    E   F +      E ++S      L +    G   NI  ++      + E  F
Sbjct: 48  IMQLEGHEGEIFTTEFHPEGEMLLSSGFDRQLYIWQVYGDCENIMAMS-GHSGAVMEAHF 106

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P+   +   + D      + + D    +  +R+    + + + + S  G++ L S   D
Sbjct: 107 TPDGSHIFTCSTDK----TLAIWDIVTGQRVRRLKGHTNFVNSVQGSRRGQQLLCSGSDD 162

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             + I+  D +      +  + +   +  +   S Q++         +L +         
Sbjct: 163 RTIRIW--DARKKQPVHVLESPYQVTAVCFGDTSEQVI---SGGIDNELKIWDIRKQQVL 217

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQA--- 394
              +    +      SP+GD +           + +      G +   + +         
Sbjct: 218 HHLRGHTDTITAVALSPEGDFVLTNAMDNTLRVWDVRAYAP-GERCVKVFQGHQHNFEKN 276

Query: 395 ---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE--TLINTPAYASDPQWVG 444
                W+P G  +       G     +Y  D+N R     L       +D  +  
Sbjct: 277 LLRCAWAPGGDKI-----SAGSADRHVYVWDVNTRRILYKLPGHNGSVNDVDFSP 326


>gi|170099900|ref|XP_001881168.1| chromatin associated protein [Laccaria bicolor S238N-H82]
 gi|164643847|gb|EDR08098.1| chromatin associated protein [Laccaria bicolor S238N-H82]
          Length = 607

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 55/155 (35%), Gaps = 13/155 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           RFSP+ + +A    D     R+ + D    R        +  I +  FS +G R ++S  
Sbjct: 333 RFSPDGKLLATGAEDR----RIRIWDIAKKRIRHIFDGHQQEIYSLDFSRDG-RLIVSGS 387

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFESDREGKEQLYVMQ 332
            D+   I+ +   S     +T+   +N      S + SPD+S +   S       + +  
Sbjct: 388 GDKTTRIWDMYDNSCKILTITDADSLNNDAGVTSVTISPDASLVAAGSL---DSIVRIWD 444

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
                     +    S +   ++P G  +      
Sbjct: 445 VASGTLLERLRGHRDSVYSVAFTPDGKGLVSGSLD 479



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 71/213 (33%), Gaps = 18/213 (8%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-- 259
           N+ +       +    +FS + +   Y         +++   T          N      
Sbjct: 271 NLVHTFNHTSVVCCV-QFSADGR---YLATGCNRTAQIFDTKTGEKVCVLVDANVAEQGD 326

Query: 260 --ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQI 316
             I + RFS +GK    +  +D  + I+  D+       + +       S  +S D   I
Sbjct: 327 LYIRSVRFSPDGKLLA-TGAEDRRIRIW--DIAKKRIRHIFDGHQQEIYSLDFSRDGRLI 383

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQ----DKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           V  S  +   +++ M  N      I+     + +A       SP   L+A          
Sbjct: 384 VSGSG-DKTTRIWDMYDNSCKILTITDADSLNNDAGVTSVTISPDASLVAAGSLD-SIVR 441

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           I  +      ERL     ++ +  ++P G+ L+
Sbjct: 442 IWDVASGTLLERLRGHRDSVYSVAFTPDGKGLV 474



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 67/219 (30%), Gaps = 32/219 (14%)

Query: 112 VTGRVIKEGKDRLRVEF-----RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           V   V      R          +++D K  +++      +              D+Y   
Sbjct: 281 VVCCVQFSADGRYLATGCNRTAQIFDTKTGEKVCVLVDANVAEQG---------DLYIRS 331

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                D           + +G     + + D     IR++     Q ++   FS + + +
Sbjct: 332 VRFSPDGKL--------LATGAEDRRIRIWDIAKKRIRHIFDGHQQEIYSLDFSRDGRLI 383

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-----LAPRFSSNGKRALISVQKDEA 281
              + D     R++ M     +    I +  S+       +   S +    + +   D  
Sbjct: 384 VSGSGD--KTTRIWDMYDNSCKILT-ITDADSLNNDAGVTSVTISPD-ASLVAAGSLDSI 439

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           + I+ V       ERL        S +++PD   +V  S
Sbjct: 440 VRIWDV-ASGTLLERLRGHRDSVYSVAFTPDGKGLVSGS 477


>gi|300795213|ref|NP_001179935.1| WD repeat-containing protein 8 [Bos taurus]
 gi|297484170|ref|XP_002694166.1| PREDICTED: WD repeat domain 8 [Bos taurus]
 gi|296479078|gb|DAA21193.1| WD repeat domain 8 [Bos taurus]
          Length = 458

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 83/229 (36%), Gaps = 16/229 (6%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           I+  L V D +   I  L    DQI     +S +   +         +++V+ ++     
Sbjct: 27  IQYRLVVRDANTLQILQLYTCLDQIQHL-EWSADSLFIL-CALYKRGLVQVWSLEQPEWH 84

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              +I    + ++A  +S +G+  L + +    + ++S  L + +   +          +
Sbjct: 85  C--KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACQQGIT 140

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++ D   +     R+ ++ + +   +     R             W+P G ++A    S 
Sbjct: 141 FTRDGRYLALAERRDCRDYVSIFVCSDWQLLRHFDTDTQDLAGIEWAPNGCVLA-VWDSC 199

Query: 369 EKFAIGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKD 411
            ++ + +   DG   RLL           +++  WSPS + L       
Sbjct: 200 LEYKVLLYSLDG---RLLSAFCAYEWSLGIKSVAWSPSSQFLAIGSYDG 245



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 51/157 (32%), Gaps = 9/157 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +GK     +Q      +   D  +    +L   L       +S DS  I+    + G
Sbjct: 16  FSPDGKYLASCIQ----YRLVVRDANTLQILQLYTCLDQIQHLEWSADSLFILCALYKRG 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             Q++ ++    +      +  A      WSP G  I     +     I V         
Sbjct: 72  LVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSVS 127

Query: 385 LLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            +       Q  T++  GR L  + ++D      ++ 
Sbjct: 128 YIKYPKACQQGITFTRDGRYLALAERRDCRDYVSIFV 164


>gi|20808617|ref|NP_623788.1| hypothetical protein TTE2243 [Thermoanaerobacter tengcongensis MB4]
 gi|254479139|ref|ZP_05092489.1| hypothetical protein CDSM653_954 [Carboxydibrachium pacificum DSM
           12653]
 gi|20517248|gb|AAM25392.1| hypothetical protein TTE2243 [Thermoanaerobacter tengcongensis MB4]
 gi|214034910|gb|EEB75634.1| hypothetical protein CDSM653_954 [Carboxydibrachium pacificum DSM
           12653]
          Length = 453

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 66/181 (36%), Gaps = 14/181 (7%)

Query: 263 PRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIV 317
           P FS +G + +    +D        ++  DL       L       +  A    D+S I+
Sbjct: 230 PVFSPDGTKVVYMTNRDCIGSGGSSLWLYDLTVCQERPLVKNMRGEHYRAVGWLDNSHIL 289

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +      K+  Y +       ++++ + +  Y   ++ P    I +T        I + K
Sbjct: 290 YTVYYTNKKNEYYISDISGRYEKLNLEGKQPYVLGIY-PN-LQILYTSDYSASRDICLAK 347

Query: 378 KDGSQ------ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSIDLNGRNETL 430
            D          +  ++     + + SP+G  L F    D +   + L  ++L  + ETL
Sbjct: 348 VDLVTKAVKEVYKKTLDGVLRNSCSLSPNGSRLAFMYAPDSNDTLQYLTVVNLVNKKETL 407

Query: 431 I 431
           I
Sbjct: 408 I 408



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 53/129 (41%), Gaps = 6/129 (4%)

Query: 300 TLFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPV-W 354
           TL+   +  +SPD +++V+ ++R+    G   L++       ++ + ++    ++  V W
Sbjct: 223 TLWWADNPVFSPDGTKVVYMTNRDCIGSGGSSLWLYDLTVCQERPLVKNMRGEHYRAVGW 282

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
                ++    ++ +K    +    G  E+L +E          P+   ++++       
Sbjct: 283 LDNSHILYTVYYTNKKNEYYISDISGRYEKLNLEGKQPYVLGIYPN-LQILYTSDYSASR 341

Query: 415 GSKLYSIDL 423
              L  +DL
Sbjct: 342 DICLAKVDL 350



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 2/34 (5%)

Query: 393 QAPTWSPSGRSLIFSRKKD--GDTGSKLYSIDLN 424
             P +SP G  +++   +D  G  GS L+  DL 
Sbjct: 228 DNPVFSPDGTKVVYMTNRDCIGSGGSSLWLYDLT 261


>gi|313148077|ref|ZP_07810270.1| dipeptidyl peptidase IV [Bacteroides fragilis 3_1_12]
 gi|313136844|gb|EFR54204.1| dipeptidyl peptidase IV [Bacteroides fragilis 3_1_12]
          Length = 719

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 83/236 (35%), Gaps = 48/236 (20%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDT---------------RIDRAPKRIGNFRS----- 258
           +SP+   +A+   D+  + +  L+D                 +     ++G +       
Sbjct: 200 WSPSGNLLAFYRMDESMVAQYPLVDITAPIAEVNNIRYPMAGMTSHQVKVGIYNPATGKS 259

Query: 259 ---MILAP--------RFSSNGKRA-LISVQKDEA-MDIYSVDLQSNATERLTNTLFIN- 304
                  P         ++ + K   LI + +D+    +   + ++            + 
Sbjct: 260 IYLNAGDPTDRYFTNISWAPDEKSLYLIELNRDQNHAKLCQYNAETGDLMATLFEEENDK 319

Query: 305 -ISAS----YSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +       + P DSS+ +++S ++G   LY+  ++G   +++++ +       V     
Sbjct: 320 YVEPQEPIIFLPWDSSKFIYQSQKDGFSHLYLYDTSGKQLRQLTEGE--WLVKEVLGFDA 377

Query: 359 DL----IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSR 408
                 IA T+FS  +  +  +         L     + +   SPSGR LI  +S 
Sbjct: 378 KKKEIIIASTEFSPLQSNLFRVDIKTGARTPLGSGEGVHSGKLSPSGRYLIDQYSS 433



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 58/189 (30%), Gaps = 24/189 (12%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKE 326
           +  + +   QKD    +Y  D       +LT   ++      +     +I+  S      
Sbjct: 333 DSSKFIYQSQKDGFSHLYLYDTSGKQLRQLTEGEWLVKEVLGFDAKKKEIIIASTEFSPL 392

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTKFSGEKFAIGVMKK-DGSQE 383
           Q  + + +     R              SP G  +   ++  S  + +I ++    G   
Sbjct: 393 QSNLFRVDIKTGARTPLGSGEGVHSGKLSPSGRYLIDQYSSPSVPR-SINILDVQSGKSV 451

Query: 384 RLLVED---SNLQAPTW------SPSGRSLIFSR-------KKDGDTGSKLYSIDLNGRN 427
            LL      +  + P+       +  G++ ++ R         +    + +Y     G  
Sbjct: 452 NLLTAADPFAGYKMPSIETGTIKAADGKTDLYYRLVKPADFDPNKKYPAIIYVY---GGP 508

Query: 428 ETLINTPAY 436
              + T  +
Sbjct: 509 HAQMVTNGW 517


>gi|299755360|ref|XP_001828615.2| pre-mRNA splicing factor [Coprinopsis cinerea okayama7#130]
 gi|298411190|gb|EAU93218.2| pre-mRNA splicing factor [Coprinopsis cinerea okayama7#130]
          Length = 597

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 52/340 (15%), Positives = 104/340 (30%), Gaps = 48/340 (14%)

Query: 133 VKDRKQII---GKKFFSSP-ASWRKIAHTISDD--IYQSITGEKGDFNSRILFVSESVV- 185
           V   K +    G+ + S P A    + H           +       +++ + V  +   
Sbjct: 246 VFHGKSMTDYQGRTYMSPPVAEAPHLLHEAGSQECFIPKVCVHTWTGHTQGVSVIRTFPQ 305

Query: 186 ------SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
                 SG +   + + D     N         + + +  FS + +K     YD      
Sbjct: 306 TGHLMISGSMDTKIKLWDVYTHGNCLRTFHGHVKAVKDICFSNDGRKFLSCAYDR----T 361

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
           + L DT   +  +R GN ++  +  +F  +  +  I +       I   D+ S    +  
Sbjct: 362 MKLWDTETGQCLQRFGNGKTPYV-VKFHPDEDKQHIFLAGMSDKKIIQYDMNSGEITQEY 420

Query: 298 TNTLFINISASYSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              L    + ++  ++ + V  SD    R     + V+       K I++    S     
Sbjct: 421 DQHLGPVNTITFVDENRRFVTTSDDKTIRAWDFDIPVV------IKYIAEPHMHSMPAVT 474

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVED----SNLQAPTWSPSGRSLIFS 407
             P     A          I V   D      +                +SP G+ +   
Sbjct: 475 LHPSNKYFAAQSLDN---QILVYSTDNFRQNRKKRFAGHSVAGYACQVGFSPDGKWI--- 528

Query: 408 RKKDGDTGSKLYSIDLNGRNETLI---NTPAYASDPQWVG 444
              DG+     +     GR ++ +   + P  A +  W+ 
Sbjct: 529 SSGDGEGNVVFWD-WKTGRIKSRLKAHSKPVIAHE--WLP 565


>gi|296225369|ref|XP_002758456.1| PREDICTED: WD repeat-containing protein 51A [Callithrix jacchus]
          Length = 407

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 87/233 (37%), Gaps = 18/233 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+ Q +A  + D    +R++
Sbjct: 31  TKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGQLLASGSRD--KTVRLW 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+   ++   D+ + ++S   Q      L+  
Sbjct: 89  VPNVKGESTSFR--AHTATVRSVHFCSDGQS-FVTASDDKTVKVWSTHRQ-KFLFSLSQH 144

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +   +  +      +  +      + P G  
Sbjct: 145 INWVRCAKFSPDGRLIVSASD---DKTVKLWDKSSRECVHSYCEHGSFVTYVDFHPSGTC 201

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
           IA            V        RLL    +  + + A ++ PSG  LI +  
Sbjct: 202 IAAAGMDNTVKVWDV-----RTHRLLQHYQLHSAAVNALSFHPSGSYLITASS 249


>gi|242813572|ref|XP_002486193.1| transcription initiation factor tfiid, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218714532|gb|EED13955.1| transcription initiation factor tfiid, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 714

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/292 (14%), Positives = 87/292 (29%), Gaps = 47/292 (16%)

Query: 157 TISDDIYQSITGEK---GDFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           + + ++YQ++  E    G F+        + S+V+G  +  L   D      +      D
Sbjct: 407 SFAHELYQTLDRENYNTGRFSDVTFLPADTNSLVTGTDRGYLQRWDIITGTPQESASIPD 466

Query: 212 QILF-EPRFSPNQQKVAYA--------------------------------TYDDEDILR 238
           +I+   P   P+ + V +                                     +  L 
Sbjct: 467 RIVMLAPA--PDGKSVWFVDGRCMVSRWLLRSSTMPMYGVSTGFLKNSYNVAVSPDGKLL 524

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
           V           +++G          FS +    + +  K     +   D  +   ++ +
Sbjct: 525 VGQDQLWYIPTGRQLGTMEGGHWPAAFSPD-SSLVAAGCKPPRAPLAIWDTATCTLQKEI 583

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T          ++PD   +V  S+      + +     +    I  D          +P 
Sbjct: 584 TGHSSFVTDVQFTPDGKLVVSASN---DHTVRLWDWTNNRMHSIIADSAHPINALAIAPN 640

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFS 407
           G L+A+     EK  I  +     +  +    S L +    +S  G+ L  +
Sbjct: 641 GRLLAYASAKAEKAWIWDIASSSRRAEITGYLSFLGSRGIAFSQDGQLLAVT 692



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLF 302
           I   P+   +    I+    + +GK        D    +    L+S+        T  L 
Sbjct: 454 ITGTPQESASIPDRIVMLAPAPDGKSVWFV---DGRCMVSRWLLRSSTMPMYGVSTGFLK 510

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            + + + SPD   +V      G++QL+ + +      R     E  ++   +SP   L+A
Sbjct: 511 NSYNVAVSPDGKLLV------GQDQLWYIPTG-----RQLGTMEGGHWPAAFSPDSSLVA 559

Query: 363 FTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                  +  + +        +  +    S +    ++P G+ ++ +    
Sbjct: 560 -AGCKPPRAPLAIWDTATCTLQKEITGHSSFVTDVQFTPDGKLVVSASNDH 609


>gi|331094834|ref|ZP_04589114.2| hypothetical protein POR16_17648 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331125391|ref|ZP_04593158.2| hypothetical protein POR16_38348 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331023512|gb|EGI03569.1| hypothetical protein POR16_17648 [Pseudomonas syringae pv. oryzae
           str. 1_6]
 gi|331027567|gb|EGI07622.1| hypothetical protein POR16_38348 [Pseudomonas syringae pv. oryzae
           str. 1_6]
          Length = 377

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 68/179 (37%), Gaps = 23/179 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FSS+G+   +  +    +  ++++ ++ A ++ +    +    + +P  ++    +D +
Sbjct: 206 AFSSDGRFLYVVGEMSGTVTSFAINRKTGALKQTSQAAGVPKRLNLAPGQARDARNNDLK 265

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                 +  ++                    +P G  +  ++ +    ++  +     + 
Sbjct: 266 DDPTPRIWAAD-----------------IRLAPNGKWLFTSERTTSSVSVFKVDPASGKV 308

Query: 384 RLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             +    V++   +    SP+GR L+ S +K    GS  Y+I  +G  + +   P+   
Sbjct: 309 TFVENYPVQEQQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIASDGALQRVSEAPSGKG 365


>gi|322498100|emb|CBZ33175.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 614

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 66/193 (34%), Gaps = 20/193 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP +   A  + +D     + L +  +             I++  FS +GK    +  
Sbjct: 327 ALSPAETDFASCSNED---ASITLNNFGVGSEVGIFTGHHDTIISATFSPDGKYLA-TAS 382

Query: 278 KDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSN 334
           KDE M ++ V   +     LT     + I   + PDS  +V      G       +  + 
Sbjct: 383 KDETMILWDV---TTTKILLTFAHPKVVICCCFGPDSKHLV-----SGCQDRVCRLWDTK 434

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNL 392
              +     + E       +SP G+ +           + V     ++ R  LL     +
Sbjct: 435 RGREWMNYTEHEGIIIAIAFSPDGNYVCSASADRS---LRVWSATTAKTRFHLLGHVGII 491

Query: 393 QAPTWSPSGRSLI 405
            + +++  GR +I
Sbjct: 492 LSCSYTSDGRHII 504



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 53/158 (33%), Gaps = 12/158 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +    FSP+ + +A A+ D+     + L D    +          +++   F
Sbjct: 358 IFTGHHDTIISATFSPDGKYLATASKDE----TMILWDVTTTKILLTFA-HPKVVICCCF 412

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREG 324
             + K  + S  +D    ++    +       T    I I+ ++SPD + +   S DR  
Sbjct: 413 GPDSKHLV-SGCQDRVCRLWDT-KRGREWMNYTEHEGIIIAIAFSPDGNYVCSASADRS- 469

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              L V  +  +  +              ++  G  I 
Sbjct: 470 ---LRVWSATTAKTRFHLLGHVGIILSCSYTSDGRHII 504



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 67/192 (34%), Gaps = 21/192 (10%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L DT+  R          +I+A  FS +G     S   D ++ ++S          L   
Sbjct: 430 LWDTKRGREWMNYTEHEGIIIAIAFSPDGNYVC-SASADRSLRVWSATTA-KTRFHLLGH 487

Query: 301 LFINISASYSPDSSQIVFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           + I +S SY+ D   I+          S  +G  +L +     +   + S       +  
Sbjct: 488 VGIILSCSYTSDGRHIISNDESLLRVWSAEDGSCKLSLSPVEVAGTLQPSHRAPKLGWTL 547

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW---SPSGRSLIFSRK 409
             +  G    F   +     + V+  D  +E   V  +  +AP +   + S   + F   
Sbjct: 548 SSAAPGSFTRFVLVACNNRFVYVIDIDTGRE---VASTFCKAPVYCLTAGSHEKMAF--- 601

Query: 410 KDGDTGSKLYSI 421
             GD+   +Y +
Sbjct: 602 --GDSFGNIYIL 611


>gi|218440130|ref|YP_002378459.1| hypothetical protein PCC7424_3190 [Cyanothece sp. PCC 7424]
 gi|218172858|gb|ACK71591.1| WD-40 repeat protein [Cyanothece sp. PCC 7424]
          Length = 358

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 53/145 (36%), Gaps = 9/145 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDRE 323
           FS++GK    +  +D  + I+ V  +    E L T   +I     + P  +Q+ F   R 
Sbjct: 73  FSADGKYLA-AGGQDGKLRIWQVKPELELIETLDTQNKWI-TCLHWHPKLNQVAFTLGR- 129

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + +      +       + +S  D  W PQGD +A       +  +          
Sbjct: 130 ---YVQIWDVITKEIVISLPFESSSVLDLAWHPQGDYLAIA--GDREVKVWSCSAWNDDP 184

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSR 408
            +L   +     +WSP+G  L  S 
Sbjct: 185 EMLDLPAACLGVSWSPNGEYLAASS 209



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 43/297 (14%), Positives = 94/297 (31%), Gaps = 57/297 (19%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F++   +++     G ++  +  +  +   I  L      I     + P   +VA+    
Sbjct: 73  FSADGKYLAAGGQDGKLR--IWQVKPELELIETLDTQNKWITCL-HWHPKLNQVAFTL-- 127

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 V + D         +    S +L   +   G    I+   D  + ++S    ++
Sbjct: 128 ---GRYVQIWDVITKEIVISLPFESSSVLDLAWHPQGDYLAIA--GDREVKVWSCSAWND 182

Query: 293 ATERLTNTLFINISASYSPDSSQIVFES-------DREGKEQLYVMQSNGSDQKRISQDK 345
             E L +     +  S+SP+   +   S        + G    + MQ  G   + +S   
Sbjct: 183 DPEML-DLPAACLGVSWSPNGEYLAASSLDLSVFVWQWGNLSPWRMQGFGGKVRNLSWST 241

Query: 346 EASYFDPV---------------------WSPQGDLIAFTKFSGEKFA-----IGVMKKD 379
                 P+                     W+P+G  +      G KF      +  + +D
Sbjct: 242 PTVGTAPLLAVSSVDGIVIWQKQAEDEQGWTPKGLRLHEGVIQGLKFQPKSLLLASVAED 301

Query: 380 G--------SQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           G         +    +E  +       W P+G  L  +  ++G+    ++    +G+
Sbjct: 302 GWLILWQKAKKPVQWLEGVSEGFSGLAWHPNGNYLA-AAGQNGE--LLVWVASESGK 355


>gi|156405196|ref|XP_001640618.1| predicted protein [Nematostella vectensis]
 gi|156227753|gb|EDO48555.1| predicted protein [Nematostella vectensis]
          Length = 453

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 87/242 (35%), Gaps = 44/242 (18%)

Query: 219 FSPNQQKVAYATYDDED-ILRVYLMDTRIDRAPKRIGNFR-------SMILAPRFSSNGK 270
            S +   +A+     +  + R+    T +    +++  F+          +  +FS +  
Sbjct: 127 ISSDGDSIAFVMNATKGEVARIKRNRTSLSGVSEKLEKFQPECNGLIGQTMICKFSPDNC 186

Query: 271 RALISVQKDEAM----------DIYSVD-LQSNATERLTNTLFINISASYSPDSSQIVFE 319
             L +   D             ++ S+D ++S     L++      S ++SPD S I F 
Sbjct: 187 YLLSAACVDFHTIRETNELRVWNVKSMDMIKSVVLRDLSDFCGFVTSCNFSPDGSFIAFS 246

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSP------------QGDLIAFTKF 366
           + +E   QL V+++   +   + + +   +    V++P             G +  +T+ 
Sbjct: 247 TSQE---QLCVLKAKTLEIVCVLRKRCRGNKCWCVFNPRYRNGVLACCLQDGRIEIWTRE 303

Query: 367 SGEKFAIGVMKKDGS----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                         +    +++ +   + L +  +S  G+ L       G + + +  +D
Sbjct: 304 DTAPHPTLSCDPQVTYTCDKQQRVTSSARLYSCQYSKDGKYLA-----AGTSEANIILLD 358

Query: 423 LN 424
            +
Sbjct: 359 PD 360


>gi|124004073|ref|ZP_01688920.1| hypothetical protein M23134_05465 [Microscilla marina ATCC 23134]
 gi|123990652|gb|EAY30132.1| hypothetical protein M23134_05465 [Microscilla marina ATCC 23134]
          Length = 977

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 65/181 (35%), Gaps = 13/181 (7%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                    K +  F        FS NG+       +D ++ I++   +     +L    
Sbjct: 510 QSVLWTLQGKLVRKFHDYFKFASFSPNGEYIATISDRDYSLKIWT--SRGKFLHQL---K 564

Query: 302 FINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +A +S D+  ++  S R G +   Y    + +    + + KEA+     +S  G  
Sbjct: 565 GEYNTAYFSADNRHLLTSSPRNGAQLWFYEKSYHNTMLMNVLKHKEAAVKMATFSHDGQR 624

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +      G      V   +G   ++L V  + + +  +S   + ++ +        +KL+
Sbjct: 625 VLTASNDGTA---KVWNVNGQLMKILKVSKTWVNSAIFSADDQMILTADDYG---TAKLW 678

Query: 420 S 420
           S
Sbjct: 679 S 679



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 51/144 (35%), Gaps = 7/144 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS + + +  ++  +   L  Y            + +  + +    FS +G+R L +   
Sbjct: 572 FSADNRHLLTSSPRNGAQLWFYEKSYHNTMLMNVLKHKEAAVKMATFSHDGQRVL-TASN 630

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D    ++  ++     + L  +     SA +S D  Q++  +D  G  +L+   S     
Sbjct: 631 DGTAKVW--NVNGQLMKILKVSKTWVNSAIFSAD-DQMILTADDYGTAKLW---SKEGKL 684

Query: 339 KRISQDKEASYFDPVWSPQGDLIA 362
               +         V+SP    I 
Sbjct: 685 LHTLRGHSQGLNGAVFSPDQQKIV 708



 Score = 39.6 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 51/120 (42%), Gaps = 14/120 (11%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           AS+SP+   I   SDR+   +++  +  G    ++  +   +YF    S     +  +  
Sbjct: 531 ASFSPNGEYIATISDRDYSLKIWTSR--GKFLHQLKGEYNTAYF----SADNRHLLTSSP 584

Query: 367 SGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                 +   +K      L+     +++ ++  T+S  G+ ++ +     D  +K+++++
Sbjct: 585 RNGA-QLWFYEKSYHNTMLMNVLKHKEAAVKMATFSHDGQRVLTASN---DGTAKVWNVN 640


>gi|145223500|ref|YP_001134178.1| YVTN beta-propeller repeat-containing protein [Mycobacterium gilvum
           PYR-GCK]
 gi|145215986|gb|ABP45390.1| 40-residue YVTN family beta-propeller repeat protein [Mycobacterium
           gilvum PYR-GCK]
          Length = 1067

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 71/205 (34%), Gaps = 16/205 (7%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-ISVQKDE 280
           N  +V     DD  + ++ ++   +      +    S I     S +G     +S    +
Sbjct: 337 NGSRVYVVNSDDGTVSKISMLTNTVVGKVYGVAEGVSEI---TISPDGSTIYTLSSTTGQ 393

Query: 281 AMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                S  L++  T  +T  +  I    ++S D S+ VF +D  G   + V+ +    Q 
Sbjct: 394 VSRFSSTALRAQQTVAVTPASQGI----TFSADGSR-VFVADIAGS--IRVLDAATGQQV 446

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---T 396
                     FD   SP G  +   +    K +   +        ++     +  P   +
Sbjct: 447 DSIAVTAGVPFDIAASPDGTTLYVARSEDGKLSAYDIATKTELTSVIANPYEVDGPPLIS 506

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
            SP G  L ++ +  G   + +  +
Sbjct: 507 VSPDGTQLYWA-EFGGTRVNVIALV 530



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 61/171 (35%), Gaps = 15/171 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +   +     + R      R  +        + +     FS++G R  ++  
Sbjct: 376 TISPDGSTIYTLSSTTGQVSRFSSTALRAQQTVAVTPASQGI----TFSADGSRVFVA-- 429

Query: 278 KDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D A  I  +D  +        +T  +  +I+A  SPD + +      +GK   Y + + 
Sbjct: 430 -DIAGSIRVLDAATGQQVDSIAVTAGVPFDIAA--SPDGTTLYVARSEDGKLSAYDI-AT 485

Query: 335 GSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            ++   +  +       P    SP G  + + +F G +  +  +  D +  
Sbjct: 486 KTELTSVIANPYEVDGPPLISVSPDGTQLYWAEFGGTRVNVIALVPDNADP 536


>gi|240279438|gb|EER42943.1| extracellular dipeptidyl-peptidase Dpp4 [Ajellomyces capsulatus
           H143]
 gi|325092567|gb|EGC45877.1| extracellular dipeptidyl-peptidase Dpp4 [Ajellomyces capsulatus
           H88]
          Length = 771

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 76/217 (35%), Gaps = 42/217 (19%)

Query: 252 RIGNFRSMILAPRFSSNGKRA-LISVQKDEAMDIYSVD-------LQSNATERLTNTLFI 303
           R+ ++   +L   F+        +S  KD        D       + +     L ++  +
Sbjct: 25  RLLSYNETVLQKAFAPETISVDWVSADKDGQYVYQKSDSTLVLQHIATETQRVLIDSDQV 84

Query: 304 NISA---SYSPDSSQIVFESDREGKEQ------LYVMQSNGSDQKRISQDKEASYFDPVW 354
              A    + PD S +++ ++   + +       ++      +   +++D+        W
Sbjct: 85  PDDAHEYFFKPDLSAVIWATNYTKQYRHSYFANYFIQDVESGELTPLAKDQAGDLQYAAW 144

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS---NLQAPTW-------------- 397
           SP G+ IA+ +  G    I    KDG+  ++  +         P W              
Sbjct: 145 SPVGNTIAYVR--GNNLFIW---KDGTTMQITSDGGVDTFNGVPDWVYEEEIFGDRYALW 199

Query: 398 -SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            SP G+ L F R    +TG   Y++     N+ +  +
Sbjct: 200 FSPDGQYLAFLRFD--ETGVPTYTVPYYMGNQEVPPS 234



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 47/170 (27%), Gaps = 30/170 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVY-----LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           F P+   V +AT   +     Y     + D           +    +    +S  G    
Sbjct: 93  FKPDLSAVIWATNYTKQYRHSYFANYFIQDVESGELTPLAKDQAGDLQYAAWSPVGNTIA 152

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASY---------------SPDSSQ 315
               +   + I+    +   T ++T+   ++       +               SPD   
Sbjct: 153 YV--RGNNLFIW----KDGTTMQITSDGGVDTFNGVPDWVYEEEIFGDRYALWFSPDGQY 206

Query: 316 IVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           + F   D  G     V    G+ +   S  KE     P  S     + F 
Sbjct: 207 LAFLRFDETGVPTYTVPYYMGNQEVPPSYPKELDIRYPKVSQTNPRVEFH 256



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/149 (10%), Positives = 40/149 (26%), Gaps = 25/149 (16%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQIL 214
            + DD ++          S +++ +            +  + D +   +  L   +   L
Sbjct: 83  QVPDDAHEYFFKPD---LSAVIWATNYTKQYRHSYFANYFIQDVESGELTPLAKDQAGDL 139

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF--------- 265
               +SP    +AY          +++            G   +    P +         
Sbjct: 140 QYAAWSPVGNTIAYV-----RGNNLFIWKDGTTMQITSDGGVDTFNGVPDWVYEEEIFGD 194

Query: 266 ------SSNGKRALISVQKDEAMDIYSVD 288
                 S +G+        +  +  Y+V 
Sbjct: 195 RYALWFSPDGQYLAFLRFDETGVPTYTVP 223


>gi|194206419|ref|XP_001488905.2| PREDICTED: similar to WD repeat domain 61 [Equus caballus]
          Length = 273

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 58/169 (34%), Gaps = 19/169 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 112 AFSPDSQYLATGTHVGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 166

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY-------- 329
            D  ++I+ +         L        S ++SPDS  +V  SD +G  ++Y        
Sbjct: 167 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD-DGYIKIYDVSSDKSV 224

Query: 330 -VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            V             D +   +   ++  G  I      G+   I +  
Sbjct: 225 KVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHIYD 270



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 57/155 (36%), Gaps = 12/155 (7%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S   D  + ++ ++      + +        + ++SPDS  +       GK  ++ +
Sbjct: 77  VAASSSLDAHIRLWDLE-NGKQIKSIDAGPVDAWTLAFSPDSQYLA-TGTHVGKVNIFGV 134

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           +S   +    ++ K        +SP G  +A     G    I +      +    +E   
Sbjct: 135 ESGKKEYSLDTRGKF--ILSIAYSPDGKYLASGAIDG---IINIFDIATGKLLHTLEGHA 189

Query: 392 L--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +  ++ T+SP  + L+ +     D   K+Y +  +
Sbjct: 190 MPIRSLTFSPDSQLLVTASD---DGYIKIYDVSSD 221



 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 66/194 (34%), Gaps = 33/194 (17%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQI  K   + P     +A 
Sbjct: 56  QWSLEGHQLGVVSVDISHTLPVAASSSLDAHIRLWDLENGKQI--KSIDAGPVDAWTLA- 112

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 113 -FSPDSQYLAT---GTHVGKVNI--FGVESGKKEYSL--------------DTRGKFILS 152

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 153 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 207

Query: 277 QKDEAMDIYSVDLQ 290
             D  + IY V   
Sbjct: 208 SDDGYIKIYDVSSD 221


>gi|115492261|ref|XP_001210758.1| predicted protein [Aspergillus terreus NIH2624]
 gi|114197618|gb|EAU39318.1| predicted protein [Aspergillus terreus NIH2624]
          Length = 376

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/180 (14%), Positives = 62/180 (34%), Gaps = 22/180 (12%)

Query: 264 RFSSNGKRALISVQKDEAMD----------IYSVDLQSNATE-RLTNTLFINISASYSPD 312
            FS +GK  +   Q +   +          +   D+++ +   +L       + A+ +PD
Sbjct: 158 SFSPDGKMMVFFSQNETTQEDTQEAASIPCVNLWDIETRSFRHKLLGHTDRVMWAAMAPD 217

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +  +   +  +G  +++   ++      +        +    SP    +A  + + + + 
Sbjct: 218 NKLVASVA-WDGTARVW--DASSGSCLYVLGPFGGQLWSGAISPDQKYLAIIQGNPKSY- 273

Query: 373 IGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           + V      Q     +  +L  ++ +WS  G  L       G    KL   D     E +
Sbjct: 274 VHVYDIATEQPVSCFDGFHLPPRSISWSHDGAMLA-----GGANEGKLCIWDPYTGEERM 328



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 72/241 (29%), Gaps = 39/241 (16%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRF-- 265
           D     P  SP+ + VA    ++     V++ D       + +       ++  AP F  
Sbjct: 50  DGAATTPTLSPDDRFVAVGVDEE-----VHVFDVATKERLEVLAVGELIETVKFAPDFVK 104

Query: 266 SSNGKRALISVQ----KDEAMDIYSVDLQS-NATERLTNTL------FINISASYSPDSS 314
           + +GK     +     +D    +   +L        +T+        F     S+SPD  
Sbjct: 105 NEDGKSTCYVLASQAGEDGNPMVILWELDQKGKLAAMTSHEQEHRLCFEGELGSFSPDGK 164

Query: 315 QIVFESDREGKEQ----------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +VF S  E  ++          + +        +               +P   L+A  
Sbjct: 165 MMVFFSQNETTQEDTQEAASIPCVNLWDIETRSFRHKLLGHTDRVMWAAMAPDNKLVASV 224

Query: 365 KFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            + G      V           L      L +   SP  + L       G+  S ++  D
Sbjct: 225 AWDGTA---RVWDASSGSCLYVLGPFGGQLWSGAISPDQKYLAII---QGNPKSYVHVYD 278

Query: 423 L 423
           +
Sbjct: 279 I 279



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 60/193 (31%), Gaps = 44/193 (22%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+    A+A    +                +           P  S + +   + V + 
Sbjct: 24  SPSGVPAAWAPGHPKR-----------WGQERAKIRLDGAATTPTLSPDDRFVAVGVDE- 71

Query: 280 EAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              +++  D+ +    E L     I     ++PD     F  + +GK   YV+ S   + 
Sbjct: 72  ---EVHVFDVATKERLEVLAVGELIETV-KFAPD-----FVKNEDGKSTCYVLASQAGE- 121

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                              G+ +       +K  +  M     + RL  E       ++S
Sbjct: 122 ------------------DGNPMVILWELDQKGKLAAMTSHEQEHRLCFEGELG---SFS 160

Query: 399 PSGRSLIFSRKKD 411
           P G+ ++F  + +
Sbjct: 161 PDGKMMVFFSQNE 173


>gi|332827961|gb|EGK00683.1| hypothetical protein HMPREF9455_02957 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 846

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/358 (13%), Positives = 114/358 (31%), Gaps = 76/358 (21%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            L++V   KQI+      S      +   +S+ ++  +  E G                 
Sbjct: 238 ELYNVSTGKQIL-LDTDGSKKQLSWMP--VSEKMFYLLKTEDGT---------------- 278

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-------------- 234
                 ++  D A ++    +++       FSP+++ + Y   +                
Sbjct: 279 -----NLISIDPATLQETILAKNIPDEYMTFSPDERTLFYTKQEKGEETKGDLKLLLSPE 333

Query: 235 -------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---- 283
                  +   +Y  D R     +++            S++ K+ L+S   +   +    
Sbjct: 334 DRQPGYTNRSFIYKYDIRSG-LSQQLTYGSHTTWLNDISADSKQLLVSFTDETVTERPFR 392

Query: 284 ---IYSVDLQSNATERLTNTLFINISASYSPDSSQI-------VF----------ESDRE 323
              +  +DL + + + L         A++SPD  ++        F          +    
Sbjct: 393 KYTMLKLDLPTMSVDTLWTNEGFAYGATFSPDGKKVLISGAGEAFGGIGQNIDAGQIANS 452

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                ++M  +      I+++ + S  +  W+ + +LI F     +   +      G   
Sbjct: 453 YNGLAFIMDLSTKQIDPITKNFDPSIDNSFWNKKDNLIYFRTTDKDYVNMYAYNPSGKTF 512

Query: 384 RLLVEDSNLQAPTWS-PSG--RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             L  +  +   ++S       ++ F   +   T + LY  D+  +  T++  P    
Sbjct: 513 TKLPLNEEVIR-SFSTADNALSAIYFGVSQSNSTRAYLY--DIKNQKSTMVADPYNDR 567



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 61/143 (42%), Gaps = 13/143 (9%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVM 331
            SVQ      +   D+     +R+TNT       S SP+       S R   G++ +   
Sbjct: 188 FSVQNTSKRFVNFTDMLLG--KRVTNT-------SMSPNGQY-ALISYRNTFGEKSVSTT 237

Query: 332 QS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +  N S  K+I  D + S     W P  + + +   + +   +  +     QE +L ++ 
Sbjct: 238 ELYNVSTGKQILLDTDGSKKQLSWMPVSEKMFYLLKTEDGTNLISIDPATLQETILAKNI 297

Query: 391 NLQAPTWSPSGRSLIFSRKKDGD 413
             +  T+SP  R+L +++++ G+
Sbjct: 298 PDEYMTFSPDERTLFYTKQEKGE 320


>gi|312070269|ref|XP_003138068.1| WD-repeat protein HUSSY-07 [Loa loa]
 gi|307766763|gb|EFO25997.1| WD-repeat protein HUSSY-07 [Loa loa]
          Length = 482

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/191 (15%), Positives = 71/191 (37%), Gaps = 16/191 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P   + +   +FSPN +++A  + D    +R + ++T       R     + +L   +S
Sbjct: 110 LPGHGEPVISVQFSPNGRELASGSGDA--TVRFWDLNTETPLHTAR--GHTNWVLCIAWS 165

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-----SPDSSQIVFESD 321
            +GK+   S  K+  + +++    +   +++T+         +     +P    +   + 
Sbjct: 166 PDGKKLA-SACKNGHICLWNPKTGTQIGKKMTSHKQWINQLVWEPYHKNPHCRHLA-SAA 223

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           ++G  ++ +  +   +  R      AS     W   G  + +T        +     DG 
Sbjct: 224 KDG--EIRIWDTVKCEMVRCLTGHTASVTCVKW--GGQGLIYTGSQDRTIKVWRAD-DGV 278

Query: 382 QERLLVEDSNL 392
             R L   ++ 
Sbjct: 279 LCRTLAGHAHW 289



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 4/135 (2%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             L+S   D  +  +    +     R+T    +     +SP++  I   S     + + +
Sbjct: 339 ELLVSGSDDFTLFFWKPTDEKKPRTRMTGHQQLVNQVMFSPNARYIASASF---DKSIKL 395

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                       +    + +   WS    L+  +  +     +  M K G    L     
Sbjct: 396 WCGRTGAFLDTLRGHVQAVYQIAWSADSRLLV-SGSADSTLKVWDMHKRGLCMDLPGHGD 454

Query: 391 NLQAPTWSPSGRSLI 405
            + A  WSP G  + 
Sbjct: 455 EVYAVDWSPDGTRVA 469



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 28/94 (29%), Gaps = 10/94 (10%)

Query: 292 NATERLTNTLFINISAS----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
               R T++L  +        +SP+  ++   S   G   +     N       ++    
Sbjct: 101 RPVTRCTSSLPGHGEPVISVQFSPNGRELASGS---GDATVRFWDLNTETPLHTARGHTN 157

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 WSP G  +A    +G    I +      
Sbjct: 158 WVLCIAWSPDGKKLASACKNG---HICLWNPKTG 188


>gi|302695397|ref|XP_003037377.1| hypothetical protein SCHCODRAFT_104127 [Schizophyllum commune H4-8]
 gi|300111074|gb|EFJ02475.1| hypothetical protein SCHCODRAFT_104127 [Schizophyllum commune H4-8]
          Length = 611

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 53/314 (16%), Positives = 99/314 (31%), Gaps = 81/314 (25%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGA----------NIRYLTPSRDQILFEPRFSPNQQ 224
            R +  S S    I    L     DG           N   + P +D       +SP+ +
Sbjct: 256 DRNIVASGSKDGHINIWRLNDPPADGFSTPPPPPIRFNAESIIPDKDLTSM--SWSPDGK 313

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +A  +YD     RV+ + T   +   +    +  I   R+S NGK  L +   D    +
Sbjct: 314 LLAVGSYD-----RVFRILTVEGKLYFQHSLHKGAIFVVRYSPNGKYIL-TASLDGTAGL 367

Query: 285 YSVDLQSNATER----------LTNTL----FINISASY--------------------- 309
           +  +  + +  R          +T+ L      +  A+                      
Sbjct: 368 W--NPANKSLVRQYQAHTDVCWITDELFASCGADARANILSVNQREPLKTLSGHRTEINQ 425

Query: 310 ---SPDSSQIVFES-DREGK----EQLYVMQSNGSD---------QKRISQDKEASYFDP 352
              + D +++   S DR  +     ++      G D         +  + +  E      
Sbjct: 426 IKANRDGTKLATCSDDRTARVWDISRIRASSPAGEDFPGLGSTDMRSVVLEGHEKGVSTI 485

Query: 353 VWSP---QG--DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            W P    G  +L+A + F G    + V +   S          + A ++ P G+ L   
Sbjct: 486 TWQPALVDGCPELVATSSFDGTA-RLWVARTGRSYAVFRDNKRAVYAISFRPDGKFLA-- 542

Query: 408 RKKDGDTGSKLYSI 421
               GD    +Y++
Sbjct: 543 -TGSGDGFVHIYNV 555



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 45/141 (31%), Gaps = 16/141 (11%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD---LQSNATERL 297
           + D    R    +    + +    F+   +  + S  KD  ++I+ ++       +T   
Sbjct: 228 VDDVTDKRVAVLLSGHTAEVFVCAFNPQDRNIVASGSKDGHINIWRLNDPPADGFSTPPP 287

Query: 298 TNTLFIN---------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
               F            S S+SPD   +   S     ++++ + +            + +
Sbjct: 288 PPIRFNAESIIPDKDLTSMSWSPDGKLLAVGS----YDRVFRILTVEGKLYFQHSLHKGA 343

Query: 349 YFDPVWSPQGDLIAFTKFSGE 369
            F   +SP G  I      G 
Sbjct: 344 IFVVRYSPNGKYILTASLDGT 364



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 46/119 (38%), Gaps = 14/119 (11%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQ---SNG---SDQKRISQDKEA-----SYFDPVWSP 356
           +++P    IV    ++G   ++ +    ++G        I  + E+           WSP
Sbjct: 251 AFNPQDRNIVASGSKDGHINIWRLNDPPADGFSTPPPPPIRFNAESIIPDKDLTSMSWSP 310

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            G L+A   +    F I  ++     +  L     +    +SP+G+ ++ +   DG  G
Sbjct: 311 DGKLLAVGSYD-RVFRILTVEGKLYFQHSL-HKGAIFVVRYSPNGKYIL-TASLDGTAG 366


>gi|290989541|ref|XP_002677396.1| predicted protein [Naegleria gruberi]
 gi|284091003|gb|EFC44652.1| predicted protein [Naegleria gruberi]
          Length = 449

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/202 (12%), Positives = 73/202 (36%), Gaps = 23/202 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + + +          + V+ +     +   +I    + +   RFS + +  L++   
Sbjct: 55  WSADNEFIL-CAQYKRACVEVWSISDNTWKC--KIEEGPAGVSYARFSPDSRHVLVTADF 111

Query: 279 DEAMDIYSV---------DLQSNATERL----TNTLFINISASYSPDSSQIVFESDREGK 325
              + I+S+         D  S     +      +  I+ + +       +     R+ K
Sbjct: 112 QLRITIWSILKNNSLTDNDEFSGHVAHIKYPKFTSKGIDFTPN---GGKYMALAERRDCK 168

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + ++ +   +  +    +  +  D  WSP G  +        ++++ +    GS+   
Sbjct: 169 DYISIIVTETWELVKHFPVRTKNLADLKWSPDGRFLVVWDHQ-IEYSVTIYSPAGSEIAH 227

Query: 386 LV---EDSNLQAPTWSPSGRSL 404
                +   +++  WSP+G+ L
Sbjct: 228 YSAYNDLLGVKSVKWSPNGQLL 249



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 83/220 (37%), Gaps = 27/220 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FSPN + +A ++       R+ + D    +   RI     +I    +S++ +  L +  
Sbjct: 14  KFSPNGKYIASSS-----GYRLVIKDVESLQVL-RIYTCSDVISQIEWSADNEFILCAQY 67

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM------ 331
           K   ++++S+   +    ++         A +SPDS  ++  +D + +  ++ +      
Sbjct: 68  KRACVEVWSIS-DNTWKCKIEEGPAGVSYARFSPDSRHVLVTADFQLRITIWSILKNNSL 126

Query: 332 ---QSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKFSGEKFAIGVMKKDGSQERL-- 385
                       I   K  S     ++P G   +A  +    K  I ++  +  +     
Sbjct: 127 TDNDEFSGHVAHIKYPKFTS-KGIDFTPNGGKYMALAERRDCKDYISIIVTETWELVKHF 185

Query: 386 LVEDSNLQAPTWSPSGRSLI-------FSRKKDGDTGSKL 418
            V   NL    WSP GR L+       +S       GS++
Sbjct: 186 PVRTKNLADLKWSPDGRFLVVWDHQIEYSVTIYSPAGSEI 225


>gi|240281508|gb|EER45011.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
          Length = 826

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 75/206 (36%), Gaps = 22/206 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ Q +A  ++ D+    + L D +       +      +++  FS +G+  + S   D
Sbjct: 208 SPDGQFLACTSHFDDK---IRLWDLKRIAIHSTLEGHVDYVISIAFSPDGEYIV-STSLD 263

Query: 280 EAMDIYSVD------LQSNATERL---TNTLFINISAS---YSPDSSQIVFESDREGKEQ 327
           +++ ++ V       L S  ++ L   + +L      +   +SP+   I       G +Q
Sbjct: 264 KSIRLWEVKKGRSKILFSGKSDLLLEKSQSLSFETRTNGTIFSPNGEFIAGYIHGLGHDQ 323

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERL 385
           + +  +  +     +           +S  G  IA +  S     I   +          
Sbjct: 324 VQLWDAKTNCLVG-TLPHPRFILALAFSYDGKFIA-SACSDGTVRIWDPRTATLCGILTQ 381

Query: 386 LVED-SNLQAP-TWSPSGRSLIFSRK 409
           +    ++  +P  +SP G+S+     
Sbjct: 382 VKSGYADCISPFAFSPDGQSIACISH 407



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 72/220 (32%), Gaps = 16/220 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPK--RI 253
           I          +    FSP+ + +   +       ++ +      L   + D   +  + 
Sbjct: 234 IHSTLEGHVDYVISIAFSPDGEYIVSTSLDKSIRLWEVKKGRSKILFSGKSDLLLEKSQS 293

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPD 312
            +F +      FS NG+     +       +   D ++N     L +  FI ++ ++S D
Sbjct: 294 LSFETRTNGTIFSPNGEFIAGYIHGLGHDQVQLWDAKTNCLVGTLPHPRFI-LALAFSYD 352

Query: 313 SSQIVFESDREGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
              I   +  +G  +++  ++        ++            +SP G  IA        
Sbjct: 353 GKFIA-SACSDGTVRIWDPRTATLCGILTQVKSGYADCISPFAFSPDGQSIACISH--GA 409

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
             I  +K       +  +   +   T+SP  R L  +  +
Sbjct: 410 VEIWDLKSLSLCGTIENDTEAITCITFSPDSRLLAAASGR 449



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 74/257 (28%), Gaps = 22/257 (8%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           + + +      +S   W  +   I   I Q+   E   F     +V   +     +    
Sbjct: 480 NGQFVASGSLDNSVRLWDTMGLGIPSSIIQTHISE-IKFTGSGHYVVSYLSDETTELR-- 536

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
             D       +  P   Q   +  FSP    +AY   D      V L +    +    + 
Sbjct: 537 --DPSTGVPMFTLPDFLQFSDKVEFSPVNNLLAYTDDDT-----VNLWNMATRKFYGSLT 589

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDS 313
               ++    FS +G    +S Q      I   DL       +      ++    YS D 
Sbjct: 590 ITDRVVKTIAFSPDGNDLAVSYQ---NHAIVIWDLMIKKRRYVLKGHADDVYKLEYSSDG 646

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-----FTKFSG 368
             +V  S     + L +      +   +   ++   +D   S     I      F     
Sbjct: 647 HLLVSASR---DDSLRLWDPATGELIGLLGRRKGRIWDMAVSSDAKAIICISGHFVTVWD 703

Query: 369 EKFAIGVMKKDGSQERL 385
               +  M+ D   +++
Sbjct: 704 SSTKLIKMELDLKDKQV 720



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 78/255 (30%), Gaps = 48/255 (18%)

Query: 204 RYLTPSRDQILFEP--------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           R++   R  I   P         FSP +  +    +++     V ++    D  P  +  
Sbjct: 92  RFILNFRSVIEAAPLQIYSSALVFSPKKSIIREQFWEEVPPWIVDVVSAEEDWNPSLLTL 151

Query: 256 FRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----SY 309
             S  +    FS +    + S        I + D  + A       +  +  A       
Sbjct: 152 EHSCSVEDISFSPDSDFLISS----GGNLINAWDTTTGAFRYAIPDISQSAFALKRQEVL 207

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYF-DPVWSPQGDLIAFT 364
           SPD   +   S  + K +L+       D KRI    + +    Y     +SP G+ I  T
Sbjct: 208 SPDGQFLACTSHFDDKIRLW-------DLKRIAIHSTLEGHVDYVISIAFSPDGEYIVST 260

Query: 365 KFSGEKFAIGVMKKDGSQERLLVED---------------SNLQAPTWSPSGRSLIFSRK 409
                   I + +    + ++L                  +      +SP+G  +     
Sbjct: 261 SLDKS---IRLWEVKKGRSKILFSGKSDLLLEKSQSLSFETRTNGTIFSPNGEFIAGYIH 317

Query: 410 KDGDTGSKLYSIDLN 424
             G    +L+    N
Sbjct: 318 GLGHDQVQLWDAKTN 332



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 31/187 (16%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSN----ATERLTNTLFINISA-SYSPDSSQIVFE 319
           FS   K+++I  Q  E +  + VD+ S         LT     ++   S+SPDS  ++  
Sbjct: 115 FSP--KKSIIREQFWEEVPPWIVDVVSAEEDWNPSLLTLEHSCSVEDISFSPDSDFLI-- 170

Query: 320 SDREGKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
               G   +    +     +     ISQ   A     V SP G  +A T    +K  +  
Sbjct: 171 --SSGGNLINAWDTTTGAFRYAIPDISQSAFALKRQEVLSPDGQFLACTSHFDDKIRLWD 228

Query: 376 MKKDGSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +K      R+ +  +            +SP G  ++ +     D   +L+ +   GR++ 
Sbjct: 229 LK------RIAIHSTLEGHVDYVISIAFSPDGEYIVSTSL---DKSIRLWEVK-KGRSKI 278

Query: 430 LINTPAY 436
           L +  + 
Sbjct: 279 LFSGKSD 285


>gi|195446950|ref|XP_002070997.1| GK25372 [Drosophila willistoni]
 gi|194167082|gb|EDW81983.1| GK25372 [Drosophila willistoni]
          Length = 466

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/108 (15%), Positives = 38/108 (35%), Gaps = 5/108 (4%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  ++ + + +   S   G   + + + +    + + +          WSP  D + F 
Sbjct: 236 TSLQWNKNGNLLATSSI--GDRSILIWEPDSGQMQVLKRLGPPGSLVK-WSPDNDWL-FA 291

Query: 365 KFSGEKFAIGV-MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                 F +     +  ++  +      +Q   WSP GR L+F    +
Sbjct: 292 STVDRVFRVWNCYNEWTTERWVCGNGGTVQTACWSPCGRFLLFVSTSE 339



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 62/179 (34%), Gaps = 23/179 (12%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +      +  +   +++ N   +A ++  D  IL ++  D+   +  KR+G   S++   
Sbjct: 225 QTFKHPANLPITSLQWNKNGNLLATSSIGDRSIL-IWEPDSGQMQVLKRLGPPGSLV--- 280

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           ++S +      +   D    +++   +      +        +A +SP    ++F S  E
Sbjct: 281 KWSPDNDWL-FASTVDRVFRVWNCYNEWTTERWVCGNGGTVQTACWSPCGRFLLFVSTSE 339

Query: 324 G-------KEQLYVMQSNGSDQKRI------SQDKEASYFDP-----VWSPQGDLIAFT 364
                     Q  +  ++  +   I      S D   +          W P G+ +  T
Sbjct: 340 PILYRLQFVPQQMLKSTDDKEVLPIADLNACSLDGNQTLIGGPVQQLAWDPHGNYLVIT 398



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 4/103 (3%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           ++ NG     S   D ++ I+  D  S   + L           +SPD+  + F S  + 
Sbjct: 240 WNKNGNLLATSSIGDRSILIWEPD--SGQMQVLKRLGPPGSLVKWSPDNDWL-FASTVDR 296

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +++   +  + ++ +  +   +     WSP G  + F   S
Sbjct: 297 VFRVWNCYNEWTTERWVCGNG-GTVQTACWSPCGRFLLFVSTS 338


>gi|332816956|ref|XP_003309870.1| PREDICTED: POC1 centriolar protein homolog A isoform 1 [Pan
           troglodytes]
          Length = 358

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 84/233 (36%), Gaps = 18/233 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 30  TKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRD--KTVRIW 87

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+   ++   D+ + +++   Q      L+  
Sbjct: 88  VPNVKGESTVFR--AHTATVRSVHFCSDGQS-FVTASDDKTVKVWATHRQ-KFLFSLSQH 143

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +   +  +      +         + P G  
Sbjct: 144 INWVRCAKFSPDGRLIVSASD---DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTC 200

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
           IA            V        RLL    +  + +   ++ PSG  LI +  
Sbjct: 201 IAAAGMDNTVKVWDV-----RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 248



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 67/225 (29%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +      +  +    +    F  + Q    A+ D      V +  T 
Sbjct: 77  SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK----TVKVWATH 132

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             +    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 133 RQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKSSRECVHSYCEHGGFV 189

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + I           + V         +  Q   A+     + P G+ +   
Sbjct: 190 TYVDFHPSGTCIAAAGM---DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITA 246

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 247 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 281


>gi|317029658|ref|XP_001392061.2| chromosome segregation protein (SepB) [Aspergillus niger CBS
           513.88]
          Length = 838

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 87/269 (32%), Gaps = 27/269 (10%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                E  D +  I   +ES + G    ++   + +   +  L       + +   S + 
Sbjct: 50  PKTIDEGVDGHLGIGATNESFIMGAEDGTVWQYEIESGRMEKLLVRCALPVRDIAVSKDG 109

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +  A A+    D L V +++       K +           F  +G+   +S   D  + 
Sbjct: 110 EWAAVAS----DELTVKVVNIEDMTKVKYLREQAKGTKHVTFDPSGRYVTVSCT-DGMLY 164

Query: 284 IYSVDLQ--------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           IYS+                RL           + PD +   F S    ++         
Sbjct: 165 IYSMLSDEPELVRKVDGVIRRLEPEDEATSQIVWHPDGT--AFASAEATRDIAIFSVGEW 222

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQ 393
             +K  S           WSP G L+A     G+     V+  +   +++L   + +N+ 
Sbjct: 223 KKEKVFSGGHNGEVTAISWSPNGALLATAGKDGQ-----VLLWETKSQKVLERYDFANVI 277

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              W PS  SL F+         +L+  D
Sbjct: 278 NLAWHPSNNSLSFTTSDG-----ELFIYD 301


>gi|301787915|ref|XP_002929374.1| PREDICTED: WD repeat-containing protein 1-like [Ailuropoda
           melanoleuca]
          Length = 662

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 72/244 (29%), Gaps = 55/244 (22%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   +++P+   +A  + D    LR++    +          F   I    +
Sbjct: 109 IYTEHAHQVVVAKYAPSGFYIA--SGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAW 166

Query: 266 SSNGKRALISVQK--------------------DEAMDIYSVDLQSNATERLTNTLFINI 305
           + + KR  +  +                          I SVD++ +   RL      N 
Sbjct: 167 TEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNC 226

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A +             EG    +              D         +SP G+  A   
Sbjct: 227 AAFF-------------EGPPFKFKFTIG---------DHGRFVNCVRFSPDGNRFATAS 264

Query: 366 FSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G    I V      ++          D  + A +WSP    L+      GD  SK++ 
Sbjct: 265 ADG---QIYVYDGKTGEKVCALGGGKAHDGGIYAISWSPDSTHLL---SASGDKTSKIWD 318

Query: 421 IDLN 424
           +++N
Sbjct: 319 VNVN 322



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 92/281 (32%), Gaps = 42/281 (14%)

Query: 44  NYSPVSI-AFTK-FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ 101
              P+ + A  K F S+ ++   VS+++  D + ++      +    + I NP     + 
Sbjct: 52  GRQPLPVEATEKVFASLPQVERGVSKIIGGDPKGNNFIYTNGKCVILRNIDNPALADIYT 111

Query: 102 DWNSLGAQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA-- 155
           +     A  +V  +    G       +  + R+WD   ++ ++  ++       + IA  
Sbjct: 112 E----HAHQVVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWT 167

Query: 156 -------------HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD--- 199
                                       G+       ++   +       L     D   
Sbjct: 168 EDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCA 227

Query: 200 ----GANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
               G   ++     D   F    RFSP+  + A A+ D     ++Y+ D +       +
Sbjct: 228 AFFEGPPFKFKFTIGDHGRFVNCVRFSPDGNRFATASADG----QIYVYDGKTGEKVCAL 283

Query: 254 GNFR---SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           G  +     I A  +S +    L S   D+   I+ V++ S
Sbjct: 284 GGGKAHDGGIYAISWSPDSTHLL-SASGDKTSKIWDVNVNS 323


>gi|265754565|ref|ZP_06089617.1| peptidase [Bacteroides sp. 3_1_33FAA]
 gi|263234679|gb|EEZ20247.1| peptidase [Bacteroides sp. 3_1_33FAA]
          Length = 631

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 67/172 (38%), Gaps = 19/172 (11%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG- 324
           S +GK        +  ++++  ++ S+   R+T+    +++ S   +  +I++  D  G 
Sbjct: 44  SPDGKYFSYMAPYENRLNLFVQEVGSDKATRITSETVRDLAGSMWANGHRILYIKDTAGD 103

Query: 325 -KEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGVMKKDG 380
              QLY +  +G+D K  +       +  DP+ +    +I    K + + F    +  + 
Sbjct: 104 ENFQLYGVNVDGTDPKAYTAFPKVRTTIIDPLENIDSLVIIGLNKRNPQVFDPYRLNLNN 163

Query: 381 SQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +   L E   N+Q            +    +G     L  +D  G N  ++
Sbjct: 164 GELTQLAENPGNIQG-----------WMTDHNGKLRVALAIVD--GVNTQIL 202



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKD 411
            SP G   ++      +  + V +    +   +  ++  +L    W+ +G  +++ +   
Sbjct: 43  ISPDGKYFSYMAPYENRLNLFVQEVGSDKATRITSETVRDLAGSMWA-NGHRILYIKDTA 101

Query: 412 GDTGSKLYSIDLNGR 426
           GD   +LY ++++G 
Sbjct: 102 GDENFQLYGVNVDGT 116


>gi|212692664|ref|ZP_03300792.1| hypothetical protein BACDOR_02161 [Bacteroides dorei DSM 17855]
 gi|212664742|gb|EEB25314.1| hypothetical protein BACDOR_02161 [Bacteroides dorei DSM 17855]
          Length = 631

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 67/172 (38%), Gaps = 19/172 (11%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG- 324
           S +GK        +  ++++  ++ S+   R+T+    +++ S   +  +I++  D  G 
Sbjct: 44  SPDGKYFSYMAPYENRLNLFVQEVGSDKATRITSETVRDLAGSMWANGHRILYIKDTAGD 103

Query: 325 -KEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGVMKKDG 380
              QLY +  +G+D K  +       +  DP+ +    +I    K + + F    +  + 
Sbjct: 104 ENFQLYGVNVDGTDPKAYTAFPKVRTTIIDPLENIDSLVIIGLNKRNPQVFDPYRLNLNN 163

Query: 381 SQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +   L E   N+Q            +    +G     L  +D  G N  ++
Sbjct: 164 GELTQLAENPGNIQG-----------WMTDHNGKLRVALAIVD--GVNTQIL 202



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKD 411
            SP G   ++      +  + V +    +   +  ++  +L    W+ +G  +++ +   
Sbjct: 43  ISPDGKYFSYMAPYENRLNLFVQEVGSDKATRITSETVRDLAGSMWA-NGHRILYIKDTA 101

Query: 412 GDTGSKLYSIDLNGR 426
           GD   +LY ++++G 
Sbjct: 102 GDENFQLYGVNVDGT 116


>gi|133778015|gb|AAI19694.1| WDR51A protein [Homo sapiens]
          Length = 441

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 84/233 (36%), Gaps = 18/233 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 65  TKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRD--KTVRIW 122

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+   ++   D+ + +++   Q      L+  
Sbjct: 123 VPNVKGESTVFR--AHTATVRSVHFCSDGQS-FVTASDDKTVKVWATHRQ-KFLFSLSQH 178

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +   +  +      +         + P G  
Sbjct: 179 INWVRCAKFSPDGRLIVSASD---DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTC 235

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
           IA            V        RLL    +  + +   ++ PSG  LI +  
Sbjct: 236 IAAAGMDNTVKVWDV-----RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 283



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 67/225 (29%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +      +  +    +    F  + Q    A+ D      V +  T 
Sbjct: 112 SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK----TVKVWATH 167

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             +    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 168 RQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKSSRECVHSYCEHGGFV 224

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + I           + V         +  Q   A+     + P G+ +   
Sbjct: 225 TYVDFHPSGTCIAAAGM---DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITA 281

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 282 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 316


>gi|239787754|ref|NP_056241.3| POC1 centriolar protein homolog A isoform 1 [Homo sapiens]
 gi|91207986|sp|Q8NBT0|POC1A_HUMAN RecName: Full=POC1 centriolar protein homolog A; AltName: Full=WD
           repeat-containing protein 51A
 gi|110645868|gb|AAI19693.1| WD repeat domain 51A [Homo sapiens]
 gi|119585590|gb|EAW65186.1| WD repeat domain 51A, isoform CRA_b [Homo sapiens]
          Length = 407

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 84/233 (36%), Gaps = 18/233 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 31  TKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRD--KTVRIW 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+   ++   D+ + +++   Q      L+  
Sbjct: 89  VPNVKGESTVFR--AHTATVRSVHFCSDGQS-FVTASDDKTVKVWATHRQ-KFLFSLSQH 144

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +   +  +      +         + P G  
Sbjct: 145 INWVRCAKFSPDGRLIVSASD---DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTC 201

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
           IA            V        RLL    +  + +   ++ PSG  LI +  
Sbjct: 202 IAAAGMDNTVKVWDV-----RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 249



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 67/225 (29%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +      +  +    +    F  + Q    A+ D      V +  T 
Sbjct: 78  SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK----TVKVWATH 133

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             +    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 134 RQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKSSRECVHSYCEHGGFV 190

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + I           + V         +  Q   A+     + P G+ +   
Sbjct: 191 TYVDFHPSGTCIAAAGM---DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITA 247

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 248 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 282


>gi|239787760|ref|NP_001155052.1| POC1 centriolar protein homolog A isoform 2 [Homo sapiens]
 gi|83406042|gb|AAI10878.1| WDR51A protein [Homo sapiens]
 gi|119585589|gb|EAW65185.1| WD repeat domain 51A, isoform CRA_a [Homo sapiens]
          Length = 359

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 84/233 (36%), Gaps = 18/233 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 31  TKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRD--KTVRIW 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+   ++   D+ + +++   Q      L+  
Sbjct: 89  VPNVKGESTVFR--AHTATVRSVHFCSDGQS-FVTASDDKTVKVWATHRQ-KFLFSLSQH 144

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +   +  +      +         + P G  
Sbjct: 145 INWVRCAKFSPDGRLIVSASD---DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTC 201

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
           IA            V        RLL    +  + +   ++ PSG  LI +  
Sbjct: 202 IAAAGMDNTVKVWDV-----RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 249



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 67/225 (29%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +      +  +    +    F  + Q    A+ D      V +  T 
Sbjct: 78  SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK----TVKVWATH 133

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             +    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 134 RQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKSSRECVHSYCEHGGFV 190

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + I           + V         +  Q   A+     + P G+ +   
Sbjct: 191 TYVDFHPSGTCIAAAGM---DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITA 247

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 248 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 282


>gi|325920850|ref|ZP_08182748.1| YVTN family beta-propeller repeat protein [Xanthomonas gardneri
           ATCC 19865]
 gi|325548668|gb|EGD19624.1| YVTN family beta-propeller repeat protein [Xanthomonas gardneri
           ATCC 19865]
          Length = 296

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 52/130 (40%), Gaps = 10/130 (7%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  Q       EG+ Q+ ++ +     +++   +  +     ++P G  +  +     
Sbjct: 84  SPDGKQFAVCV--EGQNQVMLIDAAQFKLQQVIATRGQAPEHCAYTPDGQWLLTSNEGSN 141

Query: 370 KFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                +++    Q R ++    + +   ++P G S+  ++    +T + +  IDL  R +
Sbjct: 142 DMD--MIELATRQSRGVVATSGHPRGMAFAPDGHSVYIAQ----ETANVVDVIDLKAR-Q 194

Query: 429 TLINTPAYAS 438
              + PA   
Sbjct: 195 RRASLPAGVR 204



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 53/157 (33%), Gaps = 10/157 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDR 322
             S +GK+  + V+      +  +D      +++  T        +Y+PD   ++  S+ 
Sbjct: 82  ALSPDGKQFAVCVE--GQNQVMLIDAAQFKLQQVIATRGQAPEHCAYTPDGQWLL-TSN- 137

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           EG   + +++      + +            ++P G  +   + +     + V+     Q
Sbjct: 138 EGSNDMDMIELATRQSRGVVATSGHPRGM-AFAPDGHSVYIAQETAN--VVDVIDLKARQ 194

Query: 383 ERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            R  L           S  G  L ++      T S +
Sbjct: 195 RRASLPAGVRTAGVALSADGARL-YASNGGAGTVSVI 230



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 75/193 (38%), Gaps = 13/193 (6%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +N + ++D     ++ +  +R Q      ++P+ Q +  +     D+  + L   +   
Sbjct: 96  GQNQVMLIDAAQFKLQQVIATRGQAPEHCAYTPDGQWLLTSNEGSNDMDMIELATRQSRG 155

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
                G+ R M     F+ +G    I+  ++ A  +  +DL++    R +    +  +  
Sbjct: 156 VVATSGHPRGM----AFAPDGHSVYIA--QETANVVDVIDLKARQ-RRASLPAGVRTAGV 208

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + S D +++ + S+  G   + V+ +  +            + +P  +P GD +     +
Sbjct: 209 ALSADGARL-YASN-GGAGTVSVIDTKSARSLAEIAVGLRPW-NPALTPAGDKLYVA--N 263

Query: 368 GEKFAIGVMKKDG 380
           G    + V+    
Sbjct: 264 GRSNTVSVIDTAT 276


>gi|254562008|ref|YP_003069103.1| cytochrome C, class I [Methylobacterium extorquens DM4]
 gi|254269286|emb|CAX25252.1| Cytochrome c, class I [Methylobacterium extorquens DM4]
          Length = 436

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 74/237 (31%), Gaps = 20/237 (8%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G  N+          S      + +     A    +       +     SP+   +A A 
Sbjct: 70  GAVNAMAALSDGRFASASEDGRIALWRLGQAEPDCVLAGHAGPVAGLAVSPDGTMLASAA 129

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +D     R++ +        + +   +  + A  F  +G+  L++   D ++ I+++   
Sbjct: 130 WD--GTARIWPL---AGGPARVLEGHKGNVNAVAFLPDGR--LVTAGADASVRIWTL--- 179

Query: 291 SNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                 LT TL   +SA + + D           G +      +     +   +   A  
Sbjct: 180 -QGETVLTATLPSALSALAVTTDGEIAA-----AGADATVRFLAPDGQVRSEVELGPAPV 233

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLI 405
                +P G  IA     G    I   +  G     LV     + +  W P G  L+
Sbjct: 234 IALAPAPAGTRIAAASAGGTVAMIE--RASGKILFTLVGPGLPVWSVAWRPDGSELV 288


>gi|148231147|ref|NP_001085834.1| apoptotic peptidase activating factor 1 [Xenopus laevis]
 gi|49115497|gb|AAH73405.1| MGC80868 protein [Xenopus laevis]
          Length = 1248

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 74/231 (32%), Gaps = 45/231 (19%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
              +       +F   FSP+ +K A    D      + +  +        +      +L 
Sbjct: 607 PTLVVRPHKDAVFHACFSPDGRKFASCGADK----TLQVFRSETGEKLLELEAHDDEVLC 662

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-------------TNTLFINISASY 309
             FS++ ++ L +   D  + I+  + ++    R+             TN L   + A+ 
Sbjct: 663 CAFSAD-EKLLATCSADRKVKIW--NAKTGKPIRVYEEHTEQVNCCQFTNGLSAPLLATC 719

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S D     F         + +  S     +        + +   +SP    +A +   G 
Sbjct: 720 SND----CF---------IMLWDSETEYSRNTLIGHTGAVYHCRYSPDDRYLASSSMDGS 766

Query: 370 KFAIGVMKKDGSQERL----LVEDSNLQAP-------TWSPSGRSLIFSRK 409
              I  ++    ++ +    L E+ +   P        WS  G  ++ + +
Sbjct: 767 -LKIWDVESANEEKSIEVAKLFENEDESQPEVLLKCCAWSNDGSRIMVTTR 816



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 23/176 (13%), Positives = 55/176 (31%), Gaps = 19/176 (10%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---AS 308
            +   +  +    FS +G++            +     ++   E+L      +      +
Sbjct: 610 VVRPHKDAVFHACFSPDGRKFA---SCGADKTLQVFRSETG--EKLLELEAHDDEVLCCA 664

Query: 309 YSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +S D   +   S DR    ++ +  +      R+ ++         ++  G         
Sbjct: 665 FSADEKLLATCSADR----KVKIWNAKTGKPIRVYEEHTEQVNCCQFT-NGLSAPLLATC 719

Query: 368 GEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                I +   +   S+  L+     +    +SP  R L  S   DG    K++ +
Sbjct: 720 SNDCFIMLWDSETEYSRNTLIGHTGAVYHCRYSPDDRYLA-SSSMDGS--LKIWDV 772


>gi|88807222|ref|ZP_01122734.1| hypothetical protein WH7805_11763 [Synechococcus sp. WH 7805]
 gi|88788436|gb|EAR19591.1| hypothetical protein WH7805_11763 [Synechococcus sp. WH 7805]
          Length = 167

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 43/119 (36%), Gaps = 3/119 (2%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTK 365
            S S D S++   +D+ G+  + V         ++    +   +  P  S  G  +A   
Sbjct: 29  PSLSGDGSKLAVIADQRGRPTVQVRDLKSGQLLQLRHFSRHQPHSSPSLSWNGRYLAAVI 88

Query: 366 FSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             G +  + +  +   +     L    N    + +P GR L     + G    +++++ 
Sbjct: 89  QRGNRRLVLIEDRLTGRAHPLRLPAGRNPVNLSLAPDGRELAVQTAEQGRWQVEVFNLS 147



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 47/121 (38%), Gaps = 3/121 (2%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALI 274
           +P  S +  K+A    D      V + D +  +  + R  +      +P  S NG+    
Sbjct: 28  QPSLSGDGSKLA-VIADQRGRPTVQVRDLKSGQLLQLRHFSRHQPHSSPSLSWNGRYLAA 86

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +Q+     +   D  +     L      N ++ S +PD  ++  ++  +G+ Q+ V   
Sbjct: 87  VIQRGNRRLVLIEDRLTGRAHPLRLPAGRNPVNLSLAPDGRELAVQTAEQGRWQVEVFNL 146

Query: 334 N 334
           +
Sbjct: 147 S 147



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 37/121 (30%), Gaps = 5/121 (4%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            GD +   +   +     +    L    + G  ++    SR Q    P  S N + +A  
Sbjct: 32  SGDGSKLAVIADQRGRPTVQVRDL----KSGQLLQLRHFSRHQPHSSPSLSWNGRYLAAV 87

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                  L +          P R+   R+ +     + +G+   +   +     +   +L
Sbjct: 88  IQRGNRRLVLIEDRLTGRAHPLRLPAGRNPVNL-SLAPDGRELAVQTAEQGRWQVEVFNL 146

Query: 290 Q 290
            
Sbjct: 147 S 147


>gi|46137957|ref|XP_390669.1| hypothetical protein FG10493.1 [Gibberella zeae PH-1]
          Length = 492

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 10/125 (8%)

Query: 308 SYSPDSSQIV-FESDREGKEQLYVMQSNGSD--QKRISQDKEASYFDPVWSPQGDLIAFT 364
           + SPD   +  F SD        +   +      K     K+  Y    +S   + +A T
Sbjct: 77  NVSPDGRLLAGFSSD---GPSFVIWDISRRKFLWKLPMVVKQYHYHCIAFSSDSNFLA-T 132

Query: 365 KFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                   +  M+ DG   ++L   +++ L++ T+ P  R LI +   D  T + L+ I+
Sbjct: 133 SSDDGPIQLWDMR-DGKCFKILTLADNNRLESMTFHPDIRYLISTHTVDYRTKTWLWEIN 191

Query: 423 LNGRN 427
            +G+ 
Sbjct: 192 TDGKT 196


>gi|332828306|gb|EGK01018.1| hypothetical protein HMPREF9455_02807 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 719

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 63/180 (35%), Gaps = 17/180 (9%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATER 296
           VY   T+     K        +    +S + K   I+              D  S   + 
Sbjct: 250 VYNPATQQTVYLKTGTPKEKYLTNIAWSPDEKNIYIAEVNRGQDTCIVRSYDAASGKLQ- 308

Query: 297 LTNTLFINISASY----SP------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
              TLF  I   Y    +P      + S+ +++S+R+G   LY+  + G   K+I+  K 
Sbjct: 309 --TTLFTEIHPKYVEPENPVLFLKNEPSKFLWQSERDGFNHLYLYDTTGKLLKQITSGKW 366

Query: 347 ASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                  +  +G+ + +     S  +  I  +     +   L ++  +     S SG+ +
Sbjct: 367 DVTSVLGFDEKGENLFYVSTEVSPIEKHIYKLNLKTGKREQLSKEEGVHDGMLSASGKFI 426



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 59/177 (33%), Gaps = 26/177 (14%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVY----------LMDTRIDRAPKRIGNFRSM 259
           +++ L    +SP+++ +  A  +      +                 +  PK +     +
Sbjct: 267 KEKYLTNIAWSPDEKNIYIAEVNRGQDTCIVRSYDAASGKLQTTLFTEIHPKYVEPENPV 326

Query: 260 IL---APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQ 315
           +     P       + L   ++D    +Y  D      +++T+  +   S   +      
Sbjct: 327 LFLKNEPS------KFLWQSERDGFNHLYLYDTTGKLLKQITSGKWDVTSVLGFDEKGEN 380

Query: 316 IVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTKFSG 368
           + + S       + +Y +      ++++S  KE    D + S  G  I   +T  + 
Sbjct: 381 LFYVSTEVSPIEKHIYKLNLKTGKREQLS--KEEGVHDGMLSASGKFICDRYTSQNN 435


>gi|327351509|gb|EGE80366.1| hypothetical protein BDDG_03307 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 1024

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 90/246 (36%), Gaps = 37/246 (15%)

Query: 204 RYLTPSRDQILFEP--------RFSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRI 253
           R++  +R  I   P         F+P    V   +  +    I RV  + T      + +
Sbjct: 337 RFVLRNRQIIHTAPLQVYSSALAFAPESSVVKKQFKDHVPSWIRRVSGLLTDWGDTLQTL 396

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--FINISASYSP 311
            +    I    FSS+ K  L++ + +EA+ ++  D ++    +         + + +++ 
Sbjct: 397 DSNTGYIAKILFSSDNK--LLAAETNEAVILW--DAETGEQRQKFQHPPSSYDFAFAWNS 452

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           D   I   S       + +++ +     R +    E  +   ++SP   ++A    S   
Sbjct: 453 DLLAIAARSS------IQIIKPSTGMVLRELPAQSEERFVTVLFSPNDKVLA----SASP 502

Query: 371 FAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             I +   D  +    +E  +        +S  G  L F+ +   +   K++ +    R 
Sbjct: 503 HIIRLWDPDLGELLQTIETGDPPWHNHLCFSGDGSYLAFTLR---EREIKVWDV----RE 555

Query: 428 ETLINT 433
           + L+ T
Sbjct: 556 KRLLRT 561



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 81/293 (27%), Gaps = 46/293 (15%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA--------NIRYLTPSRDQILFEP 217
           IT   GD +    F   S+        L     DG         N++             
Sbjct: 703 ITKSSGDTDP---FPILSIALSKDVKLLAASQYDGGVAICDNLVNLKLFINGNWFSHLV- 758

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-----FSSNGKRA 272
            FS + + +   +  D+    V L D         +         PR     FS +GK  
Sbjct: 759 -FSEDNRFLTTFSQTDK---AVTLTDLSNGENELLLDLSHIEARYPRAMPCIFSEDGK-- 812

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYV 330
             ++  D    I   +L+   T +  +         +S D S +   + R G     + +
Sbjct: 813 AFALS-DYDDRICLCNLE-KKTTQFLHKPGTGTPCKFSDDGSLLASSTRRSGSPCDIIAL 870

Query: 331 MQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLV 387
              +     R I            +S    L+       +   + ++      E  ++  
Sbjct: 871 HDVSTGKHLRDIETRCLIRNGAIAFSKDNKLLVI----KDSHTVELLDIATGAEVGKVET 926

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           +    +    SP      FS  +       +        N T +  PA    P
Sbjct: 927 DTGFWEIGG-SPDD----FSSVEVKSGLLNI-------PNITTVTQPASERQP 967


>gi|239614495|gb|EEQ91482.1| NWD2 [Ajellomyces dermatitidis ER-3]
          Length = 1353

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 90/246 (36%), Gaps = 37/246 (15%)

Query: 204 RYLTPSRDQILFEP--------RFSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRI 253
           R++  +R  I   P         F+P    V   +  +    I RV  + T      + +
Sbjct: 651 RFVLRNRQIIHTAPLQVYSSALAFAPESSVVKKQFKDHVPSWIRRVSGLLTDWGDTLQTL 710

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--FINISASYSP 311
            +    I    FSS+ K  L++ + +EA+ ++  D ++    +         + + +++ 
Sbjct: 711 DSNTGYIAKILFSSDNK--LLAAETNEAVILW--DAETGEQRQKFQHPPSSYDFAFAWNS 766

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           D   I   S       + +++ +     R +    E  +   ++SP   ++A    S   
Sbjct: 767 DLLAIAARSS------IQIIKPSTGMVLRELPAQSEERFVTVLFSPNDKVLA----SASP 816

Query: 371 FAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             I +   D  +    +E  +        +S  G  L F+ +   +   K++ +    R 
Sbjct: 817 HIIRLWDPDLGELLQTIETGDPPWHNHLCFSGDGSYLAFTLR---EREIKVWDV----RE 869

Query: 428 ETLINT 433
           + L+ T
Sbjct: 870 KRLLRT 875



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 45/293 (15%), Positives = 81/293 (27%), Gaps = 46/293 (15%)

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA--------NIRYLTPSRDQILFEP 217
            IT   GD +    F   S+        L     DG         N++             
Sbjct: 1032 ITKSSGDTDP---FPILSIALSKDVKLLAASQYDGGVAICDNLVNLKLFINGNWFSHLV- 1087

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-----FSSNGKRA 272
             FS + + +   +  D+    V L D         +         PR     FS +GK  
Sbjct: 1088 -FSEDNRFLTTFSQTDK---AVTLTDLSNGENELLLDLSHIEARYPRAMPCIFSEDGK-- 1141

Query: 273  LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYV 330
              ++  D    I   +L+   T +  +         +S D S +   + R G     + +
Sbjct: 1142 AFALS-DYDDRICLCNLE-KKTTQFLHKPGTGTPCKFSDDGSLLASSTRRSGSPCDIIAL 1199

Query: 331  MQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLV 387
               +     R I            +S    L+       +   + ++      E  ++  
Sbjct: 1200 HDVSTGKHLRDIETRCLIRNGAIAFSKDNKLLVI----KDSHTVELLDIATGAEVGKVET 1255

Query: 388  EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            +    +    SP      FS  +       +        N T +  PA    P
Sbjct: 1256 DTGFWEIGG-SPDD----FSSVEVESGLLNI-------PNITTVTQPASERQP 1296



 Score = 40.0 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 93/290 (32%), Gaps = 33/290 (11%)

Query: 136 RKQIIGKKFFSSPASW-RKIAHTISD--DIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
              ++ K+F     SW R+++  ++D  D  Q++    G     +      +++     +
Sbjct: 677 ESSVVKKQFKDHVPSWIRRVSGLLTDWGDTLQTLDSNTGYIAKILFSSDNKLLAAETNEA 736

Query: 193 LCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           + + D   G   +          F   ++ +   +A           + ++        +
Sbjct: 737 VILWDAETGEQRQKFQHPPSSYDFAFAWNSDLLAIA-------ARSSIQIIKPSTGMVLR 789

Query: 252 RI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            +        +   FS N K  +++      + ++  DL        T     +    +S
Sbjct: 790 ELPAQSEERFVTVLFSPNDK--VLASASPHIIRLWDPDLGELLQTIETGDPPWHNHLCFS 847

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK----- 365
            D S + F        ++ V         R     +    +  +S  GD+++ ++     
Sbjct: 848 GDGSYLAFTLRE---REIKVWDVREKRLLRTFTGHKHRVRNFSFSHSGDIVSMSEDVIKI 904

Query: 366 -FSGEKFAIGVMKKDGSQERLLVEDSN-----LQAPTW-----SPSGRSL 404
                + A+   +  G    +    +N       +P+W     S +G+ L
Sbjct: 905 WNPSTEEALHSFEDHGGLATVTAFSANRKLFAHCSPSWILIRESSNGKVL 954


>gi|261196015|ref|XP_002624411.1| NWD2 [Ajellomyces dermatitidis SLH14081]
 gi|239587544|gb|EEQ70187.1| NWD2 [Ajellomyces dermatitidis SLH14081]
          Length = 1293

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 90/246 (36%), Gaps = 37/246 (15%)

Query: 204 RYLTPSRDQILFEP--------RFSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRI 253
           R++  +R  I   P         F+P    V   +  +    I RV  + T      + +
Sbjct: 646 RFVLRNRQIIHTAPLQVYSSALAFAPESSVVKKQFKDHVPSWIRRVSGLLTDWGDTLQTL 705

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--FINISASYSP 311
            +    I    FSS+ K  L++ + +EA+ ++  D ++    +         + + +++ 
Sbjct: 706 DSNTGYIAKILFSSDNK--LLAAETNEAVILW--DAETGEQRQKFQHPPSSYDFAFAWNS 761

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           D   I   S       + +++ +     R +    E  +   ++SP   ++A    S   
Sbjct: 762 DLLAIAARSS------IQIIKPSTGMVLRELPAQSEERFVTVLFSPNDKVLA----SASP 811

Query: 371 FAIGVMKKDGSQERLLVEDSN---LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             I +   D  +    +E  +        +S  G  L F+ +   +   K++ +    R 
Sbjct: 812 HIIRLWDPDLGELLQTIETGDPPWHNHLCFSGDGSYLAFTLR---EREIKVWDV----RE 864

Query: 428 ETLINT 433
           + L+ T
Sbjct: 865 KRLLRT 870



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 51/331 (15%), Positives = 109/331 (32%), Gaps = 35/331 (10%)

Query: 119  EGKDRLRV------EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
             G            E ++WDV++++ +  + F       R  + + S DI          
Sbjct: 842  SGDGSYLAFTLREREIKVWDVREKRLL--RTFTGHKHRVRNFSFSHSGDIVSMSEDVIKI 899

Query: 173  FN--SRILFVSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYA 229
            +N  +     S     G+   +    +  G+  I ++      I+     S + + +  A
Sbjct: 900  WNPSTEEALHSFEDHGGLATVTAFSANHLGSGSISHVLTGHKGIVASIALSGDTKLLGSA 959

Query: 230  TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SV 287
            + D      V L D  I ++      F  + +A   S + K    + Q D  + I    V
Sbjct: 960  SMD----YTVRLWDLNITKSSGDTDPFPILSIA--LSKDVKLLA-ASQYDGGVAICDNLV 1012

Query: 288  DLQ----SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            +L+     N    L  +       ++S     +       G+ +L ++  +  + +    
Sbjct: 1013 NLKLFINGNWFSHLVFSEDNRFLTTFSQTDKAVTLTDLSNGENEL-LLDLSHIEAR---- 1067

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                     ++S  G   A + +      I +   +    + L +        +S  G  
Sbjct: 1068 --YPRAMPCIFSEDGKAFALSDYDD---RICLCNLEKKTTQFLHKPGTGTPCKFSDDGSL 1122

Query: 404  LIFSRKKDGDTGSKLYSIDL-NGRNETLINT 433
            L  S ++ G     +   D+  G++   I T
Sbjct: 1123 LASSTRRSGSPCDIIALHDVSTGKHLRDIET 1153


>gi|256393476|ref|YP_003115040.1| phosphoesterase [Catenulispora acidiphila DSM 44928]
 gi|256359702|gb|ACU73199.1| phosphoesterase [Catenulispora acidiphila DSM 44928]
          Length = 921

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 68/200 (34%), Gaps = 33/200 (16%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V   D  I+    R+   +  I+    S +G     ++  D    +  +DL+S   +++
Sbjct: 63  EVIASDQYINPIGSRLVVNQGKIMGATVSPDGTHVAATIT-DGTGAMVIIDLRSYQVQQV 121

Query: 298 TNTLFI------------NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI---- 341
                               S +YSPD    V+     G  + + ++ +G+    +    
Sbjct: 122 IGKAATGVNLAISGNDVGQTSPTYSPDGKS-VWVGRANGYTK-FTVKPDGTLATPVDVAI 179

Query: 342 --SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
             +   +A     V+S  G  + +   +G+   + +    G+  +             +P
Sbjct: 180 PAAGSAQALSGKAVFSADGATV-YGAVNGQNRVVAMDAATGAITQSWTTG-------IAP 231

Query: 400 SGRSLI----FSRKKDGDTG 415
            G +L+    +   + G T 
Sbjct: 232 RGMALVNGKLYVSNEGGRTA 251


>gi|254524585|ref|ZP_05136640.1| WD-40-like beta propeller repeat-containing protein
           [Stenotrophomonas sp. SKA14]
 gi|219722176|gb|EED40701.1| WD-40-like beta propeller repeat-containing protein
           [Stenotrophomonas sp. SKA14]
          Length = 287

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 57/163 (34%), Gaps = 17/163 (10%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLY---VMQSNGSDQKRISQDKEASYFDPVWS 355
           +T      A+ S D  +IVF    E    L+   V+       + +         DP +S
Sbjct: 36  STRADEGRATISADGQRIVFARRGEAGWGLWEARVVDGRWQQAQPLPVGVAGEARDPYFS 95

Query: 356 PQGDLIAFTKFSGEKFAIGVMKK--DG--SQERLLVEDSNLQA---PTWSPSGRSLIFSR 408
             G  + F        A+       DG     + L  D   +    P  S  G+ L+F+R
Sbjct: 96  GDGRWLLFAAGREGALALYRAALAADGRLGSAQALAGDGGRREERGPALSADGQRLLFAR 155

Query: 409 KKDGDTGSKLYSIDLNGRNET-------LINTPAYASDPQWVG 444
           ++    G  L+   L+ +           +N+    +D  W+G
Sbjct: 156 QQGRGAGWDLFVAPLDAQGVRGPATALTALNSAEDETDGDWLG 198



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 59/193 (30%), Gaps = 17/193 (8%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            RI+F +    +G       V+D      + L         +P FS + + + +A   + 
Sbjct: 51  QRIVF-ARRGEAGWGLWEARVVDGRWQQAQPLPVGVAGEARDPYFSGDGRWLLFAAGREG 109

Query: 235 DILRVYLMDTRIDRAPKRIG----NFRSMILAPRFSSNGKRALISVQ--KDEAMDIYSVD 288
            +           R            R     P  S++G+R L + Q  +    D++   
Sbjct: 110 ALALYRAALAADGRLGSAQALAGDGGRREERGPALSADGQRLLFARQQGRGAGWDLFVAP 169

Query: 289 LQS----NATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLY----VMQSNGSDQ 338
           L +         LT  N+        +      +VF    +   Q++             
Sbjct: 170 LDAQGVRGPATALTALNSAEDETDGDWLGHDGAVVFSRGSDATAQVWSSGCAWSGVALQP 229

Query: 339 KRISQDKEASYFD 351
            R+S ++   +  
Sbjct: 230 LRLSFNQAGGWTA 242



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 55/173 (31%), Gaps = 17/173 (9%)

Query: 218 RFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             S + Q++ +A   +    +    ++D R  +A             P FS +G+  L +
Sbjct: 45  TISADGQRIVFARRGEAGWGLWEARVVDGRWQQAQPLPVGVAGEARDPYFSGDGRWLLFA 104

Query: 276 VQKDE----AMDIYSVDLQSNATERLTNTLF--INISASYSPDSSQIVFESD--REGKEQ 327
             ++          + D +  + + L            + S D  +++F     R     
Sbjct: 105 AGREGALALYRAALAADGRLGSAQALAGDGGRREERGPALSADGQRLLFARQQGRGAGWD 164

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL------IAFTKFSGEKFAIG 374
           L+V   +    +  +    A       +  GD       + F++ S     + 
Sbjct: 165 LFVAPLDAQGVRGPATALTALNSAEDET-DGDWLGHDGAVVFSRGSDATAQVW 216


>gi|115768161|ref|XP_780473.2| PREDICTED: similar to TAF5 protein [Strongylocentrotus purpuratus]
 gi|115967931|ref|XP_001184856.1| PREDICTED: similar to TAF5 protein [Strongylocentrotus purpuratus]
          Length = 676

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 81/217 (37%), Gaps = 20/217 (9%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD   A  + +       ++   FSP+++ +  ++ D    ++++ M T       R 
Sbjct: 405 RIMDDSTATDQRILLGHSGPVYSTSFSPDRKFLLSSSED--STIKLWSMHTYSSLVAYRG 462

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPD 312
            NF   +   +F   G     S  KD    +++   + +   R+      ++    + P+
Sbjct: 463 HNFP--VWDVQFGPFGHYFA-SASKDRTARLWA--TEYHQPLRIFAGHLSDVETVRFHPN 517

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S+ I   S     + + +   N     R+    +    + ++SP G  +A    +GE   
Sbjct: 518 SNYIATGSS---DKTIRLWDMNNGKCVRVMTGHKGPIRNIIFSPNGHYMA---STGEDKR 571

Query: 373 IGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI 405
           + + +       L+ E ++   P    ++   G  L 
Sbjct: 572 VLLWELRHGN--LIRELNDHTEPIYSLSFCQDGNVLA 606


>gi|92870973|gb|ABE80134.1| WD40-like [Medicago truncatula]
          Length = 611

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 77/238 (32%), Gaps = 41/238 (17%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR-IDRAPKRIGNFRSMILAP 263
            +           RFSPN + VA  + D    +R++      + +   R+ + R   L  
Sbjct: 53  SVYGEHAYPATVARFSPNGEWVA--SADVSGTVRIWGTRNEFVLKKEFRVLSGRIDDL-- 108

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI------SASYSPDSSQIV 317
           ++S +G R + S +      + +    S      TN    +       S +Y P     +
Sbjct: 109 QWSPDGIRIVASGEAKGNSFVRAFMWDSG-----TNVGEFDGHSRRVLSCAYKPTRPFRI 163

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLIAFTKFSGEKF--- 371
                +     +++        R  Q   D         +SP G          +     
Sbjct: 164 VTCGED-----FLVNFYEGPPFRFKQSHRDHSNFVNCVRYSPDGSKFVTVSSDKKGIIFD 218

Query: 372 -----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 IG +  +G          ++ A +WSP G+ ++       D  +K++ I  +
Sbjct: 219 GKTGEKIGELSSEGG------HTGSIYAVSWSPDGKQVL---TVSADKSAKVWDISED 267



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 4/93 (4%)

Query: 198 RDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            +G   R+    RD   F    R+SP+  K    + D + I+       +I       G 
Sbjct: 175 YEGPPFRFKQSHRDHSNFVNCVRYSPDGSKFVTVSSDKKGIIFDGKTGEKIGELSSE-GG 233

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
               I A  +S +GK+ L +V  D++  ++ + 
Sbjct: 234 HTGSIYAVSWSPDGKQVL-TVSADKSAKVWDIS 265


>gi|117921500|ref|YP_870692.1| glutamyl peptidase [Shewanella sp. ANA-3]
 gi|117613832|gb|ABK49286.1| glutamyl peptidase. Serine peptidase. MEROPS family S09D
           [Shewanella sp. ANA-3]
          Length = 802

 Score = 50.8 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/230 (13%), Positives = 77/230 (33%), Gaps = 27/230 (11%)

Query: 223 QQKVAYATYDDEDILRVYLMD--TRIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQK 278
             ++A   Y    I + Y       I    +R+ +      I   +FS + +        
Sbjct: 77  GLRIAAEQYLPSRITQRYHQLKLISIQDNRQRLISLPGGHDITELQFSPDSRYLSYVSLT 136

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSS---QIVFESDREGKEQLYVMQ 332
            E   +Y  D+  N  +RL++            ++ ++S   + V  S+        +  
Sbjct: 137 PEGGYLYVYDIAQNRHKRLSDNRLNGTISLDYQWANNNSLLARFVIASNTNASMAPTLYA 196

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
               +       +         S       F++ +  +  + ++  DG +   +      
Sbjct: 197 PKTKETSGKQSPQRTYQDLLKTSADKQR--FSQLTTSQ--LALVDMDG-KLTNIAAPGIF 251

Query: 393 QAPTWSPSGRSLI-------FSR---KKDGDTGSKLYSIDLNGRNETLIN 432
           +  + SP G+ ++       FS      D    +++Y  +L+G+  T ++
Sbjct: 252 EDFSLSPDGQYILTHQLTTPFSTQVKYYDFPILTEIY--NLDGQRITQLH 299


>gi|325093680|gb|EGC46990.1| periodic tryptophan protein [Ajellomyces capsulatus H88]
          Length = 929

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 86/242 (35%), Gaps = 27/242 (11%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K SL V+    +NI ++T +              + +A+ +     +L V+   +     
Sbjct: 301 KLSLTVISVSQSNIDFVTMNNS-----------GEWIAFGSSKLGQLL-VWEWQSE-SYI 347

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K+ G+  SM     +S +G++  I+   D  + ++  +         T       +  +
Sbjct: 348 LKQQGHLDSMNSL-VYSPDGQKI-ITAADDGRIKVWDTN-SGFCIVTFTEHTSGVTACQF 404

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S   + ++F +  +G  + + +     + +  +      +      P G+++        
Sbjct: 405 SKKGN-VLFTASLDGSIRAWDL-IRYRNFRTYTAPSRLGFSCLAVDPSGEVVCAGSLD-- 460

Query: 370 KFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            F + +      Q   RL      + + +++  GR L+      G     +    + GR 
Sbjct: 461 SFDVHIWSVQTGQLLDRLAGHQGPVSSLSFAADGRHLV-----SGSWDHTIRIWSIFGRT 515

Query: 428 ET 429
           +T
Sbjct: 516 QT 517



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 60/190 (31%), Gaps = 8/190 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ QK+  A  D     R+ + DT             S + A +FS  G   L +   
Sbjct: 362 YSPDGQKIITAADDG----RIKVWDTNSGFCIVTFTEHTSGVTACQFSKKGN-VLFTASL 416

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++       T    +  S   + D S  V  +       +++        
Sbjct: 417 DGSIRAWDL-IRYRNFRTYTAPSRLGFS-CLAVDPSGEVVCAGSLDSFDVHIWSVQTGQL 474

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                  +       ++  G  +    +      I  +         L   ++L +  + 
Sbjct: 475 LDRLAGHQGPVSSLSFAADGRHLVSGSWDHT-IRIWSIFGRTQTSEPLELQADLLSVAFR 533

Query: 399 PSGRSLIFSR 408
           P G+ +  S 
Sbjct: 534 PDGKQIAASS 543


>gi|317503576|ref|ZP_07961598.1| dipeptidyl peptidase IV [Prevotella salivae DSM 15606]
 gi|315665318|gb|EFV04963.1| dipeptidyl peptidase IV [Prevotella salivae DSM 15606]
          Length = 725

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/274 (12%), Positives = 88/274 (32%), Gaps = 34/274 (12%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDDED 235
             N L V+D  G + +  T    +I++                ++ +  ++A+   D   
Sbjct: 151 KDNQLHVIDAHGNDHQLTTDGSREIVYGQSVHRNEFGITGGLFWNHDGTRLAFYRMDQ-- 208

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              +     ++D                +   +  +  ++ +    + +   DL +N   
Sbjct: 209 --SIVSDYPQVDIPELDWKPSNGQSRMAKADPD--KYPMAGETIHKVTVGVFDLATNKIT 264

Query: 296 RLTNTLFINI---SASYSPDSSQIV-FESDREGKEQLYVMQSN---GSDQKRISQDKEAS 348
            L      +    + S++PD+  +  FE +R+ +    +M  N   G     I  + ++ 
Sbjct: 265 YLAAGDPTDRYFSNISWAPDNKTLYMFELNRD-QNDCRLMSYNTITGQPIAEIYHETDSK 323

Query: 349 YFDPV-----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSG 401
           Y +P+          +             + +  K+G   R L +   +      +    
Sbjct: 324 YVEPLHPITFIPWDNNKFILWSQKDGYMHLYLYNKEGKALRQLTKGKYVVLDLLGFDTKN 383

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           + +             L++ID     +TL++   
Sbjct: 384 KRIFIESNACSPIQKNLFAIDFASGKQTLLDVNG 417



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 64/183 (34%), Gaps = 12/183 (6%)

Query: 211 DQILFEPRFSPNQQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGN-FRSMILAP----R 264
           D+      ++P+ + +  +    D++  R+   +T   +    I +   S  + P     
Sbjct: 273 DRYFSNISWAPDNKTLYMFELNRDQNDCRLMSYNTITGQPIAEIYHETDSKYVEPLHPIT 332

Query: 265 FSS-NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           F   +  + ++  QKD  M +Y  + +  A  +LT   ++ +        ++ +F     
Sbjct: 333 FIPWDNNKFILWSQKDGYMHLYLYNKEGKALRQLTKGKYVVLDLLGFDTKNKRIFIESNA 392

Query: 324 GKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKD 379
                  L+ +      Q  +  + +  +     S  G+ I     + +    I ++   
Sbjct: 393 CSPIQKNLFAIDFASGKQTLLDVNGKG-WHSGSLSKSGNYIVDNYQTPDIPRNIAIVNTT 451

Query: 380 GSQ 382
             +
Sbjct: 452 NGK 454


>gi|29144967|gb|AAH49117.1| WD repeat domain 1 [Mus musculus]
          Length = 658

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 87/314 (27%), Gaps = 55/314 (17%)

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            + + G         W ++ + I          E+G                     + +
Sbjct: 40  ARPLRGSTRAQRRNKWARMPYEIKKVFASLPQVERGVSKILGGDPKGDHFLYTNGKCVIL 99

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            + D   I  +       +   +++P+   +A  + D    LR++    +          
Sbjct: 100 RNIDNPAIADIYTEHAHQVVVAKYAPSGFYIA--SGDISGKLRIWDTTQKEHLLKYEYQP 157

Query: 256 FRSMILAPRFSSNGKRALISVQK--------------------DEAMDIYSVDLQSNATE 295
           F   I    ++ + KR  +  +                          I SVD++     
Sbjct: 158 FAGKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDTGSSVGEITGHNKVINSVDIKQTRPY 217

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           RL      N +A +             EG    +              D         +S
Sbjct: 218 RLATGSDDNCAAFF-------------EGPPFKFKFTIG---------DHSRFVNCVRFS 255

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKK 410
           P G+  A     G    I +      ++          D  + A +WSP    L+     
Sbjct: 256 PDGNRFATASADG---QIFIYDGKTGEKVCALGESKAHDGGIYAISWSPDSTHLL---SA 309

Query: 411 DGDTGSKLYSIDLN 424
            GD  SK++ +++N
Sbjct: 310 SGDKTSKIWDVNVN 323


>gi|297671157|ref|XP_002813711.1| PREDICTED: WD repeat-containing protein 51A-like isoform 2 [Pongo
           abelii]
          Length = 359

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 84/233 (36%), Gaps = 18/233 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 31  TKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRD--KTVRIW 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+   ++   D+ + +++   Q      L+  
Sbjct: 89  VPNVKGESTAFR--AHTATVRSVHFCSDGQS-FVTASDDKTIKVWATHRQ-KFLFSLSQH 144

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +   +  +      +         + P G  
Sbjct: 145 INWVRCAKFSPDGRLIVSASD---DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTC 201

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
           IA            V        RLL    +  + +   ++ PSG  LI +  
Sbjct: 202 IAAAGMDNTVKVWDV-----RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 249



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 66/225 (29%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +         +    +    F  + Q    A+ D      + +  T 
Sbjct: 78  SGSRDKTVRIWVPNVKGESTAFRAHTATVRSVHFCSDGQSFVTASDDK----TIKVWATH 133

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             +    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 134 RQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKSSRECVHSYCEHGGFV 190

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + I           + V         +  Q   A+     + P G+ +   
Sbjct: 191 TYVDFHPSGTCIAAAGM---DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITA 247

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 248 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 282


>gi|297671155|ref|XP_002813710.1| PREDICTED: WD repeat-containing protein 51A-like isoform 1 [Pongo
           abelii]
          Length = 407

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 84/233 (36%), Gaps = 18/233 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 31  TKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRD--KTVRIW 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+   ++   D+ + +++   Q      L+  
Sbjct: 89  VPNVKGESTAFR--AHTATVRSVHFCSDGQS-FVTASDDKTIKVWATHRQ-KFLFSLSQH 144

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +   +  +      +         + P G  
Sbjct: 145 INWVRCAKFSPDGRLIVSASD---DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTC 201

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
           IA            V        RLL    +  + +   ++ PSG  LI +  
Sbjct: 202 IAAAGMDNTVKVWDV-----RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 249



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 66/225 (29%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +         +    +    F  + Q    A+ D      + +  T 
Sbjct: 78  SGSRDKTVRIWVPNVKGESTAFRAHTATVRSVHFCSDGQSFVTASDDK----TIKVWATH 133

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             +    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 134 RQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKSSRECVHSYCEHGGFV 190

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + I           + V         +  Q   A+     + P G+ +   
Sbjct: 191 TYVDFHPSGTCIAAAGM---DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITA 247

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 248 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 282


>gi|297794175|ref|XP_002864972.1| hypothetical protein ARALYDRAFT_919910 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310807|gb|EFH41231.1| hypothetical protein ARALYDRAFT_919910 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 257

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 78/208 (37%), Gaps = 17/208 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAP 263
                    +   +FS + + +A A+ D    +R Y +D    D   K +  F       
Sbjct: 17  QTLNFHSHAVSSVKFSTDGRLLASASGD--KTIRTYAIDIAQEDSIAKPVHEFSGHDNGV 74

Query: 264 ---RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
               FSS+ +    S   D+ + ++  D+++ +  + L         A+++P S+ IV  
Sbjct: 75  SDIAFSSDARFLA-SASDDKTLKLW--DVETGSVIKTLIGHSNYVFCANFNPQSNMIVSG 131

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         ++            ++  G LI  + + G    I      
Sbjct: 132 SF---DETVRIWDVKSGKCLKVLPAHSVPVTCVDFNRDGSLIVSSSYDG-LCRIW-DSGT 186

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLI 405
           G   + L++D N  +    +SP+G+ ++
Sbjct: 187 GHYVKTLIDDENPPVSFVKFSPNGKFIL 214



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 66/186 (35%), Gaps = 11/186 (5%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           L  S S    I   ++ +   D  A   +     D  + +  FS + + +A A+ D    
Sbjct: 37  LLASASGDKTIRTYAIDIAQEDSIAKPVHEFSGHDNGVSDIAFSSDARFLASASDDK--- 93

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TE 295
             + L D       K +    + +    F+      + S   DE + I+  D++S    +
Sbjct: 94  -TLKLWDVETGSVIKTLIGHSNYVFCANFNPQSNMIV-SGSFDETVRIW--DVKSGKCLK 149

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L           ++ D S IV  S  +G  +++     G   K +  D+        +S
Sbjct: 150 VLPAHSVPVTCVDFNRDGSLIV-SSSYDGLCRIWD-SGTGHYVKTLIDDENPPVSFVKFS 207

Query: 356 PQGDLI 361
           P G  I
Sbjct: 208 PNGKFI 213


>gi|295133856|ref|YP_003584532.1| hypothetical protein ZPR_2011 [Zunongwangia profunda SM-A87]
 gi|294981871|gb|ADF52336.1| conserved hypothetical protein [Zunongwangia profunda SM-A87]
          Length = 391

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 76/245 (31%), Gaps = 25/245 (10%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR----SMILAPRFSSNGKRALISVQKD 279
            K A+ +     ++ +Y +         +  +      S   +   S++ K   I     
Sbjct: 149 NKFAFVSNYMGGVVVMYRIQQDGSLEKHQQLDMPNPKESHTHSVSISADNKHVYICDLGA 208

Query: 280 EAMDIYSVDLQSNATER-------LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           + + IY  D +    E+       L          ++S D       ++      ++ ++
Sbjct: 209 DKIWIYDFDAKGKTLEKNQQESVSLPEGSGP-RHFTFSKDQKFAYSMNELNSTISIFKVE 267

Query: 333 SNGS-------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQER 384
            NG                +  S  D   SP GD +  +       AI  +  K G  E 
Sbjct: 268 ENGGLNLQNSVSSIPEDFTENNSGADIHISPSGDYLYASNRGHNTIAIFKIDKKSGGLEN 327

Query: 385 LLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                +N + P     S  GR +  + +  G+  +  Y ++        I  P     P 
Sbjct: 328 KGYASTNGKTPRNFAISEDGRYIYAANQDSGNIQA--YKVNSATGELDAIGKPTAVPTPV 385

Query: 442 WVGFM 446
            + F+
Sbjct: 386 CIEFL 390


>gi|260642784|ref|ZP_05417304.2| dipeptidyl-peptidase IV [Bacteroides finegoldii DSM 17565]
 gi|260620605|gb|EEX43476.1| dipeptidyl-peptidase IV [Bacteroides finegoldii DSM 17565]
          Length = 753

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 65/186 (34%), Gaps = 45/186 (24%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-------MILAPRFSSNGKRA 272
            P+ +   + T  ++D  ++     +     + I + ++          + +FS +GK+ 
Sbjct: 63  MPDGE---HYTQMNDDGTQIIKYSFKTGEKVEVIFDVKTARECDFKHFDSYQFSPDGKKL 119

Query: 273 LIS------VQKDEAMDIYSVDLQ--------SNATERLTNTLFINISASYSPDSSQIVF 318
           LI+       +       Y   L+        +N  ERL++         +SPD + I F
Sbjct: 120 LIATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDG-GPQQVPVFSPDGTMIAF 178

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEAS---YFDPVW--------------SPQGDLI 361
             D        V    G+ + ++++D + +      P W              S     I
Sbjct: 179 VRD---NNIFLVKLLYGNSESQVTEDGKQNSIINGIPDWVYEEEFSFNRALEFSADNTQI 235

Query: 362 AFTKFS 367
           A+ +F 
Sbjct: 236 AYIRFD 241



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 49/161 (30%), Gaps = 33/161 (20%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-------YFDPVWSPQGDLI- 361
            PD     +    +   Q+        ++  +  D + +       +    +SP G  + 
Sbjct: 63  MPDGEH--YTQMNDDGTQIIKYSFKTGEKVEVIFDVKTARECDFKHFDSYQFSPDGKKLL 120

Query: 362 -------AFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSR 408
                   +         I  +K++            L +    Q P +SP G  + F R
Sbjct: 121 IATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQVPVFSPDGTMIAFVR 180

Query: 409 KKDGDTGSKLY-----SIDLNGRNETLINTPAYASDPQWVG 444
             +      LY      +  +G+  ++IN       P WV 
Sbjct: 181 DNNIFLVKLLYGNSESQVTEDGKQNSIIN-----GIPDWVY 216



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 54/395 (13%), Positives = 121/395 (30%), Gaps = 87/395 (22%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F   +                +   N  G Q++   +   +  +++ V   
Sbjct: 43  DLKDITSGHFRPENIQGVIPMPDGE----HYTQMNDDGTQII---KYSFKTGEKVEV--- 92

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DVK  ++   K    +  SP   + +  T +  IY+             ++  +    
Sbjct: 93  IFDVKTARECDFKHFDSYQFSPDGKKLLIATKTTPIYRHSYT-----AVHYIYPLKRNDK 147

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   +A+   ++     ++L+    
Sbjct: 148 GVTTNNIIERLSDGGPQQV-----------PVFSPDGTMIAFVRDNN-----IFLVKLLY 191

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +  ++                      S   A  FS++  +       + A+  YS  
Sbjct: 192 GNSESQVTEDGKQNSIINGIPDWVYEEEFSFNRALEFSADNTQIAYIRFDESAVPSYSFP 251

Query: 289 LQSNATERLTNTLFINISASY------SPDSSQIVFESD-REGKEQLYVMQSN-GSDQKR 340
           + +     +          +Y       P+S   V   D +    +   +  +      R
Sbjct: 252 VFAGQAPHINALKDYPGEYTYKYPKAGYPNSKVEVRTYDIKSHVTRTMKLPLDPDGYIPR 311

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---- 396
           I   K+A+            I       ++F +       +  +L++ D   ++P     
Sbjct: 312 IRFTKDANKLA---------IMTLNRHQDRFDLYFADPRSTLCKLVLRD---ESPYYIKE 359

Query: 397 -------WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  + P         ++DG +    YS+  N
Sbjct: 360 NIFDNIEFYP--EYFSLLSERDGYSHLYWYSMGGN 392


>gi|241628882|ref|XP_002408202.1| WD-repeat protein, putative [Ixodes scapularis]
 gi|215501145|gb|EEC10639.1| WD-repeat protein, putative [Ixodes scapularis]
          Length = 302

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 73/240 (30%), Gaps = 26/240 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S  + +++ + D +    +    +     +   FSP+ + +A  ++  +    + L    
Sbjct: 78  SSSLDSNIKLWDLETGEEKKSIDAGPVDAWSVTFSPDSRFLASGSHSGK----INLYGVE 133

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
             +    +       L+  FS +GK    S   D    I   D+ +      L       
Sbjct: 134 SCKLESSLDTTGKFTLSIAFSPDGKYIA-SGAIDGI--INVFDISTGKLVHTLEGHAMPI 190

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S ++SPDS  +V  SD      + V     +          +      +       A +
Sbjct: 191 RSLTFSPDSQMLVTASD---DCHIKVYDVQHAGLVTTLSGHGSWVLHVAFCSDNAHFASS 247

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                   + V    G +      + + Q   W            K    GS+L S+  +
Sbjct: 248 SSDRT---VKVWDLAGKECVHTFSEHSDQ--VWC----------TKYNHNGSRLVSVSED 292



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 69/254 (27%), Gaps = 25/254 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
               + D   + ++       +     S +    A ++ D      + L D       K 
Sbjct: 43  CWKWNEDSLELLHVLEGHALGVVSVDISHDGDVAASSSLDS----NIKLWDLETGEEKKS 98

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I        +  FS + +    S      +++Y V+        L  T    +S ++SPD
Sbjct: 99  IDAGPVDAWSVTFSPDSRFLA-SGSHSGKINLYGVE-SCKLESSLDTTGKFTLSIAFSPD 156

Query: 313 SSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
              I       G     + V   +        +          +SP   ++       + 
Sbjct: 157 GKYIA-----SGAIDGIINVFDISTGKLVHTLEGHAMPIRSLTFSPDSQMLVTAS---DD 208

Query: 371 FAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             I V     +     +           +        F+      T       DL G+  
Sbjct: 209 CHIKVYDVQHAGLVTTLSGHGSWVLHVAFCSDNAH--FASSSSDRTVKVW---DLAGKE- 262

Query: 429 TLINTPAYASDPQW 442
             ++T +  SD  W
Sbjct: 263 -CVHTFSEHSDQVW 275


>gi|154493668|ref|ZP_02032988.1| hypothetical protein PARMER_03009 [Parabacteroides merdae ATCC
           43184]
 gi|154086878|gb|EDN85923.1| hypothetical protein PARMER_03009 [Parabacteroides merdae ATCC
           43184]
          Length = 1112

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 53/156 (33%), Gaps = 27/156 (17%)

Query: 268 NGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFES-DR 322
           +  R L S + K+    IY +++  +   +       ++    A+Y PD   +   +   
Sbjct: 195 DADRLLFSSLDKNRKWQIYEMNIDGSNLHQKITVDEPDLEFCDANYLPDGKVVATTNIGY 254

Query: 323 EGKE---------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            G            L          +R++ D++ ++   V  P G  I +T++       
Sbjct: 255 NGVPCVHGDDVVANLVSFDPETRALRRLTFDQDGNWSPIVI-PNGR-IMYTRWEYTDLTH 312

Query: 374 G------VMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                   M  DG++ + L         ++ P+   
Sbjct: 313 YFSRIVMHMNPDGTENKALYGSG-----SYFPNSTF 343



 Score = 46.2 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 57/142 (40%), Gaps = 19/142 (13%)

Query: 312 DSSQIVFES-DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPV-WSPQGDLIAFTKFSG 368
           D+ +++F S D+  K Q+Y M  +GS+  + I+ D+    F    + P G ++A T    
Sbjct: 195 DADRLLFSSLDKNRKWQIYEMNIDGSNLHQKITVDEPDLEFCDANYLPDGKVVATTNIGY 254

Query: 369 EKF----------AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTG-- 415
                         +     +    R L  +     +P   P+GR ++++R +  D    
Sbjct: 255 NGVPCVHGDDVVANLVSFDPETRALRRLTFDQDGNWSPIVIPNGR-IMYTRWEYTDLTHY 313

Query: 416 -SKLYS-IDLNGRNETLINTPA 435
            S++   ++ +G     +    
Sbjct: 314 FSRIVMHMNPDGTENKALYGSG 335



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 50/149 (33%), Gaps = 19/149 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILA-PRFSSNGKRALISVQK- 278
           +  ++ +++ D     ++Y M+       ++I  +   +      +  +GK    +    
Sbjct: 195 DADRLLFSSLDKNRKWQIYEMNIDGSNLHQKITVDEPDLEFCDANYLPDGKVVATTNIGY 254

Query: 279 ---------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
                    D   ++ S D ++ A  RLT     N S    P+   +    +       +
Sbjct: 255 NGVPCVHGDDVVANLVSFDPETRALRRLTFDQDGNWSPIVIPNGRIMYTRWEYTDLTHYF 314

Query: 330 -----VMQSNGSDQKRISQDKEASYFDPV 353
                 M  +G++ K +      SYF   
Sbjct: 315 SRIVMHMNPDGTENKALY--GSGSYFPNS 341


>gi|157104349|ref|XP_001648366.1| hypothetical protein AaeL_AAEL004055 [Aedes aegypti]
 gi|108880350|gb|EAT44575.1| conserved hypothetical protein [Aedes aegypti]
          Length = 479

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 69/201 (34%), Gaps = 17/201 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+ PN  KVA A  DD     + +        P      +  + +  +       L    
Sbjct: 160 RWHPNCFKVAIAASDD----SIRVYSDEPTIVPVLKSGLQKSVTSLAWRPYTAGELAVGC 215

Query: 278 KDEAMDIYSVDLQSNATERLTN-------TLFINISASYSPDSSQIVFESDREGKEQLYV 330
           ++  + +++VD  S  T  L+          F   S  +SP+   +   S  +    ++ 
Sbjct: 216 QNGTL-VWNVDPNSLITRPLSQAVQLRHGNHFPVTSVEWSPNGCLLATASINDSNVLIWD 274

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +  N     R      A      WSP G  +  T  S   F +    K     R  V   
Sbjct: 275 VDQNRQVPLRRVGPPCALL---SWSPTGSRLCSTTVSN-VFRVWQTDKWTPD-RWTVNHG 329

Query: 391 NLQAPTWSPSGRSLIFSRKKD 411
            +Q+  WS SG  L+F   +D
Sbjct: 330 TIQSVVWSKSGSHLLFVTTED 350



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 28/85 (32%), Gaps = 6/85 (7%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D D  N +              +SP   ++   +    ++ RV+  D      P R  
Sbjct: 272 IWDVD-QNRQVPLRRVGPPCALLSWSPTGSRL--CSTTVSNVFRVWQTDKWT---PDRWT 325

Query: 255 NFRSMILAPRFSSNGKRALISVQKD 279
                I +  +S +G   L    +D
Sbjct: 326 VNHGTIQSVVWSKSGSHLLFVTTED 350



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 47/119 (39%), Gaps = 7/119 (5%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L       +    +SPN   +A A+ +D ++L ++ +D       +R+G   +++    
Sbjct: 239 QLRHGNHFPVTSVEWSPNGCLLATASINDSNVL-IWDVDQNRQVPLRRVGPPCALL---S 294

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           +S  G R   S        ++  D  +   +R T       S  +S   S ++F +  +
Sbjct: 295 WSPTGSRLC-STTVSNVFRVWQTDKWT--PDRWTVNHGTIQSVVWSKSGSHLLFVTTED 350


>gi|19343738|gb|AAH25501.1| Achalasia, adrenocortical insufficiency, alacrimia [Mus musculus]
 gi|26353208|dbj|BAC40234.1| unnamed protein product [Mus musculus]
          Length = 546

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 71/198 (35%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  D  D +RVY  ++ I   P      +  + A  +       L    
Sbjct: 158 AWHPHTNKFAVALLD--DSIRVYNANSTI--VPSLKHRLQRNVAALAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P+   ++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPNGGWLLSASPVD--AVIL 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  +  T  S   F +   +    +       
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVLATTPS-AIFRVWEAQMWTCEAW-PTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 329 GRCQTGCWSPDGNRLLFT 346


>gi|82524123|emb|CAJ19152.1| hypothetical protein [unidentified microorganism]
          Length = 217

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 29/155 (18%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLM-------------DTRIDRAPKRIGNF 256
           +      P FSP+ + + +    +  I                      I    + + + 
Sbjct: 4   KGVWESFPAFSPDGRTLYFTAAREVQIPGELQQSQYNLLKVSFDPETGTIGPDVETVVDA 63

Query: 257 RSM---ILAPRFSSNGKRALISVQKDEAM-------DIYSVDLQSNATERL--TNTLFIN 304
            SM   +  P+ S +GK  + ++             D++ +DL++  T  L   N+   +
Sbjct: 64  ASMGKSLTFPKPSFDGKYLMYTLCDYGTFSIWHHESDLWLLDLETGETRPLDEVNSPDTD 123

Query: 305 ISASYSPDSSQIVFESDRE----GKEQLYVMQSNG 335
              ++S +S   VF S R+     +  +     NG
Sbjct: 124 SYHNWSSNSRWFVFSSRRDDGAYTRPYIAHFDENG 158



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 55/153 (35%), Gaps = 31/153 (20%)

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-------- 354
                ++SPD   + F + RE  +    +Q +  +  ++S D E     P          
Sbjct: 7   WESFPAFSPDGRTLYFTAARE-VQIPGELQQSQYNLLKVSFDPETGTIGPDVETVVDAAS 65

Query: 355 ----------SPQGDLIAFTKFSGEKFAI-------GVMKKDGSQERLLVEDSNLQAPT- 396
                     S  G  + +T      F+I        ++  +  + R L E ++    + 
Sbjct: 66  MGKSLTFPKPSFDGKYLMYTLCDYGTFSIWHHESDLWLLDLETGETRPLDEVNSPDTDSY 125

Query: 397 --WSPSGRSLIFSRKKDGDTGSKLYSI--DLNG 425
             WS + R  +FS ++D    ++ Y    D NG
Sbjct: 126 HNWSSNSRWFVFSSRRDDGAYTRPYIAHFDENG 158


>gi|326518474|dbj|BAJ88266.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326522723|dbj|BAJ88407.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1031

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +  F   I +  F+  G     +   D    I +VD  +  ++ L          ++ P 
Sbjct: 130 VARFTLPIRSLAFNKKGALLAAAGDDDGIKLIATVD--NTISKVLKGHKGSVTGLAFDPK 187

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDP-VWSPQGDLIAFTKF 366
           +  +    D  G    + +   GS+ + +     +   + S  +   WSP G  +A    
Sbjct: 188 NDYLA-SIDSFGTVIFWDLCL-GSEARSLSCVAPTFGSDHSVKNTLCWSPDGHTLAV--- 242

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI 405
            G +  + +  +D ++E +       + P     WSP+GR L 
Sbjct: 243 PGLRNNVVMYDRDTAEE-VFTLKGEHEQPICSLCWSPNGRYLA 284


>gi|325961765|ref|YP_004239671.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323467852|gb|ADX71537.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 694

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/241 (12%), Positives = 68/241 (28%), Gaps = 20/241 (8%)

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
            R +       + ++ T    D  +     ++ +     ++ L  +D    N   L    
Sbjct: 207 LRNLTPDAGPRLREAETAVSPDGRTVYASYTKPLAKADSRSVLVAVDAASGNTTVLLDHE 266

Query: 211 DQILFEPRFSPNQQKVAYATYD---DEDILRVYLMDTRIDRAP-------KRIGNFRSMI 260
               F    SP+ + +   +          +V L    +             + +     
Sbjct: 267 GMNYFPGPVSPDGKTLVVVSESDTTPHQAPQVKLHLLDVSADAADGLDALTPLAHDWDRW 326

Query: 261 LAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNAT----ERLTNTLFINISASYSPDSSQ 315
             P  +  +G   L++   D A  ++ + + ++A      R+T           SP+   
Sbjct: 327 AKPAAWLPDGSALLVTADDDGASPVFRISVPASAAEVSVTRVTQDASAYTDVVVSPEGRS 386

Query: 316 I-VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                S      +   +     +  R+    E   +        + IA T   G +    
Sbjct: 387 AYALRSSYSFPPEPVRIDLRSGETTRLPAPAERPAYPGRL----ERIAATAADGSRVPAY 442

Query: 375 V 375
           +
Sbjct: 443 L 443



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 44/142 (30%), Gaps = 24/142 (16%)

Query: 294 TERLTNTLFI---NISASYSPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQD 344
              LT            + SPD    V+ S        + +  L  + +   +   +   
Sbjct: 207 LRNLTPDAGPRLREAETAVSPDGRT-VYASYTKPLAKADSRSVLVAVDAASGNTTVLLDH 265

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMK-----KDG-SQERLLVEDSNL 392
           +  +YF    SP G  +     S        +  + ++       DG      L  D + 
Sbjct: 266 EGMNYFPGPVSPDGKTLVVVSESDTTPHQAPQVKLHLLDVSADAADGLDALTPLAHDWDR 325

Query: 393 QA--PTWSPSGRSLIFSRKKDG 412
            A    W P G +L+ +   DG
Sbjct: 326 WAKPAAWLPDGSALLVTADDDG 347



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 35/99 (35%), Gaps = 16/99 (16%)

Query: 264 RFSSNGKRALISVQ------KDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQI 316
             S +G R + +V        +    ++ +D        R+T +      A+++ +   +
Sbjct: 20  ALSPDGTRLVTTVATLNSKGTEFGTALWELDPAGQKQARRITRSAKGEAGAAFAANGD-V 78

Query: 317 VFES--------DREGKEQLYVMQSNGSDQKRISQDKEA 347
            F S        D +    L+++ + G + + +      
Sbjct: 79  YFTSARPDPESPDADPVNALWLLPAGGGEARVVLNRPGG 117


>gi|302560335|ref|ZP_07312677.1| lipoprotein LpqB [Streptomyces griseoflavus Tu4000]
 gi|302477953|gb|EFL41046.1| lipoprotein LpqB [Streptomyces griseoflavus Tu4000]
          Length = 616

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 84/245 (34%), Gaps = 35/245 (14%)

Query: 222 NQQKVAYATY--DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQK 278
           ++QK+   T   DD D   V       ++A + +   R    A     +G+   ++ +  
Sbjct: 350 DEQKLVRITSGTDDGDPHPVPGALGDGEQALRSVAVARDERTAAGVGIDGRSLFVAPLSA 409

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGS 336
             ++    +       E RLT         S+       ++ +DR     +LY+++ +  
Sbjct: 410 GSSLGEPVLRSTGKTEEDRLTT-------PSWDARGG--LWVADRNPAAPRLYLLEQDAG 460

Query: 337 DQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNL 392
           +  ++ +   +        +  G  IA     G++ ++ V + +   G Q  + V D   
Sbjct: 461 EPVQVRTPGLDGRVRAVRVAADGVRIALVVEKGDQRSLFVGRIEREAGEQPAVTVRDLRS 520

Query: 393 QAP--------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG---------RNETLINTPA 435
             P        +W+   R ++  R++ G    K   +D +               +  P 
Sbjct: 521 ATPELEQVTAMSWAGDSRLVVVGREEGGVEQMKYVEVDGSTPDVPPPAALTGVKAVTAPG 580

Query: 436 YASDP 440
               P
Sbjct: 581 DEQAP 585


>gi|289661701|ref|ZP_06483282.1| peptidase [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 779

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 59/396 (14%), Positives = 122/396 (30%), Gaps = 51/396 (12%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR 136
             F  +S D     +      P F       AQ L           RL  E   +  +  
Sbjct: 75  GGFAFVSAD-----VATLQKQPAFDQARV--AQGLSAATGKPYAALRLPFEQFSFSTEGE 127

Query: 137 KQIIGKKFFSSPASWR---KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
           +      F    A WR    I H   D   Q+ +  +G    R   V          ++ 
Sbjct: 128 RSDGAIVFALDDAPWRCTLTIYHCAPDARLQATSRPRGFGVVRDPLVPADTTPRRSPDAR 187

Query: 194 CVMDRDGANI-----------RYLTPSRDQILFE---PRFSPNQQKVAYATYDDEDILRV 239
             +  DG N+           R  +  R    F+     +SP+ +++A          RV
Sbjct: 188 WEVLADGWNLVLRHVADGQVTRLSSDGRADDYFDLESVAWSPDSRQLAVYRVRPGLARRV 247

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLT 298
             ++       + + + + +   P  + + +R  L ++  D  +     ++++     L 
Sbjct: 248 TRVEAAPAGGGQPVVHTQ-LYPKPGDAVDVERPVLFAL--DGTLR----NVETG----LF 296

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--------ISQDKEASYF 350
           +  +      +  D   + FE  + G +++ V+  +    +          +       F
Sbjct: 297 DNPYSLSPLQWRSDGRSVAFEYVQRGFQRMRVIAVDARTARAHVAVGEDAPTFVYADRSF 356

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSG--RSLIFS 407
                 +GD + +         + +   ++G  +R L     +           R + F+
Sbjct: 357 RHDVDGRGDEVLWISERDGWRHLYLFDGRNGKLKRQLTRGPWVVRDVLRVDDTQRRVWFT 416

Query: 408 RKK----DGDTGSKLYSIDLNGRNETLINTPAYASD 439
                        +LYS+D +GR  T +       D
Sbjct: 417 ASGMDAGKDPYYRQLYSVDFDGRRLTRLTHADADHD 452


>gi|170030890|ref|XP_001843320.1| WD repeat protein 61 [Culex quinquefasciatus]
 gi|167868800|gb|EDS32183.1| WD repeat protein 61 [Culex quinquefasciatus]
          Length = 326

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/190 (15%), Positives = 65/190 (34%), Gaps = 17/190 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           RV + D   D   K    F      +++   SS+G+    S   D  + ++  +      
Sbjct: 59  RVKVWDVTSDNKLKLRNTFTGHSLGVVSVDVSSDGEVIA-SSSLDSGLCVWKAE-TGQLL 116

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPV 353
            ++        + ++SP    I+  S      ++ +        +++   +   +     
Sbjct: 117 NQIALGPVDLWTVAFSPCDKYIISGSHEG---KISLYGVETGKAEQVLDPQNGKFTLSIA 173

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKD 411
           +SP G  IA     G    I +      +    +E   +   +  +SP  + L+ +    
Sbjct: 174 YSPDGKYIASGAIDG---IINIFDVAAGKVAQTLEGHAMSVRSLCFSPDSQMLLTASD-- 228

Query: 412 GDTGSKLYSI 421
            D   KLY +
Sbjct: 229 -DGHMKLYDV 237



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 60/181 (33%), Gaps = 10/181 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S   K SL  ++  G   + L P   +      +SP+ + +A    D      + + D 
Sbjct: 141 GSHEGKISLYGVE-TGKAEQVLDPQNGKFTLSIAYSPDGKYIASGAIDG----IINIFDV 195

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  + +      + +  FS +  + L++   D  M +Y V   S+    L+      
Sbjct: 196 AAGKVAQTLEGHAMSVRSLCFSPD-SQMLLTASDDGHMKLYDV-ANSDVVGTLSGHSSWV 253

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S S+S D       +     + + +             D +   +   +SP    +   
Sbjct: 254 LSVSFSGDGRS---FTSSSSDKSVKIWNVAERQCLHTFNDHQDQVWGVKYSPDSSKVISV 310

Query: 365 K 365
            
Sbjct: 311 S 311


>gi|315138995|ref|NP_001186706.1| POC1 centriolar protein homolog B isoform b [Homo sapiens]
 gi|119617831|gb|EAW97425.1| WD repeat domain 51B, isoform CRA_a [Homo sapiens]
          Length = 436

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 80/207 (38%), Gaps = 10/207 (4%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y       ++   +FSP+   +A A+ D    +R+++ D R   +  +       + +  
Sbjct: 12  YRYVGHKDVVTSVQFSPHGNLLASASRD--RTVRLWIPDKRGKFSEFKAHTAP--VRSVD 67

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS++G+    +  +D+++ ++S+  Q      L         A +SPD   IV  S+   
Sbjct: 68  FSADGQFLA-TASEDKSIKVWSMYRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSE--- 122

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +  +          D         ++P G  IA +  S +   +  ++ +   + 
Sbjct: 123 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIA-SAGSDQTVKVWDVRVNKLLQH 181

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             V    +   ++ PSG  LI +    
Sbjct: 182 YQVHSGGVNCISFHPSGNYLITASSDG 208



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 91/290 (31%), Gaps = 41/290 (14%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            F     ++R + H   D +        G            + S     ++ +   D   
Sbjct: 4   NFKPHARAYRYVGHK--DVVTSVQFSPHG----------NLLASASRDRTVRLWIPDKRG 51

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                 +    +    FS + Q +A A+ D      + +      R    +      +  
Sbjct: 52  KFSEFKAHTAPVRSVDFSADGQFLATASEDK----SIKVWSMYRQRFLYSLYRHTHWVRC 107

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQIVF 318
            +FS +G R ++S  +D+ + I+     +   ++  N    ++  +    ++P  + I  
Sbjct: 108 AKFSPDG-RLIVSCSEDKTIKIW----DTTN-KQCVNNFSDSVGFANFVDFNPSGTCIA- 160

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                  + + V     +   +  Q          + P G+ +      G    + ++  
Sbjct: 161 --SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYLITASSDGTLKILDLL-- 216

Query: 379 DGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              + RL+        P    ++S  G   +F+     DT   L+  + +
Sbjct: 217 ---EGRLIYTLQGHTGPVFTVSFSKGGE--LFASG-GADTQVLLWRTNFD 260


>gi|22761282|dbj|BAC11525.1| unnamed protein product [Homo sapiens]
          Length = 407

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 85/231 (36%), Gaps = 14/231 (6%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 31  TKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRD--KTVRIW 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+   ++   D+ + +++   Q      L+  
Sbjct: 89  VPNVKGESTVFR--AHTATVRSVHFCSDGQS-FVTASDDKTVKVWATHRQ-KFLFSLSQH 144

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +   +  +      +         + P G  
Sbjct: 145 INWVRCAKFSPDGRLIVSASD---DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTC 201

Query: 361 IAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           IA        + + +   +    Q   L   + +   ++ PSG  LI +  
Sbjct: 202 IAAAGMDNTVKVWDVRTYRL--LQHYQL-HSAAVNGLSFHPSGNYLITASS 249



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 67/225 (29%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +      +  +    +    F  + Q    A+ D      V +  T 
Sbjct: 78  SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK----TVKVWATH 133

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             +    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 134 RQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKSSRECVHSYCEHGGFV 190

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + I           + V         +  Q   A+     + P G+ +   
Sbjct: 191 TYVDFHPSGTCIAAAGM---DNTVKVWDVRTYRLLQHYQLHSAAVNGLSFHPSGNYLITA 247

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 248 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 282


>gi|328790864|ref|XP_003251479.1| PREDICTED: LOW QUALITY PROTEIN: notchless protein homolog 1 [Apis
           mellifera]
          Length = 476

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 57/129 (44%), Gaps = 12/129 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                Q++ + +FSPN + +A A++D      + L ++   +    +      + +  +S
Sbjct: 359 MTGHQQLINDVKFSPNGRIIASASFDK----SIKLWESNTGKYITSLRGHVQAVYSISWS 414

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
           ++  R L+S   D  + ++S  L++    + L        +  +SPD  ++V      GK
Sbjct: 415 AD-SRLLVSGSADSTLKVWS--LKTKKLCQDLPGHADEIYAVDWSPDGCRVV----SGGK 467

Query: 326 EQLYVMQSN 334
           +++  +  N
Sbjct: 468 DKILRLWQN 476



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 49/143 (34%), Gaps = 10/143 (6%)

Query: 232 DDEDILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   +YL     ++    R+   + +I   +FS NG+    S   D+++ ++  +  
Sbjct: 337 SGSDDFTLYLWRPEKEKKFIARMTGHQQLINDVKFSPNGRIIA-SASFDKSIKLWESN-T 394

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 L   +    S S+S DS  +V  S       L V         +         +
Sbjct: 395 GKYITSLRGHVQAVYSISWSADSRLLVSGS---ADSTLKVWSLKTKKLCQDLPGHADEIY 451

Query: 351 DPVWSPQGDLIAFTKFSGEKFAI 373
              WSP G  +     SG K  I
Sbjct: 452 AVDWSPDGCRVV----SGGKDKI 470



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 46/139 (33%), Gaps = 8/139 (5%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+  L+S   D  + ++  + +     R+T    +     +SP+   I   S     + +
Sbjct: 331 GEEILVSGSDDFTLYLWRPEKEKKFIARMTGHQQLINDVKFSPNGRIIASASF---DKSI 387

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            + +SN        +    + +   WS    L+           + V      +    + 
Sbjct: 388 KLWESNTGKYITSLRGHVQAVYSISWSADSRLLVSGSADST---LKVWSLKTKKLCQDLP 444

Query: 389 DSNLQ--APTWSPSGRSLI 405
               +  A  WSP G  ++
Sbjct: 445 GHADEIYAVDWSPDGCRVV 463


>gi|146083218|ref|XP_001464681.1| hypothetical protein [Leishmania infantum JPCM5]
 gi|134068775|emb|CAM59709.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 614

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 66/193 (34%), Gaps = 20/193 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP +   A  + +D     + L +  +             I++  FS +GK    +  
Sbjct: 327 ALSPAETDFASCSNED---ASITLNNFGVGSEVGIFTGHHDTIISATFSPDGKYLA-TAS 382

Query: 278 KDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSN 334
           KDE M ++ V   +     LT     + I   + PDS  +V      G       +  + 
Sbjct: 383 KDETMILWDV---TTTKILLTFAHPKVVICCCFGPDSKHLV-----SGCQDRVCRLWDTK 434

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNL 392
              +     + E       +SP G+ +           + V     ++ R  LL     +
Sbjct: 435 RGREWMNYTEHEGIIIAIAFSPDGNYVCSASADRS---LRVWSATTAKTRFHLLGHVGII 491

Query: 393 QAPTWSPSGRSLI 405
            + +++  GR +I
Sbjct: 492 LSCSYTSDGRHII 504



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 53/158 (33%), Gaps = 12/158 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +    FSP+ + +A A+ D+     + L D    +          +++   F
Sbjct: 358 IFTGHHDTIISATFSPDGKYLATASKDE----TMILWDVTTTKILLTFA-HPKVVICCCF 412

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREG 324
             + K  + S  +D    ++    +       T    I I+ ++SPD + +   S DR  
Sbjct: 413 GPDSKHLV-SGCQDRVCRLWDT-KRGREWMNYTEHEGIIIAIAFSPDGNYVCSASADRS- 469

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              L V  +  +  +              ++  G  I 
Sbjct: 470 ---LRVWSATTAKTRFHLLGHVGIILSCSYTSDGRHII 504



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 71/196 (36%), Gaps = 25/196 (12%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LT 298
           L DT+  R          +I+A  FS +G     S   D ++ ++S    + A  R  L 
Sbjct: 430 LWDTKRGREWMNYTEHEGIIIAIAFSPDGNYVC-SASADRSLRVWS---ATTAKTRFHLL 485

Query: 299 NTLFINISASYSPDSSQIVFE--------SDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             + I +S SY+ D   I+          S  +G  +L +     +   + S       +
Sbjct: 486 GHVGIILSCSYTSDGRHIISNDESLLRVWSAEDGSCKLSLSPVEVAGTLQPSHRAPKLGW 545

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW---SPSGRSLIFS 407
               +  G    F   +     + V+  D  +E   V  +  +AP +   + S   + F 
Sbjct: 546 TLSSAAPGSFTRFVLVACNNRFVYVIDIDTGRE---VASTFCKAPVYCLTAGSHEKMAF- 601

Query: 408 RKKDGDTGSKLYSIDL 423
               GD+   +Y + L
Sbjct: 602 ----GDSFGNIYILHL 613


>gi|52079107|ref|YP_077898.1| YdjN protein [Bacillus licheniformis ATCC 14580]
 gi|52784473|ref|YP_090302.1| YdjN [Bacillus licheniformis ATCC 14580]
 gi|319647120|ref|ZP_08001345.1| YdjN protein [Bacillus sp. BT1B_CT2]
 gi|52002318|gb|AAU22260.1| YdjN [Bacillus licheniformis ATCC 14580]
 gi|52346975|gb|AAU39609.1| YdjN [Bacillus licheniformis ATCC 14580]
 gi|317390767|gb|EFV71569.1| YdjN protein [Bacillus sp. BT1B_CT2]
          Length = 339

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 17/95 (17%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------PTWSPSGRS 403
            D   SP G  I FT+ + ++ AI  M  +  + + ++ D    +      P +S  G+ 
Sbjct: 225 NDVAISPDGKTIVFTESADDQKAIYAMDAETKKYKAIISDQQAFSLVDSAQPQFSKDGKK 284

Query: 404 LIFSRKK------DGDTGSK-----LYSIDLNGRN 427
           L F  +       + +TGS+     +YS D++ + 
Sbjct: 285 LYFLAEAKDAKLLEDETGSEARVRTIYSYDMDTKK 319



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 32/76 (42%), Gaps = 5/76 (6%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-----TLF 302
           +  +++      I     S +GK  + +   D+   IY++D ++   + + +     +L 
Sbjct: 212 KDRQKVRTIAKFINDVAISPDGKTIVFTESADDQKAIYAMDAETKKYKAIISDQQAFSLV 271

Query: 303 INISASYSPDSSQIVF 318
            +    +S D  ++ F
Sbjct: 272 DSAQPQFSKDGKKLYF 287



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 7/94 (7%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA----SYFDPV 353
           T   FIN  A  SPD   IVF    + ++ +Y M +     K I  D++A        P 
Sbjct: 219 TIAKFINDVA-ISPDGKTIVFTESADDQKAIYAMDAETKKYKAIISDQQAFSLVDSAQPQ 277

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +S  G  + F   + +   +    + GS+ R+  
Sbjct: 278 FSKDGKKLYFLAEAKDAKLLE--DETGSEARVRT 309



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 18/96 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL----APRFSSNGKRAL 273
             SP+ + + +     +D   +Y MD    +    I + ++  L     P+FS +GK+  
Sbjct: 228 AISPDGKTIVFTE-SADDQKAIYAMDAETKKYKAIISDQQAFSLVDSAQPQFSKDGKKLY 286

Query: 274 I-------------SVQKDEAMDIYSVDLQSNATER 296
                         +  +     IYS D+ +    +
Sbjct: 287 FLAEAKDAKLLEDETGSEARVRTIYSYDMDTKKVSK 322


>gi|220912981|ref|YP_002488290.1| hypothetical protein Achl_2236 [Arthrobacter chlorophenolicus A6]
 gi|219859859|gb|ACL40201.1| conserved hypothetical protein [Arthrobacter chlorophenolicus A6]
          Length = 371

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 68/229 (29%), Gaps = 25/229 (10%)

Query: 137 KQIIGKKFFSSPASWRKIAH--TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
           + + G      P+  R       ++  ++ +         S    +  +  +        
Sbjct: 155 QPLQGWALGGIPSRTRISPDGALLASTVFVAGHSYASAGFSTETVIRGADGTVYGNLETF 214

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            +  DG  I+    +   + F P         A+            +   R D A + + 
Sbjct: 215 ALMADGTRIKATDRNIWGVTFVP-----GAPNAFYATASSQG---NIWLVRGDLAERTLT 266

Query: 255 NFRSMILAPRFSSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              S +  P  S +GKR       S           +DL +     L     ++    + 
Sbjct: 267 VVASGVECPSISPDGKRIAFKKSDSGTLVGDRHPAVLDLATGNVTVLGEQRNLDDQLEWL 326

Query: 311 PDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            D + I++   R+   Q   ++ + ++      +       + +  WSP
Sbjct: 327 -DGNTILYGLPRDDTGQDSDIWSLSTHAGATPEL-------FIEHAWSP 367



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 47/151 (31%), Gaps = 20/151 (13%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            I      SPD + +       G        S  +  +        +         G  I
Sbjct: 164 GIPSRTRISPDGALLASTVFVAGHSYASAGFSTETVIRGADGTVYGNLETFALMADGTRI 223

Query: 362 ------------------AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                             AF   +  +  I +++ D ++  L V  S ++ P+ SP G+ 
Sbjct: 224 KATDRNIWGVTFVPGAPNAFYATASSQGNIWLVRGDLAERTLTVVASGVECPSISPDGKR 283

Query: 404 LIFSRKKDGDTGSKLY--SIDLNGRNETLIN 432
           + F +   G      +   +DL   N T++ 
Sbjct: 284 IAFKKSDSGTLVGDRHPAVLDLATGNVTVLG 314


>gi|149915680|ref|ZP_01904206.1| WD domain/cytochrome c family protein [Roseobacter sp. AzwK-3b]
 gi|149810572|gb|EDM70415.1| WD domain/cytochrome c family protein [Roseobacter sp. AzwK-3b]
          Length = 441

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 73/232 (31%), Gaps = 25/232 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                     +   +  P   +V   ++D+        +     R P+ +    + +   
Sbjct: 23  FTTLKGHGGPIMGVQVDPATGRVISGSFDNS-------VGLWQGRDPRWLEGHDAAVNTV 75

Query: 264 RF-SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            F + +      +    +  ++   DL +  + RLT         S SPD + +   S  
Sbjct: 76  LFLAPDR-----AASGGDDFNVILWDLDAGTSSRLTGHQGKVAGLSVSPDGALLASAS-W 129

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G   L+ + +      R  +   +      ++  G  +      G    I V       
Sbjct: 130 DGSIGLWPLVAPDG-APRFLRGHGSGVNAVTFASDGARLFSASADGT---IRVWDVASGA 185

Query: 383 ERLLVEDS-NLQAPTWSPSGRSLIF------SRKKDGDTGSKLYSIDLNGRN 427
           +R+L +    +      P+   L +      +R  D  +G +LY   L  R 
Sbjct: 186 DRVLTDQGFGVNRLVLGPNDAWLAYGAVDGVTRVIDPVSGEQLYDFSLERRP 237


>gi|76157588|gb|AAX28467.2| SJCHGC09556 protein [Schistosoma japonicum]
          Length = 359

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 77/209 (36%), Gaps = 12/209 (5%)

Query: 175 SRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +R+LF+    V  S     S+ V D +     +        + +  F P+ + +A  + D
Sbjct: 143 TRVLFIPHYNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSGKLLASCSAD 202

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                +V L D  I +  K +      + + +F  +G   + S  +D+ + ++ V     
Sbjct: 203 M----QVKLWDLTIYQCIKTLTGHDHNVSSVKFLPSGDFLV-SASRDKTIKMWEVSTGYC 257

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               + +T +I  S   SP+ + +   S+      + +      + + + +  E      
Sbjct: 258 TKTFVGHTDWI-RSVCPSPEGNLLASCSN---DHTIRIWSVESRECQVVLRGHEHVVECI 313

Query: 353 VWSPQGDLI-AFTKFSGEKFAIGVMKKDG 380
            W+   + I + T  S        +  DG
Sbjct: 314 AWASHPESISSITNPSSGSGDPANVVADG 342


>gi|284992191|ref|YP_003410745.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Geodermatophilus obscurus DSM 43160]
 gi|284065436|gb|ADB76374.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geodermatophilus obscurus DSM 43160]
          Length = 634

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 38/95 (40%), Gaps = 5/95 (5%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK---RISQDKEASYFDPVWSPQGDLI 361
              + +PD+ Q+ F SDR G  QLY+        +   R  +  +       W+     +
Sbjct: 29  WGPNMTPDARQVAFISDRSGMPQLYIKDVVLDGPRPAARHVKLSDDPVVSVRWAADSGWL 88

Query: 362 A--FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                   G + A+ V++ DGS  R +  D+   A
Sbjct: 89  TCEVATDGGVRTAVWVVRPDGSDARRIAGDATTHA 123



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 58/171 (33%), Gaps = 12/171 (7%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQ 315
              P  + + ++      +     +Y  D+  +        + ++        ++ DS  
Sbjct: 28  SWGPNMTPDARQVAFISDRSGMPQLYIKDVVLDGPRPAARHVKLSDDPVVSVRWAADSGW 87

Query: 316 IVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT---KFSGEK 370
           +  E   +G  +  ++V++ +GSD +RI+ D         W+  G     T      G  
Sbjct: 88  LTCEVATDGGVRTAVWVVRPDGSDARRIAGDATTHAELGPWTRSGHRFVVTFPGAAEGVP 147

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +      +   L E   ++    S   R ++    +DG  G +   +
Sbjct: 148 TRCFLADPATGRLDPLAEGELIRVLDVSLEERFIVI---RDGARGQQYVVV 195



 Score = 39.6 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 32/95 (33%), Gaps = 7/95 (7%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK--KDG----SQERLLVEDSNLQAPTWSPS 400
              + P  +P    +AF         + +     DG    ++   L +D  + +  W+  
Sbjct: 26  WGSWGPNMTPDARQVAFISDRSGMPQLYIKDVVLDGPRPAARHVKLSDDP-VVSVRWAAD 84

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
              L      DG   + ++ +  +G +   I   A
Sbjct: 85  SGWLTCEVATDGGVRTAVWVVRPDGSDARRIAGDA 119


>gi|167518311|ref|XP_001743496.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163778595|gb|EDQ92210.1| predicted protein [Monosiga brevicollis MX1]
          Length = 402

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 67/189 (35%), Gaps = 12/189 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+PN  +VA    D      V + + +      R+   +  + + +FS +G R + S  
Sbjct: 21  SFNPNLTQVASGGLDG----AVMVWNRKQSMRAFRLVGHKDGVQSVQFSPSG-RLVASGS 75

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D  + ++   ++   +              +S D S +   SD +  +     +     
Sbjct: 76  RDCTVRLWVPSVK-GESTVFKAHTGTVRCVRFSQDGSFLATSSDDKSIKIFSTYRQKF-- 132

Query: 338 QKRISQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             R+S     ++   V  SP G L+A +    +   I  +      +     D  + +  
Sbjct: 133 --RLSLKGHTNWVRSVSPSPDGRLVA-SGSDDKTVKIWDLASKTCAQTFFEPDGMITSVA 189

Query: 397 WSPSGRSLI 405
           + P G  + 
Sbjct: 190 FHPDGTCVA 198



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 81/263 (30%), Gaps = 30/263 (11%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           S  ++R + H   D +        G            V SG    ++ +          +
Sbjct: 46  SMRAFRLVGHK--DGVQSVQFSPSG----------RLVASGSRDCTVRLWVPSVKGESTV 93

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             +    +   RFS +   +A ++ D      + +  T   +    +    + + +   S
Sbjct: 94  FKAHTGTVRCVRFSQDGSFLATSSDDK----SIKIFSTYRQKFRLSLKGHTNWVRSVSPS 149

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVF-ESDREG 324
            +G R + S   D+ + I+  DL S    +       +  S ++ PD + +    SD   
Sbjct: 150 PDG-RLVASGSDDKTVKIW--DLASKTCAQTFFEPDGMITSVAFHPDGTCVAAGCSDST- 205

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +     +   +  Q  + +  D  +   GD +           + ++        
Sbjct: 206 ---VKIWDIRTNKLLQHYQVHDDAVNDISFHASGDFLLTASTDST---LKILDLREGHLF 259

Query: 385 LLVEDSNL--QAPTWSPSGRSLI 405
             +        A  +SP G    
Sbjct: 260 YTLHGHQDAATAAAFSPDGSMFA 282


>gi|159029208|emb|CAO87568.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 492

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 80/238 (33%), Gaps = 27/238 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-----SSNGKRA 272
           +FS   +++AY           Y +     R     GN     LA  F     S +   A
Sbjct: 90  KFSWAGRRLAYTLTSPIPYGEKYHLQIEGAREQFPSGNRLGQTLA-IFEREFKSRDRAFA 148

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-----DREGKEQ 327
            I    +E   +   +L       LT      ++  + PD  +I+F +       EG  +
Sbjct: 149 YIGTNGEEQGRLIFYNLTEEKKTVLTPADLTVMAFEFYPDGKKILFSAAAKNQGIEGIRE 208

Query: 328 LYVMQSNGSDQ----KRISQDKEASYFDPVWSPQGDLIAF---TKFSGEKFAIGVMKKDG 380
           L + Q + S      + +  +K+        +  G  I      + +   F +  +K  G
Sbjct: 209 LQLYQVDSSQSPAKIELVLDNKDYQNDHFDLAKDGQTIVVQRIERRNPINFDLWAVKSGG 268

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             ++L ++         +P  ++L  ++      G  +  + L    + L   P +  
Sbjct: 269 KPQQLNIQGGEFL---IAPDSKTLAVTQ------GEGIALLPLKTETKPLDFLPKFGR 317



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 79/233 (33%), Gaps = 27/233 (11%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-------V 276
           +  AY   + E+  R+   +   +     +      ++A  F  +GK+ L S       +
Sbjct: 145 RAFAYIGTNGEEQGRLIFYNL-TEEKKTVLTPADLTVMAFEFYPDGKKILFSAAAKNQGI 203

Query: 277 QKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGKE---QLYV 330
           +    + +Y VD   +  +    L N  + N     + D   IV +           L+ 
Sbjct: 204 EGIRELQLYQVDSSQSPAKIELVLDNKDYQNDHFDLAKDGQTIVVQRIERRNPINFDLWA 263

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           ++S G  Q+   Q  E      + +P    +A T+  G    I ++      + L     
Sbjct: 264 VKSGGKPQQLNIQGGE-----FLIAPDSKTLAVTQGEG----IALLPLKTETKPLDFLPK 314

Query: 391 NLQAPTWSPSGR---SLIFSRKKDG-DTGSKLYSIDLNGRNETLINTPAYASD 439
             +   +S  G     + F+           L+ ++  G  + L+N      D
Sbjct: 315 FGRILNFSADGTAAAMVNFNTDNAKMRYIRSLFYVNNQGLQKRLLNLQGSIID 367


>gi|169624469|ref|XP_001805640.1| hypothetical protein SNOG_15494 [Phaeosphaeria nodorum SN15]
 gi|111056039|gb|EAT77159.1| hypothetical protein SNOG_15494 [Phaeosphaeria nodorum SN15]
          Length = 793

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/270 (13%), Positives = 82/270 (30%), Gaps = 28/270 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           S    +++C+ D     + Y L   +   +    +SP+  K+       E+  R++  D 
Sbjct: 503 SSSKDSTICIYDTKTYKVLYHLDEHQGSGVTHLAWSPDNTKIVTCCSQPENAARIW--DV 560

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNT 300
           +       I  F        ++ +GK  +I   +D+       D +           +  
Sbjct: 561 KAGVCIAYINEFTYPCTTAAWTPSGKHVVI-GSQDDKTGCGIWDFEGRQIHNFCEDGSKI 619

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
              ++  + SPD  ++V  S+      +        ++    +  +        S     
Sbjct: 620 RANDL--AISPDGQRLVVVSESS----IVAYDFTSYEKICEVRSDDVKLTSVTISQDSRH 673

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TW-SPSGRSLIFSRKKDGDTG 415
           +  +        I +M+ D        +            +   +   ++      G   
Sbjct: 674 MLVSMSPD---EIKLMEIDTGDTIRTFKGHQQTQFIIRSAFGGANENFIV-----SGSED 725

Query: 416 SKLYSIDLNGR-NETLINTPAYASDPQWVG 444
           S++Y    +GR  ETL       +   W  
Sbjct: 726 SRIYIWRSSGRLVETLEAHVGCVNSVAWHP 755


>gi|13625467|gb|AAK35068.1| LACK protective antigen [Leishmania donovani]
          Length = 312

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 61/168 (36%), Gaps = 14/168 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + D R  ++ ++       +LA  FS +  R ++S  +D  + +++V          
Sbjct: 88  SIRMWDLRNGQSQRKFLKHTKDVLAVAFSPD-DRLIVSAGRDNVVRVWNVAGDCMHEFLR 146

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S  +SP     +  S       + V   NG   +R  +           SP 
Sbjct: 147 DGHKDWVSSICFSPSLEHPIVVSG-SWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPD 205

Query: 358 GDLIAFTKFSGEKFAIGVM-KKDGSQERLLVEDSNLQAP----TWSPS 400
           G L A    SG K  + ++      +   L +  N+++P     +SP+
Sbjct: 206 GSLCA----SGGKDGVALLWDLSTGE--QLFK-INVESPINQIAFSPN 246



 Score = 39.6 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 60/181 (33%), Gaps = 17/181 (9%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV----SESVVSGIIKNSLCVMDRDG 200
            +   +  ++ +   D +++ +     D+ S I F        VVSG   N++ V + +G
Sbjct: 124 SAGRDNVVRVWNVAGDCMHEFLRDGHKDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNG 183

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                        +     SP+    A             L D        +I N  S I
Sbjct: 184 GKCERTLKGHSNYVSTVTVSPDGSLCA----SGGKDGVALLWDLSTGEQLFKI-NVESPI 238

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNT---LFINISASYSPDSSQI 316
               FS N     ++ +K     +   DL+S      LT         IS ++S D + +
Sbjct: 239 NQIAFSPNRFWMCVATEKS----LSVYDLESKTVIAELTPDGAKPSECISIAWSADGNTL 294

Query: 317 V 317
            
Sbjct: 295 Y 295


>gi|284991861|ref|YP_003410415.1| WD-40 repeat-containing protein [Geodermatophilus obscurus DSM 43160]
 gi|284065106|gb|ADB76044.1| WD-40 repeat protein [Geodermatophilus obscurus DSM 43160]
          Length = 1308

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/228 (15%), Positives = 65/228 (28%), Gaps = 23/228 (10%)

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID--RAPKRIGNFRSMILAPRFSS 267
             D        SP+     Y    DE   RV L D  I      +++    S   A  F  
Sbjct: 1023 SDSQAPPSALSPDGH---YYAQWDESSNRVVLTDISITPVGQGRQLEGPTSTPKALAFDP 1079

Query: 268  NGKRALISVQKDEAMDIYSV--DLQSNATE---RLTNTLFINISA-SYSPDSSQIVFESD 321
             G+        D    +       ++ A      L     +     +  P    +    D
Sbjct: 1080 GGQFLASVDSPDGTQSLELSVWSAETGALSSHFPLPEGYVLGNEGLAVHPTGQTVA-TYD 1138

Query: 322  REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              G   L+  +  G     +S D  ++     +SP G  ++    +  +  +  MK    
Sbjct: 1139 SHGTVTLW--EHAGKKLTELSVDGASAVN---FSPNGRWLSVVTSANTR--LWDMKDTKQ 1191

Query: 382  QERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              R L    +    +   +SP    +  +          ++    +G 
Sbjct: 1192 SPRRLAAGPSNLVASLARFSPDEEYIAIATSDGASPYISVWRT-ADGE 1238



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 34/253 (13%), Positives = 74/253 (29%), Gaps = 30/253 (11%)

Query: 119  EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
                    +   WD    + ++     +     R++    S       T +   F+    
Sbjct: 1033 SPDGHYYAQ---WDESSNRVVLTDISITPVGQGRQLEGPTS-------TPKALAFDPGGQ 1082

Query: 179  FV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP---RFSPNQQKVAYATYDDE 234
            F+ S     G     L V   +   +    P  +  +         P  Q VA       
Sbjct: 1083 FLASVDSPDGTQSLELSVWSAETGALSSHFPLPEGYVLGNEGLAVHPTGQTVA------- 1135

Query: 235  DILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                 +   T  + A K++         A  FS NG+   +         ++ +     +
Sbjct: 1136 -TYDSHGTVTLWEHAGKKLTELSVDGASAVNFSPNGRWLSVVTSA--NTRLWDMKDTKQS 1192

Query: 294  TERLTNTLFINIS--ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              RL       ++  A +SPD   I   +       + V ++   +      +  +   D
Sbjct: 1193 PRRLAAGPSNLVASLARFSPDEEYIAIATSDGASPYISVWRTADGE---FVGEVASYASD 1249

Query: 352  PVWSPQGDLIAFT 364
             +++P  + +  +
Sbjct: 1250 YLFTPDNEHLIVS 1262



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 55/196 (28%), Gaps = 15/196 (7%)

Query: 218  RFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRAL 273
             F P  Q +A     D    L + +                  +L          G+   
Sbjct: 1076 AFDPGGQFLASVDSPDGTQSLELSVWSAETGALSSHFPLPEGYVLGNEGLAVHPTGQTVA 1135

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDREGKEQLYVMQ 332
             +      + ++           L+      +  ++SP+   + V  S      +L+ M+
Sbjct: 1136 -TYDSHGTVTLWE--HAGKKLTELSVDGASAV--NFSPNGRWLSVVTS---ANTRLWDMK 1187

Query: 333  SNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                  +R++            +SP  + IA     G    I V +    +    V    
Sbjct: 1188 DTKQSPRRLAAGPSNLVASLARFSPDEEYIAIATSDGASPYISVWRTADGEFVGEVASYA 1247

Query: 392  LQAPTWSPSGRSLIFS 407
                 ++P    LI S
Sbjct: 1248 SDY-LFTPDNEHLIVS 1262



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 45/331 (13%), Positives = 108/331 (32%), Gaps = 45/331 (13%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHT--ISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           V     ++  K  +  A   ++A +  ++ +             +          S    
Sbjct: 599 VASGLGVVVTKQRNQAAQQSRVAESSLLASEAMSLAGSRPDVALALAAAAYRRANSPEAT 658

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L  M  D  +   L  +  Q +   +F+P    V     D      + L D + D+  
Sbjct: 659 RILTRMATDHQDTDALLLTSLQSVSGVQFNPTDSNVLAVQGDGG----ITLWDVKNDKPL 714

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQK-----------DEAMDIYSVDLQSNATERLTN 299
              G     I    FS +G+   +++             ++ +D+ S D+ S        
Sbjct: 715 YATGPLDEGIGGTAFSHDGRMIALALWGTKSWVALWSPANDRVDVVSADVDS-------- 766

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             +   +  +SP+ + + F +D      + + +++    +      +A      ++    
Sbjct: 767 -AYSAGTLQFSPNDTLVAFCTDEG----IELWRADNPQLESSIPLTDALTCSFGFTADSS 821

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           ++       +++ I   +        + E     + + +P+G+  +     DG      +
Sbjct: 822 VLYMDDGEIKRWDIRTREVATHG--RVAEPGQGASLSIAPNGQVALCV---DGQGHMFWW 876

Query: 420 SIDLNGRNE-----TLI---NTPAYASDPQW 442
             D+ G+ +      L    +TP +  D QW
Sbjct: 877 --DVVGKKQLEDASQLAFTGSTPTFTPDSQW 905


>gi|221199578|ref|ZP_03572622.1| 6-phosphogluconolactonase [Burkholderia multivorans CGD2M]
 gi|221205522|ref|ZP_03578537.1| 6-phosphogluconolactonase [Burkholderia multivorans CGD2]
 gi|221211654|ref|ZP_03584633.1| 6-phosphogluconolactonase [Burkholderia multivorans CGD1]
 gi|221169015|gb|EEE01483.1| 6-phosphogluconolactonase [Burkholderia multivorans CGD1]
 gi|221174360|gb|EEE06792.1| 6-phosphogluconolactonase [Burkholderia multivorans CGD2]
 gi|221180863|gb|EEE13266.1| 6-phosphogluconolactonase [Burkholderia multivorans CGD2M]
          Length = 390

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 47/326 (14%), Positives = 97/326 (29%), Gaps = 30/326 (9%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ-IIGKKFFSSPASWRKIAHTISDDIYQS 165
           G   L+ G     G D + V +R +D        +      +P+                
Sbjct: 26  GVYNLLVGTYTDTGSDGIYV-YR-FDTSTGSVAPVSSAKTVNPSYLLPSRDGRVVYAVNE 83

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQ-----ILFEPRF 219
           + G+ G    R    +    +     + +  +  +G +  YL+ S D        +    
Sbjct: 84  LPGDNGPATQRGGISAFRFDAKTGALTFIDRVSSEGNDPCYLSLSPDGKYLVTANYSVAA 143

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            P      +   DD  +    L      + P R     + + +  FS +G+   +     
Sbjct: 144 DPGGSFALFPVRDDGGVAPAVLSVHHEGKGPVRGRQDNAHVHSTVFSPDGRYLFVQDLGL 203

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISA-------SYSPDSSQIVFESDREGKEQLY-- 329
           + +  Y   +         T+T +  + A        +S D       S+     +++  
Sbjct: 204 DKIYGYRYTVDGSRGLISPTDTRYTPVKAGAGPRHLVFSADGRFAYVTSELNASVEVFGY 263

Query: 330 ----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI---GVMKKDGSQ 382
               +               +        SP G  + +    G+   I    V + DG  
Sbjct: 264 HDGKLTPIETVSMIAPGFKGKVGGGAIHLSPDGRFL-YVSNRGDANEIVIYAVNQADGRL 322

Query: 383 ERLLVEDSNLQAPT---WSPSGRSLI 405
           + +  + S  + P      P+G+ LI
Sbjct: 323 KTVGRQSSLGRTPREFLIDPTGKWLI 348



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/207 (16%), Positives = 67/207 (32%), Gaps = 29/207 (14%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDL--QSNATERLTNTLFINISASYSPDSSQ 315
           +   +      G  AL  V+ D  +    + +  +     R         S  +SPD   
Sbjct: 136 TANYSVAADPGGSFALFPVRDDGGVAPAVLSVHHEGKGPVRGRQDNAHVHSTVFSPDGRY 195

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---------VWSPQGDLIAFTKF 366
           + F  D  G +++Y  +      + +    +  Y            V+S  G     T  
Sbjct: 196 L-FVQD-LGLDKIYGYRYTVDGSRGLISPTDTRYTPVKAGAGPRHLVFSADGRFAYVTSE 253

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-----------SPSGRSLIFSRKKDGDTG 415
                 +     DG    +  E  ++ AP +           SP GR L +   +     
Sbjct: 254 LNASVEVFGYH-DGKLTPI--ETVSMIAPGFKGKVGGGAIHLSPDGRFL-YVSNRGDANE 309

Query: 416 SKLYSID-LNGRNETLINTPAYASDPQ 441
             +Y+++  +GR +T+    +    P+
Sbjct: 310 IVIYAVNQADGRLKTVGRQSSLGRTPR 336


>gi|19920938|ref|NP_609217.1| CG17293 [Drosophila melanogaster]
 gi|195339194|ref|XP_002036205.1| GM16920 [Drosophila sechellia]
 gi|195577572|ref|XP_002078643.1| GD23532 [Drosophila simulans]
 gi|7297395|gb|AAF52654.1| CG17293 [Drosophila melanogaster]
 gi|17861498|gb|AAL39226.1| GH09638p [Drosophila melanogaster]
 gi|194130085|gb|EDW52128.1| GM16920 [Drosophila sechellia]
 gi|194190652|gb|EDX04228.1| GD23532 [Drosophila simulans]
 gi|220944108|gb|ACL84597.1| CG17293-PA [synthetic construct]
 gi|220953908|gb|ACL89497.1| CG17293-PA [synthetic construct]
          Length = 317

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 16/184 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +SG +  +L + D    N + L      +   P  + + + + +A   + + +++
Sbjct: 120 VEDTFLSGSLDKTLRLWDLRSPNCQGLMH----LSGRPIAAYDPEGLIFAAGVNSESIKL 175

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
           Y +   D       K            +FS +GK  LIS        I  VD       +
Sbjct: 176 YDLRSFDKGPFVTFKLNQEKECDWTGLKFSRDGKTILISTN---GSVIRLVDAFHGTPLQ 232

Query: 296 RLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             T   N   I I AS+SPD SQ +F    +G+  ++   + G+    ++ D        
Sbjct: 233 TFTGYPNNKGIPIEASFSPD-SQFIFSGSTDGRVHIWNADT-GNKVSVLNGDHPGPVQCV 290

Query: 353 VWSP 356
            ++P
Sbjct: 291 QFNP 294


>gi|332881491|ref|ZP_08449140.1| peptidase, S9A/B/C family, catalytic domain protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332680489|gb|EGJ53437.1| peptidase, S9A/B/C family, catalytic domain protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 746

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/343 (11%), Positives = 104/343 (30%), Gaps = 84/343 (24%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVS 186
           + + D K  K++  +++ +   +                  ++   ++ + FV   ++  
Sbjct: 129 YTVVDFKSGKKVWEQEYPADATAL-----------------DRSPSSNSLAFVRQHNLYV 171

Query: 187 GIIKNSLCVMDRDGAN----IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
              +     +  DG+N       +  +   I     +SP+ +++A+   D   +     +
Sbjct: 172 TTKEGQTMAVSSDGSNDLVYGETVHRNEFGITKGTFWSPDGKQLAFYRMDQSMVPDYPQV 231

Query: 243 DTRIDRAPKRIGNFRSM----------ILAPR---------------------FSSNGKR 271
           D     A      +             +  P                      +S + ++
Sbjct: 232 DITTRIATTYPCKYPMAGEKMHKVTVGVFTPATGRTVWLQAGDPTDRYFTNISWSPDNRK 291

Query: 272 ALIS-VQKDEA-MDIYSVDLQSNATERLT---NTLFINISAS----YSP-DSSQIVFESD 321
             +  + +D+   ++   D  +   E +          +       + P DSS+ +++S 
Sbjct: 292 IYMIELNRDQNRAELVRYDAATGKKEGVIYEEEHPKY-VEPMHGLLFLPWDSSKFIYQSQ 350

Query: 322 REGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSP--QGDLIA--------------F 363
           R+G   LY+   +   + Q+  +    A       +P   G+ +               F
Sbjct: 351 RDGYNHLYLFDLSKPQAPQRHKTFQGGACEEHVEVTPLTSGEWVVKEVLGFDLKEKSLLF 410

Query: 364 TKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                   +  I  ++    +  LL     +   + +  G  +
Sbjct: 411 CSNEIHPLQSNIYKVRVKDGKRTLLDNGEGVHYGSVNADGTYV 453


>gi|326505992|dbj|BAJ91235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 455

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/267 (14%), Positives = 80/267 (29%), Gaps = 27/267 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            S    +G  +        +G     L       ++   FSP    +            +
Sbjct: 175 PSSQGENGSSQGEHLSSTSEGKKPYTLFQGHSGPVYSAAFSPFGDFL----LSSSSDSTI 230

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L  T+++            +   +FS  G     S   D    I+S+D       R+  
Sbjct: 231 RLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFA-SASHDRTARIWSMDKI--QPLRIMA 287

Query: 300 TLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               ++    +  + + I   S     + + +      +  R+     +       SP G
Sbjct: 288 GHLADVDCVQWHVNCNYIATGSS---DKTVRLWDVQTGECIRMFIGHRSMVLSLAMSPDG 344

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS------RKKDG 412
             +A     G      +M  D S  R +   +   +  WS     L FS           
Sbjct: 345 RYMASGDEDGT-----IMMWDLSTGRCVSPLAGHNSCVWS-----LAFSCEGALLASGSA 394

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASD 439
           D   KL+ +  + +   + +T A +++
Sbjct: 395 DCTVKLWDVASSTKALKMDDTKAGSTN 421


>gi|298241428|ref|ZP_06965235.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297554482|gb|EFH88346.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 433

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 76/252 (30%), Gaps = 31/252 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    F P+ Q +A  + D      + L D         +      + A  
Sbjct: 139 QTLKGHTSWVRCLAFRPDGQILASGSIDG----SIKLWDPSHGHLLHTLTGHVGGVFALV 194

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
           +S +G   L+S  +D A+ ++  D QS    R        + A + S D   +V  S   
Sbjct: 195 WSPSGG-LLVSGGQDSAIKLW--DPQSGKLLRALEGHGNGVRALALSTDGQTLVSASI-- 249

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + +         QK    D  +  +    SP   +IA      E   I +      + 
Sbjct: 250 -DQTVRPWDLQTGRQKPSFIDHPSPLYSVAMSPDHQIIA---SGDEVGVIRLWHAHTRKL 305

Query: 384 RLLVEDSNLQAPT--------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTP 434
              + D + +  +        +S S   L+       D   K +  D +GR   T     
Sbjct: 306 LRTLRDHSGKVLSLIMVNDRQFSISSTMLM---SGSADRTMKWWGAD-DGRLISTFTGHA 361

Query: 435 AYAS----DPQW 442
                    P W
Sbjct: 362 GPVRSVAFHPTW 373



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 101/275 (36%), Gaps = 44/275 (16%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG I  S+ + D    ++ +        +F   +SP+   +            + L D +
Sbjct: 162 SGSIDGSIKLWDPSHGHLLHTLTGHVGGVFALVWSPSGGLLV----SGGQDSAIKLWDPQ 217

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
             +  + +    + + A   S++G+  + S   D+ +  +  DLQ+   +    +     
Sbjct: 218 SGKLLRALEGHGNGVRALALSTDGQTLV-SASIDQTVRPW--DLQTGRQKPSFIDHPSPL 274

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S + SPD  QI+   D  G  +L+   +    +K +   ++ S         G +++  
Sbjct: 275 YSVAMSPD-HQIIASGDEVGVIRLWHAHT----RKLLRTLRDHS---------GKVLSLI 320

Query: 365 KFSGEKFAI-GVMKKDGS-----------QERLLVEDSNLQAP----TWSPSGRSLIFSR 408
             +  +F+I   M   GS             RL+   +    P     + P+ +++I S 
Sbjct: 321 MVNDRQFSISSTMLMSGSADRTMKWWGADDGRLISTFTGHAGPVRSVAFHPTWQTVISSS 380

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           +        LY     G  ET+   P +A  P + 
Sbjct: 381 EDKTIKEWNLY-----GAQETIRTLPGHAG-PVYS 409


>gi|156544931|ref|XP_001603881.1| PREDICTED: similar to platelet-activating factor acetylhydrolase
           isoform 1b alpha subunit [Nasonia vitripennis]
          Length = 410

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 87/278 (31%), Gaps = 43/278 (15%)

Query: 176 RILF--VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           R++F  V   VV+     ++ V D +              + +  F  + + +   + D 
Sbjct: 113 RVVFHPVFSLVVTASEDATIKVWDFETGEFERTLKGHTDSVQDIAFDTSGKLLVSCSSDM 172

Query: 234 EDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                + L D +      K +      + +  F   G   + S  +D+ + I+ V     
Sbjct: 173 ----TIKLWDFQQSFSCIKTMHGHDHNVSSVTFVPQGDFIV-SASRDKTIKIWEV-ATGY 226

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             + LT        A  SP    I   S+    + + V      + K   +D +      
Sbjct: 227 CVKTLTGHREWVRMARISPCGELIASCSN---DQTVRVWHIASKETKVELRDHDHVVECI 283

Query: 353 VWSPQ-------------------GDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSN 391
            W+P                    G  +A          I V           LL  D+ 
Sbjct: 284 AWAPDCARATINAAAGADNKGAHEGPFLASGSRDKT---IRVWDVGSGVCLFTLLGHDNW 340

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           ++   + PSG+ ++ +     D   +++    + RN+ 
Sbjct: 341 VRGIVFHPSGKFIVSASD---DKTLRVW----DTRNKR 371



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 68/190 (35%), Gaps = 13/190 (6%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           ++++F P FS              +   + + D       + +      +    F ++GK
Sbjct: 112 NRVVFHPVFS--------LVVTASEDATIKVWDFETGEFERTLKGHTDSVQDIAFDTSGK 163

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             L+S   D  + ++      +  + +        S ++ P    IV  S R+   +++ 
Sbjct: 164 -LLVSCSSDMTIKLWDFQQSFSCIKTMHGHDHNVSSVTFVPQGDFIVSAS-RDKTIKIWE 221

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           + + G   K ++  +E        SP G+LIA            +  K+   E L   D 
Sbjct: 222 V-ATGYCVKTLTGHREWVRMA-RISPCGELIASCSNDQTVRVWHIASKETKVE-LRDHDH 278

Query: 391 NLQAPTWSPS 400
            ++   W+P 
Sbjct: 279 VVECIAWAPD 288


>gi|298244548|ref|ZP_06968354.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297552029|gb|EFH85894.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 729

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 77/233 (33%), Gaps = 33/233 (14%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR----FSPNQQKVAYATYDD 233
               ++      +  +C +D    N+  + P+  + +         SP+  +VA+   D+
Sbjct: 500 FIPEDTSKKTPSRTEMCTLDAQLQNLHVIDPNAAKNISFKSDTLSLSPDGTQVAFLRDDN 559

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-----------ISVQKDEAM 282
             I    +  T     P+      S      ++++ +  +               +D+A+
Sbjct: 560 IVIGSFQISPTTTSWQPRSTLPLPSSSYDAAWAADSQTLVMFTNSDAGSISYFSSQDKAL 619

Query: 283 DIYSVDLQSNATERLTNTLFINISASYS----------PDSSQIVFESDREGKEQLYVMQ 332
             +S+ + S +  + T+   I +  + S          P S      +   G  ++++  
Sbjct: 620 MPHSLQIPS-SLRKPTDDANIPLDPTISAPSINCIACNPASLTPAVAAGTTGG-EIFLWN 677

Query: 333 SNGS-----DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              +          +     S     WSP G  +A   +  +  +I + K  G
Sbjct: 678 RQENAHPIHGPLTSTTTGTRSVKALSWSPDGKWLA-ASYGDDNASILIWKVRG 729


>gi|121710554|ref|XP_001272893.1| wd40 protein [Aspergillus clavatus NRRL 1]
 gi|322518323|sp|A1CF18|LIS12_ASPCL RecName: Full=Nuclear distribution protein nudF 2; AltName:
           Full=Lissencephaly-1 homolog 2; Short=LIS-1 2
 gi|119401043|gb|EAW11467.1| wd40 protein [Aspergillus clavatus NRRL 1]
          Length = 435

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 66/225 (29%), Gaps = 31/225 (13%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
             DG          D I+   RF PN   +A A+ D      V L D       K I   
Sbjct: 163 PADGYKNIRTLQGHDHIVSAVRFIPNGSLLASASRDM----DVRLWDVTNGYCVKTIQGH 218

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT----------NTLFINIS 306
              +     S +G+     +   + M +   D+ +    +LT            +    S
Sbjct: 219 TGWVRDVCASLDGR---FILSTGDDMTVRLWDISAKPENKLTMVGHENFNECCAIAPPTS 275

Query: 307 ----------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                     A  S   S   F +     + + +  + G+    ++   +      V+ P
Sbjct: 276 YQYLAPLARLAKVSRAGSTAEFMATGSRDKTIKLWDARGTCLMTLT-GHDNWVRAIVFHP 334

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSP 399
            G  +       +      + ++G   + +       +    W+P
Sbjct: 335 GGRYLLSVS-DDKTLRCWDLSQEGKCVKTIRDTHGGFITCLRWAP 378


>gi|62913993|gb|AAH07417.2| WDR51A protein [Homo sapiens]
          Length = 396

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 84/233 (36%), Gaps = 18/233 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 20  TKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRD--KTVRIW 77

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+   ++   D+ + +++   Q      L+  
Sbjct: 78  VPNVKGESTVFR--AHTATVRSVHFCSDGQS-FVTASDDKTVKVWATHRQ-KFLFSLSQH 133

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +   +  +      +         + P G  
Sbjct: 134 INWVRCAKFSPDGRLIVSASD---DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTC 190

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
           IA            V        RLL    +  + +   ++ PSG  LI +  
Sbjct: 191 IAAAGMDNTVKVWDV-----RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 238



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 67/225 (29%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +      +  +    +    F  + Q    A+ D      V +  T 
Sbjct: 67  SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK----TVKVWATH 122

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             +    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 123 RQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKSSRECVHSYCEHGGFV 179

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + I           + V         +  Q   A+     + P G+ +   
Sbjct: 180 TYVDFHPSGTCIAAAGM---DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITA 236

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 237 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 271


>gi|315499209|ref|YP_004088013.1| hypothetical protein Astex_2206 [Asticcacaulis excentricus CB 48]
 gi|315417221|gb|ADU13862.1| hypothetical protein Astex_2206 [Asticcacaulis excentricus CB 48]
          Length = 449

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 53/185 (28%), Gaps = 18/185 (9%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL--FEPRFSPNQQK 225
            ++G     ++F             L   D +G N+    P          P ++P+ + 
Sbjct: 264 NQQGTRGFVVIFSKNVPGRAGWPPQLMTFDIEGGNVSLAMPDALWKHGGHHPSWAPDGEH 323

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-------VQK 278
           +        + +R            +           P    +G   L         + K
Sbjct: 324 ITMNLRSKGERMRFVKFRYDGRDLVELCSGAIGG-GHPSLHPSGDFLLTDAYVSEPFIDK 382

Query: 279 DEAMDIYSVDLQSN--------ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +  + +  +              T+RL     I+    +S D S+++F     G  Q+ +
Sbjct: 383 EGRVPLRLLSTSDGRDDPLCWVNTKRLDGPRRIDPHPVWSRDGSKVIFNGVVNGMRQVMI 442

Query: 331 MQSNG 335
               G
Sbjct: 443 ADVRG 447



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 52/173 (30%), Gaps = 31/173 (17%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFI---NISASYSPDSSQIVFESDREG-KEQLYVMQ 332
           +      + + D++                    S++PD   I      +G + +    +
Sbjct: 282 RAGWPPQLMTFDIEGGNVSLAMPDALWKHGGHHPSWAPDGEHITMNLRSKGERMRFVKFR 341

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN- 391
            +G D   +          P   P GD +    +  E F    + K+G     L+  S+ 
Sbjct: 342 YDGRDLVELCSGAIGG-GHPSLHPSGDFLLTDAYVSEPF----IDKEGRVPLRLLSTSDG 396

Query: 392 -------------------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                                 P WS  G  +IF+   +G    ++   D+ G
Sbjct: 397 RDDPLCWVNTKRLDGPRRIDPHPVWSRDGSKVIFNGVVNG--MRQVMIADVRG 447


>gi|329956476|ref|ZP_08297073.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           clarus YIT 12056]
 gi|328524373|gb|EGF51443.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           clarus YIT 12056]
          Length = 729

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 73/181 (40%), Gaps = 12/181 (6%)

Query: 264 RFSSNGKRA-LISVQKDEA-MDIYSVDLQSNAT--ERLTNTLFINISAS----YSP-DSS 314
            ++ +GK   LI + +++    +   + ++       +  T    +       + P D +
Sbjct: 286 SWAPDGKSLYLIELNRNQNHAKLCRYNSETGELMSTLIEETHSKYVEPQQPILFLPWDHT 345

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFA 372
           Q +++S ++G   LY+  ++G   K++++          ++ +    +IA T+ S  +  
Sbjct: 346 QFIYQSQKDGYNHLYLYNTDGKLIKQLTKGDWLVQDVLGFNAKKKEVIIASTELSPLQSN 405

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +  +  + ++   L     +     S SG  +I  R    DT  ++  ++   R    + 
Sbjct: 406 LYKVNVNTNKRTPLDNSEGVHNGILSASGNYII-DRYSTPDTPRQIEIVNTQNRKSISLL 464

Query: 433 T 433
           T
Sbjct: 465 T 465


>gi|301770363|ref|XP_002920586.1| PREDICTED: acylamino-acid-releasing enzyme-like [Ailuropoda
           melanoleuca]
          Length = 732

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 17/131 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------DDEDILRVYL 241
             +++L  +D  G     L+      +  PR SP+Q ++ Y  Y           L +Y 
Sbjct: 277 NRRSALYYVDLTGGQCELLSDD-SLAVSSPRLSPDQCRIVYLRYPSLVPHHQCSQLCLYD 335

Query: 242 MDTRIDRA-----PKRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQS 291
             T++        P+++G   S I         +S++ +R +    +    D++ VD Q+
Sbjct: 336 WYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFVVDTQT 395

Query: 292 NATERLTNTLF 302
            +   LT    
Sbjct: 396 GSVTSLTAGGS 406



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 63/188 (33%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D +  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 224 LCVLDVESGNISVLEGVPESVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRFCTNRRSALY 283

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNA-- 293
            +D    +  + + +    + +PR S +  R +               +   D  +    
Sbjct: 284 YVDLTGGQC-ELLSDDSLAVSSPRLSPDQCRIVYLRYPSLVPHHQCSQLCLYDWYTKVTS 342

Query: 294 ------TERLT-NTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  N   I  S      +S DS ++VF+S +  ++ L+V+ +       ++
Sbjct: 343 VVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFVVDTQTGSVTSLT 402

Query: 343 QDKEASYF 350
                  +
Sbjct: 403 AGGSGGSW 410



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 39/143 (27%), Gaps = 21/143 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----- 326
                 +     +Y VDL     E L++      S   SPD  +IV+             
Sbjct: 272 IRFCTNR--RSALYYVDLTGGQCELLSDDSLAVSSPRLSPDQCRIVYLRYPSLVPHHQCS 329

Query: 327 QLYVMQ--------SNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIG 374
           QL +                +++ ++    Y        WS     + F      +  + 
Sbjct: 330 QLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLF 389

Query: 375 VMKKDGSQERLLVEDSNLQAPTW 397
           V+         L    +    +W
Sbjct: 390 VVDTQTGSVTSLTAGGSGG--SW 410


>gi|226226494|ref|YP_002760600.1| hypothetical protein GAU_1088 [Gemmatimonas aurantiaca T-27]
 gi|226089685|dbj|BAH38130.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 724

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 36/98 (36%), Gaps = 2/98 (2%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEASYF 350
                LT     +   +++ DS  + + S+R +G   +Y    +      + +    S +
Sbjct: 131 GVPANLTRRAGYDNQPAFAADSRSLFYTSNRGDGHTDIYRTDLSTGLSVPVRRTMPESEY 190

Query: 351 DPVWSPQGDLIAFTKF-SGEKFAIGVMKKDGSQERLLV 387
             + +  G  I   +  +     +  +  DG + R+L 
Sbjct: 191 SAMPTGDGKAITVIRVEADSTQRLWQLPLDGGEARVLF 228



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 61/196 (31%), Gaps = 13/196 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
              R     +P F+ + + + Y +   +    +Y  D     +            +   +
Sbjct: 136 LTRRAGYDNQPAFAADSRSLFYTSNRGDGHTDIYRTDLSTGLSVPVRRTMPESEYSAMPT 195

Query: 267 SNGKRA-LISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDR 322
            +GK   +I V+ D    ++ + L       L      +      +   DS+  +F    
Sbjct: 196 GDGKAITVIRVEADSTQRLWQLPLDGGEARVLFPEIKPVGYFAQPN---DSTWALFV--- 249

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G      +  +G     +           +  P  + ++F +     + +  +  D  +
Sbjct: 250 LGTPATLQLAHHGRGTGEVLARDIGRSLHRI--PGTNAVSFVQKGSTPWRVMRLDPDTRR 307

Query: 383 ERLLVE-DSNLQAPTW 397
              LVE  +  +  TW
Sbjct: 308 IEPLVELPTGSEDVTW 323


>gi|325190903|emb|CCA25389.1| putative dipeptidyl peptidase IV [Albugo laibachii Nc14]
 gi|325190978|emb|CCA25462.1| putative dipeptidyl peptidase IV [Albugo laibachii Nc14]
          Length = 820

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 49/251 (19%), Positives = 82/251 (32%), Gaps = 48/251 (19%)

Query: 218 RFSPNQ----QKVAYATYDDEDILRVYLMDTRIDRAP----KRIGNFRSMILAPRFSSNG 269
            +SP      +++ Y    D     +Y+ +    +      K         + P+FS +G
Sbjct: 138 TWSPTSLGSTKRLLYPIQGD-----LYIQEDAGSQLALLFDKLSTGVAGGAIDPQFSPDG 192

Query: 270 KRALI----------SVQKDEAMDIYSVDLQSNATERLTNTLFI-----------NISAS 308
           K              S  +D  + + +V +   A  RL  +  +                
Sbjct: 193 KYIAFVQDREIYVIPSTHQDSTLPVKAVQVTKGARNRLGISNGLACFLTQEELSRYRGFW 252

Query: 309 YSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +SPDS  I F + D     +  +M   GS   R +Q+     F    +P+   +   +  
Sbjct: 253 WSPDSRHIAFEQVDESEINEYRIMHQGGSTLGRDAQEDHRYPFAGKENPR-RRLGIVRVR 311

Query: 368 GEKFAIGVMKKDGS------QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            E   I     DG+         LL ED  +    W P  +SL   R     T       
Sbjct: 312 TEIEEI-----DGTIWMRFETVNLLNEDFYISRVNWLPD-QSLGVQRLNRSQTELTFVRF 365

Query: 422 DLNGRNETLIN 432
           D NG+   L+ 
Sbjct: 366 DSNGKGTVLLA 376



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 69/231 (29%), Gaps = 73/231 (31%)

Query: 218 RFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP------------- 263
            FSP+ Q V+Y  + ++E    +Y +        +       +   P             
Sbjct: 61  SFSPDGQIVSYLQSNENELTNNLYGVHIPSHSKSEPFQAPDLLATPPNSGNTEVNLSLEE 120

Query: 264 -----------------RFSS----NGKRALISVQKDEAMDIYSVDLQSNATERL----- 297
                             +S     + KR L  +Q D    +Y  +   +    L     
Sbjct: 121 RLRRERQRQLGVGITSYTWSPTSLGSTKRLLYPIQGD----LYIQEDAGSQLALLFDKLS 176

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR----------------- 340
           T      I   +SPD   I F  DRE    +YV+ S   D                    
Sbjct: 177 TGVAGGAIDPQFSPDGKYIAFVQDRE----IYVIPSTHQDSTLPVKAVQVTKGARNRLGI 232

Query: 341 -------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQE 383
                  ++Q++ + Y    WSP    IAF +    +     +M + GS  
Sbjct: 233 SNGLACFLTQEELSRYRGFWWSPDSRHIAFEQVDESEINEYRIMHQGGSTL 283


>gi|319411642|emb|CBQ73686.1| probable TUP1-general transcription repressor [Sporisorium
           reilianum]
          Length = 737

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/230 (16%), Positives = 72/230 (31%), Gaps = 36/230 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM------ILAPRFSSNGKR 271
           RFS + + +A             + DT+       + +  +       I +  FS +GK 
Sbjct: 429 RFSADGKYLA-----TGCNKSAQIFDTKTGAKTCVLTDQSANSKGDLYIRSVCFSPDGKC 483

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYV 330
              +  +D  + I+  D+     + L +       S  YS D   I   S   G + + +
Sbjct: 484 LA-TGAEDRQIRIW--DIGKKKVKHLFSGHKQEIYSLDYSKDGRIIASGS---GDKTVRI 537

Query: 331 MQSNGSDQKRISQDKEASYFDPV--------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                                P          S    L+A          + V      +
Sbjct: 538 WDVENGQLLHTLYTSPGLEHGPSEAGVTSVSISSDNRLVAAGALDT---LVRVWDAQTGK 594

Query: 383 --ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             ERL     ++ + +++P G+SL+      G     L   DL G  + +
Sbjct: 595 QLERLKSHKDSIYSVSFAPDGKSLV-----SGSLDKTLKLWDLAGTAKAV 639



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 67/203 (33%), Gaps = 37/203 (18%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--------FSPNQQKVAYATYDDEDIL 237
           SG    ++ + D +   + +   +   +   P          S + + VA    D     
Sbjct: 528 SGSGDKTVRIWDVENGQLLHTLYTSPGLEHGPSEAGVTSVSISSDNRLVAAGALDT---- 583

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---- 293
            V + D +  +  +R+ + +  I +  F+ +GK  + S   D+ + ++  DL   A    
Sbjct: 584 LVRVWDAQTGKQLERLKSHKDSIYSVSFAPDGKSLV-SGSLDKTLKLW--DLAGTAKAVQ 640

Query: 294 -------------TERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQK 339
                                   +S S SPD   +   S DR     +       +  +
Sbjct: 641 ENRAEEKGGHANCATTFVGHKDYVLSVSCSPDGQWVASGSKDRG----VQFWDPKTAQAQ 696

Query: 340 RISQDKEASYFDPVWSPQGDLIA 362
            +    + S      SP G L+A
Sbjct: 697 FVLHGHKNSVIAINLSPAGGLLA 719



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 75/212 (35%), Gaps = 37/212 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR+I  G     V  R+WDV++ + +     ++SP     + H  S+     +T      
Sbjct: 523 GRIIASGSGDKTV--RIWDVENGQLL--HTLYTSPG----LEHGPSEA---GVTSVSISS 571

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT--- 230
           ++R++       +G +   + V D           S    ++   F+P+ + +   +   
Sbjct: 572 DNRLV------AAGALDTLVRVWDAQTGKQLERLKSHKDSIYSVSFAPDGKSLVSGSLDK 625

Query: 231 ----YDDEDILRVYLMD-----TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
               +D     +    +                  +  +L+   S +G+    S  KD  
Sbjct: 626 TLKLWDLAGTAKAVQENRAEEKGGHANCATTFVGHKDYVLSVSCSPDGQWVA-SGSKDRG 684

Query: 282 MDIYSVDLQSNATERLTNT-----LFINISAS 308
           +  +  D ++   + + +      + IN+S +
Sbjct: 685 VQFW--DPKTAQAQFVLHGHKNSVIAINLSPA 714


>gi|296283328|ref|ZP_06861326.1| hypothetical protein CbatJ_06886 [Citromicrobium bathyomarinum
           JL354]
          Length = 707

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 12/108 (11%)

Query: 310 SPDSSQIVFES---------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           SPD S++ + +         +  G  Q  +  + G D  R+   ++ S     +SP G +
Sbjct: 69  SPDGSRVAYTTASLPDVVAGEDNGSTQQQLKMAYGPDNTRVFLPEDVSVSTVEFSPDGRM 128

Query: 361 IAFT-KFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
           ++F      E  A+  +  DG  +  L E  D+++++  W+P G +L 
Sbjct: 129 VSFLWSKDDEDRAVWGIPVDGGAQMKLAEVKDASVRSYAWAPDGATLY 176



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 58/364 (15%), Positives = 108/364 (29%), Gaps = 57/364 (15%)

Query: 113 TGRVIKEGKDRLRVEF---RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            G +        RV +    L DV   +     +     A           +     T E
Sbjct: 63  VGAIAVSPDGS-RVAYTTASLPDVVAGEDNGSTQQQLKMAYGPDNTRVFLPEDVSVSTVE 121

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV--- 226
              F+     VS          ++  +  DG     L   +D  +    ++P+   +   
Sbjct: 122 ---FSPDGRMVSFLWSKDDEDRAVWGIPVDGGAQMKLAEVKDASVRSYAWAPDGATLYLL 178

Query: 227 ------------------AYATYDDEDILRVYLMDT---RIDRAPKRIGNFRSMILAPRF 265
                             A    ++E   R++        ID  P+ I      + + + 
Sbjct: 179 ASAAPDTDRKAEAKKGFNAVVYEEEERFNRLFAAQAGGEEIDAKPREIA-VSGYVTSFKL 237

Query: 266 SSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           + +GK  ++  Q    +D       +  +DL +    R   T         SPD  Q+  
Sbjct: 238 TPDGKLGIVESQPTPRIDDTYTASRVNIIDLGTGRVLREVETPGKLGDLEVSPDGRQLSL 297

Query: 319 ESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +  +  +     L+++       + ++Q    +  D  W   G L A     G    + 
Sbjct: 298 VAGIDQHDPAATTLHLVDVASGAYRALNQGAAEAVGDTEWLANGQLAAIVD-KGADTILR 356

Query: 375 VMKKDGSQER-----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +   DGS  +      LV  S          G   +F R        +L++  LNG   T
Sbjct: 357 MYNADGSVAQEIDPGELVPTSLENG------GSDSLFVRADSPRHPGELFA--LNGTTLT 408

Query: 430 LINT 433
              +
Sbjct: 409 RWTS 412



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 11/111 (9%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-------NISAS--- 308
            + A   S +G R   +      +     +  +    ++             ++S S   
Sbjct: 62  SVGAIAVSPDGSRVAYTTASLPDVVAGEDNGSTQQQLKMAYGPDNTRVFLPEDVSVSTVE 121

Query: 309 YSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +SPD   + F  S  +    ++ +  +G  Q ++++ K+AS     W+P G
Sbjct: 122 FSPDGRMVSFLWSKDDEDRAVWGIPVDGGAQMKLAEVKDASVRSYAWAPDG 172


>gi|283850213|ref|ZP_06367502.1| peptidase C14 caspase catalytic subunit p20 [Desulfovibrio sp.
           FW1012B]
 gi|283574239|gb|EFC22210.1| peptidase C14 caspase catalytic subunit p20 [Desulfovibrio sp.
           FW1012B]
          Length = 959

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/211 (15%), Positives = 70/211 (33%), Gaps = 19/211 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +    +  L+    SP+ + V    +  Y  +    VY+ +    R  +R+    S++  
Sbjct: 84  IGHDYEGRLYSVAMSPDGRYVFCGGWTGYGWDKTHSVYIFERESGRLVRRLNGLPSVVNH 143

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSPDSSQIVFES 320
              S +G     ++ +         DL           +    +  A++          S
Sbjct: 144 LAVSHDGNYLAAALGEGGVRVWRLSDLALVGGDK----DYAGESYGAAFDNKGHLA--TS 197

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             +G  +LY +   G      ++ +  +  F   +SP    +A         A+ V+  +
Sbjct: 198 CYDGMIRLYRVTDTGISLIAKTRTQGGTRPFSLAFSPDNTQLAVGFTDTT--AVTVLDAE 255

Query: 380 G----SQERLL-VEDSNLQAPTWSPSGRSLI 405
                    L  V++ NL +  ++  G  L 
Sbjct: 256 TLSLLGAPNLTGVDNGNLASVAFAADGSLLA 286


>gi|71895077|ref|NP_001026406.1| transcription initiation factor TFIID subunit 5 [Gallus gallus]
 gi|60098933|emb|CAH65297.1| hypothetical protein RCJMB04_15p4 [Gallus gallus]
          Length = 785

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 60/170 (35%), Gaps = 16/170 (9%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS---NATERL 297
           +MD +     K +      +    FS +    L S  +D  + ++S+   +         
Sbjct: 512 IMDEKTASELKILYGHSGPVYGTSFSPDRNYLL-SCSEDGTVRLWSLQTFTCLVGYKGH- 569

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSP 356
            N    +    +SP      F S   G +++  + + +     RI     A      + P
Sbjct: 570 -NYPVWDTQ--FSPYG--YYFVS--GGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHP 622

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
             + IA T  +     +  +  +G+  R+       + +  +SP+GR L 
Sbjct: 623 NSNYIA-TGSADRTVRLWDV-LNGNCVRIFTGHKGPIHSLAFSPNGRFLA 670



 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 71/213 (33%), Gaps = 12/213 (5%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD   A+   +       ++   FSP++  +   + D    +R++ + T       + 
Sbjct: 511 RIMDEKTASELKILYGHSGPVYGTSFSPDRNYLLSCSED--GTVRLWSLQTFTCLVGYKG 568

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            N+   +   +FS  G    +S   D    +++ D            L       + P+S
Sbjct: 569 HNYP--VWDTQFSPYG-YYFVSGGHDRVARLWATDH-YQPLRIFAGHLADVTCTRFHPNS 624

Query: 314 SQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           + I   S DR     + +      +  RI    +       +SP G  +A T  +  +  
Sbjct: 625 NYIATGSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLA-TGATDGRVL 679

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +  +        L      + A  +S  G  L 
Sbjct: 680 LWDIGHGLMVGELKGHTDTIYALRFSRDGEILA 712



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 570 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 625

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 626 YIATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDG----RVLLW 681

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      I A RFS +G   L S   D  + ++
Sbjct: 682 DIGHGLMVGELKGHTDTIYALRFSRDG-EILASGSMDNTVRLW 723


>gi|23097689|ref|NP_691155.1| acylamino-acid-releasing enzyme [Oceanobacillus iheyensis HTE831]
 gi|22775912|dbj|BAC12190.1| acylamino-acid-releasing enzyme (acylaminoacyl peptidase)
           [Oceanobacillus iheyensis HTE831]
          Length = 598

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 50/132 (37%), Gaps = 7/132 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIV--FES 320
            S +  + + +   +  M+++++DL+  +    +       +   ++ P+   ++  F+S
Sbjct: 23  VSKDENKLVFATNINGTMNLWAMDLKEGSKFPYQFAQKGESSNFTAFDPEGKFVLTDFDS 82

Query: 321 DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMK 377
           D +   Q+Y +   G   K  I+   E  Y     S  G  + +         F   V  
Sbjct: 83  DGDENYQIYALPYEGGIPKPLITGKPEDKYLFSHLSEDGKRVYYNTSVDNPSFFNTRVKD 142

Query: 378 KDGSQERLLVED 389
            +   + L+ E 
Sbjct: 143 LENDSDTLIYEG 154



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 52/131 (39%), Gaps = 8/131 (6%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSD--QKRISQDKEASYFDPVWSPQGDLIA--F 363
           + S D +++VF ++  G   L+ M          + +Q  E+S F   + P+G  +   F
Sbjct: 22  NVSKDENKLVFATNINGTMNLWAMDLKEGSKFPYQFAQKGESSNFT-AFDPEGKFVLTDF 80

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP---SGRSLIFSRKKDGDTGSKLYS 420
                E + I  +  +G   + L+         +S     G+ + ++   D  +      
Sbjct: 81  DSDGDENYQIYALPYEGGIPKPLITGKPEDKYLFSHLSEDGKRVYYNTSVDNPSFFNTRV 140

Query: 421 IDLNGRNETLI 431
            DL   ++TLI
Sbjct: 141 KDLENDSDTLI 151



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/95 (11%), Positives = 28/95 (29%), Gaps = 3/95 (3%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ---ERLLVEDSNLQAPTWSP 399
             +  +      S   + + F         +  M          +   +  +     + P
Sbjct: 12  FFRTYTISHFNVSKDENKLVFATNINGTMNLWAMDLKEGSKFPYQFAQKGESSNFTAFDP 71

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            G+ ++     DGD   ++Y++   G     + T 
Sbjct: 72  EGKFVLTDFDSDGDENYQIYALPYEGGIPKPLITG 106


>gi|256070395|ref|XP_002571528.1| notchless homolog 1 [Schistosoma mansoni]
 gi|238656672|emb|CAZ27758.1| notchless homolog 1 [Schistosoma mansoni]
          Length = 564

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 74/193 (38%), Gaps = 21/193 (10%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S     SL     D   +         ++ + +FSPN + +A A++D      V + D 
Sbjct: 386 GSDDNTLSLWQPGIDKKPLAPRMTGHQGVVNDVKFSPNGRLLASASFDH----SVKIWDG 441

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +    +      +    +SS+  R ++S  KD  + ++SV+       R  N   + 
Sbjct: 442 FTGQFLATMFGHVQDVYLVSWSSD-SRLVVSCSKDSTVKVWSVN----EVRRW-NQESLT 495

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEA---SYFDPVWSPQGDL 360
           +S     +  + +F SD  GK++     S    +KR +  D      + +   WSP G  
Sbjct: 496 VS---KEEKKKQIFASDVAGKKRSSSSSSLVHQRKRHLLHDLPGHSDAVYALDWSPDGQY 552

Query: 361 IAFTKFSGEKFAI 373
           +     SG K  I
Sbjct: 553 VV----SGGKDRI 561



 Score = 36.9 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 208 PSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            S+      P+F     + V   TY  + + RV      + R    I   +  +L  +FS
Sbjct: 86  RSKGTDPSLPKFGSTGLEAVVKVTYQAQAVFRVR----PVTRCSSSIPGHKGAVLVAQFS 141

Query: 267 SNGKRALISVQKDEAMDIY----SVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            +G+    S   D+ +  +     + L + +           +  ++SPD+ ++ 
Sbjct: 142 PDGRSLA-SGSGDQTVRFWDLNTELPLSTGSEV----HKAPVLCLAWSPDAVRLA 191


>gi|229062052|ref|ZP_04199377.1| TolB domain protein [Bacillus cereus AH603]
 gi|228717204|gb|EEL68879.1| TolB domain protein [Bacillus cereus AH603]
          Length = 384

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 81/239 (33%), Gaps = 53/239 (22%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   + +T    + +  P++S N + +AYA     + L +Y +     +  K++   +S 
Sbjct: 16  GKKEKQITKG--EYITGPKWSHNGEWLAYAKGKKRNHLELYRL-----KDGKKVTPSQSE 68

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIV 317
               ++S           +     +   D +      E + N +      ++ PD  + +
Sbjct: 69  ASNYQWSPTENIIAFVFAR----TLNIFDAEKKKADFENVANGVGDY---AWYPDGKKFL 121

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASY---------------------FDPVWSP 356
             S+       +     G+    I +D   +                          WSP
Sbjct: 122 VSSEAYLLPTGWT----GAQLYEIQKDANMNPHKMKHLYALPNEHDDFLALVGSGFKWSP 177

Query: 357 QGDLIAF-----TKFSGEKFAIGVMKKDG----SQERLLVEDSNLQAPTWSPSGRSLIF 406
               I+F        S +   + +++ DG    + +++L+     +   W+PS  +L +
Sbjct: 178 DQKWISFLAVPTASLSADSNTLCLIRSDGNRFETVDQMLLNTQWFK---WAPSKNTLAY 233



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 57/155 (36%), Gaps = 19/155 (12%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +       +  + I          +++T   +I     +S +   + +   ++ +  L +
Sbjct: 2   KVAFIRNHNLWVKI------GKKEKQITKGEYI-TGPKWSHNGEWLAYAKGKK-RNHLEL 53

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +     +   SQ + ++Y    WSP  ++IAF         I   +K  +    +    
Sbjct: 54  YRLKDGKKVTPSQSEASNY---QWSPTENIIAFV--FARTLNIFDAEKKKADFENVANGV 108

Query: 391 NLQAPTWSPSGRSLIFSRK----KDGDTGSKLYSI 421
              A  W P G+  + S +      G TG++LY I
Sbjct: 109 GDYA--WYPDGKKFLVSSEAYLLPTGWTGAQLYEI 141



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       I      G +E+ + +   +  P WS +G  L +++ K      +LY
Sbjct: 2   KVAFIRNHNLWVKI------GKKEKQITKGEYITGPKWSHNGEWLAYAKGKK-RNHLELY 54

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+   +  + + AS+ QW  
Sbjct: 55  RLK-DGKK--VTPSQSEASNYQWSP 76


>gi|118486469|gb|ABK95074.1| unknown [Populus trichocarpa]
          Length = 449

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 59/215 (27%), Gaps = 32/215 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKR----- 271
            +  ++  +A+ +  ++ I+R Y      D     + N     + A  +  NG +     
Sbjct: 110 SWHQHRHIIAFISGPNQVIVRDYEDSEGKDAC--VLSNGAQQDIRALEWRPNGGKSLSVA 167

Query: 272 -----ALISVQKDEAMDIYSVDLQS--NATER-----------LTNTLFINISA-SYSPD 312
                 + +               S      R           L +      SA S+SPD
Sbjct: 168 CKGGICIWAASYPGNPATVRPGAASSLGTLTRGSGGRWTLVDFLRSHSDEQTSAISWSPD 227

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +   S       ++ +        R             WSP GD   F       F 
Sbjct: 228 GRYLASASCESSSFTIWDVSQGLGTPIR---RGLGGISLLKWSPTGDYF-FAAKFDGTFY 283

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +       S+         +   TW P G  ++ +
Sbjct: 284 LWETNTWTSEPWS-STSGFVTGATWDPDGHIILIA 317



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/176 (12%), Positives = 58/176 (32%), Gaps = 17/176 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +L    D+      +SP+ + +A A+ +      ++ +   +    +R     S++   +
Sbjct: 210 FLRSHSDEQTSAISWSPDGRYLASASCESSS-FTIWDVSQGLGTPIRRGLGGISLL---K 265

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS--QIVFESDR 322
           +S  G     + + D    ++  +  ++     ++T      A++ PD     I F    
Sbjct: 266 WSPTGDY-FFAAKFDGTFYLWETNTWTSEP--WSSTSGFVTGATWDPDGHIILIAFSGSL 322

Query: 323 EGKEQLYVMQSNGSDQKRI--------SQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
                 +  +    D   +        +           W   G+ +A +   G+ 
Sbjct: 323 TLGSIHFSSKPPSLDAHLLPVDLPEITTMTGSEGIEKIAWDASGERLAVSYKGGDD 378


>gi|311748109|ref|ZP_07721894.1| Xaa-Pro dipeptidyl-peptidase [Algoriphagus sp. PR1]
 gi|126574753|gb|EAZ79134.1| Xaa-Pro dipeptidyl-peptidase [Algoriphagus sp. PR1]
          Length = 827

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 7/103 (6%)

Query: 299 NTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +  +I++S         +++F S+R+G    Y+   +G+ +++++     S         
Sbjct: 394 SNTYIDLSRPELVNGGEELIFWSERDGWGHFYLYAKDGTLKRQLTSGAFHSDRVERVDED 453

Query: 358 GDLIAFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQA 394
           G  + F     E+        +  +  DG   RLL E     +
Sbjct: 454 GRRLFFVANGREEGEDPYYEHLYSVSLDGGPIRLLNEGDFNHS 496



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 85/237 (35%), Gaps = 30/237 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---FRSMILAP-----RFSSNG- 269
           +S + ++      D+  +  ++++    D  P               P      +S    
Sbjct: 260 WSEDSEEFITQRSDERKVKDLWVLHNTRDPRPTLETYKYAMPGEKEQPISYLYHYSFESE 319

Query: 270 --KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF--ESDREG 324
             K   ++  KD+++ ++S    +       N    +  AS +  D  +  F   S    
Sbjct: 320 EMKNLPVATFKDQSISLWSTPAPA-------NARDDDFRASTWLGDEDEFYFGITSRDLK 372

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFD---PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           K  +     +   ++ + +++  +Y D   P     G+ + F           +  KDG+
Sbjct: 373 KVDIVRWNLSTDSKEVVIEERSNTYIDLSRPELVNGGEELIFWSERDGWGHFYLYAKDGT 432

Query: 382 QERLLVEDS--NLQAPTWSPSGRSLIFS---RKKDGDTGSK-LYSIDLNGRNETLIN 432
            +R L   +  + +       GR L F    R++  D   + LYS+ L+G    L+N
Sbjct: 433 LKRQLTSGAFHSDRVERVDEDGRRLFFVANGREEGEDPYYEHLYSVSLDGGPIRLLN 489



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 65/204 (31%), Gaps = 24/204 (11%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +RD       +  ++ +  Y      D+ +V ++   +    K +            S 
Sbjct: 344 NARDDDFRASTWLGDEDE-FYFGITSRDLKKVDIVRWNLSTDSKEVVIEERSNTYIDLSR 402

Query: 268 -----NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESD 321
                 G+  +   ++D     Y          +LT+  F  +       D  ++ F ++
Sbjct: 403 PELVNGGEELIFWSERDGWGHFYLYAKDGTLKRQLTSGAFHSDRVERVDEDGRRLFFVAN 462

Query: 322 --REGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTKFSGEKFAI 373
              EG++     LY +  +G    R+  + + ++     +  G      +++ +    ++
Sbjct: 463 GREEGEDPYYEHLYSVSLDGGPI-RLLNEGDFNHSS-DMNDAGTFFVNNYSRVNTTPVSV 520

Query: 374 -------GVMKKDGSQERLLVEDS 390
                   VM  + +    L    
Sbjct: 521 LQDRNGAKVMDLETADLSQLFAAG 544


>gi|119471345|ref|ZP_01613817.1| hypothetical protein ATW7_16902 [Alteromonadales bacterium TW-7]
 gi|119445621|gb|EAW26905.1| hypothetical protein ATW7_16902 [Alteromonadales bacterium TW-7]
          Length = 357

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 82/227 (36%), Gaps = 25/227 (11%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR------DQIL 214
           +I   + G+   F++  L +  +   G    +L     DG++ R + P +         L
Sbjct: 57  EIRDEVYGDTDTFSTPRL-MFWNKYKGSEVRTLWSSRLDGSDRRRIIPEKIFTQLEPAGL 115

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P  SP+ + +A + Y ++   R  L DT+  +     G          ++S+ +  + 
Sbjct: 116 HPPARSPDNRYIAISGYINDRATR-QLYDTKEKKLITMSGGGGYPWF--NWTSDSENVIF 172

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDREGKEQLYVMQ 332
                     ++  + +     LT    I+ S  A   P   + +        +  ++ +
Sbjct: 173 YSDG----KNFNYHVSTGE---LTPRPQIHHSGAAFLLPGDKEFLAIK----HDGFWIHK 221

Query: 333 SNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            NG   ++++     ++   +   SP G  +AF     E F    + 
Sbjct: 222 FNGEIVRKVNFGFPRAWEMKNHRISPDGKYLAFMTHGRENFHFHWVN 268



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 60/212 (28%), Gaps = 30/212 (14%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-------RSMILAPRFSSNGKRALISVQ 277
           ++ +        +R            +RI           + +  P  S + +   IS  
Sbjct: 73  RLMFWNKYKGSEVRTLWSSRLDGSDRRRIIPEKIFTQLEPAGLHPPARSPDNRYIAISGY 132

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            ++       D +      ++         +++ DS  ++F SD       +V     + 
Sbjct: 133 INDRATRQLYDTKEKKLITMSGGGGYPWF-NWTSDSENVIFYSD-GKNFNYHVSTGELTP 190

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-T 396
           + +I     A           + +A            + K +G   R +    N   P  
Sbjct: 191 RPQIHHSGAAFLLPG----DKEFLAIKHDG-----FWIHKFNGEIVRKV----NFGFPRA 237

Query: 397 W-------SPSGRSLIFSRKKDGDTGSKLYSI 421
           W       SP G+ L F      +      +I
Sbjct: 238 WEMKNHRISPDGKYLAFMTHGRENFHFHWVNI 269


>gi|312380754|gb|EFR26664.1| hypothetical protein AND_07114 [Anopheles darlingi]
          Length = 1479

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 59/150 (39%), Gaps = 18/150 (12%)

Query: 196  MDRDGANIR--YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
               DG  ++   +       ++  +FSP+  ++A  +   +D   +      +    +  
Sbjct: 1047 CGSDGFPLQALQVLNDHSDEVWFCKFSPDGLRLATGS---KDNTVIVWEVDPVKLLLRNK 1103

Query: 254  GNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINIS--- 306
             +F           +S + K   I+   D+  D++  D++    + +T  +   + S   
Sbjct: 1104 RSFEGHTYGVSYIAWSPDSKY-FIACGPDDCPDLWIWDVE--QEKLITKFSHSTDDSLTC 1160

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            A+++ D ++ V    R    Q Y++  +GS
Sbjct: 1161 AAFNRDGTRFVTGGTRG---QFYMVDLDGS 1187


>gi|301308400|ref|ZP_07214354.1| OmpA family protein [Bacteroides sp. 20_3]
 gi|300833870|gb|EFK64486.1| OmpA family protein [Bacteroides sp. 20_3]
          Length = 658

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 52/153 (33%), Gaps = 24/153 (15%)

Query: 299 NTLFINISASYSPDSSQIVFES---DREG--KEQLYVMQSNG-----SDQKRISQDKEAS 348
           NT +   + S+SPD + + +     D EG    ++Y+   +        +  I +D   +
Sbjct: 225 NTEYDEGTPSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTA 284

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQ-------ERLLVEDSNLQAPTWS 398
              P  SP G  + F   +   F    I   +  G+           +    +   P   
Sbjct: 285 LGHPSISPDGKYLYFVSDAVGGFGGKDIFRARVAGNDFGPMENLGEEINTPGDEMFPYVR 344

Query: 399 PSGRSLIFSRK-KDGDTGSKLYSI--DLNGRNE 428
               +L F+     G  G  L+    D  G+ +
Sbjct: 345 -DSVTLYFASNGHPGMGGLDLFKATQDSTGKWK 376



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 20/117 (17%)

Query: 344 DKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKD------GSQERLLVED-SN 391
           + E     P +SP G+ + +T             I +  +       G++  ++ +  + 
Sbjct: 225 NTEYDEGTPSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTA 284

Query: 392 LQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRN----ETL---INTPAYASDP 440
           L  P+ SP G+ L F      G  G  ++   + G +    E L   INTP     P
Sbjct: 285 LGHPSISPDGKYLYFVSDAVGGFGGKDIFRARVAGNDFGPMENLGEEINTPGDEMFP 341



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 39/135 (28%), Gaps = 21/135 (15%)

Query: 217 PRFSPNQQK--VAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILA---PRFSS 267
           P FSP+       Y   D E      + +    +       R    +  + A   P  S 
Sbjct: 233 PSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTALGHPSISP 292

Query: 268 NGKRALISVQKDEAM---DIYSVDLQS---NATERL---TNTLFINISASYSPDSSQIVF 318
           +GK               DI+   +        E L    NT    +   Y  DS  + F
Sbjct: 293 DGKYLYFVSDAVGGFGGKDIFRARVAGNDFGPMENLGEEINTPGDEMFP-YVRDSVTLYF 351

Query: 319 ESDREGKEQLYVMQS 333
            S+  G   +  +  
Sbjct: 352 ASN--GHPGMGGLDL 364



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 28/90 (31%), Gaps = 14/90 (15%)

Query: 262 APRFSSNGKRALISV-----QKDEAMDIYSVDLQS---NATERLTNTLFINI---SASYS 310
            P FS +G     +      +     +IY     S       R T            S S
Sbjct: 232 TPSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTALGHPSIS 291

Query: 311 PDSSQIVFESDREGKEQ---LYVMQSNGSD 337
           PD   + F SD  G      ++  +  G+D
Sbjct: 292 PDGKYLYFVSDAVGGFGGKDIFRARVAGND 321


>gi|256839169|ref|ZP_05544679.1| outer membrane protein OmpA family protein [Parabacteroides sp.
           D13]
 gi|256740088|gb|EEU53412.1| outer membrane protein OmpA family protein [Parabacteroides sp.
           D13]
          Length = 658

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 52/153 (33%), Gaps = 24/153 (15%)

Query: 299 NTLFINISASYSPDSSQIVFES---DREG--KEQLYVMQSNG-----SDQKRISQDKEAS 348
           NT +   + S+SPD + + +     D EG    ++Y+   +        +  I +D   +
Sbjct: 225 NTEYDEGTPSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTA 284

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQ-------ERLLVEDSNLQAPTWS 398
              P  SP G  + F   +   F    I   +  G+           +    +   P   
Sbjct: 285 LGHPSISPDGKYLYFVSDAVGGFGGKDIFRARVAGNDFGPMENLGEEINTPGDEMFPYVR 344

Query: 399 PSGRSLIFSRK-KDGDTGSKLYSI--DLNGRNE 428
               +L F+     G  G  L+    D  G+ +
Sbjct: 345 -DSVTLYFASNGHPGMGGLDLFKATQDSTGKWK 376



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 20/117 (17%)

Query: 344 DKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKD------GSQERLLVED-SN 391
           + E     P +SP G+ + +T             I +  +       G++  ++ +  + 
Sbjct: 225 NTEYDEGTPSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTA 284

Query: 392 LQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRN----ETL---INTPAYASDP 440
           L  P+ SP G+ L F      G  G  ++   + G +    E L   INTP     P
Sbjct: 285 LGHPSISPDGKYLYFVSDAVGGFGGKDIFRARVAGNDFGPMENLGEEINTPGDEMFP 341



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 39/135 (28%), Gaps = 21/135 (15%)

Query: 217 PRFSPNQQK--VAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILA---PRFSS 267
           P FSP+       Y   D E      + +    +       R    +  + A   P  S 
Sbjct: 233 PSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTALGHPSISP 292

Query: 268 NGKRALISVQKDEAM---DIYSVDLQS---NATERL---TNTLFINISASYSPDSSQIVF 318
           +GK               DI+   +        E L    NT    +   Y  DS  + F
Sbjct: 293 DGKYLYFVSDAVGGFGGKDIFRARVAGNDFGPMENLGEEINTPGDEMFP-YVRDSVTLYF 351

Query: 319 ESDREGKEQLYVMQS 333
            S+  G   +  +  
Sbjct: 352 ASN--GHPGMGGLDL 364



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 28/90 (31%), Gaps = 14/90 (15%)

Query: 262 APRFSSNGKRALISV-----QKDEAMDIYSVDLQS---NATERLTNTLFINI---SASYS 310
            P FS +G     +      +     +IY     S       R T            S S
Sbjct: 232 TPSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTALGHPSIS 291

Query: 311 PDSSQIVFESDREGKEQ---LYVMQSNGSD 337
           PD   + F SD  G      ++  +  G+D
Sbjct: 292 PDGKYLYFVSDAVGGFGGKDIFRARVAGND 321


>gi|255602478|ref|XP_002537861.1| conserved hypothetical protein [Ricinus communis]
 gi|223514803|gb|EEF24522.1| conserved hypothetical protein [Ricinus communis]
          Length = 269

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 271 RALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           R   S+       D+Y  DL   +  R+        + ++SPD +++ F S R
Sbjct: 101 RPAFSMAATGRRRDLYLYDLAGGSLHRVGRGEGTYANPAWSPDGTRLYFTSAR 153



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 2/80 (2%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG + R L     Q     R   +  + A++         +YL D        R+G    
Sbjct: 76  DGCHHRRLRRHGQQRQHVVRRMHD-LRPAFSMAATGRRRDLYLYDLAGGSL-HRVGRGEG 133

Query: 259 MILAPRFSSNGKRALISVQK 278
               P +S +G R   +  +
Sbjct: 134 TYANPAWSPDGTRLYFTSAR 153



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 2/54 (3%)

Query: 315 QIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +  F     G+ + LY+    G    R+    E +Y +P WSP G  + FT   
Sbjct: 101 RPAFSMAATGRRRDLYLYDLAGGSLHRV-GRGEGTYANPAWSPDGTRLYFTSAR 153



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 17/142 (11%), Positives = 44/142 (30%), Gaps = 24/142 (16%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +R +++    + +D+  VD +     + T+           P+  ++          ++ 
Sbjct: 35  RRIVVAPLVPDHVDLQVVDGEG----QRTDGQ---------PEQGRVA-----GRGPRV- 75

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
               +G   +R+ +  +                    +G +  + +    G     +   
Sbjct: 76  ----DGCHHRRLRRHGQQRQHVVRRMHDLRPAFSMAATGRRRDLYLYDLAGGSLHRVGRG 131

Query: 390 -SNLQAPTWSPSGRSLIFSRKK 410
                 P WSP G  L F+  +
Sbjct: 132 EGTYANPAWSPDGTRLYFTSAR 153


>gi|83766398|dbj|BAE56541.1| unnamed protein product [Aspergillus oryzae]
          Length = 331

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 60/174 (34%), Gaps = 12/174 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VS      +  +D +G  IRY   ++         S + + +A       +   VY+  
Sbjct: 143 GVSQDGHIRVWDLDANGEQIRY-YETKGSFGTCIDLSADGRFIA----SGHENGSVYIFS 197

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLF 302
           T   R P  +      + A  FS  GK         ++  I   D  S      L     
Sbjct: 198 TETGRMPFSLSGLVKPVRAVAFSPGGKFLA---AAGDSNVIVLYDTSSGEQVANLPGHSA 254

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             +S S+S     ++  S  +GK +++ + +          + E + ++  W P
Sbjct: 255 WVLSLSWSHTGEYLLSGSF-DGKVKVWSIDTRTCVAT--HSETERAVWNVKWLP 305



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 60/179 (33%), Gaps = 26/179 (14%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G    +    D            NA    T    I    + S D   +   S  +G  ++
Sbjct: 100 GGEIRVWSCHDGNWSENKTVSAGNAGS--TGVWAI----ALSGDGQYLAGVSQ-DGHIRV 152

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           + + +NG +Q R  + K +       S  G  IA    +G    + +   +    R+   
Sbjct: 153 WDLDANG-EQIRYYETKGSFGTCIDLSADGRFIASGHENGS---VYIFSTETG--RMPFS 206

Query: 389 DSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            S L  P     +SP G+ L  +   +      +   D +   E + N P ++    WV
Sbjct: 207 LSGLVKPVRAVAFSPGGKFLAAAGDSN-----VIVLYDTS-SGEQVANLPGHS---AWV 256


>gi|16330503|ref|NP_441231.1| hypothetical protein slr1721 [Synechocystis sp. PCC 6803]
 gi|1652994|dbj|BAA17911.1| slr1721 [Synechocystis sp. PCC 6803]
          Length = 492

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/235 (17%), Positives = 78/235 (33%), Gaps = 24/235 (10%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
             N  +L ++         + L V    G N R L    ++ +  P    N   +A    
Sbjct: 243 AANGSMLVIARENAQNSADSGLWVAPS-GENPRPLGIRAEKFIVGP----NGNFLAVGQ- 296

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQ 290
            +  +  + L+               +M  A  FS++GK+ L+S Q  D +  +   DLQ
Sbjct: 297 -EGGVGLIPLIPEAGAPH-----FLEAMEQALDFSADGKQLLLSQQNPDFSHSLIVYDLQ 350

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFE-----SDREG-----KEQLYVMQSNGSDQKR 340
                 +    +  IS  + P S    +        REG     +  L V+       + 
Sbjct: 351 ERTQREVLRGPYPLISCRFDPRSQPRAYCLQADFIQREGEPVQPEPYLAVINLTDGQARP 410

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +         D   +P G  + F + +     +G      + +R +V+      P
Sbjct: 411 LLALPNYPEVDLTVAPDGLGLMFDQVATGP-TLGSHDLLTNSQRSIVDGRVWLLP 464


>gi|87301345|ref|ZP_01084186.1| hypothetical protein WH5701_15706 [Synechococcus sp. WH 5701]
 gi|87284313|gb|EAQ76266.1| hypothetical protein WH5701_15706 [Synechococcus sp. WH 5701]
          Length = 176

 Score = 50.8 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 40/124 (32%), Gaps = 5/124 (4%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSS 314
                P  S  G+   +   +D    +  +DL  N    L      +      S   +  
Sbjct: 54  GSNRDPSLS--GRWLALISGRDGRERVELIDLDQNRPVPLPGLNRPDAQPLNISVDANGE 111

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++     R+G+ +L + + +    + +  D          S  G ++A        + + 
Sbjct: 112 RMALIRQRDGRTELALYRRSRESLQPLQLDPPGVPRQAQLSADGRMLAVQVSRAGLWQVD 171

Query: 375 VMKK 378
           +++ 
Sbjct: 172 LIEL 175


>gi|296201999|ref|XP_002748403.1| PREDICTED: notchless protein homolog 1 isoform 1 [Callithrix
           jacchus]
          Length = 485

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +      T   T       
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---GTETPHFTCKGHRHW 158

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEA------SYFDPVWS 355
            +S S+SPD  ++       G    Q+ +   +   Q   +    +      S+     +
Sbjct: 159 VLSISWSPDGKKLA-----SGCKNGQILLWDPSTGKQVGRTLTGHSKWITGLSWEPLHVN 213

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + +     G  ER+L     ++    W   G  L++S  +D
Sbjct: 214 PECRYVASSSKDGS---VRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 266



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 396

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAIDLPGH 455

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 456 ADEVYAVDWSPDGQRVA 472



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 131 SGSGDTTVRFWDLGTETPHFTCKGHRHWVLSISWSPDGKKLA---SGCKNGQILLWDPST 187

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ I+           LT  
Sbjct: 188 GKQVGRTLTGHSKWITGLSWEPLHVNPECRYVA-SSSKDGSVRIWDT-TAGRCERILTGH 245

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 246 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 302 RTGAFEPAEASVNPQDLQGSLQEVKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 358

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 359 AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 396

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 397 KLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAI 450

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 451 DLPGHADEVYAVDWSPDGQRVA 472



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 49/158 (31%), Gaps = 22/158 (13%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            A  R T++L  +  A    ++SP    +   S   G   +              +    
Sbjct: 101 RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGS---GDTTVRFWDLGTETPHFTCKGHRH 157

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVE-----DSNLQAP-TWSP 399
                 WSP G  +A    +G    I +      ++  R L             P   +P
Sbjct: 158 WVLSISWSPDGKKLASGCKNG---QILLWDPSTGKQVGRTLTGHSKWITGLSWEPLHVNP 214

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             R +  S  KDG    +++     GR E ++     +
Sbjct: 215 ECRYVA-SSSKDGSV--RIWDTTA-GRCERILTGHTQS 248


>gi|288817710|ref|YP_003432057.1| hypothetical protein HTH_0391 [Hydrogenobacter thermophilus TK-6]
 gi|288787109|dbj|BAI68856.1| conserved hypothetical protein [Hydrogenobacter thermophilus TK-6]
 gi|308751308|gb|ADO44791.1| 40-residue YVTN family beta-propeller repeat protein
           [Hydrogenobacter thermophilus TK-6]
          Length = 327

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 57/186 (30%), Gaps = 13/186 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYL--MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            P +  +     +   + + Y+  +DT+  +   R    +       FS  G+  L++  
Sbjct: 100 HPKRDLLFVTYEETGKVEKAYIVAIDTKNWKEAFRFEGGKESEGM-AFSKEGRYLLVT-- 156

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSN 334
            +    I   DL +    R  +             SPD          E    L ++ +N
Sbjct: 157 NEGENSISVYDLDTKKKLRDVDLKSYGDRPRGIVSSPDGKYYAVT--FENSNGLLLLDNN 214

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
               + +  D  A  +   +SP G  I    F   K  I   K    +  +         
Sbjct: 215 FKVIRSVKTD--AGPYGVTFSPDGSEIIVASFRAGKLDIFDSKTLTKKSSVET-GKRCWH 271

Query: 395 PTWSPS 400
            T+S  
Sbjct: 272 FTYSSD 277



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 71/197 (36%), Gaps = 13/197 (6%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +A A+   + + ++ ++ T   +  + +    +     +         ++ ++   
Sbjct: 60  DGKYLAVAS---KKLGKLLVVSTESWKVVREVPLGENPEF-VKVHPKRDLLFVTYEETGK 115

Query: 282 MD-IYSVDLQSNATERLTNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           ++  Y V + +   +          +   ++S +   ++  +  EG+  + V   +   +
Sbjct: 116 VEKAYIVAIDTKNWKEAFRFEGGKESEGMAFSKEGRYLLVTN--EGENSISVYDLDTKKK 173

Query: 339 KRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            R    K         V SP G   A T  +     + ++  +    R +  D+     T
Sbjct: 174 LRDVDLKSYGDRPRGIVSSPDGKYYAVTFENSNG--LLLLDNNFKVIRSVKTDAGPYGVT 231

Query: 397 WSPSGRSLIFSRKKDGD 413
           +SP G  +I +  + G 
Sbjct: 232 FSPDGSEIIVASFRAGK 248


>gi|281338343|gb|EFB13927.1| hypothetical protein PANDA_009344 [Ailuropoda melanoleuca]
          Length = 729

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 17/131 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------DDEDILRVYL 241
             +++L  +D  G     L+      +  PR SP+Q ++ Y  Y           L +Y 
Sbjct: 274 NRRSALYYVDLTGGQCELLSDD-SLAVSSPRLSPDQCRIVYLRYPSLVPHHQCSQLCLYD 332

Query: 242 MDTRIDRA-----PKRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQS 291
             T++        P+++G   S I         +S++ +R +    +    D++ VD Q+
Sbjct: 333 WYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFVVDTQT 392

Query: 292 NATERLTNTLF 302
            +   LT    
Sbjct: 393 GSVTSLTAGGS 403



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 63/188 (33%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D +  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 221 LCVLDVESGNISVLEGVPESVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRFCTNRRSALY 280

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNA-- 293
            +D    +  + + +    + +PR S +  R +               +   D  +    
Sbjct: 281 YVDLTGGQC-ELLSDDSLAVSSPRLSPDQCRIVYLRYPSLVPHHQCSQLCLYDWYTKVTS 339

Query: 294 ------TERLT-NTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  N   I  S      +S DS ++VF+S +  ++ L+V+ +       ++
Sbjct: 340 VVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFVVDTQTGSVTSLT 399

Query: 343 QDKEASYF 350
                  +
Sbjct: 400 AGGSGGSW 407



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 39/143 (27%), Gaps = 21/143 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----- 326
                 +     +Y VDL     E L++      S   SPD  +IV+             
Sbjct: 269 IRFCTNR--RSALYYVDLTGGQCELLSDDSLAVSSPRLSPDQCRIVYLRYPSLVPHHQCS 326

Query: 327 QLYVMQ--------SNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIG 374
           QL +                +++ ++    Y        WS     + F      +  + 
Sbjct: 327 QLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLF 386

Query: 375 VMKKDGSQERLLVEDSNLQAPTW 397
           V+         L    +    +W
Sbjct: 387 VVDTQTGSVTSLTAGGSGG--SW 407


>gi|145612643|ref|XP_367348.2| hypothetical protein MGG_07273 [Magnaporthe oryzae 70-15]
 gi|145019777|gb|EDK04005.1| hypothetical protein MGG_07273 [Magnaporthe oryzae 70-15]
          Length = 608

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 77/204 (37%), Gaps = 31/204 (15%)

Query: 200 GANIRYLTPSRDQ---ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN- 255
           GA  ++   S DQ    +    FSP+   +     D     R++L D +     + IG+ 
Sbjct: 175 GAPFKFAAKSSDQHTGFVLGTAFSPDGTYLVTVGQDK----RIHLYDGKTGEHQREIGSG 230

Query: 256 -FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             +  + A  ++ + KR  ++   D+ + I+  D++S  T R T  L      +  PD  
Sbjct: 231 EHKGSVFAVAWAPDSKR-FVTASADQTVRIW--DVESGKTTR-TWRLGAEDGVASVPDQQ 286

Query: 315 -QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             + + + R  K+ L +  S   D   +S+  +A             I      G   +I
Sbjct: 287 VGVAWPAGR--KDGLIISLSLSGDLNYLSEGSDAPV----------KIV----QGHNKSI 330

Query: 374 GVMKKDGSQERLLVEDSNLQAPTW 397
             M   GSQ  L     + +   W
Sbjct: 331 TAMNT-GSQGSLFTGSFDGRVCRW 353



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 68/240 (28%), Gaps = 41/240 (17%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
             +++AYA+        +++         K+     +     RFS +G         D +
Sbjct: 28  KGERIAYAS-----GKSIFVRSIDNPEICKQYVGHTAATTVARFSPSG---FYIASGDVS 79

Query: 282 MDIYSVD----LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             +   D    + +     + +    ++  ++  DS +I+   D   +    +   +G+ 
Sbjct: 80  GQVRVWDAVEAVNTKGEYHIISGRINDV--AWDGDSQRIIAVGDGRERFGHCITADSGNS 137

Query: 338 QKRISQ----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
              IS            ++        S  G ++      G  F       D        
Sbjct: 138 VGEISGHSKVINAVAMRQQRPLRAATVSDDGSMVFLH---GAPFKFAAKSSD-------Q 187

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP---AYASDPQWVG 444
               +    +SP G  L+       D    LY     G ++  I +           W  
Sbjct: 188 HTGFVLGTAFSPDGTYLV---TVGQDKRIHLYD-GKTGEHQREIGSGEHKGSVFAVAWAP 243


>gi|115497266|ref|NP_001068737.1| aladin [Bos taurus]
 gi|111305454|gb|AAI20419.1| Achalasia, adrenocortical insufficiency, alacrimia (Allgrove,
           triple-A) [Bos taurus]
 gi|296487909|gb|DAA30022.1| Aladin [Bos taurus]
          Length = 556

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  D  D +RVY  ++ I   P      +  + A  +       L    
Sbjct: 158 AWHPHTNKFAVALLD--DSVRVYNANSTI--VPSLKHRLQRNVAALAWKPLSASVLAVAC 213

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 214 QS-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIL 270

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +   +     + +WSP G  +  T  S   F +   +     ER     
Sbjct: 271 VWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVLATTPS-AVFRVWEAQMWT-CERWPTLS 328

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSPSG  L+F+
Sbjct: 329 GRCQTGCWSPSGNRLLFT 346


>gi|291241226|ref|XP_002740511.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 496

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 82/214 (38%), Gaps = 26/214 (12%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
                +  +    +DIL++        + P + G   S+   P     G + +++  +D+
Sbjct: 170 HTGDYLTTSDKLTKDILQIKRCTHANKQKPTQ-GKIESVEFHP-----GAQVILTAGRDQ 223

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            ++++ VD ++N   +   ++F+         ++ D  Q+V  ++       YV      
Sbjct: 224 TLNLFQVDGRTNPKIQ---SVFVEDFPIRTAHFTADGEQVVMSANM---RCFYVYDMMAG 277

Query: 337 DQKRISQDK---EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
              RI   K   E +      SP G  I F    G  + +    K+      L  + ++ 
Sbjct: 278 KVIRIPDIKGIQERNLTTFKISPDGKYIVFLGSYGYMYVLSAKNKE--WITTLKMNGSVD 335

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           A  ++  G   ++S   DG    ++Y  D+N R 
Sbjct: 336 AIAFNDDGSR-MYSHGDDG----EVYIWDMNSRR 364


>gi|242040179|ref|XP_002467484.1| hypothetical protein SORBIDRAFT_01g028970 [Sorghum bicolor]
 gi|241921338|gb|EER94482.1| hypothetical protein SORBIDRAFT_01g028970 [Sorghum bicolor]
          Length = 470

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 64/196 (32%), Gaps = 9/196 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+ +   Y          V            +I    + I   R+S + +  L + + 
Sbjct: 55  WAPDSE---YILCGLYKRPMVQAWSLSQPDWTCKIDEGPAGIAYARWSPDSRHILTTSEF 111

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++S+   +    +        +S  ++ D       + R+ K+ + ++  +  + 
Sbjct: 112 QLRLTVWSLVNTACVHVQWPKHGSKGVS--FTKDGKFAAICTRRDCKDYINLLSCHSWEI 169

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSN-LQAP 395
             +            WSP    I     S  ++ I +   DG    + L  E    ++  
Sbjct: 170 MTVFAVDTVDLAGVEWSPDDSAIV-VWDSLLEYKILIYSPDGRCLFKYLAYESGLGVKTV 228

Query: 396 TWSPSGRSLIFSRKKD 411
            WSP G+ L       
Sbjct: 229 AWSPCGQFLAVGSYDQ 244



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 54/155 (34%), Gaps = 13/155 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+SP+ + +   +   E  LR+ +                       F+ +GK A I  +
Sbjct: 97  RWSPDSRHILTTS---EFQLRLTVWSLVNTACVHVQWPKHGSK-GVSFTKDGKFAAICTR 152

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDREGKEQLYVMQS 333
           +D    I  +   S     +     ++        +SPD S IV   D   + ++ +   
Sbjct: 153 RDCKDYINLLSCHS---WEIMTVFAVDTVDLAGVEWSPDDSAIV-VWDSLLEYKILIYSP 208

Query: 334 NGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +G    K ++ +         WSP G  +A   + 
Sbjct: 209 DGRCLFKYLAYESGLGVKTVAWSPCGQFLAVGSYD 243


>gi|218887643|ref|YP_002436964.1| hypothetical protein DvMF_2557 [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758597|gb|ACL09496.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 451

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 42/296 (14%), Positives = 88/296 (29%), Gaps = 55/296 (18%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   S +   +  V++ + ++    M  DG     L  + +        SP+ ++ A   
Sbjct: 129 GFIWSLLHGPAGRVIAAVQQDMRYGMIVDGEPWETLYENANNF----AISPDGRRTAAVV 184

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS--NGKRALISVQKDEAMDIYSVD 288
                         R   +    G          ++   + +   ++ Q       YSV 
Sbjct: 185 QTVPLGQADIETFVRGVYSVAVDGEAWGHNFMNVWTPVFDNRNDRVAAQVRLTHAEYSVA 244

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +          T        + P +  +     ++G+   + M  +G+    + + +   
Sbjct: 245 VNG---TLWPATFPCVWEPCFDPATGAVAAPVRKDGR---WGMALDGT---LLWEARFFQ 295

Query: 349 YFDPVWSPQGDLI-AFTKFSGEKFAIG----------------VMKKDGSQERLLVEDSN 391
            + P WSP G  + A        F +                 V+  DG++   L  + N
Sbjct: 296 CWSPAWSPDGRHLWAIVAPRYGSFTVARDAAPWPFTAPVITDLVLSPDGTRAAALASNDN 355

Query: 392 L------------------QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                                P +SP GR +    ++ G       ++ L+GR   
Sbjct: 356 AAWQVVVDGVPWPGKWDMAWRPVFSPCGRHVAVRVREAGRE-----TVLLDGRPWR 406



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 22/177 (12%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            + +V + + K+    M  DG     L  +R    + P +SP+ + +            V
Sbjct: 265 ATGAVAAPVRKDGRWGMALDGT---LLWEARFFQCWSPAWSPDGRHLWAIVAPRYGSFTV 321

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                        I +          S +G RA      D A     VD           
Sbjct: 322 ARDAAPWPFTAPVITDL-------VLSPDGTRAAALASNDNAAWQVVVDG-----VPWPG 369

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
              +     +SP    +       G+E    +  +G    R  +D   + ++PV+ P
Sbjct: 370 KWDMAWRPVFSPCGRHVAVRVREAGRE---TVLLDG----RPWRDGFTTAWNPVFGP 419


>gi|104779671|ref|YP_606169.1| prolyl oligopeptidase [Pseudomonas entomophila L48]
 gi|95108658|emb|CAK13352.1| putative prolyl oligopeptidase [Pseudomonas entomophila L48]
          Length = 602

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 4/95 (4%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +VF ++R+  +Q+Y    +G+  + ++ D++  Y D  W   G L+A  +   E+  
Sbjct: 78  GDAVVFVNERD--QQVYRQALDGTAPRALTHDEQCRYGDVQWH-DGVLLAVEERHAERVE 134

Query: 373 IGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIF 406
             ++  +  +  +L E ++   +PT S  GR L +
Sbjct: 135 HRLVAFEEGRRTVLAEGADFYASPTLSNDGRRLAW 169



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 25/218 (11%), Positives = 65/218 (29%), Gaps = 29/218 (13%)

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           +Q+  +    +    R + H       +        ++  +L   E   +  +++ L   
Sbjct: 89  QQVYRQALDGTA--PRALTHD------EQCRYGDVQWHDGVLLAVEERHAERVEHRLVAF 140

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM-------DTRIDRA 249
           +      R +          P  S + +++A+  +D                  + +   
Sbjct: 141 E---EGRRTVLAEGADFYASPTLSNDGRRLAWVEWDRPAQPWTVTRLMCREREASGVWGV 197

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-- 307
            + I      +  PRF ++G   L  +   +       ++     + L      +  A  
Sbjct: 198 ARCIAGLDESLQQPRFDADGH--LYCLSDRDGFWQPWGEVA-GHWQALPAAPADHAGAPW 254

Query: 308 -----SYSPDSSQIVFES-DREGKEQLYVMQSNGSDQK 339
                ++ P        S   +G  QL +   +G  ++
Sbjct: 255 QMGASTWLPFGPGQYLASWFEDGFGQLGLRNFDGEMER 292


>gi|326429151|gb|EGD74721.1| hypothetical protein PTSG_06082 [Salpingoeca sp. ATCC 50818]
          Length = 2399

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 61/195 (31%), Gaps = 18/195 (9%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +          L    +SP   +V        +   V + D +       +   +  + +
Sbjct: 1267 VERRFHGHHHSLRAVAWSPRHNRVV----AGGEAGIVLMWDVQSGALLFTLHAHQDWVTS 1322

Query: 263  PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             RFS +G   L S  +      +  DL S    R + T    +     P    + F +  
Sbjct: 1323 LRFSHDGTDLLFSTDRAGCCVGW--DLSSCGLRR-SFTPAATV-----PAGKTVAFAAFG 1374

Query: 323  EGKEQL-YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G         ++  +   I+   +AS+ D  +   G  I      G+       +++  
Sbjct: 1375 GGSSAASCAANNDDENTTHIT-GADASHGDGDFGADGCYI----RQGDHDHTLEHEQEEG 1429

Query: 382  QERLLVEDSNLQAPT 396
            + R    D    +P+
Sbjct: 1430 RARYFTFDECATSPS 1444



 Score = 37.3 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 7/96 (7%)

Query: 320  SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM-KK 378
            S   G  Q  V  +     +R       S     WSP+ + +     +G +  I +M   
Sbjct: 1249 SGVTGVMQSPVAAAVNGVVERRFHGHHHSLRAVAWSPRHNRVV----AGGEAGIVLMWDV 1304

Query: 379  DGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDG 412
                    +        +  +S  G  L+FS  + G
Sbjct: 1305 QSGALLFTLHAHQDWVTSLRFSHDGTDLLFSTDRAG 1340


>gi|312194326|ref|YP_004014387.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EuI1c]
 gi|311225662|gb|ADP78517.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EuI1c]
          Length = 773

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 77/232 (33%), Gaps = 25/232 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   +A A+ +    L       +    P       + ++A  F+  G+    S  ++ 
Sbjct: 474 PDGSTLAAASQNGTVTLWDISRPAKPRALPSLSTGDTTGMMAAAFAPGGRTLA-SGSRNG 532

Query: 281 AMDIYSVDLQSNATERLTNTL-FINISASYS----PDSSQIVFESDREGKEQLYVMQSNG 335
            + ++ V     A  RL   +       ++S    P  + +      +G   + V   + 
Sbjct: 533 TVQLWDVS-NPGAARRLGAPIVAAGGGPAWSVGFAPVGNLLA---SGDGNGTVRVWNVSS 588

Query: 336 SDQKRISQDKEASYFDPVW----SPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVE 388
                ++          VW    SP G ++A     G      V       +    L V+
Sbjct: 589 PQAPVMAGQPFHFDGGQVWSVAFSPDGSILATAGQDGSVGLWDVSNPQAQPQPLGTLPVQ 648

Query: 389 DSN----LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             N    +++  ++P G +LI       D   +L+ I +      L+  P+ 
Sbjct: 649 SGNGVKAVESLAFTPDGHTLITGSI---DHAVRLWDITVP-SVPRLLAAPSQ 696


>gi|297285654|ref|XP_002802847.1| PREDICTED: WD repeat-containing protein 51A-like isoform 3 [Macaca
           mulatta]
          Length = 359

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 84/233 (36%), Gaps = 18/233 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 31  TKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAITCVNFSPSGHLLASGSRD--KTVRIW 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+   ++   D+ + +++   Q      L+  
Sbjct: 89  VPNVKGESTAFR--AHTATVRSVHFCSDGQS-FVTASDDKTVKVWATHRQ-KFLFSLSQH 144

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +   +  +      +         + P G  
Sbjct: 145 INWVRCAKFSPDGRLIVSASD---DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTC 201

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
           IA            V        RLL    +  + +   ++ PSG  LI +  
Sbjct: 202 IAAAGMDNTVKVWDV-----RTHRLLQHYHLHSAAVNGLSFHPSGNYLITASS 249



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 33/261 (12%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           ++R   H   D I        G            + SG    ++ +   +         +
Sbjct: 54  AYRFTGHK--DAITCVNFSPSG----------HLLASGSRDKTVRIWVPNVKGESTAFRA 101

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    F  + Q    A+ D      V +  T   +    +    + +   +FS +G
Sbjct: 102 HTATVRSVHFCSDGQSFVTASDDK----TVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 157

Query: 270 KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R ++S   D+ + ++  D  S                  + P  + I           +
Sbjct: 158 -RLIVSASDDKTVKLW--DKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM---DNTV 211

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V         +      A+     + P G+ +           + +M     + RLL  
Sbjct: 212 KVWDVRTHRLLQHYHLHSAAVNGLSFHPSGNYLITASSDSTLKILDLM-----EGRLLYT 266

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
               Q P       ++ FSR 
Sbjct: 267 LHGHQGPA-----TTVAFSRT 282


>gi|163788945|ref|ZP_02183390.1| putative orphan protein ; putative signal peptide [Flavobacteriales
           bacterium ALC-1]
 gi|159876182|gb|EDP70241.1| putative orphan protein ; putative signal peptide [Flavobacteriales
           bacterium ALC-1]
          Length = 538

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 80/229 (34%), Gaps = 21/229 (9%)

Query: 227 AYATYDDEDI-LRVYLMDTRID------RAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            + ++        V+L D   +      +  K I N       P F  + +    +  ++
Sbjct: 11  FFTSFIFSQSNTEVFLFDLETNNSKIELKNGKNISNNEGYDNQPSF-IDDRYIAFASTRN 69

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSNGSDQ 338
              DI   D + +    +  T     S    P+ +++     D++GK++LY    +    
Sbjct: 70  GQTDIAKYDTRYSGRIWVNFTEGGEYSPLRIPNKNEVSAVRLDKDGKQRLYSYSLSNGQS 129

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTW 397
             +  D   +Y+   W      I      G +  + V    DG+  +  ++       ++
Sbjct: 130 TELINDLVVAYY--TWYNDNT-IVSAVIEGNELNLYVSNLNDGTNTKYALKVGR----SF 182

Query: 398 S--PSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWV 443
              P+   + F   K+ +   ++ S +   G  + + NT     D  W+
Sbjct: 183 HKIPNSDLISFVS-KEKENQWQIKSFNPKTGTIKVIANTLDNIEDICWL 230


>gi|255010279|ref|ZP_05282405.1| dipeptidyl peptidase IV [Bacteroides fragilis 3_1_12]
          Length = 691

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 83/236 (35%), Gaps = 48/236 (20%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDT---------------RIDRAPKRIGNFRS----- 258
           +SP+   +A+   D+  + +  L+D                 +     ++G +       
Sbjct: 172 WSPSGNLLAFYRMDESMVAQYPLVDITAPIAEVNNIRYPMAGMTSHQVKVGIYNPATGKS 231

Query: 259 ---MILAP--------RFSSNGKRA-LISVQKDEA-MDIYSVDLQSNATERLTNTLFIN- 304
                  P         ++ + K   LI + +D+    +   + ++            + 
Sbjct: 232 IYLNAGDPTDRYFTNISWAPDEKSLYLIELNRDQNHAKLCQYNAETGDLMATLFEEENDK 291

Query: 305 -ISAS----YSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +       + P DSS+ +++S ++G   LY+  ++G   +++++ +       V     
Sbjct: 292 YVEPQEPIIFLPWDSSKFIYQSQKDGFSHLYLYDTSGKQLRQLTEGE--WLVKEVLGFDA 349

Query: 359 DL----IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSR 408
                 IA T+FS  +  +  +         L     + +   SPSGR LI  +S 
Sbjct: 350 KKKEIIIASTEFSPLQSNLFRVDIKTGARTPLGSGEGVHSGKLSPSGRYLIDQYSS 405



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/189 (13%), Positives = 58/189 (30%), Gaps = 24/189 (12%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKE 326
           +  + +   QKD    +Y  D       +LT   ++      +     +I+  S      
Sbjct: 305 DSSKFIYQSQKDGFSHLYLYDTSGKQLRQLTEGEWLVKEVLGFDAKKKEIIIASTEFSPL 364

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--FTKFSGEKFAIGVMKK-DGSQE 383
           Q  + + +     R              SP G  +   ++  S  + +I ++    G   
Sbjct: 365 QSNLFRVDIKTGARTPLGSGEGVHSGKLSPSGRYLIDQYSSPSVPR-SINILDVQSGKSV 423

Query: 384 RLLVED---SNLQAPTW------SPSGRSLIFSR-------KKDGDTGSKLYSIDLNGRN 427
            LL      +  + P+       +  G++ ++ R         +    + +Y     G  
Sbjct: 424 NLLTAADPFAGYKMPSIETGTIKAADGKTDLYYRLVKPADFDPNKKYPAIIYVY---GGP 480

Query: 428 ETLINTPAY 436
              + T  +
Sbjct: 481 HAQMVTNGW 489


>gi|241604625|ref|XP_002405923.1| THO complex subunit, putative [Ixodes scapularis]
 gi|215502590|gb|EEC12084.1| THO complex subunit, putative [Ixodes scapularis]
          Length = 370

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 66/186 (35%), Gaps = 12/186 (6%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           + +      +  K I   +  I    +S++  R L+S   D+ + I+ V       + L 
Sbjct: 105 IKIWGAYDGKFEKTISGHKLGISDVAWSTD-SRLLVSASDDKTLKIWEVS-SGKCLKTLK 162

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                    +++P S+ IV  S     E + +         +             ++  G
Sbjct: 163 GHSNYVFCCNFNPQSNLIVSGSF---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDG 219

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGS 416
            LI  + + G    I      G   + L++D N  +    +SP+G+ ++ +     D   
Sbjct: 220 SLIVSSSYDG-LCRIW-DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTL 274

Query: 417 KLYSID 422
           KL+   
Sbjct: 275 KLWDYS 280


>gi|257077153|ref|ZP_05571514.1| tricorn protease [Ferroplasma acidarmanus fer1]
          Length = 1019

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 3/64 (4%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQLYVMQSNGSDQK 339
           D++  ++ +   ERLTN L I  +   SPD   + F            +Y +     +  
Sbjct: 17  DLWKYNINTKNIERLTNNLGIVTNPKISPDKRYVYFRLMTGKSGESSDIYSIDLERGNLT 76

Query: 340 RISQ 343
           R++ 
Sbjct: 77  RVTY 80



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/206 (16%), Positives = 70/206 (33%), Gaps = 35/206 (16%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            +  +R+ N   ++  P+ S + +       + +  E+ DIYS+DL+     R+T     
Sbjct: 25  TKNIERLTNNLGIVTNPKISPDKRYVYFRLMTGKSGESSDIYSIDLERGNLTRVTYLCGK 84

Query: 304 NISASYSPDSSQIVFES----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           + S        + ++ S    D+ G   +            + +    +       P  +
Sbjct: 85  STS--------RRMYTSIAGFDKNGNLIISTDAYYPFGTPMLYRIVNGNIEPLNLGPALN 136

Query: 360 LIAF-----TKFSGEKFAIGVMKKDGSQERLLV-----------EDSNLQAPTWSPSGRS 403
           +I +        +          K G++ ++L             +SN+ +P        
Sbjct: 137 IIYYADYTIIGRNTIDMPHWKRYKGGTRGKILSCKNDDFKIIIDLESNVNSPMIYNDE-- 194

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNET 429
           L F    +G   + +YS D  G N  
Sbjct: 195 LYFISDHEGS--ANIYSTDFTGGNLK 218



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 82/265 (30%), Gaps = 44/265 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +   D  G N++  T  +D  +     S + +K+ +     +    ++     I    + 
Sbjct: 207 IYSTDFTGGNLKKHTDFKDYYVRNA--SSDNKKIIF-----QKSGSLFTFQNDIVEKLEI 259

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT----LFINISA- 307
             N  S+ +  R           V+  + +  Y ++   N    ++        I     
Sbjct: 260 NINIPSVNIESRI----------VKATDYLTDYKINYTGNLIGLISRGQALFTGIKTGPV 309

Query: 308 -----------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                       +  ++  I++  + E   Q+ +   + +  K+    K    F    SP
Sbjct: 310 MNINKLKNQIIEFMNNNDIIIYNYNEE-NNQILLYSVDKT-LKKFFDFKNGIIFSLKASP 367

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSR----KK 410
            G  IA       +F + ++  +      +   E   +   +WS     L +S       
Sbjct: 368 DGKYIAI---GNNRFELFILNLENGNINKIDESESGTIDDFSWSNDSILLAYSYPESEYY 424

Query: 411 DGDTGSKLYSIDLNGRNETLINTPA 435
             +  S +   DL    +    TP 
Sbjct: 425 GYNGSSSIKIFDLKTNKKYDATTPG 449



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 42/115 (36%), Gaps = 10/115 (8%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-- 367
           SPD   I   ++R    +L+++     +  +I + +  +  D  WS    L+A++     
Sbjct: 366 SPDGKYIAIGNNR---FELFILNLENGNINKIDESESGTIDDFSWSNDSILLAYSYPESE 422

Query: 368 ----GEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSK 417
                   +I +     +++        +   P +S     L +  K+  D  + 
Sbjct: 423 YYGYNGSSSIKIFDLKTNKKYDATTPGAIDFKPVFSNDDNYLFYLSKRSLDPVAD 477



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 52/139 (37%), Gaps = 11/139 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           N + +   D   ++     ++ I+F  + SP+ + +A       +   +++++       
Sbjct: 338 NQILLYSVD-KTLKKFFDFKNGIIFSLKASPDGKYIAI----GNNRFELFILNLENGNIN 392

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFIN 304
           K   +    I    +S++      S  +      + +  I   DL++N     T    I+
Sbjct: 393 KIDESESGTIDDFSWSNDSILLAYSYPESEYYGYNGSSSIKIFDLKTNKKYDATTPGAID 452

Query: 305 ISASYSPDSSQIVFESDRE 323
               +S D + + + S R 
Sbjct: 453 FKPVFSNDDNYLFYLSKRS 471



 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 55/153 (35%), Gaps = 17/153 (11%)

Query: 172 DFNSRILFVSESVVSGII------KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           DF + I+F  ++   G        +  L +++ +  NI  +  S    + +  +S +   
Sbjct: 354 DFKNGIIFSLKASPDGKYIAIGNNRFELFILNLENGNINKIDESESGTIDDFSWSNDSIL 413

Query: 226 VAYA-----TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-- 278
           +AY+      Y       + + D + ++         ++   P FS++        ++  
Sbjct: 414 LAYSYPESEYYGYNGSSSIKIFDLKTNKKYDA-TTPGAIDFKPVFSNDDNYLFYLSKRSL 472

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           D   D    +L      ++T    I +  +  P
Sbjct: 473 DPVADQLVFNL---GYPKITKPFAIPVKENIFP 502


>gi|73951322|ref|XP_536215.2| PREDICTED: similar to WD repeat domain 61 isoform 1 [Canis
           familiaris]
          Length = 305

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 55/165 (33%), Gaps = 9/165 (5%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D D         +     +   FSP+ Q +A  T+  +    V +      +    
Sbjct: 88  IRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGK----VNIFGVESGKKEYS 143

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      IL+  +S +GK    S   D  ++I+ +         L        S ++SPD
Sbjct: 144 LDTRGKFILSIAYSPDGKYLA-SGAIDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPD 201

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           S  +V  SD      + +     ++         +   +  + P 
Sbjct: 202 SQLLVTASD---DGYIKIYDVQHANLAGTLSGHASWVLNVAFCPD 243



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 90/284 (31%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+ + KQI  K   + P     +A 
Sbjct: 57  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQI--KSIDAGPVDAWTLA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 114 -FSPDSQYLAT---GTHVGKVNI--FGVESGKKEYSL--------------DTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L+      ++ ++ PD +           + + V   
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTHF---VSSSSDKSVKVWDV 261

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I V  
Sbjct: 262 GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHVYD 302


>gi|312887507|ref|ZP_07747103.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
 gi|311299995|gb|EFQ77068.1| OmpA/MotB domain protein [Mucilaginibacter paludis DSM 18603]
          Length = 630

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 86/291 (29%), Gaps = 60/291 (20%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           ++ +   TG KG + +  +++S+ + +         + +DG  + +    R + L     
Sbjct: 195 NEDFYKSTGSKGKWAN-AVYLSKQINTPNYNEGAQSITQDGQYLFFTGCDRPEGL----- 248

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
               +   Y +    +       D  I        N  +    P  SS+G+       + 
Sbjct: 249 ---GKCDIYVSKKQGN-------DWDIPYDLAFPLNTGNWESQPSISSDGRTLYFVSNRK 298

Query: 280 EAMDIYSV------DLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                Y +      D        L    NT F   S    PD + + F S+  G   L  
Sbjct: 299 GGYGGYDIWKSTLTDKGWAEPVNLGPNINTPFDEQSPFIHPDDNTLYFSSN--GWPGLGN 356

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           M                       S +G+  A+ K     + I     D      L  ++
Sbjct: 357 MDV-------------------FISRRGNDGAWQKPDNLGYPINTNADDSG----LTLNA 393

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYS--IDLNGRNETLINTPAYASD 439
           N     +S             G  G  +YS  +    R + +     + +D
Sbjct: 394 NGNLAYFSSD--------NLQGYGGFDIYSFEMPAPLRPQLVTYVKGFVTD 436



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 56/171 (32%), Gaps = 23/171 (13%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-------QKRISQDKEASYFD 351
           NT         + D S ++F       E  Y    +           K+I      +   
Sbjct: 169 NTKNDEYMPVITADESTLIFTRKINNNEDFYKSTGSKGKWANAVYLSKQI-NTPNYNEGA 227

Query: 352 PVWSPQGDLIAFT---KFSG-EKFAIGVMKKDGSQERLLVE------DSNLQA-PTWSPS 400
              +  G  + FT   +  G  K  I V KK G+   +  +        N ++ P+ S  
Sbjct: 228 QSITQDGQYLFFTGCDRPEGLGKCDIYVSKKQGNDWDIPYDLAFPLNTGNWESQPSISSD 287

Query: 401 GRSLIFSRKK-DGDTGSKLYSIDL-NGRNETLINTPAYASDP--QWVGFMD 447
           GR+L F   +  G  G  ++   L +      +N     + P  +   F+ 
Sbjct: 288 GRTLYFVSNRKGGYGGYDIWKSTLTDKGWAEPVNLGPNINTPFDEQSPFIH 338



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 52/181 (28%), Gaps = 26/181 (14%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-------ERLTNTLFINISA 307
           N ++    P  +++    + + + +   D Y                +++    +   + 
Sbjct: 169 NTKNDEYMPVITADESTLIFTRKINNNEDFYKSTGSKGKWANAVYLSKQINTPNYNEGAQ 228

Query: 308 SYSPDSSQIVFES-DRE---GKEQLYVMQSNGSDQ-----KRISQDKEASYFDPVWSPQG 358
           S + D   + F   DR    GK  +YV +  G+D           +       P  S  G
Sbjct: 229 SITQDGQYLFFTGCDRPEGLGKCDIYVSKKQGNDWDIPYDLAFPLNTGNWESQPSISSDG 288

Query: 359 DLIAFTKFSGEKF---AIGVMKKDGSQ-------ERLLVEDSNLQAPTWSPSGRSLIFSR 408
             + F       +    I                   +    + Q+P   P   +L FS 
Sbjct: 289 RTLYFVSNRKGGYGGYDIWKSTLTDKGWAEPVNLGPNINTPFDEQSPFIHPDDNTLYFSS 348

Query: 409 K 409
            
Sbjct: 349 N 349


>gi|297285650|ref|XP_001086686.2| PREDICTED: WD repeat-containing protein 51A-like isoform 1 [Macaca
           mulatta]
          Length = 407

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 84/233 (36%), Gaps = 18/233 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 31  TKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAITCVNFSPSGHLLASGSRD--KTVRIW 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+   ++   D+ + +++   Q      L+  
Sbjct: 89  VPNVKGESTAFR--AHTATVRSVHFCSDGQS-FVTASDDKTVKVWATHRQ-KFLFSLSQH 144

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +   +  +      +         + P G  
Sbjct: 145 INWVRCAKFSPDGRLIVSASD---DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTC 201

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
           IA            V        RLL    +  + +   ++ PSG  LI +  
Sbjct: 202 IAAAGMDNTVKVWDV-----RTHRLLQHYHLHSAAVNGLSFHPSGNYLITASS 249



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 33/261 (12%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           ++R   H   D I        G            + SG    ++ +   +         +
Sbjct: 54  AYRFTGHK--DAITCVNFSPSG----------HLLASGSRDKTVRIWVPNVKGESTAFRA 101

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    F  + Q    A+ D      V +  T   +    +    + +   +FS +G
Sbjct: 102 HTATVRSVHFCSDGQSFVTASDDK----TVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 157

Query: 270 KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R ++S   D+ + ++  D  S                  + P  + I           +
Sbjct: 158 -RLIVSASDDKTVKLW--DKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM---DNTV 211

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V         +      A+     + P G+ +           + +M     + RLL  
Sbjct: 212 KVWDVRTHRLLQHYHLHSAAVNGLSFHPSGNYLITASSDSTLKILDLM-----EGRLLYT 266

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
               Q P       ++ FSR 
Sbjct: 267 LHGHQGPA-----TTVAFSRT 282


>gi|164656851|ref|XP_001729552.1| hypothetical protein MGL_3096 [Malassezia globosa CBS 7966]
 gi|159103445|gb|EDP42338.1| hypothetical protein MGL_3096 [Malassezia globosa CBS 7966]
          Length = 452

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 69/213 (32%), Gaps = 22/213 (10%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS---VDLQSNATER 296
           ++ +T        +      ++A  FS +G+    +   D  + ++     D + +  E 
Sbjct: 91  WIWNTIDGSEIAHLSGHTDSVVAVAFSHDGEMVA-TGGLDGRIRVWRRHGKDDEWSTWEF 149

Query: 297 LTN--TLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           LTN       +  ++ P    +V   SD      +++ +     +  +      S     
Sbjct: 150 LTNLEGPTEVVWLTWHPRGPVLVAGASD----TTIWMWKLPSGAEMNVFNGHTGSVTCGR 205

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--------RLLVEDSNLQAPTWSPSGRSLI 405
           ++P G  +      G    + V     +               D  + +   SP  + ++
Sbjct: 206 FTPDGRRLVTGSDDGS---LIVWDPSTAAPLGKLKDTDTRFALDGGIMSLCVSPDNKLVV 262

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                 G     + ++D  G  + + +  A+ S
Sbjct: 263 VGGAAGGIRVVSIANLDQGGAAQLVGSFDAHDS 295



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 70/219 (31%), Gaps = 17/219 (7%)

Query: 185 VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VSG   ++  + +  DG+ I +L+   D ++    FS + + VA    D    +      
Sbjct: 82  VSGGEDDAAWIWNTIDGSEIAHLSGHTDSVVAV-AFSHDGEMVATGGLDGRIRVWRRHGK 140

Query: 244 TRIDRAPKRIGNFRSMILAP--RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-T 300
                  + + N           +   G   L++   D  + ++ +   S A   + N  
Sbjct: 141 DDEWSTWEFLTNLEGPTEVVWLTWHPRGP-VLVAGASDTTIWMWKLP--SGAEMNVFNGH 197

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK------EASYFDPVW 354
                   ++PD  ++V  SD      L V   + +      +D       +        
Sbjct: 198 TGSVTCGRFTPDGRRLVTGSD---DGSLIVWDPSTAAPLGKLKDTDTRFALDGGIMSLCV 254

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           SP   L+     +G    + +   D      LV   +  
Sbjct: 255 SPDNKLVVVGGAAGGIRVVSIANLDQGGAAQLVGSFDAH 293



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 56/184 (30%), Gaps = 22/184 (11%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR------FSPNQQKVAYATYDDEDIL 237
           V +G +   + V  R G +  + T      L  P       + P    +     D     
Sbjct: 123 VATGGLDGRIRVWRRHGKDDEWSTWEFLTNLEGPTEVVWLTWHPRGPVLVAGASDT---- 178

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--- 294
            +++                  +   RF+ +G+R + +   D ++ ++  D  + A    
Sbjct: 179 TIWMWKLPSGAEMNVFNGHTGSVTCGRFTPDGRRLV-TGSDDGSLIVW--DPSTAAPLGK 235

Query: 295 -----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                 R      I +S   SPD+  +V      G   + +   +     ++    +A  
Sbjct: 236 LKDTDTRFALDGGI-MSLCVSPDNKLVVVGGAAGGIRVVSIANLDQGGAAQLVGSFDAHD 294

Query: 350 FDPV 353
               
Sbjct: 295 SGES 298


>gi|85708904|ref|ZP_01039970.1| dipeptidyl aminopeptidase [Erythrobacter sp. NAP1]
 gi|85690438|gb|EAQ30441.1| dipeptidyl aminopeptidase [Erythrobacter sp. NAP1]
          Length = 741

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 52/305 (17%), Positives = 97/305 (31%), Gaps = 86/305 (28%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLM--------------------------DTRIDRAPK 251
           +FSP+ + +      +ED  R  L                           D ++ R   
Sbjct: 51  KFSPDGKYLTLLRNREEDSSRYDLWGYDFATREWRMLVDSEAIGSGRELSEDEKMQRERA 110

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+G+ + +I   +++S+G   L+ +  D  +    +D      +RLT+T    ++   S 
Sbjct: 111 RVGSLKGIISY-QWASDGSGVLVPI--DGDLYFAKLD---GTVQRLTDTEESELNPKLSS 164

Query: 312 DSSQIVFESDREGKEQLYVMQSNG---------------SDQKRISQDKEASYFDPVWSP 356
            +  + F  DR    QL+V +  G                + + ++Q++ +      W P
Sbjct: 165 KAGYVSFVRDR----QLWVGEVGGEAAPITPKEEDTIRWGEAEFVAQEEMSRLTGYWWGP 220

Query: 357 QGDLIAFTKFSGEKFAI------------------------------GVMKKDGSQERL- 385
               IA  +       I                               VM  DG      
Sbjct: 221 NDQRIAVQRTDESPVGIVTRAAIGATGTQVFDQRYPVAGSDNAIVELYVMDPDGGNRVKV 280

Query: 386 -LVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            L +D+++      W P    L   R+    T   +  +D +     +  T   A D  W
Sbjct: 281 DLGDDTDIYVARVNWGPD-DYLYVQRQNREQTVLDMLKVDPSTGESEVWFTETAARDDYW 339

Query: 443 VGFMD 447
           +   D
Sbjct: 340 INLSD 344



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/320 (15%), Positives = 96/320 (30%), Gaps = 47/320 (14%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN- 191
           V   +      ++  P   R       +     +T          +F     V+G     
Sbjct: 205 VAQEEMSRLTGYWWGPNDQRIAVQRTDESPVGIVTRAAIGATGTQVFDQRYPVAGSDNAI 264

Query: 192 -SLCVMDRDGANIRYLTPSRDQILFEPR--FSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             L VMD DG N   +    D  ++  R  + P+     Y    + +   + ++      
Sbjct: 265 VELYVMDPDGGNRVKVDLGDDTDIYVARVNWGPD--DYLYVQRQNREQTVLDMLKVDPST 322

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
               +                        +  A D Y ++L  N                
Sbjct: 323 GESEV---------------------WFTETAARDDYWINLSDNY--------------R 347

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +  D S +++ S+R+G    Y    +G +  +++  KE           GD + +   + 
Sbjct: 348 FLKDGS-LLWWSERDGFGNFYRF--DGENWTQLTSRKEPVTALVGVDQDGDKLYYRAVTD 404

Query: 369 -EKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                + V      S+  LL +     + +  P+G+ L+ SR          Y  D  G 
Sbjct: 405 VLTEQVYVSSLSAESEPTLLTDPDYTNSASMDPTGKGLLISRSATDQPTQS-YIADTRGE 463

Query: 427 NETLINTPAYASDPQWVGFM 446
               +   A  +D  +  F+
Sbjct: 464 RLVWVEENALDADHPYTPFL 483


>gi|330841642|ref|XP_003292803.1| hypothetical protein DICPUDRAFT_157560 [Dictyostelium purpureum]
 gi|325076930|gb|EGC30678.1| hypothetical protein DICPUDRAFT_157560 [Dictyostelium purpureum]
          Length = 924

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 17/215 (7%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                ++   FSP+ Q +   + D     R++ M+T  +    +  NF   +    FS  
Sbjct: 651 GHSGPVYGCSFSPDSQYLLSCSEDT--TARLWSMETMSNLVCYKGHNFP--VWDVSFSPF 706

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G     +   D    +++ +  S      T  L    +  + P+ + +   S+    +  
Sbjct: 707 GYYFA-TASHDRTARLWTTNYIS-PLRIFTGHLSDCNTVKFHPNINYLATGSN---DKSA 761

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            + +       RI     A  +   +SP G L+A    +GE  ++ +      ++   ++
Sbjct: 762 RLWEIQTGKCVRIFMGHRAPIYSLAFSPDGRLLA---TAGEDTSVILWDLSTGKKVKKMD 818

Query: 389 DSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
                  +  +S  G  L        D   +L+ +
Sbjct: 819 GHTKCVYSLDFSQDGSILA---SGSSDCTVRLWDV 850


>gi|225465993|ref|XP_002264669.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297745032|emb|CBI38624.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 64/196 (32%), Gaps = 9/196 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++ + +   Y          +            +I    + I   R+S + +  L +   
Sbjct: 55  WALDSE---YILCGLYKRPMIQAWSLTQPEWTCKIDEGPAGIAYARWSPDSRHILTTSDF 111

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++S+   +    +        +S  ++ D       + R+ K+ + ++  +  + 
Sbjct: 112 QLRLTVWSLVNTACVHVQWPKHASKGVS--FTQDGKFAAICTRRDCKDYINLLSCHTWEI 169

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAP 395
             +         D  WSP    I     S  ++ + +   DG   S+ +       ++  
Sbjct: 170 MGVFAVDTLDLADIEWSPDDSAIV-IWDSPLEYKVLIYSPDGRCLSKYQAYESGLGVKTV 228

Query: 396 TWSPSGRSLIFSRKKD 411
           +WSP G+ L       
Sbjct: 229 SWSPCGQFLAVGSYDQ 244



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 54/155 (34%), Gaps = 13/155 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+SP+ + +   +      LR+ +           +   +       F+ +GK A I  +
Sbjct: 97  RWSPDSRHILTTSDFQ---LRLTVWSLVNTACVH-VQWPKHASKGVSFTQDGKFAAICTR 152

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDREGKEQLYVMQS 333
           +D    I  +   +     +     ++        +SPD S IV   D   + ++ +   
Sbjct: 153 RDCKDYINLLSCHT---WEIMGVFAVDTLDLADIEWSPDDSAIV-IWDSPLEYKVLIYSP 208

Query: 334 NGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +G    K  + +         WSP G  +A   + 
Sbjct: 209 DGRCLSKYQAYESGLGVKTVSWSPCGQFLAVGSYD 243


>gi|156062988|ref|XP_001597416.1| hypothetical protein SS1G_01610 [Sclerotinia sclerotiorum 1980]
 gi|154696946|gb|EDN96684.1| hypothetical protein SS1G_01610 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 846

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 100/279 (35%), Gaps = 24/279 (8%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G  ++   FV+ S    + K S   M  D   +R   P RD        SPN +  A A+
Sbjct: 63  GVDSTNDFFVAGSEDGTVSKYSFDTMSFDKFLMRCSLPVRDV-----AISPNGRWCAVAS 117

Query: 231 YD-----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS-SNGKRALISVQKDEAMDI 284
            +      +     ++M  R  + P +  +F         S ++G   + S+  +E   +
Sbjct: 118 DELTVKIVDTNDVNHMMYLRDQQKPAKHLSFDPSNKFITLSCTDGMIYVYSLLDEEPELV 177

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQ 343
            ++D        +     I+    + PD        + R+    + VM  +  +++R+  
Sbjct: 178 RTID---GMIRAVETDDEISSKVVWHPDGRAFAAPTATRD----IQVMSRSDWEKQRVFA 230

Query: 344 DKE-ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           +          WSP G ++A    +G+   I + +    +     + +N+    W P+  
Sbjct: 231 NGHTGDITALAWSPNGAMLA---SAGKDRKILLWETKTQKIIATYDHANVMDLAWHPTDN 287

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDP 440
            L F+         + +    +     L   PA +  DP
Sbjct: 288 LLSFTNSDGEVYIFQNFVPSEHAHLVRLGRQPAPFVHDP 326


>gi|21226492|ref|NP_632414.1| putative surface layer protein [Methanosarcina mazei Go1]
 gi|20904758|gb|AAM30086.1| putative surface layer protein [Methanosarcina mazei Go1]
          Length = 425

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/203 (13%), Positives = 67/203 (33%), Gaps = 20/203 (9%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            AY T    D   V+++DT  +     +            +  G +  ++     +  + 
Sbjct: 34  FAYVTSLGVDTGTVFVIDTTTNNLTAVV-PVEGWPFGVAINPAGTKVYVADLSGTSTTVS 92

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            +D  +N  E + +        +  P  S+ V+ ++R       V+ ++ ++   I    
Sbjct: 93  VIDTATNTVEAVVDVGGYPRGVAVDPTGSR-VYVTNR-----YSVVDNDSNNVSVIDTST 146

Query: 346 EA---------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP- 395
            +         S ++  ++P G  I  T       +  V+    ++    V   +     
Sbjct: 147 NSVVGTVNVGLSTYNVAFTPDGKKIYATNSRNNTTS--VIDATTNKVTDTVPVGDHPTDI 204

Query: 396 TWSPSGRSLIFSRKKDGDTGSKL 418
             SP G  + +      +  S +
Sbjct: 205 AISPDGNKV-YVTNSGSNNVSVI 226


>gi|327404032|ref|YP_004344870.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327319540|gb|AEA44032.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 734

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 40/116 (34%), Gaps = 13/116 (11%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              +++      DI       T I   P +  N +       FS +GK+A I+       
Sbjct: 182 GNHLSFLDLYVADINPSNNDVTNIQPIPSKKVNKKYHEGPVAFSPDGKQAYITRNNYGDK 241

Query: 283 DI--------YSVDLQSNA----TERLTNTLFINIS-ASYSPDSSQIVFESDREGK 325
            I        Y  +L           + N+   ++  A++SPD   + F SD  G 
Sbjct: 242 SIDGTRHFALYVSNLVGGTWSEPEPVVFNSNDYSVGHATFSPDGKTLFFASDMPGG 297



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 18/111 (16%)

Query: 328 LYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLIAFTKFSGEK--------FAIGVM 376
           +    ++ ++ + I     +K+       +SP G     T+ +           FA+ V 
Sbjct: 195 INPSNNDVTNIQPIPSKKVNKKYHEGPVAFSPDGKQAYITRNNYGDKSIDGTRHFALYVS 254

Query: 377 KKDGSQ------ERLLVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYS 420
              G              D ++   T+SP G++L F+     G  G  +Y 
Sbjct: 255 NLVGGTWSEPEPVVFNSNDYSVGHATFSPDGKTLFFASDMPGGKGGVDIYR 305


>gi|288921302|ref|ZP_06415584.1| hypothetical protein FrEUN1fDRAFT_5282 [Frankia sp. EUN1f]
 gi|288347276|gb|EFC81571.1| hypothetical protein FrEUN1fDRAFT_5282 [Frankia sp. EUN1f]
          Length = 386

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 77/238 (32%), Gaps = 29/238 (12%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHT--ISDDIYQSITGEKG-DFNSRILFVSESVVS 186
           L+D  D   +   +    P+  R  A     +  ++++     G  F++           
Sbjct: 163 LFD-ADFHVLHSFRLTGVPSRARLSADARLAAVTVFETGHSYAGPAFSTTTTLYDVVNRK 221

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            +       + RD   I  +    DQ  +   F+ +     YAT   E    +     R 
Sbjct: 222 ELGNLEQFAIYRDDRRINPV----DQNFWGVTFAADDDT-FYATLSTEGTTYLVRGSLRA 276

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLF 302
                   N       P  S +G R       +           +DL++     L++T  
Sbjct: 277 HEVHTLTTNVE----CPSLSPDGTRVAFKERVAGDGPVRWVATVLDLRTMRRTHLSDTRS 332

Query: 303 INISASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           ++   ++  D+  I +   R+G +      +V  ++GS + RI            WSP
Sbjct: 333 VDDQIAWY-DNETIAYGLPRDGGDAAITDTWVEPADGSGKARI-------LVAKAWSP 382



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/96 (15%), Positives = 35/96 (36%), Gaps = 3/96 (3%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           D +RI+   +  +     +      A     G  +   +++       +    +N++ P+
Sbjct: 234 DDRRINPVDQNFWGVTFAADDDTFYATLSTEGTTY---LVRGSLRAHEVHTLTTNVECPS 290

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            SP G  + F  +  GD   +  +  L+ R     +
Sbjct: 291 LSPDGTRVAFKERVAGDGPVRWVATVLDLRTMRRTH 326


>gi|284043339|ref|YP_003393679.1| hypothetical protein Cwoe_1878 [Conexibacter woesei DSM 14684]
 gi|283947560|gb|ADB50304.1| hypothetical protein Cwoe_1878 [Conexibacter woesei DSM 14684]
          Length = 635

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 76/263 (28%), Gaps = 68/263 (25%)

Query: 215 FEPRFSPNQQKVAYATY------DDEDILRVYLMDTRIDRAPKRIGN------------- 255
           + P  S + + VA+ +        D ++     +  R+    +RI               
Sbjct: 50  WGPSVSADGRWVAFVSTAANAVPGDTNVRSDAFLRDRVTGETRRISARADGTQGNEDSDS 109

Query: 256 --FRSMILAPRF-----SSNGKRALISVQK---------DEAMDIYSVDLQSNATERLTN 299
             F S+  AP F     S +G+    +            +   D++  D  +N   RL+ 
Sbjct: 110 VPFGSVAFAPVFAETSISDDGRYVAFTSFATNLATAGATNVWSDVFLYDRVANTLRRLST 169

Query: 300 TLFINIS------ASYSPDSSQIVFESDREG-------KEQLYVMQSNGSDQKRISQDKE 346
           ++  +        A  +PD + +VF S              +++         R+ +   
Sbjct: 170 SVGGDDGRGDSFDAHVAPDGTHVVFASVAADLVTTNNVPRDVFLADVATGALTRVGEAPG 229

Query: 347 ASYF-----DPVWSPQGDLIAFTKFS--------GEKFAIGVMKKDGSQERL-------L 386
                        S  G  +AF+  +          +  + V +                
Sbjct: 230 GRRATAGSDTGDVSAGGRFVAFSSHASNLVGGDGNGREDVFVRETATGGIERVSVSASSS 289

Query: 387 VEDSNLQAPTWSPSGRSLIFSRK 409
             +   + P+ S  G  + F   
Sbjct: 290 DANGGSERPSISADGCLVAFVSD 312


>gi|195481659|ref|XP_002101727.1| GE17787 [Drosophila yakuba]
 gi|194189251|gb|EDX02835.1| GE17787 [Drosophila yakuba]
          Length = 468

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 5/106 (4%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  ++ D +Q+   S   G   + + Q +    + + +          WSP  D + F 
Sbjct: 237 TSMQWNRDGTQLATASI--GDRSIIIWQPDNGMMQPLKRLGPPGSLLK-WSPDNDWL-FA 292

Query: 365 KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
                 F +    +  + ER +      +Q   WSP GR L+F   
Sbjct: 293 ATVDRVFRVWNCHQQWTTERWVCGPGGYIQTACWSPCGRFLLFVSS 338


>gi|189011602|ref|NP_001121006.1| notchless protein homolog 1 [Rattus norvegicus]
 gi|183986083|gb|AAI66567.1| Nle1 protein [Rattus norvegicus]
          Length = 487

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 105 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 160

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSN-GSDQKRISQDKEASYFDPVW-----S 355
            +S S+SPD  ++       G    Q+ +   + G+   R             W     +
Sbjct: 161 VLSISWSPDGKKLA-----SGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMN 215

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + V     G  ER+L     ++    W   G  L++S  +D
Sbjct: 216 PECRYVASSSKDGS---VRVWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 268



 Score = 43.1 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 18/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 133 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA---SGCKNGQILLWDPST 189

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ ++           LT  
Sbjct: 190 GTQVGRTLTGHSKWITGLSWEPLHMNPECRYVA-SSSKDGSVRVWDT-TAGRCERILTGH 247

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 248 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 300



 Score = 43.1 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 342 GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASF---DKSI 398

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 399 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLTTDLPGH 457

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 458 ADEVYAVDWSPDGQRVA 474



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 47/156 (30%), Gaps = 18/156 (11%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            A  R T++L  +  A    ++SP    +   S   G   +     +        +    
Sbjct: 103 RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGS---GDTTVRFWDLSTETPHFTCKGHRH 159

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-----DSNLQAP-TWSPSG 401
                 WSP G  +A +     +  +          R L             P   +P  
Sbjct: 160 WVLSISWSPDGKKLA-SGCKNGQILLWDPSTGTQVGRTLTGHSKWITGLSWEPLHMNPEC 218

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           R +  S  KDG    +++     GR E ++     +
Sbjct: 219 RYVA-SSSKDGSV--RVWDTTA-GRCERILTGHTQS 250



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 37/100 (37%), Gaps = 6/100 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++LF  +S +         +   DG   +YL         +++  +S + + +   + D 
Sbjct: 379 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 438

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                + + D +  +    +      + A  +S +G+R  
Sbjct: 439 ----TLKVWDVKAQKLTTDLPGHADEVYAVDWSPDGQRVA 474


>gi|147677110|ref|YP_001211325.1| hypothetical protein PTH_0775 [Pelotomaculum thermopropionicum SI]
 gi|146273207|dbj|BAF58956.1| hypothetical membrane protein [Pelotomaculum thermopropionicum SI]
          Length = 616

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 78/244 (31%), Gaps = 27/244 (11%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R    S    + + R+SP+ +   Y        L V             + N  S +   
Sbjct: 104 RTKVASGISFITQARWSPDGR---YLGMAGGRQLHVLDSANDSLNPVNELVNLPSAVFF- 159

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +S +G+   +  + +  ++    +++S                SY    +   F++   
Sbjct: 160 GWSPDGRTVYV--EHENVVNGAVFNVESR-----------EGLPSYKIKDNPPFFKAQLS 206

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPV-----WSPQGDLIAFTKFSGEKFAIGVMKK 378
           G   +  + +  S  + +  D E      V         G+ I   +     F +     
Sbjct: 207 GNLFIGTVANEPSASETVLLDGEGQVQKSVGEGKFRDADGNSIL--QVGKGDFGLAYYAD 264

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSR--KKDGDTGSKLYSIDLNGRNETLINTPAY 436
             + E +L+ D  +    + P G  +I++   +   +    L  +   G+    ++ P +
Sbjct: 265 VNTPEGVLLTDKFIYQCRFLPRGG-IIYTTPGETGAELNYDLTVVTQEGQKTVKVSGPHF 323

Query: 437 ASDP 440
              P
Sbjct: 324 NVWP 327


>gi|299755430|ref|XP_001828655.2| TFIID and SAGA subunit [Coprinopsis cinerea okayama7#130]
 gi|298411223|gb|EAU93159.2| TFIID and SAGA subunit [Coprinopsis cinerea okayama7#130]
          Length = 786

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 76/225 (33%), Gaps = 20/225 (8%)

Query: 219 FSPNQQKVA-----YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGK-- 270
           +S   +K+      +++   +D   +  +  +     +++      + +  F   NG   
Sbjct: 471 WSLKGEKLRGLRSDFSSSSVKDAASLQKIREKKGSTTRKLIGHSGPVYSVDFDPVNGSAA 530

Query: 271 --RALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQ 327
             + L+S   D  + ++S+D  +N      +     ++   +SP          R+   +
Sbjct: 531 PPKYLLSSSADATVRLWSMDTLTNVVAFRGHENPVWDV--KWSPMGIYFA-TGSRDRTAR 587

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           L+   ++ +   RI            + P    +A T  S     +  +++  S    + 
Sbjct: 588 LW--STDRTACLRIYAGHLGDVDCVGFHPNSLYLA-TGSSDWTARLWDVQRGASVRVFVG 644

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
               +   T SP GR L        D    L+ +    R + +  
Sbjct: 645 HQGPVSCLTLSPDGRYLA---TAGEDLAINLWDLGSGKRVKKMTG 686



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 22/180 (12%), Positives = 65/180 (36%), Gaps = 7/180 (3%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E   ++ +   +     +G    +  +   D      +       +    F PN   +A
Sbjct: 561 HENPVWDVKWSPMGIYFATGSRDRTARLWSTDRTACLRIYAGHLGDVDCVGFHPNSLYLA 620

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D        L D +   + +     +  +     S +G+    +  +D A++++ +
Sbjct: 621 TGSSD----WTARLWDVQRGASVRVFVGHQGPVSCLTLSPDGRYLA-TAGEDLAINLWDL 675

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                  +++T       S ++S +SS +V     +   + + ++S G  + + +++ + 
Sbjct: 676 -GSGKRVKKMTGHTSSIYSLAFSAESSLLV-SGGADWTVRCWDVKSAGGLRAKPTENGDT 733


>gi|238485099|ref|XP_002373788.1| meiotic recombination protein Ski8/Rec14, putative [Aspergillus
           flavus NRRL3357]
 gi|220701838|gb|EED58176.1| meiotic recombination protein Ski8/Rec14, putative [Aspergillus
           flavus NRRL3357]
          Length = 420

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 60/174 (34%), Gaps = 12/174 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VS      +  +D +G  IRY   ++         S + + +A       +   VY+  
Sbjct: 232 GVSQDGHIRVWDLDANGEQIRY-YETKGSFGTCIDLSADGRFIA----SGHENGSVYIFS 286

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLF 302
           T   R P  +      + A  FS  GK         ++  I   D  S      L     
Sbjct: 287 TETGRMPFSLSGLVKPVRAVAFSPGGKFLA---AAGDSNVIVLYDTSSGEQVANLPGHSA 343

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             +S S+S     ++  S  +GK +++ + +          + E + ++  W P
Sbjct: 344 WVLSLSWSHTGEYLLSGSF-DGKVKVWSIDTRTCVAT--HSETERAVWNVKWLP 394



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 60/179 (33%), Gaps = 26/179 (14%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G    +    D            NA    T    I    + S D   +   S  +G  ++
Sbjct: 189 GGEIRVWSCHDGNWSENKTVSAGNAGS--TGVWAI----ALSCDGQYLAGVSQ-DGHIRV 241

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           + + +NG +Q R  + K +       S  G  IA    +G    + +   +    R+   
Sbjct: 242 WDLDANG-EQIRYYETKGSFGTCIDLSADGRFIASGHENGS---VYIFSTETG--RMPFS 295

Query: 389 DSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            S L  P     +SP G+ L  +   +      +   D +   E + N P ++    WV
Sbjct: 296 LSGLVKPVRAVAFSPGGKFLAAAGDSN-----VIVLYDTS-SGEQVANLPGHS---AWV 345


>gi|195584363|ref|XP_002081977.1| GD11312 [Drosophila simulans]
 gi|194193986|gb|EDX07562.1| GD11312 [Drosophila simulans]
          Length = 353

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/210 (13%), Positives = 74/210 (35%), Gaps = 18/210 (8%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G +I++        +   +FS   + +  ++ D      + L D    R  + +    + 
Sbjct: 44  GYSIKHSLLGHSGSVTGLKFSSCGENLVSSSADM----LLMLWDLSATRCIQSLAGHENG 99

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVF 318
           +    +S++G   + S   D+ + ++  D +S    + L        S  ++P S+ +  
Sbjct: 100 VNDVAWSADG--LIASCSDDKTVRLW--DSRSKLCVKVLKGHCGYTFSCCFNPQSNLLAS 155

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E + +          I +  +       +  +G++   + F G    + +   
Sbjct: 156 TSF---DETVRLWDVRTGKTLEIVRAHQDPITSVDFHREGNIFVTSSFDG---LVRLWDT 209

Query: 379 DGSQERLLVEDSNL---QAPTWSPSGRSLI 405
                   + D +        +SP+GR ++
Sbjct: 210 STGHVMKTLVDVDNIPVGHVKFSPNGRYIL 239


>gi|47209290|emb|CAF89573.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 832

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 86/261 (32%), Gaps = 23/261 (8%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRK--QIIGKKFFSSPASWRKIAHTISDDIYQSI-TGEK 170
           GR++  G    RV   LW V       +       + +   ++A T +  ++QS+   + 
Sbjct: 33  GRLLATGGHDCRVN--LWAVSKANCIMVSAPGHVVTASCCEQLAVTEACWVHQSLPGHKS 90

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
                +     + +V+G    S+ V D + A I  +       +    F P Q  +A  +
Sbjct: 91  PVECVQFNTSEDQIVTGSQSGSIRVWDMEAAKIVRMLTGHKSSISSLAFHPFQGFLASGS 150

Query: 231 YDD---------EDILRV--YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            D          E  L+V   L D R      R       + +  FS +GK    S   D
Sbjct: 151 MDTNIKVGLVVTEGRLQVGQELWDFRRRGHVFRYTGHSQAVRSLAFSPDGKWLA-SASDD 209

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQ 338
             + ++ + +Q       T          ++P+   +    SDR     + +        
Sbjct: 210 GTVKLWDL-MQGKTITEFTAHTAAVNVVQFNPNEYLLASGSSDRS----VKLWDLEKFKM 264

Query: 339 KRISQDKEASYFDPVWSPQGD 359
               +          +SP GD
Sbjct: 265 IGSLEGNATPVRCICFSPDGD 285


>gi|150015000|ref|YP_001307254.1| hypothetical protein Cbei_0108 [Clostridium beijerinckii NCIMB
           8052]
 gi|149901465|gb|ABR32298.1| hypothetical protein Cbei_0108 [Clostridium beijerinckii NCIMB
           8052]
          Length = 340

 Score = 50.4 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 92/256 (35%), Gaps = 30/256 (11%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMD---RDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           +S I   S S  +   K S+ V +    D         +     F P F  N   + +  
Sbjct: 21  SSNIASPSNSQTAPPSKTSIQVQNTQAMDATEPNSFILTSSSSYFCP-FLFNGNNLIFPN 79

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG----KRALISVQKDEAMDIYS 286
            D+ + + +          PK I   +S+     +S++      + +      +   + S
Sbjct: 80  PDENNRISII-----PSPFPKDILESKSVTDFANYSADNMTLINQMIYFSNGSDNNALSS 134

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            ++      +L +    N+ AS     +  +F  ++  + ++Y   ++ S+   +  D  
Sbjct: 135 FNISDKTYTKLNDDSVNNLIAS-----NSELFYINKNNENRIYKYNTSTSEHSLVCPDSV 189

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S+        GD I +   S     +  +K DGS  + L + +      +   G+ L F
Sbjct: 190 GSFII-----NGDFIVYQNLSDNS-KLYSIKTDGSNRQKLTDYTANSFIVF--DGQLLFF 241

Query: 407 SRKKDGDTGSKLYSID 422
           +   +      LYS+D
Sbjct: 242 NSSDNN----NLYSLD 253


>gi|159122883|gb|EDP48003.1| NACHT and WD domain protein [Aspergillus fumigatus A1163]
          Length = 1717

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 78/284 (27%), Gaps = 56/284 (19%)

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
               T E   F+       + + SG+    + + D             D ++    FS + 
Sbjct: 987  HGNTPESVAFSE----AGDRLASGLKNGLIKIWDTGTGGPMQTLQGHDDMVNSVAFSRDG 1042

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
              +A  + D      V + DT      + +      + +  FS+  ++   S   DE + 
Sbjct: 1043 NLLASGSRDH----TVKIWDTATGDCVQILEGHNGPVTSVSFSATSEQVA-SGSADETIK 1097

Query: 284  IYSV----------------------------------------DLQSNATERLTNTLFI 303
            I+ V                                                +L N    
Sbjct: 1098 IWDVVAGKCVQIVEVHYTVHSVAFSNADARLAAGLDGGSTIIWDTATGTQMHKLGNYRAF 1157

Query: 304  NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
              S ++S D  ++      E    + +  +            + + F   +    D +A 
Sbjct: 1158 VESVAFSADDKRLA---SGESHGTIKIWDTATGACLHTLHGHDDTVFYVGFLRDKDRLA- 1213

Query: 364  TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
            +  S     I  M   G   R  V      + + ++S +G  L 
Sbjct: 1214 SGSSDGNVKIWDM-ATGKCMRTFVGHSTGQISSLSFSATGGQLA 1256



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 84/245 (34%), Gaps = 26/245 (10%)

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             F    L   + + SG    ++ + D   G  +R         +    FS    ++A  +
Sbjct: 1200 VFYVGFLRDKDRLASGSSDGNVKIWDMATGKCMRTFVGHSTGQISSLSFSATGGQLA--S 1257

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                D   + + D  I  +   + + +  + +  FS++G R + S+  +  M ++  D  
Sbjct: 1258 AGFADFADIEIWDLAIVDSTTPVQSRQERVKSVTFSASGHRLV-SLSFEGTMRVW--DTV 1314

Query: 291  SNA----TERLTNTLFINISASYSPDSSQIV---FESDREGKEQLYVMQSNGSDQKRISQ 343
            +       ER  +   +  S + S    ++    F  D      + +  +      +  +
Sbjct: 1315 TGQCICTLERPVDGPPV-ASVACSMAGDRVASGLFNGD------IKIWDTVTGRCMQTFK 1367

Query: 344  DKEASYFDP---VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
             +  S        +S  G+ +A      +   I +      +    ++   +    +SP+
Sbjct: 1368 HQGYSLAWVQSVAFSATGEQLASCSMGSD---IKIWNTGTGKCMQTLDHFQVTLVAFSPT 1424

Query: 401  GRSLI 405
            G+ L 
Sbjct: 1425 GQRLA 1429



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 32/291 (10%), Positives = 90/291 (30%), Gaps = 37/291 (12%)

Query: 76   SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGA-QVLVTGRVIKEGKDRLRVEFRLWDVK 134
            +   + +S  +   ++ +      F D+  +    + +          + RV+   +   
Sbjct: 1240 TGQISSLSFSATGGQLASAG----FADFADIEIWDLAIVDSTTPVQSRQERVKSVTFS-A 1294

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
               +++   F  +   W  +         +         +       + V SG+    + 
Sbjct: 1295 SGHRLVSLSFEGTMRVWDTVTGQ-CICTLERPVDGPPVASVACSMAGDRVASGLFNGDIK 1353

Query: 195  VMDRDGANIRYLTPSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + D            +   L       FS   +++A  +        + + +T   +  +
Sbjct: 1354 IWDTVTGRCMQTFKHQGYSLAWVQSVAFSATGEQLASCSMGS----DIKIWNTGTGKCMQ 1409

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------NATERLTNTLFINI 305
             + +F+  +    FS  G+R   +  +   + ++    +         + RL+       
Sbjct: 1410 TLDHFQ--VTLVAFSPTGQRLA-AGLRGGIIKMWRTASRYCMWKIRGHSRRLS------- 1459

Query: 306  SASYSPDSSQIVFESD-------REGKEQLYVMQSNGSDQKRISQDKEASY 349
            S  +S   +Q+   S+                M S G+  +++  D  ++Y
Sbjct: 1460 SLVFSGSGNQLASASEDFTIKVWSTATGDCIQMFSIGTSIRQLFFDPTSTY 1510



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 82/231 (35%), Gaps = 20/231 (8%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            SE V SG    ++ + D        +      +     FS    ++A       D     
Sbjct: 1084 SEQVASGSADETIKIWDVVAGKCVQIVEVHYTVHSV-AFSNADARLA----AGLDGGSTI 1138

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + DT       ++GN+R+ + +  FS++ KR   S +    + I+  D  + A    T  
Sbjct: 1139 IWDTATGTQMHKLGNYRAFVESVAFSADDKRLA-SGESHGTIKIW--DTATGACLH-TLH 1194

Query: 301  LFINISAS--YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               +      +  D  ++   S  +G  +++ M + G   +              +S  G
Sbjct: 1195 GHDDTVFYVGFLRDKDRLASGSS-DGNVKIWDM-ATGKCMRTFVGHSTGQISSLSFSATG 1252

Query: 359  DLIAFTKFSG----EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              +A   F+     E + + ++      +        +++ T+S SG  L+
Sbjct: 1253 GQLASAGFADFADIEIWDLAIVDSTTPVQ---SRQERVKSVTFSASGHRLV 1300


>gi|115448363|ref|NP_001047961.1| Os02g0721600 [Oryza sativa Japonica Group]
 gi|45735977|dbj|BAD13006.1| putative WD-40 repeat protein [Oryza sativa Japonica Group]
 gi|113537492|dbj|BAF09875.1| Os02g0721600 [Oryza sativa Japonica Group]
 gi|215704357|dbj|BAG93791.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215767056|dbj|BAG99284.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 446

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 59/168 (35%), Gaps = 9/168 (5%)

Query: 195 VMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           V D D    + Y     +  +     SP+ +K+A    DD + L   L+D    +    +
Sbjct: 259 VRDYDMERFQLYKHFQFEWPVNHTALSPD-RKLAVIVGDDPNGL---LIDANSGKTLHSL 314

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                   A  +S +G+    +  +D+   I+     S +   L   L    S  ++ D 
Sbjct: 315 KGHFDYSFASAWSPDGRTFA-TGNQDKTCRIWDARNLSKSLHVLRGNLGAIRSIRFTSDG 373

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               F S  E  + ++V        +R   D         +SP  D++
Sbjct: 374 Q---FMSMAEPADFVHVFDVGSDYTRRQELDFFGEISGMSFSPDTDML 418


>gi|67524229|ref|XP_660176.1| hypothetical protein AN2572.2 [Aspergillus nidulans FGSC A4]
 gi|74597328|sp|Q5BA58|DPP5_EMENI RecName: Full=Probable dipeptidyl-peptidase 5; AltName:
           Full=Dipeptidyl-peptidase V; Short=DPP V; Short=DppV;
           Flags: Precursor
 gi|40745521|gb|EAA64677.1| hypothetical protein AN2572.2 [Aspergillus nidulans FGSC A4]
 gi|259488006|tpe|CBF87122.1| TPA: hypothetical dipeptidyl-peptidase (Eurofung) [Aspergillus
           nidulans FGSC A4]
          Length = 722

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 20/117 (17%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFA-------IGVMKKDGSQERLLVED------ 389
                   D   S  G  +A+   + +          I ++  DGS+  + +        
Sbjct: 222 YPPFGGSSDYDISADGKWVAYKSKAPDVPQANHTTAYIYLVPHDGSETPVPINGPGSAPE 281

Query: 390 ---SNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDP 440
               +   P +SP  +SL + + KD    S    +Y  DL  +  T + T  +   P
Sbjct: 282 GIEGDSNNPVFSPDSKSLAYLQMKDPTYESDRRVIYIYDLASKKITPLATE-WDRSP 337



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 64/183 (34%), Gaps = 32/183 (17%)

Query: 266 SSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLF--------INISASYS 310
           S++GK      +  +          IY V    + T    N            + +  +S
Sbjct: 234 SADGKWVAYKSKAPDVPQANHTTAYIYLVPHDGSETPVPINGPGSAPEGIEGDSNNPVFS 293

Query: 311 PDSSQIV--------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           PDS  +         +ESDR     +Y+          ++ + + S     W+ +  ++A
Sbjct: 294 PDSKSLAYLQMKDPTYESDR---RVIYIYDLASKKITPLATEWDRSPDSLKWTDKSTIVA 350

Query: 363 FTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            ++  G    F I V K  G      + +    +  +  SG +L+ +    G T    + 
Sbjct: 351 GSEDEGSGNLFLIPVKKATGDFIPEKLTNGKYASAFYLASGNTLVVT----GSTLYSSWY 406

Query: 421 IDL 423
           +DL
Sbjct: 407 VDL 409



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 56/164 (34%), Gaps = 18/164 (10%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR-------DQILFEPRFSPNQ 223
           G + +      +   +      + ++  DG+                +     P FSP+ 
Sbjct: 237 GKWVAYKSKAPDVPQANHTTAYIYLVPHDGSETPVPINGPGSAPEGIEGDSNNPVFSPDS 296

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +AY    D     D   +Y+ D    +       +     + ++ ++    +   + +
Sbjct: 297 KSLAYLQMKDPTYESDRRVIYIYDLASKKITPLATEWDRSPDSLKW-TDKSTIVAGSEDE 355

Query: 280 EAMDIYSVDL--QSNA--TERLTNTLFINISASYSPDSSQIVFE 319
            + +++ + +   +     E+LTN  +   SA Y    + +V  
Sbjct: 356 GSGNLFLIPVKKATGDFIPEKLTNGKY--ASAFYLASGNTLVVT 397


>gi|332711184|ref|ZP_08431117.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332349998|gb|EGJ29605.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1471

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 117/315 (37%), Gaps = 66/315 (20%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G++   G D+     RLW++++ +Q+                        + ++  +G F
Sbjct: 1145 GKIASLGDDK---TIRLWEIENNQQV------------------------EELSPIEGQF 1177

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD--------QILFEPRFSPNQQK 225
             S  +              L  + +DG         +D          + +  FSP+ Q+
Sbjct: 1178 KSLSISPDG--------KQLAAVKKDGTVHLLELKRKDLKQFKDIKGKISQIIFSPDGQQ 1229

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEA 281
            +A    D+E+ +R+  ++ +    PK+I    S ++   FS +G++           D  
Sbjct: 1230 LA--ALDEENTIRILNLNGKELYKPKKIEKTISQLI---FSRDGQQLAAMHCDYTICDST 1284

Query: 282  MDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            + ++ ++ ++   ++++   +  +       ++ D+  +      E K+   ++    S 
Sbjct: 1285 IHLFELNSKTKTLKKVSKKSYPRVYPESHIVFNSDNKLLAMSIKNELKKHNKILLELESH 1344

Query: 338  QKRISQDKEASYFDPVWSP---QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----DS 390
            ++ +  + +  Y     +    QG+L+A     G+ + I V    G +   L       +
Sbjct: 1345 KQLVGFEDDNGYISSEKNGLDIQGNLLASI---GDSYDIHVWDISGKRLTTLKGKGQPTN 1401

Query: 391  NLQAPTWSPSGRSLI 405
             L + + S  G  + 
Sbjct: 1402 QLTSISLSADGSLIA 1416



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 68/178 (38%), Gaps = 11/178 (6%)

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
             D   + L +   ++  + +        +   S +GK+   +V+KD    ++ ++L+   
Sbjct: 1151 GDDKTIRLWEIENNQQVEELSPIEGQFKSLSISPDGKQLA-AVKKDGT--VHLLELKRKD 1207

Query: 294  TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             ++  +         +SPD  Q+      + +  + ++  NG +  +  +  E +    +
Sbjct: 1208 LKQFKDIKGKISQIIFSPDGQQLAAL---DEENTIRILNLNGKELYKPKKI-EKTISQLI 1263

Query: 354  WSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            +S  G  +A            I + + + S+ + L + S    P   P    ++F+  
Sbjct: 1264 FSRDGQQLAAMHCDYTICDSTIHLFELN-SKTKTLKKVSKKSYPRVYPES-HIVFNSD 1319



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 56/149 (37%), Gaps = 14/149 (9%)

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            F+S+  R LI+  +D  + +   D +     ++ +     ++   + D S +    D   
Sbjct: 861  FTSD-HRLLIATAEDGTVRLQ--DFKGTELPKVFSGHRGEVNLDINKDGSLLATIDD--- 914

Query: 325  KEQLYVMQSNGSDQKR------ISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMK 377
            K  + +    G  ++       I   K   Y     +SP G  +   + +G    I +  
Sbjct: 915  KCTVRLWNLEGKQEEPPKLEESILHSKNCEYSTGLSFSPDGKKLVAYRKAGSDSIIYLWD 974

Query: 378  KDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
              G++ +LL     N    +++   + ++
Sbjct: 975  LTGNEPKLLKNAQDNFMTISFNSDNQLVV 1003



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 7/106 (6%)

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDR 322
             FS +GK+ +   +      IY  DL  N  + L N     ++ S++ D+  +V   SD 
Sbjct: 950  SFSPDGKKLVAYRKAGSDSIIYLWDLTGNEPKLLKNAQDNFMTISFNSDNQLVVATQSDN 1009

Query: 323  EGKEQLYVMQSNGSDQK------RISQDKEASYFDPVWSPQGDLIA 362
              +   ++  +   + K      R        Y + V+SP G+  A
Sbjct: 1010 TLRLSDFMFGTQLEEFKHNDRLNRCYFCDYELYDNLVFSPDGNYFA 1055


>gi|170063451|ref|XP_001867109.1| aladin [Culex quinquefasciatus]
 gi|167881083|gb|EDS44466.1| aladin [Culex quinquefasciatus]
          Length = 478

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 47/225 (20%), Positives = 84/225 (37%), Gaps = 22/225 (9%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +D  G   +     +  I +  R+ PN  K+A A  DD     + +        P     
Sbjct: 138 VDSIGKYTQTKEWHKSSIRYI-RWHPNCFKIAIAASDD----SIRIYSDEPTIVPILKSG 192

Query: 256 FRSMILAPRFS--SNGKRALISVQKDEAMDIYSVDLQSNATERLTN-------TLFINIS 306
            +  I +  +   ++G+ A+    ++ A+ I+SVD  S  T  L+          F   S
Sbjct: 193 LQKSISSMAWRNLTSGELAV--GCQNGAL-IWSVDPNSLITRPLSQAVQLKHGNHFPVTS 249

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SP+   +   S  +    + +   + S Q  + +          WSP G  +  +  
Sbjct: 250 VEWSPNGCLLATASIND--SDVLIWDVDQSKQVPLRRVGPPCALLK-WSPTGSKLC-STT 305

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            G  F +    K  S +R  V    +Q+  WS S   L+F   +D
Sbjct: 306 VGGVFRVWQTNKW-SPDRWTVNQGTIQSVVWSRSDSHLLFVTSED 349


>gi|73537630|ref|YP_297997.1| YVTN beta-propeller repeat-containing protein [Ralstonia eutropha
           JMP134]
 gi|72120967|gb|AAZ63153.1| 40-residue YVTN beta-propeller repeat [Ralstonia eutropha JMP134]
          Length = 493

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 59/159 (37%), Gaps = 14/159 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+++ +A  +     +  +      I    + +           ++ +GK   ++V+ 
Sbjct: 96  FSPDRRTLAVVSIGSNSVSFIDTATNAI----QHVTYVGRSPHEAFYTPDGKEVWVTVR- 150

Query: 279 DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                I  +D ++     R+T      +   +SPD       S    +  +  +    +D
Sbjct: 151 -GENYISVIDAKTFGEKTRITVAAGPGMQ-IFSPDGKYGYICSSFNPETAVVTV----AD 204

Query: 338 QKRISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAIG 374
            K +++ K+ S F P    +P G  + FT     K  + 
Sbjct: 205 HKVVARVKQESPFCPNIAATPDGSQVWFTLKDVGKTQVF 243



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 77/215 (35%), Gaps = 13/215 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ ++V + T   E+ + V    T  ++    +     M +   FS +GK   I    + 
Sbjct: 140 PDGKEV-WVTVRGENYISVIDAKTFGEKTRITVAAGPGMQI---FSPDGKYGYICSSFNP 195

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              + +V        R+        + + +PD SQ+ F     GK Q++  +      K 
Sbjct: 196 ETAVVTV-ADHKVVARVKQESPFCPNIAATPDGSQVWFTLKDVGKTQVFEARPPFRMIKT 254

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SP 399
           I      ++ +   +  G   A+    G    + V + D   +   +   +L    W S 
Sbjct: 255 IETGPITNHVNFAHTAAGTF-AYITI-GGLNQVKVFRTDDFSQVATIPVGSLPHGLWPSG 312

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            G+ +        +    L +ID    N+ + N P
Sbjct: 313 DGKRIY----VGLENADSLAAIDTE-TNKVVANVP 342



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/102 (13%), Positives = 37/102 (36%), Gaps = 6/102 (5%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +   S   G   +  + +  +  + ++    + +    ++P G  + +    G
Sbjct: 96  FSPDRRTLAVVSI--GSNSVSFIDTATNAIQHVTYVGRSPHEAF-YTPDGKEV-WVTVRG 151

Query: 369 EKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           E + I V+      ++  +   +      +SP G+       
Sbjct: 152 ENY-ISVIDAKTFGEKTRITVAAGPGMQIFSPDGKYGYICSS 192


>gi|291393689|ref|XP_002713238.1| PREDICTED: N-acylaminoacyl-peptide hydrolase [Oryctolagus
           cuniculus]
          Length = 732

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 51/131 (38%), Gaps = 17/131 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------DDEDILRVYL 241
             +++L  +D  G     L+      +  PR SP+Q ++ Y  Y           L +Y 
Sbjct: 277 NRRSALYYVDLTGGKYELLSDD-SLAISSPRLSPDQCRIVYLRYPSLVPHHQCSQLCLYD 335

Query: 242 MDTRIDRA-----PKRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQS 291
             T++        P+++G   S I         +S++ +R +    +    D++ VD Q+
Sbjct: 336 WYTKVTSVVVDIVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFVVDTQT 395

Query: 292 NATERLTNTLF 302
            +   LT    
Sbjct: 396 GSVTSLTAGGS 406



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 72/222 (32%), Gaps = 31/222 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNS--LCVMDRDGANIRYLTPSRDQILFEP 217
           D+  +    ++     + +F  +   S + K++  LCV+D +  NI  L    + +    
Sbjct: 189 DETARPKKPDQAVKGDQFVFYEDWGESMVSKSTPVLCVLDVESGNISVLEGVPENVSPGQ 248

Query: 218 R-FSPNQQKVAYATYDDEDIL----------RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             ++P    V +  +  E                          + + +    I +PR S
Sbjct: 249 AFWAPGDTGVVFVGWWHEPFRLGIRFCTNRRSALYYVDLTGGKYELLSDDSLAISSPRLS 308

Query: 267 SNGKRALISVQKDEAM-----DIYSVDLQSNA--------TERLT-NTLFINIS----AS 308
            +  R +               +   D  +            +L  N   I  S      
Sbjct: 309 PDQCRIVYLRYPSLVPHHQCSQLCLYDWYTKVTSVVVDIVPRQLGENFSGIYCSLLPLGC 368

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +S DS ++VF+S +  ++ L+V+ +       ++       +
Sbjct: 369 WSADSQRVVFDSAQRSRQDLFVVDTQTGSVTSLTAGGSGGSW 410



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 40/143 (27%), Gaps = 21/143 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ---- 327
                 +     +Y VDL     E L++      S   SPD  +IV+             
Sbjct: 272 IRFCTNR--RSALYYVDLTGGKYELLSDDSLAISSPRLSPDQCRIVYLRYPSLVPHHQCS 329

Query: 328 ---LYVMQSNGSD------QKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIG 374
              LY   +  +        +++ ++    Y        WS     + F      +  + 
Sbjct: 330 QLCLYDWYTKVTSVVVDIVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLF 389

Query: 375 VMKKDGSQERLLVEDSNLQAPTW 397
           V+         L    +    +W
Sbjct: 390 VVDTQTGSVTSLTAGGSGG--SW 410


>gi|303281662|ref|XP_003060123.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458778|gb|EEH56075.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 878

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 68/215 (31%), Gaps = 10/215 (4%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +       Y        +    +SP+   +A A+ D+     V +          
Sbjct: 334 QLLVWEWQSETYVYKQQGHYYDVNACAYSPDGALIATASDDN----TVKVWSAATGSCFV 389

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYS 310
                   + A  F  +G  A++S   D  +  + + ++    + LT+      +S +  
Sbjct: 390 TFDEHSGPVGAVCFLPSG-HAVLSASMDGTVRAFDL-MRYRNFKTLTSPDPCQFVSLAVD 447

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P    +   S      Q+++          I    +       +SP+  L+A   +    
Sbjct: 448 PSGEIVCAGS--LDTFQIHIWSLKTGRLLDIFAGHQGPVNALCFSPESPLLASGSWDKTV 505

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
               V      Q  +L    ++ A  + P G+ L 
Sbjct: 506 RLWDVYD-GRGQTDVLQHAHDVLAVAFRPDGKQLA 539


>gi|120437300|ref|YP_862986.1| dipeptidyl-peptidase IV [Gramella forsetii KT0803]
 gi|117579450|emb|CAL67919.1| dipeptidyl-peptidase IV [Gramella forsetii KT0803]
          Length = 736

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 62/165 (37%), Gaps = 12/165 (7%)

Query: 281 AMDIYSVDLQSNATERL---TNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +D+  VD + N    +   T+  +++   + ++  D+S  ++ S+++G   +Y     G
Sbjct: 312 NLDLIFVDAEDNDATVVLNETDEAYVDITDNLTFLEDNS-FIWTSEQDGYNHIYHYDEQG 370

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQ 393
               +++           +  + D I +           +  +K +G  ++ L E + + 
Sbjct: 371 ELLDQVTSGDWEVTNYYGYDKKADKIYYQSTENGSVNRDVYSVKPNGKNKKRLTERTGMN 430

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSI--DLNGRNETLINTPAY 436
           + ++S       F           +Y++    +G+    I   + 
Sbjct: 431 SASFSAD--YTYFINSFTNVETPHVYTLHRTKDGKQVREILNNSE 473



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 68/178 (38%), Gaps = 37/178 (20%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS------VQKDEAM 282
            +Y      R  L    +D    +I +F+      +FS    + L+S       ++    
Sbjct: 69  YSYKSGKKTRTLLSSNDLD----KIDSFQGF----KFSKKEDKILLSTEVEPIYRRSSRE 120

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
             Y  D++S   ++++        AS+SPD+S++ +  D      +Y++    +++ +++
Sbjct: 121 IFYVYDVKSKDLKKVSEDK--VQEASFSPDASKLAYVFD----NNIYILDLKTNERTQVT 174

Query: 343 QDKEASYF-----------------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +D E +                      W+P G+ +AF KF   +     M   G   
Sbjct: 175 KDGEINSTINGITDWVYEEEFSFVKAFEWNPTGEKLAFLKFDETEVPEFSMDLFGKDL 232



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 59/136 (43%), Gaps = 11/136 (8%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREG--KEQLY 329
           + + ++D    IY  D Q    +++T+  +   +   Y   + +I ++S   G     +Y
Sbjct: 352 IWTSEQDGYNHIYHYDEQGELLDQVTSGDWEVTNYYGYDKKADKIYYQSTENGSVNRDVY 411

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK--DGSQERLLV 387
            ++ NG ++KR+++    +     +S        +  + E   +  + +  DG Q R ++
Sbjct: 412 SVKPNGKNKKRLTERTGMN--SASFSADYTYFINSFTNVETPHVYTLHRTKDGKQVREIL 469

Query: 388 EDSNL---QAPT-WSP 399
            +S L     P  +SP
Sbjct: 470 NNSELLKKNEPYGFSP 485


>gi|322828592|gb|EFZ32330.1| hypothetical protein TCSYLVIO_1329 [Trypanosoma cruzi]
          Length = 531

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 64/187 (34%), Gaps = 17/187 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G      T  RD ++     SP+ + +A  + D     +  L+   I      I     +
Sbjct: 270 GKEEGIFTGHRDLVICT-AVSPDGKYLATTSKD-----QTMLIWDAIITKVLHILRHGMV 323

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           ++   FS +    ++S  +D    ++ V  +       +    I +S ++SPD + +   
Sbjct: 324 VICCCFSPDSNT-VVSGCQDRVCRLWDV-RKGKERVAYSKHAGIIVSVAFSPDGNYVCST 381

Query: 320 S-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           S DR     L+V  +   +                ++  G  I     S ++  + V   
Sbjct: 382 SADRT----LHVWSATTGNTYLKLSGHVGIVLACSYTSDGQYII----SNDETHLCVWSA 433

Query: 379 DGSQERL 385
                +L
Sbjct: 434 ADGSCQL 440



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 68/220 (30%), Gaps = 26/220 (11%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P ++     + ++     V L      +        R +++    S +GK    +  KD+
Sbjct: 247 PKERSFVSCSSEE---ASVTLRSLVTGKEEGIFTGHRDLVICTAVSPDGKYLA-TTSKDQ 302

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQ 338
            M I+  D        +     + I   +SPDS+ +V      G       +       +
Sbjct: 303 TMLIW--DAIITKVLHILRHGMVVICCCFSPDSNTVV-----SGCQDRVCRLWDVRKGKE 355

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPT 396
           +              +SP G+ +  T        + V         L +      + A +
Sbjct: 356 RVAYSKHAGIIVSVAFSPDGNYVCSTSADRT---LHVWSATTGNTYLKLSGHVGIVLACS 412

Query: 397 WSPSGRSLI--------FSRKKDGDTGSKLYSIDLNGRNE 428
           ++  G+ +I             DG    +L   +L G+  
Sbjct: 413 YTSDGQYIISNDETHLCVWSAADGSCQLRLAVTELAGKTR 452



 Score = 43.5 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 73/214 (34%), Gaps = 27/214 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+   V     D        L D R  +          +I++  FS +G     S   
Sbjct: 329 FSPDSNTVVSGCQDR----VCRLWDVRKGKERVAYSKHAGIIVSVAFSPDGNYVC-STSA 383

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--------SDREGKEQLYV 330
           D  + ++S     N   +L+  + I ++ SY+ D   I+          S  +G  QL +
Sbjct: 384 DRTLHVWSA-TTGNTYLKLSGHVGIVLACSYTSDGQYIISNDETHLCVWSAADGSCQLRL 442

Query: 331 MQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
             +      +  S+  + ++     +P G    +   +     + ++      E+     
Sbjct: 443 AVTELAGKTRGTSRAGKLAWTSSCAAP-GAFTQYMAVACTNRFVYILDICNGSEK---SS 498

Query: 390 SNLQAPTWSPSGRS---LIFSRKKDGDTGSKLYS 420
              +AP +  +G     + F     GD    LY 
Sbjct: 499 VFCKAPVYCLTGGYKEKIAF-----GDNFGNLYV 527


>gi|295837998|ref|ZP_06824931.1| peptide hydrolase [Streptomyces sp. SPB74]
 gi|295826787|gb|EFG65047.1| peptide hydrolase [Streptomyces sp. SPB74]
          Length = 612

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 67/180 (37%), Gaps = 15/180 (8%)

Query: 262 APRFS--------SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           APR S         +  R+L         ++Y+ D  + A  ++T+        + SPD 
Sbjct: 27  APRVSLPEWAEDAPD--RSLFVSNATGTYELYAWDRATGAQRQVTDRENGTTDGTLSPDG 84

Query: 314 SQIVFESDREGKE-QLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           + I +  D +G E  ++  Q  + G D + +     A          G  +     S E 
Sbjct: 85  AWIWWFDDHDGDEFGVWRRQPFAGGEDTEALPGVAAAYSAGLALGRDGRTVVVGSSSDEH 144

Query: 371 FAI-GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRNE 428
            ++  V++  G+   +     +      S  GR L+    + GD   S L  ++L G  E
Sbjct: 145 GSLVHVVRDGGAPVEVYRHRESAGVGDLSYDGRLLVVEHTEHGDAMHSALRVLELGGTGE 204



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/282 (14%), Positives = 83/282 (29%), Gaps = 40/282 (14%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G +         D A   +    R   +  P ++ +    +    +      +Y  D R
Sbjct: 2   NGRMTTDATAKPDDAAMPDWEKRFRAPRVSLPEWAEDAPDRSLFVSNATGTYELYAWD-R 60

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
              A +++ +  +       S +G         D          +     R       + 
Sbjct: 61  ATGAQRQVTDRENGTTDGTLSPDGAWIWWFDDHDGD--------EFGVWRRQPFAGGEDT 112

Query: 306 S------ASYSP------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                  A+YS       D   +V  S  +    L  +  +G     + + +E S     
Sbjct: 113 EALPGVAAAYSAGLALGRDGRTVVVGSSSDEHGSLVHVVRDGGAPVEVYRHRE-SAGVGD 171

Query: 354 WSPQGDLIAFTKFSGEK---FAIGVMKKDGSQE--RLLVEDSNLQAPT---------WSP 399
            S  G L+             A+ V++  G+ E  R + E  + +  T         ++P
Sbjct: 172 LSYDGRLLVVEHTEHGDAMHSALRVLELGGTGEVARTVAELDDTEGGTKELGLSVMGFAP 231

Query: 400 ---SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                R L+   +++G     ++           I+ P   S
Sbjct: 232 LAGDARLLV-GTQREGRWLPMIWDPVAGTETALAIDLPGDVS 272


>gi|312115320|ref|YP_004012916.1| peptidase S9 prolyl oligopeptidase [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220449|gb|ADP71817.1| peptidase S9 prolyl oligopeptidase [Rhodomicrobium vannielii ATCC
           17100]
          Length = 631

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 51/276 (18%), Positives = 95/276 (34%), Gaps = 28/276 (10%)

Query: 115 RVIKEGKDRLRVEF-RLWDVKDRKQ-IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           RV + G     V    L+ V D  Q I   +     A+       + D  +  I  + G 
Sbjct: 74  RVHEYGGGEFTVAGGALYFVNDGDQDIYEARLTPEGAAAPCRITELPDTRFADIALDAG- 132

Query: 173 FNSRILFVSESVVSGIIK---NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
             +R++ V E+   G      N+L  +  DG+  R L    D     PR SP+   +AY 
Sbjct: 133 -RNRLIAVGETHGVGETTEPVNALWSIPLDGSAPRVLVEGHDFYA-SPRVSPDGSLLAYL 190

Query: 230 TYDDEDIL----RVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALISVQKDEAMD 283
            ++   +      +++     D A   +           F     G+  L       A +
Sbjct: 191 AWNLPHMPWDAAELFVAHLDADGAVSGVVKVAGGGGTACFQPEWTGEALLFVWDAGGAGN 250

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           ++   ++++A  ++T          +    +Q  +     G  +L  +     + +    
Sbjct: 251 LWR-WMEASAPIQITRLDGDLSLPLWV--FNQASYALLEGGNARLSYVDK--GETRAALL 305

Query: 344 DKEASYFDPVWSP---------QGDLIAFTKFSGEK 370
           D E     P+ SP          GDL AF   + ++
Sbjct: 306 DLETGALTPLVSPFTWVGALSGDGDLTAFVAMADDE 341



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 49/123 (39%), Gaps = 11/123 (8%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYV--MQSNGS 336
           ++S+ L  +A   L        S   SPD S + + +           +L+V  + ++G+
Sbjct: 155 LWSIPLDGSAPRVLVEGHDFYASPRVSPDGSLLAYLAWNLPHMPWDAAELFVAHLDADGA 214

Query: 337 --DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                +++     + F P W+  G+ + F   +G    +    +  +  ++   D +L  
Sbjct: 215 VSGVVKVAGGGGTACFQPEWT--GEALLFVWDAGGAGNLWRWMEASAPIQITRLDGDLSL 272

Query: 395 PTW 397
           P W
Sbjct: 273 PLW 275


>gi|238881847|gb|EEQ45485.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 853

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 75/221 (33%), Gaps = 31/221 (14%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDD------------EDILRVYLMDTRIDRAPKRIG 254
               + ++   +FSPN + +A  + D                      D       KR+ 
Sbjct: 33  MSRHNGVVTSLKFSPNGRWLASGSDDKICLIWEKDNTQIAKSFGTDEHDLEHWTVRKRLV 92

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              + I    +S +G   L++V  D ++ I++  L     +R      +     + P + 
Sbjct: 93  AHDNDIQDICWSPDGN-LLVTVGLDRSVIIWNA-LTFEKIKRYDIHQSMVKGIVFDPANK 150

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-------------VWSPQGDLI 361
                SD +   +++      ++        E    DP              WSP G  I
Sbjct: 151 FFATASD-DRTVRIFRYYKKLNEYNNYEFQMEHVVVDPFKKSPLTSYFRRMSWSPDGQHI 209

Query: 362 AFTKFSGEKF-AIGVMKKD--GSQERLLVEDSNLQAPTWSP 399
           A    +     ++ ++ +   GS   L+  ++ ++  ++SP
Sbjct: 210 AVPNATNGPVPSVAIINRGNWGSDISLIGHEAPVEVCSFSP 250



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 78/247 (31%), Gaps = 47/247 (19%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D +   +R    + D  + +  +SP+   +     D      V + +       KR    
Sbjct: 81  DLEHWTVRKRLVAHDNDIQDICWSPDGNLLVTVGLDR----SVIIWNALTFEKIKRYDIH 136

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYS-----------------VDLQSNATERLTN 299
           +SM+    F    K    +   D  + I+                  V +       LT+
Sbjct: 137 QSMVKGIVFDPANKFFA-TASDDRTVRIFRYYKKLNEYNNYEFQMEHVVVDPFKKSPLTS 195

Query: 300 TLFINISASYSPDSSQIVFESDREGK-EQLYVMQSN--GSDQKRISQDKEASYFDPVWSP 356
                   S+SPD   I   +   G    + ++     GSD   I    EA      +SP
Sbjct: 196 YF---RRMSWSPDGQHIAVPNATNGPVPSVAIINRGNWGSDISLI--GHEAPVEVCSFSP 250

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-P---------------TWSPS 400
               IA T  + E+     +   G Q+R L   S   + P                WSP 
Sbjct: 251 TLFQIADT-PANEEIKFQTVVATGGQDRTLAIWSTCNSRPIVVCSDIVDSSITDICWSPD 309

Query: 401 GRSLIFS 407
           G +L FS
Sbjct: 310 GETLYFS 316


>gi|218199283|gb|EEC81710.1| hypothetical protein OsI_25319 [Oryza sativa Indica Group]
 gi|222636641|gb|EEE66773.1| hypothetical protein OsJ_23498 [Oryza sativa Japonica Group]
          Length = 631

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 76/242 (31%), Gaps = 27/242 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L       ++   FSP    +  ++ D      + L +T+++            +   +
Sbjct: 374 TLFQGHSGPVYSAMFSPIGDFLLSSSADS----TIRLWNTKLNANLVCYKGHNYPVWDVQ 429

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           FS  G     S   D    I+S+D       R+      ++    +  + + I   S   
Sbjct: 430 FSPVGHYFA-SASHDRTARIWSMDKI--QPLRIMAGHLSDVDCVQWHVNCNYIATGSS-- 484

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +      +  R+     +       SP G  +A     G      +M  D S  
Sbjct: 485 -DKTVRLWDVQTGECIRMFIGHRSMVLSLAMSPDGRYMASGDEDGT-----IMMWDISSG 538

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFS------RKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           R +       +  WS     L +S           D   KL+ +  + +   + +T   +
Sbjct: 539 RCVSPLVGHNSCVWS-----LAYSCEGALLASGSADCTVKLWDVASSTKTLKMDDTKGGS 593

Query: 438 SD 439
           ++
Sbjct: 594 AN 595



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 60/196 (30%), Gaps = 35/196 (17%)

Query: 128 FRLWDVKDRKQII---GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            RLW+ K    ++   G  +      +  + H  +   +                     
Sbjct: 404 IRLWNTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTA----------------- 446

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   +  MD+    +R +      +    ++  N   +A  + D      V L D 
Sbjct: 447 -------RIWSMDKI-QPLRIMAGHLSDVDCV-QWHVNCNYIATGSSDK----TVRLWDV 493

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +     +     RSM+L+   S +G+    S  +D  + ++ +         L       
Sbjct: 494 QTGECIRMFIGHRSMVLSLAMSPDGRYMA-SGDEDGTIMMWDIS-SGRCVSPLVGHNSCV 551

Query: 305 ISASYSPDSSQIVFES 320
            S +YS + + +   S
Sbjct: 552 WSLAYSCEGALLASGS 567


>gi|158295221|ref|XP_316089.4| AGAP006042-PB [Anopheles gambiae str. PEST]
 gi|158295223|ref|XP_556722.2| AGAP006042-PA [Anopheles gambiae str. PEST]
 gi|157015931|gb|EAA11448.4| AGAP006042-PB [Anopheles gambiae str. PEST]
 gi|157015932|gb|EAL39985.2| AGAP006042-PA [Anopheles gambiae str. PEST]
          Length = 1030

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 59/149 (39%), Gaps = 18/149 (12%)

Query: 196 MDRDGANIR--YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
              DG  ++   +       ++  +FSP+ +++A  +   +D   +      +    +  
Sbjct: 627 CSADGFPLQPLQVLNDHSDEVWFCKFSPDGRRLATGS---KDNSVIVWEVDPVKLLLRNK 683

Query: 254 GNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINIS--- 306
            +F           +S + K   I+   D+  D++  D++    + +T  +   + S   
Sbjct: 684 RSFEGHTYGVSYIAWSPDSKH-FIACGPDDCPDLWIWDVE--QEKLVTKFSHSTDDSLTC 740

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           A+++ D ++ V    R    Q Y++  +G
Sbjct: 741 AAFNRDGTRFVTGGTRG---QFYLVDLDG 766


>gi|87310688|ref|ZP_01092816.1| probable serine/threonine-protein kinase pknB [Blastopirellula marina
            DSM 3645]
 gi|87286669|gb|EAQ78575.1| probable serine/threonine-protein kinase pknB [Blastopirellula marina
            DSM 3645]
          Length = 1741

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 22/226 (9%), Positives = 76/226 (33%), Gaps = 15/226 (6%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +G I+  L + D        +  +  + +    +S + + +A     ++ +  V+ +   
Sbjct: 1158 TGDIRGDLRIWDIQTNKAILIKTAHTKRIRSLAWSHSGELLASGGDWEDHMAAVWTLTGE 1217

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 ++  +   +   P       ++ ++         +  +L++ +     +      
Sbjct: 1218 PRIRVRQGSSVSQISWHPS-----DQSFVTGGASGYFQSW--NLENGSHLFEGHHPTSIG 1270

Query: 306  SASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + +YSP+   +       G +  +++  +    + ++            WSP    +   
Sbjct: 1271 ATAYSPNGEWLAVAGGNNGTDNSIHIWNAANWTENQVLSGHIRQVNGLAWSPDSQHLVSA 1330

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDSNLQ-----APTWSPSGRSLI 405
                +     ++   G++ + +   S +      +  WS  G S++
Sbjct: 1331 GQDAKARLWELVN--GNKLKSMYHRSPIGLCPVISVVWSRDGESIL 1374



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 79/246 (32%), Gaps = 32/246 (13%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA----------------HTISDDIY 163
                +R + R+WD++  K I+ K   +     R +A                H  +    
Sbjct: 1157 ATGDIRGDLRIWDIQTNKAILIK--TAHTKRIRSLAWSHSGELLASGGDWEDHMAAVWTL 1214

Query: 164  ---QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RF 219
                 I   +G   S+I +            S      +  N  +L             +
Sbjct: 1215 TGEPRIRVRQGSSVSQISWHPSDQSFVTGGASGYFQSWNLENGSHLFEGHHPTSIGATAY 1274

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SPN + +A A  ++     +++ +       + +      +    +S + +  + S  +D
Sbjct: 1275 SPNGEWLAVAGGNNGTDNSIHIWNAANWTENQVLSGHIRQVNGLAWSPDSQHLV-SAGQD 1333

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNG 335
                ++ + +  N  + + +   I +       +S D   I+      G +      ++G
Sbjct: 1334 AKARLWEL-VNGNKLKSMYHRSPIGLCPVISVVWSRDGESIL----STGIDGCRQWDASG 1388

Query: 336  SDQKRI 341
             ++  +
Sbjct: 1389 VERSHL 1394



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 20/126 (15%)

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S + SPD + I     R   +++ V+ ++G  +     D  +S     WS  G  +A   
Sbjct: 1528 SFTVSPDGAHIA---VRTASQKIIVLPADGGKRHAEFPDSHSSC----WSADGKRLAIGT 1580

Query: 366  FSGEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSPSGRSLIFSRKK-------DGDTGS 416
             +G    + ++      +   L      ++A ++ P G  ++ S  +        G+   
Sbjct: 1581 RTG----VLLIDTATWKTNCELSGGAGLIRAVSFHPDGTQVVASDGRSVLRWSTSGEAWP 1636

Query: 417  KLYSID 422
            +L S D
Sbjct: 1637 ELVSYD 1642



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 76/229 (33%), Gaps = 15/229 (6%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
               P+  +VA A      I  +           + + N  + I A  +    +  L +  
Sbjct: 1107 ALHPDSTRVALAFDKQIKIYSLPDFHLE-----RVLANHPTEISALDWHPK-QEVLATGD 1160

Query: 278  KDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                + I+  D+Q+N    + T       S ++S     +   S  + ++ +  + +   
Sbjct: 1161 IRGDLRIW--DIQTNKAILIKTAHTKRIRSLAWSHSGELLA--SGGDWEDHMAAVWTLTG 1216

Query: 337  DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +  RI   + +S     W P      F       +      ++GS        +++ A  
Sbjct: 1217 EP-RIRVRQGSSVSQISWHPSDQS--FVTGGASGYFQSWNLENGSHLFEGHHPTSIGATA 1273

Query: 397  WSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRNETLINTPAYASDPQWVG 444
            +SP+G  L  +   +G   S  +++      N+ L       +   W  
Sbjct: 1274 YSPNGEWLAVAGGNNGTDNSIHIWNAANWTENQVLSGHIRQVNGLAWSP 1322



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 9/83 (10%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            + V+  DG       P          +S + +++A  T        V L+DT   +    
Sbjct: 1547 IIVLPADGGKRHAEFPDSHSSC----WSADGKRLAIGTRTG-----VLLIDTATWKTNCE 1597

Query: 253  IGNFRSMILAPRFSSNGKRALIS 275
            +     +I A  F  +G + + S
Sbjct: 1598 LSGGAGLIRAVSFHPDGTQVVAS 1620


>gi|68472703|ref|XP_719670.1| hypothetical protein CaO19.9647 [Candida albicans SC5314]
 gi|68472960|ref|XP_719545.1| hypothetical protein CaO19.2099 [Candida albicans SC5314]
 gi|74680156|sp|Q5ACW8|HIR1_CANAL RecName: Full=Protein HIR1
 gi|46441367|gb|EAL00665.1| hypothetical protein CaO19.2099 [Candida albicans SC5314]
 gi|46441497|gb|EAL00794.1| hypothetical protein CaO19.9647 [Candida albicans SC5314]
          Length = 853

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/221 (15%), Positives = 75/221 (33%), Gaps = 31/221 (14%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDD------------EDILRVYLMDTRIDRAPKRIG 254
               + ++   +FSPN + +A  + D                      D       KR+ 
Sbjct: 33  MSRHNGVVTSLKFSPNGRWLASGSDDKICLIWEKDNTQIAKSFGTDEHDLEHWTVRKRLV 92

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              + I    +S +G   L++V  D ++ I++  L     +R      +     + P + 
Sbjct: 93  AHDNDIQDICWSPDGN-LLVTVGLDRSVIIWNA-LTFEKIKRYDIHQSMVKGIVFDPANK 150

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-------------VWSPQGDLI 361
                SD +   +++      ++        E    DP              WSP G  I
Sbjct: 151 FFATASD-DRTVRIFRYYKKLNEYNNYEFQMEHVVVDPFKKSPLTSYFRRMSWSPDGQHI 209

Query: 362 AFTKFSGEKF-AIGVMKKD--GSQERLLVEDSNLQAPTWSP 399
           A    +     ++ ++ +   GS   L+  ++ ++  ++SP
Sbjct: 210 AVPNATNGPVPSVAIINRGNWGSDISLIGHEAPVEVCSFSP 250



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/247 (19%), Positives = 78/247 (31%), Gaps = 47/247 (19%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D +   +R    + D  + +  +SP+   +     D      V + +       KR    
Sbjct: 81  DLEHWTVRKRLVAHDNDIQDICWSPDGNLLVTVGLDR----SVIIWNALTFEKIKRYDIH 136

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYS-----------------VDLQSNATERLTN 299
           +SM+    F    K    +   D  + I+                  V +       LT+
Sbjct: 137 QSMVKGIVFDPANKFFA-TASDDRTVRIFRYYKKLNEYNNYEFQMEHVVVDPFKKSPLTS 195

Query: 300 TLFINISASYSPDSSQIVFESDREGK-EQLYVMQSN--GSDQKRISQDKEASYFDPVWSP 356
                   S+SPD   I   +   G    + ++     GSD   I    EA      +SP
Sbjct: 196 YF---RRMSWSPDGQHIAVPNATNGPVPSVAIINRGNWGSDISLI--GHEAPVEVCSFSP 250

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-P---------------TWSPS 400
               IA T  + E+     +   G Q+R L   S   + P                WSP 
Sbjct: 251 TLFQIADT-PANEEIKFQTVVATGGQDRTLAIWSTCNSRPIVVCSDIVDSSITDICWSPD 309

Query: 401 GRSLIFS 407
           G +L FS
Sbjct: 310 GETLYFS 316


>gi|329960811|ref|ZP_08299117.1| hypothetical protein HMPREF9446_00678 [Bacteroides fluxus YIT
           12057]
 gi|328532412|gb|EGF59213.1| hypothetical protein HMPREF9446_00678 [Bacteroides fluxus YIT
           12057]
          Length = 1333

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 54/145 (37%), Gaps = 26/145 (17%)

Query: 268 NGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFE---- 319
           +G R + +    D   +I+ V L     + L +    ++     +Y PD   I       
Sbjct: 433 DGDRVMFTATMPDNRWNIHEVKLDGTGFKALVDNEEPDLEFYDGTYLPDGRLIATSNIGY 492

Query: 320 --------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                   SD  G   LY       D +RI+ D++A++ +PV    G  + +T++     
Sbjct: 493 QGVPCVNGSDPVGNMVLY--DPQTKDMRRITFDQDANW-NPVVMNNGR-VMYTRWEYTDL 548

Query: 372 AIGV------MKKDGSQERLLVEDS 390
                     M  DG++++ L    
Sbjct: 549 MHYYSRFVMHMNPDGTEQKALYGSG 573


>gi|329954667|ref|ZP_08295727.1| hypothetical protein HMPREF9445_00560 [Bacteroides clarus YIT
           12056]
 gi|328527208|gb|EGF54212.1| hypothetical protein HMPREF9445_00560 [Bacteroides clarus YIT
           12056]
          Length = 1311

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 55/145 (37%), Gaps = 26/145 (17%)

Query: 268 NGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFE---- 319
           +GKR + +    D   +I+ V L     + L   +  ++     +Y PD   I       
Sbjct: 412 DGKRVMFTATMPDNRWNIHEVKLDGTGYKPLLKMVEPDLEFYDGTYLPDGRLIAISNVGY 471

Query: 320 --------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                   SD  G   LY       + +RI+ D++A++ +PV    G  + +T++     
Sbjct: 472 QGVPCVSGSDPVGNMMLY--DPETENLRRITFDQDANW-NPVVMHNGR-VMYTRWEYTDL 527

Query: 372 AIGV------MKKDGSQERLLVEDS 390
                     M  DG++++ L    
Sbjct: 528 MHYYSRFVMHMNPDGTEQKALFGSG 552


>gi|291514405|emb|CBK63615.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Alistipes
           shahii WAL 8301]
          Length = 643

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 81/238 (34%), Gaps = 20/238 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SV 276
            SP+ +  +Y     E    +++     D A  RI + R   LA  F +N  R L     
Sbjct: 41  ISPDGKYFSYMA-PWESRRNIFVQQVGSDEAV-RITSERERDLAGYFWANDSRILYLKDT 98

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP----DSSQIVFESDREGKEQL---Y 329
             DE   +Y V++     +  T    +  +    P    DS  I+  ++R    Q+   Y
Sbjct: 99  GGDENFQLYGVNIDGTDPKAYTAVPGVRTT-IIDPLEEIDSLMIIGTNER--NPQIFDPY 155

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +  N  ++  + ++                +A+    G    I   + +  + R ++  
Sbjct: 156 RLNLNTGEKTLLCENPGDVQGWQTDHDGKLRVAYAVVDGVNTQIRYRESEAEEFRPVLTT 215

Query: 390 SNLQAPTWS---PSGRSLIFSRKKDGDTGSKLYSIDLNG--RNETLINTPAYASDPQW 442
           +  +  +++   P  R + ++    G     L  +D       E L     Y     W
Sbjct: 216 NFKEGVSFATFTPDNRMV-YAITNLGRDKDALVLMDPATCEEKEVLYTNDTYDLAGVW 272



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 35/87 (40%), Gaps = 3/87 (3%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSP 399
           +  + +   D   SP G   ++      +  I V +    +   +    + +L    W+ 
Sbjct: 29  TFFRNSEKSDYQISPDGKYFSYMAPWESRRNIFVQQVGSDEAVRITSERERDLAGYFWAN 88

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             R +++ +   GD   +LY ++++G 
Sbjct: 89  DSR-ILYLKDTGGDENFQLYGVNIDGT 114


>gi|237709382|ref|ZP_04539863.1| peptidase S9 [Bacteroides sp. 9_1_42FAA]
 gi|229456438|gb|EEO62159.1| peptidase S9 [Bacteroides sp. 9_1_42FAA]
          Length = 631

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 67/172 (38%), Gaps = 19/172 (11%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG- 324
           S +GK        +  ++++  ++ S+   R+T+    +++ S   +  +I++  D  G 
Sbjct: 44  SPDGKYFSYMAPYENRLNLFVQEVGSDKATRITSETVRDLAGSMWANGHRILYIKDTAGD 103

Query: 325 -KEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGVMKKDG 380
              QLY +  +G+D K  +       +  DP+ +    +I    K + + F    +  + 
Sbjct: 104 ENFQLYGVNVDGTDSKAYTAFPKVRTTIIDPLENIDSLVIIGLNKRNPQVFDPYRLNLNN 163

Query: 381 SQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +   L E   N+Q            +    +G     L  +D  G N  ++
Sbjct: 164 GELTQLAENPGNIQG-----------WMTDHNGKLRVALAIVD--GVNTQIL 202



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKD 411
            SP G   ++      +  + V +    +   +  ++  +L    W+ +G  +++ +   
Sbjct: 43  ISPDGKYFSYMAPYENRLNLFVQEVGSDKATRITSETVRDLAGSMWA-NGHRILYIKDTA 101

Query: 412 GDTGSKLYSIDLNGR 426
           GD   +LY ++++G 
Sbjct: 102 GDENFQLYGVNVDGT 116


>gi|237725053|ref|ZP_04555534.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229436791|gb|EEO46868.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 631

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 67/172 (38%), Gaps = 19/172 (11%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG- 324
           S +GK        +  ++++  ++ S+   R+T+    +++ S   +  +I++  D  G 
Sbjct: 44  SPDGKYFSYMAPYENRLNLFVQEVGSDKATRITSETVRDLAGSMWANGHRILYIKDTAGD 103

Query: 325 -KEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGVMKKDG 380
              QLY +  +G+D K  +       +  DP+ +    +I    K + + F    +  + 
Sbjct: 104 ENFQLYGVNVDGTDSKAYTAFPKVRTTIIDPLENIDSLVIIGLNKRNPQVFDPYRLNLNN 163

Query: 381 SQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +   L E   N+Q            +    +G     L  +D  G N  ++
Sbjct: 164 GELTQLAENPGNIQG-----------WMTDHNGKLRVALAIVD--GVNTQIL 202



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKD 411
            SP G   ++      +  + V +    +   +  ++  +L    W+ +G  +++ +   
Sbjct: 43  ISPDGKYFSYMAPYENRLNLFVQEVGSDKATRITSETVRDLAGSMWA-NGHRILYIKDTA 101

Query: 412 GDTGSKLYSIDLNGR 426
           GD   +LY ++++G 
Sbjct: 102 GDENFQLYGVNVDGT 116


>gi|228910192|ref|ZP_04074011.1| TolB domain protein [Bacillus thuringiensis IBL 200]
 gi|228849475|gb|EEM94310.1| TolB domain protein [Bacillus thuringiensis IBL 200]
          Length = 412

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 84/244 (34%), Gaps = 59/244 (24%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
             ++L +   DG  I+     + + +  P++S + + +AY     + +L +Y +     +
Sbjct: 35  RHHNLWI-KVDGKEIQIT---KGEYITGPKWSHDGEWLAYVKGKKQSMLELYRL-----K 85

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
             K++    S I   ++S              A  + + D++        N  F N+SA 
Sbjct: 86  DGKKVIPSHSEISNYKWSPTENIITFIF----AGTLNTFDVEKK------NADFENVSAG 135

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--------------- 348
               ++ PD  + +  S+       +     G+    + +D   +               
Sbjct: 136 VGDYAWYPDGKKFLVSSEAHLLPTGWT----GAQLYEVQKDANKNPHKMKHLYALPNEHD 191

Query: 349 ------YFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNL 392
                      WSP    I+F       +S +   + +++ DGS      + LL      
Sbjct: 192 DFLALVASGFKWSPDQKWISFLAVPTASWSADSNTLCLVRADGSRFEIVDQMLLNTQWFK 251

Query: 393 QAPT 396
            AP+
Sbjct: 252 WAPS 255



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 13/134 (9%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               ++T   +I     +S D   + +    +GK+Q  +      D K++         +
Sbjct: 45  GKEIQITKGEYI-TGPKWSHDGEWLAYV---KGKKQSMLELYRLKDGKKVIPSHS-EISN 99

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             WSP  ++I F  F+G      V KK+   E +    + +    W P G+  + S +  
Sbjct: 100 YKWSPTENIITFI-FAGTLNTFDVEKKNADFENV---SAGVGDYAWYPDGKKFLVSSEAH 155

Query: 412 ----GDTGSKLYSI 421
               G TG++LY +
Sbjct: 156 LLPTGWTGAQLYEV 169



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       + + K DG + ++  +   +  P WS  G  L + + K   +  +LY
Sbjct: 30  KVAFIRH----HNLWI-KVDGKEIQI-TKGEYITGPKWSHDGEWLAYVKGKK-QSMLELY 82

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+   +I + +  S+ +W  
Sbjct: 83  RLK-DGKK--VIPSHSEISNYKWSP 104


>gi|228469693|ref|ZP_04054661.1| immunogenic 75 kDa protein PG4 [Porphyromonas uenonis 60-3]
 gi|228308712|gb|EEK17438.1| immunogenic 75 kDa protein PG4 [Porphyromonas uenonis 60-3]
          Length = 559

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 64/186 (34%), Gaps = 40/186 (21%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDR--------------EGKEQLYVM--QSNGSDQK 339
           RL  + +   +  Y+PD + + F S R               G   L+++   + G   +
Sbjct: 57  RLLISPYAEFAPCYAPDGTILYFTSSRVPLRDMLQESEVTGLGTNNLFMIKQDAAGKWSR 116

Query: 340 RISQDKEASY----FDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKD-----GSQERL 385
             S     +       P  S  G+ + +     +        I    K      G  ER+
Sbjct: 117 PDSVPGSVNTPEDEGTPSISSDGNTLYYSYAEQSSTYDRTVQIYKASKSSQGGWGKGERV 176

Query: 386 LV-EDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN----GRNETL---INTPA 435
            + EDS      P    SGR L F  +  G  G  LY I L+    G+ E L   INTP 
Sbjct: 177 PIWEDSLRMAAHPAIDASGRYLYFVSEGAGLGGKDLYRIALSEHGWGKPEHLGNEINTPG 236

Query: 436 YASDPQ 441
               P 
Sbjct: 237 DELFPT 242


>gi|195350520|ref|XP_002041788.1| GM11356 [Drosophila sechellia]
 gi|195565965|ref|XP_002106564.1| GD16055 [Drosophila simulans]
 gi|194123593|gb|EDW45636.1| GM11356 [Drosophila sechellia]
 gi|194203944|gb|EDX17520.1| GD16055 [Drosophila simulans]
          Length = 313

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 57/153 (37%), Gaps = 6/153 (3%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE---DILRVYLMD 243
           G    S+ + D        + P  D  + +   SP+ + +A A          L      
Sbjct: 141 GSQNGSVFLWDVKSERHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSQDQK 200

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  K+I      IL  +FS +  R L++   D  + I+  D   +    L    + 
Sbjct: 201 MSTLHPTKKIQAHSRYILRCKFSPD-SRLLLTTSGDGTVCIWKTD-DFSKWRELRIENYW 258

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              A++S DS  + F +  +G  +L+ +Q+  +
Sbjct: 259 VWDAAFSADSKWL-FTASSDGIARLWKLQTKST 290



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 61/183 (33%), Gaps = 13/183 (7%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G     +  +D  + I+ +        R+ +      +A   P+  +I   S       
Sbjct: 91  DGNWM-FTAGEDHHVRIWDMIAAPPHCSRVFDCEAPVNAACLHPNQVEIAMGSQ---NGS 146

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS------ 381
           +++        +RI  + +AS  D   SP G  +A     G  +   +  +D        
Sbjct: 147 VFLWDVKSERHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSQDQKMSTLHP 206

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            +++      +    +SP  R L+ +    GD    ++  D   +   L     +  D  
Sbjct: 207 TKKIQAHSRYILRCKFSPDSRLLLTTS---GDGTVCIWKTDDFSKWRELRIENYWVWDAA 263

Query: 442 WVG 444
           +  
Sbjct: 264 FSA 266



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 58/161 (36%), Gaps = 15/161 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            PNQ ++A           V+L D + +R  + +    + I     S +G+    +    
Sbjct: 132 HPNQVEIA----MGSQNGSVFLWDVKSERHERIVPEVDASIQDVAISPDGRYLA-AANNK 186

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISAS------YSPDSSQIVFESDREGKEQLYVMQS 333
               I+S+  Q      L  T  I   +       +SPDS  ++  S   G   + + ++
Sbjct: 187 GNCYIWSLTSQDQKMSTLHPTKKIQAHSRYILRCKFSPDSRLLLTTS---GDGTVCIWKT 243

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +   + R  + +    +D  +S     + FT  S     + 
Sbjct: 244 DDFSKWRELRIENYWVWDAAFSADSKWL-FTASSDGIARLW 283


>gi|114593197|ref|XP_001158453.1| PREDICTED: WD repeat-containing protein 1 isoform 7 [Pan
           troglodytes]
          Length = 610

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 71/244 (29%), Gaps = 55/244 (22%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   +++P+   +A  + D    LR++    +          F   I    +
Sbjct: 57  IYTEHAHQVVVAKYAPSGFYIA--SGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAW 114

Query: 266 SSNGKRALISVQK--------------------DEAMDIYSVDLQSNATERLTNTLFINI 305
           + + KR  +  +                          I SVD++ +   RL      N 
Sbjct: 115 TEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNC 174

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A +             EG    +              D         +SP G+  A   
Sbjct: 175 AAFF-------------EGPPFKFKFTIG---------DHSRFVNCVRFSPDGNRFATAS 212

Query: 366 FSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G    I +      ++          D  + A +WSP    L+      GD  SK++ 
Sbjct: 213 ADG---QIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLL---SASGDKTSKIWD 266

Query: 421 IDLN 424
           + +N
Sbjct: 267 VSVN 270



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 86/268 (32%), Gaps = 40/268 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 13  FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTE----HAHQVVVA 68

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 69  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 128

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-------GANIRYLTP 208
                          G+       ++   +       L     D       G   ++   
Sbjct: 129 EKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFT 188

Query: 209 SRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
             D   F    RFSP+  + A A+ D     ++Y+ D +       +G  +     I A 
Sbjct: 189 IGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAI 244

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +S +    L S   D+   I+ V + S
Sbjct: 245 SWSPDSTHLL-SASGDKTSKIWDVSVNS 271


>gi|114593195|ref|XP_001158647.1| PREDICTED: WD repeat-containing protein 1 isoform 10 [Pan
           troglodytes]
          Length = 606

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 71/244 (29%), Gaps = 55/244 (22%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   +++P+   +A  + D    LR++    +          F   I    +
Sbjct: 53  IYTEHAHQVVVAKYAPSGFYIA--SGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAW 110

Query: 266 SSNGKRALISVQK--------------------DEAMDIYSVDLQSNATERLTNTLFINI 305
           + + KR  +  +                          I SVD++ +   RL      N 
Sbjct: 111 TEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNC 170

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A +             EG    +              D         +SP G+  A   
Sbjct: 171 AAFF-------------EGPPFKFKFTIG---------DHSRFVNCVRFSPDGNRFATAS 208

Query: 366 FSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G    I +      ++          D  + A +WSP    L+      GD  SK++ 
Sbjct: 209 ADG---QIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLL---SASGDKTSKIWD 262

Query: 421 IDLN 424
           + +N
Sbjct: 263 VSVN 266



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 86/268 (32%), Gaps = 40/268 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTE----HAHQVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 65  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-------GANIRYLTP 208
                          G+       ++   +       L     D       G   ++   
Sbjct: 125 EKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFT 184

Query: 209 SRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
             D   F    RFSP+  + A A+ D     ++Y+ D +       +G  +     I A 
Sbjct: 185 IGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAI 240

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +S +    L S   D+   I+ V + S
Sbjct: 241 SWSPDSTHLL-SASGDKTSKIWDVSVNS 267


>gi|56459387|ref|YP_154668.1| acylaminoacyl-peptidase [Idiomarina loihiensis L2TR]
 gi|56178397|gb|AAV81119.1| Acylaminoacyl-peptidase [Idiomarina loihiensis L2TR]
          Length = 672

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/303 (13%), Positives = 88/303 (29%), Gaps = 51/303 (16%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G +  ++   D D   +  +     + +   + SP+ Q   +           Y  D   
Sbjct: 7   GGMALAVWAADIDAREMTLMETVTTKAIRSAQLSPDGQ---FTAVIRSTPRTPYEDDDGS 63

Query: 247 DRAPKRIGNFRSMILA----------PRFSSNGKRALISV--QKDEAMDIYSVDLQSNAT 294
             +   + N      +            F    +    +   + DE  ++Y + +     
Sbjct: 64  SYSELVLINAEGEETSYLSKDKKFGRVSFGPQSEYLYFTAKEEGDEYQELYRMPVHGGGI 123

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKE----------------------QLYVMQ 332
           + +        S + S DS Q+VF S                            Q+Y + 
Sbjct: 124 QSVFEFDGNIGSYALSDDSEQLVFLSSGAKDSDEEKLEKKGFKAEVYEEDLTYTQVYHVS 183

Query: 333 S--NGSDQKRISQDKEASYFDPVWSPQGDLIAF----TKFSGEKF---AIGVMKKDGSQE 383
                ++ K ++ D + +     + P  + +      T    + +      ++  DG   
Sbjct: 184 LGEEDAEAKAVTADDQHALSV-SFHPNNEQLLVRTAPTSLIDDNYMSSQYQLISLDGEVV 242

Query: 384 RLLVEDSNLQAPTWSPSGRSLIF--SRKKDGDTGSKLYSIDLNGRNET--LINTPAYASD 439
                +S L    +SP GR L    +   +  +   L+  D   +     L +      D
Sbjct: 243 TSFESESKLGRAEFSPDGRYLAMIRAADYNDPSAGSLFVYDTREQEHRNVLPDYKGAVKD 302

Query: 440 PQW 442
             W
Sbjct: 303 FSW 305


>gi|332819202|ref|XP_001158580.2| PREDICTED: WD repeat-containing protein 1 isoform 9 [Pan
           troglodytes]
          Length = 538

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 71/244 (29%), Gaps = 55/244 (22%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   +++P+   +A  + D    LR++    +          F   I    +
Sbjct: 57  IYTEHAHQVVVAKYAPSGFYIA--SGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAW 114

Query: 266 SSNGKRALISVQK--------------------DEAMDIYSVDLQSNATERLTNTLFINI 305
           + + KR  +  +                          I SVD++ +   RL      N 
Sbjct: 115 TEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNC 174

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A +             EG    +              D         +SP G+  A   
Sbjct: 175 AAFF-------------EGPPFKFKFTIG---------DHSRFVNCVRFSPDGNRFATAS 212

Query: 366 FSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G    I +      ++          D  + A +WSP    L+      GD  SK++ 
Sbjct: 213 ADG---QIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLL---SASGDKTSKIWD 266

Query: 421 IDLN 424
           + +N
Sbjct: 267 VSVN 270



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 86/268 (32%), Gaps = 40/268 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 13  FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTE----HAHQVVVA 68

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 69  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 128

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-------GANIRYLTP 208
                          G+       ++   +       L     D       G   ++   
Sbjct: 129 EKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFT 188

Query: 209 SRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
             D   F    RFSP+  + A A+ D     ++Y+ D +       +G  +     I A 
Sbjct: 189 IGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAI 244

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +S +    L S   D+   I+ V + S
Sbjct: 245 SWSPDSTHLL-SASGDKTSKIWDVSVNS 271


>gi|326489877|dbj|BAJ94012.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 873

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 18/163 (11%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +  F   I +  F+  G     +   D    I +VD  +  ++ L          ++ P 
Sbjct: 130 VARFTLPIRSLAFNKKGALLAAAGDDDGIKLIATVD--NTISKVLKGHKGSVTGLAFDPK 187

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDP-VWSPQGDLIAFTKF 366
           +  +    D  G    + +   GS+ + +     +   + S  +   WSP G  +A    
Sbjct: 188 NDYLA-SIDSFGTVIFWDLCL-GSEARSLSCVAPTFGSDHSVKNTLCWSPDGHTLAV--- 242

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI 405
            G +  + +  +D ++E +       + P     WSP+GR L 
Sbjct: 243 PGLRNNVVMYDRDTAEE-VFTLKGEHEQPICSLCWSPNGRYLA 284


>gi|296132104|ref|YP_003639351.1| PEGA domain protein [Thermincola sp. JR]
 gi|296030682|gb|ADG81450.1| PEGA domain protein [Thermincola potens JR]
          Length = 408

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 92/230 (40%), Gaps = 28/230 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI---LAPRFSSNGKRALISVQK 278
           N+  + Y      D  ++Y  D + +       N R++    +    S++  + +  V  
Sbjct: 120 NEDIIVYTEAPQSD--KIYCYDLKNNTRTVVFENPRNISDPFITKLRSTHNHKIIFEVHN 177

Query: 279 DEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-FESDREGKEQLYVMQSN 334
            +A    DIY VDL S     LTN+  + +S     D+S +  + +      +LY+M   
Sbjct: 178 GDASQPGDIYQVDLDSGRPFNLTNSGKVIMS-----DASDVANYIAYINSDNKLYLMNLL 232

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----------KFAIGVMKKDGSQER 384
            +  K +S+    S+     SP G  +A+     E          +  + V+  +   E 
Sbjct: 233 NNKSKLVSKQPVTSF---SISPDGLKLAYIVQDKEAKQKEFDLSLQGELFVVDCENLSEI 289

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL-YSIDLNGRNETLINT 433
                   ++  WSP   SL+ + KK+ +    L + +DL  +  ++ N+
Sbjct: 290 NKQHFIGFESMKWSPDSSSLVITGKKETNNKGSLNFILDLKKKEMSIANS 339


>gi|74199510|dbj|BAE41442.1| unnamed protein product [Mus musculus]
          Length = 580

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 76/257 (29%), Gaps = 55/257 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + + D   I  +       +   +++P+   +A  + D    LR++    +       
Sbjct: 40  VILRNIDNPAIADIYTEHAHQVVVAKYAPSGFYIA--SGDISGKLRIWDTTQKEHLLKYE 97

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK--------------------DEAMDIYSVDLQSN 292
              F   I    ++ + KR  +  +                          I SVD++  
Sbjct: 98  YQPFAGKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDTGSSVGEITGHNKVINSVDIKQT 157

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RL      N +A +             EG    +              D        
Sbjct: 158 RPYRLATGSDDNCAAFF-------------EGPPFKFKFTIG---------DHSRFVNCV 195

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFS 407
            +SP G+  A     G    I +      ++          D  + A +WSP    L+  
Sbjct: 196 RFSPDGNRFATASADG---QIFIYDGKTGEKVCALGESKAHDGGIYAISWSPDSTHLL-- 250

Query: 408 RKKDGDTGSKLYSIDLN 424
               GD  SK++ +++N
Sbjct: 251 -SASGDKTSKIWDVNVN 266


>gi|70982694|ref|XP_746875.1| NACHT and WD40 domain protein [Aspergillus fumigatus Af293]
 gi|66844499|gb|EAL84837.1| NACHT and WD40 domain protein [Aspergillus fumigatus Af293]
          Length = 1717

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 75/283 (26%), Gaps = 54/283 (19%)

Query: 164  QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
               T E   F+       + + SG+    + + D             D ++    FS + 
Sbjct: 987  HGNTPESVAFSE----AGDRLASGLKNGLIKIWDTGTGGPMQTLQGHDDMVNSVAFSRDG 1042

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---------- 273
              +A  + D      V + DT      + +      + +  FS+  ++            
Sbjct: 1043 NLLASGSRDH----TVKIWDTATGDCVQILEGHNGPVTSVSFSATSEQVASGSADETIKI 1098

Query: 274  -----------------------------ISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                                         ++   D    I           +L N     
Sbjct: 1099 WDVVAGKCVQIVEVHYTVHSVAFSNADARLAAGLDGGSTIIWDTATGTQMHKLGNYRAFV 1158

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             S ++S D  ++      E    + +  +            + + F   +    D +A +
Sbjct: 1159 ESVAFSADDKRLA---SGESHGTIKIWDTATGACLHTLHGHDDTVFYVGFLRDKDRLA-S 1214

Query: 365  KFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
              S     I  M   G   R  V      + + ++S +G  L 
Sbjct: 1215 GSSDGNVKIWDM-ATGKCMRTFVGHSTGQISSLSFSATGGQLA 1256



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 84/245 (34%), Gaps = 26/245 (10%)

Query: 172  DFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             F    L   + + SG    ++ + D   G  +R         +    FS    ++A  +
Sbjct: 1200 VFYVGFLRDKDRLASGSSDGNVKIWDMATGKCMRTFVGHSTGQISSLSFSATGGQLA--S 1257

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                D   + + D  I      + + +  + +  FS++G R + S+  +  M ++  D  
Sbjct: 1258 AGFADFADIEIWDLAIVDNTTPVQSRQERVKSVTFSASGHRLV-SLSFEGTMRVW--DTL 1314

Query: 291  SNA----TERLTNTLFINISASYSPDSSQIV---FESDREGKEQLYVMQSNGSDQKRISQ 343
            +       ER  +   +  S ++S    ++    F  D      + +  +      +  +
Sbjct: 1315 TGQCICTLERPVDGPSV-ASVAFSMAGDRVASGLFNGD------IKIWDTVTGRCMQTFK 1367

Query: 344  DKEASYFDP---VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
             +  S        +S  G+ +A      +   I +      +    ++   +    +SP+
Sbjct: 1368 HQGYSLAWVQSVAFSATGEQLASCSMGSD---IKIWNTGTGKCMQTLDHFQVTLVAFSPT 1424

Query: 401  GRSLI 405
            G+ L 
Sbjct: 1425 GQRLA 1429



 Score = 40.4 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 32/291 (10%), Positives = 90/291 (30%), Gaps = 37/291 (12%)

Query: 76   SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGA-QVLVTGRVIKEGKDRLRVEFRLWDVK 134
            +   + +S  +   ++ +      F D+  +    + +          + RV+   +   
Sbjct: 1240 TGQISSLSFSATGGQLASAG----FADFADIEIWDLAIVDNTTPVQSRQERVKSVTFS-A 1294

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
               +++   F  +   W  +         +         +       + V SG+    + 
Sbjct: 1295 SGHRLVSLSFEGTMRVWDTLTGQ-CICTLERPVDGPSVASVAFSMAGDRVASGLFNGDIK 1353

Query: 195  VMDRDGANIRYLTPSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + D            +   L       FS   +++A  +        + + +T   +  +
Sbjct: 1354 IWDTVTGRCMQTFKHQGYSLAWVQSVAFSATGEQLASCSMGS----DIKIWNTGTGKCMQ 1409

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------NATERLTNTLFINI 305
             + +F+  +    FS  G+R   +  +   + ++    +         + RL+       
Sbjct: 1410 TLDHFQ--VTLVAFSPTGQRLA-AGLRGGIIKMWRTAPRYCMWKIRGHSRRLS------- 1459

Query: 306  SASYSPDSSQIVFESD-------REGKEQLYVMQSNGSDQKRISQDKEASY 349
            S  +S   +Q+   S+                M S G+  +++  D  ++Y
Sbjct: 1460 SLVFSGSGNQLASASEDFTIKVWSTATGDCIQMFSIGTSIRQLFFDPTSTY 1510



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 39/231 (16%), Positives = 82/231 (35%), Gaps = 20/231 (8%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            SE V SG    ++ + D        +      +     FS    ++A       D     
Sbjct: 1084 SEQVASGSADETIKIWDVVAGKCVQIVEVHYTVHSV-AFSNADARLA----AGLDGGSTI 1138

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + DT       ++GN+R+ + +  FS++ KR   S +    + I+  D  + A    T  
Sbjct: 1139 IWDTATGTQMHKLGNYRAFVESVAFSADDKRLA-SGESHGTIKIW--DTATGACLH-TLH 1194

Query: 301  LFINISAS--YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               +      +  D  ++   S  +G  +++ M + G   +              +S  G
Sbjct: 1195 GHDDTVFYVGFLRDKDRLASGSS-DGNVKIWDM-ATGKCMRTFVGHSTGQISSLSFSATG 1252

Query: 359  DLIAFTKFSG----EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              +A   F+     E + + ++      +        +++ T+S SG  L+
Sbjct: 1253 GQLASAGFADFADIEIWDLAIVDNTTPVQ---SRQERVKSVTFSASGHRLV 1300


>gi|329957416|ref|ZP_08297891.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           clarus YIT 12056]
 gi|328522293|gb|EGF49402.1| peptidase, S9A/B/C family, catalytic domain protein [Bacteroides
           clarus YIT 12056]
          Length = 845

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 72/226 (31%), Gaps = 42/226 (18%)

Query: 254 GNFRSMILAPRFSSNGKRAL------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
             F S + +   S NGK  L       S+++         +L++            +   
Sbjct: 202 TAFGSRVRSVSLSPNGKYLLTCYADNYSLKRS-RTRCELTELKTGRVIL----PAADEKM 256

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--- 364
            + P S+++ +      +  L V       ++ + +D    YF   WSP  D + ++   
Sbjct: 257 RWMPRSNKLYYTVTGRQRNDLVVFDPVTMREEVLLKDVPEGYF--AWSPAEDYLIYSPDD 314

Query: 365 --------------------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                                     + +      G  ERL      +     S  GR L
Sbjct: 315 KGETVSGPLKRLLHPDDRIPDVRSRNYLVKYDPATGLSERLTYGSHAVYLNDISSDGRKL 374

Query: 405 IFSRKKDGDTG-----SKLYSIDLNG-RNETLINTPAYASDPQWVG 444
           + S  K   T      + ++ +DL   R +TL+   +Y +   +  
Sbjct: 375 LCSTSKSNITQCPFSLTSIFEVDLATLRADTLVTWNSYVNRAAYSP 420



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 61/374 (16%), Positives = 113/374 (30%), Gaps = 87/374 (23%)

Query: 51  AFTKFVSIDELGGKVSEV---VSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLG 107
           A        E   + ++V   ++ DL+R   F  +   +F  ++ +    P  +      
Sbjct: 168 AVPALKCEFEKDKEFTDVDYRIAPDLKR--RFA-LHNTAFGSRVRSVSLSPNGK------ 218

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
              L+T         R R    L ++K  + I+     ++    R +    S+ +Y ++T
Sbjct: 219 --YLLTCYADNYSLKRSRTRCELTELKTGRVIL----PAADEKMRWMPR--SNKLYYTVT 270

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                              G  +N L V D        L   +D       +SP +  + 
Sbjct: 271 -------------------GRQRNDLVVFDPVTMREEVLL--KDVPEGYFAWSPAEDYLI 309

Query: 228 YATYDDEDILRVYLMDTR--------------------IDRAPKRIGNFRSMILAPRFSS 267
           Y+  D  + +   L                             +R+      +     SS
Sbjct: 310 YSPDDKGETVSGPLKRLLHPDDRIPDVRSRNYLVKYDPATGLSERLTYGSHAVYLNDISS 369

Query: 268 NGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQ----- 315
           +G++ L S  K            I+ VDL +   + L         A+YSPD  Q     
Sbjct: 370 DGRKLLCSTSKSNITQCPFSLTSIFEVDLATLRADTLVTWNSYVNRAAYSPDGGQLLVIG 429

Query: 316 --IVFES---DREGKE-------QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIA 362
             + F+    +  G         Q ++M         I++D   +     W+   G  I 
Sbjct: 430 SPMAFDGIGKNCGGHPVANDFDTQAFIMDKATKKVSPITRDFNPTVDFLQWNRVDGC-IY 488

Query: 363 FTKFSGEKFAIGVM 376
           F     +   I   
Sbjct: 489 FNTTDEDCRHIYRY 502



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 52/312 (16%), Positives = 93/312 (29%), Gaps = 46/312 (14%)

Query: 112 VTG-RVIKEGKDRLRVEFRLWDVKDRKQIIGKK-FFSSPASWRKIAHTISDDIYQSITGE 169
           V G R+  E      +  +L      K +   K  F     +  + + I+ D+ +     
Sbjct: 143 VLGLRLEPEAD--YEIVVKLLSTAADKAVPALKCEFEKDKEFTDVDYRIAPDLKRRFALH 200

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY---LTPSRDQILFEP------RFS 220
              F SR+  VS S  +G    +    +      R    LT  +   +  P      R+ 
Sbjct: 201 NTAFGSRVRSVSLS-PNGKYLLTCYADNYSLKRSRTRCELTELKTGRVILPAADEKMRWM 259

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   K+ Y T        + + D    R    + +      A  +S      + S     
Sbjct: 260 PRSNKL-YYTVTGRQRNDLVVFDPVTMREEVLLKDVPEGYFA--WSPAEDYLIYSPDDKG 316

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
                     S   +RL +           PD        D   +  L          +R
Sbjct: 317 ETV-------SGPLKRLLH-----------PDDRIP----DVRSRNYLVKYDPATGLSER 354

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDG-SQERLLVEDSNLQ 393
           ++    A Y + + S    L+  T  S          +I  +       + L+  +S + 
Sbjct: 355 LTYGSHAVYLNDISSDGRKLLCSTSKSNITQCPFSLTSIFEVDLATLRADTLVTWNSYVN 414

Query: 394 APTWSPSGRSLI 405
              +SP G  L+
Sbjct: 415 RAAYSPDGGQLL 426


>gi|296419952|ref|XP_002839555.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295635717|emb|CAZ83746.1| unnamed protein product [Tuber melanosporum]
          Length = 710

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 70/219 (31%), Gaps = 36/219 (16%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE------DILRVYLMDTRIDR 248
           + + DG     + P      F+   SP+ + VA+ +            + VY++      
Sbjct: 208 MANADGTIEAPIAPFGGADDFD--VSPDGRTVAFVSKTPYLNPANYTQVLVYIVPFDGSS 265

Query: 249 APKRI----------GNFRSMILAPRFSSNGKRALI-------SVQKDEAMDIYSVDLQS 291
            PK I                  +P+FS NG                   + IY +D  S
Sbjct: 266 KPKPINIEGKDTDGNPLPEGAASSPKFSPNGGALAYLQMYINGYESDQNNLFIYMMDSSS 325

Query: 292 NATERLTN-TLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                +T      + S S   +S D++ I   ++  G+ +++  + N    K I+   E 
Sbjct: 326 -----ITALWKPWDCSPSGLLWSGDANTIYLTAESYGRVRIFEARINDDTPKEIT--AEG 378

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +       P GD +             V      + + L
Sbjct: 379 NIVALHLLPSGDFLISRNSLTSSIGYFVFNPSSKRFKTL 417



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 44/117 (37%), Gaps = 26/117 (22%)

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-------EKFAIGVMKKDGSQER 384
            ++G+ +  I+    A  FD   SP G  +AF   +         +  + ++  DGS + 
Sbjct: 210 NADGTIEAPIAPFGGADDFD--VSPDGRTVAFVSKTPYLNPANYTQVLVYIVPFDGSSKP 267

Query: 385 LLVE------------DSNLQAPTWSPSGRSLIFSR-----KKDGDTGSKLYSIDLN 424
             +             +    +P +SP+G +L + +      +       +Y +D +
Sbjct: 268 KPINIEGKDTDGNPLPEGAASSPKFSPNGGALAYLQMYINGYESDQNNLFIYMMDSS 324


>gi|285018717|ref|YP_003376428.1| dipeptidyl peptidase iv transmembrane protein [Xanthomonas
           albilineans GPE PC73]
 gi|283473935|emb|CBA16436.1| putative dipeptidyl peptidase iv transmembrane protein [Xanthomonas
           albilineans]
          Length = 769

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/201 (13%), Positives = 63/201 (31%), Gaps = 28/201 (13%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-------------MI 260
           L  PR+  + +   +        L   +         + +    S             + 
Sbjct: 293 LSPPRWRDDGRSFTFEYNQRGHQLYRVIEADGHSGHTRTLIEETSPTFIEYSDLSGDHIN 352

Query: 261 LAPRFSSN---GKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISA-SYSPDSSQ 315
               F  +   GK+ L + ++D    +Y  D +S     ++T   ++          + Q
Sbjct: 353 GGKHFRQDLDDGKQLLWASERDGWEHLYLYDGKSGRVVRQVTRGPWVVRKVDRVDQTTRQ 412

Query: 316 IVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFS 367
           + F +      +       Y +  +G +   ++   EAS      SP G  +   +++  
Sbjct: 413 VWFTAAGMNPGEDPYYRHAYRIGLDGGEPVALTP--EASDHQVFPSPDGHWLLDLYSRVD 470

Query: 368 GEKFAIGVMKKDGSQERLLVE 388
                +    +DG+  R +  
Sbjct: 471 QAPVLVLRRGEDGTVVRTIAH 491



 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 79/287 (27%), Gaps = 70/287 (24%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPR----FSPNQQKVAYATYDDEDILRVYLMDTR 245
           + +L V   DG+    L+    +  +       +SP+  ++            VY +++ 
Sbjct: 184 QGNLVVDRADGSGKVQLSRDGGKDDYYAADSIAWSPDSSRLVAWRVTPAPPHVVYYIESA 243

Query: 246 IDRAPK-----RIGNFRSMILA------------------------------PRFSSNGK 270
                +     ++       LA                              PR+  +G+
Sbjct: 244 PADQLQPKLHQQVYAKPGDPLAVIRPVLFEVASRRAIQIDNALFPNPFELSPPRWRDDGR 303

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS-------------------- 310
                  +        ++   ++    T TL    S ++                     
Sbjct: 304 SFTFEYNQRGHQLYRVIEADGHSGH--TRTLIEETSPTFIEYSDLSGDHINGGKHFRQDL 361

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D  Q+++ S+R+G E LY+         R                Q     +   +G  
Sbjct: 362 DDGKQLLWASERDGWEHLYLYDGKSGRVVRQVTRGPWVVRKVDRVDQTTRQVWFTAAGMN 421

Query: 371 -------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSR 408
                       +  DG +   L  +++      SP G  L  ++SR
Sbjct: 422 PGEDPYYRHAYRIGLDGGEPVALTPEASDHQVFPSPDGHWLLDLYSR 468



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 57/173 (32%), Gaps = 17/173 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----SASYSPDSSQIVFE 319
            S +G++     Q +  +D        +   +L+     +      S ++SPDSS++V  
Sbjct: 172 LSPDGRQRAWVEQGNLVVDR----ADGSGKVQLSRDGGKDDYYAADSIAWSPDSSRLVAW 227

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                   + V     +   ++        +       GD +A  +     F +   +  
Sbjct: 228 RVTPAPPHV-VYYIESAPADQLQPKLHQQVYAKP----GDPLAVIR--PVLFEVASRRAI 280

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431
                L      L  P W   GRS  F   + G    ++   D  +G   TLI
Sbjct: 281 QIDNALFPNPFELSPPRWRDDGRSFTFEYNQRGHQLYRVIEADGHSGHTRTLI 333


>gi|6755995|ref|NP_035845.1| WD repeat-containing protein 1 [Mus musculus]
 gi|12230747|sp|O88342|WDR1_MOUSE RecName: Full=WD repeat-containing protein 1; AltName:
           Full=Actin-interacting protein 1; Short=AIP1
 gi|3420177|gb|AAD05043.1| Wdr1 protein [Mus musculus]
 gi|74142307|dbj|BAE31916.1| unnamed protein product [Mus musculus]
 gi|74146884|dbj|BAE41400.1| unnamed protein product [Mus musculus]
 gi|74191046|dbj|BAE39363.1| unnamed protein product [Mus musculus]
 gi|74191104|dbj|BAE39387.1| unnamed protein product [Mus musculus]
 gi|111600652|gb|AAI19359.1| WD repeat domain 1 [Mus musculus]
 gi|116138224|gb|AAI25296.1| WD repeat domain 1 [Mus musculus]
 gi|148705612|gb|EDL37559.1| WD repeat domain 1, isoform CRA_b [Mus musculus]
          Length = 606

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 76/257 (29%), Gaps = 55/257 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + + D   I  +       +   +++P+   +A  + D    LR++    +       
Sbjct: 40  VILRNIDNPAIADIYTEHAHQVVVAKYAPSGFYIA--SGDISGKLRIWDTTQKEHLLKYE 97

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK--------------------DEAMDIYSVDLQSN 292
              F   I    ++ + KR  +  +                          I SVD++  
Sbjct: 98  YQPFAGKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDTGSSVGEITGHNKVINSVDIKQT 157

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RL      N +A +             EG    +              D        
Sbjct: 158 RPYRLATGSDDNCAAFF-------------EGPPFKFKFTIG---------DHSRFVNCV 195

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFS 407
            +SP G+  A     G    I +      ++          D  + A +WSP    L+  
Sbjct: 196 RFSPDGNRFATASADG---QIFIYDGKTGEKVCALGESKAHDGGIYAISWSPDSTHLL-- 250

Query: 408 RKKDGDTGSKLYSIDLN 424
               GD  SK++ +++N
Sbjct: 251 -SASGDKTSKIWDVNVN 266


>gi|70778726|ref|NP_067474.2| WD repeat domain 8 [Mus musculus]
 gi|26342120|dbj|BAC34722.1| unnamed protein product [Mus musculus]
 gi|74152292|dbj|BAE33920.1| unnamed protein product [Mus musculus]
 gi|74227863|dbj|BAE35741.1| unnamed protein product [Mus musculus]
 gi|123229881|emb|CAM18777.1| WD repeat domain 8 [Mus musculus]
 gi|148683011|gb|EDL14958.1| WD repeat domain 8, isoform CRA_a [Mus musculus]
          Length = 462

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 81/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D     I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVIRDVTTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYRRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACQQGLTF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ ++ + +   +     R             W+P G ++A    +  
Sbjct: 142 TRDGRYLALAERRDCRDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-AWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKD 411
           ++ + +   DG   RLL           +++  WSPS + L       
Sbjct: 201 EYKVLLYSLDG---RLLSAYCAYEWSLGIKSVAWSPSSQFLAIGSYDG 245



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 9/158 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           RFS +GK     VQ      +   D+ +    +L   L       +S DS  I+    R 
Sbjct: 15  RFSPDGKYLASCVQ----YRLVIRDVTTLQILQLYTCLDQIQHIEWSADSLFILCAMYRR 70

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  Q++ ++    +      +  A      WSP G  I     +     I V        
Sbjct: 71  GLVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSV 126

Query: 384 RLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +       Q  T++  GR L  + ++D      ++ 
Sbjct: 127 SYIKYPKACQQGLTFTRDGRYLALAERRDCRDYVSIFV 164


>gi|17380346|sp|Q9JM98|WDR8_MOUSE RecName: Full=WD repeat-containing protein 8
 gi|7209721|dbj|BAA92311.1| DD57 [Mus musculus]
          Length = 462

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 81/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D     I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVIRDVTTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYRRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACQQGLTF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ ++ + +   +     R             W+P G ++A    +  
Sbjct: 142 TRDGRYLALAERRDCRDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-AWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKD 411
           ++ + +   DG   RLL           +++  WSPS + L       
Sbjct: 201 EYKVLLYSLDG---RLLSAYCAYEWSLGIKSVAWSPSSQFLAIGSYDG 245



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 9/158 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           RFS +GK     VQ      +   D+ +    +L   L       +S DS  I+    R 
Sbjct: 15  RFSPDGKYLASCVQ----YRLVIRDVTTLQILQLYTCLDQIQHIEWSADSLFILCAMYRR 70

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  Q++ ++    +      +  A      WSP G  I     +     I V        
Sbjct: 71  GLVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSV 126

Query: 384 RLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +       Q  T++  GR L  + ++D      ++ 
Sbjct: 127 SYIKYPKACQQGLTFTRDGRYLALAERRDCRDYVSIFV 164


>gi|300691446|ref|YP_003752441.1| hypothetical protein RPSI07_1797 [Ralstonia solanacearum PSI07]
 gi|299078506|emb|CBJ51160.1| Conserved protein of unknown function, putative
           6-phosphogluconolactonase [Ralstonia solanacearum PSI07]
          Length = 480

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 44/285 (15%), Positives = 83/285 (29%), Gaps = 24/285 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            S  ++             +C +     N      +       P         AYA    
Sbjct: 101 ASGGIYAVTIKTQPSAPTQICTVTAGSGNAAANVTNVVVTCVMP------PPFAYAVNMT 154

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQ 290
           ++ +  + +D          G+  S    P       +GK A ++    + +  YS+D  
Sbjct: 155 DNTVSAFTIDHASGALSAIAGSPFSTGATPSSIAADPSGKFAYVANSGSKTISAYSIDTA 214

Query: 291 SNATERLTNTLFIN----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +     +  + F      +     P                 Y + +       ++    
Sbjct: 215 TGVLTPIAGSPFAAGLSVVRGIVHPSGKFYYATVGVNNVVSAYAINTANGALTPVAGSPF 274

Query: 347 ASYFDP---VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAP---TWS 398
           A+   P      P G  +  T  S    +   +         +        + P   T +
Sbjct: 275 ATGSVPSTIAIDPSGKYLYVTNRSDNTISAYAVDATTGALSPVAGSPFGTGRYPFSITIA 334

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYASDPQW 442
           PSG+ +    + DGD    +Y+ID   G   T  ++P Y SD  W
Sbjct: 335 PSGKFVYVGSRYDGDV--WIYAIDATSGALTTTASSPIYTSDEPW 377



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 68/240 (28%), Gaps = 17/240 (7%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           + + I    G F    + V+  V +  I  +   +     +          I  +P    
Sbjct: 232 VVRGIVHPSGKFYYATVGVNNVVSAYAINTANGALTPVAGSPFATGSVPSTIAIDPS--- 288

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQK 278
              K  Y T   ++ +  Y +D          G+       P     + +GK   +  + 
Sbjct: 289 --GKYLYVTNRSDNTISAYAVDATTGALSPVAGSPFGTGRYPFSITIAPSGKFVYVGSRY 346

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINIS-----ASYSPDSSQIVFESDREGKEQLYVMQS 333
           D  + IY++D  S A    T +  I  S      + +P        +        Y + +
Sbjct: 347 DGDVWIYAIDATSGALTT-TASSPIYTSDEPWAVAIAPGGKFGYITNTTANTVAAYTVDT 405

Query: 334 NGSDQKRISQDKEASYFDPV---WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                 +++    ++   P    + P G             A   +         +   +
Sbjct: 406 TTGAFTQLAGPNTSTGNAPTSIGFDPSGKFAYVVNTLSNNIAAYNIDASTGALNAITGGT 465


>gi|242062698|ref|XP_002452638.1| hypothetical protein SORBIDRAFT_04g029600 [Sorghum bicolor]
 gi|241932469|gb|EES05614.1| hypothetical protein SORBIDRAFT_04g029600 [Sorghum bicolor]
          Length = 450

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 67/200 (33%), Gaps = 17/200 (8%)

Query: 165 SITGEKGDFNSR---ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +IT     FN+    + F++ +  SG+    +           +     +  +     SP
Sbjct: 237 AITNAVDIFNTSSGAVHFIASNNDSGVRYYDMERFQL------FKHFQFEWPVNHTSLSP 290

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +++ V        D     L+D    +    I   R    A  +S +G+    +  +D+ 
Sbjct: 291 DRKVVVIV----GDDPDGLLIDANSGKTLHSIKGHRDYSFASAWSPDGRTFA-TGNQDKT 345

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             I+ V   S +   L   L    S  ++ D     F S  E  + +++        KR 
Sbjct: 346 CRIWDVRNLSKSVHVLRGNLGAIRSIRFTSDGQ---FMSMAEPADFVHIYDVKSDYNKRQ 402

Query: 342 SQDKEASYFDPVWSPQGDLI 361
             D         +SP  D +
Sbjct: 403 ELDFFGEISGTSFSPDTDTL 422



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 52/138 (37%), Gaps = 7/138 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDR 322
             S + K  +I     +  D   +D  S      +      + ++++SPD        ++
Sbjct: 287 SLSPDRKVVVIV---GDDPDGLLIDANSGKTLHSIKGHRDYSFASAWSPDGRTFA-TGNQ 342

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +   +++ ++ N S    + +    +     ++  G  ++  + +     I  +K D ++
Sbjct: 343 DKTCRIWDVR-NLSKSVHVLRGNLGAIRSIRFTSDGQFMSMAEPAD-FVHIYDVKSDYNK 400

Query: 383 ERLLVEDSNLQAPTWSPS 400
            + L     +   ++SP 
Sbjct: 401 RQELDFFGEISGTSFSPD 418



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 37/131 (28%), Gaps = 6/131 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S SPD   +V   D        ++ +N        +      F   WSP G   A     
Sbjct: 287 SLSPDRKVVVIVGD---DPDGLLIDANSGKTLHSIKGHRDYSFASAWSPDGRTFATGNQD 343

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                  V     S   L      +++  ++  G+   F    +      +Y +  +   
Sbjct: 344 KTCRIWDVRNLSKSVHVLRGNLGAIRSIRFTSDGQ---FMSMAEPADFVHIYDVKSDYNK 400

Query: 428 ETLINTPAYAS 438
              ++     S
Sbjct: 401 RQELDFFGEIS 411


>gi|194759410|ref|XP_001961942.1| GF15223 [Drosophila ananassae]
 gi|194863129|ref|XP_001970290.1| GG10542 [Drosophila erecta]
 gi|195030138|ref|XP_001987925.1| GH10840 [Drosophila grimshawi]
 gi|195473015|ref|XP_002088792.1| GE18763 [Drosophila yakuba]
 gi|190615639|gb|EDV31163.1| GF15223 [Drosophila ananassae]
 gi|190662157|gb|EDV59349.1| GG10542 [Drosophila erecta]
 gi|193903925|gb|EDW02792.1| GH10840 [Drosophila grimshawi]
 gi|194174893|gb|EDW88504.1| GE18763 [Drosophila yakuba]
          Length = 317

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 16/184 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +SG +  +L + D    N + L      +   P  + + + + +A   + + +++
Sbjct: 120 VEDTFLSGSLDKTLRLWDLRSPNCQGLMH----LSGRPIAAYDPEGLIFAAGVNSESIKL 175

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
           Y +   D       K            +FS +GK  LIS        I  VD       +
Sbjct: 176 YDLRSFDKGPFVTFKLNQEKECDWTGLKFSRDGKTILISTN---GSVIRLVDAFHGTPLQ 232

Query: 296 RLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             T   N   I I AS+SPD SQ +F    +G+  ++   + G+    ++ D        
Sbjct: 233 TFTGYPNNKGIAIEASFSPD-SQFIFSGSTDGRVHIWNADT-GNKVSVLNGDHPGPVQCV 290

Query: 353 VWSP 356
            ++P
Sbjct: 291 QFNP 294


>gi|294629002|ref|ZP_06707562.1| conserved hypothetical protein [Streptomyces sp. e14]
 gi|292832335|gb|EFF90684.1| conserved hypothetical protein [Streptomyces sp. e14]
          Length = 339

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 61/177 (34%), Gaps = 16/177 (9%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F++R   V               + R+G +      S D   +   F+ +  +  YAT  
Sbjct: 164 FSTRAAIVDVRTGELTPTLESFKIIRNGES----YTSPDVNFWGVTFAAD-DRTFYATLA 218

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEAMDIYSV 287
            +    +   D R +     +      +  P  S +G R         + KD    +Y +
Sbjct: 219 TKGKTYLVRGDLRENT----VTTIHENVECPSLSPDGTRIAYKKRVPGLPKDAPWRLYVL 274

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQ 343
           +L++     L  T  ++  A +      IV+    +    LY   +NG+    RI+ 
Sbjct: 275 NLRTMKETPLAETRSVDDQAVW-KTPETIVYALPGDYGADLYETPANGTGHPHRITT 330



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 68/217 (31%), Gaps = 37/217 (17%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDE--------AMDIYSVDLQSNATE------RLTNT 300
           +   +    R S  G  A  +             +     VD+++          ++   
Sbjct: 131 DVPGIPSRARVSPTGHFAAWTAFVGGDSYAGTNFSTRAAIVDVRTGELTPTLESFKIIRN 190

Query: 301 LFINISA-------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                S        +++ D          +GK  L       +    I ++ E     P 
Sbjct: 191 GESYTSPDVNFWGVTFAADDRTFYATLATKGKTYLVRGDLRENTVTTIHENVE----CPS 246

Query: 354 WSPQGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSN-LQAPTW-SPSGRSLIF 406
            SP G  IA+ K          + + V+     +E  L E  +      W +P   ++++
Sbjct: 247 LSPDGTRIAYKKRVPGLPKDAPWRLYVLNLRTMKETPLAETRSVDDQAVWKTP--ETIVY 304

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           +    GD G+ LY    NG       T A  S P ++
Sbjct: 305 AL--PGDYGADLYETPANGTGHPHRITTAAVS-PAYI 338


>gi|256841680|ref|ZP_05547186.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256736574|gb|EEU49902.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 827

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 46/339 (13%), Positives = 100/339 (29%), Gaps = 72/339 (21%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF----------------SSPASWR 152
             +VT  V  E        + L DV D K+I                         +S+ 
Sbjct: 168 DAVVTATVNPEK------RYTLSDVFDGKRIQSASLSPNGKFIIISYQETYPGGKQSSFT 221

Query: 153 KIAHTIS-DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           +I    +   + ++    +    S + + +   + G    +L     D  + +    S  
Sbjct: 222 QILDKATGSVLVENGQSLRWMPKSNLAYYTRKGMKGTELVTL-----DPTSKKENILSSQ 276

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------------------- 251
                  F P +  + ++  +     R  + +  +    +                    
Sbjct: 277 LPEGSFSFGPTEDYLLFSIREKGPQERKEIQEILVPDDRQPGWRNRMFIHKYDLRTGLFQ 336

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLTNTLFIN 304
           R+    +       S +G   L S ++            IY +DL++   + L       
Sbjct: 337 RLTYGHTSTYINDVSQDGHYLLFSRREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFV 396

Query: 305 ISASYSPDSSQI-------VF----------ESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             A +SPD++Q+        F          ++      QL++        K +++D + 
Sbjct: 397 SRAVFSPDATQLLVDASGEAFDGIGLKIKEGQTSNTSDGQLFLYNIADKSIKPLTKDFDP 456

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           S     W+     I  T    ++  I  +     + + L
Sbjct: 457 SVDSYEWNALDKQIYITAKDKDRVRIYSLNPSNGKIKQL 495



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 44/276 (15%), Positives = 86/276 (31%), Gaps = 53/276 (19%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I+YL+ S  +   +  F+P  +K A  T       R  L D    +  +          +
Sbjct: 147 IKYLSESHKENALKASFNP--EKDAVVTATVNPEKRYTLSDVFDGKRIQ----------S 194

Query: 263 PRFSSNGKRALISVQKD-----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              S NGK  +IS Q+      ++     +D  + +   + N   +     + P S+   
Sbjct: 195 ASLSPNGKFIIISYQETYPGGKQSSFTQILDKATGSV-LVENGQSL----RWMPKSNLAY 249

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-------- 369
           +        +L  +      +  +S       F   + P  D + F+             
Sbjct: 250 YTRKGMKGTELVTLDPTSKKENILSSQLPEGSF--SFGPTEDYLLFSIREKGPQERKEIQ 307

Query: 370 --------------KFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG-- 412
                         +  I          + L    ++      S  G  L+FSR++    
Sbjct: 308 EILVPDDRQPGWRNRMFIHKYDLRTGLFQRLTYGHTSTYINDVSQDGHYLLFSRREPNLT 367

Query: 413 ---DTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
               + + +Y +DL     +TLI    + S   +  
Sbjct: 368 ERPFSRTYIYKMDLRTMHVDTLIKGEKFVSRAVFSP 403


>gi|225712676|gb|ACO12184.1| WD repeat-containing protein 82 [Lepeophtheirus salmonis]
 gi|290462195|gb|ADD24145.1| WD repeat-containing protein 82 [Lepeophtheirus salmonis]
          Length = 319

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 79/199 (39%), Gaps = 30/199 (15%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ES +SG +  ++ + D    N + L      +   P  S + + + +A     + +++
Sbjct: 122 VDESFISGSLDKTIRLWDLRSNNCQGLMH----LAGRPVASFDPEGLIFAAGISSESVKL 177

Query: 240 YLMDTRIDRAPKRIGNFRSMILAP---------RFSSNGKRALISVQKDEAMDIYSVDLQ 290
           Y + +         G F S    P         +FS +GK  LIS        I  +D  
Sbjct: 178 YDLRSFDK------GPFSSFKFPPEKEMEWTGLKFSPDGKTILISTN---GSLIKLIDAF 228

Query: 291 SNATER-LT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           S  T +  T   NT  I + AS+SPD SQ V     +G+  ++  ++ G+    ++ D +
Sbjct: 229 SGQTLQTFTGHLNTKGIPLEASFSPD-SQFVISGSTDGRVHIWNAET-GTKVCVLNGDHD 286

Query: 347 ASYFDPVWSPQGDLIAFTK 365
                  ++P    +    
Sbjct: 287 GPVSCVQFNP--KYMMMAS 303


>gi|195438455|ref|XP_002067152.1| GK24839 [Drosophila willistoni]
 gi|194163237|gb|EDW78138.1| GK24839 [Drosophila willistoni]
          Length = 317

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 16/184 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +SG +  +L + D    N + L      +   P  + + + + +A   + + +++
Sbjct: 120 VEDTFLSGSLDKTLRLWDLRSPNCQGLMH----LSGRPIAAYDPEGLIFAAGVNSESIKL 175

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
           Y +   D       K            +FS +GK  LIS        I  VD       +
Sbjct: 176 YDLRSFDKGPFVTFKLNQEKECDWTGLKFSRDGKTILISTN---GSVIRLVDAFHGTPLQ 232

Query: 296 RLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             T   N   I I AS+SPD SQ +F    +G+  ++   + G+    ++ D        
Sbjct: 233 TFTGYPNNKGIAIEASFSPD-SQFIFSGSTDGRVHIWNADT-GNKVSVLNGDHPGPVQCV 290

Query: 353 VWSP 356
            ++P
Sbjct: 291 QFNP 294


>gi|223937180|ref|ZP_03629087.1| WD-40 repeat protein [bacterium Ellin514]
 gi|223894202|gb|EEF60656.1| WD-40 repeat protein [bacterium Ellin514]
          Length = 383

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 59/194 (30%), Gaps = 19/194 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + VA           V + +         +    S I    FS NG     +  
Sbjct: 39  AVSPDGRLVA----TAGTNAPVQVWNATNGSLAHSLSGPTSWIGQLAFSPNGGYLA-AGS 93

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIVFESDREGKEQLYVMQSNG 335
            D  + ++    ++     ++  +        ++SPDSS I   S       + +     
Sbjct: 94  GDRTVTLW----ETTNWTLVSGFVTHQQGPAIAFSPDSSMIALSSQ----ANVELRSLPK 145

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQE---RLLVEDSN 391
               R             +SP G  +A +  F G+   + +               +  +
Sbjct: 146 FGLIRSWTAGTNEIPAVAFSPDGTRLASSADFRGQDTRLKMWDVATGNLLWAVPTAQTYS 205

Query: 392 LQAPTWSPSGRSLI 405
           + +  +SP G  + 
Sbjct: 206 IGSLAFSPDGTRIA 219



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 69/207 (33%), Gaps = 41/207 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A ++        V L         +      + I A  FS +G R   S  
Sbjct: 122 AFSPDSSMIALSSQ-----ANVELRSLPKFGLIRSWTAGTNEIPAVAFSPDGTRLASSAD 176

Query: 278 KDEAMDIYSV-DLQSNAT--ERLTNTLFINISASYSPDSSQIV-------FESDREGKEQ 327
                    + D+ +        T   +   S ++SPD ++I        F S      Q
Sbjct: 177 FRGQDTRLKMWDVATGNLLWAVPTAQTYSIGSLAFSPDGTRIATANSLLNFSS----SVQ 232

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQG--------DLIAFTKFSGEKFAIGVMKKD 379
           L+ + ++G+    + +    +     +SP G        +L+  +  SG   A       
Sbjct: 233 LFRV-TDGA----LLRTYPENANSVAFSPDGLTTLSAGTNLVLRSVQSGALIASFTDGIS 287

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIF 406
            ++ R +          ++P G +  +
Sbjct: 288 ANESRAIT---------FAPDGSAFYY 305



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 50/160 (31%), Gaps = 11/160 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G+    +          + +   +    L+         ++SP+   +       
Sbjct: 39  AVSPDGRLVATAGTNAPVQVWNATN--GSLAHSLSGPTSWIGQLAFSPNGGYLA-----A 91

Query: 324 GKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           G     V     ++   +S            +SP   +IA +  +     +  + K G  
Sbjct: 92  GSGDRTVTLWETTNWTLVSGFVTHQQGPAIAFSPDSSMIALSSQA--NVELRSLPKFGLI 149

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSI 421
                  + + A  +SP G  L  S   +  DT  K++ +
Sbjct: 150 RSWTAGTNEIPAVAFSPDGTRLASSADFRGQDTRLKMWDV 189


>gi|111223551|ref|YP_714345.1| WD-40 repeat-containing protein [Frankia alni ACN14a]
 gi|111151083|emb|CAJ62792.1| Putative WD-40 repeat protein [Frankia alni ACN14a]
          Length = 1567

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 81/227 (35%), Gaps = 26/227 (11%)

Query: 222  NQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIGN---FRSMILAPRFSSNGKRALIS 275
            N + +A A++D         VYL D      P         + ++ A  F+ +G   + +
Sbjct: 913  NGRLMASASWDQGAHGTAGLVYLWDVSDPARPVLRATMREHQGLLSALTFTPDGIYLIGA 972

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISASYS-----PDSSQIVFESDREGKEQLY- 329
             + D    ++ V      + R T T  I + +  +      D   +   +D +G+  ++ 
Sbjct: 973  GRDDGRTVVWDV----ANSRRPTVTAAITVDSHVNDIALAADGHTLALAAD-DGRASVWD 1027

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                     + ++           +   GDL+A          I V    G++ RLL   
Sbjct: 1028 FTDRAHPHLRAVTPPLPEEVRAVAFLDDGDLLATGSREAG---IAVWSLFGTKPRLLTRT 1084

Query: 390  SNLQAPT-----WSPSGRSLIFSR-KKDGDTGSKLYSIDLNGRNETL 430
            S+  + +      SP  R+L  +   +   T S L++I   G    L
Sbjct: 1085 SDPASGSVAQIAISPDRRTLATASEDRTAATSSVLFNISPGGDLRKL 1131



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 50/290 (17%), Positives = 92/290 (31%), Gaps = 37/290 (12%)

Query: 80   NLISQDSFKQKITNPDSIPRFQDWN-SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
            +L+      ++ T  D          S   ++LVT  + +     L     LWD+     
Sbjct: 1251 DLVDPRRPSRRGTVADPADNIAAMAISQSGRLLVTSSIGRASGLVL-----LWDI----- 1300

Query: 139  IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
                   +     R+   T  D I        G+       V     +G     L  +  
Sbjct: 1301 ------TNPARPVRRATLTGLDHIESVSIAPSGN-------VMMLGAAGANATELWEVT- 1346

Query: 199  DGANIRYLTPSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D A  R L+               SP+ + +A    D   +  +   D R        G 
Sbjct: 1347 DPARPRRLSRLPGVSQKGGGGLALSPDGRTLAAPKDDGIALWDI--GDPRRPVLRSIAGG 1404

Query: 256  FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSPD 312
            +   + A  FS +G   + S        I+ V   ++   R T   N   +  S ++ PD
Sbjct: 1405 YTEWVTALAFSPDGHSLV-SGDSGGVAIIWEVADPAHPVRRATLAVNQSGL-TSVAFMPD 1462

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLI 361
            S  +V  S  +G   L+ +       +R +     +++   + +  G  +
Sbjct: 1463 SKTLV-TSGYDGDTVLWDVSDLSDPARRSTLVTGNSAWTTSLIAANGRFV 1511



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 68/212 (32%), Gaps = 12/212 (5%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISV 276
              S + + +  ++      L +    T   R  +R        I +   + +G   ++  
Sbjct: 1275 AISQSGRLLVTSSIGRASGLVLLWDITNPARPVRRATLTGLDHIESVSIAPSGNVMMLGA 1334

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFIN----ISASYSPDSSQIVFESDREGKEQLYVMQ 332
                A +++ V        RL+    ++       + SPD   +    D +G     +  
Sbjct: 1335 AGANATELWEV-TDPARPRRLSRLPGVSQKGGGGLALSPDGRTLAAPKD-DGIALWDIGD 1392

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDS 390
                  + I+           +SP G  +      G      V        R  L V  S
Sbjct: 1393 PRRPVLRSIAGGYTEWVTALAFSPDGHSLVSGDSGGVAIIWEVADPAHPVRRATLAVNQS 1452

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             L +  + P  ++L+ +   DGDT   L+ + 
Sbjct: 1453 GLTSVAFMPDSKTLV-TSGYDGDT--VLWDVS 1481



 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 38/288 (13%), Positives = 90/288 (31%), Gaps = 10/288 (3%)

Query: 152  RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
             ++    SD    S+       + R L  +    +    + L  +   G   +  T + +
Sbjct: 1078 PRLLTRTSDPASGSVAQIAISPDRRTLATASEDRTAATSSVLFNISPGGDLRKLGTVASN 1137

Query: 212  QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              +    F+P+ + +   +  D+ I    + D         +      I    FS++G+ 
Sbjct: 1138 AAIAAVAFTPDSRTLVTTSPSDQRITTWDITDRGRPVRGPELSGHTGEIGELAFSADGRM 1197

Query: 272  ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
               S   D ++ ++SVD        L + +    + +       I   +D        ++
Sbjct: 1198 LA-SGGDDGSVLLWSVDRA--RPTPLVDLVGGGGAPA-LGGEDPIAAIADGPTATLWDLV 1253

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVED 389
                  ++    D   +      S  G L+  +    +     +  +       R     
Sbjct: 1254 DPRRPSRRGTVADPADNIAAMAISQSGRLLVTSSIGRASGLVLLWDITNPARPVRRATLT 1313

Query: 390  SNL--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                 ++ + +PSG  ++      G   ++L+ +    R   L   P 
Sbjct: 1314 GLDHIESVSIAPSGNVMMLGA--AGANATELWEVTDPARPRRLSRLPG 1359


>gi|319900661|ref|YP_004160389.1| prolyl tripeptidyl peptidase [Bacteroides helcogenes P 36-108]
 gi|319415692|gb|ADV42803.1| prolyl tripeptidyl peptidase [Bacteroides helcogenes P 36-108]
          Length = 739

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 76/232 (32%), Gaps = 49/232 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--------------- 263
           +SP    +A+   D+  + +  L+D         +  +    +                 
Sbjct: 209 WSPEGHLLAFYRMDESMVTQYPLVDITARTGEVNLIRYPMAGMTSHKVYVGIYNPQSGKT 268

Query: 264 ----------------RFSSNGKRALIS-VQKDEA-MDIYSVDLQSNATERLTNTLFINI 305
                            ++ +GK   ++ + +D+    +   + ++     LT  ++   
Sbjct: 269 VYLNTGDPTDRYFTNISWAPDGKSLYLTELNRDQNHAKLCQYNAENGE---LTGEIYEEN 325

Query: 306 SASY----SP------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
              Y    SP      D ++ + +S R+G   LY+        K+++Q          ++
Sbjct: 326 HPKYVEPQSPIIFLPWDDTKFICQSQRDGYNHLYLADIKNG-MKQLTQGDWLVQEVLGFN 384

Query: 356 PQGD--LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +    +IA TK S  +  I  +  +  +   L     +     S SG  LI
Sbjct: 385 EKKKEIIIAATKESPLQSNIYKVSINSGKITPLDNGKGVHHAILSASGNYLI 436


>gi|307110106|gb|EFN58343.1| hypothetical protein CHLNCDRAFT_142394 [Chlorella variabilis]
          Length = 388

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/208 (12%), Positives = 72/208 (34%), Gaps = 14/208 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P+++ ++    ++++     L     D +        S + +  +S      + +   D
Sbjct: 32  APDEENMSDGEEEEDEEEGDGLDAADEDDSIHTFTGHTSGVYSVAWSPRQADLVATGGAD 91

Query: 280 EAMDIYSV-----DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +   I+ V     +    A   L        S ++S D + +      +G  ++ V +  
Sbjct: 92  DRAYIWRVGQEAFEQTGGAVLELGGHTDTVASMAFSADGASLA-TGGLDG--RVKVWEVA 148

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNL 392
                +  +    +     W P+G ++         F   +          +      ++
Sbjct: 149 SGRCTQTLEGPGDAVEWVRWHPKGGVVLV---GAADFTAWMWLAQTGACMQVFSGHSGSV 205

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              +++P G+ ++ +   +GD   K++S
Sbjct: 206 VCGSFTPDGKWVV-TGGGEGDASLKVWS 232



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/190 (11%), Positives = 58/190 (30%), Gaps = 13/190 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR----IDRAPKRIGNFRSMI 260
           +        ++   +SP Q  +  AT   +D   ++ +          A   +G     +
Sbjct: 63  HTFTGHTSGVYSVAWSPRQADLV-ATGGADDRAYIWRVGQEAFEQTGGAVLELGGHTDTV 121

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE 319
            +  FS++G     +   D  + ++ V   S    +        +    + P    ++  
Sbjct: 122 ASMAFSADGASLA-TGGLDGRVKVWEV--ASGRCTQTLEGPGDAVEWVRWHPKGGVVLVG 178

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +        ++  +      ++      S     ++P G  +  T       ++ V    
Sbjct: 179 A---ADFTAWMWLAQTGACMQVFSGHSGSVVCGSFTPDGKWVV-TGGGEGDASLKVWSPK 234

Query: 380 GSQERLLVED 389
             +  L V+ 
Sbjct: 235 TGECALTVQG 244


>gi|290956262|ref|YP_003487444.1| acyl-peptide hydrolase [Streptomyces scabiei 87.22]
 gi|260645788|emb|CBG68879.1| putative acyl-peptide hydrolase [Streptomyces scabiei 87.22]
          Length = 656

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 69/235 (29%), Gaps = 30/235 (12%)

Query: 190 KNSLCVMDRDG------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV---- 239
           +  +  +  DG        +R LT    + +  PR SP+ ++ A+  +D   +       
Sbjct: 154 RRVVAAVPLDGSAAEDRQAVRELTDDTRRFVSGPRLSPDGRRAAWLAWDHPGMPWDGTSL 213

Query: 240 ----YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                  D R+       G     +    ++++G   + S       ++Y +D  S    
Sbjct: 214 LVAEVTGDGRLGEPRTLAGGPEESVAQAEWAADGT-LIHSSDTTGYWNLYRLDPDSGDRT 272

Query: 296 RLTNTLFINISASY---------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            L           +           D   +       G   L ++  +      +     
Sbjct: 273 PLCAREEEFGGPLWKIGWRWFALMDDG--LAAVVHGRGATALGILDLDTGQI--VDAAGP 328

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVEDSNLQA-PTWSP 399
            + F P  +  G  +     S    + +  +       R++    +    PT+ P
Sbjct: 329 WTEFAPSLAVHGSRVIGIGASPRSAYEVVELDAATGDARVIGAAHDDPVDPTYYP 383



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 50/347 (14%), Positives = 111/347 (31%), Gaps = 55/347 (15%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS----LCVMDRDGAN 202
           +    R +    +D + +S+     +  SR++       +G++++     + V   D   
Sbjct: 43  AEGGRRTLVRRTADGLEESVLPAPWNVRSRVMEYGGLPWAGVMRDDGPLVVFVNHAD-QR 101

Query: 203 IRYLTPSRDQILFEP--------RFS-----PNQQKVA-----YATYDDEDILRVYLMDT 244
           +    P  + +   P        R++     P + +V      +      D+ RV     
Sbjct: 102 LYRFAPGGEPVPLTPVSPVGGGLRWADPRPHPERDEVWCVLEEFTGDGPTDVRRVVAAVP 161

Query: 245 RIDRA-------PKRIGNFRSMILAPRFSSNGKRALI-SVQKDEAMD----IYSVDLQS- 291
               A        +   + R  +  PR S +G+RA   +            +   ++   
Sbjct: 162 LDGSAAEDRQAVRELTDDTRRFVSGPRLSPDGRRAAWLAWDHPGMPWDGTSLLVAEVTGD 221

Query: 292 ---NATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                   L      ++  A ++ D + ++  SD  G   LY +  +  D+  +   +E 
Sbjct: 222 GRLGEPRTLAGGPEESVAQAEWAADGT-LIHSSDTTGYWNLYRLDPDSGDRTPL-CAREE 279

Query: 348 SYFDPVW---------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            +  P+W            G  +A         A+G++  D  Q           AP+ +
Sbjct: 280 EFGGPLWKIGWRWFALMDDG--LAAVVHGRGATALGILDLDTGQIVDAAGPWTEFAPSLA 337

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS-DPQWVG 444
             G  +I        +  ++  +D    +  +I        DP +  
Sbjct: 338 VHGSRVI-GIGASPRSAYEVVELDAATGDARVIGAAHDDPVDPTYYP 383


>gi|169631798|ref|YP_001705447.1| peptidase [Mycobacterium abscessus ATCC 19977]
 gi|169243765|emb|CAM64793.1| Probable peptidase [Mycobacterium abscessus]
          Length = 622

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 5/88 (5%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
             SP G +IA+      +  + V     ++ R +  D   ++    W    R L++ +  
Sbjct: 22  SISPDGTMIAYLAPRKNRLNVWVQGIGSTEARCVTHDETRSVTGFFWVDDPRWLLYVQDS 81

Query: 411 DGDTGSKLYSIDLNGRNET---LINTPA 435
            GD    LY +DL+  + T   L   P 
Sbjct: 82  GGDENWHLYRVDLSTPDATAVDLTPFPG 109



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            SAS SPD + I + + R+ +  ++V     ++ + ++ D+  S     W      + + 
Sbjct: 19  TSASISPDGTMIAYLAPRKNRLNVWVQGIGSTEARCVTHDETRSVTGFFWVDDPRWLLYV 78

Query: 365 KFSGE--KFAIGVMKKDG 380
           + SG    + +  +    
Sbjct: 79  QDSGGDENWHLYRVDLST 96



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 28/211 (13%), Positives = 62/211 (29%), Gaps = 27/211 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQ 315
             +  +   S +G        +   ++++   + S     +T+    +     +  D   
Sbjct: 15  PPVRTSASISPDGTMIAYLAPRKNRLNVWVQGIGSTEARCVTHDETRSVTGFFWVDDPRW 74

Query: 316 IVFESDREG--KEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGD----LIAFTKFSG 368
           +++  D  G     LY +  +  D   +       +    +  P G      I       
Sbjct: 75  LLYVQDSGGDENWHLYRVDLSTPDATAVDLTPFPGARLLGLERPYGRSGKVYIQLNHRRI 134

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWS-PS----------GRSLIFSRKKDGDTGSK 417
           ++  +  +     +  +L E+       +  P+          G  + FSR + G     
Sbjct: 135 DQIDLYELDIASGELTMLAENPGGVMAWFCGPNHEVFAQSLTPGGDIEFSRYESGALRP- 193

Query: 418 LYSIDLN----GRNETLINTPAYASDPQWVG 444
           L   D      G N T +          W+G
Sbjct: 194 LCVYDGADYPVGMNPTQMTPDG---SGMWLG 221



 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 82/240 (34%), Gaps = 30/240 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-- 275
             SP+   +AY     ++ L V++       A     +    +    +  + +  L    
Sbjct: 22  SISPDGTMIAYLA-PRKNRLNVWVQGIGSTEARCVTHDETRSVTGFFWVDDPRWLLYVQD 80

Query: 276 VQKDEAMDIYSVDLQSNATER--LTNTLF---INISASYSPDSSQIVFESDREGKE-QLY 329
              DE   +Y VDL +       LT       + +   Y       +  + R   +  LY
Sbjct: 81  SGGDENWHLYRVDLSTPDATAVDLTPFPGARLLGLERPYGRSGKVYIQLNHRRIDQIDLY 140

Query: 330 VMQSNGSDQKRISQ----------DKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKK 378
            +     +   +++                F    +P GD I F+++       + V   
Sbjct: 141 ELDIASGELTMLAENPGGVMAWFCGPNHEVFAQSLTPGGD-IEFSRYESGALRPLCVY-- 197

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYA 437
           DG+   + +  + +     +P G  +     +D D  ++L  +DL  G   T+ + PAY 
Sbjct: 198 DGADYPVGMNPTQM-----TPDGSGMWLGSSRDTDR-TRLVRLDLATGAESTIDSHPAYD 251


>gi|301785584|ref|XP_002928205.1| PREDICTED: WD repeat-containing protein 17-like isoform 2
           [Ailuropoda melanoleuca]
          Length = 1283

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 70/197 (35%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +       +P  + +++   ++P +   +A AT  +      ++ D 
Sbjct: 387 TASFDGTIKVWDINTLTAVDTSPGNEGVIYSLSWAPGDLNCIAGATSRNG----AFIWDV 442

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           R  +  +R   + ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 443 RKGKMVQRFNEHGKNGIFCVAWSHKDSKRIA-TCSGDGFCIIRTID--GKVLHKY-KHPA 498

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + + 
Sbjct: 499 AVFGCDWSQNNKDMIATGCEDKNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLSEGVL 558

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 559 CSGSDDGSVRIWDYTQD 575


>gi|301785582|ref|XP_002928204.1| PREDICTED: WD repeat-containing protein 17-like isoform 1
           [Ailuropoda melanoleuca]
          Length = 1322

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 70/197 (35%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +       +P  + +++   ++P +   +A AT  +      ++ D 
Sbjct: 411 TASFDGTIKVWDINTLTAVDTSPGNEGVIYSLSWAPGDLNCIAGATSRNG----AFIWDV 466

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           R  +  +R   + ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 467 RKGKMVQRFNEHGKNGIFCVAWSHKDSKRIA-TCSGDGFCIIRTID--GKVLHKY-KHPA 522

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + + 
Sbjct: 523 AVFGCDWSQNNKDMIATGCEDKNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLSEGVL 582

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 583 CSGSDDGSVRIWDYTQD 599


>gi|281340630|gb|EFB16214.1| hypothetical protein PANDA_018123 [Ailuropoda melanoleuca]
          Length = 1301

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 70/197 (35%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +       +P  + +++   ++P +   +A AT  +      ++ D 
Sbjct: 390 TASFDGTIKVWDINTLTAVDTSPGNEGVIYSLSWAPGDLNCIAGATSRNG----AFIWDV 445

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           R  +  +R   + ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 446 RKGKMVQRFNEHGKNGIFCVAWSHKDSKRIA-TCSGDGFCIIRTID--GKVLHKY-KHPA 501

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + + 
Sbjct: 502 AVFGCDWSQNNKDMIATGCEDKNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLSEGVL 561

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 562 CSGSDDGSVRIWDYTQD 578


>gi|195385719|ref|XP_002051552.1| GJ16174 [Drosophila virilis]
 gi|194148009|gb|EDW63707.1| GJ16174 [Drosophila virilis]
          Length = 317

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 16/184 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +SG +  +L + D    N + L      +   P  + + + + +A   + + +++
Sbjct: 120 VEDTFLSGSLDKTLRLWDLRSPNCQGLMH----LSGRPIAAYDPEGLIFAAGVNSESIKL 175

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
           Y +   D       K            +FS +GK  LIS        I  VD       +
Sbjct: 176 YDLRSFDKGPFVTFKLNQEKECDWTGLKFSRDGKTILISTN---GSVIRLVDAFHGTPLQ 232

Query: 296 RLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             T   N   I I AS+SPD SQ +F    +G+  ++   + G+    ++ D        
Sbjct: 233 TFTGYPNNKGIAIEASFSPD-SQFIFSGSTDGRVHIWNADT-GNKVSVLNGDHPGPVQCV 290

Query: 353 VWSP 356
            ++P
Sbjct: 291 QFNP 294


>gi|195115677|ref|XP_002002383.1| GI17354 [Drosophila mojavensis]
 gi|193912958|gb|EDW11825.1| GI17354 [Drosophila mojavensis]
          Length = 317

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 16/184 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +SG +  +L + D    N + L      +   P  + + + + +A   + + +++
Sbjct: 120 VEDTFLSGSLDKTLRLWDLRSPNCQGLMH----LSGRPIAAYDPEGLIFAAGVNSESIKL 175

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
           Y +   D       K            +FS +GK  LIS        I  VD       +
Sbjct: 176 YDLRSFDKGPFVTFKLNQEKECDWTGLKFSRDGKTILISTN---GSVIRLVDAFHGTPLQ 232

Query: 296 RLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             T   N   I I AS+SPD SQ +F    +G+  ++   + G+    ++ D        
Sbjct: 233 TFTGYPNNKGIAIEASFSPD-SQFIFSGSTDGRVHIWNADT-GNKVSVLNGDHPGPVQCV 290

Query: 353 VWSP 356
            ++P
Sbjct: 291 QFNP 294


>gi|321473932|gb|EFX84898.1| hypothetical protein DAPPUDRAFT_300799 [Daphnia pulex]
          Length = 889

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 81/268 (30%), Gaps = 50/268 (18%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL--------MDTRIDRAPKRIGNFR 257
                 + +F     P+  K A     D+    V               D  PK +    
Sbjct: 8   WVTHDGKPIFSIDIHPDGSKFATGGQGDDSGRVVIWNVAPIVKEQAEEDDNVPKLLCQMD 67

Query: 258 SM---ILAPRFSSNGKRALISVQKDEAMDIYSVDL-------QSNATER---------LT 298
           +    +   R+S++G+    S   D+ + I+ +                         L 
Sbjct: 68  NHLACVNCVRWSNSGQYLA-SGGDDKLVMIWQLTRYAGSTIFGGGGKTNVEHWRCVSTLR 126

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                 +   +SPD   +   S  +   +++ M  N  +   + +          W P G
Sbjct: 127 GHSGDVLDLGWSPDDQYLA-SSSVDNTVRIWNM-LNMPESIAVLKGHTGLVKGIAWDPIG 184

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKD 411
             +A ++   +   I     D  QE ++ E       T       WSP G+ L+ +    
Sbjct: 185 KYVA-SQSDDKTVRIWK-TADWKQETVVTEPFEECGGTTHVLRLNWSPDGQYLVSA---- 238

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASD 439
                  ++++  G    +I    + +D
Sbjct: 239 -------HAMNGGGPTAQIIEREGWKTD 259



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 19/143 (13%), Positives = 45/143 (31%), Gaps = 14/143 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                        + +  +SP+ Q +A ++ D  + +R++ M   +  +   +     ++
Sbjct: 119 WRCVSTLRGHSGDVLDLGWSPDDQYLASSSVD--NTVRIWNM-LNMPESIAVLKGHTGLV 175

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-------YSPDS 313
               +   GK      Q D+                +T   F     +       +SPD 
Sbjct: 176 KGIAWDPIGKYVA--SQSDDKTVRIWKTADWKQETVVT-EPFEECGGTTHVLRLNWSPDG 232

Query: 314 SQIV-FESDREGKEQLYVMQSNG 335
             +V   +   G     +++  G
Sbjct: 233 QYLVSAHAMNGGGPTAQIIEREG 255



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 26/216 (12%), Positives = 64/216 (29%), Gaps = 39/216 (18%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL----------QSNATE---R 296
           P  + +    I +     +G +     Q D++  +   ++            N  +   +
Sbjct: 6   PAWVTHDGKPIFSIDIHPDGSKFATGGQGDDSGRVVIWNVAPIVKEQAEEDDNVPKLLCQ 65

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS----------NGSDQKRI----- 341
           + N L       +S     +       G ++L ++             G  +  +     
Sbjct: 66  MDNHLACVNCVRWSNSGQYLA----SGGDDKLVMIWQLTRYAGSTIFGGGGKTNVEHWRC 121

Query: 342 ---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
               +       D  WSP    +A +          ++    S   L      ++   W 
Sbjct: 122 VSTLRGHSGDVLDLGWSPDDQYLASSSVDNTVRIWNMLNMPESIAVLKGHTGLVKGIAWD 181

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           P G+ +     +  D   +++    + + ET++  P
Sbjct: 182 PIGKYVA---SQSDDKTVRIWKT-ADWKQETVVTEP 213


>gi|218782333|ref|YP_002433651.1| hypothetical protein Dalk_4504 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763717|gb|ACL06183.1| YD repeat protein [Desulfatibacillum alkenivorans AK-01]
          Length = 1448

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 65/226 (28%), Gaps = 18/226 (7%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D  G   RY   + D I       P+ +   +        L   + D    R   +   
Sbjct: 724 TDATGYTCRYAYNNLDNITSITY--PDDRSTTFTYSSSRPHLVSGVTDPAGRRTEFQYNA 781

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            R +  A     +G +   S  KD  +   +  L        T     N+S    PD   
Sbjct: 782 LRQITRATY--PDGSQIAYSYHKDGRLAEITDPL--GRKTSYTYDRDGNLSQKTYPDGRS 837

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
               S      +L             + D   +    V+S     + FT  +  +    V
Sbjct: 838 ---VSLEYSGGRLKKFTDARGIATNYTYDLNGNLLTIVYSDDTPSVVFTYDAYNRP---V 891

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRS----LIFSRKKDGDTGSK 417
             +DG   R L  D+  +  +    G      L FS    G   S+
Sbjct: 892 TVQDGLGSRTLTYDAASRPLSI--DGPWENDTLQFSYDLKGRKTSQ 935


>gi|163788921|ref|ZP_02183366.1| outer membrane protein 3a [Flavobacteriales bacterium ALC-1]
 gi|159876158|gb|EDP70217.1| outer membrane protein 3a [Flavobacteriales bacterium ALC-1]
          Length = 301

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 57/173 (32%), Gaps = 34/173 (19%)

Query: 308 SYSPDSSQIVFESDREGKE----------QLYVMQSN---GSDQKRISQ----DKEASYF 350
           +YS D   + F ++  GK            L + ++    G      +     D   +Y 
Sbjct: 103 TYSKDGKYMYFTANHTGKGENKLHGKNTFNLLIKRAEYVEGKGWINFTTLPFCDPNFNYA 162

Query: 351 DPVWSPQGDLIAFTKF---SGEKFAIGVMKKDG----SQERLLVED----SNLQAPTWSP 399
            P  SP G  + F      +  K  +  +         +   L E          P  S 
Sbjct: 163 HPALSPDGSTLYFISTIKGTKGKSDLYKVSVSNHETYGEVTKLSETINSSRTEIYPFISA 222

Query: 400 SGRSLIFSR-KKDGDTGSKLYSIDL--NGRNETLI--NTPAYASDPQWVGFMD 447
             + L F+  ++ G  G  +Y  DL  N  N+  +  + P  +    +  F++
Sbjct: 223 DNK-LYFTSDRRGGKGGLDIYVYDLKSNDNNQVPVSLDAPINSRGDDFSFFLN 274



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 63/215 (29%), Gaps = 38/215 (17%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI-----YSVDL-------- 289
           +    +  KR     S +    +S +GK    +       +       + +L        
Sbjct: 82  EIENTKLVKRKEVGMSNMSVSTYSKDGKYMYFTANHTGKGENKLHGKNTFNLLIKRAEYV 141

Query: 290 QSNATERLTNTLFIN-----ISASYSPDSSQIVFESD---REGKEQLYVMQSNG----SD 337
           +       T   F +        + SPD S + F S     +GK  LY +  +      +
Sbjct: 142 EGKGWINFTTLPFCDPNFNYAHPALSPDGSTLYFISTIKGTKGKSDLYKVSVSNHETYGE 201

Query: 338 QKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLL------- 386
             ++  + +   +   P  S    L   +   G K    I V     +    +       
Sbjct: 202 VTKLSETINSSRTEIYPFISADNKLYFTSDRRGGKGGLDIYVYDLKSNDNNQVPVSLDAP 261

Query: 387 VEDSNLQAPTWSPSGRSLIF--SRKKDGDTGSKLY 419
           +         +     +  +  SR+  G+ G  LY
Sbjct: 262 INSRGDDFSFFLNDDLTTGYLSSRRSKGEGGDDLY 296



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 49/142 (34%), Gaps = 22/142 (15%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIG---NFRSMI 260
             +     P  SP+   + + +         D+ +V + +        ++    N     
Sbjct: 156 DPNFNYAHPALSPDGSTLYFISTIKGTKGKSDLYKVSVSNHETYGEVTKLSETINSSRTE 215

Query: 261 LAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERL-------TNTLFINISASYS 310
           + P  S++  +   +  +      +DIY  DL+SN   ++        N+   + S   +
Sbjct: 216 IYPFISAD-NKLYFTSDRRGGKGGLDIYVYDLKSNDNNQVPVSLDAPINSRGDDFSFFLN 274

Query: 311 PDSSQIVFESDRE---GKEQLY 329
            D +     S R    G + LY
Sbjct: 275 DDLTTGYLSSRRSKGEGGDDLY 296


>gi|146420911|ref|XP_001486408.1| hypothetical protein PGUG_02079 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 786

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 64/180 (35%), Gaps = 16/180 (8%)

Query: 265 FSSNGK--------RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +S +G         R +I         I   D+  +  + +         A+ S D S  
Sbjct: 3   WSPDGSLLVSVGLDRLIIIWSGVTFERIKRYDIHQSMVKGVVFDPANKFFATASDDRSVR 62

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKF-AIG 374
           +F   R+  E  Y  Q      +   +    SYF    WSP G  IA    +     ++ 
Sbjct: 63  IFRYYRKQSENSYEFQMEHVVMEPFRKSPLTSYFRRMTWSPDGQHIAVPNATNGPVTSVA 122

Query: 375 VMKKD--GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           V+ +   G+   L+  ++  +  +++P     +F+     D  S + +I   G  +  + 
Sbjct: 123 VINRGDWGTDLSLIGHEAPCEVCSFAPR----LFNTDVKNDNNSNVSTILATGGQDRTLA 178


>gi|324511793|gb|ADY44902.1| THO complex subunit 3 [Ascaris suum]
          Length = 363

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 48/262 (18%), Positives = 88/262 (33%), Gaps = 33/262 (12%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H  S     +  GE   F SR      + VSG+ +  L     +           D  + 
Sbjct: 17  HQASRMTMAAGWGEGIAFGSR-----HNAVSGMGRVRLYEDAMEHFKRNDRVKVYDMQVP 71

Query: 216 EP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNG 269
            P    ++ +  ++A           + +         K I +            F  + 
Sbjct: 72  RPLTISWNCDGTRLA-----SGAEKSIAVATFDSSYRTKDIFHGFGHNEQVDQVAFHPSN 126

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              L S   D+ + I+ V  Q+    RL  T   N++ ++SP  + +V+     G ++  
Sbjct: 127 THLLASASSDKTIRIWDV-RQTRTHTRLP-TKAQNLNVAWSPCGAYLVY-----GDKEDT 179

Query: 330 VMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +   +G   K +   S  +E + F   + P G  + F    G +  I  M  + S  R++
Sbjct: 180 ISMVDGRSLKILKVESLKEETNEF--AFHPSGKFL-FVALGGGQLGIYKM-PEFSLLRIV 235

Query: 387 ---VEDSNLQAPTWSPSGRSLI 405
                 S       SP G  + 
Sbjct: 236 QAHSAQSTCVCVAVSPDGERIA 257


>gi|312380500|gb|EFR26475.1| hypothetical protein AND_07434 [Anopheles darlingi]
          Length = 377

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 86/213 (40%), Gaps = 24/213 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ + +A A+ D    +++++     +    R     S I +  F ++GK+ L +   
Sbjct: 64  WSPDGRIIASASKD--RSVKIWIPSMLGNCDEFR--GHTSNIRSVEFDASGKKLL-TASD 118

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D+ + ++ V  ++  +  + +T ++   A +SP+   I    D      L +        
Sbjct: 119 DKTVKLWRVSRKNFLSSFVGHTNWVRC-ARFSPNGKLIASCGD---DRTLKLFDPATGQC 174

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-----DSNLQ 393
                D++ + +   W P   L+A       +  I  +       R L++     D  + 
Sbjct: 175 VHTFVDQKGAGYKVAWHPDSSLVA-IALDNCRVKIYDVH-----IRKLIQYYRIFDGPVN 228

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +  + PSG  LI      GD  +K+  + L GR
Sbjct: 229 SLDFHPSGNYLI---TGSGDGVTKIIDL-LEGR 257



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 60/212 (28%), Gaps = 49/212 (23%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + +   R  + A  F+  G R  ++   D +  ++S+  Q     R      +     +S
Sbjct: 8   RHLKGHRGKLTAVSFNPEGSR-FVTSSTDNSAIVWSIHEQVRCM-RFEAHTDVVNDICWS 65

Query: 311 PDSSQIVFES------------------DREGKEQLYVMQSNGSDQKRIS---------- 342
           PD   I   S                   R     +  ++ + S +K ++          
Sbjct: 66  PDGRIIASASKDRSVKIWIPSMLGNCDEFRGHTSNIRSVEFDASGKKLLTASDDKTVKLW 125

Query: 343 ----------QDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-- 389
                          ++     +SP G LIA     G+   + +      Q      D  
Sbjct: 126 RVSRKNFLSSFVGHTNWVRCARFSPNGKLIASC---GDDRTLKLFDPATGQCVHTFVDQK 182

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                  W P    +  +     +   K+Y +
Sbjct: 183 GAGYKVAWHPDSSLVAIALD---NCRVKIYDV 211



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 48/182 (26%), Gaps = 18/182 (9%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N           +   RFSPN + +A       D   + L D    +      + +    
Sbjct: 131 NFLSSFVGHTNWVRCARFSPNGKLIASC----GDDRTLKLFDPATGQCVHTFVDQKGAGY 186

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQIV 317
              +  +     I++     + IY V +      +L     I         + P  + ++
Sbjct: 187 KVAWHPDSSLVAIALDNC-RVKIYDVHI-----RKLIQYYRIFDGPVNSLDFHPSGNYLI 240

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S   G     ++      Q       +       ++  G L   T        +    
Sbjct: 241 TGS---GDGVTKIIDLLEGRQIFTLTGHQGPVTAVKFTKDGQLFV-TGSEDRHVMLWQAN 296

Query: 378 KD 379
            D
Sbjct: 297 LD 298


>gi|121710576|ref|XP_001272904.1| WD repeat protein [Aspergillus clavatus NRRL 1]
 gi|119401054|gb|EAW11478.1| WD repeat protein [Aspergillus clavatus NRRL 1]
          Length = 1351

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 52/313 (16%), Positives = 97/313 (30%), Gaps = 47/313 (15%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                 R+ V    +D+       G ++       R++ H ++ + +       G  +S 
Sbjct: 180 TAVANGRIVV----YDLNR----TGLEYCRFQGHSRQV-HRLAFNPHSPAWLLSGSQDST 230

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I        S      +C     G+  +YL       + + ++SPN   +     D    
Sbjct: 231 IRLWDLRAASTERGVPMC-----GSKEQYL--GNSDAIRDIQWSPNDNSMFATATDSG-- 281

Query: 237 LRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             + L D R   AP  RI        +  +  +GK  +          +   D  S+A  
Sbjct: 282 -AIQLWDYRKASAPIMRITAHDRPCFSVDWHPDGKHVV---SGGMDRQVKVWDFSSSAER 337

Query: 296 R--LTNT--------------LFINISASYSPD-SSQIVFESDREGKEQLYVMQSNGSDQ 338
           R   T                   +    +S    S  V  S  +   ++++        
Sbjct: 338 RQKPTFHFRTPQAVLNVRWRPPSSDREPPFSGHWQSCQVVTSYDKEDPRIHLWDLRRPHV 397

Query: 339 K-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             R     +++  D +W      + +T      F     + D      +V      A  W
Sbjct: 398 PFREFDRHDSNATDLLW--HSKDLLWTVGDSGAFT----QTDIRYAPHVVNQRPTCAVAW 451

Query: 398 SPSGRSLIFSRKK 410
           SP+G  L FS+K+
Sbjct: 452 SPNGEVLAFSQKR 464



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 70/216 (32%), Gaps = 32/216 (14%)

Query: 209 SRDQILFEPRFSPNQQK---------VAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRS 258
              +IL   R SP+            ++Y++ +     L     D    R  K       
Sbjct: 116 GGKEILKTIRVSPDGLSEEANLRNAIISYSSTHHGGSALSARHKDQLTVRDVKWSHGKYD 175

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY----SPDSS 314
            I+A   + NG+  +  + +   ++       S    RL        S ++    S DS+
Sbjct: 176 RIIATAVA-NGRIVVYDLNRTG-LEYCRFQGHSRQVHRLAFNPH---SPAWLLSGSQDST 230

Query: 315 QIVF----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             ++     S   G          GS ++ +      +  D  WSP  + +  T      
Sbjct: 231 IRLWDLRAASTERGVPMC------GSKEQYL--GNSDAIRDIQWSPNDNSMFATATDSGA 282

Query: 371 FAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLI 405
             +   +K  +   R+   D    +  W P G+ ++
Sbjct: 283 IQLWDYRKASAPIMRITAHDRPCFSVDWHPDGKHVV 318


>gi|6978513|ref|NP_036632.1| acylamino-acid-releasing enzyme [Rattus norvegicus]
 gi|113178|sp|P13676|ACPH_RAT RecName: Full=Acylamino-acid-releasing enzyme; Short=AARE; AltName:
           Full=Acyl-peptide hydrolase; Short=APH; AltName:
           Full=Acylaminoacyl-peptidase
 gi|202932|gb|AAA88506.1| acyl-peptide hydrolase [Rattus norvegicus]
 gi|183986301|gb|AAI66605.1| N-acylaminoacyl-peptide hydrolase [Rattus norvegicus]
          Length = 732

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 17/131 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------DDEDILRVYL 241
             +++L  +D  G     L+      +  PR SP+Q ++ Y  Y           L +Y 
Sbjct: 277 NRRSALYYVDLSGGKCELLSDG-SLAICSPRLSPDQCRIVYLQYPCLAPHHQCSQLCLYD 335

Query: 242 MDTRI-----DRAPKRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQS 291
             T++     D  P+++G   S I         +S++ +R +    +    D+++VD Q+
Sbjct: 336 WYTKVTSVVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFAVDTQT 395

Query: 292 NATERLTNTLF 302
            +   LT    
Sbjct: 396 GSITSLTAAGS 406



 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D D  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 224 LCVLDIDSGNISVLEGVPENVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRYCTNRRSALY 283

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNA-- 293
            +D    +  + + +    I +PR S +  R +       A       +   D  +    
Sbjct: 284 YVDLSGGKC-ELLSDGSLAICSPRLSPDQCRIVYLQYPCLAPHHQCSQLCLYDWYTKVTS 342

Query: 294 ------TERLTNT-LFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  +   I  S      +S DS ++VF+S +  ++ L+ + +       ++
Sbjct: 343 VVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFAVDTQTGSITSLT 402

Query: 343 QDKEASYF 350
               A  +
Sbjct: 403 AAGSAGSW 410


>gi|1619608|emb|CAA33040.1| acyl-peptide hydrolase [Rattus norvegicus]
          Length = 729

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 17/131 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------DDEDILRVYL 241
             +++L  +D  G     L+      +  PR SP+Q ++ Y  Y           L +Y 
Sbjct: 277 NRRSALYYVDLSGGKCELLSDG-SLAICSPRLSPDQCRIVYLQYPCLAPHHQCSQLCLYD 335

Query: 242 MDTRI-----DRAPKRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQS 291
             T++     D  P+++G   S I         +S++ +R +    +    D+++VD Q+
Sbjct: 336 WYTKVTSVVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFAVDTQT 395

Query: 292 NATERLTNTLF 302
            +   LT    
Sbjct: 396 GSITSLTAAGS 406



 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 64/188 (34%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D D  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 224 LCVLDIDSGNISVLEGVPENVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRYCTNRRSALY 283

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNA-- 293
            +D    +  + + +    I +PR S +  R +       A       +   D  +    
Sbjct: 284 YVDLSGGKC-ELLSDGSLAICSPRLSPDQCRIVYLQYPCLAPHHQCSQLCLYDWYTKVTS 342

Query: 294 ------TERLTNT-LFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  +   I  S      +S DS ++VF+S +  ++ L+ + +       ++
Sbjct: 343 VVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFAVDTQTGSITSLT 402

Query: 343 QDKEASYF 350
               A  +
Sbjct: 403 AAGSAGSW 410


>gi|2654167|gb|AAB87695.1| activated protein kinase C receptor homolog LACK [Leishmania
           donovani]
          Length = 276

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 12/167 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + D R  +  ++       +LA  FS +  R ++S  +D  + +++V  +       
Sbjct: 88  SIRMWDLRNGQCQRKFLKHTKDVLAVAFSPD-DRLIVSAGRDNVIRVWNVAGECMHEFLR 146

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S  +SP     +  S       + V   NG   +R  +           SP 
Sbjct: 147 DGHEDWVSSICFSPSLEHPIVVSG-SWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPD 205

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPS 400
           G L A     G+  A  +      +   L +  N+++P     +SP+
Sbjct: 206 GSLCA---SGGKDGAALLWDLSTGE--QLFK-INVESPINQIAFSPN 246



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 47/144 (32%), Gaps = 13/144 (9%)

Query: 163 YQSITGEKGDFNSRILFV----SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           ++ +     D+ S I F        VVSG   N++ V + +G             +    
Sbjct: 142 HEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVT 201

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+    A             L D        +I N  S I    FS N     ++ ++
Sbjct: 202 VSPDGSLCA----SGGKDGAALLWDLSTGEQLFKI-NVESPINQIAFSPNRFWMCVATER 256

Query: 279 DEAMDIYSVDLQSNATERLTNTLF 302
                +   DL+S A  + T   +
Sbjct: 257 S----LSVYDLESKAEFQHTGGRY 276


>gi|197098256|ref|NP_001125169.1| POC1 centriolar protein homolog B [Pongo abelii]
 gi|75070861|sp|Q5RD06|POC1B_PONAB RecName: Full=POC1 centriolar protein homolog B; AltName: Full=WD
           repeat-containing protein 51B
 gi|55727190|emb|CAH90351.1| hypothetical protein [Pongo abelii]
          Length = 451

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 56/151 (37%), Gaps = 6/151 (3%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             ++ I +   S NGK+   +   D  + +++    + A   +     +  S  +SP  +
Sbjct: 16  GHKAAITSLDLSPNGKQLA-TASWDTFLMLWNFKPHARAYRYV-GHKDVVTSVQFSPHGN 73

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S R+   +L++    G   +   +   A      +S  G  +A T    +   + 
Sbjct: 74  LLASAS-RDRTVRLWIPDKRGKFSE--FKAHTAPVRSVDFSADGQFLA-TASEDKSIKVW 129

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            M +      L      ++   +SP GR ++
Sbjct: 130 SMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 39/302 (12%), Positives = 94/302 (31%), Gaps = 45/302 (14%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           WD      ++   F     ++R + H   D +        G            + S    
Sbjct: 38  WDTF----LMLWNFKPHARAYRYVGHK--DVVTSVQFSPHG----------NLLASASRD 81

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            ++ +   D         +    +    FS + Q +A A+ D      + +      R  
Sbjct: 82  RTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDK----SIKVWSMYRQRFL 137

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-- 308
             +      +   +FS +G R ++S  +D+ + I+     +   ++  N    ++  +  
Sbjct: 138 YSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIW----DTTN-KQCVNNFSDSVGFANF 191

Query: 309 --YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             ++P  + I         + + V     +   +  Q          + P  + +     
Sbjct: 192 VDFNPSGTCIA---SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSDNYLVTASS 248

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSID 422
            G    + ++     + RL+        P    ++S  G   +F+     DT   L+  +
Sbjct: 249 DGTLKILDLL-----EGRLIYTLQGHTGPVFTVSFSKGGE--LFASG-GADTQVLLWRTN 300

Query: 423 LN 424
            +
Sbjct: 301 FD 302


>gi|260172641|ref|ZP_05759053.1| dipeptidyl peptidase IV [Bacteroides sp. D2]
 gi|315920931|ref|ZP_07917171.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694806|gb|EFS31641.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 785

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 61/156 (39%), Gaps = 16/156 (10%)

Query: 266 SSNGKRALISV--QKDEAMDIYSVDLQSNATERLT---NTLFINISA---SYSPDSSQIV 317
           S +GKR       +     DI  VD+++     +    N  +++      S+  D  +I+
Sbjct: 300 SKDGKRLYFQRYNRPWNQSDICEVDVETGKVRVVIHEENKPYLDYQMRNVSFLNDGKEIL 359

Query: 318 FESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEK------ 370
           F S+R G    Y+  +   + K +++     +         G  + F  +  EK      
Sbjct: 360 FRSERNGWGHYYLYDTATGNLKNQLTDGIWVAGPVTKIDTIGRKMYFYGYGREKGIDPYY 419

Query: 371 FAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLI 405
           + +   + D  +  RLL  ++     + SPS R ++
Sbjct: 420 YILYEAQLDRPNAVRLLTPENASHDVSISPSYRYMV 455



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 50/399 (12%), Positives = 128/399 (32%), Gaps = 75/399 (18%)

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR------LW 131
            F L+ Q+   +   + +  P F +    G          +EGK    V  +      L+
Sbjct: 34  KFRLLEQNPIIK--YSTEVKPTFIN----GTDCFYYSFTTREGKKYYYVNPKKKEKRLLF 87

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           D     +++ K    +  ++      +S    +     + DF+            G+   
Sbjct: 88  DTA---ELLSKIAVYTKKAYSSADPYLSFTFMKDNETIRIDFD-----------RGLYTY 133

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++        N +    + D   +  ++SP+     YA+ D  ++  V       D  P 
Sbjct: 134 NIHTKALKQLNEKPSYGNSDP--YWMKYSPDSLYFLYASKD--NLYFVGNQKKGQDTIPV 189

Query: 252 RIGNFRSMIL-----------------APRFSSNGKRALISVQKDEA--MDIYSVDLQSN 292
           ++                         +  +   G     +V++D     D++ ++  S 
Sbjct: 190 QLTTDGEPNYTFNREDEGKLEGRFGAESTHWIP-GSHRFYAVREDNRKVRDLWLINSLST 248

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L                 + V       + +L +   +  + K+I  ++    +  
Sbjct: 249 PYPTLKTYKAELA-------GDKHV------TQYELLIGDVDTREVKKIDINRWPDQYID 295

Query: 353 V--WSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVE-------DSNLQAPTWSPSG 401
           +   S  G  + F +++    +  I  +  +  + R+++        D  ++  ++   G
Sbjct: 296 ILYISKDGKRLYFQRYNRPWNQSDICEVDVETGKVRVVIHEENKPYLDYQMRNVSFLNDG 355

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + ++F  +++G     LY     G  +  +    + + P
Sbjct: 356 KEILFRSERNGWGHYYLYDT-ATGNLKNQLTDGIWVAGP 393


>gi|224049756|ref|XP_002189128.1| PREDICTED: WD repeat domain 17 [Taeniopygia guttata]
          Length = 1321

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 69/197 (35%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +  +  Y +P  + +++   ++P N   +A  T  +      ++ D 
Sbjct: 412 TASFDGTIKVWDINTLSAVYTSPGNEGVIYSISWAPGNLNCIAGGTSRNGG----FIWDI 467

Query: 245 RIDRAPKRIGNF-RSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +   R     ++ I    +S  + KR       D    I ++D   N   +      
Sbjct: 468 QKGKLITRFSEHGKNGIFCIAWSHKDSKRIATCSS-DGFCIIRTID--GNVLHKY-KHPA 523

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 524 AVFGCDWSQNNKDMIATGCEDKNVRVYYLATSSDQPLKVFTGHTAKVFHVRWSPLREGIL 583

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 584 CSGSDDGTVRIWDYTQD 600


>gi|251795382|ref|YP_003010113.1| hypothetical protein Pjdr2_1351 [Paenibacillus sp. JDR-2]
 gi|247543008|gb|ACT00027.1| hypothetical protein Pjdr2_1351 [Paenibacillus sp. JDR-2]
          Length = 513

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 16/136 (11%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSS-----QIVFESDREGKEQLYVMQSNGS 336
            D+ ++DL +   + +      ++S S+          Q+   S  +G  +L+ +     
Sbjct: 174 YDVVALDLYNGRLKTIAANAVPDVSPSFFAKGWMNKSGQLYLNSYSDG--RLWSVDVLTG 231

Query: 337 DQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQ 393
             + I      E   +    SP G+L  F     + F +    ++G + +++        
Sbjct: 232 KIQSIEGQFKHEWPLYLVTPSPDGNL--FWHEQTDSFRLY--DRNGKELKVIPPTLGYHS 287

Query: 394 APT--WSPSGRSLIFS 407
            P   WSP  R    S
Sbjct: 288 YPAFEWSPDSRFAALS 303


>gi|160882928|ref|ZP_02063931.1| hypothetical protein BACOVA_00890 [Bacteroides ovatus ATCC 8483]
 gi|156111611|gb|EDO13356.1| hypothetical protein BACOVA_00890 [Bacteroides ovatus ATCC 8483]
          Length = 785

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 61/156 (39%), Gaps = 16/156 (10%)

Query: 266 SSNGKRALISV--QKDEAMDIYSVDLQSNATERLT---NTLFINISA---SYSPDSSQIV 317
           S +GKR       +     DI  VD+++     +    N  +++      S+  D  +I+
Sbjct: 300 SKDGKRLYFQRYNRPWNQSDICEVDVETGKVRVVIHEENKPYLDYQMRNVSFLNDGKEIL 359

Query: 318 FESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEK------ 370
           F S+R G    Y+  +   + K +++     +         G  + F  +  EK      
Sbjct: 360 FRSERNGWGHYYLYDTATGNLKNQLTDGIWVAGPVTKIDTIGRKMYFYGYGREKGIDPYY 419

Query: 371 FAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLI 405
           + +   + D  +  RLL  ++     + SPS R ++
Sbjct: 420 YILYEAQLDRPNAVRLLTPENASHDVSISPSYRYMV 455



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 50/399 (12%), Positives = 128/399 (32%), Gaps = 75/399 (18%)

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR------LW 131
            F L+ Q+   +   + +  P F +    G          +EGK    V  +      L+
Sbjct: 34  KFRLLEQNPIIK--YSTEVKPTFIN----GTDCFYYSFTTREGKKYYYVNPKKKEKRLLF 87

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           D     +++ K    +  ++      +S    +     + DF+            G+   
Sbjct: 88  DTA---ELLSKIAVYTKKAYSSADPYLSFTFMKDNETIRIDFD-----------RGLYTY 133

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++        N +    + D   +  ++SP+     YA+ D  ++  V       D  P 
Sbjct: 134 NIHTKALKQLNEKPSYGNSDP--YWMKYSPDSLYFLYASKD--NLYFVGNQKKGQDTIPV 189

Query: 252 RIGNFRSMIL-----------------APRFSSNGKRALISVQKDEA--MDIYSVDLQSN 292
           ++                         +  +   G     +V++D     D++ ++  S 
Sbjct: 190 QLTTDGEPNYTFNREDEGKLEGRFGAESTHWIP-GSHRFYAVREDNRKVRDLWLINSLST 248

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L                 + V       + +L +   +  + K+I  ++    +  
Sbjct: 249 PYPTLKTYKAELA-------GDKHV------TQYELLIGDVDTREVKKIDINRWPDQYID 295

Query: 353 V--WSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVE-------DSNLQAPTWSPSG 401
           +   S  G  + F +++    +  I  +  +  + R+++        D  ++  ++   G
Sbjct: 296 ILYISKDGKRLYFQRYNRPWNQSDICEVDVETGKVRVVIHEENKPYLDYQMRNVSFLNDG 355

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + ++F  +++G     LY     G  +  +    + + P
Sbjct: 356 KEILFRSERNGWGHYYLYDT-ATGNLKNQLTDGIWVAGP 393


>gi|74196818|dbj|BAE43131.1| unnamed protein product [Mus musculus]
 gi|148683012|gb|EDL14959.1| WD repeat domain 8, isoform CRA_b [Mus musculus]
          Length = 423

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/228 (14%), Positives = 81/228 (35%), Gaps = 16/228 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D     I  L    DQI     +S +   +         +++V+ ++      
Sbjct: 28  QYRLVIRDVTTLQILQLYTCLDQI-QHIEWSADSLFIL-CAMYRRGLVQVWSLEQPEWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACQQGLTF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ ++ + +   +     R             W+P G ++A    +  
Sbjct: 142 TRDGRYLALAERRDCRDYVSIFVCSDWQLLRHFDTDTQDLTGIEWAPNGCVLA-AWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKD 411
           ++ + +   DG   RLL           +++  WSPS + L       
Sbjct: 201 EYKVLLYSLDG---RLLSAYCAYEWSLGIKSVAWSPSSQFLAIGSYDG 245



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 53/158 (33%), Gaps = 9/158 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           RFS +GK     VQ      +   D+ +    +L   L       +S DS  I+    R 
Sbjct: 15  RFSPDGKYLASCVQ----YRLVIRDVTTLQILQLYTCLDQIQHIEWSADSLFILCAMYRR 70

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  Q++ ++    +      +  A      WSP G  I     +     I V        
Sbjct: 71  GLVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSV 126

Query: 384 RLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +       Q  T++  GR L  + ++D      ++ 
Sbjct: 127 SYIKYPKACQQGLTFTRDGRYLALAERRDCRDYVSIFV 164


>gi|115434270|ref|NP_001041893.1| Os01g0125800 [Oryza sativa Japonica Group]
 gi|12328528|dbj|BAB21186.1| putative WD40-repeat protein [Oryza sativa Japonica Group]
 gi|14090382|dbj|BAB55540.1| putative 66 kDa stress protein [Oryza sativa Japonica Group]
 gi|113531424|dbj|BAF03807.1| Os01g0125800 [Oryza sativa Japonica Group]
 gi|218187430|gb|EEC69857.1| hypothetical protein OsI_00212 [Oryza sativa Indica Group]
 gi|222617661|gb|EEE53793.1| hypothetical protein OsJ_00210 [Oryza sativa Japonica Group]
          Length = 610

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 46/244 (18%), Positives = 86/244 (35%), Gaps = 29/244 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAP 263
           +  P         RFSPN + VA  + D    +RV+     R  +A  R  + R   L  
Sbjct: 51  WAYPDHAYPTTVARFSPNGEWVA--SADASGCVRVWGRYGDRALKAEFRPLSGRVDDL-- 106

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNAT--------ERLTNTLFINISA-SYSPDSS 314
           R+S +G R ++S        + +    S +T        +R+ +  F             
Sbjct: 107 RWSPDGLRIVVSGDGKGKSFVRAFVWDSGSTVGEFDGHSKRVLSCDFKPTRPFRIVTCGE 166

Query: 315 QIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +         +      + S+    I    + S F    S     + +   +G+K  I
Sbjct: 167 DFLANYYEGPPFKFKHSIRDHSNFVNCIRYAPDGSKF-ISVSSDKKGLIYDGKTGDK--I 223

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI--DLNGRNETLI 431
           G +  +GS         ++ A +WSP  + ++       D  +K++ I  D +G+    +
Sbjct: 224 GELSSEGS------HTGSIYAVSWSPDSKQVL---TVSADKTAKVWDILEDASGKLNRTL 274

Query: 432 NTPA 435
             P 
Sbjct: 275 ACPG 278



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 46/134 (34%), Gaps = 8/134 (5%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVF 318
           I +   S +G    I   +D  + IYS++  +   E L            YSPD S    
Sbjct: 451 ITSSAVSPDGTE-AIVGAQDGKLRIYSINGDTVTEEALIEKHRGAITCIHYSPDVSMFA- 508

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMK 377
               +   +  V      + K  +    ++  +   WSP   L+A            + K
Sbjct: 509 --SADANREAVVWDRATREIKLKNMLFHSARINCLAWSPDNRLVATGSLDTCAIVYEIDK 566

Query: 378 KDGSQERLLVEDSN 391
              S  R+ V+ ++
Sbjct: 567 PASS--RITVKGAH 578



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S++ SPD ++      ++GK ++Y +  +   ++ + +    +     +SP   +  F 
Sbjct: 452 TSSAVSPDGTE-AIVGAQDGKLRIYSINGDTVTEEALIEKHRGAITCIHYSPD--VSMFA 508

Query: 365 KFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLI 405
                + A+ V  +   + +L   L   + +    WSP  R + 
Sbjct: 509 SADANREAV-VWDRATREIKLKNMLFHSARINCLAWSPDNRLVA 551



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 39/105 (37%), Gaps = 6/105 (5%)

Query: 197 DRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
             +G   ++    RD   F    R++P+  K    + D + ++       +I       G
Sbjct: 172 YYEGPPFKFKHSIRDHSNFVNCIRYAPDGSKFISVSSDKKGLIYDGKTGDKIGELSSE-G 230

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERL 297
           +    I A  +S + K+ L +V  D+   ++ +  D        L
Sbjct: 231 SHTGSIYAVSWSPDSKQVL-TVSADKTAKVWDILEDASGKLNRTL 274



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 51/151 (33%), Gaps = 19/151 (12%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +  +     SP+  +      D +  LR+Y ++         I   R  I    +S +  
Sbjct: 448 NYTITSSAVSPDGTEAIVGAQDGK--LRIYSINGDTVTEEALIEKHRGAITCIHYSPD-- 503

Query: 271 RALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSS----------QIV 317
              +    D   +    D  +   +    L ++  IN  A +SPD+            IV
Sbjct: 504 -VSMFASADANREAVVWDRATREIKLKNMLFHSARINCLA-WSPDNRLVATGSLDTCAIV 561

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +E D+    ++ V  ++      ++     S
Sbjct: 562 YEIDKPASSRITVKGAHLGGVHGLTFVDNDS 592


>gi|284054883|ref|ZP_06385093.1| WD-40 repeat-containing serine/threonin protein kinase [Arthrospira
           platensis str. Paraca]
          Length = 178

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 59/166 (35%), Gaps = 6/166 (3%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTN 299
           + D +  +    +      I    FS +G+    S  +D+ + ++  +LQ       L  
Sbjct: 1   MWDLKKGKPFYSLSGHSDRIYGVAFSPDGQTLA-SASRDKTVRLW--NLQQRQELGSLPR 57

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 + ++SP+   +     R+G   L+  Q       R  +  +A      + P   
Sbjct: 58  WSDWVRTVAFSPNGQMLA-GGCRDGSIGLWHQQDQTWKLWRTLRADDADILAIAFQPDSK 116

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +  T  S  +  I  +      E +    +++ +  +S  G+++ 
Sbjct: 117 QLI-TGNSKGQIDIWQLGDGTLLETIPAHSADILSLAFSLDGKTIA 161



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 55/161 (34%), Gaps = 9/161 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             Y        ++   FSP+ Q +A A+ D      V L + +  +    +  +   +  
Sbjct: 9   PFYSLSGHSDRIYGVAFSPDGQTLASASRDK----TVRLWNLQQRQELGSLPRWSDWVRT 64

Query: 263 PRFSSNGKRALISVQKDEAMDIY-SVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
             FS NG+       +D ++ ++   D        L       ++ ++ PDS Q++    
Sbjct: 65  VAFSPNGQMLA-GGCRDGSIGLWHQQDQTWKLWRTLRADDADILAIAFQPDSKQLI---T 120

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              K Q+ + Q              A      +S  G  IA
Sbjct: 121 GNSKGQIDIWQLGDGTLLETIPAHSADILSLAFSLDGKTIA 161


>gi|189203381|ref|XP_001938026.1| platelet-activating factor acetylhydrolase IB subunit alpha
           [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187985125|gb|EDU50613.1| platelet-activating factor acetylhydrolase IB subunit alpha
           [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 468

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 43/122 (35%), Gaps = 6/122 (4%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L + + D    R         +    FSP+ Q VA  ++D      V L +         
Sbjct: 324 LSMREADWDACRSTLEGHSFHVSAVAFSPDGQLVASGSWDK----TVRLWEAATRTYRNT 379

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +    S + A  FS +G + + S   D+ + ++    +      L  +  I     +SPD
Sbjct: 380 LEGHSSGVSAVAFSPDG-QLVASASGDKTVRLWEA-AKGTCRSTLEGSSRIITYVDFSPD 437

Query: 313 SS 314
             
Sbjct: 438 GQ 439



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 52/146 (35%), Gaps = 9/146 (6%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           F+P +  V   +     E +  + + +   D     +      + A  FS +G + + S 
Sbjct: 302 FAPERSLVRQTFKEQVLEKVKMLSMREADWDACRSTLEGHSFHVSAVAFSPDG-QLVASG 360

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNG 335
             D+ + ++     +             +SA ++SPD   +   S   G + + + ++  
Sbjct: 361 SWDKTVRLWE--AATRTYRNTLEGHSSGVSAVAFSPDGQLVASAS---GDKTVRLWEAAK 415

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLI 361
              +   +          +SP G ++
Sbjct: 416 GTCRSTLEGSSRIITYVDFSPDGQVL 441



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 37/117 (31%), Gaps = 7/117 (5%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           +D      T E   F+   +  S       SG    ++ + +      R         + 
Sbjct: 329 ADWDACRSTLEGHSFHVSAVAFSPDGQLVASGSWDKTVRLWEAATRTYRNTLEGHSSGVS 388

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
              FSP+ Q VA A+ D      V L +         +     +I    FS +G+  
Sbjct: 389 AVAFSPDGQLVASASGDK----TVRLWEAAKGTCRSTLEGSSRIITYVDFSPDGQVL 441



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 40/108 (37%), Gaps = 11/108 (10%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD   +   S     + + + ++     +   +   +      +SP G L+A     
Sbjct: 349 AFSPDGQLVASGS---WDKTVRLWEAATRTYRNTLEGHSSGVSAVAFSPDGQLVASAS-- 403

Query: 368 GEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGD 413
                + + +      R  +E S+  +    +SP G+ L   R   GD
Sbjct: 404 -GDKTVRLWEAAKGTCRSTLEGSSRIITYVDFSPDGQVL---RTNQGD 447


>gi|302823222|ref|XP_002993265.1| hypothetical protein SELMODRAFT_136772 [Selaginella moellendorffii]
 gi|300138935|gb|EFJ05686.1| hypothetical protein SELMODRAFT_136772 [Selaginella moellendorffii]
          Length = 447

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 82/257 (31%), Gaps = 27/257 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  S   G ++     + R  A  R  + +R + L    +  ++  +A+    +   + V
Sbjct: 76  MDISAPGGSLEGEEEDLVRATAAARDSSSARPKFLQSMAWHKHKLLLAFVA--NPAHVLV 133

Query: 240 YLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALISVQKDE----AMDIYSVDLQSNA 293
              D    + P  +G    +  + A  +  N    L    +           +  L++ A
Sbjct: 134 VDYDDADAKNPFLLGHETQQRGVEAIEWRPNSGSILAVGCRGGVCLWTASGATPPLRTGA 193

Query: 294 TERLTNT-----------LFIN--ISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              L +              I+  +SA S+SP    +   S         V   +  +  
Sbjct: 194 VVPLVSAATKWSLVDFLRWGIDMPVSALSWSPCGRLLACGSSE--TPTFAVWDVSLGEST 251

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            + +      F   WSP GD +  T      F +       S+         L    WSP
Sbjct: 252 PLRRGMAGVQFMK-WSPLGDYLL-TAKVDASFHLWETMTWTSEPWA-SAGGALVGAAWSP 308

Query: 400 SGRSLIFSRKKDGDTGS 416
            GR ++ +  +    G+
Sbjct: 309 DGRMIMGAFDQSSTLGT 325


>gi|296233385|ref|XP_002761990.1| PREDICTED: aladin-like [Callithrix jacchus]
          Length = 476

 Score = 50.4 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  DD     V + +      P      +  + A  +       L    
Sbjct: 88  AWHPHTNKFAVALLDD----SVRVYNASSTIVPSLKHRLQRNVAALAWKPLSASVLAVAC 143

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++ +        S +++P   +++  S  +    + 
Sbjct: 144 QS-CILIWTLDPTSLSTRPSFGCAQMLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIR 200

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   +      +         + +WSP G  +  T  S   F +   +     ER     
Sbjct: 201 VWDVSTETCVPLPWFLGGGVTNLLWSPDGSKVLATTPSA-VFRVWEAQMWT-CERWPTLS 258

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 259 GRCQTGCWSPDGNRLLFT 276


>gi|302772479|ref|XP_002969657.1| hypothetical protein SELMODRAFT_146571 [Selaginella moellendorffii]
 gi|302823216|ref|XP_002993262.1| hypothetical protein SELMODRAFT_136731 [Selaginella moellendorffii]
 gi|300138932|gb|EFJ05683.1| hypothetical protein SELMODRAFT_136731 [Selaginella moellendorffii]
 gi|300162168|gb|EFJ28781.1| hypothetical protein SELMODRAFT_146571 [Selaginella moellendorffii]
          Length = 447

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 82/257 (31%), Gaps = 27/257 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  S   G ++     + R  A  R  + +R + L    +  ++  +A+    +   + V
Sbjct: 76  MDISAPGGSLEGEEEDLVRATAAARDSSSARPKFLQSMAWHKHKLLLAFVA--NPAHVLV 133

Query: 240 YLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALISVQKDE----AMDIYSVDLQSNA 293
              D    + P  +G    +  + A  +  N    L    +           +  L++ A
Sbjct: 134 VDYDDADAKNPFLLGHETQQRGVEAIEWRPNSGSILAVGCRGGVCLWTASGATPPLRTGA 193

Query: 294 TERLTNT-----------LFIN--ISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              L +              I+  +SA S+SP    +   S         V   +  +  
Sbjct: 194 VVPLVSAATKWSLVDFLRWGIDMPVSALSWSPCGRLLACGSSE--TPTFAVWDVSLGEST 251

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            + +      F   WSP GD +  T      F +       S+         L    WSP
Sbjct: 252 PLRRGMAGVQFMK-WSPLGDYLL-TAKVDASFHLWETMTWTSEPWA-SAGGALVGAAWSP 308

Query: 400 SGRSLIFSRKKDGDTGS 416
            GR ++ +  +    G+
Sbjct: 309 DGRMIMGAFDQSSTLGT 325


>gi|163845103|ref|YP_001622758.1| hypothetical protein BSUIS_B0983 [Brucella suis ATCC 23445]
 gi|163675826|gb|ABY39936.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
          Length = 324

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 95/281 (33%), Gaps = 28/281 (9%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           + GK   +     R +    +  +   +      + + +       V      +      
Sbjct: 55  VDGKSLVTGGEDGR-VCRIDAKGVVTELANIPRKWITAVATGPNGTVGFASGKTAWSRAA 113

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG    +    +++ +    F+P  Q++A A Y+        L+ T     P  +  ++ 
Sbjct: 114 DGKVQEFT---QERSVEGIAFAPKGQRLAIARYNG-----ATLIWTGTAAKPVEL-EWKG 164

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +   FS +G+  + S+Q++ A+  +   L+ N   R+T         S+S  +  +  
Sbjct: 165 AHIGITFSPDGRFLITSMQEN-ALHGWR--LEDNKHMRMTGYPAKVKDWSWSAKAKWLA- 220

Query: 319 ESDREGKEQLYVMQSNGSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                G     V    G D         +    ++        P G+ IA   ++     
Sbjct: 221 ---TSGAPAAIVWPFAGKDGPMGKAPLELGLRGDSMVTSVACHP-GEDIAAIGYNDG--M 274

Query: 373 IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKD 411
           I +++    +E LL       + +  W+  G  L+F  +  
Sbjct: 275 ILIVRFADQKEVLLRRPGKGAITSMAWNEDGYRLVFGSQAG 315



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 28/202 (13%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----F 302
               +       +L+   + +GK  +      E   +  +D +      L N        
Sbjct: 36  DDGHQTSTVHDGLLSAAMAVDGKSLV---TGGEDGRVCRIDAK-GVVTELANIPRKWITA 91

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +    +       + F S     +  +   ++G  Q+     +E S     ++P+G  +A
Sbjct: 92  VATGPN-----GTVGFAS----GKTAWSRAADGKVQE---FTQERSVEGIAFAPKGQRLA 139

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +++G      +     ++   L         T+SP GR LI S +++   G +L    
Sbjct: 140 IARYNGATL---IWTGTAAKPVELEWKGAHIGITFSPDGRFLITSMQENALHGWRL---- 192

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            + ++  +   PA   D  W  
Sbjct: 193 EDNKHMRMTGYPAKVKDWSWSA 214


>gi|162148842|ref|YP_001603303.1| protease II [Gluconacetobacter diazotrophicus PAl 5]
 gi|161787419|emb|CAP57014.1| putative protease II [Gluconacetobacter diazotrophicus PAl 5]
          Length = 695

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/276 (13%), Positives = 86/276 (31%), Gaps = 27/276 (9%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD-D 233
             +LF       G       V+  D A    + P+ +       FSP+ + + +   D  
Sbjct: 146 DHLLFAHAEDNQGSEVYR--VVISDIARGTPVGPAIENCSGNFAFSPDARHLFWTWRDAH 203

Query: 234 EDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
               +++      D              +    S +G+  +IS    +  + + +     
Sbjct: 204 GRPTKIFRRRIGTDEDVLVYEETDPGFFIGVEASRSGRWIVISASNQDTSESWLIP--GG 261

Query: 293 ATERLTNTLFINISA-------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             E         +         S S    +    ++ +G     +M++  +   R     
Sbjct: 262 NPE----AAAACVEPRRTGVLYSLSHWGDRFAILTNTDGAVDFKLMEAPDTTPGRAHWRD 317

Query: 346 EASYFDPVWSPQ----GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP-- 399
              +    +          + + +      A+ V + DG++  +L  D +    ++S   
Sbjct: 318 LVPHLPGRYITDCMAFSGHLVWRERRDANTALVVRRVDGTEH-VLSSDEDAYVLSFSGSF 376

Query: 400 --SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
               R L +   +   T  + Y+ D++ R   L+ T
Sbjct: 377 EYDTRELRYV-YQSPTTPRQWYAYDMDSRTRHLLKT 411


>gi|124003366|ref|ZP_01688216.1| outer membrane protein [Microscilla marina ATCC 23134]
 gi|123991464|gb|EAY30895.1| outer membrane protein [Microscilla marina ATCC 23134]
          Length = 551

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 69/202 (34%), Gaps = 42/202 (20%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVD----LQSNATERLTNTLFI---------NISASY 309
           P  +++    + +  K++     + D    +      + T    I           + S 
Sbjct: 190 PVLTADQNTLIFTGVKNQPSRRVAPDESMYVSYKKNGQWTTPESISDKINTIDNEGTCSI 249

Query: 310 SPDSSQIVFE---SDREGKEQ-------LYVMQSNGS---DQKRISQD--KEASYFDPVW 354
           S D   +V+    + R G  +       L++    G    + K +  +    A    P  
Sbjct: 250 SADGKVLVYTVCENRRRGTRRGVIGICDLFISVKVGGKWSEPKNLGPNINTRAWESQPSL 309

Query: 355 SPQGDLIAFTKFSGEK---FAIGV--MKKDGS-------QERLLVEDSNLQAPTWSPSGR 402
           S  G  + F    G       I V  M +DG         ER+     +  +P    +GR
Sbjct: 310 SADGKTLYFASKRGGGKGGIDIWVSKMGEDGKWQPAKNLDERVNT-PRDEVSPFIHVNGR 368

Query: 403 SLIFSRK-KDGDTGSKLYSIDL 423
           +L FS +   G  G  L+S+DL
Sbjct: 369 TLYFSSEGHQGYGGKDLFSVDL 390



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 41/188 (21%)

Query: 294 TERLT---NTLFINISASYSPDSSQIVFE------SDR----EGKEQLYVMQSNGSDQKR 340
              LT   NTL+       + D + ++F       S R    E     Y      +  + 
Sbjct: 174 PTPLTPPLNTLYYQYFPVLTADQNTLIFTGVKNQPSRRVAPDESMYVSYKKNGQWTTPES 233

Query: 341 ISQDKEA--SYFDPVWSPQGDLIAFT-----KFSGEKFAIGVMKK------DG--SQERL 385
           IS       +      S  G ++ +T     +    +  IG+          G  S+ + 
Sbjct: 234 ISDKINTIDNEGTCSISADGKVLVYTVCENRRRGTRRGVIGICDLFISVKVGGKWSEPKN 293

Query: 386 L---VEDSNLQA-PTWSPSGRSLIFSRKK-DGDTGSKLYS--IDLNGRNE------TLIN 432
           L   +     ++ P+ S  G++L F+ K+  G  G  ++   +  +G+ +        +N
Sbjct: 294 LGPNINTRAWESQPSLSADGKTLYFASKRGGGKGGIDIWVSKMGEDGKWQPAKNLDERVN 353

Query: 433 TPAYASDP 440
           TP     P
Sbjct: 354 TPRDEVSP 361



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 43/128 (33%), Gaps = 24/128 (18%)

Query: 218 RFSPNQQKVAYATYDDEDI-----------LRVYLMDTRIDRAPKRIG---NFRSMILAP 263
             S + + + Y   ++              L + +        PK +G   N R+    P
Sbjct: 248 SISADGKVLVYTVCENRRRGTRRGVIGICDLFISVKVGGKWSEPKNLGPNINTRAWESQP 307

Query: 264 RFSSNGKRALISVQKD---EAMDIYSV----DLQSNATERL---TNTLFINISASYSPDS 313
             S++GK    + ++      +DI+      D +    + L    NT    +S     + 
Sbjct: 308 SLSADGKTLYFASKRGGGKGGIDIWVSKMGEDGKWQPAKNLDERVNTPRDEVSPFIHVNG 367

Query: 314 SQIVFESD 321
             + F S+
Sbjct: 368 RTLYFSSE 375



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 75/229 (32%), Gaps = 36/229 (15%)

Query: 157 TISDDIY----QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD------RDG--ANIR 204
           +ISD I     +       D    +  V E+   G  +  + + D        G  +  +
Sbjct: 233 SISDKINTIDNEGTCSISADGKVLVYTVCENRRRGTRRGVIGICDLFISVKVGGKWSEPK 292

Query: 205 YLTPSRDQILF--EPRFSPNQQKVAYATYD--DEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            L P+ +   +  +P  S + + + +A+     +  + +++     D   +   N    +
Sbjct: 293 NLGPNINTRAWESQPSLSADGKTLYFASKRGGGKGGIDIWVSKMGEDGKWQPAKNLDERV 352

Query: 261 LAPR--FSS----NGKRALISV---QKDEAMDIYSVDL------QSNATERLTNTLFINI 305
             PR   S     NG+    S    Q     D++SVDL      +S       N     +
Sbjct: 353 NTPRDEVSPFIHVNGRTLYFSSEGHQGYGGKDLFSVDLFSLAKEKSKNLGYPINDYRDQV 412

Query: 306 SASYSPDSSQIVFE-----SDREGKEQLYVMQSNGSDQKRISQDKEASY 349
               + D  +  +      + R    +L         + +I+ +    Y
Sbjct: 413 GLFITTDGKKGYYTQEEVVNGRMATSKLATFDMPDQIKPKITSNYVQGY 461


>gi|114052350|ref|NP_001039811.1| WD repeat-containing protein 1 [Bos taurus]
 gi|117940104|sp|Q2KJH4|WDR1_BOVIN RecName: Full=WD repeat-containing protein 1
 gi|86821067|gb|AAI05342.1| WD repeat domain 1 [Bos taurus]
          Length = 606

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 78/257 (30%), Gaps = 55/257 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + + D   I  +       +   +++P+   +A  + D    LR++    +       
Sbjct: 40  VILRNIDNPAIADIYTEHAHQVVVAKYAPSGFYIA--SGDVSGKLRIWDTTQKEHLLKYE 97

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK--------------------DEAMDIYSVDLQSN 292
              F   I    ++ + KR  +  +                          I SVD++ +
Sbjct: 98  YQPFAGKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQS 157

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RL      N +A +             EG    +    +         D        
Sbjct: 158 RPYRLVTGSDDNCAAFF-------------EGPPFKFKFTIS---------DHGRFVNCV 195

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFS 407
            +SP G+  A     G    I +      ++          D  + A +WSP    L+  
Sbjct: 196 RFSPDGNRFATASADG---QIFIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLL-- 250

Query: 408 RKKDGDTGSKLYSIDLN 424
               GD  SK++ +++N
Sbjct: 251 -SASGDKTSKIWDVNVN 266



 Score = 46.2 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 58/383 (15%), Positives = 115/383 (30%), Gaps = 66/383 (17%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS++V  D + +       +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVSKIVGGDPKGNSFLYTNGKCVILRNIDNPAIADIYTE----HAHQVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 65  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIA--------------- 109

Query: 171 GDFNSRILFVSESVVSGIIKNSLC-----VMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
              +S+ + V            L      V +  G N   +  S D     P        
Sbjct: 110 WTEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHN--KVINSVDIKQSRP-------- 159

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             Y      D       +    +    I +    +   RFS +G R   +   D    I+
Sbjct: 160 --YRLVTGSDDNCAAFFEGPPFKFKFTISDHGRFVNCVRFSPDGNRFA-TASADG--QIF 214

Query: 286 SVDLQSNATE-RLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             D ++      L  +   +      S+SPDS+ ++  S  +   +++ +  N S     
Sbjct: 215 IYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLLSASG-DKTSKIWDVNVN-SVVNTF 272

Query: 342 SQDKEASY--FDPVWSPQ-------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +            +W             I +   +     + V+K      + L    N 
Sbjct: 273 TMGSNVLDQQLGCLWQKDHLLSISLSGYINYLDKNNPSKPLRVIKGHSKSIQCLTVHKNG 332

Query: 393 QAPTWSPSGRSLIFSRKKDGDTG 415
                   G+S I+S   DG   
Sbjct: 333 --------GKSYIYSGSHDGHIN 347


>gi|87309463|ref|ZP_01091598.1| vegetatible incompatibility protein [Blastopirellula marina DSM
           3645]
 gi|87287771|gb|EAQ79670.1| vegetatible incompatibility protein [Blastopirellula marina DSM
           3645]
          Length = 929

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 85/229 (37%), Gaps = 18/229 (7%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEP 217
           +D I   +T    DFNS +  +     +      L +    DG  + +L  +   +++  
Sbjct: 711 ADLISHRVT--SLDFNSDVSLLLVGSGAPSRSGELGLFRVADGTQLHHLPKAHTDVVYAA 768

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FSP+  +  + +   +  LR++  D + ++  ++        L   +  + +    S  
Sbjct: 769 KFSPDGTQ--FLSAGADKYLRIW--DVKTEKLLRQFEGHTDYALGVAWKGDAQTIA-SAS 823

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + ++  +++S   +R       +I+A      +  V  S  +G  +L    +NG  
Sbjct: 824 ADQTLKVW--NVESTDQQRTITGYGKDITALKYVGETDQVISSCGDGTVRLQT-SANGKT 880

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +  +            +  G L+      G  F       DG+  + L
Sbjct: 881 IR--NFAAGIWLHCVDVTADGTLVVACSDDGRLFVW-----DGASGKQL 922



 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/179 (12%), Positives = 56/179 (31%), Gaps = 24/179 (13%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERL--------TNTL 301
           + +        A     +G++  +++       +Y  D  S     +L        T   
Sbjct: 144 EPLAGSLGPAYAVAIKPDGRQIAVTLAN----QLYVYDAASGQRLAQLQDSALDPATAHR 199

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            ++ + ++S D + +       G  +   +     + +  +    ++      SP    +
Sbjct: 200 DLSKTLAWSSDGTLLA-----SGGYREVKLWRQPHEARLATLPTGSAATAIAVSPDQKWL 254

Query: 362 AFTKFSGEKFAIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           A          I +     +    ++   D  + A  ++  G+ L+ S   DG     L
Sbjct: 255 AIAAAD---HTIQLWNAATAEPGPKMTGHDKQVTALRFTADGQRLV-SASLDGTIRIWL 309


>gi|323453571|gb|EGB09442.1| hypothetical protein AURANDRAFT_13246 [Aureococcus anophagefferens]
          Length = 235

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 69/228 (30%), Gaps = 34/228 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS +  ++    +D+       L D       +        +    F+  G   L++  
Sbjct: 5   AFSRDGARLLTGGWDN----CARLWDAASGALERTFEGHGGAVYGCAFADGGDGRLVTGS 60

Query: 278 KDEAMDIY------SVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDREGKEQL 328
           +D    ++       +       E +T    +     S S+           DR     +
Sbjct: 61  RDRTARVWDSASGAVLATHGGHGESVTCCALSDARGASGSW-----------DRG----V 105

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V  +   +   + +      +   +SP G  +             V    G+   +L  
Sbjct: 106 RVWSAATGELHVVLEGHGGGIYSVAFSPDGSRLVSGSEDATARCYDVW--TGAPLFVLAH 163

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           D  ++   +S  G  ++ +     D  +++Y+    G  ET +   A 
Sbjct: 164 DRTVRCCAFSDDGAWIVSASY---DATARIYN-GATGEEETKLRGHAE 207



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 57/189 (30%), Gaps = 9/189 (4%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G+    S     ++  + S  +  +  G  G+  +          SG     + V     
Sbjct: 54  GRLVTGSRDRTARVWDSASGAVL-ATHGGHGESVTCCALSDARGASGSWDRGVRVWSAAT 112

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +  +       ++   FSP+  ++   + D                AP  +      +
Sbjct: 113 GELHVVLEGHGGGIYSVAFSPDGSRLVSGSEDATARCYDVW-----TGAPLFVLAHDRTV 167

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               FS +G   + S   D    IY+         +L       +  ++S D    VF  
Sbjct: 168 RCCAFSDDGAWIV-SASYDATARIYN-GATGEEETKLRGHAEKVLCCTFSRDGET-VFTG 224

Query: 321 DREGKEQLY 329
            R+G  + +
Sbjct: 225 SRDGTVRTW 233


>gi|256084216|ref|XP_002578327.1| hypothetical protein [Schistosoma mansoni]
 gi|238663696|emb|CAZ34565.1| conserved hypothetical protein [Schistosoma mansoni]
          Length = 720

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 52/160 (32%), Gaps = 5/160 (3%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               + +      +    FS + ++ + S   D  + ++S  +   A     + L     
Sbjct: 380 THLTRDLLGHLGSVFGVAFSPD-RQLIASASSDGTVRLWSTLIWGGALTAWRDHLLPVWC 438

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +++P     +     +    LY       D  R+    +         P  + +A T  
Sbjct: 439 VTWAPTYGHYIATGGADRSAHLYATDHA-PDALRVFVGHKGDVTSVCIHPNVNYLA-TGS 496

Query: 367 SGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
           +     +  ++  G   R+      ++Q   +SP GR L 
Sbjct: 497 ADRAVRLFDVR-SGKLTRIYTGHKGSVQTLAFSPCGRYLA 535



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 51/156 (32%), Gaps = 10/156 (6%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                +F   FSP++Q +A A+ D    +    +    +      +     +  AP +  
Sbjct: 388 GHLGSVFGVAFSPDRQLIASASSDGTVRLWSTLIWGGALTAWRDHLLPVWCVTWAPTY-- 445

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKE 326
            G     +   D +  +Y+ D   +A            S    P+ + +   S DR    
Sbjct: 446 -GHYIA-TGGADRSAHLYATDHAPDALRVFVGHKGDVTSVCIHPNVNYLATGSADRA--- 500

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            + +         RI    + S     +SP G  +A
Sbjct: 501 -VRLFDVRSGKLTRIYTGHKGSVQTLAFSPCGRYLA 535


>gi|298246707|ref|ZP_06970512.1| hypothetical protein Krac_4172 [Ktedonobacter racemifer DSM 44963]
 gi|297549366|gb|EFH83232.1| hypothetical protein Krac_4172 [Ktedonobacter racemifer DSM 44963]
          Length = 433

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 98/301 (32%), Gaps = 37/301 (12%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
            + H  S ++ +    E     +    +     +G   + + ++  DG + + L  S + 
Sbjct: 107 DVLHNDSSEVTREEIKESLVSANGTWLLMLVHSNG--HDEVRLLRLDGKDEQTLYCSPNG 164

Query: 213 ILFEP-RFSPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNG 269
              E  ++SP+Q  +A++     + +  +YL++    +  K     R     P  + + G
Sbjct: 165 AQLESVQWSPDQTYIAWSLIPATDKLPDLYLLNLHSGQITKVAQATRYKGYQPGSWLNAG 224

Query: 270 KRALISVQKDEAMD-IYSVDLQSNATERLTNTLFINISASY----SPDSSQIVFESDREG 324
           +  +    KD +   +Y +D+       L           +    S D   + + S+  G
Sbjct: 225 QLLVKDSLKDGSSQALYVLDITKKPLPGLRQIFQPETPLCWDYVASGDGKTL-YISECAG 283

Query: 325 KEQLYV-------MQSNGSDQKRISQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAI-- 373
              +Y                + I      +     ++      L+A    S     I  
Sbjct: 284 GNSIYRGPSTISAFHLASDKTEEIWHSNTMAVTALRFAAKSDKQLLAIIGNSAPGMQIPT 343

Query: 374 -----GVMKKDGSQERLLVED--------SNLQAPT--WSPSGRSLIFSRKKDGDTGSKL 418
                 ++   G    + V +        ++L+ P   +S  G   +     +   G KL
Sbjct: 344 ELNGLWMISTSGEDITIAVTNKYGEYSAFADLRDPWSNFSRDGTMYVLHTTSNEGQGDKL 403

Query: 419 Y 419
           Y
Sbjct: 404 Y 404



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKD 411
           S  G  +     S     + +++ DG  E+ L      + L++  WSP    + +S    
Sbjct: 127 SANGTWLLMLVHSNGHDEVRLLRLDGKDEQTLYCSPNGAQLESVQWSPDQTYIAWSLIPA 186

Query: 412 GDTGSKLYSIDLNGRNETLIN 432
            D    LY ++L+    T + 
Sbjct: 187 TDKLPDLYLLNLHSGQITKVA 207


>gi|289621036|emb|CBI51819.1| unnamed protein product [Sordaria macrospora]
          Length = 870

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 45/255 (17%), Positives = 85/255 (33%), Gaps = 34/255 (13%)

Query: 207 TPSRDQILFEP-----RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           +  R +    P      ++P+  ++   T    +  R+Y   T  +  P  I + +   L
Sbjct: 7   SRPRSRPAHPPGATYCAYTPDGTRL--VTVGSNNTTRLY--KTGYEGEPTNIDDCQEQNL 62

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFES 320
           A   S+N     ++  +D  + +YS+D  +     L T+    ++  + SPD       S
Sbjct: 63  ALATSNN---YFVAGSEDGTVSLYSLDTNAFDRFLLRTSLPVRDV--AISPDYQWCAVAS 117

Query: 321 DR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           D             QL  ++ +G   K ++ D + S      +  G  + +      +  
Sbjct: 118 DELTVRLVGVNDNTQLRTLKEHGKPTKHLTFDPKGSLLALSCT-DG--VIYIYSLTAEHP 174

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             + K DG   RL  E        W P GR+              +  I  N   +  + 
Sbjct: 175 ELIRKVDGVIGRLETESEASSRAVWHPDGRAFAVPT-----PTRDIQVISKNDWEKQRVF 229

Query: 433 TPAYASDP---QWVG 444
              +  D     W  
Sbjct: 230 KNGHNGDITTLSWSP 244



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 70/224 (31%), Gaps = 20/224 (8%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+G    ++ +   D              + +   SP+ Q  A A+    D L V L+  
Sbjct: 72  VAGSEDGTVSLYSLDTNAFDRFLLRTSLPVRDVAISPDYQWCAVAS----DELTVRLVGV 127

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--------SNATER 296
             +   + +           F   G    +S   D  + IYS+  +             R
Sbjct: 128 NDNTQLRTLKEHGKPTKHLTFDPKGSLLALSCT-DGVIYIYSLTAEHPELIRKVDGVIGR 186

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWS 355
           L      +  A + PD               + V+  N  +++R+ ++          WS
Sbjct: 187 LETESEASSRAVWHPDGRAFA---VPTPTRDIQVISKNDWEKQRVFKNGHNGDITTLSWS 243

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           P G L+A    +G+   + +            E  N+    W P
Sbjct: 244 PNGALLA---SAGKDKKLLIWSTKDQSVIARYEYPNVTDICWHP 284



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 74/213 (34%), Gaps = 39/213 (18%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--------D 279
           +    ++  + +Y +DT          +    +     S + +   ++  +        +
Sbjct: 71  FVAGSEDGTVSLYSLDTNAFDRFLLRTSLP--VRDVAISPDYQWCAVASDELTVRLVGVN 128

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN----- 334
           +   + ++      T+ LT          + P  S +   S  +G   +Y + +      
Sbjct: 129 DNTQLRTLKEHGKPTKHLT----------FDPKGSLLA-LSCTDGVIYIYSLTAEHPELI 177

Query: 335 ---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                   R+  + EAS    VW P G   AF   +  +  I V+ K+  +++ + ++ +
Sbjct: 178 RKVDGVIGRLETESEASSRA-VWHPDGR--AFAVPTPTR-DIQVISKNDWEKQRVFKNGH 233

Query: 392 LQAP---TWSPSGRSLIFSRKKDGDTGSKLYSI 421
                  +WSP+G  L        D    ++S 
Sbjct: 234 NGDITTLSWSPNGALLA---SAGKDKKLLIWST 263


>gi|156846878|ref|XP_001646325.1| hypothetical protein Kpol_1032p61 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117000|gb|EDO18467.1| hypothetical protein Kpol_1032p61 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 822

 Score = 50.4 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 80/248 (32%), Gaps = 38/248 (15%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDE-DILRVY-LMDTRIDRAPKRIGN----------- 255
            R   ++    SP+ +++A    D +  I  +  +++  + + P  + N           
Sbjct: 15  HRKYEVYSADVSPDGKRLATGGLDGKIRIWSISSILEASVSKDPNNLSNDLKLPLASMSR 74

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---------------ERLTNT 300
               +   +FS +GK    S   D  + I++++ ++                  +RL   
Sbjct: 75  HTGSVTCVKFSPDGKYLA-SGSDDRILLIWALEEENRIEPVFGFEHDKEHWTVRKRLVAH 133

Query: 301 LFINISASYSPDSSQIVFES-DRE-------GKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                   ++PDSS +V    DR          E++     + S  K +  D    YF  
Sbjct: 134 DNDIQDICWAPDSSILVTVGLDRSIIVWNGVTFEKIKRFDVHQSHVKGVVFDPANKYFAT 193

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             S    L  F           V        +     +  +  +WSP G+ +      +G
Sbjct: 194 A-SDDRTLKIFRYHKTGDSMFTVEHIVRKPFKESPLTTYFRRLSWSPDGQHIAAPNATNG 252

Query: 413 DTGSKLYS 420
              S +  
Sbjct: 253 PVSSVVII 260


>gi|225557045|gb|EEH05332.1| periodic tryptophan protein [Ajellomyces capsulatus G186AR]
          Length = 929

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 75/210 (35%), Gaps = 16/210 (7%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +A+ +     +L V+   +      K+ G+  SM     +S +G++  I+   D  
Sbjct: 322 SGEWIAFGSSKLGQLL-VWEWQSE-SYILKQQGHLDSMNSL-VYSPDGQKI-ITAADDGR 377

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + ++  +         T       +  +S   + ++F +  +G  + + +     + +  
Sbjct: 378 IKVWDTN-SGFCIVTFTEHTSGVTACQFSKKGN-VLFTASLDGSIRAWDL-IRYRNFRTY 434

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSP 399
           +      +      P G+++         F + +      Q   RL      + + +++ 
Sbjct: 435 TAPSRLGFSCLAVDPSGEVVCAGSLD--SFDVHIWSVQTGQLLDRLAGHQGPVSSLSFAA 492

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            GR L+      G     +    + GR +T
Sbjct: 493 DGRHLV-----SGSWDHTIRIWSIFGRTQT 517



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 60/190 (31%), Gaps = 8/190 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ QK+  A  D     R+ + DT             S + A +FS  G   L +   
Sbjct: 362 YSPDGQKIITAADDG----RIKVWDTNSGFCIVTFTEHTSGVTACQFSKKGN-VLFTASL 416

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++       T    +  S   + D S  V  +       +++        
Sbjct: 417 DGSIRAWDL-IRYRNFRTYTAPSRLGFS-CLAVDPSGEVVCAGSLDSFDVHIWSVQTGQL 474

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                  +       ++  G  +    +      I  +         L   ++L +  + 
Sbjct: 475 LDRLAGHQGPVSSLSFAADGRHLVSGSWDHT-IRIWSIFGRTQTSEPLELQADLLSVAFR 533

Query: 399 PSGRSLIFSR 408
           P G+ +  S 
Sbjct: 534 PDGKQIAASS 543


>gi|198460650|ref|XP_001361777.2| GA10650 [Drosophila pseudoobscura pseudoobscura]
 gi|198137085|gb|EAL26356.2| GA10650 [Drosophila pseudoobscura pseudoobscura]
          Length = 342

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 61/185 (32%), Gaps = 7/185 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS      L + D             ++ + +   SPN + +A       D   V L D+
Sbjct: 68  VSASADRLLKLWDVRTIQSYQTLAGHEKGINDVVCSPNGKLIASC----GDDKTVKLWDS 123

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             +   K +    + +    F+      ++S   D ++ ++ +       + L       
Sbjct: 124 NSNSCAKTLQGHSNCVFCCCFNPQ-TNLILSASFDGSVHLWDL-RTGRTLKSLAAHGDST 181

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  ++   S  +  S  +G  +++   +    +  ++ D         +SP G  I  +
Sbjct: 182 TSVDFNRTGSHFI-TSSHDGFIRMWESATFHLVKTLLTDDDNPVVGHAKFSPNGKYILSS 240

Query: 365 KFSGE 369
            F   
Sbjct: 241 TFDNT 245


>gi|134085703|ref|NP_001076900.1| acylamino-acid-releasing enzyme [Bos taurus]
 gi|223590150|sp|P80227|ACPH_BOVIN RecName: Full=Acylamino-acid-releasing enzyme; Short=AARE; AltName:
           Full=Acyl-peptide hydrolase; Short=APH; AltName:
           Full=Acylaminoacyl-peptidase
 gi|133778092|gb|AAI23401.1| APEH protein [Bos taurus]
 gi|296474805|gb|DAA16920.1| acylamino-acid-releasing enzyme [Bos taurus]
          Length = 730

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 17/131 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY------ATYDDEDILRVYL 241
             +++L  +D  G N   L+      +  PR SP+Q ++ Y        +     L +Y 
Sbjct: 275 NRRSALYYVDLTGGNCELLSDD-SLAVTSPRLSPDQCRIVYLQFPSLVPHQQCGQLCLYD 333

Query: 242 MDTRIDRA-----PKRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQS 291
             TR+        P+++G   S I         +S++ +R +    +    D+++VD Q 
Sbjct: 334 WYTRVTVVVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDTAQRSRQDLFAVDTQM 393

Query: 292 NATERLTNTLF 302
                LT    
Sbjct: 394 GTVTPLTAGGS 404



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 61/187 (32%), Gaps = 29/187 (15%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDIL----------RVYL 241
           LCV+D +  NI  L    + +      ++P    V +A +  E                 
Sbjct: 222 LCVLDIESGNISVLEGVPESVSPGQAFWAPGDTGVVFAGWWHEPFRLGIRFCTNRRSALY 281

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEA-MDIYSVDLQSNA--- 293
                    + + +    + +PR S +  R +     S+   +    +   D  +     
Sbjct: 282 YVDLTGGNCELLSDDSLAVTSPRLSPDQCRIVYLQFPSLVPHQQCGQLCLYDWYTRVTVV 341

Query: 294 -----TERLT-NTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                  +L  N   I  S      +S DS ++VF++ +  ++ L+ + +       ++ 
Sbjct: 342 VVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDTAQRSRQDLFAVDTQMGTVTPLTA 401

Query: 344 DKEASYF 350
                 +
Sbjct: 402 GGSGGSW 408



 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 41/143 (28%), Gaps = 21/143 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV---FESDREGKE-- 326
                 +     +Y VDL     E L++      S   SPD  +IV   F S    ++  
Sbjct: 270 IRFCTNR--RSALYYVDLTGGNCELLSDDSLAVTSPRLSPDQCRIVYLQFPSLVPHQQCG 327

Query: 327 QLYVMQ--------SNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIG 374
           QL +                +++ ++    Y        WS     + F      +  + 
Sbjct: 328 QLCLYDWYTRVTVVVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDTAQRSRQDLF 387

Query: 375 VMKKDGSQERLLVEDSNLQAPTW 397
            +         L    +    +W
Sbjct: 388 AVDTQMGTVTPLTAGGSGG--SW 408


>gi|12835959|dbj|BAB23435.1| unnamed protein product [Mus musculus]
          Length = 606

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 76/257 (29%), Gaps = 55/257 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + + D   I  +       +   +++P+   +A  + D    LR++    +       
Sbjct: 40  VILRNIDNPAIADIYTEHAHQVAVAKYAPSGFYIA--SGDISGKLRIWDTTQKEHLLKYE 97

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK--------------------DEAMDIYSVDLQSN 292
              F   I    ++ + KR  +  +                          I SVD++  
Sbjct: 98  YQPFAGKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDTGSSVGEITGHNKVINSVDIKQT 157

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RL      N +A +             EG    +              D        
Sbjct: 158 RPYRLATGSDDNCAAFF-------------EGPPFKFKFTIG---------DHSRFVNCV 195

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFS 407
            +SP G+  A     G    I +      ++          D  + A +WSP    L+  
Sbjct: 196 RFSPDGNRFATASADG---QIFIYDGKTGEKVCALGESKAHDGGIYAISWSPDSTHLL-- 250

Query: 408 RKKDGDTGSKLYSIDLN 424
               GD  SK++ +++N
Sbjct: 251 -SASGDKTSKIWDVNVN 266


>gi|94968957|ref|YP_591005.1| peptidase S9, prolyl oligopeptidase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94551007|gb|ABF40931.1| peptidase S9, prolyl oligopeptidase [Candidatus Koribacter
           versatilis Ellin345]
          Length = 646

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 52/158 (32%), Gaps = 7/158 (4%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +  P+ +         P+ S +GK+       +  ++++   L       +T+     I
Sbjct: 28  TELIPRSVLFGNPERADPQISPDGKQLAYLAPVNGVLNVWVRTLGKTDDRAVTSDTNRGI 87

Query: 306 SAS-YSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGD 359
               +  D   +++  D  G    +LY         K ++   +       +S   P   
Sbjct: 88  RNFIWQYDDQHLLYLQDAGGDENWRLYQTDIATKQTKDLTPFDKVRVDIVAYSWKTPDAI 147

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           L+   +   + F +  +     +  L  ++    A +W
Sbjct: 148 LVQMNQRDPKVFDVHRVDLKTGKVTLDTQNPGDVA-SW 184



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 51/146 (34%), Gaps = 12/146 (8%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
                SPD  Q+ + +   G   ++V     +D + ++ D      + +W      + + 
Sbjct: 43  ADPQISPDGKQLAYLAPVNGVLNVWVRTLGKTDDRAVTSDTNRGIRNFIWQYDDQHLLYL 102

Query: 365 KFSGE--KFAIGVMKKDGSQERLLVE----DSNLQAPTW-SPSGRSLIFSRKKDGDTGSK 417
           + +G    + +        Q + L        ++ A +W +P   +++    +       
Sbjct: 103 QDAGGDENWRLYQTDIATKQTKDLTPFDKVRVDIVAYSWKTPD--AILVQMNQRDPKVFD 160

Query: 418 LYSIDLNGRNETL-INTPAYASDPQW 442
           ++ +DL     TL    P   +   W
Sbjct: 161 VHRVDLKTGKVTLDTQNPGDVA--SW 184



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 2/87 (2%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGR 402
                 DP  SP G  +A+         + V     + +R +  D+N  ++   W    +
Sbjct: 38  GNPERADPQISPDGKQLAYLAPVNGVLNVWVRTLGKTDDRAVTSDTNRGIRNFIWQYDDQ 97

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNET 429
            L++ +   GD   +LY  D+  +   
Sbjct: 98  HLLYLQDAGGDENWRLYQTDIATKQTK 124


>gi|157146607|ref|YP_001453926.1| 6-phosphogluconolactonase [Citrobacter koseri ATCC BAA-895]
 gi|157083812|gb|ABV13490.1| hypothetical protein CKO_02368 [Citrobacter koseri ATCC BAA-895]
          Length = 372

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 73/235 (31%), Gaps = 18/235 (7%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 43  KQTVYTASPESQQIHVWSLNHDGSLKLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 102

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPD-SSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
            Y +     A         +  S +  S D   + VF  S   G   + V + +      
Sbjct: 103 AYRIAPDDGALT-FAAESALPGSPTHISTDHQGRFVFVGSYNAGN--VSVTRLDDGLPAG 159

Query: 341 ISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNL 392
           +    E          SP    +       ++  +  +  DG        E   VE +  
Sbjct: 160 VVDVVEGLEGCHSANISPDNRTLWVPALKQDRICLFTLSDDGKLVAQEPAEVTTVEGAGP 219

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
           +   + P+ +   +   +   +       D +G  E   TL   PA  SD +W  
Sbjct: 220 RHMAFHPN-QQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPADFSDTRWAA 273



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 74/269 (27%), Gaps = 23/269 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
             +   DGA       +              + V   +Y+  ++    L D         
Sbjct: 104 YRIAPDDGALTFAAESALPGSPTHISTDHQGRFVFVGSYNAGNVSVTRLDDGLPAGVVDV 163

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-----ATERLTNTLFINISA 307
           +        A   S + +   +   K + + ++++            E  T         
Sbjct: 164 VEGLEGCHSA-NISPDNRTLWVPALKQDRICLFTLSDDGKLVAQEPAEVTTVEGAGPRHM 222

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVW------SPQGD 359
           ++ P+       ++      ++ ++    + + +       A + D  W      +P G 
Sbjct: 223 AFHPNQQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPADFSDTRWAADIHITPDGR 282

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPS--GRSLIFSRKKDGDTGS 416
            +     +     +  + +DGS             P  ++    G+ LI      G    
Sbjct: 283 HLYACDRTASLITVFSVSEDGSVLTKEGFQPTETQPRGFNVDHSGKYLI----AAGQKSH 338

Query: 417 KLYSIDLNGRNETLINTPAYA--SDPQWV 443
            +    + G    L     YA    P WV
Sbjct: 339 HIAVYAIAGEQGLLTEKGRYAVGQGPMWV 367


>gi|186471271|ref|YP_001862589.1| YVTN beta-propeller repeat-containing protein [Burkholderia
           phymatum STM815]
 gi|184197580|gb|ACC75543.1| 40-residue YVTN family beta-propeller repeat protein [Burkholderia
           phymatum STM815]
          Length = 385

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 75/205 (36%), Gaps = 23/205 (11%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV----D 288
           +     V ++D +  +  + + +         FS +G+  L++ + D+ + +Y       
Sbjct: 172 NSPPAEVAIVDLKTMKVVRSVKSGHE-TEGVEFSPDGRELLVTNEGDDTVSVYRTGTGKP 230

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +++   +R +    I      SPD  Q V   +   K   +V+   G+ +   + D +  
Sbjct: 231 VRTAKLDRGSRPRGIKA----SPDGKQYVVTLENTNK---FVVLDAGTLEPVKTVDTKMG 283

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLI 405
            +   + P G  +       +   +     D      + +          +++P G  ++
Sbjct: 284 PYGVAFDPSGKHLLVAAARDKTLQVF----DAKTYEHVADAPVGQRCWHFSFTPDGSKVL 339

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETL 430
            +  +       ++ +D N R +T+
Sbjct: 340 MACGRSN----AVFVLDANNRYQTV 360


>gi|115608830|ref|XP_001190479.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115610437|ref|XP_791722.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 427

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 11/150 (7%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +   FSP  + +A  ++  +    + L      +   ++       L+  +S +G+   
Sbjct: 287 AWTIAFSPEGRFLASGSHVGK----INLFGVESAKKESQLDTRGKFTLSIAYSPDGRFLA 342

Query: 274 ISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            S   D  ++I+  D+QS+     L        S  +SPDS  +   SD     Q+ +  
Sbjct: 343 -SGAIDGIVNIF--DIQSSKLLHTLEGHAKPIRSLCFSPDSQLLATASD---DGQIKIYD 396

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              ++         +      + P      
Sbjct: 397 VQQANLAGTLSGHSSWVTGIHFCPDNTHFV 426



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 73/223 (32%), Gaps = 40/223 (17%)

Query: 103 WNSLGAQV-LVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHT 157
           W   G Q+ +V+  +   G       L    RLWD++  KQ+  +   + P     IA  
Sbjct: 236 WTLEGHQLGVVSVDINPTGTIAASSSLDSHIRLWDLEVGKQM--RSIDAGPVDAWTIA-- 291

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                       +G F            SG     + +   + A       +R +     
Sbjct: 292 ---------FSPEGRFL----------ASGSHVGKINLFGVESAKKESQLDTRGKFTLSI 332

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + +A    D      V + D +  +    +      I +  FS +  + L +  
Sbjct: 333 AYSPDGRFLASGAIDG----IVNIFDIQSSKLLHTLEGHAKPIRSLCFSPD-SQLLATAS 387

Query: 278 KDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIV 317
            D  + IY V   +L       L+          + PD++  V
Sbjct: 388 DDGQIKIYDVQQANLAGT----LSGHSSWVTGIHFCPDNTHFV 426



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/213 (13%), Positives = 63/213 (29%), Gaps = 10/213 (4%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
               + D   +++        +     +P     A ++ D      + L D  + +  + 
Sbjct: 224 CWNWENDELKLKWTLEGHQLGVVSVDINPTGTIAASSSLDS----HIRLWDLEVGKQMRS 279

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I           FS  G+    S      ++++ V+       +L       +S +YSPD
Sbjct: 280 IDAGPVDAWTIAFSPEGRFLA-SGSHVGKINLFGVESA-KKESQLDTRGKFTLSIAYSPD 337

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                F +       + +     S      +          +SP   L+A T     +  
Sbjct: 338 GR---FLASGAIDGIVNIFDIQSSKLLHTLEGHAKPIRSLCFSPDSQLLA-TASDDGQIK 393

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           I  +++      L    S +    + P     +
Sbjct: 394 IYDVQQANLAGTLSGHSSWVTGIHFCPDNTHFV 426


>gi|307103506|gb|EFN51765.1| hypothetical protein CHLNCDRAFT_56362 [Chlorella variabilis]
          Length = 465

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 13/153 (8%)

Query: 182 ESVVSGIIKNSLCVM-DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +V+G    +L +         +       Q++ +  FSP+ + +A A++D      V 
Sbjct: 322 ERLVTGSDDFTLFLWEPSTQKQPKARMTGHMQLINQVTFSPDGRWIASASFDK----SVK 377

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTN 299
           L D                +    +S++  R L+S  KD  + ++  D++S      L  
Sbjct: 378 LWDGVSGTFIATFRGHVGPVYQVAWSAD-SRLLVSGSKDSTLKLW--DVRSKKLFMDLPG 434

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                 S  +SP+   +V      GK++L  + 
Sbjct: 435 HADEVFSVDWSPNGHSVV----SGGKDKLLKLW 463



 Score = 39.6 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 44/133 (33%), Gaps = 4/133 (3%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L++   D  + ++    Q     R+T  + +    ++SPD   I   S     + + +  
Sbjct: 324 LVTGSDDFTLFLWEPSTQKQPKARMTGHMQLINQVTFSPDGRWIASASF---DKSVKLWD 380

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +      +   WS    L+  +        +  ++       L      +
Sbjct: 381 GVSGTFIATFRGHVGPVYQVAWSADSRLLV-SGSKDSTLKLWDVRSKKLFMDLPGHADEV 439

Query: 393 QAPTWSPSGRSLI 405
            +  WSP+G S++
Sbjct: 440 FSVDWSPNGHSVV 452


>gi|260833738|ref|XP_002611869.1| hypothetical protein BRAFLDRAFT_59218 [Branchiostoma floridae]
 gi|322518338|sp|C3XVT5|LIS1_BRAFL RecName: Full=Lissencephaly-1 homolog
 gi|229297241|gb|EEN67878.1| hypothetical protein BRAFLDRAFT_59218 [Branchiostoma floridae]
          Length = 406

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 81/254 (31%), Gaps = 28/254 (11%)

Query: 175 SRILF--VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +R+LF  V   +VS     ++ + D +  +           + +  F    + +A  + D
Sbjct: 110 TRVLFHPVYSVMVSASEDATIKIWDYETGDFERTLKGHTDAVQDVSFDQQGKLLASCSAD 169

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 + L D +     K +      + +  F  NG    IS  +D+ + ++ +     
Sbjct: 170 M----TIKLWDFQTFENIKTMHGHDHNVSSVHFMPNGDFL-ISASRDKTIKMWEL-ATGY 223

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             +  T       +   + D S +   S+    + + V      + K   ++ E      
Sbjct: 224 CVKTFTGHREWVRTVRVNQDGSLLASCSN---DQTVRVWVVANKECKAELREHEHVVECI 280

Query: 353 VWSPQ---------------GDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAP 395
            W+P+               G    F         I +           L+  D+ ++  
Sbjct: 281 AWAPESCNGHVSEVMGAEKKGRSGPFLLSGSRDKTIKMWDISTGVCIMTLVGHDNWVRGV 340

Query: 396 TWSPSGRSLIFSRK 409
            W P G+ +I +  
Sbjct: 341 VWHPGGKYIISASD 354


>gi|118352546|ref|XP_001009544.1| conserved hypothetical protein [Tetrahymena thermophila]
 gi|89291311|gb|EAR89299.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
          Length = 2292

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 90/240 (37%), Gaps = 20/240 (8%)

Query: 186  SGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +G    +  + +   G  I     S  + +    FS + + +A ++    D   ++ ++ 
Sbjct: 1976 TGSHDKTCKIWNLGQGFEIINAIQSHTEKIKCAAFSKDCRYLATSS----DNTCIWDVE- 2030

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            +       I +  + + +  FS +GK    +  +D    I+S +      + + +     
Sbjct: 2031 KDFELIHVIRDHTNTVTSVAFSFDGKYLA-TGSEDNTCKIWSTEKGFEIVKTIKDHTSYI 2089

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAF 363
             S ++S ++  +   S         +  +  + +   + +    Y +   +SP    +A 
Sbjct: 2090 CSVAFSSNNKYLATGSV---DSTCKIWNAQNTFEMIKTLEGHTRYVNSVAFSPNSKFLA- 2145

Query: 364  TKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            T    E   I     + S E L+     +  +++ T+SP G+ L  S +   D   K++ 
Sbjct: 2146 TGSEDETCKIW--NTEKSFELLITIKAHNREIKSVTFSPDGKYLATSSE---DNTCKIWD 2200



 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 103/271 (38%), Gaps = 27/271 (9%)

Query: 161  DIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF--EP 217
            +I  S+ G      S     + + + +G   N+  + D D  N + +   ++   +    
Sbjct: 1694 EIINSLQGHSAPVKSVTFSPNCKYLATGSDDNTCRIWDVD-KNFQLVYTIKEHTHYVDSV 1752

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSNGKRALI 274
             FSP+ + +A  +YD     RV+     +++  + + N  S      +  FS++ K    
Sbjct: 1753 TFSPDGKYLATGSYD--KTCRVW----SVEKGFQLVKNIDSNNFQLTSIAFSADSKYLA- 1805

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +   D  + I++V         + N     +S S+S D+  +V  +   G   +Y + SN
Sbjct: 1806 TACWDNFLKIWNVHKDFEIITSI-NIRSSLVSVSFSIDNKYVV--ASMYGSCIVYDLLSN 1862

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--- 391
             ++  +  +  E       +S  G  +A            V     + E +     +   
Sbjct: 1863 FNEVNQF-KCHEEIIKQITFSKDGKYMATAANDNT---CKVWDVQKNFELVTTLQGHISS 1918

Query: 392  LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            + + ++S   + +    +   D   K+++ID
Sbjct: 1919 VYSVSFSADSKFIATGSQ---DKTCKIWNID 1946



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 56/341 (16%), Positives = 112/341 (32%), Gaps = 60/341 (17%)

Query: 72   DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
            DL++   F +I+     Q  + P     F        + L TG       D      R+W
Sbjct: 1688 DLEK--QFEIINS---LQGHSAPVKSVTFSP----NCKYLATGS-----DDN---TCRIW 1730

Query: 132  DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
            DV    Q++   +     +     H +    +       G          + + +G    
Sbjct: 1731 DVDKNFQLV---YTIKEHT-----HYVDSVTF----SPDG----------KYLATGSYDK 1768

Query: 192  SLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +  V   + G  +     S +  L    FS + + +A A +D  + L+++ +    +   
Sbjct: 1769 TCRVWSVEKGFQLVKNIDSNNFQLTSIAFSADSKYLATACWD--NFLKIWNVHKDFEIIT 1826

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISAS 308
                N RS +++  FS + K  + S+           DL SN     +      I    +
Sbjct: 1827 SI--NIRSSLVSVSFSIDNKYVVASM----YGSCIVYDLLSNFNEVNQFKCHEEIIKQIT 1880

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFS 367
            +S D   +   ++        V     + +   + Q   +S +   +S     IA T   
Sbjct: 1881 FSKDGKYMATAAN---DNTCKVWDVQKNFELVTTLQGHISSVYSVSFSADSKFIA-TGSQ 1936

Query: 368  GEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLI 405
             +   I     D   E +     + +     ++S +GR + 
Sbjct: 1937 DKTCKIW--NIDKGFELVDTIQGHFEHINSVSFSSNGRFIA 1975



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 77/207 (37%), Gaps = 17/207 (8%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSPN +   + T +D+    V+ ++   D   K I +    I +  FS NGK    +  +
Sbjct: 1582 FSPNDK--YFITINDQKDCTVFDLEKNFD-LIKIINDHNRQITSVSFSDNGKYMA-TGSR 1637

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D+   I++ +      + +          ++S D+  +   S  +   +++ ++      
Sbjct: 1638 DQTCKIWNTEQDFQLVKTILGHEETIEQVAFSWDNKYLA-TSSEDKVCKIWDLEKQFEII 1696

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQA 394
              + Q   A      +SP    +A T        I  +       +L+         + +
Sbjct: 1697 NSL-QGHSAPVKSVTFSPNCKYLA-TGSDDNTCRIWDVD---KNFQLVYTIKEHTHYVDS 1751

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             T+SP G+ L        D   +++S+
Sbjct: 1752 VTFSPDGKYLATGSY---DKTCRVWSV 1775


>gi|116191811|ref|XP_001221718.1| hypothetical protein CHGG_05623 [Chaetomium globosum CBS 148.51]
 gi|88181536|gb|EAQ89004.1| hypothetical protein CHGG_05623 [Chaetomium globosum CBS 148.51]
          Length = 619

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 69/195 (35%), Gaps = 17/195 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISV 276
           RFS + + VA        I  V   +       + I  N    I +  FS +GK    + 
Sbjct: 313 RFSHDGKYVATGCNRSAQIYDVNTGEKICVLQDESIDLNGDLYIRSVCFSPDGKYLA-TG 371

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +D+ + ++  D+Q+      T     +    S  ++ D   I   S   G   + +   
Sbjct: 372 AEDKLIRVW--DIQNRVIR--TTFAGHDQDIYSLDFARDGRTIASGS---GDRTVRIWDL 424

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-- 391
              +   ++   E        SP   L+A      +   +  +K     ERL   D +  
Sbjct: 425 ETGNCN-LTLTIEDGVTTVAISPDTKLVAAGSLD-KSVRVWDVKMGYLLERLEGPDGHKD 482

Query: 392 -LQAPTWSPSGRSLI 405
            + +  +SP+ R L+
Sbjct: 483 SVYSVAFSPNARELV 497


>gi|329906959|ref|ZP_08274526.1| surface antigen [Oxalobacteraceae bacterium IMCC9480]
 gi|327547132|gb|EGF32002.1| surface antigen [Oxalobacteraceae bacterium IMCC9480]
          Length = 315

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 69/201 (34%), Gaps = 19/201 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S + + V  A  +      + + DTR ++    I           FS +GK   +S +
Sbjct: 102 SISADGRWVVAAVEERN---EIVITDTRTNKLAFAIPVKGKNPEHAVFSPDGKLIFVSAE 158

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSN 334
           + +A+D   +D  +         + +        + PDSS+    ++     +++V+ + 
Sbjct: 159 EGDAVD--VIDFATRKEV---TQIAVGARPRGIGFLPDSSRAYVATENS--NEVFVIDAR 211

Query: 335 GSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNL 392
                 I++ K           P G  +  +  +G    + V+    +     V      
Sbjct: 212 TFKI--ITKVKAGLRANGITVHPDGSRVYIS--NGGDANVSVLDTATNTIIATVPVGQRP 267

Query: 393 QAPTWSPSGRSLIFSRKKDGD 413
                +P G+ L  +  + G 
Sbjct: 268 WNMAITPDGKKLYVANGRSGT 288



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 27/185 (14%), Positives = 71/185 (38%), Gaps = 11/185 (5%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +N + + D     + +  P + +      FSP+ + + + + ++ D + V    TR +  
Sbjct: 117 RNEIVITDTRTNKLAFAIPVKGKNPEHAVFSPDGK-LIFVSAEEGDAVDVIDFATRKEVT 175

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISAS 308
              +G     I    F  +  RA ++ +   + +++ +D ++     ++   L  N   +
Sbjct: 176 QIAVGARPRGIG---FLPDSSRAYVATEN--SNEVFVIDARTFKIITKVKAGLRAN-GIT 229

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             PD S+ V+ S+  G   + V+ +  +         +  +     +P G  +       
Sbjct: 230 VHPDGSR-VYISN-GGDANVSVLDTATNTIIATVPVGQRPWNM-AITPDGKKLYVANGRS 286

Query: 369 EKFAI 373
              ++
Sbjct: 287 GTVSV 291


>gi|317026233|ref|XP_001389225.2| NACHT and WD40 domain protein [Aspergillus niger CBS 513.88]
          Length = 1521

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 78/236 (33%), Gaps = 27/236 (11%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G  ++       + +     SP+ + +A      + +  + L  T      +        
Sbjct: 894  GPGLQSYEGHNGRSIIGVACSPDGEVIA----SMDKVGTIILWSTVTGTIRQSFKAIHDK 949

Query: 260  ILAP---------RFSSNGKRALISVQKDEAMDIYSVD--LQSNATERLTNTLFINISAS 308
               P          FS +GK      +K+  + ++     L      R    L+ +   +
Sbjct: 950  DELPKIQPGDSKLTFSPDGKLLASVFKKESGIQLWEAPTGLLHGEIPR---HLWCHDRPA 1006

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            ++PD + ++ +        L +         +  + +         S  G ++A    +G
Sbjct: 1007 FTPDGTTVLLQDISTNPHTLGLWNIAQRAFHQTLEGQIDELLASAISHDGQIVATGSDTG 1066

Query: 369  EKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                + +         Q ++ V D ++Q+  +SP    L       G  G+K++++
Sbjct: 1067 ---ILRLWNPALNLTVQSQIKVCDGSIQSLAFSPRDDLLA---SCSGHVGAKVWNV 1116



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 95/301 (31%), Gaps = 33/301 (10%)

Query: 134  KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
             + + +    +F +   W   +  +    Y+        F+    FVS +    +    L
Sbjct: 1136 YNGELVASCSWFGTAKLWNSTSGKLE---YELNRVRTFAFSPNGEFVSGTSDGIVRLWDL 1192

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             V +RD +     + S   +   P    N   V   TYD        L D        ++
Sbjct: 1193 RVGNRD-STPFSNSNSALSVHALPGCELNS--VLSITYDGSK-----LWDIPSGTPQHQL 1244

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTN------TLFIN 304
                  I  PRFS +G+     V +   +     D  S    R   +T+        +IN
Sbjct: 1245 EALEDPIFDPRFSDDGRLIAGVVNRTVKVW----DTSSGKLIRELQITDIEDWGIDDYIN 1300

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +  ++ PD   I +  D     +  V       Q   +          + S  G L+A T
Sbjct: 1301 VEIAFRPDGKIISWSLD---SLEFQVWDPFSGKQIE-TFTDSIELCSFIVSHDGHLLAVT 1356

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G K +I   +    +   L +   +      SP+   L       G+    L+ +  
Sbjct: 1357 --DGRKVSIR--EPSTGKHFYLEKSFESCLMMALSPNDMILATLSLSRGNLIVDLWDLPT 1412

Query: 424  N 424
            +
Sbjct: 1413 H 1413



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 53/293 (18%), Positives = 101/293 (34%), Gaps = 48/293 (16%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA--------NIRYLTPSRDQILFEPRF 219
             +   F++    +S   + G   NS+  +  DG+          ++   + +  +F+PRF
Sbjct: 1197 RDSTPFSNSNSALSVHALPGCELNSVLSITYDGSKLWDIPSGTPQHQLEALEDPIFDPRF 1256

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--------GNFRSMILAPRFSSNGKR 271
            S + + +A           V + DT   +  + +        G    + +   F  +GK 
Sbjct: 1257 SDDGRLIAGVVNRT-----VKVWDTSSGKLIRELQITDIEDWGIDDYINVEIAFRPDGK- 1310

Query: 272  ALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYV 330
             +IS   D               E  T T  I + S   S D   +     R    ++ +
Sbjct: 1311 -IISWSLDSLEFQVWDPFSGKQIE--TFTDSIELCSFIVSHDGHLLAVTDGR----KVSI 1363

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             + +      + +  E+       SP   ++A    S     + +      + R     S
Sbjct: 1364 REPSTGKHFYLEKSFESCLMM-ALSPNDMILATLSLSRGNLIVDLWDLPTHELR----SS 1418

Query: 391  NLQAPTWSPSGRSLIFSRKKDGD---TGSKLYSIDLNGRNETLINTPAYASDP 440
               A      GR + FS  +DG    TG ++Y I+ +     L++  A   DP
Sbjct: 1419 LNVA------GRKIQFS--EDGKCFCTGHEIYHIETDAEGH-LVSVAADV-DP 1461


>gi|301775787|ref|XP_002923302.1| PREDICTED: aladin-like isoform 3 [Ailuropoda melanoleuca]
          Length = 513

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/262 (13%), Positives = 83/262 (31%), Gaps = 26/262 (9%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLC-----------VMDRDGANIRYLTPSRDQILF 215
           T  + D  +R  F+           ++            + + +     ++  +    L 
Sbjct: 57  TPGRLDHGTRTAFIHHREQVWKRCINIWRDMGLFGVLNEIANSEEEVFEWVKTASSWALA 116

Query: 216 EPRF--SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             R+  S +     + +   ED++  +   T     P      +  + A  +       L
Sbjct: 117 LCRWASSLHGSLFPHLSLRSEDLIAEFAQVTNCTIVPSLKHRLQRNVAALAWKPLSASVL 176

Query: 274 ISVQKDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGK 325
               +   + I+++D  S +T       ++ +        S +++P   +++  S  +  
Sbjct: 177 AVACQT-CILIWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD-- 233

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + V   +      +   +     + +WSP G  +         F +   +     ER 
Sbjct: 234 AAILVWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVL-AATPSAVFRVWEAQMWT-CERW 291

Query: 386 LVEDSNLQAPTWSPSGRSLIFS 407
                  Q   WSP G  L+F+
Sbjct: 292 PTLSGRCQTGCWSPDGSRLLFT 313



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 61/209 (29%), Gaps = 42/209 (20%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V D        L   R   +    +SP+  KV  AT     + RV+          +R
Sbjct: 236 ILVWDVSTETCVPLPWFRGGGVTNLLWSPDGSKVLAAT--PSAVFRVWEAQMWT---CER 290

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                       +S +G R L +V       IYS+       ER                
Sbjct: 291 WPTLSGRCQTGCWSPDGSRLLFTVL--GEPLIYSLSF----PERCGEGKG---------- 334

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDLIAFTKFSG 368
                    R G  +   + ++ S+    + D E          VW P G+ +A      
Sbjct: 335 ---------RVGGAKSATIVADLSETTVQTPDGEERLGGEAHSMVWDPSGERLAVLMKGN 385

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +        DG    LL    N  +P +
Sbjct: 386 PRVQ------DGKPVILLFRTRN--SPVF 406


>gi|224066541|ref|XP_002302127.1| predicted protein [Populus trichocarpa]
 gi|222843853|gb|EEE81400.1| predicted protein [Populus trichocarpa]
          Length = 580

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 40/233 (17%), Positives = 94/233 (40%), Gaps = 16/233 (6%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-R 252
           C  D+  + I  +  +    ++  +FS N + +A ++ D   I  ++ +D     + K R
Sbjct: 254 CGRDQIPSRILQILEAHSDEVWFLQFSHNGKYLASSSNDRSAI--IWEIDVNGGVSLKHR 311

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSP 311
           +   +  + +  +S +  + L    ++    +   D+ S    ++   + +  +S  + P
Sbjct: 312 LSGHQKPVSSVSWSPDDHQLLTCGVEE---VVRRWDVSSGECLQVYEKVGLGLVSCGWFP 368

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I F    +  + + + + +G + +     K     D   +  G  I          
Sbjct: 369 DGKWI-FSGIND--KSICMWELDGKEVECWKGQKTLKISDLEITSDGKQIISMCRPT--- 422

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           AI ++ ++   ER++ ED  + + + S   R L+ +     +    L+SID N
Sbjct: 423 AILLLDREAKAERVIEEDQTITSFSLSRDNRFLLVNLL---NQEIHLWSIDGN 472


>gi|226532237|ref|NP_001148971.1| LOC100282591 [Zea mays]
 gi|195623704|gb|ACG33682.1| notchless-like protein [Zea mays]
 gi|223947989|gb|ACN28078.1| unknown [Zea mays]
          Length = 471

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 64/155 (41%), Gaps = 13/155 (8%)

Query: 182 ESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    ++ + +       +       +++    FSP+ Q +A A++D      V 
Sbjct: 328 ERLVSGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDK----SVK 383

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTN 299
           L +    +         + +    +S++  R L+S  KD  + I+  D++++  +  L  
Sbjct: 384 LWNGITGKFVAAFRGHVADVYQISWSAD-SRLLLSGSKDSTLKIW--DIRTHKLKMDLPG 440

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                 +  +SPD  ++       GK+++  +  N
Sbjct: 441 HADEVYTVDWSPDGEKVA----SGGKDRVLKLWMN 471



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 34/96 (35%), Gaps = 9/96 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A  + D      V   D             ++ +L   +S +GK  + S  
Sbjct: 113 SFSPDGKSLASGSGDT----TVRFWDLSTQTPLFTCKGHKNWVLCIAWSPDGKHLV-SGS 167

Query: 278 KDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP 311
           K   + ++  D ++       L        + S+ P
Sbjct: 168 KSGELILW--DPKTGNQLGTPLMGHRKWITAVSWEP 201



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 41/139 (29%), Gaps = 14/139 (10%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +S+ SG    ++   D       +        +    +SP+ + +   +   +    +  
Sbjct: 119 KSLASGSGDTTVRFWDLSTQTPLFTCKGHKNWVLCIAWSPDGKHLVSGS---KSGELILW 175

Query: 242 MDTRIDRAPKRIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNA-T 294
                ++    +   R  I A  +      S    R  +S  KD    I+  D+ +    
Sbjct: 176 DPKTGNQLGTPLMGHRKWITAVSWEPVHLQSP--CRRFVSASKDGDARIW--DITTRKCV 231

Query: 295 ERLTNTLFINISASYSPDS 313
             LT          +  D 
Sbjct: 232 ISLTGHTSSVTCVKWGGDG 250



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 44/154 (28%), Gaps = 19/154 (12%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++   +      R+T    +     +SPD   +   S     + + +  
Sbjct: 330 LVSGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASF---DKSVKLWN 386

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGV----MKKDGSQERLL 386
                     +   A  +   WS    L+           + I      M   G  + + 
Sbjct: 387 GITGKFVAAFRGHVADVYQISWSADSRLLLSGSKDSTLKIWDIRTHKLKMDLPGHADEVY 446

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             D       WSP G  +        D   KL+ 
Sbjct: 447 TVD-------WSPDGEKVA---SGGKDRVLKLWM 470



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 54/175 (30%), Gaps = 20/175 (11%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           ++R    I      ++A  FS +GK    S   D  +  + +   S  T   T     N 
Sbjct: 95  VNRCSATIAGHTEAVIAVSFSPDGKSLA-SGSGDTTVRFWDL---STQTPLFTCKGHKNW 150

Query: 306 SA--SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVW------SP 356
               ++SPD   +V  S      +L +      +Q          +     W      SP
Sbjct: 151 VLCIAWSPDGKHLVSGSKSG---ELILWDPKTGNQLGTPLMGHRKWITAVSWEPVHLQSP 207

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
               +  +        I  +        L    S++    W   G  LI++  +D
Sbjct: 208 CRRFV--SASKDGDARIWDITTRKCVISLTGHTSSVTCVKWGGDG--LIYTGSQD 258


>gi|149047324|gb|EDL99993.1| WD repeat protein 1 [Rattus norvegicus]
          Length = 606

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 72/244 (29%), Gaps = 55/244 (22%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   +++P+   +A  + D    LR++    +          F   I    +
Sbjct: 53  IYTEHAHQVVVAKYAPSGFYIA--SGDISGKLRIWDTTQKEHILKYEYQPFAGKIKDIAW 110

Query: 266 SSNGKRALISVQK--------------------DEAMDIYSVDLQSNATERLTNTLFINI 305
           + + KR  +  +                          I SVD++ N   RL      N 
Sbjct: 111 TEDSKRIAVVGEGREKFGAVFLWDTGSSVGEITGHNKVINSVDIKQNRPYRLATGSDDNC 170

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A +             EG    +              D         +SP G+  A   
Sbjct: 171 AAFF-------------EGPPFKFKFTIG---------DHSRFVNCVRFSPDGNRFATAS 208

Query: 366 FSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G    I +      ++          D  + A +WSP    L+      GD  SK++ 
Sbjct: 209 ADG---QIFIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLL---SASGDKTSKIWD 262

Query: 421 IDLN 424
           +++N
Sbjct: 263 VNVN 266



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 72/215 (33%), Gaps = 36/215 (16%)

Query: 108 AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA-----HTI 158
           A  +V  +    G       +  + R+WD   ++ I+  ++       + IA       I
Sbjct: 58  AHQVVVAKYAPSGFYIASGDISGKLRIWDTTQKEHILKYEYQPFAGKIKDIAWTEDSKRI 117

Query: 159 S---------DDIYQSITGEK-GDFNSRILFVSESVVSGIIKNSLCVMDRD-------GA 201
           +           ++   TG   G+       ++   +       L     D       G 
Sbjct: 118 AVVGEGREKFGAVFLWDTGSSVGEITGHNKVINSVDIKQNRPYRLATGSDDNCAAFFEGP 177

Query: 202 NIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-- 257
             ++     D   F    RFSP+  + A A+ D     ++++ D +       +G  +  
Sbjct: 178 PFKFKFTIGDHSRFVNCVRFSPDGNRFATASADG----QIFIYDGKTGEKVCALGGSKAH 233

Query: 258 -SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              I A  +S +    L S   D+   I+ V++ S
Sbjct: 234 DGGIYAISWSPDSTHLL-SASGDKTSKIWDVNVNS 267


>gi|134055338|emb|CAK43892.1| unnamed protein product [Aspergillus niger]
          Length = 1550

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 78/236 (33%), Gaps = 27/236 (11%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G  ++       + +     SP+ + +A      + +  + L  T      +        
Sbjct: 923  GPGLQSYEGHNGRSIIGVACSPDGEVIA----SMDKVGTIILWSTVTGTIRQSFKAIHDK 978

Query: 260  ILAP---------RFSSNGKRALISVQKDEAMDIYSVD--LQSNATERLTNTLFINISAS 308
               P          FS +GK      +K+  + ++     L      R    L+ +   +
Sbjct: 979  DELPKIQPGDSKLTFSPDGKLLASVFKKESGIQLWEAPTGLLHGEIPR---HLWCHDRPA 1035

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            ++PD + ++ +        L +         +  + +         S  G ++A    +G
Sbjct: 1036 FTPDGTTVLLQDISTNPHTLGLWNIAQRAFHQTLEGQIDELLASAISHDGQIVATGSDTG 1095

Query: 369  EKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                + +         Q ++ V D ++Q+  +SP    L       G  G+K++++
Sbjct: 1096 ---ILRLWNPALNLTVQSQIKVCDGSIQSLAFSPRDDLLA---SCSGHVGAKVWNV 1145



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 53/301 (17%), Positives = 95/301 (31%), Gaps = 33/301 (10%)

Query: 134  KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
             + + +    +F +   W   +  +    Y+        F+    FVS +    +    L
Sbjct: 1165 YNGELVASCSWFGTAKLWNSTSGKLE---YELNRVRTFAFSPNGEFVSGTSDGIVRLWDL 1221

Query: 194  CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             V +RD +     + S   +   P    N   V   TYD        L D        ++
Sbjct: 1222 RVGNRD-STPFSNSNSALSVHALPGCELNS--VLSITYDGSK-----LWDIPSGTPQHQL 1273

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTN------TLFIN 304
                  I  PRFS +G+     V +   +     D  S    R   +T+        +IN
Sbjct: 1274 EALEDPIFDPRFSDDGRLIAGVVNRTVKVW----DTSSGKLIRELQITDIEDWGIDDYIN 1329

Query: 305  ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +  ++ PD   I +  D     +  V       Q   +          + S  G L+A T
Sbjct: 1330 VEIAFRPDGKIISWSLD---SLEFQVWDPFSGKQIE-TFTDSIELCSFIVSHDGHLLAVT 1385

Query: 365  KFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
               G K +I   +    +   L +   +      SP+   L       G+    L+ +  
Sbjct: 1386 --DGRKVSIR--EPSTGKHFYLEKSFESCLMMALSPNDMILATLSLSRGNLIVDLWDLPT 1441

Query: 424  N 424
            +
Sbjct: 1442 H 1442



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 53/293 (18%), Positives = 101/293 (34%), Gaps = 48/293 (16%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA--------NIRYLTPSRDQILFEPRF 219
             +   F++    +S   + G   NS+  +  DG+          ++   + +  +F+PRF
Sbjct: 1226 RDSTPFSNSNSALSVHALPGCELNSVLSITYDGSKLWDIPSGTPQHQLEALEDPIFDPRF 1285

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--------GNFRSMILAPRFSSNGKR 271
            S + + +A           V + DT   +  + +        G    + +   F  +GK 
Sbjct: 1286 SDDGRLIAGVVNRT-----VKVWDTSSGKLIRELQITDIEDWGIDDYINVEIAFRPDGK- 1339

Query: 272  ALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYV 330
             +IS   D               E  T T  I + S   S D   +     R    ++ +
Sbjct: 1340 -IISWSLDSLEFQVWDPFSGKQIE--TFTDSIELCSFIVSHDGHLLAVTDGR----KVSI 1392

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             + +      + +  E+       SP   ++A    S     + +      + R     S
Sbjct: 1393 REPSTGKHFYLEKSFESCLMM-ALSPNDMILATLSLSRGNLIVDLWDLPTHELR----SS 1447

Query: 391  NLQAPTWSPSGRSLIFSRKKDGD---TGSKLYSIDLNGRNETLINTPAYASDP 440
               A      GR + FS  +DG    TG ++Y I+ +     L++  A   DP
Sbjct: 1448 LNVA------GRKIQFS--EDGKCFCTGHEIYHIETDAEGH-LVSVAADV-DP 1490


>gi|62078997|ref|NP_001014157.1| WD repeat-containing protein 1 [Rattus norvegicus]
 gi|81910041|sp|Q5RKI0|WDR1_RAT RecName: Full=WD repeat-containing protein 1
 gi|55715677|gb|AAH85864.1| WD repeat domain 1 [Rattus norvegicus]
 gi|62721147|gb|AAX94056.1| WD repeat protein 1 [Rattus norvegicus]
          Length = 606

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 72/244 (29%), Gaps = 55/244 (22%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   +++P+   +A  + D    LR++    +          F   I    +
Sbjct: 53  IYTEHAHQVVVAKYAPSGFYIA--SGDISGKLRIWDTTQKEHILKYEYQPFAGKIKDIAW 110

Query: 266 SSNGKRALISVQK--------------------DEAMDIYSVDLQSNATERLTNTLFINI 305
           + + KR  +  +                          I SVD++ N   RL      N 
Sbjct: 111 TEDSKRIAVVGEGREKFGAVFLWDTGSSVGEITGHNKVINSVDIKQNRPYRLATGSDDNC 170

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A +             EG    +              D         +SP G+  A   
Sbjct: 171 AAFF-------------EGPPFKFKFTIG---------DHSRFVNCVRFSPDGNRFATAS 208

Query: 366 FSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G    I +      ++          D  + A +WSP    L+      GD  SK++ 
Sbjct: 209 ADG---QIFIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLL---SASGDKTSKIWD 262

Query: 421 IDLN 424
           +++N
Sbjct: 263 VNVN 266



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 72/215 (33%), Gaps = 36/215 (16%)

Query: 108 AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA-----HTI 158
           A  +V  +    G       +  + R+WD   ++ I+  ++       + IA       I
Sbjct: 58  AHQVVVAKYAPSGFYIASGDISGKLRIWDTTQKEHILKYEYQPFAGKIKDIAWTEDSKRI 117

Query: 159 S---------DDIYQSITGEK-GDFNSRILFVSESVVSGIIKNSLCVMDRD-------GA 201
           +           ++   TG   G+       ++   +       L     D       G 
Sbjct: 118 AVVGEGREKFGAVFLWDTGSSVGEITGHNKVINSVDIKQNRPYRLATGSDDNCAAFFEGP 177

Query: 202 NIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-- 257
             ++     D   F    RFSP+  + A A+ D     ++++ D +       +G  +  
Sbjct: 178 PFKFKFTIGDHSRFVNCVRFSPDGNRFATASADG----QIFIYDGKTGEKVCALGGSKAH 233

Query: 258 -SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              I A  +S +    L S   D+   I+ V++ S
Sbjct: 234 DGGIYAISWSPDSTHLL-SASGDKTSKIWDVNVNS 267


>gi|56461428|ref|YP_156709.1| dipeptidyl aminopeptidase [Idiomarina loihiensis L2TR]
 gi|56180438|gb|AAV83160.1| Dipeptidyl aminopeptidase [Idiomarina loihiensis L2TR]
          Length = 769

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 74/230 (32%), Gaps = 44/230 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDT-----------------------RIDRAPKRIG 254
           R+SP+ Q +AY   D E      +++                        RI   P   G
Sbjct: 231 RWSPDGQHIAYWQLDTEGTPVFTMINNTDELYPTLKKFPYPKVGETNAAMRIGVMPASGG 290

Query: 255 NFRSMIL--APR--------FSSNGKRALIS--VQKDEAMDIYSVDLQSNATERL----T 298
             + M +   PR        ++ N ++ LI    +K      +  D+++  ++ L    T
Sbjct: 291 QTKWMDIPGDPRQHYLVRMNWAGNSEKLLIQQLTRKQHINRAFISDIETGRSQELLREST 350

Query: 299 NTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           ++         +  D  +  + S+R G   +Y +  +      I++           + +
Sbjct: 351 DSWAEYVDDIHFLNDGREFTWLSERSGYRHIYRVHRDTGRTTAITRGNWDVVEVLRVNEE 410

Query: 358 GDLIAFTKFSGEKFA--IGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRS 403
              + F           +     DGS   ERL  +     + + S   + 
Sbjct: 411 NGWVYFIASPETPLERYLFRASLDGSGRLERLTPDMDGTHSYSISQDAKY 460


>gi|62317191|ref|YP_223044.1| WD repeat-containing protein [Brucella abortus bv. 1 str. 9-941]
 gi|83269171|ref|YP_418462.1| ATP/GTP-binding motif-containing protein [Brucella melitensis
           biovar Abortus 2308]
 gi|148558480|ref|YP_001257905.1| ATP/GTP-binding motif-containing protein [Brucella ovis ATCC 25840]
 gi|161621036|ref|YP_001594922.1| WD repeat-containing protein [Brucella canis ATCC 23365]
 gi|225629440|ref|ZP_03787473.1| WD repeat-containing protein [Brucella ceti str. Cudo]
 gi|237816751|ref|ZP_04595743.1| WD repeat-containing protein [Brucella abortus str. 2308 A]
 gi|254690693|ref|ZP_05153947.1| WD repeat-containing protein [Brucella abortus bv. 6 str. 870]
 gi|254698473|ref|ZP_05160301.1| WD repeat-containing protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|254700185|ref|ZP_05162013.1| WD repeat-containing protein [Brucella suis bv. 5 str. 513]
 gi|254703305|ref|ZP_05165133.1| WD repeat-containing protein [Brucella suis bv. 3 str. 686]
 gi|254705551|ref|ZP_05167379.1| WD repeat-containing protein [Brucella pinnipedialis M163/99/10]
 gi|254710782|ref|ZP_05172593.1| WD repeat-containing protein [Brucella pinnipedialis B2/94]
 gi|254712745|ref|ZP_05174556.1| WD repeat-containing protein [Brucella ceti M644/93/1]
 gi|254715813|ref|ZP_05177624.1| WD repeat-containing protein [Brucella ceti M13/05/1]
 gi|254731920|ref|ZP_05190498.1| WD repeat-containing protein [Brucella abortus bv. 4 str. 292]
 gi|256015748|ref|YP_003105757.1| WD-repeat family protein [Brucella microti CCM 4915]
 gi|256029165|ref|ZP_05442779.1| WD repeat-containing protein [Brucella pinnipedialis M292/94/1]
 gi|256058850|ref|ZP_05449066.1| WD repeat-containing protein [Brucella neotomae 5K33]
 gi|256157357|ref|ZP_05455275.1| WD repeat-containing protein [Brucella ceti M490/95/1]
 gi|256253663|ref|ZP_05459199.1| WD repeat-containing protein [Brucella ceti B1/94]
 gi|256255875|ref|ZP_05461411.1| WD repeat-containing protein [Brucella abortus bv. 9 str. C68]
 gi|260167742|ref|ZP_05754553.1| WD-repeat family protein [Brucella sp. F5/99]
 gi|260544430|ref|ZP_05820251.1| WD-repeat family protein [Brucella abortus NCTC 8038]
 gi|260567764|ref|ZP_05838233.1| WD-repeat family protein [Brucella suis bv. 4 str. 40]
 gi|260756269|ref|ZP_05868617.1| WD-repeat family protein [Brucella abortus bv. 6 str. 870]
 gi|260759696|ref|ZP_05872044.1| WD-repeat family protein [Brucella abortus bv. 4 str. 292]
 gi|260762937|ref|ZP_05875269.1| WD-repeat family protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882091|ref|ZP_05893705.1| WD-repeat family protein [Brucella abortus bv. 9 str. C68]
 gi|261217574|ref|ZP_05931855.1| WD-repeat family protein [Brucella ceti M13/05/1]
 gi|261220798|ref|ZP_05935079.1| WD-repeat family protein [Brucella ceti B1/94]
 gi|261312958|ref|ZP_05952155.1| WD-repeat family protein [Brucella pinnipedialis M163/99/10]
 gi|261318353|ref|ZP_05957550.1| WD-repeat family protein [Brucella pinnipedialis B2/94]
 gi|261320451|ref|ZP_05959648.1| WD-repeat family protein [Brucella ceti M644/93/1]
 gi|261322788|ref|ZP_05961985.1| WD-repeat family protein [Brucella neotomae 5K33]
 gi|261750678|ref|ZP_05994387.1| WD-repeat family protein [Brucella suis bv. 5 str. 513]
 gi|261753934|ref|ZP_05997643.1| WD-repeat family protein [Brucella suis bv. 3 str. 686]
 gi|261757176|ref|ZP_06000885.1| WD-repeat family protein [Brucella sp. F5/99]
 gi|265986152|ref|ZP_06098709.1| WD-repeat family protein [Brucella pinnipedialis M292/94/1]
 gi|265995846|ref|ZP_06108403.1| WD-repeat family protein [Brucella ceti M490/95/1]
 gi|294853943|ref|ZP_06794615.1| ATP/GTP-binding domain-containing protein-containing protein
           [Brucella sp. NVSL 07-0026]
 gi|297249243|ref|ZP_06932944.1| ATP/GTP-binding domain-containing protein-containing protein
           [Brucella abortus bv. 5 str. B3196]
 gi|62197384|gb|AAX75683.1| WD-repeat family protein [Brucella abortus bv. 1 str. 9-941]
 gi|82939445|emb|CAJ12411.1| G-protein beta WD-40 repeat:ATP/GTP-binding site motif A (P-loop)
           [Brucella melitensis biovar Abortus 2308]
 gi|148369765|gb|ABQ62637.1| G-protein beta WD-40 repeat:ATP/GTP-binding site motif A [Brucella
           ovis ATCC 25840]
 gi|161337847|gb|ABX64151.1| WD-repeat family protein [Brucella canis ATCC 23365]
 gi|225615936|gb|EEH12985.1| WD repeat-containing protein [Brucella ceti str. Cudo]
 gi|237787564|gb|EEP61780.1| WD repeat-containing protein [Brucella abortus str. 2308 A]
 gi|255998408|gb|ACU50095.1| WD-repeat family protein [Brucella microti CCM 4915]
 gi|260097701|gb|EEW81575.1| WD-repeat family protein [Brucella abortus NCTC 8038]
 gi|260154429|gb|EEW89510.1| WD-repeat family protein [Brucella suis bv. 4 str. 40]
 gi|260670014|gb|EEX56954.1| WD-repeat family protein [Brucella abortus bv. 4 str. 292]
 gi|260673358|gb|EEX60179.1| WD-repeat family protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260676377|gb|EEX63198.1| WD-repeat family protein [Brucella abortus bv. 6 str. 870]
 gi|260871619|gb|EEX78688.1| WD-repeat family protein [Brucella abortus bv. 9 str. C68]
 gi|260919382|gb|EEX86035.1| WD-repeat family protein [Brucella ceti B1/94]
 gi|260922663|gb|EEX89231.1| WD-repeat family protein [Brucella ceti M13/05/1]
 gi|261293141|gb|EEX96637.1| WD-repeat family protein [Brucella ceti M644/93/1]
 gi|261297576|gb|EEY01073.1| WD-repeat family protein [Brucella pinnipedialis B2/94]
 gi|261298768|gb|EEY02265.1| WD-repeat family protein [Brucella neotomae 5K33]
 gi|261301984|gb|EEY05481.1| WD-repeat family protein [Brucella pinnipedialis M163/99/10]
 gi|261737160|gb|EEY25156.1| WD-repeat family protein [Brucella sp. F5/99]
 gi|261740431|gb|EEY28357.1| WD-repeat family protein [Brucella suis bv. 5 str. 513]
 gi|261743687|gb|EEY31613.1| WD-repeat family protein [Brucella suis bv. 3 str. 686]
 gi|262550143|gb|EEZ06304.1| WD-repeat family protein [Brucella ceti M490/95/1]
 gi|264658349|gb|EEZ28610.1| WD-repeat family protein [Brucella pinnipedialis M292/94/1]
 gi|294819598|gb|EFG36598.1| ATP/GTP-binding domain-containing protein-containing protein
           [Brucella sp. NVSL 07-0026]
 gi|297173112|gb|EFH32476.1| ATP/GTP-binding domain-containing protein-containing protein
           [Brucella abortus bv. 5 str. B3196]
          Length = 324

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 94/281 (33%), Gaps = 28/281 (9%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           + GK   +     R +    +  +   +      + + +       V      +      
Sbjct: 55  VDGKSLVTGGEDGR-VCRIDAKGVVTELANIPRKWITAVATGPNGTVGFASGKTAWSRAA 113

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG    +    +++ +    F+P  Q++A A Y+        L+ T     P  +  ++ 
Sbjct: 114 DGKVQEFT---QERSVEGIAFAPKGQRLAIARYNG-----ATLIWTGTAAKPVEL-EWKG 164

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +   FS +G+  + S+Q++ A+  +   L+ N   R+T         S+S  +  +  
Sbjct: 165 AHIGITFSPDGRFLITSMQEN-ALHGWR--LEDNKHMRMTGYPAKVKDWSWSAKAKWLA- 220

Query: 319 ESDREGKEQLYVMQSNGSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                G     V    G D         +    ++        P G+ IA   ++     
Sbjct: 221 ---TSGAPAAIVWPFAGKDGPMGKAPLELGLRGDSMVTSVACHP-GEDIAAIGYNDG--M 274

Query: 373 IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKD 411
           I +++    +E LL       + +  W   G  L+F  +  
Sbjct: 275 ILIVRFADQKEVLLRRPGKGAITSMAWDEDGYRLVFGSQAG 315



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 28/202 (13%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----F 302
               +       +L+   + +GK  +      E   +  +D +      L N        
Sbjct: 36  DDGHQTSTVHDGLLSAAMAVDGKSLV---TGGEDGRVCRIDAK-GVVTELANIPRKWITA 91

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +    +       + F S     +  +   ++G  Q+     +E S     ++P+G  +A
Sbjct: 92  VATGPN-----GTVGFAS----GKTAWSRAADGKVQE---FTQERSVEGIAFAPKGQRLA 139

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +++G      +     ++   L         T+SP GR LI S +++   G +L    
Sbjct: 140 IARYNGATL---IWTGTAAKPVELEWKGAHIGITFSPDGRFLITSMQENALHGWRL---- 192

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            + ++  +   PA   D  W  
Sbjct: 193 EDNKHMRMTGYPAKVKDWSWSA 214


>gi|327282726|ref|XP_003226093.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Anolis carolinensis]
          Length = 890

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 77/242 (31%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     D          +  +      D +D + +       +           
Sbjct: 365 DLGNLRYWLEDPDCRDQYSVIFESGDRTTIYWNDVKDPVTIEERTRWTETYV-------- 416

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +    +   +L +         +SP   
Sbjct: 417 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQKFGHQGVQLID---------FSPCER 462

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +  +    +KR    +  A +    WS  G    F + + +
Sbjct: 463 YLVTFSPLMDTQDDPQAIIIWDTLTGQKKRGFHCESSAHWPIFKWSHDGKF--FARMTSD 520

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++   ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 521 TLSIYETPSMGLLDKKSLKIQGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPSRQEM 580

Query: 430 LI 431
            +
Sbjct: 581 RV 582



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 15/200 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 547 SWSPGGNIIAFWVPEDKDIPARVTLMQLPSRQEMRVRNLFNVVDCKLHWQKNGDYLCVKV 606

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +            +I+ +  +    + +     I I+ ++ P+ S+  F        ++
Sbjct: 607 DRTPKGTQGVVTNFEIFRMREKQVPVDVVEMKESI-IAFAWEPNGSK--FAVLHGESPRI 663

Query: 329 ---YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
              +    N    + I    +       WSPQG  +          A+  +         
Sbjct: 664 SCSFYHVKNNGKIELIKIFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDCTMMN 723

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
           + E        W P+GR +I
Sbjct: 724 IAEHYTASDVEWDPTGRYVI 743


>gi|225718556|gb|ACO15124.1| WD repeat-containing protein 82 [Caligus clemensi]
          Length = 318

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 78/199 (39%), Gaps = 30/199 (15%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ES + G +  ++ + D    N + L     + +    F P    + +A     + +++
Sbjct: 121 VDESFLPGSLDKTIRLWDLRSNNCQGLMHLAGRPVA--AFDPEG--LIFAAGIGSESVKL 176

Query: 240 YLMDTRIDRAPKRIGNFRSMILAP---------RFSSNGKRALISVQKDEAMDIYSVDLQ 290
           Y + +         G F S    P         +FS +GK  LIS        I  +D  
Sbjct: 177 YDLRSFDK------GPFSSFKFPPEKEMEWTGLKFSPDGKTILISTN---GSLIKLIDAF 227

Query: 291 SNATER----LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           S  T +     TNT  I + AS+SPD SQ V     +G+  ++  ++ GS    ++ D +
Sbjct: 228 SGQTLQTFTGHTNTKGIPLEASFSPD-SQFVISGSTDGRVHIWNAET-GSKVCVLNGDHD 285

Query: 347 ASYFDPVWSPQGDLIAFTK 365
           A      ++P    +    
Sbjct: 286 APVRCVQFNP--KYMMMAS 302



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 47/120 (39%), Gaps = 10/120 (8%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           ++F +      +    L   D+   +     P ++      +FSP+ + +  +T    + 
Sbjct: 163 LIFAAGIGSESVKLYDLRSFDKGPFSSFKFPPEKEMEWTGLKFSPDGKTILIST----NG 218

Query: 237 LRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
             + L+D    +  +      N + + L   FS +  + +IS   D  + I+  + ++ +
Sbjct: 219 SLIKLIDAFSGQTLQTFTGHTNTKGIPLEASFSPD-SQFVISGSTDGRVHIW--NAETGS 275


>gi|192290641|ref|YP_001991246.1| hypothetical protein Rpal_2250 [Rhodopseudomonas palustris TIE-1]
 gi|192284390|gb|ACF00771.1| hypothetical protein Rpal_2250 [Rhodopseudomonas palustris TIE-1]
          Length = 354

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 85/261 (32%), Gaps = 28/261 (10%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F +    V+  V  G   + + ++DR  ++   L  +     + PRFS + +++ +A 
Sbjct: 42  GGFTASPRMVAFQVPLGDEVDGIVLLDRV-SDAGRLIATNSYTHWSPRFSMDGERLVFAR 100

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS----VQKDEAMDIYS 286
                  R  L    I      +   ++ + +P    NG     +           D++ 
Sbjct: 101 QMVGSEDRELLSCETITWHCSVLFRTKAALSSPVDVQNGNVIFSTTVQRANGSRGFDVFV 160

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V  +     RLTN     +S   S   ++I F              + GS     S   +
Sbjct: 161 V-RKGQMPVRLTNYEASMLSP-ISVGGNKIAFS-------------AGGSRSLESSPCVD 205

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            +      S     I   +F      I  + +  +             P  S  G+ + F
Sbjct: 206 GNILRCDMS----EIYVLEFDPSTATI--LNRSTTLAPRFTVAGYSTMPILSGDGKRVAF 259

Query: 407 --SRKKDGDTGSKLYSIDLNG 425
             + +K+      +   DL+G
Sbjct: 260 LNTNRKESPYRYNMVVADLDG 280


>gi|17536759|ref|NP_493745.1| hypothetical protein W07E6.2 [Caenorhabditis elegans]
 gi|3886024|gb|AAC78176.1| Hypothetical protein W07E6.2 [Caenorhabditis elegans]
          Length = 473

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 69/190 (36%), Gaps = 16/190 (8%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P   + +   +FSP+ + +A  + D    +R++ ++  +     +  + +S +L   +S 
Sbjct: 102 PGHGEPVISAQFSPDGRGLASGSGD--QTMRIWDIELELPLHTCK--SHKSWVLCIAWSP 157

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP---DSSQIVFESDR 322
           +  +   S  K+  + I+  + ++     + L        S ++ P   D +  +  S  
Sbjct: 158 DATKIA-SACKNGEICIW--NAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASC- 213

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                +++  +      R      AS     W   G+ + ++        +     DG  
Sbjct: 214 GKDGNIFIWDTVQGTVVRCLSGHTASVTCLRW--GGEGLIYSGSQDRTVKMWRAD-DGVM 270

Query: 383 ERLLVEDSNL 392
            R +   ++ 
Sbjct: 271 CRNMTGHAHW 280



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 75/189 (39%), Gaps = 23/189 (12%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFI 303
           + R    I      +++ +FS +G+    S   D+ M I+ ++L+       T  +    
Sbjct: 94  VTRCSASIPGHGEPVISAQFSPDGRGLA-SGSGDQTMRIWDIELE---LPLHTCKSHKSW 149

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGD--- 359
            +  ++SPD+++I   + + G  ++ +  +   +Q   +  +   +     W P      
Sbjct: 150 VLCIAWSPDATKIA-SACKNG--EICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPT 206

Query: 360 --LIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             L+A     G  F    +   G+  R L    +++    W   G  LI+S  +  D   
Sbjct: 207 CRLLASCGKDGNIFIWDTV--QGTVVRCLSGHTASVTCLRWG--GEGLIYSGSQ--DRTV 260

Query: 417 KLYSIDLNG 425
           K++  D +G
Sbjct: 261 KMWRAD-DG 268


>gi|23500712|ref|NP_700152.1| WD repeat-containing protein [Brucella suis 1330]
 gi|23464363|gb|AAN34157.1| WD-repeat family protein [Brucella suis 1330]
          Length = 324

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 94/281 (33%), Gaps = 28/281 (9%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           + GK   +     R +    +  +   +      + + +       V      +      
Sbjct: 55  VDGKSLVTGGEDGR-VCRIDAKGVVTELANIPRKWITAVATGPNGTVGFASGKTAWSRAA 113

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG    +    +++ +    F+P  Q++A A Y+        L+ T     P  +  ++ 
Sbjct: 114 DGKVQEFT---QERSVEGIAFAPKGQRLAIARYNG-----ATLIWTGTAAKPVEL-EWKG 164

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +   FS +G+  + S+Q++ A+  +   L+ N   R+T         S+S  +  +  
Sbjct: 165 AHIGITFSPDGRFLITSMQEN-ALHGWR--LEDNKHMRMTGYPAKVKDWSWSAKAKWLA- 220

Query: 319 ESDREGKEQLYVMQSNGSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                G     V    G D         +    ++        P G+ IA   ++     
Sbjct: 221 ---TSGAPAAIVWPFAGKDGPMGKAPLELGLRGDSMVTSVACHP-GEDIAAIGYNDG--M 274

Query: 373 IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKD 411
           I +++    +E LL       + +  W   G  L+F  +  
Sbjct: 275 ILIVRFADQKEVLLRRPGKGAITSMAWDEDGYRLVFGSQAG 315



 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 28/202 (13%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----F 302
               +       +L+   + +GK  +      E   +  +D +      L N        
Sbjct: 36  DDGHQTSTVHDGLLSAAMAVDGKSLV---TGGEDGRVCRIDAK-GVVTELANIPRKWITA 91

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +    +       + F S     +  +   ++G  Q+     +E S     ++P+G  +A
Sbjct: 92  VATGPN-----GTVGFAS----GKTAWSRAADGKVQE---FTQERSVEGIAFAPKGQRLA 139

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +++G      +     ++   L         T+SP GR LI S +++   G +L    
Sbjct: 140 IARYNGATL---IWTGTAAKPVELEWKGAHIGITFSPDGRFLITSMQENALHGWRL---- 192

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            + ++  +   PA   D  W  
Sbjct: 193 EDNKHMRMTGYPAKVKDWSWSA 214


>gi|311695038|gb|ADP97911.1| conserved hypothetical protein [marine bacterium HP15]
          Length = 845

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 54/195 (27%), Gaps = 54/195 (27%)

Query: 220 SPNQQKVAYATYDDE---------DILRVYLMDTRIDRAPKRI----GNFRSMILAPRFS 266
           S +  ++ +A    E             ++  D   D   + I           +AP + 
Sbjct: 76  SHDGSRLLFAMRAPEIEDADDEDQPTWNIWEYDVSTDILRRIIDSDVTAGAGQDVAPAYL 135

Query: 267 SNGKRALISVQK------------------------DEAMDIYSVDLQSNATERLTNTLF 302
            +G R + S  +                             ++ +D      E++T    
Sbjct: 136 PDG-RIVFSSTRQRISKAVLLDEGKPQYSGLDEEGDSPGFVLHVMDDDGQNIEQITFNQS 194

Query: 303 INISASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEAS-------- 348
            ++    + D + IVF         R     LY +  +G+    +               
Sbjct: 195 HDLDPMVADDGT-IVFSRWDNAGQTRNNGVNLYRVNPDGTGLSYLFGRHSHDSVPEANDI 253

Query: 349 -YFDPVWSPQGDLIA 362
            Y  P  S  G+L+ 
Sbjct: 254 QYLQPRKSDSGNLLV 268



 Score = 36.9 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 38/127 (29%), Gaps = 40/127 (31%)

Query: 353 VWSPQGDLIAFTKFSGE----------KFAIGVMKKDGSQERLLVED------SNLQAPT 396
             S  G  + F   + E           + I          R +++           AP 
Sbjct: 74  HVSHDGSRLLFAMRAPEIEDADDEDQPTWNIWEYDVSTDILRRIIDSDVTAGAGQDVAPA 133

Query: 397 WSPSGRSLIFSRKK----------------------DGDTGSKLYSIDLNGRN-ETLINT 433
           + P GR ++FS  +                          G  L+ +D +G+N E +   
Sbjct: 134 YLPDGR-IVFSSTRQRISKAVLLDEGKPQYSGLDEEGDSPGFVLHVMDDDGQNIEQITFN 192

Query: 434 PAYASDP 440
            ++  DP
Sbjct: 193 QSHDLDP 199


>gi|302525820|ref|ZP_07278162.1| peptidase [Streptomyces sp. AA4]
 gi|302434715|gb|EFL06531.1| peptidase [Streptomyces sp. AA4]
          Length = 696

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 63/193 (32%), Gaps = 52/193 (26%)

Query: 264 RFSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNT----LFINISA--------- 307
           R + +G R L    +   D    ++S DL +    +L +                     
Sbjct: 30  RVAPDGSRVLFLRSATGTDPRHSLWSFDLATGEETKLIDAAELVSGDEDLPPEERARRER 89

Query: 308 ---------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                    ++  D +  V      GK  LY +     + + +    + S  DP  +P G
Sbjct: 90  ARETGGGVVAFGVDDAFTVVTFTLSGK--LYTLDLASGETRVLV---DGSVIDPRPNPTG 144

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------------------PTWSPS 400
             +A+ +       + +++    ++R+LV + +                       W+P 
Sbjct: 145 THVAYVRER----RLHMIELATGEDRVLVGEDDEHVTWGLAEFIAGEEMDRTRGYWWAPD 200

Query: 401 GRSLIFSRKKDGD 413
           GRS++  R   G 
Sbjct: 201 GRSVLVERADRGP 213



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 77/227 (33%), Gaps = 37/227 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++P+ + V     D   + R  + D    + P  +  + S       S N + +L  + 
Sbjct: 196 WWAPDGRSVLVERADRGPVPRWTIGDPANPQQPANVVAYPS-----AGSPNAEVSLAVLG 250

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGS 336
            D +     VD++    E L       ++  +S     ++    R+ K   +  +  +  
Sbjct: 251 LDGS----RVDVEKGDWEYL-------VTVHWSAGGQPLLAVQPRDQKRLTVLALDPSDG 299

Query: 337 DQKRISQDKEASY-----FDPVWSPQGDLIAFTKFSGEKFAI---GVMKKDGSQERLLVE 388
               +  + +  +       P W+  G L+  +   G+   +     +   G Q R+++ 
Sbjct: 300 SVAEVHTETDEHWVEIYQGVPAWTADGKLVVESAADGDHRLLVDGKAVTPPGMQLRMVLH 359

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
             +            ++F+  +D  T   LY  +  G    L  T  
Sbjct: 360 VGDE-----------ILFTASEDDPTQIHLYRTEG-GAVRRLSTTDG 394


>gi|78067133|ref|YP_369902.1| 3-carboxymuconate cyclase-like [Burkholderia sp. 383]
 gi|77967878|gb|ABB09258.1| 3-carboxymuconate cyclase-like protein [Burkholderia sp. 383]
          Length = 414

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/326 (14%), Positives = 98/326 (30%), Gaps = 30/326 (9%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ-IIGKKFFSSPASWRKIAHTISDDIYQS 165
           G   L+ G     G D + V +R +D K      +      +P+         +      
Sbjct: 50  GVYNLLVGTYTGGGSDGIYV-YR-FDTKTGSVAPVSSAKTVNPSYLLPSRDGRTVYAVNE 107

Query: 166 ITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFS--- 220
           + G+ G   +R    +          + +  +  +G +  YL  S D   L    +S   
Sbjct: 108 LPGDDGPATTRGGVSAFRFDAKTGALSFIDRVSSEGNDPCYLALSPDGKYLVTANYSVAK 167

Query: 221 -PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            P      +   DD  + +  L        P +     + + +  FS +G+   +     
Sbjct: 168 DPGGSFAVFPLRDDGAVGQAALTVHHEGTGPVKGRQDGAHVHSTVFSPDGRYLFVQDLGA 227

Query: 280 EAMDIYSVDLQSN------ATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLY-- 329
           + +  Y   +  +         R T            +S D       S+     +++  
Sbjct: 228 DKIYGYRYTVDGSRGLISPTETRYTPVKAGSGPRHMVFSADGRYAYVTSELNASVEVFGY 287

Query: 330 ----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI---GVMKKDGSQ 382
               +               +        SP G  + +    G+   +    V + DG  
Sbjct: 288 HDGKLTPVETVSMTAPGFKGKVGGGAIHLSPDGRFL-YVSNRGDANDLVIYAVNQGDGRL 346

Query: 383 ERLLVEDSNLQAPT---WSPSGRSLI 405
           +++  + S  + P      P+G+ LI
Sbjct: 347 KQVGRQSSLGKTPREFLIDPTGKWLI 372



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 62/206 (30%), Gaps = 45/206 (21%)

Query: 264 RFSSNGKRAL---ISVQKDEAMDIYSVDL---------------QSNATERLTNTLFINI 305
             S +GK  +    SV KD         L               +     +         
Sbjct: 150 ALSPDGKYLVTANYSVAKDPGGSFAVFPLRDDGAVGQAALTVHHEGTGPVKGRQDGAHVH 209

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---------VWSP 356
           S  +SPD   + F  D  G +++Y  +      + +    E  Y            V+S 
Sbjct: 210 STVFSPDGRYL-FVQD-LGADKIYGYRYTVDGSRGLISPTETRYTPVKAGSGPRHMVFSA 267

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-----------SPSGRSLI 405
            G     T        +     DG      VE  ++ AP +           SP GR L 
Sbjct: 268 DGRYAYVTSELNASVEVFGYH-DGKLT--PVETVSMTAPGFKGKVGGGAIHLSPDGRFL- 323

Query: 406 FSRKKDGDTGSKLYSID-LNGRNETL 430
           +   +       +Y+++  +GR + +
Sbjct: 324 YVSNRGDANDLVIYAVNQGDGRLKQV 349


>gi|254696002|ref|ZP_05157830.1| WD repeat-containing protein [Brucella abortus bv. 3 str. Tulya]
 gi|261216429|ref|ZP_05930710.1| WD-repeat family protein [Brucella abortus bv. 3 str. Tulya]
 gi|260918036|gb|EEX84897.1| WD-repeat family protein [Brucella abortus bv. 3 str. Tulya]
          Length = 324

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 94/281 (33%), Gaps = 28/281 (9%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           + GK   +     R +    +  +   +      + + +       V      +      
Sbjct: 55  VDGKSLVTGGEDGR-VCRIDAKGVVTELANIPRKWITAVATGPNGTVGFASGKTAWSRAA 113

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG    +    +++ +    F+P  Q++A A Y+        L+ T     P  +  ++ 
Sbjct: 114 DGKVQEFT---QERSVEGIAFAPKGQRLAIARYNG-----ATLIWTGTAAKPVEL-EWKG 164

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +   FS +G+  + S+Q++ A+  +   L+ N   R+T         S+S  +  +  
Sbjct: 165 AHIGITFSPDGRFLITSMQEN-ALHGWR--LEDNKHMRMTGYPAKVKDWSWSAKAKWLA- 220

Query: 319 ESDREGKEQLYVMQSNGSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                G     V    G D         +    ++        P G+ IA   ++     
Sbjct: 221 ---TSGAPAAIVWPFAGKDGPMGKAPLELGLRGDSMVTSVACHP-GEDIAAIGYNDG--M 274

Query: 373 IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKD 411
           I +++    +E LL       + +  W   G  L+F  +  
Sbjct: 275 ILIVRFADQKEVLLRRPGKGAITSMAWDEDGYRLVFGSQAG 315



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 28/202 (13%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----F 302
               +       +L+   + +GK  +      E   +  +D +      L N        
Sbjct: 36  DDGHQTSTVHDGLLSAAMAVDGKSLV---TGGEDGRVCRIDAKG-VVTELANIPRKWITA 91

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +    +       + F S     +  +   ++G  Q+     +E S     ++P+G  +A
Sbjct: 92  VATGPN-----GTVGFAS----GKTAWSRAADGKVQE---FTQERSVEGIAFAPKGQRLA 139

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +++G      +     ++   L         T+SP GR LI S +++   G +L    
Sbjct: 140 IARYNGATL---IWTGTAAKPVELEWKGAHIGITFSPDGRFLITSMQENALHGWRL---- 192

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            + ++  +   PA   D  W  
Sbjct: 193 EDNKHMRMTGYPAKVKDWSWSA 214


>gi|223995029|ref|XP_002287198.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976314|gb|EED94641.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 1043

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 50/227 (22%), Positives = 87/227 (38%), Gaps = 28/227 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISV 276
           ++ P  Q +A +      +  V + +T   R PK      +S +LA  FS NGK   +  
Sbjct: 696 KWHPKDQYLAIS----GQLKNVVVYETSCRRLPKGMCLRSKSTVLAVEFSPNGKIIAV-- 749

Query: 277 QKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDRE---------G 324
             +E   +   D  S A   L      +  +I+  +S     +   S            G
Sbjct: 750 -GNETGLVTFFDATSTAFVTLFETVIGVGKDITIQWSSSGRNVAIASGSTFVLFDTIFCG 808

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           K  ++   S+    +++ Q    ++    +SP+GD IA T        I   K D S  R
Sbjct: 809 KVGVHPASSSRFLVRKVIQGG-VNFTSLAFSPKGDYIALTDDQTRILNI---KDDCSCVR 864

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +L +  N+ +  WSP G +     K+D      +Y    + +   L+
Sbjct: 865 VL-DQQNVLSSGWSPDGAAFALVGKRD---NLSIYDSRSSSKEWKLL 907


>gi|197123192|ref|YP_002135143.1| hypothetical protein AnaeK_2789 [Anaeromyxobacter sp. K]
 gi|196173041|gb|ACG74014.1| conserved hypothetical protein [Anaeromyxobacter sp. K]
          Length = 532

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 82/245 (33%), Gaps = 31/245 (12%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L ++   G + R +  +   +     +SP    +A     +    R  L+  R   A
Sbjct: 88  SCDLRLVPAAGGDARRVAGAVTTLPHGLLWSPAGATLAALGEYEYPTARGTLVVVRAGGA 147

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINIS 306
           P+ +G     +    F+   +  L     D  +    V       E    L     +   
Sbjct: 148 PRTLGT---AVSFAGFAPGTEDLLFVA--DGRL---LVSRGGGEPEPVAGLDRVGSLEPG 199

Query: 307 ASYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +S  +   +    R+G      L V+ ++G  ++   +  +        +P G   A+
Sbjct: 200 PGWSGGAGPALLV--RQGASAGAALSVVGADGRARRVAERSGDY-----AIAPGGAY-AY 251

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK----KDGDTGSKLY 419
           T   G  +A+ +     +  R  V    +QA  +S  GR++ F       K GD    L 
Sbjct: 252 TVQDGGGYALHL-----AGPRQAVLGKEVQAFAFSRDGRAIAFLADATPGKQGDLHLALV 306

Query: 420 SIDLN 424
           +   +
Sbjct: 307 AKPGD 311



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 33/225 (14%), Positives = 71/225 (31%), Gaps = 29/225 (12%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V+  DG   R    S D  +            AY   D      ++L   R     K 
Sbjct: 222 LSVVGADGRARRVAERSGDYAIAP------GGAYAYTVQD-GGGYALHLAGPRQAVLGKE 274

Query: 253 IGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +  F        FS +G+           +  D++   +       L   +       ++
Sbjct: 275 VQAF-------AFSRDGRAIAFLADATPGKQGDLHLALVAKPGDAVLAREVG---ELRWA 324

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGE 369
             + ++ +    + + +     + G D    +    A+  D   S  G  +AF    +  
Sbjct: 325 QRAPRLAWLERFDARVRSGTAGAGGLDLPSRTYG--ANVTDLELSADGKRLAFLQHTTRG 382

Query: 370 KFAIGVMKKD-----GSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            +++ +M        G+    + + +     ++SP  R L +  +
Sbjct: 383 GYSVDLMLAQLDAPPGTAAVQVAQGAF--GFSFSPDARWLYYRTR 425



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 53/169 (31%), Gaps = 15/169 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALI---S 275
           S + +++A+  +       V LM  ++D  P               FS + +        
Sbjct: 367 SADGKRLAFLQHTTRGGYSVDLMLAQLDAPPGTAAVQVAQGAFGFSFSPDARWLYYRTRC 426

Query: 276 VQKDEAMDIYSVDLQ----SNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYV 330
           V+  E  D+  V  +        ER+               D  +++    R  ++ L V
Sbjct: 427 VRNGEGCDVERVPAEGLAPGAKPERVAEGAKSFEYDPR---DPGRLLVTWQRMDRDALDV 483

Query: 331 -MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +  +G   +  +     S    +  P    +A+     ++    V + 
Sbjct: 484 GVWKDGKLTRVDTYVLPGS--AQLVGPDSRRLAYAVLHEKRQGAYVAEL 530


>gi|149631401|ref|XP_001513489.1| PREDICTED: hypothetical protein, partial [Ornithorhynchus anatinus]
          Length = 212

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 51/141 (36%), Gaps = 11/141 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  ++  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 76  AFSPDSQFLATGSHVGK----VNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 130

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  ++I+  D+ +      L        S ++SPDS  +V  SD      + +     +
Sbjct: 131 IDGIINIF--DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHA 185

Query: 337 DQKRISQDKEASYFDPVWSPQ 357
           +         +   +  + P 
Sbjct: 186 NLAGTLSGHASWVLNVAFCPD 206



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 71/208 (34%), Gaps = 37/208 (17%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           TG +       L    RLWD+++ KQI  K   + P                        
Sbjct: 38  TGAI--AASSSLDAHIRLWDLENGKQI--KSIDAGPVD-----------------AWSLA 76

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F+    F++    +G     + +   +     Y   +R + +    +SP+ + +A    D
Sbjct: 77  FSPDSQFLA----TGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAID 132

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DL 289
                 + + D    +    +      I +  FS +  + L++   D  + IY V   +L
Sbjct: 133 G----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKIYDVQHANL 187

Query: 290 QSNATERLTNTLFINISASYSPDSSQIV 317
                  L+      ++ ++ PD +  V
Sbjct: 188 AGT----LSGHASWVLNVAFCPDDTHFV 211



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 56/152 (36%), Gaps = 12/152 (7%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S   D  + ++ ++      + +        S ++SPDS  +       GK  ++ +
Sbjct: 41  IAASSSLDAHIRLWDLE-NGKQIKSIDAGPVDAWSLAFSPDSQFLA-TGSHVGKVNIFGV 98

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           ++   +    ++ K        +SP G  +A     G    I +      +    +E   
Sbjct: 99  ETGKKEYSLDTRGKF--ILSIAYSPDGKYLASGAIDG---IINIFDIATGKLLHTLEGHA 153

Query: 392 L--QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +  ++ T+SP  + L+ +     D   K+Y +
Sbjct: 154 MPIRSLTFSPDSQLLVTASD---DGYIKIYDV 182


>gi|157872022|ref|XP_001684560.1| activated protein kinase c receptor (LACK); guanine
           nucleotide-binding protein beta subunit-like protein
           [Leishmania major]
 gi|157872024|ref|XP_001684561.1| activated protein kinase c receptor (LACK); guanine
           nucleotide-binding protein beta subunit-like protein
           [Leishmania major]
 gi|68127629|emb|CAJ05732.1| activated protein kinase c receptor (LACK) [Leishmania major strain
           Friedlin]
 gi|68127630|emb|CAJ05733.1| activated protein kinase c receptor (LACK) [Leishmania major strain
           Friedlin]
          Length = 312

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 12/167 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + D R  +  ++       +LA  FS +  R ++S  +D  + +++V  +       
Sbjct: 88  SIRMWDLRNGQCQRKFLKHTKDVLAVAFSPD-DRLIVSAGRDNVIRVWNVAGECMHEFLR 146

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S  +SP     +  S       + V   NG   +R  +           SP 
Sbjct: 147 DGHEDWVSSICFSPSLEHPIVVSG-SWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPD 205

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPS 400
           G L A     G+  A  +      +   L +  N+++P     +SP+
Sbjct: 206 GSLCA---SGGKDGAALLWDLSTGE--QLFK-INVESPINQIAFSPN 246



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 17/163 (10%)

Query: 163 YQSITGEKGDFNSRILFV----SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           ++ +     D+ S I F        VVSG   N++ V + +G             +    
Sbjct: 142 HEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVT 201

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+    A             L D        +I N  S I    FS N     ++ ++
Sbjct: 202 VSPDGSLCA----SGGKDGAALLWDLSTGEQLFKI-NVESPINQIAFSPNRFWMCVATER 256

Query: 279 DEAMDIYSVDLQSNATE-RLTNT---LFINISASYSPDSSQIV 317
                +   DL+S A    LT         IS ++S D + + 
Sbjct: 257 S----LSVYDLESKAVIAELTPDGAKPSECISIAWSADGNTLY 295


>gi|242089099|ref|XP_002440382.1| hypothetical protein SORBIDRAFT_09g030800 [Sorghum bicolor]
 gi|241945667|gb|EES18812.1| hypothetical protein SORBIDRAFT_09g030800 [Sorghum bicolor]
          Length = 479

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 64/155 (41%), Gaps = 13/155 (8%)

Query: 182 ESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    ++ + +       +       +++    FSP+ Q +A A++D      V 
Sbjct: 336 ERLVSGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDK----SVK 391

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTN 299
           L +    +         + +    +S++  R L+S  KD  + I+  D++++  +  L  
Sbjct: 392 LWNGITGKFVAAFRGHVADVYQISWSAD-SRLLLSGSKDSTLKIW--DIRTHKLKMDLPG 448

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                 +  +SPD  ++       GK+++  +  N
Sbjct: 449 HADEVYTVDWSPDGEKVA----SGGKDRVLKLWMN 479



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 56/166 (33%), Gaps = 23/166 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A  + D      V   D             ++ +L   +S +GK+ + S  
Sbjct: 121 SFSPDGKSLASGSGDT----NVRFWDLSTQTPLFTCKGHKNWVLCIAWSPDGKQLV-SGS 175

Query: 278 KDEAMDIYSVDLQSNAT--ERLTNTLFINISASY------SPDSSQIVFES-DREGKEQL 328
           K   + ++  D ++       L        + S+      SP      F S  ++G  ++
Sbjct: 176 KSGELILW--DPKTGNQLGTPLMGHRKWITAVSWEPVHLQSPCRR---FVSASKDGDARI 230

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +    + + +K I      +         GD + +T        + 
Sbjct: 231 W----DVTTRKCIISLTGHTSSVTCVKWGGDGLIYTGSQDCLIKVW 272



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/268 (12%), Positives = 81/268 (30%), Gaps = 50/268 (18%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +S+ SG    ++   D       +        +    +SP+ +++   +   +    +  
Sbjct: 127 KSLASGSGDTNVRFWDLSTQTPLFTCKGHKNWVLCIAWSPDGKQLVSGS---KSGELILW 183

Query: 242 MDTRIDRAPKRIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNA-T 294
                ++    +   R  I A  +      S    R  +S  KD    I+  D+ +    
Sbjct: 184 DPKTGNQLGTPLMGHRKWITAVSWEPVHLQSP--CRRFVSASKDGDARIW--DVTTRKCI 239

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDRE----------G------KEQLYVMQSNGSDQ 338
             LT          +  D   +++   ++          G      K   + + S     
Sbjct: 240 ISLTGHTSSVTCVKWGGDG--LIYTGSQDCLIKVWETSQGKLVKTLKGHGHWVNSLALST 297

Query: 339 KRISQDKEASYFDPVWS-----PQGDLIAFTKFSGE----------KFAIGVMKKDGSQE 383
           + + +     +    +S      +  L+ + K  G            F + + +   S++
Sbjct: 298 EYVLRTGAYDHTGKTFSTAEEMKEAALVRYKKMRGNAPERLVSGSDDFTMFLWEPTISKQ 357

Query: 384 ---RLLVEDSNLQAPTWSPSGRSLIFSR 408
              R+      +    +SP G+ L  + 
Sbjct: 358 PKARMTGHQKLVNHVYFSPDGQWLASAS 385



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 44/154 (28%), Gaps = 19/154 (12%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++   +      R+T    +     +SPD   +   S     + + +  
Sbjct: 338 LVSGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASF---DKSVKLWN 394

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGV----MKKDGSQERLL 386
                     +   A  +   WS    L+           + I      M   G  + + 
Sbjct: 395 GITGKFVAAFRGHVADVYQISWSADSRLLLSGSKDSTLKIWDIRTHKLKMDLPGHADEVY 454

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             D       WSP G  +        D   KL+ 
Sbjct: 455 TVD-------WSPDGEKVA---SGGKDRVLKLWM 478



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 55/175 (31%), Gaps = 20/175 (11%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           ++R    I      ++A  FS +GK    S   D  +  + +   S  T   T     N 
Sbjct: 103 VNRCSATIAGHTEAVIAVSFSPDGKSLA-SGSGDTNVRFWDL---STQTPLFTCKGHKNW 158

Query: 306 SA--SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVW------SP 356
               ++SPD  Q+V  S      +L +      +Q          +     W      SP
Sbjct: 159 VLCIAWSPDGKQLVSGSKSG---ELILWDPKTGNQLGTPLMGHRKWITAVSWEPVHLQSP 215

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
               +  +        I  +        L    S++    W   G  LI++  +D
Sbjct: 216 CRRFV--SASKDGDARIWDVTTRKCIISLTGHTSSVTCVKWGGDG--LIYTGSQD 266


>gi|221101414|ref|XP_002155584.1| PREDICTED: similar to Eukaryotic translation initiation factor 3,
           subunit B [Hydra magnipapillata]
          Length = 695

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 82/251 (32%), Gaps = 37/251 (14%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N++      D        + N ++V            +   D   +           
Sbjct: 169 DFGNLKSWLLEPDSNDQYSMMTGNGERVVILQNGPTAPTVIKQRDNWTESYVM------- 221

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIV 317
                 +S  G       ++   +             R+      N+S   +SP    +V
Sbjct: 222 ------WSPKGTYMATIHKQGVVLW------GGEEFARINRFNHTNVSLIDFSPCERYLV 269

Query: 318 -FESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            F ++    ++   + +       +KR       ++    WSP G ++A  + +GE  +I
Sbjct: 270 TFSANHMNNQEPQAIVIWDILTGMKKR-DFVAGGTWPVFKWSPDGSMVA--RSNGENLSI 326

Query: 374 GVMKKDGSQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                  S   +L+E  +++ P     +WSP    + +   +D DT ++L  + L  + E
Sbjct: 327 Y-----ESPNFVLLEKKSIKIPGLMDFSWSPKQNIIAYWVPEDKDTPARLCIMHLPSKKE 381

Query: 429 TLINTPAYASD 439
             +       D
Sbjct: 382 IRVKNLFNVQD 392



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 58/202 (28%), Gaps = 17/202 (8%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +   +A     D  +   + T      KR+ N    + +     +       +  +    
Sbjct: 137 KNHTFAVNSFNDFEKYKDISTDWVPPEKRVFNDFGNLKSWLLEPDSNDQYSMMTGNGERV 196

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +   +  +  T       +      +SP  + +     ++G     V+   G +  RI++
Sbjct: 197 VILQNGPTAPTVIKQRDNWTESYVMWSPKGTYMA-TIHKQG-----VVLWGGEEFARINR 250

Query: 344 DKEASYFDPVWSPQGDLIA------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
               +     +SP    +             +   I  +   G ++R  V         W
Sbjct: 251 FNHTNVSLIDFSPCERYLVTFSANHMNNQEPQAIVIWDI-LTGMKKRDFVAGGTWPVFKW 309

Query: 398 SPSGRSLIFSRKKDGDTGSKLY 419
           SP G  +     +       +Y
Sbjct: 310 SPDGSMVA----RSNGENLSIY 327


>gi|254515945|ref|ZP_05128005.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
 gi|219675667|gb|EED32033.1| conserved hypothetical protein [gamma proteobacterium NOR5-3]
          Length = 285

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 70/205 (34%), Gaps = 9/205 (4%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           DT    +P+ I         P F+ +G   +    +    DI+  +  +  + R+T T  
Sbjct: 34  DTLRAESPRNITQRPGYDNQPSFTPDGD-LMFVQMEGGRTDIWRWNSAAERSTRVTATPN 92

Query: 303 I-NISASYSPDSSQ--IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               S +  P +        S  +   +L+     G+  + I            W    D
Sbjct: 93  QGEYSPTPIPGTESGISYIRSPDDSSGRLWRTPQEGATAE-IIFADIGPVGYHAW-FDAD 150

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +A  +       + +++      R +         +  P+ R++ F+R  D  T  +++
Sbjct: 151 YVALWRLQDPSL-LQLVELQTQATRTIATAVGRSPQSV-PNRRAVSFTRTTDSGTLIEIH 208

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +DLN R + L   P       W  
Sbjct: 209 DLDLN-RTDALTVLPEGGEFHAWTP 232


>gi|169595722|ref|XP_001791285.1| hypothetical protein SNOG_00604 [Phaeosphaeria nodorum SN15]
 gi|111070979|gb|EAT92099.1| hypothetical protein SNOG_00604 [Phaeosphaeria nodorum SN15]
          Length = 719

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 55/172 (31%), Gaps = 26/172 (15%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T   +   S   +  +    F  +   K  L  M    +  +   Q   +   D   SP
Sbjct: 187 ITQERYSVFSGCLAGGNGSYAFTGEM--KNLLNGMNYTVTRPESPVQGSSSDPGDYDLSP 244

Query: 357 QGDLIAFTKFSGEKFA-------IGVMKKDGSQERLL----------VEDSNLQAPTWSP 399
            G  +AF   + E          I ++  DGSQ  +                   PTWS 
Sbjct: 245 DGSTVAFRTKAPELAKANYTASYIYIVPHDGSQVAVPINGPGTTAPETAQGASGYPTWSH 304

Query: 400 SGRSLIFSRKKD---GDTGSKLYSIDLNGRNETLINTP-AYASDP---QWVG 444
             + + + ++          KLY  +++G N  + +    + S P    W  
Sbjct: 305 DSKKIAYGQQDGIFYESDRYKLYIAEIDGLNSKIRSVAEDWDSAPSGLSWSP 356



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 75/229 (32%), Gaps = 29/229 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE------DILRV 239
           +G +KN L  M+                  +   SP+   VA+ T   E          +
Sbjct: 209 TGEMKNLLNGMNYTVTRPESPVQGSSSDPGDYDLSPDGSTVAFRTKAPELAKANYTASYI 268

Query: 240 YLMDTRIDRAPKRI--------GNFRSMILAPRFSSNGKRALISVQKD-----EAMDIYS 286
           Y++     +    I           +     P +S + K+     Q       +   +Y 
Sbjct: 269 YIVPHDGSQVAVPINGPGTTAPETAQGASGYPTWSHDSKKIAYGQQDGIFYESDRYKLYI 328

Query: 287 VDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGS---DQKR 340
            ++    ++  +     + +    S+SPD S +   S+     +L+++  + +       
Sbjct: 329 AEIDGLNSKIRSVAEDWDSAPSGLSWSPDDSDLWVISELHASVRLWIIPQDAAADFKPVN 388

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVE 388
           I+   + +  D    P G   AF   +      I   ++ G  +++L  
Sbjct: 389 IT-GPDTTLSDFAVLPDGS--AFVSAASSWSSRIFYSQQPGQDKKILFT 434



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 60/179 (33%), Gaps = 20/179 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRD--------QILFEPRFSPNQQKVAYATYD----- 232
           +    + + ++  DG+ +                     P +S + +K+AY   D     
Sbjct: 261 ANYTASYIYIVPHDGSQVAVPINGPGTTAPETAQGASGYPTWSHDSKKIAYGQQDGIFYE 320

Query: 233 -DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D   L +  +D    +      ++ S      +S +     +  +   ++ ++ +   +
Sbjct: 321 SDRYKLYIAEIDGLNSKIRSVAEDWDSAPSGLSWSPDDSDLWVISELHASVRLWIIPQDA 380

Query: 292 NATERLTNTLFINISAS---YSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKE 346
            A  +  N    + + S     PD S   F S       +++  Q  G D+K +    E
Sbjct: 381 AADFKPVNITGPDTTLSDFAVLPDGS--AFVSAASSWSSRIFYSQQPGQDKKILFTANE 437


>gi|94495343|ref|ZP_01301924.1| prolyl oligopeptidase family protein, putative [Sphingomonas sp.
           SKA58]
 gi|94425609|gb|EAT10629.1| prolyl oligopeptidase family protein, putative [Sphingomonas sp.
           SKA58]
          Length = 693

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 51/168 (30%), Gaps = 32/168 (19%)

Query: 264 RFSSNGKRALISVQK------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             S +G+R  + V++           I  VD          N+  I+           + 
Sbjct: 66  TLSPDGRRVAVGVRRASVAGDSYCTGITLVDRDG-------NSKLIDSGP-------GVA 111

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F    +     Y      S   ++          P WS  G  +A+ KF   +  + +  
Sbjct: 112 FFRFED----FYGTNGFPSGITQL--------ITPRWSGDGKRLAYLKFIDGRLQLRLWD 159

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +      +  +  ++    +S  G  +I+  +      + L     +G
Sbjct: 160 EQLKARTIGADPQDIVDFRFSRDGSMIIYKVRDGSAQATALLRESRSG 207



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 65/183 (35%), Gaps = 25/183 (13%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA-----HTISDD 161
            AQ    G         L       D+     +    FF+     R++A      +++ D
Sbjct: 33  NAQA---GSTRPISDRDL---IETLDLGPNAAMESGSFFTLSPDGRRVAVGVRRASVAGD 86

Query: 162 IY-QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            Y   IT    D NS+++       SG         D  G N     PS    L  PR+S
Sbjct: 87  SYCTGITLVDRDGNSKLI------DSGPGVAFFRFEDFYGTNG---FPSGITQLITPRWS 137

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + +++AY  + D    R+ L         + IG     I+  RFS +G   +  V +D 
Sbjct: 138 GDGKRLAYLKFIDG---RLQLRLWDEQLKARTIGADPQDIVDFRFSRDGSMIIYKV-RDG 193

Query: 281 AMD 283
           +  
Sbjct: 194 SAQ 196



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 49/164 (29%), Gaps = 28/164 (17%)

Query: 220 SPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRIGNFRSMIL--------------- 261
           SP+ ++VA          D     +     D   K I +   +                 
Sbjct: 68  SPDGRRVAVGVRRASVAGDSYCTGITLVDRDGNSKLIDSGPGVAFFRFEDFYGTNGFPSG 127

Query: 262 -----APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                 PR+S +GKR       D  + +   D Q  A   +       +   +S D S I
Sbjct: 128 ITQLITPRWSGDGKRLAYLKFIDGRLQLRLWDEQLKART-IGADPQDIVDFRFSRDGSMI 186

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGD 359
           ++   R+G  Q   +      +  +  D     F   W  P G 
Sbjct: 187 IY-KVRDGSAQATALLRE--SRSGLHYDDRYFPFASAWPFPGGR 227


>gi|146092534|ref|XP_001470320.1| activated protein kinase c receptor (LACK); p36 LACK protein;
           guanine nucleotide-binding protein beta subunit-like
           protein [Leishmania infantum]
 gi|51317307|sp|P62883|GBLP_LEICH RecName: Full=Guanine nucleotide-binding protein subunit beta-like
           protein; AltName: Full=Antigen LACK
 gi|51317308|sp|P62884|GBLP_LEIIN RecName: Full=Guanine nucleotide-binding protein subunit beta-like
           protein; AltName: Full=Antigen LACK; AltName:
           Full=LiP36; AltName: Full=p36Li
 gi|13991854|gb|AAK51527.1|AF363974_1 p36 LACK protein [Leishmania donovani]
 gi|1213339|gb|AAA91208.1| LiP36 [Leishmania infantum]
 gi|1276475|gb|AAA97576.1| LACK [Leishmania chagasi]
 gi|20521159|dbj|BAB91559.1| LACK [Leishmania donovani]
 gi|321398491|emb|CAM69514.2| activated protein kinase c receptor (LACK) [Leishmania infantum
           JPCM5]
 gi|321398493|emb|CAM69516.2| activated protein kinase c receptor (LACK) [Leishmania infantum
           JPCM5]
 gi|322500623|emb|CBZ35700.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 312

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 12/167 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + D R  +  ++       +LA  FS +  R ++S  +D  + +++V  +       
Sbjct: 88  SIRMWDLRNGQCQRKFLKHTKDVLAVAFSPD-DRLIVSAGRDNVIRVWNVAGECMHEFLR 146

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S  +SP     +  S       + V   NG   +R  +           SP 
Sbjct: 147 DGHEDWVSSICFSPSLEHPIVVSG-SWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPD 205

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPS 400
           G L A     G+  A  +      +   L +  N+++P     +SP+
Sbjct: 206 GSLCA---SGGKDGAALLWDLSTGE--QLFK-INVESPINQIAFSPN 246



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 17/163 (10%)

Query: 163 YQSITGEKGDFNSRILFV----SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           ++ +     D+ S I F        VVSG   N++ V + +G             +    
Sbjct: 142 HEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVT 201

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+    A             L D        +I N  S I    FS N     ++ ++
Sbjct: 202 VSPDGSLCA----SGGKDGAALLWDLSTGEQLFKI-NVESPINQIAFSPNRFWMCVATER 256

Query: 279 DEAMDIYSVDLQSNATE-RLTNT---LFINISASYSPDSSQIV 317
                +   DL+S A    LT         IS ++S D + + 
Sbjct: 257 S----LSVYDLESKAVIAELTPDGAKPSECISIAWSADGNTLY 295


>gi|324997920|ref|ZP_08119032.1| hypothetical protein PseP1_04104 [Pseudonocardia sp. P1]
          Length = 524

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 84/265 (31%), Gaps = 18/265 (6%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           + + ++      L +    G  +  L     +I       P+    A       D   ++
Sbjct: 33  ASNGIAFGPDGRLWIAQFLGGTVGALDLGTGEIETV--LGPDGPLTAPDDLVFGDGGELF 90

Query: 241 LMDTRIDRAPKRIGNFRSMILA-PRFSSNG----KRALISVQKDEAMDIYSVDLQSNATE 295
           ++D       +R  +  + ++A    + +G    +  L   +      +  +DL      
Sbjct: 91  VVDLPAGLVWRRDPDGATTVVADGIVAPDGIAWHRGRLFVNELVPEGRLLEIDLAGGPPR 150

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L + L +  +    PD   + +     G  +++ +  +G   +R+    +       + 
Sbjct: 151 VLADDLALGNAMQVGPDG-LLYYPHLLSG--EVWRVDPDGGTPERVLAGLDRPV-AVRFD 206

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P G L   +  +GE+  +     DG    L           ++P G     +    G   
Sbjct: 207 PAGRLRILS--NGERGTLWTHDGDGPLRELHTGVGGADNVAFAPDG-----TAYVSGAFH 259

Query: 416 SKLYSIDLNGRNETLINTPAYASDP 440
             ++++D  G    ++         
Sbjct: 260 GGVHAVDPAGTVRVIVPEGLNGPFG 284


>gi|256425882|ref|YP_003126535.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256040790|gb|ACU64334.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 630

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 77/263 (29%), Gaps = 39/263 (14%)

Query: 177 ILFVSESVVSGIIKNSLCVMDR-------DGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           ++F       G     +    R       D  N+     +R     +P  S ++Q + +A
Sbjct: 236 LVFTGCDFPGGRGSCDIYYTIRTEEGLWVDPMNLGSPINTR-AWESQPSLSADKQTLYFA 294

Query: 230 TYDDEDILRVYL---MDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISVQKD---E 280
               +    +++           P+R+    N       P    + +    S        
Sbjct: 295 RETQDAGSDIFMSKMQPNGKWGYPERLDSNINTTGREATPFIHPDNQTLYFSSNGHQGFG 354

Query: 281 AMDIYSV----DLQSNATERL---TNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQ 332
            MDI+      D        L    NT   + S   + D     F SDR + + QL +  
Sbjct: 355 DMDIFVSRRQPDGSWGPAVNLGYPINTADEDASLIVAADGKTAYFASDRSDSRGQLDLYS 414

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--- 389
                + R  +    S F      Q  LIA          I        Q    +     
Sbjct: 415 FELYPEVRPLKTLYVSGFVYDAKTQKRLIA---------NIETYDLSTGQVAATIRTDKV 465

Query: 390 SNLQAPTWSPSGRSLIFSRKKDG 412
            N  AP   P+G+   FS  + G
Sbjct: 466 GNFMAP--LPTGKDYAFSVNRKG 486



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 49/319 (15%), Positives = 95/319 (29%), Gaps = 65/319 (20%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNS----------------LCVMDRDGANIRYL 206
           Y      +G F   +  V+    +G  ++                    +     N+   
Sbjct: 106 YSKALAGEGRFADALTAVTIYSQTGKTRSEKAEALIRTYTFAAKAAAKPVPFKPKNLGDS 165

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL---MDTRIDRAPKRIG---NFRSMI 260
             S+D   + P  + + + + +    +      Y+    D+        IG   N  +  
Sbjct: 166 VNSKDP-EYFPSLTIDGRMLVFTRRVNSKNEDFYVSEKDDSLGWMPAYSIGAPVNSANNE 224

Query: 261 LAPRFSSNGKRALIS----------------VQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            A   S +G   + +                ++ +E + +  ++L S       NT    
Sbjct: 225 GAQNVSLDGNMLVFTGCDFPGGRGSCDIYYTIRTEEGLWVDPMNLGSPI-----NTRAWE 279

Query: 305 ISASYSPDSSQIVFES---DREGKEQLYVMQSNG--SDQKRISQD--KEASYFDPVWSPQ 357
              S S D   + F     D      +  MQ NG     +R+  +         P   P 
Sbjct: 280 SQPSLSADKQTLYFARETQDAGSDIFMSKMQPNGKWGYPERLDSNINTTGREATPFIHPD 339

Query: 358 GDLIAFTKFSGEKF---AIGVMK--KDGS-------QERLLVEDSNLQAPTWSPSGRSLI 405
              + F+    + F    I V +   DGS          +   D +      +  G++  
Sbjct: 340 NQTLYFSSNGHQGFGDMDIFVSRRQPDGSWGPAVNLGYPINTADEDASLIV-AADGKTAY 398

Query: 406 FSRKK-DGDTGSKLYSIDL 423
           F+  + D      LYS +L
Sbjct: 399 FASDRSDSRGQLDLYSFEL 417


>gi|7512892|pir||T14745 hypothetical protein DKFZp586G1624.1 - human (fragment)
          Length = 205

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 12/132 (9%)

Query: 284 IYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           I+++D  S +T       ++ +        S +++P   +++  S  +    + V   + 
Sbjct: 10  IWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIRVWDVST 67

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                +   +     + +WSP G  I  T  S   F +   +     ER        Q  
Sbjct: 68  ETCVPLPWFRGGGVTNLLWSPDGSKILATTPSA-VFRVWEAQMWT-CERWPTLSGRCQTG 125

Query: 396 TWSPSGRSLIFS 407
            WSP G  L+F+
Sbjct: 126 CWSPDGSRLLFT 137



 Score = 40.0 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 17/134 (12%), Positives = 46/134 (34%), Gaps = 16/134 (11%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + L+      +    ++P+  ++  A+        + + D   +            +  
Sbjct: 27  AQVLSHPGHTPVTSLAWAPSGGRLLSAS---PVDAAIRVWDVSTETCVPLPWFRGGGVTN 83

Query: 263 PRFSSNGKRALIS----VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +S +G + L +    V +     +++        ER         +  +SPD S+++F
Sbjct: 84  LLWSPDGSKILATTPSAVFRVWEAQMWTC-------ERWPTLSGRCQTGCWSPDGSRLLF 136

Query: 319 ESDREGKEQLYVMQ 332
                G+  +Y + 
Sbjct: 137 TV--LGEPLIYSLS 148


>gi|304321953|ref|YP_003855596.1| putative dipeptidyl peptidase IV [Parvularcula bermudensis
           HTCC2503]
 gi|303300855|gb|ADM10454.1| putative dipeptidyl peptidase IV [Parvularcula bermudensis
           HTCC2503]
          Length = 739

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 68/199 (34%), Gaps = 49/199 (24%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-----------TRIDRAPKRIGN--- 255
               L  P FSP+ +++      ++D   + L              R D+  +  G+   
Sbjct: 38  SGPSLRSPSFSPDGRQITLLRGREDDARTLDLWAYDVVNGEATILVRSDQVTETSGDLSE 97

Query: 256 -----------FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                      + + I++ ++   G+  L  ++ D    ++  DL   A +++T+T    
Sbjct: 98  EEKNRRERQRIYETGIISYQWDGAGESILFPIEGD----VFLFDLNVMAPQQITDTEAFE 153

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------- 353
                SP    + +  D     +L+V   +   +++++     +  +             
Sbjct: 154 TDPKISPAGGFVSYVRD----NELFVYDLDRRKERQVTFGASDTVRNATAEFVAQEEFKR 209

Query: 354 -----WSPQGDLIAFTKFS 367
                WS   + I FT+  
Sbjct: 210 NTGYWWSRNDEYIVFTQID 228



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 59/187 (31%), Gaps = 30/187 (16%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +    D   +R   +    D     +          R S + KR           D+  V
Sbjct: 265 FLARPDRRGVREIDLGPDDDIYIIDVTWHGGTPYVQRLSRDQKRL----------DLLRV 314

Query: 288 DLQSNATE-RLTNTLFINISASY--------SPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  +  +   LT       S ++        S D    ++ES+R G   +Y    +G+  
Sbjct: 315 DPATGNSTLVLT-----ETSETWLNKRGGLTSLDDGTFLWESERSGYNHIYQYDGDGTLL 369

Query: 339 KRISQDKEASYFDPVWSPQGD-----LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           ++I+   +          +G+      I  +K    +  +  +  +G     L  ++   
Sbjct: 370 RQITS-GDWPVASINCVNEGEAGGALYITASKDQAIEQHLFRVPLEGGAPEQLTTEAGWH 428

Query: 394 APTWSPS 400
             ++S  
Sbjct: 429 GGSYSAD 435



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 70/182 (38%), Gaps = 37/182 (20%)

Query: 262 APRFSSNGKRA-LISVQKDEA--MDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIV 317
           +P FS +G++  L+  ++D+A  +D+++ D+ +     L  +  +   S   S +     
Sbjct: 44  SPSFSPDGRQITLLRGREDDARTLDLWAYDVVNGEATILVRSDQVTETSGDLSEEEK--- 100

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              +R  ++++Y                E       W   G+ I F      +  + +  
Sbjct: 101 ---NRRERQRIY----------------ETGIISYQWDGAGESILF----PIEGDVFLFD 137

Query: 378 KDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            +    + + +    +  P  SP+G  + + R       ++L+  DL+ R E  +   A 
Sbjct: 138 LNVMAPQQITDTEAFETDPKISPAGGFVSYVRD------NELFVYDLDRRKERQVTFGAS 191

Query: 437 AS 438
            +
Sbjct: 192 DT 193


>gi|58264364|ref|XP_569338.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134110151|ref|XP_776286.1| hypothetical protein CNBC6750 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258958|gb|EAL21639.1| hypothetical protein CNBC6750 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57225570|gb|AAW42031.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 564

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 69/222 (31%), Gaps = 26/222 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQ 277
           +S +     Y     ++    ++     +     +G      L+   +    +  L   +
Sbjct: 84  WSGDS---TYLLVHSKEAKMAWVYGVAQEGEAAHVGGMGVEGLSKVEWGKGNREVLAWTE 140

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ-SNGS 336
            D    +Y   L S  T  + N        +YSPDS  +       GK+ + V    +G 
Sbjct: 141 ID--SRLYIYSLSSGETRLIQNVKPTADGYTYSPDSRYLAVTEKHLGKDYIGVYDILDGY 198

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQA 394
           +  R             WSP G  IA        +++ +    G     L     +   A
Sbjct: 199 NLLRHFPLLTVDVQGVSWSPCGKYIA-AWDLPLSYSLHIHSAIGPHLTHLNPSSPAFSLA 257

Query: 395 P-----------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           P            W+P GR +       G    K+  ++ +G
Sbjct: 258 PNETPGLGLRTLAWAPGGRWIAV-----GGWDGKVRIVESDG 294


>gi|328881650|emb|CCA54889.1| hypothetical protein SVEN_1602 [Streptomyces venezuelae ATCC 10712]
          Length = 331

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 56/175 (32%), Gaps = 18/175 (10%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           +  F++R   +       +       +  DG        + D   +   F+ +  +  YA
Sbjct: 158 RSAFSTRTSILDLRTGYLVKNMEQIPLTLDGRRHH----APDVNYWGVSFAADDNR-FYA 212

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEAMDIY 285
           T        +   D R   A       R  +  P  S +G R       S   DE   +Y
Sbjct: 213 TVSTGGRTHLVEGDMRGWSARAL----RENVECPSLSPDGTRLAFKKRVSDGPDEPWRLY 268

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             +L +     +     I+  A ++ D   + +         ++ + ++G+   R
Sbjct: 269 VYELATGREHAVAERRGIDDQALWT-DRDTLAY----GYGGGVWTVPADGTGAPR 318



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 73/220 (33%), Gaps = 33/220 (15%)

Query: 239 VYLMDTRIDRAPKRIGNFRS--MILAP---RFSSNGKRALISVQKDEAM---DIYSVDLQ 290
           +Y+ DT   R  +   +     ++  P   RF + G  AL   ++           +D Q
Sbjct: 61  LYVRDTTSGRIARVDPSAPGGRVVGGPSCDRFHAAGGTALCLQRRPGVPARSYALVLDRQ 120

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREG--------KEQLYVMQSNGS------ 336
                R+     I   A  S   + + +     G          +  ++           
Sbjct: 121 LREVRRI-GLPGIPSRARVSASGNMLAWTMFATGDSYARSAFSTRTSILDLRTGYLVKNM 179

Query: 337 DQKRISQDKEA------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +Q  ++ D         +Y+   ++   +    T  +G +  +      G   R L E  
Sbjct: 180 EQIPLTLDGRRHHAPDVNYWGVSFAADDNRFYATVSTGGRTHLVEGDMRGWSARALRE-- 237

Query: 391 NLQAPTWSPSGRSLIFSRK--KDGDTGSKLYSIDLNGRNE 428
           N++ P+ SP G  L F ++     D   +LY  +L    E
Sbjct: 238 NVECPSLSPDGTRLAFKKRVSDGPDEPWRLYVYELATGRE 277


>gi|288929675|ref|ZP_06423519.1| putative alanyl dipeptidyl peptidase [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288329180|gb|EFC67767.1| putative alanyl dipeptidyl peptidase [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 818

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 74/211 (35%), Gaps = 28/211 (13%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLTN 299
               + +      +     S++G+  L  V +            +Y +D+++  T  + +
Sbjct: 323 TGLTRPLTFGYHNVSLEDISADGRYILYMVSRSRLEKRPTTVSSLYKLDVKTMQTTCVAH 382

Query: 300 TLFINISASYSPDSSQI-------VFESDREGK-----------EQLYVMQSNGSDQKRI 341
                  A +SPD+S +        F SD                QL+ +  +      +
Sbjct: 383 DEGFLSEARFSPDASVLLVKATAEAF-SDVGKNVPEGSTPNMYDYQLFALNVSNKAVTPL 441

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPS 400
           ++    S  +  W+P+   I FT    ++  +  +    ++   L    + +   +++ +
Sbjct: 442 TKTFNPSIENFSWNPRDGQIYFTALDKDQQKLFRLNPKTNKFTRLNMPEDYVTRVSFAHN 501

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              L     +      +LY+++L+     L+
Sbjct: 502 AP-LAVWYGESASNSDRLYTLNLDNGKSNLL 531


>gi|195574771|ref|XP_002105357.1| GD17720 [Drosophila simulans]
 gi|194201284|gb|EDX14860.1| GD17720 [Drosophila simulans]
          Length = 446

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 102/268 (38%), Gaps = 26/268 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-PNQQKVAYATYDDEDILRVYLMDT 244
           +G    +  V++   A + ++    D ++F   F+ P+  K+   ++D            
Sbjct: 135 TGSYDRTCHVINTQTAQVEHILSGHDNVVFSVGFNFPHCDKIVTGSFDG-------TAKV 187

Query: 245 RIDRAPKRIGNFRSMI---LAPRFSS-NGKRALISVQKDEAMDIYSVDLQSN-ATERLTN 299
               + + +  F       +A  F   +GK    +   D +  IY  D++++   ++LT+
Sbjct: 188 WSATSGQSLCTFYGHNAELVAAEFHPVDGKSIA-TASLDGSARIY--DVETSHELQQLTH 244

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                I+A ++ D   ++     +    ++ ++S     +   +   A   + VW+  G 
Sbjct: 245 HGAEVIAARFNRDG-HMLLTGSFDHTAAIWDVRSKSLGHQL--RGHSAELSNCVWNFSGS 301

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSK 417
           LIA            + K D  QE  L    + +    ++  +GR L        D  ++
Sbjct: 302 LIATGSLDNTARIWDIRKLD--QELYLAARHSDEVLDVSFDAAGRLLA---TCSSDCTAR 356

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVGF 445
           ++ ++ +   E L     ++ +   V F
Sbjct: 357 VWRLEGSSELEMLSLMAGHSDEVSKVCF 384


>gi|195341223|ref|XP_002037210.1| GM12236 [Drosophila sechellia]
 gi|194131326|gb|EDW53369.1| GM12236 [Drosophila sechellia]
          Length = 446

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 44/268 (16%), Positives = 102/268 (38%), Gaps = 26/268 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-PNQQKVAYATYDDEDILRVYLMDT 244
           +G    +  V++   A + ++    D ++F   F+ P+  K+   ++D            
Sbjct: 135 TGSYDRTCHVINTQTAQVEHILSGHDNVVFSVGFNFPHCDKIVTGSFDG-------TAKV 187

Query: 245 RIDRAPKRIGNFRSMI---LAPRFSS-NGKRALISVQKDEAMDIYSVDLQSN-ATERLTN 299
               + + +  F       +A  F   +GK    +   D +  IY  D++++   ++LT+
Sbjct: 188 WSATSGQSLCTFYGHNAELVAAEFHPVDGKSIA-TASLDGSARIY--DVETSHELQQLTH 244

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                I+A ++ D   ++     +    ++ ++S     +   +   A   + VW+  G 
Sbjct: 245 HGAEVIAARFNRDG-HMLLTGSFDHTAAIWDVRSKSLGHQL--RGHSAELSNCVWNFSGS 301

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSK 417
           LIA            + K D  QE  L    + +    ++  +GR L        D  ++
Sbjct: 302 LIATGSLDNTARIWDIRKLD--QELYLAARHSDEVLDVSFDAAGRLLA---TCSSDCTAR 356

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVGF 445
           ++ ++ +   E L     ++ +   V F
Sbjct: 357 VWRLEGSSELEMLSLMAGHSDEVSKVCF 384


>gi|87311217|ref|ZP_01093340.1| putative aminopeptidase precursor [Blastopirellula marina DSM 3645]
 gi|87286125|gb|EAQ78036.1| putative aminopeptidase precursor [Blastopirellula marina DSM 3645]
          Length = 730

 Score = 50.0 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 38/90 (42%), Gaps = 4/90 (4%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSN--LQA 394
            R              SP G  +A+         + V      G   + + ED++  +++
Sbjct: 85  PRRKFFGNPEKARARLSPDGTKLAYLAPVDGVLNVWVGSSASLGKDAKPITEDTHRGIRS 144

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +WS +   +++++ KDGD    +Y+++L 
Sbjct: 145 FSWSYTNNHVLYTQDKDGDENFHIYAVNLT 174



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 64/178 (35%), Gaps = 22/178 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLT--NTLFINISASYSPDSSQIVFE 319
           R S +G +       D  ++++           + +T      I  S S+S  ++ +++ 
Sbjct: 99  RLSPDGTKLAYLAPVDGVLNVWVGSSASLGKDAKPITEDTHRGI-RSFSWSYTNNHVLYT 157

Query: 320 SDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIG 374
            D++G     +Y +     + K ++  ++        S   P   LI     + +   + 
Sbjct: 158 QDKDGDENFHIYAVNLTTDEIKDLTPLEKIRAEIDNVSENFPNEILIGLNDRNPQLHDLY 217

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSP----SGRSLIFSRKKDGDTGSKLYSID--LNGR 426
            +  +  ++ LL      + P ++         + F+     D G ++Y      +G+
Sbjct: 218 RLNVETGEKELL-----QENPGFAGFLTDDNYKVRFAMTYTPDAG-QMYLTPTETDGK 269



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 20/146 (13%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           A  SPD +++ + +  +G   ++V  S   G D K I++D         WS   + + +T
Sbjct: 98  ARLSPDGTKLAYLAPVDGVLNVWVGSSASLGKDAKPITEDTHRGIRSFSWSYTNNHVLYT 157

Query: 365 KFSGE--KFAIGVMKKDGSQERLLV---------EDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +       F I  +     + + L          ++ +   P        ++        
Sbjct: 158 QDKDGDENFHIYAVNLTTDEIKDLTPLEKIRAEIDNVSENFP------NEILIGLNDRNP 211

Query: 414 TGSKLYSIDL-NGRNETLINTPAYAS 438
               LY +++  G  E L   P +A 
Sbjct: 212 QLHDLYRLNVETGEKELLQENPGFAG 237


>gi|320095135|ref|ZP_08026843.1| NACHT domain protein [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319977917|gb|EFW09552.1| NACHT domain protein [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 1028

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 6/105 (5%)

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                  SA++SPD ++I+  +D +G  +++   +  ++   +    ++S     WSP   
Sbjct: 930  HSGSISSAAWSPDGARILTGAD-DGTARVW--DARTAETT-LELTHQSSVTTVAWSPDSA 985

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             I      G         + G     L     +QA  WSP G  +
Sbjct: 986  RILTGTTDGTAR--AWDARTGKTILELTHTDWVQAVAWSPDGAHI 1028



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 10/113 (8%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
             +       +    +SP+  ++        D     + D R       +   +S +    
Sbjct: 925  QIFGGHSGSISSAAWSPDGARI----LTGADDGTARVWDARTAETTLELT-HQSSVTTVA 979

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQI 316
            +S +  R L +   D     +  D ++  T   LT+T ++   A +SPD + I
Sbjct: 980  WSPDSARIL-TGTTDGTARAW--DARTGKTILELTHTDWVQAVA-WSPDGAHI 1028



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 44/113 (38%), Gaps = 9/113 (7%)

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISAS 308
             +  G     I +  +S +G R L +   D    ++  D ++  T   LT+   +  + +
Sbjct: 924  TQIFGGHSGSISSAAWSPDGARIL-TGADDGTARVW--DARTAETTLELTHQSSV-TTVA 979

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +SPDS++I+     +G  + +   +            +       WSP G  I
Sbjct: 980  WSPDSARIL-TGTTDGTARAW--DARTGKTILELTHTDW-VQAVAWSPDGAHI 1028



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 33/108 (30%), Gaps = 8/108 (7%)

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPT 396
            + +I      S     WSP G  I      G      V     ++  L L   S++    
Sbjct: 923  ETQIFGGHSGSISSAAWSPDGARILTGADDGTA---RVWDARTAETTLELTHQSSVTTVA 979

Query: 397  WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            WSP    ++ +   DG   +  +          L +T  +     W  
Sbjct: 980  WSPDSARIL-TGTTDGTARA--WDARTGKTILELTHTD-WVQAVAWSP 1023


>gi|291242055|ref|XP_002740924.1| PREDICTED: PCAF associated factor 65 beta-like [Saccoglossus
           kowalevskii]
          Length = 599

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 10/157 (6%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +YQ       D ++  +    +  S      L  +DR+   +R        +    RF P
Sbjct: 389 VYQGHNYPIWDMDTGSVGPYFATASQDHTARLWTLDRN-YPLRIFAGHLMDVDCV-RFHP 446

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N   +A  + D      V L   +  +  +     +  + +  FS NGK    S  +D  
Sbjct: 447 NCNYIATGSSDR----TVRLWSVQDGKCVRLFTGHKGTVFSLAFSPNGKFLA-SSGEDRK 501

Query: 282 MDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIV 317
           + ++  DL S    + L+       S ++S DS+ + 
Sbjct: 502 VKLW--DLGSGNMVKELSGHQDNVYSLNFSNDSTMLA 536



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 71/208 (34%), Gaps = 28/208 (13%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-----SMIL 261
                  ++   F+ +   +  ++ D    +R++ +DT  ++   +  N+      +  +
Sbjct: 348 LRGHSGPVYAACFTVDSSHLLSSSEDT--TVRLWDLDTYTNKVVYQGHNYPIWDMDTGSV 405

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVF-E 319
            P F+        +  +D    ++++D   N   R+     +++    + P+ + I    
Sbjct: 406 GPYFA--------TASQDHTARLWTLDR--NYPLRIFAGHLMDVDCVRFHPNCNYIATGS 455

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           SDR     + +         R+    + + F   +SP G  +A    SGE   + +    
Sbjct: 456 SDRT----VRLWSVQDGKCVRLFTGHKGTVFSLAFSPNGKFLA---SSGEDRKVKLWDLG 508

Query: 380 GSQERLLVEDSNLQAPT--WSPSGRSLI 405
                  +        +  +S     L 
Sbjct: 509 SGNMVKELSGHQDNVYSLNFSNDSTMLA 536


>gi|283782515|ref|YP_003373270.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Pirellula staleyi DSM 6068]
 gi|283440968|gb|ADB19410.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Pirellula staleyi DSM 6068]
          Length = 707

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 38/99 (38%), Gaps = 4/99 (4%)

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQA 394
             R           P  SP G  IA+         + V   D    ++   L +   + +
Sbjct: 55  VPRAKFFGNPEKARPRLSPDGKQIAYVAPVEGVLNVWVGPADDLAKAKPVTLDKHRGVTS 114

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
             W+ + + L++++ K+GD    LYSI L  G  + L  
Sbjct: 115 FFWAYTSQHLLYTQDKNGDEDDHLYSITLATGDIKDLTP 153



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 61/171 (35%), Gaps = 11/171 (6%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYS---VDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           PR S +GK+       +  ++++     DL       L     +  S  ++  S  +++ 
Sbjct: 69  PRLSPDGKQIAYVAPVEGVLNVWVGPADDLAKAKPVTLDKHRGV-TSFFWAYTSQHLLYT 127

Query: 320 SDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFA-I 373
            D+ G   + LY +     D K ++  ++ S      S   P+  L+         +  I
Sbjct: 128 QDKNGDEDDHLYSITLATGDIKDLTPIEKISATVEGVSEKFPEEILVGINDRGERHYHDI 187

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +     +++LL+E+  L           + F+     D G   Y  D  
Sbjct: 188 YKINLVTGEKKLLLENPGLAGFMID-DDYKVRFALNYTPDAGQMYYKPDAT 237



 Score = 37.3 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALI 274
            PR SP+ +++AY     E +L V++         K +  +    + +  ++   +  L 
Sbjct: 68  RPRLSPDGKQIAYVA-PVEGVLNVWVGPADDLAKAKPVTLDKHRGVTSFFWAYTSQHLLY 126

Query: 275 SVQKDEAMD--IYSVDLQSNATERLT 298
           +  K+   D  +YS+ L +   + LT
Sbjct: 127 TQDKNGDEDDHLYSITLATGDIKDLT 152


>gi|242803316|ref|XP_002484149.1| sulfur metabolite repression control protein, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218717494|gb|EED16915.1| sulfur metabolite repression control protein, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 327

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 30/86 (34%), Gaps = 6/86 (6%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     L   D     +R         ++   FSP+ + VA  +YD+     V L D   
Sbjct: 245 GFRDYQLW--DPATGILRQTLDGHSDSVWGVAFSPDGKLVASGSYDE----TVKLWDPAT 298

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRA 272
               + +      + A  FS +GK  
Sbjct: 299 GTLRQTLVGHSGWVGAVAFSPDGKFL 324



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 26/83 (31%), Gaps = 5/83 (6%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G     +        ++       S +   +SP G L+A   +      + +        
Sbjct: 245 GFRDYQLWDPATGILRQTLDGHSDSVWGVAFSPDGKLVASGSYDET---VKLWDPATGTL 301

Query: 384 RLLV--EDSNLQAPTWSPSGRSL 404
           R  +      + A  +SP G+ L
Sbjct: 302 RQTLVGHSGWVGAVAFSPDGKFL 324



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 26/81 (32%), Gaps = 4/81 (4%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                 L D       + +      +    FS +GK    S   DE + ++  D  +   
Sbjct: 245 GFRDYQLWDPATGILRQTLDGHSDSVWGVAFSPDGKLVA-SGSYDETVKLW--DPATGTL 301

Query: 295 ER-LTNTLFINISASYSPDSS 314
            + L        + ++SPD  
Sbjct: 302 RQTLVGHSGWVGAVAFSPDGK 322


>gi|166365201|ref|YP_001657474.1| peptidase, S9C (acylaminoacyl-peptidase) family protein
           [Microcystis aeruginosa NIES-843]
 gi|166087574|dbj|BAG02282.1| peptidase, S9C (acylaminoacyl-peptidase) family protein
           [Microcystis aeruginosa NIES-843]
          Length = 640

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 57/333 (17%), Positives = 110/333 (33%), Gaps = 56/333 (16%)

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK- 170
           V  RV + G     +            + G  +F + A  R I    +D + Q +T E  
Sbjct: 71  VRTRVHEYGGGSYLI------------VAGIIYFCNFADQR-IYRQTADSLPQPLTPENS 117

Query: 171 --------GDFNSRILFV--SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
                    +F +R++ V    S       NS+  +D D  NI  L  S D     PR S
Sbjct: 118 CRYADLILDEFRNRLICVCEDHSQKDREPVNSIVSIDVDTGNIETLV-SGDDFYTSPRLS 176

Query: 221 PNQQKVAYATYDDED------ILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRAL 273
            +  ++A+ +++  +       L V  ++       + I    +  +  PR+S++ ++  
Sbjct: 177 ADGSRLAWISWNHPNMPWDSSFLWVADINHLYLSNIRVIAGGENESVCEPRWSAD-QQLY 235

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY--------SPDSSQIVFESDREGK 325
            +  +++  + Y           +           +            SQI+    + G+
Sbjct: 236 FTSDRNDFWNFYCFKHDEQIEPVIEPIDAEFAYPHWVFGLSNYGFAGESQIICSYTKNGR 295

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDGS 381
             L  + +   + + I    + +      S     I F    G  F     +  M     
Sbjct: 296 WYLGSIDTVNREFQEIIT-ADTNISSLQVSDN--KIVFI---GGSFREVTAVVSMDLATG 349

Query: 382 QERLLVEDSN--LQAPTWS-PSGRSLIFSRKKD 411
              +L   SN  + +  +S P    L F   K 
Sbjct: 350 TREILKSSSNLTISSDYFSIP--EMLAFPTSKG 380



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 21/181 (11%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-----LYVM 331
            ++    I S+D+ +   E L +      S   S D S++ + S            L+V 
Sbjct: 143 DREPVNSIVSIDVDTGNIETLVSGDDFYTSPRLSADGSRLAWISWNHPNMPWDSSFLWVA 202

Query: 332 QSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             N    S+ + I+  +  S  +P WS     + FT    + +     K D   E ++  
Sbjct: 203 DINHLYLSNIRVIAGGENESVCEPRWSAD-QQLYFTSDRNDFWNFYCFKHDEQIEPVIEP 261

Query: 389 -DSNLQAPTW----SPSG----RSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYAS 438
            D+    P W    S  G      +I S  K+G     L SID +N   + +I      S
Sbjct: 262 IDAEFAYPHWVFGLSNYGFAGESQIICSYTKNGRW--YLGSIDTVNREFQEIITADTNIS 319

Query: 439 D 439
            
Sbjct: 320 S 320


>gi|37520104|ref|NP_923481.1| WD-40 repeat-containing protein [Gloeobacter violaceus PCC 7421]
 gi|35211096|dbj|BAC88476.1| WD-40 repeat protein [Gloeobacter violaceus PCC 7421]
          Length = 354

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 76/254 (29%), Gaps = 41/254 (16%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                    RLWD    +++   +     A+W  + H    D    +    G        
Sbjct: 80  ATGGQDGRARLWDPTTGREMAALE---GGAAW--VEHLAWSDAPYLLATAAG-------- 126

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                        L +   DG  IR   P     +    + P Q++ A + Y        
Sbjct: 127 -----------RRLNLWSADGQLIRTAEPPHTSTISGLVWHPGQRRFATSCYG------A 169

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             +   +   P  +  ++  ++A  +S +G+  +    +D  + I+     S    ++  
Sbjct: 170 VRLHLPLKPEPADVFEYQGSLIALSWSPDGRWIV-CGCQDATVHIWE--TTSGEDLQMRG 226

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ----KRISQDKEASYFDPVWS 355
                 + S+ P    +   S       + V   +G        R+    + S     + 
Sbjct: 227 FETKVRNLSWEPGGRYLATAS----GMIITVWDFSGRGPANTRPRLLSAHQGSVTGLAYQ 282

Query: 356 PQGDLIAFTKFSGE 369
            +G L+A     G 
Sbjct: 283 HRGGLLASGSSDGS 296



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/242 (11%), Positives = 71/242 (29%), Gaps = 17/242 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                   +  +    +S +   +A AT        V L+          +    S  L 
Sbjct: 14  AERWRTGLEDYVTATAWSADGTLLAAATASGP----VALLAGDTGEVAATLPGHPSGTLT 69

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             +S   +    +  +D    ++           L          ++S     +   + R
Sbjct: 70  LAWSPRDRYLA-TGGQDGRARLWD-PTTGREMAALEGGAAWVEHLAWSDAPYLLATAAGR 127

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               +L +  ++G   +       ++    VW P     A + +   +  + +  +    
Sbjct: 128 ----RLNLWSADGQLIRTAEPPHTSTISGLVWHPGQRRFATSCYGAVRLHLPLKPE---P 180

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             +     +L A +WSP GR ++   +   D    ++    +G +  +        +  W
Sbjct: 181 ADVFEYQGSLIALSWSPDGRWIVCGCQ---DATVHIWET-TSGEDLQMRGFETKVRNLSW 236

Query: 443 VG 444
             
Sbjct: 237 EP 238


>gi|311268978|ref|XP_003132294.1| PREDICTED: POC1 centriolar protein homolog A-like, partial [Sus
           scrofa]
          Length = 327

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/237 (16%), Positives = 84/237 (35%), Gaps = 18/237 (7%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
             F  + + SG + + L V      +  Y        +    FSP+   +A  + D    
Sbjct: 27  FSFNMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRD--KT 84

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           +R+++ + + +    R     + + +  F S+G+   ++   D+ + ++S   Q      
Sbjct: 85  VRIWVPNIKGESTVFR--AHTATVRSVHFCSDGQS-FVTASDDKTIKVWSTHRQ-KFLFS 140

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L+  +     A +SPD   IV  SD    + + +      +      +         + P
Sbjct: 141 LSQHINWVRCAKFSPDGRLIVSASD---DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHP 197

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
            G  +A            V        RLL    +  + + A ++ PSG  L+ +  
Sbjct: 198 SGTCVAAAGMDNTVKVWDV-----RTHRLLQHYQLHSAAVNALSFHPSGNYLVTASS 249



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/225 (13%), Positives = 67/225 (29%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +      +  +    +    F  + Q    A+ D      + +  T 
Sbjct: 78  SGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK----TIKVWSTH 133

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             +    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 134 RQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKTSRECVHSYCEHGGFV 190

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + +           + V         +  Q   A+     + P G+ +   
Sbjct: 191 TYVDFHPSGTCVAAAGM---DNTVKVWDVRTHRLLQHYQLHSAAVNALSFHPSGNYLVTA 247

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 248 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 282


>gi|238483013|ref|XP_002372745.1| WD repeat protein [Aspergillus flavus NRRL3357]
 gi|220700795|gb|EED57133.1| WD repeat protein [Aspergillus flavus NRRL3357]
          Length = 789

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 10/161 (6%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSL------CVMDRDGANIRYLTPSRDQILFE 216
            ++ T       SR +  + +   G ++  +       V++ D     +         F 
Sbjct: 563 VETNTFIADQELSRAINCTATSPDGRLRCVIGDSPDAWVVEADTGRPVHPLRGHRDFGFA 622

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A +  D      V + D R  R  ++I +  +   + R+S  G      +
Sbjct: 623 CAWSPDMRHIATSNQDK----TVIIWDARTWRVLEKIESDVAGYRSLRYSPVGGGPRTLL 678

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             + A  I  ++ Q+  T ++ +       A YSPD S + 
Sbjct: 679 LCEPADRISIINAQTYQTRQVHDFFGEIGGADYSPDGSTVW 719



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 56/153 (36%), Gaps = 10/153 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +          D    ++++    R    +   R    A  +S + +    +  +D
Sbjct: 584 SPDGR----LRCVIGDSPDAWVVEADTGRPVHPLRGHRDFGFACAWSPDMRHIA-TSNQD 638

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           + + I+  D ++    E++ + +    S  YSP           E  +++ ++ +     
Sbjct: 639 KTVIIW--DARTWRVLEKIESDVAGYRSLRYSPVGGGPRTLLLCEPADRISIINAQTYQT 696

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +++  D         +SP G  + +   + E F
Sbjct: 697 RQV-HDFFGEIGGADYSPDGSTV-WVANTDEHF 727



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 5/100 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +  IN +A+ SPD        D       +V++++        +      F   WSP   
Sbjct: 575 SRAINCTAT-SPDGRLRCVIGD---SPDAWVVEADTGRPVHPLRGHRDFGFACAWSPDMR 630

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            IA T    +   I   +     E++  + +  ++  +SP
Sbjct: 631 HIA-TSNQDKTVIIWDARTWRVLEKIESDVAGYRSLRYSP 669


>gi|169766306|ref|XP_001817624.1| WD repeat protein [Aspergillus oryzae RIB40]
 gi|83765479|dbj|BAE55622.1| unnamed protein product [Aspergillus oryzae]
          Length = 789

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 10/161 (6%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSL------CVMDRDGANIRYLTPSRDQILFE 216
            ++ T       SR +  + +   G ++  +       V++ D     +         F 
Sbjct: 563 VETNTFIADQELSRAINCTATSPDGRLRCVIGDSPDAWVVEADTGRPVHPLRGHRDFGFA 622

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A +  D      V + D R  R  ++I +  +   + R+S  G      +
Sbjct: 623 CAWSPDMRHIATSNQDK----TVIIWDARTWRVLEKIESDVAGYRSLRYSPVGGGPRTLL 678

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             + A  I  ++ Q+  T ++ +       A YSPD S + 
Sbjct: 679 LCEPADRISIINAQTYQTRQVHDFFGEIGGADYSPDGSTVW 719



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 56/153 (36%), Gaps = 10/153 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +          D    ++++    R    +   R    A  +S + +    +  +D
Sbjct: 584 SPDGR----LRCVIGDSPDAWVVEADTGRPVHPLRGHRDFGFACAWSPDMRHIA-TSNQD 638

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           + + I+  D ++    E++ + +    S  YSP           E  +++ ++ +     
Sbjct: 639 KTVIIW--DARTWRVLEKIESDVAGYRSLRYSPVGGGPRTLLLCEPADRISIINAQTYQT 696

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +++  D         +SP G  + +   + E F
Sbjct: 697 RQV-HDFFGEIGGADYSPDGSTV-WVANTDEHF 727



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 5/100 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +  IN +A+ SPD        D       +V++++        +      F   WSP   
Sbjct: 575 SRAINCTAT-SPDGRLRCVIGD---SPDAWVVEADTGRPVHPLRGHRDFGFACAWSPDMR 630

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            IA T    +   I   +     E++  + +  ++  +SP
Sbjct: 631 HIA-TSNQDKTVIIWDARTWRVLEKIESDVAGYRSLRYSP 669


>gi|302916683|ref|XP_003052152.1| hypothetical protein NECHADRAFT_92706 [Nectria haematococca mpVI
           77-13-4]
 gi|256733091|gb|EEU46439.1| hypothetical protein NECHADRAFT_92706 [Nectria haematococca mpVI
           77-13-4]
          Length = 780

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 7/97 (7%)

Query: 316 IVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAF----TKFSGEK 370
           +V+ S+R+G  QLY++    G+   +I++   +             I F     +   E 
Sbjct: 416 LVWSSERDGYNQLYLVDLAQGTISNQITKGSWSVGDVQFVKEDERRIWFQGYGVQPEEEP 475

Query: 371 FAIGV--MKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +   +  +  DGS  ++L E     +  WSP  R LI
Sbjct: 476 YHKHLCCVNFDGSDFKILTEGDGTHSWAWSPDKRFLI 512



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 80/218 (36%), Gaps = 36/218 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS---------SNG 269
           +S +  +  +  +++     + ++   ID   + +   +S      ++         S+G
Sbjct: 358 WSKSGHEYRFL-FNERGHQHLRVIGIGIDGQVRTLVEEQSSTF-VDYTKLYVKLLEESDG 415

Query: 270 KRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYS-PDSSQIVFES------D 321
              + S ++D    +Y VDL       ++T   +      +   D  +I F+       +
Sbjct: 416 --LVWSSERDGYNQLYLVDLAQGTISNQITKGSWSVGDVQFVKEDERRIWFQGYGVQPEE 473

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               + L  +  +GSD K ++ + + ++    WSP    +  T    +     V++   S
Sbjct: 474 EPYHKHLCCVNFDGSDFKILT-EGDGTHSW-AWSPDKRFLIDTWSRVDLVPTTVLRDGAS 531

Query: 382 QERLL----VEDSNLQAPTWSP---------SGRSLIF 406
            E LL         L+   W+P          G ++I+
Sbjct: 532 GEMLLELSKTSMDELEKDGWAPPERFAAPGRDGETMIY 569


>gi|160892208|ref|ZP_02073211.1| hypothetical protein BACUNI_04672 [Bacteroides uniformis ATCC 8492]
 gi|317480749|ref|ZP_07939835.1| hypothetical protein HMPREF1007_02952 [Bacteroides sp. 4_1_36]
 gi|156858686|gb|EDO52117.1| hypothetical protein BACUNI_04672 [Bacteroides uniformis ATCC 8492]
 gi|316903090|gb|EFV24958.1| hypothetical protein HMPREF1007_02952 [Bacteroides sp. 4_1_36]
          Length = 375

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 59/190 (31%), Gaps = 15/190 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALIS 275
           FSP+ + +    +  + ILR  +                     PR   FS NGK A + 
Sbjct: 178 FSPDGKYIFATDFSADRILRFVMHPDNPIPHASLEAVGIEADSGPRHLTFSPNGKFAYLI 237

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YSPDSSQIVFESDR---EGKE 326
            +    +  +S D      E++       ++A        SPD   + + S+R   +G  
Sbjct: 238 TELSGKVIAFSYD--DGCLEQIQTITADTVAARGSADIHLSPDGKYL-YASNRLKEDGIA 294

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
              V   NG+  K   Q       +   +P G  +           +    +        
Sbjct: 295 IFAVNPENGTLAKVGYQPTGIHPRNFNITPNGKYLLAACRDSNVIQVYKRNEVTGLLEDT 354

Query: 387 VEDSNLQAPT 396
            +D  +  P 
Sbjct: 355 HQDIVVDMPV 364



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 59/196 (30%), Gaps = 14/196 (7%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                +    D  +     +       P  I      I    FS +GK    +    + +
Sbjct: 136 GTMSVFPLQKDGTLAPADTLFQGSATGPDAIRQATPHIHCTVFSPDGKYIFATDFSADRI 195

Query: 283 DIYSVDLQSNATERLTNTLFI--NISA---SYSPDSSQIVFESDREGKEQLYVMQSNG-- 335
             + +   +         + I  +      ++SP+       ++  GK   +    +G  
Sbjct: 196 LRFVMHPDNPIPHASLEAVGIEADSGPRHLTFSPNGKFAYLITELSGKVIAFSYD-DGCL 254

Query: 336 SDQKRISQDKEASYFDPVW--SPQGDLI-AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
              + I+ D  A+        SP G  + A  +   +  AI  +  +      +      
Sbjct: 255 EQIQTITADTVAARGSADIHLSPDGKYLYASNRLKEDGIAIFAVNPENGTLAKVGYQPTG 314

Query: 393 QAPT---WSPSGRSLI 405
             P     +P+G+ L+
Sbjct: 315 IHPRNFNITPNGKYLL 330



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 39/234 (16%)

Query: 220 SPNQQKV-AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGKRALISVQ 277
           S + + V A +  +D       L   R     + +    +    P + ++NG+  L +  
Sbjct: 74  SEDGEFVYAVSEMNDSTAALSSLAFDRETGELRLLNTVPTFGADPCYVATNGREVLTANY 133

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-------------SYSPDSSQIVFESDREG 324
               M ++ +          T                       +SPD   I F +D   
Sbjct: 134 SGGTMSVFPLQKDGTLAPADTLFQGSATGPDAIRQATPHIHCTVFSPDGKYI-FATDFSA 192

Query: 325 KEQL-YVMQSN---------------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
              L +VM  +                S  + ++      +   +    G +IAF+   G
Sbjct: 193 DRILRFVMHPDNPIPHASLEAVGIEADSGPRHLTFSPNGKFAYLITELSGKVIAFSYDDG 252

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               I  +  D    R     +++     SP G+ L ++  +  + G  +++++
Sbjct: 253 CLEQIQTITADTVAAR---GSADIHL---SPDGKYL-YASNRLKEDGIAIFAVN 299



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 63/191 (32%), Gaps = 33/191 (17%)

Query: 266 SSNGKRALISVQKDEAMDIYS---VDLQSNATERLTNTLFINISASYSPDSSQIVFESD- 321
           S +G+      + +++    S    D ++     L           Y   + + V  ++ 
Sbjct: 74  SEDGEFVYAVSEMNDSTAALSSLAFDRETGELRLLNTVPTFGADPCYVATNGREVLTANY 133

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYF------------DPVWSPQGDLIAFTKFSGE 369
             G   ++ +Q +G+     +  + ++                V+SP G  I  T FS +
Sbjct: 134 SGGTMSVFPLQKDGTLAPADTLFQGSATGPDAIRQATPHIHCTVFSPDGKYIFATDFSAD 193

Query: 370 KFAIGVMKKD------GSQERLLVEDSNLQAPTWSPSGRS-----------LIFSRKKDG 412
           +    VM  D        +   +  DS  +  T+SP+G+            + FS     
Sbjct: 194 RILRFVMHPDNPIPHASLEAVGIEADSGPRHLTFSPNGKFAYLITELSGKVIAFSYDDGC 253

Query: 413 DTGSKLYSIDL 423
               +  + D 
Sbjct: 254 LEQIQTITADT 264


>gi|126433474|ref|YP_001069165.1| hypothetical protein Mjls_0865 [Mycobacterium sp. JLS]
 gi|126233274|gb|ABN96674.1| conserved hypothetical protein [Mycobacterium sp. JLS]
          Length = 945

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/252 (17%), Positives = 77/252 (30%), Gaps = 40/252 (15%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------ 274
            + Q V    Y +  +  +    +  D  P  +  +    LA   S +G R  +      
Sbjct: 439 NDAQTVYVFDYAERAVYVLDPATSTTDPDPVLVDGYP---LAMALSPDGSRLFVNTMTFA 495

Query: 275 --SVQKDEAMDIYSVDLQSNAT--ERL-----TNTLFINISASYSPDSSQIV---FESDR 322
             S        +  +D  + +   + +     T     N     SPD   +      S  
Sbjct: 496 DASGSTTSQAGLVVIDTATKSVIGQPILYGSPTEGPATNGVILASPDGRYVYTETLASGS 555

Query: 323 EGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL-----IAFTKFSGEKFAIGV 375
            G     L+ + +     + ++     S   PV SP G       +A      +     V
Sbjct: 556 GGVPTGTLWKIDTVAGTVQAVASGLYPS--APVLSPDGTRLYGPAVAVVDGQPQLAIGAV 613

Query: 376 MKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIF------SRKKDGDTGSKLYSIDLNGRNE 428
              DG+   R+ ++  +  A   SP G  L        + +       +L  ID    N 
Sbjct: 614 STADGTMLTRIPIDTGSPTAVAVSPDGTRLYLGQLLGEAGQDPASLTGQLAVIDTGTSNA 673

Query: 429 TLINTPAYASDP 440
               TP  A +P
Sbjct: 674 ---VTPPRAVNP 682



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/261 (16%), Positives = 81/261 (31%), Gaps = 38/261 (14%)

Query: 218 RFSPNQQKVAYATYDDED----ILRVYLMDTRIDR-APKRIGNFRSMILAPRFSSNGKRA 272
            FSP+ ++V  ++           R+ ++D    + A   +    +       S +G+R 
Sbjct: 333 AFSPDGKRVYVSSMSQGADGQLSGRIDVIDAASGQAAGAPVELVNTAATGLVVSPDGRRL 392

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +   D  +    +DLQ N T   T  + I      SP  + +     +   + +YV  
Sbjct: 393 -YTANADSTVT--VIDLQHNNTPVATVPIGIFSGPG-SPGGAPLDIVISQNDAQTVYVFD 448

Query: 333 SNGSDQKRISQDKEASYFDP----------VWSPQGDLIAFTKFS------GEKFAIGVM 376
                   +      +  DP            SP G  +     +            G++
Sbjct: 449 YAERAVYVLDPATSTTDPDPVLVDGYPLAMALSPDGSRLFVNTMTFADASGSTTSQAGLV 508

Query: 377 KKDGSQERLLVEDSNLQAPTW----------SPSGRSLI---FSRKKDGDTGSKLYSIDL 423
             D + + ++ +     +PT           SP GR +     +    G     L+ ID 
Sbjct: 509 VIDTATKSVIGQPILYGSPTEGPATNGVILASPDGRYVYTETLASGSGGVPTGTLWKIDT 568

Query: 424 NGRNETLINTPAYASDPQWVG 444
                  + +  Y S P    
Sbjct: 569 VAGTVQAVASGLYPSAPVLSP 589



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 46/261 (17%), Positives = 80/261 (30%), Gaps = 46/261 (17%)

Query: 220 SPNQQKVAYATYDDE------DILRVYLMDTRIDRA---PKRIGNFRSMILAP-----RF 265
           SP+ + V   T              VY +DTR +R    P  +G       +       F
Sbjct: 275 SPDGRTVYVVTTTISADGGSVPTSTVYGIDTRTNRPVGDPLAVGYVPQTGFSTTAKPLAF 334

Query: 266 SSNGKRALISVQKDEAM-----DIYSVDLQSNA----TERLTNTLFINISASYSPDSSQI 316
           S +GKR  +S     A       I  +D  S         L NT         SPD  ++
Sbjct: 335 SPDGKRVYVSSMSQGADGQLSGRIDVIDAASGQAAGAPVELVNTAA--TGLVVSPDGRRL 392

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            + ++ +    + V+    ++    +       F    SP G  +       +   + V 
Sbjct: 393 -YTANAD--STVTVIDLQHNNTPVAT--VPIGIFSGPGSPGGAPLDIVISQNDAQTVYVF 447

Query: 377 KKDGSQERLLVEDSNLQAP------------TWSPSGRSL----IFSRKKDGDTGSKLYS 420
                   +L   ++   P              SP G  L    +      G T S+   
Sbjct: 448 DYAERAVYVLDPATSTTDPDPVLVDGYPLAMALSPDGSRLFVNTMTFADASGSTTSQAGL 507

Query: 421 IDLNGRNETLINTPAYASDPQ 441
           + ++   +++I  P     P 
Sbjct: 508 VVIDTATKSVIGQPILYGSPT 528



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 16/174 (9%), Positives = 47/174 (27%), Gaps = 22/174 (12%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---SVQKDEA--MD 283
            +       + +           R+    ++      S +G+   +   ++  D      
Sbjct: 238 TSESAPSTTQPFAAAAAPSGVIDRVSLGDALPHTVVVSPDGRTVYVVTTTISADGGSVPT 297

Query: 284 IYSVDLQSNATERLTNTLFINISA-----------SYSPDSSQIVFESDREGKE-----Q 327
                + +     + + L +               ++SPD  ++   S  +G +     +
Sbjct: 298 STVYGIDTRTNRPVGDPLAVGYVPQTGFSTTAKPLAFSPDGKRVYVSSMSQGADGQLSGR 357

Query: 328 LYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           + V+ +          +    +    V SP G  +           I +   + 
Sbjct: 358 IDVIDAASGQAAGAPVELVNTAATGLVVSPDGRRLYTANADSTVTVIDLQHNNT 411



 Score = 36.9 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 15/105 (14%), Positives = 27/105 (25%), Gaps = 7/105 (6%)

Query: 220 SPNQQKVAYATY--DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--IS 275
           SP+ + V   T       +    L          +         AP  S +G R      
Sbjct: 540 SPDGRYVYTETLASGSGGVPTGTLWKIDTVAGTVQAVASGLYPSAPVLSPDGTRLYGPAV 599

Query: 276 VQKDEAMDIY---SVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              D    +              R+        + + SPD +++ 
Sbjct: 600 AVVDGQPQLAIGAVSTADGTMLTRIPIDTGSPTAVAVSPDGTRLY 644


>gi|313676967|ref|YP_004054963.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312943665|gb|ADR22855.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 618

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 19/136 (13%)

Query: 316 IVFESDREGK--EQLYVMQSNGSDQKRISQ----DKEASYFDPVWSPQGDLIAFT---KF 366
           + F   R G   E +Y  + +GS  + + +    + + +      S  G ++ FT   K 
Sbjct: 188 LYFTGQRTGSLAEGIYRAKLSGSQFQNVEKVPVINTKDNEGAAAISADGRVMVFTGCNKR 247

Query: 367 SG-EKFAIGVMKKDGSQERLLVE-DSNLQAPTW------SPSGRSLIFSRKKDGDTGSK- 417
            G     + +   +G + +       N+ +  W      S  GR LIFS  + G  G + 
Sbjct: 248 DGLGSCDLYISYFEGDEWQEPENLGGNINSSAWESQPFLSSDGRFLIFSSNRTGGFGKRD 307

Query: 418 -LYSIDLNGRNETLIN 432
             YS  +NG+    IN
Sbjct: 308 LYYSKKVNGKWTEAIN 323



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 62/166 (37%), Gaps = 22/166 (13%)

Query: 234 EDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISV--QKDEAM--DIYSVD 288
           E I R  L  ++     K  + N +    A   S++G+  + +   ++D     D+Y   
Sbjct: 200 EGIYRAKLSGSQFQNVEKVPVINTKDNEGAAAISADGRVMVFTGCNKRDGLGSCDLYISY 259

Query: 289 LQS---NATERL---TNTLFINISASYSPDSSQIVFESDREG----KEQLYVMQSNGSDQ 338
            +       E L    N+         S D   ++F S+R G    ++  Y  + NG   
Sbjct: 260 FEGDEWQEPENLGGNINSSAWESQPFLSSDGRFLIFSSNRTGGFGKRDLYYSKKVNGKWT 319

Query: 339 KRISQDKEASYFDPVWSP----QGDLIAFTKFSG---EKFAIGVMK 377
           + I+  K+ + F    SP      D + F+   G     F I  +K
Sbjct: 320 EAINLGKKINTFADEISPFLTLSNDEMYFSSNGGVGMGGFDIYKIK 365


>gi|168700422|ref|ZP_02732699.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 940

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 47/257 (18%), Positives = 82/257 (31%), Gaps = 42/257 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN   +      +      YL D +  R   ++    +      FS +GK  + +  
Sbjct: 403 ALSPNGSTLV-----EGHPHEAYLWDLKTGRVQHQLKFDGATTGNFLFSPDGKHLITAGN 457

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINIS-ASYSPDSSQIVFESDR---EGKEQLYVMQ 332
            D ++  +  D  +    + LT      +   + S D   +   S+        ++ V  
Sbjct: 458 DDPSVRFW--DTGTGKPSQVLTWNASSGVGRLAVSADGRWVAAVSNSHLLGTGTEVAVWD 515

Query: 333 SNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-- 388
                  R+    D         + P G L+     + E  A  V K D +  + L    
Sbjct: 516 QTVPGPARVMMLADGFGLSGAVAFGPGG-LLYVASQAEEGGATVVTKWDVTTGKQLARWA 574

Query: 389 --DSNLQAPT---WSPSGRSLIFSRK------KDGDTGSKL------------YSIDLNG 425
             D+    PT    SP G +L            D  TG+++             + D  G
Sbjct: 575 GPDAGAYGPTVVEVSPGGSTLAVGTYWGVIRLYDTRTGAEVGRPSSLPATVVGVAFDRTG 634

Query: 426 RNETLINTPAYASDPQW 442
           RN  +  + A  S+  W
Sbjct: 635 RNVRV--SGADGSNATW 649



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 72/215 (33%), Gaps = 25/215 (11%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             ++WD+   + +   +       ++  A    D       G+     +    V   V +
Sbjct: 743 SVQVWDLAAGEVVPNDQPTIDMTKFQWAA--FPD-------GKTLFLMNDERAVGYDVTT 793

Query: 187 GIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD------EDILRV 239
           G  + S  V D D     R     R  ++     SP+++ VA +   +      +    +
Sbjct: 794 GQERFSWAVADHDVLGRPRPEQAPRPNLVRAVAVSPDEKTVAISIGGEARLDASKQTHNL 853

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L++TR  +  +R+    +      FS +GK                 D  S    R   
Sbjct: 854 VLVETRTGKVIRRLPTPETSAEWLVFSPDGKHVA--------GPTCVWDAASLKEVRRFP 905

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +     +A++SPD   I       G   ++++  +
Sbjct: 906 SRPQVTAAAFSPDGKSIA-TGHANGTALVWLVSGD 939



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 33/259 (12%), Positives = 76/259 (29%), Gaps = 42/259 (16%)

Query: 187 GIIKNSLCVMDRDGANIRY-------LTPSRDQILFEPRF-------SPNQQKVAYATYD 232
                ++ V   DG+N  +       ++     I   P         S + + V     +
Sbjct: 631 DRTGRNVRVSGADGSNATWDAGTGALVSRRASPISLPPAGGAAPVVPSRDGRWVLTYALN 690

Query: 233 DED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +       R  L DT         G    +        +GK   + V+      +   DL
Sbjct: 691 ERGALLPWRAELWDTTTGERKHSGGIGGRVKELISV-PSGKHVAVLVESRIGRSVQVWDL 749

Query: 290 QSNATERLTNTLFIN-ISASYS--PDSSQIVFESDR--------EGKEQLYVMQSNG--- 335
            +       +   I+     ++  PD   +   +D          G+E+     ++    
Sbjct: 750 AAGEVVP-NDQPTIDMTKFQWAAFPDGKTLFLMNDERAVGYDVTTGQERFSWAVADHDVL 808

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFSGEKFAIGVMKKDGSQE--RLL 386
              +     +         SP    +A +         S +   + +++    +   RL 
Sbjct: 809 GRPRPEQAPRPNLVRAVAVSPDEKTVAISIGGEARLDASKQTHNLVLVETRTGKVIRRLP 868

Query: 387 VEDSNLQAPTWSPSGRSLI 405
             +++ +   +SP G+ + 
Sbjct: 869 TPETSAEWLVFSPDGKHVA 887


>gi|153008703|ref|YP_001369918.1| WD repeat-containing protein [Ochrobactrum anthropi ATCC 49188]
 gi|151560591|gb|ABS14089.1| WD-repeat family protein [Ochrobactrum anthropi ATCC 49188]
          Length = 324

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 69/199 (34%), Gaps = 17/199 (8%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           + GK   +     R +  T +D     +      + + +       V      +  V   
Sbjct: 55  VDGKSLITGGEDGR-VCRTDADGTVTELAKIPRKWMTAVAAGPGGTVGFASGRTAWVRTS 113

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG    +    +++ +    F+P  Q++A A Y+        L+ T     P  +  ++ 
Sbjct: 114 DGKVQEFA---QERSVEGIAFAPKGQRLAIARYNG-----ATLIWTGTAAKPVEL-EWKG 164

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +   FS +G+  + S+Q++ A+  +   L+     R+T         S+S  +  +  
Sbjct: 165 AHIGAIFSPDGRFLITSMQEN-ALHGWR--LEDTKHMRMTGYPAKVKDWSWSAKAKWLA- 220

Query: 319 ESDREGKEQLYVMQSNGSD 337
                G     V    G D
Sbjct: 221 ---TSGAPAAIVWPFAGKD 236



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 66/184 (35%), Gaps = 18/184 (9%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           L+   S +GK  +      E   +   D     TE          + +  P    + F S
Sbjct: 49  LSATVSVDGKSLI---TGGEDGRVCRTDADGTVTELAKIPRKWMTAVAAGP-GGTVGFAS 104

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            R      +V  S+G  Q+     +E S     ++P+G  +A  +++G      +     
Sbjct: 105 GRT----AWVRTSDGKVQE---FAQERSVEGIAFAPKGQRLAIARYNGATL---IWTGTA 154

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           ++   L          +SP GR LI S +++   G +L     + ++  +   PA   D 
Sbjct: 155 AKPVELEWKGAHIGAIFSPDGRFLITSMQENALHGWRL----EDTKHMRMTGYPAKVKDW 210

Query: 441 QWVG 444
            W  
Sbjct: 211 SWSA 214



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/98 (12%), Positives = 38/98 (38%), Gaps = 7/98 (7%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +++P   ++   +   G   ++     G+  K +  + + ++   ++SP G  +  +   
Sbjct: 130 AFAPKGQRLA-IARYNGATLIWT----GTAAKPVELEWKGAHIGAIFSPDGRFLITSMQE 184

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  +  +D    R+    + ++  +WS   + L 
Sbjct: 185 NALHGWRL--EDTKHMRMTGYPAKVKDWSWSAKAKWLA 220


>gi|146092531|ref|XP_001470319.1| activated protein kinase c receptor (LACK); p36 LACK protein;
           guanine nucleotide-binding protein beta subunit-like
           protein [Leishmania infantum]
          Length = 321

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 12/167 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + D R  +  ++       +LA  FS +  R ++S  +D  + +++V  +       
Sbjct: 97  SIRMWDLRNGQCQRKFLKHTKDVLAVAFSPD-DRLIVSAGRDNVIRVWNVAGECMHEFLR 155

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S  +SP     +  S       + V   NG   +R  +           SP 
Sbjct: 156 DGHEDWVSSICFSPSLEHPIVVSG-SWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPD 214

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPS 400
           G L A     G+  A  +      +   L +  N+++P     +SP+
Sbjct: 215 GSLCA---SGGKDGAALLWDLSTGE--QLFK-INVESPINQIAFSPN 255



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 17/163 (10%)

Query: 163 YQSITGEKGDFNSRILFV----SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           ++ +     D+ S I F        VVSG   N++ V + +G             +    
Sbjct: 151 HEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVT 210

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+    A             L D        +I N  S I    FS N     ++ ++
Sbjct: 211 VSPDGSLCA----SGGKDGAALLWDLSTGEQLFKI-NVESPINQIAFSPNRFWMCVATER 265

Query: 279 DEAMDIYSVDLQSNATE-RLTNT---LFINISASYSPDSSQIV 317
                +   DL+S A    LT         IS ++S D + + 
Sbjct: 266 S----LSVYDLESKAVIAELTPDGAKPSECISIAWSADGNTLY 304


>gi|85374800|ref|YP_458862.1| hypothetical protein ELI_09865 [Erythrobacter litoralis HTCC2594]
 gi|84787883|gb|ABC64065.1| hypothetical protein ELI_09865 [Erythrobacter litoralis HTCC2594]
          Length = 679

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 16/108 (14%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-----------QDKEASYFDPVWSPQG 358
           SPD S++ + +       +   + NGS  +++               + +     +SP G
Sbjct: 41  SPDGSRVAYTT--ASLPDILAGEDNGSTTQQLKIAYARDNLREFLPDDMNVSGIQFSPDG 98

Query: 359 DLIAFT-KFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRS 403
             I F      EK A+  +  DG   R L  VE + +++ +W+P    
Sbjct: 99  RWITFLWTKDDEKRAVWGIPVDGGAHRKLAAVEGAGVRSYSWAPDSSH 146



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 39/109 (35%), Gaps = 10/109 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--------FSSNG 269
             SP+  +VAY T    DIL      +   +              P         FS +G
Sbjct: 39  AVSPDGSRVAYTTASLPDILAGEDNGSTTQQLKIAYARDNLREFLPDDMNVSGIQFSPDG 98

Query: 270 KRALISVQKDEAMD-IYSVDLQSNATERLTNTLFINI-SASYSPDSSQI 316
           +       KD+    ++ + +   A  +L       + S S++PDSS +
Sbjct: 99  RWITFLWTKDDEKRAVWGIPVDGGAHRKLAAVEGAGVRSYSWAPDSSHM 147



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 41/116 (35%), Gaps = 15/116 (12%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN------------IS 306
            + +   S +G R   +       DI + +   + T++L      +              
Sbjct: 34  SVGSIAVSPDGSRVAYTTAS--LPDILAGEDNGSTTQQLKIAYARDNLREFLPDDMNVSG 91

Query: 307 ASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +SPD   I F   ++  K  ++ +  +G   ++++  + A      W+P    +
Sbjct: 92  IQFSPDGRWITFLWTKDDEKRAVWGIPVDGGAHRKLAAVEGAGVRSYSWAPDSSHM 147



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 39/312 (12%), Positives = 98/312 (31%), Gaps = 49/312 (15%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI---TGE 169
            G +              +       I+  +   S     KIA    D++ + +      
Sbjct: 35  VGSIAVSPDGSRVA----YTTASLPDILAGEDNGSTTQQLKIA-YARDNLREFLPDDMNV 89

Query: 170 KGD-FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV-- 226
            G  F+    +++        K ++  +  DG   R L       +    ++P+   +  
Sbjct: 90  SGIQFSPDGRWITFLWTKDDEKRAVWGIPVDGGAHRKLAAVEGAGVRSYSWAPDSSHMHL 149

Query: 227 ---------------------AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                                 Y      + L   ++   +D  P+ +      + + + 
Sbjct: 150 LVGAAEDKDREAESKDGFNARIYEEEQQLNRLFRAIIGAELDPEPQEVT-VPGYVTSFQI 208

Query: 266 SSNGKRALISVQKDEAMD-------IYSVDLQSNATERL--TNTLFINISASYSPDSSQI 316
           + N +  +I       +D       +  +D+ +     +  T     ++    SPD+SQ+
Sbjct: 209 AKNARTGVIETAPTTLIDDSYTQKKVNLLDMPTGNVRMVIETTGKIDDVE--ISPDASQL 266

Query: 317 VFESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +  +  +     ++ + +     +  +     +  D  + P G L+A     G +  
Sbjct: 267 ALIAAVDMNDPAATTIHFVDTATGTIRAHNAGAPEAVVDVEYMPDGRLVAAVHV-GAQSV 325

Query: 373 IGVMKKDGSQER 384
           + +  +DGS +R
Sbjct: 326 LRIHNRDGSLQR 337



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 18/112 (16%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-------------VEDSNLQA 394
           S      SP G  +A+T  +     I   + +GS  + L              +D N+  
Sbjct: 34  SVGSIAVSPDGSRVAYT--TASLPDILAGEDNGSTTQQLKIAYARDNLREFLPDDMNVSG 91

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
             +SP GR + F   KD D    ++ I ++G     +     A      W  
Sbjct: 92  IQFSPDGRWITFLWTKD-DEKRAVWGIPVDGGAHRKLAAVEGAGVRSYSWAP 142


>gi|302525112|ref|ZP_07277454.1| predicted protein [Streptomyces sp. AA4]
 gi|302434007|gb|EFL05823.1| predicted protein [Streptomyces sp. AA4]
          Length = 346

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 64/203 (31%), Gaps = 34/203 (16%)

Query: 257 RSMILAPRFSSNGKRALISVQKDE--------AMDIYSVDLQSNAT-------------E 295
                  R S +GKR   +V            +       L +                +
Sbjct: 148 PGTPSRARVSPDGKRVYWTVFVTGDSYAATGFSTRAGVYQLDNGELEKTIEELPVLVEGK 207

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           R  ++       ++S D  +       +GK  L     +    K + ++ E     P  S
Sbjct: 208 RYFSSDVNYWGITFSKDGKRFYSTLGSKGKTYLIEGDYDTYRGKALRENVE----CPSLS 263

Query: 356 PQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           P    IAF K  G   + + V+  +  +E  L E  ++          ++++        
Sbjct: 264 PDETRIAFKKKVGEGVWRLSVLDLETMRETALAETRSVDDQALWQDDHTILY------GL 317

Query: 415 GSKLYSI--DLNGRNETLINTPA 435
            + ++++  D +G    L++   
Sbjct: 318 ENAVWAVPADGSGAPRKLVSDAG 340



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 54/163 (33%), Gaps = 31/163 (19%)

Query: 301 LFINISASYSPDSSQIVFE-------------SDREGKEQLYVMQSNGSDQKRI------ 341
                 A  SPD  ++ +              S R G  QL     NG  +K I      
Sbjct: 148 PGTPSRARVSPDGKRVYWTVFVTGDSYAATGFSTRAGVYQL----DNGELEKTIEELPVL 203

Query: 342 -----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                    + +Y+   +S  G    F    G K    +++ D    R      N++ P+
Sbjct: 204 VEGKRYFSSDVNYWGITFSKDGKR--FYSTLGSKGKTYLIEGDYDTYRGKALRENVECPS 261

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            SP    + F +K  G+   +L  +DL    ET +       D
Sbjct: 262 LSPDETRIAFKKKV-GEGVWRLSVLDLETMRETALAETRSVDD 303


>gi|209738308|gb|ACI70023.1| WD repeat-containing protein 61 [Salmo salar]
          Length = 305

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 55/165 (33%), Gaps = 9/165 (5%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D +         +     +   FSP+ + +A  ++  +    V +      +    
Sbjct: 88  IRLWDLEFGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLGK----VNIFGVESGKKEYS 143

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      IL+  +S +GK    S   D  ++I+ +         L        S ++SPD
Sbjct: 144 LDTRGKFILSIAYSPDGKYLA-SGAIDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPD 201

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           S  +V  SD      + +     +          +   +  +SP 
Sbjct: 202 SQLLVTASD---DGYIKIYDVQHAKLAGTLSGHASWVLNVAFSPD 243



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 57/199 (28%), Gaps = 12/199 (6%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +++        +     SPN    A ++ D      + L D    +  K +         
Sbjct: 56  LQWTLEGHQLGIVSVDVSPNGAIAASSSLDA----HIRLWDLEFGKQIKSMDAGPVDAWT 111

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESD 321
             FS + K    +      ++I+ V+        L T   FI +S +YSPD   +     
Sbjct: 112 VAFSPDSKYIA-TGSHLGKVNIFGVE-SGKKEYSLDTRGKFI-LSIAYSPDGKYLA---S 165

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 + +            +          +SP   L+      G      V     +
Sbjct: 166 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAKLA 225

Query: 382 QERLLVEDSNLQAPTWSPS 400
              L    S +    +SP 
Sbjct: 226 G-TLSGHASWVLNVAFSPD 243



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 76/220 (34%), Gaps = 34/220 (15%)

Query: 102 DWNSLGAQV-LVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W   G Q+ +V+  V   G       L    RLWD++  KQI  K   + P     +A 
Sbjct: 57  QWTLEGHQLGIVSVDVSPNGAIAASSSLDAHIRLWDLEFGKQI--KSMDAGPVDAWTVA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D                   S+ + +G     + +   +     Y   +R + +  
Sbjct: 114 -FSPD-------------------SKYIATGSHLGKVNIFGVESGKKEYSLDTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             D  + IY V         L+      ++ ++SPD +  
Sbjct: 209 SDDGYIKIYDVQHA-KLAGTLSGHASWVLNVAFSPDDTHF 247



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 30/96 (31%), Gaps = 4/96 (4%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SP+ +     S       + +       Q +         +   +SP    IA     G 
Sbjct: 73  SPNGAIAASSSL---DAHIRLWDLEFGKQIKSMDAGPVDAWTVAFSPDSKYIATGSHLG- 128

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           K  I  ++    +  L      + +  +SP G+ L 
Sbjct: 129 KVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA 164


>gi|156388296|ref|XP_001634637.1| predicted protein [Nematostella vectensis]
 gi|156221722|gb|EDO42574.1| predicted protein [Nematostella vectensis]
          Length = 452

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 63/165 (38%), Gaps = 24/165 (14%)

Query: 232 DDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            + D   + L D  R       + +F     +  FS +G + ++S+  ++A+ +  +   
Sbjct: 86  HNRDFSSIRLWDLNRRQINTGFLADFPRSGRSCDFSPDG-QLVVSLFSEDALALVRM--- 141

Query: 291 SNATERLTNTLFINIS-----------ASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQ 338
              + R+T++  I +             +++PD S IV  S   G    + V+  N    
Sbjct: 142 --RSWRMTSSEVIQMRRIWRTRGSLLCCTFAPDGSSIVVVSRLTGDINHICVIDINSKKL 199

Query: 339 -----KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                  +S     +    ++SP G  ++ +  +G+   + +   
Sbjct: 200 VKKMNPALSSKFRGTIKSCIFSPDGLFLSISTSNGQLVVLDIQDL 244



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 13/124 (10%)

Query: 219 FSPNQQKVAYATYDDEDIL---RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           FSP+ Q V     +D   L   R + M +      +RI   R  +L   F+ +G   ++ 
Sbjct: 120 FSPDGQLVVSLFSEDALALVRMRSWRMTSSEVIQMRRIWRTRGSLLCCTFAPDGSSIVVV 179

Query: 276 VQKDEAMD-IYSVDLQSNATERLTN------TLFINISASYSPDSSQIVFESDREGKEQL 328
            +    ++ I  +D+ S    +  N            S  +SPD    +F S      QL
Sbjct: 180 SRLTGDINHICVIDINSKKLVKKMNPALSSKFRGTIKSCIFSPDG---LFLSISTSNGQL 236

Query: 329 YVMQ 332
            V+ 
Sbjct: 237 VVLD 240



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 60/184 (32%), Gaps = 29/184 (15%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATE------RLTNTLFINISAS------YSP 311
            F S+    L+S  K E       +   ++        R  NT F+           +SP
Sbjct: 63  SFPSDDDGVLLSASKVEQTTFLRHNRDFSSIRLWDLNRRQINTGFLADFPRSGRSCDFSP 122

Query: 312 DSSQIV--FESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKF- 366
           D   +V  F  D     ++   +   S+  ++        S     ++P G  I      
Sbjct: 123 DGQLVVSLFSEDALALVRMRSWRMTSSEVIQMRRIWRTRGSLLCCTFAPDGSSIVVVSRL 182

Query: 367 SGEKFAIGVMKKDGSQERLLVED-------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +G+   I V+  +  +    +           +++  +SP G  L  S         +L 
Sbjct: 183 TGDINHICVIDINSKKLVKKMNPALSSKFRGTIKSCIFSPDGLFLSISTSNG-----QLV 237

Query: 420 SIDL 423
            +D+
Sbjct: 238 VLDI 241



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 7/101 (6%)

Query: 344 DKEASYFDPVWSPQGDLIA--FTKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTW 397
           D   S     +SP G L+   F++ +     +   +   S+     R+     +L   T+
Sbjct: 110 DFPRSGRSCDFSPDGQLVVSLFSEDALALVRMRSWRMTSSEVIQMRRIWRTRGSLLCCTF 169

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +P G S++   +  GD    +  ID+N +       PA +S
Sbjct: 170 APDGSSIVVVSRLTGDIN-HICVIDINSKKLVKKMNPALSS 209


>gi|332711488|ref|ZP_08431419.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332349466|gb|EGJ29075.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 148

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 52/162 (32%), Gaps = 14/162 (8%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           M+     + +G+    S   D+ + +++   +      LT       S + SPD   I  
Sbjct: 1   MVNCVAITPDGQTIA-SASNDKTIRLWN-RRRYQQRSILTGHTGWVTSIAISPDGQTIAS 58

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     + + +   +             +      SP G+ +     +     + +   
Sbjct: 59  GS---ADKTVRLWNLHTEKPIFSLTGHSTAVLSIAISPDGETVVSASIN----EVKLWSL 111

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              +  LL   +     T+SP G+ L+      G    K++ 
Sbjct: 112 RTGE--LLRNLNGCYPVTFSPDGQILV---SGGGKGNIKIWR 148



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 55/151 (36%), Gaps = 14/151 (9%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ S     ++ + +R     R +       +     SP+ Q +A  + D      V L
Sbjct: 12  QTIASASNDKTIRLWNRRRYQQRSILTGHTGWVTSIAISPDGQTIASGSADK----TVRL 67

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +   ++    +    + +L+   S +G+  + +   +  +      L++    R  N  
Sbjct: 68  WNLHTEKPIFSLTGHSTAVLSIAISPDGETVVSASINEVKLW----SLRTGELLRNLNGC 123

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +      +SPD   +V      GK  + + +
Sbjct: 124 YPVT---FSPDGQILV---SGGGKGNIKIWR 148


>gi|301607540|ref|XP_002933364.1| PREDICTED: WD repeat-containing protein 17-like [Xenopus (Silurana)
           tropicalis]
          Length = 1315

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 70/197 (35%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P +   +A AT  +      ++ D 
Sbjct: 407 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGDLNCIAGATSKNGG----FIWDV 462

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +   R   + ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 463 KKGKMITRFNEHGKNGIFCISWSHKDSKRIA-TCSGDGFCIIRTID--GKVLHKY-KHPA 518

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 519 AVFGCDWSQNNKDMIATGCEDKNVRVYYLATSSDQPLKVFTGHTAKVFHVRWSPLREGIL 578

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 579 CSGSDDGTVRIWDYTQD 595


>gi|288919941|ref|ZP_06414263.1| WD-40 repeat protein [Frankia sp. EUN1f]
 gi|288348685|gb|EFC82940.1| WD-40 repeat protein [Frankia sp. EUN1f]
          Length = 333

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 57/311 (18%), Positives = 107/311 (34%), Gaps = 50/311 (16%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           LVTG V ++         RLWDV D          + P     + H     ++       
Sbjct: 41  LVTGSVDRKA--------RLWDVAD---------PAVPVLVAAVTHR--GRVHAVTCSPD 81

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYA 229
           G+          +      + +L  +    A I+       ++  +   F+P+ + +A  
Sbjct: 82  GE--------LLAAGGSDRRTTLWGIAAPEAPIQLAALDNQRMTVDAVAFAPDGRFLATT 133

Query: 230 TYDDEDI-----LRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEA 281
           +             V +       AP R+    +    +LA  FS +G     +   D  
Sbjct: 134 SGYRSRFSAVGDRAVTIWAVDDAAAPSRVSVLPAHQQPVLAAAFSPDGSMLA-TGCTDRT 192

Query: 282 MDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + ++ V     +  RL       +  S S+S D S +++ +  EG   L+ + ++ +   
Sbjct: 193 VRLWDV-RDVTSPRRLACADCESMIGSVSFSVDGS-LLYAAGFEGVT-LWDLGADVTAPV 249

Query: 340 RI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW- 397
           R+ +            +  G L+A     G K  +  +  D +  +   E S  +A  W 
Sbjct: 250 RLSTLPHRREVLAMAVTADGRLVA--STDGSKILLWDVS-DPAVPQKPEELSRSRAEVWS 306

Query: 398 ---SPSGRSLI 405
              SP GR L 
Sbjct: 307 LAFSPDGRLLA 317


>gi|224031505|gb|ACN34828.1| unknown [Zea mays]
          Length = 445

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 66/205 (32%), Gaps = 15/205 (7%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           T  D+   +        +  + F++ +  SG+    +           +     +  +  
Sbjct: 228 TYDDNAITNAVEIFNTSSGAVHFMASNNDSGVRYYDMERFQL------FKHFQFEWPVNH 281

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              SP+++ V        D     L+D    +    I   R    A  +S +G+    + 
Sbjct: 282 ASLSPDRKVVI-----VGDDPDGLLIDANSGKTVHSIKGHRDYSFASAWSPDGRTFA-TG 335

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D+   I+ V   S +   L   L    S  ++ D     F S  E  + +++      
Sbjct: 336 NQDKTCRIWDVRNLSKSVHVLRGNLGAIRSIRFTSDGQ---FMSMAEPADFVHIYDVKSD 392

Query: 337 DQKRISQDKEASYFDPVWSPQGDLI 361
             KR   D         +SP  D +
Sbjct: 393 YNKRQELDFFGEISGTSFSPDTDTL 417



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 18/138 (13%), Positives = 53/138 (38%), Gaps = 8/138 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDR 322
             S + K  ++     +  D   +D  S  T   +      + ++++SPD        ++
Sbjct: 283 SLSPDRKVVIV----GDDPDGLLIDANSGKTVHSIKGHRDYSFASAWSPDGRTFA-TGNQ 337

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +   +++ ++ N S    + +    +     ++  G  ++  + +     I  +K D ++
Sbjct: 338 DKTCRIWDVR-NLSKSVHVLRGNLGAIRSIRFTSDGQFMSMAEPAD-FVHIYDVKSDYNK 395

Query: 383 ERLLVEDSNLQAPTWSPS 400
            + L     +   ++SP 
Sbjct: 396 RQELDFFGEISGTSFSPD 413


>gi|121718872|ref|XP_001276221.1| small nucleolar ribonucleoprotein complex subunit (Pwp2), putative
           [Aspergillus clavatus NRRL 1]
 gi|119404419|gb|EAW14795.1| small nucleolar ribonucleoprotein complex subunit (Pwp2), putative
           [Aspergillus clavatus NRRL 1]
          Length = 902

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 85/234 (36%), Gaps = 22/234 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N  +        +     + + + +A+ +     +L V+   +      K+ G+  SM 
Sbjct: 285 FNPIHQLSVSQSNIDYVTVNKSGEWLAFGSSKHGQLL-VWEWQSE-SYILKQQGHLDSMN 342

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
            A  +S +G++ +++   D  + ++  D++S       T       +  ++   S ++F 
Sbjct: 343 -ALVYSPDGQK-VVTAADDGKVKVW--DVKSGFCIVTFTEHTSGVTACQFAKKGS-VLFT 397

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +  +G  + + +     + +  +     S+      P G+       S + F I V    
Sbjct: 398 ASLDGSVRAWDL-IRYRNFRTFTAPSRMSFSSLAVDPSGE--VVCAGSPDSFDIHVWSVQ 454

Query: 380 GSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
               +LL + S  + P     ++  G  L+      G     +    + GR +T
Sbjct: 455 TG--QLLDQLSGHEGPVSSLAFAADGNHLV-----SGSWDRTVRVWSIFGRTQT 501


>gi|308808712|ref|XP_003081666.1| Beta-transducin family (WD-40 repeat) protein (ISS) [Ostreococcus
           tauri]
 gi|116060131|emb|CAL56190.1| Beta-transducin family (WD-40 repeat) protein (ISS) [Ostreococcus
           tauri]
          Length = 1008

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 63/167 (37%), Gaps = 25/167 (14%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQ------SNATERLTNTLFINISASYSPDSSQIV 317
            FS  GK  L S  +D  + ++S++L+                   ++   +SP      
Sbjct: 690 AFSPCGKFLL-SASRDCHVRVWSMELKICLCAYEGHL-----HPIWDVQ--WSPFGYYFA 741

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             +  +   ++Y M +     +R+     ++     W P  + +A T  +     +  M 
Sbjct: 742 -TACHDRVARVYAMDAPF--PRRMFVGHLSNVDCIAWHPNVNYVA-TGSADRTLRLWEMS 797

Query: 378 KDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            DG   R+     + +++  +SP GR++       G    ++Y  DL
Sbjct: 798 -DGECVRVFAGHAAGVRSIAFSPDGRTIA-----SGADDGRVYLWDL 838



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 77/229 (33%), Gaps = 23/229 (10%)

Query: 155 AHTI--SDDIYQSITGEKGDFNSRILFV----SESVVSGIIKNSLCVMDRDGANIRYL-- 206
           AH +    D    +    G F   ++ V     E       K     +DRD    R +  
Sbjct: 617 AHGLLTCSDATADVKHVAGGFTDSVVRVWHLEEEDEDYKKYKKEKGPIDRDAKVARSIPM 676

Query: 207 --TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    + +  FSP  + +  A+ D    +RV+ M+ +I             I   +
Sbjct: 677 TEFVGHSAPVHQVAFSPCGKFLLSASRDCH--VRVWSMELKICLCAYEGHLHP--IWDVQ 732

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES-DR 322
           +S  G     +   D    +Y++D       R+      N+   ++ P+ + +   S DR
Sbjct: 733 WSPFGYYFA-TACHDRVARVYAMDAPF--PRRMFVGHLSNVDCIAWHPNVNYVATGSADR 789

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                L + + +  +  R+     A      +SP G  IA     G  +
Sbjct: 790 T----LRLWEMSDGECVRVFAGHAAGVRSIAFSPDGRTIASGADDGRVY 834


>gi|284990480|ref|YP_003409034.1| 40-residue YVTN family beta-propeller repeat-containing protein
           [Geodermatophilus obscurus DSM 43160]
 gi|284063725|gb|ADB74663.1| 40-residue YVTN family beta-propeller repeat protein
           [Geodermatophilus obscurus DSM 43160]
          Length = 370

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 68/215 (31%), Gaps = 9/215 (4%)

Query: 221 PNQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           P+ Q+   + +D    +  V ++D         I   R    A   S++G+R  + V   
Sbjct: 135 PDGQRAFVSVHDAGAGVNAVVVLDVASGTVVDAIRTGRGPHTA-AVSADGERVYVPVSLG 193

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             +D   +D ++       +T     +     D  ++ + +D      + V+     D  
Sbjct: 194 GHLD--VLDARTGVQVGHLDTTPNPRAVVLGADG-RLAYVADPV-ASVVSVLDVATGDVA 249

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                    +     SP G  +A    +GE  ++           +    ++ Q   ++P
Sbjct: 250 ATIPVGSGPHALAA-SPDGTRVAVVGQAGEDVSLIDTATQTVVTTVPGVGASPQHVAYAP 308

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            GR L       GD    +           +   P
Sbjct: 309 DGRHLY--TADAGDGTVSVVDTATGSVTARVPTGP 341



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 34/97 (35%), Gaps = 5/97 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  +VA      ED+  +      +      +G     +    ++ +G+    +   D
Sbjct: 264 SPDGTRVAVVGQAGEDVSLIDTATQTVVTTVPGVGASPQHV---AYAPDGRHLYTADAGD 320

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             +    VD  + +      T     S +  PD S++
Sbjct: 321 GTVS--VVDTATGSVTARVPTGPTPTSVAVLPDGSRV 355


>gi|270296172|ref|ZP_06202372.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270273576|gb|EFA19438.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 375

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 59/190 (31%), Gaps = 15/190 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALIS 275
           FSP+ + +    +  + ILR  +                     PR   FS NGK A + 
Sbjct: 178 FSPDGKYIFATDFSADRILRFVMHPDNPIPHASLEAVGIEADSGPRHLTFSPNGKFAYLI 237

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YSPDSSQIVFESDR---EGKE 326
            +    +  +S D      E++       ++A        SPD   + + S+R   +G  
Sbjct: 238 TELSGKVIAFSYD--DGCLEQIQTITADTVAARGSADIHLSPDGKYL-YASNRLKEDGIA 294

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
              V   NG+  K   Q       +   +P G  +           +    +        
Sbjct: 295 IFAVNPENGTLAKVGYQPTGIHPRNFNITPNGKYLLAACRDSNVIQVYKRNEVTGLLEDT 354

Query: 387 VEDSNLQAPT 396
            +D  +  P 
Sbjct: 355 HQDIVVDMPV 364



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 75/234 (32%), Gaps = 39/234 (16%)

Query: 220 SPNQQKV-AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGKRALISVQ 277
           S + + V A +  +D       L   R     + +    +    P + ++NG+  L +  
Sbjct: 74  SGDGEFVYAVSEMNDSTAALSSLSLDRETGELRLLNTVPTFGADPCYVATNGREVLTANY 133

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-------------SYSPDSSQIVFESDREG 324
               M ++ +          T                       +SPD   I F +D   
Sbjct: 134 SGGTMSVFPLQKDGTLAPADTLFQGSATGPDAIRQATPHIHCTVFSPDGKYI-FATDFSA 192

Query: 325 KEQL-YVMQSN---------------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
              L +VM  +                S  + ++      +   +    G +IAF+   G
Sbjct: 193 DRILRFVMHPDNPIPHASLEAVGIEADSGPRHLTFSPNGKFAYLITELSGKVIAFSYDDG 252

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               I  +  D    R     +++     SP G+ L ++  +  + G  +++++
Sbjct: 253 CLEQIQTITADTVAAR---GSADIHL---SPDGKYL-YASNRLKEDGIAIFAVN 299



 Score = 43.1 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 64/191 (33%), Gaps = 33/191 (17%)

Query: 266 SSNGKRALISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD- 321
           S +G+      + +++       S+D ++     L           Y   + + V  ++ 
Sbjct: 74  SGDGEFVYAVSEMNDSTAALSSLSLDRETGELRLLNTVPTFGADPCYVATNGREVLTANY 133

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYF------------DPVWSPQGDLIAFTKFSGE 369
             G   ++ +Q +G+     +  + ++                V+SP G  I  T FS +
Sbjct: 134 SGGTMSVFPLQKDGTLAPADTLFQGSATGPDAIRQATPHIHCTVFSPDGKYIFATDFSAD 193

Query: 370 KFAIGVMKKD------GSQERLLVEDSNLQAPTWSPSGRS-----------LIFSRKKDG 412
           +    VM  D        +   +  DS  +  T+SP+G+            + FS     
Sbjct: 194 RILRFVMHPDNPIPHASLEAVGIEADSGPRHLTFSPNGKFAYLITELSGKVIAFSYDDGC 253

Query: 413 DTGSKLYSIDL 423
               +  + D 
Sbjct: 254 LEQIQTITADT 264


>gi|123424969|ref|XP_001306699.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121888288|gb|EAX93769.1| hypothetical protein TVAG_286080 [Trichomonas vaginalis G3]
          Length = 356

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 4/101 (3%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           Q  +  +    +SP   +IA    SG    +    +              +   WSP G+
Sbjct: 50  QSHQDPFLACAFSPNSQIIASCTNSGNVI-LWNTNQTTEITTFKAHSQIARTICWSPDGQ 108

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +        D  + ++S++   +  TL     +  D +W+
Sbjct: 109 YIATGSN---DKTAAIWSMNRYTKRHTLTAMNGWVRDIKWL 146



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 6/92 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSPN Q +A  T    +   V L +T              +     +S +G+    +  
Sbjct: 60  AFSPNSQIIASCT----NSGNVILWNTNQTTEITTFKAHSQIARTICWSPDGQYIA-TGS 114

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            D+   I+S++  +     LT          +
Sbjct: 115 NDKTAAIWSMNRYTKRHT-LTAMNGWVRDIKW 145


>gi|73994653|ref|XP_862417.1| PREDICTED: similar to WD repeat and SOCS box containing protein 2
           (WSB-2) (CS box-containing WD protein) isoform 2 [Canis
           familiaris]
          Length = 268

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 20/135 (14%), Positives = 52/135 (38%), Gaps = 3/135 (2%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           ++ + + +       +   + ++    F+ +G   L+S  +D+ + I+ ++      + L
Sbjct: 136 QIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVL 195

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +  L      S SPD S +       G++ +++         R  +  ++S     +SP 
Sbjct: 196 SGHLQWVYCCSISPDCSMLC---SAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPD 252

Query: 358 GDLIAFTKFSGEKFA 372
             L+    +     A
Sbjct: 253 SALLVTASYDTNPHA 267



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 72/247 (29%), Gaps = 41/247 (16%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYAT------------------YDDEDILRVYLM 242
                         +   FSP+    A++                      E   R    
Sbjct: 18  GRPHQFDWKSSCETWSVAFSPDGSWFAWSQGHCIVKLIPWPLEEQFIPKGFEAKSRSSKN 77

Query: 243 DTRIDRAPKRIGN-----FRSMILAPRFSSNGKR---------------ALISVQKDEAM 282
           DT+   +PK            +  +P  S   ++                L +   D  +
Sbjct: 78  DTKGRGSPKEKTLDCGQIVWGLAFSPWPSPPSRKLWARHHPQVPDISCLILATGLNDGQI 137

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ V         L+    +    S++P  S I+  + R+   +++ +  +G   + +S
Sbjct: 138 KIWEVQ-TGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLS 196

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                  +    SP   ++         F +  M+      +L    S++ +  +SP   
Sbjct: 197 -GHLQWVYCCSISPDCSMLCSAAGEKSVF-LWSMRSYTLIRKLEGHQSSVVSCDFSPDSA 254

Query: 403 SLIFSRK 409
            L+ +  
Sbjct: 255 LLVTASY 261


>gi|1749702|dbj|BAA13908.1| unnamed protein product [Schizosaccharomyces pombe]
          Length = 310

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 76/222 (34%), Gaps = 20/222 (9%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS-RDQILFEPRFSP 221
           +Q +       +  I   +  VVSG    ++ + +  G     +T       +   RFSP
Sbjct: 95  HQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIGYCKYTITDGGHSDWVSCVRFSP 154

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N   + + +   E  ++ +  D                + A   S +G     S  +D  
Sbjct: 155 NPDNLTFVSVGWEKPVKAW--DLETFSLRTSHYGHTGYVSAVTISPDGSLCA-SGGRDGT 211

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPD---------SSQIVFESDREGKEQLYVMQ 332
           + ++ ++ +S     L     IN    +SPD         SS  +F+ + + K     + 
Sbjct: 212 LMLWDLN-ESTHLYSLEAKANINA-LVFSPDRYWLCAATGSSIRIFDLETQEKVDELTVD 269

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             G  +K      E       WSP G  + F+ ++     + 
Sbjct: 270 FVGVGKK----SSEPECISLTWSPDGQTL-FSGWTDNLIRVW 306



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 43/263 (16%), Positives = 86/263 (32%), Gaps = 30/263 (11%)

Query: 160 DDIYQSITGEKGDFNSRIL------FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           DD+   +   +   +S  +      F S   +S     ++   D +     +        
Sbjct: 44  DDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDKTIRWWDLEKGECTHQFVGHTSD 103

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +     SP+ ++V   + D    ++++ +     +     G     +   RFS N     
Sbjct: 104 VLSVSISPDNRQVVSGSRD--KTIKIWNI-IGYCKYTITDGGHSDWVSCVRFSPNPDNLT 160

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGKEQLYV 330
                 E       DL++ +    T+         + + SPD S       R+G   L+ 
Sbjct: 161 FVSVGWEKPVKAW-DLETFSLR--TSHYGHTGYVSAVTISPDGSLCA-SGGRDGTLMLWD 216

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-- 388
           +          S + +A+    V+SP    +     +G    I  ++     + L V+  
Sbjct: 217 LN---ESTHLYSLEAKANINALVFSPDRYWL--CAATGSSIRIFDLETQEKVDELTVDFV 271

Query: 389 --DSNLQAP-----TWSPSGRSL 404
                   P     TWSP G++L
Sbjct: 272 GVGKKSSEPECISLTWSPDGQTL 294


>gi|328772197|gb|EGF82236.1| hypothetical protein BATDEDRAFT_36759 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 298

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 83/255 (32%), Gaps = 13/255 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            E G +           V+G + +++ V + +  ++ +        +     SP+     
Sbjct: 13  HEDGIWTIACSRRGNKFVTGSVDDTVKVWNAESMSLMHTLEGHQLGVNSVDISPSGAYAV 72

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D     ++ + D       K I        +  FS +G++   +   +  ++ ++V
Sbjct: 73  STSLDS----QIRIWDLVSHSLVKSIEAGPVKAWSVAFSPDGRQIS-TGTHNGNINCWTV 127

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +         T   F+ +S +YSP+   +   ++      +++                 
Sbjct: 128 ETGEKDRTLETRGKFV-MSLAYSPNGILLASGAE---NGSIHIFDVPTGKLLHSLPGHSM 183

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +     +S    L+  T     +  I  +        L    S + +   SP+     F+
Sbjct: 184 AIRSMTFSTDSQLLI-TASDDRRINIYDVHHANCLSTLSGHQSWVLSVAVSPNTTH--FA 240

Query: 408 RKKDGDTGSKLYSID 422
                D   K++ I+
Sbjct: 241 SGSS-DKRVKVWDIN 254


>gi|299139259|ref|ZP_07032435.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
 gi|298598939|gb|EFI55101.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
          Length = 680

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 4/89 (4%)

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVEDSN--LQAP 395
           R     E        SP G  ++F K       I V K D   S  R +  ++   ++  
Sbjct: 30  RQMFFGEVQIAGAQISPDGQYLSFLKPYKGTRNIWVKKADEPFSAARPVSAEATRPIRGY 89

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            WS   + +++S+   GD    +Y+ID  
Sbjct: 90  FWSRDSKYILYSQDAAGDENFNIYAIDPT 118



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 30/79 (37%), Gaps = 4/79 (5%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASYFDPVWSPQGDLIA 362
             A  SPD   + F    +G   ++V +++   S  + +S +         WS     I 
Sbjct: 40  AGAQISPDGQYLSFLKPYKGTRNIWVKKADEPFSAARPVSAEATRPIRGYFWSRDSKYIL 99

Query: 363 FTKFS--GEKFAIGVMKKD 379
           +++ +   E F I  +   
Sbjct: 100 YSQDAAGDENFNIYAIDPT 118


>gi|299135418|ref|ZP_07028608.1| 40-residue YVTN family beta-propeller repeat protein [Afipia sp.
           1NLS2]
 gi|298589826|gb|EFI50031.1| 40-residue YVTN family beta-propeller repeat protein [Afipia sp.
           1NLS2]
          Length = 484

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 80/230 (34%), Gaps = 15/230 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+  +V + T   ED ++V    T  ++   +  N   M +   FS +GK   +    
Sbjct: 134 FTPDGGEV-WVTVRGEDYVQVLDGKTFEEKTRIKTPNGPGMQI---FSPDGKYGYVCSSF 189

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   ++ SV        R+          + +PD SQ+ F     GK Q++  +   +  
Sbjct: 190 NPETEVISV-ADHQIIARVKQASPFCPDIAATPDGSQVWFTLKDIGKTQVFNAKPPFNVL 248

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW- 397
             +      ++ +   +  G   A+    G    + V + D  ++   +   NL    W 
Sbjct: 249 ATLDTGPTTNHVNFAHNANGTF-AYVTI-GGLNEVKVFRTDDFKQVAAIPVGNLPHGLWP 306

Query: 398 SPSGRSLIF-------SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           S  G  +             D  T   + ++ +    + +   P    + 
Sbjct: 307 SGDGSRIYVGLENADALAAIDTLTNKVIANVPIGQAPQAITYVPGAVPEG 356



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 65/184 (35%), Gaps = 12/184 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+++ +A  +     +  +    T   +    +G          F+ +G    ++V+ 
Sbjct: 92  FSPDRKTLAVVSIGSNSVTFIDT-ATNTVKHTTYLGRSPHEAF---FTPDGGEVWVTVR- 146

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                +  +D ++   +    T        +SPD       S    + ++  +    +D 
Sbjct: 147 -GEDYVQVLDGKTFEEKTRIKTPNGPGMQIFSPDGKYGYVCSSFNPETEVISV----ADH 201

Query: 339 KRISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           + I++ K+AS F P    +P G  + FT     K  +   K   +    L          
Sbjct: 202 QIIARVKQASPFCPDIAATPDGSQVWFTLKDIGKTQVFNAKPPFNVLATLDTGPTTNHVN 261

Query: 397 WSPS 400
           ++ +
Sbjct: 262 FAHN 265


>gi|255086143|ref|XP_002509038.1| predicted protein [Micromonas sp. RCC299]
 gi|226524316|gb|ACO70296.1| predicted protein [Micromonas sp. RCC299]
          Length = 800

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 65/218 (29%), Gaps = 59/218 (27%)

Query: 265 FSSNGKRA--LISVQKDEAMDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFES 320
           +S +G     L S       ++Y+ D+++ A   L           A   PD  ++    
Sbjct: 20  WSPDGALLGNLFSPNGTLVRNLYAYDVRAGAQRLLATPAREAYADEARL-PDEEKL---- 74

Query: 321 DREGKEQL--------YVMQSNGSDQKRI----------------------SQDKEASYF 350
            RE   +L        +  +    + +R+                      S D  A+  
Sbjct: 75  RRERTRELGLGVTRFEWASRRAKGEARRLLVPQSDAGGDKLAASEPRLVVDSGDNGAAVL 134

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--------VEDSNLQA-------- 394
           D   SP G  +AF +    + A  V+       R+               +         
Sbjct: 135 DAKLSPDGKWVAFVREKEIRVAPDVVSDALPSARVTFGAYGRDATTHGLAEFIAAEEMDR 194

Query: 395 ---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                WSP GR + F+R   G     L     +G +E 
Sbjct: 195 PEGYWWSPDGRKIAFARVDAGTVTPYLIE-RADGSSER 231



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 72/222 (32%), Gaps = 36/222 (16%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA--SWRKIAHTIS 159
            W+  GA   + G +       L      +DV+       ++  ++PA  ++   A  + 
Sbjct: 19  QWSPDGA---LLGNLF-SPNGTLVRNLYAYDVRAG----AQRLLATPAREAYADEA-RLP 69

Query: 160 DD--IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG-----ANIRYLTPSRDQ 212
           D+  + +  T E G   +R  + S        +  +   D  G     +  R +  S D 
Sbjct: 70  DEEKLRRERTRELGLGVTRFEWASRRAKGEARRLLVPQSDAGGDKLAASEPRLVVDSGDN 129

Query: 213 --ILFEPRFSPNQQKVAYATYDDEDILRVYLMD------TRIDRAPKRIGNFRSMILAPR 264
              + + + SP+ + VA+    +  +    + D             +             
Sbjct: 130 GAAVLDAKLSPDGKWVAFVREKEIRVAPDVVSDALPSARVTFGAYGRDATTHGLAEFIAA 189

Query: 265 ----------FSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
                     +S +G++   +      +  Y ++    ++ER
Sbjct: 190 EEMDRPEGYWWSPDGRKIAFARVDAGTVTPYLIERADGSSER 231


>gi|148613343|gb|ABQ96217.1| intraflagellar transport protein 80 [Chlamydomonas reinhardtii]
          Length = 765

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 17/162 (10%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           +R  R  K I   +   ++ R+S +G     +  +D ++ I+S +        L      
Sbjct: 91  SRTGRVEKSIEGHKGACISLRWSYDGTALA-TAGEDGSVKIWSRN--GMLRSTLAQADSP 147

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S  ++ D  Q+ + +       + +   + + ++   +  +       WSP   LI  
Sbjct: 148 VYSIVWAYDCDQLCYCT----GSNVVIKSLSSNAKQNAWKAHDGVVLKVDWSPINHLII- 202

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSG 401
               GE     V    G   RLL +      P     W+PSG
Sbjct: 203 --TGGEDCKYKVWDSFG---RLLFQSGLFDYPVTSVAWAPSG 239


>gi|119385222|ref|YP_916278.1| cytochrome d1, heme region [Paracoccus denitrificans PD1222]
 gi|119374989|gb|ABL70582.1| cytochrome d1, heme region [Paracoccus denitrificans PD1222]
          Length = 484

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 85/237 (35%), Gaps = 35/237 (14%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           Q   +P F+ +   +       +  + V  +D        R     ++   P+FS +G R
Sbjct: 115 QPAEKPVFAADPLNITLVVETGDHHVSV--LDGDTFEVLARFATPFAVHGGPKFSPDG-R 171

Query: 272 ALISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +  + +D      DI+S+  +        N+  I    + SPD  +I   +     E L
Sbjct: 172 FVYIMSRDGWVQKYDIWSL-AEVGRIRAALNSRNI----AISPDGQRIAVANYL--PESL 224

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK---------D 379
            ++ S+ +  + I+   +        +P      +       F + +            D
Sbjct: 225 TILDSDLNPLRLIATQVDG-------TPSRVSAVYQAPQRHSFVLALKDAPEIWEVATTD 277

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPA 435
            S  R+ +++       +SP  R LI    +DGD G    +IDL +G     +  P 
Sbjct: 278 LSIRRIPIDEPLDDF-FFSPDYRQLI-GANRDGDKG---VAIDLDDGHKVAELPLPG 329



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 48/276 (17%), Positives = 98/276 (35%), Gaps = 21/276 (7%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            EK  F +  L ++  V +G    S  V+D D   +     +   +   P+FSP+  +  
Sbjct: 117 AEKPVFAADPLNITLVVETGDHHVS--VLDGDTFEVLARFATPFAVHGGPKFSPDG-RFV 173

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y    D  + +  +         +   N R++ +    S +G+R  ++    E++ I   
Sbjct: 174 YIMSRDGWVQKYDIWSLAEVGRIRAALNSRNIAI----SPDGQRIAVANYLPESLTILDS 229

Query: 288 DLQSNATERLTNTLFINISASYSP---DSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           DL      RL  T      +  S       +  F    +   +++ + +     +RI  D
Sbjct: 230 DL---NPLRLIATQVDGTPSRVSAVYQAPQRHSFVLALKDAPEIWEVATTDLSIRRIPID 286

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS---NLQAPTWSPSG 401
           +    F   +SP    +      G+K  + +   DG +   L            TW   G
Sbjct: 287 EPLDDFF--FSPDYRQLIGANRDGDK-GVAIDLDDGHKVAELPLPGMPHLGSGITWERDG 343

Query: 402 RSLIFSRKKDGDTGSKLYSI-DLNGRNETLINTPAY 436
           R ++ +    G+    +  + D +   +   + P +
Sbjct: 344 RRVM-ATPHLGEGVLSVIDMQDWSLVKQIKTSGPGF 378



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 49/147 (33%), Gaps = 19/147 (12%)

Query: 302 FINISASYSPDSSQIVFESD--------REGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              ++  Y P + + VF +D          G   + V+  +  +         A +  P 
Sbjct: 107 SREMNPDYQP-AEKPVFAADPLNITLVVETGDHHVSVLDGDTFEVLARFATPFAVHGGPK 165

Query: 354 WSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +SP G  +      G  +K+ I  + + G     L    N +    SP G+ +  +    
Sbjct: 166 FSPDGRFVYIMSRDGWVQKYDIWSLAEVGRIRAAL----NSRNIAISPDGQRIAVANY-- 219

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYAS 438
                 L  +D +     LI T    +
Sbjct: 220 --LPESLTILDSDLNPLRLIATQVDGT 244


>gi|113475094|ref|YP_721155.1| peptidase S9, prolyl oligopeptidase active site region
           [Trichodesmium erythraeum IMS101]
 gi|110166142|gb|ABG50682.1| peptidase S9, prolyl oligopeptidase active site region
           [Trichodesmium erythraeum IMS101]
          Length = 644

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 81/273 (29%), Gaps = 46/273 (16%)

Query: 193 LCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           L  +  DG N+ ++   PS        R++P+ +     T        V           
Sbjct: 26  LSSITIDGNNVYWIEGRPSEGGRNVIVRYTPDGK----TTDITPSPFNVRTRVHEYGGGS 81

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASY 309
             + +                   S  KD+ +   +        + LT +  +    A  
Sbjct: 82  FLVAD--------------DTIYFSNFKDQRLYRQT---PGTEPQPLTPSADLRYADAVI 124

Query: 310 SPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
                +++        D E   ++  +     +  ++  +    Y  P  SP G  + + 
Sbjct: 125 DKQRDRLICVQEDHTKDGEPTNRIVSINLKNGEDIQVLAEGYDFYASPRLSPDGSTLCWI 184

Query: 365 KFS-------GEKFAIGVMKKDG-SQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGD 413
            ++       G +  +  +  DG   E   V     ++   P WSP G  L F   +   
Sbjct: 185 SWNHPNMPWDGTELWVAQVNTDGLLDENKFVAGGKEESIFQPQWSPDG-MLCFVSDRS-- 241

Query: 414 TGSKLYSIDLNGRNE---TLINTPAYASDPQWV 443
               +Y +           L +  A    PQW+
Sbjct: 242 LWWNIYQVSGITDKVNLDILYSLNAEFGVPQWL 274


>gi|320036624|gb|EFW18563.1| eukaryotic translation initiation factor 2A [Coccidioides posadasii
           str. Silveira]
          Length = 720

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 18/183 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++  S   + +L ++  +G + R +   ++  + +  +SPN ++             V
Sbjct: 247 VDKTGKSYYGETTLYLLSTNGFDSR-IDLDKEGPIHDVTWSPNSKEFGVVYGYMPAKTTV 305

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  LAPR    FS +G+  +++   + A  +   DL+ N T+
Sbjct: 306 FN---------SRGAATHSFPLAPRNTIVFSPHGRFVIVAGFGNLAGQMDIYDLEKNYTK 356

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             T          +SPD   I     S R   +    +   G     +  +     +D  
Sbjct: 357 VATVEASNASVCEWSPDGKHILTATTSPRLRVDNGVRIWHVGGGL--MYNEDMNELYDVH 414

Query: 354 WSP 356
           W P
Sbjct: 415 WRP 417



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 69/222 (31%), Gaps = 24/222 (10%)

Query: 218 RFSPNQQK--VAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALI 274
             SP Q      +          V + +      P  +   F+   +  +++ +G   ++
Sbjct: 182 AISPGQNHTVAVFIPERKGQPASVKVFNVPQFNLPLSQKNFFKGDKVQMKWNKSGTTLIV 241

Query: 275 SVQKD---------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--VFESDRE 323
             Q +             +Y +      +    +        ++SP+S +   V+     
Sbjct: 242 LAQTEVDKTGKSYYGETTLYLLSTNGFDSRIDLDKEGPIHDVTWSPNSKEFGVVY----- 296

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G         N       S    A     V+SP G  +    F      + +   + +  
Sbjct: 297 GYMPAKTTVFNSRGAATHSF-PLAPRNTIVFSPHGRFVIVAGFGNLAGQMDIYDLEKNYT 355

Query: 384 RLLV-EDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
           ++   E SN     WSP G+ ++ +        D G +++ +
Sbjct: 356 KVATVEASNASVCEWSPDGKHILTATTSPRLRVDNGVRIWHV 397


>gi|315498250|ref|YP_004087054.1| peptidase s9b dipeptidylpeptidase iv domain protein [Asticcacaulis
           excentricus CB 48]
 gi|315416262|gb|ADU12903.1| peptidase S9B dipeptidylpeptidase IV domain protein [Asticcacaulis
           excentricus CB 48]
          Length = 780

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/187 (13%), Positives = 54/187 (28%), Gaps = 17/187 (9%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVD 288
            D +  +   +   R    P  +        A  +  + +    +  +       +   D
Sbjct: 269 IDIDRPVLFDVAKRRRIEIPTDLFPNPMTTNALSWRKDSRGVRFAYDQRGHRLYRLIEAD 328

Query: 289 LQSNATERLTNTLF---INI-SASYSPD----SSQIVFESDREGKEQLYVMQSNGSDQK- 339
             +     +        IN  S  YS D      ++++ S+R+G   LY+  +     K 
Sbjct: 329 AATGQARVVAEDRSDTFINTYSRRYSYDVGGEGRELIWMSERDGWNHLYLYDATTGKVKT 388

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQ 393
           +I++ +           +   I F      K           +  DG     L   +   
Sbjct: 389 QITKGEYVVRQVLKVDDKARQIYFAANGMRKGEDPYFQHYYRIDFDGRNLTPLTTAAAWH 448

Query: 394 APTWSPS 400
             ++S  
Sbjct: 449 DVSFSSD 455



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 77/247 (31%), Gaps = 37/247 (14%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFS 266
           +      P+ SP+ Q +A+     +D   V       +     I   + +   P   ++S
Sbjct: 168 KSPADNTPKPSPDGQWLAFV----QDFNLVIRRKVGGEIMRLSIDGTQGLFYDPESIQWS 223

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            + ++ +    +                 R+ ++    +           ++    +  +
Sbjct: 224 PDSQKIVAFRVQPGFR---------REVVRVISSPSDQVQPKVD----VQLYPKPGDAID 270

Query: 327 QLYVMQSNGSDQKRI-----SQDKEASYFDPVWSPQ--GDLIAFTKFSGEKFAIGVMKKD 379
               +  + + ++RI           +     W     G   A+ +     + +      
Sbjct: 271 IDRPVLFDVAKRRRIEIPTDLFPNPMTTNALSWRKDSRGVRFAYDQRGHRLYRLIEADAA 330

Query: 380 GSQERLLVEDS-----NLQAPTWSPS----GRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             Q R++ ED      N  +  +S      GR LI+  ++DG     LY     G+ +T 
Sbjct: 331 TGQARVVAEDRSDTFINTYSRRYSYDVGGEGRELIWMSERDGWNHLYLYDA-TTGKVKTQ 389

Query: 431 INTPAYA 437
           I    Y 
Sbjct: 390 ITKGEYV 396



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 56/159 (35%), Gaps = 18/159 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL----APRFSSN----G 269
            +  + + V +A       L   +         + +   RS       + R+S +    G
Sbjct: 302 SWRKDSRGVRFAYDQRGHRLYRLIEADAATGQARVVAEDRSDTFINTYSRRYSYDVGGEG 361

Query: 270 KRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINIS-ASYSPDSSQIVFESD--REGK 325
           +  +   ++D    +Y  D  +     ++T   ++          + QI F ++  R+G+
Sbjct: 362 RELIWMSERDGWNHLYLYDATTGKVKTQITKGEYVVRQVLKVDDKARQIYFAANGMRKGE 421

Query: 326 ----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +  Y +  +G +   ++    A++ D  +S     
Sbjct: 422 DPYFQHYYRIDFDGRNLTPLTTA--AAWHDVSFSSDMQY 458



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 20/116 (17%)

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---E 388
           + +      +   K  +   P  SP G  +AF +     F + + +K G +   L     
Sbjct: 155 RQDRGFSGVVRDLKSPADNTPKPSPDGQWLAFVQ----DFNLVIRRKVGGEIMRLSIDGT 210

Query: 389 DSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                 P    WSP  + ++  R + G     +           +I++P+    P+
Sbjct: 211 QGLFYDPESIQWSPDSQKIVAFRVQPGFRREVV----------RVISSPSDQVQPK 256


>gi|297204233|ref|ZP_06921630.1| secreted protein [Streptomyces sviceus ATCC 29083]
 gi|197714075|gb|EDY58109.1| secreted protein [Streptomyces sviceus ATCC 29083]
          Length = 405

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 77/258 (29%), Gaps = 29/258 (11%)

Query: 204 RYLTPSRDQILFEPRF---SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           R +  SR      P      P  + +  A Y    +    +  +    A +      S  
Sbjct: 138 RKVLGSRSTGGAGPCHLSVHPGGRWLLSANYGSGSVAVHPIDPSGALGALRDSVTHSSPA 197

Query: 261 LAP--------RF--SSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINIS 306
             P        +F  S +G   L      + +  Y +D ++ A + +    T        
Sbjct: 198 PGPGQEGPHAHQFLTSPDGGHVLAVDLGTDTVYSYRLDERTGALQEVSRARTRAGAGPRH 257

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGS----DQKRISQDKEASYFDPVW--SPQGDL 360
            ++ P        ++ +    +               + +     + +   +  +  G  
Sbjct: 258 LTFHPGGRYAYLANEVDNTVAVCAYDRKTGRVSVGAPQSTGTGSGTNYPAQFLVTANGSY 317

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAP---TWSPSGRSLIFSRKKDGDTGS 416
                          ++  G++ RLL     +   P    +SP GR L+F+  +   T S
Sbjct: 318 AYLANRGDNSLTRYAVEGGGARLRLLDTVPVHGDFPRQIAFSPDGR-LLFAANQRSGTVS 376

Query: 417 KLYSIDLNGRNETLINTP 434
            ++ +D    +  L   P
Sbjct: 377 -VFRVDSTSGDLRLAGEP 393


>gi|189022452|ref|YP_001932193.1| G-protein beta WD-40 repeat [Brucella abortus S19]
 gi|189021026|gb|ACD73747.1| G-protein beta WD-40 repeat [Brucella abortus S19]
          Length = 272

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 43/281 (15%), Positives = 94/281 (33%), Gaps = 28/281 (9%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           + GK   +     R +    +  +   +      + + +       V      +      
Sbjct: 3   VDGKSLVTGGEDGR-VCRIDAKGVVTELANIPRKWITAVATGPNGTVGFASGKTAWSRAA 61

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG    +    +++ +    F+P  Q++A A Y+        L+ T     P  +  ++ 
Sbjct: 62  DGKVQEFT---QERSVEGIAFAPKGQRLAIARYNG-----ATLIWTGTAAKPVEL-EWKG 112

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +   FS +G+  + S+Q++ A+  +   L+ N   R+T         S+S  +  +  
Sbjct: 113 AHIGITFSPDGRFLITSMQEN-ALHGWR--LEDNKHMRMTGYPAKVKDWSWSAKAKWLA- 168

Query: 319 ESDREGKEQLYVMQSNGSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                G     V    G D         +    ++        P G+ IA   ++     
Sbjct: 169 ---TSGAPAAIVWPFAGKDGPMGKAPLELGLRGDSMVTSVACHP-GEDIAAIGYNDG--M 222

Query: 373 IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKD 411
           I +++    +E LL       + +  W   G  L+F  +  
Sbjct: 223 ILIVRFADQKEVLLRRPGKGAITSMAWDEDGYRLVFGSQAG 263



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 64/182 (35%), Gaps = 28/182 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----FINISASYSPDSSQIVFESDR 322
           +GK  +      E   +  +D +      L N        +    +       + F S  
Sbjct: 4   DGKSLV---TGGEDGRVCRIDAK-GVVTELANIPRKWITAVATGPN-----GTVGFAS-- 52

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              +  +   ++G  Q+     +E S     ++P+G  +A  +++G      +     ++
Sbjct: 53  --GKTAWSRAADGKVQE---FTQERSVEGIAFAPKGQRLAIARYNGATL---IWTGTAAK 104

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
              L         T+SP GR LI S +++   G +L     + ++  +   PA   D  W
Sbjct: 105 PVELEWKGAHIGITFSPDGRFLITSMQENALHGWRL----EDNKHMRMTGYPAKVKDWSW 160

Query: 443 VG 444
             
Sbjct: 161 SA 162


>gi|119192230|ref|XP_001246721.1| hypothetical protein CIMG_00492 [Coccidioides immitis RS]
          Length = 720

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 18/183 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++  S   + +L ++  +G + R +   ++  + +  +SPN ++             V
Sbjct: 247 VDKTGKSYYGETTLYLLSTNGFDSR-IDLDKEGPIHDVTWSPNSKEFGVVYGYMPAKTTV 305

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  LAPR    FS +G+  +++   + A  +   DL+ N T+
Sbjct: 306 FN---------SRGAATHSFPLAPRNTIVFSPHGRFVIVAGFGNLAGQMDIYDLEKNYTK 356

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             T          +SPD   I     S R   +    +   G     +  +     +D  
Sbjct: 357 VATVEASNASVCEWSPDGKHILTATTSPRLRVDNGVRIWHVGGGL--MYNEDMNELYDVH 414

Query: 354 WSP 356
           W P
Sbjct: 415 WRP 417



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 69/222 (31%), Gaps = 24/222 (10%)

Query: 218 RFSPNQQK--VAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALI 274
             SP Q      +          V + +      P  +   F+   +  +++ +G   ++
Sbjct: 182 AISPGQNHTVAVFIPERKGQPASVKVFNVPQFNLPLSQKNFFKGDKVQMKWNKSGTTLIV 241

Query: 275 SVQKD---------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--VFESDRE 323
             Q +             +Y +      +    +        ++SP+S +   V+     
Sbjct: 242 LAQTEVDKTGKSYYGETTLYLLSTNGFDSRIDLDKEGPIHDVTWSPNSKEFGVVY----- 296

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G         N       S    A     V+SP G  +    F      + +   + +  
Sbjct: 297 GYMPAKTTVFNSRGAATHSF-PLAPRNTIVFSPHGRFVIVAGFGNLAGQMDIYDLEKNYT 355

Query: 384 RLLV-EDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
           ++   E SN     WSP G+ ++ +        D G +++ +
Sbjct: 356 KVATVEASNASVCEWSPDGKHILTATTSPRLRVDNGVRIWHV 397


>gi|47200006|emb|CAF87417.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 239

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 58/172 (33%), Gaps = 21/172 (12%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +     ++    F  NG   L+S  +D+ + I+ +  +    + L+         S SPD
Sbjct: 6   LHGHEGVVRDLVFPQNGTLTLVSSSRDKTLRIWDLAHKGRRAQVLSGHKDWISCCSVSPD 65

Query: 313 SSQIVFESDREGKEQLY-------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S I      +    L+       +    G      ++          +SP G L+A   
Sbjct: 66  CSMIASVGRFDRMVCLWSLRSYTLIRNLTGG-----TRKTLYLLSSCDFSPDGALLATAA 120

Query: 366 FSGEKFAIGVMKKDGSQERLLV--------EDSNLQAPTWSPSGRSLIFSRK 409
           FSG  + I +     + E+L            + + +  +SP G  L     
Sbjct: 121 FSGSSWWIDLWDP-YTAEKLATLVDYFDDYGQNQISSVQFSPDGLYLAIVTD 171


>gi|67478341|ref|XP_654575.1| WD domain containing protein [Entamoeba histolytica HM-1:IMSS]
 gi|56471633|gb|EAL49187.1| WD domain containing protein [Entamoeba histolytica HM-1:IMSS]
          Length = 463

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/263 (16%), Positives = 77/263 (29%), Gaps = 36/263 (13%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           Q +T  +   N  IL+ S           + V D   AN  ++       +       N 
Sbjct: 232 QGVTSVRWSGNENILYTSSR------DRMINVYDMRQANPIHVLKGHSHWI-------NG 278

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
              +      +        D  ID A KR+               G   L+S   D  + 
Sbjct: 279 ISTSTEYVLRQGGYDPLEKDKGIDGAKKRLDKIMGC--------GGGERLVSASDDGTLY 330

Query: 284 IYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++ V LQS     RL       +S  +SPDS  I         + + +            
Sbjct: 331 MW-VPLQSQKPVHRLVGHSSQVMSCKFSPDSRIIASTGC---DKNMRIWDGFTGSCLHTY 386

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPT--WS 398
           +    + +   WSP   ++             V+       +L+        +  +  WS
Sbjct: 387 RGHVQTIYGCAWSPDSRMLVSASKDSTVKLWNVVP---GCRKLMTNLPGHLDEVFSIDWS 443

Query: 399 PSGRSLIFSRKKDGDTGSKLYSI 421
             G S+  +     D   K++  
Sbjct: 444 LDGSSVATASY---DHTIKIWRY 463


>gi|152964417|ref|YP_001360201.1| peptidase S9 prolyl oligopeptidase [Kineococcus radiotolerans
           SRS30216]
 gi|151358934|gb|ABS01937.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kineococcus radiotolerans SRS30216]
          Length = 599

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 68/210 (32%), Gaps = 18/210 (8%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA---MDIYSVDL-QSNATERL 297
           +D   D A +R+   R    A   S + +   I+  +       D+  +DL   +    L
Sbjct: 141 IDVVADGATRRVYEHREDAWAGDLSPDERFLAIAHSEHGDSRHPDLRVLDLTDGSVVAEL 200

Query: 298 TNTLFINISAS-YSP---DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           ++     +S   +SP   D+  +V E +R G+ +L V+      +  I+           
Sbjct: 201 SDGPGKGVSPLGFSPVRGDARLLV-EHERAGRPELLVLDLLTGREVPIALGVPGEVAGAE 259

Query: 354 WSPQGD-LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-SLIFSRKKD 411
           W      L+          A  V    G  +R+      +   T  P G   L +S    
Sbjct: 260 WLRDATGLVVLVDHEARTLAHRVDFATGGVQRIGPATGTVGGATTRPDGDVWLSWSSSAR 319

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                 L         E L+  P   + P 
Sbjct: 320 PWVVGNL-------AGEVLLRAPGEPAPPS 342



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 62/181 (34%), Gaps = 13/181 (7%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +R ++       ++++S D  + A  RLT+      SA+  P    + +  D  G E   
Sbjct: 33  QRCVVEATVGGVLEVHSFDAATGALHRLTDRPEGTSSATIDPAGEFVWWFDDTAGDEYGV 92

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQG------DLIAFTKFSGE-KFAIGVMKKDGSQ 382
             +          +  E     P   P G       L+       E    I V+  DG+ 
Sbjct: 93  WRRQPFGSAPG--EGVEDPLGLPPAYPAGLALGRSGLVVVGSQDDEYGTRIDVV-ADGAT 149

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRN--ETLINTPAYASD 439
            R+     +  A   SP  R L  +  + GD+    L  +DL   +    L + P     
Sbjct: 150 RRVYEHREDAWAGDLSPDERFLAIAHSEHGDSRHPDLRVLDLTDGSVVAELSDGPGKGVS 209

Query: 440 P 440
           P
Sbjct: 210 P 210



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 52/169 (30%), Gaps = 4/169 (2%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSP-NQQKVAYATY 231
           + R L ++ S         L V+D  DG+ +  L+    + +    FSP          +
Sbjct: 167 DERFLAIAHSEHGDSRHPDLRVLDLTDGSVVAELSDGPGKGVSPLGFSPVRGDARLLVEH 226

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           +      + ++D    R           +    +  +    ++ V  +     + VD  +
Sbjct: 227 ERAGRPELLVLDLLTGREVPIALGVPGEVAGAEWLRDATGLVVLVDHEARTLAHRVDFAT 286

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              +R+         A+  PD    V+ S         V    G    R
Sbjct: 287 GGVQRIGPATGTVGGATTRPDGD--VWLSWSSSARPWVVGNLAGEVLLR 333


>gi|332218708|ref|XP_003258496.1| PREDICTED: hypothetical protein LOC100606516 [Nomascus leucogenys]
          Length = 1288

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 72/244 (29%), Gaps = 55/244 (22%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   +++P+   +A  + D    LR++    +          F   I    +
Sbjct: 735 IYTEHAHQVVVAKYAPSGFYIA--SGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAW 792

Query: 266 SSNGKRALISVQK--------------------DEAMDIYSVDLQSNATERLTNTLFINI 305
           + + KR  +  +                          I SVD++ +   RL      N 
Sbjct: 793 TEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNC 852

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A +             EG    +              D         +SP G+  A   
Sbjct: 853 AAFF-------------EGPPFKFKFTIG---------DHSRFVNCVRFSPDGNRFATAS 890

Query: 366 FSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G    I +      ++          D  + A +WSP    L+      GD  SK++ 
Sbjct: 891 ADG---QIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLL---SASGDKTSKIWD 944

Query: 421 IDLN 424
           +++N
Sbjct: 945 VNVN 948



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 66/215 (30%), Gaps = 36/215 (16%)

Query: 108 AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA-------- 155
           A  +V  +    G       +  + R+WD   ++ ++  ++       + IA        
Sbjct: 740 AHQVVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRI 799

Query: 156 -------HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-------GA 201
                                 G+       ++   +       L     D       G 
Sbjct: 800 AVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGP 859

Query: 202 NIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-- 257
             ++     D   F    RFSP+  + A A+ D     ++Y+ D +       +G  +  
Sbjct: 860 PFKFKFTIGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAH 915

Query: 258 -SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              I A  +S +    L S   D+   I+ V++ S
Sbjct: 916 DGGIYAISWSPDSTHLL-SASGDKTSKIWDVNVNS 949


>gi|322433938|ref|YP_004216150.1| peptidase S9B dipeptidylpeptidase IV domain protein [Acidobacterium
           sp. MP5ACTX9]
 gi|321161665|gb|ADW67370.1| peptidase S9B dipeptidylpeptidase IV domain protein [Acidobacterium
           sp. MP5ACTX9]
          Length = 810

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 35/107 (32%), Gaps = 21/107 (19%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS----------- 390
           +  +  +      SP G   AF +     + + +      +E  L  D            
Sbjct: 159 TGRRGKAMGGVDVSPDGKKAAFIR----DWNLWLRDLPTGKETQLTTDGIPNYGYATDNA 214

Query: 391 ---NLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              +   P   WSP  + +  + ++D     +LY  ++   + TL  
Sbjct: 215 GWSHSDNPILVWSPDSKHIA-TFQQDQRKTGELYLTNVTNGHPTLTT 260



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 53/170 (31%), Gaps = 29/170 (17%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-------------TLFINISA--SY 309
            S +GK+A          +++  DL +    +LT                  + +    +
Sbjct: 171 VSPDGKKAAFIRD----WNLWLRDLPTGKETQLTTDGIPNYGYATDNAGWSHSDNPILVW 226

Query: 310 SPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFS 367
           SPDS  I  F+ D+    +LY+          ++  K     D   +    ++       
Sbjct: 227 SPDSKHIATFQQDQRKTGELYLTNVTNGHPT-LTTLKYPLVGDKDVTMIERVVINLEGKD 285

Query: 368 GEKFAIGVMKKDGSQERLLV-------EDSNLQAPTWSPSGRSLIFSRKK 410
            +K  +  +K    Q R  +         S      WS   ++L F    
Sbjct: 286 SDKSKLVRLKMAPDQHRSTLCDDISCRGGSGWDDVQWSSDSKNLAFVSTS 335



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 20/162 (12%), Positives = 45/162 (27%), Gaps = 25/162 (15%)

Query: 265 FSSNGKRALI-SVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----- 317
           +SS+ K     S  +D     +   +  +     +        +  +    +  V     
Sbjct: 322 WSSDSKNLAFVSTSRDHRQEWMRIANPATGEIREVMG----ETAPKFFESGNDKVNWHYL 377

Query: 318 -------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
                  + S+R+G   LY+  +N    K        +    +   +   + + +  G+ 
Sbjct: 378 AATNELLWFSERDGWGHLYLYDTNTGKLKTQITHGNWNVTQVLVVDEKARVIYFRGVGKD 437

Query: 371 FA-------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                       +   G    LL  +      T SP     +
Sbjct: 438 PNEDPYFQKYYRVDFTGDNLALLTPERGDHTVTPSPDNHYFV 479



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 90/253 (35%), Gaps = 33/253 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            + S + IL    +SP+ + +A    D      +YL +   +  P        ++     
Sbjct: 216 WSHSDNPILV---WSPDSKHIATFQQDQRKTGELYLTNV-TNGHPTLTTLKYPLVGDKDV 271

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQI 316
           +   +R +I+++  ++     V L+  A ++  +TL  +IS           +S DS  +
Sbjct: 272 TMI-ERVVINLEGKDSDKSKLVRLK-MAPDQHRSTLCDDISCRGGSGWDDVQWSSDSKNL 329

Query: 317 VFES-DREGKEQ-LYVMQSNGSDQKRISQD--------KEASYFDPVWSPQGDLIAFTKF 366
            F S  R+ +++ + +      + + +  +                  +   +L+ F++ 
Sbjct: 330 AFVSTSRDHRQEWMRIANPATGEIREVMGETAPKFFESGNDKVNWHYLAATNELLWFSER 389

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS-PSGR-SLIFSRKKDGDTG-----SKLY 419
            G    + +   +  + +  +   N           +  +I+ R    D        K Y
Sbjct: 390 DGWG-HLYLYDTNTGKLKTQITHGNWNVTQVLVVDEKARVIYFRGVGKDPNEDPYFQKYY 448

Query: 420 SIDLNGRNETLIN 432
            +D  G N  L+ 
Sbjct: 449 RVDFTGDNLALLT 461



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 18/179 (10%), Positives = 54/179 (30%), Gaps = 26/179 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG--------- 269
           +S + + +A+ +   +       +        + +        AP+F  +G         
Sbjct: 322 WSSDSKNLAFVSTSRDHRQEWMRIANPATGEIREV----MGETAPKFFESGNDKVNWHYL 377

Query: 270 ---KRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGK 325
                 L   ++D    +Y  D  +     ++T+  +         + +++++       
Sbjct: 378 AATNELLWFSERDGWGHLYLYDTNTGKLKTQITHGNWNVTQVLVVDEKARVIYFRGVGKD 437

Query: 326 EQ-------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     Y +   G +   ++ ++      P  SP       T  +     + V++
Sbjct: 438 PNEDPYFQKYYRVDFTGDNLALLTPERGDHTVTP--SPDNHYFVDTWSTPTDPQVTVVR 494


>gi|300772694|ref|ZP_07082564.1| dipeptidyl peptidase IV [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760997|gb|EFK57823.1| dipeptidyl peptidase IV [Sphingobacterium spiritivorum ATCC 33861]
          Length = 707

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/297 (13%), Positives = 88/297 (29%), Gaps = 52/297 (17%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G+  S  +         +    + +   DG  +R LT S D     P  SP+   VA+  
Sbjct: 72  GERKSYTVPTKSGTTVEVKDKDVQIRFADGT-VRKLTNSPDVEEQNPTLSPDGNYVAFTR 130

Query: 231 ----------------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
                           Y  +    +Y   +      + +G   +   A  +S + K+   
Sbjct: 131 ASNLFAVQVSSGKEIQYTTDGTDVIYNGYSSWVYYEEILGRSTNYK-AFWWSPDSKKLAF 189

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               D  + ++ + +       L  T +                  D+    ++ V+ ++
Sbjct: 190 MRFDDTEVPMFPIYVSKGQHGYLEKTRYPKAG--------------DKNPLVKVGVVNTD 235

Query: 335 GSDQKRISQD--KEASYFDPVWSPQGDLIA--FTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           G        +   +  + +P W+   + I   +            +      ++ +    
Sbjct: 236 GGAVVWADFNEQDDQYFGEPYWAFNSENIMVQWMNREQNNLKFYQVNPQTGAKKEI---Y 292

Query: 391 NLQAPTW-----------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           + + P+W               +  I    K G     LY+  L+G+    I +  +
Sbjct: 293 DEKQPSWINLDHDERITYLSDNKHYILKSDKTGWAHYYLYT--LDGKLINPITSGDW 347



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 58/407 (14%), Positives = 132/407 (32%), Gaps = 79/407 (19%)

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ----IIGKK 143
            ++ +    I  F  W   G   L       EG  R +  F++ DV   ++    +  K 
Sbjct: 33  GRQPSVTKPITSFSGWAD-GTHYL-------EGNPRDKQMFQV-DVSTGERKSYTVPTKS 83

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNS-RILFVSESVVSGIIKNSLC-VMDRDGA 201
             +     + +    +D   + +T           L    + V+    ++L  V    G 
Sbjct: 84  GTTVEVKDKDVQIRFADGTVRKLTNSPDVEEQNPTLSPDGNYVAFTRASNLFAVQVSSGK 143

Query: 202 NIRYLTPSRDQILF-------------------EPRFSPNQQKVAYATYDDE--DILRVY 240
            I+Y T   D I                        +SP+ +K+A+  +DD    +  +Y
Sbjct: 144 EIQYTTDGTDVIYNGYSSWVYYEEILGRSTNYKAFWWSPDSKKLAFMRFDDTEVPMFPIY 203

Query: 241 LMDTRIDRAPK-----------------RIGNFRSMILA------------PRFSSNGKR 271
           +   +     K                    +  +++ A            P ++ N + 
Sbjct: 204 VSKGQHGYLEKTRYPKAGDKNPLVKVGVVNTDGGAVVWADFNEQDDQYFGEPYWAFNSEN 263

Query: 272 ALISV--QKDEAMDIYSVDLQSNATERLTNT---LFINISA----SYSPDSSQIVFESDR 322
            ++    ++   +  Y V+ Q+ A + + +     +IN+      +Y  D+   + +SD+
Sbjct: 264 IMVQWMNREQNNLKFYQVNPQTGAKKEIYDEKQPSWINLDHDERITYLSDNKHYILKSDK 323

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGVMKKD 379
            G    Y+   +G     I+   +          +   + +     E      +  +   
Sbjct: 324 TGWAHYYLYTLDGKLINPITS-GDWQVTSIAHIDEKAKVLYVNARKENSATVDLYRVDFS 382

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           G   + L         + SP  +  I +   + +T +K+  +  +G+
Sbjct: 383 GKNFKRLTFGDYTHNVSVSPDAKYFI-TNYSNINTPNKVALLRTDGK 428


>gi|229071862|ref|ZP_04205074.1| TolB domain protein [Bacillus cereus F65185]
 gi|228711234|gb|EEL63197.1| TolB domain protein [Bacillus cereus F65185]
          Length = 382

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 74/223 (33%), Gaps = 55/223 (24%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           + + +  P++S + + +AY     ++IL +Y +     +  K++  F S     ++S   
Sbjct: 24  KGENITGPKWSHDGEWLAYVKGKKQNILELYRL-----KDGKKVTPFHSEASNYQWSPTE 78

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----SYSPDSSQIVFESDREG 324
                         + + D++        N  F N+SA     ++ PD    +  S+   
Sbjct: 79  NIIAFIFTG----TLNTFDVEKK------NADFENVSAGVGDYAWYPDGKNFLVSSEAHL 128

Query: 325 KEQLYVMQSNGSDQKRISQDKEAS---------------------YFDPVWSPQGDLIAF 363
               +     G+    + +D   +                          WSP    I+F
Sbjct: 129 LPTGWT----GAQLYEVQKDAHMNPHKMKHLYALPNEHDDFLALVASGFKWSPDQKWISF 184

Query: 364 -----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNLQAPT 396
                  +S +   + ++  DGS      + LL       AP+
Sbjct: 185 LAVPTASWSADSNTLCLVCADGSRFEKVDQMLLNAQWFQWAPS 227



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 35/85 (41%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       +        +E+ L +  N+  P WS  G  L + + K      +LY
Sbjct: 2   KVAFIRHHNLWIKVE------GKEKQLTKGENITGPKWSHDGEWLAYVKGKK-QNILELY 54

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+  T  ++   AS+ QW  
Sbjct: 55  RLK-DGKKVTPFHS--EASNYQWSP 76



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 80/202 (39%), Gaps = 29/202 (14%)

Query: 218 RFSPNQQKVAY-------ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           ++SP+Q+ +++        + D   +  V    +R ++  + + N +    AP      K
Sbjct: 174 KWSPDQKWISFLAVPTASWSADSNTLCLVCADGSRFEKVDQMLLNAQWFQWAPS-----K 228

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREG- 324
             L  ++    + + +  L+      L     T   +++    +  D   IV  +   G 
Sbjct: 229 NILAYIEGSGRVALENKHLKVKELPALQQNIFTPKGYVDWDFVWKNDRVIIVSRAKEAGI 288

Query: 325 --------KEQLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                      LY + S  + Q +I++ K     + P++  + + + + +   +K  + +
Sbjct: 289 ETPPEKRPLPSLYEVDSTSNAQHQITKKKNKQGDYHPIFMKKSNQLIWIRSDRKKADVWL 348

Query: 376 MKKDGSQERLLVEDSNLQAPTW 397
             KDG QE+  +E  N+  P W
Sbjct: 349 AHKDGKQEKKWIE--NIDVPAW 368


>gi|196010591|ref|XP_002115160.1| hypothetical protein TRIADDRAFT_28728 [Trichoplax adhaerens]
 gi|190582543|gb|EDV22616.1| hypothetical protein TRIADDRAFT_28728 [Trichoplax adhaerens]
          Length = 484

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 55/149 (36%), Gaps = 13/149 (8%)

Query: 185 VSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VSG    +L +                 Q++    FSP+ + +A A++D      V L D
Sbjct: 341 VSGSDDYTLFLWHPAKEKTPIARMTGHQQLVNMVCFSPDTRLIASASFDK----SVKLWD 396

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
               R    +      +    +S++  R  +S   D  + ++  D++S      L     
Sbjct: 397 GITGRFITSLRGHVKSVYQVSWSAD-SRLFLSSSADSTLKVW--DVKSKKLHMDLPGHAD 453

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVM 331
              +  +SPD  ++       GK+++  +
Sbjct: 454 EVYAIDWSPDGEKVA----SGGKDRVLKL 478



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 6/134 (4%)

Query: 230 TYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                D   ++L     ++ P  R+   + ++    FS +  R + S   D+++ ++   
Sbjct: 340 MVSGSDDYTLFLWHPAKEKTPIARMTGHQQLVNMVCFSPD-TRLIASASFDKSVKLWD-G 397

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +       L   +      S+S DS   +F S       L V                  
Sbjct: 398 ITGRFITSLRGHVKSVYQVSWSADSR--LFLSS-SADSTLKVWDVKSKKLHMDLPGHADE 454

Query: 349 YFDPVWSPQGDLIA 362
            +   WSP G+ +A
Sbjct: 455 VYAIDWSPDGEKVA 468



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 53/157 (33%), Gaps = 15/157 (9%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           GK  ++S   D  + ++    +     R+T    +     +SPD+  I   S  +   +L
Sbjct: 336 GKELMVSGSDDYTLFLWHPAKEKTPIARMTGHQQLVNMVCFSPDTRLIASASF-DKSVKL 394

Query: 329 YVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +    +G   + I+  +    S +   WS    L   +        + V      +  + 
Sbjct: 395 W----DGITGRFITSLRGHVKSVYQVSWSADSRLFLSSSADST---LKVWDVKSKKLHMD 447

Query: 387 VEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
           +     +     WSP G  +        D   KLY+ 
Sbjct: 448 LPGHADEVYAIDWSPDGEKVA---SGGKDRVLKLYAY 481



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 32/95 (33%), Gaps = 10/95 (10%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +  R ++TL  +  A    +YSPD S +   S   G   +     N        +  + 
Sbjct: 87  KSVTRCSSTLPGHTEAVISVAYSPDGSYLASGS---GDTTVRFWDINTETPDYTCKGHKH 143

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                 WSP G+ +A     G    I +      +
Sbjct: 144 WILSIAWSPDGEKLASGCKKG---EICLWDPKTGK 175


>gi|47224981|emb|CAF97396.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 268

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 68/174 (39%), Gaps = 25/174 (14%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           + + ++  R  K +   +  +LA R++ +G  AL++  +D  + I+S   +S       +
Sbjct: 85  FHLASKAGRIEKSVEAHKGAVLAGRWNLDGT-ALVTAGEDGQIKIWS---KSGMLR---S 137

Query: 300 TLFINISASYS----PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           TL    S  +S    P+S +I++ S R    QL +     S +    +  +       W+
Sbjct: 138 TLASQGSPVFSVAWGPNSDRIIYTSGR----QLVIKPLQPSAKVTQWKAHDGFVMKIDWN 193

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI 405
              DLI      GE     V    G   RLL   S    P     W+P G    
Sbjct: 194 SVNDLIL---SGGEDCKYKVWDSFG---RLLFSSSAHDYPVTSLAWAPDGEVFA 241


>gi|329930217|ref|ZP_08283830.1| hypothetical protein HMPREF9412_6307 [Paenibacillus sp. HGF5]
 gi|328935239|gb|EGG31720.1| hypothetical protein HMPREF9412_6307 [Paenibacillus sp. HGF5]
          Length = 381

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 44/128 (34%), Gaps = 18/128 (14%)

Query: 289 LQSNATERLTNTLF-----INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           L      +LT+              +     +++F SDRE    LY M     +  +++ 
Sbjct: 18  LTGVEVVQLTDYKAHSHHLYFTENGWYDGGKRLLFVSDRENSSNLYSMDVISGEMLQLTD 77

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED------SNLQAPTW 397
             +    D    P G   AF K      ++  +     +E L+ E        NL  P  
Sbjct: 78  YPDNDDVDACLLPDGRA-AFVK---TGRSVRRLDLTTLEEELVYEAPEGYNIGNLSCPA- 132

Query: 398 SPSGRSLI 405
              GRS++
Sbjct: 133 --DGRSVV 138



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 41/96 (42%), Gaps = 6/96 (6%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQ 327
           GKR L    ++ + ++YS+D+ S    +LT+     ++ A   PD  +  F   + G+  
Sbjct: 47  GKRLLFVSDRENSSNLYSMDVISGEMLQLTDYPDNDDVDACLLPDG-RAAFV--KTGRS- 102

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIA 362
           +  +     +++ + +  E      +  P  G  + 
Sbjct: 103 VRRLDLTTLEEELVYEAPEGYNIGNLSCPADGRSVV 138



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 52/155 (33%), Gaps = 17/155 (10%)

Query: 284 IYSVDLQSNATERLTN--TLFINISASYS-PDSSQIVFESDR-EGKEQLYVMQSNGSDQK 339
           I+ +DL++    R+         +   +  PD   I +   R +G      ++ + +  +
Sbjct: 221 IWGLDLRNGEAWRIRQRLEPGEKVGHEFFYPDGVTIGYHGFRMDGTNFFGNIRYDNTAME 280

Query: 340 RISQDKEASYFDPVWSPQ-GDLIAFTKFSGEKFAIGVMKKDG--SQERLLVE-------D 389
                         ++   G  +   K S +  ++      G     R+L E        
Sbjct: 281 ETDF---GFDTWHAYADGLGQAVVDGKGSVKTLSVWRKDAKGVYQGPRMLCELRCSFHSQ 337

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                P + P G+ L+F+  K+G     L  +  +
Sbjct: 338 KVHAHPRFDPDGKRLLFTSDKNGYGNLYLVDMPED 372



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 35/249 (14%), Positives = 75/249 (30%), Gaps = 32/249 (12%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQI-IGKKFFSSPASWRKIAHTISDDIYQSITGEKG 171
            G +      R  V     D+  R Q+ +G  +           H+    I      +  
Sbjct: 125 IGNLSCPADGRSVVTCIQEDLSHRMQLDLGNGYVGHRELMEAAPHSRIVRIDSEGQTQPE 184

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMD------RD----GANIRYLTPSRDQILFEPR--- 218
                  F++    S +    +           D    G ++R     R +   EP    
Sbjct: 185 TLYEAHRFITHINASPVEPWLITFCHEGPWHLVDHRIWGLDLRNGEAWRIRQRLEPGEKV 244

Query: 219 ----FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               F P+   + Y  +  +     +  + R D       +F        ++ +G    +
Sbjct: 245 GHEFFYPDGVTIGYHGFRMDGTN--FFGNIRYDNTAMEETDF-GFDTWHAYA-DGLGQAV 300

Query: 275 SVQKDE--AMDIYSVDLQS--NATERL------TNTLFINISASYSPDSSQIVFESDREG 324
              K     + ++  D +        L       ++  ++    + PD  +++F SD+ G
Sbjct: 301 VDGKGSVKTLSVWRKDAKGVYQGPRMLCELRCSFHSQKVHAHPRFDPDGKRLLFTSDKNG 360

Query: 325 KEQLYVMQS 333
              LY++  
Sbjct: 361 YGNLYLVDM 369


>gi|330842138|ref|XP_003293041.1| hypothetical protein DICPUDRAFT_83630 [Dictyostelium purpureum]
 gi|325076673|gb|EGC30441.1| hypothetical protein DICPUDRAFT_83630 [Dictyostelium purpureum]
          Length = 300

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 74/234 (31%), Gaps = 10/234 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G +  ++ + D +   +     S      +  F  N  ++   +        + +  T 
Sbjct: 74  TGGLDGTIRIFDLNTNTLYKSLDSGPLGCLKIGFLNNADRLVSVSESG----NITIYSTE 129

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                K I N    IL    S N ++ ++    D  +  Y V+        +        
Sbjct: 130 SGEKLKTISNQNKQILTMAISPNNEQIIVGG-LDGVVSCYEVE-SGRRITEIKAHGVPVR 187

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFT 364
           S S+S DS  I F    +   Q+ +   N S     S    +S+      S  G+L+A +
Sbjct: 188 SLSFSSDSKTI-FTGGED--SQIRLHDPNSSTPYIASLMGHSSFILSLAASRDGNLLASS 244

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
               +K  I  +K             ++    WSP    L+            L
Sbjct: 245 GSIDKKVCIWDIKTRKLDSTFTAHADHVWDLAWSPDSTKLVSVSDDGSLHSYAL 298


>gi|303312995|ref|XP_003066509.1| hypothetical protein CPC735_057340 [Coccidioides posadasii C735
           delta SOWgp]
 gi|240106171|gb|EER24364.1| hypothetical protein CPC735_057340 [Coccidioides posadasii C735
           delta SOWgp]
          Length = 720

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 18/183 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++  S   + +L ++  +G + R +   ++  + +  +SPN ++             V
Sbjct: 247 VDKTGKSYYGETTLYLLSTNGFDSR-IDLDKEGPIHDVTWSPNSKEFGVVYGYMPAKTTV 305

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  LAPR    FS +G+  +++   + A  +   DL+ N T+
Sbjct: 306 FN---------SRGAATHSFPLAPRNTIVFSPHGRFVIVAGFGNLAGQMDIYDLEKNYTK 356

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             T          +SPD   I     S R   +    +   G     +  +     +D  
Sbjct: 357 VATVEASNASVCEWSPDGKHILTATTSPRLRVDNGVRIWHVGGGL--MYNEDMNELYDVH 414

Query: 354 WSP 356
           W P
Sbjct: 415 WRP 417



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/222 (13%), Positives = 69/222 (31%), Gaps = 24/222 (10%)

Query: 218 RFSPNQQK--VAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALI 274
             SP Q      +          V + +      P  +   F+   +  +++ +G   ++
Sbjct: 182 AISPGQNHTVAVFIPERKGQPASVKVFNVPQFNLPLSQKNFFKGDKVQMKWNKSGTTLIV 241

Query: 275 SVQKD---------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--VFESDRE 323
             Q +             +Y +      +    +        ++SP+S +   V+     
Sbjct: 242 LAQTEVDKTGKSYYGETTLYLLSTNGFDSRIDLDKEGPIHDVTWSPNSKEFGVVY----- 296

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G         N       S    A     V+SP G  +    F      + +   + +  
Sbjct: 297 GYMPAKTTVFNSRGAATHSF-PLAPRNTIVFSPHGRFVIVAGFGNLAGQMDIYDLEKNYT 355

Query: 384 RLLV-EDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
           ++   E SN     WSP G+ ++ +        D G +++ +
Sbjct: 356 KVATVEASNASVCEWSPDGKHILTATTSPRLRVDNGVRIWHV 397


>gi|166365791|ref|YP_001658064.1| hypothetical protein MAE_30500 [Microcystis aeruginosa NIES-843]
 gi|166088164|dbj|BAG02872.1| hypothetical protein MAE_30500 [Microcystis aeruginosa NIES-843]
          Length = 438

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 78/204 (38%), Gaps = 15/204 (7%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            S D ++ +  F+ N++ +  A+ D    LR++   T  +     IG+  ++      S 
Sbjct: 171 HSHDGVILQLAFAANERFIVSASND--KTLRIWGYHTG-ELKRTLIGHEEAVNTC-AISP 226

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +  + + S   D+ + ++  D        + +   +N S ++S D   ++        + 
Sbjct: 227 D-SQIIASGSDDKTIKLWRFDNSYAYQTFIGDRAAVN-SLAFSNDGQYLI---SGGSDKT 281

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +      +  +  Q  E +      +P   LIA    +  +  I    + G   ++L 
Sbjct: 282 IKIWDIKTGEIIKSWQAHEQAIISIAINPHRHLIASASRT--EIKIW-QGQTGELIKILR 338

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKD 411
             + L+   +SP G  LI     D
Sbjct: 339 GTAPLK---FSPDGHFLITGSYGD 359


>gi|70992965|ref|XP_751331.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
 gi|66848964|gb|EAL89293.1| conserved hypothetical protein [Aspergillus fumigatus Af293]
          Length = 621

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 53/151 (35%), Gaps = 10/151 (6%)

Query: 265 FSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           FS +G   L      E   +D+++V L + A  RLT+        ++S D    V    R
Sbjct: 278 FSGSGDEILYIGSPREANNIDVFAVHLVTGAVRRLTSHPEYTDPVAFSRDDKWFVAMDTR 337

Query: 323 EGKEQLY----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
               Q++     M     D   ++         P    Q  LI      G+ F   V   
Sbjct: 338 GSDRQMWMSGMRMVPPLIDLVTVTAASSTRNNGPRRFFQPILIDRHGDRGDYFGQQV-NA 396

Query: 379 DGSQERLLVEDSNLQA---PTWSPSGRSLIF 406
           +G      V D N      P++SP    ++F
Sbjct: 397 EGDGSNGSVNDPNWNGRADPSFSPDSTRIVF 427


>gi|302780385|ref|XP_002971967.1| hypothetical protein SELMODRAFT_412737 [Selaginella moellendorffii]
 gi|300160266|gb|EFJ26884.1| hypothetical protein SELMODRAFT_412737 [Selaginella moellendorffii]
          Length = 715

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 46/286 (16%), Positives = 86/286 (30%), Gaps = 59/286 (20%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG------ANIRYLTPSRDQILFEPRFS 220
           T  KG   +    V+  + S     ++   +RDG       NI  ++           ++
Sbjct: 11  TTHKGLVAAVGWNVTNDLYSCGDDYAIWCWNRDGKPILKLENIDSISTDLQCYPLTSHWN 70

Query: 221 --PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
              +   +   +  D        +  R  +  KR+      IL  R+S++G     +  +
Sbjct: 71  RTGSGSDIFVVSCIDGS----LHISNRTGKEEKRVQAHAGSILCVRWSTDGSALA-TGGE 125

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE----------------SDR 322
           D  + I+S          L  +     + ++SP S Q++F                 S  
Sbjct: 126 DGIVKIWSC--SGMLRSTLAQSPCPIYALAWSPSSDQVLFACQGRLIIKSLQSSIKESHW 183

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYF---------------------DPVWSPQGDLI 361
           +G   L +          ++   E   +                        W P G+  
Sbjct: 184 DGHNGLILAVDWNYASNLLTSGGEDGVYKVWDYHGRMIYQSSKIDDSITSVAWCPSGEFF 243

Query: 362 AFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLI 405
           A   F+     + +  K G       L   S L+  +WS  G  L 
Sbjct: 244 AVGSFN----TLWLCDKTGWVLWKEKLSAGSFLRI-SWSNDGAQLA 284


>gi|260830403|ref|XP_002610150.1| hypothetical protein BRAFLDRAFT_121562 [Branchiostoma floridae]
 gi|229295514|gb|EEN66160.1| hypothetical protein BRAFLDRAFT_121562 [Branchiostoma floridae]
          Length = 653

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 72/234 (30%), Gaps = 32/234 (13%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           + + WR       + +   IT  + D +     V     +    N++  +  D    +++
Sbjct: 120 ADSGWRFADGHFCEKLNI-ITAVREDHS-----VVNRGEAKEAANTVVAIHPDTQ-EQFV 172

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP---------KRIGNFR 257
             S       PR SP+ +K+ +  ++  ++        + D  P         K  G   
Sbjct: 173 LASGSDFYASPRVSPDGKKICWTQWNHPNMPWDSTEIWQADMQPDGKGVREAHKVCGGDD 232

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-----NATERLTNTLFINISAS---Y 309
             ++ PR+S +G          +  ++Y V            +R           +   +
Sbjct: 233 ISVMYPRWSPSG-ELYYISDVSDWWNLYHVTSSGDHVAIGPQQREIGGPHWQFGNAPYDF 291

Query: 310 SPDSSQIVFE-------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            PD+  IV          +    + L  + +       +    +   +    SP
Sbjct: 292 DPDNGVIVTAYGMELGFYEMGSGKHLKNVDTGFKTHSYLVMGGKGCAYCIASSP 345



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 15/119 (12%)

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGV--MKKDGSQERLLV- 387
           + ++ +       Y  P  SP G  I +T+++          I    M+ DG   R    
Sbjct: 167 TQEQFVLASGSDFYASPRVSPDGKKICWTQWNHPNMPWDSTEIWQADMQPDGKGVREAHK 226

Query: 388 ----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
               +D ++  P WSPSG  L +           LY +  +G +  +         P W
Sbjct: 227 VCGGDDISVMYPRWSPSGE-LYYISDVSD--WWNLYHVTSSGDHVAIGPQQREIGGPHW 282


>gi|187777850|ref|ZP_02994323.1| hypothetical protein CLOSPO_01442 [Clostridium sporogenes ATCC
           15579]
 gi|187774778|gb|EDU38580.1| hypothetical protein CLOSPO_01442 [Clostridium sporogenes ATCC
           15579]
          Length = 636

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 49/324 (15%), Positives = 111/324 (34%), Gaps = 38/324 (11%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++G        S +K+     D     I G    ++   ++  ++      K+SL  +  
Sbjct: 314 VLGGTGVIPNKSIKKLTTKEEDYFGNKINGSSIIYDRGYIYYKKT----SDKDSLHRIKE 369

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG+N   +               ++  + Y  +   +   +Y          K   +   
Sbjct: 370 DGSNDTKIINDPVCNTII-----DKNYIYYNFFSFNNSNGLYRTTLDGKNKIKLSDD--- 421

Query: 259 MILAPRF-SSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINIS-----ASYSP 311
               P F +  G         +D   +++ +    ++  +++  +    S          
Sbjct: 422 -NFFPFFIALEGNYIYYIKNLEDGEAELWKMKTDGSSKSKISFNIKEEHSIDKGYGFCIK 480

Query: 312 DSSQIV--FES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +       + S + +  E  ++M      + R+  D+    F PV     D I ++  +G
Sbjct: 481 NGWIYANIYISKNADEVESKFIMAKTDGSEVRVIADEPFIRFQPV----DDYIYYSTSNG 536

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--GRSLIFS--RKKDGDTGSKLYSIDLN 424
               I  +K DG+   LL  +       ++ +     + +S    +     + +Y ++L+
Sbjct: 537 ----IYKIKNDGTNNTLLTSNKYKNNNIFNLNVCNDYIYYSVIADEHDAYLNGIYKMNLD 592

Query: 425 GRNE-TLINTPAYA--SDPQWVGF 445
           G  E  LI T A    + P+W+ F
Sbjct: 593 GTGETRLIQTQALYLWTTPKWIYF 616


>gi|325954418|ref|YP_004238078.1| dipeptidyl-peptidase IV [Weeksella virosa DSM 16922]
 gi|323437036|gb|ADX67500.1| Dipeptidyl-peptidase IV [Weeksella virosa DSM 16922]
          Length = 719

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 72/202 (35%), Gaps = 36/202 (17%)

Query: 273 LISVQKDEA-MDIYSVDLQSNATERL---TNTLFINIS---ASYSPDSSQIVFESDREGK 325
           ++S  + +  +DI    L+ N  ++L   T+  +I        + PD+S  ++ S+R+G 
Sbjct: 279 VVSSNRHQNKVDISLYSLKDNKIQKLFTETDNAWIETDQLDLEFLPDNS-FIWASERDGN 337

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------TKFSGEKFAIGVMKKD 379
              Y   + G    +I++          +  +   + F       K +  +  I  ++ +
Sbjct: 338 RHYYWYNAKGKLINQITKGDWEVTDFYGFDEKSKTLYFQANAFNGKRTSTERQIYSIEMN 397

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI--FSRKK--------------------DGDTGSK 417
           G   ++L ++    +  +S   R  I  FS                       D  +   
Sbjct: 398 GKNLKMLSKEVGTNSARFSADYRYFIQTFSSVNQPKIISLIETKSGKNLGTIIDNSSIKN 457

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           +Y+ D  G  E    T A   D
Sbjct: 458 VYATDNAGSKELFTLTAANGQD 479


>gi|320451194|ref|YP_004203290.1| acylamino-acid-releasing enzyme [Thermus scotoductus SA-01]
 gi|320151363|gb|ADW22741.1| acylamino-acid-releasing enzyme [Thermus scotoductus SA-01]
          Length = 602

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 65/184 (35%), Gaps = 31/184 (16%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE- 323
           F  +G+  L     +  + +Y+  L+    + L +          SP+   +V   D+  
Sbjct: 131 FKFDGRGLL----PEGNVALYA--LEGGQKKLLLDRYPAPRDMVPSPEGLYLVMAEDKGA 184

Query: 324 ---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKD 379
               ++ LY+++     + +         F   WSP+G       F  G      +    
Sbjct: 185 QAEWRDTLYLLK---EGRLQKVYGGFGPIFALEWSPEGLFFLGHAFERGGGTEARLYHLH 241

Query: 380 GSQERLLVEDSNLQA-------------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           G + R+L E S   +             P W+ +G  ++    +  +   +LY + L G 
Sbjct: 242 GGEVRVLFEGSLQNSINSDLRHGAHTQGPRWAGNGVYIV----RTEEGTGRLYRVGLEGE 297

Query: 427 NETL 430
            E L
Sbjct: 298 AEAL 301



 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 56/203 (27%), Gaps = 27/203 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---SV 276
           SP    +  A            +    +   +++      I A  +S  G        + 
Sbjct: 170 SPEGLYLVMAEDKGAQAEWRDTLYLLKEGRLQKVYGGFGPIFALEWSPEG--LFFLGHAF 227

Query: 277 QKDEAMDIYSVDLQSNATERLTNTL---FINI---------SASYSPDSSQIVFESDREG 324
           ++    +     L       L        IN             ++ +   IV     EG
Sbjct: 228 ERGGGTEARLYHLHGGEVRVLFEGSLQNSINSDLRHGAHTQGPRWAGNGVYIV--RTEEG 285

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA---FTKFSGEKFAIGVMKKDGS 381
             +LY +   G  +       E S      + +G  +    FT  +     +GV   +  
Sbjct: 286 TGRLYRVGLEGEAEAL---GVEGSVLSFTHTERGLFLLTEDFTHPARLWGPLGVYDPNEG 342

Query: 382 QERLLVEDSNLQAPTWSPSGRSL 404
               L E    + P  SP G  +
Sbjct: 343 VSLPLAEPIYTEWP--SPEGHRV 363


>gi|302539021|ref|ZP_07291363.1| predicted protein [Streptomyces sp. C]
 gi|302447916|gb|EFL19732.1| predicted protein [Streptomyces sp. C]
          Length = 78

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            S  P    + F  DR G  QL+   + GS    +  D E    +  WSP G  IA+T 
Sbjct: 21  PSADPTGEHVAFICDRAGVPQLWSGPARGSGAHVLDGDPE-PVTEVSWSPDGRWIAYTS 78



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 18/58 (31%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           P     G+       +     ++S   + +    L          S+SPD   I + S
Sbjct: 21  PSADPTGEHVAFICDRAGVPQLWSGPARGSGAHVLDGDPEPVTEVSWSPDGRWIAYTS 78



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 1/68 (1%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPS 400
           +       + P   P G+ +AF         +      GS   +L  D   +   +WSP 
Sbjct: 11  TLLAAHGCWYPSADPTGEHVAFICDRAGVPQLWSGPARGSGAHVLDGDPEPVTEVSWSPD 70

Query: 401 GRSLIFSR 408
           GR + ++ 
Sbjct: 71  GRWIAYTS 78


>gi|300783320|ref|YP_003763611.1| YVTN beta-propeller repeat-containing protein [Amycolatopsis
           mediterranei U32]
 gi|299792834|gb|ADJ43209.1| YVTN beta-propeller repeat-containing protein [Amycolatopsis
           mediterranei U32]
          Length = 914

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 63/164 (38%), Gaps = 21/164 (12%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +V   D  +     R+      I+A   S +G     ++  D  + +  VDL+S   ++L
Sbjct: 60  QVVSADQYLKPIGDRLVVNNGKIMASAVSPDGAHLA-ALTADGGIALTIVDLKSWKVQQL 118

Query: 298 TNTL--------FINI---SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---- 342
                         ++     SYSPD   + + +  +G  + + +  +G+     S    
Sbjct: 119 VGNSATANLRIAGNDVGQEGPSYSPDGKSL-WLAQTDGYTK-FTVNPDGTVAAPASVKIP 176

Query: 343 --QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
               K A     V+SP G  + ++  +G+   + +    G+ ++
Sbjct: 177 ADGTKHALVAQAVFSPDGATV-YSAVNGQNRVVALDAATGAIKQ 219



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 54/155 (34%), Gaps = 23/155 (14%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-------- 261
            +  +     SP+   +A  T D    L +  +D +  +  + +GN  +  L        
Sbjct: 78  NNGKIMASAVSPDGAHLAALTADGGIALTI--VDLKSWKVQQLVGNSATANLRIAGNDVG 135

Query: 262 --APRFSSNGKRALISVQKDEAMDIYSVDLQSNAT----ERLTNTL---FINISASYSPD 312
              P +S +GK     + + +    ++V+           ++        +   A +SPD
Sbjct: 136 QEGPSYSPDGKSL--WLAQTDGYTKFTVNPDGTVAAPASVKIPADGTKHALVAQAVFSPD 193

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            + +   S   G+ ++  + +     K+      A
Sbjct: 194 GATVY--SAVNGQNRVVALDAATGAIKQSWATGNA 226



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 37/119 (31%), Gaps = 23/119 (19%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV------------EDSNL 392
                     SP G  +A     G   A+ ++     + + LV             D   
Sbjct: 78  NNGKIMASAVSPDGAHLAALTADGG-IALTIVDLKSWKVQQLVGNSATANLRIAGNDVGQ 136

Query: 393 QAPTWSPSGRSLI---------FSRKKDGD-TGSKLYSIDLNGRNETLINTPAYASDPQ 441
           + P++SP G+SL          F+   DG         I  +G    L+    ++ D  
Sbjct: 137 EGPSYSPDGKSLWLAQTDGYTKFTVNPDGTVAAPASVKIPADGTKHALVAQAVFSPDGA 195



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 32/91 (35%), Gaps = 5/91 (5%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRF 265
             D     P +SP+ + +  A  D      V    T    A  +I   G   +++    F
Sbjct: 131 GNDVGQEGPSYSPDGKSLWLAQTDGYTKFTVNPDGTVAAPASVKIPADGTKHALVAQAVF 190

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           S +G         +    + ++D  + A ++
Sbjct: 191 SPDGATVY--SAVNGQNRVVALDAATGAIKQ 219


>gi|154431140|gb|ABS82039.1| activated C kinase protein [Leishmania chagasi]
          Length = 312

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 12/167 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + D R  +  ++       +LA  FS +  R ++S  +D  + +++V  +       
Sbjct: 88  SIRMWDLRNGQCQRKFLKHTKDVLAVAFSPD-DRLIVSAGRDNVIRVWNVAGECMHEFLR 146

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S  +SP     +  S       + V   NG   +R  +           SP 
Sbjct: 147 DGHEDWVSSICFSPSLEHPIVVSG-SWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPD 205

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPS 400
           G L A     G+  A  +      +   L +  N+++P     +SP+
Sbjct: 206 GSLCA---SGGKDGAALLWDLSTGE--QLFK-INVESPINQIAFSPN 246



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 17/163 (10%)

Query: 163 YQSITGEKGDFNSRILFV----SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           ++ +     D+ S I F        VVSG   N++ V + +G             +    
Sbjct: 142 HEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVT 201

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+    A             L D        +I N  S I    FS N     ++ ++
Sbjct: 202 VSPDGSLCA----SGGKDGAALLWDLSTGEQLFKI-NVESPINQIAFSPNRFWMCVATER 256

Query: 279 DEAMDIYSVDLQSNATE-RLTNT---LFINISASYSPDSSQIV 317
                +   DL+S A    LT         IS ++S D + + 
Sbjct: 257 S----LSVYDLESKAVIAELTPDGAKPSECISIAWSADGNTLY 295


>gi|125581740|gb|EAZ22671.1| hypothetical protein OsJ_06341 [Oryza sativa Japonica Group]
          Length = 554

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 78/206 (37%), Gaps = 16/206 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           ++ L   RD++ +  +FS N + +A A+ D   I+     D  +      +      ++ 
Sbjct: 223 VQVLRAHRDEV-WFLQFSNNGKYLASASNDKSAIIWKVDEDGEL-LLKHTLTGHDKPVMM 280

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESD 321
             +S +  + L     +E +  +  D++S     +     I  IS  + PD   I+    
Sbjct: 281 VAWSPDDCQLLTCG-MEEVIRCW--DVESGKCLHVYEKSGIGLISCGWFPDGKHIL---- 333

Query: 322 REG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             G       +   +G +       + +   D   S  G LI           I +  ++
Sbjct: 334 -SGLTDHNFCLWDLDGKEVDCWKGQRSSKTSDFAVSNDGKLIISMNREST---IRLFDRE 389

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
             QERL+ ED+ + + + S  G  L+
Sbjct: 390 TKQERLIEEDNTITSFSLSEDGDFLL 415


>gi|34497535|ref|NP_901750.1| hypothetical protein CV_2080 [Chromobacterium violaceum ATCC 12472]
 gi|34103390|gb|AAQ59752.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 841

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 54/162 (33%), Gaps = 20/162 (12%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQI-- 316
           AP +S++GKR   +    +A++++  D  S    ++        +N    + PD   +  
Sbjct: 130 APLWSADGKRFAFANTTRDAVEVWVGDAASGKIRKIPGIRLNPMLNDELQWMPDQKTLLV 189

Query: 317 --------VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                      +    ++   V  S G   +  + +   +   P       L  +     
Sbjct: 190 KAVPAKLGAAPAQANTQDGPSVQDSGGGKGESSTYETRDTLSSPH---DEALFDY----Y 242

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               + ++     +   L + +       +P G+ ++ S  +
Sbjct: 243 GASQLTLVDAASGKATPLGQPAIYDGVGPAPDGKHILVSSVR 284



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 51/163 (31%), Gaps = 21/163 (12%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALI 274
           P +S + ++ A+A     D + V++ D    +  K  G      +    ++  + K  L+
Sbjct: 131 PLWSADGKRFAFAN-TTRDAVEVWVGDAASGKIRKIPGIRLNPMLNDELQWMPDQKTLLV 189

Query: 275 ----------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
                       Q +        D      E    +       + S    + +F  D  G
Sbjct: 190 KAVPAKLGAAPAQANTQDGPSVQDSGGGKGE----SSTYETRDTLSSPHDEALF--DYYG 243

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             QL ++ +       +   + A Y     +P G  I  +   
Sbjct: 244 ASQLTLVDAASGKATPL--GQPAIYDGVGPAPDGKHILVSSVR 284



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 4/80 (5%)

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER----L 385
           ++   G  +  I+    A    P+WS  G   AF   + +   + V      + R    +
Sbjct: 109 LVSVPGGKETPIALPAGACPDAPLWSADGKRFAFANTTRDAVEVWVGDAASGKIRKIPGI 168

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
            +         W P  ++L+
Sbjct: 169 RLNPMLNDELQWMPDQKTLL 188


>gi|47848311|dbj|BAD22174.1| putative WD repeat protein [Oryza sativa Japonica Group]
          Length = 510

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 78/206 (37%), Gaps = 16/206 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           ++ L   RD++ +  +FS N + +A A+ D   I+     D  +      +      ++ 
Sbjct: 263 VQVLRAHRDEV-WFLQFSNNGKYLASASNDKSAIIWKVDEDGEL-LLKHTLTGHDKPVMM 320

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESD 321
             +S +  + L     +E +  +  D++S     +     I  IS  + PD   I+    
Sbjct: 321 VAWSPDDCQLLTCG-MEEVIRCW--DVESGKCLHVYEKSGIGLISCGWFPDGKHIL---- 373

Query: 322 REG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             G       +   +G +       + +   D   S  G LI           I +  ++
Sbjct: 374 -SGLTDHNFCLWDLDGKEVDCWKGQRSSKTSDFAVSNDGKLIISMNREST---IRLFDRE 429

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
             QERL+ ED+ + + + S  G  L+
Sbjct: 430 TKQERLIEEDNTITSFSLSEDGDFLL 455


>gi|332666413|ref|YP_004449201.1| WD40-like beta Propeller containing protein [Haliscomenobacter
           hydrossis DSM 1100]
 gi|332335227|gb|AEE52328.1| WD40-like beta Propeller containing protein [Haliscomenobacter
           hydrossis DSM 1100]
          Length = 301

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 61/198 (30%), Gaps = 38/198 (19%)

Query: 257 RSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLF-------INISA 307
              +     S +GK A+         ++ ++   L++          F        +I  
Sbjct: 41  DGGVFGLTLSPDGKTAVFVRAYGGRDSLHLFISRLENGNWSTPVRAPFSTLGKNWNDIDP 100

Query: 308 SYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFT 364
           ++SPD   ++F S+R   G+ +      +    KR      EA +   V +     I + 
Sbjct: 101 AFSPDGKFLLFNSNRPLAGRPK---ADFDIWGVKRTQTGWGEAYHLGDVINTDSSDI-YA 156

Query: 365 KFSGEKFAIGVMKKDGSQERL---------------------LVEDSNLQAPTWSPSGRS 403
             +          + G   +L                     +   ++   P  SP    
Sbjct: 157 TVANSGNIYFSSNRAGGLGKLDLYMSVYRNGAYQSPQNLGAEINTQNHDSNPFISPKEDY 216

Query: 404 LIFSR-KKDGDTGSKLYS 420
           LIF R   DG   S LY 
Sbjct: 217 LIFWRQDPDGYGASDLYI 234


>gi|326427191|gb|EGD72761.1| hypothetical protein PTSG_04491 [Salpingoeca sp. ATCC 50818]
          Length = 307

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 3/144 (2%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +S +G   ++S   D+ + ++  D              + +  S   D       S   
Sbjct: 20  AWSKDGSNTILSGSVDDTVKVWRWDHTQLELRHRFEGHNLGV-LSVDIDGKGETAVSS-S 77

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + V   NG    +       + +    SP G  IA    + E   +  ++   S+ 
Sbjct: 78  IDSVINVWDLNGGKLLKSIDTASVNTWTTSLSPDGRYIASGSNTNEV-HLFSVESGKSEG 136

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFS 407
            +        A  WSP  + L  +
Sbjct: 137 TVDTGGKFTSAVKWSPDNQHLACA 160



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 77/239 (32%), Gaps = 29/239 (12%)

Query: 181 SESVVSGIIKNSLCVMDRDGANI--RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           S +++SG + +++ V   D   +  R+     +  +         +    ++ D      
Sbjct: 26  SNTILSGSVDDTVKVWRWDHTQLELRHRFEGHNLGVLSVDIDGKGETAVSSSIDS----V 81

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           + + D    +  K I            S +G+            +++   ++S  +E   
Sbjct: 82  INVWDLNGGKLLKSIDTASVNTWTTSLSPDGRYIA---SGSNTNEVHLFSVESGKSEGTV 138

Query: 299 NTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSN-----GSDQKRISQDKEASYFDP 352
           +T     SA  +SPD+  +   +  +G   L+  +       GSD K    D        
Sbjct: 139 DTGGKFTSAVKWSPDNQHLA-CAGMDGTVSLFNTEGKLQYKFGSDDKSRLHDHSKPVRGL 197

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW------SPSGRSLI 405
            +SP G L+      G    I +      +       S     +W      S  G  ++
Sbjct: 198 SFSPDGSLLYTACDDG---YIKMFDVRSGKI----AGSLSGHSSWVLCVDASIDGEHIV 249



 Score = 37.3 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 18/141 (12%), Positives = 48/141 (34%), Gaps = 12/141 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++S D S  +     +   +++       + +   +             +G+    +   
Sbjct: 20  AWSKDGSNTILSGSVDDTVKVWRWDHTQLELRHRFEGHNLGVLSVDIDGKGETAVSSSID 79

Query: 368 GEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-N 424
                I V   +G +    +     N    + SP GR +       G   ++++   + +
Sbjct: 80  S---VINVWDLNGGKLLKSIDTASVNTWTTSLSPDGRYIA-----SGSNTNEVHLFSVES 131

Query: 425 GRNETLINTPA-YASDPQWVG 444
           G++E  ++T   + S  +W  
Sbjct: 132 GKSEGTVDTGGKFTSAVKWSP 152


>gi|168701190|ref|ZP_02733467.1| WD-40 repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 1126

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 75/227 (33%), Gaps = 23/227 (10%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           ++G  G      +  S   V+     ++ V+D  G  +R LT            S + + 
Sbjct: 737 VSGTSGHLAPFAVAASGERVAVASGATVDVIDPTGKGVRRLTTRATAARL--ALSADGRT 794

Query: 226 VAYATYD----------DEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRA 272
           +A  T+D              + V L D    RA        ++    +AP  S++G+  
Sbjct: 795 LAAVTHDWPPRAPGGGPLPPRVAVELWDVAAGRARPVSVSQTSWDLFQVAPALSADGRWL 854

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVM 331
             +V  + A+ +  V       ++L        + ++SPD   +       G +  + V 
Sbjct: 855 A-AVTWEGAVSLVEVS-SGRTGQQLEC-PERPGALAFSPDGRLLA----AGGTDGAVAVW 907

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                   +  +    +     ++P G  +A     G     GV   
Sbjct: 908 DLATGRLAKRFRGHRGAVVALAFAPDGRRLASGSVDGTALVWGVTDL 954



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/321 (14%), Positives = 89/321 (27%), Gaps = 63/321 (19%)

Query: 112 VTGRVIKEGKDRLRVE-----FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           V   V +    R  V       RL DV   K++    +     + R +A       +   
Sbjct: 512 VFVDVSQSADGRAVVRAASGAVRLVDVASGKELG--SWTVRDGARRGLA-------FLPG 562

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
             E  +     + V        ++ +L +          L    + +    + SP+ + +
Sbjct: 563 GKELVEVEGGRVRVRAPATGAEVRGALPI------PALVLHTLNNNLDVAKQLSPDGKYL 616

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A ++        V + D    R     G  +  I A  FS +G+  L     D A ++  
Sbjct: 617 ATSSLGA-----VTVWDLATGRPAGPRGQVQGGIRAVAFSQDGRSVL--TFADRADEVCV 669

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK--------------EQLYVMQ 332
            D  +              S    P  +  V      G                 + V+ 
Sbjct: 670 WDAATGEP----------GSPLVPPAGTGFVGLGWATGSRPLTLCRPPVPPDPGSIQVLD 719

Query: 333 SNGSDQKRISQDKEASYFDP--------VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                 + ++     ++             +  G+ +A          + V+   G   R
Sbjct: 720 LRTRAAESVALPSGQTWVSGTSGHLAPFAVAASGERVAVAS----GATVDVIDPTGKGVR 775

Query: 385 LLVEDSNLQAPTWSPSGRSLI 405
            L   +       S  GR+L 
Sbjct: 776 RLTTRATAARLALSADGRTLA 796



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/361 (13%), Positives = 108/361 (29%), Gaps = 46/361 (12%)

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVT---GRVIKEGKDRLRVEFRLWDVKDRKQII- 140
           D             RF+   + GA+ +     G+ +        V   LWD    K+++ 
Sbjct: 314 DELPTGAVARIGTDRFRAGRAAGAEDVAFFPDGKTLASVHGGAEVS--LWDAATGKRVLT 371

Query: 141 -----GKKFFSSPASWRKIAHTISDDIY-----QSITGEKGDFNSRILFVSESVVSGIIK 190
                G ++  +  + R++A   + +++              + ++      +V +    
Sbjct: 372 FDGPAGARWVVADPTGRRLAVAGAAEVWVWELGAGAPRVAWTWRAKQTPPQPAVPALAFS 431

Query: 191 NSLCVM---DRDGANIRYLTPS-RDQILFEP----RFSPNQQKVAYATYDDED---ILRV 239
               V+   D DG   R        ++   P      S    K               R+
Sbjct: 432 PDGSVVAAGDWDGKCTRLFNAGTGAEVANLPGRTRAVSAAGGKYLAVICGSGRDAWADRL 491

Query: 240 YLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
              D    RA + +      +      S++G+   +      A+ +  V          T
Sbjct: 492 VFWDAPAGRAARALDAPPGEVFVDVSQSADGR--AVVRAASGAVRLVDV-ASGKELGSWT 548

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--------ISQDKEASYF 350
                    ++ P   ++V   + EG        + G++ +         +         
Sbjct: 549 VRDGARRGLAFLPGGKELV---EVEGGRVRVRAPATGAEVRGALPIPALVLHTLNNNLDV 605

Query: 351 DPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               SP G  +A +       + +   +  G + ++      ++A  +S  GRS++    
Sbjct: 606 AKQLSPDGKYLATSSLGAVTVWDLATGRPAGPRGQV---QGGIRAVAFSQDGRSVLTFAD 662

Query: 410 K 410
           +
Sbjct: 663 R 663



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 67/237 (28%), Gaps = 32/237 (13%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           + T SR   L  P   P+   +            V L   +       +      +    
Sbjct: 694 WATGSRPLTLCRPPVPPDPGSIQVLDLRTRAAESVALPSGQTW-----VSGTSGHLAPFA 748

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--- 321
            +++G+R  ++        +  +D       RLT T       + S D   +   +    
Sbjct: 749 VAASGERVAVAS----GATVDVIDPTGKGVRRLT-TRATAARLALSADGRTLAAVTHDWP 803

Query: 322 ---REGKE-----QLYVMQSNGSDQKRIS---QDKEASYFDPVWSPQGDLIAFTKFSGEK 370
                G        + +        + +S      +     P  S  G  +A   + G  
Sbjct: 804 PRAPGGGPLPPRVAVELWDVAAGRARPVSVSQTSWDLFQVAPALSADGRWLAAVTWEGAV 863

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGR 426
             + V    G   + L       A  +SP GR L       G T   +   DL  GR
Sbjct: 864 SLVEV--SSGRTGQQLECPERPGALAFSPDGRLLA-----AGGTDGAVAVWDLATGR 913



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 69/219 (31%), Gaps = 31/219 (14%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +         L     + + ++VA A+        V ++D    +  +R+    +     
Sbjct: 734 QTWVSGTSGHLAPFAVAASGERVAVAS-----GATVDVIDP-TGKGVRRLTTRATAARL- 786

Query: 264 RFSSNGKRALISV------QKDEAMDIYSV-----DLQSNATERL----TNTLFINISAS 308
             S++G+                      V     D+ +     +    T+     ++ +
Sbjct: 787 ALSADGRTLAAVTHDWPPRAPGGGPLPPRVAVELWDVAAGRARPVSVSQTSWDLFQVAPA 846

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S D   +      EG   L  + S  + Q+    ++  +     +SP G L+A     G
Sbjct: 847 LSADGRWLAAV-TWEGAVSLVEVSSGRTGQQLECPERPGAL---AFSPDGRLLA---AGG 899

Query: 369 EKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
              A+ V      +   R       + A  ++P GR L 
Sbjct: 900 TDGAVAVWDLATGRLAKRFRGHRGAVVALAFAPDGRRLA 938



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 9/81 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A           V + D    R  KR    R  ++A  F+ +G+R   S  
Sbjct: 887 AFSPDGRLLA----AGGTDGAVAVWDLATGRLAKRFRGHRGAVVALAFAPDGRRLA-SGS 941

Query: 278 KDEAMDIYSV----DLQSNAT 294
            D    ++ V    +      
Sbjct: 942 VDGTALVWGVTDLRNAGGGRP 962


>gi|114593211|ref|XP_001158517.1| PREDICTED: WD repeat-containing protein 1 isoform 8 [Pan
           troglodytes]
          Length = 594

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 71/244 (29%), Gaps = 55/244 (22%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   +++P+   +A  + D    LR++    +          F   I    +
Sbjct: 53  IYTEHAHQVVVAKYAPSGFYIA--SGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAW 110

Query: 266 SSNGKRALISVQK--------------------DEAMDIYSVDLQSNATERLTNTLFINI 305
           + + KR  +  +                          I SVD++ +   RL      N 
Sbjct: 111 TEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNC 170

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A +             EG    +              D         +SP G+  A   
Sbjct: 171 AAFF-------------EGPPFKFKFTIG---------DHSRFVNCVRFSPDGNRFATAS 208

Query: 366 FSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G    I +      ++          D  + A +WSP    L+      GD  SK++ 
Sbjct: 209 ADG---QIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLL---SASGDKTSKIWD 262

Query: 421 IDLN 424
           + +N
Sbjct: 263 VSVN 266



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 86/268 (32%), Gaps = 40/268 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTE----HAHQVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 65  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-------GANIRYLTP 208
                          G+       ++   +       L     D       G   ++   
Sbjct: 125 EKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFT 184

Query: 209 SRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
             D   F    RFSP+  + A A+ D     ++Y+ D +       +G  +     I A 
Sbjct: 185 IGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAI 240

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +S +    L S   D+   I+ V + S
Sbjct: 241 SWSPDSTHLL-SASGDKTSKIWDVSVNS 267


>gi|47209012|emb|CAF91370.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 259

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 61/168 (36%), Gaps = 9/168 (5%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            ++++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 34  YSLKFTLAGHTKAVSSVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTISGHKLGI 89

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+    L+S   D+ + I+ ++      + L          +++P S+ IV  S
Sbjct: 90  SDVAWSSD-SNLLVSASDDKTLKIWDLN-SGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS 147

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                E + +         +             ++  G LI  + + G
Sbjct: 148 F---DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDG 192


>gi|322711779|gb|EFZ03352.1| F-box and wd40 domain protein, putative [Metarhizium anisopliae
           ARSEF 23]
          Length = 440

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 39/122 (31%), Gaps = 9/122 (7%)

Query: 207 TPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                  +    +SP +   +A A++D+       + +         I           F
Sbjct: 218 LKGHQDSIMWASWSPTDPNIIASASWDE----SCRIWNAATGECIHSIQGRSGQNWTGDF 273

Query: 266 SSNGKRALISV-QKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESD 321
           S NG++ L +   +  A  I    + +    +   L      +    +SP++  I    +
Sbjct: 274 SPNGEQILFAGRSRSGATHIAIYTVATGTCIQQLELPGLDGWSTPLKWSPNADVIALVIN 333

Query: 322 RE 323
           R 
Sbjct: 334 RS 335



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 38/113 (33%), Gaps = 19/113 (16%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAP 395
           +  + S     WSP    I  +    E   I        +    G   +    D      
Sbjct: 219 KGHQDSIMWASWSPTDPNIIASASWDESCRIWNAATGECIHSIQGRSGQNWTGD------ 272

Query: 396 TWSPSGRSLIFS-RKKDGDTGSKLYSIDLNGRNETLINTPAYA--SDP-QWVG 444
            +SP+G  ++F+ R + G T   +Y++   G     +  P     S P +W  
Sbjct: 273 -FSPNGEQILFAGRSRSGATHIAIYTV-ATGTCIQQLELPGLDGWSTPLKWSP 323



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 37/111 (33%), Gaps = 9/111 (8%)

Query: 307 ASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT- 364
           AS+SP D + I   S     E   +  +   +     Q +    +   +SP G+ I F  
Sbjct: 228 ASWSPTDPNIIASAS---WDESCRIWNAATGECIHSIQGRSGQNWTGDFSPNGEQILFAG 284

Query: 365 KFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKD 411
           +       I +     G+  + L         T   WSP+   +     + 
Sbjct: 285 RSRSGATHIAIYTVATGTCIQQLELPGLDGWSTPLKWSPNADVIALVINRS 335


>gi|310641692|ref|YP_003946450.1| hypothetical protein PPSC2_c2237 [Paenibacillus polymyxa SC2]
 gi|309246642|gb|ADO56209.1| hypothetical protein PPSC2_c2237 [Paenibacillus polymyxa SC2]
          Length = 294

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 13/119 (10%)

Query: 313 SSQIVFESDREGKEQL---YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            S++V  +  EG + +   + M S+G+  ++I            WSP G  IAF      
Sbjct: 161 GSRLVLINLSEGAQTIVNMFEMNSDGAGSEKID--------AYNWSPDGKKIAFGIGDLG 212

Query: 370 KFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              IGV   +      + +   + + +  W   G+S  F  K D    + LY+     +
Sbjct: 213 SSYIGVYDVERKSYTHVSDKDFTLISSIVWHKDGKSFDFVSKGDDSPQAILYTYSETKK 271



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 32/105 (30%), Gaps = 10/105 (9%)

Query: 269 GKRALISVQKDEAMDI---YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           G R ++    + A  I   + ++     +E++      N    +SPD  +I F     G 
Sbjct: 161 GSRLVLINLSEGAQTIVNMFEMNSDGAGSEKI---DAYN----WSPDGKKIAFGIGDLGS 213

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             + V          +S          VW   G    F     + 
Sbjct: 214 SYIGVYDVERKSYTHVSDKDFTLISSIVWHKDGKSFDFVSKGDDS 258



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 42/120 (35%), Gaps = 10/120 (8%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
                  SR++ ++ S  +  I N +  M+ DGA    +            +SP+ +K+A
Sbjct: 155 HVSDHEGSRLVLINLSEGAQTIVN-MFEMNSDGAGSEKIDAYN--------WSPDGKKIA 205

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +   D      + + D              ++I +  +  +GK      + D++      
Sbjct: 206 FGIGDLGSSY-IGVYDVERKSYTHVSDKDFTLISSIVWHKDGKSFDFVSKGDDSPQAILY 264



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 1/64 (1%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
           +S +GK+    +    +  I   D++  +   +++  F  IS+  +  D     F S  +
Sbjct: 197 WSPDGKKIAFGIGDLGSSYIGVYDVERKSYTHVSDKDFTLISSIVWHKDGKSFDFVSKGD 256

Query: 324 GKEQ 327
              Q
Sbjct: 257 DSPQ 260


>gi|47086031|ref|NP_998390.1| aladin [Danio rerio]
 gi|45768556|gb|AAH67671.1| Achalasia, adrenocortical insufficiency, alacrimia [Danio rerio]
          Length = 499

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/247 (17%), Positives = 81/247 (32%), Gaps = 22/247 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    D  +    + P+  K A A  DD     + +       AP      +  + A +
Sbjct: 135 QMLDWSDSAVRSFSWHPHTDKFAVALLDD----SIKIYKPHSSTAPTLKHRCQRSVCALQ 190

Query: 265 FSSN-GKRALISVQKDEAMDIYSVDLQSNATE------RLTNTLFIN--ISASYSPDSSQ 315
           +    G    ++ Q    + I+ VD  S +T       ++ +    +   S ++SP  S 
Sbjct: 191 WKPLCGSALAVACQSC--LLIWHVDPASLSTRPSSGCAQVLSHPGHSPITSIAWSPTGSL 248

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +V  S  +    + V          + +          WSP G  +         F +  
Sbjct: 249 LVSASPVD--TAMMVWDVAAESCVPLRRVGGGGVTFLSWSPDGSRLL-AATPSALFRVWE 305

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE--TLINT 433
            +     ER      + Q+  WSP G  L+    +       L   DL G  +  T++  
Sbjct: 306 TRMWT-CERWPCLKGSCQSACWSPDGACLL-LSIQGERLIYALSFSDLTGGPKAATVVAD 363

Query: 434 PAYASDP 440
            +  S P
Sbjct: 364 LSETSFP 370



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 65/181 (35%), Gaps = 30/181 (16%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + L+      +    +SP    +  A+   +  + V+ +        +R+G     +  
Sbjct: 226 AQVLSHPGHSPITSIAWSPTGSLLVSAS-PVDTAMMVWDVAAESCVPLRRVG--GGGVTF 282

Query: 263 PRFSSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS---- 314
             +S +G R L     ++ +     +++        ER         SA +SPD +    
Sbjct: 283 LSWSPDGSRLLAATPSALFRVWETRMWTC-------ERWPCLKGSCQSACWSPDGACLLL 335

Query: 315 -----QIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIA 362
                ++++    SD  G  +   + ++ S+      + + +    V    W P+G+ +A
Sbjct: 336 SIQGERLIYALSFSDLTGGPKAATVVADLSETSFPGPEGDLTVGGEVCSLSWDPRGERLA 395

Query: 363 F 363
            
Sbjct: 396 V 396


>gi|15082090|gb|AAK84029.1|AF394229_1 surface antigen [Methanosarcina mazei]
          Length = 1673

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 90/257 (35%), Gaps = 24/257 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            S + ++G+  N++ V +  G N    T            SP+  +V     +      V
Sbjct: 432 PSYAYITGLNSNTVSVFN-TGNNTLAKTVPVGNDPMGVAISPDGTRVYVTNTNYGYRGSV 490

Query: 240 YLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            ++DT        +        +P     + +GK+  +S +  +   +  +D  +N    
Sbjct: 491 SVIDTARGEVITIVDV--GNKYSPCGIAVTPDGKKLYVSDR--DINGVSVIDTSTNTVTA 546

Query: 297 LTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            T    IN +  + +PD  +  + ++R     + V+ +  +++    +          ++
Sbjct: 547 -TVPAGINPLGVAITPDGRK-AYVANR-YSNNVSVIDTVTNNEIAAVKVGTGPCGV-SFN 602

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDG 412
             G  +  T       ++     D +   +    +  + P   + SP G  +  + ++  
Sbjct: 603 QDGTRLYVTNCESNSVSV----IDTATNTVTDTLAVEKWPLGVSVSPDGTKIYVANERSN 658

Query: 413 DTGSKLYSIDLNGRNET 429
           +       ID   +N T
Sbjct: 659 NVS----VIDAETKNVT 671



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 82/227 (36%), Gaps = 21/227 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+    N + ++D    N+    P+          SP+ ++V Y T      L V    +
Sbjct: 90  VANAHSNDVSIIDTATNNVIATVPAGSSPQGV-AVSPDGKQV-YVTNMASSTLSVIDTTS 147

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                  + G      L    S +GK+  ++   +    +  ++  + A   + NT+ + 
Sbjct: 148 NTVAGTVKTGKSP---LGLALSPDGKKLYVT--NNGDKTVSVINTVTKA---VINTVSVG 199

Query: 305 ISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            S    + +PD ++ V+ ++ +    + V+ +  +     +   EA+      +P+G   
Sbjct: 200 RSPKGIAVTPDGTK-VYVANFD-SMSISVIDTVTNSVID-TVKVEAAPSGIAVNPEGTK- 255

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLI 405
           A+     + F   V   D    ++         P     +P G+ + 
Sbjct: 256 AYVTNVDKYFN-TVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVY 301



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 64/176 (36%), Gaps = 16/176 (9%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G      +   E+ +I  +D+ SN            + A  SPD ++ V+ ++      +
Sbjct: 41  GASTFAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTK-VYVAN-AHSNDV 98

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            ++ +  ++    +    +S      SP G  +  T  +     + V+    +     V+
Sbjct: 99  SIIDTATNNVIA-TVPAGSSPQGVAVSPDGKQVYVTNMASST--LSVIDTTSNTVAGTVK 155

Query: 389 DSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
               ++P     SP G+ L +       T S +     N   + +INT +    P+
Sbjct: 156 TG--KSPLGLALSPDGKKL-YVTNNGDKTVSVI-----NTVTKAVINTVSVGRSPK 203



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 75/229 (32%), Gaps = 21/229 (9%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL---- 214
            + I+   T  K    +  +F+     +G    +  + + +  NI  +  + +++     
Sbjct: 13  CNQIFGGKTFNKIVGITAFVFLMLIGTAGASTFA-YIANSESDNISVIDVTSNKVTATIP 71

Query: 215 -----FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
                     SP+  KV  A     D+  +      +        + + +      S +G
Sbjct: 72  VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGV----AVSPDG 127

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           K+  ++     +  +  +D  SN       T    +  + SPD  ++   ++  G + + 
Sbjct: 128 KQVYVT--NMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNN--GDKTVS 183

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           V+ +        +     S      +P G  +    F     +I V+  
Sbjct: 184 VINTVTKAVIN-TVSVGRSPKGIAVTPDGTKVYVANFD--SMSISVIDT 229


>gi|268574014|ref|XP_002641984.1| C. briggsae CBR-TAG-125 protein [Caenorhabditis briggsae]
 gi|212288547|sp|A8X8C6|TG125_CAEBR RecName: Full=WD repeat-containing protein tag-125
 gi|187032035|emb|CAP28887.1| CBR-WDR-5 protein [Caenorhabditis briggsae AF16]
          Length = 368

 Score = 50.0 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 84/240 (35%), Gaps = 21/240 (8%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +        + +   +FSP  + +  ++ D      V + +       + +   +  
Sbjct: 68  GYKLISTIEGHTKSISAVKFSPCGKFLGTSSADK----TVKIWNMSDLSCERTLTGHKLG 123

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +    +S++ K  + +   D+ + IY V       + L          +++P SS +V  
Sbjct: 124 VNDFAWSADSKSIV-TASDDKTLKIYEVPTV-KMAKTLKGHTNYVFCCNFNPQSSLVVSG 181

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         +             ++  G LI    + G    + +    
Sbjct: 182 SF---DESVRIWDVRTGMCVKTLPAHSDPVSAVSFNRDGSLITSGSYDG---LVRIWDTA 235

Query: 380 GSQ-ERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             Q  + LV+D N  +    +SP+G+ ++     + D   KL+     G+ +TL     +
Sbjct: 236 NGQCVKTLVDDENPPVAFVKFSPNGKYIL---SSNLDNTLKLWDF---GKGKTLKQYQGH 289


>gi|294811424|ref|ZP_06770067.1| Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Streptomyces
           clavuligerus ATCC 27064]
 gi|326440005|ref|ZP_08214739.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Streptomyces clavuligerus ATCC 27064]
 gi|294324023|gb|EFG05666.1| Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Streptomyces
           clavuligerus ATCC 27064]
          Length = 719

 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 83/278 (29%), Gaps = 62/278 (22%)

Query: 203 IRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            R L  +    L  PR    SP+ ++V +      D     L         + + +  ++
Sbjct: 19  PRQLARTHRFSLGVPRRFTVSPDGERVLFLRSTRGDDPVSRLW-LYSGGRERMLADPTAL 77

Query: 260 ILA----------------------PRFSSNG--KRALISVQKDEAMDIYSVDLQSNATE 295
             A                        ++++   + A  ++       ++ V     A  
Sbjct: 78  DGAEGEVPEAERALRERTRETASGVVAYATDAEVRLAAFAL----GGVVWVVTTDGAAPR 133

Query: 296 RLTNTLFINISASYSPDSSQIVFESD--------REGKEQLYVM----QSNGSDQKRISQ 343
           R+T T         SPD   + + S         R G ++L              +  + 
Sbjct: 134 RIT-TAGPVTDPRPSPDGRWVAYVSGGSFRVVGVRGGGDRLLAAPDGPDVTHGLPEHAAA 192

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
           +         WSP  D +  T+          +     + R L + ++   P   P  R 
Sbjct: 193 ESMGRTRGHWWSPGSDALLVTR----------VDTARVERRYLTDPADPAQP---P--RV 237

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           + +      +    L  I L+G     +  PA+A DP 
Sbjct: 238 IPYPAAGTANADVSLELIRLDGTRL-PVRLPAHA-DPA 273


>gi|205325940|gb|ACI03097.1| beta transducin-like protein [Polyporus grammocephalus]
          Length = 165

 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 51/135 (37%), Gaps = 6/135 (4%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + +G    ++ + D    +      +    + + +FSP+ + V  A++D      V + 
Sbjct: 4   RIATGSYDGTVRIWDVQTGDTLVSLEAHTDWVRDVQFSPDGKWVLSASFD----WTVRVW 59

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D+        +      +L   FS NG+    S  +D+ + ++ + +        T    
Sbjct: 60  DSITGEKKLDLDGHTDWVLRACFSPNGEYVA-SASRDKTVRLWRL-VDGLCVATFTEHRG 117

Query: 303 INISASYSPDSSQIV 317
                ++SPDS  + 
Sbjct: 118 WVRHVAFSPDSEYLA 132



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 45/157 (28%), Gaps = 27/157 (17%)

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
           +          R+WDV+    ++  +           AHT  D +        G +    
Sbjct: 4   RIATGSYDGTVRIWDVQTGDTLVSLE-----------AHT--DWVRDVQFSPDGKW---- 46

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
                 V+S     ++ V D      +         +    FSPN + VA A+ D     
Sbjct: 47  ------VLSASFDWTVRVWDSITGEKKLDLDGHTDWVLRACFSPNGEYVASASRDK---- 96

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            V L               R  +    FS + +   +
Sbjct: 97  TVRLWRLVDGLCVATFTEHRGWVRHVAFSPDSEYLAL 133



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 41/133 (30%), Gaps = 9/133 (6%)

Query: 275 SVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +   D  + I+  D+Q+      L           +SPD   ++  S       + V  S
Sbjct: 7   TGSYDGTVRIW--DVQTGDTLVSLEAHTDWVRDVQFSPDGKWVLSASF---DWTVRVWDS 61

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNL 392
              ++K              +SP G+ +A            ++  DG       E    +
Sbjct: 62  ITGEKKLDLDGHTDWVLRACFSPNGEYVASASRDKTVRLWRLV--DGLCVATFTEHRGWV 119

Query: 393 QAPTWSPSGRSLI 405
           +   +SP    L 
Sbjct: 120 RHVAFSPDSEYLA 132


>gi|261403986|ref|YP_003240227.1| oligogalacturonide lyase [Paenibacillus sp. Y412MC10]
 gi|261280449|gb|ACX62420.1| oligogalacturonide lyase [Paenibacillus sp. Y412MC10]
          Length = 381

 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 12/125 (9%)

Query: 289 LQSNATERLTNTLF-----INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           L      +LT+              +   S +++F SDRE    LY M  N  +  +++ 
Sbjct: 18  LTGVEVVQLTDYKAHSHHLYFTENGWYDGSKRLLFVSDRENSSNLYSMDVNSGEMLQLTD 77

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPS 400
             +  + D    P G   AF K       + ++  +        E     NL  P     
Sbjct: 78  YPDNDFVDACLLPDGRA-AFVKTGRSVRRLDLVTLEEELVYEAPEGYNIGNLSCPA---D 133

Query: 401 GRSLI 405
           GRS++
Sbjct: 134 GRSVV 138



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 52/135 (38%), Gaps = 11/135 (8%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG-----KRALISVQKDEAMDIYSVDL 289
              R    D        ++ ++++      F+ NG     KR L    ++ + ++YS+D+
Sbjct: 8   KPERKQYRDRLTGVEVVQLTDYKAHSHHLYFTENGWYDGSKRLLFVSDRENSSNLYSMDV 67

Query: 290 QSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            S    +LT+    + + A   PD  +  F   + G+  +  +     +++ + +  E  
Sbjct: 68  NSGEMLQLTDYPDNDFVDACLLPDG-RAAFV--KTGRS-VRRLDLVTLEEELVYEAPEGY 123

Query: 349 YFDPVWSP-QGDLIA 362
               +  P  G  + 
Sbjct: 124 NIGNLSCPADGRSVV 138



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 52/156 (33%), Gaps = 19/156 (12%)

Query: 284 IYSVDLQSNATERLTN--TLFINISASYS-PDSSQIVFESDREGKEQLY---VMQSNGSD 337
           I+ +DL++    R+         +   +  PD   I +   R      +      +   +
Sbjct: 221 IWGLDLRNGEVWRIRQRLEPGEKVGHEFFYPDGVTIGYHGFRTDGTNFFGSIRYDNTAME 280

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVE------- 388
           +     D   +Y D +    G  +   K + +  ++      G     R+L E       
Sbjct: 281 ETDFGFDTWHAYADGL----GQAVVDGKGAVKTLSVWRKDAQGVYQGPRMLCELRCSFHS 336

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                 P + P G+ L+F+  K+G     L  +  +
Sbjct: 337 QKVHAHPRFDPDGKRLLFTSDKNGYGNLYLVDMPED 372



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 15/127 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y     +  +F   I + + ++              DG   + +   +  +     +  +
Sbjct: 258 YHGFRTDGTNFFGSIRYDNTAMEETDFGFDTWHAYADGLG-QAVVDGKGAVKTLSVWRKD 316

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            Q V                  R+    +   + + +   PRF  +GKR L +  K+   
Sbjct: 317 AQGVY--------------QGPRMLCELRCSFHSQKVHAHPRFDPDGKRLLFTSDKNGYG 362

Query: 283 DIYSVDL 289
           ++Y VD+
Sbjct: 363 NLYLVDM 369


>gi|168701051|ref|ZP_02733328.1| NB-ARC domain protein [Gemmata obscuriglobus UQM 2246]
          Length = 491

 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 34/246 (13%), Positives = 74/246 (30%), Gaps = 42/246 (17%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E  LWDV   +              R+      D +    T        R         +
Sbjct: 243 ELTLWDVAKGEP-------------RQRVGGFVDRV---CTIAYSADGKRFA---TGGGA 283

Query: 187 GIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                 + V D   A +   +       +F   FSP+ + +A  T   +  ++V+ +   
Sbjct: 284 PTEDGEIKVFDAGTAKLFAEIKAGHSDTVFGVTFSPDGKLLA--TGGADKFVKVFELPAE 341

Query: 246 IDRAPKRIGNFRSM---ILAPRFSSNGKRAL------ISVQKDEAMDIYSVDLQSNATER 296
           + +  K + +F      ++   ++ +GK+             D        D+Q    ++
Sbjct: 342 VGQPAKFVKSFEGHTHHVMGVGWTPDGKKLASCGADNFVKVWDYEKGEKIRDMQ-GHQKQ 400

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T   F+              F +   G   + +  ++     R         +    SP
Sbjct: 401 VTALAFV---------GKTSQFVTG-SGDASVRMWNADNGGNVRSFPGASDFVYAVSASP 450

Query: 357 QGDLIA 362
            G+++ 
Sbjct: 451 DGEVVV 456



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 51/151 (33%), Gaps = 12/151 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SV 276
            FSP+ + +A           + L D       +R+G F   +    +S++GKR      
Sbjct: 228 AFSPDGKTLA-----TGSFQELTLWDVAKGEPRQRVGGFVDRVCTIAYSADGKRFATGGG 282

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSN 334
              E  +I   D  +            +     ++SPD   +      +   +++ + + 
Sbjct: 283 APTEDGEIKVFDAGTAKLFAEIKAGHSDTVFGVTFSPDGKLLA-TGGADKFVKVFELPAE 341

Query: 335 GSDQKRISQDKEASYFDPV---WSPQGDLIA 362
                +  +  E      +   W+P G  +A
Sbjct: 342 VGQPAKFVKSFEGHTHHVMGVGWTPDGKKLA 372



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 55/160 (34%), Gaps = 21/160 (13%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--YSPDSSQ 315
           S++ +  FS +GK       ++  +     D+      +     F++   +  YS D  +
Sbjct: 222 SLVESMAFSPDGKTLATGSFQELTLW----DVAKGEPRQRV-GGFVDRVCTIAYSADGKR 276

Query: 316 IVFESDREGKE----QLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
                   G      ++ V  +  +     I      + F   +SP G L+A T  + + 
Sbjct: 277 FA---TGGGAPTEDGEIKVFDAGTAKLFAEIKAGHSDTVFGVTFSPDGKLLA-TGGADKF 332

Query: 371 FAIGVMKKDGSQERLLV-----EDSNLQAPTWSPSGRSLI 405
             +  +  +  Q    V        ++    W+P G+ L 
Sbjct: 333 VKVFELPAEVGQPAKFVKSFEGHTHHVMGVGWTPDGKKLA 372


>gi|195121738|ref|XP_002005376.1| GI19111 [Drosophila mojavensis]
 gi|193910444|gb|EDW09311.1| GI19111 [Drosophila mojavensis]
          Length = 373

 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 79/252 (31%), Gaps = 25/252 (9%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +D   + +      F         +    +I N + V+   G +++Y      +     R
Sbjct: 31  ADSSVEQLFKMPLPFKEP-----STEEKTVINNKIEVVSP-GYDLKYTLEGHTRQTTAVR 84

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP  + ++ A+ +      + + D    +    +      I    +S +GK  + S   
Sbjct: 85  FSPGGEWLSSASTNG----VLNMWDVDTAKLHNTMTGHSLGINDVAWSPDGKFIV-SCSD 139

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D+ + ++   L     +          S S  P S+ I   S       + +        
Sbjct: 140 DKTIKMWD-PLTGQCQKSFIGHNRYVFSCSVHPQSNLIASTSF---DCSVRLWDVRNGKA 195

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPT- 396
             +            ++  G L     F G    I     D    ++L        +P  
Sbjct: 196 LNMILAHMDPISSVDFNRDGSLFVTGSFDG-LVRIW----DTISCQVLKTLIDEDNSPVG 250

Query: 397 ---WSPSGRSLI 405
              ++P+GR ++
Sbjct: 251 YVKFAPNGRYIL 262


>gi|172045623|sp|A8AJ27|6PGL_CITK8 RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
          Length = 331

 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 73/235 (31%), Gaps = 18/235 (7%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 2   KQTVYTASPESQQIHVWSLNHDGSLKLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 61

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPD-SSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
            Y +     A         +  S +  S D   + VF  S   G   + V + +      
Sbjct: 62  AYRIAPDDGALT-FAAESALPGSPTHISTDHQGRFVFVGSYNAGN--VSVTRLDDGLPAG 118

Query: 341 ISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNL 392
           +    E          SP    +       ++  +  +  DG        E   VE +  
Sbjct: 119 VVDVVEGLEGCHSANISPDNRTLWVPALKQDRICLFTLSDDGKLVAQEPAEVTTVEGAGP 178

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
           +   + P+ +   +   +   +       D +G  E   TL   PA  SD +W  
Sbjct: 179 RHMAFHPN-QQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPADFSDTRWAA 232



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 33/269 (12%), Positives = 74/269 (27%), Gaps = 23/269 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
             +   DGA       +              + V   +Y+  ++    L D         
Sbjct: 63  YRIAPDDGALTFAAESALPGSPTHISTDHQGRFVFVGSYNAGNVSVTRLDDGLPAGVVDV 122

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-----ATERLTNTLFINISA 307
           +        A   S + +   +   K + + ++++            E  T         
Sbjct: 123 VEGLEGCHSA-NISPDNRTLWVPALKQDRICLFTLSDDGKLVAQEPAEVTTVEGAGPRHM 181

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVW------SPQGD 359
           ++ P+       ++      ++ ++    + + +       A + D  W      +P G 
Sbjct: 182 AFHPNQQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPADFSDTRWAADIHITPDGR 241

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPS--GRSLIFSRKKDGDTGS 416
            +     +     +  + +DGS             P  ++    G+ LI      G    
Sbjct: 242 HLYACDRTASLITVFSVSEDGSVLTKEGFQPTETQPRGFNVDHSGKYLI----AAGQKSH 297

Query: 417 KLYSIDLNGRNETLINTPAYA--SDPQWV 443
            +    + G    L     YA    P WV
Sbjct: 298 HIAVYAIAGEQGLLTEKGRYAVGQGPMWV 326


>gi|85679501|gb|ABC72084.1| dipeptidylpeptidase 4 [Mustela putorius furo]
          Length = 765

 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 47/133 (35%), Gaps = 28/133 (21%)

Query: 265 FSSNGKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVF 318
            S +G+  L+      +       S D+   A  RL     I  +    ++SP+  ++ +
Sbjct: 106 VSPDGQFILLEYNYMKQWRHSYTASYDIYDLAKRRLITEDKIPDNTQWITWSPEGHKLAY 165

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEAS------------------YFDPVWSPQGDL 360
                    +YV     S  +RI+   + +                  Y    WSP+G  
Sbjct: 166 V----WNNDIYVKNEPNSTSQRITWTGKENVISNGITDWVYEEEIFSAYSALWWSPKGTF 221

Query: 361 IAFTKFSGEKFAI 373
           +A+ +F+  +  +
Sbjct: 222 LAYAQFNDTEVPL 234


>gi|59802598|gb|AAX07534.1| WD-repeat protein [Gemmata sp. Wa1-1]
          Length = 419

 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 43/248 (17%), Positives = 80/248 (32%), Gaps = 25/248 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQ--ILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           SG     L  +   G  +R +    DQ   +    FS +   VA    D +    V   D
Sbjct: 122 SGNDDLLLWDVK-TGQLLRRIEQPADQQSWVTAIAFSADGGTVASGHDDGK----VRFWD 176

Query: 244 TRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTL 301
           T   +    I       +A   FS NG          E + +   D +++     L +  
Sbjct: 177 TAAYKLVGEIAAHPRKGIAAIAFSPNG---AFVATAGEDLSVRVWDAETHKPVAELKSHT 233

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               + ++SPDS+ ++            V +    D   +            +SP+G  +
Sbjct: 234 DRVPALTWSPDSTLLI---SAGWDTSARVWRPTHPDPLMLLNSHADQVVTVAFSPEGKYL 290

Query: 362 AFTKFSGEKFAIGVM---KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           A    +   F I +    +       L   +  ++   +SP G  L        D    +
Sbjct: 291 A---CADSDFDIHLWLDAEAATRGPVLRGHNDEIRCLAFSPDGTKLA---SAGADRVVHV 344

Query: 419 YSIDLNGR 426
           + +  +G+
Sbjct: 345 WDVR-DGK 351



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/294 (16%), Positives = 85/294 (28%), Gaps = 43/294 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G  +  G D  +V F  WD    K +         A  RK    I+           G F
Sbjct: 160 GGTVASGHDDGKVRF--WDTAAYKLVGE-----IAAHPRKGIAAIA-------FSPNGAF 205

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                     V +     S+ V D +         S    +    +SP+   +  A +D 
Sbjct: 206 ----------VATAGEDLSVRVWDAETHKPVAELKSHTDRVPALTWSPDSTLLISAGWDT 255

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                  +           + +    ++   FS  GK        D  + ++   L + A
Sbjct: 256 ----SARVWRPTHPDPLMLLNSHADQVVTVAFSPEGKYLA-CADSDFDIHLW---LDAEA 307

Query: 294 TERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             R       N      ++SPD +++       G +++  +  +  D K I+        
Sbjct: 308 ATRGPVLRGHNDEIRCLAFSPDGTKLA----SAGADRVVHVW-DVRDGKLIAGPNPRGRH 362

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                P   L      S     + V   +   E       +  +   SP G+ L
Sbjct: 363 AIAIIPGAPL---RLASSGAANVRVWDVESGDEVAPTNLCSAFSVAASPDGKWL 413



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 72/227 (31%), Gaps = 41/227 (18%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +    T      +     + +   PRF ++G  A I+   D +  + S+D ++       
Sbjct: 37  ITTTHTEDSAPVRPSPLVKRVFCEPRFHTDGDIAAIAFSADGS--LLSID-EAGVLR--- 90

Query: 299 NTLFINISASYSPDSSQIV--FESD--------------REGKEQLYVMQSNGSD-QKRI 341
                     ++PD +Q+   F SD                G + L +         +RI
Sbjct: 91  ---------HWAPDGTQLARHFLSDIETLWCFSAGAKLLASGNDDLLLWDVKTGQLLRRI 141

Query: 342 SQ--DKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPTW 397
            Q  D+++      +S  G  +A     G+   +     K  G  E        + A  +
Sbjct: 142 EQPADQQSWVTAIAFSADGGTVASGHDDGKVRFWDTAAYKLVG--EIAAHPRKGIAAIAF 199

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           SP+G    F      D   +++  + +     L +         W  
Sbjct: 200 SPNG---AFVATAGEDLSVRVWDAETHKPVAELKSHTDRVPALTWSP 243



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 77/225 (34%), Gaps = 36/225 (16%)

Query: 219 FSPNQQKVAYATYDD---------------EDILRVYLMDTRIDRAPKRI---GNFRSMI 260
           ++P+  ++A     D                    + L D +  +  +RI    + +S +
Sbjct: 92  WAPDGTQLARHFLSDIETLWCFSAGAKLLASGNDDLLLWDVKTGQLLRRIEQPADQQSWV 151

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE 319
            A  FS++G     S   D  +  +           +       I+A ++SP+     F 
Sbjct: 152 TAIAFSADGGTVA-SGHDDGKVRFWDT-AAYKLVGEIAAHPRKGIAAIAFSPNG---AFV 206

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMK 377
           +       + V  +     K +++ K  +   P   WSP   L+     +G   +  V +
Sbjct: 207 ATAGEDLSVRVWDAET--HKPVAELKSHTDRVPALTWSPDSTLLI---SAGWDTSARVWR 261

Query: 378 KDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
                  +L+     Q  T  +SP G+ L  +   D D    L+ 
Sbjct: 262 PTHPDPLMLLNSHADQVVTVAFSPEGKYLACA---DSDFDIHLWL 303


>gi|21228572|ref|NP_634494.1| putative surface layer protein [Methanosarcina mazei Go1]
 gi|20907064|gb|AAM32166.1| putative surface layer protein [Methanosarcina mazei Go1]
          Length = 1673

 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 90/257 (35%), Gaps = 24/257 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            S + ++G+  N++ V +  G N    T            SP+  +V     +      V
Sbjct: 432 PSYAYITGLNSNTVSVFN-TGNNTLAKTVPVGNDPMGVAISPDGTRVYVTNTNYGYRGSV 490

Query: 240 YLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            ++DT        +        +P     + +GK+  +S +  +   +  +D  +N    
Sbjct: 491 SVIDTARGEVITIVDV--GNKYSPCGIAVTPDGKKLYVSDR--DINGVSVIDTSTNTVTA 546

Query: 297 LTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            T    IN +  + +PD  +  + ++R     + V+ +  +++    +          ++
Sbjct: 547 -TVPAGINPLGVAITPDGRK-AYVANR-YSNNVSVIDTVTNNEIAAVKVGTGPCGV-SFN 602

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDG 412
             G  +  T       ++     D +   +    +  + P   + SP G  +  + ++  
Sbjct: 603 QDGTRLYVTNCESNSVSV----IDTATNTVTDTLAVEKWPLGVSVSPDGTKIYVANERSN 658

Query: 413 DTGSKLYSIDLNGRNET 429
           +       ID   +N T
Sbjct: 659 NVS----VIDAETKNVT 671



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 34/226 (15%), Positives = 84/226 (37%), Gaps = 19/226 (8%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+    N + ++D    N+    P+          SP+ ++V Y T      L V    +
Sbjct: 90  VANAHSNDVSIIDTATNNVIATVPAGSSPQGV-AVSPDGKQV-YVTNMASSTLSVIDTTS 147

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                  + G      L    S +GK+  ++   +    +  ++  + A   + NT+ + 
Sbjct: 148 NTVAGTVKTGKSP---LGLALSPDGKKLYVT--NNGDKTVSVINTVTKA---VINTVSVG 199

Query: 305 ISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            S    + +PD ++ V+ ++ +    + V+ +  +     +   EA+      +P+G   
Sbjct: 200 RSPKGIAVTPDGTK-VYVANFD-SMSISVIDTVTNSVID-TVKVEAAPSGIAVNPEGTK- 255

Query: 362 AFTKFSGEKFA-IGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLI 405
           A+     + F  + V+    ++    +    +      +P G+ + 
Sbjct: 256 AYVTNVDKYFNTVSVIDTGTNKITARIPVGPDPAGIAVTPDGKKVY 301



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 64/176 (36%), Gaps = 16/176 (9%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G      +   E+ +I  +D+ SN            + A  SPD ++ V+ ++      +
Sbjct: 41  GASTFAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTK-VYVAN-AHSNDV 98

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            ++ +  ++    +    +S      SP G  +  T  +     + V+    +     V+
Sbjct: 99  SIIDTATNNVIA-TVPAGSSPQGVAVSPDGKQVYVTNMASST--LSVIDTTSNTVAGTVK 155

Query: 389 DSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
               ++P     SP G+ L +       T S +     N   + +INT +    P+
Sbjct: 156 TG--KSPLGLALSPDGKKL-YVTNNGDKTVSVI-----NTVTKAVINTVSVGRSPK 203



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 31/229 (13%), Positives = 75/229 (32%), Gaps = 21/229 (9%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL---- 214
            + I+   T  K    +  +F+     +G    +  + + +  NI  +  + +++     
Sbjct: 13  CNQIFGGKTFNKIVGITAFVFLMLIGTAGASTFA-YIANSESDNISVIDVTSNKVTATIP 71

Query: 215 -----FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
                     SP+  KV  A     D+  +      +        + + +      S +G
Sbjct: 72  VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGV----AVSPDG 127

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           K+  ++     +  +  +D  SN       T    +  + SPD  ++   ++  G + + 
Sbjct: 128 KQVYVT--NMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNN--GDKTVS 183

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           V+ +        +     S      +P G  +    F     +I V+  
Sbjct: 184 VINTVTKAVIN-TVSVGRSPKGIAVTPDGTKVYVANFD--SMSISVIDT 229


>gi|71003369|ref|XP_756365.1| hypothetical protein UM00218.1 [Ustilago maydis 521]
 gi|46095802|gb|EAK81035.1| hypothetical protein UM00218.1 [Ustilago maydis 521]
          Length = 636

 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/216 (15%), Positives = 68/216 (31%), Gaps = 17/216 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+ P+ +++   +   E      L +         +    S + A  +  +G    IS  
Sbjct: 192 RWMPDGRRLLTGSTSGEFT----LWNGLTFNFETIMQAHDSAVRAMAWCKSGTFL-ISAD 246

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           ++  +  +  +L +   +  T         ++SPD S+     D      L +   + S 
Sbjct: 247 QNGTVKYFQSNLNT--LQSFTAHTDSARGLAWSPDDSKFASGGD---DSLLKIWDFDSSK 301

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQA 394
           Q R             W     ++  +        +   +       L       + +QA
Sbjct: 302 QIRELSGHGWDVKCLDWHASKGMLI-SGSKDNLVKVWDPRATPGGTCLATFHNHKNTVQA 360

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             +SP G     + +   D   KLY + +     TL
Sbjct: 361 CKFSPDGLRFATASR---DMTVKLYDLRMMAEQTTL 393


>gi|34922584|sp|Q8VEJ4|NLE1_MOUSE RecName: Full=Notchless protein homolog 1
 gi|17390943|gb|AAH18399.1| Notchless homolog 1 (Drosophila) [Mus musculus]
          Length = 485

 Score = 50.0 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 158

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGS-DQKRISQDKEASYFDPVW-----S 355
            +S S+SPD  ++       G    Q+ +   +      R             W     +
Sbjct: 159 VLSISWSPDGKKLA-----SGCKNGQILLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMN 213

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + V     G  ER+L     ++    W   G  L++S  +D
Sbjct: 214 PECRYVASSSKDGS---VRVWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 266



 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASF---DKSI 396

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLATDLPGH 455

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 456 ADEVYAVDWSPDGQRVA 472



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 131 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA---SGCKNGQILLWDPST 187

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ ++           LT  
Sbjct: 188 GLQVGRTLTGHSKWITGLSWEPLHMNPECRYVA-SSSKDGSVRVWDT-TAGRCERILTGH 245

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 246 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 37/100 (37%), Gaps = 6/100 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++LF  +S +         +   DG   +YL         +++  +S + + +   + D 
Sbjct: 377 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 436

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                + + D +  +    +      + A  +S +G+R  
Sbjct: 437 ----TLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVA 472


>gi|307107456|gb|EFN55699.1| hypothetical protein CHLNCDRAFT_133982 [Chlorella variabilis]
          Length = 753

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 48/150 (32%), Gaps = 10/150 (6%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            +Y+       D  +   F      S     +  +   D      L       +   R+ 
Sbjct: 497 AVYKGHQLPVWDVATCPYFSPFYFASCGADRTARLWSTDRVQPLRLFVGHTSDVDVVRWH 556

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           PN   +A  + D      V L D R  +  + +   +  I A  FS +G         D 
Sbjct: 557 PNCHYIATGSADR----TVRLWDVRTGQCCRLLVGHKDKISALAFSPDGTTLA---TADA 609

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYS 310
           +  +   DL +   +RLT T   +    +S
Sbjct: 610 SGTLIVWDLAT--AKRLT-TAHEHRGPVWS 636



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 71/209 (33%), Gaps = 25/209 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PR 264
                  +F   FSP+ Q +  A+ D    +R++ M+ R + A  +        +A  P 
Sbjct: 457 FAGHSGPVFGLDFSPDNQLLFSASGD--GSVRLWSMEVRANLAVYKGHQLPVWDVATCPY 514

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES-DR 322
           FS        S   D    ++S D       RL      ++    + P+   I   S DR
Sbjct: 515 FSP---FYFASCGADRTARLWSTDRV--QPLRLFVGHTSDVDVVRWHPNCHYIATGSADR 569

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                + +         R+    +       +SP G  +A    SG      ++  D + 
Sbjct: 570 T----VRLWDVRTGQCCRLLVGHKDKISALAFSPDGTTLATADASGT-----LIVWDLAT 620

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            + L      + P WS     L +S+ + 
Sbjct: 621 AKRLTTAHEHRGPVWS-----LAYSQGEG 644


>gi|193215005|ref|YP_001996204.1| WD40 domain-containing protein [Chloroherpeton thalassium ATCC
           35110]
 gi|193088482|gb|ACF13757.1| WD-40 repeat protein [Chloroherpeton thalassium ATCC 35110]
          Length = 671

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 66/226 (29%), Gaps = 16/226 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +TPS  + ++   +S + + +            + L +T   R    +   +  +     
Sbjct: 47  ITPSMTEYIYTIAYSRDGKTLI----SAGSTKDIRLWNTGSGRESGLLTGHKLAVNKVVV 102

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESDR 322
           S NGK    S   D  + ++     +     L             ++S DS    F    
Sbjct: 103 SPNGKLLA-SASNDGTVRLW----DTQTWRALHTLKGHEQEINAVAFSSDSR---FVVSG 154

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              + + V  +   +                +SP  D +  +     +  I  M+     
Sbjct: 155 STDKMVLVWNALSGELIHSFVGHTRLVAAVAFSPD-DRLVVSSGWDSQINIWSMETGNGI 213

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             L    + +    + P    L+          S +   D++ R E
Sbjct: 214 GSLTGHPNGIHKLCFLPRTGELLSVSYDRFRKSSNVKLWDISARKE 259



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 53/156 (33%), Gaps = 14/156 (8%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTN--TLFINISASY 309
           G   S + A  FS +     ++        I   D+ +    R  +T   T +I   A Y
Sbjct: 7   GQSSSKVNAFAFSPDHSFLAVA-----NWKIIITDILTGKEFRSLITPSMTEYIYTIA-Y 60

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S D   ++        + + +  +    +  +    + +    V SP G L+A     G 
Sbjct: 61  SRDGKTLI---SAGSTKDIRLWNTGSGRESGLLTGHKLAVNKVVVSPNGKLLASASNDGT 117

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              +   +   +   L   +  + A  +S   R ++
Sbjct: 118 V-RLWDTQTWRALHTLKGHEQEINAVAFSSDSRFVV 152



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 82/238 (34%), Gaps = 24/238 (10%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRY--LTPSRDQILFEPRFSPNQQKVAYATYDD 233
            + F S+  +       L +MD +  + +Y  +   +   ++   F+P      +A    
Sbjct: 362 SLAFSSDGSLLASASWKLSLMDVESGDTKYNLIEFVKTGYIYALAFNPKGN--LFAAAGT 419

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +  +R++  +T       +I     +I +  F  NG             D +     +  
Sbjct: 420 DKFIRIF--ETSSGNEKGQIEGHNQVINSLAFHPNGYLLA-----SGGNDGWVKTWDTRK 472

Query: 294 TERL-TNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-DKEASY 349
              + +     +   S ++S D   +       G +++ V+ + G+ +K+ +        
Sbjct: 473 ESEIDSFHEHEDAVTSVAFSSDGRFLA----SAGNDKIAVLWNAGTGKKKHTLVGHSRPV 528

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLI 405
               +SP    +A   +      I +   +   E +        +    +SP+G+ +I
Sbjct: 529 TCVAFSPNAKFLATGSWDRS---IKLWNLETGLEEICLAGHPVGIDFIAFSPNGKMMI 583



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/192 (11%), Positives = 56/192 (29%), Gaps = 14/192 (7%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               + + +    N +      +Q++    F PN     Y      +   V   DTR + 
Sbjct: 419 TDKFIRIFETSSGNEKGQIEGHNQVINSLAFHPNG----YLLASGGNDGWVKTWDTRKES 474

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATER-LTNTLFINIS 306
                      + +  FSS+G+    +        I  + +  +   +  L         
Sbjct: 475 EIDSFHEHEDAVTSVAFSSDGRFLASA----GNDKIAVLWNAGTGKKKHTLVGHSRPVTC 530

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++SP++    F +       + +       ++              +SP G ++     
Sbjct: 531 VAFSPNAK---FLATGSWDRSIKLWNLETGLEEICLAGHPVGIDFIAFSPNGKMMI-ASG 586

Query: 367 SGEKFAIGVMKK 378
                 + +M+ 
Sbjct: 587 YNRVRKLSIMRL 598


>gi|73668993|ref|YP_305008.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
 gi|72396155|gb|AAZ70428.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
          Length = 685

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 84/259 (32%), Gaps = 34/259 (13%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R +        F P  S     + +       I  +   +T ID        F   I+
Sbjct: 140 NNRPVPYDYLGYSFGPYIS--GNTIMWGGPHGYYIYDISTQETHIDNMSAPYPVFFGNIV 197

Query: 262 APRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPD--SSQIVF 318
              +  +          D       + DL ++   ++TN        +++PD     IV+
Sbjct: 198 --VWVPD---------IDGRPSNLIMYDLSTHKETQITNNDS-----AFNPDIYGDIIVW 241

Query: 319 ESDREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKF 371
              R+  +     ++Y+   +   + +I+           +SP+   D I +        
Sbjct: 242 ADWRQRDDGYQYSEIYMYDLSTKKETQITNSGSTHGSAHYYSPRISEDRIIWLDTRDSG- 300

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +I +      +E      S  Q   ++  G  +++S  K+      +Y   L   N  + 
Sbjct: 301 SIYMYNISTQEETQTNNTSIRQRQGFTFYGDKIVWSDWKNEK--PNVYMGTLTSSNLPIA 358

Query: 432 N---TPAYASDPQWVGFMD 447
           +   +P     P  V F D
Sbjct: 359 SFSASPTSGKAPMKVQFTD 377



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 16/106 (15%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           ++  I+    A+      S  GD I +            F I +      +E  +    +
Sbjct: 41  NETPITTSGSAT----SPSIYGDRIVWKDWRNGNRDDGPFNIYMYNISTQKETQITTGGS 96

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTG-----SKLYSIDLNGRNETLIN 432
              P+    G  +++   ++G+         +Y  DL+   ET IN
Sbjct: 97  ACCPSI--YGDRIVWKEWRNGNQNDTEEEYDVYMYDLSTHKETRIN 140


>gi|310794667|gb|EFQ30128.1| WD domain-containing protein [Glomerella graminicola M1.001]
          Length = 844

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 65/202 (32%), Gaps = 18/202 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +  A A+    D L V ++DT+ +   + + +         F   G    ++  
Sbjct: 105 ALSPDAKWCAVAS----DELTVKVVDTQDNSRVRVLKDHGRPTKHLAFDPRGGLLALACT 160

Query: 278 KDEAMDIYSVDLQSNATERLTNT------LFINISAS--YSPDSSQIVFESDREGKEQLY 329
            D  + +YS+   +    R  +            SA   + PD     F       +   
Sbjct: 161 -DGVIYVYSMTADTPELIRKVDGVIGPLESDSETSARIVWHPDGR--AFAVPTPMHDVQV 217

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V +++   Q+  +           WSP G L+A     G    + + +          + 
Sbjct: 218 VSKNDWEKQRAFANGHLGDITALAWSPNGALLATAAKDG---KLLIWETKTQSVVQKFDY 274

Query: 390 SNLQAPTWSPSGRSLIFSRKKD 411
            N+    W P    L F+    
Sbjct: 275 RNVLDLAWHPKDNLLSFTTSDG 296


>gi|293335541|ref|NP_001169229.1| hypothetical protein LOC100383087 [Zea mays]
 gi|223975693|gb|ACN32034.1| unknown [Zea mays]
          Length = 234

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 66/205 (32%), Gaps = 14/205 (6%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           T  D+   +        +  + F++ +  SG+    +           +     +  +  
Sbjct: 16  TYDDNAITNAVEIFNTSSGAVHFMASNNDSGVRYYDMERFQL------FKHFQFEWPVNH 69

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              SP+++ V        D     L+D    +    I   R    A  +S +G+    + 
Sbjct: 70  ASLSPDRKVVVIV----GDDPDGLLIDANSGKTVHSIKGHRDYSFASAWSPDGRTFA-TG 124

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D+   I+ V   S +   L   L    S  ++ D     F S  E  + +++      
Sbjct: 125 NQDKTCRIWDVRNLSKSVHVLRGNLGAIRSIRFTSDGQ---FMSMAEPADFVHIYDVKSD 181

Query: 337 DQKRISQDKEASYFDPVWSPQGDLI 361
             KR   D         +SP  D +
Sbjct: 182 YNKRQELDFFGEISGTSFSPDTDTL 206



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/138 (13%), Positives = 53/138 (38%), Gaps = 7/138 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDR 322
             S + K  +I     +  D   +D  S  T   +      + ++++SPD        ++
Sbjct: 71  SLSPDRKVVVIV---GDDPDGLLIDANSGKTVHSIKGHRDYSFASAWSPDGRTFA-TGNQ 126

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +   +++ ++ N S    + +    +     ++  G  ++  + +     I  +K D ++
Sbjct: 127 DKTCRIWDVR-NLSKSVHVLRGNLGAIRSIRFTSDGQFMSMAEPAD-FVHIYDVKSDYNK 184

Query: 383 ERLLVEDSNLQAPTWSPS 400
            + L     +   ++SP 
Sbjct: 185 RQELDFFGEISGTSFSPD 202



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 38/132 (28%), Gaps = 6/132 (4%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           AS SPD   +V   D        ++ +N        +      F   WSP G   A    
Sbjct: 70  ASLSPDRKVVVIVGD---DPDGLLIDANSGKTVHSIKGHRDYSFASAWSPDGRTFATGNQ 126

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                   V     S   L      +++  ++  G+   F    +      +Y +  +  
Sbjct: 127 DKTCRIWDVRNLSKSVHVLRGNLGAIRSIRFTSDGQ---FMSMAEPADFVHIYDVKSDYN 183

Query: 427 NETLINTPAYAS 438
               ++     S
Sbjct: 184 KRQELDFFGEIS 195


>gi|124266141|ref|YP_001020145.1| WD repeat-containing protein [Methylibium petroleiphilum PM1]
 gi|124258916|gb|ABM93910.1| WD-repeat family protein [Methylibium petroleiphilum PM1]
          Length = 340

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 82/230 (35%), Gaps = 32/230 (13%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPR------FSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           V+   G  +  L       +  P       F P+ + +  A           +       
Sbjct: 100 VVYAGGKRVARLRHGGTDEIELPASATAIAFCPDGRTLGVAHSGG-------VTLWHEAA 152

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            P+R+  +     A  +S +G+  +++  ++ A+  + V       E +       +S +
Sbjct: 153 LPRRLA-WPGYHRAIAWSPDGRY-VVTGMQENALHGWRVQ-DGGDME-MAGYPGQPLSLA 208

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS----PQGDLIAFT 364
           ++PD +Q+       G  +            +  ++       PV S    P+  +IA  
Sbjct: 209 FTPDGTQLA----TSGALRPVCWDFARPGASQAPRECGIQSKAPVTSVACHPRYPVIAAG 264

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKD 411
             SG   A+ + +  GS   LL++ +   AP+   WSP G  L F  +  
Sbjct: 265 YHSG---AVTLCQP-GSDSFLLLKGAGGGAPSALAWSPDGERLAFGTQDG 310



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 51/163 (31%), Gaps = 11/163 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + V   T   E+ L  + +    D     +  +    L+  F+ +G +   S  
Sbjct: 167 AWSPDGRYV--VTGMQENALHGWRVQDGGDME---MAGYPGQPLSLAFTPDGTQLATSGA 221

Query: 278 KDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                  ++    S A       +     S +  P     V  +          +   GS
Sbjct: 222 LRPVCWDFARPGASQAPRECGIQSKAPVTSVACHP--RYPVIAA--GYHSGAVTLCQPGS 277

Query: 337 DQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           D   + +     +     WSP G+ +AF    G    I +   
Sbjct: 278 DSFLLLKGAGGGAPSALAWSPDGERLAFGTQDGWLGWIELPDP 320


>gi|18858099|ref|NP_572572.1| CG3004 [Drosophila melanogaster]
 gi|75027899|sp|Q9W328|LST8_DROME RecName: Full=Protein LST8 homolog
 gi|16769280|gb|AAL28859.1| LD23129p [Drosophila melanogaster]
 gi|22832012|gb|AAF46509.2| CG3004 [Drosophila melanogaster]
 gi|194353344|emb|CAQ53464.1| CG3004-PA [Drosophila melanogaster]
 gi|194353346|emb|CAQ53465.1| CG3004-PA [Drosophila melanogaster]
 gi|194353348|emb|CAQ53466.1| CG3004-PA [Drosophila melanogaster]
 gi|194353350|emb|CAQ53467.1| CG3004-PA [Drosophila melanogaster]
 gi|194353352|emb|CAQ53468.1| CG3004-PA [Drosophila melanogaster]
 gi|194353354|emb|CAQ53469.1| CG3004-PA [Drosophila melanogaster]
 gi|194353356|emb|CAQ53470.1| CG3004-PA [Drosophila melanogaster]
 gi|194353358|emb|CAQ53471.1| CG3004-PA [Drosophila melanogaster]
 gi|194353360|emb|CAQ53472.1| CG3004-PA [Drosophila melanogaster]
 gi|194353362|emb|CAQ53473.1| CG3004-PA [Drosophila melanogaster]
 gi|220945712|gb|ACL85399.1| CG3004-PA [synthetic construct]
 gi|223968829|emb|CAR94145.1| CG3004-PA [Drosophila melanogaster]
 gi|223968831|emb|CAR94146.1| CG3004-PA [Drosophila melanogaster]
 gi|223968833|emb|CAR94147.1| CG3004-PA [Drosophila melanogaster]
 gi|223968835|emb|CAR94148.1| CG3004-PA [Drosophila melanogaster]
 gi|223968837|emb|CAR94149.1| CG3004-PA [Drosophila melanogaster]
 gi|223968839|emb|CAR94150.1| CG3004-PA [Drosophila melanogaster]
 gi|223968841|emb|CAR94151.1| CG3004-PA [Drosophila melanogaster]
 gi|223968843|emb|CAR94152.1| CG3004-PA [Drosophila melanogaster]
 gi|223968845|emb|CAR94153.1| CG3004-PA [Drosophila melanogaster]
 gi|223968847|emb|CAR94154.1| CG3004-PA [Drosophila melanogaster]
 gi|223968849|emb|CAR94155.1| CG3004-PA [Drosophila melanogaster]
          Length = 313

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 66/188 (35%), Gaps = 19/188 (10%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G     +  +D  + I+ +        R+ +      +A   P+  +I   S       
Sbjct: 91  DGNWM-FTAGEDHHVRIWDMIAAPPHCSRIFDCEAPVNAACLHPNQVEIAMGSQ---NGS 146

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD------GS 381
           +++        +RI  + +AS  D   SP G  +A     G  +   +  +D        
Sbjct: 147 VFLWDVKSERHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSQDQKMSTLRP 206

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPA 435
             ++      +    +SP  R L+ +    GD    ++  D   +   L      +   A
Sbjct: 207 NRKIPAHSRYILRCKFSPDSRLLLTTS---GDGTVCIWKTDDFSKWRELCIENYWVWDAA 263

Query: 436 YASDPQWV 443
           +++D +W+
Sbjct: 264 FSADSKWL 271



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 64/155 (41%), Gaps = 10/155 (6%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    S+ + D        + P  D  + +   SP+ + +A    +++    ++ + ++ 
Sbjct: 141 GSQNGSVFLWDVKSERHERIVPEVDASIQDVAISPDGRYLA--AANNKGNCYIWSLTSQD 198

Query: 247 DRAP-----KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +       ++I      IL  +FS +  R L++   D  + I+  D   +    L    
Sbjct: 199 QKMSTLRPNRKIPAHSRYILRCKFSPD-SRLLLTTSGDGTVCIWKTD-DFSKWRELCIEN 256

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +    A++S DS  + F +  +G  +L+ +Q+  S
Sbjct: 257 YWVWDAAFSADSKWL-FTASSDGIARLWKLQTKSS 290



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 15/168 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            PNQ ++A           V+L D + +R  + +    + I     S +G+    +    
Sbjct: 132 HPNQVEIA----MGSQNGSVFLWDVKSERHERIVPEVDASIQDVAISPDGRYLA-AANNK 186

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISAS------YSPDSSQIVFESDREGKEQLYVMQS 333
               I+S+  Q      L     I   +       +SPDS  ++  S   G   + + ++
Sbjct: 187 GNCYIWSLTSQDQKMSTLRPNRKIPAHSRYILRCKFSPDSRLLLTTS---GDGTVCIWKT 243

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           +   + R    +    +D  +S     + FT  S     +  ++   S
Sbjct: 244 DDFSKWRELCIENYWVWDAAFSADSKWL-FTASSDGIARLWKLQTKSS 290


>gi|74220999|dbj|BAE33664.1| unnamed protein product [Mus musculus]
          Length = 639

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 76/257 (29%), Gaps = 55/257 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + + D   I  +       +   +++P+   +A  + D    LR++    +       
Sbjct: 73  VILRNIDNPAIADIYTEHAHQVVVAKYAPSGFYIA--SGDISGKLRIWDTTQKEHLLKYE 130

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK--------------------DEAMDIYSVDLQSN 292
              F   I    ++ + KR  +  +                          I SVD++  
Sbjct: 131 YQPFAGKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDTGSSVGEITGHNKVINSVDIKQT 190

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RL      N +A +             EG    +              D        
Sbjct: 191 RPYRLATGSDDNCAAFF-------------EGPPFKFKFTIG---------DHSRFVNCV 228

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFS 407
            +SP G+  A     G    I +      ++          D  + A +WSP    L+  
Sbjct: 229 RFSPDGNRFATASADG---QIFIYDGKTGEKVCALGESKAHDGGIYAISWSPDSTHLL-- 283

Query: 408 RKKDGDTGSKLYSIDLN 424
               GD  SK++ +++N
Sbjct: 284 -SASGDKTSKIWDVNVN 299


>gi|290955497|ref|YP_003486679.1| hypothetical protein SCAB_9291 [Streptomyces scabiei 87.22]
 gi|260645023|emb|CBG68109.1| putative secreted protein [Streptomyces scabiei 87.22]
          Length = 431

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 50/356 (14%), Positives = 97/356 (27%), Gaps = 55/356 (15%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           L  G           +    +DV   +   G                ++D  Y ++    
Sbjct: 94  LYIGTYTSAEGGGTGIGVATYDVPSGRITGGGTITG-----------VADPSYLAVHP-- 140

Query: 171 GDFNSRILF-VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
              + R L+ V+E    G+    L      G        S  +        P  + +  A
Sbjct: 141 ---DGRTLYAVNERTRGGVTAVRLADRRVLGTR-----SSGGEAPCHLSVHPGGRWLLNA 192

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR----------FSSNGKRALISVQKD 279
            Y    +    + D+        +   RS    P            S +G   L      
Sbjct: 193 DYGSGSVAVHPVEDSGALGERTDLVVHRSPAPGPGQDGPHAHQIITSPDGGHVLAVDLGT 252

Query: 280 EAMDIYSVDLQSNATERL----TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + +  Y +D        +    T         ++ P        ++ +    +       
Sbjct: 253 DTVYTYRLDESRGTLTEVSRAGTRPGAGPRHLTFHPGGRYAYLANELDNTVVVCAYDPGS 312

Query: 336 SDQKRISQDKEASYFDPV---------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
               R++     S               +P G          +      ++ DG++ RLL
Sbjct: 313 G---RLTPGDPQSTGTGAGTNYPAQLVVTPDGSYAYLANRGHDSLTRYAVEADGARLRLL 369

Query: 387 ----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
               V  +  +    SP G  L+F+  +     S ++ ++  G  E      A+AS
Sbjct: 370 DTVPVGGAFPRQIALSPDGG-LLFAALQRSSAVS-VFRVEA-GSGELRRAGGAFAS 422


>gi|255948634|ref|XP_002565084.1| Pc22g11370 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592101|emb|CAP98425.1| Pc22g11370 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 838

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 68/209 (32%), Gaps = 23/209 (11%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + VA A+    D L V ++        K +           F  +G+ A +S   D  
Sbjct: 108 DGEWVAVAS----DELTVKIVKVDDMTQVKYLREQSKGTKHVTFDPSGRYATVSGT-DGI 162

Query: 282 MDIYSVDLQ--------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           + IYS+  +             RL         A + PD +   F S    ++      S
Sbjct: 163 LYIYSMHEEEPELVRKLDGVIRRLEPDAEATSRAVWHPDGT--AFASAEATRDISIYSTS 220

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
               +K  +           W+P G L+A     G    I + +          +  N+ 
Sbjct: 221 EWKKEKTFAGGHTGDITALSWAPNGSLLASAASDG---YIVLWEAKTQNILQRYDFGNVM 277

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +W P+  SL F+         +L+  D
Sbjct: 278 NLSWHPTKNSLSFTTSDG-----ELFIYD 301


>gi|88601657|ref|YP_501835.1| peptidase S9B, dipeptidylpeptidase IV-like protein
           [Methanospirillum hungatei JF-1]
 gi|88187119|gb|ABD40116.1| peptidase S9B, dipeptidylpeptidase IV-like protein
           [Methanospirillum hungatei JF-1]
          Length = 764

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 56/144 (38%), Gaps = 17/144 (11%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYS--------PDSSQIVFESD 321
           L   + ++ + + + D ++     +   T T +I  S  Y+         +   I F S+
Sbjct: 322 LFVERGEKTLRLLAGDARTGTVREILNETGTSYIESSLEYAGTPNIHVLANGDIIWF-SE 380

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-----FAIGVM 376
           R+G   LY   +NG+ +K+I++             +   I FT    E+       +  +
Sbjct: 381 RDGWGHLYRYDANGTLKKQITKGPWVVREILAVDEKNGHIYFTASGKEEGNPYYHYLYRV 440

Query: 377 KKDGSQERLLVEDSNLQAPTWSPS 400
           + DG+  RLL       +   SP 
Sbjct: 441 QTDGNDLRLLTPGQADHSVFLSPD 464



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 64/161 (39%), Gaps = 16/161 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESD--REG 324
           NG     S ++D    +Y  D      +++T   ++     +    +  I F +    EG
Sbjct: 372 NGDIIWFS-ERDGWGHLYRYDANGTLKKQITKGPWVVREILAVDEKNGHIYFTASGKEEG 430

Query: 325 KE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-GDLI-AFTKFS-GEKFAIGVMKK 378
                 LY +Q++G+D + ++  +  +      SP     I A+++        +  M  
Sbjct: 431 NPYYHYLYRVQTDGNDLRLLTPGQ--ADHSVFLSPDLTCFIDAYSRADLPTVTVLRSMDG 488

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                    +DS+LQ   WSP+ R  + +R    D  ++LY
Sbjct: 489 TLLMHLATADDSDLQRNGWSPAERFTVTAR----DGKTELY 525


>gi|296132089|ref|YP_003639336.1| hypothetical protein TherJR_0558 [Thermincola sp. JR]
 gi|296030667|gb|ADG81435.1| hypothetical protein TherJR_0558 [Thermincola potens JR]
          Length = 226

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 71/206 (34%), Gaps = 33/206 (16%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRF 265
             ++         S +  ++           ++ L+D   ++  K + ++     L    
Sbjct: 26  FQNKSDTYVLATISNDSNQI-------HQQRKIVLLDLNKNKIIKELYSYNEGHTLEAAV 78

Query: 266 SSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISA-SY-SPDSSQIVFESDR 322
           S + ++  ++       ++++++DL +    +LTN +   I   S+ + D     F S  
Sbjct: 79  SPDKRKLAVNKWTNHMDLNLFTIDLNTGKEFQLTNNINGEIERISWINNDEILYTFTSHN 138

Query: 323 EGKEQ----LYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDLIAFTKFSGEKF--- 371
             K+     +YV+ +    ++ I   +       Y    + PQ   I   +   + F   
Sbjct: 139 PKKDGLGTLIYVINTKTGRRRLIDGIEGLKAIYWYNTVKYIPQIKKIVMVRGLADDFFKP 198

Query: 372 -----------AIGVMKKDGSQERLL 386
                       + +   +G  ++ L
Sbjct: 199 AINDTIHAPRNQLYLCDINGKNQKKL 224


>gi|258570725|ref|XP_002544166.1| dipeptidyl-peptidase 5 [Uncinocarpus reesii 1704]
 gi|237904436|gb|EEP78837.1| dipeptidyl-peptidase 5 [Uncinocarpus reesii 1704]
          Length = 723

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 49/138 (35%), Gaps = 30/138 (21%)

Query: 310 SPDSSQIVFESD------------------REGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           SPD   + F S                    +G  +   + S   D     +    +   
Sbjct: 236 SPDGETVAFMSKAPELPKANLTTSYIFVGPHDGSSRFTPINSRDGDATP--EGVRGASTS 293

Query: 352 PVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAP---TWSPSGRS 403
           PV+SP    +A+ +  GE +      I V     S     V +   ++P    WSP+GRS
Sbjct: 294 PVFSPDSKELAYLQMHGENYESDRNIIYVATVGRSPRIRAVAEDWDRSPGSIKWSPNGRS 353

Query: 404 LIFSRKKDGDTGSKLYSI 421
           L  +    G    +L+S+
Sbjct: 354 LYVTADDRGTG--RLFSV 369



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 43/113 (38%), Gaps = 14/113 (12%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFE---------PRFSPNQQKVAYATYDDEDIL--RV 239
           + + V   DG++      SRD              P FSP+ +++AY     E+    R 
Sbjct: 259 SYIFVGPHDGSSRFTPINSRDGDATPEGVRGASTSPVFSPDSKELAYLQMHGENYESDRN 318

Query: 240 YLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDL 289
            +    + R+P+          +P   ++S NG+   ++        ++SV  
Sbjct: 319 IIYVATVGRSPRIRAVAEDWDRSPGSIKWSPNGRSLYVTADDRGTGRLFSVPA 371



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 43/137 (31%), Gaps = 22/137 (16%)

Query: 219 FSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPK-----------RIGNFRSMILAP 263
            SP+ + VA+ +   E    ++   Y+     D + +                R    +P
Sbjct: 235 ISPDGETVAFMSKAPELPKANLTTSYIFVGPHDGSSRFTPINSRDGDATPEGVRGASTSP 294

Query: 264 RFSSNGKRALISVQKDEAM----DIYSVDLQSNATERLTNTLFINISA---SYSPDSSQI 316
            FS + K         E      +I  V     +          + S     +SP+   +
Sbjct: 295 VFSPDSKELAYLQMHGENYESDRNIIYVATVGRSPRIRAVAEDWDRSPGSIKWSPNGRSL 354

Query: 317 VFESDREGKEQLYVMQS 333
              +D  G  +L+ + +
Sbjct: 355 YVTADDRGTGRLFSVPA 371



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 29/139 (20%)

Query: 266 SSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFIN----------ISAS 308
           S +G+      +  E          I+      ++     N+   +           S  
Sbjct: 236 SPDGETVAFMSKAPELPKANLTTSYIFVGPHDGSSRFTPINSRDGDATPEGVRGASTSPV 295

Query: 309 YSPDSSQIVF--------ESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGD 359
           +SPDS ++ +        ESDR     +YV     S + R +++D + S     WSP G 
Sbjct: 296 FSPDSKELAYLQMHGENYESDR---NIIYVATVGRSPRIRAVAEDWDRSPGSIKWSPNGR 352

Query: 360 LIAFTKFSGEKFAIGVMKK 378
            +  T        +  +  
Sbjct: 353 SLYVTADDRGTGRLFSVPA 371



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 34/126 (26%), Gaps = 24/126 (19%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVEDSNLQ-- 393
                       SP G+ +AF   + E          I V   DGS     +   +    
Sbjct: 224 YPPFGGSEHYDISPDGETVAFMSKAPELPKANLTTSYIFVGPHDGSSRFTPINSRDGDAT 283

Query: 394 ---------APTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDP- 440
                    +P +SP  + L + +    +  S    +Y   +            +   P 
Sbjct: 284 PEGVRGASTSPVFSPDSKELAYLQMHGENYESDRNIIYVATVGRSPRIRAVAEDWDRSPG 343

Query: 441 --QWVG 444
             +W  
Sbjct: 344 SIKWSP 349


>gi|189209211|ref|XP_001940938.1| dipeptidyl-peptidase V precursor [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187977031|gb|EDU43657.1| dipeptidyl-peptidase V precursor [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 671

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 51/143 (35%), Gaps = 24/143 (16%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMK 377
           K  L+ M    +  +   Q   +   D   +P G ++AF   S +          I V+ 
Sbjct: 212 KNLLWGMNYTITRPESPVQGSSSDPGDYDLAPDGSMVAFRTKSPDLPKANYTASYIYVVP 271

Query: 378 KDGSQERLL----------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGS---KLYSIDLN 424
            DGS   +                  AP WS     + ++++   D  S   KLY  D++
Sbjct: 272 FDGSAVAVPINGPETTAPQTAQGASGAPVWSHDSSKVAYTQQDGIDYESDKYKLYVADMD 331

Query: 425 GRNETLINTP-AYASDP---QWV 443
           G N  + +    + S P   +W 
Sbjct: 332 GMNSQVRSVAEDWDSSPTGLKWS 354



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 53/171 (30%), Gaps = 22/171 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---------ATYDDEDI 236
           +G +KN L  M+                  +   +P+   VA+         A Y    I
Sbjct: 208 AGELKNLLWGMNYTITRPESPVQGSSSDPGDYDLAPDGSMVAFRTKSPDLPKANYTASYI 267

Query: 237 LRVYLMDTRI-----DRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-----EAMDIYS 286
             V    + +               +    AP +S +  +   + Q       +   +Y 
Sbjct: 268 YVVPFDGSAVAVPINGPETTAPQTAQGASGAPVWSHDSSKVAYTQQDGIDYESDKYKLYV 327

Query: 287 VDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSN 334
            D+    ++  +     + S +   +S D + +   S+     +L+ +  +
Sbjct: 328 ADMDGMNSQVRSVAEDWDSSPTGLKWSSDDANLWVTSELHASVRLWAVPQD 378


>gi|159130217|gb|EDP55330.1| conserved hypothetical protein [Aspergillus fumigatus A1163]
          Length = 621

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 53/151 (35%), Gaps = 10/151 (6%)

Query: 265 FSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           FS +G   L      E   +D+++V L + A  RLT+        ++S D    V    R
Sbjct: 278 FSGSGDEILYIGSPREANNIDVFAVHLVTGAVRRLTSHPEYTDPVAFSRDDKWFVAMDTR 337

Query: 323 EGKEQLY----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
               Q++     M     D   ++         P    Q  LI      G+ F   V   
Sbjct: 338 GSDRQMWMSGMRMVPPLIDLVTVTAASSTRNNGPRRFFQPILIDRHGDRGDYFGQQV-NA 396

Query: 379 DGSQERLLVEDSNLQA---PTWSPSGRSLIF 406
           +G      V D N      P++SP    ++F
Sbjct: 397 EGDGSNGSVNDPNWNGRADPSFSPDSTRIVF 427


>gi|168705419|ref|ZP_02737696.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 316

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 74/207 (35%), Gaps = 9/207 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SV 276
            FSP++  +A A  D     RV+ +          +     +  +  F+ N +   + S 
Sbjct: 25  AFSPDRCLLASAAAD--GTARVWNVSGSKVGERSVLRKAGDLFHSLAFAPNSRTLAVGSG 82

Query: 277 QKDEAMDIY-SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +  + +Y   D  +     L           +S D  Q+   +  +   +++  ++  
Sbjct: 83  ALNGMVWLYDVTDPIAVEAGVLRGARGAVDGLCFSADGKQVA-GAGADRTVRVWEPRAGA 141

Query: 336 S-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           S D + +      +     ++P G  +A     G      V +   ++  +L   S + A
Sbjct: 142 SADPRAMLVGHAHAVKAVAFTPDGTGLATAACDGSVRVWSVGRIRSTERAVLSHPSEVNA 201

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +S  G++L    +   D   +L+ +
Sbjct: 202 VAYSADGKTLATGAQ---DGVIRLWDV 225



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 67/187 (35%), Gaps = 7/187 (3%)

Query: 186 SGIIKNSLCVMDRDGA--NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           S     +  V +  G+    R +      +     F+PN + +A  +     ++ +Y + 
Sbjct: 35  SAAADGTARVWNVSGSKVGERSVLRKAGDLFHSLAFAPNSRTLAVGSGALNGMVWLYDVT 94

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRAL-ISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             I      +   R  +    FS++GK+       +   +        ++    L     
Sbjct: 95  DPIAVEAGVLRGARGAVDGLCFSADGKQVAGAGADRTVRVWEPRAGASADPRAMLVGHAH 154

Query: 303 INISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              + +++PD + +   +  +G  +++ V +   +++  +S   E +     +S  G  +
Sbjct: 155 AVKAVAFTPDGTGLA-TAACDGSVRVWSVGRIRSTERAVLSHPSEVN--AVAYSADGKTL 211

Query: 362 AFTKFSG 368
           A     G
Sbjct: 212 ATGAQDG 218


>gi|168701367|ref|ZP_02733644.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 1115

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 52/272 (19%), Positives = 84/272 (30%), Gaps = 44/272 (16%)

Query: 190 KNSLCVMDRDGANIRYLTPSR-----------DQILFEPR-------FSPNQQKVAYATY 231
              L V+D DG     +   +           +  LF PR       FSP+ +  A    
Sbjct: 375 DKRLLVLDADGFRSFDVGTGKPERTNVLRRRTEPNLFPPREETIGAGFSPDAKVYAVVRG 434

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRALISVQKDEAMDIYSVD 288
             E +L             K +    +M  A     F+ NG    + +       +   D
Sbjct: 435 SGEMVLGNTATGEVTRTIAKAMTIPENMGYAHVNVLFTPNGTGVCVPI---LNAAVPIFD 491

Query: 289 LQSNA-----TERLTNTLFINISASYSPDSSQIVFES------DREGKE-QLYVMQSNGS 336
            Q+        + L +      SA+++ D    V ++      +R      + V      
Sbjct: 492 TQTGESKHSLAKELVSQSNTIYSAAFAADGRTFVADTLARAEGERVAAPYAIAVGDVATG 551

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL---LVEDSNLQ 393
              R     E      V SP G L+A    S     I V+     +E     L     L 
Sbjct: 552 KVVRTIPLPEMPRVLSV-SPNGKLVAVGTQSSGPSQIRVLDLASGKEVQSVPLTLTPAL- 609

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             T+SP  R L  +   +G     ++ +  NG
Sbjct: 610 -VTFSPDSRLLAGTCHYEGKVT--VWDLGKNG 638



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 85/264 (32%), Gaps = 34/264 (12%)

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
           K G  +LR E         K    +      ++  + A  +     + +T    DF  R+
Sbjct: 695 KSGDGKLRAEIEF---PKGKPQQSRAILVKESATDRTAARL-----EGLT----DFPRRM 742

Query: 178 LFVSESV--VSGIIKNSLCVMDRDG----ANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           +F   +   V+    + L V D        + +Y   +          S    +     +
Sbjct: 743 VFADGNRLLVTATQDDVLTVWDVGAKKSLWSEKYPARAFGYSGMGEPHSDAANRRMAIAW 802

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQ 290
             ++   + + + R      R+    +++ A   FS +G         ++A+ ++ V   
Sbjct: 803 RGQNATVIDVWELRRPTRVSRVEVPNALLAAGIAFSPDG---AYIAGGNDAVTLWRVS-D 858

Query: 291 SNATERLTNTLFINI-------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
               + L               S ++SPDS +++     +G   + + +       R + 
Sbjct: 859 GRKVQTLGGHAAKEARNDRPRISCAFSPDSGKLL---TVDGTGTIRLWECVSGQLIR-TF 914

Query: 344 DKEASYFDPVWSPQGDLIAFTKFS 367
                     +SP G LI    + 
Sbjct: 915 SGHHGPTSAHFSPDGRLIVGASYD 938



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 64/208 (30%), Gaps = 32/208 (15%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT-GEKGDFN 174
           V     D L V    WDV  +K +  +K+ +    +  +    SD   + +    +G   
Sbjct: 752 VTATQDDVLTV----WDVGAKKSLWSEKYPARAFGYSGMGEPHSDAANRRMAIAWRGQNA 807

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-----YA 229
           + I        + + +  +                   +     FSP+   +A       
Sbjct: 808 TVIDVWELRRPTRVSRVEV---------------PNALLAAGIAFSPDGAYIAGGNDAVT 852

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            +   D  +V    T    A K   N R  I    FS +  +    +  D    I   + 
Sbjct: 853 LWRVSDGRKV---QTLGGHAAKEARNDRPRISC-AFSPDSGKL---LTVDGTGTIRLWEC 905

Query: 290 QSNATERLTNTLFINISASYSPDSSQIV 317
            S    R  +      SA +SPD   IV
Sbjct: 906 VSGQLIRTFSGHHGPTSAHFSPDGRLIV 933



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 52/304 (17%), Positives = 100/304 (32%), Gaps = 98/304 (32%)

Query: 218 RFSPNQQKVAYATYDDED-ILRVYLMDTRIDRAPKRI------GNFRSMILAPRFSSNGK 270
            FS + +  A A+  + D  +RV+ M    ++    I         R+  ++  FS++ K
Sbjct: 317 AFSRDGRLFATASPANRDKSVRVWDMTDGKEKYRIPIAVNLDESAERARAVSVAFSADDK 376

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------------YSPDSSQIVF 318
           R L+ +  D      S D+ +   ER TN L      +            +SPD+   V+
Sbjct: 377 RLLV-LDADGFR---SFDVGTGKPER-TNVLRRRTEPNLFPPREETIGAGFSPDAK--VY 429

Query: 319 ESDREGKEQLYVMQSNGSDQKR-------ISQDKEASYFDPVWSPQGDLI---------- 361
              R G  ++ +  +   +  R       I ++   ++ + +++P G  +          
Sbjct: 430 AVVR-GSGEMVLGNTATGEVTRTIAKAMTIPENMGYAHVNVLFTPNGTGVCVPILNAAVP 488

Query: 362 AFTKFSGEK-------------------------------------------FAIGVMKK 378
            F   +GE                                            +AI V   
Sbjct: 489 IFDTQTGESKHSLAKELVSQSNTIYSAAFAADGRTFVADTLARAEGERVAAPYAIAVGDV 548

Query: 379 DGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE----TLI 431
              +    +     + P   + SP+G+ +    +  G   S++  +DL    E     L 
Sbjct: 549 ATGKVVRTI--PLPEMPRVLSVSPNGKLVAVGTQSSGP--SQIRVLDLASGKEVQSVPLT 604

Query: 432 NTPA 435
            TPA
Sbjct: 605 LTPA 608


>gi|149724681|ref|XP_001503992.1| PREDICTED: similar to Notchless protein homolog 1 [Equus caballus]
          Length = 484

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 61/178 (34%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 102 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCQGHRHW 157

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEA------SYFDPVWS 355
            +S S+SPD  ++       G    Q+ +   +   Q   +    +      S+     +
Sbjct: 158 VLSISWSPDGKKLA-----SGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHAN 212

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + V     G  ER+L     ++    W   G  L++S  +D
Sbjct: 213 PECRYVASSSKDGS---VRVWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 265



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 46/141 (32%), Gaps = 12/141 (8%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 339 GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASF---DKSI 395

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +     D   ++L  +
Sbjct: 396 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVW----DAKAQKLATD 450

Query: 389 DSNL----QAPTWSPSGRSLI 405
                    A  WSP G+ + 
Sbjct: 451 LPGHADEVYAVDWSPDGQRVA 471



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 130 SGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLA---SGCKNGQILLWDPST 186

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ ++           LT  
Sbjct: 187 GKQVGRTLAGHSKWITGLSWEPLHANPECRYVA-SSSKDGSVRVWDT-TAGRCERILTGH 244

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 245 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 297



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 301 RTGAFEPAEASINAQDLQGSLQELKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 357

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 358 AEDKKPLA----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 395

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 396 KLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDAKAQKLAT 449

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 450 DLPGHADEVYAVDWSPDGQRVA 471


>gi|260061280|ref|YP_003194360.1| OmpA family protein [Robiginitalea biformata HTCC2501]
 gi|88785412|gb|EAR16581.1| OmpA family protein [Robiginitalea biformata HTCC2501]
          Length = 832

 Score = 49.6 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 81/243 (33%), Gaps = 44/243 (18%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS--DDIYQSITGEKG 171
           GR  + G++RL  E  + ++ +R+   G +     + + +        D I  + + +  
Sbjct: 307 GRSGEAGQNRLLRETVMDNILNREAAYGIRNLDVNSKYSEFGPMFYQEDQIVFASSVDSA 366

Query: 172 DFNSRILFVSESVVSGIIKNSLCV--MDRDGANIRYLTPSRDQILFEP-----RFSPNQQ 224
            F++R         +      L V  ++ +G N+ +       +  +       FSP++Q
Sbjct: 367 FFHTR-----RYKWNNQPYLDLYVSRLNAEGDNLEHGVKFSKTLNTKYHEAGVAFSPDKQ 421

Query: 225 KVAYATYDDEDILRVYLMDTRIDR--APKRIGNFRS------------MILAPRFSSNGK 270
            V +   +    LR         +    +++G+  +                P  S +GK
Sbjct: 422 TVYFTRNNYGKRLRRDKNGVNHLKLYRSRKVGDEWTEAEELPFNGESYSTGHPALSPDGK 481

Query: 271 RALISVQKD---EAMDIYSVDLQS----NATERLTNTLFINI-----SASYSPDSSQIVF 318
           +              DI+ VD+      +    L     IN          +    ++ F
Sbjct: 482 QLYFVSDMPGTIGGTDIFVVDVLGDGTFSEPRNL--GPGINTPQKEMFPFIT--GRKLYF 537

Query: 319 ESD 321
            S+
Sbjct: 538 SSN 540



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 48/149 (32%), Gaps = 23/149 (15%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-------VQKDEAMDIYS-------VD 288
           +        +  N +       FS + +    +       +++D+    +        V 
Sbjct: 394 NLEHGVKFSKTLNTKYHEAGVAFSPDKQTVYFTRNNYGKRLRRDKNGVNHLKLYRSRKVG 453

Query: 289 LQSNATERLT-NTLFINIS-ASYSPDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQ 343
            +    E L  N    +    + SPD  Q+ F SD     G   ++V+   G      + 
Sbjct: 454 DEWTEAEELPFNGESYSTGHPALSPDGKQLYFVSDMPGTIGGTDIFVVDVLGDG----TF 509

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +  +    + +PQ ++  F       F+
Sbjct: 510 SEPRNLGPGINTPQKEMFPFITGRKLYFS 538



 Score = 40.8 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 40/120 (33%), Gaps = 20/120 (16%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEK-----------FAIGVMKKDGSQERLL---- 386
           + + +       +SP    + FT+ +  K             +   +K G +        
Sbjct: 404 TLNTKYHEAGVAFSPDKQTVYFTRNNYGKRLRRDKNGVNHLKLYRSRKVGDEWTEAEELP 463

Query: 387 --VEDSNLQAPTWSPSGRSLIFSRKKDGD-TGSKLYSIDL--NGRNETLINTPAYASDPQ 441
              E  +   P  SP G+ L F     G   G+ ++ +D+  +G      N     + PQ
Sbjct: 464 FNGESYSTGHPALSPDGKQLYFVSDMPGTIGGTDIFVVDVLGDGTFSEPRNLGPGINTPQ 523


>gi|302339390|ref|YP_003804596.1| hypothetical protein Spirs_2899 [Spirochaeta smaragdinae DSM 11293]
 gi|301636575|gb|ADK82002.1| conserved hypothetical protein [Spirochaeta smaragdinae DSM 11293]
          Length = 424

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 72/241 (29%), Gaps = 33/241 (13%)

Query: 190 KNSLCVMDRDGANIRYLTPS----RDQILFEPRF------SPNQQKVAYATYDDEDILRV 239
           +  L V       I          +  I     +      +P+  +V  + +  + +  +
Sbjct: 177 RRELWVSQMTTGKIHIFETGTYRFKQSISAGGSWPKVLITNPSHSRVYVSHWIGQSVAEI 236

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            +   R+ R     G  R M +    S +GK+  I+   D    I  VDL++     +  
Sbjct: 237 DVATRRVLRTFSVDGIPRGMAI----SPDGKKLYIANFSDGN--IAVVDLRTGEGHSIET 290

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQG 358
                          ++ F SD        V   +   ++ + + +   +       PQ 
Sbjct: 291 GPGAMRHLVIDTAGRRLYF-SDM---YHGSVGSIDTRTERLLWRRRIGSNVNTIALDPQE 346

Query: 359 DLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQAPTW----------SPSGRSLIF 406
             +  +          +   D  GS  RL      +    W          SP G  L+F
Sbjct: 347 RCLYASVRGKNGSRGYLYAGDEFGSLVRLDARSGRVLDMVWGGNQPTGLDLSPDGSLLVF 406

Query: 407 S 407
           S
Sbjct: 407 S 407



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 38/227 (16%), Positives = 77/227 (33%), Gaps = 15/227 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P ++++  +      I        R  ++    G++  +++    + +  R  +S    +
Sbjct: 175 PERRELWVSQMTTGKIHIFETGTYRFKQSISAGGSWPKVLIT---NPSHSRVYVSHWIGQ 231

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           +  +  +D+ +    R  +   I    + SPD  ++   +  +G   + V+     +   
Sbjct: 232 S--VAEIDVATRRVLRTFSVDGIPRGMAISPDGKKLYIANFSDGN--IAVVDLRTGEGHS 287

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTW 397
           I +    +    V    G  + F+      +   V   D   ERLL      SN+     
Sbjct: 288 I-ETGPGAMRHLVIDTAGRRLYFSDM----YHGSVGSIDTRTERLLWRRRIGSNVNTIAL 342

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            P  R L  S +    +   LY+ D  G    L        D  W G
Sbjct: 343 DPQERCLYASVRGKNGSRGYLYAGDEFGSLVRLDARSGRVLDMVWGG 389


>gi|225055399|gb|ACN80685.1| Tsr5 [Streptomyces laurentii]
          Length = 1447

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/289 (15%), Positives = 95/289 (32%), Gaps = 33/289 (11%)

Query: 134  KDRKQIIGKKFFSSPASWRKIAHTISDDI-YQSITGEKGDFNSRILFVSESVVSGIIKNS 192
             D + + G         W  +AH   D    + +         RI + S    +  + N 
Sbjct: 950  ADGRTLTGAWRNGPVRVW-DLAH--PDRAPVEPVPPLPSASGYRIAY-SPDGRTLAMGND 1005

Query: 193  LCVMDRDGANIRYLTPSR-----DQILFEPRFSPNQQKVAYATYDDEDILRVY-LMDTRI 246
              V   D A+       R        +    FS + Q +A +  D    +R++ + D   
Sbjct: 1006 ARVWLWDLADPARPVRLRFYLPAAGDVLSLAFSADGQTLAVS--DRGRTVRLWNVTDPAQ 1063

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
              A   +    S +    FS +G+  +    +   + ++S+         L    +  +S
Sbjct: 1064 SPAGTAVPAPPSNVRGLAFSPDGRTLV-GGTQAGQLQLWSLPG-----RVLPAAAYGALS 1117

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---YFDPVWSPQGDLIAF 363
             +++PD   +      +G  +L+ + S     + +      +        +   G  +A 
Sbjct: 1118 LAFAPDGRTLA-TGGSDGTVRLWNLASPAGAPRPLGTLNTGTTKQVTVLGFGRDGRTLA- 1175

Query: 364  TKFSGEKFAIGVMKK-DGSQERLLV-----EDSNLQAPTWSPSGRSLIF 406
               +G    + +    D ++ R L         +      S  GR+L+F
Sbjct: 1176 ---TGGDGPLVLWDLADPARPRELSRTPGASQGSGDDARLSGDGRTLVF 1221



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 77/234 (32%), Gaps = 15/234 (6%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS---MILAPRFSSNGKRALI 274
            R S + + + +     ED   V +        P   G+       I     S++G+   +
Sbjct: 1211 RLSGDGRTLVF-----EDGATVRVWGLTPPDRPAATGSLPGKEDGIEGLTVSADGRMIGV 1265

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQS 333
              +   + +++              +    + A + S D   +   +D++G+  L+ +  
Sbjct: 1266 -GRHGGSAELWDRAASHRTATLPGPSKQDKLQALALSGDGRTLA-RADQDGELTLWDLAD 1323

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                  R S D   +      + +GDL+A     G     G  +       +      + 
Sbjct: 1324 PARPVARGSSDPRGTTTALAATARGDLVAVGSGEGGIRFTGADRASFLSRAIAGSAQKMV 1383

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ-WVGFM 446
            A  ++P GR+L        D   ++++ D      T+         P  W  ++
Sbjct: 1384 ALAFAPDGRTLA---STAEDQPVRIWTTDPEAAARTVCAATGNVLTPALWAQYV 1434


>gi|213511965|ref|NP_001133382.1| U3 small nucleolar RNA-associated protein 18 homolog [Salmo salar]
 gi|209152691|gb|ACI33125.1| U3 small nucleolar RNA-associated protein 18 homolog [Salmo salar]
          Length = 521

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/224 (15%), Positives = 85/224 (37%), Gaps = 9/224 (4%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF--VSESVVSGIIKNSLCVMDRDG 200
            F  S  S  K    +   ++ +      D  + + F   ++ V++  +  S+ +   DG
Sbjct: 188 NFVGSSDSLPKGIIRMKKCLHANNDRPSEDRLTTVQFHPSAQVVMTAGLDQSISLFQVDG 247

Query: 201 -ANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
             N +  +   ++       FS N ++V   ++ ++      +M+ ++       G    
Sbjct: 248 KTNPKIQSIHLEKFPVHKAQFSVNGEQVVATSFRNKLFYIYDMMEGKVIPVHTVRGLREQ 307

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            +     S +G+  L++     +  ++ + +++    +           ++S D S+ VF
Sbjct: 308 RVKEFEVSPDGESLLLTGT---SGYLHVLTMKTKEVVKSMKINGNIAGVAFSHDGSK-VF 363

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +  EG+  ++ M+ +     R + D   S      S  G  +A
Sbjct: 364 TNSEEGEVYIWDMR-SSKCLNRFTDDGCVSGTSMAASKNGQYLA 406


>gi|149633049|ref|XP_001506726.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 450

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 83/225 (36%), Gaps = 16/225 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L + D +   I  L    DQI +   +S +   +         +++V+ M+      
Sbjct: 28  QYRLVIRDVNTLQILQLYTCLDQIQYV-EWSADSLFIL-CAMYKRGLVQVWSMEQPDWHC 85

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
             +I    + ++A  +S +G+  L + +    + ++S  L + +   +          ++
Sbjct: 86  --KIDEGSAGLVASCWSPDGRHILNTTEFHLRITVWS--LCTKSVSYIKYPKACQQGITF 141

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   +     R+ K+ + +   +     R             W+P G ++A    +  
Sbjct: 142 TKDGRYMALAERRDCKDYISLFVCSDWQLLRHFDTDTQDLAGIEWAPNGCVLA-VWDTCL 200

Query: 370 KFAIGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSR 408
           ++ + +   DG   RLL           +++  WSPS + L    
Sbjct: 201 EYKVLLYSLDG---RLLSTYCAYEWSLGVKSIAWSPSSQFLAIGS 242



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 53/158 (33%), Gaps = 11/158 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDRE 323
           FS +GK     VQ      +   D+ +    +L T    I     +S DS  I+    + 
Sbjct: 16  FSPDGKYLASCVQ----YRLVIRDVNTLQILQLYTCLDQIQYV-EWSADSLFILCAMYKR 70

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  Q++ M+      K    +  A      WSP G  I     +     I V        
Sbjct: 71  GLVQVWSMEQPDWHCK--IDEGSAGLVASCWSPDGRHIL--NTTEFHLRITVWSLCTKSV 126

Query: 384 RLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             +       Q  T++  GR +  + ++D      L+ 
Sbjct: 127 SYIKYPKACQQGITFTKDGRYMALAERRDCKDYISLFV 164


>gi|158334235|ref|YP_001515407.1| hypothetical protein AM1_1053 [Acaryochloris marina MBIC11017]
 gi|158304476|gb|ABW26093.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
          Length = 458

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 65/175 (37%), Gaps = 31/175 (17%)

Query: 264 RFSSNGKRALISVQKDEAMD----------------IYSVDLQSNATERLTNTLFINISA 307
             S +G+RA ++  +    D                I  VD+   +  ++  T+ +  + 
Sbjct: 113 AVSPDGQRAYVAEVRSRPADGIQSFDDIDQMPPGEKITVVDIADRSQPKVLETIKVGRNP 172

Query: 308 ---SYSPDSSQIVFESDREGKEQLYV-MQSNGSDQKRI-----SQDKEASYFDPVWSPQG 358
              S SPD   +    +  GKE L V ++++G+   R      +          +W P G
Sbjct: 173 EHLSLSPDGRFLAVNLNEPGKELLIVQIKADGTLGHRTYFPVKTVGTREDNQTAIWHPSG 232

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERL------LVEDSNLQAPTWSPSGRSLIFS 407
             +A  +    +     ++ D  +  L      L   ++L  P ++  GR ++ +
Sbjct: 233 QYLAMIQAKNRRLGFYRVQTDNEEINLTPVTDPLPLGNHLSHPRFTADGRFVLVT 287


>gi|308813103|ref|XP_003083858.1| transducin family protein / WD-40 repeat family protein (ISS)
           [Ostreococcus tauri]
 gi|116055740|emb|CAL57825.1| transducin family protein / WD-40 repeat family protein (ISS)
           [Ostreococcus tauri]
          Length = 836

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 76/207 (36%), Gaps = 29/207 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +PN ++VA A+ D      V +      +    +  F   + A  +S +GK         
Sbjct: 65  APNGKRVATASAD----YCVKIFSIDKGQFEGNVTRFTLPVHAVAWSGDGKYIA---AGG 117

Query: 280 EAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           E   +  +D +    +       +  I  S S+ P    +   SD  G   ++V++    
Sbjct: 118 EDGVVKVIDAEDKTVKCTIECPRSKCIK-SLSFDPRGEFLA-GSDDNGTVFVWVLKPRDE 175

Query: 337 DQK-----------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +++            ++  +        W P G ++A     G +  +   +++  ++  
Sbjct: 176 NEEVGDAILFATEAPVATGESPLLNSVAWRPDGAVLAV---PGRENDVTFFERETFKQIE 232

Query: 386 LVEDSNLQAPT---WSPSGRSLIFSRK 409
                + +A +   WSP+G+ L+ +  
Sbjct: 233 WEMKGHTEAISLIRWSPNGKYLVTASD 259


>gi|332820626|ref|XP_526738.3| PREDICTED: WD repeat-containing protein 17 isoform 2 [Pan
           troglodytes]
          Length = 1322

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P     +A  T  +      ++ + 
Sbjct: 411 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNG----AFIWNV 466

Query: 245 RIDRAPKRIGNFRSM-ILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R     +  I    +S  + KR       D    I ++D       +      
Sbjct: 467 QKGKIIQRFNEHGTNGIFCVAWSHKDSKRIATCSS-DGFCIIRTID--GKVLHKY-KHPA 522

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 523 AVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGIL 582

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 583 CSGSDDGTVRIWDYTQD 599


>gi|332820624|ref|XP_003310622.1| PREDICTED: WD repeat-containing protein 17 isoform 1 [Pan
           troglodytes]
          Length = 1283

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P     +A  T  +      ++ + 
Sbjct: 387 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNG----AFIWNV 442

Query: 245 RIDRAPKRIGNFRSM-ILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R     +  I    +S  + KR       D    I ++D       +      
Sbjct: 443 QKGKIIQRFNEHGTNGIFCVAWSHKDSKRIATCSS-DGFCIIRTID--GKVLHKY-KHPA 498

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 499 AVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGIL 558

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 559 CSGSDDGTVRIWDYTQD 575


>gi|312892178|ref|ZP_07751675.1| Dipeptidyl-peptidase IV [Mucilaginibacter paludis DSM 18603]
 gi|311295308|gb|EFQ72480.1| Dipeptidyl-peptidase IV [Mucilaginibacter paludis DSM 18603]
          Length = 829

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 86/264 (32%), Gaps = 34/264 (12%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG---N 255
           +G NI  +   + +      +SP+ +  A    D+  +  ++++++  D  P        
Sbjct: 239 NGTNIDEIKNRKKRKPTSVLWSPDAKHFALIRSDERKVKDLWVINSIADPRPTLETYKYE 298

Query: 256 FRSMILAPR---FSSN-----GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                  PR   +  +     GK+  +S+ KD+ +  +S   ++                
Sbjct: 299 MPGEAEQPRKELWLFDFAAKTGKKLNVSLFKDQELSTWSAPAKARN-------RDDEFRP 351

Query: 308 S-YSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWS-P----QGD 359
           S +   +S+  F   R G++  ++ V   + +  K   Q +E        S P     G 
Sbjct: 352 SIWLGTNSEFYF--YRTGRDLKRIDVCSVDINTAKVTVQVQERMNIYVEISKPGLINGGK 409

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-SLIFSRKKDGDTGSK- 417
            +             +    G  +  +           +   +  +++      +     
Sbjct: 410 ELIEWSERDGWAHFYLYDDAGHVKNQITSGQFHCDDIINIDEKNRILYFTASGREPNENP 469

Query: 418 ----LYSIDLNGRNETLINTPAYA 437
               LYSI L+G    L+N   + 
Sbjct: 470 YYTHLYSIKLDGTGLKLLNAGNFD 493


>gi|115956151|ref|XP_001188191.1| PREDICTED: similar to fizzy-related protein [Strongylocentrotus
            purpuratus]
          Length = 1356

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/254 (11%), Positives = 79/254 (31%), Gaps = 14/254 (5%)

Query: 157  TISDDIYQSITGEKGDFNSRILFVSESVVS----GIIKNSLCVMDRDGANIRYLTPSRDQ 212
            +  +     +    GD ++          +    G  K  + V D       +       
Sbjct: 1088 SACNSQVTRLCDLSGDGDTVTSVSWNERGNLVAVGTHKGLVQVWDYAAQKKLHALDGHAA 1147

Query: 213  ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             +    ++ +                +   D R+    +R+G  R  +   ++S + +  
Sbjct: 1148 RVGALAWNADSLC------SGSRDRMILQRDIRVPGVIRRLGGHRQEVCGLKWSPDHQHL 1201

Query: 273  LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
              S   D  + +++    ++  ++ T       + ++SP    ++  S     ++     
Sbjct: 1202 A-SGGNDNRLFVWNHS-STSPVQQYTEHSAAVKAIAWSPHQHGLL-ASGGGTADRCIRFW 1258

Query: 333  SNGSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            +  + Q     D  +   +  WS    +L++   +S  +  +          +L      
Sbjct: 1259 NTLTSQPLNYVDTVSQVCNLAWSKHDNELVSTHGYSQNQILVWKYPSLVQVAKLTGHTYR 1318

Query: 392  LQAPTWSPSGRSLI 405
            +     SP G +++
Sbjct: 1319 VLYLAVSPDGEAIV 1332


>gi|67906760|gb|AAY82823.1| predicted WD domain/cytochrome C family protein [uncultured
           bacterium MedeBAC46A06]
          Length = 439

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 104/299 (34%), Gaps = 33/299 (11%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           +    +   T   G      +    S+ VS     S  V        + +  + +  +  
Sbjct: 8   VPAQAFDRYTAHGGPVRDLTISPDGSMLVSASFDYSAVVWTAPQITEKSVLYAHEAAVNT 67

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            RFSP+   +A A  D    L    +    D  P  +   +  ++   FS +G     S 
Sbjct: 68  ARFSPDGTLLATAGDDGRIYLWKKGVLASEDPEPIILTGHKGKVVNLAFSDDGSLLA-SA 126

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFI--NISAS----YSPDSSQIVFESDREGKEQLYV 330
             D ++ ++   L         ++ FI  +        ++P+ + + + +  +G+ + + 
Sbjct: 127 SWDGSVGLW--PLDGGLESAAADSRFIFGHDGPVNMVQFAPNGTHL-YSAGYDGQIRYWK 183

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +  NG   + + ++    +   V S     D+IAF    G    I  +       R+   
Sbjct: 184 LS-NGEYLRSVVRNG---WSVSVMSVDEANDMIAFGSSDGT-MNIERLSDGKGILRI--- 235

Query: 389 DSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             + + P      SP    L F     G+   ++  I+   ++ +++     A+ P W 
Sbjct: 236 -GDERVPVLAIYHSPWHNMLAF-----GNAKGRVVVINT--KDWSIVRDFNAANGPIWS 286


>gi|320031360|gb|EFW13330.1| WD repeat protein [Coccidioides posadasii str. Silveira]
          Length = 515

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 86/272 (31%), Gaps = 52/272 (19%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G   ++  + D D     +        +    +SPN + +A  + D+     V 
Sbjct: 158 SSRMATGSGDSTARIWDCDTGTPIHTLKGHSSWVLAVSWSPNDKILATGSMDN----TVR 213

Query: 241 LMDTRIDRA-PKRIGNFRSMILAPRFSS----N-GKRALISVQKDEAMDIYSVDLQSNAT 294
           L D +  +A    +      I++  +      + G+  L S  KD  + I+ V +     
Sbjct: 214 LWDPKTGQALGAPLKGHTKWIMSLAWEPYHLQDPGRPRLASASKDSTVRIWDV-VSKRIE 272

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------------ 342
             LT          +    +  ++ S  +   +++    +GS  + +S            
Sbjct: 273 NVLTGHKGSVSCVRWG--GTARIYTSSHDKTIKIWN-PKDGSLIQTLSSHTHRVNHLALS 329

Query: 343 -----QDKEASYFDPVWSPQGDLIAFTKFS------------------GEKFAIGVMKKD 379
                +     +  PV     D IA  K                     + F + +    
Sbjct: 330 TDFFLRTSFYEHNTPVPDSDTDRIALAKRRFEKAATINGKLTERLVSASDDFTMFLWDPA 389

Query: 380 GSQE---RLLVEDSNLQAPTWSPSGRSLIFSR 408
            S +   R+L     +   T+SP G  +  + 
Sbjct: 390 SSNKPISRMLGHQKEVNHVTFSPDGAYIASAS 421



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 57/139 (41%), Gaps = 9/139 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           ++E +VS     ++ + D   +N          + +    FSP+   +A A++D+     
Sbjct: 370 LTERLVSASDDFTMFLWDPASSNKPISRMLGHQKEVNHVTFSPDGAYIASASFDN----H 425

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
           V L + R  +    +      +    FS++  R L+S  KD  + ++  D+++      L
Sbjct: 426 VKLWNARDGKFMTSLRGHVGAVYQCCFSAD-SRLLVSSSKDTTLKVW--DVRTGKLAMDL 482

Query: 298 TNTLFINISASYSPDSSQI 316
                   +  +SPD  ++
Sbjct: 483 PGHQDEVYAVDWSPDGEKV 501



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 39/131 (29%), Gaps = 6/131 (4%)

Query: 232 DDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L D      P  R+   +  +    FS +G     S   D  + +++    
Sbjct: 376 SASDDFTMFLWDPASSNKPISRMLGHQKEVNHVTFSPDGAYIA-SASFDNHVKLWNA-RD 433

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 L   +       +S DS  +V  S       L V               +   +
Sbjct: 434 GKFMTSLRGHVGAVYQCCFSADSRLLVSSSK---DTTLKVWDVRTGKLAMDLPGHQDEVY 490

Query: 351 DPVWSPQGDLI 361
              WSP G+ +
Sbjct: 491 AVDWSPDGEKV 501



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 42/326 (12%), Positives = 96/326 (29%), Gaps = 47/326 (14%)

Query: 111 LVTGRVIKE----GKDRLRVEFRLWDVKDRKQIIG------------------------- 141
           ++               +    RLWD K  + +                           
Sbjct: 191 VLAVSWSPNDKILATGSMDNTVRLWDPKTGQALGAPLKGHTKWIMSLAWEPYHLQDPGRP 250

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DG 200
           +   +S  S  +I   +S  I   +TG KG  +      +  + +     ++ + +  DG
Sbjct: 251 RLASASKDSTVRIWDVVSKRIENVLTGHKGSVSCVRWGGTARIYTSSHDKTIKIWNPKDG 310

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           + I+ L+    ++      + +       ++ + +         RI  A +R     ++ 
Sbjct: 311 SLIQTLSSHTHRVNHL---ALSTDFFLRTSFYEHNTPVPDSDTDRIALAKRRFEKAATIN 367

Query: 261 LAPRFSSNGK--RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                   GK    L+S   D  M ++     +    R+          ++SPD + I  
Sbjct: 368 --------GKLTERLVSASDDFTMFLWDPASSNKPISRMLGHQKEVNHVTFSPDGAYIAS 419

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S       + +  +         +    + +   +S    L+  +        +  ++ 
Sbjct: 420 ASF---DNHVKLWNARDGKFMTSLRGHVGAVYQCCFSADSRLLV-SSSKDTTLKVWDVRT 475

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSL 404
                 L      + A  WSP G  +
Sbjct: 476 GKLAMDLPGHQDEVYAVDWSPDGEKV 501


>gi|298374715|ref|ZP_06984673.1| OmpA family protein [Bacteroides sp. 3_1_19]
 gi|298269083|gb|EFI10738.1| OmpA family protein [Bacteroides sp. 3_1_19]
          Length = 658

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 51/152 (33%), Gaps = 24/152 (15%)

Query: 299 NTLFINISASYSPDSSQIVFES---DREG--KEQLYVMQSNG-----SDQKRISQDKEAS 348
           NT +   + S+SPD + + +     D EG    ++Y+   +        +  I +D   +
Sbjct: 225 NTEYDEGTPSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTA 284

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQ-------ERLLVEDSNLQAPTWS 398
              P  SP G  + F   +   F    I   +  G+           +    +   P   
Sbjct: 285 LGHPSISPDGKYLYFVSDAVGGFGGKDIFRARVAGNDFGPMENLGEEINTPGDEMFPYVR 344

Query: 399 PSGRSLIFSRK-KDGDTGSKLYSI--DLNGRN 427
               +L F+     G  G  L+    D  G+ 
Sbjct: 345 -DSVTLYFASNGHPGMGGLDLFKATQDSTGKW 375



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 20/117 (17%)

Query: 344 DKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKD------GSQERLLVED-SN 391
           + E     P +SP G+ + +T             I +  +       G++  ++ +  + 
Sbjct: 225 NTEYDEGTPSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTA 284

Query: 392 LQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRN----ETL---INTPAYASDP 440
           L  P+ SP G+ L F      G  G  ++   + G +    E L   INTP     P
Sbjct: 285 LGHPSISPDGKYLYFVSDAVGGFGGKDIFRARVAGNDFGPMENLGEEINTPGDEMFP 341



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 39/135 (28%), Gaps = 21/135 (15%)

Query: 217 PRFSPNQQK--VAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILA---PRFSS 267
           P FSP+       Y   D E      + +    +       R    +  + A   P  S 
Sbjct: 233 PSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTALGHPSISP 292

Query: 268 NGKRALISVQKDEAM---DIYSVDLQS---NATERL---TNTLFINISASYSPDSSQIVF 318
           +GK               DI+   +        E L    NT    +   Y  DS  + F
Sbjct: 293 DGKYLYFVSDAVGGFGGKDIFRARVAGNDFGPMENLGEEINTPGDEMFP-YVRDSVTLYF 351

Query: 319 ESDREGKEQLYVMQS 333
            S+  G   +  +  
Sbjct: 352 ASN--GHPGMGGLDL 364



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 28/90 (31%), Gaps = 14/90 (15%)

Query: 262 APRFSSNGKRALISV-----QKDEAMDIYSVDLQS---NATERLTNTLFINI---SASYS 310
            P FS +G     +      +     +IY     S       R T            S S
Sbjct: 232 TPSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTALGHPSIS 291

Query: 311 PDSSQIVFESDREGKEQ---LYVMQSNGSD 337
           PD   + F SD  G      ++  +  G+D
Sbjct: 292 PDGKYLYFVSDAVGGFGGKDIFRARVAGND 321


>gi|196229962|ref|ZP_03128826.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Chthoniobacter flavus Ellin428]
 gi|196226288|gb|EDY20794.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Chthoniobacter flavus Ellin428]
          Length = 790

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 52/158 (32%), Gaps = 16/158 (10%)

Query: 264 RFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLT---NTLFIN----ISASYSPDSS 314
           R++           +       I  V   +  T  +    +  FI+        +   + 
Sbjct: 337 RWAPRSDEFFFDYNQRGHQLYRIIGVKAATGTTRAVVEEKSATFIDYTKKTWRQWLDKTG 396

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---- 370
           ++++ S+R+G  +LY+       QK +    +    +     +     +   SG +    
Sbjct: 397 ELLWMSERDGWCRLYLYDVATGTQKALVTPGQGVVRNVEKVDEEKREVWYLASGLRANED 456

Query: 371 ---FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                +  +  DG+    L +       T+SP GR  +
Sbjct: 457 PYHQHLCRVNFDGTGFAQLTQGDGNHEVTFSPDGRYFV 494


>gi|149177624|ref|ZP_01856226.1| hypothetical protein PM8797T_00417 [Planctomyces maris DSM 8797]
 gi|148843604|gb|EDL57965.1| hypothetical protein PM8797T_00417 [Planctomyces maris DSM 8797]
          Length = 359

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 86/279 (30%), Gaps = 23/279 (8%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           F+S S+     K  L      G N  Y+   +        +    +   +      +IL 
Sbjct: 84  FMSFSIDPQTGKLKLISSIPAGGNAAYIATDKSGGYLFSAYYGEGKVAVHRLGKQGEILE 143

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEAMDIYSVDLQSNATERL 297
             L      +    I   ++      F    G   +     DE   +    L++N   RL
Sbjct: 144 EILQTIPTAKNAHAILPDQNNQF--VFVPHTGPNVIYQFLWDEKQGV----LKANTPPRL 197

Query: 298 TNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--------QDKEAS 348
           +    +     + S D+  + F++++      Y +                        +
Sbjct: 198 SAAAGLEPRHLAVSQDNRFLYFDNEKGSSVTAYKLNPETGILSAFQTVSTLPDEFKGNNT 257

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLI 405
             D   SP GD +  +       A   + +   + + + + +    P      P+GR L 
Sbjct: 258 CADIELSPSGDYLYASNRGHNSIACFAVDQQTGRLKSIGQAATEDTPRSFNIDPTGRFLY 317

Query: 406 FSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQWV 443
            + +K+G   +  Y I   +G  E         S P WV
Sbjct: 318 AAGQKNGKLAA--YKISPEDGTLERFATYEVGKS-PSWV 353


>gi|148689322|gb|EDL21269.1| acylpeptide hydrolase, isoform CRA_d [Mus musculus]
          Length = 718

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 17/131 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD----DEDILRVYLMD 243
             +++L  +D  G     L       +  PR SP+Q +V Y  Y          +++L D
Sbjct: 278 NRRSALYYVDLSGGKCE-LLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYD 336

Query: 244 TRI-------DRAPKRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQS 291
                     D  P+++G   S I         +S++ +R +    +    D+++VD Q+
Sbjct: 337 WYTKVTSLVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQT 396

Query: 292 NATERLTNTLF 302
            +   LT    
Sbjct: 397 GSVTSLTAGGS 407



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 66/188 (35%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D +  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 225 LCVLDIESGNISVLEGVPENVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRYCTNRRSALY 284

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEA-MDIYSVDLQSNA-- 293
            +D    +  + + +    + +PR S +  R +     S+        ++  D  +    
Sbjct: 285 YVDLSGGKC-ELLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYDWYTKVTS 343

Query: 294 ------TERLTNT-LFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  +   I  S      +S DS ++VF+S +  ++ L+ + +       ++
Sbjct: 344 LVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQTGSVTSLT 403

Query: 343 QDKEASYF 350
               A  +
Sbjct: 404 AGGSAGSW 411



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 38/136 (27%), Gaps = 19/136 (13%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQ- 332
           +    +Y VDL     E L++      S   SPD  ++V+             QL++   
Sbjct: 278 NRRSALYYVDLSGGKCELLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYDW 337

Query: 333 -------SNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                        +++ +     Y        WS     + F      +  +  +     
Sbjct: 338 YTKVTSLVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQTG 397

Query: 382 QERLLVEDSNLQAPTW 397
               L    +    +W
Sbjct: 398 SVTSLTAGGSAG--SW 411


>gi|214010153|ref|NP_666338.2| acylamino-acid-releasing enzyme [Mus musculus]
 gi|148689319|gb|EDL21266.1| acylpeptide hydrolase, isoform CRA_a [Mus musculus]
          Length = 732

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 17/131 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD----DEDILRVYLMD 243
             +++L  +D  G     L       +  PR SP+Q +V Y  Y          +++L D
Sbjct: 277 NRRSALYYVDLSGGKCE-LLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYD 335

Query: 244 TRI-------DRAPKRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQS 291
                     D  P+++G   S I         +S++ +R +    +    D+++VD Q+
Sbjct: 336 WYTKVTSLVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQT 395

Query: 292 NATERLTNTLF 302
            +   LT    
Sbjct: 396 GSVTSLTAGGS 406



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 66/188 (35%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D +  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 224 LCVLDIESGNISVLEGVPENVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRYCTNRRSALY 283

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEA-MDIYSVDLQSNA-- 293
            +D    +  + + +    + +PR S +  R +     S+        ++  D  +    
Sbjct: 284 YVDLSGGKC-ELLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYDWYTKVTS 342

Query: 294 ------TERLTNT-LFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  +   I  S      +S DS ++VF+S +  ++ L+ + +       ++
Sbjct: 343 LVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQTGSVTSLT 402

Query: 343 QDKEASYF 350
               A  +
Sbjct: 403 AGGSAGSW 410



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 38/136 (27%), Gaps = 19/136 (13%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQ- 332
           +    +Y VDL     E L++      S   SPD  ++V+             QL++   
Sbjct: 277 NRRSALYYVDLSGGKCELLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYDW 336

Query: 333 -------SNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                        +++ +     Y        WS     + F      +  +  +     
Sbjct: 337 YTKVTSLVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQTG 396

Query: 382 QERLLVEDSNLQAPTW 397
               L    +    +W
Sbjct: 397 SVTSLTAGGSAG--SW 410


>gi|19343726|gb|AAH25494.1| Acylpeptide hydrolase [Mus musculus]
          Length = 717

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 17/131 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD----DEDILRVYLMD 243
             +++L  +D  G     L       +  PR SP+Q +V Y  Y          +++L D
Sbjct: 277 NRRSALYYVDLSGGKCE-LLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYD 335

Query: 244 TRI-------DRAPKRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQS 291
                     D  P+++G   S I         +S++ +R +    +    D+++VD Q+
Sbjct: 336 WYTKVTSLVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQT 395

Query: 292 NATERLTNTLF 302
            +   LT    
Sbjct: 396 GSVTSLTAGGS 406



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 66/188 (35%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D +  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 224 LCVLDIESGNISVLEGVPENVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRYCTNRRSALY 283

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEA-MDIYSVDLQSNA-- 293
            +D    +  + + +    + +PR S +  R +     S+        ++  D  +    
Sbjct: 284 YVDLSGGKC-ELLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYDWYTKVTS 342

Query: 294 ------TERLTNT-LFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  +   I  S      +S DS ++VF+S +  ++ L+ + +       ++
Sbjct: 343 LVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQTGSVTSLT 402

Query: 343 QDKEASYF 350
               A  +
Sbjct: 403 AGGSAGSW 410



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 38/136 (27%), Gaps = 19/136 (13%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQ- 332
           +    +Y VDL     E L++      S   SPD  ++V+             QL++   
Sbjct: 277 NRRSALYYVDLSGGKCELLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYDW 336

Query: 333 -------SNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                        +++ +     Y        WS     + F      +  +  +     
Sbjct: 337 YTKVTSLVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQTG 396

Query: 382 QERLLVEDSNLQAPTW 397
               L    +    +W
Sbjct: 397 SVTSLTAGGSAG--SW 410


>gi|38257673|sp|Q8R146|APEH_MOUSE RecName: Full=Acylamino-acid-releasing enzyme; Short=AARE; AltName:
           Full=Acyl-peptide hydrolase; Short=APH; AltName:
           Full=Acylaminoacyl-peptidase
          Length = 732

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 17/131 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD----DEDILRVYLMD 243
             +++L  +D  G     L       +  PR SP+Q +V Y  Y          +++L D
Sbjct: 277 NRRSALYYVDLSGGKCE-LLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYD 335

Query: 244 TRI-------DRAPKRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQS 291
                     D  P+++G   S I         +S++ +R +    +    D+++VD Q+
Sbjct: 336 WYTKVTSLVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQT 395

Query: 292 NATERLTNTLF 302
            +   LT    
Sbjct: 396 GSVTSLTAGGS 406



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 66/188 (35%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D +  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 224 LCVLDIESGNISVLEGVPENVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRYCTNRRSALY 283

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEA-MDIYSVDLQSNA-- 293
            +D    +  + + +    + +PR S +  R +     S+        ++  D  +    
Sbjct: 284 YVDLSGGKC-ELLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYDWYTKVTS 342

Query: 294 ------TERLTNT-LFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  +   I  S      +S DS ++VF+S +  ++ L+ + +       ++
Sbjct: 343 LVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQTGSVTSLT 402

Query: 343 QDKEASYF 350
               A  +
Sbjct: 403 AGGSAGSW 410



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 38/136 (27%), Gaps = 19/136 (13%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQ- 332
           +    +Y VDL     E L++      S   SPD  ++V+             QL++   
Sbjct: 277 NRRSALYYVDLSGGKCELLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYDW 336

Query: 333 -------SNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                        +++ +     Y        WS     + F      +  +  +     
Sbjct: 337 YTKVTSLVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQTG 396

Query: 382 QERLLVEDSNLQAPTW 397
               L    +    +W
Sbjct: 397 SVTSLTAGGSAG--SW 410


>gi|308071296|ref|YP_003872901.1| hypothetical protein PPE_04604 [Paenibacillus polymyxa E681]
 gi|305860575|gb|ADM72363.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 479

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/249 (17%), Positives = 88/249 (35%), Gaps = 21/249 (8%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
           ++T E+G  +     V           S   +     +       RD  +   R + +  
Sbjct: 59  ALTIEEGKEDPAAFLVQLEGAKVERFLSAEKLISLLQSKEDKEKYRDSYISVGRITDDGN 118

Query: 225 KVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++A+     ++   I+++Y +D+        +   R     P  SS+  + L   +K + 
Sbjct: 119 QIAFVLDLFKEARLIIQIYDLDSGNKANEFELPYNR-----PVISSDLTKYLY--EKKDK 171

Query: 282 MDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             IY      +   RL +   I++       +SPDS+Q  F    + ++ + V   +   
Sbjct: 172 AYIYDTLTDQSTAIRL-DGSSIDVDDINQGRFSPDSTQFCFT---DTQQNIVVFNVSDYR 227

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             +             W+ Q D I ++  S       ++     +ERLL     ++ P  
Sbjct: 228 TLKKIHIDSGMAIVNQWA-QKDKIIYSIDSMSVTKTYLLNVSNGEERLL--GKGIERPLI 284

Query: 398 SPSGRSLIF 406
           S  G  L F
Sbjct: 285 SRDGSKLWF 293


>gi|296534759|ref|ZP_06897128.1| peptidase C14 [Roseomonas cervicalis ATCC 49957]
 gi|296264914|gb|EFH11170.1| peptidase C14 [Roseomonas cervicalis ATCC 49957]
          Length = 287

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 62/194 (31%), Gaps = 17/194 (8%)

Query: 218 RFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             SP+  + A+A  +     +    +Y+ DT   R   R+    + +     S +G R  
Sbjct: 101 ALSPDGSR-AFAAGNTCRAWDGSFCIYVFDTGTGRLAARLPGLPAPVQHLAISPDGTRLA 159

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP-DSSQIVFESDREGKEQLYVMQ 332
            ++       I   D ++     + +       A     D    +  S  +GK +LY   
Sbjct: 160 AAL--GGRAGIRVWDARTGRA--VFDDTAYAGPARMVAFDREGRLASSSADGKLRLY--D 213

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           + G      +    A  F    SP G L+A       +  I +   D     +       
Sbjct: 214 ARGRKLAERAPLANARPFGIALSPDGTLLAVGYEDRLRVEI-LALPDLRSVAVPDASGLQ 272

Query: 393 Q----APTWSPSGR 402
                A  W+  GR
Sbjct: 273 GEGLPAVAWASDGR 286


>gi|330900301|gb|EGH31720.1| hypothetical protein PSYJA_23188 [Pseudomonas syringae pv. japonica
           str. M301072PT]
          Length = 377

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 69/186 (37%), Gaps = 26/186 (13%)

Query: 260 ILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              PR   FSS+GK   +  +    +  ++++ ++ A ++ +    I    + +P  ++ 
Sbjct: 199 NTGPRHLAFSSDGKFLYVVGEMSGTVMAFAINQKTGALKQTSQADGIPKRLNLAPGQARD 258

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              +D +      +  ++                    +P G  +  ++ +    ++  +
Sbjct: 259 ARNNDLKDDPTPRIWAAD-----------------IRIAPNGKWLFISERTSSSVSVFTV 301

Query: 377 KKDGSQE----RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +    +        V++   +    SP+GR L+ S +K    GS  Y+I   G  + +  
Sbjct: 302 EPTNGKVAFVDNYPVQEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIGEKGALQRVSE 359

Query: 433 TPAYAS 438
            P+   
Sbjct: 360 APSGKG 365


>gi|328770992|gb|EGF81033.1| hypothetical protein BATDEDRAFT_35019 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 531

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 88/261 (33%), Gaps = 28/261 (10%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +    GD  +RI   SE+ VS      +             +    + +    +SP+   
Sbjct: 211 LATGSGDGTARIWSTSENTVSNSQYPVVL--------QHSSSSGETKDVTTLDWSPDGVF 262

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A  +YD   + R++     I     +    +  + + R+  NG   L+S   D    ++
Sbjct: 263 LATGSYD--GLARIWHKTGTIKFTMHK---HQGPVFSLRWGKNGD-LLLSGSVDRTAIVW 316

Query: 286 SVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             D ++     +        +   +  DS+     +D    +Q+Y+ Q    +  +    
Sbjct: 317 --DAKTGEARQQFQFHSGPTLDVDWKDDSTFATCSTD----KQIYICQLGSLEPLKHFTG 370

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP----S 400
            E       W   G  +A          +  + +D     L+     +    WSP    +
Sbjct: 371 HEGEVNAIKWDSNGTYLASCS-DDHTAKVWSLDQDTPVWDLVGHQKEIYTMRWSPRSAEN 429

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
            +  +F      D+  ++++I
Sbjct: 430 NK--LFLATASFDSEVRIWNI 448



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 91/278 (32%), Gaps = 27/278 (9%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           D++   +F++     G+ +    +  + G  I++        +F  R+  N   +   + 
Sbjct: 255 DWSPDGVFLATGSYDGLAR----IWHKTGT-IKFTMHKHQGPVFSLRWGKNGDLLLSGSV 309

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D        + D +   A ++        L   +  +   A  S  K     IY   L S
Sbjct: 310 DR----TAIVWDAKTGEARQQFQFHSGPTLDVDWKDDSTFATCSTDK----QIYICQLGS 361

Query: 292 NAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
               +  T       +  +  + + +   SD +   +++ +  +      +   KE   +
Sbjct: 362 LEPLKHFTGHEGEVNAIKWDSNGTYLASCSD-DHTAKVWSLDQDTPVWDLVGHQKE--IY 418

Query: 351 DPVWSP----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
              WSP       L   T     +  I  ++ DG+   +L      + + ++SP    L+
Sbjct: 419 TMRWSPRSAENNKLFLATASFDSEVRIWNIQ-DGTCMYVLTGHTDAVYSVSFSPD---LM 474

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           +      D    L+S+  +G             +  W 
Sbjct: 475 YLASGSFDHCVFLWSLK-DGALLKTHQGGGGVFEVGWS 511


>gi|218184026|gb|EEC66453.1| hypothetical protein OsI_32506 [Oryza sativa Indica Group]
          Length = 130

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 51/117 (43%), Gaps = 12/117 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ Q +A A++D      V L +    +         + +    +S++  R L+S  K
Sbjct: 25  FSPDGQWLASASFDK----SVKLWNGITGKFVAAFRGHVADVYQISWSAD-SRLLLSGSK 79

Query: 279 DEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           D  + ++  D+++   ++ L        +  +SPD  ++       GK+++  +  N
Sbjct: 80  DSTLKVW--DIRTRKLKQDLPGHADEVYAVDWSPDGEKVA----SGGKDRVLKLWMN 130



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 31/114 (27%), Gaps = 11/114 (9%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +   S     + + +            +   A  +   WS    L+       
Sbjct: 25  FSPDGQWLASASF---DKSVKLWNGITGKFVAAFRGHVADVYQISWSADSRLLLSGSKDS 81

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
               + V      + +  +     +     WSP G  +        D   KL+ 
Sbjct: 82  T---LKVWDIRTRKLKQDLPGHADEVYAVDWSPDGEKVA---SGGKDRVLKLWM 129



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G+    S   D+++ +++  +           +      S+S DS  ++  S    
Sbjct: 25  FSPDGQWLA-SASFDKSVKLWN-GITGKFVAAFRGHVADVYQISWSADSRLLLSGSK--- 79

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              L V        K+         +   WSP G+ +A
Sbjct: 80  DSTLKVWDIRTRKLKQDLPGHADEVYAVDWSPDGEKVA 117


>gi|150010324|ref|YP_001305067.1| outer membrane protein OmpA family protein [Parabacteroides
           distasonis ATCC 8503]
 gi|255012413|ref|ZP_05284539.1| outer membrane protein OmpA family protein [Bacteroides sp. 2_1_7]
 gi|262382396|ref|ZP_06075533.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B]
 gi|149938748|gb|ABR45445.1| outer membrane protein OmpA family protein [Parabacteroides
           distasonis ATCC 8503]
 gi|262295274|gb|EEY83205.1| outer membrane protein OmpA [Bacteroides sp. 2_1_33B]
          Length = 658

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 51/152 (33%), Gaps = 24/152 (15%)

Query: 299 NTLFINISASYSPDSSQIVFES---DREG--KEQLYVMQSNG-----SDQKRISQDKEAS 348
           NT +   + S+SPD + + +     D EG    ++Y+   +        +  I +D   +
Sbjct: 225 NTEYDEGTPSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTA 284

Query: 349 YFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQ-------ERLLVEDSNLQAPTWS 398
              P  SP G  + F   +   F    I   +  G+           +    +   P   
Sbjct: 285 LGHPSISPDGKYLYFVSDAVGGFGGKDIFRARVAGNDFGPMENLGEEINTPGDEMFPYVR 344

Query: 399 PSGRSLIFSRK-KDGDTGSKLYSI--DLNGRN 427
               +L F+     G  G  L+    D  G+ 
Sbjct: 345 -DSVTLYFASNGHPGMGGLDLFKATQDSTGKW 375



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 20/117 (17%)

Query: 344 DKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKD------GSQERLLVED-SN 391
           + E     P +SP G+ + +T             I +  +       G++  ++ +  + 
Sbjct: 225 NTEYDEGTPSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTA 284

Query: 392 LQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRN----ETL---INTPAYASDP 440
           L  P+ SP G+ L F      G  G  ++   + G +    E L   INTP     P
Sbjct: 285 LGHPSISPDGKYLYFVSDAVGGFGGKDIFRARVAGNDFGPMENLGEEINTPGDEMFP 341



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 39/135 (28%), Gaps = 21/135 (15%)

Query: 217 PRFSPNQQK--VAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILA---PRFSS 267
           P FSP+       Y   D E      + +    +       R    +  + A   P  S 
Sbjct: 233 PSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTALGHPSISP 292

Query: 268 NGKRALISVQKDEAM---DIYSVDLQS---NATERL---TNTLFINISASYSPDSSQIVF 318
           +GK               DI+   +        E L    NT    +   Y  DS  + F
Sbjct: 293 DGKYLYFVSDAVGGFGGKDIFRARVAGNDFGPMENLGEEINTPGDEMFP-YVRDSVTLYF 351

Query: 319 ESDREGKEQLYVMQS 333
            S+  G   +  +  
Sbjct: 352 ASN--GHPGMGGLDL 364



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 28/90 (31%), Gaps = 14/90 (15%)

Query: 262 APRFSSNGKRALISV-----QKDEAMDIYSVDLQS---NATERLTNTLFINI---SASYS 310
            P FS +G     +      +     +IY     S       R T            S S
Sbjct: 232 TPSFSPDGNTMYYTYCAQDPEGPRTAEIYISTRSSAKWGKGTRATIVKDSVTALGHPSIS 291

Query: 311 PDSSQIVFESDREGKEQ---LYVMQSNGSD 337
           PD   + F SD  G      ++  +  G+D
Sbjct: 292 PDGKYLYFVSDAVGGFGGKDIFRARVAGND 321


>gi|109020106|ref|XP_001082212.1| PREDICTED: TAF5-like RNA polymerase II, p300/CBP-associated factor
           (PCAF)-associated factor, 65kDa isoform 2 [Macaca
           mulatta]
          Length = 589

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 68/212 (32%), Gaps = 9/212 (4%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            +++R L  S  ++S     S+   D        L       +++   SP    + +A+ 
Sbjct: 345 VYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP--YSLYFASG 402

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
             +   R++  D       +      + +   +F  N      +   D+ + ++S   Q 
Sbjct: 403 SHDRTARLWSFD--RTYPLRIYAGHLADVDCVKFHPNSNYLA-TGSTDKTVRLWSAQ-QG 458

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           N+    T      +S ++SP+   +         ++L +         +  +    +   
Sbjct: 459 NSVRLFTGHRGPVLSLAFSPNGKYLA---SAGEDQRLKLWDLASGTLYKELRGHTDNITS 515

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             +SP   LIA            +    GS  
Sbjct: 516 LTFSPDSGLIASASMDNSVRVWDIRNTYGSAP 547



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 60/217 (27%), Gaps = 18/217 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDM----SIRYWDLGSFTNTVLYQGHAYPVWDLDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+      ++    + P+S+ +   S   
Sbjct: 393 SP--YSLYFASGSHDRTARLWSFDR--TYPLRIYAGHLADVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              L     N+ + T+SP    +  +   +      +
Sbjct: 503 YKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDI 539


>gi|332258686|ref|XP_003278424.1| PREDICTED: notchless protein homolog 1 isoform 1 [Nomascus
           leucogenys]
          Length = 485

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 60/176 (34%), Gaps = 22/176 (12%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           + R    +      +++  FS  GK    S   D  +  + +  ++             +
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDLSTETPHFT-CRGHRHWVL 160

Query: 306 SASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEA------SYFDPVWSPQ 357
           S S+SPD  ++       G    Q+ +   +   Q   +    +      S+     +P+
Sbjct: 161 SISWSPDGKKLA-----SGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPE 215

Query: 358 GDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
              +A +   G    + +     G  ER+L     ++    W   G  L++S  +D
Sbjct: 216 CRYVASSSKDGS---VRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 266



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 50/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 131 SGSGDTTVRFWDLSTETPHFTCRGHRHWVLSISWSPDGKKLA---SGCKNGQILLWDPST 187

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ I+           LT  
Sbjct: 188 GKQVGRTLAGHSKWITGLSWEPLHANPECRYVA-SSSKDGSVRIWDT-TAGRCERILTGH 245

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V ++      R  Q           S  
Sbjct: 246 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRARDGVLCRTLQGHGHWVNTMALSTD 298



 Score = 43.1 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 396

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 397 KLWDGRMGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 455

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 456 ADEVYAVDWSPDGQRVA 472



 Score = 36.9 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 302 RTGAFEPAEASVNPQDLQGSLQELKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 358

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 359 AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 396

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 397 KLW--DGRMGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAM 450

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 451 DLPGHADEVYAVDWSPDGQRVA 472


>gi|126290217|ref|XP_001367328.1| PREDICTED: similar to WD repeat domain 20 isoform 2 [Monodelphis
           domestica]
          Length = 515

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 63/227 (27%), Gaps = 32/227 (14%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN-------SLCV 195
           +F +    ++ + H+      +     +G    R+ FV+ +  SG            L  
Sbjct: 16  QFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYF 75

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
               G   R +  SR   +   ++ P  + +    +   ++    +  T    AP     
Sbjct: 76  YIYKGVRKRLIDKSRVTCV---KWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLL 132

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +                +   K ++     +        + T         ++SPD   
Sbjct: 133 KQGENF-----------AVHTCKSKSTRNPLL--------KWTVGEGALNEFAFSPDGKF 173

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +   S       L V   +  +     +          WSP G  I 
Sbjct: 174 LACVSQ---DGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIV 217



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 60/212 (28%), Gaps = 44/212 (20%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRF------SSNGKRALISVQKDEA 281
             +   + L   L  +   R  +   N +    +   F      S NG R   +V ++  
Sbjct: 15  TQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELY 74

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM---------- 331
             IY         +RL +         + P S  +   +   G   LY +          
Sbjct: 75  FYIYK-----GVRKRLID-KSRVTCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPH 128

Query: 332 ----------------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                             +  +        E +  +  +SP G  +A     G    + V
Sbjct: 129 YQLLKQGENFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDG---FLRV 185

Query: 376 MKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
              D  +    ++     L    WSP G+ ++
Sbjct: 186 FNFDSVELHGTMKSYFGGLLCVCWSPDGKYIV 217


>gi|71410152|ref|XP_807385.1| notchless homolog [Trypanosoma cruzi strain CL Brener]
 gi|70871374|gb|EAN85534.1| notchless homolog, putative [Trypanosoma cruzi]
          Length = 543

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 70/227 (30%), Gaps = 27/227 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ--QKVAYATYDDEDILRVYLMD 243
           S     ++ V D      R++       +     S +   +  A+   + +   R  +  
Sbjct: 324 SSSQDRTVIVWDASNGTPRHILRGHAHWVNFVALSTDLVIRTGAFDHEEKKFDSREEMQK 383

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R  + +  F                LIS   D  M +++   Q+    RLT     
Sbjct: 384 YAERRYQEVVTRFGYHER-----------LISCSDDNTMFLWAPQEQTTPLGRLTGHQGA 432

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                +SPD + I   S     + + +  +         +   A  +   WS    L+  
Sbjct: 433 VFHIQFSPDGTLIASCS---ADKSVKLWNAADGKFITTFRGHVAPVYHVSWSLDSRLLV- 488

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVED--SNLQ---APTWSPSGRSLI 405
           +        +  + K     R LVED   +     +  WSP G+ + 
Sbjct: 489 SGGRDSTLKLWSVSK-----RELVEDLAGHCDEIFSTDWSPDGQRVA 530



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 57/195 (29%), Gaps = 20/195 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +    FSP+ + +A           + + D       + +    S +    ++
Sbjct: 171 LEGHSEAVLVVTFSPDGEALA----SGGGDKEIRIWDVYTLTPTEELKAHTSWVQVLSWA 226

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP-----DSSQIVFE 319
            +GK  + S  KD  + ++S D        +R           S+ P     D ++ V  
Sbjct: 227 PDGKHLV-SGSKDGTIIVWSHDGMYGNFKGKRHKAHSSYLSHISWEPLHRNIDCNRFVSA 285

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S    K+    +  N +  +      +A      W   G+   ++        +      
Sbjct: 286 S----KDTTLKVWHNVTGVQFSLSGHQACVTCVKW--GGEGFIYSSSQDRTVIVW--DAS 337

Query: 380 GSQERLLVEDSNLQA 394
               R ++       
Sbjct: 338 NGTPRHILRGHAHWV 352



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 110/353 (31%), Gaps = 44/353 (12%)

Query: 109 QVLVT--GRVIKEGKDRLRVEFRLWD---VKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
             +VT  G V +  +    V  RL D   V    Q++     ++P           D++ 
Sbjct: 32  DTVVTEAGAVDEIEEKDKNVMVRLVDEKGVLTGAQLL-LPVTATPKQL--------DELL 82

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            S+  E         F+    V   +++SL    ++    + +   R           + 
Sbjct: 83  CSMLDESARGTPYAFFIDGDQVHDSVRDSLFRRQQEAFVDKMMKEGRRFRQQ------DV 136

Query: 224 QKVAY-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            K+ +        D +   +       + R    +      +L   FS +G+        
Sbjct: 137 SKLEFELPEETVVDIQFKPQAKFRVRPVTRCTGALEGHSEAVLVVTFSPDGEALA---SG 193

Query: 279 DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               +I   D+ +   TE L          S++PD   +V  S ++G   ++       +
Sbjct: 194 GGDKEIRIWDVYTLTPTEELKAHTSWVQVLSWAPDGKHLVSGS-KDGTIIVWSHDGMYGN 252

Query: 338 QKRISQDKEASYFDP-VWSPQGDLIA---FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            K       +SY     W P    I    F   S +          G Q  L    + + 
Sbjct: 253 FKGKRHKAHSSYLSHISWEPLHRNIDCNRFVSASKDTTLKVWHNVTGVQFSLSGHQACVT 312

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
              W   G   I+S  +  D    ++    NG    ++   A+     WV F+
Sbjct: 313 CVKWG--GEGFIYSSSQ--DRTVIVWDAS-NGTPRHILRGHAH-----WVNFV 355


>gi|255647114|gb|ACU24025.1| unknown [Glycine max]
          Length = 334

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 72/183 (39%), Gaps = 15/183 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +++S +SG + +S+ + D      + +   R +    P  + +QQ + +A   +   +++
Sbjct: 127 INDSFMSGSLDHSVRIWDLRVNACQGILHLRGR----PAVAYDQQGLVFAVAMEGGAIKL 182

Query: 240 YLMDTRIDRA--PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-- 295
           +   +          +G   + +   +FS++GK  L++   +   +IY +D         
Sbjct: 183 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNN---NIYVLDAYGGEKRCG 239

Query: 296 -RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             L  +    I A+++PD   +V  S   G   + V      ++               W
Sbjct: 240 FSLEPSPGTPIEATFTPDGKYMVAGS---GSGTMQVWSIETKNEVACWTSHIGVPSCLKW 296

Query: 355 SPQ 357
           +P+
Sbjct: 297 APR 299


>gi|195382669|ref|XP_002050052.1| GJ21922 [Drosophila virilis]
 gi|194144849|gb|EDW61245.1| GJ21922 [Drosophila virilis]
          Length = 952

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 70/225 (31%), Gaps = 22/225 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +                +    +SP+ Q +A    D +    V L +T+      
Sbjct: 374 QLLVWEWQSEQYIMKQQGHSSEMSCIAYSPDGQYIATGGEDSK----VKLWNTQSSFCFV 429

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-------FIN 304
                 S + A +FS N K+ L+S   D  +  + + ++       T+          ++
Sbjct: 430 TFSEHTSGVTAVQFSRN-KKFLVSSSLDGTVRAFDI-IRYRNFRTFTSPTPAQFACVAVD 487

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S        Q VF        ++Y+          +    E       +SP        
Sbjct: 488 YSGELVVAGGQDVF--------EIYLWSIKTGKLLEVISGHEGPVASIAFSPVATSSTLI 539

Query: 365 KFS-GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             S  +   I    +  S+   +   S++    +SPSG  +  + 
Sbjct: 540 SGSWDKTVKIWNCLESNSEHETIDALSDVTCVAFSPSGEEVAVAT 584



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 45/110 (40%), Gaps = 6/110 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T++ N +  ++PD + ++      G  ++ V     +  + ++ +   +Y +   SP G 
Sbjct: 13  TIYRNGNLVFTPDGNSVI---SPVGN-RITVYDLKNNKSRTLALESRYNYTNIALSPDGS 68

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           L+      G+   I ++       R   +   +Q   +SP G     +R+
Sbjct: 69  LLIAVNEQGDAHLISMVSC-TVIHRHKFQTG-VQCINFSPDGAYFAVARE 116


>gi|307592136|ref|YP_003899727.1| WD40 repeat-containing protein [Cyanothece sp. PCC 7822]
 gi|306985781|gb|ADN17661.1| WD40 repeat, subgroup [Cyanothece sp. PCC 7822]
          Length = 1246

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/322 (15%), Positives = 112/322 (34%), Gaps = 50/322 (15%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS----ITGEKGDFNSRILFVSES 183
            +LWDV   + +          + R   + +SD  +      +    GD   ++  ++++
Sbjct: 688 IKLWDVTTGRCL---------KTLRGHKNRVSDLAFSRDEQILVSGSGDGTIKLWDMNQN 738

Query: 184 V-------VSGIIK--------NSLCVMDRDGANIRYLTPSRDQILF-----EPRFS--- 220
                    SGI K        N L +   +G   ++       I+       P FS   
Sbjct: 739 TIIQTLPMKSGIRKVIFHPSEENILIIAHENGTIQQWDLAENKCIMHILAHSGPIFSLVL 798

Query: 221 -PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
             + Q +   + D      +   +    ++ K +      IL   FS +  + L S   D
Sbjct: 799 SHDYQTLVSGSGD----FTIKFWNINSGKSLKVLSGHTGAILDLAFS-DESKILASASDD 853

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + + ++  D      + L        S  +S D+  ++  S+      + + +    +  
Sbjct: 854 KTIRLWHFD-TWENFQTLMGHTGKVQSIVFSQDNQILISGSN---DRTVKLWEIQNGNCA 909

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                   S+    ++P   ++A +  +  +  +  +      + L   DS ++A  +SP
Sbjct: 910 LTLSGYTNSHTSIAFNPNAQILA-SGANDGRLRLWWVTSGQCFKTLKGHDSQIEALAFSP 968

Query: 400 SGRSLIFSRKKDGDTGSKLYSI 421
           +G+ L      D +   K++ I
Sbjct: 969 NGQILA---SGDANGMIKIWDI 987



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 73/213 (34%), Gaps = 17/213 (7%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG     L +               D  +    FSPN Q +A  + D   +++++  D +
Sbjct: 933  SGANDGRLRLWWVTSGQCFKTLKGHDSQIEALAFSPNGQILA--SGDANGMIKIW--DIK 988

Query: 246  IDRAPKRIGNFR----SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                 + +  +     + +    FS +    L S   D  + I+ V L         ++ 
Sbjct: 989  TYECLQNLSGYPDEHTNTVWMITFSDD-NLILASASADCTVKIWEV-LSGECLNTFKHSS 1046

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +  S + SPD   ++  S  +G   L+    N   + +  +  +   F  V+S     +
Sbjct: 1047 GV-WSVAISPDRETLI-SSCHDGTVSLW--NLNSGKKIKTLKVHKGQVFTLVFSQDKKTL 1102

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                 +G    + ++     +    ++  + + 
Sbjct: 1103 I---SAGNDSTVKLLDAKTGKCIKSIKGFDDEV 1132


>gi|296122648|ref|YP_003630426.1| hypothetical protein Plim_2401 [Planctomyces limnophilus DSM 3776]
 gi|296014988|gb|ADG68227.1| WD-40 repeat protein [Planctomyces limnophilus DSM 3776]
          Length = 651

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 62/188 (32%), Gaps = 27/188 (14%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSV---DLQS-NATERLTNTLFIN--ISASYSPDS 313
           +L+  FS +G+   I+  K       S+    L S  +    T  + ++   +  +SPD 
Sbjct: 378 VLSLSFSPDGQTLAIASGKPGRWGAISIAPWPLSSATSPTYRTIAMTVDEATAVRFSPDG 437

Query: 314 SQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +       G ++ +   +     + R+S+D        VW+P    +           
Sbjct: 438 KWLA----TGGTDRAIRWYERQSLIEYRLSEDHSDWITALVWTPDSQRLLSASRDKT--- 490

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-----LYSIDLNGRN 427
           I V         L                  ++   +K   + ++     ++SI  +G+ 
Sbjct: 491 IKVASARTGNIELTFSSHTSSI-------SDVVCLSEKQAASIAQEAQLLIWSI-ADGKV 542

Query: 428 ETLINTPA 435
              +  PA
Sbjct: 543 VQKVKLPA 550



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 40/108 (37%), Gaps = 8/108 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRV----YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            FSP+ Q +A A+        +    + + +      + I        A RFS +GK   
Sbjct: 382 SFSPDGQTLAIASGKPGRWGAISIAPWPLSSATSPTYRTIAMTVDEATAVRFSPDGKWLA 441

Query: 274 ISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFES 320
                     I   + QS    RL+ +      +  ++PDS +++  S
Sbjct: 442 ---TGGTDRAIRWYERQSLIEYRLSEDHSDWITALVWTPDSQRLLSAS 486


>gi|303284577|ref|XP_003061579.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226456909|gb|EEH54209.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1741

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 12/117 (10%)

Query: 313  SSQIVFESDREG------KEQLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQGDLIA 362
                +F S R G      +        +G+   R    +S  +  +  +  WSP    +A
Sbjct: 955  GFDALFTSSRAGLGADSDQPAPPPPPGDGTGIARPRNVMSGLRPRAAGEYAWSPDSAWLA 1014

Query: 363  FTKFSGEKFA-IGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            F      +F+ + V     +    + E+S N   PT++P G  L +      ++GS 
Sbjct: 1015 FVASDDTEFSSVYVWNVAENNVTRVTENSYNAAEPTFTPDGLFLYYLSDAAIESGSA 1071



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 264  RFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
             +S +          D E   +Y  ++  N   R+T   +     +++PD   + + SD
Sbjct: 1005 AWSPDSAWLAFVASDDTEFSSVYVWNVAENNVTRVTENSYNAAEPTFTPDGLFLYYLSD 1063



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 38/111 (34%), Gaps = 5/111 (4%)

Query: 168  GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG---ANIRYLTPS-RDQILFEPRFSPNQ 223
               G F++        + +   + +      DG   A  R +    R +   E  +SP+ 
Sbjct: 951  PPSGGFDALFTSSRAGLGADSDQPAPPPPPGDGTGIARPRNVMSGLRPRAAGEYAWSPDS 1010

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
              +A+   DD +   VY+ +   +    R+         P F+ +G     
Sbjct: 1011 AWLAFVASDDTEFSSVYVWNVAEN-NVTRVTENSYNAAEPTFTPDGLFLYY 1060



 Score = 43.1 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 11/99 (11%), Positives = 34/99 (34%), Gaps = 16/99 (16%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISA------SYSP---------DSSQIVFESDREGK 325
             +++ V  +     R++++   + S        +SP         D   I + +     
Sbjct: 294 ERNVWVVSAKGGNAVRVSSSDAHDNSPKARPCLHWSPYGRVGVLSDDGGTIAYVAASSDG 353

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +++ + + G    R++     +     W+  G+ +   
Sbjct: 354 HEVFTVPTAGGTLTRVTYGT-GAVKLEGWTRDGNGLIVV 391



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 37/108 (34%), Gaps = 19/108 (17%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-----WSP---------QG 358
            + + F S+R     ++V+ + G +  R+S                WSP          G
Sbjct: 286 GALLTFISER----NVWVVSAKGGNAVRVSSSDAHDNSPKARPCLHWSPYGRVGVLSDDG 341

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLI 405
             IA+   S +   +  +   G    R+      ++   W+  G  LI
Sbjct: 342 GTIAYVAASSDGHEVFTVPTAGGTLTRVTYGTGAVKLEGWTRDGNGLI 389


>gi|224538723|ref|ZP_03679262.1| hypothetical protein BACCELL_03617 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519665|gb|EEF88770.1| hypothetical protein BACCELL_03617 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 364

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 17/191 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALIS 275
           FSP+++ +    +  + ILR  +    I   P            PR   FS NGK A + 
Sbjct: 172 FSPDEKYIFATDFSADRILRFVIHPKSIIPHPSAEAIDVDPNSGPRHLTFSPNGKYAYLI 231

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINI-------SASYSPDSSQIVFESDR--EGKE 326
            +    +  +S  L     +    T+  +            SPD   + + S+R      
Sbjct: 232 SELSGNITAFSY-LDGKLEK--IQTIAADTLRARGSADIHLSPDGKYL-YASNRLKGDGL 287

Query: 327 QLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            ++ +        ++       +  + + +P G  +           +            
Sbjct: 288 AIFEVNPETGMLAKVGYQLTGIHPRNFIITPNGKYLLAACRDSHVIQVFQRDPVTGLLSD 347

Query: 386 LVEDSNLQAPT 396
             +D ++  P 
Sbjct: 348 THQDISIDKPV 358



 Score = 43.1 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 89/234 (38%), Gaps = 33/234 (14%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRF---SSNGKRALISVQKDEAM--- 282
           TY D +   +Y    R ++      +  S+ +L P +   S +G+      + ++A    
Sbjct: 30  TYTDGNSKGIYTF--RFNQETGLATSLSSIEVLNPSYLIPSEDGRFVYAVSEMNDATAAL 87

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRI 341
           + +S D ++     L     +     Y   + + V  ++   G   ++ ++ NGS  + +
Sbjct: 88  NAFSFDKETGKLSLLNRQPTMGADPCYVATNGKEVLTANYSGGSMSIFPLKKNGS-LEPV 146

Query: 342 SQDKEASYFDP-------------VWSPQGDLIAFTKFSGEKFAIGVMKKDG-----SQE 383
               E S   P             V+SP    I  T FS ++    V+         S E
Sbjct: 147 DTLFEGSTGGPDAERQATPHVHCTVFSPDEKYIFATDFSADRILRFVIHPKSIIPHPSAE 206

Query: 384 RLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            + V+  S  +  T+SP+G+      +  G+  +  Y   L+G+ E +    A 
Sbjct: 207 AIDVDPNSGPRHLTFSPNGKYAYLISELSGNITAFSY---LDGKLEKIQTIAAD 257


>gi|242221952|ref|XP_002476713.1| predicted protein [Postia placenta Mad-698-R]
 gi|220724003|gb|EED78081.1| predicted protein [Postia placenta Mad-698-R]
          Length = 160

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 52/159 (32%), Gaps = 13/159 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A  ++D      + + +           +    I    FS + K+   S  
Sbjct: 8   AFSPDSSLLASGSHDR----SIIMWNVFAGEKTVAFDSHDGFIDTLAFSPDSKKLA-SGS 62

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL--YVMQSNG 335
            D  + I+ V+              + +  ++SPD +Q+       G       V  +  
Sbjct: 63  VDFIVRIWHVE-SGRQQSLCKAHNALVMVVTFSPDGTQLA-----SGSADCDTRVWDAET 116

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             +  + +  +   +   + P G  ++     G K  + 
Sbjct: 117 GVEICVLKGHQGVLYSVQFWPDGRRLSAASDDGIKRGLA 155



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 8/137 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    S+ + +           S D  +    FSP+ +K+A  + D      V +    
Sbjct: 18  SGSHDRSIIMWNVFAGEKTVAFDSHDGFIDTLAFSPDSKKLASGSVD----FIVRIWHVE 73

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
             R         ++++   FS +G +   S   D    ++  D ++      L     + 
Sbjct: 74  SGRQQSLCKAHNALVMVVTFSPDGTQLA-SGSADCDTRVW--DAETGVEICVLKGHQGVL 130

Query: 305 ISASYSPDSSQIVFESD 321
            S  + PD  ++   SD
Sbjct: 131 YSVQFWPDGRRLSAASD 147



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 52/150 (34%), Gaps = 10/150 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +    L S   D ++ +++V          ++  FI+  A +SPDS ++   S   
Sbjct: 8   AFSPD-SSLLASGSHDRSIIMWNVFAGEKTVAFDSHDGFIDTLA-FSPDSKKLASGSV-- 63

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + +       Q+ + +   A      +SP G  +A      +     V   +   E
Sbjct: 64  -DFIVRIWHVESGRQQSLCKAHNALVMVVTFSPDGTQLASGSADCDT---RVWDAETGVE 119

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              L      L +  + P GR L  +    
Sbjct: 120 ICVLKGHQGVLYSVQFWPDGRRLSAASDDG 149



 Score = 37.3 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 39/108 (36%), Gaps = 6/108 (5%)

Query: 167 TGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                 F   + F  +S    SG +   + +   +    + L  + + ++    FSP+  
Sbjct: 39  FDSHDGFIDTLAFSPDSKKLASGSVDFIVRIWHVESGRQQSLCKAHNALVMVVTFSPDGT 98

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           ++A  + D        + D         +   + ++ + +F  +G+R 
Sbjct: 99  QLASGSAD----CDTRVWDAETGVEICVLKGHQGVLYSVQFWPDGRRL 142


>gi|218184699|gb|EEC67126.1| hypothetical protein OsI_33942 [Oryza sativa Indica Group]
          Length = 533

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 82/205 (40%), Gaps = 12/205 (5%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    +  ++  RFS +   +A ++ D   I+     D  + +    +G  ++ I    
Sbjct: 223 QILCGHNNEVWFVRFSNDGNYLASSSSDCTAIIWKVEEDDTLTKKHCLVG-HKNPISFVA 281

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESD- 321
           +S N  R L++    E++ ++  ++ +     +  ++   I  S ++ P+S +IV  S  
Sbjct: 282 WSPN-DRMLLTCGNGESVKLW--NIATGECSLKFSSSVGHIINSCAWFPNSEKIVCASCE 338

Query: 322 -REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                ++++     G + +    D+     D   +P    +     +     I + +   
Sbjct: 339 PESSPKRIFTCDLEGQELESWVGDRIPKVSDIAVTPDSKHLICVCSN----EIWIRELPK 394

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI 405
            QE  + E   + + + S  G+SLI
Sbjct: 395 GQEWRIREQQTISSLSLSGDGQSLI 419


>gi|73996415|ref|XP_849797.1| PREDICTED: similar to achalasia, adrenocortical insufficiency,
           alacrimia (Allgrove, triple-A) [Canis familiaris]
          Length = 591

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 17/198 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+  K A A  D  D +RVY  ++ I   P      +  + A  +       L    
Sbjct: 203 AWHPHTNKFAVALLD--DSIRVYNANSTI--VPSLKHRLQRNVAALAWKPLSASVLAVAC 258

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLY 329
           +   + I+++D  S +T       ++          S +++P   +++  S  +    + 
Sbjct: 259 QT-CILIWTLDPTSLSTRPSSGCAQVLAHPGHAPVTSLAWAPSGGRLLSASPVD--AAIL 315

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V +        +         + +WSP G  +  T  S   F +   +     ER     
Sbjct: 316 VWEVATETCVPLPWFGGGGVTNLLWSPDGSKVLATTPSA-VFGVWEAQMWT-CERWPTLS 373

Query: 390 SNLQAPTWSPSGRSLIFS 407
              Q   WSP G  L+F+
Sbjct: 374 GRCQTGCWSPDGNRLLFT 391


>gi|302530889|ref|ZP_07283231.1| peptide hydrolase [Streptomyces sp. AA4]
 gi|302439784|gb|EFL11600.1| peptide hydrolase [Streptomyces sp. AA4]
          Length = 603

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 72/210 (34%), Gaps = 12/210 (5%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSP---NQQKVAYA 229
           +  +L +S S        +L V+  DG          +    +   FSP   +Q+ +   
Sbjct: 168 DESLLAISHSEHGDSRHPALRVLSTDGFTTVAEKWDGEGKGLQALEFSPLPGDQRLL--V 225

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            ++      + + D + D   + + +    ++A  +  + +  L+    +    +Y  DL
Sbjct: 226 LHERRGREELLVWDVQADTETELLIDLPGEVVA-DWYPDARALLVVHFHEARSSLYRYDL 284

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +     +         A   PD +     S       +    ++G+D   ++   E   
Sbjct: 285 DTGELSAVDTPAGRIGGAGVRPDGTIEYSWSSAAEPAAVRARAADGTDSVLLTPPGE--- 341

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             P  SP  D  AF +  G +    V + +
Sbjct: 342 RAPGSSPVTD--AFVEGVGGRIHALVSRPE 369



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 54/310 (17%), Positives = 99/310 (31%), Gaps = 24/310 (7%)

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
            +  + F    A  R +A   +  I    +  +   ++    V  S  SG+ +       
Sbjct: 1   MVPDRLFDDPEAEKRWLARFHAPRI----SVPEWARDAPDANVYVSNGSGVWEVYAWDRA 56

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D    R        +   P  SP+   + +    D D    +        +   +    
Sbjct: 57  TDSHR-RVTNRPNGTLHATP--SPDGTAIWWFDDTDGDEFGSWRSQPFDGDSSAAVKALP 113

Query: 258 S-MILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                 P     G R + +     D +     +D ++    +  +   I   AS S D S
Sbjct: 114 DIHDGYPAGLEIGHRVIAAGVSTDDGSELFAKIDGETTRFYQHADDAGI---ASMSRDES 170

Query: 315 QIVFESDREG---KEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSP---QGDLIAFTKFS 367
            +       G      L V+ ++G        D E        +SP      L+   +  
Sbjct: 171 LLAISHSEHGDSRHPALRVLSTDGFTTVAEKWDGEGKGLQALEFSPLPGDQRLLVLHERR 230

Query: 368 G-EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           G E+  +  ++ D   E LL++        W P  R+L+     +    S LY  DL+  
Sbjct: 231 GREELLVWDVQADTETE-LLIDLPGEVVADWYPDARALLVVHFHEAR--SSLYRYDLDTG 287

Query: 427 NETLINTPAY 436
             + ++TPA 
Sbjct: 288 ELSAVDTPAG 297


>gi|224104099|ref|XP_002313318.1| predicted protein [Populus trichocarpa]
 gi|222849726|gb|EEE87273.1| predicted protein [Populus trichocarpa]
          Length = 414

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 47/127 (37%), Gaps = 13/127 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + +    FSP+ +++A  + D      V L D             ++ +L   +S +
Sbjct: 104 GHAEAVLSVAFSPDGRQLASGSGDT----TVRLWDLNTQTPMFTCTGHKNWVLCIAWSPD 159

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSP---DSSQIVFES-DR 322
           GK  + S  K   +  +  D Q+      +L          S+ P   ++    F S  +
Sbjct: 160 GKHLV-SGSKAGELQCW--DPQTGKPSGNQLVGHKKWITGISWEPVHLNAPCRRFVSASK 216

Query: 323 EGKEQLY 329
           +G  +++
Sbjct: 217 DGDARIW 223



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 3/84 (3%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           ++R    I      +L+  FS +G++   S   D  + ++ ++ Q+      T      +
Sbjct: 95  VNRCSATIAGHAEAVLSVAFSPDGRQLA-SGSGDTTVRLWDLNTQTPMFT-CTGHKNWVL 152

Query: 306 SASYSPDSSQIVFESDREGKEQLY 329
             ++SPD   +V  S + G+ Q +
Sbjct: 153 CIAWSPDGKHLVSGS-KAGELQCW 175



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 13/122 (10%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD  Q+   S   G   + +   N           +       WSP G  +     +
Sbjct: 113 AFSPDGRQLASGS---GDTTVRLWDLNTQTPMFTCTGHKNWVLCIAWSPDGKHLVSGSKA 169

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTW------SPSGRSLIFSRKKDGDTGSKLYSI 421
           GE           S  +L+     +   +W      +P  R +  S  KDGD  ++++ I
Sbjct: 170 GELQCWDPQTGKPSGNQLVGHKKWITGISWEPVHLNAPCRRFV--SASKDGD--ARIWDI 225

Query: 422 DL 423
            L
Sbjct: 226 SL 227


>gi|163846364|ref|YP_001634408.1| peptidoglycan binding domain-containing protein [Chloroflexus
           aurantiacus J-10-fl]
 gi|222524129|ref|YP_002568600.1| peptidoglycan-binding domain 1 protein [Chloroflexus sp. Y-400-fl]
 gi|163667653|gb|ABY34019.1| Peptidoglycan-binding domain 1 protein [Chloroflexus aurantiacus
           J-10-fl]
 gi|222448008|gb|ACM52274.1| Peptidoglycan-binding domain 1 protein [Chloroflexus sp. Y-400-fl]
          Length = 484

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 80/239 (33%), Gaps = 46/239 (19%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRI------------DRAPKRIGNFRSMILAPRFSSN 268
           P+ Q++   TY+ + +  + +                 D   +R+      I  PR S +
Sbjct: 83  PDGQRLTQITYEPQPVRDMSVAANGTLVYLTGNDLVALDGNGRRVIFSEQAITNPRISPD 142

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-REGKEQ 327
           G+R +  +                    L N          SP     V+ S    G+ +
Sbjct: 143 GQRIVYHLAN---------PAPG-----LINGRAD------SPAG---VYLSQITGGRPE 179

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-----GVMKKDGSQ 382
           L +      +   + ++    Y    WSP GD +        +  I      ++  DG  
Sbjct: 180 LVIADDPVPETPDM-ENPAWRYIPVAWSPTGDRLLLYAVMQPEIGIPGGEAVIIGPDG-- 236

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNETLINTPAYASDP 440
            +++   S  +   WS  GR L  +    G D    LY I+ +  +ET + +    + P
Sbjct: 237 -QIVRAFSCCEEELWSVDGRDLAVAGGGPGPDIRFGLYLINADDGSETALLSADETTIP 294



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 48/132 (36%), Gaps = 22/132 (16%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +Q+  ++ +G    +I+ + +    D   +  G L+  T          ++  DG+  R
Sbjct: 75  NDQVMRLEPDGQRLTQITYEPQ-PVRDMSVAANGTLVYLTGND-------LVALDGNGRR 126

Query: 385 LLVEDSNLQAPTWSPSGRSLIF--------SRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           ++  +  +  P  SP G+ +++              D+ + +Y   + G    L+     
Sbjct: 127 VIFSEQAITNPRISPDGQRIVYHLANPAPGLINGRADSPAGVYLSQITGGRPELVIADDP 186

Query: 437 ASD------PQW 442
             +      P W
Sbjct: 187 VPETPDMENPAW 198



 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 30/207 (14%), Positives = 60/207 (28%), Gaps = 39/207 (18%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA---------TYDDEDILRVYLMDTR 245
           ++  DG   R +    +Q +  PR SP+ Q++ Y              +    VYL    
Sbjct: 117 LVALDGNGRRVIF--SEQAITNPRISPDGQRIVYHLANPAPGLINGRADSPAGVYLSQIT 174

Query: 246 IDRAPKRIGNFR-----------SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             R    I +                +   +S  G R L+      A+    + +     
Sbjct: 175 GGRPELVIADDPVPETPDMENPAWRYIPVAWSPTGDRLLLY-----AVMQPEIGIPGGEA 229

Query: 295 E------RLTNTLFINISASYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDK 345
                  ++           +S D   +       G   +  LY++ ++   +  +    
Sbjct: 230 VIIGPDGQIVRAFSCCEEELWSVDGRDLAVAGGGPGPDIRFGLYLINADDGSETALLSAD 289

Query: 346 EAS---YFDPVWSPQGDLIAFTKFSGE 369
           E +      P     G + AF +    
Sbjct: 290 ETTIPLVRAPQRLADGFVYAFVEMVPT 316


>gi|213406349|ref|XP_002173946.1| notchless-like protein [Schizosaccharomyces japonicus yFS275]
 gi|212001993|gb|EEB07653.1| notchless-like protein [Schizosaccharomyces japonicus yFS275]
          Length = 504

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 48/115 (41%), Gaps = 14/115 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--- 263
                +++    FSP+ + +A A++D+        +     +  K I   R  + +    
Sbjct: 387 MHGHQKVVNHASFSPDGRYIATASFDNS-------LRLWDGKTGKFIATLRGHVASVYQC 439

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIV 317
            +SS+  R L+S  +D  + ++  D+++   +  L        +  ++PD  ++ 
Sbjct: 440 AWSSD-SRLLVSSSQDTTLKVW--DVRTKQLKFDLPGHEDQVFAVDWAPDGQRVA 491



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 70/188 (37%), Gaps = 16/188 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRF-----SPNQQKVAYATYDDEDILRVYLMDTRID 247
           L     D  N +  +P  +++  + R+     S  ++++  A+   +D+  +     +  
Sbjct: 325 LRTGAYDHTNFKPKSPEEERVRAKERYEEVIKSQGEERLVSAS---DDLQLMLWNPLKST 381

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINIS 306
           +   ++   + ++    FS +G+    +   D ++ ++  D ++      L   +     
Sbjct: 382 KPIAKMHGHQKVVNHASFSPDGRYIA-TASFDNSLRLW--DGKTGKFIATLRGHVASVYQ 438

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++S DS  +V  S       L V        K      E   F   W+P G  +A +  
Sbjct: 439 CAWSSDSRLLVSSSQ---DTTLKVWDVRTKQLKFDLPGHEDQVFAVDWAPDGQRVA-SGG 494

Query: 367 SGEKFAIG 374
           + +K  I 
Sbjct: 495 ADKKVRIW 502



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 8/139 (5%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+  L+S   D  + +++    +    ++     +   AS+SPD   I   S       L
Sbjct: 359 GEERLVSASDDLQLMLWNPLKSTKPIAKMHGHQKVVNHASFSPDGRYIATASF---DNSL 415

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LL 386
            +            +   AS +   WS    L+  +        + V      Q +  L 
Sbjct: 416 RLWDGKTGKFIATLRGHVASVYQCAWSSDSRLLVSSSQDTT---LKVWDVRTKQLKFDLP 472

Query: 387 VEDSNLQAPTWSPSGRSLI 405
             +  + A  W+P G+ + 
Sbjct: 473 GHEDQVFAVDWAPDGQRVA 491


>gi|182765471|ref|NP_001116833.1| transcription initiation factor TFIID subunit 5 [Xenopus laevis]
 gi|171846698|gb|AAI61681.1| LOC100036804 protein [Xenopus laevis]
          Length = 783

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 63/191 (32%), Gaps = 29/191 (15%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-- 298
           +MD +     K +      + A  FS +    L S  +D  + ++S+       +  T  
Sbjct: 510 IMDEKSSSEMKILYGHSGPVYATSFSPDRNYLL-SSSEDGTVRLWSL-------QTFTCL 561

Query: 299 ------NTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFD 351
                 N    +    +SP      F S   G +++  + + +     RI     A    
Sbjct: 562 VAYKGHNYPVWDTQ--FSPYG--YYFVS--GGHDRVARLWATDHYQPLRIFAGHLADVIC 615

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKK 410
             + P  + IA            V    G+  R+       + A  ++P+G+   F    
Sbjct: 616 TRFHPNSNYIATGSTDRTVRMWDV--LSGNCVRIFTGHKGPIHALAFTPNGK---FLSSG 670

Query: 411 DGDTGSKLYSI 421
             D+   L+ I
Sbjct: 671 ASDSRILLWDI 681



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 83/268 (30%), Gaps = 17/268 (6%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 455 GLTAVDITDDSSLIAGGFADSTVRVWSLTPKKLRSVKSASDLSIIDKESDDVLERIMDEK 514

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            ++   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 515 SSSEMKILYGHSGPVYATSFSPDRNYLLSSSED--GTVRLWSLQTFTCLVAYKGHNYP-- 570

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +   +FS  G    +S   D    +++ D            L   I   + P+S+ I   
Sbjct: 571 VWDTQFSPYG-YYFVSGGHDRVARLWATDH-YQPLRIFAGHLADVICTRFHPNSNYIATG 628

Query: 320 S-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           S DR     + +      +  RI    +       ++P G    F         I +   
Sbjct: 629 STDRT----VRMWDVLSGNCVRIFTGHKGPIHALAFTPNGK---FLSSGASDSRILLWDI 681

Query: 379 DGSQER--LLVEDSNLQAPTWSPSGRSL 404
                   L    + + A  +S  G  L
Sbjct: 682 GHGLMVGELKGHTNTVYALRFSKDGEIL 709


>gi|83771976|dbj|BAE62106.1| unnamed protein product [Aspergillus oryzae]
          Length = 594

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 57/155 (36%), Gaps = 8/155 (5%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSP 311
              S++   +FS++GK   +    D A+ I  V   +            +   +   + P
Sbjct: 273 THDSIVNCVQFSNDGKYIAV-GCADGAVQIVEVSTGTQVARLQDEGYSHDCLCVRVRFLP 331

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D + ++  +  +G   + V    GS  +RI    E  +F    S  G LIAF++ +    
Sbjct: 332 D-NYLLLTAHSDGN--IRVWNYMGSLLRRIPCGSETGFFTLDLSATGHLIAFSERNKTVK 388

Query: 372 AIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLI 405
           A  +    G  Q   L    ++     SP    + 
Sbjct: 389 AWDLDAASGIRQLGTLHTADDVYIVAVSPDSGYIA 423



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 84/229 (36%), Gaps = 27/229 (11%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            D I+   +FS + + +A    D    +      T++ R      +   + +  RF  + 
Sbjct: 274 HDSIVNCVQFSNDGKYIAVGCADGAVQIVEVSTGTQVARLQDEGYSHDCLCVRVRFLPD- 332

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREG 324
              L++   D  + ++  +   +   R+     T    +++SA+       I F S+R  
Sbjct: 333 NYLLLTAHSDGNIRVW--NYMGSLLRRIPCGSETGFFTLDLSAT----GHLIAF-SERNK 385

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD----- 379
             + + + +    ++  +       +    SP    IA     G  +       D     
Sbjct: 386 TVKAWDLDAASGIRQLGTLHTADDVYIVAVSPDSGYIAAGCDDGMIYIWRADSLDPGTAS 445

Query: 380 ---GSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                 E++L     D N+ A +++P  RS+I       D  +KL++ID
Sbjct: 446 ASGTKIEKVLEFQAHDENVMALSFTPDCRSII---SGGMDGTAKLWNID 491


>gi|294941790|ref|XP_002783241.1| WD repeat domain containing protein [Perkinsus marinus ATCC 50983]
 gi|239895656|gb|EER15037.1| WD repeat domain containing protein [Perkinsus marinus ATCC 50983]
          Length = 590

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 71/254 (27%), Gaps = 48/254 (18%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   R         +   R+    Q +   +  ++  ++V+   +R      ++    + 
Sbjct: 97  GKEERRAQQKHAGSVTYLRWDHEGQLL--CSCGEDGTVKVW---SRTGMIRSQLAQVSTA 151

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISAS-------YSP 311
           +++  +S + +    +      +             +          +         +SP
Sbjct: 152 VVSAAWSPDSETIAFTCGPSMHLKTLV---AGRGLIQWKAVDNGSEGTPCGEVLCLDWSP 208

Query: 312 DSSQIVFESDREGKEQL-YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            +  IV      G E   Y +          S   E +     W+P G L+A     G  
Sbjct: 209 VTKLIV-----SGSEDCRYRIWQATGQLLYRSDLLEHAATAVQWTPSGKLLAV----GVS 259

Query: 371 FAIGVMKKDG---------SQERLLVEDSNLQAP--------TWSPSGRSLIFSRKKDGD 413
             I +    G           +  L +     +P         WSP G  LI      G 
Sbjct: 260 DMIKLCDATGWGHSHTNLSGLDHALYQQCGNTSPGACSPFALCWSPDGTQLI-----MGM 314

Query: 414 TGSKLYSIDLNGRN 427
               +   D+ GR 
Sbjct: 315 GDGSVLVADVIGRT 328



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 56/195 (28%), Gaps = 24/195 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA---TYDDEDILRVYLMDTRIDR 248
           ++ V  R G  IR         +    +SP+ + +A+    +   + ++    +      
Sbjct: 131 TVKVWSRTGM-IRSQLAQVSTAVVSAAWSPDSETIAFTCGPSMHLKTLVAGRGLIQWKAV 189

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFINIS 306
                G     +L   +S    + ++S  +D    I+          R  L       + 
Sbjct: 190 DNGSEGTPCGEVLCLDWSP-VTKLIVSGSEDCRYRIWQ--ATGQLLYRSDLLEHAATAVQ 246

Query: 307 ASYSPDSSQIVF-ESDR------EGKEQLYVMQSNGSDQKRISQDKEASYFDPV-----W 354
             ++P    +    SD        G    +    +G D     Q    S          W
Sbjct: 247 --WTPSGKLLAVGVSDMIKLCDATGWGHSHT-NLSGLDHALYQQCGNTSPGACSPFALCW 303

Query: 355 SPQGDLIAFTKFSGE 369
           SP G  +      G 
Sbjct: 304 SPDGTQLIMGMGDGS 318


>gi|242016915|ref|XP_002428940.1| WD-repeat protein, putative [Pediculus humanus corporis]
 gi|212513769|gb|EEB16202.1| WD-repeat protein, putative [Pediculus humanus corporis]
          Length = 321

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 63/189 (33%), Gaps = 12/189 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +   ++  +    + +      +  + +       L+  +S +GK    S  
Sbjct: 129 AFSPDDKYIISGSHFGK----INIYGVESKKQEQNLDTRGKFTLSIAYSPDGKYIA-SGA 183

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  ++I+  D+ S      L        S  +SPDS  ++  SD +G  +LY      +
Sbjct: 184 IDGIINIF--DVASAKLVHTLEGHALPIRSLCFSPDSQLLLTASD-DGHMKLY--DVQHA 238

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +         +      +SP       +  S     I  +               +    
Sbjct: 239 NVVDTLSGHASWVLSVAFSPHNTHFV-SSSSDHSVKIWELSTRSCIHTFSEHQDQVWGVK 297

Query: 397 WSPSGRSLI 405
           ++P G  ++
Sbjct: 298 YNPDGDKVV 306



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 76/247 (30%), Gaps = 19/247 (7%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +V    V   +K  + V D     + +        +     + +  K A ++ D      
Sbjct: 50  YVVTGGVDDCVK--VWVYDDKKLKLNHKLEGHSLGVVSVALNSDGSKCASSSMDS----T 103

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +++ D         I      I    FS + K   IS      ++IY V+ +    + L 
Sbjct: 104 LFMWDVVTGEKLGSIDVGPVDIWTVAFSPDDKYI-ISGSHFGKINIYGVESK-KQEQNLD 161

Query: 299 NTLFINISASYSPDSSQIVFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                 +S +YSPD   I       G     + +     +      +          +SP
Sbjct: 162 TRGKFTLSIAYSPDGKYIA-----SGAIDGIINIFDVASAKLVHTLEGHALPIRSLCFSP 216

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
              L+  T        +  ++     + L    S + +  +SP     + S     D   
Sbjct: 217 DSQLLL-TASDDGHMKLYDVQHANVVDTLSGHASWVLSVAFSPHNTHFVSSSS---DHSV 272

Query: 417 KLYSIDL 423
           K++ +  
Sbjct: 273 KIWELST 279



 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 58/160 (36%), Gaps = 8/160 (5%)

Query: 164 QSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +     +G F   I +  +   + SG I   + + D   A + +        +    FSP
Sbjct: 157 EQNLDTRGKFTLSIAYSPDGKYIASGAIDGIINIFDVASAKLVHTLEGHALPIRSLCFSP 216

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + Q +  A+ D      + L D +       +    S +L+  FS       +S   D +
Sbjct: 217 DSQLLLTASDDG----HMKLYDVQHANVVDTLSGHASWVLSVAFSP-HNTHFVSSSSDHS 271

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           + I+ +  +S      +          Y+PD  ++V  SD
Sbjct: 272 VKIWELSTRS-CIHTFSEHQDQVWGVKYNPDGDKVVSVSD 310


>gi|86130988|ref|ZP_01049587.1| prolyl oligopeptidase family protein [Dokdonia donghaensis MED134]
 gi|85818399|gb|EAQ39559.1| prolyl oligopeptidase family protein [Dokdonia donghaensis MED134]
          Length = 642

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 7/83 (8%)

Query: 355 SPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTW-SPSGRSLIFSRKK 410
           SP G+ +++  +    K  + +      +E LLVE     +++  W SP    +++S+ K
Sbjct: 50  SPDGNYLSYMKRREDGKRDLFLKNTTTQEELLLVEQQEDLIRSYFWASPD--RIVYSQDK 107

Query: 411 DGDTGSKLYSIDLNGR-NETLIN 432
            GD    L+ ++L+G  NE L  
Sbjct: 108 GGDENYHLFGVNLDGSGNEELTP 130



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 6/82 (7%)

Query: 310 SPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAFTKFS 367
           SPD + + +   R +GK  L++  +   ++  + + +E       W SP    I +++  
Sbjct: 50  SPDGNYLSYMKRREDGKRDLFLKNTTTQEELLLVEQQEDLIRSYFWASPD--RIVYSQDK 107

Query: 368 GE--KFAIGVMKKDGSQERLLV 387
           G    + +  +  DGS    L 
Sbjct: 108 GGDENYHLFGVNLDGSGNEELT 129



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGKRALISVQK 278
           SP+   ++Y    ++    ++L +T        +     +I +  + S +  R + S  K
Sbjct: 50  SPDGNYLSYMKRREDGKRDLFLKNTTTQEELLLVEQQEDLIRSYFWASPD--RIVYSQDK 107

Query: 279 DE--AMDIYSVDLQSNATERLT 298
                  ++ V+L  +  E LT
Sbjct: 108 GGDENYHLFGVNLDGSGNEELT 129


>gi|320169539|gb|EFW46438.1| pre-mRNA splicing factor prp17 [Capsaspora owczarzaki ATCC 30864]
          Length = 584

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 71/228 (31%), Gaps = 29/228 (12%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                ++ + +  F+ +  K   A+YD      V L DT   +   R  N + +    +F
Sbjct: 332 TYSGHEKAVRDVCFNNDGTKFLSASYDK----YVKLWDTETGQCISRFTN-KKVPYCVKF 386

Query: 266 SSN--GKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDR 322
           + +   +   I+   D    I + D+ S    +     L    S ++  ++ + V  SD 
Sbjct: 387 NPDEDKQHLFIAGCAD--RKIVTYDVNSGEVVQEYDRHLAAVNSITFIDENRRFVSTSD- 443

Query: 323 EGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK--- 378
              + + V   +   D K I+     S       P    +           I V      
Sbjct: 444 --DKSIRVWDWDTPVDIKYIADPGMHSMPAVAVHPNKKWMLMQSMDNT---INVYSTRDK 498

Query: 379 ----DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    R  +       P  SP G  +I      GD   KL   D
Sbjct: 499 FRAHKTKNFRGHLSAGYACQPDMSPDGSHVI-----SGDGEGKLCIWD 541


>gi|226228893|ref|YP_002762999.1| putative peptidase [Gemmatimonas aurantiaca T-27]
 gi|226092084|dbj|BAH40529.1| putative peptidase [Gemmatimonas aurantiaca T-27]
          Length = 687

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 6/100 (6%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            R +  +  +      SP GD +A+ +   +  A+ ++   G + R+LV  +  +   WS
Sbjct: 48  PRTAFLENRTLVAAELSPAGDAVAYLREQKDSRALWLLPAGGGEARMLVGSTQAEQIMWS 107

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             GR L F R         L  + ++G     +       
Sbjct: 108 RDGRWL-FVR-----APRVLTIVGIDGGTGVRVPLGGNER 141



 Score = 43.5 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 56/181 (30%), Gaps = 22/181 (12%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIV 317
           +A   S  G       ++ ++  ++ +         L   T    I     +S D   + 
Sbjct: 59  VAAELSPAGDAVAYLREQKDSRALWLLPAGGGEARMLVGSTQAEQI----MWSRDGRWLF 114

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-------GDLIAFTKFSGEK 370
             + R     L ++  +G    R+              P        G+ +A     GE+
Sbjct: 115 VRAPR----VLTIVGIDGGTGVRVPLGGNERRRVIKLDPSQPAAVLLGERVA--AGKGER 168

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           + +  M   G +  L  +   +    +   GR +  +R +       LY +  +G     
Sbjct: 169 WRVVRMDAHGKRTVLREDAHWIHDVAFDAQGRVVALTRFEG--AFDALYRVRGDGSIREA 226

Query: 431 I 431
           +
Sbjct: 227 L 227


>gi|301614415|ref|XP_002936677.1| PREDICTED: aladin-like [Xenopus (Silurana) tropicalis]
          Length = 519

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 66/222 (29%), Gaps = 19/222 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               D  L    + P+  K A A  D  D +R+Y   +     P      +  + +  + 
Sbjct: 147 LDWADSPLRAFAWHPHTNKFALALLD--DSIRIYTAGSPT--IPTLKHRLQKDVASMAWK 202

Query: 267 SNGKRALISVQKD------EAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFE 319
                 L    +             S    S   + L++       S  +SP    ++  
Sbjct: 203 PMCASVLAVACQSCVLVWHVDPTSLSTRPSSGCAQVLSHPGHSPVTSVCWSPKGGVLLSA 262

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S  +    + V          + +          WSP G  +     S   F +   +K 
Sbjct: 263 SPVD--TAMLVWDVPTESCIPLQRVGGGGVTFLSWSPDGSKVLAATPSC-VFRVWETQKW 319

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              ER        Q   WSP G  L+F+        S +YS+
Sbjct: 320 T-CERWPTLQGRCQTGCWSPDGSRLLFAV----KGESVIYSL 356



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 33/116 (28%), Gaps = 8/116 (6%)

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            + +    + +S    +      WSP+G ++           +  +  +       V   
Sbjct: 229 TRPSSGCAQVLSHPGHSPVTSVCWSPKGGVLLSASPVDTAMLVWDVPTESCIPLQRVGGG 288

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN--ETLINTPAYASDPQWVG 444
            +   +WSP G  ++        T S ++ +    +   E             W  
Sbjct: 289 GVTFLSWSPDGSKVL------AATPSCVFRVWETQKWTCERWPTLQGRCQTGCWSP 338



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 46/134 (34%), Gaps = 13/134 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+  KV  AT          + +T+     +     +       +S +G R L +V+
Sbjct: 294 SWSPDGSKVLAAT----PSCVFRVWETQKWTCERWPT-LQGRCQTGCWSPDGSRLLFAVK 348

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQ 332
            +  +      +    T+     +  + SA+   D S++VF +        G  Q     
Sbjct: 349 GESVIYSLCFSVSEGETQ---AGVGGSQSATVVADVSEVVFTTSAGEIRVGGDIQSMCWD 405

Query: 333 SNGSDQKRISQDKE 346
            +G     + +   
Sbjct: 406 PSGERLAVLLKGNP 419


>gi|292613638|ref|XP_002662016.1| PREDICTED: WD repeat and SOCS box-containing protein 2 [Danio
           rerio]
 gi|220673393|emb|CAX13671.1| novel protein similar to vertebrate WD repeat and SOCS
           box-containing 2 (WSB2) [Danio rerio]
          Length = 406

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 79/234 (33%), Gaps = 23/234 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP----KRIGNF 256
           A+   L  + D   +  RFSP+    A++       L  + + TR         ++I N 
Sbjct: 23  AHRPRLYGTPDCETWSARFSPDGSYFAWSMGFGVIKLLPWPLTTRDSAESCCSKEKILNC 82

Query: 257 RSMILAPRFSS--------------NGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTL 301
           R ++ A  F                  +  L +   + ++ ++ V   +   +  LT   
Sbjct: 83  RFLVWALAFGPCTSTRVDSAHQHRREHELLLAAGLHNGSIQVWLV--STGNLQFTLTGHQ 140

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  ++P+ S  +  + R+   +++ +   G+    + +      F    SP   +I
Sbjct: 141 APVRDLVFAPNGSLTLISASRDKTLRIWDLGKKGASPHVL-RGPNYWVFRCAVSPDSSVI 199

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDT 414
           A       K  +  ++     + L  + +  + +  +S  G  L  +       
Sbjct: 200 ASVCNLDSKVYLWSLRSYTFMKHLTYDHERTMASCDFSQDGALLAIASYHSNTG 253



 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 63/164 (38%), Gaps = 4/164 (2%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + +           +   ++ +    F+ NG   LIS  +D+ + I+ +  +  +   L
Sbjct: 121 SIQVWLVSTGNLQFTLTGHQAPVRDLVFAPNGSLTLISASRDKTLRIWDLGKKGASPHVL 180

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
               +     + SPDSS I    + + K  L+ ++ + +  K ++ D E +     +S  
Sbjct: 181 RGPNYWVFRCAVSPDSSVIASVCNLDSKVYLWSLR-SYTFMKHLTYDHERTMASCDFSQD 239

Query: 358 GDLIAFTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           G L+A   + S   + + +     +   LL    + +   +   
Sbjct: 240 GALLAIASYHSNTGWWLDLWDPYTAD--LLTRVQDCEVCAYRSD 281



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 63/185 (34%), Gaps = 21/185 (11%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-------A 293
           L + +    P+  G       + RFS +G     S+     + +    L +        +
Sbjct: 17  LAELKAAHRPRLYGTPDCETWSARFSPDGSYFAWSM-GFGVIKLLPWPLTTRDSAESCCS 75

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQ------------LYVMQSNGSDQKRI 341
            E++ N  F+  + ++ P +S  V  + +  +E             + V   +  + +  
Sbjct: 76  KEKILNCRFLVWALAFGPCTSTRVDSAHQHRREHELLLAAGLHNGSIQVWLVSTGNLQFT 135

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPS 400
               +A   D V++P G L   +    +   I  + K G+   +L   +        SP 
Sbjct: 136 LTGHQAPVRDLVFAPNGSLTLISASRDKTLRIWDLGKKGASPHVLRGPNYWVFRCAVSPD 195

Query: 401 GRSLI 405
              + 
Sbjct: 196 SSVIA 200


>gi|148694885|gb|EDL26832.1| RIKEN cDNA 1700123D08, isoform CRA_a [Mus musculus]
 gi|148694886|gb|EDL26833.1| RIKEN cDNA 1700123D08, isoform CRA_a [Mus musculus]
          Length = 271

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 71/209 (33%), Gaps = 29/209 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +  A+ D      VY+  T+  R   R+   R  + +  FS +G+    S  
Sbjct: 33  AFSPDGRTLLTASDDG----CVYVWGTKSGRLLWRLAGHRGPVKSCCFSPDGRLIA-SSS 87

Query: 278 KDEAMDIY---------SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            D ++ ++          +         L        S+ +SP S  +   S       +
Sbjct: 88  SDHSIRLWDVARSKCLHVLKESGRRVHLLVGHCDSIQSSDFSPTSDSLATGS---WDSTV 144

Query: 329 YVMQSNGSDQKRISQDKE---ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           ++     S       + E    +     +S  G L+A   +      I V K   +   L
Sbjct: 145 HIWDLRASTPVVSYHNLEGHTGNISCLCYSASG-LLASGSWDKT---ICVWKPTTNNLPL 200

Query: 386 LVEDSNLQAPT--WSPSGRSLI---FSRK 409
            ++   +   +  +SP    L    +SR 
Sbjct: 201 QLKGHTIWVNSLAFSPDELKLASAGYSRT 229



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 52/177 (29%), Gaps = 15/177 (8%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            + +           +  G     +    FS +G+  L +   D  + ++          
Sbjct: 5   PMNIRAPTRLAVGRVRFYGQHHGEVNCSAFSPDGRTLL-TASDDGCVYVWGT-KSGRLLW 62

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--------GSDQKRISQDKEA 347
           RL        S  +SPD   I   S  +   +L+ +  +           +  +      
Sbjct: 63  RLAGHRGPVKSCCFSPDGRLIA-SSSSDHSIRLWDVARSKCLHVLKESGRRVHLLVGHCD 121

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSG 401
           S     +SP  D +A   +      I  ++      S   L     N+    +S SG
Sbjct: 122 SIQSSDFSPTSDSLATGSWDSTV-HIWDLRASTPVVSYHNLEGHTGNISCLCYSASG 177



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 8/87 (9%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQA 394
            + R             +SP G  +      G    + V      +   RL      +++
Sbjct: 17  GRVRFYGQHHGEVNCSAFSPDGRTLLTASDDG---CVYVWGTKSGRLLWRLAGHRGPVKS 73

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +SP GR +  S     D   +L+ +
Sbjct: 74  CCFSPDGRLIASSSS---DHSIRLWDV 97



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 42/111 (37%), Gaps = 4/111 (3%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y ++ G  G+ +      S  + SG    ++CV      N+          +    FSP+
Sbjct: 158 YHNLEGHTGNISCLCYSASGLLASGSWDKTICVWKPTTNNLPLQLKGHTIWVNSLAFSPD 217

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           + K+A A Y       V + D    +  + +     +  A  F+ +GK  +
Sbjct: 218 ELKLASAGYSR----TVKVWDCLTGKCLETLKGMLDVAHACIFTPDGKLLV 264


>gi|147900923|ref|NP_001086055.1| WD repeat-containing protein 61 [Xenopus laevis]
 gi|82236443|sp|Q6GMD2|WDR61_XENLA RecName: Full=WD repeat-containing protein 61
 gi|49256488|gb|AAH74136.1| MGC81859 protein [Xenopus laevis]
          Length = 305

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/220 (18%), Positives = 79/220 (35%), Gaps = 34/220 (15%)

Query: 102 DWNSLGAQV-LVTGRVIKEGK----DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W   G Q+ +V+  V   G       L    RLWD++  KQI  +   + P     +A 
Sbjct: 57  QWALEGHQLGVVSVDVSPSGNIMASSSLDAHIRLWDLESGKQI--RSIDAGPVDAWSVA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D                   S+ + +G     + +   +     Y   +R + +  
Sbjct: 114 -FSPD-------------------SQHLATGSHVGKVNIFGVETGKKEYSLDTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS++  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSTD-SQLLVTA 208

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             D  + IY V   S A   L+      ++ ++SPD +  
Sbjct: 209 SDDGYIKIYDVQHASLAAT-LSGHGSWVLNVAFSPDDAHF 247



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 54/165 (32%), Gaps = 9/165 (5%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + D +         +     +   FSP+ Q +A  ++  +    V +      +    
Sbjct: 88  IRLWDLESGKQIRSIDAGPVDAWSVAFSPDSQHLATGSHVGK----VNIFGVETGKKEYS 143

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      IL+  +S +GK    S   D  ++I+ +         L        S ++S D
Sbjct: 144 LDTRGKFILSIAYSPDGKYLA-SGAIDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSTD 201

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           S  +V  SD      + +     +          +   +  +SP 
Sbjct: 202 SQLLVTASD---DGYIKIYDVQHASLAATLSGHGSWVLNVAFSPD 243


>gi|71278232|ref|YP_271596.1| hypothetical protein CPS_4957 [Colwellia psychrerythraea 34H]
 gi|71143972|gb|AAZ24445.1| conserved hypothetical protein [Colwellia psychrerythraea 34H]
          Length = 693

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 96/273 (35%), Gaps = 39/273 (14%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-ATYDDEDILRVYLMDT 244
            G     L ++D  G    Y+T   +  +   ++S +   + + A  + ++   +Y +  
Sbjct: 71  DGKNWGELYLVDDKGVERPYIT--GEVNVKNIQWSADGSLIYFLAKMNHDEFTTLYQIPA 128

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +A K +    + I +   SS+ K+  I  +K           +  + ++LT+  F  
Sbjct: 129 NGGQAQKTVALKETNISSYALSSDNKKIAILAKK----------AKDESVKKLTDLGF-- 176

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLI- 361
                       VFE +    + LYV     SDQ     + D +    D  +SP G  + 
Sbjct: 177 ---------KAEVFE-EELTNQFLYVTDLTQSDQAITPEAWDIKGYVSDVHFSPTGKDLL 226

Query: 362 ------AFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIF--SRKKDG 412
                 A       K    ++       +     +  L A  +S  G+ +    ++ K  
Sbjct: 227 IKTQPTALIDDKYMKSQWHIVDIAKKAVKTSFATEGKLGAAEFSYDGKYVALHGAQDKHD 286

Query: 413 DTGSKLYSIDLNGRNET--LINTPAYASDPQWV 443
               +L+  ++     +  L N   + SD +W 
Sbjct: 287 PANGRLFIANVASGKISNWLPNFKGHVSDFEWS 319



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 10/85 (11%)

Query: 355 SPQGDLIAFTKF---------SGEKF-AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           SP G+ +A+T+           G+ +  + ++   G +   +  + N++   WS  G  +
Sbjct: 50  SPSGEYVAYTRSVPREIYVEKDGKNWGELYLVDDKGVERPYITGEVNVKNIQWSADGSLI 109

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNET 429
            F  K + D  + LY I  NG    
Sbjct: 110 YFLAKMNHDEFTTLYQIPANGGQAQ 134



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 64/173 (36%), Gaps = 40/173 (23%)

Query: 310 SPDSSQIVFES--------DREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           SP    + +          +++GK   +LY++   G ++  I+   E +  +  WS  G 
Sbjct: 50  SPSGEYVAYTRSVPREIYVEKDGKNWGELYLVDDKGVERPYIT--GEVNVKNIQWSADGS 107

Query: 360 LIAF-TKFSGEKF-AIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGD-- 413
           LI F  K + ++F  +  +  +G Q +  V  +++N+ +   S   + +    KK  D  
Sbjct: 108 LIYFLAKMNHDEFTTLYQIPANGGQAQKTVALKETNISSYALSSDNKKIAILAKKAKDES 167

Query: 414 ------------------TGSKLYSIDLNGRNETLINTP----AYASDPQWVG 444
                             T   LY  DL   ++ +         Y SD  +  
Sbjct: 168 VKKLTDLGFKAEVFEEELTNQFLYVTDLTQSDQAITPEAWDIKGYVSDVHFSP 220



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 37/302 (12%), Positives = 98/302 (32%), Gaps = 38/302 (12%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +   +   +  +++    +       +L  +  +G   +     ++  +     S + +K
Sbjct: 97  VKNIQWSADGSLIYFLAKMNHDEF-TTLYQIPANGGQAQKTVALKETNISSYALSSDNKK 155

Query: 226 VAYATYDDED-------------------ILRVYLMDTRIDRAPKRIG----NFRSMILA 262
           +A      +D                   +   +L  T + ++ + I     + +  +  
Sbjct: 156 IAILAKKAKDESVKKLTDLGFKAEVFEEELTNQFLYVTDLTQSDQAITPEAWDIKGYVSD 215

Query: 263 PRFSSNGKRALISVQ-------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             FS  GK  LI  Q       K      + VD+   A +    T     +A +S D   
Sbjct: 216 VHFSPTGKDLLIKTQPTALIDDKYMKSQWHIVDIAKKAVKTSFATEGKLGAAEFSYDGKY 275

Query: 316 IVFESDRE----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +     ++       +L++             + +    D  WS + + + F    G + 
Sbjct: 276 VALHGAQDKHDPANGRLFIANVASGKISNWLPNFKGHVSDFEWSNKRNELFFIANIGTQS 335

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWS-PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +  +K   ++ + +V+     A   S  +    +  +       ++++   L G+ +T 
Sbjct: 336 VVAKIKPGSNKYKTVVDAGKFIAGNLSISNSDKTVVVKGHTSQHPNEVFI--LRGKKQTR 393

Query: 431 IN 432
           + 
Sbjct: 394 LT 395


>gi|67078490|ref|NP_001019937.1| WD repeat-containing protein 5B [Rattus norvegicus]
 gi|81908676|sp|Q4V8C4|WDR5B_RAT RecName: Full=WD repeat-containing protein 5B
 gi|66910626|gb|AAH97449.1| WD repeat domain 5B [Rattus norvegicus]
 gi|149060583|gb|EDM11297.1| WD repeat domain 5B [Rattus norvegicus]
          Length = 328

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 78/226 (34%), Gaps = 20/226 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +R         +   +FSPN + +A +  D      + +      +  K +      I
Sbjct: 29  YALRLTLAGHSAAISSVKFSPNGEWLASSAAD----ALIIIWGAYDGKCKKTLYGHSLEI 84

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+  R + S   D+ + ++  D++S    + L           ++P S+ IV  
Sbjct: 85  SDVAWSSDSSRLV-SASDDKTLKLW--DVRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSG 141

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + + +       +             +   G LI    + G      +    
Sbjct: 142 SF---DESVKIWEVKTGKCLKTLSAHSDPISAVHFHCNGSLIVSGSYDG---LCRIWDAA 195

Query: 380 GSQ-ERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             Q  R L ++ N  +    +SP+G+ ++ +     D+  KL+   
Sbjct: 196 SGQCLRTLADEGNPPVSFVKFSPNGKYILTATL---DSTLKLWDYS 238



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 10/131 (7%)

Query: 185 VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VSG       + D   G  +R L    +  +   +FSPN + +  AT D      + L D
Sbjct: 181 VSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDS----TLKLWD 236

Query: 244 TRIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
               R  K     ++    +   FS  G++ ++S  +D  + I+  +LQ+    +RL   
Sbjct: 237 YSRGRCLKTYTGHKNEKYCIFASFSVTGRKWVVSGSEDNMVYIW--NLQTKEIVQRLQGH 294

Query: 301 LFINISASYSP 311
             + ISA+  P
Sbjct: 295 TDVVISAACHP 305


>gi|186686591|ref|YP_001869787.1| FG-GAP repeat-containing protein [Nostoc punctiforme PCC 73102]
 gi|186469043|gb|ACC84844.1| FG-GAP repeat protein [Nostoc punctiforme PCC 73102]
          Length = 780

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/293 (18%), Positives = 95/293 (32%), Gaps = 42/293 (14%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-----FSPNQQKVAYATYDDE 234
           V+ + + G  K  L + + D  N+  L          P       SP    VA A +D  
Sbjct: 20  VTTADIDGDGKKDLVIANSDDNNVSVLLNDGSGGFGAPTNYTVGMSP--SFVAVADFDGN 77

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPR---------------FSSNGKRALISVQKD 279
             L   + ++  +     + N       P                F  +GK  L+    D
Sbjct: 78  SKLDFVVTNSIDNNVSVLLNNGSGGFGTPTNFAVGTNPNAVVVEDFDGDGKLDLVVANSD 137

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +      ++  S     LTN   +  + +     +  V + D +GK  L V  S+ ++  
Sbjct: 138 DNNISVLLNDGSGGFGTLTNF-AVGTNPN-----AVAVADFDGDGKLDLVVANSDDNNVS 191

Query: 340 RISQDKEASYFDP---VWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVED--SNLQ 393
            +  D    +  P           +A   F G  K  + V   D +   LL+ D      
Sbjct: 192 VLLNDGSGGFGTPTNFAVGTNPRSVAVADFDGDGKLDLVVANSDDNNVSLLLNDGSGGFG 251

Query: 394 AP-TWS----PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           AP +++    P  RS+      DGD    L   + +  N +L+          
Sbjct: 252 APTSFAVGTNP--RSVA-VADFDGDGKLDLVVANSDDNNVSLLLNDGSGGFGA 301


>gi|330981331|gb|EGH79434.1| hypothetical protein PSYAP_22597 [Pseudomonas syringae pv. aptata
           str. DSM 50252]
          Length = 377

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 70/186 (37%), Gaps = 26/186 (13%)

Query: 260 ILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              PR   FSS+GK   +  + +  +  ++++ ++ A ++ +    I    + +P  ++ 
Sbjct: 199 NTGPRHLAFSSDGKFLYVVGEMNGTVTAFAINQKTGALKQTSQADGIPKRLNLAPGQARD 258

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              +D +      +  ++                    +P G  +  ++ +    ++  +
Sbjct: 259 ARNNDLKDDPTPRIWAAD-----------------IRIAPNGKWLFISERTSSSVSVFKV 301

Query: 377 KKDGSQE----RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +    +        V++   +    SP+GR L+ S +K    GS  Y+I   G  + +  
Sbjct: 302 EPTNGKVAFVDNYPVQEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIGEKGALQRVSE 359

Query: 433 TPAYAS 438
            P+   
Sbjct: 360 APSGKG 365


>gi|167622725|ref|YP_001673019.1| peptidase S9B dipeptidylpeptidase IV subunit [Shewanella
           halifaxensis HAW-EB4]
 gi|167352747|gb|ABZ75360.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           halifaxensis HAW-EB4]
          Length = 748

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 63/195 (32%), Gaps = 57/195 (29%)

Query: 261 LAPR---FSSNGKRALI-SVQKDEA--MDIYSVDLQSNA--------------------- 293
            +PR    S +GKR    + +K++    D++ +D+ +                       
Sbjct: 50  SSPRGLKLSPDGKRVTYLAGRKEDQHLYDLWQMDVATGKQSLLIDADKLEAGELSDEEKA 109

Query: 294 --TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               +      I +   +S DS+ I+  +      QLY      +  K ++   E    D
Sbjct: 110 RRERQRIYGQGI-MEYFWSDDSAAILIPA----AGQLYYYSVADNKVKLLAT-GEGFATD 163

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQ 393
              SP+G  ++F +       + V+     +   L  D                    + 
Sbjct: 164 ARLSPKGHFVSFVREQ----NLYVLDLKTQKITALTTDGGGAIKNAMAEFVAQEEMGRMT 219

Query: 394 APTWSPSGRSLIFSR 408
              W+P   ++ ++R
Sbjct: 220 GYWWAPDESAIAYTR 234



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 72/280 (25%), Gaps = 85/280 (30%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI-------------------------DRAPKRIG 254
           SP+ ++V Y     ED     L    +                          R  +RI 
Sbjct: 58  SPDGKRVTYLAGRKEDQHLYDLWQMDVATGKQSLLIDADKLEAGELSDEEKARRERQRIY 117

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               M     +S +    LI      A  +Y   +  N  + L         A  SP   
Sbjct: 118 GQGIMEYF--WSDDSAAILI----PAAGQLYYYSVADNKVKLLATGEGFATDARLSPKGH 171

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQG 358
            + F  +    + LYV+         ++ D   +  + +                W+P  
Sbjct: 172 FVSFVRE----QNLYVLDLKTQKITALTTDGGGAIKNAMAEFVAQEEMGRMTGYWWAPDE 227

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVED----------------------------- 389
             IA+T+       +    +  +    L E                              
Sbjct: 228 SAIAYTRIDEAGVELVTRNEIYADGIKLTEQRYPYAGENNVKVELGVVTLKDKKVVWVDL 287

Query: 390 ---SNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +++  P   W P  + L +  +        L  + ++
Sbjct: 288 GKETDIYLPRVKWLPDSKHLSYQWQSRDQQALDLRVVAID 327



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 22/153 (14%), Positives = 58/153 (37%), Gaps = 11/153 (7%)

Query: 205 YLTPSRDQILFEPR--FSPNQQKVAYATYDDED------ILRVYLMDTRIDRAPKRIGNF 256
           ++   ++  ++ PR  + P+ + ++Y     +       ++ +  +    D   +R   +
Sbjct: 284 WVDLGKETDIYLPRVKWLPDSKHLSYQWQSRDQQALDLRVVAIDDIKNDRDLVKERSQAW 343

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQ 315
            ++     F    K  + + ++D    +Y + L      +LT     ++        + +
Sbjct: 344 VNLNDDLHFLKQQKAFIWASERDGFNHLYLIGLDGKVISQLTQGDWAVDAVEYIDEKAGE 403

Query: 316 IVFESDREG--KEQLYVMQSNGSDQKRISQDKE 346
           I F   +    ++QLY +   G   + ISQ   
Sbjct: 404 IYFTGRKTKVIEKQLYRVALAGGKVEDISQRSG 436


>gi|170093950|ref|XP_001878196.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164646650|gb|EDR10895.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1288

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 61/196 (31%), Gaps = 22/196 (11%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +     Y+    + I  ++  +         +         P  S +G+      +  + 
Sbjct: 346 DASAFTYSKDVHKGIYSIFQYNLTTRITTTLVEASPGGASRPELSRDGRTLAFVRRVRDK 405

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQ 338
             +   DL++     + + L  ++S   +P  +   F    SD    E + +  +     
Sbjct: 406 EALVLKDLETGTIYNVWHGLTYDLSGVSAPMGTYPSFAFTPSD----EAIIIWAAGQIYS 461

Query: 339 KRISQDKEASYFDPVWSPQ--------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             +S +K         +P+           IA T+ S E   + +   D  + R   +  
Sbjct: 462 VPLSVNKRGERKASSTAPRPIPFTAHIEKRIAETRRS-ENPLVSIETNDTQRVRAFTDLR 520

Query: 391 NLQAPTWSPSGRSLIF 406
             +       G  +IF
Sbjct: 521 ADEK------GEKVIF 530


>gi|115921175|ref|XP_796426.2| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 301

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 85/280 (30%), Gaps = 44/280 (15%)

Query: 103 WNSLGAQV-LVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHT 157
           W   G Q+ +V+  +   G       L    RLWD++  KQ+  +   + P     IA  
Sbjct: 54  WTLEGHQLGVVSVDINPTGTIAASSSLDSHIRLWDLEVGKQM--RSIDAGPVDAWTIA-- 109

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
                       +G F            SG     + +   + A       +R +     
Sbjct: 110 ---------FSPEGRFL----------ASGSHVGKINLFGVESAKKESQLDTRGKFTLSI 150

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + +A    D      V + D +  +    +      I +  FS +  + L +  
Sbjct: 151 AYSPDGRFLASGAIDG----IVNIFDIQSSKLLHTLEGHAKPIRSLCFSPD-SQLLATAS 205

Query: 278 KDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D  + IY V   +L       L+          + PD++  V  S     + + V    
Sbjct: 206 DDGQIKIYDVQQANLAGT----LSGHSSWVTGIHFCPDNTHFVSNSS---DKTVKVWDCG 258

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                    D     +   ++  G  +       +   I 
Sbjct: 259 TRQCVATFYDHYDQVWQAKYNGNGSKMVSVS-DDKAIHIY 297



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/226 (13%), Positives = 64/226 (28%), Gaps = 12/226 (5%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
               + D   +++        +     +P     A ++ D      + L D  + +  + 
Sbjct: 42  CWNWENDELKLKWTLEGHQLGVVSVDINPTGTIAASSSLDS----HIRLWDLEVGKQMRS 97

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I           FS  G+    S      ++++ V+       +L       +S +YSPD
Sbjct: 98  IDAGPVDAWTIAFSPEGRFLA-SGSHVGKINLFGVESA-KKESQLDTRGKFTLSIAYSPD 155

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                F +       + +     S      +          +SP   L+A T     +  
Sbjct: 156 GR---FLASGAIDGIVNIFDIQSSKLLHTLEGHAKPIRSLCFSPDSQLLA-TASDDGQIK 211

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           I  +++      L    S +    + P      F       T    
Sbjct: 212 IYDVQQANLAGTLSGHSSWVTGIHFCPDNTH--FVSNSSDKTVKVW 255


>gi|330991329|ref|ZP_08315280.1| Dipeptidyl peptidase family member 6 [Gluconacetobacter sp. SXCC-1]
 gi|329761348|gb|EGG77841.1| Dipeptidyl peptidase family member 6 [Gluconacetobacter sp. SXCC-1]
          Length = 635

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/297 (15%), Positives = 93/297 (31%), Gaps = 47/297 (15%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
           V  +G+D   VE R  D    ++++ +      A        +   +++   G       
Sbjct: 11  VRVDGRDVYWVEGRPTD--AGRRVLVRARDGHVADVTSAPFDVGTRVHEYGGGAYAVCRG 68

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-----YAT 230
           RI+F      S     S+ +++ DG   R L         +  FSP+ + V      +  
Sbjct: 69  RIVF------SNRGDGSVWLVE-DG-PPRCLCAGAGLRYADLAFSPDGRFVFCVREDHRA 120

Query: 231 YDDEDILRVYLMDTRIDRAP-----KRIGNFRSMILAPRFSSNGKRALIS-----VQKDE 280
            D E    + ++D      P       +      + +PR S +G+              +
Sbjct: 121 QDGEPAAAIVVLDCTDTTDPAFNTGTPLVMGPDFLSSPRPSPDGRYLAWIEWDHPAMPWD 180

Query: 281 AMDIYSVDL--QSNATERLTNTLFIN---------ISASYSPDSSQIVFESDREGKEQLY 329
           +  + +  L  + +   RL     +          I   +      +   SDR G   LY
Sbjct: 181 STRLRAASLLQEGDDPPRLAAPWSVAGEDGQAESVIEPCWDRSGHLLA-LSDRSGWWNLY 239

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWS---------PQGDLIAFTKFSGEKFAIGVMK 377
              + G+    ++   +A    P W            G ++A     G    + +  
Sbjct: 240 RFDTTGAAPVAMAPM-QAEIGQPHWVFGLRSYVPLDDGSILAMVISEGAAHMVSIRD 295



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 44/151 (29%), Gaps = 23/151 (15%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+R L+  +     D+ S                     +Y+    +IVF +  +G    
Sbjct: 29  GRRVLVRARDGHVADVTSAPFDVGTRV------HEYGGGAYAVCRGRIVFSNRGDGS--- 79

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGVMK-KDGS 381
            V        + +       Y D  +SP G  +   +             I V+   D +
Sbjct: 80  -VWLVEDGPPRCLCAGAGLRYADLAFSPDGRFVFCVREDHRAQDGEPAAAIVVLDCTDTT 138

Query: 382 QERLLVEDSNLQAPTW------SPSGRSLIF 406
                     +  P +      SP GR L +
Sbjct: 139 DPAFNTGTPLVMGPDFLSSPRPSPDGRYLAW 169


>gi|299740143|ref|XP_001839016.2| transcription corepressor [Coprinopsis cinerea okayama7#130]
 gi|298404107|gb|EAU82822.2| transcription corepressor [Coprinopsis cinerea okayama7#130]
          Length = 884

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/231 (12%), Positives = 68/231 (29%), Gaps = 34/231 (14%)

Query: 220 SPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKR----IGNFRSMILAPRFSSNGKR 271
            P+  ++A    D +        +    +     P +    +      +L  R++ NG+ 
Sbjct: 23  HPDGSRIATGGLDAKIRIWSTKPILNPASEESGKPPKSLCTLSMHTGPVLVVRWAHNGRW 82

Query: 272 ALISVQKDEAMDIYSVDLQSNA---------------TERLTNTLFINISASYSPDSSQI 316
              S   DE + I+ +D                     +RL          ++SP    +
Sbjct: 83  LA-SGSDDEIVMIWDLDPHGGGKVWGSDEVNVEGWKPLKRLPGHDSDVTDVAWSPQDRYL 141

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                     ++ +      +  R  +  +       W P G+ +A T+       I   
Sbjct: 142 A---SVGLDSKVIIWDGYTLECVRKLEQHQGFVKGVCWDPVGEFLA-TQSDDRTVKIWRT 197

Query: 377 KKDGSQERLL------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +    +  +          +  +  +WSP G  +  S   +      + ++
Sbjct: 198 RDWSLEAEVTKPFEDSPGSTFFRRLSWSPDGAHITASNATNNKGFVFIAAV 248



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 24/221 (10%), Positives = 63/221 (28%), Gaps = 32/221 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT- 230
            ++++ +    S  SG    SLC +                 +   R++ N + +A  + 
Sbjct: 40  IWSTKPILNPASEESGKPPKSLCTLSM-----------HTGPVLVVRWAHNGRWLASGSD 88

Query: 231 -----------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                      +    +     ++    +  KR+    S +    +S   +         
Sbjct: 89  DEIVMIWDLDPHGGGKVWGSDEVNVEGWKPLKRLPGHDSDVTDVAWSPQDRYLA---SVG 145

Query: 280 EAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
               +   D  +     +L           + P    +  +SD +   +++  +    + 
Sbjct: 146 LDSKVIIWDGYTLECVRKLEQHQGFVKGVCWDPVGEFLATQSD-DRTVKIWRTRDWSLEA 204

Query: 339 KRISQ----DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +             +    WSP G  I  +  +  K  + +
Sbjct: 205 EVTKPFEDSPGSTFFRRLSWSPDGAHITASNATNNKGFVFI 245


>gi|298482171|ref|ZP_07000359.1| dipeptidyl-peptidase IV [Bacteroides sp. D22]
 gi|298271728|gb|EFI13301.1| dipeptidyl-peptidase IV [Bacteroides sp. D22]
          Length = 736

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 47/161 (29%), Gaps = 33/161 (20%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-------SYFDPVWSPQGDLI- 361
            PD     +        Q+        ++  +  D          ++    +SP G  + 
Sbjct: 46  MPDGEH--YTQMNADGTQIIKYSFKTGEKVEVIFDVNTTRECDFKNFDSYQFSPDGQKLL 103

Query: 362 -------AFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSR 408
                   +         I  +K++            L +    Q P +SP G  + F R
Sbjct: 104 IATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQVPVFSPDGTMIAFVR 163

Query: 409 KKDGDTGSKLY-----SIDLNGRNETLINTPAYASDPQWVG 444
             +      LY      +  +G+  ++IN       P WV 
Sbjct: 164 NNNIFLVKLLYGNSESQVTEDGKQNSVIN-----GIPDWVY 199



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 32/249 (12%), Positives = 77/249 (30%), Gaps = 54/249 (21%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F         + I     +P  + +  + A      +   +  +++ V   
Sbjct: 26  DLKDITSGRFRP-------ENIQGVIPMPDGEHYTQMNADGTQIIKYSFKTGEKVEV--- 75

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             ++  +    
Sbjct: 76  IFDVNTTRECDFKNFDSYQFSPDGQKLLIATKTTPIYRHSYT-----AVHYIYPLKRNDK 130

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   +A+   ++     ++L+    
Sbjct: 131 GVTTNNIIERLSDGGPQQV-----------PVFSPDGTMIAFVRNNN-----IFLVKLLY 174

Query: 247 DRAPKRIGNFRSMIL------------------APRFSSNGKRALISVQKDEAMDIYSVD 288
             +  ++                          A  FS++          +  +  YS  
Sbjct: 175 GNSESQVTEDGKQNSVINGIPDWVYEEEFSFDRALEFSADNTLIAFIRFDESEVPSYSFP 234

Query: 289 LQSNATERL 297
           + +    R+
Sbjct: 235 VFAGQAPRI 243



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 50/168 (29%), Gaps = 38/168 (22%)

Query: 219 FSPNQQKVA------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           FSP+ QK+             Y        L+        +   +R+ +     + P FS
Sbjct: 95  FSPDGQKLLIATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQV-PVFS 153

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------------------FINISAS 308
            +G        ++  + +  + L  N+  ++T                       + +  
Sbjct: 154 PDGTMIAFV--RNNNIFLVKL-LYGNSESQVTEDGKQNSVINGIPDWVYEEEFSFDRALE 210

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDP 352
           +S D++ I F    E +   Y          RI        E +Y  P
Sbjct: 211 FSADNTLIAFIRFDESEVPSYSFPVFAGQAPRIDALKDYPGEYTYKYP 258


>gi|239613766|gb|EEQ90753.1| eukaryotic translation initiation factor 2A [Ajellomyces
           dermatitidis ER-3]
          Length = 704

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 15/164 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++  S   + +L ++  +G     +   ++  + +  +SPN ++             +
Sbjct: 221 VDKTGKSYYGETTLYLLSANGGFDSRIDLDKEGPIHDVTWSPNSKEFGVVYGYMPAKTTI 280

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  LAPR    FS NG+  +++   + A  +   DL  + T+
Sbjct: 281 FNN---------RAVATHSFALAPRNTIIFSPNGRFVVVAGFGNLAGQMDIYDLDKDYTK 331

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSD 337
             T          +SPD   I     S R   +    +   G  
Sbjct: 332 IATIEASNASVCEWSPDGKFILTATTSPRLRVDNGVRIWHVGGG 375



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 17/128 (13%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-- 381
           G+  LY++ +NG    RI  DKE    D  WSP                 G M    +  
Sbjct: 230 GETTLYLLSANGGFDSRIDLDKEGPIHDVTWSPNSKEFGVV--------YGYMPAKTTIF 281

Query: 382 QERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAY 436
             R +   S   AP     +SP+GR ++ +   +      +Y +D +  +  T+  + A 
Sbjct: 282 NNRAVATHSFALAPRNTIIFSPNGRFVVVAGFGNLAGQMDIYDLDKDYTKIATIEASNAS 341

Query: 437 ASDPQWVG 444
             +  W  
Sbjct: 342 VCE--WSP 347



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 63/181 (34%), Gaps = 20/181 (11%)

Query: 256 FRSMILAPRFSSNGKRALISVQKD---------EAMDIYSVDLQSNATERL-TNTLFINI 305
           F+   +  ++++ G   ++  Q D             +Y +        R+  +      
Sbjct: 197 FKGDKVQLKWNNTGTTLIVLAQTDVDKTGKSYYGETTLYLLSANGGFDSRIDLDKEGPIH 256

Query: 306 SASYSPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             ++SP+S +  V       K  ++  ++  +    +     A     ++SP G  +   
Sbjct: 257 DVTWSPNSKEFGVVYGYMPAKTTIFNNRAVATHSFAL-----APRNTIIFSPNGRFVVVA 311

Query: 365 KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYS 420
            F      + +   D    ++   E SN     WSP G+ ++ +        D G +++ 
Sbjct: 312 GFGNLAGQMDIYDLDKDYTKIATIEASNASVCEWSPDGKFILTATTSPRLRVDNGVRIWH 371

Query: 421 I 421
           +
Sbjct: 372 V 372


>gi|261193803|ref|XP_002623307.1| eukaryotic translation initiation factor 2A [Ajellomyces
           dermatitidis SLH14081]
 gi|239588912|gb|EEQ71555.1| eukaryotic translation initiation factor 2A [Ajellomyces
           dermatitidis SLH14081]
          Length = 704

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 15/164 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++  S   + +L ++  +G     +   ++  + +  +SPN ++             +
Sbjct: 221 VDKTGKSYYGETTLYLLSANGGFDSRIDLDKEGPIHDVTWSPNSKEFGVVYGYMPAKTTI 280

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  LAPR    FS NG+  +++   + A  +   DL  + T+
Sbjct: 281 FNN---------RAVATHSFALAPRNTIIFSPNGRFVVVAGFGNLAGQMDIYDLDKDYTK 331

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSD 337
             T          +SPD   I     S R   +    +   G  
Sbjct: 332 IATIEASNASVCEWSPDGKFILTATTSPRLRVDNGVRIWHVGGG 375



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 17/128 (13%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-- 381
           G+  LY++ +NG    RI  DKE    D  WSP                 G M    +  
Sbjct: 230 GETTLYLLSANGGFDSRIDLDKEGPIHDVTWSPNSKEFGVV--------YGYMPAKTTIF 281

Query: 382 QERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAY 436
             R +   S   AP     +SP+GR ++ +   +      +Y +D +  +  T+  + A 
Sbjct: 282 NNRAVATHSFALAPRNTIIFSPNGRFVVVAGFGNLAGQMDIYDLDKDYTKIATIEASNAS 341

Query: 437 ASDPQWVG 444
             +  W  
Sbjct: 342 VCE--WSP 347



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 63/181 (34%), Gaps = 20/181 (11%)

Query: 256 FRSMILAPRFSSNGKRALISVQKD---------EAMDIYSVDLQSNATERL-TNTLFINI 305
           F+   +  ++++ G   ++  Q D             +Y +        R+  +      
Sbjct: 197 FKGDKVQLKWNNTGTTLIVLAQTDVDKTGKSYYGETTLYLLSANGGFDSRIDLDKEGPIH 256

Query: 306 SASYSPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             ++SP+S +  V       K  ++  ++  +    +     A     ++SP G  +   
Sbjct: 257 DVTWSPNSKEFGVVYGYMPAKTTIFNNRAVATHSFAL-----APRNTIIFSPNGRFVVVA 311

Query: 365 KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYS 420
            F      + +   D    ++   E SN     WSP G+ ++ +        D G +++ 
Sbjct: 312 GFGNLAGQMDIYDLDKDYTKIATIEASNASVCEWSPDGKFILTATTSPRLRVDNGVRIWH 371

Query: 421 I 421
           +
Sbjct: 372 V 372


>gi|320538982|ref|ZP_08038657.1| putative 6-phosphogluconolactonase [Serratia symbiotica str.
           Tucson]
 gi|320030915|gb|EFW12919.1| putative 6-phosphogluconolactonase [Serratia symbiotica str.
           Tucson]
          Length = 331

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 83/238 (34%), Gaps = 20/238 (8%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +   +Y    +    +    +  AP +  +      +       +R L+   K++ +
Sbjct: 92  GRYLFSVSYSGNCVSVSQIGHDGVVTAPIQQIDGPITPHSANIDPANQRLLVPCLKEDRI 151

Query: 283 DIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            ++++ L    T  +     T T       ++ P+       ++ +G   +  +  NGS 
Sbjct: 152 RLFNLGLDGQLTTNVQEAVNTATGAGPRHMAFYPNGKYAYCVNELDGTVDVLTISENGSK 211

Query: 338 QK--------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +         +         D   +P G  +  ++ +     I  +  DGS   ++   
Sbjct: 212 YRVTQTLDIMPVGFAGTRWAADIHITPNGRFLYTSERTASILTIFSISADGSMLSVVGHH 271

Query: 390 SNLQAPT-WSPS--GRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQWV 443
                P  ++    GR +I + ++ G     ++ ID  +G+  TL   P     P WV
Sbjct: 272 PTEVQPRGFNIDHSGRFVISACQQSGH--IVVHEIDQSSGKLSTLARYPVGKG-PMWV 326


>gi|242092872|ref|XP_002436926.1| hypothetical protein SORBIDRAFT_10g011100 [Sorghum bicolor]
 gi|241915149|gb|EER88293.1| hypothetical protein SORBIDRAFT_10g011100 [Sorghum bicolor]
          Length = 445

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 57/143 (39%), Gaps = 7/143 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDR 322
             S +GK  +I     +  D   +D  S  T   +   L  + ++++SPD        ++
Sbjct: 282 SLSPDGKLVIIV---GDDTDALLIDANSGKTINSVKGHLDYSFASAWSPDGLTFA-TGNQ 337

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +   +++  + N S    + +    +     ++  G  +A  + + +   I  +K D ++
Sbjct: 338 DKTCRIWDAR-NLSQSVHVLRGNVGAIRSIRFTSDGQFLAMAE-AADFVHIFDIKSDYNK 395

Query: 383 ERLLVEDSNLQAPTWSPSGRSLI 405
            + L     +   ++SP   +L 
Sbjct: 396 RQELDFFGEVSGMSFSPDTDTLY 418



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 10/182 (5%)

Query: 191 NSLCVMDRDGANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           N   V + D    +     R D  +     SP+ + V        D     L+D    + 
Sbjct: 254 NDCGVREYDMERYQLFKHFRFDWPVNHTSLSPDGKLVIIV----GDDTDALLIDANSGKT 309

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              +        A  +S +G     +  +D+   I+     S +   L   +    S  +
Sbjct: 310 INSVKGHLDYSFASAWSPDGLTFA-TGNQDKTCRIWDARNLSQSVHVLRGNVGAIRSIRF 368

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D     F +  E  + +++        KR   D         +SP  D + +   S  
Sbjct: 369 TSDGQ---FLAMAEAADFVHIFDIKSDYNKRQELDFFGEVSGMSFSPDTDTL-YVGISDR 424

Query: 370 KF 371
            +
Sbjct: 425 TY 426


>gi|182412386|ref|YP_001817452.1| WD40 domain-containing protein [Opitutus terrae PB90-1]
 gi|177839600|gb|ACB73852.1| WD40 domain protein beta Propeller [Opitutus terrae PB90-1]
          Length = 297

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 71/236 (30%), Gaps = 39/236 (16%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRIG-NFRSMILAPR 264
           S  Q      F P    + +           + V    T+    P+        +   P 
Sbjct: 34  SSPQFESHAAFDPVTGDLYFVRSSPQFRGWRILVSRPTTQGWSEPEAPSFAGDGVEADPF 93

Query: 265 FSSNGKRALISVQKDEA------MDIYSVDL-QSNATERLT------NTLFINISASYSP 311
           F+++G+       +         +D++ VD       ++ T      N+         +P
Sbjct: 94  FTADGRTLYFISNRSTDGVHRKDLDLWRVDRNADGTWQQPTRLPEPLNSTSTEWFPRPAP 153

Query: 312 DSSQIVFESDREGK---EQLYVMQSNGSDQKRISQDKEA-----SYFDPVWSPQGDLIAF 363
           D     F S+R G      ++           +     A       F+P+ SP G  +  
Sbjct: 154 DG-WFYFGSNRPGGFGGNDIWRGHPQPDGHWVVENLGAAINSAADEFEPLPSPDGSRLII 212

Query: 364 --------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                   ++     +       DG+       D       +SPSGRSL+FSR   
Sbjct: 213 MAADGLYQSRRDARGWRPKEKLGDGAN-----ADGMEVGAVFSPSGRSLLFSRDTG 263


>gi|170061682|ref|XP_001866340.1| Oseg5 [Culex quinquefasciatus]
 gi|167879837|gb|EDS43220.1| Oseg5 [Culex quinquefasciatus]
          Length = 751

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 76/225 (33%), Gaps = 18/225 (8%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLT 207
              R I    S  + ++++   G   +       + + +      + +  R G  +R   
Sbjct: 92  GDGRFIILNKSARVERNVSAHSGSIVAGRWSPDGAGLLTAGEDGIIKIWSRSGM-LRSTV 150

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              +  +   R++PN   +AY          V +     +    +      ++L   +S+
Sbjct: 151 VQHEGQIRCARWAPNATAIAYC-----QGPFVAIKPLAANSKLTKWRAHDGLVLCIAWSN 205

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           N      S  +D    I+  D Q       +++   I  S  +SPD   +       G  
Sbjct: 206 NTDMLA-SGGEDCRYKIW--DAQGANIYTSVSDDYAI-TSLDFSPDGELLA----VGGFN 257

Query: 327 QLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            L +   +G      R +QD   S F+ VWS  G  +     +G 
Sbjct: 258 MLKLCHYSGWSHSINRFNQDVVGSLFNIVWSADGTQVTAGTSTGT 302



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/168 (15%), Positives = 62/168 (36%), Gaps = 13/168 (7%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
           +++  +  R  + +      I+A R+S +G   L +  +D  + I+S   +S      + 
Sbjct: 96  FIILNKSARVERNVSAHSGSIVAGRWSPDGAGLL-TAGEDGIIKIWS---RSGMLRSTVV 151

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   A ++P+++ I +         + +     + +    +  +       WS   
Sbjct: 152 QHEGQIRCARWAPNATAIAYC----QGPFVAIKPLAANSKLTKWRAHDGLVLCIAWSNNT 207

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLI 405
           D++A     GE     +    G+     + +D  + +  +SP G  L 
Sbjct: 208 DMLA---SGGEDCRYKIWDAQGANIYTSVSDDYAITSLDFSPDGELLA 252



 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 47/149 (31%), Gaps = 11/149 (7%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                   ++  +     ++      ++  +SPD + ++      G++ +  + S     
Sbjct: 91  SGDGRFIILNKSARVERNVSAHSGSIVAGRWSPDGAGLL----TAGEDGIIKIWSRSGML 146

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           +      E       W+P    IA+    G   AI  +  +    +    D  +    WS
Sbjct: 147 RSTVVQHEGQIRCARWAPNATAIAYC--QGPFVAIKPLAANSKLTKWRAHDGLVLCIAWS 204

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            +   L        D   K++  D  G N
Sbjct: 205 NNTDMLA---SGGEDCRYKIW--DAQGAN 228


>gi|167585887|ref|ZP_02378275.1| 3-carboxymuconate cyclase-like protein [Burkholderia ubonensis Bu]
          Length = 391

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 96/326 (29%), Gaps = 30/326 (9%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ-IIGKKFFSSPASWRKIAHTISDDIYQS 165
           G   L+ G     G D + V +R +D K      +      +P+         +      
Sbjct: 27  GVYNLLVGTYTDGGSDGIYV-YR-FDTKTGSVAPVSSTKTVNPSYLLPSRDGRTVYAVNE 84

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQ-ILFEPRFS--- 220
           + G+ G  + R    +    +     + +  +  +G +  YL+ S D   L    +S   
Sbjct: 85  LPGDNGPADQRGGISAFRFDAKTGALTFIGRVSSEGNDPCYLSLSPDGKYLVTANYSVAA 144

Query: 221 -PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            P      +   +D  +    L        P +     +   +  FS +G+   +     
Sbjct: 145 NPGGSFAVFPLREDGAVSEAALTVHHQGSGPVKGRQDGAHAHSAVFSPDGRTLFVQDLGA 204

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISA-------SYSPDSSQIVFESDRE------GK 325
           + +  Y   +         T+T +  +          +  +       S+        G 
Sbjct: 205 DKIFGYRYTVDGSRGLISPTDTRYTPVKPGSGPRHMVFGANGRYAYVTSELTAAVEVFGH 264

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI---GVMKKDGSQ 382
           +   +               +        SP G  + +    G+   I    V   DG  
Sbjct: 265 QDGKLTPVQTVPMAAPGFKGKVGGAAIHLSPDGRFL-YASNRGDANEIVIYAVNPADGRL 323

Query: 383 ERLLVEDSNLQAPT---WSPSGRSLI 405
           + +  + S  + P      P+G+ LI
Sbjct: 324 KTVGRQSSLGRTPREFLIDPTGKWLI 349


>gi|168028435|ref|XP_001766733.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162681942|gb|EDQ68364.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 862

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 67/214 (31%), Gaps = 12/214 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A    D++    + L +              + I A  F       ++S  
Sbjct: 352 AFSPDSQYLASGADDNK----LKLWNVASGSCFVTFTEHTNSITAVLFLP-ANHVVVSAS 406

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  +  + + ++     R   T       S + D S  V  +      Q+YV       
Sbjct: 407 LDGTVRAFDM-VRYRN-FRTFTTPTPTQFVSLAADPSGEVLCAGTLDGFQIYVWSVKTGR 464

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              +    E       +SP  +++A + +        V +  G+ E       ++    +
Sbjct: 465 LLDVLSGHEGPVHGLSFSPTSEMLASSSWDKTVKIWDVFEGKGNVET-FTHTHDVLTVVY 523

Query: 398 SPSGRSLIFSRKKD----GDTGSKLYSIDLNGRN 427
            P  + +  S         D    +    ++GR 
Sbjct: 524 RPDSKQIACSTLDGHIHFWDPTDGVEVASIDGRR 557



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 48/147 (32%), Gaps = 7/147 (4%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D  ++Y+   +  R    +      +    FS   +    S   D+ + I+ V       
Sbjct: 451 DGFQIYVWSVKTGRLLDVLSGHEGPVHGLSFSPTSEMLA-SSSWDKTVKIWDVFEGKGNV 509

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           E  T+T  +     Y PDS QI   S  +G    +   ++G +   I  D          
Sbjct: 510 ETFTHTHDVLTV-VYRPDSKQIA-CSTLDGHIHFWD-PTDGVEVASI--DGRRDIKGGRL 564

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                  A    SG+ F       DGS
Sbjct: 565 MGD-RRTAENSSSGKSFTSLSFSADGS 590


>gi|149018550|gb|EDL77191.1| acylpeptide hydrolase, isoform CRA_a [Rattus norvegicus]
          Length = 732

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 17/131 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------DDEDILRVYL 241
             +++L  +D  G     L+      +  PR SP+Q ++ Y  Y           L +Y 
Sbjct: 277 NRRSALFYVDLSGGKCELLSDG-SLAICSPRLSPDQCRIVYLQYPCLAPHHQCSQLCLYD 335

Query: 242 MDTRI-----DRAPKRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQS 291
             T++     D  P+++G   S I         +S++ +R +    +    D+++VD Q+
Sbjct: 336 WYTKVTSVVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFAVDTQT 395

Query: 292 NATERLTNTLF 302
            +   LT    
Sbjct: 396 GSITSLTAAGS 406



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 59/187 (31%), Gaps = 29/187 (15%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDIL----------RVYL 241
           LCV+D D  NI  L    + +      ++P    V +  +  E                 
Sbjct: 224 LCVLDIDSGNISVLEGVPENVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRYCTNRRSALF 283

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNA--- 293
                    + + +    I +PR S +  R +       A       +   D  +     
Sbjct: 284 YVDLSGGKCELLSDGSLAICSPRLSPDQCRIVYLQYPCLAPHHQCSQLCLYDWYTKVTSV 343

Query: 294 -----TERLTNT-LFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                  +L  +   I  S      +S DS ++VF+S +  ++ L+ + +       ++ 
Sbjct: 344 VVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFAVDTQTGSITSLTA 403

Query: 344 DKEASYF 350
              A  +
Sbjct: 404 AGSAGSW 410


>gi|149175385|ref|ZP_01854006.1| vegetatible incompatibility protein HET-E1 [Planctomyces maris DSM
            8797]
 gi|148845653|gb|EDL59995.1| vegetatible incompatibility protein HET-E1 [Planctomyces maris DSM
            8797]
          Length = 1097

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 55/282 (19%), Positives = 96/282 (34%), Gaps = 25/282 (8%)

Query: 114  GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
            G+ I  G D   V  R+WD    +++      ++P         +S   Y S T      
Sbjct: 787  GKQIATGDDSQMV--RIWDATSGQELDTVGGHTAP---------VSAVGYTSKTTVVSGS 835

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
              + + V        +   L   ++D + +     S   +  +  FSP+ + +A    D 
Sbjct: 836  ADKTVLVQSIQPVWTLVAQLGADEKDPSKVGGSPISNRALCLD--FSPDGKLLAVGGGDP 893

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 + + D    +  K++G+  S  +L  RFS +GK  L +   D+ + I+ V    N
Sbjct: 894  SRSGEITIWDAATGKLVKKLGDAHSDTVLGIRFSRSGKSLL-TGAADKFVKIFDV-ASGN 951

Query: 293  ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              +         +  ++  D S IV          + V      +QKR            
Sbjct: 952  FVKSFEGHTHHVLDVAWKADESTIV---SSGADNVIKVWNIETGEQKRTISGYSKQVTSI 1008

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNL 392
             +   GD I     SG       M     GS  R L   ++ 
Sbjct: 1009 AFLGLGDNIV----SGGGDKTVRMHLTTNGSNYRNLSGSTDY 1046


>gi|20072022|gb|AAH26594.1| Apeh protein [Mus musculus]
          Length = 587

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 17/131 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD----DEDILRVYLMD 243
             +++L  +D  G     L       +  PR SP+Q +V Y  Y          +++L D
Sbjct: 132 NRRSALYYVDLSGGKCE-LLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYD 190

Query: 244 TRI-------DRAPKRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQS 291
                     D  P+++G   S I         +S++ +R +    +    D+++VD Q+
Sbjct: 191 WYTKVTSLVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQT 250

Query: 292 NATERLTNTLF 302
            +   LT    
Sbjct: 251 GSVTSLTAGGS 261



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 66/188 (35%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D +  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 79  LCVLDIESGNISVLEGVPENVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRYCTNRRSALY 138

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEA-MDIYSVDLQSNA-- 293
            +D    +  + + +    + +PR S +  R +     S+        ++  D  +    
Sbjct: 139 YVDLSGGKC-ELLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYDWYTKVTS 197

Query: 294 ------TERLTNT-LFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  +   I  S      +S DS ++VF+S +  ++ L+ + +       ++
Sbjct: 198 LVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQTGSVTSLT 257

Query: 343 QDKEASYF 350
               A  +
Sbjct: 258 AGGSAGSW 265



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 38/136 (27%), Gaps = 19/136 (13%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQ- 332
           +    +Y VDL     E L++      S   SPD  ++V+             QL++   
Sbjct: 132 NRRSALYYVDLSGGKCELLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYDW 191

Query: 333 -------SNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                        +++ +     Y        WS     + F      +  +  +     
Sbjct: 192 YTKVTSLVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQTG 251

Query: 382 QERLLVEDSNLQAPTW 397
               L    +    +W
Sbjct: 252 SVTSLTAGGSAG--SW 265


>gi|73966983|ref|XP_548262.2| PREDICTED: similar to Notchless homolog 1 (WD-repeat protein
           HUSSY-07) [Canis familiaris]
          Length = 468

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 89  VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCQGHRHW 144

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSN-GSDQKRISQDKEASYFDPVW-----S 355
            +S S+SPD   +       G    Q+ +   + G    R+            W     +
Sbjct: 145 VLSISWSPDGKTLA-----SGCKNGQILLWDPSTGKQVGRVLAGHSKWITGLSWEPLHAN 199

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + V     G  ER+L     ++    W   G  L++S  +D
Sbjct: 200 PECRYMASSSKDGS---VRVWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 252



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  I   S     + +
Sbjct: 326 GPERLVSGSDDFTLFMWSPAEDKKPLARMTGHQALINQVLFSPDSRIIASASF---DKSI 382

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 383 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAADLPGH 441

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 442 ADEVYAVDWSPDGQRVA 458



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/242 (10%), Positives = 65/242 (26%), Gaps = 42/242 (17%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ + +A      ++   +    + 
Sbjct: 117 SGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKTLA---SGCKNGQILLWDPST 173

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ ++           LT  
Sbjct: 174 GKQVGRVLAGHSKWITGLSWEPLHANPECRYMA-SSSKDGSVRVWDT-TAGRCERILTGH 231

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   +  D   +++ + ++    + V +++     R  Q           S     
Sbjct: 232 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD--- 284

Query: 361 IAFTKFSG----EKFAIGVMKKDG-------------------SQERLLVEDSNLQAPTW 397
             +   +G     + +I      G                     ERL+    +     W
Sbjct: 285 --YALRTGAFEPAEASINAQDLQGSLQELKDRALRRYNLVRGQGPERLVSGSDDFTLFMW 342

Query: 398 SP 399
           SP
Sbjct: 343 SP 344



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 198 RDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            DG   +YL         +++  +S + + +   + D      + + D +  +    +  
Sbjct: 385 WDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAADLPG 440

Query: 256 FRSMILAPRFSSNGKRAL 273
               + A  +S +G+R  
Sbjct: 441 HADEVYAVDWSPDGQRVA 458


>gi|225555305|gb|EEH03597.1| eukaryotic translation initiation factor 2A [Ajellomyces capsulatus
           G186AR]
          Length = 708

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 17/188 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++  S   + +L ++  +G     +   ++  + +  +SPN ++             +
Sbjct: 223 VDKTGKSYYGETTLYLLSANGGFDSRIDLDKEGPIHDVTWSPNSKEFGVVYGYMPAKTTI 282

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  LAPR    FS NG+  +++   + A  +   DL  + T+
Sbjct: 283 FNN---------RAVATHSFALAPRNTIIFSPNGRFVIVAGFGNLAGQLDIYDLDRDYTK 333

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             T          +SPD   I     S R   +    +   G     +  +     +   
Sbjct: 334 VATIEASNASVCEWSPDGKFILTATTSPRLRVDNGVRIWHVGGGL--MYNEDLTELYQVC 391

Query: 354 WSPQGDLI 361
           W PQ   +
Sbjct: 392 WRPQSTTV 399



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 23/222 (10%)

Query: 218 RFSP-NQQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALI 274
             SP +   +A +          V + +      P    NF +   +  ++++ G   ++
Sbjct: 158 ALSPGDSNSIAVFIPERKGLPASVRIFNVPQFNTPVSQKNFFKGDKVQLKWNNTGTTLIV 217

Query: 275 SVQKD---------EAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQI-VFESDRE 323
             Q D             +Y +        R+  +        ++SP+S +  V      
Sbjct: 218 LAQTDVDKTGKSYYGETTLYLLSANGGFDSRIDLDKEGPIHDVTWSPNSKEFGVVYGYMP 277

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            K  ++  ++  +    +     A     ++SP G  +    F      + +   D    
Sbjct: 278 AKTTIFNNRAVATHSFAL-----APRNTIIFSPNGRFVIVAGFGNLAGQLDIYDLDRDYT 332

Query: 384 RLLV-EDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
           ++   E SN     WSP G+ ++ +        D G +++ +
Sbjct: 333 KVATIEASNASVCEWSPDGKFILTATTSPRLRVDNGVRIWHV 374



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 17/128 (13%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-- 381
           G+  LY++ +NG    RI  DKE    D  WSP                 G M    +  
Sbjct: 232 GETTLYLLSANGGFDSRIDLDKEGPIHDVTWSPNSKEFGVV--------YGYMPAKTTIF 283

Query: 382 QERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAY 436
             R +   S   AP     +SP+GR +I +   +      +Y +D +  +  T+  + A 
Sbjct: 284 NNRAVATHSFALAPRNTIIFSPNGRFVIVAGFGNLAGQLDIYDLDRDYTKVATIEASNAS 343

Query: 437 ASDPQWVG 444
             +  W  
Sbjct: 344 VCE--WSP 349


>gi|78046268|ref|YP_362443.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78034698|emb|CAJ22343.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 348

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 53/130 (40%), Gaps = 10/130 (7%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  Q       EG+ Q+ ++ +     +++   +  +     ++P G  +  +     
Sbjct: 136 SPDGKQFAVCV--EGQNQVTLIDAAQFVVQQVIATRGQAPEHCAYTPDGKWLLTSNEGSN 193

Query: 370 KFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                +++    + R ++    + +   ++P G S+  ++    +T + +  IDL  R +
Sbjct: 194 DMD--MIELATHRSRGVVATSGHPRGMAFAPDGHSVYIAQ----ETANVVDVIDLQTR-Q 246

Query: 429 TLINTPAYAS 438
              + PA A 
Sbjct: 247 RRASLPAGAR 256



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 72/198 (36%), Gaps = 13/198 (6%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +N + ++D     ++ +  +R Q      ++P+ + +  +     D+  + L   R   
Sbjct: 148 GQNQVTLIDAAQFVVQQVIATRGQAPEHCAYTPDGKWLLTSNEGSNDMDMIELATHRSRG 207

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                G+ R M     F+ +G    I+  ++ A  +  +DLQ+                +
Sbjct: 208 VVATSGHPRGM----AFAPDGHSVYIA--QETANVVDVIDLQTRQRRASLPAGARTAGVA 261

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S D +++ + S+  G   + V+    +         +  + +P  +P GD +       
Sbjct: 262 LSGDGARL-YASN-GGAGTVSVIDLKTARTLAEIPVGQRPW-NPALTPAGDKLYVANGRS 318

Query: 369 EKFAIGVMKKDGSQERLL 386
              ++     D +  R L
Sbjct: 319 NSVSV----IDTASLREL 332



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 52/157 (33%), Gaps = 10/157 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDR 322
             S +GK+  + V+      +  +D      +++  T        +Y+PD   ++  S+ 
Sbjct: 134 ALSPDGKQFAVCVE--GQNQVTLIDAAQFVVQQVIATRGQAPEHCAYTPDGKWLL-TSNE 190

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              +   +  +    +  ++           ++P G  +   + +     + V+     Q
Sbjct: 191 GSNDMDMIELATHRSRGVVATSGHP--RGMAFAPDGHSVYIAQETAN--VVDVIDLQTRQ 246

Query: 383 ERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            R  L   +       S  G  L ++      T S +
Sbjct: 247 RRASLPAGARTAGVALSGDGARL-YASNGGAGTVSVI 282


>gi|296473483|gb|DAA15598.1| coronin-7 [Bos taurus]
          Length = 915

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 70/205 (34%), Gaps = 22/205 (10%)

Query: 184 VVSGIIKNSLCVMDRDGAN-----IRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDIL 237
           V     +  L  +  DG          +     + ++  RF P     +A ++YD    L
Sbjct: 553 VAGEDARIRLWRVPPDGLQEVLTMPEAVLTGHTEKIYSLRFHPLAADVLASSSYD----L 608

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V + D ++     R+   R  I    +S +G++   +V KD  + IY       + E L
Sbjct: 609 TVRIWDLKVGAEQLRLQGHRDQIFGLAWSPDGQQLA-TVCKDGRLRIYEPR---GSPEPL 664

Query: 298 TNTLFIN----ISASYSPDSSQIV---FESDREGKEQLYVMQS-NGSDQKRISQDKEASY 349
                          +  D   ++   F+S  E +  LY  ++  G     +  D   S 
Sbjct: 665 QEGPGPEGARGARVVWVCDGHYLLVSGFDSRSERQLLLYSAKALAGGPSAVLGLDVAPST 724

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIG 374
             P + P   L+  T     +  + 
Sbjct: 725 LLPSYDPDTGLVLLTGKGDTRVFLY 749


>gi|262408528|ref|ZP_06085074.1| dipeptidyl peptidase IV [Bacteroides sp. 2_1_22]
 gi|294646512|ref|ZP_06724149.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294807540|ref|ZP_06766337.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           xylanisolvens SD CC 1b]
 gi|262353393|gb|EEZ02487.1| dipeptidyl peptidase IV [Bacteroides sp. 2_1_22]
 gi|292638131|gb|EFF56512.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           ovatus SD CC 2a]
 gi|294445241|gb|EFG13911.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           xylanisolvens SD CC 1b]
          Length = 736

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 47/161 (29%), Gaps = 33/161 (20%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-------SYFDPVWSPQGDLI- 361
            PD     +        Q+        ++  +  D          ++    +SP G  + 
Sbjct: 46  MPDGEH--YTQMNADGTQIIKYSFKTGEKVEVIFDVNTTRECDFKNFDSYQFSPDGQKLL 103

Query: 362 -------AFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSR 408
                   +         I  +K++            L +    Q P +SP G  + F R
Sbjct: 104 IATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQVPVFSPDGTMIAFVR 163

Query: 409 KKDGDTGSKLY-----SIDLNGRNETLINTPAYASDPQWVG 444
             +      LY      +  +G+  ++IN       P WV 
Sbjct: 164 NNNIFLVKLLYGNSESQVTEDGKQNSVIN-----GIPDWVY 199



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 52/395 (13%), Positives = 119/395 (30%), Gaps = 87/395 (22%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F         + I     +P  + +  + A      +   +  +++ V   
Sbjct: 26  DLKDITSGRFRP-------ENIQGVIPMPDGEHYTQMNADGTQIIKYSFKTGEKVEV--- 75

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             ++  +    
Sbjct: 76  IFDVNTTRECDFKNFDSYQFSPDGQKLLIATKTTPIYRHSYT-----AVHYIYPLKRNDK 130

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   +A+   ++     ++L+    
Sbjct: 131 GVTTNNIIERLSDGGPQQV-----------PVFSPDGTMIAFVRNNN-----IFLVKLLY 174

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +  ++                          A  FS++          +  +  YS  
Sbjct: 175 GNSESQVTEDGKQNSVINGIPDWVYEEEFGFDRALEFSADNTLIAFIRFDESEVPSYSFP 234

Query: 289 LQSNATERLTNTLFINISASY------SPDSSQIVFESD-REGKEQLYVMQSN-GSDQKR 340
           + +    R+          +Y       P+S   V   D +    +   +  +      R
Sbjct: 235 VFAGQAPRIDALKDYPGEYTYKYPKAGYPNSKVEVRTYDIKSHVTRTMKLPLDADGYIPR 294

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---- 396
           I   K+A+            I       ++F +       +  +L++ D   ++P     
Sbjct: 295 IRFTKDANKLA---------IMTLNRHQDRFDLYFADPRSTLCKLILRD---ESPYYIKE 342

Query: 397 -------WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  + P         ++DG +    YS+  N
Sbjct: 343 NIFDNIQFYP--EYFSLLSERDGYSHLYWYSMGGN 375


>gi|302919612|ref|XP_003052899.1| hypothetical protein NECHADRAFT_36603 [Nectria haematococca mpVI
            77-13-4]
 gi|256733839|gb|EEU47186.1| hypothetical protein NECHADRAFT_36603 [Nectria haematococca mpVI
            77-13-4]
          Length = 1216

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 77/218 (35%), Gaps = 26/218 (11%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FS + + +A         ++++  ++  D  P+ + + +  I    FS++G   L S   
Sbjct: 1020 FSRDGKWLA---LSRTKRIKLFDWESWKDTKPRYLTSPQRAISRMEFSADGN-LLYSASY 1075

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D  + ++           L        + + S D  ++   S R     + ++      +
Sbjct: 1076 DNTVVMWET-ATGQCLRMLQFPCTAMTALACSKD--RVAVGSRRG---NVVILDLEKGAK 1129

Query: 339  KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             +             +SP G+L+A +  +G    I  +    S+      + +++ P   
Sbjct: 1130 PQSVAGHVQGIDSLAFSPDGELLA-SSTNGSSARIWDLTVTTSE----TGEGHVE-PV-- 1181

Query: 399  PSGRSLIFSRKK----DGDTGSKLYSID-LNGRNETLI 431
               R + F+         D   K+   D L+G  +  +
Sbjct: 1182 ---REIAFASNSKLVVSSDLVHKIIIWDALHGTRKNQL 1216


>gi|152989942|ref|YP_001355664.1| hypothetical protein NIS_0193 [Nitratiruptor sp. SB155-2]
 gi|151421803|dbj|BAF69307.1| hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 1007

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 78/220 (35%), Gaps = 11/220 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + +        +       +    F    + +A A+ D      + L +  
Sbjct: 548 SGGNDYAVRLWNSRSYQELAILEWHTDYVQCVSFDQQGKTLASASKDK----TICLWNVE 603

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +    +   +S +    F  + K  L S   D  + ++ ++ Q      L ++     
Sbjct: 604 TKKHLATLQGHQSYVTCVSFHPS-KNILASGSWDMQIRVWDIETQKTIAT-LNDSKSYIN 661

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S  ++ D S +       G+  ++ MQ    + K    D  AS     + P  +++A   
Sbjct: 662 SIDFNHDGSLLA-CGTEGGEVIIWQMQ--TKEAKAFFNDHTASVHAVAFHPNKNILA--S 716

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            S + + I    ++G +  L     +++A  + P G  L 
Sbjct: 717 GSEDGYVILWDYRNGEKISLFRHGFSIKAIAFHPDGTLLA 756


>gi|154279592|ref|XP_001540609.1| hypothetical protein HCAG_04449 [Ajellomyces capsulatus NAm1]
 gi|150412552|gb|EDN07939.1| hypothetical protein HCAG_04449 [Ajellomyces capsulatus NAm1]
          Length = 783

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 35/100 (35%), Gaps = 23/100 (23%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
             ++      +   +++D+        WSP G+ IA+ +  G    I    KDG+  ++ 
Sbjct: 129 NYFIQDVESGELTPLAKDQAGDLQYAAWSPVGNSIAYVR--GNNLFIW---KDGTTTQIT 183

Query: 387 VEDS---NLQAPTW---------------SPSGRSLIFSR 408
            +         P W               SP G+ L F R
Sbjct: 184 SDGGVDTFNGVPDWVYEEEIFGDRYALWFSPDGQYLAFLR 223



 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 24/111 (21%)

Query: 285 YSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +  D++S     L      ++  A++SP  + I +   R     ++          +I+ 
Sbjct: 131 FIQDVESGELTPLAKDQAGDLQYAAWSPVGNSIAYV--RGNNLFIWK----DGTTTQITS 184

Query: 344 DKEASYFD--PVW---------------SPQGDLIAFTKFSGEKFAIGVMK 377
           D     F+  P W               SP G  +AF +F         + 
Sbjct: 185 DGGVDTFNGVPDWVYEEEIFGDRYALWFSPDGQYLAFLRFDETGVPTYTVP 235



 Score = 37.3 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 16/149 (10%), Positives = 40/149 (26%), Gaps = 25/149 (16%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQIL 214
            + DD ++          S +++ +            +  + D +   +  L   +   L
Sbjct: 95  QVPDDAHEYFLKPD---LSAVMWATNYTKQYRHSYFANYFIQDVESGELTPLAKDQAGDL 151

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF--------- 265
               +SP    +AY          +++            G   +    P +         
Sbjct: 152 QYAAWSPVGNSIAYV-----RGNNLFIWKDGTTTQITSDGGVDTFNGVPDWVYEEEIFGD 206

Query: 266 ------SSNGKRALISVQKDEAMDIYSVD 288
                 S +G+        +  +  Y+V 
Sbjct: 207 RYALWFSPDGQYLAFLRFDETGVPTYTVP 235


>gi|295086780|emb|CBK68303.1| dipeptidyl-peptidase IV . Serine peptidase. MEROPS family S09B
           [Bacteroides xylanisolvens XB1A]
          Length = 736

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 47/161 (29%), Gaps = 33/161 (20%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-------SYFDPVWSPQGDLI- 361
            PD     +        Q+        ++  +  D          ++    +SP G  + 
Sbjct: 46  MPDGEH--YTQMNADGTQIIKYSFKTGEKVEVIFDVNTTRECDFKNFDSYQFSPDGQKLL 103

Query: 362 -------AFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSR 408
                   +         I  +K++            L +    Q P +SP G  + F R
Sbjct: 104 IATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQVPVFSPDGTMIAFVR 163

Query: 409 KKDGDTGSKLY-----SIDLNGRNETLINTPAYASDPQWVG 444
             +      LY      +  +G+  ++IN       P WV 
Sbjct: 164 NNNIFLVKLLYGNSESQVTEDGKQNSVIN-----GIPDWVY 199



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 52/395 (13%), Positives = 119/395 (30%), Gaps = 87/395 (22%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F         + I     +P  + +  + A      +   +  +++ V   
Sbjct: 26  DLKDITSGRFRP-------ENIQGVIPMPDGEHYTQMNADGTQIIKYSFKTGEKVEV--- 75

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             ++  +    
Sbjct: 76  IFDVNTTRECDFKNFDSYQFSPDGQKLLIATKTTPIYRHSYT-----AVHYIYPLKRNDK 130

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   +A+   ++     ++L+    
Sbjct: 131 GVTTNNIIERLSDGGPQQV-----------PVFSPDGTMIAFVRNNN-----IFLVKLLY 174

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +  ++                          A  FS++          +  +  YS  
Sbjct: 175 GNSESQVTEDGKQNSVINGIPDWVYEEEFGFDRALEFSADNTLIAFIRFDESEVPSYSFP 234

Query: 289 LQSNATERLTNTLFINISASY------SPDSSQIVFESD-REGKEQLYVMQSN-GSDQKR 340
           + +    R+          +Y       P+S   V   D +    +   +  +      R
Sbjct: 235 VFAGQAPRIDALKDYPGEYTYKYPKAGYPNSKVEVRTYDIKSHVTRTMKLPLDADGYIPR 294

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---- 396
           I   K+A+            I       ++F +       +  +L++ D   ++P     
Sbjct: 295 IRFTKDANKLA---------IMTLNRHQDRFDLYFADPRSTLCKLILRD---ESPYYIKE 342

Query: 397 -------WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  + P         ++DG +    YS+  N
Sbjct: 343 NIFDNIQFYP--EYFSLLSERDGYSHLYWYSMGGN 375


>gi|289644829|ref|ZP_06476881.1| WD-40 repeat protein [Frankia symbiont of Datisca glomerata]
 gi|289505356|gb|EFD26403.1| WD-40 repeat protein [Frankia symbiont of Datisca glomerata]
          Length = 372

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 69/212 (32%), Gaps = 19/212 (8%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V+D D   +    P  +       +SP+ +++A    D      V + D  + R    +G
Sbjct: 50  VIDADDGVVVTEMPHHELGALAAAWSPDGRRLAVGGADG----TVVIGDLTVGRHDAVMG 105

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             +  + A  +S +G+            ++  +        R         + +++    
Sbjct: 106 --QGWVHALAWSPDGQYLA----AGRGREVLLLRPDGTIVTRWPGQPSTVTALTWA--GH 157

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++       G  + Y    + ++  R + D + S      +P     A          I 
Sbjct: 158 RLAVACY--GGIRWYEPGPDRTEPVR-TFDWKGSLLTIAVAPNARWAASGNQDAS---IH 211

Query: 375 VMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
           + +    ++  +    + + A  ++P  + L 
Sbjct: 212 LWRLWSGEDYEMSGYPAKVTAIAFAPDSQRLA 243



 Score = 36.9 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 23/165 (13%), Positives = 54/165 (32%), Gaps = 20/165 (12%)

Query: 216 EPRFSPNQQKVAYATYDDEDIL---------RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           EP +S +                        R  ++D         + +     LA  +S
Sbjct: 16  EPVWSIDLDDAVSTVTAAPRGPLVAAASLSGRTVVIDADDGVVVTEMPHHELGALAAAWS 75

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+R  +         +   DL     + +        + ++SPD   +     RE   
Sbjct: 76  PDGRRLAV---GGADGTVVIGDLTVGRHDAVM-GQGWVHALAWSPDGQYLAAGRGRE--- 128

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            + +++ +G+   R    + ++     W+  G  +A   + G ++
Sbjct: 129 -VLLLRPDGTIVTR-WPGQPSTVTALTWA--GHRLAVACYGGIRW 169


>gi|312199641|ref|YP_004019702.1| hypothetical protein FraEuI1c_5848 [Frankia sp. EuI1c]
 gi|311230977|gb|ADP83832.1| WD-40 repeat-containing protein [Frankia sp. EuI1c]
          Length = 1425

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 64/195 (32%), Gaps = 12/195 (6%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             F+P+   +A  + D++  L      +      + + +  + +++  FS +G       +
Sbjct: 1091 AFAPDSHALASGSDDNKIQLWNLADSSATAPVGETLTDVYNAVVSVAFSRDGHTLASGSE 1150

Query: 278  KDEAMD---IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                +      +          LT+      S ++S D   +      +G  +L+ + + 
Sbjct: 1151 GGLRLWDLTNPTAPAPLGDP--LTSD--DVTSVAFSRDGHTLA-GGFNDGTVRLWNLTNP 1205

Query: 335  GSDQKR--ISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDS 390
             +           + +     +S  G  +     +G   ++ +          + L    
Sbjct: 1206 SAPTPLGKPLPGSDDTVTSVAFSADGHTLVSGSDAGTIRRWNLTNPNAPTPLGKPLTSTD 1265

Query: 391  NLQAPTWSPSGRSLI 405
             + +  +SP G +L 
Sbjct: 1266 PVTSVAFSPDGHTLA 1280



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 71/228 (31%), Gaps = 19/228 (8%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FS +   +A  +   E  LR++ +      AP         + +  FS +G        
Sbjct: 1137 AFSRDGHTLASGS---EGGLRLWDLTNPTAPAPLGDPLTSDDVTSVAFSRDGHTLA-GGF 1192

Query: 278  KDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             D  + ++++      +   + L  +     S ++S D   +V  SD     +  +   N
Sbjct: 1193 NDGTVRLWNLTNPSAPTPLGKPLPGSDDTVTSVAFSADGHTLVSGSDAGTIRRWNLTNPN 1252

Query: 335  GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNL 392
                               +SP G  +A    +G      +            L     +
Sbjct: 1253 APTPLGKPLTSTDPVTSVAFSPDGHTLASGTETGTIRLWNLTNPTAPAPLGNPLTGTDWV 1312

Query: 393  QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             +  +SP G +L    +   D   +L+       N T    PA   +P
Sbjct: 1313 TSVAFSPDGDTLASGSR---DHTIQLW-------NLTNPTAPAPLGNP 1350



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 70/216 (32%), Gaps = 23/216 (10%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            S    +    FSP+   +A  +   +  LR++ +      AP         + A  FS++
Sbjct: 856  SSSGAVTSVAFSPDGHVLASGS---DGGLRLWNLTNPSAPAPLGRPLSSDAVTAVAFSTD 912

Query: 269  GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREG 324
            G     S   D  + ++S+     A + L +   IN SA    ++S D   +   S    
Sbjct: 913  GHTVA-SGSDDGTIRLWSL-TNPGAPKPL-DEPLINSSAVTAVAFSLDGHTLASGSV--- 966

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWS----PQGDLIAFTKFSGEKFAIGVMKKD- 379
               + +                    +PVWS      G  +A     G +    +     
Sbjct: 967  DHTIQLWNLTNHSAPISLGGPPIPVGNPVWSVAFASDGHTLASGSRDGVQL-WNLTNPTA 1025

Query: 380  ----GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                GS    +   +   +  +SP G +L      D
Sbjct: 1026 PAPLGSPLINVDATTAAASVAFSPDGHTLASGSDVD 1061



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 66/223 (29%), Gaps = 27/223 (12%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF---RSMILAPRFSSNGKRALI 274
             FS +   VA  + D      + L       APK +       S + A  FS +G     
Sbjct: 908  AFSTDGHTVASGSDDG----TIRLWSLTNPGAPKPLDEPLINSSAVTAVAFSLDGHTLA- 962

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--------REGKE 326
            S   D  + ++++    +A   L        +  +S     + F SD        R+G +
Sbjct: 963  SGSVDHTIQLWNL-TNHSAPISLGGPPIPVGNPVWS-----VAFASDGHTLASGSRDGVQ 1016

Query: 327  QLYVMQSNGS---DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGS 381
               +             I+ D   +     +SP G  +A          + +        
Sbjct: 1017 LWNLTNPTAPAPLGSPLINVDATTAAASVAFSPDGHTLASGSDVDTIQLWDLAKASAPAP 1076

Query: 382  QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              + L   + + +  ++P   +L      +      L      
Sbjct: 1077 LGKPLTSGTGVASVAFAPDSHALASGSDDNKIQLWNLADSSAT 1119



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 38/236 (16%), Positives = 77/236 (32%), Gaps = 37/236 (15%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALI 274
             FS     +A           + L D     AP  +G   +    + +  FS +G   ++
Sbjct: 821  AFSRVGHILA-----GGSENGIQLWDLTNSSAPAPLGRRLSSSGAVTSVAFSPDGH--VL 873

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +   D  + ++++    +A   L   L  +   + ++S D   +   SD +G  +L+ + 
Sbjct: 874  ASGSDGGLRLWNL-TNPSAPAPLGRPLSSDAVTAVAFSTDGHTVASGSD-DGTIRLWSLT 931

Query: 333  SNGSDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS- 390
            + G+ +        +S      +S  G  +A          I +         + +    
Sbjct: 932  NPGAPKPLDEPLINSSAVTAVAFSLDGHTLASGSVD---HTIQLWNLTNHSAPISLGGPP 988

Query: 391  -NLQAPTWSPSGRSLIFSRK-----KDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
              +  P WS     + F+            G +L+       N T    PA    P
Sbjct: 989  IPVGNPVWS-----VAFASDGHTLASGSRDGVQLW-------NLTNPTAPAPLGSP 1032



 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 47/132 (35%), Gaps = 16/132 (12%)

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             +T+   +  S +YSPD   +   SD     +L+ + +  +           +     +
Sbjct: 766 TVITSGSSV-ASVAYSPDGLTLASGSDAG--LRLWNVTNPRAPAPLGKPLSGDAVTAVAF 822

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQE-----RLLVEDSNLQAPTWSPSGRSLIFSRK 409
           S  G ++A     G +  I +     S       R L     + +  +SP G  L     
Sbjct: 823 SRVGHILA----GGSENGIQLWDLTNSSAPAPLGRRLSSSGAVTSVAFSPDGHVLA---- 874

Query: 410 KDGDTGSKLYSI 421
              D G +L+++
Sbjct: 875 SGSDGGLRLWNL 886


>gi|229019574|ref|ZP_04176390.1| TolB domain protein [Bacillus cereus AH1273]
 gi|229025815|ref|ZP_04182214.1| TolB domain protein [Bacillus cereus AH1272]
 gi|228735523|gb|EEL86119.1| TolB domain protein [Bacillus cereus AH1272]
 gi|228741740|gb|EEL91924.1| TolB domain protein [Bacillus cereus AH1273]
          Length = 384

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/230 (14%), Positives = 73/230 (31%), Gaps = 51/230 (22%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   + +T    + +  P++S N + +AYA     +   +Y +     +  K++   +S 
Sbjct: 16  GEKEKQITKG--EYITGPKWSHNGEWLAYAKGKKRNHFELYRL-----KDGKKVTPSQSE 68

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIV 317
               ++S                 + + D +      E + N +      ++ PD  +  
Sbjct: 69  ASNYQWSPTENIIAFIFTG----TLNTFDAEKKIADFENVANGVGDY---AWYPDGQRFF 121

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEAS---------------------YFDPVWSP 356
             S+       +     G+    I +D   +                          WSP
Sbjct: 122 VSSEAYLLPTGWT----GAQLYEIQKDANMNPHKMKHIYALPNEHDDFLALVASGFKWSP 177

Query: 357 QGDLIAF-----TKFSGEKFAIGVMKKDGS-----QERLLVEDSNLQAPT 396
               I+F       +S +   + +++ DGS      + LL       AP+
Sbjct: 178 DQKWISFLAVPTASWSADSNTLCLIRADGSRFENIDQMLLNTQWFKWAPS 227



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 10/85 (11%)

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +AF +       + +  K G +E+ + +   +  P WS +G  L +++ K      +LY
Sbjct: 2   KVAFIR----NHNLWI--KVGEKEKQITKGEYITGPKWSHNGEWLAYAKGKK-RNHFELY 54

Query: 420 SIDLNGRNETLINTPAYASDPQWVG 444
            +  +G+   +  + + AS+ QW  
Sbjct: 55  RLK-DGKK--VTPSQSEASNYQWSP 76


>gi|255080534|ref|XP_002503847.1| predicted protein [Micromonas sp. RCC299]
 gi|226519114|gb|ACO65105.1| predicted protein [Micromonas sp. RCC299]
          Length = 609

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/236 (13%), Positives = 81/236 (34%), Gaps = 30/236 (12%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K  +  +   G          D+ + +  F+ +  +   +++D +    + L DT   + 
Sbjct: 344 KIKIWDVHNTGK-CMRTYLGHDKAVKDINFTSDGARFVSSSHDKK----IKLWDTETGKV 398

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISAS 308
                + + M  A       +  L++ Q D    I   D+ +    +     L    + +
Sbjct: 399 ISTFTSGK-MAYAAVLHPEKQNILMAAQSD--KKIVQYDMNTGDVVQEYDQHLGAVNTVT 455

Query: 309 YSPDSSQIVFESD----REGKEQL-----YVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +  +  + V  SD    R  +  +     Y+   +      ++      +     S    
Sbjct: 456 FVDEGRRFVTTSDDKSMRVWEFGIPVVMKYIADPSMHSMPAVTLSPNQQWLACQ-SLDNQ 514

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           ++ ++  + ++F +       +++R +          P +SP GR L+ S   DG 
Sbjct: 515 IMIYS--AKDRFRLN------TKKRFVGHANGGYACQPNFSPDGRFLM-SGDADGK 561


>gi|154173936|ref|YP_001407553.1| outer membrane lipoprotein [Campylobacter curvus 525.92]
 gi|112803874|gb|EAU01218.1| outer membrane lipoprotein [Campylobacter curvus 525.92]
          Length = 224

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 55/129 (42%), Gaps = 17/129 (13%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFV-KVATNSA--NYSPVSIAFTKFV------- 56
           +   L + +  C + +L G    +S      KVA+     N + V+++  +F        
Sbjct: 3   LKNGLKLALAGCFIALLAGCATESSRTIEAPKVASFGTPYNGTKVAVSIGRFNNQSSYQN 62

Query: 57  -----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVL 111
                  D LG +   ++  DLQ+S  F+++ + +   K    +S    +  N  GA+ +
Sbjct: 63  GIFSDGEDRLGNQAQSILMTDLQQSGRFSVLDRTNM--KAIKEESAINKKAQNLKGAKYV 120

Query: 112 VTGRVIKEG 120
           +TG V + G
Sbjct: 121 ITGDVTEFG 129


>gi|52545538|emb|CAB53665.2| hypothetical protein [Homo sapiens]
          Length = 337

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 12/132 (9%)

Query: 284 IYSVDLQSNATE------RLTNTLF--INISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           I+++D  S +T       ++ +        S +++P   +++  S  +    + V   + 
Sbjct: 10  IWTLDPTSLSTRPSSGCAQVLSHPGHTPVTSLAWAPSGGRLLSASPVD--AAIRVWDVST 67

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                +   +     + +WSP G  I  T  S   F +   +     ER        Q  
Sbjct: 68  ETCVPLPWFRGGGVTNLLWSPDGSKILATTPSA-VFRVWEAQMWT-CERWPTLSGRCQTG 125

Query: 396 TWSPSGRSLIFS 407
            WSP G  L+F+
Sbjct: 126 CWSPDGSRLLFT 137



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 67/199 (33%), Gaps = 29/199 (14%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + L+      +    ++P+  ++  A+        + + D   +            +  
Sbjct: 27  AQVLSHPGHTPVTSLAWAPSGGRLLSAS---PVDAAIRVWDVSTETCVPLPWFRGGGVTN 83

Query: 263 PRFSSNGKRALIS----VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +S +G + L +    V +     +++        ER         +  +SPD S+++F
Sbjct: 84  LLWSPDGSKILATTPSAVFRVWEAQMWTC-------ERWPTLSGRCQTGCWSPDGSRLLF 136

Query: 319 ESDREGKEQLYVMQSN---GSDQKRISQDKEASYFDPVW-----SPQGDLIAFTKFSGEK 370
                G+  +Y +      G  +  +   K A+    +      +P G+     +  G +
Sbjct: 137 TV--LGEPLIYSLSFPERCGEGKGCVGGAKSATIVADLSETTIQTPDGE-----ERLGGE 189

Query: 371 FAIGVMKKDGSQERLLVED 389
               V    G +  +L++ 
Sbjct: 190 AHSMVWDPSGERLAVLMKG 208


>gi|291236706|ref|XP_002738279.1| PREDICTED: WD repeat-containing protein 69-like [Saccoglossus
           kowalevskii]
          Length = 424

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 60/184 (32%), Gaps = 14/184 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS    N+  + D             +  +     SPN + +A  ++D+       L + 
Sbjct: 122 VSASQDNTCKIWDLTTGEEITTLQGHEHAVSAIAVSPNGEIIASGSHDN----TCKLWNI 177

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFI 303
                   +      I+   F+      L +   D  + ++  D+Q+    RL +T L  
Sbjct: 178 ERGECSHTLTGHTDHIVCLEFN-KQSHLLSTGSLDTTVKLW--DVQTG---RLLHTILGY 231

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N + +++P   Q+ F         + + +             +      V+SP G L+  
Sbjct: 232 NAAMTFNPHGDQVAFG---GPDNNISIHEVKTGSCLSTLIGHDDMVSHIVYSPDGKLLVS 288

Query: 364 TKFS 367
               
Sbjct: 289 ASKD 292



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 81/256 (31%), Gaps = 18/256 (7%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQ 224
           T E+     R++  S       +   + V + D  N   L       + +       N  
Sbjct: 60  TAEEIAGKDRLITQSRKTELKRLLERILVANNDNNNFSVLNEFKGHIEAVTGICVMVNGD 119

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           K   A+ D+       + D         +      + A   S NG+    S   D    +
Sbjct: 120 KFVSASQDN----TCKIWDLTTGEEITTLQGHEHAVSAIAVSPNGEIIA-SGSHDNTCKL 174

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           ++++ +   +  LT      +   ++  S  +   S       + +         R+   
Sbjct: 175 WNIE-RGECSHTLTGHTDHIVCLEFNKQSHLL---STGSLDTTVKLWDVQTG---RLLHT 227

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                    ++P GD +AF        +I  +K       L+  D  +    +SP G+ L
Sbjct: 228 ILGYNAAMTFNPHGDQVAFGGPDN-NISIHEVKTGSCLSTLIGHDDMVSHIVYSPDGKLL 286

Query: 405 IFSRKKDGDTGSKLYS 420
           + + K   D   KL+ 
Sbjct: 287 VSASK---DKSCKLWD 299


>gi|171913338|ref|ZP_02928808.1| vegetatible incompatibility protein HET-E1 [Verrucomicrobium
           spinosum DSM 4136]
          Length = 770

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 108/334 (32%), Gaps = 53/334 (15%)

Query: 89  QKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
              T+P +   F       A       V+++G        RLW V     +      ++ 
Sbjct: 463 ANPTSPPAALAFS------ADSQQIAAVLEDG------SLRLWAVASGTPLDATSKETTT 510

Query: 149 ASWR----------KIAHTISDDI-YQSITG------EKGDFNSRILFVSES-------V 184
           AS            + AH  +  I    +T       E   F+ R+  V+ S       V
Sbjct: 511 ASLTAGPDGTFVVTRAAHRTTAAIPAWKLTHTYGGDAEPNRFSDRVNTVTFSLDGAKLAV 570

Query: 185 VSGIIKNSLCVM---DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            SG    S  V+      G  ++ L    +  +    FSP+  ++A    D        +
Sbjct: 571 GSGEPSRSGEVVVFETATGKPLQTLKDLHEDAVLSLAFSPDGARLASGAADK----IAKV 626

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    RA          +    F ++G+    S   D  +  + + L     +++    
Sbjct: 627 TDLTTGRATNTFEGHTHHVTGVAFRADGRVLA-SSGADGVVLTWDM-LAGERRKKIEGWT 684

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +  Y   S+ +V      G   + ++   G+  + I+   +        SP GDLI
Sbjct: 685 KEVTALQYIGSSNLLV---TSAGDNLVRIVNDEGTQIRSIANLPDY-VQAVASSP-GDLI 739

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                 GE  A+ V  +   +E  + + +    P
Sbjct: 740 I---AGGEDSALRVWDRTSGKELAVFQPAGTSPP 770


>gi|153807515|ref|ZP_01960183.1| hypothetical protein BACCAC_01795 [Bacteroides caccae ATCC 43185]
 gi|149129877|gb|EDM21089.1| hypothetical protein BACCAC_01795 [Bacteroides caccae ATCC 43185]
          Length = 719

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 47/160 (29%), Gaps = 33/160 (20%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-------YFDPVWSPQGDLI-- 361
           PD     +        Q+        ++  +  D   +       +    +SP G  +  
Sbjct: 30  PDGEY--YTQMNGEGTQIIKYSFKTGEKVEVVFDVNTARECDFKHFDSYQFSPDGQKLLI 87

Query: 362 ------AFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSRK 409
                  +         I  +K++            L +    Q P +SP G  + F R 
Sbjct: 88  ATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQVPVFSPDGTMIAFVRD 147

Query: 410 KDGDTGSKLY-----SIDLNGRNETLINTPAYASDPQWVG 444
            +      LY      +  +G+  ++IN       P WV 
Sbjct: 148 NNIFLVKLLYGNSESKVTEDGKQNSIIN-----GIPDWVY 182



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 64/185 (34%), Gaps = 45/185 (24%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-------MILAPRFSSNGKRAL 273
           P+ +   Y T  + +  ++     +     + + +  +          + +FS +G++ L
Sbjct: 30  PDGE---YYTQMNGEGTQIIKYSFKTGEKVEVVFDVNTARECDFKHFDSYQFSPDGQKLL 86

Query: 274 IS------VQKDEAMDIYSVDLQ--------SNATERLTNTLFINISASYSPDSSQIVFE 319
           I+       +       Y   L+        +N  ERL++         +SPD + I F 
Sbjct: 87  IATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDG-GPQQVPVFSPDGTMIAFV 145

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEAS---YFDPVW--------------SPQGDLIA 362
            D        V    G+ + ++++D + +      P W              S    +IA
Sbjct: 146 RD---NNIFLVKLLYGNSESKVTEDGKQNSIINGIPDWVYEEEFGFNRALEFSADNTMIA 202

Query: 363 FTKFS 367
           F +F 
Sbjct: 203 FIRFD 207



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 57/397 (14%), Positives = 124/397 (31%), Gaps = 91/397 (22%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F     ++ +  I  PD    +   N  G Q++   +   +  +++ V   
Sbjct: 9   DLKDITSGRFRP---ENIQGVIPTPDGE-YYTQMNGEGTQII---KYSFKTGEKVEV--- 58

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             ++  +    
Sbjct: 59  VFDVNTARECDFKHFDSYQFSPDGQKLLIATKTTPIYRHSYT-----AVHYIYPLKRNDK 113

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   +A+   ++     ++L+    
Sbjct: 114 GVTTNNIIERLSDGGPQQV-----------PVFSPDGTMIAFVRDNN-----IFLVKLLY 157

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +  ++                          A  FS++          +  +  YS  
Sbjct: 158 GNSESKVTEDGKQNSIINGIPDWVYEEEFGFNRALEFSADNTMIAFIRFDESEVPSYSFP 217

Query: 289 LQSNATERLTNTLFINISASY------SPDSSQIVFESD-REGKEQLYVMQSNG-SDQKR 340
           + +     +          +Y       P+S   V   D +    +   +  +      R
Sbjct: 218 IFAGQAPYINALKDYPGEYTYKYPKAGYPNSKVEVRTYDIKSHVTRTMKLPLDTDGYIPR 277

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---- 396
           I   K+AS            I       ++F +       +  +L++ D   ++P     
Sbjct: 278 IRFTKDASKLA---------IMTLNRHQDRFDLYFADPRSTLCKLVLRD---ESPYYIKE 325

Query: 397 -------WSPSGRSLIFS--RKKDGDTGSKLYSIDLN 424
                  + P      FS   ++DG +    YS+  N
Sbjct: 326 NIFDNIHFYPD----YFSMLSERDGYSHLYWYSMGGN 358


>gi|62087802|dbj|BAD92348.1| Notchless gene homolog variant [Homo sapiens]
          Length = 487

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 105 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 160

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEA------SYFDPVWS 355
            +S S+SPD  ++       G    Q+ +   +   Q   +    +      S+     +
Sbjct: 161 VLSISWSPDGKKLA-----SGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHAN 215

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + +     G  ER+L     ++    W   G  L++S  +D
Sbjct: 216 PECRYVASSSKDGS---VRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 268



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 342 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 398

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 399 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 457

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 458 ADEVYAVDWSPDGQRVA 474



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 133 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA---SGCKNGQILLWDPST 189

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ I+           LT  
Sbjct: 190 GKQVGRTLAGHSKWITGLSWEPLHANPECRYVA-SSSKDGSVRIWDT-TAGRCERILTGH 247

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 248 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 300



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 304 RTGAFEPAEASVNPQDLQGFLQELKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 360

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 361 AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 398

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 399 KLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAM 452

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 453 DLPGHADEVYAVDWSPDGQRVA 474


>gi|13471136|ref|NP_102705.1| adenylate cyclase [Mesorhizobium loti MAFF303099]
 gi|14021880|dbj|BAB48491.1| adenylate cyclase [Mesorhizobium loti MAFF303099]
          Length = 581

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 53/124 (42%), Gaps = 13/124 (10%)

Query: 38  VATNSANYSPVS----IAFTKFVSIDELGGK--VSEVVSKDL----QRSDVFNLISQDSF 87
           VA  SAN  P+     +A   F ++     +   S+ +++DL     RS    +I+++S 
Sbjct: 182 VAIASANDLPLPFKPSVAVLPFANMSADPEQEYFSDGITEDLITELSRSQSLFVIARNS- 240

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
              +    S+   +    LG + +V G V K G  R+R+  +L +      +  +++  S
Sbjct: 241 -SFVFKGRSVNTTEVGRKLGVRYVVEGSVRKAGA-RVRITAQLIEASSGNHVWAERYDRS 298

Query: 148 PASW 151
               
Sbjct: 299 IDDL 302


>gi|331268470|ref|YP_004394962.1| hypothetical protein CbC4_0285 [Clostridium botulinum BKT015925]
 gi|329125020|gb|AEB74965.1| hypothetical protein CbC4_0285 [Clostridium botulinum BKT015925]
          Length = 432

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 65/199 (32%), Gaps = 42/199 (21%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI------SASYSPDSSQIVF 318
           +S NGK  +          IY  D ++N    +T T+ I+       S  YS D  ++ F
Sbjct: 186 WSENGKYLI----GYRENKIYLYDAKNN----ITKTIKIDENKVFVESGMYSEDGKEVYF 237

Query: 319 E-------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV------------WSPQGD 359
                   +D   ++ ++      ++ K I         DP                 G 
Sbjct: 238 IGEQVKKGNDDFRRDGIFKANIETNEIKEILLLPYRKTTDPSSKESSLSCDNYKILDGGK 297

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW------SPSGRSLIFSRKKDGD 413
            I        K A+ +   +  +   LV+    +  ++      SP G  + +S K   +
Sbjct: 298 KIILCAIINGKSALYMYDVENKKFFTLVDTVETKHGSYGVSFSISPDGNKIAYSNKSKEN 357

Query: 414 T---GSKLYSIDLNGRNET 429
                  LY   +NG   T
Sbjct: 358 ADTNNGDLYVAKINGHRLT 376



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 99/300 (33%), Gaps = 52/300 (17%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD-------------IYQSIT 167
            D L  +    D+K +KQ + K +       + +   I+ D             IY  + 
Sbjct: 114 NDNLYGKLYKVDLKSQKQSLLK-YQGGYIQNKDVGDGIASDWKYINYDKNEKQYIYNLLD 172

Query: 168 GEK---GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-FSPNQ 223
           G++    D  +     +   + G  +N + + D      + +    +++  E   +S + 
Sbjct: 173 GKETMCNDSMNTKWSENGKYLIGYRENKIYLYDAKNNITKTIKIDENKVFVESGMYSEDG 232

Query: 224 QKVAYATYDDEDILR------VYLMDTRIDRAPKRIGNFRSMILAPR-----FSSN---- 268
           ++V +     +          ++  +   +   + +         P       S +    
Sbjct: 233 KEVYFIGEQVKKGNDDFRRDGIFKANIETNEIKEILLLPYRKTTDPSSKESSLSCDNYKI 292

Query: 269 ---GKRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFES 320
              GK+ ++    +    +Y  D+++     L     T      +S S SPD ++I + +
Sbjct: 293 LDGGKKIILCAIINGKSALYMYDVENKKFFTLVDTVETKHGSYGVSFSISPDGNKIAYSN 352

Query: 321 DR-----EGKEQLYVMQSNGSDQKRI------SQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                       LYV + NG     I           ++  + +W      I F K +G+
Sbjct: 353 KSKENADTNNGDLYVAKINGHRLTNIIIIDKNVNLGGSADREVLWGNNSKKIYFFKSNGD 412


>gi|189193987|ref|XP_001933332.1| F-box/WD repeat containing protein pof1 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187978896|gb|EDU45522.1| F-box/WD repeat containing protein pof1 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 511

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 81/316 (25%), Gaps = 70/316 (22%)

Query: 111 LVTGRVIKEGK----DRLRVEFRLWDVKDRKQIIG--------------KKFFSSPASWR 152
           ++      +G          E R+WD    KQI G              + +    A   
Sbjct: 187 VLAVSYSPDGSLLASGGYDNEVRIWDPNTGKQIGGALKGHTQFITSLSWEPYHLQEAGRP 246

Query: 153 KIAHTISD-----------DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
           ++A +  D            I  +++G KG         +  + +     ++ V D    
Sbjct: 247 RVASSSKDGTVRVWDAIGGRIDYALSGHKGSVTCVKWGGTGRIYTSSHDKTIKVWDAATG 306

Query: 202 NIRYLTPSRDQILFEPRFSPN------------------QQKVAYATYDDEDILR----- 238
            +          +     S +                  ++K+A A    E         
Sbjct: 307 TLINTLSGHAHWVNHLALSTDFVLRTSYHDHTRKVPSTPEEKLAKAKARFEKAATTNGEV 366

Query: 239 -------------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                        +        +   R+   +  I    FS +G     S   D  + ++
Sbjct: 367 VERLATASEDCTIILWTPLTSTKPVTRMTGHQKQINQVTFSPDGSLLA-SAAWDNHVKLW 425

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           S          L   +       +S DS  +   S       L V        K      
Sbjct: 426 SA-RDGKFLNTLRAHVGPVYMTCFSADSRLLASCSK---DTTLKVWDMRTGKLKEDLPGH 481

Query: 346 EASYFDPVWSPQGDLI 361
           +   F   WSP GD +
Sbjct: 482 KDQVFALDWSPDGDRV 497



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 57/182 (31%), Gaps = 13/182 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + SG    ++ + D D     +      + +    +SP+   +A   YD+E  +R++
Sbjct: 154 SSRMASGSGDKTVRIWDCDTGTPVHTLKGHSRWVLAVSYSPDGSLLASGGYDNE--VRIW 211

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSNATE 295
             +T         G+ +  I +  +        G+  + S  KD  + ++   +      
Sbjct: 212 DPNTGKQIGGALKGHTQ-FITSLSWEPYHLQEAGRPRVASSSKDGTVRVWDA-IGGRIDY 269

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L+          +    +  ++ S  +  + + V  +                     S
Sbjct: 270 ALSGHKGSVTCVKWG--GTGRIYTSSHD--KTIKVWDAATGTLINTLSGHAHWVNHLALS 325

Query: 356 PQ 357
             
Sbjct: 326 TD 327


>gi|160887032|ref|ZP_02068035.1| hypothetical protein BACOVA_05046 [Bacteroides ovatus ATCC 8483]
 gi|156107443|gb|EDO09188.1| hypothetical protein BACOVA_05046 [Bacteroides ovatus ATCC 8483]
          Length = 719

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 47/161 (29%), Gaps = 33/161 (20%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-------SYFDPVWSPQGDLI- 361
            PD     +        Q+        ++  +  D          ++    +SP G  + 
Sbjct: 29  MPDGEH--YTQMNADGTQIIKYSFKTGEKVEVIFDVNTTRECDFKNFDSYQFSPDGQKLL 86

Query: 362 -------AFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSR 408
                   +         I  +K++            L +    Q P +SP G  + F R
Sbjct: 87  IATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQVPVFSPDGTMIAFVR 146

Query: 409 KKDGDTGSKLY-----SIDLNGRNETLINTPAYASDPQWVG 444
             +      LY      +  +G+  ++IN       P WV 
Sbjct: 147 NNNIFLVKLLYGNSESQVTEDGKQNSVIN-----GIPDWVY 182



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 52/395 (13%), Positives = 119/395 (30%), Gaps = 87/395 (22%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F         + I     +P  + +  + A      +   +  +++ V   
Sbjct: 9   DLKDITSGRFRP-------ENIQGVIPMPDGEHYTQMNADGTQIIKYSFKTGEKVEV--- 58

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             ++  +    
Sbjct: 59  IFDVNTTRECDFKNFDSYQFSPDGQKLLIATKTTPIYRHSYT-----AVHYIYPLKRNDK 113

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   +A+   ++     ++L+    
Sbjct: 114 GVTTNNIIERLSDGGPQQV-----------PVFSPDGTMIAFVRNNN-----IFLVKLLY 157

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +  ++                          A  FS++          +  +  YS  
Sbjct: 158 GNSESQVTEDGKQNSVINGIPDWVYEEEFGFDRALEFSADNTLIAFIRFDESEVPSYSFP 217

Query: 289 LQSNATERLTNTLFINISASY------SPDSSQIVFESD-REGKEQLYVMQSN-GSDQKR 340
           + +    R+          +Y       P+S   V   D +    +   +  +      R
Sbjct: 218 VFAGQAPRIDALKDYPGEYTYKYPKAGYPNSKVEVRTYDIKSHVTRTMKLPLDADGYIPR 277

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---- 396
           I   K+A+            I       ++F +       +  +L++ D   ++P     
Sbjct: 278 IRFTKDANKLA---------IMTLNRHQDRFDLYFADPRSTLCKLILRD---ESPYYIKE 325

Query: 397 -------WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  + P         ++DG +    YS+  N
Sbjct: 326 NIFDNIQFYP--EYFSLLSERDGYSHLYWYSMGGN 358


>gi|237715518|ref|ZP_04545999.1| dipeptidyl peptidase IV [Bacteroides sp. D1]
 gi|229444227|gb|EEO50018.1| dipeptidyl peptidase IV [Bacteroides sp. D1]
          Length = 722

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 47/161 (29%), Gaps = 33/161 (20%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-------SYFDPVWSPQGDLI- 361
            PD     +        Q+        ++  +  D          ++    +SP G  + 
Sbjct: 32  MPDGEH--YTQMNADGTQIIKYSFKTGEKVEVIFDVNTTRECDFKNFDSYQFSPDGQKLL 89

Query: 362 -------AFTKFSGEKFAIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSR 408
                   +         I  +K++            L +    Q P +SP G  + F R
Sbjct: 90  IATKTTPIYRHSYTAVHYIYPLKRNDKGVTTNNIIERLSDGGPQQVPVFSPDGTMIAFVR 149

Query: 409 KKDGDTGSKLY-----SIDLNGRNETLINTPAYASDPQWVG 444
             +      LY      +  +G+  ++IN       P WV 
Sbjct: 150 NNNIFLVKLLYGNSESQVTEDGKQNSVIN-----GIPDWVY 185



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 52/395 (13%), Positives = 119/395 (30%), Gaps = 87/395 (22%)

Query: 72  DLQ--RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFR 129
           DL+   S  F         + I     +P  + +  + A      +   +  +++ V   
Sbjct: 12  DLKDITSGRFRP-------ENIQGVIPMPDGEHYTQMNADGTQIIKYSFKTGEKVEV--- 61

Query: 130 LWDVKDRKQIIGK---KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           ++DV   ++   K    +  SP   + +  T +  IY+             ++  +    
Sbjct: 62  IFDVNTTRECDFKNFDSYQFSPDGQKLLIATKTTPIYRHSYT-----AVHYIYPLKRNDK 116

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G+  N++     DG   +            P FSP+   +A+   ++     ++L+    
Sbjct: 117 GVTTNNIIERLSDGGPQQV-----------PVFSPDGTMIAFVRNNN-----IFLVKLLY 160

Query: 247 DRAPKRIGNFR------------------SMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +  ++                          A  FS++          +  +  YS  
Sbjct: 161 GNSESQVTEDGKQNSVINGIPDWVYEEEFGFDRALEFSADNTLIAFIRFDESEVPSYSFP 220

Query: 289 LQSNATERLTNTLFINISASY------SPDSSQIVFESD-REGKEQLYVMQSN-GSDQKR 340
           + +    R+          +Y       P+S   V   D +    +   +  +      R
Sbjct: 221 VFAGQAPRIDALKDYPGEYTYKYPKAGYPNSKVEVRTYDIKSHVTRTMKLPLDADGYIPR 280

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---- 396
           I   K+A+            I       ++F +       +  +L++ D   ++P     
Sbjct: 281 IRFTKDANKLA---------IMTLNRHQDRFDLYFADPRSTLCKLILRD---ESPYYIKE 328

Query: 397 -------WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                  + P         ++DG +    YS+  N
Sbjct: 329 NIFDNIQFYP--EYFSLLSERDGYSHLYWYSMGGN 361


>gi|167522487|ref|XP_001745581.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775930|gb|EDQ89552.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1890

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 70/210 (33%), Gaps = 24/210 (11%)

Query: 160  DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
            D I+     +    +  I    ++ +S     ++ + D    N + L            F
Sbjct: 1671 DHIHIYSCLKADVTSLSINPADDTFISTSQDKTMRLWDMRSPNCQGLMLLNSPDTLA-TF 1729

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTR-IDRAPKRIGNFRSMILAPRF-----SSNGKRAL 273
                +  A A     D   ++L D R   + P  +       ++  +     S +G R L
Sbjct: 1730 DATSKVFAVAV----DSRSIHLYDARKFHQGPFVVFQETLRDMSSSWTDISASPDGSRLL 1785

Query: 274  ISVQKDEAMDIYSVDLQSNATE-RL------TNTLFINISASYSPDSSQIVFESDREGKE 326
            +S  +      Y VD  S     +L      T      + AS+SPD       S +EGK 
Sbjct: 1786 VSTLQGVN---YVVDAYSGDVRSQLGKKQGSTGGSGEPMEASWSPDGRYAAVGS-KEGKV 1841

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             ++   +  S++  +            ++P
Sbjct: 1842 IMW--DAENSNRVAMLAGHHNPVSSVKFNP 1869



 Score = 43.9 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 52/150 (34%), Gaps = 16/150 (10%)

Query: 273  LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             IS  +D+ M ++  D++S   + L      +  A++   S       D      +++  
Sbjct: 1695 FISTSQDKTMRLW--DMRSPNCQGLMLLNSPDTLATFDATSKVFAVAVD---SRSIHLYD 1749

Query: 333  SNGSDQ------KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-----GS 381
            +    Q      +   +D  +S+ D   SP G  +  +   G  + +     D     G 
Sbjct: 1750 ARKFHQGPFVVFQETLRDMSSSWTDISASPDGSRLLVSTLQGVNYVVDAYSGDVRSQLGK 1809

Query: 382  QERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            ++            +WSP GR      K+ 
Sbjct: 1810 KQGSTGGSGEPMEASWSPDGRYAAVGSKEG 1839


>gi|158253610|gb|AAI54373.1| Excision repair cross-complementing rodent repair deficiency,
           complementation group 8 [Danio rerio]
          Length = 400

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 94/312 (30%), Gaps = 37/312 (11%)

Query: 111 LVTGRVI-KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           ++ GR +   G D + V + L +   + Q   K   +   S R + H  S +  Q    +
Sbjct: 53  VIDGRYMLSGGSDGVIVIYDLENNSKKPQYTCKAICTVGRSSRHV-HKFSVETVQWYLHD 111

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            G F S     +  V              DG             ++    SP  +K +  
Sbjct: 112 TGMFVSSSFDKTMKVWDAETLKPADEFQFDG------------NVYCHHMSPIARKHSLV 159

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
               +D  +V L D +       +   R  IL+ R+S   +  L +   D  + I+ V  
Sbjct: 160 AVGTKDP-KVQLCDLKSGSRIHILQGHRGEILSVRWSPRYEHILATASTDSRVRIWDVRR 218

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            S +   L         AS           +   G+       ++G     ++       
Sbjct: 219 ASGSLFTLDQHNGDKSKAS------SEAVNTAHNGRVNGLCFTADG--LHLLTTGT---- 266

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIG---VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                     +  +   +GE   +    V+ +     +  V         + P G S+  
Sbjct: 267 -------DDRMRLWNSGTGENTLVNYGKVVNESRKGLKFTVSRGCSPEFVFVPCGSSVAV 319

Query: 407 SRKKDGDTGSKL 418
                G+  + L
Sbjct: 320 YGLHSGELITML 331


>gi|149018551|gb|EDL77192.1| acylpeptide hydrolase, isoform CRA_b [Rattus norvegicus]
          Length = 757

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 53/131 (40%), Gaps = 17/131 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------DDEDILRVYL 241
             +++L  +D  G     L+      +  PR SP+Q ++ Y  Y           L +Y 
Sbjct: 302 NRRSALFYVDLSGGKCELLSDG-SLAICSPRLSPDQCRIVYLQYPCLAPHHQCSQLCLYD 360

Query: 242 MDTRI-----DRAPKRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQS 291
             T++     D  P+++G   S I         +S++ +R +    +    D+++VD Q+
Sbjct: 361 WYTKVTSVVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFAVDTQT 420

Query: 292 NATERLTNTLF 302
            +   LT    
Sbjct: 421 GSITSLTAAGS 431



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 59/187 (31%), Gaps = 29/187 (15%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDIL----------RVYL 241
           LCV+D D  NI  L    + +      ++P    V +  +  E                 
Sbjct: 249 LCVLDIDSGNISVLEGVPENVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRYCTNRRSALF 308

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNA--- 293
                    + + +    I +PR S +  R +       A       +   D  +     
Sbjct: 309 YVDLSGGKCELLSDGSLAICSPRLSPDQCRIVYLQYPCLAPHHQCSQLCLYDWYTKVTSV 368

Query: 294 -----TERLTNT-LFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                  +L  +   I  S      +S DS ++VF+S +  ++ L+ + +       ++ 
Sbjct: 369 VVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFAVDTQTGSITSLTA 428

Query: 344 DKEASYF 350
              A  +
Sbjct: 429 AGSAGSW 435


>gi|72393257|ref|XP_847429.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|62175148|gb|AAX69296.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70803459|gb|AAZ13363.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 638

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 67/232 (28%), Gaps = 31/232 (13%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ--QKVAYATYDDEDILRVY 240
            + S     ++ + D      R +       +     S +   +  A+     +   R  
Sbjct: 416 RIYSSSQDRTIIIWDSSNGAPRSVLRGHAHWVNFIALSTDLVIRTGAFDHECRKFDTREE 475

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +      R    +              +G+  L+S   D  M ++S   Q     R+T  
Sbjct: 476 MQQYATARYQDVLARL-----------DGRERLVSCSDDNTMFLWSPQRQVTPLGRMTGH 524

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   +SPD + I   S     + + +  ++        +   A+ +   WS    L
Sbjct: 525 QGAIFHIQFSPDGTMIASSS---ADKSVKLWNASDGKFITTFRGHVAAVYHVSWSLDSRL 581

Query: 361 IAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +  +        +        V    G  + +   D       WSP G+ + 
Sbjct: 582 LV-SGSRDSTLKLWSVSKRELVEDLSGHSDEIFSTD-------WSPDGQRVA 625



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 57/195 (29%), Gaps = 20/195 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +    FSP+ + +A           + L D       + +    S +    +S
Sbjct: 266 LDGHSEAVLIVSFSPDGELLA----TGGGDKEIRLWDVHTLTPTEELKGHTSWVQVLSWS 321

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSP-----DSSQIVFE 319
            +GK    S  KD ++ ++S + +S   +  R           S+ P       ++ V  
Sbjct: 322 PDGKYLA-SGSKDGSLIVWSGNGESGKYKGARHKAHSAYLTHVSWEPLHVNSSCNRFVSA 380

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S    K+    +    +  +      +A      W  +G    ++        I      
Sbjct: 381 S----KDTTLKVWHTVTGLQFSLSGHQAGVTCVKWGGEGR--IYSSSQDRTIIIW--DSS 432

Query: 380 GSQERLLVEDSNLQA 394
               R ++       
Sbjct: 433 NGAPRSVLRGHAHWV 447



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP G+L+A T    ++  +  +      E L    S +Q  +WSP G+ L       G
Sbjct: 277 SFSPDGELLA-TGGGDKEIRLWDVHTLTPTEELKGHTSWVQVLSWSPDGKYLA-----SG 330

Query: 413 DTGSKLYSIDLNGR 426
                L     NG 
Sbjct: 331 SKDGSLIVWSGNGE 344



 Score = 39.6 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 98/303 (32%), Gaps = 42/303 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           DD+  S+ G++ +      F+    V+  ++++L    RD      L   R       R 
Sbjct: 174 DDLLNSMIGKEAEGTPYAFFIGGEQVNDSVRDTLFQKQRDDYVDTMLKEGR-------RV 226

Query: 220 SP-NQQKVAY-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            P + +K+ +     A  + +   +       + R   ++      +L   FS +G+   
Sbjct: 227 RPQDVEKLTFELPEEAVVEIQFKPQAKFKVRPVTRCSGKLDGHSEAVLIVSFSPDGELLA 286

Query: 274 ISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                    +I   D+ +   TE L          S+SPD   +   S ++G   ++   
Sbjct: 287 ---TGGGDKEIRLWDVHTLTPTEELKGHTSWVQVLSWSPDGKYLASGS-KDGSLIVWSGN 342

Query: 333 SNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---- 387
                 K       ++Y   V W P          S  +F              +     
Sbjct: 343 GESGKYKGARHKAHSAYLTHVSWEP-----LHVNSSCNRFVSASKDTTLKVWHTVTGLQF 397

Query: 388 ----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
                 + +    W   GR  I+S  +  D    ++    NG   +++   A+     WV
Sbjct: 398 SLSGHQAGVTCVKWGGEGR--IYSSSQ--DRTIIIWD-SSNGAPRSVLRGHAH-----WV 447

Query: 444 GFM 446
            F+
Sbjct: 448 NFI 450


>gi|20089398|ref|NP_615473.1| surface antigen gene [Methanosarcina acetivorans C2A]
 gi|19914295|gb|AAM03953.1| surface antigen gene [Methanosarcina acetivorans C2A]
          Length = 482

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/273 (15%), Positives = 95/273 (34%), Gaps = 20/273 (7%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           D++    +   +    +    + V+D    NI    P           +P   KV  A+ 
Sbjct: 50  DYDQGGYYYDMNYNGTVPTPYVAVIDTATNNITARVPLGGGWPVGVAVNPRGTKVYVASA 109

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
             +++  VY++DT  +    ++    S      F+  G R  ++ Q+D   DI  ++  +
Sbjct: 110 TIDNVCIVYVIDTAANTVNAKVNIESSYPSGITFNPAGTRVYVTKQRD-NTDISVINTAT 168

Query: 292 NATERLTNTLFINISAS-----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           N          I +  S     ++PD  +I   +       +Y + +  +         +
Sbjct: 169 NTLM-----APIIVEPSTYSIAFTPDEKKIYATNTF--NNTIYAIDAATNKVTANISVGD 221

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           + Y + V +P G  +    +     ++     D     + V +S       S  G  +  
Sbjct: 222 SPY-EGVVTPDGKKVYVPNYDSNTVSVINTDMDNVIATVPVGNSPNLVAVTS-DGNKVYV 279

Query: 407 SRKK-----DGDTGSKLYSIDLNGRNETLINTP 434
           +        D  T + + ++ +   +  ++ +P
Sbjct: 280 ANNNTVSVIDTATDNVISTVPVGTYSSKIVVSP 312


>gi|332187980|ref|ZP_08389712.1| hypothetical protein SUS17_3103 [Sphingomonas sp. S17]
 gi|332011981|gb|EGI54054.1| hypothetical protein SUS17_3103 [Sphingomonas sp. S17]
          Length = 479

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 43/146 (29%), Gaps = 8/146 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A  +     +  +    T   +    +G          F+ +GK   ++V+ 
Sbjct: 89  FSPDGKTLAVVSIGSNAVSWIDT-ATNTVKHTTYVGRSPHEAF---FTPDGKEVWVTVR- 143

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                I  +D  +        T        +SPD       S       L V       Q
Sbjct: 144 -GEDYIAVLDPTTYKETGRIKTPGGPGMTIFSPDGRYGYVCSSF--NPVLAVFDVATHAQ 200

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFT 364
                       +   +P G  + FT
Sbjct: 201 VGQVAQPSPFCPNIAATPDGKQVWFT 226



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 73/222 (32%), Gaps = 14/222 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+ ++V + T   ED + V    T  +    +      M +   FS +G+   +    
Sbjct: 131 FTPDGKEV-WVTVRGEDYIAVLDPTTYKETGRIKTPGGPGMTI---FSPDGRYGYVCSS- 185

Query: 279 DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                +   D+ +     ++        + + +PD  Q+ F     GK   +  +   + 
Sbjct: 186 -FNPVLAVFDVATHAQVGQVAQPSPFCPNIAATPDGKQVWFTLKDIGKTVAFDARPPFAI 244

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            K +      ++ +   + +G   A+    GE   + V +         +    +    W
Sbjct: 245 LKVLDTGPITNHVNFARTAKGQF-AYVTVGGEN-VVKVFRTSDFTPVATIPVGKMPHGVW 302

Query: 398 -SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            S  GR +        +   +L +ID  G           A 
Sbjct: 303 PSGDGRRVY----VGLENSDELAAIDTAGNTVVATVPVGQAP 340



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 35/96 (36%), Gaps = 6/96 (6%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +   S   G   +  + +  +  K  +    + +    ++P G  + +    G
Sbjct: 89  FSPDGKTLAVVSI--GSNAVSWIDTATNTVKHTTYVGRSPHEAF-FTPDGKEV-WVTVRG 144

Query: 369 EKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRS 403
           E + I V+     +E   +          +SP GR 
Sbjct: 145 EDY-IAVLDPTTYKETGRIKTPGGPGMTIFSPDGRY 179


>gi|310793186|gb|EFQ28647.1| WD domain-containing protein [Glomerella graminicola M1.001]
          Length = 600

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 67/193 (34%), Gaps = 13/193 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTR-IDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           RFS + + VA        I  V   +   + +           I +  FS +GK    + 
Sbjct: 304 RFSHDGKYVATGCNRSAQIYDVQSGEKLCVLQDDTVDITGDLYIRSVCFSPDGKYLA-TG 362

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +D+ + ++  D+QS       +    +  S  ++ D   I   S   G   + +     
Sbjct: 363 AEDKLIRVW--DIQSRQIRNTFSGHEQDIYSLDFARDGRTIASGS---GDRTVRLWDIEQ 417

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN---L 392
                ++   E        SP    +A      +   +  + +    ERL   D +   +
Sbjct: 418 GTNT-LTLTIEDGVTTVAISPDTKYVAAGSLD-KSVRVWDIHQGYLLERLEGPDGHKDSV 475

Query: 393 QAPTWSPSGRSLI 405
            +  +SP+GR L+
Sbjct: 476 YSVAFSPNGRDLV 488


>gi|295666432|ref|XP_002793766.1| dipeptidyl-peptidase [Paracoccidioides brasiliensis Pb01]
 gi|226277419|gb|EEH32985.1| dipeptidyl-peptidase [Paracoccidioides brasiliensis Pb01]
          Length = 711

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/284 (13%), Positives = 85/284 (29%), Gaps = 65/284 (22%)

Query: 203 IRYLTPSRDQILFEPR----FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI----G 254
            + L+ +R      PR    +   +    ++    +     Y+ D ++      +     
Sbjct: 148 PKQLSSARIYDSLWPRHWDTWLTTEFNAVFSGSLKKGFGGKYIFDGKLKNLVAPVKYAES 207

Query: 255 NFRSMILAPRF--SSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTL---- 301
            +    ++  +  S +GK      +  E          IY V     +T    N      
Sbjct: 208 PYPPFGVSSDYDLSPDGKTVAFMSKAPELPKANYTTSYIYVVPHDGASTAVPINGPDSSV 267

Query: 302 ------FINISASYSPDSSQIVF--------ESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                   + +  +SPDS ++ +        ESDR     +YV   +      I+ + + 
Sbjct: 268 AADGIVGASSNPVFSPDSKKLAYFQMEEYNYESDR---RVIYVATLSNKKIVSIASNWDR 324

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS----------------------QERL 385
           S     W+P G           +  +  +  +                           +
Sbjct: 325 SPESIKWTPDGANFYILSEDRARSRLFTLPVNAGTDYVPINFTDNGMVSAFHFLNNSPSV 384

Query: 386 LVEDSNLQAPTW----SPSGR-SLIFSRKKDGDTGSKLYSIDLN 424
           L   S L + +     +P G+  ++FS  +     + L   D++
Sbjct: 385 LTTTSTLWSNSIYAIVAPDGKPKVLFSANEHDPELAGLGPEDID 428



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/249 (14%), Positives = 86/249 (34%), Gaps = 34/249 (13%)

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
            +     +I +      +  W +     + +G + K    +      ++D K +  +   
Sbjct: 148 PKQLSSARIYDSLWPRHWDTWLTTEFNAVFSGSLKKGFGGKY-----IFDGKLKNLVAPV 202

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           K+  SP         +S D   S  G+   F S+     E   +    + + V+  DGA+
Sbjct: 203 KYAESPYP----PFGVSSDYDLSPDGKTVAFMSK---APELPKANYTTSYIYVVPHDGAS 255

Query: 203 IRYLTPSRDQIL---------FEPRFSPNQQKVAYATYD----DEDILRVYLMDTRIDRA 249
                   D  +           P FSP+ +K+AY   +    + D   +Y+      + 
Sbjct: 256 TAVPINGPDSSVAADGIVGASSNPVFSPDSKKLAYFQMEEYNYESDRRVIYVATLSNKKI 315

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
                N+     + +++ +G    I  +      ++++ + +      T+ + IN    +
Sbjct: 316 VSIASNWDRSPESIKWTPDGANFYILSEDRARSRLFTLPVNAG-----TDYVPIN----F 366

Query: 310 SPDSSQIVF 318
           + +     F
Sbjct: 367 TDNGMVSAF 375



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 25/126 (19%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVEDSNLQA- 394
                   D   SP G  +AF   + E          I V+  DG+   + +   +    
Sbjct: 209 YPPFGVSSDYDLSPDGKTVAFMSKAPELPKANYTTSYIYVVPHDGASTAVPINGPDSSVA 268

Query: 395 ----------PTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDP- 440
                     P +SP  + L + + ++ +  S    +Y   L+ +    I +  +   P 
Sbjct: 269 ADGIVGASSNPVFSPDSKKLAYFQMEEYNYESDRRVIYVATLSNKKIVSIASN-WDRSPE 327

Query: 441 --QWVG 444
             +W  
Sbjct: 328 SIKWTP 333



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 45/152 (29%), Gaps = 37/152 (24%)

Query: 310 SPDSSQIVFESDREGKEQ-------LYVMQSNGSDQKRISQDKE---------ASYFDPV 353
           SPD   + F S      +       +YV+  +G+         +          +  +PV
Sbjct: 221 SPDGKTVAFMSKAPELPKANYTTSYIYVVPHDGASTAVPINGPDSSVAADGIVGASSNPV 280

Query: 354 WSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIF 406
           +SP    +A+ +     +      I V      +   +  + +    +  W+P G     
Sbjct: 281 FSPDSKKLAYFQMEEYNYESDRRVIYVATLSNKKIVSIASNWDRSPESIKWTPDG----- 335

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                    +  Y +  +     L   P  A 
Sbjct: 336 ---------ANFYILSEDRARSRLFTLPVNAG 358


>gi|237719713|ref|ZP_04550194.1| peptidase [Bacteroides sp. 2_2_4]
 gi|229450982|gb|EEO56773.1| peptidase [Bacteroides sp. 2_2_4]
          Length = 747

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 77/239 (32%), Gaps = 36/239 (15%)

Query: 146 SSPASWRK---IAHTISDD-IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
            +   +R+   +    S   +Y S         +   +  ++   G +     ++D D  
Sbjct: 23  GTVEDYRRAYSLGSKFSAKKVYYSNVNPNWIQGTHSFWYVKNTEQGPL---YVIVDADTQ 79

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             + L   +  I+   R S   Q +            VYL     D +P  +        
Sbjct: 80  TRKELFDHQKMIVHLNRIS--GQGI--------KANAVYLEQLSFDHSPNVL-------- 121

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
             RF   GKR   ++  D   +       S     +        +  +SPD     +   
Sbjct: 122 --RFVFRGKRWQYTISSDLLEEKDYAQAPSRQRHWMDRDDEKVAAPVFSPDHKYKAYIK- 178

Query: 322 REGKEQLYVMQSNGSDQKRISQDKE-ASYFDP--VWSPQGDLIAFTKFSG--EKFAIGV 375
               + +YV ++    ++++S D    +Y+     WSP    +A  K     +++   V
Sbjct: 179 ---NDNIYVQEAATGKERQLSFDGTLGNYYSAYIRWSPDSKKVASCKIRPVEKRYVYYV 234



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/356 (11%), Positives = 107/356 (30%), Gaps = 67/356 (18%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHT----ISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
                 +  K +  +P+  R         ++  ++      K    +  ++V E+     
Sbjct: 133 TISSDLLEEKDYAQAPSRQRHWMDRDDEKVAAPVFSPDHKYKAYIKNDNIYVQEAATGKE 192

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----------YATYDDEDI-- 236
            +     +  DG          +      R+SP+ +KVA          Y  Y +     
Sbjct: 193 RQ-----LSFDG-------TLGNYYSAYIRWSPDSKKVASCKIRPVEKRYVYYVESSPAD 240

Query: 237 ----------------------LRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRAL 273
                                   +Y ++T     P+  + + +  +    ++++ +   
Sbjct: 241 QLQPKLHKQEYAKPGDELPFRVPCIYEVETGRSIIPETALFDRQYELTGLMWNTDSRALT 300

Query: 274 ISVQKDEA--MDIYSVDLQSNATERL---TNTLFINISASYSPD---SSQIVFESDREGK 325
               +       +  +  ++     L   T+  ++N S  +  D     ++++ S+R+  
Sbjct: 301 FEYNQRGHQIYRVLELSAETGTVRALVEETSDKYVNYSRRFRHDLKDGKRMIWMSERDNW 360

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKK 378
             LY+     +   R     E    + +   +     +   +G +            +  
Sbjct: 361 NHLYMYDRATAQPVRQITKGEWYVREVLRVDEERQQIYFSANGMRKGEDPYLIHYYRIDF 420

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLI-FSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +G +   L  +  +    +S     L+      D    + L ++  NG+    + T
Sbjct: 421 EGKKLVCLTPEEGMHKAWFSDDMNYLVDVYSMVDKAPVAVLRNVSDNGKVVMPLET 476


>gi|21229721|ref|NP_635638.1| dipeptidyl anminopeptidase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66766598|ref|YP_241360.1| dipeptidyl anminopeptidase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|21111208|gb|AAM39562.1| dipeptidyl anminopeptidase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66571930|gb|AAY47340.1| dipeptidyl anminopeptidase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 697

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 62/165 (37%), Gaps = 9/165 (5%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINI-SASYSPDSSQIVFE 319
           + R S +GK        D  ++++   + + +    +T      I S  ++  S  +++ 
Sbjct: 61  SVRISPDGKYLSWVAPLDGVLNVWVAPVDAPDKARAITKDTARGIRSYYWTYHSDTLLYL 120

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIG 374
            D  G E   LY +  +    K ++  K+ +      S   P   ++       +   + 
Sbjct: 121 RDTGGDEDFHLYAVNLSDGSSKDLTPFKKTNAEVYGISDQHPDAIMVGMNDRDAKWHDLY 180

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKL 418
            ++   S  R LV+ +     ++   G   L ++ +   D G +L
Sbjct: 181 KVELA-SGTRTLVQKNTDSLDSYLLDGNYQLRYATRATDDAGREL 224



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 4/92 (4%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDS--NLQAPTWSPSG 401
                     SP G  +++         + V   D   + R + +D+   +++  W+   
Sbjct: 55  GNPERASVRISPDGKYLSWVAPLDGVLNVWVAPVDAPDKARAITKDTARGIRSYYWTYHS 114

Query: 402 RSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
            +L++ R   GD    LY+++L +G ++ L  
Sbjct: 115 DTLLYLRDTGGDEDFHLYAVNLSDGSSKDLTP 146


>gi|328550528|ref|NP_001126371.1| WD repeat-containing protein 1 [Pongo abelii]
 gi|55731238|emb|CAH92333.1| hypothetical protein [Pongo abelii]
          Length = 606

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/244 (14%), Positives = 72/244 (29%), Gaps = 55/244 (22%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   +++P+   +A  + D    LR++    +          F   I    +
Sbjct: 53  IYTEHAHQVVVAKYAPSGFYIA--SGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAW 110

Query: 266 SSNGKRALISVQK--------------------DEAMDIYSVDLQSNATERLTNTLFINI 305
           + + KR  +  +                          + SVD++ +   RL      N 
Sbjct: 111 TEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVVNSVDIKQSRPYRLATGSDDNC 170

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A +             EG    +              D         +SP G+  A   
Sbjct: 171 AAFF-------------EGPPFKFKFTIG---------DHSRFVNCVRFSPDGNRFATAS 208

Query: 366 FSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G    I +      ++          D  + A +WSP    L+      GD  SK++ 
Sbjct: 209 ADG---QIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLL---SASGDKTSKIWD 262

Query: 421 IDLN 424
           +++N
Sbjct: 263 VNVN 266



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 95/294 (32%), Gaps = 48/294 (16%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTE----HAHQVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 65  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIA--------------- 109

Query: 171 GDFNSRILFVSESVVSGIIKNSLC-----VMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
              +S+ + V            L      V +  G N   +  S D     P        
Sbjct: 110 WTEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHN--KVVNSVDIKQSRPYRLATGSD 167

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
              A + +    +              IG+    +   RFS +G R   +   D    IY
Sbjct: 168 DNCAAFFEGPPFKFKFT----------IGDHSRFVNCVRFSPDGNRFA-TASADG--QIY 214

Query: 286 SVDLQSNATE-RLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             D ++      L  +   +      S+SPDS+ ++  S  +   +++ +  N 
Sbjct: 215 IYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLLSASG-DKTSKIWDVNVNS 267


>gi|327350052|gb|EGE78909.1| eukaryotic translation initiation factor 2A [Ajellomyces
           dermatitidis ATCC 18188]
          Length = 730

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 57/164 (34%), Gaps = 15/164 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++  S   + +L ++  +G     +   ++  + +  +SPN ++             +
Sbjct: 247 VDKTGKSYYGETTLYLLSANGGFDSRIDLDKEGPIHDVTWSPNSKEFGVVYGYMPAKTTI 306

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  LAPR    FS NG+  +++   + A  +   DL  + T+
Sbjct: 307 FNN---------RAVATHSFALAPRNTIIFSPNGRFVVVAGFGNLAGQMDIYDLDKDYTK 357

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSD 337
             T          +SPD   I     S R   +    +   G  
Sbjct: 358 IATIEASNASVCEWSPDGKFILTATTSPRLRVDNGVRIWHVGGG 401



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 17/128 (13%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-- 381
           G+  LY++ +NG    RI  DKE    D  WSP                 G M    +  
Sbjct: 256 GETTLYLLSANGGFDSRIDLDKEGPIHDVTWSPNSKEFGVV--------YGYMPAKTTIF 307

Query: 382 QERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAY 436
             R +   S   AP     +SP+GR ++ +   +      +Y +D +  +  T+  + A 
Sbjct: 308 NNRAVATHSFALAPRNTIIFSPNGRFVVVAGFGNLAGQMDIYDLDKDYTKIATIEASNAS 367

Query: 437 ASDPQWVG 444
             +  W  
Sbjct: 368 VCE--WSP 373



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 63/181 (34%), Gaps = 20/181 (11%)

Query: 256 FRSMILAPRFSSNGKRALISVQKD---------EAMDIYSVDLQSNATERL-TNTLFINI 305
           F+   +  ++++ G   ++  Q D             +Y +        R+  +      
Sbjct: 223 FKGDKVQLKWNNTGTTLIVLAQTDVDKTGKSYYGETTLYLLSANGGFDSRIDLDKEGPIH 282

Query: 306 SASYSPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             ++SP+S +  V       K  ++  ++  +    +     A     ++SP G  +   
Sbjct: 283 DVTWSPNSKEFGVVYGYMPAKTTIFNNRAVATHSFAL-----APRNTIIFSPNGRFVVVA 337

Query: 365 KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYS 420
            F      + +   D    ++   E SN     WSP G+ ++ +        D G +++ 
Sbjct: 338 GFGNLAGQMDIYDLDKDYTKIATIEASNASVCEWSPDGKFILTATTSPRLRVDNGVRIWH 397

Query: 421 I 421
           +
Sbjct: 398 V 398


>gi|326436152|gb|EGD81722.1| WD-40 repeat protein [Salpingoeca sp. ATCC 50818]
          Length = 1301

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 68/194 (35%), Gaps = 21/194 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+ + + +  A+ D        + D    +    +      +     S N K   ++  K
Sbjct: 80  FASDGRTIISASADT----LAKIWDLPSGKCLHTLTGHTDAVTCAAISQNVKF-AVTGSK 134

Query: 279 DEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           D    ++  ++++ A E +     T    + +S + +PD+  ++  S+      + + + 
Sbjct: 135 DGTARVW--NVETGACETVIKQANTAGRAV-LSINITPDAKHVILGSN---TGTVSIHER 188

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSN 391
            G       +    +      SP G  I  +        I V   D +    ++     +
Sbjct: 189 QGGALVAKLEGHAEAVLGIAVSPNGAFIISSSEDKT---IRVWDADTTVCLRKMTGHGGS 245

Query: 392 LQAPTWSPSGRSLI 405
           + A   SP G+ ++
Sbjct: 246 VNAVVVSPDGQFIV 259



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 70/244 (28%), Gaps = 25/244 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ V D D              +     SP+ Q +   + D+     + +    
Sbjct: 218 SSSEDKTIRVWDADTTVCLRKMTGHGGSVNAVVVSPDGQFIVSGSKDE----TIKVWSLA 273

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + +      I     + +G   ++S   D+ + ++S        + L     + +
Sbjct: 274 TGDCLRSMKGHVDDIYDVAITHDG-LFVVSASNDDTVRVWSF-HTGACLQVLRGHTDVVL 331

Query: 306 SASYSPDSSQIVFESDREGKEQLY-------VMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           S + SP    IV      G  +L+       V       ++R+     AS      S + 
Sbjct: 332 SVAVSPGGWHIV----SGGGTKLHLKDTSVRVWSLATGARQRVLHGHTASVKAVAVSQRS 387

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGS 416
           DL+      G      V            +           SP      F+     DT  
Sbjct: 388 DLVVSASNDGTA---KVWDLATGACVHTFDGHTDYVRGVALSPDDS---FTVTGSCDTTV 441

Query: 417 KLYS 420
           +++ 
Sbjct: 442 RVWD 445



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 55/173 (31%), Gaps = 11/173 (6%)

Query: 181 SESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           S+++ SG   +++ +    DGA   +        +      P    +  A+ D      V
Sbjct: 471 SKTIASGGWDSTIKLWSWPDGA-CTHTLQGHGGKILALSLGPTPTTLLSASED----CTV 525

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + +    R    +      +     + +GK  ++S   D ++ ++ +D+      +L  
Sbjct: 526 KMWEMNTGRCSLTLEGHTDAVNGAVATPDGKF-VVSGSDDGSLVLWDLDMGGAPVRKLLG 584

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                 S   S D   ++  S     +   V      +  R +  +       
Sbjct: 585 HAGRVYSVDVSRDGKYLLSGS---WDKTAKVWDLQSGECLR-TFGEHGDRVRC 633


>gi|310796929|gb|EFQ32390.1| ribosome assembly protein 4 [Glomerella graminicola M1.001]
          Length = 450

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 90/276 (32%), Gaps = 31/276 (11%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
               +        H IS  I    T +   F+  +L+V +            V D     
Sbjct: 189 SVAVTTEHLDDGTHRISKMI--PTTHDMVHFDKPVLYVVD-----------WVNDSSPGA 235

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R++        +   FSP+ Q +A     +    RV ++ +   +    + +    +  
Sbjct: 236 RRFMLQWHGIRPY--SFSPDGQLLAIKGVRN----RVEIVTSARGQGYSVLRSHTDEVTH 289

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESD 321
             F+ +G R + ++ +D  + + SV+       ++        +  + SP     V  + 
Sbjct: 290 AEFTVDGARLV-TMSRDGTLRVSSVE-SGRNIAKIEMEHWRNPLQLAVSPTG---VIATI 344

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 ++  ++   +   +   + +       SP    +A+    G      V      
Sbjct: 345 WGRAVTIWDYETGAMNSYNLEIARGSEGVPLAISPDLRWVAYRSDDGAD----VTDLATG 400

Query: 382 QERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +      +E     +  +S +G+ L+  R  +G  G
Sbjct: 401 KVVYSARLESGFAVSAAFSGNGKYLVVGRCMNGHHG 436


>gi|225446777|ref|XP_002278499.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 405

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 54/143 (37%), Gaps = 19/143 (13%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            R + +   D    ++SV++    +   +L+         S+SPD  Q++     E    
Sbjct: 111 NRVIWTTSNDG---VFSVNVNGGVSLKHKLSGHQKPVSHVSWSPDDRQLLTCGVEE---A 164

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---- 383
           +     +  +  RI +          WSP G  + F   +    +I +   DG +     
Sbjct: 165 VRCWDVSSGECLRIYEKAGVGLVSCGWSPDGKWV-FAGITDR--SICMWDLDGKELECWK 221

Query: 384 -RLLVEDSNLQAPTWSPSGRSLI 405
            +  ++ S+L+  +   +G  ++
Sbjct: 222 GQRTLQISDLEIAS---NGNQIM 241



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 83/220 (37%), Gaps = 24/220 (10%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +V + T +D     V+ ++     + K ++   +  +    +S + ++ L     +EA+
Sbjct: 111 NRVIWTTSNDG----VFSVNVNGGVSLKHKLSGHQKPVSHVSWSPDDRQLLTCG-VEEAV 165

Query: 283 DIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQK 339
             +  D+ S    R+     +  +S  +SPD    VF   +DR     + +   +G + +
Sbjct: 166 RCW--DVSSGECLRIYEKAGVGLVSCGWSPDGKW-VFAGITDRS----ICMWDLDGKELE 218

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                +     D   +  G+ I          AI +  ++   E+ + ED  + + + S 
Sbjct: 219 CWKGQRTLQISDLEIASNGNQIMSICKDT---AILLFDREAKAEKFIEEDHTITSFSLSR 275

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
             R L+           +++  ++ G  + +     +  +
Sbjct: 276 DCRFLLV-----NLLNQEIHLWNIEGEAKFIAKYKGHKRE 310


>gi|254173470|ref|ZP_04880143.1| acylamino acid-releasing enzyme [Thermococcus sp. AM4]
 gi|214032879|gb|EEB73708.1| acylamino acid-releasing enzyme [Thermococcus sp. AM4]
          Length = 623

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 99/272 (36%), Gaps = 48/272 (17%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T SR   + +PR      KVAY           Y     ++        F      PR S
Sbjct: 10  TFSRFAYVNDPRI--EGSKVAYTLTKVNMKDNRYESTVVVEDLETGSKRFIENASMPRLS 67

Query: 267 SNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ--------- 315
            +G++   +   +E    +++  +L++ + +++ +   I  S  ++ DS +         
Sbjct: 68  PDGRKLAFTRPNEEKKETEVWVAELETLSAKKVLSAKNI-RSLQWNDDSRRLLVVGFKRH 126

Query: 316 ------------IVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                         F+S    +G++  + +  +   ++ I + ++  +   +W   G LI
Sbjct: 127 DDDDFVFDDDVPFWFDSMGFLDGEKTTFWV-LDTEAEEVIEEFEKPRFSSGLWHGDGILI 185

Query: 362 AFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                   K      + I + K DG++E+L    S     +    G++++ S K++    
Sbjct: 186 NVPHREDGKPALFKFYDIYLWK-DGNEEKLFERVSLRAVDS---DGKAILLSGKREKKFM 241

Query: 416 SK---LYSIDLNGRNETLINTPAYASDPQWVG 444
           S+   LY  D  G  + +   P       W  
Sbjct: 242 SEHDWLYIYD--GELKPVYEGPLDV----WGA 267


>gi|114593199|ref|XP_001158397.1| PREDICTED: WD repeat-containing protein 1 isoform 6 [Pan
           troglodytes]
          Length = 571

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 64/227 (28%), Gaps = 59/227 (25%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + +        F   ++ + +++A      E    V+L D+        +G        
Sbjct: 59  HQVVVAKYAPSGFYIAWTEDSKRIAVVGEGREKFGAVFLWDSGSS-----VGEITGHN-- 111

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
                                I SVD++ +   RL      N +A +             
Sbjct: 112 -------------------KVINSVDIKQSRPYRLATGSDDNCAAFF------------- 139

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           EG    +              D         +SP G+  A     G    I +      +
Sbjct: 140 EGPPFKFKFTIG---------DHSRFVNCVRFSPDGNRFATASADG---QIYIYDGKTGE 187

Query: 383 ERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +          D  + A +WSP    L+      GD  SK++ + +N
Sbjct: 188 KVCALGGSKAHDGGIYAISWSPDSTHLL---SASGDKTSKIWDVSVN 231


>gi|227538123|ref|ZP_03968172.1| exported dipeptidyl peptidase IV [Sphingobacterium spiritivorum
           ATCC 33300]
 gi|227242028|gb|EEI92043.1| exported dipeptidyl peptidase IV [Sphingobacterium spiritivorum
           ATCC 33300]
          Length = 725

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/204 (13%), Positives = 75/204 (36%), Gaps = 17/204 (8%)

Query: 219 FSP---NQQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +SP     +++ Y     +     L +Y   T    + +        + A  +  N +  
Sbjct: 228 WSPRIAEAKEIRYPMAGMKSEEVTLVIYNTTTGTSTSLQTGEPKEQYLTAVTWDPNNEYI 287

Query: 273 LI-SVQKDEA-MDIYSVDLQSNA------TERLTNTLFINISASYSPDSSQ-IVFESDRE 323
            +  + + +  +     + +S A       E  T  +      ++ PD+ +  +++SD+E
Sbjct: 288 YVGVLNRGQNHLKFNKYNAKSGAFVKTLFEETTTTWVEPQTPLTFVPDNPKLFLYQSDKE 347

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGS 381
           G  QLY+  + G   +++            +S + D + +T    +G    +  ++    
Sbjct: 348 GYNQLYLYDTEGKLVRKLGYKDIIVKDLLSFSAKADKVTYTGVTNNGLDRQLFEVELKSG 407

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
           +   L  +S     + + +   ++
Sbjct: 408 KTTQLTSESGTHTASANSNSTYVL 431


>gi|167534993|ref|XP_001749171.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772324|gb|EDQ85977.1| predicted protein [Monosiga brevicollis MX1]
          Length = 515

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 74/208 (35%), Gaps = 16/208 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP  + +A   +D     R++   T+      R+      +   R+S +GK+ L +   
Sbjct: 229 WSPAGELLASGCFD--GSARIW---TKQGELQCRLRAHTGPLFCLRWSPSGKQLL-TCSV 282

Query: 279 DEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D++  ++  D+ S  T R+ T      +  ++    S+ VF S       +    +    
Sbjct: 283 DQSAIVW--DVASGTTRRVFTFHHGPCVGVAW---KSEEVFASCSIDGSVIVCHVTENEP 337

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             R +   +       W   G L+A          I  ++    Q  L  +D       W
Sbjct: 338 LHRFTGHTD-EVNVVSWHAAGQLLASCS-DDNTARIWSLEAAACQHVLRHDDKLYTL-AW 394

Query: 398 S-PSGRSLIFSRKKDGDTGSKLYSIDLN 424
           + P G  L+ ++     +   L S   +
Sbjct: 395 ARPFGSRLVVAQISKPISFPLLCSASFD 422


>gi|220922292|ref|YP_002497594.1| adenylate/guanylate cyclase [Methylobacterium nodulans ORS 2060]
 gi|219946899|gb|ACL57291.1| adenylate/guanylate cyclase [Methylobacterium nodulans ORS 2060]
          Length = 667

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 48/134 (35%), Gaps = 21/134 (15%)

Query: 45  YSPVSIAFTKFVSIDE------LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP 98
            + +SI    F S D       L   ++  ++ DL R      I         T      
Sbjct: 266 AARLSIVVLPFASRDGGPEYERLAESIAAEITSDLSR------IEGSFVIASSTALAYKD 319

Query: 99  RFQDWNSLG----AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI 154
           +  D   LG     + L+ G +   G  R+R+  RL D     +I  ++F S  ++    
Sbjct: 320 KLADVRDLGRELRVRYLLNGSLRHTGT-RVRINARLIDTVTGAEIWAERFKSDASAISD- 377

Query: 155 AHTISDDIYQSITG 168
              I DD+   IT 
Sbjct: 378 ---IEDDVVAQITR 388


>gi|156405892|ref|XP_001640965.1| predicted protein [Nematostella vectensis]
 gi|156228102|gb|EDO48902.1| predicted protein [Nematostella vectensis]
          Length = 1229

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 75/229 (32%), Gaps = 48/229 (20%)

Query: 220 SPNQQKVAY-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           SP++  + +       Y        ++ D   ++  K + +    I   R++ +    + 
Sbjct: 377 SPDKTMLFFAKNKTMEYRYSSFADYFVYDIAKNKYEKIVTSGGVQIQHVRWAPDRNALVY 436

Query: 275 SVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQI-VFESDREGKEQLYVMQ 332
            V+ D    D   + L      RLTN            D  ++ +F    +   Q  V+ 
Sbjct: 437 VVENDMHYIDDVRLPLP--EAHRLTN------------DGDRLRIFNGVPDWVYQEEVLN 482

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           ++               +   +SP    +A+ +F+  +    V    GS + +       
Sbjct: 483 TD---------------YAMYFSPDSKYLAYMQFNDTRVKDYVYPWYGSAKNIY------ 521

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                 PS R + + +    +   ++  IDL    + L+   A    P 
Sbjct: 522 ------PSQRKIAYPKPGTPNPTVRVKVIDLTRITKGLLPPAAELPVPA 564


>gi|115495429|ref|NP_001069371.1| coronin-7 [Bos taurus]
 gi|122143427|sp|Q0V8F1|CORO7_BOVIN RecName: Full=Coronin-7; Short=Crn7
 gi|110332003|gb|ABG67107.1| coronin 7 [Bos taurus]
          Length = 915

 Score = 49.6 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 70/205 (34%), Gaps = 22/205 (10%)

Query: 184 VVSGIIKNSLCVMDRDGAN-----IRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDIL 237
           V     +  L  +  DG          +     + ++  RF P     +A ++YD    L
Sbjct: 553 VAGEDARIRLWRVPPDGLQEVLTMPEAVLTGHTEKIYSLRFHPLAADVLASSSYD----L 608

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V + D ++     R+   R  I    +S +G++   +V KD  + IY       + E L
Sbjct: 609 TVRIWDLKVGAEQLRLQGHRDQIFGLAWSPDGQQLA-TVCKDGRLRIYEPR---GSPEPL 664

Query: 298 TNTLFIN----ISASYSPDSSQIV---FESDREGKEQLYVMQS-NGSDQKRISQDKEASY 349
                          +  D   ++   F+S  E +  LY  ++  G     +  D   S 
Sbjct: 665 QEGPGPEGARGARVVWVCDGHYLLVSGFDSRSERQLLLYSAKALAGGPSAVLGLDVAPST 724

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIG 374
             P + P   L+  T     +  + 
Sbjct: 725 LLPSYDPDTGLVLLTGKGDTRVFLY 749


>gi|320040009|gb|EFW21943.1| WD-repeat protein 5 [Coccidioides posadasii str. Silveira]
          Length = 467

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 51/151 (33%), Gaps = 9/151 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +SP+   +A  + D      + L +     + P       + I +  FS  G   + S  
Sbjct: 200 WSPDGTFIASGSDDK----SIRLWNVLTGKQHPTPFLGHHNYIYSIAFSPKGNMLV-SGS 254

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            DEA+ ++ V   +     L           +  D + I   +  +G  +++   + G  
Sbjct: 255 YDEAVFLWDV-RSARVMRSLPAHSDPVAGIDFIRDGTLIASCAS-DGLIRIWD-SATGQC 311

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            + +  +         +SP G  +      G
Sbjct: 312 LRTLVHEDNPPVMGVKFSPNGKYVLAWTLDG 342



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 56/178 (31%), Gaps = 31/178 (17%)

Query: 252 RIGNFRSMILAPRFSSNGKRAL------------------ISVQKDEAMDIYSVDLQSNA 293
            +   +  + A +FS +G                            +   I   ++ +  
Sbjct: 166 VLKGHQRGVSAVQFSPDGSMIASCCHLGGISTLCWSPDGTFIASGSDDKSIRLWNVLTGK 225

Query: 294 TER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 L +  +I  S ++SP  + +V  S     E +++     +   R          
Sbjct: 226 QHPTPFLGHHNYI-YSIAFSPKGNMLVSGSY---DEAVFLWDVRSARVMRSLPAHSDPVA 281

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
              +   G LIA     G    I +      Q  R LV + N  +    +SP+G+ ++
Sbjct: 282 GIDFIRDGTLIASCASDG---LIRIWDSATGQCLRTLVHEDNPPVMGVKFSPNGKYVL 336



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 11/140 (7%)

Query: 186 SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG    S+ + +   G             ++   FSP    +   +YD+     V+L D 
Sbjct: 209 SGSDDKSIRLWNVLTGKQHPTPFLGHHNYIYSIAFSPKGNMLVSGSYDE----AVFLWDV 264

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFI 303
           R  R  + +      +    F  +G         D  + I+  D  +      L +    
Sbjct: 265 RSARVMRSLPAHSDPVAGIDFIRDGTLIASCAS-DGLIRIW--DSATGQCLRTLVHEDNP 321

Query: 304 NISAS-YSPDSSQI-VFESD 321
            +    +SP+   +  +  D
Sbjct: 322 PVMGVKFSPNGKYVLAWTLD 341


>gi|317141017|ref|XP_001818543.2| WD domain protein [Aspergillus oryzae RIB40]
          Length = 327

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 60/174 (34%), Gaps = 12/174 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            VS      +  +D +G  IRY   ++         S + + +A       +   VY+  
Sbjct: 139 GVSQDGHIRVWDLDANGEQIRY-YETKGSFGTCIDLSADGRFIA----SGHENGSVYIFS 193

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLF 302
           T   R P  +      + A  FS  GK         ++  I   D  S      L     
Sbjct: 194 TETGRMPFSLSGLVKPVRAVAFSPGGKFLA---AAGDSNVIVLYDTSSGEQVANLPGHSA 250

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
             +S S+S     ++  S  +GK +++ + +          + E + ++  W P
Sbjct: 251 WVLSLSWSHTGEYLLSGSF-DGKVKVWSIDTRTCVAT--HSETERAVWNVKWLP 301



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 58/175 (33%), Gaps = 16/175 (9%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG      T S    ++    S + Q +A  + D    +     +    R  +  G+F +
Sbjct: 110 DGNWSENKTVSGSTGVWAIALSGDGQYLAGVSQDGHIRVWDLDANGEQIRYYETKGSFGT 169

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSS 314
            I     S++G+         E   +Y    ++    R+  +L   +      ++SP   
Sbjct: 170 CI---DLSADGRFIA---SGHENGSVYIFSTETG---RMPFSLSGLVKPVRAVAFSPGGK 220

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +    D      + +  ++  +Q        A      WS  G+ +    F G+
Sbjct: 221 FLAAAGD---SNVIVLYDTSSGEQVANLPGHSAWVLSLSWSHTGEYLLSGSFDGK 272


>gi|297803048|ref|XP_002869408.1| hypothetical protein ARALYDRAFT_913505 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315244|gb|EFH45667.1| hypothetical protein ARALYDRAFT_913505 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 321

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 72/226 (31%), Gaps = 25/226 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S  + + + V D D      +  +    ++  +F P    +A A         V L DT 
Sbjct: 77  SSSLDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVA---GGSSASVKLWDTS 133

Query: 246 IDR-------------APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             R              P    + +  +L+  +S NGKR       D  + ++ VD +S 
Sbjct: 134 SWRLISTLSIPRPEAPKPSEKTSSKKFVLSVAWSPNGKRLA-CGSMDGTICVFDVD-RSK 191

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              +L        S  +SP   +I+F    +G   + +  + G           +     
Sbjct: 192 LLHQLEGHNMPARSLVFSPVDPRILFSGSDDG--HVNMHDAEGKTLLGSMSGHTSWVLSV 249

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             SP G  IA          + +           + + N Q   WS
Sbjct: 250 DASPDGGAIATGSSDRT---VRLWDLKMRAAIQTMSNHNDQ--VWS 290



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 89/282 (31%), Gaps = 50/282 (17%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G +  ++ +   D  ++          +      P+   +  A+   +  +RV+ +DT 
Sbjct: 35  TGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSG--IIAASSSLDSFVRVFDVDTN 92

Query: 246 --IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL------ 297
             I            M     F   G    ++     ++ ++     +++   +      
Sbjct: 93  ATIAVLEAPPSEVWGMQ----FEPKGTILAVAGGSSASVKLW----DTSSWRLISTLSIP 144

Query: 298 ----------TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                     T++    +S ++SP+  ++   S  +G   + V   + S      +    
Sbjct: 145 RPEAPKPSEKTSSKKFVLSVAWSPNGKRLACGS-MDGT--ICVFDVDRSKLLHQLEGHNM 201

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW------SPSG 401
                V+SP    I F+        + +   +G      +  S     +W      SP G
Sbjct: 202 PARSLVFSPVDPRILFSGSDDG--HVNMHDAEGK----TLLGSMSGHTSWVLSVDASPDG 255

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            ++        D   +L+ +    +    I T +  +D  W 
Sbjct: 256 GAIA---TGSSDRTVRLWDL----KMRAAIQTMSNHNDQVWS 290


>gi|242010592|ref|XP_002426049.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212510059|gb|EEB13311.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 471

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 47/134 (35%), Gaps = 5/134 (3%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+R + S   D  + ++  + +     RLT    +     +SPD   I   S     + 
Sbjct: 329 DGERLV-SGSDDFTLFLWKPETEKKPLARLTGHQQLINDVKFSPDGRVIASASF---DKS 384

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +  +       + +    + +   WS     +  +  +     +  +K+   +  L  
Sbjct: 385 IKLWDAKNGKFLGVLRGHVQAVYVIAWSADSRYLV-SGSADSTLKVWNIKEKRLEIELPG 443

Query: 388 EDSNLQAPTWSPSG 401
               + A  W+P G
Sbjct: 444 HADEVYAVDWAPDG 457



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 54/143 (37%), Gaps = 12/143 (8%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           + +++   + D      ++L     ++ P  R+   + +I   +FS +G+    S   D+
Sbjct: 329 DGERLVSGSDD----FTLFLWKPETEKKPLARLTGHQQLINDVKFSPDGRVIA-SASFDK 383

Query: 281 AMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++ ++  D ++      L   +      ++S DS  +V  S       L V        +
Sbjct: 384 SIKLW--DAKNGKFLGVLRGHVQAVYVIAWSADSRYLVSGS---ADSTLKVWNIKEKRLE 438

Query: 340 RISQDKEASYFDPVWSPQGDLIA 362
                     +   W+P G ++A
Sbjct: 439 IELPGHADEVYAVDWAPDGCVVA 461



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 61/155 (39%), Gaps = 19/155 (12%)

Query: 182 ESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    +L +   +             Q++ + +FSP+ + +A A++D      + 
Sbjct: 331 ERLVSGSDDFTLFLWKPETEKKPLARLTGHQQLINDVKFSPDGRVIASASFDK----SIK 386

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--- 297
           L D +  +    +      +    +S++ +  + S   D  + ++++       +RL   
Sbjct: 387 LWDAKNGKFLGVLRGHVQAVYVIAWSADSRYLV-SGSADSTLKVWNI-----KEKRLEIE 440

Query: 298 TNTLFINISAS-YSPDSSQIVFESDREGKEQLYVM 331
                  + A  ++PD   +       GK++L  +
Sbjct: 441 LPGHADEVYAVDWAPDGCVVA----SGGKDKLLRL 471


>gi|148241444|ref|YP_001226601.1| hypothetical protein SynRCC307_0345 [Synechococcus sp. RCC307]
 gi|147849754|emb|CAK27248.1| Conserved hypothetical protein [Synechococcus sp. RCC307]
          Length = 162

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 49/125 (39%), Gaps = 3/125 (2%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQG 358
            L      + S +   +V   DR G+  L +++ +   +  +   ++   +  P  S  G
Sbjct: 24  GLGDQEDPALSGNGRLLVSVVDRGGRRSLRLVERSTGRELPLPGLRQGQPHRSPSLSWTG 83

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             +AF +  G +    ++ +   + + L    D   +  + +P G+ L     + G    
Sbjct: 84  RYLAFIRQRGTRPEAVLLDRLSGRLQPLALPNDRLPERLSLAPDGQQLAVQVLRRGQLDL 143

Query: 417 KLYSI 421
           +L+ +
Sbjct: 144 ELFRL 148



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/125 (12%), Positives = 38/125 (30%), Gaps = 2/125 (1%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQ 315
                P  S NG+  +  V +     +  V+  +     L        + S S S     
Sbjct: 26  GDQEDPALSGNGRLLVSVVDRGGRRSLRLVERSTGRELPLPGLRQGQPHRSPSLSWTGRY 85

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + F   R  + +  ++       + ++   +        +P G  +A       +  + +
Sbjct: 86  LAFIRQRGTRPEAVLLDRLSGRLQPLALPNDRLPERLSLAPDGQQLAVQVLRRGQLDLEL 145

Query: 376 MKKDG 380
            +  G
Sbjct: 146 FRLPG 150



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 5/126 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +P  S N + +              +  +     P           +P  S  G+     
Sbjct: 30  DPALSGNGRLLVSVVDRGGRRSLRLVERSTGRELPLPGLRQGQPHRSPSLSWTGRYLAFI 89

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQ 332
            Q+    +   +D  S   + L   L  +      S +PD  Q+  +  R G+  L + +
Sbjct: 90  RQRGTRPEAVLLDRLSGRLQPL--ALPNDRLPERLSLAPDGQQLAVQVLRRGQLDLELFR 147

Query: 333 SNGSDQ 338
             G + 
Sbjct: 148 LPGLEP 153


>gi|313202667|ref|YP_004041324.1| dipeptidyL-peptidase iv [Paludibacter propionicigenes WB4]
 gi|312441983|gb|ADQ78339.1| dipeptidyl-peptidase IV [Paludibacter propionicigenes WB4]
          Length = 725

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 61/191 (31%), Gaps = 35/191 (18%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR-----IDRAPKRIGNFRSMILA 262
             R + +  PR   + +   ++       +  Y   T      I    +   +    I  
Sbjct: 29  RFRAKSVNTPRSMSDGEH--FSLMPTSKAVVKYNFKTGAVVDTIFSISRLKKSPIKSISG 86

Query: 263 PRFSSNGKRAL------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             FS N  + L         ++    D Y  D++ N    L+      +   +SPDS  I
Sbjct: 87  YEFSPNEAKLLVYTNVKYRYRRTFTADYYVYDIKRNELTPLSENGSQEV-PLFSPDSRYI 145

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDK-----------------EASYFDPVWSPQGD 359
            F  +      LY+ + + + +  I++D                          WSP   
Sbjct: 146 AFARE----NNLYMKKLDFNTEIAITKDGKFGSIINGTPDWVYEEEFEDTRYFEWSPDSK 201

Query: 360 LIAFTKFSGEK 370
           L+AF KF   K
Sbjct: 202 LLAFVKFDETK 212



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 39/116 (33%), Gaps = 17/116 (14%)

Query: 340 RISQDKEASYFDPVWSPQ-GDLIAFTK-----FSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           R+ +    S     +SP    L+ +T               V     ++   L E+ + +
Sbjct: 75  RLKKSPIKSISGYEFSPNEAKLLVYTNVKYRYRRTFTADYYVYDIKRNELTPLSENGSQE 134

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD-----PQWVG 444
            P +SP  R + F+R+      + LY   L+   E  I             P WV 
Sbjct: 135 VPLFSPDSRYIAFARE------NNLYMKKLDFNTEIAITKDGKFGSIINGTPDWVY 184



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 55/155 (35%), Gaps = 35/155 (22%)

Query: 309 YSPDSSQIV------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +SP+ ++++      +   R      YV     ++   +S+    S   P++SP    IA
Sbjct: 89  FSPNEAKLLVYTNVKYRYRRTFTADYYVYDIKRNELTPLSE--NGSQEVPLFSPDSRYIA 146

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-----PTW--------------SPSGRS 403
           F + +     + + K D + E  + +D    +     P W              SP  + 
Sbjct: 147 FAREN----NLYMKKLDFNTEIAITKDGKFGSIINGTPDWVYEEEFEDTRYFEWSPDSKL 202

Query: 404 LIFSR---KKDGDTGSKLYSIDLNGRNETLINTPA 435
           L F +    K  +    LY ID       L   P+
Sbjct: 203 LAFVKFDETKVPEYSFPLY-IDNTKEKGELTTYPS 236


>gi|302819061|ref|XP_002991202.1| hypothetical protein SELMODRAFT_429517 [Selaginella moellendorffii]
 gi|300141030|gb|EFJ07746.1| hypothetical protein SELMODRAFT_429517 [Selaginella moellendorffii]
          Length = 127

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 35/82 (42%), Gaps = 1/82 (1%)

Query: 193 LCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           + + D   G + +       Q++    FSP+ + +A A++D    L   + + R  +  +
Sbjct: 1   MYLWDPATGKHPKTRMSGHQQLVNHVYFSPDGRWIASASFDKSVKLWNGVWNMRNHKLLE 60

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G++  
Sbjct: 61  DLPGHADEVFAVDWSPDGQKVA 82



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 33/82 (40%), Gaps = 5/82 (6%)

Query: 240 YLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           YL D    + PK R+   + ++    FS +G+    S   D+++ +++        + L 
Sbjct: 2   YLWDPATGKHPKTRMSGHQQLVNHVYFSPDGRWIA-SASFDKSVKLWNGVWNMRNHKLLE 60

Query: 299 NTLFINISAS---YSPDSSQIV 317
           +            +SPD  ++ 
Sbjct: 61  DLPGHADEVFAVDWSPDGQKVA 82


>gi|298372474|ref|ZP_06982464.1| OmpA family outer membrane protein [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298275378|gb|EFI16929.1| OmpA family outer membrane protein [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 633

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 54/154 (35%), Gaps = 13/154 (8%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--QKDEAMDI- 284
           +++ +D  + R              + N      +   S++G+        + D      
Sbjct: 196 FSSNEDLYVSRKTGNQWGAFTPIAELNNPSYNEGSQTISADGRYMFFVACNRPDGLGSCD 255

Query: 285 --YSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDRE---GKEQLYVMQSN 334
             Y+++     ++ +      N+ +   + ++SP   +I F S+R+   G   L+  +  
Sbjct: 256 IYYTINTNGRWSKPINAGAPLNSAYWESNPAFSPAGDEIFFTSNRQPSFGGRDLWHCKVE 315

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             +  ++   +  +    + SP+ D   +     
Sbjct: 316 ILENGQLRFSEPENMGRTINSPRDDYAPYIHLDN 349



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 56/173 (32%), Gaps = 30/173 (17%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----DREGK-EQ 327
           L   +K          +       L N  +   S + S D   + F +    D  G  + 
Sbjct: 202 LYVSRKTGNQWGAFTPIA-----ELNNPSYNEGSQTISADGRYMFFVACNRPDGLGSCDI 256

Query: 328 LYVMQSNGSDQKRISQDKEASY----FDPVWSPQGDLIAFTKFSGEKF---AIGVMK--- 377
            Y + +NG   K I+     +      +P +SP GD I FT      F    +   K   
Sbjct: 257 YYTINTNGRWSKPINAGAPLNSAYWESNPAFSPAGDEIFFTSNRQPSFGGRDLWHCKVEI 316

Query: 378 KDGSQE---------RLLVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYS 420
            +  Q          R +    +  AP      ++L F     +G  GS ++ 
Sbjct: 317 LENGQLRFSEPENMGRTINSPRDDYAPYIHLDNQTLYFLSNGHNGFGGSDIFV 369


>gi|255037862|ref|YP_003088483.1| OmpA/MotB domain-containing protein [Dyadobacter fermentans DSM
           18053]
 gi|254950618|gb|ACT95318.1| OmpA/MotB domain protein [Dyadobacter fermentans DSM 18053]
          Length = 525

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 74/215 (34%), Gaps = 40/215 (18%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKD--------EAMDIYSVDLQS---NATERLT---NT 300
           N     ++P  S +GK    S             + DI+  +L+S       RL    N 
Sbjct: 29  NTEYNEISPIISPDGKTIYFSRVSHPQNTHGPKGSQDIWFSELKSDKWTPARRLPAPLNK 88

Query: 301 LFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKR-----------ISQDKEAS 348
              N   S +PD + ++   S + G  +     ++    +             ++  +  
Sbjct: 89  EDYNSLYSITPDGNTLLIKGSYKNGTYETRGFSTSKKTARGWSAPNKLDIPGYTKLSKGQ 148

Query: 349 YFDPVWSPQGDLIAFT---KFSGEKFAIGVM--KKDGS-------QERLLVEDSNLQAPT 396
           +     S  G ++  +   K + +   + V   +KDGS          +  ED     P 
Sbjct: 149 FDCGYLSNDGKVLVMSFSEKKNSKVDDLYVSFKQKDGSWSKPMNLGAEINTEDFTETTPF 208

Query: 397 WSPSGRSLIFSRKKDGDTGSK--LYSIDLNGRNET 429
            +P G +L FS  + G  GS    YS  ++   + 
Sbjct: 209 LAPDGVTLYFSSDRKGGQGSNDIYYSKRIDKSWKR 243


>gi|126642097|ref|YP_001085081.1| hypothetical protein A1S_2052 [Acinetobacter baumannii ATCC 17978]
          Length = 344

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 80/275 (29%), Gaps = 45/275 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF------ 256
              S          S + + +    Y+ +D        L         + + N       
Sbjct: 71  TVNSHGGHPTHASISLDGKFLFVSNYSAFDKGRGGVAVLPILPNGHLGEMVQNIVFAEGS 130

Query: 257 --------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-- 306
                        +  FS +GK    S   ++ +  +  +      + L      ++S  
Sbjct: 131 GHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYNPS--KPQPLEADKSRDVSFK 188

Query: 307 -------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------QDKEASYF 350
                    +SP+  Q    ++   + ++          K+++           +  S  
Sbjct: 189 HGSGPRHMVFSPNGKQAYITAEM--RSEIVTFNVQDGHLKKVAELKLVHEDKTPEFKSAS 246

Query: 351 DPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS--GRSLIF 406
             + SP G   IA  + +  K  +  ++++G   +  V  +N   P  +S    G+ L  
Sbjct: 247 GIILSPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGIEPRAFSFDESGKYLYV 306

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +          L+  D    +   +   A  S P 
Sbjct: 307 TNVYSN--NISLFRFDTKNGSLKPLGDAAKISTPT 339


>gi|116198367|ref|XP_001224995.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88178618|gb|EAQ86086.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 775

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/262 (12%), Positives = 74/262 (28%), Gaps = 57/262 (21%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D +N   L  +     +   +S + + +   + ++E  L+V           +++    
Sbjct: 391 MDFSNDHQLVAAGTMDSYIRVWSLDGKPLP-TSVENEKDLKVNN---------RKLIGHS 440

Query: 258 SMILAPRFS------------------SN-GKRALISVQKDEAMDIYSVDL--------- 289
             +    FS                   +   + L+S   D  + ++S+D+         
Sbjct: 441 GPVYGVAFSDSIANLSRNIYGEGEDKKPDTSTKLLLSCSADGQIRLWSLDVWACLCIYKS 500

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                 R+           +SP              + + V   + +  +R+    + S 
Sbjct: 501 HYGPVFRV----------LWSPHGHYFA---TAGWDKTVRVFSQDHASAQRLMVGHDTSI 547

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPSGRSLIFS 407
               W P G  I F+       +I +          +             + +G+ L   
Sbjct: 548 SALAWHPNGTYI-FSASDEMDKSIRMWSITTGNCVRVFTGHAHYISALECAHNGKILA-- 604

Query: 408 RKKDGDTGSKLYSIDLNGRNET 429
              D      L+ ID   R + 
Sbjct: 605 -SADAGGNIILWDIDKGTRIKR 625



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 66/187 (35%), Gaps = 6/187 (3%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     ++ V  +D A+ + L    D  +    + PN   +  A+ + +  +R  +    
Sbjct: 519 TAGWDKTVRVFSQDHASAQRLMVGHDTSISALAWHPNGTYIFSASDEMDKSIR--MWSIT 576

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +        I A   + NGK  L S      + ++ +D  +       +      
Sbjct: 577 TGNCVRVFTGHAHYISALECAHNGK-ILASADAGGNIILWDIDKGTRIKRCRGHGKGGIP 635

Query: 306 SASYSPDSSQIVFESDREGKEQLY--VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           S S+S +S+ +V     +G  +++   + ++ +    ++            +  GD IA 
Sbjct: 636 SLSFSVESNVLV-SGGLDGTVRVWDVELPADPNKANPLTAGVIQPVPQVDGAVAGDSIAV 694

Query: 364 TKFSGEK 370
              S  +
Sbjct: 695 GGPSDSR 701


>gi|168699818|ref|ZP_02732095.1| serine/threonine protein kinase [Gemmata obscuriglobus UQM 2246]
          Length = 753

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/203 (13%), Positives = 65/203 (32%), Gaps = 10/203 (4%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +       +      P+  +     +   +D   + L  T   +   +I           
Sbjct: 444 VFEGHHGTISGLSVHPDGTRFVSVGSTLTKDDGTIRLWSTASGKRTHQIRAGGVRAECVA 503

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +++G   + +   D  + IY  D ++    RL          +  P   +I    D  G
Sbjct: 504 LTADGHTIV-AGFIDGTVRIYEWDSET-ELVRLRADRVAVTCVAPDPTGRRIA-IGDARG 560

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + +++   + G     I+  +        ++P G  +A     G   A+         ER
Sbjct: 561 RVRMWD-PATGRVGLTITAHEPRPCRGIAFAPDGKTVATVGLDG---ALRTWDTSTGYER 616

Query: 385 --LLVEDSNLQAPTWSPSGRSLI 405
             L++        +++  G+ ++
Sbjct: 617 LALILGTDLAWGVSFTNGGKQIV 639


>gi|154286822|ref|XP_001544206.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150407847|gb|EDN03388.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 687

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 64/188 (34%), Gaps = 17/188 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++  S   + +L ++  +G     +   ++  + +  +SPN ++             +
Sbjct: 247 VDKTGKSYYGETTLYLLSANGGFDSRIDLDKEGPIHDVTWSPNSKEFGVVYGYMPAKTTI 306

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  LAPR    FS NG+  +++   + A  +   DL  + T+
Sbjct: 307 FNN---------RAVATHSFALAPRNTIIFSPNGRFVIVAGFGNLAGQLDIYDLDRDYTK 357

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             T          +SPD   I     S R   +    +   G     +  +     +   
Sbjct: 358 VATIEASNASVCEWSPDGKFILTATTSPRLRVDNGVRIWHVGGGL--MYNEDLTELYQVC 415

Query: 354 WSPQGDLI 361
           W PQ   +
Sbjct: 416 WRPQSTTV 423



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 23/222 (10%)

Query: 218 RFSP-NQQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALI 274
             SP +   +A +          V + +      P    NF +   +  ++++ G   ++
Sbjct: 182 ALSPGDSNSIAVFIPERKGLPASVRIFNVPQFDTPVSQKNFFKGDKVQLKWNNTGTTLIV 241

Query: 275 SVQKD---------EAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQI-VFESDRE 323
             Q D             +Y +        R+  +        ++SP+S +  V      
Sbjct: 242 LAQTDVDKTGKSYYGETTLYLLSANGGFDSRIDLDKEGPIHDVTWSPNSKEFGVVYGYMP 301

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            K  ++  ++  +    +     A     ++SP G  +    F      + +   D    
Sbjct: 302 AKTTIFNNRAVATHSFAL-----APRNTIIFSPNGRFVIVAGFGNLAGQLDIYDLDRDYT 356

Query: 384 RLLV-EDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
           ++   E SN     WSP G+ ++ +        D G +++ +
Sbjct: 357 KVATIEASNASVCEWSPDGKFILTATTSPRLRVDNGVRIWHV 398



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 17/128 (13%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-- 381
           G+  LY++ +NG    RI  DKE    D  WSP                 G M    +  
Sbjct: 256 GETTLYLLSANGGFDSRIDLDKEGPIHDVTWSPNSKEFGVV--------YGYMPAKTTIF 307

Query: 382 QERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAY 436
             R +   S   AP     +SP+GR +I +   +      +Y +D +  +  T+  + A 
Sbjct: 308 NNRAVATHSFALAPRNTIIFSPNGRFVIVAGFGNLAGQLDIYDLDRDYTKVATIEASNAS 367

Query: 437 ASDPQWVG 444
             +  W  
Sbjct: 368 VCE--WSP 373


>gi|296212536|ref|XP_002752872.1| PREDICTED: WD repeat-containing protein 51B [Callithrix jacchus]
          Length = 478

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 92/259 (35%), Gaps = 22/259 (8%)

Query: 160 DDIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           D + +          + + F S    + +      L + +       Y       ++   
Sbjct: 7   DPVLERYFKGHKAALASLDFSSNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSV 66

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FSP+   +A A+ D    +R+++ D R   +  +       + +  FS++G+    +  
Sbjct: 67  QFSPHGNLLASASRD--RTVRLWIPDKRGKFSEFKAHTAP--VRSVDFSADGQFLA-TAS 121

Query: 278 KDEAMDIYSVDLQSNATER-----LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           +D+++ ++S+        +     L         A +SPD   IV  S+    + + +  
Sbjct: 122 EDKSIKVWSM------YRQCFLYSLYRHTHWVRCAKFSPDGRLIVSCSE---DKTIKIWD 172

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +          D         ++P G  IA +  S +   +  ++ +   +   V    +
Sbjct: 173 TTNKQCVNNFSDFIGFANFVDFNPSGTCIA-SAGSDQTVKVWDIRVNKLLQHYQVHSGGV 231

Query: 393 QAPTWSPSGRSLIFSRKKD 411
              ++ PSG  LI +    
Sbjct: 232 NCISFHPSGNYLITASSDG 250


>gi|149248578|ref|XP_001528676.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146448630|gb|EDK43018.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 934

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 78/222 (35%), Gaps = 31/222 (13%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYD------------DEDILRVYLMDTRIDRAPKRIG 254
               + ++   +FSP+ + +A  + D                  V   D       KR+ 
Sbjct: 1   MSRHNGVVTSLKFSPDGRWLASGSDDKIVLIWEKDDTQRPKAFGVEQEDLEHWTVRKRLV 60

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              + I    +S +G   L++V  D ++ I++  +     +R      +     + P + 
Sbjct: 61  AHDNDIQDICWSLDGN-LLVTVGLDRSIIIWNA-ITFERIKRYDIHQSMVKGIVFDPANK 118

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-------------VWSPQGDLI 361
                SD +   +++      ++  +     E    DP              WSP G  I
Sbjct: 119 FFATASD-DRTVRIFRYHKKLNEYNKYEFQMEHVVVDPFKKSPLTSYFRRMSWSPDGQHI 177

Query: 362 AFTKFSGEKF-AIGVMKKD--GSQERLLVEDSNLQAPTWSPS 400
           A    +     ++ ++ +   GS   L+  ++ ++  ++SPS
Sbjct: 178 AVPNATNGPVPSVAIINRGNWGSDVSLIGHEAPVEVCSFSPS 219



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 38/120 (31%), Gaps = 18/120 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ Q +A     +  +  V +++     +   +    + +    FS +  +AL S+ 
Sbjct: 169 SWSPDGQHIAVPNATNGPVPSVAIINRGNWGSDVSLIGHEAPVEVCSFSPSLFQALDSLD 228

Query: 278 ---KDEAMDIYSVDLQSNATERLTNTLFINISA---------------SYSPDSSQIVFE 319
              K E +   ++         L      N                   +SPD   + F 
Sbjct: 229 DEKKTEELKFQTILATGGQDRTLAIWSTSNSKPIVVCLDIVYNSITDICWSPDGETLYFS 288


>gi|119094144|gb|ABL60974.1| WD domain/cytochrome C family protein [uncultured marine bacterium
           HF10_19P19]
          Length = 435

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 89/247 (36%), Gaps = 30/247 (12%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILR--VYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             D  +   +F+P+   +     D++ +L     ++    +  P  +      I+   FS
Sbjct: 56  GHDAAVNVAQFTPDGDWLVTGGDDNQILLWSVADILSLGDETTPFVLRGHYGKIVDFAFS 115

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLT------NTLFINISASYSPDSSQIVFES 320
           S+G+  + S   D  + ++ + L  N  E++       +    ++   +S D   + F +
Sbjct: 116 SDGRYLV-SASWDGIVGLWDMALARNRLEQIPISFRGHDGPVNDVQ--FSADGKHL-FSA 171

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G  + + + ++G   + I ++      + +   +   I     +     +  +    
Sbjct: 172 GNDGHIRYWRV-ADGEYLRSIVRNGWG--VNVMLVDEERNILAYGSTDGAMVLAALNTGA 228

Query: 381 SQERLLVEDSNLQAPTWS----PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
              R+       + P  S     +   + F     G+   +L  IDLN    TL+     
Sbjct: 229 EYLRM----GEDRVPVLSVGLNSTANQIAF-----GNAKGQLKIIDLN--TTTLLRDFRA 277

Query: 437 ASDPQWV 443
           A+ P W 
Sbjct: 278 ANGPIWS 284



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 91/239 (38%), Gaps = 26/239 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--- 261
           ++       + +  FS + + +  A++D   I+ ++ M    +R  +   +FR       
Sbjct: 100 FVLRGHYGKIVDFAFSSDGRYLVSASWD--GIVGLWDMALARNRLEQIPISFRGHDGPVN 157

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFES 320
             +FS++GK    S   D  +  + V         +  N   +N+      + + + + S
Sbjct: 158 DVQFSADGKHL-FSAGNDGHIRYWRV-ADGEYLRSIVRNGWGVNVMLV-DEERNILAYGS 214

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G   L  + + G++  R+ +D+         +   + IAF    G    + ++  + 
Sbjct: 215 T-DGAMVLAALNT-GAEYLRMGEDR-VPVLSVGLNSTANQIAFGNAKG---QLKIIDLNT 268

Query: 381 SQERLLVEDSNLQAPTWS----PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +   LL +      P WS    P+   ++ +   D  T  +++          +++TP 
Sbjct: 269 T--TLLRDFRAANGPIWSVMFMPNNGDMMIASLDDFITKWQIHDF-----PPEILDTPG 320



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 11/153 (7%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           A E+ T         + SPD S +V  S  +    ++ +     +   I    +A+    
Sbjct: 8   ALEQYTAHGGPVKHLTLSPDGSLMV-SSSFDYSAVVWSVPELADEATLI--GHDAAVNVA 64

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKK-----DGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            ++P GD +       +     V        + +   L      +    +S  GR L+ +
Sbjct: 65  QFTPDGDWLVTGGDDNQILLWSVADILSLGDETTPFVLRGHYGKIVDFAFSSDGRYLVSA 124

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                D    L+ + L       I       D 
Sbjct: 125 SW---DGIVGLWDMALARNRLEQIPISFRGHDG 154


>gi|116250909|ref|YP_766747.1| hypothetical protein RL1137 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115255557|emb|CAK06634.1| conserved hypothetical exported protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 486

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 74/202 (36%), Gaps = 22/202 (10%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----------RFSSNGKRALIS 275
            YA     + + V    T       ++G+ +   L+P            FS + K   + 
Sbjct: 44  VYAAEQFSNTVSVTDPATNQLLGVIKLGDPQPGNLSPLYKGQVLVHGMGFSPDKKTIAVV 103

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                +  +  +D  +N  +  T        A Y+PD  + V+ + R G++ + V+ ++ 
Sbjct: 104 SI--GSNSVTFIDTATNTVKHTTYVGRSPHEAFYTPDGKE-VWITVR-GEDYISVIDAST 159

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            ++K   +         ++SP G      + F+ E   + V           V+ ++   
Sbjct: 160 FEEKAQIKVPAGP-GMQIFSPDGKYGYICSSFNPETVVVTVADHQIVGH---VKQASPFC 215

Query: 395 PTW--SPSGRSLIFSRKKDGDT 414
           P    SP G+ + F+ K  G  
Sbjct: 216 PNIAASPDGKQVWFTLKDIGKA 237



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 18/161 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+++ +A  +     +  +    T   +    +G          ++ +GK   I+V+ 
Sbjct: 93  FSPDKKTIAVVSIGSNSVTFIDT-ATNTVKHTTYVGRSPHEAF---YTPDGKEVWITVR- 147

Query: 279 DEAMDIYSVDLQS---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                I  +D  +    A  ++     + I   +SPD       S      +  V+    
Sbjct: 148 -GEDYISVIDASTFEEKAQIKVPAGPGMQI---FSPDGKYGYICSSF--NPETVVVTVA- 200

Query: 336 SDQKRISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAIG 374
            D + +   K+AS F P    SP G  + FT     K  + 
Sbjct: 201 -DHQIVGHVKQASPFCPNIAASPDGKQVWFTLKDIGKAQVF 240



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 18/191 (9%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ ++V + T   ED + V    T  ++A  ++     M +   FS +GK   I    + 
Sbjct: 137 PDGKEV-WITVRGEDYISVIDASTFEEKAQIKVPAGPGMQI---FSPDGKYGYICSSFNP 192

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASY-----SPDSSQIVFESDREGKEQLYVMQSNG 335
              + +V     A  ++   +    S        SPD  Q+ F     GK Q++  Q+  
Sbjct: 193 ETVVVTV-----ADHQIVGHVK-QASPFCPNIAASPDGKQVWFTLKDIGKAQVFNAQAPF 246

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              K I      ++ + V +  G   A+    G    + V + D  ++   +   NL   
Sbjct: 247 DLIKTIDTGPITNHVNLVTNKNGSF-AYVTV-GGLNEVKVFRTDNFEQVATIPVGNLPHG 304

Query: 396 TW-SPSGRSLI 405
            W S  G  + 
Sbjct: 305 IWPSGDGTRVY 315



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 60/149 (40%), Gaps = 17/149 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ +     +  + + + V + D +I    K+   F   I A   S +GK+   +++ 
Sbjct: 177 FSPDGKYGYICSSFNPETVVVTVADHQIVGHVKQASPFCPNIAA---SPDGKQVWFTLKD 233

Query: 279 DEAMDIYSVD-----LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                +++       +++  T  +TN + +  +      +    +     G  ++ V ++
Sbjct: 234 IGKAQVFNAQAPFDLIKTIDTGPITNHVNLVTN-----KNGSFAYV-TVGGLNEVKVFRT 287

Query: 334 NGSDQKRISQDKEASYFDPVW-SPQGDLI 361
           +  + ++++     +    +W S  G  +
Sbjct: 288 D--NFEQVATIPVGNLPHGIWPSGDGTRV 314


>gi|158340182|ref|YP_001521352.1| WD-containing repeat protein [Acaryochloris marina MBIC11017]
 gi|158310423|gb|ABW32038.1| WD repeat protein [Acaryochloris marina MBIC11017]
          Length = 1484

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/282 (12%), Positives = 96/282 (34%), Gaps = 27/282 (9%)

Query: 169  EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
               DF++   F++ +     +   +  +  D    R L   ++ +     F P    +  
Sbjct: 1082 WSVDFSNNGSFLASAGEDKNVL--IWDLKSDNIVSRSLVKHKNWVRSV-SFHPKSTLLVS 1138

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             + D      V + +   +   K +    + + A  FS +      S  +D ++ +++++
Sbjct: 1139 GSEDK----SVQICNMLTNACQKTLQGRTNWVWAISFSYDSTTIA-SATEDTSVKLWNIE 1193

Query: 289  LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                  ++ ++      + S+ P+   +    D    E + +   +   + +I +     
Sbjct: 1194 -TGKIKKKFSDHDGSVRTLSFHPNDKYLASAGD---DEIIRIWNVDSDKEFKILKGHTNW 1249

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIF 406
                 +SP G  +           I + +    +   L E     ++A ++ P  R +  
Sbjct: 1250 IRSLEFSPDGQFLVSGSNDNT---IRLWETKAWECHRLYEYHTDTIRAISFDPGSRIIA- 1305

Query: 407  SRKKDGDTGSKLYSID-------LNGRNETLINTPAYASDPQ 441
                  D     +S D       ++  +   + +  ++SD +
Sbjct: 1306 --SVGEDRRLVFWSTDSDRPCKVVDSAHSKRLTSVVFSSDGK 1345



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/325 (16%), Positives = 116/325 (35%), Gaps = 47/325 (14%)

Query: 120  GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                   +  +WDV+DR ++I  K  +                    T     F+S   +
Sbjct: 926  ASGSYDRKIIIWDVRDRSKVIELKDHTG-------------------TVRSVAFSSSGEY 966

Query: 180  VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI--LFEPRFSPNQQKVAYATYDDEDIL 237
             + +   G       +  R  +N + +T   +Q+  +    FSP++  +A          
Sbjct: 967  FASASDDGK------IFIRQTSNWKVITSIDEQLGSVRAIVFSPSEDVLA----SAGHSS 1016

Query: 238  RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             + L + +  +  K +     ++ A +FS NG          +  DI   +L+S   E  
Sbjct: 1017 YIKLWNIKSGKCIKTLDEHLGVVRALKFSPNGDILA---SGGKDTDIRLWNLKSGKCE-- 1071

Query: 298  TNTLFINISASYSPD----SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             NTL  +    +S D     S +   +  +    ++ ++S+    + + + K        
Sbjct: 1072 -NTLKGHSRPIWSVDFSNNGSFLA-SAGEDKNVLIWDLKSDNIVSRSLVKHKNW-VRSVS 1128

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            + P+  L+  +    +   I  M  +  Q+ L    + + A ++S    ++  + +   D
Sbjct: 1129 FHPKSTLLV-SGSEDKSVQICNMLTNACQKTLQGRTNWVWAISFSYDSTTIASATE---D 1184

Query: 414  TGSKLYSIDLNGRNETLINTPAYAS 438
            T  KL++I+     +   +      
Sbjct: 1185 TSVKLWNIETGKIKKKFSDHDGSVR 1209


>gi|20091938|ref|NP_618013.1| surface antigen gene [Methanosarcina acetivorans C2A]
 gi|19917139|gb|AAM06493.1| surface antigen gene [Methanosarcina acetivorans C2A]
          Length = 487

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 87/279 (31%), Gaps = 24/279 (8%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
               +   +V+          ++ V+D    N+    P           +P   K+    
Sbjct: 54  IAGAAPFAYVTNIGDYDQRGPNVAVIDTATNNVTARVPLGGGWPVGVAVNPAGTKI--YV 111

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D      VY++DT  ++   ++    S      F+  G R  ++ Q D   DI+ ++  
Sbjct: 112 VDSPSDSTVYVIDTATNKVSAKVNLGSSYPARITFNPAGTRVYVTKQHD-YTDIFVINPA 170

Query: 291 SNATERLTNTLFINISAS-----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           +N          I +  S     ++PD  +I   +       +YV+ +  +         
Sbjct: 171 TNTLM-----APIIVGPSTYGIAFTPDGKKIYAANCN--NNTIYVIDAATNKVTANISVG 223

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSL 404
           ++       +P G  +    +      + V+          V   N       + +G  +
Sbjct: 224 DSPC-GIAVTPDGKKVYVLNYDSNT--VSVINTATDNVIATVPVGNSPNLVAVTSNGNKV 280

Query: 405 IFSRKK-----DGDTGSKLYSIDLNGRNETLINTPAYAS 438
             +        D  T + + +I +   +  ++  P    
Sbjct: 281 YVANNNTVSVIDTATNNVIATIPVGTSSRKIVINPDGNR 319


>gi|21232905|ref|NP_638822.1| surface antigen gene [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66767022|ref|YP_241784.1| surface antigen gene [Xanthomonas campestris pv. campestris str.
           8004]
 gi|21114739|gb|AAM42746.1| surface antigen protein [Xanthomonas campestris pv. campestris str.
           ATCC 33913]
 gi|66572354|gb|AAY47764.1| surface antigen gene [Xanthomonas campestris pv. campestris str.
           8004]
          Length = 348

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 49/130 (37%), Gaps = 10/130 (7%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD +Q       EG+ Q+ ++       +++   +  +     ++P G  +  +     
Sbjct: 136 SPDGTQFAICV--EGQNQVMLIDVGQFKVQQVIATRGQAPEHCAYTPDGKWVLTSNEGSN 193

Query: 370 KFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                ++       R ++    + +   ++P G S+  ++    +T + +  IDL  R  
Sbjct: 194 DMD--MIDLATHSSRGVVATSGHPRGMAFAPDGHSVYIAQ----ETANVVDVIDLQTRT- 246

Query: 429 TLINTPAYAS 438
              + PA   
Sbjct: 247 RRASIPAGVR 256



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 92/269 (34%), Gaps = 24/269 (8%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           +  T SD + ++++ + G    R+  V         +  L ++D +   +  L  ++D++
Sbjct: 67  VIDTASDTVVRTLSAQ-GALGKRLQQVLP-----GPQGQLYLIDAEHHRLIELDTTQDRV 120

Query: 214 LFE---------PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           L              SP+  + A           V L+D    +  + I           
Sbjct: 121 LRSVEIGENAEGIALSPDGTQFAICVEGQNQ---VMLIDVGQFKVQQVIATRGQAPEHCA 177

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           ++ +GK  L     + + D+  +DL ++++  +  T       +++PD    V+ +    
Sbjct: 178 YTPDGKWVL--TSNEGSNDMDMIDLATHSSRGVVATSGHPRGMAFAPDGHS-VYIAQET- 233

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + V+    +  +R S            S  G  + +    G      +  + G+   
Sbjct: 234 ANVVDVIDLQ-TRTRRASIPAGVRTAGVTLSADGTRL-YASNGGAGSVSVLDTRTGAGIA 291

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            +        P  +P+G  L  +  +   
Sbjct: 292 EIPVGLRPWNPALTPAGDKLYVANGRSNS 320



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 75/193 (38%), Gaps = 13/193 (6%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +N + ++D     ++ +  +R Q      ++P+ + V  +     D+  + L       
Sbjct: 148 GQNQVMLIDVGQFKVQQVIATRGQAPEHCAYTPDGKWVLTSNEGSNDMDMIDLATHSSRG 207

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
                G+ R M     F+ +G    I+  ++ A  +  +DLQ+  T R +    +  +  
Sbjct: 208 VVATSGHPRGM----AFAPDGHSVYIA--QETANVVDVIDLQTR-TRRASIPAGVRTAGV 260

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + S D +++ + S+  G   + V+ +               + +P  +P GD +     +
Sbjct: 261 TLSADGTRL-YASN-GGAGSVSVLDTRTGAGIAEIPVGLRPW-NPALTPAGDKLYVA--N 315

Query: 368 GEKFAIGVMKKDG 380
           G   ++ V+    
Sbjct: 316 GRSNSVSVIDTAT 328


>gi|327353284|gb|EGE82141.1| periodic tryptophan protein 2 [Ajellomyces dermatitidis ATCC 18188]
          Length = 919

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/229 (13%), Positives = 83/229 (36%), Gaps = 17/229 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I  L+ S+  I F    + + + +A+ +     +L V+   +      K+ G+  SM   
Sbjct: 289 IHMLSVSQSNIDFV-TMNNSGEWIAFGSSKFGQLL-VWEWQSE-SYILKQQGHLDSMNSL 345

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             +S +G++  I+   D  + ++  +         T       +  +S   + ++F +  
Sbjct: 346 -VYSPDGQKI-ITAADDGKIKVWDTN-SGFCIVTFTEHTSGVTACQFSKKGN-VLFTASL 401

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G  + + +     + +  +     ++      P G+++         F + +      Q
Sbjct: 402 DGSIRAWDL-IRYRNFRTFTAPSRLAFSCLAVDPSGEVVCAGSLD--SFDVHIWSVQTGQ 458

Query: 383 E--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              RL      + + +++  G  L+      G     +    + GR +T
Sbjct: 459 LLDRLAGHQGPVSSLSFAADGSHLV-----SGSWDHTIRIWSIFGRTQT 502



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 62/195 (31%), Gaps = 9/195 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ QK+  A  D +    + + DT             S + A +FS  G   L +   
Sbjct: 347 YSPDGQKIITAADDGK----IKVWDTNSGFCIVTFTEHTSGVTACQFSKKGN-VLFTASL 401

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++       T    +  S   + D S  V  +       +++        
Sbjct: 402 DGSIRAWDL-IRYRNFRTFTAPSRLAFS-CLAVDPSGEVVCAGSLDSFDVHIWSVQTGQL 459

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                  +       ++  G  +    +      I  +         L   ++L +  + 
Sbjct: 460 LDRLAGHQGPVSSLSFAADGSHLVSGSWDHT-IRIWSIFGRTQTSEPLELQADLLSVAFR 518

Query: 399 PSGRSLIFSRKKDGD 413
           P G+ +  +   DG 
Sbjct: 519 PDGKQIA-ASTLDGQ 532


>gi|323451047|gb|EGB06925.1| hypothetical protein AURANDRAFT_28304 [Aureococcus anophagefferens]
          Length = 664

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 72/236 (30%), Gaps = 25/236 (10%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +   S ++   + V   DGA    L   RD     PR SP+  +VAY T+D  ++     
Sbjct: 153 DRKPSEVVNEVVKVALEDGA-ATVLATGRD-FYGAPRLSPDGSRVAYVTWDHPNMPWDAT 210

Query: 242 M----------DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                                  +  + +L   +                  +   D  +
Sbjct: 211 ELRLAAVDGAAPATEGHDLVDGADGDTSVLQCAWHPETAELYYVSDAPGTYVLKKFD-GT 269

Query: 292 NATERLTNTLFINISA----------SYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQKR 340
           +++  L   + +  SA          S+ PD +      DR  G+  L+V+  +GS    
Sbjct: 270 SSSTVLDVGVDLGGSAPGWVFGQQGYSFLPDGAVAAAYPDRATGRTVLHVVAPDGSSAVY 329

Query: 341 ISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              D    ++     +P G L            I          + L   S+ + P
Sbjct: 330 DKDDGLPHAFGGVAPAPDGSLYLLGGGPDTPSGIFHWDPATKVGKKLASSSSAEVP 385



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 49/292 (16%), Positives = 95/292 (32%), Gaps = 50/292 (17%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            SD   Q +   +G   +R+  V+     G  + +   +D  GA   ++   R+      
Sbjct: 99  FSDFGTQRLHATEG-GATRV--VTAGDPEGRYRYADYAVDPSGA---FVVGVRED----- 147

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              P   +         +++   +     D A   +   R    APR S +G R      
Sbjct: 148 -HGPAGDR------KPSEVVNEVVKVALEDGAATVLATGRDFYGAPRLSPDGSRVAYVTW 200

Query: 278 KD-----EAMDIYSVDLQSNATER----LTNTLFINIS---ASYSPDSSQIVFESDREGK 325
                  +A ++    +   A       L +    + S    ++ P+++++ + SD  G 
Sbjct: 201 DHPNMPWDATELRLAAVDGAAPATEGHDLVDGADGDTSVLQCAWHPETAELYYVSDAPGT 260

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWS---------PQGDL-IAFTKFSGEKFAIGV 375
             L       S    +    +     P W          P G +  A+   +  +  + V
Sbjct: 261 YVLKKFD-GTSSSTVLDVGVDLGGSAPGWVFGQQGYSFLPDGAVAAAYPDRATGRTVLHV 319

Query: 376 MKKDGSQERLLVEDSNLQ-----APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +  DGS      +D         AP  +P G   ++      DT S ++  D
Sbjct: 320 VAPDGSSAVYDKDDGLPHAFGGVAP--APDGS--LYLLGGGPDTPSGIFHWD 367


>gi|301756216|ref|XP_002913943.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           [Ailuropoda melanoleuca]
 gi|281352082|gb|EFB27666.1| hypothetical protein PANDA_001794 [Ailuropoda melanoleuca]
          Length = 793

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 465 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEK 524

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 525 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 580

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 581 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 637

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 638 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 692

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 693 HGLMVGELKGHTDTVCSLRFSRDGEILA 720



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 578 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 633

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 634 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 689

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 690 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 731


>gi|259488390|tpe|CBF87791.1| TPA: Protein hir1 [Source:UniProtKB/Swiss-Prot;Acc:Q5BDU4]
           [Aspergillus nidulans FGSC A4]
          Length = 1004

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 80/230 (34%), Gaps = 39/230 (16%)

Query: 220 SPNQQKVAYATYDDEDILRVY----LMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRA 272
           SP+  ++  A  D    +R++    +        PK++    N    I   RFS NGK  
Sbjct: 47  SPDGSRLVTAAGD--GYVRIWSTEAICGAEDANKPKQLASMSNHSGTIHTVRFSPNGKYL 104

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS---------QIVFESDRE 323
             S   D+ + IY++D          N      S  +S DSS         ++V  S   
Sbjct: 105 A-SGADDKIVCIYTLDA---------NPPSHAASFGWSCDSSILVSVGLDSKVVVWSGHT 154

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E+L  +  + S  K I+ D    YF    S    +  F   S    +    + +    
Sbjct: 155 -FEKLKTLSVHQSHVKGITFDPANKYFATA-SDDRTVRIFRFTSPAPNSTAHDQMNNFVL 212

Query: 384 RLLVEDSNLQAP--------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              +      +P        +WSP G  +  +   +G   S +  I+  G
Sbjct: 213 EQTITAPFQNSPLTAYFRRCSWSPDGLHIAAANAVNGP-VSSVAIINRGG 261



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 72/202 (35%), Gaps = 13/202 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             +    +   RFSPN + +A  +  D+ I+ +Y +D          G      +     
Sbjct: 85  MSNHSGTIHTVRFSPNGKYLA--SGADDKIVCIYTLDANPPSHAASFGWSCDSSILVSVG 142

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FES---D 321
            + K  ++         + ++ +  +  + +T        A+ S D +  +  F S   +
Sbjct: 143 LDSK--VVVWSGHTFEKLKTLSVHQSHVKGITFDPANKYFATASDDRTVRIFRFTSPAPN 200

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTK-FSGEKFAIGVMKKD 379
               +Q+       +           +YF    WSP G  IA     +G   ++ ++ + 
Sbjct: 201 STAHDQMNNFVLEQTITAPFQNSPLTAYFRRCSWSPDGLHIAAANAVNGPVSSVAIINRG 260

Query: 380 G--SQERLLVEDSNLQAPTWSP 399
           G      L+  ++ ++   +SP
Sbjct: 261 GWDGDINLIGHEAPVEVCAFSP 282


>gi|255535932|ref|YP_003096303.1| Dipeptidyl peptidase IV [Flavobacteriaceae bacterium 3519-10]
 gi|255342128|gb|ACU08241.1| Dipeptidyl peptidase IV [Flavobacteriaceae bacterium 3519-10]
          Length = 713

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 61/180 (33%), Gaps = 11/180 (6%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEA-MDIYSVDLQSNAT 294
           L VY ++ +        G+    + A  +S + K   +  + +D+  + +   D  +   
Sbjct: 242 LGVYDINAQKTTFLNIEGDKEQYLTAVTWSPDSKYIFVGVLNRDQNHLKMNQYDAATGTL 301

Query: 295 -ERLTNTLFIN-ISAS----YSPDSSQ-IVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            + L        +       + P+S+   +++S R G   L+    +     +I++    
Sbjct: 302 MKTLFEEKSEQYVEPQHQLMFFPNSNTDFIWQSQRTGYNHLFHYHLDKGLVSQITKGDWL 361

Query: 348 SYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 ++ +   I +     S  +  +  +  +  + + L     +     S  G  L 
Sbjct: 362 VTDVLGFNEKKKEIYYASTQQSPLERHLYKINWNNFRTQKLTTAPGMHTGILSKDGSQLY 421



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 91/277 (32%), Gaps = 42/277 (15%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPR--- 218
            +  +  +G F+ +  +          K S      DGA NI+ L  ++           
Sbjct: 97  VKFTSRTQGYFSQKGKYYRLEKSGNDWKTSEWTALNDGAENIQVLADNKSIAYTVKNNLF 156

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            + N + VA  + ++E I+    +                 I A   + N  +       
Sbjct: 157 LNRNGKTVAITSDENEHIVNGQAVHRSEFGIS-------GGIFA---APNSAKIAF---- 202

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDREGKE-QLYVMQSNG 335
                 Y +D        +T+   I+ S   + + +    +  S        +Y + +  
Sbjct: 203 ------YRMD-----ETMVTDYPVIDWSVTPAKNTNIKYPMAGSTSHHVTLGVYDINAQK 251

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNL 392
           +    I  DKE       WSP    I     + ++  + + + D   G+  + L E+ + 
Sbjct: 252 TTFLNIEGDKEQYLTAVTWSPDSKYIFVGVLNRDQNHLKMNQYDAATGTLMKTLFEEKSE 311

Query: 393 Q--AP----TWSPSGRS-LIFSRKKDGDTGSKLYSID 422
           Q   P     + P+  +  I+  ++ G      Y +D
Sbjct: 312 QYVEPQHQLMFFPNSNTDFIWQSQRTGYNHLFHYHLD 348


>gi|194205706|ref|XP_001916305.1| PREDICTED: TAF5 RNA polymerase II, TATA box binding protein
           (TBP)-associated factor, 100kDa [Equus caballus]
          Length = 807

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 479 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEK 538

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 539 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 594

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 595 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 651

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 652 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 706

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 707 HGLMVGELKGHTDTVCSLRFSRDGEILA 734



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 592 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 647

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 648 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 703

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 704 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 745


>gi|194041961|ref|XP_001929370.1| PREDICTED: transcription initiation factor TFIID subunit 5 [Sus
           scrofa]
          Length = 800

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 472 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEK 531

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 587

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 588 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 644

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 645 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 699

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILA 727



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 585 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 696

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 697 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 738


>gi|154319015|ref|XP_001558825.1| hypothetical protein BC1G_02459 [Botryotinia fuckeliana B05.10]
 gi|150856890|gb|EDN32082.1| hypothetical protein BC1G_02459 [Botryotinia fuckeliana B05.10]
          Length = 842

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 91/248 (36%), Gaps = 27/248 (10%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++   FV+ S    + K SL  M  D   +R   P R+        S + +  A A+   
Sbjct: 66  STNEFFVAGSEDGTVSKYSLDTMAFDKFLMRCSLPVRNI-----AISSDGRWCAVAS--- 117

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQ 290
            D L V +++T        + + R  +    F  + K   +S   D  + +YS+   D +
Sbjct: 118 -DELTVKIVNTNDVNHTMYLRDQRKPVKHLSFDPSNKIITLSCT-DGMIYVYSLLNEDPE 175

Query: 291 -----SNATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQD 344
                      +     I+   ++ PD        + R+    + V+  N  +++RI  D
Sbjct: 176 LVKTIDGIIRAVETDDEISSKVAWHPDGRAFAAPTATRD----IQVISRNDWEKQRIFAD 231

Query: 345 KE-ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                     WSP G ++A    +G+   I + +    +     + +N+    W P+   
Sbjct: 232 GHTGDITALAWSPNGAMLA---SAGKDKKILLWETKTQKIIATYDHANVMDLAWHPTDNL 288

Query: 404 LIFSRKKD 411
           L F+    
Sbjct: 289 LSFTNSDG 296


>gi|29828071|ref|NP_822705.1| secreted protein [Streptomyces avermitilis MA-4680]
 gi|29605173|dbj|BAC69240.1| putative secreted protein [Streptomyces avermitilis MA-4680]
          Length = 346

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 55/187 (29%), Gaps = 14/187 (7%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + +       + +    L    +    +      S      F  +G RA +  +   
Sbjct: 158 PSGRWIVSVDLGTDSVRVCILHGGALAVHREIALRPGSGPRHLAFHPDGDRAYVLNELTP 217

Query: 281 AMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQIVFESDREGKEQLYVM 331
            + +   D    A + +  T  +  +            SPD  + V+ + R GK+ + V+
Sbjct: 218 MVTVCRWDPADGALKPVAETPVLPGAPEGDAYPSGIVVSPDG-RFVWTATR-GKDVISVL 275

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                  + ++       +    +  G  +              +       R      +
Sbjct: 276 AVEKDGLRLVTTVPCGGAWPRALTLAGRFLYVANERSGNVTWFAVDPTTGLPRR---GGS 332

Query: 392 LQAPTWS 398
           ++AP  S
Sbjct: 333 IEAPAAS 339


>gi|66807047|ref|XP_637246.1| transcription initiation factor TFIID subunit [Dictyostelium
           discoideum AX4]
 gi|60465657|gb|EAL63736.1| transcription initiation factor TFIID subunit [Dictyostelium
           discoideum AX4]
          Length = 948

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 75/215 (34%), Gaps = 17/215 (7%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                ++   FSP+ Q +   + D     R++ M+T  +    +  NF   +    FS  
Sbjct: 677 GHSGPVYGCSFSPDSQYLLSCSEDT--TARLWSMETMSNLVCYKGHNFP--VWDVSFSPF 732

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G     +   D    +++ +  S      T  L    +  + P+ + +   S+    +  
Sbjct: 733 GFYFA-TASHDRTARLWTTNHIS-PLRIFTGHLSDCNTVRFHPNINYLATGSN---DKSA 787

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            + +       RI     A  +   +SP G L+A    +GE  ++ +      ++   ++
Sbjct: 788 RLWEIQTGKCVRIFMGHRAPIYTVAFSPDGRLLA---TAGEDTSVILWDLSTGKKVKKMD 844

Query: 389 DSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
                  +  +S  G  L        D   +L+ +
Sbjct: 845 GHTKCVYSLDFSCDGSILA---SGSSDCTVRLWDV 876


>gi|147904048|ref|NP_001087073.1| Aladin [Xenopus laevis]
 gi|50415177|gb|AAH77988.1| Aaas-prov protein [Xenopus laevis]
          Length = 523

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 42/133 (31%), Gaps = 9/133 (6%)

Query: 290 QSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            S   + L++       S  +SP    ++  S  +    + V          + +     
Sbjct: 236 SSGCAQVLSHPGHSPVTSVCWSPKGGVLLSASPVD--TAMLVWDVPTESCIPLQRVGGGG 293

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                WSP G  +         F +   +K    ER        Q   WSP G  L+F+ 
Sbjct: 294 VTFLSWSPDGSKVL-AATPSSVFRVWETQKWT-CERWPTLQGRCQTGCWSPDGSRLLFAV 351

Query: 409 KKDGDTGSKLYSI 421
                  S +YS+
Sbjct: 352 ----KGESVIYSL 360



 Score = 43.5 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 70/205 (34%), Gaps = 30/205 (14%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + L+      +    +SP    +  A+   +  + V+ + T      +R+G     +  
Sbjct: 240 AQVLSHPGHSPVTSVCWSPKGGVLLSAS-PVDTAMLVWDVPTESCIPLQRVG--GGGVTF 296

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFES 320
             +S +G + L +        ++    ++      R         +  +SPD S+++F  
Sbjct: 297 LSWSPDGSKVL-AATPSSVFRVW----ETQKWTCERWPTLQGRCQTGCWSPDGSRLLFAV 351

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G+  +Y +  + S+ +  +Q                 + FT  +G    I V     
Sbjct: 352 --KGESVIYSLCFSVSEGE--AQAGVGGSQSATVVADVSEVVFTTHTG---EIRV----- 399

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI 405
                      +Q+  W PSG  L 
Sbjct: 400 --------GGEIQSMCWDPSGERLA 416



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/116 (12%), Positives = 33/116 (28%), Gaps = 8/116 (6%)

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            + +    + +S    +      WSP+G ++           +  +  +       V   
Sbjct: 233 TRPSSGCAQVLSHPGHSPVTSVCWSPKGGVLLSASPVDTAMLVWDVPTESCIPLQRVGGG 292

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN--ETLINTPAYASDPQWVG 444
            +   +WSP G  ++        T S ++ +    +   E             W  
Sbjct: 293 GVTFLSWSPDGSKVL------AATPSSVFRVWETQKWTCERWPTLQGRCQTGCWSP 342



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 47/134 (35%), Gaps = 13/134 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+  KV  AT     + RV+          +R    +       +S +G R L +V+
Sbjct: 298 SWSPDGSKVLAAT--PSSVFRVWETQKWT---CERWPTLQGRCQTGCWSPDGSRLLFAVK 352

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-----EGKEQLYVMQ 332
            +  +      +     +     +  + SA+   D S++VF +        G+ Q     
Sbjct: 353 GESVIYSLCFSVSEGEAQ---AGVGGSQSATVVADVSEVVFTTHTGEIRVGGEIQSMCWD 409

Query: 333 SNGSDQKRISQDKE 346
            +G     + +   
Sbjct: 410 PSGERLAVLLKGNP 423


>gi|66800757|ref|XP_629304.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
 gi|60462685|gb|EAL60887.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
          Length = 2430

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 74/214 (34%), Gaps = 28/214 (13%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALI 274
             FSP Q  +A    D      V L D   +   + +        A     FS +G     
Sbjct: 1790 AFSPTQPLLAVGATD----CTVRLFDVSSNTIYREVAKLHGHTRAITSITFSPSGNLIA- 1844

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSS-QIVFESDREGKEQLY 329
            S  +D  + ++  ++Q++  E  T     N       S++P +  +++  SD        
Sbjct: 1845 STSEDLLIKVW--NVQTHKAEY-TIEKAHND-PINCISFNPTNECELISCSD---DYSTK 1897

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLV 387
            V     +     ++    +    V+SP G  IA         +I V      +   RL  
Sbjct: 1898 VWSRFTTSTTLSTEGSTNTIKHCVYSPDGKYIATVSRD---CSIAVYLCSSKKLLFRLKG 1954

Query: 388  EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                +   T+SP  + L+       D   ++++I
Sbjct: 1955 HTDWVNFCTFSPDSKKLV---SGGWDFNLRVWNI 1985



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/252 (15%), Positives = 84/252 (33%), Gaps = 33/252 (13%)

Query: 198  RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
             +G+ +  L    + I     FS + + +A +++D+     V + D  +     +  +  
Sbjct: 1552 SNGSELLTLVGHSNWISCF-SFSDDGKTLASSSWDN----TVIVWDLIVGNQIHQFKDHS 1606

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDS 313
              +    FS      L+S   D    I   +       R  N    +        +SPD 
Sbjct: 1607 RAVNYCEFSPTANNLLMSCAWD--SSIIIFNTSDKNIFR--NFRSAHSKPVNSCCWSPDG 1662

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDPVWSPQGDLIAFTKFSG 368
            + I   S  +G  +++    +   + R+     +     S     +S     I  T    
Sbjct: 1663 TLIA-SSSWDGTIKIWN-PFDTIAKDRLKHVIDASLSYGSIKSCKFSANSKQILATTMKN 1720

Query: 369  EKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +     V+  D + ++L+        ++   + S  G  ++       D  +K++S  L 
Sbjct: 1721 D-----VLLFDVNSQKLISVMGNHSKSVNHCSLSNDGNYIVTGSD---DATAKVWSSTL- 1771

Query: 425  GRNETLINTPAY 436
            G   T    P  
Sbjct: 1772 GTQLTNFLIPGD 1783



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 57/178 (32%), Gaps = 17/178 (9%)

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            D   + I        A  +S +G     S  KD  + I+     S     + ++ +I+  
Sbjct: 1512 DSCKQTITGLEDGATACCYSRDGSMIA-SAGKDSIIHIFKASNGSELLTLVGHSNWISCF 1570

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             S+S D   +   S       + V      +Q    +D   +     +SP  + +  +  
Sbjct: 1571 -SFSDDGKTLASSS---WDNTVIVWDLIVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCA 1626

Query: 367  SGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                  I     + S + +           + +  WSP G  +  S     D   K++
Sbjct: 1627 WDSSIIIF----NTSDKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSW---DGTIKIW 1677



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 27/204 (13%), Positives = 70/204 (34%), Gaps = 24/204 (11%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            +S +   +A           +++           +    + I    FS +GK    S   
Sbjct: 1530 YSRDGSMIA----SAGKDSIIHIFKASNGSELLTLVGHSNWISCFSFSDDGKTLA-SSSW 1584

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI----VFESDREGKEQLYVMQSN 334
            D  + ++ + +  N   +  +         +SP ++ +     ++S       + +  ++
Sbjct: 1585 DNTVIVWDL-IVGNQIHQFKDHSRAVNYCEFSPTANNLLMSCAWDSS------IIIFNTS 1637

Query: 335  GSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG----VMKKDGSQERLLVED 389
              +  R              WSP G LIA + + G    I      + KD  +  +    
Sbjct: 1638 DKNIFRNFRSAHSKPVNSCCWSPDGTLIASSSWDGT-IKIWNPFDTIAKDRLKHVIDASL 1696

Query: 390  --SNLQAPTWSPSGRSLIFSRKKD 411
               ++++  +S + + ++ +  K+
Sbjct: 1697 SYGSIKSCKFSANSKQILATTMKN 1720



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 76/220 (34%), Gaps = 32/220 (14%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                       + +    FSP+   +A  + D   +++V+ + T          +   + 
Sbjct: 1818 YREVAKLHGHTRAITSITFSPSGNLIASTSEDL--LIKVWNVQTHKAEYTIEKAHNDPIN 1875

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--------YSPD 312
                F+   +  LIS   D +  ++S         R T +  ++   S        YSPD
Sbjct: 1876 -CISFNPTNECELISCSDDYSTKVWS---------RFTTSTTLSTEGSTNTIKHCVYSPD 1925

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD--PVWSPQGDLIAFTKFSGEK 370
               I   S R+    +Y+     S +K + + K  + +     +SP    +      G  
Sbjct: 1926 GKYIATVS-RDCSIAVYLC----SSKKLLFRLKGHTDWVNFCTFSPDSKKLV---SGGWD 1977

Query: 371  FAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSR 408
            F + V      +E   L    S+++   ++   + +I + 
Sbjct: 1978 FNLRVWNIKTQKELLCLKGHSSSIEKAFFTKDQKYIISAS 2017


>gi|307192566|gb|EFN75754.1| WD repeat-containing protein 23 [Harpegnathos saltator]
          Length = 493

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 12/146 (8%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISAS-----YSPDSSQIVFESDREGKEQLYV 330
           + K     +   +  +    +L +    ++  S     +SPD S IV+ S  E   Q  V
Sbjct: 122 ITKYNNSWLRVYNTHNGKFTQLKSIPARDVGWSILDTAFSPDGSTIVYSSWSECLYQCSV 181

Query: 331 MQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +++ + +  +       +  F  V+S  G  I      G    + V  ++  Q  L V 
Sbjct: 182 SENSTTQESLLLGPGVRRFCVFSLVFSNDGREILGGANDG---KLYVYDRECRQRVLRVA 238

Query: 389 DS--NLQAPTWSPSGRSLIFSRKKDG 412
               ++ A  ++ +   + +S   DG
Sbjct: 239 GHYDDVNAVAFADNTSQIFYSAGDDG 264



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 41/103 (39%), Gaps = 13/103 (12%)

Query: 328 LYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           L V  ++     ++    ++D   S  D  +SP G  I ++ +S   +   V +   +QE
Sbjct: 130 LRVYNTHNGKFTQLKSIPARDVGWSILDTAFSPDGSTIVYSSWSECLYQCSVSENSTTQE 189

Query: 384 RLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSID 422
            LL+     +       +S  GR ++      G    KLY  D
Sbjct: 190 SLLLGPGVRRFCVFSLVFSNDGREIL-----GGANDGKLYVYD 227



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 62/187 (33%), Gaps = 18/187 (9%)

Query: 194 CVMDRDGANIRYLT------PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
            +   +  N ++              + +  FSP+   + Y+++ +         ++   
Sbjct: 129 WLRVYNTHNGKFTQLKSIPARDVGWSILDTAFSPDGSTIVYSSWSECLYQCSVSENSTTQ 188

Query: 248 RAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            +       R   + +  FS++G+  L     D    +Y  D +           + +++
Sbjct: 189 ESLLLGPGVRRFCVFSLVFSNDGREIL-GGANDG--KLYVYDRECRQRVLRVAGHYDDVN 245

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A    D++  +F S   G + L  +     D++ +++              G  I +   
Sbjct: 246 AVAFADNTSQIFYS--AGDDGLCKVW----DKRTLTETDPRPVGVLAGHMDG--ITYIDS 297

Query: 367 SGEKFAI 373
            G+   +
Sbjct: 298 RGDSRYL 304


>gi|195481724|ref|XP_002101753.1| GE15442 [Drosophila yakuba]
 gi|194189277|gb|EDX02861.1| GE15442 [Drosophila yakuba]
          Length = 313

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 54/148 (36%), Gaps = 6/148 (4%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE---DILRVYLMD 243
           G    S+ + D        + P  D  + +   SP+ + +A A          L      
Sbjct: 141 GSQNGSVFLWDVKSERHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSQDQK 200

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R  K+I      IL  +FS +  R L++   D  + I+  D        L    + 
Sbjct: 201 MSTLRPTKKIPAHSRYILRCKFSPD-SRLLLTTSGDGTVGIWKTD-DFTKWRELCIENYW 258

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVM 331
              A++S DS  + F +  +G  +L+ +
Sbjct: 259 VWDAAFSADSKWL-FTASSDGIARLWKL 285



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 61/183 (33%), Gaps = 13/183 (7%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G     +  +D  + I+ +        R+ +      +A   P+  +I   S       
Sbjct: 91  DGNWM-FTAGEDHHVRIWDMIAAPPHCSRVFDCEAPVNAACLHPNQVEIAMGSQ---NGS 146

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD------GS 381
           +++        +RI  + +AS  D   SP G  +A     G  +   +  +D        
Sbjct: 147 VFLWDVKSERHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSQDQKMSTLRP 206

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            +++      +    +SP  R L+ +    GD    ++  D   +   L     +  D  
Sbjct: 207 TKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTVGIWKTDDFTKWRELCIENYWVWDAA 263

Query: 442 WVG 444
           +  
Sbjct: 264 FSA 266



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 58/161 (36%), Gaps = 15/161 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            PNQ ++A           V+L D + +R  + +    + I     S +G+    +    
Sbjct: 132 HPNQVEIA----MGSQNGSVFLWDVKSERHERIVPEVDASIQDVAISPDGRYLA-AANNK 186

Query: 280 EAMDIYSVDLQS------NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
               I+S+  Q         T+++       +   +SPDS  ++  S  +G   ++    
Sbjct: 187 GNCYIWSLTSQDQKMSTLRPTKKIPAHSRYILRCKFSPDSRLLLTTSG-DGTVGIWKTD- 244

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           + +  + +  +    + D  +S     + FT  S     + 
Sbjct: 245 DFTKWRELCIENYWVW-DAAFSADSKWL-FTASSDGIARLW 283


>gi|149637996|ref|XP_001511254.1| PREDICTED: similar to WD repeat domain 51B [Ornithorhynchus
           anatinus]
          Length = 538

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 69/212 (32%), Gaps = 17/212 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + Q +A A+ D      + +      R    +    + +   +FS +G+    S  
Sbjct: 121 NFSNDGQFLATASEDK----SIKVWSMHRQRFLYSLFQHTNWVRCAKFSPDGRLIA-SCS 175

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D+ + I+  D  +       T+        S++P+ + +           + +     +
Sbjct: 176 DDKTVKIW--DTTTKLCVNNFTDYEGFANYVSFNPNGTYVA---SAGSDHTVRLWDLRTN 230

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAP 395
              +  Q    +     + P G+ +      G    + +   +G     L      + A 
Sbjct: 231 KLLQHYQVHSGAVNCISFHPSGNYLITASSDGTLKILDL--LEGRLIYTLHGHTGPVLAV 288

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           ++S  G    F+     D    L+  + +  N
Sbjct: 289 SFSKGGEQ--FASG-GADAQVLLWKTNFDAYN 317



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 63/202 (31%), Gaps = 13/202 (6%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   T        + + + +      R G  R  + +  FS  G     S  +D  + +
Sbjct: 40  RIWVVTASASCDTFLMIWNFKPQARAFRYGGHRDALTSVHFSPIGNMVA-SASRDRTVRL 98

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +   ++   +E  T+T     S ++S D   +   S+    + + V   +          
Sbjct: 99  WIPKMKGKFSEFKTHT-APVRSVNFSNDGQFLATASE---DKSIKVWSMHRQRFLYSLFQ 154

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGR 402
                    +SP G LIA          + +             D        +++P+G 
Sbjct: 155 HTNWVRCAKFSPDGRLIASCSDDKT---VKIWDTTTKLCVNNFTDYEGFANYVSFNPNGT 211

Query: 403 SLIFSRKKDGDTGSKLYSIDLN 424
            +        D   +L+ +  N
Sbjct: 212 YVA---SAGSDHTVRLWDLRTN 230


>gi|115609614|ref|XP_787398.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115928839|ref|XP_001189319.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 472

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 34/102 (33%), Gaps = 4/102 (3%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+ P    +V  S R+    + V          + +          +SP    + F    
Sbjct: 252 SWDPRGRLLVSSSPRD--TAILVWDVPREACVPLKRTSGGGVALLRYSPDSSKL-FASSP 308

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            + F +   +     E+        ++  WSP GR L+F  +
Sbjct: 309 SQVFRVWETRTWT-CEKWTQLSGRCKSACWSPDGRFLLFCTE 349



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 15/139 (10%), Positives = 46/139 (33%), Gaps = 12/139 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + L+ +    +    + P  + +  ++        + + D   +            +  
Sbjct: 237 AQVLSHNGHAPITCLSWDPRGRLLVSSS---PRDTAILVWDVPREACVPLKRTSGGGVAL 293

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFES 320
            R+S +  +   +    +   ++    ++      + T       SA +SPD   ++F +
Sbjct: 294 LRYSPDSSKL-FASSPSQVFRVW----ETRTWTCEKWTQLSGRCKSACWSPDGRFLLFCT 348

Query: 321 DREGKEQLYVMQSNGSDQK 339
           + E    ++ +    S  K
Sbjct: 349 EDE--PAIFALNFIHSGSK 365


>gi|317502618|ref|ZP_07960738.1| 6-phosphogluconolactonase [Prevotella salivae DSM 15606]
 gi|315666237|gb|EFV05784.1| 6-phosphogluconolactonase [Prevotella salivae DSM 15606]
          Length = 366

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 60/196 (30%), Gaps = 18/196 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALI 274
           RF+ +   +A   +  + IL      T     P            PR   FS NGK   +
Sbjct: 171 RFTKDGYMLA-TNFSADQILSFKYNKTAGTLTPYSAPVNVDKDSGPRHLTFSPNGKDVYL 229

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YSPDSSQIVFESDREGKEQL 328
             +    +  +     +   +R       +  A        SPD  + V+ S R   + +
Sbjct: 230 MSELSGDITAFHY--ANGLLKRFQTIAADDAKARGGADIHLSPDG-KFVYASTRLKGDGI 286

Query: 329 YVM-QSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +  +       R+ Q     +  + + +P G  +        K  +             
Sbjct: 287 TIFKRLASGKLVRVGQQPTGLHPRNFIITPNGKFVLVACRDANKIQVYARNPQTGLLSDT 346

Query: 387 VEDSNLQAPT---WSP 399
            +D  +Q P    ++P
Sbjct: 347 HQDILVQHPVCVKFAP 362


>gi|198275277|ref|ZP_03207808.1| hypothetical protein BACPLE_01436 [Bacteroides plebeius DSM 17135]
 gi|198271860|gb|EDY96130.1| hypothetical protein BACPLE_01436 [Bacteroides plebeius DSM 17135]
          Length = 826

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 65/188 (34%), Gaps = 30/188 (15%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAP------KRIGNFRSMILAPRFSSNGKRALI 274
           P ++K  Y   D +D    +   T + R        + +      + A   SS+G+  L+
Sbjct: 300 PEEKKEIYEFIDPDDRQPGWRNRTYLARFDVKTGVCQPLTFGYKNVWATDISSDGRFILM 359

Query: 275 SVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE---- 323
                           +Y +D+Q+   E L        +A +SPD  Q++     E    
Sbjct: 360 MASNHRMGKRPTTLFSVYKMDVQTLQVEELVKDDGFLTNAQFSPDGRQVLLAGTPEYLGG 419

Query: 324 -GK------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            GK             QLY+M       + +++    +    VWS   + + FT    + 
Sbjct: 420 IGKNVKEGQTPSMIDNQLYLMDLQSKQIEPLTRTFNPNVMQTVWSAVDNCVYFTAEDRDS 479

Query: 371 FAIGVMKK 378
            A+  +  
Sbjct: 480 IALFRLNP 487



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/258 (14%), Positives = 77/258 (29%), Gaps = 49/258 (18%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + +  +    ++           +    +I   R   L   +     +     Q  
Sbjct: 198 SADGKYLITSYTVTKEGGETISQTKVKELKTGKILATRGETLH--WMPRSVKYYYVRQGV 255

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--------------- 324
              ++ +VD  S   E   + L    +   +P    ++F   ++G               
Sbjct: 256 SGRELVTVDPVSGREEVWVSHL-PEGNFQVAPTEDYLLFTLVQKGPEEKKEIYEFIDPDD 314

Query: 325 -------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---TKFSGEK---- 370
                  +  L          + ++     + +    S  G  I         G++    
Sbjct: 315 RQPGWRNRTYLARFDVKTGVCQPLTF-GYKNVWATDISSDGRFILMMASNHRMGKRPTTL 373

Query: 371 FAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRK-----------KDGDTGS-- 416
           F++  M     Q   LV +D  L    +SP GR ++ +             K+G T S  
Sbjct: 374 FSVYKMDVQTLQVEELVKDDGFLTNAQFSPDGRQVLLAGTPEYLGGIGKNVKEGQTPSMI 433

Query: 417 --KLYSIDLNGRNETLIN 432
             +LY +DL  +    + 
Sbjct: 434 DNQLYLMDLQSKQIEPLT 451


>gi|156743989|ref|YP_001434118.1| hypothetical protein Rcas_4068 [Roseiflexus castenholzii DSM 13941]
 gi|156235317|gb|ABU60100.1| conserved hypothetical protein [Roseiflexus castenholzii DSM 13941]
          Length = 432

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVW-----SP-QGDLIAFTKFSGEKFAIGVMKK 378
             Q+  ++ +G  +K+I+ +   +           SP  G L+   +  G    +     
Sbjct: 81  TGQIVRIERDGVTRKQITNEAPPAPDALAIVQFDVSPVDGTLVYLVQGIGTPPVLVRTDA 140

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFS----RKKDGDTGSKLYSIDLNGRNETLINTP 434
           DG     L++   + AP  +P+G ++        ++ G     LY + + G    LI   
Sbjct: 141 DGGNRATLLDSMPVAAPVIAPNGATMALRVFEDYERPGTYTPGLYLMPVAGGEPRLILAD 200

Query: 435 AYASDPQ 441
             A+DP 
Sbjct: 201 KPATDPS 207



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 57/181 (31%), Gaps = 28/181 (15%)

Query: 280 EAMDIYSVDLQSNATERLTNT--LFIN----ISASYSP-DSSQIVFESDREGKEQLYVMQ 332
           +   I  ++      +++TN      +    +    SP D + +           L    
Sbjct: 80  DTGQIVRIERDGVTRKQITNEAPPAPDALAIVQFDVSPVDGTLVYLVQGIGTPPVLVRTD 139

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIA------FTKFSGEKFAIGVMKKDGSQERLL 386
           ++G +  R +         PV +P G  +A      + +       + +M   G + RL+
Sbjct: 140 ADGGN--RATLLDSMPVAAPVIAPNGATMALRVFEDYERPGTYTPGLYLMPVAGGEPRLI 197

Query: 387 V-------------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +             +    +A  WSP G  L+           +L  +D+       +  
Sbjct: 198 LADKPATDPSIEGGDGRGFEAVAWSPDGTKLLVHAFSLSVELCELAIVDVASGGIVYLAA 257

Query: 434 P 434
           P
Sbjct: 258 P 258



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 50/286 (17%), Positives = 90/286 (31%), Gaps = 64/286 (22%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR----IDR 248
           L   D DG N   L  S    +  P  +PN   +A   ++D +    Y            
Sbjct: 135 LVRTDADGGNRATLLDS--MPVAAPVIAPNGATMALRVFEDYERPGTYTPGLYLMPVAGG 192

Query: 249 APKRI-------------GNFRSMILAPRFSSNGKRA---LISVQKDEAMDIYSVDLQSN 292
            P+ I             G+ R    A  +S +G +      S+   E  ++  VD+ S 
Sbjct: 193 EPRLILADKPATDPSIEGGDGRGFE-AVAWSPDGTKLLVHAFSLSV-ELCELAIVDVASG 250

Query: 293 ATERL----TNTLFINISASYSPDSSQIVFESDREGK----EQLYVMQSNGSDQKRI-SQ 343
               L     N +    +A+++ DS  + F     GK      ++   +       +  +
Sbjct: 251 GIVYLAAPEPNLVAACTAAAWTLDSKAVYFSVANPGKGFNEPGIWRGDAMSGAATSVPIE 310

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEK-----------------FAIGVMKKDGSQERLL 386
             +A    P ++    L AF   +  +                 + +  +   G     L
Sbjct: 311 PSDALLHMPFFAID-RLYAFVSSAPGENPVSSPAADPAELMALSYTMSSVPLTGGAFAAL 369

Query: 387 VEDSNLQAPT-WSPSGR-SLIFSRK-----------KDGDTGSKLY 419
             D++      W+  G  ++IF               DG  G +LY
Sbjct: 370 RSDAHQLYQALWASDGSGAVIFESSDPSAVRLLWLPTDGSPGVELY 415


>gi|120600286|ref|YP_964860.1| peptidase S9B dipeptidylpeptidase IV subunit [Shewanella sp.
           W3-18-1]
 gi|120560379|gb|ABM26306.1| dipeptidyl-peptidase IV. Serine peptidase. MEROPS family S09B
           [Shewanella sp. W3-18-1]
          Length = 760

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 86/301 (28%), Gaps = 89/301 (29%)

Query: 220 SPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------------- 264
           SP+ Q+V Y     D+++   ++ MD +  ++   +   +                    
Sbjct: 66  SPDGQRVTYLAGRKDNQNFYDLWQMDVKTGKSSLLLSADKLASNELSDEEKARRERQRIY 125

Query: 265 --------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                   ++ + K  LI    +    +Y   L  N   +L+        A  SP  + +
Sbjct: 126 GEGIMEYFWADDSKALLIPASGN----LYYFSLVDNRVSQLSIGEGFATDARLSPKGNFV 181

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQGDL 360
            F  D    + LYV+       + ++ D   +  + +                W+P    
Sbjct: 182 SFVRD----QNLYVLDLATKKLEAMTTDGGGAIKNAMAEFVAQEEMDRMTGYWWAPDESA 237

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-------------------------- 394
           IAFT+       +    +  +    L E     A                          
Sbjct: 238 IAFTRIDESGVELVTRNEIYADGIKLTEQRYPYAGKNNVDIALGVVTLKDKAINWVTLND 297

Query: 395 --------PT--WSPSGRSLIF--SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                   P   W P  R L F    +       +L ++D   + +TL+          W
Sbjct: 298 DKSKDIYLPRVNWLPDSRHLSFQWQSRDQHKLDLQLVALDALTKPKTLVK----ERSDAW 353

Query: 443 V 443
           V
Sbjct: 354 V 354



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 60/195 (30%), Gaps = 57/195 (29%)

Query: 261 LAPR---FSSNGKRALISVQKDEA---MDIYSVDLQSNA--------------------- 293
            +PR    S +G+R      + +     D++ +D+++                       
Sbjct: 58  TSPRGLKLSPDGQRVTYLAGRKDNQNFYDLWQMDVKTGKSSLLLSADKLASNELSDEEKA 117

Query: 294 --TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               +      I +   ++ DS  ++  +       LY      +   ++S   E    D
Sbjct: 118 RRERQRIYGEGI-MEYFWADDSKALLIPA----SGNLYYFSLVDNRVSQLS-IGEGFATD 171

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQ 393
              SP+G+ ++F +       + V+     +   +  D                    + 
Sbjct: 172 ARLSPKGNFVSFVRDQ----NLYVLDLATKKLEAMTTDGGGAIKNAMAEFVAQEEMDRMT 227

Query: 394 APTWSPSGRSLIFSR 408
              W+P   ++ F+R
Sbjct: 228 GYWWAPDESAIAFTR 242



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 102/320 (31%), Gaps = 58/320 (18%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR----------DGANI--- 203
           ++ D+    ++  +G      L    + VS +   +L V+D           DG      
Sbjct: 153 SLVDNRVSQLSIGEGFATDARLSPKGNFVSFVRDQNLYVLDLATKKLEAMTTDGGGAIKN 212

Query: 204 ---RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL-----RVYLMDTRIDRAPKRIGN 255
               ++       +    ++P++  +A+   D+  +       +Y    ++         
Sbjct: 213 AMAEFVAQEEMDRMTGYWWAPDESAIAFTRIDESGVELVTRNEIYADGIKLTEQRYPYAG 272

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             ++ +A           +   KD+A++  +++   +    L          ++ PDS  
Sbjct: 273 KNNVDIA---------LGVVTLKDKAINWVTLNDDKSKDIYLPRV-------NWLPDSRH 316

Query: 316 IVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI------AFTKFSG 368
           + F+   R+  +    + +  +  K  +  KE S      +     +       +     
Sbjct: 317 LSFQWQSRDQHKLDLQLVALDALTKPKTLVKERSDAWVNLNNDLHFLKQQSAFIWASERD 376

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--------GRSLIFSRKKDGDTGSKLYS 420
               + +    G  +  L +        W+             + F+ +KD     +LY 
Sbjct: 377 GFNHLYLFDLKGKLKAQLTKGE------WAVDKLEYVDETAGWVYFTGRKDTPIEKQLYR 430

Query: 421 IDLNGRNETLINTPAYASDP 440
           + L G     ++T A   DP
Sbjct: 431 VPLAGGKIERVSTAAGMHDP 450


>gi|71021337|ref|XP_760899.1| hypothetical protein UM04752.1 [Ustilago maydis 521]
 gi|46100995|gb|EAK86228.1| hypothetical protein UM04752.1 [Ustilago maydis 521]
          Length = 669

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 76/234 (32%), Gaps = 29/234 (12%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L  +  DG  +R       + + +  FS + ++   + YD      V L DT        
Sbjct: 405 LWDVYHDGQCLRTFM-GHSKAVRDIAFSNDGRRFLSSGYDR----HVKLWDTETGACLDS 459

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSP 311
             N ++      F  +  +  I +       +   D+ ++   +  T+ L    + ++  
Sbjct: 460 FSNGKT-AYCLTFHPDADKQHIFLAGMSDKKVLQWDINTHTVTQEYTSHLGAVNTITFVD 518

Query: 312 DSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + + V  SD    R     + V+       K I+     S      SP G  +A     
Sbjct: 519 QNRRFVTTSDDKTMRGWDYDIPVV------IKYIADPTMHSMPAVTLSPSGKWLAAQSMD 572

Query: 368 GEKFAIGVMKKDG--SQERLLVEDSNL----QAPTWSPSGRSLIFSRKKDGDTG 415
                I     DG     + + +  N+        +SP G+   F    DG+  
Sbjct: 573 N---QILTFASDGFKQNRKKVFKGHNVAGFGCQVGFSPDGK---FLSSGDGEGN 620


>gi|332848007|ref|XP_001174396.2| PREDICTED: LOW QUALITY PROTEIN: notchless protein homolog 1 isoform
           2 [Pan troglodytes]
          Length = 485

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 60/176 (34%), Gaps = 22/176 (12%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           + R    +      +++  FS  GK    S   D  +  + +  ++             +
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDLSTETPHXT-CKGHRHWVL 160

Query: 306 SASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEA------SYFDPVWSPQ 357
           S S+SPD  ++       G    Q+ +   +   Q   +    +      S+     +P+
Sbjct: 161 SISWSPDGKKLA-----SGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPE 215

Query: 358 GDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
              +A +   G    + +     G  ER+L     ++    W   G  L++S  +D
Sbjct: 216 CRYVASSSKDGS---VRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 266



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 396

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 455

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 456 ADEVYAVDWSPDGQRVA 472



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 50/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D                +    +SP+ +K+A      ++   +    + 
Sbjct: 131 SGSGDTTVRFWDLSTETPHXTCKGHRHWVLSISWSPDGKKLA---SGCKNGQILLWDPST 187

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ I+           LT  
Sbjct: 188 GKQVGRTLAGHSKWITGLSWEPLHANPECRYVA-SSSKDGSVRIWDT-TAGRCERILTGH 245

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 246 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 302 RTGAFEPAEASVNPQDLQGSLQKLKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 358

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 359 AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 396

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 397 KLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAM 450

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 451 DLPGHADEVYAVDWSPDGQRVA 472



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 49/158 (31%), Gaps = 22/158 (13%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            A  R T++L  +  A    ++SP    +   S   G   +     +        +    
Sbjct: 101 RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGS---GDTTVRFWDLSTETPHXTCKGHRH 157

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTW-----SP 399
                 WSP G  +A    +G    I +            L      +   +W     +P
Sbjct: 158 WVLSISWSPDGKKLASGCKNG---QILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANP 214

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             R +  S  KDG    +++     GR E ++     +
Sbjct: 215 ECRYVA-SSSKDGSV--RIWDTTA-GRCERILTGHTQS 248


>gi|324998080|ref|ZP_08119192.1| peptide hydrolase [Pseudonocardia sp. P1]
          Length = 613

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 85/265 (32%), Gaps = 12/265 (4%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSP-NQQKVAYATY 231
           +  +L +S S        SL V+D DG  +             P  F+P    +    ++
Sbjct: 178 DETLLAISHSEHGDSRHPSLRVLDLDGGGVVGELHDGPGKGLAPLEFAPVAGDQRLLVSH 237

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           +      + + D       +   +    ++   F  +    LI+        ++  DL +
Sbjct: 238 ERRGREELLIWDPTTGAVTELEIDLPGELVG-GFYPDASALLIAHTHAARTRLFRYDLAT 296

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                L        SA    D +     S      Q+  ++ +G+D   ++   E     
Sbjct: 297 GTPVELATAPGCVGSAEVRADGTVEYSSSSAATPSQIRALRPDGTDDVLVAPPGERPPGS 356

Query: 352 ----PVWS--PQGD---LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                VW+  P GD   L+     +G++ A  V    G       +  +    TW  +G 
Sbjct: 357 LPVRDVWTTGPGGDVHTLVTEAPRTGDRPAPAVFVLHGGPHAADEDRFDAGRATWVDAGF 416

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRN 427
           +++    +        +   + GR 
Sbjct: 417 TVVEINYRGSTGYGSAWRDAIEGRP 441



 Score = 43.1 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 52/171 (30%), Gaps = 8/171 (4%)

Query: 263 PRFSSNG-KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           P ++ +   R           +I+  D  S    ++T+      SA   PD   + + +D
Sbjct: 34  PDWALDAPHRTAYVSNATGTFEIHVWDRDSGEHRQVTDRRNGTTSAVLPPDGEHLWWFAD 93

Query: 322 REGKE------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            +G E      Q +   +    +  +    +          +   +  +   G    +  
Sbjct: 94  TDGDEFGHWVAQPWSAAAGAPTEPAVPGAGDGYPAGLEIGRRRTAVGVSTDDGTTLLVHE 153

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNG 425
               G    +     +      S     L  S  + GD+    L  +DL+G
Sbjct: 154 RGSAGPARVVYRHTEDAGVGALSEDETLLAISHSEHGDSRHPSLRVLDLDG 204


>gi|282877748|ref|ZP_06286563.1| hypothetical protein HMPREF0650_1423 [Prevotella buccalis ATCC
           35310]
 gi|281300320|gb|EFA92674.1| hypothetical protein HMPREF0650_1423 [Prevotella buccalis ATCC
           35310]
          Length = 306

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 62/199 (31%), Gaps = 28/199 (14%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S  G   L+S   +    +   DL +  T++LT+      +   S D  QI++      
Sbjct: 43  LSPVGDYILLSTASNNG--LVKFDLSTGKTQKLTSGKGTGFNVKISNDGKQILYPESSYS 100

Query: 325 KEQLYVM-----QSNGSDQKRISQDKE-------ASYFDPVWSPQGDLIAFTKFSGEKFA 372
           K  L  +       +    +++ +                V       +  T+       
Sbjct: 101 KNNLRRVSLNAIDLSTGKTQQLVKPSRNLQGYSIGGATVSVVKDNKQKL--TRLQPNAVK 158

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF-SRKKDGDTGSKLYSI--------DL 423
              M     + R L+     +   +SP+G+   +       D    LY +        DL
Sbjct: 159 RFEMPTLSVKNRQLLITKGGKTQVFSPNGKQFSYIWPSVSPDGTKALYYVCGVGAFVCDL 218

Query: 424 NGRNETLINTPAYASDPQW 442
           NG N   + T      P+W
Sbjct: 219 NGSNLKSLGT---LRAPRW 234



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 52/162 (32%), Gaps = 28/162 (17%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRALISVQKDEAMD 283
           A   ++   +               ++ +      +   P  S +G +AL  V    A  
Sbjct: 156 AVKRFEMPTLSVKNRQLLITKGGKTQVFSPNGKQFSYIWPSVSPDGTKALYYVCGVGA-- 213

Query: 284 IYSVDLQSNATERLTNTLFINISASY----------SPDSSQIVFESDREGKEQLYVMQS 333
            +  DL  +  + L           +            D  + V+ S         ++  
Sbjct: 214 -FVCDLNGSNLKSLGTLRA----PRWYNNDVIIGMNDQDDGEYVYASS--------IVAK 260

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + S Q+++  D       P  + +GD I F+  +GE + I +
Sbjct: 261 SLSGQEQVLTDDSVIAMYPYTTLKGDKIVFSTPAGEAYMIDI 302


>gi|297584716|ref|YP_003700496.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Bacillus selenitireducens MLS10]
 gi|297143173|gb|ADH99930.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Bacillus selenitireducens MLS10]
          Length = 670

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 107/309 (34%), Gaps = 42/309 (13%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
               +  R++   I+D I           +S+ L+  E+ ++G  +    +         
Sbjct: 7   TVQESDIRQV-RIIADPILHP--------DSQDLYFIETTITGDNQYLTHLYLHQKHAEP 57

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
               S  + + +PR SP+ Q + Y    +        +   +     ++      + A  
Sbjct: 58  LALTSGPRGIRQPRLSPDGQAILYIRKPESSDQPQVFIQQLLGGEGVQVTQLPKGVQAAE 117

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----FES 320
           ++S+     I+ + ++      +D     + +       +   + S     IV    ++S
Sbjct: 118 WASDKDHLFITAKLNDTEKGEMMDAFPGDSRK------DDSKKNESSKQPYIVTRLDYKS 171

Query: 321 DREG-KEQLYVMQSN---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-- 374
           D  G K++   M +     + Q +I     A +    +  + + I  T   GE + +   
Sbjct: 172 DAAGFKDETCSMVAKLTLSTGQMQILTPFGADHQFQDYHQESNCILITANRGEDWEVRSD 231

Query: 375 ---------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD--GDTGSKLYSIDL 423
                    + + D S   L V+ +          G  L+ + +K   G T + L+ +  
Sbjct: 232 LYEVSLDESLSETDHSGSGLTVQRAAYY------DGNILLLAHEKTYLGATHNDLWMMRR 285

Query: 424 NGRNETLIN 432
           +G+ +  + 
Sbjct: 286 SGKEKQNLT 294


>gi|50302561|ref|XP_451216.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|74690513|sp|Q6CXX3|HIR1_KLULA RecName: Full=Protein HIR1
 gi|49640347|emb|CAH02804.1| KLLA0A04928p [Kluyveromyces lactis]
          Length = 861

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 72/226 (31%), Gaps = 46/226 (20%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-------------FRSMILAPRFS 266
           SP+ Q++A    D +  +       +    P    +                 +   +FS
Sbjct: 26  SPDSQRLATGGLDGKIRIWSIPDILKFASNPNASTDKDILMKPLSTMSRHAGSVTTVKFS 85

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT---------------ERLTNTLFINISASYSP 311
            +GK    S   D  + I+ ++  +                   RL           ++P
Sbjct: 86  PDGKYLA-SGSDDRILLIWELEGGTTQPMFGAESTDIEHWNVRRRLVAHDNDIQDICWAP 144

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEK 370
           DSS +V      G ++  ++ +  + +K    D   S+   V + P     A T      
Sbjct: 145 DSSIMVSV----GLDRAIIIWNGSTFEKVKRFDVHQSHVKGVVFDPANKYFA-TASDDRT 199

Query: 371 FAIGVMKKDG----SQERLLVE-------DSNLQAPTWSPSGRSLI 405
             +    K G    S E ++ E        +  +  +WSP G+ + 
Sbjct: 200 IKMFRYHKTGETSFSVEHVITEPFKGSPLTTYFRRLSWSPDGQHIA 245



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 77/233 (33%), Gaps = 34/233 (14%)

Query: 218 RFSPNQQKVAYATYDD------------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +FSP+ + +A  + D             + +      D       +R+    + I    +
Sbjct: 83  KFSPDGKYLASGSDDRILLIWELEGGTTQPMFGAESTDIEHWNVRRRLVAHDNDIQDICW 142

Query: 266 SSNGK--------RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           + +          RA+I         +   D+  +  + +         A+ S D +  +
Sbjct: 143 APDSSIMVSVGLDRAIIIWNGSTFEKVKRFDVHQSHVKGVVFDPANKYFATASDDRTIKM 202

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVM 376
           F   + G+    V        K         +    WSP G  IA     +G    + ++
Sbjct: 203 FRYHKTGETSFSVEHVITEPFKG--SPLTTYFRRLSWSPDGQHIAAPNAMNGPVSTVAII 260

Query: 377 KKDG--SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           ++    S   L+  D   +  +++P     IF R+KD  T   +     +G+ 
Sbjct: 261 ERGTWESPVSLVGHDQPTEVASFNPR----IFKRQKDDSTTDTI-----DGKK 304


>gi|317149246|ref|XP_001823239.2| hypothetical protein AOR_1_714114 [Aspergillus oryzae RIB40]
          Length = 389

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 57/155 (36%), Gaps = 8/155 (5%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSP 311
              S++   +FS++GK   +    D A+ I  V   +            +   +   + P
Sbjct: 72  THDSIVNCVQFSNDGKYIAV-GCADGAVQIVEVSTGTQVARLQDEGYSHDCLCVRVRFLP 130

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D + ++  +  +G   + V    GS  +RI    E  +F    S  G LIAF++ +    
Sbjct: 131 D-NYLLLTAHSDGN--IRVWNYMGSLLRRIPCGSETGFFTLDLSATGHLIAFSERNKTVK 187

Query: 372 AIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLI 405
           A  +    G  Q   L    ++     SP    + 
Sbjct: 188 AWDLDAASGIRQLGTLHTADDVYIVAVSPDSGYIA 222



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 84/229 (36%), Gaps = 27/229 (11%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            D I+   +FS + + +A    D    +      T++ R      +   + +  RF  + 
Sbjct: 73  HDSIVNCVQFSNDGKYIAVGCADGAVQIVEVSTGTQVARLQDEGYSHDCLCVRVRFLPD- 131

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINISASYSPDSSQIVFESDREG 324
              L++   D  + ++  +   +   R+     T    +++SA+       I F S+R  
Sbjct: 132 NYLLLTAHSDGNIRVW--NYMGSLLRRIPCGSETGFFTLDLSAT----GHLIAF-SERNK 184

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD----- 379
             + + + +    ++  +       +    SP    IA     G  +       D     
Sbjct: 185 TVKAWDLDAASGIRQLGTLHTADDVYIVAVSPDSGYIAAGCDDGMIYIWRADSLDPGTAS 244

Query: 380 ---GSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                 E++L     D N+ A +++P  RS+I       D  +KL++ID
Sbjct: 245 ASGTKIEKVLEFQAHDENVMALSFTPDCRSII---SGGMDGTAKLWNID 290


>gi|239624056|ref|ZP_04667087.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239522087|gb|EEQ61953.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 364

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 55/195 (28%), Gaps = 20/195 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAP--KRIGNFRSMILAPR---FSSNGKRALI 274
           SP+ + +  A    + +      +      P       +      PR   FS +G+   +
Sbjct: 161 SPDGKTLFVADLGTDRLYHYRWDEASQGPVPCEACPETYVGPGEGPRHMCFSPDGRYLYL 220

Query: 275 SVQKDEAMDIYSVDLQSNATE---RLTNTLFINISAS------YSPDSSQIVFESDREGK 325
             +    +  Y    +        ++ +        +       S D   + + S+R G 
Sbjct: 221 VTELKGNVFCYQYSSEDGHLTFVQKVPSLPASYTGFNLAADIHLSSDGRYL-YVSER-GA 278

Query: 326 EQLYVMQSNGS----DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           + + V Q +         R       S  +   SP G  I           I        
Sbjct: 279 DIISVFQVDRETGLLGTCRFQLCGGKSPRNFCLSPCGRYIVAANQDSGNLVIFRRNAQDG 338

Query: 382 QERLLVEDSNLQAPT 396
               +VE+  + +P 
Sbjct: 339 LLGEVVEEIRIPSPV 353



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/261 (11%), Positives = 71/261 (27%), Gaps = 32/261 (12%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
               R  +V+E  + G     + +      N   +T      +      P+       + 
Sbjct: 80  AGQGRFTYVNEMPIPGSAACHVLIWKE--KNCLVITNYLSGSMVNHALLPDG------SI 131

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              +    Y       R    +        +   S +GK   ++    + +  Y  D  S
Sbjct: 132 GARNGFFQY-----EGRGEDPVRQEGPHAHSSILSPDGKTLFVADLGTDRLYHYRWDEAS 186

Query: 292 NATERLTNTLFINISA-------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--- 341
                        +          +SPD   +   ++ +G    Y   S       +   
Sbjct: 187 QGPVPCEACPETYVGPGEGPRHMCFSPDGRYLYLVTELKGNVFCYQYSSEDGHLTFVQKV 246

Query: 342 -----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER----LLVEDSNL 392
                S        D   S  G  +  ++   +  ++  + ++          L    + 
Sbjct: 247 PSLPASYTGFNLAADIHLSSDGRYLYVSERGADIISVFQVDRETGLLGTCRFQLCGGKSP 306

Query: 393 QAPTWSPSGRSLIFSRKKDGD 413
           +    SP GR ++ + +  G+
Sbjct: 307 RNFCLSPCGRYIVAANQDSGN 327


>gi|224061694|ref|XP_002193166.1| PREDICTED: putative recombination protein REC14 [Taeniopygia
           guttata]
 gi|197127190|gb|ACH43688.1| putative recombination protein REC14 [Taeniopygia guttata]
          Length = 305

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  ++  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 113 AFSPDSQYLATGSHVGK----VNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 168 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 223

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 224 LAGTLSGHGSWVLNVAFCPD 243



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 92/284 (32%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQV-LVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W   G Q+ +V+  +   G       L    RLWD++  KQI  K   + P     +A 
Sbjct: 57  QWTLEGHQLGVVSVDISHTGAIAASSSLDAHIRLWDLETGKQI--KSIDAGPVDAWSLA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D                   S+ + +G     + +   +     Y   +R + +  
Sbjct: 114 -FSPD-------------------SQYLATGSHVGKVNIFGVETGKKEYSLDTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L+      ++ ++ PD +           + + V  +
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LSGHGSWVLNVAFCPDDTHF---VSSSSDKSVKVWDA 261

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I +  
Sbjct: 262 GTRTCVHTFFDHQDQVWGVKYNGSGSKIVSV---GDDQEIHIYD 302



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 57/200 (28%), Gaps = 12/200 (6%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           ++++        +     S      A ++ D      + L D    +  K I        
Sbjct: 55  DLQWTLEGHQLGVVSVDISHTGAIAASSSLD----AHIRLWDLETGKQIKSIDAGPVDAW 110

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFES 320
           +  FS + +    +      ++I+ V+        L T   FI +S +YSPD   +    
Sbjct: 111 SLAFSPDSQYLA-TGSHVGKVNIFGVE-TGKKEYSLDTRGKFI-LSIAYSPDGKYLA--- 164

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + +            +          +SP   L+      G      V   + 
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224

Query: 381 SQERLLVEDSNLQAPTWSPS 400
           +   L    S +    + P 
Sbjct: 225 AG-TLSGHGSWVLNVAFCPD 243


>gi|120437536|ref|YP_863222.1| secreted prolyl oligopeptidase family protein [Gramella forsetii
           KT0803]
 gi|117579686|emb|CAL68155.1| secreted prolyl oligopeptidase family protein [Gramella forsetii
           KT0803]
          Length = 765

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 350 FDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIF 406
           +    SP G  IA+ K     +  + + +    +E LL E     ++   W+ + R +++
Sbjct: 159 YSFQLSPDGKYIAYMKRRKTGERDLYLKETATQKESLLKEQGEDLIRGFYWANNNR-ILY 217

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLIN 432
            + K G+    +Y ++++G N   + 
Sbjct: 218 LQDKGGNENYHVYGVNIDGENSKELT 243



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 92/233 (39%), Gaps = 17/233 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +AY          +YL +T   +          +I    ++ N  R L    K 
Sbjct: 164 SPDGKYIAYMKRRKTGERDLYLKETATQKESLLKEQGEDLIRGFYWA-NNNRILYLQDKG 222

Query: 280 E--AMDIYSVDLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDREGKEQ--LYVMQS 333
                 +Y V++    ++ LT    + ++   S   D   ++ + +++  +Q   Y +  
Sbjct: 223 GNENYHVYGVNIDGENSKELTPFDGVRVNIIESLKEDEEHVIVQMNKDNPQQEEPYRLNV 282

Query: 334 NGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDS 390
           N  +  ++    + EA      +  +G+L A T+         + + +G  +R+ L E  
Sbjct: 283 NTGEVTKLYTVNEGEAPIAGYNFDRKGNLRAITRIVDGIKTELLYEMEGEFKRVKLTEFG 342

Query: 391 NLQA-PTW-----SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           +  A  ++     +P    +I S  +D  T  +LY +  N + +T+ +   + 
Sbjct: 343 DTFAISSFNPNTENPDDAYVI-SNLEDDKTEIQLYDLKQNKKIKTVFSNDTFD 394


>gi|71043902|ref|NP_001020914.1| WD repeat-containing protein 61 [Rattus norvegicus]
 gi|81907874|sp|Q4V7A0|WDR61_RAT RecName: Full=WD repeat-containing protein 61
 gi|66910939|gb|AAH98059.1| WD repeat domain 61 [Rattus norvegicus]
 gi|149041708|gb|EDL95549.1| WD repeat domain 61 [Rattus norvegicus]
          Length = 305

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 91/284 (32%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQ+  K   + P     +A 
Sbjct: 57  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQM--KSIDAGPVDAWTLA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 114 -FSPDSQHLAT---GTHMGKVNI--FGVESGKKEYSL--------------DTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L+      ++ ++ PD +           + + V   
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTHF---VSSSSDKSVKVWDV 261

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I V  
Sbjct: 262 GTRTCIHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHVYD 302


>gi|197102232|ref|NP_001124648.1| notchless protein homolog 1 [Pongo abelii]
 gi|146345469|sp|Q5RFF8|NLE1_PONAB RecName: Full=Notchless protein homolog 1
 gi|55725268|emb|CAH89499.1| hypothetical protein [Pongo abelii]
          Length = 485

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 158

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEA------SYFDPVWS 355
            +S S+SPD  ++       G    Q+ +   +   Q   +    +      S+     +
Sbjct: 159 VLSISWSPDGKKLA-----SGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHAN 213

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + +     G  ER+L     ++    W   G  L++S  +D
Sbjct: 214 PECRYVASSSKDGS---VRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 266



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 396

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 455

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 456 ADEVYAVDWSPDGQRVA 472



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 131 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA---SGCKNGQILLWDPST 187

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ I+           LT  
Sbjct: 188 GKQVGRTLAGHSKWITGLSWEPLHANPECRYVA-SSSKDGSVRIWDT-TAGRCERILTGH 245

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 246 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 31/207 (14%), Positives = 64/207 (30%), Gaps = 44/207 (21%)

Query: 75  RSDVFNLISQDSFKQKITN------PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           R+  F         Q +          ++ R+      G + LV+G              
Sbjct: 302 RTGAFEPAEASVNPQDLQGSLQELKERALSRYNLMRGQGPERLVSGS--------DDFTL 353

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            LW   + K+ +           R   H     I Q +       +SRI+       S  
Sbjct: 354 FLWSPAEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASAS 391

Query: 189 IKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              S+ +   DG   +YL         +++  +S + + +   + D      + + D + 
Sbjct: 392 FDKSIKLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKA 445

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +    +      + A  +S +G+R  
Sbjct: 446 QKLAMDLPGHADEVYAVDWSPDGQRVA 472


>gi|332216135|ref|XP_003257199.1| PREDICTED: POC1 centriolar protein homolog A isoform 2 [Nomascus
           leucogenys]
          Length = 359

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 85/233 (36%), Gaps = 18/233 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 31  TKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAITCVNFSPSGHLLASGSRD--KTVRIW 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+   ++   D+ + +++   Q      L+  
Sbjct: 89  VPNVKGESTAFR--AHTATVRSVHFCSDGQS-FVTASDDKTVKVWATHRQ-KFLFSLSQH 144

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +   +  +      +  +      + P G  
Sbjct: 145 INWVRCAKFSPDGRLIVSASD---DKTVKLWDKSSRECVHSYCEHGSFVTYVDFHPSGTC 201

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
           IA            V        RLL    +  + +   ++ PSG  LI +  
Sbjct: 202 IAAAGMDNTVKVWDV-----RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 249



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 74/261 (28%), Gaps = 33/261 (12%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           ++R   H   D I        G            + SG    ++ +   +         +
Sbjct: 54  AYRFTGHK--DAITCVNFSPSG----------HLLASGSRDKTVRIWVPNVKGESTAFRA 101

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    F  + Q    A+ D      V +  T   +    +    + +   +FS +G
Sbjct: 102 HTATVRSVHFCSDGQSFVTASDDK----TVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 157

Query: 270 KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R ++S   D+ + ++  D  S                  + P  + I           +
Sbjct: 158 -RLIVSASDDKTVKLW--DKSSRECVHSYCEHGSFVTYVDFHPSGTCIAAAGM---DNTV 211

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V         +  Q   A+     + P G+ +           + +M     + RLL  
Sbjct: 212 KVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLM-----EGRLLYT 266

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
               Q P       ++ FSR 
Sbjct: 267 LHGHQGPA-----TTVAFSRT 282


>gi|332216133|ref|XP_003257198.1| PREDICTED: POC1 centriolar protein homolog A isoform 1 [Nomascus
           leucogenys]
          Length = 407

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 85/233 (36%), Gaps = 18/233 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 31  TKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAITCVNFSPSGHLLASGSRD--KTVRIW 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+   ++   D+ + +++   Q      L+  
Sbjct: 89  VPNVKGESTAFR--AHTATVRSVHFCSDGQS-FVTASDDKTVKVWATHRQ-KFLFSLSQH 144

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +   +  +      +  +      + P G  
Sbjct: 145 INWVRCAKFSPDGRLIVSASD---DKTVKLWDKSSRECVHSYCEHGSFVTYVDFHPSGTC 201

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
           IA            V        RLL    +  + +   ++ PSG  LI +  
Sbjct: 202 IAAAGMDNTVKVWDV-----RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 249



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 74/261 (28%), Gaps = 33/261 (12%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           ++R   H   D I        G            + SG    ++ +   +         +
Sbjct: 54  AYRFTGHK--DAITCVNFSPSG----------HLLASGSRDKTVRIWVPNVKGESTAFRA 101

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    F  + Q    A+ D      V +  T   +    +    + +   +FS +G
Sbjct: 102 HTATVRSVHFCSDGQSFVTASDDK----TVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 157

Query: 270 KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R ++S   D+ + ++  D  S                  + P  + I           +
Sbjct: 158 -RLIVSASDDKTVKLW--DKSSRECVHSYCEHGSFVTYVDFHPSGTCIAAAGM---DNTV 211

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V         +  Q   A+     + P G+ +           + +M     + RLL  
Sbjct: 212 KVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLM-----EGRLLYT 266

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
               Q P       ++ FSR 
Sbjct: 267 LHGHQGPA-----TTVAFSRT 282


>gi|261202590|ref|XP_002628509.1| periodic tryptophan protein 2 [Ajellomyces dermatitidis SLH14081]
 gi|239590606|gb|EEQ73187.1| periodic tryptophan protein 2 [Ajellomyces dermatitidis SLH14081]
          Length = 916

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 75/211 (35%), Gaps = 16/211 (7%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + + +A+ +     +L V+   +      K+ G+  SM     +S +G++  I+   D 
Sbjct: 304 NSGEWIAFGSSKFGQLL-VWEWQSE-SYILKQQGHLDSMNSL-VYSPDGQKI-ITAADDG 359

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + ++  +         T       +  +S   + ++F +  +G  + + +     + + 
Sbjct: 360 KIKVWDTN-SGFCIVTFTEHTSGVTACQFSKKGN-VLFTASLDGSIRAWDL-IRYRNFRT 416

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWS 398
            +     ++      P G+++         F + +      Q   RL      + + +++
Sbjct: 417 FTAPSRLAFSCLAVDPSGEVVCAGSLD--SFDVHIWSVQTGQLLDRLAGHQGPVSSLSFA 474

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             G  L+      G     +    + GR +T
Sbjct: 475 ADGSHLV-----SGSWDHTIRIWSIFGRTQT 500



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 62/195 (31%), Gaps = 9/195 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ QK+  A  D +    + + DT             S + A +FS  G   L +   
Sbjct: 345 YSPDGQKIITAADDGK----IKVWDTNSGFCIVTFTEHTSGVTACQFSKKGN-VLFTASL 399

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++       T    +  S   + D S  V  +       +++        
Sbjct: 400 DGSIRAWDL-IRYRNFRTFTAPSRLAFS-CLAVDPSGEVVCAGSLDSFDVHIWSVQTGQL 457

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                  +       ++  G  +    +      I  +         L   ++L +  + 
Sbjct: 458 LDRLAGHQGPVSSLSFAADGSHLVSGSWDHT-IRIWSIFGRTQTSEPLELQADLLSVAFR 516

Query: 399 PSGRSLIFSRKKDGD 413
           P G+ +  +   DG 
Sbjct: 517 PDGKQIA-ASTLDGQ 530


>gi|196231162|ref|ZP_03130022.1| Fibronectin type III domain protein [Chthoniobacter flavus
           Ellin428]
 gi|196224992|gb|EDY19502.1| Fibronectin type III domain protein [Chthoniobacter flavus
           Ellin428]
          Length = 715

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 71/225 (31%), Gaps = 26/225 (11%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY-----LTPSRDQILFEPRF 219
            +     D    ++      V     +   VM+ DG          +   +   L     
Sbjct: 181 KLFRPSLDGKKFLVRQLGVPVGDTKHSFALVMNADGTGAIQRIDLGVMDGQIWFLKRADH 240

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S       +   +       ++ +   D A  +IG    M   P  S  G RA  S Q  
Sbjct: 241 S-----FTFNRSEGGGDRAQWMCEPEKDGAIHQIG--PYMFYHPSISPLGTRAA-SGQAR 292

Query: 280 EAMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               +++ DL + ++++L               S++ D   +V          +Y +Q +
Sbjct: 293 TPKALWTTDLDTGSSKQLVFVSDEESRVGGGHFSWAVDEKWLV----GSIGNGIYEVQVD 348

Query: 335 GSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
             +++ +    +Q    +  +P  SP G  +A+           +
Sbjct: 349 SGERRLLCVPNTQHSARAESEPESSPDGTKVAYNSTMLGDCDAYI 393



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/256 (17%), Positives = 81/256 (31%), Gaps = 40/256 (15%)

Query: 129 RLWDVKD--------RKQIIGKKFFSSPASWR--KIAHTIS-----DDIYQSITGEKGDF 173
           +LWD+          R  + GKKF             H+ +     D        + G  
Sbjct: 169 QLWDLSQEPGELKLFRPSLDGKKFLVRQLGVPVGDTKHSFALVMNADGTGAIQRIDLGVM 228

Query: 174 NSRILFV-------SESVVSGIIKNSLCVMDR--DGANIRYLTPSRDQILFEPRFSPNQQ 224
           + +I F+       + +   G    +  + +   DGA    +      + + P  SP   
Sbjct: 229 DGQIWFLKRADHSFTFNRSEGGGDRAQWMCEPEKDGA----IHQIGPYMFYHPSISPLGT 284

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS--SNGKRALISVQKDEAM 282
           + A         L    +DT   +    + +  S +    FS   + K  + S+      
Sbjct: 285 RAASGQARTPKALWTTDLDTGSSKQLVFVSDEESRVGGGHFSWAVDEKWLVGSIGNG--- 341

Query: 283 DIYSVDLQSNATERL----TNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            IY V + S     L    T            SPD +++ + S   G    Y+      D
Sbjct: 342 -IYEVQVDSGERRLLCVPNTQHSARAESEPESSPDGTKVAYNSTMLGDCDAYIAVQKLPD 400

Query: 338 QKR-ISQDKEASYFDP 352
             R + ++     +DP
Sbjct: 401 PPRNVRREGRTLTWDP 416



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 45/343 (13%), Positives = 93/343 (27%), Gaps = 92/343 (26%)

Query: 175 SRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQ---ILFEP---RFSPNQQKVA 227
           + I  +S +        S L V + DG+ +  L+    Q    L  P   R+ P      
Sbjct: 77  TVIWKMSHNPGYNYHAYSNLRVWNLDGSRLLLLSTRPKQPRAWLVSPNGDRWMPTPSDDT 136

Query: 228 YATYDDED---------ILRVYLMDTRIDRAPKR--IGNFRSMILAPRFSSNGKRA---- 272
           +  + + D           R++  D    ++ +   +      +   R S +GK+     
Sbjct: 137 WTYWSELDKDHLIYADTHRRIFENDVSTGKSRQLWDLSQEPGELKLFRPSLDGKKFLVRQ 196

Query: 273 ------------LISVQKDEAMDIYSVDLQ-----------------------SNATERL 297
                        + +  D    I  +DL                             + 
Sbjct: 197 LGVPVGDTKHSFALVMNADGTGAIQRIDLGVMDGQIWFLKRADHSFTFNRSEGGGDRAQW 256

Query: 298 TNTLFIN-----------ISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQ-- 343
                 +              S SP  ++    S +    + L+    +    K++    
Sbjct: 257 MCEPEKDGAIHQIGPYMFYHPSISPLGTRAA--SGQARTPKALWTTDLDTGSSKQLVFVS 314

Query: 344 --DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL------VEDSNLQAP 395
             +         W+     +  +  +G    I  ++ D  + RLL              P
Sbjct: 315 DEESRVGGGHFSWAVDEKWLVGSIGNG----IYEVQVDSGERRLLCVPNTQHSARAESEP 370

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             SP G  + ++    GD  + +         + L + P    
Sbjct: 371 ESSPDGTKVAYNSTMLGDCDAYIAV-------QKLPDPPRNVR 406


>gi|157369550|ref|YP_001477539.1| 6-phosphogluconolactonase [Serratia proteamaculans 568]
 gi|167017122|sp|A8GBC1|6PGL_SERP5 RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|157321314|gb|ABV40411.1| 6-phosphogluconolactonase [Serratia proteamaculans 568]
          Length = 331

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/334 (14%), Positives = 110/334 (32%), Gaps = 38/334 (11%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  +W + D   +   +   +P   + +A      I+   T            VS  + +
Sbjct: 14  QIHVWQLSDAGALELLQTVEAPGQVQPMA------IHPDRTHLYVGVRPAFGIVSYRIEA 67

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                   +    G+     T  + + LF   +S      + +    + ++   +     
Sbjct: 68  DGTLQQAGMAPLPGSPTHISTDLQGRYLFSASYS--GNCASVSPIGHDGVVVAPIQQIDG 125

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-----NATERLTNTL 301
                 +    S  + P      +  L+   K++ + ++++DLQ            T + 
Sbjct: 126 ------LTAPHSANIDPT----NQLLLVPCLKEDRIRLFNLDLQGELTPHTQEAVTTASG 175

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--------QDKEASYFDPV 353
                 ++  +       ++ +G   ++ +  NG     +          +      D  
Sbjct: 176 AGPRHMAFHHNDKYAYCVNELDGTVDVFAISENGGKYTLVQTLDIMPADFNGTRWAADIH 235

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPS--GRSLIFSRKK 410
            +P G  +  +  +     I  + +DGS   ++      + P  ++    GR +I S +K
Sbjct: 236 ITPNGRFLYTSDRTASILTIFSVSEDGSTLSVVGYHPTEEQPRGFNIDHSGRFVISSGQK 295

Query: 411 DGDTGSKLYSID-LNGRNETLINTPAYASDPQWV 443
            G  G  +Y ID  +G+  TL   P     P WV
Sbjct: 296 SGHIG--VYEIDQASGKLTTLARYPVGKG-PMWV 326


>gi|15224356|ref|NP_181905.1| transducin family protein / WD-40 repeat family protein
           [Arabidopsis thaliana]
 gi|2281093|gb|AAB64029.1| putative splicing factor [Arabidopsis thaliana]
 gi|20260566|gb|AAM13181.1| putative splicing factor [Arabidopsis thaliana]
 gi|31711822|gb|AAP68267.1| At2g43770 [Arabidopsis thaliana]
 gi|330255228|gb|AEC10322.1| Prp8 binding protein [Arabidopsis thaliana]
          Length = 343

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 84/260 (32%), Gaps = 25/260 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S   +  L  +  D  N   +       + +  ++ +  ++  A+ D      V   D 
Sbjct: 71  GSHDREIFLWRVHGDCKN-FMVLKGHKNAILDLHWTSDGSQIVSASPDK----TVRAWDV 125

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  K++    S + +   +  G   +IS   D    ++  D++     +     +  
Sbjct: 126 ETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLW--DMRQRGAIQTFPDKYQI 183

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + S+S D++  +F    +    + V      +     +  + +      SP G  +  T
Sbjct: 184 TAVSFS-DAADKIFTGGVD--NDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLL-T 239

Query: 365 KFSGEKFAIGVMKKDGSQER--LLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGS 416
                K  +  M+    Q R   + E             +WSP G  +       G +  
Sbjct: 240 NGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKV-----TAGSSDR 294

Query: 417 KLYSIDLNGRNETLINTPAY 436
            ++  D   R  T+   P +
Sbjct: 295 MVHIWDTTSR-RTIYKLPGH 313


>gi|325518577|gb|EGC98246.1| 6-phosphogluconolactonase [Burkholderia sp. TJI49]
          Length = 415

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 66/217 (30%), Gaps = 45/217 (20%)

Query: 264 RFSSNGKRAL---ISVQKDEAMDIYSVDLQSNATE---RLT------------NTLFINI 305
             S +GK  +    SV  D         + S        LT                   
Sbjct: 150 ALSPDGKYLVTANYSVAADPGGSFAVFPIGSGGAVGPAVLTVHHEGTGPVKGRQDGAHVH 209

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---------VWSP 356
           S  +SPD   + F  D  G +++Y  +      + +    +  Y            V+S 
Sbjct: 210 STVFSPDGRYL-FVQD-LGTDKIYGYRYTVDGSRGLVSPTDTRYTPVKAGSGPRHMVFSA 267

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-----------SPSGRSLI 405
            G     T        +     DG      VE   + AP +           SP GR L 
Sbjct: 268 DGRFAYVTSELNASVEVFGYH-DGKLT--PVETVPMTAPGFKGKVGGGAIHLSPDGRFL- 323

Query: 406 FSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQ 441
           ++  +       +Y+++  +GR +T+    +    P+
Sbjct: 324 YASNRGDANDIVIYAVNRADGRLKTVGRQSSLGRTPR 360



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/329 (13%), Positives = 95/329 (28%), Gaps = 30/329 (9%)

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ-IIGKKFFSSPASWRKIAHTISDDI 162
           ++ G   L+ G     G D + V +R +D K      +      +P+         +   
Sbjct: 47  SADGVYNLLVGTYTGGGSDGIYV-YR-FDTKTGSVAPVSSAKTVNPSYLLPSRDGQTVYA 104

Query: 163 YQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQ-----ILFE 216
              + G+ G    R    +            +  +  +G +  YL  S D        + 
Sbjct: 105 VNELPGDNGPATQRGGISAFRFDARTGALTFIDRVSSEGNDPCYLALSPDGKYLVTANYS 164

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
               P      +       +    L        P +     + + +  FS +G+   +  
Sbjct: 165 VAADPGGSFAVFPIGSGGAVGPAVLTVHHEGTGPVKGRQDGAHVHSTVFSPDGRYLFVQD 224

Query: 277 QKDEAMDIYSVDLQS-NATERLTNTLFINISA-------SYSPDSSQIVFESDREGKEQL 328
              + +  Y   +         T+T +  + A        +S D       S+     ++
Sbjct: 225 LGTDKIYGYRYTVDGSRGLVSPTDTRYTPVKAGSGPRHMVFSADGRFAYVTSELNASVEV 284

Query: 329 Y------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI---GVMKKD 379
           +      +               +        SP G  + +    G+   I    V + D
Sbjct: 285 FGYHDGKLTPVETVPMTAPGFKGKVGGGAIHLSPDGRFL-YASNRGDANDIVIYAVNRAD 343

Query: 380 GSQERLLVEDSNLQAPT---WSPSGRSLI 405
           G  + +  + S  + P      P+G+ LI
Sbjct: 344 GRLKTVGRQSSLGRTPREFLIDPTGKWLI 372



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 79/244 (32%), Gaps = 40/244 (16%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-FSP 221
           Y       G F      V      G +  ++  +  +G     +   +D        FSP
Sbjct: 163 YSVAADPGGSFA-----VFPIGSGGAVGPAVLTVHHEGTGP--VKGRQDGAHVHSTVFSP 215

Query: 222 NQQKVA---------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           + + +          Y      D  R  +  T     P + G+    ++   FS++G+ A
Sbjct: 216 DGRYLFVQDLGTDKIYGYRYTVDGSRGLVSPTDTRYTPVKAGSGPRHMV---FSADGRFA 272

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-----------SPDSSQIVFESD 321
            ++ + + +++++           +        +  +           SPD  + ++ S+
Sbjct: 273 YVTSELNASVEVFGY--HDGKLTPVETVP--MTAPGFKGKVGGGAIHLSPDG-RFLYASN 327

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           R     + +   N +D +  +  +++S      + +  P G  +       + F +    
Sbjct: 328 RGDANDIVIYAVNRADGRLKTVGRQSSLGRTPREFLIDPTGKWLIVGNQDSDTFYVFSRD 387

Query: 378 KDGS 381
            D  
Sbjct: 388 VDTG 391


>gi|198433744|ref|XP_002131768.1| PREDICTED: similar to notchless homolog 1 [Ciona intestinalis]
          Length = 487

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 61/191 (31%), Gaps = 20/191 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + +   +FSPN   +A  + D      V   D   +       + R  +L   +S +
Sbjct: 114 GHAEAVLSVKFSPNGGYLASGSGDT----TVRFWDLSTETPHYTCKSHRHWVLCIEWSPD 169

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP---DS--SQIVFESD 321
           G+    S  K+  + ++  D +S     + LT          ++P   D    ++   S 
Sbjct: 170 GRTLA-SGCKNGQVCLW--DPKSGKQIGKTLTGHKQWITHLCWAPLHLDGTCRKLASSSK 226

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 + +  +N      I      S     WS  G+ + ++        +     DG 
Sbjct: 227 ---DTTIRIWDTNTCQCSIILSSHLQSVTCIRWS--GEDLIYSASQDRTIKVWRPN-DGV 280

Query: 382 QERLLVEDSNL 392
             R L    + 
Sbjct: 281 LCRTLQGHGHW 291



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 60/155 (38%), Gaps = 17/155 (10%)

Query: 182 ESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    +L + +                ++ + +FSP+ + +A A++D      + 
Sbjct: 344 ERMVSGSDDFTLFLWNPSTEKKPIARMTGHQALVNDVKFSPDARLIASASFDK----SIK 399

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L + +  +    +    + +    +S++  R L+S   D  + ++     ++  + L + 
Sbjct: 400 LWNAKSGKFIVSLRGHVNSVYQLAWSAD-SRLLVSGSGDSTLKVW----DTHKNKLLLDL 454

Query: 301 LFINIS---ASYSPDSSQIVFESDREGKEQLYVMQ 332
                      +S D  ++       GK+++  + 
Sbjct: 455 PGHADEVYAVDWSTDGQRVA----SGGKDRVLKIW 485



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 16/156 (10%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+R + S   D  + +++   +     R+T    +     +SPD+  I   S     + +
Sbjct: 343 GERMV-SGSDDFTLFLWNPSTEKKPIARMTGHQALVNDVKFSPDARLIASASF---DKSI 398

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +  +         +    S +   WS    L+  +        +     D  + +LL++
Sbjct: 399 KLWNAKSGKFIVSLRGHVNSVYQLAWSADSRLLV-SGSGDSTLKVW----DTHKNKLLLD 453

Query: 389 DSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                    A  WS  G+ +        D   K++ 
Sbjct: 454 LPGHADEVYAVDWSTDGQRVA---SGGKDRVLKIWR 486


>gi|168009638|ref|XP_001757512.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691206|gb|EDQ77569.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 475

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 61/155 (39%), Gaps = 13/155 (8%)

Query: 182 ESVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    ++ + +   +   +       Q++    FSP+ + +A A++D      V 
Sbjct: 332 ERLVSGSDDFTMFLWEPGTSKQPKARMTGHQQLVNHVYFSPDGRWIASASFDK----SVK 387

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L D    +           +    +S++  R L+S  KD  M ++  D+++         
Sbjct: 388 LWDGYTGKFLATFRGHVGPVYQISWSAD-SRLLVSGSKDSTMKMW--DMRTQKLREDLPG 444

Query: 301 LFINISAS-YSPDSSQIVFESDREGKEQLYVMQSN 334
               + A  +S D  ++       G++++  +  +
Sbjct: 445 HADEVFAVDWSADGEKVA----SGGRDRVLKLWMS 475



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 45/126 (35%), Gaps = 9/126 (7%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P   + +   +FSP+  K+A  + D      V   D             ++ +L   +S 
Sbjct: 107 PGHSEAVLSVQFSPDSTKLASGSGDT----TVRFWDIYTQTPLFTCTGHKNWVLCIAWSP 162

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP----DSSQIVFESDRE 323
           +GK  L S  KD  + ++            T       + ++ P      S+    + ++
Sbjct: 163 DGKMLL-SGSKDGELRLWEPTTGKAIGNPFTGHKKWITAVAWEPAHLQSPSRRFASASKD 221

Query: 324 GKEQLY 329
           G  +++
Sbjct: 222 GDIRIW 227



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 44/305 (14%), Positives = 88/305 (28%), Gaps = 53/305 (17%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + SG    ++   D       +        +    +SP+ + +   +   +D     
Sbjct: 122 STKLASGSGDTTVRFWDIYTQTPLFTCTGHKNWVLCIAWSPDGKMLLSGS---KDGELRL 178

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQ---- 290
              T            +  I A  +      S    R   S  KD  + I+   L     
Sbjct: 179 WEPTTGKAIGNPFTGHKKWITAVAWEPAHLQSP--SRRFASASKDGDIRIWDTTLHKTVM 236

Query: 291 --SNATERLTNTLFINISASY--SPDSSQIVFESD-----REGKEQLYVMQSNGSDQKRI 341
             S  T  +T   +      Y  S D +  V+E+      RE K   + + +     + +
Sbjct: 237 CLSGHTLAVTCVKWSGEGFIYSSSQDCTIKVWETTQGKLIRELKGHGHWVNTLALSTEYV 296

Query: 342 SQDKEASYFDPVWSP--QGDLIAFTKF-------------SGEKFAIGVMKKDGSQE--- 383
            +     +    ++   Q    A  ++               + F + + +   S++   
Sbjct: 297 LRTGAFDHTGKQYNSAEQMKEAALVRYKAAKGESQERLVSGSDDFTMFLWEPGTSKQPKA 356

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP--- 440
           R+      +    +SP GR +        D   KL+    +G     + T      P   
Sbjct: 357 RMTGHQQLVNHVYFSPDGRWIA---SASFDKSVKLW----DGYTGKFLATFRGHVGPVYQ 409

Query: 441 -QWVG 444
             W  
Sbjct: 410 ISWSA 414



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 45/149 (30%), Gaps = 9/149 (6%)

Query: 273 LISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           L+S   D  M ++     S   + R+T    +     +SPD   I   S     + + + 
Sbjct: 334 LVSGSDDFTMFLWE-PGTSKQPKARMTGHQQLVNHVYFSPDGRWIASASF---DKSVKLW 389

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                      +      +   WS    L+  +        +  M+    +E L      
Sbjct: 390 DGYTGKFLATFRGHVGPVYQISWSADSRLLV-SGSKDSTMKMWDMRTQKLREDLPGHADE 448

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + A  WS  G  +        D   KL+ 
Sbjct: 449 VFAVDWSADGEKVA---SGGRDRVLKLWM 474


>gi|120403325|ref|YP_953154.1| hypothetical protein Mvan_2334 [Mycobacterium vanbaalenii PYR-1]
 gi|119956143|gb|ABM13148.1| hypothetical protein Mvan_2334 [Mycobacterium vanbaalenii PYR-1]
          Length = 634

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 349 YFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIF 406
           Y    W   G L+ + T  +G  + I +M     + R L  D +  ++   +P G+++ F
Sbjct: 242 YEGASWHAGGRLLKYQTTTTGLNYDIYLMDTATGERRQLTTDLDYNESGDVAPDGKTVYF 301

Query: 407 SRKKDGDT 414
           S  +  D 
Sbjct: 302 SSARGLDR 309



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 1/63 (1%)

Query: 262 APRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
              + + G+             DIY +D  +    +LT  L  N S   +PD   + F S
Sbjct: 244 GASWHAGGRLLKYQTTTTGLNYDIYLMDTATGERRQLTTDLDYNESGDVAPDGKTVYFSS 303

Query: 321 DRE 323
            R 
Sbjct: 304 ARG 306



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/147 (13%), Positives = 54/147 (36%), Gaps = 26/147 (17%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + V +      +  R+ +           +   R  + +P++S   K++  +  ++ AM
Sbjct: 185 GEYVTWNEVSAIEGTRMSIAALGTAGDGYELTGQR--VFSPQWS---KKSDYATDRENAM 239

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRI 341
             Y                     AS+      + +++   G    +Y+M +   +++++
Sbjct: 240 RFYE-------------------GASWHAGGRLLKYQTTTTGLNYDIYLMDTATGERRQL 280

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + D + +    V +P G  + F+   G
Sbjct: 281 TTDLDYNESGDV-APDGKTVYFSSARG 306



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 46/156 (29%), Gaps = 17/156 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +    + + Y T        +YLMDT      +++        +   + +GK    S  
Sbjct: 246 SWHAGGRLLKYQTTTTGLNYDIYLMDTATGE-RRQLTTDLDYNESGDVAPDGKTVYFSSA 304

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS---- 333
           +     +  +D+ +           +  S ++       ++ + R    + ++M      
Sbjct: 305 RG----LDRMDVFTALER-----PSLIDSGAFGQIGRVGLWNNRRC-MNEPWLMNMAVGQ 354

Query: 334 --NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
              G   + +  D   +     W P        +  
Sbjct: 355 IRGGYSGQPLVIDPAWTLRGWSWFPDSTRAVVNEQQ 390


>gi|170760360|ref|YP_001787103.1| hypothetical protein CLK_1163 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169407349|gb|ACA55760.1| hypothetical protein CLK_1163 [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 1485

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 22/144 (15%)

Query: 304 NISASYSPDSSQI------VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           N + + S + S        V+  +   K  LY     G    +IS DK            
Sbjct: 345 NTAGNISNNGSAAMDLDFYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINVI----- 399

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           GD I ++ ++     I  MKKDG+++++L +D+         SG  + ++ + D     +
Sbjct: 400 GDWIYYSNYNDNG-KIYKMKKDGTKKQILCDDTATYITV---SGGVVYYANQSD---KGR 452

Query: 418 LYSIDLNGRNETLINTPAYASDPQ 441
           LY I+ +G     I+  A+  DP 
Sbjct: 453 LYKINTDGT----IDGGAFNRDPA 472



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 71/222 (31%), Gaps = 41/222 (18%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y  Y +          T   R   +I   ++  +       G     S   ++   IY 
Sbjct: 362 FYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINV----IGDWIYYS-NYNDNGKIYK 416

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +       + L      + +A+Y   S  +V+ +++  K +LY + ++G      + D  
Sbjct: 417 MKKDGTKKQIL-----CDDTATYITVSGGVVYYANQSDKGRLYKINTDG------TIDGG 465

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           A   DP               G+   + V+  D        + +N         G  + +
Sbjct: 466 AFNRDPA--------------GKVHGMPVID-DYGNYNKATDQANFINVV----GDWIYY 506

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT---PAYASDPQWVGF 445
           S   DG    K+Y+++ +G     +N            W  +
Sbjct: 507 SNFSDGH---KIYTVNKDGNIRRKVNDEWADGIQIVGAWAYY 545


>gi|153807373|ref|ZP_01960041.1| hypothetical protein BACCAC_01651 [Bacteroides caccae ATCC 43185]
 gi|149129735|gb|EDM20947.1| hypothetical protein BACCAC_01651 [Bacteroides caccae ATCC 43185]
          Length = 750

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 60/147 (40%), Gaps = 26/147 (17%)

Query: 268 NGKRALISVQKDEAMD-IYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIV-----F 318
           +G RA+ +    +    ++ V L +   ++L +    ++     +Y PD   I      +
Sbjct: 236 DGDRAMFTQTMSDNRWNVFEVKLNNGDCKKLIDNPEPDLEFYDGTYLPDGRIIANSNIGY 295

Query: 319 E-------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +       SD  G   LY       + +R++ D++A++ +PV    G  + +T++     
Sbjct: 296 QGVPCVNGSDPVGNMVLYT--PQSKNLRRLTFDQDANW-NPVIMNNGR-VMYTRWEYTDL 351

Query: 372 AIGV------MKKDGSQERLLVEDSNL 392
                     M  DG++++ L    ++
Sbjct: 352 THYYTRIVMNMNPDGTEQKALYGSGSM 378


>gi|170741289|ref|YP_001769944.1| cytochrome c class I [Methylobacterium sp. 4-46]
 gi|168195563|gb|ACA17510.1| cytochrome c class I [Methylobacterium sp. 4-46]
          Length = 429

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 55/157 (35%), Gaps = 11/157 (7%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      + A   S +G R  IS   D++  ++++D +  A   L        +A+  PD
Sbjct: 23  LRGHGGPVRALAVSPDG-RVAISGSFDQSAILWAID-EGAALAVLRFHDGAVNAAAALPD 80

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                     +G+  L+ +    ++   +  D          SP G  +A   + G    
Sbjct: 81  GRMA--TGGEDGRVALWRL--GSAEPVAVFADHAGPIAGLAVSPDGARLASASWDGTARI 136

Query: 373 IGVMKKDG----SQERLLVE-DSNLQAPTWSPSGRSL 404
             +   DG       R+  E   N+    + P GR +
Sbjct: 137 RPLPGADGPAPDRPGRVASEHRGNVNGVAFLPDGRLV 173



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 61/225 (27%), Gaps = 23/225 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    S  +   D      +    D  +      P+ +          +  RV L    
Sbjct: 44  SGSFDQSAILWAIDEGAALAVLRFHDGAVNAAAALPDGRMAT-----GGEDGRVALWRLG 98

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-----ERLTNT 300
                    +    I     S +G R   S   D    I  +               +  
Sbjct: 99  SAEPVAVFADHAGPIAGLAVSPDGARLA-SASWDGTARIRPLPGADGPAPDRPGRVASEH 157

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                  ++ PD   +    D      L V+  +G     ++            +P G++
Sbjct: 158 RGNVNGVAFLPDGRLVTVGYDAA----LRVVPEDG---PALTVTLPTPLNAVATAPDGEI 210

Query: 361 IAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSL 404
            A    +G    + ++  DG +   + +    + A   SP G  +
Sbjct: 211 AA----AGADGTVRLLGPDGRERAAVAIPPRPVIALAVSPDGGRI 251


>gi|149238812|ref|XP_001525282.1| hypothetical protein LELG_03210 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146450775|gb|EDK45031.1| hypothetical protein LELG_03210 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 390

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 74/244 (30%), Gaps = 39/244 (15%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               D+ +     SP+  ++   + D      V+       +    +          R+S
Sbjct: 55  LRDHDKTVTSVDISPDGSRILTCSQD--RNALVWEYRDGEFKPTLVLLRINRAATVCRWS 112

Query: 267 SNGKR---------ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY------SP 311
            +G++           +   ++E     S  L+      +T    ++   +       S 
Sbjct: 113 PDGQKFAVGSSDRIIAVCYYEEENDWWISKHLKKPIKSTITT---LDWHPNGVLLACGST 169

Query: 312 DSSQIVFESDREG---KEQLYVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDLIAFTK 365
           D    VF    +G   K +  V  S    Q      + +  A      +SP G+ +A+  
Sbjct: 170 DGHVRVFSGYIKGIDAKPEPSVWGSKLPFQTLCGDFTNETLAWIHGVKFSPDGNALAWVS 229

Query: 366 FSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKLYS 420
                  IGV+  DG     R ++       P      +S++++       G     L  
Sbjct: 230 HDSS---IGVVYPDGEGLPPRSILNVKTDYLPF-----KSIVWTSDDSVVVGGFNCNLVV 281

Query: 421 IDLN 424
              N
Sbjct: 282 FKGN 285


>gi|67521658|ref|XP_658890.1| hypothetical protein AN1286.2 [Aspergillus nidulans FGSC A4]
 gi|74681414|sp|Q5BDU4|HIR1_EMENI RecName: Full=Protein hir1
 gi|40746723|gb|EAA65879.1| hypothetical protein AN1286.2 [Aspergillus nidulans FGSC A4]
          Length = 985

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 80/230 (34%), Gaps = 39/230 (16%)

Query: 220 SPNQQKVAYATYDDEDILRVY----LMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRA 272
           SP+  ++  A  D    +R++    +        PK++    N    I   RFS NGK  
Sbjct: 47  SPDGSRLVTAAGD--GYVRIWSTEAICGAEDANKPKQLASMSNHSGTIHTVRFSPNGKYL 104

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS---------QIVFESDRE 323
             S   D+ + IY++D          N      S  +S DSS         ++V  S   
Sbjct: 105 A-SGADDKIVCIYTLDA---------NPPSHAASFGWSCDSSILVSVGLDSKVVVWSGHT 154

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E+L  +  + S  K I+ D    YF    S    +  F   S    +    + +    
Sbjct: 155 -FEKLKTLSVHQSHVKGITFDPANKYFATA-SDDRTVRIFRFTSPAPNSTAHDQMNNFVL 212

Query: 384 RLLVEDSNLQAP--------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              +      +P        +WSP G  +  +   +G   S +  I+  G
Sbjct: 213 EQTITAPFQNSPLTAYFRRCSWSPDGLHIAAANAVNGP-VSSVAIINRGG 261



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 11/181 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             +    +   RFSPN + +A  +  D+ I+ +Y +D          G      +     
Sbjct: 85  MSNHSGTIHTVRFSPNGKYLA--SGADDKIVCIYTLDANPPSHAASFGWSCDSSILVSVG 142

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FES---D 321
            + K  ++         + ++ +  +  + +T        A+ S D +  +  F S   +
Sbjct: 143 LDSK--VVVWSGHTFEKLKTLSVHQSHVKGITFDPANKYFATASDDRTVRIFRFTSPAPN 200

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTK-FSGEKFAIGVMKKD 379
               +Q+       +           +YF    WSP G  IA     +G   ++ ++ + 
Sbjct: 201 STAHDQMNNFVLEQTITAPFQNSPLTAYFRRCSWSPDGLHIAAANAVNGPVSSVAIINRG 260

Query: 380 G 380
           G
Sbjct: 261 G 261


>gi|50556994|ref|XP_505905.1| YALI0F26389p [Yarrowia lipolytica]
 gi|49651775|emb|CAG78717.1| YALI0F26389p [Yarrowia lipolytica]
          Length = 367

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 10/141 (7%)

Query: 288 DLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           DL S    +LT         +A  SP+  QI   S       + +  +   D  +  +  
Sbjct: 19  DLASEFPTKLTIDAHSAPCTTAKISPNGKQIATCS---ADASIKLWDAATGDLIQTLRGH 75

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            A   D  WSP   ++A T        I    +  SQ  L+     +    ++  G  ++
Sbjct: 76  RAGINDISWSPDSKMLA-TASDDRTIRIWSTHRPSSQRILVGHTHYVTCVKFNYKGNLVV 134

Query: 406 FSRKKDGDTGSKLYSIDLNGR 426
                  D   +++ + L GR
Sbjct: 135 ---SGSADENVRVWDV-LQGR 151



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 85/241 (35%), Gaps = 16/241 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           S+ + D    ++          + +  +SP+ + +A A+ D      + +  T    + +
Sbjct: 57  SIKLWDAATGDLIQTLRGHRAGINDISWSPDSKMLATASDDR----TIRIWSTHRPSSQR 112

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +      +   +F+  G   ++S   DE + ++ V LQ      L        +  +S 
Sbjct: 113 ILVGHTHYVTCVKFNYKGN-LVVSGSADENVRVWDV-LQGRCIMTLAAHSQPISAVDFSC 170

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           + + IV  S  +G  +++   + G   K I  ++ +      ++P    I  +       
Sbjct: 171 EGTMIVSGSH-DGLIRMWDT-ATGQCLKTIVGEESSPIMFARFTPNSKFILVSNMDSTAR 228

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               M     +     E+     PT   +    R+++    +DG     +Y  D+  R  
Sbjct: 229 LWDYMNNKVVKTYKGHENGKYCCPTGFVYRQD-RAVLLHASEDGR----VYVYDIQDRTV 283

Query: 429 T 429
            
Sbjct: 284 R 284


>gi|325926450|ref|ZP_08187772.1| YVTN family beta-propeller repeat protein [Xanthomonas perforans
           91-118]
 gi|325543169|gb|EGD14610.1| YVTN family beta-propeller repeat protein [Xanthomonas perforans
           91-118]
          Length = 338

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 52/130 (40%), Gaps = 10/130 (7%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  Q       EG+ Q+ ++ +     +++   +  +     ++P G  +  +     
Sbjct: 126 SPDGKQFAVCV--EGQNQVTLIDAAQFVVQQVIATRGQAPEHCAYTPDGKWLLTSNEGSN 183

Query: 370 KFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                +++    + R ++    + +   ++P G S+  ++    +T + +  IDL  R +
Sbjct: 184 DMD--MIELATHRSRGVVATSGHPRGMAFAPDGHSVYIAQ----ETANVVDVIDLQTR-Q 236

Query: 429 TLINTPAYAS 438
              + PA   
Sbjct: 237 RRASLPAGVR 246



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 76/199 (38%), Gaps = 15/199 (7%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +N + ++D     ++ +  +R Q      ++P+ + +  +     D+  + L   R   
Sbjct: 138 GQNQVTLIDAAQFVVQQVIATRGQAPEHCAYTPDGKWLLTSNEGSNDMDMIELATHRSRG 197

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
                G+ R M     F+ +G    I+  ++ A  +  +DLQ+    R +    +  +  
Sbjct: 198 VVATSGHPRGM----AFAPDGHSVYIA--QETANVVDVIDLQTRQ-RRASLPAGVRTAGV 250

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + S D +++ + S+  G   + V+    +         +  + +P  +P GD +      
Sbjct: 251 ALSGDGARL-YASN-GGAGTVSVIDLKTARTLAEIPVGQRPW-NPALTPAGDKLYVANGR 307

Query: 368 GEKFAIGVMKKDGSQERLL 386
               ++     D +  R L
Sbjct: 308 SNSVSV----IDTASLREL 322



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 51/157 (32%), Gaps = 10/157 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDR 322
             S +GK+  + V+      +  +D      +++  T        +Y+PD   ++  S+ 
Sbjct: 124 ALSPDGKQFAVCVE--GQNQVTLIDAAQFVVQQVIATRGQAPEHCAYTPDGKWLL-TSNE 180

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              +   +  +    +  ++           ++P G  +   + +     + V+     Q
Sbjct: 181 GSNDMDMIELATHRSRGVVATSGHP--RGMAFAPDGHSVYIAQETAN--VVDVIDLQTRQ 236

Query: 383 ERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            R  L           S  G  L ++      T S +
Sbjct: 237 RRASLPAGVRTAGVALSGDGARL-YASNGGAGTVSVI 272


>gi|154148551|ref|YP_001407028.1| outer membrane lipoprotein [Campylobacter hominis ATCC BAA-381]
 gi|153804560|gb|ABS51567.1| outer membrane lipoprotein [Campylobacter hominis ATCC BAA-381]
          Length = 219

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 19/127 (14%)

Query: 11  LNMKINLCLLL-VLIGGFFPTSIHAFVKVATNSANY----SPVSIAFTKFV--------- 56
           +  KI L +L+  L+GG       A    A  SA        +S++  +F          
Sbjct: 1   MKFKIFLLVLITALLGGCASEKSRAVQTEAVKSAQIPYSGVKMSVSVGRFSNQSSYNNGI 60

Query: 57  ---SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVT 113
                D LG +   ++  +LQ+S  F+++ + +   +    ++    +  N  GA  +VT
Sbjct: 61  FSDGEDRLGNQAQTILISNLQQSGRFSVMDRTNM--RALREEATISKKAQNLKGANYVVT 118

Query: 114 GRVIKEG 120
           G +++ G
Sbjct: 119 GDIVEFG 125


>gi|329299041|ref|NP_001178407.1| transcription initiation factor TFIID subunit 5 [Bos taurus]
 gi|297490934|ref|XP_002698507.1| PREDICTED: TAF5 RNA polymerase II, TATA box binding protein
           (TBP)-associated factor, 100kDa [Bos taurus]
 gi|296472802|gb|DAA14917.1| TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated
           factor, 100kDa [Bos taurus]
          Length = 800

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 472 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQAADLSLIDKESDDVLERIMDEK 531

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 587

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 588 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 644

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 645 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 699

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILA 727



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 585 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 696

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 697 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 738


>gi|7022502|dbj|BAA91621.1| unnamed protein product [Homo sapiens]
 gi|15082335|gb|AAH12075.1| Notchless homolog 1 (Drosophila) [Homo sapiens]
          Length = 485

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 158

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEA------SYFDPVWS 355
            +S S+SPD  ++       G    Q+ +   +   Q   +    +      S+     +
Sbjct: 159 VLSISWSPDGKKLA-----SGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHAN 213

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + +     G  ER+L     ++    W   G  L++S  +D
Sbjct: 214 PECRYVASSSKDGS---VRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 266



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 396

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 455

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 456 ADEVYAVDWSPDGQRVA 472



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 131 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA---SGCKNGQILLWDPST 187

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ I+           LT  
Sbjct: 188 GKQVGRTLAGHSKWITGLSWEPLHANPECRYVA-SSSKDGSVRIWDT-TAGRCERILTGH 245

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 246 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 302 RTGAFEPAEASVNPQDLQGSLQELKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 358

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 359 AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 396

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 397 KLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAM 450

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 451 DLPGHADEVYAVDWSPDGQRVA 472


>gi|322826213|gb|EFZ30942.1| notchless-like protein, putative [Trypanosoma cruzi]
          Length = 548

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 71/227 (31%), Gaps = 27/227 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ--QKVAYATYDDEDILRVYLMD 243
           S     ++ V D      R++       +     S +   +  A+   + +   R  + +
Sbjct: 329 SSSQDRTVIVWDASNGTPRHILRGHAHWVNFVALSTDLVIRTGAFDHEEKKFDSREEMQE 388

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               R  + +  F                LIS   D  M +++   Q+    RLT     
Sbjct: 389 YAERRYQEVVTRFGYHER-----------LISCSDDNTMFLWAPQEQTTPLGRLTGHQGA 437

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                +SPD + I   S     + + +  +         +   A  +   WS    L+  
Sbjct: 438 VFHIQFSPDGTLIASCS---ADKSVKLWNAADGKFITTFRGHVAPVYHVSWSLDSRLLV- 493

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVED--SNLQ---APTWSPSGRSLI 405
           +        +  + K     R LVED   +     +  WSP G+ + 
Sbjct: 494 SGGRDSTLKLWSVSK-----RELVEDLAGHCDEIFSTDWSPDGQRVA 535



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/195 (13%), Positives = 57/195 (29%), Gaps = 20/195 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +    FSP+ + +A           + + D       + +    S +    ++
Sbjct: 176 LEGHSEAVLVVTFSPDGEALA----SGGGDKEIRIWDVYTLTPTEELKAHTSWVQVLSWA 231

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP-----DSSQIVFE 319
            +GK  + S  KD  + I+S D        +R           S+ P     D ++ V  
Sbjct: 232 PDGKHLV-SGSKDGTIIIWSHDGMYGNFKGKRHNAHSSYLSHISWEPLHRNIDCNRFVSA 290

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S    K+    +  N +  +      +A      W   G+   ++        +      
Sbjct: 291 S----KDTTLKVWHNVTGVQFSLSGHQACVTCVKW--GGEGFIYSSSQDRTVIVW--DAS 342

Query: 380 GSQERLLVEDSNLQA 394
               R ++       
Sbjct: 343 NGTPRHILRGHAHWV 357



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 59/353 (16%), Positives = 110/353 (31%), Gaps = 44/353 (12%)

Query: 109 QVLVT--GRVIKEGKDRLRVEFRLWD---VKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
             +VT  G V +       V  RL D   V    Q++     ++P           D++ 
Sbjct: 37  DTVVTEAGAVDEIEAKDKNVMVRLVDEKGVLTGAQLL-LPVTATPKQL--------DELL 87

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
            S+  E         F+    V   +++SL    ++    + +   R           + 
Sbjct: 88  CSMLDESARGTPFAFFIDGDQVHDSVRDSLFRRQQEAFVDKMIKEGRRFRQQ------DV 141

Query: 224 QKVAY-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            K+ +        D +   +       + R    +      +L   FS +G+        
Sbjct: 142 SKLEFELPEETVVDIQFKPQAKFRVRPVTRCTGALEGHSEAVLVVTFSPDGEALA---SG 198

Query: 279 DEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               +I   D+ +   TE L          S++PD   +V  S ++G   ++       +
Sbjct: 199 GGDKEIRIWDVYTLTPTEELKAHTSWVQVLSWAPDGKHLVSGS-KDGTIIIWSHDGMYGN 257

Query: 338 QKRISQDKEASYFDP-VWSPQGDLIA---FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            K    +  +SY     W P    I    F   S +          G Q  L    + + 
Sbjct: 258 FKGKRHNAHSSYLSHISWEPLHRNIDCNRFVSASKDTTLKVWHNVTGVQFSLSGHQACVT 317

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
              W   G   I+S  +  D    ++    NG    ++   A+     WV F+
Sbjct: 318 CVKWG--GEGFIYSSSQ--DRTVIVWDAS-NGTPRHILRGHAH-----WVNFV 360


>gi|156084690|ref|XP_001609828.1| receptor for activated C kinase, RACK protein [Babesia bovis]
 gi|154797080|gb|EDO06260.1| receptor for activated C kinase, RACK protein [Babesia bovis]
          Length = 322

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 15/178 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +  + +  +   RFSPN  +  + +   + I++V+  D         +     ++   
Sbjct: 145 RTVQNAHNDWVSCVRFSPNPHEHVFVSGGWDKIVKVW--DLANCNLKFNLSGHEGIVSCT 202

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S +G     S  KD    ++ +  + N+   L     IN    +SP +  +   +DR 
Sbjct: 203 SISPDGSLCA-SGGKDGIARLWDM-KEGNSLHLLEAGSPINA-LCFSPCNYWLCVATDRA 259

Query: 324 GKEQLYVMQSNGSDQ-KRISQDKEASYFDP-----VWSPQGDLIAFTKFSGEKFAIGV 375
               + +      +    I+ DK      P      W+  G  +      G  +   V
Sbjct: 260 ----IKIWNLENKNVLAEITSDKPKKIGLPWCVSLCWNADGSTLFAGSTDGTIYVYQV 313



 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/212 (17%), Positives = 75/212 (35%), Gaps = 17/212 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +       Q + +   S +       ++D+     + L D    +         S + +
Sbjct: 60  AKKSLTGHSQTIQDVTMSFDGLFALSGSWDN----TLRLWDLVKCKTVHVYNGHTSDVYS 115

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFE 319
             FS + ++  IS  +D+ + ++     + +  + T     N   S   +SP+  + VF 
Sbjct: 116 VDFSPDNRQI-ISASRDKTIKLW----NTLSECKRTVQNAHNDWVSCVRFSPNPHEHVFV 170

Query: 320 SDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           S   G +++  V      + K      E        SP G L A +        +  MK 
Sbjct: 171 S--GGWDKIVKVWDLANCNLKFNLSGHEGIVSCTSISPDGSLCA-SGGKDGIARLWDMK- 226

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           +G+   LL   S + A  +SP    L  +  +
Sbjct: 227 EGNSLHLLEAGSPINALCFSPCNYWLCVATDR 258


>gi|118374526|ref|XP_001020451.1| hypothetical protein TTHERM_01351030 [Tetrahymena thermophila]
 gi|89302218|gb|EAS00206.1| hypothetical protein TTHERM_01351030 [Tetrahymena thermophila SB210]
          Length = 2410

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 68/204 (33%), Gaps = 12/204 (5%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              S N Q +A  + D  +I  +     +++    +I      I    FS + K    + Q
Sbjct: 1814 AVSSNNQYIASCSDDTCNIWSIQNGLWQVN----QIKGHNKNIYEVTFSGDSKYLATTSQ 1869

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                  I++++        L        S  +S DS  +    + +    ++ +      
Sbjct: 1870 Y--TCQIWNIEKDFLLHHTLEGNDNNISSVVFSADSKYLA-TVNSDCLCIIWDVDKRFQL 1926

Query: 338  QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
               I+   +       +S  G  IA        F +  ++ DG +    ++   +    +
Sbjct: 1927 LHSINAHDQKKINSIAFSFDGKQIATCSRDDNTFKVWNIQ-DGIKLIKTIQSQYISLVAF 1985

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSI 421
            SP+G+ L             ++++
Sbjct: 1986 SPNGKYLA----TGKSGNINIWNV 2005



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 66/177 (37%), Gaps = 8/177 (4%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            +      +  +++D   + +     D  +    FS + + +A    D   +  ++ +D R
Sbjct: 1867 TSQYTCQIWNIEKD-FLLHHTLEGNDNNISSVVFSADSKYLATVNSDC--LCIIWDVDKR 1923

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                     + +  I +  FS +GK+     + D    ++++        +   + +I++
Sbjct: 1924 FQLLHSINAHDQKKINSIAFSFDGKQIATCSRDDNTFKVWNIQ-DGIKLIKTIQSQYISL 1982

Query: 306  SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             A +SP+   +   + + G   ++ ++  G +     Q    +    V+S     + 
Sbjct: 1983 VA-FSPNGKYLA--TGKSGNINIWNVE-KGYEFLDTIQAHSDNVGFIVFSANSKYLV 2035


>gi|254390941|ref|ZP_05006151.1| 40-residue YVTN family beta-propeller repeat-containing protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|197704638|gb|EDY50450.1| 40-residue YVTN family beta-propeller repeat-containing protein
           [Streptomyces clavuligerus ATCC 27064]
          Length = 545

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 63/193 (32%), Gaps = 16/193 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  ++ Y +  +   + V    T    A   +    + I     + +G RA +     
Sbjct: 163 SPDGGRL-YVSNGNAGTVSVVDTATGTVIATVPVTGSPNGI---AVTPDGSRAYVVTS-- 216

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
               +  +D  +N    +T T+ +  +    + SPD ++    +  +    + V+ +  +
Sbjct: 217 GNSRLTVIDTAANT---VTTTIAVGSAPQQVAVSPDGARAYVTNYND--RSVSVVDTATN 271

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                + D         ++P     A+         + +     +    +         T
Sbjct: 272 TVTG-TIDVRGFPQGVAFTPDSGR-AYVTRPYSNSVVAINTATNAVSANIPLTDRPYGVT 329

Query: 397 WSPSGRSLIFSRK 409
            SP G  +  SR 
Sbjct: 330 ASPDGTRVYVSRH 342



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 68/217 (31%), Gaps = 11/217 (5%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+  + AY        L V             +G+    +     S +G RA ++   D 
Sbjct: 206 PDGSR-AYVVTSGNSRLTVIDTAANTVTTTIAVGSAPQQV---AVSPDGARAYVTNYNDR 261

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           ++    VD  +N      +        +++PDS +      R     +  + +  +    
Sbjct: 262 SVS--VVDTATNTVTGTIDVRGFPQGVAFTPDSGRAYVT--RPYSNSVVAINTATNAVSA 317

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                +  Y     SP G  +  ++  G   A      +      L  ++  +    +P 
Sbjct: 318 NIPLTDRPYGVTA-SPDGTRVYVSRHWGATVATIATATNTVSATALAGNTPGEV-AVTPD 375

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           G  + ++   +  T S + +         +  TPA  
Sbjct: 376 GGHV-YATNGNSATVSVIDTATGTTNAIPVGVTPADV 411


>gi|194226550|ref|XP_001916558.1| PREDICTED: WD repeat domain 17 [Equus caballus]
          Length = 1323

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/192 (13%), Positives = 69/192 (35%), Gaps = 11/192 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P +   +A AT  +      ++ D 
Sbjct: 411 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGDLNCIAGATSRNG----AFIWDV 466

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R   + ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 467 KKGKMVQRFNEHGKNGIFCIAWSHKDSKRIA-TCSGDGFCIIRTID--GKVLHKY-KHPA 522

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 523 AVFGCDWSQNNKDMIATGCEDKSVRVYYVATSSDQPLKVFSGHTAKVFHVRWSPLREGIL 582

Query: 363 FTKFSGEKFAIG 374
            +        I 
Sbjct: 583 CSGSDDGSVRIW 594


>gi|168704511|ref|ZP_02736788.1| probable serine/threonine protein kinase [Gemmata obscuriglobus UQM
           2246]
          Length = 1182

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 85/301 (28%), Gaps = 52/301 (17%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF---- 215
           D     +         R L           +  L     DG ++      R+  L+    
Sbjct: 526 DAALARVARVNLAAWGRELPKPPRRFRHTEQPRLAAFHPDGKHMVSAGRGRELYLWDLGT 585

Query: 216 -------EPRFSPNQ---QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   P F P     QK  Y T       R+               +      AP  
Sbjct: 586 GARVRTYRPSFDPVGLLPQKPVYWTVGVSPDGRLVAAGGTDGGVTLWEADPSGPAAAPSL 645

Query: 266 S------SN---------------GKRALISVQK-DEAMDIYSVDLQSNATERLTNTLFI 303
           +       N               G RAL +    +        D +   +ER       
Sbjct: 646 AHFKLPAPNVPGVSEVNLWTLAFTGPRALWTNDGANGLRRWNVTDPKKPTSERFVPGGGE 705

Query: 304 NIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           N S     + SPD   + +  DR G+ + +   +    ++R S        D   SP G 
Sbjct: 706 NASTLQILAASPDGRAL-YTGDRAGRVRAW--DAATGAERR-SWHVRGWVTDVAVSPDGT 761

Query: 360 LIAFTKFSGEKFAIGVM----KKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +A     G    + +          ++R+L   +  +      ++P+G  L+ +   DG
Sbjct: 762 RLAAVGTGGTVSVLDLTAEPKDDPNGEKRVLELSLAGAYGNGVAFAPAGPQLV-ASDGDG 820

Query: 413 D 413
           +
Sbjct: 821 N 821



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 52/149 (34%), Gaps = 13/149 (8%)

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+  +V        D   V   DT        IG+    +L  R++ +G + L+  ++  
Sbjct: 1019 PDGGEVF---VSFGDGAAVLKGDTLAPLREWAIGDE---VLDARYTPDGAKILL-GRRTG 1071

Query: 281  AMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            A ++   D ++                 + +PD + +V  + R+G  + +   +      
Sbjct: 1072 AAELR--DARTGTLVLPPMPHKGTITGVAVAPDGATLV-TASRDGTARFW--DAATGLPL 1126

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSG 368
              S           ++P G  +A    +G
Sbjct: 1127 GPSLLHAGPVTHVAYAPDGRRVATGTGAG 1155



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 65/201 (32%), Gaps = 22/201 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +    Y  +   RV   D       +R  + R  +     S +G R        
Sbjct: 716 SPDGRAL----YTGDRAGRVRAWDAATGAE-RRSWHVRGWVTDVAVSPDGTRLAAVGTGG 770

Query: 280 EAMDIYSVDL------QSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
               +  +DL        N  +R   L+         +++P   Q+V  SD +G  + + 
Sbjct: 771 ---TVSVLDLTAEPKDDPNGEKRVLELSLAGAYGNGVAFAPAGPQLV-ASDGDGNVRCW- 825

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                     +++          + P      F   +G+   +        +      +S
Sbjct: 826 -HRETGQPMGLARQFHGEVTRMRFRPGSGE--FAVPAGDSVYLCAAPVLSGELLWPGRNS 882

Query: 391 NLQAPTWSPSGRSLIFSRKKD 411
             +   ++P G +L+ + ++ 
Sbjct: 883 RTRGLDFAPGGEALVIADERG 903


>gi|170702676|ref|ZP_02893541.1| 6-phosphogluconolactonase [Burkholderia ambifaria IOP40-10]
 gi|172061284|ref|YP_001808936.1| 6-phosphogluconolactonase [Burkholderia ambifaria MC40-6]
 gi|170132417|gb|EDT00880.1| 6-phosphogluconolactonase [Burkholderia ambifaria IOP40-10]
 gi|171993801|gb|ACB64720.1| 6-phosphogluconolactonase [Burkholderia ambifaria MC40-6]
          Length = 415

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 94/326 (28%), Gaps = 30/326 (9%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ-IIGKKFFSSPASWRKIAHTISDDIYQS 165
           GA  L+ G     G D + V +R +D K      +      +P+         +      
Sbjct: 50  GAFHLLVGTYTGHGSDGIYV-YR-FDTKTGSVAPVSSAKTVNPSYLLPSRDGRTVYAVNE 107

Query: 166 ITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQ-----ILFEPRF 219
           + G+ G    R    +            +  +  +G +  YL  S D        +    
Sbjct: 108 LPGDNGPATQRGGISAFGFDPKTGALTFIDRVSSEGNDPCYLALSPDGKYLVTANYSVAA 167

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            P      + T D   +    L        P +     + + +  FS +G+   +     
Sbjct: 168 DPGGSFAVFPTRDGGSVGSAVLTVHHEGTGPVKGRQDGAHVHSTVFSPDGRYLFVQDLGA 227

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISA-------SYSPDSSQIVFESDREGKEQLY-- 329
           + +  Y   +         T+T +  + A        +  D       S+     +++  
Sbjct: 228 DKLYGYRYTVDGSRGLISPTDTRYTPVKAGSGPRHMVFGADGRFAYVTSELNASVEVFGY 287

Query: 330 ----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
               +               +        SP G  + +    G+   I +   + +  RL
Sbjct: 288 HDGKLTPVQTLPMTVPGFKGKVGGGAIHLSPDGRFL-YVTNRGDVNEIVIYAVNRTDGRL 346

Query: 386 LV---EDSNLQAPT---WSPSGRSLI 405
                + S  + P      P+G+ LI
Sbjct: 347 KTVGRQSSLGKTPREFLIDPTGKWLI 372


>gi|82943652|dbj|BAE48802.1| saponin hydrolase precursor [Eupenicillium brefeldianum]
          Length = 618

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 58/157 (36%), Gaps = 22/157 (14%)

Query: 265 FSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           FS  G   L   S ++   +D+++V + + A  RLT+        ++S D+   V    R
Sbjct: 275 FSGAGDEILYIGSTREANNIDLFAVHITTGAVRRLTSHPEYADPIAFSHDNQWFVTMDTR 334

Query: 323 EGKEQLY---------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
               Q++         ++          +++  A  F         LI      G+ F  
Sbjct: 335 GSNRQMWMAGERYIPPLIDLVTVTAASSTRNNGARRFFQPI-----LIDRYGDRGDYFGQ 389

Query: 374 GV-MKKDGSQERLLVEDSNLQA---PTWSPSGRSLIF 406
            V  + DGS   +   D N      P +SP G  +++
Sbjct: 390 RVNYQGDGSNGSV--NDPNWNGRADPAFSPDGTRIVY 424



 Score = 36.9 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 47/152 (30%), Gaps = 9/152 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS    ++ Y     E              A +R+ +         FS + +  +    +
Sbjct: 275 FSGAGDEILYIGSTREANNIDLFAVHITTGAVRRLTSHPEYADPIAFSHDNQWFVTMDTR 334

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQLY---VMQ 332
                ++           L + + +  ++S   + ++  F+    DR G    Y    + 
Sbjct: 335 GSNRQMWM--AGERYIPPLIDLVTVTAASSTRNNGARRFFQPILIDRYGDRGDYFGQRVN 392

Query: 333 SNGSDQKRISQDKEAS-YFDPVWSPQGDLIAF 363
             G        D   +   DP +SP G  I +
Sbjct: 393 YQGDGSNGSVNDPNWNGRADPAFSPDGTRIVY 424


>gi|50978464|emb|CAH10775.1| hypothetical protein [Homo sapiens]
          Length = 286

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 79/203 (38%), Gaps = 10/203 (4%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
               ++   +FSP+   +A A+ D    +R+++ D R   +  +       + +  FS++
Sbjct: 2   GHKDVVTSVQFSPHGNLLASASRD--RTVRLWIPDKRGKFSEFKAHTAP--VRSVDFSAD 57

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+    +  +D+++ ++S+  Q      L         A +SPD   IV  S+    + +
Sbjct: 58  GQFLA-TASEDKSIKVWSMYRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSE---DKTI 112

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +  +          D         ++P G  IA +  S +   +  ++ +   +   V 
Sbjct: 113 KIWDTTNKQCVNNFSDSVGFANFVDFNPSGTCIA-SAGSDQTVKVWDVRVNKLLQHYQVH 171

Query: 389 DSNLQAPTWSPSGRSLIFSRKKD 411
              +   ++ PSG  LI +    
Sbjct: 172 SGGVNCISFHPSGNYLITASSDG 194



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 33/247 (13%), Positives = 81/247 (32%), Gaps = 29/247 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ +   D         +    +    FS + Q +A A+ D      + +    
Sbjct: 21  SASRDRTVRLWIPDKRGKFSEFKAHTAPVRSVDFSADGQFLATASEDK----SIKVWSMY 76

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R    +      +   +FS +G R ++S  +D+ + I+     +   ++  N    ++
Sbjct: 77  RQRFLYSLYRHTHWVRCAKFSPDG-RLIVSCSEDKTIKIW----DTTN-KQCVNNFSDSV 130

Query: 306 SAS----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             +    ++P  + I         + + V     +   +  Q          + P G+ +
Sbjct: 131 GFANFVDFNPSGTCIA---SAGSDQTVKVWDVRVNKLLQHYQVHSGGVNCISFHPSGNYL 187

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSK 417
                 G    + ++     + RL+        P    ++S  G   +F+     DT   
Sbjct: 188 ITASSDGTLKILDLL-----EGRLIYTLQGHTGPVFTVSFSKGGE--LFASG-GADTQVL 239

Query: 418 LYSIDLN 424
           L+  + +
Sbjct: 240 LWRTNFD 246


>gi|332663336|ref|YP_004446124.1| OmpA/MotB domain-containing protein [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332332150|gb|AEE49251.1| OmpA/MotB domain protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 665

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 75/244 (30%), Gaps = 37/244 (15%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR---IGNFRSMILAPRFSS---N 268
           + P  + +Q  + Y                R     +R   +GN  +  L    S+   +
Sbjct: 191 YFPCLTNDQSLLFYTRMSATGRDEDLYYSIREVNGWRRGDAVGNTFNTKLDEGMSTLVRD 250

Query: 269 GKRALISVQKD----EAMDIYSVDLQSNATERL------TNTLFINISASYSPDSSQIVF 318
           G+R   +  K        DI+   ++ +    +       N+      A+ S D   + F
Sbjct: 251 GRRMFFTACKREDVIGVCDIWEAQIEGHEIREVKPIQGHPNSEKWESQAAISCDGRTLYF 310

Query: 319 ESDRE---GKEQLYVMQ--SNGSDQKRISQDKEASYF----DPVWSPQGDLIAFTKFSG- 368
            S RE   G   ++      +G+     +     +       P  S  G  + FT     
Sbjct: 311 SSIREGGLGGADIWYSNKMLDGNWSAPKNMGPNINTAEDEESPFISNDGRTLFFTSTGHL 370

Query: 369 --EKFAIGVMKKDGSQERLLVE--DSNLQAP------TWSPSGRSLIFSRKK-DGDTGSK 417
                 I +   +      L       + +P        S  GR+  F+  + +G  G  
Sbjct: 371 SLGDQDIFMSFLNEKGVWGLPTNLGPEINSPFTERCFFLSADGRTGYFASNRPEGFGGMD 430

Query: 418 LYSI 421
           +Y +
Sbjct: 431 IYQV 434


>gi|328876087|gb|EGG24451.1| WD40 repeat-containing protein [Dictyostelium fasciculatum]
          Length = 510

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 16/144 (11%)

Query: 185 VSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VSG    +  V +   A           Q++    FSPN +  A A++D      + L D
Sbjct: 370 VSGSDDFTCIVWNPAHAKAPVARLAGHQQLINLVSFSPNGRYFASASFDK----SIKLWD 425

Query: 244 TRIDRAPKRIGNFRSMILA---PRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTN 299
              ++    +GNFR  + A     +SS+ +  + S  KD  + I+  D+++      L  
Sbjct: 426 AANNKF---LGNFRGHVGAVYQVCWSSDSRYLV-SGSKDSTLKIW--DIKTKKMTIELPG 479

Query: 300 TLFINISASYSPDSSQIVFES-DR 322
                 +  +SPD   +V  S DR
Sbjct: 480 HADEVYTVDWSPDGQSVVSGSKDR 503



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 74/209 (35%), Gaps = 27/209 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +    FSP+   +A  +   +  LR++ ++T+      +     + +L   +S
Sbjct: 136 MEGHTEAVLNSAFSPDGSGLA--SVGGDGTLRIWDLNTQTPIFTCK--GHTNWVLQVSWS 191

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNA---------TERLTNTLFINISA-SYSPDSSQI 316
            +GK+   +   +  + I+  + ++           T+ +T    +       +P+ +++
Sbjct: 192 PDGKKIA-TGGMEGEIRIW--NPKTGKQMGSVLRGHTKFIT---ALQWEPYHLNPNCTRL 245

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              S ++   +++   +  +           S     WS  G+ + ++        I V 
Sbjct: 246 A-SSSKDATVKIW--DTESNKCLMTLSGHTMSVTCLRWS--GEGLIYSGSQDRT--IRVF 298

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +  +    +E       + + +   ++
Sbjct: 299 NTNEGRLIRALEGHAHWVNSIALNTDYVL 327



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 12/100 (12%), Positives = 32/100 (32%), Gaps = 8/100 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SP+       S     + + +  +  +      +    + +   WS     +      
Sbjct: 404 SFSPNGRYFASASF---DKSIKLWDAANNKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKD 460

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
                + +      +  + +     +  T  WSP G+S++
Sbjct: 461 ST---LKIWDIKTKKMTIELPGHADEVYTVDWSPDGQSVV 497



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 69/182 (37%), Gaps = 16/182 (8%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            +     T + R    +      +L   FS +G     SV  D  + I+ ++ Q+     
Sbjct: 120 PQAVFRITPVTRCSSSMEGHTEAVLNSAFSPDGSGLA-SVGGDGTLRIWDLNTQTPIFT- 177

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLY---VMQSNGSDQKRISQDKEASYFDP- 352
                   +  S+SPD  +I      EG+ +++     +  GS  +  ++   A  ++P 
Sbjct: 178 CKGHTNWVLQVSWSPDGKKIA-TGGMEGEIRIWNPKTGKQMGSVLRGHTKFITALQWEPY 236

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRK 409
             +P    +A +        + +   + ++  L+    +  + T   WS  G  LI+S  
Sbjct: 237 HLNPNCTRLASSSKDAT---VKIWDTESNKC-LMTLSGHTMSVTCLRWS--GEGLIYSGS 290

Query: 410 KD 411
           +D
Sbjct: 291 QD 292



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 39/135 (28%), Gaps = 7/135 (5%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                +D   +            R+   + +I    FS NG+    S   D+++ ++  D
Sbjct: 369 MVSGSDDFTCIVWNPAHAKAPVARLAGHQQLINLVSFSPNGRYFA-SASFDKSIKLW--D 425

Query: 289 LQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             +N         +       +S DS  +V  S       L +                 
Sbjct: 426 AANNKFLGNFRGHVGAVYQVCWSSDSRYLVSGSK---DSTLKIWDIKTKKMTIELPGHAD 482

Query: 348 SYFDPVWSPQGDLIA 362
             +   WSP G  + 
Sbjct: 483 EVYTVDWSPDGQSVV 497



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/91 (14%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 198 RDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D AN ++L         +++  +S + + +   + D      + + D +  +    +  
Sbjct: 424 WDAANNKFLGNFRGHVGAVYQVCWSSDSRYLVSGSKDS----TLKIWDIKTKKMTIELPG 479

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
               +    +S +G+  ++S  KD  + I+ 
Sbjct: 480 HADEVYTVDWSPDGQS-VVSGSKDRLLKIWR 509



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 38/99 (38%), Gaps = 9/99 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +L + D +     +        + +  +SP+ +K+A  T   E  +R++   T   +   
Sbjct: 163 TLRIWDLNTQTPIFTCKGHTNWVLQVSWSPDGKKIA--TGGMEGEIRIWNPKTG-KQMGS 219

Query: 252 RIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIY 285
            +      I A ++     + N  R   S  KD  + I+
Sbjct: 220 VLRGHTKFITALQWEPYHLNPNCTRLA-SSSKDATVKIW 257


>gi|327293522|ref|XP_003231457.1| hypothetical protein TERG_07757 [Trichophyton rubrum CBS 118892]
 gi|326466085|gb|EGD91538.1| hypothetical protein TERG_07757 [Trichophyton rubrum CBS 118892]
          Length = 1667

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/236 (17%), Positives = 75/236 (31%), Gaps = 35/236 (14%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            PS+ +    P FS +   +   +    ++    + DT        I   +    +P    
Sbjct: 953  PSQARHFISPAFSKDGTLITSISGPATEVKSFRVWDTTTGALLNTIEYLKDADFSPS--- 1009

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINI--SASYSPDSS-QIVFESDR 322
              ++ ++SV    ++ I   D  +    R+  T     +   S S+SPD    IV+ +  
Sbjct: 1010 --EKLVVSVHFSSSVKIS--DAVTGTVIRVLETTGHGNSAIHSVSFSPDGKLVIVWVAQ- 1064

Query: 323  EGKEQLYVMQSNGSDQKRIS-----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                 + V         +        +   +     +S    LI      G       M 
Sbjct: 1065 ---MLVQVWDVESGTILKTLERCHCPNNFGTPRHLAFSSDNKLIG-ASIMGGHPETWSMT 1120

Query: 378  -----KDGSQERLLVEDSNLQAPTWSPSGRSLIF-----SRKKDGDTGSKLYSIDL 423
                 +DGS    L         T+SP  + +       +R  D    S LY+ID 
Sbjct: 1121 CIWNAEDGSVVYQL---KGCYTYTFSPDSKLIALVIAGETRILDARKRSVLYTIDA 1173



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/269 (14%), Positives = 87/269 (32%), Gaps = 48/269 (17%)

Query: 188  IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                 L + D     +  L  + + +     FSP+   +A  +   ++++R++ M T   
Sbjct: 1248 NWACYLRLWDVASGKLVELFKNSNSV----SFSPDGTVMA--SGSPDNLIRIWDMPTPTS 1301

Query: 248  RAPKRIGN----------------------FRSMILAPRFSSNGKRAL---ISVQKDEAM 282
                 I N                      +   I A   S +GK A      +    A 
Sbjct: 1302 AHLIPILNKAKDSIKRLWSAPAPEEKIASAYGGNIFALVLSPDGKLAASGGYGLDATGAP 1361

Query: 283  DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
             +     +    ++  +   I+ +  + P   ++V  +D  G   L    +   ++  + 
Sbjct: 1362 VVIWDVARGVPLQQSKSNYSIDKNILFWPSDKRLV-SADAYGW--LVSWDATSLEELPMI 1418

Query: 343  QDKEASYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSN--LQA 394
                    +   SP   ++         +   E++ I     +  +  L +   +  ++A
Sbjct: 1419 HKSHRLVLNMAISPNEGMVIMALDAYPPELMHEEYHIY--DFNTGKLLLELNGHHAKVEA 1476

Query: 395  PTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             T+SP  R +     +      K++S D 
Sbjct: 1477 LTFSPDSRLIATGSSR----TVKVWSTDT 1501



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 52/326 (15%), Positives = 102/326 (31%), Gaps = 43/326 (13%)

Query: 127  EFRLWDVKDRKQIIGKKFFSSPA----------SWRKIAHTISDDI---YQSITGEKGDF 173
             FR+WD      +   ++                    +  ISD +      +    G  
Sbjct: 983  SFRVWDTTTGALLNTIEYLKDADFSPSEKLVVSVHFSSSVKISDAVTGTVIRVLETTGHG 1042

Query: 174  NSRILFVSESVVSG---IIKNSLCVMDRD---GANIRYLTPSRDQILF-EPR---FSPNQ 223
            NS I  VS S       +    + V   D   G  ++ L        F  PR   FS + 
Sbjct: 1043 NSAIHSVSFSPDGKLVIVWVAQMLVQVWDVESGTILKTLERCHCPNNFGTPRHLAFSSD- 1101

Query: 224  QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM- 282
             K+  A+          +           +   +       FS + K   + +  +  + 
Sbjct: 1102 NKLIGASIMGGHPETWSMTCIWNAEDGSVVYQLKGCYTY-TFSPDSKLIALVIAGETRIL 1160

Query: 283  ------DIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                   +Y++D  +N    L   L +          ++ I F     GK     +   G
Sbjct: 1161 DARKRSVLYTIDACTNVAFSLDGKLALAQAEPDIL-GATNISFRVAATGKPTGVTIHLKG 1219

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            S     ++ +       V+SP G L+A   ++     + +      +   L ++SN  + 
Sbjct: 1220 SSTPD-TELRHMDVDHMVFSPDGKLLATYNWA---CYLRLWDVASGKLVELFKNSN--SV 1273

Query: 396  TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            ++SP G  +        D   +++ +
Sbjct: 1274 SFSPDGTVMA---SGSPDNLIRIWDM 1296


>gi|312377425|gb|EFR24257.1| hypothetical protein AND_11263 [Anopheles darlingi]
          Length = 347

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 66/186 (35%), Gaps = 12/186 (6%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           + +      +  K I   +  I    +SS+  R L++   D+ + I+ +       + L 
Sbjct: 14  IKIWGAYDGKFEKTISGHKLGISDVAWSSD-SRLLVTASDDKTLKIWELS-SGKCLKTLK 71

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                    +++P S+ IV  S     E + +         +             ++  G
Sbjct: 72  GHTNYVFCCNFNPQSNLIVSGSF---DESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDG 128

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGS 416
            LI  + + G    I      G   + L++D N  +    +SP+G+ ++ +     D   
Sbjct: 129 SLIVSSSYDG-LCRIW-DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---DNTL 183

Query: 417 KLYSID 422
           KL+   
Sbjct: 184 KLWDYS 189


>gi|167388307|ref|XP_001738513.1| hypothetical protein [Entamoeba dispar SAW760]
 gi|165898225|gb|EDR25153.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
          Length = 463

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 76/263 (28%), Gaps = 36/263 (13%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           Q +T  +   N  IL+ S           + + D   AN  ++       +     S   
Sbjct: 232 QGVTSIRWSGNENILYTSSR------DRLINIYDMRQANPIHVLKGHSHWINSISTS--- 282

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
                     +        D  ID A KR+               G   L+S   D  + 
Sbjct: 283 ----TEYVLRQGGYDPLEKDKGIDGAKKRLNKIIGC--------GGGERLVSASDDGTLY 330

Query: 284 IYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++ + LQS     RL       +S  +SPDS  I         + + +            
Sbjct: 331 MW-MPLQSQKPIHRLVGHSSQVMSCKFSPDSRIIASTGC---DKNMRIWDGFTGSCLHTY 386

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPT--WS 398
           +    + +   WSP   ++             V+       +L+        +  +  WS
Sbjct: 387 RGHVQTIYGCAWSPDSRMLVSASKDSTVKLWNVVP---GCRKLMTNLPGHLDEVFSIDWS 443

Query: 399 PSGRSLIFSRKKDGDTGSKLYSI 421
             G S+  +     D   K++  
Sbjct: 444 LDGSSVATASY---DHTIKIWRY 463



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 45/129 (34%), Gaps = 9/129 (6%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I++ +       + +    S  + S     ++ + D    +  +      Q ++   +SP
Sbjct: 341 IHRLVGHSSQVMSCKFSPDSRIIASTGCDKNMRIWDGFTGSCLHTYRGHVQTIYGCAWSP 400

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQK 278
           + + +  A+ D      V L +  +    K + N       + +  +S +G     +   
Sbjct: 401 DSRMLVSASKDS----TVKLWNV-VPGCRKLMTNLPGHLDEVFSIDWSLDGSSVA-TASY 454

Query: 279 DEAMDIYSV 287
           D  + I+  
Sbjct: 455 DHTIKIWRY 463


>gi|13752360|gb|AAK38633.1|AF320333_1 G protein beta subunit-like protein Rkp1 [Schizosaccharomyces
           pombe]
 gi|11992988|gb|AAA56865.2| guanine nucleotide regulatory protein [Schizosaccharomyces pombe]
          Length = 314

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 76/265 (28%), Gaps = 61/265 (23%)

Query: 193 LCVMDRDGAN---IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           L  + RD  N    +         + +   S +      A++D      + L D      
Sbjct: 42  LWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDK----TIRLWDLEKGEC 97

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-- 307
             +     S +L+   S + ++ ++S  +D+ + I+  ++  N    +T+    +  +  
Sbjct: 98  THQFVGHTSDVLSVSISPDNRQ-VVSGSRDKTIKIW--NIIGNCKYTITDGGHSDWVSCV 154

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SP+   + F S     + + V        +               SP G L A     
Sbjct: 155 RFSPNPDNLTFVS-AGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRD 213

Query: 368 GEKF---------------------------AIGVMKKDGSQERL-----------LVED 389
           G                                 +    GS  R+           L  D
Sbjct: 214 GTLMLWDLNESTHLYSLEAKANINALVFSPNRYWLCAATGSSIRIFDLETQEKVDELTVD 273

Query: 390 S-----NLQAP-----TWSPSGRSL 404
                     P     TWSP G++L
Sbjct: 274 FVGVGKKSSEPECISLTWSPDGQTL 298



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 78/223 (34%), Gaps = 22/223 (9%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--RFS 220
           +Q +       +  I   +  VVSG    ++ + +  G N +Y         +    RFS
Sbjct: 99  HQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIG-NCKYTITDGGHSDWVSCVRFS 157

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           PN   + + +   +  ++V+  D                + A   S +G     S  +D 
Sbjct: 158 PNPDNLTFVSAGWDKAVKVW--DLETFSLRTSHYGHTGYVSAVTISPDGSLCA-SGGRDG 214

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPD---------SSQIVFESDREGKEQLYVM 331
            + ++ ++ +S     L     IN    +SP+         SS  +F+ + + K     +
Sbjct: 215 TLMLWDLN-ESTHLYSLEAKANINA-LVFSPNRYWLCAATGSSIRIFDLETQEKVDELTV 272

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              G  +K      E       WSP G  + F+ ++     + 
Sbjct: 273 DFVGVGKK----SSEPECISLTWSPDGQTL-FSGWTDNLIRVW 310


>gi|33877287|gb|AAH02884.2| NLE1 protein [Homo sapiens]
          Length = 484

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 102 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 157

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEA------SYFDPVWS 355
            +S S+SPD  ++       G    Q+ +   +   Q   +    +      S+     +
Sbjct: 158 VLSISWSPDGKKLA-----SGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHAN 212

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + +     G  ER+L     ++    W   G  L++S  +D
Sbjct: 213 PECRYVASSSKDGS---VRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 265



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 339 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 395

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 396 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 454

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 455 ADEVYAVDWSPDGQRVA 471



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 130 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA---SGCKNGQILLWDPST 186

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ I+           LT  
Sbjct: 187 GKQVGRTLAGHSKWITGLSWEPLHANPECRYVA-SSSKDGSVRIWDT-TAGRCERILTGH 244

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 245 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 297



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 301 RTGAFEPAEASVNPQDLQGSLQELKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 357

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 358 AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 395

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 396 KLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAM 449

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 450 DLPGHADEVYAVDWSPDGQRVA 471


>gi|47550554|dbj|BAD20231.1| hypothetical protein [Kitasatospora setae]
 gi|311899229|dbj|BAJ31637.1| hypothetical protein KSE_58670 [Kitasatospora setae KM-6054]
          Length = 414

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 63/196 (32%), Gaps = 16/196 (8%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            ++ Y      + +  Y   T    A  ++G++     A   S +G +A +    + +  
Sbjct: 54  HRLVYLANTRANSVTAYDPVTASPVATVQVGSYPQ---AVAVSPDGSQAYVV--NNGSGT 108

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIV---FESDREGKEQLYVMQSNGSDQKR 340
           +  +D  +           +    ++SPD ++     + S R G     V+ +       
Sbjct: 109 VSVLDTATGTVAATIAVGRLPGPVAFSPDGARAYVGHYVSPRAGGVD--VIDTATRTVTA 166

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TW 397
                    F    +P G  +      G   ++ V+          + DS  + P     
Sbjct: 167 TVPVGSQP-FGIAVTPDGGRVYVANLIGG--SVSVIDAATDSLTGTIVDSRARMPAALAV 223

Query: 398 SPSGRSLIFSRKKDGD 413
           +P G  +  +    G+
Sbjct: 224 APDGGRVYVANYGSGN 239



 Score = 37.3 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 22/171 (12%), Positives = 49/171 (28%), Gaps = 8/171 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+  +     Y       V ++DT             S       + +G R  ++  
Sbjct: 133 AFSPDGARAYVGHYVSPRAGGVDVIDTATRTVT-ATVPVGSQPFGIAVTPDGGRVYVANL 191

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              ++ +      S     + +   +  + + +PD  ++   +   G   L V+ +    
Sbjct: 192 IGGSVSVIDAATDSLTGTIVDSRARMPAALAVAPDGGRVYVANYGSGN--LSVIDTASGA 249

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
              +             SP G        S +  ++     D    R+   
Sbjct: 250 VSGVITVGAGP-GGVSLSPDGARAYVPSQSDDTVSV----VDTGAGRVTAT 295


>gi|315044745|ref|XP_003171748.1| transcriptional repressor rco-1 [Arthroderma gypseum CBS 118893]
 gi|311344091|gb|EFR03294.1| transcriptional repressor rco-1 [Arthroderma gypseum CBS 118893]
          Length = 591

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 70/223 (31%), Gaps = 26/223 (11%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +    + DI RV  +D   +          S++   RFS++GK                 
Sbjct: 263 WYAVFNPDIPRVLDVDLVHNLI------HDSVVCCVRFSADGKHVA----TGCNRSAQIF 312

Query: 288 DLQSNATERLTNTLFIN-------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           ++ +           ++        S  +SPD   +   ++    +Q+ V        K 
Sbjct: 313 EVSTGLLVSTLQDDSVDKDGDLYIRSVCFSPDGRYLATGAE---DKQIRVWDIASRTIKN 369

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           I    E   +   ++  G  IA            ++  DG QE +L  +  +     SP 
Sbjct: 370 IFSGHEQDIYSLDFARNGRYIASGSGDKTVRLWDIV--DGKQELILSIEDGVTTVAISPD 427

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           GR +        D   +++     G     + +P    D  + 
Sbjct: 428 GRYVAAGSL---DKSVRVWDT-TTGYLVERLESPDGHRDSVYS 466



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 68/220 (30%), Gaps = 20/220 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    D  +    FSP+ + +A    D     ++ + D                I +  
Sbjct: 327 SVDKDGDLYIRSVCFSPDGRYLATGAEDK----QIRVWDIASRTIKNIFSGHEQDIYSLD 382

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F+ NG+    S   D+ + ++ + +       L+    +  + + SPD   +   S  + 
Sbjct: 383 FARNGRYIA-SGSGDKTVRLWDI-VDGKQELILSIEDGV-TTVAISPDGRYVAAGSL-DK 438

Query: 325 KEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK------ 377
             +++   +    ++  S D    S +   ++P G  +             +        
Sbjct: 439 SVRVWDTTTGYLVERLESPDGHRDSVYSVAFAPNGRDLVSGSLDKTIKMWELTPPRGMVP 498

Query: 378 ---KDGSQERLLVEDSNLQAPTW--SPSGRSLIFSRKKDG 412
                G +     E       +   +P G  ++   K  G
Sbjct: 499 GTGPKGGKCVRTFEGHKDFVLSVCLTPDGHWVMSGSKDRG 538


>gi|172036390|ref|YP_001802891.1| WD repeat-containing protein [Cyanothece sp. ATCC 51142]
 gi|171697844|gb|ACB50825.1| WD-repeat protein [Cyanothece sp. ATCC 51142]
          Length = 349

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 62/196 (31%), Gaps = 24/196 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +   + DD     + + D       K IG       + +++ +G   +    
Sbjct: 150 AISPDGNNIVSVSGDDR---TIRIWDLESGELIKTIGANIGPTTSVQYTPDGTLFITGAI 206

Query: 278 KDEAM----DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            D+      D  + +L + ++++             S D +Q+V       +  +     
Sbjct: 207 GDDRTFKFWDATTFELLNTSSQQ----PGFINDLKISSDGTQLVAAV----RNFVKSWDL 258

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----ED 389
               Q R  +  +        SP    +A     G      VM  D +  R +       
Sbjct: 259 TTLKQTRSMKGPKLEINTIAVSPDNRTVATANKEGT-----VMLFDLATGRKITTLQGHR 313

Query: 390 SNLQAPTWSPSGRSLI 405
             + +  +SP G+ L 
Sbjct: 314 GWVLSLAFSPDGQFLY 329



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 73/227 (32%), Gaps = 32/227 (14%)

Query: 221 PNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            N   +A+    D     D   V ++     R    +      +     S +G   +   
Sbjct: 103 NNYSSIAFNLEKDILVVGDDQTVMILSLSTGRKLSFLREHTGKVSDVAISPDGNNIVSVS 162

Query: 277 QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYV-MQSN 334
             D  + I+  DL+S    + +   +    S  Y+PD +  +F +   G ++ +    + 
Sbjct: 163 GDDRTIRIW--DLESGELIKTIGANIGPTTSVQYTPDGT--LFITGAIGDDRTFKFWDAT 218

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
             +    S  +     D   S  G  +     +       V   D      L +  +++ 
Sbjct: 219 TFELLNTSSQQPGFINDLKISSDGTQLVAAVRN------FVKSWD---LTTLKQTRSMKG 269

Query: 395 P-------TWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINT 433
           P         SP  R++  +  K+G     +   DL  GR  T +  
Sbjct: 270 PKLEINTIAVSPDNRTVA-TANKEGT----VMLFDLATGRKITTLQG 311



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 63/198 (31%), Gaps = 30/198 (15%)

Query: 115 RVIKEGKDRLRVE-----FRLWDVKDRKQIIG--------KKFFSSPASWRKIAHTISDD 161
            +  +G + + V       R+WD++  + I               +P     I   I DD
Sbjct: 150 AISPDGNNIVSVSGDDRTIRIWDLESGELIKTIGANIGPTTSVQYTPDGTLFITGAIGDD 209

Query: 162 ------------IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
                       +  + + + G  N   +    + +   ++N +   D            
Sbjct: 210 RTFKFWDATTFELLNTSSQQPGFINDLKISSDGTQLVAAVRNFVKSWDLTTLKQTRSMKG 269

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +     SP+ + VA           V L D    R    +   R  +L+  FS +G
Sbjct: 270 PKLEINTIAVSPDNRTVA----TANKEGTVMLFDLATGRKITTLQGHRGWVLSLAFSPDG 325

Query: 270 KRALISVQKDEAMDIYSV 287
           +    S  +D+ + ++ +
Sbjct: 326 QFL-YSGAEDKIVKVWQL 342



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 65/168 (38%), Gaps = 24/168 (14%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +   + +  F  ++ +   + +G+  L++        + ++DL++     +  +  + ++
Sbjct: 50  NITVEDLQGFNGVVKSLAVTPDGQLLLVAT---GDGLLSAIDLETKE---ILYSKAVLVN 103

Query: 307 ASYSPDSSQIVFESDRE----GKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +YS     I F  +++    G +Q + ++  +   +    ++      D   SP G+ I
Sbjct: 104 -NYS----SIAFNLEKDILVVGDDQTVMILSLSTGRKLSFLREHTGKVSDVAISPDGNNI 158

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLI 405
                SG+   I +   +  +    +       PT    ++P G   I
Sbjct: 159 V--SVSGDDRTIRIWDLESGELIKTI--GANIGPTTSVQYTPDGTLFI 202


>gi|149921594|ref|ZP_01910044.1| serine/threonine protein kinase with WD40 repeats [Plesiocystis
           pacifica SIR-1]
 gi|149817546|gb|EDM77015.1| serine/threonine protein kinase with WD40 repeats [Plesiocystis
           pacifica SIR-1]
          Length = 1184

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 11/227 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             + +G     + V   D A +        Q +F+ R      +   A++      R  +
Sbjct: 773 RRLATGSWSGQIRVWALDQAPLVTSLEGHGQRVFDVRADSQGTRFVTASFGG----RARI 828

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                  A + +    +++ A  FS +G     + +    +       +    + L +  
Sbjct: 829 WRAADGAALETLDGGNAVLNAAVFSPSGDSVATAGKGPVLLWRLE-PGRDARAQVLLDEG 887

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 ++     ++   +  + + +++ +  +G +  ++ +          + P G+ +
Sbjct: 888 GQVWDLAFDDGGERLAAAAS-DARVRVWTLTRDGPEL-QVLEGHAGRVVSVAFEPGGERL 945

Query: 362 AFTKFSGEKFAIGVMKKDG---SQERLLVEDSN-LQAPTWSPSGRSL 404
           A     G          DG       L   D   +    WSP GR L
Sbjct: 946 ASAGADGTVRVWSPGDGDGDPRGVHVLPQRDPLAMDTLRWSPDGRWL 992



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 55/165 (33%), Gaps = 25/165 (15%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +    +++ A  F + G+    S     A+  +SVD  +     L        S + SP 
Sbjct: 465 LRGHEAVVTAMVFDAAGRWL-YSADAKGAVWRWSVD--TGEGRALYQHGAEVSSLALSPA 521

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI----------- 361
            S++   S  +G+ +L+  ++  S  +R       +     +S     +           
Sbjct: 522 GSELASGS-VDGELRLWTERTGPSTLER----YGGAVRQLSFSADARRLLTAAKDGLARV 576

Query: 362 ------AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                 A   F+G    +     D S+ R+L    +  A  W   
Sbjct: 577 HALDGGATRTFTGHAGPVYAASFDASEARVLTTSLDRSARVWRAD 621


>gi|332883936|gb|EGK04216.1| hypothetical protein HMPREF9456_01244 [Dysgonomonas mossii DSM
           22836]
          Length = 847

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/208 (11%), Positives = 67/208 (32%), Gaps = 34/208 (16%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           T+ ++      L + +   +     + R   LA  +    ++     + D   ++ ++D 
Sbjct: 230 TFGEKSATTTELYNLKTRISLLIDTDGRKSQLA--WMPKSEKMFYVSKDDSGSELRTIDP 287

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFES------------------DR----EGKEQ 327
            +     L   +  + S  +SPD   + +                    DR      +  
Sbjct: 288 ATLQEAVLAKNI-PDESIMFSPDEKTLFYTKLEKEAENKNDLRLLRSPEDRQPGYGNRSF 346

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAIGVMKKDG 380
           +Y         ++++    ++  +   S     +         T       ++  +    
Sbjct: 347 IYKYDLATGLSQQLTFGTHSTALN-DISEDSKQLLISISEETVTSRPFSTNSMFKLDLST 405

Query: 381 -SQERLLVEDSNLQAPTWSPSGRSLIFS 407
            + + L  +DS   + ++SP G+ ++ +
Sbjct: 406 MTVDTLWTKDSFAYSASFSPDGKKILIA 433



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 50/312 (16%), Positives = 97/312 (31%), Gaps = 55/312 (17%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD- 232
            S  +F      SG    ++     D A ++    +++       FSP+++ + Y   + 
Sbjct: 266 KSEKMFYVSKDDSGSELRTI-----DPATLQEAVLAKNIPDESIMFSPDEKTLFYTKLEK 320

Query: 233 --------------------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
                                 +   +Y  D     + +      S  L    S + K+ 
Sbjct: 321 EAENKNDLRLLRSPEDRQPGYGNRSFIYKYDLATGLSQQLTFGTHSTALN-DISEDSKQL 379

Query: 273 LISVQKD-------EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI-------VF 318
           LIS+ ++           ++ +DL +   + L        SAS+SPD  +I        F
Sbjct: 380 LISISEETVTSRPFSTNSMFKLDLSTMTVDTLWTKDSFAYSASFSPDGKKILIAGAGEAF 439

Query: 319 ES----------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                               ++M         I++D   S     W+ + +LI F     
Sbjct: 440 NGIGLNIEEEQVANSYNTLAFIMDLETKKIDPITKDFNPSIDAYFWNKKDNLIYFRTTDK 499

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSRKKDGDTGSKLYSIDLNGR 426
           +   +            L  D  +   T+S +G +L  I++     ++    Y  DL  +
Sbjct: 500 DCVNMYTYNLSTKVFSKLPLDEEVIR-TFSTAGNALLGIYAGVSVSNSTRG-YIYDLKTQ 557

Query: 427 NETLINTPAYAS 438
               I  P    
Sbjct: 558 KSIRIADPYQER 569


>gi|302695295|ref|XP_003037326.1| hypothetical protein SCHCODRAFT_73257 [Schizophyllum commune H4-8]
 gi|300111023|gb|EFJ02424.1| hypothetical protein SCHCODRAFT_73257 [Schizophyllum commune H4-8]
          Length = 525

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 76/233 (32%), Gaps = 30/233 (12%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG +   + + D     N         +++ +  FS + ++    +YD     ++ L DT
Sbjct: 253 SGSMDTKIKLWDVYTHGNCLRTFHGHVKMVKDICFSNDGRRFLSCSYDR----QMKLWDT 308

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
              +  KR  N + +    +F  +  +  I +       I   D+ S    +     L  
Sbjct: 309 ETGQCIKRFSNGK-IPYTVKFHPDEDKQNIFLAGMSDKKIIQYDINSGEITQEYDQHLGP 367

Query: 304 NISASYSPDSSQIVFESD----REGKEQL-----YVMQSNGSDQKRISQDKEASYFDPVW 354
             + ++  ++ + V  SD    R     +     Y+ + +      ++      YF    
Sbjct: 368 VNTITFVDENRRFVTTSDDKTIRAWDFDIPVVIKYIAEPHMHSMPAVTLHPSNRYFAAQ- 426

Query: 355 SPQGDLIAFTK---FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           S    ++ ++        K         G   ++           +SP G+ L
Sbjct: 427 SLDNQILVYSTDNFRQNRKKRFAGHSVAGYACQV----------GFSPDGKWL 469


>gi|297463065|ref|XP_001788325.2| PREDICTED: WD repeat domain 5 [Bos taurus]
          Length = 330

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 83/226 (36%), Gaps = 20/226 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K +      I
Sbjct: 31  YALKFTLEGHTEAVSSVKFSPNGEWLASSSADK----VIIIWGAYDGKYEKTLKGHNLEI 86

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+  R + S   D+ + I+  D++S    + L          +++P S+ I+  
Sbjct: 87  SDVAWSSDSSRLV-SASDDKTLKIW--DVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISG 143

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + + +       +             ++  G LI    + G      +    
Sbjct: 144 SF---DESVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDG---VCRIWDAA 197

Query: 380 GSQ-ERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             Q  + LV+D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 198 SGQCLKALVDDDNPPVSFVKFSPNGKYILIATL---DNTLKLWDYS 240



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 81/233 (34%), Gaps = 20/233 (8%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG   + L    +  + +  +S +  ++  A+ D      + + D R  +  K +    
Sbjct: 71  YDGKYEKTL-KGHNLEISDVAWSSDSSRLVSASDDK----TLKIWDVRSGKCLKTLKGHS 125

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           + +    F+      +IS   DE++ I+ V       + L+       +  ++   S IV
Sbjct: 126 NYVFCCNFNPP-SNLIISGSFDESVKIWEV-KTGKCLKTLSAHSDPVSAVHFNCSGSLIV 183

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S  +G  +++   ++G   K +  D         +SP G  I           +    
Sbjct: 184 SGSY-DGVCRIWDA-ASGQCLKALVDDDNPPVSFVKFSPNGKYILIATLDNT-LKLWDYS 240

Query: 378 KDGSQERLLVEDSNLQAPTWSPS----GRSLIFSRKKDGDTGSKLYSIDLNGR 426
           + G   +      N +   ++      G+ ++      G   + +Y  +L  +
Sbjct: 241 R-GRCLKTYTGHKNEKYCVFASFSVTGGKWIV-----SGSEDNLVYIWNLQTK 287


>gi|72014208|ref|XP_784087.1| PREDICTED: similar to Prp8bp-pending protein [Strongylocentrotus
           purpuratus]
 gi|115955668|ref|XP_001178279.1| PREDICTED: similar to Prp8bp-pending protein [Strongylocentrotus
           purpuratus]
          Length = 349

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 88/288 (30%), Gaps = 25/288 (8%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRF 219
            I      E   F++R     +S+ S     S+ + +  G    Y +       + E  +
Sbjct: 50  AIMLLTGHEGEIFSARFHPNGQSLASASFDRSILLWNVYGECENYGVLKGHQGAVMELHY 109

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +  ++     D      V L DT      KR+    S + +  ++  G   + S   D
Sbjct: 110 NTDGSQIVSCATDK----MVCLWDTETGARVKRMRGHTSFVNSCYYARRGPSLVTSGSDD 165

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             + I+  D +     +   + +  ++ S++  S QI+          + V     +   
Sbjct: 166 GTIKIW--DTRKRGCAQTFQSTYQVLAVSFNDTSDQII---SGGIDNDMKVWDLRKNGLL 220

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQA--- 394
                   S      SP G  I           I  ++   S ER   + +         
Sbjct: 221 YKMSGHSDSVTGIELSPDGSYIVSNSMDNT-LRIWDVRPFASPERCVKIFQGHQHNFEKN 279

Query: 395 ---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
               +WSP G  +       G     +Y  D   R   L   P +   
Sbjct: 280 LLRCSWSPDGSKVA-----AGSADRHVYVWDTTSR-RILYKLPGHVGS 321


>gi|74221147|dbj|BAE42074.1| unnamed protein product [Mus musculus]
          Length = 485

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 158

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGS-DQKRISQDKEASYFDPVW-----S 355
            +S S+SPD  ++       G    Q+ +   +      R   D         W     +
Sbjct: 159 VLSISWSPDGKKLA-----SGCKNGQVLLWDPSTGLQVGRTLTDHSIWITGLSWEPLHMN 213

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + V     G  ER+L     ++    W   G  L++S  +D
Sbjct: 214 PECRYVASSSKDGS---VRVWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 266



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASF---DKSI 396

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLATDLPGH 455

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 456 ADEVYAVDWSPDGQRVA 472



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/177 (10%), Positives = 52/177 (29%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 131 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA---SGCKNGQVLLWDPST 187

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + + +    I    +     +   +    S  KD ++ ++           LT  
Sbjct: 188 GLQVGRTLTDHSIWITGLSWEPLHMNPECRYVA-SSSKDGSVRVWDT-TAGRCERILTGH 245

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 246 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 37/100 (37%), Gaps = 6/100 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++LF  +S +         +   DG   +YL         +++  +S + + +   + D 
Sbjct: 377 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 436

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                + + D +  +    +      + A  +S +G+R  
Sbjct: 437 ----TLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVA 472


>gi|298241279|ref|ZP_06965086.1| 40-residue YVTN family beta-propeller repeat protein [Ktedonobacter
           racemifer DSM 44963]
 gi|297554333|gb|EFH88197.1| 40-residue YVTN family beta-propeller repeat protein [Ktedonobacter
           racemifer DSM 44963]
          Length = 502

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 75/199 (37%), Gaps = 9/199 (4%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ ++V + T   E+ + V    T  ++A   + N   M +   FS + K   +      
Sbjct: 147 PDGKEV-WVTVRGENYVSVLDGATYQEKARITVANGPGMTI---FSPDDKYGYVCSSFTP 202

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D+ +V       +R+        + + +PD  Q+ +     G+ Q++  Q   S  K 
Sbjct: 203 ETDVITV-ADHKVIKRIPQASPFCPNIAATPDGKQVWYTLKDTGRVQVFDGQPPFSMLKT 261

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SP 399
           +      ++ + V +  G   A+    G    + V + D   +   +    L    W S 
Sbjct: 262 LDTGPITNHVNIVHNAHGTF-AYITI-GGLNEVKVFRTDNFAQVATIPVGALPHGIWPSG 319

Query: 400 SGRSLIFSRKKDGDTGSKL 418
            G  + +   ++GD+   +
Sbjct: 320 DGTRV-YVGLENGDSLVAI 337



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 73/209 (34%), Gaps = 12/209 (5%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
              RD++    ++S     V      D  +L V  +          +   + ++    FS
Sbjct: 48  LSHRDRVYTADQWS---NTVTVTDPVDNKLLGVINLGAPTPANLNPLYTGQLLVHGMGFS 104

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +    L+      ++    +D  +N  + +T        A Y+PD  + V+ + R G+ 
Sbjct: 105 PDHHTLLVVSIASNSVAF--IDTATNTVKHVTYVGRSPHEAFYTPDGKE-VWVTVR-GEN 160

Query: 327 QLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQER 384
            + V+      +K RI+          ++SP        + F+ E   I V       +R
Sbjct: 161 YVSVLDGATYQEKARITVANGPGMT--IFSPDDKYGYVCSSFTPETDVITVADHK-VIKR 217

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +            +P G+ + ++ K  G 
Sbjct: 218 IPQASPFCPNIAATPDGKQVWYTLKDTGR 246


>gi|303323975|ref|XP_003071975.1| WD domain, G-beta repeat containing protein [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240111685|gb|EER29830.1| WD domain, G-beta repeat containing protein [Coccidioides posadasii
           C735 delta SOWgp]
          Length = 515

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/272 (15%), Positives = 86/272 (31%), Gaps = 52/272 (19%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G   ++  + D D     +        +    +SPN + +A  + D+     V 
Sbjct: 158 SSRMATGSGDSTARIWDCDTGTPIHTLKGHSSWVLAVSWSPNDKILATGSMDN----TVR 213

Query: 241 LMDTRIDRA-PKRIGNFRSMILAPRFSS----N-GKRALISVQKDEAMDIYSVDLQSNAT 294
           L D +  +A    +      I++  +      + G+  L S  KD  + I+ V +     
Sbjct: 214 LWDPKTGQALGAPLKGHTKWIMSLAWEPYHLQDPGRPRLASASKDSTVRIWDV-VSKRIE 272

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------------ 342
             LT          +    +  ++ S  +   +++    +GS  + +S            
Sbjct: 273 NVLTGHKGSISCVRWG--GTARIYTSSHDKTIKIWN-PKDGSLIQTLSSHTHRVNHLALS 329

Query: 343 -----QDKEASYFDPVWSPQGDLIAFTKFS------------------GEKFAIGVMKKD 379
                +     +  PV     D IA  K                     + F + +    
Sbjct: 330 TDFFLRTSFYEHNTPVPDSDTDRIALAKRRFEKAATINGKLTERLVSASDDFTMFLWDPA 389

Query: 380 GSQE---RLLVEDSNLQAPTWSPSGRSLIFSR 408
            S +   R+L     +   T+SP G  +  + 
Sbjct: 390 SSNKPISRMLGHQKEVNHVTFSPDGAYIASAS 421



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 57/139 (41%), Gaps = 9/139 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           ++E +VS     ++ + D   +N          + +    FSP+   +A A++D+     
Sbjct: 370 LTERLVSASDDFTMFLWDPASSNKPISRMLGHQKEVNHVTFSPDGAYIASASFDN----H 425

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
           V L + R  +    +      +    FS++  R L+S  KD  + ++  D+++      L
Sbjct: 426 VKLWNARDGKFMTSLRGHVGAVYQCCFSAD-SRLLVSSSKDTTLKVW--DVRTGKLAMDL 482

Query: 298 TNTLFINISASYSPDSSQI 316
                   +  +SPD  ++
Sbjct: 483 PGHQDEVYAVDWSPDGEKV 501



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 43/316 (13%), Positives = 86/316 (27%), Gaps = 70/316 (22%)

Query: 111 LVTGRVIKE----GKDRLRVEFRLWDVKDRKQIIG------------------------- 141
           ++               +    RLWD K  + +                           
Sbjct: 191 VLAVSWSPNDKILATGSMDNTVRLWDPKTGQALGAPLKGHTKWIMSLAWEPYHLQDPGRP 250

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DG 200
           +   +S  S  +I   +S  I   +TG KG  +      +  + +     ++ + +  DG
Sbjct: 251 RLASASKDSTVRIWDVVSKRIENVLTGHKGSISCVRWGGTARIYTSSHDKTIKIWNPKDG 310

Query: 201 ANIRYLTPSRDQILF-----------------EPRFSPNQQKVAYATYDDEDILRV---- 239
           + I+ L+    ++                    P    +  ++A A    E    +    
Sbjct: 311 SLIQTLSSHTHRVNHLALSTDFFLRTSFYEHNTPVPDSDTDRIALAKRRFEKAATINGKL 370

Query: 240 -------------YLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                        +L D      P  R+   +  +    FS +G     S   D  + ++
Sbjct: 371 TERLVSASDDFTMFLWDPASSNKPISRMLGHQKEVNHVTFSPDGAYIA-SASFDNHVKLW 429

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           +          L   +       +S DS  +V  S       L V               
Sbjct: 430 NA-RDGKFMTSLRGHVGAVYQCCFSADSRLLVSSSK---DTTLKVWDVRTGKLAMDLPGH 485

Query: 346 EASYFDPVWSPQGDLI 361
           +   +   WSP G+ +
Sbjct: 486 QDEVYAVDWSPDGEKV 501


>gi|239612332|gb|EEQ89319.1| periodic tryptophan protein 2 [Ajellomyces dermatitidis ER-3]
          Length = 917

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 75/211 (35%), Gaps = 16/211 (7%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + + +A+ +     +L V+   +      K+ G+  SM     +S +G++  I+   D 
Sbjct: 304 NSGEWIAFGSSKFGQLL-VWEWQSE-SYILKQQGHLDSMNSL-VYSPDGQKI-ITAADDG 359

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + ++  +         T       +  +S   + ++F +  +G  + + +     + + 
Sbjct: 360 KIKVWDTN-SGFCIVTFTEHTSGVTACQFSKKGN-VLFTASLDGSIRAWDL-IRYRNFRT 416

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWS 398
            +     ++      P G+++         F + +      Q   RL      + + +++
Sbjct: 417 FTAPSRLAFSCLAVDPSGEVVCAGSLD--SFDVHIWSVQTGQLLDRLAGHQGPVSSLSFA 474

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             G  L+      G     +    + GR +T
Sbjct: 475 ADGSHLV-----SGSWDHTIRIWSIFGRTQT 500



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 62/195 (31%), Gaps = 9/195 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ QK+  A  D +    + + DT             S + A +FS  G   L +   
Sbjct: 345 YSPDGQKIITAADDGK----IKVWDTNSGFCIVTFTEHTSGVTACQFSKKGN-VLFTASL 399

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++       T    +  S   + D S  V  +       +++        
Sbjct: 400 DGSIRAWDL-IRYRNFRTFTAPSRLAFS-CLAVDPSGEVVCAGSLDSFDVHIWSVQTGQL 457

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                  +       ++  G  +    +      I  +         L   ++L +  + 
Sbjct: 458 LDRLAGHQGPVSSLSFAADGSHLVSGSWDHT-IRIWSIFGRTQTSEPLELQADLLSVAFR 516

Query: 399 PSGRSLIFSRKKDGD 413
           P G+ +  +   DG 
Sbjct: 517 PDGKQIA-ASTLDGQ 530


>gi|195356407|ref|XP_002044665.1| GM22467 [Drosophila sechellia]
 gi|194133246|gb|EDW54762.1| GM22467 [Drosophila sechellia]
          Length = 466

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 5/106 (4%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  ++ D + +   S   G   + + Q +      + +          WSP  D + F 
Sbjct: 235 TSMQWNKDGTHLATASI--GDRSIIIWQPDTGMMHPLKRLGPPGSLLK-WSPDNDWL-FA 290

Query: 365 KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
                 F +    +  + ER +      +Q   WSP GR L+F   
Sbjct: 291 ATVDRVFRVWNCHQQWTTERWVCGPGGYVQTACWSPCGRFLLFVSS 336


>gi|118405102|ref|NP_001072540.1| notchless homolog 1 [Xenopus (Silurana) tropicalis]
 gi|115292058|gb|AAI22041.1| notchless homolog 1 [Xenopus (Silurana) tropicalis]
          Length = 476

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 64/176 (36%), Gaps = 22/176 (12%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           + R    +      +++  FS  GK    S   D  +  + ++ ++       +T +I +
Sbjct: 94  VTRCTSSLEGHTEAVISVAFSPTGKYLA-SGSGDTTVRFWDLNTETPHFTSKGHTHWI-L 151

Query: 306 SASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQ--KRISQDKEASYFDP----VWSPQ 357
           S ++SPD  ++       G    Q+++   N   Q  K ++   +   +        +P+
Sbjct: 152 SIAWSPDGRKLA-----SGCKNSQIFIWDPNTGKQIGKPLTGHSKWITWLCWEPLHLNPE 206

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +A          I +      Q +  L     ++ A  W   G  L++S  +D
Sbjct: 207 CRYLASASKDCT---IRIWDTVMGQCQKILTSHTQSVTAVKWGGDG--LLYSSSQD 257



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 12/141 (8%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + +++   +    +R+T    +     +SPD+  I   S     + +
Sbjct: 331 GPERLVSGSDDFTLFLWAPAEEKKPLQRMTGHQALINEVLFSPDTRIIASASF---DKSV 387

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   ++ +   WS    L+  +  S     +     D   ++LLV+
Sbjct: 388 KLWDGKTGKFLASLRGHVSAVYQIAWSADSRLLV-SGSSDSTLKVW----DSKTKKLLVD 442

Query: 389 --DSNLQAPT--WSPSGRSLI 405
                 +  +  WSP G+ + 
Sbjct: 443 LPGHADEVYSVDWSPDGQRVA 463



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 10/110 (9%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            A  R T++L  +  A    ++SP    +   S   G   +     N       S+    
Sbjct: 92  RAVTRCTSSLEGHTEAVISVAFSPTGKYLASGS---GDTTVRFWDLNTETPHFTSKGHTH 148

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 WSP G  +A      +   I +   +  ++       + +  TW
Sbjct: 149 WILSIAWSPDGRKLA---SGCKNSQIFIWDPNTGKQIGKPLTGHSKWITW 195



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 67/207 (32%), Gaps = 44/207 (21%)

Query: 75  RSDVFNLISQDSFKQKITN------PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           R+  FN        Q ++         ++ R+ +    G + LV+G              
Sbjct: 293 RTGAFNPADASVNPQDMSGSLEDLKEKALKRYNEVRGQGPERLVSGS--------DDFTL 344

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            LW   + K+ +           R   H     I + +       ++RI+  +    S  
Sbjct: 345 FLWAPAEEKKPL----------QRMTGHQA--LINEVLFSP----DTRIIASASFDKSVK 388

Query: 189 IKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           +         DG   ++L         +++  +S + + +   + D      + + D++ 
Sbjct: 389 L--------WDGKTGKFLASLRGHVSAVYQIAWSADSRLLVSGSSDS----TLKVWDSKT 436

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +    +      + +  +S +G+R  
Sbjct: 437 KKLLVDLPGHADEVYSVDWSPDGQRVA 463



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 47/353 (13%), Positives = 98/353 (27%), Gaps = 111/353 (31%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------------------ 227
           SG    ++   D +     + +      +    +SP+ +K+A                  
Sbjct: 122 SGSGDTTVRFWDLNTETPHFTSKGHTHWILSIAWSPDGRKLASGCKNSQIFIWDPNTGKQ 181

Query: 228 ---------------------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                                      Y     +D   + + DT + +  K + +    +
Sbjct: 182 IGKPLTGHSKWITWLCWEPLHLNPECRYLASASKDC-TIRIWDTVMGQCQKILTSHTQSV 240

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-------------------LTNTL 301
            A ++  +G   L S  +D  +  +    Q     R                   L    
Sbjct: 241 TAVKWGGDG--LLYSSSQDRTIKAWR--AQDGVLCRTLQGHAHWVNTMALSTDYVLRTGA 296

Query: 302 FINISASYSP--------DSSQIV---FESDREGKEQ------------LYVMQSNGSDQ 338
           F    AS +P        D  +     +   R    +            L+         
Sbjct: 297 FNPADASVNPQDMSGSLEDLKEKALKRYNEVRGQGPERLVSGSDDFTLFLWAPAEEKKPL 356

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--- 395
           +R++   +A   + ++SP   +IA   F  +   +     DG   + L       +    
Sbjct: 357 QRMT-GHQALINEVLFSPDTRIIASASFD-KSVKLW----DGKTGKFLASLRGHVSAVYQ 410

Query: 396 -TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVG 444
             WS   R L+       D+  K++    +   + L++ P +A +     W  
Sbjct: 411 IAWSADSRLLV---SGSSDSTLKVWD---SKTKKLLVDLPGHADEVYSVDWSP 457


>gi|301776474|ref|XP_002923664.1| PREDICTED: notchless protein homolog 1-like [Ailuropoda
           melanoleuca]
          Length = 542

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 60/176 (34%), Gaps = 22/176 (12%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 104 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCQGHRHW 159

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVW-----SPQ 357
            +S S+SPD  ++     + G  Q+ +   + G    R             W     +P+
Sbjct: 160 VLSISWSPDGKKLA-SGCKSG--QILLWDPSTGKQVGRALAGHSKWITGLSWEPLHANPE 216

Query: 358 GDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
              +A +   G    + V     G  ER+L     ++    W   G  L++S  +D
Sbjct: 217 CRYVASSSKDGS---VRVWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 267



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 56/179 (31%), Gaps = 10/179 (5%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 341 GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASF---DKSV 397

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 398 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLATDLPGH 456

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY---SIDLNGRNETLINTPAYASDPQWVG 444
              + A  WSP G+ +        D   +++   ++         +  P  +  P W  
Sbjct: 457 ADEVYAVDWSPDGQRVA---SGGKDRCLRIWDPHALPSPSAQMEEVRNPKVSGTPAWTC 512



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/177 (10%), Positives = 50/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      +    +    + 
Sbjct: 132 SGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLA---SGCKSGQILLWDPST 188

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ ++           LT  
Sbjct: 189 GKQVGRALAGHSKWITGLSWEPLHANPECRYVA-SSSKDGSVRVWDT-TAGRCERILTGH 246

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 247 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 299



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 66/214 (30%), Gaps = 35/214 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +         LV G+   +           LW  
Sbjct: 303 RTGAFEPAEASVNAQDLQGSLQELKDRALKRYN---LVRGQGPERLVSGSDDFTLFLWSP 359

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+  +    S  +    
Sbjct: 360 AEDKKPLA----------RMTGHQA--LINQVLFSP----DSRIVASASFDKSVKL---- 399

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
                DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 400 ----WDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAT 451

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +      + A  +S +G+R   S  KD  + I+
Sbjct: 452 DLPGHADEVYAVDWSPDGQRVA-SGGKDRCLRIW 484


>gi|298247305|ref|ZP_06971110.1| 40-residue YVTN family beta-propeller repeat protein [Ktedonobacter
           racemifer DSM 44963]
 gi|297549964|gb|EFH83830.1| 40-residue YVTN family beta-propeller repeat protein [Ktedonobacter
           racemifer DSM 44963]
          Length = 889

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 76/231 (32%), Gaps = 20/231 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--RFSSNGKRALISVQ 277
           SP+ + +         I  + ++ T+ ++  + +  +    +     +S +GK    S  
Sbjct: 85  SPDGRYLLVVNSGAG-IQSLQVISTKDNKVIQSVPYYAPHSVFVGLAYSPDGKHVYASGG 143

Query: 278 KDEAMDIYSV----DLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVM 331
            ++ +  +SV     L S     +            S SPD   +   ++      + V+
Sbjct: 144 GEDVVHTFSVLPNGVLSSTGDVVIGTLRANPFPTGLSVSPDGKTLYVANNLA--NTISVV 201

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DS 390
            +         +     Y   V S  G  I  + +      + V+       +  +    
Sbjct: 202 DTATKVVTSTIKIGGYPYTTLV-SNDGKTIYASNW--GDATLSVIDASSKTVKATIGVGQ 258

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYASDP 440
           +  A  +SP G  L +    + D  S    +D N   E   I+   YA  P
Sbjct: 259 HPTAMVFSPDGERL-YVTDANSDAVS---VVDTNSYKEVRRISVSPYAKAP 305



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 59/219 (26%), Gaps = 20/219 (9%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            D     +             +G+     L    S +G+  L+         +  +  + 
Sbjct: 54  HDGKTQLINNWTITPAGKQLPLGDLP---LNSVLSPDGRYLLVVNSGAGIQSLQVISTKD 110

Query: 292 NATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNG-----SDQKRISQ 343
           N   +       +   +  +YSPD   +      E     + +  NG      D    + 
Sbjct: 111 NKVIQSVPYYAPHSVFVGLAYSPDGKHVYASGGGEDVVHTFSVLPNGVLSSTGDVVIGTL 170

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGR 402
                      SP G  +           I V+          ++       T  S  G+
Sbjct: 171 RANPFPTGLSVSPDGKTLYVANNLANT--ISVVDTATKVVTSTIKIGGYPYTTLVSNDGK 228

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           ++ ++      T S +     +  ++T+  T      P 
Sbjct: 229 TI-YASNWGDATLSVI-----DASSKTVKATIGVGQHPT 261



 Score = 36.5 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 58/157 (36%), Gaps = 15/157 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + + YA+   +  L V    ++  +A   +G       A  FS +G+R  ++    
Sbjct: 224 SNDGKTI-YASNWGDATLSVIDASSKTVKATIGVGQHP---TAMVFSPDGERLYVTDANS 279

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISASYSPDS------SQIVFESDREGKEQLYVMQ 332
           +A+    VD  S     R++ + +     S SP+        + ++  D  G  ++ V+ 
Sbjct: 280 DAVS--VVDTNSYKEVRRISVSPYAKAPLSSSPEGLAITPNGKTLYVVD-AGNNEVVVLN 336

Query: 333 SNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSG 368
               D   + +   A Y      S     +  T   G
Sbjct: 337 LKDDDSAVLGRIPTAWYPTSVNVSRDSGTLYVTNGKG 373


>gi|228471175|ref|ZP_04055988.1| DPP IV [Porphyromonas uenonis 60-3]
 gi|228306990|gb|EEK16072.1| DPP IV [Porphyromonas uenonis 60-3]
          Length = 721

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 52/335 (15%), Positives = 107/335 (31%), Gaps = 36/335 (10%)

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR-KIAHTISDDIYQSITGE----KGDF 173
               R+    R  ++  +K     +   +    R ++ +  +D +Y+         +   
Sbjct: 146 SPDGRMVAFVRDNNIFIKKFDFNSEVQVTTEGKRNEVINGTTDWVYEEEFSTTRLMEWSP 205

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            S  L    S  S +   S+ +   D     Y+             S     +     D 
Sbjct: 206 QSDFLAFVRSDESQVKAYSMPIYGDDLYPTDYVYKYPKVGEQNSTVS-----LHLYNLDL 260

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA-MDIYSVDLQSN 292
           +   RV L        P+ +       LA           +++ + +  + +Y ++ +S 
Sbjct: 261 KRTDRVDLPLDADGYIPRIVFTGWGSDLA----------AVTINRLQNDLKVYRINPKSR 310

Query: 293 ATE--------RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
                      R  N  FIN S  + PD   IV  S+R+G  QLY   +NG+ QKR++Q 
Sbjct: 311 TPRLTLREQDPRYINNEFIN-SMRFVPDG--IVMLSERDGSTQLYKYGTNGALQKRLTQG 367

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRS 403
                       +G+ + +           V+K     +  +L  ++ +   +++     
Sbjct: 368 NWDIINFYGCDSEGN-VYYQAADQTPTQRRVLKTTPRGKTTVLAGEAGINRASFTQD--Y 424

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             F           + +I      + +      A 
Sbjct: 425 SYFINSYSNAKTPAITTIRTTKEGKVIRTLEDNAQ 459



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 73/278 (26%), Gaps = 63/278 (22%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--RSMILAPRFSSNGKRALISV 276
            +P+   +   T       R Y +        + +        I+ P FS +G+      
Sbjct: 97  IAPSGHHILIYTDIKPIYRRSYTLRATHYDVRRNLCEPLTEGDIMIPTFSPDGRMVAFVR 156

Query: 277 QKD------EAMDIYSVDLQSNATERL--TNTLFINISAS------YSPDSSQIVFESDR 322
             +      +      V  +    E +  T         S      +SP S  + F    
Sbjct: 157 DNNIFIKKFDFNSEVQVTTEGKRNEVINGTTDWVYEEEFSTTRLMEWSPQSDFLAFVRSD 216

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS----------------------PQGD- 359
           E + + Y M   G D        +        S                        G  
Sbjct: 217 ESQVKAYSMPIYGDDLYPTDYVYKYPKVGEQNSTVSLHLYNLDLKRTDRVDLPLDADGYI 276

Query: 360 -LIAFTKFSG-----------EKFAIGVMKKDGSQERLLVEDSN--------LQAPTWSP 399
             I FT +                 +  +       RL + + +        + +  + P
Sbjct: 277 PRIVFTGWGSDLAAVTINRLQNDLKVYRINPKSRTPRLTLREQDPRYINNEFINSMRFVP 336

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            G  ++   ++DG T  +LY    NG  +  +    + 
Sbjct: 337 DG--IVMLSERDGST--QLYKYGTNGALQKRLTQGNWD 370



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 49/160 (30%), Gaps = 29/160 (18%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-------FDPVWSPQGDLI-A 362
           PD       SD    +++   +           D   +        +D   +P G  I  
Sbjct: 49  PDGKHYTLISD--DYQRIVKYEYATGRAVDTLFDIAKARECDIKAIWDYDIAPSGHHILI 106

Query: 363 FTKFSGEKFAIGVMKKDGSQERL-----LVEDSNLQAPTWSPSGRSLIFSRKKD-----G 412
           +T           ++      R      L E  ++  PT+SP GR + F R  +      
Sbjct: 107 YTDIKPIYRRSYTLRATHYDVRRNLCEPLTE-GDIMIPTFSPDGRMVAFVRDNNIFIKKF 165

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASD--------PQWVG 444
           D  S++       RNE +  T  +  +         +W  
Sbjct: 166 DFNSEVQVTTEGKRNEVINGTTDWVYEEEFSTTRLMEWSP 205


>gi|170690047|ref|ZP_02881214.1| 40-residue YVTN family beta-propeller repeat protein [Burkholderia
           graminis C4D1M]
 gi|170144482|gb|EDT12643.1| 40-residue YVTN family beta-propeller repeat protein [Burkholderia
           graminis C4D1M]
          Length = 379

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 70/197 (35%), Gaps = 21/197 (10%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           ++    + ++D +  R  + + +         FS +GK  L++ + D+ + +Y    ++ 
Sbjct: 167 NKPPAEIAIVDMKSWRVVRSVTSGHETEGI-EFSRDGKNMLVTNEGDDTVSVY--HARTG 223

Query: 293 ATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           A  R T  L           SPD    V   +     +L V+ +     K+ + D +   
Sbjct: 224 APVR-TVKLAAGGRPRGIRLSPDGKDYVVTLES--LSKLVVIDARTFKVKK-TVDTKLGP 279

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIF 406
           +   + P G  +       +   +     DG     L +          +++P G  L+ 
Sbjct: 280 YGVAYGPDGKRLFVAAARDKTVQVF----DGKSYEHLADVPVGQRCWHFSFTPDGTKLLV 335

Query: 407 SRKKDGDTGSKLYSIDL 423
           +  +       +Y +D 
Sbjct: 336 ACGRS----DAVYVLDA 348



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 56/143 (39%), Gaps = 12/143 (8%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           R GA +R +  +        R SP+ +         E + ++ ++D R  +  K +    
Sbjct: 221 RTGAPVRTVKLAAGGRPRGIRLSPDGKDYVVT---LESLSKLVVIDARTFKVKKTVDTKL 277

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQ 315
                  +  +GKR  ++  +D+ + ++       + E L +          S++PD ++
Sbjct: 278 GP-YGVAYGPDGKRLFVAAARDKTVQVF----DGKSYEHLADVPVGQRCWHFSFTPDGTK 332

Query: 316 IVFESDREGKEQLYVMQSNGSDQ 338
           ++    R   + +YV+ +     
Sbjct: 333 LLVACGRS--DAVYVLDARSYQP 353


>gi|159466384|ref|XP_001691389.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158279361|gb|EDP05122.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 304

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 70/198 (35%), Gaps = 17/198 (8%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRA-LISVQKDEAMDIYSVDLQSNATER 296
           ++        +R+G       +PR   +S +G     +      A+  ++  ++S     
Sbjct: 29  VIHAWDHATARRVGTLGGYSPSPRHVSYSPDGNLLAAVYTDGSAAVWDWAEGVKSTHMPL 88

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---- 352
           L+ +      A +SPD   +   +   G  + + ++      +++ +    +   P    
Sbjct: 89  LSKSSAA-RHACFSPDGQLLA-LACANGTVRTWHLKQLDPLHQQLLEGAGGAAGSPVRAL 146

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRK 409
            +SP G L+A T        +      G   +      +  A     +SP G+ L     
Sbjct: 147 AFSPSGLLLA-TAGDDGDVCLWNTNTRGQWTQTACLQGHAYAVNALAFSPCGQVLA---S 202

Query: 410 KDGDTGSKLYSIDLNGRN 427
              ++  +L+   ++GR 
Sbjct: 203 GGNESAVRLWDATISGRR 220



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 59/194 (30%), Gaps = 13/194 (6%)

Query: 198 RDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D A  R +              +SP+   +A    D    +  +    +    P  + +
Sbjct: 33  WDHATARRVGTLGGYSPSPRHVSYSPDGNLLAAVYTDGSAAVWDWAEGVKSTHMP--LLS 90

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSP 311
             S      FS +G+   ++         +   L     + L        S     ++SP
Sbjct: 91  KSSAARHACFSPDGQLLALACANGTVRTWHLKQLDPLHQQLLEGAGGAAGSPVRALAFSP 150

Query: 312 DSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
               +    D +G   L+   + G   Q    Q    +     +SP G ++A     G +
Sbjct: 151 SGLLLATAGD-DGDVCLWNTNTRGQWTQTACLQGHAYAVNALAFSPCGQVLA---SGGNE 206

Query: 371 FAIGVMKKDGSQER 384
            A+ +     S  R
Sbjct: 207 SAVRLWDATISGRR 220


>gi|150400047|ref|YP_001323814.1| Pyrrolo-quinoline quinone [Methanococcus vannielii SB]
 gi|150012750|gb|ABR55202.1| Pyrrolo-quinoline quinone [Methanococcus vannielii SB]
          Length = 324

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/279 (14%), Positives = 82/279 (29%), Gaps = 64/279 (22%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     L  ++ DG  I +   S + I  +P    +   + + +     +          
Sbjct: 36  GSSDKCLYAVNPDGT-IHWSFKSGEVIECKPLIGKDG-TIYFGSDKVYAVSPKGAKKWIF 93

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                 + +F                L     D    +Y+++       R      I  +
Sbjct: 94  KTEKAILSDFTIFN----------NVLYVSSLDGN--LYAINPDGTEKWRFKTGKSIYST 141

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSD----------QKRISQDKEASYFDP---- 352
                D + I F S+    E LY +  +G++            +++  K+ + +      
Sbjct: 142 PVVYNDGT-IYFGSN---DEHLYAINPDGTEKWRFKTNDSVVSQVTIGKDGTIYFGSDKV 197

Query: 353 -VWSPQGD---------------------LIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
              +P G                       I  T   G  +AI     DG+++       
Sbjct: 198 YAVNPDGTEKWNFYAGYWVVSKPAISNDESIYVTSLDGNLYAI---NPDGTEKWRFSTKK 254

Query: 391 NLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            +++ P     G  + F     G     LY+I+ +G  +
Sbjct: 255 RIESSPAIGKDGT-IYF-----GSYDGNLYAINPDGTKK 287



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 74/209 (35%), Gaps = 19/209 (9%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                K  +++ +++   ++  G     L  ++ DG   ++   + D ++ +     +  
Sbjct: 131 RFKTGKSIYSTPVVYNDGTIYFGSNDEHLYAINPDGT-EKWRFKTNDSVVSQVTIGKDGT 189

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
                        +VY ++            +  ++  P  S++   ++     D    +
Sbjct: 190 IYF-------GSDKVYAVNPDGTEKWNFYAGYW-VVSKPAISND--ESIYVTSLDGN--L 237

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           Y+++       R +    I  S +   D + I F S  +G   LY +  +G+ +     +
Sbjct: 238 YAINPDGTEKWRFSTKKRIESSPAIGKDGT-IYFGSY-DGN--LYAINPDGTKKWNFDTE 293

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                  PV    G  I F   +G+ +A+
Sbjct: 294 -NWIVSSPVIDEDGT-IYFGSRNGKLYAL 320


>gi|146301300|ref|YP_001195891.1| peptidase S9 prolyl oligopeptidase [Flavobacterium johnsoniae
           UW101]
 gi|146155718|gb|ABQ06572.1| peptidase family S9, prolyl oligopeptidase active site domain
           protein [Flavobacterium johnsoniae UW101]
          Length = 870

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 48/126 (38%), Gaps = 23/126 (18%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            D+Y +DL++   + +     ++   S SPD + + +        Q ++          +
Sbjct: 371 FDLYIMDLKNGNRKPVIMNYTMDEKPSGSPDGAHLCYAK----NGQWWIYSIMEDTHTCL 426

Query: 342 SQDKEASYFDPV--------------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + D   S+F                 W+  G++I +     +K+ +  +  DG  ++ L 
Sbjct: 427 TIDLPNSFFAEDNNRPSENPSYGIGGWTTDGEIILY-----DKYDLWKISLDGKIKKRLT 481

Query: 388 EDSNLQ 393
           +   +Q
Sbjct: 482 QGREMQ 487



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 74/200 (37%), Gaps = 36/200 (18%)

Query: 167 TGEKGDFNSRILFVSESVVSG------IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           T +K  F+ R    +                 + + DR  +N    T      +++P   
Sbjct: 302 TKDKLLFDYRKYLSNPKTSDKMAVWNMQDNTVIQITDRKFSNGFLSTDYNSAFIYDP--- 358

Query: 221 PNQQKVAYATYDDED-ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                +AY     +     +Y+MD +       I N+ +M   P  S +G     +  K+
Sbjct: 359 -----IAYEPQSKQFCPFDLYIMDLKNGNRKPVIMNY-TMDEKPSGSPDGAHLCYA--KN 410

Query: 280 EAMDIYSV--DLQSNATERLTNTLFINIS--AS---------YSPDSSQIVFESDREGKE 326
               IYS+  D  +  T  L N+ F   +   S         ++ D   I+++     K 
Sbjct: 411 GQWWIYSIMEDTHTCLTIDLPNSFFAEDNNRPSENPSYGIGGWTTDGEIILYD-----KY 465

Query: 327 QLYVMQSNGSDQKRISQDKE 346
            L+ +  +G  +KR++Q +E
Sbjct: 466 DLWKISLDGKIKKRLTQGRE 485



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 52/154 (33%), Gaps = 35/154 (22%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           N+ FI    +Y P S Q            LY+M     ++K +  +       P  SP G
Sbjct: 351 NSAFIYDPIAYEPQSKQFC-------PFDLYIMDLKNGNRKPVIMN-YTMDEKPSGSPDG 402

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV-----------EDSNLQAPT-----WSPSGR 402
             + + K    ++ I  + +D      L             +   + P+     W+  G 
Sbjct: 403 AHLCYAK--NGQWWIYSIMEDT--HTCLTIDLPNSFFAEDNNRPSENPSYGIGGWTTDGE 458

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            +++ +         L+ I L+G+ +  +     
Sbjct: 459 IILYDKY-------DLWKISLDGKIKKRLTQGRE 485


>gi|94536819|ref|NP_001005805.1| WD repeat-containing protein 61 [Gallus gallus]
 gi|82233784|sp|Q5ZJH5|WDR61_CHICK RecName: Full=WD repeat-containing protein 61
 gi|53133578|emb|CAG32118.1| hypothetical protein RCJMB04_18b20 [Gallus gallus]
          Length = 305

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  ++  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 113 AFSPDSQFLATGSHVGK----VNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 168 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 223

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 224 LAGTLSGHGSWVLNVAFCPD 243



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 84/268 (31%), Gaps = 43/268 (16%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           TG +       L    RLWD++  KQI  K   + P                        
Sbjct: 75  TGSI--AASSSLDAHIRLWDLETGKQI--KSIDAGPVD-----------------AWSLA 113

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F+    F++    +G     + +   +     Y   +R + +    +SP+ + +A    D
Sbjct: 114 FSPDSQFLA----TGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAID 169

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DL 289
                 + + D    +    +      I +  FS +  + L++   D  + IY V   +L
Sbjct: 170 G----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKIYDVQHANL 224

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                  L+      ++ ++ PD +           + + V  +          D +   
Sbjct: 225 AGT----LSGHGSWVLNVAFCPDDTHF---VSSSSDKSVKVWDAGTRTCVHTFFDHQDQV 277

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +   ++  G  I      G+   I +  
Sbjct: 278 WGVKYNGSGSKIVSV---GDDQEIHIYD 302



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 57/200 (28%), Gaps = 12/200 (6%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           ++++        +     S      A ++ D      + L D    +  K I        
Sbjct: 55  DLQWTLEGHQLGVVSVDISHTGSIAASSSLD----AHIRLWDLETGKQIKSIDAGPVDAW 110

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFES 320
           +  FS + +    +      ++I+ V+        L T   FI +S +YSPD   +    
Sbjct: 111 SLAFSPDSQFLA-TGSHVGKVNIFGVE-TGKKEYSLDTRGKFI-LSIAYSPDGKYLA--- 164

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + +            +          +SP   L+      G      V   + 
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224

Query: 381 SQERLLVEDSNLQAPTWSPS 400
           +   L    S +    + P 
Sbjct: 225 AG-TLSGHGSWVLNVAFCPD 243


>gi|296486295|gb|DAA28408.1| WD repeat-containing protein 1 [Bos taurus]
          Length = 606

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 78/257 (30%), Gaps = 55/257 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + + D   I  +       +   +++P+   +A  + D    LR++    +       
Sbjct: 40  VILRNIDNPAIADIYTEHAHQVVVAKYAPSGFYIA--SGDVSGKLRIWDTTQKEHLLKYE 97

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK--------------------DEAMDIYSVDLQSN 292
              F   I    ++ + KR  +  +                          I SVD++ +
Sbjct: 98  YQPFAGKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQS 157

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RL      N +A +             EG    +    +         D        
Sbjct: 158 RPYRLVTGSDDNCAAFF-------------EGPPFKFKFTIS---------DHGRFVNCV 195

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFS 407
            +SP G+  A     G    I +      ++          D  + A +WSP    L+  
Sbjct: 196 RFSPDGNRFATASADG---QIFIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTRLL-- 250

Query: 408 RKKDGDTGSKLYSIDLN 424
               GD  SK++ +++N
Sbjct: 251 -SASGDKTSKIWDVNVN 266



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 58/383 (15%), Positives = 116/383 (30%), Gaps = 66/383 (17%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS++V  D + +       +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVSKIVGGDPKGNSFLYTNGKCVILRNIDNPAIADIYTE----HAHQVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 65  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIA--------------- 109

Query: 171 GDFNSRILFVSESVVSGIIKNSLC-----VMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
              +S+ + V            L      V +  G N   +  S D     P        
Sbjct: 110 WTEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHN--KVINSVDIKQSRP-------- 159

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
             Y      D       +    +    I +    +   RFS +G R   +   D    I+
Sbjct: 160 --YRLVTGSDDNCAAFFEGPPFKFKFTISDHGRFVNCVRFSPDGNRFA-TASADG--QIF 214

Query: 286 SVDLQSNATE-RLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             D ++      L  +   +      S+SPDS++++  S  +   +++ +  N S     
Sbjct: 215 IYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTRLLSASG-DKTSKIWDVNVN-SVVNTF 272

Query: 342 SQDKEASY--FDPVWSPQ-------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +            +W             I +   +     + V+K      + L    N 
Sbjct: 273 TMGSNVLDQQLGCLWQKDHLLSISLSGYINYLDKNNPSKPLRVIKGHSKSIQCLTVHKNG 332

Query: 393 QAPTWSPSGRSLIFSRKKDGDTG 415
                   G+S I+S   DG   
Sbjct: 333 --------GKSYIYSGSHDGHIN 347


>gi|328766601|gb|EGF76654.1| hypothetical protein BATDEDRAFT_28217 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 918

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 77/252 (30%), Gaps = 38/252 (15%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--- 254
            DG + + +       +    + P +Q +A       D + ++ + +      + +G   
Sbjct: 104 ADGLHEQLIINKGKGPVVGLAWHPFKQTIAIIH--RNDSVHLFDLTSETWCPRQAVGLHH 161

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            F+  I    +   G   L    K                 RL      ++  + S    
Sbjct: 162 EFQRGITGIAWCPTGSAVLAVGCKSGVC-----------LWRL----QFDVHPTTSTKRL 206

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             +  +D +G  Q ++          +S           WSP G  I     +     + 
Sbjct: 207 HPLIPADAQGCPQAWMTLLRAPQLSHVSH--------FAWSPDGRYIVAGSSANSTLVVF 258

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNGRNETLIN 432
            +  + S+   L      +   +S  G  L+ S K+ G     ++L+       N  L+ 
Sbjct: 259 DVATESSEALSLSGGPTHEL-KFSSDGMFLLQSFKRGGIRIWETQLW-------NSVLLC 310

Query: 433 TPAYASDPQWVG 444
           T   A    W+ 
Sbjct: 311 TKRPAHSLTWLP 322


>gi|311897105|dbj|BAJ29513.1| hypothetical protein KSE_37110 [Kitasatospora setae KM-6054]
          Length = 382

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/246 (12%), Positives = 72/246 (29%), Gaps = 77/246 (31%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY--- 309
           +F +++    +S +GK A      D   ++ + D        +            ++   
Sbjct: 136 DFGTIVRDLAWSPDGKHAAFI---DGNGNLQTADPDGTHKTLVAKAPTGTTWSHPTWQVF 192

Query: 310 --SPDSSQIV--------FESDREGKEQLYVMQSNG-SDQKRISQDKEASY--------- 349
             + D  +++        F ++  G  +L  + + G ++   +S  + A           
Sbjct: 193 VPNADDQRMLLKPKNNLQFTANDHGTLRLLTIPATGATNPTELSLGQYAGEDEKPNPTTG 252

Query: 350 ----------------------------------------FDPVWSPQGDLIAFTKFSGE 369
                                                     P  S     + F +    
Sbjct: 253 NQWANVAGRVGTSVYANKDDGQVYIRDEYLRQNGGPIAKGSQPDLSDDNHELVFVRSVNG 312

Query: 370 KFAIGVMKKDGSQERL-LVEDSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              +    ++ +   + L  ++ +    P +SP G+++ F R  DG      Y+I   G 
Sbjct: 313 HDHLFTQDQNTNANAVDLTPNATVDYTQPAFSPDGKTIAF-RGPDGT-----YTIPTKGG 366

Query: 427 NETLIN 432
             T ++
Sbjct: 367 TPTKVS 372



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 5/86 (5%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              S D+ ++VF     G + L+    N + +   ++ +    Y  P +SP G  IAF  
Sbjct: 295 PDLSDDNHELVFVRSVNGHDHLFTQDQNTNANAVDLTPNATVDYTQPAFSPDGKTIAFRG 354

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSN 391
             G       +   G     + + + 
Sbjct: 355 PDGT----YTIPTKGGTPTKVSDTTG 376


>gi|302529438|ref|ZP_07281780.1| YVTN beta-propeller repeat-containing protein [Streptomyces sp.
           AA4]
 gi|302438333|gb|EFL10149.1| YVTN beta-propeller repeat-containing protein [Streptomyces sp.
           AA4]
          Length = 912

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 54/161 (33%), Gaps = 33/161 (20%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--------NTL 301
            +R+      I++   S +G     ++  D  + +  VDL+S   ++L            
Sbjct: 73  GERLVLPNGKIMSSTVSPDGSHLA-ALTTDGGIALTIVDLKSWKVQQLVGKDKKADLQLP 131

Query: 302 FINI---SASYSPDSSQIV---------FESDREG---KEQLYVMQSNGSDQKRISQDKE 346
             ++     SYSPD   +          F  + +G         + ++GS          
Sbjct: 132 GNDVGQEGPSYSPDGKTLWLGQIDGYRKFTVNPDGTVANPTFVPIPADGSKHSL------ 185

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                 ++S  G  + ++  +G+   + +    G  ++   
Sbjct: 186 --AAGAIFSADGSTV-YSAVNGQNRVVAIDAASGQIKQSWT 223



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 19/108 (17%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV------------EDSNL 392
                     SP G  +A     G   A+ ++     + + LV             D   
Sbjct: 79  PNGKIMSSTVSPDGSHLAALTTDGG-IALTIVDLKSWKVQQLVGKDKKADLQLPGNDVGQ 137

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR--NETLINTPAYAS 438
           + P++SP G++L +  + DG      ++++ +G   N T +  PA  S
Sbjct: 138 EGPSYSPDGKTL-WLGQIDGYRK---FTVNPDGTVANPTFVPIPADGS 181



 Score = 37.7 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 31/93 (33%), Gaps = 5/93 (5%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAP 263
            P  D     P +SP+ + +     D      V    T  +     I   G+  S+    
Sbjct: 130 LPGNDVGQEGPSYSPDGKTLWLGQIDGYRKFTVNPDGTVANPTFVPIPADGSKHSLAAGA 189

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            FS++G         +    + ++D  S   ++
Sbjct: 190 IFSADGSTVY--SAVNGQNRVVAIDAASGQIKQ 220


>gi|145512720|ref|XP_001442276.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409549|emb|CAK74879.1| unnamed protein product [Paramecium tetraurelia]
          Length = 811

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 37/94 (39%), Gaps = 7/94 (7%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N  +        +    FSP+   +A  + D      + L D +  +   R+     +I 
Sbjct: 675 NDLHSLNGHSSNVQSVNFSPDGTTLASGSSDK----SIRLWDVKTGQQKARLDGHLGIIY 730

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +  FS +G     S   D+++ ++  D+++   +
Sbjct: 731 SVNFSPDGTTLA-SGSDDKSIRLW--DVKTGQQK 761



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 7/88 (7%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSP 311
           +    S + +  FS +G     S   D+++ ++  D+++   + RL   L I  S ++SP
Sbjct: 680 LNGHSSNVQSVNFSPDGTTLA-SGSSDKSIRLW--DVKTGQQKARLDGHLGIIYSVNFSP 736

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQK 339
           D + +   SD    + + +       QK
Sbjct: 737 DGTTLASGSD---DKSIRLWDVKTGQQK 761


>gi|221134016|ref|ZP_03560321.1| peptidase S9 prolyl oligopeptidase [Glaciecola sp. HTCC2999]
          Length = 707

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 15/98 (15%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEK--------------FAIGVMK-KDGSQERLLVEDSN 391
           A+  +   SP G + A+T                    F I  +    G   + +    +
Sbjct: 50  ANAGNITVSPDGSVTAYTVSKPRNLKAGDDNGSPDTHLFVIRTVNGIQGEPVQFIGTQGS 109

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           + A T+S  G+ + F  K+DGD  + LYSI L G   T
Sbjct: 110 VSALTFSGDGQHIFFKSKRDGDENTSLYSIALAGGEAT 147



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 71/262 (27%), Gaps = 50/262 (19%)

Query: 218 RFSPNQQKVAYATYDDEDI------------LRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             SP+    AY      ++            L V      I   P +    +  + A  F
Sbjct: 56  TVSPDGSVTAYTVSKPRNLKAGDDNGSPDTHLFVIRTVNGIQGEPVQFIGTQGSVSALTF 115

Query: 266 SSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFES 320
           S +G+      ++D      +YS+ L        T     + S    + S D + + F +
Sbjct: 116 SGDGQHIFFKSKRDGDENTSLYSIALAGGEA---TKRFEYDTSIGDYAVSDDGNTLYFVA 172

Query: 321 DREGKE--------------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             + +                      L+ +  N  D +           +   S  G  
Sbjct: 173 RPKDETPDLSKKGFAAYAYEEDVRLASLWQVALNEKDAQATVLLDGGHVSNFELSNDGKH 232

Query: 361 IAFTKFSGEKFAIGVMKKD--------GSQERLLVEDSNLQAPTWSPSGRSLIFS--RKK 410
           I             +M++D        G  ++ +     L A  +S   + L F      
Sbjct: 233 ITAAVAPTNLVDDSLMRRDLVILETATGKVKQHIDIPGKLGAFEFSDDDKHLAFLAGTDV 292

Query: 411 DGDTGSKLYSIDLNGRNETLIN 432
                  L+    N    T + 
Sbjct: 293 HDTATGVLFIAKTNSNEFTRLT 314


>gi|57618968|ref|NP_001009838.1| dipeptidyl peptidase 4 [Felis catus]
 gi|22001581|sp|Q9N2I7|DPP4_FELCA RecName: Full=Dipeptidyl peptidase 4; AltName: Full=Dipeptidyl
           peptidase IV; Short=DPP IV; AltName: Full=T-cell
           activation antigen CD26; AltName: CD_antigen=CD26;
           Contains: RecName: Full=Dipeptidyl peptidase 4 membrane
           form; AltName: Full=Dipeptidyl peptidase IV membrane
           form; Contains: RecName: Full=Dipeptidyl peptidase 4
           soluble form; AltName: Full=Dipeptidyl peptidase IV
           soluble form
 gi|7209837|dbj|BAA92344.1| dipeptidyl peptidase IV [Felis catus]
          Length = 765

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 28/134 (20%)

Query: 264 RFSSNGKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFI--NISA-SYSPDSSQIV 317
             S +G+  L+      +       S D+      +L     I  N    ++SP+  ++ 
Sbjct: 105 SVSPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEEKIPNNTQWITWSPEGHKLA 164

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEAS------------------YFDPVWSPQGD 359
           +      K  +YV     S   RI+   E +                  Y    WSP+G 
Sbjct: 165 YV----WKNDVYVKNEPNSSSHRITWTGEENAIYNGIADWVYEEEIFSAYSALWWSPKGT 220

Query: 360 LIAFTKFSGEKFAI 373
            +A+ +F+  +  +
Sbjct: 221 FLAYAQFNDTQVPL 234


>gi|58261992|ref|XP_568406.1| hypothetical protein CNM01130 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134118333|ref|XP_772180.1| hypothetical protein CNBM1000 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50254788|gb|EAL17533.1| hypothetical protein CNBM1000 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57230579|gb|AAW46889.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 338

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/273 (15%), Positives = 95/273 (34%), Gaps = 34/273 (12%)

Query: 193 LCVMDRDGANIRYLTPSRD----QILFEPRF--------SPNQQKVAYATYDDEDILRVY 240
           LC    D   IR+          QI   P++        SPN+   AY        +R++
Sbjct: 33  LCTAGYD-HTIRFWEAWSGICYRQITLSPQWKQVNRLAISPNK---AYVAAAGNGTVRIW 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + +  +     +      ++A  +S+ GK  + +  +D  + ++  D ++  T+R+   
Sbjct: 89  DIQSLSNTPIATLEGHTGNVVALAYSALGKWIV-TGSEDGTVKVW--DTRTAQTQRIYLH 145

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                     P+  +++   D+ G  +++ +  N    + +  D++        S  G+ 
Sbjct: 146 DCPVNDVVIHPNQGELISC-DQSGSVKIWDLAENTCTHELV-PDEDVPIRSVSISSDGNT 203

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW------SPSGRSLIFSRKKDGDT 414
           +      G  +   ++    +   L+   S      +      SP  + L        D 
Sbjct: 204 LVAANDGGMVYVWRIIPVPNANANLVPVTSFRAHTKYITRCLLSPDTKYLA---TCSADH 260

Query: 415 GSKLYS---IDLNGRNETLINTPAYASDPQWVG 444
             K++S   ID     +TL     +  D  +  
Sbjct: 261 TVKIWSTAGIDYT-LEKTLTGHQRWVWDAAFSA 292


>gi|328772358|gb|EGF82396.1| hypothetical protein BATDEDRAFT_86622 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 734

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/255 (16%), Positives = 83/255 (32%), Gaps = 14/255 (5%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VV+G    SL + D + A +              +F P  +  A  + D      V L D
Sbjct: 109 VVAGSSSGSLKLWDLEHAKVIRTLSGHRSSATSVQFHPFGEFFASGSSD----CTVRLWD 164

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R     +     ++ I     + +G+    SV  D  + I+ +         ++ +   
Sbjct: 165 VRRKGCIQTYSGHKNSIDYLEITPDGRWIA-SVDTDGVVKIWDM-TAGKLLHTISGSSES 222

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S S+SP    +   S  +G   +Y       +    S  K        +S  G  +A 
Sbjct: 223 VASLSFSPSEFILA-TSSLDGNFHIY--DLQNFECISSSFQKLNGVSKISFSGDGHTLAT 279

Query: 364 TKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +      F I        S        SN+    +     S+I    +   +  ++++ID
Sbjct: 280 SSV--GTFDIWKWDRPQQSPMSFASGWSNIVDFKFLSDTNSIIACSVEQ--SFVEVWAID 335

Query: 423 LNGRNETLINTPAYA 437
           +    +    + A +
Sbjct: 336 ITASPKGRKGSAAQS 350



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 47/152 (30%), Gaps = 10/152 (6%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
             +++     ++ ++  DL+     R L+       S  + P        S       + 
Sbjct: 107 ELVVAGSSSGSLKLW--DLEHAKVIRTLSGHRSSATSVQFHPFGEFFASGSS---DCTVR 161

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +         +     + S      +P G  IA     G    I  M        +    
Sbjct: 162 LWDVRRKGCIQTYSGHKNSIDYLEITPDGRWIASVDTDG-VVKIWDMTAGKLLHTISGSS 220

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            ++ + ++SP    ++ +   DG+    +Y +
Sbjct: 221 ESVASLSFSP-SEFILATSSLDGNF--HIYDL 249


>gi|322701227|gb|EFY92977.1| WD-repeat protein, putative [Metarhizium acridum CQMa 102]
          Length = 327

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 71/192 (36%), Gaps = 22/192 (11%)

Query: 180 VSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +   + SG    ++ V D   G  IR L+ S D +L    FS +  ++A A+        
Sbjct: 144 IGHRIASGSSDKTIRVWDAKTGDEIRKLSWSGDYVLSL-AFSHDGSRLATAS----SSCI 198

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL-------ISVQKDEAMDIYSVDLQS 291
           + + D +     +++      + +  FS  G           I +  DE  +  SVD   
Sbjct: 199 IVVWDYKKGEVTQKLRGHTDCVTSVAFSPQGPYLASCSQGSTIQLWYDELGERTSVDEAE 258

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            A + L +      + +   D  + V  +  +G   L+    +G   KR+ +     + D
Sbjct: 259 KAADSLPSHAHRICALTVFLDG-RFVASAMTDGTIHLW----DGETGKRLRRAGRMGHHD 313

Query: 352 PV----WSPQGD 359
            V    +S  G 
Sbjct: 314 RVNSIGFSHDGQ 325



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 67/214 (31%), Gaps = 31/214 (14%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                 ++ +    F P   ++A  + D      + + D +     +++      +L+  
Sbjct: 127 QTLEGHEEAIRCVAFFPIGHRIASGSSDK----TIRVWDAKTGDEIRKLSWSGDYVLSLA 182

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G R   +     +  I   D +     + L        S ++SP    +   S   
Sbjct: 183 FSHDGSRLATASS---SCIIVVWDYKKGEVTQKLRGHTDCVTSVAFSPQGPYLASCSQ-- 237

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP---------QGDLIAFTKFSGEKFAIG 374
               + +      ++  + + ++A+   P  +           G  +A +  +     + 
Sbjct: 238 -GSTIQLWYDELGERTSVDEAEKAADSLPSHAHRICALTVFLDGRFVA-SAMTDGTIHLW 295

Query: 375 VMKKDGSQERLLVEDSNL------QAPTWSPSGR 402
               DG   + L     +       +  +S  G+
Sbjct: 296 ----DGETGKRLRRAGRMGHHDRVNSIGFSHDGQ 325


>gi|241895546|ref|ZP_04782842.1| carboxy-cis,cis-muconate cyclase [Weissella paramesenteroides ATCC
           33313]
 gi|241871124|gb|EER74875.1| carboxy-cis,cis-muconate cyclase [Weissella paramesenteroides ATCC
           33313]
          Length = 341

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/175 (14%), Positives = 59/175 (33%), Gaps = 20/175 (11%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           + +   D   +  V    T     P+ I          RFS +G+ A +  +    + + 
Sbjct: 166 LTFDVSDSGKLKLVATFTTEAGFGPRHI----------RFSPDGQYAYLLGELSSKLSVL 215

Query: 286 SVDLQSNAT---ERLTNTLFINIS----ASYSPDSSQIVFESDREGKE-QLYVMQSNGSD 337
             +   + T     L      +      A Y  +  + ++ S+R      ++ ++ NG+ 
Sbjct: 216 KYNADGSFTLLQTVLMIPEDWDAHNGGAAIYVSNDGRFIYTSNRGHNSIAVFAVKENGAT 275

Query: 338 QKRISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            + I        F   +  SP    +     + +  ++     +  + RL+ +D 
Sbjct: 276 VEHIQWISTEGDFPRDFALSPDEKFLVAANQNTDNVSVYARDSETGKLRLVQKDF 330


>gi|23476937|emb|CAC87723.1| aminopeptidase C [Aspergillus niger]
          Length = 663

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 54/163 (33%), Gaps = 21/163 (12%)

Query: 211 DQILFEPRF--SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRF 265
           D+ ++   F   P + ++ +A  +D     V      I+   K++            P F
Sbjct: 122 DEKIWYAAFNSHPKRPELVFAIREDHHGKEVVNELVVINTGNKKVEVAATGADFYSHPTF 181

Query: 266 SSNGKRALISVQKDE-----AMDIYSVDLQS---NATERLTNTLFINIS---ASYSPDSS 314
           S  G R                +++S   +        +L        S     + PD +
Sbjct: 182 SPAGDRVSWIQWNHPEMPWTGTELFSAPWKDEKVGTPVKL-AGNGEEESILQPRWGPDGT 240

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKR---ISQDKEASYFDPVW 354
              F SDR G  Q Y    + SD+ R   I   ++  +  P W
Sbjct: 241 LF-FVSDRTGYWQFYRWSPDESDEPRAIVIEGLEKGEFAHPEW 282



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 9/128 (7%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           ++F       G    +  V+   G     +  +       P FSP   +V++  ++  ++
Sbjct: 139 LVFAIREDHHGKEVVNELVVINTGNKKVEVAATGADFYSHPTFSPAGDRVSWIQWNHPEM 198

Query: 237 L-------RVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                        D ++    K  GN     IL PR+  +G        +      Y   
Sbjct: 199 PWTGTELFSAPWKDEKVGTPVKLAGNGEEESILQPRWGPDGT-LFFVSDRTGYWQFYRWS 257

Query: 289 LQSNATER 296
              +   R
Sbjct: 258 PDESDEPR 265


>gi|87308742|ref|ZP_01090881.1| X-Pro dipeptidyl-peptidase [Blastopirellula marina DSM 3645]
 gi|87288453|gb|EAQ80348.1| X-Pro dipeptidyl-peptidase [Blastopirellula marina DSM 3645]
          Length = 1516

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 45/317 (14%), Positives = 88/317 (27%), Gaps = 61/317 (19%)

Query: 153 KIAHTISDDIYQSITGE------KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           K AH  +    +  T        +G    R         + I    + + D D  +   L
Sbjct: 215 KAAHDATTVNIEKQTRPTRDRRARGSRAPRDRSPDGVWSAAIRDGDVILRDVDSGDETSL 274

Query: 207 TPSRD--QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-----IGNFRSM 259
           T   D        ++SP+ Q +        D   VY +++      +      +      
Sbjct: 275 TSDGDEQSPYGHLQWSPDSQSLIALKITPGDRGEVYRVESSPTGGGRARLHTHLYPLPGD 334

Query: 260 ILA--------------------------PRFSSNGKRALI--SVQKDEAMDIYSVDLQS 291
             A                          PR    G         +  +   +  V+L++
Sbjct: 335 KFAAHQLHLFDIPNKQEIACDADIIDFGVPRLRFRGDTVTYEQVDRGHQRFRLVEVNLRT 394

Query: 292 NATERL----------TNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
                L          T     I +         ++++ S+++G   LY+  +   + K 
Sbjct: 395 GGVRNLIDEKSSTFLWTAHPEAIGVRRVTWLAGDELIYCSEQDGWRHLYLYDAKSGELKN 454

Query: 341 ISQDKEASYFDPVWSPQG-DLIAF------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                +          +    I F      T           +  DG+    L   +   
Sbjct: 455 PITRGDWVVRAIDRVDEAARQIWFRASGMNTGQDPYLVHFYRINFDGTGLTALTAANGNH 514

Query: 394 APTWSPSGRSLI--FSR 408
             T+SP+G+ L+  +SR
Sbjct: 515 TITYSPTGKYLLDRYSR 531



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 41/106 (38%), Gaps = 13/106 (12%)

Query: 336 SDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             Q R ++D+    S      SP G   A  +       + +   D   E  L  D + Q
Sbjct: 226 EKQTRPTRDRRARGSRAPRDRSPDGVWSAAIRDGD----VILRDVDSGDETSLTSDGDEQ 281

Query: 394 APT----WSPSGRSLIFSRKKDGDTGSKLYSI--DLNGRNETLINT 433
           +P     WSP  +SLI  +   GD G ++Y +     G     ++T
Sbjct: 282 SPYGHLQWSPDSQSLIALKITPGDRG-EVYRVESSPTGGGRARLHT 326


>gi|114564462|ref|YP_751976.1| peptidase S9 prolyl oligopeptidase [Shewanella frigidimarina NCIMB
           400]
 gi|114335755|gb|ABI73137.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella frigidimarina NCIMB 400]
          Length = 829

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 78/221 (35%), Gaps = 13/221 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +Q  +A    ++              R  + + ++     A ++  +  + L+ ++  + 
Sbjct: 340 DQDVLASVKTENAKAQGKSYKSENAPRLVQLMQDWEWSQSAIQWHESDDKLLVMLEAVDN 399

Query: 282 MDIYS--VDLQSNATE---RLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQS 333
            D +   VDLQ        RL +  ++N + +   +   +  + + S+  G  QLY   +
Sbjct: 400 KDRWIASVDLQKGKLTTEHRLHDDAWVNYNFNQFGWITGTDNMYYLSEESGFSQLYTKTA 459

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSN 391
            G     ++  K     +   SP    + +         + +  ++    +   L +   
Sbjct: 460 AG-KVVALTNGKFV-VDNVTLSPDAKHLYYRANKDHPGSYNVYRVEIATGKTEQLTQWLG 517

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                 SP G+SL+ +         +LY   + G+   L +
Sbjct: 518 TLDYNLSPDGQSLLLTASSAVHPD-ELYIQPIGGKMSQLTH 557



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/244 (14%), Positives = 81/244 (33%), Gaps = 23/244 (9%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           GK + S   +  ++   + D  +     +  + + ++L + E+V +        +   D 
Sbjct: 356 GKSYKS--ENAPRLVQLMQDWEWSQSAIQWHESDDKLLVMLEAVDN----KDRWIASVDL 409

Query: 201 ANIRYLTPSRDQILFEPRFSPN------QQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
              +  T  R        ++ N           Y   ++    ++Y            + 
Sbjct: 410 QKGKLTTEHRLHDDAWVNYNFNQFGWITGTDNMYYLSEESGFSQLYTKTAA--GKVVALT 467

Query: 255 NFRSMILAPRFSSNGKRALISVQKD--EAMDIYSVDLQSNATERLTNTLF-INISASYSP 311
           N + ++     S + K       KD   + ++Y V++ +  TE+LT  L  ++   + SP
Sbjct: 468 NGKFVVDNVTLSPDAKHLYYRANKDHPGSYNVYRVEIATGKTEQLTQWLGTLDY--NLSP 525

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAFTKFSGEK 370
           D   ++  +          +Q  G    +++      +    W +P    I     S   
Sbjct: 526 DGQSLLLTASSAVHPDELYIQPIGGKMSQLTHYTSPEFTLYPWQTP---QIVTVPSSHGA 582

Query: 371 FAIG 374
             I 
Sbjct: 583 GNIY 586



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 33/103 (32%), Gaps = 10/103 (9%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             ++    W    D + +         +      G    L      +   T SP  + L 
Sbjct: 427 NYNFNQFGWITGTDNMYYLSEESGFSQLYTKTAAGKVVALTNGKFVVDNVTLSPDAKHLY 486

Query: 406 FSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVGFMD 447
           +   KD      +Y +++  G+ E L          QW+G +D
Sbjct: 487 YRANKDHPGSYNVYRVEIATGKTEQLT---------QWLGTLD 520


>gi|325191022|emb|CCA25505.1| transcription initiation factor TFIID subunit putati [Albugo
           laibachii Nc14]
          Length = 880

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 58/180 (32%), Gaps = 12/180 (6%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              + +    FS +  R  ++   D  + ++S+  QSN     +++ +      Y     
Sbjct: 598 GHSNAVYGSSFSPD-SRFALTSSADSTIRLWSLAAQSNVVVYRSHSGYPVWDVEYGHFGY 656

Query: 315 QIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                S DR  +    +  ++     RI     +      + P    IA           
Sbjct: 657 YFASCSMDRTAR----LWSTDHITPLRIYAGHLSDVECVRFHPNHHYIATGSSDKTVRLW 712

Query: 374 GVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            V    G   R+     + ++   +S +GR L        D    ++ +    R ETL+ 
Sbjct: 713 DVQS--GKCIRIFTGHFHGVKCLAFSRNGRYL---TSSGDDQYINIWDLQAGKRLETLVG 767


>gi|316976963|gb|EFV60148.1| WD repeat-containing protein 26 [Trichinella spiralis]
          Length = 490

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 53/145 (36%), Gaps = 10/145 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESD 321
           FS  GK    +  K+  + I+ V+L S +  +   L    F      +SP+   +     
Sbjct: 167 FSHAGKLLA-TGSKEGVIYIWDVNLSSRSVTKKFTLDGHSFGAAYFVFSPNDKYLACVGP 225

Query: 322 REGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +    L++  +     + +I+   + S     W P G  +      G K        +G
Sbjct: 226 ED-SPDLWIWDTETGILRIKITHSPDDSISCVSWHPDGTKVV---CGGTKGQFYQCDLEG 281

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI 405
           +      E   +++  +   GR+++
Sbjct: 282 TVVDSW-EGVRVRSIQYRKDGRTVL 305



 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 40/114 (35%), Gaps = 10/114 (8%)

Query: 186 SGIIKNSLCVMDRDGANI----RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +G  +  + + D + ++     ++             FSPN + +A      ED   +++
Sbjct: 176 TGSKEGVIYIWDVNLSSRSVTKKFTLDGHSFGAAYFVFSPNDKYLA--CVGPEDSPDLWI 233

Query: 242 MDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            DT       +I +     ++   +  +G + +    K      Y  DL+    
Sbjct: 234 WDTETGILRIKITHSPDDSISCVSWHPDGTKVVCGGTKG---QFYQCDLEGTVV 284


>gi|169795632|ref|YP_001713425.1| hypothetical protein ABAYE1524 [Acinetobacter baumannii AYE]
 gi|301346823|ref|ZP_07227564.1| hypothetical protein AbauAB0_11266 [Acinetobacter baumannii AB056]
 gi|301596530|ref|ZP_07241538.1| hypothetical protein AbauAB059_11967 [Acinetobacter baumannii
           AB059]
 gi|332850911|ref|ZP_08433064.1| hypothetical protein HMPREF0021_00635 [Acinetobacter baumannii
           6013150]
 gi|332871356|ref|ZP_08439900.1| hypothetical protein HMPREF0020_03555 [Acinetobacter baumannii
           6013113]
 gi|169148559|emb|CAM86425.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
 gi|332730346|gb|EGJ61668.1| hypothetical protein HMPREF0021_00635 [Acinetobacter baumannii
           6013150]
 gi|332731546|gb|EGJ62833.1| hypothetical protein HMPREF0020_03555 [Acinetobacter baumannii
           6013113]
          Length = 432

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 80/275 (29%), Gaps = 45/275 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF------ 256
              S          S + + +    Y+ +D        L         + + N       
Sbjct: 159 TVNSHGGHPTHASISLDGKFLFVSNYSAFDKGRGGVAVLPILPNGHLGEMVQNIVFAEGS 218

Query: 257 --------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-- 306
                        +  FS +GK    S   ++ +  +  +      + L      ++S  
Sbjct: 219 GHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYNPS--KPQPLEADKSRDVSFK 276

Query: 307 -------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------QDKEASYF 350
                    +SP+  Q    ++   + ++          K+++           +  S  
Sbjct: 277 HGSGPRHMVFSPNGKQAYITAEM--RSEIVTFNVQDGHLKKVAELKLVHEDKTPEFKSAS 334

Query: 351 DPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS--GRSLIF 406
             + SP G   IA  + +  K  +  ++++G   +  V  +N   P  +S    G+ L  
Sbjct: 335 GIILSPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGIEPRAFSFDESGKYLYV 394

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +          L+  D    +   +   A  S P 
Sbjct: 395 TNVYSN--NISLFRFDTKNGSLKPLGDAAKISTPT 427


>gi|145224972|ref|YP_001135650.1| peptidase S9 prolyl oligopeptidase [Mycobacterium gilvum PYR-GCK]
 gi|145217458|gb|ABP46862.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Mycobacterium gilvum PYR-GCK]
          Length = 626

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQ--APTWSPSGRSLIFSRK 409
            SP G  +AF   S  +  + V   D      R + +D N       W+   R LI+ + 
Sbjct: 23  ISPDGTRMAFLAPSNNRLNVWVENLDPESGGLRRVTDDDNRSVLHFEWTDDPRWLIYLQD 82

Query: 410 KDGDTGSKLYSIDLN 424
            +GD    ++ +DL+
Sbjct: 83  TNGDENWHVHRVDLD 97



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 30/77 (38%), Gaps = 4/77 (5%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSN--GSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           A  SPD +++ F +    +  ++V   +      +R++ D   S     W+     + + 
Sbjct: 21  AKISPDGTRMAFLAPSNNRLNVWVENLDPESGGLRRVTDDDNRSVLHFEWTDDPRWLIYL 80

Query: 365 KFSGE--KFAIGVMKKD 379
           + +     + +  +  D
Sbjct: 81  QDTNGDENWHVHRVDLD 97



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 63/207 (30%), Gaps = 25/207 (12%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           A + S +G R       +  ++++   +D +S    R+T+    ++    ++ D   +++
Sbjct: 20  AAKISPDGTRMAFLAPSNNRLNVWVENLDPESGGLRRVTDDDNRSVLHFEWTDDPRWLIY 79

Query: 319 ESDREG--KEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAI 373
             D  G     ++ +  +  +     ++    A          G               I
Sbjct: 80  LQDTNGDENWHVHRVDLDDPEAPAVDLTPFPGAMALPVREVKNGRTTVMVNNRDATLLDI 139

Query: 374 GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY---------SIDL 423
             +        L+     ++     S  G     +   DGD     +          I  
Sbjct: 140 HELDIATGDLTLIAKNPGHVNGWLSSDDGDLFATALTADGDLELSRWDRDDEALRPIIRF 199

Query: 424 NGRN-----ETLINTPAYASDPQWVGF 445
           +G +       L+ TP       W+GF
Sbjct: 200 DGTDYPIGIHPLVLTP--DGTGVWLGF 224


>gi|325279170|ref|YP_004251712.1| Dipeptidyl-peptidase IV [Odoribacter splanchnicus DSM 20712]
 gi|324310979|gb|ADY31532.1| Dipeptidyl-peptidase IV [Odoribacter splanchnicus DSM 20712]
          Length = 715

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 88/246 (35%), Gaps = 24/246 (9%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N + ++ +   I     +SP+ +++A+   D+  +    L+D        R   +    +
Sbjct: 178 NGQTVSRNEFGINGGIFWSPDGKQLAFYRKDESQVGTFPLLDINSRMGTLREIKYPMAGM 237

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES 320
                   ++  + V +  +     +D+      + LTN        ++SP S  I  + 
Sbjct: 238 ------KSEQISLGVYQVASGKTVFLDVDDFGREQYLTNI-------AWSPASDYIYVQV 284

Query: 321 -DREGK-EQLYVMQSNGSD-QKRISQDKEASYFDPVW------SPQGDLIAFTKFSGEKF 371
            DR  K  +L    +   +  K + +++   Y +P+       +     I  T      F
Sbjct: 285 LDRAQKHMKLNQYSAKTGEFVKTLLEEQNERYIEPLTPIVFLKNDPSRFIYRTNNRDGYF 344

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
           ++ + +    +    + D N          + + ++  +     + L+ +++ +G+   L
Sbjct: 345 SLYLCEAATGKVLKRLTDVNADVEMVGQDDKFVYYTSAEVSPVDNHLFRVEVKSGKKTRL 404

Query: 431 INTPAY 436
                +
Sbjct: 405 TQAEGW 410



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 61/214 (28%), Gaps = 52/214 (24%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--------- 318
           NG    ++  +D  +      +      R  N   IN    +SPD  Q+ F         
Sbjct: 162 NGNEFAVTSDEDPNI------VNGQTVSR--NEFGINGGIFWSPDGKQLAFYRKDESQVG 213

Query: 319 ------ESDREGKEQLYVMQSNGSDQKRIS------------------QDKEASYFDPVW 354
                  + R G  +       G   ++IS                    +E    +  W
Sbjct: 214 TFPLLDINSRMGTLREIKYPMAGMKSEQISLGVYQVASGKTVFLDVDDFGREQYLTNIAW 273

Query: 355 SPQGDLIA--FTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQ--AP----TWSPS--GRS 403
           SP  D I       + +   +        +  + L+E+ N +   P     +  +   R 
Sbjct: 274 SPASDYIYVQVLDRAQKHMKLNQYSAKTGEFVKTLLEEQNERYIEPLTPIVFLKNDPSRF 333

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           +  +  +DG     L         + L +  A  
Sbjct: 334 IYRTNNRDGYFSLYLCEAATGKVLKRLTDVNADV 367


>gi|323446983|gb|EGB02964.1| hypothetical protein AURANDRAFT_68407 [Aureococcus anophagefferens]
          Length = 654

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 73/215 (33%), Gaps = 15/215 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           AN   L P R       + + N ++ +       D   ++L     ++ P  +  F +  
Sbjct: 191 ANAHVLGPDRWVAGLWAQQARNARRTSEVRAAAPDAGGLFLWRNGDEKPPPCVATFANPA 250

Query: 261 ---LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQI 316
               A   S +G R            ++ +D        L      ++S  ++SP     
Sbjct: 251 CDFWAASASRSGTRVAC---GGSDRKVHVLDGD-GNERALLAGHGDDVSLVAFSPSREHH 306

Query: 317 VFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +    R  +G    ++   + +++       E    D  W+P G+  A    +       
Sbjct: 307 LLSVARRGDGGSDAFLFDVDTAEKLAAYDVPEGFVCDARWAPDGERFALALGAASV---- 362

Query: 375 VMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           V   DG S  RL   D    A  +S  G SL+ +R
Sbjct: 363 VFAGDGSSNARLATVDGGAAAVCFSADGASLLAAR 397


>gi|303271479|ref|XP_003055101.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463075|gb|EEH60353.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 596

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 76/223 (34%), Gaps = 17/223 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           K  +  +   G          D+ + + +F+ +  +   +++D +    + L DT   + 
Sbjct: 329 KIKIWDVHNSGK-CMRTYLGHDKAIKDIQFNNDGTRFISSSWDKK----LKLWDTETGKV 383

Query: 250 PKRIGNFRSMILAPRFSSN--GKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINIS 306
            + + + + +  A +   +   +  L++ Q D    I   D+ S    +     L    +
Sbjct: 384 IRTLTSGK-IAYAVKMHPDEDKQNILMAAQSD--KKILQYDMNSGDVVQEYDQHLGAVNT 440

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            ++  +  +    SD +   +++      +  K I+     S      SP G+ IA    
Sbjct: 441 ITFCDEGRRFATTSD-DKSLRVWEFGIPVT-MKYIADPSMHSMPAVTASPNGNWIACQSL 498

Query: 367 SGEKFAIGVMKKDGSQERLLVED----SNLQAPTWSPSGRSLI 405
             +        K    ++                +SP GR ++
Sbjct: 499 DNQIMIYSTKDKFRLNKKKRFTGHSNAGYACQVNFSPDGRFIM 541


>gi|156847202|ref|XP_001646486.1| hypothetical protein Kpol_1048p59 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117163|gb|EDO18628.1| hypothetical protein Kpol_1048p59 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 850

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/270 (14%), Positives = 84/270 (31%), Gaps = 35/270 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEP------RFSPNQQKVAYATYDDEDILRV 239
           SG   + + +   DG    Y     D++   P       F  +   V   ++   D   +
Sbjct: 535 SGFQDSYIKIWSLDG----YPLSENDEMPNNPISSTCKTFIGHSGTVYSTSFSAGDEYLL 590

Query: 240 -----YLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                  +     +  K + +++     +    FS +      +   D+   ++S D   
Sbjct: 591 SASEDKTVRLWSVQDDKPLVSYKGHEKPVWDVEFSPSCNNLFATASNDQTARLWSCDRVY 650

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               R+      ++       + + +F    +   +++    N  D  R+     ++   
Sbjct: 651 --PLRVMAGHLNDVDCVSFHSNGRYIFTGSSDKTVRMW--DINTGDSVRLFMGHNSTVTS 706

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN----LQAPTWSPSGRSLIFS 407
              SP G  I+     G    I +    GS  +L     +    + + +++P G  L+  
Sbjct: 707 LSVSPDGKWISTGSDDG---IITIWDI-GSGRKLKNMRGHGKSSIHSLSYNPEGTLLV-- 760

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               G     +   DLN        TP   
Sbjct: 761 ---SGGADQSVRVWDLNKGTFEPSLTPEEV 787


>gi|156034665|ref|XP_001585751.1| hypothetical protein SS1G_13267 [Sclerotinia sclerotiorum 1980]
 gi|154698671|gb|EDN98409.1| hypothetical protein SS1G_13267 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 420

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 56/170 (32%), Gaps = 12/170 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +++     + + + R+SPN + +A  + D      + + D +  +  + +    + +
Sbjct: 111 YKCKFILRGHRKGVAQVRYSPNGRWIASCSADG----TIKIWDAQTGKHLRTMEGHLAGV 166

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVF 318
               +S +      S   D+ + ++  D  +       L        S ++SP  + I  
Sbjct: 167 STIAWSPDSNTIA-SGSDDKVIRLW--DRATGKPYLTPLLGHHNYVYSVAFSPKGNVIAS 223

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S     E +++       Q R             +   G L+      G
Sbjct: 224 GSY---DEAVFLWDLRARRQMRSLPAHSDPVGAVDFIRDGTLVCSCSTDG 270



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 16/136 (11%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            YSP+   I   S       + +  +      R  +   A      WSP  + IA     
Sbjct: 128 RYSPNGRWIASCS---ADGTIKIWDAQTGKHLRTMEGHLAGVSTIAWSPDSNTIASGSDD 184

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                I +  +   +  L     +     +  +SP G  +       G     ++  DL 
Sbjct: 185 K---VIRLWDRATGKPYLTPLLGHHNYVYSVAFSPKGNVIA-----SGSYDEAVFLWDLR 236

Query: 425 GRNETLINTPAYASDP 440
            R +   + PA+ SDP
Sbjct: 237 ARRQMR-SLPAH-SDP 250



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 28/231 (12%), Positives = 66/231 (28%), Gaps = 18/231 (7%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             KG    R       + S     ++ + D                +    +SP+   +A
Sbjct: 120 HRKGVAQVRYSPNGRWIASCSADGTIKIWDAQTGKHLRTMEGHLAGVSTIAWSPDSNTIA 179

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             + D   ++R++   T        +G+  + + +  FS  G     S   DEA+ ++ +
Sbjct: 180 SGSDD--KVIRLWDRATGKPYLTPLLGHH-NYVYSVAFSPKGNVIA-SGSYDEAVFLWDL 235

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIV------------FESDREGKEQLYVMQSNG 335
             +      L        +  +  D + +             F +       +     + 
Sbjct: 236 RAR-RQMRSLPAHSDPVGAVDFIRDGTLVCSCSTDGLIGNQGFINSGSEDGDILFWDVST 294

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-MKKDGSQERL 385
            +  +     +        +P  +    +        I V +  +G   RL
Sbjct: 295 KELIQKVHGHDGVVCWVDTAPGPNGAVVSGGLDGTVRIWVDVGDEGGAARL 345


>gi|149412006|ref|XP_001505254.1| PREDICTED: similar to WD repeat domain 17 [Ornithorhynchus
           anatinus]
          Length = 1179

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/197 (13%), Positives = 70/197 (35%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +       +P  + +++   ++P +   +A AT  +      ++ D 
Sbjct: 407 TASFDGTIKVWDINTLTAVSTSPGNEGVIYSLSWAPGDLNCIAGATSRNG----AFIWDI 462

Query: 245 RIDRAPKRIGNF-RSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +   R     ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 463 QKGKMITRFTEHAKNGIFCISWSHKDSKRIA-TCNGDGFCIIRTID--GKILHKY-KHPA 518

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++ ++  ++     A  F   WSP  + I 
Sbjct: 519 AVFGCDWSQNNKDMLATGCEDKNVRVYYLATSSAEPLKVFSGHTAKVFHVRWSPLREGIL 578

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 579 CSGSDDGTVRIWDYTQD 595


>gi|126329500|ref|XP_001376467.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 449

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 71/197 (36%), Gaps = 15/197 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +   +         +++V+ ++        +I    + ++A  +S +G+  L + + 
Sbjct: 56  WSADSLFIL-CAMYKRGLVQVWSLEQPEWHC--KIDEGSAGLVASCWSPDGRHILNTTEF 112

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++S  L + +   +          S++ D   +     R+ K+ + +   +    
Sbjct: 113 HLRITVWS--LCTKSVSYIKYPKACQQGISFTKDGRYMALAERRDCKDFISLFVCSDWQL 170

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--- 395
            R             W+P G ++A    S  ++ + +   DG   RLL   S  +     
Sbjct: 171 LRHFDTDTQDLAGIEWAPNGCVLA-AWDSCLEYKVLLYSLDG---RLLSTYSAYEWSLGI 226

Query: 396 ---TWSPSGRSLIFSRK 409
               WSPS + L     
Sbjct: 227 KTIAWSPSSQFLAIGSY 243



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 55/166 (33%), Gaps = 9/166 (5%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F+      +FS NGK     VQ      +   D+ +    +L   L       +S DS  
Sbjct: 7   FKLSNQLSKFSPNGKFLASCVQ----YRLVVRDVSTLQVLQLYTCLDQIQHLEWSADSLF 62

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           I+    + G  Q++ ++    +      +  A      WSP G  I     +     I V
Sbjct: 63  ILCAMYKRGLVQVWSLEQP--EWHCKIDEGSAGLVASCWSPDGRHIL--NTTEFHLRITV 118

Query: 376 MKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                     +       Q  +++  GR +  + ++D      L+ 
Sbjct: 119 WSLCTKSVSYIKYPKACQQGISFTKDGRYMALAERRDCKDFISLFV 164


>gi|19114472|ref|NP_593560.1| actin cortical patch component Aip1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|3183388|sp|O14301|YE85_SCHPO RecName: Full=Uncharacterized WD repeat-containing protein C9G1.05
 gi|2370553|emb|CAB11489.1| actin cortical patch component Aip1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 595

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 46/293 (15%), Positives = 89/293 (30%), Gaps = 41/293 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS----------SPASWRKIA-------- 155
           G  +  G ++  V  R+WD     +I+  +  +             S R IA        
Sbjct: 70  GYYVASGDNQGNV--RIWDCAGEDKILKNQVTAISGRITDLDWDGDSQRIIAVGEGKERY 127

Query: 156 -HTISDDIYQSITGEKGDFNSRILFV-----SESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            H  + D   S+    G  +                +    NS+                
Sbjct: 128 GHAFTADSGNSVGEIFGHSSVVNAVSLRKSRPFRAATASDDNSINFFHGTPYRFNRSLRV 187

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
             + +++ R+SPN ++ A A  D +    VY+ D +       I   +  I +  +S + 
Sbjct: 188 HSKFVYDVRYSPNDERFASAGADGK----VYVFDGKTGDQVYEIDAHKGSIFSISWSPDS 243

Query: 270 KRALISVQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            +  ++     +  I+  D  + +  R  L++     +   +      IV  S    K  
Sbjct: 244 SQ-FVTSSAGYSCKIW--DANTGSLIREWLSSDKKQLVGTVWPTKDLIIVVNS----KGN 296

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKK 378
           L  +  +           + S      SP         + G    + IG  K 
Sbjct: 297 LTYLNPSDCKVIDTIYGHQRSITAATLSPDATHFYTASYDGTVLSWDIGKQKA 349


>gi|254584566|ref|XP_002497851.1| ZYRO0F14960p [Zygosaccharomyces rouxii]
 gi|238940744|emb|CAR28918.1| ZYRO0F14960p [Zygosaccharomyces rouxii]
          Length = 319

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 73/198 (36%), Gaps = 21/198 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +F+PN + +A       D + VY ++T        +      I    +S +G+    +  
Sbjct: 22  KFAPNGKSIA---IGIGDHVLVYDLETPPLPPRIVLTQHSKPISEICWSPDGQCIATAS- 77

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             +   +    L      RL +     +S +++P  + ++  S  +   +++ +  NGS 
Sbjct: 78  --DDFTVGITHLSYGPLHRLVSHTAPVVSLAFNPKGN-LLCSSSMDESIKIWDV-LNGSL 133

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPT 396
            + I+   E+     +      +++   + G    I V         + L  D + Q+ T
Sbjct: 134 MRTIAAHSESVVSVDIPQLDSTILSSGSYDG---LIRVFDMASGHCLKTLTYDKDWQSET 190

Query: 397 ---------WSPSGRSLI 405
                    +S + R L+
Sbjct: 191 GVVPISQVKFSQNARYLL 208



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 94/257 (36%), Gaps = 34/257 (13%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +     + + E  +SP+ Q +A A+ D         +         R+ +  + +++
Sbjct: 50  PRIVLTQHSKPISEICWSPDGQCIATASDDF-----TVGITHLSYGPLHRLVSHTAPVVS 104

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             F+  G   L S   DE++ I+ V L  +    +       +S       S I+     
Sbjct: 105 LAFNPKGN-LLCSSSMDESIKIWDV-LNGSLMRTIAAHSESVVSVDIPQLDSTILSSGSY 162

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPV-------WSPQGDLIAFTKFSG------- 368
           +G  +++ M ++G   K ++ DK+      V       +S     +      G       
Sbjct: 163 DGLIRVFDM-ASGHCLKTLTYDKDWQSETGVVPISQVKFSQNARYLLVKSLDGIVKIWDC 221

Query: 369 -EKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRS-LIFSRKKDGDTGSKLYSIDLN 424
                +   K + SQER L     +    P+    G + ++ S  +DG    K+Y  +  
Sbjct: 222 IRGDVVRTFKIEPSQERQLQRSCGMDFLYPS---DGSAPIVVSGYEDG----KIYCWNSA 274

Query: 425 GRN-ETLINTPAYASDP 440
            +    LI+   ++ +P
Sbjct: 275 TKKLLQLIDGETHSGNP 291


>gi|296810094|ref|XP_002845385.1| TupA protein [Arthroderma otae CBS 113480]
 gi|238842773|gb|EEQ32435.1| TupA protein [Arthroderma otae CBS 113480]
          Length = 591

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 70/223 (31%), Gaps = 26/223 (11%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +    + DI RV  +D   +          S++   RFS++GK                 
Sbjct: 262 WYAVFNPDIPRVLDVDLVHNLI------HDSVVCCVRFSADGKHVA----TGCNRSAQIF 311

Query: 288 DLQSNATERLTNTLFIN-------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           ++ +           ++        S  +SPD   +   ++    +Q+ V        K 
Sbjct: 312 EVSTGLLVSTLQDDSVDKDGDLYIRSVCFSPDGRYLATGAE---DKQIRVWDIASRTIKN 368

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           I    E   +   ++  G  IA            ++  DG QE +L  +  +     SP 
Sbjct: 369 IFSGHEQDIYSLDFARNGRYIASGSGDKTVRLWDIV--DGKQELILSIEDGVTTVAISPD 426

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           GR +        D   +++     G     + +P    D  + 
Sbjct: 427 GRYVAAGSL---DKSVRVWDT-TTGYLVERLESPDGHRDSVYS 465



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 68/220 (30%), Gaps = 20/220 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    D  +    FSP+ + +A    D     ++ + D                I +  
Sbjct: 326 SVDKDGDLYIRSVCFSPDGRYLATGAEDK----QIRVWDIASRTIKNIFSGHEQDIYSLD 381

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F+ NG+    S   D+ + ++ + +       L+    +  + + SPD   +   S  + 
Sbjct: 382 FARNGRYIA-SGSGDKTVRLWDI-VDGKQELILSIEDGV-TTVAISPDGRYVAAGSL-DK 437

Query: 325 KEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK------ 377
             +++   +    ++  S D    S +   ++P G  +             +        
Sbjct: 438 SVRVWDTTTGYLVERLESPDGHRDSVYSVAFAPNGRDLVSGSLDKTIKMWELTPPRGMVP 497

Query: 378 ---KDGSQERLLVEDSNLQAPTW--SPSGRSLIFSRKKDG 412
                G +     E       +   +P G  ++   K  G
Sbjct: 498 GTGPKGGKCVRTFEGHKDFVLSVCLTPDGHWVMSGSKDRG 537


>gi|190572822|ref|YP_001970667.1| hypothetical protein Smlt0777 [Stenotrophomonas maltophilia K279a]
 gi|190010744|emb|CAQ44353.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 838

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 63/216 (29%), Gaps = 21/216 (9%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALI--SVQKDEAMD 283
            ++        +++LM+    +  +  G    + +A   +S + K            A +
Sbjct: 103 TFSDSRFSFGEKLWLMNVADGKERQISGLPAKLSIASVTWSPDQKWLAFNQVDAGSGANE 162

Query: 284 IYSVDLQSNATERLTNTLF--INISASYSPDSSQ-IVFESDREGKEQLYVMQSNGSDQKR 340
           ++ VD+   +  RL   L   I     + PDS   +VF                     +
Sbjct: 163 LWLVDVAGGSARRLVAGLNTVIGSGYQWLPDSRGLVVFTRPANLGAAPAADGIPTGPAVQ 222

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV------MKKDGSQERLLVEDSNLQA 394
            +           +      +   +    +F          +  DGS  R +        
Sbjct: 223 QTSQGGGVVSIRTY----QDLLKNEADARQFDYYATTQPMEVSLDGS-TRAIGAAGIFMG 277

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            + SP GR ++    +        Y + ++     +
Sbjct: 278 FSVSPDGRFVL----RQPVQRPYSYVVPVDSFPRRI 309



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 30/63 (47%), Gaps = 3/63 (4%)

Query: 372 AIGVMKKDGSQERLLVEDS---NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            + +M     +ER +       ++ + TWSP  + L F++   G   ++L+ +D+ G + 
Sbjct: 114 KLWLMNVADGKERQISGLPAKLSIASVTWSPDQKWLAFNQVDAGSGANELWLVDVAGGSA 173

Query: 429 TLI 431
             +
Sbjct: 174 RRL 176


>gi|33150742|gb|AAP97249.1|AF127799_1 G protein beta subunit-like protein [Homo sapiens]
          Length = 305

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 50/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 113 AFSPDSQYLATGTHVGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+++         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 168 IDGIINIFAI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 223

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 224 LAGTLSGHASWVLNVAFCPD 243



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 75/223 (33%), Gaps = 40/223 (17%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RL D+++ KQI  K   + P     +A 
Sbjct: 57  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLRDLENGKQI--KSIDAGPVDAWTLA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 114 -FSPDSQYLAT---GTHVGKVNI--FGVESGKKEYSL--------------DTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + +      +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFAIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQI 316
             D  + IY V   +L       L+      ++ ++ PD +  
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTHF 247


>gi|26345856|dbj|BAC36579.1| unnamed protein product [Mus musculus]
          Length = 279

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 113 AFSPDSQYLATGTHMGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 168 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 223

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 224 LAGTLSGHASWVLNVAFCPD 243



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 77/223 (34%), Gaps = 40/223 (17%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQ+  K   + P     +A 
Sbjct: 57  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQM--KSIDAGPVDAWTLA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 114 -FSPDSQYLAT---GTHMGKVNI--FGVESGKKEYSL--------------DTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQI 316
             D  + IY V   +L       L+      ++ ++ PD +  
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTHF 247



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 72/211 (34%), Gaps = 25/211 (11%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR-------------A 272
           +    ++      +  + T       ++  +R   L  ++S  G +              
Sbjct: 19  IWSVAWETNKKENIETVVTGSLDDLVKVWKWRDERLELQWSLEGHQLGVVSVDISHTLPI 78

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             S   D  + ++ ++      + +        + ++SPDS  +       GK  ++ ++
Sbjct: 79  AASSSLDAHIRLWDLE-NGKQMKSIDAGPVDAWTLAFSPDSQYLA-TGTHMGKVNIFGVE 136

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           S   +    ++ K        +SP G  +A     G    I +      +    +E   +
Sbjct: 137 SGKKEYSLDTRGKF--ILSIAYSPDGKYLASGAIDG---IINIFDIATGKLLHTLEGHAM 191

Query: 393 --QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             ++ T+SP  + L+ +     D   K+Y +
Sbjct: 192 PIRSLTFSPDSQLLVTASD---DGYIKIYDV 219


>gi|19114682|ref|NP_593770.1| RACK1 ortholog Cpc2 [Schizosaccharomyces pombe 972h-]
 gi|3023853|sp|Q10281|GBLP_SCHPO RecName: Full=Guanine nucleotide-binding protein subunit beta-like
           protein; AltName: Full=Receptor of activated protein
           kinase C
 gi|2440194|emb|CAB11079.1| RACK1 ortholog Cpc2 [Schizosaccharomyces pombe]
          Length = 314

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/265 (15%), Positives = 76/265 (28%), Gaps = 61/265 (23%)

Query: 193 LCVMDRDGAN---IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           L  + RD  N    +         + +   S +      A++D      + L D      
Sbjct: 42  LWNLVRDDVNYGVAQRRLTGHSHFVSDCALSFDSHYALSASWDK----TIRLWDLEKGEC 97

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-- 307
             +     S +L+   S + ++ ++S  +D+ + I+  ++  N    +T+    +  +  
Sbjct: 98  THQFVGHTSDVLSVSISPDNRQ-VVSGSRDKTIKIW--NIIGNCKYTITDGGHSDWVSCV 154

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SP+   + F S     + + V        +               SP G L A     
Sbjct: 155 RFSPNPDNLTFVS-AGWDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRD 213

Query: 368 GEKF---------------------------AIGVMKKDGSQERL-----------LVED 389
           G                                 +    GS  R+           L  D
Sbjct: 214 GTLMLWDLNESTHLYSLEAKANINALVFSPNRYWLCAATGSSIRIFDLETQEKVDELTVD 273

Query: 390 S-----NLQAP-----TWSPSGRSL 404
                     P     TWSP G++L
Sbjct: 274 FVGVGKKSSEPECISLTWSPDGQTL 298



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 78/223 (34%), Gaps = 22/223 (9%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--RFS 220
           +Q +       +  I   +  VVSG    ++ + +  G N +Y         +    RFS
Sbjct: 99  HQFVGHTSDVLSVSISPDNRQVVSGSRDKTIKIWNIIG-NCKYTITDGGHSDWVSCVRFS 157

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           PN   + + +   +  ++V+  D                + A   S +G     S  +D 
Sbjct: 158 PNPDNLTFVSAGWDKAVKVW--DLETFSLRTSHYGHTGYVSAVTISPDGSLCA-SGGRDG 214

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPD---------SSQIVFESDREGKEQLYVM 331
            + ++ ++ +S     L     IN    +SP+         SS  +F+ + + K     +
Sbjct: 215 TLMLWDLN-ESTHLYSLEAKANINA-LVFSPNRYWLCAATGSSIRIFDLETQEKVDELTV 272

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              G  +K      E       WSP G  + F+ ++     + 
Sbjct: 273 DFVGVGKK----SSEPECISLTWSPDGQTL-FSGWTDNLIRVW 310


>gi|229497113|ref|ZP_04390817.1| DPP IV [Porphyromonas endodontalis ATCC 35406]
 gi|229316038|gb|EEN81967.1| DPP IV [Porphyromonas endodontalis ATCC 35406]
          Length = 736

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 80/284 (28%), Gaps = 38/284 (13%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT----Y 231
            IL ++E        +       D    +   P     L  P FSP+ + VA+      +
Sbjct: 119 HILIMTERERIYRRSSRSTTYHYD-VRRKQFEPLSSGKLMIPTFSPDGRMVAFVRDNNIF 177

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--------RFSSNGKRALISVQKDEAMD 283
             +      +  T   +  + I      +            +S +G         +  + 
Sbjct: 178 IRKFDYNSEVQVTTDGKRNEVINGATDWVYEEELYCTKLLTWSQDGGYLAFVRFDESEVP 237

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
            YS+ +  N                Y     +    S       L+V   +    + +S 
Sbjct: 238 AYSMPIYGNGL-----YPGEYTY-KYPKAGEKNSSIS-------LHVYNVDQKVVRPVSL 284

Query: 344 --DKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSNL------Q 393
             DKE+      ++P  + +A          F + ++       +  + D++        
Sbjct: 285 PIDKESYIPRIEFTPINNALAVCTLNRHQNDFRLFLVDPATLIAKQTLRDTDAAYVKIEW 344

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             + +   +   F+   + D  + LY     G     +    + 
Sbjct: 345 VNSLAIDAKG--FTMVSEADGYAHLYRYSTTGERVRQLTKGEWD 386



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 62/199 (31%), Gaps = 44/199 (22%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-------- 333
             + S+ +Q+   +RL +   I  +  +SP  +   F S  +G+    +  +        
Sbjct: 17  FMLSSMGVQAQQGKRLFSLKEI-TNWHFSPRGAGGSFRSMEDGRYYTTLNDAHTAIVQYE 75

Query: 334 --NGSDQKRI---------SQDKEASYFDP------VWSPQGDLIAF------TKFSGEK 370
              G +   +         +  K   +  P        SP G  I              +
Sbjct: 76  FATGREVGTLFDLSQLASRTISKNGDFKTPEKIDDYQISPCGHHILIMTERERIYRRSSR 135

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-----KDGDTGSKLYSIDLNG 425
                      Q   L     L  PT+SP GR + F R      +  D  S++  +  +G
Sbjct: 136 STTYHYDVRRKQFEPL-SSGKLMIPTFSPDGRMVAFVRDNNIFIRKFDYNSEV-QVTTDG 193

Query: 426 RNETLINTPAYASDPQWVG 444
           +   +IN         WV 
Sbjct: 194 KRNEVINGATD-----WVY 207



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 51/168 (30%), Gaps = 35/168 (20%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRALIS 275
            SP    +   T + E I R     T      +R          ++ P FS +G+     
Sbjct: 113 ISPCGHHILIMT-ERERIYRRSSRSTTYHYDVRRKQFEPLSSGKLMIPTFSPDGRMVAFV 171

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +D  + I   D   N+  ++T             D  +    ++       +V +   
Sbjct: 172 --RDNNIFIRKFD--YNSEVQVTT------------DGKR----NEVINGATDWVYEEEL 211

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              K ++           WS  G  +AF +F   +     M   G+  
Sbjct: 212 YCTKLLT-----------WSQDGGYLAFVRFDESEVPAYSMPIYGNGL 248


>gi|154301302|ref|XP_001551064.1| hypothetical protein BC1G_10321 [Botryotinia fuckeliana B05.10]
 gi|150856222|gb|EDN31414.1| hypothetical protein BC1G_10321 [Botryotinia fuckeliana B05.10]
          Length = 596

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/349 (14%), Positives = 109/349 (31%), Gaps = 63/349 (18%)

Query: 88  KQKITNPDSIPRFQDWNSL-----GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
             K  N D++   + W ++     GA+  V GR +++ +    +++   +    + +  +
Sbjct: 94  PSKDENGDAVKNLKIWRTVEEIAEGAEKEVVGRFVQKSQTGWNLQYTFDEKYCARNVTNE 153

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
             F      R + + +  +         G+  S  +FV E                    
Sbjct: 154 VQFYESGDLRTVWNKLRVEGVADFAISPGNNYSVAVFVPERKGQ---------------- 197

Query: 203 IRYLTPSRDQILFEPRF-SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
                PS  ++   P+F +P  QK  +      D +++               +      
Sbjct: 198 -----PSAVKVFNVPQFNAPVSQKTFF----KGDKVQLKWNQLGTTLIVLAQTDVDKSNK 248

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI-VFE 319
                                 +Y +        R+T +        S+SP+S +  V  
Sbjct: 249 ---------------SYYGETTLYVLSANGGFDSRITLDKEGPIHDVSWSPNSKEFGVIY 293

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSG--EKFAIGV 375
                K  ++       +Q+ ++            ++SP G  +    F     +  I  
Sbjct: 294 GYMPAKTTIF-------NQRAVATHTFPLGPRNTILFSPTGRFVLVAGFGNLAGQMDIYD 346

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
           ++KD  +    +E  N     WSP  + ++ +        D G +L+ +
Sbjct: 347 VEKDYRKI-CTIEGGNPSVCEWSPDSKYILTATTSPRLRVDNGIRLWHV 394



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 42/273 (15%), Positives = 88/273 (32%), Gaps = 34/273 (12%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +S  S   + +L V+  +G     +T  ++  + +  +SPN ++  +         + 
Sbjct: 243 VDKSNKSYYGETTLYVLSANGGFDSRITLDKEGPIHDVSWSPNSKE--FGVIYGYMPAKT 300

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + + R           R+ IL   FS  G+  L++   + A  +   D++ +  +  T 
Sbjct: 301 TIFNQRAVATHTFPLGPRNTIL---FSPTGRFVLVAGFGNLAGQMDIYDVEKDYRKICTI 357

Query: 300 TLFINISASYSPDSSQI--VFESDREG-KEQLYVMQSNGS---------------DQKRI 341
                    +SPDS  I     S R      + +    G                  +R 
Sbjct: 358 EGGNPSVCEWSPDSKYILTATTSPRLRVDNGIRLWHVTGGIMYNEDMVELYHVTWRPQRP 417

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                  + +PV  P    +A+           G  +  G++ +        +       
Sbjct: 418 ESFPAGDFLNPVPQPHSSAVAYLGTVKTPSKPAGAYRPPGARGQATPSHFKRED-----E 472

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G S  F        G+ + + +  GR+   +  
Sbjct: 473 GGSAHFVSN-----GTSMVNTNGFGRSRRQVPG 500



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 21/130 (16%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-- 381
           G+  LYV+ +NG    RI+ DKE    D  WSP                 G M    +  
Sbjct: 252 GETTLYVLSANGGFDSRITLDKEGPIHDVSWSPNSKEFGVI--------YGYMPAKTTIF 303

Query: 382 QERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            +R +   +    P     +SP+GR ++ +   +      +Y ++ + R    I      
Sbjct: 304 NQRAVATHTFPLGPRNTILFSPTGRFVLVAGFGNLAGQMDIYDVEKDYRKICTI----EG 359

Query: 438 SDPQ---WVG 444
            +P    W  
Sbjct: 360 GNPSVCEWSP 369


>gi|119600573|gb|EAW80167.1| notchless homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
          Length = 487

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 105 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 160

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEA------SYFDPVWS 355
            +S S+SPD  ++       G    Q+ +   +   Q   +    +      S+     +
Sbjct: 161 VLSISWSPDGRKLA-----SGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHAN 215

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + +     G  ER+L     ++    W   G  L++S  +D
Sbjct: 216 PECRYVASSSKDGS---VRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 268



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 342 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 398

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 399 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 457

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 458 ADEVYAVDWSPDGQRVA 474



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 133 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLA---SGCKNGQILLWDPST 189

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ I+           LT  
Sbjct: 190 GKQVGRTLAGHSKWITGLSWEPLHANPECRYVA-SSSKDGSVRIWDT-TAGRCERILTGH 247

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 248 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 300



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 304 RTGAFEPAEASVNPQDLQGSLQELKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 360

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 361 AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 398

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 399 KLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAM 452

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 453 DLPGHADEVYAVDWSPDGQRVA 474


>gi|212224694|ref|YP_002307930.1| acylamino acid-releasing enzyme [Thermococcus onnurineus NA1]
 gi|83338507|gb|ABC11974.1| acylamino acid-releasing enzyme [Thermococcus onnurineus NA1]
 gi|212009651|gb|ACJ17033.1| acylamino acid-releasing enzyme [Thermococcus onnurineus NA1]
          Length = 623

 Score = 49.2 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 11/107 (10%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFT----KFSGEKFA--IGVMKKDGSQERLLVEDSNLQAP 395
           +  + A   DP    +GD +A+          ++   + V   +    R +    N   P
Sbjct: 10  TFSRFAYLGDPQI--KGDRVAYVLTKANMKDNRYENTVVVEDIETGTRRFI---ENASMP 64

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +SP GR L F R       S+++  D+   +   +         QW
Sbjct: 65  RFSPDGRKLAFMRPNGEKRTSEIWVADVETLSAKKVLEAKNVRFIQW 111



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 4/79 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE- 280
              +VAY           Y     ++        F      PRFS +G++    ++ +  
Sbjct: 23  KGDRVAYVLTKANMKDNRYENTVVVEDIETGTRRFIENASMPRFSPDGRKLAF-MRPNGE 81

Query: 281 --AMDIYSVDLQSNATERL 297
               +I+  D+++ + +++
Sbjct: 82  KRTSEIWVADVETLSAKKV 100



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 35/106 (33%), Gaps = 14/106 (13%)

Query: 269 GKRALISVQK----DEAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           G R    + K    D   +   V  D+++     + N         +SPD  ++ F    
Sbjct: 24  GDRVAYVLTKANMKDNRYENTVVVEDIETGTRRFIENAS----MPRFSPDGRKLAFMRPN 79

Query: 323 EGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             K   +++V        K++ + K  +     W+     +    F
Sbjct: 80  GEKRTSEIWVADVETLSAKKVLEAK--NVRFIQWNDDSRRLLVVGF 123



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 41/105 (39%), Gaps = 6/105 (5%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDD 233
            R+ +V         +    V+  D   I   T    +    PRFSP+ +K+A+     +
Sbjct: 25  DRVAYVLTKANMKDNRYENTVVVED---IETGTRRFIENASMPRFSPDGRKLAFMRPNGE 81

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +    +++ D     A K +      +   +++ + +R L+   K
Sbjct: 82  KRTSEIWVADVETLSAKKVL--EAKNVRFIQWNDDSRRLLVVGFK 124


>gi|312880841|ref|ZP_07740641.1| Curli production assembly/transport component CsgG [Aminomonas
           paucivorans DSM 12260]
 gi|310784132|gb|EFQ24530.1| Curli production assembly/transport component CsgG [Aminomonas
           paucivorans DSM 12260]
          Length = 314

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 12/107 (11%)

Query: 23  LIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFV---SIDELGGKVSEVVSKDLQRSDVF 79
           L G F   ++   + V    A   P  +A   F            ++++++ +L  + +F
Sbjct: 10  LRGRFLVAAMTLALLVVAVGAEAKPR-VAVLDFQDNSGSGAPAKAITDMMTTELFNTGMF 68

Query: 80  NLISQDSFKQKITN--------PDSIPRFQDWNSLGAQVLVTGRVIK 118
            ++ +       T          DS    Q    LG   L+TG V +
Sbjct: 69  TVVERSRMDALATEQRLAGQGLADSTTAVQMGKVLGVDYLLTGSVTQ 115


>gi|262275126|ref|ZP_06052937.1| YVTN beta-propeller repeat family protein [Grimontia hollisae CIP
           101886]
 gi|262221689|gb|EEY73003.1| YVTN beta-propeller repeat family protein [Grimontia hollisae CIP
           101886]
          Length = 330

 Score = 48.9 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/210 (17%), Positives = 77/210 (36%), Gaps = 15/210 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S   +++AY   + +D + V  MDT        +G+    +     S +G +  I   
Sbjct: 22  SYSVAAKELAYVANEKDDTVSVIDMDTMTVIDTISVGDRPRGV---ELSKDGTKLYICAS 78

Query: 278 KDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +   + I  +DL +N+    L +     + A   PD  ++ + ++ +      V   + S
Sbjct: 79  ESNTVQI--LDLATNSIIGNLPSGEDPELFA-LHPDGKRL-YIANEDDALMTVVDIPSAS 134

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
              ++    E        SP G  IA         A  +  +        + D+  +   
Sbjct: 135 VVAQVEVGVEPE--GVAVSPDGK-IAIITSETSNMAHWIDTESNQMVHNTLVDARPRYAE 191

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           ++P G+ L  S +  G     +  ID + +
Sbjct: 192 FTPDGKQLWVSAEIGGT----VAVIDTDSK 217


>gi|326472484|gb|EGD96493.1| transcriptional repressor TUP1 [Trichophyton tonsurans CBS 112818]
 gi|326481707|gb|EGE05717.1| transcriptional repressor rco-1 [Trichophyton equinum CBS 127.97]
          Length = 592

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 70/223 (31%), Gaps = 26/223 (11%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +    + DI RV  +D   +          S++   RFS++GK                 
Sbjct: 263 WYAVFNPDIPRVLDVDLVHNLI------HDSVVCCVRFSADGKHVA----TGCNRSAQIF 312

Query: 288 DLQSNATERLTNTLFIN-------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           ++ +           ++        S  +SPD   +   ++    +Q+ V        K 
Sbjct: 313 EVSTGLLVSTLQDDSVDKDGDLYIRSVCFSPDGRYLATGAE---DKQIRVWDIASRTIKN 369

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           I    E   +   ++  G  IA            ++  DG QE +L  +  +     SP 
Sbjct: 370 IFSGHEQDIYSLDFARNGRYIASGSGDKTVRLWDIV--DGKQELILSIEDGVTTVAISPD 427

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           GR +        D   +++     G     + +P    D  + 
Sbjct: 428 GRYVAAGSL---DKSVRVWDT-TTGYLVERLESPDGHRDSVYS 466



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 29/220 (13%), Positives = 68/220 (30%), Gaps = 20/220 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    D  +    FSP+ + +A    D     ++ + D                I +  
Sbjct: 327 SVDKDGDLYIRSVCFSPDGRYLATGAEDK----QIRVWDIASRTIKNIFSGHEQDIYSLD 382

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F+ NG+    S   D+ + ++ + +       L+    +  + + SPD   +   S  + 
Sbjct: 383 FARNGRYIA-SGSGDKTVRLWDI-VDGKQELILSIEDGV-TTVAISPDGRYVAAGSL-DK 438

Query: 325 KEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK------ 377
             +++   +    ++  S D    S +   ++P G  +             +        
Sbjct: 439 SVRVWDTTTGYLVERLESPDGHRDSVYSVAFAPNGRDLVSGSLDKTIKMWELTPPRGMVP 498

Query: 378 ---KDGSQERLLVEDSNLQAPTW--SPSGRSLIFSRKKDG 412
                G +     E       +   +P G  ++   K  G
Sbjct: 499 GTGPKGGKCVRTFEGHKDFVLSVCLTPDGHWVMSGSKDRG 538


>gi|299748471|ref|XP_001839156.2| WD repeat-containing protein 61 [Coprinopsis cinerea okayama7#130]
 gi|298407987|gb|EAU82660.2| WD repeat-containing protein 61 [Coprinopsis cinerea okayama7#130]
          Length = 323

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 6/133 (4%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S  SG +       D  G  +   +  R++       SP+  +VA A+    +  ++++ 
Sbjct: 127 SGASGNVTIRSAKTDNFGERLTSFSSGRNKFGMACAHSPDGSRVALAS----ETGQIFIF 182

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ-SNATERLTNTL 301
           D           +    + +  +S +    LIS  +D+ + ++ V           T   
Sbjct: 183 DLVSGSLSTTYTSHAMSVRSIAWSPD-SSLLISASEDKRLVLHDVRASPGGIVASFTGHS 241

Query: 302 FINISASYSPDSS 314
              +S   SPDS 
Sbjct: 242 SWVLSTDISPDSR 254



 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 33/196 (16%), Positives = 57/196 (29%), Gaps = 20/196 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFS----SNGKR 271
             SP+     Y + +        L D    +   R  +++       P +S     N K 
Sbjct: 68  SVSPDGTLALYNSIEG----LTSLWDLESGQVVARHESYQRSTEDAEPAWSVSLNPN-KE 122

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLF----INISASYSPDSSQIVFESDREGKEQ 327
                     + I S    +   ERLT+         ++ ++SPD S++   S+     Q
Sbjct: 123 TYACSGASGNVTIRSAKTDNFG-ERLTSFSSGRNKFGMACAHSPDGSRVALASE---TGQ 178

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +++                 S     WSP   L+             V    G       
Sbjct: 179 IFIFDLVSGSLSTTYTSHAMSVRSIAWSPDSSLLISASEDKRLVLHDVRASPGGIVASFT 238

Query: 388 -EDSNLQAPTWSPSGR 402
              S + +   SP  R
Sbjct: 239 GHSSWVLSTDISPDSR 254


>gi|291446533|ref|ZP_06585923.1| peptidase [Streptomyces roseosporus NRRL 15998]
 gi|291349480|gb|EFE76384.1| peptidase [Streptomyces roseosporus NRRL 15998]
          Length = 607

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 66/199 (33%), Gaps = 15/199 (7%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFS--------SNGKRALISVQKDEAMDIYSVDLQSNA 293
           MD  +   P    ++     APR S         +  R+L         ++Y+ D  S  
Sbjct: 1   MDGDMTTDPAAAPDWEKRFRAPRVSLPDWAEDAPD--RSLFVSNATGTYELYAWDRASGR 58

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDP 352
             ++T+          +PD   + + SD +G E  +++ Q  G  +   +    A  +  
Sbjct: 59  QRQVTDRPNGTTDGVLTPDGEAVWWFSDTDGDEFGVWMRQPFGGGEDEPAAPGLAPSYPA 118

Query: 353 --VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
                  G  +       +   + +++  G++   +     +      S  G  +     
Sbjct: 119 GLAIGRDGSAVIGRSTDEDGTTVHLVRAPGAEPVEIYRHRESAGVGDLSHDGTLIALEHT 178

Query: 410 KDGDT-GSKLYSIDLNGRN 427
           + GD   S L  +  +G  
Sbjct: 179 EHGDAMHSALRVVRPDGST 197



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 61/199 (30%), Gaps = 10/199 (5%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G    R         +     ++ ++   GA    +   R+        S +   +A 
Sbjct: 117 PAGLAIGRDGSAVIGRSTDEDGTTVHLVRAPGAEPVEIYRHRESAGVG-DLSHDGTLIAL 175

Query: 229 ATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNG-------KRALISVQKDE 280
              +  D +   L   R D +    + +          S  G        R L+  Q+  
Sbjct: 176 EHTEHGDAMHSALRVVRPDGSTVAELDDTEGGTKELGLSVLGFAPVAGDTRLLVGHQRRG 235

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             +    D  +     L   L  ++ A + PD S ++ E + E + +L+  +   +   R
Sbjct: 236 RWEPMIWDPVAGTETPLPIDLPGDVGAEWYPDGSALLVEHEFEARSELWRYEPGAAAPVR 295

Query: 341 ISQDKEASYFDPVWSPQGD 359
           + +    +       P G 
Sbjct: 296 V-ETPAGTVSGATARPDGT 313


>gi|301105264|ref|XP_002901716.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262100720|gb|EEY58772.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 434

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 67/211 (31%), Gaps = 20/211 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRIDRAPK---------RIGN 255
           +  S    ++E  FSP+ + +A A+ D   +   + L +  +               + +
Sbjct: 151 VLSSHKNDVWELAFSPDGEMLASASSDGSVVLWEIKLKEKAVGFCQTMELKAAALHVLQS 210

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                    +S + +  L S  +   + ++   +     +R  +   +     + P   Q
Sbjct: 211 LEGPADCLAWSPDSRFLLSSGSRSSTIQLWD-RMSGLCEKRFEHPGGVVTKMQWLPCGDQ 269

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            V        ++  V+ + G                 V      +          + I V
Sbjct: 270 FV----SGSADKSLVLWNAGESSVAYQWSGRRVLDVIVHPHDSKVFVLIS----GYEIRV 321

Query: 376 MKKDGSQERLLVEDSNLQAP-TWSPSGRSLI 405
                  + L +E  NL +  T SPSG+ L+
Sbjct: 322 YDVAHKSDELFIESENLMSCLTVSPSGKFLL 352


>gi|255723692|ref|XP_002546775.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240134666|gb|EER34220.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 875

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 74/222 (33%), Gaps = 31/222 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDD------------EDILRVYLMDTRIDRAPKRI 253
                + ++   +FSP+ + +A  + D                      D       KR+
Sbjct: 70  TMSRHNGVVTSLKFSPDGRWLASGSDDKICLIWEKDNTQIPKSFGSEEQDLEHWTVRKRL 129

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
               + I    +S +G   L++V  D ++ I++  L     +R      +     + P +
Sbjct: 130 VAHDNDIQDICWSPDGN-LLVTVGLDRSIIIWNA-LTFERIKRYDIHQSMVKGVVFDPAN 187

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-------------VWSPQGDL 360
                 SD +   +++      ++        E +  DP              WSP G  
Sbjct: 188 KFFATASD-DRTVRIFRYYKKLNEYNNYEFQMEHTVIDPFKKSPLTSYFRRMSWSPDGQH 246

Query: 361 IAFTKFSGEKF-AIGVMKKD--GSQERLLVEDSNLQAPTWSP 399
           IA    +     ++ ++ +   G    L+  ++ ++   +SP
Sbjct: 247 IAVPNATNGPVPSVAIINRGNWGCDISLIGHEAPVEVCAFSP 288



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 54/338 (15%), Positives = 103/338 (30%), Gaps = 59/338 (17%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS--DDIYQSI-TGEKGDF 173
            +     L    ++WDV    +           S R+   T+S  + +  S+     G +
Sbjct: 30  TRLASGGLDGNIKIWDVPTINEFFNVSGNLPDKSLRRPLCTMSRHNGVVTSLKFSPDGRW 89

Query: 174 ----NSRILFVSESVVSGIIKNSLCVMDRD--GANIRYLTPSRDQILFEPRFSPNQQKVA 227
               +   + +     +  I  S    ++D     +R    + D  + +  +SP+   + 
Sbjct: 90  LASGSDDKICLIWEKDNTQIPKSFGSEEQDLEHWTVRKRLVAHDNDIQDICWSPDGNLLV 149

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-- 285
               D      + + +       KR    +SM+    F    K    +   D  + I+  
Sbjct: 150 TVGLDR----SIIIWNALTFERIKRYDIHQSMVKGVVFDPANKFFA-TASDDRTVRIFRY 204

Query: 286 -----------------SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQ 327
                             +D    +   LT+        S+SPD   I   +   G    
Sbjct: 205 YKKLNEYNNYEFQMEHTVIDPFKKSP--LTSYF---RRMSWSPDGQHIAVPNATNGPVPS 259

Query: 328 LYVMQSN--GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + ++     G D   I    EA      +SP+   I       ++     +   G Q+R 
Sbjct: 260 VAIINRGNWGCDISLI--GHEAPVEVCAFSPRLFQIGEPASEDDEPKFQTVVATGGQDRT 317

Query: 386 LVEDSNLQA-P---------------TWSPSGRSLIFS 407
           L   S   + P                W+P G++  FS
Sbjct: 318 LAVWSTSNSRPIVVCQDIVDSAITDICWAPDGQTFYFS 355



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 42/146 (28%), Gaps = 25/146 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV- 276
            +SP+ Q +A     +  +  V +++         +    + +    FS      L  + 
Sbjct: 239 SWSPDGQHIAVPNATNGPVPSVAIINRGNWGCDISLIGHEAPVEVCAFSPR----LFQIG 294

Query: 277 ---QKDEAMDIYSVDLQSNATERLTNTLFINISA---------------SYSPDSSQIVF 318
               +D+     +V         L      N                   ++PD     F
Sbjct: 295 EPASEDDEPKFQTVVATGGQDRTLAVWSTSNSRPIVVCQDIVDSAITDICWAPDGQTFYF 354

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQD 344
            S  +G         +G   K +++D
Sbjct: 355 -SCLDGSITCVRF-LDGELGKVVTED 378



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 57/187 (30%), Gaps = 29/187 (15%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIY-----SVDLQSNAT----------ERLT 298
                ++ + +FS +G+    S   D+   I+      +     +           +RL 
Sbjct: 72  SRHNGVVTSLKFSPDGRWLA-SGSDDKICLIWEKDNTQIPKSFGSEEQDLEHWTVRKRLV 130

Query: 299 NTLFINISASYSPDSSQIVFES-DRE-------GKEQLYVMQSNGSDQKRISQDKEASYF 350
                     +SPD + +V    DR          E++     + S  K +  D  A+ F
Sbjct: 131 AHDNDIQDICWSPDGNLLVTVGLDRSIIIWNALTFERIKRYDIHQSMVKGVVFD-PANKF 189

Query: 351 DPVWSPQGDLIAFTKF----SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
               S    +  F  +        +   +        +     S  +  +WSP G+ +  
Sbjct: 190 FATASDDRTVRIFRYYKKLNEYNNYEFQMEHTVIDPFKKSPLTSYFRRMSWSPDGQHIAV 249

Query: 407 SRKKDGD 413
               +G 
Sbjct: 250 PNATNGP 256


>gi|70728415|ref|YP_258164.1| WD repeat-containing protein [Pseudomonas fluorescens Pf-5]
 gi|68342714|gb|AAY90320.1| WD-repeat family protein, putative [Pseudomonas fluorescens Pf-5]
          Length = 567

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 79/213 (37%), Gaps = 21/213 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS     +  V +     ++ +    D  +    FSP+ Q +A  + D      + L + 
Sbjct: 60  VSASSDYTARVWEVPSLRLKTVLIGHDDDIEMAAFSPDGQTIATCSRDH----SIRLFNL 115

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  + +    + +++  +S++G+  + S   D ++  +  D  +       +   + 
Sbjct: 116 -SGQTLRILHGHTADVISVCWSADGQTLV-SSSDDGSIRRW--DANTGQQLETIDLGGVE 171

Query: 305 ISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               + S +   I+F  D EGK  + ++   G+    +     A     +W      +  
Sbjct: 172 TDTVALSREG--IIFAGDDEGK--ISIISPRGT---LLQPAHSAGIKRIIW-DDSQRLLI 223

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +        +  +K+DG+    LV+ +    P+
Sbjct: 224 SLSYDRSVMLWHLKQDGT----LVKTAETSLPS 252



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 54/159 (33%), Gaps = 13/159 (8%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                     +   D ++    +      +    +++   + +V  S         V + 
Sbjct: 17  YVATAGYDNQVILWDARTRTPIQRVLHDHLANQCAFNAAGTLLVSASS---DYTARVWEV 73

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNL 392
                K +    +       +SP G  IA         +I +    G   R+L    +++
Sbjct: 74  PSLRLKTVLIGHDDDIEMAAFSPDGQTIATCSRD---HSIRLFNLSGQTLRILHGHTADV 130

Query: 393 QAPTWSPSGRSLIFSRKK------DGDTGSKLYSIDLNG 425
            +  WS  G++L+ S         D +TG +L +IDL G
Sbjct: 131 ISVCWSADGQTLVSSSDDGSIRRWDANTGQQLETIDLGG 169


>gi|302655831|ref|XP_003019698.1| vegetative incompatibility WD repeat protein, putative
           [Trichophyton verrucosum HKI 0517]
 gi|291183438|gb|EFE39053.1| vegetative incompatibility WD repeat protein, putative
           [Trichophyton verrucosum HKI 0517]
          Length = 570

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 70/223 (31%), Gaps = 26/223 (11%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +    + DI RV  +D   +          S++   RFS++GK                 
Sbjct: 301 WYAVFNPDIPRVLDVDLVHNLI------HDSVVCCVRFSADGKHVA----TGCNRSAQIF 350

Query: 288 DLQSNATERLTNTLFIN-------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           ++ +           ++        S  +SPD   +   ++    +Q+ V        K 
Sbjct: 351 EVSTGLLVSTLQDDSVDKDGDLYIRSVCFSPDGRYLATGAE---DKQIRVWDIASRTIKN 407

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           I    E   +   ++  G  IA            ++  DG QE +L  +  +     SP 
Sbjct: 408 IFSGHEQDIYSLDFARNGRYIASGSGDKTVRLWDIV--DGKQELILSIEDGVTTVAISPD 465

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           GR +        D   +++     G     + +P    D  + 
Sbjct: 466 GRYVAAGSL---DKSVRVWDT-TTGYLVERLESPDGHRDSVYS 504



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 56/164 (34%), Gaps = 9/164 (5%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    D  +    FSP+ + +A    D     ++ + D                I +  
Sbjct: 365 SVDKDGDLYIRSVCFSPDGRYLATGAEDK----QIRVWDIASRTIKNIFSGHEQDIYSLD 420

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F+ NG+    S   D+ + ++ + +       L+    +  + + SPD   +   S  + 
Sbjct: 421 FARNGRYIA-SGSGDKTVRLWDI-VDGKQELILSIEDGV-TTVAISPDGRYVAAGSL-DK 476

Query: 325 KEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFS 367
             +++   +    ++  S D    S +   ++P G  +      
Sbjct: 477 SVRVWDTTTGYLVERLESPDGHRDSVYSVAFAPNGRDLVSGSLD 520


>gi|302555642|ref|ZP_07307984.1| WD-40 repeat-containing protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302473260|gb|EFL36353.1| WD-40 repeat-containing protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 835

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 57/364 (15%), Positives = 106/364 (29%), Gaps = 65/364 (17%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY------- 163
           LVTG     G D+     RLWD+ D ++++       P   R +A    D +        
Sbjct: 426 LVTG-----GDDQ---TARLWDLTDGRELMALPQ---PNPVRAVAFGPGDVLVTGDDEGR 474

Query: 164 -------------QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
                         + T          + V+ +  +G     +      G        + 
Sbjct: 475 VLLWHLPPPVTLAPAPTTSMAYAQEGRMLVTANAEAGA---RIWSRSPAGHVTPLAALAH 531

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSS 267
              +     SP+ + +  A  D     R  L D      P  +        A      S 
Sbjct: 532 PAAVNAVTVSPDGRLLVTAGQDH----RARLWDVTDPHRPALLSTLSRHTDALYTVAMSK 587

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREG 324
           + KR L +  +D    ++ +   S     L   ++      S S S D   +       G
Sbjct: 588 D-KRLLATGGEDHTAQLWDISRPS-HPTHLADMSDHTDRVNSVSLSKDGRLMA---TAGG 642

Query: 325 KEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             +  +   +      +  +            SP   L+A T     K  +  + K   +
Sbjct: 643 DYRARLWDLSDRRHPVLIAELLHPNQVNGVELSPDNRLVA-TTDDDRKVRLWAVPKTRPR 701

Query: 383 ERLLVEDS----------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +    S            +   ++P GR+L  +     D  ++L+ +   GR   L  
Sbjct: 702 ALVRTSTSPLSIMIGHREASRGAAFAPDGRTLATTSD---DRTAQLWDVVDPGRPVLLTA 758

Query: 433 TPAY 436
              +
Sbjct: 759 LTGH 762



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/221 (13%), Positives = 73/221 (33%), Gaps = 22/221 (9%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR---IGNFRSMILAPRF 265
             +  +    FSP+ + +A       D   V L +    R P     + + ++ + A  F
Sbjct: 319 GHEGPVNGVAFSPDSRTLA----TAGDDRTVRLWNMTHGRGPALTSTLSSHKAQVRAVAF 374

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREG 324
           + +G+                 D +       L     +  S ++ PD   +V      G
Sbjct: 375 APDGRTLASVSFDQTVHLTPVADPRHPKRPTVLRGHNGLIHSVAFRPDGRHLV----TGG 430

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +Q   +      ++ ++  +        + P GD++      G      +         
Sbjct: 431 DDQTARLWDLTDGRELMALPQPNPVRAVAFGP-GDVLVTGDDEGRVLLWHLPPP------ 483

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           + +  +   +  ++  GR L+     + + G++++S    G
Sbjct: 484 VTLAPAPTTSMAYAQEGRMLV---TANAEAGARIWSRSPAG 521



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/252 (16%), Positives = 83/252 (32%), Gaps = 40/252 (15%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +     S    +    F+P+ + +A  ++D      V+L      R PKR    R  
Sbjct: 355 GPALTSTLSSHKAQVRAVAFAPDGRTLASVSFDQ----TVHLTPVADPRHPKRPTVLRGH 410

Query: 260 IL---APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                +  F  +G+  + +   D+   ++           LT+   +      +P    +
Sbjct: 411 NGLIHSVAFRPDGRHLV-TGGDDQTARLWD----------LTDGRELMALPQPNP-VRAV 458

Query: 317 VF-------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            F         D EG+  L+ +               A      ++ +G ++        
Sbjct: 459 AFGPGDVLVTGDDEGRVLLWHLPPP-------VTLAPAPTTSMAYAQEGRMLVTANAEAG 511

Query: 370 KFAIGVMKKDG--SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              I      G  +    L   + + A T SP GR L+       D  ++L+ +  +   
Sbjct: 512 A-RIWSRSPAGHVTPLAALAHPAAVNAVTVSPDGRLLV---TAGQDHRARLWDV-TDPHR 566

Query: 428 ETLINTPAYASD 439
             L++T +  +D
Sbjct: 567 PALLSTLSRHTD 578



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/190 (12%), Positives = 60/190 (31%), Gaps = 16/190 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-----GNFRSMILAPRFSSNGKRA 272
             SP+ + +A  T +      + + D      P R+           +    FS + +  
Sbjct: 281 AVSPDARTLAAVTGEGG----LRVWDITRRERPVRLPEGTGAGHEGPVNGVAFSPDSRTL 336

Query: 273 LISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             +   D  + ++++           L++      + +++PD   +   S  +      V
Sbjct: 337 A-TAGDDRTVRLWNMTHGRGPALTSTLSSHKAQVRAVAFAPDGRTLASVSFDQTVHLTPV 395

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVED 389
                  +  + +          + P G  +      G+     +    DG +   L + 
Sbjct: 396 ADPRHPKRPTVLRGHNGLIHSVAFRPDGRHLV---TGGDDQTARLWDLTDGRELMALPQP 452

Query: 390 SNLQAPTWSP 399
           + ++A  + P
Sbjct: 453 NPVRAVAFGP 462



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 20/156 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALISVQ 277
           S + + +A          R  L D    R P  I      + +     S +  R + +  
Sbjct: 631 SKDGRLMA----TAGGDYRARLWDLSDRRHPVLIAELLHPNQVNGVELSPD-NRLVATTD 685

Query: 278 KDEAMDIYSVD---------LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            D  + +++V            ++    +      +  A+++PD   +   SD +   QL
Sbjct: 686 DDRKVRLWAVPKTRPRALVRTSTSPLSIMIGHREASRGAAFAPDGRTLATTSD-DRTAQL 744

Query: 329 YVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIA 362
           + +  +      ++          D  +SP G  +A
Sbjct: 745 WDV-VDPGRPVLLTALTGHTGPVLDVEFSPDGRSLA 779



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 64/225 (28%), Gaps = 27/225 (12%)

Query: 240 YLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            L D      P  + +       + +   S +G+                 DL       
Sbjct: 602 QLWDISRPSHPTHLADMSDHTDRVNSVSLSKDGRLMA---TAGGDYRARLWDLSDRRHPV 658

Query: 297 LTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQ--------SNGSDQKRISQDK 345
           L               SPD +++V  +D + K +L+ +            +    I    
Sbjct: 659 LIAELLHPNQVNGVELSPD-NRLVATTDDDRKVRLWAVPKTRPRALVRTSTSPLSIMIGH 717

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPSG 401
             +     ++P G  +A T          V+     +  LL   +    P     +SP G
Sbjct: 718 REASRGAAFAPDGRTLATTSDDRTAQLWDVVDP--GRPVLLTALTGHTGPVLDVEFSPDG 775

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           RSL        D   + +S D+      +       +  +W   +
Sbjct: 776 RSLA---TAGQDATLRFWSNDVAAAIRRVCALDGPLNREEWKAHL 817



 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 63/177 (35%), Gaps = 15/177 (8%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR++       R   RLWD+ DR+  +       P     +  +  + +  +   ++   
Sbjct: 634 GRLMATAGGDYRA--RLWDLSDRRHPVLIAELLHPNQVNGVELSPDNRLVATTDDDR--- 688

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             R+  V ++    +++ S         +   +     +      F+P+ + +A  + D 
Sbjct: 689 KVRLWAVPKTRPRALVRTS--------TSPLSIMIGHREASRGAAFAPDGRTLATTSDDR 740

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              L   ++D         +      +L   FS +G+    + Q D  +  +S D+ 
Sbjct: 741 TAQLW-DVVDPGRPVLLTALTGHTGPVLDVEFSPDGRSLATAGQ-DATLRFWSNDVA 795


>gi|302896822|ref|XP_003047290.1| hypothetical protein NECHADRAFT_53746 [Nectria haematococca mpVI
           77-13-4]
 gi|256728220|gb|EEU41577.1| hypothetical protein NECHADRAFT_53746 [Nectria haematococca mpVI
           77-13-4]
          Length = 359

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 60/167 (35%), Gaps = 9/167 (5%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
             D + I  +       +    FS + + +A A+ DD+    + L DT      +R+   
Sbjct: 47  HDDWSPILQVLEGHKYDVTSVAFSNDGKLIASASADDK----ICLWDTETGSLKRRLRIE 102

Query: 257 RSMILAPRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            + +    FS  G+     S +K +   I   D  SN          ++ S ++S + S 
Sbjct: 103 NASLENTAFSPRGQLIASGSYEKQQKFTIERDDFLSNEHWHPGQGARLD-SLAFSANGSA 161

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            V  S   G   L +         +      ++     +SP G ++A
Sbjct: 162 KVSGS---GHGSLQLWDPETGKPSKELLKHSSTTRTVAFSPDGTMVA 205



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 84/252 (33%), Gaps = 38/252 (15%)

Query: 203 IRYLTPSRDQILFEPRFSPNQ----QKVAYATYDDEDIL-----RVYLMDTRIDRAPKRI 253
            +  T  RD  L    + P Q      +A++      +       + L D    +  K +
Sbjct: 126 QQKFTIERDDFLSNEHWHPGQGARLDSLAFSANGSAKVSGSGHGSLQLWDPETGKPSKEL 185

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
               S      FS +G         D ++ ++ +   S  +E+L        +       
Sbjct: 186 LKHSSTTRTVAFSPDGTMVA--SSYDCSIRLWDLKSCSLPSEQLLELKKPRDNM------ 237

Query: 314 SQIVFESDR--------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            ++V  SDR             ++ +++     +        +     +SP+ D++AFT 
Sbjct: 238 RRMVLSSDRKILADLSEGKTMNIWKLEAGTLIPQGARFP---AIEKFAFSPRCDVLAFTT 294

Query: 366 FSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID- 422
              +   I +      ++   VE    +++  ++S  G +L             ++ +D 
Sbjct: 295 AESDP-RIQIWNLTEGEKTYAVEKIGYDVEELSFSSDGNTLAVL------LSFSVHLLDP 347

Query: 423 LNGRNETLINTP 434
             G    ++ +P
Sbjct: 348 ATGATRQILESP 359


>gi|298527778|ref|ZP_07015182.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511430|gb|EFI35332.1| conserved hypothetical protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 418

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/243 (16%), Positives = 79/243 (32%), Gaps = 51/243 (20%)

Query: 214 LFEPRFSPNQQKVA---------YATYDDEDILRV---------YLMDTRIDRAPKRIGN 255
            + P FSP+  +VA         Y    D               +   T    AP R+  
Sbjct: 191 AWTPTFSPDGSRVAAQMRSSLYDYTIIVDGTPWSKNFAMVWDPCFNPKTGTVVAPVRMAG 250

Query: 256 FRSMI--------------LAPRFSSNGKRA-LISVQKDEAMDIYSVDLQSNATERLTNT 300
              M                  +FS +G     I   +      ++V   +N    L NT
Sbjct: 251 KWGMAENEQVIWDPVYFQLWEQKFSPDGNNLYAICAPQYGR---WTVVHNNNTWNVLVNT 307

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +  ++  + SPD  +    +  + K  +    +       +        + PV+SP    
Sbjct: 308 MLTDL--TVSPDGQRAAAAAKEKDKWTIMADDA-------LWPQWYDMVWTPVFSPDSKH 358

Query: 361 IAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           IA   +  G+K  + +   DG   +   + ++   P +SP  + ++    + G     + 
Sbjct: 359 IATKVEKPGKKLTVAI---DGKHYKE--DFTHCWEPVFSPDSQKVLIRGVQGGKFKRIVA 413

Query: 420 SID 422
            ++
Sbjct: 414 KVN 416



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 62/204 (30%), Gaps = 50/204 (24%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
               P FS +G R    ++         VD         +    +     ++P +  +V 
Sbjct: 190 NAWTPTFSPDGSRVAAQMRSSLYDYTIIVDG-----TPWSKNFAMVWDPCFNPKTGTVVA 244

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA----------FTKFSG 368
                GK  +        +++ I        ++  +SP G+ +               + 
Sbjct: 245 PVRMAGKWGM------AENEQVIWDPVYFQLWEQKFSPDGNNLYAICAPQYGRWTVVHNN 298

Query: 369 EKFAIGV--------MKKDGSQE----------RLLVEDSNL-------QAPTWSPSGRS 403
             + + V        +  DG +            ++ +D+           P +SP  + 
Sbjct: 299 NTWNVLVNTMLTDLTVSPDGQRAAAAAKEKDKWTIMADDALWPQWYDMVWTPVFSPDSKH 358

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRN 427
           +    +K G       ++ ++G++
Sbjct: 359 IATKVEKPGKKL----TVAIDGKH 378



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 54/170 (31%), Gaps = 29/170 (17%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N +    + D   + PRFSP+ +    A+ D E           +D  P           
Sbjct: 55  NAKAWGQTFDN-AWYPRFSPDGRLTCVASTDME-------WTLAVDGEPWPETYGYIWNT 106

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              FS  G     ++Q+D     Y + +       L  T       + S D  +      
Sbjct: 107 M--FSEKGDVIAAAIQQDGT---YGMAINGEQVGELYETAS---EFTLSADGKRTAAVVQ 158

Query: 322 REG---------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +          ++  Y +  +G    +    K  + + P +SP G  +A
Sbjct: 159 VQSMDAADIFTFQQGCYSVAVDG----QAWDIKVVNAWTPTFSPDGSRVA 204


>gi|254172144|ref|ZP_04878820.1| RIO1 family protein [Thermococcus sp. AM4]
 gi|214034040|gb|EEB74866.1| RIO1 family protein [Thermococcus sp. AM4]
          Length = 1287

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/295 (14%), Positives = 86/295 (29%), Gaps = 39/295 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSE-SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           D I    T   G   S +  +      +   + +    D D AN   +  + D I+    
Sbjct: 8   DIIIVGSTESFGAGKSDVWVLRFDENGNVKWQKTYGGSDYDEANAVTIAENEDIIVAGYT 67

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM----ILAPRFSSNGKRALI 274
           +S          +       ++++    +   K    F         +   + NG   +I
Sbjct: 68  WS----------FSTGWNCDIWVLRLDSEGNIKWQKTFGGNKDDFANSIVLAPNGDLIVI 117

Query: 275 SVQKDEA-----MDIYSVDLQSNATERLTNTLFINISASYS---PDSSQIVF---ESDRE 323
                         I  ++   N   + T        AS +   P    IV     S   
Sbjct: 118 GYTYSFGAKTLDAWILRLNSNGNIKWQKTYGGGNQDEASMAVVTPSGDIIVAGHTGSFGA 177

Query: 324 GKEQLYV--MQSNGSDQKRISQDKEASYFDPVW--SPQGDLIAFTK---FSGEKFAIGVM 376
           GK   +V  +  NG+ + + +              +P  D+I       F   K  + V+
Sbjct: 178 GKWDSWVLCLDENGNVKWQKTYGGNNYDVANAIALAPNNDIIIAGHTGSFGAGKGNVWVL 237

Query: 377 KKD--GSQERLLVEDSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           + D  G+         +      A T + +G  ++    +       +  +  +G
Sbjct: 238 RLDENGNVIWQKTYGGSDYDEANAVTIAENGDIIVAGYTRSFGDDVWILRLPPDG 292


>gi|148689320|gb|EDL21267.1| acylpeptide hydrolase, isoform CRA_b [Mus musculus]
          Length = 541

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 17/131 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD----DEDILRVYLMD 243
             +++L  +D  G     L       +  PR SP+Q +V Y  Y          +++L D
Sbjct: 86  NRRSALYYVDLSGGKCE-LLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYD 144

Query: 244 TRI-------DRAPKRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQS 291
                     D  P+++G   S I         +S++ +R +    +    D+++VD Q+
Sbjct: 145 WYTKVTSLVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQT 204

Query: 292 NATERLTNTLF 302
            +   LT    
Sbjct: 205 GSVTSLTAGGS 215



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 66/188 (35%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D +  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 33  LCVLDIESGNISVLEGVPENVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRYCTNRRSALY 92

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEA-MDIYSVDLQSNA-- 293
            +D    +  + + +    + +PR S +  R +     S+        ++  D  +    
Sbjct: 93  YVDLSGGKC-ELLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYDWYTKVTS 151

Query: 294 ------TERLTNT-LFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  +   I  S      +S DS ++VF+S +  ++ L+ + +       ++
Sbjct: 152 LVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQTGSVTSLT 211

Query: 343 QDKEASYF 350
               A  +
Sbjct: 212 AGGSAGSW 219



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 38/136 (27%), Gaps = 19/136 (13%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQ- 332
           +    +Y VDL     E L++      S   SPD  ++V+             QL++   
Sbjct: 86  NRRSALYYVDLSGGKCELLSDESLAVCSPRLSPDQCRVVYLQYPSLAPHHQCSQLFLYDW 145

Query: 333 -------SNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                        +++ +     Y        WS     + F      +  +  +     
Sbjct: 146 YTKVTSLVVDIVPRQLGESFSGIYCSLLPLGCWSADSQRVVFDSVQRSRQDLFAVDTQTG 205

Query: 382 QERLLVEDSNLQAPTW 397
               L    +    +W
Sbjct: 206 SVTSLTAGGSAG--SW 219


>gi|109113988|ref|XP_001113853.1| PREDICTED: notchless protein homolog 1 isoform 2 [Macaca mulatta]
          Length = 485

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 103 VTRCTSSLDGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 158

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEA------SYFDPVWS 355
            +S S+SPD  ++       G    Q+ +   +   Q   +    +      S+     +
Sbjct: 159 VLSISWSPDGKKLA-----SGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHAN 213

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + +     G  ER+L     ++    W   G  L++S  +D
Sbjct: 214 PECRYVASSSKDGS---VRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 266



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 396

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 397 KLWDGRTGKYLGSLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 455

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 456 ADEVYAVDWSPDGQRVA 472



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 131 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA---SGCKNGQILLWDPST 187

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ I+           LT  
Sbjct: 188 GKQVGRTLAGHSKWITGLSWEPLHANPECRYVA-SSSKDGSVRIWDT-TAGRCERILTGH 245

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 246 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298



 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 37/100 (37%), Gaps = 6/100 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++LF  +S +         +   DG   +YL         +++  +S + + +   + D 
Sbjct: 377 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLGSLRGHVAAVYQIAWSADSRLLVSGSSDS 436

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                + + D +  +    +      + A  +S +G+R  
Sbjct: 437 ----TLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVA 472


>gi|326926438|ref|XP_003209407.1| PREDICTED: WD repeat-containing protein 61-like [Meleagris
           gallopavo]
          Length = 305

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  ++  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 113 AFSPDSQFLATGSHVGK----VNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 168 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 223

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 224 LAGTLSGHGSWVLNVAFCPD 243



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 84/268 (31%), Gaps = 43/268 (16%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           TG +       L    RLWD++  KQI  K   + P                        
Sbjct: 75  TGSI--AASSSLDAHIRLWDLETGKQI--KSIDAGPVD-----------------AWSLA 113

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F+    F++    +G     + +   +     Y   +R + +    +SP+ + +A    D
Sbjct: 114 FSPDSQFLA----TGSHVGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLASGAID 169

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DL 289
                 + + D    +    +      I +  FS +  + L++   D  + IY V   +L
Sbjct: 170 G----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTASDDGYIKIYDVQHANL 224

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                  L+      ++ ++ PD +           + + V  +          D +   
Sbjct: 225 AGT----LSGHGSWVLNVAFCPDDTHF---VSSSSDKSVKVWDAGTRTCVHTFFDHQDQV 277

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +   ++  G  I      G+   I +  
Sbjct: 278 WGVKYNGSGSKIVSV---GDDQEIHIYD 302



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 57/200 (28%), Gaps = 12/200 (6%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           ++++        +     S      A ++ D      + L D    +  K I        
Sbjct: 55  DLQWTLEGHQLGVVSVDISHTGSIAASSSLD----AHIRLWDLETGKQIKSIDAGPVDAW 110

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFES 320
           +  FS + +    +      ++I+ V+        L T   FI +S +YSPD   +    
Sbjct: 111 SLAFSPDSQFLA-TGSHVGKVNIFGVE-TGKKEYSLDTRGKFI-LSIAYSPDGKYLA--- 164

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + +            +          +SP   L+      G      V   + 
Sbjct: 165 SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANL 224

Query: 381 SQERLLVEDSNLQAPTWSPS 400
           +   L    S +    + P 
Sbjct: 225 AG-TLSGHGSWVLNVAFCPD 243


>gi|47227128|emb|CAG00490.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 545

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 56/181 (30%), Gaps = 19/181 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A          + +    FSP  + +A  + D    +R + + T       R       +
Sbjct: 96  ARCTSSLQGHTEAVISTAFSPTGKYLASGSGDT--TVRFWDLTTETPLYTARGHTHW--V 151

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNT----LFINISA-SYSPDS 313
           L+  +S +GK+        +   I   D  +       LT       +I       +P+ 
Sbjct: 152 LSIAWSPDGKKLA---SGCKNSQICLWDPATGTQLGRTLTGHTKWITWICWEPLHLNPEC 208

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             +   S ++G  +++   +     ++I      S     W   G  + +T        +
Sbjct: 209 RYLA-SSSKDGSVRIW--DTVLCRCEKILTGHTQSVTCVKWGGDG--LLYTSSQDRTVKV 263

Query: 374 G 374
            
Sbjct: 264 W 264



 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 32/110 (29%), Gaps = 10/110 (9%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            A  R T++L  +  A    ++SP    +   S   G   +             ++    
Sbjct: 93  RAVARCTSSLQGHTEAVISTAFSPTGKYLASGS---GDTTVRFWDLTTETPLYTARGHTH 149

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                 WSP G  +A      +   I +       +       + +  TW
Sbjct: 150 WVLSIAWSPDGKKLA---SGCKNSQICLWDPATGTQLGRTLTGHTKWITW 196


>gi|87308170|ref|ZP_01090312.1| WD40 repeat protein [Blastopirellula marina DSM 3645]
 gi|87289252|gb|EAQ81144.1| WD40 repeat protein [Blastopirellula marina DSM 3645]
          Length = 844

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 58/386 (15%), Positives = 125/386 (32%), Gaps = 61/386 (15%)

Query: 49  SIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ-----DW 103
            +A   F    E G     +V++D++ S +++L++         N D +P+ +      W
Sbjct: 54  GLALDSFGKSMEGGSSGEVIVAQDIESSRLWDLVAHIDTPAMPPNQDKLPQPKLDLIKAW 113

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
             +GA +  +G   K+              K   ++ G      P     +         
Sbjct: 114 IEMGA-LENSGSTAKKSN------------KPSLKMAGPTTTGKPEGPAAMP-------- 152

Query: 164 QSITGEKGDFNSRILFVSESVVSG-------IIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           +++  E   +  R   VS    S          +  + + + D   +  + P  + I + 
Sbjct: 153 ENVWREPIVYTDRAAAVSSIATSPWAPLAAVAGQKQISLYNTDNGQLLGILPYPEGIAYI 212

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            RFS N + +            V L + R  +   ++G+   ++LA   + +  R  +  
Sbjct: 213 LRFSRNGELLLAGGGRGAHSGTVVLYEVRTGKRLMKLGDELDVVLAADINPSLTRVAL-- 270

Query: 277 QKDEAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                  I  +      +    +        +  YSPD   +    DR     L+V +++
Sbjct: 271 --GGPQKIIRIYSTEDGSLLHEIKKHTDWVTALEYSPDGVLLA-SGDRA--NGLFVWEAD 325

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--------------- 379
            + +    Q  +A+     W    +++A +        +  M +                
Sbjct: 326 AAQEYLNLQGHKAAITAVSWRGDSNVLA-SASEDSAVKLWEMNEGKTIKSFNAHGGGTEC 384

Query: 380 ---GSQERLLVEDSNLQAPTWSPSGR 402
              G   RL     +  A  +S  G+
Sbjct: 385 VRFGQDGRLATAGRDRFAKVFSGDGK 410


>gi|321469834|gb|EFX80813.1| hypothetical protein DAPPUDRAFT_318247 [Daphnia pulex]
          Length = 762

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 19/169 (11%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
           +  R  + I   +  ++  +++ +G   L S + D  + I+S   +S       T     
Sbjct: 97  KSGRTERVIDAHKGAVMNAKWNHDGTSLLTSGE-DGQLKIWS---RSGMLRSTHTQADSP 152

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             SA +SP S+ +++ S     + + +     + +    +  ++      WS   +LIA 
Sbjct: 153 IYSAVWSPFSTGVLYSS----GKLMTIQSFATTSKTLQWKAHDSVVLVVAWSSISNLIA- 207

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSR 408
           +      F I      G   +LL        P     WSP G    F+ 
Sbjct: 208 SGSEDCHFKIW--DPVG---QLLFNSDPRLHPITSIAWSPDGAFCAFTT 251



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 22/182 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L +  R G  +R      D  ++   +SP    V Y++     ++ +    T       
Sbjct: 132 QLKIWSRSGM-LRSTHTQADSPIYSAVWSPFSTGVLYSS---GKLMTIQSFATTSKTLQW 187

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---- 307
           +     S++L   +SS       S  +D    I+  D       +L       +      
Sbjct: 188 K--AHDSVVLVVAWSSISNLIA-SGSEDCHFKIW--DPVG----QLLFNSDPRLHPITSI 238

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD +   F +       + V  + GSD    S + +       WSP+G  +     +
Sbjct: 239 AWSPDGAFCAFTTFSS----VCVSSAYGSDILEGSMEGDGISSVC-WSPEGSQLVVGNST 293

Query: 368 GE 369
           G 
Sbjct: 294 GR 295



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/116 (13%), Positives = 40/116 (34%), Gaps = 6/116 (5%)

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
             Y +         +       ++A ++ D + ++  S  +G+ +++   S     +   
Sbjct: 91  KCYIMHKSGRTERVIDAHKGAVMNAKWNHDGTSLL-TSGEDGQLKIW---SRSGMLRSTH 146

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
              ++  +  VWSP    + ++   G+   I          +    DS +    WS
Sbjct: 147 TQADSPIYSAVWSPFSTGVLYSS--GKLMTIQSFATTSKTLQWKAHDSVVLVVAWS 200


>gi|284052436|ref|ZP_06382646.1| WD-40 repeat protein [Arthrospira platensis str. Paraca]
          Length = 664

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 8/102 (7%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            D +++   FSP+ + +A ++ D+     + L D R     +        +    FS +G
Sbjct: 571 HDHLIWRVTFSPDGEYIATSSNDN----TIKLWDKR-GNLLQVFAGHEGDVFDVAFSPDG 625

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +    S   D+   I++VD   N    L+       + ++SP
Sbjct: 626 QFLA-SASLDKTAKIWTVD--GNLVTTLSLHKNGVRAIAFSP 664



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRS 403
            +   +   +SP G+ IA +        I +  K G+  ++    + ++    +SP G+ 
Sbjct: 571 HDHLIWRVTFSPDGEYIATSSNDNT---IKLWDKRGNLLQVFAGHEGDVFDVAFSPDGQF 627

Query: 404 LIFSRKKDGDTGSKLYSIDLN 424
           L  +     D  +K++++D N
Sbjct: 628 LASASL---DKTAKIWTVDGN 645



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 8/93 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD   I   S+      + +    G +  ++    E   FD  +SP G  +A     
Sbjct: 579 TFSPDGEYIATSSN---DNTIKLWDKRG-NLLQVFAGHEGDVFDVAFSPDGQFLASASLD 634

Query: 368 GEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
                I  +  DG+    L    + ++A  +SP
Sbjct: 635 KTA-KIWTV--DGNLVTTLSLHKNGVRAIAFSP 664



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 57/131 (43%), Gaps = 18/131 (13%)

Query: 137 KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           KQ + + FF +    R +AH   D +   +T     F+    +++ S       N++ + 
Sbjct: 552 KQTVSRAFFRADEFNRIVAH---DHLIWRVT-----FSPDGEYIATSSND----NTIKLW 599

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D+ G N+  +    +  +F+  FSP+ Q +A A+ D     +++ +D         +   
Sbjct: 600 DKRG-NLLQVFAGHEGDVFDVAFSPDGQFLASASLD--KTAKIWTVD---GNLVTTLSLH 653

Query: 257 RSMILAPRFSS 267
           ++ + A  FS 
Sbjct: 654 KNGVRAIAFSP 664



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 39/105 (37%), Gaps = 7/105 (6%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           RI     +I    FS +G+    +   D  + ++  D + N  +            ++SP
Sbjct: 567 RIVAHDHLIWRVTFSPDGEYIA-TSSNDNTIKLW--DKRGNLLQVFAGHEGDVFDVAFSP 623

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           D   +   S  +   +++ +  +G+    +S  K        +SP
Sbjct: 624 DGQFLASASL-DKTAKIWTV--DGNLVTTLSLHKNG-VRAIAFSP 664


>gi|168705029|ref|ZP_02737306.1| probable WD-40 repeat regulatory protein [Gemmata obscuriglobus UQM
           2246]
          Length = 757

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/256 (17%), Positives = 85/256 (33%), Gaps = 22/256 (8%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVA 227
           +GD  ++  F      + +      V   D    R +         ++    +P+ +  A
Sbjct: 450 RGDSANQWAFAPGGRRALVASGDRSVRYYDVEARRDIKRLVGHTASVWAVALTPDGKFAA 509

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-S 286
               D          D        R  +  S++ A  F+ NGK  + S   D ++  + +
Sbjct: 510 SGGMDG----TARAWDLTTGLESARFDDHTSLVSAVAFAPNGKWIV-SGSFDGSVVYWKT 564

Query: 287 VDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           V+ Q     E+L     I +         Q  F +       + +  +NG + KR     
Sbjct: 565 VNGQEGWRAEKLGLVTAIAVDP-------QGAFVAVTTPSALVLLNLANGREFKR-YGTF 616

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            A       SP G  IA     G  + I  + ++ ++  L   +  +++      GR +I
Sbjct: 617 AAPLSAVAISPNGKWIAAGNDLGTVY-IWQVGEEEARFTLTGHEGGVRSVAI-KDGRWVI 674

Query: 406 FSRKKDGDTGSKLYSI 421
                  D   +L+  
Sbjct: 675 ---TGGTDRTLRLWDT 687


>gi|145499449|ref|XP_001435710.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402844|emb|CAK68313.1| unnamed protein product [Paramecium tetraurelia]
          Length = 330

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/310 (16%), Positives = 104/310 (33%), Gaps = 47/310 (15%)

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           +  RLWD+K   Q +               HT +  +        G           ++V
Sbjct: 1   MSIRLWDLKTGSQKVKLD-----------GHTRA--VNSICFSPDGI----------TLV 37

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + +    +           +    FS +   +A ++ D+     + L D +
Sbjct: 38  SGGRDKTIRLWNVKTESQIGKLDGHTSEVDSICFSSDGTTLASSSSDN----TIRLWDVK 93

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +   +I   +  + +  FSS+G +       DE++ ++ V +  +  E   +   I I
Sbjct: 94  TGQQKAKIDCHQYSVSSVCFSSDGTKLAYD-NLDESICLWDVKIGQSMLEFKGHEDPI-I 151

Query: 306 SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S  +SP+ + +   S DR     + +       QK       +      +SP        
Sbjct: 152 SVCFSPEDTTLASGSWDRS----IRLWDVKTGQQKAKLDGHSSVVRSVSFSPD----VLI 203

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             S      G++++D  Q   ++    L    +SP G +L       G     +   D+ 
Sbjct: 204 TLS----VYGMLRQDHKQPNQVIIKIRLILSVYSPDGTTLA-----SGSADESIRLWDVK 254

Query: 425 GRNETLINTP 434
              E L    
Sbjct: 255 SGQEKLTQNN 264


>gi|71015461|ref|XP_758809.1| hypothetical protein UM02662.1 [Ustilago maydis 521]
 gi|46098599|gb|EAK83832.1| hypothetical protein UM02662.1 [Ustilago maydis 521]
          Length = 901

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 55/172 (31%), Gaps = 5/172 (2%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            D  ++ L +T             + +    F+  G + L S   D  +  Y + ++   
Sbjct: 379 GDDGKIKLWNTASGFCTATFSEHSASVSCIEFAKQG-QVLFSASLDGTVRAYDL-VRYRN 436

Query: 294 TERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              LT+   +  +S +  P     V  +      ++Y+          I    E      
Sbjct: 437 FRTLTSPEPVQFVSLAVDPSGE--VVCAGSADTFEIYMWSVQTGKLLDILSGHEGPVSGL 494

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            +SP G  +  +    +      + +       L  +++  A  + P GR +
Sbjct: 495 CFSPDGSGVLASVSWDKTVRTWEVFRTTQSVETLTLNADGLAVAFRPDGREI 546



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 51/272 (18%), Positives = 85/272 (31%), Gaps = 41/272 (15%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           FN I   S  Q+     +I    +W + GA  L           +L V    W+      
Sbjct: 307 FNPIHTLSISQEKITSVAINDSGEWLAFGAHRL----------GQLLV----WEWASESY 352

Query: 139 IIGKKF------FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS----GI 188
           I+ ++           AS   +A T  DD    +      F +       + VS      
Sbjct: 353 ILKQQGHYYDMNTVGFASDGAVAATGGDDGKIKLWNTASGFCTATFSEHSASVSCIEFAK 412

Query: 189 IKNSLCVMDRDGA----------NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
               L     DG           N R LT             P+ + V        D   
Sbjct: 413 QGQVLFSASLDGTVRAYDLVRYRNFRTLTSPEPVQFVSLAVDPSGEVVC---AGSADTFE 469

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +Y+   +  +    +      +    FS +G   L SV  D+ +  + V   + + E LT
Sbjct: 470 IYMWSVQTGKLLDILSGHEGPVSGLCFSPDGSGVLASVSWDKTVRTWEVFRTTQSVETLT 529

Query: 299 -NTLFINISASYSPDSSQIVFESDREGKEQLY 329
            N   + +  ++ PD  +I   S  +G    +
Sbjct: 530 LNADGLAV--AFRPDGREIC-ASTLDGYLAFF 558


>gi|331246336|ref|XP_003335801.1| hypothetical protein PGTG_17338 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309314791|gb|EFP91382.1| hypothetical protein PGTG_17338 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 599

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 10/185 (5%)

Query: 208 PSRDQILFEPRFSPNQQKV-AYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPR 264
             R  +L    FSPN Q V A        ++ +Y ++     A  +IG         A R
Sbjct: 106 DRRPPLLTSISFSPNSQYVCALLRQTTTSVVSIYSIEADQLAAQIKIGAEGVAGGDKAIR 165

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDR 322
           +S +G   ++    +  + I+ +        +L +      +I +S+SP          +
Sbjct: 166 WSPSGCSLMVWSDWNLRVTIWPLSNSQPKPVQL-HHPKHGPHIGSSFSPTGRYFALLCRQ 224

Query: 323 EGKEQLYVMQSNGSDQKRIS-QDKEASYFDP---VWSPQGDLIAFTKFSGEKFAIGVMKK 378
            G     V   +       S     A   DP    WSP G  +A  + +   + + +   
Sbjct: 225 PGNFHDCVSIYDTITWTCASLFQLSAELVDPTHLHWSPCGRYLAIVESALLDYRVEIWSP 284

Query: 379 DGSQE 383
            G++ 
Sbjct: 285 TGAKL 289



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 59/178 (33%), Gaps = 17/178 (9%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--------S 308
             ++ +  FS N +     +++     +    ++    ++L   + I             
Sbjct: 109 PPLLTSISFSPNSQYVCALLRQTTTSVVSIYSIE---ADQLAAQIKIGAEGVAGGDKAIR 165

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SP    ++  SD   +  ++ + ++     ++   K   +    +SP G   A      
Sbjct: 166 WSPSGCSLMVWSDWNLRVTIWPLSNSQPKPVQLHHPKHGPHIGSSFSPTGRYFALLCRQP 225

Query: 369 EKFA--IGVMKKDG----SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             F   + +         S  +L  E  +     WSP GR L        D   +++S
Sbjct: 226 GNFHDCVSIYDTITWTCASLFQLSAELVDPTHLHWSPCGRYLAIVESALLDYRVEIWS 283


>gi|188581543|ref|YP_001924988.1| WD-40 repeat protein [Methylobacterium populi BJ001]
 gi|179345041|gb|ACB80453.1| WD-40 repeat protein [Methylobacterium populi BJ001]
          Length = 335

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 70/177 (39%), Gaps = 16/177 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G R + S   D  +     D +S+   R     +I+  A    D S + F S R     
Sbjct: 65  DGTRLV-SGGDDGRIVATEADGRSSELARAKGGGWIDALA-LHADGS-VAFASGRT---- 117

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +    + G ++   +    ++     ++P+G  +A   ++G   ++     +   E +  
Sbjct: 118 VVARDAKGREK---TFAAPSTGRGLAFAPKGYRLAVAHYNG--VSLWYPNLETPPEFIEW 172

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           + S+L   TWSP GR ++ + +++   G   + +  +  +  +   PA      W  
Sbjct: 173 KGSHLDV-TWSPDGRFVVSTMQENALHG---WRLQPDRGHMRMSGYPAKVRSLSWSA 225



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 27/211 (12%), Positives = 61/211 (28%), Gaps = 20/211 (9%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           ++ RDGA           IL     + +  ++        D  R+   +     +     
Sbjct: 41  LLARDGATETVAAHPDSGILVA---AGDGTRLV----SGGDDGRIVATEADGRSSELARA 93

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                I A    ++G     +  +        V   +   E+           +++P   
Sbjct: 94  KGGGWIDALALHADG-SVAFASGRT------VVARDAKGREKTFAAPSTGRGLAFAPKGY 146

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++              +     +      + + S+ D  WSP G  +  T          
Sbjct: 147 RLAVA-----HYNGVSLWYPNLETPPEFIEWKGSHLDVTWSPDGRFVVSTMQENALHGWR 201

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +   D    R+    + +++ +WS  G+ L 
Sbjct: 202 LQ-PDRGHMRMSGYPAKVRSLSWSADGKWLA 231


>gi|209546640|ref|YP_002278558.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209537884|gb|ACI57818.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 624

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 53/133 (39%), Gaps = 11/133 (8%)

Query: 41  NSANYSPVSIAFTKFVSIDELGGK------VSEVVSKDLQR-SDVFNLISQDSFKQKITN 93
             A  +  S+A   F +I +   +      ++E +  DL   S +F ++S+++       
Sbjct: 192 TQAPLNKPSVAILPFANISDDPAQEFFSDGITEDIITDLSNVSGLF-VLSRNTVFTWKGR 250

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
            +++ R      LG   +V G V K G + +R+   L D      +   ++        +
Sbjct: 251 SENLQRIA--RELGVAYVVEGSVRKAG-NHVRINAELIDAASDGHVWAARYDRDLTDIFE 307

Query: 154 IAHTISDDIYQSI 166
           +   I+  I + +
Sbjct: 308 VQDEITKAIVEQL 320


>gi|319425019|gb|ADV53093.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           putrefaciens 200]
          Length = 760

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/289 (14%), Positives = 84/289 (29%), Gaps = 85/289 (29%)

Query: 220 SPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------------- 264
           SP+ Q+V Y     D+++   ++ MD +  ++   +   +                    
Sbjct: 66  SPDGQRVTYLAGRKDNQNFYDLWQMDVKTGKSSLLLSADKLASNELSDEEKARRERQRIY 125

Query: 265 --------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                   ++ + K  LI    +    +Y   L  N   +L+        A  SP  + +
Sbjct: 126 GEGIMEYFWADDSKALLIPASGN----LYYFSLVDNRVSQLSIGEGFATDARLSPKGNFV 181

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQGDL 360
            F  D    + LYV+       + ++ D   +  + +                W+P    
Sbjct: 182 SFVRD----QNLYVLDLATKKLEAMTTDGGGAIKNAMAEFVAQEEMDRMTGYWWAPDESA 237

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-------------------------- 394
           IAFT+       +    +  +    L E     A                          
Sbjct: 238 IAFTRIDESGVELVTRNEIYADGIKLTEQRYPYAGKNNVDIALGVVTLKDKAINWVTLND 297

Query: 395 --------PT--WSPSGRSLIF--SRKKDGDTGSKLYSIDLNGRNETLI 431
                   P   W P  R L F    +       +L ++D   + +TL+
Sbjct: 298 DKSKDIYLPRVNWLPDSRHLSFQWQSRDQHKLDLQLVALDALTKPKTLV 346



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/195 (12%), Positives = 60/195 (30%), Gaps = 57/195 (29%)

Query: 261 LAPR---FSSNGKRALISVQKDEA---MDIYSVDLQSNA--------------------- 293
            +PR    S +G+R      + +     D++ +D+++                       
Sbjct: 58  TSPRGLKLSPDGQRVTYLAGRKDNQNFYDLWQMDVKTGKSSLLLSADKLASNELSDEEKA 117

Query: 294 --TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               +      I +   ++ DS  ++  +       LY      +   ++S   E    D
Sbjct: 118 RRERQRIYGEGI-MEYFWADDSKALLIPA----SGNLYYFSLVDNRVSQLS-IGEGFATD 171

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQ 393
              SP+G+ ++F +       + V+     +   +  D                    + 
Sbjct: 172 ARLSPKGNFVSFVRDQ----NLYVLDLATKKLEAMTTDGGGAIKNAMAEFVAQEEMDRMT 227

Query: 394 APTWSPSGRSLIFSR 408
              W+P   ++ F+R
Sbjct: 228 GYWWAPDESAIAFTR 242



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 97/311 (31%), Gaps = 66/311 (21%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR----------DGANI--- 203
           ++ D+    ++  +G      L    + VS +   +L V+D           DG      
Sbjct: 153 SLVDNRVSQLSIGEGFATDARLSPKGNFVSFVRDQNLYVLDLATKKLEAMTTDGGGAIKN 212

Query: 204 ---RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL-----RVYLMDTRIDRAPKRIGN 255
               ++       +    ++P++  +A+   D+  +       +Y    ++         
Sbjct: 213 AMAEFVAQEEMDRMTGYWWAPDESAIAFTRIDESGVELVTRNEIYADGIKLTEQRYPYAG 272

Query: 256 FRSMILA--------------------------PR--FSSNGKRALISVQKDEAMDIYSV 287
             ++ +A                          PR  +  + +      Q   + D + +
Sbjct: 273 KNNVDIALGVVTLKDKAINWVTLNDDKSKDIYLPRVNWLPDSRHLSFQWQ---SRDQHKL 329

Query: 288 DLQSNATERLTNTL-----------FINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           DLQ  A + LT               +N    +    S  ++ S+R+G   LY+    G 
Sbjct: 330 DLQLVALDALTKPKTLVKERSEAWVNLNNDLHFLKQQSAFIWASERDGFNHLYLFDLKGK 389

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQA 394
            + ++++ + A             + FT          +  +   G +   +   + +  
Sbjct: 390 LKTQLTKGEWAVDKLEYVDETAGWVYFTGRKDTPIEKQLYRVPLAGGKIERVSTKAGMHD 449

Query: 395 PTWSPSGRSLI 405
           P ++   +S+ 
Sbjct: 450 PVFA-DNQSVY 459


>gi|120404563|ref|YP_954392.1| YVTN beta-propeller repeat-containing protein [Mycobacterium
           vanbaalenii PYR-1]
 gi|119957381|gb|ABM14386.1| 40-residue YVTN family beta-propeller repeat protein [Mycobacterium
           vanbaalenii PYR-1]
          Length = 1056

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 74/213 (34%), Gaps = 16/213 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-LISV 276
             SP   +V     DD  + ++  +  ++      +G   S I     S +G     ++ 
Sbjct: 328 AVSPGGTRVYVVNSDDGTVSKISTLTNKVVGTVYGVGKGVSTI---TVSPDGATIYALNG 384

Query: 277 QKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              E     +  L +     +T     I    ++S D S+ VF +D  G   + V+ ++ 
Sbjct: 385 TTGEISHFSAASLFAGKITGVTPGSQGI----TFSTDGSR-VFVADLAGS--VKVIDTDS 437

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ-A 394
            +          + FD   SP G  +   +    K ++  +        ++     +  A
Sbjct: 438 HEVVDSIILATGAPFDLAVSPDGTTLFVARSGDGKLSVYDIATKTELTSIVANPYLVDGA 497

Query: 395 PTW--SPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           PT   SP G  L ++     D    +  +  NG
Sbjct: 498 PTISASPDGTQLYWT-DSGSDRVHVIALLAPNG 529



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 57/175 (32%), Gaps = 25/175 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS +  +V  A         V ++DT        I            S +G    ++  
Sbjct: 413 TFSTDGSRVFVADL----AGSVKVIDTDSHEVVDSIILATGAPFDLAVSPDGTTLFVARS 468

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASY--SPDSSQIVFE---SDR---------- 322
            D  + +Y +  ++  T  + N   ++ + +   SPD +Q+ +    SDR          
Sbjct: 469 GDGKLSVYDIATKTELTSIVANPYLVDGAPTISASPDGTQLYWTDSGSDRVHVIALLAPN 528

Query: 323 ----EGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                G   +    ++G  +    ++  +       V +P    +  ++     F
Sbjct: 529 GDPVAGTPVVNAPNASGAVTGSVTVTDPEGRPLTYTVSTPDKGAVTVSRGENGDF 583


>gi|307729072|ref|YP_003906296.1| 6-phosphogluconolactonase [Burkholderia sp. CCGE1003]
 gi|307583607|gb|ADN57005.1| 6-phosphogluconolactonase [Burkholderia sp. CCGE1003]
          Length = 436

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 53/362 (14%), Positives = 104/362 (28%), Gaps = 55/362 (15%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-- 137
           ++++  +F Q   +             G   L+ G       + L V +R +D K  +  
Sbjct: 52  SIVASSAFAQDAGSGAVPAD-------GVYDLLVGTYTSGKSEGLYV-YR-FDTKTGEAT 102

Query: 138 -----QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
                Q +   +       R +           + G+ G    R    +    +   + +
Sbjct: 103 RVSVAQTVNPSYLVVSRDRRFV------YAVNELPGDNGPATQRGGISAFRFDAASGQLT 156

Query: 193 -LCVMDRDGANIRYLTPSRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRI 246
            L  +  DG +  YL+ S D   L    +S    P      +    D  +    L     
Sbjct: 157 FLNKVSADGNDPCYLSLSPDGKYLLAANYSVAADPGGSFAVFPVAADGQLGASVLTVHHE 216

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLFI 303
              P +     S + +  FS++GK      Q   A  +YS       S      T+  + 
Sbjct: 217 GGGPVKGRQDNSHVHSTVFSADGKYLF--AQDLGADKLYSYRYTPDGSRGLFGPTDWRYT 274

Query: 304 NISA-------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--------QDKEAS 348
                       +  D       S+      +     +     ++               
Sbjct: 275 PQKPGSGPRHLVFGADGKHAYLTSELAAT--VTTFNYDDGKLTQVQTVSLTEPGFKGAVG 332

Query: 349 YFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQERLL-VEDSNLQAPT-WS--PSGRS 403
                 SP G  +  T      +  I  +       + +  + S  +AP  ++  P+G+ 
Sbjct: 333 AAAIHLSPDGRFLYATNRGDANEIVIFSVDPANGHLKKIGHQSSLGKAPREFAIDPTGKW 392

Query: 404 LI 405
           LI
Sbjct: 393 LI 394


>gi|238550147|ref|NP_001154809.1| dipeptidyl-peptidase 4 [Danio rerio]
 gi|197245546|gb|AAI68467.1| Acta1 protein [Danio rerio]
 gi|220673183|emb|CAX13827.1| novel protein similar to H.sapiens DPP4, dipeptidyl-peptidase 4
           (DPP4) [Danio rerio]
          Length = 742

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/286 (14%), Positives = 80/286 (27%), Gaps = 27/286 (9%)

Query: 162 IYQSITGEKGDFN-----SRILFVSESVVSGIIKNSLCVMD--RDGANIRYLTPSRDQIL 214
           + Q I      F+      R      S  + + +++        D     ++       +
Sbjct: 87  VNQQIFARVAAFDYLVSADRKYVCFLSNYTKLWRHTYTASYSIYDLEKRDFINTDIPHDV 146

Query: 215 FEPRFSPNQQKVAYAT----YDDEDILRVYLMDTRIDRAPKRIGNFR---------SMIL 261
               +SP   K+A+      Y  E     +   T        +             S   
Sbjct: 147 QYLAWSPTGHKLAFVWKYNVYVKETPNSAFKQVTTNGAHNLILNGVPDWVYEEEMFSTNS 206

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           A  +S NG+    +   D  +               T  +    + + +P     VF+++
Sbjct: 207 ALWWSPNGRFVAYAEFNDSEVHNIEYTWFGEGQYPETVFVPYPKAGTPNPTVKLFVFDTN 266

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
               +Q+ V    G+ +  +S    AS        Q     +       F  G    +GS
Sbjct: 267 TNTIKQVSVPSDVGAGEHYLSTVTWASDHRIAVQWQKRTQNYVVLETYDFNDGNW-TEGS 325

Query: 382 QERLLVEDSNL------QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +++   +          P + P G S  +    D       Y I
Sbjct: 326 LSQIITSSTGWVGRFSPDEPVFRPDGNSCYYILSNDERFKHLAYFI 371


>gi|194385880|dbj|BAG65315.1| unnamed protein product [Homo sapiens]
          Length = 443

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/329 (13%), Positives = 89/329 (27%), Gaps = 59/329 (17%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           TG+ +  G     V F  WD+   KQ+ G+                       ++ E   
Sbjct: 125 TGKYLASGSGDTTVRF--WDLSTGKQV-GRTLAGHSKW------------ITGLSWEPLH 169

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-------QK 225
            N    +V+ S   G ++    + D        +     Q +   R+  +         +
Sbjct: 170 ANPECRYVASSSKDGSVR----IWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQDR 225

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGN---FRSMILAPR------------------ 264
                   + +L   L           +      R+    P                   
Sbjct: 226 TIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSLQELKE 285

Query: 265 --------FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                       G   L+S   D  + ++S         R+T    +     +SPDS  +
Sbjct: 286 RALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIV 345

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              S     + + +      +     +   A+ +   WS    L+  +  S     +  +
Sbjct: 346 ASASF---DKSIKLWDGRTGEYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDV 401

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           K       L      + A  WSP G+ + 
Sbjct: 402 KAQKLAMDLPGHADEVYAVDWSPDGQRVA 430



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 47/154 (30%), Gaps = 16/154 (10%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFI 303
           + R    +      +++  FS  GK    S   D  +  +  DL +       L      
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFW--DLSTGKQVGRTLAGHSKW 159

Query: 304 NISASY-----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               S+     +P+   +   S ++G  +++   +     +RI      S     W   G
Sbjct: 160 ITGLSWEPLHANPECRYVA-SSSKDGSVRIW--DTTAGRCERILTGHTQSVTCLRWGGDG 216

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             + ++        +     DG   R L    + 
Sbjct: 217 --LLYSASQDRTIKVWRAH-DGVLCRTLQGHGHW 247



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 61/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 260 RTGAFEPAEASVNPQDLQGSLQELKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 316

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 317 AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 354

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG    YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 355 KLW--DGRTGEYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAM 408

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 409 DLPGHADEVYAVDWSPDGQRVA 430


>gi|307175816|gb|EFN65631.1| WD40 repeat-containing protein SMU1 [Camponotus floridanus]
          Length = 510

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 66/177 (37%), Gaps = 18/177 (10%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---------ISA 307
           +S +   RFS +G+  + +   D  ++++  +  +    +       +         +S 
Sbjct: 214 KSHVECARFSPDGQFLV-TGSVDGFIEVW--NFTTGKIRKDLKYQAQDNFMMMEQAVLSM 270

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+S DS  +     ++GK +++ +  NG   +R  +          +S     I    F 
Sbjct: 271 SFSRDSEMLA-GGGQDGKIKVWKV-QNGQCARRFEKAHSKGVTCLQFSRDNSQILSASFD 328

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                I  +K   + +      S +    +SP G ++I +     D   K++S+   
Sbjct: 329 -TTVRIHGLKSGKTLKEFRGHTSFVNEVVFSPDGHNIISASS---DGTVKIWSLKTT 381



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 60/185 (32%), Gaps = 18/185 (9%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                 K  +  + ++G   R    +  + +   +FS +  ++  A++D      V +  
Sbjct: 281 GGGQDGKIKVWKV-QNGQCARRFEKAHSKGVTCLQFSRDNSQILSASFDT----TVRIHG 335

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTL 301
            +  +  K      S +    FS +G    IS   D  + I+S+         + L    
Sbjct: 336 LKSGKTLKEFRGHTSFVNEVVFSPDGHNI-ISASSDGTVKIWSLKTTECIGTYKSL--GA 392

Query: 302 FINISASYSP---DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSP 356
                 S  P   +    V          + +M   G   +  S  K     +   V SP
Sbjct: 393 ADLTVNSIHPLPRNPEHFVVC---NRSNTVVIMNMQGQIVRSFSSGKREGGDFVCTVVSP 449

Query: 357 QGDLI 361
           +G+ I
Sbjct: 450 RGEFI 454


>gi|262384021|ref|ZP_06077157.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262294919|gb|EEY82851.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 827

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/339 (12%), Positives = 101/339 (29%), Gaps = 72/339 (21%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF----------------SSPASWR 152
             +VT  +  E        + L DV D K+I                         +S+ 
Sbjct: 168 DAVVTATINPEK------RYTLSDVFDGKRIQSASLSPNGKFIIVSYQETYPGGKQSSFT 221

Query: 153 KIAHTIS-DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           +I    +   ++++    +    S + + +   + G    +L     D  N +    +  
Sbjct: 222 QILDKATGSVLFENGQSLRWMPKSNLAYYTRKGMKGTELVTL-----DPTNKKENILASQ 276

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------------------- 251
                  F P +  + ++  +     R  + +  +    +                    
Sbjct: 277 LPEGSFSFGPTEDYLLFSIREKGPQERKEIQEILVPDDRQPGWRNRMFIHKYDLRTGLFQ 336

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLTNTLFIN 304
           R+    +       S +G   L S ++            IY +DL++   + L       
Sbjct: 337 RLTYGHTSTYINDISQDGHYLLFSRREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFV 396

Query: 305 ISASYSPDSSQI-------VF----------ESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             A +SPD++Q+        F          ++      QL++        K +++D + 
Sbjct: 397 SRAVFSPDATQLLVDASGEAFDGIGLKIKEGQTSNTSDGQLFLYNIADKSIKPLTKDFDP 456

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           S     W+     I  T    ++  +  +     + + L
Sbjct: 457 SVDSYKWNALDKQIYITAKDKDRVRMYSLNPSNGKIKQL 495



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 46/282 (16%), Positives = 92/282 (32%), Gaps = 45/282 (15%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           K  FN     V  + ++   + +L  +  DG  I+               SPN + +  +
Sbjct: 160 KASFNPEKDAVVTATINPEKRYTLSDV-FDGKRIQSA-----------SLSPNGKFIIVS 207

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
             +     +       +D+A   +       L  R+      A  + +  +  ++ ++D 
Sbjct: 208 YQETYPGGKQSSFTQILDKATGSVLFENGQSL--RWMPKSNLAYYTRKGMKGTELVTLDP 265

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +N  E +  +     S S+ P    ++F S RE   Q         ++K I +      
Sbjct: 266 -TNKKENILASQLPEGSFSFGPTEDYLLF-SIREKGPQ---------ERKEIQEILVPDD 314

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSR 408
             P W               +  I          + L    ++      S  G  L+FSR
Sbjct: 315 RQPGW-------------RNRMFIHKYDLRTGLFQRLTYGHTSTYINDISQDGHYLLFSR 361

Query: 409 KKDG-----DTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
           ++        + + +Y +DL     +TLI    + S   +  
Sbjct: 362 REPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFVSRAVFSP 403


>gi|260554693|ref|ZP_05826914.1| 3-carboxymuconate cyclase [Acinetobacter baumannii ATCC 19606]
 gi|260411235|gb|EEX04532.1| 3-carboxymuconate cyclase [Acinetobacter baumannii ATCC 19606]
          Length = 432

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 80/275 (29%), Gaps = 45/275 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF------ 256
              S          S + + +    Y+ +D        L         + + N       
Sbjct: 159 TVNSHGGHPTHASISLDGKFLFVSNYSAFDKGRGGVAVLPILPNGHLGEMVQNIVFSEGS 218

Query: 257 --------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-- 306
                        +  FS +GK    S   ++ +  +  +      + L      ++S  
Sbjct: 219 GHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYNPS--KPQPLEADKSRDVSFK 276

Query: 307 -------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------QDKEASYF 350
                    +SP+  Q    ++   + ++          K+++           +  S  
Sbjct: 277 HGSGPRHMVFSPNGKQAYITAEM--RSEIVTFNVQDGHLKKVAELKLVHEDKTPEFKSAS 334

Query: 351 DPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS--GRSLIF 406
             + SP G   IA  + +  K  +  ++++G   +  V  +N   P  +S    G+ L  
Sbjct: 335 GIILSPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGIEPRAFSFDESGKYLYV 394

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +          L+  D    +   +   A  S P 
Sbjct: 395 TNVYSN--NISLFRFDTKNGSLKPLGDAAKISTPT 427


>gi|195487743|ref|XP_002092030.1| GE11895 [Drosophila yakuba]
 gi|194178131|gb|EDW91742.1| GE11895 [Drosophila yakuba]
          Length = 343

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 72/212 (33%), Gaps = 22/212 (10%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  I+         +   +FSP+ + +  ++ D      + L D    R  + +      
Sbjct: 44  GYAIKSSLLGHSGCVTGVKFSPDGENLVSSSADK----LLKLWDISATRCIQSLAGHEHG 99

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVF 318
           +    +S+ G   L S   D+ + ++  D +S    + L      + S  ++P ++ +  
Sbjct: 100 VNDVAWSAAG--LLASCSDDKTVRLW--DTRSQRCVKALEGHSNFSFSCCFNPQANLLAT 155

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E + +         +I    +       ++  G     +   G    + +   
Sbjct: 156 TSF---DETVRLWDVRTGKTLKIVTAHQDPVTSVDFNRDGSCFVTSSIDG---LVRLWDS 209

Query: 379 DGS-QERLLVEDSNLQAPT----WSPSGRSLI 405
                 + LV+      P     +SP+GR ++
Sbjct: 210 STGHALKTLVD--VDNIPVGYVKFSPNGRYIL 239



 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 62/188 (32%), Gaps = 9/188 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E++VS      L + D             +  + +  +S     +A  + D      V L
Sbjct: 68  ENLVSSSADKLLKLWDISATRCIQSLAGHEHGVNDVAWSAAGL-LASCSDDK----TVRL 122

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            DTR  R  K +    +   +  F+        +   DE + ++ V       + +T   
Sbjct: 123 WDTRSQRCVKALEGHSNFSFSCCFNPQANLLA-TTSFDETVRLWDV-RTGKTLKIVTAHQ 180

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S  ++ D S  V  S  +G  +L+   S G   K +            +SP G  I
Sbjct: 181 DPVTSVDFNRDGSCFV-TSSIDGLVRLWD-SSTGHALKTLVDVDNIPVGYVKFSPNGRYI 238

Query: 362 AFTKFSGE 369
             +  +  
Sbjct: 239 LSSTLNNT 246


>gi|168701131|ref|ZP_02733408.1| WD-repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 285

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 74/176 (42%), Gaps = 17/176 (9%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           ++D       +R G+ R    AP    +G+   ++  +++ +  Y +   +   E    +
Sbjct: 72  VLDRNTGGEIRRFGD-RCQSFAPA--PDGRAVFVAGTRNDRLGRYDLSTGTAGAEVELAS 128

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSPQG 358
             +N  A+ S D   +       G ++ Y++ ++  +++     +   +  F    SP G
Sbjct: 129 GAVNRLAA-SSDGKWLAAV----GCKRFYLLAADTLEERASESHRALSSGSFALALSPDG 183

Query: 359 DLIAFTKFSGEKFAIGVMK--KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             + ++  +G +  +  +   ++ +  +L  +        +SP GRSL F+  K+G
Sbjct: 184 RFLVYS--AGREMFVREVPECREIAGVQLAAKP--FMDAAFSPDGRSL-FTASKEG 234



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 64/198 (32%), Gaps = 23/198 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P+   +A + Y     L   +   R+  A        S+     F  +G      + 
Sbjct: 15  AFTPDGHALALSGYYLACKLIDPITGARLWTAETNSAVGLSL----AFVPDG-----VLC 65

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +     +  +D  +    R       + + +  PD  + VF +     ++L     +   
Sbjct: 66  RQGG--LSVLDRNTGGEIRRFGDRCQSFAPA--PDG-RAVFVAG-TRNDRLGRYDLSTGT 119

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                +    +      S  G  +A            ++  D  +ER       L + ++
Sbjct: 120 AGAEVELASGAVNRLAASSDGKWLAAV----GCKRFYLLAADTLEERASESHRALSSGSF 175

Query: 398 ----SPSGRSLIFSRKKD 411
               SP GR L++S  ++
Sbjct: 176 ALALSPDGRFLVYSAGRE 193


>gi|119489362|ref|ZP_01622142.1| hypothetical protein L8106_02362 [Lyngbya sp. PCC 8106]
 gi|119454635|gb|EAW35781.1| hypothetical protein L8106_02362 [Lyngbya sp. PCC 8106]
          Length = 634

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/246 (17%), Positives = 93/246 (37%), Gaps = 23/246 (9%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            +     P  SP+ + +AY   DD+++L+V+L     +   +   + +  I A  ++ N 
Sbjct: 24  GNPERTSPSLSPDGKFLAYIAPDDKNVLQVWLRTVGEEDDRQLTADKKRGIRAFFWTYNP 83

Query: 270 KRALIS--VQKDEAMDIYSVDLQSNATERLTNTLF-----INISASYSPDSSQIVFESDR 322
            + + +     DE   +Y V++QSN    LT         +++  ++ P+   +    + 
Sbjct: 84  DQLIYAQDSDGDENWHLYLVNIQSNIVRDLTPFQGVRAQVVDLDHNF-PEELLVGMNLNN 142

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTKFSGEKFA-IGVMKK 378
                +Y +       +      E       W+         A        +  +     
Sbjct: 143 PQVFDVYHINLKTGAVE---FYTENPGNIVSWTADSQLQIRAATATTPDGGYDLLYRETP 199

Query: 379 DGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           D + + L     + +  A  +S  G++L      + +   +L + DL  R+ET+I     
Sbjct: 200 DQAWDTLRHWGPDEEGGAVYFSNDGKTLYIVGNHEANAE-RLIAFDLATRSETVI----- 253

Query: 437 ASDPQW 442
           A DPQ+
Sbjct: 254 AEDPQY 259


>gi|332212724|ref|XP_003255469.1| PREDICTED: transcription initiation factor TFIID subunit 5 isoform
           1 [Nomascus leucogenys]
          Length = 800

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 472 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 531

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 587

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 588 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 644

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 645 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 699

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILA 727



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 585 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 696

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 697 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 738


>gi|307105414|gb|EFN53663.1| hypothetical protein CHLNCDRAFT_36331 [Chlorella variabilis]
          Length = 311

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 87/254 (34%), Gaps = 31/254 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           ++    + D  ++   ++P    +   + D+   ++++            +      +L 
Sbjct: 6   LQKQESAHDDSVWAAAWAPTGNTLVTGSVDES--VKLWQEVGDTLEQQHHLVGLSLGVLG 63

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESD 321
               S+G+    +   D  + ++ +D   N   + TN         +++P S +++    
Sbjct: 64  VSVDSSGQYGA-ASSLDSYVTVWRMD-DYNTVHQFTNIPPSETWGLAFAPSSEKLLLAVA 121

Query: 322 REGKEQLYVMQSNGSDQ-KRIS-------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                 + V+     +Q  +++       Q KE       +SP G  IA     G    +
Sbjct: 122 GGSSNSVRVLDVAAKEQAAQLAMPESADKQRKEKFVLSVAYSPDGRRIAAGAMDGT---V 178

Query: 374 GVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            +        +LL        P     ++P  + +I +     D  + LY    +  +  
Sbjct: 179 ALFDAATG--KLLHTLGGHFRPVRDLAFTPDSKQVITACD---DMNAHLY----DAEHAE 229

Query: 430 LINTPAYASDPQWV 443
           LI   A++    WV
Sbjct: 230 LIE--AFSGHESWV 241



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/290 (12%), Positives = 91/290 (31%), Gaps = 29/290 (10%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC 194
               ++      S   W+++  T+    +  +    G     +    +   +  + + + 
Sbjct: 25  TGNTLVTGSVDESVKLWQEVGDTLEQQ-HHLVGLSLGVLGVSVDSSGQYGAASSLDSYVT 83

Query: 195 VMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           V   D  N +   T       +   F+P+ +K+  A         V ++D        ++
Sbjct: 84  VWRMDDYNTVHQFTNIPPSETWGLAFAPSSEKLLLAVAG-GSSNSVRVLDVAAKEQAAQL 142

Query: 254 GNFRSM--------ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
               S         +L+  +S +G+R   +   D  + ++  D  +    +L +TL  + 
Sbjct: 143 AMPESADKQRKEKFVLSVAYSPDGRRIA-AGAMDGTVALF--DAATG---KLLHTLGGHF 196

Query: 306 SA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 +++PDS Q++   D       ++  +  ++        E+        P G   
Sbjct: 197 RPVRDLAFTPDSKQVITACD---DMNAHLYDAEHAELIEAFSGHESWVLSVSPHPNGTAF 253

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRK 409
           A          + +                  + A  + P G  L+ +  
Sbjct: 254 ATGSSDS---KVKLWDLQTRTCAQTCSEHTDQVWAVRFRPDGSRLVSASD 300


>gi|302818887|ref|XP_002991116.1| hypothetical protein SELMODRAFT_269750 [Selaginella moellendorffii]
 gi|300141210|gb|EFJ07924.1| hypothetical protein SELMODRAFT_269750 [Selaginella moellendorffii]
          Length = 307

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 67/228 (29%), Gaps = 21/228 (9%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             + A       D          +D      GN   ++ A   S +G R       D  +
Sbjct: 27  GDRPAVLLTGSADESVKVWKGDELDLERTNSGNSLGVV-AVAASPDG-RVAACTSLDSVV 84

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ VD  S     L +         + P    +       G   ++   S   +    +
Sbjct: 85  RIFDVDSNSTLAT-LESKPAEAWQMQFHPKGELLAVAGGGSGCVNIWKASSGSRETSLKA 143

Query: 343 Q-----DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAP 395
           +               WSP G L+A +   G    I V      +    ++  ++  +  
Sbjct: 144 ESVDKVGGGKFVLSVAWSPDGKLLACSSMDGT---IAVFDVARGKMLHTLDGHSMPVRCL 200

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +SP     +F+   D      ++  D  GR+       A +    WV
Sbjct: 201 AFSPVEPRYLFTACDD----KHVHMYDAEGRSL----VSAMSGHASWV 240



 Score = 36.5 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 8/133 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++ V D     + +        +    FSP + +  +   DD+    V++ D        
Sbjct: 175 TIAVFDVARGKMLHTLDGHSMPVRCLAFSPVEPRYLFTACDDKH---VHMYDAEGRSLVS 231

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYS 310
            +    S +L+   S +G     S   D  + ++  DL++ +  + LT         ++ 
Sbjct: 232 AMSGHASWVLSVAGSPDGAALA-SASSDRTVRLW--DLKTRSCVQSLTEHKDQVWGVAFR 288

Query: 311 PDSSQIVFESDRE 323
           P         DR 
Sbjct: 289 P-GRLATVADDRS 300


>gi|297687314|ref|XP_002821162.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           isoform 2 [Pongo abelii]
          Length = 800

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 472 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 531

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 587

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 588 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 644

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 645 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 699

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILA 727



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 585 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 696

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 697 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 738


>gi|295132007|ref|YP_003582683.1| prolyl oligopeptidase family protein [Zunongwangia profunda SM-A87]
 gi|294980022|gb|ADF50487.1| secreted prolyl oligopeptidase family protein [Zunongwangia
           profunda SM-A87]
          Length = 720

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 93/253 (36%), Gaps = 17/253 (6%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N       R    F  + SPN   +AY    D     +YLMDT   +        + +
Sbjct: 107 GYNYSVEDYFRTPQTFAFQLSPNGDHIAYMKRRDSGERDLYLMDTETKKESLLKKQEQDL 166

Query: 260 ILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINIS--ASYSPDSSQ 315
           I    ++++ +R L    K       +Y VD+     + LT    + ++   S   D   
Sbjct: 167 IRGFSWAND-ERILYLQDKGGDENYHVYGVDINGANDKELTPFEGVRVNIIESLKEDKEH 225

Query: 316 IVFESDREGKEQ--LYVMQSNGSDQKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKF 371
           I+ + +++  +Q   Y +  N  +  ++   KE         +  +G+L A ++      
Sbjct: 226 IIIQMNKDNPQQEEPYRLNINSGEITKLYTVKEGEPPVAGYDFDREGNLRAISRIVDGVN 285

Query: 372 AIGVMKKDGS-QERLLVEDSN-LQAPTW-----SPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              + K DG  +   L E  +     ++     +P    +I S  +      +LY +  N
Sbjct: 286 TELLYKIDGEFKLVKLTEFGDEFGISSFNPGSANPDDAYVI-SNLEGDKIEIQLYDLKKN 344

Query: 425 GRNETLINTPAYA 437
            +  T+ +   Y 
Sbjct: 345 KKINTVFSNDTYD 357


>gi|332875333|ref|ZP_08443162.1| hypothetical protein HMPREF0022_02797 [Acinetobacter baumannii
           6014059]
 gi|332736437|gb|EGJ67435.1| hypothetical protein HMPREF0022_02797 [Acinetobacter baumannii
           6014059]
          Length = 432

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 80/275 (29%), Gaps = 45/275 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF------ 256
              S          S + + +    Y+ +D        L         + + N       
Sbjct: 159 TVNSHGGHPTHASISLDGKFLFVSNYSAFDKGRGGVAVLPILPNGHLGEMVQNIVFAEGS 218

Query: 257 --------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-- 306
                        +  FS +GK    S   ++ +  +  +      + L      ++S  
Sbjct: 219 GHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYNPS--KPQPLEADKSRDVSFK 276

Query: 307 -------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------QDKEASYF 350
                    +SP+  Q    ++   + ++          K+++           +  S  
Sbjct: 277 HGSGPRHMVFSPNGKQAYITAEM--RSEIVTFNVQDGHLKKVAELKLVHEDKTPEFKSAS 334

Query: 351 DPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS--GRSLIF 406
             + SP G   IA  + +  K  +  ++++G   +  V  +N   P  +S    G+ L  
Sbjct: 335 GIILSPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGIEPRAFSFDESGKYLYV 394

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +          L+  D    +   +   A  S P 
Sbjct: 395 TNVYSN--NISLFRFDTKNGSLKPLGDAAKISTPT 427


>gi|148710078|gb|EDL42024.1| TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated
           factor [Mus musculus]
          Length = 808

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 480 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 539

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 540 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 595

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 596 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 652

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 653 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 707

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 708 HGLMVGELKGHTDTVCSLRFSRDGEILA 735



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 593 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 648

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 649 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 704

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 705 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 746


>gi|139005807|dbj|BAF52623.1| hypothetical protein [Gluconobacter frateurii]
          Length = 391

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 65/188 (34%), Gaps = 12/188 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFES 320
             S + K  L+  +K   + +++V  +     + T ++  + + +   + PD    V   
Sbjct: 156 TVSPDQKWVLVGNRKSGTVSVFAVAHRQLHPVQ-TLSMGADSNPASVIFLPDGQHAVVVL 214

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
               +  L   + +G D ++   D   +      +  G LIA         A+ +++ + 
Sbjct: 215 RGPHQLALLNRRRDGFDVQKQRLDLGYAPNTMDITRSG-LIAIGDQDPVHPAVHLVRLND 273

Query: 381 SQERLLVEDSNLQAP---TWSPSGRSLIFS----RKKDGDTGSKLYSIDLNGRNETLINT 433
               LL        P    +SP GR L         KD      L    ++G    LI +
Sbjct: 274 GTLNLLGTIPVAPGPEPLRFSPDGRYLAVGAVNNSNKDPSKHGTLTLYRVDGSRLALIAS 333

Query: 434 PAYASDPQ 441
                 PQ
Sbjct: 334 ENVGRWPQ 341


>gi|127798463|gb|AAH52268.2| TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated
           factor, 100kDa [Homo sapiens]
          Length = 800

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 472 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 531

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 587

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 588 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 644

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 645 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 699

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILA 727



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 585 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 696

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 697 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 738


>gi|126272320|ref|XP_001376835.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 366

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 50/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  ++    I +V +      +    +      IL+  +S +GK    S  
Sbjct: 174 AFSPDSQFLATGSH----IGKVNIFGVETGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 228

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 229 IDGIINIFDI-ASGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 284

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 285 LAGTLSGHASWVLNVAFCPD 304



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 94/271 (34%), Gaps = 58/271 (21%)

Query: 102 DWNSLGAQV-LVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ +V+  +   G       L    RLWD+++ KQ+  K   + P        
Sbjct: 118 QWSLEGHQLGVVSVDISHTGTIAASSSLDAHIRLWDLENGKQM--KAIDAGPVD------ 169

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
                           F+    F++    +G     + +   +     Y   +R + +  
Sbjct: 170 -----------AWSLAFSPDSQFLA----TGSHIGKVNIFGVETGKKEYSLDTRGKFILS 214

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 215 IAYSPDGKYLASGAIDG----IINIFDIASGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 269

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPD------------------SSQ 315
             D  + IY V   +L       L+      ++ ++ PD                   ++
Sbjct: 270 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDIHFVSSSSDKSVKVWDAGTR 325

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
               +  + ++Q++ ++ NG+  K +S   +
Sbjct: 326 TCVHTFFDHQDQVWGVKYNGTGSKVVSVGDD 356


>gi|114632660|ref|XP_001135279.1| PREDICTED: transcription initiation factor TFIID subunit 5 isoform
           1 [Pan troglodytes]
          Length = 800

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 472 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 531

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 587

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 588 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 644

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 645 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 699

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILA 727



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 585 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 696

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 697 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 738


>gi|113954584|ref|YP_731657.1| lipoprotein [Synechococcus sp. CC9311]
 gi|113881935|gb|ABI46893.1| lipoprotein, putative [Synechococcus sp. CC9311]
          Length = 175

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 41/139 (29%), Gaps = 7/139 (5%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFT 364
             + S +   +    D+ G+  + +    G    R+        +  P  S  G  +A  
Sbjct: 35  DPALSGNGRLLAVIEDQNGRPTVQLRDVQGGGSLRLRHLSRHQPHSSPSLSWNGRYLAVI 94

Query: 365 KFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              G    + +  +   +   L      +    + +P  R L       G    ++  + 
Sbjct: 95  TQRGNHRLVLIEDRLTGKAHPLHLPSGRDPVQVSLAPDARKLAIQTADQGRWRVEVIDLS 154

Query: 423 L----NGRNETLINTPAYA 437
                +G       TP+ A
Sbjct: 155 GMLEPDGPGGQRRTTPSEA 173



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 49/140 (35%), Gaps = 7/140 (5%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +P  S N + +A     +                  R  +      +P  S NG+   + 
Sbjct: 35  DPALSGNGRLLAVIEDQNGRPTVQLRDVQGGGSLRLRHLSRHQPHSSPSLSWNGRYLAVI 94

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQ-- 332
            Q+     +   D  +     L      + +  S +PD+ ++  ++  +G+ ++ V+   
Sbjct: 95  TQRGNHRLVLIEDRLTGKAHPLHLPSGRDPVQVSLAPDARKLAIQTADQGRWRVEVIDLS 154

Query: 333 ----SNGSDQKRISQDKEAS 348
                +G   +R +   EA+
Sbjct: 155 GMLEPDGPGGQRRTTPSEAN 174


>gi|110665722|ref|NP_796316.2| transcription initiation factor TFIID subunit 5 [Mus musculus]
 gi|162318488|gb|AAI56181.1| TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated
           factor [synthetic construct]
          Length = 801

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 473 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 532

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 533 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 588

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 589 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 645

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 646 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 700

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 701 HGLMVGELKGHTDTVCSLRFSRDGEILA 728



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 586 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 641

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 642 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 697

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 698 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 739


>gi|109090468|ref|XP_001113759.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
           isoform 1 [Macaca mulatta]
          Length = 800

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 472 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 531

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 587

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 588 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 644

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 645 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 699

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILA 727



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 585 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 696

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 697 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 738


>gi|62898962|dbj|BAD97335.1| Transcription initiation factor TFIID subunit 5 variant [Homo
           sapiens]
          Length = 803

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 475 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 534

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 535 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 590

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 591 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 647

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 648 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 702

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 703 HGLMVGELKGHTDTVCSLRFSRDGEILA 730



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 588 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 643

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 644 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 699

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 700 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 741


>gi|1491718|emb|CAA64777.1| hTAFII100 [Homo sapiens]
          Length = 799

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 472 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 531

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 587

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 588 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 644

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 645 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 699

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILA 727



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 585 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 696

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 697 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 738


>gi|157822291|ref|NP_001099835.1| transcription initiation factor TFIID subunit 5 [Rattus norvegicus]
 gi|149040330|gb|EDL94368.1| TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated
           factor (predicted) [Rattus norvegicus]
          Length = 798

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 470 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 529

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 530 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 585

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 586 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 642

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 643 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 697

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 698 HGLMVGELKGHTDTVCSLRFSRDGEILA 725



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 583 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 638

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 639 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 694

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 695 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 736


>gi|1732075|gb|AAC50902.1| TBP-associated factor [Homo sapiens]
          Length = 801

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 473 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 532

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 533 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 588

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 589 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 645

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 646 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 700

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 701 HGLMVGELKGHTDTVCSLRFSRDGEILA 728



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 586 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 641

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 642 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 697

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 698 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 739


>gi|1932938|gb|AAC51215.1| TFIID subunit TAFII100 [Homo sapiens]
 gi|187952373|gb|AAI36349.1| TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated
           factor, 100kDa [Homo sapiens]
          Length = 800

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 472 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 531

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 587

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 588 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 644

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 645 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 699

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILA 727



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 585 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 696

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 697 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 738


>gi|21071067|ref|NP_008882.2| transcription initiation factor TFIID subunit 5 [Homo sapiens]
 gi|78103206|sp|Q15542|TAF5_HUMAN RecName: Full=Transcription initiation factor TFIID subunit 5;
           AltName: Full=Transcription initiation factor TFIID 100
           kDa subunit; Short=TAF(II)100; Short=TAFII-100;
           Short=TAFII100
 gi|55961125|emb|CAI16747.1| TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated
           factor, 100kDa [Homo sapiens]
 gi|119570030|gb|EAW49645.1| TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated
           factor, 100kDa, isoform CRA_a [Homo sapiens]
 gi|158255894|dbj|BAF83918.1| unnamed protein product [Homo sapiens]
 gi|208967911|dbj|BAG73794.1| TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated
           factor, 100kDa [synthetic construct]
          Length = 800

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 472 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 531

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 587

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 588 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 644

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 645 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 699

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILA 727



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 585 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 696

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 697 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 738


>gi|68485099|ref|XP_713539.1| hypothetical protein CaO19.11354 [Candida albicans SC5314]
 gi|46435043|gb|EAK94434.1| hypothetical protein CaO19.11354 [Candida albicans SC5314]
          Length = 384

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 69/244 (28%), Gaps = 37/244 (15%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    D+ +     SP+  K+   + D      V+       +    +          R+
Sbjct: 54  VLKDHDKTVTSVDISPDGSKILTCSQD--RNALVWEYANGEYKPTLVLLRINRAATVCRW 111

Query: 266 SSNGKRALISVQKD-------EAMDIYSVDLQSNATERLTNTLFINISASY------SPD 312
           S +G +  +            E  + + V        +LT T  I+   +       S D
Sbjct: 112 SPDGSKFAVGSSDRIIAVCYYEEENDWWVSKHLKKPLKLTITT-IDWHPNGVLLACGSTD 170

Query: 313 SSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVW------SPQGDLIAF 363
               VF    +G   K    V    G+     +   + +     W      SP G+ +A+
Sbjct: 171 GHVRVFSGYIKGIDAKPDPSVW---GTKLPFQTLCGDYTNETNAWIHGVKFSPDGNALAY 227

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKLYS 420
                    +     +G   R +        P      +S+++   +    G     L  
Sbjct: 228 VSHDSSVGFVYPQ-GEGLPPRAIFNVKTDNLPF-----KSVVWLNDQQVCAGGFTCNLVV 281

Query: 421 IDLN 424
              +
Sbjct: 282 FQGD 285


>gi|291239799|ref|XP_002739808.1| PREDICTED: CG3436-like [Saccoglossus kowalevskii]
          Length = 350

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/292 (14%), Positives = 83/292 (28%), Gaps = 35/292 (11%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRFS 220
           I      E   F+ +      ++ S      + + +  G    + L       + E  FS
Sbjct: 51  IMLLTGHEGEIFSCKFSPDGNTLASAGYDRLIHLWNVYGECENFALFKGHTGAVMELNFS 110

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            +   +  A+ D      + L D +     K++    S + +   +  G + ++S   D 
Sbjct: 111 TDGSTLFTASTDK----TIALWDMQTGGRIKKLRGHTSFVNSCHSTRRGVQLVVSGSDDG 166

Query: 281 AMDIYSVDLQSNATE-----RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            + ++    +          ++T   F + S                     L V     
Sbjct: 167 TIKLWDTRKKGAIETFQNTYQVTAVSFNDTSNQVISGGI----------DNDLKVWDLRK 216

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQ 393
           +D     +    +      SP G  I  T        I  ++    QER   L + +   
Sbjct: 217 NDIVYKMRGHSDTITGMELSPDGSYIV-TNAMDNTVRIWDVRPFAPQERCVKLFQGAQHN 275

Query: 394 A------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                   +WS  G  +       G     +Y  D   R   L   P +   
Sbjct: 276 FEKNLLRCSWSSDGSKIA-----SGSADRFVYVWDTTTR-RILYKLPGHNGS 321



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 66/211 (31%), Gaps = 49/211 (23%)

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
              G Q++V+G         ++    LWD + +  I   +      +++  A + +D   
Sbjct: 152 TRRGVQLVVSGS----DDGTIK----LWDTRKKGAIETFQ-----NTYQVTAVSFNDT-- 196

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                            S  V+SG I N L V D    +I Y        +     SP+ 
Sbjct: 197 -----------------SNQVISGGIDNDLKVWDLRKNDIVYKMRGHSDTITGMELSPDG 239

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIG--------NFRSMILAPRFSSNGKRALIS 275
             +     D+     V + D R     +R          NF   +L   +SS+G +    
Sbjct: 240 SYIVTNAMDN----TVRIWDVRPFAPQERCVKLFQGAQHNFEKNLLRCSWSSDGSKIA-- 293

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                + D +     +     L      N S
Sbjct: 294 ---SGSADRFVYVWDTTTRRILYKLPGHNGS 321


>gi|281201950|gb|EFA76157.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 761

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 73/232 (31%), Gaps = 36/232 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +                +    +SP+ Q +A       D  +V + +T+      
Sbjct: 345 QLLVWEWRSETYILKQQGHSYNMSTMAYSPDGQTIA----TGGDDGKVKIWNTQSGYCFV 400

Query: 252 RIGNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                 + + A R+S  G + A+ S   D  +  + +              + N     S
Sbjct: 401 TFSEHEAPVTAIRYSPVGSQNAVFSASLDGTVRAFDL------------LRYRNFRTFVS 448

Query: 311 PDSSQIVFES---DREG---------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           P+ SQ  F S   D  G           ++YV          +     +      + P  
Sbjct: 449 PNKSQ--FSSLAIDAAGEIVVAGCVDTFEIYVWSIRTGRLTDVLSGHTSPVSSVAFDPST 506

Query: 359 DLIAFTKFSGEKFAIGVMKK--DGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            ++A   +      I V     DG+ +  ++  S++ A  +SP G     S 
Sbjct: 507 SMLASGSWDKT---IRVWDLFEDGATKENIINKSDVLAIAYSPDGSRFAVST 555



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 34/244 (13%), Positives = 85/244 (34%), Gaps = 16/244 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y     +Q +    F+   + +A+A+ +   +L V+   +      ++  ++    +A  
Sbjct: 315 YRLNISNQAITSVAFNSTGEWMAFASKELGQLL-VWEWRSETYILKQQGHSYNMSTMA-- 371

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQ-IVFESDR 322
           +S +G+    +   D  + I+  + QS       +       +  YSP  SQ  VF +  
Sbjct: 372 YSPDGQTIA-TGGDDGKVKIW--NTQSGYCFVTFSEHEAPVTAIRYSPVGSQNAVFSASL 428

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G  + + +     + +      ++ +        G+++         F I V      +
Sbjct: 429 DGTVRAFDL-LRYRNFRTFVSPNKSQFSSLAIDAAGEIVVAGCVD--TFEIYVWSIRTGR 485

Query: 383 ER-LLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
              +L    S + +  + PS   L        D   +++ +  +G  +  I   +     
Sbjct: 486 LTDVLSGHTSPVSSVAFDPSTSMLA---SGSWDKTIRVWDLFEDGATKENIINKSDVLAI 542

Query: 441 QWVG 444
            +  
Sbjct: 543 AYSP 546



 Score = 37.7 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            + V       +  +       +    F P+   +A  ++D      + + D   D A K
Sbjct: 475 EIYVWSIRTGRLTDVLSGHTSPVSSVAFDPSTSMLASGSWDK----TIRVWDLFEDGATK 530

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                +S +LA  +S +G R  +S   D ++ I+
Sbjct: 531 ENIINKSDVLAIAYSPDGSRFAVST-LDGSIQIF 563


>gi|224062481|ref|XP_002300840.1| hypothetical protein POPTRDRAFT_551164 [Populus trichocarpa]
 gi|222842566|gb|EEE80113.1| hypothetical protein POPTRDRAFT_551164 [Populus trichocarpa]
          Length = 314

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 80/232 (34%), Gaps = 16/232 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                     ++ +   +FS +   +A A+ D      + L  +       R+      +
Sbjct: 15  YRHIRTLRGHERAVSCVKFSNDGTLLASASLDK----TLILWSSPDFSLVHRLIGHSEGV 70

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+      S   D  + I+      +  + L          +++P S+ IV  S
Sbjct: 71  SDLAWSSDSHYIC-SASDDRTLRIWDARTPFDCLKILKGHSDFVFCVNFNPQSNLIVSGS 129

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + + +       R+ +          ++  G LI      G    I      G
Sbjct: 130 F---DETIRIWEVKTGKCVRVIRAHSMPVTSVHFNRDGSLIVSGSHDGS-CKIWEAS-SG 184

Query: 381 SQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           +  + L++D N  +    +SP+G+ ++ +     D+  KL++    G+   +
Sbjct: 185 TCLKTLIDDKNPAVSFVKFSPNGKFILVATL---DSTLKLWNYS-TGKFLKI 232


>gi|195565929|ref|XP_002106547.1| GD16950 [Drosophila simulans]
 gi|194203926|gb|EDX17502.1| GD16950 [Drosophila simulans]
          Length = 443

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 5/106 (4%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  ++ D + +   S   G   + + Q +      + +          WSP  D + F 
Sbjct: 212 TSMQWNKDGTHLATASI--GDRSIIIWQPDTGMMHPLKRLGPPGSLLK-WSPDNDWL-FA 267

Query: 365 KFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK 409
                 F +    +  + ER +      +Q   WSP GR L+F   
Sbjct: 268 ATVDRVFRVWNCHQQWTTERWVCGPGGYIQTACWSPCGRFLLFVSS 313


>gi|168704444|ref|ZP_02736721.1| WD repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 1133

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 51/288 (17%), Positives = 104/288 (36%), Gaps = 35/288 (12%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           V     +I + + +   + R +        +++     G + +   F      S   K  
Sbjct: 329 VTAGDDLIVRTYDAVTGAARDVRALDGPLTHETALAADGRYLAGAAF------SASRKAE 382

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---ATYDDEDILRVYLMDTRIDRA 249
           + V +     +    P     +          KVA+      D   + +V + D      
Sbjct: 383 IRVWELATGKLVGTLPLSGDAVRGLAVHSGATKVAFICGPETDPPSLRKVCVWDFVKAGE 442

Query: 250 PKRIGNFRSMIL---APR--FSSNGKRALISVQKDEAMDIY-SVDLQSNATERLTNTLFI 303
           P  +G+ + + +    PR  FS +G   L++ Q+D  +     V+ ++   ++LTN  F 
Sbjct: 443 PTELGSSKPLNVRYGEPRNLFSPDGN-LLLTHQQDGQLVCRDLVNRKTLWQKKLTNIRFF 501

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-----EASYFDPVWSPQG 358
                ++PD   +V   +  G E  +   ++GS+    + D        ++     S  G
Sbjct: 502 ----FFAPDGKNVVIAPNGSGFE--FWSAADGSNVAGKAWDGTGVRDPYNHGPVAVSASG 555

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            L+A +          V+  D  +  ++ E   L AP  +P    L+F
Sbjct: 556 RLVALSHGLRR-----VVLYDTVKRAVVRE---LNAPRLTPDEAVLMF 595



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 28/225 (12%), Positives = 69/225 (30%), Gaps = 30/225 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-----PRFSSNGKRA 272
            F+P+ + +  +     D L+V+ + +       +    R+  ++        + +GKR 
Sbjct: 686 AFTPDGRTLITSNDVGRDPLKVWDLASGTGATIPKGSAPRTQYVSGRCLQATVTPDGKRL 745

Query: 273 L------ISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           +      I+ ++       +V DL      R             +P           +  
Sbjct: 746 VTLTYNGIAGERTPPGHYLTVWDLAERKVVREEQVSGSGREPIIAPGGEVCAIIPPIDEH 805

Query: 326 EQLY-VMQSNGSDQKRISQD---KEASYFDP---VWSPQGDLIAFT---------KFSGE 369
                +  + G +  R+++    K      P   V+S  G  +A                
Sbjct: 806 PGARLIATATGKEIGRLTERDLLKGGLSGQPLELVFSADGRTVATRVTDDSGTAESVGDS 865

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
              +  +    +  +     +     +++P GR+L+ +      T
Sbjct: 866 PVKLWDIATARAFAQFPTTGAARF--SFAPDGRTLVIAGSSGFRT 908



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 50/331 (15%), Positives = 112/331 (33%), Gaps = 50/331 (15%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ---SIT 167
           LVTG      + R  V +    +   +  +           R  A T+   +      + 
Sbjct: 209 LVTGATDASQQARAAVAY----LASGRAPVALSGLLGGGGGRWKAVTLFASLVACGMGLL 264

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-----GANIRYLTPSRDQILFEPRFSPN 222
           G  G  + +      S   G  K++  +         GA  R+ T            +P+
Sbjct: 265 GAAGRPDEKTAATETSGPKGAQKSAERIDRFGDPLPAGALARFGTGRHRAPGAHVAVTPD 324

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---ISVQKD 279
            + V  A  D   I+R Y   T   R  + +    +   A   +++G+       S  + 
Sbjct: 325 GKTVVTAGDDL--IVRTYDAVTGAARDVRALDGPLTHETA--LAADGRYLAGAAFSASRK 380

Query: 280 EAMDIY---------SVDLQSNATERLTNTLFINISASYSPDSSQIVF----ESDREGKE 326
             + ++         ++ L  +A   L               ++++ F    E+D     
Sbjct: 381 AEIRVWELATGKLVGTLPLSGDAVRGLAVHSG----------ATKVAFICGPETDPPSLR 430

Query: 327 QLYVMQ-SNGSDQKRI--SQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           ++ V       +   +  S+     Y +P   +SP G+L+   +  G+     ++ +   
Sbjct: 431 KVCVWDFVKAGEPTELGSSKPLNVRYGEPRNLFSPDGNLLLTHQQDGQLVCRDLVNRKTL 490

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            ++ L    N++   ++P G++++ +    G
Sbjct: 491 WQKKLT---NIRFFFFAPDGKNVVIAPNGSG 518



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 51/367 (13%), Positives = 103/367 (28%), Gaps = 79/367 (21%)

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           + E R+W++   K +                     D  + +    G   +++ F+    
Sbjct: 380 KAEIRVWELATGKLVGTLPLSG--------------DAVRGLAVHSGA--TKVAFICGPE 423

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFE---PR--FSPNQQKVAYATYDDEDILRV 239
                   +CV D   A       S   +      PR  FSP+   +     D + + R 
Sbjct: 424 TDPPSLRKVCVWDFVKAGEPTELGSSKPLNVRYGEPRNLFSPDGNLLLTHQQDGQLVCRD 483

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR-----FSSNGKRALISVQKDE-------------- 280
            +    + +  K++ N R    AP       + NG         D               
Sbjct: 484 LVNRKTLWQ--KKLTNIRFFFFAPDGKNVVIAPNGSGFEFWSAADGSNVAGKAWDGTGVR 541

Query: 281 ---AMDIYSVDLQSN------ATERL----TNTLFINIS---ASYSPD---------SSQ 315
                   +V              R+    T    +         +PD          + 
Sbjct: 542 DPYNHGPVAVSASGRLVALSHGLRRVVLYDTVKRAVVRELNAPRLTPDEAVLMFWKVPTT 601

Query: 316 IVFESDREG----KEQLYVMQSNGSDQK-RISQDKEASYFDPV--WSPQGDLIAFTKFSG 368
             F  D  G       +             ++ D+  +       ++P G   A    + 
Sbjct: 602 FAFTPDETGFVWRAPTVQRWDVATGKAMWPVTWDQGHTEAVTRLLFAPGGA--ALVSAAA 659

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           + +        G  ++ +++D       ++P GR+LI +    G    K++ +  +G   
Sbjct: 660 DDYHYVWDLASGRAQQRMLKDFGDLM-AFTPDGRTLI-TSNDVGRDPLKVWDL-ASGTGA 716

Query: 429 TLINTPA 435
           T+    A
Sbjct: 717 TIPKGSA 723


>gi|115449653|ref|NP_001048519.1| Os02g0817200 [Oryza sativa Japonica Group]
 gi|47847742|dbj|BAD21520.1| putative Arp2/3 complex 41kD subunit [Oryza sativa Japonica Group]
 gi|47848194|dbj|BAD22021.1| putative Arp2/3 complex 41kD subunit [Oryza sativa Japonica Group]
 gi|113538050|dbj|BAF10433.1| Os02g0817200 [Oryza sativa Japonica Group]
 gi|215707249|dbj|BAG93709.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222623913|gb|EEE58045.1| hypothetical protein OsJ_08878 [Oryza sativa Japonica Group]
          Length = 375

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 76/240 (31%), Gaps = 59/240 (24%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+   +A+   ++E  + +Y   T        +     ++    +S +  + + +V 
Sbjct: 17  AWSPDHSMIAFCPNNNE--VHIYKFFTDKWEKLHVLSKHDQIVSGIDWSRSSNKIV-TVS 73

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISAS--------------YSPDSSQIVFESDRE 323
            D    +++                 +   +              +SP  ++    S   
Sbjct: 74  HDRNSYVWT-------------QEGHDWVPTLVILKLNRAALCVQWSPKENKFAVGS--- 117

Query: 324 GKEQLYVMQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV---- 375
           G + + +      +     K + +  E+S     W P   L+A T   G+   +      
Sbjct: 118 GAKSVCICYYEQDNNWWISKVVRKKHESSVTSVAWHPNNILLATTSTDGKCRVLSTFIKG 177

Query: 376 MKKDGSQERLLVEDSNLQ-------------APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   GS      +    +                WSPSG++L ++        S +Y ID
Sbjct: 178 VDTRGSHASTSTDWKFGEQIAQLDLSSMWAFGVRWSPSGKTLAYA-----GHNSMIYFID 232


>gi|300868149|ref|ZP_07112782.1| WD repeat-containing protein (fragment) [Oscillatoria sp. PCC 6506]
 gi|300333852|emb|CBN57962.1| WD repeat-containing protein (fragment) [Oscillatoria sp. PCC 6506]
          Length = 759

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 70/197 (35%), Gaps = 7/197 (3%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + ++  F + S         +  ++     +R      D ++   R +   Q +      
Sbjct: 475 YQTKEAFNAGSQKRQAEIAEIKALNSTSQALRVSGNQLDALVNSLRAAKKLQLLGAFNLL 534

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            ++++R         +   R+   +  +    FS +GK    +V  D+ + ++S   +  
Sbjct: 535 QKEVIRNLQGPLSEVQEYNRLEGHKGWVWDVSFSPDGKTIA-TVGDDKIVKLWS--DRGE 591

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             + L        + S+SPD  +I   S ++   +++ ++               S F  
Sbjct: 592 LIKNLEGHSDRIYAVSFSPDGQKIA-TSSKDKTVKIWSIE---GKLLETFSGHSESVFSV 647

Query: 353 VWSPQGDLIAFTKFSGE 369
            ++PQG ++A       
Sbjct: 648 SFNPQGTILASASKDNT 664



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGR 402
             +   +D  +SP G  IA     G+   + +    G   + L   S+ + A ++SP G+
Sbjct: 557 GHKGWVWDVSFSPDGKTIATV---GDDKIVKLWSDRGELIKNLEGHSDRIYAVSFSPDGQ 613

Query: 403 SLIFSRKKDGDTGSKLYSI 421
            +  S K   D   K++SI
Sbjct: 614 KIATSSK---DKTVKIWSI 629


>gi|289663605|ref|ZP_06485186.1| putative secreted protein [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 823

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 83/252 (32%), Gaps = 25/252 (9%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRF 219
           DI +    E      RI   + +       + L ++   DG+  +         L +  +
Sbjct: 69  DIAEVAQPELKLAGMRIHPKTFAASRFSFASKLWLLSVADGSERQIAGLPSPLSLADLNW 128

Query: 220 SPNQQKVAYATYD-DEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALI-SV 276
           SP+Q+ +A+   D       ++L+D    +A + +     S+    R+  +G   L+  V
Sbjct: 129 SPDQRYLAFRREDAASGANELWLVDVAAGQARRLVAGLNTSVDDDLRWLPDGSGLLLQQV 188

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP----DSSQIVFESDREGKEQLYVMQ 332
               A           A ++ +    +    +Y      ++    FE    G+  +  + 
Sbjct: 189 AGQGAPPTRDATPAGPAIQQTSAAAGVRSLPTYQDLLRNEADARAFEYYATGQPIIVTLS 248

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----------AIGVMKKDGS 381
                 + +       Y +   SP G  I  ++ S   F            I V+   G 
Sbjct: 249 G-----QVLPIAAPGIYLNLSVSPDGRYIL-SERSERPFSYLVPVTNFPRRIEVLDLQGK 302

Query: 382 QERLLVEDSNLQ 393
             R + +   ++
Sbjct: 303 LVRQIAQLPLVE 314


>gi|290957615|ref|YP_003488797.1| dipeptidyl-peptidase IV [Streptomyces scabiei 87.22]
 gi|260647141|emb|CBG70240.1| putative dipeptidyl-peptidase IV [Streptomyces scabiei 87.22]
          Length = 731

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 74/215 (34%), Gaps = 38/215 (17%)

Query: 212 QILFEPRFSPNQQKVAYAT------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR- 264
             + +PR SP+ + VAYA          E    V L +   +     +  F +     R 
Sbjct: 158 GPVIDPRPSPDGRYVAYAAGGTLRVVGVEGGDDVALTEEESENVTHGLAEFIAAEEMGRS 217

Query: 265 ----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-- 318
               +S    R L++   D  +  + +       ER               D  ++ +  
Sbjct: 218 RGFWWSPESDRLLVARVDDTPVRRWWIS-DPAQPER---------------DPQRVAYPA 261

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGV-M 376
                   +L+V+  +G+  + +       Y   V WS  G  +   +   ++  + + +
Sbjct: 262 AGTANADVRLFVIDLSGTRTEVVWDRARYPYLAHVHWSAAGAPLILVQARDQRSQLFLAV 321

Query: 377 KKDGSQERLLVEDSNLQA-------PTWSPSGRSL 404
             D    R++  D +          P+WSPSG+ +
Sbjct: 322 DPDTGATRMVHADEDPHWLDLFPGVPSWSPSGQLV 356


>gi|254574082|ref|XP_002494150.1| Component of the nuclear pore complex [Pichia pastoris GS115]
 gi|238033949|emb|CAY71971.1| Component of the nuclear pore complex [Pichia pastoris GS115]
 gi|328354031|emb|CCA40428.1| Vegetative incompatibility protein HET-E-1 [Pichia pastoris CBS
           7435]
          Length = 355

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 5/100 (5%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           +D  N   +    +  + +  FSP  + +A A++D +  +RVY +        + + +  
Sbjct: 17  QDLQNDVVVGNGPEDSISDLAFSPQAELLAVASWDKK--VRVYEVLPTGTTEGRALYDHE 74

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           S +LA  +S +G +   +   D  + +Y  D+Q+   + L
Sbjct: 75  SPVLAVHWSPDGTKVA-TGAADRQVRLY--DVQTGQVQNL 111



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SP +  +   S  + K ++Y +   G+ + R   D E+      WSP G  +A     
Sbjct: 37  AFSPQAELLAVAS-WDKKVRVYEVLPTGTTEGRALYDHESPVLAVHWSPDGTKVA---TG 92

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                + +      Q + L      +AP 
Sbjct: 93  AADRQVRLYDVQTGQVQNL---GMHEAPV 118



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 10/85 (11%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---- 396
           +    E S  D  +SPQ +L+A   +  +     V+    ++ R L    + ++P     
Sbjct: 25  VGNGPEDSISDLAFSPQAELLAVASWDKKVRVYEVLPTGTTEGRAL---YDHESPVLAVH 81

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
           WSP G  +        D   +LY +
Sbjct: 82  WSPDGTKVA---TGAADRQVRLYDV 103


>gi|306755736|sp|A0S5W0|DPP5_ARTOT RecName: Full=Dipeptidyl-peptidase 5; AltName:
           Full=Dipeptidyl-peptidase V; Short=DPP V; Short=DppV;
           Flags: Precursor
 gi|82754243|gb|ABB89929.1| dipeptidyl peptidase V [Arthroderma otae]
          Length = 726

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 73/203 (35%), Gaps = 29/203 (14%)

Query: 265 FSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTL----------FINISA 307
            S +GK      +  E          I++V    +      N              + S 
Sbjct: 232 LSPDGKTVAFMSKAPELPKANLTTSYIFTVPHDGSKVAEPINKRNGPRTPHGIEGASSSP 291

Query: 308 SYSPDSSQIVF----ESDREGKEQLYVMQSNGSD--QKRISQDKEASYFDPVWSPQGDLI 361
            +SPDS +I +      + E   ++  +   GS+   +RI+ + + S     WS  G  +
Sbjct: 292 VFSPDSKRIAYLQMATKNYESDRRVIHIAEVGSNKPAQRIASNWDRSPESIKWSSDGRTL 351

Query: 362 AFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             T     +G+ F +    +D      +  D ++ A ++  S +S++ +        + L
Sbjct: 352 YVTAEEHATGKLFTLPSDARDNHMPSAVKHDGSVSAFSFVGSSKSVLITGNS--LWSNAL 409

Query: 419 YSIDLNGRNETLINTPAYASDPQ 441
           Y I   GR    +   A   DPQ
Sbjct: 410 YQIATPGRPNRKLFY-ANEHDPQ 431



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 76/253 (30%), Gaps = 40/253 (15%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S  IY S+     D      F   +V SG +  +      DG     + P +      P 
Sbjct: 166 SARIYDSLFVRHWDAYVGTQF--NAVFSGALTKNGNKYSFDGKLKNLVQPVKYAESPYPP 223

Query: 219 F--------SPNQQKVAYAT---------------YDDEDILRVYLMDTRIDRAPKRIGN 255
           F        SP+ + VA+ +               +                  P+    
Sbjct: 224 FGGSGDYDLSPDGKTVAFMSKAPELPKANLTTSYIFTVPHDGSKVAEPINKRNGPRTPHG 283

Query: 256 FRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQ----SNATERLTNTLFINISAS- 308
                 +P FS + KR        K+   D   + +     +   +R+ +    + S   
Sbjct: 284 IEGASSSPVFSPDSKRIAYLQMATKNYESDRRVIHIAEVGSNKPAQRIASN--WDRSPES 341

Query: 309 --YSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAF 363
             +S D   +   ++     +L+ + S+  D      +  D   S F  V S +  LI  
Sbjct: 342 IKWSSDGRTLYVTAEEHATGKLFTLPSDARDNHMPSAVKHDGSVSAFSFVGSSKSVLITG 401

Query: 364 TK-FSGEKFAIGV 375
              +S   + I  
Sbjct: 402 NSLWSNALYQIAT 414



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 35/270 (12%), Positives = 85/270 (31%), Gaps = 38/270 (14%)

Query: 211 DQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           D  + E  +      + Y   T   +  + +++ D +      + G+        + + +
Sbjct: 77  DADVSEITWLGEGTNLLYVNGTDSVKGGVGIWISDAKNFGNAYKAGSIPGAFQGFKLAKS 136

Query: 269 GKRALI-----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           G +        S  K +  +  +++   ++  R+ ++LF+    +Y       VF     
Sbjct: 137 GDKINFVGYGQSTTKGDLYNEAAIEKPVSSA-RIYDSLFVRHWDAYVGTQFNAVFSGALT 195

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASY------FDPVWSPQGDLIAFTKFSGE-------K 370
                Y       +  +  +  E+ Y       D   SP G  +AF   + E        
Sbjct: 196 KNGNKYSFDGKLKNLVQPVKYAESPYPPFGGSGDYDLSPDGKTVAFMSKAPELPKANLTT 255

Query: 371 FAIGVMKKDGSQERLLVE-----------DSNLQAPTWSPSGRSLIFSRKKDGDTGSK-- 417
             I  +  DGS+    +            +    +P +SP  + + + +    +  S   
Sbjct: 256 SYIFTVPHDGSKVAEPINKRNGPRTPHGIEGASSSPVFSPDSKRIAYLQMATKNYESDRR 315

Query: 418 -LYSIDLNGRNETLINTPAYASDP---QWV 443
            ++  ++            +   P   +W 
Sbjct: 316 VIHIAEVGSNKPAQRIASNWDRSPESIKWS 345


>gi|20091548|ref|NP_617623.1| hypothetical protein MA2724 [Methanosarcina acetivorans C2A]
 gi|19916704|gb|AAM06103.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 380

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 92/262 (35%), Gaps = 33/262 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN--QQKVAYATY------DDEDIL 237
           +      +   D +   +  ++   + ++   R +P+     + Y            D +
Sbjct: 62  NAYGDKVVWTGDSETVYMYDISTGNETLIASERRAPDIFGNYIVYTNNYYYGQDHQNDGI 121

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATER 296
            +Y ++T  +     + +F ++         G + + S +      DIY  D+ +  T +
Sbjct: 122 YLYDLNTHNETKIAAVYSFPAIY--------GNKVVWSPENSSNASDIYLYDISNQQTGK 173

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T T      +      + +V+     G   +Y+     +   +++     +      S 
Sbjct: 174 ITTTNSSIPESELDIFGNVVVWA--ESGN--VYMHDMASNKTTQVTS----NVSAYQPSI 225

Query: 357 QGDLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            G+ I +     +SG    I + +   ++   +   ++   P+    G  ++++  ++  
Sbjct: 226 YGNWIVYMIGDPYSGGNKDIYMYEIPAARTTRITNSTHAFNPSV--YGDKIVYADCRNNP 283

Query: 414 ---TGSKLYSIDLNGRNETLIN 432
                  +Y  DL+  +  L+ 
Sbjct: 284 EFCEARDIYLYDLSNTSNNLVA 305


>gi|39979226|emb|CAE85596.1| related to histone transcription regulator [Neurospora crassa]
          Length = 1028

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 81/242 (33%), Gaps = 41/242 (16%)

Query: 220 SPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRA 272
           SP+ +++A A          +  ++    R    P+++    +    I + RFS NG+  
Sbjct: 26  SPDGKRLATAGGDGHVRVWSVEAIFNSHDRNYTKPRQLCHMSHHLGTIHSVRFSPNGRYL 85

Query: 273 LISVQKDEAMDIYSVDLQSNAT-------------ERLTNTLFINISASYSPDSS----- 314
                  +   I    L SN               +RL          ++SPD+S     
Sbjct: 86  A---SGADDKIICIYHLDSNPPSHTSTFVENWKTYKRLVGHDNDVQDLAWSPDNSLLVSV 142

Query: 315 ----QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSGE 369
               +IV  S     E+L  +  + S  K I+ D    +F      +   I  +T  +  
Sbjct: 143 GLDSKIVVWSGHT-FEKLKTLAVHQSHVKGITFDPANKFFATASDDRTIKIFRYTAPAPN 201

Query: 370 KFAIGVMK---KDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                ++     + S           +  +  +WSP G  +  +   +G   S +  I+ 
Sbjct: 202 ATQHDMVNNFILETSISVPFKHSPLTTYFRRCSWSPDGNHIAAANAVNGP-VSSIAIIER 260

Query: 424 NG 425
            G
Sbjct: 261 TG 262



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 45/314 (14%), Positives = 101/314 (32%), Gaps = 66/314 (21%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP--- 208
           R++ H      +   T     F+    +++    SG     +C+   D     + +    
Sbjct: 61  RQLCHM----SHHLGTIHSVRFSPNGRYLA----SGADDKIICIYHLDSNPPSHTSTFVE 112

Query: 209 ---------SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
                      D  + +  +SP+   +     D +    + +         K +   +S 
Sbjct: 113 NWKTYKRLVGHDNDVQDLAWSPDNSLLVSVGLDSK----IVVWSGHTFEKLKTLAVHQSH 168

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFINIS----------- 306
           +    F    K    +   D  + I+     +    +  + N   +  S           
Sbjct: 169 VKGITFDPANKFFA-TASDDRTIKIFRYTAPAPNATQHDMVNNFILETSISVPFKHSPLT 227

Query: 307 -----ASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP---- 356
                 S+SPD + I   +   G    + +++  G D +      EA     ++SP    
Sbjct: 228 TYFRRCSWSPDGNHIAAANAVNGPVSSIAIIERTGWDSEINLIGHEAPTEVCMFSPRLFY 287

Query: 357 ----------QG----DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSP 399
                      G     L+     +G+   + +   + S+  L+V+D   ++ +   W+P
Sbjct: 288 TQKPDENSNANGAASPGLVTVIASAGQDKTLTIWNTNTSRPVLIVQDIASKSVSDLAWTP 347

Query: 400 SGRSLIFSRKKDGD 413
            G+++ F+   DG 
Sbjct: 348 DGQTV-FAASLDGG 360



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 60/188 (31%), Gaps = 30/188 (15%)

Query: 265 FSSNGKRALISVQKDEAMDIYSV-------DLQSNATERL---TNTLFINISASYSPDSS 314
            S +GKR   +   D  + ++SV       D       +L   ++ L    S  +SP+  
Sbjct: 25  VSPDGKRLA-TAGGDGHVRVWSVEAIFNSHDRNYTKPRQLCHMSHHLGTIHSVRFSPNGR 83

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQ------------DKEASYFDPVWSPQGDLIA 362
            +   +D    + + +   + +     S               +    D  WSP   L+ 
Sbjct: 84  YLASGAD---DKIICIYHLDSNPPSHTSTFVENWKTYKRLVGHDNDVQDLAWSPDNSLLV 140

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  K  +         + L V  S+++  T+ P+ +   F      D   K++   
Sbjct: 141 SVGLD-SKIVVWSGHTFEKLKTLAVHQSHVKGITFDPANK---FFATASDDRTIKIFRYT 196

Query: 423 LNGRNETL 430
               N T 
Sbjct: 197 APAPNATQ 204



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 34/117 (29%), Gaps = 25/117 (21%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGV------MKKDGSQERLL----VEDSNLQAPTWSP 399
           +    SP G  +A     G      V        ++ ++ R L         + +  +SP
Sbjct: 21  YSCHVSPDGKRLATAGGDGHVRVWSVEAIFNSHDRNYTKPRQLCHMSHHLGTIHSVRFSP 80

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLN------------GRNETLINTPAYASDPQWVG 444
           +GR L        D    +Y +D N               + L+       D  W  
Sbjct: 81  NGRYLA---SGADDKIICIYHLDSNPPSHTSTFVENWKTYKRLVGHDNDVQDLAWSP 134


>gi|281341929|gb|EFB17513.1| hypothetical protein PANDA_012833 [Ailuropoda melanoleuca]
          Length = 483

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 60/176 (34%), Gaps = 22/176 (12%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 104 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCQGHRHW 159

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVW-----SPQ 357
            +S S+SPD  ++     + G  Q+ +   + G    R             W     +P+
Sbjct: 160 VLSISWSPDGKKLA-SGCKSG--QILLWDPSTGKQVGRALAGHSKWITGLSWEPLHANPE 216

Query: 358 GDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
              +A +   G    + V     G  ER+L     ++    W   G  L++S  +D
Sbjct: 217 CRYVASSSKDGS---VRVWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 267



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 341 GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASF---DKSV 397

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 398 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLATDLPGH 456

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 457 ADEVYAVDWSPDGQRVA 473



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/177 (10%), Positives = 50/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      +    +    + 
Sbjct: 132 SGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLA---SGCKSGQILLWDPST 188

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ ++           LT  
Sbjct: 189 GKQVGRALAGHSKWITGLSWEPLHANPECRYVA-SSSKDGSVRVWDT-TAGRCERILTGH 246

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 247 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 299



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 60/202 (29%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +         LV G+   +           LW  
Sbjct: 303 RTGAFEPAEASVNAQDLQGSLQELKDRALKRYN---LVRGQGPERLVSGSDDFTLFLWSP 359

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+  +    S  +    
Sbjct: 360 AEDKKPLA----------RMTGHQA--LINQVLFSP----DSRIVASASFDKSVKL---- 399

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
                DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 400 ----WDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAT 451

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 452 DLPGHADEVYAVDWSPDGQRVA 473


>gi|224082598|ref|XP_002306758.1| predicted protein [Populus trichocarpa]
 gi|222856207|gb|EEE93754.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/236 (13%), Positives = 90/236 (38%), Gaps = 18/236 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAP 263
            +  +    ++  +FS N + +A ++ D   I  ++ +D     + K R+   +  + + 
Sbjct: 266 QILEAHSDEVWFLQFSHNGKYLASSSSDQSAI--IWEIDVNGGVSLKHRLSGHQKPVSSV 323

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDR 322
            +S +  + L    ++    +   D+ S    ++   + +  +S  + PD   I F    
Sbjct: 324 SWSPDDHQLLTCGVEE---VVRRWDVSSGECLQVYEKVGLGLVSCGWFPDGKWI-FSGIN 379

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +  + + + + +G + +     +     D   +  G  I          A+ ++ ++   
Sbjct: 380 D--KSICMWELDGKEVECWKGQRTLKISDLEITSDGKQIISMCRGT---ALLLLDREAKV 434

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           ER++ ED  + + + S   R L+           +++  +++G    +     +  
Sbjct: 435 ERVIEEDQAITSFSLSRDNRFLLV-----NLLNQEIHLWNIDGDIRLVATYKGHKR 485


>gi|193690647|ref|XP_001947756.1| PREDICTED: protein HIRA homolog isoform 1 [Acyrthosiphon pisum]
 gi|328721774|ref|XP_003247402.1| PREDICTED: protein HIRA homolog isoform 2 [Acyrthosiphon pisum]
          Length = 897

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 58/183 (31%), Gaps = 22/183 (12%)

Query: 218 RFSPNQQKVA----------YATYDDEDILRV-----YLMDTRIDRAPKRIGNFRSMILA 262
           R+S + + +A          +      +   +      +++    +    + +    IL 
Sbjct: 77  RWSHSGKFLASGGDDKIIMVWTLSKYPNSGNIVFGTKNIVNIETWKCMFTLRSHSGDILD 136

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             +S +      S   D  + I+      +  + L+    +    S+ P    I  +SD 
Sbjct: 137 LAWSPHDSYLA-SCSVDNTIIIWDAQKFPSIHKVLSGHTGLVKGVSWDPIGKYISSQSD- 194

Query: 323 EGKEQLYVMQSNGSDQKRISQ----DKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-VMK 377
           +   +++      +D    +         S     WSP G  +           +  V++
Sbjct: 195 DRTLRIWRTSDWKTDTIVTTPFKDCGGNTSVLRHSWSPDGQYLVSAHAMNNNGPVAKVIE 254

Query: 378 KDG 380
           +DG
Sbjct: 255 RDG 257



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 74/257 (28%), Gaps = 42/257 (16%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI---------DRAPKRIGN 255
                    +F     P+  ++A       D   V L +T           +  PK +  
Sbjct: 7   SWISHNGMPIFSIDIHPDGTRLA-TGGQGRDSGLVMLWNTAAVLDENSENDENVPKMLCQ 65

Query: 256 FRSMILAP---RFSSNGKRAL----------ISVQKDEAMDIYS------VDLQS-NATE 295
             S + +    R+S +GK              ++ K              V++++     
Sbjct: 66  VDSHLASVNCVRWSHSGKFLASGGDDKIIMVWTLSKYPNSGNIVFGTKNIVNIETWKCMF 125

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVW 354
            L +     +  ++SP  S +   S       + +  +       ++            W
Sbjct: 126 TLRSHSGDILDLAWSPHDSYLASCSV---DNTIIIWDAQKFPSIHKVLSGHTGLVKGVSW 182

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------TWSPSGRSLIFSR 408
            P G  I+ ++       I       +   +     +          +WSP G+ L+ S 
Sbjct: 183 DPIGKYIS-SQSDDRTLRIWRTSDWKTDTIVTTPFKDCGGNTSVLRHSWSPDGQYLV-SA 240

Query: 409 KKDGDTGSKLYSIDLNG 425
               + G     I+ +G
Sbjct: 241 HAMNNNGPVAKVIERDG 257


>gi|75214628|gb|ABA18100.1| transducin/WD-40 repeat family protein [Olimarabidopsis pumila]
          Length = 946

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 68/232 (29%), Gaps = 22/232 (9%)

Query: 199 DGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           DG +    +       +     S +   +A  + D      V L           I  F 
Sbjct: 46  DGLSPSPTILRHHHDGVTALAISHDSTFLASGSIDH----FVKLYKFPSGEFQMNITRFT 101

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             I    F+ +G     +   +    I + D   +    L           + P+   + 
Sbjct: 102 LPIRVVAFNGSGSLLAAAGDDEGIKLINTFD--GSIVRVLKGHKGPVTGLDFHPNGELLA 159

Query: 318 FESDREGKEQLY-----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              D  G    +     ++          +    +      WSP G  +A     G +  
Sbjct: 160 -SIDSTGTVLCWELQNGIVSFTLKGVAPDTGFSTSIVNVLRWSPDGRTLAV---PGLRND 215

Query: 373 IGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSI 421
           + +  +   ++   +   +L+A    TW+P+G+ +        D    L+ +
Sbjct: 216 VVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIA---TSGLDKQVLLWDV 264



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 55/175 (31%), Gaps = 21/175 (12%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +   +  +P  + +    + A   S +      S   D  + +Y           +T   
Sbjct: 44  VHDGLSPSPTILRHHHDGVTALAISHDSTFLA-SGSIDHFVKLYKFP-SGEFQMNITRFT 101

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 +++   S +    D EG   + ++ +      R+ +  +       + P G+L+
Sbjct: 102 LPIRVVAFNGSGSLLAAAGDDEG---IKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELL 158

Query: 362 AFTKFSGE-----------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           A    +G             F +  +  D          S +    WSP GR+L 
Sbjct: 159 ASIDSTGTVLCWELQNGIVSFTLKGVAPDTG-----FSTSIVNVLRWSPDGRTLA 208


>gi|328867677|gb|EGG16059.1| WD40 repeat-containing protein [Dictyostelium fasciculatum]
          Length = 696

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/334 (12%), Positives = 108/334 (32%), Gaps = 36/334 (10%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            ++WD      +    F  +    +     +++D   S+              + + V  
Sbjct: 359 CKIWDTTSGACLTTFTFGDTTNDQQLGCLWVNNDTLISVNLAGEINYLNQAEGTTTRVIR 418

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                +  +  D A     + S D +LF+  +     + A          ++  +  R D
Sbjct: 419 GHNKLIGAIAYDPATKTLFSSSNDGVLFQ--WDLTTGQ-ATPFQGQGHTNQIAQIKIRGD 475

Query: 248 RAPK-------RIGNFRSMILAPRFSSN--GKRALISVQKDEAMDI-YSVDLQSNATERL 297
                      R+    +    P  + +  G+    +     A  +     +++      
Sbjct: 476 DIATCAMDDTVRVSKISTRQYGPSIAIDSPGQGIAFAGDVVVAASMKSVYVIKNGKAV-- 533

Query: 298 TNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                +     S S + S++     ++ K  +Y +  +   +    +       + V+SP
Sbjct: 534 --GTAVPYEPTSISTNGSEVA-VGGKDNKVYVYTISGDSLAKSHTLEQHRGIVTEVVYSP 590

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            G L+A T  +  +  +     DG   +    +   + + + +WS  G+ ++      G 
Sbjct: 591 CGKLLA-TADANREIIVW----DGKTAKNSSWVNHTARVNSLSWSADGKFIV-----SGG 640

Query: 414 TGSKLYSIDLNGRNETLI----NTPAYASDPQWV 443
             S +Y   ++ +N   I    + P   ++  W+
Sbjct: 641 LDSYIYIWSVDVKNGAPISFRNSHPGGVNEVTWI 674



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 43/146 (29%), Gaps = 10/146 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S N  +VA    D++  + VY +          +   R ++    +S  GK       
Sbjct: 543 SISTNGSEVAVGGKDNK--VYVYTISGDSLAKSHTLEQHRGIVTEVVYSPCGKLLA---T 597

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D   +I   D ++       N      S S+S D     F         +Y+   +  +
Sbjct: 598 ADANREIIVWDGKTAKNSSWVNHTARVNSLSWSADGK---FIVSGGLDSYIYIWSVDVKN 654

Query: 338 QKRISQDK--EASYFDPVWSPQGDLI 361
              IS          +  W      I
Sbjct: 655 GAPISFRNSHPGGVNEVTWINDKQFI 680



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 8/88 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           RFSP+  K    + D      V       ++  +  G     I+   ++ +  R + +  
Sbjct: 299 RFSPDGNKCVTVSSDKRG---VVFDGKTGEKLVELQGGHNGSIMCVSWAPDNNRIV-TAS 354

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI 305
            D+   I+  D  S A   LT   F + 
Sbjct: 355 ADKTCKIW--DTTSGAC--LTTFTFGDT 378



 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 29/225 (12%), Positives = 69/225 (30%), Gaps = 24/225 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +           +++P+   +A  + D +  LR++   ++       +      IL   +
Sbjct: 155 IYYEHPAATTVAKYAPSGNYIA--SGDVQGNLRIWDTISKEHPLKITLKVLNGAILDIAW 212

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREG 324
           +S+ +R +      E      +     +   +T ++  I      S    +        G
Sbjct: 213 TSDSQRIIAVGDGKERYGAAILWDSGASVGEITGHSKLIQTVDVKSSRPFRAA-----TG 267

Query: 325 KEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            E        G     ++ ++ D         +SP G+                   DG 
Sbjct: 268 SEDFTANWFEGPPFKFKQALATDHTRFVNCVRFSPDGNKCVTVSSDKRGVVF-----DGK 322

Query: 382 QERLLVE-----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               LVE     + ++   +W+P    ++ +     D   K++  
Sbjct: 323 TGEKLVELQGGHNGSIMCVSWAPDNNRIVTAS---ADKTCKIWDT 364


>gi|320587614|gb|EFX00089.1| transcriptional repressor tup1 [Grosmannia clavigera kw1407]
          Length = 596

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/196 (16%), Positives = 67/196 (34%), Gaps = 19/196 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM----ILAPRFSSNGKRAL 273
           RFS + +   Y         ++Y + T       +  +        I +  FS +GK   
Sbjct: 299 RFSADGK---YVATGCNRSAQIYDVQTGEKLCVLQDDSVDISGDLYIRSVCFSPDGKYLA 355

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +  +D+ + ++  D+QS            +  S  ++ D   I   S   G   + +  
Sbjct: 356 -TGAEDKLIRVW--DIQSRTIRNTFAGHEQDIYSLDFARDGRTIASGS---GDRTVRLWD 409

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN- 391
                   ++   E        SP    +A      +   +  ++     ERL   D + 
Sbjct: 410 IETGQSV-LTLTIEDGVTTVAISPDTKYVAAGSLD-KSVRVWDIQHGYLVERLEGPDGHK 467

Query: 392 --LQAPTWSPSGRSLI 405
             + +  +SP+G+ L+
Sbjct: 468 DSVYSVAFSPNGKDLV 483



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 46/274 (16%), Positives = 94/274 (34%), Gaps = 43/274 (15%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           LCV+  D      +  S D  +    FSP+ + +A    D   ++RV+ + +R  R    
Sbjct: 326 LCVLQDD-----SVDISGDLYIRSVCFSPDGKYLATGAED--KLIRVWDIQSRTIRNT-- 376

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSP 311
                  I +  F+ +G+    S   D  + ++  D+++  +   LT    +  + + SP
Sbjct: 377 FAGHEQDIYSLDFARDGRTIA-SGSGDRTVRLW--DIETGQSVLTLTIEDGV-TTVAISP 432

Query: 312 DSSQIVFESDREGKEQLYVMQSN-GSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFSG 368
           D+  +   S     + + V     G   +R+      + S +   +SP G  +       
Sbjct: 433 DTKYVAAGSL---DKSVRVWDIQHGYLVERLEGPDGHKDSVYSVAFSPNGKDLVSGSLDK 489

Query: 369 --EKFAIGV------MKKDGSQERLLVEDSNLQAPTWS--PSGRSLIFSRKKDG------ 412
             + + +            G +     E       + +  P    ++   K  G      
Sbjct: 490 TIKMWELAAPRGIPNQGPKGGRCVKTFEGHRDFVLSVALTPDAAWVMSGSKDRGVQFWDP 549

Query: 413 -DTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
               ++L    L G   ++I+    A  P    F
Sbjct: 550 RTGNTQLM---LQGHKNSVISV---APSPAGSYF 577



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 78/232 (33%), Gaps = 43/232 (18%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR I  G     V  RLWD++  + ++                        ++T E G  
Sbjct: 393 GRTIASGSGDRTV--RLWDIETGQSVL------------------------TLTIEDGVT 426

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ---ILFEPRFSPNQQKVAYAT 230
              I   ++ V +G +  S+ V D     +       D     ++   FSPN + +   +
Sbjct: 427 TVAISPDTKYVAAGSLDKSVRVWDIQHGYLVERLEGPDGHKDSVYSVAFSPNGKDLVSGS 486

Query: 231 -------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
                  ++      +     +  R  K     R  +L+   + +    ++S  KD  + 
Sbjct: 487 LDKTIKMWELAAPRGIPNQGPKGGRCVKTFEGHRDFVLSVALTPDAAW-VMSGSKDRGVQ 545

Query: 284 IYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +  D ++  T+ +      ++ S + SP  S     S   G  +  +   +
Sbjct: 546 FW--DPRTGNTQLMLQGHKNSVISVAPSPAGSYFATGS---GDMRARIWSYS 592


>gi|307181200|gb|EFN68897.1| Notchless protein-like protein 1 [Camponotus floridanus]
          Length = 499

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 55/129 (42%), Gaps = 12/129 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                Q++ + +F+PN + +A A++D      + L ++        +      I +  +S
Sbjct: 382 MTGHQQLINDVKFAPNGRIIASASFDK----SIKLWESSTGAYIASLRGHVQAIYSLAWS 437

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
           ++  R L+S   D  + I+S+  ++    + L        +  +SPD  ++       GK
Sbjct: 438 AD-SRLLVSGSADSTLKIWSI--KTKKLSQDLPGHADEIYAVDWSPDGVRVA----SGGK 490

Query: 326 EQLYVMQSN 334
           +++  +  N
Sbjct: 491 DKVLRLWQN 499



 Score = 40.0 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 58/184 (31%), Gaps = 14/184 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +    FSP+ + +A  + D      V   D             +  +L   +S
Sbjct: 137 LEGHKEAVISVAFSPDGKHLASGSGDT----TVRFWDIHTQTPHYTCEGHKHWVLCISWS 192

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP--DSSQIVFESDR 322
             G +   S  K+ ++ ++  +  +     + +T       S  + P   + + ++ +  
Sbjct: 193 PCGSKLA-SACKNGSIYLW--NPHTGKQIGKAMTGHKMWVTSLCWEPYHKNPECLYLASA 249

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                + +  +  +   R+      S     W   G  + ++        +   + DG  
Sbjct: 250 SKDCDIRIWDTKRAQTCRVLSGHTKSVTYIKW--GGSGLIYSASQDRTVKVWRAQ-DGVL 306

Query: 383 ERLL 386
            R L
Sbjct: 307 CRTL 310



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 51/151 (33%), Gaps = 7/151 (4%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+  L+S   D  + ++  +       R+T    +     ++P+   I   S     + +
Sbjct: 354 GEEKLVSGSDDFTLFLWKPEKDKKPIARMTGHQQLINDVKFAPNGRIIASASF---DKSI 410

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            + +S+        +    + +   WS    L+  +  +     I  +K     + L   
Sbjct: 411 KLWESSTGAYIASLRGHVQAIYSLAWSADSRLLV-SGSADSTLKIWSIKTKKLSQDLPGH 469

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
              + A  WSP G  +        D   +L+
Sbjct: 470 ADEIYAVDWSPDGVRVA---SGGKDKVLRLW 497


>gi|209518388|ref|ZP_03267212.1| 40-residue YVTN family beta-propeller repeat protein [Burkholderia
           sp. H160]
 gi|209501207|gb|EEA01239.1| 40-residue YVTN family beta-propeller repeat protein [Burkholderia
           sp. H160]
          Length = 492

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 67/203 (33%), Gaps = 26/203 (12%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----------RFSSNGKRALIS 275
            YA     + + V            R+G+      +P            +S +     + 
Sbjct: 44  VYAAEQFSNTVSVIDPADNRLVGLIRLGDPSPGNFSPLYKGQLLVHGMGYSPDHHTIAVV 103

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                +  +  +D Q+NA + +T        A ++PD  + V+ + R      YV   +G
Sbjct: 104 SI--GSNSVSFIDTQTNAVKHVTYVGRSPHEAFFTPDGKE-VWVTVRGEN---YVAVLDG 157

Query: 336 ---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
               +  RI+    A     ++SP G           +    V+     +    V  ++ 
Sbjct: 158 KTYEETTRIT--VPAGPGMQIFSPDGKYGYVCSSFNPETE--VVSVADHKIVGTVRQASP 213

Query: 393 QAPTWS--PSGRSLIFSRKKDGD 413
             P  +  P G+ + F+ K  G 
Sbjct: 214 FCPDLAATPDGKQVWFTLKDTGK 236



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 74/189 (39%), Gaps = 10/189 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+ ++V + T   E+ + V    T  +     +     M +   FS +GK   +    
Sbjct: 135 FTPDGKEV-WVTVRGENYVAVLDGKTYEETTRITVPAGPGMQI---FSPDGKYGYVCSSF 190

Query: 279 DEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +   ++ SV D +   T R  +    +++A+  PD  Q+ F     GK Q++      + 
Sbjct: 191 NPETEVVSVADHKIVGTVRQASPFCPDLAAT--PDGKQVWFTLKDTGKVQVFDAMPPFAL 248

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            K +      ++ + V + +G   A+    G    + V + D   +   +   NL    W
Sbjct: 249 IKTLDTGPITNHVNIVHNAKGTF-AYVTV-GGLNQVKVFRTDDFSQVATIPVGNLPHGLW 306

Query: 398 -SPSGRSLI 405
            S  G  + 
Sbjct: 307 PSGDGSRIY 315


>gi|152994807|ref|YP_001339642.1| oligogalacturonide lyase [Marinomonas sp. MWYL1]
 gi|150835731|gb|ABR69707.1| Oligogalacturonide lyase [Marinomonas sp. MWYL1]
          Length = 382

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/225 (9%), Positives = 65/225 (28%), Gaps = 31/225 (13%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDE---AMD 283
           +A +  +      +           I      +  P +   +        +         
Sbjct: 158 FAQFYHQKPRCRLISIDLKTGQRTTIFEENIWLGHPLYRPNDDNTIAFCHEGPHDLVETR 217

Query: 284 IYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           ++ +D   +   ++             + PD S+++F S R   ++  +   + +     
Sbjct: 218 MWMIDENGDNIRKVYEQSVEESCTHEFFVPDGSKMMFVSYRPNTDKRQLCSVDATSLAFK 277

Query: 342 SQDKEASYFDPVWSPQGDLIA-------------FTKFSGEKFAIGVMKKDGSQERLLVE 388
            + +  +    + +  G L+                        + ++    +  R + E
Sbjct: 278 VEAEMPACSHLMSNYDGTLVVGDGSGTPVDVADNTGHDIENDPNLYLINLSDASIRPITE 337

Query: 389 ------------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                         N   P+++P  +S+++S   +G     L ++
Sbjct: 338 HNTSWKVLNGDRQINHPHPSFTPDDKSVLYSSDVNGTPAIYLATL 382



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 43/108 (39%), Gaps = 8/108 (7%)

Query: 325 KEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSP-QGDLIAFTKFSGEKF---AIGVMKKD 379
           K +  ++  +    +R +  ++      P++ P   + IAF            + ++ ++
Sbjct: 165 KPRCRLISIDLKTGQRTTIFEENIWLGHPLYRPNDDNTIAFCHEGPHDLVETRMWMIDEN 224

Query: 380 GSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           G   R + E S  ++ T   + P G  ++F   +      +L S+D  
Sbjct: 225 GDNIRKVYEQSVEESCTHEFFVPDGSKMMFVSYRPNTDKRQLCSVDAT 272



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 67/189 (35%), Gaps = 28/189 (14%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDREGKE 326
           +G + LIS   D   + + +DLQ     +LT     N+   + +     ++F  +    +
Sbjct: 46  DGNKLLISANFDTERNYHLLDLQDETAIQLTEGKGDNVFGGFLTTQDDALIFVKN---NK 102

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQG---DLIA----------------FTKFS 367
           QL  +     +   + +  +       W P      ++A                F +F 
Sbjct: 103 QLIRVDLKNQEHSVLYEVAKGWVGYGTWVPNSACTKVVAIEIKDTDYMELDSWQKFAQFY 162

Query: 368 GEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSP-SGRSLIFSRKKDGDTG-SKLYSID 422
            +K    ++  D    +      E+  L  P + P    ++ F  +   D   ++++ ID
Sbjct: 163 HQKPRCRLISIDLKTGQRTTIFEENIWLGHPLYRPNDDNTIAFCHEGPHDLVETRMWMID 222

Query: 423 LNGRNETLI 431
            NG N   +
Sbjct: 223 ENGDNIRKV 231


>gi|13277350|ref|NP_075680.1| WD repeat-containing protein 61 isoform a [Mus musculus]
 gi|70778817|ref|NP_001020546.1| WD repeat-containing protein 61 isoform a [Mus musculus]
 gi|81917379|sp|Q9ERF3|WDR61_MOUSE RecName: Full=WD repeat-containing protein 61; AltName:
           Full=Meiotic recombination REC14 protein homolog
 gi|11139244|gb|AAG31640.1|AF309554_1 meiotic recombination protein REC14 [Mus musculus]
 gi|12850275|dbj|BAB28657.1| unnamed protein product [Mus musculus]
 gi|18605829|gb|AAH23026.1| WD repeat domain 61 [Mus musculus]
 gi|74198540|dbj|BAE39750.1| unnamed protein product [Mus musculus]
 gi|74210993|dbj|BAE25087.1| unnamed protein product [Mus musculus]
 gi|117574258|gb|ABK41113.1| CDW13/WDR61 [Mus musculus]
 gi|148693881|gb|EDL25828.1| WD repeat domain 61, isoform CRA_c [Mus musculus]
          Length = 305

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 113 AFSPDSQYLATGTHMGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 168 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 223

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 224 LAGTLSGHASWVLNVAFCPD 243



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 91/284 (32%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQ+  K   + P     +A 
Sbjct: 57  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQM--KSIDAGPVDAWTLA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 114 -FSPDSQYLAT---GTHMGKVNI--FGVESGKKEYSL--------------DTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L+      ++ ++ PD +           + + V   
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTHF---VSSSSDKSVKVWDV 261

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I V  
Sbjct: 262 GTRTCIHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHVYD 302


>gi|70985504|ref|XP_748258.1| hypothetical protein AFUA_5G00820 [Aspergillus fumigatus Af293]
 gi|66845886|gb|EAL86220.1| hypothetical protein AFUA_5G00820 [Aspergillus fumigatus Af293]
          Length = 638

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 52/156 (33%), Gaps = 20/156 (12%)

Query: 265 FSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           FS  G   L     ++   +D+++V + S A  RLT+        ++S D+   V    R
Sbjct: 295 FSGAGDEILYIGPTREANNVDLFAVHVTSGAVRRLTSHPEYADPIAFSHDNRWFVVMDTR 354

Query: 323 EGKEQLY---------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
               Q++         ++          +++  A  F          +         +  
Sbjct: 355 GSNRQMWMSGMQYVPPLIDLVTMTAASSTRNNGARRFFQPI------LVDRYGDRGSYFG 408

Query: 374 GVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIF 406
             +   G+     V D N      P +SP G  ++F
Sbjct: 409 QQVNAAGNGTSGSVNDPNWNGRADPAFSPDGTKIVF 444



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 9/152 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS    ++ Y     E              A +R+ +         FS + +  ++   +
Sbjct: 295 FSGAGDEILYIGPTREANNVDLFAVHVTSGAVRRLTSHPEYADPIAFSHDNRWFVVMDTR 354

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQLY---VMQ 332
                ++   +Q      L + + +  ++S   + ++  F+    DR G    Y    + 
Sbjct: 355 GSNRQMWMSGMQY--VPPLIDLVTMTAASSTRNNGARRFFQPILVDRYGDRGSYFGQQVN 412

Query: 333 SNGSDQKRISQDKEAS-YFDPVWSPQGDLIAF 363
           + G+       D   +   DP +SP G  I F
Sbjct: 413 AAGNGTSGSVNDPNWNGRADPAFSPDGTKIVF 444


>gi|295835651|ref|ZP_06822584.1| S9C family peptidase [Streptomyces sp. SPB74]
 gi|295825618|gb|EFG64359.1| S9C family peptidase [Streptomyces sp. SPB74]
          Length = 668

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 98/309 (31%), Gaps = 56/309 (18%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA----- 227
           F  + L+V E          L  +   G  +R+          EP F+P   +V      
Sbjct: 101 FGDQRLYVVEPDAPDSAPRPLTPVSSLGGGLRW---------CEPVFAPGGHEVWCVLEE 151

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-------ILAPRFSSNGKRALISVQKDE 280
           +   +  D+ RV         A +     R +       +  P+ S +G +A+       
Sbjct: 152 FTGEEPTDLRRVLAAVPLDGSAAEDRTAVRELTSETHRFVTGPKLSPDGAQAVW-----L 206

Query: 281 AMDIYSVDLQSNATER--------LTNTLFINISA-------SYSPDSSQIVFESDREGK 325
           A +   +                 LT+   +            ++P+ + +    +R   
Sbjct: 207 AWNHPRMPWDGTELRHADVTPEGALTDVRTLIGGPGEAVAQAEFTPEGALLAAT-ERGNW 265

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVW-------SP-QGDLIAFTKFSGEKFAIGVMK 377
             L+ +     +   +   +E +   P+W       +P  G L+A     G   A+G++ 
Sbjct: 266 WNLHRVDPASGEAVNLCPREEET-GGPLWKAGMRWFAPLDGGLVAMLHGRGGN-ALGILD 323

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-TGSKLYSIDLNGRNETLINTP-A 435
                           + + +  G  +  +    G  +G+++  +D    +  ++  P  
Sbjct: 324 PAAGTLVDAAGPWTEWSASLAAHGSRV--TGIAAGPASGAEIVQLDTGTGHARVVAAPHQ 381

Query: 436 YASDPQWVG 444
            A DP +  
Sbjct: 382 DAVDPAYYP 390


>gi|296413028|ref|XP_002836220.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295630029|emb|CAZ80411.1| unnamed protein product [Tuber melanosporum]
          Length = 836

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 70/188 (37%), Gaps = 17/188 (9%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A+       +L V+   +      K+ G+F +M     +S +G+R  I+   D  +
Sbjct: 312 GEWLAFGASKLGQLL-VWEWQSE-SYILKQQGHFDAMNSL-AYSPDGQRI-ITTADDGKV 367

Query: 283 DIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++  D  S       T       +  ++   + ++F +  +G  + + +     + +  
Sbjct: 368 KVW--DAASGFCIVTFTEHTSGVTACEFAKRGN-VLFTASLDGSVRAWDL-VRYRNFRTF 423

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TW 397
           +      +      P G+++         F I V        +LL E S  + P    ++
Sbjct: 424 AATSRLQFSTLAADPSGEIVCAGSLD--NFDIHVWNVQTG--QLLEELSGHEGPIASLSF 479

Query: 398 SPSGRSLI 405
           +P GR L 
Sbjct: 480 APDGRFLA 487



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 57/347 (16%), Positives = 112/347 (32%), Gaps = 65/347 (18%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           FN+I   S  Q   +  ++ R  +W + GA  L           +L V    W+ +    
Sbjct: 290 FNMIHTLSISQHGIDFVTVNRTGEWLAFGASKL----------GQLLV----WEWQSESY 335

Query: 139 IIGKK--------FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG--- 187
           I+ ++           SP   R I  T +DD    +      F         S V+    
Sbjct: 336 ILKQQGHFDAMNSLAYSPDGQRII--TTADDGKVKVWDAASGFCIVTFTEHTSGVTACEF 393

Query: 188 -IIKNSLCVMDRDGA----------NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               N L     DG+          N R    +           P+ + V   + D+   
Sbjct: 394 AKRGNVLFTASLDGSVRAWDLVRYRNFRTFAATSRLQFSTLAADPSGEIVCAGSLDN--- 450

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             +++ + +  +  + +      I +  F+ +G+    S   D  + I+S+  ++  +E 
Sbjct: 451 FDIHVWNVQTGQLLEELSGHEGPIASLSFAPDGRFLA-SGSWDNTVRIWSLFTRTQTSEP 509

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLY-------VMQSNG-----SDQKRISQD 344
           L       +  S+ PDS ++   S  +G+   +           +G       ++ I + 
Sbjct: 510 L-QLQSDVLRVSFRPDSRRLA-VSTLDGQITFWDVENAEQTSNIDGRKDISGGRRAIDRT 567

Query: 345 KEAS------YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             A+      +    +S  G  I     +G    I +         L
Sbjct: 568 TAANAPGSKHFTTINYSADGTCIL---AAGNSKYICLYDIASGTLVL 611


>gi|294936385|ref|XP_002781746.1| WD-repeat protein, putative [Perkinsus marinus ATCC 50983]
 gi|239892668|gb|EER13541.1| WD-repeat protein, putative [Perkinsus marinus ATCC 50983]
          Length = 523

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 62/151 (41%), Gaps = 9/151 (5%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V E ++SG    ++ +   D            +++   +FSP+ + +A A++D      V
Sbjct: 379 VGERILSGSDDFTMFLWSMDSKKPLCRLTGHQKVVNNVQFSPDGRMIASASFDK----SV 434

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            L D    +    +    + +    +S++  R L+S  KD  + ++  D      +    
Sbjct: 435 RLWDGVTGKFICALRGHVADVYMVSWSAD-SRMLVSGSKDSTVKVW--DAGKRKLKEDLP 491

Query: 300 TLFINISAS-YSPDSSQIVFESDREGKEQLY 329
                + A  +S D +++V  + R+   +++
Sbjct: 492 GHADEVFAVDWSGDGARVV-SAGRDKVVKIW 521


>gi|168183157|ref|ZP_02617821.1| hypothetical protein CBB_3046 [Clostridium botulinum Bf]
 gi|237796214|ref|YP_002863766.1| hypothetical protein CLJ_B3006 [Clostridium botulinum Ba4 str. 657]
 gi|182673681|gb|EDT85642.1| hypothetical protein CBB_3046 [Clostridium botulinum Bf]
 gi|229263693|gb|ACQ54726.1| hypothetical protein CLJ_B3006 [Clostridium botulinum Ba4 str. 657]
          Length = 429

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 85/223 (38%), Gaps = 32/223 (14%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  +  Y   D      +  ++       K   +F S I       NG+       +   
Sbjct: 111 SGNEKIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNIW-----INGQWLYYINYRGGN 165

Query: 282 MD--IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQLYVMQSN 334
            +  +Y +    ++ ERLTNT  I+ S  +S +    +F      S  +   ++Y ++ +
Sbjct: 166 EENCLYRIKKDGSSRERLTNTT-ID-SLVFSDN---YIFYSEYISSSSKDNYKIYRIKKD 220

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           GS++  +S  +  +         G  + +       ++I  ++ DG   + +   +N  +
Sbjct: 221 GSNKIALSNVRGINLIIQ-----GPFLYYLNIED-NYSIYRIRVDGLDMKKI---NNYSS 271

Query: 395 PTWS--PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            ++     G  + +    + + G+ LY   L+G  E  +N  +
Sbjct: 272 RSFMRIKDG-WIYYI---NEELGNNLYRTTLDGNYEEKLNNDS 310



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 77/190 (40%), Gaps = 31/190 (16%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--L 328
           +    +  +   +I  ++L  +   +L +    NI   +  +   + + + R G E+  L
Sbjct: 115 KIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNI---WI-NGQWLYYINYRGGNEENCL 170

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQER 384
           Y ++ +GS ++R++     +    V+S     I ++      S + + I  +KKDGS + 
Sbjct: 171 YRIKKDGSSRERLT---NTTIDSLVFSDN--YIFYSEYISSSSKDNYKIYRIKKDGSNKI 225

Query: 385 LLVEDSNLQAPTWSPSGRSLI---FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            L     +           +I   F    + +    +Y I ++G +   IN  +  S  +
Sbjct: 226 ALSNVRGIN---------LIIQGPFLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRSFMR 276

Query: 442 ----WVGFMD 447
               W+ +++
Sbjct: 277 IKDGWIYYIN 286


>gi|296221134|ref|XP_002756617.1| PREDICTED: transcription initiation factor TFIID subunit 5 isoform
           1 [Callithrix jacchus]
          Length = 800

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 472 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 531

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 532 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 587

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 588 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 644

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 645 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 699

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 700 HGLMVGELKGHTDTVCSLRFSRDGEILA 727



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 585 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 640

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 641 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 696

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 697 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 738


>gi|284052186|ref|ZP_06382396.1| WD-40 repeat protein [Arthrospira platensis str. Paraca]
          Length = 158

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 55/142 (38%), Gaps = 7/142 (4%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +Q K+      +       L     +   + +G   + + +  FS +GK    S   D+ 
Sbjct: 20  SQSKIFGIEAGEISAPGRSLWTLNPEADIRTLGGHSNSVRSVSFSGDGKMLA-SASADKT 78

Query: 282 MDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + ++  +L +    R        ++A ++SPD   I   S     + + +   N  ++ +
Sbjct: 79  IKLW--NLSNGEEIRTFEGHKSGVNAVAFSPDGQIIASGSQ---DKTIKLWDINTGEEIQ 133

Query: 341 ISQDKEASYFDPVWSPQGDLIA 362
                + +     ++P G++IA
Sbjct: 134 SLAGHKMAVNAITFAPNGEIIA 155



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 53/128 (41%), Gaps = 10/128 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            SL  ++ + A+IR L    + +     FS + + +A A+ D      + L +       
Sbjct: 37  RSLWTLNPE-ADIRTLGGHSNSVRSV-SFSGDGKMLASASADK----TIKLWNLSNGEEI 90

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASY 309
           +     +S + A  FS +G+    S  +D+ + ++  D+ +    + L        + ++
Sbjct: 91  RTFEGHKSGVNAVAFSPDGQIIA-SGSQDKTIKLW--DINTGEEIQSLAGHKMAVNAITF 147

Query: 310 SPDSSQIV 317
           +P+   I 
Sbjct: 148 APNGEIIA 155



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 46/127 (36%), Gaps = 9/127 (7%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              +++++ +      L        S S+S D   +   S     + + +   +  ++ R
Sbjct: 36  GRSLWTLNPE-ADIRTLGGHSNSVRSVSFSGDGKMLASAS---ADKTIKLWNLSNGEEIR 91

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWS 398
             +  ++      +SP G +IA          I +   +  +E   +    +   A T++
Sbjct: 92  TFEGHKSGVNAVAFSPDGQIIASGSQDKT---IKLWDINTGEEIQSLAGHKMAVNAITFA 148

Query: 399 PSGRSLI 405
           P+G  + 
Sbjct: 149 PNGEIIA 155


>gi|226468348|emb|CAX69851.1| platelet-activating factor acetylhydrolase, isoform Ib, alpha
           subunit [Schistosoma japonicum]
          Length = 448

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 76/209 (36%), Gaps = 12/209 (5%)

Query: 175 SRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +R+LF     V  S     S+ V D +     +        + +  F P+ + +A  + D
Sbjct: 124 TRVLFNPHYNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSGKLLASCSAD 183

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                +V L D  I +  K +      + + +F  +G   + S  +D+ + ++ V     
Sbjct: 184 M----QVKLWDLTIYQCIKTLTGHDHNVSSVKFLPSGDFLV-SASRDKTIKMWEVSTGYC 238

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               + +T +I  S   SP+ + +   S+      + +      + + + +  E      
Sbjct: 239 TKTFVGHTDWI-RSVCPSPEGNLLASCSN---DHTIRIWSVESRECQVVLRGHEHVVECI 294

Query: 353 VWSPQGDLI-AFTKFSGEKFAIGVMKKDG 380
            W+   + I + T  S        +  DG
Sbjct: 295 AWASHPESISSITNPSSGSGDPANVVADG 323


>gi|226468346|emb|CAX69850.1| platelet-activating factor acetylhydrolase, isoform Ib, alpha
           subunit [Schistosoma japonicum]
          Length = 448

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 76/209 (36%), Gaps = 12/209 (5%)

Query: 175 SRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +R+LF     V  S     S+ V D +     +        + +  F P+ + +A  + D
Sbjct: 124 TRVLFNPHYNVFVSASEDASIKVWDYETGEFEHTLKGHTDSVQDVAFDPSGKLLASCSAD 183

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                +V L D  I +  K +      + + +F  +G   + S  +D+ + ++ V     
Sbjct: 184 M----QVKLWDLTIYQCIKTLTGHDHNVSSVKFLPSGDFLV-SASRDKTIKMWEVSTGYC 238

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               + +T +I  S   SP+ + +   S+      + +      + + + +  E      
Sbjct: 239 TKTFVGHTDWI-RSVCPSPEGNLLASCSN---DHTIRIWSVESRECQVVLRGHEHVVECI 294

Query: 353 VWSPQGDLI-AFTKFSGEKFAIGVMKKDG 380
            W+   + I + T  S        +  DG
Sbjct: 295 AWASHPESISSITNPSSGSGDPANVVADG 323


>gi|256828448|ref|YP_003157176.1| hypothetical protein Dbac_0637 [Desulfomicrobium baculatum DSM
           4028]
 gi|256577624|gb|ACU88760.1| hypothetical protein Dbac_0637 [Desulfomicrobium baculatum DSM
           4028]
          Length = 331

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/248 (16%), Positives = 80/248 (32%), Gaps = 39/248 (15%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISV-----QKDEAM 282
           +    D + +Y     I       GN + +I    P   ++G+             +E  
Sbjct: 36  SRGAADDVLIYERQGWIWSCDGEGGNQKRLIRGARPGSCADGRLIAFFRPSEGKNPEEMS 95

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQK-- 339
           D++  D +S A  ++ + LF   S  +S   + + F   D     ++ V+ ++GS  +  
Sbjct: 96  DLWIYDAKSAAERKIASALFAASSPVWSGQGAWVAFLARDARSLTRIVVLAADGSGLRVP 155

Query: 340 -RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--------VEDS 390
            R   +          +PQ  L+     +        +   G   + +        +   
Sbjct: 156 LREGDEGAGFLCALSITPQDSLLVHDMSNA-----YWVDPAGGVLKSVPLEKIMGSLATG 210

Query: 391 NLQAPTWS---PSGRSLIFSRKKDG---------DTGSKLYSID---LNGRNETLINTPA 435
              + T+S        L+FS    G         +  S L   D     G+N  +     
Sbjct: 211 VTSSDTFSVCPADETVLVFSHAVRGTARFEKIMHEPSSALSLHDSWVGVGKNMQITPQDV 270

Query: 436 YASDPQWV 443
            A DP W 
Sbjct: 271 TAFDPVWS 278



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/250 (13%), Positives = 70/250 (28%), Gaps = 41/250 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL---RVYLMDTRIDRA 249
           +   D +G N + L          P    + + +A+    +           +      A
Sbjct: 52  IWSCDGEGGNQKRLIRG-----ARPGSCADGRLIAFFRPSEGKNPEEMSDLWIYDAKSAA 106

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-- 307
            ++I +      +P +S  G       +   ++    V     +  R+        +   
Sbjct: 107 ERKIASALFAASSPVWSGQGAWVAFLARDARSLTRIVVLAADGSGLRVPLREGDEGAGFL 166

Query: 308 ---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR---------ISQDKEASYFDPVWS 355
              S +P  S +V           Y +   G   K          ++    +S    V  
Sbjct: 167 CALSITPQDSLLV-----HDMSNAYWVDPAGGVLKSVPLEKIMGSLATGVTSSDTFSVCP 221

Query: 356 PQGDLIAFTK--FSGEKFAIGVMKKD------------GSQERLLVEDSNLQAPTWSPSG 401
               ++ F+       +F   + +              G   ++  +D     P WS  G
Sbjct: 222 ADETVLVFSHAVRGTARFEKIMHEPSSALSLHDSWVGVGKNMQITPQDVTAFDPVWSRDG 281

Query: 402 RSLIFSRKKD 411
           + + F   KD
Sbjct: 282 KRIYFIGYKD 291



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 70/243 (28%), Gaps = 37/243 (15%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            F      +    + L + D   A  R +  S       P +S     VA+   D   + 
Sbjct: 82  FFRPSEGKNPEEMSDLWIYDAKSAAERKI-ASALFAASSPVWSGQGAWVAFLARDARSLT 140

Query: 238 RVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           R+ ++          +         + A   +      +      +  + Y VD      
Sbjct: 141 RIVVLAADGSGLRVPLREGDEGAGFLCALSITPQDSLLV-----HDMSNAYWVDPAGGVL 195

Query: 295 ERL----------TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-- 342
           + +          T     +  +    D + +VF     G  +   +    S    +   
Sbjct: 196 KSVPLEKIMGSLATGVTSSDTFSVCPADETVLVFSHAVRGTARFEKIMHEPSSALSLHDS 255

Query: 343 ----------QDKEASYFDPVWSPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLL 386
                       ++ + FDPVWS  G  I F  +   +      F +  + + GS  + L
Sbjct: 256 WVGVGKNMQITPQDVTAFDPVWSRDGKRIYFIGYKDTQAADAELFRVLRVDRFGSGLKEL 315

Query: 387 VED 389
           V  
Sbjct: 316 VPG 318



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 13/84 (15%)

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRNET 429
           I     +G  ++ L+  +   +      GR + F R  +G      S L+  D     E 
Sbjct: 52  IWSCDGEGGNQKRLIRGARPGSCA---DGRLIAFFRPSEGKNPEEMSDLWIYDAKSAAER 108

Query: 430 LI-------NTPAYASDPQWVGFM 446
            I       ++P ++    WV F+
Sbjct: 109 KIASALFAASSPVWSGQGAWVAFL 132


>gi|195622562|gb|ACG33111.1| WD-repeat protein-like [Zea mays]
          Length = 446

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 64/205 (31%), Gaps = 14/205 (6%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           T  D+   +        +  + F++ +  SG+    +           +     +  +  
Sbjct: 228 TYDDNAITNAVEIFNTSSGAVHFIASNNDSGVRYYDMERFQL------FKHLQFEWPVNH 281

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              SP+++ V        D     L+D    +    I   R    A  +S +G+    + 
Sbjct: 282 ASLSPDRKVVVIV----GDDPDGLLIDANSGKTLHSIKGHRDYSFASAWSPDGRTFA-TG 336

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D+   I+     S +   L   L    S  ++ D     F S  E  + + V      
Sbjct: 337 NQDKTCRIWDARNLSKSVHVLRGNLGAIRSIRFTSDGQ---FMSMAEPADFVXVYDVKSD 393

Query: 337 DQKRISQDKEASYFDPVWSPQGDLI 361
             KR   D         +SP  D +
Sbjct: 394 YNKRQELDFFGEISGTSFSPDTDAL 418


>gi|195122566|ref|XP_002005782.1| GI18887 [Drosophila mojavensis]
 gi|193910850|gb|EDW09717.1| GI18887 [Drosophila mojavensis]
          Length = 959

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 83/266 (31%), Gaps = 34/266 (12%)

Query: 154 IAHTISDDIYQ---SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           + H++S   Y    ++    GD+   +   S  +        L V +             
Sbjct: 349 MIHSLSISDYPISTALFNNTGDW---VALASREIG------QLLVWEWQSEQYIMKQQGH 399

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
              +    +SP+ Q +A    D +    V L +T+            S +   +FS N K
Sbjct: 400 SSEMTCIAYSPDGQYIATGGEDSK----VKLWNTQSSFCFVTFSEHTSGVTGVQFSRN-K 454

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTL-------FINISASYSPDSSQIVFESDRE 323
           + L+S   D  +  + + ++       T+          I+ S        Q VF     
Sbjct: 455 KFLVSSSLDGTVRAFDI-IRYRNFRTFTSPTPAQFACVAIDFSGELVVAGGQDVF----- 508

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQ 382
              ++++          +    E       +SP          S  +   +    +  S+
Sbjct: 509 ---EIFLWSIKTGKLLEVISGHEGPVTSVAFSPVATSSTLISGSWDKTVKVWNCLESNSE 565

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSR 408
              +   S++    +SPSG  +  + 
Sbjct: 566 HETIDAISDVTCVAFSPSGEEIAVAT 591



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 45/110 (40%), Gaps = 6/110 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T++ N +  ++PD + ++      G  ++ V     +  + +S +   +Y +   SP G 
Sbjct: 13  TIYRNGNLVFTPDGNSVI---SPVGN-RITVYDLKNNKSRTLSLESYYNYTNIALSPDGS 68

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           L+      G    I ++       R   +   +Q   +SP G+    +R+
Sbjct: 69  LLIAVNEQGNAQLISMLSC-TVIHRHKFQTG-VQCINFSPDGKYFAVARE 116


>gi|159125811|gb|EDP50927.1| hypothetical protein AFUB_049280 [Aspergillus fumigatus A1163]
          Length = 638

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 52/156 (33%), Gaps = 20/156 (12%)

Query: 265 FSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           FS  G   L     ++   +D+++V + S A  RLT+        ++S D+   V    R
Sbjct: 295 FSGAGDEILYIGPTREANNVDLFAVHVTSGAVRRLTSHPEYADPIAFSHDNRWFVVMDTR 354

Query: 323 EGKEQLY---------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
               Q++         ++          +++  A  F          +         +  
Sbjct: 355 GSNRQMWMSGMRYVPPLIDLVTMTAASSTRNNGARRFFQPI------LVDRYGDRGSYFG 408

Query: 374 GVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIF 406
             +   G+     V D N      P +SP G  ++F
Sbjct: 409 QQVNAAGNGTSGSVNDPNWNGRADPAFSPDGTKIVF 444



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 51/152 (33%), Gaps = 9/152 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS    ++ Y     E              A +R+ +         FS + +  ++   +
Sbjct: 295 FSGAGDEILYIGPTREANNVDLFAVHVTSGAVRRLTSHPEYADPIAFSHDNRWFVVMDTR 354

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQLY---VMQ 332
                ++   +       L + + +  ++S   + ++  F+    DR G    Y    + 
Sbjct: 355 GSNRQMWMSGM--RYVPPLIDLVTMTAASSTRNNGARRFFQPILVDRYGDRGSYFGQQVN 412

Query: 333 SNGSDQKRISQDKEAS-YFDPVWSPQGDLIAF 363
           + G+       D   +   DP +SP G  I F
Sbjct: 413 AAGNGTSGSVNDPNWNGRADPAFSPDGTKIVF 444


>gi|126659179|ref|ZP_01730318.1| Serine/Threonine protein kinase with WD40 repeats [Cyanothece sp.
           CCY0110]
 gi|126619586|gb|EAZ90316.1| Serine/Threonine protein kinase with WD40 repeats [Cyanothece sp.
           CCY0110]
          Length = 315

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 56/169 (33%), Gaps = 16/169 (9%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              +  ++    SP+   +    +       + + D R  R  + I    S+  +   S 
Sbjct: 156 TRNNYGIYALAVSPDGNTL----FGGGGSSYIQIWDLRTKREIRAITGHSSVGRSLCISP 211

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGK 325
           +GK  +          I   DL++    RL+     +       +PD + ++   DR   
Sbjct: 212 DGKTLV----SGGDQRIKVWDLETGEA-RLSFYGHADLVRGVVITPDGNTLISAGDRF-- 264

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             + +   N   +    +  + +      S  G ++A +   G K  + 
Sbjct: 265 --IKMWDLNTGKKLNTVEAHDNAICALALSNDGTILA-SGGVGGKVKVW 310


>gi|330960978|gb|EGH61238.1| hypothetical protein PMA4326_20787 [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 377

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 68/187 (36%), Gaps = 26/187 (13%)

Query: 259 MILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
               PR   FS++G+   +  +    +  ++++  + A +++++   I      +P  ++
Sbjct: 198 QNSGPRHLAFSADGRFLYVVGEMSGTVTAFAINHTTGALKQVSHAEGIPERLKLAPGQAR 257

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
               +D +      +  ++                    +P    +  ++ +    ++  
Sbjct: 258 NARNNDLKDDPTPRIWAAD-----------------IRLAPDDKWLFISERTSSSVSVFK 300

Query: 376 MKKDGSQ----ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +     +    E   V++   +    SP+G  L+ S +K    GS  Y+I  +G  + + 
Sbjct: 301 VAPATGKLTFAENYPVQEKQPRNIAVSPNGHWLLVSGEKSDTVGS--YAIGPDGALQRVS 358

Query: 432 NTPAYAS 438
             P+   
Sbjct: 359 EAPSGKG 365


>gi|261330676|emb|CBH13661.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 616

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 67/232 (28%), Gaps = 31/232 (13%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ--QKVAYATYDDEDILRVY 240
            + S     ++ + D      R +       +     S +   +  A+     +   R  
Sbjct: 394 RIYSSSQDRTIIIWDSSNGAPRSVLRGHAHWVNFIALSTDLVIRTGAFDHECRKFDTREE 453

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +      R    +              +G+  L+S   D  M ++S   Q     R+T  
Sbjct: 454 MQQYATARYQDVLARL-----------DGRERLVSCSDDNTMFLWSPQQQVTPLGRMTGH 502

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   +SPD + I   S     + + +  ++        +   A+ +   WS    L
Sbjct: 503 QGAIFHIQFSPDGTMIASSS---ADKSVKLWNASDGKFITTFRGHVAAVYHVSWSLDSRL 559

Query: 361 IAFTKFSGEKFAIG-------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +  +        +        V    G  + +   D       WSP G+ + 
Sbjct: 560 LV-SGSRDSTLKLWSVSKRELVEDLSGHSDEIFSTD-------WSPDGQRVA 603



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 58/193 (30%), Gaps = 16/193 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +    FSP+ + +A           + L D       + +    S +    +S
Sbjct: 244 LDGHSEAVLIVSFSPDGELLA----TGGGDKEIRLWDVHTLTPTEELKGHTSWVQVLSWS 299

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSP---DSSQIVFESD 321
            +GK    S  KD ++ ++S + +S   +  R           S+ P   +SS   F S 
Sbjct: 300 PDGKYLA-SGSKDGSLIVWSGNGESGKYKGARHKAHSAYLTHVSWEPLHVNSSCNRFVS- 357

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              K+    +    +  +      +A      W  +G    ++        I        
Sbjct: 358 -ASKDTTLKVWHTVTGLQFSLSGHQAGVTCVKWGGEGR--IYSSSQDRTIIIW--DSSNG 412

Query: 382 QERLLVEDSNLQA 394
             R ++       
Sbjct: 413 APRSVLRGHAHWV 425



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 29/74 (39%), Gaps = 6/74 (8%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP G+L+A T    ++  +  +      E L    S +Q  +WSP G+ L       G
Sbjct: 255 SFSPDGELLA-TGGGDKEIRLWDVHTLTPTEELKGHTSWVQVLSWSPDGKYLA-----SG 308

Query: 413 DTGSKLYSIDLNGR 426
                L     NG 
Sbjct: 309 SKDGSLIVWSGNGE 322



 Score = 40.8 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 50/303 (16%), Positives = 98/303 (32%), Gaps = 42/303 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           DD+  S+ G++ +      F+    V+  ++++L    RD      L   R       R 
Sbjct: 152 DDLLNSMMGKEAEGTPYAFFIGGEQVNDSVRDTLFQKQRDDYVDTMLKEGR-------RV 204

Query: 220 SP-NQQKVAY-----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            P + +K+ +     A  + +   +       + R   ++      +L   FS +G+   
Sbjct: 205 RPQDVEKLTFELPEEAVVEIQFKPQAKFKVRPVTRCSGKLDGHSEAVLIVSFSPDGELLA 264

Query: 274 ISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                    +I   D+ +   TE L          S+SPD   +   S ++G   ++   
Sbjct: 265 ---TGGGDKEIRLWDVHTLTPTEELKGHTSWVQVLSWSPDGKYLASGS-KDGSLIVWSGN 320

Query: 333 SNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---- 387
                 K       ++Y   V W P          S  +F              +     
Sbjct: 321 GESGKYKGARHKAHSAYLTHVSWEP-----LHVNSSCNRFVSASKDTTLKVWHTVTGLQF 375

Query: 388 ----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
                 + +    W   GR  I+S  +  D    ++    NG   +++   A+     WV
Sbjct: 376 SLSGHQAGVTCVKWGGEGR--IYSSSQ--DRTIIIWD-SSNGAPRSVLRGHAH-----WV 425

Query: 444 GFM 446
            F+
Sbjct: 426 NFI 428


>gi|195176097|ref|XP_002028686.1| GL25362 [Drosophila persimilis]
 gi|194110583|gb|EDW32626.1| GL25362 [Drosophila persimilis]
          Length = 288

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 56/180 (31%), Gaps = 22/180 (12%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
                 D   V +      +         + + A +FS NGK    +V  D+++ IY  D
Sbjct: 1   MMLTASDDKSVKIWRVAKRQFLSSFSQQTNWVRAAKFSPNGKMIA-TVSDDKSLRIY--D 57

Query: 289 LQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           + +    R +T         ++ P  + +       G  ++ +    GS   ++     A
Sbjct: 58  VNTGECTRTITEERGAPRQVAWHPWGNMVAVA---LGCNRIKIFDVGGSQLLQLYVVHSA 114

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
              D  +S                 I V+   +G     L    + + A  +S  G    
Sbjct: 115 PVNDRKFSDD-------------CTIRVLDLLEGRPIYTLTGHTAAVNAVGFSQDGEKFA 161



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 44/152 (28%), Gaps = 21/152 (13%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +   +FSPN + +A  + D    LR+Y  D       + I   R       +   G  
Sbjct: 30  NWVRAAKFSPNGKMIATVSDD--KSLRIY--DVNTGECTRTITEERGAPRQVAWHPWGNM 85

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             +++       I   D+  +   +L            +S D +             + V
Sbjct: 86  VAVAL---GCNRIKIFDVGGSQLLQLYVVHSAPVNDRKFSDDCT-------------IRV 129

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +               A+     +S  G+  A
Sbjct: 130 LDLLEGRPIYTLTGHTAAVNAVGFSQDGEKFA 161


>gi|118096405|ref|XP_001232237.1| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 402

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/208 (13%), Positives = 71/208 (34%), Gaps = 14/208 (6%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            K+   +YD      V L D       + +    + +     S +G+R +++   D  + 
Sbjct: 61  SKILSCSYDR----TVKLWDVAKGFPVQILEEHTAPVSECNLSPDGRR-VVTSSYDNTVK 115

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRIS 342
            +  D+++           I  S + S D   +V  SD++    + V  + + ++   + 
Sbjct: 116 TW--DMETGKVLWTIEHEGIVTSCNISRDGKYVVSGSDKD--NAISVFDAVSATEVACVQ 171

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
               ++     + P    +    +        ++ +  S        + +    ++  GR
Sbjct: 172 GHHRSAITRCCFDPGNQRVTSVSYDKAIKLWDMVARSTSITIKEGHSNAISDCCFTSDGR 231

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            L  +     D   K++ I   G  ++ 
Sbjct: 232 YLCTASW---DKSLKIWDIK-TGEFQSR 255



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 62/185 (33%), Gaps = 11/185 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ ++V  ++YD+     V   D    +    I     ++ +   S +GK  +    KD
Sbjct: 99  SPDGRRVVTSSYDN----TVKTWDMETGKVLWTI-EHEGIVTSCNISRDGKYVVSGSDKD 153

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            A+ ++     +       +         + P  +Q V     +   +L+ M +  +   
Sbjct: 154 NAISVFDAVSATEVACVQGHHRSAITRCCFDP-GNQRVTSVSYDKAIKLWDMVARSTSIT 212

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVED--SNLQAP 395
            I +    +  D  ++  G  +    +      + I   +        L +    ++ + 
Sbjct: 213 -IKEGHSNAISDCCFTSDGRYLCTASWDKSLKIWDIKTGEFQSRGPVTLSQGHEGSVSSC 271

Query: 396 TWSPS 400
            +S  
Sbjct: 272 CFSQD 276


>gi|110638113|ref|YP_678322.1| outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
 gi|110280794|gb|ABG58980.1| possible outer membrane protein [Cytophaga hutchinsonii ATCC 33406]
          Length = 631

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 55/180 (30%), Gaps = 30/180 (16%)

Query: 260 ILAPRFSSNGKRALIS-----VQKDEAMDIYSVDLQSNATERLT-----NTLFINISASY 309
              P  +++GK    +      ++D+   + S  +    +E ++     N+     + S 
Sbjct: 168 QSHPVLTADGKTLYYTTLSGLSRQDDENIVTSSYVNGKWSEPVSISDNINSKENEGTCSI 227

Query: 310 SPDSSQIVFE----SDREGKEQLYVMQSNGSDQKRISQDKEA-----SYFDPVWSPQGDL 360
           S D + +VF     +D  G   +Y+ +   +   + +    A         P  S  G  
Sbjct: 228 SMDGNSLVFVGCGKADGLGSCDIYISKKVNNVWSKPTNLGPAVNSTSWDSHPSLSADGRT 287

Query: 361 IAFTKFSGEKF---AIGVMKKDGSQERLLV--------EDSNLQAPTWSPSGRSLIFSRK 409
           + F       F    I V   D                      +P     G +L FS  
Sbjct: 288 LYFVSARKGGFGKEDIYVTHLDEKGIWSPAQNAGSSVNTSGTEFSPFIHADGTTLYFSSN 347



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 55/192 (28%), Gaps = 30/192 (15%)

Query: 218 RFSPNQQKVAYATYDDEDIL-----RVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNG 269
             S +   + +      D L      +      +   P  +G   N  S    P  S++G
Sbjct: 226 SISMDGNSLVFVGCGKADGLGSCDIYISKKVNNVWSKPTNLGPAVNSTSWDSHPSLSADG 285

Query: 270 KRALISVQKDEAM---DIYSVDLQSNATERLT-------NTLFINISASYSPDSSQIVFE 319
           +       +       DIY   L                NT     S     D + + F 
Sbjct: 286 RTLYFVSARKGGFGKEDIYVTHLDEKGIWSPAQNAGSSVNTSGTEFSPFIHADGTTLYFS 345

Query: 320 SD----REGKEQLYVMQSNGS--DQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           S+      G +  Y   ++ +    K I    +  A+      +  G    +++F G   
Sbjct: 346 SNGLLGMGGLDIFYTTGNDTTWAVPKNIGYPLNTYANDETLFITVDGAKGYYSRFDGTNV 405

Query: 372 A----IGVMKKD 379
                I + + D
Sbjct: 406 NYNSRIFLYEFD 417



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 54/178 (30%), Gaps = 27/178 (15%)

Query: 216 EPRFSPNQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIG-----NFRSMILAPRFSS 267
            P  + + + + Y T      +D   +        +  + +      N +        S 
Sbjct: 170 HPVLTADGKTLYYTTLSGLSRQDDENIVTSSYVNGKWSEPVSISDNINSKENEGTCSISM 229

Query: 268 NGKRALIS----VQKDEAMDIYSVDLQSNATERLTN------TLFINISASYSPDSSQIV 317
           +G   +           + DIY     +N   + TN      +   +   S S D   + 
Sbjct: 230 DGNSLVFVGCGKADGLGSCDIYISKKVNNVWSKPTNLGPAVNSTSWDSHPSLSADGRTLY 289

Query: 318 FESDRE---GKEQLYVMQSNGSDQ------KRISQDKEASYFDPVWSPQGDLIAFTKF 366
           F S R+   GKE +YV   +             S +   + F P     G  + F+  
Sbjct: 290 FVSARKGGFGKEDIYVTHLDEKGIWSPAQNAGSSVNTSGTEFSPFIHADGTTLYFSSN 347



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 58/175 (33%), Gaps = 23/175 (13%)

Query: 273 LISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFES----DREGKE 326
           +   + D A+D+    +           NT F       + D   + + +     R+  E
Sbjct: 135 VYIAKCDFAIDMMKHPVDFKPVLMTPPINTAFAQSHPVLTADGKTLYYTTLSGLSRQDDE 194

Query: 327 QLYVMQS-NG--SDQKRISQDKEA--SYFDPVWSPQGDLIAFT---KFSG-EKFAIGVMK 377
            +      NG  S+   IS +  +  +      S  G+ + F    K  G     I + K
Sbjct: 195 NIVTSSYVNGKWSEPVSISDNINSKENEGTCSISMDGNSLVFVGCGKADGLGSCDIYISK 254

Query: 378 KDGSQERLLVE-------DSNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSIDLN 424
           K  +               S    P+ S  GR+L F   + G  G + +Y   L+
Sbjct: 255 KVNNVWSKPTNLGPAVNSTSWDSHPSLSADGRTLYFVSARKGGFGKEDIYVTHLD 309


>gi|312217135|emb|CBX97084.1| hypothetical protein [Leptosphaeria maculans]
          Length = 646

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 40/143 (27%), Gaps = 5/143 (3%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N + V       ED   +        +   R+   +  I    FS +G     S   D  
Sbjct: 363 NGEIVERLATASEDCTIILWTPLSSTKPVTRMTGHQKQINQVTFSPDGLLLA-SAAWDNH 421

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + ++S          L   +       +S DS  +   S       L V        K  
Sbjct: 422 VKLWSA-RDGKFLNTLRAHVGPVYMTCFSADSRLLASCSK---DTTLKVWDMRTGKLKED 477

Query: 342 SQDKEASYFDPVWSPQGDLIAFT 364
               +   F   WSP GD +   
Sbjct: 478 LPGHKDQVFALDWSPDGDRVTVV 500



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 90/319 (28%), Gaps = 55/319 (17%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT-GEKGDFNSRIL 178
                  E R+WD    KQI G          +  A+ I+   ++     E G       
Sbjct: 200 ASGGYDNEVRIWDPSTGKQIGG--------PLKGHANFITSLSWEPYHLQEPG------- 244

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
                V S     ++ V D  G  I Y        +   ++    +    +      +  
Sbjct: 245 --RPRVASSSKDGTVRVWDAIGGKIEYALAGHKSSVTCVKWGGTGRIYTASHDKTIKVWN 302

Query: 239 V------------------------YLMDTRIDRAPKRIGNFRSMILA---PRF----SS 267
                                    +++ T      +++ +     LA    RF    + 
Sbjct: 303 ASTGSLINTLSGHAHWVNHLALSTDFVLRTSYHDHTRKVPSTPEEKLAKAKQRFEKAATL 362

Query: 268 NGKRA--LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           NG+    L +  +D  + +++    +    R+T         ++SPD   +         
Sbjct: 363 NGEIVERLATASEDCTIILWTPLSSTKPVTRMTGHQKQINQVTFSPDGLLLA---SAAWD 419

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +  +         +      +   +S    L+A          +  M+    +E L
Sbjct: 420 NHVKLWSARDGKFLNTLRAHVGPVYMTCFSADSRLLASCS-KDTTLKVWDMRTGKLKEDL 478

Query: 386 LVEDSNLQAPTWSPSGRSL 404
                 + A  WSP G  +
Sbjct: 479 PGHKDQVFALDWSPDGDRV 497



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/81 (13%), Positives = 32/81 (39%), Gaps = 4/81 (4%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
              +    ++   FS + + +A  + D      + + D R  +  + +   +  + A  +
Sbjct: 435 TLRAHVGPVYMTCFSADSRLLASCSKDT----TLKVWDMRTGKLKEDLPGHKDQVFALDW 490

Query: 266 SSNGKRALISVQKDEAMDIYS 286
           S +G R  + +   + + + S
Sbjct: 491 SPDGDRVTVVLAYTQWIWLRS 511


>gi|218960421|ref|YP_001740196.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
 gi|167729078|emb|CAO79989.1| hypothetical protein; putative signal peptide [Candidatus
           Cloacamonas acidaminovorans]
          Length = 781

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 73/219 (33%), Gaps = 25/219 (11%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR----IDRAPKRIGNFR 257
           N   +  S D+       SP+   + + +       +  +            P+ +    
Sbjct: 285 NENPIYLSSDEGESHFTVSPDGTYLYFCSGRPAAFAKTNIWRAERLNNSWAYPELVEALS 344

Query: 258 SMILAP--RFSSNGKRALISV---QKDEAMDIYSVDLQSN--ATERLT--NTLFINISAS 308
           +        FSSNG RA +     Q  +  DIY+ D ++   +  RLT  N+    I   
Sbjct: 345 TNSDEALCSFSSNGMRAYLMGKYEQGRQDYDIYTSDDKNGWTSPVRLTAVNSDQQEIDPY 404

Query: 309 YSPDSSQIVFESDREGKEQLY----VMQSNGSDQKRISQDKEASYFDPVWSP----QGDL 360
              D   ++F S+R G    Y     + ++GS Q+  +     +      +P     G  
Sbjct: 405 VYQD-RLMLFSSNRPGGFGGYDIYLSIYNDGSWQRPFNLGANVNTAGDEIAPFLDWDGKT 463

Query: 361 IAFTK---FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           I F+         + I        + +      N+ AP 
Sbjct: 464 IFFSSNGYRGFGGYDIYKAVVLDGEAKTWSRAENVGAPV 502


>gi|119499391|ref|XP_001266453.1| hypothetical protein NFIA_041340 [Neosartorya fischeri NRRL 181]
 gi|119414617|gb|EAW24556.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
          Length = 633

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 22/157 (14%)

Query: 265 FSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           FS  G   L     ++   +D+++V + S A  RLT+        ++S D+   V    R
Sbjct: 287 FSGAGDEILYIGPTREANNVDLFAVHVTSGAVRRLTSHPEYADPIAFSHDNQWFVVMDTR 346

Query: 323 EGKEQLY---------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
               Q++         ++          +++  A  F          I   ++       
Sbjct: 347 GSNRQMWMSGMRYVPPLIDLVTMTAASSTRNNGARRFFQP-------ILIDRYGDRGSYF 399

Query: 374 GVM-KKDGSQERLLVEDSNLQA---PTWSPSGRSLIF 406
           G      G+     V D N      P +SP G  + F
Sbjct: 400 GQQVNAAGNGTSGSVNDPNWNGRADPAFSPDGTKIAF 436



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 52/152 (34%), Gaps = 9/152 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS    ++ Y     E              A +R+ +         FS + +  ++   +
Sbjct: 287 FSGAGDEILYIGPTREANNVDLFAVHVTSGAVRRLTSHPEYADPIAFSHDNQWFVVMDTR 346

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQLY---VMQ 332
                ++   +       L + + +  ++S   + ++  F+    DR G    Y    + 
Sbjct: 347 GSNRQMWMSGM--RYVPPLIDLVTMTAASSTRNNGARRFFQPILIDRYGDRGSYFGQQVN 404

Query: 333 SNGSDQKRISQDKEAS-YFDPVWSPQGDLIAF 363
           + G+       D   +   DP +SP G  IAF
Sbjct: 405 AAGNGTSGSVNDPNWNGRADPAFSPDGTKIAF 436


>gi|56752049|ref|YP_172750.1| peptidase [Synechococcus elongatus PCC 6301]
 gi|56687008|dbj|BAD80230.1| probable peptidase [Synechococcus elongatus PCC 6301]
          Length = 643

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 62/205 (30%), Gaps = 26/205 (12%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR-YLTPSR 210
            ++    +D +              I    +    G   +++  +   G      +    
Sbjct: 112 PELPLKFADGLIDRQRQRW------IGVREDHRPEGEAIDAIVAIPLTGEPSEGQILTIG 165

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRV--------YLMDTRIDRAPKRIGNFRSMILA 262
                 PR S + Q++A+ T+   ++           +L D  +    K  G  R  +  
Sbjct: 166 ADFYASPRLSADGQRLAWLTWSHPNMPWDGTELWVAEFLADGSLATPQKVAGGDRESVFQ 225

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-------SYSP-DSS 314
           P +  +G+   +S   D +            T+ +  T              +++P D  
Sbjct: 226 PEWLPDGRLGFVS---DRSSWWNLYSWDGQNTQAIAPTEAEFGLPQWVFGMRTWAPIDGD 282

Query: 315 QIVFESDREGKEQLYVMQSNGSDQK 339
           + +  S R G   L ++       K
Sbjct: 283 RWLAASTRAGHWSLSLVDLATGSLK 307



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 47/130 (36%), Gaps = 16/130 (12%)

Query: 326 EQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVMK-- 377
           + +  +   G   + +I       Y  P  S  G  +A+  +S          + V +  
Sbjct: 145 DAIVAIPLTGEPSEGQILTIGADFYASPRLSADGQRLAWLTWSHPNMPWDGTELWVAEFL 204

Query: 378 KDGSQER-LLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            DGS      V   + ++   P W P GR L F   +   +   LYS D     + +  T
Sbjct: 205 ADGSLATPQKVAGGDRESVFQPEWLPDGR-LGFVSDRS--SWWNLYSWDGQ-NTQAIAPT 260

Query: 434 PAYASDPQWV 443
            A    PQWV
Sbjct: 261 EAEFGLPQWV 270



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 68/192 (35%), Gaps = 21/192 (10%)

Query: 191 NSLCVMD--RDG--ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD--- 243
             L V +   DG  A  + +     + +F+P + P+  ++ + + D      +Y  D   
Sbjct: 196 TELWVAEFLADGSLATPQKVAGGDRESVFQPEWLPDG-RLGFVS-DRSSWWNLYSWDGQN 253

Query: 244 TRIDRAPKRIGNFRSMILAPR-FSS-NGKRALISVQKDEAMDIYSVDLQSNATE----RL 297
           T+     +        +   R ++  +G R L +  +     +  VDL + + +      
Sbjct: 254 TQAIAPTEAEFGLPQWVFGMRTWAPIDGDRWLAASTRAGHWSLSLVDLATGSLKPFDLPF 313

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T+   + +         + +F +    +    +     S + ++ +   +   DP +   
Sbjct: 314 TDISGLVVE------GDRALFTAANTDRPGAVIELQISSGEWQVLKSSSSLDLDPRYLSI 367

Query: 358 GDLIAFTKFSGE 369
              I+F   +G 
Sbjct: 368 PQSISFPSANGR 379


>gi|330941837|gb|EGH44575.1| hypothetical protein PSYPI_20243 [Pseudomonas syringae pv. pisi
           str. 1704B]
          Length = 377

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 68/186 (36%), Gaps = 26/186 (13%)

Query: 260 ILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              PR   FSS+GK   +  +    +  ++++ ++   ++ +    I    + +P  ++ 
Sbjct: 199 NTGPRHLAFSSDGKFLYVVGEMSGTVTAFAINQKTGVLKQTSQADGIPKRLNLAPGQARD 258

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              +D +      +  ++                    +P G  +  ++ +    ++  +
Sbjct: 259 ARNNDLKDDPTPRIWAAD-----------------IRLAPNGKWLFISERTSSSVSVFKV 301

Query: 377 KKDGSQE----RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +    +        V++   +    SP+GR L+ S +K    GS  Y+I   G  + +  
Sbjct: 302 EPTSGKVAFVDNYPVQEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIGEEGALQRVSE 359

Query: 433 TPAYAS 438
            P+   
Sbjct: 360 APSGKG 365


>gi|328770337|gb|EGF80379.1| hypothetical protein BATDEDRAFT_2171 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 357

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 58/182 (31%), Gaps = 15/182 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDR 322
           +SS   +  I++ K     +Y  +  + + +    T       S  ++ D S +   +D 
Sbjct: 77  WSSK-NQLAIALDK----TVYIWNADTGSVQEFCQTADDNFITSLQWTADGSYLAVGTD- 130

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G  Q++ + SN      I   +  +    V S    +++     G  +   V   +   
Sbjct: 131 NGDAQIWDLDSNSK----IRTMRGRNSRVGVLSWDKHILSSGSRDGSIWHHDVRIANHKV 186

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
             LL   S +    W P G+ L        D    ++ I       T     A      W
Sbjct: 187 AELLGHSSEVCGLKWRPDGQMLA---SGGNDNLVNIWDIRSTTPKFTKTEHMAAVKALAW 243

Query: 443 VG 444
             
Sbjct: 244 CP 245


>gi|254497845|ref|ZP_05110611.1| hypothetical protein LDG_2215 [Legionella drancourtii LLAP12]
 gi|254352923|gb|EET11692.1| hypothetical protein LDG_2215 [Legionella drancourtii LLAP12]
          Length = 487

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 57/184 (30%), Gaps = 21/184 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISV 276
             SP+  +V Y        +  Y ++       +           A   S NGK   ++ 
Sbjct: 223 AVSPDGLRV-YVANSGSSDITAYNINQSTGALSQFNTFAAGSGPSAIAISPNGKFVYVTN 281

Query: 277 QKDEAMDIYSVDLQSNATERL------TNTLFINISASYSPDSSQIVFESDREGKE-QLY 329
                +  Y+++  +     +      +    I +S +     ++ V+  +R G     +
Sbjct: 282 ANGNNIYAYTLNATTGVLTDVGHFAVGSQPDGIAVSPN-----NEFVYAVNRNGYTISAF 336

Query: 330 VMQSNGSDQKRISQDKEASYFDP---VWSPQGDLIAFTKFSGEKFA----IGVMKKDGSQ 382
            + +       I+    A+   P   + SP G  +     +G  +     I +   D   
Sbjct: 337 TIDATTGLLTPIAGSPFATGTYPTRIIVSPNGLFVYVAANNGPGYQYDDSIWIYAIDTGS 396

Query: 383 ERLL 386
             L 
Sbjct: 397 GALT 400


>gi|218191818|gb|EEC74245.1| hypothetical protein OsI_09449 [Oryza sativa Indica Group]
          Length = 375

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 76/240 (31%), Gaps = 59/240 (24%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+   +A+   ++E  + +Y   T        +     ++    +S +  + + +V 
Sbjct: 17  AWSPDHSMIAFCPNNNE--VHIYKFFTDKWEKLHVLSKHDQIVSGIDWSRSSNKIV-TVS 73

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISAS--------------YSPDSSQIVFESDRE 323
            D    +++                 +   +              +SP  ++    S   
Sbjct: 74  HDRNSYVWT-------------QEGHDWVPTLVILKVNRAALCVQWSPKENKFAVGS--- 117

Query: 324 GKEQLYVMQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV---- 375
           G + + +      +     K + +  E+S     W P   L+A T   G+   +      
Sbjct: 118 GAKSVCICYYEQDNNWWISKVVRKKHESSVTSVAWHPNNILLATTSTDGKCRVLSTFIKG 177

Query: 376 MKKDGSQERLLVEDSNLQ-------------APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +   GS      +    +                WSPSG++L ++        S +Y ID
Sbjct: 178 VDTRGSHASTSTDWKFGEQIAQLDLSSMWAFGVRWSPSGKTLAYA-----GHNSMIYFID 232


>gi|310793817|gb|EFQ29278.1| WD domain-containing protein [Glomerella graminicola M1.001]
          Length = 606

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/265 (12%), Positives = 80/265 (30%), Gaps = 35/265 (13%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            ++   GD +   +  + +            +       + ++    + + + R SP+ +
Sbjct: 165 RLSSTNGDGDGVDMGATATTPVTPAPTKKGPVRPRFEEQQVMSGHAGKPVSQVRISPDGR 224

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +A A+ D      + L D         +    + +    +S +      S   D+A+ +
Sbjct: 225 WIASASADG----TIKLWDAATGEHMDTLVGHMAGVSCVAWSPDSGTLA-SGSDDKAIRL 279

Query: 285 Y---------------------SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           +                     +    +     L       +  ++SP  + +   S   
Sbjct: 280 WDRVTGRPKSTAKGVGALAKDGAAPPSARPMPPLRGHHNYVMCLAFSPKGNILASGSY-- 337

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ- 382
             E +++         R             +   G L+      G    I +      Q 
Sbjct: 338 -DEAVFLWDVRAGRLMRSLPAHSDPVGGIDFCGDGTLVVSCSTDG---LIRIWDTYTGQC 393

Query: 383 ERLLVEDSN--LQAPTWSPSGRSLI 405
            R LV + N  + +  ++P+GR ++
Sbjct: 394 LRTLVHEDNPAVTSVCFAPNGRFVL 418


>gi|312078619|ref|XP_003141817.1| Eif3s9 protein [Loa loa]
 gi|307763019|gb|EFO22253.1| Eif3s9 protein [Loa loa]
          Length = 697

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 74/238 (31%), Gaps = 38/238 (15%)

Query: 218 RFSPNQQKVAYA---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           R+SP +  +AY       D     + LM+    +  +    F        ++ NG R   
Sbjct: 332 RWSPTRPIIAYYCDERTSDNAPAEIGLMEIPSKKKLRAQRIFSVSEAELFWNKNGDRLAA 391

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             ++ +  +I +    S A E +        + +                   + +  + 
Sbjct: 392 HTERYQKKNIKT--SASGAVEEI-----KYTNPT-----------------SHIEIFDAR 427

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDL--IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           G D   +S     S+    W P GD   +           I  +       +L+ +   +
Sbjct: 428 GKDISVLSMPLSESFIAFDWEPSGDKFCVLVGSQHKSTPLIYYLDTTKHAPQLISKFEPM 487

Query: 393 QAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT---PAYASDPQWVG 444
           +  +   W+P+G  L+      G     +  ID NG   T  N    P +     W  
Sbjct: 488 ERFSDVLWAPAGGWLVVFS--AGTASGNIMFIDSNGTRPTRTNLVEYPGFNK-GSWDP 542



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/245 (15%), Positives = 76/245 (31%), Gaps = 23/245 (9%)

Query: 126 VEFRLWDVKDRKQIIGKK-FFSSPASW-------RKIAHTISDDIYQSITGEKGDFNSRI 177
            E  L ++  +K++  ++ F  S A         R  AHT   + YQ     K   +  +
Sbjct: 354 AEIGLMEIPSKKKLRAQRIFSVSEAELFWNKNGDRLAAHT---ERYQK-KNIKTSASGAV 409

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV-AYATYDDEDI 236
             +  +  +      + + D  G +I  L+    +      + P+  K         +  
Sbjct: 410 EEIKYTNPTSH----IEIFDARGKDISVLSMPLSESFIAFDWEPSGDKFCVLVGSQHKST 465

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             +Y +DT    AP+ I  F  M       ++  G   ++      + +I  +D      
Sbjct: 466 PLIYYLDT-TKHAPQLISKFEPMERFSDVLWAPAGGWLVVFSAGTASGNIMFIDSNGTRP 524

Query: 295 ER--LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
            R  L      N   S+ P            G +     +      + + +         
Sbjct: 525 TRTNLVEYPGFN-KGSWDPTGRYFTAACTIGGGKGDTGYRIYTFQGRELYRKPLDRLMQF 583

Query: 353 VWSPQ 357
            W P+
Sbjct: 584 KWRPR 588


>gi|47117222|sp|Q8C092|TAF5_MOUSE RecName: Full=Transcription initiation factor TFIID subunit 5;
           AltName: Full=Transcription initiation factor TFIID 100
           kDa subunit; Short=TAF(II)100; Short=TAFII-100;
           Short=TAFII100
 gi|26327795|dbj|BAC27638.1| unnamed protein product [Mus musculus]
          Length = 801

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 473 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 532

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 533 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 588

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + Y P+S+ +  
Sbjct: 589 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRYHPNSNYVAT 645

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 646 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 700

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 701 HGLMVGELKGHTDTVCSLRFSRDGEILA 728



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 586 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRYHPNSN 641

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 642 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 697

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 698 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 739


>gi|299536219|ref|ZP_07049532.1| dipeptidyl peptidase family protein [Lysinibacillus fusiformis ZC1]
 gi|298728205|gb|EFI68767.1| dipeptidyl peptidase family protein [Lysinibacillus fusiformis ZC1]
          Length = 757

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 60/166 (36%), Gaps = 15/166 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            S +G     S   +   +++   ++  S    R++N+   +++  +  D++ +++  D+
Sbjct: 175 LSPDGNYITFSSAWENRSNVFVKKMNDDS-EPVRVSNSKDRDVAGFFWKDNN-LLYVKDK 232

Query: 323 EG--KEQLYVMQSNGSDQKRISQDKE---ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            G     +Y    NGS++K ++                    LI   K     F +  + 
Sbjct: 233 GGDENFHIYSTTFNGSEEKDLTPYPNVTVGILSGLQGVKDEILIMMNKEDATVFDVYKLN 292

Query: 378 KDGSQERLLVEDSNLQAPTWSPS--GR-SLIFSRKKDGDTGSKLYS 420
               +   + ++      +W     G   +  +   DG  G+ LY 
Sbjct: 293 VKTGETTHVAKNPGNIT-SWLADRNGNVRIAIAS--DGVEGTILYR 335



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 45/119 (37%), Gaps = 16/119 (13%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV--MK 377
           S+ EG +++ V              K    F    SP G+ I F+     +  + V  M 
Sbjct: 151 SNHEGVKEISVED----------FMKNPGNFGYELSPDGNYITFSSAWENRSNVFVKKMN 200

Query: 378 KDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTP 434
            D    R+   +D ++    W  +   L++ + K GD    +YS   NG  E  L   P
Sbjct: 201 DDSEPVRVSNSKDRDVAGFFWKDNN--LLYVKDKGGDENFHIYSTTFNGSEEKDLTPYP 257



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 75/234 (32%), Gaps = 37/234 (15%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   + +++   E+   V++     D  P R+ N +   +A  F  +    L    K 
Sbjct: 176 SPDGNYITFSSAW-ENRSNVFVKKMNDDSEPVRVSNSKDRDVAGFFWKD-NNLLYVKDKG 233

Query: 280 E--AMDIYSVDLQSNATERLTNTL----FINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                 IYS     +  + LT        I        D   I+   +      +Y +  
Sbjct: 234 GDENFHIYSTTFNGSEEKDLTPYPNVTVGILSGLQGVKDEILIMMNKEDATVFDVYKLNV 293

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---- 389
              +   ++++             G++ ++         I +   DG +  +L  D    
Sbjct: 294 KTGETTHVAKNP------------GNITSWLADRNGNVRIAIAS-DGVEGTILYRDSEKD 340

Query: 390 ----------SNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                      +   P  +S   + + ++    G    ++   DL G  E +++
Sbjct: 341 EFKPFIEMEAGDEVMPLAFSKDNQYI-YATSNKGRDKVEVVKYDLKGNEEVIMS 393


>gi|239981023|ref|ZP_04703547.1| peptide hydrolase [Streptomyces albus J1074]
          Length = 598

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 54/291 (18%), Positives = 94/291 (32%), Gaps = 28/291 (9%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           D   R LFVS +  +      L   DR     R +T   +    +   +P+ + V + + 
Sbjct: 21  DAPDRALFVSNATGT----YELYAWDRATGAQRQVTDRPNG-TTDGVLTPDGEAVWWFSD 75

Query: 232 DDEDILRVYLMDTRIDRA--PKRIGNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVD 288
            D D   V++          P   G   S         + +  A++    DE      + 
Sbjct: 76  TDGDEFGVWMRQPFGGGEDVPAVPGLEPSYPAGLAIGRDARSTAVVGRSTDEDGSTIHLV 135

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRI---- 341
               A   +            S D + +  E    G      L V++  G   + +    
Sbjct: 136 RDGGAPAVVYRHRESAGVGDLSRDGTLLAVEHTEHGDAMHSALRVLRLGGGPGEPLALET 195

Query: 342 ------SQDKEASYFDPV--WSP-QGD-LIAFTKFSGEKFAIGVMK-KDGSQERLLVEDS 390
                 ++  E      V  +SP +GD  +        ++   V    DGSQ  L +E  
Sbjct: 196 VAELDDTRGGEEELGLAVMGFSPVEGDTRLLIGHQRRGRWEPMVWDVADGSQTELPIELP 255

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              +  W P G  L+ +     +  S+L+  DL       ++TPA      
Sbjct: 256 GDVSAEWYPDGSGLLIA--HSFEARSELWRYDLAAGTLARVDTPAGTVSGA 304



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 57/178 (32%), Gaps = 16/178 (8%)

Query: 262 APRFS--------SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           APR S         +  RAL         ++Y+ D  + A  ++T+          +PD 
Sbjct: 10  APRVSLPEWAEDAPD--RALFVSNATGTYELYAWDRATGAQRQVTDRPNGTTDGVLTPDG 67

Query: 314 SQIVFESDREGKEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSG 368
             + + SD +G E    M+     G D   +   + +              A        
Sbjct: 68  EAVWWFSDTDGDEFGVWMRQPFGGGEDVPAVPGLEPSYPAGLAIGRDARSTAVVGRSTDE 127

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNG 425
           +   I +++  G+   +     +      S  G  L     + GD   S L  + L G
Sbjct: 128 DGSTIHLVRDGGAPAVVYRHRESAGVGDLSRDGTLLAVEHTEHGDAMHSALRVLRLGG 185



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 54/178 (30%), Gaps = 18/178 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP------- 250
           RDG     +   R+        S +   +A    +  D +   L   R+   P       
Sbjct: 136 RDGGAPAVVYRHRESAGVG-DLSRDGTLLAVEHTEHGDAMHSALRVLRLGGGPGEPLALE 194

Query: 251 -------KRIGNFRSMILAPRFSS-NG-KRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                   R G     +    FS   G  R LI  Q+    +    D+   +   L   L
Sbjct: 195 TVAELDDTRGGEEELGLAVMGFSPVEGDTRLLIGHQRRGRWEPMVWDVADGSQTELPIEL 254

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             ++SA + PD S ++     E + +L+          R+      +       P G 
Sbjct: 255 PGDVSAEWYPDGSGLLIAHSFEARSELWRYDLAAGTLARVDT-PAGTVSGATARPDGT 311


>gi|149277133|ref|ZP_01883275.1| putative peptidase [Pedobacter sp. BAL39]
 gi|149232010|gb|EDM37387.1| putative peptidase [Pedobacter sp. BAL39]
          Length = 630

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 20/145 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFS 367
           SPD   I +      +  LYV        K I++ ++ S     W    +LI +  +  +
Sbjct: 45  SPDGLNISYFKLEGDRLNLYVEAIASGKSKMITRMEDKSILFYFWVSNNELIYYKESDVA 104

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP---------SGRSLIFSRKKDGDTGSKL 418
             +  I ++ KDG QER L +D        S           GR L+ S  +   T   +
Sbjct: 105 SHRSDIFIIGKDGKQERQLSKDDT------SRLRILEDQLIDGRYLLVSSNQRDSTVFDV 158

Query: 419 YSIDL-NGRNETLINTPAYASDPQW 442
           Y +++ NG  E     P   ++  W
Sbjct: 159 YRLNVRNGEMEMAAKNPGNITE--W 181


>gi|148693879|gb|EDL25826.1| WD repeat domain 61, isoform CRA_a [Mus musculus]
          Length = 347

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 155 AFSPDSQYLATGTHMGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 209

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 210 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 265

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 266 LAGTLSGHASWVLNVAFCPD 285



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 91/284 (32%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQ+  K   + P     +A 
Sbjct: 99  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQM--KSIDAGPVDAWTLA- 155

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 156 -FSPDSQYLAT---GTHMGKVNI--FGVESGKKEYSL--------------DTRGKFILS 195

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 196 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 250

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L+      ++ ++ PD +           + + V   
Sbjct: 251 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTHF---VSSSSDKSVKVWDV 303

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I V  
Sbjct: 304 GTRTCIHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHVYD 344


>gi|17988652|ref|NP_541285.1| vegetatible incompatibility protein HET-E-1 [Brucella melitensis
           bv. 1 str. 16M]
 gi|225686745|ref|YP_002734717.1| WD-repeat family protein [Brucella melitensis ATCC 23457]
 gi|256043857|ref|ZP_05446778.1| WD-repeat family protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|260565033|ref|ZP_05835518.1| WD-repeat family protein [Brucella melitensis bv. 1 str. 16M]
 gi|265990278|ref|ZP_06102835.1| WD-repeat family protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|17984458|gb|AAL53549.1| vegetatible incompatibility protein het-e-1 [Brucella melitensis
           bv. 1 str. 16M]
 gi|225642850|gb|ACO02763.1| WD-repeat family protein [Brucella melitensis ATCC 23457]
 gi|260152676|gb|EEW87769.1| WD-repeat family protein [Brucella melitensis bv. 1 str. 16M]
 gi|263000947|gb|EEZ13637.1| WD-repeat family protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|326411148|gb|ADZ68212.1| WD-repeat family protein [Brucella melitensis M28]
 gi|326554440|gb|ADZ89079.1| WD-repeat family protein [Brucella melitensis M5-90]
          Length = 324

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 93/281 (33%), Gaps = 28/281 (9%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           + GK   +     R +    +  +   +      + + +       V      +      
Sbjct: 55  VDGKSLVTGGEDGR-VCRIDAKGVVTELANIPRKWITAVATGPNGTVGFASGKTAWSRAA 113

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG    +    +++ +    F+P  Q++A A Y+        L+       P  +  ++ 
Sbjct: 114 DGKVQEFT---QERSVEGIAFAPKGQRLAIARYNG-----ATLIWAGTAAKPVEL-EWKG 164

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +   FS +G+  + S+Q++ A+  +   L+ N   R+T         S+S  +  +  
Sbjct: 165 AHIGITFSPDGRFLITSMQEN-ALHGWR--LEDNKHMRMTGYPAKVKDWSWSAKAKWLA- 220

Query: 319 ESDREGKEQLYVMQSNGSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                G     V    G D         +    ++        P G+ IA   ++     
Sbjct: 221 ---TSGAPAAIVWPFAGKDGPMGKAPLELGLRGDSMVTSVACHP-GEDIAAIGYNDG--M 274

Query: 373 IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKD 411
           I +++    +E LL       + +  W   G  L+F  +  
Sbjct: 275 ILIVRFADQKEVLLRRPGKGAITSMAWDEDGYRLVFGSQAG 315



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 28/202 (13%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----F 302
               +       +L+   + +GK  +      E   +  +D +      L N        
Sbjct: 36  DDGHQTSTVHDGLLSAAMAVDGKSLV---TGGEDGRVCRIDAK-GVVTELANIPRKWITA 91

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +    +       + F S     +  +   ++G  Q+     +E S     ++P+G  +A
Sbjct: 92  VATGPN-----GTVGFAS----GKTAWSRAADGKVQE---FTQERSVEGIAFAPKGQRLA 139

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +++G      +     ++   L         T+SP GR LI S +++   G +L    
Sbjct: 140 IARYNGATL---IWAGTAAKPVELEWKGAHIGITFSPDGRFLITSMQENALHGWRL---- 192

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            + ++  +   PA   D  W  
Sbjct: 193 EDNKHMRMTGYPAKVKDWSWSA 214


>gi|330825310|ref|YP_004388613.1| 40-residue YVTN family beta-propeller repeat-containing protein
           [Alicycliphilus denitrificans K601]
 gi|329310682|gb|AEB85097.1| 40-residue YVTN family beta-propeller repeat protein
           [Alicycliphilus denitrificans K601]
          Length = 348

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 73/237 (30%), Gaps = 22/237 (9%)

Query: 212 QILFEPRF---SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            +   P     SP+  ++AY T   ++ + V     R   A   +G F       RFS +
Sbjct: 121 PVGMHPAHVVVSPDG-RLAYVTNGGDNTVTVIDTAARSHVATIPVGQFP---HGLRFSPD 176

Query: 269 GKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           GK   ++  K   +    +D  S     ++           ++PD  ++ F S   G+  
Sbjct: 177 GKEVYVANLKGGTVS--VIDTASQKEVAQVPTGKGP-AQTGFTPDG-RLAFASL-SGENA 231

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDG-SQE 383
           + V+        R              +P    +        K     + ++  +     
Sbjct: 232 IAVIDPATRKVIRKVAVGTVPIQLYA-TPDSRTLLVANQGTRKMPGKTVSMIDLETFKVV 290

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           + +V  +          GR   +      ++ S L   D+  R  T       A + 
Sbjct: 291 KTVVTGAGAHGVVVDREGRY-AYVTNIYANSVSML---DVKDRKVTKTVPVGKAPNG 343


>gi|291452888|ref|ZP_06592278.1| peptide hydrolase [Streptomyces albus J1074]
 gi|291355837|gb|EFE82739.1| peptide hydrolase [Streptomyces albus J1074]
          Length = 604

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 54/291 (18%), Positives = 94/291 (32%), Gaps = 28/291 (9%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           D   R LFVS +  +      L   DR     R +T   +    +   +P+ + V + + 
Sbjct: 27  DAPDRALFVSNATGT----YELYAWDRATGAQRQVTDRPNG-TTDGVLTPDGEAVWWFSD 81

Query: 232 DDEDILRVYLMDTRIDRA--PKRIGNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVD 288
            D D   V++          P   G   S         + +  A++    DE      + 
Sbjct: 82  TDGDEFGVWMRQPFGGGEDVPAVPGLEPSYPAGLAIGRDARSTAVVGRSTDEDGSTIHLV 141

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRI---- 341
               A   +            S D + +  E    G      L V++  G   + +    
Sbjct: 142 RDGGAPAVVYRHRESAGVGDLSRDGTLLAVEHTEHGDAMHSALRVLRLGGGPGEPLALET 201

Query: 342 ------SQDKEASYFDPV--WSP-QGD-LIAFTKFSGEKFAIGVMK-KDGSQERLLVEDS 390
                 ++  E      V  +SP +GD  +        ++   V    DGSQ  L +E  
Sbjct: 202 VAELDDTRGGEEELGLAVMGFSPVEGDTRLLIGHQRRGRWEPMVWDVADGSQTELPIELP 261

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              +  W P G  L+ +     +  S+L+  DL       ++TPA      
Sbjct: 262 GDVSAEWYPDGSGLLIA--HSFEARSELWRYDLAAGTLARVDTPAGTVSGA 310



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 57/178 (32%), Gaps = 16/178 (8%)

Query: 262 APRFS--------SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           APR S         +  RAL         ++Y+ D  + A  ++T+          +PD 
Sbjct: 16  APRVSLPEWAEDAPD--RALFVSNATGTYELYAWDRATGAQRQVTDRPNGTTDGVLTPDG 73

Query: 314 SQIVFESDREGKEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFT--KFSG 368
             + + SD +G E    M+     G D   +   + +              A        
Sbjct: 74  EAVWWFSDTDGDEFGVWMRQPFGGGEDVPAVPGLEPSYPAGLAIGRDARSTAVVGRSTDE 133

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNG 425
           +   I +++  G+   +     +      S  G  L     + GD   S L  + L G
Sbjct: 134 DGSTIHLVRDGGAPAVVYRHRESAGVGDLSRDGTLLAVEHTEHGDAMHSALRVLRLGG 191



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 54/178 (30%), Gaps = 18/178 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP------- 250
           RDG     +   R+        S +   +A    +  D +   L   R+   P       
Sbjct: 142 RDGGAPAVVYRHRESAGVG-DLSRDGTLLAVEHTEHGDAMHSALRVLRLGGGPGEPLALE 200

Query: 251 -------KRIGNFRSMILAPRFSS-NG-KRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                   R G     +    FS   G  R LI  Q+    +    D+   +   L   L
Sbjct: 201 TVAELDDTRGGEEELGLAVMGFSPVEGDTRLLIGHQRRGRWEPMVWDVADGSQTELPIEL 260

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             ++SA + PD S ++     E + +L+          R+      +       P G 
Sbjct: 261 PGDVSAEWYPDGSGLLIAHSFEARSELWRYDLAAGTLARVDT-PAGTVSGATARPDGT 317


>gi|283833943|ref|ZP_06353684.1| 6-phosphogluconolactonase [Citrobacter youngae ATCC 29220]
 gi|291070615|gb|EFE08724.1| 6-phosphogluconolactonase [Citrobacter youngae ATCC 29220]
          Length = 331

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 75/235 (31%), Gaps = 18/235 (7%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 2   KQTVYTASPESQQIHVWSLNHEGSLTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 61

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPDSS-QIVFE-SDREGKEQLYVMQSNGSDQKR 340
            Y +     A   +     +  S +  S D   + VF  S   G   + V +        
Sbjct: 62  AYRIAPDDGALTFV-AESALPGSPTHISTDHKGRFVFVGSYNAGS--VSVTRLEDGLPVA 118

Query: 341 ISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNL 392
           +    E          SP   ++       ++  +  + +DG        E   VE +  
Sbjct: 119 LVDVVEGLDGCHSANISPDNRILWVPALKQDRICLFDVSEDGHLVAQEPAEVTTVEGAGP 178

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
           +   + P+ +   +   +   +       D +G+ E   TL   P   SD +W  
Sbjct: 179 RHMVFHPN-KQYAYCVNELNSSVDVWELKDPHGKIECVQTLDMMPTDFSDTRWAA 232


>gi|188991156|ref|YP_001903166.1| peptidase [Xanthomonas campestris pv. campestris str. B100]
 gi|167732916|emb|CAP51112.1| peptidase [Xanthomonas campestris pv. campestris]
          Length = 778

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 82/279 (29%), Gaps = 54/279 (19%)

Query: 198 RDGANIRYLTPSRDQILFE---PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            DG + R  +  R +  ++     +SP+ Q++A          RV  ++       + + 
Sbjct: 202 ADGQSTRLSSDGRAEDFYDLESVAWSPDSQQLAVYRVRPGYARRVTRVEAAPPGGGQPLV 261

Query: 255 NFR---------------------------------SMILAP-RFSSNGKRALISVQKDE 280
           + +                                    L+P ++ S+ +       +  
Sbjct: 262 HTQLYPKPGDAVDVERPVLFALDGSRREVDTELFGNPYALSPLQWRSDSRSVSFEYVQRG 321

Query: 281 AMDIYSVDLQSNATERLTN-----TLFINISASYSPD----SSQIVFESDREGKEQLYVM 331
              +  + + +               F+    S+  D      +I++ S+R+G   LY+ 
Sbjct: 322 FQRMRVIAVDAQTARAHVAVGEDAHTFVYADRSFRHDVEGRGDEILWISERDGWRHLYLF 381

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKF------SGEKFAIGVMKKDGSQER 384
                  KR          D +        I FT              +  +  DG Q  
Sbjct: 382 DGRSGKIKRQLTRGAWIVRDVLRVDDAQRRIWFTASGMDAGKDPYYRQLYSVDFDGRQLT 441

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKK-DGDTGSKLYSID 422
            L           +P G+  + +  + D     +L++ID
Sbjct: 442 RLTHSDADHDVAIAPDGQHYVDTYSRPDLPPVMELHAID 480



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 93/306 (30%), Gaps = 77/306 (25%)

Query: 107 GAQVLVTGRVIKEGKDRLRVE----FRL------WDVKDRKQIIGKKFFSSPASWRKIAH 156
           G Q LV  ++  +  D + VE    F L       D     ++ G  +  SP  WR  + 
Sbjct: 256 GGQPLVHTQLYPKPGDAVDVERPVLFALDGSRREVDT----ELFGNPYALSPLQWRSDSR 311

Query: 157 TISDDIYQSITGE----------------KGDFNSRILFVSES---VVSGIIKNSLCVMD 197
           ++S +  Q                      G+     ++   S    V G     L + +
Sbjct: 312 SVSFEYVQRGFQRMRVIAVDAQTARAHVAVGEDAHTFVYADRSFRHDVEGRGDEILWISE 371

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           RDG    YL   R   +        ++++    +   D+LRV                  
Sbjct: 372 RDGWRHLYLFDGRSGKI--------KRQLTRGAWIVRDVLRVDDAQ-------------- 409

Query: 258 SMILAPRFSSNGKRALISVQKDEA------MDIYSVDLQSNATERLTNTLFINISASYSP 311
                       +R   +    +A        +YSVD       RLT++   +   + +P
Sbjct: 410 ------------RRIWFTASGMDAGKDPYYRQLYSVDFDGRQLTRLTHSDA-DHDVAIAP 456

Query: 312 DSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           D    V    R     +  + + +G   +++ Q          W      +A  K    +
Sbjct: 457 DGQHYVDTYSRPDLPPVMELHAIDGRLLQQVEQGSIDKLQAAGWRAPETFVA--KGRDGR 514

Query: 371 FAIGVM 376
             I  M
Sbjct: 515 TDIWGM 520


>gi|167526242|ref|XP_001747455.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774290|gb|EDQ87922.1| predicted protein [Monosiga brevicollis MX1]
          Length = 894

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 29/184 (15%)

Query: 201 ANIRYLTP-SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            N+  L        +++  F P+       + D        + D R  +    +   R  
Sbjct: 727 QNVEVLHQEGHSMPVYDIAFHPDGSLAGTTSLDCYGR----IWDLRTGKNILVLTGHRQQ 782

Query: 260 ILAPRFSSNGKRALISVQKDEAMDI---------YSVDLQSNATERLTNTLFINISASYS 310
           +L+  FS NG     +   D  + I         Y++   +N   +L           Y 
Sbjct: 783 VLSIDFSPNGFHVA-TASDDHTVRIWDLRKSTCVYTMPAHTNLISQL----------RYH 831

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P  +  V  S     +   V Q+      R  +  E+       SP   LIA + +    
Sbjct: 832 PSGNFFVTSSY---DKTAKVWQAPECTPVRTLKGHESRIMSIDVSPDASLIATSSYD-RS 887

Query: 371 FAIG 374
           F + 
Sbjct: 888 FKLW 891



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 91/290 (31%), Gaps = 32/290 (11%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           +   PA        ++D      +        R+       V+   +    + +      
Sbjct: 540 YHEGPAELEVARRFLADYSLPRASERLKAARLRLAKTDREEVATKQRTLARLQE---FIA 596

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           +       + L   RFSP+ + +A +++       V L      +  K +      + A 
Sbjct: 597 QASEVGDTRPLSHCRFSPDGKSLAISSWSG----LVKLWSVPDCKLQKTLKGHEERVSAV 652

Query: 264 RFSSN-------GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            +          G   L S   + A+ ++S++  +   + L         A + P     
Sbjct: 653 EWHPRSGLDQQPGAINLASCDMNGAVHLWSMEKDT-PLQTLDGHDMRVARARFHPSGR-- 709

Query: 317 VF--ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFA 372
            F   +  +   +L+ ++ N     +  +      +D  + P G L   T     G  + 
Sbjct: 710 -FLGTTCFDESWRLFDLEQNVEVLHQ--EGHSMPVYDIAFHPDGSLAGTTSLDCYGRIWD 766

Query: 373 IGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +      G    +L      + +  +SP+G  +  +     D   +++ +
Sbjct: 767 LRT----GKNILVLTGHRQQVLSIDFSPNGFHVATASD---DHTVRIWDL 809


>gi|148693880|gb|EDL25827.1| WD repeat domain 61, isoform CRA_b [Mus musculus]
          Length = 302

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 110 AFSPDSQYLATGTHMGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 164

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 165 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 220

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 221 LAGTLSGHASWVLNVAFCPD 240



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 91/284 (32%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQ+  K   + P     +A 
Sbjct: 54  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQM--KSIDAGPVDAWTLA- 110

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 111 -FSPDSQYLAT---GTHMGKVNI--FGVESGKKEYSL--------------DTRGKFILS 150

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 151 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 205

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L+      ++ ++ PD +           + + V   
Sbjct: 206 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTHF---VSSSSDKSVKVWDV 258

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I V  
Sbjct: 259 GTRTCIHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHVYD 299


>gi|119600571|gb|EAW80165.1| notchless homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
          Length = 483

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 101 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 156

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEA------SYFDPVWS 355
            +S S+SPD  ++       G    Q+ +   +   Q   +    +      S+     +
Sbjct: 157 VLSISWSPDGRKLA-----SGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHAN 211

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + +     G  ER+L     ++    W   G  L++S  +D
Sbjct: 212 PECRYVASSSKDGS---VRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 264



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 338 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 394

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 395 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 453

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 454 ADEVYAVDWSPDGQRVA 470



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 129 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLA---SGCKNGQILLWDPST 185

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ I+           LT  
Sbjct: 186 GKQVGRTLAGHSKWITGLSWEPLHANPECRYVA-SSSKDGSVRIWDT-TAGRCERILTGH 243

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 244 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 296



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 300 RTGAFEPAEASVNPQDLQGSLQELKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 356

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 357 AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 394

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 395 KLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAM 448

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 449 DLPGHADEVYAVDWSPDGQRVA 470


>gi|119600572|gb|EAW80166.1| notchless homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
          Length = 485

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 158

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEA------SYFDPVWS 355
            +S S+SPD  ++       G    Q+ +   +   Q   +    +      S+     +
Sbjct: 159 VLSISWSPDGRKLA-----SGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHAN 213

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + +     G  ER+L     ++    W   G  L++S  +D
Sbjct: 214 PECRYVASSSKDGS---VRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 266



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 396

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 455

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 456 ADEVYAVDWSPDGQRVA 472



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 131 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLA---SGCKNGQILLWDPST 187

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ I+           LT  
Sbjct: 188 GKQVGRTLAGHSKWITGLSWEPLHANPECRYVA-SSSKDGSVRIWDT-TAGRCERILTGH 245

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 246 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 302 RTGAFEPAEASVNPQDLQGSLQELKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 358

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 359 AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 396

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 397 KLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAM 450

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 451 DLPGHADEVYAVDWSPDGQRVA 472


>gi|62234461|ref|NP_060566.2| notchless protein homolog 1 isoform a [Homo sapiens]
 gi|296439488|sp|Q9NVX2|NLE1_HUMAN RecName: Full=Notchless protein homolog 1
          Length = 485

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 158

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEA------SYFDPVWS 355
            +S S+SPD  ++       G    Q+ +   +   Q   +    +      S+     +
Sbjct: 159 VLSISWSPDGRKLA-----SGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHAN 213

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + +     G  ER+L     ++    W   G  L++S  +D
Sbjct: 214 PECRYVASSSKDGS---VRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 266



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 396

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 455

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 456 ADEVYAVDWSPDGQRVA 472



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 131 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLA---SGCKNGQILLWDPST 187

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ I+           LT  
Sbjct: 188 GKQVGRTLAGHSKWITGLSWEPLHANPECRYVA-SSSKDGSVRIWDT-TAGRCERILTGH 245

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 246 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 302 RTGAFEPAEASVNPQDLQGSLQELKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 358

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 359 AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 396

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 397 KLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAM 450

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 451 DLPGHADEVYAVDWSPDGQRVA 472


>gi|134111398|ref|XP_775615.1| hypothetical protein CNBD5690 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50258277|gb|EAL20968.1| hypothetical protein CNBD5690 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 550

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 80/245 (32%), Gaps = 41/245 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +     +++      P+  ++A  ++D +  +     MD R+        N    +    
Sbjct: 107 ILKDHTKVVSALAVDPSGARIATGSHDYDTKLWDFGGMDHRLKPFKSFEANGNYYVHDLS 166

Query: 265 FSSNGKRALI--------SVQKDEAM-------DIYSVDLQSNATERLTNTLFINISA-S 308
           +S +G++ L+           ++          D+Y  D+++      TN     I+A +
Sbjct: 167 YSPDGQQLLVISGTVHPKVFNRNGEDEMEFNKGDVYLRDMKN------TNGHTAEINAGA 220

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-----QDKEASYFDPVWSPQGDLIAF 363
           + P    I      +   +++   +    ++ I      +          WSP G  IA 
Sbjct: 221 WHPTDKSIFLTCSNDSTLRIWDTSNKRKQKQVIVVKSKERGARTKVTACAWSPDGKWIAG 280

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE-------DSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
               G    + +     +  R           +++     +S  G  +     + GD   
Sbjct: 281 VCLDGT---LHIWDTSSNFARPKYSCENAHPKNTDTTGVAFSRDGLRVA---TRGGDDTV 334

Query: 417 KLYSI 421
           KL+ I
Sbjct: 335 KLWDI 339


>gi|315225026|ref|ZP_07866844.1| dipeptidyl-peptidase IV [Capnocytophaga ochracea F0287]
 gi|314945001|gb|EFS97032.1| dipeptidyl-peptidase IV [Capnocytophaga ochracea F0287]
          Length = 724

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 79/265 (29%), Gaps = 59/265 (22%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--------------- 263
           FSP    +A+   D+  +    L+D     A  +   +  M   P               
Sbjct: 203 FSPKGNYLAFYQKDESKVADYPLVDITTTPATLKAIKYP-MAGQPSEQAAVGIYDFQSGK 261

Query: 264 -----------------RFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFIN 304
                             +S + +  L+    +      +   D ++       NT+F  
Sbjct: 262 VSYLDINTTDEHFLTNLAWSPDERYILLVEVNRAQNHFALNRYDARTGKRV---NTIFEE 318

Query: 305 ISASYSPDSSQIVFE----------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +A +       VF           S+R+G   +Y    NG   K++S  +        +
Sbjct: 319 RNAKWVEPEKPAVFLPNNANEFLWLSERDGFTNVYHYNVNGKLIKQVSNFRWVVQDILGF 378

Query: 355 SPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS- 407
             QG  + F   +G        F I +      +  +L  ++       S  G+ L+ S 
Sbjct: 379 DAQGKYV-FITGTGADPREQHCFKIELKNP--KKVTVLTPEAGTHNVQLSSDGKYLLDSY 435

Query: 408 RKKDGDTGSKLYSIDLNGRNETLIN 432
                     L + D  G  + L+ 
Sbjct: 436 SSVSVPQNIDLVNTD-KGSRQRLLT 459



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 68/199 (34%), Gaps = 36/199 (18%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPD 312
           N   +     FS  G       QKDE+   D   VD+ +           I    +  P 
Sbjct: 193 NEFGINKGIFFSPKGNYLAF-YQKDESKVADYPLVDITTTPATL----KAIKYPMAGQPS 247

Query: 313 SSQIV----FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKF 366
               V    F+S      ++  +  N +D+  ++        +  WSP    I       
Sbjct: 248 EQAAVGIYDFQS-----GKVSYLDINTTDEHFLT--------NLAWSPDERYILLVEVNR 294

Query: 367 SGEKFAIGVMKK-DGSQERLLVEDSNL-----QAPT-WSPSG-RSLIFSRKKDGDTGSKL 418
           +   FA+       G +   + E+ N      + P  + P+     ++  ++DG T   +
Sbjct: 295 AQNHFALNRYDARTGKRVNTIFEERNAKWVEPEKPAVFLPNNANEFLWLSERDGFT--NV 352

Query: 419 YSIDLNGRNETLINTPAYA 437
           Y  ++NG+    ++   + 
Sbjct: 353 YHYNVNGKLIKQVSNFRWV 371


>gi|291385518|ref|XP_002709400.1| PREDICTED: WD repeat-containing protein 1 isoform 1 [Oryctolagus
           cuniculus]
          Length = 605

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 62/212 (29%), Gaps = 59/212 (27%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++ + +++A      E    V+L D+        +G                       
Sbjct: 108 AWTEDSKRIAVVGEGREKFGAVFLWDSGSS-----VGEITGHN----------------- 145

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 I SVD++ +   RL      N +A +             EG    +        
Sbjct: 146 ----KVINSVDIRQSRPYRLATGSDDNCAAFF-------------EGPPFKFKFTIG--- 185

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNL 392
                 D         +SP G+  A     G    I +      ++          D  +
Sbjct: 186 ------DHSRFVNCVRFSPDGNRFATASADG---QIYIYDGKTGEKVCALGEGKAHDGGI 236

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            A +WSP    L+      GD  SK++ +++N
Sbjct: 237 YAISWSPDSTHLL---SASGDKTSKIWDVNVN 265



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 8/91 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMI 260
           ++      + +   RFSP+  + A A+ D     ++Y+ D +       +G  +     I
Sbjct: 181 KFTIGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGEGKAHDGGI 236

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            A  +S +    L S   D+   I+ V++ S
Sbjct: 237 YAISWSPDSTHLL-SASGDKTSKIWDVNVNS 266


>gi|225434135|ref|XP_002277631.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 344

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/260 (15%), Positives = 85/260 (32%), Gaps = 25/260 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S   +  L  +  D  N   +       + + +++ +  ++  A+ D      +   D 
Sbjct: 72  GSHEREIFLWYVHGDCKN-FMVLKGHKNAILDLQWTTDGTQIISASPDK----TLRAWDV 126

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  K++    S + +   S  G   ++S   D    ++  D++     +     +  
Sbjct: 127 ETGKQIKKMAEHSSFVNSCCPSRRGPPLVVSGSDDGTAKLW--DMRQRGAIQTFPDKYQI 184

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + S+S D+S  +F    +    + V     ++     Q  +        SP G  +  T
Sbjct: 185 TAVSFS-DASDKIFTGGID--NDVKVWDLRRNEVTMTLQGHQDMITGMQLSPDGSYLL-T 240

Query: 365 KFSGEKFAIGVMKKDGSQER--LLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGS 416
                K  I  M+    Q R   ++E             +WSP G  +       G +  
Sbjct: 241 NGMDCKLCIWDMRPYAPQNRCVKILEGHQHNFEKNLLKCSWSPDGSKV-----TAGSSDR 295

Query: 417 KLYSIDLNGRNETLINTPAY 436
            +Y  D   R   L   P +
Sbjct: 296 MVYIWDTTSR-RILYKLPGH 314


>gi|26354080|dbj|BAC40670.1| unnamed protein product [Mus musculus]
          Length = 801

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 473 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 532

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 533 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 588

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 589 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 645

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 646 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 700

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 701 HGLMVGELKGHTDTVCSLRFSRDGEILA 728



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 586 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 641

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 642 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 697

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 698 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 739


>gi|332828410|gb|EGK01119.1| hypothetical protein HMPREF9455_02641 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 644

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 3/81 (3%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKD 411
            SP G   ++T    ++  I V K    S  R+  E     A   W  + R ++F +   
Sbjct: 50  ISPDGKYFSYTAPYEKRMNIYVQKIGQDSAVRITSETERDIAGYLWGNNNR-ILFLKDTG 108

Query: 412 GDTGSKLYSIDLNGRNETLIN 432
           GD   +LY ++++G N   + 
Sbjct: 109 GDENYQLYGVNIDGSNPLPLT 129



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 3/81 (3%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD     + +  E +  +YV +       RI+ + E      +W    + I F K +G 
Sbjct: 51  SPDGKYFSYTAPYEKRMNIYVQKIGQDSAVRITSETERDIAGYLWG-NNNRILFLKDTGG 109

Query: 370 --KFAIGVMKKDGSQERLLVE 388
              + +  +  DGS    L  
Sbjct: 110 DENYQLYGVNIDGSNPLPLTA 130



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 72/174 (41%), Gaps = 7/174 (4%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG- 324
           S +GK    +   ++ M+IY   +  ++  R+T+    +I+     ++++I+F  D  G 
Sbjct: 51  SPDGKYFSYTAPYEKRMNIYVQKIGQDSAVRITSETERDIAGYLWGNNNRILFLKDTGGD 110

Query: 325 -KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP--QGDLIA-FTKFSGEKFAIGVMKKDG 380
              QLY +  +GS+   ++  ++         P    ++I    K + + F    +  + 
Sbjct: 111 ENYQLYGVNIDGSNPLPLTAFEKVRTQIIDDLPEIDSEVIIGLNKRNPQIFDPYRLNIET 170

Query: 381 SQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            +  +L E   N+Q       G+ L  +   DG   S LY        + LI T
Sbjct: 171 GELTMLAENPGNIQGWMTDHDGK-LRVATAIDGVNQSLLYRDKEEDAFKVLITT 223


>gi|291301145|ref|YP_003512423.1| hypothetical protein Snas_3673 [Stackebrandtia nassauensis DSM
           44728]
 gi|290570365|gb|ADD43330.1| hypothetical protein Snas_3673 [Stackebrandtia nassauensis DSM
           44728]
          Length = 337

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 66/183 (36%), Gaps = 19/183 (10%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G   L S    +      +          T+      + + SPD   I + +D  G   
Sbjct: 52  DGDEGLASWTTGDPTRTEVIPPG-------TDDGLYGQTGAISPDGEYIAYMTDDVGGAN 104

Query: 328 LYVMQSNGSDQKRISQDKEAS-----YFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGS 381
             +++    D  +I++  E S        P W+P    +   K S      G +   DGS
Sbjct: 105 GNLIKVRDLDTGKITKVAEYSGQQKTCSFPTWAPDSQRLLVDKGSDFDDRAGFVDIADGS 164

Query: 382 -QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                +    +++A   +  G   ++S  K  ++   +Y  D +G+ +++    A  +  
Sbjct: 165 FDPVAVPHPCDMRA---AKDGS--VYSTAKADNSTVDVYVTDADGKTKSVGAAKAVEAAS 219

Query: 441 QWV 443
           +W 
Sbjct: 220 EWS 222



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 67/202 (33%), Gaps = 15/202 (7%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF--EPRFSPNQQKVAYA 229
           D  +   + + S   G    +      D      + P  D  L+      SP+ + +AY 
Sbjct: 38  DSLTGTFYEAVSNSDGDEGLASWTTG-DPTRTEVIPPGTDDGLYGQTGAISPDGEYIAYM 96

Query: 230 TYD----DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           T D    + ++++V  +DT            +     P ++ + +R L+    D      
Sbjct: 97  TDDVGGANGNLIKVRDLDTGKITKVAEYSGQQKTCSFPTWAPDSQRLLVDKGSDFDDRAG 156

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG-----SDQKR 340
            VD+   + + +      ++ A+   D S             +YV  ++G        K 
Sbjct: 157 FVDIADGSFDPVAVPHPCDMRAA--KDGSVYSTAKADNSTVDVYVTDADGKTKSVGAAKA 214

Query: 341 ISQDKEASYFD-PVWSPQGDLI 361
           +    E S       SP G  +
Sbjct: 215 VEAASEWSLVGLGAVSPDGRFL 236



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 39/121 (32%), Gaps = 13/121 (10%)

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V      +Q+  S     ++++ V +  GD    +  +G+     V+           +D
Sbjct: 25  VTAVADGNQRAASDSLTGTFYEAVSNSDGDEGLASWTTGDPTRTEVIPPG-------TDD 77

Query: 390 SNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLN-GRNETLINTPAYA---SDPQWV 443
               Q    SP G  + +     G     L  + DL+ G+   +          S P W 
Sbjct: 78  GLYGQTGAISPDGEYIAYMTDDVGGANGNLIKVRDLDTGKITKVAEYSGQQKTCSFPTWA 137

Query: 444 G 444
            
Sbjct: 138 P 138


>gi|73668772|ref|YP_304787.1| hypothetical protein Mbar_A1242 [Methanosarcina barkeri str.
           Fusaro]
 gi|72395934|gb|AAZ70207.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 810

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 60/185 (32%), Gaps = 11/185 (5%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +    +     V    T I     ++G     I       NGK A ++  +D  +    +
Sbjct: 484 FVYITNNGAFSVIDTATGIVITSVKVGRGPEGI---AVIPNGKTAYVANSRDNNVS--VI 538

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           D  +N      N        + +PD +++   +       + V+ +  +     +   E+
Sbjct: 539 DTTTNTVIATVNVGRDPSEVAVTPDGTKVYVTNYNS--NNVSVIDTATNTVIA-TMPVES 595

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIF 406
                  SP G  +  T ++    +  V+    ++ +  +    +      SP G  +  
Sbjct: 596 GPSGVAISPDGTKVYVTNYNSNTTS--VIDTATNKVKATINVGEHPWGVAVSPDGTKVYV 653

Query: 407 SRKKD 411
           +   D
Sbjct: 654 TTYYD 658



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 81/272 (29%), Gaps = 48/272 (17%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           F + D      I   K    P     I +  +  +  S        ++    V  +V  G
Sbjct: 493 FSVIDTATGIVITSVKVGRGPEGIAVIPNGKTAYVANSRDNNVSVIDTTTNTVIATVNVG 552

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQ-----------ILFEP--------RFSPNQQKVAY 228
              + + V   DG  +     + +            I   P          SP+  KV Y
Sbjct: 553 RDPSEVAVTP-DGTKVYVTNYNSNNVSVIDTATNTVIATMPVESGPSGVAISPDGTKV-Y 610

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            T  + +   V    T   +A   +G           S +G +  ++       D+  +D
Sbjct: 611 VTNYNSNTTSVIDTATNKVKATINVGEHP---WGVAVSPDGTKVYVTT----YYDVSVID 663

Query: 289 LQSNA------TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
             +N         R  + + +N + +        V+ +  +G    +V   +   +K I+
Sbjct: 664 TATNTVTAKVDVRRRPHEIVVNTAGT-------KVYVAGGDG----FVSVIDTVTRKVIT 712

Query: 343 QDKEASYFDP-VWSPQGDLIAFTKFSGEKFAI 373
           +       +    +P G  +         + I
Sbjct: 713 RVNVGKDTEGVAVTPNGKKVYVVTR--GSYEI 742


>gi|328860060|gb|EGG09167.1| hypothetical protein MELLADRAFT_34581 [Melampsora larici-populina
           98AG31]
          Length = 513

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 58/354 (16%), Positives = 107/354 (30%), Gaps = 78/354 (22%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           TGR +  G        RLWD+              P   R + HT        +   + D
Sbjct: 160 TGRFLATGSGDHT--CRLWDLSTE----------MPKD-RLVGHT------GWLLCIEWD 200

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSP-----NQQKV 226
              R++       +G + N++ + D   G  +        + +    + P        ++
Sbjct: 201 GCERLI------ATGSMDNTVRIWDPITGKPLGDALKGHSKWITSLAWEPIHLNAKTTRL 254

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A ++ D      V + + R  R    +G+  + +   R+S  G+  L +   D  +  + 
Sbjct: 255 ASSSKDG----TVRVWNPRSGRTDFTLGSHTASVNVVRWS--GEGILYTASSDRTVKCW- 307

Query: 287 VDLQSNATER-------LTNTLFINIS-----ASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D  +    R         NTL +N         +           D+  +  L   Q+ 
Sbjct: 308 -DGSNGKLIRTLNEHSHWVNTLALNTDYILRTGPFDHTGFNPSLTDDQSQQIALKRYQAF 366

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            S  + +       +   +WSP          + +K             RL      +  
Sbjct: 367 KSIHQELLISGSDDHTLFLWSP------MDSLTPKKPI----------ARLTGHQKQVNH 410

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP----QWVG 444
            ++SP G+ L        D   KL+     G+    I T      P     W  
Sbjct: 411 VSFSPDGKYLA---SAGFDNHVKLW----EGQTGKFITTLRGHVAPVYRLSWSC 457


>gi|261332047|emb|CBH15040.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 1747

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 78/188 (41%), Gaps = 23/188 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRS----MILAPRFSSNGKRAL 273
           +SPN +++A A  D+  ++ +Y     R D+ P +  + ++    +I    FS +  +  
Sbjct: 24  WSPNNKRLAVA--DNNRVVNLYDEHGERRDKFPTKAADGKNGKAFVIEGMAFSPDSSKIA 81

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQ----IVFESDREGKE 326
           I  Q D  + IY V ++    + +  + F   S       P++SQ    +VF    +GK 
Sbjct: 82  I-GQSDGIVAIYRVGIEWGEKKAI-CSKFPQNSPVTCLCWPETSQGVELVVF-GTLDGKV 138

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQE 383
           ++ ++++N S         E +      SP G+ +      G  +      +D   GS  
Sbjct: 139 KVGILKANKSQA---LYAHEHAVVSIASSPDGNKVISGHLDGAVYQYTFESEDAGGGSGS 195

Query: 384 RLLVEDSN 391
           + L    +
Sbjct: 196 KKLFNHGH 203


>gi|294891385|ref|XP_002773553.1| wd-repeat protein, putative [Perkinsus marinus ATCC 50983]
 gi|239878725|gb|EER05369.1| wd-repeat protein, putative [Perkinsus marinus ATCC 50983]
          Length = 539

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 80/252 (31%), Gaps = 35/252 (13%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +      L  +  DG                  +SPN +++A    D    +        
Sbjct: 250 ADEKMKRLYTLGSDG-------HGHSDRCQTVAWSPNGRQLASGGADHNICIWDLPTADV 302

Query: 246 IDRAPKRIGNFRSMILA------------PRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                + +    S +L             P F     + + S   D+   ++  D++   
Sbjct: 303 DTNIDEPLSLQPSAVLEGHEMRVNNVEYVPVFP----QLVASTSHDDTWRLW--DIEKQE 356

Query: 294 TERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA---SY 349
              L       +   +  P  S I   SD  G  +++ +++ G     ++ +        
Sbjct: 357 EILLQEGHNHPVFGLAIHPCGSLIA-TSDMSGVVRVWDLRT-GRTVLPLTYEDGGHCKGV 414

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               +SP G  +A T        +  ++K    E L   +  +    +SP GR L+ +  
Sbjct: 415 LAVDFSPNGFQLA-TGGMDNSVKLWDLRKRRRLENLPAHEKLISDVRFSPDGRLLLTAGY 473

Query: 410 KDGDTGSKLYSI 421
              D  +K++S 
Sbjct: 474 ---DGVAKIWST 482



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 65/169 (38%), Gaps = 25/169 (14%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RLWD++ +++I+ ++  + P  +    H     I  + +   G    R+  +        
Sbjct: 348 RLWDIEKQEEILLQEGHNHPV-FGLAIHPCGSLI--ATSDMSGV--VRVWDLR------T 396

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +  L +   DG + + +            FSPN  ++A    D+     V L D R  R
Sbjct: 397 GRTVLPLTYEDGGHCKGVLAVD--------FSPNGFQLATGGMDN----SVKLWDLRKRR 444

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             + +     +I   RFS +G R L++   D    I+S  L       L
Sbjct: 445 RLENLPAHEKLISDVRFSPDG-RLLLTAGYDGVAKIWST-LDWTDVRNL 491


>gi|71746640|ref|XP_822375.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|70832043|gb|EAN77547.1| hypothetical protein, conserved [Trypanosoma brucei]
          Length = 1747

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 78/188 (41%), Gaps = 23/188 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRS----MILAPRFSSNGKRAL 273
           +SPN +++A A  D+  ++ +Y     R D+ P +  + ++    +I    FS +  +  
Sbjct: 24  WSPNNKRLAVA--DNNRVVNLYDEHGERRDKFPTKAADGKNGKAFVIEGMAFSPDSSKIA 81

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQ----IVFESDREGKE 326
           I  Q D  + IY V ++    + +  + F   S       P++SQ    +VF    +GK 
Sbjct: 82  I-GQSDGIVAIYRVGIEWGEKKAI-CSKFPQNSPVTCLCWPETSQGVELVVF-GTLDGKV 138

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQE 383
           ++ ++++N S         E +      SP G+ +      G  +      +D   GS  
Sbjct: 139 KVGILKANKSQA---LYAHEHAVVSIASSPDGNKVISGHLDGAVYQYTFESEDAGGGSGS 195

Query: 384 RLLVEDSN 391
           + L    +
Sbjct: 196 KKLFNHGH 203


>gi|326426734|gb|EGD72304.1| hypothetical protein PTSG_00323 [Salpingoeca sp. ATCC 50818]
          Length = 405

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/218 (13%), Positives = 63/218 (28%), Gaps = 17/218 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +     + ++   FS   + +A  + D        + +T   +    +      +    
Sbjct: 144 TVLDGHSRTVWHIAFSSTGKLLASCSGDSTSK----IWNTETGQVVHTLVGHEGSVQYVA 199

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F+        +   D  + ++ V L       L           +SP S+ +      + 
Sbjct: 200 FNPT-DAVAATCSIDSTVKLWDV-LTGQCVNTLVGHDEWVSQIVFSPTSATMCATCSSDC 257

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             +L+     G    R+ +D EA      +SP G  +           I        Q +
Sbjct: 258 TVRLW----EGDSCWRVLEDHEADVNTVRFSPSGAALISCSDDST---INFYDLRLGQLK 310

Query: 385 -LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +     +    +SP G  +      D      L+ +
Sbjct: 311 YKMTGPHPMNDVVFSPDGSVIA---GVDEGGNLSLWDV 345



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 64/194 (32%), Gaps = 13/194 (6%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV-AYATYDDEDILRVYLMDTRI 246
            I +++ + D             D+ + +  FSP    + A  + D        +     
Sbjct: 211 SIDSTVKLWDVLTGQCVNTLVGHDEWVSQIVFSPTSATMCATCSSDC------TVRLWEG 264

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           D   + + +  + +   RFS +G  ALIS   D  ++ Y  DL+    +           
Sbjct: 265 DSCWRVLEDHEADVNTVRFSPSGA-ALISCSDDSTINFY--DLRLGQLKYKMTGPHPMND 321

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SPD S I    D  G   L+       +     Q  + S     + P G ++     
Sbjct: 322 VVFSPDGSVIA-GVDEGGNLSLW--DVASGELFASIQKHKVSATHVTFDPNGSMVCTADE 378

Query: 367 SGEKFAIGVMKKDG 380
            G      +   DG
Sbjct: 379 KGTVLVWYLAPVDG 392


>gi|296816711|ref|XP_002848692.1| dipeptidyl-peptidase 5 [Arthroderma otae CBS 113480]
 gi|259645319|sp|C5FH88|DPP5_NANOT RecName: Full=Dipeptidyl-peptidase 5; AltName:
           Full=Dipeptidyl-peptidase V; Short=DPP V; Short=DppV;
           Flags: Precursor
 gi|238839145|gb|EEQ28807.1| dipeptidyl-peptidase 5 [Arthroderma otae CBS 113480]
          Length = 726

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 73/203 (35%), Gaps = 29/203 (14%)

Query: 265 FSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTL----------FINISA 307
            S +GK      +  E          I++V    +      N              + S 
Sbjct: 232 LSPDGKTVAFMSKAPELPKANLTTSYIFTVPHDGSKVAEPINKRNGPRTPHGIEGASSSP 291

Query: 308 SYSPDSSQIVF----ESDREGKEQLYVMQSNGSD--QKRISQDKEASYFDPVWSPQGDLI 361
            +SPDS +I +      + E   ++  +   GS+   +RI+ + + S     WS  G  +
Sbjct: 292 VFSPDSKRIAYLQMATKNYESDRRVIHIAEVGSNKPAQRIASNWDRSPESIKWSSDGRTL 351

Query: 362 AFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             T     +G+ F +    +D      +  D ++ A ++  S +S++ +        + L
Sbjct: 352 YVTAEEHATGKLFTLPSDARDNHMPSAVKHDGSVSAFSFVGSSKSVLITGNS--LWSNAL 409

Query: 419 YSIDLNGRNETLINTPAYASDPQ 441
           Y I   GR    +   A   DPQ
Sbjct: 410 YQIATPGRPNRKLFY-ANEHDPQ 431



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 76/253 (30%), Gaps = 40/253 (15%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S  IY S+     D      F   +V SG +  +      DG     + P +      P 
Sbjct: 166 SARIYDSLFVRHWDAYVGTQF--NAVFSGALTKNGNKYSFDGKLKNLVQPVKYAESPYPP 223

Query: 219 F--------SPNQQKVAYAT---------------YDDEDILRVYLMDTRIDRAPKRIGN 255
           F        SP+ + VA+ +               +                  P+    
Sbjct: 224 FGGSGDYDLSPDGKTVAFMSKAPELPKANLTTSYIFTVPHDGSKVAEPINKRNGPRTPHG 283

Query: 256 FRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQ----SNATERLTNTLFINISAS- 308
                 +P FS + KR        K+   D   + +     +   +R+ +    + S   
Sbjct: 284 IEGASSSPVFSPDSKRIAYLQMATKNYESDRRVIHIAEVGSNKPAQRIASN--WDRSPES 341

Query: 309 --YSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAF 363
             +S D   +   ++     +L+ + S+  D      +  D   S F  V S +  LI  
Sbjct: 342 IKWSSDGRTLYVTAEEHATGKLFTLPSDARDNHMPSAVKHDGSVSAFSFVGSSKSVLITG 401

Query: 364 TK-FSGEKFAIGV 375
              +S   + I  
Sbjct: 402 NSLWSNALYQIAT 414



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/125 (13%), Positives = 36/125 (28%), Gaps = 24/125 (19%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVE------- 388
                   D   SP G  +AF   + E          I  +  DGS+    +        
Sbjct: 221 YPPFGGSGDYDLSPDGKTVAFMSKAPELPKANLTTSYIFTVPHDGSKVAEPINKRNGPRT 280

Query: 389 ----DSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDP- 440
               +    +P +SP  + + + +    +  S    ++  ++            +   P 
Sbjct: 281 PHGIEGASSSPVFSPDSKRIAYLQMATKNYESDRRVIHIAEVGSNKPAQRIASNWDRSPE 340

Query: 441 --QWV 443
             +W 
Sbjct: 341 SIKWS 345


>gi|223646780|gb|ACN10148.1| Guanine nucleotide-binding protein subunit beta-2-like 1 [Salmo
           salar]
 gi|223672635|gb|ACN12499.1| Guanine nucleotide-binding protein subunit beta-2-like 1 [Salmo
           salar]
          Length = 317

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/215 (16%), Positives = 71/215 (33%), Gaps = 19/215 (8%)

Query: 193 LCVMDRDGAN---IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  + RD  N    +         + +   S + Q     ++D      + L D      
Sbjct: 42  MWKLTRDETNYGIPQRALKGHSHFVSDVVISSDGQFALSGSWDG----TLRLWDLTTGTT 97

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT----NTLFINI 305
            +R       +L+  FS++ ++ + S  +D+ + ++     +    + T    +      
Sbjct: 98  TRRFVGHTKDVLSVAFSADNRQIV-SGSRDKTIKLW----NTLGVCKYTIQDESHSEWVS 152

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              +SP+SS  +  S     + + V        K               SP G L AF  
Sbjct: 153 CVRFSPNSSNPIIVSC-GWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCAFGG 211

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
             G+     +   +G     L    N+ A  +SP+
Sbjct: 212 KDGQAMLWDL--NEGKHLYTLDSGDNINALCFSPN 244


>gi|198276907|ref|ZP_03209438.1| hypothetical protein BACPLE_03112 [Bacteroides plebeius DSM 17135]
 gi|198270432|gb|EDY94702.1| hypothetical protein BACPLE_03112 [Bacteroides plebeius DSM 17135]
          Length = 732

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 63/179 (35%), Gaps = 33/179 (18%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---- 274
            S + +++   ++     +   + D    R   ++ +F   I+    S +    LI    
Sbjct: 52  ISKDHKRIVKYSFKTGKEV-ATIFDVATARN-HKLKSFDDYIM----SPDESLILIQTET 105

Query: 275 --SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               ++      Y  ++++   E L+N         +SPDS QI F  +        +  
Sbjct: 106 KPIYRRSFTAVYYIYNVRNRTLEPLSNN-GPQQVPLFSPDSHQIAFVRN---NNIYLIKL 161

Query: 333 SNGSDQKRISQDKEAS---YFDPVW--------------SPQGDLIAFTKFSGEKFAIG 374
             G+ + ++++D E +      P W              S    +IA+ +F   +  + 
Sbjct: 162 LFGNSESQVTKDGEYNKVLNGIPDWVYEEEFSYNRAFDFSADSKMIAYVRFDESQVPMY 220



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 53/167 (31%), Gaps = 32/167 (19%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS----PDSSQIVFESD 321
           S + KR +    K         D+ +    +L +     +S   S       ++ ++   
Sbjct: 53  SKDHKRIVKYSFKTGKEVATIFDVATARNHKLKSFDDYIMSPDESLILIQTETKPIYR-- 110

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-G 380
           R      Y+        + +S +       P++SP    IAF + +     I ++K   G
Sbjct: 111 RSFTAVYYIYNVRNRTLEPLSNNGPQQV--PLFSPDSHQIAFVRNN----NIYLIKLLFG 164

Query: 381 SQERLLVEDS-----NLQAPTW--------------SPSGRSLIFSR 408
           + E  + +D          P W              S   + + + R
Sbjct: 165 NSESQVTKDGEYNKVLNGIPDWVYEEEFSYNRAFDFSADSKMIAYVR 211



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 63/189 (33%), Gaps = 10/189 (5%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y     + G  NS++   S  + S + +     +D DG   R       + L     + +
Sbjct: 242 YDYKYPKAGVVNSKVSVHSFDIKSRVTRKMELPVDSDGYVPRIKFTDDPEKLAIMTLNRH 301

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           Q +      +    +    +    ++  K    +  +   P      +  ++  ++D   
Sbjct: 302 QNRFDLYMANPRSAICKVAIRDEAEQYIKEQA-YSDITFYP------EHIVMMSERDGYN 354

Query: 283 DIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQK 339
            +Y   +  N  +++T   F +     +   ++   + S+     +  +Y +   G   K
Sbjct: 355 HLYLYTIGGNLVKQITKGEFEVKDFLGWDQKANVFYYTSNEGSPLRTAVYKIDGKGKKTK 414

Query: 340 RISQDKEAS 348
             ++    +
Sbjct: 415 LSTRTGTNN 423



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 1/87 (1%)

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            IV  S+R+G   LY+    G+  K+I++ +        W  + ++  +T   G      
Sbjct: 343 HIVMMSERDGYNHLYLYTIGGNLVKQITKGEFEVKDFLGWDQKANVFYYTSNEGSPLRTA 402

Query: 375 VMKKDG-SQERLLVEDSNLQAPTWSPS 400
           V K DG  ++  L   +      +S +
Sbjct: 403 VYKIDGKGKKTKLSTRTGTNNALFSKN 429



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 30/228 (13%), Positives = 76/228 (33%), Gaps = 24/228 (10%)

Query: 219 FSPNQQKVAYATYDDED-ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           FS + + +AY  +D+    +  +     +         +         S + K    +  
Sbjct: 200 FSADSKMIAYVRFDESQVPMYSFPWYKGMAPEKTEYTTYPG-------SYDYKYPK-AGV 251

Query: 278 KDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIV-FESDR-EGKEQLYVMQ 332
            +  + ++S D++S  T ++    ++        ++ D  ++     +R + +  LY+  
Sbjct: 252 VNSKVSVHSFDIKSRVTRKMELPVDSDGYVPRIKFTDDPEKLAIMTLNRHQNRFDLYMAN 311

Query: 333 SNGSDQKRISQD------KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
              +  K   +D      KE +Y D  + P  + I           + +    G+  + +
Sbjct: 312 PRSAICKVAIRDEAEQYIKEQAYSDITFYP--EHIVMMSERDGYNHLYLYTIGGNLVKQI 369

Query: 387 VEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +          W        ++  +     + +Y ID  G+   L  
Sbjct: 370 TKGEFEVKDFLGWDQKANVFYYTSNEGSPLRTAVYKIDGKGKKTKLST 417


>gi|195446886|ref|XP_002070967.1| GK25539 [Drosophila willistoni]
 gi|194167052|gb|EDW81953.1| GK25539 [Drosophila willistoni]
          Length = 311

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 59/151 (39%), Gaps = 11/151 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    S+ + D        + P  D  + +   SP+   +A    +++    ++ + +  
Sbjct: 138 GSQNGSVYLWDVKSEKHERIVPEVDASIQDVAISPDGHYLA--AGNNKGNCYIWSLTSSP 195

Query: 247 DR------APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           D+        K+I      IL  +FS +  R L++   D    I+  +        L+  
Sbjct: 196 DQKMSTLCPKKKISAHSRYILRCKFSPD-SRLLLTTSGDGTACIWKTE-DFTKWRELSIE 253

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +    A++S DS  + F +  +G  +L+ +
Sbjct: 254 NYWVWDAAFSADSKWL-FTASSDGVARLWKL 283



 Score = 41.9 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 54/148 (36%), Gaps = 12/148 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---- 293
            VYL D + ++  + +    + I     S +G     +        I+S+    +     
Sbjct: 143 SVYLWDVKSEKHERIVPEVDASIQDVAISPDGHYLA-AGNNKGNCYIWSLTSSPDQKMST 201

Query: 294 ---TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
               ++++      +   +SPDS  ++  S  +G   ++  + + +  + +S +    + 
Sbjct: 202 LCPKKKISAHSRYILRCKFSPDSRLLLTTSG-DGTACIWKTE-DFTKWRELSIENYWVW- 258

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           D  +S     + FT  S     +  +  
Sbjct: 259 DAAFSADSKWL-FTASSDGVARLWKLHT 285



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 34/231 (14%), Positives = 77/231 (33%), Gaps = 17/231 (7%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P++ ++A   Y     +R+Y +++          + +  +    F  +G     +  +D 
Sbjct: 44  PDKTRLAACGY---QCIRLYDLESNCTAPVINFESVQKNVTRLGFQEDGNWM-FTAGEDH 99

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ +        R+ +      +A   P+  +I   S       +Y+        +R
Sbjct: 100 RVRIWDMTAAPPQCSRVFDCQAPVNAACLHPNQVEIGMGSQ---NGSVYLWDVKSEKHER 156

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-------VEDSNLQ 393
           I  + +AS  D   SP G  +A     G  +   +      +   L            + 
Sbjct: 157 IVPEVDASIQDVAISPDGHYLAAGNNKGNCYIWSLTSSPDQKMSTLCPKKKISAHSRYIL 216

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              +SP  R L+ +    GD  + ++  +   +   L     +  D  +  
Sbjct: 217 RCKFSPDSRLLLTTS---GDGTACIWKTEDFTKWRELSIENYWVWDAAFSA 264


>gi|171679431|ref|XP_001904662.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939341|emb|CAP64569.1| unnamed protein product [Podospora anserina S mat+]
          Length = 697

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 66/183 (36%), Gaps = 17/183 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +S  S   + ++ ++  +G+    +T  ++  + +  +SPN ++             +
Sbjct: 243 VDKSNKSYYGETNMYLLSANGSFDARITLDKEGPIHDVSWSPNSKEFGVVYGYMPAKTTI 302

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  L PR    FS  G+ AL++   + A  I   DL+ +  +
Sbjct: 303 FNH---------RAVPTHSFPLGPRNTIIFSPTGRFALVAGFGNLAGQIDVYDLEKDNRK 353

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             T          +SPDS  I     S R   +    +   G     +  +     ++ +
Sbjct: 354 VTTIESGNPSVCQWSPDSRYIMTATTSPRLRVDNGVKLWHVGGGI--VYNEDFNELYNVM 411

Query: 354 WSP 356
           W P
Sbjct: 412 WRP 414



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/211 (14%), Positives = 69/211 (32%), Gaps = 21/211 (9%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKD------ 279
            +          V + +     +P  +   F+   +  ++++ G   ++  Q +      
Sbjct: 189 VFIPERKGQPAAVKVYNVPQFSSPISQKTFFKGDKVQLKWNALGTNLIVLAQTEVDKSNK 248

Query: 280 ---EAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSN 334
                 ++Y +    +   R+T +        S+SP+S +  V       K  ++  ++ 
Sbjct: 249 SYYGETNMYLLSANGSFDARITLDKEGPIHDVSWSPNSKEFGVVYGYMPAKTTIFNHRAV 308

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQ 393
            +    +           ++SP G       F      I V   +    ++   E  N  
Sbjct: 309 PTHSFPL-----GPRNTIIFSPTGRFALVAGFGNLAGQIDVYDLEKDNRKVTTIESGNPS 363

Query: 394 APTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
              WSP  R ++ +        D G KL+ +
Sbjct: 364 VCQWSPDSRYIMTATTSPRLRVDNGVKLWHV 394


>gi|158335655|ref|YP_001516827.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158305896|gb|ABW27513.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 1181

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/265 (13%), Positives = 89/265 (33%), Gaps = 60/265 (22%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-- 277
            SP  QK+   T  ++  +R++       R    +     ++ +  FS +G+  L + +  
Sbjct: 805  SPIGQKL--VTLGEDSTIRIWDF---AGRKLAELKGHSGLVSSASFSPDGQSLLTTGRDG 859

Query: 278  ------------------------------------KDEAMDIYSVDLQSNATERLTNTL 301
                                                KD  + ++  D      ++  +  
Sbjct: 860  SLHLWNLAGQRQWAGQHKSIWSIALHPQQDTVATTGKDGMLRLWQKDGTLLWEKQ-AHNK 918

Query: 302  FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              ++   +SPD  Q+   +  +G  +++ +Q    +   + ++   S     + P+G+++
Sbjct: 919  GNDV--VFSPDQKQLA-TAGEDGYVRMWNLQGRKLEDHLVDKEGVYSL---SYGPKGEML 972

Query: 362  AFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A     G    + +        +        L A  +SP G+ L+       +   K+++
Sbjct: 973  AAAANDGT---VHLWDFQTKDHQQFEASTQPLWAIRFSPDGKQLV---TAGKEGQIKVWT 1026

Query: 421  IDLNGRNETLIN-TPAYASDPQWVG 444
                G+     +    + SD ++  
Sbjct: 1027 PS--GKKLRQFDAQQGWLSDVRYTP 1049



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 50/326 (15%), Positives = 100/326 (30%), Gaps = 76/326 (23%)

Query: 160 DDIYQSIT--GEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           D+IY++ T  G KG   S          ++      + +    G  ++    + + I F 
Sbjct: 565 DNIYETNTWQGHKGRIYSGSFSPKGEQLITAGKDGYVRIWSLTGEQLQEFQANPEGIRFA 624

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             F  N Q +                      A ++IG  RS+    RFS N  +   + 
Sbjct: 625 -AFLKNGQVLTLTPMGQLQFWDA--EGDLQSTASQKIGKLRSI----RFSPNRDQFA-TA 676

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV------ 330
             D  + ++  +       + T       S S++PD   ++     +G  Q +       
Sbjct: 677 STDGQVYLW--NQTGQLLAQFTANNGSVSSLSFNPDGQTVI-TVGADGTMQAWTLSGQKL 733

Query: 331 -----------------------------------------------MQSNGSDQKRISQ 343
                                                            ++ +    + +
Sbjct: 734 REWKSRINPNLKLNSVSFLPDTVPGTASSSQQNQRFAMVGTDGLIRLWSASSTQPLNVWR 793

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGR 402
             + S +    SP G  +      GE   I +    G +   L      + + ++SP G+
Sbjct: 794 GSQTSLYLIDASPIGQKLV---TLGEDSTIRIWDFAGRKLAELKGHSGLVSSASFSPDGQ 850

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNE 428
           SL+ +  +DG     L+  +L G+ +
Sbjct: 851 SLL-TTGRDG----SLHLWNLAGQRQ 871



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 75/186 (40%), Gaps = 16/186 (8%)

Query: 204  RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
                 +  Q L+  RFSP+ +++   T   E  ++V+   T   +  ++    +  +   
Sbjct: 991  HQQFEASTQPLWAIRFSPDGKQL--VTAGKEGQIKVW---TPSGKKLRQFDAQQGWLSDV 1045

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            R++ +G++ + +V KD ++  +S   Q     +  +     +    S D  ++       
Sbjct: 1046 RYTPDGQQMV-TVGKDGSVKFWSTKGQLQQEFQ--SHPNDILRLVLSADGQRLA----TS 1098

Query: 324  GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            G++ +  + ++   Q       + + +   ++  G  +      G+  AI + +  G+  
Sbjct: 1099 GQDGIVKIWTSKGQQLAELMGHQGAVYSLQFAADGQSLMTV---GKDDAIRIWQT-GTLP 1154

Query: 384  RLLVED 389
            +LL + 
Sbjct: 1155 QLLQQG 1160


>gi|116671043|ref|YP_831976.1| hypothetical protein Arth_2497 [Arthrobacter sp. FB24]
 gi|116611152|gb|ABK03876.1| conserved hypothetical protein [Arthrobacter sp. FB24]
          Length = 328

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/207 (11%), Positives = 66/207 (31%), Gaps = 23/207 (11%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            ++ +    ++ +     S  +        +   DG+ +         ++   + +   +
Sbjct: 126 RMSADGSLVSTTVFVTGHSYGASGFSTETSISRTDGSPVTGTLEGFALLVNGAQVTAADR 185

Query: 225 KVAYATYDDEDILRVY--------LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            +   T+   +    Y        +   +   + + +      +  P  S +G R     
Sbjct: 186 NIWGVTFVPGEADAFYATAASSGRIWLVKGSISARTLTAIHDGVECPSLSPDGTRVAYKK 245

Query: 277 QKDE----AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ---LY 329
                      I  +DL       L+ T  ++    +  D + +++   R+G E    ++
Sbjct: 246 NTGTPLAAHWKIAILDLAGGKETVLSETRSVDDQIEWLDDGT-LLYGLPRDGAEGDSDIW 304

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSP 356
            + ++ S Q  +       Y +  WSP
Sbjct: 305 QITADPSAQASL-------YIEHAWSP 324



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 65/197 (32%), Gaps = 24/197 (12%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN---ATERLTNTL----FIN 304
            + NF +++L   +    + A+             +    +    T  +T         +
Sbjct: 97  LVTNFEAVLLNREWQPTSRWAV-----PGMPSRTRMSADGSLVSTTVFVTGHSYGASGFS 151

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              S S      V      G  + + +  NG+      ++     F P     G+  AF 
Sbjct: 152 TETSISRTDGSPV-----TGTLEGFALLVNGAQVTAADRNIWGVTFVP-----GEADAFY 201

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS--KLYSID 422
             +     I ++K   S   L      ++ P+ SP G  + + +       +  K+  +D
Sbjct: 202 ATAASSGRIWLVKGSISARTLTAIHDGVECPSLSPDGTRVAYKKNTGTPLAAHWKIAILD 261

Query: 423 LNGRNETLINTPAYASD 439
           L G  ET+++      D
Sbjct: 262 LAGGKETVLSETRSVDD 278


>gi|74189962|dbj|BAE24602.1| unnamed protein product [Mus musculus]
          Length = 485

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 158

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGS-DQKRISQDKEASYFDPVW-----S 355
            +S S+SPD  ++       G    Q+ +   +      R             W     +
Sbjct: 159 VLSISWSPDGKKLA-----SGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMN 213

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + V     G  ER+L     ++    W   G  L++S  +D
Sbjct: 214 PECRYVASSSKDGS---VRVWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 266



 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASF---DKSI 396

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLATDLPGH 455

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 456 ADEVYAVDWSPDGQRVA 472



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 131 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA---SGCKNGQVLLWDPST 187

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ ++           LT  
Sbjct: 188 GLQVGRTLTGHSKWITGLSWEPLHMNPECRYVA-SSSKDGSVRVWDT-TAGRCERILTGH 245

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 246 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 45/113 (39%), Gaps = 7/113 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++LF  +S +         +   DG   +YL         +++  +S + + +   + D 
Sbjct: 377 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 436

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                + + D +  +    +      + A  +S +G+R   S +KD+ + I+ 
Sbjct: 437 ----TLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVA-SGRKDKCLRIWR 484


>gi|317419065|emb|CBN81103.1| WD repeat-containing protein 1 [Dicentrarchus labrax]
          Length = 612

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 93/282 (32%), Gaps = 43/282 (15%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   V++V+  D + ++      +    + I NP     + +     A  +   
Sbjct: 9   FASLPQMERGVAKVIGGDPKGNNFLYTNGKCVIIRNIENPAIADIYTE----HAHQVTVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           +    G          + R+WD   ++ ++  ++       + IA T        +   +
Sbjct: 65  KYAPSGFYIASGDASGKIRIWDTTQKEHLLKYEYTPISGKVKDIAWTEDSKRIAVVGDGR 124

Query: 171 GDFNSRILFVSESVVS---------------GIIKNSLCVMDRDG---------ANIRYL 206
             F +  L+ S S V                      L     D             ++ 
Sbjct: 125 EKFGAVFLWDSGSSVGEVSGHSKLINSVDIRQKRPYRLATASDDTCGSFFEGPPFKFKFT 184

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN---FRSMILAP 263
                Q +   RFSP+  + A A+ D     ++++ D         +G     +  I A 
Sbjct: 185 LRDHSQFVNCVRFSPDGGRFATASADG----QIFIYDGATGERVSSLGGEKAHKGGIYAV 240

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +S +  +  IS   D+ + ++ V   +  T   T  +  ++
Sbjct: 241 SWSPDSSQL-ISASGDKTVKLWDVGAGTAVT---TFNMGTDV 278



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 37/259 (14%), Positives = 69/259 (26%), Gaps = 56/259 (21%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   +++P+   +A  + D    +R++    +              +    +
Sbjct: 53  IYTEHAHQVTVAKYAPSGFYIA--SGDASGKIRIWDTTQKEHLLKYEYTPISGKVKDIAW 110

Query: 266 SSNGKRALISVQK--------------------DEAMDIYSVDLQSNATERLTNTLFINI 305
           + + KR  +                          +  I SVD++     RL  T   + 
Sbjct: 111 TEDSKRIAVVGDGREKFGAVFLWDSGSSVGEVSGHSKLINSVDIRQKRPYRL-ATASDDT 169

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             S+             EG    +             +D         +SP G   A   
Sbjct: 170 CGSFF------------EGPPFKFKFTL---------RDHSQFVNCVRFSPDGGRFATAS 208

Query: 366 FSGEKFAIGVMKKDGSQER-----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G    I +      +              + A +WSP    LI      GD   KL+ 
Sbjct: 209 ADG---QIFIYDGATGERVSSLGGEKAHKGGIYAVSWSPDSSQLI---SASGDKTVKLWD 262

Query: 421 IDLNGRNETLINTPAYASD 439
           +   G   T  N     +D
Sbjct: 263 V-GAGTAVTTFNMGTDVTD 280


>gi|299755778|ref|XP_001828881.2| WD40 repeat-containing protein [Coprinopsis cinerea okayama7#130]
 gi|298411378|gb|EAU92888.2| WD40 repeat-containing protein [Coprinopsis cinerea okayama7#130]
          Length = 325

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 87/254 (34%), Gaps = 25/254 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D +  +I +      + + +  ++P+ + +A A+ D      V +    
Sbjct: 52  SAGPDKTIKLWDTESGDIIHTFRGHKEGINDLAWAPDGEFIASASDDK----TVIIWSLE 107

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           +    K +    S++    ++ N    L+S   DE + I+ V  +  A + L        
Sbjct: 108 LREPVKTLSRHTSVVFCINYNPN-SNLLVSGGYDETVIIWDV-ARGKALKTLPAHSDPVT 165

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFT 364
           +  ++ D + I+  +  +G   + +  +      K +  D         +SP      F 
Sbjct: 166 AVGFNDDGTLIISCA-MDG--LIRLWDAESGQCLKTLVDDDNPICSHVCFSPNSK---FA 219

Query: 365 KFSGEKFAIGVMKKDGSQERLLVED---SNLQAPT-W---SPSGRSLIFSRKKDGDTGSK 417
             S +   I +     S+               P  +   S  G+ ++      G    K
Sbjct: 220 LASTQDSTIRLWNIQSSRCVKTYTGHVNRTYCIPACFATKSSKGQYIV-----TGSEDGK 274

Query: 418 LYSIDLNGRNETLI 431
           +Y  DL  R    +
Sbjct: 275 IYVWDLQSRQVLQV 288


>gi|297263964|ref|XP_001112752.2| PREDICTED: aladin-like, partial [Macaca mulatta]
          Length = 191

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 4/103 (3%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S +++P   +++  S  +    + V   +      +   +     + +WSP G  I  T
Sbjct: 18  TSLAWAPSGGRLLSASPVD--AAIRVWDVSTETCVPLPWFRGGGVTNLLWSPDGSKILAT 75

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
             S   F +   +     ER        Q   WSP G  L+F+
Sbjct: 76  TPS-AVFRVWEAQMWT-CERWPTLSGRCQTGCWSPDGNRLLFT 116



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 68/199 (34%), Gaps = 29/199 (14%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + L+      +    ++P+  ++  A+        + + D   +            +  
Sbjct: 6   AQVLSHPGHTPVTSLAWAPSGGRLLSAS---PVDAAIRVWDVSTETCVPLPWFRGGGVTN 62

Query: 263 PRFSSNGKRALIS----VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +S +G + L +    V +     +++        ER         +  +SPD ++++F
Sbjct: 63  LLWSPDGSKILATTPSAVFRVWEAQMWTC-------ERWPTLSGRCQTGCWSPDGNRLLF 115

Query: 319 ESDREGKEQLYVMQSN---GSDQKRISQDKEASYFDPVW-----SPQGDLIAFTKFSGEK 370
                G+  +Y +      G  + R+   K A+    +      +P G+     +  G +
Sbjct: 116 TV--LGEPLIYSLSFPEQCGEGKGRVGGAKSATIVADLSETTIQTPDGE-----ERLGGE 168

Query: 371 FAIGVMKKDGSQERLLVED 389
               V    G +  +L++ 
Sbjct: 169 AHSMVWDPSGERLAVLMKG 187


>gi|302510913|ref|XP_003017408.1| vegetative incompatibility WD repeat protein, putative [Arthroderma
           benhamiae CBS 112371]
 gi|291180979|gb|EFE36763.1| vegetative incompatibility WD repeat protein, putative [Arthroderma
           benhamiae CBS 112371]
          Length = 569

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 70/223 (31%), Gaps = 26/223 (11%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +    + DI RV  +D   +          S++   RFS++GK                 
Sbjct: 215 WYAVFNPDIPRVLDVDLVHNLI------HDSVVCCVRFSADGKHVA----TGCNRSAQIF 264

Query: 288 DLQSNATERLTNTLFIN-------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           ++ +           ++        S  +SPD   +   ++    +Q+ V        K 
Sbjct: 265 EVSTGLLVSTLQDDSVDKDGDLYIRSVCFSPDGRYLATGAE---DKQIRVWDIASRTIKN 321

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           I    E   +   ++  G  IA            ++  DG QE +L  +  +     SP 
Sbjct: 322 IFSGHEQDIYSLDFARNGRYIASGSGDKTVRLWDIV--DGKQELILSIEDGVTTVAISPD 379

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           GR +        D   +++     G     + +P    D  + 
Sbjct: 380 GRYVAAGSL---DKSVRVWDT-TTGYLVERLESPDGHRDSVYS 418



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 56/159 (35%), Gaps = 9/159 (5%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    D  +    FSP+ + +A    D     ++ + D                I +  
Sbjct: 279 SVDKDGDLYIRSVCFSPDGRYLATGAEDK----QIRVWDIASRTIKNIFSGHEQDIYSLD 334

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F+ NG+    S   D+ + ++ + +       L+    +  + + SPD   +   S  + 
Sbjct: 335 FARNGRYIA-SGSGDKTVRLWDI-VDGKQELILSIEDGV-TTVAISPDGRYVAAGSL-DK 390

Query: 325 KEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIA 362
             +++   +    ++  S D    S +   ++P G  + 
Sbjct: 391 SVRVWDTTTGYLVERLESPDGHRDSVYSVAFAPNGRDLV 429


>gi|187778647|ref|ZP_02995120.1| hypothetical protein CLOSPO_02242 [Clostridium sporogenes ATCC
           15579]
 gi|187772272|gb|EDU36074.1| hypothetical protein CLOSPO_02242 [Clostridium sporogenes ATCC
           15579]
          Length = 429

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 81/221 (36%), Gaps = 28/221 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  +  Y   D      +  ++       K   +F S I       NG+       +   
Sbjct: 111 SGNEKIYTYMDYNPHGEIRKVNLDGSLNIKLCDDFASNIW-----INGQWLYYINHRGGN 165

Query: 282 MD--IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQLYVMQSN 334
            +  +Y +    ++ ERLT+T     S  +S +    +F      S  +   ++Y ++ +
Sbjct: 166 EENCLYRIKKDGSSRERLTDTTVY--SLVFSDN---YIFYSQYISSSSKDNYKIYRIKKD 220

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           GS++  +S  +  +         G  + +       ++I  ++ DG   + +   S+   
Sbjct: 221 GSNKIALSNVRGTNLIIQ-----GPFLYYLNIED-NYSIYRIRVDGLDMKKINNYSSRNF 274

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                 G  + +    + + G+ LY I L+G  E  +N  +
Sbjct: 275 MKI-KDG-WIYYI---NEELGNNLYRITLDGNYEEKLNDDS 310


>gi|238624156|ref|NP_663406.2| notchless protein homolog 1 [Mus musculus]
 gi|56205885|emb|CAI25495.1| notchless homolog 1 (Drosophila) [Mus musculus]
          Length = 485

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 158

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGS-DQKRISQDKEASYFDPVW-----S 355
            +S S+SPD  ++       G    Q+ +   +      R             W     +
Sbjct: 159 VLSISWSPDGKKLA-----SGCKNGQVLLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMN 213

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + V     G  ER+L     ++    W   G  L++S  +D
Sbjct: 214 PECRYVASSSKDGS---VRVWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 266



 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASF---DKSI 396

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLATDLPGH 455

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 456 ADEVYAVDWSPDGQRVA 472



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 131 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA---SGCKNGQVLLWDPST 187

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ ++           LT  
Sbjct: 188 GLQVGRTLTGHSKWITGLSWEPLHMNPECRYVA-SSSKDGSVRVWDT-TAGRCERILTGH 245

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 246 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298



 Score = 37.7 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 37/100 (37%), Gaps = 6/100 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++LF  +S +         +   DG   +YL         +++  +S + + +   + D 
Sbjct: 377 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 436

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                + + D +  +    +      + A  +S +G+R  
Sbjct: 437 ----TLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVA 472


>gi|229496034|ref|ZP_04389758.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
 gi|229317126|gb|EEN83035.1| conserved hypothetical protein [Porphyromonas endodontalis ATCC
           35406]
          Length = 840

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 19/137 (13%)

Query: 310 SPDSSQ--IVFESDREGKEQLY--VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           SP      +++ S RE K + +  +M ++G   + I + KE  Y +  W PQ D + F +
Sbjct: 215 SPSGKYALVIYYSQRERKTEYFGRLMHADG---RLIRESKELVYAN--WLPQSDQLHFVR 269

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             G K  + V   +G+ E++L+ D       +SP  +++  +++  GD   +        
Sbjct: 270 TEGSKRLLVVQSPEGASEKILLRDLPQGEYRFSPDAKTIYLAKEIKGDAKDE-------- 321

Query: 426 RNETLINTPAYASDPQW 442
                +  P     P W
Sbjct: 322 -KVIRMRDP-NDRMPSW 336


>gi|126173030|ref|YP_001049179.1| peptidase S9B dipeptidylpeptidase IV subunit [Shewanella baltica
           OS155]
 gi|125996235|gb|ABN60310.1| dipeptidyl-peptidase IV. Serine peptidase. MEROPS family S09B
           [Shewanella baltica OS155]
          Length = 771

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 71/255 (27%), Gaps = 64/255 (25%)

Query: 210 RDQILFEPRFSPNQQK----VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           ++++ + P  S   +     +A         +             K       M  +P  
Sbjct: 3   KNRLTWFPACSLKVRAVPLLIASQMAMISTAMISTTTPALAMEGGKLPLTIERMNASPAL 62

Query: 266 ----------SSNGKRALISVQKDEA---MDIYSVDLQSNATERL-------TNTLFINI 305
                     S +G R      + +     D++ +D++S  +  L       TN L    
Sbjct: 63  AGTSPRGLKLSPDGLRVTYLAGRKDNQSFYDLWQMDVKSGESSLLLNADKLATNELSDEE 122

Query: 306 SAS--------------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            A               +  D SQ +          LY      +   ++    E    D
Sbjct: 123 KARRERQRIYGEGIMEYFWADDSQALLI---PASGNLYYFSLTDNSVTQL-PIGEGFATD 178

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQ 393
              SP+G  ++F +       + V+     + + +  D                    + 
Sbjct: 179 ARLSPKGHFVSFVRDQ----NLYVLDLATKKLQAMTTDGGGAIKNAMAEFVAQEEMDRMT 234

Query: 394 APTWSPSGRSLIFSR 408
              W+P   ++ F+R
Sbjct: 235 GYWWAPDESAIAFTR 249



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 67/162 (41%), Gaps = 13/162 (8%)

Query: 207 TPSRDQILFEPR--FSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRS----- 258
           +  + + ++ PR  + P+ + +++     D+  L + L+       PK +   RS     
Sbjct: 307 SKDKSKDIYLPRVDWLPDSKYLSFQWQSRDQHQLDLQLVALDALTKPKTLVKERSDAWVN 366

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +     F       + + ++D    +Y  DL+     +LT   +      Y  +++  V+
Sbjct: 367 LNNDLHFLKQQSAFIWASERDGFNHLYLFDLKGKLKTKLTQGEWAVDELEYIDETAGWVY 426

Query: 319 ESDREGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + R+      QLY +   G   +R+S  K+A   +PV++  
Sbjct: 427 FTGRKDTPIEKQLYRVPLAGGKVERVS--KQAGMHNPVFADN 466



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 44/306 (14%), Positives = 92/306 (30%), Gaps = 70/306 (22%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +  DG  + YL   +D   F   +  + +    +   + D L    +        +R   
Sbjct: 72  LSPDGLRVTYLAGRKDNQSFYDLWQMDVKSGESSLLLNADKLATNELSDEEKARRERQRI 131

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           +   I+   ++ + +  LI    +    +Y   L  N+  +L         A  SP    
Sbjct: 132 YGEGIMEYFWADDSQALLIPASGN----LYYFSLTDNSVTQLPIGEGFATDARLSPKGHF 187

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQGD 359
           + F  D    + LYV+       + ++ D   +  + +                W+P   
Sbjct: 188 VSFVRD----QNLYVLDLATKKLQAMTTDGGGAIKNAMAEFVAQEEMDRMTGYWWAPDES 243

Query: 360 LIAFTKFSG------EKFAIGVMKKDGSQER---------------LLVEDSNLQAPT-- 396
            IAFT+          +  I       +++R               + ++D  +   +  
Sbjct: 244 AIAFTRIDESAVEQVTRNEIYADGIKLTEQRYPAAGKNNVDIALGVVTLKDKAINWVSLR 303

Query: 397 -----------------WSPSGRSLIF--SRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                            W P  + L F    +       +L ++D   + +TL+      
Sbjct: 304 EENSKDKSKDIYLPRVDWLPDSKYLSFQWQSRDQHQLDLQLVALDALTKPKTLVK----E 359

Query: 438 SDPQWV 443
               WV
Sbjct: 360 RSDAWV 365



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 41/294 (13%), Positives = 92/294 (31%), Gaps = 61/294 (20%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI------RYLTPSRDQILFEPRFSP 221
             KG F S +   +  V+    K  L  M  DG          ++       +    ++P
Sbjct: 182 SPKGHFVSFVRDQNLYVLDLATKK-LQAMTTDGGGAIKNAMAEFVAQEEMDRMTGYWWAP 240

Query: 222 NQQKVAYATYDDEDILR-----VYLMDTRIDRAPKRIGNFRSMILA-------------- 262
           ++  +A+   D+  + +     +Y    ++           ++ +A              
Sbjct: 241 DESAIAFTRIDESAVEQVTRNEIYADGIKLTEQRYPAAGKNNVDIALGVVTLKDKAINWV 300

Query: 263 ----------------PR--FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--- 301
                           PR  +  + K      Q   + D + +DLQ  A + LT      
Sbjct: 301 SLREENSKDKSKDIYLPRVDWLPDSKYLSFQWQ---SRDQHQLDLQLVALDALTKPKTLV 357

Query: 302 --------FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                    +N    +    S  ++ S+R+G   LY+    G  + +++Q + A      
Sbjct: 358 KERSDAWVNLNNDLHFLKQQSAFIWASERDGFNHLYLFDLKGKLKTKLTQGEWAVDELEY 417

Query: 354 WSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  + FT          +  +   G +   + + + +  P ++   +S+ 
Sbjct: 418 IDETAGWVYFTGRKDTPIEKQLYRVPLAGGKVERVSKQAGMHNPVFA-DNQSVY 470


>gi|321263470|ref|XP_003196453.1| transcription factor [Cryptococcus gattii WM276]
 gi|317462929|gb|ADV24666.1| transcription factor, putative [Cryptococcus gattii WM276]
          Length = 552

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 80/245 (32%), Gaps = 41/245 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +     +++      P+  ++A  ++D +  +     MD R+        N    +    
Sbjct: 109 ILKDHTKVVSALAVDPSGARIATGSHDYDTKLWDFGGMDHRLKPFKSFEANGNYYVHDLS 168

Query: 265 FSSNGKRALI--------SVQKDEAM-------DIYSVDLQSNATERLTNTLFINISA-S 308
           +S +G++ L+           ++          D+Y  D+++      TN     I+A +
Sbjct: 169 YSPDGQQLLVISGTVQPKVFNRNGEDEMEFNKGDVYLRDMKN------TNGHTAEINAGA 222

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-----QDKEASYFDPVWSPQGDLIAF 363
           + P    I      +   +++ + +    ++ I      +          WSP G  IA 
Sbjct: 223 WHPTDKSIFLTCSNDSTLRIWDVTNKRKQKQVIVVKSKERGARTKVTACAWSPDGKWIAG 282

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE-------DSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
               G    + +     +  R           ++      +S  G  +     + GD   
Sbjct: 283 ACLDGT---LHIWDTSSNFARPKYSCENAHPKNTETTGVAFSRDGLRVA---TRGGDDTV 336

Query: 417 KLYSI 421
           KL+ I
Sbjct: 337 KLWDI 341


>gi|304393548|ref|ZP_07375476.1| protease 2 [Ahrensia sp. R2A130]
 gi|303294555|gb|EFL88927.1| protease 2 [Ahrensia sp. R2A130]
          Length = 693

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/220 (12%), Positives = 76/220 (34%), Gaps = 18/220 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--------MILAPRFSSNGKR 271
           SP+ +    + Y++     ++  + R       + N            +     S + +R
Sbjct: 95  SPHGKWSYASRYEEGAEYPLFTREPRDGGEETVLFNGPKEAKDHEYFALGMMSHSPDHER 154

Query: 272 ALISVQKDEA--MDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFES-DREGKEQ 327
              SV  + +    +   DL S   +  L   +    S ++  D+   ++   D   +  
Sbjct: 155 LAWSVDTNGSEYHHMRIRDLASGEDSAELVRDVG---SFAWCADARSYLYVKVDENHRPN 211

Query: 328 LYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQER 384
               + +  +++ I  +++A ++     S  G  IA      ++  + +++ D   ++  
Sbjct: 212 KVFYRPHDGEEQLIYNEEDARFYVGLDRSLDGRWIAIGTGQNDEDEVRLLRADDPTAEPI 271

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           LL         +    G  L  +    G    ++ +  ++
Sbjct: 272 LLAPRRAGHEYSVDTHGDQLFITTNSGGSENFRIMTASID 311


>gi|303238424|ref|ZP_07324959.1| hypothetical protein AceceDRAFT_0307 [Acetivibrio cellulolyticus
           CD2]
 gi|302594128|gb|EFL63841.1| hypothetical protein AceceDRAFT_0307 [Acetivibrio cellulolyticus
           CD2]
          Length = 656

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 88/230 (38%), Gaps = 25/230 (10%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
               + Y+  +D+  L    +   I R  K I N   + ++     +G   +  +     
Sbjct: 373 KGAWIYYSNPNDDSKLYKMNISGNIKRKVKDIYNVGELNVS-----DG--CIYFLAAGYK 425

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQ 338
            ++Y V    N  + +            S   S I +    +D+  K  LY M+++GS +
Sbjct: 426 SNLYRVGRDDNGLDIV--GEDFITYMRIS--DSWIYYVVNDNDKGEKYNLYKMKTDGSKR 481

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             + +  + ++ +     + + I F      K  I  +K DGS + L+ E  +       
Sbjct: 482 TFLLEVDDWNFNNLNV--RDEWIYFQASDDGKRGIYKIKTDGSGKTLINEGEHYNINVI- 538

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS---DPQWVGF 445
             G+ + FS   D D G  ++   L+G  +T +N         + +WV +
Sbjct: 539 --GKWIYFS---DADDGGHIHKTLLDGSRDTTLNDDRSDELNIEGEWVFY 583



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 62/156 (39%), Gaps = 12/156 (7%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            K E  ++Y +    +    L      N + + +     I F++  +GK  +Y ++++GS
Sbjct: 464 DKGEKYNLYKMKTDGSKRTFLLEVDDWNFN-NLNVRDEWIYFQASDDGKRGIYKIKTDGS 522

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +  I++ +  +         G  I F+        I     DGS++  L +D + +   
Sbjct: 523 GKTLINEGEHYNINVI-----GKWIYFSDADDGG-HIHKTLLDGSRDTTLNDDRSDELNI 576

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
               G  + +  +      + +Y I  +G  +T ++
Sbjct: 577 ---EGEWVFY--RPSFIEETGVYKIRTDGSQKTRLS 607


>gi|226360460|ref|YP_002778238.1| S9C family peptidase [Rhodococcus opacus B4]
 gi|226238945|dbj|BAH49293.1| putative S9C family peptidase [Rhodococcus opacus B4]
          Length = 682

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 58/157 (36%), Gaps = 17/157 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRV----YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             S +   V  +      +  +      +DT        + +  + +  P  S +G+  +
Sbjct: 223 ALSDDGAFVVTSWTVPGPLASIRNILVRVDTETGARTVLVDDGDADLSDPVISPDGRHVV 282

Query: 274 ISVQKDEAMD------IYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREG 324
            + +     D      ++     +     +      +    S  +  D S ++  +D  G
Sbjct: 283 FARESHATPDSAPRFTLHRYSFDTGTVTDV--APGWDRWATSVVWLSDGSGLLVTADDRG 340

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           +  +++++ +G+D   ++ D +++Y D   +P G  +
Sbjct: 341 RAPIFLLR-DGADPAPVTTD-DSAYTDLQVAPDGSTV 375



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 56/169 (33%), Gaps = 24/169 (14%)

Query: 289 LQSNATERLTN-----TLFINISASY--SPDSSQIVFESDREG-----KEQLYVMQSNGS 336
            ++    +LT+        +   A+Y  S D + +V      G     +  L  + +   
Sbjct: 198 AENGQEPQLTDLTPMPGPAL-REANYALSDDGAFVVTSWTVPGPLASIRNILVRVDTETG 256

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVEDS 390
            +  +  D +A   DPV SP G  + F + S        +F +     D      +    
Sbjct: 257 ARTVLVDDGDADLSDPVISPDGRHVVFARESHATPDSAPRFTLHRYSFDTGTVTDVAPGW 316

Query: 391 NLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           +  A +  W   G  L+ +    G     L     +G +   + T   A
Sbjct: 317 DRWATSVVWLSDGSGLLVTADDRGRAPIFLLR---DGADPAPVTTDDSA 362



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/167 (12%), Positives = 44/167 (26%), Gaps = 7/167 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-----DDED 235
           +       I+N L  +D +      L    D  L +P  SP+ + V +A       D   
Sbjct: 236 TVPGPLASIRNILVRVDTETGARTVLVDDGDADLSDPVISPDGRHVVFARESHATPDSAP 295

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              ++               +     +  + S+G   L++        I+ +        
Sbjct: 296 RFTLHRYSFDTGTVTDVAPGWDRWATSVVWLSDGSGLLVTADDRGRAPIFLL-RDGADPA 354

Query: 296 RLTNTLFINISASYSPDSSQ-IVFESDREGKEQLYVMQSNGSDQKRI 341
            +T           +PD S      +          +         +
Sbjct: 355 PVTTDDSAYTDLQVAPDGSTVFALRASYAAPPHPVRIDITTGAVSLL 401



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/103 (14%), Positives = 42/103 (40%), Gaps = 14/103 (13%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSN-ATERLTNTLFINISASYS 310
             +     S++G+R +++    +         ++ +D     A  RLT       +A+++
Sbjct: 23  GRVGGLALSADGRRLVVAQSTLDEKSTKYVTALWEIDPTGEFAARRLTRGRTGESNATFT 82

Query: 311 PDSSQIVFESDREGKEQ------LYVMQSNGSDQKRISQDKEA 347
            D   ++F S R  +++      L+ + + G +   +++    
Sbjct: 83  SDGD-LLFTSSRPTQDEDDLPDDLWRLPARGGEAVIVARRGGG 124


>gi|224070386|ref|XP_002191028.1| PREDICTED: similar to Eif3b protein [Taeniopygia guttata]
          Length = 708

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 83/243 (34%), Gaps = 35/243 (14%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY               P+ +      ++  D   ++  D +     +    +  
Sbjct: 183 DLGNLRYWLED-----------PDCRDQYSVIFESGDRTSIFWNDIKEPVQIEDRARWTE 231

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             +  R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 232 TYV--RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 280

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSG 368
            +V  S     ++  + + +       +KR     E S   P+  WS  G    F + + 
Sbjct: 281 YLVTFSPLMDTQDDPQAIIIWDILTGQKKR-GFHCENSAHWPIFKWSHDGKF--FARMTS 337

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +  +I      G  ++  ++ + ++  +WSP G  + F   +D D  +++  + L  R E
Sbjct: 338 DTLSIYETPSMGLLDKKSLKINGIRDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPSRQE 397

Query: 429 TLI 431
             +
Sbjct: 398 IRV 400



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 15/200 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 365 SWSPGGNIIAFWVPEDKDIPARVTLMQLPSRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 424

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +            +I+ +  +    + +     I I+ ++ P+ S+  F        ++
Sbjct: 425 DRTPKGTQGVVTNFEIFRMREKQVPVDVVEMKESI-IAFAWEPNGSK--FAVLHGETPRI 481

Query: 329 YVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            V      N    + I    +       WSPQG  +          A+  +         
Sbjct: 482 SVSFYHVKNNGKIELIKTFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDCTMMN 541

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
           + E        W P+GR ++
Sbjct: 542 IAEHYTASDVEWDPTGRYIV 561



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/151 (11%), Positives = 45/151 (29%), Gaps = 4/151 (2%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            + GD+    +  +     G++ N      R+      +   ++ I+    + PN  K A
Sbjct: 414 QKNGDYLCVKVDRTPKGTQGVVTNFEIFRMREKQVPVDVVEMKESIIAF-AWEPNGSKFA 472

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
               +   I   +       +        +       +S  G+  +++  +     +  V
Sbjct: 473 VLHGETPRISVSFYHVKNNGKIELIKTFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFV 532

Query: 288 DLQSNATERLTNTL-FINISASYSPDSSQIV 317
           D        +       ++   + P    IV
Sbjct: 533 DTSDCTMMNIAEHYTASDVE--WDPTGRYIV 561


>gi|85709668|ref|ZP_01040733.1| hypothetical protein NAP1_12323 [Erythrobacter sp. NAP1]
 gi|85688378|gb|EAQ28382.1| hypothetical protein NAP1_12323 [Erythrobacter sp. NAP1]
          Length = 292

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 64/198 (32%), Gaps = 26/198 (13%)

Query: 199 DGA--NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-- 254
           DG     +++  + +    +P  S ++ ++ + T    D    YL           +   
Sbjct: 76  DGEWTGPQHILGTPEYTAQDPYLSEDEARLYFITRVRGDADIGYLTRDEAGDWADPVLLD 135

Query: 255 ---NFRSMILAPRFSSNGKRALISVQK---DEAMDIYSVDLQS---NATERLT---NTLF 302
              N          +  G  A  S  +   +   DIYS  L+    +   RL    NT  
Sbjct: 136 APINGPGNDYFVSITRAG-EAYWSSDRANDEGGYDIYSASLEGASDSEATRLPSPVNTRA 194

Query: 303 INISASYSPDSSQIVFESDRE---GKEQLYVMQSNGSD--QKRISQDKEASYFDPVWSP- 356
                   P+   ++F S R    G+  LY+   +G       I+ D+  +       P 
Sbjct: 195 YEGDPYIDPEGRYLIFASSRRRGLGRGDLYLSLPDGEGGWSYPIAFDERVNTPGHELCPL 254

Query: 357 ---QGDLIAFTKFSGEKF 371
               G  + FT     ++
Sbjct: 255 VTLDGSALLFTSNEDIRW 272


>gi|320588563|gb|EFX01031.1| WD domain containing protein [Grosmannia clavigera kw1407]
          Length = 583

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 57/160 (35%), Gaps = 17/160 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +++ RFS + +++A           V + +    +   ++    + +    +S
Sbjct: 265 LHDGAGDVWQVRFSHDGKRLASC----GAGHYVIIWEVPTFKVLLKLDGHVTGVGDISWS 320

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIV---FESDR 322
            N    L+S  +D    I+  D ++    RL       +S+  ++ D   IV   F+ DR
Sbjct: 321 PN-DTMLVSCGRDNQARIW--DTRTGLLLRLFERFDEPVSSCVWATDGLSIVLGSFDKDR 377

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                L      G  ++  +  K+        SP G  + 
Sbjct: 378 A----LCQWNLAG--ERLFTWTKKHRTEGLALSPNGQWLV 411



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 54/153 (35%), Gaps = 6/153 (3%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + +    +   RFS +GKR   S      + I+ V        +L   +      S+SP+
Sbjct: 265 LHDGAGDVWQVRFSHDGKRLA-SCGAGHYVIIWEVP-TFKVLLKLDGHVTGVGDISWSPN 322

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            + +V         Q  +  +      R+ +  +      VW+  G  I    F  ++ A
Sbjct: 323 DTMLVSC---GRDNQARIWDTRTGLLLRLFERFDEPVSSCVWATDGLSIVLGSFDKDR-A 378

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +      G +     +    +    SP+G+ L+
Sbjct: 379 LCQWNLAGERLFTWTKKHRTEGLALSPNGQWLV 411


>gi|291435105|ref|ZP_06574495.1| protein kinase [Streptomyces ghanaensis ATCC 14672]
 gi|291338000|gb|EFE64956.1| protein kinase [Streptomyces ghanaensis ATCC 14672]
          Length = 1067

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 31/232 (13%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             +SG     + + D      R L   R  +      SP+  ++A     D D   V L 
Sbjct: 518 RALSGDDAGDVRLWDTATGRPRALEGHRAAVHAV-CLSPDG-RLALTGGHDGD---VRLW 572

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL- 301
           DT   R  +R+      + A   + +G    ++   D  +  +  D+ +    R+ ++  
Sbjct: 573 DTATGRCLRRLSGHTGSVRAVCLTPDGST-ALTGGWDGTLRWW--DVATGRCLRVVDSPE 629

Query: 302 -----FINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                   ++A+  S D    +F     G+  L+    + +D +R+      + +  V S
Sbjct: 630 GPGGTGREVNAACLSADGRLALFV---GGQTVLW----DLADDRRVRTLDRGTIWPAVLS 682

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRS 403
                        ++  +      G   R L  D+    P W    S  GR 
Sbjct: 683 HDRRHAL--TGGDDRALVWWDLATGRSLRTLRADAR---PPWTAELSADGRF 729



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 67/208 (32%), Gaps = 23/208 (11%)

Query: 141  GKKFFSSPASWRKIA--HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-------- 190
             +         R +A  H +S  +    TG +G + +  + +  S               
Sbjct: 839  ARALPGHERDTRALAAWHRLS--LVTVRTGVRGAWPAGTVELPTSGTQAHATADGRRALC 896

Query: 191  ---NSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
               ++L + D  DG          D  +     S +++   +A    ED   V L D R 
Sbjct: 897  ADLDTLRLWDFEDGGRCVRTFDGHDGAVEAVSLSADER---FALSGGEDG-TVRLWDVRT 952

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             R    +    + + +  FS +G R   S  +D ++  +                    S
Sbjct: 953  GRCLSVLEGHGAKVRSVSFSGDG-RFAFSGGEDGSVRWWE-PATGRMLRAYEYGGQGVYS 1010

Query: 307  ASYSPDSSQIVFESDREGKEQLYVMQSN 334
               S D  + V  S +  + +L+ + S 
Sbjct: 1011 VCPSADG-RFVLSSGQGSRARLWELDSG 1037


>gi|115969879|ref|XP_001175780.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 340

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 55/158 (34%), Gaps = 13/158 (8%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +   FSP  + +A  ++  +    + L      +   ++       L+  +S +G+   
Sbjct: 144 AWTIAFSPEGRFLASGSHVGK----INLFGVESAKKESQLDTRGKFTLSIAYSPDGRFLA 199

Query: 274 ISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            S   D  ++I+  D+QS+     L        S  +SPDS  +   SD     Q+ +  
Sbjct: 200 -SGAIDGIVNIF--DIQSSKLLHTLEGHAKPIRSLCFSPDSQLLATASD---DGQIKIYD 253

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
              ++         +      + P      F   S +K
Sbjct: 254 VQQANLAGTLSGHSSWVTGIHFCPDNTH--FVSNSSDK 289



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 90/312 (28%), Gaps = 44/312 (14%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           G + +VTG V     D   V      V  ++Q                AH   DD    +
Sbjct: 27  GVENIVTGSV----DDYYSV------VYKQEQ----------------AH---DDSIWCV 57

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
              K D +     V+ SV   +        + D   +++        +     +P     
Sbjct: 58  AWMKSDRDGVENIVTGSVDDYVK---CWNWENDELKLKWTLEGHQLGVVSVDINPTGTIA 114

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           A ++ D      + L D  + +  + I           FS  G+    S      ++++ 
Sbjct: 115 ASSSLDS----HIRLWDLEVGKQMRSIDAGPVDAWTIAFSPEGRFLA-SGSHVGKINLFG 169

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           V+       +L       +S +YSPD     F +       + +     S      +   
Sbjct: 170 VESA-KKESQLDTRGKFTLSIAYSPDGR---FLASGAIDGIVNIFDIQSSKLLHTLEGHA 225

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                  +SP   L+A T     +  I  +++      L    S +    + P      F
Sbjct: 226 KPIRSLCFSPDSQLLA-TASDDGQIKIYDVQQANLAGTLSGHSSWVTGIHFCPDNTH--F 282

Query: 407 SRKKDGDTGSKL 418
                  T    
Sbjct: 283 VSNSSDKTVKVW 294


>gi|114593205|ref|XP_001158284.1| PREDICTED: WD repeat-containing protein 1 isoform 4 [Pan
           troglodytes]
          Length = 533

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 61/212 (28%), Gaps = 59/212 (27%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++ + +++A      E    V+L D+        +G                       
Sbjct: 36  AWTEDSKRIAVVGEGREKFGAVFLWDSGSS-----VGEITGHN----------------- 73

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 I SVD++ +   RL      N +A +             EG    +        
Sbjct: 74  ----KVINSVDIKQSRPYRLATGSDDNCAAFF-------------EGPPFKFKFTIG--- 113

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNL 392
                 D         +SP G+  A     G    I +      ++          D  +
Sbjct: 114 ------DHSRFVNCVRFSPDGNRFATASADG---QIYIYDGKTGEKVCALGGSKAHDGGI 164

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            A +WSP    L+      GD  SK++ + +N
Sbjct: 165 YAISWSPDSTHLL---SASGDKTSKIWDVSVN 193



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 8/91 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMI 260
           ++      + +   RFSP+  + A A+ D     ++Y+ D +       +G  +     I
Sbjct: 109 KFTIGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGI 164

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            A  +S +    L S   D+   I+ V + S
Sbjct: 165 YAISWSPDSTHLL-SASGDKTSKIWDVSVNS 194


>gi|299744135|ref|XP_001840898.2| vegetative incompatibility protein HET-E-1 [Coprinopsis cinerea
            okayama7#130]
 gi|298405981|gb|EAU80951.2| vegetative incompatibility protein HET-E-1 [Coprinopsis cinerea
            okayama7#130]
          Length = 1197

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/221 (14%), Positives = 68/221 (30%), Gaps = 31/221 (14%)

Query: 152  RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
                H     +   I  E   +    L    S+     +  L      G+          
Sbjct: 883  HSAPHLYHSALPAYIASEPSLWFHPQLAAVPSLSYSYQRRQLWTSHVGGS---------- 932

Query: 212  QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
              ++   FS ++  +A  + D    + ++   T         G+ R  + +  FS +G  
Sbjct: 933  --VWCVAFSQSRSLLASGSED--RTICLWNPQTGEALGEPLKGHSRG-VTSVAFSPDGTL 987

Query: 272  ALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
               S   D+ + ++  + Q+     E L        S ++SPD + +   S     + + 
Sbjct: 988  LA-SGSGDQTIRLW--NPQTGEALGEPLQGHSAWVTSVAFSPDGTLLASGS---WDKTIR 1041

Query: 330  VMQSNGSDQ--KRISQDKEASYFDPVWSP------QGDLIA 362
            +      +     +           +W+P       G L+A
Sbjct: 1042 LWNPQTGEALDGTLLASGSEDKTIRLWNPQTGEAQDGTLLA 1082



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 59/188 (31%), Gaps = 22/188 (11%)

Query: 231  YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            +    +  V  +     R      +    +    FS + +  L S  +D  + ++  + Q
Sbjct: 904  WFHPQLAAVPSLSYSYQRRQLWTSHVGGSVWCVAFSQS-RSLLASGSEDRTICLW--NPQ 960

Query: 291  SNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEA 347
            +     E L        S ++SPD + +   S   G + + +      +      Q   A
Sbjct: 961  TGEALGEPLKGHSRGVTSVAFSPDGTLLASGS---GDQTIRLWNPQTGEALGEPLQGHSA 1017

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQAPT-WSP---- 399
                  +SP G L+A   +      I +      +     LL   S  +    W+P    
Sbjct: 1018 WVTSVAFSPDGTLLASGSWDKT---IRLWNPQTGEALDGTLLASGSEDKTIRLWNPQTGE 1074

Query: 400  --SGRSLI 405
               G  L 
Sbjct: 1075 AQDGTLLA 1082


>gi|296195136|ref|XP_002745247.1| PREDICTED: WD repeat-containing protein 17 isoform 2 [Callithrix
           jacchus]
          Length = 1322

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P     +A  T  +      ++ + 
Sbjct: 411 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNG----AFIWNV 466

Query: 245 RIDRAPKRIGNFRSM-ILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R     +  I    +S  + KR   +   D    I ++D       +      
Sbjct: 467 QKGKIIQRFNEHGTNGIFCIAWSHKDSKRIA-TCSNDGFCIIRTID--GKVLHKY-KHPA 522

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 523 AVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGIL 582

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 583 CSGSDDGTVRIWDYTQD 599


>gi|296195134|ref|XP_002745246.1| PREDICTED: WD repeat-containing protein 17 isoform 1 [Callithrix
           jacchus]
          Length = 1283

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 67/197 (34%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P     +A  T  +      ++ + 
Sbjct: 387 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNG----AFIWNV 442

Query: 245 RIDRAPKRIGNFRSM-ILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R     +  I    +S  + KR   +   D    I ++D       +      
Sbjct: 443 QKGKIIQRFNEHGTNGIFCIAWSHKDSKRIA-TCSNDGFCIIRTID--GKVLHKY-KHPA 498

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 499 AVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGIL 558

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 559 CSGSDDGTVRIWDYTQD 575


>gi|296270506|ref|YP_003653138.1| prolyl oligopeptidase [Thermobispora bispora DSM 43833]
 gi|296093293|gb|ADG89245.1| Prolyl oligopeptidase [Thermobispora bispora DSM 43833]
          Length = 690

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 65/192 (33%), Gaps = 28/192 (14%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----SYSPD 312
             + +P +   G+R   + +  +                L + + ++ S      +Y PD
Sbjct: 71  GAVRSPVWR--GERRFFTRRLPDQEHAILYVADGAGERVLIDPMALDPSGLTTLDTYQPD 128

Query: 313 --SSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF-- 366
              +++ ++    G E  +LYV+                 Y    W P G+   + +   
Sbjct: 129 KEGNRLAYQISTGGDEESRLYVLDVATGQVIE-GPIDRCRYSPVAWLPGGEAFYYVRRLP 187

Query: 367 ------SGEKFA--IGVMKKDGS--QERLLVEDS----NLQAPTWSPSGRSLIFSRKKDG 412
                   E++   + + +   S  ++ L+  +     N    + S  GR L  S  +  
Sbjct: 188 PDQVPAGEEQYHRRVYLHRVGTSPDEDVLIFGEGMEKTNYYGVSVSRDGRWLTISASRGT 247

Query: 413 DTGSKLYSIDLN 424
              + L+  DL+
Sbjct: 248 APRNDLWIADLS 259



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 48/306 (15%), Positives = 95/306 (31%), Gaps = 35/306 (11%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQK 225
           T +     +R+ +   +   G  ++ L V+D   A  + +    D+  + P  + P  + 
Sbjct: 124 TYQPDKEGNRLAYQISTG--GDEESRLYVLDV--ATGQVIEGPIDRCRYSPVAWLPGGEA 179

Query: 226 VAYATYDDEDIL---------RVYLMDTRIDRAPKRIGNFRSMI----LAPRFSSNGKRA 272
             Y      D +         RVYL           +     M          S +G+  
Sbjct: 180 FYYVRRLPPDQVPAGEEQYHRRVYLHRVGTSPDEDVLIFGEGMEKTNYYGVSVSRDGRWL 239

Query: 273 LISVQKDEAM--DIYSVDLQSNA---TERLTNTLFIN--ISASYSPDSSQIVFESDREGK 325
            IS  +  A   D++  DL +++      +T    ++      +  D    VF      +
Sbjct: 240 TISASRGTAPRNDLWIADLSASSPEAPRLVTVQEGVDARTGLHFGRDGRLYVFTDLGAPR 299

Query: 326 EQLYVMQSNGSDQK----RISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKFAIGVMKKD 379
            ++ V        +     + +D  +   D          ++   +       I +   +
Sbjct: 300 GRICVTSPEHPTSEHWRDLVPEDPVSVLSDFAILDDLPEPVMLVGRTRHAISEITIHALE 359

Query: 380 GS---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTPA 435
                 E  L    ++ A T  P G    +    D  T + +Y  D   R  TL    P 
Sbjct: 360 TGERIGEVPLPGLGSIGAITERPEGGHEAWFTYTDNVTPTTVYRFDARTRETTLWEAAPG 419

Query: 436 YASDPQ 441
             + P+
Sbjct: 420 AVTVPE 425


>gi|242816786|ref|XP_002486816.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
 gi|218713281|gb|EED12705.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
          Length = 522

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 51/160 (31%), Gaps = 29/160 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISV 276
            FSP+   VA     +     +Y+ D       + I    +    +  FS  GK   ++ 
Sbjct: 356 AFSPDCNLVA-----NRRPPYIYIYDVAQRAVIETIHTPGKFGTFSLAFSPTGKHLALAT 410

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINIS------AS-----YSPDSSQIVFESDREGK 325
             +  + ++S++ +                       +     YSPD       S     
Sbjct: 411 N-EPCIRVWSLNNKGKVNR----GEGNQGEVIHLQLPTVTWLVYSPDGKIFACLS----A 461

Query: 326 EQLYVMQSNGSDQKRISQDKEASY---FDPVWSPQGDLIA 362
           E +  ++   +  +  S +        +  V+SP G  +A
Sbjct: 462 ENIVRIRDAETATELTSFEGSEGLRYGYGVVFSPDGRRLA 501



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 64/222 (28%), Gaps = 32/222 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S N Q+VA  T        V             + N     +A  FS +         
Sbjct: 317 AISQNAQRVAVQT-----PNNVIFYSLITFSQELSVPNVGGEQVA--FSPDCNLVA---- 365

Query: 278 KDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                 IY  D+   A      T   F   S ++SP    +   ++      + V   N 
Sbjct: 366 NRRPPYIYIYDVAQRAVIETIHTPGKFGTFSLAFSPTGKHLALATNE---PCIRVWSLNN 422

Query: 336 --------SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                    +Q  +   +  +    V+SP G + A          + +   + + E    
Sbjct: 423 KGKVNRGEGNQGEVIHLQLPTVTWLVYSPDGKIFACLSAEN---IVRIRDAETATELTSF 479

Query: 388 EDS----NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           E S          +SP GR L  +     D+   +Y     G
Sbjct: 480 EGSEGLRYGYGVVFSPDGRRLA-TFPPANDSTVVIYKATWEG 520


>gi|188577539|ref|YP_001914468.1| peptidase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188521991|gb|ACD59936.1| peptidase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 779

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/347 (14%), Positives = 98/347 (28%), Gaps = 68/347 (19%)

Query: 144 FFSSPASWR---KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           F    A+WR      H   D   Q+ +  +G    R   V          ++   +  DG
Sbjct: 135 FALDDAAWRCTLTTYHCAPDARPQAQSRPRGFGVVRDPLVPADTTPSRSPDARWEVLADG 194

Query: 201 ANI-----------RYLTPSRDQILFE---PRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            N+           R  +  R    F+     +SP+ Q++A          RV  ++   
Sbjct: 195 WNLMLRRVADGQVTRLSSDGRADDYFDLESVAWSPDSQQLAVYRVRPGLARRVTRVEAAP 254

Query: 247 DRAPKRIGNFR---------------------------------SMILAP-RFSSNGKRA 272
               + + + +                                    L+P ++ S+G+  
Sbjct: 255 AGGGQPVVHTQLYPKPGDAVDVERPVLFALDGTRRDVETDMFDNPYSLSPLQWRSDGRSV 314

Query: 273 LISVQKDEAMDIYSV--DLQSNATERLTNTLF---INISASYSPD----SSQIVFESDRE 323
                +     +  +  D +S              +    S+  D      ++++ S+R+
Sbjct: 315 AFEYVQRGFQRMRVIAVDARSGRAHVAVGEDARTFVYADRSFRHDVDGRGDEVLWISERD 374

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKF------SGEKFAIGVM 376
           G   LY+        KR          D +        I FT              +  +
Sbjct: 375 GWRHLYLFDGRNGQLKRQLTRGPWVVRDVLRVDDMQRRIWFTASGMDAGKDPYYRQLYSV 434

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLI-FSRKKDGDTGSKLYSID 422
             DG +   L           +  G+  +    + D     +L++ID
Sbjct: 435 DFDGRRLTRLTHTDADHDVAIADDGQHYVDVYSRPDLPPVMELHAID 481



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 66/242 (27%), Gaps = 50/242 (20%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL----APRFSS 267
                P  SP+ +    A     D   + L      +  +   + R+       +  +S 
Sbjct: 175 PADTTPSRSPDARWEVLA-----DGWNLMLRRVADGQVTRLSSDGRADDYFDLESVAWSP 229

Query: 268 NGKRALISVQKDEAMDIYS----VDLQSNATERLTN-----TLFINISASYSPDSSQIVF 318
           + ++  +   +       +               T         +++             
Sbjct: 230 DSQQLAVYRVRPGLARRVTRVEAAPAGGGQPVVHTQLYPKPGDAVDVE------------ 277

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                 +  L+ +     D +    D   S     W   G  +AF         + V+  
Sbjct: 278 ------RPVLFALDGTRRDVETDMFDNPYSLSPLQWRSDGRSVAFEYVQRGFQRMRVIAV 331

Query: 379 D---GSQERLLVEDSNLQAP---TWSPS----GRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           D   G     + ED+        ++       G  +++  ++DG     L+    +GRN 
Sbjct: 332 DARSGRAHVAVGEDARTFVYADRSFRHDVDGRGDEVLWISERDGWRHLYLF----DGRNG 387

Query: 429 TL 430
            L
Sbjct: 388 QL 389



 Score = 38.1 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 81/244 (33%), Gaps = 36/244 (14%)

Query: 90  KITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVE----FRL----WDVKDRKQIIG 141
           +      + R +   + G Q +V  ++  +  D + VE    F L     DV     +  
Sbjct: 240 RPGLARRVTRVEAAPAGGGQPVVHTQLYPKPGDAVDVERPVLFALDGTRRDV--ETDMFD 297

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
             +  SP  WR    +++ +  Q           R+  ++    SG    ++      G 
Sbjct: 298 NPYSLSPLQWRSDGRSVAFEYVQRGFQ-------RMRVIAVDARSGRAHVAV------GE 344

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-VYLMDTRIDRAPKRIGNFRSMI 260
           + R    +        R   + +        + D  R +YL D R  +  +++     ++
Sbjct: 345 DARTFVYADRSF----RHDVDGRGDEVLWISERDGWRHLYLFDGRNGQLKRQLTRGPWVV 400

Query: 261 LAP-RFSSNGKRALISVQKDEA------MDIYSVDLQSNATERLTNTLFINISASYSPDS 313
               R     +R   +    +A        +YSVD       RLT+T   +   + + D 
Sbjct: 401 RDVLRVDDMQRRIWFTASGMDAGKDPYYRQLYSVDFDGRRLTRLTHTDA-DHDVAIADDG 459

Query: 314 SQIV 317
              V
Sbjct: 460 QHYV 463


>gi|163840060|ref|YP_001624465.1| beta-lactamase family protein [Renibacterium salmoninarum ATCC
           33209]
 gi|162953536|gb|ABY23051.1| beta-lactamase family protein/peptidase S9 domain [Renibacterium
           salmoninarum ATCC 33209]
          Length = 1032

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 86/262 (32%), Gaps = 54/262 (20%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAP--KRIGNFRSMILAPRFSSNGKRALI------ 274
            + +A+     +   +++ +      A       +F      P  S++GK          
Sbjct: 6   GRSLAFLRASKDQPAQLHRIGAAGGEAEPLTDAADFPFGAGRPVLSADGKTIYFAAPVSI 65

Query: 275 ---------------SVQKDEAMD-------IYSVDLQSNATERLTNTLFINISASYSPD 312
                          S + D A +       I++ D+ S    +LT+  +       S D
Sbjct: 66  DAGYSATAPVVAKSLSYKYDGAGNFGSLRQHIFAFDVASGVARQLTDGDWHAGEPVVSAD 125

Query: 313 SSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S++ F       +D E   + + ++      K + +  +A+        +G+ +     
Sbjct: 126 GSKLAFTAALGECADLELSSEAWYLELADPMLK-LHKLGQAASVHGSLQWEGESVLAVGQ 184

Query: 367 SG---EKFAIGVMKKDGSQERLLVEDSNLQAPTWS----PSGR-------SLIFSRKKDG 412
                   ++  +  DGS +  L      +         P GR        + F  ++ G
Sbjct: 185 QRTEIGNASLWRLSVDGSLDVELSA-GLDRNVMIGGVGYPGGRPQLGEAGRIYFCVREGG 243

Query: 413 DTGSKLYSIDLNGRNETLINTP 434
           +T   L   +L+G  +T++  P
Sbjct: 244 NT--NLLCRELDGGIKTILGEP 263


>gi|110678336|ref|YP_681343.1| WD-containing repeat protein [Roseobacter denitrificans OCh 114]
 gi|109454452|gb|ABG30657.1| WD repeat protein [Roseobacter denitrificans OCh 114]
          Length = 442

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 77/224 (34%), Gaps = 29/224 (12%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +SV S     ++ +   DGA    L    D  + +  FSP+  +V  ++ D      + +
Sbjct: 132 QSVASASWDRTVRIWPIDGA-ASLLIEGHDNTVSDVAFSPDGTRVYTSSADG----TIRV 186

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D +     KR+      I     + +          D    + S+              
Sbjct: 187 WDAQTGAFLKRLVEHGFGINTLLVAPDESWLAY-GAVDGGTRLVSLP------------E 233

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNG------SDQKRISQDKEASYFDPVW- 354
            ++I   ++ D   I+  +  +  +++ +  + G      S   RI+ D +A+   PVW 
Sbjct: 234 GVDIG-DFTADRRPILAMAHSDKTDRIAIGDAQGYIMMIDSSALRITDDFQATPAGPVWA 292

Query: 355 ---SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              SP G  I     S    +  V   D + +      + +  P
Sbjct: 293 LAFSPDGQNIHAGGISDVVHSWPVGSLDSATQMTGTTRAFMTDP 336



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 22/145 (15%), Positives = 43/145 (29%), Gaps = 9/145 (6%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           V   +   +     Q+     L       I  + +PD   +   S       + +   +G
Sbjct: 94  VSAGDDYSVRLWSPQNGTVRELGRHNAKVIRLAAAPDGQSVASAS---WDRTVRIWPIDG 150

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQ 393
           +    I +  + +  D  +SP G  +  +   G    I V         +RL+     + 
Sbjct: 151 AASLLI-EGHDNTVSDVAFSPDGTRVYTSSADGT---IRVWDAQTGAFLKRLVEHGFGIN 206

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKL 418
               +P    L +     G     L
Sbjct: 207 TLLVAPDESWLAYGAVDGGTRLVSL 231


>gi|12836360|dbj|BAB23622.1| unnamed protein product [Mus musculus]
          Length = 606

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 76/257 (29%), Gaps = 55/257 (21%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + + D   I  +       +   +++P+   +A  + D    LR++    +       
Sbjct: 40  VILRNIDNPAIADIYTEHAHQVVVAKYAPSGFYIA--SGDISGKLRIWDTTQKEHLLKYE 97

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK--------------------DEAMDIYSVDLQSN 292
              F   I    ++ + KR  +  +                          I SVD++  
Sbjct: 98  YQPFAGKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDTGSSVGEITGHNKVINSVDIKQT 157

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RL      + +A +             EG    +              D        
Sbjct: 158 RPYRLATGSDDHCAAFF-------------EGPPFKFKFTIG---------DHSRFVNCV 195

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFS 407
            +SP G+  A     G    I +      ++          D  + A +WSP    L+  
Sbjct: 196 RFSPDGNRFATASADG---QIFIYDGKTGEKVCALGESKAHDGGIYAISWSPDSTHLL-- 250

Query: 408 RKKDGDTGSKLYSIDLN 424
               GD  SK++ +++N
Sbjct: 251 -SASGDKTSKIWDVNVN 266



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 49/331 (14%), Positives = 93/331 (28%), Gaps = 64/331 (19%)

Query: 108 AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
           A  +V  +    G       +  + R+WD   ++ ++  ++       + IA        
Sbjct: 58  AHQVVVAKYAPSGFYIASGDISGKLRIWDTTQKEHLLKYEYQPFAGKIKDIA-------- 109

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLC-----VMDRDGANIRYLTPSRDQILFEPR 218
                     +S+ + V            L      V +  G N   +  S D     P 
Sbjct: 110 -------WTEDSKRIAVVGEGREKFGAVFLWDTGSSVGEITGHN--KVINSVDIKQTRPY 160

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
                     A + +    +              IG+    +   RFS +G R   +   
Sbjct: 161 RLATGSDDHCAAFFEGPPFKFKFT----------IGDHSRFVNCVRFSPDGNRFA-TASA 209

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSN 334
           D    I+  D ++      L  +   +      S+SPDS+ ++  S   G +   +   N
Sbjct: 210 DG--QIFIYDGKTGEKVCALGESKAHDGGIYAISWSPDSTHLLSAS---GDKTSKIWDVN 264

Query: 335 GSDQKRISQDKEA---SYFDPVWSPQ-------GDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +                   +W             I +   +     + V+K      +
Sbjct: 265 VNSVVSTFPMGSNVLDQQLGCLWQKDHLLSISLSGYINYLDKNNPSKPLRVIKGHSKSIQ 324

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            L    N         G+S I+S   DG   
Sbjct: 325 CLTVHRNG--------GKSYIYSGSHDGHIN 347


>gi|118372682|ref|XP_001019536.1| hypothetical protein TTHERM_00628500 [Tetrahymena thermophila]
 gi|89301303|gb|EAR99291.1| hypothetical protein TTHERM_00628500 [Tetrahymena thermophila SB210]
          Length = 2160

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 74/215 (34%), Gaps = 10/215 (4%)

Query: 208  PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               D  L     S + + +A     + D L   + D +     K I  +   I +  FS 
Sbjct: 1328 DFNDSSLNISAISADGKYLATV---NPDGLSCNIYDLKEFDLIKIIDGYSQQITSIAFSK 1384

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            +G     S   D+   +++V  Q               S S+S D+  ++   ++     
Sbjct: 1385 DGNHFA-SGSLDQNCKVFNVQKQFELAHIFQENPSAISSVSFSLDNKYLLLTYEQS--LC 1441

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            +  +++   + KRI    +        S  G  +A   F        +  +     ++  
Sbjct: 1442 VQSVKNKFLNLKRIEAHTQ-IMKSMALSSDGKYLATCSFDKTCIIWDMQNEFNMVHQIQA 1500

Query: 388  EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               ++   T+SP G+ L    +   D   K++ +D
Sbjct: 1501 HTESVNYITFSPDGKYLATISQ---DKTCKIWDVD 1532



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/265 (14%), Positives = 90/265 (33%), Gaps = 54/265 (20%)

Query: 201  ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             N+ +   +  + +    FSP+ + +A  + D     +++ +D +     K  G+  ++ 
Sbjct: 1492 FNMVHQIQAHTESVNYITFSPDGKYLATISQD--KTCKIWDVDNKFQLFDKIQGDQINID 1549

Query: 261  LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---------------- 304
             +  FS++GK    +   D+   I   +      +++ N    +                
Sbjct: 1550 -SIAFSADGKYLA-ATNLDKTFKIMKFEKGFQTIKKIENQSAYDFYSKIKFSRDMKYLGV 1607

Query: 305  -------------------------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                                      + ++SP+ + +      E   ++Y ++ N  +Q 
Sbjct: 1608 IKGSYICEIYDVSKGFELVKEILNVSTFAFSPNGNYLA-TGCWEKSCRIYSVERNF-EQI 1665

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
             I+++         +S  G  +  T  S     I  ++KD  Q          N+    +
Sbjct: 1666 AITEEHSKDITSIDFSQDGKYLV-TGSSDTTCKIWSIEKD-FQLINTTFGHTQNIYQVAF 1723

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSID 422
            S   + L+      GD   K++ +D
Sbjct: 1724 SVDSKYLV---SLSGDQTFKIWGLD 1745



 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/219 (15%), Positives = 76/219 (34%), Gaps = 13/219 (5%)

Query: 206  LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
            +T    + +    FS + + +   + D     +++ ++          G+ +  I    F
Sbjct: 1667 ITEEHSKDITSIDFSQDGKYLVTGSSDT--TCKIWSIEKDFQLINTTFGHTQ-NIYQVAF 1723

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            S + K  + S+  D+   I+ +D Q    + L        SA +SP    ++  SD    
Sbjct: 1724 SVDSKYLV-SLSGDQTFKIWGLDKQFEYIKSLKGHANAITSAIFSPSCKYLITSSD---D 1779

Query: 326  EQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                V  +     + IS   + +       +SP G  +A   +         +K+     
Sbjct: 1780 STCRVYDTEKG-FEVISTINQHAQKVTSVDFSPDGKYLATVSWDQTCKIFNALKEFELVI 1838

Query: 384  RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +   D  +    +S  G+ L        D   K++ ++
Sbjct: 1839 SIQAHDFFISYCKFSQDGKYLATCSW---DQSCKIWDVN 1874



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 70/221 (31%), Gaps = 16/221 (7%)

Query: 205  YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +        + +  FS + + +A  + D+    +++      +      G+ +  + +  
Sbjct: 1881 HTIRGHSLEIIQVTFSYDGKYLATCSLDE--TCKIWNAQKEFEIITTIQGHTQG-VTSVA 1937

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS NGK   ++   D +  I+ V  Q    + +        S  +S D   +   S+   
Sbjct: 1938 FSKNGKY-FVTGSLDNSFKIWEVQNQFQLIKTIEQHTHTVSSICFSLDDKFLATGSE--- 1993

Query: 325  KEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             +   +       +   I +          +SP G  +  T        I        + 
Sbjct: 1994 DKTCKIWDVENQFELTCIVEGHSKDILHISFSPDGRYLT-TSSQDISSKIWT----TKKL 2048

Query: 384  RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                   N+ A  +S  G+ +       G+   K++    N
Sbjct: 2049 SQQKNQDNITALAYSTDGKYIA---SCSGNNQWKIWEQSTN 2086



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 45/297 (15%), Positives = 94/297 (31%), Gaps = 68/297 (22%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGN 255
            G  +        Q +    FSP+ + +A  ++D      + L+ + +   I      I  
Sbjct: 1790 GFEVISTINQHAQKVTSVDFSPDGKYLATVSWDQTCKIFNALKEFELVISIQAHDFFISY 1849

Query: 256  FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             +       FS +GK    +   D++  I+ V+ +      +       I  ++S D   
Sbjct: 1850 CK-------FSQDGKYLA-TCSWDQSCKIWDVNNEFQLLHTIRGHSLEIIQVTFSYDGKY 1901

Query: 316  IVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +   S     ++   + +   + + I+  Q          +S  G            F I
Sbjct: 1902 LATCS----LDETCKIWNAQKEFEIITTIQGHTQGVTSVAFSKNGKYFVTGSLDNS-FKI 1956

Query: 374  G-VMK---------------------------KDGSQERL-----------LV-----ED 389
              V                               GS+++            L        
Sbjct: 1957 WEVQNQFQLIKTIEQHTHTVSSICFSLDDKFLATGSEDKTCKIWDVENQFELTCIVEGHS 2016

Query: 390  SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID--LNGRNETLINTPAYASDPQWVG 444
             ++   ++SP GR L  S +   D  SK+++       +N+  I   AY++D +++ 
Sbjct: 2017 KDILHISFSPDGRYLTTSSQ---DISSKIWTTKKLSQQKNQDNITALAYSTDGKYIA 2070


>gi|322507670|gb|ADX03124.1| 3-carboxymuconate cyclase [Acinetobacter baumannii 1656-2]
 gi|323518486|gb|ADX92867.1| hypothetical protein ABTW07_2443 [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 416

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 80/275 (29%), Gaps = 45/275 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF------ 256
              S          S + + +    Y+ +D        L         + + N       
Sbjct: 143 TVNSHGGHPTHASISLDGKFLFVSNYSAFDKGRGGVAVLPILPNGHLGEMVQNIVFAEGS 202

Query: 257 --------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-- 306
                        +  FS +GK    S   ++ +  +  +      + L      ++S  
Sbjct: 203 GHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYNPS--KPQPLEADKSRDVSFK 260

Query: 307 -------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------QDKEASYF 350
                    +SP+  Q    ++   + ++          K+++           +  S  
Sbjct: 261 HGSGPRHMVFSPNGKQAYITAEM--RSEIVTFNVQDGHLKKVAELKLVHEDKTPEFKSAS 318

Query: 351 DPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS--GRSLIF 406
             + SP G   IA  + +  K  +  ++++G   +  V  +N   P  +S    G+ L  
Sbjct: 319 GIILSPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGIEPRAFSFDESGKYLYV 378

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +          L+  D    +   +   A  S P 
Sbjct: 379 TNVYSN--NISLFRFDTKNGSLKPLGDAAKISTPT 411


>gi|321265117|ref|XP_003197275.1| hypothetical protein CGB_M1340C [Cryptococcus gattii WM276]
 gi|317463754|gb|ADV25488.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
          Length = 338

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/273 (16%), Positives = 96/273 (35%), Gaps = 34/273 (12%)

Query: 193 LCVMDRDGANIRYLTPSRD----QILFEPRF--------SPNQQKVAYATYDDEDILRVY 240
           LC    D   IR+          QI   P++        SPN+   AY        +R++
Sbjct: 33  LCTAGYD-HTIRFWEAWSGICYRQITLSPQWKQVNRLAISPNK---AYVAAAGNSTVRIW 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + +  +     +      ++A  +S+ GK  + +  +D  + ++  D ++  T+R+   
Sbjct: 89  DIQSLSNTPIATLEGHTGNVVALAYSALGKWIV-TGSEDGTVKVW--DTRTAQTQRIYLH 145

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                     P+  +++   D+ G  +++ +  N    + +  D++        S  G+ 
Sbjct: 146 DCPVNDVVIHPNQGELISC-DQSGSVKIWDLAENTCTHELV-PDEDVPIRSVSISSDGNT 203

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW------SPSGRSLIFSRKKDGDT 414
           +     SG  +   ++    +   L+   S      +      SP  + L        D 
Sbjct: 204 LVAANDSGMVYVWRIIPVPNANANLVPVTSFRAHTKYITRCLLSPDTKYLA---TCSADH 260

Query: 415 GSKLYS---IDLNGRNETLINTPAYASDPQWVG 444
             K++S   ID     +TL     +  D  +  
Sbjct: 261 TVKIWSTAGIDYT-LEKTLAGHQRWVWDAAFSA 292


>gi|299754117|ref|XP_001833770.2| amidohydrolase [Coprinopsis cinerea okayama7#130]
 gi|298410611|gb|EAU88062.2| amidohydrolase [Coprinopsis cinerea okayama7#130]
          Length = 1139

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 48/136 (35%), Gaps = 8/136 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +  + +Y+      I  +Y  +       K +         P  S +G+      +  
Sbjct: 154 SVDSSRFSYSKDVHSGIYAIYQRNLTTGSTEKIVITRPGGASRPELSRDGRSLAFVRRVR 213

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--VFE-SDRE----GKEQLYVMQ 332
           +   +   DL++     + + L  +++   +P  +     F  SD         Q+Y + 
Sbjct: 214 DKAALVLKDLETGTIHHIWHGLTYDLTTISAPMGTYPSYAFTPSDDAVIIWAAGQIYRVP 273

Query: 333 SNGSDQ-KRISQDKEA 347
            + +++ +R+S     
Sbjct: 274 LSVNERGERVSGGTPH 289



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 44/138 (31%), Gaps = 8/138 (5%)

Query: 310 SPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           S DSS+  +  D   G   +Y         ++I   +      P  S  G  +AF +   
Sbjct: 154 SVDSSRFSYSKDVHSGIYAIYQRNLTTGSTEKIVITRPGGASRPELSRDGRSLAFVRRVR 213

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWS-PSGRSLIFSRKKDGD-----TGSKLYSID 422
           +K A+ +   +      +         T S P G    ++     D        ++Y + 
Sbjct: 214 DKAALVLKDLETGTIHHIWHGLTYDLTTISAPMGTYPSYAFTPSDDAVIIWAAGQIYRVP 273

Query: 423 LNGRNETLINTPAYASDP 440
           L+  NE           P
Sbjct: 274 LS-VNERGERVSGGTPHP 290


>gi|291405595|ref|XP_002719553.1| PREDICTED: Notchless gene homolog [Oryctolagus cuniculus]
          Length = 579

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 59/178 (33%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 158

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSN-GSDQKRISQDKEASYFDPVW-----S 355
            +S ++SPD  ++       G    Q+ +   + G    R             W     +
Sbjct: 159 VLSIAWSPDGKKLA-----SGCKNGQILLWDPSTGKQVGRALVGHSKWITGLSWEPLHVN 213

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + V     G  ER+L     ++    W   G  L++S  +D
Sbjct: 214 PECRYVASSSKDGS---VRVWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQD 266



 Score = 43.1 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 4/133 (3%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  + ++S         R+T    +     +SPDS  +   S     + + +  
Sbjct: 344 LVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRVVASASF---DKSIKLWD 400

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +   A+ +   WS    L+  +  S     +  +K       L      +
Sbjct: 401 GRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLATDLPGHADEV 459

Query: 393 QAPTWSPSGRSLI 405
            A  WSP G+ + 
Sbjct: 460 YAVDWSPDGQRVA 472



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/177 (10%), Positives = 51/177 (28%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 131 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSIAWSPDGKKLA---SGCKNGQILLWDPST 187

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I    +     +   +    S  KD ++ ++           LT  
Sbjct: 188 GKQVGRALVGHSKWITGLSWEPLHVNPECRYVA-SSSKDGSVRVWDT-TAGRCERILTGH 245

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 246 TQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 63/204 (30%), Gaps = 38/204 (18%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ--VLVTGRV-IKEGKDRLRVEFRLW 131
           R+  F        +  +   D     Q+W         LV G+   +           LW
Sbjct: 302 RTGAFEP-----AEATVNAQDLQGSLQEWKERALSRYNLVRGQSPERLVSGSDDFTLFLW 356

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
              + K+ +           R   H     I Q +       +SR++       S     
Sbjct: 357 SPAEDKKPLA----------RMTGHQA--LINQVLFSP----DSRVV------ASASFDK 394

Query: 192 SLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           S+ +   DG   +YL         +++  +S + + +   + D      + + D +  + 
Sbjct: 395 SIKLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKL 448

Query: 250 PKRIGNFRSMILAPRFSSNGKRAL 273
              +      + A  +S +G+R  
Sbjct: 449 ATDLPGHADEVYAVDWSPDGQRVA 472


>gi|239926777|ref|ZP_04683730.1| protein kinase [Streptomyces ghanaensis ATCC 14672]
          Length = 1019

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 78/232 (33%), Gaps = 31/232 (13%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
             +SG     + + D      R L   R  +      SP+  ++A     D D   V L 
Sbjct: 470 RALSGDDAGDVRLWDTATGRPRALEGHRAAVHAV-CLSPDG-RLALTGGHDGD---VRLW 524

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL- 301
           DT   R  +R+      + A   + +G    ++   D  +  +  D+ +    R+ ++  
Sbjct: 525 DTATGRCLRRLSGHTGSVRAVCLTPDGST-ALTGGWDGTLRWW--DVATGRCLRVVDSPE 581

Query: 302 -----FINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                   ++A+  S D    +F     G+  L+    + +D +R+      + +  V S
Sbjct: 582 GPGGTGREVNAACLSADGRLALFV---GGQTVLW----DLADDRRVRTLDRGTIWPAVLS 634

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRS 403
                        ++  +      G   R L  D+    P W    S  GR 
Sbjct: 635 HDRRHAL--TGGDDRALVWWDLATGRSLRTLRADAR---PPWTAELSADGRF 681



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 67/208 (32%), Gaps = 23/208 (11%)

Query: 141 GKKFFSSPASWRKIA--HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-------- 190
            +         R +A  H +S  +    TG +G + +  + +  S               
Sbjct: 791 ARALPGHERDTRALAAWHRLS--LVTVRTGVRGAWPAGTVELPTSGTQAHATADGRRALC 848

Query: 191 ---NSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              ++L + D  DG          D  +     S +++   +A    ED   V L D R 
Sbjct: 849 ADLDTLRLWDFEDGGRCVRTFDGHDGAVEAVSLSADER---FALSGGEDG-TVRLWDVRT 904

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            R    +    + + +  FS +G R   S  +D ++  +                    S
Sbjct: 905 GRCLSVLEGHGAKVRSVSFSGDG-RFAFSGGEDGSVRWWE-PATGRMLRAYEYGGQGVYS 962

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSN 334
              S D  + V  S +  + +L+ + S 
Sbjct: 963 VCPSADG-RFVLSSGQGSRARLWELDSG 989


>gi|12856025|dbj|BAB30542.1| unnamed protein product [Mus musculus]
 gi|26326165|dbj|BAC26826.1| unnamed protein product [Mus musculus]
          Length = 434

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 81/207 (39%), Gaps = 10/207 (4%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y       ++   +FSP    +A A+ D    +R++++D +   +  +       + +  
Sbjct: 12  YRYVGHKDVVTSLQFSPQGNLLASASRD--RTVRLWVLDRKGKSSEFKAHTAP--VRSVD 67

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS++G + L++  +D+++ ++S+  Q      L         A +SPD   IV  S+   
Sbjct: 68  FSADG-QLLVTASEDKSIKVWSMFRQ-RFLYSLYRHTHWVRCAKFSPDGRLIVSCSE--- 122

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +  +          D         ++P G  IA +  S     I  ++ +   + 
Sbjct: 123 DKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTCIA-SAGSDHAVKIWDIRMNKLLQH 181

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             V    +   ++ P G SL+ +    
Sbjct: 182 YQVHSCGVNCLSFHPLGNSLVTASSDG 208


>gi|15805984|ref|NP_294684.1| hypothetical protein DR_0960 [Deinococcus radiodurans R1]
 gi|6458689|gb|AAF10540.1|AE001948_9 hypothetical protein DR_0960 [Deinococcus radiodurans R1]
          Length = 396

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 53/132 (40%), Gaps = 9/132 (6%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSN 292
            + + +Y   +   R   R+     + +AP  S +G+   +++Q + A     +  L + 
Sbjct: 132 GNAVELYDAASGQLRRTVRLPPEVLLNVAPAISPDGRWLAVAIQTEAATGEGRLGLLSTT 191

Query: 293 ATERLTNTLFINISAS----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                       +S +    +SPD +++    +R G  QL+ +    + ++  +   +  
Sbjct: 192 DPVYRFFLKSAGLSGTSALAFSPDGTRLA-VGNRNGYAQLWNLD---TRERLSTVKGKGV 247

Query: 349 YFDPVWSPQGDL 360
             +  +SP G L
Sbjct: 248 PLNLAFSPDGKL 259



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 12/137 (8%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFE--PRFSPNQQKVAYATYDDEDILRVYLM 242
           V G+  N++ + D     +R       ++L    P  SP+ + +A A   +       L 
Sbjct: 127 VRGVGGNAVELYDAASGQLRRTVRLPPEVLLNVAPAISPDGRWLAVAIQTEAATGEGRLG 186

Query: 243 DTRIDRAPKRI---GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                    R        S   A  FS +G R  +   ++    ++++D      ERL+ 
Sbjct: 187 LLSTTDPVYRFFLKSAGLSGTSALAFSPDGTRLAV-GNRNGYAQLWNLD----TRERLST 241

Query: 300 --TLFINISASYSPDSS 314
                + ++ ++SPD  
Sbjct: 242 VKGKGVPLNLAFSPDGK 258


>gi|187923239|ref|YP_001894881.1| 6-phosphogluconolactonase [Burkholderia phytofirmans PsJN]
 gi|187714433|gb|ACD15657.1| 6-phosphogluconolactonase [Burkholderia phytofirmans PsJN]
          Length = 431

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/333 (14%), Positives = 90/333 (27%), Gaps = 49/333 (14%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRK-------QIIGKKFFSSPASWRKIAHTISDD 161
            +LV      + +      F   D K  +       Q +   +       R +       
Sbjct: 70  DMLVGTYTGPKSEGLYVYRF---DTKTGEATRVSAAQTVNPSYLVVSRDRRFV------Y 120

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQ-ILFEPRF 219
               + G+ G    R    +    +   + + L  +  DG +  YL+ S D   L    +
Sbjct: 121 AVNEMPGDNGPATQRGGISAFRFDAASGQLTFLNKVSSDGNDPCYLSLSPDGKYLLTANY 180

Query: 220 S----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           S    P      +    D  +    L        P +     S + +  FS +G      
Sbjct: 181 SVAADPGGSFAVFPLQADGQVGASVLTVHHEGGGPVKGRQDNSHVHSTVFSPDGHYLF-- 238

Query: 276 VQKDEAMDIYSV---DLQSNATERLTNTLFINISA-------SYSPDSSQIVFESDREGK 325
            Q   A  +YS       S      T+  +    A        +  D       S+    
Sbjct: 239 AQDLGADKLYSYRYTPDGSRGLFGPTDWRYNQEKAGSGPRHLVFGADGKHAYLTSEMAAT 298

Query: 326 EQLYVMQSNGSDQKRIS--------QDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVM 376
             +     N     ++                     SP G  +  T         I  +
Sbjct: 299 --VSTFDYNDGKLTQVQTLPLTEPGFKGAVGAAAIHLSPDGRFLYATNRGDANDIVIFSV 356

Query: 377 KKDGSQERLLVEDSNL-QAPT-WS--PSGRSLI 405
                  + +   S++ ++P  ++  P+G  LI
Sbjct: 357 DPTNGHLKKVGHQSSMGKSPREFAIDPTGNWLI 389


>gi|15233721|ref|NP_194712.1| VIP3 (vernalization independence 3); nucleotide binding / protein
           binding [Arabidopsis thaliana]
 gi|4914407|emb|CAB43658.1| putative protein [Arabidopsis thaliana]
 gi|7269882|emb|CAB79741.1| putative protein [Arabidopsis thaliana]
 gi|30725340|gb|AAP37692.1| At4g29830 [Arabidopsis thaliana]
 gi|332660283|gb|AEE85683.1| WD repeat-containing protein 61 [Arabidopsis thaliana]
          Length = 321

 Score = 48.9 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 72/226 (31%), Gaps = 25/226 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S  I + + V D D      +  +    ++  +F P    +A A         V L DT 
Sbjct: 77  SSSIDSFVRVFDVDTNATIAVLEAPPSEVWGMQFEPKGTILAVA---GGSSASVKLWDTA 133

Query: 246 IDR-------------APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             R              P    + +  +L+  +S NGKR       D  + ++ VD +S 
Sbjct: 134 SWRLISTLSIPRPDAPKPSDKTSSKKFVLSVAWSPNGKRLA-CGSMDGTICVFDVD-RSK 191

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              +L        S  +SP   +++F    +G   + +  + G           +     
Sbjct: 192 LLHQLEGHNMPVRSLVFSPVDPRVLFSGSDDG--HVNMHDAEGKTLLGSMSGHTSWVLSV 249

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             SP G  IA          + +           + + N Q   WS
Sbjct: 250 DASPDGGAIATGSSDRT---VRLWDLKMRAAIQTMSNHNDQ--VWS 290



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 33/280 (11%), Positives = 83/280 (29%), Gaps = 46/280 (16%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G +  ++ +   D  ++          +      P+    A ++ D    +     +  
Sbjct: 35  TGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNAT 94

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-------- 297
           I            M     F   G    ++     ++ ++     + +   +        
Sbjct: 95  IAVLEAPPSEVWGMQ----FEPKGTILAVAGGSSASVKLW----DTASWRLISTLSIPRP 146

Query: 298 --------TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                   T++    +S ++SP+  ++   S  +G   + V   + S      +      
Sbjct: 147 DAPKPSDKTSSKKFVLSVAWSPNGKRLACGS-MDGT--ICVFDVDRSKLLHQLEGHNMPV 203

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW------SPSGRS 403
              V+SP    + F+        + +   +G      +  S     +W      SP G +
Sbjct: 204 RSLVFSPVDPRVLFSGSDDG--HVNMHDAEGK----TLLGSMSGHTSWVLSVDASPDGGA 257

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           +        D   +L+ +    +    I T +  +D  W 
Sbjct: 258 IA---TGSSDRTVRLWDL----KMRAAIQTMSNHNDQVWS 290


>gi|324505383|gb|ADY42315.1| F-box/WD repeat-containing protein TBL1X [Ascaris suum]
          Length = 671

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 9/111 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S  +   +  M  D A    +  +++  ++  R+SP    +A A++D      V L D  
Sbjct: 525 SDDMTLKVWSMSSDTAIHDLMAHNKE--IYTIRWSPIGYTLASASFDH----TVRLWDVD 578

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             +  + +      + +  FS +GK    S   D ++ I+  D+ S    +
Sbjct: 579 RGQCLRTLTKHTEPVYSVGFSPDGKYVA-SGSFDRSVYIW--DVLSGKLIQ 626



 Score = 43.5 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 43/247 (17%), Positives = 84/247 (34%), Gaps = 28/247 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G       V   DG  +RY   +    +F  +++    K+  A  D        + D  
Sbjct: 399 TGCYDGYARVWATDG-RLRYTLGAHKGPIFALKWNQRGDKILSAGVDK----TTIVWDPI 453

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--I 303
                +      S  L   + ++      S   D  + +  +       + L        
Sbjct: 454 KGVQMQVFQFHTSSALDVDWMAD--DMFASCSTDMCIHVCRL----GCEKPLKTFQGHTN 507

Query: 304 NISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            ++A  Y   S  +   SD +   +++ M S+ +    ++ +KE   +   WSP G  +A
Sbjct: 508 EVNAVKYDSHSRLLASCSD-DMTLKVWSMSSDTAIHDLMAHNKE--IYTIRWSPIGYTLA 564

Query: 363 FTKFSGEKFAIGVMKKDGSQ-ERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              F      + +   D  Q  R L      + +  +SP G+ +       G     +Y 
Sbjct: 565 SASFD---HTVRLWDVDRGQCLRTLTKHTEPVYSVGFSPDGKYVA-----SGSFDRSVYI 616

Query: 421 ID-LNGR 426
            D L+G+
Sbjct: 617 WDVLSGK 623


>gi|317030735|ref|XP_001392152.2| WD domain protein [Aspergillus niger CBS 513.88]
          Length = 408

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 55/152 (36%), Gaps = 12/152 (7%)

Query: 184 VVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V+      +  +D +G  IR Y T        +   S + + +A       +   VY+ 
Sbjct: 220 GVTQDGHIKVWDLDTNGEEIRDYETKGSFGTCID--LSADGRFIA----SGHENGSVYIF 273

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTL 301
            T   R P  +      + A  FS  GK         ++  I   D  S      L+   
Sbjct: 274 STESGRMPFSLSGLVKPVRAVAFSPGGKFLA---AAGDSKVIVLYDTSSGEQVASLSGHT 330

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              +S S+SP    ++  S  +GK +++ + +
Sbjct: 331 AWVMSLSWSPTGEYLLSGSF-DGKVKVWSIDT 361



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 57/175 (32%), Gaps = 24/175 (13%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY------S 310
            + + A   S +G+     V +D  + ++ +D                   S+      S
Sbjct: 203 PADVWAIALSEDGQYLA-GVTQDGHIKVWDLDTNGEEIR------DYETKGSFGTCIDLS 255

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D     F +       +Y+  +                    +SP G  +A    +G+ 
Sbjct: 256 ADGR---FIASGHENGSVYIFSTESGRMPFSLSGLVKPVRAVAFSPGGKFLA---AAGDS 309

Query: 371 FAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             I +      ++   L    + + + +WSP+G  L+       D   K++SID 
Sbjct: 310 KVIVLYDTSSGEQVASLSGHTAWVMSLSWSPTGEYLL---SGSFDGKVKVWSIDT 361



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 16/160 (10%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++    S + Q +A  T D    ++V+ +DT      +      S       S++G+   
Sbjct: 206 VWAIALSEDGQYLAGVTQD--GHIKVWDLDTN-GEEIRDYETKGSFGTCIDLSADGRFIA 262

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLY 329
                 E   +Y    +S    R+  +L   +      ++SP    +    D    + + 
Sbjct: 263 ---SGHENGSVYIFSTESG---RMPFSLSGLVKPVRAVAFSPGGKFLAAAGD---SKVIV 313

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +  ++  +Q        A      WSP G+ +    F G+
Sbjct: 314 LYDTSSGEQVASLSGHTAWVMSLSWSPTGEYLLSGSFDGK 353


>gi|317025483|ref|XP_001389171.2| WD repeat-containing protein [Aspergillus niger CBS 513.88]
          Length = 373

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 65/223 (29%), Gaps = 23/223 (10%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRA 272
           P   P+    A AT   +         T ++  P+ I      F   +  P  S +    
Sbjct: 157 PTIHPDGPLNAAATQQQQKPTFTPSTYTALEPHPQPIQTNATTFSHHMSTPS-SPD--LH 213

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L +   +  + I S          L       +S S +P    +       G     +  
Sbjct: 214 LFATTGEGTVKIISYP-SFANLHTLHAHTSACLSISLAPTGRYLAV-----GGSDALISL 267

Query: 333 SNGSD---QKRISQDKEASYFDPVWSPQGDLIA----FTKFSGEKFAIGVMKKDGSQERL 385
            + +D   ++ +S +   +     WS  G  I          G    I   +   S   +
Sbjct: 268 WDTTDWICKRTVSSNNGGAVRGVSWSFDGRFICGACDEVGCGGNGLEIFHAETGESVHTV 327

Query: 386 LVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                  S + A  W PS   L +S   DG     L  +   G
Sbjct: 328 PTGGNANSGIPAVAWHPSRYWLAYSTTADGSGPGGLRIVGAAG 370


>gi|302548617|ref|ZP_07300959.1| putative WD-40 repeat protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302466235|gb|EFL29328.1| putative WD-40 repeat protein [Streptomyces himastatinicus ATCC
            53653]
          Length = 1287

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 54/337 (16%), Positives = 109/337 (32%), Gaps = 69/337 (20%)

Query: 119  EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
            +G     V  RLWD++ R+ +  ++        RK A +  D +   +  E G       
Sbjct: 720  DGLGSGTVTVRLWDLERRRTLFEQRVPG----LRKAAVSRDDRLV-GLCPEDGR------ 768

Query: 179  FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
             +    V+G    +L    R G N                FSP+  +V +   +      
Sbjct: 769  -IRLWRVAGQRPVTLKNAYRVGEN----------DECAVAFSPDGDRVTFGVGER----- 812

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                 T    + +R+  FR    A  R++ +GK  L S Q    + ++   +  +   + 
Sbjct: 813  ---AGTWDTASGRRVDEFRGNGSAAMRYTGDGKFLLTSGQ--GKIQMWRRPVSGDPVFQY 867

Query: 298  TNTLFINISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              T   +   S  P +  + + +D        + +  +       +R + D     +   
Sbjct: 868  ATTGDSSSDFSIDPGARFVRYIADAGPDTGAGKAVRTVSLGDLAHQRWTTDPPQGMWLG- 926

Query: 354  WSPQGDLIAFTKFSGEKFAIGVMK----KDGSQERLLVEDSNLQAP-------------- 395
              P G  +A  + S  +     +     +D      +   S    P              
Sbjct: 927  --PDGATLATARSSQGQERFRFVDVRSGRDKGNAPEISTCSGADTPGERGGAPDASCFGL 984

Query: 396  -TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              ++ +GRS  ++          L S+D  G  + ++
Sbjct: 985  VAFAANGRSAAYT----------LTSVDEPGSRQRVV 1011



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 71/233 (30%), Gaps = 43/233 (18%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              SP+   +A +     +  R  + D R  +  + +       L    S +G+  +    
Sbjct: 1036 ALSPDGSTLAVSLRRGTETWRSEVWDVRTRKRTRVVKGVGGDAL--TISPDGRWLV---- 1089

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINIS--------------------ASYSPDSSQIV 317
                 D ++VDL S +    T +     +                     ++SPD   + 
Sbjct: 1090 ---TADGHAVDLTSPSARVRTLSAGAGTADLPPAGGAASKGLPWTGVEVMAFSPDGRYLA 1146

Query: 318  FESDREGKEQLYVMQSN---GSDQKRIS---QDKEASYFDPVWSPQGDLIAFTKFSG--E 369
               D  G+  L     +   G+    I+   QD  A      +S     +A     G   
Sbjct: 1147 -AGDHSGRVTLLDGDLSKRLGTMSGLITDAHQDSAAPVTALGFSHDSRTLAVAGLDGTLR 1205

Query: 370  KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +     +  GS      +   +Q+  +S    ++  +        S+ Y + 
Sbjct: 1206 LWDAAANQPLGSVLPNPSDP--VQSVAFSRDDGTVTVASD---HIPSQTYRVS 1253



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 70/204 (34%), Gaps = 25/204 (12%)

Query: 218 RFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAP--KRIGNFRSM---ILAPRFSSNG 269
           RF+P  + +A   + + D   +L+           P  +R G +R +         S +G
Sbjct: 614 RFAPAPEDLADQLFLSDDGRVLLQATGRQVTAWDVPSHRRTGRYRGIGDDWQVSALSPDG 673

Query: 270 KRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +R  +S     A+     D+         LT+      +A + P     V   D  G   
Sbjct: 674 RRLALSGNGGLALW----DVAGGRRIGAPLTSR--WPTTAVFGPSGRT-VLADDGLGSGT 726

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL- 386
           + V   +   ++ + + +         S    L+      G    I + +  G +   L 
Sbjct: 727 VTVRLWDLERRRTLFEQRVPGLRKAAVSRDDRLVGLCPEDG---RIRLWRVAGQRPVTLK 783

Query: 387 ----VEDSNLQAPTWSPSGRSLIF 406
               V +++  A  +SP G  + F
Sbjct: 784 NAYRVGENDECAVAFSPDGDRVTF 807



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 59/321 (18%), Positives = 103/321 (32%), Gaps = 47/321 (14%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           R+   G   L     LWDV   ++I         + W   A          + G  G   
Sbjct: 675 RLALSGNGGLA----LWDVAGGRRIGA----PLTSRWPTTA----------VFGPSG--- 713

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            R +   + + SG +   L     D    R L   R   L +   S + + V     D  
Sbjct: 714 -RTVLADDGLGSGTVTVRLW----DLERRRTLFEQRVPGLRKAAVSRDDRLVGLCPEDGR 768

Query: 235 -DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
             + RV        +   R+G   +   A  FS +G R    V +         D  S  
Sbjct: 769 IRLWRVAGQRPVTLKNAYRVG--ENDECAVAFSPDGDRVTFGVGERAGTW----DTASG- 821

Query: 294 TERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             R+        +A  Y+ D  + +  S  +GK Q++    +G    + +   ++S  D 
Sbjct: 822 -RRVDEFRGNGSAAMRYTGDG-KFLLTSG-QGKIQMWRRPVSGDPVFQYATTGDSS-SDF 877

Query: 353 VWSPQGDLIAFTK----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS-PSGRSLIFS 407
              P    + +       +G   A+  +       +    D       W  P G +L  +
Sbjct: 878 SIDPGARFVRYIADAGPDTGAGKAVRTVSLGDLAHQRWTTDPPQGM--WLGPDGATLATA 935

Query: 408 RKKDGDTGSKLYSIDLNGRNE 428
           R   G    +   +  +GR++
Sbjct: 936 RSSQGQERFRFVDVR-SGRDK 955


>gi|256262120|ref|ZP_05464652.1| WD-repeat family protein [Brucella melitensis bv. 2 str. 63/9]
 gi|263091821|gb|EEZ16143.1| WD-repeat family protein [Brucella melitensis bv. 2 str. 63/9]
          Length = 323

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/281 (14%), Positives = 93/281 (33%), Gaps = 28/281 (9%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           + GK   +     R +    +  +   +      + + +       V      +      
Sbjct: 55  VDGKSLVTGGEDGR-VCRIDAKGVVTELANIPRKWITAVATGPNGTVGFASGKTAWSRAA 113

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG    +    +++ +    F+P  Q++A A Y+        L+       P  +  ++ 
Sbjct: 114 DGKVQEFT---QERSVEGIAFAPKGQRLAIARYNG-----ATLIWAGTAAKPVEL-EWKG 164

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +   FS +G+  + S+Q++ A+  +   L+ N   R+T         S+S  +  +  
Sbjct: 165 AHIGITFSPDGRFLITSMQEN-ALHGWR--LEDNKHMRMTGYPAKVKDWSWSAKAKWLA- 220

Query: 319 ESDREGKEQLYVMQSNGSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                G     V    G D         +    ++        P G+ IA   ++     
Sbjct: 221 ---TSGAPAAIVWPFAGKDGPMGKAPLELGLRGDSMVTSVACHP-GEDIAAIGYNDG--M 274

Query: 373 IGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKD 411
           I +++    +E LL       + +  W   G  L+F  +  
Sbjct: 275 ILIVRFADQKEVLLRRPGKGAITSMAWDEDGYRLVFGSQAG 315



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 28/202 (13%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----F 302
               +       +L+   + +GK  +      E   +  +D +      L N        
Sbjct: 36  DDGHQTSTVHDGLLSAAMAVDGKSLV---TGGEDGRVCRIDAK-GVVTELANIPRKWITA 91

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +    +       + F S     +  +   ++G  Q+     +E S     ++P+G  +A
Sbjct: 92  VATGPN-----GTVGFAS----GKTAWSRAADGKVQE---FTQERSVEGIAFAPKGQRLA 139

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +++G      +     ++   L         T+SP GR LI S +++   G +L    
Sbjct: 140 IARYNGATL---IWAGTAAKPVELEWKGAHIGITFSPDGRFLITSMQENALHGWRL---- 192

Query: 423 LNGRNETLINTPAYASDPQWVG 444
            + ++  +   PA   D  W  
Sbjct: 193 EDNKHMRMTGYPAKVKDWSWSA 214


>gi|239501571|ref|ZP_04660881.1| hypothetical protein AbauAB_04606 [Acinetobacter baumannii AB900]
          Length = 417

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 80/275 (29%), Gaps = 45/275 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF------ 256
              S          S + + +    Y+ +D        L         + + N       
Sbjct: 143 TVNSHGGHPTHASISLDGKFLFVSNYSAFDKGRGGVAVLPILPNGHLGEMVQNIVFSEGS 202

Query: 257 --------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-- 306
                        +  FS +GK    S   ++ +  +  +      + L      ++S  
Sbjct: 203 GHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYNPS--KPQPLEADKSRDVSFK 260

Query: 307 -------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------QDKEASYF 350
                    +SP+  Q    ++   + ++          K+++           +  S  
Sbjct: 261 HGSGPRHMVFSPNGKQAYITAEM--RSEIVTFNVQDGHLKKVAELKLVHEDKTPEFKSAS 318

Query: 351 DPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS--GRSLIF 406
             + SP G   IA  + +  K  +  ++++G   +  V  +N   P  +S    G+ L  
Sbjct: 319 GIILSPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGIEPRAFSFDESGKYLYV 378

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +          L+  D    +   +   A  S P 
Sbjct: 379 TNVYSN--NISLFRFDTKNGSLKPLGDAAKISTPT 411


>gi|213158424|ref|YP_002319722.1| hypothetical protein AB57_2373 [Acinetobacter baumannii AB0057]
 gi|215483120|ref|YP_002325327.1| hypothetical protein ABBFA_001424 [Acinetobacter baumannii
           AB307-0294]
 gi|213057584|gb|ACJ42486.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
 gi|213988189|gb|ACJ58488.1| hypothetical protein ABBFA_001424 [Acinetobacter baumannii
           AB307-0294]
          Length = 414

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 80/275 (29%), Gaps = 45/275 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF------ 256
              S          S + + +    Y+ +D        L         + + N       
Sbjct: 141 TVNSHGGHPTHASISLDGKFLFVSNYSAFDKGRGGVAVLPILPNGHLGEMVQNIVFAEGS 200

Query: 257 --------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-- 306
                        +  FS +GK    S   ++ +  +  +      + L      ++S  
Sbjct: 201 GHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYNPS--KPQPLEADKSRDVSFK 258

Query: 307 -------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------QDKEASYF 350
                    +SP+  Q    ++   + ++          K+++           +  S  
Sbjct: 259 HGSGPRHMVFSPNGKQAYITAEM--RSEIVTFNVQDGHLKKVAELKLVHEDKTPEFKSAS 316

Query: 351 DPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS--GRSLIF 406
             + SP G   IA  + +  K  +  ++++G   +  V  +N   P  +S    G+ L  
Sbjct: 317 GIILSPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGIEPRAFSFDESGKYLYV 376

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +          L+  D    +   +   A  S P 
Sbjct: 377 TNVYSN--NISLFRFDTKNGSLKPLGDAAKISTPT 409


>gi|170589749|ref|XP_001899636.1| Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The
           Structure Of A C. Elegans Homologue Of Yeast Actin
           Interacting Protein 1, putative [Brugia malayi]
 gi|158593849|gb|EDP32444.1| Chain A, Two Seven-Bladed Beta-Propeller Domains Revealed By The
           Structure Of A C. Elegans Homologue Of Yeast Actin
           Interacting Protein 1, putative [Brugia malayi]
          Length = 614

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 52/162 (32%), Gaps = 10/162 (6%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-T 298
           Y+ D      P+ +   R M L    S +G++ +          +Y   +Q+     + T
Sbjct: 7   YVQDATFASLPRTV---RGMPLGLHASPDGQKLIYC----NGNSVYIRSIQNPKECEIYT 59

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   A YSP    I    D+ GK +++         K           D  WS   
Sbjct: 60  EHANPTTVAKYSPSGFYIA-SGDQSGKIRIWDATQPSHILKAEYPILSGPIRDIAWSDDS 118

Query: 359 DLIAFTKFSGEKF-AIGVMKKDGSQERLLVEDSNLQAPTWSP 399
             IA      E+F  + +     S   L  +   + +  + P
Sbjct: 119 KRIAVVGEGRERFGHVFLFDTGTSNGNLSGQSRTMSSIDFRP 160



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 91/282 (32%), Gaps = 62/282 (21%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRF----------SPNQQ--------KVAYATYDDED 235
              D +G   R+   S D     P            SPN           +A+ ++    
Sbjct: 343 FTADFEGNITRWCLNSGDSERLLPAVHSSQVSDMCLSPNGNLVSIGWDDSIAFTSF-PGS 401

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPR--------FSSNGKRALI------------- 274
           +  V     ++   P+++    S  +A          FS +GK+ ++             
Sbjct: 402 LDNVQSNKVKLSSQPRQVALGSSGKIAVVACQKSVTIFS-DGKQMVLQNIEYEASCVAVA 460

Query: 275 -------SVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
                     +D  + IY ++       + ++ T  I  S S+SP+ S +V   D   K 
Sbjct: 461 PDSRLTAVGSQDGKVHIYELNGNQMKEIKTISQTGSI-TSLSWSPNGSFLVAT-DANRKV 518

Query: 327 QLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             Y + ++             A      WSP    +A            +      +  +
Sbjct: 519 IPYSVDNDYKCVTEKDWTFHSARVSCSAWSPDSRFVATGGIDTNVIVWDLKH--SGEHPI 576

Query: 386 LVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           +++ ++  +P     W  S R +        D+  K++++++
Sbjct: 577 IIKGAHTMSPINGIDWLGSNRII----TVGQDSVLKIWTVNV 614



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 66/164 (40%), Gaps = 17/164 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQ 277
           +SP+ Q++A A+ D    ++++ + ++       IG N     L+  ++      +    
Sbjct: 250 WSPDGQRIATASGD--KTIKIWDVSSKKLEKTFVIGKNVDDQQLSIIWTK-----VFLAG 302

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              +  I  +DL+S +  ++       I+A        + F +D EG    + +  +G  
Sbjct: 303 VSLSGFINILDLESGSVSKVLKGHNKPITALTVCSEKALAFTADFEGNITRWCLN-SGDS 361

Query: 338 QKRISQDKEASYFDPVWSPQGDL--------IAFTKFSGEKFAI 373
           ++ +     +   D   SP G+L        IAFT F G    +
Sbjct: 362 ERLLPAVHSSQVSDMCLSPNGNLVSIGWDDSIAFTSFPGSLDNV 405



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 56/340 (16%), Positives = 104/340 (30%), Gaps = 61/340 (17%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA------------------ 155
           G  I  G    ++  R+WD      I+  ++       R IA                  
Sbjct: 74  GFYIASGDQSGKI--RIWDATQPSHILKAEYPILSGPIRDIAWSDDSKRIAVVGEGRERF 131

Query: 156 -HTISDDIYQSITGEKGDFNSRILF-----VSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            H    D   S     G   +             +VSG   N++ + +  G   ++LT  
Sbjct: 132 GHVFLFDTGTSNGNLSGQSRTMSSIDFRPARPYRLVSGSEDNTVALFE--GPPFKFLTLF 189

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-----RIGNFRSMILAPR 264
            +   F      N     +A+   +  + +Y   T            +       + A  
Sbjct: 190 HEHTRFVYCVRYNADSTLFASSGADGKVILYEGTTGQKEGELMDDQCKGVAHAGSVFALC 249

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI------VF 318
           +S +G+R   +   D+ + I+  D+ S   E+ T  +  N+      D  Q+      VF
Sbjct: 250 WSPDGQRIA-TASGDKTIKIW--DVSSKKLEK-TFVIGKNV------DDQQLSIIWTKVF 299

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +       + ++        ++ +             +   +AFT           +  
Sbjct: 300 LAGVSLSGFINILDLESGSVSKVLKGHNKPITALTVCSE-KALAFTADFEGNITRWCLN- 357

Query: 379 DGSQERLL--VEDSNLQAPTWSPSGR--------SLIFSR 408
            G  ERLL  V  S +     SP+G         S+ F+ 
Sbjct: 358 SGDSERLLPAVHSSQVSDMCLSPNGNLVSIGWDDSIAFTS 397



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 33/240 (13%), Positives = 82/240 (34%), Gaps = 29/240 (12%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +           ++SP+   +A  + D    +R++                   I    +
Sbjct: 57  IYTEHANPTTVAKYSPSGFYIA--SGDQSGKIRIWDATQPSHILKAEYPILSGPIRDIAW 114

Query: 266 SSNGKRALISVQ-KDEAMDIYSVDLQSNA---TERLTNTLFINISA-------SYSPDSS 314
           S + KR  +  + ++    ++  D  ++    + +      I+          S S D++
Sbjct: 115 SDDSKRIAVVGEGRERFGHVFLFDTGTSNGNLSGQSRTMSSIDFRPARPYRLVSGSEDNT 174

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKF 371
             +F    EG    +   +   +  R       +    +++     G +I +   +G+K 
Sbjct: 175 VALF----EGPP--FKFLTLFHEHTRFVYCVRYNADSTLFASSGADGKVILYEGTTGQK- 227

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
              +M     Q + +    ++ A  WSP G+ +  +    GD   K++ +      +T +
Sbjct: 228 EGELMD---DQCKGVAHAGSVFALCWSPDGQRIATAS---GDKTIKIWDVSSKKLEKTFV 281


>gi|21312318|ref|NP_081389.1| WD repeat-containing protein 5B [Mus musculus]
 gi|81917086|sp|Q9D7H2|WDR5B_MOUSE RecName: Full=WD repeat-containing protein 5B
 gi|12843923|dbj|BAB26165.1| unnamed protein product [Mus musculus]
 gi|39794004|gb|AAH64045.1| WD repeat domain 5B [Mus musculus]
 gi|74138349|dbj|BAE38035.1| unnamed protein product [Mus musculus]
 gi|74146390|dbj|BAE28955.1| unnamed protein product [Mus musculus]
 gi|117574244|gb|ABK41106.1| CDW6/WDR5B [Mus musculus]
 gi|148665489|gb|EDK97905.1| WD repeat domain 5B [Mus musculus]
          Length = 328

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 74/225 (32%), Gaps = 18/225 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +R         +   +FSPN + +A +  D      + +         K +      I
Sbjct: 29  YALRLTLAGHSAAISSVKFSPNGEWLASSAAD----ALIIIWGAYDGNCKKTLYGHSLEI 84

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R + S   D+ + ++ +       + L           ++P S+ IV  S
Sbjct: 85  SDVAWSSDSSRLV-SASDDKTLKVWDM-RSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGS 142

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E + + +       +             ++  G LI    + G      +     
Sbjct: 143 F---DESVKIWEVKTGKCLKTLSAHSDPISAVNFNCNGSLIVSGSYDG---LCRIWDAAS 196

Query: 381 SQ-ERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            Q  R L ++ N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 197 GQCLRTLADEGNPPVSFVKFSPNGKYILTATL---DNTLKLWDYS 238



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 77/219 (35%), Gaps = 16/219 (7%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG N +         + +  +S +  ++  A+ D      + + D R  +  K +    
Sbjct: 69  YDG-NCKKTLYGHSLEISDVAWSSDSSRLVSASDDK----TLKVWDMRSGKCLKTLKGHS 123

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             +    F+      ++S   DE++ I+ V       + L+       + +++ + S IV
Sbjct: 124 DFVFCCDFNPP-SNLIVSGSFDESVKIWEV-KTGKCLKTLSAHSDPISAVNFNCNGSLIV 181

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             S  +G  +++   ++G   + ++ +         +SP G  I           + +  
Sbjct: 182 SGSY-DGLCRIWDA-ASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDNT---LKLWD 236

Query: 378 KDGSQERLLVEDSNLQ----APTWSPSGRSLIFSRKKDG 412
               +          +      ++S +GR  + S  +D 
Sbjct: 237 YSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDN 275



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 10/131 (7%)

Query: 185 VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VSG       + D   G  +R L    +  +   +FSPN + +  AT D+     + L D
Sbjct: 181 VSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTATLDN----TLKLWD 236

Query: 244 TRIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
               R  K     ++    L   FS  G++ ++S  +D  + I+  +LQ+    +RL   
Sbjct: 237 YSRGRCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSEDNMVYIW--NLQTKEIVQRLQGH 294

Query: 301 LFINISASYSP 311
             + ISA+  P
Sbjct: 295 TDVVISAACHP 305


>gi|320103084|ref|YP_004178675.1| WD40 repeat-containing protein [Isosphaera pallida ATCC 43644]
 gi|319750366|gb|ADV62126.1| WD40 repeat, subgroup [Isosphaera pallida ATCC 43644]
          Length = 1277

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 54/147 (36%), Gaps = 25/147 (17%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-------QSNATERL-------TNT 300
              + I+A  FS +G+R   +   D ++ ++ V+        +  A +R+        N 
Sbjct: 188 GHDNAIVASVFSPDGRRLA-TGSLDGSIILWEVNAIAPEDRDRPRALKRIWLADANRGNA 246

Query: 301 LFINISAS-------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                  +       ++PD S ++  SD  G   L V  S    ++  ++  EA   D  
Sbjct: 247 DAAASGPTRTPTCLVFTPDGSLLI-ASDSLGG--LTVWDSQNGTRRVSTKLGEARVNDLA 303

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +P G  +      G    + +   DG
Sbjct: 304 IAPDGRDLLAASADGRLTRVTLPNLDG 330


>gi|195616936|gb|ACG30298.1| WD-repeat protein-like [Zea mays]
          Length = 448

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 58/182 (31%), Gaps = 10/182 (5%)

Query: 191 NSLCVMDRDGANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           N   V + D    +     R D  +     SP+ + V        D     L+D+   + 
Sbjct: 257 NDCGVREYDMERYQLFKHFRFDWPVNHTSLSPDGKLVIIV----GDDTDALLIDSNSGKT 312

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              +        A  +S +G     +  +D+   I+     + +   L   +    S  +
Sbjct: 313 IHSMKGHLDFSFASAWSPDGLTFA-TGNQDKTCRIWDARNLTESVHVLRGNVGAIRSIRF 371

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +PD     F S  E  + +++        KR   D         +SP  D + +   S  
Sbjct: 372 TPDGH---FLSMAEAADFVHIFDIKSDYNKRQELDFFGEVSGMSFSPDTDTL-YVGISDR 427

Query: 370 KF 371
            +
Sbjct: 428 TY 429



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 59/143 (41%), Gaps = 7/143 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDR 322
             S +GK  +I     +  D   +D  S  T   +   L  + ++++SPD        ++
Sbjct: 285 SLSPDGKLVIIV---GDDTDALLIDSNSGKTIHSMKGHLDFSFASAWSPDGLTFA-TGNQ 340

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +   +++  + N ++   + +    +     ++P G  ++  + + +   I  +K D ++
Sbjct: 341 DKTCRIWDAR-NLTESVHVLRGNVGAIRSIRFTPDGHFLSMAE-AADFVHIFDIKSDYNK 398

Query: 383 ERLLVEDSNLQAPTWSPSGRSLI 405
            + L     +   ++SP   +L 
Sbjct: 399 RQELDFFGEVSGMSFSPDTDTLY 421


>gi|254423301|ref|ZP_05037019.1| hypothetical protein S7335_3457 [Synechococcus sp. PCC 7335]
 gi|196190790|gb|EDX85754.1| hypothetical protein S7335_3457 [Synechococcus sp. PCC 7335]
          Length = 407

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/167 (14%), Positives = 53/167 (31%), Gaps = 18/167 (10%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +  L       ++    SP+++   + + D    + V+ M++           +R  
Sbjct: 201 GELLYSLPTPAGSPVWTVAISPDER--TFISGDYNGTITVWDMESGE-------ALYRQS 251

Query: 260 ILAPRFS----SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           +  P +S     +GK        D+   I       N  +          + + +PD + 
Sbjct: 252 VDMPVWSIAIAPDGKS--FVSANDDGTIIQWDRASGNVIKEFVGHRSTARAVAITPDGNT 309

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +   S       + +   N  D K    +  +       SP G  +A
Sbjct: 310 LASGS---WDTTIKLWDLNSGDLKATLNEHSSRVVTLAISPDGKTLA 353



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 22/168 (13%), Positives = 57/168 (33%), Gaps = 23/168 (13%)

Query: 248 RAPKRIGNFRSMILAPRF----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           R+ + + +  +   +P +    S + +R  IS   +  + ++  D++S            
Sbjct: 199 RSGELLYSLPTPAGSPVWTVAISPD-ERTFISGDYNGTITVW--DMESGEA----LYRQS 251

Query: 304 NISASYS----PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                +S    PD    V  +D      +        +  +      ++      +P G+
Sbjct: 252 VDMPVWSIAIAPDGKSFVSAND---DGTIIQWDRASGNVIKEFVGHRSTARAVAITPDGN 308

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
            +A   +      I +   +    +  + + + +  T   SP G++L 
Sbjct: 309 TLASGSWDTT---IKLWDLNSGDLKATLNEHSSRVVTLAISPDGKTLA 353


>gi|182437160|ref|YP_001824879.1| putative peptidase [Streptomyces griseus subsp. griseus NBRC 13350]
 gi|178465676|dbj|BAG20196.1| putative peptidase [Streptomyces griseus subsp. griseus NBRC 13350]
          Length = 613

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 57/176 (32%), Gaps = 10/176 (5%)

Query: 260 ILAPRFS---SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +  P ++    +  R+L         ++Y+ D  S    ++T+          +PD   +
Sbjct: 20  VSLPDWAEDAPD--RSLFVSNATGTYELYAWDRASGRQRQVTDRPNGTTDGVLTPDGEAV 77

Query: 317 VFESDREGKEQLYVM--QSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAI 373
            + SD +G E    M     G D +  +     SY         G  +       +   I
Sbjct: 78  WWFSDTDGDEFGVWMRQPFGGGDDEPAAPGLAPSYPAGLAIGRDGSAVIGRSTDEDGTTI 137

Query: 374 GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRN 427
            ++ + G +   +     +      S  G  +     + GD   S L  +  +G  
Sbjct: 138 HLVPEPGGEPVEIYRHRESAGVGDLSHDGTLIALEHTEHGDAMHSALRVVRPDGST 193


>gi|158335667|ref|YP_001516839.1| WD-40 repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158305908|gb|ABW27525.1| WD40 repeat protein [Acaryochloris marina MBIC11017]
          Length = 798

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 54/370 (14%), Positives = 112/370 (30%), Gaps = 56/370 (15%)

Query: 81  LISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK----DRLRVEFRLWDVKDR 136
            I+Q     + T   SI    +        + T  +  +             ++WD+K  
Sbjct: 468 PIAQLPPPGQATTGQSIAAPVNGQKGHWDTITTLSISPDSGTLVSGSRDFTLKIWDLKTG 527

Query: 137 KQI--IGKKFFSSPASWRKIAHTISDD---IYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           + +  + + +    +S     H I D    I  SI+G+   ++     +S S V+     
Sbjct: 528 QLLNTLSEHYEPVVSS-----HIIDDGQSLISSSISGKVLQWDLTTATLSRSFVN----- 577

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
               M  +G     +   + +I+    +                   + L +   D+  +
Sbjct: 578 -YTAMRPEGGIRATVIDPKKRIMASSAW----------------GGSILLYNLATDKVTR 620

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA--- 307
                 +       S + K  + +   D  +  +  ++Q+     RL NT     S    
Sbjct: 621 IPSQLMASEQTMVLSPDAKSLV-TSNSDGQIQQW--NVQTGKLVRRLPNTQGWQSSELTS 677

Query: 308 --SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             + SP  + ++      G   L+          +  +  E        S     +    
Sbjct: 678 AIALSPQGNTLI-TGSWGGNLGLW--NFQTGKLIKNFKAHEKRVASLAVSTDNKFLI--- 731

Query: 366 FSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             GE   I +      Q    L     ++     SP  R L+       D   K++++  
Sbjct: 732 SGGEDQTIKIWSLKTGQLIQTLTAHQGSISTLAISPDNRWLV---SGSSDRSIKVWNLKT 788

Query: 424 NGRNETLINT 433
                TL+N+
Sbjct: 789 GKLLRTLLNS 798


>gi|58532048|emb|CAE05101.3| OSJNBa0009K15.21 [Oryza sativa Japonica Group]
 gi|125589699|gb|EAZ30049.1| hypothetical protein OsJ_14105 [Oryza sativa Japonica Group]
          Length = 139

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 28/82 (34%), Gaps = 14/82 (17%)

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG------------DTGSKLYSIDLNGRN 427
           G              P +S   +SL+F+                     ++Y++D++G N
Sbjct: 20  GGWCTAATAAGPTNHPWFSSDSKSLVFTSDYAAVSAEPVSNPHHYQPYGEIYTVDIDGSN 79

Query: 428 ETLINTPAY-ASDPQWVG-FMD 447
              +   ++    P W   F+D
Sbjct: 80  IRRLTHNSFEDGTPSWTPYFLD 101



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 14/72 (19%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQK--------------DEAMDIYSVDLQSNATERLTN 299
                    P FSS+ K  + +                     +IY+VD+  +   RLT+
Sbjct: 26  ATAAGPTNHPWFSSDSKSLVFTSDYAAVSAEPVSNPHHYQPYGEIYTVDIDGSNIRRLTH 85

Query: 300 TLFINISASYSP 311
             F + + S++P
Sbjct: 86  NSFEDGTPSWTP 97



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 15/64 (23%)

Query: 307 ASYSPDSSQIVFESDREG--------------KEQLYVMQSNGSDQKRISQDKEASYFDP 352
             +S DS  +VF SD                   ++Y +  +GS+ +R++ +       P
Sbjct: 35  PWFSSDSKSLVFTSDYAAVSAEPVSNPHHYQPYGEIYTVDIDGSNIRRLTHNSF-EDGTP 93

Query: 353 VWSP 356
            W+P
Sbjct: 94  SWTP 97


>gi|326928921|ref|XP_003210621.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Meleagris gallopavo]
          Length = 755

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 83/243 (34%), Gaps = 35/243 (14%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY               P+ +      ++  D   ++  D +     +    +  
Sbjct: 230 DLGNLRYWLED-----------PDCRDQYSVIFESGDRTSIFWNDIKEPVQIEDRARWTE 278

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             +  R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 279 TYV--RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 327

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSG 368
            +V  S     ++  + + +       +KR     E S   P+  WS  G    F + + 
Sbjct: 328 YLVTFSPLMDTQDDPQAIIIWDILTGQKKR-GFHCENSAHWPIFKWSHDGKF--FARMTS 384

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +  +I      G  ++  ++ + ++  +WSP G  + F   +D D  +++  + L  R E
Sbjct: 385 DTLSIYETPSMGLLDKKSLKINGIRDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPARQE 444

Query: 429 TLI 431
             +
Sbjct: 445 IRV 447



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 25/205 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 412 SWSPGGNIIAFWVPEDKDIPARVTLMQLPARQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 471

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT-----LFINISASYSPDSSQIVFESDRE 323
            +            +I+ +       +++          I I+ ++ P+ S+  F     
Sbjct: 472 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKESI-IAFAWEPNGSK--FAVLHG 523

Query: 324 GKEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              ++ V      N    + I    +       WSPQG  +          A+  +    
Sbjct: 524 ETPRISVSFYHVKNNGKIELIKTFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSD 583

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI 405
                + E        W P+GR ++
Sbjct: 584 CTMMNIAEHYTASDVEWDPTGRYIV 608



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 18/151 (11%), Positives = 45/151 (29%), Gaps = 4/151 (2%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            + GD+    +  +     G++ N      R+      +   ++ I+    + PN  K A
Sbjct: 461 QKNGDYLCVKVDRTPKGTQGVVTNFEIFRMREKQVPVDVVEMKESIIAF-AWEPNGSKFA 519

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
               +   I   +       +        +       +S  G+  +++  +     +  V
Sbjct: 520 VLHGETPRISVSFYHVKNNGKIELIKTFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFV 579

Query: 288 DLQSNATERLTNTL-FINISASYSPDSSQIV 317
           D        +       ++   + P    IV
Sbjct: 580 DTSDCTMMNIAEHYTASDVE--WDPTGRYIV 608


>gi|294816555|ref|ZP_06775197.1| 40-residue YVTN family beta-propeller repeat protein [Streptomyces
           clavuligerus ATCC 27064]
 gi|326445476|ref|ZP_08220210.1| 40-residue YVTN family beta-propeller repeat-containing protein
           [Streptomyces clavuligerus ATCC 27064]
 gi|294321370|gb|EFG03505.1| 40-residue YVTN family beta-propeller repeat protein [Streptomyces
           clavuligerus ATCC 27064]
          Length = 474

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/193 (13%), Positives = 63/193 (32%), Gaps = 16/193 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  ++ Y +  +   + V    T    A   +    + I     + +G RA +     
Sbjct: 92  SPDGGRL-YVSNGNAGTVSVVDTATGTVIATVPVTGSPNGI---AVTPDGSRAYVVTS-- 145

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
               +  +D  +N    +T T+ +  +    + SPD ++    +  +    + V+ +  +
Sbjct: 146 GNSRLTVIDTAANT---VTTTIAVGSAPQQVAVSPDGARAYVTNYND--RSVSVVDTATN 200

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                + D         ++P     A+         + +     +    +         T
Sbjct: 201 TVTG-TIDVRGFPQGVAFTPDSGR-AYVTRPYSNSVVAINTATNAVSANIPLTDRPYGVT 258

Query: 397 WSPSGRSLIFSRK 409
            SP G  +  SR 
Sbjct: 259 ASPDGTRVYVSRH 271



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/217 (14%), Positives = 68/217 (31%), Gaps = 11/217 (5%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+  + AY        L V             +G+    +     S +G RA ++   D 
Sbjct: 135 PDGSR-AYVVTSGNSRLTVIDTAANTVTTTIAVGSAPQQV---AVSPDGARAYVTNYNDR 190

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           ++    VD  +N      +        +++PDS +      R     +  + +  +    
Sbjct: 191 SVS--VVDTATNTVTGTIDVRGFPQGVAFTPDSGRAYVT--RPYSNSVVAINTATNAVSA 246

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                +  Y     SP G  +  ++  G   A      +      L  ++  +    +P 
Sbjct: 247 NIPLTDRPYGVTA-SPDGTRVYVSRHWGATVATIATATNTVSATALAGNTPGEV-AVTPD 304

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           G  + ++   +  T S + +         +  TPA  
Sbjct: 305 GGHV-YATNGNSATVSVIDTATGTTNAIPVGVTPADV 340


>gi|304312315|ref|YP_003811913.1| Curli production assembly/transport component CsgG [gamma
           proteobacterium HdN1]
 gi|301798048|emb|CBL46270.1| Curli production assembly/transport component CsgG [gamma
           proteobacterium HdN1]
          Length = 320

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 18/102 (17%)

Query: 58  IDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVI 117
            D +G + S++++  L  +  F L+ +     KI +  +I   +  + +GA  L+ G V 
Sbjct: 78  GDRVGKQASDILAARLAETGKFILLERADL-DKIKDEAAIANLKQ-SQVGADYLIIGSVS 135

Query: 118 KEG----------------KDRLRVEFRLWDVKDRKQIIGKK 143
           + G                + R RV  RL +V   + I  ++
Sbjct: 136 EYGREAVSETGVFSRNKKQQARARVNVRLVEVSTGQIIYSEE 177


>gi|294778300|ref|ZP_06743726.1| putative prolyl dipeptidyl peptidase [Bacteroides vulgatus PC510]
 gi|294447928|gb|EFG16502.1| putative prolyl dipeptidyl peptidase [Bacteroides vulgatus PC510]
          Length = 733

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 66/179 (36%), Gaps = 35/179 (19%)

Query: 220 SPNQQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---- 274
           S + +K+  Y+    ++   ++ ++T  D + K   +F   I+    S + K  LI    
Sbjct: 53  SADGKKIIQYSFKTGKETGTIFDVNTARDCSIK---SFDDYIM----SPDEKLILIQTET 105

Query: 275 --SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               ++    + Y  ++++N  E L +         +SPD +QI F  D        V  
Sbjct: 106 KPIYRRSFTANYYIFNVKNNKMEPL-SENGPQQVPLFSPDGNQIAFVRD---NNIYLVKL 161

Query: 333 SNGSDQKRISQDK-----------------EASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             G+ + ++++D                          +S    ++A+ +F   +  + 
Sbjct: 162 LFGNSESQVTKDGKFNEVLNGIPDWVYEEEFGFNRAFDFSADSQMLAYIRFDESQVPMY 220



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 23/147 (15%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------ 363
           S D  +I+  S + GKE   +   N +    I      S+ D + SP   LI        
Sbjct: 53  SADGKKIIQYSFKTGKETGTIFDVNTARDCSIK-----SFDDYIMSPDEKLILIQTETKP 107

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID- 422
                      +     ++   L E+   Q P +SP G  + F R       + +Y +  
Sbjct: 108 IYRRSFTANYYIFNVKNNKMEPLSENGPQQVPLFSPDGNQIAFVRD------NNIYLVKL 161

Query: 423 LNGRNETLINTPAYASD-----PQWVG 444
           L G +E+ +      ++     P WV 
Sbjct: 162 LFGNSESQVTKDGKFNEVLNGIPDWVY 188



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 36/169 (21%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD---- 321
           S++GK+ +    K         D+ +      +   F +     SPD   I+ +++    
Sbjct: 53  SADGKKIIQYSFKTGKETGTIFDVNT--ARDCSIKSFDDY--IMSPDEKLILIQTETKPI 108

Query: 322 --REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             R      Y+     +  + +S++       P++SP G+ IAF + +     I ++K  
Sbjct: 109 YRRSFTANYYIFNVKNNKMEPLSENGPQQV--PLFSPDGNQIAFVRDN----NIYLVKLL 162

Query: 380 -GSQERLLVEDSNLQA-----PTW--------------SPSGRSLIFSR 408
            G+ E  + +D          P W              S   + L + R
Sbjct: 163 FGNSESQVTKDGKFNEVLNGIPDWVYEEEFGFNRAFDFSADSQMLAYIR 211


>gi|254882721|ref|ZP_05255431.1| dipeptidyl peptidase IV [Bacteroides sp. 4_3_47FAA]
 gi|319643973|ref|ZP_07998548.1| dipeptidyl peptidase IV [Bacteroides sp. 3_1_40A]
 gi|254835514|gb|EET15823.1| dipeptidyl peptidase IV [Bacteroides sp. 4_3_47FAA]
 gi|317384497|gb|EFV65464.1| dipeptidyl peptidase IV [Bacteroides sp. 3_1_40A]
          Length = 733

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 66/179 (36%), Gaps = 35/179 (19%)

Query: 220 SPNQQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---- 274
           S + +K+  Y+    ++   ++ ++T  D + K   +F   I+    S + K  LI    
Sbjct: 53  SADGKKIIQYSFKTGKETGTIFDVNTARDCSIK---SFDDYIM----SPDEKLILIQTET 105

Query: 275 --SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               ++    + Y  ++++N  E L +         +SPD +QI F  D        V  
Sbjct: 106 KPIYRRSFTANYYIFNVKNNKMEPL-SENGPQQVPLFSPDGNQIAFVRD---NNIYLVKL 161

Query: 333 SNGSDQKRISQDK-----------------EASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             G+ + ++++D                          +S    ++A+ +F   +  + 
Sbjct: 162 LFGNSESQVTKDGKFNEVLNGIPDWVYEEEFGFNRAFDFSADSQMLAYIRFDESQVPMY 220



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 23/147 (15%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------ 363
           S D  +I+  S + GKE   +   N +    I      S+ D + SP   LI        
Sbjct: 53  SADGKKIIQYSFKTGKETGTIFDVNTARDCSIK-----SFDDYIMSPDEKLILIQTETKP 107

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID- 422
                      +     ++   L E+   Q P +SP G  + F R       + +Y +  
Sbjct: 108 IYRRSFTANYYIFNVKNNKMEPLSENGPQQVPLFSPDGNQIAFVRD------NNIYLVKL 161

Query: 423 LNGRNETLINTPAYASD-----PQWVG 444
           L G +E+ +      ++     P WV 
Sbjct: 162 LFGNSESQVTKDGKFNEVLNGIPDWVY 188



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 36/169 (21%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD---- 321
           S++GK+ +    K         D+ +      +   F +     SPD   I+ +++    
Sbjct: 53  SADGKKIIQYSFKTGKETGTIFDVNT--ARDCSIKSFDDY--IMSPDEKLILIQTETKPI 108

Query: 322 --REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             R      Y+     +  + +S++       P++SP G+ IAF + +     I ++K  
Sbjct: 109 YRRSFTANYYIFNVKNNKMEPLSENGPQQV--PLFSPDGNQIAFVRDN----NIYLVKLL 162

Query: 380 -GSQERLLVEDSNLQA-----PTW--------------SPSGRSLIFSR 408
            G+ E  + +D          P W              S   + L + R
Sbjct: 163 FGNSESQVTKDGKFNEVLNGIPDWVYEEEFGFNRAFDFSADSQMLAYIR 211



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 81/233 (34%), Gaps = 8/233 (3%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y+      G  NS++   +  + S + +     +D DG   R      +  L     + +
Sbjct: 242 YEYKYPMPGINNSKVTVHTFDIKSKVTRKMNLPLDADGYIPRIKFTDDENALAIMTLNRH 301

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           Q +      +    L   ++     +  K    + +++  P      K  ++  +KD   
Sbjct: 302 QNRFDLYFANPRSTLCKLMVRDEAPQYIKEEA-YSNIVFYP------KNFVVMSEKDGYN 354

Query: 283 DIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            +Y      N  +++T   F +     +   ++   FES+     +  + + +G  +K  
Sbjct: 355 HLYLYTSGGNLVKQITKGNFEVKDFLGWDEATNTFYFESNEGSPLRTAIYKVDGKGKKTK 414

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              +E ++     +     I           I +   +G +   LV+++ L+ 
Sbjct: 415 LSKQEGTHKAIFSNNMKYYINTFSNINTPPVITLNDNNGKELATLVDNNTLKH 467


>gi|158253545|gb|AAI54185.1| Excision repair cross-complementing rodent repair deficiency,
           complementation group 8 [Danio rerio]
          Length = 400

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 64/193 (33%), Gaps = 15/193 (7%)

Query: 111 LVTGRVI-KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           ++ GR +   G D + V + L +   + Q   K   +   S R + H  S +  Q    +
Sbjct: 53  VIDGRYMLSGGSDGVIVIYDLENNSKKPQYTCKAICTVGRSSRHV-HKFSVETVQWYPHD 111

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            G F S     +  V              DG             ++    SP  +K +  
Sbjct: 112 TGMFVSSSFDKTMKVWDAETLKPADEFQFDG------------NVYCHHMSPIARKHSLV 159

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
               +D  +V L D +       +   R  IL+ R+S   +  L +   D  + I+ V  
Sbjct: 160 AVGTKDP-KVQLCDLKSGSRIHILQGHRGEILSVRWSPRYEHILATASTDSRVRIWDVRR 218

Query: 290 QSNATERLTNTLF 302
            S +   L     
Sbjct: 219 ASGSLFTLDQHNG 231


>gi|150004541|ref|YP_001299285.1| dipeptidyl peptidase IV [Bacteroides vulgatus ATCC 8482]
 gi|149932965|gb|ABR39663.1| dipeptidyl peptidase IV [Bacteroides vulgatus ATCC 8482]
          Length = 733

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 66/179 (36%), Gaps = 35/179 (19%)

Query: 220 SPNQQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---- 274
           S + +K+  Y+    ++   ++ ++T  D + K   +F   I+    S + K  LI    
Sbjct: 53  SADGKKIIQYSFKTGKETGTIFDVNTARDCSIK---SFDDYIM----SPDEKLILIQTET 105

Query: 275 --SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               ++    + Y  ++++N  E L +         +SPD +QI F  D        V  
Sbjct: 106 KPIYRRSFTANYYIFNVKNNKMEPL-SENGPQQVPLFSPDGNQIAFVRD---NNIYLVKL 161

Query: 333 SNGSDQKRISQDK-----------------EASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             G+ + ++++D                          +S    ++A+ +F   +  + 
Sbjct: 162 LFGNSESQVTKDGKFNEVLNGIPDWVYEEEFGFNRAFDFSADSQMLAYIRFDESQVPMY 220



 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 23/147 (15%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------ 363
           S D  +I+  S + GKE   +   N +    I      S+ D + SP   LI        
Sbjct: 53  SADGKKIIQYSFKTGKETGTIFDVNTARDCSIK-----SFDDYIMSPDEKLILIQTETKP 107

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID- 422
                      +     ++   L E+   Q P +SP G  + F R       + +Y +  
Sbjct: 108 IYRRSFTANYYIFNVKNNKMEPLSENGPQQVPLFSPDGNQIAFVRD------NNIYLVKL 161

Query: 423 LNGRNETLINTPAYASD-----PQWVG 444
           L G +E+ +      ++     P WV 
Sbjct: 162 LFGNSESQVTKDGKFNEVLNGIPDWVY 188



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 36/169 (21%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD---- 321
           S++GK+ +    K         D+ +      +   F +     SPD   I+ +++    
Sbjct: 53  SADGKKIIQYSFKTGKETGTIFDVNT--ARDCSIKSFDDY--IMSPDEKLILIQTETKPI 108

Query: 322 --REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             R      Y+     +  + +S++       P++SP G+ IAF + +     I ++K  
Sbjct: 109 YRRSFTANYYIFNVKNNKMEPLSENGPQQV--PLFSPDGNQIAFVRDN----NIYLVKLL 162

Query: 380 -GSQERLLVEDSNLQA-----PTW--------------SPSGRSLIFSR 408
            G+ E  + +D          P W              S   + L + R
Sbjct: 163 FGNSESQVTKDGKFNEVLNGIPDWVYEEEFGFNRAFDFSADSQMLAYIR 211



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 81/233 (34%), Gaps = 8/233 (3%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y+      G  NS++   +  + S + +     +D DG   R      +  L     + +
Sbjct: 242 YEYKYPMPGIDNSKVTVHTFDIKSKVTRKMDLPLDADGYIPRIKFTDDENALAITTLNRH 301

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           Q +      +    L   ++     +  K    + +++  P      K  ++  +KD   
Sbjct: 302 QNRFDLYFANPRSTLCKLMVRDEAPQYIKEEA-YSNIVFYP------KNFVVMSEKDGYN 354

Query: 283 DIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            +Y      N  +++T   F +     +   ++   FES+     +  + + +G  +K  
Sbjct: 355 HLYLYTSGGNLVKQITKGNFEVKDFLGWDEATNTFYFESNEGSPLRTAIYKVDGKGKKTK 414

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              +E ++     +     I           I +   +G +   LV+++ L+ 
Sbjct: 415 LSKQEGTHKAIFSNNMKYYINTFSNINTPPVITLNDNNGKELATLVDNNTLKH 467


>gi|54400470|ref|NP_001005984.1| DNA excision repair protein ERCC-8 [Danio rerio]
 gi|53734012|gb|AAH83423.1| Excision repair cross-complementing rodent repair deficiency,
           complementation group 8 [Danio rerio]
 gi|182892104|gb|AAI65832.1| Ercc8 protein [Danio rerio]
          Length = 400

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 64/193 (33%), Gaps = 15/193 (7%)

Query: 111 LVTGRVI-KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           ++ GR +   G D + V + L +   + Q   K   +   S R + H  S +  Q    +
Sbjct: 53  VIDGRYMLSGGSDGVIVIYDLENNSKKPQYTCKAICTVGRSSRHV-HKFSVETVQWYPHD 111

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            G F S     +  V              DG             ++    SP  +K +  
Sbjct: 112 TGMFVSSSFDKTMKVWDAETLKPADEFQFDG------------NVYCHHMSPIARKHSLV 159

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
               +D  +V L D +       +   R  IL+ R+S   +  L +   D  + I+ V  
Sbjct: 160 AVGTKDP-KVQLCDLKSGSRIHILQGHRGEILSVRWSPRYEHILATASTDSRVRIWDVRR 218

Query: 290 QSNATERLTNTLF 302
            S +   L     
Sbjct: 219 ASGSLFTLDQHNG 231


>gi|329939361|ref|ZP_08288697.1| peptide hydrolase [Streptomyces griseoaurantiacus M045]
 gi|329301590|gb|EGG45484.1| peptide hydrolase [Streptomyces griseoaurantiacus M045]
          Length = 596

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 92/275 (33%), Gaps = 23/275 (8%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           R LFVS +  +      L   DR     R +T   +    +   SP+ + + +    D D
Sbjct: 25  RALFVSNATGT----YELYAWDRSTGEQRQVTDRPNG-TTDGVLSPDGEWIWWFDDTDGD 79

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS------NGKRALISVQKDEAMDIYSVDL 289
              V+       +A +      +  LA  + +      +G+ A++    DE      +  
Sbjct: 80  EFGVWRRQPFAGKASEGADEEAAPGLAASYPAGLALGRDGRTAVVGRSTDEDGTTLHLAR 139

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKE 346
                  +            S D + +  E    G      L V++ +G     +   + 
Sbjct: 140 AGEEPVEIYRHRESAGVGDLSHDGTLLAIEHTEHGDAMHSALRVLRLDGGTVAELDDTEG 199

Query: 347 ASYFDPV----WSP-QGD-LIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSP 399
            +    +    ++P +GD  +        ++   V      +E  L  E     A  W P
Sbjct: 200 GTVELGLEVLGFAPVEGDARLLIGHQRRGRWEPLVWDVATGEETDLALELPGDVAAEWYP 259

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            G +L+ S     +  S+L+      R  T ++TP
Sbjct: 260 DGSALLVS--HSFEARSELFRYTFADRTLTELSTP 292



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 57/178 (32%), Gaps = 10/178 (5%)

Query: 260 ILAPRFSSNG-KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +  P ++ +   RAL         ++Y+ D  +    ++T+          SPD   I +
Sbjct: 13  VSLPDWAEDAPNRALFVSNATGTYELYAWDRSTGEQRQVTDRPNGTTDGVLSPDGEWIWW 72

Query: 319 ESDREG------KEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGD-LIAFTKFSGEK 370
             D +G      + Q +  +++    +  +    ASY         G   +       + 
Sbjct: 73  FDDTDGDEFGVWRRQPFAGKASEGADEEAAPGLAASYPAGLALGRDGRTAVVGRSTDEDG 132

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRN 427
             + + +       +     +      S  G  L     + GD   S L  + L+G  
Sbjct: 133 TTLHLARAGEEPVEIYRHRESAGVGDLSHDGTLLAIEHTEHGDAMHSALRVLRLDGGT 190



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 63/230 (27%), Gaps = 15/230 (6%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP----RFSP-NQQKVAY 228
           +  +L +  +     + ++L V+  DG  +  L  +    +        F+P        
Sbjct: 162 DGTLLAIEHTEHGDAMHSALRVLRLDGGTVAELDDTEGGTVELGLEVLGFAPVEGDARLL 221

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +         + D                + A  +  +G   L+S   +   +++   
Sbjct: 222 IGHQRRGRWEPLVWDVATGEETDLALELPGDV-AAEWYPDGSALLVSHSFEARSELFRYT 280

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                   L+        A+  PD S     S       +       S   R+  D    
Sbjct: 281 FADRTLTELSTPPGTVSGATARPDGSVEYLWSSAAEPPAVR------STTGRVVLDPPG- 333

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
              P   P  D   + +  G +    V K  G+   L         PTW 
Sbjct: 334 MKAPASVPVED--VWVEGPGGRVHALVQKPAGASGPLPTVFDIHGGPTWH 381



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 37/260 (14%), Positives = 76/260 (29%), Gaps = 24/260 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +    R   +  P ++ +    A    +      +Y  D R     +++ +  +      
Sbjct: 4   WEMRFRAARVSLPDWAEDAPNRALFVSNATGTYELYAWD-RSTGEQRQVTDRPNGTTDGV 62

Query: 265 FSSNGKRALISVQKDEAMDIY--SVDLQSNATERLTNTLFINISASYSP------DSSQI 316
            S +G+        D               A+E         ++ASY        D    
Sbjct: 63  LSPDGEWIWWFDDTDGDEFGVWRRQPFAGKASEGADEEAAPGLAASYPAGLALGRDGRTA 122

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAI 373
           V     +       +   G +   I + +E S      S  G L+A            A+
Sbjct: 123 VVGRSTDEDGTTLHLARAGEEPVEIYRHRE-SAGVGDLSHDGTLLAIEHTEHGDAMHSAL 181

Query: 374 GVMKKDGSQERLL--VEDSNL----QAPTWSP---SGRSLIFSRKKDGDTGSKLYSIDLN 424
            V++ DG     L   E   +    +   ++P     R LI   ++ G     ++ +   
Sbjct: 182 RVLRLDGGTVAELDDTEGGTVELGLEVLGFAPVEGDARLLI-GHQRRGRWEPLVWDVATG 240

Query: 425 GRNETLINTPAYASDPQWVG 444
              +  +  P   +  +W  
Sbjct: 241 EETDLALELPGDVAA-EWYP 259


>gi|326777786|ref|ZP_08237051.1| putative peptidase [Streptomyces cf. griseus XylebKG-1]
 gi|326658119|gb|EGE42965.1| putative peptidase [Streptomyces cf. griseus XylebKG-1]
          Length = 613

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 57/176 (32%), Gaps = 10/176 (5%)

Query: 260 ILAPRFS---SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +  P ++    +  R+L         ++Y+ D  S    ++T+          +PD   +
Sbjct: 20  VSLPDWAEDAPD--RSLFVSNATGTYELYAWDRASGRQRQVTDRPNGTTDGVLTPDGEAV 77

Query: 317 VFESDREGKEQLYVM--QSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAI 373
            + SD +G E    M     G D +  +     SY         G  +       +   I
Sbjct: 78  WWFSDTDGDEFGVWMRQPFGGGDDEPAAPGLAPSYPAGLAIGRDGSAVIGRSTDEDGTTI 137

Query: 374 GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRN 427
            ++ + G +   +     +      S  G  +     + GD   S L  +  +G  
Sbjct: 138 HLVPEPGGEPVEIYRHRESAGVGDLSHDGTLIALEHTEHGDAMHSSLRVVRPDGST 193


>gi|284167418|ref|YP_003405696.1| 6-phosphogluconolactonase [Haloterrigena turkmenica DSM 5511]
 gi|284017073|gb|ADB63023.1| 6-phosphogluconolactonase [Haloterrigena turkmenica DSM 5511]
          Length = 348

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/303 (15%), Positives = 91/303 (30%), Gaps = 56/303 (18%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +++    + G F+     V  +         L V    G  I  L    D  +  P    
Sbjct: 81  LHEVNAAQSGAFSPCHCSVDSTG------RFLFVAHYFGGAISMLPIDDDGSIESPT--- 131

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
                              +         +R        + P    + +   ++    + 
Sbjct: 132 -----------------AVIDHHGSSVHDERQNAPHPHSITPG--PDDQFVYVADLGTDQ 172

Query: 282 MDIYSVDLQSNATERLTNTLFINISA-------SYSPDSSQIVFESDREGKEQLYVMQSN 334
           +  Y +D      ER   T   N+         ++ P+  Q+   ++ +     +  +S+
Sbjct: 173 IITYRIDRDQQTLERCAET---NVEPGSGPRHIAFGPNGDQLYVINELDSTVTQFDRRSD 229

Query: 335 GSDQKRIS-------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           GS   +++          +    +    P G  I F    G+   +     DG  ER+  
Sbjct: 230 GSLVAQVTVSTLPNEFYGQNKSAEIAVHPSGRYI-FASNRGQDAIVTFAIDDGRLERVAT 288

Query: 388 EDSNLQAPTWS----PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP--- 440
             S  + P W     P+G  L F+  +  D  +  + +D    +   I       DP   
Sbjct: 289 SSSGGEWP-WHFTVDPNGDYL-FAANRHSDDVTG-FRVDGETGSLVPIGEHVSIPDPVCI 345

Query: 441 QWV 443
           QW+
Sbjct: 346 QWL 348


>gi|330890808|gb|EGH23469.1| hypothetical protein PSYMO_19198 [Pseudomonas syringae pv. mori
           str. 301020]
          Length = 377

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 70/188 (37%), Gaps = 30/188 (15%)

Query: 260 ILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              PR   FSS+GK   +  +    +  ++++ ++ A ++      I    + +P  ++ 
Sbjct: 199 NTGPRHLAFSSDGKFLYVVGEMSGTVTAFAINQKTGALKQTGEADGIPKRLNLAPGQARD 258

Query: 317 VFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              +D   +   +++                         +P G  +  ++ +    ++ 
Sbjct: 259 ARNNDLKDDTTPRIWAADI-------------------RLAPNGKWLFISERTTSSVSVF 299

Query: 375 VMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            ++    +   +    V++   +    SP+GR L+ S +K    GS  Y+I  NG  + +
Sbjct: 300 KVEPASGKVTFVENYPVQEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIAANGALQRV 357

Query: 431 INTPAYAS 438
              P+   
Sbjct: 358 SEAPSGKG 365


>gi|297828095|ref|XP_002881930.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297327769|gb|EFH58189.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 343

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 80/251 (31%), Gaps = 24/251 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S   +  L  +  D  N   +       + +  ++ +  ++  A+ D      V   D 
Sbjct: 71  GSHDREIFLWRVHGDCKN-FMVLKGHKNAILDLHWTSDGSQIVSASPDK----TVRAWDV 125

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  K++    S + +   +  G   +IS   D    ++  D++     +     +  
Sbjct: 126 ETGKQIKKMAEHSSFVNSCCPTRRGPPLVISGSDDGTAKLW--DMRQRGAIQTFPDKYQI 183

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + S+S D++  +F    +    + V      +     +  + +      SP G  +  T
Sbjct: 184 TAVSFS-DAADKIFTGGVD--NDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLL-T 239

Query: 365 KFSGEKFAIGVMKKDGSQER--LLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGS 416
                K  +  M+    Q R   + +             +WSP G  +       G +  
Sbjct: 240 NGMDNKLCVWDMRPYAPQNRCVKIFDGHQHNFEKNLLKCSWSPDGTKV-----TAGSSDR 294

Query: 417 KLYSIDLNGRN 427
            ++  D   R 
Sbjct: 295 MVHIWDTTSRR 305


>gi|284044803|ref|YP_003395143.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Conexibacter woesei DSM 14684]
 gi|283949024|gb|ADB51768.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Conexibacter woesei DSM 14684]
          Length = 716

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/297 (14%), Positives = 80/297 (26%), Gaps = 87/297 (29%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQ 277
           SP+ ++VA+A            +       P  + +       PRFS +G R       +
Sbjct: 14  SPDGRRVAFALGSQ------VWLGEVGGAPPCAVADGPGRAALPRFSPDGTRLAFLADRE 67

Query: 278 KDEAMDIYSVDLQ------------------------------------SNATERLTNTL 301
           +     ++ +D++                                    + A   + +  
Sbjct: 68  RPGMAGVHVLDVEAALGGAGAGGGGAARGAADSAAAAGRGGGAALGGAGAAAPRAVGDLA 127

Query: 302 FINISASYSPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYF------ 350
                  +S D ++++       SDR G      +   G  +  +     A++       
Sbjct: 128 ASVEQLRWSRDGTRLLVLAADPGSDRAGAHGATRIAGGGEGEGPLVLRPRAAWRRLWLLD 187

Query: 351 --------DPVWSPQGDLIAFTKFSGE-----------------KFAIGVMKKDGSQERL 385
                        P G  +    ++G                     + ++  D    RL
Sbjct: 188 ASDGAGAAAHEAGPDGLTVWEVGWAGAGAAVAIVSEDPSESGWYGARVALLDLDARTARL 247

Query: 386 LVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           + E    LQ+P  SP GR + F      D         + G    L        DP 
Sbjct: 248 VHEPAWQLQSPVISPDGRRVAFVEGIASDRTE------VAGSARVLDLASGAVGDPA 298


>gi|311746197|ref|ZP_07719982.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1]
 gi|126576424|gb|EAZ80702.1| putative outer membrane protein, OmpA family [Algoriphagus sp. PR1]
          Length = 640

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 83/255 (32%), Gaps = 34/255 (13%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA-- 229
           DF   + +V        ++N L               ++ Q+ + P  + + +++ +   
Sbjct: 137 DFKKTVYYVQMKEQMDFLENQLGQAKAITKEKLDEPINQFQLQYFPVLTADGEQILFTKR 196

Query: 230 ----TYDDEDILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALISV----QK 278
                +D EDI   YL        P  I    N +        +++G   + +       
Sbjct: 197 DGTGNFDKEDIFTSYLEPDGTWTPPVGIASTINSQYNEGTCSVTADGNILIYTSCDAPDS 256

Query: 279 DEAMDIYSVDLQSNATERL------TNTLFINISASYSPDSSQIVFESDRE---GKEQLY 329
             + D+Y     +   +R        N+   +   S S D   + F S+R    G   ++
Sbjct: 257 QGSCDLYIAYKTNGIWQRPKNMGKEVNSRSWDSQPSLSADGRILFFSSNRRGGFGGNDIW 316

Query: 330 --VMQSNGSDQKRISQDKEASYFDPVWSP---QGDLIAF----TKFSGEKFAIGVMKKDG 380
             V Q +GS  +  +  +  +      SP     + I F             I + + +G
Sbjct: 317 YSVRQEDGSWSEAQNLGEPVNTAKDEVSPFMFFNNEILFFASEGHQGFGGMDIFLSRVEG 376

Query: 381 SQERLLVEDSNLQAP 395
            +     E  NL  P
Sbjct: 377 GEF---TEPENLGLP 388



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 65/195 (33%), Gaps = 35/195 (17%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--------NTLFINISASYS 310
               P F ++ K+ +  VQ  E MD     L     + +T        N   +      +
Sbjct: 128 QNSDPLFDADFKKTVYYVQMKEQMDFLENQL--GQAKAITKEKLDEPINQFQLQYFPVLT 185

Query: 311 PDSSQIVFESDREGKEQL-------YVMQSNGSDQKRI----SQDKEASYFDPVWSPQGD 359
            D  QI+F   R+G             ++ +G+    +    + + + +      +  G+
Sbjct: 186 ADGEQILFT-KRDGTGNFDKEDIFTSYLEPDGTWTPPVGIASTINSQYNEGTCSVTADGN 244

Query: 360 LIAFTK----FSGEKFAIGVMKKDGSQERL-------LVEDSNLQAPTWSPSGRSLIFSR 408
           ++ +T      S     + +  K     +        +   S    P+ S  GR L FS 
Sbjct: 245 ILIYTSCDAPDSQGSCDLYIAYKTNGIWQRPKNMGKEVNSRSWDSQPSLSADGRILFFSS 304

Query: 409 KKDGDTGSK--LYSI 421
            + G  G     YS+
Sbjct: 305 NRRGGFGGNDIWYSV 319


>gi|24654584|ref|NP_611261.1| CG10931 [Drosophila melanogaster]
 gi|21627071|gb|AAF57798.2| CG10931 [Drosophila melanogaster]
 gi|92109918|gb|ABE73283.1| IP10415p [Drosophila melanogaster]
          Length = 345

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 72/211 (34%), Gaps = 20/211 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  I++        +   +FS N + +  ++ D      + L D    R  + +      
Sbjct: 45  GYAIKHSLLGHSGCVTGLKFSSNGENLVSSSGDR----LLKLWDLSATRCIQSLAGHGDG 100

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVF 318
           +    +S+ G   + S   D  + ++  D +S    + L      + S  ++P ++ +  
Sbjct: 101 VNDVAWSAAG--LIASCSDDMTVRLW--DARSKLCVKVLEGHSRYSFSCCFNPQANLLAS 156

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     E + +         +I    +       +   G++   + + G    + +   
Sbjct: 157 TSF---DETVRLWDVRTGKTLKIVHAHQDPITSVDFHRDGNIFVTSSYDG---LVRLWDS 210

Query: 379 DGSQERLLVEDSNLQAPT----WSPSGRSLI 405
                   + D +   P     +SP+GR ++
Sbjct: 211 STGHVLKTLVDVD-NIPVGYVKFSPNGRYIL 240


>gi|46125961|ref|XP_387534.1| hypothetical protein FG07358.1 [Gibberella zeae PH-1]
          Length = 770

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/300 (14%), Positives = 104/300 (34%), Gaps = 62/300 (20%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP---RFSPNQQKVAYATYDDEDILR 238
           E+    + + ++   D DG +++       +  F+      SP+++ V    Y      +
Sbjct: 233 ENGTCHVKEFNIWYKDDDGQDVQLSKDGTKENRFDKGRIYLSPDKKYVVAWQYTPAQDHK 292

Query: 239 VYLMDT--------------------RIDRAPKRIGNFRSMILAPR-------------- 264
           + L+++                    R+     R+ + +S    P               
Sbjct: 293 INLVESSPKDQIEPKLHTKKYLKPGDRVRIDRPRLFDLKSRNEVPTDNMLFKNPYSLNHL 352

Query: 265 -FSSNGKRALISVQKDEAMDIYSVDLQ-SNATERL---TNTLFINISASYSP---DSSQI 316
            +  +    L         ++  + +        +   T+  F++ + +Y     +S ++
Sbjct: 353 KWKEDNAEYLFYFNGRGHQNVRVIGIGVDGNVRVIVEETSNTFVDYTKTYYKFLKESDEL 412

Query: 317 VFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAF------TKFSGE 369
           ++ S+R+G   LY++  + G+ + +I++                 I F            
Sbjct: 413 LWTSERDGYNHLYLVDMATGTIKTQITKGSWMVNAIEFVDKDARQIWFQAYGLKDSEDPY 472

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSRK--------KDGDTGSKLY 419
              +  +  DGS  ++L E +   + T SP  R L   +SR         +DG++G ++ 
Sbjct: 473 HGHLARVNFDGSDFKILTEGNGTHSWTLSPDKRYLTDTWSRVDFPPTTVLRDGESGEQIM 532


>gi|318040505|ref|ZP_07972461.1| hypothetical protein SCB01_02316 [Synechococcus sp. CB0101]
          Length = 167

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 43/119 (36%), Gaps = 5/119 (4%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTK 365
            + S D   +    DR G+  + +       +  +   +    +  P  S  G  +A   
Sbjct: 27  PALSGDGRLLASLVDRGGRTTVLLQDRRSGRELLLRHLRNRQPHSAPSLSWNGRYLALLV 86

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW---SPSGRSLIFSRKKDGDTGSKLYSI 421
             G +    +  +   Q+  L   +  + P W   +P G+S+     + G    +++S+
Sbjct: 87  QQGGRRQAVIEDRATGQQHPLWLPAGQE-PQWLSLAPDGQSIALELIQGGSRKIQVFSL 144



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 44/125 (35%), Gaps = 9/125 (7%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--KRIGNFRSMILAPRFSSNGKRAL 273
           +P  S + + +A +  D      V L D R  R    + + N +    AP  S NG+   
Sbjct: 26  QPALSGDGRLLA-SLVDRGGRTTVLLQDRRSGRELLLRHLRNRQPH-SAPSLSWNGRYLA 83

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFESDREGKEQLYV 330
           + VQ+         D  +     L   L       +   +PD   I  E  + G  ++ V
Sbjct: 84  LLVQQGGRRQAVIEDRATGQQHPL--WLPAGQEPQWLSLAPDGQSIALELIQGGSRKIQV 141

Query: 331 MQSNG 335
               G
Sbjct: 142 FSLAG 146


>gi|182413641|ref|YP_001818707.1| WD40 domain-containing protein [Opitutus terrae PB90-1]
 gi|177840855|gb|ACB75107.1| WD40 domain protein beta Propeller [Opitutus terrae PB90-1]
          Length = 309

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 71/238 (29%), Gaps = 37/238 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----RFSSNGKRA 272
            FSP+  +V + +           +        +  G +     +P       S +G+RA
Sbjct: 54  SFSPDGTEVFWFSNRPPGPDNPEWLAFFRWMRLEH-GRWTGPQASPFPGTVALSPDGRRA 112

Query: 273 LISVQKDEAMDIYSVDLQSNATERL-TNTLFINIS----ASYSPDSSQIVFESDRE---- 323
               Q D        D +      L     F ++      S S   + + F +       
Sbjct: 113 YFDSQNDLWTAEKR-DGRWGEPRALGIVARFPDLKSLHLPSVSATGT-LYFIAQAPALGV 170

Query: 324 -GKEQLYVMQ-SNGSDQKRISQDKEASY-----FDPVWSPQGDLIAFTK------FSGEK 370
            G   +Y  +  +G+  K        +      + P  +P    + F+            
Sbjct: 171 RGNIGIYRSEFIDGAYAKPELLPDAINLPPFMNWAPCIAPDESFLLFSSNRRDASHDPGD 230

Query: 371 FAIGVMKKDGSQERLLV------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             + +   DG+    +              P  SP GR L F+R    D  + +Y ID
Sbjct: 231 LYLSLRCPDGTWAEPVSLGEPVNTPRQEVFPRLSPDGRYLFFARDTP-DRQNDIYWID 287



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 69/198 (34%), Gaps = 24/198 (12%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-- 261
           R+  P           SP+ ++  + + +D              RA   +  F  +    
Sbjct: 90  RWTGPQASPFPGTVALSPDGRRAYFDSQNDLWTAEKRDGRWGEPRALGIVARFPDLKSLH 149

Query: 262 APRFSSNGKRALI----SVQKDEAMDIYS---VDLQSNATERLTNT----LFINISASYS 310
            P  S+ G    I    ++     + IY    +D      E L +      F+N +   +
Sbjct: 150 LPSVSATGTLYFIAQAPALGVRGNIGIYRSEFIDGAYAKPELLPDAINLPPFMNWAPCIA 209

Query: 311 PDSSQIVFESDR------EGKEQLYVMQSNGSDQKRISQDKEASY----FDPVWSPQGDL 360
           PD S ++F S+R       G   L +   +G+  + +S  +  +       P  SP G  
Sbjct: 210 PDESFLLFSSNRRDASHDPGDLYLSLRCPDGTWAEPVSLGEPVNTPRQEVFPRLSPDGRY 269

Query: 361 IAFTKFSGEKFA-IGVMK 377
           + F + + ++   I  + 
Sbjct: 270 LFFARDTPDRQNDIYWID 287


>gi|154493612|ref|ZP_02032932.1| hypothetical protein PARMER_02952 [Parabacteroides merdae ATCC
           43184]
 gi|154086822|gb|EDN85867.1| hypothetical protein PARMER_02952 [Parabacteroides merdae ATCC
           43184]
          Length = 662

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 66/207 (31%), Gaps = 33/207 (15%)

Query: 160 DDIYQSITG-EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-------SRD 211
           D +Y + T   KG    +    + S ++G   N L ++ +D  N  +L P       + +
Sbjct: 175 DQLYFASTRAPKGAGKDKEE--TNSAITGQRNNDLFLVKQD-ENGAWLAPVELEDEVNTE 231

Query: 212 QILFEPRFSPNQQK--VAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILA--- 262
                P FS +       Y   D E      + +    +       R    +  + A   
Sbjct: 232 FDEGTPSFSKDGNTMYYTYCAQDPEGPRTSEIYISSRSSAKWGKGTRANIVKDSVTALGH 291

Query: 263 PRFSSNGKRALISVQ---KDEAMDIYSVDLQS---NATERL---TNTLFINISASYSPDS 313
           P  S +GK               D++   +      + E L    NT    +   Y  DS
Sbjct: 292 PSISPDGKYLYFVSDAVGGYGGKDLFRARVVGSDFGSMENLGPDINTPGDEMFP-YVRDS 350

Query: 314 SQIVFESDRE---GKEQLYVMQSNGSD 337
             + F SD     G   ++    + + 
Sbjct: 351 VTLYFASDGHPGMGGLDIFKATLDSTG 377



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 20/117 (17%)

Query: 344 DKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKD------GSQERLLVED-SN 391
           + E     P +S  G+ + +T             I +  +       G++  ++ +  + 
Sbjct: 229 NTEFDEGTPSFSKDGNTMYYTYCAQDPEGPRTSEIYISSRSSAKWGKGTRANIVKDSVTA 288

Query: 392 LQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRN----ETL---INTPAYASDP 440
           L  P+ SP G+ L F      G  G  L+   + G +    E L   INTP     P
Sbjct: 289 LGHPSISPDGKYLYFVSDAVGGYGGKDLFRARVVGSDFGSMENLGPDINTPGDEMFP 345



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 60/196 (30%), Gaps = 39/196 (19%)

Query: 262 APRFSSNGKRALISV-----QKDEAMDIYSVDLQSNATERLTNTLFINIS------ASYS 310
            P FS +G     +      +     +IY     S    + T    +  S       S S
Sbjct: 236 TPSFSKDGNTMYYTYCAQDPEGPRTSEIYISSRSSAKWGKGTRANIVKDSVTALGHPSIS 295

Query: 311 PDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           PD   + F SD  G      L+  +  GSD          +    + +P  ++  + + S
Sbjct: 296 PDGKYLYFVSDAVGGYGGKDLFRARVVGSD-----FGSMENLGPDINTPGDEMFPYVRDS 350

Query: 368 G------------EKFAIGVMKKDGSQERL-------LVEDSNLQAPTWSPSGRSLIFSR 408
                            I     D + +         +    +    T++ +  S  FS 
Sbjct: 351 VTLYFASDGHPGMGGLDIFKATLDSTGKWNVENMKAPINSSGDDFGITFAGNKESGFFSS 410

Query: 409 KKDGDTGSK-LYSIDL 423
            ++   G   LYS +L
Sbjct: 411 NRNDARGYDHLYSFEL 426


>gi|45190866|ref|NP_985120.1| AER263Cp [Ashbya gossypii ATCC 10895]
 gi|44983908|gb|AAS52944.1| AER263Cp [Ashbya gossypii ATCC 10895]
          Length = 513

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 62/154 (40%), Gaps = 19/154 (12%)

Query: 185 VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V+G    ++ + +   G+          +++    FSP+ + +  A++D+        + 
Sbjct: 373 VTGSDDFTMYLWNPLKGSKPILRMTGHQKLVNHVAFSPDGRYIVSASFDNS-------IK 425

Query: 244 TRIDRAPKRIGNFRSMILA---PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTN 299
               R  K I  FR  + +     +SS+  R L+S  KD  + ++  D+++      L  
Sbjct: 426 LWDGRDGKFIATFRGHVASVYQVAWSSD-CRLLVSCSKDTTLKVW--DVKTRKLTVDLPG 482

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                 +  +S D  ++       GK+++  + +
Sbjct: 483 HNDEVYTVDWSVDGKRVC----SGGKDKMVRLWT 512



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 38/302 (12%), Positives = 80/302 (26%), Gaps = 67/302 (22%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD------- 233
           S  +V+G   N+  + D D              +    +S + + +A  + D        
Sbjct: 154 SSRMVTGAGDNTARIWDCDTQTPLCTLKGHSNWVLCVAWSADGEVIATGSMDATIRLWDS 213

Query: 234 ---------------------------------------EDILRVYLMDTRIDRAPKRIG 254
                                                       + + DT        + 
Sbjct: 214 EKGQSLGDALRGHTKWITSLSWEPIHLVKPGEKPRLASASKDGTIKIWDTTRRVCIYTLS 273

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
              S +   ++   G+  L S   D  +  + +         L +        S S D  
Sbjct: 274 GHTSSVSCIKW--GGRNVLYSASHDRTVRCWDMAAGGKCINILKSHAHWVNHLSLSTD-- 329

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              +       +      ++  D +     +    ++ V    G +        + F + 
Sbjct: 330 ---YALRMGPFDHTGTKPASPEDAQ----ARALRNYEKVAKKNGTMEELMVTGSDDFTMY 382

Query: 375 VMKK-DGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +     GS+   R+      +    +SP GR ++       D   KL+    +GR+   I
Sbjct: 383 LWNPLKGSKPILRMTGHQKLVNHVAFSPDGRYIV---SASFDNSIKLW----DGRDGKFI 435

Query: 432 NT 433
            T
Sbjct: 436 AT 437


>gi|103488079|ref|YP_617640.1| dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein
           [Sphingopyxis alaskensis RB2256]
 gi|98978156|gb|ABF54307.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein
           [Sphingopyxis alaskensis RB2256]
          Length = 708

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 80/254 (31%), Gaps = 46/254 (18%)

Query: 195 VMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYD---------------DEDILR 238
           +  RD A I  +  S       P   SP+ +++A                          
Sbjct: 39  MTSRDLATISDIGRSSPFDTESPFSLSPDGRQIALMVRRGNPETNSFCQRLILVPRSGSG 98

Query: 239 VYLMDTRIDRAPKRIGNFRSM---------ILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            ++   R  +  + + + R++         I+ PR+S +G       +  +   ++ V  
Sbjct: 99  SHVELDRGGQFIRTLFDLRNLAAVRAGTAQIITPRWSPDGATIAYLKRVTDNTQVWIVPS 158

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                   T+  F     ++  D   ++      G+  L   ++   ++           
Sbjct: 159 TGGVARAATDLDFEVEDFAWGADGKNLI----VAGRPDLAKAEAMIDEE-----ASRGYL 209

Query: 350 FDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGS-----QERLLVEDSNLQAP----TWS 398
           FD  +SP           +    F + +   D       +  LL   ++   P     ++
Sbjct: 210 FDARFSPMMSDRPFPVGSYPTRYFHVALSDHDRRDASVEEIALLDPSASADRPPDAIRFA 269

Query: 399 PSGR-SLIFSRKKD 411
             GR ++ ++RK D
Sbjct: 270 ADGRGNVAWTRKLD 283



 Score = 39.6 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 21/138 (15%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S SPD  QI     R G  +     +N   Q+ I   +  S         G    F +  
Sbjct: 63  SLSPDGRQIALMVRR-GNPE-----TNSFCQRLILVPRSGSGSHVELDRGGQ---FIRTL 113

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            +   +  ++      +++        P WSP G ++ + ++   +T  +++ +   G  
Sbjct: 114 FDLRNLAAVRA--GTAQIIT-------PRWSPDGATIAYLKRVTDNT--QVWIVPSTGGV 162

Query: 428 ET-LINTPAYASDPQWVG 444
                +      D  W  
Sbjct: 163 ARAATDLDFEVEDFAWGA 180


>gi|298248764|ref|ZP_06972569.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297551423|gb|EFH85289.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 614

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 12/139 (8%)

Query: 251 KRIGNFRSMILAPRFS--------SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           + +  ++    AP  S         +  R LI+     +  ++S D+ +    +++    
Sbjct: 8   EPVNRWKQRFRAPTLSWSQVAAHAPD--RGLIASNLSGSYQLHSWDVSTGELRQVSYAPK 65

Query: 303 INISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                  S D   I +  D +G E  +   +   G   + ++ +    + DP  SP G +
Sbjct: 66  GVFIGRLSGDGRFIYYLQDEDGDEMGRFVRVPFTGGKPQELTPELPPYFADPYLSPTGTV 125

Query: 361 IAFTKFSGEKFAIGVMKKD 379
           + F     E   + V+   
Sbjct: 126 LGFLVGEPEGVDLYVVPLG 144



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 109/363 (30%), Gaps = 47/363 (12%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
            W+ + A     G +        ++    WDV   +    ++   +P         +S D
Sbjct: 23  SWSQVAAHAPDRGLIASNLSGSYQLHS--WDVSTGEL---RQVSYAPKGV--FIGRLSGD 75

Query: 162 --IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
                 +  E GD   R + V  +                G   + LTP       +P  
Sbjct: 76  GRFIYYLQDEDGDEMGRFVRVPFT----------------GGKPQELTPELPPYFADPYL 119

Query: 220 SPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFR----SMILAPRFSSNGKRAL 273
           SP    + +   + E  D+  V L       AP+R+ +              SS G  A+
Sbjct: 120 SPTGTVLGFLVGEPEGVDLYVVPLGPNDEVGAPRRVFHNPVPGLLGRRLLALSSAGTTAI 179

Query: 274 ISVQKDEAMDIY----SVDLQSNA-TERLTNTLFINIS-ASYSP--DSSQIVFESDREGK 325
           + + K      Y    ++DL +    ++L       ++   YSP     ++         
Sbjct: 180 M-ISKPHNPSTYGGLLAIDLTTGRCIDQLQAEPGTAVALGDYSPVLGDERLWATIQHGDT 238

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +Q  +      ++  +            WSP G  +   +         +        ++
Sbjct: 239 QQHLIWNPRTGERLSLDLSGLMGASPYSWSPDGTRLLLWQEDQGHKRFAIFTLAKQSIQV 298

Query: 386 LVEDSNLQAPTWSPSGRSLI--FSRKKDGD-TGSKLYSIDLNGRNET---LINTPAYASD 439
           L E       ++  +   +   +    DG   G ++  +D     +    +   P  +  
Sbjct: 299 LSELHGTYWSSYFGNTGEIYTHWGMILDGSVVGPEIVPLDAISGTQRHPLVAFDPVASGH 358

Query: 440 PQW 442
           P W
Sbjct: 359 P-W 360


>gi|296811320|ref|XP_002845998.1| NWD2 [Arthroderma otae CBS 113480]
 gi|238843386|gb|EEQ33048.1| NWD2 [Arthroderma otae CBS 113480]
          Length = 1675

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 48/270 (17%), Positives = 90/270 (33%), Gaps = 40/270 (14%)

Query: 197  DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
            D  G  IR   P R        F+PN + VA     ++    + L+D       +     
Sbjct: 1244 DETGVGIRPKNPRRLTRSDYATFTPNGKLVA---LYNDHASYLRLLDVTTGELTRACNEG 1300

Query: 257  RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--------NATERLTNTLFINISAS 308
                    FS +   A +    D  + ++ +   +           +RL   +  +    
Sbjct: 1301 GHHFKTVAFSPDSTVAAL-GSDDGLVRLWDIPTPAPAAASSFKGRLKRLWRPISTDAVDK 1359

Query: 309  YSPDSSQIVFE-------SDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDL 360
            Y P ++ + F        S   G   + +       + R S+   +  +    W     L
Sbjct: 1360 YYPPAAALAFSPNRKLVASGAYGGP-ITIWDVATGTRLRESKSSYDVGFNSISWEDAKRL 1418

Query: 361  IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI-----------FSRK 409
            +A   +      I +      ++R +   S+++A   SP GR +            F R 
Sbjct: 1419 VACEDYR----LIFLDAASLKEDRRIGGWSDIRA--ISPDGRMVAAHVRDSLVRDYFLRL 1472

Query: 410  KDGDTGSKLYSIDLNGRNETLINTPAYASD 439
             D +T  KL   +L GR+   +   A++ D
Sbjct: 1473 FDSETREKLQ--ELTGRSIHRVQAVAFSPD 1500



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 71/218 (32%), Gaps = 28/218 (12%)

Query: 219  FSPNQQKVAYAT--YDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            FS + + V       D      V+ + +         + + +++  AP+     +R   S
Sbjct: 1000 FSEDGKLVTSTQEPTDMRPGKAVFRVWNATTGALLNTMESPKAIAFAPK-----ERLAAS 1054

Query: 276  VQKDEAMDIYSVDLQSNATERL-TNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQS 333
            +    A+++  V +       L T      I+   +SPD  Q+   + R     +++   
Sbjct: 1055 LNLRNAVELRDV-VNGRRIRVLQTQPHESEINLVDFSPDGKQVAAGTCRG---LVHLWDV 1110

Query: 334  NGSDQKRISQDKEASYFDPVW-----SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                  R       S     +     SP    +    +        V   D     ++  
Sbjct: 1111 KTGHLLRTFVGGTGSGEGHHFHRVACSPDNKWVGARFWRDT---CRVWNADDGS--VVYN 1165

Query: 389  DSNLQAPTWSPSGR-SLIFSRKK---DGDTGSKLYSID 422
               +    + P  + +++F       D  TGS LY+ID
Sbjct: 1166 SGEVTDIVFLPDSKLAVVFFGTAQVLDLKTGSALYTID 1203


>gi|74150336|dbj|BAE32218.1| unnamed protein product [Mus musculus]
          Length = 305

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 113 AFSPDSQYLATGTHMGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 168 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 223

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 224 LAGTLGGHASWVLNVAFCPD 243



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 90/284 (31%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQ+  K   + P     +A 
Sbjct: 57  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQM--KSIDAGPVDAWTLA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 114 -FSPDSQYLAT---GTHMGKVNI--FGVESGKKEYSL--------------DTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L       ++ ++ PD +           + + V   
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LGGHASWVLNVAFCPDDTHF---VSSSSDKSVKVWDV 261

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I V  
Sbjct: 262 GTRTCIHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHVYD 302


>gi|67521860|ref|XP_658991.1| hypothetical protein AN1387.2 [Aspergillus nidulans FGSC A4]
 gi|40746061|gb|EAA65217.1| hypothetical protein AN1387.2 [Aspergillus nidulans FGSC A4]
 gi|259488275|tpe|CBF87597.1| TPA: meiotic recombination protein Ski8/Rec14, putative
           (AFU_orthologue; AFUA_1G08860) [Aspergillus nidulans
           FGSC A4]
          Length = 306

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 11/138 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +A       +   VY+  T   R P  +      + +  FS  GK         
Sbjct: 153 SPDGRFIA----SGHENGSVYIFSTETGRMPFSLSGLVKPVRSVAFSPGGKFLA---AAG 205

Query: 280 EAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           ++  I   D  S      LT      +S S+S     ++  S  +GK  + V   +  + 
Sbjct: 206 DSRVIVLYDTTSGEQVASLTGHAAWILSLSWSNTGEYLLSGSF-DGK--VKVWSIDTRNC 262

Query: 339 KRISQDKEASYFDPVWSP 356
                + E + +  +W P
Sbjct: 263 VATHSETERAIWSVIWLP 280



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 48/139 (34%), Gaps = 16/139 (11%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSG 368
           S D   +   + ++G  +++ M +N  + +    + + S+      SP G  IA    +G
Sbjct: 110 SADGQYLA-GTTQDGHVKVWDMNANEEEIR--DHETKGSFGTCIDLSPDGRFIASGHENG 166

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               + +   +    R+    S L  P     +SP G+ L             LY     
Sbjct: 167 S---VYIFSTETG--RMPFSLSGLVKPVRSVAFSPGGKFLA---AAGDSRVIVLYDTTSG 218

Query: 425 GRNETLINTPAYASDPQWV 443
            +  +L    A+     W 
Sbjct: 219 EQVASLTGHAAWILSLSWS 237


>gi|317474872|ref|ZP_07934142.1| prolyl oligopeptidase [Bacteroides eggerthii 1_2_48FAA]
 gi|316909010|gb|EFV30694.1| prolyl oligopeptidase [Bacteroides eggerthii 1_2_48FAA]
          Length = 845

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 87/299 (29%), Gaps = 43/299 (14%)

Query: 124 LRVEFRLWDVKDRKQ-IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
             +  +L  V   K   + K  F     +  + + I+ D+ +        F SR+  VS 
Sbjct: 154 YEIVIKLLSVAADKTAPVLKCEFEKDKEFADVGYQIAPDLKRRFALHNTAFGSRVRSVSL 213

Query: 183 SVVSGIIKNSLCVMDRDGANIRY---LTPSRDQILFEP------RFSPNQQKVAYATYDD 233
           S  +G    +    +      R    LT  +   +  P      R+ P   K+ Y     
Sbjct: 214 S-PNGKYLLTCYADNYSLKRSRTRCELTELKTGKVILPDADEKMRWMPRSNKLYYTVTGK 272

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +    V + D         + +         +S      + S               S  
Sbjct: 273 KRNDLV-VFDPATMHEEVLLKDVPEGYF--VWSPAEDYLIYSPDDKGEAV-------SGP 322

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            +RL +           PD        D   +  L          +R++    A Y + +
Sbjct: 323 LKRLLH-----------PDDRIP----DARSRNYLVKYDPATGLSERLTYGSHAVYLNDI 367

Query: 354 WSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
            S    L+  T  S          +I  +     Q   LV  D  +    +SP G+ L+
Sbjct: 368 SSDGKKLLCSTSKSDITQCPFSLTSIFEVDLATLQVDTLVAWDPYVNRGAYSPDGKRLL 426



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 73/226 (32%), Gaps = 42/226 (18%)

Query: 254 GNFRSMILAPRFSSNGKRAL------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
             F S + +   S NGK  L       S+++         +L++            +   
Sbjct: 202 TAFGSRVRSVSLSPNGKYLLTCYADNYSLKRS-RTRCELTELKTGKVIL----PDADEKM 256

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + P S+++ +    + +  L V       ++ + +D    YF  VWSP  D + ++   
Sbjct: 257 RWMPRSNKLYYTVTGKKRNDLVVFDPATMHEEVLLKDVPEGYF--VWSPAEDYLIYSPDD 314

Query: 368 GE-----------------------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                                     + +      G  ERL      +     S  G+ L
Sbjct: 315 KGEAVSGPLKRLLHPDDRIPDARSRNYLVKYDPATGLSERLTYGSHAVYLNDISSDGKKL 374

Query: 405 IFSRKKDGDTG-----SKLYSIDLNG-RNETLINTPAYASDPQWVG 444
           + S  K   T      + ++ +DL   + +TL+    Y +   +  
Sbjct: 375 LCSTSKSDITQCPFSLTSIFEVDLATLQVDTLVAWDPYVNRGAYSP 420



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 65/418 (15%), Positives = 127/418 (30%), Gaps = 85/418 (20%)

Query: 63  GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
             V   ++ DL+R   F  +   +F  ++ +    P  +         L+T         
Sbjct: 183 ADVGYQIAPDLKR--RFA-LHNTAFGSRVRSVSLSPNGK--------YLLTCYADNYSLK 231

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           R R    L ++K  K I+      +    R +    S+ +Y ++T               
Sbjct: 232 RSRTRCELTELKTGKVIL----PDADEKMRWMPR--SNKLYYTVT--------------- 270

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G  +N L V D    +   L   +D       +SP +  + Y+  D  + +   L 
Sbjct: 271 ----GKKRNDLVVFDPATMHEEVLL--KDVPEGYFVWSPAEDYLIYSPDDKGEAVSGPLK 324

Query: 243 DTR--------------------IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                                       +R+      +     SS+GK+ L S  K +  
Sbjct: 325 RLLHPDDRIPDARSRNYLVKYDPATGLSERLTYGSHAVYLNDISSDGKKLLCSTSKSDIT 384

Query: 283 D-------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKE---- 326
                   I+ VDL +   + L          +YSPD  +++           GK     
Sbjct: 385 QCPFSLTSIFEVDLATLQVDTLVAWDPYVNRGAYSPDGKRLLVVGSPSAFGGVGKNCGEH 444

Query: 327 --------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                   Q +++         I++D   S     W+     I F     +   I     
Sbjct: 445 PIANDFDTQAFIVDKATKKVTPITRDFNPSVDFLQWNRTDGCIYFNTTDEDCKHIYRYIP 504

Query: 379 DGSQERLLVEDSNLQAPTW--SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                 +L    ++ A ++  + +  ++      D  +    Y+ D+  +   L+  P
Sbjct: 505 QTDSFEMLPLQEDVIA-SFDLAENNPTVAAYVGGDNTSVGVAYTYDVKKKTSALLANP 561


>gi|223938668|ref|ZP_03630558.1| SMP-30/Gluconolaconase/LRE domain protein [bacterium Ellin514]
 gi|223892656|gb|EEF59127.1| SMP-30/Gluconolaconase/LRE domain protein [bacterium Ellin514]
          Length = 767

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 74/220 (33%), Gaps = 22/220 (10%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNG 269
                 P  SP    +   ++D++      L     D   K        I   P    +G
Sbjct: 36  SGYHNAPAISPVTGTIYIGSWDNK------LYALNPDGTLKWTYTTGGYIACVPSIGPDG 89

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              +     D    +Y+++            L  + + + +  S   ++         LY
Sbjct: 90  S--VYVSSAD--KKLYAINPDGTLKW---TYLADDTTGNLAIGSDGTIYFGTITYNSYLY 142

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            ++ +G+ + +     +A Y  P  +  G   IA    +G    +  +   G+++     
Sbjct: 143 AVKPDGTLKWQFPIVGQA-YNSPAVASDGTIYIAEVSVAGTDILLHAVTPAGTEKWNFAT 201

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           D+ L +P  +  G   I      G   + LY+I+ +G  +
Sbjct: 202 DTGLSSPAIASDGTVYI------GSLANMLYAINPDGTQK 235


>gi|218129091|ref|ZP_03457895.1| hypothetical protein BACEGG_00665 [Bacteroides eggerthii DSM 20697]
 gi|217988726|gb|EEC55045.1| hypothetical protein BACEGG_00665 [Bacteroides eggerthii DSM 20697]
          Length = 845

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/299 (16%), Positives = 87/299 (29%), Gaps = 43/299 (14%)

Query: 124 LRVEFRLWDVKDRKQ-IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
             +  +L  V   K   + K  F     +  + + I+ D+ +        F SR+  VS 
Sbjct: 154 YEIVIKLLSVAADKTAPVLKCEFEKDKEFADVGYQIAPDLKRRFALHNTAFGSRVRSVSL 213

Query: 183 SVVSGIIKNSLCVMDRDGANIRY---LTPSRDQILFEP------RFSPNQQKVAYATYDD 233
           S  +G    +    +      R    LT  +   +  P      R+ P   K+ Y     
Sbjct: 214 S-PNGKYLLTCYADNYSLKRSRTRCELTELKTGKVILPDADEKMRWMPRSNKLYYTVTGK 272

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +    V + D         + +         +S      + S               S  
Sbjct: 273 KRNDLV-VFDPATMHEEVLLKDVPEGYF--VWSPAEDYLIYSPDDKGEAV-------SGP 322

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            +RL +           PD        D   +  L          +R++    A Y + +
Sbjct: 323 LKRLLH-----------PDDRIP----DARSRNYLVKYDPATGLSERLTYGSHAVYLNDI 367

Query: 354 WSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
            S    L+  T  S          +I  +     Q   LV  D  +    +SP G+ L+
Sbjct: 368 SSDGKKLLCSTSKSDITQCPFSLTSIFEVDLATLQVDTLVAWDPYVNRGAYSPDGKRLL 426



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/226 (15%), Positives = 73/226 (32%), Gaps = 42/226 (18%)

Query: 254 GNFRSMILAPRFSSNGKRAL------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
             F S + +   S NGK  L       S+++         +L++            +   
Sbjct: 202 TAFGSRVRSVSLSPNGKYLLTCYADNYSLKRS-RTRCELTELKTGKVIL----PDADEKM 256

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + P S+++ +    + +  L V       ++ + +D    YF  VWSP  D + ++   
Sbjct: 257 RWMPRSNKLYYTVTGKKRNDLVVFDPATMHEEVLLKDVPEGYF--VWSPAEDYLIYSPDD 314

Query: 368 GE-----------------------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                                     + +      G  ERL      +     S  G+ L
Sbjct: 315 KGEAVSGPLKRLLHPDDRIPDARSRNYLVKYDPATGLSERLTYGSHAVYLNDISSDGKKL 374

Query: 405 IFSRKKDGDTG-----SKLYSIDLNG-RNETLINTPAYASDPQWVG 444
           + S  K   T      + ++ +DL   + +TL+    Y +   +  
Sbjct: 375 LCSTSKSDITQCPFSLTSIFEVDLATLQVDTLVAWDPYVNRGAYSP 420



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 64/418 (15%), Positives = 126/418 (30%), Gaps = 85/418 (20%)

Query: 63  GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
             V   ++ DL+R   F  +   +F  ++ +    P  +         L+T         
Sbjct: 183 ADVGYQIAPDLKR--RFA-LHNTAFGSRVRSVSLSPNGK--------YLLTCYADNYSLK 231

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           R R    L ++K  K I+      +    R +    S+ +Y ++T               
Sbjct: 232 RSRTRCELTELKTGKVIL----PDADEKMRWMPR--SNKLYYTVT--------------- 270

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
               G  +N L V D    +   L   +D       +SP +  + Y+  D  + +   L 
Sbjct: 271 ----GKKRNDLVVFDPATMHEEVLL--KDVPEGYFVWSPAEDYLIYSPDDKGEAVSGPLK 324

Query: 243 DTR--------------------IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                                       +R+      +     SS+GK+ L S  K +  
Sbjct: 325 RLLHPDDRIPDARSRNYLVKYDPATGLSERLTYGSHAVYLNDISSDGKKLLCSTSKSDIT 384

Query: 283 D-------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKE---- 326
                   I+ VDL +   + L          +YSPD  +++           GK     
Sbjct: 385 QCPFSLTSIFEVDLATLQVDTLVAWDPYVNRGAYSPDGKRLLVVGSPSAFGGVGKNCGEH 444

Query: 327 --------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                   Q +++         I++D   S     W+     I F     +   I     
Sbjct: 445 PIANDFDTQAFIVDKATKKVAPITRDFNPSVDFLQWNRTDGCIYFNTTDEDCKHIYRYIP 504

Query: 379 DGSQERLLVEDSNLQAPTW--SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                 +L    ++ A ++  + +  ++         +    Y+ D+  +   L+  P
Sbjct: 505 QTDSFEMLPLQEDVIA-SFDLAENNPTVAAYVGGGNTSVGVAYTYDVKKKTSALLANP 561


>gi|198436559|ref|XP_002131526.1| PREDICTED: similar to WD repeat-containing protein 26 (CUL4- and
           DDB1-associated WDR protein 2) (Myocardial ischemic
           preconditioning up-regulated protein 2) [Ciona
           intestinalis]
          Length = 581

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 72/221 (32%), Gaps = 16/221 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +       ++   FS +   +A  + D   I+      TR     + +      +    
Sbjct: 268 QVLSDHCDEVWFCCFSHDGSMLATGSKDSCVIIWDVNPVTRQLVHARSLSGHTYGVGYLV 327

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIVFESDR 322
           +S +    +     +E+ +++  + ++       N    +  +   ++PD  + V     
Sbjct: 328 WSPDDTHIIACGT-EESSELWIWNAKTGELRTKMNNSAEDSLSCCCWTPDGKKYV---TG 383

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGS 381
             K Q Y    +G+    +   +          P    +     +  +  I     +D S
Sbjct: 384 GTKGQFYQCDLDGNI---LDSWEGVRVQSLACLPDNKTVL---SADTQQRIRAYNFEDMS 437

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              ++ ED  + + + S  G  ++ +    G     L+ ID
Sbjct: 438 DYNVIKEDHPVMSFSLSSDGHLVLLNVATQG---VHLWDID 475


>gi|195476024|ref|XP_002090282.1| GE13019 [Drosophila yakuba]
 gi|194176383|gb|EDW89994.1| GE13019 [Drosophila yakuba]
          Length = 775

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 62/146 (42%), Gaps = 14/146 (9%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--LQSNATERL 297
           +++  +  R  + I    + I + R+S +G   L +  +D  + I+S    L+S   +  
Sbjct: 104 FVILNKSARVERSISAHGAAISSGRWSPDGAGLL-TAGEDGVIKIWSRSGMLRSTVVQ-- 160

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            N   I   A ++P+S+ IVF   + G   +  + +N    +   +  +       WSPQ
Sbjct: 161 -NEEAIRC-ARWAPNSTSIVFC--QGGHISIKPLAANSKLIR--WRAHDGLVLSLSWSPQ 214

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQE 383
            ++IA     GE F   +    G+  
Sbjct: 215 SNVIA---SGGEDFRFKIWDAQGANL 237



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 69/214 (32%), Gaps = 16/214 (7%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLT 207
              R +    S  + +SI+      +S       + + +      + +  R G  +R   
Sbjct: 100 NDGRFVILNKSARVERSISAHGAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM-LRSTV 158

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              ++ +   R++PN   + +          + +     +    R      ++L+  +S 
Sbjct: 159 VQNEEAIRCARWAPNSTSIVFC-----QGGHISIKPLAANSKLIRWRAHDGLVLSLSWSP 213

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                  S  +D    I+  D Q           +   S +++P+   ++          
Sbjct: 214 QSNVIA-SGGEDFRFKIW--DAQGANLFTSAAEEYAITSVAFNPEKDYLL----VGTFNL 266

Query: 328 LYVMQSNG--SDQKRISQDKEASYFDPVWSPQGD 359
           L +  SNG   +  R S     S F+  WS  G 
Sbjct: 267 LKLCHSNGWSYNTARFSSPCVGSLFNLCWSADGT 300


>gi|193077647|gb|ABO12479.2| hypothetical protein A1S_2052 [Acinetobacter baumannii ATCC 17978]
          Length = 414

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 80/275 (29%), Gaps = 45/275 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF------ 256
              S          S + + +    Y+ +D        L         + + N       
Sbjct: 141 TVNSHGGHPTHASISLDGKFLFVSNYSAFDKGRGGVAVLPILPNGHLGEMVQNIVFAEGS 200

Query: 257 --------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-- 306
                        +  FS +GK    S   ++ +  +  +      + L      ++S  
Sbjct: 201 GHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYNPS--KPQPLEADKSRDVSFK 258

Query: 307 -------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------QDKEASYF 350
                    +SP+  Q    ++   + ++          K+++           +  S  
Sbjct: 259 HGSGPRHMVFSPNGKQAYITAEM--RSEIVTFNVQDGHLKKVAELKLVHEDKTPEFKSAS 316

Query: 351 DPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS--GRSLIF 406
             + SP G   IA  + +  K  +  ++++G   +  V  +N   P  +S    G+ L  
Sbjct: 317 GIILSPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGIEPRAFSFDESGKYLYV 376

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +          L+  D    +   +   A  S P 
Sbjct: 377 TNVYSN--NISLFRFDTKNGSLKPLGDAAKISTPT 409


>gi|184158564|ref|YP_001846903.1| 3-carboxymuconate cyclase [Acinetobacter baumannii ACICU]
 gi|183210158|gb|ACC57556.1| 3-carboxymuconate cyclase [Acinetobacter baumannii ACICU]
          Length = 414

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 80/275 (29%), Gaps = 45/275 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF------ 256
              S          S + + +    Y+ +D        L         + + N       
Sbjct: 141 TVNSHGGHPTHASISLDGKFLFVSNYSAFDKGRGGVAVLPILPNGHLGEMVQNIVFAEGS 200

Query: 257 --------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-- 306
                        +  FS +GK    S   ++ +  +  +      + L      ++S  
Sbjct: 201 GHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYNPS--KPQPLEADKSRDVSFK 258

Query: 307 -------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------QDKEASYF 350
                    +SP+  Q    ++   + ++          K+++           +  S  
Sbjct: 259 HGSGPRHMVFSPNGKQAYITAEM--RSEIVTFNVQDGHLKKVAELKLVHEDKTPEFKSAS 316

Query: 351 DPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS--GRSLIF 406
             + SP G   IA  + +  K  +  ++++G   +  V  +N   P  +S    G+ L  
Sbjct: 317 GIILSPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGIEPRAFSFDESGKYLYV 376

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +          L+  D    +   +   A  S P 
Sbjct: 377 TNVYSN--NISLFRFDTKNGSLKPLGDAAKISTPT 409


>gi|157167588|ref|XP_001655056.1| hypothetical protein AaeL_AAEL010937 [Aedes aegypti]
 gi|108872810|gb|EAT37035.1| conserved hypothetical protein [Aedes aegypti]
          Length = 358

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 62/161 (38%), Gaps = 22/161 (13%)

Query: 219 FSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPK-----RIGNFRSMILAPRFSSN 268
            SP+   + +     E     D   V+L  T+   +PK     RI       +  R+S +
Sbjct: 6   ISPSG-WIIFTAMLLETIADADYRIVFLWSTKEFASPKDRRSFRINVEYDHAMRVRWSPD 64

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----FIN--ISASYSPDSSQIVFESD 321
           G+  ++    +  +++Y VD   N  +  T         I+  +    +PD   ++  S+
Sbjct: 65  GRALVVYKYSEGCIEVYKVDKADNWFQNPTKGSTFPRAHIDDIVGFGIAPDGKYLMTCSN 124

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              K  L V    G+  ++I     ++Y     SP G  IA
Sbjct: 125 ---KTDLTVWDVRGNVLEKIDTFLMSTYNAK-ISPCGKFIA 161



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 13/113 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMD--TRIDRAPKRIGNFRSM----ILAPRFSSNGKR 271
           R+SP+ + +    Y  E  + VY +D      + P +   F       I+    + +GK 
Sbjct: 60  RWSPDGRALVVYKYS-EGCIEVYKVDKADNWFQNPTKGSTFPRAHIDDIVGFGIAPDGKY 118

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV---FESD 321
            +    K    D+   D++ N  E++   L    +A  SP    I    F SD
Sbjct: 119 LMTCSNK---TDLTVWDVRGNVLEKIDTFLMSTYNAKISPCGKFIAACGFTSD 168


>gi|282896298|ref|ZP_06304320.1| WD-40 repeat protein [Raphidiopsis brookii D9]
 gi|281198794|gb|EFA73673.1| WD-40 repeat protein [Raphidiopsis brookii D9]
          Length = 357

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 64/188 (34%), Gaps = 16/188 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S +  K+A  +   E I+      T +  +  +  +         FS++ +   +  Q
Sbjct: 27  NWSKSGHKLAVTSASGEVIIWENQTITNLQTSTGKSLDCGG------FSADDQYLAVGGQ 80

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + I+    +    + L N        +++  ++ + F   R     + V   +  +
Sbjct: 81  -DGNVKIWR---EKELIQTLANAPAWIDKLAWNHTNNLLAFSLGR----YVQVWDVDARE 132

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                  + +S     W   G  +A + + G    +   +    +  +L  D+      W
Sbjct: 133 LVVTLNFENSSILGIDWRQDGKYLAISGYKG--VKVWNRENWDEEPYILSTDTASTGVVW 190

Query: 398 SPSGRSLI 405
           S  G+ L 
Sbjct: 191 SNDGKYLA 198


>gi|255083532|ref|XP_002504752.1| predicted protein [Micromonas sp. RCC299]
 gi|226520020|gb|ACO66010.1| predicted protein [Micromonas sp. RCC299]
          Length = 278

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 56/163 (34%), Gaps = 18/163 (11%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            F+ N      +   D    ++  DL       LT      +   + P  S+++     +
Sbjct: 129 AFAPNAPLLA-TASDDGTAVVW--DLNGGT---LTGHGDDVVGVCFHPRDSRVLATGSDD 182

Query: 324 GKEQLYVMQS--NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           G  +++  +   +G     ++           +SP G ++A     G      V+     
Sbjct: 183 GTVRVWDTRGTCDGGVVTTLTLHGSRETKRIAFSPNGAMLAAGGADGT---CAVVDAST- 238

Query: 382 QERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            ER+         +    WSP  +S++ +     D   +++S+
Sbjct: 239 WERIATLAGHTDTVFDVAWSPDAKSIVTASH---DASWRVWSV 278



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 57/192 (29%), Gaps = 22/192 (11%)

Query: 184 VVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            VSG     L   DRDG        +       +    F+PN   +A A+ D      V+
Sbjct: 93  TVSGDGTCRLW-QDRDGNLTYECVGVLEGHRDEVNGLAFAPNAPLLATASDD--GTAVVW 149

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL--QSNATERLT 298
            ++         +      ++   F     R L +   D  + ++             LT
Sbjct: 150 DLNGGT------LTGHGDDVVGVCFHPRDSRVLATGSDDGTVRVWDTRGTCDGGVVTTLT 203

Query: 299 NTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWS 355
                     ++SP+ + +       G         + S  +RI+     +   FD  WS
Sbjct: 204 LHGSRETKRIAFSPNGAMLA-----AGGADGTCAVVDASTWERIATLAGHTDTVFDVAWS 258

Query: 356 PQGDLIAFTKFS 367
           P    I      
Sbjct: 259 PDAKSIVTASHD 270


>gi|255952636|ref|XP_002567071.1| Pc17g01240 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211586574|emb|CAP79411.1| Pc17g01240 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 291

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 63/208 (30%), Gaps = 27/208 (12%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           F+P    +   +A      I  V  ++       +   +F        FS + +      
Sbjct: 30  FAPKGSIIRKVFARXPPTWISEVSGVEENXSADVQSFDDFSGRGFPISFSRDSRTLAYGA 89

Query: 277 QKDEAMDIYSVDLQSNATER-LTNTLFINISA----SYSPDSS---QIVFESDREGKEQL 328
                     +   +    + L      +I      S+SP+      I F  DR     +
Sbjct: 90  NNSSIKLRAVM---TGVLRQSLERHP-QDIEGVSLVSFSPNGQLLASIAF--DRT----I 139

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-V 387
            +       Q R  Q       +  +SP    +A    SG    +  +  +    RL   
Sbjct: 140 KLWDPAEDRQARDLQTSRLKVRELTFSPCSRFLA--SHSGNTIQLWDVDTETDSLRLRHT 197

Query: 388 EDSNLQA---P-TWSPSGRSLIFSRKKD 411
            D +L     P ++SP+G+ L  S    
Sbjct: 198 LDGHLDHLWGPLSFSPNGQLLATSSSDH 225



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 8/164 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                   F   FS + + +AY   +    LR  +         +   +   + L   FS
Sbjct: 66  FDDFSGRGFPISFSRDSRTLAYGANNSSIKLRAVMTGVLRQSLERHPQDIEGVSL-VSFS 124

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            NG+    S+  D  + ++    +      L  +       ++SP S  +   S      
Sbjct: 125 PNGQLLA-SIAFDRTIKLWD-PAEDRQARDLQTSRLKVRELTFSPCSRFLA--SHSGNTI 180

Query: 327 QLYVMQSNGSDQK-RISQDK--EASYFDPVWSPQGDLIAFTKFS 367
           QL+ + +     + R + D   +  +    +SP G L+A +   
Sbjct: 181 QLWDVDTETDSLRLRHTLDGHLDHLWGPLSFSPNGQLLATSSSD 224


>gi|149575523|ref|XP_001519850.1| PREDICTED: similar to WD repeat domain 50 [Ornithorhynchus
           anatinus]
          Length = 695

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 76/215 (35%), Gaps = 9/215 (4%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQ-IL 214
            +  D    +       + R    ++ +++     SL +   DG  N +  + S +   +
Sbjct: 294 KMCPDANCQLPSSGPLSSVRFHPSAQVMMTASQDTSLSLFQVDGRTNPKIQSISLEHFPI 353

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           ++ RFS + +++       + I    ++   I    +  G     +     S +G   L+
Sbjct: 354 YQARFSASGEQLIATGLRSKIIYVYDMIGGSISPVHQVRGLEEKFVRKFEVSPDGSFLLL 413

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +  K     ++ + ++S            +  + +SPDSS++   SD      ++V    
Sbjct: 414 TGTKG---YLHLLSMKSKELIGSMKISGRSQDSVFSPDSSKVFTTSDSG---DVFVWDVG 467

Query: 335 GSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             +   R + +          S  G  +A    +G
Sbjct: 468 SRNCLHRFTNEGCFLSQCIAVSRNGQYVACGSSTG 502


>gi|254251795|ref|ZP_04945113.1| 3-carboxymuconate cyclase [Burkholderia dolosa AUO158]
 gi|124894404|gb|EAY68284.1| 3-carboxymuconate cyclase [Burkholderia dolosa AUO158]
          Length = 471

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/327 (14%), Positives = 95/327 (29%), Gaps = 32/327 (9%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ-IIGKKFFSSPASWRKIAHTISDDIYQS 165
           G   L+ G     G D + V +R +D K      +      +P+         +      
Sbjct: 106 GVYNLLVGTYTDGGSDGIYV-YR-FDTKTGSVAPVSSTKTVNPSYLLPSRDGRTVYAVNE 163

Query: 166 ITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQ-ILFEPRFS--- 220
           + G+ G    R    +            +  +  +G +  YL  S D   L    +S   
Sbjct: 164 LPGDNGPATQRGGISAFGFDPKTGTLTFIDRVSSEGNDPCYLALSPDGKYLVTANYSVAS 223

Query: 221 -PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            P      +   D   +    L        P +     + + +  FS +G+   +     
Sbjct: 224 DPGGSFAVFPVRDGGAVGDAVLTVHHEGTGPVKGRQDGAHVHSTVFSPDGRYLFVQDLGT 283

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISA-------SYSPDSSQIVFESDREGKEQLYVM 331
           + +  Y   +         T+T +  +          +  D  +  + +           
Sbjct: 284 DKIYGYRYTVDGSRGLISPTDTRYTPVKPGSGPRHMVFGADG-RFAYVTTELNASVDVFA 342

Query: 332 QSNGSDQKRIS-------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             +G  Q   +        + +        SP G  + +    G+   I +   D +  R
Sbjct: 343 YRDGKLQPVQTVSMSAPGFNGKVGGAAIHLSPDGRFL-YASNRGDANEIVIYAIDKASGR 401

Query: 385 LLV---EDSNLQAPT---WSPSGRSLI 405
           L     + S  + P      P+G+ LI
Sbjct: 402 LKTVGRQSSLGKTPREFLIDPTGKWLI 428


>gi|47220310|emb|CAG03344.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 802

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 61/170 (35%), Gaps = 11/170 (6%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +MD   A+   +       ++   FSP++  +  ++ D    +R++ + T       + 
Sbjct: 496 RIMDEKTASESKILHGHSGPVYGISFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKG 553

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            N+   +    FS +G    +S   D    +++ D         +  L       + P+S
Sbjct: 554 HNYP--VWDVSFSPHG-YYFVSGGHDRVARLWATDH-YQPLRIFSGHLADVTCTRFHPNS 609

Query: 314 SQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           + +    SDR     + +      +  RI    +       +SP G  +A
Sbjct: 610 NYVATGSSDRT----IRLWDVLTGNCVRIFTGHKGPIHTLDFSPSGKFLA 655



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 26/89 (29%), Gaps = 4/89 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG       +   D      +       +   RF PN   VA  + D      + L D 
Sbjct: 571 VSGGHDRVARLWATDHYQPLRIFSGHLADVTCTRFHPNSNYVATGSSDR----TIRLWDV 626

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                 +     +  I    FS +GK   
Sbjct: 627 LTGNCVRIFTGHKGPIHTLDFSPSGKFLA 655


>gi|3023855|sp|Q25306|GBLP_LEIMA RecName: Full=Guanine nucleotide-binding protein subunit beta-like
           protein; AltName: Full=Antigen LACK
 gi|1276477|gb|AAA97577.1| LACK [Leishmania major]
          Length = 312

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 59/167 (35%), Gaps = 12/167 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + D R  +  ++       +LA  FS +  R ++S  +D  + +++V  +       
Sbjct: 88  SIRMWDLRNGQCQRKFLKHTKDVLAVAFSPD-DRLIVSAGRDNVIRVWNVAGECMHEFLR 146

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   S  +SP     +  S       + V   NG   +R  +           SP 
Sbjct: 147 DGHEDWVSSICFSPSLEHPIVVSG-SWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPD 205

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPS 400
           G L A     G+  A  +      +   L +  N+++P     +SP+
Sbjct: 206 GSLCA---SGGKDGAALLWDLSTGE--QLFK-INVESPINQIGFSPN 246



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 17/163 (10%)

Query: 163 YQSITGEKGDFNSRILFV----SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           ++ +     D+ S I F        VVSG   N++ V + +G             +    
Sbjct: 142 HEFLRDGHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVT 201

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+    A             L D        +I N  S I    FS N     ++ ++
Sbjct: 202 VSPDGSLCA----SGGKDGAALLWDLSTGEQLFKI-NVESPINQIGFSPNRFWMCVATER 256

Query: 279 DEAMDIYSVDLQSNATE-RLTNT---LFINISASYSPDSSQIV 317
                +   DL+S A    LT         IS ++S D + + 
Sbjct: 257 S----LSVYDLESKAVIAELTPDGAKPSECISIAWSADGNTLY 295


>gi|326435569|gb|EGD81139.1| arginyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 701

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 73/247 (29%), Gaps = 32/247 (12%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V D +            + +    F    + +A  + D      + L +       K + 
Sbjct: 424 VWDFESGEFERTLKGHTKAVNNLAFDKEGRMLASCSADT----TIKLWNFETYTCVKTLQ 479

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                +    F  +G   LIS  +D+ + ++ V         L            S D  
Sbjct: 480 GHEHNVSGVCFDPSGD-LLISASRDKTVRVFEV-ATGLCVRILEGHTEWVRRVDVSADG- 536

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--------------- 359
              F         + V  +   + + +    +    D   +PQ                 
Sbjct: 537 --AFFVSGSNDHTVRVWDAKSGECRHVLTGHDHVVEDVKIAPQSATPAINTLVLGEETSE 594

Query: 360 -LIA--FTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             +A  F    G    I +      QE  RL+  D+ ++A  W P G+ L+ +     D 
Sbjct: 595 PRVAGPFAASGGRDRIICIWDVSTGQELGRLVGHDNWVRALAWHPGGKYLLSASD---DK 651

Query: 415 GSKLYSI 421
             +++ I
Sbjct: 652 TVRVWDI 658



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/193 (9%), Positives = 47/193 (24%), Gaps = 26/193 (13%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
               ++ + + +           +  +    F P+   +  A+ D      V + +    
Sbjct: 459 SADTTIKLWNFETYTCVKTLQGHEHNVSGVCFDPSGDLLISASRDK----TVRVFEVATG 514

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINIS 306
              + +      +     S++G      V       +   D +S      LT    +   
Sbjct: 515 LCVRILEGHTEWVRRVDVSADG---AFFVSGSNDHTVRVWDAKSGECRHVLTGHDHVVED 571

Query: 307 ASYSPDSSQIV------------------FESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
              +P S+                     F +       + +   +   +       +  
Sbjct: 572 VKIAPQSATPAINTLVLGEETSEPRVAGPFAASGGRDRIICIWDVSTGQELGRLVGHDNW 631

Query: 349 YFDPVWSPQGDLI 361
                W P G  +
Sbjct: 632 VRALAWHPGGKYL 644


>gi|239832636|ref|ZP_04680965.1| WD repeat-containing protein [Ochrobactrum intermedium LMG 3301]
 gi|239824903|gb|EEQ96471.1| WD repeat-containing protein [Ochrobactrum intermedium LMG 3301]
          Length = 324

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 66/199 (33%), Gaps = 17/199 (8%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           + GK   +     R +  T  D     +      + + +       V      +  V   
Sbjct: 55  VDGKSLITGGEDGR-VCRTDVDGTVSELAKVPRKWMTAVAAGPGGTVGFASGRTAWVRTS 113

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG    +      + +    F+P  Q++A A Y+        L+ T     P  +  ++ 
Sbjct: 114 DGKVQEFAQERSVEAI---AFAPKGQRLAIARYNG-----ATLIWTGTAAKPVEL-EWKG 164

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             +   FS +G+  + S+Q++ A+  +   L+     R+T         S+S  +  +  
Sbjct: 165 AHIGVIFSPDGRFLITSMQEN-ALHGWR--LEDTKHMRMTGYPAKVKDWSWSAKAKWLA- 220

Query: 319 ESDREGKEQLYVMQSNGSD 337
                G     V    G D
Sbjct: 221 ---TSGAPAAIVWPFAGKD 236



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 64/190 (33%), Gaps = 30/190 (15%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQS------NATERLTNTLFINISASYSPDSS 314
           L+   S +GK  +      E   +   D+            +      +           
Sbjct: 49  LSATVSVDGKSLI---TGGEDGRVCRTDVDGTVSELAKVPRKWMT--AVAAGP-----GG 98

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            + F S R      +V  S+G  Q+     +E S     ++P+G  +A  +++G      
Sbjct: 99  TVGFASGRT----AWVRTSDGKVQE---FAQERSVEAIAFAPKGQRLAIARYNGATL--- 148

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           +     ++   L          +SP GR LI S +++   G +L     + ++  +   P
Sbjct: 149 IWTGTAAKPVELEWKGAHIGVIFSPDGRFLITSMQENALHGWRL----EDTKHMRMTGYP 204

Query: 435 AYASDPQWVG 444
           A   D  W  
Sbjct: 205 AKVKDWSWSA 214


>gi|222612968|gb|EEE51100.1| hypothetical protein OsJ_31819 [Oryza sativa Japonica Group]
          Length = 533

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 82/205 (40%), Gaps = 12/205 (5%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    +  ++  RFS +   +A ++ D   I+     D  + +    +G  ++ I    
Sbjct: 223 QILCGHNNEVWFVRFSNDGNYLASSSSDCTAIIWKVEEDDTLTKKHCLVG-HKNPISFVA 281

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESD- 321
           +S N  R L++    E++ ++  ++ +     +  ++   I  S ++ P+S +IV  S  
Sbjct: 282 WSPN-DRMLLTCGNGESVKLW--NVATGECSLKFSSSVGHIINSCAWFPNSEKIVCASCE 338

Query: 322 -REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                ++++     G + +    D+     D   +P    +     +     I + +   
Sbjct: 339 PESSPKRIFTCDLEGQELESWVGDRIPKVSDIAVTPDSKHLICVCSN----EIWIRELPK 394

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI 405
            +E  + E   + + + S  G+SLI
Sbjct: 395 GREWRIREQQTISSLSLSGDGQSLI 419


>gi|218264847|ref|ZP_03478527.1| hypothetical protein PRABACTJOHN_04237 [Parabacteroides johnsonii
           DSM 18315]
 gi|218221741|gb|EEC94391.1| hypothetical protein PRABACTJOHN_04237 [Parabacteroides johnsonii
           DSM 18315]
          Length = 712

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/232 (12%), Positives = 75/232 (32%), Gaps = 50/232 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--------------------- 257
           +SP+ +K+A     D    R+ L+++      + I  +R                     
Sbjct: 179 WSPDSRKLATVKVRDVQERRIPLIESSPSSQKQPILQWRDYAKPGDVLPVYLPVLFDVEA 238

Query: 258 ----SMILAP----------RFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNT- 300
               ++ +AP           +  + +       +       I  V+    +   L +  
Sbjct: 239 RRQVALDVAPYENQYYLNLTGWRKDSRAFTFEFNQRGHQRYVIGEVNAADGSIRHLVDEQ 298

Query: 301 ----LFINISASYS-PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
               ++   +  Y   D  ++++ S+R+G   LY++       KR     E       + 
Sbjct: 299 TKTFIYYYNNFRYDLDDGKELLWISERDGWRHLYLIDGTSGQVKRQVTKGEWVLRQVDYV 358

Query: 356 PQGDLIAFTKFSG-----EKFAIG--VMKKDGSQERLLVEDSNLQAPTWSPS 400
            + + + +   SG     + + +    +  DG+    +  ++     T+S  
Sbjct: 359 DETNRVVYFTASGFNKGEDPYNLHYCRINLDGTGFTDMTPENGNHRVTFSAD 410


>gi|242280505|ref|YP_002992634.1| hypothetical protein Desal_3043 [Desulfovibrio salexigens DSM 2638]
 gi|242123399|gb|ACS81095.1| conserved hypothetical protein [Desulfovibrio salexigens DSM 2638]
          Length = 417

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 55/158 (34%), Gaps = 17/158 (10%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS++G +    V         +VD        +T+ + I++  + SPD ++      ++G
Sbjct: 275 FSADGSKLWAIVAPTFGSFTVAVD---GQPWSITSPVVIDL--AVSPDGNRAA-ALGKDG 328

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +  Y +  +G     +        + PV+SP    +A       ++    +  DG    
Sbjct: 329 YD--YTVLCDGK----VWPGVYQMAWKPVFSPDSSKVAAKVEKNGRY---TVVLDGKPYA 379

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              +      P +SP    ++      G     +  + 
Sbjct: 380 QDFDQ--CWEPIFSPDSSKVLIRAIDGGKFVRIVAEVS 415



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 57/158 (36%), Gaps = 20/158 (12%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +  +FS +  K+            V      +D  P  I +   +++    S +G RA 
Sbjct: 270 CWHQQFSADGSKLWAIVAPTFGSFTV-----AVDGQPWSITSP--VVIDLAVSPDGNRAA 322

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            ++ KD        D      +       +     +SPDSS++  + ++ G+   Y +  
Sbjct: 323 -ALGKDGYDYTVLCDG-----KVWPGVYQMAWKPVFSPDSSKVAAKVEKNGR---YTVVL 373

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +G    +         ++P++SP    +      G KF
Sbjct: 374 DGKPYAQ----DFDQCWEPIFSPDSSKVLIRAIDGGKF 407


>gi|212543279|ref|XP_002151794.1| meiotic recombination protein Ski8/Rec14, putative [Penicillium
           marneffei ATCC 18224]
 gi|210066701|gb|EEA20794.1| meiotic recombination protein Ski8/Rec14, putative [Penicillium
           marneffei ATCC 18224]
          Length = 221

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 9/113 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + +A           +Y+      R P  +      + A  FS  GK         
Sbjct: 68  SNDGKYIA----SGHQNGSIYMFSNETGRMPFSLSGLIKPVRAVAFSPGGKLLA---AAG 120

Query: 280 EAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           ++  I   D +S     +LT      +S  +S     ++  S  +GK +++ +
Sbjct: 121 DSKVIVLYDTESGEQVTQLTGHSAWILSLDWSHTGEYLLSASF-DGKVKVWSV 172



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 46/154 (29%), Gaps = 19/154 (12%)

Query: 298 TNTLFINISASY----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           T+T  I    ++    S D   +           + V   +  +Q R  + K A      
Sbjct: 10  TSTDAIKEPDTWAICLSEDGRYLA---GTTNNGHIKVWDLSNGEQFRDYETKGAFGACID 66

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRK 409
            S  G  IA    +G    I +   +    R+    S L  P     +SP G+ L     
Sbjct: 67  MSNDGKYIASGHQNGS---IYMFSNETG--RMPFSLSGLIKPVRAVAFSPGGKLLA---A 118

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
                   LY  +   +   L    A+     W 
Sbjct: 119 AGDSKVIVLYDTESGEQVTQLTGHSAWILSLDWS 152


>gi|115482406|ref|NP_001064796.1| Os10g0465000 [Oryza sativa Japonica Group]
 gi|113639405|dbj|BAF26710.1| Os10g0465000 [Oryza sativa Japonica Group]
          Length = 317

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 82/205 (40%), Gaps = 12/205 (5%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    +  ++  RFS +   +A ++ D   I+     D  + +    +G  ++ I    
Sbjct: 7   QILCGHNNEVWFVRFSNDGNYLASSSSDCTAIIWKVEEDDTLTKKHCLVG-HKNPISFVA 65

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESD- 321
           +S N  R L++    E++ ++  ++ +     +  ++   I  S ++ P+S +IV  S  
Sbjct: 66  WSPN-DRMLLTCGNGESVKLW--NVATGECSLKFSSSVGHIINSCAWFPNSEKIVCASCE 122

Query: 322 -REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                ++++     G + +    D+     D   +P    +     +     I + +   
Sbjct: 123 PESSPKRIFTCDLEGQELESWVGDRIPKVSDIAVTPDSKHLICVCSN----EIWIRELPK 178

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI 405
            +E  + E   + + + S  G+SLI
Sbjct: 179 GREWRIREQQTISSLSLSGDGQSLI 203


>gi|22758311|gb|AAN05515.1| putative WD domain containing protein [Oryza sativa Japonica Group]
          Length = 521

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 82/205 (40%), Gaps = 12/205 (5%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    +  ++  RFS +   +A ++ D   I+     D  + +    +G  ++ I    
Sbjct: 267 QILCGHNNEVWFVRFSNDGNYLASSSSDCTAIIWKVEEDDTLTKKHCLVG-HKNPISFVA 325

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESD- 321
           +S N  R L++    E++ ++  ++ +     +  ++   I  S ++ P+S +IV  S  
Sbjct: 326 WSPN-DRMLLTCGNGESVKLW--NVATGECSLKFSSSVGHIINSCAWFPNSEKIVCASCE 382

Query: 322 -REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                ++++     G + +    D+     D   +P    +     +     I + +   
Sbjct: 383 PESSPKRIFTCDLEGQELESWVGDRIPKVSDIAVTPDSKHLICVCSN----EIWIRELPK 438

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI 405
            +E  + E   + + + S  G+SLI
Sbjct: 439 GREWRIREQQTISSLSLSGDGQSLI 463


>gi|304407975|ref|ZP_07389625.1| S-layer domain protein [Paenibacillus curdlanolyticus YK9]
 gi|304342994|gb|EFM08838.1| S-layer domain protein [Paenibacillus curdlanolyticus YK9]
          Length = 777

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 65/181 (35%), Gaps = 11/181 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG- 324
           S +GK+       +  ++++     S+   ++T     NI+       + +++  D+ G 
Sbjct: 195 SPDGKKIGYIQPWNNRLNVFVKQAGSSEAVQVTKETDNNIAGFAWKTDNTLLYAMDKGGD 254

Query: 325 -KEQLYVMQSNGSDQKRISQDKEASYF---DPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
               +Y + ++G+ +K ++  +             P   L+A  K     F +  +  + 
Sbjct: 255 ENYHIYKINADGTGRKDLTPYENTRALLVDGLADQPGYLLVALNKRDPRVFDVYRLNMES 314

Query: 381 SQERLLVEDSNLQAPTWS--PSGR-SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               L+ E+    +  W     G+  +  +   DG   S LY    +   E L  T    
Sbjct: 315 GALELVAENPGNIS-GWMTDHDGKLRIAIAS--DGIISSILYRETEDKPFEELYTTNVGD 371

Query: 438 S 438
            
Sbjct: 372 Q 372


>gi|260773979|ref|ZP_05882894.1| oligogalacturonate lyase [Vibrio metschnikovii CIP 69.14]
 gi|260610940|gb|EEX36144.1| oligogalacturonate lyase [Vibrio metschnikovii CIP 69.14]
          Length = 387

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 71/212 (33%), Gaps = 39/212 (18%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDRE 323
           F+ +G   L +   D   + Y VDL +    +LT     N    + S D     +  +  
Sbjct: 43  FTQDGNNLLFAGDFDGNRNYYLVDLTTQQATQLTEGKGDNTFGGFISHDDRAFFYVKNEL 102

Query: 324 GKEQLYVMQSNGSDQKRIS-----QDKEASYFDPV--------------WSPQGDLIAFT 364
               L  +  +  +++ I           ++                  W P      F 
Sbjct: 103 ---NLIKVDLDSLEEQIIYTVDDEWKGYGTWVANSECTKLVGIEILKRDWQPLTSWEKFA 159

Query: 365 KFSGEKFAIGVMKKD--GSQERLLVEDSNL-QAPTWSP-SGRSLIFSRKKDGDT-GSKLY 419
           +F   K    ++K D    +  ++ +D+     P + P    ++ F  +   D   ++++
Sbjct: 160 EFYHTKPTCRLIKVDIQSGELEVVHQDNAWLGHPIYRPFDDSTIGFCHEGPHDLVDARMW 219

Query: 420 SIDLNGRNETLINTPAYASDPQ-------WVG 444
            ++ +GR+   I     A DP        W+ 
Sbjct: 220 LVNEDGRHVRKIK----AQDPGESCTHEFWIP 247



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 42/254 (16%), Positives = 86/254 (33%), Gaps = 37/254 (14%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGK 270
              ++  F+ +   + +A   D +  R Y +     +   ++   +       F S +  
Sbjct: 36  NYFYQKCFTQDGNNLLFAGDFDGN--RNYYLVDLTTQQATQLTEGKGDNTFGGFISHD-D 92

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL-------------------TNTLFINI-SASYS 310
           RA   V+ +  +++  VDL S   + +                   T  + I I    + 
Sbjct: 93  RAFFYVKNE--LNLIKVDLDSLEEQIIYTVDDEWKGYGTWVANSECTKLVGIEILKRDWQ 150

Query: 311 PDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFS 367
           P +S   F      K   +L  +     + + + QD  A    P++ P     I F    
Sbjct: 151 PLTSWEKFAEFYHTKPTCRLIKVDIQSGELEVVHQD-NAWLGHPIYRPFDDSTIGFCHEG 209

Query: 368 GEKF---AIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSI 421
                   + ++ +DG   R +      ++ T   W P G ++ +     G T   +Y  
Sbjct: 210 PHDLVDARMWLVNEDGRHVRKIKAQDPGESCTHEFWIPDGSAMAYVSYFKGQTERVIYKA 269

Query: 422 DLNG-RNETLINTP 434
           +     NE ++  P
Sbjct: 270 NPETLENEAIMVMP 283



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 13/115 (11%)

Query: 338 QKRISQ----DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             R++          ++   ++  G+ + F           ++     Q   L E     
Sbjct: 23  VTRLTPIDVICHRNYFYQKCFTQDGNNLLFAGDFDGNRNYYLVDLTTQQATQLTEGKGDN 82

Query: 394 AP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
                 S   R+  + + +       L  +DL+   E +I T    +     WV 
Sbjct: 83  TFGGFISHDDRAFFYVKNE-----LNLIKVDLDSLEEQIIYTVDDEWKGYGTWVA 132


>gi|189464668|ref|ZP_03013453.1| hypothetical protein BACINT_01011 [Bacteroides intestinalis DSM
           17393]
 gi|189436942|gb|EDV05927.1| hypothetical protein BACINT_01011 [Bacteroides intestinalis DSM
           17393]
          Length = 743

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 66/209 (31%), Gaps = 58/209 (27%)

Query: 191 NSLCVMDRDGANIRYLT------------PSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           N+L VM  DG   +  T             +   I     +SP    +A+   D+  + +
Sbjct: 181 NNLYVMTNDGQTRQVTTEAEGIVCGQSVHRNEFGINKGTYWSPQGNLLAFYRMDESMVTQ 240

Query: 239 VYLMDTR-------------IDRAPKRIG----------NFRSMILAP--------RFSS 267
             L+D                     ++                   P         ++ 
Sbjct: 241 YPLVDITARIGELNNVRYPMAGMTSHKVTVGIYNTETQKTVYLNTGDPTDRYFTNISWAP 300

Query: 268 NGKRA-LISVQKDEA-MDIYSVDLQSNATERLTNTLFINISASYSP----------DSSQ 315
           + K   LI + +D+    +   + ++     L  TLF      Y            D+++
Sbjct: 301 DAKSIYLIELNRDQNHAKLCQYNTETGE---LMATLFEETHPKYVEPQHPIVFLPWDNNK 357

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQD 344
            +++S R+G   LY+    G   K+++Q 
Sbjct: 358 FIYQSQRDGFNHLYLYNVKGELLKQLTQG 386


>gi|159475928|ref|XP_001696066.1| transcriptional repression protein [Chlamydomonas reinhardtii]
 gi|75331274|sp|Q8W1K8|MUT11_CHLRE RecName: Full=Protein Mut11; AltName: Full=Mut11p
 gi|18139935|gb|AAL60198.1|AF443204_1 WD40-repeat-containing protein [Chlamydomonas reinhardtii]
 gi|158275237|gb|EDP01015.1| transcriptional repression protein [Chlamydomonas reinhardtii]
          Length = 370

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/233 (12%), Positives = 72/233 (30%), Gaps = 20/233 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
               +      + +   +FSP+   +A  + D      V L D         +      +
Sbjct: 30  FRCTHALSGHTKAVAAVKFSPDGSLLASGSADR----TVALWDAATGARVNTLAGHSCGV 85

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               ++ NG+    +   D ++ ++  D ++ A    LT         ++   +  ++  
Sbjct: 86  SDVAWNPNGRYLA-TAADDHSLKLW--DAETGACLRTLTGHTNYVFCCNFDGAAGHLLAS 142

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
              +   +L+          R             +S  G ++  +   G    I +    
Sbjct: 143 GSFDETLRLW--DVRSGRCLREVPAHSDPVTSAAFSYDGSMVVTSSLDG---LIRLWDTQ 197

Query: 380 GSQERLLVEDSNLQAPTWS---PSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                  + D +    +++   P+ + ++ +     D  +KL+     GR   
Sbjct: 198 TGHCLKTLFDRDSPPVSFAAFTPNAKYVLCNTL---DGRAKLWDY-AAGRTRR 246


>gi|325282709|ref|YP_004255250.1| WD repeat-containing protein [Deinococcus proteolyticus MRP]
 gi|324314518|gb|ADY25633.1| WD repeat-containing protein [Deinococcus proteolyticus MRP]
          Length = 266

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 58/198 (29%), Gaps = 34/198 (17%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             + E +FSP+ + +       +    V L D       K   +  S I    F+ +G+R
Sbjct: 53  NAVTESKFSPDGKWLL---NIADGSGYVQLWDVEKGERVKTFLSQSSRIFGADFTPDGQR 109

Query: 272 ALI---------SVQKDEAMDIYSVDLQSNATERLT------NTLFINISASYSPDSSQI 316
            L+           ++   +     +L +   ER+          F +   ++S +  ++
Sbjct: 110 LLLDFSGSKGMADSRRPGYLSPTLWNLAT--LERIAFVYNDKRESFYDGKVTFSTNGERM 167

Query: 317 VFESDREGKEQ-LYVMQSNGSD----------QKRISQDKEASYFDPVWSPQGDLIAFTK 365
            F          + V  +               +  +Q   A   D   SP G  +    
Sbjct: 168 AFIRQSSHSYGPVSVWNAKTGAHIATISRLPYPQGAAQTGGAGSVDARLSPDGSRVLVQY 227

Query: 366 FSGEKFAIGVMKKDGSQE 383
             G    +     +    
Sbjct: 228 VDG---RLAEYDANTGTL 242


>gi|107099495|ref|ZP_01363413.1| hypothetical protein PaerPA_01000507 [Pseudomonas aeruginosa PACS2]
          Length = 493

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 91/249 (36%), Gaps = 37/249 (14%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            PRF  +   +       +    V ++D        R  +  ++   P+FS +G R +  
Sbjct: 123 RPRFEADPLNLFVVVESGDH--HVTILDGDRFEPIARFPSRYALHGGPKFSPDG-RLVYF 179

Query: 276 VQKDEAMDIY-SVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQS 333
             +D  + +Y   +L+  A  R      +N  + + S D   ++  +   G   L ++ +
Sbjct: 180 ASRDGWVTLYDLYNLKVVAEVR----AGLNTRNLAVSDDGRWVLVGNYLPGN--LVLLDA 233

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK---------KDGSQE- 383
                 ++    +A       S       +T      F + +            DG    
Sbjct: 234 RDLSLVQVIPAADAQGQASRVSA-----VYTAPPRHSFVVALKDVHELWELPYADGKPVA 288

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRK--KDG-----DTGSKLYSIDLNGRNETLINTP 434
             RL V D      ++SP  R L+ S +  + G     D+G+++ SI L+G    L +  
Sbjct: 289 PKRLAVADYLDDF-SFSPDYRYLLGSSRQARGGEVIELDSGARVASIPLSGMPH-LGSGI 346

Query: 435 AYASDPQWV 443
            +  D +WV
Sbjct: 347 YWKRDGRWV 355


>gi|332706319|ref|ZP_08426382.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332354868|gb|EGJ34345.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 356

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/314 (14%), Positives = 98/314 (31%), Gaps = 39/314 (12%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GRV+  G  R     +LW +K  ++I   +                  ++Q+   +    
Sbjct: 73  GRVLLSGGSRSDAHLKLWWLKTGREIDSLR------------------VHQTSVSDMAFS 114

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
               +  S     G+        D  G   R     R  +L     + + + +       
Sbjct: 115 ADGTILASVGEDGGVNLWQWNQQDYTGDYTRTFLGHRSNLLSL-AMTSDSKVLV-----T 168

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
             +  + + D R  R    + NF     +       +  + S  K+  + I++++     
Sbjct: 169 GGLDGIRVWDLRNQRPLYTLANFDHPTYSLALHPKAETLV-SGLKNGTIKIWNLN-TGQP 226

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              +     I  + +++P+   +V  S  +GK  + V  +     K              
Sbjct: 227 LYVIRAHQGITSALAFTPNGRTLV-SSGYDGK--IRVWDTKTWQLKYTLAKHTGKIRAIA 283

Query: 354 WSP-QGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            +P  G ++A     G    + +   +  ++   L      +Q+  +S  GR L      
Sbjct: 284 INPVNGTILASASRDG----VRLWNLNTGKQIAWLTGHQDWVQSVAFSRDGRLLA---TG 336

Query: 411 DGDTGSKLYSIDLN 424
             D    ++  +  
Sbjct: 337 GFDRTINIWQANTT 350



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 55/178 (30%), Gaps = 11/178 (6%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAM 282
            ++        ++        R  +  + I    + + A  FS +G+  L    + D  +
Sbjct: 28  SRLGLMVAAIPEMASSQAQSWRTPQLVRTITAHSTAVDALSFSPSGRVLLSGGSRSDAHL 87

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--GSDQKR 340
            ++ +       + L          ++S D + +      +G   L+         D  R
Sbjct: 88  KLWWL-KTGREIDSLRVHQTSVSDMAFSADGTILA-SVGEDGGVNLWQWNQQDYTGDYTR 145

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                 ++      +    ++     +G    I V       +R L   +N   PT+S
Sbjct: 146 TFLGHRSNLLSLAMTSDSKVLV----TGGLDGIRVWDL--RNQRPLYTLANFDHPTYS 197


>gi|301510637|ref|ZP_07235874.1| hypothetical protein AbauAB05_03639 [Acinetobacter baumannii AB058]
          Length = 414

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 80/275 (29%), Gaps = 45/275 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF------ 256
              S          S + + +    Y+ +D        L         + + N       
Sbjct: 141 TVNSHGGHPTHASISLDGKFLFVSNYSAFDKGRGGVAVLPILPNGHLGEMVQNIVFAEGS 200

Query: 257 --------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-- 306
                        +  FS +GK    S   ++ +  +  +      + L      ++S  
Sbjct: 201 GHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYNPS--KPQPLEADKSRDVSFK 258

Query: 307 -------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------QDKEASYF 350
                    +SP+  Q    ++   + ++          K+++           +  S  
Sbjct: 259 HGSGPRHMVFSPNGKQAYITAEM--RSEIVTFNVQDGHLKKVAELKLVHEDKTPEFKSAS 316

Query: 351 DPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS--GRSLIF 406
             + SP G   IA  + +  K  +  ++++G   +  V  +N   P  +S    G+ L  
Sbjct: 317 GIILSPNGKYVIAANRGADNKLLVFKIQQNGLLGQPQVYKANGIEPRAFSFDESGKYLYV 376

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +          L+  D    +   +   A  S P 
Sbjct: 377 TNVYSN--NISLFRFDTKNGSLKPLGDAAKISTPT 409


>gi|224001960|ref|XP_002290652.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974074|gb|EED92404.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 863

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 51/160 (31%), Gaps = 45/160 (28%)

Query: 264 RFSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YSP 311
             S +  R LI        +K    D + +D+ +    +L      N   S      +SP
Sbjct: 161 ALSPDKSRLLIFTNSQKVWRKKTRGDYWVLDITARDLRQL---GGWNAKPSSLMFATFSP 217

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----------------VWS 355
             +++ + S       LYV   +      ++ D  ++  +                  W+
Sbjct: 218 CGNKVAYVS----GNNLYVQDVHTFKITPLTTDGSSTIINGTFDWVYEEEFRLRRGFRWA 273

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           P    IAF            M + G +   L+ +++   P
Sbjct: 274 PDSKSIAF----------WQMDQSGVRVVNLINNTDHLYP 303



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 44/328 (13%), Positives = 99/328 (30%), Gaps = 70/328 (21%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           S+ V     +    V+D    ++R L    ++   L    FSP   KVAY +        
Sbjct: 175 SQKVWRKKTRGDYWVLDITARDLRQLGGWNAKPSSLMFATFSPCGNKVAYVS-----GNN 229

Query: 239 VYLMDTRIDRAPKRIGNFRSMIL----------------APRFSSNGKRALIS-VQKDEA 281
           +Y+ D    +      +  S I+                  R++ + K      + +   
Sbjct: 230 LYVQDVHTFKITPLTTDGSSTIINGTFDWVYEEEFRLRRGFRWAPDSKSIAFWQMDQSGV 289

Query: 282 MDIYSV---DLQSNATERLTNTLFINISASY---------SPDSSQIVFESDREGKEQLY 329
             +  +   D        +        + S           PD      E+   GK  + 
Sbjct: 290 RVVNLINNTDHLYPQLVPIPYPKAGEQNPSCRIGVVAVEREPDDGD-ALEAKATGKRDIG 348

Query: 330 VMQSNGSDQKRISQ------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGS 381
             +++ S    ++        +        W P  + + F + +  +  + V+  +    
Sbjct: 349 SKRADSSAAPAVTWIHLPGDARNHYIASLDWIPNSNELVFQRLNRLQNTVHVVIAEPATG 408

Query: 382 QERLLVEDSNL-----QAPTW----------SPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           + R+   D +      Q+  W             G   ++  +++G    +L+ +D +  
Sbjct: 409 KIRVAFTDRDDAWIDLQSAAWYGEESSGIRFLQEGAQFLWLSERNG--WKQLFLVDRHTG 466

Query: 427 NETLINTPAYAS--------DPQWVGFM 446
             T +  P +          D  W  ++
Sbjct: 467 VSTALTPPTFDVTEIAGVDEDGGWAYYI 494



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 37/105 (35%), Gaps = 16/105 (15%)

Query: 344 DKEASYFDPVWSPQG-DLIAFTK-----FSGEKFAIGVMKKDGSQERLL----VEDSNLQ 393
           D   +  D   SP    L+ FT          +    V+       R L     + S+L 
Sbjct: 152 DTPLAVDDYALSPDKSRLLIFTNSQKVWRKKTRGDYWVLDITARDLRQLGGWNAKPSSLM 211

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             T+SP G  + +        G+ LY  D++    T + T   ++
Sbjct: 212 FATFSPCGNKVAYVS------GNNLYVQDVHTFKITPLTTDGSST 250


>gi|255931543|ref|XP_002557328.1| Pc12g04590 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581947|emb|CAP80086.1| Pc12g04590 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 589

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 51/158 (32%), Gaps = 16/158 (10%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-------ISA 307
           N  S++   RFS +GK                 D+ +           ++        S 
Sbjct: 281 NHDSVVCCVRFSRDGKYLA----TGCNRSAQIFDVTTGQNVATLQDENVDKDGDLYIRSV 336

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SPD   +   ++    +Q+ V   N    K I    E   +   ++  G  IA +   
Sbjct: 337 CFSPDGKYLATGAE---DKQIRVWDINQRTIKHIFSGHEQDIYSLDFAGNGRFIA-SGSG 392

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +   +  +  DG     L  +  +     SP GR + 
Sbjct: 393 DKTVRLWDI-LDGKLVYTLSIEDGVTTVAMSPDGRYVA 429


>gi|45735851|dbj|BAD12886.1| WD-40 repeat protein-like [Oryza sativa Japonica Group]
 gi|45735978|dbj|BAD13007.1| WD-40 repeat protein-like [Oryza sativa Japonica Group]
          Length = 234

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 59/168 (35%), Gaps = 9/168 (5%)

Query: 195 VMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           V D D    + Y     +  +     SP+ +K+A    DD + L   L+D    +    +
Sbjct: 47  VRDYDMERFQLYKHFQFEWPVNHTALSPD-RKLAVIVGDDPNGL---LIDANSGKTLHSL 102

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                   A  +S +G+    +  +D+   I+     S +   L   L    S  ++ D 
Sbjct: 103 KGHFDYSFASAWSPDGRTFA-TGNQDKTCRIWDARNLSKSLHVLRGNLGAIRSIRFTSDG 161

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               F S  E  + ++V        +R   D         +SP  D++
Sbjct: 162 Q---FMSMAEPADFVHVFDVGSDYTRRQELDFFGEISGMSFSPDTDML 206


>gi|50305243|ref|XP_452581.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641714|emb|CAH01432.1| KLLA0C08547p [Kluyveromyces lactis]
          Length = 515

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 67/176 (38%), Gaps = 26/176 (14%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSP 221
           Y+ +   KGDF   ++       +     ++ + +               +++    FSP
Sbjct: 360 YEKVAKRKGDFEELMV-------TASDDFTMYLWNPLKSTKPITRMTGHQKLVNHVAFSP 412

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRALISVQK 278
           + + +  A++D+        +     R  K +  FR  + +     +SS+  R L+S  K
Sbjct: 413 DGRYIVSASFDNS-------IKLWDGRDGKFLSTFRGHVASVYQVAWSSD-CRLLVSCSK 464

Query: 279 DEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           D  + ++  D+++      L        +  +S D  ++       GK+++  + +
Sbjct: 465 DTTLKVW--DVKTRKLSVDLPGHQDEVYTVDWSVDGKRVC----SGGKDKMVRIWT 514



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 43/132 (32%), Gaps = 12/132 (9%)

Query: 234 EDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            D   +YL +  +  +   R+   + ++    FS +G+  + S   D ++ ++       
Sbjct: 378 SDDFTMYLWNPLKSTKPITRMTGHQKLVNHVAFSPDGRYIV-SASFDNSIKLW----DGR 432

Query: 293 ATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
             + L+       S    ++S D   +V  S       L V               +   
Sbjct: 433 DGKFLSTFRGHVASVYQVAWSSDCRLLVSCSK---DTTLKVWDVKTRKLSVDLPGHQDEV 489

Query: 350 FDPVWSPQGDLI 361
           +   WS  G  +
Sbjct: 490 YTVDWSVDGKRV 501



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 63/202 (31%), Gaps = 27/202 (13%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +L+ S D  L    F    +  A      +  L+ Y      ++  KR G+F        
Sbjct: 325 HLSLSTDYALRLGAFDHKGETPASPEEAQQKALKNY------EKVAKRKGDFE------- 371

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
                   +++   D  M +++    +    R+T    +    ++SPD   IV  S    
Sbjct: 372 ------ELMVTASDDFTMYLWNPLKSTKPITRMTGHQKLVNHVAFSPDGRYIVSASF--- 422

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +            +   AS +   WS    L+           + V      +  
Sbjct: 423 DNSIKLWDGRDGKFLSTFRGHVASVYQVAWSSDCRLLVSCSKDTT---LKVWDVKTRKLS 479

Query: 385 LLVEDSNLQAPT--WSPSGRSL 404
           + +     +  T  WS  G+ +
Sbjct: 480 VDLPGHQDEVYTVDWSVDGKRV 501


>gi|254237266|ref|ZP_04930589.1| hypothetical protein PACG_03330 [Pseudomonas aeruginosa C3719]
 gi|126169197|gb|EAZ54708.1| hypothetical protein PACG_03330 [Pseudomonas aeruginosa C3719]
          Length = 493

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/249 (18%), Positives = 91/249 (36%), Gaps = 37/249 (14%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            PRF  +   +       +    V ++D        R  +  ++   P+FS +G R +  
Sbjct: 123 RPRFEADPLNLFVVVESGDH--HVTILDGDRFEPIARFPSRYALHGGPKFSPDG-RLVYF 179

Query: 276 VQKDEAMDIY-SVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQS 333
             +D  + +Y   +L+  A  R      +N  + + S D   ++  +   G   L ++ +
Sbjct: 180 ASRDGWVTLYDLYNLKVVAEVR----AGLNTRNLAVSDDGRWVLVGNYLPGN--LVLLDA 233

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK---------KDGSQE- 383
                 ++    +A       S       +T      F + +            DG    
Sbjct: 234 RDLSLVQVIPAADAQGQASRVSA-----VYTAPPRHSFVVALKDVHELWELPYADGKPVA 288

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRK--KDG-----DTGSKLYSIDLNGRNETLINTP 434
             RL V D      ++SP  R L+ S +  + G     D+G+++ SI L+G    L +  
Sbjct: 289 PKRLAVADYLDDF-SFSPDYRYLLGSSRQARGGEVIELDSGARVASIPLSGMPH-LGSGI 346

Query: 435 AYASDPQWV 443
            +  D +WV
Sbjct: 347 YWKRDGRWV 355


>gi|113475705|ref|YP_721766.1| peptidase S9, prolyl oligopeptidase active site region
           [Trichodesmium erythraeum IMS101]
 gi|110166753|gb|ABG51293.1| peptidase S9, prolyl oligopeptidase active site region
           [Trichodesmium erythraeum IMS101]
          Length = 630

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 79/238 (33%), Gaps = 22/238 (9%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS--S 267
            +    +P+ SP+ + +AY   DD+++L+V++         +   + +  I    ++   
Sbjct: 22  GNPERTKPKISPDGKYLAYIAPDDKNVLQVWVQTIGKQDDRQVTADQKRGIRMYLWTYKP 81

Query: 268 NGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLF-----INISASYSPDSSQIVFES 320
           +  + +       DE   +Y V++QSN    LT         +N+   + PD   +    
Sbjct: 82  D--QLIYLQDAGGDENFHLYQVNIQSNIVRDLTPFQGVKAQIVNLDHCF-PDQILVGMNL 138

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTKFSGEKFAIGVMK 377
                  +Y +  N    +    D +       W+         A          +   +
Sbjct: 139 KNPQSFDVYRIDLNNGAVE---FDTQNPGNIVGWTADAQFQVRAAIASTEDRGSNLFYRE 195

Query: 378 KDGSQERLLVEDSNLQ--APT-WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                   L      +   P  +S  G  +++          +L ++DL    E +I 
Sbjct: 196 TTEKPWETLRHWGPDEQGGPVLFSDDGN-ILYISGNHDANAQRLLALDLRDGQEKVIA 252


>gi|332255192|ref|XP_003276716.1| PREDICTED: WD repeat-containing protein 17 isoform 2 [Nomascus
           leucogenys]
          Length = 1322

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P     +A  T  +      ++ + 
Sbjct: 411 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNG----AFIWNV 466

Query: 245 RIDRAPKRIGNFRSM-ILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R     +  I    +S  + KR       D    I ++D       +      
Sbjct: 467 QKGKIIQRFNEHGTNGIFCIAWSHKDSKRIATCSS-DGFCIIRTID--GKVLHKY-KHPA 522

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 523 AVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGIL 582

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 583 CSGSDDGTVRIWDYTQD 599


>gi|332255190|ref|XP_003276715.1| PREDICTED: WD repeat-containing protein 17 isoform 1 [Nomascus
           leucogenys]
          Length = 1283

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P     +A  T  +      ++ + 
Sbjct: 387 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNG----AFIWNV 442

Query: 245 RIDRAPKRIGNFRSM-ILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R     +  I    +S  + KR       D    I ++D       +      
Sbjct: 443 QKGKIIQRFNEHGTNGIFCIAWSHKDSKRIATCSS-DGFCIIRTID--GKVLHKY-KHPA 498

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 499 AVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGIL 558

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 559 CSGSDDGTVRIWDYTQD 575


>gi|302684427|ref|XP_003031894.1| hypothetical protein SCHCODRAFT_109268 [Schizophyllum commune H4-8]
 gi|300105587|gb|EFI96991.1| hypothetical protein SCHCODRAFT_109268 [Schizophyllum commune H4-8]
          Length = 687

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 61/182 (33%), Gaps = 29/182 (15%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-------SDREGKEQLYVM 331
           D    +  +D  ++A   LT+         +SPD  +I ++       S    +  +   
Sbjct: 153 DVTNSLCVIDTANSAVHPLTHGADFYAQPRFSPDGKRITWQQWYHPDMSWTGSEVYVVDF 212

Query: 332 QSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKFSGEKFAI--GVMKKDGSQERL 385
            ++      I+    A    S   P W+   D I F       +     ++        +
Sbjct: 213 DADNFTANAITHVAGARRKVSVVYPTWAS-ADTILFLSDETGYYQPYKYIVGLGTQPTPV 271

Query: 386 LVE----DSNLQAPTWS---------PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           L E    D N  +P W+           G+  IF+  KDG      + +DL    +  ++
Sbjct: 272 LREPTKFDWNGNSPAWTFGWSFYAALEDGQHAIFTGTKDGRAVF--FLVDLQSGEKHQLD 329

Query: 433 TP 434
            P
Sbjct: 330 IP 331



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 55/172 (31%), Gaps = 29/172 (16%)

Query: 191 NSLCVMDRDGAN------IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           + + V+D D  N             R   +  P ++     +  +          Y++  
Sbjct: 205 SEVYVVDFDADNFTANAITHVAGARRKVSVVYPTWASADTILFLSDETGYYQPYKYIVGL 264

Query: 245 RIDRAP--KRIGNFRSMILAPRFSS---------NGKRALISVQKDEAMDIYSVDLQSNA 293
                P  +    F     +P ++          +G+ A+ +  KD     + VDLQS  
Sbjct: 265 GTQPTPVLREPTKFDWNGNSPAWTFGWSFYAALEDGQHAIFTGTKDGRAVFFLVDLQSGE 324

Query: 294 TERLTNTLFINISASYSP-DS--SQIVFESDREGKEQLYVMQSNGSDQKRIS 342
             +L             P D   S++VF  D         +  +GS   +++
Sbjct: 325 KHQLDIPYVTVDYLRLIPSDGLSSKVVFVGD---------LTDDGSATVQLT 367


>gi|297674711|ref|XP_002815356.1| PREDICTED: WD repeat-containing protein 17-like isoform 2 [Pongo
           abelii]
          Length = 1322

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P     +A  T  +      ++ + 
Sbjct: 411 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNG----AFIWNV 466

Query: 245 RIDRAPKRIGNFRSM-ILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R     +  I    +S  + KR       D    I ++D       +      
Sbjct: 467 QKGKIIQRFNEHGTNGIFCIAWSHKDSKRIATCSS-DGFCIIRTID--GKVLHKY-KHPA 522

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 523 AVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGIL 582

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 583 CSGSDDGTVRIWDYTQD 599


>gi|297674709|ref|XP_002815355.1| PREDICTED: WD repeat-containing protein 17-like isoform 1 [Pongo
           abelii]
          Length = 1283

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P     +A  T  +      ++ + 
Sbjct: 387 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNG----AFIWNV 442

Query: 245 RIDRAPKRIGNFRSM-ILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R     +  I    +S  + KR       D    I ++D       +      
Sbjct: 443 QKGKIIQRFNEHGTNGIFCIAWSHKDSKRIATCSS-DGFCIIRTID--GKVLHKY-KHPA 498

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 499 AVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGIL 558

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 559 CSGSDDGTVRIWDYTQD 575


>gi|297293727|ref|XP_002804306.1| PREDICTED: WD repeat-containing protein 17-like [Macaca mulatta]
          Length = 1188

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P     +A  T  +      ++ + 
Sbjct: 387 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNG----AFIWNV 442

Query: 245 RIDRAPKRIGNFRSM-ILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R     +  I    +S  + KR       D    I ++D       +      
Sbjct: 443 QKGKIIQRFNEHGTNGIFCIAWSHKDSKRIATCSS-DGFCIIRTID--GKVLHKY-KHPA 498

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 499 AVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGIL 558

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 559 CSGSDDGTVRIWDYTQD 575


>gi|288962832|ref|YP_003453126.1| dipeptidyl aminopeptidase [Azospirillum sp. B510]
 gi|288915098|dbj|BAI76582.1| dipeptidyl aminopeptidase [Azospirillum sp. B510]
          Length = 647

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 53/135 (39%), Gaps = 12/135 (8%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           SA  SPD   + + S  EG   +++   +  +  + +++ K+ S     W+     + F+
Sbjct: 24  SAQLSPDGKWLTWLSPHEGVTNVWMAPVDNIAAAEPLTRVKDHSISSYGWTLDSCFVWFS 83

Query: 365 KFSGE--KFAIGVMKKDGSQERLLV------EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           + +     + I ++     + R L        +  +Q+P  +P    ++           
Sbjct: 84  RDNNGDENWHIFIIDLAQRKMRDLTPIDGISAEVEIQSPQ-APD--KIVIGINDRDKRWY 140

Query: 417 KLYSIDLNGRNETLI 431
             Y++D+   N  ++
Sbjct: 141 DYYAVDVKTGNRDIL 155



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/99 (17%), Positives = 36/99 (36%), Gaps = 4/99 (4%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSG 401
              +      SP G  + +         + +   D    ++    V+D ++ +  W+   
Sbjct: 18  GNPTASSAQLSPDGKWLTWLSPHEGVTNVWMAPVDNIAAAEPLTRVKDHSISSYGWTLDS 77

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNET-LINTPAYASD 439
             + FSR  +GD    ++ IDL  R    L      +++
Sbjct: 78  CFVWFSRDNNGDENWHIFIIDLAQRKMRDLTPIDGISAE 116



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 22/193 (11%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISAS 308
           P+R         + + S +GK        +   +++   + +  A E LT     +IS+ 
Sbjct: 12  PRRHLFGNPTASSAQLSPDGKWLTWLSPHEGVTNVWMAPVDNIAAAEPLTRVKDHSISSY 71

Query: 309 -YSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIA 362
            ++ DS  + F  D  G     ++++       + ++     S    + S   P   +I 
Sbjct: 72  GWTLDSCFVWFSRDNNGDENWHIFIIDLAQRKMRDLTPIDGISAEVEIQSPQAPDKIVIG 131

Query: 363 FTKFSGEKFAIGVMKKDGSQERLL---VEDSN------LQAPTWSP----SGRSLIFSRK 409
                   +    +        +L    +            P ++      G S+ +  +
Sbjct: 132 INDRDKRWYDYYAVDVKTGNRDILWLNTQSFFIVRFDWDLKPRFARSAREDGGSICW--R 189

Query: 410 KDGDTGSKLYSID 422
            DG+  +    ID
Sbjct: 190 IDGEAVTHWLDID 202


>gi|266457048|ref|NP_851782.3| WD repeat-containing protein 17 isoform 2 [Homo sapiens]
          Length = 1283

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P     +A  T  +      ++ + 
Sbjct: 387 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNG----AFIWNV 442

Query: 245 RIDRAPKRIGNFRSM-ILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R     +  I    +S  + KR       D    I ++D       +      
Sbjct: 443 QKGKIIQRFNEHGTNGIFCIAWSHKDSKRIATCSS-DGFCIIRTID--GKVLHKY-KHPA 498

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 499 AVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGIL 558

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 559 CSGSDDGTVRIWDYTQD 575


>gi|119625128|gb|EAX04723.1| WD repeat domain 17 [Homo sapiens]
          Length = 1322

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P     +A  T  +      ++ + 
Sbjct: 411 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNG----AFIWNV 466

Query: 245 RIDRAPKRIGNFRSM-ILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R     +  I    +S  + KR       D    I ++D       +      
Sbjct: 467 QKGKIIQRFNEHGTNGIFCIAWSHKDSKRIATCSS-DGFCIIRTID--GKVLHKY-KHPA 522

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 523 AVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGIL 582

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 583 CSGSDDGTVRIWDYTQD 599


>gi|20301994|ref|NP_620205.1| seprase [Rattus norvegicus]
 gi|20136458|gb|AAM11677.1|AF493782_1 fibroblast activation protein alpha subunit [Rattus norvegicus]
 gi|149022116|gb|EDL79010.1| fibroblast activation protein [Rattus norvegicus]
          Length = 761

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 49/160 (30%), Gaps = 34/160 (21%)

Query: 310 SPDSSQIVFESDREGKEQL------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD   I  ESD     +       Y+      +  R   +         WSP G  +A+
Sbjct: 106 SPDRQFIYLESDYSKLWRYSYTATYYIYDLQNGEFVR-GYELPRPIQYLCWSPVGSKLAY 164

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--------------------APTWSPSGRS 403
              +     I + ++ G     +                           A  WSP G+ 
Sbjct: 165 VYQN----NIYLKQRPGDPPFQITYTGRENRIFNGIPDWVYEEEMLATKYALWWSPDGKY 220

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTP---AYASDP 440
           L +    D D     YS   +G+    IN P   A A +P
Sbjct: 221 LAYVEFNDSDIPIIAYSYYGDGQYPRTINIPYPKAGAKNP 260


>gi|31317311|ref|NP_733828.2| WD repeat-containing protein 17 isoform 1 [Homo sapiens]
 gi|215273912|sp|Q8IZU2|WDR17_HUMAN RecName: Full=WD repeat-containing protein 17
 gi|187252475|gb|AAI66623.1| WD repeat domain 17 [synthetic construct]
          Length = 1322

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P     +A  T  +      ++ + 
Sbjct: 411 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNG----AFIWNV 466

Query: 245 RIDRAPKRIGNFRSM-ILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R     +  I    +S  + KR       D    I ++D       +      
Sbjct: 467 QKGKIIQRFNEHGTNGIFCIAWSHKDSKRIATCSS-DGFCIIRTID--GKVLHKY-KHPA 522

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 523 AVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGIL 582

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 583 CSGSDDGTVRIWDYTQD 599


>gi|24753814|gb|AAN64030.1| WD repeat 17 [Homo sapiens]
          Length = 1322

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + +++   ++P     +A  T  +      ++ + 
Sbjct: 411 TASFDGTIKVWDINTLTAVYTSPGNEGVIYSLSWAPGGLNCIAGGTSRNG----AFIWNV 466

Query: 245 RIDRAPKRIGNFRSM-ILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R     +  I    +S  + KR       D    I ++D       +      
Sbjct: 467 QKGKIIQRFNEHGTNGIFCIAWSHKDSKRIATCSS-DGFCIIRTID--GKVLHKY-KHPA 522

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   ++Y + ++     ++     A  F   WSP  + I 
Sbjct: 523 AVFGCDWSQNNKDMIATGCEDTNVRVYYVATSSDQPLKVFSGHTAKVFHVKWSPLREGIL 582

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 583 CSGSDDGTVRIWDYTQD 599


>gi|313677408|ref|YP_004055404.1| ompa/motb domain protein [Marivirga tractuosa DSM 4126]
 gi|312944106|gb|ADR23296.1| OmpA/MotB domain protein [Marivirga tractuosa DSM 4126]
          Length = 680

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/236 (13%), Positives = 74/236 (31%), Gaps = 34/236 (14%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE------A 281
           ++           +    I++ P  I    +   +    S G+  + +            
Sbjct: 188 FSDIYKVKSRGANVDTATIEKLPPIINWSDANEGSVAIDSRGRTMVFARGNTGKRKGLND 247

Query: 282 MDIYSVDLQSNATE-----RLTNTLFINISASYSPDSSQIVFESDREGKEQLY-----VM 331
           +++Y    ++         ++ +    N + ++S D   + F S REG           +
Sbjct: 248 VNLYITRYRNGKWSEPELMKINDPEAWNSTPAFSEDGRTLYFSSTREGGFGGVDLYSATV 307

Query: 332 QSNG--SDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKKDGSQER 384
            S G   + + +    +       P  S  G  + F+        K  I V ++ G +  
Sbjct: 308 NSRGQWGNVRNLGNKINTPEDEMFPSASQDGK-LYFSSNGHPGLGKLDIFVAERKGGKIT 366

Query: 385 L-----LVEDSNLQAPTW--SPSGRSLIFSRKK-DGDTGSKLYSIDLNGRNETLIN 432
           +      +  +      +  SP      FS  +  G+    +Y+      N  ++N
Sbjct: 367 ISHLGKPMNSNKDDFAVFMYSPD--RGFFSSDRPGGEGRDDIYTFKNEDPNLKIVN 420



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 23/152 (15%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID-----RAPKRIG---NFRSM 259
              +     P FS + + + +++  +     V L    ++        + +G   N    
Sbjct: 269 NDPEAWNSTPAFSEDGRTLYFSSTREGGFGGVDLYSATVNSRGQWGNVRNLGNKINTPED 328

Query: 260 ILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATE-----RLTNTLFINISAS-YS 310
            + P  S +GK    S         +DI+  + +          +  N+   + +   YS
Sbjct: 329 EMFPSASQDGK-LYFSSNGHPGLGKLDIFVAERKGGKITISHLGKPMNSNKDDFAVFMYS 387

Query: 311 PDSSQIVFESDR---EGKEQLYVMQSNGSDQK 339
           PD  +  F SDR   EG++ +Y  ++   + K
Sbjct: 388 PD--RGFFSSDRPGGEGRDDIYTFKNEDPNLK 417


>gi|194211284|ref|XP_001914785.1| PREDICTED: similar to Sperm-associated antigen 16 protein (Pf20
           protein homolog) [Equus caballus]
          Length = 628

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/263 (14%), Positives = 77/263 (29%), Gaps = 44/263 (16%)

Query: 103 WNSLG---AQVLVTG--------------RVIKEGKDRLRVEFRLWDVKDRKQII---GK 142
           W  +G   A VL+TG                 K          +LWD+ +   I+   G 
Sbjct: 373 WKVVGLPKANVLLTGFGHTDWLSNCCFHPSGNKLATSSGDTTVKLWDLSNGNCILTLEGH 432

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR----------------ILFVSESVVS 186
                  +W      ++     + +      + R                    S ++++
Sbjct: 433 NHAVWSCTWHSCGDFVASSSLDTTSKIWDVNSERCRCTLYGHTDSVNSIEFFPYSNTLLT 492

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    +L V D                + +  F+P    +A    D   + +++     +
Sbjct: 493 GSADKTLSVWDARTGKCEQSLYGHMHSINDATFAPRGHIIASC--DACGVTKLWDFRKLL 550

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                 +G      +   F  +G+      Q      I+ +DL+S    +L        +
Sbjct: 551 PIVSIDVGPSPGNEV--NFDPSGRVLA---QASGNGVIHLLDLKSGQIHKLMGHESEAHT 605

Query: 307 ASYSPDSSQIVFESDREGKEQLY 329
             +S D   + F    +G  + +
Sbjct: 606 VVFSQDGESL-FSGGSDGTVRTW 627


>gi|149634556|ref|XP_001511993.1| PREDICTED: similar to TBP-associated factor [Ornithorhynchus
           anatinus]
          Length = 623

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 86/267 (32%), Gaps = 13/267 (4%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 295 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKTATDLSLIDKESDDVLERIMDEK 354

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 355 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 410

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +   +FS  G    +S   D    +++ D            L       + P+S+ +   
Sbjct: 411 VWDTQFSPYG-YYFVSGGHDRIARLWATDH-YQPLRIFAGHLADVTCTRFHPNSNYVATG 468

Query: 320 S-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           S DR     + +      +  RI    +       +SP G  +A T  +  +  +  +  
Sbjct: 469 SADRT----VRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLA-TGATDGRVLLWDIGH 523

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 L    + + A  +S  G  L 
Sbjct: 524 GLMVGELKGHTNTVCALKFSRDGEILA 550



 Score = 43.5 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 56/163 (34%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       +IA   + D YQ +    G       +R    S 
Sbjct: 408 NYPVWDT----QFSPYGYYFVSGGHDRIARLWATDHYQPLRIFAGHLADVTCTRFHPNSN 463

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 464 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLAFSPNGRFLATGATDG----RVLLW 519

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +    + + A +FS +G   L S   D  + ++
Sbjct: 520 DIGHGLMVGELKGHTNTVCALKFSRDG-EILASGSMDNTVRMW 561


>gi|108762069|ref|YP_629934.1| S9B family peptidase [Myxococcus xanthus DK 1622]
 gi|108465949|gb|ABF91134.1| peptidase, S9B (dipeptidyl peptidase IV) subfamily [Myxococcus
           xanthus DK 1622]
          Length = 759

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 93/268 (34%), Gaps = 52/268 (19%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMILAPR------------- 264
           +SP+ + +     D   + +V ++D +        +   +S    PR             
Sbjct: 227 WSPDGRFLVVWRDDLRAVHQVPVVDYSSALEKVTTVPYTKSGTPLPRAELHVVEVATGRV 286

Query: 265 ----------------FSSNGKRAL-ISVQKD-EAMDIYSVDLQSNATERL-------TN 299
                           ++  G  AL + + +D + +D+  V+  S     +       T 
Sbjct: 287 TRVPPVEGETYDWFAGWNPEGTEALCLHLSRDAKRLDLSVVEPASGQRRHVLREERPETF 346

Query: 300 TLFINIS-ASYS------PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              ++ +   ++      P     ++ S+R+G   +Y    +G   +++++     +   
Sbjct: 347 VTGLDFAVGGWAKQVTALPGGRGYLWMSERDGWRHVYAYDRSGKRVRQLTRGAFPVHEVV 406

Query: 353 VWSPQGD--LIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS- 407
             +P GD   +  +  SG  +          G   + L   S +   T SPSG+  + + 
Sbjct: 407 GVAPTGDALYVLASADSGAPYEHLFYRGSLKGGALKRLSSASGMHRITPSPSGQYYVDTW 466

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPA 435
             +      +L S++  G+   L  + A
Sbjct: 467 SSRTQPRLRELVSVEG-GKRVRLTTSDA 493



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 82/224 (36%), Gaps = 39/224 (17%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATER 296
           +V       DR  +R    R  ++ PR+   G R +   ++ +    + +   ++   + 
Sbjct: 52  QVQAKLDLADRFVRRAELLRDSLVPPRWLREGDRLVFWSREGKDGGTWVLAHAKTGELKP 111

Query: 297 L------------------TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           L                  T   F ++  + +PD   IVF  +     + + +  +G   
Sbjct: 112 LLSGEQLRQQLSTLLGKPITAPRFFDV--ALAPDERGIVFRLE----GKTFGLGLSGGHV 165

Query: 339 KRISQDKEASYF---DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--- 392
             +S +  A+         +P+G  +A  +  G      V+  +G+       ++NL   
Sbjct: 166 TLLSPEDRAALTLSPQHFLAPKGGALAVQRQGG----FAVLNAEGATVVERTGEANLDWR 221

Query: 393 --QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             + P WSP GR L+  R  D     ++  +D +   E +   P
Sbjct: 222 IPERP-WSPDGRFLVVWRD-DLRAVHQVPVVDYSSALEKVTTVP 263



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 76/192 (39%), Gaps = 38/192 (19%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDL--QSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           +S +G+  ++   +D+   ++ V +   S+A E++T          Y+   + +      
Sbjct: 227 WSPDGRFLVVW--RDDLRAVHQVPVVDYSSALEKVTTVP-------YTKSGTPL------ 271

Query: 323 EGKEQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGD--LIAFTKFSGEKFAIGVMKKD 379
             + +L+V++       R+   + E   +   W+P+G   L        ++  + V++  
Sbjct: 272 -PRAELHVVEVATGRVTRVPPVEGETYDWFAGWNPEGTEALCLHLSRDAKRLDLSVVEPA 330

Query: 380 GSQERLLVEDSNLQAPT---------WS------PSGRSLIFSRKKDGDTGSKLYSIDLN 424
             Q R ++ +   +            W+      P GR  ++  ++DG     +Y+ D +
Sbjct: 331 SGQRRHVLREERPETFVTGLDFAVGGWAKQVTALPGGRGYLWMSERDG--WRHVYAYDRS 388

Query: 425 GRNETLINTPAY 436
           G+    +   A+
Sbjct: 389 GKRVRQLTRGAF 400


>gi|38322722|gb|AAR16275.1| DKFZP434C245-like protein [Takifugu rubripes]
          Length = 432

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 74/202 (36%), Gaps = 13/202 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +       I+    FSP+   VA ++ D      V L    I    K I    + + +  
Sbjct: 12  FRFVGHQDIITGVHFSPSGNLVATSSKDR----TVRLWKPSIKGESKVIKAHTAAVRSVA 67

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G+R   +   D+++ ++SV  +      L         A +SPD+  I    D   
Sbjct: 68  FSHDGQRLA-TASDDKSVKVWSVP-RHCFLYSLNQHTNWVCCARFSPDARLIASCGD--- 122

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +  ++         D   S     ++P G  IA    SG   ++ +     ++  
Sbjct: 123 DRTVRLWDTSSKHCINCFTDYGGSATSVDFNPSGTCIA---SSGSDSSLRIWDLRTNKLI 179

Query: 385 LLVED-SNLQAPTWSPSGRSLI 405
              +  + + + ++ PS   +I
Sbjct: 180 QHYQGRAAVNSFSFHPSSNFMI 201



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 10/158 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y        +   RFSP+ + +A       D   V L DT          ++     +  
Sbjct: 96  YSLNQHTNWVCCARFSPDARLIASC----GDDRTVRLWDTSSKHCINCFTDYGGSATSVD 151

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F+ +G     S   D ++ I+  DL++N   +         S S+ P S+ ++  S    
Sbjct: 152 FNPSGTCIASSGS-DSSLRIW--DLRTNKLIQHYQGRAAVNSFSFHPSSNFMITGSS--- 205

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              + ++              +   F   +S  GDL A
Sbjct: 206 DSTVKILDLLEGRLMYTLHGHKGPVFTVAFSRGGDLFA 243


>gi|70983676|ref|XP_747365.1| WD repeat protein [Aspergillus fumigatus Af293]
 gi|66844991|gb|EAL85327.1| WD repeat protein [Aspergillus fumigatus Af293]
 gi|159123630|gb|EDP48749.1| WD repeat protein [Aspergillus fumigatus A1163]
          Length = 824

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 59/160 (36%), Gaps = 10/160 (6%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSL------CVMDRDGANIRYLTPSRDQILFEP 217
           ++ T       SR +  + +   G ++  +       V++ D               F  
Sbjct: 600 ETNTFIADHELSRAINCTATSPDGRLRVVIGDSPDAWVVEADTGRPVQPLRGHRDFGFAC 659

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ + +A +  D      V + D R  R  + I +  +   + RFS  G      + 
Sbjct: 660 AWSPDMRHIATSNQDK----TVIIWDARTWRILQTIESDVAGYRSVRFSPVGGGPRTLLL 715

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            + A  I  V+ Q+  T ++ +       A +SP+ S I 
Sbjct: 716 AEPADRIAIVNAQTYQTRQVHDFFGEIGGADFSPEGSTIW 755



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 38/100 (38%), Gaps = 5/100 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +  IN +A+ SPD    V   D       +V++++     +  +      F   WSP   
Sbjct: 611 SRAINCTAT-SPDGRLRVVIGD---SPDAWVVEADTGRPVQPLRGHRDFGFACAWSPDMR 666

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            IA T    +   I   +     + +  + +  ++  +SP
Sbjct: 667 HIA-TSNQDKTVIIWDARTWRILQTIESDVAGYRSVRFSP 705


>gi|333024632|ref|ZP_08452696.1| putative peptidase [Streptomyces sp. Tu6071]
 gi|332744484|gb|EGJ74925.1| putative peptidase [Streptomyces sp. Tu6071]
          Length = 712

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 51/167 (30%), Gaps = 36/167 (21%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQ---LYVMQS--NGSDQKRISQDKEASYFDPV- 353
           TL    S + +PD S+IVF   R G ++   L+V+    +G   +R+  D  A       
Sbjct: 19  TLGAPRSLTVAPDGSRIVFLRSRSGTDRSQMLWVLDVTEDGKSAERLLADPAALLGAGGE 78

Query: 354 ----------------------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                                 ++   +    T        +          R L     
Sbjct: 79  RLSARERARRERARESAAGIVGYASDAE--VSTAVYALSGRLWTTDLRSGASRALAVPGP 136

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +  P  SP G  + +  +        L  +D +G  +  +  P  A 
Sbjct: 137 VIDPRLSPDGSMIAYVSE------GALRLVDADGNGDRALAAPEEAQ 177



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 68/217 (31%), Gaps = 42/217 (19%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------- 264
             + +PR SP+   +AY +     ++       R   AP+       +            
Sbjct: 135 GPVIDPRLSPDGSMIAYVSEGALRLVDADGNGDRALAAPEEAQVTYGLAEFVAAEEMDRT 194

Query: 265 ----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               ++ +  R L++   +  +  +           + +    +   S            
Sbjct: 195 RGFWWAPDSARLLVARVDESPVQRWW----------IADPAHPDREPS--------AIAY 236

Query: 321 DREGKE----QLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGV 375
            R G      +L++    G   + +       Y   V WS  G  +   +   ++  + +
Sbjct: 237 PRAGTANADVRLFLHDLEGGRTEVVWDRVRYPYLARVHWSAAGAPLLLVQSRDQRAVLYL 296

Query: 376 -MKKDGSQERLLVEDSNLQ-------APTWSPSGRSL 404
            + ++    R++  D +         +P W+P G+ +
Sbjct: 297 GVDEESGATRMVHADEDPDWVELRGGSPAWTPDGKLV 333


>gi|313675605|ref|YP_004053601.1| peptidase s9b dipeptidylpeptidase iv domain protein [Marivirga
           tractuosa DSM 4126]
 gi|312942303|gb|ADR21493.1| peptidase S9B dipeptidylpeptidase IV domain protein [Marivirga
           tractuosa DSM 4126]
          Length = 732

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/254 (12%), Positives = 88/254 (34%), Gaps = 47/254 (18%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDR-------APKRIGNFRSMILA--------- 262
           +S + + +A+   D+ ++    + D +           P+      ++ +          
Sbjct: 206 WSHDSEYIAFWQSDEREVPIFQMTDYQGTHKEWVKLPYPQVGDTNPTVKIGVINVAEKSK 265

Query: 263 ------------PR--FSSNGKRALISV--QKDEAMDIYSVDLQSNATERL---TNTLFI 303
                       PR  +++  ++  +    +    M +Y  D  S   + +   ++  +I
Sbjct: 266 EWMQVPLEDGYIPRIYWTAEKEKLAVMHLNRAQTNMKLYMADATSGKAKMILEESSDAWI 325

Query: 304 NIS---------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           ++          A +  D+ +  + +D++G   LY     G  Q ++++      +    
Sbjct: 326 DVFDFFAGIMHYAFFPKDAKEFFWITDKDGYAHLYRYNYEGKLQNQVTKGDWEVVYVHAV 385

Query: 355 SPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             +   I ++       +  + V+  +G  ++ + E         +P     +  R  D 
Sbjct: 386 DSKKKKIYYSSTEDSPLERQLYVVNFNGRGKKKVTEMEGRHNIDMAPEATYFV-DRYSDV 444

Query: 413 DTGSKLYSIDLNGR 426
            T +K+   D +G+
Sbjct: 445 KTPTKIELRDASGK 458



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 78/245 (31%), Gaps = 49/245 (20%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           + ++    E        +      P    +  S I    + ++G+    + + +    I 
Sbjct: 11  ITFSLQAQEKQTFSSFQEAMSGIRPMYGNSGPSNI---NWINDGQAYSFTERGENGAQII 67

Query: 286 -SVDLQSNATERLTNTLFINISAS----------YSPDSSQIVFESD------REGKEQL 328
            S + ++   + + +T  + +  S          +S DS  ++F+++      R G    
Sbjct: 68  KSFNPKTQEEKLIFSTEGMKVPGSEDAFQYASFQWSDDSKYLLFQTNFRPVWRRSGISDY 127

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           Y           +++D + +      SP G  + + +       + V      +E  L +
Sbjct: 128 YYYSIEDKTLDLVAKDAQTAEL----SPNGKKVGYER----GGNLFVFDLASKEETQLTD 179

Query: 389 D------------------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNET 429
           D                     QA  WS     + F   +  +    ++ + D  G ++ 
Sbjct: 180 DAEDGFYNGRFGWAYEEEFGLAQAWEWSHDSEYIAF--WQSDEREVPIFQMTDYQGTHKE 237

Query: 430 LINTP 434
            +  P
Sbjct: 238 WVKLP 242


>gi|302556544|ref|ZP_07308886.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302474162|gb|EFL37255.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 1465

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/255 (13%), Positives = 81/255 (31%), Gaps = 38/255 (14%)

Query: 194 CVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            +   D   +  ++    +  +     S +    A      ++      +     R  + 
Sbjct: 742 MLRRYDQFKDAAWVLTGTEGRIKNAATSVDG---AVTLATSDNGRATLFVRQAGGRTQRV 798

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----- 307
             +   M+  P  S +G+R       D  +  + ++L ++  E L      ++SA     
Sbjct: 799 QLSHDEMVFVPLVSRDGRRIAYLSATDTVVW-HDIELTADKPEDLL-GPAHDLSAAEFKA 856

Query: 308 ---------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                          ++SPD++++   S      +L++        + +     + Y   
Sbjct: 857 MSGLAEIMSEDVNLMAFSPDANELAAIS----GSRLHLWDLATGRHRNVPGQMSSGYDAV 912

Query: 353 VWSPQGDLIAF---TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP-----SGRSL 404
            +      +            +A+  M  D    R L +D N  +   SP      G  L
Sbjct: 913 WFGQDKKTLVVQNGISAGVSTYAVTTMDVDTGAVRKLADDVNTNSMYGSPVGLSGDGTVL 972

Query: 405 IFSRKKDGDTGSKLY 419
           +  R+ +    +K+Y
Sbjct: 973 VVCREAEQGDDTKVY 987


>gi|301769819|ref|XP_002920327.1| PREDICTED: apoptotic protease-activating factor 1-like isoform 4
           [Ailuropoda melanoleuca]
          Length = 1195

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 78/234 (33%), Gaps = 29/234 (12%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       ++   FS + Q++A    D      + +           I      +L  
Sbjct: 597 RLVVRPHTDAVYHACFSEDGQRIASCGVDK----TLQVFKAETGEKLLEIKAHEDEVLCC 652

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS++ +    +   D+ + I+  +  +     + +     ++  +  ++S  +  +   
Sbjct: 653 AFSTDDRFIA-TCSVDKKVKIW--NSMTGELVHIYDEHSEQVNCCHFTNNSHYLLLATAS 709

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L +   N  + +        S     +SP   L+A     G    + +     + E
Sbjct: 710 SDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGT---LKLWDVKSANE 766

Query: 384 R--LLVEDS--NLQAP-----------TWSPSGRSLIFSRKKDGDTGSKLYSID 422
           R  + V+    N + P           +WSP G  ++ + K        L+++D
Sbjct: 767 RKSINVKQFFLNSEEPQEDMEVIVKCCSWSPDGARIMVAAKNK----IFLWNMD 816


>gi|301769817|ref|XP_002920326.1| PREDICTED: apoptotic protease-activating factor 1-like isoform 3
           [Ailuropoda melanoleuca]
          Length = 1207

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 78/234 (33%), Gaps = 29/234 (12%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       ++   FS + Q++A    D      + +           I      +L  
Sbjct: 609 RLVVRPHTDAVYHACFSEDGQRIASCGVDK----TLQVFKAETGEKLLEIKAHEDEVLCC 664

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS++ +    +   D+ + I+  +  +     + +     ++  +  ++S  +  +   
Sbjct: 665 AFSTDDRFIA-TCSVDKKVKIW--NSMTGELVHIYDEHSEQVNCCHFTNNSHYLLLATAS 721

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L +   N  + +        S     +SP   L+A     G    + +     + E
Sbjct: 722 SDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGT---LKLWDVKSANE 778

Query: 384 R--LLVEDS--NLQAP-----------TWSPSGRSLIFSRKKDGDTGSKLYSID 422
           R  + V+    N + P           +WSP G  ++ + K        L+++D
Sbjct: 779 RKSINVKQFFLNSEEPQEDMEVIVKCCSWSPDGARIMVAAKNK----IFLWNMD 828


>gi|302820950|ref|XP_002992140.1| hypothetical protein SELMODRAFT_430340 [Selaginella moellendorffii]
 gi|300140066|gb|EFJ06795.1| hypothetical protein SELMODRAFT_430340 [Selaginella moellendorffii]
          Length = 762

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 79/249 (31%), Gaps = 33/249 (13%)

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
               RL+D      +  K  +S+    R     I              F      V  S 
Sbjct: 528 DASIRLYDTATATPM--KTLYSA----RYGVDHIC-------------FTHHTNAVIFSS 568

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +G  ++   +   D   +RY      ++      + +QQ + +A   +   ++++   +
Sbjct: 569 SNGSDESLRYLSLYDNRFLRYFRGHTQRVRGRLSVAYDQQGLVFAVAMEGGAIKLFDGRS 628

Query: 245 RIDRA--PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTL 301
                     +G   + +   +FS++GK  L+S        +Y +D          T   
Sbjct: 629 FDKGPFDTFLVGGDTAEVAGMKFSNDGKMMLLSTT---NSRVYLLDAYSGKKMHGFTLKP 685

Query: 302 FINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             +     AS+SPD   ++  S   G   L +  S    +     +         W+P  
Sbjct: 686 SRDGETLEASFSPDGRYVISGS---GDGSLRIWSSLSGAEVACWTNNAGIPAVVKWAP-- 740

Query: 359 DLIAFTKFS 367
             + F   S
Sbjct: 741 RRLMFATAS 749


>gi|195386418|ref|XP_002051901.1| GJ24581 [Drosophila virilis]
 gi|194148358|gb|EDW64056.1| GJ24581 [Drosophila virilis]
          Length = 347

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/295 (13%), Positives = 90/295 (30%), Gaps = 28/295 (9%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG--ANIRYLTPSRDQILFEPRF 219
           I Q    E   F +      E ++S      L +    G   NI  ++      + E  F
Sbjct: 48  IMQLEGHEGEIFTTEFHPEGEMLLSSGFDRQLYIWQVYGDCENIMAMS-GHSGAVMEAHF 106

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P+   +   + D      + + D    +  +R+    + + + + S  G++ L S   D
Sbjct: 107 TPDGSHIFTCSTDK----TLAIWDIVTGQRVRRLKGHSNFVNSVQGSRRGQQLLCSGSDD 162

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             + I+  D +      +  + +   +  +   S Q++         +L +         
Sbjct: 163 RTIRIW--DARKKQAAHVLESPYQLTAVCFGDTSEQVI---SGGIDNELKIWDIRKQQVL 217

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQA--- 394
              +    +      SP+GD +           + +      G +   + +         
Sbjct: 218 HHLRGHTDTITAVALSPEGDFVLTNAMDNTLRVWDVRAYAP-GERCVKVFQGHQHNFEKN 276

Query: 395 ---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE--TLINTPAYASDPQWVG 444
                W+P G  +       G     +Y  D+N R     L       +D  +  
Sbjct: 277 LLRCAWAPGGDKI-----SAGSADRHVYVWDVNTRRILYKLPGHNGSVNDVDFSP 326


>gi|153003820|ref|YP_001378145.1| peptidase S9 prolyl oligopeptidase [Anaeromyxobacter sp. Fw109-5]
 gi|152027393|gb|ABS25161.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Anaeromyxobacter sp. Fw109-5]
          Length = 706

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 34/101 (33%), Gaps = 9/101 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVEDSNLQAPT--WSPS 400
            +        SP G  +AF +       + V   D    Q + +  D+    P   WS  
Sbjct: 63  GDPEISGARLSPDGAWLAFLRPLDGTRNVWVKPVDAPFEQAKPVTADTARPVPAYFWSWD 122

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            R ++F + + GD    ++++D           P     P 
Sbjct: 123 SRFILFVQDRGGDENFDVFAVD-----PRAPPGPGAKVPPA 158



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 61/195 (31%), Gaps = 18/195 (9%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTNTLFINISA- 307
           + +      I   R S +G         D   +++   VD      + +T      + A 
Sbjct: 58  RELIFGDPEISGARLSPDGAWLAFLRPLDGTRNVWVKPVDAPFEQAKPVTADTARPVPAY 117

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGS----------DQKRISQDKEAS---YFDPVW 354
            +S DS  I+F  DR G E   V   +              + +++ K      Y  P  
Sbjct: 118 FWSWDSRFILFVQDRGGDENFDVFAVDPRAPPGPGAKVPPARGLTELKGVRAEIYEVPKA 177

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            P    +           +  ++    +  LL   D    + T+   GR L    +    
Sbjct: 178 RPGIVYVGLNDRDARWHDLYEIEIATGKRTLLRRNDQRFVSWTFDLDGR-LRLGTRVTEQ 236

Query: 414 TGSKLYSIDLNGRNE 428
             +++  +D  G  +
Sbjct: 237 GDTEILRVDPAGMKK 251


>gi|160876947|ref|YP_001556263.1| peptidase S9B dipeptidylpeptidase IV subunit [Shewanella baltica
           OS195]
 gi|160862469|gb|ABX51003.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           baltica OS195]
 gi|315269152|gb|ADT96005.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           baltica OS678]
          Length = 771

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 72/255 (28%), Gaps = 64/255 (25%)

Query: 210 RDQILFEPRFSPNQQK----VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           ++++ + P  S   +     +A         +    +        K       M  +P  
Sbjct: 3   KNRLTWFPACSLKVRAVPLLIASQMAMISTAMISTTIPALAMEGGKLPLTIERMNASPAL 62

Query: 266 ----------SSNGKRALISVQKDEA---MDIYSVDLQSNATERL-------TNTLFINI 305
                     S +G R      + +     D++ +D++S  +  L       TN L    
Sbjct: 63  AGSSPRGLKLSPDGLRVTYLAGRKDNQSFYDLWQMDVKSGESSLLLNADKLATNELSDEE 122

Query: 306 SAS--------------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            A               +  D SQ +          LY      +   ++    E    D
Sbjct: 123 KARRERQRIYGEGIMEYFWADDSQALLI---PASGNLYYFSLVDNSVTQL-PIGEGFATD 178

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQ 393
              SP+G  ++F +       + V+     + +++  D                    + 
Sbjct: 179 ARLSPKGHFVSFVRDQ----NLYVLDLATKKLQVMTTDGGGVIKNAMAEFVAQEEMDRMT 234

Query: 394 APTWSPSGRSLIFSR 408
              W+P   ++ F R
Sbjct: 235 GYWWAPDESAIAFIR 249



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 47/331 (14%), Positives = 108/331 (32%), Gaps = 72/331 (21%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS---DDIYQSITGEKGDFNSRILFVSESV 184
           F L D    +  IG+ F ++ A      H +S   D     +     D  ++ L V  + 
Sbjct: 159 FSLVDNSVTQLPIGEGF-ATDARLSPKGHFVSFVRDQNLYVL-----DLATKKLQVMTTD 212

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-----V 239
             G+IKN++           ++       +    ++P++  +A+   D+  + +     +
Sbjct: 213 GGGVIKNAM---------AEFVAQEEMDRMTGYWWAPDESAIAFIRIDESAVEQVTRNEI 263

Query: 240 YLMDTRIDRAPKRIGNFRSMILA------------------------------PR--FSS 267
           Y    ++           ++ +A                              PR  +  
Sbjct: 264 YADGIKLTEQRYPAAGKNNVDIALGVVTLKDKAINWVSLREENSKEKSKDIYLPRVDWLP 323

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----------FINISASYSPDSSQI 316
           + K      Q   + D + +DLQ  A + LT               +N    +    S  
Sbjct: 324 DSKHLSFQWQ---SRDQHQLDLQLVALDALTKPKTLVKERSDAWVNLNNDLHFLKQQSAF 380

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IG 374
           ++ S+R+G   LY+    G  + ++++ + A             + FT          + 
Sbjct: 381 IWASERDGFNHLYLFDLKGKLKTQLTKGEWAVDELEYIDETAGWVYFTGSKDTPIEKQLY 440

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +   G +   + + + +  P ++   +S+ 
Sbjct: 441 RVPLAGGKVERVSKQAGMHNPVFA-DNQSVY 470



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 70/224 (31%), Gaps = 46/224 (20%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--- 302
           +D +  ++          R S  G        ++    +Y +DL +   + +T       
Sbjct: 162 VDNSVTQLPIGEGFATDARLSPKGHFVSFVRDQN----LYVLDLATKKLQVMTTDGGGVI 217

Query: 303 --------------INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                               ++PD S I F            ++ + S  +++++++  +
Sbjct: 218 KNAMAEFVAQEEMDRMTGYWWAPDESAIAF------------IRIDESAVEQVTRNEIYA 265

Query: 349 YF----DPVWSPQGDL---IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                 +  +   G     IA    + +  AI  +       +   +D  L    W P  
Sbjct: 266 DGIKLTEQRYPAAGKNNVDIALGVVTLKDKAINWVSLREENSKEKSKDIYLPRVDWLPDS 325

Query: 402 RSLIF--SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           + L F    +       +L ++D   + +TL+          WV
Sbjct: 326 KHLSFQWQSRDQHQLDLQLVALDALTKPKTLVK----ERSDAWV 365


>gi|114571602|ref|YP_758282.1| peptidase S9 prolyl oligopeptidase [Maricaulis maris MCS10]
 gi|114342064|gb|ABI67344.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Maricaulis maris MCS10]
          Length = 688

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 64/198 (32%), Gaps = 31/198 (15%)

Query: 264 RFSSNGKRALIS---VQKDEAMDIYSVDLQS---NATERLTNTLFINISASYSPDSSQIV 317
           R S +G+  L+    +       I   DL     +A  R++          ++ D   ++
Sbjct: 59  RLSPSGRYLLMVEKPLHNGGDDTILVYDLDGEGGSAGRRVSVGNRRIDWVEWANDDRFLI 118

Query: 318 FESDRE---------GKEQLY-------VMQSNGSDQKRISQDKEA-SYFDPVWSP---- 356
             S R          G+ QL         +  +   +  +  D E  ++++P  SP    
Sbjct: 119 AISARNVRVTLRRERGRYQLVASQSRVLTIDRDSLQRVSVLFDGEGENFWNPNRSPITDF 178

Query: 357 ---QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI-FSRKKDG 412
                D I    +    + +  +  +      +   ++     +S +G +++     + G
Sbjct: 179 LPDDPDHILMPSYERRNYNLYRVNIETGSAERIERGNDATVAWFSANGEAVMRVDSSRRG 238

Query: 413 DTGSKLYSIDLNGRNETL 430
           +          NGR   +
Sbjct: 239 EHMRFHARTGRNGRWRRV 256


>gi|153832137|ref|ZP_01984804.1| putative lipoprotein [Vibrio harveyi HY01]
 gi|148871752|gb|EDL70593.1| putative lipoprotein [Vibrio harveyi HY01]
          Length = 411

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 57/169 (33%), Gaps = 18/169 (10%)

Query: 257 RSMILAPR--FSSNGKRALISVQKDEAMDIYSVDLQSNATER---------LTNTLFIN- 304
           R  +  PR  + S     + S    +     ++ ++     R         L++    + 
Sbjct: 56  RKDVTGPRCKWQSEHNFIVYSEDLSKPEYPGTLPVKPGYAVRRAKEWPREDLSDASSYDK 115

Query: 305 --ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW----SPQG 358
             I   ++   S+    +D E   +++ M+ +G+D + ++ D  ++     +    SP  
Sbjct: 116 PRIQFWWNNVGSRDPLVNDYENGYKIWSMKIDGTDLRLVTDDMPSTASPQNFTMSRSPNN 175

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
             +A+    GE     +      Q   L          W+     + FS
Sbjct: 176 RYVAYAYSYGEPLIKAIFDLKTQQTIQLGSARTKPYLVWADDSSYIYFS 224



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 50/155 (32%), Gaps = 25/155 (16%)

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-----------T 364
           IV+  D    E    +        R +++          S     I F            
Sbjct: 73  IVYSEDLSKPEYPGTLPVKPGYAVRRAKEWPREDLSDASSYDKPRIQFWWNNVGSRDPLV 132

Query: 365 KFSGEKFAIGVMKKDGSQERLLVED-SNLQAP-----TWSPSGRSLIFSRKKDGDTGSKL 418
                 + I  MK DG+  RL+ +D  +  +P     + SP+ R + ++          +
Sbjct: 133 NDYENGYKIWSMKIDGTDLRLVTDDMPSTASPQNFTMSRSPNNRYVAYAYSYGEPLIKAI 192

Query: 419 YSIDLNGRNETLINTPA------YASDPQWVGFMD 447
           +  DL  +    + +        +A D  ++ F D
Sbjct: 193 F--DLKTQQTIQLGSARTKPYLVWADDSSYIYFSD 225


>gi|282900553|ref|ZP_06308495.1| WD-40 repeat protein [Cylindrospermopsis raciborskii CS-505]
 gi|281194353|gb|EFA69308.1| WD-40 repeat protein [Cylindrospermopsis raciborskii CS-505]
          Length = 357

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 64/189 (33%), Gaps = 18/189 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S +  K+A  +   E I+      T +  +  +  +         FS++ +   +  Q
Sbjct: 27  NWSKSGHKLAVTSASGEVIIWENQTITNLQTSTGKSLDCGG------FSADDQYLAVGGQ 80

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + I+    +     + L N        +++  ++ + F   R     + V   +  
Sbjct: 81  -DGNVKIW----KDKELIQTLANAPAWIDKLAWNHTNNLLAFSLGR----YVQVWDVDAR 131

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +       + +S     W   G  +A + + G    +   +    +  +L  D+      
Sbjct: 132 ELVVTLNFENSSILGIDWRRDGKYLAISGYKG--VKVWNRENWDEEPYILYTDTVSTGVA 189

Query: 397 WSPSGRSLI 405
           WS  G+ L 
Sbjct: 190 WSSDGKYLA 198



 Score = 36.9 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 36/114 (31%), Gaps = 12/114 (10%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             + V D D   +       +  +    +  + + +A + Y       V + +       
Sbjct: 121 RYVQVWDVDARELVVTLNFENSSILGIDWRRDGKYLAISGYKG-----VKVWNRENWDEE 175

Query: 251 KRIGNFRSMILAPRFSSNGKRAL-------ISVQKDEAMDIYSVDLQSNATERL 297
             I    ++     +SS+GK          I+V + E  D + +        +L
Sbjct: 176 PYILYTDTVSTGVAWSSDGKYLASANMDRSIAVLEWENPDPWLMRGFPGKIRQL 229


>gi|168019050|ref|XP_001762058.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686775|gb|EDQ73162.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 468

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 71/192 (36%), Gaps = 15/192 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+ +   Y          V            +I      I+  R+S + +  L + + 
Sbjct: 55  WAPDSE---YLLCGLFKRAIVQAWSVSQSEWTCKIDEGSIGIVHARWSPDSRHILTTSEF 111

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++S  L S A   +        + S+S D   I   + R+ ++ ++++   G + 
Sbjct: 112 QLRLTVWS--LVSTACVHVPWPKHATKALSFSKDGKYIAIGTRRDCRDYVHLLACQGWEA 169

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ----- 393
               +       D  WSP    IA    S  ++ + V   DG   R L + +  +     
Sbjct: 170 MGNFEVGTTDLADLEWSPNDSTIA-VWDSPLEYKVLVYSPDG---RCLFKYAAYENALGV 225

Query: 394 -APTWSPSGRSL 404
            + TWSP G+ L
Sbjct: 226 KSATWSPCGQFL 237



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 57/165 (34%), Gaps = 13/165 (7%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                 +   R+SP+ + +   +   E  LR+ +           +   +    A  FS 
Sbjct: 87  DEGSIGIVHARWSPDSRHILTTS---EFQLRLTVWSLVSTACVH-VPWPKHATKALSFSK 142

Query: 268 NGKRALISVQKDEAMDIYSVDLQS----NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           +GK   I  ++D    ++ +  Q        E  T  L  ++   +SP+ S I    D  
Sbjct: 143 DGKYIAIGTRRDCRDYVHLLACQGWEAMGNFEVGTTDLA-DLE--WSPNDSTIA-VWDSP 198

Query: 324 GKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + ++ V   +G    K  + +         WSP G  +    + 
Sbjct: 199 LEYKVLVYSPDGRCLFKYAAYENALGVKSATWSPCGQFLGVGSYD 243


>gi|149920848|ref|ZP_01909311.1| hypothetical protein PPSIR1_38589 [Plesiocystis pacifica SIR-1]
 gi|149818366|gb|EDM77818.1| hypothetical protein PPSIR1_38589 [Plesiocystis pacifica SIR-1]
          Length = 353

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/264 (11%), Positives = 77/264 (29%), Gaps = 34/264 (12%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R+    +PRF P +   A+      +           D    ++ +  +   +      G
Sbjct: 92  REGYDNQPRFVPGEGGGAFLFTSVREGQSDIYRYALPDGPATQVTDTPANEYSATPLPGG 151

Query: 270 K-RALISVQKDEAMDIYSVDLQSNATERLTN-------TLFINISASYSPDSSQIVFESD 321
                +  + D    ++    +     +L +         +++  A ++       F   
Sbjct: 152 AGSISVIRELDGVQQLWRYGPEGQDRGQLFDALVAVGYHQWLDAEARWA-----AFFLVG 206

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +G     V       +  +  +        +  P  + ++FT+       I        
Sbjct: 207 EDGAANTLVHARAPGREPALIAEDPGRCLAMI--PGREAMSFTRVGDAGVEIAAYDLATG 264

Query: 382 QERLLVED-----SNLQAPTWSPSGRSLI-----FSRKKDGDTGSKL-------YSIDLN 424
              ++        +  Q   W+P G  L+       R ++G    +L        ++ + 
Sbjct: 265 SSEVITPTVTPAATETQDYAWAPDGSVLMGDGAALWRWREGLGWKRLELEAAPGAALPIA 324

Query: 425 GRNETLINT--PAYASDPQWVGFM 446
           G++ T I         D  W+  +
Sbjct: 325 GQSITRIALSEAGPNGDGLWIALV 348



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 75/222 (33%), Gaps = 19/222 (8%)

Query: 239 VYLMDTRIDRAPKRIGNFR------SMILAPRFSSN--GKRALISVQKDEAMDIYSVDLQ 290
           +YL          R+   R           PRF     G   L +  ++   DIY   L 
Sbjct: 69  IYLGRLDARGEAWRVTALRNATAREGYDNQPRFVPGEGGGAFLFTSVREGQSDIYRYALP 128

Query: 291 SNATERLTNTLFINISASYSPDS-SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                ++T+T     SA+  P     I    + +G +QL+     G D+ ++     A  
Sbjct: 129 DGPATQVTDTPANEYSATPLPGGAGSISVIRELDGVQQLWRYGPEGQDRGQLFDALVAVG 188

Query: 350 FDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +      +    AF      G    +   +  G +  L+ ED         P GR  + S
Sbjct: 189 YHQWLDAEARWAAFFLVGEDGAANTLVHARAPGREPALIAEDPGRCL-AMIP-GREAM-S 245

Query: 408 RKKDGDTGSKLYSIDL-NGRNETLINT----PAYASDPQWVG 444
             + GD G ++ + DL  G +E +  T         D  W  
Sbjct: 246 FTRVGDAGVEIAAYDLATGSSEVITPTVTPAATETQDYAWAP 287


>gi|307210939|gb|EFN87254.1| Putative actin-interacting protein 1 [Harpegnathos saltator]
          Length = 630

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 82/244 (33%), Gaps = 14/244 (5%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           NS+ + + D   I  +       +   ++SP+   +A  + D    +R++    +     
Sbjct: 72  NSVIIRNIDNPAIADVYTEHSCSVIVAKYSPSGFYIA--SGDQSGKVRIWDTVNKEHILK 129

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASY 309
               +    I    +S + +R ++  +  E      +     +   ++  +  IN S  +
Sbjct: 130 NEYHSIGGPIKDIAWSPDSQRMVVVGEGREKFGHVFMAETGTSVGEISGQSKSIN-SCDF 188

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P     +     +    + V +      K   QD         +SP G+L A   F G+
Sbjct: 189 RPARPFRLITGSED--NTIAVFEGPPFKFKMTKQDHTRFVQAVRYSPDGNLFASGGFDGK 246

Query: 370 KFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            F    +  D   +         +    W P G  L+ +    GD   KL+ +       
Sbjct: 247 VFIYNGVTSDLVGELGPPAHQGGVYGVAWKPDGTQLLTAS---GDKTCKLWDV----ETR 299

Query: 429 TLIN 432
           TLI 
Sbjct: 300 TLIT 303



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 37/293 (12%), Positives = 90/293 (30%), Gaps = 47/293 (16%)

Query: 111 LVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFS----------SPASWR---- 152
           ++  +    G          + R+WD  +++ I+  ++ S          SP S R    
Sbjct: 95  VIVAKYSPSGFYIASGDQSGKVRIWDTVNKEHILKNEYHSIGGPIKDIAWSPDSQRMVVV 154

Query: 153 -----KIAHTISDDIYQSITGEKGDFNSRIL-----FVSESVVSGIIKNSLCVMDRDGAN 202
                K  H    +   S+    G   S             +++G   N++ V +     
Sbjct: 155 GEGREKFGHVFMAETGTSVGEISGQSKSINSCDFRPARPFRLITGSEDNTIAVFEGPPFK 214

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +       + +   R+SP+     +A+   +  + +Y   T            +  +  
Sbjct: 215 FKMTKQDHTRFVQAVRYSPDGN--LFASGGFDGKVFIYNGVTSDLVGELGPPAHQGGVYG 272

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFIN---ISASYSPDSSQI 316
             +  +G + L +   D+   ++  D+++     +T       ++   +S  +      +
Sbjct: 273 VAWKPDGTQLL-TASGDKTCKLW--DVETRTL--ITEFNMGPAVDDQQVSCLW--QGKYL 325

Query: 317 VFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +  S       +  +  +   +  RI +           SP    I      G
Sbjct: 326 LSVSLSG---FINYLDVDNPQKPIRIIKGHNKPITVLTLSPDRGTIYTGSHDG 375


>gi|290992023|ref|XP_002678634.1| hypothetical protein NAEGRDRAFT_32701 [Naegleria gruberi]
 gi|284092247|gb|EFC45890.1| hypothetical protein NAEGRDRAFT_32701 [Naegleria gruberi]
          Length = 1186

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 103/293 (35%), Gaps = 46/293 (15%)

Query: 159 SDDIYQSITGE-KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           +D   + +T     +FN  +   S       + +++  +  +  N +  +     ++   
Sbjct: 47  ADINQRGVTAPTSLEFNQTLAGHSGKESKDQLPSNVMRVSWNEENEKLTSSDASGLI--- 103

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
                   + +     +      +++ R     K +          ++SS+G++  I   
Sbjct: 104 --------IVWNYNKQKKEWEEEMLNNREKSVVKDL----------KWSSDGQKICIVYD 145

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS- 336
            D A+ +  VD   N  + L  T  +N+   +SPD+  ++F     G  ++++  +N   
Sbjct: 146 -DGAVIVGGVDGNRNWGKSL-KTQLVNVE--WSPDARYLLFG---TGNGEVWLFDANSGI 198

Query: 337 DQKRISQDKEASYFDPVWSPQGD---------LIAFTKFSGEKFAIGVMKKDGSQERLLV 387
               ++           W   G           +A    +G      +M+ D   + +L+
Sbjct: 199 KLVNMNPQSNNILAGVDWY-DGREGYPDLNAPTLAICYRNG---RCQLMRGDLDDDPVLI 254

Query: 388 EDS-NLQAPTWSPSGRSLIFSRKK--DGDTGSKLYSIDLNGRNETLINTPAYA 437
           +    +  P W+PSG  L  + ++  DG     +      G++   +  P   
Sbjct: 255 DAGMLINEPKWNPSGTVLALAGQQDLDGKPMGIIQFYSPYGKHLKTLKVPGNG 307


>gi|170114082|ref|XP_001888239.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164636906|gb|EDR01197.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 960

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 48/115 (41%), Gaps = 7/115 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   NS+ V D        +     +++    FS +  ++   ++D      V + D  
Sbjct: 822 SGSADNSVQVWDASTGAELKVLNGHMKLVSSVAFSTDGTQIVSGSFDK----SVRVWDAS 877

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                K + +    I +  FS++G R + S  +D+++ ++  D  + A  ++ N 
Sbjct: 878 TGAELKVLNSHMEAISSVAFSTDGTRIV-SGSRDKSVRVW--DASTGAELKVLNG 929



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 63/199 (31%), Gaps = 12/199 (6%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
              AN   L+     I     +S   Q      +  +          +       +    
Sbjct: 748 YFTANPPALSTPHLYISALASWS--TQSTMSEQWKQKFCGIPSFSHRKASDLALIVIQMN 805

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQI 316
             + +  FS++G   +IS   D ++ ++  D  +    + L   + +  S ++S D +QI
Sbjct: 806 ESVDSVAFSTDGT-CIISGSADNSVQVW--DASTGAELKVLNGHMKLVSSVAFSTDGTQI 862

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           V  S     + + V  ++   + ++      +     +S  G  I           + V 
Sbjct: 863 VSGSF---DKSVRVWDASTGAELKVLNSHMEAISSVAFSTDGTRIVSGSRDKS---VRVW 916

Query: 377 KKDGSQERLLVEDSNLQAP 395
                 E  ++      +P
Sbjct: 917 DASTGAELKVLNGHTHLSP 935


>gi|115443380|ref|XP_001218497.1| dipeptidyl-peptidase 5 precursor [Aspergillus terreus NIH2624]
 gi|121733519|sp|Q0C8V9|DPP5_ASPTN RecName: Full=Probable dipeptidyl-peptidase 5; AltName:
           Full=Dipeptidyl-peptidase V; Short=DPP V; Short=DppV;
           Flags: Precursor
 gi|114188366|gb|EAU30066.1| dipeptidyl-peptidase 5 precursor [Aspergillus terreus NIH2624]
          Length = 723

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 35/125 (28%), Gaps = 24/125 (19%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFA-------IGVMKKDGSQERLLVED------ 389
                   D   SP G  +AF   + +          I +   DGS     +        
Sbjct: 224 YPPFGDSTDYDVSPDGKWVAFKSKAPDVPRANYTTAYIYLAPHDGSSTATPINGPDSPGT 283

Query: 390 -----SNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDP- 440
                 +   P +SP  R L + +       S    LY   L  +  T      +   P 
Sbjct: 284 PEGVQGDANYPVFSPDSRHLAYFQMAHKSYESDRRVLYVYTLGSKTTTPAVAGDWNRSPD 343

Query: 441 --QWV 443
             +W+
Sbjct: 344 SAKWL 348



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 46/153 (30%), Gaps = 26/153 (16%)

Query: 310 SPDSSQIVFESDREGKEQ-------LYVMQSNGS---------DQKRISQDKEASYFDPV 353
           SPD   + F+S      +       +Y+   +GS         D     +  +     PV
Sbjct: 236 SPDGKWVAFKSKAPDVPRANYTTAYIYLAPHDGSSTATPINGPDSPGTPEGVQGDANYPV 295

Query: 354 WSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLI 405
           +SP    +A+ + + + +      + V           V     ++P    W    + LI
Sbjct: 296 FSPDSRHLAYFQMAHKSYESDRRVLYVYTLGSKTTTPAVAGDWNRSPDSAKWL-DNKHLI 354

Query: 406 FSRKKDGDTGS-KLYSIDLNGRNETLINTPAYA 437
              +            ID +   +    T   A
Sbjct: 355 LGSEDHARVRLFGPVPIDADDDFKPQNFTDGGA 387


>gi|91084031|ref|XP_966556.1| PREDICTED: similar to WD40 protein [Tribolium castaneum]
 gi|270008003|gb|EFA04451.1| hypothetical protein TcasGA2_TC014755 [Tribolium castaneum]
          Length = 316

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 71/184 (38%), Gaps = 16/184 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +SG +  +L + D    N + L      +   P  + + + + +A   + + +++
Sbjct: 120 VEDTFLSGSLDKTLRLWDLRSPNCQGLMH----LSGRPVAAYDPEGLIFAAGVNSESIKL 175

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
           Y +   D       K            +FS +GK  LIS        I  +D       +
Sbjct: 176 YDLRSFDKGPFVTFKLTQEKECDWTGLKFSRDGKTILISTN---GSIIRLIDAFHGTPLQ 232

Query: 296 RLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             T   N   I I AS+SPD SQ +F    +G+  ++   + G     ++ D        
Sbjct: 233 TFTGHLNNKGIPIEASFSPD-SQFIFSGSTDGRVHVWNADT-GYKVCVLNADHPGPVQCV 290

Query: 353 VWSP 356
            ++P
Sbjct: 291 QFNP 294


>gi|115483460|ref|NP_001065400.1| Os10g0563300 [Oryza sativa Japonica Group]
 gi|12597885|gb|AAG60193.1|AC084763_13 putative WD40 protein [Oryza sativa Japonica Group]
 gi|31433536|gb|AAP55034.1| WD-repeat protein 8, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113639932|dbj|BAF27237.1| Os10g0563300 [Oryza sativa Japonica Group]
 gi|125532972|gb|EAY79537.1| hypothetical protein OsI_34666 [Oryza sativa Indica Group]
 gi|125575708|gb|EAZ16992.1| hypothetical protein OsJ_32477 [Oryza sativa Japonica Group]
          Length = 470

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/196 (13%), Positives = 64/196 (32%), Gaps = 9/196 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+ +   Y          V            +I    + I   R+S + +  L + + 
Sbjct: 55  WAPDSE---YILCGLYKRPMVQAWSLSQPDWTCKIDEGPAGIAYARWSPDSRHILTTSEF 111

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++S+   +    +        +S  ++ D       + R+ K+ + ++  +  + 
Sbjct: 112 QLRLTVWSLVNTACIHVQWPKHASRGVS--FTKDGKFAAICTRRDCKDYVNLLSCHSWEI 169

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSN-LQAP 395
             +            WSP    I     S  ++ + +   DG    + L  E    ++  
Sbjct: 170 MSVFAVDTVDLAGVEWSPDDSAIV-VWDSLLEYKVLIYSPDGRCLFKYLAYESGLGVKTV 228

Query: 396 TWSPSGRSLIFSRKKD 411
            WSP G+ L       
Sbjct: 229 AWSPCGQFLAVGSYDQ 244



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 59/155 (38%), Gaps = 13/155 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+SP+ + +   +   E  LR+ +           +   +       F+ +GK A I  +
Sbjct: 97  RWSPDSRHILTTS---EFQLRLTVWSLVNTACIH-VQWPKHASRGVSFTKDGKFAAICTR 152

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDREGKEQLYVMQS 333
           +D       V+L S  +  + +   ++        +SPD S IV   D   + ++ +   
Sbjct: 153 RDCKDY---VNLLSCHSWEIMSVFAVDTVDLAGVEWSPDDSAIV-VWDSLLEYKVLIYSP 208

Query: 334 NGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +G    K ++ +         WSP G  +A   + 
Sbjct: 209 DGRCLFKYLAYESGLGVKTVAWSPCGQFLAVGSYD 243


>gi|217974812|ref|YP_002359563.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Shewanella baltica OS223]
 gi|217499947|gb|ACK48140.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           baltica OS223]
          Length = 766

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 62/211 (29%), Gaps = 60/211 (28%)

Query: 250 PKRIGNFRSMILAPRF----------SSNGKRALISVQKDEA---MDIYSVDLQSNATER 296
            K+      M  +P            S +G R      + +     D++ +D++S  +  
Sbjct: 42  GKKPLTIERMNASPALAGTSPRGLKLSPDGLRVTYLAGRKDNQSFYDLWQMDVKSGESSL 101

Query: 297 L-------TNTLFINISAS--------------YSPDSSQIVFESDREGKEQLYVMQSNG 335
           L       TN L     A               +  D SQ +          LY      
Sbjct: 102 LLNADKLATNELSDEEKARRERQRIYGEGIMEYFWADDSQALLI---PASGNLYYFSLVD 158

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS----- 390
           +   ++    E    D   SP+G  ++F +       + V+     + +++  D      
Sbjct: 159 NSVTQL-PIGEGFATDARLSPKGHFVSFVRDQ----NLYVLDLATKKLQVMTTDGGGVIK 213

Query: 391 -------------NLQAPTWSPSGRSLIFSR 408
                         +    W+P   ++ F+R
Sbjct: 214 NAMAEFVAQEEMDRMTGYWWAPDESAIAFTR 244



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 47/331 (14%), Positives = 108/331 (32%), Gaps = 72/331 (21%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS---DDIYQSITGEKGDFNSRILFVSESV 184
           F L D    +  IG+ F ++ A      H +S   D     +     D  ++ L V  + 
Sbjct: 154 FSLVDNSVTQLPIGEGF-ATDARLSPKGHFVSFVRDQNLYVL-----DLATKKLQVMTTD 207

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-----V 239
             G+IKN++           ++       +    ++P++  +A+   D+  + +     +
Sbjct: 208 GGGVIKNAM---------AEFVAQEEMDRMTGYWWAPDESAIAFTRIDESAVEQVTRNEI 258

Query: 240 YLMDTRIDRAPKRIGNFRSMILA------------------------------PR--FSS 267
           Y    ++           ++ +A                              PR  +  
Sbjct: 259 YADGIKLTEQRYPAAGKNNVDIALGVVTLKDKAINWVSLREENSKEKSKDIYLPRVDWLP 318

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----------FINISASYSPDSSQI 316
           + K      Q   + D + +DLQ  A + LT               +N    +    S  
Sbjct: 319 DSKHLSFQWQ---SRDQHQLDLQLVALDALTKPKTLVKERSDAWVNLNNDLHFLKQQSAF 375

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IG 374
           ++ S+R+G   LY+    G  + ++++ + A             + FT          + 
Sbjct: 376 IWASERDGFNHLYLFDLKGKLKTQLTKGEWAVDELEYIDETAGWVYFTGSKDTPIEKQLY 435

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +   G +   + + + +  P ++   +S+ 
Sbjct: 436 RVPLAGGKVERVSKQAGMHNPVFA-DNQSVY 465



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 69/224 (30%), Gaps = 46/224 (20%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--- 302
           +D +  ++          R S  G        ++    +Y +DL +   + +T       
Sbjct: 157 VDNSVTQLPIGEGFATDARLSPKGHFVSFVRDQN----LYVLDLATKKLQVMTTDGGGVI 212

Query: 303 --------------INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                               ++PD S I F             + + S  +++++++  +
Sbjct: 213 KNAMAEFVAQEEMDRMTGYWWAPDESAIAFT------------RIDESAVEQVTRNEIYA 260

Query: 349 YF----DPVWSPQGDL---IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                 +  +   G     IA    + +  AI  +       +   +D  L    W P  
Sbjct: 261 DGIKLTEQRYPAAGKNNVDIALGVVTLKDKAINWVSLREENSKEKSKDIYLPRVDWLPDS 320

Query: 402 RSLIF--SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           + L F    +       +L ++D   + +TL+          WV
Sbjct: 321 KHLSFQWQSRDQHQLDLQLVALDALTKPKTLVK----ERSDAWV 360


>gi|114593207|ref|XP_001158344.1| PREDICTED: WD repeat-containing protein 1 isoform 5 [Pan
           troglodytes]
          Length = 540

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 61/212 (28%), Gaps = 59/212 (27%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++ + +++A      E    V+L D+        +G                       
Sbjct: 43  AWTEDSKRIAVVGEGREKFGAVFLWDSGSS-----VGEITGHN----------------- 80

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 I SVD++ +   RL      N +A +             EG    +        
Sbjct: 81  ----KVINSVDIKQSRPYRLATGSDDNCAAFF-------------EGPPFKFKFTIG--- 120

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNL 392
                 D         +SP G+  A     G    I +      ++          D  +
Sbjct: 121 ------DHSRFVNCVRFSPDGNRFATASADG---QIYIYDGKTGEKVCALGGSKAHDGGI 171

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            A +WSP    L+      GD  SK++ + +N
Sbjct: 172 YAISWSPDSTHLL---SASGDKTSKIWDVSVN 200



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 8/91 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMI 260
           ++      + +   RFSP+  + A A+ D     ++Y+ D +       +G  +     I
Sbjct: 116 KFTIGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGI 171

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            A  +S +    L S   D+   I+ V + S
Sbjct: 172 YAISWSPDSTHLL-SASGDKTSKIWDVSVNS 201


>gi|323456414|gb|EGB12281.1| hypothetical protein AURANDRAFT_61310 [Aureococcus anophagefferens]
          Length = 1119

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 73/215 (33%), Gaps = 15/215 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           AN   L P R       + + N ++ +       D   ++L     ++ P  +  F +  
Sbjct: 438 ANAHVLGPDRWVAGLWAQQARNARRTSEVRAAAPDAGGLFLWRNGDEKPPPCVATFANPA 497

Query: 261 ---LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQI 316
               A   S +G R            ++ +D        L      ++S  ++SP     
Sbjct: 498 CDFWAASASRSGTRVAC---GGSDRKVHVLDGD-GNERALLAGHGDDVSLVAFSPSREHH 553

Query: 317 VFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +    R  +G    ++   + +++       E    D  W+P G+  A    +       
Sbjct: 554 LLSVARRGDGGSDAFLFDVDTAEKLAAYDVPEGFVCDARWAPDGERFALALGAASV---- 609

Query: 375 VMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           V   DG S  RL   D    A  +S  G SL+ +R
Sbjct: 610 VFAGDGSSNARLATVDGGAAAVCFSADGASLLAAR 644


>gi|288919679|ref|ZP_06414007.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EUN1f]
 gi|288348968|gb|EFC83217.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EUN1f]
          Length = 767

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 77/214 (35%), Gaps = 12/214 (5%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E R+W+V D        FF +      +  +++D     IT  +        FV      
Sbjct: 554 EVRIWNVADPASPRRLGFFDAVQGTAGMVPSVADSRQGKITWARPTLAPYATFVVGYDGE 613

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            I    L  +D   + I          +    FS +   +A    D +  L      T  
Sbjct: 614 AIQLWDLADLDA-PSRIPRPLRGHSGEVHGFAFSRDGLVLASGGKDLDIRLWDLTNATDP 672

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-----TNTL 301
               K +   RS + A  FSS+  R + S   D  + ++  D+++ A  RL     T+  
Sbjct: 673 KALGKPLTGHRSRVWALAFSSDRNRLV-SGSWDRTIRLW--DVENPAAPRLVARSATDHK 729

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              ++ +++P   + VF   + G  ++ V    G
Sbjct: 730 DHLLAVAFAP-GDRTVFSGCKGG--EIRVWDVAG 760


>gi|216263591|ref|ZP_03435586.1| putative translation initiation factor IF-2 [Borrelia afzelii
           ACA-1]
 gi|215980435|gb|EEC21256.1| putative translation initiation factor IF-2 [Borrelia afzelii
           ACA-1]
          Length = 881

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 48/151 (31%), Gaps = 22/151 (14%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G+    S  +D     YS +         T     N       D     +  +R+G+
Sbjct: 57  SRDGRTGGYSQNRDGRTGGYSQNRDGR-----TGGYSQNR------DGRTGGYSQNRDGR 105

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
              Y    +G      SQ+++        +  G    +++    +       +DG     
Sbjct: 106 TDGYSQNRDGR-TGGYSQNRDGRTGGYSQNRDGRTGGYSQNRDGRTGGYSQNRDGR---- 160

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
                +         GR+  +S+ +DG TG 
Sbjct: 161 -TGGYSQNR-----DGRTGGYSQNRDGRTGG 185


>gi|70778824|ref|NP_001020547.1| WD repeat-containing protein 61 isoform b [Mus musculus]
 gi|12845609|dbj|BAB26819.1| unnamed protein product [Mus musculus]
          Length = 207

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 15  AFSPDSQYLATGTHMGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 69

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 70  IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 125

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 126 LAGTLSGHASWVLNVAFCPD 145



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 57/176 (32%), Gaps = 18/176 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y   +R + +    +SP+ + +A    D      + + D    +    +      I +  
Sbjct: 44  YSLDTRGKFILSIAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLT 99

Query: 265 FSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           FS +  + L++   D  + IY V   +L       L+      ++ ++ PD +       
Sbjct: 100 FSPD-SQLLVTASDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTHF---VS 151

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
               + + V             D +   +   ++  G  I      G+   I V  
Sbjct: 152 SSSDKSVKVWDVGTRTCIHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHVYD 204


>gi|217073252|gb|ACJ84985.1| unknown [Medicago truncatula]
          Length = 389

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/265 (13%), Positives = 80/265 (30%), Gaps = 42/265 (15%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +    FSP+ +++A  + D      V   D             ++ +L   +
Sbjct: 114 TISGHGEAVLSVAFSPDGRQLASGSGDT----TVRFWDLGTQTPMYTCTGHKNWVLCIAW 169

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP---DSSQIVFES 320
           S +GK  + S      +  +  D Q+       LT         S+ P   ++    F S
Sbjct: 170 SPDGKYLV-SGSMSRELICW--DPQTGKQLGNALTGHKKWITGISWEPVHLNAPCRRFVS 226

Query: 321 -DREGKEQLYVMQSN--------GSDQKRISQDKEASYFDP-------VW-SPQGDLIAF 363
             ++G  +++ +                 +    +   +         VW + +G LI  
Sbjct: 227 ASKDGDARIWDVSLKKCIVLCGHTLAVTCVKWGGDGVIYTGSQDCTIKVWETTEGKLI-- 284

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-KKDGDTGSKLYSID 422
                +     V     S E +L   +          G+   +S   +      + Y+  
Sbjct: 285 --RELKGHGHWVNSLALSTEYVLRTGAFDHT------GKQ--YSSPDEMKKVALERYNTT 334

Query: 423 LNGRNETLINTPAYASDPQWVGFMD 447
                E L++     +   W  F++
Sbjct: 335 RGTAPERLVSGSDDFTMFLWEPFIN 359



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 72/258 (27%), Gaps = 39/258 (15%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       Y        +    +SP+ + +   +   E    +      
Sbjct: 136 SGSGDTTVRFWDLGTQTPMYTCTGHKNWVLCIAWSPDGKYLVSGSMSRE---LICWDPQT 192

Query: 246 IDRAPKRIGNFRSMILAPRFSSNG----KRALISVQKDEAMDIYSVDLQS-----NATER 296
             +    +   +  I    +         R  +S  KD    I+ V L+        T  
Sbjct: 193 GKQLGNALTGHKKWITGISWEPVHLNAPCRRFVSASKDGDARIWDVSLKKCIVLCGHTLA 252

Query: 297 LTNTLFINISASY--SPDSSQIVFESDRE-------GKEQLYVMQSNGSDQKRISQDKEA 347
           +T   +      Y  S D +  V+E+          G    +V     S +  +      
Sbjct: 253 VTCVKWGGDGVIYTGSQDCTIKVWETTEGKLIRELKGHGH-WVNSLALSTEYVLRTGAFD 311

Query: 348 SYFDPVWSPQG-DLIAFTKFS-------------GEKFAIGVMKK---DGSQERLLVEDS 390
                  SP     +A  +++              + F + + +       + R+     
Sbjct: 312 HTGKQYSSPDEMKKVALERYNTTRGTAPERLVSGSDDFTMFLWEPFINKHPKTRMTGHQQ 371

Query: 391 NLQAPTWSPSGRSLIFSR 408
            +    +SP G+ +  + 
Sbjct: 372 LVNHVYFSPDGQWIASAS 389



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 37/112 (33%), Gaps = 6/112 (5%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
           ++R    I      +L+  FS +G++   S   D  +  +  DL +       T      
Sbjct: 108 VNRCSATISGHGEAVLSVAFSPDGRQLA-SGSGDTTVRFW--DLGTQTPMYTCTGHKNWV 164

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +  ++SPD   +V  S    +E +      G          +       W P
Sbjct: 165 LCIAWSPDGKYLV--SGSMSRELICWDPQTGKQLGNALTGHKKWITGISWEP 214


>gi|150026369|ref|YP_001297195.1| Xaa-Pro dipeptidyl-peptidase [Flavobacterium psychrophilum
           JIP02/86]
 gi|149772910|emb|CAL44394.1| Xaa-Pro dipeptidyl-peptidase [Flavobacterium psychrophilum
           JIP02/86]
          Length = 721

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/307 (13%), Positives = 98/307 (31%), Gaps = 69/307 (22%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-- 261
           + LT   D  + EP FSP+  K+A+A         +Y+ +    +  +   + +   +  
Sbjct: 127 KSLTKIADDKIQEPTFSPDGSKIAFA-----KENNLYVYELASKKTTQITTDGKKNAIIN 181

Query: 262 ---------------APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                          A  +++   +       +  +  +S+++       +T+      +
Sbjct: 182 GVTDWVYEEEFAFVRAFDWNATSDKIAFIRFDESQVPEFSMNIYGKDLYPVTDVFKYPKA 241

Query: 307 ASYSPDSSQIVFE--------SDREGKEQLYV---------------------------- 330
              + D S  +++         D       Y+                            
Sbjct: 242 GEKNSDVSLHIYDIKTANVKKVDLGNYNDFYIARLNWTNEANTLSAQVLNRHQSTLDLLF 301

Query: 331 MQSNGSDQKRISQDKEASYFDP----VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +  N   ++ +  +K+ +Y D      +      I +T        I +  K G  +  +
Sbjct: 302 IDGNTGAKRIVLNEKDKAYIDVTDNLTFLKDNSFI-WTSEKDGFNHIYLYDKTGKLKNQI 360

Query: 387 VEDSNLQAPTWSPSGR--SLIFSRKKDGDTGSKLYSIDLNGRNETLIN----TPAYASDP 440
            + +      +    +  ++ +   ++G     +YSI LNG  +T +     T A    P
Sbjct: 361 TKGNWDITNYYGFDEKTGTIYYQSVENGSINRDVYSIKLNGSGKTRLTSATGTNAATFSP 420

Query: 441 QWVGFMD 447
            +  F++
Sbjct: 421 NFQYFIN 427



 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 13/91 (14%)

Query: 351 DPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
              +S     I     + + F         +          + +D  +Q PT+SP G  +
Sbjct: 91  SYTFSSDEKKILIANNTNQIFRHSFLANFYIYDMVNKSLTKIADD-KIQEPTFSPDGSKI 149

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            F+++      + LY  +L  +  T I T  
Sbjct: 150 AFAKE------NNLYVYELASKKTTQITTDG 174


>gi|125583501|gb|EAZ24432.1| hypothetical protein OsJ_08185 [Oryza sativa Japonica Group]
          Length = 316

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 59/168 (35%), Gaps = 9/168 (5%)

Query: 195 VMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           V D D    + Y     +  +     SP+ +K+A    DD + L   L+D    +    +
Sbjct: 129 VRDYDMERFQLYKHFQFEWPVNHTALSPD-RKLAVIVGDDPNGL---LIDANSGKTLHSL 184

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                   A  +S +G+    +  +D+   I+     S +   L   L    S  ++ D 
Sbjct: 185 KGHFDYSFASAWSPDGRTFA-TGNQDKTCRIWDARNLSKSLHVLRGNLGAIRSIRFTSDG 243

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               F S  E  + ++V        +R   D         +SP  D++
Sbjct: 244 Q---FMSMAEPADFVHVFDVGSDYTRRQELDFFGEISGMSFSPDTDML 288


>gi|297671159|ref|XP_002813712.1| PREDICTED: WD repeat-containing protein 51A-like isoform 3 [Pongo
           abelii]
          Length = 369

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 77/221 (34%), Gaps = 18/221 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V      +  Y        +    FSP+   +A  + D    +R+++ + + +    R
Sbjct: 5   LMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRD--KTVRIWVPNVKGESTAFR 62

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                + + +  F S+G+   ++   D+ + +++   Q      L+  +     A +SPD
Sbjct: 63  --AHTATVRSVHFCSDGQS-FVTASDDKTIKVWATHRQ-KFLFSLSQHINWVRCAKFSPD 118

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              IV  SD    + + +   +  +      +         + P G  IA          
Sbjct: 119 GRLIVSASD---DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKV 175

Query: 373 IGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
             V        RLL    +  + +   ++ PSG  LI +  
Sbjct: 176 WDV-----RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 211



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 31/225 (13%), Positives = 66/225 (29%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +         +    +    F  + Q    A+ D      + +  T 
Sbjct: 40  SGSRDKTVRIWVPNVKGESTAFRAHTATVRSVHFCSDGQSFVTASDDK----TIKVWATH 95

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             +    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 96  RQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKSSRECVHSYCEHGGFV 152

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + I           + V         +  Q   A+     + P G+ +   
Sbjct: 153 TYVDFHPSGTCIAAAGM---DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITA 209

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 210 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 244


>gi|156550608|ref|XP_001604288.1| PREDICTED: similar to WD40 protein [Nasonia vitripennis]
          Length = 366

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 71/184 (38%), Gaps = 16/184 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +SG +  SL + D    N   +      +   P  + + + + +A   + + +++
Sbjct: 169 VEDTFLSGSLDKSLRLWDLRSPNCHGVMN----VSGRPVAAYDPEGLIFAAGVNSESIKL 224

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
           Y +   D       K            +FS +GK  L+S        I  +D       +
Sbjct: 225 YDLRSFDKGPFTNFKLSHEKECDWTGLKFSRDGKTILVSTN---GSIIRLIDAFHGTPLQ 281

Query: 296 RLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             T   N   I I AS+SPD SQ VF    +G+  ++   + G     ++ D  A     
Sbjct: 282 TFTGHLNNKGIPIEASFSPD-SQFVFSGSTDGRVHVWNADT-GYKVCVLNGDHPAPVQCV 339

Query: 353 VWSP 356
            ++P
Sbjct: 340 QFNP 343


>gi|125540936|gb|EAY87331.1| hypothetical protein OsI_08735 [Oryza sativa Indica Group]
          Length = 316

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 59/168 (35%), Gaps = 9/168 (5%)

Query: 195 VMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           V D D    + Y     +  +     SP+ +K+A    DD + L   L+D    +    +
Sbjct: 129 VRDYDMERFQLYKHFQFEWPVNHTALSPD-RKLAVIVGDDPNGL---LIDANSGKTLHSL 184

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                   A  +S +G+    +  +D+   I+     S +   L   L    S  ++ D 
Sbjct: 185 KGHFDYSFASAWSPDGRTFA-TGNQDKTCRIWDARNLSKSLHVLRGNLGAIRSIRFTSDG 243

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               F S  E  + ++V        +R   D         +SP  D++
Sbjct: 244 Q---FMSMAEPADFVHVFDVGSDYTRRQELDFFGEISGMSFSPDTDML 288


>gi|157125093|ref|XP_001660617.1| guanine nucleotide-binding protein beta 5 (g protein beta5) [Aedes
           aegypti]
 gi|108873776|gb|EAT38001.1| guanine nucleotide-binding protein beta 5 (g protein beta5) [Aedes
           aegypti]
          Length = 352

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 76/227 (33%), Gaps = 17/227 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +       +    +SP+++ +  ++ D +    + + D   +     +    + ++ 
Sbjct: 56  PRRVLKGHQAKVLCSDWSPDKRHIVSSSQDGK----LIIWDAFTNYKEHAVTMPTTWVMG 111

Query: 263 PRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQIVF 318
             ++ +G         D  + +Y +    D+ S      T+T +  +S    P+S Q + 
Sbjct: 112 CSYAPSGNLVA-CGGLDNKVTVYPITMEEDISSRKKTVGTHTSY--MSCCIFPNSDQQIL 168

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMK 377
                G     +         +              +P      F   S +K A I  M+
Sbjct: 169 TG--SGDSTCALWDVESGQLLQSFHGHTGDVMSIDLAPNETGNTFVSGSCDKMAFIWDMR 226

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                +      S++ +  + PSG ++        D+  +L+ +  +
Sbjct: 227 SGHVVQSFEGHQSDVNSVKFHPSGDAI---STGSDDSTCRLFDMRAD 270


>gi|84502433|ref|ZP_01000569.1| putative transcriptional regulator; putative regucalcin family
           protein [Oceanicola batsensis HTCC2597]
 gi|84389245|gb|EAQ02042.1| putative transcriptional regulator; putative regucalcin family
           protein [Oceanicola batsensis HTCC2597]
          Length = 292

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 73/215 (33%), Gaps = 34/215 (15%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            + PSRD +   P ++P  Q V +       ILR Y   +R  R+ +      ++ LA  
Sbjct: 7   RIGPSRDWLGESPVWNPESQSVFWIDSRSG-ILRRYTPASRRFRSWQLPAEIGAIGLA-- 63

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
               G+  + +  ++     Y VDL+S   E +      +  A ++ D        DR+G
Sbjct: 64  ----GRDRVFAAIRN---AFYFVDLESGEIELIAAAFEDDDQARFN-DGKM-----DRQG 110

Query: 325 K------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +                +MQ +G    R  +          +SP G  + F         
Sbjct: 111 RFLCGTMALKTDTPDGVLMQIDGDRSIRTLETGIGIANSTCFSPDGKTLYFADSFDRAVR 170

Query: 373 IGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSL 404
                         R+L + S   + T    G ++
Sbjct: 171 AYDYDTASGAISNRRVLADLSAHGSAT---DGATV 202



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 11/126 (8%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +        D     LM    DR+ + +     +  +  FS +GK    +   D A+
Sbjct: 110 GRFLCGTMALKTDTPDGVLMQIDGDRSIRTLETGIGIANSTCFSPDGKTLYFADSFDRAV 169

Query: 283 DIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             Y  D  S A    R+   L  + SA+   D + +    D EG   ++V         R
Sbjct: 170 RAYDYDTASGAISNRRVLADLSAHGSAT---DGATV----DAEGG--IWVCLVQIGKLAR 220

Query: 341 ISQDKE 346
           ++ + +
Sbjct: 221 LTPEGD 226


>gi|297848636|ref|XP_002892199.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338041|gb|EFH68458.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 789

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 66/188 (35%), Gaps = 20/188 (10%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQ 315
               +A  FSS+G+             +  +D ++    + LT          + P  S+
Sbjct: 104 PRSTIAAAFSSDGRTLA---STHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSE 160

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           IV     + + +L+   +  ++  R + D         +   G+L+A     G K  I  
Sbjct: 161 IVASGSLDHEVRLW--NAKTAECIR-THDFYRPIASIAFHADGELLAVAS--GHKLHIWH 215

Query: 376 MKK---DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             K   D S   +L    +L+A  + P G  L+ + +           ID +    T   
Sbjct: 216 YNKIGEDSSPAIVLKTRRSLRAVHFHPHGVPLLLTAEVT--------DIDSSDSAMTRAT 267

Query: 433 TPAYASDP 440
           +P Y   P
Sbjct: 268 SPGYLRYP 275



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 62/201 (30%), Gaps = 22/201 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + + +A    D      V ++D    +  K +   R      RF       + S  
Sbjct: 111 AFSSDGRTLASTHGDH----TVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGS 166

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + ++  + ++    R T+  +    S ++  D   +   S    K  ++     G 
Sbjct: 167 LDHEVRLW--NAKTAECIR-THDFYRPIASIAFHADGELLAVAS--GHKLHIWHYNKIGE 221

Query: 337 D-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           D    I      S     + P G  +  T        +  +    S          L+ P
Sbjct: 222 DSSPAIVLKTRRSLRAVHFHPHGVPLLLTA------EVTDIDSSDSAMTRATSPGYLRYP 275

Query: 396 TWSPSGRSLIFSRKKDGDTGS 416
              P   ++ F+  + G   S
Sbjct: 276 ---P--PAIFFTNTQSGSRTS 291


>gi|262279521|ref|ZP_06057306.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259872|gb|EEY78605.1| conserved hypothetical protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 411

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/281 (12%), Positives = 78/281 (27%), Gaps = 45/281 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF------ 256
              S          S + + +    Y+ +D        L         + + N       
Sbjct: 137 TVDSHGGHPTHASISLDGKFLFVSNYSAFDKGRGGVAVLPILPNGHLGEMVQNIVFADGS 196

Query: 257 --------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--- 305
                        +  FS +GK             +Y+     N  + L      ++   
Sbjct: 197 GHVKGRQESGHAHSTTFSPDGKYLY--ASDLGNDKVYTFRYNPNKPQPLEADSSRDVTFK 254

Query: 306 ---SAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------QDKEASYF 350
                    +SP+       ++   + ++          K+++           +  S  
Sbjct: 255 HGSGPRHMVFSPNGKHAYITAEM--RSEIVTFNVQDGHLKKVAELKLIHEDKTPEFKSAS 312

Query: 351 DPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIF 406
             + SP G   IA  + +  K  +  ++++G   + +V  +N   P   ++  SG+ L  
Sbjct: 313 GIILSPNGKYVIAANRGADNKLLVFKIQQNGLLGKPVVYKANGIEPRAFSFDASGKYLYV 372

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           +          L+  D            A    P  + F +
Sbjct: 373 TNV--FSNNISLFRFDAKNGTLKPAGDAAKIPTPTDIKFFN 411


>gi|238028211|ref|YP_002912442.1| 3-carboxymuconate cyclase-like protein [Burkholderia glumae BGR1]
 gi|237877405|gb|ACR29738.1| 3-carboxymuconate cyclase-like protein [Burkholderia glumae BGR1]
          Length = 401

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/335 (13%), Positives = 92/335 (27%), Gaps = 38/335 (11%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWDVKDRKQ--IIGKKFFSSPASWRKIAHTISDDIYQSITG 168
           L+ G     G D + V +R +D +  +   +   K  +               + +    
Sbjct: 40  LLVGTYTDAGSDGIYV-YR-FDTRTGEVSPVSSAKTVNPSYLLPSRDGRFVYAVNELPGD 97

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-----ILFEPRFSPNQ 223
                    +              L  +  +G +  YL+ S D        +     P  
Sbjct: 98  NGPASQRGGVSAFGFDAKTGALTFLDRVSSEGNDPCYLSLSPDGKYLVTANYSVAADPGG 157

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
               +    D  + +  L      R P +     + + +  FS +G    +     + + 
Sbjct: 158 SFTVFPVEADGKVGQSVLNVHHEGRGPVKGRQDGAHVHSTVFSPDGHYLFVQDLGADKIF 217

Query: 284 IYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS------ 336
            Y             T + +  +     P    +VF   R G+      + NGS      
Sbjct: 218 EYRYTPDGSRGLISPTESRYTLVRPGSGP--RHLVFA--RSGRFAYVTNELNGSVDVYGY 273

Query: 337 DQKRISQDKEASYFDPVW-----------SPQGDLIAFTKFSGEKFAI--GVMKKDGSQE 383
              R++  +      P +           SP G  + +    G+   I    +  +  + 
Sbjct: 274 HDGRLTHLQNLPMAAPGFHGREGGGALHLSPDGRFL-YVTNRGDANEIVAYAVNAENGRL 332

Query: 384 ----RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
               R        +     P+G+ LI   +  G  
Sbjct: 333 SFASRQSTLGKTPREFVIDPTGKWLIVGNQDSGSF 367


>gi|212543275|ref|XP_002151792.1| meiotic recombination protein Ski8/Rec14, putative [Penicillium
           marneffei ATCC 18224]
 gi|210066699|gb|EEA20792.1| meiotic recombination protein Ski8/Rec14, putative [Penicillium
           marneffei ATCC 18224]
          Length = 309

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 9/113 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + +A           +Y+      R P  +      + A  FS  GK         
Sbjct: 156 SNDGKYIA----SGHQNGSIYMFSNETGRMPFSLSGLIKPVRAVAFSPGGKLLA---AAG 208

Query: 280 EAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           ++  I   D +S     +LT      +S  +S     ++  S  +GK +++ +
Sbjct: 209 DSKVIVLYDTESGEQVTQLTGHSAWILSLDWSHTGEYLLSASF-DGKVKVWSV 260



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 40/138 (28%), Gaps = 15/138 (10%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S D   +           + V   +  +Q R  + K A       S  G  IA    +G 
Sbjct: 114 SEDGRYLA---GTTNNGHIKVWDLSNGEQFRDYETKGAFGACIDMSNDGKYIASGHQNGS 170

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              I +   +    R+    S L  P     +SP G+ L             LY  +   
Sbjct: 171 ---IYMFSNETG--RMPFSLSGLIKPVRAVAFSPGGKLLA---AAGDSKVIVLYDTESGE 222

Query: 426 RNETLINTPAYASDPQWV 443
           +   L    A+     W 
Sbjct: 223 QVTQLTGHSAWILSLDWS 240


>gi|182414767|ref|YP_001819833.1| hypothetical protein Oter_2952 [Opitutus terrae PB90-1]
 gi|177841981|gb|ACB76233.1| conserved hypothetical protein [Opitutus terrae PB90-1]
          Length = 683

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 61/167 (36%), Gaps = 30/167 (17%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T         + +P ++ +    DR    +L ++ ++G+   R+     AS  DP  S 
Sbjct: 48  VTQVPANAARPASNPHANDLA-PGDRFDGARLVMVSTDGN--VRVLSAGFASACDPNLSF 104

Query: 357 QGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNL-------------QAPT-WSPS 400
            G  + F      GE F I  +  DG+  R +  +                ++P  W   
Sbjct: 105 DGQRVIFAGQQARGEPFRIWEIGLDGTNLRPVSPEGLDARQPIHVSVLNTLESPQPW--- 161

Query: 401 GRSLIFS------RKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDP 440
             +++F        +    + S LY + L+G     L   P Y  DP
Sbjct: 162 -PTVLFVARESTVSETGRPSVSNLYDVKLDGTELRRLTYNPNYNLDP 207



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 2/101 (1%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           I     A+   P  +P  + +A          + ++  DG+   L    ++   P  S  
Sbjct: 47  IVTQVPANAARPASNPHANDLAPGDRFDGA-RLVMVSTDGNVRVLSAGFASACDPNLSFD 105

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA-YASDP 440
           G+ +IF+ ++      +++ I L+G N   ++     A  P
Sbjct: 106 GQRVIFAGQQARGEPFRIWEIGLDGTNLRPVSPEGLDARQP 146



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/206 (16%), Positives = 68/206 (33%), Gaps = 38/206 (18%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVYLMDTRID--- 247
            L ++  DG N+R L+        +P  S + Q+V +A         R++ +        
Sbjct: 77  RLVMVSTDG-NVRVLSAGFAS-ACDPNLSFDGQRVIFAGQQARGEPFRIWEIGLDGTNLR 134

Query: 248 ---------RAPKRIGNFRSMILAPRFSSNGKRALISVQ--------KDEAMDIYSVDLQ 290
                    R P  +    ++     +       L   +        +    ++Y V L 
Sbjct: 135 PVSPEGLDARQPIHVSVLNTLESPQPWP----TVLFVARESTVSETGRPSVSNLYDVKLD 190

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDR--------EGKEQLYVMQSNGSDQKRIS 342
                RLT     N+      D  ++++ ++R         G+  LY +   G+D +R  
Sbjct: 191 GTELRRLTYNPNYNLDPVQMWDG-RVIYAAERYANDASAEPGRVGLYAIHIEGADMERYG 249

Query: 343 QD-KEASYFDPVWSPQGDLIAFTKFS 367
            +        P  +  G L+ F +  
Sbjct: 250 GELGRRIQRTPCPTADG-LLVFVESD 274


>gi|149921288|ref|ZP_01909743.1| dipeptidyl anminopeptidase [Plesiocystis pacifica SIR-1]
 gi|149817835|gb|EDM77298.1| dipeptidyl anminopeptidase [Plesiocystis pacifica SIR-1]
          Length = 703

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 3/81 (3%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM---KKDGSQERLLVEDSNLQAPTWSPSG 401
                  P  SP G  I +         + V    K D  +         ++   W+  G
Sbjct: 58  GNPDRAAPRLSPDGKRIMWLAPDEGVLNVWVAPAGKLDAGKVVTKDRLRGIRNAGWTADG 117

Query: 402 RSLIFSRKKDGDTGSKLYSID 422
           R +I+++ + G+    L+ ID
Sbjct: 118 RYIIYAQDQAGNENWHLHRID 138



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 56/155 (36%), Gaps = 12/155 (7%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD---LQSNATERLTNTLFI 303
           D  P+ +        APR S +GKR +     +  ++++      L +           I
Sbjct: 49  DLIPRELLFGNPDRAAPRLSPDGKRIMWLAPDEGVLNVWVAPAGKLDAGKVVTKDRLRGI 108

Query: 304 NISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQ--KRISQDKEASYFDPVWS---P 356
             +A ++ D   I++  D+ G E   L+ +           ++ + E        S   P
Sbjct: 109 -RNAGWTADGRYIIYAQDQAGNENWHLHRIDPEVGASSDTDLTPNPEVRAQMVGGSREQP 167

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           +  L+     +     +  M  +   ER LVE ++
Sbjct: 168 KFILVGINDRNPAHHDVYRMNIETG-ERTLVEQND 201



 Score = 36.5 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 51/125 (40%), Gaps = 7/125 (5%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS---RDQILFEPRFSPNQQKVAYATY 231
           S    +  +   G  K +  ++ +  AN   +       +     PR SP+ +++ +   
Sbjct: 20  SPTASLDATEPGGGGKANAQMLAKGTANPDLIPRELLFGNPDRAAPRLSPDGKRIMWLA- 78

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSSNGKRALISVQK--DEAMDIYSVD 288
            DE +L V++       A K +   R   I    ++++G+  + +  +  +E   ++ +D
Sbjct: 79  PDEGVLNVWVAPAGKLDAGKVVTKDRLRGIRNAGWTADGRYIIYAQDQAGNENWHLHRID 138

Query: 289 LQSNA 293
            +  A
Sbjct: 139 PEVGA 143


>gi|239787764|ref|NP_001155053.1| POC1 centriolar protein homolog A isoform 3 [Homo sapiens]
 gi|114587124|ref|XP_516500.2| PREDICTED: POC1 centriolar protein homolog A isoform 2 [Pan
           troglodytes]
          Length = 369

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 77/221 (34%), Gaps = 18/221 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V      +  Y        +    FSP+   +A  + D    +R+++ + + +    R
Sbjct: 5   LMVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRD--KTVRIWVPNVKGESTVFR 62

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                + + +  F S+G+   ++   D+ + +++   Q      L+  +     A +SPD
Sbjct: 63  --AHTATVRSVHFCSDGQS-FVTASDDKTVKVWATHRQ-KFLFSLSQHINWVRCAKFSPD 118

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              IV  SD    + + +   +  +      +         + P G  IA          
Sbjct: 119 GRLIVSASD---DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKV 175

Query: 373 IGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
             V        RLL    +  + +   ++ PSG  LI +  
Sbjct: 176 WDV-----RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 211



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 67/225 (29%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +      +  +    +    F  + Q    A+ D      V +  T 
Sbjct: 40  SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK----TVKVWATH 95

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             +    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 96  RQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKSSRECVHSYCEHGGFV 152

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + I           + V         +  Q   A+     + P G+ +   
Sbjct: 153 TYVDFHPSGTCIAAAGM---DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITA 209

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 210 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 244


>gi|47085751|ref|NP_998183.1| katanin p80 WD40-containing subunit B1 [Danio rerio]
 gi|60390199|sp|Q7ZUV2|KTNB1_DANRE RecName: Full=Katanin p80 WD40-containing subunit B1; Short=Katanin
           p80 subunit B1; AltName: Full=p80 katanin
 gi|28838730|gb|AAH47819.1| Katanin p80 (WD repeat containing) subunit B 1 [Danio rerio]
          Length = 694

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 79/244 (32%), Gaps = 17/244 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E VV+G +  SL + D + A I          +    F P  + +A  + D      + L
Sbjct: 76  ERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGSVDS----NIKL 131

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D R      R       +    FS +GK    S   D  + ++ + +        T+  
Sbjct: 132 WDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLA-SASDDSTVKLWDL-IAGKMITEFTSHT 189

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                  + P+   +   S DR     + +      +    S+ +       +++P G  
Sbjct: 190 SAVNVVQFHPNEYLLASGSADRT----VKLWDLEKFNMIGSSEGETGVVRSVLFNPDGSC 245

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +     S     +   + D   + + V    +     S + + +  S      T    Y 
Sbjct: 246 LY--SGSENTLRVYGWEPDRCFDVVHVGWGKVSDLAIS-NNQMIAVSYS---HTNVSWYV 299

Query: 421 IDLN 424
           +DLN
Sbjct: 300 VDLN 303


>gi|116198181|ref|XP_001224902.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88178525|gb|EAQ85993.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 894

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 98/237 (41%), Gaps = 25/237 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I  L+ S+++I F    + + + +A+       +L V+   +      K+ G+F SM  A
Sbjct: 290 IHTLSISQNEIDFV-TINKSGEWLAFGASKLGQLL-VWEWQSE-SYILKQQGHFDSMN-A 345

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESD 321
             +S +G+R + ++  D  + ++  D++S       T       +  ++   + ++F + 
Sbjct: 346 LVYSPDGQRIV-TIADDGKIKVW--DIESGFCIVTFTEHTSGITACEFAKKGN-VLFTAS 401

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +G  + + +     + K  +  +  S+      P G+++A        F + +      
Sbjct: 402 LDGSIRAWDL-IRYRNFKTFTAAERLSFSCMAVDPSGEVVAAGSID--SFDVHIWSVQTG 458

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             +LL   S  + P     ++P+G  L+       D  ++++SI     N T  + P
Sbjct: 459 --QLLDRLSGHEGPVSSLAFAPNGGLLV---SGSWDRTARIWSI----FNRTQTSEP 506


>gi|322711956|gb|EFZ03529.1| hypothetical protein MAA_00603 [Metarhizium anisopliae ARSEF 23]
          Length = 601

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 20/197 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-----LAPRFSSNGKRA 272
           RFS + +   Y         +++ + T          N + M       +  FS +G+  
Sbjct: 305 RFSHDGK---YVATGCNRSAQIFDVQTGEKVCVLEDHNAQDMTADLYIRSVCFSPDGRYL 361

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVM 331
             +  +D+ + ++  D+QS       +    +  S  ++ D   I   S   G   + + 
Sbjct: 362 A-TGAEDKLIRVW--DIQSRTIRNHFSGHEQDIYSLDFARDGRTIASGS---GDRTVRLW 415

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                    ++   E        SP    +A      +   +  +      ERL   D +
Sbjct: 416 DIEQGTNT-LTLTIEDGVTTVAISPDTQYVAAGSLD-KSVRVWDIHSGFLVERLEGPDGH 473

Query: 392 ---LQAPTWSPSGRSLI 405
              + +  +SP+G+ L+
Sbjct: 474 KDSVYSVAFSPNGKDLV 490


>gi|322702115|gb|EFY93863.1| hypothetical protein MAC_00354 [Metarhizium acridum CQMa 102]
          Length = 601

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 67/197 (34%), Gaps = 20/197 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-----LAPRFSSNGKRA 272
           RFS + +   Y         +++ + T          N + M       +  FS +G+  
Sbjct: 305 RFSHDGK---YVATGCNRSAQIFDVQTGEKVCVLEDHNAQDMTADLYIRSVCFSPDGRYL 361

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVM 331
             +  +D+ + ++  D+QS       +    +  S  ++ D   I   S   G   + + 
Sbjct: 362 A-TGAEDKLIRVW--DIQSRTIRNHFSGHEQDIYSLDFARDGRTIASGS---GDRTVRLW 415

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                    ++   E        SP    +A      +   +  +      ERL   D +
Sbjct: 416 DIEQGTNT-LTLTIEDGVTTVAISPDTQYVAAGSLD-KSVRVWDIHSGFLVERLEGPDGH 473

Query: 392 ---LQAPTWSPSGRSLI 405
              + +  +SP+G+ L+
Sbjct: 474 KDSVYSVAFSPNGKDLV 490


>gi|39953425|ref|XP_363984.1| hypothetical protein MGG_08829 [Magnaporthe oryzae 70-15]
 gi|145021238|gb|EDK05367.1| hypothetical protein MGG_08829 [Magnaporthe oryzae 70-15]
          Length = 607

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 64/198 (32%), Gaps = 23/198 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRAL 273
           RFS + +   Y         +++ ++T       +           I +  FS +GK   
Sbjct: 306 RFSADGK---YVATGCNRSAQIFDVNTGEKVCVLQDDNADTTGDLYIRSVCFSPDGKYLA 362

Query: 274 ISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +  +D+ + ++  D+ +     +         S  ++ D   I   S   G   + +  
Sbjct: 363 -TGAEDKQIRVW--DITTRTIRIQFAGHEQDIYSLDFARDGRTIASGS---GDRTVRLWD 416

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDS 390
                   +   ++        SP    +A          + V         ERL   D 
Sbjct: 417 IENGTALTVFTIEDG-VTTVAISPDTKYVAAGSLDKS---VRVWDLTQGCPVERLEGPDG 472

Query: 391 N---LQAPTWSPSGRSLI 405
           +   + +  +SP+GR L+
Sbjct: 473 HKDSVYSVAFSPNGRDLV 490



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 75/232 (32%), Gaps = 44/232 (18%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR I  G     V  RLWD+++   +                           T E G  
Sbjct: 400 GRTIASGSGDRTV--RLWDIENGTALT------------------------VFTIEDGVT 433

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ---ILFEPRFSPNQQKVAYAT 230
              I   ++ V +G +  S+ V D             D     ++   FSPN + +   +
Sbjct: 434 TVAISPDTKYVAAGSLDKSVRVWDLTQGCPVERLEGPDGHKDSVYSVAFSPNGRDLVTGS 493

Query: 231 YDD--------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            D              +    ++  R  K     R  +L+   + +  + ++S  KD  +
Sbjct: 494 LDKTIKLWELATPRGNMQNQGSKGGRCVKTFEGHRDFVLSVALTPD-NQWVMSGSKDRGV 552

Query: 283 DIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQS 333
             +  D ++ +T+ +      ++ S + SP      F +   G  +  +   
Sbjct: 553 QFW--DPRTGSTQLMLQGHKNSVISVAPSPTGG---FFATGSGDMRARIWSY 599


>gi|311897107|dbj|BAJ29515.1| hypothetical protein KSE_37140 [Kitasatospora setae KM-6054]
          Length = 333

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 81/234 (34%), Gaps = 34/234 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN-----GKRA 272
            +SP+ +  A+                +   A    G   S      F  +     G   
Sbjct: 106 AWSPDGKHAAFVDGAGNLQTADPDGTHKALVAKAPTGTTWSHPTWQVFGPDEPHGAGTFL 165

Query: 273 LISVQKDEAMDIYSVDL-QSNATERLTNTLFINIS--------ASYSPDSSQIVFESDRE 323
           L +    +A+ + SV+       E L+       S         S +  S   V+ +  +
Sbjct: 166 LFTADDKKALRLMSVEAKAGGKPEPLSVGDSEGASIPQTGNQWPSSNGHSGMTVYANKDD 225

Query: 324 GKEQLY--VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DG 380
           GK   +  V ++NG D   +++  +     P  + +GD + F +       I      +G
Sbjct: 226 GKVYFHDVVSRTNGGD---VTKGSQ-----PSLADEGD-LVFVRSVNGHSHIFTSPAGEG 276

Query: 381 SQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +E  L   +++    P  S  GR++ F R  DG     +Y++   G     ++
Sbjct: 277 KKEADLTPGASVDYTEPAISHDGRTVAF-RGPDG-----VYTVPFAGGKPERVS 324



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 72/214 (33%), Gaps = 29/214 (13%)

Query: 193 LCVMDRDGANIRYLTPSRDQILF-EPRF---SPN-----QQKVAYATYDDEDILRVYLMD 243
           L   D DG +   +  +     +  P +    P+        + +   DD+  LR+  ++
Sbjct: 123 LQTADPDGTHKALVAKAPTGTTWSHPTWQVFGPDEPHGAGTFLLFTA-DDKKALRLMSVE 181

Query: 244 TRIDRAPKRIGNFRSM-----ILAPRF-SSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +    P+ +    S          ++ SSNG   +      +   +Y  D+ S      
Sbjct: 182 AKAGGKPEPLSVGDSEGASIPQTGNQWPSSNGHSGMTVYANKDDGKVYFHDVVSR----- 236

Query: 298 TNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVW 354
           TN   +      S + +   +VF     G   ++   +  G  +  ++      Y +P  
Sbjct: 237 TNGGDVTKGSQPSLADEGD-LVFVRSVNGHSHIFTSPAGEGKKEADLTPGASVDYTEPAI 295

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           S  G  +AF    G    +  +   G +   + +
Sbjct: 296 SHDGRTVAFRGPDG----VYTVPFAGGKPERVSD 325


>gi|284049855|ref|ZP_06380065.1| WD-40 repeat-containing protein [Arthrospira platensis str. Paraca]
          Length = 970

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 63/189 (33%), Gaps = 31/189 (16%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           +G     + +    DG+ I  LT  R  I    +F+ N Q +  A+YD      V   + 
Sbjct: 797 TGDESGQIHIWRVADGSKIATLTGHRLSIKTL-KFNENGQILVSASYDK----IVNFWNL 851

Query: 245 RIDRAPKRIGNFRSMILAPRF--------------SSNGKRALISVQKDEAMDIYSVDLQ 290
                      F+S+++ P F              S N  + L S   D  + ++ ++  
Sbjct: 852 ANHEC------FKSVLIEPDFLCDAPLMPKMKIFLSPN-LKILASGSVDGTVQLWDIN-N 903

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 LT          +SPD   +   S       + +     +   +  QD E   +
Sbjct: 904 GKCLAFLTGHTSWINRIVFSPDGQFLATTSK---DTNIKIWDVANAKCLKTLQDHEEEVW 960

Query: 351 DPVWSPQGD 359
              +SP G 
Sbjct: 961 GVAFSPDGQ 969


>gi|119914124|ref|XP_594632.3| PREDICTED: WD repeat domain 20 isoform 2 [Bos taurus]
          Length = 508

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 63/227 (27%), Gaps = 32/227 (14%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN-------SLCV 195
           +F +    ++ + H+      +     +G    R+ FV+ +  SG            L  
Sbjct: 16  QFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYF 75

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
               G   R +  SR   +   ++ P  + +    +   ++    +  T    AP     
Sbjct: 76  YIYKGVRKRLIDKSRVTCV---KWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLL 132

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +                +   K ++     +        + T         ++SPD   
Sbjct: 133 KQGESF-----------AVHTCKSKSTRNPLL--------KWTVGEGALNEFAFSPDGKF 173

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +   S       L V   +  +     +          WSP G  I 
Sbjct: 174 LACVSQ---DGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIV 217



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 60/212 (28%), Gaps = 44/212 (20%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRF------SSNGKRALISVQKDEA 281
             +   + L   L  +   R  +   N +    +   F      S NG R   +V ++  
Sbjct: 15  TQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELY 74

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM---------- 331
             IY         +RL +         + P S  +   +   G   LY +          
Sbjct: 75  FYIYK-----GVRKRLID-KSRVTCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPH 128

Query: 332 ----------------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                             +  +        E +  +  +SP G  +A     G    + V
Sbjct: 129 YQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDG---FLRV 185

Query: 376 MKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
              D  +    ++     L    WSP G+ ++
Sbjct: 186 FNFDSVELHGTMKSYFGGLLCVCWSPDGKYIV 217


>gi|31317278|ref|NP_851825.1| WD repeat-containing protein 20 isoform 3 [Homo sapiens]
 gi|114654839|ref|XP_001163358.1| PREDICTED: hypothetical protein LOC453174 isoform 4 [Pan
           troglodytes]
          Length = 508

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 63/227 (27%), Gaps = 32/227 (14%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN-------SLCV 195
           +F +    ++ + H+      +     +G    R+ FV+ +  SG            L  
Sbjct: 16  QFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYF 75

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
               G   R +  SR   +   ++ P  + +    +   ++    +  T    AP     
Sbjct: 76  YIYKGVRKRLIDKSRVTCV---KWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLL 132

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +                +   K ++     +        + T         ++SPD   
Sbjct: 133 KQGESF-----------AVHTCKSKSTRNPLL--------KWTVGEGALNEFAFSPDGKF 173

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +   S       L V   +  +     +          WSP G  I 
Sbjct: 174 LACVSQ---DGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIV 217



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 60/212 (28%), Gaps = 44/212 (20%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRF------SSNGKRALISVQKDEA 281
             +   + L   L  +   R  +   N +    +   F      S NG R   +V ++  
Sbjct: 15  TQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELY 74

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM---------- 331
             IY         +RL +         + P S  +   +   G   LY +          
Sbjct: 75  FYIYK-----GVRKRLID-KSRVTCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPH 128

Query: 332 ----------------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                             +  +        E +  +  +SP G  +A     G    + V
Sbjct: 129 YQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDG---FLRV 185

Query: 376 MKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
              D  +    ++     L    WSP G+ ++
Sbjct: 186 FNFDSVELHGTMKSYFGGLLCVCWSPDGKYIV 217


>gi|28207897|emb|CAD62602.1| unnamed protein product [Homo sapiens]
          Length = 499

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 63/227 (27%), Gaps = 32/227 (14%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN-------SLCV 195
           +F +    ++ + H+      +     +G    R+ FV+ +  SG            L  
Sbjct: 7   QFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYF 66

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
               G   R +  SR   +   ++ P  + +    +   ++    +  T    AP     
Sbjct: 67  YIYKGVRKRLIDKSRVTCV---KWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLL 123

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +                +   K ++     +        + T         ++SPD   
Sbjct: 124 KQGESF-----------AVHTCKSKSTRNPLL--------KWTVGEGALNEFAFSPDGKF 164

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +   S       L V   +  +     +          WSP G  I 
Sbjct: 165 LACVSQ---DGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIV 208



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 60/212 (28%), Gaps = 44/212 (20%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRF------SSNGKRALISVQKDEA 281
             +   + L   L  +   R  +   N +    +   F      S NG R   +V ++  
Sbjct: 6   TQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELY 65

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM---------- 331
             IY         +RL +         + P S  +   +   G   LY +          
Sbjct: 66  FYIYK-----GVRKRLID-KSRVTCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPH 119

Query: 332 ----------------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                             +  +        E +  +  +SP G  +A     G    + V
Sbjct: 120 YQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDG---FLRV 176

Query: 376 MKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
              D  +    ++     L    WSP G+ ++
Sbjct: 177 FNFDSVELHGTMKSYFGGLLCVCWSPDGKYIV 208


>gi|317418822|emb|CBN80860.1| WD repeat-containing protein 51A [Dicentrarchus labrax]
          Length = 435

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 9/189 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            + + +G + + + + +       Y        +   +FSP+   VA A+ D    L V 
Sbjct: 1   MKQIATGSMDSCVMIWNMKPQMRAYRFDGHKDAVTFVQFSPSGHLVASASRDKTVRLWVP 60

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            M              RS+     FSS+G+  + +   D+ + +++V  Q      L   
Sbjct: 61  SMKAESTAFRAHTATVRSVN----FSSDGQTLV-TASDDKTIKVWTVHRQ-KFLFSLNQH 114

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +   N  D      +         + P G  
Sbjct: 115 INWVRCAKFSPDDRLIVSSSD---DKTIKLWDKNSRDCIHSFYEHAGYANHVDFHPSGTC 171

Query: 361 IAFTKFSGE 369
           IA +     
Sbjct: 172 IAASSTDNS 180



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 62/186 (33%), Gaps = 15/186 (8%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATER 296
           V + + +      R    +  +   +FS +G   + S  +D+ + ++   +  +S A   
Sbjct: 13  VMIWNMKPQMRAYRFDGHKDAVTFVQFSPSG-HLVASASRDKTVRLWVPSMKAESTAFR- 70

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WS 355
                    S ++S D   +V  SD    ++   + +    +   S ++  ++     +S
Sbjct: 71  --AHTATVRSVNFSSDGQTLVTASD----DKTIKVWTVHRQKFLFSLNQHINWVRCAKFS 124

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P   LI  +    +   +                       + PSG  +  S     D  
Sbjct: 125 PDDRLIV-SSSDDKTIKLWDKNSRDCIHSFYEHAGYANHVDFHPSGTCIAASST---DNS 180

Query: 416 SKLYSI 421
            K++ I
Sbjct: 181 VKVWDI 186


>gi|302819951|ref|XP_002991644.1| hypothetical protein SELMODRAFT_229638 [Selaginella moellendorffii]
 gi|300140493|gb|EFJ07215.1| hypothetical protein SELMODRAFT_229638 [Selaginella moellendorffii]
          Length = 307

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/228 (15%), Positives = 67/228 (29%), Gaps = 21/228 (9%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             + A       D          ++      GN   ++ A   S +G R       D  +
Sbjct: 27  GDRPAVLLTGSADESVKVWKGDELELERTNSGNSLGVV-AVAASPDG-RVAACTSLDSVV 84

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            I+ VD  S     L +         + P    +       G   ++   S   +    +
Sbjct: 85  RIFDVDSNSTLAT-LESKPAEAWQMQFHPKGELLAVAGGGSGCVNIWKASSGSRETSLKA 143

Query: 343 Q-----DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAP 395
           +               WSP G L+A +   G    I V      +    ++  ++  +  
Sbjct: 144 ESVDKVGGGKFVLSVAWSPDGKLLACSSMDGT---IAVFDVARGKMLHTLDGHSMPVRCL 200

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +SP     +F+   D      ++  D  GR+       A +    WV
Sbjct: 201 AFSPVEPRYLFTACDD----KHVHMYDAEGRSL----VSAMSGHASWV 240



 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 8/133 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++ V D     + +        +    FSP + +  +   DD+    V++ D        
Sbjct: 175 TIAVFDVARGKMLHTLDGHSMPVRCLAFSPVEPRYLFTACDDKH---VHMYDAEGRSLVS 231

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYS 310
            +    S +L+   S +G     S   D  + ++  DL++ +  + LT         ++ 
Sbjct: 232 AMSGHASWVLSVAGSPDGAALA-SASSDRTVRLW--DLKTRSCVQSLTEHKDQVWGVAFR 288

Query: 311 PDSSQIVFESDRE 323
           P         DR 
Sbjct: 289 P-GRLATVADDRS 300


>gi|239609669|gb|EEQ86656.1| extracellular dipeptidyl-peptidase Dpp4 [Ajellomyces dermatitidis
           ER-3]
 gi|327356189|gb|EGE85046.1| extracellular dipeptidyl-peptidase Dpp4 [Ajellomyces dermatitidis
           ATCC 18188]
          Length = 773

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 35/101 (34%), Gaps = 23/101 (22%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
              ++      +   +++D+        W P G+ IA+ +  G    I    KDG+  ++
Sbjct: 118 SNYFIQDVKTGELTPLAEDQAGDLQYAAWGPVGNTIAYVR--GNNLFIW---KDGTTTQI 172

Query: 386 LVEDS---NLQAPTW---------------SPSGRSLIFSR 408
             +         P W               SP G+SL F R
Sbjct: 173 TTDGGPDTFNGVPDWVYEEEIFGDRYAFWFSPDGKSLAFLR 213



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 34/134 (25%), Gaps = 30/134 (22%)

Query: 221 PNQQKVAYATYDDEDILRVY-----LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P+   V +AT   +     Y     + D +         +    +    +   G      
Sbjct: 97  PDLSAVMWATNYTKQYRHSYFSNYFIQDVKTGELTPLAEDQAGDLQYAAWGPVGNTIAYV 156

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASY---------------SPDSSQIV 317
             +   + I+    +   T ++T     +       +               SPD   + 
Sbjct: 157 --RGNNLFIW----KDGTTTQITTDGGPDTFNGVPDWVYEEEIFGDRYAFWFSPDGKSLA 210

Query: 318 FES-DREGKEQLYV 330
           F   D  G     +
Sbjct: 211 FLRFDETGVPTFTI 224



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 46/119 (38%), Gaps = 5/119 (4%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMK 377
           SD  G   +Y+    G     ++  +           + +LI +  TK    +  +  + 
Sbjct: 361 SDESGWAHIYLFPVKGGKPIALTSGEWEVTGIVSIDTERELIYYLSTKHHPTERHLYSVS 420

Query: 378 KDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               + + LV+D+     + ++S  G   I + +       +LYSID + +   +I + 
Sbjct: 421 YSTLKTKALVDDTVAAYWSASFSSKGGYYILTYRGPDVPYQELYSID-SPKPLRVITSN 478


>gi|219362619|ref|NP_001136763.1| hypothetical protein LOC100216905 [Zea mays]
 gi|194696962|gb|ACF82565.1| unknown [Zea mays]
          Length = 344

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/266 (12%), Positives = 81/266 (30%), Gaps = 31/266 (11%)

Query: 186 SGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG     + +    G      +       + + +++ +  ++  A+   +  LRV+  D 
Sbjct: 71  SGSHDKDIFLWLAHGECKNFMVLRGHKNAILDLQWTTDGTQIISAS--PDKTLRVW--DV 126

Query: 245 RIDRAPKRIGNFRSMILA--PR--FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              +  K++    S + +  P   +       ++S   D    ++  DL+     +    
Sbjct: 127 ETGKQVKKMAEHSSFVNSCCPARKWPP----LVVSGSDDGTAKLW--DLRQRGAIQTLPD 180

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +   + S+S  + + VF    +    +       ++     +  +        SP G  
Sbjct: 181 KYQITAVSFSEAADK-VFTGGLD--NDVKWWDLRKNEVTEHLKGHQDMITGMQLSPDGSY 237

Query: 361 IAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDGD 413
           +       E   + +     +    + L    +         +WSP  R +       G 
Sbjct: 238 LLTNAMDNELKIWDLRPYAPENRNIKTLTGHQHNFEKNLLKCSWSPDNRKV-----TAGS 292

Query: 414 TGSKLYSIDLNGRNETLINTPAYASD 439
               +Y  D   R   L   P +   
Sbjct: 293 ADRMVYIWDTTSR-RILYKLPGHNGS 317


>gi|47229875|emb|CAG07071.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 399

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 75/204 (36%), Gaps = 15/204 (7%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N +++A ++ D      V + +T+      R    +  +L+ +FS +G   + S  +D+ 
Sbjct: 23  NMKQIATSSLDS----CVMIWNTKAQMRAYRFNGHKDAVLSVQFSPSG-HLVASSSRDKT 77

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + ++  +L+   +           S ++S D   +V  SD +   +++ +      +  +
Sbjct: 78  VRLWVPNLK-AESTSFRAHTASVRSVNFSGDGQTLVTASD-DKTVKIWTVHR---QKFVL 132

Query: 342 SQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           S ++  ++     +SP   LI  +    +   +                       + PS
Sbjct: 133 SLNQHINWVRCAKFSPDDRLIV-SSSDDKTVKLWDKNSRECIHSFYEHAGYATCVAFHPS 191

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLN 424
           G  +        D   KL+ I  +
Sbjct: 192 GTCIAAGST---DHSVKLWDIRTH 212



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 71/207 (34%), Gaps = 14/207 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y        +   +FSP+   VA ++ D    L V  +            + RS+     
Sbjct: 48  YRFNGHKDAVLSVQFSPSGHLVASSSRDKTVRLWVPNLKAESTSFRAHTASVRSVN---- 103

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G+  + +   D+ + I++V  Q      L   +     A +SPD   IV  SD   
Sbjct: 104 FSGDGQTLV-TASDDKTVKIWTVHRQKFVLS-LNQHINWVRCAKFSPDDRLIVSSSD--- 158

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQ 382
            + + +   N  +      +         + P G  IA          + I   K     
Sbjct: 159 DKTVKLWDKNSRECIHSFYEHAGYATCVAFHPSGTCIAAGSTDHSVKLWDIRTHKM---L 215

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           +   V    + + ++ P+G  LI +  
Sbjct: 216 QHYQVHCGVVNSLSFHPAGNFLITASS 242


>gi|332879955|ref|ZP_08447639.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332681951|gb|EGJ54864.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 650

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 64/200 (32%), Gaps = 53/200 (26%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G + + +                    + T   + +            ++ +DR+     
Sbjct: 168 GDKVVFTAANSGKT-------SKGGVSQWTGESYYD------------LYMADRD----- 203

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-- 386
                +       + +   +    V++  G+ + FT+ +     +G   ++    ++L  
Sbjct: 204 -KQNLSNKKFFSTTVNTPFNESTAVFTKDGNTMYFTRNNYVNRKVGTDFENTILLKILRA 262

Query: 387 -----------------VEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNE 428
                             +D N+  P  SP  + L F+    G  G S +Y +++ G N+
Sbjct: 263 TKDSNGEWGNVVELPFNSDDYNIAHPALSPDEKFLYFASDMKGSLGESDIYRVEILGDNQ 322

Query: 429 T--------LINTPAYASDP 440
                    +INTP   S P
Sbjct: 323 YGTPENLGDIINTPGRESFP 342


>gi|310798459|gb|EFQ33352.1| WD40 domain-containing protein [Glomerella graminicola M1.001]
          Length = 516

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 71/210 (33%), Gaps = 30/210 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----SSNGKRAL 273
           R+SP  +++     ++     + +           I N  +  L P F    SS+     
Sbjct: 57  RWSPCSRRILACFAEE-----IRVYAASAPGYHAVIRNPATPNLKPTFVQFGSSD-AEVF 110

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-----YSPDSSQIVFESDREGKEQL 328
           +         I+  DL +++T  +TN  F   +A+       PDSS +   +   GK+ +
Sbjct: 111 MCSSYGLKFSIF--DLAASSTVEITNPKFYQAAAASRGFALRPDSSHLAILTRVAGKDIV 168

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +         R  Q   A      W+P G  +   + + +   I     DG   +    
Sbjct: 169 SIHHPKTRGVLRSWQPDTADAQALTWTPDGRWLVIWESAAQGHKILFYTPDGHLFKTWSG 228

Query: 389 DSNLQ-------------APTWSPSGRSLI 405
            S+++             A   SP G  L 
Sbjct: 229 PSSIEAEDQHYELGAGVKACQLSPDGARLA 258


>gi|322836740|ref|YP_004210654.1| prolyl oligopeptidase [Acidobacterium sp. MP5ACTX9]
 gi|321165827|gb|ADW71527.1| peptidase S9, prolyl oligopeptidase [Acidobacterium sp. MP5ACTX9]
          Length = 611

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/243 (19%), Positives = 82/243 (33%), Gaps = 23/243 (9%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D  +   + SPN   +AY     E  + V++     +       +    I   ++  +G+
Sbjct: 18  DPEMAYAQLSPNGNMLAYLA-PVEGKVGVWVRTIGQENDRVVARDALRPIPWAQWQGDGQ 76

Query: 271 RALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISA-----SYSPDSSQIVFESDRE 323
             L     + DE   ++ V L  +    LT               Y PD   I   +   
Sbjct: 77  HVLYLQDSRGDENYHLFRVGLLGHEPMDLTPVPGARALPLAIDFRY-PDEGLITMNARTP 135

Query: 324 GKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGD---LIAFTKFSGEKFAIGVMKKD 379
               ++ +  + GS+   I    +      +W          A  + +G  FAI V    
Sbjct: 136 SLMDVHRVNFATGSNLLDIENPGD----VQLWLADNMLQVRAAVAQIAGGNFAIRVRDVA 191

Query: 380 GSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTP 434
           GS+ R+L      D   +   +SP  R L ++         +L   +L +G   T    P
Sbjct: 192 GSEWRVLDEIAFADGRPRLVAFSPDNRFL-YAITAKNANADRLVQYELSSGAVATRFEDP 250

Query: 435 AYA 437
           AY 
Sbjct: 251 AYD 253


>gi|297734627|emb|CBI16678.3| unnamed protein product [Vitis vinifera]
          Length = 530

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/258 (15%), Positives = 82/258 (31%), Gaps = 43/258 (16%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +   +  +  D      + L D        R    +   L  R    G    + +  
Sbjct: 75  WSKDGHCILVSAADK----SLTLWDVVSGEKITR-TTLQQTPLQARLHP-GSAKSLCLAC 128

Query: 279 DEAMDIYSVDLQSNATERL--------------TNTLFINISASYSPDS------SQIVF 318
             +     VDL + +T  L              +   F + S  ++P +        +V+
Sbjct: 129 PLSSAPMIVDLNTGSTTVLPVSVSDTGAGLPPPSRNKFSDGSPPFTPTAACFNKYGDLVY 188

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIG--- 374
             + +G  ++ ++       + +      S   + V+S  G  +  T  +     I    
Sbjct: 189 VGNSKG--EILIVDHKNKQVRAVVPISGGSVIKNIVFSRNGQYLL-TNSNDRTIRIYENL 245

Query: 375 VMKKDGSQERLLVEDS-------NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           +  KDG +   L  D        + + P +S  G  ++      G+   K+Y  D  G  
Sbjct: 246 LPLKDGLKCLALFRDFQDSITKIHWKVPCFSGDGEWVVGGSASKGE--HKIYIWDRAGHL 303

Query: 428 ETLINTPAYA-SDPQWVG 444
             ++  P  A  D  W  
Sbjct: 304 VKILEGPKEALIDLAWHP 321



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 45/290 (15%), Positives = 86/290 (29%), Gaps = 43/290 (14%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHT------ISDDIYQSITGEKGDFNSRILFV 180
              LWDV   ++I       +P   R    +              +  +    ++ +L V
Sbjct: 90  SLTLWDVVSGEKITRTTLQQTPLQARLHPGSAKSLCLACPLSSAPMIVDLNTGSTTVLPV 149

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S S     +         DG+     T                  + Y      +IL V 
Sbjct: 150 SVSDTGAGLPPPSRNKFSDGSPPFTPTA---------ACFNKYGDLVYVGNSKGEILIVD 200

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNATERLT 298
             + ++       G      +   FS NG+  L +   D  + IY   + L+    + L 
Sbjct: 201 HKNKQVRAVVPISGGSVIKNI--VFSRNGQYLL-TNSNDRTIRIYENLLPLKDG-LKCLA 256

Query: 299 NTLFINIS--------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                  S          +S D   +V  S  +G+ ++Y+    G   K I +  + +  
Sbjct: 257 LFRDFQDSITKIHWKVPCFSGDGEWVVGGSASKGEHKIYIWDRAGHLVK-ILEGPKEALI 315

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           D  W P   ++     +G  +             +  +D       ++P 
Sbjct: 316 DLAWHPVHPIVVSVSLTGLVY-------------IWAKDYTENWSAFAPD 352


>gi|241958854|ref|XP_002422146.1| probable ARP2/3 complex subunit, putative [Candida dubliniensis
           CD36]
 gi|223645491|emb|CAX40148.1| probable ARP2/3 complex subunit, putative [Candida dubliniensis
           CD36]
          Length = 384

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 70/246 (28%), Gaps = 41/246 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    D+ +     SP+  K+   + D      V+  +    +    +          R+
Sbjct: 54  VLKDHDKTVTSVDISPDGSKILTCSQD--RNALVWEYNNGEYKPTLVLLRINRAATVCRW 111

Query: 266 SSNGKR---------ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY------S 310
           S +G +           +   ++E     S  L+      +T    I+   +       S
Sbjct: 112 SPDGSKFAVGSSDRIIAVCYYEEENDWWVSKHLKKPLKSTITT---IDWHPNGVLLACGS 168

Query: 311 PDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVW------SPQGDLI 361
            D    VF    +G   K    V    G+     +   + +     W      SP G+ +
Sbjct: 169 TDGHVRVFSGYIKGIDAKPDPSVW---GTKLPFQTLCGDYTNETNAWIHGVKFSPDGNAL 225

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKL 418
           A+         +     +G   R +        P      +S+++   +    G     L
Sbjct: 226 AYVSHDSSVGFVYPQ-GEGLPPRAIFNVKTDNLPF-----KSIVWLNDQQVCAGGFTCNL 279

Query: 419 YSIDLN 424
                +
Sbjct: 280 VVFQGD 285


>gi|73985525|ref|XP_862174.1| PREDICTED: similar to N-acylaminoacyl-peptide hydrolase isoform 10
           [Canis familiaris]
          Length = 717

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 63/188 (33%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D +  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 224 LCVLDVESGNISVLEGVPESVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRFCTNRRSALY 283

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNA-- 293
            +D    +  + + +    + +PR S +  R +               +   D  +    
Sbjct: 284 YVDLTGGQC-ELLSDDSLAVSSPRLSPDQCRIVYLRYPSLVPHHQCSQLCLYDWYTKVTS 342

Query: 294 ------TERLT-NTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  N   I  S      +S DS ++VF+S +  ++ L+V+ +       ++
Sbjct: 343 VVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFVVDTQMGSVTSLT 402

Query: 343 QDKEASYF 350
                  +
Sbjct: 403 AGGSGGSW 410



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 39/143 (27%), Gaps = 21/143 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----- 326
                 +     +Y VDL     E L++      S   SPD  +IV+             
Sbjct: 272 IRFCTNR--RSALYYVDLTGGQCELLSDDSLAVSSPRLSPDQCRIVYLRYPSLVPHHQCS 329

Query: 327 QLYVMQ--------SNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIG 374
           QL +                +++ ++    Y        WS     + F      +  + 
Sbjct: 330 QLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLF 389

Query: 375 VMKKDGSQERLLVEDSNLQAPTW 397
           V+         L    +    +W
Sbjct: 390 VVDTQMGSVTSLTAGGSGG--SW 410


>gi|73985519|ref|XP_862095.1| PREDICTED: similar to N-acylaminoacyl-peptide hydrolase isoform 7
           [Canis familiaris]
          Length = 689

 Score = 48.5 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 63/188 (33%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D +  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 224 LCVLDVESGNISVLEGVPESVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRFCTNRRSALY 283

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNA-- 293
            +D    +  + + +    + +PR S +  R +               +   D  +    
Sbjct: 284 YVDLTGGQC-ELLSDDSLAVSSPRLSPDQCRIVYLRYPSLVPHHQCSQLCLYDWYTKVTS 342

Query: 294 ------TERLT-NTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  N   I  S      +S DS ++VF+S +  ++ L+V+ +       ++
Sbjct: 343 VVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFVVDTQMGSVTSLT 402

Query: 343 QDKEASYF 350
                  +
Sbjct: 403 AGGSGGSW 410



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 39/143 (27%), Gaps = 21/143 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----- 326
                 +     +Y VDL     E L++      S   SPD  +IV+             
Sbjct: 272 IRFCTNR--RSALYYVDLTGGQCELLSDDSLAVSSPRLSPDQCRIVYLRYPSLVPHHQCS 329

Query: 327 QLYVMQ--------SNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIG 374
           QL +                +++ ++    Y        WS     + F      +  + 
Sbjct: 330 QLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLF 389

Query: 375 VMKKDGSQERLLVEDSNLQAPTW 397
           V+         L    +    +W
Sbjct: 390 VVDTQMGSVTSLTAGGSGG--SW 410


>gi|302769704|ref|XP_002968271.1| hypothetical protein SELMODRAFT_169971 [Selaginella moellendorffii]
 gi|302788672|ref|XP_002976105.1| hypothetical protein SELMODRAFT_443046 [Selaginella moellendorffii]
 gi|300156381|gb|EFJ23010.1| hypothetical protein SELMODRAFT_443046 [Selaginella moellendorffii]
 gi|300163915|gb|EFJ30525.1| hypothetical protein SELMODRAFT_169971 [Selaginella moellendorffii]
          Length = 312

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 78/208 (37%), Gaps = 15/208 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++       + +   +FSP+ + +  ++ D      + L      +  K +      I
Sbjct: 14  YALKMTLTGHQKAVSSVKFSPDGKLLGSSSADK----TIKLWSADDGKLLKTLQGHSEGI 69

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE 319
               +SS+ +    S   D+ + ++  D +++   ++       +   +++P SS I   
Sbjct: 70  SDLAWSSDSRYVC-SASDDKTLRVW--DCETSECLKILKGHTNFVFCVNFNPQSSVIASG 126

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         ++            ++  G LI  + + G    I    + 
Sbjct: 127 SY---DETVRLWDVKTGKCLKVLPAHSDPVTAVHYNRDGSLIVSSSYDG-LMRIW-DSQT 181

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLI 405
           G+  + L++D N  +    +SP+G+ ++
Sbjct: 182 GNCLKTLIDDENPPVSFVKFSPNGKFIV 209



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 9/161 (5%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +   +  + + +FS +GK  L S   D+ + ++S D      + L          ++S D
Sbjct: 20  LTGHQKAVSSVKFSPDGK-LLGSSSADKTIKLWSAD-DGKLLKTLQGHSEGISDLAWSSD 77

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S  +   SD    + L V     S+  +I +      F   ++PQ  +IA   +  E   
Sbjct: 78  SRYVCSASD---DKTLRVWDCETSECLKILKGHTNFVFCVNFNPQSSVIASGSYD-ETVR 133

Query: 373 IGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDG 412
           +  +K  G   ++L   S+ + A  ++  G  ++ S   DG
Sbjct: 134 LWDVKT-GKCLKVLPAHSDPVTAVHYNRDGSLIV-SSSYDG 172


>gi|255725962|ref|XP_002547907.1| hypothetical protein CTRG_02204 [Candida tropicalis MYA-3404]
 gi|240133831|gb|EER33386.1| hypothetical protein CTRG_02204 [Candida tropicalis MYA-3404]
          Length = 513

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/330 (15%), Positives = 94/330 (28%), Gaps = 44/330 (13%)

Query: 120 GKDRLRVEFRLWDVKDRKQI----IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
               +    RLWD K  K +    +G   + S  SW  + H +  +    +     D   
Sbjct: 198 ATGSMDNTIRLWDAKTGKSLGKPLVGHSKWVSSLSWEPL-HLVGVNDQPRLVSGSKDGTI 256

Query: 176 RILFVSES----VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           ++   +       +SG      CV    G+NI Y       I      S N + +     
Sbjct: 257 KVWDTTSRNCVLTMSGHTNAVSCV-KWSGSNIVYSASHDKTIKSW-DISANGKCI---QT 311

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-----------------NG--KRA 272
                  V  +    D   ++ G   +   +  +S                  NG     
Sbjct: 312 LKSHAHWVNHLSLSTDYVLRKGGFDHTTTRSTEYSPEELRSRALQNYEKVAKLNGVITER 371

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L++   D  M  +     S    R+T    +    ++SPD   +V  S       + +  
Sbjct: 372 LVTASDDFTMYFWEPLKSSKPILRMTGHQKLVNHVNFSPDGRYVVSSSF---DNSIKLWD 428

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +   A  +   WS    L+           + V      +  + +     
Sbjct: 429 GIRGTFISTLRGHVAPVYQTAWSADNRLLVSCSKDTT---LKVWDIRTKKLSVDLPGHAD 485

Query: 393 QAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
           +     WS  G+ +        D   +L+S
Sbjct: 486 EVYAVDWSLDGKRVA---SGGKDKMIRLWS 512



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/194 (13%), Positives = 66/194 (34%), Gaps = 22/194 (11%)

Query: 209 SRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                +    FSP +  ++   +   +   R++  +T+       +    + +L   +S 
Sbjct: 137 GHGSTILCIAFSPNDSSRM--CSGAGDSTARIWDCNTQTPLVT--LSGHTNWVLCVTYSP 192

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP-------DSSQIVF 318
           +GK    +   D  + ++  D ++  +  + L        S S+ P       D  ++V 
Sbjct: 193 DGKIIA-TGSMDNTIRLW--DAKTGKSLGKPLVGHSKWVSSLSWEPLHLVGVNDQPRLVS 249

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S ++G   + V  +   +          +     WS  G  I ++    +      +  
Sbjct: 250 GS-KDGT--IKVWDTTSRNCVLTMSGHTNAVSCVKWS--GSNIVYSASHDKTIKSWDISA 304

Query: 379 DGSQERLLVEDSNL 392
           +G   + L   ++ 
Sbjct: 305 NGKCIQTLKSHAHW 318


>gi|239933733|ref|ZP_04690686.1| peptidase S9 prolyl oligopeptidase [Streptomyces ghanaensis ATCC
           14672]
 gi|291442138|ref|ZP_06581528.1| peptidase S9 [Streptomyces ghanaensis ATCC 14672]
 gi|291345033|gb|EFE71989.1| peptidase S9 [Streptomyces ghanaensis ATCC 14672]
          Length = 609

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 62/177 (35%), Gaps = 11/177 (6%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           + +PR + +  R + +   D   +I++ D  S    +LT+     +  +   D +   F+
Sbjct: 22  VTSPR-NPD--RMVYTGDADGRCEIFTWDRSSGGGRQLTDRPHGTLLCAIDGDEAVWWFD 78

Query: 320 SDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            DR G         +G  D+  +             + +G  +A      E F++ + ++
Sbjct: 79  EDRGGSGGWRTQDFDGGPDRPALLDVPCGRPAGLALTERGT-VAVGIRGSEGFSVHLGRR 137

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID------LNGRNET 429
            G    +L    +      +P G  L  +          L + D      L+G  E 
Sbjct: 138 GGRGTPVLRTTDSATLCDLAPDGGLLAVTGPAHSARAVTLLTPDGSTAAVLSGTRER 194


>gi|271965053|ref|YP_003339249.1| hypothetical protein Sros_3572 [Streptosporangium roseum DSM 43021]
 gi|270508228|gb|ACZ86506.1| hypothetical protein Sros_3572 [Streptosporangium roseum DSM 43021]
          Length = 384

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 64/192 (33%), Gaps = 27/192 (14%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSV 287
                RV  +       P+ +G   S    P+F     S +G+        +++   + V
Sbjct: 107 RNGKWRVVALSGETYHLPQALGTL-STKSGPKFYPLAISRDGRIIAY---YNQSAKTFKV 162

Query: 288 -DLQSNATERLTNTLFI-------NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            DL S   +  T  + I       N     S D   + F      KE   ++        
Sbjct: 163 RDLASGTEQ--TAPVAIAEAELGGNAHLELSDDGRYLAFTGYPSRKEDGLLIDM------ 214

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           R            + S  G  +   ++   GEK  I VM   G    + V+++  +    
Sbjct: 215 RARTTTPLPVGWDLRSIDGTTVTLARYGRYGEKPGIWVMPLAGGGSPITVDETYTRFSAL 274

Query: 398 SPSGRSLIFSRK 409
           +P+G ++   R+
Sbjct: 275 APNGAAVAALRR 286


>gi|156550101|ref|XP_001605730.1| PREDICTED: similar to wd-repeat protein [Nasonia vitripennis]
          Length = 652

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 71/199 (35%), Gaps = 29/199 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R   + +++A    + +D+L V +MD +   + + +      +    FS + +  L+S  
Sbjct: 358 RMMKDGEQLADVDREADDVL-VRMMDEKTAESVRTLYGHSGPVYCLSFSPD-RNLLLSCS 415

Query: 278 KDEAMDIYSVDLQSNATERLTN------TLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           +D  + ++S+          T        LF   S  +SP           +   +L+  
Sbjct: 416 EDGTVRLWSLHT-------WTCVVCYKGHLFPVWSVRFSPHGYYFA-TGSHDKTARLWA- 466

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDS 390
            ++     RI     +      + P  + IA          I +     G+Q RL+    
Sbjct: 467 -TDSHQPLRIFAGHYSDVDVVQFHPNSNYIA---SGSSDMTIRLWDCVSGNQVRLMT--- 519

Query: 391 NLQAP----TWSPSGRSLI 405
             +AP     +S  GR L 
Sbjct: 520 GHKAPIYALAFSIEGRFLA 538


>gi|33331711|gb|AAQ11020.1| mesocentin [Caenorhabditis briggsae]
          Length = 13133

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/285 (15%), Positives = 80/285 (28%), Gaps = 48/285 (16%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV------AYATYDDEDILRVYLMDTRI 246
              ++  D    + L    +  +  P  +P+   +      AY + D   I ++       
Sbjct: 8644 YILVPSDEETPKALPTDSEGNVVYPITNPDGTPLGTDSSGAYVSQDGSVIEKIEDGKPVG 8703

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRA--------LISVQKDEAMDIYSVDLQSNATERLT 298
                    +     + P    +G+          +  V+  +      +    +      
Sbjct: 8704 PDGQVLPTDASGNYIYPVVGPDGQVLPTDATGKTVYPVRGPDGTP---LPTDGSGAVIGP 8760

Query: 299  NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            +   I    S    S D S +   +D  G   L  + +     K +  D E +   P+ +
Sbjct: 8761 DGEPIPTDPSGKPLSKDGSPL--PTDASGNYIL--VPAEEETTKTLPTDSEGNVIYPITN 8816

Query: 356  PQGDLI------AFTKFSGEKFAIGVMKKDG------SQERLLVEDSNLQAPTWSPSGRS 403
            P G  +      AF    G         +DG       Q     E  N   P   P G+ 
Sbjct: 8817 PDGTPLGTDSSGAFVTQDGTVIE---KNEDGKPVGPDGQVLQTDESGNYIYPAVGPDGQV 8873

Query: 404  LIFSRKKDGDT-------GSKLYSIDLNGRNETLINTPAYASDPQ 441
            L       G T         ++   D  G++   +  P     P 
Sbjct: 8874 L--PTDATGKTVYPAVGPDGQVLPTDGTGKHVYPVRGPDGTPLPT 8916



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 75/249 (30%), Gaps = 36/249 (14%)

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +S  +FV++             +  DG+    L          P   P+ Q +       
Sbjct: 6569 DSTGVFVTDDGQVVEKDEDGKPIGPDGS---VLPTDDSGNYIYPAVDPDGQVL------P 6619

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRAL---ISVQKDEAMDIY 285
             D  R  +             +    ++ P         +GK       S+  D + +  
Sbjct: 6620 TDASRKPIYPVHGADGTPLPTDSDGNVIGPDGEPIPTDASGKPLAKDGSSLPTDASGNFV 6679

Query: 286  SVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGK-----EQLYVMQSNGSDQ- 338
             V      T+ L T++    +    +PD + +   +D  GK      Q+      G    
Sbjct: 6680 LVPSDEVTTKVLPTDSEGAEVYPVINPDGTPLA--TDSTGKFVTEDGQIIETDEEGKPVG 6737

Query: 339  ---KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
               + +  D   +Y  PV  P G ++         + +     DG+   LL + +     
Sbjct: 6738 PDGQVLPTDASGNYIYPVVGPDGQVLPTDSNGNPIYPVF--GPDGTP--LLTDATGA--- 6790

Query: 396  TWSPSGRSL 404
               P G  +
Sbjct: 6791 VIGPDGEPI 6799



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 68/265 (25%), Gaps = 60/265 (22%)

Query: 206   LTPSRDQILFEPRFSPNQQKVA------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
             L       +  P   P+ + +A      + T D E I R                +    
Sbjct: 10008 LPTDEAGNIIYPIVKPDGKLLATDTTGAFVTDDGEIIERDEEGKPVGPDGSVLPTDASGN 10067

Query: 260   ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              + P    +G+         +    +   ++      L         A   PD   I   
Sbjct: 10068 YIYPAVGPDGQVL-----PTDGTGKHVYPVRGPDGTPLPTDAS---GAVIGPDGEPI--P 10117

Query: 320   SDREGKE--------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI---- 361
             +D  GK                  ++ +     K +  D E +   P+ +P G  +    
Sbjct: 10118 TDASGKPLSKDGSPLPTDASGNYILVPAEEETAKALPTDSEGNVIYPITNPDGTPLGTDS 10177

Query: 362   --AFTKFSGEKFAIGVMKKDG------SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
               AF    G         +DG       Q     +  N   P   P G+ L         
Sbjct: 10178 SGAFVTQDGSVIE---QNEDGKPVGPDGQVLPTDDSGNYIYPVVGPDGQVL--------- 10225

Query: 414   TGSKLYSIDLNGRNETLINTPAYAS 438
                     D  G+    ++ P  + 
Sbjct: 10226 ------PTDSTGKTVHPVSGPDGSP 10244



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 71/245 (28%), Gaps = 38/245 (15%)

Query: 179  FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---------A 229
            +V+ +            +  DG+    L          P   P+ + +A           
Sbjct: 5570 YVTTTGEIIEKDGEGKPLGPDGS---VLPTDGSGNYIYPAIGPDGEPLATDASGKTVYPV 5626

Query: 230  TYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSS-----NGKRALISVQKDEAMD 283
               D   L        I    + I  +     LA   S      +G   LI   ++    
Sbjct: 5627 HGSDGSPLPTDASGAVIGPDGEPIPTDASGKPLAKDGSPLPTDASGNYVLIPSDEETTKA 5686

Query: 284  IYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + + D   N    +T      L  + S ++  D  QIV E D  GK         G D +
Sbjct: 5687 LPT-DDSGNVIYPITRPDGTLLGTDSSGNFVADDGQIV-ERDESGKPM-------GPDGQ 5737

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
             +  D   +Y  P   P G  +A       +    V   DGS        ++       P
Sbjct: 5738 VLPTDDSGNYIYPAVGPDGQTLANVSTI--QHVYSVHGSDGSPL-----PTDASGAVIGP 5790

Query: 400  SGRSL 404
             G  +
Sbjct: 5791 DGEPI 5795



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 71/248 (28%), Gaps = 34/248 (13%)

Query: 174   NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             +S   F++E      I      +  DG   + L          P   P+ Q +       
Sbjct: 10973 DSTGKFITEEGQVVQIDEEGKPVGPDG---QVLPTDASGNYIYPAIGPDGQVL------P 11023

Query: 234   EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRAL-----ISVQKDEAMD 283
              D     +   R         N    ++ P         +GK        +    D    
Sbjct: 11024 TDSTGKTVYPVRGPDGTPLPTNASGAVIGPDGEPIPTDASGKPLAKDGSPLPTDNDGNYI 11083

Query: 284   IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG----KEQLYVMQSN---GS 336
             + S D  +      T++    I     PD + +V +S  E      + +    +    G 
Sbjct: 11084 LVSSDESTTKVLP-TDSEGNVIYPITMPDGTPLVTDSTGEYLTEDGQAIVRDDTGKPLGP 11142

Query: 337   DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             D + +  D   +Y  PV  P G ++         + +     DG+        ++     
Sbjct: 11143 DGQVLPTDASGNYIYPVVGPDGQVLPTDSTGKTVYPVR--GPDGTPL-----STDASGAV 11195

Query: 397   WSPSGRSL 404
               P G  +
Sbjct: 11196 IGPDGEPI 11203



 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 67/217 (30%), Gaps = 26/217 (11%)

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ--------K 225
            +S   FV++   +    +    +  DG N   L          P   P+ Q        K
Sbjct: 3590 DSTGAFVTDDGKTIEKDSDGKPLGPDGQN---LPTDDIGNYIYPAVGPDGQVLPTDASGK 3646

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
              Y+    +        +  +    + I    +       S +G     ++  D + +  
Sbjct: 3647 PIYSVRGSDGTPLPTDSEGNVGPDGEPI---PTDASGKPLSKDGS----TLPTDASGNYV 3699

Query: 286  SVDLQSNATERL-TNTLFINISASYSPDSSQIV---FESDREGKEQLYVMQSNGSDQKR- 340
             +  +   T+ L T+++   I     PD + +    + S    +  +      G+     
Sbjct: 3700 LIPTEEETTKALPTDSVGNVIYPIIKPDGTPLATDSYGSHVTDEGHVIEKDDEGNPVGPD 3759

Query: 341  ---ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
               +  D+  +Y  P   P G ++A        + + 
Sbjct: 3760 GSVLPTDESGNYIYPAVGPDGQVLATDSTGKTVYPVR 3796



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 71/250 (28%), Gaps = 36/250 (14%)

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +S   FV++   +         +  DG+    L          P   P+ Q +       
Sbjct: 4169 DSTGAFVTQDGSTIDKDEDGKPLGPDGS---VLPTDNSGNYIYPVIGPDGQPL------P 4219

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSN--GKRALISVQK---DEAMDIY 285
             D     +   R         +    ++ P     S++  GK           D      
Sbjct: 4220 TDASGNQIYPVRGPDGTPLPTDSDGNVIGPDGEPISTDASGKPLAKDGSPLPTDNNGHYI 4279

Query: 286  SVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGK-----EQLYVMQSNGSDQK 339
             V    + T+ L T++    +     PD + +   +D  GK      Q+  +   G    
Sbjct: 4280 LVPTGDDTTKALPTDSEGNVVYPITKPDGTPL--GTDSTGKFITEEGQVVEIDEEGKPVG 4337

Query: 340  R----ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                 +  D   +Y  P   P G ++         + +     DG+        ++    
Sbjct: 4338 PDGAVLPTDASGNYIYPAVGPDGQVLPTDSTGKTVYPVR--GPDGTPL-----PTDASGV 4390

Query: 396  TWSPSGRSLI 405
               P G  ++
Sbjct: 4391 VIGPDGEPIV 4400



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 71/243 (29%), Gaps = 34/243 (13%)

Query: 179  FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
            FV++   S            DG   + L    D     P   P+ Q +       + +  
Sbjct: 8540 FVTDEGESIDKNEDGKPTGPDG---QVLPTDADGNYIYPAVGPDGQVLP-TDDSGKPVYP 8595

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRALISVQK---DEAMDIYSVDLQ 290
            V+  D           +    ++ P         +GK           D + +   V   
Sbjct: 8596 VHRSDGAP-----LPTDASGAVIGPDGEPIPTDASGKPLAKDGSPLLTDASGNYILVPSD 8650

Query: 291  SNATERL-TNTLFINISASYSPDSSQI------VFESDREGKEQLYVMQ--SNGSDQKRI 341
                + L T++    +    +PD + +       + S  +G     +      G D + +
Sbjct: 8651 EETPKALPTDSEGNVVYPITNPDGTPLGTDSSGAYVSQ-DGSVIEKIEDGKPVGPDGQVL 8709

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
              D   +Y  PV  P G ++         + +     DG+   L  + S        P G
Sbjct: 8710 PTDASGNYIYPVVGPDGQVLPTDATGKTVYPVR--GPDGTP--LPTDGSGA---VIGPDG 8762

Query: 402  RSL 404
              +
Sbjct: 8763 EPI 8765



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 65/214 (30%), Gaps = 38/214 (17%)

Query: 240   YLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
             Y++ + ++   K +  +    I+ P    +G                 +   S       
Sbjct: 10720 YVLGSSVEDTTKALPTDESGNIIYPIVRPDGT---------------LLPTDSTGAFLTE 10764

Query: 299   NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             +  FI          PD   +   +D  G    Y+  +  SD + +  D E     P+ S
Sbjct: 10765 DGEFIERDDEGKPIGPDGQIL--PTDASGN---YIYPAASSDGQVLPTDDEGEVIYPITS 10819

Query: 356   PQGDLIAFTK----FSGEKFAIGVMKKD---GSQERLLVED--SNLQAPTWSPSGRSLIF 406
             P G  +A        + ++  I         G   ++L  D   N   P  +P G+ L  
Sbjct: 10820 PDGTPLATDSTGRFVNEDRQVIERDDTGKPVGPDGQVLRTDAFGNYIYPAVAPDGQLLA- 10878

Query: 407   SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                    +G  +Y +          ++      P
Sbjct: 10879 ----TDASGKPIYPVRGPDGTLLPTDSEGNVIGP 10908


>gi|73985521|ref|XP_862121.1| PREDICTED: similar to N-acylaminoacyl-peptide hydrolase isoform 8
           [Canis familiaris]
 gi|73985523|ref|XP_862148.1| PREDICTED: similar to N-acylaminoacyl-peptide hydrolase isoform 9
           [Canis familiaris]
          Length = 631

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 63/188 (33%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D +  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 123 LCVLDVESGNISVLEGVPESVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRFCTNRRSALY 182

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNA-- 293
            +D    +  + + +    + +PR S +  R +               +   D  +    
Sbjct: 183 YVDLTGGQC-ELLSDDSLAVSSPRLSPDQCRIVYLRYPSLVPHHQCSQLCLYDWYTKVTS 241

Query: 294 ------TERLT-NTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  N   I  S      +S DS ++VF+S +  ++ L+V+ +       ++
Sbjct: 242 VVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFVVDTQMGSVTSLT 301

Query: 343 QDKEASYF 350
                  +
Sbjct: 302 AGGSGGSW 309



 Score = 43.1 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 39/143 (27%), Gaps = 21/143 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----- 326
                 +     +Y VDL     E L++      S   SPD  +IV+             
Sbjct: 171 IRFCTNR--RSALYYVDLTGGQCELLSDDSLAVSSPRLSPDQCRIVYLRYPSLVPHHQCS 228

Query: 327 QLYVMQ--------SNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIG 374
           QL +                +++ ++    Y        WS     + F      +  + 
Sbjct: 229 QLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLF 288

Query: 375 VMKKDGSQERLLVEDSNLQAPTW 397
           V+         L    +    +W
Sbjct: 289 VVDTQMGSVTSLTAGGSGG--SW 309


>gi|332519004|ref|ZP_08395471.1| peptidase S9B dipeptidylpeptidase IV domain protein [Lacinutrix
           algicola 5H-3-7-4]
 gi|332044852|gb|EGI81045.1| peptidase S9B dipeptidylpeptidase IV domain protein [Lacinutrix
           algicola 5H-3-7-4]
          Length = 729

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/127 (13%), Positives = 53/127 (41%), Gaps = 8/127 (6%)

Query: 281 AMDIYSVDLQSNATERLT---NTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +D++S+D ++N    +    +  +I++  + ++  D    ++ S+++G   +Y     G
Sbjct: 301 ELDLWSIDTETNEAYLIVEEKDKAYIDVTDNLTFLKD-KSFIWTSEKDGYNHIYHYTKKG 359

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQ 393
               ++++          ++P+ D I +           +  +K +G+ ++ L   +   
Sbjct: 360 KLINQVTKGNWEVTSYYGYNPKNDRIYYQSVENGSINRDVYSIKLNGTDKKRLTTATGTN 419

Query: 394 APTWSPS 400
              +S  
Sbjct: 420 NADFSAD 426



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/315 (14%), Positives = 102/315 (32%), Gaps = 58/315 (18%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA---TYDDE 234
           + ++ +  S   +++L          + LT      + EP FSPN + VAY        +
Sbjct: 105 VLLATNQESIFRRSTLANYYVYNTKTKELTAVASDKIQEPTFSPNGEMVAYGLNNNLYIK 164

Query: 235 DILRVYLMDTRIDRAPKRIGNF---------RSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D++         D    +I N             + A  +++N  +       +  +  +
Sbjct: 165 DLISQETTQLTFDGEKNKIINGITDWVYEEEFGFVRAFEWNANSSKIAFIRFDETNVPEF 224

Query: 286 SVDLQSNATER-----------------------LTNTLFINI------SASYSP----- 311
           S+D+  N   +                       L N     +      +  Y P     
Sbjct: 225 SMDVYGNNLYQTQTVFKYPKAGEKNAIVSLHIYTLENNKAEEVKVGKTYNDFYIPRIKWT 284

Query: 312 ---DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLIAFT 364
              D     + +  + +  L+ + +  ++   I ++K+ +Y D      +      I +T
Sbjct: 285 NAEDFLTAHYMNRHQNELDLWSIDTETNEAYLIVEEKDKAYIDVTDNLTFLKDKSFI-WT 343

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS---PSGRSLIFSRKKDGDTGSKLYSI 421
                   I    K G     + +  N +  ++    P    + +   ++G     +YSI
Sbjct: 344 SEKDGYNHIYHYTKKGKLINQVTK-GNWEVTSYYGYNPKNDRIYYQSVENGSINRDVYSI 402

Query: 422 DLNGRNETLINTPAY 436
            LNG ++  + T   
Sbjct: 403 KLNGTDKKRLTTATG 417



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 32/101 (31%), Gaps = 13/101 (12%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKF------AIGVMKKDGSQERLLVEDSNLQAP 395
           + D   ++ D  +S     +         F         V      +   +  D  +Q P
Sbjct: 86  TLDGIRNFSDYTFSDDETQVLLATNQESIFRRSTLANYYVYNTKTKELTAVASD-KIQEP 144

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           T+SP+G  + +         + LY  DL  +  T +     
Sbjct: 145 TFSPNGEMVAY------GLNNNLYIKDLISQETTQLTFDGE 179



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREG--KE 326
           K  + + +KD    IY    +     ++T   +   S   Y+P + +I ++S   G    
Sbjct: 338 KSFIWTSEKDGYNHIYHYTKKGKLINQVTKGNWEVTSYYGYNPKNDRIYYQSVENGSINR 397

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            +Y ++ NG+D+KR++     +  +  +S  
Sbjct: 398 DVYSIKLNGTDKKRLTTATGTN--NADFSAD 426


>gi|307944425|ref|ZP_07659765.1| WD repeat-containing protein [Roseibium sp. TrichSKD4]
 gi|307772174|gb|EFO31395.1| WD repeat-containing protein [Roseibium sp. TrichSKD4]
          Length = 325

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 79/197 (40%), Gaps = 18/197 (9%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
              P+ +   +  +LA   S + +  L++   D  ++  S D  S          +I++ 
Sbjct: 36  GSQPQIVKAHKGGLLAAEPSFD-QTGLVTSGDDGKINALSSDGSSQVLAERPR-KWIDLI 93

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           AS  P+ + I F S R      +V   +G++++      E +     ++P+G  +A  ++
Sbjct: 94  AS-GPNGA-IAFASGRT----AWVRLKDGTEKE---FSHERAVGGLAFAPKGLRLAVARY 144

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            G    +     +G Q   L         ++SP G+ L+ + +++   G +L     + +
Sbjct: 145 DGAT--LWWPNLEG-QPTELSWKGAHLGISFSPDGKYLVTAMQENALHGWRL----SDTQ 197

Query: 427 NETLINTPAYASDPQWV 443
           +  +   PA      W 
Sbjct: 198 DMRMTGYPAKVKSWSWS 214



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 22/184 (11%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +  V  +DG    +   S ++ +    F+P   ++A A YD        L    ++  P
Sbjct: 107 RTAWVRLKDGTEKEF---SHERAVGGLAFAPKGLRLAVARYDG-----ATLWWPNLEGQP 158

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             + +++   L   FS +GK  + ++Q++ A+  +   L      R+T       S S+S
Sbjct: 159 TEL-SWKGAHLGISFSPDGKYLVTAMQEN-ALHGWR--LSDTQDMRMTGYPAKVKSWSWS 214

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGS------DQKRISQDKEASYFDPVWSPQGDLIAFT 364
                +       G     +   +G          ++    +A        P+ D++A  
Sbjct: 215 QKGKHLA----TSGANAAILWPFSGKTGPMGQTPLQLGVRSDALVSAVACHPREDVVAIG 270

Query: 365 KFSG 368
              G
Sbjct: 271 YADG 274



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 45/139 (32%), Gaps = 14/139 (10%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            NG     +  +        V L+    +  ++   +    +++P   ++     R    
Sbjct: 97  PNGA-IAFASGRTAW-----VRLKDGTEKEFSHERAV-GGLAFAPKGLRLAVA--RYDGA 147

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            L+     G     +S   + ++    +SP G  +             +   D    R+ 
Sbjct: 148 TLWWPNLEG-QPTELSW--KGAHLGISFSPDGKYLVTAMQENALHGWRL--SDTQDMRMT 202

Query: 387 VEDSNLQAPTWSPSGRSLI 405
              + +++ +WS  G+ L 
Sbjct: 203 GYPAKVKSWSWSQKGKHLA 221


>gi|296204694|ref|XP_002749436.1| PREDICTED: seprase isoform 1 [Callithrix jacchus]
          Length = 760

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 78/240 (32%), Gaps = 48/240 (20%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRA 272
            F P +   Q+   Y     E+ + +Y ++T            +S+  +    S + +  
Sbjct: 56  TFFPNWISGQE---YLHKSAENNIVLYNIETGQSYTILSNRTMKSVNASSYGLSPDRQFI 112

Query: 273 LISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +        +       Y  DL +    R            +SP  S++ +        
Sbjct: 113 YLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQ----N 168

Query: 327 QLYVMQSNGSDQKRISQDKEAS---YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            +Y+ Q  G    +I+ +   +      P W  + +++A       K+A+          
Sbjct: 169 NIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLA------TKYALW--------- 213

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP---AYASDP 440
                        WSP+G+ L +    D D     YS   +G+    IN P   A A +P
Sbjct: 214 -------------WSPNGKFLAYVEFNDTDIPVIAYSYYGDGQYPRTINIPYPKAGAKNP 260


>gi|296817219|ref|XP_002848946.1| periodic tryptophan protein 2 [Arthroderma otae CBS 113480]
 gi|238839399|gb|EEQ29061.1| periodic tryptophan protein 2 [Arthroderma otae CBS 113480]
          Length = 914

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 93/239 (38%), Gaps = 18/239 (7%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L  M  D + +  L+ S+  I      + + + +A+ +     +L V+   +      K+
Sbjct: 277 LWEMP-DFSQLHLLSVSQSNIDCV-TINSSSEWLAFGSSKLGQLL-VWEWQSE-SYILKQ 332

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            G+  SM  A  +S +G++ + +   D  + ++ ++         T       +  ++  
Sbjct: 333 QGHLDSMN-ALVYSPDGRKIV-TAADDGKIKVWDIN-TGFCIVTFTEHKGGVTACEFTKR 389

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            + ++F +  +G  + + +     + K  +     S+      P G+++         F 
Sbjct: 390 GN-VLFTASLDGSVRAWDL-VRYRNFKTFTAPSRLSFSSLAVDPSGEVVCAGSLD--SFD 445

Query: 373 IGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           I +      Q   +L      + + ++S  G  ++ +     D   +++S+   GR++T
Sbjct: 446 IHIWSVQTGQLLDQLSGHQGPVSSLSFSGDGSHVVSASW---DRTVRIWSVF--GRSQT 499



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 65/197 (32%), Gaps = 13/197 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ +K+  A  D +    + + D             +  + A  F+  G   L +   
Sbjct: 344 YSPDGRKIVTAADDGK----IKVWDINTGFCIVTFTEHKGGVTACEFTKRGN-VLFTASL 398

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++    +  T    ++ S S + D S  V  +       +++        
Sbjct: 399 DGSVRAWDL-VRYRNFKTFTAPSRLSFS-SLAVDPSGEVVCAGSLDSFDIHIWSVQTGQL 456

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLLVEDSNLQAPT 396
                  +       +S  G  +    +      I  +  +   S+   L   S++    
Sbjct: 457 LDQLSGHQGPVSSLSFSGDGSHVVSASWD-RTVRIWSVFGRSQTSEPLQL--QSDVLCVA 513

Query: 397 WSPSGRSLIFSRKKDGD 413
           + P G+ +  +   DG 
Sbjct: 514 FRPDGKQIA-ASTLDGQ 529



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D   +++   +  +   ++   +  + +  FS +G   ++S   D  + I+SV  +S  +
Sbjct: 442 DSFDIHIWSVQTGQLLDQLSGHQGPVSSLSFSGDGSH-VVSASWDRTVRIWSVFGRSQTS 500

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           E L       +  ++ PD  QI   S  +G+   + +
Sbjct: 501 EPL-QLQSDVLCVAFRPDGKQIA-ASTLDGQLTFWSV 535


>gi|122879243|ref|YP_201770.6| peptidase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 779

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/332 (13%), Positives = 93/332 (28%), Gaps = 65/332 (19%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI-----------R 204
           H   D   Q+ +  +G    R   V          ++   +  DG N+           R
Sbjct: 150 HCAPDARPQAQSRPRGFGVVRDPLVPADTTPSRSPDARWEVLADGWNLMLRRVADGQVTR 209

Query: 205 YLTPSRDQILFE---PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---- 257
             +  R    F+     +SP+ Q++A          RV  ++       + + + +    
Sbjct: 210 LSSDGRADDYFDLESVAWSPDSQQLAVYRVRPGLARRVTRVEAAPAGGGQPVVHTQLYPK 269

Query: 258 -----------------------------SMILAP-RFSSNGKRALISVQKDEAMDIYSV 287
                                           L+P ++ S+G+       +     +  +
Sbjct: 270 PGDAVDVERPVLFALDGTRRDVETDMFDNPYSLSPLQWRSDGRSVAFEYVQRGFQRMRVI 329

Query: 288 --DLQSNATERLTNTLF---INISASYSPD----SSQIVFESDREGKEQLYVMQSNGSDQ 338
             D +S              +    S+  D      ++++ S+R+G   LY+        
Sbjct: 330 AVDARSGRAHVAVGEDARTFVYADRSFRHDVDGRGDEVLWISERDGWRHLYLFDGRNGQL 389

Query: 339 KRISQDKEASYFDPVWSPQG-DLIAFTKF------SGEKFAIGVMKKDGSQERLLVEDSN 391
           KR          D +        I FT              +  +  DG +   L     
Sbjct: 390 KRQLTRGPWVVRDVLRVDDMQRRIWFTASGMDAGKDPYYRQLYSVDFDGRRLVRLTHTDA 449

Query: 392 LQAPTWSPSGRSLI-FSRKKDGDTGSKLYSID 422
                 +  G+  +    + D     +L++ID
Sbjct: 450 DHDVAIADDGQHYVDVYSRPDLPPVMELHAID 481



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 66/242 (27%), Gaps = 50/242 (20%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL----APRFSS 267
                P  SP+ +    A     D   + L      +  +   + R+       +  +S 
Sbjct: 175 PADTTPSRSPDARWEVLA-----DGWNLMLRRVADGQVTRLSSDGRADDYFDLESVAWSP 229

Query: 268 NGKRALISVQKDEAMDIYS----VDLQSNATERLTN-----TLFINISASYSPDSSQIVF 318
           + ++  +   +       +               T         +++             
Sbjct: 230 DSQQLAVYRVRPGLARRVTRVEAAPAGGGQPVVHTQLYPKPGDAVDVE------------ 277

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                 +  L+ +     D +    D   S     W   G  +AF         + V+  
Sbjct: 278 ------RPVLFALDGTRRDVETDMFDNPYSLSPLQWRSDGRSVAFEYVQRGFQRMRVIAV 331

Query: 379 D---GSQERLLVEDSNLQAP---TWSPS----GRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           D   G     + ED+        ++       G  +++  ++DG     L+    +GRN 
Sbjct: 332 DARSGRAHVAVGEDARTFVYADRSFRHDVDGRGDEVLWISERDGWRHLYLF----DGRNG 387

Query: 429 TL 430
            L
Sbjct: 388 QL 389


>gi|84624630|ref|YP_452002.1| peptidase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|84368570|dbj|BAE69728.1| peptidase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 779

 Score = 48.5 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/347 (14%), Positives = 98/347 (28%), Gaps = 68/347 (19%)

Query: 144 FFSSPASWR---KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           F    A+WR      H   D   Q+ +  +G    R   V          ++   +  DG
Sbjct: 135 FALDDAAWRCTLTTYHCAPDARPQAQSRPRGFGVVRDPLVPADTTPSRSPDARWEVLADG 194

Query: 201 ANI-----------RYLTPSRDQILFE---PRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            N+           R  +  R    F+     +SP+ Q++A          RV  ++   
Sbjct: 195 WNLMLRRVADGQVTRLSSDGRADDYFDLESVAWSPDSQQLAVYRVRPGLARRVTRVEAAP 254

Query: 247 DRAPKRIGNFR---------------------------------SMILAP-RFSSNGKRA 272
               + + + +                                    L+P ++ S+G+  
Sbjct: 255 AGGGQPVVHTQLYPKPGDAVDVERPVLFALDGTRRDVETDMFDNPYSLSPLQWRSDGRSV 314

Query: 273 LISVQKDEAMDIYSV--DLQSNATERLTNTLF---INISASYSPD----SSQIVFESDRE 323
                +     +  +  D +S              +    S+  D      ++++ S+R+
Sbjct: 315 AFEYVQRGFQRMRVIAVDARSGRAHVAVGEDARTFVYADRSFRHDVDGRGDEVLWISERD 374

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKF------SGEKFAIGVM 376
           G   LY+        KR          D +        I FT              +  +
Sbjct: 375 GWRHLYLFDGRNGQLKRQLTRGPWVVRDVLRVDDMQRRIWFTASGMDAGKDPYYRQLYSV 434

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLI-FSRKKDGDTGSKLYSID 422
             DG +   L           +  G+  +    + D     +L++ID
Sbjct: 435 DFDGRRLVRLTHTDADHDVAIADDGQHYVDVYSRPDLPPVMELHAID 481



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 66/242 (27%), Gaps = 50/242 (20%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL----APRFSS 267
                P  SP+ +    A     D   + L      +  +   + R+       +  +S 
Sbjct: 175 PADTTPSRSPDARWEVLA-----DGWNLMLRRVADGQVTRLSSDGRADDYFDLESVAWSP 229

Query: 268 NGKRALISVQKDEAMDIYS----VDLQSNATERLTN-----TLFINISASYSPDSSQIVF 318
           + ++  +   +       +               T         +++             
Sbjct: 230 DSQQLAVYRVRPGLARRVTRVEAAPAGGGQPVVHTQLYPKPGDAVDVE------------ 277

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                 +  L+ +     D +    D   S     W   G  +AF         + V+  
Sbjct: 278 ------RPVLFALDGTRRDVETDMFDNPYSLSPLQWRSDGRSVAFEYVQRGFQRMRVIAV 331

Query: 379 D---GSQERLLVEDSNLQAP---TWSPS----GRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           D   G     + ED+        ++       G  +++  ++DG     L+    +GRN 
Sbjct: 332 DARSGRAHVAVGEDARTFVYADRSFRHDVDGRGDEVLWISERDGWRHLYLF----DGRNG 387

Query: 429 TL 430
            L
Sbjct: 388 QL 389


>gi|329114822|ref|ZP_08243579.1| Putative peptidase YuxL [Acetobacter pomorum DM001]
 gi|326695953|gb|EGE47637.1| Putative peptidase YuxL [Acetobacter pomorum DM001]
          Length = 671

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 74/198 (37%), Gaps = 31/198 (15%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +    +   +G  K +L  +   G     +  +       P FSP+ + V +  +D  ++
Sbjct: 162 LAVREDHQKAGEAKTALVALHVQGNKAGVVLKAGADFYAAPAFSPDGKWVTWVEWDHPNM 221

Query: 237 L----RVYLMDTRIDRAPKRIGNFRSMILA----------PRFSSNGKRALISVQKDEAM 282
                R+ L   + + + +  G   + +LA          PR++S+G+  ++S  +  + 
Sbjct: 222 PWDATRLCLARVQRNASGEICGIADARVLAGEQTSESLIEPRWASDGRLLVLS-DRSGSW 280

Query: 283 DIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            I++V  Q N    L+            ++       VF     G+    ++++ G    
Sbjct: 281 TIWNVHWQENNPT-LSRYPAPEGEIGQPAW-------VF-----GQSSYQLLKNEGCLIL 327

Query: 340 RISQDKEASYFDPVWSPQ 357
            ++Q +   +  P  +  
Sbjct: 328 AVTQGQATCWIKPDRASD 345



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 50/139 (35%), Gaps = 23/139 (16%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-------IGVMK 377
           K  L  +   G+    + +     Y  P +SP G  + + ++             +  ++
Sbjct: 175 KTALVALHVQGNKAGVVLKAGADFYAAPAFSPDGKWVTWVEWDHPNMPWDATRLCLARVQ 234

Query: 378 KDGSQE-------RLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           ++ S E       R+L  +   ++   P W+  GR L+    + G     ++++     N
Sbjct: 235 RNASGEICGIADARVLAGEQTSESLIEPRWASDGRLLV-LSDRSGSWT--IWNVHWQENN 291

Query: 428 ETLINTP---AYASDPQWV 443
            TL   P        P WV
Sbjct: 292 PTLSRYPAPEGEIGQPAWV 310


>gi|291410967|ref|XP_002721764.1| PREDICTED: WD repeat domain 20 isoform 1 [Oryctolagus cuniculus]
          Length = 508

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 62/227 (27%), Gaps = 32/227 (14%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN-------SLCV 195
           +F +    ++ + H+      +     +G    R+ FV+ +  SG            L  
Sbjct: 16  QFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYF 75

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
               G   R +  SR   +   ++ P  + +    +   ++    +  T     P     
Sbjct: 76  YIYKGVRKRLIDKSRVTCV---KWVPGSESLFLVAHSSGNMYLYNVEHTCGTTGPHYQLL 132

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +                +   K ++     +        + T         ++SPD   
Sbjct: 133 KQGESF-----------AVHTCKSKSTRNPLL--------KWTVGEGALNEFAFSPDGKF 173

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +   S       L V   +  +     +          WSP G  I 
Sbjct: 174 LACVSQ---DGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIV 217



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 64/212 (30%), Gaps = 44/212 (20%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRF------SSNGKRALISVQKDEA 281
             +   + L   L  +   R  +   N +    +   F      S NG R   +V ++  
Sbjct: 15  TQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELY 74

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ----SNGSD 337
             IY         +RL +         + P S  +   +   G   LY ++    + G  
Sbjct: 75  FYIYK-----GVRKRLID-KSRVTCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTGPH 128

Query: 338 QKRISQD----------------------KEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            + + Q                        E +  +  +SP G  +A     G    + V
Sbjct: 129 YQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDG---FLRV 185

Query: 376 MKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
              D  +    ++     L    WSP G+ ++
Sbjct: 186 FNFDSVELHGTMKSYFGGLLCVCWSPDGKYIV 217


>gi|148655470|ref|YP_001275675.1| WD-40 repeat-containing protein [Roseiflexus sp. RS-1]
 gi|148567580|gb|ABQ89725.1| WD-40 repeat protein [Roseiflexus sp. RS-1]
          Length = 291

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 18/122 (14%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                    + SPD   +V  S      +++     G +  R++       +D  +SP G
Sbjct: 145 THDDNVTDVALSPDGRLVVSGS------RVWET-VTGREVARLTHAP----YDAAFSPDG 193

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
             +    +        V + D  +E   +  D  + A  +SP G+ ++      GD  ++
Sbjct: 194 RYVVSGSWDTTA---RVWEADTGREVARMTHDGEVLAVAFSPDGQYVV---SGSGDGTAR 247

Query: 418 LY 419
           ++
Sbjct: 248 VW 249



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 16/125 (12%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            D  + +   SP+ + V   +          + +T   R   R+ +         FS +G
Sbjct: 146 HDDNVTDVALSPDGRLVVSGSR---------VWETVTGREVARLTHAP---YDAAFSPDG 193

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +  ++S   D    ++  D       R+T      ++ ++SPD   +V  S  +G  +++
Sbjct: 194 RY-VVSGSWDTTARVWEAD-TGREVARMT-HDGEVLAVAFSPDGQYVVSGSG-DGTARVW 249

Query: 330 VMQSN 334
             +  
Sbjct: 250 WWRPE 254


>gi|255037404|ref|YP_003088025.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Dyadobacter fermentans DSM 18053]
 gi|254950160|gb|ACT94860.1| peptidase S9B dipeptidylpeptidase IV domain protein [Dyadobacter
           fermentans DSM 18053]
          Length = 726

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 60/187 (32%), Gaps = 35/187 (18%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTR-----IDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           + P+     +    +  I+ + L   +             G     I +   S  G + L
Sbjct: 27  WLPDGSG--FRDASESQIVEITLPGNQEKVIVSADQLTPQGGKPLTIRSYSISKAGDKVL 84

Query: 274 I------SVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGK 325
           +        + D   D +  D+ +   ++L   L  +  + A +SPD  ++ + S    K
Sbjct: 85  VYTNSKRVWRYDTRGDYWVYDIAAKTLKQLGKGLPESSLMFAKFSPDGKKVAYVS----K 140

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDP----------------VWSPQGDLIAFTKFSGE 369
             +YV     S  K+++ D      +                  WS     IA+ +    
Sbjct: 141 HNVYVEDLAASTVKQVTTDGTDRVINGTFDWVYEEEFDCRDGFRWSDDSKSIAYWQLDAR 200

Query: 370 KFAIGVM 376
           K    +M
Sbjct: 201 KIRNFLM 207



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 35/112 (31%), Gaps = 25/112 (22%)

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S+ V+  D  G    +V        K++ +   E+S     +SP G  +A+      K  
Sbjct: 89  SKRVWRYDTRG--DYWVYDIAAKTLKQLGKGLPESSLMFAKFSPDGKKVAYVS----KHN 142

Query: 373 IGVMKKDGSQERLLVEDSNL------------------QAPTWSPSGRSLIF 406
           + V     S  + +  D                         WS   +S+ +
Sbjct: 143 VYVEDLAASTVKQVTTDGTDRVINGTFDWVYEEEFDCRDGFRWSDDSKSIAY 194



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 40/227 (17%), Positives = 75/227 (33%), Gaps = 21/227 (9%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-T 207
           A W+  A  I + +  + T     FN  + +    V        + V+D   A  +++  
Sbjct: 193 AYWQLDARKIRNFLMINTTDSIYSFNVPVEYPK--VGETPSPYKIGVVDVASAQTKWMNI 250

Query: 208 PSRDQILFEPR--FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS---MILA 262
           P   Q  + PR  +S    ++     + +            D + K   + +    + + 
Sbjct: 251 PGDPQNTYVPRMEWSGMPNELVIQQLNRKQNESTLFYINTTDGSAKPFYSEKDEAWIDIK 310

Query: 263 PRFSSN---------GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPD 312
            R+ ++         GK  L   +KD     Y V         +T   F  IS       
Sbjct: 311 SRWDNDPVGWDWINGGKEFLWVSEKDGWRHTYRVSRDGKKETLITVGNFDLISPVRIDEK 370

Query: 313 SSQIVFESDREGKEQ--LYVMQSNG-SDQKRISQDKEASYFDPVWSP 356
           ++   F +  +   Q  LY    +G     RI+   +A   +   SP
Sbjct: 371 NNAYYFMASPDNATQSYLYKTTLDGKGTLVRITPADQAGSHNYDISP 417



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 45/148 (30%), Gaps = 29/148 (19%)

Query: 309 YSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQ--------DKEASYFDPVWSPQGD 359
           + PD S       R+  E Q+  +   G+ +K I           K  +      S  GD
Sbjct: 27  WLPDGSGF-----RDASESQIVEITLPGNQEKVIVSADQLTPQGGKPLTIRSYSISKAGD 81

Query: 360 LIAFTKFSGEKFAI------GVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKK 410
            +     S   +         V        + L +    S+L    +SP G+ + +  K 
Sbjct: 82  KVLVYTNSKRVWRYDTRGDYWVYDIAAKTLKQLGKGLPESSLMFAKFSPDGKKVAYVSKH 141

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +      +Y  DL       + T     
Sbjct: 142 N------VYVEDLAASTVKQVTTDGTDR 163


>gi|193063361|ref|ZP_03044451.1| peptidase, S54 (rhomboid) family [Escherichia coli E22]
 gi|192930945|gb|EDV83549.1| peptidase, S54 (rhomboid) family [Escherichia coli E22]
          Length = 625

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 86/259 (33%), Gaps = 26/259 (10%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRI 246
           L +    G  I+ +T            S +  K          +  +      ++ D  +
Sbjct: 377 LVINVATGEIIQSITTGAHPDSLI--LSRDGTKAWVMNRTSNSVSAIDLVAYQHVADIPL 434

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI- 305
           ++      + +        S + +  L+    +   +I  ++  ++  E           
Sbjct: 435 EKYDGTGTSGKPGAWVMALSPDERTLLV--PGEGRGNIVRINTITHQKEDFPAGDARGTI 492

Query: 306 -SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +  + P++ +++F  D +G  ++ +     S   +      + Y     SP G  +A  
Sbjct: 493 SAMRFRPENGEVIFA-DSQGISRISIGDQQTSIMTQ--WCSRSVYSVEGISPDGQYLALV 549

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +  + + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D  
Sbjct: 550 SYGLQGYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT 602

Query: 425 GRNETLINTPAYASDPQWV 443
                 ++  A    PQ+ 
Sbjct: 603 ----RSLDPQAIIRHPQYG 617


>gi|167569323|ref|ZP_02362197.1| hypothetical protein BoklC_05722 [Burkholderia oklahomensis C6786]
          Length = 391

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/324 (15%), Positives = 93/324 (28%), Gaps = 64/324 (19%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           L V     SG     +   D D   +  ++ ++ +       S + + V        D  
Sbjct: 31  LLVGTYTGSGSEGIYVYRFDTDSGRMTPVSSAKTENPSYLVASRDGRHVYTVNELPGDAG 90

Query: 238 RVYLMD----------TRIDRAPKRIGNFRSMILAPRFSSNGKRAL---ISVQKDEAMDI 284
              +            T       R+ +  +       S +GK  +    SV  D     
Sbjct: 91  PASVRGGVSAFDFDAKTGALAFVNRVSSEGNDPCYLSLSPDGKYLVAANYSVASDPGGSF 150

Query: 285 YSVDLQ---------------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
               ++                    +         SA +SPD   + F  D  G +++Y
Sbjct: 151 SVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHSAVFSPDGKYL-FVQD-LGADKIY 208

Query: 330 VMQSNGSDQKRISQDKEASYF---------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +      + +    +A Y            V+   G     T        +     DG
Sbjct: 209 SYRYTPDGSRGLVGPTDARYTLVKPGSGPRHLVFGANGRFAYVTDELNASVDVYRYD-DG 267

Query: 381 SQERLLVEDSNLQAPTW-----------SPSGRSLIFSRKKDGDTGSKLYSIDLN----- 424
               +  E  ++ AP +           SP GR L ++  +       +Y++        
Sbjct: 268 RLAHV--ETVSMTAPGFAGKVGGGALHLSPDGRFL-YASNRGDANDIVIYAVSAADGKLK 324

Query: 425 --GRNETLINTPA-YASDPQ--WV 443
             GR  +L  TP  +A DP   W+
Sbjct: 325 LVGRQSSLGRTPREFAIDPSGKWL 348


>gi|159028621|emb|CAO90624.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 364

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 68/177 (38%), Gaps = 6/177 (3%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +        R+        +   +FS N Q +A    +++  + ++ +  +
Sbjct: 173 SGSEDKTVKIWSVKTGETRFTLQGHGDKVLTVKFSQNGQLLASGGGENDKTVIIWNLGEK 232

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                K   ++   IL+  F SN K    S  KD+ + I+ +  +    + L+       
Sbjct: 233 SSITLKGHSDWFGGILSVDFGSNNKFLA-SGSKDKTIKIWDI-KRGTEVKTLSEHSDHIN 290

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           S + SP++  +       G ++   +    + +  IS       +   +SP G+ IA
Sbjct: 291 SVTVSPNNQLLA----SGGDDKSLKLWDLKAGKAIISIPHPQKIYSVCFSPDGNYIA 343



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/251 (12%), Positives = 73/251 (29%), Gaps = 18/251 (7%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           DDI+     ++    + + F       VSG    +L +   +   +          +   
Sbjct: 106 DDIFPRHRHKRI---NSVAFSPCQGFLVSGGDDQTLRIWSLETKKLISTLTGHQDKVTAV 162

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              P+ + +A  + D      V +   +       +      +L  +FS NG+       
Sbjct: 163 AVHPDGEIIASGSEDK----TVKIWSVKTGETRFTLQGHGDKVLTVKFSQNGQLLA---S 215

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPD-SSQIVFESDREGKEQLYVMQSNG 335
                D   +         +T     +      S D  S   F +     + + +     
Sbjct: 216 GGGENDKTVIIWNLGEKSSITLKGHSDWFGGILSVDFGSNNKFLASGSKDKTIKIWDIKR 275

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQA 394
             + +   +          SP   L+A     G+  ++ +      +  + +     + +
Sbjct: 276 GTEVKTLSEHSDHINSVTVSPNNQLLA---SGGDDKSLKLWDLKAGKAIISIPHPQKIYS 332

Query: 395 PTWSPSGRSLI 405
             +SP G  + 
Sbjct: 333 VCFSPDGNYIA 343


>gi|239908887|ref|YP_002955629.1| hypothetical protein DMR_42520 [Desulfovibrio magneticus RS-1]
 gi|239798754|dbj|BAH77743.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 422

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 50/166 (30%), Gaps = 36/166 (21%)

Query: 258 SMILAPRFSSNGKRAL---------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             +    FS +G +            +V  D      S  + +            +++  
Sbjct: 270 GQLWQQAFSPDGSKLAAIACVRFGEFTVAVDGTPWGMSFPVVT------------DLTP- 316

Query: 309 YSPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            SP  ++     SD      +     +G     +   +    + PVWS  G  +A     
Sbjct: 317 -SPAGARFAALASDHNTNFAVLC---DGK----VWDGRYDMAYAPVWSADGAHLALAVEK 368

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             +  I +   DG       +     AP +SP G+ ++      G 
Sbjct: 369 AGRQTIVL---DGKAYSQSFD--KCYAPAFSPDGKLVLIRALAGGK 409



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 49/139 (35%), Gaps = 18/139 (12%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  S +G+R  +    +      +V+         T          +SPD    V     
Sbjct: 33  PHVSPDGERVAMVAALEGPAFTMAVN---GEAWETTFDKAWY--PRFSPDGRLTVLV-QA 86

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G   L V  +         +++    ++ ++S  GD+IA       ++   +   DG+ 
Sbjct: 87  DGDWTLAVDDAP-------WEEQYGYVWNTMFSASGDIIAACIQQDGEYGFSI---DGTP 136

Query: 383 ERLLVEDSNLQAPTWSPSG 401
              L E  N   P ++ +G
Sbjct: 137 WETLYE--NANQPVFAKAG 153



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 57/166 (34%), Gaps = 25/166 (15%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS--- 266
           R   L++  FSP+  K+A           V +  T    +   + +        RF+   
Sbjct: 268 RFGQLWQQAFSPDGSKLAAIACVRFGEFTVAVDGTPWGMSFPVVTDLTPSPAGARFAALA 327

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           S+      +V  D  +     D+                +  +S D + +    ++ G++
Sbjct: 328 SDHNTN-FAVLCDGKVWDGRYDMA--------------YAPVWSADGAHLALAVEKAGRQ 372

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +     +G    + S DK    + P +SP G L+     +G K  
Sbjct: 373 TIV---LDGKAYSQ-SFDK---CYAPAFSPDGKLVLIRALAGGKCH 411



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 12/113 (10%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               SPD  ++   +  EG    + M  NG   +  + DK    + P +SP G L     
Sbjct: 32  EPHVSPDGERVAMVAALEGPA--FTMAVNGEAWE-TTFDK---AWYPRFSPDGRLTVLV- 84

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +   + + V      +E+       +    +S SG  +    ++DG+ G  +
Sbjct: 85  QADGDWTLAVDDAP-WEEQY----GYVWNTMFSASGDIIAACIQQDGEYGFSI 132



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 22/82 (26%), Gaps = 8/82 (9%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
             R  + + P +S +   +A A         V           K          AP FS 
Sbjct: 344 DGRYDMAYAPVWSADGAHLALAVEKAGRQTIVLDGKAYSQSFDK--------CYAPAFSP 395

Query: 268 NGKRALISVQKDEAMDIYSVDL 289
           +GK  LI              +
Sbjct: 396 DGKLVLIRALAGGKCHRIVAPV 417


>gi|170032642|ref|XP_001844189.1| guanine nucleotide-binding protein subunit beta 5 [Culex
           quinquefasciatus]
 gi|167873019|gb|EDS36402.1| guanine nucleotide-binding protein subunit beta 5 [Culex
           quinquefasciatus]
          Length = 352

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/228 (12%), Positives = 74/228 (32%), Gaps = 19/228 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +       +    +SP+++ +  ++ D +    + + D   +     +    + ++ 
Sbjct: 56  PRRVLKGHQAKVLCSDWSPDKRHIVSSSQDGK----LIIWDAFTNYKEHAVTMPTTWVMG 111

Query: 263 PRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQIVF 318
             ++ +G         D  + +Y +    D+ S      T+T +  +S    P+S Q + 
Sbjct: 112 CSYAPSGNLVA-CGGLDNKVTVYPITMEEDISSRKKTVGTHTSY--MSCCIFPNSDQQIL 168

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                G     +         +              +P      F   S +K A  +   
Sbjct: 169 TG--SGDSTCALWDVESGQLLQSFHGHTGDVMSIDLAPNETGNTFVSGSCDKMA-FIWDM 225

Query: 379 DGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                    E   S++ +  + PSG ++        D+  +L+ +  +
Sbjct: 226 RSGHVVQSFEGHLSDVNSVKFHPSGDAI---STGSDDSTCRLFDMRAD 270


>gi|156548996|ref|XP_001607281.1| PREDICTED: similar to MGC130867 protein [Nasonia vitripennis]
          Length = 603

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/106 (15%), Positives = 44/106 (41%), Gaps = 5/106 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + +G    ++ + ++D  N+  +       +F   FSP+ + +A       D   + 
Sbjct: 454 TQYLATGSSDKTVRLWNKDDGNLLRVYVGAQSTIFSVAFSPDGKYLA----SAGDDKSIT 509

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           + D   +     +   +  ++   +SS+G+    S   D  + ++S
Sbjct: 510 IWDLATNAVLTELKGHQDSVMNLDWSSDGEFIA-SSSLDGIVHLWS 554



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 55/143 (38%), Gaps = 16/143 (11%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQS 333
           +   D    ++S+D       R+    F++++   + P++  +   S     + + +   
Sbjct: 417 TGSHDRTAKLWSLDRTF--PLRIYAGHFLDVNCVRFHPNTQYLATGSS---DKTVRLWNK 471

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +  +  R+    +++ F   +SP G  +A    +G+  +I +     +   +L E    Q
Sbjct: 472 DDGNLLRVYVGAQSTIFSVAFSPDGKYLA---SAGDDKSITIWDLATNA--VLTELKGHQ 526

Query: 394 APT----WSPSGRSLIFSRKKDG 412
                  WS  G  +  S   DG
Sbjct: 527 DSVMNLDWSSDGEFIA-SSSLDG 548



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/181 (13%), Positives = 52/181 (28%), Gaps = 11/181 (6%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +  +                  L         +        +   RF  N +    +
Sbjct: 401 YPIWCMDTSVFNLYIATGSHDRTAKLWSLDRTFPLRIYAGHFLDVNCVRFHPNTQYLA-T 459

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D+ + +++ D   N             S ++SPD   +    D    + + +     
Sbjct: 460 GSSDKTVRLWNKD-DGNLLRVYVGAQSTIFSVAFSPDGKYLASAGD---DKSITIWDLAT 515

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +      +  + S  +  WS  G+ IA +   G      ++    +QE +   +     P
Sbjct: 516 NAVLTELKGHQDSVMNLDWSSDGEFIASSSLDG------IVHLWSTQECIKTGNVGSSNP 569

Query: 396 T 396
           T
Sbjct: 570 T 570


>gi|115717901|ref|XP_780317.2| PREDICTED: similar to fizzy-related protein, partial
           [Strongylocentrotus purpuratus]
          Length = 496

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/254 (11%), Positives = 79/254 (31%), Gaps = 14/254 (5%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVS----GIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +  +     +    GD ++          +    G  K  + V D       +       
Sbjct: 228 SACNSQVTRLCDLSGDGDTVTSVSWNERGNLVAVGTHKGLVQVWDYAAQKKLHALDGHAA 287

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +    ++ +                +   D R+    +R+G  R  +   ++S + +  
Sbjct: 288 RVGALAWNADSLC------SGSRDRMILQRDIRVPGVIRRLGGHRQEVCGLKWSPDHQHL 341

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             S   D  + +++    ++  ++ T       + ++SP    ++  S     ++     
Sbjct: 342 A-SGGNDNRLFVWNHS-STSPVQQYTEHSAAVKAIAWSPHQHGLL-ASGGGTADRCIRFW 398

Query: 333 SNGSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           +  + Q     D  +   +  WS    +L++   +S  +  +          +L      
Sbjct: 399 NTLTSQPLNYVDTVSQVCNLAWSKHDNELVSTHGYSQNQILVWKYPSLVQVAKLTGHTYR 458

Query: 392 LQAPTWSPSGRSLI 405
           +     SP G +++
Sbjct: 459 VLYLAVSPDGEAIV 472


>gi|24375477|ref|NP_719520.1| dipeptidyl peptidase IV [Shewanella oneidensis MR-1]
 gi|24350330|gb|AAN56964.1|AE015829_8 dipeptidyl peptidase IV [Shewanella oneidensis MR-1]
          Length = 763

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 205 YLTPSRDQILFEPR--FSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRS--- 258
            L+  +++ ++ PR  + P+ + +++     D+  L + L+       PK +   RS   
Sbjct: 297 TLSDDKNKDIYLPRVDWLPDSKHLSFQWQSRDQQKLDLQLVALDSLTKPKTLVKERSDAW 356

Query: 259 --MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             +     F       + + ++D    +Y  DL+     +LT   +      +  +++  
Sbjct: 357 VNLNNDLHFLKQQSAFIWASERDGFNHLYLFDLKGKLKTQLTKGNWAVDELEFIDETAGW 416

Query: 317 VFESDREGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           V+ + R+       LY +   G + +R+S   EA   DPV++  
Sbjct: 417 VYFTGRKDTPIEKHLYRVPLAGGNIERVS--SEAGMHDPVFADN 458



 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 23/195 (11%), Positives = 58/195 (29%), Gaps = 57/195 (29%)

Query: 261 LAPR---FSSNGKRALISVQKDEA---MDIYSVDLQSNA--------------------- 293
            +PR    S +G++      + +     D++ +D+++                       
Sbjct: 61  TSPRGLKLSPDGQKVTYLAGRKDNQNFYDLWQMDVKTGKSSLLLNADKLASNELSDEEKA 120

Query: 294 --TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               +      I +   ++ DS  ++  +       LY      +    +    E    D
Sbjct: 121 RRERQRIYGEGI-MEYFWADDSKALLIPA----AGNLYYFSLADNSVSLL-PIGEGFATD 174

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQ 393
              SP+G+ ++F +       + V+     +   +  D                    + 
Sbjct: 175 ARLSPKGNFVSFVRDQ----NLYVLNLATKKLEAMTTDGGGVIKNAMAEFVAQEEMDRMT 230

Query: 394 APTWSPSGRSLIFSR 408
              W+P   ++ F+R
Sbjct: 231 GYWWAPDESAIAFTR 245



 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 45/330 (13%), Positives = 100/330 (30%), Gaps = 78/330 (23%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV----------MDRDGANI--- 203
           +++D+    +   +G      L    + VS +   +L V          M  DG  +   
Sbjct: 156 SLADNSVSLLPIGEGFATDARLSPKGNFVSFVRDQNLYVLNLATKKLEAMTTDGGGVIKN 215

Query: 204 ---RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA----------- 249
               ++       +    ++P++  +A+   D+  +  V   +   D             
Sbjct: 216 AMAEFVAQEEMDRMTGYWWAPDESAIAFTRIDESAVELVTRNEIYADGIKLTEQRYPAAG 275

Query: 250 ----PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 ++G       A  +        +++  D+  DIY   +                
Sbjct: 276 KNNVEIQLGVVTLKNKAIDW--------VTLSDDKNKDIYLPRVD--------------- 312

Query: 306 SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--- 361
              + PDS  + F+   R+ ++    + +  S  K  +  KE S      +     +   
Sbjct: 313 ---WLPDSKHLSFQWQSRDQQKLDLQLVALDSLTKPKTLVKERSDAWVNLNNDLHFLKQQ 369

Query: 362 ---AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG--------RSLIFSRKK 410
               +         + +    G  +  L + +      W+             + F+ +K
Sbjct: 370 SAFIWASERDGFNHLYLFDLKGKLKTQLTKGN------WAVDELEFIDETAGWVYFTGRK 423

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           D      LY + L G N   +++ A   DP
Sbjct: 424 DTPIEKHLYRVPLAGGNIERVSSEAGMHDP 453



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 85/303 (28%), Gaps = 93/303 (30%)

Query: 220 SPNQQKVAYA--TYDDEDILRVYLMDTRID-----------------------RAPKRIG 254
           SP+ QKV Y     D+++   ++ MD +                         R  +RI 
Sbjct: 69  SPDGQKVTYLAGRKDNQNFYDLWQMDVKTGKSSLLLNADKLASNELSDEEKARRERQRIY 128

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               M     ++ + K  LI      A ++Y   L  N+   L         A  SP  +
Sbjct: 129 GEGIMEYF--WADDSKALLI----PAAGNLYYFSLADNSVSLLPIGEGFATDARLSPKGN 182

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEA----------------SYFDPVWSPQG 358
            + F  D    + LYV+       + ++ D                         W+P  
Sbjct: 183 FVSFVRD----QNLYVLNLATKKLEAMTTDGGGVIKNAMAEFVAQEEMDRMTGYWWAPDE 238

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS---------------------------- 390
             IAFT+       +    +  +    L E                              
Sbjct: 239 SAIAFTRIDESAVELVTRNEIYADGIKLTEQRYPAAGKNNVEIQLGVVTLKNKAIDWVTL 298

Query: 391 ------NLQAPT--WSPSGRSLIF--SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                 ++  P   W P  + L F    +       +L ++D   + +TL+         
Sbjct: 299 SDDKNKDIYLPRVDWLPDSKHLSFQWQSRDQQKLDLQLVALDSLTKPKTLVK----ERSD 354

Query: 441 QWV 443
            WV
Sbjct: 355 AWV 357


>gi|77362150|ref|YP_341724.1| putative enzyme [Pseudoalteromonas haloplanktis TAC125]
 gi|76877061|emb|CAI89278.1| putative enzyme [Pseudoalteromonas haloplanktis TAC125]
          Length = 682

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 10/88 (11%)

Query: 348 SYFDPVWSPQGDLIAFTKF---------SGEKF-AIGVMKKDGSQERLLVEDSNLQAPTW 397
           S      SP GD +AFT+          +G  +  + V+   G +   +    ++ +  W
Sbjct: 33  SVIQTSISPDGDNVAFTRSVPRELYVDENGTNYRELYVVNDKGVERPFITGSVSISSIQW 92

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           S + +++ F  K   D  + LY I ++G
Sbjct: 93  SNNSKTIYFLAKLKDDKFTALYQIPVDG 120



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 61/175 (34%), Gaps = 40/175 (22%)

Query: 308 SYSPDSSQIVFES--------DREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           S SPD   + F          D  G    +LYV+   G ++  I+     S     WS  
Sbjct: 38  SISPDGDNVAFTRSVPRELYVDENGTNYRELYVVNDKGVERPFIT--GSVSISSIQWSNN 95

Query: 358 GDLIAF-TKFSGEKF-AIGVMKKDGSQ-ERLLV-EDSNLQAPTWSPSGRSLIFSR----- 408
              I F  K   +KF A+  +  DG Q  ++L  +D+++ +   SP  + L         
Sbjct: 96  SKTIYFLAKLKDDKFTALYQIPVDGGQAHKVLSLKDTSISSYALSPDNKHLAILAMPAAD 155

Query: 409 ---------------KKDGDTGSKLYSIDLNGRNETLINT----PAYASDPQWVG 444
                           + G    +L+  DL   ++ L  T      Y SD  W  
Sbjct: 156 KSDKELKKLGFMAEVYEQGLKNKQLFIADLKQTDKPLSPTALNVANYVSDVNWAA 210



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 13/112 (11%)

Query: 264 RFSSNGKRALISVQKDEAM----------DIYSVDLQSNATERLTNTLFINISASYSPDS 313
             S +G     +      +          ++Y V+ +      +T ++ I  S  +S +S
Sbjct: 38  SISPDGDNVAFTRSVPRELYVDENGTNYRELYVVNDKGVERPFITGSVSI-SSIQWSNNS 96

Query: 314 SQIVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             I F +    +    LY +  +G    ++   K+ S      SP    +A 
Sbjct: 97  KTIYFLAKLKDDKFTALYQIPVDGGQAHKVLSLKDTSISSYALSPDNKHLAI 148


>gi|109900068|ref|YP_663323.1| transcriptional regulator, CadC [Pseudoalteromonas atlantica T6c]
 gi|109702349|gb|ABG42269.1| lysine decarboxylase transcriptional regulator, CadC
           [Pseudoalteromonas atlantica T6c]
          Length = 756

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 33/74 (44%), Gaps = 2/74 (2%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINI 305
              + + +  +  LA  +S +GK  +     +      +++ ++++    +LT  L    
Sbjct: 182 DDIRLLTSTDNRELASAYSPDGKFIVFQRFPEVMCTSHLWAKNIETQQEFQLTRDLGSYG 241

Query: 306 SASYSPDSSQIVFE 319
           + ++S D + ++F 
Sbjct: 242 NLAFSEDGTSLIFV 255



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 72/190 (37%), Gaps = 28/190 (14%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGA-----NIRYLTPSRDQILFEPRFSPNQQKV 226
           DF+ +   ++ + V    K  +  +  +GA      I +           P FSP + ++
Sbjct: 346 DFSKKYNVIALTSVHESGKLYIEKLTPEGALLSSNPINFRGEIPQYGTIYPNFSPIEGRL 405

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            ++T      L     D  I      + +       P F  NGK+ L +++     DI S
Sbjct: 406 IFST---GKQLFTVSFDGDISAISMPLTDAIG---TPLFHPNGKKML-AIKGHYDSDIVS 458

Query: 287 VDLQSNATERL--TNTLFINIS-------------ASYSPDSSQIVFESDREGKEQLYVM 331
           V L   +  R+  T+TL   +              A Y P+ + I + S+ +G  Q++  
Sbjct: 459 VPLSQFSYSRMQQTDTLGATVEYETVVRSMQEEDRAKYQPNGNLIAYYSEGDGTSQVWTS 518

Query: 332 Q-SNGSDQKR 340
             + GS   R
Sbjct: 519 NLAQGSTASR 528



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 76/243 (31%), Gaps = 29/243 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L  S D       +SP+ + + +  + +              +   ++           
Sbjct: 185 RLLTSTDNRELASAYSPDGKFIVFQRFPEVMCTSHLWAKNIETQQEFQLTRDLGSYGNLA 244

Query: 265 FSSNGKRALISVQKD-------------EAMDIYSVDLQSNATERLTNTLFINI-SASYS 310
           FS +G   +   Q +             + +D     L       L      +I S ++ 
Sbjct: 245 FSEDGTSLIFVKQNNCSAPALQKKCFLLQQLDFEQALLSPQTPTTLMECKHTDIKSPTWL 304

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGE 369
             ++ I      +G+ +L            + +    S     +S + ++IA T      
Sbjct: 305 -SANDIALLQKEQGRWKLIRYSVKADKSALLYEVNNGSVVSYDFSKKYNVIALTSVHESG 363

Query: 370 KFAIGVMKKDGS-------QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           K  I  +  +G+         R  +       P +SP    LIFS      TG +L+++ 
Sbjct: 364 KLYIEKLTPEGALLSSNPINFRGEIPQYGTIYPNFSPIEGRLIFS------TGKQLFTVS 417

Query: 423 LNG 425
            +G
Sbjct: 418 FDG 420



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 67/217 (30%), Gaps = 38/217 (17%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G  K     +  D + + Y   +   + ++  FS     +A  +  +   L +  +    
Sbjct: 317 GRWKLIRYSVKADKSALLYEVNNGSVVSYD--FSKKYNVIALTSVHESGKLYIEKLTPEG 374

Query: 247 DRAPKRIGNFRS-----MILAPRFSS-NGKRAL------ISVQKDEAMDIYSVDLQSNAT 294
                   NFR        + P FS   G+          +V  D  +   S+       
Sbjct: 375 ALLSSNPINFRGEIPQYGTIYPNFSPIEGRLIFSTGKQLFTVSFDGDISAISMP------ 428

Query: 295 ERLTNTLFINISASYSPDSSQIV-----FESDREGKE-------QLYVMQSNGSDQKRIS 342
             LT+ +       + P+  +++     ++SD            ++    + G+  +  +
Sbjct: 429 --LTDAIGT---PLFHPNGKKMLAIKGHYDSDIVSVPLSQFSYSRMQQTDTLGATVEYET 483

Query: 343 QDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKK 378
             +     D   + P G+LIA+         +     
Sbjct: 484 VVRSMQEEDRAKYQPNGNLIAYYSEGDGTSQVWTSNL 520


>gi|326512098|dbj|BAJ96030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 360

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 19/169 (11%)

Query: 292 NATERLTNTLFINISASYSPD---SSQIVFESDREGKE-QLYVMQSNG--SDQKRISQDK 345
             T RLT       S +++P+    +  V  S    K  +++    +G       +    
Sbjct: 19  RETHRLTGHADRAWSLAWNPNPGAGAGPVLASCGGDKTVRIWKRAPDGVWDCSDVLDGVH 78

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ----ERLLVEDSNLQAPTWSPSG 401
           E +     WSP G L+A   F G      + +  G        L   D+ +++ +WS SG
Sbjct: 79  ERTVRSCAWSPDGKLLATASFDGTT---AIWEYSGGDFECVATLEGHDNEVKSVSWSQSG 135

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVGFMD 447
             L    +   D    ++ +     +E +     +  D    QW   ++
Sbjct: 136 SLLATCSR---DKAVWIWEVQPGNEHECVAVLQGHTQDVKMVQWHPILN 181



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 39/295 (13%), Positives = 92/295 (31%), Gaps = 35/295 (11%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE-KGDFNSRILFVSESVVSGIIKN 191
           +   + + G        + R   H  +D  +        G     +L    +   G    
Sbjct: 4   IAGEQAMDGGGAAELRETHRLTGH--ADRAWSLAWNPNPGAGAGPVL----ASCGGDKTV 57

Query: 192 SLCVMDRDG-ANIRYLTPS-RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            +     DG  +   +     ++ +    +SP+ + +A A++D      ++         
Sbjct: 58  RIWKRAPDGVWDCSDVLDGVHERTVRSCAWSPDGKLLATASFD--GTTAIWEYSGGDFEC 115

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISAS 308
              +    + + +  +S +G     +  +D+A+ I+ V     +    +      ++   
Sbjct: 116 VATLEGHDNEVKSVSWSQSGSLLA-TCSRDKAVWIWEVQPGNEHECVAVLQGHTQDVKMV 174

Query: 309 -YSPDSSQIVFESDREGKEQLYVMQSNGSD----QKRISQDKEASYFDPVWS----PQGD 359
            + P  + +V  S       + V   +G D     + +++   + +   VWS     +GD
Sbjct: 175 QWHPILNVLVSVSY---DNTIRVWADDGDDDWHCVQTLTEAGNSGHSSTVWSVSFNQKGD 231

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            +           I     D SQ       +     +W    + L       G T
Sbjct: 232 RMVTCS-DDCTLKIWDTSVDLSQP-----TTGEGHESW----QHLSTLSGYHGRT 276


>gi|21231842|ref|NP_637759.1| peptidase [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|21113560|gb|AAM41683.1| peptidase [Xanthomonas campestris pv. campestris str. ATCC 33913]
          Length = 736

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 81/279 (29%), Gaps = 54/279 (19%)

Query: 198 RDGANIRYLTPSRDQILFE---PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            DG + R  +  R +  ++     +SP+ Q +A          RV  ++       + + 
Sbjct: 202 ADGQSTRLSSDGRAEDFYDLESVAWSPDSQHLAVYRVRPGYARRVTRVEAAPPGGGQPVV 261

Query: 255 NFR---------------------------------SMILAP-RFSSNGKRALISVQKDE 280
           + +                                    L+P ++ S+ +       +  
Sbjct: 262 HTQLYPKPGDAVDVERPVLFALDGSRREVDTALFGNPYALSPLQWRSDSRSVSFEYVQRG 321

Query: 281 AMDIYSV--DLQSNATERLTNTLF---INISASYSPD----SSQIVFESDREGKEQLYVM 331
              +  +  D Q+              +    S+  D      +I++ S+R+G   LY+ 
Sbjct: 322 FQRMRVIAVDAQTGRAHVAVGEDARTFVYADRSFRHDVEGRGDEILWISERDGWRHLYLF 381

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKF------SGEKFAIGVMKKDGSQER 384
                  KR          D +        I FT              +  +  DG Q  
Sbjct: 382 DGRSGKVKRQLTRGAWIVRDVLRVDDAQRRIWFTASGMDAGKDPYYRQLYSVDFDGRQLT 441

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKK-DGDTGSKLYSID 422
            L           +P G+  + +  + D     +L++ID
Sbjct: 442 RLTHSDADHDVAIAPDGQHYVDTYSRPDLPPVMELHAID 480



 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 57/300 (19%), Positives = 97/300 (32%), Gaps = 65/300 (21%)

Query: 107 GAQVLVTGRVIKEGKDRLRVE----FRL------WDVKDRKQIIGKKFFSSPASWRKIAH 156
           G Q +V  ++  +  D + VE    F L       D      + G  +  SP  WR  + 
Sbjct: 256 GGQPVVHTQLYPKPGDAVDVERPVLFALDGSRREVDTA----LFGNPYALSPLQWRSDSR 311

Query: 157 TISDDIYQSITGE----------------KGDFNSRILFVSES---VVSGIIKNSLCVMD 197
           ++S +  Q                      G+     ++   S    V G     L + +
Sbjct: 312 SVSFEYVQRGFQRMRVIAVDAQTGRAHVAVGEDARTFVYADRSFRHDVEGRGDEILWISE 371

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           RDG    YL   R   +        ++++    +   D+LRV       D A +RI    
Sbjct: 372 RDGWRHLYLFDGRSGKV--------KRQLTRGAWIVRDVLRV-------DDAQRRIWFTA 416

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           S + A      GK             +YSVD       RLT++   +   + +PD    V
Sbjct: 417 SGMDA------GKDPYY-------RQLYSVDFDGRQLTRLTHSDA-DHDVAIAPDGQHYV 462

Query: 318 FESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
               R     +  + + +G   +++ Q          W      +A  K    +  I  M
Sbjct: 463 DTYSRPDLPPVMELHAIDGRLLQQVEQGSIDKLQAAGWRAPETFVA--KGRDGRTDIWGM 520


>gi|308152013|emb|CBQ78833.1| amino acyl peptidase [Sporosarcina psychrophila]
          Length = 596

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 49/133 (36%), Gaps = 6/133 (4%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-- 362
            + + S D  ++VF ++  GK  L+ M    +     +   E S     + P+   +   
Sbjct: 19  TNFAVSSDEKRLVFNANLNGKMNLWAMDLPDTYPYLFAHRDE-SCNFIKFDPENRYVLAG 77

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP---SGRSLIFSRKKDGDTGSKLY 419
           F K   E + I  +  +G     L+     +   +S     G+ + +   K+  +     
Sbjct: 78  FDKDGDENYQIYAIPNEGGLPHPLITGDASEKYYFSHLSADGKCVYYETSKENPSFLNTR 137

Query: 420 SIDLNGRNETLIN 432
             +L    + L+N
Sbjct: 138 IRNLETGEDRLLN 150



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 52/128 (40%), Gaps = 5/128 (3%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--FESD 321
             SS+ KR + +   +  M+++++DL         +         + P++  ++  F+ D
Sbjct: 22  AVSSDEKRLVFNANLNGKMNLWAMDLPDTYPYLFAHRDESCNFIKFDPENRYVLAGFDKD 81

Query: 322 REGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKK 378
            +   Q+Y + + G      I+ D    Y+    S  G  + +  +K +       +   
Sbjct: 82  GDENYQIYAIPNEGGLPHPLITGDASEKYYFSHLSADGKCVYYETSKENPSFLNTRIRNL 141

Query: 379 DGSQERLL 386
           +  ++RLL
Sbjct: 142 ETGEDRLL 149



 Score = 40.4 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 33/98 (33%), Gaps = 2/98 (2%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSG 401
             +  +  +   S     + F      K  +  M    +   L    D +     + P  
Sbjct: 12  FFRTYTITNFAVSSDEKRLVFNANLNGKMNLWAMDLPDTYPYLFAHRDESCNFIKFDPEN 71

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           R ++    KDGD   ++Y+I   G     + T   AS+
Sbjct: 72  RYVLAGFDKDGDENYQIYAIPNEGGLPHPLIT-GDASE 108


>gi|317130173|ref|YP_004096455.1| 40-residue YVTN family beta-propeller repeat protein [Bacillus
           cellulosilyticus DSM 2522]
 gi|315475121|gb|ADU31724.1| 40-residue YVTN family beta-propeller repeat protein [Bacillus
           cellulosilyticus DSM 2522]
          Length = 482

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 85/268 (31%), Gaps = 58/268 (21%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R +    +QI      SPN+Q V + T      +  + +DT       +   F   +  
Sbjct: 58  VREIQLGHEQISHGIAMSPNKQVVYFGTGFQGKTVHAFDLDTEQSIKELK---FDEGVHG 114

Query: 263 PRFSSNGKRALISVQK-----------------------------------DEAMDIYSV 287
                +G    +++                                     ++   I+  
Sbjct: 115 IDIHPSGNYVYVALNAGLGEEGGNLAVVDAETFEVLAKIKTEDGPAHVSVTNDGSQIWVA 174

Query: 288 DLQSNATE-------RLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           ++ SN+         ++ +T+ +    +    SP+     F ++      + V+  N  +
Sbjct: 175 NVNSNSVSVIDAYTYQVMSTIPVGQMPNEVAVSPNGD-FAFSANVRSNS-ISVIDMNSFE 232

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPT 396
             +  +  E  +   V SP G  +           + V+  +  S    +  DS     +
Sbjct: 233 VLQEVEAGEGVHGVTV-SPDGKQVWTANNHSNN--VSVIDTETMSLITTIATDSYANHIS 289

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +SP G  + F   ++ +    +  ID N
Sbjct: 290 FSPDGEFV-FVTHREAN---NMVVIDRN 313



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 50/129 (38%), Gaps = 7/129 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN      A      I  + +    + +  +       +      S +GK+  +   
Sbjct: 205 AVSPNGDFAFSANVRSNSISVIDMNSFEVLQEVEAGEGVHGVT----VSPDGKQ--VWTA 258

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            + + ++  +D ++ +      T       S+SPD  + VF + RE    + + +++ S 
Sbjct: 259 NNHSNNVSVIDTETMSLITTIATDSYANHISFSPDG-EFVFVTHREANNMVVIDRNDYSI 317

Query: 338 QKRISQDKE 346
            ++IS  KE
Sbjct: 318 IEKISIGKE 326


>gi|115663074|ref|XP_782058.2| PREDICTED: similar to WD repeat domain 23 [Strongylocentrotus
           purpuratus]
 gi|115937275|ref|XP_001194060.1| PREDICTED: similar to WD repeat domain 23 [Strongylocentrotus
           purpuratus]
          Length = 523

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 74/193 (38%), Gaps = 17/193 (8%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +   D   +  V+L + +     + + +F + +    +S +G    +S  +D+ + IY  
Sbjct: 100 FTHNDRSQVGAVFLPNNQ-----RSVAHFPAKVFCGTYSMDG-SVFLSACQDQVIRIY-- 151

Query: 288 DLQSNATERLTNTLFINISAS-----YSPDSSQIVFESDREGKEQLYVM-QSNGSDQKRI 341
           D+++   ++       ++  S     +SPD + +++ S  E      +    +      +
Sbjct: 152 DVKNGYFKKFKEVRARDVGWSVLDTAFSPDGNYLIYSSWSECVHLCNIYGDYDTHTALNL 211

Query: 342 SQDKEASY--FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
               E  +  F   +S     I      G  + I   +K+    R+   + ++ A  ++ 
Sbjct: 212 RPSTEGHFCAFSIQFSNDNKEILAGANDGCLY-IYDREKNDRTLRIESHEDDVNAVCFAD 270

Query: 400 SGRSLIFSRKKDG 412
               ++FS   DG
Sbjct: 271 GSSQILFSGGDDG 283


>gi|297199589|ref|ZP_06916986.1| protease [Streptomyces sviceus ATCC 29083]
 gi|297147441|gb|EFH28630.1| protease [Streptomyces sviceus ATCC 29083]
          Length = 737

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 47/136 (34%), Gaps = 8/136 (5%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +PD S+    +      ++ +++    + + + + ++       +SP    +A++    +
Sbjct: 2   APDGSRAAVAAH---DGRVLLVERKTGEVREVDRSEDGDVRGLTFSPDSAWLAWSHPGPD 58

Query: 370 KF-AIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN--- 424
               + +    D S            AP ++  G+ L F   +  D     +  DL    
Sbjct: 59  PLCQLRLANTTDLSVTEATPLRFQDYAPAFTLDGKHLAFLSNRSFDPVYDEHVFDLAFVV 118

Query: 425 GRNETLINTPAYASDP 440
           G    LI   A    P
Sbjct: 119 GDRPHLITLAATTPSP 134



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 38/105 (36%), Gaps = 5/105 (4%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK- 278
           +P+  + A A +D     RV L++ +     +   +    +    FS +      S    
Sbjct: 2   APDGSRAAVAAHDG----RVLLVERKTGEVREVDRSEDGDVRGLTFSPDSAWLAWSHPGP 57

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           D    +   +    +    T   F + + +++ D   + F S+R 
Sbjct: 58  DPLCQLRLANTTDLSVTEATPLRFQDYAPAFTLDGKHLAFLSNRS 102



 Score = 40.0 bits (92), Expect = 0.79,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 52/155 (33%), Gaps = 12/155 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R +  S D  +    FSP+   +A+ ++   D L    +    D +       R    A
Sbjct: 27  VREVDRSEDGDVRGLTFSPDSAWLAW-SHPGPDPLCQLRLANTTDLSVTEATPLRFQDYA 85

Query: 263 PRFSSNGKRALISVQK--DEAMDIYSVDLQS--NATERLTNTLFINISASYSPDSSQIVF 318
           P F+ +GK       +  D   D +  DL         L        S  + P      F
Sbjct: 86  PAFTLDGKHLAFLSNRSFDPVYDEHVFDLAFVVGDRPHLITLAATTPSP-FGPQRHGRPF 144

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           E+ D++         S G+   RI  +  A    P
Sbjct: 145 EAPDKDETP-----DSEGTPTTRIDLEGLADRIVP 174


>gi|300772646|ref|ZP_07082516.1| dipeptidyl-peptidase IV [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760949|gb|EFK57775.1| dipeptidyl-peptidase IV [Sphingobacterium spiritivorum ATCC 33861]
          Length = 720

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/306 (16%), Positives = 101/306 (33%), Gaps = 60/306 (19%)

Query: 165 SITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRD---QILFEPRFS 220
                  D NS +LF  ++ V     +    + D+   N + +   +      L   +FS
Sbjct: 74  QSFQVSPDGNSLLLFANTQRVWRDNTRGDYWIFDK--KNKKLVQLGKGLPVSSLMFAKFS 131

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--------------APRFS 266
           P+ +KVAY +   +  + +  + +   +A  + G  R +                  R+S
Sbjct: 132 PDGKKVAYVS---KHNIYIEDLSSNTFKAITKDGTDRIINGTFDWAYEEEFGCQDGFRWS 188

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASY--SPDSSQIVFESDRE 323
            +G +        +    + +   +++    T    I +       +P S  I F     
Sbjct: 189 PDGTKIAYWKLDAKETRNFLMINNTDSLYSFT----IPVEYPKVGMNPSSCTIWF----- 239

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAF--TKFSGEKFAIGVMKKDG 380
                Y +    + +  I  D    Y   + W P    I             I V     
Sbjct: 240 -----YNVSDESTQKAGIEGDDIQHYIPRMEWVPDSRSIILQQLNRKQNVSKIIVCDAVN 294

Query: 381 SQERLLVE-----------DSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +  + + +             N   P+   W   G+  I+  +K+G    ++Y ID+ G+
Sbjct: 295 ATSKTIHQETDEAWIDIKARWNNGDPSGWDWINEGKEFIWLSEKNG--WRQIYKIDMQGK 352

Query: 427 NETLIN 432
            ETLI 
Sbjct: 353 -ETLIT 357



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 58/195 (29%), Gaps = 42/195 (21%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--------YSPDS--- 313
           ++++G  A  S        +  +    N     T  L    SA          SPD    
Sbjct: 27  WTADGN-AYYSFSAKGIDIVDLLHPDQNKPFLTTQELIPKDSAQALEVQSFQVSPDGNSL 85

Query: 314 -----SQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFS 367
                +Q V+  +  G    ++         ++ +    +S     +SP G  +A+    
Sbjct: 86  LLFANTQRVWRDNTRG--DYWIFDKKNKKLVQLGKGLPVSSLMFAKFSPDGKKVAYVS-- 141

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNL------------------QAPTWSPSGRSLIFSRK 409
             K  I +     +  + + +D                         WSP G  + + + 
Sbjct: 142 --KHNIYIEDLSSNTFKAITKDGTDRIINGTFDWAYEEEFGCQDGFRWSPDGTKIAYWKL 199

Query: 410 KDGDTGSKLYSIDLN 424
              +T + L   + +
Sbjct: 200 DAKETRNFLMINNTD 214



 Score = 43.5 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 68/217 (31%), Gaps = 22/217 (10%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDR---DGANIRYLTPSRDQILFEPR--FSPNQQKV 226
           D         E    G+  +S  +      D +  +      D   + PR  + P+ + +
Sbjct: 214 DSLYSFTIPVEYPKVGMNPSSCTIWFYNVSDESTQKAGIEGDDIQHYIPRMEWVPDSRSI 273

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGN----------FRSMILAPR---FSSNGKRAL 273
                + +  +   ++   ++   K I             R     P    + + GK  +
Sbjct: 274 ILQQLNRKQNVSKIIVCDAVNATSKTIHQETDEAWIDIKARWNNGDPSGWDWINEGKEFI 333

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQ--LYV 330
              +K+    IY +D+Q      +T   +  I   +    +  I F +      Q  LY 
Sbjct: 334 WLSEKNGWRQIYKIDMQGK-ETLITKDNYDVIQLDNIDQKADLIYFSASPTNATQKFLYK 392

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +  NG    R++  +         S  G L  F   S
Sbjct: 393 IGLNGGAASRVTPAQYKGTNTYTISSNGKLAIFNSKS 429



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 29/93 (31%), Gaps = 15/93 (16%)

Query: 355 SPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLI 405
           SP G+ +              +    +  K   +   L +    S+L    +SP G+ + 
Sbjct: 79  SPDGNSLLLFANTQRVWRDNTRGDYWIFDKKNKKLVQLGKGLPVSSLMFAKFSPDGKKVA 138

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +  K +      +Y  DL+      I       
Sbjct: 139 YVSKHN------IYIEDLSSNTFKAITKDGTDR 165


>gi|281357164|ref|ZP_06243653.1| hypothetical protein Vvad_PD2256 [Victivallis vadensis ATCC
           BAA-548]
 gi|281316195|gb|EFB00220.1| hypothetical protein Vvad_PD2256 [Victivallis vadensis ATCC
           BAA-548]
          Length = 310

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 55/148 (37%), Gaps = 18/148 (12%)

Query: 20  LLVLIGGFFPTSIHAFVKVATNSANYSPVS---IAFTKFVSIDE------LGGKVSEVVS 70
           LL+++   F     A           + +    IA   F S         LG  ++E++S
Sbjct: 4   LLMILAAVFTVHSAAVAADPAPQPETASLPVPTIAVLPFDSRGARAQDENLGKSIAELLS 63

Query: 71  KDLQRSDVFNLISQDSFKQKITN--------PDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
            +L     F L+ +    + +T          D   + +     GA++L+TG V + G +
Sbjct: 64  VELATQGDFELVERAELDKILTELHLSATGLVDKETQLKLGQLTGAKILITGSVFRSGDN 123

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPAS 150
              V  +L  V+  K +       S A+
Sbjct: 124 NYVVA-KLIGVETGKVLPAAAKGGSAAT 150


>gi|301778981|ref|XP_002924912.1| PREDICTED: dipeptidyl peptidase 4-like [Ailuropoda melanoleuca]
          Length = 852

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 45/137 (32%), Gaps = 34/137 (24%)

Query: 264 RFSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTLFI--NISA-SYSPDSS 314
             S +G+  L         +          DL +    RL     I  N    ++SP+  
Sbjct: 192 SVSPDGQFILFEYNYVKQWRHSYTASYAIYDLAN---RRLITEEKIPNNTQWITWSPEGH 248

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS------------------YFDPVWSP 356
           ++ +         +YV     S  +RI+   + +                  Y    WSP
Sbjct: 249 KLAYV----WNNDVYVKNEPNSSSQRITWTGKENVISNGITDWVYEEEIFSAYSALWWSP 304

Query: 357 QGDLIAFTKFSGEKFAI 373
           +G  +A+ +F+  +  +
Sbjct: 305 KGTFLAYAQFNDTEVPL 321



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 48/130 (36%), Gaps = 31/130 (23%)

Query: 308 SYSPDSSQIVFESD-----REGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLI 361
           S SPD   I+FE +     R      Y +  + ++++ I+++K   +     WSP+G  +
Sbjct: 192 SVSPDGQFILFEYNYVKQWRHSYTASYAI-YDLANRRLITEEKIPNNTQWITWSPEGHKL 250

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--------------------WSPSG 401
           A+   +     + V  +  S  + +         +                    WSP G
Sbjct: 251 AYVWNND----VYVKNEPNSSSQRITWTGKENVISNGITDWVYEEEIFSAYSALWWSPKG 306

Query: 402 RSLIFSRKKD 411
             L +++  D
Sbjct: 307 TFLAYAQFND 316



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 45/167 (26%), Gaps = 23/167 (13%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR-DQILFEPRFS 220
           I        G F   ILF    V       +      D AN R +T  +         +S
Sbjct: 188 INDYSVSPDGQF---ILFEYNYVKQWRHSYTASYAIYDLANRRLITEEKIPNNTQWITWS 244

Query: 221 PNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRIGNF----------RSMILAPRFSS 267
           P   K+AY   +D   ++                 I N            S   A  +S 
Sbjct: 245 PEGHKLAYVWNNDVYVKNEPNSSSQRITWTGKENVISNGITDWVYEEEIFSAYSALWWSP 304

Query: 268 NGKRALISVQKDEAMDIYSV------DLQSNATERLTNTLFINISAS 308
            G     +   D  + +          LQ   T R+       ++ +
Sbjct: 305 KGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRIPYPKAGAVNPT 351


>gi|325922822|ref|ZP_08184550.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           gardneri ATCC 19865]
 gi|325546709|gb|EGD17835.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           gardneri ATCC 19865]
          Length = 782

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/283 (12%), Positives = 82/283 (28%), Gaps = 62/283 (21%)

Query: 198 RDGANIRYLTPSRDQILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            DG   R     R    F+P    +SP+ Q++A          RV  ++       + + 
Sbjct: 206 ADGQLTRLSNDGRADDYFDPESIAWSPDSQRLAVYRVRPGLARRVTRVEAAPAGGGQPVV 265

Query: 255 NFR---------------------------------SMILAP-RFSSNGKRALISVQKDE 280
           + +                                    L+P ++ ++G+       +  
Sbjct: 266 HTQLYPKPGDAVDVERPVLFALDGTRADVDTVLFNTPYQLSPLQWRADGRSVTFEYVQRG 325

Query: 281 AMDIYSV--DLQSNATERLTNTLFINISASY-----------SPDSSQIVFESDREGKEQ 327
              +  +  D  +       +      + ++               +++++ S+R+G   
Sbjct: 326 FQRMRVIAVDAATGRA----HVAVGEDAPTFVYADRSFRHDVDAHGNEVLWISERDGWRH 381

Query: 328 LYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDG 380
           LY+    N +  ++I+Q                 I FT              +  +  +G
Sbjct: 382 LYLYDGRNSTIIEQITQGPWIVRDVLRVDDAQRRIWFTASGMHAGKDPYYRQLYSVDFEG 441

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI-FSRKKDGDTGSKLYSID 422
            Q   L           +  GR  +    + D     +L++ID
Sbjct: 442 RQLTRLTHTDADHDVAIADDGRHYVDVYSRPDLPPVMELHAID 484



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/243 (13%), Positives = 67/243 (27%), Gaps = 50/243 (20%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAP---RFSS 267
                PR SP+ +  A A     D   + L      +  +   + R+     P    +S 
Sbjct: 178 PADNTPRRSPDGRWEALA-----DGWNLLLRRVADGQLTRLSNDGRADDYFDPESIAWSP 232

Query: 268 NGKRALISVQKDEAMDIYS----VDLQSNATERLTN-----TLFINISASYSPDSSQIVF 318
           + +R  +   +       +               T         +++             
Sbjct: 233 DSQRLAVYRVRPGLARRVTRVEAAPAGGGQPVVHTQLYPKPGDAVDVE------------ 280

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA---IGV 375
                 +  L+ +    +D   +  +         W   G  + F            I V
Sbjct: 281 ------RPVLFALDGTRADVDTVLFNTPYQLSPLQWRADGRSVTFEYVQRGFQRMRVIAV 334

Query: 376 MKKDGSQERLLVEDSNLQAP---TWSPS----GRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               G     + ED+        ++       G  +++  ++DG     LY    +GRN 
Sbjct: 335 DAATGRAHVAVGEDAPTFVYADRSFRHDVDAHGNEVLWISERDGWRHLYLY----DGRNS 390

Query: 429 TLI 431
           T+I
Sbjct: 391 TII 393



 Score = 36.5 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 16/111 (14%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------NLQA 394
           +      +   P  SP G   A      + + + + +    Q   L  D       + ++
Sbjct: 172 VRDPGVPADNTPRRSPDGRWEALA----DGWNLLLRRVADGQLTRLSNDGRADDYFDPES 227

Query: 395 PTWSPSGRSLIFSRKKDG--DTGSKLYSIDLNGR----NETLINTPAYASD 439
             WSP  + L   R + G     +++ +    G     +  L   P  A D
Sbjct: 228 IAWSPDSQRLAVYRVRPGLARRVTRVEAAPAGGGQPVVHTQLYPKPGDAVD 278


>gi|325185268|emb|CCA19756.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 790

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 38/82 (46%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +   D R  +  + + + RS+  A  F+    + L S  +D ++ ++ + +   A + L+
Sbjct: 653 IRNWDLRTSQCTQLVASTRSVAYALAFNPQASQILASAHQDGSISLWDLRMARRALQSLS 712

Query: 299 NTLFINISASYSPDSSQIVFES 320
           +        S+SPD + +V  S
Sbjct: 713 HHRDECRCISWSPDGNWLVSGS 734



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 10/79 (12%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           +       S   ++     +  +   ++PQ   I  +       ++  ++      + L 
Sbjct: 653 IRNWDLRTSQCTQLVASTRSVAYALAFNPQASQILASAHQDGSISLWDLRMARRALQSLS 712

Query: 388 EDSNLQAP-TWSPSGRSLI 405
              +     +WSP G  L+
Sbjct: 713 HHRDECRCISWSPDGNWLV 731


>gi|302892009|ref|XP_003044886.1| chromatin associated protein [Nectria haematococca mpVI 77-13-4]
 gi|256725811|gb|EEU39173.1| chromatin associated protein [Nectria haematococca mpVI 77-13-4]
          Length = 607

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 71/206 (34%), Gaps = 20/206 (9%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-----ILAP 263
           + + ++   RFS + +   Y         +++ + T          N   M     I + 
Sbjct: 301 NHESVVCCVRFSHDGK---YVATGCNRSAQIFDVQTGEKVCVLEDHNASDMSADLYIRSV 357

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDR 322
            FS +G+    +  +D+ + ++  D+Q+       +    +  S  ++ D   I   S  
Sbjct: 358 CFSPDGRYLA-TGAEDKLIRVW--DIQTRTIRNHFSGHEQDIYSLDFARDGRTIASGS-- 412

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G   + +          ++   E        SP    +A      +   +  +      
Sbjct: 413 -GDRTVRLWDIEQGSNT-LTLTIEDGVTTVAISPDTQFVAAGSLD-KSVRVWDIHSGFLV 469

Query: 383 ERLLVEDSN---LQAPTWSPSGRSLI 405
           ERL   D +   + +  +SP+G+ L+
Sbjct: 470 ERLEGPDGHKDSVYSVAFSPNGKDLV 495


>gi|223934568|ref|ZP_03626489.1| hypothetical protein Cflav_PD6106 [bacterium Ellin514]
 gi|223897031|gb|EEF63471.1| hypothetical protein Cflav_PD6106 [bacterium Ellin514]
          Length = 524

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 93/284 (32%), Gaps = 23/284 (8%)

Query: 135 DRKQIIGKKFFSSPASWRKIAHTISDDI-YQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
             ++I+  +       W    H +  +I    +           L V  +     ++   
Sbjct: 219 SGREILYAQANGPLQVWEPTTHELLAEIPLDYLGNRAAFSPDGSLVVIGNSPCICLETRT 278

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             + +     +     + + +  P+F+ +   +   +      L++Y + +         
Sbjct: 279 WSIIKKFPRFQ---RGKQEYILVPQFTHDGSHLLLQSSQY--PLQIYDVRSWQQVDASPE 333

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
               +    P  S+NGKRA++ +Q   A+ ++  D        + +        S++PD 
Sbjct: 334 VPEGATQYVP--SNNGKRAVVRLQ-TGALVLW--DTVGRRQIAVLDNNTYLSHVSFAPDD 388

Query: 314 SQIVFES-------DREGKEQLYVMQSNGSDQKRISQDK----EASYFDPVWSPQGDLIA 362
           SQ+   +       D  G  ++ + ++   +     +      +      +WSP G  + 
Sbjct: 389 SQVAVSTAQIWGYLDFGGSPRVRIWKTKNGELLHELRPNIRMIDGGVDGLIWSPDGHYVL 448

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLI 405
              +      I V      Q R   ED   +      P G+ L+
Sbjct: 449 AAIYGTFTRNISVFSTKTGQHRGDFEDCGKVTGMALLPDGKQLV 492



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 45/154 (29%), Gaps = 14/154 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------YATYDDEDILRVYLMDTRI 246
           L + D  G     +  +   +     F+P+  +VA      +   D     RV +  T+ 
Sbjct: 359 LVLWDTVGRRQIAVLDNNTYLSHV-SFAPDDSQVAVSTAQIWGYLDFGGSPRVRIWKTKN 417

Query: 247 DRAPKRIGN----FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                 +          +    +S +G   L ++      +I     ++           
Sbjct: 418 GELLHELRPNIRMIDGGVDGLIWSPDGHYVLAAIYGTFTRNISVFSTKTGQHRGDFEDCG 477

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                +  PD  Q+V  S+     +++       
Sbjct: 478 KVTGMALLPDGKQLVTGSEFG---RIHFWDFETG 508


>gi|225154863|ref|ZP_03723361.1| oligogalacturonide lyase [Opitutaceae bacterium TAV2]
 gi|224804393|gb|EEG22618.1| oligogalacturonide lyase [Opitutaceae bacterium TAV2]
          Length = 390

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 52/178 (29%), Gaps = 37/178 (20%)

Query: 285 YSVDLQSNATERLTNTLF-----INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           Y+  L      +LT+           +  +    S+ +F SDR  +  L+ +     + +
Sbjct: 10  YADPLTGVPVTQLTHYRGHSHHFYFTNPGWYAGGSRFLFSSDRSNRTNLFGVDLASGEIE 69

Query: 340 RIS---QDKEASYFDPVWS-PQGDL--IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           + +        + FD V +   G    + F         + V+       R L       
Sbjct: 70  QFTDLPPPPPGARFDFVTACKNGRRDEVYFWH----DHTLRVVDLSTKTIRDL----LDV 121

Query: 394 APTWSP-------SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            P W P        G  L F        G +   I  +  N    N    A    W+ 
Sbjct: 122 DPAWKPSMTASSCDGAHLYF--------GLEQVVISEDYSNSRQNNLGIRAR---WLA 168



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 55/191 (28%), Gaps = 31/191 (16%)

Query: 182 ESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                  +   + VMD R G   +   P R   +    +  +  ++ Y          + 
Sbjct: 215 HEGPWEEVDCRIWVMDTRSGRRWKIEAPQRRFHIGHEYWYADGLRIGYHGITGGSETVI- 273

Query: 241 LMDTRIDRAPKRIGNFRSMILAPR-------FSSNGKRALISVQKDEAMDIY-SVDLQSN 292
                       +        AP+       +S +    +     D  M I+  +D +  
Sbjct: 274 -------GGASVVEGTPGHWHAPQQTVTGHIYSLDDNLVVGDAYHDGVMKIWMRIDGEIR 326

Query: 293 ATERLTNTLF------INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
               L           +++    S D   ++F SDR G   +Y           + QD  
Sbjct: 327 GPRVLCRHDCSFKIQQLHVHPRISSDGRYVIFTSDRGGYGNIYTAP--------LPQDAA 378

Query: 347 ASYFDPVWSPQ 357
           A    PVW+  
Sbjct: 379 AFNALPVWTGD 389



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 56/172 (32%), Gaps = 20/172 (11%)

Query: 284 IYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           I+ +D +S    ++      F      +  D  +I +     G E +    S        
Sbjct: 226 IWVMDTRSGRRWKIEAPQRRFHIGHEYWYADGLRIGYHGITGGSETVIGGASVVEGTPGH 285

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVE-------DSNL 392
               + +    ++S   +L+    +      I  M+ DG     R+L             
Sbjct: 286 WHAPQQTVTGHIYSLDDNLVVGDAYHDGVMKIW-MRIDGEIRGPRVLCRHDCSFKIQQLH 344

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             P  S  GR +IF+  + G     +Y+  L        +  A+ + P W G
Sbjct: 345 VHPRISSDGRYVIFTSDRGG--YGNIYTAPL------PQDAAAFNALPVWTG 388



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 5/73 (6%)

Query: 243 DTRIDRAPKRIGNFRSMI-----LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           D        ++ ++R          P + + G R L S  +    +++ VDL S   E+ 
Sbjct: 12  DPLTGVPVTQLTHYRGHSHHFYFTNPGWYAGGSRFLFSSDRSNRTNLFGVDLASGEIEQF 71

Query: 298 TNTLFINISASYS 310
           T+       A + 
Sbjct: 72  TDLPPPPPGARFD 84


>gi|328766802|gb|EGF76854.1| hypothetical protein BATDEDRAFT_30824 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 371

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/263 (17%), Positives = 78/263 (29%), Gaps = 49/263 (18%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           R+WD   R+ II     ++P                 +   K   N  +        SG 
Sbjct: 143 RIWDATQRRVIISLAQHTAP-----------------VMCVKWGGNGYLY-------SGS 178

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN--------------QQKVAYATYDDE 234
              ++ V D +   +  +       +     S +                 V       +
Sbjct: 179 RDKTIRVWDSNTGKLLNVLEGHAHWVNHLALSTDFILRTGPYGHTDPLAGGVERLASGSD 238

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA- 293
           D         R  +   R+   + ++    FS +G R L S   D+++ ++  D  +   
Sbjct: 239 DFTIFLWEPIRSKKPVARMTGHQQLVNHLSFSPDG-RILASASFDKSVKLW--DAATGKF 295

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              L   +       +S DS Q V    R+    L V        K          F   
Sbjct: 296 ITSLRGHVSPVYQVCWSSDSRQ-VLSGSRD--TTLKVWDIKTKKMKAELPGHADEVFSVD 352

Query: 354 WSPQGDLIAFTKFSGEKFAIGVM 376
           WSP GD +A    SG +  I  M
Sbjct: 353 WSPSGDRVA----SGGRDRILKM 371



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 82/275 (29%), Gaps = 53/275 (19%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D +    +Y        +    +SP+ + +A  + D      + L + +
Sbjct: 45  SGSGDTTVRIWDLNTETPQYTLTGHTNWVQIVSWSPDCEFLASGSMDS----TIRLWNPK 100

Query: 246 IDR-APKRIGNFRSMILAPRFSS----NGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +     +    S I +  +             S  KD  + I+          R+  +
Sbjct: 101 TGKAYGDALRAHSSCITSISWEPMHLNKACNRFASAAKDNTVRIWDA-----TQRRVIIS 155

Query: 301 LFINISAS----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L  + +      +    +  ++   R+  + + V  SN      + +           S 
Sbjct: 156 LAQHTAPVMCVKWG--GNGYLYSGSRD--KTIRVWDSNTGKLLNVLEGHAHWVNHLALST 211

Query: 357 QGDLIAFTKFSG-------------------EKFAIGVMKKDGSQ---ERLLVEDSNLQA 394
                 F   +G                   + F I + +   S+    R+      +  
Sbjct: 212 D-----FILRTGPYGHTDPLAGGVERLASGSDDFTIFLWEPIRSKKPVARMTGHQQLVNH 266

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            ++SP GR L        D   KL+     G+  T
Sbjct: 267 LSFSPDGRILA---SASFDKSVKLWDA-ATGKFIT 297



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 29/75 (38%), Gaps = 2/75 (2%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           + R    +      IL+  FS +GK    S   D  + I+ ++ ++     LT       
Sbjct: 17  VSRCTASLTGHTESILSVCFSPDGKLLA-SGSGDTTVRIWDLNTETPQYT-LTGHTNWVQ 74

Query: 306 SASYSPDSSQIVFES 320
             S+SPD   +   S
Sbjct: 75  IVSWSPDCEFLASGS 89


>gi|312218436|emb|CBX98382.1| similar to eukaryotic translation initiation factor subunit eIF2A
           [Leptosphaeria maculans]
          Length = 728

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 69/192 (35%), Gaps = 24/192 (12%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +S  S   + ++ ++  +G+    +   ++  + +  +SPN ++             +
Sbjct: 251 VDKSNKSYYGETNMYILSANGSFDSRIQLDKEGPIHDVSWSPNSKEFGVTYGYMPAKTTI 310

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +          +R     S  L PR    FS +G+  +++   + A D+   DL+ N  +
Sbjct: 311 FN---------QRAVPQHSFDLGPRNTIIFSPHGRFVIVAGFGNLAGDMDIYDLEKNFAK 361

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREG-KEQLYVMQSNGS--------DQKRISQD 344
             T          +SPD   I     S R      + +   +G         +   ++  
Sbjct: 362 VCTIKASNCTYCEWSPDGQHILTAITSPRLRVDNGVRIYHVSGGLMYHEEMTELYHVTWR 421

Query: 345 KEASYFDPVWSP 356
            + +   P+ SP
Sbjct: 422 PQPTSTHPLDSP 433



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 61/178 (34%), Gaps = 28/178 (15%)

Query: 264 RFSS--NGKRALISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             S   N   A+   ++        ++ V   +    + T      +   ++   + ++ 
Sbjct: 186 AVSPGKNHSVAVFVPERKGMPAAVKVFQVPQFTQPVSQKTFFKGDKVQLKWNELGTSLLV 245

Query: 319 ESDRE---------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +  E         G+  +Y++ +NGS   RI  DKE    D  WSP       T     
Sbjct: 246 LAQTEVDKSNKSYYGETNMYILSANGSFDSRIQLDKEGPIHDVSWSPNSKEFGVT----- 300

Query: 370 KFAIGVMKKDGS--QERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSI 421
               G M    +   +R + + S    P     +SP GR +I +   +      +Y +
Sbjct: 301 ---YGYMPAKTTIFNQRAVPQHSFDLGPRNTIIFSPHGRFVIVAGFGNLAGDMDIYDL 355



 Score = 37.3 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 51/151 (33%), Gaps = 9/151 (5%)

Query: 277 QKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                 ++Y +    +   R+  +        S+SP+S +        G         N 
Sbjct: 257 SYYGETNMYILSANGSFDSRIQLDKEGPIHDVSWSPNSKEFGVTY---GYMPAKTTIFNQ 313

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQA 394
               + S D        ++SP G  +    F      + +   + +  ++  ++ SN   
Sbjct: 314 RAVPQHSFDL-GPRNTIIFSPHGRFVIVAGFGNLAGDMDIYDLEKNFAKVCTIKASNCTY 372

Query: 395 PTWSPSGRSLIFSRKKDG---DTGSKLYSID 422
             WSP G+ ++ +        D G ++Y + 
Sbjct: 373 CEWSPDGQHILTAITSPRLRVDNGVRIYHVS 403


>gi|241957928|ref|XP_002421683.1| U3 small nucleolar RNA-associated protein, putative; U3
           snoRNA-associated protein, putative; periodic tryptophan
           protein, putative [Candida dubliniensis CD36]
 gi|223645028|emb|CAX39622.1| U3 small nucleolar RNA-associated protein, putative [Candida
           dubliniensis CD36]
          Length = 926

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 13/174 (7%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A+ +     +L VY          K+ G+F SM     +S +G R + +   D  +
Sbjct: 310 GEWLAFGSAKLGQLL-VYEWQLE-SYILKQQGHFDSMNTL-CYSPDGSRLV-TGSDDGKI 365

Query: 283 DIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            I+  D++S       T          ++    Q++F S  +G  + + +     + K  
Sbjct: 366 KIW--DVRSGFCLMTFTEHTSAVTQVQFAKRG-QVLFSSSLDGTIRAWDL-IRFRNFKTF 421

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +      +      P G++I         F I V        +LL   +  + P
Sbjct: 422 TATSRVQFNCLAVDPSGEVIVGGSQD--TFEIYVWSVQTG--QLLDSLTGHEGP 471


>gi|242210913|ref|XP_002471297.1| predicted protein [Postia placenta Mad-698-R]
 gi|220729581|gb|EED83452.1| predicted protein [Postia placenta Mad-698-R]
          Length = 143

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 48/146 (32%), Gaps = 13/146 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A  ++D      + + +           +    I    FS + K+   S  
Sbjct: 3   AFSPDSSLLASGSHDR----SIIMWNVFAGEKTVAFDSHDGFIDTLAFSPDSKKLA-SGS 57

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL--YVMQSNG 335
            D  + I+ V+              + +  ++SPD +Q+       G       V  +  
Sbjct: 58  VDFIVRIWHVE-SGRQQSLCKAHNALVMVVTFSPDGTQLA-----SGSADCDTRVWDAET 111

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLI 361
             +  + +  +   +   + P G  +
Sbjct: 112 GVEICVLKGHQGVLYSVQFWPDGRRL 137



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 8/137 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    S+ + +           S D  +    FSP+ +K+A  + D      V +    
Sbjct: 13  SGSHDRSIIMWNVFAGEKTVAFDSHDGFIDTLAFSPDSKKLASGSVD----FIVRIWHVE 68

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
             R         ++++   FS +G +   S   D    ++  D ++      L     + 
Sbjct: 69  SGRQQSLCKAHNALVMVVTFSPDGTQLA-SGSADCDTRVW--DAETGVEICVLKGHQGVL 125

Query: 305 ISASYSPDSSQIVFESD 321
            S  + PD  ++   SD
Sbjct: 126 YSVQFWPDGRRLSAASD 142



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 10/143 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +    L S   D ++ +++V          ++  FI+  A +SPDS ++   S   
Sbjct: 3   AFSPD-SSLLASGSHDRSIIMWNVFAGEKTVAFDSHDGFIDTLA-FSPDSKKLASGSV-- 58

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + +       Q+ + +   A      +SP G  +A      +     V   +   E
Sbjct: 59  -DFIVRIWHVESGRQQSLCKAHNALVMVVTFSPDGTQLASGSADCDT---RVWDAETGVE 114

Query: 384 --RLLVEDSNLQAPTWSPSGRSL 404
              L      L +  + P GR L
Sbjct: 115 ICVLKGHQGVLYSVQFWPDGRRL 137



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 38/101 (37%), Gaps = 10/101 (9%)

Query: 308 SYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           ++SPDSS +   S DR     + +      ++       +       +SP    +A    
Sbjct: 3   AFSPDSSLLASGSHDRS----IIMWNVFAGEKTVAFDSHDGFIDTLAFSPDSKKLASGSV 58

Query: 367 SGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLI 405
               F + +   +  +++ L    ++ +   T+SP G  L 
Sbjct: 59  D---FIVRIWHVESGRQQSLCKAHNALVMVVTFSPDGTQLA 96



 Score = 37.3 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 39/108 (36%), Gaps = 6/108 (5%)

Query: 167 TGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                 F   + F  +S    SG +   + +   +    + L  + + ++    FSP+  
Sbjct: 34  FDSHDGFIDTLAFSPDSKKLASGSVDFIVRIWHVESGRQQSLCKAHNALVMVVTFSPDGT 93

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           ++A  + D        + D         +   + ++ + +F  +G+R 
Sbjct: 94  QLASGSAD----CDTRVWDAETGVEICVLKGHQGVLYSVQFWPDGRRL 137


>gi|113968994|ref|YP_732787.1| dipeptidyl-peptidase IV [Shewanella sp. MR-4]
 gi|113883678|gb|ABI37730.1| dipeptidyl-peptidase IV. Serine peptidase. MEROPS family S09B
           [Shewanella sp. MR-4]
          Length = 763

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 68/166 (40%), Gaps = 13/166 (7%)

Query: 202 NIRYLTPSRDQILFEPR--FSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRS 258
           N   L+  +++ ++ PR  + P+ + +++     D+  L + L+       PK +   RS
Sbjct: 294 NWVTLSDDKNKDIYLPRVDWLPDSKHLSFQWQSRDQQKLDLQLVALDALTKPKTLVKERS 353

Query: 259 -----MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                +     F       + + ++D    +Y  DL+     +LT   +      Y  ++
Sbjct: 354 DAWVNLNNDLHFLKQQSAFIWASERDGFNHLYLFDLKGKLKTQLTKGNWAVDELEYIDET 413

Query: 314 SQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +  V+ + R+       LY +   G   +R+S   EA   +PV++ 
Sbjct: 414 AGWVYFTGRKDTPIEKHLYRVSLAGGKVERVS--SEAGMHNPVFAD 457



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 59/195 (30%), Gaps = 57/195 (29%)

Query: 261 LAPR---FSSNGKRALISVQKDEA---MDIYSVDLQSNA--------------------- 293
            +PR    S +G+R      + +     D++ +D+++                       
Sbjct: 61  TSPRGLKLSPDGQRVTYLAGRKDNQNFYDLWQMDVKTGESSLLLNADKLASNELSDEEKA 120

Query: 294 --TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               +      I +   ++ DS  ++  +       LY      +   ++    E    D
Sbjct: 121 RRERQRIYGEGI-MEYFWADDSKALLIPA----SGNLYYFSLADNSVSQL-PIGEGFATD 174

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQ 393
              SP+G+ ++F +       + V+     +   +  D                    + 
Sbjct: 175 ARLSPKGNFVSFVRDQ----NLYVLNLATKKLEAMTTDGGGAIKNAMAEFVAQEEMDRMT 230

Query: 394 APTWSPSGRSLIFSR 408
              W+P   ++ F+R
Sbjct: 231 GYWWAPDESAIAFTR 245



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 43/341 (12%), Positives = 101/341 (29%), Gaps = 82/341 (24%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV----------MDRDGANI--- 203
           +++D+    +   +G      L    + VS +   +L V          M  DG      
Sbjct: 156 SLADNSVSQLPIGEGFATDARLSPKGNFVSFVRDQNLYVLNLATKKLEAMTTDGGGAIKN 215

Query: 204 ---RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA----------- 249
               ++       +    ++P++  +A+   D+  +  V   +   D             
Sbjct: 216 AMAEFVAQEEMDRMTGYWWAPDESAIAFTRIDESGVELVTRNEIYADGIKLTEQRYPAAG 275

Query: 250 ----PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                 ++G       A  +        +++  D+  DIY   +                
Sbjct: 276 KNNVEIQLGVVALNNKAINW--------VTLSDDKNKDIYLPRVD--------------- 312

Query: 306 SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--- 361
              + PDS  + F+   R+ ++    + +  +  K  +  KE S      +     +   
Sbjct: 313 ---WLPDSKHLSFQWQSRDQQKLDLQLVALDALTKPKTLVKERSDAWVNLNNDLHFLKQQ 369

Query: 362 ---AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG--------RSLIFSRKK 410
               +         + +    G  +  L + +      W+             + F+ +K
Sbjct: 370 SAFIWASERDGFNHLYLFDLKGKLKTQLTKGN------WAVDELEYIDETAGWVYFTGRK 423

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDP----QWVGFMD 447
           D      LY + L G     +++ A   +P        ++D
Sbjct: 424 DTPIEKHLYRVSLAGGKVERVSSEAGMHNPVFADSQSVYLD 464


>gi|145221375|ref|YP_001132053.1| hypothetical protein Mflv_0780 [Mycobacterium gilvum PYR-GCK]
 gi|315441742|ref|YP_004074621.1| hypothetical protein Mspyr1_00510 [Mycobacterium sp. Spyr1]
 gi|145213861|gb|ABP43265.1| conserved hypothetical protein [Mycobacterium gilvum PYR-GCK]
 gi|315260045|gb|ADT96786.1| uncharacterized conserved protein [Mycobacterium sp. Spyr1]
          Length = 909

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/224 (17%), Positives = 75/224 (33%), Gaps = 26/224 (11%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKD 279
           P+   V           +V ++D    R  +     F +       + +GK A IS    
Sbjct: 465 PDGNSVVI----GGRNGQVAVVDPMTTRVIRTFDIGFGNHAEGVYVTPDGKYAWIS--GG 518

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQ 338
               ++ +DL + A  ++   +        SPD S+     DR +  +++ ++ +     
Sbjct: 519 YYQPLFRLDLSTGAIGQV--QIDYGAGGVLSPDGSKFYTVVDRHDYGQRIEIVDTATGAI 576

Query: 339 KRISQDKE---ASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKDGS----QERLLVEDS 390
                  E    +  D   SP G  + A    S     + V+         Q ++  E +
Sbjct: 577 SSYDYRSESVHRNLIDLAVSPDGKHLYARIAASQTSNRLDVIDAATGVVVAQTQVGSEAA 636

Query: 391 NLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            L  P    SP G  +  +      TG  +  +  N  +  L+ 
Sbjct: 637 LLGLPGMAISPEGNRIYLA------TGDSITVVRANSTDRPLLP 674


>gi|323528303|ref|YP_004230455.1| WD-40 repeat-containing protein [Burkholderia sp. CCGE1001]
 gi|323385305|gb|ADX57395.1| WD-40 repeat-containing protein [Burkholderia sp. CCGE1001]
          Length = 386

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 71/197 (36%), Gaps = 21/197 (10%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           ++    + L+D +  R  + + +         FS +GK  L++ + D+ + +Y    ++ 
Sbjct: 174 NKPPAEIALVDMKTWRVVRSVTSGHETEGI-EFSRDGKNMLVTNEGDDTVSVY--HARTG 230

Query: 293 ATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           A  R T  L           SPD  + V   +     +L V+ +      + + D +   
Sbjct: 231 APVR-TVKLAPGGRPRGIRLSPDGKEYVVTLES--LSKLVVIDARTFKVLK-TVDTKLGP 286

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIF 406
           +   +SP G  +       +   +     DG     L +          +++P G  L+ 
Sbjct: 287 YGVAYSPDGKRLFVAAAREQTVQVF----DGHSYDHLADVPVGQRCWHFSFTPDGAKLLV 342

Query: 407 SRKKDGDTGSKLYSIDL 423
           +  +       +Y +D 
Sbjct: 343 ACGRS----DAVYVLDA 355



 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 59/143 (41%), Gaps = 12/143 (8%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           R GA +R +  +        R SP+ ++        E + ++ ++D R  +  K +    
Sbjct: 228 RTGAPVRTVKLAPGGRPRGIRLSPDGKEYVVT---LESLSKLVVIDARTFKVLKTVDTKL 284

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQ 315
                  +S +GKR  ++  +++ + ++      ++ + L +          S++PD ++
Sbjct: 285 GP-YGVAYSPDGKRLFVAAAREQTVQVF----DGHSYDHLADVPVGQRCWHFSFTPDGAK 339

Query: 316 IVFESDREGKEQLYVMQSNGSDQ 338
           ++    R   + +YV+ +     
Sbjct: 340 LLVACGRS--DAVYVLDARSYQP 360


>gi|194039487|ref|XP_001927037.1| PREDICTED: WD repeat-containing protein 61 [Sus scrofa]
          Length = 305

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 113 AFSPDSQYLATGTHVGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 168 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 223

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 224 LAGTLSGHASWVLNVAFCPD 243



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 91/284 (32%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQI  K   + P     +A 
Sbjct: 57  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQI--KSIDAGPVDAWTLA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 114 -FSPDSQYLAT---GTHVGKVNI--FGVESGKKEYSL--------------DTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L+      ++ ++ PD +           + + V   
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTHF---VSSSSDKSVKVWDV 261

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I +  
Sbjct: 262 GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHIYD 302


>gi|66768031|ref|YP_242793.1| peptidase [Xanthomonas campestris pv. campestris str. 8004]
 gi|66573363|gb|AAY48773.1| peptidase [Xanthomonas campestris pv. campestris str. 8004]
          Length = 778

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/279 (13%), Positives = 81/279 (29%), Gaps = 54/279 (19%)

Query: 198 RDGANIRYLTPSRDQILFE---PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            DG + R  +  R +  ++     +SP+ Q +A          RV  ++       + + 
Sbjct: 202 ADGQSTRLSSDGRAEDFYDLESVAWSPDSQHLAVYRVRPGYARRVTRVEAAPPGGGQPVV 261

Query: 255 NFR---------------------------------SMILAP-RFSSNGKRALISVQKDE 280
           + +                                    L+P ++ S+ +       +  
Sbjct: 262 HTQLYPKPGDAVDVERPVLFALDGSRREVDTALFGNPYALSPLQWRSDSRSVSFEYVQRG 321

Query: 281 AMDIYSV--DLQSNATERLTNTLF---INISASYSPD----SSQIVFESDREGKEQLYVM 331
              +  +  D Q+              +    S+  D      +I++ S+R+G   LY+ 
Sbjct: 322 FQRMRVIAVDAQTGRAHVAVGEDARTFVYADRSFRHDVEGRGDEILWISERDGWRHLYLF 381

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKF------SGEKFAIGVMKKDGSQER 384
                  KR          D +        I FT              +  +  DG Q  
Sbjct: 382 DGRSGKVKRQLTRGAWIVRDVLRVDDAQRRIWFTASGMDAGKDPYYRQLYSVDFDGRQLT 441

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKK-DGDTGSKLYSID 422
            L           +P G+  + +  + D     +L++ID
Sbjct: 442 RLTHSDADHDVAIAPDGQHYVDTYSRPDLPPVMELHAID 480



 Score = 39.6 bits (91), Expect = 0.96,   Method: Composition-based stats.
 Identities = 57/300 (19%), Positives = 97/300 (32%), Gaps = 65/300 (21%)

Query: 107 GAQVLVTGRVIKEGKDRLRVE----FRL------WDVKDRKQIIGKKFFSSPASWRKIAH 156
           G Q +V  ++  +  D + VE    F L       D      + G  +  SP  WR  + 
Sbjct: 256 GGQPVVHTQLYPKPGDAVDVERPVLFALDGSRREVDTA----LFGNPYALSPLQWRSDSR 311

Query: 157 TISDDIYQSITGE----------------KGDFNSRILFVSES---VVSGIIKNSLCVMD 197
           ++S +  Q                      G+     ++   S    V G     L + +
Sbjct: 312 SVSFEYVQRGFQRMRVIAVDAQTGRAHVAVGEDARTFVYADRSFRHDVEGRGDEILWISE 371

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           RDG    YL   R   +        ++++    +   D+LRV       D A +RI    
Sbjct: 372 RDGWRHLYLFDGRSGKV--------KRQLTRGAWIVRDVLRV-------DDAQRRIWFTA 416

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           S + A      GK             +YSVD       RLT++   +   + +PD    V
Sbjct: 417 SGMDA------GKDPYY-------RQLYSVDFDGRQLTRLTHSDA-DHDVAIAPDGQHYV 462

Query: 318 FESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
               R     +  + + +G   +++ Q          W      +A  K    +  I  M
Sbjct: 463 DTYSRPDLPPVMELHAIDGRLLQQVEQGSIDKLQAAGWRAPETFVA--KGRDGRTDIWGM 520


>gi|147921129|ref|YP_685060.1| putative alkaline serine protease [uncultured methanogenic archaeon
           RC-I]
 gi|56295539|emb|CAH04782.1| alkaline serine protease [uncultured archaeon]
 gi|110620456|emb|CAJ35734.1| putative alkaline serine protease [uncultured methanogenic archaeon
           RC-I]
          Length = 795

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/212 (16%), Positives = 66/212 (31%), Gaps = 24/212 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+   V  A      +  +   +  + R          + +    S +G R  +    
Sbjct: 532 HSPDGSLVYVAVEGLNRVAIISPANNTVLRIINVGSEPHGLAI----SPDGTRLYVG--N 585

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISAS--Y-SPDSSQIVFESDREGKEQLYVMQSNG 335
             +  I  +D    +  R+  T+         +  PD +++   + +     +YV+   G
Sbjct: 586 YGSNSITIIDTSDTSQPRIIKTINGITKPHQLWLHPDGNRLYAGAYQA--NNVYVVNVAG 643

Query: 336 -SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSN 391
            S     +      YF     P G+ +    +      +     D S   LL      + 
Sbjct: 644 DSGIIEATIAGNKPYF-ISLDPAGEKLFVANYGANNIQVY----DASSLALLSTINTAAG 698

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +P  SP G  L +      D+ S L   D 
Sbjct: 699 PLSPIVSPDGNRLYYVT----DSNSNLIIADA 726



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 88/288 (30%), Gaps = 27/288 (9%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKK-------------FFSSPASWRKIAHTISDDI 162
           V   G + + V  +  +      I G +             + +     R    + +++ 
Sbjct: 499 VSNYGSNTVSVIDQSTNTVTGTIITGSRPYGIVHSPDGSLVYVAVEGLNRVAIISPANNT 558

Query: 163 YQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRF 219
              I     + +   +    +   V     NS+ ++D  D +  R +            +
Sbjct: 559 VLRIINVGSEPHGLAISPDGTRLYVGNYGSNSITIIDTSDTSQPRIIKTINGITKPHQLW 618

Query: 220 -SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
             P+  ++    Y   ++  V +            GN    I        G++  ++   
Sbjct: 619 LHPDGNRLYAGAYQANNVYVVNVAGDSGIIEATIAGNKPYFI---SLDPAGEKLFVA--N 673

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             A +I   D  S A     NT    +S   SPD +++ + +D      L +  +     
Sbjct: 674 YGANNIQVYDASSLALLSTINTAAGPLSPIVSPDGNRLYYVTDS--NSNLIIADAQDYST 731

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +    A       +P G  +  T  +    ++ V+        +L
Sbjct: 732 IK-TVKCGAGVRGIACTPDGSRVYVTNMN--SHSVTVVDVSDDAGTVL 776


>gi|281210299|gb|EFA84466.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 472

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 74/205 (36%), Gaps = 39/205 (19%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +SSNG           +  +YS+   D+ S     L      N   SYSP S++ +  +
Sbjct: 247 SWSSNGLYLA-----SGSNQLYSIVLWDVASRVPTLLPRYGG-NTLLSYSPISNEFLLSA 300

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-------- 372
            RE   +++       + K+   ++  +Y    W+P GD +A +      F         
Sbjct: 301 SRE-NFRIFDTSKWDYNNKQ--WNQSFNYVSCAWTPAGDYLAISYNDQINFIQCKNKALE 357

Query: 373 -----IGVMKKDG-SQERLLVE---DSNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSI 421
                + V K       +   E     +++    SP G    +IF R +  +    L ++
Sbjct: 358 TSGDLVYVEKTTTYKAYQNNTEVYVGGHIKKIAISPDGNRLAVIFLRNRSSNDNDTLVAL 417

Query: 422 DLNGRNETLINTPAYASDPQWVGFM 446
                   L  TP  +  P+  GF+
Sbjct: 418 ------YRLKTTPNLSLTPR--GFL 434


>gi|126313963|ref|XP_001373683.1| PREDICTED: similar to Notchless homolog 1 (Drosophila) [Monodelphis
           domestica]
          Length = 586

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 64/178 (35%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T+      
Sbjct: 203 VARCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDSTVRFWDL---STETPHFTSRGHRHW 258

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQ--KRISQDKEA----SYFDPVWS 355
            +S ++SPD  ++       G    Q+ +   N   Q  + ++   +     S+     +
Sbjct: 259 VLSIAWSPDGKKLA-----SGCKNGQILLWDPNTGQQLGRGLAGHSKWITGLSWEPLHMN 313

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + +     G  +R+L     ++    W   G  L++S  +D
Sbjct: 314 PECRYVASSSKDGS---VRIWDTSMGRCDRILTGHTQSVTCVRWGGDG--LLYSASQD 366



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 8/154 (5%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
              R    +   S  G   L+S   D  + ++S        +R+T    +     +SPD+
Sbjct: 426 AQSRPWTFSVALSGLGPERLVSGSDDFTLFLWSPAEDKKPLQRMTGHQALINEVLFSPDA 485

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             I   S     + + +  S         +   A+ +   WS    L+           +
Sbjct: 486 RIIASASF---DKSVKLWDSKTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDST---L 539

Query: 374 GVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
            V      +  + +     +     WSP G+ + 
Sbjct: 540 KVWDVKTRKLAVDLPGHADEVFAVDWSPDGQRVA 573



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 41/323 (12%), Positives = 87/323 (26%), Gaps = 92/323 (28%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------------------ 227
           SG   +++   D       + +      +    +SP+ +K+A                  
Sbjct: 231 SGSGDSTVRFWDLSTETPHFTSRGHRHWVLSIAWSPDGKKLASGCKNGQILLWDPNTGQQ 290

Query: 228 ---------------------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                                      Y     +D   V + DT + R  + +      +
Sbjct: 291 LGRGLAGHSKWITGLSWEPLHMNPECRYVASSSKDG-SVRIWDTSMGRCDRILTGHTQSV 349

Query: 261 LAPRFSSNGKRALISVQKDEAMDIY-------------------SVDLQSNATERLTNTL 301
              R+  +G   L S  +D  + ++                   ++ L ++    L    
Sbjct: 350 TCVRWGGDG--LLYSASQDRTIKVWRPHDGVLCRTLQGHAHWVNTMALSTDYV--LRTGA 405

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
           F    AS +    +   ES  + +   + +  +G   +R+    +  +   +WSP  D  
Sbjct: 406 FEPAEASINAQDVRGSCESRAQSRPWTFSVALSGLGPERLVSGSD-DFTLFLWSPAEDKK 464

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              + +G                     + +    +SP  R +        D   KL+  
Sbjct: 465 PLQRMTG-------------------HQALINEVLFSPDARIIA---SASFDKSVKLWDS 502

Query: 422 DLNGRNETLINTPAYASDPQWVG 444
                  +L    A      W  
Sbjct: 503 KTGKYLASLRGHVAAVYQIAWSA 525


>gi|322806019|emb|CBZ03586.1| basic protein [Clostridium botulinum H04402 065]
          Length = 1484

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 22/144 (15%)

Query: 304 NISASYSPDSSQI------VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           N + + S + S        V+  +   K  LY     G    +IS DK            
Sbjct: 345 NTAGNISNNGSAAMDLDFYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINVI----- 399

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           GD I ++ ++     I  MKKDG+++++L +D+         SG  + ++ + D     +
Sbjct: 400 GDWIYYSNYNDNG-KIYKMKKDGTKKQILCDDTATYITV---SGGVVYYANQSD---KGR 452

Query: 418 LYSIDLNGRNETLINTPAYASDPQ 441
           LY I+ +G     I+  A   DP 
Sbjct: 453 LYKINTDGT----IDGGASNRDPA 472



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 41/222 (18%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y  Y +          T   R   +I   ++  +       G     S   ++   IY 
Sbjct: 362 FYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINV----IGDWIYYS-NYNDNGKIYK 416

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +       + L      + +A+Y   S  +V+ +++  K +LY + ++G      + D  
Sbjct: 417 MKKDGTKKQIL-----CDDTATYITVSGGVVYYANQSDKGRLYKINTDG------TIDGG 465

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           AS  DP               G+   + VM  D        + +N         G  + +
Sbjct: 466 ASNRDPA--------------GKVHGMPVMD-DYGNYNKATDQANFINVV----GDWIYY 506

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT---PAYASDPQWVGF 445
           S   DG    K+Y+++ +G     +N            W  +
Sbjct: 507 SNFSDGH---KIYTVNKDGNIRRKVNDEWADGIQIVGAWAYY 545


>gi|308458251|ref|XP_003091472.1| CRE-SWD-3.3 protein [Caenorhabditis remanei]
 gi|308256664|gb|EFP00617.1| CRE-SWD-3.3 protein [Caenorhabditis remanei]
          Length = 424

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 87/228 (38%), Gaps = 26/228 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             + +      + +   +FSP  + +  A+ D     ++ + +T      + +   +  +
Sbjct: 125 YTVIHTLKGHTKSISVVKFSPCGRYLGTASADK----QIKIWETEKFNCERTLYGHKLGV 180

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               ++SNG     S   D  + ++SV+        +        S  ++P SS +V   
Sbjct: 181 NDISWTSNGAFLA-SASDDTTVKLFSVE-TGICLRTMKGHTSYVFSCDFNPQSSLVV--- 235

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-D 379
                E + V         R+            ++  G+LIA + F G    I +    D
Sbjct: 236 SGGYDETIRVWDVLNGQCVRMLPAHTDPVTSVAFNHMGNLIASSSFEG---CIRIWDLSD 292

Query: 380 GSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGS--KLYSI 421
           G   + LV+     AP    +++P+G+ L+      G+ GS  K++S+
Sbjct: 293 GRCLQTLVD--LDHAPVTYASFTPNGKYLV-----SGELGSTIKIWSL 333


>gi|297285652|ref|XP_002802846.1| PREDICTED: WD repeat-containing protein 51A-like isoform 2 [Macaca
           mulatta]
          Length = 369

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 77/221 (34%), Gaps = 18/221 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V      +  Y        +    FSP+   +A  + D    +R+++ + + +    R
Sbjct: 5   LMVWHMKPQSRAYRFTGHKDAITCVNFSPSGHLLASGSRD--KTVRIWVPNVKGESTAFR 62

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                + + +  F S+G+   ++   D+ + +++   Q      L+  +     A +SPD
Sbjct: 63  --AHTATVRSVHFCSDGQS-FVTASDDKTVKVWATHRQ-KFLFSLSQHINWVRCAKFSPD 118

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              IV  SD    + + +   +  +      +         + P G  IA          
Sbjct: 119 GRLIVSASD---DKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKV 175

Query: 373 IGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
             V        RLL    +  + +   ++ PSG  LI +  
Sbjct: 176 WDV-----RTHRLLQHYHLHSAAVNGLSFHPSGNYLITASS 211



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 36/261 (13%), Positives = 73/261 (27%), Gaps = 33/261 (12%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           ++R   H   D I        G            + SG    ++ +   +         +
Sbjct: 16  AYRFTGHK--DAITCVNFSPSG----------HLLASGSRDKTVRIWVPNVKGESTAFRA 63

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    F  + Q    A+ D      V +  T   +    +    + +   +FS +G
Sbjct: 64  HTATVRSVHFCSDGQSFVTASDDK----TVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 119

Query: 270 KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R ++S   D+ + ++  D  S                  + P  + I           +
Sbjct: 120 -RLIVSASDDKTVKLW--DKSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGM---DNTV 173

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V         +      A+     + P G+ +           + +M     + RLL  
Sbjct: 174 KVWDVRTHRLLQHYHLHSAAVNGLSFHPSGNYLITASSDSTLKILDLM-----EGRLLYT 228

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
               Q P       ++ FSR 
Sbjct: 229 LHGHQGPA-----TTVAFSRT 244


>gi|237795192|ref|YP_002862744.1| hypothetical protein CLJ_B1961 [Clostridium botulinum Ba4 str. 657]
 gi|229261631|gb|ACQ52664.1| hypothetical protein CLJ_B1961 [Clostridium botulinum Ba4 str. 657]
          Length = 1482

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 22/144 (15%)

Query: 304 NISASYSPDSSQI------VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           N + + S + S        V+  +   K  LY     G    +IS DK            
Sbjct: 341 NTAGNISNNGSAAMDLDFYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINVI----- 395

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           GD I ++ ++     I  MKKDG+++++L +D+         SG  + ++ + D     +
Sbjct: 396 GDWIYYSNYNDNG-KIYKMKKDGTKKQILCDDTATYITV---SGGVVYYANQSD---KGR 448

Query: 418 LYSIDLNGRNETLINTPAYASDPQ 441
           LY I+ +G     I+  A   DP 
Sbjct: 449 LYKINTDGT----IDGGASNRDPA 468



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 41/222 (18%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y  Y +          T   R   +I   ++  +       G     S   ++   IY 
Sbjct: 358 FYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINV----IGDWIYYS-NYNDNGKIYK 412

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +       + L      + +A+Y   S  +V+ +++  K +LY + ++G      + D  
Sbjct: 413 MKKDGTKKQIL-----CDDTATYITVSGGVVYYANQSDKGRLYKINTDG------TIDGG 461

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           AS  DP               G+   + VM  D        + +N         G  + +
Sbjct: 462 ASNRDPA--------------GKVHGMPVMD-DYGNYNKATDQANFINVV----GDWIYY 502

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT---PAYASDPQWVGF 445
           S   DG    K+Y+++ +G     +N            W  +
Sbjct: 503 SNFSDGH---KIYTVNKDGNIRRKVNDEWADGIQIVGAWAYY 541


>gi|226949025|ref|YP_002804116.1| hypothetical protein CLM_1939 [Clostridium botulinum A2 str. Kyoto]
 gi|226842773|gb|ACO85439.1| hypothetical protein CLM_1939 [Clostridium botulinum A2 str. Kyoto]
          Length = 1482

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 22/144 (15%)

Query: 304 NISASYSPDSSQI------VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           N + + S + S        V+  +   K  LY     G    +IS DK            
Sbjct: 341 NTAGNISNNGSAAMDLDFYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINVI----- 395

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           GD I ++ ++     I  MKKDG+++++L +D+         SG  + ++ + D     +
Sbjct: 396 GDWIYYSNYNDNG-KIYKMKKDGTKKQILCDDTATYITV---SGGVVYYANQSD---KGR 448

Query: 418 LYSIDLNGRNETLINTPAYASDPQ 441
           LY I+ +G     I+  A   DP 
Sbjct: 449 LYKINTDGT----IDGGASNRDPA 468



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 41/222 (18%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y  Y +          T   R   +I   ++  +       G     S   ++   IY 
Sbjct: 358 FYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINV----IGDWIYYS-NYNDNGKIYK 412

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +       + L      + +A+Y   S  +V+ +++  K +LY + ++G      + D  
Sbjct: 413 MKKDGTKKQIL-----CDDTATYITVSGGVVYYANQSDKGRLYKINTDG------TIDGG 461

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           AS  DP               G+   + VM  D        + +N         G  + +
Sbjct: 462 ASNRDPA--------------GKVHGMPVMD-DYGNYNKATDQANFINVV----GDWIYY 502

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT---PAYASDPQWVGF 445
           S   DG    K+Y+++ +G     +N            W  +
Sbjct: 503 SNFSDGH---KIYTVNKDGNIRRKVNDEWADGIQIVGAWAYY 541


>gi|254472949|ref|ZP_05086347.1| WD-repeat family protein [Pseudovibrio sp. JE062]
 gi|211957670|gb|EEA92872.1| WD-repeat family protein [Pseudovibrio sp. JE062]
          Length = 325

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 71/200 (35%), Gaps = 22/200 (11%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL--FIN 304
                +    ++ +L    S +GK  +          I  V    +  E L      +I+
Sbjct: 36  GGPETQTPVHKNGLLCATPSLDGKSLI---TGGGDGKICKVSADGSVEE-LAEQPRKWID 91

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           I A+   DS  + F S R    +L   +       R       ++    ++P+G  +A +
Sbjct: 92  IIAAGPQDS--VAFASGRTAWVRLKTGEIKEFQLPR-------AFAGLAFAPKGMRLAAS 142

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           ++ G    +  +   G   + L         T+SP G+ L+ + +++   G +L     +
Sbjct: 143 RYDG--VTLFWVNAAG-DPQELSWKGAHGHVTYSPDGKYLVTTMQENALHGWRL----AD 195

Query: 425 GRNETLINTPAYASDPQWVG 444
            ++  +   PA      W  
Sbjct: 196 SQDMRMTGYPAKVKSVSWSA 215



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 89/276 (32%), Gaps = 18/276 (6%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           + GK   +      KI    +D   + +  +   +   I    +  V+     +  V  +
Sbjct: 56  LDGKSLITGGGDG-KICKVSADGSVEELAEQPRKWIDIIAAGPQDSVAFASGRTAWVRLK 114

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
            G    +  P     L    F+P   ++A + YD      V L        P+ + +++ 
Sbjct: 115 TGEIKEFQLPRAFAGL---AFAPKGMRLAASRYDG-----VTLFWVNAAGDPQEL-SWKG 165

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                 +S +GK  + ++Q++ A+  +   L  +   R+T       S S+S     +  
Sbjct: 166 AHGHVTYSPDGKYLVTTMQEN-ALHGWR--LADSQDMRMTGYPAKVKSVSWSAKGKYLA- 221

Query: 319 ESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            S  +       +      G     +    ++        PQ +++A     G   A+  
Sbjct: 222 TSGAQAAILWPFMGKSGPMGQAPLELGVRGDSMVTTVCCHPQEEMLAIGYQDGMVMAVRF 281

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                   R       + A  W   G  L F  ++ 
Sbjct: 282 SDNAEVLLRRPGAGP-VSALAWDKKGDRLAFGTEEG 316


>gi|255939806|ref|XP_002560672.1| Pc16g03030 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585295|emb|CAP92973.1| Pc16g03030 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 630

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 47/157 (29%), Gaps = 22/157 (14%)

Query: 265 FSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           FS  GK         E   +D+++ DL +    RLT+          SPD    V    R
Sbjct: 290 FSGRGKEVTYVGSSVESCNIDVFAADLTTGRVRRLTSDPEYVDPVDISPDDKWHVVLDTR 349

Query: 323 EGKEQLYVMQSNG----------SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               Q+++    G          +    +  +    +F P        +         + 
Sbjct: 350 GSGRQMFLAGMRGVPPIIDMAVITAVSSVRNNGARRFFQP-------WLLDHDGDRGDYN 402

Query: 373 IGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIF 406
              +   G      V D N  A   P WS  G  + +
Sbjct: 403 GQQVNAAGDGSPGSVNDPNWNAGADPKWSRDGTRIAY 439



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 54/170 (31%), Gaps = 9/170 (5%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N  ++  S   +     FS   ++V Y     E                +R+ +    +
Sbjct: 272 GNQLFINDSAISVGELRGFSGRGKEVTYVGSSVESCNIDVFAADLTTGRVRRLTSDPEYV 331

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE- 319
                S + K  ++   +     ++   ++      + +   I   +S   + ++  F+ 
Sbjct: 332 DPVDISPDDKWHVVLDTRGSGRQMFLAGMRG--VPPIIDMAVITAVSSVRNNGARRFFQP 389

Query: 320 --SDREGKEQLY---VMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAF 363
              D +G    Y    + + G        D   +   DP WS  G  IA+
Sbjct: 390 WLLDHDGDRGDYNGQQVNAAGDGSPGSVNDPNWNAGADPKWSRDGTRIAY 439


>gi|182701749|ref|ZP_02615018.2| hypothetical protein CBN_1831 [Clostridium botulinum NCTC 2916]
 gi|182668839|gb|EDT80817.1| hypothetical protein CBN_1831 [Clostridium botulinum NCTC 2916]
          Length = 1486

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 22/144 (15%)

Query: 304 NISASYSPDSSQI------VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           N + + S + S        V+  +   K  LY     G    +IS DK            
Sbjct: 345 NTAGNISNNGSAAMDLDFYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINVI----- 399

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           GD I ++ ++     I  MKKDG+++++L +D+         SG  + ++ + D     +
Sbjct: 400 GDWIYYSNYNDNG-KIYKMKKDGTKKQILCDDTATYITV---SGGVVYYANQSD---KGR 452

Query: 418 LYSIDLNGRNETLINTPAYASDPQ 441
           LY I+ +G     I+  A   DP 
Sbjct: 453 LYKINTDGT----IDGGASNRDPA 472



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 41/222 (18%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y  Y +          T   R   +I   ++  +       G     S   ++   IY 
Sbjct: 362 FYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINV----IGDWIYYS-NYNDNGKIYK 416

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +       + L      + +A+Y   S  +V+ +++  K +LY + ++G      + D  
Sbjct: 417 MKKDGTKKQIL-----CDDTATYITVSGGVVYYANQSDKGRLYKINTDG------TIDGG 465

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           AS  DP               G+   + VM  D        + +N         G  + +
Sbjct: 466 ASNRDPA--------------GKVHGMPVMD-DYGNYNKATDQANFINVV----GDWIYY 506

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT---PAYASDPQWVGF 445
           S   DG    K+Y+++ +G     +N            W  +
Sbjct: 507 SNFSDGH---KIYTVNKDGNIRRKVNDEWADGIQIVGAWAYY 545


>gi|168185062|ref|ZP_02619726.1| hypothetical protein CBB_2019 [Clostridium botulinum Bf]
 gi|182671891|gb|EDT83852.1| hypothetical protein CBB_2019 [Clostridium botulinum Bf]
          Length = 1482

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 22/144 (15%)

Query: 304 NISASYSPDSSQI------VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           N + + S + S        V+  +   K  LY     G    +IS DK            
Sbjct: 341 NTAGNISNNGSAAMDLDFYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINVI----- 395

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           GD I ++ ++     I  MKKDG+++++L +D+         SG  + ++ + D     +
Sbjct: 396 GDWIYYSNYNDNG-KIYKMKKDGTKKQILCDDTATYITV---SGGVVYYANQSD---KGR 448

Query: 418 LYSIDLNGRNETLINTPAYASDPQ 441
           LY I+ +G     I+  A   DP 
Sbjct: 449 LYKINTDGT----IDGGASNRDPA 468



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 41/222 (18%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y  Y +          T   R   +I   ++  +       G     S   ++   IY 
Sbjct: 358 FYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINV----IGDWIYYS-NYNDNGKIYK 412

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +       + L      + +A+Y   S  +V+ +++  K +LY + ++G      + D  
Sbjct: 413 MKKDGTKKQIL-----CDDTATYITVSGGVVYYANQSDKGRLYKINTDG------TIDGG 461

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           AS  DP               G+   + VM  D        + +N         G  + +
Sbjct: 462 ASNRDPA--------------GKVHGMPVMD-DYGNYNKATDQANFINVV----GDWIYY 502

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT---PAYASDPQWVGF 445
           S   DG    K+Y+++ +G     +N            W  +
Sbjct: 503 SNFSDGH---KIYTVNKDGNIRRKVNDEWADGIQIVGAWAYY 541


>gi|58427348|gb|AAW76385.1| peptidase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 803

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/332 (13%), Positives = 93/332 (28%), Gaps = 65/332 (19%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI-----------R 204
           H   D   Q+ +  +G    R   V          ++   +  DG N+           R
Sbjct: 174 HCAPDARPQAQSRPRGFGVVRDPLVPADTTPSRSPDARWEVLADGWNLMLRRVADGQVTR 233

Query: 205 YLTPSRDQILFE---PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---- 257
             +  R    F+     +SP+ Q++A          RV  ++       + + + +    
Sbjct: 234 LSSDGRADDYFDLESVAWSPDSQQLAVYRVRPGLARRVTRVEAAPAGGGQPVVHTQLYPK 293

Query: 258 -----------------------------SMILAP-RFSSNGKRALISVQKDEAMDIYSV 287
                                           L+P ++ S+G+       +     +  +
Sbjct: 294 PGDAVDVERPVLFALDGTRRDVETDMFDNPYSLSPLQWRSDGRSVAFEYVQRGFQRMRVI 353

Query: 288 --DLQSNATERLTNTLF---INISASYSPD----SSQIVFESDREGKEQLYVMQSNGSDQ 338
             D +S              +    S+  D      ++++ S+R+G   LY+        
Sbjct: 354 AVDARSGRAHVAVGEDARTFVYADRSFRHDVDGRGDEVLWISERDGWRHLYLFDGRNGQL 413

Query: 339 KRISQDKEASYFDPVWSPQG-DLIAFTKF------SGEKFAIGVMKKDGSQERLLVEDSN 391
           KR          D +        I FT              +  +  DG +   L     
Sbjct: 414 KRQLTRGPWVVRDVLRVDDMQRRIWFTASGMDAGKDPYYRQLYSVDFDGRRLVRLTHTDA 473

Query: 392 LQAPTWSPSGRSLI-FSRKKDGDTGSKLYSID 422
                 +  G+  +    + D     +L++ID
Sbjct: 474 DHDVAIADDGQHYVDVYSRPDLPPVMELHAID 505



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/250 (12%), Positives = 68/250 (27%), Gaps = 49/250 (19%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL----APRFSS 267
                P  SP+ +    A     D   + L      +  +   + R+       +  +S 
Sbjct: 199 PADTTPSRSPDARWEVLA-----DGWNLMLRRVADGQVTRLSSDGRADDYFDLESVAWSP 253

Query: 268 NGKRALISVQKDEAMDIYS----VDLQSNATERLTN-----TLFINISASYSPDSSQIVF 318
           + ++  +   +       +               T         +++             
Sbjct: 254 DSQQLAVYRVRPGLARRVTRVEAAPAGGGQPVVHTQLYPKPGDAVDVE------------ 301

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                 +  L+ +     D +    D   S     W   G  +AF         + V+  
Sbjct: 302 ------RPVLFALDGTRRDVETDMFDNPYSLSPLQWRSDGRSVAFEYVQRGFQRMRVIAV 355

Query: 379 D---GSQERLLVEDSNLQAP---TWSPS----GRSLIFSRKKDGDTGSKLYSIDL-NGRN 427
           D   G     + ED+        ++       G  +++  ++DG     LY  D  NG+ 
Sbjct: 356 DARSGRAHVAVGEDARTFVYADRSFRHDVDGRGDEVLWISERDG--WRHLYLFDGRNGQL 413

Query: 428 ETLINTPAYA 437
           +  +    + 
Sbjct: 414 KRQLTRGPWV 423


>gi|46199543|ref|YP_005210.1| acylamino-acid-releasing enzyme [Thermus thermophilus HB27]
 gi|46197169|gb|AAS81583.1| acylamino-acid-releasing enzyme [Thermus thermophilus HB27]
          Length = 618

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 32/198 (16%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R G  R     P F  +G+  L     +  + +Y+  L+      L +         Y+P
Sbjct: 136 RPGGPRRFQGWP-FKFDGRGLL----PEGNVALYA--LEEGKARLLLDRYPPPKEMVYAP 188

Query: 312 DSSQIVF----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
           +   +V      +  EG++ L++++    ++           F   WSP+G       F 
Sbjct: 189 EGLYLVMPEDARAQAEGRDTLFLLREGRLEKV---YGGVGPIFALEWSPEGLFFLGHAFE 245

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQA-------------PTWSPSGRSLIFSRKKDGD 413
            G      +    G + R+L+E S   +             P W   G  ++  R + G 
Sbjct: 246 RGGGTEARLYHLRGGEARVLLEGSLQNSLNSDLRYGQHLQGPRWGEDGVYVV--RTEAGR 303

Query: 414 TGSKLYSIDLNGRNETLI 431
             ++LY + L+G+ E L 
Sbjct: 304 --ARLYRVGLDGKAEALT 319


>gi|327405084|ref|YP_004345922.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327320592|gb|AEA45084.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 681

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/254 (14%), Positives = 69/254 (27%), Gaps = 26/254 (10%)

Query: 144 FFSSPASWRKIAHTISD----DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
           F++     + +   +S+      Y +   E   F+    F                M  D
Sbjct: 211 FYTRKQDVKNLGDLVSNVQEVYTYSNHMDEGISFDGGKAFPKPFNNGSFQSYGGATMSVD 270

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
             N   +  +  +     +   N    +            Y     ++  PK I      
Sbjct: 271 --NKEMIICACKRAEVNGQAYMNCDLYSTTYQKTGPNPSDYQWSELVNLGPK-INTPDGW 327

Query: 260 ILAPRFSSNGKRALISVQK----DEAMDIYSVDLQS--NATERL--TNTLFINISASYSP 311
              P  S++G     +  +    D  + +   +      +       NT   + S     
Sbjct: 328 EAQPSMSADGNTLFYTANRRTTKDNDVFVVKRNPDGTWGSPRPFDEINTAGKDKSPFLHQ 387

Query: 312 DSSQIVFES----DR---EGKEQLYVMQSNG--SDQKRISQDKEA--SYFDPVWSPQGDL 360
           DS  + F S    DR    G +  Y+ + NG  S  K I               S  G L
Sbjct: 388 DSETLYFVSTVSDDRKGAGGLDIFYMREENGVWSKPKNIGYPINTAEDEIGIFVSTDGKL 447

Query: 361 IAFTKFSGEKFAIG 374
             ++      + I 
Sbjct: 448 AYYSSQQQGNWDIY 461


>gi|242014252|ref|XP_002427805.1| WD-repeat protein, putative [Pediculus humanus corporis]
 gi|212512274|gb|EEB15067.1| WD-repeat protein, putative [Pediculus humanus corporis]
          Length = 592

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 59/178 (33%), Gaps = 13/178 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +       ++  RFSP+  K+A  + D   I+     ++      + +      +    
Sbjct: 269 QILNDHCDEVWFCRFSPDGLKLATGSKDTTVIIWDVDPESLQVTHRRTLEGHGYGVAYLA 328

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDR 322
           +S +    +    +D   +++  +++S+      +    +   S S+  D  + V    R
Sbjct: 329 WSPDSTHLIACGPED-CPELWIWNIESDELRVKVSHSPEDSLTSCSWHKDGKKFVTGGIR 387

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLI--AFTKFSGEKFAIGVMK 377
               Q Y     G+    I    E    + +W    G  +  A T      +   ++ 
Sbjct: 388 G---QFYQFDLEGN----ILDSWEGVRVNCLWCRSDGKTVLAADTHQRIRGYNFDMLS 438



 Score = 43.5 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 40/123 (32%), Gaps = 12/123 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLIAFTK 365
            +SPD  ++     ++    ++ +         +R  +          WSP    +    
Sbjct: 282 RFSPDGLKLA-TGSKDTTVIIWDVDPESLQVTHRRTLEGHGYGVAYLAWSPDSTHLIACG 340

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDS---NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  + +   +  + R+ V  S   +L + +W   G+  +      G    + Y  D
Sbjct: 341 PEDCP-ELWIWNIESDELRVKVSHSPEDSLTSCSWHKDGKKFV-----TGGIRGQFYQFD 394

Query: 423 LNG 425
           L G
Sbjct: 395 LEG 397


>gi|577284|dbj|BAA07702.1| Dipeptidyl peptidase IV [Elizabethkingia meningoseptica]
 gi|1098018|prf||2115194A dipeptidyl peptidase IV
          Length = 711

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 54/166 (32%), Gaps = 33/166 (19%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------SVQKDEA 281
           YAT +   I + Y   T         G+F+       FS++  + L+        +    
Sbjct: 51  YATIEPTGIAK-YSYKTSQKEKNIVDGSFQGYT----FSNDESKILLQKSSQSIYRHSFL 105

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
                 DL+S     L N  +I     +SPD S++ F +D      L+    N     +I
Sbjct: 106 GKFEVKDLKSRTVVSLNNANWIQ-EPKFSPDGSKVAFIAD----NNLFYQDLNTGKITQI 160

Query: 342 SQDK-----------------EASYFDPVWSPQGDLIAFTKFSGEK 370
           + D                          W+  GD + F +F   K
Sbjct: 161 TTDGKKNEIINGLGDWVYEEEFGHADYYQWNKAGDALVFVRFDERK 206



 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 34/112 (30%), Gaps = 21/112 (18%)

Query: 346 EASYFDPVWSPQGDLI--------AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           + S+    +S     I         +      KF   V          L   + +Q P +
Sbjct: 75  DGSFQGYTFSNDESKILLQKSSQSIYRHSFLGKFE--VKDLKSRTVVSLNNANWIQEPKF 132

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD-----PQWVG 444
           SP G  + F         + L+  DLN    T I T    ++       WV 
Sbjct: 133 SPDGSKVAFIAD------NNLFYQDLNTGKITQITTDGKKNEIINGLGDWVY 178


>gi|332300834|ref|YP_004442755.1| Dipeptidyl-peptidase IV [Porphyromonas asaccharolytica DSM 20707]
 gi|332177897|gb|AEE13587.1| Dipeptidyl-peptidase IV [Porphyromonas asaccharolytica DSM 20707]
          Length = 721

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 31/198 (15%)

Query: 160 DDIYQSITGE----KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           D +Y+         +    S  L    S  S +   S+ +   D     Y+         
Sbjct: 188 DWVYEEEFSTTRLMEWSPESDFLAFVRSDESQVKAYSMPIYGDDLYPTDYVYKYPKVGEQ 247

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               S     +     + + I RV L        P+ +       LA           ++
Sbjct: 248 NSTVS-----LHLYNLELKRIDRVELPLDADGYIPRIVFTGWGSDLA----------AVT 292

Query: 276 VQKDEA-MDIYSVDLQSNATE--------RLTNTLFINISASYSPDSSQIVFESDREGKE 326
           + + +  + +Y ++ +S            R  N  FIN S  + PD   IV  S+R+G  
Sbjct: 293 LNRLQNDLKVYRINPKSRTPRLTLREQDPRYINNEFIN-SMRFVPDG--IVMLSERDGST 349

Query: 327 QLYVMQSNGSDQKRISQD 344
           QLY   +NG+ Q+R++Q 
Sbjct: 350 QLYKYGTNGALQQRLTQG 367



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 73/278 (26%), Gaps = 63/278 (22%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--RSMILAPRFSSNGKRALISV 276
            +P+   +   T       R Y +        + +        I+ P FS +G+      
Sbjct: 97  IAPSGHHILIYTDIQPIYRRSYTLRATHYDVRRNLCEPLTEGEIMIPTFSPDGRMVAFVR 156

Query: 277 QKD------EAMDIYSVDLQSNATERL--TNTLFINISAS------YSPDSSQIVFESDR 322
             +      +      V       E +  T         S      +SP+S  + F    
Sbjct: 157 DNNIYIKKFDFNSEVQVTTDGKRNEVINGTTDWVYEEEFSTTRLMEWSPESDFLAFVRSD 216

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS----------------------PQGD- 359
           E + + Y M   G D        +        S                        G  
Sbjct: 217 ESQVKAYSMPIYGDDLYPTDYVYKYPKVGEQNSTVSLHLYNLELKRIDRVELPLDADGYI 276

Query: 360 -LIAFTKFSG-----------EKFAIGVMKKDGSQERLLVEDSN--------LQAPTWSP 399
             I FT +                 +  +       RL + + +        + +  + P
Sbjct: 277 PRIVFTGWGSDLAAVTLNRLQNDLKVYRINPKSRTPRLTLREQDPRYINNEFINSMRFVP 336

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            G  ++   ++DG T  +LY    NG  +  +    + 
Sbjct: 337 DG--IVMLSERDGST--QLYKYGTNGALQQRLTQGDWD 370



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 48/152 (31%), Gaps = 27/152 (17%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-------FDPVWSPQGDLI-A 362
           PD       SD    +++   +           D   +        +D   +P G  I  
Sbjct: 49  PDGKHYTLISD--DYQRIVKYEYATGRAVDTLFDIATARECDLKAIWDYDIAPSGHHILI 106

Query: 363 FTKFSGEKFAIGVMKKDGSQERL-----LVEDSNLQAPTWSPSGRSLIFSRKKD-----G 412
           +T           ++      R      L E   +  PT+SP GR + F R  +      
Sbjct: 107 YTDIQPIYRRSYTLRATHYDVRRNLCEPLTE-GEIMIPTFSPDGRMVAFVRDNNIYIKKF 165

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           D  S++  +  +G+   +IN         WV 
Sbjct: 166 DFNSEV-QVTTDGKRNEVINGTTD-----WVY 191


>gi|328774132|gb|EGF84169.1| hypothetical protein BATDEDRAFT_29274 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 838

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 63/169 (37%), Gaps = 20/169 (11%)

Query: 193 LCVMDRDG------ANIRYLTPSRD--QILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           L  +D DG         + +    +    +++  FSP+ + +A    +   I +      
Sbjct: 70  LITVDGDGRALLINFQRQVVLHHHNFKAAVYDLSFSPDGRFLAVTHENQIHIWKAPGFTL 129

Query: 245 RIDRAP--KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTN 299
                   + I     ++ A  +S++  R +IS  KD    I+ ++ +   +     LT 
Sbjct: 130 EFAPFVLHRVITGHYDLVTALSWSAD-SRFIISSSKDMTSRIHCMNAEEAFTGIV--LTG 186

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                I A +S     I F   R+G   L+    N    K +S++ + S
Sbjct: 187 HNDTVIGAWFSKSGKSI-FTVGRDGT--LFEWTRNSGSWK-LSENGDDS 231



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 54/161 (33%), Gaps = 14/161 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SPN   +     D   +L  +     +        NF++ +    FS +G+   ++ +
Sbjct: 62  ALSPNAALLITVDGDGRALLINFQRQVVLHHH-----NFKAAVYDLSFSPDGRFLAVTHE 116

Query: 278 KDEAMDIYSVDLQSNAT------ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
               + I+     +           +T    +  + S+S D S+ +  S ++   +++ M
Sbjct: 117 N--QIHIWKAPGFTLEFAPFVLHRVITGHYDLVTALSWSAD-SRFIISSSKDMTSRIHCM 173

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            +  +    +      +     +S  G  I      G  F 
Sbjct: 174 NAEEAFTGIVLTGHNDTVIGAWFSKSGKSIFTVGRDGTLFE 214



 Score = 36.9 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 82/230 (35%), Gaps = 24/230 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D  NI  L+ S+ +I      +   + +A+ +     +L V+   +      ++     
Sbjct: 292 PDFTNIHTLSISQKKINTI-AVNSTGEWLAFGSAKLGQLL-VWEWQSESYVLKQQGHQHD 349

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQI 316
              ++  +S +G+    +   D  + ++  + Q+       T      ++  ++    QI
Sbjct: 350 MNSIS--YSPDGQFIA-TGGDDGKVKLW--NTQTGFCFVTFTEHSGGIVALDFAKRG-QI 403

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           VF +  +G  + + +     + +  +  K   +     +  G+++     S + F I V 
Sbjct: 404 VFSASMDGTVRAFDL-VRYRNFRTFTSPKPVQFSSLAVNTSGEIV--CAGSSDSFEIYVW 460

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFS-----RKKDGDTGSKLYSI 421
                  RLL   S  + P       +L FS          D   +++ I
Sbjct: 461 SVQTG--RLLDILSGHEGPV-----SALAFSMDDVLASSSWDKTVRIWDI 503


>gi|313203479|ref|YP_004042136.1| 3-carboxymuconate cyclase-like protein [Paludibacter
           propionicigenes WB4]
 gi|312442795|gb|ADQ79151.1| 3-carboxymuconate cyclase-like protein [Paludibacter
           propionicigenes WB4]
          Length = 366

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 104/303 (34%), Gaps = 39/303 (12%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            V + G       F+ +D K  K      + +  A    IA T  D ++ +       ++
Sbjct: 77  SVSENGDASSANAFQ-FDSKTGKLTFLNTYLTKGADPCYIA-TTPDHVFTAN------YS 128

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
              + V      G + ++L ++   G ++       +  + +   SP+++   Y   +D 
Sbjct: 129 GGSVSVFGRKADGSLTDALQIIQHVGKSV-NAERQGEPHVHQIIVSPDKK---YTLVNDL 184

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAP-------RFSSNGKRALISVQKDEAMDIYSV 287
              +V +           +    ++ + P        F+ +GKR  +  + D  + +  +
Sbjct: 185 GTDKVTVYAYNPLAKTDILTPVDTLNVKPGSGPRHSVFTKDGKRLYLVHEIDGTVSVLGM 244

Query: 288 DLQSNATERL----------TNTLFINISASYSPDSSQIVFESDREGKEQL--YVMQSNG 335
             ++   + L          T     +I    SPD   + + ++R   + +  + + ++G
Sbjct: 245 --KNGKLKLLQETTLDRKAGTVNGAADI--HLSPDEKYL-YATNRGSADDITCFAVAADG 299

Query: 336 SDQ--KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             +  ++I    +    +   +P G  +     + +   I          R   +   + 
Sbjct: 300 KLRFKQQIPTGGKMP-RNFAITPDGQYVFVGHQTTDNIVIFKRNIQTGLLRNTRKQIKVG 358

Query: 394 APT 396
           +P 
Sbjct: 359 SPV 361


>gi|291190803|ref|NP_001167056.1| Periodic tryptophan protein 2 homolog [Salmo salar]
 gi|223647894|gb|ACN10705.1| Periodic tryptophan protein 2 homolog [Salmo salar]
          Length = 907

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/230 (12%), Positives = 72/230 (31%), Gaps = 20/230 (8%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             SG+ +  +     +    +      +       +SP+ Q +A       D  +V + +
Sbjct: 345 GCSGLGQLLVWEWQSESYVFKQQGHFNNMAAL--AYSPDGQYIA----TGGDDGKVKVWN 398

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTN 299
                         S +    F+S G   ++S   D  +  + +    + ++  + R T 
Sbjct: 399 MTSGLCFVTFTEHTSSVTNVTFTSRG-FVIVSASLDGTVRAFDLHRYRNFRTFTSPRPTQ 457

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              + +  S       +   +  +   ++++          +    E       +SP   
Sbjct: 458 FSSLAVDPS----GDLV--SAGAQDSFEVFIWSMQTGRLLEVLGGHEGPVSCLCFSPVQS 511

Query: 360 LIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           ++A   +        +M     ++   L  D    A ++ P G+ L  + 
Sbjct: 512 ILASASWDKTVRLWDMMDSWQTTETLRLTSDGL--AVSYRPDGQELAVAT 559



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 76/214 (35%), Gaps = 37/214 (17%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N+ +     DQ +     + +   + +       +L V+   +      ++ G+F +M 
Sbjct: 317 FNLIHSLSISDQRIATVSMNSSGDWIGFGCSGLGQLL-VWEWQSESYVFKQQ-GHFNNMA 374

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQ---------SNATERLTNTL--FINISASY 309
            A  +S +G+    +   D  + ++++            +++   +T T   F+ +SAS 
Sbjct: 375 -ALAYSPDGQYIA-TGGDDGKVKVWNMTSGLCFVTFTEHTSSVTNVTFTSRGFVIVSASL 432

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             D +   F+  R    + +            +  +   +      P GDL+  +  + +
Sbjct: 433 --DGTVRAFDLHRYRNFRTF------------TSPRPTQFSSLAVDPSGDLV--SAGAQD 476

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPT----WSP 399
            F + +        RLL      + P     +SP
Sbjct: 477 SFEVFIWSMQTG--RLLEVLGGHEGPVSCLCFSP 508


>gi|148379741|ref|YP_001254282.1| hypothetical protein CBO1781 [Clostridium botulinum A str. ATCC
           3502]
 gi|153932096|ref|YP_001384038.1| hypothetical protein CLB_1716 [Clostridium botulinum A str. ATCC
           19397]
 gi|153937080|ref|YP_001387580.1| hypothetical protein CLC_1724 [Clostridium botulinum A str. Hall]
 gi|148289225|emb|CAL83320.1| putative exported protein [Clostridium botulinum A str. ATCC 3502]
 gi|152928140|gb|ABS33640.1| hypothetical protein CLB_1716 [Clostridium botulinum A str. ATCC
           19397]
 gi|152932994|gb|ABS38493.1| hypothetical protein CLC_1724 [Clostridium botulinum A str. Hall]
          Length = 1485

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 22/144 (15%)

Query: 304 NISASYSPDSSQI------VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           N + + S + S        V+  +   K  LY     G    +IS DK            
Sbjct: 345 NTAGNISNNGSAAMDLDFYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINVI----- 399

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           GD I ++ ++     I  MKKDG+++++L +D+         SG  + ++ + D     +
Sbjct: 400 GDWIYYSNYNDNG-KIYKMKKDGTKKQILCDDTATYITV---SGGVVYYANQSD---KGR 452

Query: 418 LYSIDLNGRNETLINTPAYASDPQ 441
           LY I+ +G     I+  A   DP 
Sbjct: 453 LYKINTDGT----IDGGASNRDPA 472



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/222 (16%), Positives = 72/222 (32%), Gaps = 41/222 (18%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y  Y +          T   R   +I   ++  +       G     S   ++   IY 
Sbjct: 362 FYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINV----IGDWIYYS-NYNDNGKIYK 416

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +       + L      + +A+Y   S  +V+ +++  K +LY + ++G      + D  
Sbjct: 417 MKKDGTKKQIL-----CDDTATYITVSGGVVYYANQSDKGRLYKINTDG------TIDGG 465

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           AS  DP               G+   + VM  D        + +N         G  + +
Sbjct: 466 ASNRDPA--------------GKVHGMPVMD-DYGNYNKATDQANFINVV----GDWIYY 506

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT---PAYASDPQWVGF 445
           S   DG    K+Y+++ +G     +N            W  +
Sbjct: 507 SNFSDGH---KIYTVNKDGNIRRKVNDEWADGIQIVGAWAYY 545


>gi|134076655|emb|CAK45186.1| unnamed protein product [Aspergillus niger]
          Length = 311

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 55/152 (36%), Gaps = 12/152 (7%)

Query: 184 VVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V+      +  +D +G  IR Y T        +   S + + +A       +   VY+ 
Sbjct: 123 GVTQDGHIKVWDLDTNGEEIRDYETKGSFGTCID--LSADGRFIA----SGHENGSVYIF 176

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTL 301
            T   R P  +      + A  FS  GK         ++  I   D  S      L+   
Sbjct: 177 STESGRMPFSLSGLVKPVRAVAFSPGGKFLA---AAGDSKVIVLYDTSSGEQVASLSGHT 233

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              +S S+SP    ++  S  +GK +++ + +
Sbjct: 234 AWVMSLSWSPTGEYLLSGSF-DGKVKVWSIDT 264



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 57/175 (32%), Gaps = 24/175 (13%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY------S 310
            + + A   S +G+     V +D  + ++ +D                   S+      S
Sbjct: 106 PADVWAIALSEDGQYLA-GVTQDGHIKVWDLDTNGEEIR------DYETKGSFGTCIDLS 158

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D     F +       +Y+  +                    +SP G  +A    +G+ 
Sbjct: 159 ADGR---FIASGHENGSVYIFSTESGRMPFSLSGLVKPVRAVAFSPGGKFLA---AAGDS 212

Query: 371 FAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             I +      ++   L    + + + +WSP+G  L+       D   K++SID 
Sbjct: 213 KVIVLYDTSSGEQVASLSGHTAWVMSLSWSPTGEYLL---SGSFDGKVKVWSIDT 264



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 16/160 (10%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++    S + Q +A  T D    ++V+ +DT      +      S       S++G+   
Sbjct: 109 VWAIALSEDGQYLAGVTQD--GHIKVWDLDTN-GEEIRDYETKGSFGTCIDLSADGRFIA 165

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLY 329
                 E   +Y    +S    R+  +L   +      ++SP    +    D    + + 
Sbjct: 166 ---SGHENGSVYIFSTESG---RMPFSLSGLVKPVRAVAFSPGGKFLAAAGD---SKVIV 216

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +  ++  +Q        A      WSP G+ +    F G+
Sbjct: 217 LYDTSSGEQVASLSGHTAWVMSLSWSPTGEYLLSGSFDGK 256


>gi|66045730|ref|YP_235571.1| hypothetical protein Psyr_2494 [Pseudomonas syringae pv. syringae
           B728a]
 gi|63256437|gb|AAY37533.1| conserved hypothetical protein [Pseudomonas syringae pv. syringae
           B728a]
          Length = 377

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 67/179 (37%), Gaps = 23/179 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FSS+GK   +  +    +  ++++ ++ A ++ +    I    + +P  ++    +D +
Sbjct: 206 AFSSDGKFLYVVGEMSGTVTAFAINQKTGALKQTSQADGIPKRLNLAPGQARDARNNDLK 265

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
                 +  ++                    +P G  +  ++ +    ++  ++    + 
Sbjct: 266 DDPTPRIWAAD-----------------IRLAPNGKWLFISERTSSSVSVFKIEPASGKV 308

Query: 384 ----RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                  V++   +    SP+GR L+ S +K    GS  Y+I   G  + +   P+   
Sbjct: 309 AFVDNYPVQEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIGEKGALQRVSEAPSGKG 365


>gi|313887375|ref|ZP_07821065.1| peptidase, S9A/B/C family, catalytic domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923143|gb|EFR33962.1| peptidase, S9A/B/C family, catalytic domain protein [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 721

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 70/198 (35%), Gaps = 31/198 (15%)

Query: 160 DDIYQSITGE----KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           D +Y+         +    S  L    S  S +   S+ +   D     Y+         
Sbjct: 188 DWVYEEEFSTTRLMEWSPESDFLAFVRSDESQVKAYSMPIYGDDLYPTDYVYKYPKVGEQ 247

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
               S     +     + + I RV L        P+ +       LA           ++
Sbjct: 248 NSTVS-----LHLYNLELKRIDRVELPLDADGYIPRIVFTGWGSDLA----------AVT 292

Query: 276 VQKDEA-MDIYSVDLQSNATE--------RLTNTLFINISASYSPDSSQIVFESDREGKE 326
           + + +  + +Y ++ +S            R  N  FIN S  + PD   IV  S+R+G  
Sbjct: 293 LNRLQNDLKVYRINPKSRTPRLTLREQDPRYINNEFIN-SMRFVPDG--IVMLSERDGST 349

Query: 327 QLYVMQSNGSDQKRISQD 344
           QLY   +NG+ Q+R++Q 
Sbjct: 350 QLYKYGTNGALQQRLTQG 367



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 54/372 (14%), Positives = 96/372 (25%), Gaps = 87/372 (23%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHT--ISDDIYQSITGEKGDFNSRILFVSESV 184
           E  L +V        +   +   S     H   ISDD YQ I   +     R +     +
Sbjct: 25  EITLPEVTSG-AFAARGAGNGFRSLPDGKHYTLISDD-YQRIVKYE-YATGRAVDTLFDI 81

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                 +   + D D                    +P+   +   T       R Y M  
Sbjct: 82  AKARECDLQAIWDYD-------------------IAPSGHHILIYTDIKPIYRRSYTMRA 122

Query: 245 RIDRAPKRIGNF--RSMILAPRFSSNGKRALISVQKD------EAMDIYSVDLQSNATER 296
                 + +        I+ P FS +G+        +      +      V       E 
Sbjct: 123 THYDVRRNLCEPLTEGEIMIPTFSPDGRMVAFVRDNNIYIKKFDFNSEVQVTTDGKRNEV 182

Query: 297 L--TNTLFINISAS------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +  T         S      +SP+S  + F    E + + Y M   G D        +  
Sbjct: 183 INGTTDWVYEEEFSTTRLMEWSPESDFLAFVRSDESQVKAYSMPIYGDDLYPTDYVYKYP 242

Query: 349 YFDPVWS----------------------PQGD--LIAFTKFSG-----------EKFAI 373
                 S                        G    I FT +                 +
Sbjct: 243 KVGEQNSTVSLHLYNLELKRIDRVELPLDADGYIPRIVFTGWGSDLAAVTLNRLQNDLKV 302

Query: 374 GVMKKDGSQERLLVEDSN--------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             +       RL + + +        + +  + P G  ++   ++DG T  +LY    NG
Sbjct: 303 YRINPKSRTPRLTLREQDPRYINNEFINSMRFVPDG--IVMLSERDGST--QLYKYGTNG 358

Query: 426 RNETLINTPAYA 437
             +  +    + 
Sbjct: 359 ALQQRLTQGEWD 370



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 48/152 (31%), Gaps = 27/152 (17%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-------KEASYFDPVWSPQGDLI-A 362
           PD       SD    +++   +           D          + +D   +P G  I  
Sbjct: 49  PDGKHYTLISD--DYQRIVKYEYATGRAVDTLFDIAKARECDLQAIWDYDIAPSGHHILI 106

Query: 363 FTKFSGEKFAIGVMKKDGSQERL-----LVEDSNLQAPTWSPSGRSLIFSRKKD-----G 412
           +T           M+      R      L E   +  PT+SP GR + F R  +      
Sbjct: 107 YTDIKPIYRRSYTMRATHYDVRRNLCEPLTE-GEIMIPTFSPDGRMVAFVRDNNIYIKKF 165

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           D  S++  +  +G+   +IN         WV 
Sbjct: 166 DFNSEV-QVTTDGKRNEVINGTTD-----WVY 191


>gi|297592100|gb|ADI46885.1| UTP1f [Volvox carteri f. nagariensis]
          Length = 967

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 73/233 (31%), Gaps = 15/233 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +    +      +  Q L    FSP+   +A       +  +V +          
Sbjct: 392 QLLVWEWRSESYVLKQQAHQQDLTAAAFSPDGAMIA----TGGEDCKVKVFQQSTGFCFV 447

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYS 310
                 + + A  F  +G   L+S   D ++  + + ++      LT+ T     S +  
Sbjct: 448 TFSEHTAPVTAVTFLPSGA-VLLSASLDGSVRAWDL-VRYRNFRTLTSPTPAQYGSLAVD 505

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P    +V  +      Q+YV          +    E       +SP   L+A   +    
Sbjct: 506 PGGEVVV--AGAVDTFQIYVWSLRTGRLLDVLSGHEGPITGLAFSPVTSLLASASWDRTV 563

Query: 371 FAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               V    GS    +L    ++ A      GR L  +   DG     +Y  D
Sbjct: 564 RMWDVYDSGGSGSSDVLDHRHDVLAIAMRADGRQLA-AATADG----SIYLWD 611



 Score = 37.7 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 62/211 (29%), Gaps = 32/211 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +  L+ SR++I     F+     +A        +L   + + R +    +    +  +
Sbjct: 359 TRLHTLSISRERITSL-SFNHTGDWLAVGCARLGQLL---VWEWRSESYVLKQQAHQQDL 414

Query: 261 LAPRFSSNGKRALI--------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            A  FS +G               Q+       +    +     +T      +  S S D
Sbjct: 415 TAAAFSPDGAMIATGGEDCKVKVFQQSTGFCFVTFSEHTAPVTAVTFLPSGAVLLSASLD 474

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            S   ++  R                + ++    A Y      P G+++         F 
Sbjct: 475 GSVRAWDLVRYRNF------------RTLTSPTPAQYGSLAVDPGGEVVVAGAVD--TFQ 520

Query: 373 IGVMKKDGSQERLLVEDSNLQAP----TWSP 399
           I V        RLL   S  + P     +SP
Sbjct: 521 IYVWSLRTG--RLLDVLSGHEGPITGLAFSP 549


>gi|271962250|ref|YP_003336446.1| hypothetical protein Sros_0680 [Streptosporangium roseum DSM 43021]
 gi|270505425|gb|ACZ83703.1| hypothetical protein Sros_0680 [Streptosporangium roseum DSM 43021]
          Length = 332

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 63/194 (32%), Gaps = 22/194 (11%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+        +DD + L   + + +      ++    S      FS +GK  L     D
Sbjct: 141 SPDGSIAVVDYFDDGERLPSLVANLKTG----KVTKLPSKNNVLSFSPDGKHLLTGRFTD 196

Query: 280 EAMDIYSV-DLQS--NATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSNG 335
           + +  ++V D +    +++ +   +  N   + + D + +    +   GK +L     + 
Sbjct: 197 DNITEFAVFDAEGHETSSQVVPQIVSNNTPIALADDGTTVALVITGGSGKPRLRTYDLSS 256

Query: 336 ---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-----GVMKKDGSQERLL- 386
              SD   +   K+ S     W   G L  +T     +  +       +       R L 
Sbjct: 257 DTVSDAVPLGTPKDESAQRLHWDAAGTLTLWTSRGDGEGTVTSAVKRAVNAGTGTTRRLD 316

Query: 387 -----VEDSNLQAP 395
                 +      P
Sbjct: 317 SFKVRTDPWTWWLP 330


>gi|242826131|ref|XP_002488579.1| WD repeat-containing protein, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218712397|gb|EED11823.1| WD repeat-containing protein, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 601

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/196 (12%), Positives = 70/196 (35%), Gaps = 31/196 (15%)

Query: 108 AQVLVTGRVIKEGKDR---LRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           ++ +     ++ G  +   + +   L+D   ++ I+   + +  A  +  +         
Sbjct: 313 SEAVAMIDAVQSGDGKGIDVEISGFLYD--AKQFILKNTYIAGIAPLQLYS--------- 361

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI----RYLTPSRDQILFEPRFS 220
                 G   S +  +   + SG I   L ++ +   N+              +    FS
Sbjct: 362 -----SGLVFSPMQSIVRRIFSGSIPKHLHILPQV-ENLWSPGLQTLEGHSDSVRSVAFS 415

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + Q +A  + D      V L + +     + +    S + +  FS +G+    S   D+
Sbjct: 416 LDGQTLASGSDDK----TVKLWNIKTGSELQTLRGHSSSVHSVGFSPDGQTLA-SGSSDD 470

Query: 281 AMDIYSVDLQSNATER 296
            + ++  ++++ +  +
Sbjct: 471 TIKLW--NVKTGSELQ 484



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/135 (12%), Positives = 48/135 (35%), Gaps = 7/135 (5%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           FSP Q  V   ++    + +  +  ++       + +      + +  FS +G+    S 
Sbjct: 366 FSPMQSIVRRIFSGSIPKHLHILPQVENLWSPGLQTLEGHSDSVRSVAFSLDGQTLA-SG 424

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D+ + ++++    +  + L        S  +SPD   +   S     + + +      
Sbjct: 425 SDDKTVKLWNI-KTGSELQTLRGHSSSVHSVGFSPDGQTLASGSS---DDTIKLWNVKTG 480

Query: 337 DQKRISQDKEASYFD 351
            + +  +    S ++
Sbjct: 481 SELQTLRGHSYSIWN 495


>gi|84000167|ref|NP_001033186.1| WD repeat-containing protein 61 [Bos taurus]
 gi|110288018|sp|Q32LN7|WDR61_BOVIN RecName: Full=WD repeat-containing protein 61
 gi|81674723|gb|AAI09496.1| WD repeat domain 61 [Bos taurus]
 gi|296475406|gb|DAA17521.1| WD repeat-containing protein 61 [Bos taurus]
          Length = 305

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 113 AFSPDSQYLATGTHVGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 168 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 223

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 224 LAGTLSGHASWVLNVAFCPD 243



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 91/284 (32%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQI  K   + P     +A 
Sbjct: 57  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQI--KSIDAGPVDAWTLA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 114 -FSPDSQYLAT---GTHVGKVNI--FGVESGKKEYSL--------------DTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L+      ++ ++ PD +           + + V   
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTHF---VSSSSDKSVKVWDV 261

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I +  
Sbjct: 262 GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHIYD 302


>gi|325914361|ref|ZP_08176708.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           vesicatoria ATCC 35937]
 gi|325539369|gb|EGD11018.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           vesicatoria ATCC 35937]
          Length = 697

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 60/169 (35%), Gaps = 13/169 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLF---INISASYSPDSSQIVFE 319
             S +GK        D  ++++   + + +    +T        N   +Y PD   +++ 
Sbjct: 63  SISPDGKSLSWVAPLDGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYHPD--TLLYL 120

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIG 374
            D  G E   L+ +  +    K ++   + +      S   P+  ++       +   + 
Sbjct: 121 RDNGGDEDFHLFSVNLSDGSSKDLTPFPKTNAEVSGVSAHHPESIMVGMNDRDAKWHDLY 180

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSID 422
            +     + R LV+ +     ++   G   L ++ +   D G +L   D
Sbjct: 181 RVDLASGK-RTLVQKNTDSLDSYLLDGDYRLRYATRATDDAGRELLVPD 228



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 51/152 (33%), Gaps = 21/152 (13%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKF 366
           S SPD   + + +  +G   ++V   +  DQ R I++D      +  W+   D + + + 
Sbjct: 63  SISPDGKSLSWVAPLDGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYHPDTLLYLRD 122

Query: 367 SGEK--FAIGVMKKDGSQERLLV---------EDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           +G    F +  +       + L             +   P       S++          
Sbjct: 123 NGGDEDFHLFSVNLSDGSSKDLTPFPKTNAEVSGVSAHHP------ESIMVGMNDRDAKW 176

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
             LY +DL     TL+     + D      +D
Sbjct: 177 HDLYRVDLASGKRTLVQKNTDSLD---SYLLD 205



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDS----NLQAPTWSP 399
                 +   SP G  +++         + V   D   Q R + +D+         T+ P
Sbjct: 55  GNPERANVSISPDGKSLSWVAPLDGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYHP 114

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTP 434
              +L++ R   GD    L+S++L +G ++ L   P
Sbjct: 115 D--TLLYLRDNGGDEDFHLFSVNLSDGSSKDLTPFP 148


>gi|258647836|ref|ZP_05735305.1| dipeptidyl-peptidase IV [Prevotella tannerae ATCC 51259]
 gi|260851658|gb|EEX71527.1| dipeptidyl-peptidase IV [Prevotella tannerae ATCC 51259]
          Length = 734

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 64/366 (17%), Positives = 128/366 (34%), Gaps = 75/366 (20%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF---VSESV 184
           + ++D+++ K    +     P     + H   D    +       F  ++LF    S+  
Sbjct: 123 YYIFDIQNNK--FERLSDGGPQQ---VPHFSPDGTMVAFVRANNLFLVKLLFNNAESQVT 177

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G     L  +        ++            FS + + +A+  YD+  +  VY +  
Sbjct: 178 TDGKFNEVLNGI------PDWVNEEEFSTNCSFDFSADSKMLAWVRYDESKVP-VYSIQE 230

Query: 245 RIDRAP--KRIGNFRSM----------------------------ILAPRFSSNG----- 269
                P  K+   +                                +A    S+G     
Sbjct: 231 YKGAYPTLKQFDEYPGYYNYKYPVAGAKNADVCVKSFDIKAGVTRTMAVPLDSDGYIPRI 290

Query: 270 -------KRALISVQKD-EAMDIYSVDLQSNATE---RLTNTLFINISASYS-----PDS 313
                  K A++++ +  + MDIY V+ +S   +   R T+  ++ + A+Y+     P  
Sbjct: 291 CFTSDPEKLAVVTLNRHQDRMDIYMVNPRSTVAKLVLRETDKKYL-VEAAYNDLTFYP-- 347

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKF 371
            + V  S R G +QLY+   NG+  +R++           + P  +   +     S  + 
Sbjct: 348 GRFVLTSQRSGYKQLYLYDLNGTQLRRLTNGDYDVTTFYGYDPATERTYYQSAAESPLRR 407

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNGRNETL 430
           A+ V +K+G + R L       A T+S + +   F       T   + ++ D NG+  T 
Sbjct: 408 AVYVAEKNG-KTRRLSTQVGTNAATFSTNFKY--FLNVYSNLTTPPITTLCDANGKTLTT 464

Query: 431 INTPAY 436
           +   A 
Sbjct: 465 LVDNAE 470



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 63/183 (34%), Gaps = 39/183 (21%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESD--- 321
           S +G R +    K         D  +      LT           SPD+S+I+ +++   
Sbjct: 58  SDDGARIIRRSFKTGQEVGTLFDCNTARGPVTLTRIDGY----IMSPDASKILLQTETKM 113

Query: 322 ---REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
              R      Y+     +  +R+S         P +SP G ++AF + +     + ++K 
Sbjct: 114 IYRRSSTAVYYIFDIQNNKFERLSDGGPQQV--PHFSPDGTMVAFVRAN----NLFLVKL 167

Query: 379 --DGSQERLLVEDSNLQA----PTW--------------SPSGRSLIFSRKKDGDTGSKL 418
             + ++ ++  +    +     P W              S   + L + R  +      +
Sbjct: 168 LFNNAESQVTTDGKFNEVLNGIPDWVNEEEFSTNCSFDFSADSKMLAWVRYDESKVP--V 225

Query: 419 YSI 421
           YSI
Sbjct: 226 YSI 228



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 47/379 (12%), Positives = 102/379 (26%), Gaps = 94/379 (24%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF-------VSESVVSGIIKN 191
           +  +K  + P     + H      Y        D  +           +  S  +G    
Sbjct: 17  LSAQKPTTQPLRLEDVVHGAFAPNYIYGVRPAADGETYTQISDDGARIIRRSFKTGQEVG 76

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV-----AYATYDDEDILRVYLMDTRI 246
           +L   +   A         D  +     SP+  K+         Y        Y+ D + 
Sbjct: 77  TLFDCNT--ARGPVTLTRIDGYIM----SPDASKILLQTETKMIYRRSSTAVYYIFDIQN 130

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI- 305
           ++  +        +  P FS +G         +  +     +   +     T+  F  + 
Sbjct: 131 NKFERLSDGGPQQV--PHFSPDGTMVAFVRANNLFLVKLLFNNAESQVT--TDGKFNEVL 186

Query: 306 ----------------SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQD---K 345
                           S  +S DS  + +   D        + +  G+       D    
Sbjct: 187 NGIPDWVNEEEFSTNCSFDFSADSKMLAWVRYDESKVPVYSIQEYKGAYPTLKQFDEYPG 246

Query: 346 EASYFDPV-------------------------------------WSPQGDLIAFT--KF 366
             +Y  PV                                     ++   + +A      
Sbjct: 247 YYNYKYPVAGAKNADVCVKSFDIKAGVTRTMAVPLDSDGYIPRICFTSDPEKLAVVTLNR 306

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSN--------LQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             ++  I ++    +  +L++ +++            T+ P GR ++ + ++ G    +L
Sbjct: 307 HQDRMDIYMVNPRSTVAKLVLRETDKKYLVEAAYNDLTFYP-GRFVL-TSQRSG--YKQL 362

Query: 419 YSIDLNGRNETLINTPAYA 437
           Y  DLNG     +    Y 
Sbjct: 363 YLYDLNGTQLRRLTNGDYD 381



 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 50/143 (34%), Gaps = 18/143 (12%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYFDPVWSPQGDLIA------ 362
           S D ++I+  S + G+E   +   N +     +++         + SP    I       
Sbjct: 58  SDDGARIIRRSFKTGQEVGTLFDCNTARGPVTLTRIDGY-----IMSPDASKILLQTETK 112

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS-- 420
                       +     ++   L +    Q P +SP G  + F R  +      L++  
Sbjct: 113 MIYRRSSTAVYYIFDIQNNKFERLSDGGPQQVPHFSPDGTMVAFVRANNLFLVKLLFNNA 172

Query: 421 ---IDLNGR-NETLINTPAYASD 439
              +  +G+ NE L   P + ++
Sbjct: 173 ESQVTTDGKFNEVLNGIPDWVNE 195


>gi|303323569|ref|XP_003071776.1| prolyl dipeptidyl peptidase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240111478|gb|EER29631.1| prolyl dipeptidyl peptidase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 777

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 27/124 (21%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            +++         +  D+        WSP+G++IA+ + +     + + K    +   + 
Sbjct: 124 YHILDLESGSLTPLDNDQNGDIQYAAWSPKGNVIAYVRNN----NLYLWK--NGEVTQIT 177

Query: 388 EDSN----LQAPTW---------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           ED         P W               SP G  + + R    +TG   Y+I     N+
Sbjct: 178 EDGGPNTFNGVPDWVYEEEIFGTPFALWFSPDGEYVAYMRTD--ETGVPTYTIPYYMDNQ 235

Query: 429 TLIN 432
               
Sbjct: 236 KFAP 239



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 34/134 (25%), Gaps = 30/134 (22%)

Query: 221 PNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P+   V +AT     Y        +++D           +    I    +S  G      
Sbjct: 101 PDLSAVLWATNYKKQYRHSFFADYHILDLESGSLTPLDNDQNGDIQYAAWSPKGNVIAYV 160

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASY---------------SPDSSQIV 317
              +  +       ++    ++T     N       +               SPD   + 
Sbjct: 161 RNNNLYLW------KNGEVTQITEDGGPNTFNGVPDWVYEEEIFGTPFALWFSPDGEYVA 214

Query: 318 F-ESDREGKEQLYV 330
           +  +D  G     +
Sbjct: 215 YMRTDETGVPTYTI 228


>gi|119188789|ref|XP_001245001.1| hypothetical protein CIMG_04442 [Coccidioides immitis RS]
          Length = 777

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 27/124 (21%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            +++         +  D+        WSP+G++IA+ + +     + + K    +   + 
Sbjct: 124 YHILDLESGSLTPLDNDQNGDIQYAAWSPKGNVIAYVRNN----NLYLWK--NGEVTQIT 177

Query: 388 EDSN----LQAPTW---------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           ED         P W               SP G  + + R    +TG   Y+I     N+
Sbjct: 178 EDGGPNTFNGVPDWVYEEEIFGTPFALWFSPDGEYVAYMRTD--ETGVPTYTIPYYMDNQ 235

Query: 429 TLIN 432
               
Sbjct: 236 KFAP 239



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 34/134 (25%), Gaps = 30/134 (22%)

Query: 221 PNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P+   V +AT     Y        +++D           +    I    +S  G      
Sbjct: 101 PDLSAVLWATNYKKQYRHSFFADYHILDLESGSLTPLDNDQNGDIQYAAWSPKGNVIAYV 160

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASY---------------SPDSSQIV 317
              +  +       ++    ++T     N       +               SPD   + 
Sbjct: 161 RNNNLYLW------KNGEVTQITEDGGPNTFNGVPDWVYEEEIFGTPFALWFSPDGEYVA 214

Query: 318 F-ESDREGKEQLYV 330
           +  +D  G     +
Sbjct: 215 YMRTDETGVPTYTI 228


>gi|298241432|ref|ZP_06965239.1| hypothetical protein Krac_9794 [Ktedonobacter racemifer DSM 44963]
 gi|297554486|gb|EFH88350.1| hypothetical protein Krac_9794 [Ktedonobacter racemifer DSM 44963]
          Length = 445

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 50/304 (16%), Positives = 93/304 (30%), Gaps = 48/304 (15%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
             AHT +     +     G        VS   + G            G  I     + + 
Sbjct: 81  DFAHTPAARSVLAEQRPGGIIQDTPGAVSTVGIDG------------GTPIVVAFSNTNA 128

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----FRSMILAPRF--- 265
                 ++P+  ++        D  +       + +  +  G     F +    P F   
Sbjct: 129 RYSNATWNPSGNRLLLRQTSIGDTFQAGDATWWLTQNDQPGGIAAKIFPTSYAFPSFGYM 188

Query: 266 ----SSNGKRALISVQKDEAMDIYSVD-------LQSNATERLTNTLFINISASYSPD-S 313
               +    + L +            +       L +     L      + S  Y+   +
Sbjct: 189 NDLVAGIADKGLFTATLAGTQQRALTNQELTGHPLPAGLERVLWQPQHQDTSLLYAQSVA 248

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           SQ    S    + QL +    G  +   +     +     WSP G+ I +T  +G  F I
Sbjct: 249 SQPA-SSGHPTQVQLILRSLKGEQRVLAT----CACTQFAWSPDGNTIFYT--TGTSFTI 301

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
             + +   Q            P+WSP GR L+ +          L  +D+ + R +TL++
Sbjct: 302 LPLNQ---QHAFTFHADQESTPSWSPDGRFLLLNSPHS------LILVDVIHQRTQTLLS 352

Query: 433 TPAY 436
           +PA 
Sbjct: 353 SPAD 356


>gi|167381677|ref|XP_001735812.1| hypothetical protein [Entamoeba dispar SAW760]
 gi|165902029|gb|EDR27957.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
          Length = 370

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 76/263 (28%), Gaps = 36/263 (13%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           Q +T  +   N  IL+ S           + + D   AN  ++       +     S   
Sbjct: 139 QGVTSIRWSGNENILYTSSR------DRLINIYDMRQANPIHVLKGHSHWINSISTS--- 189

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
                     +        D  ID A KR+               G   L+S   D  + 
Sbjct: 190 ----TEYVLRQGGYDPLEKDKGIDGAKKRLNKIIGC--------GGGERLVSASDDGTLY 237

Query: 284 IYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++ + LQS     RL       +S  +SPDS  I         + + +            
Sbjct: 238 MW-MPLQSQKPIHRLVGHSSQVMSCKFSPDSRIIASTGC---DKNMRIWDGFTGSCLHTY 293

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPT--WS 398
           +    + +   WSP   ++             V+       +L+        +  +  WS
Sbjct: 294 RGHVQTIYGCAWSPDSRMLVSASKDSTVKLWNVVP---GCRKLMTNLPGHLDEVFSIDWS 350

Query: 399 PSGRSLIFSRKKDGDTGSKLYSI 421
             G S+  +     D   K++  
Sbjct: 351 LDGSSVATASY---DHTIKIWRY 370



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 45/129 (34%), Gaps = 9/129 (6%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I++ +       + +    S  + S     ++ + D    +  +      Q ++   +SP
Sbjct: 248 IHRLVGHSSQVMSCKFSPDSRIIASTGCDKNMRIWDGFTGSCLHTYRGHVQTIYGCAWSP 307

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQK 278
           + + +  A+ D      V L +  +    K + N       + +  +S +G     +   
Sbjct: 308 DSRMLVSASKDS----TVKLWNV-VPGCRKLMTNLPGHLDEVFSIDWSLDGSSVA-TASY 361

Query: 279 DEAMDIYSV 287
           D  + I+  
Sbjct: 362 DHTIKIWRY 370


>gi|123419196|ref|XP_001305498.1| Transcriptional repressor tup12-related protein [Trichomonas
           vaginalis G3]
 gi|121887021|gb|EAX92568.1| Transcriptional repressor tup12-related protein [Trichomonas
           vaginalis G3]
          Length = 428

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 40/111 (36%), Gaps = 11/111 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSN-----GSDQKRISQDKEASYFDP-VWSPQGDLI 361
           +YS D     F       + L++M S+     G+    I   K   Y    V+SP    I
Sbjct: 138 NYSSDGRLFAFA----DAKTLFIMNSSDGSLVGTGSIPIVDGKNEQYVRVLVFSPDSKYI 193

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           A    + + +   V         L    + + +  +SP  + L +S   DG
Sbjct: 194 ALAGKNNDIYVFSVANPQSEMRALKNHTNTVSSLAFSPDSKKL-YSGSYDG 243



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 64/183 (34%), Gaps = 10/183 (5%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIGNFRSMILAPRFSS 267
           S + ++    +S + +  A+A      I+             P   G     +    FS 
Sbjct: 129 SSNTVICAVNYSSDGRLFAFADAKTLFIMNSSDGSLVGTGSIPIVDGKNEQYVRVLVFSP 188

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           + K   ++ + ++       + QS     L N      S ++SPDS ++ +    +G   
Sbjct: 189 DSKYIALAGKNNDIYVFSVANPQS-EMRALKNHTNTVSSLAFSPDSKKL-YSGSYDG--M 244

Query: 328 LYVMQSNG----SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           + +  ++       + ++ Q+K+        S  G  IA   F     A+   + D    
Sbjct: 245 ICMWDTSTFTVIKTKSQLCQNKDEYMVTFALSHDGSFIA-VGFMKGNVALYSAQLDDKAP 303

Query: 384 RLL 386
            ++
Sbjct: 304 MII 306


>gi|119962342|ref|YP_948192.1| hypothetical protein AAur_2466 [Arthrobacter aurescens TC1]
 gi|119949201|gb|ABM08112.1| conserved hypothetical protein [Arthrobacter aurescens TC1]
          Length = 342

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 52/152 (34%), Gaps = 17/152 (11%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D+ ++   F+P Q  V YAT          +   R   + K +      +  P  S +G 
Sbjct: 198 DRNIWGVTFAPGQSDVFYATAASSGR----IWLVRGSLSAKTLTAIHDNVECPSISPDGT 253

Query: 271 RALISVQKDEA----MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EG 324
           R         A     ++  ++L +     L     ++    +  + + +   +D   +G
Sbjct: 254 RIAFKKNDGGALAAHWNVAVLELATGRETVLAENRSVDDQIEWLDNQNVLYGLADETIDG 313

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
              ++ + ++   Q  +       +    WSP
Sbjct: 314 DSNIWKLATDPDSQPSL-------FIAHAWSP 338



 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 72/223 (32%), Gaps = 42/223 (18%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDE----------AMDIYSVDLQSNAT------ 294
           +R      +    R S +G     +V              A +I   +  S         
Sbjct: 129 QRAWPVPGIPSRTRISPDGSMIATTVFVSGHSYATAGFSTATEISLPEGTSGNLEDFALM 188

Query: 295 ---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              ERL  T       +++P     VF +      ++++++      K ++   + +   
Sbjct: 189 VNGERLLATDRNIWGVTFAP-GQSDVFYATAASSGRIWLVR-GSLSAKTLTAIHD-NVEC 245

Query: 352 PVWSPQGDLIAFTKFSGE----KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           P  SP G  IAF K  G      + + V++    +E +L E+ ++           + + 
Sbjct: 246 PSISPDGTRIAFKKNDGGALAAHWNVAVLELATGRETVLAENRSVDD--------QIEWL 297

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDP------QWVG 444
             ++   G    +ID +     L   P   S P       W  
Sbjct: 298 DNQNVLYGLADETIDGDSNIWKLATDP--DSQPSLFIAHAWSP 338


>gi|55981574|ref|YP_144871.1| acylamino-acid-releasing protein [Thermus thermophilus HB8]
 gi|55772987|dbj|BAD71428.1| probable acylamino-acid-releasing enzyme [Thermus thermophilus HB8]
          Length = 618

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 32/198 (16%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R G  R     P F  +G+  L     +  + +Y+  L+      L +         Y+P
Sbjct: 136 RPGGPRRFQGWP-FKFDGRGLL----PEGNVALYA--LEEGKVRLLLDRYPPPKEMVYAP 188

Query: 312 DSSQIVF----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF- 366
           +   +V      +  EG++ L++++    ++           F   WSP+G       F 
Sbjct: 189 EGLYLVMPEDARAQAEGRDTLFLLREGRLEKV---YGGVGPIFALEWSPEGLFFLGHAFE 245

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQA-------------PTWSPSGRSLIFSRKKDGD 413
            G      +    G + R+L+E S   +             P W   G  ++  R + G 
Sbjct: 246 RGGGTEARLYHLRGGEARVLLEGSLQNSLNSDLRYGQHPQGPRWGEDGVYVV--RTEAGR 303

Query: 414 TGSKLYSIDLNGRNETLI 431
             ++LY + L+G+ E L 
Sbjct: 304 --ARLYRVGLDGKAEALT 319


>gi|313239725|emb|CBY14612.1| unnamed protein product [Oikopleura dioica]
          Length = 317

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 62/202 (30%), Gaps = 14/202 (6%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +         + +   S + Q     ++D      + L D       +R       +L+
Sbjct: 55  PKRRMQGHSHFVSDVEVSSDGQYALSGSWDA----TLRLWDLASGNTVRRFVGHTKDVLS 110

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVF 318
             FS + ++ L S  +D  + ++     +    + T     +        +SP     V 
Sbjct: 111 VSFSPDNRQIL-SAARDRTIKLW----NTVGVCKFTIQENCHTEWVSCVRFSPLPQTPVI 165

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     + + V        KR  +           SP G L A     G+     +  +
Sbjct: 166 VS-AGWDKLVKVWNLTNCKLKRDYRGHTGYLNTVNVSPDGSLCASGGRDGQAKLWDIGSE 224

Query: 379 DGSQERLLVEDSNLQAPTWSPS 400
           +      L     + A T+SP+
Sbjct: 225 EAKPLHTLEAGDEIYALTFSPN 246



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 90/247 (36%), Gaps = 22/247 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    +L + D    N         + +    FSP+ +++  A     D          
Sbjct: 80  SGSWDATLRLWDLASGNTVRRFVGHTKDVLSVSFSPDNRQILSAA---RDRTIKLWNTVG 136

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
           + +   +       +   RFS   +   ++S   D+ + ++  +L +   +R        
Sbjct: 137 VCKFTIQENCHTEWVSCVRFSPLPQTPVIVSAGWDKLVKVW--NLTNCKLKRDYRGHTGY 194

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIA 362
             + + SPD S       R+G+ +L+       + K + + +     +   +SP    + 
Sbjct: 195 LNTVNVSPDGSLCA-SGGRDGQAKLW--DIGSEEAKPLHTLEAGDEIYALTFSPNRYWL- 250

Query: 363 FTKFSGEKFAIGVMK----KDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGS 416
               +G    I  ++     D  +  ++ +    +  +  WS  G++L FS   DG    
Sbjct: 251 -CAAAGGIIKIWDLEQKNLVDELKPEVVADGGRAECISLCWSSDGQTL-FSGYNDGQ--I 306

Query: 417 KLYSIDL 423
           +++S+ +
Sbjct: 307 RVWSMSI 313



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 87/264 (32%), Gaps = 38/264 (14%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                   RLWD+     +            R + HT   D+           ++R +  
Sbjct: 80  SGSWDATLRLWDLASGNTV-----------RRFVGHT--KDVLSVSFSP----DNRQILS 122

Query: 181 SESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +    +  + N++ V       N         + +   RFSP  Q     +   + +++V
Sbjct: 123 AARDRTIKLWNTVGVCKFTIQENCHT------EWVSCVRFSPLPQTPVIVSAGWDKLVKV 176

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-T 298
           +  +    +  +        +     S +G     S  +D    ++  D+ S   + L T
Sbjct: 177 W--NLTNCKLKRDYRGHTGYLNTVNVSPDGSLCA-SGGRDGQAKLW--DIGSEEAKPLHT 231

Query: 299 NTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQ----SNGSDQKRISQDKEASYFDPV 353
                 I A ++SP+  +    +   G  +++ ++     +    + ++    A      
Sbjct: 232 LEAGDEIYALTFSPN--RYWLCAAAGGIIKIWDLEQKNLVDELKPEVVADGGRAECISLC 289

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMK 377
           WS  G  + F+ ++  +  +  M 
Sbjct: 290 WSSDGQTL-FSGYNDGQIRVWSMS 312


>gi|302325902|gb|ADL25103.1| conserved domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 883

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 96/302 (31%), Gaps = 75/302 (24%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            S D+ + +    G ++S++ F         +  +L  +D DG +   +       +F P
Sbjct: 284 FSSDVREKV----GTYHSKLAF------RNNVTGNLVYIDYDGRSPGAIEIFDTVQVFHP 333

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRF--SSNG-KRA 272
             SP+  KVA+ T  +       VY+ +   +       +    ++ PR+  S  G    
Sbjct: 334 DISPDGSKVAFCTGMEGVDGPSSVYVRNLDANGGGLVKLDVEKAVI-PRWHVSEGGDTSI 392

Query: 273 LISVQKD-----------EAMDIYSVDLQSNATERLTNTL-------------------- 301
           +                     +   + +    ++L +                      
Sbjct: 393 VFVDDASDNSDDAEFLARGTWIVPFSNGKFGQAKKLMDGAYHSGVSQSLNRAVSGARRLR 452

Query: 302 ---------FINIS----ASYSPDS------------SQIVFESDREG-KEQLYVMQSNG 335
                    + N      AS S D             +   F SD+ G  E+L V  S+G
Sbjct: 453 VHVNGKDDVWYNGEQACNASLSKDGLNQTLFLDFGGSTGRAFASDKYGVHERLLVADSSG 512

Query: 336 SDQKRISQDKEASYFDPVWSPQGDL--IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
              + I   K  S+    W  + +L  ++     GE   + ++    S    LVE  +L 
Sbjct: 513 KMVRAIPAPKGFSFDHSEWVNRDNLAVVSLVNVQGEHAKLALVNVLDSSVTELVEGGDLW 572

Query: 394 AP 395
            P
Sbjct: 573 HP 574


>gi|261415610|ref|YP_003249293.1| hypothetical protein Fisuc_1208 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372066|gb|ACX74811.1| hypothetical protein Fisuc_1208 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 883

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/302 (16%), Positives = 96/302 (31%), Gaps = 75/302 (24%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            S D+ + +    G ++S++ F         +  +L  +D DG +   +       +F P
Sbjct: 284 FSSDVREKV----GTYHSKLAF------RNNVTGNLVYIDYDGRSPGAIEIFDTVQVFHP 333

Query: 218 RFSPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFRSMILAPRF--SSNG-KRA 272
             SP+  KVA+ T  +       VY+ +   +       +    ++ PR+  S  G    
Sbjct: 334 DISPDGSKVAFCTGMEGVDGPSSVYVRNLDANGGGLVKLDVEKAVI-PRWHVSEGGDTSI 392

Query: 273 LISVQKD-----------EAMDIYSVDLQSNATERLTNTL-------------------- 301
           +                     +   + +    ++L +                      
Sbjct: 393 VFVDDASDNSDDAEFLARGTWIVPFSNGKFGQAKKLMDGAYHSGVSQSLNRAVSGARRLR 452

Query: 302 ---------FINIS----ASYSPDS------------SQIVFESDREG-KEQLYVMQSNG 335
                    + N      AS S D             +   F SD+ G  E+L V  S+G
Sbjct: 453 VHVNGKDDVWYNGEQACNASLSKDGLNQTLFLDFGGSTGRAFASDKYGVHERLLVADSSG 512

Query: 336 SDQKRISQDKEASYFDPVWSPQGDL--IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
              + I   K  S+    W  + +L  ++     GE   + ++    S    LVE  +L 
Sbjct: 513 KMVRAIPAPKGFSFDHSEWVNRDNLAVVSLVNVQGEHAKLALVNVLDSSVTELVEGGDLW 572

Query: 394 AP 395
            P
Sbjct: 573 HP 574


>gi|126654538|ref|XP_001388439.1| RIKEN cDNA 9430077D24 gene [Cryptosporidium parvum Iowa II]
 gi|126117379|gb|EAZ51479.1| RIKEN cDNA 9430077D24 gene, putative [Cryptosporidium parvum Iowa
           II]
          Length = 316

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 93/262 (35%), Gaps = 21/262 (8%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +L V      +I  +  SR   +   +F+ + ++   A+   +    + L D + +R  +
Sbjct: 49  TLRVYTISSGDIFRIHHSRKNSMDAIKFAHSNKQCLVASNKTDGDATIRLWDIQENRYIR 108

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                           N K   I    D  + IY+  L++    + T         ++ P
Sbjct: 109 ATKLSSGPYNGISVHPN-KDLFIVSTNDSKVSIYNFKLETPLAVQSTKNKTPIS--AFDP 165

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-----KEASYFDPV-WSPQGDLIAFTK 365
           +       +D    + +  M  + +     + +      + +Y D + +SP G LI    
Sbjct: 166 EGRTFAVATD----DHIITMYDSKTYSPFDTFNLSSHIGKKNYIDHITFSPDGRLILVKT 221

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             G+ F I   + +  QE   V  S  +   P +S   + +I      G   S + SI  
Sbjct: 222 NLGKIFTISSFRGELFQEYKTVNKSPKSETRPVFSSDSQYVI-----HGLQDSTI-SIWS 275

Query: 424 NGRNETLINTPAYASDPQWVGF 445
               + ++N   +   P+ + F
Sbjct: 276 TTTAKHIVNLTGHVGQPKCIAF 297


>gi|123484671|ref|XP_001324315.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121907196|gb|EAY12092.1| conserved hypothetical protein [Trichomonas vaginalis G3]
          Length = 576

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 3/109 (2%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DL 289
           +  +D++RV+                R  ++   FS +G+   IS  +D  + I++V   
Sbjct: 450 HTHDDVIRVFDTKAMTTTTRYIGAKCRRYLIRSTFSPDGQFI-ISGSEDGNILIWTVKSP 508

Query: 290 QSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +S+ T + TN       S +++P  + I   S  EG+  L  +  + S+
Sbjct: 509 KSSNTVQWTNKFNKPVTSLAWNPKRNMIAISSFGEGQPILIFVDPDESE 557



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 79/240 (32%), Gaps = 18/240 (7%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V   +G +   + P   + ++  +F P    + +    D     +Y+ D    +  K+  
Sbjct: 323 VWTVEGPHKPLIMP-HSKFVYTGKFHPIDNNLIFTAGYDG---IIYVWDYNQKKCFKQFI 378

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDS 313
             ++ I +  FS NG+R          + ++   +++   +  +N  F ++     +P S
Sbjct: 379 GHKTRINSMTFSPNGRRL-YCGDSSGVISVWRTVIENGELK-FSNKRFLVDDEIGNTPIS 436

Query: 314 SQIVFESD-----REGKEQLYVMQSN--GSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              +  S+         + + V  +    +  + I            +SP G  I     
Sbjct: 437 HMEMVRSNFCLLIHTHDDVIRVFDTKAMTTTTRYIGAKCRRYLIRSTFSPDGQFIISGSE 496

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            G      V     S         N  + +  W+P    +  S    G+    L  +D +
Sbjct: 497 DGNILIWTVKSPKSSNTVQWTNKFNKPVTSLAWNPKRNMIAISSF--GEGQPILIFVDPD 554


>gi|17512469|gb|AAH19190.1| Fibroblast activation protein [Mus musculus]
          Length = 761

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 49/160 (30%), Gaps = 34/160 (21%)

Query: 310 SPDSSQIVFESDREGKEQL------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD   +  ESD     +       Y+      +  R   +         WSP G  +A+
Sbjct: 106 SPDRQFVYLESDYSKLWRYSYTATYYIYDLQNGEFVR-GYELPRPIQYLCWSPVGSKLAY 164

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--------------------APTWSPSGRS 403
              +     I + ++ G     +                           A  WSP G+ 
Sbjct: 165 VYQN----NIYLKQRPGDPPFQITYTGRENRIFNGIPDWVYEEEMLATKYALWWSPDGKF 220

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTP---AYASDP 440
           L +    D D     YS   +G+    IN P   A A +P
Sbjct: 221 LAYVEFNDSDIPIIAYSYYGDGQYPRTINIPYPKAGAKNP 260


>gi|148232415|ref|NP_001080675.1| notchless homolog 1 [Xenopus laevis]
 gi|3687833|gb|AAC62236.1| notchless [Xenopus laevis]
          Length = 476

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 61/178 (34%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T+      
Sbjct: 94  VTRCTSSLEGHTEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTSKGHTHW 149

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQ--KRISQDKEASYFDP----VWS 355
            +S ++SPD  ++       G    Q+++   +   Q  K ++   +   +        +
Sbjct: 150 VLSIAWSPDGKKLA-----SGCKNSQIFIWDPSTGKQIGKPLTGHSKWITWLCWEPLHLN 204

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A          I +      Q +  L     ++ A  W   G  L++S  +D
Sbjct: 205 PESRYLASASKDCT---IRIWDTVMGQCQKILTSHTQSVTAVKWGGDG--LLYSSSQD 257



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 46/139 (33%), Gaps = 8/139 (5%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + +++   +    +R+T    +     +SPD+  I   S     + +
Sbjct: 331 GPERLVSGSDDFTLFLWAPAEEKKPLQRMTGHQALINEVLFSPDTRIIASASF---DKSI 387

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   ++ +   WS    L+           + V      +  + + 
Sbjct: 388 KLWDGKTGKFLTSLRGHVSAVYQIAWSADSRLLVSGSSDST---LKVWDSKTKKLLIDLP 444

Query: 389 DSNLQAPT--WSPSGRSLI 405
               +  +  WSP G+ + 
Sbjct: 445 GHADEVYSVDWSPDGQRVA 463



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 68/207 (32%), Gaps = 44/207 (21%)

Query: 75  RSDVFNLISQDSFKQKITNPDSI------PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           R+  FN        Q ++    +       R+ +    G + LV+G              
Sbjct: 293 RTGAFNPADASVNPQDMSGSLEVLKEKALKRYNEVRGQGPERLVSGS--------DDFTL 344

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            LW   + K+ +           R   H     I + +       ++RI+       S  
Sbjct: 345 FLWAPAEEKKPL----------QRMTGHQA--LINEVLFSP----DTRII------ASAS 382

Query: 189 IKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              S+ +   DG   ++LT        +++  +S + + +   + D      + + D++ 
Sbjct: 383 FDKSIKLW--DGKTGKFLTSLRGHVSAVYQIAWSADSRLLVSGSSDS----TLKVWDSKT 436

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +    +      + +  +S +G+R  
Sbjct: 437 KKLLIDLPGHADEVYSVDWSPDGQRVA 463



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 51/158 (32%), Gaps = 22/158 (13%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            A  R T++L  +  A    ++SP    +   S   G   +     +       S+    
Sbjct: 92  RAVTRCTSSLEGHTEAVISVAFSPTGKYLASGS---GDTTVRFWDLSTETPHFTSKGHTH 148

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS--------P 399
                 WSP G  +A      +   I +      ++       + +  TW         P
Sbjct: 149 WVLSIAWSPDGKKLA---SGCKNSQIFIWDPSTGKQIGKPLTGHSKWITWLCWEPLHLNP 205

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             R L  + K   D   +++   + G+ + ++ +   +
Sbjct: 206 ESRYLASASK---DCTIRIWDT-VMGQCQKILTSHTQS 239



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 49/353 (13%), Positives = 97/353 (27%), Gaps = 111/353 (31%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------------------ 227
           SG    ++   D       + +      +    +SP+ +K+A                  
Sbjct: 122 SGSGDTTVRFWDLSTETPHFTSKGHTHWVLSIAWSPDGKKLASGCKNSQIFIWDPSTGKQ 181

Query: 228 ---------------------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                                      Y     +D   + + DT + +  K + +    +
Sbjct: 182 IGKPLTGHSKWITWLCWEPLHLNPESRYLASASKDC-TIRIWDTVMGQCQKILTSHTQSV 240

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-------------------LTNTL 301
            A ++  +G   L S  +D  +  +    Q     R                   L    
Sbjct: 241 TAVKWGGDG--LLYSSSQDRTIKAWR--AQDGVLCRTLQGHAHWVNTMALSTDYVLRTGA 296

Query: 302 FINISASYSP---DSSQIV--------FESDREGKEQ------------LYVMQSNGSDQ 338
           F    AS +P     S  V        +   R    +            L+         
Sbjct: 297 FNPADASVNPQDMSGSLEVLKEKALKRYNEVRGQGPERLVSGSDDFTLFLWAPAEEKKPL 356

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--- 395
           +R++   +A   + ++SP   +IA   F  +   +     DG   + L       +    
Sbjct: 357 QRMT-GHQALINEVLFSPDTRIIASASFD-KSIKLW----DGKTGKFLTSLRGHVSAVYQ 410

Query: 396 -TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVG 444
             WS   R L+       D+  K++    +   + LI+ P +A +     W  
Sbjct: 411 IAWSADSRLLV---SGSSDSTLKVWD---SKTKKLLIDLPGHADEVYSVDWSP 457


>gi|301775272|ref|XP_002923047.1| PREDICTED: WD repeat-containing protein 61-like [Ailuropoda
           melanoleuca]
          Length = 305

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 113 AFSPDSQYLATGTHVGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 168 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 223

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 224 LAGTLSGHASWVLNVAFCPD 243



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 91/284 (32%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQI  K   + P     +A 
Sbjct: 57  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQI--KSIDAGPVDAWTLA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 114 -FSPDSQYLAT---GTHVGKVNI--FGVESGKKEYSL--------------DTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L+      ++ ++ PD +           + + V   
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTHF---VSSSSDKSVKVWDV 261

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I V  
Sbjct: 262 GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHVYD 302


>gi|302768339|ref|XP_002967589.1| hypothetical protein SELMODRAFT_440044 [Selaginella moellendorffii]
 gi|300164327|gb|EFJ30936.1| hypothetical protein SELMODRAFT_440044 [Selaginella moellendorffii]
          Length = 460

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 9/189 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+ +   Y          V            +I    + I   R+S + +  L +   
Sbjct: 55  WAPDSE---YVLCALFKRAMVQAWSVSQPEWTCKIDEGPAGIAHARWSPDSRHILTTSDF 111

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++S+   +    +        +S  ++ D   +   + R+ K+ ++++ SN  + 
Sbjct: 112 QLRLTVWSLVSTACVHVQWPKHAARGVS--FTQDGKFVAIATRRDCKDYVHLLASNSWEG 169

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAP 395
                       D  WSP  + IA    S  ++ + V   DG    + +       ++  
Sbjct: 170 MGTFAVDTVDLADLEWSPNDNTIA-VWDSSLEYKVLVYSPDGRCLFKYQAYENALGVRTV 228

Query: 396 TWSPSGRSL 404
            WSP G  L
Sbjct: 229 AWSPCGEFL 237



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 82/233 (35%), Gaps = 25/233 (10%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +   R+SP+ + +   +      LR+ +           +   +       F+ +GK   
Sbjct: 93  IAHARWSPDSRHILTTSDFQ---LRLTVWSLVSTACVH-VQWPKHAARGVSFTQDGKFVA 148

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDREGKEQLY 329
           I+ ++D    ++   L SN+ E +  T  ++        +SP+ + I    D   + ++ 
Sbjct: 149 IATRRDCKDYVHL--LASNSWEGM-GTFAVDTVDLADLEWSPNDNTIA-VWDSSLEYKVL 204

Query: 330 VMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLL 386
           V   +G    K  + +         WSP G+ +    +      I  +            
Sbjct: 205 VYSPDGRCLFKYQAYENALGVRTVAWSPCGEFLGVGSYD----QIARVLNHLTWKPVAEF 260

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
              S+++ P       +++F   ++    S LY  D +  NE   N  +  S 
Sbjct: 261 THTSSVKGPA-----TAVVFKEIEEPFDMSSLYLTD-DRENEIFQNENSGDSH 307


>gi|297592161|gb|ADI46945.1| UTP1m [Volvox carteri f. nagariensis]
          Length = 967

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 73/233 (31%), Gaps = 15/233 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +    +      +  Q L    FSP+   +A       +  +V +          
Sbjct: 392 QLLVWEWRSESYVLKQQAHQQDLTAAAFSPDGAMIA----TGGEDCKVKVFQQSTGFCFV 447

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYS 310
                 + + A  F  +G   L+S   D ++  + + ++      LT+ T     S +  
Sbjct: 448 TFSEHTAPVTAVTFLPSGA-VLLSASLDGSVRAWDL-VRYRNFRTLTSPTPAQYGSLAVD 505

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P    +V  +      Q+YV          +    E       +SP   L+A   +    
Sbjct: 506 PGGEVVV--AGAVDTFQIYVWSLRTGRLLDVLSGHEGPITGLAFSPVTSLLASASWDRTV 563

Query: 371 FAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               V    GS    +L    ++ A      GR L  +   DG     +Y  D
Sbjct: 564 RMWDVYDSGGSGSSDVLDHRHDVLAIAMRADGRQLA-AATADG----SIYLWD 611



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 62/211 (29%), Gaps = 32/211 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +  L+ SR++I     F+     +A        +L   + + R +    +    +  +
Sbjct: 359 TRLHTLSISRERITSL-SFNHTGDWLAVGCARLGQLL---VWEWRSESYVLKQQAHQQDL 414

Query: 261 LAPRFSSNGKRALI--------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            A  FS +G               Q+       +    +     +T      +  S S D
Sbjct: 415 TAAAFSPDGAMIATGGEDCKVKVFQQSTGFCFVTFSEHTAPVTAVTFLPSGAVLLSASLD 474

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            S   ++  R                + ++    A Y      P G+++         F 
Sbjct: 475 GSVRAWDLVRYRNF------------RTLTSPTPAQYGSLAVDPGGEVVVAGAVD--TFQ 520

Query: 373 IGVMKKDGSQERLLVEDSNLQAP----TWSP 399
           I V        RLL   S  + P     +SP
Sbjct: 521 IYVWSLRTG--RLLDVLSGHEGPITGLAFSP 549


>gi|296226113|ref|XP_002758783.1| PREDICTED: WD repeat-containing protein 5B-like [Callithrix
           jacchus]
          Length = 330

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 75/204 (36%), Gaps = 17/204 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +   +FSPN + +A ++ D      + +      +  K +      I    +
Sbjct: 36  TLVGHTEAVSSVKFSPNGEWLASSSADR----LIIIWGAYDGKYEKTLYGHNLEISDVAW 91

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREG 324
           SS+  R + S   D+ + ++  D +S    + L          +++P S+ I+  S    
Sbjct: 92  SSDSSRLV-SASDDKTLKLW--DARSGKCLKTLEGHSNYVFCCNFNPPSNLIISGSF--- 145

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-E 383
            E + + +    +  +             ++  G LI    + G      +      Q  
Sbjct: 146 DETVKIWEVKTGNCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDG---LCRIWDAASGQCL 202

Query: 384 RLLVEDSN--LQAPTWSPSGRSLI 405
           + LV+D N  +    +SP+G+ ++
Sbjct: 203 KTLVDDGNPPVSFVKFSPNGKYIL 226



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 62/172 (36%), Gaps = 9/172 (5%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG   + L    +  + +  +S +  ++  A+ D      + L D R  +  K +    
Sbjct: 71  YDGKYEKTLY-GHNLEISDVAWSSDSSRLVSASDDK----TLKLWDARSGKCLKTLEGHS 125

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           + +    F+      +IS   DE + I+ V    N  + L+       +  ++   S IV
Sbjct: 126 NYVFCCNFNPP-SNLIISGSFDETVKIWEV-KTGNCLKTLSAHSDPVSAVHFNCSGSLIV 183

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             S  +G  +++   ++G   K +  D         +SP G  I        
Sbjct: 184 SGSY-DGLCRIWDA-ASGQCLKTLVDDGNPPVSFVKFSPNGKYILTATLDNT 233


>gi|302506334|ref|XP_003015124.1| hypothetical protein ARB_06884 [Arthroderma benhamiae CBS 112371]
 gi|291178695|gb|EFE34484.1| hypothetical protein ARB_06884 [Arthroderma benhamiae CBS 112371]
          Length = 683

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 85/211 (40%), Gaps = 22/211 (10%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +A+ +     +L V+   +      K+ G+  SM  A  +S +G++  I+   D  + 
Sbjct: 79  EWLAFGSSKLGQLL-VWEWQSE-SYILKQQGHLDSMN-ALVYSPDGRKI-ITAADDGKIK 134

Query: 284 IYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++  D+++       T       +  ++   + ++F +  +G  + + +     + K  +
Sbjct: 135 VW--DIKTGFCIVTFTEHKSGVTACEFTKRGN-VLFTASLDGSVRAWDL-VRYRNFKTFT 190

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWS 398
                S+      P G+++         F I +        +LL + S  + P    ++S
Sbjct: 191 APSRLSFSSLAVDPSGEIVCAGSLD--SFDIHIWSVQTG--QLLDQLSGHEGPVSSLSFS 246

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             G  ++ +     D   +++SI   GR++T
Sbjct: 247 ADGSHVVSASW---DRTVRIWSIF--GRSQT 272



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 67/197 (34%), Gaps = 13/197 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ +K+  A  D +    + + D +           +S + A  F+  G   L +   
Sbjct: 117 YSPDGRKIITAADDGK----IKVWDIKTGFCIVTFTEHKSGVTACEFTKRGN-VLFTASL 171

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++    +  T    ++ S S + D S  +  +       +++        
Sbjct: 172 DGSVRAWDL-VRYRNFKTFTAPSRLSFS-SLAVDPSGEIVCAGSLDSFDIHIWSVQTGQL 229

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLLVEDSNLQAPT 396
                  E       +S  G  +    +      I  +  +   S+   L   S++    
Sbjct: 230 LDQLSGHEGPVSSLSFSADGSHVVSASWD-RTVRIWSIFGRSQTSEPLQL--QSDVLCVA 286

Query: 397 WSPSGRSLIFSRKKDGD 413
           + P G+ +  +   DG 
Sbjct: 287 FRPDGKQIA-ASTLDGQ 302



 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 5/81 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  +    FS +   V  A++D      V +               +S +L   F 
Sbjct: 233 LSGHEGPVSSLSFSADGSHVVSASWDR----TVRIWSIFGRSQTSEPLQLQSDVLCVAFR 288

Query: 267 SNGKRALISVQKDEAMDIYSV 287
            +GK+   +   D  +  +SV
Sbjct: 289 PDGKQIA-ASTLDGQLTFWSV 308



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D   +++   +  +   ++      + +  FS++G   ++S   D  + I+S+  +S  +
Sbjct: 215 DSFDIHIWSVQTGQLLDQLSGHEGPVSSLSFSADGSH-VVSASWDRTVRIWSIFGRSQTS 273

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           E L       +  ++ PD  QI   S  +G+   + +
Sbjct: 274 EPL-QLQSDVLCVAFRPDGKQIA-ASTLDGQLTFWSV 308


>gi|13376840|ref|NP_079510.1| WD repeat-containing protein 61 [Homo sapiens]
 gi|109082056|ref|XP_001107654.1| PREDICTED: WD repeat-containing protein 61-like isoform 2 [Macaca
           mulatta]
 gi|296228614|ref|XP_002759887.1| PREDICTED: WD repeat-containing protein 61-like isoform 1
           [Callithrix jacchus]
 gi|296228616|ref|XP_002759888.1| PREDICTED: WD repeat-containing protein 61-like isoform 2
           [Callithrix jacchus]
 gi|297297027|ref|XP_002804946.1| PREDICTED: WD repeat-containing protein 61-like [Macaca mulatta]
 gi|297297029|ref|XP_002804947.1| PREDICTED: WD repeat-containing protein 61-like [Macaca mulatta]
 gi|297697214|ref|XP_002825763.1| PREDICTED: WD repeat-containing protein 61-like isoform 1 [Pongo
           abelii]
 gi|297697216|ref|XP_002825764.1| PREDICTED: WD repeat-containing protein 61-like isoform 2 [Pongo
           abelii]
 gi|297697218|ref|XP_002825765.1| PREDICTED: WD repeat-containing protein 61-like isoform 3 [Pongo
           abelii]
 gi|297697220|ref|XP_002825766.1| PREDICTED: WD repeat-containing protein 61-like isoform 4 [Pongo
           abelii]
 gi|332252718|ref|XP_003275503.1| PREDICTED: WD repeat-containing protein 61-like isoform 1 [Nomascus
           leucogenys]
 gi|332252720|ref|XP_003275504.1| PREDICTED: WD repeat-containing protein 61-like isoform 2 [Nomascus
           leucogenys]
 gi|332252722|ref|XP_003275505.1| PREDICTED: WD repeat-containing protein 61-like isoform 3 [Nomascus
           leucogenys]
 gi|332252724|ref|XP_003275506.1| PREDICTED: WD repeat-containing protein 61-like isoform 4 [Nomascus
           leucogenys]
 gi|332844453|ref|XP_510527.3| PREDICTED: WD repeat-containing protein 61 isoform 3 [Pan
           troglodytes]
 gi|332844455|ref|XP_003314852.1| PREDICTED: WD repeat-containing protein 61 isoform 1 [Pan
           troglodytes]
 gi|332844457|ref|XP_003314853.1| PREDICTED: WD repeat-containing protein 61 isoform 2 [Pan
           troglodytes]
 gi|74761365|sp|Q9GZS3|WDR61_HUMAN RecName: Full=WD repeat-containing protein 61; AltName:
           Full=Meiotic recombination REC14 protein homolog
 gi|11139242|gb|AAG31639.1|AF309553_1 meiotic recombination protein REC14 [Homo sapiens]
 gi|33150694|gb|AAP97225.1|AF100786_1 G protein beta subunit-like protein [Homo sapiens]
 gi|10437122|dbj|BAB14986.1| unnamed protein product [Homo sapiens]
 gi|14603238|gb|AAH10080.1| WD repeat domain 61 [Homo sapiens]
 gi|119619580|gb|EAW99174.1| WD repeat domain 61, isoform CRA_b [Homo sapiens]
 gi|119619581|gb|EAW99175.1| WD repeat domain 61, isoform CRA_b [Homo sapiens]
 gi|312150324|gb|ADQ31674.1| WD repeat domain 61 [synthetic construct]
          Length = 305

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 113 AFSPDSQYLATGTHVGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 168 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 223

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 224 LAGTLSGHASWVLNVAFCPD 243



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 91/284 (32%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQI  K   + P     +A 
Sbjct: 57  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQI--KSIDAGPVDAWTLA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 114 -FSPDSQYLAT---GTHVGKVNI--FGVESGKKEYSL--------------DTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L+      ++ ++ PD +           + + V   
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTHF---VSSSSDKSVKVWDV 261

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I +  
Sbjct: 262 GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHIYD 302


>gi|320035070|gb|EFW17012.1| dipeptidyl aminopeptidase [Coccidioides posadasii str. Silveira]
          Length = 777

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 41/124 (33%), Gaps = 27/124 (21%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            +++         +  D+        WSP+G++IA+ + +     + + K    +   + 
Sbjct: 124 YHILDLESGSLTPLDNDQNGDIQYAAWSPKGNVIAYVRNN----NLYLWK--NGEVTQIT 177

Query: 388 EDSN----LQAPTW---------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           ED         P W               SP G  + + R    +TG   Y+I     N+
Sbjct: 178 EDGGPNTFNGVPDWVYEEEIFGTPFALWFSPDGEYVAYMRTD--ETGVPTYTIPYYMDNQ 235

Query: 429 TLIN 432
               
Sbjct: 236 KFAP 239



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/134 (11%), Positives = 34/134 (25%), Gaps = 30/134 (22%)

Query: 221 PNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P+   V +AT     Y        +++D           +    I    +S  G      
Sbjct: 101 PDLSAVLWATNYKKQYRHSFFADYHILDLESGSLTPLDNDQNGDIQYAAWSPKGNVIAYV 160

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASY---------------SPDSSQIV 317
              +  +       ++    ++T     N       +               SPD   + 
Sbjct: 161 RNNNLYLW------KNGEVTQITEDGGPNTFNGVPDWVYEEEIFGTPFALWFSPDGEYVA 214

Query: 318 F-ESDREGKEQLYV 330
           +  +D  G     +
Sbjct: 215 YMRTDETGVPTYTI 228


>gi|307776636|pdb|3OW8|A Chain A, Crystal Structure Of The Wd Repeat-Containing Protein 61
 gi|307776637|pdb|3OW8|B Chain B, Crystal Structure Of The Wd Repeat-Containing Protein 61
 gi|307776638|pdb|3OW8|C Chain C, Crystal Structure Of The Wd Repeat-Containing Protein 61
 gi|307776639|pdb|3OW8|D Chain D, Crystal Structure Of The Wd Repeat-Containing Protein 61
          Length = 321

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 129 AFSPDSQYLATGTHVGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 183

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 184 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 239

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 240 LAGTLSGHASWVLNVAFCPD 259



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 91/284 (32%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQI  K   + P     +A 
Sbjct: 73  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQI--KSIDAGPVDAWTLA- 129

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 130 -FSPDSQYLAT---GTHVGKVNI--FGVESGKKEYSL--------------DTRGKFILS 169

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 170 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 224

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L+      ++ ++ PD +           + + V   
Sbjct: 225 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTHF---VSSSSDKSVKVWDV 277

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I +  
Sbjct: 278 GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHIYD 318


>gi|237732402|ref|ZP_04562883.1| YVTN beta-propeller repeat-containing protein [Citrobacter sp.
           30_2]
 gi|226907941|gb|EEH93859.1| YVTN beta-propeller repeat-containing protein [Citrobacter sp.
           30_2]
          Length = 349

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 48/274 (17%), Positives = 101/274 (36%), Gaps = 25/274 (9%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS--PNQQKVAYATYDD 233
            +  +  +V       ++ V +  GAN  + + S    + +   S   +  K ++A   +
Sbjct: 39  HVGKMPHNVQVSPDNKTVWVTNL-GANGTHSSGSEHMDMSKDAHSEKMDMGKDSHAGKKE 97

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
              + V   +     A   +G   + ++    + +GK A IS   D    I  +D +   
Sbjct: 98  HGEVWVINAENDTVIAKLPVGAHPAHVV---VTPDGKMAYISNSADNT--ISVIDAE--H 150

Query: 294 TERLTNTLFINI-----SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            + LT    IN+         SPD  + V+ ++ +G     V  ++  +  +I   K  +
Sbjct: 151 LKNLTT---INVGKFPHGLRVSPDGKE-VYIANMKGGSVSVVDTASNKEVAQIPLGKMPA 206

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPSGR-SLIF 406
                +SP G  + F   SGE  A+ V+     +    +    +    + +P G+  L+ 
Sbjct: 207 QVG--FSPDGK-LVFVSLSGED-AVAVIDTATRKVVKKINVGTVPIQLFGTPDGKSMLVT 262

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           ++      G+ +  ID+         T    +  
Sbjct: 263 NQGSKSKPGNTINMIDIASLTVAKTITTGNGAHG 296


>gi|209521892|ref|ZP_03270564.1| 6-phosphogluconolactonase [Burkholderia sp. H160]
 gi|209497667|gb|EDZ97850.1| 6-phosphogluconolactonase [Burkholderia sp. H160]
          Length = 439

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/333 (14%), Positives = 102/333 (30%), Gaps = 42/333 (12%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH--TISDDIYQ 164
           G   ++ G       + + V FR +D K           +   S+  ++H       + +
Sbjct: 72  GVYTMLVGTYTSGKSEGIYV-FR-FDTKTGAATQVSVTQTVNPSFLVVSHDRRFVYSVNE 129

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQ-ILFEPRFS-- 220
            + G+ G    R    +    +   + + L  +  DG +  YL+ S D   L    +S  
Sbjct: 130 -LPGDNGPATQRGGISAFGFDAAHGQLTFLNKVSSDGNDPCYLSISPDGRYLLTANYSVA 188

Query: 221 --PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
             P      +    +  +             P +     S + +  FS +G       Q 
Sbjct: 189 PDPGGSFAVFPLQANGRVGTSVQTVHHEGSGPVKGRQDSSHVHSTVFSPDGHYLF--AQD 246

Query: 279 DEAMDIYSV-----DLQSNATERLTNTLFIN----ISAS---YSPDSSQIVFESDREGKE 326
             A  +Y+      +         T+  +             +SPD       S+     
Sbjct: 247 LGADKLYAYHYAPQNSSGAGPLVATDWGYTQQKAGTGPRHLIFSPDGKHAYLTSEL--VA 304

Query: 327 QLYVMQSNGSDQKRIS--------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAI---GV 375
            +     +    K +           ++        SP G  + +    G+   I    V
Sbjct: 305 TVSTFDYDDGRLKLVQTLPLTEPGFKEQVGAAAIHLSPDGRFV-YASNRGDANEIVIFAV 363

Query: 376 MKKDGSQERLLVEDSNLQAPT-WS--PSGRSLI 405
              +G  +++  + S  ++P  ++  P+G  LI
Sbjct: 364 DPANGHLKQIGRQSSLGKSPREFAIDPTGNWLI 396



 Score = 36.9 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 34/225 (15%), Positives = 66/225 (29%), Gaps = 45/225 (20%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ--------- 277
            Y +   E I  V+  DT+   A +              S + +R + SV          
Sbjct: 80  TYTSGKSEGIY-VFRFDTKTGAATQVSVTQTVNPSFLVVSHD-RRFVYSVNELPGDNGPA 137

Query: 278 -KDEAMDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFES-----DREGKEQL 328
            +   +  +  D        L           Y   SPD   ++  +     D  G   +
Sbjct: 138 TQRGGISAFGFDAAHGQLTFLNKVSSDGNDPCYLSISPDGRYLLTANYSVAPDPGGSFAV 197

Query: 329 YVMQSNG---SDQKRISQDKEASY---------FDPVWSPQGDLIAFTKFSGEK----FA 372
           + +Q+NG   +  + +  +                 V+SP G  + F +  G      + 
Sbjct: 198 FPLQANGRVGTSVQTVHHEGSGPVKGRQDSSHVHSTVFSPDGHYL-FAQDLGADKLYAYH 256

Query: 373 IGVMKKDGSQERLLVEDSNLQ-----APT---WSPSGRSLIFSRK 409
                  G+   +  +    Q      P    +SP G+    + +
Sbjct: 257 YAPQNSSGAGPLVATDWGYTQQKAGTGPRHLIFSPDGKHAYLTSE 301


>gi|116782369|gb|ABK22482.1| unknown [Picea sitchensis]
          Length = 314

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 76/208 (36%), Gaps = 15/208 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++++     + +   +FS + + +  A+ D      V +       A + +      +
Sbjct: 15  YKLKHILTGHKRAVSSVKFSADGKLLGSASADK----SVRIWSAGDGSAKRELQGHAEGV 70

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+    + S   D+ + I+  D+ +    + L          +++P S+ IV  
Sbjct: 71  SDMAWSSD-SHYVCSASDDKTLRIW--DVHTGDCIKTLKGHTNYVFCVNFNPQSNLIVSG 127

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +         ++            ++  G LI  + + G    I      
Sbjct: 128 SF---DETVRIWDVRTGKCLKVLPAHSDPVTAVHFNRDGSLIVSSSYDG-LCRIW-DSAT 182

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLI 405
           G   + L++D N  +    +SP+G+ ++
Sbjct: 183 GHCLKTLIDDENPPVSFVNFSPNGKFIL 210


>gi|156050251|ref|XP_001591087.1| hypothetical protein SS1G_07712 [Sclerotinia sclerotiorum 1980]
 gi|154692113|gb|EDN91851.1| hypothetical protein SS1G_07712 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 851

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 86/223 (38%), Gaps = 19/223 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I  L+ S++ I F    + + + +A+       +L V+   +      K+ G+F SM   
Sbjct: 257 IHTLSISQNDIDFV-TINKSGEWLAFGASKLGQLL-VWEWQSE-SYILKQQGHFDSMNSL 313

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             +S +G++  I+   D  + ++ V+         T       +  ++   + ++F S  
Sbjct: 314 -VYSPDGQKI-ITTADDGKIKVWDVN-TGFCIVTFTEHTSGVTACEFAKRGN-VLFTSSL 369

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G  + + +     + +  +     S+      P G+++         F I +       
Sbjct: 370 DGSIRAWDL-IRYRNFRTFTAPTRLSFSSLAVDPSGEVVCAGSLD--SFDIHIWSVQTG- 425

Query: 383 ERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +LL   S  + P     ++P+G  ++       D   +++SI
Sbjct: 426 -QLLDRLSGHEGPVSSLAFAPNGGVVVSGSW---DHTVRIWSI 464


>gi|73985509|ref|XP_533826.2| PREDICTED: similar to N-acylaminoacyl-peptide hydrolase isoform 1
           [Canis familiaris]
          Length = 732

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 63/188 (33%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D +  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 224 LCVLDVESGNISVLEGVPESVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRFCTNRRSALY 283

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNA-- 293
            +D    +  + + +    + +PR S +  R +               +   D  +    
Sbjct: 284 YVDLTGGQC-ELLSDDSLAVSSPRLSPDQCRIVYLRYPSLVPHHQCSQLCLYDWYTKVTS 342

Query: 294 ------TERLT-NTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  N   I  S      +S DS ++VF+S +  ++ L+V+ +       ++
Sbjct: 343 VVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFVVDTQMGSVTSLT 402

Query: 343 QDKEASYF 350
                  +
Sbjct: 403 AGGSGGSW 410



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 39/143 (27%), Gaps = 21/143 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----- 326
                 +     +Y VDL     E L++      S   SPD  +IV+             
Sbjct: 272 IRFCTNR--RSALYYVDLTGGQCELLSDDSLAVSSPRLSPDQCRIVYLRYPSLVPHHQCS 329

Query: 327 QLYVMQ--------SNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIG 374
           QL +                +++ ++    Y        WS     + F      +  + 
Sbjct: 330 QLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLF 389

Query: 375 VMKKDGSQERLLVEDSNLQAPTW 397
           V+         L    +    +W
Sbjct: 390 VVDTQMGSVTSLTAGGSGG--SW 410


>gi|30694538|ref|NP_191249.2| aladin-related / adracalin-related [Arabidopsis thaliana]
 gi|26452390|dbj|BAC43280.1| unknown protein [Arabidopsis thaliana]
 gi|28951013|gb|AAO63430.1| At3g56900 [Arabidopsis thaliana]
 gi|332646063|gb|AEE79584.1| aladin-related / adracalin-related protein [Arabidopsis thaliana]
          Length = 447

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 35/114 (30%), Gaps = 5/114 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SP    +   S       ++ +        R             WSP GD   F    
Sbjct: 219 SWSPCGRYLASASYDSSSFTIWDVSQGAGTPIR---RGLGGISMLKWSPTGDYF-FAARF 274

Query: 368 GEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              F +       S+   L     ++    W P GR ++ S  K    GS  +S
Sbjct: 275 DGTFCLWETNTWTSEPWSLSSGSGSVTGAIWDPEGRFILISFSKSSTLGSVHFS 328



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 4/106 (3%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            I A  +S  G+    +     +  I+  D+   A   +   L       +SP      F
Sbjct: 214 QISALSWSPCGRYLASASYDSSSFTIW--DVSQGAGTPIRRGLGGISMLKWSPTGDYF-F 270

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +  +G   L+   +  S+   +S     S    +W P+G  I  +
Sbjct: 271 AARFDGTFCLWETNTWTSEPWSLSS-GSGSVTGAIWDPEGRFILIS 315



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 58/200 (29%), Gaps = 42/200 (21%)

Query: 269 GKRA-LISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREG-- 324
           GK         ++       D        LT+    N+ A  + P+  + +  + R G  
Sbjct: 110 GKHIIAFISGANQVTIRDYEDKDEKEPCILTSDSQRNVKALEWRPNGGKSLSIACRGGIC 169

Query: 325 -----KEQLYVMQSNGSDQKR--ISQDKEASY--------------FDPVWSPQGDLIAF 363
                      +  +G    R  +S+     +                  WSP G  +A 
Sbjct: 170 IWAASYPGNMALVRSGGSALRGSLSRGSGTRWILVDFLRCQNDEQISALSWSPCGRYLAS 229

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +    F I  +   G+   +      +    WSP+G    F+ + DG           
Sbjct: 230 ASYDSSSFTIWDVS-QGAGTPIRRGLGGISMLKWSPTGDYF-FAARFDGTFC-------- 279

Query: 424 NGRNETLINTPAYASDPQWV 443
                 L  T  + S+P W 
Sbjct: 280 ------LWETNTWTSEP-WS 292


>gi|332974270|gb|EGK11202.1| hypothetical protein HMPREF9374_2020 [Desmospora sp. 8437]
          Length = 468

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 81/231 (35%), Gaps = 44/231 (19%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  K+     D +   +++L   R  R  K   +   +      S  G   +   +    
Sbjct: 120 DGSKI--QIKDYKKDRKLFLE--RGGRMVKVSDSLPLVKEPVSISPKGNAFVYCEKSGSK 175

Query: 282 MDIYSVDLQSNATERLTNTLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           + ++   +QS     LT  +     +     S+S D   ++         ++Y       
Sbjct: 176 LTLHLYTVQSGQDVALTKGVAETTVSGEEWVSWSADGRYLLI------GNEIYR-----G 224

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFT------KFSGEK---------FAIGVMKKDGS 381
           D KR+           VW+P+G  +A+       K S  K           + V+  D  
Sbjct: 225 DGKRVYTLAGG--QTGVWAPKGARLAYVVSPHNGKNSDGKPEERPALLGSRVAVLHPDRG 282

Query: 382 QE----RLLVEDSNLQAPTWSPSGRSLIFSR--KKDGDTGSKLYSIDLNGR 426
           +     R +     +  P W P+GR L F    ++DG+T  +   + ++G+
Sbjct: 283 KTETLYRAVKGSWIVGQPAWDPAGRYLAFPTGKQQDGETFFEEVHV-IDGK 332



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/281 (15%), Positives = 88/281 (31%), Gaps = 46/281 (16%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR- 252
            V  RD      +  +  Q +    F  ++    Y     +     Y+ D + +R  K  
Sbjct: 48  WVTGRDAGPPGVIYEAEFQEVTPYLFQNDR---FYFWGKTKSSSGYYIFDVKRNRLKKVN 104

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSP 311
             +      A     +G +  I   KD   D      +     +++++L +     S SP
Sbjct: 105 WTDRYGDSRAVHHLGDGSKIQI---KDYKKDRKLFLERGGRMVKVSDSLPLVKEPVSISP 161

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQD----KEASYFDPVWSPQGDLIAFTKFS 367
             +  V+      K  L++          +++       +      WS  G  +      
Sbjct: 162 KGNAFVYCEKSGSKLTLHLYTVQSGQDVALTKGVAETTVSGEEWVSWSADGRYLLIGNE- 220

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS------RKKDGDT------- 414
                  + + DG +   L          W+P G  L +       +  DG         
Sbjct: 221 -------IYRGDGKRVYTLAGGQTG---VWAPKGARLAYVVSPHNGKNSDGKPEERPALL 270

Query: 415 GSKLYSIDLN-GRNETL---------INTPAYASDPQWVGF 445
           GS++  +  + G+ ETL         +  PA+    +++ F
Sbjct: 271 GSRVAVLHPDRGKTETLYRAVKGSWIVGQPAWDPAGRYLAF 311


>gi|50303433|ref|XP_451658.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640790|emb|CAH02051.1| KLLA0B02827p [Kluyveromyces lactis]
          Length = 942

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 69/192 (35%), Gaps = 31/192 (16%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFS------------PNQQKVAYATYDDE--- 234
           K ++  +  DG N + ++   D I+    FS            P    V + + D     
Sbjct: 504 KKAVTGIAMDGMNRKMVSCGLDGIVGFYDFSKSTFLGKLKLDSPITSMVYHRSSDLFALA 563

Query: 235 -DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-- 291
            D L + ++D+   +  +++    + I +  FS +G+  + S   D  +  + +      
Sbjct: 564 LDDLSIVVVDSVTQKVVRQLWGHSNRISSFDFSPDGRWIV-SSSLDSTIRTWDLPTGGCI 622

Query: 292 ---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--GSDQKRISQDKE 346
                   +TN         +SP+   +   S       L+  ++       ++I +++ 
Sbjct: 623 DGMKVENVITNIK-------FSPNGDLLATTSVSGNGISLWANRAQFISVSTRQIDEEEF 675

Query: 347 ASYFDPVWSPQG 358
           A+   P  S  G
Sbjct: 676 ATVMLPNVSGDG 687



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 46/136 (33%), Gaps = 10/136 (7%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L ++  D+   +    +      +L        S  +SPD   IV  S       +    
Sbjct: 559 LFALALDDLSIVVVDSVTQKVVRQLWGHSNRISSFDFSPDGRWIVSSSL---DSTIRTWD 615

Query: 333 SNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVED 389
                   I   K E    +  +SP GDL+A T  SG   ++   +        R + E+
Sbjct: 616 LPTGGC--IDGMKVENVITNIKFSPNGDLLATTSVSGNGISLWANRAQFISVSTRQIDEE 673

Query: 390 --SNLQAPTWSPSGRS 403
             + +  P  S  G S
Sbjct: 674 EFATVMLPNVSGDGGS 689


>gi|317485011|ref|ZP_07943894.1| hypothetical protein HMPREF0179_01247 [Bilophila wadsworthia 3_1_6]
 gi|316923749|gb|EFV44952.1| hypothetical protein HMPREF0179_01247 [Bilophila wadsworthia 3_1_6]
          Length = 414

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 13/104 (12%)

Query: 310 SPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPD        S    + Q+ V   +G     +  D     +  V+SP GD  A      
Sbjct: 314 SPDGKHAAALGSQNNSRFQIAV---DGK----VWDDTFDMAWPVVFSPAGDRAAAKVRRD 366

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            KFA+ V   DG+   ++     +  PT+SP G  L+F   KDG
Sbjct: 367 GKFALYV---DGNA--VIENLDGVWNPTFSPDGTVLLFCSLKDG 405



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 55/165 (33%), Gaps = 24/165 (14%)

Query: 219 FSP-----NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++P     + + +            V    T  +     + +          S +GK A 
Sbjct: 269 WAPQAAATDGEYIWAVAAPSYGAFTVACNATPWNCRFPSVTDL-------VLSPDGKHAA 321

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
               ++ +    +VD         T  +   +   +SP   +   +  R+GK  LYV   
Sbjct: 322 ALGSQNNSRFQIAVD---GKVWDDTFDMAWPV--VFSPAGDRAAAKVRRDGKFALYV--- 373

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           +G+       +     ++P +SP G ++ F       F+   ++ 
Sbjct: 374 DGNAVI----ENLDGVWNPTFSPDGTVLLFCSLKDGVFSRHTVRL 414


>gi|299742581|ref|XP_001832582.2| WD repeat-containing protein [Coprinopsis cinerea okayama7#130]
 gi|298405250|gb|EAU89331.2| WD repeat-containing protein [Coprinopsis cinerea okayama7#130]
          Length = 937

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/243 (15%), Positives = 79/243 (32%), Gaps = 29/243 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N+          +    +SP+ +     + D     R++ ++      PK     R  +
Sbjct: 115 FNLHRTYTGHHDEVLSISWSPDSRCFITTSRDM--TARLFTLNPLDGFRPKTFAGHRDAV 172

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSV----------DLQSNATE---RLTNTLFINISA 307
            +  FS+NG     +V KD A+  +             + S +TE   R+ NT +     
Sbjct: 173 QSAYFSANGDTI-YTVSKDGAVFTWKAKDEDGSDSDEPMASTSTEIYGRIANTRWGIQKR 231

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGS-----DQKRISQDKEASYFDPVWS-----PQ 357
           +Y   ++  V  S       L V+          +    +     S      S       
Sbjct: 232 NYFNQANTKVVCSTFHPASNLLVVGFTSGIFGIWELPEFTSIHTLSISQEKISSVAINAS 291

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G+ +AF      +  +   + +    +      ++    ++P G+++        D   K
Sbjct: 292 GEWLAFGARKLGQLLVWEWQSESYVLKQQGHFFDMNTLDYAPDGQTIA---TGGDDGKVK 348

Query: 418 LYS 420
           L+S
Sbjct: 349 LWS 351



 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 55/170 (32%), Gaps = 11/170 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-- 275
             SP+   +     D   +L        +        NF   +   +FS +GK   ++  
Sbjct: 42  ALSPDGNVLISVDEDGRALLVNARRGVVMHHF-----NFHKTVKDIKFSPDGKYIAVTHG 96

Query: 276 --VQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             VQ     +    +       R  T      +S S+SPDS   +  S R+   +L+ + 
Sbjct: 97  PHVQVWCTPNHLVREFAPFNLHRTYTGHHDEVLSISWSPDSRCFITTS-RDMTARLFTLN 155

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                + +       +     +S  GD I      G  F      +DGS 
Sbjct: 156 PLDGFRPKTFAGHRDAVQSAYFSANGDTIYTVSKDGAVFTWKAKDEDGSD 205



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 72/224 (32%), Gaps = 30/224 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRA---PKRIGNFRSMILAPRFSSNGKRALI 274
           +FSP+ + +A        +        R        +        +L+  +S +  R  I
Sbjct: 83  KFSPDGKYIAVTHGPHVQVWCTPNHLVREFAPFNLHRTYTGHHDEVLSISWSPD-SRCFI 141

Query: 275 SVQKDEAMDIYSVD-LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +  +D    +++++ L     +          SA +S +   I   S             
Sbjct: 142 TTSRDMTARLFTLNPLDGFRPKTFAGHRDAVQSAYFSANGDTIYTVSKDGAVFTWKAKDE 201

Query: 334 NGSDQ------------KRISQDKEA----SYFDPV--------WSPQGDLIAFTKFSGE 369
           +GSD              RI+  +      +YF+          + P  +L+    F+  
Sbjct: 202 DGSDSDEPMASTSTEIYGRIANTRWGIQKRNYFNQANTKVVCSTFHPASNLLV-VGFTSG 260

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            F I  + +  S   L +    + +   + SG  L F  +K G 
Sbjct: 261 IFGIWELPEFTSIHTLSISQEKISSVAINASGEWLAFGARKLGQ 304



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 65/180 (36%), Gaps = 9/180 (5%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R  T  R          P+ + VA       D   V+L   +  +    +      I 
Sbjct: 399 NFRVFTSPRPVQFSCLAVDPSGEVVA---AGSTDSFEVFLWSVQTGKLLDILTGHEGPIS 455

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +  FS  G   L S   D+ + I+SV  +S A E   N     ++ ++ PD +++   S 
Sbjct: 456 SLAFSPAGDNQLASGSWDKTVRIWSVFGRSRAVEPF-NLSGDVLAVAFRPDGNELA-VST 513

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +G+   + ++ +G     I   K+ S           + A    SG+ +       DG 
Sbjct: 514 LDGQITFFDVR-DGKQTNVIEGRKDVSGGRKA---DDRVSAANSSSGKSYNSLAYTADGR 569


>gi|315497404|ref|YP_004086208.1| hypothetical protein Astex_0361 [Asticcacaulis excentricus CB 48]
 gi|315415416|gb|ADU12057.1| hypothetical protein Astex_0361 [Asticcacaulis excentricus CB 48]
          Length = 443

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 54/332 (16%), Positives = 115/332 (34%), Gaps = 40/332 (12%)

Query: 107 GAQVLV----TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI 162
           G +++     TG++    KD   ++  +  V     ++   +       +      + D 
Sbjct: 130 GIEIVAIDMDTGKIRTIAKD---IKGYVTTVNADDTLLAGTWAEREYQLQPGPKVANTDG 186

Query: 163 YQSITGEKG---DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
             +  G  G    F +         ++  I   +  +D      + +T S D +    +F
Sbjct: 187 GYNAIGPDGKPLSFQAAKEVRMAERLAQNIPMEIFTLDIQTGERKVVTASTDWLNHV-QF 245

Query: 220 SP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALI 274
           SP +  ++ Y        +   +   R D   K   + RSM +       FS +G+R L 
Sbjct: 246 SPTDPHRLMYCHEGPWHSVDR-IWTIRTDGTGKENVHKRSMNMEIAGHEFFSFDGERILY 304

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +Q     D +         +R+   +  N    +S       F+  R+GK    +   +
Sbjct: 305 DLQTPRGEDFWLASYDLKTHKRIWYHMERN---EWSVH-----FQISRDGK----LFAGD 352

Query: 335 GSDQKRISQDKEASY---FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           G D   +++  +  +   F P       L      + E    GV++   ++   L   + 
Sbjct: 353 GGDADMVARAPDGKWLYLFQPEIIDD--LGVSAPNAAELVRPGVLRA--TKLVNLKTHNY 408

Query: 392 LQAP--TWSPSGRSLIFSRKKDGDTGSKLYSI 421
              P   ++P G+ ++F     G     +Y++
Sbjct: 409 NTEPNLQFTPDGKWIVFRSNMHGP--IHVYAV 438



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 54/178 (30%), Gaps = 33/178 (18%)

Query: 192 SLCVMDRDGANIRYLTPS--RDQILFEPRFSPNQQKVAY------------ATYDDEDIL 237
            +  +  DG     +       +I     FS + +++ Y            A+YD +   
Sbjct: 266 RIWTIRTDGTGKENVHKRSMNMEIAGHEFFSFDGERILYDLQTPRGEDFWLASYDLKTHK 325

Query: 238 RVYLMDTR--------IDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEAMDIY 285
           R++    R        I R  K              + +GK   +     +         
Sbjct: 326 RIWYHMERNEWSVHFQISRDGKLFAGDGGDADMVARAPDGKWLYLFQPEIIDDLGVSAPN 385

Query: 286 SVDLQSNATERLTN-----TLFINISAS--YSPDSSQIVFESDREGKEQLYVMQSNGS 336
           + +L      R T      T   N   +  ++PD   IVF S+  G   +Y +Q    
Sbjct: 386 AAELVRPGVLRATKLVNLKTHNYNTEPNLQFTPDGKWIVFRSNMHGPIHVYAVQVAKG 443


>gi|145482605|ref|XP_001427325.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124394405|emb|CAK59927.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2267

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 64/192 (33%), Gaps = 25/192 (13%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL------ 273
            +P   K  Y T   +  +RV+ +D +      +   F S + A  +S++GK  +      
Sbjct: 1284 APTGHK--YVTGGGDKTVRVWDIDQKKMVCVSKP--FPSEVRAVDWSTDGKFIVCGDLNG 1339

Query: 274  ISVQKDEAMDIYSVDLQ----SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
                 D    +  +D      +   +R   + +       SPD  ++ F +   G   L 
Sbjct: 1340 FVYLLDPNT-LQVMDTAKTIFTTMPKR--QSTYWIDDLKISPDCKKVAFGAH-GGASHLE 1395

Query: 330  VMQSN----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            V        G    +I     ++     WS    ++         + +  +  +  + + 
Sbjct: 1396 VWTIEYPKFGKQGTKIQCGLTSALTALDWSVDSSIVIVNS---GAYELKYVDVNAKKNQA 1452

Query: 386  LVEDSNLQAPTW 397
                +N +  +W
Sbjct: 1453 SSSQANTEFASW 1464


>gi|66472582|ref|NP_001018418.1| notchless protein homolog 1 [Danio rerio]
 gi|63100636|gb|AAH95217.1| Zgc:110281 [Danio rerio]
 gi|182892050|gb|AAI65749.1| Zgc:110281 protein [Danio rerio]
          Length = 476

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 40/139 (28%), Gaps = 8/139 (5%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  M +++         RLT    +     +SPD+  I   S     + +
Sbjct: 331 GHERLVSGSDDFTMFLWNPAEDKKPVARLTGHQALVNEVLFSPDTRLIASASF---DKSI 387

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +      +   WS    L+           + V      +    + 
Sbjct: 388 KIWDGKTGKYLNSLRGHVGPVYQVAWSADSRLLVSGSSDST---LKVWDIKTGKLNADLP 444

Query: 389 DSNLQAPT--WSPSGRSLI 405
               +     WSP G+ + 
Sbjct: 445 GHADEVFAVDWSPDGQRVA 463



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 8/133 (6%)

Query: 232 DDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L +   D+ P  R+   ++++    FS +  R + S   D+++ I+  D +
Sbjct: 337 SGSDDFTMFLWNPAEDKKPVARLTGHQALVNEVLFSPD-TRLIASASFDKSIKIW--DGK 393

Query: 291 SNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +      L   +      ++S DS  +V  S       L V                   
Sbjct: 394 TGKYLNSLRGHVGPVYQVAWSADSRLLVSGSS---DSTLKVWDIKTGKLNADLPGHADEV 450

Query: 350 FDPVWSPQGDLIA 362
           F   WSP G  +A
Sbjct: 451 FAVDWSPDGQRVA 463



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 59/177 (33%), Gaps = 24/177 (13%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFIN 304
           + R    +      +++  FS  GK    S   D  +  +  DL +      +       
Sbjct: 94  VARCTSSLEGHTEAVISVAFSPTGKYLA-SGSGDTTVRFW--DLSTETPHHTSRGHTHWV 150

Query: 305 ISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASY-FDPVW-----SP 356
           +S ++SPD  ++       G    Q+++       Q   +      +     W     +P
Sbjct: 151 LSIAWSPDGKKLA-----SGCKNSQIFLWDPVTGKQIGKTLTGHTKWITWLCWEPLHLNP 205

Query: 357 QGDLIAFTKFSGEKFAIGVMKKD-GSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           +   +A T        I +     G  +++L     ++    W   G  L+++  +D
Sbjct: 206 ECRYLASTSKDCT---IRIWDTVLGRYDKILTGHTHSVTCVKWGGDG--LLYTSSQD 257



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 28/206 (13%), Positives = 65/206 (31%), Gaps = 42/206 (20%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRL-----RVEFR 129
           R+  F   +     Q +T      + +              V  EG +RL          
Sbjct: 293 RTGAFEPANATINPQDLTGSLEEIKEKALKRYN-------SVRGEGHERLVSGSDDFTMF 345

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           LW+  + K+ +           R   H     + + +       ++R++       S   
Sbjct: 346 LWNPAEDKKPVA----------RLTGHQA--LVNEVLFSP----DTRLI------ASASF 383

Query: 190 KNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             S+ +   DG   +YL         +++  +S + + +   + D      + + D +  
Sbjct: 384 DKSIKIW--DGKTGKYLNSLRGHVGPVYQVAWSADSRLLVSGSSDS----TLKVWDIKTG 437

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRAL 273
           +    +      + A  +S +G+R  
Sbjct: 438 KLNADLPGHADEVFAVDWSPDGQRVA 463



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 54/178 (30%), Gaps = 16/178 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       + +      +    +SP+ +K+A          +++L D  
Sbjct: 122 SGSGDTTVRFWDLSTETPHHTSRGHTHWVLSIAWSPDGKKLA----SGCKNSQIFLWDPV 177

Query: 246 IDRA-PKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
             +   K +      I    +     +   +    S  KD  + I+   +     + LT 
Sbjct: 178 TGKQIGKTLTGHTKWITWLCWEPLHLNPECRYLA-STSKDCTIRIWDT-VLGRYDKILTG 235

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                    +  D   +++ S ++    + V ++    Q R  Q           S  
Sbjct: 236 HTHSVTCVKWGGDG--LLYTSSQD--RTIKVWRAKDGVQCRTLQGHAHWVNTLALSTD 289


>gi|326431729|gb|EGD77299.1| hypothetical protein PTSG_08393 [Salpingoeca sp. ATCC 50818]
          Length = 237

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/168 (13%), Positives = 51/168 (30%), Gaps = 9/168 (5%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             ++       +     +FSP+ + +A    DD     + + D             +  I
Sbjct: 5   FRLQRKLSGHSRPASCIKFSPDGRFLASGCADD----TINIWDVETGSLMTTFSGHKQGI 60

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S + +    S   D  + I+ V       + L +        +++P S+ +V  S
Sbjct: 61  NDIAWSPDSRFLA-SASDDTHVIIWDV-TSGRNLKTLKDHSNYVFCVNFNPQSNLLVTGS 118

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                E + +         +I            ++  G +I      G
Sbjct: 119 F---DETVRLWDVKTGKCLKILPAHSDPITSVHFNNDGSMIVSGSHDG 163



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 56/137 (40%), Gaps = 8/137 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   +++ + D +  ++        Q + +  +SP+ + +A A+ D      V + D  
Sbjct: 32  SGCADDTINIWDVETGSLMTTFSGHKQGINDIAWSPDSRFLASASDDT----HVIIWDVT 87

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             R  K + +  + +    F+      L++   DE + ++  D+++    + L       
Sbjct: 88  SGRNLKTLKDHSNYVFCVNFNPQ-SNLLVTGSFDETVRLW--DVKTGKCLKILPAHSDPI 144

Query: 305 ISASYSPDSSQIVFESD 321
            S  ++ D S IV  S 
Sbjct: 145 TSVHFNNDGSMIVSGSH 161


>gi|296127253|ref|YP_003634505.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
 gi|296019069|gb|ADG72306.1| TPR repeat-containing protein [Brachyspira murdochii DSM 12563]
          Length = 946

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 55/381 (14%), Positives = 115/381 (30%), Gaps = 75/381 (19%)

Query: 85  DSFKQKITNPDSIPRFQDWN-------SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            +  +  TN  S+  +  W        ++G   L  G +         + + ++      
Sbjct: 344 GNMIEIKTNVASVDEYNSWALYYSAYLNMGHTFLALGEITNAA-----ISYEIFLTN--- 395

Query: 138 QIIGKKFFSSPASWRKIAHTISDDI----------YQSITGEKGDFNSRILFVSE-SVVS 186
             +G  ++   +  R I+   S+D           Y+  T   G   +  +  +      
Sbjct: 396 --VGNDYYQKESLERVISLIRSNDTSIKFMPFTNNYRVNTNNDGSITTESISPNFDYERE 453

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            I  N + ++  +G   R    S +  + +  +   ++++     + +  +  Y++D   
Sbjct: 454 TIYPNGVRIIYENGKIERTKMYSNNYEVSDIIYPYGKREIETVFENGDKRIETYMIDNSK 513

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRA---------LISVQK-----------DEAMDIYS 286
               K                +G               V++           D     Y+
Sbjct: 514 SINTK---TSSGDTYEYTLYPDGSFINRKTLDSNKAFVVERSDGSITTNYKDDNGSFFYT 570

Query: 287 VDLQSNATER--------LTNTLFINISASY---SPDSSQIVF-----------ESDREG 324
             L     +R        +T T  I+ +      +PD S +V              D  G
Sbjct: 571 RSLDGTEVKRTEDNSGNIVTETKRIDGALIVKTENPDGSYVVVANYIDGSIGTTTVDTNG 630

Query: 325 KEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              L V+  +G  ++R S      ++   V +  G +I  T      F +   K DG+  
Sbjct: 631 TSSLKVVYPDGRVEERNSTGAGAGTFSYNVKADDGSIITKTYNDDGSFTVVTKKVDGTII 690

Query: 384 RLLVEDSNLQAPTWSPSGRSL 404
              V D  +      P G  +
Sbjct: 691 TDTVSDDTISEIKM-PDGTVI 710



 Score = 36.9 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 64/202 (31%), Gaps = 11/202 (5%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +  + V     +SL V+  DG      +       F      +   +   TY+D+    V
Sbjct: 621 IGTTTVDTNGTSSLKVVYPDGRVEERNSTGAGAGTFSYNVKADDGSIITKTYNDDGSFTV 680

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                        + +     +      +G      +++D + +  +++  S+    + +
Sbjct: 681 VTKKVDGTIITDTVSDDTISEIK---MPDGTVIKRIIREDGSRETTTINRDSSTITEVVS 737

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP--- 356
               +I+ +  PD S  +   D  G  +    +++GS     +     S  + V +    
Sbjct: 738 ADSSSITTTVKPDGSITITTRDTAGNTETTTTEADGSTSTSKTYIDGRSSLNEVRADGVT 797

Query: 357 -----QGDLIAFTKFSGEKFAI 373
                 G     T    E + +
Sbjct: 798 IDMENDGRNKTTTARDSEGYVL 819


>gi|260803555|ref|XP_002596655.1| hypothetical protein BRAFLDRAFT_78448 [Branchiostoma floridae]
 gi|229281914|gb|EEN52667.1| hypothetical protein BRAFLDRAFT_78448 [Branchiostoma floridae]
          Length = 224

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 34/83 (40%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              R+   D         + + + +I   +F+ +G   L S  +D+ + ++ ++   N  
Sbjct: 135 QSGRIKTWDVSTGGILLYLIDHKEVIRDLQFAPDGSMFLASASRDKTLKVWDLNDDGNMK 194

Query: 295 ERLTNTLFINISASYSPDSSQIV 317
           + L        S S+SPD+  + 
Sbjct: 195 KTLKGHNGWVYSCSWSPDAKILA 217



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 13/96 (13%), Positives = 37/96 (38%), Gaps = 2/96 (2%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L +  +   +  + V         L +   +     ++PD S  +  + R+   +++ +
Sbjct: 129 ILATGLQSGRIKTWDVS-TGGILLYLIDHKEVIRDLQFAPDGSMFLASASRDKTLKVWDL 187

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +G+ +K + +      +   WSP   ++A    +
Sbjct: 188 NDDGNMKKTL-KGHNGWVYSCSWSPDAKILASVGQN 222


>gi|27882062|gb|AAH44710.1| Nle-pending-prov protein [Xenopus laevis]
          Length = 476

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 61/178 (34%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T+      
Sbjct: 94  VTRCTSSLEGHTEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTSKGHTHW 149

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQ--KRISQDKEASYFDP----VWS 355
            +S ++SPD  ++       G    Q+++   +   Q  K ++   +   +        +
Sbjct: 150 VLSIAWSPDGKKLA-----SGCKNSQIFIWDPSTGKQIGKPLTGHSKWITWLCWEPLHLN 204

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           P+   +A          I +      Q +  L     ++ A  W   G  L++S  +D
Sbjct: 205 PESRYLASASKDCT---IRIWDTVMGQCQKILTSHTQSVTAVKWGGDG--LLYSSSQD 257



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 46/139 (33%), Gaps = 8/139 (5%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + +++   +    +R+T    +     +SPD+  I   S     + +
Sbjct: 331 GPERLVSGSDDFTLFLWAPAEEKKPLQRMTGHQALINEVLFSPDTRIIASASF---DKSI 387

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   ++ +   WS    L+           + V      +  + + 
Sbjct: 388 KLWDGKTGKFLTSLRGHVSAVYQIAWSADSRLLVSGSSDST---LKVWDSKTKKLLIDLP 444

Query: 389 DSNLQAPT--WSPSGRSLI 405
               +  +  WSP G+ + 
Sbjct: 445 GHADEVYSVDWSPDGQRVA 463



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/207 (14%), Positives = 68/207 (32%), Gaps = 44/207 (21%)

Query: 75  RSDVFNLISQDSFKQKITNPDSI------PRFQDWNSLGAQVLVTGRVIKEGKDRLRVEF 128
           R+  FN        Q ++    +       R+ +    G + LV+G              
Sbjct: 293 RTGAFNPADASVNPQDMSGSLEVLKEKALKRYNEVRGQGPERLVSGS--------DDFTL 344

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            LW   + K+ +           R   H     I + +       ++RI+       S  
Sbjct: 345 FLWAPAEEKKPL----------QRMTGHQA--LINEVLFSP----DTRII------ASAS 382

Query: 189 IKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              S+ +   DG   ++LT        +++  +S + + +   + D      + + D++ 
Sbjct: 383 FDKSIKLW--DGKTGKFLTSLRGHVSAVYQIAWSADSRLLVSGSSDS----TLKVWDSKT 436

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +    +      + +  +S +G+R  
Sbjct: 437 KKLLIDLPGHADEVYSVDWSPDGQRVA 463



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 51/158 (32%), Gaps = 22/158 (13%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            A  R T++L  +  A    ++SP    +   S   G   +     +       S+    
Sbjct: 92  RAVTRCTSSLEGHTEAVISVAFSPTGKYLASGS---GDTTVRFWDLSTETPHFTSKGHTH 148

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS--------P 399
                 WSP G  +A      +   I +      ++       + +  TW         P
Sbjct: 149 WVLSIAWSPDGKKLA---SGCKNSQIFIWDPSTGKQIGKPLTGHSKWITWLCWEPLHLNP 205

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             R L  + K   D   +++   + G+ + ++ +   +
Sbjct: 206 ESRYLASASK---DCTIRIWDT-VMGQCQKILTSHTQS 239



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 49/353 (13%), Positives = 97/353 (27%), Gaps = 111/353 (31%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------------------ 227
           SG    ++   D       + +      +    +SP+ +K+A                  
Sbjct: 122 SGSGDTTVRFWDLSTETPHFTSKGHTHWVLSIAWSPDGKKLASGCKNSQIFIWDPSTGKQ 181

Query: 228 ---------------------------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                                      Y     +D   + + DT + +  K + +    +
Sbjct: 182 IGKPLTGHSKWITWLCWEPLHLNPESRYLASASKDC-TIRIWDTVMGQCQKILTSHTQSV 240

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-------------------LTNTL 301
            A ++  +G   L S  +D  +  +    Q     R                   L    
Sbjct: 241 TAVKWGGDG--LLYSSSQDRTIKAWR--AQDGVLCRTLQGHAHWVNTMALSTDYVLRTGA 296

Query: 302 FINISASYSP---DSSQIV--------FESDREGKEQ------------LYVMQSNGSDQ 338
           F    AS +P     S  V        +   R    +            L+         
Sbjct: 297 FNPADASVNPQDMSGSLEVLKEKALKRYNEVRGQGPERLVSGSDDFTLFLWAPAEEKKPL 356

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--- 395
           +R++   +A   + ++SP   +IA   F  +   +     DG   + L       +    
Sbjct: 357 QRMT-GHQALINEVLFSPDTRIIASASFD-KSIKLW----DGKTGKFLTSLRGHVSAVYQ 410

Query: 396 -TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVG 444
             WS   R L+       D+  K++    +   + LI+ P +A +     W  
Sbjct: 411 IAWSADSRLLV---SGSSDSTLKVWD---SKTKKLLIDLPGHADEVYSVDWSP 457


>gi|325190512|emb|CCA25010.1| WD40 repeatcontaining protein putative [Albugo laibachii Nc14]
          Length = 1085

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 83/266 (31%), Gaps = 22/266 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V   +++G       + +    N   +  + D  +    +S N   +  A +     +  
Sbjct: 493 VGRRLITGNSMGEFTLWNGVAFNFETILQAHDDAVRAMVWSHNDNWLITADH---GGVLK 549

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y   +  +   + I   R  + +  FS       +S   D  + ++  D +S   ER+  
Sbjct: 550 YWQPSMTN--VQLIQGHREAVRSLSFSPT-DFKFVSCSDDATVKVW--DFESGREERVLT 604

Query: 300 TLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               ++   +Y P    +   S       + +      +        + + F   W+  G
Sbjct: 605 GHGWDVKCVAYHPQKCLLASGSK---DNLVKIWDPKSGNSLNTLHGHKNTVFKVAWNQNG 661

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGS 416
           + +           I +      +E   ++    +  +  W P    L  S   DG    
Sbjct: 662 NWLLTASRDQ---LIKLYDIRTFKEITTLKGHTREVTSVAWHPCYERLFVSGSYDGSLMY 718

Query: 417 KLYSIDLNGRNETLINTPAYASDPQW 442
             + +   G++  L   P+   +  W
Sbjct: 719 --WEV---GKSTALATVPSAHENAVW 739



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 45/150 (30%), Gaps = 5/150 (3%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG   N + + D    N           +F+  ++ N   +  A+ D      + L D R
Sbjct: 624 SGSKDNLVKIWDPKSGNSLNTLHGHKNTVFKVAWNQNGNWLLTASRDQ----LIKLYDIR 679

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +    +      + +  +    +R  +S   D ++  + V   +      +       
Sbjct: 680 TFKEITTLKGHTREVTSVAWHPCYERLFVSGSYDGSLMYWEVGKSTALATVPSAHENAVW 739

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              + P    +V     +   + +     G
Sbjct: 740 DIQWHPVG-HVVATGSNDHSTKFWCRNRPG 768


>gi|297272382|ref|XP_002800420.1| PREDICTED: notchless protein homolog 1 [Macaca mulatta]
          Length = 443

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/334 (13%), Positives = 88/334 (26%), Gaps = 69/334 (20%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           TG+ +  G     V F  WD+   KQ+ G+                       ++ E   
Sbjct: 125 TGKYLASGSGDTTVRF--WDLSTGKQV-GRTLAGHSKW------------ITGLSWEPLH 169

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            N    +V+ S   G ++    + D        +     Q +   R+  +        Y 
Sbjct: 170 ANPECRYVASSSKDGSVR----IWDTTAGRCERILTGHTQSVTCLRWGGDG-----LLYS 220

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN------------------------ 268
                 + +         + +      +     S++                        
Sbjct: 221 ASQDRTIKVWRAHDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNAQDLQGSL 280

Query: 269 -----------------GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                            G   L+S   D  + ++S         R+T    +     +SP
Sbjct: 281 QELKERALSRYNLVRGHGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSP 340

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           DS  +   S     + + +            +   A+ +   WS    L+  +  S    
Sbjct: 341 DSRIVASASF---DKSIKLWDGRTGKYLGSLRGHVAAVYQIAWSADSRLLV-SGSSDSTL 396

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +  +K       L      + A  WSP G+ + 
Sbjct: 397 KVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVA 430



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 47/154 (30%), Gaps = 16/154 (10%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFI 303
           + R    +      +++  FS  GK    S   D  +  +  DL +       L      
Sbjct: 103 VTRCTSSLDGHSEAVISVAFSPTGKYLA-SGSGDTTVRFW--DLSTGKQVGRTLAGHSKW 159

Query: 304 NISASY-----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               S+     +P+   +   S ++G  +++   +     +RI      S     W   G
Sbjct: 160 ITGLSWEPLHANPECRYVA-SSSKDGSVRIW--DTTAGRCERILTGHTQSVTCLRWGGDG 216

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             + ++        +     DG   R L    + 
Sbjct: 217 --LLYSASQDRTIKVWRAH-DGVLCRTLQGHGHW 247


>gi|303320663|ref|XP_003070331.1| WD domain, G-beta repeat containing protein [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240110017|gb|EER28186.1| WD domain, G-beta repeat containing protein [Coccidioides posadasii
           C735 delta SOWgp]
          Length = 435

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 68/208 (32%), Gaps = 14/208 (6%)

Query: 193 LCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           + V D ++GA+  +   ++         SP+ +  A           VY+ D    R P 
Sbjct: 234 IKVWDLQNGAHQIHDFETKGSFGMCIDISPDGRFTA----SGHQSGSVYIFDNSTGRMPY 289

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYS 310
            +      + A  FS  GK         ++  I   +  S       +      +S  +S
Sbjct: 290 SLSGLVGPVRAVAFSPGGKLLA---AAGDSRVIMLYETSSGEQVANFSGHSAWIMSLDWS 346

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-GDLIAFTKFSGE 369
                ++  S  +GK +++ ++           + + + +   W P+ G    F   +G 
Sbjct: 347 HTGEYLLSGSF-DGKVKVWSIERKTCVATL--SESDKALWCVKWLPKMGKAEGFAT-AGA 402

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             +I   ++     +     S      W
Sbjct: 403 NRSIAFYREATGGLKRASAQSLNHTQAW 430


>gi|242011252|ref|XP_002426369.1| COMPASS component SWD2, putative [Pediculus humanus corporis]
 gi|212510446|gb|EEB13631.1| COMPASS component SWD2, putative [Pediculus humanus corporis]
          Length = 336

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 63/157 (40%), Gaps = 15/157 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +S  +  +L + D    N + L      +   P  + + + + +A   + D +++
Sbjct: 140 VEDTFLSASLDKTLRLWDLRSPNCQGLMH----LSGRPVAAYDPEGLIFAAGVNSDSVKL 195

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
           Y +   D       K            +FS +GK  LIS        I  +D  Q    +
Sbjct: 196 YDLRSFDKGPFITFKLNQEKECDWTGLKFSRDGKTILISTN---GSIIRLIDAFQGTPLQ 252

Query: 296 RLT---NTLFINISASYSPDSSQIVFESDREGKEQLY 329
             T   N   I I AS+SPD SQ VF    +G+  ++
Sbjct: 253 TFTGHLNNKGIPIEASFSPD-SQFVFSGSTDGRVHVW 288


>gi|156048464|ref|XP_001590199.1| hypothetical protein SS1G_08963 [Sclerotinia sclerotiorum 1980]
 gi|154693360|gb|EDN93098.1| hypothetical protein SS1G_08963 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 599

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 21/197 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           RFS + + VA        I  V          D +   +G+    I +  FS +G+    
Sbjct: 303 RFSHDGKFVATGCNRSAQIFDVITGTKVCVLQDDSVDAVGDL--YIRSVCFSPDGRYLA- 359

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +  +D+ + ++  D+ +       +    +  S  ++ D   I   S   G   + +   
Sbjct: 360 TGAEDKLIRVW--DIATRTIRNTFSGHEQDIYSLDFARDGRTIASGS---GDRTVRLWDI 414

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSN 391
             S    ++   E        SP    +A          + V         ERL   D +
Sbjct: 415 EASQNI-LTLSIEDGVTTVAISPDTKYVAAGSLDKS---VRVWDAATGYLVERLEGPDGH 470

Query: 392 ---LQAPTWSPSGRSLI 405
              + +  ++P+G+ L+
Sbjct: 471 KDSVYSVAFAPNGKDLV 487


>gi|320587236|gb|EFW99716.1| WD repeat protein [Grosmannia clavigera kw1407]
          Length = 532

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 64/187 (34%), Gaps = 30/187 (16%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P   Q +    FSP  +    AT   +   R++  DT   R    +   R  +LA  +S 
Sbjct: 145 PGHGQPILCVSFSPAGRGRWLATGSGDSTARIWDTDTGTPRHT--LKQHRGWVLAVAWSP 202

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP--------D----- 312
           +G R   +   D  + ++  D ++     + LT      ++ ++ P        D     
Sbjct: 203 DGSRLA-TCSMDGTVIVW--DPETGKPAGKELTGHSKPVLAVAWEPLHLVNSTGDRSSDY 259

Query: 313 -----SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
                  Q+   S ++G  +++   +N    + +      S     W   G  + ++   
Sbjct: 260 DANGPGPQLASAS-KDGTVRVWA--ANTGRCQYVLSGHRGSVSCVKW--GGTGLLYSASH 314

Query: 368 GEKFAIG 374
            +   + 
Sbjct: 315 DKTVRVW 321



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 52/157 (33%), Gaps = 12/157 (7%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGK-RALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
           + R   RI      IL   FS  G+ R L +   D    I+  D  +      L      
Sbjct: 137 VTRLAHRIPGHGQPILCVSFSPAGRGRWLATGSGDSTARIW--DTDTGTPRHTLKQHRGW 194

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            ++ ++SPD S++   S  +G   ++     G    +             W P    +  
Sbjct: 195 VLAVAWSPDGSRLATCS-MDGTVIVWD-PETGKPAGKELTGHSKPVLAVAWEP----LHL 248

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
              +G++ +      +G   +L     +     W+ +
Sbjct: 249 VNSTGDRSSDY--DANGPGPQLASASKDGTVRVWAAN 283



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 46/152 (30%), Gaps = 8/152 (5%)

Query: 270 KRALISVQKDEAMDIYS-VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           +  L S   D  M ++  +   +    R+          ++SPD    +F +        
Sbjct: 387 RERLASASDDFTMYLWDPMHQATKPVTRMVGHQKAINHVTFSPDG---LFVASSGWDNHT 443

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            + ++         +   A  +   WS    L+           +  ++       L   
Sbjct: 444 KIWRAKDGSFVSTLRGHVAPVYQCSWSADSRLLVTASKDATV-KVWNVRAAKLAADLPHH 502

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           +  + A  WSP G+ +        D   +L+ 
Sbjct: 503 EDEVYAVEWSPDGQRVA---SGGKDKAVRLWR 531



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 29/83 (34%), Gaps = 5/83 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G   ++  + D D    R+        +    +SP+  ++A  + D      V + D  
Sbjct: 167 TGSGDSTARIWDTDTGTPRHTLKQHRGWVLAVAWSPDGSRLATCSMDG----TVIVWDPE 222

Query: 246 IDRA-PKRIGNFRSMILAPRFSS 267
             +   K +      +LA  +  
Sbjct: 223 TGKPAGKELTGHSKPVLAVAWEP 245



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 46/114 (40%), Gaps = 9/114 (7%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F+   LFV+ S      K  +     DG+            +++  +S + + +  A+ D
Sbjct: 427 FSPDGLFVASSGWDNHTK--IWRAK-DGS-FVSTLRGHVAPVYQCSWSADSRLLVTASKD 482

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                 V + + R  +    + +    + A  +S +G+R   S  KD+A+ ++ 
Sbjct: 483 A----TVKVWNVRAAKLAADLPHHEDEVYAVEWSPDGQRVA-SGGKDKAVRLWR 531


>gi|299136603|ref|ZP_07029786.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
 gi|298601118|gb|EFI57273.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Acidobacterium sp. MP5ACTX8]
          Length = 828

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/278 (12%), Positives = 84/278 (30%), Gaps = 70/278 (25%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLM------------------DTRIDRAPKRIGNFRS-- 258
           +SP+ QK+A    D      +YL+                  D  +    + + +  +  
Sbjct: 223 WSPDSQKIATFQQDMRKTGDMYLVPVTYRHPVLDHWKGPMLGDKDVTMIERVVIDLPTGG 282

Query: 259 ---MILAPR----------------------FSSNGKRALISVQKDEAMDIY--SVDLQS 291
              + ++P                       FS++GK         +  D +    D  +
Sbjct: 283 MTRLKMSPDQHRSTICDDVSCRGGSGWDDVQFSADGKHLAFVSSSRDHKDAWLKVADTTT 342

Query: 292 NATERLTNT-------LFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                + +           + ++  Y P S++ ++ S+R    Q+Y+   N    K    
Sbjct: 343 GEIRDVYHEHVDSYFESGTDKVNWKYLPASNEFLWFSERTNFGQMYLYDLNTGQLKNQIT 402

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKF---------------AIGVMKKDGSQERLLVE 388
             +      +   +   + +   +G++                       DG  +RLL  
Sbjct: 403 HGDGPVTQVLHVDEKARVVYFLATGKESGKDPDHSPTRDPYFTYYYRASFDGKNQRLLTP 462

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +      T SP G++++          + +     +G+
Sbjct: 463 EDADHTVTPSPDGQTIVDIYSTPTTPKTAVLRSTADGK 500



 Score = 40.0 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 22/198 (11%), Positives = 49/198 (24%), Gaps = 52/198 (26%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN------TLFINISAS---------Y 309
            S +  +      +D  + ++  D+++    +LT+          + +           +
Sbjct: 168 VSPDKTKGAFI--RDWNLWLH--DMKTGQETQLTHDGVENYGYATDDAGWSHSDRAIVLW 223

Query: 310 SPDSSQIV-FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           SPDS +I  F+ D      +Y++         ++                  +   +   
Sbjct: 224 SPDSQKIATFQQDMRKTGDMYLVP--------VTYRHPVLDHWKGPMLGDKDVTMIERV- 274

Query: 369 EKFAIGVMKKDGSQERLL-----------------VEDSNLQAPTWSPSGRSLIFSRKKD 411
                 V+         L                    S      +S  G+ L F     
Sbjct: 275 ------VIDLPTGGMTRLKMSPDQHRSTICDDVSCRGGSGWDDVQFSADGKHLAFVSSSR 328

Query: 412 GDTGSKLYSIDLNGRNET 429
               + L   D       
Sbjct: 329 DHKDAWLKVADTTTGEIR 346


>gi|291614063|ref|YP_003524220.1| hypothetical protein Slit_1600 [Sideroxydans lithotrophicus ES-1]
 gi|291584175|gb|ADE11833.1| hypothetical protein Slit_1600 [Sideroxydans lithotrophicus ES-1]
          Length = 372

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 75/225 (33%), Gaps = 48/225 (21%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRAL----- 273
           SP+  K+ +         ++ +  T          ++ S       +  + K        
Sbjct: 166 SPDGSKILF----LGKAPQLSIKQTTTKWEFYWSHDWPSGTGGVAAWMPDSKTLFLGHRG 221

Query: 274 -ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE------ 326
              +Q+ +  D+ ++D+ S       N   I        DS + ++ S  + K       
Sbjct: 222 KFFLQRGQ--DLTTLDVMSPQ-----NFPAIV---QIKIDSQEHIYVSTTDTKTLAMMYQ 271

Query: 327 ---------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                    Q+  ++  GS    I+ D          S  G  + +   + +   +  + 
Sbjct: 272 LFKCSINLTQINCIKIAGSSAGVITFD---------VSQDGHQLVYV--NPDHSELYSVD 320

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               + + L E      P+ SP G +++F R + G+T     S+D
Sbjct: 321 IATQKTKRLAEKV-EGYPSISPDGGNVVFYRLRAGNTEGVGQSVD 364


>gi|146291782|ref|YP_001182206.1| peptidase S9B dipeptidylpeptidase IV subunit [Shewanella
           putrefaciens CN-32]
 gi|145563472|gb|ABP74407.1| peptidase S9B, dipeptidylpeptidase IV domain protein [Shewanella
           putrefaciens CN-32]
          Length = 760

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 87/303 (28%), Gaps = 93/303 (30%)

Query: 220 SPNQQKVAYA--TYDDEDILRVYLMDTRID-----------------------RAPKRIG 254
           SP+ Q+V Y     D+++   ++ MD +                         R  +RI 
Sbjct: 66  SPDGQRVTYLAGRKDNQNFYDLWQMDVKTGESSLLLNADKLATNELSDEEKARRERQRIY 125

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               M     ++ + K  LI    +    +Y   L  N   +L+        A  SP  +
Sbjct: 126 GEGIMEYF--WADDSKALLIPASGN----LYYFSLVDNRVSQLSIGEGFATDARLSPKGN 179

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQG 358
            + F  D    + LYV+       + ++ D   +  + +                W+P  
Sbjct: 180 FVSFVRD----QNLYVLDLATKKLEAMTTDGGGAIKNAMAEFVAQEEMDRMTGYWWAPDE 235

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------------------------ 394
             IAFT+       +    +  +    L E     A                        
Sbjct: 236 LAIAFTRIDESGVELVTRNEIYADGIKLTEQRYPYAGKNNVDIALGVVTLKDKAINWVTL 295

Query: 395 ----------PT--WSPSGRSLIF--SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                     P   W P  R L F    +       +L ++D   + +TL+         
Sbjct: 296 NDDKSKDIYLPRVNWLPDSRHLSFQWQSRDQHKLDLQLVALDALTKPKTLVK----ERSD 351

Query: 441 QWV 443
            WV
Sbjct: 352 AWV 354



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 63/194 (32%), Gaps = 55/194 (28%)

Query: 261 LAPR---FSSNGKRALISVQKDEA---MDIYSVDLQSNATERL-------TNTLFINISA 307
            +PR    S +G+R      + +     D++ +D+++  +  L       TN L     A
Sbjct: 58  TSPRGLKLSPDGQRVTYLAGRKDNQNFYDLWQMDVKTGESSLLLNADKLATNELSDEEKA 117

Query: 308 S---------------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                           ++ DS  ++  +       LY      +   ++S   E    D 
Sbjct: 118 RRERQRIYGEGIMEYFWADDSKALLIPA----SGNLYYFSLVDNRVSQLS-IGEGFATDA 172

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQA 394
             SP+G+ ++F +       + V+     +   +  D                    +  
Sbjct: 173 RLSPKGNFVSFVRDQ----NLYVLDLATKKLEAMTTDGGGAIKNAMAEFVAQEEMDRMTG 228

Query: 395 PTWSPSGRSLIFSR 408
             W+P   ++ F+R
Sbjct: 229 YWWAPDELAIAFTR 242



 Score = 43.9 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 97/311 (31%), Gaps = 66/311 (21%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR----------DGANI--- 203
           ++ D+    ++  +G      L    + VS +   +L V+D           DG      
Sbjct: 153 SLVDNRVSQLSIGEGFATDARLSPKGNFVSFVRDQNLYVLDLATKKLEAMTTDGGGAIKN 212

Query: 204 ---RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL-----RVYLMDTRIDRAPKRIGN 255
               ++       +    ++P++  +A+   D+  +       +Y    ++         
Sbjct: 213 AMAEFVAQEEMDRMTGYWWAPDELAIAFTRIDESGVELVTRNEIYADGIKLTEQRYPYAG 272

Query: 256 FRSMILA--------------------------PR--FSSNGKRALISVQKDEAMDIYSV 287
             ++ +A                          PR  +  + +      Q   + D + +
Sbjct: 273 KNNVDIALGVVTLKDKAINWVTLNDDKSKDIYLPRVNWLPDSRHLSFQWQ---SRDQHKL 329

Query: 288 DLQSNATERLTNTL-----------FINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           DLQ  A + LT               +N    +    S  ++ S+R+G   LY+    G 
Sbjct: 330 DLQLVALDALTKPKTLVKERSDAWVNLNNDLHFLKQQSAFIWASERDGFNHLYLFDLKGK 389

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQA 394
            + ++++ + A             + FT          +  +   G +   +   + +  
Sbjct: 390 LKTQLTKGEWAVDKLEYVDETAGWVYFTGRKDTPIEKQLYRVPLAGGKIERVSTKAGMHD 449

Query: 395 PTWSPSGRSLI 405
           P ++   +S+ 
Sbjct: 450 PVFA-DNQSVY 459


>gi|66816255|ref|XP_642137.1| actin related protein 2/3 complex, subunit 1 [Dictyostelium
           discoideum AX4]
 gi|74961019|sp|O96622|ARPC1_DICDI RecName: Full=Actin-related protein 2/3 complex subunit 1; AltName:
           Full=Arp2/3 complex 41 kDa subunit; AltName:
           Full=p41-Arc
 gi|4093163|gb|AAC99777.1| p41-Arc [Dictyostelium discoideum]
 gi|60470105|gb|EAL68085.1| actin related protein 2/3 complex, subunit 1 [Dictyostelium
           discoideum AX4]
          Length = 369

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 71/217 (32%), Gaps = 32/217 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++ ++ +VA     + + + +Y            +     ++ +  ++    R L +  
Sbjct: 17  AWNADRSRVALC--PNNNEVHIYAKQGTSWVVEHVLAEHDQLVTSIDWAPKTNRIL-TSS 73

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSN 334
           +D    +++   +    + +   L IN +A+   +SP  ++        G + + +    
Sbjct: 74  QDRNAYVWTF--KDGQWKPVLVLLRINRAATHVKWSPQENKFAVA---TGAKLVCICFFE 128

Query: 335 GS----DQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVE 388
                     I +  +++     W P   L+A +        F   + K DG        
Sbjct: 129 EEHDWWASNHI-KKHKSTVLKVDWHPNNLLLATSSSDYKVRVFDAYIKKADGRSVTRPYG 187

Query: 389 DSNLQAPT--------------WSPSGRSLIFSRKKD 411
           +     P               WSPSG +L +S    
Sbjct: 188 EVAFGEPVFEFDQCASWVHALKWSPSGSTLAYSSHDG 224


>gi|319949386|ref|ZP_08023454.1| WD-40 repeat protein [Dietzia cinnamea P4]
 gi|319436951|gb|EFV92003.1| WD-40 repeat protein [Dietzia cinnamea P4]
          Length = 545

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 56/200 (28%), Gaps = 11/200 (5%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--LQSNATERLTNTLFINISA 307
           P R   F   +     S +G R + +   D  + +++      +     L  T  + ++ 
Sbjct: 251 PGRDTRFSGSV---AMSPDG-RVVYAGLADGGVQVFTAPYGPATRPVASLPVTSGVVVAN 306

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             SPD   +   SD      L  +        R++           +S     +      
Sbjct: 307 PLSPDGRTLAVCSDTSPDLGLVDVTDPTRPALRVTVPLPDPCVVAEFSSDSRQLVVPTLG 366

Query: 368 GEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +   +     D      RL        +  ++     L       GD   +L+ +    
Sbjct: 367 PQTVILDTADPDRPVVAHRLTTGIGASPSAGYAHHPPLLA---TSGGDKTVRLWDVSDAS 423

Query: 426 RNETLINTPAYASDPQWVGF 445
               L +  A   +  W  F
Sbjct: 424 APAELASFAAPPGEIYWTAF 443



 Score = 36.5 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 45/129 (34%), Gaps = 6/129 (4%)

Query: 194 CVMDRDGANIR---YLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            V+D  G   R    + P RD         SP+  +V YA   D  +           R 
Sbjct: 234 TVVDTTGPVPRETGRVIPGRDTRFSGSVAMSPDG-RVVYAGLADGGVQVFTAPYGPATRP 292

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISAS 308
              +     +++A   S +G+   +       + +  V   +    R+T       + A 
Sbjct: 293 VASLPVTSGVVVANPLSPDGRTLAVCSDTSPDLGLVDVTDPTRPALRVTVPLPDPCVVAE 352

Query: 309 YSPDSSQIV 317
           +S DS Q+V
Sbjct: 353 FSSDSRQLV 361


>gi|260795733|ref|XP_002592859.1| hypothetical protein BRAFLDRAFT_201703 [Branchiostoma floridae]
 gi|229278083|gb|EEN48870.1| hypothetical protein BRAFLDRAFT_201703 [Branchiostoma floridae]
          Length = 1316

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 52/153 (33%), Gaps = 7/153 (4%)

Query: 275  SVQKDEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             ++ D +  ++S+ +Q +    L N    ++           +      +   +++ + +
Sbjct: 984  VLEIDLSNGLFSILVQGHTGTHLENEVWGLDTHPK-----KHLCVTVSDDKTLRVWDLAA 1038

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            + S   R  + +  +     +SP GDLIA     G          + +  +       + 
Sbjct: 1039 DQSQLTRARKLRTGART-CAFSPDGDLIAVGMNDGGFVMFHCGNLEAASPQFRHRKEKIS 1097

Query: 394  APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               +SP G+ +      +      +Y +   G 
Sbjct: 1098 DLKFSPDGKYIAVGSHDNFVDVYNVYKMKRTGT 1130


>gi|212543277|ref|XP_002151793.1| meiotic recombination protein Ski8/Rec14, putative [Penicillium
           marneffei ATCC 18224]
 gi|210066700|gb|EEA20793.1| meiotic recombination protein Ski8/Rec14, putative [Penicillium
           marneffei ATCC 18224]
          Length = 222

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 9/113 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + +A           +Y+      R P  +      + A  FS  GK         
Sbjct: 69  SNDGKYIA----SGHQNGSIYMFSNETGRMPFSLSGLIKPVRAVAFSPGGKLLA---AAG 121

Query: 280 EAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           ++  I   D +S     +LT      +S  +S     ++  S  +GK +++ +
Sbjct: 122 DSKVIVLYDTESGEQVTQLTGHSAWILSLDWSHTGEYLLSASF-DGKVKVWSV 173


>gi|156039563|ref|XP_001586889.1| hypothetical protein SS1G_11918 [Sclerotinia sclerotiorum 1980]
 gi|154697655|gb|EDN97393.1| hypothetical protein SS1G_11918 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 714

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/346 (12%), Positives = 108/346 (31%), Gaps = 57/346 (16%)

Query: 88  KQKITNPDSIPRFQDWNSL-----GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
             K  N D++   + W ++     GA+  V GR +++ +    +++   +    + +  +
Sbjct: 94  PSKDENGDAVKNLKIWRTVEDVAEGAEKEVVGRFVQKSQTGWNLQYTFDEKYCARNVTNE 153

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
             F      R + + +  +         G+  S  +F+ E                    
Sbjct: 154 VQFYESGDLRTVWNKLRVEGVADFAISPGNNYSVAVFIPERKGQ---------------- 197

Query: 203 IRYLTPSRDQILFEPRF-SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
                PS  ++   P+F +P  QK  +      D +++               +      
Sbjct: 198 -----PSAVKVFNVPQFNAPVSQKTFF----KGDKVQLKWNQLGTTLIVLAQTDVDKSNK 248

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI-VFE 319
                                 +Y +        R+T +        S+SP+S +  V  
Sbjct: 249 ---------------SYYGETTLYVLSANGGFDSRITLDKEGPIHDVSWSPNSKEFGVIY 293

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                K  ++  ++  +   ++           ++SP G  +    F      + +   +
Sbjct: 294 GYMPAKTTIFNQRAVATHTFQL-----GPRNTILFSPTGRFVLVAGFGNLAGQMDIYDLE 348

Query: 380 GSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
              +++  +E  N     WSP  + ++ +        D G +L+ +
Sbjct: 349 KDYKKICTIEGGNPSVCEWSPDSKYILTATTSPRLRVDNGVRLWHV 394



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 47/130 (36%), Gaps = 21/130 (16%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-- 381
           G+  LYV+ +NG    RI+ DKE    D  WSP                 G M    +  
Sbjct: 252 GETTLYVLSANGGFDSRITLDKEGPIHDVSWSPNSKEFGVI--------YGYMPAKTTIF 303

Query: 382 QERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            +R +   +    P     +SP+GR ++ +   +      +Y ++ + +    I      
Sbjct: 304 NQRAVATHTFQLGPRNTILFSPTGRFVLVAGFGNLAGQMDIYDLEKDYKKICTI----EG 359

Query: 438 SDPQ---WVG 444
            +P    W  
Sbjct: 360 GNPSVCEWSP 369


>gi|6679749|ref|NP_032012.1| seprase [Mus musculus]
 gi|20140020|sp|P97321|SEPR_MOUSE RecName: Full=Seprase; AltName: Full=Fibroblast activation protein
           alpha; AltName: Full=Integral membrane serine protease
 gi|1743330|emb|CAA71116.1| fibroblast activation protein [Mus musculus]
 gi|123232969|emb|CAM21614.1| fibroblast activation protein [Mus musculus]
 gi|148695043|gb|EDL26990.1| fibroblast activation protein [Mus musculus]
          Length = 761

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 49/160 (30%), Gaps = 34/160 (21%)

Query: 310 SPDSSQIVFESDREGKEQL------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD   +  ESD     +       Y+      +  R   +         WSP G  +A+
Sbjct: 106 SPDRQFVYLESDYSKLWRYSYTATYYIYDLQNGEFVR-GYELPRPIQYLCWSPVGSKLAY 164

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--------------------APTWSPSGRS 403
              +     I + ++ G     +                           A  WSP G+ 
Sbjct: 165 VYQN----NIYLKQRPGDPPFQITYTGRENRIFNGIPDWVYEEEMLATKYALWWSPDGKF 220

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTP---AYASDP 440
           L +    D D     YS   +G+    IN P   A A +P
Sbjct: 221 LAYVEFNDSDIPIIAYSYYGDGQYPRTINIPYPKAGAKNP 260


>gi|258569817|ref|XP_002543712.1| sepB protein [Uncinocarpus reesii 1704]
 gi|237903982|gb|EEP78383.1| sepB protein [Uncinocarpus reesii 1704]
          Length = 720

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/225 (18%), Positives = 83/225 (36%), Gaps = 27/225 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S ++  +A A+ D    L V +++       K + +    +    F  +G+    S  
Sbjct: 33  AISKDKDWIAVASDD----LTVKIVNIEDMSHVKYLRDQTKGVKHVTFDPSGRYVTASCS 88

Query: 278 KDEAMDIYSVDLQS---------NATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            D  + +YS  +++            +RL         A++ PD +   F +    K+ +
Sbjct: 89  -DGVIYVYSF-IETEPTLVKKIDGVIQRLETEDEGTSQAAWHPDGT--AFAAVGATKDIV 144

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-- 386
            V   + + QK+ +    A      WSP G L+A     G      ++  +   + +L  
Sbjct: 145 VVSSRDWTTQKKFANGHTADITALAWSPNGALLASAGADG-----YIVLWETRTQNILRK 199

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            E SN+    W P    L F+     D    +Y+  +    + L+
Sbjct: 200 YEFSNVINLAWHPVDNELSFTTS---DGELYIYANFVPSEYQRLL 241


>gi|257070137|ref|YP_003156392.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Brachybacterium
           faecium DSM 4810]
 gi|256560955|gb|ACU86802.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Brachybacterium
           faecium DSM 4810]
          Length = 702

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 40/115 (34%), Gaps = 9/115 (7%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFES--------DREGKEQLYVMQSNGSDQKRISQ 343
           +A  R+T +         SPD SQI + S        D        +M  +  + + I+ 
Sbjct: 213 SALRRVTPSSRFVAHPRVSPDGSQIAWISWEHPLMPWDGTRLHLAPLMNGSAGEGEIIAG 272

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            ++ S   P W      + F   S   +   V   DG   +LL  D       W+
Sbjct: 273 GEDVSVLQPEWLDD-QRLMFLADSSGWWNPWVWSADGGARQLLELDQEFAGAMWA 326



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 52/148 (35%), Gaps = 39/148 (26%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D + +R +TPS  + +  PR SP+  ++A+ +++   +                      
Sbjct: 211 DPSALRRVTPS-SRFVAHPRVSPDGSQIAWISWEHPLMPW-------------------- 249

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
                    +G R  ++   + +     +         L           +  D  +++F
Sbjct: 250 ---------DGTRLHLAPLMNGSAGEGEIIAGGEDVSVL--------QPEWL-DDQRLMF 291

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKE 346
            +D  G    +V  ++G  ++ +  D+E
Sbjct: 292 LADSSGWWNPWVWSADGGARQLLELDQE 319


>gi|156383749|ref|XP_001632995.1| predicted protein [Nematostella vectensis]
 gi|156220059|gb|EDO40932.1| predicted protein [Nematostella vectensis]
          Length = 497

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/227 (14%), Positives = 67/227 (29%), Gaps = 17/227 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
              +  +  + D +  +++           +  +  N    A  + D      +++    
Sbjct: 265 GAGVDKACIIWDANTWDVKQQFAFHQAPTLDVDWQNN-NSFASCSTDK----LIHVCRLG 319

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-------DLQSNATERLT 298
           +D+  K      S + A R+  +G     S   D +  ++S+       DLQ +  E  T
Sbjct: 320 LDKPIKSFRGHMSEVNAIRWDPSGTLLA-SCSDDMSAKVWSLKEDMCVHDLQGHKKEIYT 378

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            T         S + S  +  +       + +         ++        +   +SP G
Sbjct: 379 ITWSP-TGPG-SANPSAPLLLASASYDTTVRLWDVERGGCLQVLSKHHEPVYTISFSPDG 436

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +A   F             G+          +    WSP G  L 
Sbjct: 437 RYLASGSFDKRVHIWSTQ--TGNLVHSFQGSGGIFEVQWSPRGDKLA 481



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/106 (12%), Positives = 39/106 (36%), Gaps = 8/106 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D +      +     + ++   FSP+ + +A  ++D     RV++  T+
Sbjct: 399 SASYDTTVRLWDVERGGCLQVLSKHHEPVYTISFSPDGRYLASGSFDK----RVHIWSTQ 454

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                        +    ++S  G +       +    +  +D+++
Sbjct: 455 TGNLVHSFQGSGGI-FEVQWSPRGDKLAACFSNN---TLCVIDVRT 496


>gi|327301537|ref|XP_003235461.1| periodic tryptophan protein 2 [Trichophyton rubrum CBS 118892]
 gi|326462813|gb|EGD88266.1| periodic tryptophan protein 2 [Trichophyton rubrum CBS 118892]
          Length = 911

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/207 (13%), Positives = 80/207 (38%), Gaps = 19/207 (9%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           +  +    + ++ + + + +    +       + A  +S +G++  I+   D  + ++  
Sbjct: 307 WLAFGSSKLGQLLVWEWQSESYILKQQGHLGSMNALVYSPDGRKI-ITAADDGKIKVW-- 363

Query: 288 DLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           D+++       T       +  ++   + ++F +  +G  + + +     + K  +    
Sbjct: 364 DIKTGFCIVTFTEHKSGVTACEFTKRGN-VLFTASLDGSVRAWDL-VRYRNFKTFTAPSR 421

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGR 402
            S+      P G+++         F I +        +LL + S  + P    ++S  G 
Sbjct: 422 LSFSSLAVDPSGEIVCAGSLD--SFDIHIWSVQTG--QLLDQLSGHEGPVSSLSFSADGS 477

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNET 429
            ++ +     D   +++SI   GR++T
Sbjct: 478 HVVSASW---DRTVRIWSIF--GRSQT 499



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 67/197 (34%), Gaps = 13/197 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ +K+  A  D +    + + D +           +S + A  F+  G   L +   
Sbjct: 344 YSPDGRKIITAADDGK----IKVWDIKTGFCIVTFTEHKSGVTACEFTKRGN-VLFTASL 398

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++    +  T    ++ S S + D S  +  +       +++        
Sbjct: 399 DGSVRAWDL-VRYRNFKTFTAPSRLSFS-SLAVDPSGEIVCAGSLDSFDIHIWSVQTGQL 456

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLLVEDSNLQAPT 396
                  E       +S  G  +    +      I  +  +   S+   L   S++    
Sbjct: 457 LDQLSGHEGPVSSLSFSADGSHVVSASWD-RTVRIWSIFGRSQTSEPLQL--QSDVLCVA 513

Query: 397 WSPSGRSLIFSRKKDGD 413
           + P G+ +  +   DG 
Sbjct: 514 FRPDGKQIA-ASTLDGQ 529



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 5/81 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  +    FS +   V  A++D      V +               +S +L   F 
Sbjct: 460 LSGHEGPVSSLSFSADGSHVVSASWDR----TVRIWSIFGRSQTSEPLQLQSDVLCVAFR 515

Query: 267 SNGKRALISVQKDEAMDIYSV 287
            +GK+   +   D  +  +SV
Sbjct: 516 PDGKQIA-ASTLDGQLTFWSV 535



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D   +++   +  +   ++      + +  FS++G   ++S   D  + I+S+  +S  +
Sbjct: 442 DSFDIHIWSVQTGQLLDQLSGHEGPVSSLSFSADGSH-VVSASWDRTVRIWSIFGRSQTS 500

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           E L       +  ++ PD  QI   S  +G+   + +
Sbjct: 501 EPL-QLQSDVLCVAFRPDGKQIA-ASTLDGQLTFWSV 535



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 73/230 (31%), Gaps = 23/230 (10%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSP 221
           + +I       +SR L       S  +   +  +D + G     L   RD ++    FS 
Sbjct: 151 FDTIQNIHWSSDSRFLL----TASKDLTARIWSVDPEEGFEPTTLAGHRDGVINA-WFSH 205

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKR----------IGNFRSMILAPRFSSNGKR 271
           +Q+ +   + D       Y+  T+ D +                  S +    F +    
Sbjct: 206 DQESIYTISKDGALFRWGYVSRTKEDGSSTDERWRIVKKDYFLQSGSKVNCAAFHAKAN- 264

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L+    +    ++ +    +    L+ +       + +  S  + F S + G+  ++  
Sbjct: 265 ILVVGFSNGIFGLWEMP-SFSQLHLLSVSQSNIDCVTINSSSEWLAFGSSKLGQLLVWEW 323

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           QS     K+  Q    S    V+SP G  I      G    I V      
Sbjct: 324 QSESYILKQ--QGHLGSMNALVYSPDGRKIITAADDG---KIKVWDIKTG 368


>gi|302852860|ref|XP_002957948.1| hypothetical protein VOLCADRAFT_68766 [Volvox carteri f.
           nagariensis]
 gi|300256714|gb|EFJ40974.1| hypothetical protein VOLCADRAFT_68766 [Volvox carteri f.
           nagariensis]
          Length = 944

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 73/233 (31%), Gaps = 15/233 (6%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +    +      +  Q L    FSP+   +A       +  +V +          
Sbjct: 392 QLLVWEWRSESYVLKQQAHQQDLTAAAFSPDGAMIA----TGGEDCKVKVFQQSTGFCFV 447

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYS 310
                 + + A  F  +G   L+S   D ++  + + ++      LT+ T     S +  
Sbjct: 448 TFSEHTAPVTAVTFLPSGA-VLLSASLDGSVRAWDL-VRYRNFRTLTSPTPAQYGSLAVD 505

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P    +V  +      Q+YV          +    E       +SP   L+A   +    
Sbjct: 506 PGGEVVV--AGAVDTFQIYVWSLRTGRLLDVLSGHEGPITGLAFSPVTSLLASASWDRTV 563

Query: 371 FAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               V    GS    +L    ++ A      GR L  +   DG     +Y  D
Sbjct: 564 RMWDVYDSGGSGSSDVLDHRHDVLAIAMRADGRQLA-AATADG----SIYLWD 611



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 33/211 (15%), Positives = 62/211 (29%), Gaps = 32/211 (15%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +  L+ SR++I     F+     +A        +L   + + R +    +    +  +
Sbjct: 359 TRLHTLSISRERITSL-SFNHTGDWLAVGCARLGQLL---VWEWRSESYVLKQQAHQQDL 414

Query: 261 LAPRFSSNGKRALI--------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            A  FS +G               Q+       +    +     +T      +  S S D
Sbjct: 415 TAAAFSPDGAMIATGGEDCKVKVFQQSTGFCFVTFSEHTAPVTAVTFLPSGAVLLSASLD 474

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            S   ++  R                + ++    A Y      P G+++         F 
Sbjct: 475 GSVRAWDLVRYRNF------------RTLTSPTPAQYGSLAVDPGGEVVVAGAVD--TFQ 520

Query: 373 IGVMKKDGSQERLLVEDSNLQAP----TWSP 399
           I V        RLL   S  + P     +SP
Sbjct: 521 IYVWSLRTG--RLLDVLSGHEGPITGLAFSP 549


>gi|297744245|emb|CBI37215.3| unnamed protein product [Vitis vinifera]
          Length = 460

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 6/138 (4%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEA 347
           + +   + LT          +S +   +   S R+    ++ +  NG    R + Q  + 
Sbjct: 150 IPTQTVQILTEHKHEVWFVQFSHNGEYLA-SSSRDCAAIIWKVLENGVLILRHMLQSHQN 208

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                 WSP  D +  T  +GE   +  ++    +         + +  W P  + ++  
Sbjct: 209 PVSFVAWSPD-DTMLLTCGNGEVLKLWDVETGTCKHTFGDHGFIVSSCAWFPDSKRIVCG 267

Query: 408 RKKDGDTGSKLYSIDLNG 425
                D    +Y  D +G
Sbjct: 268 SS---DPEKGIYMWDCDG 282



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/237 (11%), Positives = 73/237 (30%), Gaps = 57/237 (24%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R++  S    +    +SP+   +        +   + L D          G+   ++ +
Sbjct: 199 LRHMLQSHQNPVSFVAWSPDDTMLLTC----GNGEVLKLWDVETGTCKHTFGDHGFIVSS 254

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             +  + KR +     D    IY  D   N  +            ++             
Sbjct: 255 CAWFPDSKRIV-CGSSDPEKGIYMWDCDGNEIK------------AW------------- 288

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G     V+                       +P G+ +        +  I ++    + 
Sbjct: 289 KGMRMPKVLDL-------------------AVTPDGENLISI---FSEKEIRILNVGTNA 326

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           E ++ ED ++ + + S   + LI +   +     +++  D+ G+ E  +    +  +
Sbjct: 327 EHVISEDYSITSLSVSRDSKFLIVNLNSE-----EIHMWDVAGKWEKPLKYTGHKQN 378


>gi|225437937|ref|XP_002268789.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 520

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 47/138 (34%), Gaps = 6/138 (4%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEA 347
           + +   + LT          +S +   +   S R+    ++ +  NG    R + Q  + 
Sbjct: 210 IPTQTVQILTEHKHEVWFVQFSHNGEYLA-SSSRDCAAIIWKVLENGVLILRHMLQSHQN 268

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                 WSP  D +  T  +GE   +  ++    +         + +  W P  + ++  
Sbjct: 269 PVSFVAWSPD-DTMLLTCGNGEVLKLWDVETGTCKHTFGDHGFIVSSCAWFPDSKRIVCG 327

Query: 408 RKKDGDTGSKLYSIDLNG 425
                D    +Y  D +G
Sbjct: 328 SS---DPEKGIYMWDCDG 342



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/237 (11%), Positives = 73/237 (30%), Gaps = 57/237 (24%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R++  S    +    +SP+   +        +   + L D          G+   ++ +
Sbjct: 259 LRHMLQSHQNPVSFVAWSPDDTMLLTC----GNGEVLKLWDVETGTCKHTFGDHGFIVSS 314

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             +  + KR +     D    IY  D   N  +            ++             
Sbjct: 315 CAWFPDSKRIV-CGSSDPEKGIYMWDCDGNEIK------------AW------------- 348

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G     V+                       +P G+ +        +  I ++    + 
Sbjct: 349 KGMRMPKVLDL-------------------AVTPDGENLISI---FSEKEIRILNVGTNA 386

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           E ++ ED ++ + + S   + LI +   +     +++  D+ G+ E  +    +  +
Sbjct: 387 EHVISEDYSITSLSVSRDSKFLIVNLNSE-----EIHMWDVAGKWEKPLKYTGHKQN 438


>gi|73958113|ref|XP_862133.1| PREDICTED: similar to Eukaryotic translation initiation factor 3
           subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b)
           isoform 5 [Canis familiaris]
          Length = 741

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 85/256 (33%), Gaps = 21/256 (8%)

Query: 203 IRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            R+       I F P  R+S + +  A  T D   I     M   +D+   +I   +   
Sbjct: 340 QRFSHQGVQLIDFSPCERWSHDGKFFARMTLDTLSIYETPSMGL-LDKKSLKISGIKDF- 397

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTN-TLFINISASYSPDSSQIV 317
               +S  G      V +D+ +      + L +    R+ N    ++    +  +   + 
Sbjct: 398 ---SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLC 454

Query: 318 FESDRE--GKEQLY----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            + DR   G + +     + +           + + +     W P G   A       + 
Sbjct: 455 VKVDRTPKGTQGVVTNFEIFRMREKQVPVDVVEMKETIIAFAWEPNGSKFAVLHGEAPRI 514

Query: 372 AI--GVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           ++    +K +G  E + + +        WSP G+ ++ +  +       L  +D +    
Sbjct: 515 SVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRS--MNGALAFVDTSDCTV 572

Query: 429 TLINTPAYASDPQWVG 444
             I     ASD +W  
Sbjct: 573 MNIAEHYMASDVEWDP 588



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 50/171 (29%), Gaps = 28/171 (16%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 260 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 311

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISA--SYSPD 312
                R+S  G       Q+            +   S+   +L     I+ S    +S D
Sbjct: 312 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQL-----IDFSPCERWSHD 361

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                    R   + L + ++           K +   D  WSP G++IAF
Sbjct: 362 GKFFA----RMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAF 408


>gi|331245632|ref|XP_003335452.1| hypothetical protein PGTG_17305 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gi|309314442|gb|EFP91033.1| hypothetical protein PGTG_17305 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 643

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 104/311 (33%), Gaps = 48/311 (15%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD--IYQSITGEKGDF 173
           V    +       RLWD+   +++      S       +     D+  + + ++GE   F
Sbjct: 108 VKPTVEGAQHKNMRLWDITTGEEVASFSQKSQEG---WMIQFTEDESRVLRLVSGEVQVF 164

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           +        S  SG++      +  +G +   L+P ++ +L            A+     
Sbjct: 165 DP------MSFDSGVVSK----LKLEGMSEFKLSPGKNPLLS-----------AFVAEKK 203

Query: 234 EDILRVYLMDT----RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---------E 280
                V +              +   F++  +  +++ +G   LI  Q D          
Sbjct: 204 GAPASVKIYPLAGLKDSTPPLTQKTFFKADKIQMKWNRSGTSVLILTQTDVDKTGKSYYG 263

Query: 281 AMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSNGSD 337
             ++Y +        R+T      I+    +SP+  +  V       K  ++ ++ N   
Sbjct: 264 ETNLYMLSANGQFDCRVTLDREGGIHDF-VWSPNDKEFTVSYGYMPAKTTIFDLRCN--- 319

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              I     A      ++PQG L+    F      + +  +   ++   +E SN     W
Sbjct: 320 --VIHDFGTAPRNFISYNPQGRLLLIAGFGNLAGTMDIWDRRTLEKVATIEGSNTSHCEW 377

Query: 398 SPSGRSLIFSR 408
           SP GR ++ + 
Sbjct: 378 SPDGRFIMCAT 388


>gi|226286982|gb|EEH42495.1| dipeptidyl-peptidase [Paracoccidioides brasiliensis Pb18]
          Length = 700

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 75/233 (32%), Gaps = 53/233 (22%)

Query: 220 SPNQQKVAYATYDDEDI------LRVYLMDTRIDRAPKRIGNFRSMILA---------PR 264
           SP+ + VA+ T   E          +Y++          I    S + A         P 
Sbjct: 210 SPDGKTVAFMTKAPELPKANYTTSYIYVVPHDGASTAVPINGPDSSVAADGIVGASSNPV 269

Query: 265 FSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISAS---YSPDSSQI 316
           FS + K+      ++   +     IY   L +     + +    + S     ++PD +  
Sbjct: 270 FSPDSKKLAYFQMEEYNYESDRRVIYVATLSNKKIVSIASN--WDRSPESIKWTPDGANF 327

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              S+   + +L+ +  N            A Y    ++  G + AF   +         
Sbjct: 328 YILSEDRARSRLFTLPVN----------ARADYVPKNFTDNGMVSAFHFLNNS------- 370

Query: 377 KKDGSQERLLVEDSNLQAPTW----SPSGR-SLIFSRKKDGDTGSKLYSIDLN 424
                   +L   S L + +     +P  +  ++FS  +     + L   D++
Sbjct: 371 ------PSVLTTTSTLWSNSIYAIVAPDEKPKVLFSANEHDPELAGLGPEDID 417



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 77/224 (34%), Gaps = 25/224 (11%)

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
            +     +I +      +  W +     + +G + K    +       +D K +  +   
Sbjct: 137 PKQLSSARIYDSLWPRHWDTWLTTEFNAVFSGSLKKGYGGKYT-----FDGKLKNLVAPV 191

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           K+  SP         +S D   S  G+   F ++     E   +    + + V+  DGA+
Sbjct: 192 KYAESPYP----PFGVSSDYDLSPDGKTVAFMTK---APELPKANYTTSYIYVVPHDGAS 244

Query: 203 IRYLTPSRDQIL---------FEPRFSPNQQKVAYATYD----DEDILRVYLMDTRIDRA 249
                   D  +           P FSP+ +K+AY   +    + D   +Y+      + 
Sbjct: 245 TAVPINGPDSSVAADGIVGASSNPVFSPDSKKLAYFQMEEYNYESDRRVIYVATLSNKKI 304

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                N+     + +++ +G    I  +      ++++ + + A
Sbjct: 305 VSIASNWDRSPESIKWTPDGANFYILSEDRARSRLFTLPVNARA 348



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 25/126 (19%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVEDSNLQA- 394
                   D   SP G  +AF   + E          I V+  DG+   + +   +    
Sbjct: 198 YPPFGVSSDYDLSPDGKTVAFMTKAPELPKANYTTSYIYVVPHDGASTAVPINGPDSSVA 257

Query: 395 ----------PTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDP- 440
                     P +SP  + L + + ++ +  S    +Y   L+ +    I +  +   P 
Sbjct: 258 ADGIVGASSNPVFSPDSKKLAYFQMEEYNYESDRRVIYVATLSNKKIVSIASN-WDRSPE 316

Query: 441 --QWVG 444
             +W  
Sbjct: 317 SIKWTP 322



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 45/152 (29%), Gaps = 37/152 (24%)

Query: 310 SPDSSQIVFESDREGKEQ-------LYVMQSNGSDQKRISQDKE---------ASYFDPV 353
           SPD   + F +      +       +YV+  +G+         +          +  +PV
Sbjct: 210 SPDGKTVAFMTKAPELPKANYTTSYIYVVPHDGASTAVPINGPDSSVAADGIVGASSNPV 269

Query: 354 WSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIF 406
           +SP    +A+ +     +      I V      +   +  + +    +  W+P G     
Sbjct: 270 FSPDSKKLAYFQMEEYNYESDRRVIYVATLSNKKIVSIASNWDRSPESIKWTPDG----- 324

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                    +  Y +  +     L   P  A 
Sbjct: 325 ---------ANFYILSEDRARSRLFTLPVNAR 347


>gi|224587677|gb|ACN58698.1| Notchless protein homolog 1 [Salmo salar]
          Length = 381

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 43/135 (31%), Gaps = 8/135 (5%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  + +++         RLT    +     +SPD+  +   S     + + +  
Sbjct: 240 LVSGSDDFTLFLWNPAEDKKPLARLTGHSALVNEVLFSPDTRLLASASF---DKSIKIWD 296

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                  +  +   A+ +   WS    L+           + V      +    +     
Sbjct: 297 GRTGKYLQSLRGHVAAVYQVAWSADSRLMVSGSSDST---LKVWDIKTGKLHTDLPGHAD 353

Query: 393 QAPT--WSPSGRSLI 405
           +     WSP G+ ++
Sbjct: 354 EVFAVDWSPDGQRVV 368



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 24/175 (13%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINI 305
           R    +      +++  FS  GK    S   D  +  + +   +  T + T+       +
Sbjct: 1   RCTSSLQGHTEAVISAAFSPTGKYLA-SGSGDTTVRFWDL---TTETPQHTSRGHSHWVL 56

Query: 306 SASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEA------SYFDPVWSPQ 357
           + S+SPD  ++       G    Q+ +       Q   +           S+     +P+
Sbjct: 57  TISWSPDGRKLA-----SGCKNSQICIWDPVTGLQMGKTLTGHTKWITWISWEPLHLNPE 111

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKD 411
              +A +   G      V+   G  ER+L     ++    W   G  L+++  +D
Sbjct: 112 CRYLASSSKDGAVRVWDVVL--GRCERILTGHTQSVTCVKWGGDG--LLYTSSQD 162



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 47/133 (35%), Gaps = 8/133 (6%)

Query: 232 DDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L +   D+ P  R+    +++    FS +  R L S   D+++ I+  D +
Sbjct: 242 SGSDDFTLFLWNPAEDKKPLARLTGHSALVNEVLFSPD-TRLLASASFDKSIKIW--DGR 298

Query: 291 SNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           +    + L   +      ++S DS  +V  S       L V                   
Sbjct: 299 TGKYLQSLRGHVAAVYQVAWSADSRLMVSGSS---DSTLKVWDIKTGKLHTDLPGHADEV 355

Query: 350 FDPVWSPQGDLIA 362
           F   WSP G  + 
Sbjct: 356 FAVDWSPDGQRVV 368



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 23/177 (12%), Positives = 53/177 (29%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D      ++ +      +    +SP+ +K+A      ++          
Sbjct: 27  SGSGDTTVRFWDLTTETPQHTSRGHSHWVLTISWSPDGRKLA---SGCKNSQICIWDPVT 83

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  K +      I    +     +   +    S  KD A+ ++ V +       LT  
Sbjct: 84  GLQMGKTLTGHTKWITWISWEPLHLNPECRYLA-SSSKDGAVRVWDV-VLGRCERILTGH 141

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ S ++    + V ++    Q R  Q           S  
Sbjct: 142 TQSVTCVKWGGDG--LLYTSSQD--RTVKVWRAKDGVQCRTLQGHAHWVNTLALSTD 194



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/202 (13%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV-IKEGKDRLRVEFRLWDV 133
           R+  F         Q  T      + +          V G    +           LW+ 
Sbjct: 198 RTGAFEPADATINPQDQTGTFEELKEKALQRYNK---VRGEAPERLVSGSDDFTLFLWNP 254

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H  S  + + +       ++R+L       S     S+
Sbjct: 255 AEDKKPLA----------RLTGH--SALVNEVLFSP----DTRLL------ASASFDKSI 292

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 293 KIW--DGRTGKYLQSLRGHVAAVYQVAWSADSRLMVSGSSDS----TLKVWDIKTGKLHT 346

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R +
Sbjct: 347 DLPGHADEVFAVDWSPDGQRVV 368


>gi|195044520|ref|XP_001991838.1| GH11853 [Drosophila grimshawi]
 gi|193901596|gb|EDW00463.1| GH11853 [Drosophila grimshawi]
          Length = 445

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 4/103 (3%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++ D + +   S   G   + +  ++    + + +    S     WSP  D +      G
Sbjct: 219 WNKDGTLLATAS--LGDRAILIWHADDGKIQPLKRLGPPSSLL-SWSPDNDHLI-ASTVG 274

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             F +         ER +    ++Q+  WSP GR L+F   KD
Sbjct: 275 HVFRMWECYDRWKTERWVCNSDSVQSTCWSPCGRFLLFVATKD 317


>gi|158302085|ref|XP_321720.2| AGAP001414-PA [Anopheles gambiae str. PEST]
 gi|157012782|gb|EAA01078.3| AGAP001414-PA [Anopheles gambiae str. PEST]
          Length = 509

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 61/179 (34%), Gaps = 22/179 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---------ISA 307
           +S +    FS +G+  + +   D  ++++  +  +    +       +         +S 
Sbjct: 214 KSHVECALFSPDGQYLV-TGSVDGFIEVW--NFTTGKIRKDLKYQAQDNFMMMEQAILSM 270

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++S DS  +     ++G+ +++ +   G   +R  +          +S     I    F 
Sbjct: 271 AFSRDSEMLA-TGSQDGQVKVWKL-LTGQCLRRFEKAHSKGVTCLHFSRDNSQILTASFD 328

Query: 368 GEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                I +      +         S +    +SP G  ++ +     D   K++S+   
Sbjct: 329 ---HLIRLYGLKSGKMLKEFRGHTSFVNEAAFSPDGHHVLSASS---DGTVKVWSLKTT 381



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 51/147 (34%), Gaps = 12/147 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  ++  A++D      + L   +  +  K      S +    FS +G   L S   
Sbjct: 315 FSRDNSQILTASFDH----LIRLYGLKSGKMLKEFRGHTSFVNEAAFSPDGHHVL-SASS 369

Query: 279 DEAMDIYSVDLQS--NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D  + ++S+      +  + L   L +N       +    V          + +M   G 
Sbjct: 370 DGTVKVWSLKTTECISTFKALGTHLAVNSVLILPKNPEHFVVC---NRSNTVVIMNMQGQ 426

Query: 337 DQKRISQDKE--ASYFDPVWSPQGDLI 361
             +  S  K    ++     SP+G+ I
Sbjct: 427 IVRSFSSGKREGGAFICATISPRGEFI 453


>gi|121703536|ref|XP_001270032.1| wd-repeat protein [Aspergillus clavatus NRRL 1]
 gi|119398176|gb|EAW08606.1| wd-repeat protein [Aspergillus clavatus NRRL 1]
          Length = 589

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 49/157 (31%), Gaps = 16/157 (10%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-------ISAS 308
             S++   RFS +GK                 D+ +           ++        S  
Sbjct: 282 HDSVVCCVRFSRDGKYLA----TGCNRSAQIFDVNTGQIVATLQDESVDKDGDLYIRSVC 337

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +   ++    +Q+ V        K I    E   +   ++  G  IA +    
Sbjct: 338 FSPDGKYLATGAE---DKQIRVWDIAARTIKHIFTGHEQDIYSLDFAGNGRYIA-SGSGD 393

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +   +  +  DG     L  +  + A   SP G  + 
Sbjct: 394 KTVRLWDI-LDGKLVYTLSIEDGVTAVAMSPDGHYVA 429


>gi|269839863|ref|YP_003324556.1| hypothetical protein Tter_2850 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269791593|gb|ACZ43733.1| hypothetical protein Tter_2850 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 363

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 72/234 (30%), Gaps = 29/234 (12%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-------S 275
              + Y + +D   +++Y + T+ +    R      +I  P+  S+G+  +         
Sbjct: 24  GPFILYPSNEDG-TVKLYDLRTQREYVIARREQKYDVISTPK--SDGRWVIYREELLNPH 80

Query: 276 VQKDEAMD---IYSVDLQSNATERLTNT--LFIN--ISASYSPDSSQIVFESDREG---- 324
              +       I+ VDL + +   L  +        +S  Y     + ++   +      
Sbjct: 81  QSGEGNPKKPRIFVVDLLTGSKRLLAASHVPGYPQIVSPLYDISQGKAIYRIVKGDPNAP 140

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA------FTKFSGEKFAIGVMKK 378
             +++++       + I       Y   V       +                 I     
Sbjct: 141 SSEIHIVDLASGKDQLIRSYTWPRYAHGVAIDDNRAVWSLIMAPHANHKNTSGEIYYYDL 200

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              + RLL        P  S  GR +I+ R        ++  +DL    + +I+
Sbjct: 201 RTGRGRLLTITGYEWMPDIS--GRYVIWIRSSGFLYYGRVVIMDLYTGKKQVID 252


>gi|260842882|ref|YP_003220660.1| rhomboid family protein [Escherichia coli O103:H2 str. 12009]
 gi|257758029|dbj|BAI29526.1| rhomboid family protein [Escherichia coli O103:H2 str. 12009]
          Length = 625

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T            S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSLI--LSRDGTKAWVMNRTSNSVSAIDLVAYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+    +   +I  ++  ++  E            +  +
Sbjct: 440 TGTSGKPGAWVMALSPDERTLLV--PGEGRGNIVRINTITHQKEDFPAGDARGTISAMRF 497

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ +     S   +      + Y     SP G  +A   +  +
Sbjct: 498 RPENGEVIFA-DSQGISRISIGDQQTSIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 554

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 555 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 603

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 604 SLDPQAIIRHPQYG 617


>gi|255015742|ref|ZP_05287868.1| putative alanyl dipeptidyl peptidase [Bacteroides sp. 2_1_7]
          Length = 827

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/339 (13%), Positives = 100/339 (29%), Gaps = 72/339 (21%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF----------------SSPASWR 152
             +VT  V  E        + L DV D K+I                         +S+ 
Sbjct: 168 DAVVTATVNPEK------RYTLSDVFDGKRIQSASLSPNGKFIIVSYQETYPGGKQSSFT 221

Query: 153 KIAHTIS-DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           +I    +   + ++    +    S + + +   + G    +L     D  + +    S  
Sbjct: 222 QILDKATGSVLVENGQSLRWMPKSNLAYYTRKGMKGTELVTL-----DPTSKKENILSSQ 276

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------------------- 251
                  F P +  + ++  +     R  + +  +    +                    
Sbjct: 277 LPEGSFSFGPTEDYLLFSIREKGPQERKEIQEILVPDDRQPGWRNRMFIHKYDLRTGLFQ 336

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLTNTLFIN 304
           R+    +       S +G   L S ++            IY +DL++   + L       
Sbjct: 337 RLTYGHTSTYINDVSQDGHYLLFSRREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFV 396

Query: 305 ISASYSPDSSQI-------VF----------ESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             A +SPD++Q+        F          ++      QL++        K +++D + 
Sbjct: 397 SRAVFSPDATQLLVDASGEAFDGIGLKIKEGQTSNTSDGQLFLYNIADKSIKPLTKDFDP 456

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           S     W+     I  T    ++  +  +     + + L
Sbjct: 457 SVDSYEWNALDKQIYITAKDKDRVRMYSLNPSNGKIKQL 495



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 86/276 (31%), Gaps = 53/276 (19%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I+YL+ S  +   +  F+P  +K A  T       R  L D    +  +          +
Sbjct: 147 IKYLSESHKENALKASFNP--EKDAVVTATVNPEKRYTLSDVFDGKRIQ----------S 194

Query: 263 PRFSSNGKRALISVQKD-----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              S NGK  ++S Q+      ++     +D  + +   + N   +     + P S+   
Sbjct: 195 ASLSPNGKFIIVSYQETYPGGKQSSFTQILDKATGSV-LVENGQSL----RWMPKSNLAY 249

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-------- 369
           +        +L  +      +  +S       F   + P  D + F+             
Sbjct: 250 YTRKGMKGTELVTLDPTSKKENILSSQLPEGSF--SFGPTEDYLLFSIREKGPQERKEIQ 307

Query: 370 --------------KFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG-- 412
                         +  I          + L    ++      S  G  L+FSR++    
Sbjct: 308 EILVPDDRQPGWRNRMFIHKYDLRTGLFQRLTYGHTSTYINDVSQDGHYLLFSRREPNLT 367

Query: 413 ---DTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
               + + +Y +DL     +TLI    + S   +  
Sbjct: 368 ERPFSRTYIYKMDLRTMHVDTLIKGEKFVSRAVFSP 403


>gi|256393401|ref|YP_003114965.1| hypothetical protein Caci_4260 [Catenulispora acidiphila DSM 44928]
 gi|256359627|gb|ACU73124.1| conserved hypothetical protein [Catenulispora acidiphila DSM 44928]
          Length = 346

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 65/203 (32%), Gaps = 31/203 (15%)

Query: 264 RFSSNGKRALISVQKDE--------AMDIYSVDLQSNATER------LT------NTLFI 303
           R S++G+ A  +             +     +DL++ A         +T      + +  
Sbjct: 146 RLSADGRMAAWTTFVAGDAYVGPAFSTRTSILDLKTGALTASLESFAVTLQGKPYHAVDE 205

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N+      D +         G+  L            ++ + E     P  SP G  + F
Sbjct: 206 NVWGVTFADDNTFYATLGTAGRTWLVRGDVAAHTLTTLTDNVE----CPSLSPDGTRVVF 261

Query: 364 TKFSGEK----FAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            K         + + V+      E  L E  +      W      ++++  + G +G  +
Sbjct: 262 KKRVSSDAWKMWHLEVLNLATMTETPLAEQRSVDDQAAWLDDHT-VMYAVPQSGSSGYDV 320

Query: 419 YSIDLNGRNETLINTPAYASDPQ 441
           +S   +G  + ++  P  A  P 
Sbjct: 321 WSTPADGSGKPVLVAP-NAFSPS 342



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 38/107 (35%), Gaps = 7/107 (6%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEAMDIYSVDLQSNATER 296
               R D A   +      +  P  S +G R +     S    +   +  ++L +     
Sbjct: 228 TWLVRGDVAAHTLTTLTDNVECPSLSPDGTRVVFKKRVSSDAWKMWHLEVLNLATMTETP 287

Query: 297 LTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRI 341
           L     ++  A++  D + +     S   G + ++   ++GS +  +
Sbjct: 288 LAEQRSVDDQAAWLDDHTVMYAVPQSGSSGYD-VWSTPADGSGKPVL 333



 Score = 37.3 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 61/199 (30%), Gaps = 31/199 (15%)

Query: 272 ALISVQKDEA----MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--- 324
            L+ ++ DE       +   D      +++     I   A  S D     + +   G   
Sbjct: 107 ILLCLRADENLVRVASVEVYDTSLKLIKKV-QAAGIPNRARLSADGRMAAWTTFVAGDAY 165

Query: 325 -----KEQLYVMQSNGSDQKR------ISQDK------EASYFDPVWSPQGDLIAFTKFS 367
                  +  ++               ++         + + +   ++      A    +
Sbjct: 166 VGPAFSTRTSILDLKTGALTASLESFAVTLQGKPYHAVDENVWGVTFADDNTFYATLGTA 225

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT--GSKLYSIDLNG 425
           G      +++ D +   L     N++ P+ SP G  ++F ++   D      L  ++L  
Sbjct: 226 GRT---WLVRGDVAAHTLTTLTDNVECPSLSPDGTRVVFKKRVSSDAWKMWHLEVLNLAT 282

Query: 426 RNETLINTPAYASD-PQWV 443
             ET +       D   W+
Sbjct: 283 MTETPLAEQRSVDDQAAWL 301


>gi|218553198|ref|YP_002386111.1| hypothetical protein ECIAI1_0640 [Escherichia coli IAI1]
 gi|218359966|emb|CAQ97510.1| conserved hypothetical protein; putative membrane protein
           [Escherichia coli IAI1]
          Length = 625

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T            S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSLI--LSRDGTKAWVMNRTSNSVSAIDLVAYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+    +   +I  ++  ++  E            +  +
Sbjct: 440 TGTSGKPGAWVMALSPDERTLLV--PGEGRGNIVRINTITHQKEDFPAGDARGTISAMRF 497

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ +     S   +      + Y     SP G  +A   +  +
Sbjct: 498 RPENGEVIFA-DSQGISRISIGDQQTSIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 554

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 555 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 603

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 604 SLDPQAIIRHPQYG 617


>gi|159026101|emb|CAO86330.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 337

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 54/165 (32%), Gaps = 12/165 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +  +    ++    SP+  ++   ++D      V   D +  + P R       + A +
Sbjct: 52  TILKADQDPIYALAISPDNSRLLSGSFDG----TVREWDLKT-QKPLRTWQLGDTVNAIQ 106

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           FS +GK   ++      +  +  + ++   E       F+   A+ SPD   +   S   
Sbjct: 107 FSPDGKS-FVTADAGGKVQRW--NTRTRKLEMTYPGHAFLVTDAAISPDGKILATGS--- 160

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
               + +         +  +          +SP G  I    + G
Sbjct: 161 WDRTVKLWDFQTGTLLKTLRGHNHPIQAIAFSPDGKGIVSADYDG 205



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 61/183 (33%), Gaps = 11/183 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ + D     +       +  +    FSP+ + +  A YD      V L    
Sbjct: 158 TGSWDRTVKLWDFQTGTLLKTLRGHNHPIQAIAFSPDGKGIVSADYDG----FVKLWKVS 213

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R  +        +    FS +G  A  +  +D ++  + V      T  L +   +  
Sbjct: 214 TGRFIRAYAGNLFPVYRVLFSKDGNTAG-TASQDGSIRSWQVKSGIGTTTILAHNDAVTD 272

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A    D  +++  +  +G  + + + +    ++ ++  K       V S  G  +    
Sbjct: 273 MALL--DGGKVLASTSGDGTVKFWDVNT----RRHLNTLKGNVILRMVASQDGRWLVTGD 326

Query: 366 FSG 368
             G
Sbjct: 327 RDG 329



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 21/211 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             P    ++ +   SP+ + +A  ++D      V L D +     K +      I A  F
Sbjct: 136 TYPGHAFLVTDAAISPDGKILATGSWDR----TVKLWDFQTGTLLKTLRGHNHPIQAIAF 191

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQIVFESD 321
           S +GK  + S   D  + ++ V        R       N+       +S D +     + 
Sbjct: 192 SPDGKGIV-SADYDGFVKLWKVSTG-----RFIRAYAGNLFPVYRVLFSKDGNT-AGTAS 244

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           ++G  + + ++S       ++ +   +    +    G  +  +              +  
Sbjct: 245 QDGSIRSWQVKSGIGTTTILAHNDAVTDMALL---DGGKVLASTSGDGTVKFW--DVNTR 299

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           +    ++ + +     S  GR L+ +  +DG
Sbjct: 300 RHLNTLKGNVILRMVASQDGRWLV-TGDRDG 329


>gi|126347743|emb|CAJ89460.1| putative WD40 repeat protein [Streptomyces ambofaciens ATCC 23877]
          Length = 357

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 48/279 (17%), Positives = 93/279 (33%), Gaps = 56/279 (20%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DGA I          +   RF+ + Q +A         + V ++D       +R+    
Sbjct: 83  ADGAAIWQGPLDPGNSVNAVRFAGDGQIIATTD------VLVAVLDPATGAITRRVTVDP 136

Query: 258 SMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQ------SNATERLTNTLFINISASYS 310
            +I     S +G R  ++V  +      ++ D +           +LT    ++  A +S
Sbjct: 137 PLIADVDVSGDGTRVALAVDHRHGGNHQFTGDARVVELATGEVLGKLTPDDAVHAVA-FS 195

Query: 311 PDSSQIV----------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           PD+  ++          FES   G+    V        ++I+           + P+G  
Sbjct: 196 PDADTVLCCAADDTTRMFESVGGGQ----VWPLPEETDEQITAP-----NCLAYDPKGRW 246

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----------TWSPSGRSLIFSRKK 410
                  G      V+      E+         AP           +SP+G+    +   
Sbjct: 247 TVVGGADGFA---RVLDAATGVEKCRAPKLQPGAPDPGLGAVTHVAFSPNGKLAASASID 303

Query: 411 D-----GDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +     G TG +LY+   +      + T  ++ D +W+G
Sbjct: 304 NVVRLFGLTGQELYAAPTD-----EVLTLEFSPDGRWLG 337


>gi|300775234|ref|ZP_07085096.1| dipeptidyl aminopeptidase IV [Chryseobacterium gleum ATCC 35910]
 gi|300505974|gb|EFK37110.1| dipeptidyl aminopeptidase IV [Chryseobacterium gleum ATCC 35910]
          Length = 726

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 65/180 (36%), Gaps = 11/180 (6%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQKDEA-MDIYSVDLQSNAT 294
           L V+ + T+     K  G     + A  +S + K   +  + + +  M +   D  +   
Sbjct: 255 LGVFNIKTQSTTFLKIEGEKDQYLTAVTWSPDSKYIFVGVLNRGQNHMKMNQYDAVTGEL 314

Query: 295 ERL----TNTLFINISA--SYSPDSSQ-IVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            +     T++ ++      ++ P+S+   +++S R G   L+          +I++    
Sbjct: 315 VKTLFEETDSKYVEPQHPLTFFPNSNTDFIWQSQRTGYNHLFHYSLEKGLVAQITKGDWL 374

Query: 348 SYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                 ++ +   I FT    +  +  +  +     + + L     + A T S  G  L 
Sbjct: 375 VTDILGFNEKKKEIYFTSTKETPLERHLYRINWTNFKMQRLDSAEGMHAGTLSSDGNYLY 434


>gi|154297425|ref|XP_001549139.1| hypothetical protein BC1G_12309 [Botryotinia fuckeliana B05.10]
 gi|150858505|gb|EDN33697.1| hypothetical protein BC1G_12309 [Botryotinia fuckeliana B05.10]
          Length = 598

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           RFS + + VA        I  V   +      D +   +G+    I +  FS +G+    
Sbjct: 302 RFSHDGKFVATGCNRSAQIYDVVSGNKVCVLQDDSVDSVGDL--YIRSVCFSPDGRYLA- 358

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +  +D+ + ++  D+ S       +    +  S  ++ D   I   S   G   + +   
Sbjct: 359 TGAEDKLIRVW--DIASRTIRNTFSGHEQDIYSLDFARDGRTIASGS---GDRTVRLWDI 413

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSN 391
             S    ++   E        SP    +A          + V         ERL   D +
Sbjct: 414 EASQNI-LTLSIEDGVTTVAISPDTKYVAAGSLDKS---VRVWDAATGYLVERLEGPDGH 469

Query: 392 ---LQAPTWSPSGRSLI 405
              + +  ++P+G+ L+
Sbjct: 470 KDSVYSVAFAPNGKDLV 486


>gi|291237965|ref|XP_002738900.1| PREDICTED: WD repeat domain 82-like [Saccoglossus kowalevskii]
          Length = 314

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 80/195 (41%), Gaps = 16/195 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +SG +  ++   D    N + +      +   P  S + + + +A   + +++++
Sbjct: 119 VDDTFLSGSLDKTIRYWDLRSPNCQGVMH----LQGRPVASFDPEGLIFAAGINSEMIKL 174

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           Y +   D       +   +        +FS++GK  LIS        I  +D  +   ++
Sbjct: 175 YDLRSFDKGPFTTFRLQPDRDCDWTGLKFSADGKMILISTN---GAVIRLIDAFTGTPQQ 231

Query: 297 ----LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                TNT  + + AS+SPD SQ V    ++ K  ++  + NGS    +           
Sbjct: 232 TFMGHTNTKGLVLEASFSPD-SQFVLAGSQDSKVHVWNAE-NGSKTSVLESKHGGPVQCV 289

Query: 353 VWSPQGDLIAFTKFS 367
            ++P+  ++A T   
Sbjct: 290 QFNPKYMMLATTSND 304


>gi|282858978|ref|ZP_06268116.1| dipeptidyl peptidase IV N-terminal domain protein [Prevotella bivia
           JCVIHMP010]
 gi|282588258|gb|EFB93425.1| dipeptidyl peptidase IV N-terminal domain protein [Prevotella bivia
           JCVIHMP010]
          Length = 724

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 51/148 (34%), Gaps = 24/148 (16%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A  S D+ +I+  S + G++   +     +  +++ +           S  G  +     
Sbjct: 45  AQISEDNKKIIKYSFKTGQQTGVIFDLAETKGEQLEEFDGY-----EISEDGSKLLIETN 99

Query: 367 SGEKFA------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           S   +         +          L  +   Q PT+SP+ + + F R       + ++ 
Sbjct: 100 SKPIYRRSYTADFYLYDVKNKTLSKLSNNGAQQIPTFSPNSKYVAFVRS------NNIFI 153

Query: 421 IDLNGRNETLINTPAYASD-----PQWV 443
            D  G+NE  + T    +      P WV
Sbjct: 154 TD--GKNEKQVTTDGEFNKIINGLPDWV 179



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 90/284 (31%), Gaps = 41/284 (14%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD- 233
           S++L  + S        +      D  N      S +     P FSPN + VA+   ++ 
Sbjct: 92  SKLLIETNSKPIYRRSYTADFYLYDVKNKTLSKLSNNGAQQIPTFSPNSKYVAFVRSNNI 151

Query: 234 ----EDILRVYLMDTRIDRAPKRIGNF-----RSMILAPRFSSNGKRALISVQKDEAMDI 284
                   +    D   ++    + ++          A  +S++ K        +  +  
Sbjct: 152 FITDGKNEKQVTTDGEFNKIINGLPDWVNEEEFGFNNALAWSADSKTLSWIRYDESKVKT 211

Query: 285 YSVDLQSNATERLTNTLFINISASY-----SPDSSQIVFESDR--EGKEQLYVMQ-SNGS 336
           YS+ L   A   LTN        SY       D+S +   S     GK   Y +  +   
Sbjct: 212 YSLQLFQGARPMLTNYRTYPGLYSYKYPKAGEDNSVVTAWSYSLDNGKTLKYELPLAADG 271

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDS----- 390
              RI    +A+           +I +T     ++  +        +  +L+++S     
Sbjct: 272 YIPRIKTTSDAA----------RIIIYTMNRHQDQLNLYAANPTTGKCSILIKESVPKYV 321

Query: 391 ---NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
               ++      +   ++    +DG     LY    +G+    I
Sbjct: 322 KEEAMEGIRIMKN--YILVPSDRDGYM--HLYLYSKDGKLIRQI 361


>gi|295688463|ref|YP_003592156.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Caulobacter segnis ATCC 21756]
 gi|295430366|gb|ADG09538.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Caulobacter segnis ATCC 21756]
          Length = 827

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/161 (13%), Positives = 48/161 (29%), Gaps = 14/161 (8%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +AP +S +G +    +     ++++  D+++    ++T        A  +P     V++ 
Sbjct: 127 IAPSWSPDGSKLAFVLDAKSGLELWVADVKAATARKVTEARVNAALAVATPGGVTGVYDW 186

Query: 321 DREGKEQLYVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDL---IAFTKFSGEKFAIG 374
             +G   L  M            ++ +          +        +         F   
Sbjct: 187 LPDGSGLLAPMTVADRGAPPAADVTPNGPTIQESKGRTAAIRTYQDLLSNAHDEALFDYY 246

Query: 375 -------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                  V   DG    +            SP G+ L+ +R
Sbjct: 247 FTSQLTRVSLADGGTAPV-GRPGIFSGVAISPDGQYLLTTR 286



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 47/159 (29%), Gaps = 34/159 (21%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVD-----LQSNATERLTNTLFINISASYSPDSSQIVF 318
             S + ++ L  + ++    I +V      L        TN   I   A++    + + F
Sbjct: 53  AVSPD-RKVLAQLGRENLPSIAAVSEPILRLGGYRINPRTNGP-IEARANWL---NSLAF 107

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           E                   + +S    A +  P WSP G  +AF   +     + V   
Sbjct: 108 E------------DVATGKVRPVSLPAGARFIAPSWSPDGSKLAFVLDAKSGLELWVADV 155

Query: 379 DGSQERLLVE------------DSNLQAPTWSPSGRSLI 405
             +  R + E                    W P G  L+
Sbjct: 156 KAATARKVTEARVNAALAVATPGGVTGVYDWLPDGSGLL 194



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 67/242 (27%), Gaps = 39/242 (16%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
                NSL   D     +R ++         P +SP+  K+A+   D +  L +++ D +
Sbjct: 98  RANWLNSLAFEDVATGKVRPVSLPAGARFIAPSWSPDGSKLAFV-LDAKSGLELWVADVK 156

Query: 246 IDRAPKR----------IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
              A K           +     +     +  +G   L  +   +     + D+  N   
Sbjct: 157 AATARKVTEARVNAALAVATPGGVTGVYDWLPDGSGLLAPMTVADRGAPPAADVTPNGPT 216

Query: 296 ------RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                 R           S + D +     F S      QL  +         +   +  
Sbjct: 217 IQESKGRTAAIRTYQDLLSNAHDEALFDYYFTS------QLTRVSLADGGTAPV--GRPG 268

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKF----------AIGVMKKDGSQERLLVEDSNLQA--P 395
            +     SP G  +  T+                 I V   DG   + L +        P
Sbjct: 269 IFSGVAISPDGQYLLTTRLKRPYSYLVPASLFATEIAVSTIDGRPVKTLADRPLADTLPP 328

Query: 396 TW 397
            +
Sbjct: 329 AF 330



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 4/63 (6%)

Query: 372 AIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           ++        + R   L   +   AP+WSP G  L F    D  +G +L+  D+      
Sbjct: 104 SLAFEDVATGKVRPVSLPAGARFIAPSWSPDGSKLAFVL--DAKSGLELWVADVKAATAR 161

Query: 430 LIN 432
            + 
Sbjct: 162 KVT 164


>gi|224118992|ref|XP_002317959.1| predicted protein [Populus trichocarpa]
 gi|222858632|gb|EEE96179.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 54/162 (33%), Gaps = 21/162 (12%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
               +   +    I ++D   +    L          ++ P +  +    D  G    + 
Sbjct: 1   MVAAAGDDEGIKLINTID--GSIARVLKGHKGPVTGLAFDPINEYLA-TVDSVGTVLFWE 57

Query: 331 MQSNG------SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +QS G           I  D         WSP G+ +A     G +  + +  +D + E+
Sbjct: 58  LQSGGILHTLKGVAPNIISDTS-FMNVVSWSPDGETLAV---PGLRNDVVMYDRDTA-EK 112

Query: 385 LLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSID 422
           L     +   P    +WSP+G+   +      D    ++ +D
Sbjct: 113 LFSLRGDHVQPVCYLSWSPNGK---YMATSGLDRQILIWDVD 151



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 64/179 (35%), Gaps = 19/179 (10%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIG 254
           DG+  R L   +  +     F P  + +A      T    ++    ++ T    AP  I 
Sbjct: 18  DGSIARVLKGHKGPVTGL-AFDPINEYLATVDSVGTVLFWELQSGGILHTLKGVAPNIIS 76

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYS 310
           +   M +   +S +G+   +   ++   D+   D  +   E+L +    ++      S+S
Sbjct: 77  DTSFMNV-VSWSPDGETLAVPGLRN---DVVMYDRDT--AEKLFSLRGDHVQPVCYLSWS 130

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           P+   +   S  +   Q+ +   +        Q  E       W P G+ +A     G+
Sbjct: 131 PNGKYMA-TSGLD--RQILIWDVDKKQDID-RQKFEDRISGMAWKPIGNALAVIDVMGK 185



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 39/129 (30%), Gaps = 16/129 (12%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK------KD 379
           E + ++ +      R+ +  +       + P  + +A     G      +          
Sbjct: 9   EGIKLINTIDGSIARVLKGHKGPVTGLAFDPINEYLATVDSVGTVLFWELQSGGILHTLK 68

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           G    ++ + S +   +WSP G +L     ++      +   D +   E L +       
Sbjct: 69  GVAPNIISDTSFMNVVSWSPDGETLAVPGLRN-----DVVMYDRDTA-EKLFSLRGDHVQ 122

Query: 440 P----QWVG 444
           P     W  
Sbjct: 123 PVCYLSWSP 131


>gi|198425920|ref|XP_002122530.1| PREDICTED: similar to WD repeat domain 61 [Ciona intestinalis]
          Length = 305

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/209 (12%), Positives = 63/209 (30%), Gaps = 19/209 (9%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERL 297
           + L D    +  + I           FS +G          ++  I  +++       +L
Sbjct: 88  IRLWDLDSGKQLRAIDGGTVETWTVAFSPDGNHIA---TGGQSGQILVINVDDGRTEFKL 144

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWS 355
                  +S +YS +   +       G     +   + + Q+ +   +  +       +S
Sbjct: 145 DTRGKFTLSIAYSDNGKYVAC-----GAMDGIIKVFDVASQRLLHTLEGHAMPIRSLAFS 199

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P    +  T     +  +  +K     + L    S +    +  +   L F+     D  
Sbjct: 200 PDSHRLV-TASDDGQIKVYDVKNATFIQTLSGHSSWVHGVAFCHNN--LHFAS-CSADKT 255

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVG 444
            K++ +  +      +NT     D  W  
Sbjct: 256 VKIWDVSSH----QCVNTFYDHRDQVWSC 280



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 1/79 (1%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + +   +   Q R         +   +SP G+ IA    SG+   I V     ++ +L 
Sbjct: 87  HIRLWDLDSGKQLRAIDGGTVETWTVAFSPDGNHIATGGQSGQILVINV-DDGRTEFKLD 145

Query: 387 VEDSNLQAPTWSPSGRSLI 405
                  +  +S +G+ + 
Sbjct: 146 TRGKFTLSIAYSDNGKYVA 164



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/258 (12%), Positives = 71/258 (27%), Gaps = 33/258 (12%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                  L    RLWD+   KQ+             +     + + +       G     
Sbjct: 77  TIAASSSLDAHIRLWDLDSGKQL-------------RAIDGGTVETWTVAFSPDG----- 118

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                  + +G     + V++ D     +   +R +      +S N + VA    D    
Sbjct: 119 -----NHIATGGQSGQILVINVDDGRTEFKLDTRGKFTLSIAYSDNGKYVACGAMDG--- 170

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + + D    R    +      I +  FS +  R + +   D  + +Y V   +     
Sbjct: 171 -IIKVFDVASQRLLHTLEGHAMPIRSLAFSPDSHRLV-TASDDGQIKVYDVKNATFIQT- 227

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L+         ++  ++      S     + + +   +         D     +   ++ 
Sbjct: 228 LSGHSSWVHGVAFCHNNLHFASCS---ADKTVKIWDVSSHQCVNTFYDHRDQVWSCCYNN 284

Query: 357 QGDLIAFTKFSGEKFAIG 374
            G  +       +   I 
Sbjct: 285 NGSKLVSVS-DDKAIHIY 301


>gi|190896150|gb|ACE96588.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896152|gb|ACE96589.1| U5 snRNP-specific protein-like factor [Populus tremula]
          Length = 215

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 71/227 (31%), Gaps = 23/227 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +       + +  ++ +  ++  A+ D      V   D    +  K++    S + + 
Sbjct: 4   FMVMRGHKNAVLDLHWTADGSQIISASPDK----TVRAWDVETGKQIKKMAEHSSFVNSC 59

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S  G   ++S   D    ++  DL+     +     +   + S+S D+S  +F    +
Sbjct: 60  CPSRRGPPLVVSGSDDGTSKLW--DLRHKGAIQTFPDKYQITAVSFS-DASDKIFTGGID 116

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + V      +     +  +        SP G  +  T     K  I  M+    Q 
Sbjct: 117 --NDVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLL-TNGMDNKLCIWDMRPYAPQN 173

Query: 384 R--LLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           R   + E             +WSP G  +       G     +Y  D
Sbjct: 174 RCVKIFEGHQHNFEKNLLKCSWSPDGSKV-----TAGSADRMVYIWD 215


>gi|296225217|ref|XP_002758397.1| PREDICTED: acylamino-acid-releasing enzyme [Callithrix jacchus]
          Length = 732

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 74/222 (33%), Gaps = 31/222 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEP 217
           D+I +    ++     + +F  +   + + K+   LCV+D +  NI  L    D +    
Sbjct: 189 DEIARLKKPDQAIKGDQFVFYEDWGENMVSKSIPVLCVLDVESGNISVLEGVPDNVSPGQ 248

Query: 218 R-FSPNQQKVAYATYDDEDIL----------RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             ++P    V +  +  E                     I    + + +    + +PR S
Sbjct: 249 AFWAPGDAGVVFVGWWHEPFRLGIRFCTNRRSALYYVDLIGGKCELLSDVSLAVSSPRLS 308

Query: 267 SNGKRALI----SVQKDEA-MDIYSVDLQSNA--------TERLT-NTLFINIS----AS 308
            +  R +     S+        +   D  +            +L  N   I  S      
Sbjct: 309 PDQCRIVYLQYPSLIPHHQCSQLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGC 368

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +S DS ++VF+S +  ++ L+ + +       ++       +
Sbjct: 369 WSADSQRVVFDSAQRSRQDLFAVDTQVGTVTSLTAGGAGGSW 410


>gi|224100469|ref|XP_002311889.1| predicted protein [Populus trichocarpa]
 gi|222851709|gb|EEE89256.1| predicted protein [Populus trichocarpa]
          Length = 516

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 9/116 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESD 321
           FS +GK    S  KD++  I+ V +          L       ++ S+SPD +Q++   +
Sbjct: 236 FSHDGKYLA-SSSKDQSAIIWQV-MDGGKASWKHTLIGHQKPVLTVSWSPDDNQLLTCGE 293

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
               E +    +N      + +     +    WSP G +I     + + F++  + 
Sbjct: 294 ---DEVIRRWDANLGQCLHVYEKIGVGFISCAWSPDGRVIL-AGMTNKSFSLWDVN 345



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 7/100 (7%)

Query: 309 YSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +S D   +   S ++    ++ VM    +  K      +       WSP  + +      
Sbjct: 236 FSHDGKYLA-SSSKDQSAIIWQVMDGGKASWKHTLIGHQKPVLTVSWSPDDNQLLTC--- 291

Query: 368 GEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLI 405
           GE   I     +  Q   + E       +  WSP GR ++
Sbjct: 292 GEDEVIRRWDANLGQCLHVYEKIGVGFISCAWSPDGRVIL 331


>gi|255931853|ref|XP_002557483.1| Pc12g06410 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582102|emb|CAP80268.1| Pc12g06410 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1504

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 45/127 (35%), Gaps = 14/127 (11%)

Query: 195  VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
            ++D D +            +     SP+   +A  ++D      + + +         + 
Sbjct: 906  LVDPDWSQCIQTLYGHFAHVTSVACSPSGTLIASGSWDH----TIRIWEEESGHVLNILE 961

Query: 255  NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYS 310
              + ++ +  FS +G+R   S  ++  + I+  D+++    R   T  I+        +S
Sbjct: 962  GHKDVVSSVGFSPDGRRIA-SASRNGTIIIW--DVKTGECLR---TFSISKDPKSRVVFS 1015

Query: 311  PDSSQIV 317
            P      
Sbjct: 1016 PTGQIAA 1022



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/239 (11%), Positives = 78/239 (32%), Gaps = 26/239 (10%)

Query: 186  SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            SG   +++ + + +  ++  +      ++    FSP+ +++A A+ +      + + D +
Sbjct: 939  SGSWDHTIRIWEEESGHVLNILEGHKDVVSSVGFSPDGRRIASASRNG----TIIIWDVK 994

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
                 +     +       FS  G+ A     +   + I+  D  +      +T+     
Sbjct: 995  TGECLRTFSISKDPKSRVVFSPTGQIAA--KSEPGTLKIW--DPHTGECLNSITSFDG-- 1048

Query: 305  ISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S  ++       V+ S+R    Q+           +I    +++      S    +++ 
Sbjct: 1049 RSPVAFISSQHLAVYSSER----QIESWDVVKGTCLQILGHADSAD-KISVSTDRQMVSG 1103

Query: 364  TKFSG-------EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +  +            + +       +R            + P+G  +  S  +DG   
Sbjct: 1104 SHGNNLEVWGQEGDCRLTLGDPHNQTDRQFKRRRGYSTVAFLPNGNII--SGSEDGSVN 1160


>gi|160941285|ref|ZP_02088622.1| hypothetical protein CLOBOL_06178 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435846|gb|EDP13613.1| hypothetical protein CLOBOL_06178 [Clostridium bolteae ATCC
           BAA-613]
          Length = 473

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 52/314 (16%), Positives = 112/314 (35%), Gaps = 81/314 (25%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFS--PNQQKVAYATYDDEDILRVYLMDTRIDR-APKR 252
           + +DG     +   ++++L     S  P+ ++  YA+  +  I+RV++   + +   P+ 
Sbjct: 95  LRQDGFYGCSIETGKEELLLNGALSFVPDGKEGFYASSRETGIVRVHMGREQEEVWKPEP 154

Query: 253 IGNFRSMILAPRFSSNGKRALISVQK---------------DEAMDIYSVDLQSNATERL 297
           +            S +GK+   + ++               ++ + +  ++L+    ++L
Sbjct: 155 VEGGWIQCEKLTLSPDGKKLAFARRRYVDRRKDPGLSLFEQNQGIWMIQMNLE--KEKKL 212

Query: 298 -------------------TNTLFIN--ISASYSPDSSQIVFE-----SDREGKEQLYVM 331
                              T+         A +SPDSS++ F      S     + +   
Sbjct: 213 SVLIQIIGEEPPFFERMEETDGEPYPYLWPAKWSPDSSRL-FIWQDVLSGSMRSDGIGTA 271

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--------- 382
             +      I    E    + V  P  + + F    GE  ++ ++   G +         
Sbjct: 272 VYDTVSGTMIDPLGEQ---EEVVLPYNENVVF----GEDNSLFLLAGAGREMALDKELVK 324

Query: 383 ---------ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG--------SKLYSIDLNG 425
                    E+L       Q+P  S  G+S+ F+  K+ +TG         +LY ++ NG
Sbjct: 325 IPPEKGAVHEKLKTPGLVPQSPQVSYDGKSIFFAASKELETGEQVEYPIWRQLYRME-NG 383

Query: 426 RNETLINTPAYASD 439
               L N   Y+S+
Sbjct: 384 HVAELTNDSEYSSE 397



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 18/138 (13%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            +LR    D     + +R+   +  I +P FSS+G+ A   +++D         +++   
Sbjct: 56  RVLRNGAEDANAAVSTERLAEGK-DISSPLFSSDGRMAGY-LRQDGFYGC---SIETGKE 110

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDP 352
           E L N        S+ PD  +  + S RE    +  +   G +Q+ + + +  E  +   
Sbjct: 111 ELLLNGA-----LSFVPDGKEGFYASSRE--TGIVRVHM-GREQEEVWKPEPVEGGWIQC 162

Query: 353 ---VWSPQGDLIAFTKFS 367
                SP G  +AF +  
Sbjct: 163 EKLTLSPDGKKLAFARRR 180



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 71/207 (34%), Gaps = 27/207 (13%)

Query: 207 TPSRDQILFEPR-FSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           T         P  +SP+  ++             D +   + DT        +G    ++
Sbjct: 232 TDGEPYPYLWPAKWSPDSSRLFIWQDVLSGSMRSDGIGTAVYDTVSGTMIDPLGEQEEVV 291

Query: 261 L----APRFSSNGKRALISVQKDE---AMDIYSVDLQSNAT-ERLTNTLFINISASYSPD 312
           L       F  +    L++    E     ++  +  +  A  E+L     +  S   S D
Sbjct: 292 LPYNENVVFGEDNSLFLLAGAGREMALDKELVKIPPEKGAVHEKLKTPGLVPQSPQVSYD 351

Query: 313 SSQIVFESDRE---GKE-------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              I F + +E   G++       QLY M++       ++ D E S   PV +  G  + 
Sbjct: 352 GKSIFFAASKELETGEQVEYPIWRQLYRMEN--GHVAELTNDSEYSSEFPVLTGDGSALV 409

Query: 363 FTKFSG-EKFAIGVMKKDGSQERLLVE 388
           F +       +I  +  +GS  + L +
Sbjct: 410 FGRVDKEGGMSIWSVGTNGSGLQKLAD 436


>gi|55742525|ref|NP_001006781.1| WD repeat-containing protein 1 [Xenopus (Silurana) tropicalis]
 gi|82235990|sp|Q6DIF4|WDR1_XENTR RecName: Full=WD repeat-containing protein 1; AltName:
           Full=Actin-interacting protein 1; Short=AIP1
 gi|49523180|gb|AAH75588.1| WD repeat domain 1 [Xenopus (Silurana) tropicalis]
          Length = 607

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 42/282 (14%), Positives = 92/282 (32%), Gaps = 43/282 (15%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   V+++++ D + ++      +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVAKIITGDPKGNNFLYTNGKSVIIRNIENPAIADIYTE----HAHPVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           R    G          + R+WD   ++ ++  ++       + IA               
Sbjct: 65  RYAPSGFYIASGDTSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---------GANIRYL 206
                          G+ +  I  ++   +       L     D             ++ 
Sbjct: 125 EKFGSVFLWDTGSSVGEISGNIKVINSVDIKQTRPYRLVTGSDDNCCAFFEGPPFKFKFT 184

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
                + +   RFSP+  ++A A  D     +++L D +       +G  +     I A 
Sbjct: 185 MADHSRFVNCVRFSPDGSRLASAGADG----QIFLYDGKTGEKVGNLGGSKAHDGGIYAV 240

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            +S++  + L S   D+   I+ V   S  T   T  L   +
Sbjct: 241 SWSADSTQLL-SASGDKTAKIWDVAANSAVT---TFHLGTEV 278


>gi|288801699|ref|ZP_06407141.1| 6-phosphogluconolactonase [Prevotella melaninogenica D18]
 gi|288335741|gb|EFC74174.1| 6-phosphogluconolactonase [Prevotella melaninogenica D18]
          Length = 365

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 59/192 (30%), Gaps = 21/192 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALIS 275
           F+P+   +    +  + IL               I         PR   FS NG+ A + 
Sbjct: 173 FAPDG-YILTTDFSGDRILCFSYNKRDKKLEDHDIAAHVKPGSGPRHLVFSPNGRYAYLM 231

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YSPDSSQIVFESDREGKEQLY 329
            +    + +YS        + L +    N +A        SPD    V+ S R   + + 
Sbjct: 232 NELSGKVIVYSY--SDGKLKELQSIAADNANARGGADIHVSPDG-MFVYASTRLKGDGIT 288

Query: 330 VMQSNGSDQ-----KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + +            +++     ++     +P G+ +           +    KD    +
Sbjct: 289 IFRVGNKGTLTRVGAQLTGKHPRNF---AITPNGNFLLVACRDDNSIQVYSRDKDTGLLK 345

Query: 385 LLVEDSNLQAPT 396
              +D  L  P 
Sbjct: 346 NTHQDIVLSHPV 357


>gi|271962368|ref|YP_003336564.1| serine/threonine protein kinase-like protein [Streptosporangium
            roseum DSM 43021]
 gi|270505543|gb|ACZ83821.1| Serine/threonine protein kinase-like protein [Streptosporangium
            roseum DSM 43021]
          Length = 1190

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 68/192 (35%), Gaps = 11/192 (5%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSP+ + +A       D   V L D    R+   +      ++A  FS +G+     V  
Sbjct: 916  FSPDGRTLA---IPRRDGSAVTLWDVTTRRSLTTLETGAGPVMALAFSGDGRTLAAGVGG 972

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL-----YVMQS 333
                +I   D+++      T       S ++ P    +       G E +      V   
Sbjct: 973  GGGKEIQIWDVRAGRITG-TVPRGAIQSLAFRPGGDPVGGRDGGSGGEVISVGAELVALP 1031

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             G      +           ++P G ++A    + ++  +  +++ G++  +L      Q
Sbjct: 1032 GGRTVSAPAGVSGPDVQSAAFTPDGRVLAL-GLADQRVLLWDVER-GARLGVLSVKGLQQ 1089

Query: 394  APTWSPSGRSLI 405
               +SP GR L+
Sbjct: 1090 PLRFSPDGRVLV 1101



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 57/321 (17%), Positives = 114/321 (35%), Gaps = 58/321 (18%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR       +  VE  +WD+   ++   +K    P S R               GE+G  
Sbjct: 708 GRWAAVAGRQGTVE--VWDLAAGRRAFSRK-IDGPVSLR---------------GERGA- 748

Query: 174 NSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
             +I F  +S   +     S+ ++D  G   R              FSP+ + +A     
Sbjct: 749 -PQIAFSPDSATLAVGGDTSIVLLDPAGGKQRGEHFPSTGGGSL-GFSPDGRFLA---EQ 803

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +D L ++ +  R   A   +  F       RF+++ +         +   + SVD+ + 
Sbjct: 804 ADDALYLWKVADRTISAQFPLATFGRA----RFTADSRTLRY---PTDYGSVVSVDISA- 855

Query: 293 ATERLTNTLFINI--------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
               +T+T  +N+        SA+++P    + + +   G  +L+       D  R++  
Sbjct: 856 ----VTHTDTLNVPKERSGWESAAFAPGGRVLAYAN--LGVARLW-------DPTRLAPI 902

Query: 345 KE----ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                  +    ++SP G  +A  +  G    +  +    S   L      + A  +S  
Sbjct: 903 GGPLTADAGSAGMFSPDGRTLAIPRRDGSAVTLWDVTTRRSLTTLETGAGPVMALAFSGD 962

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
           GR+L       G    +++ +
Sbjct: 963 GRTLAAGVGGGGGKEIQIWDV 983



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 56/184 (30%), Gaps = 35/184 (19%)

Query: 255 NFRSMILAPRFSSNGKRALIS-----VQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           +     + P     G RA +      +       +    L       L +        + 
Sbjct: 648 STTGKAVGPAI-PEGARAELEPERRLLSITGPDGLVMRPLDGGGP--LVSATGTEPEGTV 704

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKR-----ISQDKEASYFDPVWSPQGDLIAFT 364
           SPD       + R+G  +++ + +      R     +S   E       +SP    +A  
Sbjct: 705 SPDGRWAA-VAGRQGTVEVWDLAAGRRAFSRKIDGPVSLRGERGAPQIAFSPDSATLAV- 762

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-------WSPSGRSLIFSRKKDGDTGSK 417
              G   +I ++   G ++R          P+       +SP GR L     +  D    
Sbjct: 763 ---GGDTSIVLLDPAGGKQR------GEHFPSTGGGSLGFSPDGRFLA----EQADDALY 809

Query: 418 LYSI 421
           L+ +
Sbjct: 810 LWKV 813



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/164 (12%), Positives = 55/164 (33%), Gaps = 16/164 (9%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL----FINISA--SYSPDSSQIV 317
             S +G+ A ++ ++   ++++ +     A  R  +          +   ++SPDS+ + 
Sbjct: 703 TVSPDGRWAAVAGRQ-GTVEVWDLAAGRRAFSRKIDGPVSLRGERGAPQIAFSPDSATLA 761

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                 G   + ++   G  Q+              +SP G  +A  +     +   V  
Sbjct: 762 ----VGGDTSIVLLDPAGGKQRGEHFPSTGG-GSLGFSPDGRFLA-EQADDALYLWKVAD 815

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +  S +  L          ++   R+L +           + ++
Sbjct: 816 RTISAQFPLATFGRA---RFTADSRTLRYPTDYGSVVSVDISAV 856


>gi|239943056|ref|ZP_04694993.1| putative peptidase [Streptomyces roseosporus NRRL 15998]
 gi|239989514|ref|ZP_04710178.1| putative peptidase [Streptomyces roseosporus NRRL 11379]
          Length = 603

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 60/176 (34%), Gaps = 10/176 (5%)

Query: 260 ILAPRFS---SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +  P ++    +  R+L         ++Y+ D  S    ++T+          +PD   +
Sbjct: 20  VSLPDWAEDAPD--RSLFVSNATGTYELYAWDRASGRQRQVTDRPNGTTDGVLTPDGEAV 77

Query: 317 VFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFAI 373
            + SD +G E  +++ Q  G  +   +    A  +         G  +       +   +
Sbjct: 78  WWFSDTDGDEFGVWMRQPFGGGEDEPAAPGLAPSYPAGLAIGRDGSAVIGRSTDEDGTTV 137

Query: 374 GVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRN 427
            +++  G++   +     +      S  G  +     + GD   S L  +  +G  
Sbjct: 138 HLVRAPGAEPVEIYRHRESAGVGDLSHDGTLIALEHTEHGDAMHSALRVVRPDGST 193



 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 61/199 (30%), Gaps = 10/199 (5%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G    R         +     ++ ++   GA    +   R+        S +   +A 
Sbjct: 113 PAGLAIGRDGSAVIGRSTDEDGTTVHLVRAPGAEPVEIYRHRESAGVG-DLSHDGTLIAL 171

Query: 229 ATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNG-------KRALISVQKDE 280
              +  D +   L   R D +    + +          S  G        R L+  Q+  
Sbjct: 172 EHTEHGDAMHSALRVVRPDGSTVAELDDTEGGTKELGLSVLGFAPVAGDTRLLVGHQRRG 231

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             +    D  +     L   L  ++ A + PD S ++ E + E + +L+  +   +   R
Sbjct: 232 RWEPMIWDPVAGTETPLPIDLPGDVGAEWYPDGSALLVEHEFEARSELWRYEPGAAAPVR 291

Query: 341 ISQDKEASYFDPVWSPQGD 359
           + +    +       P G 
Sbjct: 292 V-ETPAGTVSGATARPDGT 309


>gi|154280737|ref|XP_001541181.1| hypothetical protein HCAG_03278 [Ajellomyces capsulatus NAm1]
 gi|150411360|gb|EDN06748.1| hypothetical protein HCAG_03278 [Ajellomyces capsulatus NAm1]
          Length = 528

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 57/139 (41%), Gaps = 9/139 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           ++E  VS     ++ + D   +N          + +    FSP+   +A A++D+     
Sbjct: 383 ITERFVSASDDFTMFLWDPATSNKPVARLLGHQKEVNHVTFSPDGAYIASASFDN----H 438

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
           V L + R  +    +      +    FS++  R L+S  KD  + ++  D+++      L
Sbjct: 439 VKLWNARDGKFISSLRGHVGAVYQCCFSAD-SRLLVSSSKDTTLKVW--DVRTGKLFMDL 495

Query: 298 TNTLFINISASYSPDSSQI 316
              L    +  +SPD  ++
Sbjct: 496 PGHLDEVYAVDWSPDGEKV 514



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 40/139 (28%), Gaps = 6/139 (4%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            K+        D   ++L D      P  R+   +  +    FS +G     S   D  +
Sbjct: 381 NKITERFVSASDDFTMFLWDPATSNKPVARLLGHQKEVNHVTFSPDGAYIA-SASFDNHV 439

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +++          L   +       +S DS  +V  S       L V            
Sbjct: 440 KLWNA-RDGKFISSLRGHVGAVYQCCFSADSRLLVSSSK---DTTLKVWDVRTGKLFMDL 495

Query: 343 QDKEASYFDPVWSPQGDLI 361
                  +   WSP G+ +
Sbjct: 496 PGHLDEVYAVDWSPDGEKV 514



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 39/132 (29%), Gaps = 4/132 (3%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +S   D  M ++     +    RL          ++SPD + I   S       + +  
Sbjct: 387 FVSASDDFTMFLWDPATSNKPVARLLGHQKEVNHVTFSPDGAYIASASF---DNHVKLWN 443

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +         +    + +   +S    L+  +        +  ++       L      +
Sbjct: 444 ARDGKFISSLRGHVGAVYQCCFSADSRLLV-SSSKDTTLKVWDVRTGKLFMDLPGHLDEV 502

Query: 393 QAPTWSPSGRSL 404
            A  WSP G  +
Sbjct: 503 YAVDWSPDGEKV 514


>gi|114326835|ref|YP_743992.1| vegetatible incompatibility protein HET-E-1 [Granulibacter
           bethesdensis CGDNIH1]
 gi|114315009|gb|ABI61069.1| vegetatible incompatibility protein HET-E-1 [Granulibacter
           bethesdensis CGDNIH1]
          Length = 352

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/266 (15%), Positives = 88/266 (33%), Gaps = 33/266 (12%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS----LCVMDRDGANIRYLTPSRDQIL 214
           SD   +++ G KG +   I  V      G+I  +    + V +  G  ++ L  +     
Sbjct: 96  SDGTVETVAGFKGKWVETIA-VHPDRKLGVIACTAGRAVHVFNAQGKLLKTLEHASTVTG 154

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               F    +++  + Y   + + ++ + ++ D    R+  ++              A++
Sbjct: 155 L--AFDAKGKRLFASHY---NGVSIWYVASKTDNP--RVLAWKGSHTGVAVHP-AAEAVV 206

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +  ++ ++  +   L      R++       S S+S     +       G E + +    
Sbjct: 207 TSMQENSLHGWR--LSDGHHMRMSGYPAKTRSLSFSRSGKWLA----SSGAEAIVLWPFF 260

Query: 335 GSDQKR-----ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           G          ++   +         P+ + +A     G    + VM  D    R+L   
Sbjct: 261 GGGPMGKQPMELAPIPDGLCTAVACHPRHEAVAAGYSDG----LAVM-ADIESGRILPIC 315

Query: 388 --EDSNLQAPTWSPSGRSLIFSRKKD 411
                 +    WSP GR L F     
Sbjct: 316 APGRGEITVLRWSPDGRHLAFGTTTG 341


>gi|21243265|ref|NP_642847.1| peptidase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108800|gb|AAM37383.1| peptidase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 781

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 9/106 (8%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
           D +QIV+ S+R+G E LY+      +  ++I++                 + FT      
Sbjct: 375 DGAQIVWASERDGWEHLYLYDGRSGEVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 434

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSR 408
                      +  DG     L   +      +SP GR L  ++SR
Sbjct: 435 GEDPYYRHAYRIGLDGRGLTALTPLAADHEVRYSPDGRWLLDLYSR 480



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 49/129 (37%), Gaps = 12/129 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA-SYSPDSSQIVFESD--RE 323
           +G + + + ++D    +Y  D +S     ++T   ++          + Q+ F +   + 
Sbjct: 375 DGAQIVWASERDGWEHLYLYDGRSGEVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 434

Query: 324 GKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMK 377
           G++      Y +  +G     ++    A+  +  +SP G  +   +++            
Sbjct: 435 GEDPYYRHAYRIGLDGRGLTALTPL--AADHEVRYSPDGRWLLDLYSRVDLGPVLELRRS 492

Query: 378 KDGSQERLL 386
            DGS  R +
Sbjct: 493 ADGSVARTV 501


>gi|89894174|ref|YP_517661.1| hypothetical protein DSY1428 [Desulfitobacterium hafniense Y51]
 gi|89333622|dbj|BAE83217.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 392

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 63/158 (39%), Gaps = 10/158 (6%)

Query: 209 SRDQILFEPRFSPNQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           + +Q +F+  +SP+Q++V Y        + +   YL         + + + +  + +  +
Sbjct: 66  NANQEIFQITWSPDQEQVLYIQPGGASKKGLDEAYLWQIG-KEEARFVRDVQPTVRSLSW 124

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S + K  +IS +  E      V+ ++       N   ++    + PDS+ I + ++    
Sbjct: 125 SPDSKHFIISEKLAEGAINSIVNAETLQESSF-NPKSMDT-PVWKPDSTAIAYGNEFHEY 182

Query: 326 EQLY----VMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            + +    +      D   + + K+  Y    W  +G+
Sbjct: 183 GETWGFLEIYTLGDQDSDYLWKAKDTYYRVESWDQEGN 220



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 308 SYSPDSSQIVFE----SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           ++SPD  Q+++     + ++G ++ Y+ Q  G ++ R  +D + +     WSP       
Sbjct: 75  TWSPDQEQVLYIQPGGASKKGLDEAYLWQI-GKEEARFVRDVQPTVRSLSWSPDSKHFII 133

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           ++   E     ++  +  QE       ++  P W P   ++ +
Sbjct: 134 SEKLAEGAINSIVNAETLQESS-FNPKSMDTPVWKPDSTAIAY 175


>gi|298208716|ref|YP_003716895.1| hypothetical protein CA2559_10758 [Croceibacter atlanticus
           HTCC2559]
 gi|83848641|gb|EAP86510.1| hypothetical protein CA2559_10758 [Croceibacter atlanticus
           HTCC2559]
          Length = 285

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 42/110 (38%), Gaps = 2/110 (1%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D+Y ++ ++     +++    +   S+  D S ++F   R+ +  + +   N    K 
Sbjct: 20  NTDVYFLNTETRNLVNISDNKGYDNQPSFISD-SLVLFAKSRQQQTDIILYNINSKASKW 78

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLVED 389
           IS   + S F PV  P    IA  +        +       ++  L+ + 
Sbjct: 79  ISHTTQGSEFSPVQIPNTKNIATVRLDTTGLQRLYSYNTTTNKTTLVNDS 128


>gi|302799996|ref|XP_002981756.1| hypothetical protein SELMODRAFT_115139 [Selaginella moellendorffii]
 gi|300150588|gb|EFJ17238.1| hypothetical protein SELMODRAFT_115139 [Selaginella moellendorffii]
          Length = 460

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 70/189 (37%), Gaps = 9/189 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+  +          +++ + +         +I    + I   R+S + +  L +   
Sbjct: 55  WAPD-SEYVLCALVKRAMVQAWSVSQPEWTC--KIDEGPAGIAHARWSPDSRHILTTSDF 111

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++S+   +    +        +S  ++ D   +   + R+ K+ ++++ SN  + 
Sbjct: 112 QLRLTVWSLVSTACVHVQWPKHAARGVS--FTQDGKFVAIATRRDCKDYVHLLASNSWEG 169

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAP 395
                       D  WSP  + IA    S  ++ + V   DG    + +       ++  
Sbjct: 170 MGTFAVDTVDLADLEWSPNDNTIA-VWDSSLEYKVLVYSPDGRCLFKYQAYENALGVRTV 228

Query: 396 TWSPSGRSL 404
            WSP G+ L
Sbjct: 229 AWSPCGQFL 237



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 25/233 (10%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +   R+SP+ + +   +      LR+ +           +   +       F+ +GK   
Sbjct: 93  IAHARWSPDSRHILTTSDFQ---LRLTVWSLVSTACVH-VQWPKHAARGVSFTQDGKFVA 148

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDREGKEQLY 329
           I+ ++D    ++   L SN+ E +  T  ++        +SP+ + I    D   + ++ 
Sbjct: 149 IATRRDCKDYVHL--LASNSWEGM-GTFAVDTVDLADLEWSPNDNTIA-VWDSSLEYKVL 204

Query: 330 VMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLL 386
           V   +G    K  + +         WSP G  +    +      I  +            
Sbjct: 205 VYSPDGRCLFKYQAYENALGVRTVAWSPCGQFLGVGSYD----QIARVLNHLTWKPVAEF 260

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
              S+++ P       +++F   ++    S LY  D +  NE   N  +  S 
Sbjct: 261 THTSSVKGPA-----TAVVFKEIEEPFDMSSLYLTD-DRENEIFQNENSGDSH 307


>gi|299742703|ref|XP_001832682.2| TUPA [Coprinopsis cinerea okayama7#130]
 gi|298405307|gb|EAU89102.2| TUPA [Coprinopsis cinerea okayama7#130]
          Length = 778

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/183 (15%), Positives = 60/183 (32%), Gaps = 13/183 (7%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            + D  +   RFSP+ + +A    D     ++ + D             +  I +  FS 
Sbjct: 490 HTGDLYIRSVRFSPDGKFLATGAEDR----QIRIWDISRKCIRHVFDGHQQEIYSLDFSQ 545

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFESDR 322
           +G R ++S   D    I+++   S     +T+ +  N      S + SP ++ +   S  
Sbjct: 546 DG-RLIVSGSGDRTTRIWNMHDHSVKVFTITDVIDPNADAGVTSVAISPSTALVAAGSL- 603

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                + +            +    S +   ++P G  +             V   +  +
Sbjct: 604 --DNIIRIWDVQTGQLLERLRGHTNSVYSVAFTPDGKGLVTGSLDKTLKLWDVSHLNSPE 661

Query: 383 ERL 385
            R 
Sbjct: 662 GRR 664



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 63/170 (37%), Gaps = 17/170 (10%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVF 318
           I + RFS +GK    +  +D  + I+  D+       + +       S  +S D   IV 
Sbjct: 496 IRSVRFSPDGKFLA-TGAEDRQIRIW--DISRKCIRHVFDGHQQEIYSLDFSQDGRLIVS 552

Query: 319 ESDREGKEQLYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            S  +   +++ M  +      I+     + +A       SP   L+A          I 
Sbjct: 553 GSG-DRTTRIWNMHDHSVKVFTITDVIDPNADAGVTSVAISPSTALVAAGSLDN---IIR 608

Query: 375 VMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +      Q  ERL    +++ +  ++P G+ L+       D   KL+ + 
Sbjct: 609 IWDVQTGQLLERLRGHTNSVYSVAFTPDGKGLVTGSL---DKTLKLWDVS 655


>gi|291410727|ref|XP_002721649.1| PREDICTED: WD repeat domain 61, partial [Oryctolagus cuniculus]
          Length = 253

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 7/119 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 113 AFSPDSQYLATGTHVGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  ++I+ +         L        S ++SPDS  +V  SD +G  ++Y + S+ S
Sbjct: 168 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD-DGYIKIYDVSSDKS 224



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 57/155 (36%), Gaps = 12/155 (7%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S   D  + ++ ++      + +        + ++SPDS  +       GK  ++ +
Sbjct: 78  IAASSSLDAHIRLWDLE-NGKQIKSIDAGPVDAWTLAFSPDSQYLA-TGTHVGKVNIFGV 135

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           +S   +    ++ K        +SP G  +A     G    I +      +    +E   
Sbjct: 136 ESGKKEYSLDTRGKF--ILSIAYSPDGKYLASGAIDG---IINIFDIATGKLLHTLEGHA 190

Query: 392 L--QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +  ++ T+SP  + L+ +     D   K+Y +  +
Sbjct: 191 MPIRSLTFSPDSQLLVTASD---DGYIKIYDVSSD 222



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 66/194 (34%), Gaps = 33/194 (17%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQI  K   + P     +A 
Sbjct: 57  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQI--KSIDAGPVDAWTLA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 114 -FSPDSQYLAT---GTHVGKVNI--FGVESGKKEYSL--------------DTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 208

Query: 277 QKDEAMDIYSVDLQ 290
             D  + IY V   
Sbjct: 209 SDDGYIKIYDVSSD 222


>gi|297606890|ref|NP_001059147.2| Os07g0205200 [Oryza sativa Japonica Group]
 gi|255677596|dbj|BAF21061.2| Os07g0205200 [Oryza sativa Japonica Group]
          Length = 296

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 76/242 (31%), Gaps = 27/242 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L       ++   FSP    +  ++ D      + L +T+++            +   +
Sbjct: 39  TLFQGHSGPVYSAMFSPIGDFLLSSSADS----TIRLWNTKLNANLVCYKGHNYPVWDVQ 94

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           FS  G     S   D    I+S+D       R+      ++    +  + + I   S   
Sbjct: 95  FSPVGHYFA-SASHDRTARIWSMDKI--QPLRIMAGHLSDVDCVQWHVNCNYIATGSS-- 149

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +      +  R+     +       SP G  +A     G      +M  D S  
Sbjct: 150 -DKTVRLWDVQTGECIRMFIGHRSMVLSLAMSPDGRYMASGDEDGT-----IMMWDISSG 203

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFS------RKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           R +       +  WS     L +S           D   KL+ +  + +   + +T   +
Sbjct: 204 RCVSPLVGHNSCVWS-----LAYSCEGALLASGSADCTVKLWDVASSTKTLKMDDTKGGS 258

Query: 438 SD 439
           ++
Sbjct: 259 AN 260



 Score = 40.0 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 28/196 (14%), Positives = 60/196 (30%), Gaps = 35/196 (17%)

Query: 128 FRLWDVKDRKQII---GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            RLW+ K    ++   G  +      +  + H  +   +                     
Sbjct: 69  IRLWNTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTA----------------- 111

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   +  MD+    +R +      +    ++  N   +A  + D      V L D 
Sbjct: 112 -------RIWSMDKI-QPLRIMAGHLSDVDCV-QWHVNCNYIATGSSDK----TVRLWDV 158

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +     +     RSM+L+   S +G+    S  +D  + ++ +         L       
Sbjct: 159 QTGECIRMFIGHRSMVLSLAMSPDGRYMA-SGDEDGTIMMWDIS-SGRCVSPLVGHNSCV 216

Query: 305 ISASYSPDSSQIVFES 320
            S +YS + + +   S
Sbjct: 217 WSLAYSCEGALLASGS 232


>gi|194429729|ref|ZP_03062245.1| peptidase, S54 (rhomboid) family [Escherichia coli B171]
 gi|194412210|gb|EDX28516.1| peptidase, S54 (rhomboid) family [Escherichia coli B171]
          Length = 625

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T            S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSLI--LSRDGTKAWVMNRTSNSVSAIDLVAYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+    +   +I  ++  ++  E            +  +
Sbjct: 440 TGTSGKPGAWVMALSPDERTLLV--PGEGRGNIVRINTITHQKEDFPAGDARGTISAMRF 497

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ +     S   +      + Y     SP G  +A   +  +
Sbjct: 498 RPENGEVIFA-DSQGISRISIGDQQTSIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 554

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 555 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 603

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 604 SLDPQAIIRHPQYG 617


>gi|188995333|ref|YP_001929585.1| dipeptidyl peptidase [Porphyromonas gingivalis ATCC 33277]
 gi|188595013|dbj|BAG33988.1| dipeptidyl peptidase [Porphyromonas gingivalis ATCC 33277]
          Length = 723

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 43/319 (13%), Positives = 86/319 (26%), Gaps = 60/319 (18%)

Query: 188 IIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---EDILRVYLMD 243
                  V D D   N+          +  P FSP+ + VA+   ++   +       + 
Sbjct: 115 RHSYRAAVYDYDVRRNLVKPLSEHVGKVMIPTFSPDGRMVAFVRDNNIFIKKFDFDTEVQ 174

Query: 244 TRIDRAPKRIGNFR---------SMILAPRFSSNGKRALISVQKDEAMDIYSVDL----- 289
              D     + N            +     +S++          + A+  Y + +     
Sbjct: 175 VTTDGQINSVLNGATDWVYEEEFGVTNLMSWSADNAFLAFVRSDESAVPEYRMPMYEDKL 234

Query: 290 ---------------QSNATERLTNTLFINI---SASYSPDS--SQIVFESDRE------ 323
                           S  +  L N    N    S     D    +I F  + +      
Sbjct: 235 YPEDYTYKYPKAGEKNSTVSLHLYNVADRNTKSVSLPIDADGYIPRIAFTDNADELAVMT 294

Query: 324 -----GKEQLYVMQSNGSDQKRISQDKEASYFDPVW------SPQGDLIAFTKFSGEKFA 372
                   ++Y +       K I QD    Y D  W      +  G   A+         
Sbjct: 295 LNRLQNDFKMYYVHPKSLVPKLILQDMNKRYVDSDWIQALKFTAGGGF-AYVSEKDGFAH 353

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYSIDLNGRNETL- 430
           I +    G   R +   +      +      ++ +   ++      +Y+ID  GR   L 
Sbjct: 354 IYLYDNKGVMHRRITSGNWDVTKLYGVDASGTVFYQSAEESPIRRAVYAIDAKGRKTKLS 413

Query: 431 --INTPAYASDPQWVGFMD 447
             + T        +  +++
Sbjct: 414 LNVGTNDALFSGNYAYYIN 432



 Score = 44.2 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 80/271 (29%), Gaps = 75/271 (27%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           Y       VY  D R +   K +      ++ P FS +G+       +D  + I   D  
Sbjct: 114 YRHSYRAAVYDYDVRRN-LVKPLSEHVGKVMIPTFSPDGRMVAFV--RDNNIFIKKFDFD 170

Query: 291 SNATERLTNTLFINIS------------------ASYSPDSSQIVFE-SDREGKEQ---- 327
           +    ++T    IN                     S+S D++ + F  SD     +    
Sbjct: 171 T--EVQVTTDGQINSVLNGATDWVYEEEFGVTNLMSWSADNAFLAFVRSDESAVPEYRMP 228

Query: 328 --------------------------LYVMQSNGSDQKRISQDKEASYFDP--VWSPQGD 359
                                     L++      + K +S   +A  + P   ++   D
Sbjct: 229 MYEDKLYPEDYTYKYPKAGEKNSTVSLHLYNVADRNTKSVSLPIDADGYIPRIAFTDNAD 288

Query: 360 LIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL-----------IF 406
            +A    +     F +  +       +L+++D N +          +            +
Sbjct: 289 ELAVMTLNRLQNDFKMYYVHPKSLVPKLILQDMNKRYV----DSDWIQALKFTAGGGFAY 344

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             +KDG   + +Y  D  G     I +  + 
Sbjct: 345 VSEKDG--FAHIYLYDNKGVMHRRITSGNWD 373


>gi|167618424|ref|ZP_02387055.1| hypothetical protein BthaB_19098 [Burkholderia thailandensis Bt4]
 gi|257139783|ref|ZP_05588045.1| hypothetical protein BthaA_11366 [Burkholderia thailandensis E264]
          Length = 391

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 61/381 (16%), Positives = 110/381 (28%), Gaps = 75/381 (19%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D + V +R +D    +        +   S+ 
Sbjct: 13  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYV-YR-FDTDSGRATPVSSAKTENPSYL 70

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +  +G +  YL+ 
Sbjct: 71  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSSEGNDPCYLSL 128

Query: 209 SRDQILFEPR-FS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D        +S    P      +       +    L        P +     + + + 
Sbjct: 129 SPDGRYLVAANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGSGPVKGRQDGAHVHST 188

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q      +YS                      Y+PD S+ +      
Sbjct: 189 VFSPDGKYLFV--QDLGVDKLYSY--------------------RYTPDGSRGL----IG 222

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +           V+S  G     T        +     DG   
Sbjct: 223 PTESRYTLVKAGSGPRHL-----------VFSANGRFAYVTSELNASVDVYRYD-DGRLA 270

Query: 384 RLLVEDSNLQAPTW-----------SPSGRSLIFSRKKDGDTGSKLYSIDLN-------G 425
            +  E   + AP +           SP GR L ++  +       +Y+++         G
Sbjct: 271 HV--ETVPMTAPGFAGKVGGGALHLSPDGRFL-YATNRGDANDIVIYAVNAADGKLKLVG 327

Query: 426 RNETLINTPA-YASDPQ--WV 443
           R  +L  TP  +A DP   W+
Sbjct: 328 RQSSLGKTPREFAIDPSGKWL 348


>gi|83774009|dbj|BAE64134.1| unnamed protein product [Aspergillus oryzae]
          Length = 1299

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 20/200 (10%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           PSRD I    +FSP+ + +A  +      +   L DT      K   + +  I    FS 
Sbjct: 673 PSRDPITQL-KFSPDSRLMAVVSSYMYSHVCR-LWDTSTWVCVKSFED-QGNIRDAAFSP 729

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           + K+   +V +  ++ ++  +  +  +  L +         +S +  ++  +S  +    
Sbjct: 730 DSKQLA-TVSEAGSVRLW--NTHTGRSTFLESASSAVTFVVFSSNGEKLAAKSHGD---- 782

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL- 386
           +         ++ + +  +        SP    IA          + V+  D SQ  +L 
Sbjct: 783 IKAWDLV--SERLLLEIPDERSEIVSISPDCRFIASWN------NLAVIVWDVSQRAVLH 834

Query: 387 -VEDSNLQAPTWSPSGRSLI 405
             E   +    +SP G  LI
Sbjct: 835 THERRGVHTIEFSPEGNLLI 854



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 103/307 (33%), Gaps = 34/307 (11%)

Query: 127  EFRLWDVKDRKQIIGKK---------FFSSPASWRKIAH---TISDDIYQSITGEKGDFN 174
              RLW+    +    +          F S+       +H      D + + +  E  D  
Sbjct: 742  SVRLWNTHTGRSTFLESASSAVTFVVFSSNGEKLAAKSHGDIKAWDLVSERLLLEIPDER 801

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
            S I+ +S         N+L V+  D +    L     + +    FSP    +        
Sbjct: 802  SEIVSISPDCRFIASWNNLAVIVWDVSQRAVLHTHERRGVHTIEFSPEGNLLI-----AS 856

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            +   V   D   +   +   N     L   FS + K  + S+  +  ++++  D  +N  
Sbjct: 857  NDGTVEFWDC-TENILRSYTNIGYKSLVAGFSPDSKNIV-SLSTNGQINVW--DWTTNEF 912

Query: 295  ERLTNTLFINISASYS--------PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            +  +N   I+ S  YS        P   ++      +G E ++           I +   
Sbjct: 913  K--SNIHHISDSVDYSLYCGKVSFPRFGELAASLVADGPEDIWTFIP--GVLTEIYRFSG 968

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                   +SP G +IA +    E+  I       S+    + +  +   +++P+G  +  
Sbjct: 969  RMMDALAFSPDGKIIAASACWTEEITIWNGSSKVSEALGDIHEDTITGLSFAPNGTVVA- 1027

Query: 407  SRKKDGD 413
            S  KDG 
Sbjct: 1028 SAAKDGT 1034


>gi|322702928|gb|EFY94547.1| WD repeat protein [Metarhizium anisopliae ARSEF 23]
          Length = 857

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 54/158 (34%), Gaps = 11/158 (6%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKD-----EAMDIYSVDLQSNATERLTNTLFINISA 307
           +   R  +   +FS +G +       D     E      V   S   ++  +      S 
Sbjct: 536 LTEMRGEVWEVQFSHDGTQLAACGSSDSVFIWETWSFQVVHALSMQVQK--DHHSGVASI 593

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD S +V  S  +   +L+   +      +  +  +      +WS            
Sbjct: 594 AWSPDDSMMVTCSQ-DHFARLW--DTKNGQLIKKLKRFDEPVSSCIWSSDSKSFVLGTLD 650

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            ++ +I     +G +     +   +QA   SP GR L+
Sbjct: 651 NKR-SICTFNSEGEELVQWDKKHRVQAMAGSPDGRWLV 687



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 50/281 (17%), Positives = 89/281 (31%), Gaps = 41/281 (14%)

Query: 113 TGRVIKEGKDRLRVEF------RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
              +     D + V        RLWD K+ + I   K F  P S                
Sbjct: 590 VASIAWSPDDSMMVTCSQDHFARLWDTKNGQLIKKLKRFDEPVS---------------S 634

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                D  S +L       +   K S+C  + +G  +                SP+ + +
Sbjct: 635 CIWSSDSKSFVL------GTLDNKRSICTFNSEGEELVQWDKKHRVQAM--AGSPDGRWL 686

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                D+   + VY   TR       +G      ++   S + ++ L+        +   
Sbjct: 687 --VAADNFTNMYVYNGITRALEYELDLGAQP---ISLAISQDSRQLLV---NKGDSEAQL 738

Query: 287 VDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +DL + AT +       +   I AS+   +   V     +GK  ++     G+  +R+S 
Sbjct: 739 IDLFTRATVQKFLGHMTDQCVIRASFGGANESFVMSGSEDGKVVIWHKNI-GAAVERLSS 797

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                    VW+P    +  +     K  I   +K G   R
Sbjct: 798 FSGKRCNCVVWNPADPYMLASCNDDGKVRIWANRKRGVDIR 838



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 53/150 (35%), Gaps = 16/150 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-----NFRSMILAPRFSSNGKRAL 273
           FS +  ++A           V++ +T   +    +      +  S + +  +S +    +
Sbjct: 548 FSHDGTQLAAC----GSSDSVFIWETWSFQVVHALSMQVQKDHHSGVASIAWSPD-DSMM 602

Query: 274 ISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           ++  +D    ++  D ++    ++L        S  +S DS   V     + K  +    
Sbjct: 603 VTCSQDHFARLW--DTKNGQLIKKLKRFDEPVSSCIWSSDSKSFV-LGTLDNKRSICTFN 659

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           S G +  +   DK+        SP G  + 
Sbjct: 660 SEGEELVQ--WDKKHRVQAMAGSPDGRWLV 687


>gi|257056387|ref|YP_003134219.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase
           [Saccharomonospora viridis DSM 43017]
 gi|256586259|gb|ACU97392.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase
           [Saccharomonospora viridis DSM 43017]
          Length = 711

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/202 (13%), Positives = 56/202 (27%), Gaps = 59/202 (29%)

Query: 220 SPNQQKVAYATYDD--EDILRVYLMDTRIDRAPKRI------------------------ 253
           SP+  +V +       +    +YL+D R       +                        
Sbjct: 41  SPDGSRVLFQRSRTATDRRNNLYLLDMRTGEESVVVDAAALLPGEEELPPEERARRERVR 100

Query: 254 ---GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              G          F    +    S+       +Y+VDL S     L +   ++      
Sbjct: 101 EASGGVVGYATDAAF----RVVAFSLSG----KLYTVDLDSRDVRLLVDAAVVD--PRPD 150

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------W 354
           P  + + + SDR    +L V++      + ++ D+ A     +                W
Sbjct: 151 PTGTHVAYVSDR----RLRVVELASGADRALTPDEGADITWGLAEFIAAEELNRTRGYWW 206

Query: 355 SPQGDLIAFTKFSGEKFAIGVM 376
           SP G  +   +          +
Sbjct: 207 SPDGKTLLVQRTDHTGVPTWTI 228



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 44/284 (15%), Positives = 86/284 (30%), Gaps = 47/284 (16%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            G         +  VV+  +   L  +D D  ++R L    D  + +PR  P    VAY 
Sbjct: 103 SGGVVGYATDAAFRVVAFSLSGKLYTVDLDSRDVRLLV---DAAVVDPRPDPTGTHVAYV 159

Query: 230 TYDDEDILRVYLMDTR--IDRAPKRIGNFRSMILAPR---------FSSNGKRALISVQK 278
           +     ++ +     R         I    +  +A           +S +GK  L+    
Sbjct: 160 SDRRLRVVELASGADRALTPDEGADITWGLAEFIAAEELNRTRGYWWSPDGKTLLVQRTD 219

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--ESDREGKEQLYVMQSNGS 336
              +  +++                  + +     + + +     R     L  +  +GS
Sbjct: 220 HTGVPTWTI-----------ADPAHPDTPA-----TTVAYPAAGTRNASVSLSFLGLDGS 263

Query: 337 DQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA- 394
               + +          WS  G  LIA       +  I  +       RLL  + + +  
Sbjct: 264 RVD-VQRGDWEYLVAAHWSAAGPPLIAVQPRDQRRLEIYALDPRSGSARLLCHEEDERWV 322

Query: 395 ------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                 P W+  GR +    + D       Y + ++G   T + 
Sbjct: 323 EVVTGVPAWTAEGRLVHVGVRDD------TYRVLVDGEPVTPVG 360


>gi|241954790|ref|XP_002420116.1| WD repeat-containing protein, putative [Candida dubliniensis CD36]
 gi|223643457|emb|CAX42336.1| WD repeat-containing protein, putative [Candida dubliniensis CD36]
          Length = 520

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 53/319 (16%), Positives = 102/319 (31%), Gaps = 73/319 (22%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + SG   ++  + D +     +        +    +SP+ + +A  + D+     + 
Sbjct: 159 SSRMCSGAGDSTARIWDCNTQTPLHTLSGHSNWVLCVTYSPDGKLIATGSMDN----TIR 214

Query: 241 LMDTRIDRA-PKRIGNFRSMILAPRFSS-------NGKRALISVQKDEAMDIYSVDLQSN 292
           L D    +   K +      + +  +         +  R + S  KD  + I+    ++ 
Sbjct: 215 LWDATTGKPVGKPLLGHSKWVSSLSWEPLHLVKANDNPRLV-SGSKDGTVKIWDTTARTC 273

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L++         +S   S IV+ +  +   + + + +NG   K I   K  +++  
Sbjct: 274 TMT-LSSHTGAVSCVKWS--GSNIVYSASHDKTIKAWDISANG---KCIQTLKSHAHWVN 327

Query: 353 VWSPQGDLIA-----------FTKFSGEKFAIG-------VMKKDGS-QERLLVEDSNLQ 393
             S   D +             T +S E+           V K +GS  ERL+    +  
Sbjct: 328 HLSLSTDYVLRKGGFDHTSTKITHYSPEELRTRALQQYEKVAKLNGSINERLVTASDDFT 387

Query: 394 APTW------------------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              W                        SP GR ++ S     D   KL+    +G   T
Sbjct: 388 MYFWEPLKSSKPICRMTGHQKLVNHVNFSPDGRFVVSSS---FDNSIKLW----DGIRGT 440

Query: 430 LINTPAYASDP----QWVG 444
            I+T      P     W  
Sbjct: 441 FISTLRGHVAPVYQTAWSA 459



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 41/123 (33%), Gaps = 5/123 (4%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +    +  +   R+   + ++    FS +G R ++S   D ++ ++   ++      L  
Sbjct: 390 FWEPLKSSKPICRMTGHQKLVNHVNFSPDG-RFVVSSSFDNSIKLWD-GIRGTFISTLRG 447

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            +      ++S D+  +V  S       L V                   +   WS  G 
Sbjct: 448 HVAPVYQTAWSADNRLLVSCSK---DTTLKVWDIRTKKLSVDLPGHSDEVYAVDWSLDGK 504

Query: 360 LIA 362
            +A
Sbjct: 505 RVA 507


>gi|219687753|dbj|BAH09387.1| allergen [Arthroderma vanbreuseghemii]
          Length = 726

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 74/237 (31%), Gaps = 37/237 (15%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S  IY S+      +++ +     +V SG +  S      DG     + P +      P 
Sbjct: 166 SARIYDSLFVRH--WDTYVGTQFNAVFSGALTKSGDKYSFDGKLKNLVHPVKYAESPYPP 223

Query: 219 F--------SPNQQKVAYAT---------------YDDEDILRVYLMDTRIDRAPKRIGN 255
           F        S + + VA+ +               +                  P+    
Sbjct: 224 FGGSGDYDLSSDGKTVAFMSKAPELPKANLTTTYIFVVPHDGSRVAEPINKRNGPRTPQG 283

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISAS-- 308
                 +P FS +GKR        +  +     IY  ++ SN   +   +   + S    
Sbjct: 284 IEGASSSPVFSPDGKRIAYLQMATKNYESDRRVIYIAEVGSNKPVQRIASN-WDRSPEVV 342

Query: 309 -YSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLI 361
            +S D   +   ++     +L+ + ++  D      +  D   S F  V S +  LI
Sbjct: 343 KWSSDGRTLYVTAEDHATGKLFTLPADARDSHKPAVVKHDGSVSSFYFVGSSKSVLI 399



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/206 (18%), Positives = 74/206 (35%), Gaps = 35/206 (16%)

Query: 265 FSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTL----------FINISA 307
            SS+GK      +  E          I+ V    +      N              + S 
Sbjct: 232 LSSDGKTVAFMSKAPELPKANLTTTYIFVVPHDGSRVAEPINKRNGPRTPQGIEGASSSP 291

Query: 308 SYSPDSSQIVF--------ESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQG 358
            +SPD  +I +        ESDR     +Y+ +   +   +RI+ + + S     WS  G
Sbjct: 292 VFSPDGKRIAYLQMATKNYESDR---RVIYIAEVGSNKPVQRIASNWDRSPEVVKWSSDG 348

Query: 359 DLIAFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             +  T     +G+ F +    +D  +  ++  D ++ +  +  S +S++ S        
Sbjct: 349 RTLYVTAEDHATGKLFTLPADARDSHKPAVVKHDGSVSSFYFVGSSKSVLISGNS--LWS 406

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQ 441
           + L+ +   GR    +   A   DP+
Sbjct: 407 NALFQVATPGRPNRKLFY-ANEHDPE 431



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 33/276 (11%), Positives = 77/276 (27%), Gaps = 50/276 (18%)

Query: 211 DQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           D  + E  +  +  K+ Y   T   +  + +++ D +      + G+        + + +
Sbjct: 77  DSDVSEITWLGDGTKIVYVNGTDSVKGGVGIWISDAKNFGNAYKAGSVNGAFSGLKLAKS 136

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT-------------ERLTNTLFINISASYS----P 311
           G +                +  +                      +    +A +S     
Sbjct: 137 GDKINFVGYGQSTTKGDLYNEAAAKEAVSSARIYDSLFVRHWDTYVGTQFNAVFSGALTK 196

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              +  F    +GK +  V     ++           Y     S  G  +AF   + E  
Sbjct: 197 SGDKYSF----DGKLKNLVHPVKYAESPYPPFGGSGDY---DLSSDGKTVAFMSKAPELP 249

Query: 372 A-------IGVMKKDGSQERLLVE-----------DSNLQAPTWSPSGRSLIFSRKKDGD 413
                   I V+  DGS+    +            +    +P +SP G+ + + +    +
Sbjct: 250 KANLTTTYIFVVPHDGSRVAEPINKRNGPRTPQGIEGASSSPVFSPDGKRIAYLQMATKN 309

Query: 414 TGSK---LYSIDLNGRNETLINTPAYASDP---QWV 443
             S    +Y  ++            +   P   +W 
Sbjct: 310 YESDRRVIYIAEVGSNKPVQRIASNWDRSPEVVKWS 345


>gi|195623942|gb|ACG33801.1| WD-repeat protein-like [Zea mays]
          Length = 435

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 49/153 (32%), Gaps = 9/153 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +  A       D     L+D    +   ++        A  ++ +G+    +  +D
Sbjct: 273 SPDGKLAAIV----GDSPDGLLIDANSGKTVHKLHGHLDYSFASAWNPDGRTFA-TGNQD 327

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +   ++ V   S +   L   +    S  Y+ D   +      E  + +++        +
Sbjct: 328 KTCRVWDVRNLSRSVVVLGGNIGAVRSIRYTSDGKFMAMT---EPADFIHIFDVESGYSR 384

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +   D         +SP  + + F       F 
Sbjct: 385 KQELDFFGEIAGISFSPDTEAL-FVGVHDRFFN 416



 Score = 40.0 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 53/119 (44%), Gaps = 7/119 (5%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           ++D +     +         F   ++P+ +   +AT + +   RV+ +   + R+   +G
Sbjct: 290 LIDANSGKTVHKLHGHLDYSFASAWNPDGR--TFATGNQDKTCRVWDVR-NLSRSVVVLG 346

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPD 312
                + + R++S+GK   ++   + A  I+  D++S  + ++  +        S+SPD
Sbjct: 347 GNIGAVRSIRYTSDGKFMAMT---EPADFIHIFDVESGYSRKQELDFFGEIAGISFSPD 402


>gi|167562069|ref|ZP_02354985.1| hypothetical protein BoklE_05852 [Burkholderia oklahomensis EO147]
          Length = 391

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 51/324 (15%), Positives = 94/324 (29%), Gaps = 64/324 (19%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           L V     SG     +   D D   +  ++ ++ +       S + + V        D  
Sbjct: 31  LLVGTYTGSGSEGIYVYRFDTDSGRMTPVSSAKTENPSYLVASRDGRHVYAVNELPGDAG 90

Query: 238 RV----------YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---ISVQKDEAMDI 284
                       +   T       R+ +  +       S +GK  +    SV  D     
Sbjct: 91  PAGVRGGVSAFDFDAKTGALAFVNRVSSEGNDPCYLSLSPDGKYLVAANYSVASDPGGSF 150

Query: 285 YSVDLQ---------------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
             + ++                    +         SA +SPD   + F  D  G +++Y
Sbjct: 151 SVLPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHSAVFSPDGKYL-FVQD-LGADKVY 208

Query: 330 VMQSNGSDQKRISQDKEASYF---------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +      + +    +A Y            V+   G     T        +     DG
Sbjct: 209 SYRYTPDGSRGLVGPTDARYTLVKPGSGPRHLVFGANGRFAYVTDELNASVDVYRYD-DG 267

Query: 381 SQERLLVEDSNLQAPTW-----------SPSGRSLIFSRKKDGDTGSKLYSIDLN----- 424
               +  E  ++ AP +           SP GR L ++  +       +Y++        
Sbjct: 268 RLAHV--ETVSMTAPGFAGKVGGSALHLSPDGRFL-YASNRGDANDIVIYAVSAADGKLK 324

Query: 425 --GRNETLINTPA-YASDPQ--WV 443
             GR  +L  TP  +A DP   W+
Sbjct: 325 LVGRQSSLGRTPREFAIDPSGKWL 348


>gi|2570829|gb|AAC46184.1| dipeptidyl peptidase IV [Porphyromonas gingivalis]
          Length = 723

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 86/319 (26%), Gaps = 60/319 (18%)

Query: 188 IIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---EDILRVYLMD 243
                  V D D   N+          +  P FSP+ + VA+   ++   +       + 
Sbjct: 115 RHSYRAAVYDYDVRRNLVKPLSEHVGKVMIPTFSPDGRMVAFVRDNNIFIKKFDFDTEVQ 174

Query: 244 TRIDRAPKRIGNFR---------SMILAPRFSSNGKRALISVQKDEAMDIYSVDL----- 289
              D     I N            +     +S++          + A+  Y + +     
Sbjct: 175 VTTDGQINSILNGATDWVYEEEFGVTNLMSWSADNAFLAFVRSDESAVPEYRMPMYEDKI 234

Query: 290 ---------------QSNATERLTNTLFINI---SASYSPDS--SQIVFESDRE------ 323
                           S  +  L N    N    S     D    +I F  + +      
Sbjct: 235 YPEDYTYKYPKAGEKNSTVSLHLYNVADRNTKSVSLPIDADGYIPRIAFTDNADELAVMT 294

Query: 324 -----GKEQLYVMQSNGSDQKRISQDKEASYFDPVW------SPQGDLIAFTKFSGEKFA 372
                   ++Y +       K I QD    Y D  W      +  G   A+         
Sbjct: 295 LNRLQNDFKMYYVHPKSLVAKLILQDMNKRYVDSDWIQALKFTAGGGF-AYVSEKDGFAH 353

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYSIDLNGRNETL- 430
           I +    G   R +   +      +      ++ +   ++      +Y+ID  GR   L 
Sbjct: 354 IYLYDNKGVMHRRITSGNWDVTKLYGVDASGTVFYQSAEESPIRRAVYAIDAKGRKTKLS 413

Query: 431 --INTPAYASDPQWVGFMD 447
             + T        +  +++
Sbjct: 414 LNVGTNDALFSGNYAYYIN 432



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 80/271 (29%), Gaps = 75/271 (27%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           Y       VY  D R +   K +      ++ P FS +G+       +D  + I   D  
Sbjct: 114 YRHSYRAAVYDYDVRRN-LVKPLSEHVGKVMIPTFSPDGRMVAFV--RDNNIFIKKFDFD 170

Query: 291 SNATERLTNTLFINI------------------SASYSPDSSQIVFE-SDREGKEQ---- 327
           +    ++T    IN                     S+S D++ + F  SD     +    
Sbjct: 171 T--EVQVTTDGQINSILNGATDWVYEEEFGVTNLMSWSADNAFLAFVRSDESAVPEYRMP 228

Query: 328 --------------------------LYVMQSNGSDQKRISQDKEASYFDP--VWSPQGD 359
                                     L++      + K +S   +A  + P   ++   D
Sbjct: 229 MYEDKIYPEDYTYKYPKAGEKNSTVSLHLYNVADRNTKSVSLPIDADGYIPRIAFTDNAD 288

Query: 360 LIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL-----------IF 406
            +A    +     F +  +       +L+++D N +          +            +
Sbjct: 289 ELAVMTLNRLQNDFKMYYVHPKSLVAKLILQDMNKRYV----DSDWIQALKFTAGGGFAY 344

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             +KDG   + +Y  D  G     I +  + 
Sbjct: 345 VSEKDG--FAHIYLYDNKGVMHRRITSGNWD 373


>gi|326480079|gb|EGE04089.1| periodic tryptophan protein 2 [Trichophyton equinum CBS 127.97]
          Length = 911

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 85/213 (39%), Gaps = 22/213 (10%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +A+ +     +L V+   +      K+ G+  SM  A  +S +G++  I+   D  
Sbjct: 304 SGEWLAFGSSKLGQLL-VWEWQSE-SYILKQQGHLDSMN-ALVYSPDGRKI-ITAADDGK 359

Query: 282 MDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           + ++  D+++       T       +  ++   + ++F +  +G  + + +     + K 
Sbjct: 360 IKVW--DIKTGFCIVTFTEHKSGVTACEFTKRGN-VLFTASLDGSVRAWDL-VRYRNFKT 415

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----T 396
            +     S+      P G+++         F I +        +LL + S  + P    +
Sbjct: 416 FTAPSRLSFSSLAVDPSGEIVCAGSLD--SFDIHIWSVQTG--QLLDQLSGHEGPVSSLS 471

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           +S  G  ++       D   +++SI   GR++T
Sbjct: 472 FSADGSHVVSGSW---DRTVRIWSIF--GRSQT 499



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 67/197 (34%), Gaps = 13/197 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ +K+  A  D +    + + D +           +S + A  F+  G   L +   
Sbjct: 344 YSPDGRKIITAADDGK----IKVWDIKTGFCIVTFTEHKSGVTACEFTKRGN-VLFTASL 398

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++    +  T    ++ S S + D S  +  +       +++        
Sbjct: 399 DGSVRAWDL-VRYRNFKTFTAPSRLSFS-SLAVDPSGEIVCAGSLDSFDIHIWSVQTGQL 456

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLLVEDSNLQAPT 396
                  E       +S  G  +    +      I  +  +   S+   L   S++    
Sbjct: 457 LDQLSGHEGPVSSLSFSADGSHVVSGSWD-RTVRIWSIFGRSQTSEPLQL--QSDVLCVA 513

Query: 397 WSPSGRSLIFSRKKDGD 413
           + P GR +  +   DG 
Sbjct: 514 FRPDGRQIA-ASTLDGQ 529



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D   +++   +  +   ++      + +  FS++G   ++S   D  + I+S+  +S  +
Sbjct: 442 DSFDIHIWSVQTGQLLDQLSGHEGPVSSLSFSADGSH-VVSGSWDRTVRIWSIFGRSQTS 500

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           E L       +  ++ PD  QI   S  +G+   + +
Sbjct: 501 EPL-QLQSDVLCVAFRPDGRQIA-ASTLDGQLTFWSV 535



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 5/81 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  +    FS +   V   ++D      V +               +S +L   F 
Sbjct: 460 LSGHEGPVSSLSFSADGSHVVSGSWDR----TVRIWSIFGRSQTSEPLQLQSDVLCVAFR 515

Query: 267 SNGKRALISVQKDEAMDIYSV 287
            +G++   +   D  +  +SV
Sbjct: 516 PDGRQIA-ASTLDGQLTFWSV 535


>gi|304393376|ref|ZP_07375304.1| WD repeat-containing protein [Ahrensia sp. R2A130]
 gi|303294383|gb|EFL88755.1| WD repeat-containing protein [Ahrensia sp. R2A130]
          Length = 328

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 19/150 (12%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              +I+  A+  P  +   F + R       V  ++    KRI  D E +     ++P+G
Sbjct: 84  TGKWIDTIAA-GPRGA-CAFAAGRS------VWIADEGSVKRI--DHERAVEGLAFAPKG 133

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             IA  +++G     G     G     L  D      ++SP G+ ++ +  ++   G +L
Sbjct: 134 VRIAAARYNGVSLHWG----AGGDVSELHWDGAHTGVSFSPDGKYIVTTMAENALHGWRL 189

Query: 419 -----YSIDLNGRNETLINTPAYASDPQWV 443
                 S   +G +  +   PA      W 
Sbjct: 190 DQLKAGSKPEDGGHMRMSGYPAKPKSMSWS 219



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 90/288 (31%), Gaps = 36/288 (12%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           + GK   +     R     ++    + I  E G +   I        +     S+ + D 
Sbjct: 55  LDGKSLLTGGEDGRVA--RVTQQGVELIAEETGKWIDTIAAGPRGACAFAAGRSVWIAD- 111

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           +G+  R      ++ +    F+P   ++A A Y+         +          + ++  
Sbjct: 112 EGSVKRI---DHERAVEGLAFAPKGVRIAAARYNG------VSLHWGAGGDVSEL-HWDG 161

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVD-------LQSNATERLTNTLFINISASYSP 311
                 FS +GK  + ++ ++ A+  + +D        +     R++       S S+S 
Sbjct: 162 AHTGVSFSPDGKYIVTTMAEN-ALHGWRLDQLKAGSKPEDGGHMRMSGYPAKPKSMSWSK 220

Query: 312 DSSQIVFESDREGKEQLYVMQ------SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             + +       G +              G   K +    +A      + P  D++A   
Sbjct: 221 KGTWLA----SSGAQAAICWPFAGKTGPQGKAPKELGTRGDALVMQVAFHPVEDVVAVGY 276

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKD 411
             G   A+ V       E LL    N +  +  W   G  L F     
Sbjct: 277 NDGMVAAVRVEDA---HEALLRRSGNGEITSLNWDEKGDRLAFGTANG 321


>gi|289742749|gb|ADD20122.1| G protein beta subunit-like protein [Glossina morsitans morsitans]
          Length = 315

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 62/168 (36%), Gaps = 16/168 (9%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           VYL D + +   + I    + I     S +G+    +V       I+S  L S+  ++LT
Sbjct: 148 VYLWDVKSEVHEQLIPEVDASIQDVAISPDGQYMA-AVNNKGNCYIWS--LSSSPNQKLT 204

Query: 299 N---------TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                          +   +SPDS  +V  S  +G  +++    + +  + +  +    +
Sbjct: 205 TLQPKLKIAAHKRYVLRCKFSPDSRLLVTTSG-DGTARIWKSD-DFTMWRELCIEGYWVW 262

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            D  +S     + FT  S     +  ++    + +       + A ++
Sbjct: 263 -DAAFSADSKYL-FTASSDGIARLWKLQTKNPERKYTGHTKAITALSF 308



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 63/159 (39%), Gaps = 11/159 (6%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     + + D        L P  D  + +   SP+ Q +A    +++    ++ + +  
Sbjct: 142 GAQNGGVYLWDVKSEVHEQLIPEVDASIQDVAISPDGQYMA--AVNNKGNCYIWSLSSSP 199

Query: 247 DRAPK------RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           ++         +I   +  +L  +FS +  R L++   D    I+  D        L   
Sbjct: 200 NQKLTTLQPKLKIAAHKRYVLRCKFSPD-SRLLVTTSGDGTARIWKSD-DFTMWRELCIE 257

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            +    A++S DS  + F +  +G  +L+ +Q+   ++K
Sbjct: 258 GYWVWDAAFSADSKYL-FTASSDGIARLWKLQTKNPERK 295



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 75/212 (35%), Gaps = 23/212 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P++ ++A   Y     +R+Y +++          + +  I    F  +G     +  +D 
Sbjct: 48  PDKTRLAACGY---QCIRLYDLESNCTVPVINFESVQKNITRLGFQEDGNWM-YTAGEDH 103

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + I+ +   +    R+ +      +A   P+  +I   +   G   +Y+        ++
Sbjct: 104 RVRIWDMLSATPHCSRVFDCQAPVNAACLHPNQVEIAMGAQNGG---VYLWDVKSEVHEQ 160

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----------EDS 390
           +  + +AS  D   SP G  +A     G      +     S  + L              
Sbjct: 161 LIPEVDASIQDVAISPDGQYMAAVNNKG---NCYIWSLSSSPNQKLTTLQPKLKIAAHKR 217

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +    +SP  R L+ +    GD  ++++  D
Sbjct: 218 YVLRCKFSPDSRLLVTTS---GDGTARIWKSD 246


>gi|260462321|ref|ZP_05810529.1| transcriptional regulator domain protein [Mesorhizobium
           opportunistum WSM2075]
 gi|259031815|gb|EEW33083.1| transcriptional regulator domain protein [Mesorhizobium
           opportunistum WSM2075]
          Length = 501

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 52/139 (37%), Gaps = 11/139 (7%)

Query: 35  FVKVATNSANYSPVSIAFTKFVSIDELGGK------VSEVVSKDLQRSDVFNLISQ-DSF 87
               A   +   P+ +A  +F +              +E +   L R     ++++  SF
Sbjct: 100 PETEAVPESGAQPI-VAVLRFRNDGADPANQEIVDGFAEDIINGLARFGTVTVLARNSSF 158

Query: 88  KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS 147
                +P   P  +  + +GA  LV G V ++ + R+     L D  +  Q+ G ++ + 
Sbjct: 159 SFASHSPAEWPAIR--SRIGADYLVEGSVRRQAE-RIIAAVSLIDAANSAQLWGDRYQAE 215

Query: 148 PASWRKIAHTISDDIYQSI 166
            A    I   I + I   +
Sbjct: 216 AAGLFTIQQDIVEQIVGRL 234


>gi|271968353|ref|YP_003342549.1| serine/threonine protein kinase-like protein [Streptosporangium
           roseum DSM 43021]
 gi|270511528|gb|ACZ89806.1| Serine/threonine protein kinase-like protein [Streptosporangium
           roseum DSM 43021]
          Length = 1194

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 61/364 (16%), Positives = 106/364 (29%), Gaps = 67/364 (18%)

Query: 126 VEFRLWDVKDRKQIIG-------------KKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           +E +LWDV   +                 + FF        +A      I+  +TGEK  
Sbjct: 638 LELKLWDVAKGRPTGATLTVQGREAGGDTQVFFGQAEDRVLVAEGEKLTIWNPVTGEKQL 697

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA--- 229
                +    S         L V   DG  +        +I    R      +VAY+   
Sbjct: 698 SPVTGVDFDTSADG----RGLAVGGLDGEPVALALAGLRRIPLGSRCDACGLRVAYSPDG 753

Query: 230 -TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK------------------ 270
            T        V L D       +R           RFS +G+                  
Sbjct: 754 RTVAVGRGKSVQLRDAFTGADLERPFTS-GNGGDLRFSPDGRFLAAADETSIKLWRVQDG 812

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLT------------------NTLFINISASYSPD 312
           R L++ + D  M   + D        LT                       +  A  SPD
Sbjct: 813 RLLLTQRIDAFMPAVAFDPDGRTLRYLTEEAVTTLDITALTRPVVLKGPGTHW-AQLSPD 871

Query: 313 SSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              +     + G+ +L+ V +        +  +    YF+  +S  G  +A     G+  
Sbjct: 872 GRLLASRDSQAGEVRLWDVRRRKPLAALTVGPEGADGYFEMAFSGDGRRLA-VNTGGQSS 930

Query: 372 AIGVMKKDGSQERLLVEDSNL-QAPTWS--PSGRSLI-FSRKKDGD--TGSKLYSIDLNG 425
            + +      +    VE +   Q P  +    G ++  +    D +   G +++  D+ G
Sbjct: 931 RLTIWDTATFRRLTTVETAREGQVPALAMNADGTAVASYVLYYDSEKAPGGEVHLWDVPG 990

Query: 426 RNET 429
               
Sbjct: 991 GRHR 994



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 64/198 (32%), Gaps = 22/198 (11%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             F P+ + + Y T +        +    I    + +          + S +G+       
Sbjct: 828  AFDPDGRTLRYLTEEA-------VTTLDITALTRPVVLKGPGTHWAQLSPDGRLLASRDS 880

Query: 278  KDEAMDIYSVDLQSNATERLTNTL-FINI--SASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +   + ++ V  +      LT      +     ++S D  ++       G +   +   +
Sbjct: 881  QAGEVRLWDVRRR-KPLAALTVGPEGADGYFEMAFSGDGRRLAVN---TGGQSSRLTIWD 936

Query: 335  GSDQKRISQ---DKEASYFDPVWSPQGDLIA-----FTKFSGEKFAIGVMKKDGSQERLL 386
             +  +R++     +E        +  G  +A     +         + +    G + R  
Sbjct: 937  TATFRRLTTVETAREGQVPALAMNADGTAVASYVLYYDSEKAPGGEVHLWDVPGGRHRWS 996

Query: 387  VEDSNLQAPTWSPSGRSL 404
            V    ++A  ++P GR++
Sbjct: 997  VAQEYVEALRFTPDGRAV 1014



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 50/342 (14%), Positives = 103/342 (30%), Gaps = 64/342 (18%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E R+WDV+  ++  G  F       R IA + S      +    G    ++  V++   +
Sbjct: 598 EVRIWDVRSGRRAGG--FRGVGDDLRGIALSPS----GRLLAVIGGLELKLWDVAKGRPT 651

Query: 187 GIIKNSL-----------------CVMDRDGANIRYLTPSRDQILFEP----RF--SPNQ 223
           G                        V+  +G  +    P   +    P     F  S + 
Sbjct: 652 GATLTVQGREAGGDTQVFFGQAEDRVLVAEGEKLTIWNPVTGEKQLSPVTGVDFDTSADG 711

Query: 224 QKVAYATYDDEDI------LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           + +A    D E +      LR   + +R D    R+           +S +G+   +   
Sbjct: 712 RGLAVGGLDGEPVALALAGLRRIPLGSRCDACGLRV----------AYSPDGRTVAV--- 758

Query: 278 KDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                 +   D  + A      T+    ++   +SPD   +    +      + + +   
Sbjct: 759 -GRGKSVQLRDAFTGADLERPFTSGNGGDL--RFSPDGRFLAAADETS----IKLWRVQD 811

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                ++Q  +A      + P G  + +        A+  +        ++++       
Sbjct: 812 GRL-LLTQRIDAFMPAVAFDPDGRTLRYLTEE----AVTTLDITALTRPVVLKGPGTHWA 866

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             SP GR L    +       +L+ +        L   P  A
Sbjct: 867 QLSPDGRLLA--SRDSQAGEVRLWDVRRRKPLAALTVGPEGA 906


>gi|124006073|ref|ZP_01690910.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
 gi|123988480|gb|EAY28126.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
          Length = 458

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 67/226 (29%), Gaps = 66/226 (29%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERL---------------------------- 297
           S +GK       +            S    RL                            
Sbjct: 67  SPDGKYLFFMTGRGGQPW-------SGRPSRLWKGKLEYSGDIWYSQKMGKKWLMPRALP 119

Query: 298 --TNTLFINISASYSPDSSQIVFES-----DREGKEQL-------YVMQSNGSD------ 337
              NT       + SP+  ++ F+S     +R+G           Y  +  G        
Sbjct: 120 ATINTDNGEDEPNVSPNGQRVYFQSWYSGWERKGGPYYSARLYGNYWSRPKGLGGGINAF 179

Query: 338 -QKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEKFAIGVMKKDGSQERLLVED------ 389
            Q+R    +E +      S  G   I           + + +K       L++       
Sbjct: 180 FQRRQELGQELATDGATMSADGKTFIVAVGPYSGNMNLYISRKGRRGRWSLLKRLSVSTM 239

Query: 390 SNLQAPTWSPSGRSLIFS-RKKDGDTGSKLY--SIDLNGRNETLIN 432
            N ++PT +  G++L F+     G  G  ++  +I+ +G +  ++N
Sbjct: 240 GNERSPTLAADGKTLYFASSGYGGYGGLDIFKTTINQDGSHSKVVN 285



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 48/136 (35%), Gaps = 24/136 (17%)

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               +L N+ +   +   SPD   + F + R G+              R+    +  Y  
Sbjct: 50  KNLYQL-NSRYRETNVCISPDGKYLFFMTGRGGQPW-------SGRPSRL-WKGKLEYSG 100

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            +W        +++  G+K    +M +  +    +  D+    P  SP+G+ + F     
Sbjct: 101 DIW--------YSQKMGKK---WLMPR--ALPATINTDNGEDEPNVSPNGQRVYFQSWYS 147

Query: 412 G--DTGSKLYSIDLNG 425
           G    G   YS  L G
Sbjct: 148 GWERKGGPYYSARLYG 163



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 44/137 (32%), Gaps = 24/137 (17%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFRSMIL-- 261
           T + D    EP  SPN Q+V + ++    +      Y      +   +  G    +    
Sbjct: 121 TINTDNGEDEPNVSPNGQRVYFQSWYSGWERKGGPYYSARLYGNYWSRPKGLGGGINAFF 180

Query: 262 -------------APRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----TERLT-NTLF 302
                            S++GK  +++V          +  +         +RL+ +T+ 
Sbjct: 181 QRRQELGQELATDGATMSADGKTFIVAVGPYSGNMNLYISRKGRRGRWSLLKRLSVSTMG 240

Query: 303 INISASYSPDSSQIVFE 319
              S + + D   + F 
Sbjct: 241 NERSPTLAADGKTLYFA 257


>gi|89889840|ref|ZP_01201351.1| OmpA family protein [Flavobacteria bacterium BBFL7]
 gi|89518113|gb|EAS20769.1| OmpA  family protein [Flavobacteria bacterium BBFL7]
          Length = 625

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 67/206 (32%), Gaps = 47/206 (22%)

Query: 285 YSVDLQSNATERLTNTLFINISAS-YSPD--SSQIVFESDREGKEQLYVM---------- 331
           Y  D+           L +N  AS ++      +I F S R  K   Y            
Sbjct: 133 YLADITGMNPAYTAEALGLNGEASDFAAQKIGDKIYFASARNNKRANYAWNKEPYLDIYE 192

Query: 332 ---QSNG--SDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSG------------EKFA 372
                NG   + K +  D    Y +     +P G  + FT+                K  
Sbjct: 193 ASVDENGMPGEGKLLDGDVNTKYHEGTLDITPDGKYMFFTRVDYIDGDYEKASDGESKLN 252

Query: 373 IGVMKKDGSQERLLVEDSN------LQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDL-N 424
           I    K G + R +   S       +  P+ +  G+++ F+ +   G  G+ +Y   L N
Sbjct: 253 IYRAVKAGGEWRDVRTTSLESQEYGVGHPSITADGKAIFFASEAPGGQGGTDIYKASLKN 312

Query: 425 GRNETL------INTPAYASDPQWVG 444
           G+          +NT    S P W+ 
Sbjct: 313 GKISNPVNLGPTVNTAGDDSFP-WIA 337


>gi|332373966|gb|AEE62124.1| unknown [Dendroctonus ponderosae]
          Length = 316

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 76/207 (36%), Gaps = 19/207 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +SG +  +L + D    N + L      +   P  + + + + +A   + + +++
Sbjct: 120 VEDTFLSGSMDKTLRLWDLRSPNCQGLMH----LSGRPVAAYDPEGLIFAAGVNSECIKL 175

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
           Y +   D       K            +FS +GK  LIS        I  +D       +
Sbjct: 176 YDLRSFDKGPFVTFKLAQEKECDWTGLKFSRDGKTILISTN---GSIIRLIDAFHGTPLQ 232

Query: 296 RLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             T   N   I I AS+SPD SQ +F    +G+  ++   + G     ++ D        
Sbjct: 233 TFTGHLNNKGIPIEASFSPD-SQFIFSGSTDGRVHVWNADT-GYKVCVLNADHPGPVQCV 290

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            ++P    +     +    A  +   D
Sbjct: 291 QFNP--KYMMLAS-ACTNMAFWIPSAD 314


>gi|301112519|ref|XP_002998030.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112324|gb|EEY70376.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 612

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 72/241 (29%), Gaps = 34/241 (14%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V + D     ++    ++     +FSPN   VA  + D    +RV+  D         I 
Sbjct: 53  VRNFDDPTDTFVYKGHNEPTTVAKFSPNGYWVA--SGDVSGKVRVWSYDNPEHTLKLEIP 110

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-------NATERLTNTLFINISA 307
            F   I    +  + KR +        M    +              +R+ +  +     
Sbjct: 111 VFAGEIKDLSWDPDSKRIVAVGDGRGLMARVFMWDTGNSIGEIVGHQKRILSVDYRQTRP 170

Query: 308 ----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               + S D +  V+    EG    +   +N                   +SP G+   F
Sbjct: 171 FRIMTASEDFNVCVY----EGPPFKFKQNNN--------NLHSNFVNCVRFSPNGE---F 215

Query: 364 TKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               G    I +      +          +++ +  WSP G  L+ S     D    L+ 
Sbjct: 216 AVSVGSDKLICLYDGKSGELVDKFPAAHQASIYSVCWSPDGTQLLTSS---ADKTVLLWD 272

Query: 421 I 421
           +
Sbjct: 273 V 273



 Score = 40.0 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 9/126 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP++  VA  + +D  I    ++D         I      +    FS +G        
Sbjct: 456 AISPSEDLVAVGSQEDMKIHLFDVVDGSSLVESGEITGHLGALTCVSFSPDGALLA---A 512

Query: 278 KDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            D   ++   D+ S + +             S +++P      F +     E++Y+   N
Sbjct: 513 GDTYREVRVWDVASRSAKVQGMWVYHSTRVTSVAWAPSGD---FIASGSLDERIYIWDVN 569

Query: 335 GSDQKR 340
              +KR
Sbjct: 570 SPMKKR 575


>gi|21241422|ref|NP_641004.1| surface antigen gene [Xanthomonas axonopodis pv. citri str. 306]
 gi|21106758|gb|AAM35540.1| surface antigen gene [Xanthomonas axonopodis pv. citri str. 306]
          Length = 348

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 66/199 (33%), Gaps = 15/199 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +++A        ++ +      + +     G          ++ +GK  L    
Sbjct: 134 ALSPDGKQLAVCVEGQNQVMLIDAAQLTVQQVIATRGQAPEHC---AYTPDGKWLL--TS 188

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            + + D+  +++ ++ +  +  T       +++PD     + +       + V+    + 
Sbjct: 189 NEGSNDMDMIEVATHRSRGVVATSGHPRGMAFAPDGHS-AYVAQET-ANVVDVIDLQ-TR 245

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQA 394
           Q+R S            S  G  +     +G    + V+  +    R L E         
Sbjct: 246 QRRASLPAGVRTAGVALSADGTRLY--ASNGGAGTVSVIDLNT--ARALAEIPVGQRPWN 301

Query: 395 PTWSPSGRSLIFSRKKDGD 413
           P  +P+G  L  +  +   
Sbjct: 302 PALTPAGDKLYVANGRSNS 320



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 50/130 (38%), Gaps = 10/130 (7%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD  Q+      EG+ Q+ ++ +     +++   +  +     ++P G  +  +     
Sbjct: 136 SPDGKQLAVCV--EGQNQVMLIDAAQLTVQQVIATRGQAPEHCAYTPDGKWLLTSNEGSN 193

Query: 370 KFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                +++    + R ++    + +   ++P G     S     +T + +  IDL  R +
Sbjct: 194 DMD--MIEVATHRSRGVVATSGHPRGMAFAPDGH----SAYVAQETANVVDVIDLQTR-Q 246

Query: 429 TLINTPAYAS 438
              + PA   
Sbjct: 247 RRASLPAGVR 256



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 50/157 (31%), Gaps = 10/157 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDR 322
             S +GK+  + V+      +  +D      +++  T        +Y+PD   ++  S+ 
Sbjct: 134 ALSPDGKQLAVCVE--GQNQVMLIDAAQLTVQQVIATRGQAPEHCAYTPDGKWLL-TSNE 190

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              +   +  +    +  ++           ++P G   A+         + V+     Q
Sbjct: 191 GSNDMDMIEVATHRSRGVVATSGHP--RGMAFAPDGHS-AYVAQETAN-VVDVIDLQTRQ 246

Query: 383 ERL-LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            R  L           S  G  L ++      T S +
Sbjct: 247 RRASLPAGVRTAGVALSADGTRL-YASNGGAGTVSVI 282



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 78/199 (39%), Gaps = 15/199 (7%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +N + ++D     ++ +  +R Q      ++P+ + +  +     D+  + +   R   
Sbjct: 148 GQNQVMLIDAAQLTVQQVIATRGQAPEHCAYTPDGKWLLTSNEGSNDMDMIEVATHRSRG 207

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
                G+ R M     F+ +G  A ++  ++ A  +  +DLQ+    R +    +  +  
Sbjct: 208 VVATSGHPRGM----AFAPDGHSAYVA--QETANVVDVIDLQTRQ-RRASLPAGVRTAGV 260

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + S D +++ + S+  G   + V+  N +         +  + +P  +P GD +      
Sbjct: 261 ALSADGTRL-YASN-GGAGTVSVIDLNTARALAEIPVGQRPW-NPALTPAGDKLYVANGR 317

Query: 368 GEKFAIGVMKKDGSQERLL 386
               ++     D +  R L
Sbjct: 318 SNSVSV----IDTASLREL 332


>gi|88807221|ref|ZP_01122733.1| hypothetical protein WH7805_11758 [Synechococcus sp. WH 7805]
 gi|88788435|gb|EAR19590.1| hypothetical protein WH7805_11758 [Synechococcus sp. WH 7805]
          Length = 163

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 49/114 (42%), Gaps = 4/114 (3%)

Query: 269 GKRALISV-QKDEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREG 324
           G+R L+S+  ++    I  VDL+S     L          +S S S +  +I F   REG
Sbjct: 49  GQRWLVSIASRNGRERIELVDLRSRQPVPLPGLNQAGSQPVSVSVSGNGKRIAFVRTREG 108

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           + +L + + + +  +R+  +      +     +G  +A       ++ + V++ 
Sbjct: 109 RTELMLYRRDAAGLQRLPIEPSGVPREVSLDGEGRRLAVQVSRQGRWDVDVIRL 162



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 29/84 (34%), Gaps = 5/84 (5%)

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             +        +  I ++     Q   L       S   + + S +G+ + F R ++G T
Sbjct: 51  RWLVSIASRNGRERIELVDLRSRQPVPLPGLNQAGSQPVSVSVSGNGKRIAFVRTREGRT 110

Query: 415 GSKLYSIDLNGRNETLINTPAYAS 438
              LY  D  G  + L   P+   
Sbjct: 111 ELMLYRRDAAGL-QRLPIEPSGVP 133



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 4/146 (2%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPN-QQKVAYATYDDEDILRVYLMDTRIDRAP 250
           S+    R G   +    S  Q   + R  P   Q+   +        R+ L+D R  +  
Sbjct: 17  SISGCSRSGLRPQPGLNSSLQRSADSRRQPALGQRWLVSIASRNGRERIELVDLRSRQPV 76

Query: 251 KRIG--NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISA 307
              G     S  ++   S NGKR      ++   ++      +   +RL      +    
Sbjct: 77  PLPGLNQAGSQPVSVSVSGNGKRIAFVRTREGRTELMLYRRDAAGLQRLPIEPSGVPREV 136

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQS 333
           S   +  ++  +  R+G+  + V++ 
Sbjct: 137 SLDGEGRRLAVQVSRQGRWDVDVIRL 162


>gi|312113819|ref|YP_004011415.1| oligopeptidase B [Rhodomicrobium vannielii ATCC 17100]
 gi|311218948|gb|ADP70316.1| Oligopeptidase B [Rhodomicrobium vannielii ATCC 17100]
          Length = 701

 Score = 47.7 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 78/229 (34%), Gaps = 26/229 (11%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--------LAPRFSSNGKR 271
           +P+     +  +        ++ + R   AP  + +  ++          A  +S + K+
Sbjct: 97  APDGPFAYFTDFVVGGQHPRFIREPRGGGAPHVLLDGDALAKDKPYFSLGAIDWSPDHKK 156

Query: 272 ALISVQKDEA--MDIYSVDLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDREGKEQ 327
              +     +        DL++      T     +    A++ PD+S   +    E +  
Sbjct: 157 LAYAYDDKGSEFYAFRVRDLETGED---TADFVPDSEGGAAWLPDASAFYYIRVDEHRRP 213

Query: 328 LYVMQ----SNGSDQKRISQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIGVMKKDG-- 380
           L VM+    +  S+ + + ++K+  +F  V  S     I  +    E   +  +      
Sbjct: 214 LQVMRHRLGTPASEDELVYREKDQGFFTRVGESLDKRFIFISAGDHETAEVHFLDLAAPE 273

Query: 381 SQERLLVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKLY--SIDLNGR 426
              R++         +     GR +I     DG    K+   S+D  GR
Sbjct: 274 QGLRVVTPREVNHDYSVDHHEGRFII-LTNADGAEDYKIMQTSVDAPGR 321


>gi|327478818|gb|AEA82128.1| 3-carboxymuconate cyclase [Pseudomonas stutzeri DSM 4166]
          Length = 387

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 91/288 (31%), Gaps = 35/288 (12%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM--D 197
           +G     +   ++ I   IS  +    T      + R LFVS          SL V+  D
Sbjct: 96  VGAWQRDAKGDYQPIGQAIS--LGDEPTHASLSADGRYLFVSNYGSRPNPGGSLAVLPLD 153

Query: 198 RDGAN-------IRYLTPSRDQILFEPRF-----SPNQQKVAYATYDDEDILRVYLMDTR 245
            DG             +    +    P       SP+  ++  +    + +  VY  D  
Sbjct: 154 EDGRPLPVTQIAAHQASGVHPERQASPHVHSAVPSPDGTRLLVSDLGADRVF-VYRYDPS 212

Query: 246 IDRAPKRIGNFRSMIL----APR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
               P R     S+ L     PR   F  NGK A ++++    +  +     +    +L 
Sbjct: 213 HAERPLRPDEPASIELPAGSGPRHLVFHPNGKHAYLALELSAQVAGFDYTNGTLTRRQLL 272

Query: 299 NTLFINISASYSP-------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           +    +    +SP       D  + ++ SDR     + V         R  Q + +   +
Sbjct: 273 DLKESDSEVRHSPGAIHTSADG-RFLYVSDRGDYNHIIVFAIEADGTLREIQRRPSEGRE 331

Query: 352 P---VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           P     +P G  +       +   +     +  +    ++   +  P+
Sbjct: 332 PREFAITPDGRFMLIANQLSDALVVIRRDPESGKLGETLQTLAVGRPS 379



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 73/219 (33%), Gaps = 44/219 (20%)

Query: 261 LAPRFSSNGKRALISV-----QKDEAMDIYSVDLQSNAT--ERLTNTLFINISAS----- 308
                S++G+   +S          ++ +  +D         ++       +        
Sbjct: 121 THASLSADGRYLFVSNYGSRPNPGGSLAVLPLDEDGRPLPVTQIAAHQASGVHPERQASP 180

Query: 309 ------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWS------ 355
                  SPD ++++  SD  G ++++V + + S  +R +  D+ AS   P  S      
Sbjct: 181 HVHSAVPSPDGTRLL-VSD-LGADRVFVYRYDPSHAERPLRPDEPASIELPAGSGPRHLV 238

Query: 356 --PQGD--LIA---------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
             P G    +A         F   +G      ++    S   +      +     S  GR
Sbjct: 239 FHPNGKHAYLALELSAQVAGFDYTNGTLTRRQLLDLKESDSEVRHSPGAIHT---SADGR 295

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            L +   +       +++I+ +G    +   P+   +P+
Sbjct: 296 FL-YVSDRGDYNHIIVFAIEADGTLREIQRRPSEGREPR 333



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 61/209 (29%), Gaps = 22/209 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLM--DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           P          +D   L V  +         P+R  +       P  S +G R L+S   
Sbjct: 143 PGGSLAVLPLDEDGRPLPVTQIAAHQASGVHPERQASPHVHSAVP--SPDGTRLLVSDLG 200

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISAS--------YSPDSSQIVFESDREGKEQLYV 330
            + + +Y  D          +        +        + P+        +   +   + 
Sbjct: 201 ADRVFVYRYDPSHAERPLRPDEPASIELPAGSGPRHLVFHPNGKHAYLALELSAQVAGFD 260

Query: 331 MQSNGSDQKRISQDKE------ASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGS-- 381
             +    ++++   KE       S      S  G  +  +        I   ++ DG+  
Sbjct: 261 YTNGTLTRRQLLDLKESDSEVRHSPGAIHTSADGRFLYVSDRGDYNHIIVFAIEADGTLR 320

Query: 382 -QERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             +R   E    +    +P GR ++ + +
Sbjct: 321 EIQRRPSEGREPREFAITPDGRFMLIANQ 349


>gi|326911741|ref|XP_003202214.1| PREDICTED: apoptotic protease-activating factor 1-like [Meleagris
            gallopavo]
          Length = 1249

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 20/174 (11%)

Query: 273  LISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L+S   D  + ++  ++ +  TE+         +S + SPD S+    S     +   + 
Sbjct: 1059 LLSWSFDGTVKVW--NITTGITEKDFACHRGAVLSCAVSPDGSRF---SSTSADKTAKIW 1113

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---------GSQ 382
                S      +  EA      +SP   L+A T        I  +               
Sbjct: 1114 SFESSSALHELKGHEACVRCSAFSPNNKLLA-TGDDKGDIRIWDVLTGELLHFCSSVTVD 1172

Query: 383  ERLLVEDSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRNETLIN 432
            E        +   ++SP  + L+    + +  D  TG  L +   NG N   I+
Sbjct: 1173 EGEPTHGGWVTDLSFSPDSKMLVSSGGYLKWWDVTTGESLQTFYTNGTNLKSIH 1226



 Score = 43.1 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 62/195 (31%), Gaps = 37/195 (18%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +S +                V + +       K     R  +L+   S +G R   S  
Sbjct: 1061 SWSFDGT--------------VKVWNITTGITEKDFACHRGAVLSCAVSPDGSR-FSSTS 1105

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY-------- 329
             D+   I+S +  S+A   L         +++SP++  +    D +G  +++        
Sbjct: 1106 ADKTAKIWSFE-SSSALHELKGHEACVRCSAFSPNNKLLA-TGDDKGDIRIWDVLTGELL 1163

Query: 330  ----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                 +  +  +             D  +SP   ++     SG       +    S +  
Sbjct: 1164 HFCSSVTVDEGEPT-----HGGWVTDLSFSPDSKMLV---SSGGYLKWWDVTTGESLQTF 1215

Query: 386  LVEDSNLQAPTWSPS 400
                +NL++   SP+
Sbjct: 1216 YTNGTNLKSIHVSPN 1230


>gi|310790548|gb|EFQ26081.1| WD domain-containing protein [Glomerella graminicola M1.001]
          Length = 790

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 59/163 (36%), Gaps = 4/163 (2%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    +  +  +D A+ + +    D  +    + PN   V  A+ + +  +R  +    
Sbjct: 550 TGGWDKTARIWMQDHASAQRILVGHDSSISAVAWHPNGTYVFSASDETDKSIR--MWSVI 607

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  +        I A   + NG R L +      +  + +   +       +      
Sbjct: 608 TGQCVRVFTGHTDYISAIECAPNG-RILATADNSGNIFFWDIQKGARIKRSRGHGKGGIW 666

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           S S+S +S+ +V    ++G  +++ +       K + Q +  +
Sbjct: 667 SLSFSVESNVLV-SGGQDGTVRVWDVDLPAEGHKVVQQQQGTA 708



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 65/194 (33%), Gaps = 6/194 (3%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V +    I             ++   +  +G    ++   D+   I+  D  S     + 
Sbjct: 515 VRIWSLDIWACVCVYKGHDGPVMRAEWGPHGHY-FLTGGWDKTARIWMQDHASAQRILVG 573

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +   I+  A + P+ +  VF +  E  + + +         R+             +P G
Sbjct: 574 HDSSISAVA-WHPNGTY-VFSASDETDKSIRMWSVITGQCVRVFTGHTDYISAIECAPNG 631

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            ++A    SG  F   + K    +         + + ++S     L+ S  +DG    ++
Sbjct: 632 RILATADNSGNIFFWDIQKGARIKRSRGHGKGGIWSLSFSVESNVLV-SGGQDGTV--RV 688

Query: 419 YSIDLNGRNETLIN 432
           + +DL      ++ 
Sbjct: 689 WDVDLPAEGHKVVQ 702


>gi|302762400|ref|XP_002964622.1| hypothetical protein SELMODRAFT_80929 [Selaginella moellendorffii]
 gi|300168351|gb|EFJ34955.1| hypothetical protein SELMODRAFT_80929 [Selaginella moellendorffii]
          Length = 887

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 64/191 (33%), Gaps = 8/191 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ Q +A    D++    V L +              + + A  F + G  A++S  
Sbjct: 373 AYSPDSQLIATGADDNK----VKLWNAASGFCFVTFAEHTNAVTAVLFLA-GSNAVLSAS 427

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  +  + + ++       T T       S + D S  +  +      Q+YV     + 
Sbjct: 428 LDGTVRAWDL-MRYRNFRTFT-TPAPTQFVSLAADQSGEIICAGTLDTFQIYVWSMKTAR 485

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              +    E       +SP  + +A + +        V +  G  E       ++    +
Sbjct: 486 LVDVLSGHEGPVHGLAFSPTDEFLASSSWDKTVRLWDVFEGKGGVET-FTHTHDVLTVVY 544

Query: 398 SPSGRSLIFSR 408
            P G+ L  S 
Sbjct: 545 RPDGKQLACST 555



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 64/195 (32%), Gaps = 27/195 (13%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + + R              +     S NG    + +  D +     V L        
Sbjct: 35  RISVTELRKSECWTLPVENGGDVSRVAVSPNG---ALLLSIDASGRCILVSLARRILLHR 91

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV---- 353
            +      +  +SPD S       R     L V ++ G  ++ ++     ++        
Sbjct: 92  MSFKAPVTALGFSPDGSLFAVAMGR----LLQVWRTPGCRKEFMAFQLLHTFSSSHDTIT 147

Query: 354 ---WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              WSP G+ I       + FA+ +     ++  +L    N+       +G  + F+   
Sbjct: 148 CLGWSPDGNWII---CGCKDFAVRIFTLQSNRPVVLSAHRNVV------NG--VFFTEST 196

Query: 411 DGDTGSKLYSIDLNG 425
           +G  G+  YS   +G
Sbjct: 197 EGGIGA--YSFSKDG 209


>gi|238879572|gb|EEQ43210.1| periodic tryptophan protein 2 [Candida albicans WO-1]
          Length = 922

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 63/174 (36%), Gaps = 13/174 (7%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A+ +     +L VY   +      K+ G+F SM     +S +G R + +   D  +
Sbjct: 308 GEWLAFGSAKLGQLL-VYEWQSE-SYILKQQGHFDSMNTL-CYSPDGSRLV-TGSDDGKI 363

Query: 283 DIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            I+  D++S       T          ++    Q++F S  +G  + + +     + K  
Sbjct: 364 KIW--DVRSGFCLMTFTEHTSAVTQVQFAKRG-QVLFSSSLDGTIRAWDL-IRFRNFKTF 419

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +      +      P G++I         F I V        +LL   +  + P
Sbjct: 420 TATSRVQFNCLAVDPSGEVIVGGSQD--TFEIYVWSVQTG--QLLDSLTGHEGP 469


>gi|198429507|ref|XP_002131694.1| PREDICTED: similar to WD repeat domain 8 [Ciona intestinalis]
          Length = 449

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 57/167 (34%), Gaps = 9/167 (5%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F+      RFS +G           +  +    + +    RL   +    S  +S DS  
Sbjct: 7   FKQTQSLVRFSPDGNYLA----NCVSYKVIIRAVDTLQILRLYTCMDAVQSLEWSSDSQF 62

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG- 374
           ++    + G  Q++ ++      K    +  A      WSP G  +  T     +  +  
Sbjct: 63  LLCAMYKRGLVQIWSVEQPDWTCK--IDEGSAGLIHAQWSPDGRHVLTTASFNLRITVWS 120

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           ++ K  S  R +    +    ++S SG+ L     +       ++ +
Sbjct: 121 LVNKSISYIRFIKNSKDCL--SFSASGKYLAVGECRKCKDYISIFDV 165



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 69/200 (34%), Gaps = 17/200 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + Q +         +++++ ++        +I    + ++  ++S +G+  L +   
Sbjct: 56  WSSDSQFLL-CAMYKRGLVQIWSVEQPDWTC--KIDEGSAGLIHAQWSPDGRHVLTTASF 112

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +  + ++S+  +S +  R        +S  +S     +     R+ K+ + +        
Sbjct: 113 NLRITVWSLVNKSISYIRFIKNSKDCLS--FSASGKYLAVGECRKCKDYISIFDVESWQL 170

Query: 339 KRISQDKEASYFDPVWSPQGDLI-AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--- 394
            ++ +          WSP   +I A+       + I +   DG   R L           
Sbjct: 171 LKLFETDTEDLSGIKWSPDSRVICAWEHCL--WYKILIYTMDG---RCLSTFKAYDWALG 225

Query: 395 ---PTWSPSGRSLIFSRKKD 411
                WSP+ + L       
Sbjct: 226 VKRVEWSPASQFLAVGSYDQ 245



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 69/189 (36%), Gaps = 12/189 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           RFSP+   +A          +V +      +  +      ++     +SS+ +  L ++ 
Sbjct: 15  RFSPDGNYLANCV-----SYKVIIRAVDTLQILRLYTCMDAVQSL-EWSSDSQFLLCAMY 68

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           K   + I+SV+ Q + T ++       I A +SPD   ++  +      ++ V       
Sbjct: 69  KRGLVQIWSVE-QPDWTCKIDEGSAGLIHAQWSPDGRHVLTTASF--NLRITVWSLVNKS 125

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAP 395
              I   K  S     +S  G  +A  +    K  I +   +  Q   L   +  +L   
Sbjct: 126 ISYIRFIKN-SKDCLSFSASGKYLAVGECRKCKDYISIFDVESWQLLKLFETDTEDLSGI 184

Query: 396 TWSPSGRSL 404
            WSP  R +
Sbjct: 185 KWSPDSRVI 193



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 64/165 (38%), Gaps = 13/165 (7%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                 L   ++SP+ + V   T      + V+ +  +     + I N +  +    FS+
Sbjct: 88  DEGSAGLIHAQWSPDGRHVL-TTASFNLRITVWSLVNKSISYIRFIKNSKDCL---SFSA 143

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKE 326
           +GK   +   +     I   D++S    +L  T   ++S   +SPD S+++   +     
Sbjct: 144 SGKYLAVGECRKCKDYISIFDVESWQLLKLFETDTEDLSGIKWSPD-SRVICAWEHCLWY 202

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFS 367
           ++ +   +G   + +S  K   +   V    WSP    +A   + 
Sbjct: 203 KILIYTMDG---RCLSTFKAYDWALGVKRVEWSPASQFLAVGSYD 244



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 48/126 (38%), Gaps = 11/126 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A      +  L ++ M +       +  +    I   R++    R   S  
Sbjct: 333 AFSPDNRYLATMDDSMKSALHIWTMKSLSLYVVIQQVDP---IKCARWNPCTCRLAFS-- 387

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                 +Y        + ++  +   ++ S  + PD   +V  S    KEQ+ V     S
Sbjct: 388 -CGNNKVYLWSPSGAVSVQVPLSPLFHVHSLRWHPDGKSLVLAS----KEQMCVCYLQSS 442

Query: 337 DQKRIS 342
           ++++++
Sbjct: 443 EKEKLT 448



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 45/126 (35%), Gaps = 10/126 (7%)

Query: 264 RFSSNGKRAL-ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
            FS + +    +      A+ I+++  +S +   +   +     A ++P + ++ F    
Sbjct: 333 AFSPDNRYLATMDDSMKSALHIWTM--KSLSLYVVIQQVDPIKCARWNPCTCRLAFS--- 387

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G  ++Y+   +G+   ++            W P G  +           + V     S+
Sbjct: 388 CGNNKVYLWSPSGAVSVQVPLSPLFHVHSLRWHPDGKSLVLASKE----QMCVCYLQSSE 443

Query: 383 ERLLVE 388
           +  L +
Sbjct: 444 KEKLTD 449


>gi|220910613|ref|YP_002485923.1| WD-40 repeat protein [Cyanothece sp. PCC 7425]
 gi|219867385|gb|ACL47722.1| WD-40 repeat protein [Cyanothece sp. PCC 7425]
          Length = 393

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/309 (15%), Positives = 107/309 (34%), Gaps = 30/309 (9%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ-SITGEKGDFNSRILFVSESVV 185
           E R+WD+   K++       S    +K+A      I   +IT ++  F +    +     
Sbjct: 66  EIRVWDIVSGKKLYDSTTVGST--VKKMAGLSPATISTLNITPDQRLFITAASSLGGIGT 123

Query: 186 SGIIKNSLCVMDRDGAN---IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            G  +  +     D  N   +R L   RD++ F    SP+   +       +D   + + 
Sbjct: 124 QGQHEIQIW----DLVNRQLLRTLKGHRDRVRFL-AVSPDSHTLV----SQDDSGVIQVW 174

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +    +  + +   R        S +GK    S+ K   +  +++     A  +L     
Sbjct: 175 NLATGQVRQTLNTERRQRFPIVLSPDGK-VFASMNKQGTVTFWNI-TTGQAVGKLQADPS 232

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +   + S ++  ++ ++   G  + +   + G +  R+        F     P+G+ + 
Sbjct: 233 -HTPLAISDNNQTLLIQN--AGDVKQFRDIATGRELTRL--KGSYIEFPFTVDPRGEQVL 287

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSI 421
               +     + +       E      +N   P + +P G+S +     D      L++I
Sbjct: 288 IQTNTD----LKLYNLLTGVELKTFNMNNFYNPISITPDGQSFL---TIDSQDNYVLWNI 340

Query: 422 DLNGRNETL 430
               +   L
Sbjct: 341 ATGAKIHQL 349


>gi|162148076|ref|YP_001602537.1| hypothetical protein GDI_2293 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161786653|emb|CAP56236.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 381

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 85/276 (30%), Gaps = 36/276 (13%)

Query: 192 SLCVMDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            + V+D  G   R +   +        R +P+ QK          ++  +  D R     
Sbjct: 109 RISVIDLSGDRPRVVQQVTSAPGATTLRITPD-QKHVLVANGAGGVVTWFRFDGRRLSDR 167

Query: 251 KRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
             I         P     + +G+RAL+S+ K +   ++ + L  +      + L I    
Sbjct: 168 TVIT-LPGAAGFPGGLAITPDGRRALVSLWKGDR--VFVLHLDGDRVTVDPHPLEIGPGP 224

Query: 308 ---SYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
                + D    V      G      L V+    +  + I +    +  +    S  G  
Sbjct: 225 WNIRLTGDGHYAVMGILGHGEGLPGALSVLDLTAAPIREIQRVVVPNAPEGLDISSDGRF 284

Query: 361 IAFTKFSG-----------EKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIF 406
           +A    +G           ++  + V    G     L +      P    ++P G S++ 
Sbjct: 285 VAVVSQNGSAVVPTSPHYHDRGIVTVFSLSGGHLTQLAQAPGTLWPQGLVFAPDGTSIL- 343

Query: 407 SRKKDGDTGSKLYSIDLNGRNETL---INTPAYASD 439
                G     L ++  +G    +      P   +D
Sbjct: 344 ---VQGVMDRMLRTLSWDGTTLAVKGDTPLPGGGAD 376


>gi|118082532|ref|XP_001232225.1| PREDICTED: similar to apoptotic protease activating factor-1 long
            isoform APAF-1L isoform 1 [Gallus gallus]
          Length = 1232

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 20/174 (11%)

Query: 273  LISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L+S   D  + ++  ++ +  TE+         +S + SPD S+    S     +   + 
Sbjct: 1042 LLSWSFDGTVKVW--NITTGKTEKDFACHRGAVLSCAVSPDGSRF---SSTSADKTAKIW 1096

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---------GSQ 382
                S      +  EA      +SP   L+A T        I  +               
Sbjct: 1097 SFESSSVLHELKGHEACVRCSAFSPSNKLLA-TGDDKGDIRIWDILTGELLHFCSSVTVD 1155

Query: 383  ERLLVEDSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRNETLIN 432
            E        +   ++SP  + L+    + +  D  TG  L +   NG N   I+
Sbjct: 1156 EEEPTHGGWVTDLSFSPDSKMLVSSGGYLKWWDVTTGESLQTFYTNGTNLKSIH 1209



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 31/192 (16%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +S +                V + +    +  K     R  +L+   S +G R   S  
Sbjct: 1044 SWSFDGT--------------VKVWNITTGKTEKDFACHRGAVLSCAVSPDGSR-FSSTS 1088

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D+   I+S +  S+    L         +++SP +  +    D +G   + +      +
Sbjct: 1089 ADKTAKIWSFE-SSSVLHELKGHEACVRCSAFSPSNKLLA-TGDDKG--DIRIWDILTGE 1144

Query: 338  Q----KRISQDKE-----ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                   ++ D+E         D  +SP   ++     SG       +    S +     
Sbjct: 1145 LLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLV---SSGGYLKWWDVTTGESLQTFYTN 1201

Query: 389  DSNLQAPTWSPS 400
             +NL++   SP+
Sbjct: 1202 GTNLKSIHVSPN 1213


>gi|118082534|ref|XP_001232245.1| PREDICTED: similar to apoptotic protease activating factor-1 long
            isoform APAF-1L isoform 2 [Gallus gallus]
          Length = 1200

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 20/174 (11%)

Query: 273  LISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L+S   D  + ++  ++ +  TE+         +S + SPD S+    S     +   + 
Sbjct: 1010 LLSWSFDGTVKVW--NITTGKTEKDFACHRGAVLSCAVSPDGSRF---SSTSADKTAKIW 1064

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---------GSQ 382
                S      +  EA      +SP   L+A T        I  +               
Sbjct: 1065 SFESSSVLHELKGHEACVRCSAFSPSNKLLA-TGDDKGDIRIWDILTGELLHFCSSVTVD 1123

Query: 383  ERLLVEDSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRNETLIN 432
            E        +   ++SP  + L+    + +  D  TG  L +   NG N   I+
Sbjct: 1124 EEEPTHGGWVTDLSFSPDSKMLVSSGGYLKWWDVTTGESLQTFYTNGTNLKSIH 1177



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 31/192 (16%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +S +                V + +    +  K     R  +L+   S +G R   S  
Sbjct: 1012 SWSFDGT--------------VKVWNITTGKTEKDFACHRGAVLSCAVSPDGSR-FSSTS 1056

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D+   I+S +  S+    L         +++SP +  +    D +G   + +      +
Sbjct: 1057 ADKTAKIWSFE-SSSVLHELKGHEACVRCSAFSPSNKLLA-TGDDKG--DIRIWDILTGE 1112

Query: 338  Q----KRISQDKE-----ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                   ++ D+E         D  +SP   ++     SG       +    S +     
Sbjct: 1113 LLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLV---SSGGYLKWWDVTTGESLQTFYTN 1169

Query: 389  DSNLQAPTWSPS 400
             +NL++   SP+
Sbjct: 1170 GTNLKSIHVSPN 1181


>gi|118082536|ref|XP_001232266.1| PREDICTED: similar to apoptotic protease activating factor-1 long
            isoform APAF-1L isoform 3 [Gallus gallus]
          Length = 1189

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 20/174 (11%)

Query: 273  LISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L+S   D  + ++  ++ +  TE+         +S + SPD S+    S     +   + 
Sbjct: 999  LLSWSFDGTVKVW--NITTGKTEKDFACHRGAVLSCAVSPDGSRF---SSTSADKTAKIW 1053

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---------GSQ 382
                S      +  EA      +SP   L+A T        I  +               
Sbjct: 1054 SFESSSVLHELKGHEACVRCSAFSPSNKLLA-TGDDKGDIRIWDILTGELLHFCSSVTVD 1112

Query: 383  ERLLVEDSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRNETLIN 432
            E        +   ++SP  + L+    + +  D  TG  L +   NG N   I+
Sbjct: 1113 EEEPTHGGWVTDLSFSPDSKMLVSSGGYLKWWDVTTGESLQTFYTNGTNLKSIH 1166



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 31/192 (16%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +S +                V + +    +  K     R  +L+   S +G R   S  
Sbjct: 1001 SWSFDGT--------------VKVWNITTGKTEKDFACHRGAVLSCAVSPDGSR-FSSTS 1045

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D+   I+S +  S+    L         +++SP +  +    D +G   + +      +
Sbjct: 1046 ADKTAKIWSFE-SSSVLHELKGHEACVRCSAFSPSNKLLA-TGDDKG--DIRIWDILTGE 1101

Query: 338  Q----KRISQDKE-----ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                   ++ D+E         D  +SP   ++     SG       +    S +     
Sbjct: 1102 LLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLV---SSGGYLKWWDVTTGESLQTFYTN 1158

Query: 389  DSNLQAPTWSPS 400
             +NL++   SP+
Sbjct: 1159 GTNLKSIHVSPN 1170


>gi|118082530|ref|XP_416167.2| PREDICTED: similar to apoptotic protease activating factor-1 long
            isoform APAF-1L isoform 4 [Gallus gallus]
          Length = 1243

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 20/174 (11%)

Query: 273  LISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L+S   D  + ++  ++ +  TE+         +S + SPD S+    S     +   + 
Sbjct: 1053 LLSWSFDGTVKVW--NITTGKTEKDFACHRGAVLSCAVSPDGSRF---SSTSADKTAKIW 1107

Query: 332  QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---------GSQ 382
                S      +  EA      +SP   L+A T        I  +               
Sbjct: 1108 SFESSSVLHELKGHEACVRCSAFSPSNKLLA-TGDDKGDIRIWDILTGELLHFCSSVTVD 1166

Query: 383  ERLLVEDSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRNETLIN 432
            E        +   ++SP  + L+    + +  D  TG  L +   NG N   I+
Sbjct: 1167 EEEPTHGGWVTDLSFSPDSKMLVSSGGYLKWWDVTTGESLQTFYTNGTNLKSIH 1220



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 63/192 (32%), Gaps = 31/192 (16%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +S +                V + +    +  K     R  +L+   S +G R   S  
Sbjct: 1055 SWSFDGT--------------VKVWNITTGKTEKDFACHRGAVLSCAVSPDGSR-FSSTS 1099

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             D+   I+S +  S+    L         +++SP +  +    D +G   + +      +
Sbjct: 1100 ADKTAKIWSFE-SSSVLHELKGHEACVRCSAFSPSNKLLA-TGDDKG--DIRIWDILTGE 1155

Query: 338  Q----KRISQDKE-----ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                   ++ D+E         D  +SP   ++     SG       +    S +     
Sbjct: 1156 LLHFCSSVTVDEEEPTHGGWVTDLSFSPDSKMLV---SSGGYLKWWDVTTGESLQTFYTN 1212

Query: 389  DSNLQAPTWSPS 400
             +NL++   SP+
Sbjct: 1213 GTNLKSIHVSPN 1224


>gi|115686362|ref|XP_797867.2| PREDICTED: similar to Intraflagellar transport 80 homolog
           (Chlamydomonas) [Strongylocentrotus purpuratus]
 gi|115946100|ref|XP_001193975.1| PREDICTED: similar to Intraflagellar transport 80 homolog
           (Chlamydomonas) [Strongylocentrotus purpuratus]
          Length = 760

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 19/167 (11%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
           + + ++  R  K +   R  +L+ R+S +G     +  +D  + I+S   +S      L 
Sbjct: 88  FHLISKSGRVEKSVDAHRGAVLSGRWSYDGTAMA-TAGEDGQVKIWS---RSGMLRSTLA 143

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +T     S  +SPDS Q++  +     +QL +     + +    +  +       W+P  
Sbjct: 144 STGSAVYSICWSPDSDQVLITN----GKQLIIKSLQANAKPLQWKAHDGVILKVDWNPVN 199

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSG 401
           +LI      GE     V    G   R L        P     W+P G
Sbjct: 200 NLIL---SGGEDCKYRVWDSYG---RQLYSCHPHDYPIVSVAWAPDG 240



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 85/262 (32%), Gaps = 40/262 (15%)

Query: 157 TISDDIYQSITG--EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            + +DIY +      +G         S+  V         ++ + G   + +   R  +L
Sbjct: 50  KLPNDIYATDIHFFPRGLGGKAKQSQSDVFVLTSTDGKFHLISKSGRVEKSVDAHRGAVL 109

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
              R+S +   +A  T  ++  ++++   +R       + +  S + +  +S +  + LI
Sbjct: 110 SG-RWSYDGTAMA--TAGEDGQVKIW---SRSGMLRSTLASTGSAVYSICWSPDSDQVLI 163

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP----------DSSQIVFESDREG 324
           +  K   +     +       +      + +   ++P          D    V++S    
Sbjct: 164 TNGKQLIIKSLQANA---KPLQWKAHDGVILKVDWNPVNNLILSGGEDCKYRVWDSY--- 217

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             QLY                +       W+P G+L A   F+     + +  K G    
Sbjct: 218 GRQLYSC-----------HPHDYPIVSVAWAPDGELFAVGSFN----TLRLCDKSGWSYA 262

Query: 385 L-LVEDSNLQAPTWSPSGRSLI 405
           L      ++    WS  G  + 
Sbjct: 263 LEKPNTGSIFHIAWSGDGTQVA 284



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 19/141 (13%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
           + + KQ+I K   ++    +  AH   D +   +     D+N     V+  ++SG     
Sbjct: 163 ITNGKQLIIKSLQANAKPLQWKAH---DGVILKV-----DWNP----VNNLILSGGEDCK 210

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
             V D  G    Y     D  +    ++P+ +  A  +++   +         +++    
Sbjct: 211 YRVWDSYG-RQLYSCHPHDYPIVSVAWAPDGELFAVGSFNTLRLCDKSGWSYALEKPNT- 268

Query: 253 IGNFRSMILAPRFSSNGKRAL 273
                  I    +S +G +  
Sbjct: 269 -----GSIFHIAWSGDGTQVA 284


>gi|94497242|ref|ZP_01303814.1| oligogalacturonate lyase [Sphingomonas sp. SKA58]
 gi|94423347|gb|EAT08376.1| oligogalacturonate lyase [Sphingomonas sp. SKA58]
          Length = 433

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 85/270 (31%), Gaps = 49/270 (18%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS--------------- 220
           RI+ V +   +  +  +      DG  + YLTP   ++     +S               
Sbjct: 42  RIVRVDDRPGNYGLYFNYNPFTPDGRRMVYLTPEGIRVASVSDWSTKLVLKEKIDRLLFV 101

Query: 221 PNQQKVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            N++ VAY T +       +   +           KRI +     +    S N    L++
Sbjct: 102 GNREPVAYYTTNPTGRTENEGPSIVWSVNLDTGERKRIADLPGGRIE---SINANDTLLA 158

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYS---PDSSQIVFE---------SDRE 323
              +      ++  Q     R         S SYS   PD   + F              
Sbjct: 159 GHVELEPPPPAIAQQGRRDPR-------TGSPSYSGTGPDGRPLTFAQAKSQWMAARLAA 211

Query: 324 GKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDG 380
           G   +++ +     +++ +++ K+             L+ +       +   I  ++ DG
Sbjct: 212 GVPMEIFTIDIRTGERRSVTRSKDWLNHVQFSPKDPGLLMYCHEGPWEKVDRIWTIRTDG 271

Query: 381 SQ----ERLLVEDSNLQAPTWSPSGRSLIF 406
           S      +   +        W+P GR++ +
Sbjct: 272 SAKTKVHQRRFQGEIAGHEYWAPDGRTIWY 301



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 64/168 (38%), Gaps = 25/168 (14%)

Query: 192 SLCVMDRDGANIRYLTPSR--DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID-R 248
            +  +  DG+    +   R   +I     ++P+ + + Y     + +  +   D     R
Sbjct: 263 RIWTIRTDGSAKTKVHQRRFQGEIAGHEYWAPDGRTIWYDLIQPQGVQWLAGHDVVSGAR 322

Query: 249 APKRIGNFRSM---ILAP---RFSSNG----KRA-LISVQKDEAMDIY-SVD----LQSN 292
              RIG  +       +P    FS +G    K   L   + D++     ++D    + + 
Sbjct: 323 RWLRIGPGQGSYHYSSSPDGASFSGDGNDQGKYISLFHPRMDDSARARETLDGAALIATG 382

Query: 293 ATE--RLTNTLFINI--SAS--YSPDSSQIVFESDREGKEQLYVMQSN 334
           A E  RL +    +     +  ++PD   +V+ S+ EG   +Y ++  
Sbjct: 383 ALETERLADLSRHDYTLEPNQHFTPDGKWLVYRSNMEGSPAIYAVEVA 430



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 34/215 (15%), Positives = 69/215 (32%), Gaps = 33/215 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDD-EDILRVYLMDTRIDRA 249
            +  +D      R +T S+D +    +FSP +   + Y      E + R++ + T     
Sbjct: 216 EIFTIDIRTGERRSVTRSKDWLNHV-QFSPKDPGLLMYCHEGPWEKVDRIWTIRTDGSAK 274

Query: 250 PKRIGNFRSMILAPR--FSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            K         +A    ++ +G+     + Q      +   D+ S A   L         
Sbjct: 275 TKVHQRRFQGEIAGHEYWAPDGRTIWYDLIQPQGVQWLAGHDVVSGARRWLRIGPGQGSY 334

Query: 307 A-SYSPDSSQIVFESD---------------------REGKEQLYVMQSNGSDQKRISQD 344
             S SPD +   F  D                     RE  +   ++ +   + +R++  
Sbjct: 335 HYSSSPDGAS--FSGDGNDQGKYISLFHPRMDDSARARETLDGAALIATGALETERLADL 392

Query: 345 KEASYF---DPVWSPQGDLIAFTKFSGEKFAIGVM 376
               Y    +  ++P G  + +        AI  +
Sbjct: 393 SRHDYTLEPNQHFTPDGKWLVYRSNMEGSPAIYAV 427



 Score = 43.5 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 33/258 (12%), Positives = 82/258 (31%), Gaps = 46/258 (17%)

Query: 209 SRDQILFEPRFS---PNQQKVAYATYDDED---------ILRVYLMDTRIDRAPKRIGNF 256
            RD     P +S   P+ + + +A    +           + ++ +D R     + +   
Sbjct: 175 RRDPRTGSPSYSGTGPDGRPLTFAQAKSQWMAARLAAGVPMEIFTIDIRTGE-RRSVTRS 233

Query: 257 RSMILAPRFSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNTLF---INISASYS 310
           +  +   +FS      L+   +        I+++    +A  ++    F   I     ++
Sbjct: 234 KDWLNHVQFSPKDPGLLMYCHEGPWEKVDRIWTIRTDGSAKTKVHQRRFQGEIAGHEYWA 293

Query: 311 PDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           PD   I ++    +G + L         ++ +        +    SP G   +       
Sbjct: 294 PDGRTIWYDLIQPQGVQWLAGHDVVSGARRWLRIGPGQGSYHYSSSPDGASFSGDGNDQG 353

Query: 370 KF-AIGVMKKDGSQERLLVEDSNLQAPT-----------------------WSPSGRSLI 405
           K+ ++   + D S       D      T                       ++P G+ L+
Sbjct: 354 KYISLFHPRMDDSARARETLDGAALIATGALETERLADLSRHDYTLEPNQHFTPDGKWLV 413

Query: 406 FSRKKDGDTGSKLYSIDL 423
           +    +G     +Y++++
Sbjct: 414 YRSNMEGS--PAIYAVEV 429


>gi|68476051|ref|XP_717966.1| hypothetical protein CaO19.3276 [Candida albicans SC5314]
 gi|68476182|ref|XP_717900.1| hypothetical protein CaO19.10786 [Candida albicans SC5314]
 gi|46439635|gb|EAK98951.1| hypothetical protein CaO19.10786 [Candida albicans SC5314]
 gi|46439703|gb|EAK99018.1| hypothetical protein CaO19.3276 [Candida albicans SC5314]
          Length = 922

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 63/174 (36%), Gaps = 13/174 (7%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A+ +     +L VY   +      K+ G+F SM     +S +G R + +   D  +
Sbjct: 308 GEWLAFGSAKLGQLL-VYEWQSE-SYILKQQGHFDSMNTL-CYSPDGSRLV-TGSDDGKI 363

Query: 283 DIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            I+  D++S       T          ++    Q++F S  +G  + + +     + K  
Sbjct: 364 KIW--DVRSGFCLMTFTEHTSAVTQVQFAKRG-QVLFSSSLDGTIRAWDL-IRFRNFKTF 419

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +      +      P G++I         F I V        +LL   +  + P
Sbjct: 420 TATSRVQFNCLAVDPSGEVIVGGSQD--TFEIYVWSVQTG--QLLDSLTGHEGP 469


>gi|288800600|ref|ZP_06406058.1| CsgG family protein [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332813|gb|EFC71293.1| CsgG family protein [Prevotella sp. oral taxon 299 str. F0039]
          Length = 312

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 43/177 (24%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVS------IAFTKFVSI------ 58
           +N KI L +  + +G          V    N    +P        +A  +F +       
Sbjct: 1   MNKKILLAMAFLCLGTGAFAQRKVEVVEKVNVDTNAPAGKVIKRKVAIGRFSNETQYGKG 60

Query: 59  -------DELGGKVSEVVSKDLQRSDVFNLISQD---SFKQKITNPDSIPRFQDWNSLGA 108
                  D +G +  +++S  L  S  F L+ +    +  +++   +         ++GA
Sbjct: 61  LFYDKENDPMGKQALDILSAKLAASGKFLLLERGDLNALLEEVKKGEGSAN-----TIGA 115

Query: 109 QVLVTGRVIKEGKDRL----------------RVEFRLWDVKDRKQIIGKKFFSSPA 149
             L+ G + + G+  +                 V  RL DV     +   +   S  
Sbjct: 116 DYLIIGSITEFGRKNIGKQGVFTNTKTQTVDAAVAIRLVDVSTGLIVYSDEAKGSAE 172


>gi|294900277|ref|XP_002776949.1| receptor for activated C kinase 1, putative [Perkinsus marinus ATCC
           50983]
 gi|239884228|gb|EER08765.1| receptor for activated C kinase 1, putative [Perkinsus marinus ATCC
           50983]
          Length = 313

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 47/281 (16%), Positives = 90/281 (32%), Gaps = 50/281 (17%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
           AQ  ++G   K          RLWDV   K +  + F    +    +A   S D      
Sbjct: 76  AQYCLSGSWDKT--------LRLWDVSSGKTV--QTFVGHTSDVFSVA--FSPD------ 117

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS-RDQILFEPRFSPNQQKV 226
                        +  +VS     S+ + +  G     +        +   RFSP+ ++ 
Sbjct: 118 -------------NRQIVSAGRDKSIKIWNAMGECRHTIVDDQHTDWVSCVRFSPSAKQP 164

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
              +   + +++V+ +D    +    +     ++     S +G     S  KD    ++ 
Sbjct: 165 LIVSCGWDKLVKVWSLDN--GKLRINLAGHTGVLNNVTISPDGSLCA-SGGKDGVAMLWD 221

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDK 345
           V+ +      L     IN    +SP +  +   +D      + V      +  + I+   
Sbjct: 222 VN-EGKHLYSLDANSSINA-LCFSPKNYWLCAATD----GGVKVWDLETKNVLEEITPPA 275

Query: 346 EASYFDP-----VWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           E     P      WS  G+ +      G    I V +   S
Sbjct: 276 EYKSPLPWVVSISWSADGNTLFAGSTDG---NIYVYEIARS 313



 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 47/289 (16%), Positives = 96/289 (33%), Gaps = 26/289 (8%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +T     +    + VS S    I+   L          R      +Q + +   S + Q 
Sbjct: 19  VTSIATTYEDPKMVVSGSRDKKIMIWELTNDSESAGYPRRSLTGHNQAVSDVTLSSDAQY 78

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
               ++D      + L D    +  +      S + +  FS + ++ + S  +D+++ I+
Sbjct: 79  CLSGSWDK----TLRLWDVSSGKTVQTFVGHTSDVFSVAFSPDNRQIV-SAGRDKSIKIW 133

Query: 286 SVDLQSNATERLTNTLFINISA--SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
             +        + +    +  +   +SP + Q +  S     + + V   +    +    
Sbjct: 134 --NAMGECRHTIVDDQHTDWVSCVRFSPSAKQPLIVSC-GWDKLVKVWSLDNGKLRINLA 190

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                  +   SP G L A +        +  +  +G     L  +S++ A  +SP    
Sbjct: 191 GHTGVLNNVTISPDGSLCA-SGGKDGVAMLWDVN-EGKHLYSLDANSSINALCFSPKNYW 248

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYASDP-------QWVG 444
           L  +     D G K++  DL  +N    I  PA    P        W  
Sbjct: 249 LCAAT----DGGVKVW--DLETKNVLEEITPPAEYKSPLPWVVSISWSA 291


>gi|156397097|ref|XP_001637728.1| predicted protein [Nematostella vectensis]
 gi|156224843|gb|EDO45665.1| predicted protein [Nematostella vectensis]
          Length = 808

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 72/221 (32%), Gaps = 26/221 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+   +A       D  +V L +T             + + A  FS NG + ++S  
Sbjct: 345 AYSPDGNYIA----TGGDDGKVKLWNTMTGFCFVTFHEHSASVTAVTFSPNG-QVVLSAS 399

Query: 278 KDEAMDIYSVDL-------QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            D  +  + ++         S    +  +TL ++ S       S+  F        +++V
Sbjct: 400 LDGTVRAFDLNRYRNFRTFASPRPAQF-STLALDSSGEVVAAGSRDTF--------EIFV 450

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                     +    EA      +SP    +  +    +   +  + +       L   S
Sbjct: 451 WSIQTGRLLEVLAGHEAPVSSLAFSP-SHPVLISGAWDKTVRLWNVFESKVSRETLNLTS 509

Query: 391 NLQAPTWSPSGRSLIFSRKKDG----DTGSKLYSIDLNGRN 427
           ++ +    P GR +  S         D  + +    ++GR 
Sbjct: 510 DVVSIAVRPDGREVAISSLDGALTFWDLEAAVQVKSVDGRR 550



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 39/101 (38%), Gaps = 7/101 (6%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +P    + F     G+  ++  QS     K+  Q          +SP G+ IA     G+
Sbjct: 304 NPTGEWLAFGCTSLGQLLVWEWQSESYILKQ--QGHYYDMNVLAYSPDGNYIA---TGGD 358

Query: 370 KFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSR 408
              + +         +      +++ A T+SP+G+ ++ + 
Sbjct: 359 DGKVKLWNTMTGFCFVTFHEHSASVTAVTFSPNGQVVLSAS 399


>gi|194364405|ref|YP_002027015.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Stenotrophomonas maltophilia R551-3]
 gi|194347209|gb|ACF50332.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Stenotrophomonas maltophilia R551-3]
          Length = 840

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/191 (13%), Positives = 56/191 (29%), Gaps = 17/191 (8%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALI--SVQKDEAMD 283
            ++        +++LM+    +  +  G    + +A   +S + K            A +
Sbjct: 105 TFSDSRFSFGEKLWLMNVADGKERQISGLPAKLSIASVMWSPDQKWLAFNQVDAASGANE 164

Query: 284 IYSVDLQSNATERLTNTLF--INISASYSPDSSQ-IVFESDREGKEQLYVMQSNGSDQKR 340
           ++ VD+   +  RL   L   I     + PDS   +VF                     +
Sbjct: 165 LWLVDVAGGSARRLVAGLNTVIGSGYQWLPDSRGLVVFTRPANLGAAPAADGIPTGPAVQ 224

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV------MKKDGSQERLLVEDSNLQA 394
            +           +      +   +    +F          +  DGS   +      +  
Sbjct: 225 QTSQGGGVVSIRTY----QDLLKNEADARQFDYYATTQPMEVSLDGSTRAIGTAGIFMGF 280

Query: 395 PTWSPSGRSLI 405
              SP GR ++
Sbjct: 281 -AVSPDGRFVL 290



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 325 KEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGS 381
            E+L++M      +++IS    + S    +WSP    +AF +         + ++   G 
Sbjct: 114 GEKLWLMNVADGKERQISGLPAKLSIASVMWSPDQKWLAFNQVDAASGANELWLVDVAGG 173

Query: 382 QERLLVEDSNL---QAPTWSPSGR-SLIFSR 408
             R LV   N        W P  R  ++F+R
Sbjct: 174 SARRLVAGLNTVIGSGYQWLPDSRGLVVFTR 204



 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 28/63 (44%), Gaps = 3/63 (4%)

Query: 372 AIGVMKKDGSQERLLVEDS---NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
            + +M     +ER +       ++ +  WSP  + L F++       ++L+ +D+ G + 
Sbjct: 116 KLWLMNVADGKERQISGLPAKLSIASVMWSPDQKWLAFNQVDAASGANELWLVDVAGGSA 175

Query: 429 TLI 431
             +
Sbjct: 176 RRL 178


>gi|58427337|gb|AAW76374.1| peptidase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 809

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 9/106 (8%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
           D +QIV+ S+R+G E LY+      +  ++I++                 + FT      
Sbjct: 403 DGAQIVWASERDGWEHLYLYDGRSGEVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 462

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSR 408
                      +  DGS    L   +      +SP G+ +  ++SR
Sbjct: 463 GEDPYDRHAYRIGLDGSGLTALTPVAADHEVRYSPDGKWMLDLYSR 508



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 50/129 (38%), Gaps = 12/129 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA-SYSPDSSQIVFESD--RE 323
           +G + + + ++D    +Y  D +S     ++T   ++          + Q+ F +   + 
Sbjct: 403 DGAQIVWASERDGWEHLYLYDGRSGEVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 462

Query: 324 GKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMK 377
           G++      Y +  +GS    ++    A+  +  +SP G  +   +++            
Sbjct: 463 GEDPYDRHAYRIGLDGSGLTALTPV--AADHEVRYSPDGKWMLDLYSRVDLGPVLELRRS 520

Query: 378 KDGSQERLL 386
            DGS  R +
Sbjct: 521 ADGSLARTV 529


>gi|77360509|ref|YP_340084.1| enzymatic protein [Pseudoalteromonas haloplanktis TAC125]
 gi|76875420|emb|CAI86641.1| putative enzymatic protein [Pseudoalteromonas haloplanktis TAC125]
          Length = 834

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/159 (11%), Positives = 52/159 (32%), Gaps = 13/159 (8%)

Query: 253 IGNFRSMILAPR-FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI------ 305
           + +      +P  ++ +G    I ++  +  D +   +     + ++     +       
Sbjct: 373 LISDWGWDQSPIIWNDDGSNVAIMLEAWDNKDRWLATVDFKNNKLVSQHRLHDDAWIAYA 432

Query: 306 --SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                +  +S+ + + S++ G  QLY    NG      +   E S  +   +     I +
Sbjct: 433 FNDFGWLHNSNTLYYLSEQSGYSQLYKKPLNGKATALTTGKFEVS--NLTLTDDNSAIYY 490

Query: 364 TKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                    + I  +     +   + + + +   T SP 
Sbjct: 491 KANVEHPGLYEIYRVNPLTGKNEQVTDLNGMTDYTLSPD 529



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/148 (11%), Positives = 50/148 (33%), Gaps = 9/148 (6%)

Query: 297 LTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-------EAS 348
           L +    + S   ++ D S +    +    +  ++   +  + K +SQ +         +
Sbjct: 373 LISDWGWDQSPIIWNDDGSNVAIMLEAWDNKDRWLATVDFKNNKLVSQHRLHDDAWIAYA 432

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           + D  W    + + +         +     +G    L      +   T +    ++ +  
Sbjct: 433 FNDFGWLHNSNTLYYLSEQSGYSQLYKKPLNGKATALTTGKFEVSNLTLTDDNSAIYYKA 492

Query: 409 KKDGDTGSKLYSID-LNGRNETLINTPA 435
             +     ++Y ++ L G+NE + +   
Sbjct: 493 NVEHPGLYEIYRVNPLTGKNEQVTDLNG 520


>gi|297265142|ref|XP_001114700.2| PREDICTED: autophagy-related protein 16-1 isoform 2 [Macaca
           mulatta]
          Length = 588

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 312 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 360

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 361 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 402

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 403 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 454

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 455 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAVKQ-TFS 508

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 509 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 566

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 567 SPSGSHVV 574


>gi|261416476|ref|YP_003250159.1| hypothetical protein Fisuc_2090 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261372932|gb|ACX75677.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326134|gb|ADL25335.1| putative lipoprotein, TIGR02171 [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 900

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 68/198 (34%), Gaps = 23/198 (11%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R     + + AP   + G+R +            ++D + +     ++T    +      
Sbjct: 207 RDTTITNYVGAPDGGNIGERVVKGGSYRNEPAAMTLDNRGDVYTVTSSTKANYV------ 260

Query: 312 DSSQIVFESDREGKEQLYVMQSNG----SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
              ++ F            M + G    S    ++   E       +    + + F   +
Sbjct: 261 -GFRLAF----GKIPDAVWMNAKGIAIASPINALTTSAELRKSTKTYH---NKLVF--RN 310

Query: 368 GEKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLN 424
            E   I ++        +  +++  +   PT SP GR + FS K +G +G S+LY   L+
Sbjct: 311 DETGNIAIINFTNGTPTVSEIIDTIDAYHPTLSPDGRFVAFSTKYEGISGTSELYVRRLD 370

Query: 425 GRNETLINTPAYASDPQW 442
                       A+ P+W
Sbjct: 371 STELKYKLDVESAAIPRW 388


>gi|166362940|ref|YP_001655213.1| hypothetical protein MAE_01990 [Microcystis aeruginosa NIES-843]
 gi|166085313|dbj|BAG00021.1| hypothetical protein MAE_01990 [Microcystis aeruginosa NIES-843]
          Length = 492

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 73/209 (34%), Gaps = 21/209 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-----SSNGKRALI 274
           S   +++AY           Y +     R   R GN     LA  F     S +   A I
Sbjct: 92  SWAGRRLAYTLTSPIPYGEKYHLQIEGAREQFRSGNRLGQTLA-IFEREFKSRDRAFAYI 150

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DRE--GKEQLY 329
               +E   +   +L       LT      ++  + PD  +I+F +   +R   G  +L 
Sbjct: 151 GTNGEEQGRLIFYNLTEEKKTLLTPANLTVMAFEFYPDGKKILFSAVAKNRGIEGIRELQ 210

Query: 330 VMQSNGSDQ----KRISQDKEASYFDPVWSPQGDLIAF---TKFSGEKFAIGVMKKDGSQ 382
           + Q + S      + +  +K+        +  G+ I      + +   F +  +K     
Sbjct: 211 LYQVDSSQSPLKIELVLDNKDYQNNHFDLAKDGETIVVQRIERRNPINFDLWAVKSGEKP 270

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           ++L ++         +P  ++L  ++ + 
Sbjct: 271 QQLNIQGGEFL---IAPDSKTLAVTQGEG 296


>gi|109101508|ref|XP_001114814.1| PREDICTED: autophagy-related protein 16-1 isoform 6 [Macaca
           mulatta]
          Length = 607

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 331 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 379

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 380 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 421

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 422 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 473

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 474 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAVKQ-TFS 527

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 528 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 585

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 586 SPSGSHVV 593


>gi|325109594|ref|YP_004270662.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Planctomyces brasiliensis DSM 5305]
 gi|324969862|gb|ADY60640.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Planctomyces brasiliensis DSM 5305]
          Length = 686

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 3/83 (3%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVEDSN-LQAPTWSP 399
                       SP G  I+F K       + V +      + R L +    L   TW+ 
Sbjct: 44  FFGNPQISSGQLSPDGKFISFMKPYKGIMNVWVKEFAAPFDEARPLTDSKRPLYGYTWTE 103

Query: 400 SGRSLIFSRKKDGDTGSKLYSID 422
            G+ ++F +  DGD    L+++D
Sbjct: 104 DGKYILFVKDSDGDENINLFAVD 126



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/156 (11%), Positives = 53/156 (33%), Gaps = 15/156 (9%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFINISAS 308
           + +      I + + S +GK           M+++  +  +  +    LT++       +
Sbjct: 41  RDLFFGNPQISSGQLSPDGKFISFMKPYKGIMNVWVKEFAAPFDEARPLTDSKRPLYGYT 100

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSN----------GSDQKRISQDKEASYFDPVWS--- 355
           ++ D   I+F  D +G E + +   +            + + ++  K+ +      S   
Sbjct: 101 WTEDGKYILFVKDSDGDENINLFAVDPAAKPAEGKETPESRNLTPLKDVTARIVHASQLN 160

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           P    +           +  +K    +  L+ ++ +
Sbjct: 161 PDLLWVGLNDRDKAWHDLYRLKISTGELELVYKNED 196


>gi|296185873|ref|ZP_06854279.1| hypothetical protein CLCAR_1313 [Clostridium carboxidivorans P7]
 gi|296049541|gb|EFG88969.1| hypothetical protein CLCAR_1313 [Clostridium carboxidivorans P7]
          Length = 290

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 67/154 (43%), Gaps = 15/154 (9%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            +   +Y +       +++ N   + ++     D    ++ ++ +   ++Y M+++GSD+
Sbjct: 70  SDKFSVYKIKKDGTGKQQIGNEHGMYLALK---DGW--IYYANLDDGSKIYKMRTDGSDK 124

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           K +  D   +Y   V    GD I +     E   +  +K DGS+++ L   ++       
Sbjct: 125 KLLCNDSAENYMSVV----GDWIYYC--DNENNNLYRIKLDGSEKQKLNNSNSRNINI-- 176

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             G  + +S   D D G  LY + L+G    +++
Sbjct: 177 -EGNYIYYSVIDDNDNGL-LYKMKLDGSENKMLS 208



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 58/167 (34%), Gaps = 17/167 (10%)

Query: 268 NGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-FESDREG 324
           +G          +D+    Y +         LT+   + +  ++  D      +      
Sbjct: 14  DGDYIYYINYYGEDQKNCFYKMKNDGTERSELTDDAPVYV--NFQDDYIYYAKYNKVDSD 71

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           K  +Y ++ +G+ +++I  +             G  I +         I  M+ DGS ++
Sbjct: 72  KFSVYKIKKDGTGKQQIGNEHGMYLALK----DG-WIYYANLDDGS-KIYKMRTDGSDKK 125

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           LL  DS     +    G  + +   ++      LY I L+G  +  +
Sbjct: 126 LLCNDSAENYMSVV--GDWIYYCDNENN----NLYRIKLDGSEKQKL 166



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 100/260 (38%), Gaps = 26/260 (10%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F    ++ ++       K S+  + +DG   + +       L       +   + YA  D
Sbjct: 55  FQDDYIYYAKYNKVDSDKFSVYKIKKDGTGKQQIGNEHGMYLALK----DG-WIYYANLD 109

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             D  ++Y M T      K + N  +          G         +E  ++Y + L  +
Sbjct: 110 --DGSKIYKMRTD-GSDKKLLCNDSAENYMSVV---GDWIYYC--DNENNNLYRIKLDGS 161

Query: 293 ATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
             ++L N+   NI+       + I +   D      LY M+ +GS+ K +S    ++  +
Sbjct: 162 EKQKLNNSNSRNINIE----GNYIYYSVIDDNDNGLLYKMKLDGSENKMLSDVDCSTAVE 217

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                QG+ +  + F+     +  +K DG+    + ++ ++ +   +  G  +       
Sbjct: 218 V----QGEYVYCSGFNSNG--VYRIKNDGTGYEKISQNKSVLSLYVA--GDWVYHLDFMS 269

Query: 412 GDTGSKLYSIDLNGRNETLI 431
           G+  SKLY + L+G +  ++
Sbjct: 270 GNMTSKLYRMKLDGSSNEIV 289


>gi|301783725|ref|XP_002927275.1| PREDICTED: WD repeat-containing protein 5B-like [Ailuropoda
           melanoleuca]
 gi|281354018|gb|EFB29602.1| hypothetical protein PANDA_017033 [Ailuropoda melanoleuca]
          Length = 330

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/226 (16%), Positives = 83/226 (36%), Gaps = 20/226 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K +      I
Sbjct: 31  YALKFTLMGHTEAVSSVKFSPNGEWLASSSADK----VIIIWGAYDGKYEKTLYGHNLEI 86

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+  R + S   D+ + I+  D++S    + L          +++P S+ I+  
Sbjct: 87  SDVAWSSDSSRLV-SASDDKTLKIW--DVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISG 143

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + + +       +             ++  G LI    + G      +    
Sbjct: 144 SF---DESVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDG---VCRIWDAA 197

Query: 380 GSQ-ERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             Q  + LV+D N  +    +SP+G+ L+ +     D   KL+   
Sbjct: 198 SGQCLKTLVDDDNAPISFVKFSPNGKYLLIATL---DNTLKLWDYS 240



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 63/172 (36%), Gaps = 9/172 (5%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG   + L    +  + +  +S +  ++  A+ D      + + D R  +  K +    
Sbjct: 71  YDGKYEKTLY-GHNLEISDVAWSSDSSRLVSASDDK----TLKIWDVRSGKCLKTLKGHS 125

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           + +    F+      +IS   DE++ I+ V       + L+       +  ++   S IV
Sbjct: 126 NYVFCCNFNPP-SNLIISGSFDESVKIWEV-KTGKCLKTLSAHSDPVSAVHFNCSGSLIV 183

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             S  +G  +++   ++G   K +  D  A      +SP G  +        
Sbjct: 184 SGSY-DGVCRIWDA-ASGQCLKTLVDDDNAPISFVKFSPNGKYLLIATLDNT 233


>gi|225558128|gb|EEH06413.1| WD domain-containing protein [Ajellomyces capsulatus G186AR]
          Length = 515

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 58/139 (41%), Gaps = 9/139 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           ++E +VS     ++ + D   +N          + +    FSP+   +A A++D+     
Sbjct: 370 ITERLVSASDDFTMFLWDPATSNKPVARLLGHQKEVNHVTFSPDGAYIASASFDN----H 425

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
           V L + R  +    +      +    FS++  R L+S  KD  + ++  D+++      L
Sbjct: 426 VKLWNARDGKFISSLRGHVGAVYQCCFSAD-SRLLVSSSKDTTLKVW--DVRTGKLFMDL 482

Query: 298 TNTLFINISASYSPDSSQI 316
              L    +  +SPD  ++
Sbjct: 483 PGHLDEVYAVDWSPDGEKV 501



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 40/139 (28%), Gaps = 6/139 (4%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            K+        D   ++L D      P  R+   +  +    FS +G     S   D  +
Sbjct: 368 NKITERLVSASDDFTMFLWDPATSNKPVARLLGHQKEVNHVTFSPDGAYIA-SASFDNHV 426

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +++          L   +       +S DS  +V  S       L V            
Sbjct: 427 KLWNA-RDGKFISSLRGHVGAVYQCCFSADSRLLVSSSK---DTTLKVWDVRTGKLFMDL 482

Query: 343 QDKEASYFDPVWSPQGDLI 361
                  +   WSP G+ +
Sbjct: 483 PGHLDEVYAVDWSPDGEKV 501



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 40/132 (30%), Gaps = 4/132 (3%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++     +    RL          ++SPD + I   S       + +  
Sbjct: 374 LVSASDDFTMFLWDPATSNKPVARLLGHQKEVNHVTFSPDGAYIASASF---DNHVKLWN 430

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +         +    + +   +S    L+  +        +  ++       L      +
Sbjct: 431 ARDGKFISSLRGHVGAVYQCCFSADSRLLV-SSSKDTTLKVWDVRTGKLFMDLPGHLDEV 489

Query: 393 QAPTWSPSGRSL 404
            A  WSP G  +
Sbjct: 490 YAVDWSPDGEKV 501


>gi|158291205|ref|XP_312729.4| Anopheles gambiae str. PEST AGAP012525-PA [Anopheles gambiae str.
           PEST]
 gi|157017781|gb|EAA08293.5| AGAP012525-PA [Anopheles gambiae str. PEST]
          Length = 303

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 75/227 (33%), Gaps = 17/227 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +       +    +SP+++ +  ++ D +    + + D         +    + I+ 
Sbjct: 9   PRRVLKGHQAKVLCSNWSPDKRHIVSSSQDGK----LIIWDAFTTNKEHAVTMPTTWIMG 64

Query: 263 PRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQIVF 318
             ++ +G         D  + +Y +    D+ S      T+T +  +S    P+S Q + 
Sbjct: 65  CSYAPSGNLVA-CGGLDNKVTVYPITLEEDISSRKKTVGTHTSY--MSCCIFPNSDQQIL 121

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMK 377
                G     +         +              +P      F   S +K A I  M+
Sbjct: 122 TG--SGDSTCALWDVESGQLLQSFHGHTGDVMSIDLAPNETGNTFVSGSCDKMAFIWDMR 179

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                +      S++ +  + PSG ++        D+  +L+ +  +
Sbjct: 180 SGHVVQSFEGHQSDINSVKFHPSGDAI---STGSDDSTCRLFDMRAD 223


>gi|288541355|ref|NP_082496.3| WD repeat domain 17 isoform 1 [Mus musculus]
 gi|148703701|gb|EDL35648.1| WD repeat domain 17, isoform CRA_d [Mus musculus]
          Length = 1297

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 72/197 (36%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + ++F   ++P +   +A AT  +      ++ D 
Sbjct: 394 TASFDGTIKVWDINTLTAVYTSPGNEGVIFALSWAPGDLNCIAGATSRNG----AFIWDI 449

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R   + ++ I    +S  + KR   +   D    I +VD       +      
Sbjct: 450 QKGKIIQRFNEHGKNGIFYIAWSHKDSKRIA-TCSGDGFCIIRTVD--GKLLHKY-KHPA 505

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   +++ + ++ +   ++     A  F   WSP  + I 
Sbjct: 506 AVFGCDWSQNNKDMIATGCEDKNIRVFYVATSSNQPLKVFSGHTARVFHVKWSPLREGIL 565

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 566 CSGSDDGSVRIWDYTQD 582


>gi|148703699|gb|EDL35646.1| WD repeat domain 17, isoform CRA_b [Mus musculus]
          Length = 1319

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 72/197 (36%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + ++F   ++P +   +A AT  +      ++ D 
Sbjct: 416 TASFDGTIKVWDINTLTAVYTSPGNEGVIFALSWAPGDLNCIAGATSRNG----AFIWDI 471

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R   + ++ I    +S  + KR   +   D    I +VD       +      
Sbjct: 472 QKGKIIQRFNEHGKNGIFYIAWSHKDSKRIA-TCSGDGFCIIRTVD--GKLLHKY-KHPA 527

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   +++ + ++ +   ++     A  F   WSP  + I 
Sbjct: 528 AVFGCDWSQNNKDMIATGCEDKNIRVFYVATSSNQPLKVFSGHTARVFHVKWSPLREGIL 587

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 588 CSGSDDGSVRIWDYTQD 604


>gi|288541357|ref|NP_001165623.1| WD repeat domain 17 isoform 2 [Mus musculus]
 gi|26336304|dbj|BAC31837.1| unnamed protein product [Mus musculus]
          Length = 1290

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 72/197 (36%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + ++F   ++P +   +A AT  +      ++ D 
Sbjct: 387 TASFDGTIKVWDINTLTAVYTSPGNEGVIFALSWAPGDLNCIAGATSRNG----AFIWDI 442

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R   + ++ I    +S  + KR   +   D    I +VD       +      
Sbjct: 443 QKGKIIQRFNEHGKNGIFYIAWSHKDSKRIA-TCSGDGFCIIRTVD--GKLLHKY-KHPA 498

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   +++ + ++ +   ++     A  F   WSP  + I 
Sbjct: 499 AVFGCDWSQNNKDMIATGCEDKNIRVFYVATSSNQPLKVFSGHTARVFHVKWSPLREGIL 558

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 559 CSGSDDGSVRIWDYTQD 575


>gi|23272636|gb|AAH28268.1| WD repeat domain 17 [Mus musculus]
          Length = 1273

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 72/197 (36%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + ++F   ++P +   +A AT  +      ++ D 
Sbjct: 370 TASFDGTIKVWDINTLTAVYTSPGNEGVIFALSWAPGDLNCIAGATSRNG----AFIWDI 425

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R   + ++ I    +S  + KR   +   D    I +VD       +      
Sbjct: 426 QKGKIIQRFNEHGKNGIFYIAWSHKDSKRIA-TCSGDGFCIIRTVD--GKLLHKY-KHPA 481

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   +++ + ++ +   ++     A  F   WSP  + I 
Sbjct: 482 AVFGCDWSQNNKDMIATGCEDKNIRVFYVATSSNQPLKVFSGHTARVFHVKWSPLREGIL 541

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 542 CSGSDDGSVRIWDYTQD 558


>gi|58260132|ref|XP_567476.1| hypothetical protein CNJ00970 [Cryptococcus neoformans var.
           neoformans JEC21]
 gi|134116606|ref|XP_772975.1| hypothetical protein CNBJ2510 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50255595|gb|EAL18328.1| hypothetical protein CNBJ2510 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57229526|gb|AAW45959.1| hypothetical protein CNJ00970 [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 1055

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/249 (13%), Positives = 75/249 (30%), Gaps = 39/249 (15%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           ++T S    +         ++VA  + D      V +++ +       + +    + +  
Sbjct: 94  FVTRSSGVPIRWLSVDKAGERVAVCSDDM----VVKIVNLKDTTKVSLVSDNNKPVRSAT 149

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL------TNTLFINIS--ASYSPDSSQI 316
           +   GK    +   D  + +Y     +    ++       +    + S  A + P  +  
Sbjct: 150 WDPTGKYLT-TTSCDGKLKVYDTSGSTPYCVKVFEGVIAASDSDSDTSCYAQWHPSGNYF 208

Query: 317 VFESDREGKEQLYVMQSNG-SDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                      + V   +G   Q   + D   A   +  WSP G  +A    +     + 
Sbjct: 209 A---VPTRTNDIAVFGRDGWGRQSSYTPDGPKALIGELAWSPNGKYLAVAAAT----NLY 261

Query: 375 VMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI- 431
           +   +  Q        D  +    +SP+   L F+               L+G     + 
Sbjct: 262 IFSSETRQPIGSYTCPDGAISGLQFSPNANLLGFTS--------------LDGSFHRWME 307

Query: 432 NTPAYASDP 440
             P+   DP
Sbjct: 308 PIPSELPDP 316


>gi|332708526|ref|ZP_08428500.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332352623|gb|EGJ32189.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 123

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 43/100 (43%), Gaps = 5/100 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           ++   +  L   +FSP+ + +A A+ D     R+ L D    +  + +   R  + +  F
Sbjct: 1   MSSGHNNQLTSIKFSPDGKLLASASLDS----RIKLWDVTTGKELQTLIGHRHWVNSVSF 56

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           S +GK    S   D  + +++++L  +   RL      + 
Sbjct: 57  SPDGKLLA-SAGSDNTVKLWNLELDLDNLMRLGCNWLDDY 95



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 8/86 (9%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWS 398
           +S           +SP G L+A          I +      +E   L+     + + ++S
Sbjct: 1   MSSGHNNQLTSIKFSPDGKLLASASLDS---RIKLWDVTTGKELQTLIGHRHWVNSVSFS 57

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLN 424
           P G+ L        D   KL++++L+
Sbjct: 58  PDGKLLA---SAGSDNTVKLWNLELD 80



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
               + + + +FS +GK    S   D  + ++ V       + L        S S+SPD 
Sbjct: 3   SGHNNQLTSIKFSPDGKLLA-SASLDSRIKLWDV-TTGKELQTLIGHRHWVNSVSFSPDG 60

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +   +  +   +L+ ++ +  +  R+
Sbjct: 61  KLLA-SAGSDNTVKLWNLELDLDNLMRL 87



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/98 (15%), Positives = 31/98 (31%), Gaps = 11/98 (11%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           + S    +LT+         +SPD   +   S      ++ +       + +        
Sbjct: 1   MSSGHNNQLTSIK-------FSPDGKLLASASL---DSRIKLWDVTTGKELQTLIGHRHW 50

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
                +SP G L+A +  S     +  ++ D      L
Sbjct: 51  VNSVSFSPDGKLLA-SAGSDNTVKLWNLELDLDNLMRL 87


>gi|307110854|gb|EFN59089.1| hypothetical protein CHLNCDRAFT_18866 [Chlorella variabilis]
          Length = 347

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 59/173 (34%), Gaps = 22/173 (12%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-------TNTLFINI 305
           +      +    +S +G     S   D  + I+  D  +     L       T+T  I  
Sbjct: 14  LTGHTDRVWQVSWSPSGDMLA-SCGGDRTVRIWRRDPGAQPERWLCAAILDDTHTRTI-R 71

Query: 306 SASYSPDSSQIVFES-DREGKEQLYVMQSNGS--DQKRISQDKEASYFDPVWSPQGDLIA 362
           SA +SP    +   S DR       V Q  G   +   + +  E+   +  W+P G L+A
Sbjct: 72  SACWSPCGRYLATASFDRTTA----VWQHAGGVWEVVAMLEGHESEVKEVAWNPNGGLLA 127

Query: 363 FTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKD 411
                   +   V    G +  ++        +++   W P G  L+ +   D
Sbjct: 128 TCSRDKSVWLWEVQP--GQEYEVVDVKHGHSQDVKTVRWHPQGEVLVSASYDD 178



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 53/182 (29%), Gaps = 16/182 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-----NFRSMIL 261
                  +++  +SP+   +A    D    +R++  D                     I 
Sbjct: 14  LTGHTDRVWQVSWSPSGDMLASCGGD--RTVRIWRRDPGAQPERWLCAAILDDTHTRTIR 71

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSSQIVF 318
           +  +S  G+    +   D    ++         E    L          +++P+   +  
Sbjct: 72  SACWSPCGRYLA-TASFDRTTAVWQ--HAGGVWEVVAMLEGHESEVKEVAWNPNGGLLAT 128

Query: 319 ESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S R+    L+ V      +   +            W PQG+++    +      + V +
Sbjct: 129 CS-RDKSVWLWEVQPGQEYEVVDVKHGHSQDVKTVRWHPQGEVLVSASYDDS-IKLWVEE 186

Query: 378 KD 379
            D
Sbjct: 187 DD 188


>gi|298245029|ref|ZP_06968835.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297552510|gb|EFH86375.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 505

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 73/222 (32%), Gaps = 27/222 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +       +   R+SP+ Q +A       +   VYL    I+   K+     + + A  
Sbjct: 205 TVFAHHQGQIQSVRWSPDGQMIA----SGGNDAHVYLWQ--INGTIKQNFQLPAPVSALA 258

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN----TLFINISASYSPDSSQIVFES 320
           ++ +G+R  +        +       +     L            S +++    Q +   
Sbjct: 259 WAPDGQRLAV------GANTQVTFFNTGQKTMLGRLVRAHTGRVTSVAWAGQGGQQIVSG 312

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             + +  ++   S       + Q    +     W+  GD++A +   G    I V +   
Sbjct: 313 GLDHRAIVW--DSTTYRPLHVFQRHTTAIESVSWNAAGDVVASSSLGG---VIRVWRAAT 367

Query: 381 SQERL-LVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            +E   L  D    ++A  + P G  L  +     D   +++
Sbjct: 368 VKETHGLFMDVAPTMRAVAFEPGGMRLACA---GSDGVLRIW 406



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 18/202 (8%), Positives = 59/202 (29%), Gaps = 23/202 (11%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
             P      Q  A +                  +      + +  I + R+S +G+    
Sbjct: 169 LHPAMQSQGQTPAKSKNTAPPPTPAKPQVPNSAKTITVFAHHQGQIQSVRWSPDGQMIA- 227

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV--------FESDREGKE 326
           S   D  + ++ ++       +L        + +++PD  ++         F +  +   
Sbjct: 228 SGGNDAHVYLWQINGTIKQNFQL---PAPVSALAWAPDGQRLAVGANTQVTFFNTGQKTM 284

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
              +++++      ++   +              I +   +     +         +R  
Sbjct: 285 LGRLVRAHTGRVTSVAWAGQGGQQIVSGGLDHRAIVWDSTTYRPLHVF--------QRHT 336

Query: 387 VEDSNLQAPTWSPSGRSLIFSR 408
                +++ +W+ +G  +  S 
Sbjct: 337 TA---IESVSWNAAGDVVASSS 355



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 72/209 (34%), Gaps = 36/209 (17%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            Q++     D     R  + D+   R         + I +  +++ G     S      +
Sbjct: 306 GQQIVSGGLDH----RAIVWDSTTYRPLHVFQRHTTAIESVSWNAAGDVVA-SSSLGGVI 360

Query: 283 DIYSVDLQSNATERLTNTLFINISAS-----YSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            ++       AT + T+ LF++++ +     + P   ++   +  +G  +++    NG  
Sbjct: 361 RVWRA-----ATVKETHGLFMDVAPTMRAVAFEPGGMRLA-CAGSDGVLRIW----NGEA 410

Query: 338 QKRISQDKEA---------------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            ++  Q +                 S     WSP G  IA     G        +K    
Sbjct: 411 CQQPGQGRFGPQCMDTPMRLPVTKASLLSLAWSPDGRFIAVGSQDGT-LTFFYPEKSQKP 469

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             ++ +   + +  WS  G+ ++ +  ++
Sbjct: 470 LFVMHQGIPVTSVAWSYDGKHVVTTTGQN 498



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 5/57 (8%)

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
               +Q+  WSP G+ +       G   + +Y   +NG  +     PA  S   W  
Sbjct: 210 HQGQIQSVRWSPDGQMIA-----SGGNDAHVYLWQINGTIKQNFQLPAPVSALAWAP 261


>gi|149237737|ref|XP_001524745.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146451342|gb|EDK45598.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 390

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 50/140 (35%), Gaps = 10/140 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R               SP  ++ A    +      + +  T        I +   ++ +
Sbjct: 246 LRKTLTGHRSSATSVAISPTGREFAVGVSEG----IISVWQTSSMMNEYVIADIDEVVAS 301

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFE 319
             FS +G    +S  KD    IYS D ++     + N+L  N++ S   + P  +   + 
Sbjct: 302 LDFSRDGGYIAVSFDKDSNSMIYSTDERTK-LFEVPNSLSGNMTFSSICWYPTKTAFAYS 360

Query: 320 SDREGKEQLYVMQSNGSDQK 339
           SD      + +M    S ++
Sbjct: 361 SDHG--TTITLMNKPDSSER 378


>gi|313241286|emb|CBY33563.1| unnamed protein product [Oikopleura dioica]
          Length = 763

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 70/224 (31%), Gaps = 25/224 (11%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG--------ANIRYLT 207
           H   D  Y     +K   +        S  SG     L     DG          +R   
Sbjct: 92  HDRIDVSYHLKLEKKWPAHEGAAIQVISSPSGS---ELASCGEDGVVKVWSKSGLLRSTL 148

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +    ++   +SP+  KV YA    +  + +  +     +  +       ++    +  
Sbjct: 149 TNLGHAVYALDWSPDGSKVVYA---CQSKIEIKTLSGNTKQTSEVWTAHEPVVSCVTW-G 204

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G     S  +D    I+  DL      +     F   S S+SP++  ++      G   
Sbjct: 205 SGDTIA-SGGEDGKYKIW--DLFGRLLFQSAEHQFPITSISFSPNAESLLV-----GTFG 256

Query: 328 LYVM-QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +      +G     + Q    S F   WS   +LIA T     K
Sbjct: 257 IVKYCDPSGKSISSVQQTNLGSPFRFCWSQD-NLIAATGTGSGK 299



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 29/228 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-----NFRSMILAPRFSSNGKRALISV 276
           +  K+   T + ++   V   D   D  P  +      N +   +    S +G   +I+ 
Sbjct: 30  DNHKLTVTTINKKE--NVAEFDLGADAYPVDLTIMPSLNRKGCQICVACS-DGSITMINY 86

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            KDE+ D   V       ++        I    SP  S++       G++ +  + S   
Sbjct: 87  NKDESHDRIDVSYHLKLEKKWPAHEGAAIQVISSPSGSELASC----GEDGVVKVWSKSG 142

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             +    +   + +   WSP G  + +   S     I +    G   +   E      P 
Sbjct: 143 LLRSTLTNLGHAVYALDWSPDGSKVVYACQS----KIEIKTLSG-NTKQTSEVWTAHEPV 197

Query: 397 WS----PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            S     SG ++        D   K++  DL GR   L+   A    P
Sbjct: 198 VSCVTWGSGDTIA---SGGEDGKYKIW--DLFGR---LLFQSAEHQFP 237


>gi|313226331|emb|CBY21475.1| unnamed protein product [Oikopleura dioica]
          Length = 763

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/224 (17%), Positives = 70/224 (31%), Gaps = 25/224 (11%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG--------ANIRYLT 207
           H   D  Y     +K   +        S  SG     L     DG          +R   
Sbjct: 92  HDRIDVSYHLKLEKKWPAHEGAAIQVISSPSGS---ELASCGEDGVVKVWSKSGLLRSTL 148

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +    ++   +SP+  KV YA    +  + +  +     +  +       ++    +  
Sbjct: 149 TNLGHAVYALDWSPDGSKVVYA---CQSKIEIKTLSGNTKQTSEVWTAHEPVVSCVTW-G 204

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G     S  +D    I+  DL      +     F   S S+SP++  ++      G   
Sbjct: 205 SGDTIA-SGGEDGKYKIW--DLFGRLLFQSAEHQFPITSISFSPNAESLLV-----GTFG 256

Query: 328 LYVM-QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +      +G     + Q    S F   WS   +LIA T     K
Sbjct: 257 IVKYCDPSGKSISSVQQTNLGSPFRFCWSQD-NLIAATGTGSGK 299



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 75/228 (32%), Gaps = 29/228 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-----NFRSMILAPRFSSNGKRALISV 276
           +  K+   T + ++   V   D   D  P  +      N +   +    S +G   +I+ 
Sbjct: 30  DNHKLTVTTINKKE--NVAEFDLGADAYPVDLTIMPSLNRKGCQICVACS-DGSITMINY 86

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            KDE+ D   V       ++        I    SP  S++       G++ +  + S   
Sbjct: 87  NKDESHDRIDVSYHLKLEKKWPAHEGAAIQVISSPSGSELASC----GEDGVVKVWSKSG 142

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             +    +   + +   WSP G  + +   S     I +    G   +   E      P 
Sbjct: 143 LLRSTLTNLGHAVYALDWSPDGSKVVYACQS----KIEIKTLSG-NTKQTSEVWTAHEPV 197

Query: 397 WS----PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
            S     SG ++        D   K++  DL GR   L+   A    P
Sbjct: 198 VSCVTWGSGDTIA---SGGEDGKYKIW--DLFGR---LLFQSAEHQFP 237


>gi|284051408|ref|ZP_06381618.1| peptidase S9, prolyl oligopeptidase active site region [Arthrospira
           platensis str. Paraca]
          Length = 555

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 15/129 (11%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFSGEKFAIGVMKK 378
             L  +  N  +  +I       Y  P  S  G  + +         + G +  +  + +
Sbjct: 73  NTLISLNLNNPEDIQILATGADFYASPNLSKDGSRLCWICWYHPNMPWDGTELWVAEVTE 132

Query: 379 DGS-QERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           DG+  ++  V     ++   P WSP G  L F   +       LY +  + + E L   P
Sbjct: 133 DGTLDQQKRVAGGVEESIFQPQWSPDGT-LYFVSDRAN--WWNLYRVR-DQKIEPLFPLP 188

Query: 435 AYASDPQWV 443
           A    PQWV
Sbjct: 189 AEFGLPQWV 197



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 38/280 (13%), Positives = 88/280 (31%), Gaps = 33/280 (11%)

Query: 141 GKKFFSSPASWRKIAHTISD-----DIYQSITGEKGDFNSRILFVSESVV---------- 185
           G  +FS+ A  R     I+      +I       +G+F    L +               
Sbjct: 7   GTVYFSNFADGRIYRQAIASVAQPTEILPEPITPEGNFRYADLLIDTRRGRLICVREDHS 66

Query: 186 -SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV----- 239
            SG   N+L  ++ +      +  +       P  S +  ++ +  +   ++        
Sbjct: 67  QSGEPVNTLISLNLNNPEDIQILATGADFYASPNLSKDGSRLCWICWYHPNMPWDGTELW 126

Query: 240 ---YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
                 D  +D+  +  G     I  P++S +G        +    ++Y V  +    E 
Sbjct: 127 VAEVTEDGTLDQQKRVAGGVEESIFQPQWSPDGT-LYFVSDRANWWNLYRV--RDQKIEP 183

Query: 297 LTNTLFINISASYSPDSSQIVFESDRE-----GKEQLYVMQSNGSDQKRI-SQDKEASYF 350
           L           +    S   F S R       +  ++ + +   + +++ S D   +Y 
Sbjct: 184 LFPLPAEFGLPQWVFGMSTFGFISQRRLCCAYTQNGIWSLATLDPETQQLRSFDVSYTYI 243

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             V      ++     + E  A+  +  +  +  +L   +
Sbjct: 244 SSVTVQNNSILMLASSATEPTALVELDLNAGEMNVLRSST 283



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 12/133 (9%)

Query: 275 SVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE-----SDREGKEQL 328
           S   +    + S++L +    + L        S + S D S++ +      +      +L
Sbjct: 66  SQSGEPVNTLISLNLNNPEDIQILATGADFYASPNLSKDGSRLCWICWYHPNMPWDGTEL 125

Query: 329 YV--MQSNGS--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +V  +  +G+   QKR++   E S F P WSP G  + F       + +  ++ D   E 
Sbjct: 126 WVAEVTEDGTLDQQKRVAGGVEESIFQPQWSPDGT-LYFVSDRANWWNLYRVR-DQKIEP 183

Query: 385 LLVEDSNLQAPTW 397
           L    +    P W
Sbjct: 184 LFPLPAEFGLPQW 196


>gi|224050106|ref|XP_002193299.1| PREDICTED: WD repeat domain 1 [Taeniopygia guttata]
          Length = 627

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 57/385 (14%), Positives = 119/385 (30%), Gaps = 70/385 (18%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 29  FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVVIRNIDNPAIADIYTE----HAHQVVVA 84

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           +    G       +  + R+WD   ++ ++  ++       + +A               
Sbjct: 85  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDLA--------------- 129

Query: 171 GDFNSRILFVSESVVSGIIKNSLC-----VMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
              +S+ + V            L      V +  G N   +  S D     P        
Sbjct: 130 WTEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHN--KVINSVDIKQTRPYRLATGSD 187

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
              A + +    +              + +    +   RFS +G R   +   D    I+
Sbjct: 188 DNCAAFFEGPPFKFKFT----------LSDHTRFVNCVRFSPDGNRFA-TASADG--QIF 234

Query: 286 SVDLQSNATE-RLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             D ++      L      +      S+SPDSSQ++  S   G +   +    G++    
Sbjct: 235 VYDGKTGEKVCALGGGKAHDGGIYAISWSPDSSQLLSAS---GDKTAKIWDV-GANSIVN 290

Query: 342 SQDKEASYFD----PVWSPQ-------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           + +  ++  D     +W             I +   +     + V+K      + L    
Sbjct: 291 TFNMGSNVLDQQLGCLWQKDHLLTISLSGYINYLDKNNPNKPLRVIKGHSKSIQCLTVHK 350

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTG 415
           N         G+S I+S   DG   
Sbjct: 351 NG--------GKSYIYSGSNDGHIN 367


>gi|255548758|ref|XP_002515435.1| protein with unknown function [Ricinus communis]
 gi|223545379|gb|EEF46884.1| protein with unknown function [Ricinus communis]
          Length = 670

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 68/228 (29%), Gaps = 25/228 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            L       ++   FSP    +  ++ D      + L  T+++            +   +
Sbjct: 413 TLFQGHSGPVYSATFSPLGDFILSSSADT----TIRLWSTKLNANLVCYKGHNYPVWDVQ 468

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS  G     S   D    I+S+D +      L   L       +  + + I   S    
Sbjct: 469 FSPVGHYFA-SASHDRTARIWSMD-RLQPLRILAGHLSDVDCVQWHANCNYIATGSS--- 523

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            + + +      +  RI     +       SP G  +A     G      +M  D S  R
Sbjct: 524 DKTVRLWDVQSGECVRIFIGHRSMILSLAMSPDGRFMASADEDGT-----IMMWDLSSGR 578

Query: 385 LLVEDSNLQAPTWSPSGRSLIFS------RKKDGDTGSKLYSIDLNGR 426
            +       +  W     +L FS           D   KL+ +  + +
Sbjct: 579 CVSPLMGHNSCVW-----TLAFSCEGSLLASGSADCTVKLWDVTSSTK 621



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 61/197 (30%), Gaps = 37/197 (18%)

Query: 128 FRLWDVKDRKQII---GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
            RLW  K    ++   G  +      +  + H  +   +                     
Sbjct: 443 IRLWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTA----------------- 485

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   +  MDR    +R L      +    ++  N   +A  + D      V L D 
Sbjct: 486 -------RIWSMDR-LQPLRILAGHLSDVDCV-QWHANCNYIATGSSDK----TVRLWDV 532

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFI 303
           +     +     RSMIL+   S +G+    S  +D  + ++  DL S      L      
Sbjct: 533 QSGECVRIFIGHRSMILSLAMSPDGRFMA-SADEDGTIMMW--DLSSGRCVSPLMGHNSC 589

Query: 304 NISASYSPDSSQIVFES 320
             + ++S + S +   S
Sbjct: 590 VWTLAFSCEGSLLASGS 606


>gi|126657815|ref|ZP_01728969.1| beta transducin-like protein [Cyanothece sp. CCY0110]
 gi|126621032|gb|EAZ91747.1| beta transducin-like protein [Cyanothece sp. CCY0110]
          Length = 345

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 77/244 (31%), Gaps = 37/244 (15%)

Query: 221 PNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            N   +A+    D     D   V ++     +    +      +     S +G   +   
Sbjct: 103 NNYSSIAFNVEKDILVVGDDQTVMVLSLSTGQKLSFLREHTGKVSDVAISPDGNNIVSVS 162

Query: 277 QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQI---VFESDREGKEQLYVMQ 332
             D+ + I+  DL+S    + +   +    S  Y+PD +        SDR     L    
Sbjct: 163 GDDQTIRIW--DLESGELIKTIGANIGPTTSVQYTPDGTMFITGAIGSDRT----LKFWD 216

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDS 390
           +        S  +     D   S  G  +     +       V   D +  + +   +  
Sbjct: 217 ATTFKLLNTSSQQPGFINDLKISNDGTQLVAAVRN------FVKSWDLTTLQQVWSTKGP 270

Query: 391 NLQAPTW--SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTP-------AYASDP 440
            L+  T   SP  R++  +  K+G     +   DL  GR    +          A++ D 
Sbjct: 271 KLEINTIAVSPDNRTVA-TANKEGT----IMLFDLATGRKLATLQGHRGWVLSLAFSRDG 325

Query: 441 QWVG 444
           Q++ 
Sbjct: 326 QYLY 329



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 76/210 (36%), Gaps = 34/210 (16%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
           +   + +  F  ++ +   + +GK  L+        ++ ++DL++      T      + 
Sbjct: 50  NITVEDLQGFNGVVKSLAITPDGKLLLV---GTGDGELTAIDLETKE----TLYSKAVLV 102

Query: 307 ASYSPDSSQIVFESDRE----GKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +YS     I F  +++    G +Q + V+  +   +    ++      D   SP G+ I
Sbjct: 103 NNYS----SIAFNVEKDILVVGDDQTVMVLSLSTGQKLSFLREHTGKVSDVAISPDGNNI 158

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSK 417
                SG+   I +   +  +    +       PT    ++P G   I +     D   K
Sbjct: 159 V--SVSGDDQTIRIWDLESGELIKTI--GANIGPTTSVQYTPDGTMFI-TGAIGSDRTLK 213

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVGFMD 447
            +    +     L+NT +        GF++
Sbjct: 214 FW----DATTFKLLNTSSQQP-----GFIN 234


>gi|115608973|ref|XP_001193137.1| PREDICTED: similar to WD repeat domain 8, partial
           [Strongylocentrotus purpuratus]
 gi|115610842|ref|XP_797044.2| PREDICTED: similar to WD repeat domain 8, partial
           [Strongylocentrotus purpuratus]
          Length = 396

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/199 (14%), Positives = 73/199 (36%), Gaps = 15/199 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + + +         I++V+ ++        +I    + +++ R+S++G+  L + + 
Sbjct: 42  WSSDSKFIL-CGMYKRGIVQVWSLEQPEWTC--KIDEGSAGLVSVRWSADGRHILTTAEF 98

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +  + ++S  L + +   +           ++ D   +     R+ K+ + V   N    
Sbjct: 99  NLRITVWS--LVNRSVSYIKYPKEAKQGMHFTKDGKYMALAERRDCKDFISVFACNTWQL 156

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ----- 393
            +  +          WSP G ++     S  ++ + +   DG   R +      +     
Sbjct: 157 VKHFETNTRDLAGLEWSPDGRVLC-VWDSLLEYNLLLYSVDG---RCIATFKAYEYALGI 212

Query: 394 -APTWSPSGRSLIFSRKKD 411
            +  WSPS + L       
Sbjct: 213 KSVCWSPSSQFLAIGSYDQ 231


>gi|163848821|ref|YP_001636865.1| WD-40 repeat-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222526774|ref|YP_002571245.1| WD40 repeat-containing serine/threonine protein kinase
           [Chloroflexus sp. Y-400-fl]
 gi|163670110|gb|ABY36476.1| WD-40 repeat protein [Chloroflexus aurantiacus J-10-fl]
 gi|222450653|gb|ACM54919.1| serine/threonine protein kinase with WD40 repeats [Chloroflexus sp.
           Y-400-fl]
          Length = 630

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/246 (13%), Positives = 81/246 (32%), Gaps = 15/246 (6%)

Query: 164 QSITGEKGDFNS-RILFVSES---VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           + I   +G  ++ R + VS       +G    ++ +   D   +  L       +    F
Sbjct: 379 EQIHTLRGHESTIRAVAVSPDSTLAATGSDDETIRLWTTDNWQMVQLIHQTGCPVESVCF 438

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +A   + +     + L + R  +           + +  FS +G     +   D
Sbjct: 439 SPDGRYLAVGGWGE----AITLYEIRKGKIEPIGLFTCPFVHSLSFSPDGSMLA-AGCYD 493

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            A+ ++ +       + +        S +++P  + +   S       + + +       
Sbjct: 494 GAIYLWQI-ADHQPLKPIEGFNTFIYSVAFNPAGTILAACS----GTTIRLWRVKDFHAL 548

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                  A      +SP   L+A +          + ++      +L   + +   ++SP
Sbjct: 549 DTLHGHTAPVRGLAFSPCVPLLA-SASEDRSARFWLAEQGQPHPPILEHSAGVSCLSFSP 607

Query: 400 SGRSLI 405
            G+ L 
Sbjct: 608 DGQLLA 613



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 68/192 (35%), Gaps = 11/192 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ V +       +     +  +     SP+    A  + D+     + L  T 
Sbjct: 363 AGYDDYTVGVWNLSSGEQIHTLRGHESTIRAVAVSPDSTLAATGSDDE----TIRLWTTD 418

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  + I      + +  FS +G+   +     EA+ +Y +         L    F++ 
Sbjct: 419 NWQMVQLIHQTGCPVESVCFSPDGRYLAVGGW-GEAITLYEIRKGKIEPIGLFTCPFVH- 476

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S S+SPD S +      +G   +Y+ Q       +  +      +   ++P G ++A   
Sbjct: 477 SLSFSPDGSMLA-AGCYDGA--IYLWQIADHQPLKPIEGFNTFIYSVAFNPAGTILAACS 533

Query: 366 FSGEKFAIGVMK 377
             G    +  +K
Sbjct: 534 --GTTIRLWRVK 543



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 9/117 (7%)

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                R+     +  S S+ P+S  ++   D      + V   +  +Q    +  E++  
Sbjct: 337 GTLLRRMITGSQV-RSLSFDPNSRWLLAGYD---DYTVGVWNLSSGEQIHTLRGHESTIR 392

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLI 405
               SP   L A          I +   D  Q   L+  +    ++  +SP GR L 
Sbjct: 393 AVAVSPDSTLAATGSDDET---IRLWTTDNWQMVQLIHQTGCPVESVCFSPDGRYLA 446



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 52/157 (33%), Gaps = 20/157 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--- 274
            FSP+   +A   YD      +YL      +  K I  F + I +  F+  G        
Sbjct: 479 SFSPDGSMLAAGCYDG----AIYLWQIADHQPLKPIEGFNTFIYSVAFNPAGTILAACSG 534

Query: 275 -SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQ 332
            +++     D +++D                   ++SP    +   S DR  +   + + 
Sbjct: 535 TTIRLWRVKDFHALDTLHG-------HTAPVRGLAFSPCVPLLASASEDRSAR---FWLA 584

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             G     I  +  A      +SP G L+A     G 
Sbjct: 585 EQGQPHPPIL-EHSAGVSCLSFSPDGQLLATGAHDGR 620


>gi|326437056|gb|EGD82626.1| hypothetical protein PTSG_11988 [Salpingoeca sp. ATCC 50818]
          Length = 1211

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 66/184 (35%), Gaps = 25/184 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F P+  ++           RV + +    +    +   + ++    FS++G     ++ 
Sbjct: 25  AFRPDGTQLI-----AGAGARVLVYEVADGQVIASLKGHKDVVYCVAFSNDG-----TLF 74

Query: 278 KDEAMDIYSVDLQSNATE-RLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSN 334
              A D   +         +L      +   + +++P ++ +   S  +     +     
Sbjct: 75  ASGAADKTVIVWDGRTLSGQL-KYSHNDTIQALAFNPLNNILASCSSSD--FGFWSKDIT 131

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
             ++ R+S    A+     W+  G  IA   F+G       ++    +E++L+ D   + 
Sbjct: 132 TVEKTRVSSRICAA----SWTNDGQYIALGHFNGNVS----IRNQRGEEKVLI-DRQGRG 182

Query: 395 PTWS 398
           P WS
Sbjct: 183 PVWS 186



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 23/188 (12%), Positives = 57/188 (30%), Gaps = 20/188 (10%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQ 315
           R  I +  F  +G + +          +   ++        L     +    ++S D + 
Sbjct: 18  RQSIYSLAFRPDGTQLI----AGAGARVLVYEVADGQVIASLKGHKDVVYCVAFSNDGTL 73

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                     ++  ++    +   ++      +     ++P  +++A    S   F    
Sbjct: 74  FA----SGAADKTVIVWDGRTLSGQLKYSHNDTIQALAFNPLNNILASCSSSDFGF---- 125

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
             KD +        S + A +W+  G+ +       G     +   +  G  + LI+   
Sbjct: 126 WSKDITTVEKTRVSSRICAASWTNDGQYIAL-----GHFNGNVSIRNQRGEEKVLIDRQG 180

Query: 436 YASDPQWV 443
               P W 
Sbjct: 181 RG--PVWS 186


>gi|288918418|ref|ZP_06412770.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EUN1f]
 gi|288350181|gb|EFC84406.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           EUN1f]
          Length = 673

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 58/168 (34%), Gaps = 16/168 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               D  +    FSP+   +A A  D    L      T +  + ++      ++ +  FS
Sbjct: 393 LQGHDGTVLSLAFSPSGSILASAGADRTVQLWRPTGPTALRLSGRQPLEHAGLVSSVAFS 452

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-----LTNTLFINISASYSPDSSQIVFESD 321
            NG R L S  +D A+ ++  D+      R     L        S ++S     +     
Sbjct: 453 PNG-RILASGSRDTAIRLW--DVTDPTAPRPVGDPLLGHQGSVWSLAFSRSGRILA---S 506

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
               +++ +         ++  D+  + F  V     D +AF++    
Sbjct: 507 GGADQRIRLWDLTEPTNPQLIHDRLGNQFGQV-----DAVAFSRRRDT 549



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 88/271 (32%), Gaps = 53/271 (19%)

Query: 200 GANIRYL---TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-- 254
           G++ R L       ++ +    FSP  + +A A  D     R+ L D     +P+ +G  
Sbjct: 337 GSDPRALGAPLRGHEKPVHAVAFSPRGKILASAGADQ----RIQLWDLTAPVSPRPLGGP 392

Query: 255 --NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-----NTLFINISA 307
                  +L+  FS +G   L S   D  + ++          RL+         +  S 
Sbjct: 393 LQGHDGTVLSLAFSPSG-SILASAGADRTVQLWR--PTGPTALRLSGRQPLEHAGLVSSV 449

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-- 365
           ++SP+   +   S       + +         R   D    +   VWS     +AF++  
Sbjct: 450 AFSPNGRILASGSR---DTAIRLWDVTDPTAPRPVGDPLLGHQGSVWS-----LAFSRSG 501

Query: 366 ----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR--SLIFSRKKD-------- 411
                 G    I +          L+ D           G+  ++ FSR++D        
Sbjct: 502 RILASGGADQRIRLWDLTEPTNPQLIHDRLGNQ-----FGQVDAVAFSRRRDTLAGASAG 556

Query: 412 ----GDTGSKLYSIDLNGRNETLINTPAYAS 438
               G     L+ +  +  +   ++ P    
Sbjct: 557 ATRVGRATVALWDV-ADPADPRSLSQPMRGR 586


>gi|222632426|gb|EEE64558.1| hypothetical protein OsJ_19410 [Oryza sativa Japonica Group]
          Length = 305

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 72/183 (39%), Gaps = 15/183 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V++S +SG + +S+ + D      + +   R +    P  + +QQ + +A   +   +++
Sbjct: 111 VNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR----PSVAYDQQGLVFAVAMEGGAIKL 166

Query: 240 YLMDTRIDRA--PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-- 295
           +   +          +G   + +   +FS++GK  L++   +    IY +D         
Sbjct: 167 FDSRSYDKGPFDTFLVGGDTAEVSDIKFSNDGKSMLLTTTNN---HIYVLDAYGGDKRCG 223

Query: 296 -RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             L ++  +   A+++PD   ++  S   G   L+    N   +               W
Sbjct: 224 FSLESSPNVATEAAFTPDGQYVISGS---GDGTLHAWNINTIQEIACWNSHIGPITALKW 280

Query: 355 SPQ 357
           +P+
Sbjct: 281 APR 283


>gi|209542690|ref|YP_002274919.1| hypothetical protein Gdia_0510 [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209530367|gb|ACI50304.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 381

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 85/276 (30%), Gaps = 36/276 (13%)

Query: 192 SLCVMDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            + V+D  G   R +   +        R +P+ QK          ++  +  D R     
Sbjct: 109 RISVIDLSGDRPRVVQQVTSAPGATTLRITPD-QKHVLVANGAGGVVTWFRFDGRRLSDR 167

Query: 251 KRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
             I         P     + +G+RAL+S+ K +   ++ + L  +      + L I    
Sbjct: 168 TVIT-LPGAAGFPGGLAITPDGRRALVSLWKGDR--VFVLHLDGDRVTVDPHPLEIGPGP 224

Query: 308 ---SYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
                + D    V      G      L V+    +  + I +    +  +    S  G  
Sbjct: 225 WNIRLTGDGHYAVMGILGHGEGLPGALSVLDLTAAPIREIQRVVVPNAPEGLDISSDGRF 284

Query: 361 IAFTKFSG-----------EKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIF 406
           +A    +G           ++  + V    G     L +      P    ++P G S++ 
Sbjct: 285 VAVVSQNGSAVVPTSPHYHDRGIVTVFSLSGGHLTQLAQAPGTLWPQGLVFAPDGTSIL- 343

Query: 407 SRKKDGDTGSKLYSIDLNGRNETL---INTPAYASD 439
                G     L ++  +G    +      P   +D
Sbjct: 344 ---VQGVMDRMLRTLSWDGTTLAVKGDTPLPGGGAD 376


>gi|170746541|ref|YP_001752801.1| WD-40 repeat-containing protein [Methylobacterium radiotolerans JCM
           2831]
 gi|170653063|gb|ACB22118.1| WD-40 repeat protein [Methylobacterium radiotolerans JCM 2831]
          Length = 337

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 91/269 (33%), Gaps = 20/269 (7%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           +  +     R +A      + Q    + G +   +    +  V+     S+   D  G  
Sbjct: 70  RLVTGGDDGRVVAIRADGGMEQLGLAKGGAWIDALAVHPDGGVAWSAGRSVVARDAKGRE 129

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +  PS  + L    F+P   ++  A Y   + + ++  +      P  +  ++   + 
Sbjct: 130 KTFEAPSSARGLV---FAPKGYRLGVAHY---NGVSLWYPNLET---PAEVVTWKGSHID 180

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             +S +G+  + ++Q++ ++  + +        R++       S S+S D + +      
Sbjct: 181 VTWSPDGRFVVSTMQEN-SLHGWRLQPDRGHM-RMSGYPGKVRSMSWSFDGNWLA----T 234

Query: 323 EGKEQLYVMQSN-----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            G E   V   +          R    + A      + P+  ++A     G    +    
Sbjct: 235 SGAEAAIVWPFDSKEGPTGKAPRECGVRPARVSRVAFHPKAPVLAMGYEDGCILLVRFTD 294

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                 R  V+ S + A  W   G  L+F
Sbjct: 295 AAELLVRPAVQGSGVTALGWDARGGRLLF 323



 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 63/169 (37%), Gaps = 15/169 (8%)

Query: 276 VQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           V   +   + ++       +  L        + +  PD   + + + R     +    + 
Sbjct: 72  VTGGDDGRVVAIRADGGMEQLGLAKGGAWIDALAVHPDGG-VAWSAGRS----VVARDAK 126

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           G ++   + +  +S    V++P+G  +    ++G   ++     +   E +  + S++  
Sbjct: 127 GREK---TFEAPSSARGLVFAPKGYRLGVAHYNG--VSLWYPNLETPAEVVTWKGSHIDV 181

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            TWSP GR ++ + +++   G   + +  +  +  +   P       W 
Sbjct: 182 -TWSPDGRFVVSTMQENSLHG---WRLQPDRGHMRMSGYPGKVRSMSWS 226


>gi|254485514|ref|ZP_05098719.1| peptidase, S9C (acylaminoacyl-peptidase) family [Roseobacter sp.
           GAI101]
 gi|214042383|gb|EEB83021.1| peptidase, S9C (acylaminoacyl-peptidase) family [Roseobacter sp.
           GAI101]
          Length = 689

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 69/237 (29%), Gaps = 39/237 (16%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL----RVYLM 242
           G  + +L  +D  G+ +     S       PR SP+ +++A+ T+D   +     R+ + 
Sbjct: 159 GQAQQTLVALDMQGSALPITVASGGDFYAAPRLSPDGKQLAWLTWDYPSMPWEGTRLQVA 218

Query: 243 DTRIDRAPKRIGNFRS-----------------------MILAPRFSSNGKRALIS--VQ 277
           D         I                             I  P +S +G+   +S   +
Sbjct: 219 DLDAQGNATGIRTIGGAPATKIDPGLNPVLQNAMRYSDEAIAEPLWSPDGQLYCVSDRSE 278

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD--------REGKEQLY 329
            D         +  +    +T       S  +    S   F S+        R+G   L 
Sbjct: 279 IDGTRWWNIHRVDGDDLVAVTAEAAEFTSPLWRLGVSSYGFISETEVLAAYSRDGVWALA 338

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           ++         +  D   +    +    G  + F         +  +  +  +  +L
Sbjct: 339 LVDVTSGALSAV--DLPYTSITHLRVGNGFAVFFGGTFNGPAELIRLDLETHETTVL 393



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 43/150 (28%), Gaps = 35/150 (23%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-------GEKFAIGVMKK 378
           + L  +   GS            Y  P  SP G  +A+  +        G +  +  +  
Sbjct: 163 QTLVALDMQGSALPITVASGGDFYAAPRLSPDGKQLAWLTWDYPSMPWEGTRLQVADLDA 222

Query: 379 DGSQERLLV-----------------------EDSNLQAPTWSPSGRSLIFSRKK---DG 412
            G+   +                          D  +  P WSP G+ L     +   DG
Sbjct: 223 QGNATGIRTIGGAPATKIDPGLNPVLQNAMRYSDEAIAEPLWSPDGQ-LYCVSDRSEIDG 281

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                ++ +D +     +    A  + P W
Sbjct: 282 TRWWNIHRVDGD-DLVAVTAEAAEFTSPLW 310


>gi|119480747|ref|XP_001260402.1| secreted dipeptidyl peptidase [Neosartorya fischeri NRRL 181]
 gi|119408556|gb|EAW18505.1| secreted dipeptidyl peptidase [Neosartorya fischeri NRRL 181]
          Length = 721

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 50/308 (16%), Positives = 98/308 (31%), Gaps = 58/308 (18%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR----DGANIRYLTPSRDQILFEPRFS 220
           S++      +  IL+V+ +         L V       +G     L  S   +      S
Sbjct: 78  SVSEIVWLSDDSILYVNGTNADIPGGVELWVTQASSFGNGYKAASLPASFSGLKTAKTKS 137

Query: 221 PNQQKVAYATYDDEDILRVYLM--------DTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            + + VAY             +                +    + S      FS      
Sbjct: 138 GDIRLVAYGQSYPNGTAYNEELAAAPLSSARIYDSIYVRHWDYWLSTTFNAVFSG----- 192

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----------SYSPDSSQIVFESDR 322
             +++K    + YS+D      + L + +    S             SPD   + F+S  
Sbjct: 193 --TLKKGHGKNGYSLD---GELKNLVSPVKNAESPYPPFGGASDYDLSPDGKWVAFKSKA 247

Query: 323 EGKEQ-------LYVMQSNGSDQKRISQDKE---------ASYFDPVWSPQGDLIAFTKF 366
               +       +Y++  + S+  R     +              PV+SP+ D +A+ + 
Sbjct: 248 PELPKANFTTSYIYLVPHDASETARPINGPDSPGTPKGIKGDSSSPVFSPKSDKLAYFQM 307

Query: 367 SGEKFA-----IGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKL 418
             E +      + V      +    V     ++P    W+P G++LI   +  G T  +L
Sbjct: 308 RDESYESDRRVLYVYSLGSKKTIPSVAGDWDRSPDSVKWTPDGKTLIVGSEDLGRT--RL 365

Query: 419 YSIDLNGR 426
           +S+  N +
Sbjct: 366 FSLPANAK 373



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 66/186 (35%), Gaps = 15/186 (8%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
            K +F +  +++     S   +        +G +              P FSP   K+AY
Sbjct: 251 PKANFTTSYIYLVPHDASETAR------PINGPDSPGTPKGIKGDSSSPVFSPKSDKLAY 304

Query: 229 ATYDDE----DILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
               DE    D   +Y+      +  P   G++     + +++ +GK  ++  +      
Sbjct: 305 FQMRDESYESDRRVLYVYSLGSKKTIPSVAGDWDRSPDSVKWTPDGKTLIVGSEDLGRTR 364

Query: 284 IYSVDLQSN---ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           ++S+   +      +  T+   ++    + PDSS +V  S       +Y  +      K 
Sbjct: 365 LFSLPANAKDDYKPKNFTDGGSVSAY-YFLPDSSLLVTGSALWTNWNVYTAKPEKGVIKT 423

Query: 341 ISQDKE 346
           I+   E
Sbjct: 424 IASANE 429


>gi|219848318|ref|YP_002462751.1| peptidoglycan-binding domain 1 protein [Chloroflexus aggregans DSM
           9485]
 gi|219542577|gb|ACL24315.1| Peptidoglycan-binding domain 1 protein [Chloroflexus aggregans DSM
           9485]
          Length = 478

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/242 (19%), Positives = 84/242 (34%), Gaps = 48/242 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRI------------DRAPKRIGNFRSMILAPRF 265
           R +PN Q++   TY+ + +  + + +               D   +R+      I  PR 
Sbjct: 76  RLAPNGQQLTQITYELQPVRELSVANNGTLVYVTENDLIALDGTGRRVVIDAQTISRPRI 135

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-REG 324
           S +G+R +  +  D   D+   D  S                         V+ S+ R G
Sbjct: 136 SPDGQRVVYRLD-DPTPDLLGTDAPSG------------------------VYISELRGG 170

Query: 325 KEQLYVMQSNGSDQKRISQD---KEASYFDPVWSPQGDLIAFTKFSGEKFAI--GVMKKD 379
           + +L        D + ++ D       Y    WSP G  +        +  I  G +   
Sbjct: 171 QPRLLQAD----DPEPVTPDFSKPAWRYIPVSWSPDGQRLLLYAVMQPEIGIPGGEVVII 226

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFS-RKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           G  +R++   S  +   WS +G  L  +    D D    LY ID+    E+ +   + A 
Sbjct: 227 GPDDRVVRAFSCCEEEIWSVNGDELTVAGGGPDPDLRFGLYRIDVEHGTESPVVARSEAI 286

Query: 439 DP 440
            P
Sbjct: 287 IP 288



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 52/131 (39%), Gaps = 22/131 (16%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            +Q+  +  NG    +I+ + +    +   +  G L+  T+         ++  DG+  R
Sbjct: 71  NDQVMRLAPNGQQLTQITYELQ-PVRELSVANNGTLVYVTEND-------LIALDGTGRR 122

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKK------DGDTGSKLYSIDLNGRNETLIN------ 432
           ++++   +  P  SP G+ +++            D  S +Y  +L G    L+       
Sbjct: 123 VVIDAQTISRPRISPDGQRVVYRLDDPTPDLLGTDAPSGVYISELRGGQPRLLQADDPEP 182

Query: 433 -TPAYASDPQW 442
            TP ++  P W
Sbjct: 183 VTPDFSK-PAW 192



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 62/174 (35%), Gaps = 33/174 (18%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +   +  +        ++T  L      S + + + +V+ ++ +      ++  +G+ ++
Sbjct: 70  QNDQVMRLAPNGQQLTQITYELQPVRELSVANNGT-LVYVTEND------LIALDGTGRR 122

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK--------FAIGVMKKDGSQERLLVED-- 389
            +   +  +   P  SP G  + +                 + + +  G Q RLL  D  
Sbjct: 123 VVIDAQ--TISRPRISPDGQRVVYRLDDPTPDLLGTDAPSGVYISELRGGQPRLLQADDP 180

Query: 390 ----SNLQAP-------TWSPSG-RSLIFSRKKD--GDTGSKLYSIDLNGRNET 429
                +   P       +WSP G R L+++  +   G  G ++  I  + R   
Sbjct: 181 EPVTPDFSKPAWRYIPVSWSPDGQRLLLYAVMQPEIGIPGGEVVIIGPDDRVVR 234



 Score = 36.5 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 61/197 (30%), Gaps = 39/197 (19%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-------ILRVYLMDTRIDRAPK 251
           DG   R +     Q +  PR SP+ Q+V Y   D             VY+ + R    P+
Sbjct: 117 DGTGRRVVID--AQTISRPRISPDGQRVVYRLDDPTPDLLGTDAPSGVYISELR-GGQPR 173

Query: 252 RIGNFRSMILAP------------RFSSNGKRALISVQKDEAMDIYSVDLQSNATE---- 295
            +       + P             +S +G+R L+      A+    + +          
Sbjct: 174 LLQADDPEPVTPDFSKPAWRYIPVSWSPDGQRLLLY-----AVMQPEIGIPGGEVVIIGP 228

Query: 296 --RLTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKEA--- 347
             R+           +S +  ++       D + +  LY +      +  +    EA   
Sbjct: 229 DDRVVRAFSCCEEEIWSVNGDELTVAGGGPDPDLRFGLYRIDVEHGTESPVVARSEAIIP 288

Query: 348 SYFDPVWSPQGDLIAFT 364
               P     GD+ AF 
Sbjct: 289 LVRAPQRMADGDIYAFI 305


>gi|115477088|ref|NP_001062140.1| Os08g0497600 [Oryza sativa Japonica Group]
 gi|42407312|dbj|BAD08715.1| putative GAMYB-binding protein [Oryza sativa Japonica Group]
 gi|113624109|dbj|BAF24054.1| Os08g0497600 [Oryza sativa Japonica Group]
 gi|215767295|dbj|BAG99523.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218201387|gb|EEC83814.1| hypothetical protein OsI_29748 [Oryza sativa Indica Group]
 gi|222640804|gb|EEE68936.1| hypothetical protein OsJ_27811 [Oryza sativa Japonica Group]
          Length = 432

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 54/146 (36%), Gaps = 7/146 (4%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSS 314
           F   +     S +GK   I     +  +   VD  S  T   L   L  + +++++PD  
Sbjct: 261 FPWAVNHTSLSPDGKLVAIV---GDNPEGLIVDTNSGKTVHELRGHLDYSFASAWNPDGR 317

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                 +++   +++ ++ N S    +      +     ++  G  +A  + +     I 
Sbjct: 318 TFA-TGNQDKTCRIWDIR-NLSKSVAVLGGNMGAIRSIRYTSDGRFLAMAEPAD-FVHIF 374

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPS 400
            +     +++++     +   ++SP 
Sbjct: 375 DVGSGYRRKQVVDFFGEISGISFSPD 400



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 48/138 (34%), Gaps = 8/138 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + VA       D     ++DT   +    +        A  ++ +G+    +  +D
Sbjct: 271 SPDGKLVAIV----GDNPEGLIVDTNSGKTVHELRGHLDYSFASAWNPDGRTFA-TGNQD 325

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +   I+ +   S +   L   +    S  Y+ D     F +  E  + +++       ++
Sbjct: 326 KTCRIWDIRNLSKSVAVLGGNMGAIRSIRYTSDGR---FLAMAEPADFVHIFDVGSGYRR 382

Query: 340 RISQDKEASYFDPVWSPQ 357
           +   D         +SP 
Sbjct: 383 KQVVDFFGEISGISFSPD 400



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/119 (15%), Positives = 52/119 (43%), Gaps = 7/119 (5%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           ++D +     +         F   ++P+ +   +AT + +   R++ +   + ++   +G
Sbjct: 288 IVDTNSGKTVHELRGHLDYSFASAWNPDGR--TFATGNQDKTCRIWDIR-NLSKSVAVLG 344

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPD 312
                I + R++S+G+   ++   + A  ++  D+ S    +++ +        S+SPD
Sbjct: 345 GNMGAIRSIRYTSDGRFLAMA---EPADFVHIFDVGSGYRRKQVVDFFGEISGISFSPD 400



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/137 (13%), Positives = 41/137 (29%), Gaps = 6/137 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S SPD   +    D     +  ++ +N        +      F   W+P G   A     
Sbjct: 269 SLSPDGKLVAIVGD---NPEGLIVDTNSGKTVHELRGHLDYSFASAWNPDGRTFATGNQD 325

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                  +     S   L      +++  ++  GR L  +   D      ++ +    R 
Sbjct: 326 KTCRIWDIRNLSKSVAVLGGNMGAIRSIRYTSDGRFLAMAEPADF---VHIFDVGSGYRR 382

Query: 428 ETLINTPAYASDPQWVG 444
           + +++     S   +  
Sbjct: 383 KQVVDFFGEISGISFSP 399


>gi|87307343|ref|ZP_01089488.1| probable threonine/tyrosine-specific protein kinase [Blastopirellula
            marina DSM 3645]
 gi|87290083|gb|EAQ81972.1| probable threonine/tyrosine-specific protein kinase [Blastopirellula
            marina DSM 3645]
          Length = 1752

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 74/230 (32%), Gaps = 31/230 (13%)

Query: 192  SLCVMDRDGANIRYL----TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
            S+CV +  G+  +            ++   R+S + + +   + D      +   D    
Sbjct: 1073 SICVWNVTGSATQPTRGKTLRGHLDVVSSARWSKDGKTLVSGSVDQ----HLRFWDYEAY 1128

Query: 248  RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFINIS 306
            R    I +   ++ A  +SS+G R   +      + I+    L       L         
Sbjct: 1129 RDQLTIQHDHGILTA-AYSSDG-RLAATGDSGGVVRIFQPGLLNGGDVLEL-------HE 1179

Query: 307  ASYSPDSSQIVFESDREGKEQLY---------VMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              +  +S    F +   G   L          V + + ++Q   +     +      SP 
Sbjct: 1180 GDWLAESRATEFGAQFVGPNHLVTQIGGVSAAVWRLDTTEQVS-AFPVGGNSVAIAASPD 1238

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            G+   F    GE   + +    G  E  + + +      +SPSG  L  +
Sbjct: 1239 GEH--FALQDGEASLLRICDFSG-NETTIAQRAKAWGLDFSPSGNKLAIA 1285



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 16/162 (9%)

Query: 251  KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            K +  F   + A   SS+G   L++        I ++DL++  T        I I+A + 
Sbjct: 960  KPLRYFTDGLNAVSLSSDGSTLLLAGGNVRRGQIETLDLETTETSAELALREIPIAACWI 1019

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGE 369
                  V  SD  G    + +     D + +  D+  S  +   ++PQ  L+A     G 
Sbjct: 1020 APGIAAVATSD--GAMSTWTV----GDSEVLEFDRLNSRVNSLDYNPQTGLLAAAMEDGS 1073

Query: 370  KFAIGVMKKDGSQERLL---VEDSNLQAPT---WSPSGRSLI 405
               I V    GS  +         +L   +   WS  G++L+
Sbjct: 1074 ---ICVWNVTGSATQPTRGKTLRGHLDVVSSARWSKDGKTLV 1112


>gi|320198218|gb|EFW72822.1| Putative membrane protein [Escherichia coli EC4100B]
          Length = 625

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 87/246 (35%), Gaps = 23/246 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           GA+   L  SRD       +  N+   + +  D      V  +        +  G   + 
Sbjct: 393 GAHPDSLILSRDG---TKAWVMNRTSNSVSAIDLVAYQHVADIPLEKYDGTRTSGKPGAW 449

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIV 317
           ++A   S + +  L+    +   +I  ++  ++  E            +  + P++ +++
Sbjct: 450 VMA--LSPDERTLLV--PGEGRGNIVRINTITHQKEDFPAGDARGTISAMRFRPENGEVI 505

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F  D +G  ++ +     S   +      + Y     SP G  +A   +  + + I ++ 
Sbjct: 506 FA-DSQGISRISIGDQQTSIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQGYVI-LLN 561

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            +  Q   +   S +    +S  GR + F   K+G     L  +D        ++  A  
Sbjct: 562 INAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----RSLDPQAII 611

Query: 438 SDPQWV 443
             PQ+ 
Sbjct: 612 RHPQYG 617


>gi|307201743|gb|EFN81422.1| WD40 repeat-containing protein SMU1 [Harpegnathos saltator]
          Length = 510

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 64/179 (35%), Gaps = 22/179 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---------ISA 307
           +S +   RFS +G+  + +   D  ++++  +  +    +       +         +S 
Sbjct: 214 KSHVECARFSPDGQYLV-TGSVDGFIEVW--NFTTGKIRKDLKYQAQDNFMMMEQAVLSM 270

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+S DS  +     ++GK +++ +  +G   +R  +          +S     I    F 
Sbjct: 271 SFSRDSEMLA-GGGQDGKIKVWRV-QSGQCLRRFEKAHSKGVTCLQFSRDNSQILSASFD 328

Query: 368 GEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                I +      +         S +    +SP G +LI +     D   K++S+   
Sbjct: 329 TT---IRIHGLKSGKTLKEFRGHGSFVNEVVFSPDGHNLISASS---DGTVKIWSLKTT 381


>gi|300784593|ref|YP_003764884.1| dipeptidyl-peptidase 4 [Amycolatopsis mediterranei U32]
 gi|299794107|gb|ADJ44482.1| dipeptidyl-peptidase 4 [Amycolatopsis mediterranei U32]
          Length = 699

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 59/191 (30%), Gaps = 48/191 (25%)

Query: 264 RFSSNGKRALI---SVQKDEAMDIYSVDLQSNATERLTNT-------------------L 301
           R + +G R L        D    ++S DL + A  +L +                     
Sbjct: 28  RVAPDGSRVLFLRAESGTDPRHSLWSADLATGAETKLVDAAELLPGEEELPAEERARRER 87

Query: 302 FINISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                          VF  +      +LY +     +   ++   + +  DP  SP G  
Sbjct: 88  ARETGGGVVHYGVDAVFTVAVFSLSGKLYTLDLASGE---VTLRVDGAVIDPRPSPAGTH 144

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------------------APTWSPSGR 402
           +A+ +       + V++     +R+LVE+                         W+P GR
Sbjct: 145 VAYVQNR----RLHVLELATGDDRVLVEEEGEDIAWGLAEFIAAEEMDRTRGYWWAPDGR 200

Query: 403 SLIFSRKKDGD 413
           S++  R   G 
Sbjct: 201 SILAERSDRGP 211



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 36/246 (14%), Positives = 76/246 (30%), Gaps = 54/246 (21%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +         ++Y +D        R+      ++ PR S  G          +   ++ 
Sbjct: 103 VFTVAVFSLSGKLYTLDLASGEVTLRV---DGAVIDPRPSPAGTHVAYV----QNRRLHV 155

Query: 287 VDLQSNATERLTNTLFINISA-----------------SYSPDSSQIVFE-SDREGKEQL 328
           ++L +     L      +I+                   ++PD   I+ E SDR    + 
Sbjct: 156 LELATGDDRVLVEEEGEDIAWGLAEFIAAEEMDRTRGYWWAPDGRSILAERSDRGPVPRW 215

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +             + +       +   G   A          + V+  DGS  R+ V 
Sbjct: 216 TIADPA---------NPQHPANVVAYPAAGTTNALVS-------LAVLGLDGS--RVDVA 257

Query: 389 DSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD------ 439
             + +   +  WS  G  L+  + +D      L S+D+   + ++++T +          
Sbjct: 258 PGDWEYLASVHWSAGGAPLLAVQPRDQKRMDVL-SLDVTDGSTSVVHTASDQHWIDIVGG 316

Query: 440 -PQWVG 444
            P W  
Sbjct: 317 VPAWTP 322


>gi|255526504|ref|ZP_05393414.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
 gi|255509823|gb|EET86153.1| conserved hypothetical protein [Clostridium carboxidivorans P7]
          Length = 286

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 67/154 (43%), Gaps = 15/154 (9%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            +   +Y +       +++ N   + ++     D    ++ ++ +   ++Y M+++GSD+
Sbjct: 66  SDKFSVYKIKKDGTGKQQIGNEHGMYLALK---DGW--IYYANLDDGSKIYKMRTDGSDK 120

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           K +  D   +Y   V    GD I +     E   +  +K DGS+++ L   ++       
Sbjct: 121 KLLCNDSAENYMSVV----GDWIYYC--DNENNNLYRIKLDGSEKQKLNNSNSRNINI-- 172

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             G  + +S   D D G  LY + L+G    +++
Sbjct: 173 -EGNYIYYSVIDDNDNGL-LYKMKLDGSENKMLS 204



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 58/167 (34%), Gaps = 17/167 (10%)

Query: 268 NGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-FESDREG 324
           +G          +D+    Y +         LT+   + +  ++  D      +      
Sbjct: 10  DGDYIYYINYYGEDQKNCFYKMKNDGTERSELTDDAPVYV--NFQDDYIYYAKYNKVDSD 67

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           K  +Y ++ +G+ +++I  +             G  I +         I  M+ DGS ++
Sbjct: 68  KFSVYKIKKDGTGKQQIGNEHGMYLALK----DG-WIYYANLDDGS-KIYKMRTDGSDKK 121

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           LL  DS     +    G  + +   ++      LY I L+G  +  +
Sbjct: 122 LLCNDSAENYMSVV--GDWIYYCDNENN----NLYRIKLDGSEKQKL 162



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 100/260 (38%), Gaps = 26/260 (10%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F    ++ ++       K S+  + +DG   + +       L       +   + YA  D
Sbjct: 51  FQDDYIYYAKYNKVDSDKFSVYKIKKDGTGKQQIGNEHGMYLALK----DG-WIYYANLD 105

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             D  ++Y M T      K + N  +          G         +E  ++Y + L  +
Sbjct: 106 --DGSKIYKMRTD-GSDKKLLCNDSAENYMSVV---GDWIYYC--DNENNNLYRIKLDGS 157

Query: 293 ATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
             ++L N+   NI+       + I +   D      LY M+ +GS+ K +S    ++  +
Sbjct: 158 EKQKLNNSNSRNINIE----GNYIYYSVIDDNDNGLLYKMKLDGSENKMLSDVDCSTAVE 213

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                QG+ +  + F+     +  +K DG+    + ++ ++ +   +  G  +       
Sbjct: 214 V----QGEYVYCSGFNSNG--VYRIKNDGTGYEKISQNKSVLSLYVA--GDWVYHLDFMS 265

Query: 412 GDTGSKLYSIDLNGRNETLI 431
           G+  SKLY + L+G +  ++
Sbjct: 266 GNMTSKLYRMKLDGSSNEIV 285


>gi|224091188|ref|XP_002309202.1| predicted protein [Populus trichocarpa]
 gi|222855178|gb|EEE92725.1| predicted protein [Populus trichocarpa]
          Length = 321

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 62/195 (31%), Gaps = 20/195 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S  + + + V D D         +    +++ +F P    +A A         V L DT 
Sbjct: 77  SASLDSFVRVFDVDSNASIATLEAPPSEVWQMKFDPKGTTLAVA---GGGSASVQLWDTE 133

Query: 246 IDRAPKRIG-------------NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
             +    +              + +  +L+  +S +GKR       D  + ++ V  ++ 
Sbjct: 134 KWKLIATLSIPRQEGPKPTDKNSSKKFVLSVAWSPDGKRVA-CGSMDGTISVFDV-ARAK 191

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L        S  YSP   +++F +  +    +Y   + G           +     
Sbjct: 192 FLHHLEGHFMPVRSLVYSPADPRVLFSASDDAHVHMY--DAEGKSMIAALSGHASWVLSV 249

Query: 353 VWSPQGDLIAFTKFS 367
             SP G  IA     
Sbjct: 250 DASPDGAAIATGSSD 264



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 71/245 (28%), Gaps = 34/245 (13%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A ++ +  + D+ ++   + P  +              V L         +        +
Sbjct: 4   AGLKSIENAHDESVWAATWIPATETRPALLMTGSLDETVKLWKPDELTLERTNTGHCLGV 63

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           ++     +G     S   D  + ++ VD  ++    L           + P  + +    
Sbjct: 64  VSVAAHPSG-SIAASASLDSFVRVFDVDSNASIAT-LEAPPSEVWQMKFDPKGTTLAVAG 121

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDP---------------VWSPQGDLIAFTK 365
                 QL+    +    K I+         P                WSP G  +A   
Sbjct: 122 GGSASVQLW----DTEKWKLIATLSIPRQEGPKPTDKNSSKKFVLSVAWSPDGKRVACGS 177

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSI 421
             G    I V     ++ + L        P     +SP+   ++FS   D    + ++  
Sbjct: 178 MDGT---ISVFDV--ARAKFLHHLEGHFMPVRSLVYSPADPRVLFSASDD----AHVHMY 228

Query: 422 DLNGR 426
           D  G+
Sbjct: 229 DAEGK 233


>gi|195026473|ref|XP_001986264.1| GH21263 [Drosophila grimshawi]
 gi|193902264|gb|EDW01131.1| GH21263 [Drosophila grimshawi]
          Length = 805

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 25/144 (17%)

Query: 221 PNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           P+ Q +A      + +  ++ + +T   +  +++   +  +   RFS + +  L SV +D
Sbjct: 571 PDGQLLASTCRASNAEHAQIIIWNTANWKQLQKLSGHQLTVTQLRFSPDARYLL-SVSRD 629

Query: 280 EAMDIYS----------------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
               +Y                  D  +    R+        S  +S D       S R+
Sbjct: 630 RRWSLYERQQIEEPLSNYALVANSDKSNGVHTRII------WSCDWSHDGKYFA-TSSRD 682

Query: 324 GKEQLYVMQSNGSDQKRISQDKEA 347
           GK   +      ++Q   +     
Sbjct: 683 GKVVAWTKSEQATEQSAATSSLNG 706


>gi|146280539|ref|YP_001170692.1| 3-carboxymuconate cyclase [Pseudomonas stutzeri A1501]
 gi|145568744|gb|ABP77850.1| 3-carboxymuconate cyclase [Pseudomonas stutzeri A1501]
          Length = 397

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 47/288 (16%), Positives = 91/288 (31%), Gaps = 35/288 (12%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM--D 197
           +G     +   ++ I   IS  +    T      + R LFVS          SL V+  D
Sbjct: 106 VGAWQRDAKGDYQPIGQAIS--LGDEPTHASLSADGRYLFVSNYGSRPNPGGSLAVLPLD 163

Query: 198 RDGAN-------IRYLTPSRDQILFEPRF-----SPNQQKVAYATYDDEDILRVYLMDTR 245
            DG             +    +    P       SP+  ++  +    + +  VY  D  
Sbjct: 164 EDGRPLPVTQIAAHQASGVHPERQASPHVHSAVPSPDGTRLLVSDLGADRVF-VYRYDPS 222

Query: 246 IDRAPKRIGNFRSMIL----APR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
               P R     S+ L     PR   F  NGK A ++++    +  +     +    +L 
Sbjct: 223 HAERPLRPDEPASIELPAGSGPRHLVFHPNGKHAYLALELSAQVAGFDYTNGTLTRRQLL 282

Query: 299 NTLFINISASYSP-------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
           +    +    +SP       D  + ++ SDR     + V         R  Q + +   +
Sbjct: 283 DLKESDSEVRHSPGAIHTSADG-RFLYVSDRGDYNHIIVFAIEADGTLREIQRRPSEGRE 341

Query: 352 P---VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           P     +P G  +       +   +     +  +    ++   +  P+
Sbjct: 342 PREFAITPDGRFMLIANQLSDALVVIRRDPESGKLGETLQTLAVGRPS 389



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 73/219 (33%), Gaps = 44/219 (20%)

Query: 261 LAPRFSSNGKRALISV-----QKDEAMDIYSVDLQSNAT--ERLTNTLFINISAS----- 308
                S++G+   +S          ++ +  +D         ++       +        
Sbjct: 131 THASLSADGRYLFVSNYGSRPNPGGSLAVLPLDEDGRPLPVTQIAAHQASGVHPERQASP 190

Query: 309 ------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWS------ 355
                  SPD ++++  SD  G ++++V + + S  +R +  D+ AS   P  S      
Sbjct: 191 HVHSAVPSPDGTRLL-VSD-LGADRVFVYRYDPSHAERPLRPDEPASIELPAGSGPRHLV 248

Query: 356 --PQGD--LIA---------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
             P G    +A         F   +G      ++    S   +      +     S  GR
Sbjct: 249 FHPNGKHAYLALELSAQVAGFDYTNGTLTRRQLLDLKESDSEVRHSPGAIHT---SADGR 305

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            L +   +       +++I+ +G    +   P+   +P+
Sbjct: 306 FL-YVSDRGDYNHIIVFAIEADGTLREIQRRPSEGREPR 343



 Score = 40.4 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 61/209 (29%), Gaps = 22/209 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLM--DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           P          +D   L V  +         P+R  +       P  S +G R L+S   
Sbjct: 153 PGGSLAVLPLDEDGRPLPVTQIAAHQASGVHPERQASPHVHSAVP--SPDGTRLLVSDLG 210

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISAS--------YSPDSSQIVFESDREGKEQLYV 330
            + + +Y  D          +        +        + P+        +   +   + 
Sbjct: 211 ADRVFVYRYDPSHAERPLRPDEPASIELPAGSGPRHLVFHPNGKHAYLALELSAQVAGFD 270

Query: 331 MQSNGSDQKRISQDKE------ASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGS-- 381
             +    ++++   KE       S      S  G  +  +        I   ++ DG+  
Sbjct: 271 YTNGTLTRRQLLDLKESDSEVRHSPGAIHTSADGRFLYVSDRGDYNHIIVFAIEADGTLR 330

Query: 382 -QERLLVEDSNLQAPTWSPSGRSLIFSRK 409
             +R   E    +    +P GR ++ + +
Sbjct: 331 EIQRRPSEGREPREFAITPDGRFMLIANQ 359


>gi|153002226|ref|YP_001367907.1| peptidase S9B dipeptidylpeptidase IV subunit [Shewanella baltica
           OS185]
 gi|151366844|gb|ABS09844.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           baltica OS185]
          Length = 767

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 79/216 (36%), Gaps = 17/216 (7%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA----NIRYLTPSRDQ 212
            I +   + +T  +   +   L       +G     + +          N   L     +
Sbjct: 249 RIDESAVEQVTRNEIYADGIKLTEQRYPAAGKNNVDIALAVVTLKDKAINWVSLREENSK 308

Query: 213 ILFEPR--FSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRS-----MILAPR 264
            ++ PR  + P+ + +++     D+  L + L+       PK +   RS     +     
Sbjct: 309 DIYLPRVDWLPDSKHLSFQWQSRDQHQLDLQLVALDALTKPKTLVKERSDAWVNLNNDLH 368

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           F       + + ++D    +Y  DL+     +LT   +      Y  +++  V+ + R+ 
Sbjct: 369 FLKQQSAFIWASERDGFNHLYLFDLKGKLKTQLTKGEWAVDELEYIDETAGWVYFTGRKD 428

Query: 325 KE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                QLY +   G   +R+S  K+A   +PV++  
Sbjct: 429 TPIEKQLYRVPLAGGKVERVS--KQAGMHNPVFADN 462



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/311 (12%), Positives = 98/311 (31%), Gaps = 66/311 (21%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           ++ D     +  ++G      L    + VS +   +L V+D     ++ +T      +  
Sbjct: 160 SLVDKSVTQLPIDEGFATDARLSPKGNFVSFVRDQNLYVLDLATKKLQAMTTDGGGAIKN 219

Query: 217 P----------------RFSPNQQKVAYATYDDEDILR-----VYLMDTRIDRAPKRIGN 255
                             ++P++  +A+   D+  + +     +Y    ++         
Sbjct: 220 AMAEFVAQEEMDRMTGYWWAPDESAIAFTRIDESAVEQVTRNEIYADGIKLTEQRYPAAG 279

Query: 256 FRSMILA--------------------------PR--FSSNGKRALISVQKDEAMDIYSV 287
             ++ +A                          PR  +  + K      Q   + D + +
Sbjct: 280 KNNVDIALAVVTLKDKAINWVSLREENSKDIYLPRVDWLPDSKHLSFQWQ---SRDQHQL 336

Query: 288 DLQSNATERLTNTL-----------FINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           DLQ  A + LT               +N    +    S  ++ S+R+G   LY+    G 
Sbjct: 337 DLQLVALDALTKPKTLVKERSDAWVNLNNDLHFLKQQSAFIWASERDGFNHLYLFDLKGK 396

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQA 394
            + ++++ + A             + FT          +  +   G +   + + + +  
Sbjct: 397 LKTQLTKGEWAVDELEYIDETAGWVYFTGRKDTPIEKQLYRVPLAGGKVERVSKQAGMHN 456

Query: 395 PTWSPSGRSLI 405
           P ++   +S+ 
Sbjct: 457 PVFA-DNQSVY 466



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 87/303 (28%), Gaps = 93/303 (30%)

Query: 220 SPNQQKVAYA--TYDDEDILRVYLMDTRID-----------------------RAPKRIG 254
           SP+  +V Y     D++    ++ MD +                         R  +RI 
Sbjct: 73  SPDGLRVTYLAGRKDNQSFYDLWQMDVKTGESSLLLNADKLASNELSDEEKARRERQRIY 132

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               M     ++ + +  LI      A ++Y   L   +  +L         A  SP  +
Sbjct: 133 GEGIMEYF--WADDSQALLI----PAAGNLYYFSLVDKSVTQLPIDEGFATDARLSPKGN 186

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQG 358
            + F  D    + LYV+       + ++ D   +  + +                W+P  
Sbjct: 187 FVSFVRD----QNLYVLDLATKKLQAMTTDGGGAIKNAMAEFVAQEEMDRMTGYWWAPDE 242

Query: 359 DLIAFTKFSG------EKFAIGV---------MKKDGSQ------ERLLVEDSNLQAPT- 396
             IAFT+          +  I               G          + ++D  +   + 
Sbjct: 243 SAIAFTRIDESAVEQVTRNEIYADGIKLTEQRYPAAGKNNVDIALAVVTLKDKAINWVSL 302

Query: 397 --------------WSPSGRSLIF--SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                         W P  + L F    +       +L ++D   + +TL+         
Sbjct: 303 REENSKDIYLPRVDWLPDSKHLSFQWQSRDQHQLDLQLVALDALTKPKTLVK----ERSD 358

Query: 441 QWV 443
            WV
Sbjct: 359 AWV 361


>gi|67971632|dbj|BAE02158.1| unnamed protein product [Macaca fascicularis]
          Length = 510

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 90/268 (33%), Gaps = 15/268 (5%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL-CVMDRD 199
           G            IA   +D   +  +       S       S++     + L  +MD  
Sbjct: 182 GLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEK 241

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            A+   +       ++   FSP++  +  ++ D    +R++ + T       +  N+   
Sbjct: 242 TASELKILYGHSGPVYGASFSPDRNYLLSSSED--GTVRLWSLQTFTCLVGYKGHNYP-- 297

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G    +S   D    +++ D       R+      +++ + + P+S+ +  
Sbjct: 298 VWDTQFSPYG-YYFVSGGHDRVARLWATDHY--QPLRIFAGHLADVNCTRFHPNSNYVAT 354

Query: 319 ES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S DR     + +      +  RI    +       +SP G  +A T  +  +  +  + 
Sbjct: 355 GSADRT----VRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA-TGATDGRVLLWDIG 409

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                  L      + +  +S  G  L 
Sbjct: 410 HGLMVGELKGHTDTVCSLRFSRDGEILA 437



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN----SRILFVSE 182
            + +WD     Q     ++       ++A   + D YQ +    G       +R    S 
Sbjct: 295 NYPVWDT----QFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSN 350

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            V +G    ++ + D    N   +       +    FSPN + +A    D     RV L 
Sbjct: 351 YVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDG----RVLLW 406

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           D         +      + + RFS +G   L S   D  + ++
Sbjct: 407 DIGHGLMVGELKGHTDTVCSLRFSRDG-EILASGSMDNTVRLW 448


>gi|87306660|ref|ZP_01088807.1| WD-40 repeat protein [Blastopirellula marina DSM 3645]
 gi|87290839|gb|EAQ82726.1| WD-40 repeat protein [Blastopirellula marina DSM 3645]
          Length = 1070

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 72/235 (30%), Gaps = 31/235 (13%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            +     P+F+ +     +     ++    +L   R+    K        +    +S +G
Sbjct: 174 NESYSLHPKFAEHPSHFVFFEESSKNFSAFHLPTQRLVGELKFDEYGLRNV---EYSPDG 230

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------SDR- 322
           +   +S  +++      V + S  T +L +        S++PD +  +        SDR 
Sbjct: 231 RYLAVSA-RNKDTHQMEVQVWSFVTGKLVH--------SFAPDGTTRLITAVRFAGSDRI 281

Query: 323 ----EGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGVM 376
                G   +     + G      S     +      SP G   A F+        I + 
Sbjct: 282 VIACSGDRLISCFDIATGRKISEASLPLFTNDESLAISPGGSYAAIFSSLDKNARLIDLR 341

Query: 377 K-----KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                   G +  L    S  Q  ++SP G  L+      G      + +    R
Sbjct: 342 NGVEAGVVGGKSELPASSSLKQI-SFSPDGEELLVYSTAGGGRHLATWDMSSGKR 395


>gi|229819064|ref|YP_002880590.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Beutenbergia cavernae DSM 12333]
 gi|229564977|gb|ACQ78828.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Beutenbergia cavernae DSM 12333]
          Length = 614

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/238 (13%), Positives = 74/238 (31%), Gaps = 22/238 (9%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSP---NQQKVAYA 229
           ++ ++ +  S        ++ V+  D G  +  L     Q L+   F+P   + + +   
Sbjct: 182 DANLVAIEHSERGDNRHPAIRVVRADDGGRVTELDDGPGQGLWAMDFAPVHGDPRLLVLH 241

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                    V+ + T + R  +        I    +  +G+  L++V  D    +Y  DL
Sbjct: 242 ERAGRPKPLVWDVATGLQRPIEI--GIDGEIADADWFPDGRALLVAVDHDARTRLYRYDL 299

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEAS 348
                  ++         +  PD   + F        + +   +++ +    I      S
Sbjct: 300 SDGTLTPVSPESGTVAGGTARPDGD-VWFSWSSAATPRTILSARTDRAVLTPIGAPAPPS 358

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV------EDSNLQAPTWSPS 400
                    G         G +    + +  G  E L V        +   + +++P 
Sbjct: 359 VPVEDVCLDG--------PGGRIHALLRRPAGGVEPLPVIVEVHGGPTWHDSDSFAPD 408



 Score = 36.5 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 38/252 (15%), Positives = 80/252 (31%), Gaps = 37/252 (14%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T  R          P  + + +   D  D   V+          +R      + L   +S
Sbjct: 68  TTDRPHGTVTATIDPRGEWIWWFDDDGGDEFGVWRRQPFASGPRRR--TETPLPLTAAYS 125

Query: 267 SN---GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI--NISASY------------ 309
           +    G+   + V + +       D       +L        + +               
Sbjct: 126 AGLLLGEDKTVVVGRSD-------DAYGTQIHQLVVGPAGAGDTAPVLLYAHAQDASAAA 178

Query: 310 -SPDSSQIVFE-SDREGK--EQLYVMQSN-GSDQKRISQDKEASYFDPVWSP---QGDLI 361
            S D++ +  E S+R       + V++++ G     +        +   ++P      L+
Sbjct: 179 LSRDANLVAIEHSERGDNRHPAIRVVRADDGGRVTELDDGPGQGLWAMDFAPVHGDPRLL 238

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              + +G    +      G Q  + +  D  +    W P GR+L+ +   D  T  +LY 
Sbjct: 239 VLHERAGRPKPLVWDVATGLQRPIEIGIDGEIADADWFPDGRALLVAVDHDART--RLYR 296

Query: 421 IDLNGRNETLIN 432
            DL+    T ++
Sbjct: 297 YDLSDGTLTPVS 308


>gi|115903823|ref|XP_787226.2| PREDICTED: similar to platelet-activating factor acetylhydrolase
           45K chain - bovine [Strongylocentrotus purpuratus]
 gi|115949006|ref|XP_001177192.1| PREDICTED: similar to platelet-activating factor acetylhydrolase
           45K chain - bovine [Strongylocentrotus purpuratus]
          Length = 407

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/251 (14%), Positives = 78/251 (31%), Gaps = 29/251 (11%)

Query: 175 SRILF--VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +R++F  V   +VS     ++ V D +  +           + +  F    + +A  + D
Sbjct: 110 TRVIFHPVYNVMVSSSEDATIKVWDYESGDFERTMKGHTDSVQDICFDHAGKMLASCSAD 169

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 + L D       K +      + +  F S+G   + S  +D+ +  + V     
Sbjct: 170 M----TIKLWDFTTFECMKTLHGHDHNVSSISFLSSGDHLV-SSSRDKTIKQWEVS-TGY 223

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             +  T           SPD S +   S+    + L V      + K   ++ +      
Sbjct: 224 CVKTFTGHREWVRMVRPSPDGSLLASASN---DQTLRVWVVATKECKLELREHDHVVECV 280

Query: 353 VWSP------------------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            W+P                  +      +    +   I  +        L   D+ ++ 
Sbjct: 281 AWAPETAYPTLNEIKGVEKKGARSTPFLVSGSRDKAIKIWDVSAGACIMTLTGHDNWVRG 340

Query: 395 PTWSPSGRSLI 405
             + P G+ +I
Sbjct: 341 AVFHPGGKFII 351


>gi|19113878|ref|NP_592966.1| U4/U6 x U5 tri-snRNP complex subunit Prp4 family (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74698446|sp|Q9UTC7|YIDC_SCHPO RecName: Full=Uncharacterized WD repeat-containing protein C227.12
 gi|6455915|emb|CAB61461.1| U4/U6 x U5 tri-snRNP complex subunit Prp4 family (predicted)
           [Schizosaccharomyces pombe]
          Length = 462

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 72/214 (33%), Gaps = 17/214 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRID-----RAPKRIGNFRSMILAPRFSSNGKRA 272
           RFS N    A  ++     ++V+  D   +         R+       L   + ++ ++ 
Sbjct: 179 RFSNNGNHFASGSW--GGQVKVWNSDNLSEVQLFRGHTDRVSGLDWYPLCQAWDADSEQL 236

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            ++    +         QS    RL   L      ++ P    +V  S  +   +L+   
Sbjct: 237 TLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASF-DTTWRLW--D 293

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLLVED- 389
            +   +  + +      F     P G L+     SG   AIG +   + G    +L E  
Sbjct: 294 VHTGVELLMQEGHSEGIFSIACQPDGSLV----SSGGNDAIGRIWDLRSGKSIMVLDEHI 349

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             + A  WSP+G  L  S   D      L  + L
Sbjct: 350 RQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSL 383


>gi|325095853|gb|EGC49163.1| WD40 repeat-containing protein [Ajellomyces capsulatus H88]
          Length = 515

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 58/139 (41%), Gaps = 9/139 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           ++E +VS     ++ + D   +N          + +    FSP+   +A A++D+     
Sbjct: 370 ITERLVSASDDFTMFLWDPATSNKPVARLLGHQKEVNHVTFSPDGAYIASASFDN----H 425

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
           V L + R  +    +      +    FS++  R L+S  KD  + ++  D+++      L
Sbjct: 426 VKLWNARDGKFISSLRGHVGAVYQCCFSAD-SRLLVSSSKDTTLKVW--DVRTGKLFMDL 482

Query: 298 TNTLFINISASYSPDSSQI 316
              L    +  +SPD  ++
Sbjct: 483 PGHLDEVYAVDWSPDGEKV 501



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 40/139 (28%), Gaps = 6/139 (4%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            K+        D   ++L D      P  R+   +  +    FS +G     S   D  +
Sbjct: 368 NKITERLVSASDDFTMFLWDPATSNKPVARLLGHQKEVNHVTFSPDGAYIA-SASFDNHV 426

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +++          L   +       +S DS  +V  S       L V            
Sbjct: 427 KLWNA-RDGKFISSLRGHVGAVYQCCFSADSRLLVSSSK---DTTLKVWDVRTGKLFMDL 482

Query: 343 QDKEASYFDPVWSPQGDLI 361
                  +   WSP G+ +
Sbjct: 483 PGHLDEVYAVDWSPDGEKV 501



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 40/132 (30%), Gaps = 4/132 (3%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++     +    RL          ++SPD + I   S       + +  
Sbjct: 374 LVSASDDFTMFLWDPATSNKPVARLLGHQKEVNHVTFSPDGAYIASASF---DNHVKLWN 430

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +         +    + +   +S    L+  +        +  ++       L      +
Sbjct: 431 ARDGKFISSLRGHVGAVYQCCFSADSRLLV-SSSKDTTLKVWDVRTGKLFMDLPGHLDEV 489

Query: 393 QAPTWSPSGRSL 404
            A  WSP G  +
Sbjct: 490 YAVDWSPDGEKV 501


>gi|319794731|ref|YP_004156371.1| 40-residue yvtn family beta-propeller repeat protein [Variovorax
           paradoxus EPS]
 gi|315597194|gb|ADU38260.1| 40-residue YVTN family beta-propeller repeat protein [Variovorax
           paradoxus EPS]
          Length = 485

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/146 (14%), Positives = 46/146 (31%), Gaps = 8/146 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A  +     +  +    T   +    +G          F+ +GK   ++V+ 
Sbjct: 93  FSPDHRTLAVVSIGSNSVTFIDT-ATNAVKHTTYVGRSPHEAF---FTPDGKEVWVTVR- 147

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                +  +D  +   +    T        +SPD       S      +  V+ +     
Sbjct: 148 -GENYVSVIDAATFEEKTRIVTPAGPGMQIFSPDGKYGYVCSSF--NPETVVIDTATKQI 204

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFT 364
               +       +   +P G  + FT
Sbjct: 205 VGRVKQDSPFCPNIAATPDGRQVWFT 230



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 71/222 (31%), Gaps = 23/222 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+ ++V + T   E+ + V    T  ++          M +   FS +GK   +    
Sbjct: 135 FTPDGKEV-WVTVRGENYVSVIDAATFEEKTRIVTPAGPGMQI---FSPDGKYGYVCSS- 189

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASY-----SPDSSQIVFESDREGKEQLYVMQS 333
               +   +D  +              S        +PD  Q+ F     G+  ++  + 
Sbjct: 190 -FNPETVVIDTATKQIV----GRVKQDSPFCPNIAATPDGRQVWFTLKDVGRTMVFDAKP 244

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             +  K        ++ +   + +G   A+    G    + V + D   +   +    L 
Sbjct: 245 PFAVLKSFDTGAITNHVNFAATKKGTF-AYVTV-GGLNQVKVFRTDDFSQVATIPVGKLP 302

Query: 394 APTW-SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              W S  G  +        +    L  ID  G N+ +   P
Sbjct: 303 HGIWPSGDGSRIY----VGLENADALAVID-TGTNKVVGEVP 339


>gi|118381288|ref|XP_001023805.1| hypothetical protein TTHERM_00245770 [Tetrahymena thermophila]
 gi|89305572|gb|EAS03560.1| hypothetical protein TTHERM_00245770 [Tetrahymena thermophila SB210]
          Length = 2372

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 84/214 (39%), Gaps = 20/214 (9%)

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            FSPN + +      D++  +++  +  +    +++  F   I +  FS +G   +I+   
Sbjct: 1432 FSPNDKLLVTI---DDNTCKIWNFEKEMQLIQEQV--FEDNIDSVAFSPDGALLVIATIG 1486

Query: 279  DEAMDIYS-----VDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYV 330
               ++        +DL      +  +    ++     ++S D   +   S       ++ 
Sbjct: 1487 IYELNCNIYKTEKLDLLHKKLTQECDQEDASVDHLKVAFSYDGRYLA-ASSAYSPCAVFD 1545

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            ++++      I  D   +     +SP G  +A  +   +   + V      +   +V++S
Sbjct: 1546 VKNDFQILDGIQIDG-GNASSLAFSPDGKYLAVGQGEEDCLILKVQ--QNFELLKIVQNS 1602

Query: 391  NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            N    ++S   R LI + +   +   K++S++ +
Sbjct: 1603 NASNLSFSADSRYLITASQ---NINCKIWSVEKD 1633



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 79/255 (30%), Gaps = 58/255 (22%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-- 275
             FS + + +A ++      +     D +I    +  G       +  FS +GK   +   
Sbjct: 1524 AFSYDGRYLAASSAYSPCAVFDVKNDFQILDGIQIDG---GNASSLAFSPDGKYLAVGQG 1580

Query: 276  -----------------VQKDEAMDIYSVDLQSNATERLTNTLFIN-------------- 304
                             + ++      S    S     +T +  IN              
Sbjct: 1581 EEDCLILKVQQNFELLKIVQNSNASNLSFSADSRYL--ITASQNINCKIWSVEKDFEMIN 1638

Query: 305  ------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                   + ++  D+      S  +G  Q++ +         I Q      +  V+SP  
Sbjct: 1639 KIDLKVRNGTFKSDNKYFA-TSCSDGTFQIWNISVRFERINSI-QGHVGKIYQAVFSPDN 1696

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
              +A T  S     I     + S E    L+     + + ++S  G+ L  +        
Sbjct: 1697 KYLA-TASSDMTCKIW--NVENSFELLYTLIGHQQEVYSVSFSSDGQLLATASD------ 1747

Query: 416  SKLYSIDLNGRNETL 430
             K+Y+I  N +NE L
Sbjct: 1748 DKVYNIWNNTKNEDL 1762


>gi|302656466|ref|XP_003019986.1| hypothetical protein TRV_05955 [Trichophyton verrucosum HKI 0517]
 gi|291183764|gb|EFE39362.1| hypothetical protein TRV_05955 [Trichophyton verrucosum HKI 0517]
          Length = 931

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 85/211 (40%), Gaps = 22/211 (10%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +A+ +     +L V+   +      K+ G+  SM  A  +S +G++  I+   D  + 
Sbjct: 326 EWLAFGSSKLGQLL-VWEWQSE-SYILKQQGHLDSMN-ALVYSPDGRKI-ITAADDGKIK 381

Query: 284 IYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++  D+++       T       +  ++   + ++F +  +G  + + +     + K  +
Sbjct: 382 VW--DIKTGFCIVTFTEHKSGVTACEFTKRGN-VLFTASLDGSVRAWDL-VRYRNFKTFT 437

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWS 398
                S+      P G+++         F I +        +LL + S  + P    ++S
Sbjct: 438 APSRLSFSSLAVDPSGEIVCAGSLD--SFDIHIWSVQTG--QLLDQLSGHEGPVSSLSFS 493

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             G  ++ +     D   +++SI   GR++T
Sbjct: 494 ADGSHVVSASW---DRTVRIWSIF--GRSQT 519



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 67/197 (34%), Gaps = 13/197 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ +K+  A  D +    + + D +           +S + A  F+  G   L +   
Sbjct: 364 YSPDGRKIITAADDGK----IKVWDIKTGFCIVTFTEHKSGVTACEFTKRGN-VLFTASL 418

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++    +  T    ++ S S + D S  +  +       +++        
Sbjct: 419 DGSVRAWDL-VRYRNFKTFTAPSRLSFS-SLAVDPSGEIVCAGSLDSFDIHIWSVQTGQL 476

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLLVEDSNLQAPT 396
                  E       +S  G  +    +      I  +  +   S+   L   S++    
Sbjct: 477 LDQLSGHEGPVSSLSFSADGSHVVSASWD-RTVRIWSIFGRSQTSEPLQL--QSDVLCVA 533

Query: 397 WSPSGRSLIFSRKKDGD 413
           + P G+ +  +   DG 
Sbjct: 534 FRPDGKQIA-ASTLDGQ 549



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 5/81 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  +    FS +   V  A++D      V +               +S +L   F 
Sbjct: 480 LSGHEGPVSSLSFSADGSHVVSASWDR----TVRIWSIFGRSQTSEPLQLQSDVLCVAFR 535

Query: 267 SNGKRALISVQKDEAMDIYSV 287
            +GK+   +   D  +  +SV
Sbjct: 536 PDGKQIA-ASTLDGQLTFWSV 555



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 61/167 (36%), Gaps = 24/167 (14%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D   +++   +  +   ++      + +  FS++G   ++S   D  + I+S+  +S  +
Sbjct: 462 DSFDIHIWSVQTGQLLDQLSGHEGPVSSLSFSADGSH-VVSASWDRTVRIWSIFGRSQTS 520

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM-----------QSNGSDQKRISQ 343
           E L       +  ++ PD  QI   S  +G+   + +           + + S  ++I+ 
Sbjct: 521 EPL-QLQSDVLCVAFRPDGKQIA-ASTLDGQLTFWSVEDAVQQSGIDGRRDVSGGRKITD 578

Query: 344 DKEA-------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            + A       S+    +S  G  +      G    I +     S  
Sbjct: 579 RRTAANSAGTKSFSTITYSGDGTCLL---AGGNSKYICLYDVGTSSL 622


>gi|328718780|ref|XP_001949746.2| PREDICTED: probable elongator complex protein 2-like [Acyrthosiphon
           pisum]
          Length = 829

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 48/156 (30%), Gaps = 21/156 (13%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--------GKRALISVQK 278
            +     +    +Y++          I      I    +  N         K  L+SV  
Sbjct: 273 TFNVTKQDGSDCIYMIQLET-----VISGHDGWIYGVHWKPNYFTDYISEKKMELLSVSM 327

Query: 279 DEAMDIYSVDLQSN---ATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQ 332
           D+ + +++ D  S       RL              +SPD + I+ +    G   L+   
Sbjct: 328 DKTLAVWAYDEDSGLWVDIIRLGEVGGNTLGFYGGKFSPDGNSILAQ-GHNGSFHLWTKN 386

Query: 333 SNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFS 367
            NGS    ++      S  D  W P+G  I      
Sbjct: 387 KNGSWTPGVTIGGHFGSVEDIAWDPEGKYIVSVSSD 422



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 43/99 (43%), Gaps = 9/99 (9%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + +T   +  +++ +    +    FS +  R L+SV +D    ++  D+++N+   +
Sbjct: 604 SIIIWNTENFQQIQKLISHNLTVTQLAFSPD-SRNLLSVSRDRTWSLFEYDIKTNSFIII 662

Query: 298 T---NTLFINIS----ASYSPDSSQIVFESDREGKEQLY 329
           +       I+       +++ DS        R+GK  ++
Sbjct: 663 SKSDKHTGIHTRIIWCCAWTHDSVYFA-TGSRDGKLVIW 700


>gi|302142245|emb|CBI19448.3| unnamed protein product [Vitis vinifera]
          Length = 547

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 52/155 (33%), Gaps = 17/155 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG-------- 269
           R+SP    +A  + D      + +     +   + + + +  +    +S  G        
Sbjct: 389 RWSPTGTLLASCSDDT----SIKIWSMNHNSFVRDLRSHKREVYCIEWSPTGPTTDNPNL 444

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              L S   D  ++++ V+ + N    LT    I  +  +SP+   +   S       LY
Sbjct: 445 TLLLASSSFDNTINVWDVE-RGNPIYGLTRHRNIIYTIEFSPNGEYLASGSLDNW---LY 500

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           V         + S        D  W+   D IA +
Sbjct: 501 VWSVKEGRLIK-SYYGGGGVTDISWNKSSDKIAVS 534


>gi|56696669|ref|YP_167030.1| WD domain/cytochrome c family protein [Ruegeria pomeroyi DSS-3]
 gi|56678406|gb|AAV95072.1| WD domain/cytochrome c family protein [Ruegeria pomeroyi DSS-3]
          Length = 449

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 56/163 (34%), Gaps = 17/163 (10%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            RAP+ +     +  A  FS +G   L S   D  + ++ V    +   ++T   F    
Sbjct: 156 SRAPRSLDAASGVN-AVAFSPDGT-LLYSAGMDGVLRLWDV-ASGSELRQITRHGFGINE 212

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              +     + + +  +G  ++  +      ++  + D+         SP    +A    
Sbjct: 213 IVLNDADGWLAYGA-VDGVTRI--LDLATGAERDFTLDRR-PVLALALSPDRSQLAVGDG 268

Query: 367 SGEKFAIGVMKKDGSQERL-----LVEDSNLQAPTWSPSGRSL 404
            G      +M  D +  R+           + A  +SP G ++
Sbjct: 269 EG-----YIMVIDTASWRIARDFRATLRGPVWALAFSPDGANI 306


>gi|332376795|gb|AEE63537.1| unknown [Dendroctonus ponderosae]
          Length = 340

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 44/288 (15%), Positives = 85/288 (29%), Gaps = 57/288 (19%)

Query: 119 EGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
               +  +        RLWDV+    I  + F    +    +A +  +            
Sbjct: 83  SSNSKYVISASWDSTIRLWDVEKGNTI--RTFKGHTSDVNSVALSPDN------------ 128

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYAT 230
                      +VSG    ++ + +  G   +Y  P      +    RFSP Q++    +
Sbjct: 129 ---------RQIVSGSRDKTIKLWNTVGE-CKYTFPDSSSQDWISCTRFSPLQKETLIVS 178

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              +  +RV+  +        ++G     +     S +G     S  KD    ++ V+ +
Sbjct: 179 GGWDKKVRVW--NLEKCSMKTQLGGHTGAVYTITISPDGSLCA-SGGKDGVAMLWDVN-E 234

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDRE----------------GKEQLYVMQSN 334
                 +     IN    +SP    +   +D                   K +       
Sbjct: 235 GRHLYSIAAQSAINC-LCFSPSHYWLCAATDDSIKIWNLEEGKAVVVNLTKPRTSTYDEE 293

Query: 335 GS--DQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           G     KR+ +     +     WS  G  I +   +  K  +    KD
Sbjct: 294 GKLISTKRLPKASGVPWCVSLTWSADGR-ILYAGATDGKIHVYEFSKD 340


>gi|318040516|ref|ZP_07972472.1| dipeptidyl aminopeptidase family protein [Synechococcus sp. CB0101]
          Length = 642

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 70/200 (35%), Gaps = 31/200 (15%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YSPDSSQIVFESDREGK 325
           A+     D  + +  +D   +   RLT         +        P   + +   + +G+
Sbjct: 92  AVFVHDSDRCLWLLPLDAPGSTPRRLTTPSDNGRFPAALGGGVIDPRHDRWIGVMEADGR 151

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-----EKFAIGV--MKK 378
           + L  +   G   + +    +     P  SP G+ +A+ ++       E+  + +  +  
Sbjct: 152 DTLVAVALTGGAPQPLHAPAD-FCGYPSLSPAGNQLAWVEWQQPCMPWERSQVWLAPVDP 210

Query: 379 DGS--QERLL--VEDSNLQA-----PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG---- 425
           DGS    R +      + +A     P W+  G  L+ S  + G    + +          
Sbjct: 211 DGSLASPRPVAGSAPGDAEACSVFQPLWA--GDQLVVSNDRSGFWNLECWRQAAQASASA 268

Query: 426 --RNETLINTPAYASDPQWV 443
             + E L+   A  + PQWV
Sbjct: 269 APKWEPLLPMEADYAMPQWV 288


>gi|281350260|gb|EFB25844.1| hypothetical protein PANDA_012132 [Ailuropoda melanoleuca]
          Length = 292

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 100 AFSPDSQYLATGTHVGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 154

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++SPDS  +V  SD      + +     ++
Sbjct: 155 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASD---DGYIKIYDVQHAN 210

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 211 LAGTLSGHASWVLNVAFCPD 230



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 91/284 (32%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQI  K   + P     +A 
Sbjct: 44  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQI--KSIDAGPVDAWTLA- 100

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 101 -FSPDSQYLAT---GTHVGKVNI--FGVESGKKEYSL--------------DTRGKFILS 140

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 141 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSPD-SQLLVTA 195

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L+      ++ ++ PD +           + + V   
Sbjct: 196 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTHF---VSSSSDKSVKVWDV 248

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I V  
Sbjct: 249 GTRTCVHTFFDHQDQVWGVKYNGNGSKIVSV---GDDQEIHVYD 289


>gi|115465207|ref|NP_001056203.1| Os05g0543300 [Oryza sativa Japonica Group]
 gi|52353429|gb|AAU43997.1| unknown protein [Oryza sativa Japonica Group]
 gi|113579754|dbj|BAF18117.1| Os05g0543300 [Oryza sativa Japonica Group]
 gi|215737120|dbj|BAG96049.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218197201|gb|EEC79628.1| hypothetical protein OsI_20843 [Oryza sativa Indica Group]
          Length = 320

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 72/183 (39%), Gaps = 15/183 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V++S +SG + +S+ + D      + +   R +    P  + +QQ + +A   +   +++
Sbjct: 126 VNDSFMSGSLDHSVRIWDLRVNACQGILRLRGR----PSVAYDQQGLVFAVAMEGGAIKL 181

Query: 240 YLMDTRIDRA--PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-- 295
           +   +          +G   + +   +FS++GK  L++   +    IY +D         
Sbjct: 182 FDSRSYDKGPFDTFLVGGDTAEVSDIKFSNDGKSMLLTTTNN---HIYVLDAYGGDKRCG 238

Query: 296 -RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             L ++  +   A+++PD   ++  S   G   L+    N   +               W
Sbjct: 239 FSLESSPNVATEAAFTPDGQYVISGS---GDGTLHAWNINTIQEIACWNSHIGPITALKW 295

Query: 355 SPQ 357
           +P+
Sbjct: 296 APR 298


>gi|126453030|ref|YP_001065470.1| hypothetical protein BURPS1106A_1191 [Burkholderia pseudomallei
           1106a]
 gi|126226672|gb|ABN90212.1| conserved hypothetical protein [Burkholderia pseudomallei 1106a]
          Length = 391

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 52/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D L V +R +D    +        +   S+ 
Sbjct: 13  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGLYV-YR-FDTDSGRVSPVSSAKAENPSYL 70

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 71  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 128

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 129 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 188

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 189 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 222

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    I  +       
Sbjct: 223 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLAHIETVPMTAPGF 282

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 283 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 327


>gi|83721002|ref|YP_441529.1| hypothetical protein BTH_I0975 [Burkholderia thailandensis E264]
 gi|83654827|gb|ABC38890.1| conserved hypothetical protein [Burkholderia thailandensis E264]
          Length = 411

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 61/381 (16%), Positives = 110/381 (28%), Gaps = 75/381 (19%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D + V +R +D    +        +   S+ 
Sbjct: 33  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYV-YR-FDTDSGRATPVSSAKTENPSYL 90

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +  +G +  YL+ 
Sbjct: 91  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSSEGNDPCYLSL 148

Query: 209 SRDQILFEPR-FS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D        +S    P      +       +    L        P +     + + + 
Sbjct: 149 SPDGRYLVAANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGSGPVKGRQDGAHVHST 208

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q      +YS                      Y+PD S+ +      
Sbjct: 209 VFSPDGKYLFV--QDLGVDKLYSY--------------------RYTPDGSRGL----IG 242

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +           V+S  G     T        +     DG   
Sbjct: 243 PTESRYTLVKAGSGPRHL-----------VFSANGRFAYVTSELNASVDVYRYD-DGRLA 290

Query: 384 RLLVEDSNLQAPTW-----------SPSGRSLIFSRKKDGDTGSKLYSIDLN-------G 425
            +  E   + AP +           SP GR L ++  +       +Y+++         G
Sbjct: 291 HV--ETVPMTAPGFAGKVGGGALHLSPDGRFL-YATNRGDANDIVIYAVNAADGKLKLVG 347

Query: 426 RNETLINTPA-YASDPQ--WV 443
           R  +L  TP  +A DP   W+
Sbjct: 348 RQSSLGKTPREFAIDPSGKWL 368


>gi|88860654|ref|ZP_01135291.1| putative transcriptional regulator [Pseudoalteromonas tunicata D2]
 gi|88817249|gb|EAR27067.1| putative transcriptional regulator [Pseudoalteromonas tunicata D2]
          Length = 722

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 66/213 (30%), Gaps = 23/213 (10%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQK-DEAMDIY 285
           +    +  R++  D +     + I +  S      +   S +G           E   I+
Sbjct: 330 SESIAEPYRIFKHDLQTG-YERNITSPPSTGRGDYSFALSPDGLSLAFVRNVLWEKSSIW 388

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            ++L +  T +L    ++  S ++       +  S      +  +        KR S+  
Sbjct: 389 LLNLANGETRQLFEIPYLLESIAWM--GDHAILYSTGHDLMRFNLASKESELVKRFSKPV 446

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSL 404
           +              I  ++       I  +     + ER++  D    AP  S  G   
Sbjct: 447 KYPNT------DESNIYVSRGQSLVSDIWQLNLQRLTTERIIASDYIDSAPIISAQGT-- 498

Query: 405 IFSRKKDGD-------TGSKLYSIDLNGRNETL 430
           +F   + G           ++  +DL G  E +
Sbjct: 499 LFLSNRSGHHELWQRGGNQEIKVMDLIGELEKV 531



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 64/191 (33%), Gaps = 28/191 (14%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           PS  +  +    SP+   +A+      +   ++L++   +   +++     ++ +  +  
Sbjct: 356 PSTGRGDYSFALSPDGLSLAFVRNVLWEKSSIWLLNL-ANGETRQLFEIPYLLESIAWMG 414

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNA---TERLT---NTLFINISASYSPDSSQIVFESD 321
           +    L S       D+   +L S      +R +        + S  Y      +V  SD
Sbjct: 415 D-HAILYST----GHDLMRFNLASKESELVKRFSKPVKYPNTDESNIYVSRGQSLV--SD 467

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------FSGEKFAIG 374
                 ++ +       +RI    +     P+ S QG L    +         G    I 
Sbjct: 468 ------IWQLNLQRLTTERII-ASDYIDSAPIISAQGTLFLSNRSGHHELWQRGGNQEIK 520

Query: 375 VMKKDGSQERL 385
           VM   G  E++
Sbjct: 521 VMDLIGELEKV 531


>gi|154282437|ref|XP_001542014.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150410194|gb|EDN05582.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 460

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 67/215 (31%), Gaps = 12/215 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R+  P    I     FSP+ Q++ YA+ +   +  V+  +   +       NF  +  A
Sbjct: 59  LRWSKPPGPSIAEPDAFSPDSQRILYASGNYISVWDVHDENWCAEIEAGDTFNFTYVDFA 118

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESD 321
                  +    S   +  + +    L +     + +  F N +   + P +  +     
Sbjct: 119 ATHD---EVIAFS---EFNVHLTIFSLSTGGQRVIKSPKFSNATGYGFRPATGHLALLLK 172

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +  + L + +    +                WSP G  +     +     + +   DG 
Sbjct: 173 LDANDTLTIHEPETYEAITTVTLNTVDAQGLKWSPNGAWLGVWDSASTTPRVEIYTADGQ 232

Query: 382 QERLLVEDSNLQA-----PTWSPSGRSLIFSRKKD 411
             R   E +N          WSP  + L   R   
Sbjct: 233 YYRTYSEAANDSNLGVKTIEWSPDSQLLAIGRHDG 267



 Score = 36.9 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 67/211 (31%), Gaps = 22/211 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P  Q +       ++ +   +   R  + P       S+     FS + +R L +   
Sbjct: 35  FAPEGQNIVR-NIALKESITGCVKALRWSKPP-----GPSIAEPDAFSPDSQRILYASGN 88

Query: 279 -----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                D   + +  ++++  T   T   F             I F    E    L +   
Sbjct: 89  YISVWDVHDENWCAEIEAGDTFNFTYVDFAATH------DEVIAFS---EFNVHLTIFSL 139

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVEDSN 391
           +   Q+ I   K ++     + P    +A          + + + +   +   + +   +
Sbjct: 140 STGGQRVIKSPKFSNATGYGFRPATGHLALLLKLDANDTLTIHEPETYEAITTVTLNTVD 199

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            Q   WSP+G  L            ++Y+ D
Sbjct: 200 AQGLKWSPNGAWLGVWDSASTTPRVEIYTAD 230


>gi|116624042|ref|YP_826198.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227204|gb|ABJ85913.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 751

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 86/286 (30%), Gaps = 50/286 (17%)

Query: 141 GKKFFSSPASWRKIA----HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM 196
           G+   ++  S R       H  +D  Y +                        ++ L + 
Sbjct: 47  GRWLAATSGSLRDRIGIDNHRFADPTYIA---------------------PNHQDLLVID 85

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI--G 254
            + GA+ +     R        +SP+  ++A      E  + V        +    +  G
Sbjct: 86  TQSGASRKVFADRRQVTAL--AWSPDGARLAMLALSGETYVPVIWDRASGQQIAVPLPAG 143

Query: 255 NFRSMILAPRFSSNGKRALISVQK-----------DEAMDIYSVDLQSNATERLTNTLFI 303
              +     R+S +G R LI+++             +      V   S         L  
Sbjct: 144 KIAAENAELRWSGDGARLLINLRPAEWRAKAAERFRQETQGMVVFHSSKEP-----FLAW 198

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +     S + S   FE  + GK    +  +     + +++D  A  +    S       +
Sbjct: 199 DDVRRMSLEKSLAAFEV-KTGKWTELIANAKLGAYE-LTEDGAALTYQ---SDNTKKTDY 253

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               G    +  M   G    +L++ +      WS  GR   +S+ 
Sbjct: 254 DVIGGTDNELRTMPAAGGNSTVLLKSTKGLTLIWSRDGRRYAYSKD 299



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 67/232 (28%), Gaps = 42/232 (18%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD------------- 233
           G   N L  M   G N   L  S   +     +S + ++ AY+                 
Sbjct: 257 GGTDNELRTMPAAGGNSTVLLKSTKGLTLI--WSRDGRRYAYSKDGVVMLGGIEGGEAKP 314

Query: 234 ---EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                               ++    +    A R S  G   L +  K+    ++ VD  
Sbjct: 315 VAGAKPPAPDKDKPEEPTDAEKEKRAKERFTAVRLSPKGDFLL-ASNKEG---LWMVDTA 370

Query: 291 SNATERLTNTLFINI------SAS-----YSPDSSQIV--FESDREGKEQLYVMQSNGSD 337
           S+     T  LFI +      +       ++ + S +   + S    +  L         
Sbjct: 371 SH-----TRDLFIKMPEEDKLAPRYDAVGWNAEGSVLYLSYSSRIRWERGLARYDVRSKK 425

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMKKDGSQERLLVE 388
              + +D    Y +   S  G  I FT  +G +   +  +  +    R L  
Sbjct: 426 VSELWKD-NHIYSNFRVSKDGSTIVFTAAAGNRPSDLYAVTDEMKAARRLTT 476


>gi|116619608|ref|YP_821764.1| peptidase S9B dipeptidylpeptidase IV subunit [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116222770|gb|ABJ81479.1| peptidase S9B, dipeptidylpeptidase IV domain protein [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 797

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 67/202 (33%), Gaps = 43/202 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + +++A    D   +  +YL+DT++     +   +            G   + ++Q+
Sbjct: 229 WSEDSKRIATFQQDQRGVGEMYLVDTKVGHPTLQAWKYPLP---------GDEVVTTIQR 279

Query: 279 DEAMDIYSVDLQSNATERL-----------------TNTLFINISASYSPDSSQIVFES- 320
                   VDL      RL                     + ++   +  D +++ F S 
Sbjct: 280 ------VVVDLDGPRVVRLKLPADQHRSTLCDNVACRGGEWADVQ--WDKDGAKLAFVST 331

Query: 321 DREGKEQ-LYVMQSNGSDQKRISQDKEASYFDP-------VWSPQGDLIAFTKFSGEKFA 372
            R+ KE+ L +  +     + +  +K  ++F+         + P+     +         
Sbjct: 332 SRDHKEEVLRIADATTGTVRDVLTEKVPTFFESGNGRVNWRFLPESKEFIWFSERDNWGH 391

Query: 373 IGVMKKDGSQERLLVEDSNLQA 394
           + +   D  + +  +   +   
Sbjct: 392 LYLYDADTGKLKNQITSGDWNV 413



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 36/243 (14%), Positives = 71/243 (29%), Gaps = 76/243 (31%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-----------NTLFINISAS----Y 309
            S + K A          +++  D+ +N    LT           +    + S      +
Sbjct: 174 LSPDKKHAAFIRD----SNLWVRDVATNKESPLTTDGVKDFGYATDNAGWSSSNRPVVLW 229

Query: 310 SPDSSQIV-FESDREGKEQLY------------------------------VMQSNGSDQ 338
           S DS +I  F+ D+ G  ++Y                              V+  +G   
Sbjct: 230 SEDSKRIATFQQDQRGVGEMYLVDTKVGHPTLQAWKYPLPGDEVVTTIQRVVVDLDGPRV 289

Query: 339 KRISQD--------------KEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQ 382
            R+                 +   + D  W   G  +AF  T    ++  + +       
Sbjct: 290 VRLKLPADQHRSTLCDNVACRGGEWADVQWDKDGAKLAFVSTSRDHKEEVLRIADATTGT 349

Query: 383 ER-LLVE--------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            R +L E         +      + P  +  I+  ++D      LY  D  G+ +  I +
Sbjct: 350 VRDVLTEKVPTFFESGNGRVNWRFLPESKEFIWFSERDNWGHLYLYDAD-TGKLKNQITS 408

Query: 434 PAY 436
             +
Sbjct: 409 GDW 411


>gi|323945131|gb|EGB41193.1| rhomboid family protein [Escherichia coli H120]
          Length = 591

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T            S +  K          +  +      ++ D  +++   
Sbjct: 348 ATGEIIQSITTGAHPDSLI--LSRDGTKAWVMNRTSNSVSAIDLVAYQHVADIPLEKYDG 405

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+    +   +I  ++  ++  E            +  +
Sbjct: 406 TGTSGKPGAWVMALSPDERTLLV--PGEGRGNIVRINTITHQKEDFPAGDARGTISAMRF 463

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ +     S   +      + Y     SP G  +A   +  +
Sbjct: 464 RPENGEVIFA-DSQGISRISIGDQQTSIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 520

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 521 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 569

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 570 SLDPQAIIRHPQYG 583


>gi|322692661|gb|EFY84557.1| Heterokaryon incompatibility protein [Metarhizium acridum CQMa 102]
          Length = 1610

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 80/233 (34%), Gaps = 32/233 (13%)

Query: 211  DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            D+++  PR   +  ++   T   E           +    + + N    ++A   S + +
Sbjct: 1097 DRLVSFPR---DSSRLILVTTGRELYQWNIGTREAVKMMDELVSNDMGNVVA--ISPSER 1151

Query: 271  RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLY 329
               +     +   +Y +D      ERL           ++S D S +       G  +++
Sbjct: 1152 IVAV---LGKEPYLYILDTSGR--ERLVLKESWFYGPLAFSDDGSLLAVS---TGHHKMW 1203

Query: 330  VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA------FTKFSGEK-----FAIGVMKK 378
            V  +         +  ++      +SP    +A      FT+F+ ++     +A+   ++
Sbjct: 1204 VWNTTSRTWTFQFEGHDSFVSSLAFSPDAKYLASCSPTPFTRFNKKRGYTKIWALEAPRR 1263

Query: 379  DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
                E+   E   +    +S   + +        ++   L+S   +G  E L+
Sbjct: 1264 GVGDEQ--YEGGKISDVYFSQDNKWIAAVSD---ESKVDLWS--SSGHFERLL 1309



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 50/297 (16%), Positives = 100/297 (33%), Gaps = 29/297 (9%)

Query: 141  GKKFFSSPASWRKIAHTISDDIYQSITGEKGD--FNSRILFVSESVVSGIIKNSLCVMDR 198
            G    S+   W +I  TI+    +     K D   + R+   +   VS   +    +   
Sbjct: 938  GTWLLSTNYEWIQIIDTITGARIRRTFHPKDDVVASYRLSKDTTKFVSASARVQRNLRLL 997

Query: 199  DGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D  N  ++  P  D I     FS + + +A  +        + + DT       R     
Sbjct: 998  DVVNGSWIELPQGDDIFHRLDFSYDSKLLAGVSK-----ASIRIWDTEQGELVSRRTLES 1052

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYSPDSS 314
             +   P F  +     + +       I  ++ Q+   ER   L     I+   S+  DSS
Sbjct: 1053 EISGDPIFLGSSTMIAVQLI---DKSIEILEAQTG--ERCCGLQTGFDIDRLVSFPRDSS 1107

Query: 315  QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGEKFA 372
            +++  +      +LY       +  ++  +  ++        SP   ++A     G++  
Sbjct: 1108 RLILVTT---GRELYQWNIGTREAVKMMDELVSNDMGNVVAISPSERIVAVL---GKEPY 1161

Query: 373  IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + ++   G +  +L E        +S  G  L  S         K++  +   R  T
Sbjct: 1162 LYILDTSGRERLVLKESWFYGPLAFSDDGSLLAVSTGHH-----KMWVWNTTSRTWT 1213



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 65/175 (37%), Gaps = 15/175 (8%)

Query: 164  QSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            + +  ++  F   + F  +          + + V +       +     D  +    FSP
Sbjct: 1171 ERLVLKESWFYGPLAFSDDGSLLAVSTGHHKMWVWNTTSRTWTFQFEGHDSFVSSLAFSP 1230

Query: 222  NQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRALIS 275
            + + +A  +   +   +  R Y     ++   + +G+ +     I    FS + K    +
Sbjct: 1231 DAKYLASCSPTPFTRFNKKRGYTKIWALEAPRRGVGDEQYEGGKISDVYFSQDNKWIA-A 1289

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISAS--YSPDSSQIVFESDREGKEQL 328
            V  +  +D++S    S   ERL      +  A+  +S DS+++ F   R G   +
Sbjct: 1290 VSDESKVDLWS---SSGHFERLLRDNKRDEVATLKFSWDSTKLAFL-TRGGSVGI 1340


>gi|291392342|ref|XP_002712479.1| PREDICTED: WD repeat domain 69 [Oryctolagus cuniculus]
          Length = 368

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/256 (12%), Positives = 75/256 (29%), Gaps = 34/256 (13%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
           +        +    +LWDV++ +++                H  S +I        G   
Sbjct: 141 QSTLVATGSMDTTVKLWDVQNGEEVFTLT-----------GH--SAEIISLSFNTSG--- 184

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
                    +V+G + +++ V D D     Y        +    F+ +   +   + D  
Sbjct: 185 -------NRIVTGSLDHTVAVWDTDTGKKVYTLIGHCAEISSALFNWDSSLILTGSMDK- 236

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                 L D    +    +      IL   F S GK    +   D    +Y     +   
Sbjct: 237 ---TCMLWDATSGKCVATLTGHDEKILDSCFDSTGK-LFATSSVDGTARVY--HTATRKL 290

Query: 295 -ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             +L          S++P  + ++  S     +   +  +      ++ +      F   
Sbjct: 291 ITKLEGHEGEVSKISFNPQGNHLLTGSS---DKTARIWDAQTGQCLQVLEGHTDEIFSCA 347

Query: 354 WSPQGDLIAFTKFSGE 369
           ++ QG+++        
Sbjct: 348 FNYQGNMVITGSRDNT 363



 Score = 40.0 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 38/304 (12%), Positives = 98/304 (32%), Gaps = 37/304 (12%)

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                  +LWD    +++   +            H   + +Y         F        
Sbjct: 95  GSYDRTCKLWDTASGEELHTLE-----------GHK--NVVYAIAFNNPYGFVCLSFNPQ 141

Query: 182 ES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            + V +G +  ++ + D       +        +    F+ +  ++   + D      V 
Sbjct: 142 STLVATGSMDTTVKLWDVQNGEEVFTLTGHSAEIISLSFNTSGNRIVTGSLDH----TVA 197

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTN 299
           + DT   +    +    + I +  F+ +    +++   D+   ++  D  S      LT 
Sbjct: 198 VWDTDTGKKVYTLIGHCAEISSALFNWD-SSLILTGSMDKTCMLW--DATSGKCVATLTG 254

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQ 357
                + + +          S  +G  ++Y    + + +K I++    E       ++PQ
Sbjct: 255 HDEKILDSCFDSTGKLFA-TSSVDGTARVY----HTATRKLITKLEGHEGEVSKISFNPQ 309

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTG 415
           G+ +  T  S +   I        Q   ++E    +  +  ++  G  +I   +   D  
Sbjct: 310 GNHLL-TGSSDKTARIW--DAQTGQCLQVLEGHTDEIFSCAFNYQGNMVITGSR---DNT 363

Query: 416 SKLY 419
            +++
Sbjct: 364 CRIW 367


>gi|168700873|ref|ZP_02733150.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 965

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 79/241 (32%), Gaps = 40/241 (16%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRF----SPNQQKVAYATYDDEDILRVYLMDTRID 247
            L   + D        P R    +  RF    S + ++VA           V + + R +
Sbjct: 352 RLWQPEADTPEPAVRLPVRVPDEWHGRFHSYISSDAKRVACCA-----PESVIVFERRGE 406

Query: 248 RAPKRIGNFR-SMILAPRFSSNGKRALISVQ--------------KDEAMDIYSVDLQSN 292
             P  IG F+   + +  F+ + K+ ++  +              K+    ++  D+Q+ 
Sbjct: 407 NVPAEIGKFKFPPVESLAFAPDSKKLVVVTRNRKGNSESIRNKEKKENEYAVHVADIQTG 466

Query: 293 ATERLTNTLFINISASYSPDSSQIVFES-------DREGKEQLYVMQSNGSDQKRISQDK 345
            +  L   L       +S D  ++   +       D    ++L     +G    R++ + 
Sbjct: 467 QSRALVTDLSYIREVRFSADGRRVAVNTFDELLVFDVGTGKELARWSVDGFKLDRVALNT 526

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSL 404
                            + + + E   +   +    + +   V        T++P G+++
Sbjct: 527 TGDVVAAR--------LYKEATEEHLDVRFFEATTGKAQKGAVGTDGGDWVTFAPDGKTV 578

Query: 405 I 405
           +
Sbjct: 579 L 579


>gi|168012126|ref|XP_001758753.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689890|gb|EDQ76259.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 412

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 96/307 (31%), Gaps = 47/307 (15%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           TG V   G D +   +R+ D +  KQ+ G                  D I        G 
Sbjct: 99  TGLVATGGGDDVTYVWRVGDAESHKQLGGHT----------------DSIASLAFSHDG- 141

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
                    + + SG +   + + D     ++       + +   ++ P    +   + D
Sbjct: 142 ---------QLLASGGLDGIVNIWDSSTGTLKQKLEGPGEAIEWVKWHPRGHVLLAGSED 192

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
               +  +L +         +      +    F+ +GK    +  +D +  ++  + +S 
Sbjct: 193 ----VTAWLWNADTAACMAVLSGHSGAVTCGDFTPDGKTIC-TGSEDGSFRVW--NPKSG 245

Query: 293 ATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            + R+      +       + S D S I      +      ++            +   S
Sbjct: 246 ESTRVVQGHPFHTEGLTCLAISND-STIALTGSTD--NNACIVNIQTGRVHGTLAEHSKS 302

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIF 406
                +S   +L+A     G    + +      Q R     ED  ++   WSP+ + +++
Sbjct: 303 VESVGFSSGLNLVATGAMDG---KLIIWDLQTLQSRCTCEHEDGLVKI-LWSPASQ-IVY 357

Query: 407 SRKKDGD 413
           +   DG 
Sbjct: 358 TACLDGK 364


>gi|320167468|gb|EFW44367.1| guanine nucleotide-binding protein beta subunit [Capsaspora
           owczarzaki ATCC 30864]
          Length = 341

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 69/212 (32%), Gaps = 22/212 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A I       D  +   RF PN++++  A+ D        L D       K         
Sbjct: 133 ARIYRTLSGHDGFISCCRFLPNERQIITASGDA----TCVLWDIETGERLKAFTGHAGEC 188

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE 319
           L+   S +G    +S   D    I+  D++S    +  N    +++A  Y P+     F 
Sbjct: 189 LSVNVSPDGST-FVSGSSDGTCRIW--DVRSGRCVQWFNGHESDVNAVVYFPNGE--AFG 243

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           S   G +       +    ++I Q       A      +S  G L+       + F + V
Sbjct: 244 S---GSDDDTCRLFDLRADQQIMQYSRDVIMAGVTSIDFSMSGRLLFAGH---DDFQVNV 297

Query: 376 MKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
                 +   L++    Q      S  G +L 
Sbjct: 298 WDTLRGERVALLDAHEHQVSCLGVSSDGAALA 329



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/233 (13%), Positives = 70/233 (30%), Gaps = 34/233 (14%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R         ++  +++ +++++  A  D +    + + D         I    S ++  
Sbjct: 49  RRTLKGHLAKVYAMQWANDRRRIVSAAQDGK----LIIWDAFKMHKHHAIALRSSWVMTC 104

Query: 264 RFSSNGKRAL----------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +S +G+              S+++ E   IY           L+          + P+ 
Sbjct: 105 AYSPSGQFVACGGLDNVCTLYSIREGEDARIY---------RTLSGHDGFISCCRFLPNE 155

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            QI+  S   G     +      ++ +              SP G         G     
Sbjct: 156 RQIITAS---GDATCVLWDIETGERLKAFTGHAGECLSVNVSPDGSTFVSGSSDGT---C 209

Query: 374 GVMKKDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +      +         S++ A  + P+G    F    D DT  +L+ +  +
Sbjct: 210 RIWDVRSGRCVQWFNGHESDVNAVVYFPNGE--AFGSGSDDDT-CRLFDLRAD 259


>gi|62859649|ref|NP_001016724.1| eukaryotic translation initiation factor 3, subunit B [Xenopus
           (Silurana) tropicalis]
          Length = 676

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 79/220 (35%), Gaps = 22/220 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD- 279
           P+ +      Y+  D   ++  D +     +    +    +  R+S  G       Q+  
Sbjct: 164 PDCRDQFSVIYESGDRTSIFWTDVKEPVPVEERARWTETYV--RWSPKGTYLATFHQRGI 221

Query: 280 ---EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQ- 332
                     +   S+   +L +         +SP    +V  S   D + + Q  ++  
Sbjct: 222 ALWGGEKFKQIQRFSHQGVQLID---------FSPCERYLVTFSPLMDTKEEPQAIIIWD 272

Query: 333 -SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              G +++    +  A +    WS  G    F + + +  +I      G  ++  ++ + 
Sbjct: 273 ILTGQNKRGFHCESSAHWPIFKWSHDGKF--FARMTLDTLSIYETPSMGLLDKKSLKITG 330

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           ++  +WSP G  + F   +D D  +++  + L  R E  +
Sbjct: 331 IKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPSRQEIRV 370



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 45/282 (15%), Positives = 91/282 (32%), Gaps = 26/282 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDE 234
           V+ S +    +    ++  D   G N R            P  ++S + +  A  T D  
Sbjct: 253 VTFSPLMDTKEEPQAIIIWDILTGQNKRGFHCESS--AHWPIFKWSHDGKFFARMTLDTL 310

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSN 292
            I     M   +D+   +I   +       +S  G      V +D+ +      + L S 
Sbjct: 311 SIYETPSMGL-LDKKSLKITGIKDF----SWSPGGNIIAFWVPEDKDIPARVTLMQLPSR 365

Query: 293 ATERLTN-TLFINISASYSPDSSQIVFESDRE--GKEQLY----VMQSNGSDQKRISQDK 345
              R+ N    ++    +  +   +  + DR   G + +     + +           + 
Sbjct: 366 QEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGVVTNFEIFRMREKQVPVDVVEM 425

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAI--GVMKKDGSQERL-LVEDSNLQAPTWSPSGR 402
           +       W P G   A       + ++    +K +G  E + + +        WSP G+
Sbjct: 426 KDGIIAFAWEPNGSKFAVLHGEVPRISVSFYHVKNNGKIELIKMYDKQQANTIFWSPQGQ 485

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            L+ +  +       L  +D +      I     ASD +W  
Sbjct: 486 FLVLAGLRS--MNGALAFVDTSDCTIMNIAEHYTASDVEWDP 525



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 25/205 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 335 SWSPGGNIIAFWVPEDKDIPARVTLMQLPSRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 394

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT-----LFINISASYSPDSSQIVFESDRE 323
            +            +I+ +       +++          I I+ ++ P+ S+  F     
Sbjct: 395 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKDGI-IAFAWEPNGSK--FAVLHG 446

Query: 324 GKEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              ++ V      N    + I    +       WSPQG  +          A+  +    
Sbjct: 447 EVPRISVSFYHVKNNGKIELIKMYDKQQANTIFWSPQGQFLVLAGLRSMNGALAFVDTSD 506

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI 405
                + E        W P+GR ++
Sbjct: 507 CTIMNIAEHYTASDVEWDPTGRYVV 531


>gi|88860303|ref|ZP_01134941.1| N-terminal winged-HTH domain fused to TolB-like domain
           [Pseudoalteromonas tunicata D2]
 gi|88817501|gb|EAR27318.1| N-terminal winged-HTH domain fused to TolB-like domain
           [Pseudoalteromonas tunicata D2]
          Length = 666

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 3/77 (3%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV-MQSNGSDQKRISQDKEASYFD 351
             + +  + F+  SA + P+   I F S+R G EQL++   +   + K+++        D
Sbjct: 413 QAKHILTSEFLERSAQFQPNGQAIAFISNRTGTEQLWLNQNTTAQNPKQLTFADP--VHD 470

Query: 352 PVWSPQGDLIAFTKFSG 368
            +W   G  + F    G
Sbjct: 471 YIWQADGQALWFLTAKG 487


>gi|323356743|ref|YP_004223139.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Microbacterium
           testaceum StLB037]
 gi|323273114|dbj|BAJ73259.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Microbacterium
           testaceum StLB037]
          Length = 630

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/205 (13%), Positives = 63/205 (30%), Gaps = 16/205 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDIL----RVYLMDTRIDRAPKRIGNFRSMIL 261
           +       L +P  SP+ + +A+  ++  D+      + + D          G      L
Sbjct: 161 ILAEGSDFLAQPALSPDGRHLAWVAWNHPDMPWDATTIRVADLESGVVHDVAGGENRAPL 220

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
            P +  +    L +   D   +++   L   A  +       +         ++  F + 
Sbjct: 221 QPVWIGD-DELLYADDPDGRWNLFRHPLD--AEAQAVAPADADTGGGLWVLGTR-WFAAT 276

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS------PQGDLIAFTKFSGEKFA-IG 374
            +G+  + V    G +   I+         P  S       +G  +  +   G   + + 
Sbjct: 277 DDGR-IVAVRTHGGDEVVEIAPSGIRPLEVPPVSGAAVDDARGSRVLISGADGGGRSGLW 335

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSP 399
           ++  D     L+   +      W P
Sbjct: 336 LVDLDSGVVDLVTGGAGPWGDDWMP 360



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 74/223 (33%), Gaps = 27/223 (12%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-----EAMDIYSVDLQSNA 293
           +  + T ++ A + +      +  P  S +G+              +A  I   DL+S  
Sbjct: 148 IVRIRTDVEAAGEILAEGSDFLAQPALSPDGRHLAWVAWNHPDMPWDATTIRVADLESGV 207

Query: 294 TERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS---- 348
              +        +   +  D  ++++  D +G+  L+    +   Q     D +      
Sbjct: 208 VHDVAGGENRAPLQPVWIGD-DELLYADDPDGRWNLFRHPLDAEAQAVAPADADTGGGLW 266

Query: 349 ---YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSG 401
                    +  G ++A     G++    V++   S  R L    V  + +        G
Sbjct: 267 VLGTRWFAATDDGRIVAVRTHGGDE----VVEIAPSGIRPLEVPPVSGAAVDDAR----G 318

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
             ++ S   DG   S L+ +DL+     L+   A      W+ 
Sbjct: 319 SRVLIS-GADGGGRSGLWLVDLDSGVVDLVTGGAGPWGDDWMP 360


>gi|261213075|ref|ZP_05927359.1| protease II [Vibrio sp. RC341]
 gi|260838140|gb|EEX64817.1| protease II [Vibrio sp. RC341]
          Length = 666

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 52/175 (29%), Gaps = 27/175 (15%)

Query: 218 RFSPN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            + P+   + +A A     D      +    DR  + I    S   A  ++ +GK     
Sbjct: 126 AWMPDTSGEWIALAEDTRGDEQFRITLVHVTDRTERVISTTASTYFA--WAPDGKSLYYL 183

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              +    +   +L S  + +L        SA +       +F        +  V+Q N 
Sbjct: 184 SNLNSTTQLQRFELASGQSTQLGEWR----SAEW-------LFSLYSASNPRYIVIQQNN 232

Query: 336 SD--QKRISQDKEASYFDPVWSPQ----------GDLIAFTKFSGEKFAIGVMKK 378
            +  Q+R+   +       + S +          GD +         F +     
Sbjct: 233 ENATQQRLLDTQTGRLMPWLRSAEEGVEYYVDVLGDTLYINSNHQGTFQLYRQPL 287



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 9/103 (8%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQ--GDLIAFT--KFSGEKFAIG 374
            G  QL  + +    +  ++    A  FD      W P   G+ IA        E+F I 
Sbjct: 92  NGDRQLVKLNAQHEVKPLLNLSVRADAFDYYQLAAWMPDTSGEWIALAEDTRGDEQFRIT 151

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           ++      ER++   ++     W+P G+SL +    +  T  +
Sbjct: 152 LVHVTDRTERVISTTASTYF-AWAPDGKSLYYLSNLNSTTQLQ 193



 Score = 36.5 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 5/91 (5%)

Query: 307 ASYSPD--SSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAF 363
           A++ PD     I    D  G EQ  +   + +D  +R+     ++YF   W+P G  + +
Sbjct: 125 AAWMPDTSGEWIALAEDTRGDEQFRITLVHVTDRTERVISTTASTYF--AWAPDGKSLYY 182

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                    +   +    Q   L E  + + 
Sbjct: 183 LSNLNSTTQLQRFELASGQSTQLGEWRSAEW 213


>gi|242314780|ref|ZP_04813796.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
 gi|242138019|gb|EES24421.1| conserved hypothetical protein [Burkholderia pseudomallei 1106b]
          Length = 411

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 52/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D L V +R +D    +        +   S+ 
Sbjct: 33  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGLYV-YR-FDTDSGRVSPVSSAKAENPSYL 90

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 91  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 148

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 149 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 208

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 209 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 242

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    I  +       
Sbjct: 243 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLAHIETVPMTAPGF 302

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 303 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 347


>gi|240273367|gb|EER36888.1| WD40 domain-containing protein [Ajellomyces capsulatus H143]
          Length = 515

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 58/139 (41%), Gaps = 9/139 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           ++E +VS     ++ + D   +N          + +    FSP+   +A A++D+     
Sbjct: 370 ITERLVSASDDFTMFLWDPATSNKPVARLLGHQKEVNHVTFSPDGAYIASASFDN----H 425

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
           V L + R  +    +      +    FS++  R L+S  KD  + ++  D+++      L
Sbjct: 426 VKLWNARDGKFISSLRGHVGAVYQCCFSAD-SRLLVSSSKDTTLKVW--DVRTGKLFMDL 482

Query: 298 TNTLFINISASYSPDSSQI 316
              L    +  +SPD  ++
Sbjct: 483 PGHLDEVYAVDWSPDGEKV 501



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 40/139 (28%), Gaps = 6/139 (4%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            K+        D   ++L D      P  R+   +  +    FS +G     S   D  +
Sbjct: 368 NKITERLVSASDDFTMFLWDPATSNKPVARLLGHQKEVNHVTFSPDGAYIA-SASFDNHV 426

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            +++          L   +       +S DS  +V  S       L V            
Sbjct: 427 KLWNA-RDGKFISSLRGHVGAVYQCCFSADSRLLVSSSK---DTTLKVWDVRTGKLFMDL 482

Query: 343 QDKEASYFDPVWSPQGDLI 361
                  +   WSP G+ +
Sbjct: 483 PGHLDEVYAVDWSPDGEKV 501



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 40/132 (30%), Gaps = 4/132 (3%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++     +    RL          ++SPD + I   S       + +  
Sbjct: 374 LVSASDDFTMFLWDPATSNKPVARLLGHQKEVNHVTFSPDGAYIASASF---DNHVKLWN 430

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +         +    + +   +S    L+  +        +  ++       L      +
Sbjct: 431 ARDGKFISSLRGHVGAVYQCCFSADSRLLV-SSSKDTTLKVWDVRTGKLFMDLPGHLDEV 489

Query: 393 QAPTWSPSGRSL 404
            A  WSP G  +
Sbjct: 490 YAVDWSPDGEKV 501


>gi|91200564|emb|CAJ73613.1| hypothetical (di heme) protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 809

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 80/263 (30%), Gaps = 62/263 (23%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T   D     P + P   ++     + +++              K + N      A  F 
Sbjct: 67  TAKGDPYQNYPHYIPEGSRIVLFDLNTKEL--------------KVLTN----DFATAFD 108

Query: 267 S----NGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                +GK+   +   +K     I+ +++  +   ++T+      S  Y          S
Sbjct: 109 PCTYWDGKKFAFAGVHKKGGGCQIWEMNIDGSGLRQMTDLKGTCRSPIYYAAG------S 162

Query: 321 DREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             EG+ + ++  +    D K     ++        SP+G +  F   +   + +  +   
Sbjct: 163 IEEGEGRIIWRDRYFEGDWKEHGMVEKTGMIIFSGSPEGVMDEFH--NPYAYNLYRLDTQ 220

Query: 380 GSQE----------------------RLLVEDSNLQAPTWSPSGRSLIFSR-----KKDG 412
           G +                       ++    S+   P  +P G  ++FS       + G
Sbjct: 221 GGKIIQRITGHVLSGIEFPHLNTTIDQITYNLSSNFDPWLTPDGN-ILFSSVQANGSRAG 279

Query: 413 DTGSKLYSID-LNGRNETLINTP 434
             G  +  +D  +G     I   
Sbjct: 280 GEGRVMICVDNWDGAYPRPIYGN 302


>gi|84996467|ref|XP_952955.1| hypothetical protein [Theileria annulata strain Ankara]
 gi|65303952|emb|CAI76331.1| hypothetical protein, conserved [Theileria annulata]
          Length = 459

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 48/268 (17%), Positives = 93/268 (34%), Gaps = 40/268 (14%)

Query: 164 QSITGEKGDFNSRILF-VSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           +++   + DF+  ++F ++   V   SG    ++ + D                +    +
Sbjct: 68  EALCRSREDFSGELVFKITPDGVYLASGSGDTTVRIWDLATQTPIKTFTGHTNWVMSISW 127

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------SSNGKRAL 273
           SP+     Y         +V + + +        G+ +  + A  +      S+N    L
Sbjct: 128 SPDG----YTLSSGGMDNKVIIWNPKTGSGTDLKGHTK-AVTALSWQPLHNLSANEYPLL 182

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQ 332
            S   D  + I+  D++S    R+ +     IS   +S +  + +F S R+   +++   
Sbjct: 183 ASGSMDYTVRIW--DVKSFVCIRVLSGHTKGISQVLWSAEFKERLFSSSRDTLIKVWNTN 240

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD------------- 379
            +GS  K +       + + + S    LI    FS E F  G  K D             
Sbjct: 241 -DGSLVKDL--KGHGHWINTLTSNVSRLIKSGPFSPENFESGKCKFDSMEQMIKESKKIY 297

Query: 380 ------GSQERLLVEDSNLQAPTWSPSG 401
                   QERLL    +     W P+ 
Sbjct: 298 EKFKLESGQERLLSGSDDNTMFIWLPNS 325


>gi|321458341|gb|EFX69411.1| hypothetical protein DAPPUDRAFT_300951 [Daphnia pulex]
          Length = 487

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 63/152 (41%), Gaps = 10/152 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    +L + + +             Q++ + +FSP+ + +A A++D      + 
Sbjct: 344 ERLVSGSDDFTLFLWNPETDKKHLARMTGHQQLVNDVKFSPDSRLIASASFDK----SIK 399

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + D R       +      +    +S++  R L+S   D  + ++  +L++         
Sbjct: 400 IWDGRTGNFITTLRGHVQAVYQISWSAD-SRLLVSGSADSTLKVW--NLKTKKLHLDLPG 456

Query: 301 LFINISAS-YSPDSSQIVFESDREGKEQLYVM 331
               + A  +SPDS ++V    R+   +++  
Sbjct: 457 HGDEVFAVDWSPDSQRVV-SGGRDKVLKIWRY 487



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 48/155 (30%), Gaps = 11/155 (7%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + +++ +       R+T    +     +SPDS  I   S     + +
Sbjct: 342 GPERLVSGSDDFTLFLWNPETDKKHLARMTGHQQLVNDVKFSPDSRLIASASF---DKSI 398

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +      +     +    + +   WS    L+           + V      +  L + 
Sbjct: 399 KIWDGRTGNFITTLRGHVQAVYQISWSADSRLLVSGSADST---LKVWNLKTKKLHLDLP 455

Query: 389 DSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
               +     WSP  + ++       D   K++  
Sbjct: 456 GHGDEVFAVDWSPDSQRVV---SGGRDKVLKIWRY 487



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P   + +    FSP+ +++A  + D      V   D   +         R  +L   ++
Sbjct: 114 LPGHSEAVISVSFSPDGKQLASGSGDT----TVRFWDLNTESPLFTCKGHRHWVLCTAWA 169

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-----SPDSSQIVFESD 321
            NG+    S  K   + ++     +   + L           +     +P   ++   S 
Sbjct: 170 PNGQTLA-SACKSGEIWLWDAATGTQKGKPLVGHKQWVTWLVWEPFHLNPQCRKLA-SSS 227

Query: 322 REGKEQLY 329
           ++G  +++
Sbjct: 228 KDGDVRIW 235



 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 61/181 (33%), Gaps = 14/181 (7%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            +       + R    +      +++  FS +GK+   S   D  +  + ++ +S     
Sbjct: 98  PQAVFQVRAVTRCTSSLPGHSEAVISVSFSPDGKQLA-SGSGDTTVRFWDLNTES-PLFT 155

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVW- 354
                   +  +++P+   +   + + G  ++++  +    QK       +      VW 
Sbjct: 156 CKGHRHWVLCTAWAPNGQTLA-SACKSG--EIWLWDAATGTQKGKPLVGHKQWVTWLVWE 212

Query: 355 ----SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               +PQ   +A +   G+   I  +        L      +    W   G  LI+S  +
Sbjct: 213 PFHLNPQCRKLASSSKDGDV-RIWDVVLGTCLINLAGHQQGVSCIRWG--GTGLIYSASQ 269

Query: 411 D 411
           D
Sbjct: 270 D 270


>gi|302344893|ref|YP_003813246.1| hypothetical protein HMPREF0659_A5119 [Prevotella melaninogenica
           ATCC 25845]
 gi|302149316|gb|ADK95578.1| conserved hypothetical protein [Prevotella melaninogenica ATCC
           25845]
          Length = 364

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 60/192 (31%), Gaps = 21/192 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALIS 275
           F+P+   +      D  +   Y    +         N +     PR   FS NG+ A + 
Sbjct: 173 FAPDGYILTTDFSGDRILCFSYNKRDKKLEDHGIAANVKPG-SGPRHLVFSPNGRYAYLM 231

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YSPDSSQIVFESDREGKEQLY 329
            +    + +YS        + L +    N +A        SPD    V+ S R   + + 
Sbjct: 232 NELSGKVIVYSY--SDGKLKELQSIAADNANARGGADIHVSPDG-MFVYTSTRLKGDGIT 288

Query: 330 VMQSNGSDQ-----KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           + +            +++     ++     +P G+ +           +    KD    +
Sbjct: 289 IFRVGNKGTLTRVGAQLTGKHPRNF---AITPNGNFLLVACRDDNSIQVYSRDKDTGLLK 345

Query: 385 LLVEDSNLQAPT 396
              +D  L  P 
Sbjct: 346 NTHQDIVLSHPV 357


>gi|134076307|emb|CAK39563.1| unnamed protein product [Aspergillus niger]
          Length = 1340

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 77/233 (33%), Gaps = 33/233 (14%)

Query: 206 LTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAP 263
           L       + + R+SP +    A AT    D   + L D R   AP  RI        + 
Sbjct: 244 LFHGNSDAVRDIRWSPTDGVMFATAT----DSGAIQLWDCRKSSAPLMRITAHDRPCFSV 299

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-------LTNTLFINIS---ASYS--P 311
            +  +G+  +          +   D  S+A  R        T    +N+     S++  P
Sbjct: 300 DWHPDGRHIV---SGGTDRQVKVWDFSSSAERRQKPTFQFRTPQAVLNVRWRPPSWAREP 356

Query: 312 DSS-----QIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTK 365
           + S       V  S  +   ++++          R     +A   D +W      + +T 
Sbjct: 357 EGSGDWQSSQVVTSYDKEDPRVHLWDLRRPHIPFREFDRYDAHATDLLW--HSKDLLWTV 414

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                F     + D      ++      +  WSPSG  L F++K+   +   L
Sbjct: 415 GEAGAFT----QTDIRYAPQIINQRPTCSVAWSPSGEVLAFAQKRPQRSTLGL 463



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 90/303 (29%), Gaps = 49/303 (16%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQK---- 225
           G  ++R   +  +  +   K  + +   D +  R +      +IL   R SP+       
Sbjct: 68  GPRSTRSKSLPGASQTVTHKTGIPIAALDISPQRTHAVIGGKEILKTIRVSPDHSSEEFN 127

Query: 226 -----VAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                ++Y++ +     L     D    R  K        I+A   + NG+  +  +++ 
Sbjct: 128 LRNAIISYSSTHHGGSGLSARHKDQLTVRDVKWSHGEYDQIIATAVA-NGRIVVYDLRRT 186

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             ++       S    RL         AS+    SQ            + +     +  +
Sbjct: 187 G-LECCRFQGHSRQVHRLAFNPH---HASWLLSGSQ---------DSSIRMWDLRTASAE 233

Query: 340 R---------ISQDKEASYFDPVWSP-QGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVE 388
           R         +      +  D  WSP  G + A T        +   +K  +   R+   
Sbjct: 234 RGVLVCGSLDLFHGNSDAVRDIRWSPTDGVMFA-TATDSGAIQLWDCRKSSAPLMRITAH 292

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN----TPAYA-----SD 439
           D    +  W P GR ++       D   K++    +            TP          
Sbjct: 293 DRPCFSVDWHPDGRHIV---SGGTDRQVKVWDFSSSAERRQKPTFQFRTPQAVLNVRWRP 349

Query: 440 PQW 442
           P W
Sbjct: 350 PSW 352


>gi|84624622|ref|YP_451994.1| peptidase [Xanthomonas oryzae pv. oryzae MAFF 311018]
 gi|84368562|dbj|BAE69720.1| peptidase [Xanthomonas oryzae pv. oryzae MAFF 311018]
          Length = 781

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 9/106 (8%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
           D +QIV+ S+R+G E LY+      +  ++I++                 + FT      
Sbjct: 375 DGAQIVWASERDGWEHLYLYDGRSGEVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 434

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSR 408
                      +  DGS    L   +      +SP G+ +  ++SR
Sbjct: 435 GEDPYDRHAYRIGLDGSGLTALTPVAADHEVRYSPDGKWMLDLYSR 480



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 50/129 (38%), Gaps = 12/129 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA-SYSPDSSQIVFESD--RE 323
           +G + + + ++D    +Y  D +S     ++T   ++          + Q+ F +   + 
Sbjct: 375 DGAQIVWASERDGWEHLYLYDGRSGEVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 434

Query: 324 GKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMK 377
           G++      Y +  +GS    ++    A+  +  +SP G  +   +++            
Sbjct: 435 GEDPYDRHAYRIGLDGSGLTALTPV--AADHEVRYSPDGKWMLDLYSRVDLGPVLELRRS 492

Query: 378 KDGSQERLL 386
            DGS  R +
Sbjct: 493 ADGSLARTV 501


>gi|298248183|ref|ZP_06971988.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297550842|gb|EFH84708.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 433

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 83/287 (28%), Gaps = 64/287 (22%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +    F P+ Q +A  + D      + L D         +      + A  
Sbjct: 139 QTLKGHASWVRCLAFRPDGQILASGSIDG----SIKLWDPSRGHLLHTLTGHGGGVFALA 194

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           +S +G   L+S  +D A+ ++  D QS    R L        S +   D   +V  S   
Sbjct: 195 WSPSGG-LLVSGGQDSAIKLW--DPQSGKLLRSLEGHGNAVRSLALGTDGQTLVSAST-- 249

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-------------------------- 357
             + + +             D  +  +    SP                           
Sbjct: 250 -DQTVRLWDLQTGRLLLPFIDHPSPLYSVAMSPNHQIIVSGDEVGVIRLWHAHTRKLLRT 308

Query: 358 -----GDLIAFTKFSGEKFAI-GVMKKDGSQERL---------------LVEDSNLQAPT 396
                G +++ T     +F I   M   GS +R                      +++  
Sbjct: 309 LRGHSGKVLSLTMVEDGQFPISSTMLMSGSADRTMKWWGADDGRLISTFTGHTGAVRSVA 368

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           + P+ +++I S +        LY     G  ET+   P +A  P + 
Sbjct: 369 FHPAWQTVISSSEDKTIKEWNLY-----GSQETIRTLPGHAG-PVYS 409



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 43/291 (14%), Positives = 86/291 (29%), Gaps = 46/291 (15%)

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
           S+      +T          W+  G      G ++  G+D      +LWD +  K +  +
Sbjct: 175 SRGHLLHTLTGHGGGVFALAWSPSG------GLLVSGGQDS---AIKLWDPQSGKLL--R 223

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
                  + R +A                     +    +++VS     ++ + D     
Sbjct: 224 SLEGHGNAVRSLA---------------------LGTDGQTLVSASTDQTVRLWDLQTGR 262

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +          L+    SPN Q +       +++  + L      +  + +      +L+
Sbjct: 263 LLLPFIDHPSPLYSVAMSPNHQIIV----SGDEVGVIRLWHAHTRKLLRTLRGHSGKVLS 318

Query: 263 PRFSSNGK-----RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
                +G+       L+S   D  M  +  D         T       S ++ P + Q V
Sbjct: 319 LTMVEDGQFPISSTMLMSGSADRTMKWWGAD-DGRLISTFTGHTGAVRSVAFHP-AWQTV 376

Query: 318 FESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFS 367
             S  +  + +      GS +  R         +    SP    IA    S
Sbjct: 377 ISSSED--KTIKEWNLYGSQETIRTLPGHAGPVYSLAISPDSRFIASGSLS 425


>gi|170751156|ref|YP_001757416.1| peptidase S9 prolyl oligopeptidase [Methylobacterium radiotolerans
           JCM 2831]
 gi|170657678|gb|ACB26733.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Methylobacterium radiotolerans JCM 2831]
          Length = 632

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 46/134 (34%), Gaps = 7/134 (5%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
           S +G+        +  M+I+     + +   +LT      ++A  ++  ++ +V+  D +
Sbjct: 23  SPDGEWLTWVAPANGVMNIFIAPRATPDRARQLTFDQGRGVTAYCWTMGATHLVYGQDTD 82

Query: 324 G--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIGVMKK 378
           G    +LY +       + ++ + +        S       ++           +  +  
Sbjct: 83  GDENTRLYALNIADGSVRNLTPEPDVKANLGGVSRKIRDMIMVYLNDRDPRFHDLYAINP 142

Query: 379 DGSQERLLVEDSNL 392
              + R L ++   
Sbjct: 143 ATGERRKLADNPGF 156



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 52/157 (33%), Gaps = 19/157 (12%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDP 352
             R+            SPD   + + +   G   +++      D  ++++ D+       
Sbjct: 7   PRRILFGNPERAFRQISPDGEWLTWVAPANGVMNIFIAPRATPDRARQLTFDQGRGVTAY 66

Query: 353 VWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPS----GRSL-- 404
            W+     + + + +       +  +       R L  + +++A     +     R +  
Sbjct: 67  CWTMGATHLVYGQDTDGDENTRLYALNIADGSVRNLTPEPDVKA-----NLGGVSRKIRD 121

Query: 405 ---IFSRKKDGDTGSKLYSID-LNGRNETLINTPAYA 437
              ++   +D      LY+I+   G    L + P +A
Sbjct: 122 MIMVYLNDRDPRF-HDLYAINPATGERRKLADNPGFA 157


>gi|323158889|gb|EFZ44900.1| rhomboid family protein [Escherichia coli E128010]
          Length = 591

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/254 (13%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T            S +  K          +  +      ++ D  +++   
Sbjct: 348 ATGEIIQSITTGAHPDSLI--LSRDGTKAWVMNRTSNSVSAIDLVAYQHVADIPLEKYDG 405

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+    +   +I  ++  ++  E            +  +
Sbjct: 406 TGTSGKPGAWVMALSPDERTLLV--PGEGRGNIVRINTITHQKEDFPAGDARGTISAMRF 463

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ +     S   +      + Y     SP G  +A   +  +
Sbjct: 464 RPENGEVIFA-DSQGISRISIGDQQTSIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 520

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 521 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 569

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 570 SLDPQAIIRHPQYG 583


>gi|73671155|ref|YP_307170.1| hypothetical protein Mbar_A3727 [Methanosarcina barkeri str.
           Fusaro]
 gi|72398317|gb|AAZ72590.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 331

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/295 (14%), Positives = 89/295 (30%), Gaps = 45/295 (15%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD----GANIRYLTPSRDQILFEPRF 219
           + +T     F    +F +ES  +G+    L    R     G  +  LT +          
Sbjct: 34  ERLTS-GISFYDNHVFWTESAGNGVHAYDLTTRKRTDIEGGHAVESLTHTH--------- 83

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALI--- 274
                KV +   D      VY+ D       K     R        + +  G   +    
Sbjct: 84  ---GNKVVWTDAD-GKADSVYMYDVSTGNETKIASERR--------APDIYGNYIVYTDS 131

Query: 275 ---SVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSP--DSSQIVFESDREGKEQ 327
              S Q  +   IY  +L +N   ++            SY    D + +  +++      
Sbjct: 132 NYYSGQDHQNNGIYLYNLNTNNETKIVTVHGYPAITVHSYPAIYDKTVVWSQANNSSGYD 191

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +          I+    + Y        G+++ + +       + +      +   + 
Sbjct: 192 ICMYDICTHQTSTITTTNSSGYESQGLDIYGNVVVWIESG----NLYMYDITAHKVTQVT 247

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASDPQ 441
              N   P     G+ ++++  +    G   +Y  +++    T I T   A +P 
Sbjct: 248 NSGNAIDPAI--YGKRIVYTLNRPHSFGVGDIYMYEMSTAKTTRITTSTCAFNPS 300


>gi|115352412|ref|YP_774251.1| 3-carboxymuconate cyclase-like protein [Burkholderia ambifaria
           AMMD]
 gi|115282400|gb|ABI87917.1| 3-carboxymuconate cyclase-like protein [Burkholderia ambifaria
           AMMD]
          Length = 415

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 94/326 (28%), Gaps = 30/326 (9%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ-IIGKKFFSSPASWRKIAHTISDDIYQS 165
           GA  L+ G     G D + V +R +D K      +      +P+         +      
Sbjct: 50  GAFHLLVGTYTGRGSDGIYV-YR-FDTKTGSVAPVSSAKTVNPSYLLPSRDGRTVYAVNE 107

Query: 166 ITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQ-----ILFEPRF 219
           + G+ G    R    +            +  +  +G +  YL  S D        +    
Sbjct: 108 LPGDNGPATQRGGISAFGFDPKTGALTFIDRVSSEGNDPCYLALSPDGKYLVTANYSVAA 167

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            P      + T D   +    L        P +     + + +  FS +G+   +     
Sbjct: 168 DPGGSFAVFPTRDGGSVGPAVLTVHHEGTGPVKGRQDGAHVHSTVFSPDGRYLFVQDLGA 227

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINI-------SASYSPDSSQIVFESDREGKEQLY-- 329
           + +  Y   +         T+T +  +          +  D       S+     +++  
Sbjct: 228 DKLYGYRYTVDGSRGLISPTDTRYTPVKTGSGPRHMVFGADGRFAYVTSELNASVEVFGY 287

Query: 330 ----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI---GVMKKDGSQ 382
               +               +        SP G  + +    G+   I    V + DG  
Sbjct: 288 HDGKLTPVQTLPMTVPGFKGKVGGGAIHLSPDGRFL-YVTNRGDVNEIVIYAVNQTDGRL 346

Query: 383 ERLLVEDSNLQAPT---WSPSGRSLI 405
           + +  + S  + P      P+G+ LI
Sbjct: 347 KTVGRQSSLGKTPREFLIDPTGKWLI 372


>gi|328860879|gb|EGG09984.1| hypothetical protein MELLADRAFT_47296 [Melampsora larici-populina
           98AG31]
          Length = 447

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/229 (12%), Positives = 69/229 (30%), Gaps = 25/229 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--------NF 256
           ++       ++   +S +  ++A A     D   +    T +    ++I           
Sbjct: 136 HVLSQHSDEVWRIEWSHDGTRLASA---GRDTRCIIWKLTPVKGNTRQITIAVHLVLDGH 192

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQ 315
            + I    +S +    L++   D  + ++  + ++            ++SA S+ PD   
Sbjct: 193 PAGISCIAWSPD-DSVLLTGS-DCTIKMW--NTRTGDCISTMVKHEYDVSALSWLPDGQG 248

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            V      G +   +          + +   +   D   SP G  +     +        
Sbjct: 249 FV----SGGMDSDVLFWDLKGQTTFMWRVSPSRILDLAVSPDGKRLVAIGIAQVNVGNSQ 304

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +   S    L  +      + S   +   ++          LYS+D +
Sbjct: 305 TEPSQSSSAQLTRELTC--VSISHDSK---YALINQSPNEVHLYSLDTH 348


>gi|330820284|ref|YP_004349146.1| YVTN beta-propeller repeat-containing protein [Burkholderia
           gladioli BSR3]
 gi|327372279|gb|AEA63634.1| YVTN beta-propeller repeat-containing protein [Burkholderia
           gladioli BSR3]
          Length = 517

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 65/200 (32%), Gaps = 18/200 (9%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-----------RFSSNGKRALIS 275
            YA     + + V            R+G+      +P            FS +     + 
Sbjct: 68  VYAAEQFSNTVSVTDPADNHLVGVIRLGDPSPGNFSPLYRGQLLVHGMGFSPDHHTLAVV 127

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                +  +  +D ++NA +  T        A ++PD  + V+ + R       +   + 
Sbjct: 128 SI--GSNSVSFIDTRTNAVKHTTYVGRSPHEAFFTPDGKE-VWVTVRGENYVSVIDARSF 184

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            ++ RI+    A     ++SP G      + F+ E   I V         +         
Sbjct: 185 EEKTRIT--VPAGPGMTIFSPDGQYAYVCSSFNPETEVISVADHAIVGH-VPQASPFCPN 241

Query: 395 PTWSPSGRSLIFSRKKDGDT 414
              +P GR + F+ K  G T
Sbjct: 242 IAATPDGRQVWFTLKDVGKT 261



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 71/188 (37%), Gaps = 8/188 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+ ++V + T   E+ + V    +  ++    +     M +   FS +G+ A +    
Sbjct: 159 FTPDGKEV-WVTVRGENYVSVIDARSFEEKTRITVPAGPGMTI---FSPDGQYAYVCSSF 214

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +   ++ SV         +        + + +PD  Q+ F     GK Q++  +   +  
Sbjct: 215 NPETEVISV-ADHAIVGHVPQASPFCPNIAATPDGRQVWFTLKDVGKTQVFDARPPFALL 273

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW- 397
           K +      ++ + V + +G   A+    G    + V + D   +   +   NL    W 
Sbjct: 274 KTLDTGPITNHVNIVHNARGSF-AYVTV-GGLNQVKVFRTDDFSQVATIPVGNLPHGIWP 331

Query: 398 SPSGRSLI 405
           S  G  + 
Sbjct: 332 SGDGTRVY 339



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 53/158 (33%), Gaps = 12/158 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+   +A  +     +  +    T   +    +G          F+ +GK   ++V+ 
Sbjct: 117 FSPDHHTLAVVSIGSNSVSFIDT-RTNAVKHTTYVGRSPHEAF---FTPDGKEVWVTVR- 171

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                +  +D +S   +             +SPD       S    + ++  +    +D 
Sbjct: 172 -GENYVSVIDARSFEEKTRITVPAGPGMTIFSPDGQYAYVCSSFNPETEVISV----ADH 226

Query: 339 KRISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAIG 374
             +    +AS F P    +P G  + FT     K  + 
Sbjct: 227 AIVGHVPQASPFCPNIAATPDGRQVWFTLKDVGKTQVF 264


>gi|311257318|ref|XP_003127068.1| PREDICTED: WD repeat-containing protein 88-like [Sus scrofa]
          Length = 452

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 97/267 (36%), Gaps = 30/267 (11%)

Query: 186 SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG    ++ + D  DGA +R   P+    + E   + + +++  A+YD      V   D 
Sbjct: 100 SGSYDCTVKLWDAMDGAVVRDFEPAPGAPVIECSVTADSRRIVAASYDK----TVRAWDL 155

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTLFI 303
              +   ++ +  + I++ +FS +GK  +  +  D    I  +D   +     + +   +
Sbjct: 156 ETGKLLWKL-SHETFIVSCKFSPDGKYVVSGLDVDCG--ICIIDAKDTTTVSHIKDHHGM 212

Query: 304 NISA-SYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDL 360
           +++A  + PDS ++   S DR     + +           I++    +  +  ++  G  
Sbjct: 213 SVTACCFDPDSQKVASVSFDRS----IKIWDVTSQATLLTITKAHTNAISNCCFTFSGHF 268

Query: 361 IAFTKFSGEKFAIGVMKKDGSQER-----LLVEDSNLQAPT---WSPSGRSLIFSRKKDG 412
           +  + +      + +      + R     + +   +  + +   ++     L+       
Sbjct: 269 LCTSSWDKT---LKIWNVHTGEFRNRGACVTLMQGHEGSVSSCHFARDTSFLV---SGGF 322

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASD 439
           D    ++ +    R   L     +  D
Sbjct: 323 DRVVAIWDVGEGYRKLFLKGHTDWVMD 349


>gi|297734117|emb|CBI15364.3| unnamed protein product [Vitis vinifera]
          Length = 1427

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 78/247 (31%), Gaps = 25/247 (10%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           F S +  +    +     N L +   D    +N   +       +     SPN   +A  
Sbjct: 20  FCSILWDLRAQHLLTSSSNDLSICIHDPLLPSNSPQILRHHRDGVTALALSPNSTCLASG 79

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           + D      V L           +  F   I    F+ +G     +   +    I ++D 
Sbjct: 80  SIDH----SVKLYKFPGGEFQTNVTRFTLPIRVISFNRSGSILAAAGDDEGIKLINTID- 134

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS--DQKRISQDKEA 347
             +    L          ++ P+   +    D  G    + + S  +    K I+ D  +
Sbjct: 135 -GSIARVLKGHKGSVTGLAFDPNGEYLA-SVDSIGTVIQWELHSGTALHILKGIAPDTGS 192

Query: 348 SY---FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP------TWS 398
                    WSP G+ +A     G +  + +  +D + E+L     + +         W 
Sbjct: 193 DLSVLNALSWSPDGETLAV---PGLRNDVVMYDRDTA-EKLFSLRGDHKFDDRICCMAWK 248

Query: 399 PSGRSLI 405
           P+G +L 
Sbjct: 249 PNGNALA 255


>gi|240974164|ref|XP_002401794.1| microtubule binding protein YTM1, putative [Ixodes scapularis]
 gi|215491058|gb|EEC00699.1| microtubule binding protein YTM1, putative [Ixodes scapularis]
          Length = 490

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 54/180 (30%), Gaps = 21/180 (11%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P   + +    FSP+ + +A  + D      V   D             ++ +L   ++ 
Sbjct: 118 PGHQEAVLVAAFSPDGRHLASGSGDT----TVRFWDIHTQTPHHTCKGHQNWVLCVTWAP 173

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP-----DSSQIVFES 320
           +GK+        +   I+  D ++       L           + P     +   +   S
Sbjct: 174 DGKKIA---SGCKNGQIFLWDPETGKQLGRTLCGHKAWITCLCWEPLHRNGECRWLA-SS 229

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKKD 379
            ++G  +++ +      Q R++          V W   G  + +T        +      
Sbjct: 230 GKDGTVRVWDVVL---GQTRLTLSGHTRAVTCVRW--GGSGLLYTASQDCTIKVWRADTG 284



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 28/190 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           + R    I   +  +L   FS +G+    S   D  +  +  D+ +      T     N 
Sbjct: 110 VTRCTASIPGHQEAVLVAAFSPDGRHLA-SGSGDTTVRFW--DIHTQTPHH-TCKGHQNW 165

Query: 306 SA--SYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDP-VWSP---Q 357
               +++PD  +I       G    Q+++       Q   +     ++     W P    
Sbjct: 166 VLCVTWAPDGKKIA-----SGCKNGQIFLWDPETGKQLGRTLCGHKAWITCLCWEPLHRN 220

Query: 358 G--DLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGD 413
           G    +A +   G    + V      Q RL +      +    W  SG  L+++  +  D
Sbjct: 221 GECRWLASSGKDGT---VRVWDVVLGQTRLTLSGHTRAVTCVRWGGSG--LLYTASQ--D 273

Query: 414 TGSKLYSIDL 423
              K++  D 
Sbjct: 274 CTIKVWRADT 283



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/148 (14%), Positives = 44/148 (29%), Gaps = 11/148 (7%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S   D  + ++  +      ER+T    +     +SPD   +   S     + + +    
Sbjct: 351 SGSDDFTLALWLPETDKKPLERMTGHQQLVNDVRFSPDMRLLASASF---DKSVKLWDGR 407

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNL 392
                   +    + +   WS    L+         + + +   K  G    L      +
Sbjct: 408 TGKFLAALRGHVKAVYQVAWSADSRLLVSGSSDSTLKLWDVSTHKIAGD---LPGHADEV 464

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               WSP G  ++       D   +L+ 
Sbjct: 465 YTVDWSPDGSQVV---SGGKDKVLRLWR 489


>gi|167580303|ref|ZP_02373177.1| hypothetical protein BthaT_19272 [Burkholderia thailandensis TXDOH]
          Length = 391

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 51/324 (15%), Positives = 94/324 (29%), Gaps = 64/324 (19%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           L V     SG     +   D D      ++ ++ +       S + + V        D  
Sbjct: 31  LLVGTYTGSGSDGIYVYRFDADSGRATPVSSAKTENPSYLVASRDGRHVYAVNELPGDAG 90

Query: 238 RVYLMD----------TRIDRAPKRIGNFRSMILAPRFSSNGKRAL---ISVQKDEAMDI 284
              +            T   +   R+ +  +       S +G+  +    SV  D     
Sbjct: 91  PASVRGGVSAFDFDAKTGALKFVNRVSSEGNDPCYLSLSPDGRYLVAANYSVASDPGGSF 150

Query: 285 YSVDLQ---------------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
               ++                +   +         S  +SPD   + F  D  G ++LY
Sbjct: 151 SVFPVEATGALGAAVLNVHHEGSGPVKGRQDGAHVHSTVFSPDGKYL-FVQD-LGVDKLY 208

Query: 330 VMQSNGSDQKRISQDKEASYF---------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +      + +    E+ Y            V+S  G     T        +     DG
Sbjct: 209 SYRYTPDGSRGLIGPTESRYTLVKAGSGPRHLVFSANGRFAYVTNELNASVDVYRYD-DG 267

Query: 381 SQERLLVEDSNLQAPTW-----------SPSGRSLIFSRKKDGDTGSKLYSIDLN----- 424
               +  E   + AP +           SP GR L ++  +       +Y+++       
Sbjct: 268 RLAHV--ETVPMTAPGFAGKVGGGALHLSPDGRFL-YATNRGDANDIVIYAVNAADGKLK 324

Query: 425 --GRNETLINTPA-YASDPQ--WV 443
             GR  +L  TP  +A DP   W+
Sbjct: 325 LVGRQSSLGKTPREFAIDPSGKWL 348


>gi|218779324|ref|YP_002430642.1| hypothetical protein Dalk_1474 [Desulfatibacillum alkenivorans AK-01]
 gi|218760708|gb|ACL03174.1| hypothetical protein Dalk_1474 [Desulfatibacillum alkenivorans AK-01]
          Length = 1319

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 64/176 (36%), Gaps = 16/176 (9%)

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-EAMDIY 285
            A A+ + +D  +V + D   +       +    +    +   G+       +D    +IY
Sbjct: 952  AKASDNPDDPWQVRIYDLENNVTVGPDSSSFDQLYPTVW---GRWCAWQDMRDTGWGEIY 1008

Query: 286  SVDLQSNATERLTNTLFINISASYSPD--SSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
              D+ +    R+T+   I+    Y PD  +  +V++ +REG+  ++    +    +R++ 
Sbjct: 1009 MTDILTGEVYRITD--SIDGQ--YRPDLGAGWLVWQDNREGQNDIFGCAVSDRKVRRLTA 1064

Query: 344  DKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPT 396
              E        S  G  I +       +   I  +         L    + +++P 
Sbjct: 1065 TDENETLP---SINGRFITYEEDSMGADTQNIRTLVLGTGAWMQLTGASTQMESPR 1117



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/153 (13%), Positives = 42/153 (27%), Gaps = 14/153 (9%)

Query: 195  VMDRDGANIRYLTPSRDQIL-FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V   D  N   + P         P      +  A+    D     +Y+ D       +  
Sbjct: 964  VRIYDLENNVTVGPDSSSFDQLYPTVW--GRWCAWQDMRDTGWGEIYMTDILTGEVYRIT 1021

Query: 254  GNFRSMILAPRFSSN--GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             +         +  +      +    ++   DI+   +      RLT T       S   
Sbjct: 1022 DSIDGQ-----YRPDLGAGWLVWQDNREGQNDIFGCAVSDRKVRRLTATDENETLPSI-- 1074

Query: 312  DSSQIVFESDREG--KEQLYVMQSNGSDQKRIS 342
            +   I +E D  G   + +  +        +++
Sbjct: 1075 NGRFITYEEDSMGADTQNIRTLVLGTGAWMQLT 1107


>gi|122879241|ref|YP_201759.6| peptidase [Xanthomonas oryzae pv. oryzae KACC10331]
          Length = 781

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 9/106 (8%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
           D +QIV+ S+R+G E LY+      +  ++I++                 + FT      
Sbjct: 375 DGAQIVWASERDGWEHLYLYDGRSGEVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 434

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSR 408
                      +  DGS    L   +      +SP G+ +  ++SR
Sbjct: 435 GEDPYDRHAYRIGLDGSGLTALTPVAADHEVRYSPDGKWMLDLYSR 480



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 50/129 (38%), Gaps = 12/129 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA-SYSPDSSQIVFESD--RE 323
           +G + + + ++D    +Y  D +S     ++T   ++          + Q+ F +   + 
Sbjct: 375 DGAQIVWASERDGWEHLYLYDGRSGEVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 434

Query: 324 GKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMK 377
           G++      Y +  +GS    ++    A+  +  +SP G  +   +++            
Sbjct: 435 GEDPYDRHAYRIGLDGSGLTALTPV--AADHEVRYSPDGKWMLDLYSRVDLGPVLELRRS 492

Query: 378 KDGSQERLL 386
            DGS  R +
Sbjct: 493 ADGSLARTV 501


>gi|312199726|ref|YP_004019787.1| hypothetical protein FraEuI1c_5933 [Frankia sp. EuI1c]
 gi|311231062|gb|ADP83917.1| WD40 repeat, subgroup [Frankia sp. EuI1c]
          Length = 566

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 11/117 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALIS 275
            F+P+ + +A A+ D      V L D  I  +P+ +        + A  FS +G+    +
Sbjct: 453 SFTPDGRTLATASIDK----WVRLWDVSIPSSPRLLIAMGQPGEMWAAAFSRDGQTLAAA 508

Query: 276 VQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              D A+ ++ V    +     + LT         ++ PD   +V  S R+G  QL+
Sbjct: 509 GT-DGAIRLWDVSHPESPKAFDKALTGHNDTVTKLAFFPDGHTLV-SSSRDGTVQLW 563



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 75/215 (34%), Gaps = 17/215 (7%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK--RIGNFRSMILAPRFSSN 268
           +  ++   F+P    +   + D + +LR++ +    +  P           + +  F+ +
Sbjct: 350 NDPVWVVGFTPAGNLL--VSGDHKHMLRMWNVSDPNNPVPLGGPFDGTSGEVWSVGFTPD 407

Query: 269 GKRALISVQKDEAMDIYSVD-------LQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           G     +  +D ++ ++          L      + T       S S++PD   +   + 
Sbjct: 408 GSLLA-TGGQDGSVGLWDTSNPHQQPHLVGKLPIQTTTGTKAIESVSFTPDGRTLA-TAS 465

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +   +L+ +    S +  I+  +    +   +S  G  +A     G      V   +  
Sbjct: 466 IDKWVRLWDVSIPSSPRLLIAMGQPGEMWAAAFSRDGQTLAAAGTDGAIRLWDVSHPESP 525

Query: 382 ---QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
               + L   +  +    + P G +L+ S  +DG 
Sbjct: 526 KAFDKALTGHNDTVTKLAFFPDGHTLV-SSSRDGT 559



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 78/257 (30%), Gaps = 41/257 (15%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM----- 259
                    ++    +PN + +A A+        V + D      P  + + R+      
Sbjct: 246 QPLTDAGGEVWWVSVTPNGRTLAAASEKG----TVPIWDVSRPAKPSLLTSLRAGDGQGV 301

Query: 260 ---ILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATERLTNTLFINISASY----SP 311
               ++  F+  G     +  ++  + ++ + D  S            +    +    +P
Sbjct: 302 TEGTMSVAFAPGGLTLA-TGSRNGTVQLWNTSDPSSVQPRGGPLVGATDNDPVWVVGFTP 360

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS----PQGDLIAFTKFS 367
             + +V     + K  L +   +  +               VWS    P G L+A     
Sbjct: 361 AGNLLV---SGDHKHMLRMWNVSDPNNPVPLGGPFDGTSGEVWSVGFTPDGSLLATGGQD 417

Query: 368 GEKFAIGVMKKDGS----------QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G    +G+                  +       +++ +++P GR+L  +     D   +
Sbjct: 418 GS---VGLWDTSNPHQQPHLVGKLPIQTTTGTKAIESVSFTPDGRTLATASI---DKWVR 471

Query: 418 LYSIDLNGRNETLINTP 434
           L+ + +      LI   
Sbjct: 472 LWDVSIPSSPRLLIAMG 488


>gi|301769815|ref|XP_002920325.1| PREDICTED: apoptotic protease-activating factor 1-like isoform 2
           [Ailuropoda melanoleuca]
          Length = 1238

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 73/221 (33%), Gaps = 25/221 (11%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       ++   FS + Q++A    D      + +           I      +L  
Sbjct: 597 RLVVRPHTDAVYHACFSEDGQRIASCGVDK----TLQVFKAETGEKLLEIKAHEDEVLCC 652

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS++ +    +   D+ + I+  +  +     + +     ++  +  ++S  +  +   
Sbjct: 653 AFSTDDRFIA-TCSVDKKVKIW--NSMTGELVHIYDEHSEQVNCCHFTNNSHYLLLATAS 709

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L +   N  + +        S     +SP   L+A     G    + +     + E
Sbjct: 710 SDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGT---LKLWDVKSANE 766

Query: 384 R--LLVEDS--NLQAP-----------TWSPSGRSLIFSRK 409
           R  + V+    N + P           +WSP G  ++ + K
Sbjct: 767 RKSINVKQFFLNSEEPQEDMEVIVKCCSWSPDGARIMVAAK 807


>gi|301769813|ref|XP_002920324.1| PREDICTED: apoptotic protease-activating factor 1-like isoform 1
           [Ailuropoda melanoleuca]
          Length = 1250

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 73/221 (33%), Gaps = 25/221 (11%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       ++   FS + Q++A    D      + +           I      +L  
Sbjct: 609 RLVVRPHTDAVYHACFSEDGQRIASCGVDK----TLQVFKAETGEKLLEIKAHEDEVLCC 664

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS++ +    +   D+ + I+  +  +     + +     ++  +  ++S  +  +   
Sbjct: 665 AFSTDDRFIA-TCSVDKKVKIW--NSMTGELVHIYDEHSEQVNCCHFTNNSHYLLLATAS 721

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L +   N  + +        S     +SP   L+A     G    + +     + E
Sbjct: 722 SDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGT---LKLWDVKSANE 778

Query: 384 R--LLVEDS--NLQAP-----------TWSPSGRSLIFSRK 409
           R  + V+    N + P           +WSP G  ++ + K
Sbjct: 779 RKSINVKQFFLNSEEPQEDMEVIVKCCSWSPDGARIMVAAK 819


>gi|281353746|gb|EFB29330.1| hypothetical protein PANDA_009041 [Ailuropoda melanoleuca]
          Length = 1250

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 73/221 (33%), Gaps = 25/221 (11%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       ++   FS + Q++A    D      + +           I      +L  
Sbjct: 609 RLVVRPHTDAVYHACFSEDGQRIASCGVDK----TLQVFKAETGEKLLEIKAHEDEVLCC 664

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS++ +    +   D+ + I+  +  +     + +     ++  +  ++S  +  +   
Sbjct: 665 AFSTDDRFIA-TCSVDKKVKIW--NSMTGELVHIYDEHSEQVNCCHFTNNSHYLLLATAS 721

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L +   N  + +        S     +SP   L+A     G    + +     + E
Sbjct: 722 SDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGT---LKLWDVKSANE 778

Query: 384 R--LLVEDS--NLQAP-----------TWSPSGRSLIFSRK 409
           R  + V+    N + P           +WSP G  ++ + K
Sbjct: 779 RKSINVKQFFLNSEEPQEDMEVIVKCCSWSPDGARIMVAAK 819


>gi|229112315|ref|ZP_04241854.1| hypothetical protein bcere0018_45560 [Bacillus cereus Rock1-15]
 gi|228671155|gb|EEL26460.1| hypothetical protein bcere0018_45560 [Bacillus cereus Rock1-15]
          Length = 356

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/224 (13%), Positives = 73/224 (32%), Gaps = 34/224 (15%)

Query: 214 LFEPRFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           ++ P++S + + + Y   D+   +  L +Y  + +I+  P      R +    ++S N  
Sbjct: 1   MYSPKWSYDGRFIGYIDSDEAGKKSNLFIYDTEEKINYQP----YVRVVTSDFKWSPNKN 56

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------EG 324
           +   +    +   +    +++   +   N         + P+  + +  S         G
Sbjct: 57  QLAYT----DQGLLNVTKIKNGRPQGFKNVSLGVSDFEWFPNGKEFIVSSQSCLRPTGWG 112

Query: 325 KEQLYVMQSNG-----------SDQKRISQDKEASYFDPVWSPQGDLIAF-----TKFSG 368
              LY +  +            + Q   +     +     WS  G  I+F        + 
Sbjct: 113 SIPLYKIPVDANLAKDKIKPFYTIQTNETDLFAINANYFKWSSDGKWISFLASPTASLAM 172

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKD 411
           +   + V+   G   R +      +    W+PS   L +   + 
Sbjct: 173 DSNTLCVISSKGKHFRTIGNMLWFKDWMKWAPSANQLAYISGEG 216



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 53/308 (17%), Positives = 107/308 (34%), Gaps = 55/308 (17%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
             K  ++ R +   +S  +G   N   +   D        P    +  + ++SPN+ ++A
Sbjct: 3   SPKWSYDGRFIGYIDSDEAGKKSN---LFIYDTEEKINYQPYVRVVTSDFKWSPNKNQLA 59

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------KDEA 281
           Y      ++ ++       +  P+   N    +    +  NGK  ++S Q         +
Sbjct: 60  YTDQGLLNVTKIK------NGRPQGFKNVSLGVSDFEWFPNGKEFIVSSQSCLRPTGWGS 113

Query: 282 MDIYSVDLQSNATE-RL----------TNTLFINIS-ASYSPDSSQIVF-----ESDREG 324
           + +Y + + +N  + ++          T+   IN +   +S D   I F      S    
Sbjct: 114 IPLYKIPVDANLAKDKIKPFYTIQTNETDLFAINANYFKWSSDGKWISFLASPTASLAMD 173

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSGE------KFAIGVM 376
              L V+ S G   + I       +F     W+P  + +A+    G       KF +  M
Sbjct: 174 SNTLCVISSKGKHFRTI---GNMLWFKDWMKWAPSANQLAYISGEGRFFVENKKFTVADM 230

Query: 377 KKDGSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKDGDTGSK---------LYSIDLNGR 426
                Q+             W SP+   ++ +R K+     +         LY I++   
Sbjct: 231 VTTKQQKEYTPVGYVDLDLEWLSPN--KVVVARAKENKAWKEGSVPTMFTTLYMINIKTE 288

Query: 427 NETLINTP 434
            +  I+ P
Sbjct: 289 EQRQISFP 296


>gi|198476675|ref|XP_001357436.2| GA14445 [Drosophila pseudoobscura pseudoobscura]
 gi|198137804|gb|EAL34505.2| GA14445 [Drosophila pseudoobscura pseudoobscura]
          Length = 317

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 72/184 (39%), Gaps = 16/184 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +S +SG +  +L + D    N + L      +   P  + + + + +A   + + +++
Sbjct: 120 VEDSFLSGSLDKTLRLWDLRSPNCQGLMH----LSGRPIAAYDPEGLIFAAGVNSESIKL 175

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
           Y +   D       K            +FS +GK  LIS        I  VD       +
Sbjct: 176 YDLRSFDKGPFITFKLNQEKECDWTGLKFSRDGKTILISTN---GSVIRLVDAFHGTPLQ 232

Query: 296 RLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             T   N   + I AS+SPD SQ +F    +G+  ++   + G+    ++ D        
Sbjct: 233 TFTGYPNNKGLAIEASFSPD-SQFIFSGSTDGRVHIWNADT-GNKISVLNGDHPGPVQCI 290

Query: 353 VWSP 356
            ++P
Sbjct: 291 QFNP 294


>gi|195582298|ref|XP_002080965.1| GD25948 [Drosophila simulans]
 gi|194192974|gb|EDX06550.1| GD25948 [Drosophila simulans]
          Length = 704

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 68/213 (31%), Gaps = 19/213 (8%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           DR G   R L       ++   F+P    +   + D      + L               
Sbjct: 437 DRSGEVTRSLM-GHTGPVYRCAFAPEMNLLLSCSEDS----TIRLWSLLTWSCVVTYRGH 491

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQ 315
              +   RF+ +G    +S   D+   +++ D  SN   R+      ++    + P+S+ 
Sbjct: 492 VYPVWDVRFAPHG-YYFVSCSYDKTARLWATD--SNQALRVFVGHLSDVDCVQFHPNSNY 548

Query: 316 IVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +    SDR     + +  +      R+    + S     +S  G  +A          I 
Sbjct: 549 VATGSSDRT----VRLWDNLTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVD---HNII 601

Query: 375 VMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
           +           LL   S + + T+S  G  L 
Sbjct: 602 IWDLSNGSLVTTLLRHTSTVTSITFSRDGTVLA 634



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 10/127 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L   D + A   ++    D    +  F PN   VA  + D      V L D    ++ +
Sbjct: 517 RLWATDSNQALRVFVGHLSDVDCVQ--FHPNSNYVATGSSDR----TVRLWDNLTGQSVR 570

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYS 310
            +   +  + +  FS+ G+    S   D  + I+  DL + +    L        S ++S
Sbjct: 571 LMTGHKGSVSSLAFSACGRYLA-SGSVDHNIIIW--DLSNGSLVTTLLRHTSTVTSITFS 627

Query: 311 PDSSQIV 317
            D + + 
Sbjct: 628 RDGTVLA 634


>gi|159036253|ref|YP_001535506.1| peptidase S9 prolyl oligopeptidase [Salinispora arenicola CNS-205]
 gi|157915088|gb|ABV96515.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Salinispora arenicola CNS-205]
          Length = 623

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 43/127 (33%), Gaps = 8/127 (6%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           ++       G ++  L  +  DG+    +  +    L  PR SP+  +VA+  ++  D+ 
Sbjct: 130 VWCVRETTGGEVRRDLVALPLDGSARIRVLAATHDFLSGPRISPDGGRVAWLGWNHPDMP 189

Query: 238 RVYLMDTRIDRAP--------KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                    +  P        +        +    ++S+G   L+   +    +++ V  
Sbjct: 190 WTRTAVMVANVDPDGSLVGLRRLATGADESVTQIEWTSDGAALLVVSDRSGWWNVHEVSG 249

Query: 290 QSNATER 296
                 R
Sbjct: 250 DGRWRAR 256



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 80/261 (30%), Gaps = 38/261 (14%)

Query: 144 FFSSPASWRKI----AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD 199
           + S P+ W+       H++ D +        G   S + +V+     G  +N L     D
Sbjct: 7   YGSWPSGWQAADASRGHSVVDWV--------GFAGSEVWWVAADAGDG--RNHLVRPGAD 56

Query: 200 GANIRYLTPSRD------QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
           G     L    D      +    P          +  + D+ + R +  +  +     R 
Sbjct: 57  GRPEDVLPGDWDVRTAFMEYGGRPWVFLGTGGAVFVHWSDQRVYR-WTPEAAVRPLSPRS 115

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEA---MDIYSVDLQSNATER-LTNTLFINISASY 309
             +R    A R    G       +        D+ ++ L  +A  R L  T         
Sbjct: 116 DRYRYCDFAVR----GDEVWCVRETTGGEVRRDLVALPLDGSARIRVLAATHDFLSGPRI 171

Query: 310 SPDSSQIVFES----DREGKEQLYVM---QSNGS--DQKRISQDKEASYFDPVWSPQGDL 360
           SPD  ++ +      D        ++     +GS    +R++   + S     W+  G  
Sbjct: 172 SPDGGRVAWLGWNHPDMPWTRTAVMVANVDPDGSLVGLRRLATGADESVTQIEWTSDGAA 231

Query: 361 IAFTKFSGEKFAIGVMKKDGS 381
           +         + +  +  DG 
Sbjct: 232 LLVVSDRSGWWNVHEVSGDGR 252


>gi|58266314|ref|XP_570313.1| transcription factor [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57226546|gb|AAW43006.1| transcription factor, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 550

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 79/245 (32%), Gaps = 41/245 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +     +++      P+  ++A  ++D +  +     MD R+        N    +    
Sbjct: 107 ILKDHTKVVSALAVDPSGARIATGSHDYDTKLWDFGGMDHRLKPFKSFEANGNYYVHDLS 166

Query: 265 FSSNGKRALI--------SVQKDEAM-------DIYSVDLQSNATERLTNTLFINISA-S 308
           +S +G++ L+           ++          D+Y  D+++      TN     I+A +
Sbjct: 167 YSPDGQQLLVISGTVHPKVFNRNGEDEMEFNKGDVYLRDMKN------TNGHTAEINAGA 220

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-----QDKEASYFDPVWSPQGDLIAF 363
           + P    I      +   +++   +    ++ I      +          WSP G  IA 
Sbjct: 221 WHPTDKSIFLTCSNDSTLRIWDTSNKRKQKQVIVVKSKERGARTKVTACAWSPDGKWIAG 280

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE-------DSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
               G    + +     +  R           ++      +S  G  +     + GD   
Sbjct: 281 VCLDGT---LHIWDTSSNFARPKYSCENAHPKNTETTGVAFSRDGLRVA---TRGGDDTV 334

Query: 417 KLYSI 421
           KL+ I
Sbjct: 335 KLWDI 339


>gi|21241036|ref|NP_640618.1| dipeptidyl anminopeptidase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21106328|gb|AAM35154.1| dipeptidyl anminopeptidase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 691

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 61/172 (35%), Gaps = 13/172 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLF---INISASYSPDSSQIVFE 319
             S +GK        +  ++++   + + +    +T        N   +Y P+   +++ 
Sbjct: 60  SISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPN--TLLYL 117

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIG 374
            D  G E   L+ +       K ++  K+ +      S   P+  ++       +   + 
Sbjct: 118 RDNGGDEDFHLFSVNLTDGSSKDLTPFKKTNAEVYRVSAQHPESIMVGMNDRDAKWHDLY 177

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSIDLNG 425
            +     + R LV+ +      +   G   L ++ +   D G +L   D +G
Sbjct: 178 RVDLASGK-RTLVQKNTGSLDAYLLDGGYQLRYATRATDDAGRELLVPDGDG 228



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 51/140 (36%), Gaps = 10/140 (7%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKF 366
           S SPD   + + +  EG   ++V   +  DQ R I++D      +  W+ Q + + + + 
Sbjct: 60  SISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPNTLLYLRD 119

Query: 367 SGE--KFAIGVMKKDGSQERLLVEDSNLQAPTW-----SPSGRSLIFSRKKDGDTGSKLY 419
           +G    F +  +       + L       A  +      P   S++            LY
Sbjct: 120 NGGDEDFHLFSVNLTDGSSKDLTPFKKTNAEVYRVSAQHP--ESIMVGMNDRDAKWHDLY 177

Query: 420 SIDLNGRNETLINTPAYASD 439
            +DL     TL+     + D
Sbjct: 178 RVDLASGKRTLVQKNTGSLD 197



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 8/94 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDS----NLQAPTWSP 399
                 +   SP G  +++         + V   D   Q R + +D+         T+ P
Sbjct: 52  GNPERANVSISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQP 111

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
           +  +L++ R   GD    L+S++L +G ++ L  
Sbjct: 112 N--TLLYLRDNGGDEDFHLFSVNLTDGSSKDLTP 143


>gi|261822719|ref|YP_003260825.1| 6-phosphogluconolactonase [Pectobacterium wasabiae WPP163]
 gi|261606732|gb|ACX89218.1| 6-phosphogluconolactonase [Pectobacterium wasabiae WPP163]
          Length = 386

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 62/211 (29%), Gaps = 17/211 (8%)

Query: 219 FSPNQQKV--AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALIS 275
           +S   Q V   Y +   +  + VY ++T+               + P   S + K  L +
Sbjct: 28  WSMGAQAVTAVYVSAATDGAIDVYTLNTQSGELTAIGKAAAGAKVMPLAVSPD-KSFLYA 86

Query: 276 VQKD--EAMDIYSVDLQSNATERLTNTLFINISASYSPD--SSQIVFESDREGKEQLYVM 331
             +    +   Y +D +S     L      +  A  S D     +   S    K  +  +
Sbjct: 87  ATRGIPYSAVSYKIDAKSGVLSPLGKAELPDSMAYISTDLTGKWLFSASYGGNKIAVNGI 146

Query: 332 QSNGS-DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQER----- 384
             +G  +   ++          + + + +   F    G    +                 
Sbjct: 147 DKDGKVNASAVTVVPTGEKAHSIIADRKNKFVFASNLGSDQIVQFRFDAKTGTLTPNELA 206

Query: 385 --LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
              L   +  +   +SP  ++L  S +  G 
Sbjct: 207 EIKLPGGNGPRHLVFSPDNKTLYVSNELSGK 237



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 37/303 (12%), Positives = 88/303 (29%), Gaps = 63/303 (20%)

Query: 76  SDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV---IKEGKDRLRVEFRLWD 132
           S V + + +      +    +               +TG+       G +++ V      
Sbjct: 104 SGVLSPLGKAELPDSMAYISTD--------------LTGKWLFSASYGGNKIAVNG---- 145

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTI-SDDIYQSITGEKGDFNSRILFVSESVVSGIIKN 191
           +    ++        P    + AH+I +D   + +       +  + F  ++    +  N
Sbjct: 146 IDKDGKVNASAVTVVPTG--EKAHSIIADRKNKFVFASNLGSDQIVQFRFDAKTGTLTPN 203

Query: 192 SLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV-------YLMD 243
            L  +   G N  R+L            FSP+ + +  +      + R+        L  
Sbjct: 204 ELAEIKLPGGNGPRHLV-----------FSPDNKTLYVSNELSGKVARLALDEKTGQLTL 252

Query: 244 TRIDRAPKRIGNFRSMILAPR----------FS------SNGKRALISVQKDEAMDIYSV 287
                        R+  + P           +S       NGK   +S +    + +  V
Sbjct: 253 LDYTDTVPAEAGMRAGTITPDKNNADSRPQIWSADLRLTPNGKFLYVSERTKSTITLLRV 312

Query: 288 DLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + ++   + +T               P    ++   ++     +Y +  +  D  R+ Q 
Sbjct: 313 EPKTGQLKYITRYP-TETQPRGIQIDPSGKFLIASGEKSTSLSVYRINQDNGDLVRVGQY 371

Query: 345 KEA 347
              
Sbjct: 372 PTG 374


>gi|118763708|gb|AAI28481.1| Pwp2 protein [Mus musculus]
          Length = 877

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/214 (14%), Positives = 75/214 (35%), Gaps = 19/214 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N+ +     DQ +     + +   +A+       +L V+   +      K+ G+F SM+
Sbjct: 320 FNLIHSLSISDQRVASVAINSSGDWIAFGCSGMGQLL-VWEWQSE-SYVLKQQGHFNSMV 377

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTL--FINISASYSPDSS 314
            A  +S +G+  + +   D  +  + +    + ++  + R T      ++ S       +
Sbjct: 378 -ALAYSPDGQYIV-TSSLDGTVRAFDLHRYRNFRTFTSPRPTQFSCVAVDSSGEIVSAGA 435

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           Q  F        +++V          +    E       ++P   ++A   +        
Sbjct: 436 QDSF--------EIFVWSMQTGRLLDVLSGHEGPVSGLCFNPMKSILASASWDKTVRLWD 487

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           +     ++E  L   S+  A T+ P G  L  + 
Sbjct: 488 MFDSWRTKET-LTLTSDALAVTFRPDGAELAVAT 520


>gi|163848421|ref|YP_001636465.1| WD-40 repeat-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222526346|ref|YP_002570817.1| WD-40 repeat-containing protein [Chloroflexus sp. Y-400-fl]
 gi|163669710|gb|ABY36076.1| WD-40 repeat protein [Chloroflexus aurantiacus J-10-fl]
 gi|222450225|gb|ACM54491.1| WD-40 repeat protein [Chloroflexus sp. Y-400-fl]
          Length = 1161

 Score = 47.7 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 32/220 (14%), Positives = 68/220 (30%), Gaps = 21/220 (9%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +AY       ++    +          +  F + +     S +G    +    D    + 
Sbjct: 739 LAYTPAGTLALIEETRLIETNGEDSTVLTTFGTPLNDLYLSPDG-FLALVAANDGNEYVI 797

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           S+         L           + P   ++V  S  +G  + +    + SD +  +   
Sbjct: 798 SLS-NGKIITVLRGHTDQISQTRWLPGGQEVVTASF-DGTVRFW----DVSDLQWFAPTA 851

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSL 404
            A+     W             GE   I +  +  +  R LL   + ++   +SP GR L
Sbjct: 852 LAADPQRGW---------VAVGGENGRIALFTRPNTPARPLLHHTAAIEMLAFSPDGRWL 902

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                   D    ++ +  +GR + +I   A   +  +  
Sbjct: 903 A---AAGADAQVSVWDV-ASGRLQAVIEHRARVRNVAFSA 938



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 85/228 (37%), Gaps = 28/228 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S N++  A A    +D+  V L++    +  +R+  F   + A  FS +G +   +V 
Sbjct: 557 AVSQNERWWAAAVSPADDLAEVVLVERSTGQM-QRLATFAINVSAIAFSPDGAKLA-AVT 614

Query: 278 KDEAMDIYSVDLQSNATERL-----TNTLFINISA-------SYSPDSSQIVFESDREGK 325
            D  + I++  L  +  ERL     T ++  +          ++SPD   + + +  +G 
Sbjct: 615 WDGTILIWNT-LSPDQPERLWHPLATQSIPPDDPLAVRFLAVAFSPDGQTL-YTTGYDGW 672

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             L         Q  +   +          P G  IA     G +  I  M+      R 
Sbjct: 673 --LRRWDLATRRQIVMGGIEGVPLRSLTIDPAGVRIAAASQEG-QVLIWRMRDGELVGRA 729

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           ++    + A  ++P+G   +    +          I+ NG + T++ T
Sbjct: 730 VLSGQPIAALAYTPAGTLALIEETR---------LIETNGEDSTVLTT 768



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 50/165 (30%), Gaps = 19/165 (11%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I  +       + + R+ P  Q+V  A++D    +R + +      AP  +         
Sbjct: 804 IITVLRGHTDQISQTRWLPGGQEVVTASFD--GTVRFWDVSDLQWFAPTALAADPQRGWV 861

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
                NG+ AL +                     L +        ++SPD   +      
Sbjct: 862 AVGGENGRIALFTRPN-------------TPARPLLHHTAAIEMLAFSPDGRWLAAA--- 905

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
               Q+ V        + +  +  A   +  +S  G L+  +  +
Sbjct: 906 GADAQVSVWDVASGRLQAVI-EHRARVRNVAFSADGSLLLTSSRT 949


>gi|327265127|ref|XP_003217360.1| PREDICTED: u3 small nucleolar RNA-associated protein 18 homolog
           [Anolis carolinensis]
          Length = 522

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 62/176 (35%), Gaps = 24/176 (13%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINISASYS 310
            N  ++   P       + +++   D ++ ++ VD  +N   +   L N       A +S
Sbjct: 218 ANLTTVQFHPS-----AQVVMTAGLDRSVSLFQVDAVTNPKIQSIHLENFPIY--KACFS 270

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK---EASYFDPVWSPQGDLIAFTKFS 367
            D  Q++  S R   +  Y+    G     ++  +   E +      SP G  +  +  S
Sbjct: 271 ADGEQVIATSTR--NKLFYIYDMMGGKIIPVNHVRGLEEKTVRKFEVSPDGKFLLVSGTS 328

Query: 368 GEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           G    I  MK        ++   +    A T+SP G  +       G     ++ +
Sbjct: 329 GYLHLI-TMKTKEFVGSMKI---NGKAAASTFSPDGSKIY---THSGMGEVFIWDV 377



 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 58/162 (35%), Gaps = 13/162 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           +  +++  FS + ++V   +  ++      +M  +I       G     +     S +GK
Sbjct: 261 NFPIYKACFSADGEQVIATSTRNKLFYIYDMMGGKIIPVNHVRGLEEKTVRKFEVSPDGK 320

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQ 327
             L+S      + + ++      T+    ++ IN  A   ++SPD S+I       G  +
Sbjct: 321 FLLVSGT-SGYLHLITM-----KTKEFVGSMKINGKAAASTFSPDGSKIY---THSGMGE 371

Query: 328 LYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +++          R + +          S     +A    SG
Sbjct: 372 VFIWDVKSRRCLNRFTDEGCLRGTSITVSKNSQYVACGSSSG 413


>gi|324998246|ref|ZP_08119358.1| peptidase S9, prolyl oligopeptidase [Pseudonocardia sp. P1]
          Length = 640

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/237 (14%), Positives = 80/237 (33%), Gaps = 17/237 (7%)

Query: 211 DQILFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           D     P  SP+  ++AY A       + V  +D   D A     + R  I    ++ + 
Sbjct: 23  DPEFGSPSLSPDGTRIAYLAPAHGRRNVWVRGIDETHDDAVCVTHDTRRGITTHLWTDDP 82

Query: 270 KRALISVQKDEAMD--IYSVDLQSNATERLTNTLFINISASYSPD------SSQIVFESD 321
           +  L     D   D  ++ VDL +     +  T     S  ++ D       + I + + 
Sbjct: 83  RWLLYLQDTDGNEDWHLHRVDLDAPDEPAVDLTPMDPGSRVFAADPETTVPGTVIAWMNP 142

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDG 380
           R     ++ +     ++  + +  + +    V    G    F        + +     + 
Sbjct: 143 RPLYVDVFRIDVATGERTPLVERTDPAETFLV-DRTGRASWFVSQDADGTYELAAADPET 201

Query: 381 SQERLLVEDSNLQAPT--WS---PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
               ++      + P   ++   P G +++    +D D   +L  +D     +T++ 
Sbjct: 202 GSRHVVHRAGGPEHPMGLFAVPTPDGSAVLVGDYQDSD-DLRLLRVDRTTGEQTVLA 257



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 11/111 (9%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV--MKKDGSQERLLVEDSNLQAPT--W 397
           S   +  +  P  SP G  IA+   +  +  + V  + +       +  D+     T  W
Sbjct: 19  SFFADPEFGSPSLSPDGTRIAYLAPAHGRRNVWVRGIDETHDDAVCVTHDTRRGITTHLW 78

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN----TPA---YASDPQ 441
           +   R L++ +  DG+    L+ +DL+  +E  ++     P    +A+DP+
Sbjct: 79  TDDPRWLLYLQDTDGNEDWHLHRVDLDAPDEPAVDLTPMDPGSRVFAADPE 129



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 68/192 (35%), Gaps = 16/192 (8%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTNT--LFINISASYSPDSSQIV 317
           +P  S +G R           +++   +D   +    +T+     I  +  ++ D   ++
Sbjct: 28  SPSLSPDGTRIAYLAPAHGRRNVWVRGIDETHDDAVCVTHDTRRGI-TTHLWTDDPRWLL 86

Query: 318 FESDREGKE--QLYVMQSNGSDQKRI-----SQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +  D +G E   L+ +  +  D+  +              DP  +  G +IA+       
Sbjct: 87  YLQDTDGNEDWHLHRVDLDAPDEPAVDLTPMDPGSRVFAADPETTVPGTVIAWMNPRPLY 146

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             +  +     +   LVE ++    T+     GR+  F   +D D   +L + D    + 
Sbjct: 147 VDVFRIDVATGERTPLVERTDPAE-TFLVDRTGRASWFVS-QDADGTYELAAADPETGSR 204

Query: 429 TLINTPAYASDP 440
            +++       P
Sbjct: 205 HVVHRAGGPEHP 216



 Score = 36.5 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 8/68 (11%)

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID--------LNGRNETLINTPAYAS 438
             D    +P+ SP G  + +     G     +  ID        +       I T  +  
Sbjct: 21  FADPEFGSPSLSPDGTRIAYLAPAHGRRNVWVRGIDETHDDAVCVTHDTRRGITTHLWTD 80

Query: 439 DPQWVGFM 446
           DP+W+ ++
Sbjct: 81  DPRWLLYL 88


>gi|242093118|ref|XP_002437049.1| hypothetical protein SORBIDRAFT_10g019730 [Sorghum bicolor]
 gi|241915272|gb|EER88416.1| hypothetical protein SORBIDRAFT_10g019730 [Sorghum bicolor]
          Length = 912

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 57/181 (31%), Gaps = 17/181 (9%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSN 292
            D   + L+ T  +   K +   +  +    F             D    +   DL    
Sbjct: 130 GDDDGIKLIATIDNTISKVLKGHKGSVTGLAFDPKNDYLA---SVDSFGTVIYWDLCIGG 186

Query: 293 ATERLT-------NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQD 344
               LT       +   +     +SPD   +     R     + +   +  ++   +  D
Sbjct: 187 EVRTLTRVAPTFRSDNSVRNVLCWSPDGQTLAVPGLR---NNVVLYDRDTGEEVCTLYGD 243

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            E       WSP G  +A +     +  I  +K     ER   +D  + +  W P+G +L
Sbjct: 244 HEQPVSSLCWSPNGRYLA-SAGLDRQVLIWDVKSRQDIERQKFDD-RICSLAWKPNGNAL 301

Query: 405 I 405
           +
Sbjct: 302 L 302


>gi|260950653|ref|XP_002619623.1| hypothetical protein CLUG_00782 [Clavispora lusitaniae ATCC 42720]
 gi|238847195|gb|EEQ36659.1| hypothetical protein CLUG_00782 [Clavispora lusitaniae ATCC 42720]
          Length = 942

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/274 (16%), Positives = 86/274 (31%), Gaps = 38/274 (13%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRD--GANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
             + +I+ + E              + D     +R    + D  + +  +SP+   +   
Sbjct: 45  ASDDKIVLIWEKDDDQNRPKQFGETEADLEHWTVRKRLVAHDNDVQDISWSPDGALLISV 104

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-- 287
             D      + +         KR    +SM+    F     +  ++   D  + I+    
Sbjct: 105 GLDR----SIIIWSGTTFERIKRYDIHQSMVKGIVFDP-ANKFFVTASDDRTVRIFRYYR 159

Query: 288 ---DLQSNA----TERLTNTL-------FINISASYSPDSSQIVFESDREGKEQLYVMQS 333
              D+ S+      E++                 S+SPD   I   +   G     V+ +
Sbjct: 160 KFNDVSSSNYEFQMEQIIMDPFKKSPLTSYFRRMSWSPDGQHIAVPNATNGPVTSVVIIN 219

Query: 334 NGSDQKRISQ-DKEASYFDPVWSPQ----------GDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G+    +S    EA      +SP+            L       G+   + +     ++
Sbjct: 220 RGNWATDVSLIGHEAPCEVCSFSPRIFRLDKSAKTEKLTTILASGGQDRTLAIWSTALTR 279

Query: 383 ERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGD 413
             ++ ED    + T   WSP G SL F    DG 
Sbjct: 280 PLVVAEDIVQNSITDICWSPDGESL-FLSALDGS 312



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 68/199 (34%), Gaps = 36/199 (18%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF----------- 302
                ++   +FS +G+    S   D+ + I+  D   N  ++   T             
Sbjct: 24  TRHNGVVTCVKFSPDGRFLA-SASDDKIVLIWEKDDDQNRPKQFGETEADLEHWTVRKRL 82

Query: 303 ----INISA-SYSPDSSQIVFES-DRE-----GK--EQLYVMQSNGSDQKRISQDKEASY 349
                ++   S+SPD + ++    DR      G   E++     + S  K I  D  A+ 
Sbjct: 83  VAHDNDVQDISWSPDGALLISVGLDRSIIIWSGTTFERIKRYDIHQSMVKGIVFD-PANK 141

Query: 350 FDPVWSPQGDLIAF--------TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           F    S    +  F           S  +F +  +  D  ++  L   S  +  +WSP G
Sbjct: 142 FFVTASDDRTVRIFRYYRKFNDVSSSNYEFQMEQIIMDPFKKSPLT--SYFRRMSWSPDG 199

Query: 402 RSLIFSRKKDGDTGSKLYS 420
           + +      +G   S +  
Sbjct: 200 QHIAVPNATNGPVTSVVII 218



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 78/227 (34%), Gaps = 40/227 (17%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYD-------------DEDILRVYLMDTRIDRAPKRI 253
               + ++   +FSP+ + +A A+ D                       D       KR+
Sbjct: 23  MTRHNGVVTCVKFSPDGRFLASASDDKIVLIWEKDDDQNRPKQFGETEADLEHWTVRKRL 82

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYS 310
               + +    +S +G   LISV  D ++ I+S        ER+        +     + 
Sbjct: 83  VAHDNDVQDISWSPDGA-LLISVGLDRSIIIWS----GTTFERIKRYDIHQSMVKGIVFD 137

Query: 311 PDSSQIVFESDREGKEQLYVM-----QSNGSD----QKRISQDKE-----ASYFDP-VWS 355
           P +   V  SD +   +++         + S+     ++I  D        SYF    WS
Sbjct: 138 PANKFFVTASD-DRTVRIFRYYRKFNDVSSSNYEFQMEQIIMDPFKKSPLTSYFRRMSWS 196

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSP 399
           P G  IA    +       V+   G   +   L+  ++  +  ++SP
Sbjct: 197 PDGQHIAVPNATNGPVTSVVIINRGNWATDVSLIGHEAPCEVCSFSP 243


>gi|269838365|ref|YP_003320593.1| hypothetical protein Sthe_2350 [Sphaerobacter thermophilus DSM
           20745]
 gi|269787628|gb|ACZ39771.1| hypothetical protein Sthe_2350 [Sphaerobacter thermophilus DSM
           20745]
          Length = 968

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 52/344 (15%), Positives = 102/344 (29%), Gaps = 47/344 (13%)

Query: 111 LVTGRVIKEGKDRLRVEFRLWD--VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
           L TG V + G D   +  +  D  V   +    + +              +     S T 
Sbjct: 638 LRTGPVSRPGPDSYTLILQGGDRSVVRSRSGQPEWWLDGATDLNWFGSEPALLGVASATP 697

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              D  SR+       +         V +    +   +   + +    P  +P+ + VA+
Sbjct: 698 GSPDGPSRLALYPAPPLLAQTPGFEAV-EYQRFDPAGIGDDQTRRYAHPLAAPDGRTVAF 756

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
              D+ D   V L     D  P+ + ++     A     +G+   ++   D    +Y+V 
Sbjct: 757 FVVDEADG-NVALWLAGWDLPPREVAHWPGATQA-----DGRVPPVATWTDAGTLVYAVP 810

Query: 289 --LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
              +    +R+T                     + R+ +    +        + +     
Sbjct: 811 EAWREGLPQRVTLYR-----------------VTLRDAEPTPVLTLRAHGADRGV----- 848

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK------DGSQERLLVEDSNLQAPTWSPS 400
            +  D   +P G  +A+                     D +Q          +   WSP 
Sbjct: 849 -AVTDLAAAPDGAWLAYRVRHFGTGGAAADSLHLAPAHDVTQALEAARGEAAEGMAWSPD 907

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD-PQWV 443
           GR L            ++  +  +GR    +  PA A+  P WV
Sbjct: 908 GRWLA------AALDDRVLLLTADGRTTVPLTGPATAASYPLWV 945



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 16/137 (11%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           +P S R     +SDD   ++T   G++  R           + +  +  + RDG  +RYL
Sbjct: 432 APDSSRVYLSLLSDD---AVTPPGGEWTQR-------EPRFVQRIDVAALHRDGT-VRYL 480

Query: 207 TPSRDQILFEP-RFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           T        EP   SP+ Q+V Y  +D             +        +++        
Sbjct: 481 TRVGGNSQAEPVNVSPDGQRVLYRLFDVVAGGPRTPVSLWVTGPEGGMAQQVAEVDLSGS 540

Query: 262 APRFSSNGKRALISVQK 278
           A  +S +G+  L++ ++
Sbjct: 541 AAVWSPDGRTLLLAGER 557


>gi|297560237|ref|YP_003679211.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296844685|gb|ADH66705.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 631

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKD-----GSQERLLVED--SNLQAPTWSPSGRSLIF 406
            SP G  IA+     ++  + V   D       + R +  D   ++Q+  W+   R L++
Sbjct: 23  ISPDGTRIAYLAPWRDRLNVWVQGLDPSGDLDGEPRCVTADQARSVQSYQWTDDPRWLLY 82

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLIN 432
            +   GD    L+ +DL+    T ++
Sbjct: 83  LQDSGGDENWHLFRVDLDAAEPTAVD 108



 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 42/239 (17%), Positives = 89/239 (37%), Gaps = 26/239 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDT----RIDRAPKRIG-NFRSMILAPRFSSNGKRA 272
             SP+  ++AY      D L V++        +D  P+ +  +    + + +++ + +  
Sbjct: 22  TISPDGTRIAYLA-PWRDRLNVWVQGLDPSGDLDGEPRCVTADQARSVQSYQWTDDPRWL 80

Query: 273 LI--SVQKDEAMDIYSVDLQSNATER--LTNTLFINI---SASYSPDSSQIVFESDRE-G 324
           L       DE   ++ VDL +       LT      +     S        V  + R+  
Sbjct: 81  LYLQDSGGDENWHLFRVDLDAAEPTAVDLTPFPGARVVSFEPSRGRPGKLAVSLNARDAA 140

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMK--KDG 380
              L+ +     +   ++   E+     VW+   +G+LIA    +   F I       D 
Sbjct: 141 AFDLHELDVATGE---LTVLAESPGAAKVWAQGREGELIATALNADNDFEISRHDSETDT 197

Query: 381 SQERLLVEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           +   L+ E ++     +    +P G  +     + G   ++L  +DL+   ET +++ A
Sbjct: 198 TSTVLVYEGADYPLGVFPAQVTPDGTGMWIGSSR-GTDRTRLVRVDLSTGEETEVDSHA 255



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 55/146 (37%), Gaps = 13/146 (8%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSN-----GSDQKRISQDKEASYFDPVWSPQGD 359
             A+ SPD ++I + +    +  ++V   +       + + ++ D+  S     W+    
Sbjct: 19  AGATISPDGTRIAYLAPWRDRLNVWVQGLDPSGDLDGEPRCVTADQARSVQSYQWTDDPR 78

Query: 360 LIAFTKFSGE--KFAIGVMKKDGSQERL--LVEDSNLQAPTWSPS-GR--SLIFSRKKDG 412
            + + + SG    + +  +  D ++     L      +  ++ PS GR   L  S     
Sbjct: 79  WLLYLQDSGGDENWHLFRVDLDAAEPTAVDLTPFPGARVVSFEPSRGRPGKLAVSLNARD 138

Query: 413 DTGSKLYSIDL-NGRNETLINTPAYA 437
                L+ +D+  G    L  +P  A
Sbjct: 139 AAAFDLHELDVATGELTVLAESPGAA 164



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/143 (10%), Positives = 44/143 (30%), Gaps = 13/143 (9%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYS--VDLQS---NATERLTNTLFINISA-SYSPDSSQ 315
               S +G R        + ++++   +D           +T     ++ +  ++ D   
Sbjct: 20  GATISPDGTRIAYLAPWRDRLNVWVQGLDPSGDLDGEPRCVTADQARSVQSYQWTDDPRW 79

Query: 316 IVFESDREG--KEQLYVMQSNGSDQKR--ISQDKEASYFDPVWS---PQGDLIAFTKFSG 368
           +++  D  G     L+ +  + ++     ++    A       S   P    ++      
Sbjct: 80  LLYLQDSGGDENWHLFRVDLDAAEPTAVDLTPFPGARVVSFEPSRGRPGKLAVSLNARDA 139

Query: 369 EKFAIGVMKKDGSQERLLVEDSN 391
             F +  +     +  +L E   
Sbjct: 140 AAFDLHELDVATGELTVLAESPG 162


>gi|158300125|ref|XP_320124.6| AGAP010318-PA [Anopheles gambiae str. PEST]
 gi|157013514|gb|EAA15177.5| AGAP010318-PA [Anopheles gambiae str. PEST]
          Length = 305

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 75/227 (33%), Gaps = 17/227 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +       +    +SP+++ +  ++ D +    + + D         +    + I+ 
Sbjct: 9   PRRVLKGHQAKVLCSNWSPDKRHIVSSSQDGK----LIIWDAFTTNKEHAVTMPTTWIMG 64

Query: 263 PRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQIVF 318
             ++ +G         D  + +Y +    D+ S      T+T +  +S    P+S Q + 
Sbjct: 65  CSYAPSGNLVA-CGGLDNKVTVYPITLEEDISSRKKTVGTHTSY--MSCCIFPNSDQQIL 121

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMK 377
                G     +         +              +P      F   S +K A I  M+
Sbjct: 122 TG--SGDSTCALWDVESGQLLQSFHGHTGDVMSIDLAPNETGNTFVSGSCDKMAFIWDMR 179

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                +      S++ +  + PSG ++        D+  +L+ +  +
Sbjct: 180 SGHVVQSFEGHQSDINSVKFHPSGDAI---STGSDDSTCRLFDMRAD 223


>gi|124008301|ref|ZP_01692997.1| lipoprotein, putative [Microscilla marina ATCC 23134]
 gi|123986250|gb|EAY26079.1| lipoprotein, putative [Microscilla marina ATCC 23134]
          Length = 683

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 80/220 (36%), Gaps = 27/220 (12%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR----- 264
            D  +    FS +  K+  A     D   V + D +  +   +   +       R     
Sbjct: 72  HDAWVRALTFSLDGSKML-AGLAHGD---VVVWDAKARKLIHQFTAYSKYETVRRIERVM 127

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ-IVFESDRE 323
           FSS+G +  I+V   + + ++  +       +L +      + ++SPD     VF +D  
Sbjct: 128 FSSDGTK-FITVSYSDHVKLWDAN-----NYQLLHDFKRVPAVNFSPDGRFIFVFNAD-- 179

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            K+++ V  +              + +    SP G  +      G K  + +      + 
Sbjct: 180 -KQKVVVWDAKTVRPIDEVMVTSKANYALAASPDGSQLLI---GGGKKVVELWDVKTKKL 235

Query: 384 RLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             + +       + T+SP GR ++     DG+   KL+++
Sbjct: 236 IKVFKGHADWLKSMTFSPDGRQML---TGDGNGFVKLWNV 272



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 64/166 (38%), Gaps = 21/166 (12%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
            +    +    FS++G++ +I+   D    ++ +  +SN             + ++S D 
Sbjct: 29  TSHTDDVTTAAFSADGRQ-VITGSHDNTAKLWQI--KSNKLLYTFVHDAWVRALTFSLDG 85

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-------WSPQGDLIAFTKF 366
           S+++      G     V+  +   +K I Q    S ++ V       +S  G       +
Sbjct: 86  SKML-----AGLAHGDVVVWDAKARKLIHQFTAYSKYETVRRIERVMFSSDGTKFITVSY 140

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL-IFSRKKD 411
           S       V   D +  +LL +   + A  +SP GR + +F+  K 
Sbjct: 141 SD-----HVKLWDANNYQLLHDFKRVPAVNFSPDGRFIFVFNADKQ 181



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 64/321 (19%), Positives = 117/321 (36%), Gaps = 58/321 (18%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G  +  G  +  VE  LWDVK +K I  K F       + +  T S D  Q +TG+   F
Sbjct: 213 GSQLLIGGGKKVVE--LWDVKTKKLI--KVFKGHADWLKSM--TFSPDGRQMLTGDGNGF 266

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                              L  +  +GA I         I     +SP  + +     + 
Sbjct: 267 V-----------------KLWNVK-NGALIHTFKMPPKNITKL-AYSPQSKHILAVCEER 307

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                V + D R  +  ++I   +S + A  FS N  + L+ +  +  + ++  + Q+  
Sbjct: 308 ----HVSIWDLRTKKQAQKIIPNKSPVTAVAFSPNSHKTLLGI--NGLVKLW--NTQTGK 359

Query: 294 TERLTNTLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
            E + N             +  PD+S ++    R  + QL+ ++++      IS+    S
Sbjct: 360 FEGVLNGYKPGDRTVLKCITVLPDNSGLL-TGHRGRRVQLWSLKTSQLMHTFISKGGAQS 418

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--------NLQAPTWSPS 400
                 SP G  +    +S   F +     D   ++ + +DS        N     +SP 
Sbjct: 419 I---KVSPDGSKMLVGTWS-SAFELW----DLKTKQSIFKDSWETKYTAWNGTEAIFSPD 470

Query: 401 GRSLIFSRKKDGDTGSKLYSI 421
           G  ++    +D      L+S+
Sbjct: 471 GSKILAHAFRD---RLGLWSV 488


>gi|190896158|gb|ACE96592.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896166|gb|ACE96596.1| U5 snRNP-specific protein-like factor [Populus tremula]
          Length = 215

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 71/227 (31%), Gaps = 23/227 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +       + +  ++ +  ++  A+ D      V   D    +  K++    S + + 
Sbjct: 4   FMVMRGHKNAVLDLHWTADGSQIISASPDK----TVRAWDVETGKQIKKMAEHSSFVNSC 59

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S  G   ++S   D    ++  DL+     +     +   + S+S D+S  +F    +
Sbjct: 60  CPSRRGPPLVVSGSDDGTSKLW--DLRQKGAIQTFPDKYQITAVSFS-DASDKIFTGGID 116

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + V      +     +  +        SP G  +  T     K  I  M+    Q 
Sbjct: 117 --NDVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLL-TNGMDNKLCIWDMRPYAPQN 173

Query: 384 R--LLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           R   + E             +WSP G  +       G     +Y  D
Sbjct: 174 RCVKIFEGHQHNFEKHLLKCSWSPDGSKV-----TAGSADRMVYIWD 215


>gi|166711639|ref|ZP_02242846.1| peptidase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 778

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/347 (14%), Positives = 98/347 (28%), Gaps = 68/347 (19%)

Query: 144 FFSSPASWR---KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           F    A+WR      H   D   Q+ +  +G    R   V          ++   +  DG
Sbjct: 134 FALDDAAWRCTLTTYHCAPDARPQAQSRPRGFGVVRDPLVPADTTPSRSPDARWEVLADG 193

Query: 201 ANI-----------RYLTPSRDQILFE---PRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
            N+           R  +  R    F+     +SP+ Q++A          RV  ++   
Sbjct: 194 WNLMLRRVADGQVTRLSSDGRADDYFDLESVAWSPDSQQLAVYRVRPGLARRVTRVEAAP 253

Query: 247 DRAPKRIGNFR---------------------------------SMILAP-RFSSNGKRA 272
               + + + +                                    L+P ++ S+G+  
Sbjct: 254 AGGGQPVVHTQLYPKPGDAVDVERPVLFALDGTRRDVETDVFDNPYSLSPLQWRSDGRSV 313

Query: 273 LISVQKDEAMDIYSV--DLQSNATERLTNTLF---INISASYSPD----SSQIVFESDRE 323
                +     +  +  D +S              +    S+  D      ++++ S+R+
Sbjct: 314 AFEYVQRGFQRMRVIAVDARSGRAHVAVGEDARTFVYADRSFRHDVDGRGDEVLWISERD 373

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKF------SGEKFAIGVM 376
           G   LY+        KR          D +        I FT              +  +
Sbjct: 374 GWRHLYLFDGRNGQLKRQLTRGPWVVRDVLRVDDMQRRIWFTASGMDAGKDPYYRQLYSV 433

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLI-FSRKKDGDTGSKLYSID 422
             DG +   L           +  G+  +    + D     +L++ID
Sbjct: 434 DFDGRRLMRLTHTDADHDVAIADDGQHYVDVYSRPDLPPVMELHAID 480



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 33/283 (11%), Positives = 76/283 (26%), Gaps = 65/283 (22%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL----APRFSS 267
                P  SP+ +    A     D   + L      +  +   + R+       +  +S 
Sbjct: 174 PADTTPSRSPDARWEVLA-----DGWNLMLRRVADGQVTRLSSDGRADDYFDLESVAWSP 228

Query: 268 NGKRALISVQKDEAMDIYS----VDLQSNATERLTN-----TLFINIS------------ 306
           + ++  +   +       +               T         +++             
Sbjct: 229 DSQQLAVYRVRPGLARRVTRVEAAPAGGGQPVVHTQLYPKPGDAVDVERPVLFALDGTRR 288

Query: 307 ---------------ASYSPDSSQIVFESDREGKEQLYVMQSN----------GSDQKRI 341
                            +  D   + FE  + G +++ V+  +          G D +  
Sbjct: 289 DVETDVFDNPYSLSPLQWRSDGRSVAFEYVQRGFQRMRVIAVDARSGRAHVAVGEDAR-- 346

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPS 400
           +       F      +GD + +         + +   ++G  +R L     +        
Sbjct: 347 TFVYADRSFRHDVDGRGDEVLWISERDGWRHLYLFDGRNGQLKRQLTRGPWVVRDVLRVD 406

Query: 401 G--RSLIFSRKK----DGDTGSKLYSIDLNGRNE-TLINTPAY 436
              R + F+             +LYS+D +GR    L +T A 
Sbjct: 407 DMQRRIWFTASGMDAGKDPYYRQLYSVDFDGRRLMRLTHTDAD 449


>gi|163841917|ref|YP_001626322.1| acylamino-acid-releasing enzyme [Renibacterium salmoninarum ATCC
           33209]
 gi|162955393|gb|ABY24908.1| acylamino-acid-releasing enzyme [Renibacterium salmoninarum ATCC
           33209]
          Length = 184

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 31/77 (40%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +L+D           ++        +  +G+  +++  ++    I+ +D++S A  +L+ 
Sbjct: 4   WLIDLASKEMTPLASDWDRWGSPQAWLPDGRTVVVTADQNGRSPIFLIDVESGAVRQLSQ 63

Query: 300 TLFINISASYSPDSSQI 316
                 +    PD S +
Sbjct: 64  DDAAYTNVLVGPDGSAL 80


>gi|156395597|ref|XP_001637197.1| predicted protein [Nematostella vectensis]
 gi|156224307|gb|EDO45134.1| predicted protein [Nematostella vectensis]
          Length = 491

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/237 (10%), Positives = 70/237 (29%), Gaps = 9/237 (3%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           GD  + + +   + +  +      V   D +  + L             + N   +   +
Sbjct: 233 GDSVTSVSWSERNGLVSVGTYKGLVQIWDASAQKKLLTMDGHSARVGALAWNGDML---S 289

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               D L +        +  +R+   R  +   ++S + +             +   +L 
Sbjct: 290 SGSRDRLILQRDTRSPTQLERRLVGHRQEVCGLKWSPDHQHLA---SGGNDNKLLVWNLS 346

Query: 291 SNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +   ++ +       + S+SP    ++         ++    +      +   D  +  
Sbjct: 347 GSTPIQQYSEHTAAVKAISWSPHQHGLLASGGGTADRRIRFWNTLTGQPLQCV-DTGSQV 405

Query: 350 FDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +  WS   + +  T  +S  +  +          +L      +     SP G +++
Sbjct: 406 CNLAWSKHSNELVSTHGYSQNQILVWKYPSLTQVAKLTGHSFRVLYLAVSPDGEAIV 462


>gi|50305279|ref|XP_452599.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641732|emb|CAH01450.1| KLLA0C08976p [Kluyveromyces lactis]
          Length = 911

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 64/192 (33%), Gaps = 12/192 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+  K+  A+++ +    + + D                + A  F+  G + L S   
Sbjct: 349 YSPDGSKIVTASHEGK----IKIWDVASGFCLATFDEHAGGVSAVEFAKKG-QVLFSASL 403

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  +  + + ++       T T  I  + S + D S  V  +  E    ++V        
Sbjct: 404 DGTVKAWDL-IRYRNFRTFTATERIQFN-SLAVDPSGEVVCAGSEDSFDIFVWSVQTGQL 461

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                  E       +S +  ++A   +      I V    G  +++   +      + S
Sbjct: 462 VDTLSGHEGPISCLSFSNENGVLASASWDKT---IRVWSLFGRSQQVEPFEVFSDVLSIS 518

Query: 399 --PSGRSLIFSR 408
             P G+ +  S 
Sbjct: 519 MKPDGQQIAAST 530



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 47/127 (37%), Gaps = 12/127 (9%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-------RLTNTLFIN-IS 306
           NF+  +   +FS +GK  L ++     + I+     +   +       R+    F +  S
Sbjct: 94  NFKEKVYDLKFSPDGK--LFALACGRFLQIWRTPETTEDRQFAPFVRYRIHAGHFSDITS 151

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTK 365
            ++S DS  I+  S ++   +++ + S   +    +      +     +S   + I    
Sbjct: 152 LTWSKDSRFIISTS-KDLTARIWSVNSEEKNLASTTFAGHRDNVIGAYFSDDQEKIYTVS 210

Query: 366 FSGEKFA 372
             G  F 
Sbjct: 211 KDGALFQ 217


>gi|20089734|ref|NP_615809.1| cell surface protein [Methanosarcina acetivorans C2A]
 gi|19914667|gb|AAM04289.1| cell surface protein [Methanosarcina acetivorans C2A]
          Length = 2275

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 75/210 (35%), Gaps = 15/210 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G   + L  ++ DG      T   D     P   P+     YA   D ++  +    T  
Sbjct: 537 GSNDDKLYALNPDGTEKWNYTAGNDFRYGSPAIGPDGT--VYAGNMDNNVYALNPDGTLK 594

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                       ++  P   S+G   + +   D   ++Y+++         T    I   
Sbjct: 595 WSY----TTGGYVLSGPAIGSDGT--IFAGCYD--YNVYALNPDGTLKWSYTTGGHIFNI 646

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +   D +  ++   ++  + LY +  +G+++ +       +Y  PV    G +    + 
Sbjct: 647 PAIGSDGT--IYIGCQD--KNLYALNPDGTEKWKYLLSNSVTYSSPVIGSDGTIYLGVRN 702

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           S   +    +  DG+++   +  S +Q+P+
Sbjct: 703 SVGNY-FHAINPDGTEKWKYLTGSTIQSPS 731



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/237 (13%), Positives = 75/237 (31%), Gaps = 26/237 (10%)

Query: 202 NIRYLTP-SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           N+ +            P    +      + +D +      L     D   K   +  +  
Sbjct: 430 NVIWTLDVGGSYRAVSPSIGADGIIYVGSQFDHK------LYALYPDGTEKWSYSGSTYF 483

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
            +P   SNG   +     D   ++Y+++              I  + +   D +  +  +
Sbjct: 484 SSPTIGSNGT--IYVGSMD--SNLYALNPDGTLKWSFATGGEIYAAPAIGSDGTIYIGSN 539

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           D    ++LY +  +G+++   +   +  Y  P   P G              +  +  DG
Sbjct: 540 D----DKLYALNPDGTEKWNYTAGNDFRYGSPAIGPDGT----VYAGNMDNNVYALNPDG 591

Query: 381 SQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           + +        + + P     G   IF+    G     +Y+++ +G  +    T  +
Sbjct: 592 TLKWSYTTGGYVLSGPAIGSDGT--IFA----GCYDYNVYALNPDGTLKWSYTTGGH 642


>gi|113476738|ref|YP_722799.1| WD-40 repeat-containing protein [Trichodesmium erythraeum IMS101]
 gi|110167786|gb|ABG52326.1| WD-40 repeat [Trichodesmium erythraeum IMS101]
          Length = 728

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 68/206 (33%), Gaps = 16/206 (7%)

Query: 174 NSRILFVSESVVSGII------KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           ++R +F       G          +L V + +     +L       +     +P+ ++V 
Sbjct: 524 DNRCIFAVAVTPDGKQAIACLSDQTLKVWNLETLEEIFLLRGHTDWVSAVTVTPDGKQVI 583

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             ++D      + +      +    +      + A   + +GKR +IS   D+ + ++ +
Sbjct: 584 SGSFDK----TIKVWSLATRKEIATLVGHTGWVKALAVTPDGKR-VISGSFDKTIKVWCL 638

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +        L+       S + +PD S ++  SD      L V           +   E+
Sbjct: 639 E-TGQELFSLSGHTDWVNSIAVTPDGSLVISASD---DNTLKVWDLETRQVIA-NFTGES 693

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAI 373
           S      +  G      + SG    +
Sbjct: 694 SLECCAVAADGVQFIVGEASGRVHFL 719



 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 79/238 (33%), Gaps = 17/238 (7%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           I+   + V+S    +++ V + +     Y        +      PNQ+ +        D 
Sbjct: 450 IVLPEQQVISAAWDHTIKVWNLNTTKSIYTLKGHTDRVNSVAALPNQRII-----SASDD 504

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
             + +   +       I +    I A   + +GK+A+  +  D+ + ++  +L++     
Sbjct: 505 NTLKIWSLKTAEELLTIVSDNRCIFAVAVTPDGKQAIACLS-DQTLKVW--NLETLEEIF 561

Query: 297 LTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           L       +SA + +PD  Q++  S     + + V       +                +
Sbjct: 562 LLRGHTDWVSAVTVTPDGKQVISGSF---DKTIKVWSLATRKEIATLVGHTGWVKALAVT 618

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS--PSGRSLIFSRKKD 411
           P G  +    F      I V   +  QE   +        + +  P G  +I +   +
Sbjct: 619 PDGKRVISGSFDKT---IKVWCLETGQELFSLSGHTDWVNSIAVTPDGSLVISASDDN 673



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 41/370 (11%), Positives = 99/370 (26%), Gaps = 95/370 (25%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR----VIKEGKDRLRVEFRLWDVKD 135
             I+            +      W       +V       +     + L+V    W+ + 
Sbjct: 134 RPIAPSLTPPGGRLLRTFTGHSGW----VNAIVVTSGGMVISGSSDNTLKV----WNPET 185

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
            K+I         A  R IA          +  +K             V+SG    ++ V
Sbjct: 186 GKEI--STITGHAARIRAIA----------LLDDKW------------VISGSDDFTIKV 221

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            D +            + +       + + ++ ++ +      + + +    +    +  
Sbjct: 222 WDLETTEELVTLTGHTRAVRAVAALSDGRVISGSSDNT-----IKVWNLETQKVEMTLRG 276

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-------------------ER 296
            +  + A    S+  + +IS   D  + I+S  L++                       +
Sbjct: 277 HQGWVNAVSVLSD--KEIISGSSDNTIKIWS--LETGEELFTLKGHTDGVRTITTLLERQ 332

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           + +    N    ++ DS + VF                        +           +P
Sbjct: 333 IISGAADNTVKVWNLDSKKAVFT----------------------FKGHSKEINAVAVTP 370

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS--PSGRSLIFSRKKDGDT 414
               +           + V   +  +E   ++         +  P GR +        D 
Sbjct: 371 DNKRMISAASDNT---LKVWNLETGEELFPLKGHTESVYAVAVLPDGRLI----SGSDDF 423

Query: 415 GSKLYSIDLN 424
             K++S+D +
Sbjct: 424 TLKIWSLDTS 433


>gi|238881371|gb|EEQ45009.1| hypothetical protein CAWG_03315 [Candida albicans WO-1]
          Length = 519

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 53/319 (16%), Positives = 101/319 (31%), Gaps = 73/319 (22%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + SG   ++  + D +     +        +    +SP+ + +A  + D+     + 
Sbjct: 158 SSRMCSGAGDSTARIWDCNTQTPLHTLSGHSNWVLCVTYSPDGKLIATGSMDN----TIR 213

Query: 241 LMDTRIDRA-PKRIGNFRSMILAPRFSS-------NGKRALISVQKDEAMDIYSVDLQSN 292
           L D    +   K +      + +  +         +  R + S  KD  + ++    ++ 
Sbjct: 214 LWDATTGKPVGKPLLGHSKWVSSLSWEPLHLVKASDNPRLV-SGSKDGTVKVWDTTARTC 272

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           A   L++         +S   S IV+ +  +   + + + +NG   K I   K  +++  
Sbjct: 273 AMT-LSSHTGAVSCVKWS--GSNIVYSASHDKTIKAWDISANG---KCIQTLKSHAHWVN 326

Query: 353 VWSPQGDLIA----FTKFSGEKFAIG--------------VMKKDGS-QERLLVEDSNLQ 393
             S   D +     F   S     I               V K +GS  ERL+    +  
Sbjct: 327 HLSLSTDYVLRKGGFDHTSTRSTQISPEELRARALQQYEKVAKLNGSISERLVTASDDFT 386

Query: 394 APTW------------------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              W                        SP GR ++ S     D   KL+    +G   T
Sbjct: 387 MYFWEPLKSSKPICRMTGHQKLVNHVNFSPDGRFVVSSS---FDNSIKLW----DGIRGT 439

Query: 430 LINTPAYASDP----QWVG 444
            I+T      P     W  
Sbjct: 440 FISTLRGHVAPVYQTAWSA 458



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 41/123 (33%), Gaps = 5/123 (4%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +    +  +   R+   + ++    FS +G R ++S   D ++ ++   ++      L  
Sbjct: 389 FWEPLKSSKPICRMTGHQKLVNHVNFSPDG-RFVVSSSFDNSIKLWD-GIRGTFISTLRG 446

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            +      ++S D+  +V  S       L V                   +   WS  G 
Sbjct: 447 HVAPVYQTAWSADNRLLVSCSK---DTTLKVWDIRTKKLSVDLPGHSDEVYAVDWSLDGK 503

Query: 360 LIA 362
            +A
Sbjct: 504 RVA 506


>gi|213405955|ref|XP_002173749.1| transcription factor TFIID complex subunit Taf5
           [Schizosaccharomyces japonicus yFS275]
 gi|212001796|gb|EEB07456.1| transcription factor TFIID complex subunit Taf5
           [Schizosaccharomyces japonicus yFS275]
          Length = 641

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/288 (13%), Positives = 81/288 (28%), Gaps = 29/288 (10%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y  +   KG   S I+   E+V     +  L       +   Y        +    FSP+
Sbjct: 280 YIPLPPPKG---SDIVAEVEAVKDWTKRLRLGPQASLPSVCMYTFHHAKGSMNCAEFSPD 336

Query: 223 QQKVA---------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
              +A           +   +                 R+ +    +    FS + +  L
Sbjct: 337 TTMIAAGFTESYIRLWSIRSDKKSSGKANSLDEGITSTRLLSHSGPVYGTTFSPDNRHLL 396

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS----PDSSQIVFESDREGKEQLY 329
            S  +D +  ++SVD ++     L      +    +     P        +  +   QL+
Sbjct: 397 -SCSEDRSARLWSVDTKTA----LVAYKG-HTGPIWDVAFGPFGHYFA-TASHDQTAQLW 449

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
                     RI     +      + P    +  T  S +   +  + +  S        
Sbjct: 450 SCDHIY--PLRIFAGHLSDVDCVTFHPNSAYVL-TGSSDKTCRLWDVHRGHSVRVFNGHT 506

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             + A   +P G ++  +     D    L+ +    R +T+       
Sbjct: 507 HPVNAVAIAPDGHTMASAAD---DGIIHLWDLGSGRRIKTMRGHKGSV 551


>gi|270160649|gb|ACZ63294.1| WD40 superfamily-like protein [Fusarium sp. NRRL 36351]
          Length = 588

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 73/232 (31%), Gaps = 33/232 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ +        D       L          ++  F + I A  FS + +  L++  
Sbjct: 2   AFSPDSKLYCLQLAADSRFGTQQLDTFEYHLEDNKLQRF-AAITAVAFSPDNQ--LLASG 58

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN-------ISASYSPDSSQIVFESDREGKEQLYV 330
               + ++S          LTN  F +          ++SPD   +          ++ V
Sbjct: 59  SSGKVRLWS----------LTNRGFCDLDVGSLVYGLAFSPDCQLLA-TGLMGRSAKIRV 107

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK------FSGEKFAIGVMKKDGSQER 384
             +  +D+  + Q+          SP    +                 + +        +
Sbjct: 108 WDTVYADRGYL-QEDSGRCRGIHISPNRKFVVSQSSKSSRKLDASSRTLQLWDASTGTLQ 166

Query: 385 -LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
             L  +  +    +SP  +S+ F   +  +T S +++    G  E + +  A
Sbjct: 167 KTLTNEDVIFDVQFSPDSKSVEF---RTSETESYIWNT-TTGNKEQIYDLQA 214



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 14/146 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDIL-RVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           T   + I      SPN   +A A YD E  L R+ L   R       +   +   +   F
Sbjct: 337 THKHNGIPITFACSPNLIYLAEALYDLESGLERIELYCPREWYQKITLRGHKGGAVHMAF 396

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFES-D 321
           S + +   ++   D  + ++     +  +  +      N       +SPD+  I   S D
Sbjct: 397 SPDNRLLAVAST-DRTVRLW----DATTSTHINTFQTYNDIPEMVRFSPDAQIIAVASLD 451

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEA 347
           R     + +  +   + +++ Q  + 
Sbjct: 452 RA----IRIWSTVTGEYQQMVQYDQG 473


>gi|302555252|ref|ZP_07307594.1| acyl-peptide hydrolase [Streptomyces viridochromogenes DSM 40736]
 gi|302472870|gb|EFL35963.1| acyl-peptide hydrolase [Streptomyces viridochromogenes DSM 40736]
          Length = 669

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 42/288 (14%), Positives = 94/288 (32%), Gaps = 58/288 (20%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG------ANIRYLTPSRDQILFEP 217
             +  E+G+    +   +    + + +  L  +  DG      A +R LT  R + +  P
Sbjct: 129 PQVRPERGEVWCVLEEFTGEAPTDVRR-VLAAVPLDGSAARDRAAVRELTDGRHRFVTGP 187

Query: 218 RFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAP---KRIGNFRSMILA-PRFSSNG 269
           R SP+ ++ A+  +D      D   + L D   D  P   + +       +A   ++ +G
Sbjct: 188 RLSPDGRRAAWLAWDHPRMPWDGTELVLADIGPDGTPHGARTVAGGPGESIAQVDWTHDG 247

Query: 270 KRALISVQKDEAMDIYSVDLQ--------SNATERLTNTLFINISASYSPDSSQIVFESD 321
            R L +  +    ++Y  D            A  +L +         ++P +S ++    
Sbjct: 248 -RLLHASDRSGWWNLYLDDEPLCPREEEFGGALWKLGSRW-------FTPLASGMIAVVH 299

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL--------------IAFTKFS 367
             G   L ++     +   +      + F P  +  G+               +A     
Sbjct: 300 GRGATALGILDPETGEV--VDAAGPWTEFAPTLAAHGERSETGVPPPGGWGRVVAVGASP 357

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQA-PTW----------SPSGRSL 404
              + +  +     + R++    +    P +           P GR +
Sbjct: 358 RSAYEVVELDARTGRARVIGAGHDDAVDPAYYPEPQIRTFTGPDGRDI 405


>gi|330796181|ref|XP_003286147.1| hypothetical protein DICPUDRAFT_46602 [Dictyostelium purpureum]
 gi|325083892|gb|EGC37333.1| hypothetical protein DICPUDRAFT_46602 [Dictyostelium purpureum]
          Length = 1022

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 41/119 (34%), Gaps = 6/119 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRS 258
           +  L       ++   FS + +K+A  + D+     D+  +YL +    +    +     
Sbjct: 685 LFTLKDKHRDEVWFITFSNDGKKLASCSRDNNIIIWDMSPIYLDEPSEPKVLHTLSGHTK 744

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            +    +S N K  L S   D    +++        +            S+ PD+ + V
Sbjct: 745 EVSHLAWSPNDKYLL-STSNDSTTKLWN-PADGTLLKTFAKHTDYVTCCSWHPDNKRFV 801


>gi|145522915|ref|XP_001447300.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414803|emb|CAK79903.1| unnamed protein product [Paramecium tetraurelia]
          Length = 305

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 4/103 (3%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD + +       G   + +       QK          +   +SP G  +A +    
Sbjct: 32  FSPDGTTLASC---GGDHFICLWDVKTGQQKAKLDGHTKEVYQVCFSPDGKKLA-SSSRD 87

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           E  ++   +   S   L+     + +  +SP   +L  S  K+
Sbjct: 88  ESISLWNFETGESIGILIGHWKRIPSVCFSPDSTTLASSSYKE 130



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 48/129 (37%), Gaps = 9/129 (6%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGI-----IKNSLCVMDRDGANIRYLTPSR 210
           H +   +Y     ++G  +S IL V  S            + +C+ D      +      
Sbjct: 6   HLVKSQLYPFTGSKQGGHSSGILSVCFSPDGTTLASCGGDHFICLWDVKTGQQKAKLDGH 65

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            + +++  FSP+ +K+A ++ D+     + L +     +   +      I +  FS +  
Sbjct: 66  TKEVYQVCFSPDGKKLASSSRDE----SISLWNFETGESIGILIGHWKRIPSVCFSPDST 121

Query: 271 RALISVQKD 279
               S  K+
Sbjct: 122 TLASSSYKE 130


>gi|121600642|ref|YP_992370.1| hypothetical protein BMASAVP1_A1030 [Burkholderia mallei SAVP1]
 gi|126448942|ref|YP_001079888.1| hypothetical protein BMA10247_0313 [Burkholderia mallei NCTC 10247]
 gi|254175495|ref|ZP_04882155.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
 gi|121229452|gb|ABM51970.1| conserved hypothetical protein [Burkholderia mallei SAVP1]
 gi|126241812|gb|ABO04905.1| conserved hypothetical protein [Burkholderia mallei NCTC 10247]
 gi|160696539|gb|EDP86509.1| conserved hypothetical protein [Burkholderia mallei ATCC 10399]
          Length = 391

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D + V +R +D    +        +   S+ 
Sbjct: 13  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYV-YR-FDTDSGQVSPVSSAKAENPSYL 70

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 71  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 128

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 129 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 188

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 189 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 222

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    I  +       
Sbjct: 223 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLAHIETVPMTAPGF 282

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 283 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 327


>gi|58391653|ref|XP_318756.2| AGAP009700-PA [Anopheles gambiae str. PEST]
 gi|55235879|gb|EAA14561.2| AGAP009700-PA [Anopheles gambiae str. PEST]
          Length = 314

 Score = 47.3 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 72/184 (39%), Gaps = 16/184 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +SG +  +L + D    N + +     Q+   P  + + + + +A   + + +++
Sbjct: 119 VEDTFLSGSLDKTLRLWDLRSPNCQGVM----QLNGRPVAAYDPEGLIFAAGVNSESIKL 174

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
           Y +   D       K            +FS +GK  LIS        I  +D       +
Sbjct: 175 YDLRSFDKGPFVTFKLNQEKECDWTGLKFSRDGKTILISTN---GSIIRLIDAFHGTPLQ 231

Query: 296 RLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             T   N   I I AS+SPD SQ +F    +G+  ++   + G     ++ D        
Sbjct: 232 TFTGHLNNKGIPIEASFSPD-SQFIFSGSTDGRVHVWNADT-GYKICVLNGDHPGPVQCV 289

Query: 353 VWSP 356
            ++P
Sbjct: 290 QFNP 293


>gi|332526219|ref|ZP_08402352.1| hypothetical protein RBXJA2T_10184 [Rubrivivax benzoatilyticus JA2]
 gi|332110057|gb|EGJ10685.1| hypothetical protein RBXJA2T_10184 [Rubrivivax benzoatilyticus JA2]
          Length = 332

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 45/228 (19%), Positives = 65/228 (28%), Gaps = 27/228 (11%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALISVQKD 279
           P+  + A   YDDE      L   R                   R S   K  L+  Q +
Sbjct: 74  PDGSQYAIYNYDDERDGDTVLRIKRTSDGTTLYSAVISGYAADLRPSPADKAVLLVSQAE 133

Query: 280 EAMDIYS------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +     S      VDL       L     +     + PD   +   +D      L V Q 
Sbjct: 134 DYTSSLSATDYVFVDLA--NLRELDRISGVGTVVDWLPDGRYLHLAAD----GTLSVGQV 187

Query: 334 NGSDQKRISQD-KEASYFDPVWSPQG--DLIAFTKFSG----EKFAIGVMKKDGSQERLL 386
            GS       +    S  D    P G   L+    ++G    +   + V   DGS    L
Sbjct: 188 GGSRSTVAKLNLGGRSLVDLAVDPLGLRYLVTLVSYTGAGNVDDLDLWVGGVDGSALERL 247

Query: 387 VEDSNLQAPTWSPSGRSLIF-------SRKKDGDTGSKLYSIDLNGRN 427
                     WSP G  + F                 +++    +GRN
Sbjct: 248 TATGLTSYGRWSPDGERVAFDVDTGTVCSGSACMGTCEIWYAPASGRN 295


>gi|256394590|ref|YP_003116154.1| alpha-1,2-mannosidase [Catenulispora acidiphila DSM 44928]
 gi|256360816|gb|ACU74313.1| alpha-1,2-mannosidase [Catenulispora acidiphila DSM 44928]
          Length = 1189

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 66/217 (30%), Gaps = 24/217 (11%)

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            P+ + V  + + D  +  + +         K       + + P     G +  ++ Q D 
Sbjct: 975  PDGKTVWVSDFSDGTVQPIDVATLTAGTPVKVGSQAERVAVNPA----GTQLWVADQGDG 1030

Query: 281  AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             +    VDL S                +++ D S+    +   G   + V+ + G+    
Sbjct: 1031 TVS--VVDLASRTVVHTVAVGAAPFGIAFAHDGSKAYVTN--GGGNSVSVIDT-GAAAVS 1085

Query: 341  ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
             +    A       SP G  + +   SG      +    G    L+   S   A  ++P 
Sbjct: 1086 ATIPVGAGPQGIRVSPDGS-VVYVADSGAGGVTPIATATGVAGPLIPTGSGAYAVGFTPD 1144

Query: 401  GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            G              S  + +D N  +   +     A
Sbjct: 1145 G--------------SVAWVVDTNTNDVRPVTVATGA 1167


>gi|226355274|ref|YP_002785014.1| hypothetical protein Deide_04310 [Deinococcus deserti VCD115]
 gi|226317264|gb|ACO45260.1| Conserved hypothetical protein, precursor [Deinococcus deserti
           VCD115]
          Length = 321

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 89/229 (38%), Gaps = 27/229 (11%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD-----DEDILRVYLMDTRIDRAPKR 252
            DG      T   D       ++  + ++AY   D     D  + RVY+ D  +  AP++
Sbjct: 100 SDGRRFTLPTRGADV-----TWTRAETRLAYTRSDTTGNFDRRLSRVYVAD--VFGAPRQ 152

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMD--IYSVDLQSNATERLTNTLFINISASYS 310
           +       ++  + ++    L    +    D  ++++D+++ A   L   L      S S
Sbjct: 153 VATLYGGGVS-GWINDTTLLLSGKAQPGVRDRELFTLDIRNGARRTLGQALSF-RGVSLS 210

Query: 311 PDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFS 367
           PD + +V+    D + +  L++  + G   +++      ++    W   G L+    +  
Sbjct: 211 PDGAWVVYYVAFDSKARNGLWIRPTAGGAARKL-----DAFGAYRWRDAGRLLLIPLQPD 265

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNL---QAPTWSPSGRSLIFSRKKDGD 413
           G    +   +   +  R L +  +       + SP G+ + +   ++G+
Sbjct: 266 GSPHVLREYRMRENAWRTLGDLGDQVRQGDWSVSPDGQRMAYLSARNGN 314



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 9/164 (5%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           G  G  N   L +S     G+    L  +D    N    T  +         SP+   V 
Sbjct: 160 GVSGWINDTTLLLSGKAQPGVRDRELFTLDI--RNGARRTLGQALSFRGVSLSPDGAWVV 217

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS- 286
           Y    D        +      A +++  F +     R+   G+  LI +Q D +  +   
Sbjct: 218 YYVAFDSKARNGLWIRPTAGGAARKLDAFGAY----RWRDAGRLLLIPLQPDGSPHVLRE 273

Query: 287 VDLQSNATERLTNTLFINISASYS--PDSSQIVFESDREGKEQL 328
             ++ NA   L +         +S  PD  ++ + S R G  ++
Sbjct: 274 YRMRENAWRTLGDLGDQVRQGDWSVSPDGQRMAYLSARNGNVRV 317



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 24/205 (11%), Positives = 49/205 (23%), Gaps = 14/205 (6%)

Query: 175 SRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +R+ +          +    + V D  GA  +  T     +        N   +  +   
Sbjct: 121 TRLAYTRSDTTGNFDRRLSRVYVADVFGAPRQVATLYGGGVSGWI----NDTTLLLSGKA 176

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD--IYSVDLQ 290
              +    L    I    +R             S +G   +  V  D      ++     
Sbjct: 177 QPGVRDRELFTLDIRNGARRTLGQALSFRGVSLSPDGAWVVYYVAFDSKARNGLWIRPTA 236

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             A  +L           +      ++     +G   +        +  R   D      
Sbjct: 237 GGAARKLDAFGAY----RWRDAGRLLLIPLQPDGSPHVLREYRMRENAWRTLGDLGDQVR 292

Query: 351 DPVWS--PQGDLIAFTKFSGEKFAI 373
              WS  P G  +A+         +
Sbjct: 293 QGDWSVSPDGQRMAYLSARNGNVRV 317



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/223 (12%), Positives = 68/223 (30%), Gaps = 24/223 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+ + + +                    +  R   F S+     FS    +   +V+ 
Sbjct: 37  WTPDSKALLFLDGPPARPATGIYQVPATGGSVTR--RFSSVAF---FSP---KLAWAVRP 88

Query: 279 DEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFE-SDREGK-----EQLYVM 331
                     L      R T  T   ++  +++   +++ +  SD  G       ++YV 
Sbjct: 89  GNGDATTLERLSDG--RRFTLPTRGADV--TWTRAETRLAYTRSDTTGNFDRRLSRVYVA 144

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVED 389
              G+ ++  +           W     L+   K         +  +       R L + 
Sbjct: 145 DVFGAPRQVATLYGGGVSG---WINDTTLLLSGKAQPGVRDRELFTLDIRNGARRTLGQA 201

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            + +  + SP G  +++    D    + L+     G     ++
Sbjct: 202 LSFRGVSLSPDGAWVVYYVAFDSKARNGLWIRPTAGGAARKLD 244


>gi|170760302|ref|YP_001788094.1| hypothetical protein CLK_2163 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169407291|gb|ACA55702.1| hypothetical protein CLK_2163 [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 429

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 85/223 (38%), Gaps = 32/223 (14%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  +  Y   D      +  ++       K   +F S I       +G+       +   
Sbjct: 111 SGNEKIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNIW-----ISGQWLYYINYRGGN 165

Query: 282 MD--IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQLYVMQSN 334
            +  +Y +    ++ ERLTNT  I+ S  +S +    +F      S  +   ++Y ++ +
Sbjct: 166 EENCLYRIKKDGSSRERLTNTT-ID-SLVFSDN---YIFYSEYISSSSKDNYKIYRIKKD 220

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           GS++  +S  +  +         G  + +       ++I  ++ DG   + +   +N  +
Sbjct: 221 GSNKIALSNVRGINLIIQ-----GPFLYYLNIED-NYSIYRIRIDGLDMKKI---NNYSS 271

Query: 395 PTWS--PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            ++     G  + +    + + G+ LY   L+G  E  +N  +
Sbjct: 272 RSFIRIKDG-WIYYI---NEELGNNLYRTTLDGNYEEKLNNDS 310



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 76/190 (40%), Gaps = 31/190 (16%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--L 328
           +    +  +   +I  ++L  +   +L +    NI  S       + + + R G E+  L
Sbjct: 115 KIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNIWIS----GQWLYYINYRGGNEENCL 170

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQER 384
           Y ++ +GS ++R++     +    V+S     I ++      S + + I  +KKDGS + 
Sbjct: 171 YRIKKDGSSRERLT---NTTIDSLVFSDN--YIFYSEYISSSSKDNYKIYRIKKDGSNKI 225

Query: 385 LLVEDSNLQAPTWSPSGRSLI---FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            L     +           +I   F    + +    +Y I ++G +   IN  +  S  +
Sbjct: 226 ALSNVRGIN---------LIIQGPFLYYLNIEDNYSIYRIRIDGLDMKKINNYSSRSFIR 276

Query: 442 ----WVGFMD 447
               W+ +++
Sbjct: 277 IKDGWIYYIN 286


>gi|123508237|ref|XP_001329589.1| WD repeat protein [Trichomonas vaginalis G3]
 gi|121912635|gb|EAY17454.1| WD repeat protein, putative [Trichomonas vaginalis G3]
          Length = 433

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 77/234 (32%), Gaps = 17/234 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +++  S    +++ + D               I+    FS + + +   ++D+     V 
Sbjct: 200 TKTFASSSSDHTVRLYDLTTGQFHTELLGHTDIVPHIEFSNDGEIILTGSFDN----TVK 255

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L D R       +      I A  F     + L S  +D    I+  DL++N    + + 
Sbjct: 256 LWDIRSGSEISSLNGHTDDIFAAHFDFPCNKVL-SASQDGTALIW--DLRTNQAIAIMDG 312

Query: 301 LFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQ 357
                  A +S D + I       G     +   +G   K++   +         ++SPQ
Sbjct: 313 HGGGCTDACWSADGNYIA---TGAGDAVARIWDIDG---KKLFDCRGHTGEINRVMFSPQ 366

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              +           +         + L    + +    ++ SG+ +I + + +
Sbjct: 367 STRLLTASVDNS-CKLWDTSTGLCVDTLKSHTNEIVCAAFNYSGKYIITASQDN 419



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/300 (14%), Positives = 89/300 (29%), Gaps = 44/300 (14%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            R+WD    K++              + H                FN+ I  +  +  + 
Sbjct: 127 CRIWDTLSGKELHCL-----------MGHK---QTVNVCC-----FNNPIGDLLGTGSAD 167

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                  +         Y        +   +F    +  A ++ D      V L D    
Sbjct: 168 KTSK---IWKVGTGECLYTFTGHTDQVINIKFENETKTFASSSSDH----TVRLYDLTTG 220

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +    +     ++    FS++G   +++   D  + ++  D++S +     N    +I A
Sbjct: 221 QFHTELLGHTDIVPHIEFSNDG-EIILTGSFDNTVKLW--DIRSGSEISSLNGHTDDIFA 277

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++       V  + ++G   ++      +    I         D  WS  G+ IA     
Sbjct: 278 AHFDFPCNKVLSASQDGTALIW--DLRTNQAIAIMDGHGGGCTDACWSADGNYIA---TG 332

Query: 368 GEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                  +   DG   + L +       +    +SP    L+ +     D   KL+    
Sbjct: 333 AGDAVARIWDIDG---KKLFDCRGHTGEINRVMFSPQSTRLLTASV---DNSCKLWDTST 386


>gi|224537300|ref|ZP_03677839.1| hypothetical protein BACCELL_02178 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521075|gb|EEF90180.1| hypothetical protein BACCELL_02178 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 716

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 45/321 (14%), Positives = 103/321 (32%), Gaps = 56/321 (17%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             +++ Y +++G      +  L+V++  V+   +  +C         + +  +   I   
Sbjct: 143 KAANEDYNTVSGHIAYTLNNNLYVNDRAVTNEPEGIVCG--------QSVHRNEFGISKG 194

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRID-----------------------RAPKRI 253
             +SP    +A+   D+  + +  L+D                             P+  
Sbjct: 195 TYWSPKGDLLAFYRMDESMVTQYPLVDITARVGELNNVRYPMAGMTSHKVTVGIYNPETQ 254

Query: 254 GNFRSMILAP--------RFSSNGKRA-LISVQKDEA-MDIYSVDLQSNATERLTNTLFI 303
                    P         ++ + K   LI + +D+    +    +++     L  TLF 
Sbjct: 255 KTIYLNAGDPTDRYFTNISWALDAKSLYLIELNRDQNHAKLCQYSVETGE---LIGTLFE 311

Query: 304 NISASYSP----------DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                Y            D+S+ +++S R+G   LY+  ++G   K+++           
Sbjct: 312 ETHPKYVEPQHPIVFLPWDNSKFIYQSQRDGFNHLYLYGTDGKLVKQLTSGNWLVQDVLG 371

Query: 354 WSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           ++     I      +S  +  +  +     +   L     +   T S SG  LI +    
Sbjct: 372 FNSGKKEIIIASTEYSPLQSNLFKVSIATGKRSPLGTPEGIHHGTLSASGSYLIDTYSSP 431

Query: 412 GDTGSKLYSIDLNGRNETLIN 432
               S        G++  L+ 
Sbjct: 432 EVPRSINLIATQTGKSINLLT 452


>gi|195377896|ref|XP_002047723.1| GJ11768 [Drosophila virilis]
 gi|194154881|gb|EDW70065.1| GJ11768 [Drosophila virilis]
          Length = 608

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 71/212 (33%), Gaps = 21/212 (9%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           I+D   +          S   F   S      K  +     D  N  +L  +  Q +  P
Sbjct: 56  IADVYTEHSCAVNVAKYSPSGFYIASG-DASGKIRIW----DTVNKEHLLKNEFQPIVGP 110

Query: 218 ----RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                +SP+ Q++       E    V++ +T      +  G  + +  A  F       +
Sbjct: 111 IKDISWSPDNQRIVAVGEGRERFGHVFMSETGTS-VGEISGQSKPINSA-DFRPARPFRI 168

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           ++  +D  + I+          +  ++ F+     YSPD       +  +GK  LY    
Sbjct: 169 VTGSEDNTIGIFEGPPFKFKMTKQEHSRFVQAV-RYSPDGKYFA-SAGFDGKVFLY---- 222

Query: 334 NGSDQKRI----SQDKEASYFDPVWSPQGDLI 361
           +G+  + +    S   +   +   W P G  +
Sbjct: 223 DGTSSELLGEFGSPAHKGGVYAVAWKPDGTQL 254



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 68/222 (30%), Gaps = 18/222 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   ++SP+   +A  + D    +R++    +              I    +
Sbjct: 59  VYTEHSCAVNVAKYSPSGFYIA--SGDASGKIRIWDTVNKEHLLKNEFQPIVGPIKDISW 116

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S + +R +   +  E      +     +   ++       SA + P     +     +  
Sbjct: 117 SPDNQRIVAVGEGRERFGHVFMSETGTSVGEISGQSKPINSADFRPARPFRIVTGSED-- 174

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + + +      K   Q+         +SP G   A   F G+ F       DG+   L
Sbjct: 175 NTIGIFEGPPFKFKMTKQEHSRFVQAVRYSPDGKYFASAGFDGKVFLY-----DGTSSEL 229

Query: 386 L------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           L           + A  W P G  L+      GD   +L+ +
Sbjct: 230 LGEFGSPAHKGGVYAVAWKPDGTQLL---TCSGDKTCRLWQV 268


>gi|111221197|ref|YP_711991.1| WD-40 repeat-containing protein [Frankia alni ACN14a]
 gi|111148729|emb|CAJ60405.1| Putative WD-40 repeat protein [Frankia alni ACN14a]
          Length = 494

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 80/258 (31%), Gaps = 19/258 (7%)

Query: 187 GIIKNSLCVMDR-DGANIRYL---TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           G+   ++ + D  D    + L     + D +++   F P+++ +A    D      V L 
Sbjct: 211 GLDDGTVWLWDVTDPLRPQRLSGPLAADDDVVWSVTFVPDRRTLAIGGSDG----TVRLW 266

Query: 243 DTRIDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +      P  IG       A      + +G+   I             D        +  
Sbjct: 267 NLADPHHPHPIGGPLPDSRAMDSLMLAPDGRTLAIGGSDGTVRLWNLADPHHPDPIGVLT 326

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                 S  ++PD   +      +G  +L+ V   +             +     ++  G
Sbjct: 327 GSHEVDSMVFAPDGRTLA-VGGSDGTVRLWDVADPHAPHPLGDPLIGRYTAGSLAFASDG 385

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             +A    S   +   +      Q       +    ++ T++P+GR++        D   
Sbjct: 386 RTLAVGNGSQTLWVWDIADPHHLQPLGEPFTDGHMPESFTFAPNGRTIA---AGFNDGIM 442

Query: 417 KLYSIDLNGRNETLINTP 434
           +L+ +  +  +   I  P
Sbjct: 443 QLWDV-ADPHHPRPIGAP 459



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 57/173 (32%), Gaps = 12/173 (6%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS---- 310
             R  + +  F+ + +   + +  D  + ++ V       +RL+  L  +    +S    
Sbjct: 191 GHRDAVWSMAFTPDSRTLAVGLD-DGTVWLWDV-TDPLRPQRLSGPLAADDDVVWSVTFV 248

Query: 311 PDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           PD   +      +G  +L+ +   +             +    + +P G  +A     G 
Sbjct: 249 PDRRTLA-IGGSDGTVRLWNLADPHHPHPIGGPLPDSRAMDSLMLAPDGRTLAIGGSDGT 307

Query: 370 KFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                +          +L     + +  ++P GR+L        D   +L+ +
Sbjct: 308 VRLWNLADPHHPDPIGVLTGSHEVDSMVFAPDGRTLAVG---GSDGTVRLWDV 357


>gi|325498165|gb|EGC96024.1| hypothetical protein ECD227_2262 [Escherichia fergusonii ECD227]
          Length = 625

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 82/257 (31%), Gaps = 32/257 (12%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T            S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSLI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS- 310
              + +        S + K  L+        +I  ++  ++  E   +    +     S 
Sbjct: 440 TGTSGKPGAWVMALSPDEKTLLVPGA--GRGNIVRINTITHQKE---DFPAGDARGVVSA 494

Query: 311 ----PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
               P + +++F  D +G  ++       S   +      + Y     SP G  +A   +
Sbjct: 495 MGFRPKNGEVIFA-DSQGISRISTGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSY 551

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             + + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D    
Sbjct: 552 GLQGYVI-LLNINTGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT-- 602

Query: 427 NETLINTPAYASDPQWV 443
               ++  A    PQ+ 
Sbjct: 603 --RSLDPQAIIRHPQYG 617



 Score = 37.7 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 55/150 (36%), Gaps = 24/150 (16%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
            P + R     I+   +Q      GD    +  +     +G       V+  D   I  +
Sbjct: 462 VPGAGRGNIVRINTITHQKEDFPAGDARGVVSAMGFRPKNGE------VIFADSQGISRI 515

Query: 207 TPSRDQILFEPRF-----------SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +    Q     ++           SP+ Q +A  +Y  +  + +  ++T      + IG 
Sbjct: 516 STGDQQASIMTQWCSRSVYSVEGISPDGQYLALVSYGLQGYVILLNINTG-----QIIGV 570

Query: 256 FR-SMILAPRFSSNGKRALISVQKDEAMDI 284
           +  S +   RFS++G++    + K+  + +
Sbjct: 571 YPASYVNHLRFSADGRKI-FVMAKNGLIQM 599


>gi|325184121|emb|CCA18579.1| conserved hypothetical protein [Albugo laibachii Nc14]
 gi|325186034|emb|CCA20536.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 532

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 60/146 (41%), Gaps = 9/146 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +S+       +  K   + I+S+   ++ T +++  +    S S+ PDS  ++  SD  
Sbjct: 98  AWSTGSVLIAAASFKRGILQIWSI-KDTSWTCKISEGIAGLTSFSWLPDSLHVITVSD-- 154

Query: 324 GKEQLY--VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              QLY  V       +K I   K ++      SP G+L+A  + S  K  +GV      
Sbjct: 155 --FQLYATVWSLRDRSKKVIRHPKLSASDGFASSPDGNLLAVVERSQCKDYLGVYDSKKW 212

Query: 382 QERL--LVEDSNLQAPTWSPSGRSLI 405
           + +    ++  +     W+P   ++ 
Sbjct: 213 ELQAHFALQSYDCVQVAWAPDNCAIA 238



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 74/222 (33%), Gaps = 9/222 (4%)

Query: 194 CVMDRDGANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           C+  RD   ++ +     + ++    +S     +  A      IL+++ +         +
Sbjct: 73  CLCIRDEQTLQIIQQYTANDVIQSIAWS-TGSVLIAAASFKRGILQIWSIKDTSWTC--K 129

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           I    + + +  +  +    +          ++S+  +S    R       +  AS SPD
Sbjct: 130 ISEGIAGLTSFSWLPDSLHVITVSDFQLYATVWSLRDRSKKVIRHPKLSASDGFAS-SPD 188

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            + +      + K+ L V  S   + +     +        W+P    IA    +  ++ 
Sbjct: 189 GNLLAVVERSQCKDYLGVYDSKKWELQAHFALQSYDCVQVAWAPDNCAIAVADNT-LEYR 247

Query: 373 IGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +     DG   S      +   L+  TWSP G  +      D
Sbjct: 248 VLFYLPDGTLLSNYEAYKDALGLRVMTWSPGGDFIALGSYDD 289


>gi|256394806|ref|YP_003116370.1| hypothetical protein Caci_5670 [Catenulispora acidiphila DSM 44928]
 gi|256361032|gb|ACU74529.1| conserved hypothetical protein [Catenulispora acidiphila DSM 44928]
          Length = 346

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 71/204 (34%), Gaps = 32/204 (15%)

Query: 264 RFSSNGKRALISVQKDE--------AMDIYSVDLQSNA-TERL-TNTLFINISA------ 307
           R S++G+ A  +             +     +DL++    + L +   F+N S       
Sbjct: 145 RLSADGRMAAWTTFVTGDSYTQPGASTRASILDLKTGEYVDSLESFNAFVNGSPYKAVDI 204

Query: 308 -----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                +++ D +   F +      + ++M+ +             +   P  SP G  + 
Sbjct: 205 NFWGVTFAADDNT--FYATMGSTSKTWLMKGDFKAHTL--HSLRENVECPSLSPDGTRLV 260

Query: 363 FTKFSGEK----FAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSK 417
           F K   +     +   V+     +E  L E  +      W  +  +++++   D D GS 
Sbjct: 261 FKKRVSDDIRHPWRFTVLNLATMRETPLAETRSVDDQAAWL-NTTTVMYAVPHDDDPGSD 319

Query: 418 LYSIDLNGRNETLINTPAYASDPQ 441
           LY++  +G     +   A    P 
Sbjct: 320 LYAVPADGSGAPRL-LAANGMSPS 342



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/94 (17%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 253 IGNFRSMILAPRFSSNGKRALI---SVQKDEAMDIYSV-DLQSNATERLTNTLFINISAS 308
           + + R  +  P  S +G R +              ++V +L +     L  T  ++  A+
Sbjct: 240 LHSLRENVECPSLSPDGTRLVFKKRVSDDIRHPWRFTVLNLATMRETPLAETRSVDDQAA 299

Query: 309 YSPDSSQI-VFESDREGKEQLYVMQSNGSDQKRI 341
           +   ++ +     D +    LY + ++GS   R+
Sbjct: 300 WLNTTTVMYAVPHDDDPGSDLYAVPADGSGAPRL 333


>gi|317030076|ref|XP_001391822.2| WD repeat protein [Aspergillus niger CBS 513.88]
          Length = 1358

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 77/233 (33%), Gaps = 33/233 (14%)

Query: 206 LTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAP 263
           L       + + R+SP +    A AT    D   + L D R   AP  RI        + 
Sbjct: 245 LFHGNSDAVRDIRWSPTDGVMFATAT----DSGAIQLWDCRKSSAPLMRITAHDRPCFSV 300

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-------LTNTLFINIS---ASYS--P 311
            +  +G+  +          +   D  S+A  R        T    +N+     S++  P
Sbjct: 301 DWHPDGRHIV---SGGTDRQVKVWDFSSSAERRQKPTFQFRTPQAVLNVRWRPPSWAREP 357

Query: 312 DSS-----QIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTK 365
           + S       V  S  +   ++++          R     +A   D +W      + +T 
Sbjct: 358 EGSGDWQSSQVVTSYDKEDPRVHLWDLRRPHIPFREFDRYDAHATDLLW--HSKDLLWTV 415

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                F     + D      ++      +  WSPSG  L F++K+   +   L
Sbjct: 416 GEAGAFT----QTDIRYAPQIINQRPTCSVAWSPSGEVLAFAQKRPQRSTLGL 464



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 47/303 (15%), Positives = 90/303 (29%), Gaps = 49/303 (16%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQK---- 225
           G  ++R   +  +  +   K  + +   D +  R +      +IL   R SP+       
Sbjct: 69  GPRSTRSKSLPGASQTVTHKTGIPIAALDISPQRTHAVIGGKEILKTIRVSPDHSSEEFN 128

Query: 226 -----VAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
                ++Y++ +     L     D    R  K        I+A   + NG+  +  +++ 
Sbjct: 129 LRNAIISYSSTHHGGSGLSARHKDQLTVRDVKWSHGEYDQIIATAVA-NGRIVVYDLRRT 187

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             ++       S    RL         AS+    SQ            + +     +  +
Sbjct: 188 G-LECCRFQGHSRQVHRLAFNPH---HASWLLSGSQ---------DSSIRMWDLRTASAE 234

Query: 340 R---------ISQDKEASYFDPVWSP-QGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVE 388
           R         +      +  D  WSP  G + A T        +   +K  +   R+   
Sbjct: 235 RGVLVCGSLDLFHGNSDAVRDIRWSPTDGVMFA-TATDSGAIQLWDCRKSSAPLMRITAH 293

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN----TPAYA-----SD 439
           D    +  W P GR ++       D   K++    +            TP          
Sbjct: 294 DRPCFSVDWHPDGRHIV---SGGTDRQVKVWDFSSSAERRQKPTFQFRTPQAVLNVRWRP 350

Query: 440 PQW 442
           P W
Sbjct: 351 PSW 353


>gi|307133272|ref|YP_003885288.1| putative lipoprotein [Dickeya dadantii 3937]
 gi|306530801|gb|ADN00732.1| Probable lipoprotein [Dickeya dadantii 3937]
          Length = 223

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 21/129 (16%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVS-------IAFTKFV------- 56
           +N K+  C +++        +  +   V T                I+  KF        
Sbjct: 1   MNKKVVFCSMVITATLLGGCATESSRTVETPKVVSYNTPYQGVRSPISVGKFENRSNYMN 60

Query: 57  -----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVL 111
                 +D LG +   ++   LQ++  FN++ + +  +  T      + Q     GA  +
Sbjct: 61  GIFSDGVDRLGNQAKTILVSHLQQTGRFNVLDRTNMDELKTEAGIKGQAQ--TLKGANYV 118

Query: 112 VTGRVIKEG 120
           VTG V + G
Sbjct: 119 VTGDVTEFG 127


>gi|298242904|ref|ZP_06966711.1| serine/threonine protein kinase [Ktedonobacter racemifer DSM 44963]
 gi|297555958|gb|EFH89822.1| serine/threonine protein kinase [Ktedonobacter racemifer DSM 44963]
          Length = 818

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 48/282 (17%), Positives = 93/282 (32%), Gaps = 31/282 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           +    + L ++  DG   + L   PS  Q+    + S + QK+ +  Y       +  + 
Sbjct: 525 NKNGISQLRLLRVDGQEQQTLYCAPSGSQLAEM-QLSYDGQKLVFNQYSGSGGKPLLYLY 583

Query: 244 TRIDRAPKRIGNFRSMILAPRFSS----NGKRALISV----QKDEAMDIYSVDLQSN--- 292
           T      + I   ++   A  +      +  R L+S           D+Y++D+      
Sbjct: 584 TMGTGTLQMILQSQN---AQAYRPMTWLDNNRVLLSSFIPNSGATLNDLYTLDITRGPNQ 640

Query: 293 ---ATERLTNTLFINISASYSPDSSQIVF----ESDRE---GKEQLYVMQSNGSDQKRIS 342
                ++L +  +   S   S DS+++       SD     G   + V    G   + I+
Sbjct: 641 HDADLQKLLSQNWNCGSFDASYDSTKLYVANCGTSDGHTLVGPTTITVQPLTGGTSQVIA 700

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQAPTWSPS 400
              +A       SP   L+     SG+     +  M  DG+    L  D+     +  P 
Sbjct: 701 HLDQAVTMLRAVSPTTLLLLIKNGSGDTSQNGLWRMNTDGTSLTRLSSDTTGGQ-SLCPF 759

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +   +S          L   + +  N  +        DP +
Sbjct: 760 SQY-AWSNVSQDGQLFALQEANPHSANRKMYYGSLDTGDPTY 800



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 39/116 (33%), Gaps = 6/116 (5%)

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---EDS 390
           N      I  +      +   +  G  + +         + +++ DG +++ L      S
Sbjct: 493 NTDKATPILGELNVHINEGQVTQNGQWVVYILNKNGISQLRLLRVDGQEQQTLYCAPSGS 552

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI--NTPAYASDP-QWV 443
            L     S  G+ L+F++         LY   +      +I  +  A A  P  W+
Sbjct: 553 QLAEMQLSYDGQKLVFNQYSGSGGKPLLYLYTMGTGTLQMILQSQNAQAYRPMTWL 608


>gi|293395325|ref|ZP_06639609.1| oligogalacturonide lyase [Serratia odorifera DSM 4582]
 gi|291422009|gb|EFE95254.1| oligogalacturonide lyase [Serratia odorifera DSM 4582]
          Length = 171

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 62/173 (35%), Gaps = 40/173 (23%)

Query: 193 LCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           + +++ DG+ +R + T +  +      + P+   + Y +Y      R       I R   
Sbjct: 1   MWLINEDGSQLRKVKTHAEGESCTHEFWVPDGSALMYVSYMKGRQQR------HICRFDP 54

Query: 252 RIGNFRSMILAPRFSS-----NGKRAL---------------ISVQKDEAMDIYSVDLQS 291
           + G+   ++  P  S      +G   +                S+Q D    +Y  D + 
Sbjct: 55  QSGSDEVLMEMPACSHLMSNHDGSLLVGDGSGTPVDVQDAQGYSIQND--PWLYVFDAKR 112

Query: 292 NATERLTNTLF-----------INISASYSPDSSQIVFESDREGKEQLYVMQS 333
               RL                 +   S++PD  Q++F SD EGK  LY+ + 
Sbjct: 113 RRQARLAAHNSSWRVLDGDRQVTHPHPSFTPDDRQVLFTSDVEGKPALYLAEL 165



 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 58/167 (34%), Gaps = 37/167 (22%)

Query: 284 IYSVDLQSNATERL-TNTLFIN-ISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQK 339
           ++ ++   +   ++ T+    +     + PD S +++ S  +G++Q  +          +
Sbjct: 1   MWLINEDGSQLRKVKTHAEGESCTHEFWVPDGSALMYVSYMKGRQQRHICRFDPQSGSDE 60

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-----------------SQ 382
            + +    S+   + +  G L+      G    + V    G                  Q
Sbjct: 61  VLMEMPACSHL--MSNHDGSLLV---GDGSGTPVDVQDAQGYSIQNDPWLYVFDAKRRRQ 115

Query: 383 ERLLVEDSNLQ-----------APTWSPSGRSLIFSRKKDGDTGSKL 418
            RL   +S+ +            P+++P  R ++F+   +G     L
Sbjct: 116 ARLAAHNSSWRVLDGDRQVTHPHPSFTPDDRQVLFTSDVEGKPALYL 162



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 374 GVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNET 429
            ++ +DGSQ R +    E  +     W P G +L++     G     +   D  +G +E 
Sbjct: 2   WLINEDGSQLRKVKTHAEGESCTHEFWVPDGSALMYVSYMKGRQQRHICRFDPQSGSDEV 61

Query: 430 LINTPA 435
           L+  PA
Sbjct: 62  LMEMPA 67


>gi|149175753|ref|ZP_01854372.1| Tyrosine protein kinase:WD-40 repeat:Serine/threonine protein
           kinase [Planctomyces maris DSM 8797]
 gi|148845472|gb|EDL59816.1| Tyrosine protein kinase:WD-40 repeat:Serine/threonine protein
           kinase [Planctomyces maris DSM 8797]
          Length = 355

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/263 (12%), Positives = 70/263 (26%), Gaps = 64/263 (24%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDE------DILRVYLMDTRIDRAPKRIGNFRSMIL 261
                ++ +  FS + + +A             D  +  + D    +      +F+    
Sbjct: 45  NGNTSVISDLEFSSDSKMLAVTYGRFRGLLQKPDPGQAIVWDVASGKRLATFNSFKDGGS 104

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVD--------------------------------- 288
           +  FS +GK    +   D ++  + V                                  
Sbjct: 105 SVDFSKDGKLLA-TGSYDGSVQFWRVKDWSRQVRIELDSESVTTLDFSPDSTSIAVGTIV 163

Query: 289 ---------------LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                                + L       +   +S D   +V    R     + V   
Sbjct: 164 GEEDALKPNLHLYKVATGREMKSLRCPADDVVGVQFSLDGKSLVCAGMRG---VVQVWNV 220

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIA----FTKFSGEKFAIGVMKKDGSQERL--LV 387
                + I Q  +   F    S  G LIA      ++  +K+ I +   +  + +     
Sbjct: 221 QTDTSRTILQPDDLMLFSMAVSHDGQLIAAGGSLFQYKHKKWQIQIWDTESGKLKQDKTE 280

Query: 388 EDSNLQAPTWSPSGRSLIFSRKK 410
               L +  ++P  R L+ + + 
Sbjct: 281 TGGMLSSIRFTPDDRWLVIASRH 303


>gi|333026081|ref|ZP_08454145.1| putative peptide hydrolase [Streptomyces sp. Tu6071]
 gi|332745933|gb|EGJ76374.1| putative peptide hydrolase [Streptomyces sp. Tu6071]
          Length = 609

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 14/165 (8%)

Query: 262 APRFS--------SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           APR S         +  R+L         ++Y+ D  + A  ++T+        + SPD 
Sbjct: 24  APRVSLPEWAEDAPD--RSLFVSNATGTYELYAWDRATGAQRQVTDRENGTTDGTLSPDG 81

Query: 314 SQIVFESDREGKE-QLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           + I +  D +G E  ++  Q  + G D + +     A          G  +     S E 
Sbjct: 82  AWIWWFDDHDGDEFGVWRRQPFAGGEDAEALPGVAAAYSAGLALGRDGRTVVVGSSSDEH 141

Query: 371 FAI-GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            ++  V++  G+   +     +      S  G  L+    + GD 
Sbjct: 142 GSLVHVVRDAGAPVEVYRHRESAGVGDLSYDGSLLVVEHTEHGDA 186



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 73/265 (27%), Gaps = 40/265 (15%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +    R   +  P ++ +    +    +      +Y  D R   A +++ +  +    
Sbjct: 16  PDWEKRFRAPRVSLPEWAEDAPDRSLFVSNATGTYELYAWD-RATGAQRQVTDRENGTTD 74

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS------ASYSP----- 311
              S +G         D          +     R       +        A+YS      
Sbjct: 75  GTLSPDGAWIWWFDDHDGD--------EFGVWRRQPFAGGEDAEALPGVAAAYSAGLALG 126

Query: 312 -DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D   +V  S  +    L  +  +      + + +E S      S  G L+         
Sbjct: 127 RDGRTVVVGSSSDEHGSLVHVVRDAGAPVEVYRHRE-SAGVGDLSYDGSLLVVEHTEHGD 185

Query: 371 ---FAIGVMKK-DGSQERLL------VEDSNLQ----APTWSP---SGRSLIFSRKKDGD 413
               A+ V++  +G +           E    +       ++P     R L+   +++G 
Sbjct: 186 AMHSALRVLELGEGGEVSRTVAELDDTEGGTKELGLSVMGFAPLAGDARLLV-GTQREGR 244

Query: 414 TGSKLYSIDLNGRNETLINTPAYAS 438
               ++           I+ P   S
Sbjct: 245 WLPMIWDPLAGTETALAIDLPGDVS 269


>gi|302520169|ref|ZP_07272511.1| peptide hydrolase [Streptomyces sp. SPB78]
 gi|302429064|gb|EFL00880.1| peptide hydrolase [Streptomyces sp. SPB78]
          Length = 609

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 14/165 (8%)

Query: 262 APRFS--------SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           APR S         +  R+L         ++Y+ D  + A  ++T+        + SPD 
Sbjct: 24  APRVSLPEWAEDAPD--RSLFVSNATGTYELYAWDRATGAQRQVTDRENGTTDGTLSPDG 81

Query: 314 SQIVFESDREGKE-QLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           + I +  D +G E  ++  Q  + G D + +     A          G  +     S E 
Sbjct: 82  AWIWWFDDHDGDEFGVWRRQPFAGGEDAEALPGVAAAYSAGLALGRDGRTVVVGSSSDEH 141

Query: 371 FAI-GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            ++  V++  G+   +     +      S  G  L+    + GD 
Sbjct: 142 GSLVHVVRDAGAPVEVYRHRESAGVGDLSYDGSLLVVEHTEHGDA 186



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 73/265 (27%), Gaps = 40/265 (15%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +    R   +  P ++ +    +    +      +Y  D R   A +++ +  +    
Sbjct: 16  PDWEKRFRAPRVSLPEWAEDAPDRSLFVSNATGTYELYAWD-RATGAQRQVTDRENGTTD 74

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS------ASYSP----- 311
              S +G         D          +     R       +        A+YS      
Sbjct: 75  GTLSPDGAWIWWFDDHDGD--------EFGVWRRQPFAGGEDAEALPGVAAAYSAGLALG 126

Query: 312 -DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D   +V  S  +    L  +  +      + + +E S      S  G L+         
Sbjct: 127 RDGRTVVVGSSSDEHGSLVHVVRDAGAPVEVYRHRE-SAGVGDLSYDGSLLVVEHTEHGD 185

Query: 371 ---FAIGVMKK-DGSQERLL------VEDSNLQ----APTWSP---SGRSLIFSRKKDGD 413
               A+ V++  +G +           E    +       ++P     R L+   +++G 
Sbjct: 186 AMHSALRVLELGEGGEVSRTVAELDDTEGGTKELGLSVMGFAPLAGDARLLV-GTQREGR 244

Query: 414 TGSKLYSIDLNGRNETLINTPAYAS 438
               ++           I+ P   S
Sbjct: 245 WLPMIWDPLAGTETALAIDLPGDVS 269


>gi|91782525|ref|YP_557731.1| hypothetical protein Bxe_A3304 [Burkholderia xenovorans LB400]
 gi|91686479|gb|ABE29679.1| Hypothetical protein Bxe_A3304 [Burkholderia xenovorans LB400]
          Length = 385

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 91/335 (27%), Gaps = 48/335 (14%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK-------QIIGKKFFSSPASWRKIAHTIS 159
           G   ++ G       + L V +R +D K  +       Q +   +       R +     
Sbjct: 21  GVYDMLVGTYTGGRSEGLYV-YR-FDTKTGEATRVSVAQTVNPSYLVVSRDRRFV----- 73

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQILFEPR 218
                 + G+ G    R    +    +   + + L  +  +G +  YL+ S D       
Sbjct: 74  -YAVNELPGDNGPATQRGGISAFRFDAASGQLTFLNQVSSEGNDPCYLSLSPDGRYLLSA 132

Query: 219 -----FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                  P      +    D  +    L        P +     S + +  FS +G    
Sbjct: 133 NYSVAADPGGSFAVFPLQADGQVGASVLTVHHEGGGPVKGRQDNSHVHSTVFSPDGHYLF 192

Query: 274 ISVQKDEAMDIYSVDLQSNAT------ERLTNTLFINISAS---YSPDSSQIVFESDREG 324
                 + +  Y                R T             +  D       S+  G
Sbjct: 193 AQDLGADKLYSYRYTPDGRRGLFGPTDWRYTQEKA-GTGPRHLVFGADGKHAYLTSELAG 251

Query: 325 KEQLYVMQSNGSDQKRIS--------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              +     N     ++                     SP G  + +    G+   I + 
Sbjct: 252 T--VSTFDYNDGKLTQVQTLALTEPGFKGAVGGSAIHLSPDGRFL-YASNRGDANDIVIF 308

Query: 377 KKD---GSQERLLVEDSNLQAPT-WS--PSGRSLI 405
             D   G  +++  + S  ++P  ++  P+G  LI
Sbjct: 309 SVDPANGHLKKIGHQSSLGKSPREFAIDPTGNWLI 343


>gi|329907299|ref|ZP_08274614.1| peptidase, S9C (acylaminoacyl-peptidase) family [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327547024|gb|EGF31913.1| peptidase, S9C (acylaminoacyl-peptidase) family [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 657

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/371 (13%), Positives = 109/371 (29%), Gaps = 50/371 (13%)

Query: 93  NPDSIPRFQDW------NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS 146
           +  +I  +  W       ++ A+ +   +    G     +E R  + + R  I+      
Sbjct: 8   SQHTIAPYGAWLSPITSAAIVAESVGLDQPAIAGDTIYWIEGRARE-QGRSVIVRHAADG 66

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           S A        +   +++   G        + F      S      L     D A  + L
Sbjct: 67  STADLTATGFNVRSRVHEYGGGAVCIDGDVLYF------SNHADQRLYRQQGD-AAPQAL 119

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILR----VYLMDTRIDRAPKRIGNFRSMILA 262
           T S      +      + ++     D  D  R      +  +  D +   +        +
Sbjct: 120 TASGAMRFADAVLDRARDRLIAIREDHGDTTREAVNTLVAISLADGSETVLLEGHDFYAS 179

Query: 263 PRFSSNGKRALISVQKD------EAMDIY----SVDLQSNATERLTNTLFINI---SASY 309
           PR S +G +    +  D      +  D++    ++D       ++     I+      ++
Sbjct: 180 PRLSPDGSQLAW-LNWDHPNMPWDGTDLWCASVALDGSLGTPRKI--AGGIDDPIFQPAW 236

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS--------PQGDLI 361
           SP      F S++ G   LY +     +  +      A +  P+W+             I
Sbjct: 237 SPSGELH-FVSEQSGWWNLYRLH---GETVQALCPMAAEFGRPLWNVGISTYGFDGSGRI 292

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYS 420
             +      + + V+  D      +       +     P    ++F      D    +  
Sbjct: 293 VCSYVQDGDWQLAVLDPDSGVLTNIATPFRKISDLQVGPD--FVVFIGGAP-DESDAIVR 349

Query: 421 IDLNGRNETLI 431
           +DL      ++
Sbjct: 350 LDLQTGEHRIL 360



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 41/238 (17%), Positives = 86/238 (36%), Gaps = 35/238 (14%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   + ++ + D+ + R      + D AP+ +    +M  A       +  LI++++D  
Sbjct: 93  DGDVLYFSNHADQRLYR-----QQGDAAPQALTASGAMRFADAVLDRARDRLIAIREDHG 147

Query: 282 MD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY----- 329
                    + ++ L   +   L        S   SPD SQ+ +  + +     +     
Sbjct: 148 DTTREAVNTLVAISLADGSETVLLEGHDFYASPRLSPDGSQLAWL-NWDHPNMPWDGTDL 206

Query: 330 -----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                 +  +    ++I+   +   F P WSP G+ + F       + +  +  +  Q  
Sbjct: 207 WCASVALDGSLGTPRKIAGGIDDPIFQPAWSPSGE-LHFVSEQSGWWNLYRLHGETVQA- 264

Query: 385 LLVEDSNLQAPTWSP-------SGR-SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           L    +    P W+         G   ++ S  +DGD   +L  +D +    T I TP
Sbjct: 265 LCPMAAEFGRPLWNVGISTYGFDGSGRIVCSYVQDGDW--QLAVLDPDSGVLTNIATP 320



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 17/148 (11%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   + F +  +  ++LY  Q + + Q   +          +   +  LIA  +  G+  
Sbjct: 93  DGDVLYFSNHAD--QRLYRQQGDAAPQALTASGAMRFADAVLDRARDRLIAIREDHGDTT 150

Query: 372 A------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT---GSKLY--S 420
                  + +   DGS+  LL       +P  SP G  L +      +    G+ L+  S
Sbjct: 151 REAVNTLVAISLADGSETVLLEGHDFYASPRLSPDGSQLAWLNWDHPNMPWDGTDLWCAS 210

Query: 421 IDLNGRNETLINTPAYASD----PQWVG 444
           + L+G   T         D    P W  
Sbjct: 211 VALDGSLGTPRKIAGGIDDPIFQPAWSP 238


>gi|327542773|gb|EGF29237.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Rhodopirellula baltica WH47]
          Length = 318

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 59/156 (37%), Gaps = 17/156 (10%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL----------TNTLFINISASYSPDSSQIVFESD 321
             ++ +  +   ++ VDL +    ++          T         ++  DS+++++ S+
Sbjct: 150 LAVTERGHQRFRLFDVDLLTGKVTKVIDEQSETFIWTTHKTDLPRWTFLEDSNEVIWVSE 209

Query: 322 REGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLI------AFTKFSGEKFAIG 374
           ++G + LY++  +G S+ + I++ +           +  LI                   
Sbjct: 210 KDGYQHLYLVDLSGNSEIRPITRGEFVVRGIENIDEENRLIDLVVSGVHEGQDPYLKHYA 269

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            +   G    LL + +     T+SP   SL+ +  +
Sbjct: 270 RVDFRGENFTLLTDANGTHTATFSPDRSSLVVTHSR 305


>gi|330801038|ref|XP_003288538.1| hypothetical protein DICPUDRAFT_152778 [Dictyostelium purpureum]
 gi|325081441|gb|EGC34957.1| hypothetical protein DICPUDRAFT_152778 [Dictyostelium purpureum]
          Length = 358

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 88/276 (31%), Gaps = 26/276 (9%)

Query: 165 SITGEKGDFNS-RILFVSESVVSGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRFSPN 222
            +TG KG+  + +      ++ SG     + + +  G  I Y +       + E  +S +
Sbjct: 60  QLTGHKGEVYTCKFNSYGTALASGGFDKEIFLWNVYGECINYSVLKGHKGTILELHWSTD 119

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             ++  A  D      + + D       KRI    +++ +   +  G   + S   D   
Sbjct: 120 SNEIYSACTDK----SIGVWDANKGELIKRIREHTAVVNSCYPARRGPPLVASGSDDGTA 175

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL-YVMQSNGSDQKRI 341
            ++  D +S  +       +   S  +S  S Q++      G + +  +      ++  I
Sbjct: 176 RVF--DTRSKGSTHTLKHKYPITSVCFSDASDQLI----SGGLDNIIRIWDLRNDEEPLI 229

Query: 342 SQDKEASYFDP-VWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQA---- 394
           + +           S  G  +          ++ I          +  +   N       
Sbjct: 230 TMNGHQDTISGMSVSKDGAYLLSNSMDNTLRQWDIRPYAPQNRNIKTFIGAQNNFEKNLI 289

Query: 395 -PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             ++SP  R +       G +  ++Y  D N     
Sbjct: 290 KCSFSPDSRRVA-----TGSSDRQVYIWDSNTTKIQ 320


>gi|302676315|ref|XP_003027841.1| hypothetical protein SCHCODRAFT_237857 [Schizophyllum commune H4-8]
 gi|300101528|gb|EFI92938.1| hypothetical protein SCHCODRAFT_237857 [Schizophyllum commune H4-8]
          Length = 1088

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 71/211 (33%), Gaps = 27/211 (12%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                +++    R  R         + + +PR S   +R   S       +   V    +
Sbjct: 570 PSKGRQLWRNALRTIRLANAGAASPTAVSSPR-SP--QRQRTSSSTPGMSEPIKVPPSKS 626

Query: 293 ATERLTN-------------TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               L                  +     +SPD   +   S  +    ++ +  +     
Sbjct: 627 RVTVLVQKLRELEPTQEIAAHSALVRHLQFSPDGKYLA-TSSWDRTSIVFKVG-DPLVPH 684

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           R     +       WSP+G+L+  TKFS     +  M ++G   R +    N+++ TW P
Sbjct: 685 RTLAHTQGFVGQVAWSPKGNLLL-TKFS-RGMKVW-MAENGVCMRTIDRGRNVESITWFP 741

Query: 400 SGRSLIFSRKK----DGDTGSKLYSIDLNGR 426
            G    F   +    DG  G+ +  +++ GR
Sbjct: 742 DGN--AFLSVETDLTDGMVGTVVTKLNIKGR 770



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 41/112 (36%), Gaps = 11/112 (9%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
              ++   +FSP+ + +A +++D      +           + + + +  +    +S  G
Sbjct: 647 HSALVRHLQFSPDGKYLATSSWDR---TSIVFKVGDPLVPHRTLAHTQGFVGQVAWSPKG 703

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES 320
              L    +   + +     ++    R T     N+ + ++ PD +   F S
Sbjct: 704 NLLLTKFSRGMKVWM----AENGVCMR-TIDRGRNVESITWFPDGN--AFLS 748


>gi|296202001|ref|XP_002748404.1| PREDICTED: notchless protein homolog 1 isoform 2 [Callithrix
           jacchus]
          Length = 461

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/329 (13%), Positives = 94/329 (28%), Gaps = 87/329 (26%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------------------ 227
           SG    ++   D       +        +    +SP+ +K+A                  
Sbjct: 131 SGSGDTTVRFWDLGTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWEPLHVNP 190

Query: 228 ---YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
              Y     +D   V + DT   R  + +      +   R+  +G   L S  +D  + +
Sbjct: 191 ECRYVASSSKDG-SVRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQDRTIKV 247

Query: 285 Y-------------------SVDLQSNATERLTNTLFINISASYSPDS--------SQIV 317
           +                   ++ L ++    L    F    AS +P           +  
Sbjct: 248 WRAHDGVLCRTLQGHGHWVNTMALSTDYA--LRTGAFEPAEASVNPQDLQGSLQEVKERA 305

Query: 318 ---FESDREGKEQ------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              +   R    +            L+    +     R++   +A     ++SP   ++A
Sbjct: 306 LSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMT-GHQALINQVLFSPDSRIVA 364

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKL 418
              F  +   +     DG   + L       A      WS   R L+       D+  K+
Sbjct: 365 SASFD-KSIKLW----DGRTGKYLASLRGHVAAVYQIAWSADSRLLV---SGSSDSTLKV 416

Query: 419 YSIDLNGRNETLINTPAYASD---PQWVG 444
           + +      +  I+ P +A +     W  
Sbjct: 417 WDVKA---QKLAIDLPGHADEVYAVDWSP 442



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 46/170 (27%), Gaps = 30/170 (17%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +      T   T       
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---GTETPHFTCKGHRHW 158

Query: 304 NISASYSPDSSQIV---------------------FESDREGKEQLYVMQSNGSDQKRIS 342
            +S S+SPD  ++                      + +       + +  +     +RI 
Sbjct: 159 VLSISWSPDGKKLASGCKNGQILLWEPLHVNPECRYVASSSKDGSVRIWDTTAGRCERIL 218

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                S     W   G  + ++        +     DG   R L    + 
Sbjct: 219 TGHTQSVTCLRWGGDG--LLYSASQDRTIKVWRAH-DGVLCRTLQGHGHW 265



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 316 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 372

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 373 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAIDLPGH 431

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 432 ADEVYAVDWSPDGQRVA 448



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 278 RTGAFEPAEASVNPQDLQGSLQEVKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 334

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 335 AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 372

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 373 KLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAI 426

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 427 DLPGHADEVYAVDWSPDGQRVA 448



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 44/147 (29%), Gaps = 32/147 (21%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            A  R T++L  +  A    ++SP    +   S   G   +              +    
Sbjct: 101 RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGS---GDTTVRFWDLGTETPHFTCKGHRH 157

Query: 348 SYFDPVWSPQGDLIA---------------------FTKFSGEKFAIGVMKKD-GSQERL 385
                 WSP G  +A                     +   S +  ++ +     G  ER+
Sbjct: 158 WVLSISWSPDGKKLASGCKNGQILLWEPLHVNPECRYVASSSKDGSVRIWDTTAGRCERI 217

Query: 386 LV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           L     ++    W   G  L++S  +D
Sbjct: 218 LTGHTQSVTCLRWGGDG--LLYSASQD 242


>gi|258571189|ref|XP_002544398.1| periodic tryptophan protein 2 [Uncinocarpus reesii 1704]
 gi|237904668|gb|EEP79069.1| periodic tryptophan protein 2 [Uncinocarpus reesii 1704]
          Length = 908

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 79/223 (35%), Gaps = 14/223 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N  +L       +     + + + +A+ +     +L V+   +      K+ G+  SM 
Sbjct: 286 FNQLHLLSVSQSNIDFVTVNNSGEWLAFGSSKLGQLL-VWEWQSE-SYILKQQGHLDSMN 343

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S +G++  I+   D  + ++ ++         T       +  +S   + ++F +
Sbjct: 344 SL-VYSPDGQKI-ITAADDGKIKVWDIN-SGFCVVTFTEHSASVTACQFSKRGN-VLFTA 399

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G  + + +     + +  +      +      P G+++         F I V     
Sbjct: 400 SLDGSVRAWDL-IRYRNFRTFTAPSRQQFSSLAVDPSGEVVCAGSLD--SFDIHVWSVQT 456

Query: 381 SQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            Q   RL   +  + +  ++  G  L+       D   +L++I
Sbjct: 457 GQLLDRLAGHEGPVSSLAFASDGSHLV---SGSWDRTVRLWNI 496



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 67/240 (27%), Gaps = 35/240 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+   +           RV + D   +++       RS I     S NGK  L+S+ +
Sbjct: 22  FTPDGTCLLSPV-----GNRVSVFDLVHNKSYTLPFAHRSNIARIALSPNGK-LLLSIDE 75

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQ-- 332
                +      +N   R+T   F   S     S+SP          R  + Q++     
Sbjct: 76  QGKAIL------TNFPRRITIYHFSFKSPVSTLSFSPSGRHFAVGIGR--RVQIWCTPST 127

Query: 333 SNGSDQKRISQDKEASYF----------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
                   +       Y           +  WS                   +  +DG +
Sbjct: 128 PGTGASGELEFAPFVLYRDLAGHFDLVQNIRWSGDSRFFLTASKDLTARIWSLDPEDGFE 187

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
              L          W    +  I++  KDG      Y     G      ++     D +W
Sbjct: 188 PTTLAGHREGVVDVWFTDDQESIYTVSKDGALFRWQY-----GSKSNDPDSMGENPDLRW 242


>gi|225387835|ref|ZP_03757599.1| hypothetical protein CLOSTASPAR_01605 [Clostridium asparagiforme
           DSM 15981]
 gi|225046061|gb|EEG56307.1| hypothetical protein CLOSTASPAR_01605 [Clostridium asparagiforme
           DSM 15981]
          Length = 382

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 101/266 (37%), Gaps = 22/266 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYATYD 232
           + ++ F+ ++  +    +S+  MD DG N+R +        L   R+S  ++ + Y   +
Sbjct: 128 SDKVYFLHDNAENPEEPDSIMEMDFDGTNVRTVCSAGYYNDLQYVRYSDGKEMLYYLKGE 187

Query: 233 DEDILRVYLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVD 288
           +E     Y +   D +  +  + +        A  ++ +GK    + +  +   +  ++ 
Sbjct: 188 NEGDGLSYTLCRYDLKTGKEEELL-----KEKAVWYNLDGKYIYYTVLYPEGQGNAIALK 242

Query: 289 ---LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
              L    ++ L +  F+ +   +  +  +I   S    KEQL V   +G   +   ++ 
Sbjct: 243 RAYLDGKNSKVLNDKDFMVVG--FIEEG-KIYMVSFT--KEQLVVCDLDGRLVESPMKEY 297

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                    S     I ++        I  ++ DG+ + ++     +   +++     L 
Sbjct: 298 AEQMNGDSLSYGNGWIYYSPEDSG--EIHRIRTDGTGDSVIYSGDRVVNMSYA-DVNWLW 354

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLI 431
           F  +K G    + Y +  +G N   +
Sbjct: 355 FMTQKTGGL-LQTYLLYCDGSNLIQL 379


>gi|315231541|ref|YP_004071977.1| acylamino-acid-releasing enzyme [Thermococcus barophilus MP]
 gi|315184569|gb|ADT84754.1| acylamino-acid-releasing enzyme [Thermococcus barophilus MP]
          Length = 632

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 6/86 (6%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +  K +   D   S  G  IA+          K+   ++ +D S  R  +E++++  P +
Sbjct: 10  TFAKFSYLGDVRISKDGKQIAYVLTKANLKDNKYENTIVIEDKSGVRKFIENASM--PRF 67

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDL 423
           SPSG  + F R  +    S+L+ IDL
Sbjct: 68  SPSGTKMSFVRPNEEKKTSELWLIDL 93



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 47/118 (39%), Gaps = 16/118 (13%)

Query: 264 RFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           R S +GK+    + K     ++  +   ++ +S   + + N         +SP  +++ F
Sbjct: 21  RISKDGKQIAYVLTKANLKDNKYENTIVIEDKSGVRKFIENAS----MPRFSPSGTKMSF 76

Query: 319 E--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA---FTKFSGEKF 371
              ++ +   +L+++       K++ + K  +  +  WS     +    F +   E F
Sbjct: 77  VRPNEEKKTSELWLIDLRSMSAKKLMETK--NILNVSWSSDDRRLLITGFKRREDEDF 132



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 17/118 (14%)

Query: 308 SYSPDSSQIVFE------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             S D  QI +        D + +  + +   +G       +    +   P +SP G  +
Sbjct: 21  RISKDGKQIAYVLTKANLKDNKYENTIVIEDKSG------VRKFIENASMPRFSPSGTKM 74

Query: 362 AFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI---FSRKKDGDT 414
           +F + + EK    + ++       + L+E  N+   +WS   R L+   F R++D D 
Sbjct: 75  SFVRPNEEKKTSELWLIDLRSMSAKKLMETKNILNVSWSSDDRRLLITGFKRREDEDF 132



 Score = 40.0 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 79/224 (35%), Gaps = 50/224 (22%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-YDDE 234
           +I +V         K    ++  D + +R    +       PRFSP+  K+++    +++
Sbjct: 28  QIAYVLTKANLKDNKYENTIVIEDKSGVRKFIENAS----MPRFSPSGTKMSFVRPNEEK 83

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
               ++L+D R   A K +     + ++  +SS+ +R LI+  K    +           
Sbjct: 84  KTSELWLIDLRSMSAKKLMETKNILNVS--WSSDDRRLLITGFKRREDE----------- 130

Query: 295 ERLTNTLFINISASYSP-----DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
               + +F +    +       D  +  F          ++  + G +   + +     +
Sbjct: 131 ----DFIFEDDVPVWFDNKGFFDGEKTTF----------WIYDTEGEEI--LDEFTADKF 174

Query: 350 FDPVWSPQGDLIAFT--KFSGEK------FAIGVMKKDGSQERL 385
              +W   G+ I +        K      + I   K DG  E++
Sbjct: 175 SSGIW--HGEEIIYNVPHREDNKPQFFKFYDIYRYK-DGESEKI 215


>gi|168034550|ref|XP_001769775.1| TFIID and SAGA complex subunit [Physcomitrella patens subsp.
           patens]
 gi|162678884|gb|EDQ65337.1| TFIID and SAGA complex subunit [Physcomitrella patens subsp.
           patens]
          Length = 673

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/226 (12%), Positives = 71/226 (31%), Gaps = 17/226 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           L       ++   FSP+ + +  ++ D    +R++ M  + +    +  NF   +   ++
Sbjct: 412 LLQGHAGPVYAASFSPDSEFLLTSSADC--TVRLWSMRLKTNLMGYKGHNFP--VWDVQY 467

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S  G     +   D    I+ ++        L   +       +  + + +         
Sbjct: 468 SPVGHYFA-TASHDRTARIWCMERM-QPLRILVGHMSDVDCLQWHVNCNYVA---TGGTD 522

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--E 383
             + +      +  R+      +      S  G  +A      ++ AI +      Q   
Sbjct: 523 NTVRLWDVQTGECLRVFNGHCGTVLSLAMSSDGRYMA---SGDDRGAIFMWDLGSGQCVA 579

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            L+   S +    +S  G  L        D   +L+ ++ + +   
Sbjct: 580 PLMGHTSCVWTLAFSGEGSLLA---SGSADNTVRLWDVNASSKGSR 622


>gi|109039659|ref|XP_001108167.1| PREDICTED: acylamino-acid-releasing enzyme [Macaca mulatta]
          Length = 732

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 31/222 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEP 217
           D+I +    ++     + +F  +   + + K+   LCV+D +  NI  L    + +    
Sbjct: 189 DEIARLKKPDQPIKGDQFVFYEDWGENMVSKSIPVLCVLDVESGNISVLEGVPENVSPGQ 248

Query: 218 R-FSPNQQKVAYATYDDEDIL----------RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             ++P    V +  +  E                     I    + + +    + +PR S
Sbjct: 249 AFWAPGDAGVVFVGWWHEPFRLGIRFCTNRRSALYYVDLIGGKCELLSDDSLAVSSPRLS 308

Query: 267 SNGKRALI----SVQKDEA-MDIYSVDLQSNA--------TERLT-NTLFINIS----AS 308
            +  R +     S+        +   D  +            +L  N   I  S      
Sbjct: 309 PDQCRIVYLQYPSLIPHHQCSQLCLYDWYTKVTSVVVDIVPRQLGENFSGIYCSLLPLGC 368

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +S DS ++VF+S +  ++ L+ + +       ++       +
Sbjct: 369 WSADSQRVVFDSAQRSRQDLFAVDTQVGTVTSLTAGGSGGSW 410


>gi|53725504|ref|YP_103520.1| hypothetical protein BMA1926 [Burkholderia mallei ATCC 23344]
 gi|124385189|ref|YP_001026827.1| hypothetical protein BMA10229_A0837 [Burkholderia mallei NCTC
           10229]
 gi|238560948|ref|ZP_00442537.2| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
 gi|251767026|ref|ZP_02265723.2| conserved hypothetical protein [Burkholderia mallei PRL-20]
 gi|254202204|ref|ZP_04908567.1| conserved hypothetical protein [Burkholderia mallei FMH]
 gi|254207535|ref|ZP_04913885.1| conserved hypothetical protein [Burkholderia mallei JHU]
 gi|254359948|ref|ZP_04976218.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
 gi|52428927|gb|AAU49520.1| conserved hypothetical protein [Burkholderia mallei ATCC 23344]
 gi|124293209|gb|ABN02478.1| conserved hypothetical protein [Burkholderia mallei NCTC 10229]
 gi|147746451|gb|EDK53528.1| conserved hypothetical protein [Burkholderia mallei FMH]
 gi|147751429|gb|EDK58496.1| conserved hypothetical protein [Burkholderia mallei JHU]
 gi|148029188|gb|EDK87093.1| conserved hypothetical protein [Burkholderia mallei 2002721280]
 gi|238525229|gb|EEP88657.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
 gi|243064018|gb|EES46204.1| conserved hypothetical protein [Burkholderia mallei PRL-20]
          Length = 411

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D + V +R +D    +        +   S+ 
Sbjct: 33  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYV-YR-FDTDSGQVSPVSSAKAENPSYL 90

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 91  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 148

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 149 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 208

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 209 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 242

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    I  +       
Sbjct: 243 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLAHIETVPMTAPGF 302

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 303 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 347


>gi|556514|dbj|BAA07476.1| acylamino acid-releasing enzyme [Homo sapiens]
          Length = 732

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 31/222 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEP 217
           D+I +    ++     + +F  +   + + K+   LCV+D +  NI  L    + +    
Sbjct: 189 DEIARLKKPDQPIKGDQFVFYEDWGENMVSKSIPVLCVLDVESGNISVLEGVPENVSPGQ 248

Query: 218 R-FSPNQQKVAYATYDDEDIL----------RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             ++P    V +  +  E                     I    + + +    + +PR S
Sbjct: 249 AFWAPGDAGVVFVGWWHEPFRLGIRFCTNRRSALYYVDLIGGKCELLSDDSLAVSSPRLS 308

Query: 267 SNGKRALI----SVQKDEA-MDIYSVDLQSNA--------TERLT-NTLFINIS----AS 308
            +  R +     S+        +   D  +            +L  N   I  S      
Sbjct: 309 PDQCRIVYLQYPSLIPHHQCSQLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGC 368

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +S DS ++VF+S +  ++ L+ + +       ++       +
Sbjct: 369 WSADSQRVVFDSAQRSRQDLFAVDTQVGTVTSLTAGGSGGSW 410


>gi|237730741|ref|ZP_04561222.1| 6-phosphogluconolactonase [Citrobacter sp. 30_2]
 gi|226906280|gb|EEH92198.1| 6-phosphogluconolactonase [Citrobacter sp. 30_2]
          Length = 346

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 72/235 (30%), Gaps = 18/235 (7%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 17  KQTVYTASPESQQIHVWSLNHDGSLTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 76

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPD-SSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
            Y +     A         +  S +  S D   + VF  S   G   + V +        
Sbjct: 77  AYRIAPDDGALT-FAAESALPGSPTHISTDHQGRFVFVGSYNAGS--VSVTRLEDGLPVE 133

Query: 341 ISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNL 392
           +    E          SP    +       ++  +  +  DG        E   VE +  
Sbjct: 134 LVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFDVSDDGHLVAQEPAEVTTVEGAGP 193

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
           +   + P+ +   +   +   +       D  G+ E   TL   PA  +D +W  
Sbjct: 194 RHMAFHPN-KQYAYCVNELNSSVDVWELKDPYGKIECVQTLDMMPADFADTRWAA 247


>gi|190896134|gb|ACE96580.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896136|gb|ACE96581.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896138|gb|ACE96582.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896140|gb|ACE96583.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896142|gb|ACE96584.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896146|gb|ACE96586.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896154|gb|ACE96590.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896162|gb|ACE96594.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896168|gb|ACE96597.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896170|gb|ACE96598.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896172|gb|ACE96599.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896174|gb|ACE96600.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896176|gb|ACE96601.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896178|gb|ACE96602.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896180|gb|ACE96603.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896184|gb|ACE96605.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896186|gb|ACE96606.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896188|gb|ACE96607.1| U5 snRNP-specific protein-like factor [Populus tremula]
 gi|190896190|gb|ACE96608.1| U5 snRNP-specific protein-like factor [Populus tremula]
          Length = 215

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 71/227 (31%), Gaps = 23/227 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +       + +  ++ +  ++  A+ D      V   D    +  K++    S + + 
Sbjct: 4   FMVMRGHKNAVLDLHWTADGSQIISASPDK----TVRAWDVETGKQIKKMAEHSSFVNSC 59

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S  G   ++S   D    ++  DL+     +     +   + S+S D+S  +F    +
Sbjct: 60  CPSRRGPPLVVSGSDDGTSKLW--DLRQKGAIQTFPDKYQITAVSFS-DASDKIFTGGID 116

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + V      +     +  +        SP G  +  T     K  I  M+    Q 
Sbjct: 117 --NDVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLL-TNGMDNKLCIWDMRPYAPQN 173

Query: 384 R--LLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           R   + E             +WSP G  +       G     +Y  D
Sbjct: 174 RCVKIFEGHQHNFEKNLLKCSWSPDGSKV-----TAGSADRMVYIWD 215


>gi|126335502|ref|XP_001363555.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 326

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/265 (13%), Positives = 90/265 (33%), Gaps = 29/265 (10%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S    +G     +  ++ +  N         + +    F  + + +   T  ++ + R++
Sbjct: 55  SMIAAAGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWM--YTGGEDSMARIW 112

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            + +R  +  +RI    + I       N    ++    D++  I+  DL+++  E+L   
Sbjct: 113 DLRSRNLQC-QRIFQVNAPINCVCLHPNQAELIV---GDQSGAIHIWDLKTDHNEQLIPE 168

Query: 301 LFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--------DKEASYFD 351
             +++ S    PD+S +   +        YV    G   + ++Q                
Sbjct: 169 PEVSVNSVHIDPDASYMAAVNS---TGNCYVWNLTGGIGEEVTQLIPKTKIPAHTRYALQ 225

Query: 352 PVWSPQGDLIAFTK-------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             +SP   L+A          +    F++       S          +    +S   + +
Sbjct: 226 CRFSPDSTLLATCSADQTCKIWRTSNFSLMTELSIKSNNPGETSRGWMWDCAFSGDSQYI 285

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNET 429
           + +     D  ++L+ +D  G  + 
Sbjct: 286 VTASS---DNLARLWCVD-TGEIKR 306


>gi|322807089|emb|CBZ04663.1| basic protein [Clostridium botulinum H04402 065]
          Length = 429

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 81/221 (36%), Gaps = 28/221 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  +  Y   D      +  ++       K   +F S I       NG+       +   
Sbjct: 111 SGNEKIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNIW-----INGQWLYYINYRGGN 165

Query: 282 MD--IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQLYVMQSN 334
            +  +Y +    N+ ERLT+T  I+ S  +S +    +F      S  +   ++Y ++ +
Sbjct: 166 EENCLYRIKKDGNSRERLTDTT-ID-SLVFSDN---YIFYSEYISSSSKDNYKIYRIKKD 220

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           GS +  +S  +  +         G  + +       ++I  ++ DG   + +   S+   
Sbjct: 221 GSSKIALSNVRGINLIIQ-----GPFLYYLNIED-NYSIYRIRVDGLDMKKINNYSSRNF 274

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                 G  + +    + + G+ LY   L+G  E  +N  +
Sbjct: 275 MRI-KDG-WIYYI---NEELGNNLYRTTLDGNYEEKLNNDS 310



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 78/190 (41%), Gaps = 31/190 (16%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--L 328
           +    +  +   +I  ++L  +   +L +    NI   +  +   + + + R G E+  L
Sbjct: 115 KIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNI---WI-NGQWLYYINYRGGNEENCL 170

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQER 384
           Y ++ +G+ ++R++   + +    V+S     I ++      S + + I  +KKDGS + 
Sbjct: 171 YRIKKDGNSRERLT---DTTIDSLVFSDN--YIFYSEYISSSSKDNYKIYRIKKDGSSKI 225

Query: 385 LLVEDSNLQAPTWSPSGRSLI---FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            L     +           +I   F    + +    +Y I ++G +   IN  +  +  +
Sbjct: 226 ALSNVRGIN---------LIIQGPFLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMR 276

Query: 442 ----WVGFMD 447
               W+ +++
Sbjct: 277 IKDGWIYYIN 286


>gi|321258321|ref|XP_003193887.1| hypothetical protein CGB_D8590W [Cryptococcus gattii WM276]
 gi|317460357|gb|ADV22100.1| hypothetical protein CNJ00970 [Cryptococcus gattii WM276]
          Length = 965

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/216 (12%), Positives = 70/216 (32%), Gaps = 24/216 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           ++T S    +         ++VA  + D      + +++ +       + +    + +  
Sbjct: 94  FVTRSSGVPIRWLSLDKAGERVAVCSDDM----VIKIVNLKDTTKVSLVSDNNKPVRSAT 149

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL------TNTLFINIS--ASYSPDSSQI 316
           +   GK    +   D  + +Y     +    ++       +    + S  A + P  +  
Sbjct: 150 WDPTGKYLT-TASCDGKLKVYDTSGSTPYCVKVFEGVIAASDSDSDTSCYAQWHPSGN-- 206

Query: 317 VFESDREGKEQLYVMQSNG-SDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            F +       + +   +G   Q   + D   A   +  WSP G  +A    +     + 
Sbjct: 207 -FFAVPTRTNDIAIFGRDGWGRQSSYTPDGPKALIGELAWSPNGKYLAVAAAT----NLY 261

Query: 375 VMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSR 408
           +   +  Q        D  +   ++SP+   L F+ 
Sbjct: 262 IFSSETRQPIGSYTCPDGAISGLSFSPNANLLGFTS 297



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 57/179 (31%), Gaps = 21/179 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-- 262
            L    ++ +    + P  + +  A+ D +  L+VY          K    F  +I A  
Sbjct: 136 SLVSDNNKPVRSATWDPTGKYLTTASCDGK--LKVYDTSGSTPYCVKV---FEGVIAASD 190

Query: 263 --------PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDS 313
                    ++  +G    +  + ++   I+  D     +    +    +    ++SP+ 
Sbjct: 191 SDSDTSCYAQWHPSGNFFAVPTRTNDIA-IFGRDGWGRQSSYTPDGPKALIGELAWSPNG 249

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +   +       LY+  S            + +     +SP  +L+ FT   G    
Sbjct: 250 KYLAVAA----ATNLYIFSSETRQPIGSYTCPDGAISGLSFSPNANLLGFTSLDGSFHR 304



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 59/175 (33%), Gaps = 35/175 (20%)

Query: 269 GKRALISVQKDEAMDIYSVDL-QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           G+R  +     + M I  V+L  +     +++      SA++ P    +   S  +GK  
Sbjct: 112 GERVAVCS---DDMVIKIVNLKDTTKVSLVSDNNKPVRSATWDPTGKYLTTASC-DGK-- 165

Query: 328 LYVMQSNGSDQKRI---------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           L V  ++GS    +         S     +     W P G+  A    + +   I +  +
Sbjct: 166 LKVYDTSGSTPYCVKVFEGVIAASDSDSDTSCYAQWHPSGNFFAVPTRTND---IAIFGR 222

Query: 379 DGSQERLLVEDSNLQAP-------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           DG   +          P        WSP+G+ L  +        + LY      R
Sbjct: 223 DGWGRQ---SSYTPDGPKALIGELAWSPNGKYLAVAA------ATNLYIFSSETR 268


>gi|170033808|ref|XP_001844768.1| WS beta-transducin repeats protein [Culex quinquefasciatus]
 gi|167874845|gb|EDS38228.1| WS beta-transducin repeats protein [Culex quinquefasciatus]
          Length = 371

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 52/159 (32%), Gaps = 24/159 (15%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           LF    S    ++ +     E         +  DR   RI       +  R+S +G+  +
Sbjct: 30  LFHISVSHASDRIIFLWSTKE-------FASTKDRRSFRINVDYDHAVRVRWSPDGRALV 82

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----------YSPDSSQIVFESDRE 323
                   +++Y VD      +  T                     +PD   ++  S+R 
Sbjct: 83  AYKYNGGCIEVYKVDKVDGWFQNPTKGS---TFPRAHMDDIIGFGIAPDGKYLMSCSNRT 139

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              +L V    G+  +++     ++Y     SP G  IA
Sbjct: 140 ---ELTVWDVRGNVLEKVDTFLISTYSAK-ISPCGKFIA 174


>gi|145547320|ref|XP_001459342.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427166|emb|CAK91945.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2263

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 67/193 (34%), Gaps = 27/193 (13%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            +P   K  Y T   +  +RV+ +D +      +   F S I A  +SS+GK     +  D
Sbjct: 1267 APTGHK--YVTGGGDKTVRVWDIDQKKMVCVSKP--FPSEIRAVDWSSDGK---FIICGD 1319

Query: 280  EAMDIYSVDLQS-----NATERLTN------TLFINISASYSPDSSQIVFESDREGKEQL 328
                +Y +D  +      A    T       T +I+     SPD  ++ F +   G   L
Sbjct: 1320 LNGFLYLLDPNTLQIMDTAKTIFTTMPKRQSTYWIDD-LKISPDCKRVAFGAH-GGASHL 1377

Query: 329  YVMQSN----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             V        G    +I     ++     WS    ++         + +  +  +  + +
Sbjct: 1378 EVWTIEYPKFGKQGTKIQCGLTSALTALDWSVDSSIVIVNS---GAYELKYVDVNAKKNQ 1434

Query: 385  LLVEDSNLQAPTW 397
                 +N +  +W
Sbjct: 1435 PSSSQANTEFASW 1447


>gi|326483322|gb|EGE07332.1| chromosome segregation protein [Trichophyton equinum CBS 127.97]
          Length = 824

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 63/172 (36%), Gaps = 23/172 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S +++ VA A+    D L V +++       K + +    +    F  +G+   +S  
Sbjct: 104 AISKDEEWVAVAS----DELTVKIVNINDITEVKYLRDQTKGVKHVTFDPSGRFVTVS-C 158

Query: 278 KDEAMDIYS--------VDLQSNATERLTNTLFINISASYSPDSSQIVFE---------S 320
            D  + IYS        +        +L        SA + PD +              S
Sbjct: 159 ADGIIYIYSFTETEPRLLHKLDGVIRQLETDNEATSSAVWHPDGTAFAAVETTRDITVIS 218

Query: 321 DREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            R+  K+Q +    NG D K I      +  +  W P  +++AFT   GE F
Sbjct: 219 SRDWTKQQKFSGGHNGDDSKVIKTYDIPNVINFRWHPTQNVVAFTTSDGELF 270


>gi|313496740|gb|ADR58106.1| Peptidase S9 prolyl oligopeptidase [Pseudomonas putida BIRD-1]
          Length = 607

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 55/140 (39%), Gaps = 14/140 (10%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
             S+ P    +VF ++++  +Q+Y    +    + ++QD    Y D  W   G ++A  +
Sbjct: 76  GGSFCPGGDGLVFVNEKD--QQVYTQPLDDLLPRALTQDASCRYGDVQWH-DGHVLAVEE 132

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              E     ++    S   +L E ++   +PT S  G+ L +      D  ++ +++   
Sbjct: 133 RHAEHVEHRLVALGDSSREVLAEGADFYASPTVSADGQRLAWIEW---DRPAQPWTV--- 186

Query: 425 GRNETLINTPAYASDPQWVG 444
               T +      +   W  
Sbjct: 187 ----TRLMCSVRDASGHWGP 202


>gi|330919561|ref|XP_003298668.1| hypothetical protein PTT_09442 [Pyrenophora teres f. teres 0-1]
 gi|311328043|gb|EFQ93247.1| hypothetical protein PTT_09442 [Pyrenophora teres f. teres 0-1]
          Length = 551

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 44/318 (13%), Positives = 94/318 (29%), Gaps = 40/318 (12%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS-------LCVMD 197
            +S    R+    I D +           + R+L    +  S             L V D
Sbjct: 214 KASTNHRRRHNTVIKDALIGGYESVPFTSDGRLLLYHANNGSTQRGKRKPEELPLLVVYD 273

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNF 256
            D     +       ++     SP+ +  A  ++D    +  V+  +         + ++
Sbjct: 274 LDAGVQLHRLMGHTNVISWSAISPDNKYAASVSWDGSLRMYSVFTGELVWATEKTNLISW 333

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSS 314
                   FS + K  + S Q+   + ++  D  +          F +      + P   
Sbjct: 334 AG-----AFSPDSKYIVWSTQRGRVVQVH--DATNGRQMSKMQEQFSDWCRCLKWHPARC 386

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRI----------SQDKEASYFDPVWSPQGDLIAFT 364
           +I    +    + +YV         +I          +    A      W   G+L+   
Sbjct: 387 EIALCVE----KNVYVWDPFDGLSGKILQHLKLDDDNTWRHLAGIRAVGWMKDGNLLYVE 442

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              G K    V    G+ + L    + ++       G   +F     G+     + + ++
Sbjct: 443 SMEGTKL---VYDLQGNAKELFKRATGMEVGHV-KGGFYGVFQDDMHGE-----FYLSID 493

Query: 425 GRNETLINTPAYASDPQW 442
           G  +      + A+ P W
Sbjct: 494 GDRKVRYWRTSIAASPSW 511


>gi|298229007|ref|NP_001177196.1| autophagy-related protein 16-1 isoform 5 [Homo sapiens]
          Length = 491

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 215 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 263

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 264 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 305

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 306 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 357

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 358 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 411

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 412 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 469

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 470 SPSGSHVV 477


>gi|219518051|gb|AAI43901.1| ATG16L1 protein [Homo sapiens]
          Length = 561

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 285 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 333

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 334 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 375

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 376 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 427

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 428 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 481

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 482 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 539

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 540 SPSGSHVV 547


>gi|211829997|gb|AAI17338.2| ATG16L1 protein [Homo sapiens]
          Length = 580

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 304 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 352

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 353 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 394

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 395 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 446

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 447 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 500

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 501 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 558

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 559 SPSGSHVV 566


>gi|124256478|ref|NP_060444.3| autophagy-related protein 16-1 isoform 2 [Homo sapiens]
 gi|119591440|gb|EAW71034.1| ATG16 autophagy related 16-like 1 (S. cerevisiae), isoform CRA_b
           [Homo sapiens]
 gi|119591446|gb|EAW71040.1| ATG16 autophagy related 16-like 1 (S. cerevisiae), isoform CRA_b
           [Homo sapiens]
 gi|125656328|gb|ABN48554.1| ATG16 autophagy related 16-like protein 1 [Homo sapiens]
          Length = 588

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 312 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 360

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 361 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 402

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 403 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 454

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 455 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 508

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 509 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 566

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 567 SPSGSHVV 574


>gi|124256480|ref|NP_110430.5| autophagy-related protein 16-1 isoform 1 [Homo sapiens]
 gi|62510482|sp|Q676U5|A16L1_HUMAN RecName: Full=Autophagy-related protein 16-1; AltName:
           Full=APG16-like 1
 gi|119591439|gb|EAW71033.1| ATG16 autophagy related 16-like 1 (S. cerevisiae), isoform CRA_a
           [Homo sapiens]
 gi|307685429|dbj|BAJ20645.1| ATG16 autophagy related 16-like 1 [synthetic construct]
          Length = 607

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 331 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 379

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 380 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 421

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 422 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 473

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 474 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 527

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 528 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 585

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 586 SPSGSHVV 593


>gi|117928696|ref|YP_873247.1| peptidase S9 prolyl oligopeptidase [Acidothermus cellulolyticus
           11B]
 gi|117649159|gb|ABK53261.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Acidothermus cellulolyticus 11B]
          Length = 646

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/229 (13%), Positives = 65/229 (28%), Gaps = 60/229 (26%)

Query: 191 NSLCVMDRDGA-----NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
             +  +  DG+         +     +    P  SP+  ++A+  +D   +         
Sbjct: 148 RDIVAVPLDGSAADDPRRIRVVVGGSRFFAYPTVSPDGGRLAWVAWDHPQMPW------- 200

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                                 +G    I   +D  +D ++  +     E +       +
Sbjct: 201 ----------------------DGTELRIGALRDGIVDTWTT-VAGGPAESI-------L 230

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS---------P 356
             +++ D S + F SDR G   LY               ++     P+W           
Sbjct: 231 QPTWATDGS-LYFLSDRSGWWNLYRWD---GAAVHALAPRDEECGGPLWQLGMRWFAPLA 286

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            G  IA          +GV+  D  +   +    +    + +  G  ++
Sbjct: 287 DGR-IAVIH----GGHLGVLNPDSGEVVDVAIPLSYVDASVTADGSEVV 330


>gi|114583968|ref|XP_001150056.1| PREDICTED: autophagy-related protein 16-1 isoform 9 [Pan
           troglodytes]
          Length = 588

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 312 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 360

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 361 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 402

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 403 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 454

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 455 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 508

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 509 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 566

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 567 SPSGSHVV 574


>gi|114583966|ref|XP_001150112.1| PREDICTED: autophagy-related protein 16-1 isoform 10 [Pan
           troglodytes]
          Length = 607

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 331 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 379

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 380 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 421

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 422 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 473

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 474 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 527

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 528 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 585

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 586 SPSGSHVV 593


>gi|114583964|ref|XP_001149861.1| PREDICTED: APG16 autophagy 16-like isoform 7 [Pan troglodytes]
          Length = 584

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 308 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 356

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 357 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 398

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 399 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 450

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 451 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 504

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 505 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 562

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 563 SPSGSHVV 570


>gi|114583970|ref|XP_001149931.1| PREDICTED: APG16 autophagy 16-like isoform 8 [Pan troglodytes]
          Length = 523

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 247 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 295

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 296 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 337

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 338 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 389

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 390 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 443

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 444 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 501

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 502 SPSGSHVV 509


>gi|39843342|gb|AAR32130.1| APG16L beta [Homo sapiens]
          Length = 607

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 331 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 379

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 380 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 421

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 422 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 473

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 474 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 527

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 528 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 585

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 586 SPSGSHVV 593


>gi|48735323|gb|AAH71846.1| ATG16L1 protein [Homo sapiens]
          Length = 475

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 199 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 247

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 248 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 289

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 290 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 341

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 342 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 395

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 396 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 453

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 454 SPSGSHVV 461


>gi|298229005|ref|NP_001177195.1| autophagy-related protein 16-1 isoform 4 [Homo sapiens]
 gi|62822311|gb|AAY14860.1| unknown [Homo sapiens]
 gi|313883690|gb|ADR83331.1| Unknown protein [synthetic construct]
          Length = 523

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 247 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 295

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 296 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 337

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 338 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 389

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 390 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 443

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 444 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 501

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 502 SPSGSHVV 509


>gi|328768978|gb|EGF79023.1| hypothetical protein BATDEDRAFT_89996 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1448

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 70/198 (35%), Gaps = 21/198 (10%)

Query: 163 YQSITGEKGDFNSRILFVSESVVS------GIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            + I   +       LF  +   S        + + + + DR GA +  ++ + D    E
Sbjct: 22  MKRIFNIRSTGGGPTLFEWQRGSSQYLASVPTLASVVRITDRKGALVDSISLNSD--CLE 79

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            ++SP    +A         + + L D    +    +      +    +S +G+   I+ 
Sbjct: 80  IKWSPQGTCLA---ILQSKNMPLILWDASGTKNVTMVDTGMKNLETMAWSHDGEMMAIAS 136

Query: 277 QKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            K     ++ +D +S+    +   +   I  + ++SP        +D+       +    
Sbjct: 137 SKG---SLFLLDRKSDKRTPVVGKHNKAI-TAMAWSPTGELACASADKS----FSISNRE 188

Query: 335 GSDQKRISQDKEASYFDP 352
           G    ++    EA++F P
Sbjct: 189 GDTLFQMGLKGEANFFQP 206



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 51/165 (30%), Gaps = 29/165 (17%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA----- 347
             +R+ N        +        +FE  R G  Q        +   RI+  K A     
Sbjct: 21  QMKRIFNIRSTGGGPT--------LFEWQR-GSSQYLASVPTLASVVRITDRKGALVDSI 71

Query: 348 ----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSG 401
                  +  WSPQG  +A      +   + +    G++   +V+    NL+   WS  G
Sbjct: 72  SLNSDCLEIKWSPQGTCLAI--LQSKNMPLILWDASGTKNVTMVDTGMKNLETMAWSHDG 129

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINT--PAYASDPQWVG 444
             +  +  K       L+ +D      T +        +   W  
Sbjct: 130 EMMAIASSKG-----SLFLLDRKSDKRTPVVGKHNKAITAMAWSP 169


>gi|321472432|gb|EFX83402.1| hypothetical protein DAPPUDRAFT_100736 [Daphnia pulex]
          Length = 414

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 77/213 (36%), Gaps = 11/213 (5%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            D   IR +  S  +I+ +  +S +  ++  + Y  +  L V+ +     +   +I    
Sbjct: 36  SDFQPIRVIQCS--EIVEQIEWSTD-SELLLSAYIKKGKLEVWSVAQPEWKC--KISTGS 90

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQ 315
             ++A +F+ + +  L + +    + I+S+  Q+     L       I+    +    + 
Sbjct: 91  LGLIAAQFAPSSRHVLTTARLHLRITIWSLSDQNVCHINLPKAANPGID----FCVGGTH 146

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +     R   + + +   +   Q  +            WSP G  IA          +G+
Sbjct: 147 MAVVERRMALDCVAIYSCDTWTQVTLIDCAAVDIGGMKWSPDGSKIAIWDGISHSGKLGI 206

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
               GSQ   +     + +  WSPS + L  + 
Sbjct: 207 YLISGSQLAEITNLFGIHSIEWSPSAQILAVAT 239


>gi|318058446|ref|ZP_07977169.1| peptide hydrolase [Streptomyces sp. SA3_actG]
          Length = 609

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 59/165 (35%), Gaps = 14/165 (8%)

Query: 262 APRFS--------SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           APR S         +  R+L         ++Y+ D  + A  ++T+        + SPD 
Sbjct: 24  APRVSLPEWAEDAPD--RSLFVSNATGTYELYAWDRATGAQRQVTDRENGTTDGTLSPDG 81

Query: 314 SQIVFESDREGKE-QLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           + I +  D +G E  ++  Q  + G D + +     A          G  +     S E 
Sbjct: 82  AWIWWFDDHDGDEFGVWRRQPFAGGEDAEALPGVAAAYSAGLALGRDGRTVVVGSSSDEH 141

Query: 371 FAI-GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            ++  V++  G+   +     +      S  G  L+    + GD 
Sbjct: 142 GSLVHVVRDAGAPVEVYRHRESAGVGDLSYDGSLLVVEHTEHGDA 186



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 73/265 (27%), Gaps = 40/265 (15%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +    R   +  P ++ +    +    +      +Y  D R   A +++ +  +    
Sbjct: 16  PDWEKRFRAPRVSLPEWAEDAPDRSLFVSNATGTYELYAWD-RATGAQRQVTDRENGTTD 74

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS------ASYSP----- 311
              S +G         D          +     R       +        A+YS      
Sbjct: 75  GTLSPDGAWIWWFDDHDGD--------EFGVWRRQPFAGGEDAEALPGVAAAYSAGLALG 126

Query: 312 -DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D   +V  S  +    L  +  +      + + +E S      S  G L+         
Sbjct: 127 RDGRTVVVGSSSDEHGSLVHVVRDAGAPVEVYRHRE-SAGVGDLSYDGSLLVVEHTEHGD 185

Query: 371 ---FAIGVMKK-DGSQERLL------VEDSNLQ----APTWSP---SGRSLIFSRKKDGD 413
               A+ V++  +G +           E    +       ++P     R L+   +++G 
Sbjct: 186 AMHSALRVLELGEGGEVSRTVAELDDTEGGTKELGLSVMGFAPLAGDARLLV-GTQREGR 244

Query: 414 TGSKLYSIDLNGRNETLINTPAYAS 438
               ++           I+ P   S
Sbjct: 245 WLPMIWDPVAGTETALAIDLPGDVS 269


>gi|307189520|gb|EFN73897.1| WD repeat-containing protein 51B [Camponotus floridanus]
          Length = 450

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 46/283 (16%), Positives = 89/283 (31%), Gaps = 34/283 (12%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           +L      K ++      S  ++R IAH   D I        G+          +  S  
Sbjct: 32  QLVSSSLDKTLLVWNLTESVRAYRFIAHK--DGILDVCYAPSGEI--------IASASKD 81

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               + V    G ++ +   S      +  FSP+ +K+  A+ D      + L      R
Sbjct: 82  RSVRIWVPKVTGQSLDFKAHSSAVRSVQ--FSPDGEKLLTASDDK----SIKLWMVCQRR 135

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-----TLFI 303
                    + +   +FS +G R L+S   D+++ ++  D+ S    R  N       ++
Sbjct: 136 FLMSFNGHTNWVRCAKFSLDG-RLLVSCSDDKSIKVW--DIISGQCIRTFNEIKAPAAYV 192

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
               S     S  V          + +         +     + S     + P+G+ I  
Sbjct: 193 EFHPSSGAIGSANV-------GACIKLYDLKTGSLYQHYAAHKGSVNMIKFHPKGNFILT 245

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLI 405
                    + +   +G     L     N+ + T+S  G    
Sbjct: 246 ASSDSTMKVLDL--LEGRPIYTLKGHVGNVTSITFSQDGDFFA 286



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 36/260 (13%), Positives = 85/260 (32%), Gaps = 22/260 (8%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           T  D  ++       D  + + F   +   VS  +  +L V +   +   Y   +    +
Sbjct: 4   TACDPTFERHFKGHKDEVTALSFHPNATQLVSSSLDKTLLVWNLTESVRAYRFIAHKDGI 63

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            +  ++P+ + +A A+ D      V +   ++           S + + +FS +G++ L 
Sbjct: 64  LDVCYAPSGEIIASASKDR----SVRIWVPKVTGQSLDFKAHSSAVRSVQFSPDGEKLL- 118

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGKEQLYVM 331
           +   D+++ ++ V         L +          A +S D   +V  SD    + + V 
Sbjct: 119 TASDDKSIKLWMV----CQRRFLMSFNGHTNWVRCAKFSLDGRLLVSCSD---DKSIKVW 171

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVED 389
                   R   + +A      + P    I     +     I +                
Sbjct: 172 DIISGQCIRTFNEIKAPAAYVEFHPSSGAI---GSANVGACIKLYDLKTGSLYQHYAAHK 228

Query: 390 SNLQAPTWSPSGRSLIFSRK 409
            ++    + P G  ++ +  
Sbjct: 229 GSVNMIKFHPKGNFILTASS 248


>gi|300768861|ref|ZP_07078755.1| 6-phosphogluconolactonase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300493594|gb|EFK28768.1| 6-phosphogluconolactonase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 339

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/262 (14%), Positives = 85/262 (32%), Gaps = 31/262 (11%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           + AH + + +    T            +  S         +  +  DGA    LT +   
Sbjct: 73  QTAHKL-NTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA--LTLTDTVQH 129

Query: 213 ILFEPRFSPNQQKVAYATYDD----------EDILRVYLMDTRIDRAPKRIGNFRSMILA 262
               PR   +   + Y                D + VY +      + + +    +    
Sbjct: 130 SGHGPRPEQDGSHIHYTDLTPDNCLAVIDLGSDKVYVYNVSDAGQLSEQSLLTMEAG-FG 188

Query: 263 PR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERL-------TNTLFINISASY--S 310
           PR   FS +G+ A ++ +    +     D Q+ A  +L        +    N +A+   S
Sbjct: 189 PRHLVFSPDGQYAFLAGELSSQIASLKYDAQTGAFTQLGIVKTIPADYTAHNGAAAIRLS 248

Query: 311 PDSSQIVFESDREGKE-QLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            D    ++ S+R      ++ + ++G  +  ++IS + +    D    P    +     +
Sbjct: 249 HDG-HFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGD-FPRDFDLDPTEAFVVVVNQN 306

Query: 368 GEKFAIGVMKKDGSQERLLVED 389
            +   +        +  LL +D
Sbjct: 307 TDNATLYARDLTSGKLSLLQKD 328


>gi|195153535|ref|XP_002017681.1| GL17309 [Drosophila persimilis]
 gi|194113477|gb|EDW35520.1| GL17309 [Drosophila persimilis]
          Length = 991

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 46/110 (41%), Gaps = 6/110 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T++ N +  +SPD + ++      G  ++ V     +  + +S +   +Y +   SP G 
Sbjct: 56  TIYRNGNLVFSPDGNSVI---SPVGN-RITVHDLKNNKSRTLSLESRYNYTNIALSPDGS 111

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           L+      G+   I ++       R   +   +Q   +SP G+    +R+
Sbjct: 112 LLIAVNEQGDAQLISMVSC-TVIHRHKFQTG-VQCICFSPDGKYFAVARE 159



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 74/248 (29%), Gaps = 26/248 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +                +    +S + Q +A    D +    V L +T+      
Sbjct: 417 QLLVWEWQSEQYIMKQQGHSSEMTCIAYSSDGQYIATGGEDSK----VKLWNTQSSFCFV 472

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-------FIN 304
                 S +   +FS N K+ L+S   D  +  + V ++       T+          ++
Sbjct: 473 TFSEHTSGVTGIQFSRN-KKFLVSSSLDGTVRAFDV-IRYRNFRTFTSPNPAQFSCVAVD 530

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S        Q +F         +++          I    E       +SP        
Sbjct: 531 YSGELVVAGGQDIF--------DIFLWSVKTGKLLEIISGHEGPVVSLAFSPVATSSTLV 582

Query: 365 KFS-GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL----Y 419
             S  +   I    +  S+   +   S++   T+SPSG  +  +      T   +     
Sbjct: 583 SGSWDKTIKIWNCLESNSEHETIDAVSDVTNVTFSPSGEEIAVATLSGNITIFDIKSASQ 642

Query: 420 SIDLNGRN 427
              + GRN
Sbjct: 643 VTSIEGRN 650


>gi|183230496|ref|XP_001913447.1| WD domain containing protein [Entamoeba histolytica HM-1:IMSS]
 gi|169802872|gb|EDS89772.1| WD domain containing protein [Entamoeba histolytica HM-1:IMSS]
          Length = 204

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 50/158 (31%), Gaps = 15/158 (9%)

Query: 269 GKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           G   L+S   D  + ++ + LQS     RL       +S  +SPDS  I         + 
Sbjct: 57  GGERLVSASDDGTLYMW-MPLQSQKPVHRLVGHSSQVMSCKFSPDSRIIASTGC---DKN 112

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +            +    + +   WSP   ++             V+       +L+ 
Sbjct: 113 MRIWDGFTGSCLHTYRGHVQTIYGCAWSPDSRMLVSASKDSTVKLWNVVP---GCRKLMT 169

Query: 388 E--DSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSI 421
                  +  +  WS  G S+  +     D   K++  
Sbjct: 170 NLPGHLDEVFSIDWSLDGSSVATASY---DHTIKIWRY 204



 Score = 36.9 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 44/141 (31%), Gaps = 7/141 (4%)

Query: 182 ESVVSGIIKNSLCV-MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VS     +L + M        +        +   +FSP+ + +A    D      + 
Sbjct: 59  ERLVSASDDGTLYMWMPLQSQKPVHRLVGHSSQVMSCKFSPDSRIIASTGCDK----NMR 114

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATERLTN 299
           + D                I    +S + +  + S  KD  + ++  V         L  
Sbjct: 115 IWDGFTGSCLHTYRGHVQTIYGCAWSPDSRMLV-SASKDSTVKLWNVVPGCRKLMTNLPG 173

Query: 300 TLFINISASYSPDSSQIVFES 320
            L    S  +S D S +   S
Sbjct: 174 HLDEVFSIDWSLDGSSVATAS 194


>gi|168699074|ref|ZP_02731351.1| peptidase C14, caspase catalytic subunit p20 [Gemmata obscuriglobus
           UQM 2246]
          Length = 675

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 54/335 (16%), Positives = 97/335 (28%), Gaps = 71/335 (21%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G V   G   L      WD  D +++   +  +            + D  + I  +    
Sbjct: 361 GTVYARGGGWLSA----WDAGDGRRLFRVEIGADTGGRSFGTLFAAADAVRGIRAD---- 412

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                       +G       V+  D    R LT  R  +      SP+  ++       
Sbjct: 413 -----------GNGREDKRYSVVSFDPRTGRELT--RAPVAGGVAVSPDGSRIVRWDAGA 459

Query: 234 -------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                     +   L D   ++    +G  R + L+ +FS+NG+  ++    D      +
Sbjct: 460 AVIEPTAPRPISYTLFDVASNKEIAVLG--RGLRLSVQFSANGRTVVLV---DHGASFRA 514

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            D  +                 +            R G E    M    +  + +++D  
Sbjct: 515 FDAATGKQT-----------GEF------------RFGGENGRQM----TTIRALTEDTR 547

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRS 403
            +    V +P G  + F    GEK  + V        R L +        +   SP G  
Sbjct: 548 LT----VPTPDGRALVFWGLDGEKAVLKVWDIGAKTARTLGDGDGPYAEDSIAISPDGSR 603

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +   R+  G T     +    GR    I  P  + 
Sbjct: 604 VATFRRHVGWTVRDTATAKEVGR----IPQPGTSQ 634



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 55/202 (27%), Gaps = 23/202 (11%)

Query: 126 VEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV 185
           + + L+DV   K+I            R      ++     +      F  R    +    
Sbjct: 470 ISYTLFDVASNKEIAVLG-----RGLRLSVQFSANGRTVVLVDHGASF--RAFDAATGKQ 522

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSR----DQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +G  +         G N R +T  R    D  L  P   P+ + + +   D E  +    
Sbjct: 523 TGEFR-------FGGENGRQMTTIRALTEDTRLTVPT--PDGRALVFWGLDGEKAVLKVW 573

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                       G+      +   S +G R     +          D  +          
Sbjct: 574 DIGAKTARTLGDGDGPYAEDSIAISPDGSRVATFRRHVGWT---VRDTATAKEVGRIPQP 630

Query: 302 FINISASYSPDSSQIVFESDRE 323
             +  A+ S D   +    DR+
Sbjct: 631 GTSQRAALSADGRTLYAIRDRD 652


>gi|125811039|ref|XP_001361730.1| GA11557 [Drosophila pseudoobscura pseudoobscura]
 gi|54636906|gb|EAL26309.1| GA11557 [Drosophila pseudoobscura pseudoobscura]
          Length = 948

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 46/110 (41%), Gaps = 6/110 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T++ N +  +SPD + ++      G  ++ V     +  + +S +   +Y +   SP G 
Sbjct: 13  TIYRNGNLVFSPDGNSVI---SPVGN-RITVHDLKNNKSRTLSLESRYNYTNIALSPDGS 68

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           L+      G+   I ++       R   +   +Q   +SP G+    +R+
Sbjct: 69  LLIAVNEQGDAQLISMVSC-TVIHRHKFQTG-VQCICFSPDGKYFAVARE 116



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 74/248 (29%), Gaps = 26/248 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +                +    +S + Q +A    D +    V L +T+      
Sbjct: 374 QLLVWEWQSEQYIMKQQGHSSEMTCIAYSSDGQYIATGGEDSK----VKLWNTQSSFCFV 429

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-------FIN 304
                 S +   +FS N K+ L+S   D  +  + V ++       T+          ++
Sbjct: 430 TFSEHTSGVTGIQFSRN-KKFLVSSSLDGTVRAFDV-IRYRNFRTFTSPNPAQFSCVAVD 487

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S        Q +F         +++          I    E       +SP        
Sbjct: 488 YSGELVVAGGQDIF--------DIFLWSVKTGKLLEIISGHEGPVVSLAFSPVATSSTLV 539

Query: 365 KFS-GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL----Y 419
             S  +   I    +  S+   +   S++   T+SPSG  +  +      T   +     
Sbjct: 540 SGSWDKTIKIWNCLESNSEHETIDAVSDVTNVTFSPSGEEIAVATLSGNITIFDIKSASQ 599

Query: 420 SIDLNGRN 427
              + GRN
Sbjct: 600 VTSIEGRN 607


>gi|307309009|ref|ZP_07588689.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium
           meliloti BL225C]
 gi|306900482|gb|EFN31096.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium
           meliloti BL225C]
          Length = 629

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 62/155 (40%), Gaps = 10/155 (6%)

Query: 48  VSIAFTKFVSIDELGGKVSE-----VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           V++        DE  G++++     +++ DL R   F +I+++S +        +     
Sbjct: 219 VAVLPFDNYGGDEASGRLADGLTEDIIT-DLARFPEFKVIARNSTETYKGKAIDVREIG- 276

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI 162
             +L    +V G + +E  DR+RV  +L D K  + +  +++         I   I++ I
Sbjct: 277 -KALDVGFVVEGSIAREA-DRIRVTAQLIDSKQGRHLWSQRWDRPDKEVFVIQAEIAEQI 334

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIK-NSLCVM 196
              + G  G         +   V G +    L ++
Sbjct: 335 ANRLGGGAGLVQESGRIAAHRKVPGNLNAYELYLL 369


>gi|300772896|ref|ZP_07082765.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300759067|gb|EFK55894.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 809

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 54/165 (32%), Gaps = 36/165 (21%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISA-SYSPDSSQIVFES 320
            FS + K    +    + ++++ +DL +   ++LT+        S  S+  DS  ++   
Sbjct: 130 SFSPDRKTLAFTNTTAKGVELWVIDLATAQAKKLTSDNLNANLGSPYSWYRDSKSLL--- 186

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + V+ +N      + + K+      V +  G        +     +    KD 
Sbjct: 187 -------VNVLPAN--RPALLDEKKDLPAGPTVSTSDGK----VSQNRTYQDLLKNPKDE 233

Query: 381 SQERLLVEDSNLQAP-----------------TWSPSGRSLIFSR 408
           +    L      +                   ++SP G+ ++ + 
Sbjct: 234 TNFETLASSELFKVDLNGAATKFKNAAIYTSTSFSPDGKYIMLTT 278


>gi|195035271|ref|XP_001989101.1| GH11537 [Drosophila grimshawi]
 gi|193905101|gb|EDW03968.1| GH11537 [Drosophila grimshawi]
          Length = 347

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 45/309 (14%), Positives = 94/309 (30%), Gaps = 29/309 (9%)

Query: 148 PASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA--NIRY 205
            A  R+ ++  +  I Q    E   F +      E ++S      L +    G   NI  
Sbjct: 35  EAGVRRTSNLEAP-IMQLEGHEGEIFTTEFHPEGEMLLSSGFDRQLYIWQVYGECENIMA 93

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           ++      + E  F+P+   +   + D      + + D    +  +R+    + + + + 
Sbjct: 94  MS-GHTGAVMEAHFTPDGSHIFTCSTDK----TLAIWDIVTGQRVRRLKGHTNFVNSVQG 148

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S  G++ L S   D  + I+  D +         + F   +  +   S QI+        
Sbjct: 149 SRRGQQLLCSGSDDRTIRIW--DARKKQAAHCLESPFQVTAVCFGDTSEQII---SGGID 203

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQE 383
            +L +            +    +      SP+GD +           + +      G + 
Sbjct: 204 NELKIWDIRKQQVLHHLRGHTDTITGLSLSPEGDFVLTNAMDNTLRVWDVRAYAP-GERC 262

Query: 384 RLLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE--TLINTPA 435
             + +              WSP    +       G     +Y  D+N R     L     
Sbjct: 263 VKVFQGHQHNFEKNLLRCAWSPGSDKI-----SSGSADRHVYIWDVNTRRILYKLPGHNG 317

Query: 436 YASDPQWVG 444
             +D  +  
Sbjct: 318 SVNDVDFSP 326


>gi|113475692|ref|YP_721753.1| peptidase S8/S53 subtilisin kexin sedolisin [Trichodesmium erythraeum
            IMS101]
 gi|110166740|gb|ABG51280.1| peptidase S8 and S53, subtilisin, kexin, sedolisin [Trichodesmium
            erythraeum IMS101]
          Length = 1372

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 81/230 (35%), Gaps = 27/230 (11%)

Query: 185  VSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQ---------QKVAYATYDDE 234
             +   +N +  M+ DG  N R     R        +S              + +      
Sbjct: 1140 RNKYKRNEIWFMNDDGTFNSRARLKRRGS-----SWSVGGVADFNADQATDILWRNKYGY 1194

Query: 235  DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD--IYSVDLQSN 292
            + +     +  ++   + +G   S  +A     N  +    + +D+  +  I+ ++    
Sbjct: 1195 NEIWFMNDEGALNHRARSLGPDSSWDVAGVGDFNADQVADILWRDQNENNMIWMMNDDGT 1254

Query: 293  -----ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
                   + L ++  +   A+++ D    +   D +G  Q+++M   G  Q  IS     
Sbjct: 1255 VNNSARPDSLNSSWDVVGVANFNADQVADILWRDEKGSSQIWLMNDQGKVQNSISLGSYD 1314

Query: 348  SYFDPVWSPQ--GDLIA---FTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            S ++    P   GD +A   +   +     I +M  DG++ +++   S  
Sbjct: 1315 SPWNVKGMPDLNGDGVADILWRNENNGANHIWLMNDDGTRNQIVDPGSLD 1364


>gi|156399668|ref|XP_001638623.1| predicted protein [Nematostella vectensis]
 gi|156225745|gb|EDO46560.1| predicted protein [Nematostella vectensis]
          Length = 302

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 52/151 (34%), Gaps = 11/151 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +A  ++  +    V L++  + +    +       ++  +S +G        
Sbjct: 110 TFSPDSKILATGSHSGK----VNLINLELGKKESSLDTRGKFTMSLAYSPDGHYIA-CGA 164

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  ++I+  DL +N     L        S ++SPDS  ++  SD      + +     +
Sbjct: 165 IDGIINIF--DLTTNKLLHTLEGHAMPIRSLTFSPDSQLLITASD---DGHIKMYDVQHA 219

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +         +      + P       +   
Sbjct: 220 NLAGTLSGHSSWVLSVAFCPDNTHFVSSSSD 250



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 32/254 (12%), Positives = 74/254 (29%), Gaps = 38/254 (14%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSR 176
                  L    R+WD+   KQ+                                 +   
Sbjct: 74  TLAASSSLDSHVRIWDLVSGKQLKTID-----------------------CDPVDTWTVT 110

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
               S+ + +G     + +++ +         +R +      +SP+   +A    D    
Sbjct: 111 FSPDSKILATGSHSGKVNLINLELGKKESSLDTRGKFTMSLAYSPDGHYIACGAIDG--- 167

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNA 293
             + + D   ++    +      I +  FS +  + LI+   D  + +Y V   +L    
Sbjct: 168 -IINIFDLTTNKLLHTLEGHAMPIRSLTFSPD-SQLLITASDDGHIKMYDVQHANLAGT- 224

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              L+      +S ++ PD++  V  S     + + V  +          +     +   
Sbjct: 225 ---LSGHSSWVLSVAFCPDNTHFVSSSS---DKTVKVWDAGTRRCTHTFYEHTDQVWGVK 278

Query: 354 WSPQGDLIAFTKFS 367
           ++  G  I      
Sbjct: 279 YNATGSRIVSVSDD 292


>gi|151347322|gb|ABS01292.1| similar to activated kinase C receptor [Trypanosoma carassii]
          Length = 318

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 49/303 (16%), Positives = 105/303 (34%), Gaps = 33/303 (10%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG------IIKNS 192
           ++     ++  SWR   +  S++    +   + + +S  +       +G          S
Sbjct: 31  VVSASRDNTLISWRANPNRHSEENDYGLPDRRLEGHSAFVSDVALSNNGDFAVSASWDRS 90

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L +        ++   S  + +    FSP+ +++   +   ++ LR++ +         R
Sbjct: 91  LRLWSLQNGQCQHKFLSHTKDVLSVAFSPDNRQI--VSGGRDNALRLWNVKGDCMHTFGR 148

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNAT-ERLTNTLFINISASYS 310
                  +   RFS + +  LI        ++  V DL+++     L        S + S
Sbjct: 149 DA-HTDWVSCVRFSPSLQTPLIVS--GGWDNLVKVWDLRTSKLVTNLAGHKNCVTSVTVS 205

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD S     SDR G  +L+ +   G     +S     +     +SP    +     +  +
Sbjct: 206 PDGSLCA-SSDRNGVARLWDLNQ-GEALWELSAGSPINQIC--FSPNRYWMC----AATE 257

Query: 371 FAIGVMKKDGSQERL----LVEDSNLQAP-----TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            AI +   +     +      +    +AP      WS  G +L        D   +++S+
Sbjct: 258 KAIRIFDLESKDVIVELVPETQQKEKKAPECVSVAWSADGTTLY---SGHTDNVIRVWSV 314

Query: 422 DLN 424
             N
Sbjct: 315 SEN 317


>gi|78707608|gb|ABB46583.1| Notchless, putative, expressed [Oryza sativa Japonica Group]
          Length = 441

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/173 (13%), Positives = 52/173 (30%), Gaps = 19/173 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + +    FSP+ + +A  + D      V   D             ++ +L   +S +
Sbjct: 113 GHTEAVLAVSFSPDGRCLASGSGDT----TVRFWDLSTQTPLFTCKGHKNWVLCIAWSPD 168

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP-----DSSQIVFESD 321
           G   + S  K   + ++  D ++       LT       + S+ P        + V  S 
Sbjct: 169 GNHLV-SGSKSGELILW--DPKTGKQLGTPLTGHRKWITAVSWEPVHLQSPCRRFVSTS- 224

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++G  +++                  S     W   G  + +T        + 
Sbjct: 225 KDGDARIW--DMTTRKCVIALTGHTNSVTCVKWGGDG--LIYTGSEDCSIKVW 273



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 34/260 (13%), Positives = 78/260 (30%), Gaps = 42/260 (16%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+   +       +    +      
Sbjct: 132 SGSGDTTVRFWDLSTQTPLFTCKGHKNWVLCIAWSPDGNHLV---SGSKSGELILWDPKT 188

Query: 246 IDRAPKRIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQ------SNA 293
             +    +   R  I A  +      S    R  +S  KD    I+ +  +      +  
Sbjct: 189 GKQLGTPLTGHRKWITAVSWEPVHLQSP--CRRFVSTSKDGDARIWDMTTRKCVIALTGH 246

Query: 294 TERLTNTLFINISASY--SPDSSQIVFESDREG-----KEQLYVMQSNGSDQKRISQDKE 346
           T  +T   +      Y  S D S  V+E+ +       +   + + S     + + +   
Sbjct: 247 TNSVTCVKWGGDGLIYTGSEDCSIKVWETSQGKLVKTLQGHGHWVNSLALSTEYVLRTGA 306

Query: 347 ASYFDPVWSPQGDL----IA-FTKFSGE----------KFAIGVMKKDGSQE---RLLVE 388
             +    +S   ++    +A + K  G            F + + +   S++   R+   
Sbjct: 307 YDHTGKTYSTAEEMKEAALARYKKMRGNAPERLVSGSDDFTMFLWEPTISKQPKARMTGH 366

Query: 389 DSNLQAPTWSPSGRSLIFSR 408
              +    +SP G+ L  + 
Sbjct: 367 QKLVNHVYFSPDGQWLASAS 386


>gi|225440260|ref|XP_002283996.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 451

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 36/113 (31%), Gaps = 5/113 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SP+   +   S       ++ +        R             WSP GD     KF 
Sbjct: 225 SWSPNGRYLASASYESSSFTIWDVAKGLGTPIR---RGLGGISILKWSPTGDYFLSAKFD 281

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           G  F +       S+         +   TW P G  ++ +  K    GS  ++
Sbjct: 282 GT-FYLWETNTWTSEPWS-STSGFVTGATWDPDGHMVLIAFSKSSTLGSVHFA 332



 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 64/186 (34%), Gaps = 20/186 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +L    D+ +    +SPN + +A A+Y+      ++ +   +    +R     S++   +
Sbjct: 212 FLQSQNDEQISALSWSPNGRYLASASYESSS-FTIWDVAKGLGTPIRRGLGGISIL---K 267

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ--IVFESDR 322
           +S  G    +S + D    ++  +  ++     ++T      A++ PD     I F    
Sbjct: 268 WSPTGDY-FLSAKFDGTFYLWETNTWTSEP--WSSTSGFVTGATWDPDGHMVLIAFSKSS 324

Query: 323 EGKEQLYVMQSNGSDQKRI--------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-- 372
                 +  +    D   +        S           W   G+ +A +   G++    
Sbjct: 325 TLGSVHFASKPPSLDAHLLPVDLPEIMSLTGSQGIEKIAWDATGERLALSYKGGDELYKG 384

Query: 373 -IGVMK 377
            I +  
Sbjct: 385 LIAIYD 390


>gi|238502853|ref|XP_002382660.1| catabolite degradation protein, putative [Aspergillus flavus
           NRRL3357]
 gi|220691470|gb|EED47818.1| catabolite degradation protein, putative [Aspergillus flavus
           NRRL3357]
          Length = 754

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 8/142 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G + +          +   D  +     +L         A +SPD S+++  S   
Sbjct: 426 FSHDGTKLV---TAGRDHSVIIYDTSTFAVLHKLMEHDDGVAHACWSPDDSKLITCSQ-- 480

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             ++  V   +                   W+  GD         +   +      G   
Sbjct: 481 -DKKARVWSVDTGRCLLTINHHRQPVTAAAWAADGDSFVTASLDKDS-HLCHWSMRGHAL 538

Query: 384 RLLVEDSNLQAPTWSPSGRSLI 405
            +   D  +Q    +P GR LI
Sbjct: 539 HMWQGDFRVQDCAITPDGRRLI 560



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 68/205 (33%), Gaps = 16/205 (7%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI-------YQSITGEKGD 172
             +RL +   L D   + QI    + ++       +  + D          +        
Sbjct: 365 PDNRLAI---LLDHVKQNQINQCLYHNTATPPSLYSDHMCDRADFPSRPGIELSQHSDEV 421

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +  +       +V+    +S+ + D     + +     D  +    +SP+  K+   + D
Sbjct: 422 WYCQFSHDGTKLVTAGRDHSVIIYDTSTFAVLHKLMEHDDGVAHACWSPDDSKLITCSQD 481

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +      +      R    I + R  + A  ++++G    ++   D+   +    ++ +
Sbjct: 482 KK----ARVWSVDTGRCLLTINHHRQPVTAAAWAADGDS-FVTASLDKDSHLCHWSMRGH 536

Query: 293 ATERLTNTLFINISASYSPDSSQIV 317
           A        F     + +PD  +++
Sbjct: 537 ALHMW-QGDFRVQDCAITPDGRRLI 560


>gi|190896182|gb|ACE96604.1| U5 snRNP-specific protein-like factor [Populus tremula]
          Length = 215

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 67/209 (32%), Gaps = 18/209 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +       + +  ++ +  ++  A+ D      V   D    +  K++    S + + 
Sbjct: 4   FMVMRGHKNAVLDLHWTADGSQIISASPDK----TVRAWDVETGKQIKKMAEHSSFVNSC 59

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S  G   ++S   D    ++  DL+     +     +   + S+S D+S  +F    +
Sbjct: 60  CPSRRGPPLVVSGSDDGTSKLW--DLRQKGAIQTFPDKYQITAVSFS-DASDKIFTGGID 116

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + V      +     +  +        SP G  +  T     K  I  M+    Q 
Sbjct: 117 --NDVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLL-TNGMDNKLCIWDMRPYAPQN 173

Query: 384 R--LLVEDSNLQA------PTWSPSGRSL 404
           R   + E             +WSP G  +
Sbjct: 174 RCVKIFEGHQHNFEKNLLKCSWSPDGSKV 202


>gi|320101653|ref|YP_004177244.1| WD40 repeat-containing serine/threonine protein kinase [Isosphaera
            pallida ATCC 43644]
 gi|319748935|gb|ADV60695.1| serine/threonine protein kinase with WD40 repeats [Isosphaera pallida
            ATCC 43644]
          Length = 1391

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 55/316 (17%), Positives = 107/316 (33%), Gaps = 43/316 (13%)

Query: 134  KDRKQIIGKKFFSSPAS------------WRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                 I  ++F  +PA              + IA    + I +      G   S      
Sbjct: 810  ARGGSIPARRFTVNPADGSVLAELSEGRLVQWIATRRVNAIRRRFGSIDGLARS----PD 865

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
               ++        V+D +  +         + +   RFSP+ +++A       D   V +
Sbjct: 866  GRRLAVAEGAVAHVIDLNRPDPILSLNGHARTIRALRFSPDGRRLA----TAGDDRSVRV 921

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TN 299
             DTR             M++   FS +G+         E   +   D    +  RL  T 
Sbjct: 922  WDTRTGETLAIHRGHVGMVVDLCFSPDGRSLA---SVGEEDHVKVWDATQPSEARLLPTG 978

Query: 300  TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW----- 354
                 +   +  D+ ++   S +     L+ + SN    +R+++    S   P +     
Sbjct: 979  ERERRLELWFW-DAQRLA-TSSQGHPWSLWNLPSN----RRLAEPAMPSIAYPAFPGRLV 1032

Query: 355  --SPQGDLIAFTKFSGEKFAIGVMKKDGSQ----ERLLVEDSNLQAPTWSPSGRSLIFSR 408
              +P+   +A    S  +    V+  + +Q     RL+     ++A T  PSGR L+ S 
Sbjct: 1033 DANPKVGYLAAVAGSAPEERCSVILFETTQGHPLARLVGHTLPIRAVTLGPSGRRLVTSA 1092

Query: 409  -KKDGDTGSKLYSIDL 423
              +      +L+  +L
Sbjct: 1093 FDRGQPHRGELFLWNL 1108


>gi|298246637|ref|ZP_06970442.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
 gi|297549296|gb|EFH83162.1| WD40 repeat, subgroup [Ktedonobacter racemifer DSM 44963]
          Length = 351

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/290 (12%), Positives = 86/290 (29%), Gaps = 29/290 (10%)

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
             ++  K+     +S R + H + D +        G +   +   S S         + +
Sbjct: 3   GVRLHSKRLLDPTSSQRWLEH-LDDHVNSLAWSPDGLW---LAAASVSGP-------ITI 51

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                  + +          E  ++ N   +A    D +    V L + +       +  
Sbjct: 52  FSGSTGQVAHTLTGHGFGTCELGWNANGSLLASVGQDGK----VKLWNPQTGEERFSLPG 107

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             + +    ++  G     +  +   +       +        +         + P  S 
Sbjct: 108 GGAWVEHLAWNPQGNLLATAAGRKLRLWD---SAEGKLLREYPDHRSTIADIGWKP--SS 162

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            V  S   G    + +  +   ++    + + S     WSP G  IA T          +
Sbjct: 163 NVLTSAAYGSLTFWSIDKDEPLER---FEWKGSILTMAWSPDGKHIA-TGDQDATVHFWI 218

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +  G   ++    + ++  +W+ +GR L       G T + ++     G
Sbjct: 219 FQ-SGEDLQMWGYPTKVRELSWNSTGRYLA----TGGSTTATVWDCSGKG 263



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 50/154 (32%), Gaps = 12/154 (7%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           ++  IL   +S +GK    +  +D  +  +    QS    ++          S++     
Sbjct: 189 WKGSILTMAWSPDGKHIA-TGDQDATVHFWIF--QSGEDLQMWGYPTKVRELSWNSTGRY 245

Query: 316 IVFESDREGKEQLYVMQSNGSDQ---KRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKF 371
           +       G     V   +G      K I  +  A+      +  +G LIA     G+  
Sbjct: 246 LA----TGGSTTATVWDCSGKGPAGSKPIELEGHANLITALAFQFKGSLIAAASNEGKVI 301

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              + +            S +   +WSP+ + + 
Sbjct: 302 FWNIERP-RRPLVQADFGSGISQLSWSPNDQYVA 334


>gi|227113130|ref|ZP_03826786.1| putative lipoprotein [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 223

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 21/129 (16%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPV-------SIAFTKFV------- 56
           +N K+ LC + +        +  +   V                  I+  KF        
Sbjct: 1   MNKKVVLCSVFMSAALLSGCATESSRTVEAQKVTSYSTLYQGVRSPISVGKFENRSNYMN 60

Query: 57  -----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVL 111
                 +D LG +   ++   LQ+S  FN++ + + ++         + Q     GA  +
Sbjct: 61  GIFSDGVDRLGNQSKTILVSHLQQSGRFNVLDRTNMEELKAEAGIKGQTQ--TLKGASYV 118

Query: 112 VTGRVIKEG 120
           VTG V + G
Sbjct: 119 VTGDVTEFG 127


>gi|170039925|ref|XP_001847768.1| WD repeat protein 82 [Culex quinquefasciatus]
 gi|167863510|gb|EDS26893.1| WD repeat protein 82 [Culex quinquefasciatus]
          Length = 314

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 16/184 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +SG +  +L + D    N + +      +   P  + + + + +A   + + +++
Sbjct: 118 VEDTFLSGSLDKTLRLWDLRSPNCQGVMH----LNGRPVAAYDPEGLIFAAGVNSESIKL 173

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
           Y +   D       K            +FS +GK  LIS        I  +D       +
Sbjct: 174 YDLRSFDKGPFVTFKLNQEKECDWTGLKFSRDGKTILISTN---GSIIRLIDAFHGTPLQ 230

Query: 296 RLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             T   N   I I AS+SPD SQ +F    +G+  ++   + G     ++ D        
Sbjct: 231 TFTGHLNNKGIPIEASFSPD-SQFIFSGSTDGRVHVWNADT-GYKICVLNGDHPGPIQCV 288

Query: 353 VWSP 356
            ++P
Sbjct: 289 QFNP 292


>gi|157827363|ref|YP_001496427.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Rickettsia
           bellii OSU 85-389]
 gi|157802667|gb|ABV79390.1| Dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Rickettsia
           bellii OSU 85-389]
          Length = 670

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 2/87 (2%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
           + F   +SP G  I++     +   + ++  +  +  +   D    L    W+   R ++
Sbjct: 40  NQFKLGFSPDGKYISYFGEYNKGGGLLIVNSENPKNVIASFDLKQGLYDYMWAYDNRHIL 99

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + + KD    ++LY  DL  +  TL+ 
Sbjct: 100 YLQSKDNQKSNQLYIYDLETKQTTLLT 126



 Score = 40.8 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 48/128 (37%), Gaps = 5/128 (3%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKF 366
           +SPD   I +  +      L ++ S        S D +   +D +W+     I +  +K 
Sbjct: 46  FSPDGKYISYFGEYNKGGGLLIVNSENPKNVIASFDLKQGLYDYMWAYDNRHILYLQSKD 105

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS---PSGRSLIFSRKKDGDTGSKLYSIDL 423
           + +   + +   +  Q  LL  +S ++   ++        ++   K        +Y ++L
Sbjct: 106 NQKSNQLYIYDLETKQTTLLTPESEIKVKFFAKRINKSHKILIGLKSKEQQYFDIYELNL 165

Query: 424 NGRNETLI 431
               + LI
Sbjct: 166 LDYTKKLI 173


>gi|91205286|ref|YP_537641.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Rickettsia
           bellii RML369-C]
 gi|91068830|gb|ABE04552.1| Dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Rickettsia
           bellii RML369-C]
          Length = 670

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 37/87 (42%), Gaps = 2/87 (2%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
           + F   +SP G  I++     +   + ++  +  +  +   D    L    W+   R ++
Sbjct: 40  NQFKLGFSPDGKYISYFGEYNKGGGLLIVNSENPKNVIASFDLKQGLYDYMWAYDNRHIL 99

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLIN 432
           + + KD    ++LY  DL  +  TL+ 
Sbjct: 100 YLQSKDNQKSNQLYIYDLETKQTTLLT 126



 Score = 40.8 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 48/128 (37%), Gaps = 5/128 (3%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKF 366
           +SPD   I +  +      L ++ S        S D +   +D +W+     I +  +K 
Sbjct: 46  FSPDGKYISYFGEYNKGGGLLIVNSENPKNVIASFDLKQGLYDYMWAYDNRHILYLQSKD 105

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS---PSGRSLIFSRKKDGDTGSKLYSIDL 423
           + +   + +   +  Q  LL  +S ++   ++        ++   K        +Y ++L
Sbjct: 106 NQKSNQLYIYDLETKQTTLLTPESEIKVKFFAKRINKSHKILIGLKSKEQQYFDIYELNL 165

Query: 424 NGRNETLI 431
               + LI
Sbjct: 166 LDYTKKLI 173


>gi|73958115|ref|XP_850719.1| PREDICTED: similar to Eukaryotic translation initiation factor 3
           subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b)
           isoform 2 [Canis familiaris]
          Length = 751

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 78/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 226 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 277

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 278 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 323

Query: 315 QIVFESDREGKEQ----LYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S   G +     + +       +KR    +  A +    WS  G    F + + +
Sbjct: 324 YLVTFSPLMGTQDDPQAIIIWDILTGQKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 381

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 382 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 441

Query: 430 LI 431
            +
Sbjct: 442 RV 443



 Score = 43.1 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 408 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 467

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 468 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 520

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      N    + I    +       WSPQG  +          A+  +     
Sbjct: 521 APRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 580

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 581 TVMNIAEHYMASDVEWDPTGRYVV 604


>gi|116182694|ref|XP_001221196.1| hypothetical protein CHGG_01975 [Chaetomium globosum CBS 148.51]
 gi|88186272|gb|EAQ93740.1| hypothetical protein CHGG_01975 [Chaetomium globosum CBS 148.51]
          Length = 808

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 61/195 (31%), Gaps = 34/195 (17%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS--------PDSSQI 316
           +S +G+  L    +     +  + +      R            YS        PD++++
Sbjct: 361 WSKDGEEYLFGFNERGHKHLRVIGMHRQGAVRSIVEESSETFLDYSQKRYYLVSPDTTEL 420

Query: 317 VFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFT------KFSGE 369
           ++ S+R+G   LY+      + K ++++ +               +  T           
Sbjct: 421 LWASERDGWNHLYLYDMKAGEVKSQVTKGEWVVRKVERVDWDARQVWLTVYGVVPDQDPY 480

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
              +  +  DGS   LL         +W+      +FS  +        Y ID   R + 
Sbjct: 481 YAHLARVNLDGSDFTLLTSGDGTH--SWT------MFSTNR--------YFIDTWSRIDQ 524

Query: 430 LINTPAYASDPQWVG 444
           L  T        W G
Sbjct: 525 LPVTALRD---AWSG 536


>gi|322790516|gb|EFZ15378.1| hypothetical protein SINV_04616 [Solenopsis invicta]
          Length = 494

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 73/247 (29%), Gaps = 33/247 (13%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR---------FSPNQQK 225
           SRI F             L ++D    N+  +       L+             S +   
Sbjct: 173 SRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSSDGNS 232

Query: 226 VAYATYDDEDIL--------RVYLMDTRIDRAPKRIGNFRSMILAPRFS----SNGKRAL 273
           V    +++   L         + + D  +++   ++    + + A  ++    S+G R  
Sbjct: 233 VTSVAWNERGNLVAVGTHMGYIQVWDVAVNKQVSKLQGHSARVGALAWNGEVLSSGSRDR 292

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQ 332
           + +Q+D                RL           +SPD+  +       G   +LYV  
Sbjct: 293 LILQRDVRTPCVV------GERRLGAHRQEVCGLKWSPDNQYLA----SGGNDNRLYVWN 342

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSN 391
            +     +   +  A+     WSP    +  +        I       G   + +   S 
Sbjct: 343 LHSLSPIQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQ 402

Query: 392 LQAPTWS 398
           +    WS
Sbjct: 403 VCNLAWS 409



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 5/145 (3%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           ++SP+ Q +A       +  R+Y+ +       +      + + A  +S +    L S  
Sbjct: 321 KWSPDNQYLA----SGGNDNRLYVWNLHSLSPIQTYTEHLAAVKAIAWSPHHHGLLASGG 376

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 I   +  +    +  +T     + ++S  SS++V  +    + Q+ V +     
Sbjct: 377 GTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELV-STHGYSQNQILVWKYPSLT 435

Query: 338 QKRISQDKEASYFDPVWSPQGDLIA 362
           Q                SP G+ I 
Sbjct: 436 QVAKLTGHSYRVLYLAMSPDGEAIV 460


>gi|322702610|gb|EFY94244.1| Pfs, NACHT and WD domain protein [Metarhizium anisopliae ARSEF 23]
          Length = 1063

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 63/203 (31%), Gaps = 28/203 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +   +A A+ D      V L D    +  +        + +  FS +      S   
Sbjct: 701 FSHDSSILASASLDS----TVRLWDASTGQCLQVYTGHSGFMESVAFSHDSSWLA-SGSF 755

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISA--SYSPDSSQIVFESDREGKEQLYVMQSNG 335
           D+ + I+ V  ++   + +       +     S SPD       +D     QL  +    
Sbjct: 756 DDTVKIWDVKPETYQIQPQYAGWNKGDADPLVSLSPD-------TDFSHNSQLLALPVKS 808

Query: 336 SDQKRISQDKEASYFDP-----------VWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQ 382
           S    I         D            + S    L+A    SG    + I + +     
Sbjct: 809 SGSLDIWHVATGLLLDTLHDCQDDIAQTMISYDSRLVACVSKSGTIHIWNIALGELTRRL 868

Query: 383 ERLLVEDSNLQAPTWSPSGRSLI 405
           E  L  D  + +P +S   + L 
Sbjct: 869 EVCLSNDCEMSSPAFSDDSQLLA 891



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 67/210 (31%), Gaps = 22/210 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                 ++      FS + + +A  +YD      V + DT   +  + +   RS++    
Sbjct: 470 RTLNGHEKRTSSVSFSHDSRLLATGSYDK----TVKIWDTATWKCLRTL-VVRSLVATVI 524

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESD 321
           FS +    ++   ++       VD+   AT R   +          + S +S    +   
Sbjct: 525 FSHDSSFLVVVANRN-------VDVWHTATWRRAQSWGSESEVRCFALSHNSRLFAWS-- 575

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            E    + +          I    E S+   V+S    L+A     G    I    + G 
Sbjct: 576 -EAYGTIEIKDVLTGRLLHILTGTEDSHSV-VFSHDSTLLA--SCDGGDIKIW-HTESGQ 630

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
             + L       +  +S   R L +    D
Sbjct: 631 CIQTLESTRYSHSIIFSHDSRMLAWVEWTD 660


>gi|315057007|ref|XP_003177878.1| hypothetical protein MGYG_01939 [Arthroderma gypseum CBS 118893]
 gi|311339724|gb|EFQ98926.1| hypothetical protein MGYG_01939 [Arthroderma gypseum CBS 118893]
          Length = 313

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 9/111 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + +A           VY+ D    R P  +    + + A  FS  GK         
Sbjct: 160 SPDGRLIA----SGHQSGSVYVFDVAEGRMPFSLSGLAAPVRAVSFSPGGKLLA---AAG 212

Query: 280 EAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           ++  I   +  S      LT       S  +S     ++  S  +GK +++
Sbjct: 213 DSTMIMIYETSSGEQFATLTGHSAWVTSLDWSESGEYLLSGSF-DGKVKVW 262



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 13/122 (10%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           ++ V     + ++  + +   S+      SP G LIA    SG  +   V     ++ R+
Sbjct: 131 RIKVWDLQNNLEELWNFETRGSFGMCIDMSPDGRLIASGHQSGSVYVFDV-----AEGRM 185

Query: 386 LVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
               S L AP    ++SP G+ L         T   +Y      +  TL    A+ +   
Sbjct: 186 PFSLSGLAAPVRAVSFSPGGKLLA---AAGDSTMIMIYETSSGEQFATLTGHSAWVTSLD 242

Query: 442 WV 443
           W 
Sbjct: 243 WS 244


>gi|195582286|ref|XP_002080959.1| GD10759 [Drosophila simulans]
 gi|194192968|gb|EDX06544.1| GD10759 [Drosophila simulans]
          Length = 932

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 70/231 (30%), Gaps = 22/231 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +                +    +S + Q +A    D +    V L +T+      
Sbjct: 374 QLLVWEWQSEQYIMKQQGHSSEMTCIAYSSDGQFIATGGEDSK----VKLWNTQSSFCFV 429

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-------FIN 304
                 S +   +FS N K+ L+S   D  +  + V+ +       T+          ++
Sbjct: 430 TFSEHTSGVTGIQFSRN-KKFLVSSSLDGTVRAFDVN-RYRNFRTFTSPNPAQFSCVAVD 487

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S        Q VF         +++          I    E       +SP        
Sbjct: 488 YSGELVAAGGQDVF--------DIFLWSIKTGKLLEIISGHEGPVVSIAFSPVPTSSTLV 539

Query: 365 KFS-GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             S  +   I    +  S+   +   S++   T+SPSG  +  +   +G  
Sbjct: 540 SGSWDKTVKIWNCLESNSEHETIDAVSDVTNVTFSPSGEEIAVATLSEGRN 590



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 6/115 (5%)

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +     L  T++ N +  ++PD + ++      G  ++ V     +  + +S +   +Y 
Sbjct: 4   TTKFSNLLGTIYRNGNLVFTPDGNSVI---SPVGN-RITVYDLKNNKSRTLSLESRYNYT 59

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +   SP G L+      GE   I +M       R   +   +Q   +SP+G    
Sbjct: 60  NIALSPDGSLLIAVNERGEAQLISMMSC-TVIHRHKFQTG-VQCICFSPNGAFFA 112



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 64/151 (42%), Gaps = 7/151 (4%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN-GKRALISVQKDEAMDIYSV 287
                +D+  ++L   +  +  + I      +++  FS       L+S   D+ + I++ 
Sbjct: 493 VAAGGQDVFDIFLWSIKTGKLLEIISGHEGPVVSIAFSPVPTSSTLVSGSWDKTVKIWNC 552

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            L+SN+     + +    + ++SP   +I   +  EG+  L   +   +D     ++ +A
Sbjct: 553 -LESNSEHETIDAVSDVTNVTFSPSGEEIAVATLSEGRNDLSAGRLE-TDIITARKNAQA 610

Query: 348 SYFDPV-WSPQGDLIAFTKFSGEKFAIGVMK 377
           +YF  + +S  G+ I     +G+   I +  
Sbjct: 611 NYFSTIEYSADGECIL---AAGKSANICIYH 638


>gi|194758032|ref|XP_001961266.1| GF13779 [Drosophila ananassae]
 gi|190622564|gb|EDV38088.1| GF13779 [Drosophila ananassae]
          Length = 945

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 74/248 (29%), Gaps = 26/248 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +                +    +S + Q +A    D +    V L +T+      
Sbjct: 374 QLLVWEWQSEQYIMKQQGHSSEMTCIAYSSDGQFIATGGEDSK----VKLWNTQSSFCFV 429

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-------FIN 304
                 S +   +FS N K+ L+S   D  +  + ++ +       T+          ++
Sbjct: 430 TFSEHTSGVTGIQFSRN-KKFLVSSSLDGTVRAFDLN-RYRNFRTFTSPNPAQFSCVAVD 487

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S        Q VF         +++          I    E       +SP        
Sbjct: 488 YSGELVVAGGQDVF--------DIFLWSVKTGKLLEIISGHEGPVVSLAFSPVATSSTLV 539

Query: 365 KFS-GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL----Y 419
             S  +   I    +  S+   L   S++   T+SP+G  +  +      T   +     
Sbjct: 540 SGSWDKTVKIWNCMESNSEHETLDAVSDVTNVTFSPNGEEVAVATLSGNITIFDIKSSSQ 599

Query: 420 SIDLNGRN 427
              + GRN
Sbjct: 600 VTTIEGRN 607



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 45/106 (42%), Gaps = 6/106 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T++ N +  ++PD + ++      G  ++ V     +  + +S +   +Y +   SP G 
Sbjct: 13  TIYRNGNLVFTPDGNSVI---SPVGN-RITVYDLKNNKSRTLSLESRYNYTNLALSPDGS 68

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           L+      GE   I +M       R   +   ++  ++SP+G+   
Sbjct: 69  LLLAVNEQGEAQLISMMSC-TVIHRHKFQTG-IRCLSFSPNGQYFA 112


>gi|114583978|ref|XP_001149723.1| PREDICTED: autophagy-related protein 16-1 isoform 5 [Pan
           troglodytes]
          Length = 444

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 168 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 216

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 217 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 258

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 259 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 310

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 311 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 364

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 365 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 422

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 423 SPSGSHVV 430


>gi|73958107|ref|XP_536894.2| PREDICTED: similar to Eukaryotic translation initiation factor 3
           subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b)
           isoform 1 [Canis familiaris]
 gi|73958109|ref|XP_862080.1| PREDICTED: similar to Eukaryotic translation initiation factor 3
           subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b)
           isoform 3 [Canis familiaris]
 gi|73958111|ref|XP_862108.1| PREDICTED: similar to Eukaryotic translation initiation factor 3
           subunit 9 (eIF-3 eta) (eIF3 p116) (eIF3 p110) (eIF3b)
           isoform 4 [Canis familiaris]
          Length = 785

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 78/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 260 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 311

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 312 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 357

Query: 315 QIVFESDREGKEQ----LYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S   G +     + +       +KR    +  A +    WS  G    F + + +
Sbjct: 358 YLVTFSPLMGTQDDPQAIIIWDILTGQKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 415

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 416 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 475

Query: 430 LI 431
            +
Sbjct: 476 RV 477



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 442 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 501

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 502 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 554

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      N    + I    +       WSPQG  +          A+  +     
Sbjct: 555 APRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 614

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 615 TVMNIAEHYMASDVEWDPTGRYVV 638


>gi|227538014|ref|ZP_03968063.1| dipeptidyl aminopeptidase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227242090|gb|EEI92105.1| dipeptidyl aminopeptidase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 720

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/195 (14%), Positives = 58/195 (29%), Gaps = 42/195 (21%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS--------YSPDS--- 313
           ++++G  A  S        +  +    N     T  L    SA          SPD    
Sbjct: 27  WTADGN-AYYSFSAKGIDIVDLLHSDQNKPFLTTQELIPKDSAQALEVQSFQVSPDGNSL 85

Query: 314 -----SQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFS 367
                +Q V+  +  G    ++         ++ +    +S     +SP G  +A+    
Sbjct: 86  LLFANTQRVWRDNTRG--DYWIFDKKTKKLVQLGKGLPVSSLMFAKFSPDGKKVAYVS-- 141

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNL------------------QAPTWSPSGRSLIFSRK 409
             K  I +     +  + + +D                         WSP G  + + + 
Sbjct: 142 --KHNIYIEDLSSNTFKAITKDGTDRIINGTFDWAYEEEFGCQDGFRWSPDGTKIAYWKL 199

Query: 410 KDGDTGSKLYSIDLN 424
              +T + L   + +
Sbjct: 200 DAKETRNFLMINNTD 214



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 46/338 (13%), Positives = 103/338 (30%), Gaps = 77/338 (22%)

Query: 165 SITGEKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPSRD-QILFEPRFSPN 222
                  D NS +LF  ++ V     +    + D+    +  L        L   +FSP+
Sbjct: 74  QSFQVSPDGNSLLLFANTQRVWRDNTRGDYWIFDKKTKKLVQLGKGLPVSSLMFAKFSPD 133

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--------------APRFSSN 268
            +KVAY +   +  + +  + +   +A  + G  R +                  R+S +
Sbjct: 134 GKKVAYVS---KHNIYIEDLSSNTFKAITKDGTDRIINGTFDWAYEEEFGCQDGFRWSPD 190

Query: 269 GKRALIS------------VQKDEAMDIYSVDLQ----SNATERLTNTLFINISAS---- 308
           G +                +   +++  +++ ++           T   +     S    
Sbjct: 191 GTKIAYWKLDAKETRNFLMINNTDSLYSFTIPVEYPKVGMNPSSCTIWFYNVSDGSTQKA 250

Query: 309 ---------------YSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKE----- 346
                          +  DS  I+ +  + ++   ++ V  +  +  K I Q+ +     
Sbjct: 251 GIEGDDIQHYVPRMEWVLDSRSIILQQLNRKQNVSKIIVCDAINATSKTIHQETDEAWID 310

Query: 347 ----ASYFDPV---WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                +  DP    W  +G    +         I  +   G +  +  ++ ++       
Sbjct: 311 IKARWNNGDPSGWDWINEGKEFIWLSEKNGWRQIYKIDMQGKESLITKDNYDVIQV---- 366

Query: 400 SG-----RSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                    + FS      T   LY I LNG   + + 
Sbjct: 367 DNIDQKANLIYFSASPANATQKFLYKISLNGGQASRVT 404



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 70/218 (32%), Gaps = 24/218 (11%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDR---DGANIRYLTPSRDQILFEPR--FSPNQQKV 226
           D         E    G+  +S  +      DG+  +      D   + PR  +  + + +
Sbjct: 214 DSLYSFTIPVEYPKVGMNPSSCTIWFYNVSDGSTQKAGIEGDDIQHYVPRMEWVLDSRSI 273

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGN----------FRSMILAPR---FSSNGKRAL 273
                + +  +   ++   I+   K I             R     P    + + GK  +
Sbjct: 274 ILQQLNRKQNVSKIIVCDAINATSKTIHQETDEAWIDIKARWNNGDPSGWDWINEGKEFI 333

Query: 274 ISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQ--LY 329
              +K+    IY +D+Q      +T  N   I +  +    ++ I F +      Q  LY
Sbjct: 334 WLSEKNGWRQIYKIDMQGK-ESLITKDNYDVIQVD-NIDQKANLIYFSASPANATQKFLY 391

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +  NG    R++  +         S  G L  F   S
Sbjct: 392 KISLNGGQASRVTPTQYKGTNTYTISSNGKLAIFNSKS 429



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 29/93 (31%), Gaps = 15/93 (16%)

Query: 355 SPQGDLIAF------TKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLI 405
           SP G+ +              +    +  K   +   L +    S+L    +SP G+ + 
Sbjct: 79  SPDGNSLLLFANTQRVWRDNTRGDYWIFDKKTKKLVQLGKGLPVSSLMFAKFSPDGKKVA 138

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +  K +      +Y  DL+      I       
Sbjct: 139 YVSKHN------IYIEDLSSNTFKAITKDGTDR 165


>gi|298228964|ref|NP_942593.2| autophagy-related protein 16-1 isoform 3 [Homo sapiens]
 gi|125656330|gb|ABN48555.1| ATG16 autophagy related 16-like protein 1 [Homo sapiens]
          Length = 444

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 168 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 216

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 217 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 258

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 259 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 310

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 311 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 364

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 365 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 422

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 423 SPSGSHVV 430


>gi|73985517|ref|XP_862065.1| PREDICTED: similar to N-acylaminoacyl-peptide hydrolase isoform 6
           [Canis familiaris]
          Length = 537

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 63/188 (33%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D +  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 29  LCVLDVESGNISVLEGVPESVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRFCTNRRSALY 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNA-- 293
            +D    +  + + +    + +PR S +  R +               +   D  +    
Sbjct: 89  YVDLTGGQC-ELLSDDSLAVSSPRLSPDQCRIVYLRYPSLVPHHQCSQLCLYDWYTKVTS 147

Query: 294 ------TERLT-NTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  N   I  S      +S DS ++VF+S +  ++ L+V+ +       ++
Sbjct: 148 VVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFVVDTQMGSVTSLT 207

Query: 343 QDKEASYF 350
                  +
Sbjct: 208 AGGSGGSW 215



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 39/143 (27%), Gaps = 21/143 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----- 326
                 +     +Y VDL     E L++      S   SPD  +IV+             
Sbjct: 77  IRFCTNR--RSALYYVDLTGGQCELLSDDSLAVSSPRLSPDQCRIVYLRYPSLVPHHQCS 134

Query: 327 QLYVMQ--------SNGSDQKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIG 374
           QL +                +++ ++    Y        WS     + F      +  + 
Sbjct: 135 QLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLF 194

Query: 375 VMKKDGSQERLLVEDSNLQAPTW 397
           V+         L    +    +W
Sbjct: 195 VVDTQMGSVTSLTAGGSGG--SW 215


>gi|74311192|ref|YP_309611.1| hypothetical protein SSON_0610 [Shigella sonnei Ss046]
 gi|73854669|gb|AAZ87376.1| conserved hypothetical protein [Shigella sonnei Ss046]
          Length = 625

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 83/254 (32%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T            S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSLI--LSRDGTKAWVMNRTSNSVPAIDLVTYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+        +I  ++  ++  E            +  +
Sbjct: 440 TGTSGKPGAWVMALSPDERTLLVPGA--GRGNIVRINTITHQKEDFPAGDARGTISAMRF 497

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ V     S   +      + Y     SP G  +A   +  +
Sbjct: 498 RPENGEVIFA-DSQGISRISVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 554

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 555 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 603

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 604 SLDPQAIIRHPQYG 617


>gi|326798981|ref|YP_004316800.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphingobacterium sp. 21]
 gi|326549745|gb|ADZ78130.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Sphingobacterium sp. 21]
          Length = 628

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 59/161 (36%), Gaps = 8/161 (4%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +GK            +IY     +  T+R+T     NI+  +  D  ++VF  +R   
Sbjct: 45  SPSGKYIAFLQSYKGIQNIYLTTWNNTDTKRITTETDKNIANYFWADDDELVFWKERSKD 104

Query: 326 EQLYVMQSNGSD---QKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           + L +   N +    +  I+ +     +     +    LI+  K     F +  +     
Sbjct: 105 DNLNIYAVNRTSLSVRNLITPEPMRFRWVSQQVNNDELLISLNKRDSSAFDVYRLNLHNC 164

Query: 382 QERLLVEDSNLQAPTWSP-SGR-SLIFSRKKDGDTGSKLYS 420
             +++ ++    +  ++   G+  L  +   DG   + LY 
Sbjct: 165 HLKMVAKNPGNISNWFADLDGKVRLAVAS--DGVNETLLYR 203



 Score = 43.1 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 38/96 (39%), Gaps = 4/96 (4%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFS 407
            +   SP G  IAF +       I +   + +  + +    D N+    W+     L+F 
Sbjct: 40  GNFQISPSGKYIAFLQSYKGIQNIYLTTWNNTDTKRITTETDKNIANYFWA-DDDELVFW 98

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           +++  D    +Y+++    +   + TP      +WV
Sbjct: 99  KERSKDDNLNIYAVNRTSLSVRNLITPEPMRF-RWV 133


>gi|167823335|ref|ZP_02454806.1| hypothetical protein Bpseu9_06630 [Burkholderia pseudomallei 9]
 gi|167844886|ref|ZP_02470394.1| hypothetical protein BpseB_06305 [Burkholderia pseudomallei B7210]
          Length = 391

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D + V +R +D    +        +   S+ 
Sbjct: 13  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYV-YR-FDTDSGRVSPVSSAKAENPSYL 70

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 71  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 128

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 129 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 188

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 189 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 222

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    I  +       
Sbjct: 223 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLAHIETVPMTAPGF 282

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 283 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 327


>gi|153844730|ref|ZP_01993692.1| oligogalacturonate lyase [Vibrio parahaemolyticus AQ3810]
 gi|149745190|gb|EDM56441.1| oligogalacturonate lyase [Vibrio parahaemolyticus AQ3810]
          Length = 157

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 34/96 (35%), Gaps = 4/96 (4%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDRE 323
           F+ +GK+ L +   D   + Y +DL++    +LT     N    + S D     +  +  
Sbjct: 43  FTQDGKKLLFAGDFDGNRNYYLLDLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNEL 102

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
               L  +     +++ I    E       W    D
Sbjct: 103 ---NLMKVDLETLEEQVIYTVDEEWKGYGTWVANSD 135



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 15/108 (13%), Positives = 38/108 (35%), Gaps = 9/108 (8%)

Query: 287 VDLQSN-ATERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           VD  +     RLT               ++ D  +++F  D +G    Y++        +
Sbjct: 15  VDSDTQVKVTRLTPTDVICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLDLETQQAVQ 74

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +++ K  + F    S       + K    +  +  +  +  +E+++  
Sbjct: 75  LTEGKGDNTFGGFISTDERAFFYVK---NELNLMKVDLETLEEQVIYT 119


>gi|71281207|ref|YP_269863.1| putative peptidase [Colwellia psychrerythraea 34H]
 gi|71146947|gb|AAZ27420.1| putative peptidase [Colwellia psychrerythraea 34H]
          Length = 819

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 52/181 (28%), Gaps = 17/181 (9%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSS------- 314
           +SS+G+   + ++  +    +   +     E +T     +    + S++           
Sbjct: 372 WSSDGQHLALMLEAWDNKTRWLTTVDFTKNELVTQHKLHDDAWINWSFNEFGWLNASNKA 431

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFA 372
            + + S+  G   LY    N    K  S   E S   P+         F   K     + 
Sbjct: 432 SLYYLSEESGYSHLYYKGLNSKAVKLTSGKFEVSSVTPML--DSQRFIFKANKKHPGIYE 489

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431
           I  +     +   L         T SP    L+           +LY   L  G     I
Sbjct: 490 IYQVDLA-KKLTALTNLGGKNNYTLSPDESKLL-IEHSTVTMPPELYVQSLKAGDAAQRI 547

Query: 432 N 432
            
Sbjct: 548 T 548



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/138 (11%), Positives = 40/138 (28%), Gaps = 13/138 (9%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS---------PQGD 359
           +S D   +    +    +  ++   + +  + ++Q K        WS             
Sbjct: 372 WSSDGQHLALMLEAWDNKTRWLTTVDFTKNELVTQHKLHDDAWINWSFNEFGWLNASNKA 431

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGRSLIFSRKKDGDTGSK 417
            + +         +     +    +L       +  + +P    +  IF   K      +
Sbjct: 432 SLYYLSEESGYSHLYYKGLNSKAVKLT--SGKFEVSSVTPMLDSQRFIFKANKKHPGIYE 489

Query: 418 LYSIDLNGRNETLINTPA 435
           +Y +DL  +   L N   
Sbjct: 490 IYQVDLAKKLTALTNLGG 507


>gi|332252868|ref|XP_003275576.1| PREDICTED: WD repeat-containing protein 5B-like [Nomascus
           leucogenys]
          Length = 330

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 44/264 (16%), Positives = 92/264 (34%), Gaps = 34/264 (12%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP----SRDQILFEPRFSPN 222
           T E GD  +++   S +  S  +            N  Y            +   +FSPN
Sbjct: 3   TKESGDAKAQLALSSSANQSKEVP----------ENPNYALKCTLVGHTDAVSSVKFSPN 52

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A ++ D      + +      +  K +      I    +SS+  R + S   D+ +
Sbjct: 53  GEWLASSSADR----LIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLV-SASDDKTL 107

Query: 283 DIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++  D++S    + L          +++P S+ I+  S     E + + +       + 
Sbjct: 108 KLW--DVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSF---DETVKIWEVKTGKCLKT 162

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSN--LQAPTWS 398
                       ++  G LI    + G      +      Q  + LV+D N  +    +S
Sbjct: 163 LSAHSDPVSAVHFNCNGSLIVSGSYDG---LCRIWDAASGQCLKTLVDDDNPPVSFVKFS 219

Query: 399 PSGRSLIFSRKKDGDTGSKLYSID 422
           P+G+ ++ +     D   KL+   
Sbjct: 220 PNGKYILTATL---DNALKLWDYS 240


>gi|330997170|ref|ZP_08321023.1| peptidase, S9A/B/C family, catalytic domain protein [Paraprevotella
           xylaniphila YIT 11841]
 gi|329570965|gb|EGG52672.1| peptidase, S9A/B/C family, catalytic domain protein [Paraprevotella
           xylaniphila YIT 11841]
          Length = 746

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 43/372 (11%), Positives = 111/372 (29%), Gaps = 86/372 (23%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS-ESVVS 186
           + + D K  K++  +++ +   +                  ++   ++ + FV   ++  
Sbjct: 129 YTVVDFKSGKKVWEQEYPADATAL-----------------DRSPSSNSLAFVRQHNLYV 171

Query: 187 GIIKNSLCVMDRDGAN----IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
              +     +  DG+N       +  +   I     +SP+ +++A+   D   +     +
Sbjct: 172 TTKEGQTMAVSSDGSNDLVYGEAVHRNEFGITKGTFWSPDGKQLAFYRMDQSMVPDYPQV 231

Query: 243 DTRIDRAPKRIGNFRSM----------ILAPR---------------------FSSNGKR 271
           D     A      +             I  P                      +S + ++
Sbjct: 232 DITTRIATTYPCKYPMAGEKMHKVTVGIFTPATGQTVWLQTGDPTDRYFTNISWSPDNRK 291

Query: 272 ALIS-VQKDEAMDIYS-VDLQSNATERLT---NTLFINISA----SYSP-DSSQIVFESD 321
             +  + +D+        D  +   E +          +       + P DSS+ +++S 
Sbjct: 292 IYMIELNRDQNHAELVCYDAATGKKEGVIYEEEHPKY-VEPMHGLQFLPWDSSKFIYQSQ 350

Query: 322 REGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSP--QGDLIA--------------F 363
           R+G   LY+   +   + Q+  +    +       +P   G+ +               F
Sbjct: 351 RDGYNHLYLFDQSKPQASQRHKTFQGGSCEEHVKVTPLTSGEWVVKEVLGFDQKEKSLLF 410

Query: 364 TKF--SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   +  I  ++    +  LL     +   + + +G  +   R         +   
Sbjct: 411 CSNEIHPLQSNIYKVRVKDGKRTLLDNGEGVHYGSVNANGTYVE-DRYSSPTVARGISLT 469

Query: 422 DL-NGRNETLIN 432
           D  NG+   L+ 
Sbjct: 470 DTRNGKERNLLT 481


>gi|224823913|ref|ZP_03697022.1| 40-residue YVTN family beta-propeller repeat protein [Lutiella
           nitroferrum 2002]
 gi|224604368|gb|EEG10542.1| 40-residue YVTN family beta-propeller repeat protein [Lutiella
           nitroferrum 2002]
          Length = 324

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 65/210 (30%), Gaps = 29/210 (13%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y + + +  L V    T       ++G     I     S +GK   I    D  +    
Sbjct: 26  VYVSNEKDHTLSVIDSSTLQVVKTLKVGKRPRGI---TLSKDGKSLFICASDDNTVQ--V 80

Query: 287 VDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +DL S    ++T+ L         + +PD   +   ++        V+       +R++ 
Sbjct: 81  MDLASG---KITHNLPSGEDPEQFALAPDGKSLYIANENS-----NVVTIIDVASRRVTG 132

Query: 344 DKEASYFDP--VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWS 398
             +          SP G   A            +   D +  +L+      Q P    +S
Sbjct: 133 QVDVGVEPEGMAVSPDGRW-AVNTSETTNMVHWI---DTATRKLVDSTLVDQRPRYARFS 188

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             G+ L  S +  G        ID+  R  
Sbjct: 189 ADGKLLWVSAEVGGTVS----VIDVASRKR 214


>gi|172055228|ref|YP_001806555.1| hypothetical protein cce_5143 [Cyanothece sp. ATCC 51142]
 gi|171701509|gb|ACB54489.1| hypothetical protein cce_5143 [Cyanothece sp. ATCC 51142]
          Length = 342

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/285 (14%), Positives = 90/285 (31%), Gaps = 35/285 (12%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-----NQQKVAYATYDDEDILR 238
           V +   +++L   + DG+++  +            + P     +  K+ +     E I  
Sbjct: 28  VWTDTEEDALYRSNLDGSSVTKILDLTTIEGEFRDYDPFGITTDGNKLFWTDRTLEAIFT 87

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             L  T           F +     R  +++G +            +Y  +L      +L
Sbjct: 88  SNLDGTNAAELIDFNAAFGNSDYRAREITTDGHQLFWV--DHSQDSVYRANLDGTNAIQL 145

Query: 298 TNTLFINISASYSPDSS-------------QIVFESDREGKEQLYVMQSNGSDQKRI--- 341
                I++ A++    S               +F +D    + +Y    +G+   ++   
Sbjct: 146 -----IDLEATFGNTGSTSGYTPLGITNNGSQIFWTD-AITDSIYQANLDGTGATQLISL 199

Query: 342 -SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSP 399
            S   +A Y     +  G+ + +T        I     DG+    + E      PT  + 
Sbjct: 200 DSALGDAIYVPRSITTDGNSLFWTDSFFSNEDIYSASIDGTGVTKITELGPSVNPTGITT 259

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           +G  L +           + ++D  G   T+++  A      +  
Sbjct: 260 NGSKLFWLAAVG--QTVNIANLDGTG-ISTIVDLEAEFGMANYSP 301



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 65/190 (34%), Gaps = 22/190 (11%)

Query: 187 GIIKNSLCVMDRDGANIRYLT-------PSRDQILFEP-RFSPNQQKVAYATYDDEDILR 238
              ++S+   + DG N   L         +     + P   + N  ++ +     + I +
Sbjct: 126 DHSQDSVYRANLDGTNAIQLIDLEATFGNTGSTSGYTPLGITNNGSQIFWTDAITDSIYQ 185

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
             L  T   +           I  PR  +++G     +       DIYS  +      ++
Sbjct: 186 ANLDGTGATQLISLDSALGDAIYVPRSITTDGNSLFWTDSFFSNEDIYSASIDGTGVTKI 245

Query: 298 TNTLFINISASYSP-----DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           T      +  S +P     + S++ + +     + + +   +G+    I  D EA +   
Sbjct: 246 T-----ELGPSVNPTGITTNGSKLFWLAAVG--QTVNIANLDGTGISTIV-DLEAEFGMA 297

Query: 353 VWSPQGDLIA 362
            +SPQ   I 
Sbjct: 298 NYSPQAITII 307


>gi|169633755|ref|YP_001707491.1| hypothetical protein ABSDF2203 [Acinetobacter baumannii SDF]
 gi|169152547|emb|CAP01527.1| conserved hypothetical protein [Acinetobacter baumannii]
          Length = 416

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 80/275 (29%), Gaps = 45/275 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF------ 256
              S          S + + +    Y+ +D        L         + + N       
Sbjct: 143 TVNSHGGHPTHASISLDGKFLFVSNYSAFDKGRGSVAVLPILPNGHLGEMLQNIVFAEGS 202

Query: 257 --------RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-- 306
                        +  FS +GK    S   ++ +  +  +      + L      ++S  
Sbjct: 203 GHVKGRQDSGHAHSTTFSPDGKYLYASDLGNDKVYAFRYNPS--KPQPLEADKSRDVSFK 260

Query: 307 -------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS---------QDKEASYF 350
                    +SP+  Q    ++   + ++          K+++           +  S  
Sbjct: 261 HGSGPRHMVFSPNGKQAYITAEM--RSEIVTFNVQDGHLKKVAELKLVHEDKTPEFKSAS 318

Query: 351 DPVWSPQGDL-IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPS--GRSLIF 406
             + SP G   IA  + +  K  +  ++++G   +  V  +N   P  +S    G+ L  
Sbjct: 319 GIILSPNGKYVIAANRGADNKLLVLKIQQNGLLGQPQVYKANGIEPRAFSFDESGKYLYV 378

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +          L+  D    +   +   A  S P 
Sbjct: 379 TNVYSN--NISLFRFDTKNGSLKPLGDAAKISTPT 411


>gi|24212756|ref|NP_710237.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
 gi|24193397|gb|AAN47255.1| OmpA family protein [Leptospira interrogans serovar Lai str. 56601]
          Length = 687

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 9/107 (8%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLT--------NTLFINISASYSPDSSQIVFESDRE 323
             +     E ++IY   ++   T R T        N+ F +   + SPD + ++F SDR 
Sbjct: 144 LAVGRSGFEGLNIYRT-IKDKKTGRWTDPEHLSEINSNFNDKMPAISPDGNFLIFSSDRP 202

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           G    + +  +  + K  S  +  +   P+ S + +++ F    GE+
Sbjct: 203 GGYGDFDLWISVRNPKNGSWSQPKNLGSPLNSSESEILPFIHQDGEQ 249



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 62/235 (26%), Gaps = 65/235 (27%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSV--------------------- 287
           +  N ++    P  S +G+  +    +   +  MDI+                       
Sbjct: 34  QPLNTQNDEYNPIVSPDGRYIVFQSNRPGGEGGMDIWISENIRFLDKEIPAEWTKPVNMN 93

Query: 288 ----------DLQSNATERLTNTLFINISASYSPDS----SQIVFESD------REGKEQ 327
                              L N+       S   DS    S+I F S       R G E 
Sbjct: 94  QNIWEELKRPPAAGVRKPNLFNSNAFEGGISILFDSNNAPSEIYFTSTINLAVGRSGFEG 153

Query: 328 LYVMQSNGSDQKRISQDKEA--------SYFDPVWSPQGDLIAFTKFSGEKFA-----IG 374
           L + ++    +     D E         +   P  SP G+ + F+      +      I 
Sbjct: 154 LNIYRTIKDKKTGRWTDPEHLSEINSNFNDKMPAISPDGNFLIFSSDRPGGYGDFDLWIS 213

Query: 375 VMKKDGSQERL-------LVEDSNLQAPTWSPSGRSLIFSRKK-DGDTGSKLYSI 421
           V                 L    +   P     G  L FS  + D     K++ I
Sbjct: 214 VRNPKNGSWSQPKNLGSPLNSSESEILPFIHQDGEQLYFSSNREDERKKFKIFRI 268


>gi|50546765|ref|XP_500852.1| YALI0B13750p [Yarrowia lipolytica]
 gi|49646718|emb|CAG83103.1| YALI0B13750p [Yarrowia lipolytica]
          Length = 409

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 84/206 (40%), Gaps = 12/206 (5%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +LC  + +G ++ + T  R ++L     S +      A +D  +  +       +  APK
Sbjct: 181 TLCHHNSEGWSLSWNTKDRGKLL---TCSSDG---TVALWDLVNDYKSRSDGKMVTIAPK 234

Query: 252 RI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           ++  + +  +    +  + K    SV   +   +Y +D   N+T   T+T   ++S ++S
Sbjct: 235 QVFIHHQGSVNDVTWHPSEKTLFASV--GDDQKLYVIDTTDNSTVYETDTRTASLSVAFS 292

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P ++++V  S  +G   L+ ++S            E       WSP    +  +    ++
Sbjct: 293 PFNNRVVATSGEDGIVNLWDIKSTSQTPIGRLVGHEGPVGSLDWSPHNPRLLVSGSEDKR 352

Query: 371 FAIGVMKKDG---SQERLLVEDSNLQ 393
             I  + K G     E+L V   + +
Sbjct: 353 AIIWDISKIGQKDGSEKLFVHAGHTE 378


>gi|322708216|gb|EFY99793.1| putative transcription initiation factor TFIID 100Kda [Metarhizium
           anisopliae ARSEF 23]
          Length = 754

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 52/144 (36%), Gaps = 4/144 (2%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    +L V  +D A+ + L    D  +    + PN   V  A+ + +  +R  +    
Sbjct: 512 SGGYDKALRVWMQDHASPQRLLVGHDTAISAIAWHPNGMYVFSASDETDKSIR--MWSVV 569

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +        I A   + NGK  L S      +  + +   +       +      
Sbjct: 570 TGACVRVFAGHTDHITALECAPNGK-ILASADLAGNIFFWDLAKGTRIKRSRGHGRGGIW 628

Query: 306 SASYSPDSSQIVFESDREGKEQLY 329
           S S+S +S+ +     ++G  +L+
Sbjct: 629 SLSFSVESNVLA-SGGQDGTVRLW 651



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/273 (13%), Positives = 79/273 (28%), Gaps = 47/273 (17%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +G  ++ + V   DG  +  +        F      N +K+         +  V   +
Sbjct: 391 VAAGTSESYIRVWSLDGKGLPTMNAHEKDAKF------NSRKLI---GHAAPVYDVSFSE 441

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGK-RALISVQKDEAMDIYSV----------DLQSN 292
           +    A +  G+       P    +G+ + L+S   D  + ++S+               
Sbjct: 442 SASGPAQRLFGDEGRHN--PVM--DGRPKLLLSCSADGHVRLWSLESWACLCLYKSHDGP 497

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L           + P      F S     + L V   + +  +R+    + +    
Sbjct: 498 IYRTL-----------WGPHGHY--FISG-GYDKALRVWMQDHASPQRLLVGHDTAISAI 543

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPSGRSLIFSRKK 410
            W P G  + F+       +I +          +             +P+G+ L      
Sbjct: 544 AWHPNGMYV-FSASDETDKSIRMWSVVTGACVRVFAGHTDHITALECAPNGKILA----- 597

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
             D    ++  DL  +   +  +  +     W 
Sbjct: 598 SADLAGNIFFWDLA-KGTRIKRSRGHGRGGIWS 629


>gi|145516518|ref|XP_001444150.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124411556|emb|CAK76753.1| unnamed protein product [Paramecium tetraurelia]
          Length = 172

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 7/105 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  + +  FSP+   +A  + D+     + L D +  +   ++      + +  FS
Sbjct: 5   LDGHSNWVCQVNFSPDGTTLASGSEDN----SIRLWDVKTGQQKAKLDGHSYPVYSVNFS 60

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +G     +  KD A+ ++  D+++      ++  + NI A + P
Sbjct: 61  PDGTTLA-TGSKDNAIRLW--DVKTGQQISTSDNRYQNILAQFQP 102



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/101 (13%), Positives = 39/101 (38%), Gaps = 7/101 (6%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISA 307
              ++    + +    FS +G     S  +D ++ ++  D+++   + +L    +   S 
Sbjct: 1   MGSKLDGHSNWVCQVNFSPDGTTLA-SGSEDNSIRLW--DVKTGQQKAKLDGHSYPVYSV 57

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           ++SPD + +   S       + +       Q   S ++  +
Sbjct: 58  NFSPDGTTLATGSK---DNAIRLWDVKTGQQISTSDNRYQN 95



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 29/86 (33%), Gaps = 7/86 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + +   S+      + +       QK          +   +SP G  +A     
Sbjct: 16  NFSPDGTTLASGSE---DNSIRLWDVKTGQQKAKLDGHSYPVYSVNFSPDGTTLATGSKD 72

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQ 393
               AI +      Q ++   D+  Q
Sbjct: 73  N---AIRLWDVKTGQ-QISTSDNRYQ 94


>gi|114048861|ref|YP_739411.1| dipeptidyl-peptidase IV [Shewanella sp. MR-7]
 gi|113890303|gb|ABI44354.1| dipeptidyl-peptidase IV. Serine peptidase. MEROPS family S09B
           [Shewanella sp. MR-7]
          Length = 763

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 63/195 (32%), Gaps = 51/195 (26%)

Query: 220 SPNQQKVAYA--TYDDEDILRVYLMDTRID-----------------------RAPKRIG 254
           SP+ Q+V Y     D+++   ++ MD +                         R  +RI 
Sbjct: 69  SPDGQRVTYLAGRKDNQNFYDLWQMDVKTGESSLLLNADKLASNELSDEEKARRERQRIY 128

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
               M     ++ + K  LI    +    +Y   L  N+  +L         A  SP  +
Sbjct: 129 GEGIMEYF--WADDSKALLIPASGN----LYYFSLADNSVSQLPIGEGFATDARLSPKGN 182

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----------------WSPQG 358
            + F  D    + LYV+       + ++ D   +  + +                W+P  
Sbjct: 183 FVSFVRD----QNLYVLNLATKKLEAMTTDGGGAIKNAMAEFVAQEEMDRMTGYWWAPDE 238

Query: 359 DLIAFTKFSGEKFAI 373
             IAFT+       +
Sbjct: 239 SAIAFTRIDESGVEL 253



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/195 (12%), Positives = 59/195 (30%), Gaps = 57/195 (29%)

Query: 261 LAPR---FSSNGKRALISVQKDEA---MDIYSVDLQSNA--------------------- 293
            +PR    S +G+R      + +     D++ +D+++                       
Sbjct: 61  TSPRGLKLSPDGQRVTYLAGRKDNQNFYDLWQMDVKTGESSLLLNADKLASNELSDEEKA 120

Query: 294 --TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
               +      I +   ++ DS  ++  +       LY      +   ++    E    D
Sbjct: 121 RRERQRIYGEGI-MEYFWADDSKALLIPA----SGNLYYFSLADNSVSQL-PIGEGFATD 174

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQ 393
              SP+G+ ++F +       + V+     +   +  D                    + 
Sbjct: 175 ARLSPKGNFVSFVRDQ----NLYVLNLATKKLEAMTTDGGGAIKNAMAEFVAQEEMDRMT 230

Query: 394 APTWSPSGRSLIFSR 408
              W+P   ++ F+R
Sbjct: 231 GYWWAPDESAIAFTR 245



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 67/166 (40%), Gaps = 13/166 (7%)

Query: 202 NIRYLTPSRDQILFEPR--FSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRS 258
           N   L+  +++ ++ PR  + P  + +++     D+  L + L+       PK +   RS
Sbjct: 294 NWVTLSDDKNKDIYLPRVDWLPASKHLSFQWQSRDQQKLDLQLVALDALTKPKTLVKERS 353

Query: 259 -----MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                +     F       + + ++D    +Y  DL+     +LT   +      Y  ++
Sbjct: 354 DAWVNLNNDLHFLKQQSAFIWASERDGFNHLYLFDLKGKLKTQLTKGNWAVDELEYIDET 413

Query: 314 SQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +  V+ + R+       LY +   G   +R+S   EA   +PV++ 
Sbjct: 414 AGWVYFTGRKDTPIEKHLYRVPLAGGKVERVS--SEAGMHNPVFAD 457



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 42/311 (13%), Positives = 93/311 (29%), Gaps = 66/311 (21%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV----------MDRDGANI--- 203
           +++D+    +   +G      L    + VS +   +L V          M  DG      
Sbjct: 156 SLADNSVSQLPIGEGFATDARLSPKGNFVSFVRDQNLYVLNLATKKLEAMTTDGGGAIKN 215

Query: 204 ---RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA----------- 249
               ++       +    ++P++  +A+   D+  +  V   +   D             
Sbjct: 216 AMAEFVAQEEMDRMTGYWWAPDESAIAFTRIDESGVELVTRNEIYADGIKLTEQRYPAAG 275

Query: 250 ----PKRIGNFRSMILA----------------PR--FSSNGKRALISVQKDEAMDIYSV 287
                 ++G       A                PR  +    K      Q   + D   +
Sbjct: 276 KNNVEIQLGVVTLNNKAINWVTLSDDKNKDIYLPRVDWLPASKHLSFQWQ---SRDQQKL 332

Query: 288 DLQSNATERLTNTL-----------FINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           DLQ  A + LT               +N    +    S  ++ S+R+G   LY+    G 
Sbjct: 333 DLQLVALDALTKPKTLVKERSDAWVNLNNDLHFLKQQSAFIWASERDGFNHLYLFDLKGK 392

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQA 394
            + ++++   A             + FT          +  +   G +   +  ++ +  
Sbjct: 393 LKTQLTKGNWAVDELEYIDETAGWVYFTGRKDTPIEKHLYRVPLAGGKVERVSSEAGMHN 452

Query: 395 PTWSPSGRSLI 405
           P ++   +S+ 
Sbjct: 453 PVFA-DSQSVY 462


>gi|300113945|ref|YP_003760520.1| hypothetical protein Nwat_1273 [Nitrosococcus watsonii C-113]
 gi|299539882|gb|ADJ28199.1| conserved hypothetical protein [Nitrosococcus watsonii C-113]
          Length = 781

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/214 (15%), Positives = 69/214 (32%), Gaps = 59/214 (27%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKD----------------EAMDIYSVDLQSNATE 295
           +IG    +++ PR S +GK    ++ +                 +   ++ VDL   +  
Sbjct: 145 KIGEPTCLVVDPRVSYDGKHVAYTLIEGTMRQHQDSPVNKVISPQQASLHFVDLTDLSHT 204

Query: 296 RLTNTLFI-NISASYSPDSSQIVFESDREG--------------KEQLYVMQSNGSDQKR 340
                  + ++   + PD   I+F S+R+                 QL+    +GS    
Sbjct: 205 AWPAVKGVFDMQPQWLPDGD-ILFVSNRDHIKAGAIDGFSPDGEVSQLWRAHIDGSGAHN 263

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           IS D       P+  P G ++         F+      + +Q   L              
Sbjct: 264 ISPDILGDALHPIIHPTGKVL---------FSSWKRDLETTQNSTL-------------D 301

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            +  I   ++DG   + ++     G +   +  P
Sbjct: 302 NKWYIAETRQDGSEHNAIW-----GAHARFLPNP 330


>gi|297823049|ref|XP_002879407.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325246|gb|EFH55666.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 786

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/211 (13%), Positives = 70/211 (33%), Gaps = 23/211 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + + +A A +D +    V++ +    +          +I   RF  N  +   +  
Sbjct: 518 NFSSDGKLLASAGHDKK----VFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLA-TSS 572

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--- 334
            D+ + I+           ++      +S  + P  ++++   D     + + + ++   
Sbjct: 573 FDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVR 632

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                ++        F    S     I   + + ++  I                SN+ +
Sbjct: 633 AGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVHIFK-----------GHSSNVHS 681

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             WSP+G  +        +   KL+S+   G
Sbjct: 682 VCWSPNGELVASVS----EDAVKLWSLSSGG 708



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 27/220 (12%), Positives = 78/220 (35%), Gaps = 24/220 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S      + + + +   +         I+ + RF PN  ++A +++D    ++++   + 
Sbjct: 528 SAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFD--KTIKIW-DASD 584

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTNTLF 302
                + I    + +++  F       L S   +  +  + ++     + A+ ++     
Sbjct: 585 PGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAGASTQV----- 639

Query: 303 INISASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDL 360
                 + P     +   S+      + +     ++++  I +   ++     WSP G+L
Sbjct: 640 -----RFQPRTGQFLAAASE----NTVSIFDIENNNKRVHIFKGHSSNVHSVCWSPNGEL 690

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           +A    S +   +  +   G    L    +   +  + PS
Sbjct: 691 VA--SVSEDAVKLWSLSSGGCVHELENSGNKFHSCVFHPS 728


>gi|218658880|ref|ZP_03514810.1| hypothetical protein RetlI_04046 [Rhizobium etli IE4771]
          Length = 158

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 56/161 (34%), Gaps = 15/161 (9%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPD 312
           ++       FS +G   + S+Q++ A+  + +D +  A     R+T       S S+S  
Sbjct: 4   WKGAHTGVTFSPDGNFLVTSMQEN-ALHGWKLDSKPGAEARHMRMTGYPAKVKSLSWSIK 62

Query: 313 SSQIVFESDREGKEQLYVMQSNGSD------QKRISQDKEASYFDPVWSPQGDLIAFTKF 366
              +       G     V    G D         +            + P  D++A    
Sbjct: 63  GKWLA----SSGAPAAIVWPFQGKDGPMGKAPLELGTRANIMATSVRFHPLEDILAIGFI 118

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
            G   A+ +     +  R   +   + A +WS +G+ L F+
Sbjct: 119 DGMILAVRIADSKEALLRRPGK-GAITAMSWSANGKLLAFA 158



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 52/158 (32%), Gaps = 22/158 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK--RIGNFRSMILAPRFSSNGKRALIS 275
            FSP+   +   T   E+ L  + +D++     +  R+  + + + +  +S  GK    S
Sbjct: 12  TFSPDGNFL--VTSMQENALHGWKLDSKPGAEARHMRMTGYPAKVKSLSWSIKGKWLASS 69

Query: 276 VQKDEAMDIYSVDLQSNA-------TERLTNTLFINISASYSPDSSQIV--FESDREGKE 326
                A        Q           E  T    +  S  + P    +   F        
Sbjct: 70  ----GAPAAIVWPFQGKDGPMGKAPLELGTRANIMATSVRFHPLEDILAIGFI-----DG 120

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +  ++   S +  + +  + +     WS  G L+AF 
Sbjct: 121 MILAVRIADSKEALLRRPGKGAITAMSWSANGKLLAFA 158


>gi|220909624|ref|YP_002484935.1| hypothetical protein Cyan7425_4261 [Cyanothece sp. PCC 7425]
 gi|219866235|gb|ACL46574.1| conserved hypothetical protein [Cyanothece sp. PCC 7425]
          Length = 423

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/259 (13%), Positives = 80/259 (30%), Gaps = 38/259 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           SP+ + +AY   + ++I  V + +    +              +   + NG+ A+ +V+ 
Sbjct: 51  SPDGKTLAYTNSEQKEIGFVNITNPSSPNMLGTTSVASYGEPTSVVITPNGQFAIAAVKN 110

Query: 279 DEAM-DIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFE-----------SDREGK 325
           D +   +  ++  +     +++  +  + S + +PD  ++V               R G 
Sbjct: 111 DPSSGKLVFINFATRQIVGQISIGIGPD-SIAITPDGRKVVIAIEDEEDTDNLPGQRPGA 169

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDP-------------VWSPQGDLIAFTKFSGEKFA 372
             +  +  +   Q ++ + +      P               S  G   A T        
Sbjct: 170 LDVVTINYSNPSQSQLRRVRFNLQGVPGINFKTDAQPEFVTISQDGTTAAVTLQENNG-- 227

Query: 373 IGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           I ++   G+  R+  +      +    +   + + F     G           NGR   L
Sbjct: 228 IALVNIAGNFPRVMRIFSGGIAEHLADTKDDKQIAFVDPFRGRREPDAIGFSGNGRFL-L 286

Query: 431 INTPAY-----ASDPQWVG 444
                        D  W G
Sbjct: 287 TANEGDTALDTFGDGVWSG 305


>gi|220917981|ref|YP_002493285.1| hypothetical protein A2cp1_2882 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219955835|gb|ACL66219.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 532

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 43/245 (17%), Positives = 80/245 (32%), Gaps = 31/245 (12%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              + ++   G + R +  +   +     +SP    +A     D    R  L+  R   A
Sbjct: 88  SCDVRLVPSAGGDARRVAGAVTTLPHGLLWSPAGATLAALGEYDYPTARGTLVVVRAGGA 147

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFINIS 306
           P+ +G     +    F+   +  L     D  +    V       E    L     +   
Sbjct: 148 PRTLGT---AVSFAGFAPGTEDLLFVA--DGRL---LVSRGGGEPEPVAGLDRVGSLEPG 199

Query: 307 ASYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +S           R+G      L V+ ++G  ++   +  +        +P G   A+
Sbjct: 200 PGWS-GGEGPALLV-RQGASAGAALSVVGADGRARRVAERSGDY-----AIAPGGAY-AY 251

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK----KDGDTGSKLY 419
           T   G  +A+ +     +  R  V    +QA  +S  GR+L F       K GD    L 
Sbjct: 252 TVQDGGGYALHL-----AGPRQAVLGKEVQAFAFSRDGRALAFLADATPGKQGDLHLALV 306

Query: 420 SIDLN 424
           +   +
Sbjct: 307 AKPGD 311



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 75/232 (32%), Gaps = 31/232 (13%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V+  DG   R    S D  +            AY   D      ++L   R     K 
Sbjct: 222 LSVVGADGRARRVAERSGDYAIAP------GGAYAYTVQD-GGGYALHLAGPRQAVLGKE 274

Query: 253 IGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +  F        FS +G+           +  D++   +       L   +       ++
Sbjct: 275 VQAF-------AFSRDGRALAFLADATPGKQGDLHLALVAKPGDAVLAREVG---ELCWA 324

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGE 369
             + ++ +    + + +     + G D    +    A+  D   S  G  +AF    +  
Sbjct: 325 QRAPRLAWLERFDARVRSGTAGAGGLDLPSRTYG--ANVTDLELSADGKRLAFLQHTTRG 382

Query: 370 KFAIGVMKKD-----GSQERLLVEDSNLQAPTWSPSGRSLIFSRK--KDGDT 414
            +++ +M        G+    + + +     ++SP  R L +  +  ++G+ 
Sbjct: 383 GYSVDLMLAQLDAPPGTAAVQVAQGAF--GFSFSPDARWLYYRTRCVRNGEG 432



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 53/169 (31%), Gaps = 15/169 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALI---S 275
           S + +++A+  +       V LM  ++D  P               FS + +        
Sbjct: 367 SADGKRLAFLQHTTRGGYSVDLMLAQLDAPPGTAAVQVAQGAFGFSFSPDARWLYYRTRC 426

Query: 276 VQKDEAMDIYSVDLQ----SNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYV 330
           V+  E  D+  V  +        ER+ +             D  +++    R  ++ L V
Sbjct: 427 VRNGEGCDVERVPAEGLAPGAKPERVADGAKSFEYDPR---DPGRLLVTWQRMDRDALDV 483

Query: 331 -MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +  +G   +  +     S    +  P    + +     ++    V + 
Sbjct: 484 GVWKDGKLTRVDTYVLPGS--AQLLGPDSRRLVYAVLHEKRQGAYVAEL 530


>gi|115682299|ref|XP_001199578.1| PREDICTED: similar to Apaf-1, partial [Strongylocentrotus
           purpuratus]
 gi|115720083|ref|XP_001199794.1| PREDICTED: similar to Apaf-1, partial [Strongylocentrotus
           purpuratus]
          Length = 1250

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 69/191 (36%), Gaps = 18/191 (9%)

Query: 199 DGANIRYLTPSRDQ---ILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           DG    + + S  Q   I     +      SP+ Q +   +  +  + R+   +      
Sbjct: 642 DGYVKFWSSESGKQAFSIEAHNNWVNWCEISPDGQTMVTCSSSNVKLWRI--PNGGYPLH 699

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              I       L   FS +G +  +    D  ++I  +DL  + ++ +  +  +  +  Y
Sbjct: 700 QAMIRKIPGDWLRAIFSHDGTKIAMC-SLDGLIEI--LDLTEDRSKMIRASDSVIRALCY 756

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D   I+  SD + K +++   S  SD          S  +   SP G  +A T   G 
Sbjct: 757 TLDDRYIISCSD-DTKVKVFDASSATSDPVMSYTGHTTSVINASPSPDGQYVATT--GGS 813

Query: 370 KFAIGVMKKDG 380
              +  +  DG
Sbjct: 814 DVHVWTI-MDG 823



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 56/153 (36%), Gaps = 7/153 (4%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                + +  +F++ G   L S  +D  +  +S +        +            SPD 
Sbjct: 618 TPHSGVTMCAQFNAAGDHVL-SCGEDGYVKFWSSE-SGKQAFSIEAHNNWVNWCEISPDG 675

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             +V  S      +L+ + + G    + + +     +   ++S  G  IA     G    
Sbjct: 676 QTMVTCS--SSNVKLWRIPNGGYPLHQAMIRKIPGDWLRAIFSHDGTKIAMCSLDG-LIE 732

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           I  + +D S+  +   DS ++A  ++   R +I
Sbjct: 733 ILDLTEDRSKM-IRASDSVIRALCYTLDDRYII 764


>gi|157115819|ref|XP_001658297.1| COMPASS component SWD2, putative [Aedes aegypti]
 gi|108883467|gb|EAT47692.1| COMPASS component SWD2, putative [Aedes aegypti]
          Length = 314

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 71/184 (38%), Gaps = 16/184 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +SG +  +L + D    N + +      +   P  + + + + +A   + + +++
Sbjct: 118 VEDTFLSGSLDKTLRLWDLRSPNCQGVMH----LNGRPVAAYDPEGLIFAAGVNSESIKL 173

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
           Y +   D       K            +FS +GK  LIS        I  +D       +
Sbjct: 174 YDLRSFDKGPFVTFKLNQEKECDWTGLKFSRDGKTILISTN---GSIIRLIDAFHGTPLQ 230

Query: 296 RLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             T   N   I I AS+SPD SQ +F    +G+  ++   + G     ++ D        
Sbjct: 231 TFTGHLNNKGIPIEASFSPD-SQFIFSGSTDGRVHVWNADT-GYKICVLNGDHPGPIQCV 288

Query: 353 VWSP 356
            ++P
Sbjct: 289 QFNP 292


>gi|38512101|gb|AAH61713.1| Fap protein [Rattus norvegicus]
          Length = 350

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 49/160 (30%), Gaps = 34/160 (21%)

Query: 310 SPDSSQIVFESDREGKEQL------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SPD   I  ESD     +       Y+      +  R   +         WSP G  +A+
Sbjct: 106 SPDRQFIYLESDYSKLWRYSYTATYYIYDLQNGEFVR-GYELPRPIQYLCWSPVGSKLAY 164

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--------------------APTWSPSGRS 403
              +     I + ++ G     +                           A  WSP G+ 
Sbjct: 165 VYQN----NIYLKQRPGDPPFQITYTGRENRIFNGIPDWVYEEEMLATKYALWWSPDGKY 220

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTP---AYASDP 440
           L +    D D     YS   +G+    IN P   A A +P
Sbjct: 221 LAYVEFNDSDIPIIAYSYYGDGQYPRTINIPYPKAGAKNP 260


>gi|27804457|gb|AAO22525.1| leunig [Brassica rapa subsp. pekinensis]
          Length = 249

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 70/189 (37%), Gaps = 15/189 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS + + +A A +D +      +  T   +    +    +MI   RFS N  R   +   
Sbjct: 64  FSLDGKMLASAGHDKK----AVIWHTDTMKPKTTLEEHTAMITDVRFSPNLPRLA-TSSF 118

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D+ + ++  D +  +         +  S  + P+   ++   D +G+ + + +  NG+  
Sbjct: 119 DKTVRVWDADNKGYSLRNFIGHSSMITSVDFHPNKDDLICSCDDDGEIRYWSIN-NGTCS 177

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPT 396
           +        + F P     G  +A +  +     + V+  +    R  L    + + +  
Sbjct: 178 RVYKGGSTQTRFQPRV---GKYLAASSAN----VVSVLDVETQACRHSLQGHTNQINSVC 230

Query: 397 WSPSGRSLI 405
           W  SG  L 
Sbjct: 231 WDASGDFLA 239


>gi|45655964|ref|YP_000050.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
 gi|45599197|gb|AAS68687.1| peptidoglycan-associated cytoplasmic membrane protein [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 687

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 46/107 (42%), Gaps = 9/107 (8%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLT--------NTLFINISASYSPDSSQIVFESDRE 323
             +     E ++IY   ++   T R T        N+ F +   + SPD + ++F SDR 
Sbjct: 144 LAVGRSGFEGLNIYRT-IKDKKTGRWTDPEHLSEINSNFNDKMPAISPDGNFLIFSSDRP 202

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           G    + +  +  + K  S  +  +   P+ S + +++ F    GE+
Sbjct: 203 GGYGDFDLWISVRNPKNGSWSQPKNLGSPLNSSESEILPFIHQDGEQ 249



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 62/235 (26%), Gaps = 65/235 (27%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQK---DEAMDIYSV--------------------- 287
           +  N ++    P  S +G+  +    +   +  MDI+                       
Sbjct: 34  QPLNTQNDEYNPIVSPDGRYIVFQSNRPGGEGGMDIWISENIRFLDKEIPAEWTKPVNMN 93

Query: 288 ----------DLQSNATERLTNTLFINISASYSPDS----SQIVFESD------REGKEQ 327
                              L N+       S   DS    S+I F S       R G E 
Sbjct: 94  QNIWEELKRPPAAGVRKPNLFNSNAFEGGISILFDSNNAPSEIYFTSTINLAVGRSGFEG 153

Query: 328 LYVMQSNGSDQKRISQDKEA--------SYFDPVWSPQGDLIAFTKFSGEKFA-----IG 374
           L + ++    +     D E         +   P  SP G+ + F+      +      I 
Sbjct: 154 LNIYRTIKDKKTGRWTDPEHLSEINSNFNDKMPAISPDGNFLIFSSDRPGGYGDFDLWIS 213

Query: 375 VMKKDGSQERL-------LVEDSNLQAPTWSPSGRSLIFSRKK-DGDTGSKLYSI 421
           V                 L    +   P     G  L FS  + D     K++ I
Sbjct: 214 VRNPKNGSWSQPKNLGSPLNSSESEILPFIHQDGEQLYFSSNREDERKKFKIFRI 268


>gi|116621584|ref|YP_823740.1| TPR repeat-containing serine/threonin protein kinase [Candidatus
           Solibacter usitatus Ellin6076]
 gi|116224746|gb|ABJ83455.1| serine/threonine protein kinase with TPR repeats [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 763

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 16/159 (10%)

Query: 21  LVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTK-FVSIDELGGKVSEVVSKDL------ 73
             +          A +         S +++     F      G   S+ +++ L      
Sbjct: 292 WAIAAASITILAAALLVGRGGHHRISSIAVRPFDNFSGAGAAGDWFSDGMTETLIAEMSK 351

Query: 74  QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
            RS    +IS+ S  Q   +   + +      LGA  ++ G  ++ G DR+R+  +L D 
Sbjct: 352 VRS--LKVISRTSVMQYKKSKKPLKQIA--QELGADAVIEGSALRVG-DRVRITAQLIDA 406

Query: 134 KDRKQIIGKKFFSSPASW----RKIAHTISDDIYQSITG 168
              + +  K +           R +A  I+ +I  ++T 
Sbjct: 407 STDQHLWAKDYDGDLKDVFALHRDVARAIAQEIGVTLTA 445


>gi|320591212|gb|EFX03651.1| eukaryotic translation initiation factor subunit [Grosmannia
           clavigera kw1407]
          Length = 727

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 62/183 (33%), Gaps = 17/183 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +S  S   + +L ++   G     ++  ++  + +  +SPN ++             +
Sbjct: 242 VDKSNKSYYGETTLYLLSASGGFDARVSLDKEGPIHDVSWSPNSKEFGVIYGFMPAKTTI 301

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +                 S  + PR    FS +G+  L++   + A  I   DL  +  +
Sbjct: 302 FNQRAEAKH---------SFPIGPRNTITFSPSGRFVLVAGFGNLAGQIDVYDLTKDYLK 352

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             T          +SPDS  +     S R   +    +   G     +  +     ++ +
Sbjct: 353 VCTIESGNPSVCEWSPDSRYLMTATTSPRLRVDNGVKLWHVGGGL--VYNEDMVELYNVL 410

Query: 354 WSP 356
           W P
Sbjct: 411 WRP 413



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 64/211 (30%), Gaps = 21/211 (9%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKD------ 279
            +          V + +      P  +   F+   +  ++++ G   ++    D      
Sbjct: 188 VFVPERKGQPAAVRVFNVPHFSTPASQKTFFKGDKVQLKWNAQGSSLIVLAHTDVDKSNK 247

Query: 280 ---EAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSN 334
                  +Y +        R++ +        S+SP+S +  V       K  ++  ++ 
Sbjct: 248 SYYGETTLYLLSASGGFDARVSLDKEGPIHDVSWSPNSKEFGVIYGFMPAKTTIFNQRAE 307

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQ 393
                 I            +SP G  +    F      I V        ++  +E  N  
Sbjct: 308 AKHSFPI-----GPRNTITFSPSGRFVLVAGFGNLAGQIDVYDLTKDYLKVCTIESGNPS 362

Query: 394 APTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
              WSP  R L+ +        D G KL+ +
Sbjct: 363 VCEWSPDSRYLMTATTSPRLRVDNGVKLWHV 393



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 49/311 (15%), Positives = 101/311 (32%), Gaps = 38/311 (12%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN-SLCVMDRDGANIRYLTPSRDQILFE 216
           +  ++++      G + S     ++       KN  +   + DGA        R     +
Sbjct: 72  VVSNVFELSFSPGGSYLSTWERPAKDENGDATKNLKVWRTETDGATAEVQPLGRFVQKSQ 131

Query: 217 PRFSPNQQKVA-YATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALI 274
             ++    +   +      + +  Y          K R+    +  LAP    N   A+ 
Sbjct: 132 TGWNLQYTEDEQFCARLVTNEVHFYQSSDLTTVHDKLRVEGVATFALAPG--KNHSVAVF 189

Query: 275 SVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-------- 323
             ++        +++V   S    + T      +   ++   S ++  +  +        
Sbjct: 190 VPERKGQPAAVRVFNVPHFSTPASQKTFFKGDKVQLKWNAQGSSLIVLAHTDVDKSNKSY 249

Query: 324 -GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS- 381
            G+  LY++ ++G    R+S DKE    D  WSP                 G M    + 
Sbjct: 250 YGETTLYLLSASGGFDARVSLDKEGPIHDVSWSPNSKEFGVI--------YGFMPAKTTI 301

Query: 382 -QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
             +R   + S    P    T+SPSGR ++ +    G+   ++   DL      +      
Sbjct: 302 FNQRAEAKHSFPIGPRNTITFSPSGRFVLVAGF--GNLAGQIDVYDLTKDYLKVCTI--E 357

Query: 437 ASDPQ---WVG 444
           + +P    W  
Sbjct: 358 SGNPSVCEWSP 368


>gi|261196868|ref|XP_002624837.1| extracellular dipeptidyl-peptidase Dpp4 [Ajellomyces dermatitidis
           SLH14081]
 gi|239596082|gb|EEQ78663.1| extracellular dipeptidyl-peptidase Dpp4 [Ajellomyces dermatitidis
           SLH14081]
          Length = 777

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 36/101 (35%), Gaps = 23/101 (22%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
              ++      +   +++D+        W P G+ IA+ +  G    I   +KDG+  ++
Sbjct: 122 SNYFIQDVKTGELTPLAEDQAGDLQYAAWGPVGNTIAYVR--GNNLFI---RKDGTTTQI 176

Query: 386 LVEDS---NLQAPTW---------------SPSGRSLIFSR 408
             +         P W               SP G+SL F R
Sbjct: 177 TTDGGPDTFNGVPDWVYEEEIFGDRYAFWFSPDGKSLAFLR 217



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 46/119 (38%), Gaps = 5/119 (4%)

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMK 377
           SD  G   +Y+    G     ++  +           + +LI +  TK    +  +  + 
Sbjct: 365 SDESGWAHIYLFPVKGGKPIALTSGEWEVTGIVSIDTERELIYYLSTKHHPTERHLYSVS 424

Query: 378 KDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               + + LV+D+     + ++S  G   I + +       +LYSID + +   +I + 
Sbjct: 425 YSTLKTKALVDDTVAAYWSASFSSKGGYYILTYRGPDVPYQELYSID-SPKPLRVITSN 482


>gi|268317599|ref|YP_003291318.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Rhodothermus marinus DSM 4252]
 gi|262335133|gb|ACY48930.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Rhodothermus marinus DSM 4252]
          Length = 907

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 3/88 (3%)

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVEDSN-LQAPT 396
           R     +        SP G  + F K       I +   D      R L  D   +    
Sbjct: 36  RELFFGDPEISGAQLSPDGRWLTFIKPYNGVRNIWIKGIDEPFEAARPLTADERPVPGYF 95

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           WS   R +++ + K G+    +Y++D  
Sbjct: 96  WSEDSRYVLYVQDKGGNEDFHVYAVDPT 123



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 30/242 (12%), Positives = 64/242 (26%), Gaps = 61/242 (25%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTNTLFINISAS 308
           + +      I   + S +G+        +   +I+   +D    A   LT          
Sbjct: 36  RELFFGDPEISGAQLSPDGRWLTFIKPYNGVRNIWIKGIDEPFEAARPLTADERPVPGYF 95

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQ----------KRISQDKEAS---YFDPVWS 355
           +S DS  +++  D+ G E  +V   + +            + ++  +      Y  P  +
Sbjct: 96  WSEDSRYVLYVQDKGGNEDFHVYAVDPTQPPDPETGVPPARDLTPYENTRAVIYAVPEAT 155

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--------------------------- 388
           P   L+           +  +        L++                            
Sbjct: 156 PGQILVGLNDRDPRWHDVYRIDLATGARTLVLRNEQELAGFTFDLEGRLRLATRIAEDGS 215

Query: 389 ------DSNLQAPTW--------SP-----SGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                 D +   P +        SP      GR +  +  +      +L   D     ET
Sbjct: 216 TEILRVDGDTLIPVYTCSVEESCSPLRFHKDGRRVYLTTNRGDRDLIELVLFDPETGEET 275

Query: 430 LI 431
            +
Sbjct: 276 FV 277


>gi|145478261|ref|XP_001425153.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392221|emb|CAK57755.1| unnamed protein product [Paramecium tetraurelia]
          Length = 199

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/157 (12%), Positives = 64/157 (40%), Gaps = 11/157 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           S+C+ D      +         +    FS +   +A  ++D+     + L D +  +   
Sbjct: 16  SICLWDVKTGQQKAKLIGHSNGILSVNFSRDNTTLASGSFDN----SIRLWDVKTRQLKT 71

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           ++ +  + + +  FS +G + + S   D ++ I+  D+++      ++  + +I A + P
Sbjct: 72  KLDDHPATVNSVNFSPDGTKLV-SGSNDNSVHIW--DVKTGQQILSSDNRYKDILAQFQP 128

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           ++    F ++      ++   +     +++    + +
Sbjct: 129 NN----FTNNLLQNNGIFCSLTTLLISQQLIFQSQGA 161


>gi|326522959|dbj|BAJ88525.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 555

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 43/120 (35%), Gaps = 17/120 (14%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF--SSNGKRAL 273
            P  S +  K+A+   + + +        R+    +      + + +  +  + +     
Sbjct: 416 FPTISKDGSKLAFVDNEFKAVWLADTQGLRVVYEKR----GPNSVFSTAWNQNPDKDTLY 471

Query: 274 I----SVQKDEAMDIYSV-----DLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +    S    + ++IY++            +RLT   F N   S +    ++ F  DR+G
Sbjct: 472 VCVGPSFSASKPLEIYAISNASGPSAGRKVQRLTAGNFNNAFPSSNAQGDKLCF--DRQG 529



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 22/131 (16%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--------- 324
           ++ ++     +Y  +L    TERLT     ++S + SP    +   + R           
Sbjct: 170 VTRRRTPWTVVYRTNLGDGKTERLTPPGQYDVSPAVSPSGKMVAVANFRGNRWTGEIERL 229

Query: 325 KEQLYVMQSN-----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAIGVM 376
              + +M  +     G  +K + +D       P W    ++I F + +GE    +A+   
Sbjct: 230 NTDIVIMNVDKAAQGGRGRKILIRDG----GWPTWGSD-NVIFFHRGTGESPTNWAVFRY 284

Query: 377 KKDGSQERLLV 387
                +   + 
Sbjct: 285 DIATKKTVQVT 295



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/179 (8%), Positives = 44/179 (24%), Gaps = 30/179 (16%)

Query: 223 QQKVAYATY-----DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              + Y +             V       D   +R+       ++P  S +GK   ++  
Sbjct: 158 GHLLVYVSTKEPVTRRRTPWTVVYRTNLGDGKTERLTPPGQYDVSPAVSPSGKMVAVANF 217

Query: 278 KDE---------AMDIYSVDLQ-----SNATERLTNTLFINISASYSPDSSQIVF----E 319
           +             DI  +++          + L          ++  D+  ++F     
Sbjct: 218 RGNRWTGEIERLNTDIVIMNVDKAAQGGRGRKILIRDGGW---PTWGSDN--VIFFHRGT 272

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +      ++          +++     +      S     +A      +     +   
Sbjct: 273 GESPTNWAVFRYDIATKKTVQVTPVNIDAMTPAAIS--ETRVAVATIRQKSMQAAMTTP 329



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 26/77 (33%), Gaps = 14/77 (18%)

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN------------GR 426
           DG  ERL        +P  SPSG+ +  +  +      ++  ++ +            GR
Sbjct: 187 DGKTERLTPPGQYDVSPAVSPSGKMVAVANFRGNRWTGEIERLNTDIVIMNVDKAAQGGR 246

Query: 427 NETLINTPAYASDPQWV 443
              ++        P W 
Sbjct: 247 GRKILIRDG--GWPTWG 261


>gi|299470941|emb|CBN79925.1| WD66_PHYPO66 kDa stress protein (p66) [Ectocarpus siliculosus]
          Length = 643

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 53/147 (36%), Gaps = 18/147 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----FRSMILAPRFSSNGKRAL 273
           RFSP+  K+A  + D +    V+L D +       +G         I +  +S +     
Sbjct: 206 RFSPDGSKIATCSSDKK----VWLYDGKTGEPLSTLGEAAGAHAGSIYSLAWSPDSSSVA 261

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----EGKEQLY 329
            +   D+ + ++  D  S A    T+T  I+ S         + F  ++         + 
Sbjct: 262 -TASADKTVRLF--DAASGA---CTHTWSISDSPGVGDMQVAVAFCGEQLVSVSLNGNVN 315

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSP 356
           ++ +     + + Q  + +      SP
Sbjct: 316 MLDAGSERPRDVYQAHQGAITAMTRSP 342



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/215 (12%), Positives = 57/215 (26%), Gaps = 22/215 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           ++    +      +FSPN   VA  + D    +R++  D    +    +      I    
Sbjct: 61  FVYRGHNSKTTVAKFSPNGFWVA--SADITGKVRIWAWDNPEHQLKIEVFGLGGAIKDLA 118

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +    KR +             +    +    +       IS  Y       +     + 
Sbjct: 119 WGPESKRIVCCGAGSGVNARAFMWDTGSNLGEVVGHSKRVISCDYRQVRPYRIMTGSEDH 178

Query: 325 KEQLY-----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +   Y      M  + ++Q               +SP G  IA          + +    
Sbjct: 179 RTIFYQGPPFKMDHSNNNQ------HTNFVNCVRFSPDGSKIATCSSDK---KVWLYDGK 229

Query: 380 GSQERLL------VEDSNLQAPTWSPSGRSLIFSR 408
             +              ++ +  WSP   S+  + 
Sbjct: 230 TGEPLSTLGEAAGAHAGSIYSLAWSPDSSSVATAS 264



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/169 (10%), Positives = 50/169 (29%), Gaps = 25/169 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL------ 273
           +P   ++A  + + +  + VY       R  K +   R  +    +S +G          
Sbjct: 483 APGAGEIAVGSKEGK--IYVYETAGDELRETKVVDGHRGEVTCVAYSPDGTLLAAGDAAR 540

Query: 274 -ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            ++V +         D +     +           ++SP+ + +       G ++   + 
Sbjct: 541 EVTVWRAGGDW----DAEVRGLWQ--FHTARVACLAWSPEGTYLA----SGGLDENVFVW 590

Query: 333 SNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +    ++R+  +   +       W   G        +G    +      
Sbjct: 591 NPAKPRRRVHYTFANKDGVEGLAWLSDG----VVASAGGDHCVATWDIT 635


>gi|164605313|dbj|BAF98477.1| similar to hypothetical (di heme) protein [planctomycete KSU-1]
          Length = 810

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/261 (13%), Positives = 77/261 (29%), Gaps = 58/261 (22%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T   D     P + P   ++     + +++              K + N      A  F 
Sbjct: 68  TEKGDPYQNYPHYVPEGSRIVLFDLNSKEL--------------KVLTN----DFATAFD 109

Query: 267 S----NGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
                +GK+   +   +K     I+ +++  +   ++T+      +  Y          S
Sbjct: 110 PCTYWDGKKFTFAGIHKKGGGCQIWEMNIDGSGLRQMTDYKGTCRAPIYYAAG------S 163

Query: 321 DREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKFSGEKFAIGVM-- 376
             EGK + ++  +    D K     ++  +     SP G        +    F +     
Sbjct: 164 IEEGKGRVIWRDRYFEGDWKERGTVEKTGFIIFAGSPDGVRDELHNSYVYNLFRLDTQGG 223

Query: 377 -----------------KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR------KKDGD 413
                              + + +++    S+   P  +P G  ++FS       + +G 
Sbjct: 224 HVTERITGHVLSGIEFPSLNTTIDQITYNLSSNFDPWLTPDGN-ILFSSVQANGTRAEGK 282

Query: 414 TGSKLYSIDLNGRNETLINTP 434
               L   + +G     I   
Sbjct: 283 GRVMLCVDNWDGAYPRPIYGN 303


>gi|86144001|ref|ZP_01062339.1| hypothetical protein MED217_13576 [Leeuwenhoekiella blandensis
           MED217]
 gi|85829461|gb|EAQ47925.1| hypothetical protein MED217_13576 [Leeuwenhoekiella blandensis
           MED217]
          Length = 860

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 79/217 (36%), Gaps = 33/217 (15%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   V Y  +  +    + L+ T  +   +                NG+    S   +
Sbjct: 44  SPDGHWVTYNRHYKKGNDTLVLVHTETEHRHEI--------------PNGQSLQFSNNSN 89

Query: 280 EAM-----DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            A      ++  ++L++++ +  T   + +  AS+S   +   F    + K Q   +   
Sbjct: 90  WASFKTPEEVNLINLKNDSIK--TFNTYTD--ASFSASGTH--FLLKNKKKHQGQFLHLE 143

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQ 393
             +  +++  K+  +     +           S     + V+  DG Q    L      +
Sbjct: 144 SGNSLKLTNLKDVYFSKLTANA-----VVVLQSDPGAELQVLNLDGFQVTQKLKTTGTFR 198

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           A  W+P+G+S  F+  ++ +  + L  +DL     TL
Sbjct: 199 AIHWNPNGKS--FTVLREEENNNSLLYVDLETGVFTL 233


>gi|157963332|ref|YP_001503366.1| peptidase S9 prolyl oligopeptidase [Shewanella pealeana ATCC
           700345]
 gi|157848332|gb|ABV88831.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella pealeana ATCC 700345]
          Length = 831

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 72/200 (36%), Gaps = 13/200 (6%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R  + + ++     A ++S +G    + ++  +  D +   +        T     + + 
Sbjct: 367 RKLQLMQDWGWSQSAIQWSESGDNVAVMLEAVDNKDRWIATVNFEKASLTTQHRLHDDAW 426

Query: 308 S--------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                    + P+S  + + S+  G   LY ++  G   K ++Q K     D    P+  
Sbjct: 427 VNYNFNQYGWLPNSDSLYYLSEETGFSHLY-LKEQGEKAKALTQGKFV-VSDITLGPKAQ 484

Query: 360 LIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            I +   K       +  ++    ++  L +       T SP G +L+ +        ++
Sbjct: 485 FIYYKANKTHPGMDNVYRVEIATGKDEQLTQWQGQLDYTLSPDGTALLLNASTR-IQPAE 543

Query: 418 LYSIDLNGRNETLINTPAYA 437
           L+   + G  + L N  + A
Sbjct: 544 LFVQAIGGELKQLTNYTSDA 563



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 51/139 (36%), Gaps = 8/139 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + PN   + Y + +       +L         K +   + ++         +       K
Sbjct: 436 WLPNSDSLYYLSEETGFS---HLYLKEQGEKAKALTQGKFVVSDITLGPKAQFIYYKANK 492

Query: 279 D--EAMDIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                 ++Y V++ +   E+LT     ++   + SPD + ++  +    +     +Q+ G
Sbjct: 493 THPGMDNVYRVEIATGKDEQLTQWQGQLDY--TLSPDGTALLLNASTRIQPAELFVQAIG 550

Query: 336 SDQKRISQDKEASYFDPVW 354
            + K+++     ++ +  W
Sbjct: 551 GELKQLTNYTSDAFNNYAW 569



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 70/213 (32%), Gaps = 38/213 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + Q + +A        + Y   +    A   +   +        S++ +R +++  K
Sbjct: 77  WSDDGQSIYFARQAHGAPTKTYYQQSIDGTAASELALNQLH------SADQRRGVLNNDK 130

Query: 279 DEAMDIY-----SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                IY       DL S    +LT          +  +     ++ D      ++ +  
Sbjct: 131 TRKAYIYQGNLFVKDLNSGKVSQLTRQNTAVDGVRFLNNGDISYWQGD-----NIFKIHQ 185

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER------LLV 387
                + I+  K A+    V +P    IA  K          M++D ++ +      L  
Sbjct: 186 GSGLVEEIASIKMAAEPKGVQAP-STYIA--KQQHRLIQYVAMQQDNAKAKQDYKAELTK 242

Query: 388 EDSNLQAPTW-------------SPSGRSLIFS 407
            D  + A TW             SP GR +I +
Sbjct: 243 ADPTMSAKTWYLGDKEVVTNLSLSPDGRYVILA 275


>gi|325119281|emb|CBZ54835.1| conserved hypothetical protein [Neospora caninum Liverpool]
          Length = 546

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 51/304 (16%), Positives = 90/304 (29%), Gaps = 62/304 (20%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D   +   GE GD     L      V+ +    L +   DG N       R   L     
Sbjct: 223 DGAVRLWKGESGDAAGAPLKGHTKPVTALAWQPLHLAPSDGGNATSEEKPRFPSLLLASA 282

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +                V L +T   +  + +   R  I   ++S   +  L +  +D
Sbjct: 283 SKDST--------------VRLWNTATHQCLRVLSGHRESITQVKWSGEKEGYLYTASRD 328

Query: 280 EAMDIY-------SVDLQSNATERLTNTLFINI-----SASYSPDSSQIVFESDRE---- 323
             + ++         DL+ +      N+L +N      S  +    +Q  F S +E    
Sbjct: 329 TTLKVWDCVSGRLVSDLKGHG--HWVNSLALNTDYVIRSGPFGEKGAQS-FASFQEMQEA 385

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            +++      N   +K +S            S    LI +      +    V +  G   
Sbjct: 386 ARKRYQACVKNSGGEKVLSG-----------SDDSTLILWKHVGEPRGLAQVCRMTG--- 431

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP--- 440
                   +    +SP GR +        D   +L+    +GR    + T      P   
Sbjct: 432 ----HQKLVNHVAFSPDGRYIA---SASFDKSIRLW----DGRRGVYLATLRGHVGPIYQ 480

Query: 441 -QWV 443
             W 
Sbjct: 481 LAWS 484



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 17/146 (11%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +KV   + D   IL  ++ + R      R+   + ++    FS +G+    S   D+++
Sbjct: 399 GEKVLSGSDDSTLILWKHVGEPRGLAQVCRMTGHQKLVNHVAFSPDGRYIA-SASFDKSI 457

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------EGKEQLYVMQSNGS 336
            ++           L      ++   Y     Q+ + SD        G   L V Q+   
Sbjct: 458 RLW----DGRRGVYLATLRG-HVGPIY-----QLAWSSDSRLLLSASGDSTLKVWQAETR 507

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIA 362
             K          +   WS  G   A
Sbjct: 508 KLKADLPGHADEVYAVDWSVVGSYAA 533


>gi|308186489|ref|YP_003930620.1| Vegetative incompatibility protein HET-E-1 [Pantoea vagans C9-1]
 gi|308056999|gb|ADO09171.1| Vegetative incompatibility protein HET-E-1 [Pantoea vagans C9-1]
          Length = 354

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 6/170 (3%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
              +   S + K A+ S    E  D+   DL +    ++        +A +SPD  + +F
Sbjct: 58  HNNSLAVSPDEKTAVASYS--ERSDVVVYDLAAGKVRKVMKGYVTPRNALFSPDG-KAIF 114

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD      +  + +   D          + F    S  G  +     +    ++  +  
Sbjct: 115 LSDSS-LGVVKKISTGTLDVAATLPLGPGA-FGTAISRDGQRLYVNNEAASTLSVYDLTH 172

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           D     +       Q    SP G+++ +     GD  + + ++  + R E
Sbjct: 173 DRPIAVVTGFAQPRQGIKISPDGKTV-YVTNFKGDKITLVDAVTGDIRGE 221



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 73/222 (32%), Gaps = 18/222 (8%)

Query: 161 DIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+  ++    G F + I    + + V+    ++L V D        +     Q     + 
Sbjct: 132 DVAATLPLGPGAFGTAISRDGQRLYVNNEAASTLSVYDLTHDRPIAVVTGFAQPRQGIKI 191

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + V    +      ++ L+D         I  F S + A   S++G+         
Sbjct: 192 SPDGKTVYVTNF---KGDKITLVDAVTGDIRGEITGF-SKLRAISVSADGRTLY--AANS 245

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +  I  VD        +T T+ +       + +PD+  +   S   G   L V+ +   
Sbjct: 246 GSNTIAVVD---TQKHVITATIPVGQDPYGAALTPDNRYVY--SGNLGDNSLSVIDTAAG 300

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                    +A     V++  G          +  +I V+  
Sbjct: 301 KVVSTVTGLDAPRQAIVFNKDGTR---AWVLNKDLSIAVVDL 339


>gi|213402153|ref|XP_002171849.1| U3 snoRNP-associated protein Utp1 [Schizosaccharomyces japonicus
           yFS275]
 gi|211999896|gb|EEB05556.1| U3 snoRNP-associated protein Utp1 [Schizosaccharomyces japonicus
           yFS275]
          Length = 865

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/218 (11%), Positives = 73/218 (33%), Gaps = 16/218 (7%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A  +     +L   + + + +    +      ++ +  +S +G+R +++   D  +
Sbjct: 309 GEWIAIGSSKLGQLL---VWEWQSESYILKQQAHYDVLSSLAYSPDGQR-VVTSADDGKL 364

Query: 283 DIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++  DL S  +    T          ++   + ++F S  +G  + + +     + +  
Sbjct: 365 KLW--DLHSGFSIVTFTQHTAAVTGICFAKRGN-VLFSSSLDGSVRAWDL-IRYRNFRTF 420

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSP 399
           +      +      P G+++         F I +      Q  ERL      +   ++S 
Sbjct: 421 TAPSRVQFSCVAVDPAGEIVCAGSQD--TFEIYMWSVQTGQLLERLAGHQGPISTLSFSN 478

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
               L        D   +++ I         +  P+  
Sbjct: 479 DSGVLASGSW---DKTVRVWDIFKRSGIVEPLPMPSDV 513


>gi|159122348|gb|EDP47469.1| transcriptional repressor TupA/RocA, putative [Aspergillus
           fumigatus A1163]
          Length = 702

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 16/157 (10%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-------ISAS 308
             S++   RFS +GK                 D+ +           ++        S  
Sbjct: 282 HDSVVCCVRFSRDGKYLA----TGCNRSAQIFDVTTGQIVATLQDESVDKDGDLYIRSVC 337

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +   ++    +Q+ V        K I    E   +   ++  G  IA +    
Sbjct: 338 FSPDGKYLATGAE---DKQIRVWDIAARTIKHIFTGHEQDIYSLDFAGNGRYIA-SGSGD 393

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +   +  +  DG     L  +  +     SP G  + 
Sbjct: 394 KTVRLWDI-LDGKLVYTLSIEDGVTTVAMSPDGHYVA 429


>gi|70984084|ref|XP_747562.1| transcriptional repressor TupA/RocA [Aspergillus fumigatus Af293]
 gi|66845189|gb|EAL85524.1| transcriptional repressor TupA/RocA, putative [Aspergillus
           fumigatus Af293]
          Length = 702

 Score = 47.3 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 16/157 (10%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-------ISAS 308
             S++   RFS +GK                 D+ +           ++        S  
Sbjct: 282 HDSVVCCVRFSRDGKYLA----TGCNRSAQIFDVTTGQIVATLQDESVDKDGDLYIRSVC 337

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +   ++    +Q+ V        K I    E   +   ++  G  IA +    
Sbjct: 338 FSPDGKYLATGAE---DKQIRVWDIAARTIKHIFTGHEQDIYSLDFAGNGRYIA-SGSGD 393

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +   +  +  DG     L  +  +     SP G  + 
Sbjct: 394 KTVRLWDI-LDGKLVYTLSIEDGVTTVAMSPDGHYVA 429


>gi|312200803|ref|YP_004020864.1| hypothetical protein FraEuI1c_7027 [Frankia sp. EuI1c]
 gi|311232139|gb|ADP84994.1| WD40 repeat, subgroup [Frankia sp. EuI1c]
          Length = 535

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 63/407 (15%), Positives = 126/407 (30%), Gaps = 35/407 (8%)

Query: 26  GFFPTSIHAFV-KVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQ 84
             FP S  A        + + +P S+A     +  +    +++  +    R     L   
Sbjct: 153 PLFPASSRAVAPAFPVTANDAAPRSVASAPISAGGDPPQGLTDQPAVGRSRPGQTPLTGP 212

Query: 85  DSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKF 144
               Q++  PD +     + + G   L+ G              RLWDV +  +      
Sbjct: 213 RHPGQRLAGPDDLVYAVAFAAGGR--LLAGASRGGAGPENGGTIRLWDVTEPPR------ 264

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
              P  W+K     +D +        G        ++ +   G ++  L  M   G    
Sbjct: 265 ---PGPWKKSLVGHTDWVLAVTAALGG------QLLASAGADGTVR--LWDMAEPGPPRP 313

Query: 205 --YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                      +    FS + + +A A +D    L               +      + +
Sbjct: 314 CGAPLDGHQDWVLSVAFSGDGRILASAGHDGTVRLWDVAEPRSPKPCGAPLVGHAGWVRS 373

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFE 319
             FS  G     S  +D  + ++ V   S A    + L +      +  +SP    +   
Sbjct: 374 VAFSGRGDVLA-SGSRDGTVRLWDVAEPSRARAAGQPLADHGTSVQAVVFSPREQLLA-S 431

Query: 320 SDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              +G  +L+ + +    +      Q    +     ++P G L+A     G  +   V +
Sbjct: 432 GGGDGAVRLWDVSAPARPRPAGPPIQGHAGAVLAAAFAPDGRLLASGGADGTVWLWDVTE 491

Query: 378 KDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                     L    + ++A  +SP+G  L        D   +L+ +
Sbjct: 492 PASPLPVGPPLADHGAAVRAVAFSPNGEFLA---SAGNDHTVRLWRL 535


>gi|261199714|ref|XP_002626258.1| WD repeat protein [Ajellomyces dermatitidis SLH14081]
 gi|239594466|gb|EEQ77047.1| WD repeat protein [Ajellomyces dermatitidis SLH14081]
 gi|239615630|gb|EEQ92617.1| WD repeat protein [Ajellomyces dermatitidis ER-3]
 gi|327354253|gb|EGE83110.1| WD domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
          Length = 515

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/273 (12%), Positives = 71/273 (26%), Gaps = 62/273 (22%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+G   ++  + D D     +        +    +SPN+Q +A  + D  + +R++   T
Sbjct: 162 VTGSGDSTARIWDCDTGTPLHTLKGHKSWVLAVSWSPNEQMIATGSMD--NTVRLWNPKT 219

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---------- 294
                    G+ +  I++  +          +QK     + S    S             
Sbjct: 220 GEALGGPLKGHTK-WIMSLAWEP------YHLQKPGLPRLASASKDSTVRIWDVVSKRID 272

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             LT          +    +  V+ S  +  + + +         +              
Sbjct: 273 TVLTGHKGSVTCVRWG--GTGRVYTSSHD--KTIKIWNPVDGSLLQTLSSHSHRVNHLAL 328

Query: 355 SPQ------------------------------------GDLIAFTKFSGEKFAIGVMKK 378
           S                                        +I     + + F + +   
Sbjct: 329 STDFVLRTSFFEHNENVPETEEGKVETAKRRFEKAATINNKIIERLVSASDDFTMFLWDP 388

Query: 379 DGSQ---ERLLVEDSNLQAPTWSPSGRSLIFSR 408
             S     RLL     +   T+SP G  +  + 
Sbjct: 389 ASSNKPVARLLGHQKEVNHVTFSPDGAYIASAS 421



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 57/139 (41%), Gaps = 9/139 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           + E +VS     ++ + D   +N          + +    FSP+   +A A++D+     
Sbjct: 370 IIERLVSASDDFTMFLWDPASSNKPVARLLGHQKEVNHVTFSPDGAYIASASFDN----H 425

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
           V L + R  +    +      +    FS++  R L+S  KD  + ++  D+++      L
Sbjct: 426 VKLWNARDGKFISSLRGHVGAVYQCCFSAD-SRLLVSSSKDTTLKVW--DVRTGKLFMDL 482

Query: 298 TNTLFINISASYSPDSSQI 316
              L    +  +SPD  ++
Sbjct: 483 PGHLDEVYAVDWSPDGEKV 501



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 38/131 (29%), Gaps = 6/131 (4%)

Query: 232 DDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L D      P  R+   +  +    FS +G     S   D  + +++    
Sbjct: 376 SASDDFTMFLWDPASSNKPVARLLGHQKEVNHVTFSPDGAYIA-SASFDNHVKLWNA-RD 433

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 L   +       +S DS  +V  S       L V                   +
Sbjct: 434 GKFISSLRGHVGAVYQCCFSADSRLLVSSSK---DTTLKVWDVRTGKLFMDLPGHLDEVY 490

Query: 351 DPVWSPQGDLI 361
              WSP G+ +
Sbjct: 491 AVDWSPDGEKV 501



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 40/132 (30%), Gaps = 4/132 (3%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++     +    RL          ++SPD + I   S       + +  
Sbjct: 374 LVSASDDFTMFLWDPASSNKPVARLLGHQKEVNHVTFSPDGAYIASASF---DNHVKLWN 430

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +         +    + +   +S    L+  +        +  ++       L      +
Sbjct: 431 ARDGKFISSLRGHVGAVYQCCFSADSRLLV-SSSKDTTLKVWDVRTGKLFMDLPGHLDEV 489

Query: 393 QAPTWSPSGRSL 404
            A  WSP G  +
Sbjct: 490 YAVDWSPDGEKV 501


>gi|226195326|ref|ZP_03790915.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
 gi|225932528|gb|EEH28526.1| conserved hypothetical protein [Burkholderia pseudomallei Pakistan
           9]
          Length = 411

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D + V +R +D    +        +   S+ 
Sbjct: 33  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYV-YR-FDTDSGRVSPVSSAKAENPSYL 90

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 91  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 148

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 149 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 208

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 209 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 242

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    I  +       
Sbjct: 243 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLAHIETVPMTAPGF 302

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 303 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 347


>gi|210076186|ref|XP_504170.2| YALI0E20031p [Yarrowia lipolytica]
 gi|199426943|emb|CAG79765.2| YALI0E20031p [Yarrowia lipolytica]
          Length = 324

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 75/231 (32%), Gaps = 27/231 (11%)

Query: 186 SGIIKNSLCVMD--RDGAN---IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           SG    SL V    RD  N    R        I+ +   S +       ++D      + 
Sbjct: 35  SGSRDKSLIVWSLTRDDTNYGVPRKSLKGHSHIVQDCAISHDGAYAISGSWDK----TLR 90

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI--------YSVDLQSN 292
           + D +   +  R       +L+  FS + ++ + S  +D  + I        Y++  + +
Sbjct: 91  VWDLKTGVSKDRFVGHTGDVLSVSFSPDNRQIV-SAGRDRTIKIWNTIGECKYTITDKGH 149

Query: 293 A--TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 +            SP+++ I+        +++ V   +    K           
Sbjct: 150 EDWVSTVRFNPATKDEEEPSPNANTII---SAGWDKKVKVWDLDTCTLKADHLGHTGYVS 206

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPS 400
               SP G L A    +G+  +I +     S     L     + A  +SP+
Sbjct: 207 TITISPDGSLCA---SAGKDGSILLWDLTSSTALYTLPAGDEVHAVCFSPN 254



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 47/122 (38%), Gaps = 12/122 (9%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T++   +I  S S D S IV+   R+         +N    ++  +       D   S  
Sbjct: 25  TSSNNPDILLSGSRDKSLIVWSLTRD--------DTNYGVPRKSLKGHSHIVQDCAISHD 76

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G   A +    +   +  +K   S++R +    ++ + ++SP  R ++       D   K
Sbjct: 77  GAY-AISGSWDKTLRVWDLKTGVSKDRFVGHTGDVLSVSFSPDNRQIV---SAGRDRTIK 132

Query: 418 LY 419
           ++
Sbjct: 133 IW 134



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 82/242 (33%), Gaps = 25/242 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    +L V D      +         +    FSP+ +++   +   +  ++++     
Sbjct: 82  SGSWDKTLRVWDLKTGVSKDRFVGHTGDVLSVSFSPDNRQI--VSAGRDRTIKIWNTIGE 139

Query: 246 IDRAPKRIGNFRSMILAPRF----------SSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                   G     +   RF          S N     IS   D+ + ++ +D  +   +
Sbjct: 140 CKYTITDKG-HEDWVSTVRFNPATKDEEEPSPNANTI-ISAGWDKKVKVWDLDTCTLKAD 197

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L +T +++   + SPD S         GK+   ++    S     +           +S
Sbjct: 198 HLGHTGYVST-ITISPDGSLCA----SAGKDGSILLWDLTSSTALYTLPAGDEVHAVCFS 252

Query: 356 PQGDLI-AFTKFSGEKFAI-GVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKK 410
           P    + A T  S + F +   +  D  + +   ED         TWS  G++L F+   
Sbjct: 253 PNRYWLCAATSSSIKVFDLEKRVLIDELKTQTTSEDGKEPEALSLTWSADGQNL-FAGYT 311

Query: 411 DG 412
           D 
Sbjct: 312 DN 313


>gi|125972529|ref|YP_001036439.1| YD repeat-containing protein [Clostridium thermocellum ATCC 27405]
 gi|125712754|gb|ABN51246.1| YD repeat containing protein [Clostridium thermocellum ATCC 27405]
          Length = 1942

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 19/178 (10%)

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---- 322
             +G         D A ++ S    +  T R T   F  +S    PD  +I F+ DR    
Sbjct: 1167 PDGTNIKY--DYDYAGNLVSTTDGNGNTTRYTYNSFNLLSEIIDPDGRKITFKYDRQGRM 1224

Query: 323  ------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                  +G+   Y   ++ +   R   ++E       ++  G L A    SG        
Sbjct: 1225 VQRIGKDGRSTYYNYNADNNITGR--WEEEGQMEKYEYNVDGSLAA--SISGTTIHTYAY 1280

Query: 377  KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               G  +        +    ++ +G   + S+  D       Y+ D+ GR  T+ N  
Sbjct: 1281 TLAGRLKSKTTNGQKVLEYDYNKNG---LVSKVTDISGTPVEYTYDVLGRLTTVTNGG 1335


>gi|134296510|ref|YP_001120245.1| 3-carboxymuconate cyclase-like protein [Burkholderia vietnamiensis
           G4]
 gi|134139667|gb|ABO55410.1| 3-carboxymuconate cyclase-like protein [Burkholderia vietnamiensis
           G4]
          Length = 415

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/252 (13%), Positives = 72/252 (28%), Gaps = 29/252 (11%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
              + F+      G     L +   DG   +Y+  +   +  +P          +   D 
Sbjct: 130 TGTLTFIDRVSSEGNDPCYLALS-PDG---KYVVTANYSVAADP----GGSFAVFPVRDG 181

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-N 292
             +    L        P +     + + +  FS +G+   +     + +  Y   +    
Sbjct: 182 GAVGTAVLTVHHEGTGPVKGRQDGAHVHSTVFSPDGRYLFVQDLGADKIYGYRYTVDGSR 241

Query: 293 ATERLTNTLFINISA-------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--- 342
                T+T +  +          +  D       S+     +++          +     
Sbjct: 242 GLISPTDTRYTPVKPGSGPRHMVFGADGRFAYVTSELNASVEVFGYHDGKLTPVQTLPMS 301

Query: 343 ---QDKEASYFDPVWSPQGDLIAFTKFSGEKFAI---GVMKKDGSQERLLVEDSNLQAPT 396
                 +        SP G  + +    G+   I    V + DG  + +  + S  + P 
Sbjct: 302 APGFKGKVGGGAIHVSPDGRFV-YASNRGDANDIVIYAVNQADGRLKTVGRQSSLGKTPR 360

Query: 397 ---WSPSGRSLI 405
                PSG+ LI
Sbjct: 361 EFLIDPSGKWLI 372


>gi|328789414|ref|XP_624420.2| PREDICTED: POC1 centriolar protein homolog B-like [Apis mellifera]
          Length = 447

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/261 (12%), Positives = 88/261 (33%), Gaps = 18/261 (6%)

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVV--SGIIKNSLCVMDRDGANIRYLTPSRD 211
           +  T  D   +       +  + + F  E+    S     S+ + +   +   Y      
Sbjct: 1   MIETACDPTIEKHFKGHENIITSLCFHPETTQLASSSSDKSIILWNLKESVRAYRFFGHK 60

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            ++F+  ++P+ + +A A+ D      V +   ++             + + +FS +G++
Sbjct: 61  DVIFDVTYAPSGEVIATASRDR----SVIIWVPKVTGQSLDFKAHSGAVRSVQFSPDGEK 116

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDREGKEQL 328
             I+   D+++ ++ V         L +          A +S D   IV  SD    + +
Sbjct: 117 L-ITASDDKSVKLWMV----CQRRFLMSFVCHTSWVRCARFSLDGRLIVSCSD---DKTI 168

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +         +   D +A      + P G  +  +  +     +  ++     +     
Sbjct: 169 KLWDVISGQCIKSFNDVKAYSTHVEFHPSG-YVIGSANTIGCVKLYDIRTGSLYQHYATH 227

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
             ++    + P G  ++ +  
Sbjct: 228 KGSVNMIKFHPKGNFILTASD 248



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 45/280 (16%), Positives = 92/280 (32%), Gaps = 26/280 (9%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           +L      K II      S  ++R   H   D I+       G+          +  S  
Sbjct: 32  QLASSSSDKSIILWNLKESVRAYRFFGHK--DVIFDVTYAPSGE--------VIATASRD 81

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               + V    G ++ +   S      +  FSP+ +K+  A+ D      V L      R
Sbjct: 82  RSVIIWVPKVTGQSLDFKAHSGAVRSVQ--FSPDGEKLITASDDK----SVKLWMVCQRR 135

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                    S +   RFS +G R ++S   D+ + ++ V +     +   +    +    
Sbjct: 136 FLMSFVCHTSWVRCARFSLDG-RLIVSCSDDKTIKLWDV-ISGQCIKSFNDVKAYSTHVE 193

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + P    ++  ++  G  +LY          +     + S     + P+G+ I       
Sbjct: 194 FHPSG-YVIGSANTIGCVKLY--DIRTGSLYQHYATHKGSVNMIKFHPKGNFILTASDDS 250

Query: 369 EKFAIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLI 405
               + +   +G     L      +++ + T+S +G    
Sbjct: 251 TMKVLDL--LEGRPIYTLKGHANGTSVTSVTFSSNGEFFA 288



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 45/122 (36%), Gaps = 7/122 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              I  S  + P+++Q+   S     + + +     S +       +   FD  ++P G+
Sbjct: 17  HENIITSLCFHPETTQLASSSS---DKSIILWNLKESVRAYRFFGHKDVIFDVTYAPSGE 73

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +IA          I V K  G           +++  +SP G  LI +     D   KL+
Sbjct: 74  VIATASRD-RSVIIWVPKVTGQSLDFKAHSGAVRSVQFSPDGEKLITASD---DKSVKLW 129

Query: 420 SI 421
            +
Sbjct: 130 MV 131


>gi|288934694|ref|YP_003438753.1| hypothetical protein Kvar_1820 [Klebsiella variicola At-22]
 gi|288889403|gb|ADC57721.1| hypothetical protein Kvar_1820 [Klebsiella variicola At-22]
          Length = 702

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 27/73 (36%), Gaps = 10/73 (13%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---- 322
            +      S +K+    I+  D  +    R+TNT           D  +++++SDR    
Sbjct: 327 PD--YIAFSEEKEGYEQIFLFDRDTGQQVRVTNTSSNETLPRV--DGDKVIWQSDRETNR 382

Query: 323 --EGKEQLYVMQS 333
              G+   Y+   
Sbjct: 383 APGGQYYCYINDL 395


>gi|227539999|ref|ZP_03970048.1| peptidase, S9A/B/C family, catalytic domain protein
           [Sphingobacterium spiritivorum ATCC 33300]
 gi|227240277|gb|EEI90292.1| peptidase, S9A/B/C family, catalytic domain protein
           [Sphingobacterium spiritivorum ATCC 33300]
          Length = 795

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 56/153 (36%), Gaps = 12/153 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISA-SYSPDSSQIVFES 320
            FS + K    +    + ++++ +DL +   ++LT+        S  S+  DS  ++   
Sbjct: 120 SFSPDRKTLAFTNTTAKGVELWVIDLATAQAKKLTSDNLNANLGSPYSWYRDSKSLLINV 179

Query: 321 DREGKEQLY--VMQSNGSDQKRISQDK---EASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
               +  L               S  K     +Y D + +P  D   F   +     +  
Sbjct: 180 LPANRPALLDEKKDLPTGPTVSTSDGKVSQNRTYQDLLKNP-KDEANFENLASS--ELFK 236

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           +  +G+  +     +   + ++SP G+ ++ + 
Sbjct: 237 VDLNGAATK-FKNAAIYTSTSFSPDGKYIMLTT 268



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 56/157 (35%), Gaps = 27/157 (17%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDP-VWSPQGDLIA 362
            + S+SPD   + F +      +L+V+    +  K+++ D   A+   P  W      + 
Sbjct: 117 TNLSFSPDRKTLAFTNTTAKGVELWVIDLATAQAKKLTSDNLNANLGSPYSWYRDSKSLL 176

Query: 363 FTKFSGEKFAI-----------GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                  + A+            V   DG   +       L+ P               +
Sbjct: 177 INVLPANRPALLDEKKDLPTGPTVSTSDGKVSQNRTYQDLLKNPK---DE------ANFE 227

Query: 412 GDTGSKLYSIDLNG-----RNETLINTPAYASDPQWV 443
               S+L+ +DLNG     +N  +  + +++ D +++
Sbjct: 228 NLASSELFKVDLNGAATKFKNAAIYTSTSFSPDGKYI 264


>gi|124009903|ref|ZP_01694569.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
 gi|123984054|gb|EAY24427.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
          Length = 604

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/235 (18%), Positives = 85/235 (36%), Gaps = 23/235 (9%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +        + + R S     +A AT  +   LR    + +I        N+  M L 
Sbjct: 27  PFHTIKGYKGFILDARLSAKNTYLAVATNQNRVELRNQSFE-KIWSYQNNPANY-GMNLC 84

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERL-TNTLFINISASYSPDSSQIVFES 320
             F+ N K  + S  +    D+  +D+      ++L T    I     YSPD   ++   
Sbjct: 85  --FAPNEKHLVFSKYQS-FRDVGVLDITQKKIVQKLKTGGAAIV---QYSPDGQFLITAG 138

Query: 321 ----DREGKEQLYVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                R G  +++  +    + ++       +  ++    +SP G   A           
Sbjct: 139 RARQSRTGIIKVWQWKGKQFELQQSFPYQHKRFQNFRSIAFSPNGQYFALLGTMANVLVY 198

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              KK  S  +L+ + S  +   + P+G+ L F  +      +KLYS+ L+   +
Sbjct: 199 KRRKKKFSFFQLIPQRSWTRGIAFHPNGKYLAFGTR------NKLYSLRLDKNKQ 247


>gi|14042835|dbj|BAB55412.1| unnamed protein product [Homo sapiens]
          Length = 504

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 59/307 (19%), Positives = 108/307 (35%), Gaps = 50/307 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 228 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 276

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 277 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 318

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 319 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 370

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+    
Sbjct: 371 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQTFSA 425

Query: 345 KE----ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWS 398
                 + +   V+SP G  +A     G  +   V    G  E++L     S++ A  WS
Sbjct: 426 TGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAWS 483

Query: 399 PSGRSLI 405
           PSG  ++
Sbjct: 484 PSGSHVV 490


>gi|329925315|ref|ZP_08280256.1| putative lipoprotein [Paenibacillus sp. HGF5]
 gi|328939923|gb|EGG36258.1| putative lipoprotein [Paenibacillus sp. HGF5]
          Length = 379

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 68/207 (32%), Gaps = 22/207 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---- 264
           +++    EP +S N + V+Y   +         +         R+   + +         
Sbjct: 156 NQELWFEEPAWSGNSRFVSYMVMESNKRQSSIGIY-DTQEESARVYRLKGLETEALPLKV 214

Query: 265 -FSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESD 321
             S +GK  LI + +       ++   +  T   +  + +  +  A++  D  Q VF   
Sbjct: 215 IVSDDGKMVLIVLDEYGHGRRIAMGAVNGNTIDVQYEHEIGAD-QAAWLND-DQFVFLGT 272

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 LYV      +   + +  ++  F    S     +A++     +  I   K  G 
Sbjct: 273 EG---TLYVYDRRNHELSILLEKVDSFEF----SQDRKYVAYS--QNGEDTIYAGKLQGK 323

Query: 382 QERLLVEDSNLQAPT---WSPSGRSLI 405
                    +   P+   WSP  R L+
Sbjct: 324 NVLSAEPIYHGVIPSKMYWSPDHRRLL 350


>gi|325109620|ref|YP_004270688.1| hypothetical protein Plabr_3069 [Planctomyces brasiliensis DSM
           5305]
 gi|324969888|gb|ADY60666.1| WD40 repeat-containing protein [Planctomyces brasiliensis DSM 5305]
          Length = 468

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 58/188 (30%), Gaps = 35/188 (18%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+++ VA           V L  T        I      + A  FS +GK  + +  +
Sbjct: 266 ISPDEKLVAIGLTSR----LVKLYSTEDGSLVTTIDKHTDWVTAVAFSPDGKYLV-TGDR 320

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              + ++  D +S      L+       + S+  DS  +   S  E    ++    +G  
Sbjct: 321 IGNIHLW--DGKSGGVILPLSEHKNSVRALSWRSDSGVVA--SCGEDGNVIWWDVKDGWP 376

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            +  S        D  + P G              +    +DG  +             W
Sbjct: 377 VENKSNAHPGGALDCQFGPNGK-------------LATCGRDGRVKI------------W 411

Query: 398 SPSGRSLI 405
           SP G+ L 
Sbjct: 412 SPDGKELA 419


>gi|296215921|ref|XP_002754338.1| PREDICTED: WD repeat-containing protein 20 isoform 2 [Callithrix
           jacchus]
          Length = 508

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 63/227 (27%), Gaps = 32/227 (14%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKN-------SLCV 195
           +F +    ++ + H+      +     +G    R+ FV+ +  SG            L  
Sbjct: 16  QFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYF 75

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
               G   R +  SR   +   ++ P  + +    +   ++    +  T    AP     
Sbjct: 76  YIYKGVRKRLIDKSRVTCV---KWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLL 132

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +                +   K ++     +        + T         ++SPD   
Sbjct: 133 KQGESF-----------AVHTCKSKSTRNPLL--------KWTVGEGALNEFAFSPDGKF 173

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +   S       L V   +  +     +          WSP G  I 
Sbjct: 174 LACVSQ---DGFLRVFSFDSVELHGTMKSYFGGLLCVCWSPDGKYIV 217



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 60/212 (28%), Gaps = 44/212 (20%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRF------SSNGKRALISVQKDEA 281
             +   + L   L  +   R  +   N +    +   F      S NG R   +V ++  
Sbjct: 15  TQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELY 74

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM---------- 331
             IY         +RL +         + P S  +   +   G   LY +          
Sbjct: 75  FYIYK-----GVRKRLID-KSRVTCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPH 128

Query: 332 ----------------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                             +  +        E +  +  +SP G  +A     G    + V
Sbjct: 129 YQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDG---FLRV 185

Query: 376 MKKDGSQERLLVED--SNLQAPTWSPSGRSLI 405
              D  +    ++     L    WSP G+ ++
Sbjct: 186 FSFDSVELHGTMKSYFGGLLCVCWSPDGKYIV 217


>gi|290984207|ref|XP_002674819.1| predicted protein [Naegleria gruberi]
 gi|284088411|gb|EFC42075.1| predicted protein [Naegleria gruberi]
          Length = 678

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 51/139 (36%), Gaps = 14/139 (10%)

Query: 176 RILFVSESVVSGII--KNSLCVMDRDGANIRYLT-PSRDQILFEPRFSPNQQKVAYATYD 232
           R++FV E  V+G    +NS+  +       + +T  S       P+ S +  K+AY  ++
Sbjct: 156 RLVFVQEEHVTGEKEPRNSVITLSTKSNEEKSITLASGMDFYAAPKVSRDGSKLAYIAWN 215

Query: 233 DE----DILRVYLMDTRIDRAPKRIGNFRSMIL------APRFSSNGKRALISVQ-KDEA 281
                 D   ++++D   D  P      +  +        P FS +GK            
Sbjct: 216 HPNMQWDNSAIFMVDLDKDSKPIESTRRKISLSEEESCNEPLFSPDGKFLFYITDFPTGY 275

Query: 282 MDIYSVDLQSNATERLTNT 300
             +    L+S  TE L   
Sbjct: 276 WSLVRYSLESGKTENLMTH 294



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 81/229 (35%), Gaps = 32/229 (13%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           K  +  +    I                +   +S +    F     +AL+ V   E+ DI
Sbjct: 76  KDLFPDFKTSPIFYSARTRVHEYGGLSHVITSKSDVYFSNFR---DQALMKVNLKESSDI 132

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVF------ESDREGKEQLYVMQSNGSDQ 338
             V L  NA+ R  +     +         ++VF        ++E +  +  + +  +++
Sbjct: 133 VMVSLSENASVRFGDGFVDEVR-------ERLVFVQEEHVTGEKEPRNSVITLSTKSNEE 185

Query: 339 KRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKD--------GSQER 384
           K I+       Y  P  S  G  +A+  ++          I ++  D          ++ 
Sbjct: 186 KSITLASGMDFYAAPKVSRDGSKLAYIAWNHPNMQWDNSAIFMVDLDKDSKPIESTRRKI 245

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLNGRNETLIN 432
            L E+ +   P +SP G+ L +      G      YS++ +G+ E L+ 
Sbjct: 246 SLSEEESCNEPLFSPDGKFLFYITDFPTGYWSLVRYSLE-SGKTENLMT 293


>gi|195377672|ref|XP_002047612.1| GJ11835 [Drosophila virilis]
 gi|194154770|gb|EDW69954.1| GJ11835 [Drosophila virilis]
          Length = 641

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 59/143 (41%), Gaps = 9/143 (6%)

Query: 199 DGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           DG  ++ +         ++  +FSP+  K+A  + D   I+          +  + +   
Sbjct: 311 DGFPMQTIQVLTDHCDEVWFCKFSPDGLKLATGSKDSTVIIWDVDPYKLTLKHRRVLDGQ 370

Query: 257 RSMILA-PRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDS 313
             + ++   +S + K  L+   +D   + I++VD       + + +   +++  ++S D 
Sbjct: 371 AQLNVSFVSWSPDSKLILVGGTEDSHELFIWNVD-DGKLVVKFSQSPDDSLACGTFSRDG 429

Query: 314 SQIVFESDREGKEQLYVMQSNGS 336
           +  V       K QLY+   NG+
Sbjct: 430 NHFVCG---GQKGQLYLCDLNGT 449



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 67/163 (41%), Gaps = 11/163 (6%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLF-IN 304
           +  + + +    +   +FS +G +   +  KD  + I+ VD    +    R+ +    +N
Sbjct: 316 QTIQVLTDHCDEVWFCKFSPDGLKLA-TGSKDSTVIIWDVDPYKLTLKHRRVLDGQAQLN 374

Query: 305 ISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIA 362
           +S  S+SPDS +++     E   +L++   +      + SQ  + S     +S  G+   
Sbjct: 375 VSFVSWSPDS-KLILVGGTEDSHELFIWNVDDGKLVVKFSQSPDDSLACGTFSRDGNHFV 433

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                G+K  + +   +G+      E   + +  +    ++++
Sbjct: 434 ---CGGQKGQLYLCDLNGTLIDSW-EGVRVNSVAFRADNKTIL 472


>gi|115465309|ref|NP_001056254.1| Os05g0552300 [Oryza sativa Japonica Group]
 gi|75324250|sp|Q6L4F8|GBLPB_ORYSJ RecName: Full=Guanine nucleotide-binding protein subunit beta-like
           protein B; Short=GPB-LR; AltName: Full=Receptor for
           activated C kinase 1B
 gi|47900542|gb|AAT39277.1| putative guanine nucleotide-binding protein beta subunit [Oryza
           sativa Japonica Group]
 gi|50878418|gb|AAT85192.1| putative guanine nucleotide binding protein beta subunit [Oryza
           sativa Japonica Group]
 gi|113579805|dbj|BAF18168.1| Os05g0552300 [Oryza sativa Japonica Group]
 gi|215692796|dbj|BAG88240.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694426|dbj|BAG89443.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215768325|dbj|BAH00554.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222632483|gb|EEE64615.1| hypothetical protein OsJ_19467 [Oryza sativa Japonica Group]
          Length = 336

 Score = 47.3 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/266 (12%), Positives = 84/266 (31%), Gaps = 30/266 (11%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                 E RLWD+   +    ++F         +A ++               ++R +  
Sbjct: 93  SGSWDGELRLWDLATGR--TTRRFVGHTKDVLSVAFSV---------------DNRQIVS 135

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +    +  + N+L                    +   RFSPN       +   +  ++V+
Sbjct: 136 AARDNTIKLWNTLGECKYTIGGDHGAGEGHTGWVSCVRFSPNPMAPTIVSGSWDRSVKVW 195

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +    +   ++      + A   S +G     S  KD    ++ +  +     +L + 
Sbjct: 196 --NLTNCKLRTKLEGHNGYVNAVAVSPDGSLCA-SGGKDGTTLLWDL-TEGKMLYKL-DA 250

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLY-----VMQSNGSDQKRISQDKEASYFDPVWS 355
             I  S  +SP+  +    +  E   +++     ++  +   + +  + +        WS
Sbjct: 251 GAIIHSLCFSPN--RYWLCAATEDSVKIWDLESKLVMQDLKPEVQAFKSQMLYCTSLSWS 308

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G  + F  ++     +  +   G 
Sbjct: 309 ADGSTL-FAGYTDGTIRVWKVSGFGG 333


>gi|332018767|gb|EGI59332.1| Fizzy-related protein-like protein [Acromyrmex echinatior]
          Length = 494

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 73/247 (29%), Gaps = 33/247 (13%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR---------FSPNQQK 225
           SRI F             L ++D    N+  +       L+             S +   
Sbjct: 173 SRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSSDGNS 232

Query: 226 VAYATYDDEDIL--------RVYLMDTRIDRAPKRIGNFRSMILAPRFS----SNGKRAL 273
           V    +++   L         + + D  +++   ++    + + A  ++    S+G R  
Sbjct: 233 VTSVAWNERGNLVAVGTHMGYIQVWDVAVNKQVSKLQGHSARVGALAWNGEVLSSGSRDR 292

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQ 332
           + +Q+D                RL           +SPD+  +       G   +LYV  
Sbjct: 293 LILQRDVRTPCIV------GERRLGAHRQEVCGLKWSPDNQYLA----SGGNDNRLYVWN 342

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSN 391
            +     +   +  A+     WSP    +  +        I       G   + +   S 
Sbjct: 343 LHSLSPIQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQ 402

Query: 392 LQAPTWS 398
           +    WS
Sbjct: 403 VCNLAWS 409



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 5/145 (3%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           ++SP+ Q +A       +  R+Y+ +       +      + + A  +S +    L S  
Sbjct: 321 KWSPDNQYLA----SGGNDNRLYVWNLHSLSPIQTYTEHLAAVKAIAWSPHHHGLLASGG 376

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 I   +  +    +  +T     + ++S  SS++V  +    + Q+ V +     
Sbjct: 377 GTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELV-STHGYSQNQILVWKYPSLT 435

Query: 338 QKRISQDKEASYFDPVWSPQGDLIA 362
           Q                SP G+ I 
Sbjct: 436 QVAKLTGHSYRVLYLAMSPDGEAIV 460


>gi|317148526|ref|XP_001822546.2| catabolite degradation protein [Aspergillus oryzae RIB40]
          Length = 924

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 8/142 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G + +          +   D  +     +L         A +SPD S+++  S   
Sbjct: 614 FSHDGTKLV---TAGRDHSVIIYDTSTFAVLHKLMEHDDGVAHACWSPDDSKLITCSQ-- 668

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             ++  V   +                   W+  GD         +   +      G   
Sbjct: 669 -DKKARVWSVDTGRCLLTINHHRQPVTAAAWAADGDSFVTASLDKDS-HLCHWSMRGHAL 726

Query: 384 RLLVEDSNLQAPTWSPSGRSLI 405
            +   D  +Q    +P GR LI
Sbjct: 727 HMWQGDFRVQDCAITPDGRRLI 748



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 68/205 (33%), Gaps = 16/205 (7%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI-------YQSITGEKGD 172
             +RL +   L D   + QI    + ++       +  + D          +        
Sbjct: 553 PDNRLAI---LLDHVKQNQINQCLYHNTATPPSLYSDHMCDRADFPSRPGIELSQHSDEV 609

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +  +       +V+    +S+ + D     + +     D  +    +SP+  K+   + D
Sbjct: 610 WYCQFSHDGTKLVTAGRDHSVIIYDTSTFAVLHKLMEHDDGVAHACWSPDDSKLITCSQD 669

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +      +      R    I + R  + A  ++++G    ++   D+   +    ++ +
Sbjct: 670 KK----ARVWSVDTGRCLLTINHHRQPVTAAAWAADGDS-FVTASLDKDSHLCHWSMRGH 724

Query: 293 ATERLTNTLFINISASYSPDSSQIV 317
           A        F     + +PD  +++
Sbjct: 725 ALHMW-QGDFRVQDCAITPDGRRLI 748


>gi|299138359|ref|ZP_07031538.1| SMP-30/Gluconolaconase/LRE domain protein [Acidobacterium sp.
           MP5ACTX8]
 gi|298599605|gb|EFI55764.1| SMP-30/Gluconolaconase/LRE domain protein [Acidobacterium sp.
           MP5ACTX8]
          Length = 348

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 79/259 (30%), Gaps = 19/259 (7%)

Query: 183 SVVSGIIKNSLCVMDRDG-------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
            V  G I + L V  RDG       ANI         ++  P    +    A  +    +
Sbjct: 68  RVPEGAIASDL-VFHRDGLTSNILHANIAIPMAENLHLVSNPAVDADGNLFAMVSGPRGE 126

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
            + V +     D   +        + A  F  +G     S + +  +   S      A  
Sbjct: 127 RVPVSIFRIDRDLQVRPFVRDLMNVSALAFDGDG-HLYASSRAEGTVYRIS---PHGAIS 182

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                + I    ++  + S  +F  DR G   ++ +          + +   + +   + 
Sbjct: 183 TFAEGMGIATGIAFDREGS--LFVGDRSGT--IFKINREREIFVFATLEPSVAAYHLAFR 238

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
             G L+     +    +I  +   G+           Q   +   G  L  +    G  G
Sbjct: 239 DDGVLLVTAPTTSSNQSIHAIDPQGNATVFYRGLGRPQGMAFDVDGN-LYVAASLHGRRG 297

Query: 416 SKLYSIDLNGRNETLINTP 434
             +  I+ + + E +++  
Sbjct: 298 --IVKINHDRQAELIVSGN 314


>gi|269217755|ref|ZP_06161609.1| protease II [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269212690|gb|EEZ79030.1| protease II [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 798

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 41/123 (33%), Gaps = 8/123 (6%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG- 368
           SPD        D  G E   +   +      +    +   +   W+     I +++    
Sbjct: 188 SPDGRLGALGVDFTGDEHFRLRVFDVETGAVVDDAVDGLGYGLAWTADSKAIVYSRVDDS 247

Query: 369 -EKFAIGVMKKD--GSQERLLV--EDSNLQAPTW-SPSGRSLIFSRKKDGDTGSKLYSI- 421
             ++ I + +      ++RLL    D       W S  GR ++          + LY + 
Sbjct: 248 WRQWQIWLHRVGSPTWEDRLLFQENDGRFNVGHWASRDGRWIVVHSSSSSTAEALLYDVA 307

Query: 422 DLN 424
           D++
Sbjct: 308 DID 310


>gi|168180815|ref|ZP_02615479.1| hypothetical protein CBN_2747 [Clostridium botulinum NCTC 2916]
 gi|226950190|ref|YP_002805281.1| hypothetical protein CLM_3144 [Clostridium botulinum A2 str. Kyoto]
 gi|182668372|gb|EDT80351.1| hypothetical protein CBN_2747 [Clostridium botulinum NCTC 2916]
 gi|226842821|gb|ACO85487.1| hypothetical protein CLM_3144 [Clostridium botulinum A2 str. Kyoto]
          Length = 429

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 81/221 (36%), Gaps = 28/221 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  +  Y   D      +  ++       K   +F S I       NG+       +   
Sbjct: 111 SGNEKIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNIW-----INGQWLYYINYRGGN 165

Query: 282 MD--IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQLYVMQSN 334
            +  +Y +    ++ ERLT+T  I+ S  +S +    +F      S  +   ++Y ++ +
Sbjct: 166 EENCLYRIKKDGSSRERLTDTT-ID-SLVFSDN---YIFYSEYISSSSKDNYKIYRIKKD 220

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           GS +  +S  +  +         G  + +       ++I  ++ DG   + +   S+   
Sbjct: 221 GSSKIALSNVRGINLIIQ-----GPFLYYLNIED-NYSIYRIRVDGLDMKKINNYSSRNF 274

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                 G  + +    + + G+ LY   L+G  E  +N  +
Sbjct: 275 MRI-KDG-WIYYI---NEELGNNLYRTTLDGNYEEKLNNDS 310



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 78/190 (41%), Gaps = 31/190 (16%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--L 328
           +    +  +   +I  ++L  +   +L +    NI   +  +   + + + R G E+  L
Sbjct: 115 KIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNI---WI-NGQWLYYINYRGGNEENCL 170

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQER 384
           Y ++ +GS ++R++   + +    V+S     I ++      S + + I  +KKDGS + 
Sbjct: 171 YRIKKDGSSRERLT---DTTIDSLVFSDN--YIFYSEYISSSSKDNYKIYRIKKDGSSKI 225

Query: 385 LLVEDSNLQAPTWSPSGRSLI---FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            L     +           +I   F    + +    +Y I ++G +   IN  +  +  +
Sbjct: 226 ALSNVRGIN---------LIIQGPFLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMR 276

Query: 442 ----WVGFMD 447
               W+ +++
Sbjct: 277 IKDGWIYYIN 286


>gi|153938280|ref|YP_001392056.1| hypothetical protein CLI_2828 [Clostridium botulinum F str.
           Langeland]
 gi|152934176|gb|ABS39674.1| hypothetical protein CLI_2828 [Clostridium botulinum F str.
           Langeland]
 gi|295320068|gb|ADG00446.1| hypothetical protein CBF_2820 [Clostridium botulinum F str. 230613]
          Length = 429

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 81/221 (36%), Gaps = 28/221 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  +  Y   D      +  ++       K   +F S I       NG+       +   
Sbjct: 111 SGNEKIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNIW-----INGQWLYYINYRGGN 165

Query: 282 MD--IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQLYVMQSN 334
            +  +Y +    ++ ERLT+T  I+ S  +S +    +F      S  +   ++Y ++ +
Sbjct: 166 EENCLYRIKKDGSSRERLTDTT-ID-SLVFSDN---YIFYSEYISSSSKDNYKIYRIKKD 220

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           GS +  +S  +  +         G  + +       ++I  ++ DG   + +   S+   
Sbjct: 221 GSSKIALSNVRGINLIIQ-----GPFLYYLNIED-NYSIYRIRVDGLDMKKINNYSSRNF 274

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                 G  + +    + + G+ LY   L+G  E  +N  +
Sbjct: 275 MRI-KDG-WIYYI---NEELGNNLYRTTLDGNYEEKLNNDS 310



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 78/190 (41%), Gaps = 31/190 (16%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--L 328
           +    +  +   +I  ++L  +   +L +    NI   +  +   + + + R G E+  L
Sbjct: 115 KIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNI---WI-NGQWLYYINYRGGNEENCL 170

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQER 384
           Y ++ +GS ++R++   + +    V+S     I ++      S + + I  +KKDGS + 
Sbjct: 171 YRIKKDGSSRERLT---DTTIDSLVFSDN--YIFYSEYISSSSKDNYKIYRIKKDGSSKI 225

Query: 385 LLVEDSNLQAPTWSPSGRSLI---FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            L     +           +I   F    + +    +Y I ++G +   IN  +  +  +
Sbjct: 226 ALSNVRGIN---------LIIQGPFLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMR 276

Query: 442 ----WVGFMD 447
               W+ +++
Sbjct: 277 IKDGWIYYIN 286


>gi|148380736|ref|YP_001255277.1| hypothetical protein CBO2776 [Clostridium botulinum A str. ATCC
           3502]
 gi|153931166|ref|YP_001385020.1| hypothetical protein CLB_2719 [Clostridium botulinum A str. ATCC
           19397]
 gi|153937452|ref|YP_001388490.1| hypothetical protein CLC_2652 [Clostridium botulinum A str. Hall]
 gi|148290220|emb|CAL84339.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152927210|gb|ABS32710.1| hypothetical protein CLB_2719 [Clostridium botulinum A str. ATCC
           19397]
 gi|152933366|gb|ABS38865.1| hypothetical protein CLC_2652 [Clostridium botulinum A str. Hall]
          Length = 429

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 81/221 (36%), Gaps = 28/221 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  +  Y   D      +  ++       K   +F S I       NG+       +   
Sbjct: 111 SGNEKIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNIW-----INGQWLYYINYRGGN 165

Query: 282 MD--IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQLYVMQSN 334
            +  +Y +    ++ ERLT+T  I+ S  +S +    +F      S  +   ++Y ++ +
Sbjct: 166 EENCLYRIKKDGSSRERLTDTT-ID-SLVFSDN---YIFYSEYISSSSKDNYKIYRIKKD 220

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           GS +  +S  +  +         G  + +       ++I  ++ DG   + +   S+   
Sbjct: 221 GSSKIALSNVRGINLIIQ-----GPFLYYLNIED-NYSIYRIRVDGLDMKKINNYSSRNF 274

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                 G  + +    + + G+ LY   L+G  E  +N  +
Sbjct: 275 MRI-KDG-WIYYI---NEELGNNLYRTTLDGNYEEKLNNDS 310



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 78/190 (41%), Gaps = 31/190 (16%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--L 328
           +    +  +   +I  ++L  +   +L +    NI   +  +   + + + R G E+  L
Sbjct: 115 KIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNI---WI-NGQWLYYINYRGGNEENCL 170

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQER 384
           Y ++ +GS ++R++   + +    V+S     I ++      S + + I  +KKDGS + 
Sbjct: 171 YRIKKDGSSRERLT---DTTIDSLVFSDN--YIFYSEYISSSSKDNYKIYRIKKDGSSKI 225

Query: 385 LLVEDSNLQAPTWSPSGRSLI---FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            L     +           +I   F    + +    +Y I ++G +   IN  +  +  +
Sbjct: 226 ALSNVRGIN---------LIIQGPFLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMR 276

Query: 442 ----WVGFMD 447
               W+ +++
Sbjct: 277 IKDGWIYYIN 286


>gi|126339612|ref|XP_001365091.1| PREDICTED: similar to apoptotic peptidase activating factor 1 isoform
            4 [Monodelphis domestica]
          Length = 1198

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 85/241 (35%), Gaps = 33/241 (13%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR----IDRAPKRIGNFRSMILAPR 264
              ++ +   +F+P+ + +  ++ D    ++V+   +     +    + + +FR +     
Sbjct: 950  GHEKAVRRVQFTPDGRTLISSSDD--STVQVWNWQSEEFVFLKAHQEPVKDFRLLQ---- 1003

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
                    L++   D  + ++++ L     +  T      +S   SP++++    S    
Sbjct: 1004 -----NSRLLTWSFDGTVKVWNI-LTGKVEKDFTCHQGTVLSCDVSPNATKF---SSTSA 1054

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---- 380
             +   +     S      +  E      V+S    L+A T     +  I  +   G    
Sbjct: 1055 DKTAKIWNFESSFPLHELRGHEGCVRCSVFSGDNALLA-TGDDNGEIRIWSVSSGGLLHS 1113

Query: 381  -----SQERLLVEDSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRNETLI 431
                  +E        +    +SP GR L+    + +  D DTG  L +   NG N   I
Sbjct: 1114 CLPLTVEEGEATYGGWVTDLHFSPDGRMLVSAGGYLKWWDVDTGESLQTFYTNGTNLKTI 1173

Query: 432  N 432
            +
Sbjct: 1174 H 1174



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 71/197 (36%), Gaps = 23/197 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S +  ++  A  +     R+ L +T             S +    FS +G    ++  
Sbjct: 794 SWSNDGARLMAAAAN-----RLLLWNTDTGLKVADCRGHLSWVHCVAFSPDGSS-FLTSS 847

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFI----NISASYSPDSSQIVFESDREGKEQLYVMQS 333
            D+ + ++        T ++     I     +  ++  D   +V   D     +L ++  
Sbjct: 848 DDQTIRLW-------ETRKVCKNSAIMLKQEVDVAF-RDDEVMVLAIDNI--RRLQLING 897

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNL 392
                  +++  ++       SP    +AF +  G    + +   +G + R  +  +  +
Sbjct: 898 KTGHTDYLTEAHKSRISCCCLSPGLRFVAFGEEDGSIKILEL--PNGREFRSRIGHEKAV 955

Query: 393 QAPTWSPSGRSLIFSRK 409
           +   ++P GR+LI S  
Sbjct: 956 RRVQFTPDGRTLISSSD 972


>gi|126339606|ref|XP_001364873.1| PREDICTED: similar to apoptotic peptidase activating factor 1 isoform
            1 [Monodelphis domestica]
          Length = 1251

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 85/241 (35%), Gaps = 33/241 (13%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR----IDRAPKRIGNFRSMILAPR 264
              ++ +   +F+P+ + +  ++ D    ++V+   +     +    + + +FR +     
Sbjct: 1003 GHEKAVRRVQFTPDGRTLISSSDD--STVQVWNWQSEEFVFLKAHQEPVKDFRLLQ---- 1056

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
                    L++   D  + ++++ L     +  T      +S   SP++++    S    
Sbjct: 1057 -----NSRLLTWSFDGTVKVWNI-LTGKVEKDFTCHQGTVLSCDVSPNATKF---SSTSA 1107

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---- 380
             +   +     S      +  E      V+S    L+A T     +  I  +   G    
Sbjct: 1108 DKTAKIWNFESSFPLHELRGHEGCVRCSVFSGDNALLA-TGDDNGEIRIWSVSSGGLLHS 1166

Query: 381  -----SQERLLVEDSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRNETLI 431
                  +E        +    +SP GR L+    + +  D DTG  L +   NG N   I
Sbjct: 1167 CLPLTVEEGEATYGGWVTDLHFSPDGRMLVSAGGYLKWWDVDTGESLQTFYTNGTNLKTI 1226

Query: 432  N 432
            +
Sbjct: 1227 H 1227



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 93/291 (31%), Gaps = 40/291 (13%)

Query: 128  FRLWDVKDRKQ---IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
             +LWDV    +   I  K+ F +    +        D+         D    +   +   
Sbjct: 766  LKLWDVSSANECSSIDVKQHFLTGDGRQD-----DVDVVVKCCSWSNDGARLMAAAA--- 817

Query: 185  VSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                  N L V D    N+   +  S    +    F P     A A         V L +
Sbjct: 818  ------NRLLVFDVQSRNLLGEIHTSHSSTIRFCDFFPKSHLAAVALSH----YCVELWN 867

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            T             S +    FS +G    ++   D+ + ++        T ++     I
Sbjct: 868  TDTGLKVADCRGHLSWVHCVAFSPDGSS-FLTSSDDQTIRLW-------ETRKVCKNSAI 919

Query: 304  ----NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 +  ++  D   +V   D     +L ++         +++  ++       SP   
Sbjct: 920  MLKQEVDVAF-RDDEVMVLAIDNI--RRLQLINGKTGHTDYLTEAHKSRISCCCLSPGLR 976

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRK 409
             +AF +  G    + +   +G + R  +  +  ++   ++P GR+LI S  
Sbjct: 977  FVAFGEEDGSIKILEL--PNGREFRSRIGHEKAVRRVQFTPDGRTLISSSD 1025


>gi|126339608|ref|XP_001364944.1| PREDICTED: similar to apoptotic peptidase activating factor 1 isoform
            2 [Monodelphis domestica]
          Length = 1241

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 85/241 (35%), Gaps = 33/241 (13%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR----IDRAPKRIGNFRSMILAPR 264
              ++ +   +F+P+ + +  ++ D    ++V+   +     +    + + +FR +     
Sbjct: 993  GHEKAVRRVQFTPDGRTLISSSDD--STVQVWNWQSEEFVFLKAHQEPVKDFRLLQ---- 1046

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
                    L++   D  + ++++ L     +  T      +S   SP++++    S    
Sbjct: 1047 -----NSRLLTWSFDGTVKVWNI-LTGKVEKDFTCHQGTVLSCDVSPNATKF---SSTSA 1097

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---- 380
             +   +     S      +  E      V+S    L+A T     +  I  +   G    
Sbjct: 1098 DKTAKIWNFESSFPLHELRGHEGCVRCSVFSGDNALLA-TGDDNGEIRIWSVSSGGLLHS 1156

Query: 381  -----SQERLLVEDSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRNETLI 431
                  +E        +    +SP GR L+    + +  D DTG  L +   NG N   I
Sbjct: 1157 CLPLTVEEGEATYGGWVTDLHFSPDGRMLVSAGGYLKWWDVDTGESLQTFYTNGTNLKTI 1216

Query: 432  N 432
            +
Sbjct: 1217 H 1217



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 46/291 (15%), Positives = 93/291 (31%), Gaps = 40/291 (13%)

Query: 128  FRLWDVKDRKQ---IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
             +LWDV    +   I  K+ F +    +        D+         D    +   +   
Sbjct: 756  LKLWDVSSANECSSIDVKQHFLTGDGRQD-----DVDVVVKCCSWSNDGARLMAAAA--- 807

Query: 185  VSGIIKNSLCVMDRDGANI-RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
                  N L V D    N+   +  S    +    F P     A A         V L +
Sbjct: 808  ------NRLLVFDVQSRNLLGEIHTSHSSTIRFCDFFPKSHLAAVALSH----YCVELWN 857

Query: 244  TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            T             S +    FS +G    ++   D+ + ++        T ++     I
Sbjct: 858  TDTGLKVADCRGHLSWVHCVAFSPDGSS-FLTSSDDQTIRLW-------ETRKVCKNSAI 909

Query: 304  ----NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 +  ++  D   +V   D     +L ++         +++  ++       SP   
Sbjct: 910  MLKQEVDVAF-RDDEVMVLAIDNI--RRLQLINGKTGHTDYLTEAHKSRISCCCLSPGLR 966

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRK 409
             +AF +  G    + +   +G + R  +  +  ++   ++P GR+LI S  
Sbjct: 967  FVAFGEEDGSIKILEL--PNGREFRSRIGHEKAVRRVQFTPDGRTLISSSD 1015


>gi|126339610|ref|XP_001365015.1| PREDICTED: similar to apoptotic peptidase activating factor 1 isoform
            3 [Monodelphis domestica]
          Length = 1208

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 85/241 (35%), Gaps = 33/241 (13%)

Query: 209  SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR----IDRAPKRIGNFRSMILAPR 264
              ++ +   +F+P+ + +  ++ D    ++V+   +     +    + + +FR +     
Sbjct: 960  GHEKAVRRVQFTPDGRTLISSSDD--STVQVWNWQSEEFVFLKAHQEPVKDFRLLQ---- 1013

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
                    L++   D  + ++++ L     +  T      +S   SP++++    S    
Sbjct: 1014 -----NSRLLTWSFDGTVKVWNI-LTGKVEKDFTCHQGTVLSCDVSPNATKF---SSTSA 1064

Query: 325  KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---- 380
             +   +     S      +  E      V+S    L+A T     +  I  +   G    
Sbjct: 1065 DKTAKIWNFESSFPLHELRGHEGCVRCSVFSGDNALLA-TGDDNGEIRIWSVSSGGLLHS 1123

Query: 381  -----SQERLLVEDSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRNETLI 431
                  +E        +    +SP GR L+    + +  D DTG  L +   NG N   I
Sbjct: 1124 CLPLTVEEGEATYGGWVTDLHFSPDGRMLVSAGGYLKWWDVDTGESLQTFYTNGTNLKTI 1183

Query: 432  N 432
            +
Sbjct: 1184 H 1184



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 71/197 (36%), Gaps = 23/197 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S +  ++  A  +     R+ L +T             S +    FS +G    ++  
Sbjct: 804 SWSNDGARLMAAAAN-----RLLLWNTDTGLKVADCRGHLSWVHCVAFSPDGSS-FLTSS 857

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFI----NISASYSPDSSQIVFESDREGKEQLYVMQS 333
            D+ + ++        T ++     I     +  ++  D   +V   D     +L ++  
Sbjct: 858 DDQTIRLW-------ETRKVCKNSAIMLKQEVDVAF-RDDEVMVLAIDNI--RRLQLING 907

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNL 392
                  +++  ++       SP    +AF +  G    + +   +G + R  +  +  +
Sbjct: 908 KTGHTDYLTEAHKSRISCCCLSPGLRFVAFGEEDGSIKILEL--PNGREFRSRIGHEKAV 965

Query: 393 QAPTWSPSGRSLIFSRK 409
           +   ++P GR+LI S  
Sbjct: 966 RRVQFTPDGRTLISSSD 982


>gi|297197020|ref|ZP_06914417.1| predicted protein [Streptomyces sviceus ATCC 29083]
 gi|297146563|gb|EDY59706.2| predicted protein [Streptomyces sviceus ATCC 29083]
          Length = 739

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/290 (13%), Positives = 85/290 (29%), Gaps = 37/290 (12%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR 204
              P+++R ++  ++     S+              S S       + L  +D  G    
Sbjct: 5   SGGPSTFRDLSALVACPRVNSLALSVDGTRLVAAVQSLSGDGTRFVSGLWEIDPTGERDA 64

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-----IGNFRSM 259
                 D+    P F P+      +     D          +   P R     +      
Sbjct: 65  LRLTRSDRGESAPVFGPDGTLYFLSGRAAADGDADEDQGAALWALPPRGEAVVVARHPGG 124

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATER---LTNTLFINISAS--YSPD 312
           I A   + +     +             +      A  +   +T  L  +   +  +  D
Sbjct: 125 IAAVTVARD--SGALCHTAGLLPGAADAEAHGKLRAARQDAKVTAIL-YDAGPTRAWDHD 181

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKFSG 368
                      G E+ +    +G+D + +    +        D   SP G  +A+ +F  
Sbjct: 182 ----------LGPEEPHTFVRSGTDAEPVVAGGQGVGLEDPGDAALSPDGTRVAYRRFVP 231

Query: 369 EKF------AIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKK 410
            +       A+ V      +E  +V D     +AP ++  G +++  R +
Sbjct: 232 GRVPDEHRTAVVVADAVSGEEIHVVGDREHLYEAPRFTHDGSAVVCCRMR 281


>gi|11139411|gb|AAG31685.1|AF125254_1 activated protein kinase C receptor LACK [Leishmania panamensis]
          Length = 312

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 104/299 (34%), Gaps = 33/299 (11%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV------SESVVSGIIKNS 192
           ++      +  SW+      S D    +   + + ++  +        ++  ++     S
Sbjct: 29  VVSTSRDGTAISWKSNPDRHSVDSDYGLPNHRLEGHTGFVSCVSLAHATDYALTASWDRS 88

Query: 193 LCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           + + D R+G + R        +L    FSP+ + +   +   ++++RV+ +         
Sbjct: 89  IRMWDLRNGQSQRKFLKHTKDVLAV-AFSPDDRLI--VSAGRDNVIRVWNVAGECMHEFL 145

Query: 252 RIGNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           R G     + +  FS + +   ++S   D  + +++V+ +      L        + + S
Sbjct: 146 RDG-HEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVN-EGKCERTLKGHSNYVSTVTVS 203

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-- 368
           PD S         GK+   ++    + ++    + E++     +SP    +         
Sbjct: 204 PDGSLCA----SGGKDGAALLWDLSTGEQLFRINVESAINQIAFSPNRFWMCVAAEKSLS 259

Query: 369 -----EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                 K  I  +  DG       + S   +  WS  G  L        D   +++SI 
Sbjct: 260 VYDLESKAVIAELTPDG------TKPSECISIAWSADGNRLY---SGHKDNLIRVWSIS 309


>gi|332023948|gb|EGI64166.1| WD repeat-containing protein 26 [Acromyrmex echinatior]
          Length = 601

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 69/202 (34%), Gaps = 19/202 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +       ++  +FSP+  K+A    D   I+     +T      K +      +    
Sbjct: 276 QILNDHCDEVWYCKFSPDGLKLATGGKDMTVIIWDVDPETLKVTHRKTLEGHSYGVGVIA 335

Query: 265 FSSNGKRALISVQKD-EAMDIYSVDLQSNATE-RLTNTLFIN-ISASYSPDSSQIVFESD 321
           +S +    L+   +D   + ++S+D        +LT +   +  + ++  DS++ V    
Sbjct: 336 WSPDSNYLLVCGPEDCPELWLWSIDTPDCELRVKLTQSTDDSLTACAWHRDSNKFVTGGI 395

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDG 380
           R    Q Y    +G+    +S   E      +W    G  +     +  +        D 
Sbjct: 396 RG---QFYQCDMDGN----VSDSWEGVRVKCLWCRSDGRTVL-ASDTHHRIRSYTFD-DL 446

Query: 381 SQERLLVEDSNLQAP--TWSPS 400
               +L E    + P  ++S  
Sbjct: 447 GDATILQE----EHPIMSFSVD 464


>gi|322694138|gb|EFY85976.1| putative histone transcription regulator [Metarhizium acridum CQMa
           102]
          Length = 1039

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/240 (17%), Positives = 77/240 (32%), Gaps = 47/240 (19%)

Query: 219 FSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKR 271
            SP+ +++A A             +Y         P+++    +    I + RFS NG+ 
Sbjct: 25  ISPDGKRLATAGGDGHVRVWSTDAIYNAKDASYTKPRQLCHMSHHLGTIHSVRFSPNGRY 84

Query: 272 ALISVQKDEAMDIYSVDLQSNAT------------------ERLTNTLFINISASYSPDS 313
                   +   I    L   A                   +RL          ++SPDS
Sbjct: 85  LA---SGADDKLICVYHLDKGAPAIAFGNNDPPPAENWKTYKRLIGHENDVQDLAWSPDS 141

Query: 314 S---------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           S         ++V  S     E+L  + ++ S  K I+ D  A+ F    S    +  F 
Sbjct: 142 SLLVSVGLDSKVVVWSGYT-FEKLKAIPAHQSHVKGITFD-PANKFFATASDDRTIKIFR 199

Query: 365 -------KFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
                      +  +  V++   S   +     +  +  +WSP G  +  +   +G   S
Sbjct: 200 YTPPAPNSTQHDMISNFVLETTISAPFKSSPLTTYFRRCSWSPDGNHIAAANAVNGPVSS 259



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 81/245 (33%), Gaps = 46/245 (18%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             +  + +  +SP+   +     D +    V +         K I   +S +    F   
Sbjct: 127 GHENDVQDLAWSPDSSLLVSVGLDSK----VVVWSGYTFEKLKAIPAHQSHVKGITFDPA 182

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERL----------TNTLFINISA--------SYS 310
            K    +   D  + I+     +  + +           T +     S         S+S
Sbjct: 183 NKFFA-TASDDRTIKIFRYTPPAPNSTQHDMISNFVLETTISAPFKSSPLTTYFRRCSWS 241

Query: 311 PDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP------------- 356
           PD + I   +   G    + +++    D +      EA     ++SP             
Sbjct: 242 PDGNHIAAANAVNGPVSSVAIIERTRWDSEINLIGHEAPTEVCMFSPRLFHTVKPDENTT 301

Query: 357 -QGD----LIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSR 408
             G     L+     +G+   + +   + S+  ++++D    ++   +W+P G++L F+ 
Sbjct: 302 SNGSSNQLLVTVAATAGQDKTLCIWNTNTSRPVVVLQDLSSKSISDLSWAPDGQTL-FAS 360

Query: 409 KKDGD 413
             DG 
Sbjct: 361 SLDGG 365


>gi|295132522|ref|YP_003583198.1| dipeptidyl-peptidase IV [Zunongwangia profunda SM-A87]
 gi|294980537|gb|ADF51002.1| dipeptidyl-peptidase IV [Zunongwangia profunda SM-A87]
          Length = 713

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 45/262 (17%), Positives = 95/262 (36%), Gaps = 48/262 (18%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-------EDILRVYLMDTRIDRAPKRIG 254
           N + LT   D+ + EP FSP+  K+AY   ++       E+  +    D +I+     + 
Sbjct: 118 NSKKLTKLSDKKIQEPTFSPDNSKIAYVFNNNIYVYDVVENSEKQITKDGKINSIINGVT 177

Query: 255 NF-----RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           ++        + A  +++ G R       +  +  +S+D+  +                 
Sbjct: 178 DWVYEEELGFVKAFEWNNKGDRIAFLRFDESKVPEFSMDIFGSDLY-------------- 223

Query: 310 SPDSSQIVFESDREGKEQ----LYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLI-- 361
            PD  Q VF+  + G+      L++        + I     + ++ P   W+   D I  
Sbjct: 224 -PD--QQVFKYPKAGEANSDVSLHMYDVATEATQEIDLGDYSDFYIPRIKWT-NKDYILS 279

Query: 362 --AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKDGDT 414
                +   +   I V  +D S + +L E            T+      + ++ ++DG  
Sbjct: 280 AQVLNRHQDQLDLIFVNAEDHSTKVVLTEKDEAYVDVTDNLTFLEDNSFI-WTSERDGYN 338

Query: 415 GSKLYSIDLNGRNETLINTPAY 436
              LY+   NG+ +  +    +
Sbjct: 339 HIYLYA--ENGKLKNQVTKGNW 358



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 11/89 (12%), Positives = 35/89 (39%), Gaps = 2/89 (2%)

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE--KF 371
           +  ++ S+R+G   +Y+   NG  + ++++          +  + + + +          
Sbjct: 326 NSFIWTSERDGYNHIYLYAENGKLKNQVTKGNWEVTNYYGYDKESNRLFYQSTENGSVNR 385

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            +  +K +G  ++ L E +      +S  
Sbjct: 386 DVYSIKTNGKGKKRLTEKTGTNNADFSTD 414


>gi|194042629|ref|XP_001927989.1| PREDICTED: TAF5-like RNA polymerase II p300/CBP-associated
           factor-associated factor 65 kDa subunit 5L-like [Sus
           scrofa]
          Length = 589

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/235 (11%), Positives = 66/235 (28%), Gaps = 22/235 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 337 VLRGHCGPVYSTRFLADSSGLLSCSEDM----SIRYWDLGSFTNTVLYQGHAYPVWDVDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+      ++    + P+S+ +   S   
Sbjct: 393 SP--YSLYFASGSHDRTARLWSFDR--TYPLRIYAGHLADVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL----YSIDLNGRNETLIN 432
              L     N+ + T+SP    +  +   +      +     S   +G +  L+ 
Sbjct: 503 FKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDIRNTHCSAPTDGSSSELVG 557



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 438 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ----RLK 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 494 LWDLASGTLFKELRGHTDNITSLTFSPDSSLIA-SASMDNSVRVWDI 539


>gi|325185117|emb|CCA19609.1| hypothetical protein PANDA_002987 [Albugo laibachii Nc14]
          Length = 1219

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 67/205 (32%), Gaps = 31/205 (15%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           ++   +         + V+ R       +      I+ + ++S + +K+  A  D     
Sbjct: 84  IYRKLTTSDENGLIIVWVLHRGIWYEEMVNNRNKSIVRDMKWSSDGKKICIAYEDGA--- 140

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
              ++   +D +       ++ ++   +S +GK  +         +I   D Q N    L
Sbjct: 141 ---VIVGSVDGSRLWGKEMKTKLMLVEWSPDGKIIVFVTA---NGEITVHDAQGNKISNL 194

Query: 298 T-------NTLFIN-----------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           T        +   +                + D+  +   + R+GK Q+   + +   + 
Sbjct: 195 TLYALEGRTSAGPDNCIVGLHWYDGCEGHVTDDAPTLA-VAFRDGKVQITRGRFD---EN 250

Query: 340 RISQDKEASYFDPVWSPQGDLIAFT 364
            +  D         W+  G +IA T
Sbjct: 251 AVLIDTGIELTQCKWNNDGTVIALT 275



 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 91/264 (34%), Gaps = 49/264 (18%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + L    D ++    ++   +K+   T D+  ++ V+++   I          +S++   
Sbjct: 67  QTLEGHHDSVICA-TWNSIYRKL--TTSDENGLIIVWVLHRGIWYEEMVNNRNKSIVRDM 123

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTNTLFINISASYSPDSSQIVFES 320
           ++SS+GK+  I+ + D A+ + SVD         +  T  + +     +SPD   IVF  
Sbjct: 124 KWSSDGKKICIAYE-DGAVIVGSVDGSRLWGKEMK--TKLMLVE----WSPDGKIIVFV- 175

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-------EKFAI 373
                 ++ V  + G+    ++    A        P   ++    + G       +   +
Sbjct: 176 --TANGEITVHDAQGNKISNLTL--YALEGRTSAGPDNCIVGLHWYDGCEGHVTDDAPTL 231

Query: 374 GVMKKDGSQERLLVEDSNLQAPT------------WSPSGRSLI-----FSRKKDGDTGS 416
            V  +DG     +      +               W+  G  +      +S         
Sbjct: 232 AVAFRDGK--VQITRGRFDENAVLIDTGIELTQCKWNNDGTVIALTGTQYSSGDKNKDAK 289

Query: 417 KL-YSI----DLNGRNETLINTPA 435
            L Y++    D  G++   +  P 
Sbjct: 290 ALEYNVVQFYDPFGQHLRSLRVPG 313


>gi|309358136|emb|CAP34492.2| CBR-DIG-1 protein [Caenorhabditis briggsae AF16]
          Length = 13580

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/249 (15%), Positives = 75/249 (30%), Gaps = 36/249 (14%)

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +S  +FV++             +  DG+    L          P   P+ Q +       
Sbjct: 6683 DSTGVFVTDDGQVVEKDEDGKPIGPDGS---VLPTDDSGNYIYPAVDPDGQVL------P 6733

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRAL---ISVQKDEAMDIY 285
             D  R  +             +    ++ P         +GK       S+  D + +  
Sbjct: 6734 TDASRKPIYPVHGADGTPLPTDSDGNVIGPDGEPIPTDASGKPLAKDGSSLPTDASGNFV 6793

Query: 286  SVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGK-----EQLYVMQSNGSDQ- 338
             V      T+ L T++    +    +PD + +   +D  GK      Q+      G    
Sbjct: 6794 LVPSDEVTTKVLPTDSEGAEVYPVINPDGTPLA--TDSTGKFVTEDGQIIETDEEGKPVG 6851

Query: 339  ---KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
               + +  D   +Y  PV  P G ++         + +     DG+   LL + +     
Sbjct: 6852 PDGQVLPTDASGNYIYPVVGPDGQVLPTDSNGNPIYPVF--GPDGTP--LLTDATGA--- 6904

Query: 396  TWSPSGRSL 404
               P G  +
Sbjct: 6905 VIGPDGEPI 6913



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 71/245 (28%), Gaps = 38/245 (15%)

Query: 179  FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---------A 229
            +V+ +            +  DG+    L          P   P+ + +A           
Sbjct: 5684 YVTTTGEIIEKDGEGKPLGPDGS---VLPTDGSGNYIYPAIGPDGEPLATDASGKTVYPV 5740

Query: 230  TYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSS-----NGKRALISVQKDEAMD 283
               D   L        I    + I  +     LA   S      +G   LI   ++    
Sbjct: 5741 HGSDGSPLPTDASGAVIGPDGEPIPTDASGKPLAKDGSPLPTDASGNYVLIPSDEETTKA 5800

Query: 284  IYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + + D   N    +T      L  + S ++  D  QIV E D  GK         G D +
Sbjct: 5801 LPT-DDSGNVIYPITRPDGTLLGTDSSGNFVADDGQIV-ERDESGKPM-------GPDGQ 5851

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
             +  D   +Y  P   P G  +A       +    V   DGS        ++       P
Sbjct: 5852 VLPTDDSGNYIYPAVGPDGQTLANVSTI--QHVYSVHGSDGSPL-----PTDASGAVIGP 5904

Query: 400  SGRSL 404
             G  +
Sbjct: 5905 DGEPI 5909



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 40/269 (14%), Positives = 69/269 (25%), Gaps = 64/269 (23%)

Query: 206   LTPSRDQILFEPRFSPNQQKVA------YATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
             L       +  P   P+ + +A      + T D E I R                +    
Sbjct: 10343 LPTDEAGNIIYPIVKPDGKLLATDTTGAFVTDDGEIIERDEEGKPVGPDGSVLPTDASGN 10402

Query: 260   ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              + P    +G+         +    +   ++      L         A   PD   I   
Sbjct: 10403 YIYPAVGPDGQVL-----PTDGTGKHVYPVRGPDGTPLPTDAS---GAVIGPDGEPI--P 10452

Query: 320   SDREGKE--------------QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI---- 361
             +D  GK                  ++ +     K +  D E +   P+ +P G  +    
Sbjct: 10453 TDASGKPLSKDGSPLPTDASGNYILVPAEEETAKALPTDSEGNVIYPITNPDGTPLGTDS 10512

Query: 362   --AFTKFSGEKFAIGVMKKDG---------SQERLLVED-SNLQAPTWSPSGRSLIFSRK 409
               AF    G         +DG             L  +D  N   P   P G+ L     
Sbjct: 10513 SGAFVTQDGSVIE---QNEDGKPVGPDGQVGFHVLPTDDSGNYIYPVVGPDGQVL----- 10564

Query: 410   KDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                         D  G+    ++ P  + 
Sbjct: 10565 ----------PTDSTGKTVHPVSGPDGSP 10583



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 74/239 (30%), Gaps = 35/239 (14%)

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV------AYATYDDEDILRVYLMDTRI 246
              ++  D    + L    +  +  P  +P+   +      AY + D   I ++       
Sbjct: 9028 YILVPSDEETPKALPTDSEGNVVYPITNPDGTPLGTDSSGAYVSQDGSVIEKIEDGKPVG 9087

Query: 247  DRAPKRIGNFRSMILAPRFSSNGKRA--------LISVQKDEAMDIYSVDLQSNATERLT 298
                    +     + P    +G+          +  V+  +      +    +      
Sbjct: 9088 PDGQVLPTDASGNYIYPVVGPDGQVLPTDATGKTVYPVRGPDGTP---LPTDGSGAVIGP 9144

Query: 299  NTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            +   I    S    S D S +   +D  G   L  + +     K +  D E +   P+ +
Sbjct: 9145 DGEPIPTDPSGKPLSKDGSPL--PTDASGNYIL--VPAEEETTKTLPTDSEGNVIYPITN 9200

Query: 356  PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            P G  +      G   +   + +DG+    ++E +    P   P G+ +   R  DG  
Sbjct: 9201 PDGTPL------GTDSSGAFVTQDGT----VIEKNEDGKPV-GPDGQHVYPVRGPDGTP 9248



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 36/250 (14%), Positives = 71/250 (28%), Gaps = 36/250 (14%)

Query: 174  NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +S   FV++   +         +  DG+    L          P   P+ Q +       
Sbjct: 4252 DSTGAFVTQDGSTIDKDEDGKPLGPDGS---VLPTDNSGNYIYPVIGPDGQPL------P 4302

Query: 234  EDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSN--GKRALISVQK---DEAMDIY 285
             D     +   R         +    ++ P     S++  GK           D      
Sbjct: 4303 TDASGNQIYPVRGPDGTPLPTDSDGNVIGPDGEPISTDASGKPLAKDGSPLPTDNNGHYI 4362

Query: 286  SVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGK-----EQLYVMQSNGSDQK 339
             V    + T+ L T++    +     PD + +   +D  GK      Q+  +   G    
Sbjct: 4363 LVPTGDDTTKALPTDSEGNVVYPITKPDGTPL--GTDSTGKFITEEGQVVEIDEEGKPVG 4420

Query: 340  R----ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                 +  D   +Y  P   P G ++         + +     DG+        ++    
Sbjct: 4421 PDGAVLPTDASGNYIYPAVGPDGQVLPTDSTGKTVYPVR--GPDGTPL-----PTDASGV 4473

Query: 396  TWSPSGRSLI 405
               P G  ++
Sbjct: 4474 VIGPDGEPIV 4483



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 71/243 (29%), Gaps = 34/243 (13%)

Query: 179  FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
            FV++   S            DG   + L    D     P   P+ Q +       + +  
Sbjct: 8924 FVTDEGESIDKNEDGKPTGPDG---QVLPTDADGNYIYPAVGPDGQVLP-TDDSGKPVYP 8979

Query: 239  VYLMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRALISVQK---DEAMDIYSVDLQ 290
            V+  D           +    ++ P         +GK           D + +   V   
Sbjct: 8980 VHRSDGAP-----LPTDASGAVIGPDGEPIPTDASGKPLAKDGSPLLTDASGNYILVPSD 9034

Query: 291  SNATERL-TNTLFINISASYSPDSSQI------VFESDREGKEQLYVMQ--SNGSDQKRI 341
                + L T++    +    +PD + +       + S  +G     +      G D + +
Sbjct: 9035 EETPKALPTDSEGNVVYPITNPDGTPLGTDSSGAYVSQ-DGSVIEKIEDGKPVGPDGQVL 9093

Query: 342  SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
              D   +Y  PV  P G ++         + +     DG+   L  + S        P G
Sbjct: 9094 PTDASGNYIYPVVGPDGQVLPTDATGKTVYPVR--GPDGTP--LPTDGSGA---VIGPDG 9146

Query: 402  RSL 404
              +
Sbjct: 9147 EPI 9149



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 26/207 (12%), Positives = 60/207 (28%), Gaps = 23/207 (11%)

Query: 184  VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ--------KVAYATYDDED 235
               G     +   D     ++ L          P   P+ Q        K  Y+    + 
Sbjct: 3680 GPDGQAIKRIIPKDYKKVTLQNLPTDDIGNYIYPAVGPDGQVLPTDASGKPIYSVRGSDG 3739

Query: 236  ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                   +  +    + I    +       S +G     ++  D + +   +  +   T+
Sbjct: 3740 TPLPTDSEGNVGPDGEPI---PTDASGKPLSKDGS----TLPTDASGNYVLIPTEEETTK 3792

Query: 296  RL-TNTLFINISASYSPDSSQIV---FESDREGKEQLYVMQSNGSDQKR----ISQDKEA 347
             L T+++   I     PD + +    + S    +  +      G+        +  D+  
Sbjct: 3793 ALPTDSVGNVIYPIIKPDGTPLATDSYGSHVTDEGHVIEKDDEGNPVGPDGSVLPTDESG 3852

Query: 348  SYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +Y  P   P G ++A        + + 
Sbjct: 3853 NYIYPAVGPDGQVLATDSTGKTVYPVR 3879


>gi|308050150|ref|YP_003913716.1| hypothetical protein Fbal_2440 [Ferrimonas balearica DSM 9799]
 gi|307632340|gb|ADN76642.1| conserved hypothetical protein [Ferrimonas balearica DSM 9799]
          Length = 284

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 4/93 (4%)

Query: 280 EAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNG 335
            A  ++   L+       + +T+    N   +++ DS  ++F SDR  G+  ++      
Sbjct: 22  GATQLHLFSLKDGKVMSHQTVTDAGGYNNQPAFTADSQGLLFSSDRAGGQMDIFRFDIAS 81

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +    ++   E S F P    QGD I +    G
Sbjct: 82  ATLSNLTNTPEQSEFSPQPGQQGDEITYVVEQG 114



 Score = 36.5 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 3/91 (3%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQSNATERLTNTLF-INISAS 308
           + + +       P F+++ +  L S  +    MDI+  D+ S     LTNT      S  
Sbjct: 40  QTVTDAGGYNNQPAFTADSQGLLFSSDRAGGQMDIFRFDIASATLSNLTNTPEQSEFSPQ 99

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                 +I +  + +G     V +       
Sbjct: 100 PGQQGDEITYVVE-QGVPHQSVWRQRQGQPP 129


>gi|297685337|ref|XP_002820249.1| PREDICTED: WD repeat-containing protein 38-like isoform 2 [Pongo
           abelii]
          Length = 304

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 69/212 (32%), Gaps = 21/212 (9%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +        +   RFSP+    A A+ D      V L D    +  + +   +  +    
Sbjct: 46  WRLGGHTGPVKFCRFSPDGHLFASASCD----YTVRLWDVARAKCLRVLKGHQRSVETVS 101

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS + ++   S   D+ + ++ V         L        S+ +SP  + +   S    
Sbjct: 102 FSPDSRQLA-SGGWDKRVMLWEVQ-SGQMLRLLVGHRDSVQSSDFSPTVNCLATGS---W 156

Query: 325 KEQLYVMQSNGSDQK---RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              + +            +  +    +     +S  G L+A   +      I + K   S
Sbjct: 157 DSTIRIWDLRTGTPAVSHQALEGHSGNISCLCYSASG-LLASGSWDKT---IHIWKPTTS 212

Query: 382 QE--RLLVEDSNLQAPTWSPSGRSLI---FSR 408
               +L    + +++  +SP    L    +SR
Sbjct: 213 SLLIQLKGHVTWVKSIAFSPDELWLASAGYSR 244



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 8/145 (5%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           VY  +TR  +   R+G     +   RFS +G     S   D  + ++ V  ++     L 
Sbjct: 34  VYGWETRSGQLLWRLGGHTGPVKFCRFSPDG-HLFASASCDYTVRLWDV-ARAKCLRVLK 91

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  + S+SPDS Q+         +++ + +       R+      S     +SP  
Sbjct: 92  GHQRSVETVSFSPDSRQLA---SGGWDKRVMLWEVQSGQMLRLLVGHRDSVQSSDFSPTV 148

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQE 383
           + +A   +      I +        
Sbjct: 149 NCLATGSWDST---IRIWDLRTGTP 170



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 31/227 (13%), Positives = 74/227 (32%), Gaps = 21/227 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D   A    +     + +    FSP+ +++A   +D     RV L + +
Sbjct: 69  SASCDYTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDK----RVMLWEVQ 124

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT----ERLTNTL 301
             +  + +   R  + +  FS        +   D  + I+  DL++       + L    
Sbjct: 125 SGQMLRLLVGHRDSVQSSDFSPTVNCLA-TGSWDSTIRIW--DLRTGTPAVSHQALEGHS 181

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  YS         +     + +++ +   S      +          +SP    +
Sbjct: 182 GNISCLCYSASG----LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWL 237

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLI 405
           A    +G    + V   +  +    ++   L       ++P G+ L+
Sbjct: 238 A---SAGYSRMVKVWDCNTGKCLETLKQGVLDVAHTCAFTPDGKILV 281


>gi|269973834|emb|CBE66803.1| CG3004-PA [Drosophila ananassae]
          Length = 312

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 11/151 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    S+ + D        + P  D  + +   SP+ + +A    +++    ++ + +  
Sbjct: 139 GSQNGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA--AANNKGNCYIWSLTSSP 196

Query: 247 D------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           D      R  K+I      IL  +FS +  R L++   D    I+  +        L+  
Sbjct: 197 DQKMSTLRPTKKIPAHSRYILRCKFSPD-SRLLLTTSGDGTACIWKTE-DFTKWRELSIE 254

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVM 331
                 A++S DS  + F +  +G  +L+ +
Sbjct: 255 NCWVWDAAFSADSKWL-FTASSDGVARLWKL 284



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 10/127 (7%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-------MK 377
              +++        +RI  + +AS  D   SP G  +A     G  +   +       M 
Sbjct: 142 NGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSSPDQKMS 201

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                +++      +    +SP  R L+ +    GD  + ++  +   +   L     + 
Sbjct: 202 TLRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIWKTEDFTKWRELSIENCWV 258

Query: 438 SDPQWVG 444
            D  +  
Sbjct: 259 WDAAFSA 265



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 53/144 (36%), Gaps = 12/144 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------ 291
            V+L D + ++  + +    + I     S +G+    +        I+S+          
Sbjct: 144 SVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA-AANNKGNCYIWSLTSSPDQKMST 202

Query: 292 -NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              T+++       +   +SPDS  ++  S  +G   ++  + + +  + +S +    + 
Sbjct: 203 LRPTKKIPAHSRYILRCKFSPDSRLLLTTSG-DGTACIWKTE-DFTKWRELSIENCWVW- 259

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIG 374
           D  +S     + FT  S     + 
Sbjct: 260 DAAFSADSKWL-FTASSDGVARLW 282


>gi|168701164|ref|ZP_02733441.1| WD-40 repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 313

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/277 (14%), Positives = 74/277 (26%), Gaps = 43/277 (15%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +L     DGA    +            F+P+ + +   +        + L      R  +
Sbjct: 35  TLWTSFADGARAEAVPLGDGVASQRLAFAPDGRTLFAGS-------DLLLAVDLASRVIR 87

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS----- 306
           R+   R   L    S +G R ++S +           +      RLT     ++      
Sbjct: 88  RVPLDRWHRLGFGVSPDGARLIVSERLGGT-------VGGAEGTRLTCRPTDDLDRPTWQ 140

Query: 307 ----------ASYSPDSSQIV-FESDRE-----GKEQLYVMQSNGSDQKRISQDKEASYF 350
                       + P S + V  ES  E        ++ V   +       +       +
Sbjct: 141 LITRADVLLPPVFPPGSDRFVQLESTHELMAERWAPRVVVRTLDTGAVLTETDLLPVPDY 200

Query: 351 D--PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFS 407
                 SP G  +        +    ++   G+ E +      +     + PSGR L  +
Sbjct: 201 PDQAALSPDGLTLVVRLRD--RIYANLIGAAGAAEVIANPSRKHFTGIAFHPSGRYLAAT 258

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
                D   KLY         T            +  
Sbjct: 259 SN---DKTVKLYDTTSWDLTRTFTWDIGRVRSVAFSP 292



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 44/139 (31%), Gaps = 15/139 (10%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +++P    +   +       L+   ++G+  + +      +     ++P G  +   
Sbjct: 15  DELAFAPGGDALA--AAPSWGVTLWTSFADGARAEAVPLGDGVASQRLAFAPDGRTL--- 69

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            F+G    + V        R+ ++  +      SP G  LI S +  G  G         
Sbjct: 70  -FAGSDLLLAVDLASRVIRRVPLDRWHRLGFGVSPDGARLIVSERLGGTVGGA------- 121

Query: 425 GRNETLINTPAYASD-PQW 442
                L   P    D P W
Sbjct: 122 -EGTRLTCRPTDDLDRPTW 139


>gi|170045269|ref|XP_001850238.1| wd-repeat protein [Culex quinquefasciatus]
 gi|167868225|gb|EDS31608.1| wd-repeat protein [Culex quinquefasciatus]
          Length = 788

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 54/158 (34%), Gaps = 19/158 (12%)

Query: 256 FRSMILAPRFS----SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +R     P +S      G     +  +D    ++  D +      + +T  ++  A + P
Sbjct: 546 YRGHN-HPIWSVAESPTGLYLA-TGSRDTTARLWCTDREFPLQIYVGHTQDVDTVA-FHP 602

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           + + +      +   +L+ +        RI  D         +SP G  +A    +GE+ 
Sbjct: 603 NGNYLA-TGSTDLTVRLWCV--TSGKLFRIFTDCRQPVNRISFSPDGKYLA---AAGEEN 656

Query: 372 AIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI 405
            + +          L E     +P    TWS + R  +
Sbjct: 657 RVRIFDLAAGS--QLTELREHSSPVTCVTWSANSRHFV 692



 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 51/185 (27%), Gaps = 11/185 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++        N R +    +  ++    SP    +A  + D        L  T 
Sbjct: 525 SVSRDLTMRAWQASDYNCRAVYRGHNHPIWSVAESPTGLYLATGSRDT----TARLWCTD 580

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFIN 304
            +   +        +    F  NG     +   D  + ++ V   S    R+ T+     
Sbjct: 581 REFPLQIYVGHTQDVDTVAFHPNGNYLA-TGSTDLTVRLWCV--TSGKLFRIFTDCRQPV 637

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              S+SPD   +    +     ++ +       Q    ++  +      WS         
Sbjct: 638 NRISFSPDGKYLAAAGEE---NRVRIFDLAAGSQLTELREHSSPVTCVTWSANSRHFVSA 694

Query: 365 KFSGE 369
              G 
Sbjct: 695 GADGT 699



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 49/145 (33%), Gaps = 9/145 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    +  +   D      +     Q +    F PN   +A  + D    L V L    
Sbjct: 567 TGSRDTTARLWCTDREFPLQIYVGHTQDVDTVAFHPNGNYLATGSTD----LTVRLWCVT 622

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTLFIN 304
             +  +   + R  +    FS +GK    + +++    +   DL   +    L       
Sbjct: 623 SGKLFRIFTDCRQPVNRISFSPDGKYLAAAGEEN---RVRIFDLAAGSQLTELREHSSPV 679

Query: 305 ISASYSPDSSQIVFESDREGKEQLY 329
              ++S +S   V  +  +G  +++
Sbjct: 680 TCVTWSANSRHFV-SAGADGTVRVW 703


>gi|159570616|emb|CAP19506.1| excision repair cross-complementing rodent repair deficiency,
           complementation group 8 [Danio rerio]
          Length = 400

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 94/312 (30%), Gaps = 37/312 (11%)

Query: 111 LVTGRVI-KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           ++ GR +   G D + V + L +   + Q   K   +   S R + H  S +  Q    +
Sbjct: 53  VIDGRYMLSGGSDGVIVIYDLENNSKKPQYTCKAICTVGRSSRHV-HKFSVETVQWYPHD 111

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            G F S     +  V              DG             ++    SP  +K +  
Sbjct: 112 TGMFVSSSFDKTMKVWDAETLKPADEFQFDG------------NVYCHHMSPIARKHSLV 159

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
               +D  +V L D +       +   R  IL+ ++S   +  L +   D  + I+ V  
Sbjct: 160 AVGTKDP-KVQLCDLKSGSRIHILQGHRGEILSVKWSPRYEHILATASTDSRVRIWDVRR 218

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            S +   L         AS           +   G+       ++G     ++       
Sbjct: 219 ASGSLFTLDQHNGDKSKAS------SEAVNTAHNGRVNGLCFTADG--LHLLTTGT---- 266

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIG---VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                     +  +   +GE   +    V+ +     +  V         + P G S+  
Sbjct: 267 -------DDRMRLWNSGTGENTLVNYGKVVNESRKGLKFTVSRGCSPEFVFVPCGSSVAV 319

Query: 407 SRKKDGDTGSKL 418
                G+  + L
Sbjct: 320 YGLHSGELITML 331


>gi|108762815|ref|YP_629018.1| WD domain-/G-beta repeat-containing protein [Myxococcus xanthus DK
           1622]
 gi|108466695|gb|ABF91880.1| WD domain G-beta repeat protein [Myxococcus xanthus DK 1622]
          Length = 547

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 65/193 (33%), Gaps = 18/193 (9%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            PR SP        +   E     ++  +      K + N +  I    F+  G R   S
Sbjct: 27  PPRVSPE------LSARLESEPGTWVSGSASGLGRKAVLNNKDFIWGLAFAPQGARVAYS 80

Query: 276 VQKDEAMDIYSVDLQSNATERL----TNTLFINISA-SYSPDSSQIVFESDREGKEQLYV 330
               ++  +   +L S     L     N    ++   ++SPD +++       GK+ +  
Sbjct: 81  RLGSKSYFLSVWELGSAEPTMLADPAINPYEFDVEGVAFSPDGTRVA----TAGKDSVVR 136

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVED 389
           +    +      +  E       + P+G  +    + G    +     + GS+ER     
Sbjct: 137 LFDAATGALVAERRTEEPLSVVAFHPEGQWLVVGSYKGLMTVLSAPALEYGSEER--GHL 194

Query: 390 SNLQAPTWSPSGR 402
             + A  ++P G 
Sbjct: 195 GPVTALAFAPDGT 207



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 52/130 (40%), Gaps = 16/130 (12%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
              +V  S     ++   + +   +   ++PQG  +A+++   + + + V +   ++  +
Sbjct: 42  PGTWVSGSASGLGRKAVLNNKDFIWGLAFAPQGARVAYSRLGSKSYFLSVWELGSAEPTM 101

Query: 386 LVED------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG------RNETLINT 433
           L +        +++   +SP G  +        D+  +L+     G      R E  ++ 
Sbjct: 102 LADPAINPYEFDVEGVAFSPDGTRVA---TAGKDSVVRLFDA-ATGALVAERRTEEPLSV 157

Query: 434 PAYASDPQWV 443
            A+  + QW+
Sbjct: 158 VAFHPEGQWL 167



 Score = 40.4 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 56/166 (33%), Gaps = 14/166 (8%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVYLMDTRIDRAPK--RIGNF 256
           G   + +  ++D I +   F+P   +VAY+    +   L V+ + +          I  +
Sbjct: 52  GLGRKAVLNNKDFI-WGLAFAPQGARVAYSRLGSKSYFLSVWELGSAEPTMLADPAINPY 110

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSS 314
              +    FS +G R        +   +   D  + A   ER T      +  ++ P+  
Sbjct: 111 EFDVEGVAFSPDGTRVA---TAGKDSVVRLFDAATGALVAERRTEEPLSVV--AFHPEGQ 165

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            +V  S +     L         ++R             ++P G L
Sbjct: 166 WLVVGSYKGLMTVLSAPALEYGSEER---GHLGPVTALAFAPDGTL 208



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 48/141 (34%), Gaps = 16/141 (11%)

Query: 311 PDSSQIVFESDREGKEQLY-------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           P+  + V+E +R+G E+         ++ +                     SP G  +A 
Sbjct: 405 PERDRGVYERERKGVEEPQGPFNAGALVDAQSGQVLAKWPVHRGVVATAAISPDGRSLAS 464

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL---IFS---RKKDGDTGSK 417
             +    +       D   E     D +++   +SP GR L    ++     +DGD+   
Sbjct: 465 GGWDKRVYLFTEGDVDARGEHRF--DWSVRRVRFSPDGRWLGVAAWTPQVASRDGDSDPA 522

Query: 418 LYSIDLNGRNETLINTPAYAS 438
              +D+ G     +  P  A 
Sbjct: 523 AVLLDV-GYESPTVQGPGTAG 542


>gi|332215986|ref|XP_003257122.1| PREDICTED: acylamino-acid-releasing enzyme [Nomascus leucogenys]
          Length = 732

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 31/222 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEP 217
           D+I +    ++     + +F  +   + + K+   LCV+D +  NI  L    + +    
Sbjct: 189 DEIARLKKPDQAIKGDQFVFYEDWGENMVSKSIPVLCVLDVESGNISVLEGVPENVSPGQ 248

Query: 218 R-FSPNQQKVAYATYDDEDIL----------RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             ++P    V +  +  E                     I    + + +    + +PR S
Sbjct: 249 AFWAPGDAGVVFVGWWHEPFRLGIRFCTNRRSALYYVDLIGGKCELLSDDSLAVSSPRLS 308

Query: 267 SNGKRALI----SVQKDEA-MDIYSVDLQSNA--------TERLT-NTLFINIS----AS 308
            +  R +     S+        +   D  +            +L  N   I  S      
Sbjct: 309 PDQCRIVYLQYPSLIPHHQCSQLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGC 368

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +S DS ++VF+S +  ++ L+ + +       ++       +
Sbjct: 369 WSADSQRVVFDSAQRSRQDLFAVDTQVGTVTSLTAGGSGGSW 410


>gi|255710935|ref|XP_002551751.1| KLTH0A06754p [Lachancea thermotolerans]
 gi|238933128|emb|CAR21309.1| KLTH0A06754p [Lachancea thermotolerans]
          Length = 514

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 86/259 (33%), Gaps = 33/259 (12%)

Query: 186 SGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSP-------NQQKVAYATYDDEDIL 237
           +G + N++ +   + G N         + +    + P       ++ ++A A+ D     
Sbjct: 202 TGSMDNTIRLWQSEKGENFGDALRGHSKWITSLSWEPIHLVKPGDKPRLASASKDG---- 257

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + DT        +    + +   ++   G+  L S   D+ +  + ++        L
Sbjct: 258 TIKIWDTARRVCLFTLSGHTNSVSCVKW--GGRGVLYSGSHDKTIRAWDMNAGGKCINIL 315

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            +        S S D +  V   D  GK      + +  ++ R    +            
Sbjct: 316 KSHAHWINHLSLSTDYALRVGAFDHTGK------KPSSPEEARAKALENYEKIAKK---N 366

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
           G L      + + F + +     S     R+      +    +SP GR ++       D 
Sbjct: 367 GKLEELMVTASDDFTMYLWDPIKSTKPITRMTGHQKLVNHVAFSPDGRYIV---SASFDN 423

Query: 415 GSKLYSIDLNGRNETLINT 433
             KL+    +GR+ T I T
Sbjct: 424 SIKLW----DGRDGTFIAT 438



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 41/132 (31%), Gaps = 12/132 (9%)

Query: 234 EDILRVYLMD-TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            D   +YL D  +  +   R+   + ++    FS +G+  + S   D ++ ++       
Sbjct: 377 SDDFTMYLWDPIKSTKPITRMTGHQKLVNHVAFSPDGRYIV-SASFDNSIKLW----DGR 431

Query: 293 ATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
               +        S    ++S D   +V  S       L V               +   
Sbjct: 432 DGTFIATFRGHVASVYQVAWSSDCRLLVSCSK---DTTLKVWDVRTKKLSVDLPGHKDEV 488

Query: 350 FDPVWSPQGDLI 361
           +   WS  G  +
Sbjct: 489 YTVDWSVDGKRV 500



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 10/141 (7%)

Query: 268 NGK--RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           NGK    +++   D  M ++     +    R+T    +    ++SPD   IV  S     
Sbjct: 366 NGKLEELMVTASDDFTMYLWDPIKSTKPITRMTGHQKLVNHVAFSPDGRYIVSASF---D 422

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             + +            +   AS +   WS    L+           + V      +  +
Sbjct: 423 NSIKLWDGRDGTFIATFRGHVASVYQVAWSSDCRLLVSCSKDTT---LKVWDVRTKKLSV 479

Query: 386 LVEDSNLQAPT--WSPSGRSL 404
            +     +  T  WS  G+ +
Sbjct: 480 DLPGHKDEVYTVDWSVDGKRV 500


>gi|218261000|ref|ZP_03476019.1| hypothetical protein PRABACTJOHN_01683 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224269|gb|EEC96919.1| hypothetical protein PRABACTJOHN_01683 [Parabacteroides johnsonii
           DSM 18315]
          Length = 299

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/158 (14%), Positives = 54/158 (34%), Gaps = 13/158 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A   +    RD+      +  +  +  + T    D+ R+ +    I +   R      M 
Sbjct: 135 ARKPWRQKDRDRKEVASVWLGDNNR-FFVTRSSRDLHRIDICSYTIGQDSIRPIIEERMN 193

Query: 261 LAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                       +GK  +   ++D    +Y  D + N   R+T   +         ++ +
Sbjct: 194 TYQEVRPLATIGDGKELIQWSERDGWAHLYLYDGEGNLKNRITRGPWHVDQIVKVDEAKR 253

Query: 316 IVF----ESDREGKE---QLYVMQSNGSDQKRISQDKE 346
           +V+      D++       LY +  +GS  ++++    
Sbjct: 254 VVYFLANGKDKDENPYYEHLYRVGLDGSGLQQVTPGDY 291



 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 33/263 (12%), Positives = 81/263 (30%), Gaps = 41/263 (15%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG---NFRS 258
           N   L   + + ++   +SP+ +  A    D+  +  ++++++     P           
Sbjct: 41  NTDTLCNGKRKAVWGIVWSPDSRYFAVTATDERAVKDLWVINSMASPRPTLETYKYQMPG 100

Query: 259 MILAPR---FSSN-----GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              AP    F  +      K    S  KD+ + +     +    +R        +++ + 
Sbjct: 101 EKEAPVEHLFLFDMNDNSHKEIRTSAFKDQTLRLARKPWRQKDRDR------KEVASVWL 154

Query: 311 PDSSQ-IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS----PQGDLIAFTK 365
            D+++  V  S R+         + G D  R   ++  + +  V        G  +    
Sbjct: 155 GDNNRFFVTRSSRDLHRIDICSYTIGQDSIRPIIEERMNTYQEVRPLATIGDGKELIQWS 214

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS-------GRSLIFSRKKDGDTGSK- 417
                  + +   +G+ +  +          W           + +++      D     
Sbjct: 215 ERDGWAHLYLYDGEGNLKNRITRGP------WHVDQIVKVDEAKRVVYFLANGKDKDENP 268

Query: 418 ----LYSIDLNGRNETLINTPAY 436
               LY + L+G     + TP  
Sbjct: 269 YYEHLYRVGLDGSGLQQV-TPGD 290


>gi|294657240|ref|XP_459538.2| DEHA2E05016p [Debaryomyces hansenii CBS767]
 gi|199432541|emb|CAG87765.2| DEHA2E05016p [Debaryomyces hansenii]
          Length = 379

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/241 (16%), Positives = 81/241 (33%), Gaps = 37/241 (15%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + +   D    +Y        +   + SPN  K A  + D +    V + +         
Sbjct: 30  ITISMDDLYKEKYSINKGSLSINTIKISPNGTKFAIGSSDTK----VKIFNLSNGELLTE 85

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      I    FS      + S   D  + ++S+  ++   + L    +   +  +S  
Sbjct: 86  LIGHTKGISDLEFSPINSDIIASCSDDLTIRLWSI-KKAQCLKVLKKHTYHVTAVKFSSK 144

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS----PQGDLIAFTKFSG 368
            + ++  S     E + +          I+    A++ DPV S    P   +IA   + G
Sbjct: 145 GNILISGS---ADETITIWDIVSG----ITLKTLAAHSDPVSSLALTPDSTMIASASYDG 197

Query: 369 EKFAIGVMKKDGSQ-ERLLVEDSNLQA----------------PTWSPSGRSLIFSRKKD 411
               + +   +  Q  + L  +S+                    T+SP+G+ ++ S   D
Sbjct: 198 ---LMRLFDLETGQCLKTLTYNSSSHGTATASTTDVVNLPISNVTFSPNGKYIL-SSSLD 253

Query: 412 G 412
           G
Sbjct: 254 G 254



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 82/227 (36%), Gaps = 25/227 (11%)

Query: 160 DDIY-QSITGEKGDFNSRILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           DD+Y +  +  KG  +   + +S +      G     + + +     +        + + 
Sbjct: 35  DDLYKEKYSINKGSLSINTIKISPNGTKFAIGSSDTKVKIFNLSNGELLTELIGHTKGIS 94

Query: 216 EPRFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
           +  FSP N   +A  + D    L + L   +  +  K +      + A +FSS G   LI
Sbjct: 95  DLEFSPINSDIIASCSDD----LTIRLWSIKKAQCLKVLKKHTYHVTAVKFSSKGN-ILI 149

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL------ 328
           S   DE + I+ + +     + L        S + +PDS+ I   S  +G  +L      
Sbjct: 150 SGSADETITIWDI-VSGITLKTLAAHSDPVSSLALTPDSTMIASASY-DGLMRLFDLETG 207

Query: 329 -------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                  Y   S+G+     +        +  +SP G  I  +   G
Sbjct: 208 QCLKTLTYNSSSHGTATASTTDVVNLPISNVTFSPNGKYILSSSLDG 254


>gi|159480758|ref|XP_001698449.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158282189|gb|EDP07942.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 238

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 78/248 (31%), Gaps = 24/248 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S  +  S+ + D      +              +SP    +A       +   V L D  
Sbjct: 8   SASLDGSVRLWDAATGEPKAALAGGGGPAHCLAYSPTGHLMA----TGGEAGGVSLWDPT 63

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--I 303
              +   +     ++ A  FS +G     S   D+A+ +++     +   +L        
Sbjct: 64  TGVSRSEMRGHNGVVTALAFSVDGGTLA-SGGADKAVVLWAT-FNGSQRAQLKGHTGGLA 121

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                +SPD   ++  S   G     +   +    +   +          +SP G LIA 
Sbjct: 122 PGGLVFSPDGCLLL--SLAAGDPVARLWNVSAGKLQVALEGHRQGLLAGAFSPSGALIAT 179

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLY 419
              +   +       DG+    L   ++   P     ++P G +L+     D     +L+
Sbjct: 180 ASDTVRLW-------DGATGAPLGALTDHIFPIAALAFTPDGATLV---SADTSHTLRLW 229

Query: 420 SIDLNGRN 427
            +D  G  
Sbjct: 230 GLDAGGST 237


>gi|332533886|ref|ZP_08409741.1| hypothetical protein PH505_aw00370 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332036694|gb|EGI73158.1| hypothetical protein PH505_aw00370 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 820

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 67/157 (42%), Gaps = 14/157 (8%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SA-SYSPDS 313
            +I +P++SSN +     V++    +++   +++   + LT+    ++   S   + PDS
Sbjct: 116 GIIRSPKWSSNSQYLAFIVEQPTQANLWLYSVETKQAKELTSAALNSVLTASPYKWLPDS 175

Query: 314 SQIVFE-SDREGKEQLYVMQSNGSDQKRISQDKEA---SYFDPVWSP-QGDLIAFTKFSG 368
           S IV   +   GK +L     N     + S  ++A   +Y + + SP       F     
Sbjct: 176 SAIVANLAVNFGKPRLENNSQNVVPVIQQSTGEKAPARTYQNLLTSPFDESQFKF----Y 231

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +  +  +  DG   + +   S  ++ + SP   +++
Sbjct: 232 GQGQLAYITLDG-NTQAIGSPSLFKSFSVSPDSTNIL 267


>gi|283778803|ref|YP_003369558.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Pirellula staleyi DSM 6068]
 gi|283437256|gb|ADB15698.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Pirellula staleyi DSM 6068]
          Length = 803

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 58/157 (36%), Gaps = 26/157 (16%)

Query: 265 FSSNGKRALISVQKDE--AMDIYSVDLQSNATERL---TNTLFIN----ISASYSPDSSQ 315
           ++ +                 I +VD  +     +   T+  FI+        + P +S+
Sbjct: 357 WADDSSEFYFDYNARGHQTFRIIAVDRATALPRAIVEETSPTFIDYTSKTWRHWLPATSE 416

Query: 316 IVFESDREGKEQLYVMQSNGSDQK-RISQD--------KEASYFDPVWSPQGDLIAFTKF 366
           +++ S+R+G   LY++       K +++Q            S    VW      +A  + 
Sbjct: 417 LLWMSERDGWAHLYLVDLKTGAIKNQLTQGAWVVRKIEHVDSEQRQVW-----FMASGRR 471

Query: 367 SGEK-FAIGV--MKKDGSQERLLVEDSNLQAPTWSPS 400
           +GE  + + +  +  DG+    L E     +  +SP 
Sbjct: 472 AGEDPYHLHLCRVNFDGTGLVQLTEGDGTHSAEFSPD 508


>gi|193848539|gb|ACF22727.1| WD-40 repeat family [Brachypodium distachyon]
          Length = 407

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 46/145 (31%), Gaps = 15/145 (10%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF----INISASYSPDSSQIVFESD 321
           S NG   +++   D  +  +     +     LT   F     N S   SPD   +    D
Sbjct: 201 SPNGATRVMAANNDCVVRAF----DTEKFSLLTQFPFPWSVNNTS--VSPDGKALAVLGD 254

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                   +  S    +    +      F   W P G ++A T        +  ++    
Sbjct: 255 SS---DCLIADSQSGKEIATLRGHLDYSFSSAWHPDGRVLA-TGNQDRTCRLWDVRNTSQ 310

Query: 382 QERLLVED-SNLQAPTWSPSGRSLI 405
              +L     +++   +SP GR L 
Sbjct: 311 SLAVLQGRIGSIRGLEFSPDGRFLA 335



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 48/155 (30%), Gaps = 9/155 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + +A       D     + D++  +    +        +  +  +G+    +  
Sbjct: 241 SVSPDGKALAV----LGDSSDCLIADSQSGKEIATLRGHLDYSFSSAWHPDGRVLA-TGN 295

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D    ++ V   S +   L   +       +SPD     F +  E  + ++V   +   
Sbjct: 296 QDRTCRLWDVRNTSQSLAVLQGRIGSIRGLEFSPDGR---FLAAAEPADFVHVCDVSAGY 352

Query: 338 QKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF 371
            +              +SP  G    F   +   +
Sbjct: 353 ARAQEIGIFGEIAGVSFSPDDGAQALFVGVADRTY 387



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 10/133 (7%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDR 248
            +   + D                 F   + P+ + +A    D    +  V      +  
Sbjct: 255 SSDCLIADSQSGKEIATLRGHLDYSFSSAWHPDGRVLATGNQDRTCRLWDVRNTSQSLAV 314

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA- 307
              RIG+ R +     FS +G+        + A  ++  D+ +         +F  I+  
Sbjct: 315 LQGRIGSIRGLE----FSPDGRFLA---AAEPADFVHVCDVSAGYARAQEIGIFGEIAGV 367

Query: 308 SYSP-DSSQIVFE 319
           S+SP D +Q +F 
Sbjct: 368 SFSPDDGAQALFV 380


>gi|121282054|gb|ABM53608.1| putative prolyl oligopeptidase family protein [uncultured bacterium
           CBNPD1 BAC clone 2089]
          Length = 913

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 48/149 (32%), Gaps = 14/149 (9%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISAS-----YSPDSSQ 315
           PR    G R       D    +  V+L +   +   L+ T  +    S     + PD S 
Sbjct: 332 PRLDPTGVRVAFGASHDGVGSLRLVELATGVESEWPLSPTPALGRGMSGGCFRWLPDGSG 391

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEA---SYFDPVWSPQGDLIAFTKFSGEKFA 372
           IV+ +   G  +  +  +  ++  RI    E    S      S     +A         +
Sbjct: 392 IVYAAKDGGVWEASLPDAGAAEACRIDTHHEGVFSSLHCIAVSEDARFVAAV---DSLTS 448

Query: 373 IGVMKKDGSQERLLVEDSNLQ-APTWSPS 400
           + V+++     R +V        P W   
Sbjct: 449 MVVIERATGITRKVVHQHEFSLDPMWHRD 477



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 37/247 (14%), Positives = 76/247 (30%), Gaps = 32/247 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRALI 274
           R+ P+   + YA  D   +    L D     A +   +   +  +      S + +    
Sbjct: 384 RWLPDGSGIVYAAKD-GGVWEASLPDAGAAEACRIDTHHEGVFSSLHCIAVSEDAR---F 439

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-----QLY 329
               D    +  ++  +  T ++ +    ++   +  D   + ++S           +++
Sbjct: 440 VAAVDSLTSMVVIERATGITRKVVHQHEFSLDPMWHRD--TVYWQSWSPPHMPWDEAEIW 497

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE- 388
              +     +RI+     S      S  G+L A    +  +   GV+        LL   
Sbjct: 498 CATAPDFRARRIAALPGVSLQQVAVSVAGELGAM-NDANGRLRPGVVDAGMVTPLLLSGE 556

Query: 389 ---------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                        ++  WSP G   + +R   G     L  +D   R    + T A A  
Sbjct: 557 PCDCAGAQWGGGGRSWCWSPDGTRYLVARNLAGFG--DLAVVD---RASGAVTTLARAVH 611

Query: 440 P--QWVG 444
               W  
Sbjct: 612 GGVSWTP 618



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 4/91 (4%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G R L++       D+  VD  S A    T    ++   S++P    +   S    
Sbjct: 574 WSPDGTRYLVARNLAGFGDLAVVDRASGAVT--TLARAVHGGVSWTPHG-IVALRSGAVT 630

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
             Q+ +     S ++R+    E    D  WS
Sbjct: 631 PTQVVLFDPV-SFERRVLAMSELPCIDGPWS 660



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 44/148 (29%), Gaps = 15/148 (10%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ------KRISQDKEASYFDPVWSPQGD 359
                P   ++ F +  +G   L +++     +         +  +  S     W P G 
Sbjct: 331 EPRLDPTGVRVAFGASHDGVGSLRLVELATGVESEWPLSPTPALGRGMSGGCFRWLPDGS 390

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQE-RLLVED----SNLQAPTWSPSGRSLIFSRKKDGDT 414
            I +    G  +   +     ++  R+        S+L     S   R +          
Sbjct: 391 GIVYAAKDGGVWEASLPDAGAAEACRIDTHHEGVFSSLHCIAVSEDARFVAAV----DSL 446

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQW 442
            S +      G    +++   ++ DP W
Sbjct: 447 TSMVVIERATGITRKVVHQHEFSLDPMW 474


>gi|166711647|ref|ZP_02242854.1| peptidase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 756

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 9/106 (8%)

Query: 312 DSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
           D +QIV+ S+R+G E LY+    +G   ++I++                 + FT      
Sbjct: 350 DGAQIVWASERDGWEHLYLYDGRSGKVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 409

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSR 408
                      +  DGS    L   +      +SP G+ +  ++SR
Sbjct: 410 GEDPYDRHAYRIGLDGSGLTALTPVAADHEVRYSPDGKWMLDLYSR 455



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 50/129 (38%), Gaps = 12/129 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA-SYSPDSSQIVFESD--RE 323
           +G + + + ++D    +Y  D +S     ++T   ++          + Q+ F +   + 
Sbjct: 350 DGAQIVWASERDGWEHLYLYDGRSGKVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 409

Query: 324 GKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMK 377
           G++      Y +  +GS    ++    A+  +  +SP G  +   +++            
Sbjct: 410 GEDPYDRHAYRIGLDGSGLTALTPV--AADHEVRYSPDGKWMLDLYSRVDLGPVLELRRS 467

Query: 378 KDGSQERLL 386
            DGS  R +
Sbjct: 468 ADGSLARTV 476


>gi|149237194|ref|XP_001524474.1| hypothetical protein LELG_04446 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452009|gb|EDK46265.1| hypothetical protein LELG_04446 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 535

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 50/316 (15%), Positives = 99/316 (31%), Gaps = 66/316 (20%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  +VSG   ++  + D + +   +        +    +SP+   +A  + D  + +R++
Sbjct: 173 SGRMVSGAGDSTARIWDCNTSTPMHTLLGHTNWVLCVAYSPDGTMIATGSMD--NTIRLW 230

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             DT      K +      + +  +      + + K  L S  KD  + ++  D  S   
Sbjct: 231 EADTG-KPIGKPLTGHSKWVSSLSWEPLHLVAPDSKPRLASSSKDGTVKVW--DTASRIC 287

Query: 295 ERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA------ 347
               +    ++S   +S   S IV+ +  +   + + + + G   + +            
Sbjct: 288 TLTMSGHTNSVSCVKWS--GSNIVYSASHDKTIKAWDISAGGKCIQTLKSHAHWVNHLSL 345

Query: 348 --------SYFDPVWSPQGDLIAFTKFSGEKFAIG--VMKKDGS-QERLLVEDSNLQAPT 396
                     FD   S     +A  +   +       V K +G   ERL+    +     
Sbjct: 346 STDYVLRRGGFDHTSSRNSTKLAPEELRKKAKEQYEKVAKLNGVISERLVTASDDFTMYF 405

Query: 397 W------------------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           W                        SP GR ++ S     D   K++    +G   T I 
Sbjct: 406 WEPLKSSKPLLRMTGHQKLVNHVNFSPDGRYVVSSS---FDNSIKIW----DGIRGTFIT 458

Query: 433 TPAYASDP----QWVG 444
           T      P     W  
Sbjct: 459 TLRGHVAPVYQTAWSA 474



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 49/333 (14%), Positives = 94/333 (28%), Gaps = 43/333 (12%)

Query: 117 IKEGKDRLRVEFRLW--DVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
                  +    RLW  D      K + G   + S  SW  + H ++ D    +     D
Sbjct: 216 TMIATGSMDNTIRLWEADTGKPIGKPLTGHSKWVSSLSWEPL-HLVAPDSKPRLASSSKD 274

Query: 173 FNSRILFVSESVVS---GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
              ++   +  + +       NS+  +   G+NI Y       I      S   + +   
Sbjct: 275 GTVKVWDTASRICTLTMSGHTNSVSCVKWSGSNIVYSASHDKTIKAW-DISAGGKCI--- 330

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSS-----------------NG-- 269
                    V  +    D   +R G +  S   + + +                  NG  
Sbjct: 331 QTLKSHAHWVNHLSLSTDYVLRRGGFDHTSSRNSTKLAPEELRKKAKEQYEKVAKLNGVI 390

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              L++   D  M  +     S    R+T    +    ++SPD   +V  S       + 
Sbjct: 391 SERLVTASDDFTMYFWEPLKSSKPLLRMTGHQKLVNHVNFSPDGRYVVSSSF---DNSIK 447

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +            +   A  +   WS    L+           + V      +  + +  
Sbjct: 448 IWDGIRGTFITTLRGHVAPVYQTAWSADNRLLVSCSKDTT---LKVWDIRTKKLSVDLPG 504

Query: 390 SNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
              +     WS  G+ +        D   +L+S
Sbjct: 505 HADEVYAVDWSLDGKRVA---SGGKDKMIRLWS 534



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 21/135 (15%)

Query: 308 SYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           S++P DS ++V      G     +   N S                 +SP G +IA    
Sbjct: 167 SFAPNDSGRMV---SGAGDSTARIWDCNTSTPMHTLLGHTNWVLCVAYSPDGTMIATGSM 223

Query: 367 SGEKFAIGVMKKDGSQER---LLVEDSNLQAPTW------SPSGRSLIFSRKKDG----- 412
                 I + + D  +     L      + + +W      +P  +  + S  KDG     
Sbjct: 224 DNT---IRLWEADTGKPIGKPLTGHSKWVSSLSWEPLHLVAPDSKPRLASSSKDGTVKVW 280

Query: 413 DTGSKLYSIDLNGRN 427
           DT S++ ++ ++G  
Sbjct: 281 DTASRICTLTMSGHT 295


>gi|117606123|ref|NP_001071029.1| jouberin [Danio rerio]
 gi|77744584|gb|ABB02258.1| Ahi1 [Danio rerio]
          Length = 934

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/234 (15%), Positives = 78/234 (33%), Gaps = 35/234 (14%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +         F   FS + + +A A  D +    +     R+     +     S +  
Sbjct: 349 PMHSFRGGQMGCFTLCFSHDGRALAAACADRDAFPLIMWNVERLQTLAHKTLPHPSFVYC 408

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISASYSPDSSQIVF 318
            +F    +  + +   D  + +++VD+Q    + L     +  FIN    + P+ S++ F
Sbjct: 409 AKFHPQAQSLVATGGYDGVLRVWNVDVQDVNGQLLQEFDGHKTFINT-LCFDPEGSRM-F 466

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQD-------KEASYFDPVWS-----PQGDLIAFTKF 366
            +D  G   ++  +     ++  +         KEA       +     P G  +     
Sbjct: 467 SADNSGLIIVWGTKVMPGSRRGATSQWSIEREIKEADLNGISINSLEVHPNGRRLLIHAK 526

Query: 367 SGEKFAIGVMKKDGSQERLL--------VEDSNLQAPTWSPSGRSLIFSRKKDG 412
                 + VM       R+L            +    T++P G  + F+  +DG
Sbjct: 527 DS---VLRVMDL-----RILAVKKYIGATNYRDRINSTFTPCGSFI-FAGSEDG 571


>gi|114586898|ref|XP_001165626.1| PREDICTED: N-acylaminoacyl-peptide hydrolase isoform 7 [Pan
           troglodytes]
 gi|114586900|ref|XP_001165665.1| PREDICTED: acylamino-acid-releasing enzyme isoform 8 [Pan
           troglodytes]
          Length = 732

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 31/222 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEP 217
           D+I +    ++     + +F  +   + + K+   LCV+D +  NI  L    + +    
Sbjct: 189 DEIARLKKPDQAIKGDQFVFYEDWGENMVSKSIPVLCVLDVESGNISVLEGVPENVSPGQ 248

Query: 218 R-FSPNQQKVAYATYDDEDIL----------RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             ++P    V +  +  E                     I    + + +    + +PR S
Sbjct: 249 AFWAPGDAGVVFVGWWHEPFRLGIRFCTNRRSALYYVDLIGGKCELLSDDSLAVSSPRLS 308

Query: 267 SNGKRALI----SVQKDEA-MDIYSVDLQSNA--------TERLT-NTLFINIS----AS 308
            +  R +     S+        +   D  +            +L  N   I  S      
Sbjct: 309 PDQCRIVYLQYPSLIPHHQCSQLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGC 368

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +S DS ++VF+S +  ++ L+ + +       ++       +
Sbjct: 369 WSADSQRVVFDSAQRSRQDLFAVDTQVGTVTSLTAGGSGGSW 410


>gi|118370678|ref|XP_001018539.1| hypothetical protein TTHERM_00285250 [Tetrahymena thermophila]
 gi|89300306|gb|EAR98294.1| hypothetical protein TTHERM_00285250 [Tetrahymena thermophila SB210]
          Length = 2216

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 63/150 (42%), Gaps = 9/150 (6%)

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIV-FESDR 322
            F+ +GK+ L+S    + +   S+D   +  ++ TN T+       +SPD+  +    S+ 
Sbjct: 1435 FTPDGKQILVSQGFMKGLVTISLDENKSEEKQATNLTIPFASKMKFSPDNKYLAIICSNS 1494

Query: 323  EGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 ++ +       + +  +  E+S  D  +S     I  T +     A+  + +D  
Sbjct: 1495 T---SIFDVNKKYEKIQTLQFNSYESSPIDIAFSSNSKYIVATGYD-SSCAVWDISQDFK 1550

Query: 382  QERLLV-EDSNLQAPTWSPSGRSLIFSRKK 410
                +    S++   ++SP G+ + FS  +
Sbjct: 1551 LVSSITGHQSSILNLSYSPDGKYI-FSTSR 1579


>gi|83859556|ref|ZP_00953076.1| prolyl endopeptidase [Oceanicaulis alexandrii HTCC2633]
 gi|83851915|gb|EAP89769.1| prolyl endopeptidase [Oceanicaulis alexandrii HTCC2633]
          Length = 734

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/232 (11%), Positives = 75/232 (32%), Gaps = 32/232 (13%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-------GNFRSMILAPRFSSNGKRALI 274
           +  +  ++  D      V+++   ++   + +        +  + +     S +G +   
Sbjct: 131 DGLRYFFSRNDGLQDQSVFMVQDGLEGEARPLIDPNEWAADGTTALAGTVPSPDGTKLAY 190

Query: 275 SVQKDEAMD--IYSVDLQSNATERLTNT-LFINISA-SYSPDSSQIVFESDREG------ 324
            +    +    I  +D+++  T  L++   ++  S  S++ D S   +    E       
Sbjct: 191 LIADGGSDWRSIRVMDVETGET--LSDEIEWVKFSPLSWAKDGSGFYYSRYPEPEEGEAF 248

Query: 325 -----KEQLYVMQSNGSDQKRISQDKEASYFDPVW----SPQGDLIAFTK---FSGEKFA 372
                 + +Y  +      + +    +    +  W    S  G  +         G    
Sbjct: 249 TALNLNQAIYFHELGTDQSEDVQIMADPDNPEVGWRGFVSDDGQYLIINSSTGTDGNGVH 308

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           I  ++ +G++   + E            G +  F    D   G ++ S+ L+
Sbjct: 309 ILDLETEGAEPVEIFEGFGNNHSYVGNDGETFWFQTDLDASNG-RIVSVSLS 359


>gi|46122641|ref|XP_385874.1| hypothetical protein FG05698.1 [Gibberella zeae PH-1]
          Length = 515

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/264 (14%), Positives = 82/264 (31%), Gaps = 43/264 (16%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    +  + D +    +Y        +    +SP+  ++A  ++D    +R++
Sbjct: 159 SSRLATGSGDKTARIWDTETGTPKYTLSGHTGWVLAVAWSPDGARLATGSFD--KTVRLW 216

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSNATE 295
             DT        +      I    +       +G   L S  KD  + I+ V+       
Sbjct: 217 NPDTG-KAVGNPLTGHAKWITNVVWEPYHLWRDGTPRLASASKDATVRIWVVN-SGKTEH 274

Query: 296 RLTNTLFINISASY---------SPDSSQIVF-----------ESDREGKEQL-----YV 330
            L+          +         S D +  V+            S       L     +V
Sbjct: 275 VLSGHKSSVSCVRWGGEGLIYSASHDKTVRVWNAEKGTLVHTLSSHVHWVNHLALSTDFV 334

Query: 331 MQSNGSDQKRISQDKEA------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-- 382
           +++   D   + + +E         F+     QG +      + + F + +     S   
Sbjct: 335 LRTAFYDHTPVPETEEGKRAKAKERFEKAARFQGRIAERLVTASDDFTMYLWDPSQSTKP 394

Query: 383 -ERLLVEDSNLQAPTWSPSGRSLI 405
             R+L     +   T+SP G  + 
Sbjct: 395 VARMLGHQKQVNHVTFSPDGTLIA 418



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 61/173 (35%), Gaps = 14/173 (8%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
           + R   +I      ILA +FS      L +   D+   I+  D ++   +  L+      
Sbjct: 135 VTRMSHKIPGHGEAILAAQFSPKNSSRLATGSGDKTARIW--DTETGTPKYTLSGHTGWV 192

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSP-----QG 358
           ++ ++SPD +++   S     + + +   +            A +  + VW P      G
Sbjct: 193 LAVAWSPDGARLATGSF---DKTVRLWNPDTGKAVGNPLTGHAKWITNVVWEPYHLWRDG 249

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                +        I V+    ++  L    S++    W   G  LI+S   D
Sbjct: 250 TPRLASASKDATVRIWVVNSGKTEHVLSGHKSSVSCVRWG--GEGLIYSASHD 300



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/132 (13%), Positives = 38/132 (28%), Gaps = 4/132 (3%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L++   D  M ++     +    R+          ++SPD + I             +  
Sbjct: 374 LVTASDDFTMYLWDPSQSTKPVARMLGHQKQVNHVTFSPDGTLIA---SAGWDNHTKLWN 430

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +         +   A  +   +S    L+  T        +  M        L      +
Sbjct: 431 ARDGKFINTLRGHVAPVYQCAFSADSRLLV-TASKDTTLKVWSMASHKLSVDLPGHQDEV 489

Query: 393 QAPTWSPSGRSL 404
            A  W+P G+ +
Sbjct: 490 YAVDWAPDGKRV 501



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 42/140 (30%), Gaps = 6/140 (4%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           Q ++A       D   +YL D      P  R+   +  +    FS +G     S   D  
Sbjct: 367 QGRIAERLVTASDDFTMYLWDPSQSTKPVARMLGHQKQVNHVTFSPDGTLIA-SAGWDNH 425

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             +++          L   +      ++S DS  +V  S       L V           
Sbjct: 426 TKLWNA-RDGKFINTLRGHVAPVYQCAFSADSRLLVTASK---DTTLKVWSMASHKLSVD 481

Query: 342 SQDKEASYFDPVWSPQGDLI 361
               +   +   W+P G  +
Sbjct: 482 LPGHQDEVYAVDWAPDGKRV 501



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 43/147 (29%), Gaps = 17/147 (11%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           A +SP +S  +      G +   +  +     K              WSP G  +A   F
Sbjct: 152 AQFSPKNSSRLATG--SGDKTARIWDTETGTPKYTLSGHTGWVLAVAWSPDGARLATGSF 209

Query: 367 SGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSP-----SGR-SLIFSRKKDGDTGSK 417
                 + +   D  +     L      +    W P      G   L  + K   D   +
Sbjct: 210 DKT---VRLWNPDTGKAVGNPLTGHAKWITNVVWEPYHLWRDGTPRLASASK---DATVR 263

Query: 418 LYSIDLNGRNETLINTPAYASDPQWVG 444
           ++ ++       L    +  S  +W G
Sbjct: 264 IWVVNSGKTEHVLSGHKSSVSCVRWGG 290


>gi|320178447|gb|EFW53415.1| Putative membrane protein [Shigella boydii ATCC 9905]
          Length = 625

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T       F    S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSFI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+        +I  ++  ++  E            +  +
Sbjct: 440 TGTSGKPGAWVMALSPDERTLLVPGA--GRGNIVRINTITHQKEDFPAGDARGTISAMRF 497

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ V     S   +      + Y     SP G  +A   +  +
Sbjct: 498 RPENGEVIFA-DSQGISRISVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 554

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 555 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 603

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 604 SLDPQAIIRHPQYG 617


>gi|195333257|ref|XP_002033308.1| GM20485 [Drosophila sechellia]
 gi|194125278|gb|EDW47321.1| GM20485 [Drosophila sechellia]
          Length = 704

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 68/213 (31%), Gaps = 19/213 (8%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           DR G   + L       ++   F+P    +   + D      + L               
Sbjct: 437 DRSGEVTKSLM-GHTGPVYRCAFAPEMNLLLSCSEDS----TIRLWSLLTWSCVVTYRGH 491

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQ 315
              +   RF+ +G    +S   D+   +++ D  SN   R+      ++    + P+S+ 
Sbjct: 492 VYPVWDVRFAPHG-YYFVSCSYDKTARLWATD--SNQALRVFVGHLSDVDCVQFHPNSNY 548

Query: 316 IVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +    SDR     + +  +      R+    + S     +S  G  +A          I 
Sbjct: 549 VATGSSDRT----VRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVD---HNII 601

Query: 375 VMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLI 405
           +           LL   S + + T+S  G  L 
Sbjct: 602 IWDLSNGSLVTTLLRHTSTVTSITFSRDGTVLA 634



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 10/127 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L   D + A   ++    D    +  F PN   VA  + D      V L D    ++ +
Sbjct: 517 RLWATDSNQALRVFVGHLSDVDCVQ--FHPNSNYVATGSSDR----TVRLWDNMTGQSVR 570

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYS 310
            +   +  + +  FS+ G+    S   D  + I+  DL + +    L        S ++S
Sbjct: 571 LMTGHKGSVSSLAFSACGRYLA-SGSVDHNIIIW--DLSNGSLVTTLLRHTSTVTSITFS 627

Query: 311 PDSSQIV 317
            D + + 
Sbjct: 628 RDGTVLA 634


>gi|195333243|ref|XP_002033301.1| GM21241 [Drosophila sechellia]
 gi|194125271|gb|EDW47314.1| GM21241 [Drosophila sechellia]
          Length = 949

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 77/247 (31%), Gaps = 25/247 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +                +    +S + Q +A    D +    V L +T+      
Sbjct: 374 QLLVWEWQSEQYIMKQQGHSSEMTCIAYSSDGQFIATGGEDSK----VKLWNTQSSFCFV 429

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-------FIN 304
                 S +   +FS N K+ L+S   D  +  + V+ +       T+          ++
Sbjct: 430 TFSEHTSGVTGIQFSRN-KKFLVSSSLDGTVRAFDVN-RYRNFRTFTSPNPAQFSCVAVD 487

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S        Q VF         +++          I    E       +SP     +  
Sbjct: 488 YSGELVAAGGQDVF--------DIFLWSIKTGKLLEIISGHEGPVVSIAFSPVATSSSLV 539

Query: 365 KFS-GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S  +   I    +  S+   +   S++   T+SPSG  +  +      T   ++ I  
Sbjct: 540 SGSWDKTVKIWNCLESNSEHETIDAVSDVTNVTFSPSGEEIAVATLSGNIT---IFDIKS 596

Query: 424 NGRNETL 430
            G+  T+
Sbjct: 597 AGQVATI 603



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 6/106 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T++ N +  ++PD + ++      G  ++ V     +  + +S +   +Y +   SP G 
Sbjct: 13  TIYRNGNLVFTPDGNSVI---SPVGN-RITVYDLKNNKSRTLSLESRYNYTNIALSPDGS 68

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           L+      GE   I +M       R   +   +Q   +SP+G    
Sbjct: 69  LLIAVNERGEAQLISMMSC-TVIHRHKFQTG-VQCICFSPNGAFFA 112


>gi|6911064|gb|AAF31364.1| apical gut membrane polyprotein [Haemonchus contortus]
          Length = 73

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 6/66 (9%)

Query: 359 DLIAFTKFSGE----KFAIGVMKKDGSQ-ERLLVEDSNLQA-PTWSPSGRSLIFSRKKDG 412
             I F+  +      +F + ++ +DG+  ER+        A P +S  G+ +++S  +  
Sbjct: 1   KRIIFSSNTNSTKPSEFHLYIVNEDGTGLERVTFGSGYFNAFPVFSHDGKKVVWSSNRGS 60

Query: 413 DTGSKL 418
                L
Sbjct: 61  TKKGDL 66



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 9/72 (12%)

Query: 270 KRALISVQ----KDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQIVFESDRE- 323
           KR + S      K     +Y V+      ER+T      N    +S D  ++V+ S+R  
Sbjct: 1   KRIIFSSNTNSTKPSEFHLYIVNEDGTGLERVTFGSGYFNAFPVFSHDGKKVVWSSNRGS 60

Query: 324 ---GKEQLYVMQ 332
              G   L++  
Sbjct: 61  TKKGDLNLFIAD 72



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 314 SQIVFESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +I+F S+    +     LY++  +G+  +R++         PV+S  G  + ++   G 
Sbjct: 1   KRIIFSSNTNSTKPSEFHLYIVNEDGTGLERVTFGSGYFNAFPVFSHDGKKVVWSSNRGS 60



 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 27/57 (47%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           RI+F S +  +   +  L +++ DG  +  +T         P FS + +KV +++  
Sbjct: 2   RIIFSSNTNSTKPSEFHLYIVNEDGTGLERVTFGSGYFNAFPVFSHDGKKVVWSSNR 58


>gi|313157335|gb|EFR56759.1| prolyl endopeptidase [Alistipes sp. HGB5]
          Length = 707

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 45/223 (20%), Positives = 73/223 (32%), Gaps = 34/223 (15%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           Q V Y T        V++    +             +    FS +GK    SV    +  
Sbjct: 116 QSVLYRTAQPGGEGEVFIDPNTLSEDGTV------ALSGVTFSKDGKYCAYSVAASGSDW 169

Query: 284 --IYSVDLQSNATERLTNTLFINI----SASYSPDSS-----------QIVFESDREGKE 326
             I  ++        LT+   IN      A ++PDS            + VF S  + ++
Sbjct: 170 VEIRVMNTADRT---LTSDR-INWVKFSGAEWAPDSKGFYYSAYDAPQKGVFSSQNQFQK 225

Query: 327 QLY-VMQSNGSDQKRISQDKEA--SYFDPVWSPQGDL--IAFTKFSGEKFAIGVMKKDGS 381
             Y  + +  S  + I  D E    YF P  S  G    I  ++ +     +     +  
Sbjct: 226 VYYHRLGTPQSADRLIYADAEHPLRYFSPWPSKDGQWLFIVASEGTSGTEVLYKKVSEPK 285

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              LL       AP     G+ L +   +D  +   L  +DLN
Sbjct: 286 FRTLLPGFDADYAPVECRDGQ-LYYVTNRDA-SNYALMKVDLN 326



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 74/246 (30%), Gaps = 31/246 (12%)

Query: 219 FSPNQQKVAYATYDDED---------ILRVYLMDTRIDRAPKRI----GNFRSMILAPRF 265
           ++P+ +   Y+ YD              +VY       ++  R+            +P  
Sbjct: 197 WAPDSKGFYYSAYDAPQKGVFSSQNQFQKVYYHRLGTPQSADRLIYADAEHPLRYFSPWP 256

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE- 323
           S +G+   I   +  +         S    R L      + +     D  Q+ + ++R+ 
Sbjct: 257 SKDGQWLFIVASEGTSGTEVLYKKVSEPKFRTLLPGFDADYAPVECRDG-QLYYVTNRDA 315

Query: 324 GKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               L  +  N  S    +  +      + V S  G L A T     +  +     DG  
Sbjct: 316 SNYALMKVDLNDPSKVSTVIPESGGKLLEGVGSAGGYLFA-TYLEHAQSKVCQYGFDGKL 374

Query: 383 ERL-------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            R         V   + +          L +S        + +Y  D+ G   TL   PA
Sbjct: 375 VREVELPAIGTVSGFDGEK-----DDTELYYSLTNY-IAPATIYKYDIAGGASTLYKAPA 428

Query: 436 YASDPQ 441
              DP 
Sbjct: 429 VNFDPS 434


>gi|225683368|gb|EEH21652.1| dipeptidyl-peptidase [Paracoccidioides brasiliensis Pb03]
          Length = 730

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 75/233 (32%), Gaps = 53/233 (22%)

Query: 220 SPNQQKVAYATYDDEDI------LRVYLMDTRIDRAPKRIGNFRSMILA---------PR 264
           SP+ + VA+ T   E          +Y++          I    S I A         P 
Sbjct: 240 SPDGKTVAFMTKAPELPKANYTTSYIYVVPHDGASTAVPINGPDSSIAADGIVGASSNPV 299

Query: 265 FSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISAS---YSPDSSQI 316
           FS + K+      ++   +     IY   L +     + +    + S     ++PD +  
Sbjct: 300 FSPDSKKLAYFQMEEYNYESDRRVIYVATLSNKKIVSIASN--WDRSPESIKWTPDGANF 357

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              S+   + +L+ +  N            A Y    ++  G + AF   +         
Sbjct: 358 YILSEDRARSRLFTLPVN----------ARADYVPKNFTDNGMVSAFHFLNNS------- 400

Query: 377 KKDGSQERLLVEDSNLQAPTW----SPSGR-SLIFSRKKDGDTGSKLYSIDLN 424
                   +L   S L + +     +P  +  ++FS  +     + L   D++
Sbjct: 401 ------PSVLTTTSTLWSNSIYAIVAPDAKPKVLFSANEHDPELAGLGPEDID 447



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 77/224 (34%), Gaps = 25/224 (11%)

Query: 83  SQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
            +     +I +      +  W +     + +G + K    +       +D K +  +   
Sbjct: 167 PKQLSSARIYDSLWPRHWDTWLTTEFNAVFSGSLTKGYGGKYT-----FDGKLKNLVAPV 221

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           K+  SP         +S D   S  G+   F ++     E   +    + + V+  DGA+
Sbjct: 222 KYAESPYP----PFGVSSDYDLSPDGKTVAFMTK---APELPKANYTTSYIYVVPHDGAS 274

Query: 203 IRYLTPSRDQIL---------FEPRFSPNQQKVAYATYD----DEDILRVYLMDTRIDRA 249
                   D  +           P FSP+ +K+AY   +    + D   +Y+      + 
Sbjct: 275 TAVPINGPDSSIAADGIVGASSNPVFSPDSKKLAYFQMEEYNYESDRRVIYVATLSNKKI 334

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                N+     + +++ +G    I  +      ++++ + + A
Sbjct: 335 VSIASNWDRSPESIKWTPDGANFYILSEDRARSRLFTLPVNARA 378



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 25/126 (19%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGE-------KFAIGVMKKDGSQERLLVED------ 389
                   D   SP G  +AF   + E          I V+  DG+   + +        
Sbjct: 228 YPPFGVSSDYDLSPDGKTVAFMTKAPELPKANYTTSYIYVVPHDGASTAVPINGPDSSIA 287

Query: 390 -----SNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDP- 440
                     P +SP  + L + + ++ +  S    +Y   L+ +    I +  +   P 
Sbjct: 288 ADGIVGASSNPVFSPDSKKLAYFQMEEYNYESDRRVIYVATLSNKKIVSIASN-WDRSPE 346

Query: 441 --QWVG 444
             +W  
Sbjct: 347 SIKWTP 352



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/152 (13%), Positives = 45/152 (29%), Gaps = 37/152 (24%)

Query: 310 SPDSSQIVFESDREGKEQ-------LYVMQSNGSDQKRISQDKE---------ASYFDPV 353
           SPD   + F +      +       +YV+  +G+         +          +  +PV
Sbjct: 240 SPDGKTVAFMTKAPELPKANYTTSYIYVVPHDGASTAVPINGPDSSIAADGIVGASSNPV 299

Query: 354 WSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIF 406
           +SP    +A+ +     +      I V      +   +  + +    +  W+P G     
Sbjct: 300 FSPDSKKLAYFQMEEYNYESDRRVIYVATLSNKKIVSIASNWDRSPESIKWTPDG----- 354

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                    +  Y +  +     L   P  A 
Sbjct: 355 ---------ANFYILSEDRARSRLFTLPVNAR 377


>gi|224025920|ref|ZP_03644286.1| hypothetical protein BACCOPRO_02666 [Bacteroides coprophilus DSM
           18228]
 gi|224019156|gb|EEF77154.1| hypothetical protein BACCOPRO_02666 [Bacteroides coprophilus DSM
           18228]
          Length = 383

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 45/135 (33%), Gaps = 15/135 (11%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVD------LQSNATERLTNTLFINISASYSPDSSQIVF 318
           FS +G  A +  +    +   + D      LQ    + L+     +I    SPD    V+
Sbjct: 238 FSPDGHYAYLITEISGDVVAMAYDGMRLDTLQYIKADTLSAQGSADI--HVSPDGRY-VY 294

Query: 319 ESDREGKEQLYV--MQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGV 375
            S+R   + + V  + +      R+       +  + V +P G  +        +  I  
Sbjct: 295 ASNRLKGDGIAVFEVDTEDGTLNRVGYQPTGIHPRNFVITPNGGFLLVACRDTNEIQIFA 354

Query: 376 MKKDGSQERLLVEDS 390
              D     +L +  
Sbjct: 355 RDADTG---MLTDTG 366


>gi|242824114|ref|XP_002488193.1| transcriptional repressor TupA/RocA, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218713114|gb|EED12539.1| transcriptional repressor TupA/RocA, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 526

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 62/197 (31%), Gaps = 19/197 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALIS 275
            ++P+    A    +  D   V+  + +     + + +    S++   RFS +GK     
Sbjct: 237 NWNPD-DLPATQKREGPDWYAVFNPEVQRVLDVELVHHLVHDSVVCCVRFSRDGKYVA-- 293

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFIN-------ISASYSPDSSQIVFESDREGKEQL 328
                       D+ +           ++        S  +SPD   +   ++    +Q+
Sbjct: 294 --TGCNRSAQIFDVATGQNVATLQDESVDKDGDLYIRSVCFSPDGKYLATGAE---DKQI 348

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V        K +    E   +   ++  G  IA +    +   +  +  +G     L  
Sbjct: 349 RVWDIATRSIKHVFTGHEQDIYSLDFAGNGRYIA-SGSGDKTVRLWDV-LEGKLVYTLSI 406

Query: 389 DSNLQAPTWSPSGRSLI 405
           +  +     SP G  + 
Sbjct: 407 EDGVTTVAMSPDGHYVA 423


>gi|302563633|ref|NP_001181479.1| WD repeat-containing protein 5B [Macaca mulatta]
          Length = 330

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 82/226 (36%), Gaps = 20/226 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +R       + +   +FSPN + +A ++ D      + +      +  K +      I
Sbjct: 31  YALRCTLVGHTEAVSSVKFSPNGEWLASSSADR----LIIIWGAYDGKYEKTLYGHNLEI 86

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+  R + S   D+ + ++  D++S    + L          +++P S+ I+  
Sbjct: 87  SDVAWSSDSSRLV-SASDDKTLKLW--DVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISG 143

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + + +       +             ++  G LI    + G      +    
Sbjct: 144 SF---DETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDG---LCRIWDAA 197

Query: 380 GSQ-ERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             Q  + LV+D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 198 SGQCLKTLVDDDNPPISFVRFSPNGKYILTATL---DNTLKLWDYS 240



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 61/172 (35%), Gaps = 9/172 (5%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG   + L    +  + +  +S +  ++  A+ D      + L D R  +  K +    
Sbjct: 71  YDGKYEKTLY-GHNLEISDVAWSSDSSRLVSASDDK----TLKLWDVRSGKCLKTLKGHS 125

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           + +    F+      +IS   DE + I+ V       + L+       +  ++   S IV
Sbjct: 126 NYVFCCNFNPP-SNLIISGSFDETVKIWEV-KTGKCLKTLSAHSDPVSAVHFNCSGSLIV 183

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             S  +G  +++   ++G   K +  D         +SP G  I        
Sbjct: 184 SGSY-DGLCRIWDA-ASGQCLKTLVDDDNPPISFVRFSPNGKYILTATLDNT 233


>gi|157870387|ref|XP_001683744.1| notchless homolog [Leishmania major strain Friedlin]
 gi|68126810|emb|CAJ05409.1| putative notchless homolog [Leishmania major strain Friedlin]
 gi|146743434|gb|ABQ43163.1| actin-interacting protein 1 [Leishmania major]
          Length = 522

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 15/128 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---P 263
                 ++F  +FSP+   +A  + D      V L +    R    I  FR  + A    
Sbjct: 405 MTGHQGVVFHIQFSPDGTMLASCSADK----SVKLWNAEDGRF---ITTFRGHVAAVYHV 457

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDR 322
            +S +  R L+S  KD  + ++SV           +     I A+ +SPD  ++     +
Sbjct: 458 SWSLD-SRMLVSGSKDTTVKLWSV--AKRELVEDMSGHSDEIYATDWSPDGQKVA-TGSK 513

Query: 323 EGKEQLYV 330
           + + +++V
Sbjct: 514 DKRVRIWV 521



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 6/125 (4%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+   + ++   +FS +G     S   D+++ +++ +            +      S+S 
Sbjct: 404 RMTGHQGVVFHIQFSPDGTMLA-SCSADKSVKLWNAE-DGRFITTFRGHVAAVYHVSWSL 461

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           DS  +V  S       + +      +            +   WSP G  +A T    ++ 
Sbjct: 462 DSRMLVSGSK---DTTVKLWSVAKRELVEDMSGHSDEIYATDWSPDGQKVA-TGSKDKRV 517

Query: 372 AIGVM 376
            I V 
Sbjct: 518 RIWVH 522



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 14/142 (9%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  M +++         R+T    +     +SPD + +   S     + +
Sbjct: 377 GSERLVSCSDDNTMFLWNPQQSVTPVARMTGHQGVVFHIQFSPDGTMLASCS---ADKSV 433

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +  +         +   A+ +   WS    ++              +K     +R LVE
Sbjct: 434 KLWNAEDGRFITTFRGHVAAVYHVSWSLDSRMLVSGSKDT------TVKLWSVAKRELVE 487

Query: 389 DSNLQAP-----TWSPSGRSLI 405
           D +  +       WSP G+ + 
Sbjct: 488 DMSGHSDEIYATDWSPDGQKVA 509



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 31/90 (34%), Gaps = 5/90 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +    FSP+ Q +A           + + D       + +    S +    +
Sbjct: 149 TLDGHSEAVLVVSFSPDSQVLA----TGGGDKEIRIWDMNTLTPVEELKAHTSWVQVLSW 204

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           S +G+  + S  KD  +  ++ + +    +
Sbjct: 205 SPDGRYLV-SGSKDGILANWTHNGEYGNFK 233



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP   ++A T    ++  I  M      E L    S +Q  +WSP GR L+ S  KDG
Sbjct: 161 SFSPDSQVLA-TGGGDKEIRIWDMNTLTPVEELKAHTSWVQVLSWSPDGRYLV-SGSKDG 218



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 30/88 (34%), Gaps = 6/88 (6%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG             ++   +S + + +   + D      V L         + +     
Sbjct: 440 DG-RFITTFRGHVAAVYHVSWSLDSRMLVSGSKDT----TVKLWSVAKRELVEDMSGHSD 494

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYS 286
            I A  +S +G++   +  KD+ + I+ 
Sbjct: 495 EIYATDWSPDGQKVA-TGSKDKRVRIWV 521


>gi|23510451|ref|NP_001631.3| acylamino-acid-releasing enzyme [Homo sapiens]
 gi|38258902|sp|P13798|ACPH_HUMAN RecName: Full=Acylamino-acid-releasing enzyme; Short=AARE; AltName:
           Full=Acyl-peptide hydrolase; Short=APH; AltName:
           Full=Acylaminoacyl-peptidase; AltName: Full=Oxidized
           protein hydrolase; Short=OPH
 gi|12653189|gb|AAH00362.1| N-acylaminoacyl-peptide hydrolase [Homo sapiens]
 gi|12804773|gb|AAH01826.1| N-acylaminoacyl-peptide hydrolase [Homo sapiens]
 gi|16306646|gb|AAH01499.1| N-acylaminoacyl-peptide hydrolase [Homo sapiens]
 gi|119585399|gb|EAW64995.1| N-acylaminoacyl-peptide hydrolase, isoform CRA_b [Homo sapiens]
 gi|119585400|gb|EAW64996.1| N-acylaminoacyl-peptide hydrolase, isoform CRA_b [Homo sapiens]
 gi|123981030|gb|ABM82344.1| N-acylaminoacyl-peptide hydrolase [synthetic construct]
 gi|123995833|gb|ABM85518.1| N-acylaminoacyl-peptide hydrolase [synthetic construct]
          Length = 732

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 31/222 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEP 217
           D+I +    ++     + +F  +   + + K+   LCV+D +  NI  L    + +    
Sbjct: 189 DEIARLKKPDQAIKGDQFVFYEDWGENMVSKSIPVLCVLDVESGNISVLEGVPENVSPGQ 248

Query: 218 R-FSPNQQKVAYATYDDEDIL----------RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             ++P    V +  +  E                     I    + + +    + +PR S
Sbjct: 249 AFWAPGDAGVVFVGWWHEPFRLGIRFCTNRRSALYYVDLIGGKCELLSDDSLAVSSPRLS 308

Query: 267 SNGKRALI----SVQKDEA-MDIYSVDLQSNA--------TERLT-NTLFINIS----AS 308
            +  R +     S+        +   D  +            +L  N   I  S      
Sbjct: 309 PDQCRIVYLQYPSLIPHHQCSQLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGC 368

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +S DS ++VF+S +  ++ L+ + +       ++       +
Sbjct: 369 WSADSQRVVFDSAQRSRQDLFAVDTQVGTVTSLTAGGSGGSW 410


>gi|320593657|gb|EFX06066.1| chromosome segregation protein [Grosmannia clavigera kw1407]
          Length = 874

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 76/242 (31%), Gaps = 29/242 (11%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G   +   FV  S    +   SL     D  +           + +   S + +  A A+
Sbjct: 59  GVAATDDFFVVGSEDGTVSLYSL-----DTNSFERFLVRTSLPVRDVALSADGRWCAVAS 113

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               D L V ++ T  +   + +           F   G+   ++   D  +     D +
Sbjct: 114 ----DELTVRVVGTEDNTVVRHLRAHSRPTKHVAFDPQGRTIALACT-DGIIYSLESDAE 168

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASY 349
           +      T  +       + PDS              + V+  N  +++R+     E   
Sbjct: 169 A------TAHIA------WHPDSRAFAVA---TPTRDIQVVSRNDWERQRVFSGGHEGEI 213

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               WSP G L+A +     K  +   +      R   + + +Q   W P+   + F+  
Sbjct: 214 TALAWSPNGALLA-SAGRDGKMLLWETRTQSVVAR--HDYAGVQDIAWHPTNNLVSFTNG 270

Query: 410 KD 411
           + 
Sbjct: 271 EG 272


>gi|317505508|ref|ZP_07963426.1| dipeptidyl peptidase IV [Prevotella salivae DSM 15606]
 gi|315663421|gb|EFV03170.1| dipeptidyl peptidase IV [Prevotella salivae DSM 15606]
          Length = 746

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/172 (13%), Positives = 60/172 (34%), Gaps = 19/172 (11%)

Query: 268 NGKRALISVQKDE--AMDIYSVDLQSNATERLTNT---LFINISASYS----PDSSQIVF 318
           +G     + +      +++  ++L +     +        +N++  +S        +I++
Sbjct: 294 DGN-LYFTRRNRGVDTLELCKLNLPTGKVSVVIQEVCKPHLNVN-LWSYRLINHGKEIIW 351

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-GDLIAFTKFSGEK------F 371
            S+R G+   Y+  + G  + RI++          +       + F  +  ++       
Sbjct: 352 WSERTGRGNYYLYDNQGKLKGRITRGDNLVAGRIEYVDTLKRRLIFMGYGDKQAYDPEYA 411

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSID 422
              V   +G +++ L          +SP  R  I S  +    T   +  +D
Sbjct: 412 YYYVADFNGKRQQTLTYGDGTHELDFSPDHRFAIDSYSRMNLPTVYNVVDVD 463


>gi|313199940|ref|YP_004038598.1| 40-residue yvtn family beta-propeller repeat-containing protein
           [Methylovorus sp. MP688]
 gi|312439256|gb|ADQ83362.1| 40-residue YVTN family beta-propeller repeat protein [Methylovorus
           sp. MP688]
          Length = 356

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 62/176 (35%), Gaps = 13/176 (7%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             R+ ++D +  +  + I           FS +GK+ +I+ + D  + ++  ++ +    
Sbjct: 147 PARIAIVDLKKGKKIREIVGGPETEGI-EFSKDGKKLIITNEADNTITVH--NIATGKLL 203

Query: 296 RLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           +   T            SPD    V   +     +  V+       K +   K    +  
Sbjct: 204 KTVKTKEYGERPRGIKVSPDGKTYVATLEFG--NKFVVLDDKFKVLKTVDTGKGP--YGI 259

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFS 407
            +   G  I +   S EK A+ V      S+ + +         +++P  + ++ +
Sbjct: 260 AYDRDGKHI-YVATSKEK-ALEVYDAKTYSKVKSVTTGDRCWHFSFTPDDKQILLA 313


>gi|288801267|ref|ZP_06406722.1| dipeptidyl aminopeptidase IV [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288331878|gb|EFC70361.1| dipeptidyl aminopeptidase IV [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 735

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/269 (14%), Positives = 90/269 (33%), Gaps = 57/269 (21%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPR-------------FSPNQQKVAYATYDD---E 234
           N+L V D+ G   +  T     I++                +S + +++A+   D    E
Sbjct: 159 NNLFVSDKKGNKTQLTTDGSSDIVYGKTVHRDEFGIYKGLFWSNDGEQLAFYRMDQSMVE 218

Query: 235 DILRVYLMDTRIDRAPKRI-----------------GNFRSMILAP-----------RFS 266
              +V +        P +                     +++ LA            ++S
Sbjct: 219 SYPQVNVFTPIATLEPDKYPMAGRTSHKVTVGIYNASTGKTIYLAVGDPTNRYFTNIQWS 278

Query: 267 SNGKRALISVQKDEAMDIYSVD----LQSNATERL-TNTLFINISA----SYSP-DSSQI 316
            +  + L  ++ +       +D          + L T      +      ++ P + +Q 
Sbjct: 279 PD-NKILYLIELNRKQTKMQLDAYDAATGKKIKTLYTEESNKYVHPVTPITFLPWNKNQF 337

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGEKFAIG 374
           + +S+++G   LY+  +NG  Q++I+  K        ++       I  T+ +  +  I 
Sbjct: 338 ILQSEKDGYNHLYLFNTNGELQRQITSGKWVVLDLMGFNSSKKCAYILSTECNPIQNNIF 397

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
            +     +  LL       A T+  +G+ 
Sbjct: 398 AVDIASGKRTLLDNGKGCHANTYGENGKH 426


>gi|256786888|ref|ZP_05525319.1| peptide hydrolase [Streptomyces lividans TK24]
          Length = 600

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/266 (13%), Positives = 78/266 (29%), Gaps = 35/266 (13%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +    R   +  P ++ +    +    +      +Y  D R     +++ +  +    
Sbjct: 10  PDWEKRFRAPRVSLPDWAEDAPDRSLFVSNATGTYELYAWD-RSSGEQRQVTDRPNGTTD 68

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS------ASYSP----- 311
              + +G        KD          +     R       +         SY       
Sbjct: 69  GVLAPDGDWIWWFDDKDGD--------EFGVWRRQPFAGGPDEEAVPGLDPSYPAGLALG 120

Query: 312 -DSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            D    V   S  E    +++ + +G     I + +E S      S  G LIA       
Sbjct: 121 RDGRTAVIGRSTDEDGTTIHLARGDGGAPAEIYRHRE-SAGVGDLSHDGSLIAIEHTEHG 179

Query: 370 K---FAIGVMKKDGSQERLLVEDSNLQAP------TWSP-SG-RSLIFSRKKDGDTGSKL 418
                A+ V++ DGS    L +    +         ++P  G   L+   ++ G     +
Sbjct: 180 DAMHSALRVLRPDGSTVAELDDTRGGEEELGLEVLGFAPVDGDTRLLIGHQRRGRWEPLV 239

Query: 419 YSIDLNGRNETLINTPAYASDPQWVG 444
           + +    + +  +  P   S  +W  
Sbjct: 240 WDVATGEQTDLALELPGDVSA-EWYP 264



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 65/195 (33%), Gaps = 16/195 (8%)

Query: 247 DRAPKRIGNFRSMILAPRFS--------SNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
               +++ ++     APR S         +  R+L         ++Y+ D  S    ++T
Sbjct: 3   QTQGEQVPDWEKRFRAPRVSLPDWAEDAPD--RSLFVSNATGTYELYAWDRSSGEQRQVT 60

Query: 299 NTLFINISASYSPDSSQIVFESDREGKE-QLYVMQ--SNGSDQKRISQDKEASYFDPVWS 355
           +          +PD   I +  D++G E  ++  Q  + G D++ +     +        
Sbjct: 61  DRPNGTTDGVLAPDGDWIWWFDDKDGDEFGVWRRQPFAGGPDEEAVPGLDPSYPAGLALG 120

Query: 356 PQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGD 413
             G      + + E    I + + DG     +     +      S  G  +     + GD
Sbjct: 121 RDGRTAVIGRSTDEDGTTIHLARGDGGAPAEIYRHRESAGVGDLSHDGSLIAIEHTEHGD 180

Query: 414 T-GSKLYSIDLNGRN 427
              S L  +  +G  
Sbjct: 181 AMHSALRVLRPDGST 195



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 86/265 (32%), Gaps = 30/265 (11%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             +     ++ +   DG     +   R+        S +   +A    +  D +   L  
Sbjct: 130 RSTDEDGTTIHLARGDGGAPAEIYRHRESAGVG-DLSHDGSLIAIEHTEHGDAMHSALRV 188

Query: 244 TRIDRAP------KRIGNFRSMILAPRFSS-NG-KRALISVQKDEAMDIYSVDLQSNATE 295
            R D +        R G     +    F+  +G  R LI  Q+    +    D+ +    
Sbjct: 189 LRPDGSTVAELDDTRGGEEELGLEVLGFAPVDGDTRLLIGHQRRGRWEPLVWDVATGEQT 248

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L   L  ++SA + PD S ++     E + +L+           I      +       
Sbjct: 249 DLALELPGDVSAEWYPDGSGLLIVHGFEARSELFRYDFAERGLTEIDT-PAGTVSGATAR 307

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P G +      + E  A+       +  R++++   L++P      RS+           
Sbjct: 308 PDGSVEYLWSSAAEPSAVR-----STTGRVVLDPPGLKSP------RSV---------PV 347

Query: 416 SKLYSIDLNGRNETLINTPAYASDP 440
             ++     GR   L+  PA A+ P
Sbjct: 348 EDVWVEGPGGRIHALVQKPAGAAGP 372


>gi|253997875|ref|YP_003049938.1| 40-residue YVTN family beta-propeller repeat-containing protein
           [Methylovorus sp. SIP3-4]
 gi|253984554|gb|ACT49411.1| 40-residue YVTN family beta-propeller repeat protein [Methylovorus
           sp. SIP3-4]
          Length = 356

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 62/176 (35%), Gaps = 13/176 (7%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             R+ ++D +  +  + I           FS +GK+ +I+ + D  + ++  ++ +    
Sbjct: 147 PARIAIVDLKKGKKIREIVGGPETEGI-EFSKDGKKLIITNEADNTITVH--NIATGKLL 203

Query: 296 RLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           +   T            SPD    V   +     +  V+       K +   K    +  
Sbjct: 204 KTVKTKEYGERPRGIKVSPDGKTYVATLEFG--NKFVVLDDKFKVLKTVDTGKGP--YGI 259

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFS 407
            +   G  I +   S EK A+ V      S+ + +         +++P  + ++ +
Sbjct: 260 AYDRDGKHI-YVATSKEK-ALEVYDAKTYSKVKSVTTGDRCWHFSFTPDDKQILLA 313


>gi|332216137|ref|XP_003257200.1| PREDICTED: POC1 centriolar protein homolog A isoform 3 [Nomascus
           leucogenys]
          Length = 369

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 78/221 (35%), Gaps = 18/221 (8%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V      +  Y        +    FSP+   +A  + D    +R+++ + + +    R
Sbjct: 5   LMVWHMKPQSRAYRFTGHKDAITCVNFSPSGHLLASGSRD--KTVRIWVPNVKGESTAFR 62

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                + + +  F S+G+   ++   D+ + +++   Q      L+  +     A +SPD
Sbjct: 63  --AHTATVRSVHFCSDGQS-FVTASDDKTVKVWATHRQ-KFLFSLSQHINWVRCAKFSPD 118

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              IV  SD    + + +   +  +      +  +      + P G  IA          
Sbjct: 119 GRLIVSASD---DKTVKLWDKSSRECVHSYCEHGSFVTYVDFHPSGTCIAAAGMDNTVKV 175

Query: 373 IGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRK 409
             V        RLL    +  + +   ++ PSG  LI +  
Sbjct: 176 WDV-----RTHRLLQHYQLHSAAVNGLSFHPSGNYLITASS 211



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 74/261 (28%), Gaps = 33/261 (12%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           ++R   H   D I        G            + SG    ++ +   +         +
Sbjct: 16  AYRFTGHK--DAITCVNFSPSG----------HLLASGSRDKTVRIWVPNVKGESTAFRA 63

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    F  + Q    A+ D      V +  T   +    +    + +   +FS +G
Sbjct: 64  HTATVRSVHFCSDGQSFVTASDDK----TVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 119

Query: 270 KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            R ++S   D+ + ++  D  S                  + P  + I           +
Sbjct: 120 -RLIVSASDDKTVKLW--DKSSRECVHSYCEHGSFVTYVDFHPSGTCIAAAGM---DNTV 173

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V         +  Q   A+     + P G+ +           + +M     + RLL  
Sbjct: 174 KVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITASSDSTLKILDLM-----EGRLLYT 228

Query: 389 DSNLQAPTWSPSGRSLIFSRK 409
               Q P       ++ FSR 
Sbjct: 229 LHGHQGPA-----TTVAFSRT 244


>gi|325123499|gb|ADY83022.1| hypothetical protein BDGL_002436 [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 308

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 82/244 (33%), Gaps = 23/244 (9%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDIL--RVYLMDTRIDRAPKRIGNFR-SMILAPRFSSN 268
                P F     K+ +  Y D +    ++YL +    +      N++   ++   FS +
Sbjct: 22  HAAIAPTF---YGKLVFHRYSDYEAWDSKLYLYNFTTQQTILLGANWKIDHMMNGHFSPD 78

Query: 269 GKRALISVQKDE-----AMDIYSVDLQSNATE-RLTNTLF-INISASYSPDSSQIVFESD 321
           GK               A D+Y   + S      LT      +    +  D+ +I+F   
Sbjct: 79  GKWLTFMGVNSGQHYGDAWDVYVWKVGSTDLPINLTQGNNKRDEDPKFI-DNQRIIF--- 134

Query: 322 REGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +    L +++        ++Q+  +     P        I + K +G    I  + + G
Sbjct: 135 -KQNGDLKIIRMTDRTMTSVTQNGWDIEESMPYPMVNTTQILYAKGAGNNSRIFSIDQSG 193

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI---NTPAYA 437
           + +  L   ++   P W    R L        +   ++Y  D+  +  T +   N     
Sbjct: 194 AYDTQLTNIASYY-PVWWQGSRFLYVRWYSPTNPHDQIYIYDMVNKQTTRLPFNNLNYDT 252

Query: 438 SDPQ 441
           SDP 
Sbjct: 253 SDPA 256


>gi|300937875|ref|ZP_07152668.1| peptidase, S54 family protein [Escherichia coli MS 21-1]
 gi|300457118|gb|EFK20611.1| peptidase, S54 family protein [Escherichia coli MS 21-1]
          Length = 625

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 86/258 (33%), Gaps = 34/258 (13%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T            S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSLI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSV-----DLQSNATERLTNTLFINI 305
              + +        S + K  LI  + + + + I ++     D  +     + + +    
Sbjct: 440 TGTSGKPGAWVMALSPDEKTLLIPGMVRGDIVRINTITHQKEDFPTGDARGVVSAMG--- 496

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              + P + +I+F  D +G  ++ V     S   +      + Y     SP G  +A   
Sbjct: 497 ---FRPKNGEIIFA-DSQGISRISVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVS 550

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +  + + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D   
Sbjct: 551 YGLQGYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT- 602

Query: 426 RNETLINTPAYASDPQWV 443
                ++  A    PQ+ 
Sbjct: 603 ---RSLDPQAIIRHPQYG 617


>gi|302825175|ref|XP_002994220.1| hypothetical protein SELMODRAFT_138356 [Selaginella moellendorffii]
 gi|300137931|gb|EFJ04725.1| hypothetical protein SELMODRAFT_138356 [Selaginella moellendorffii]
          Length = 232

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 35/109 (32%), Gaps = 5/109 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SP    +   S         V   +  +   + +      F   WSP GD +  T   
Sbjct: 7   SWSPCGRLLACGSSE--TPTFAVWDVSLGESTPLRRGMAGVQFMK-WSPLGDYLL-TAKV 62

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
              F +       S+         L    WSP GR ++ +  +    G+
Sbjct: 63  DASFHLWETMTWTSEPWA-SAGGALVGAAWSPDGRMIMGAFDQSSTLGT 110


>gi|291569974|dbj|BAI92246.1| probable peptidase [Arthrospira platensis NIES-39]
          Length = 636

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 15/129 (11%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFSGEKFAIGVMKK 378
             L  +  N  +  +I       Y  P  S  G  + +         + G +  +  + +
Sbjct: 154 NTLISLNLNNPEDIQILATGADFYASPNLSKDGSRLCWICWYHPNMPWDGTELWVAEVTE 213

Query: 379 DGS-QERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           DG+  ++  V     ++   P WSP G  L F   +       LY +  + + E L   P
Sbjct: 214 DGTLDQQKRVAGGVEESIFQPQWSPDGT-LYFVSDRAN--WWNLYRVR-DQKIEPLFPLP 269

Query: 435 AYASDPQWV 443
           A    PQWV
Sbjct: 270 AEFGLPQWV 278



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 42/306 (13%), Positives = 93/306 (30%), Gaps = 45/306 (14%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD-----DIYQSITGE 169
           RV + G     V              G  +FS+ A  R     I+      +I       
Sbjct: 74  RVHEYGGGAYTVS------------EGTVYFSNFADGRIYRQAIASVAQPTEILPEPITP 121

Query: 170 KGDFNSRILFVSESVV-----------SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +G+F    L +                SG   N+L  ++ +      +  +       P 
Sbjct: 122 EGNFRYADLLIDTRRGRLICVREDHSQSGEPVNTLISLNLNNPEDIQILATGADFYASPN 181

Query: 219 FSPNQQKVAYATYDDEDILRV--------YLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            S +  ++ +  +   ++              D  +D+  +  G     I  P++S +G 
Sbjct: 182 LSKDGSRLCWICWYHPNMPWDGTELWVAEVTEDGTLDQQKRVAGGVEESIFQPQWSPDGT 241

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GK 325
                  +    ++Y V  +    E L           +    S   F S R       +
Sbjct: 242 -LYFVSDRANWWNLYRV--RDQKIEPLFPLPAEFGLPQWVFGMSTFGFISQRRLCCAYTQ 298

Query: 326 EQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ + +   + +++ S D   +Y   V      ++     + E  A+  +  +  +  
Sbjct: 299 NGIWSLATLDPETQQLRSFDVSYTYISSVTVQNNSILMLASSATEPTALVELDLNAGEMN 358

Query: 385 LLVEDS 390
           +L   +
Sbjct: 359 VLRSST 364



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 12/133 (9%)

Query: 275 SVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE-----SDREGKEQL 328
           S   +    + S++L +    + L        S + S D S++ +      +      +L
Sbjct: 147 SQSGEPVNTLISLNLNNPEDIQILATGADFYASPNLSKDGSRLCWICWYHPNMPWDGTEL 206

Query: 329 YV--MQSNGS--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
           +V  +  +G+   QKR++   E S F P WSP G  + F       + +  ++ D   E 
Sbjct: 207 WVAEVTEDGTLDQQKRVAGGVEESIFQPQWSPDGT-LYFVSDRANWWNLYRVR-DQKIEP 264

Query: 385 LLVEDSNLQAPTW 397
           L    +    P W
Sbjct: 265 LFPLPAEFGLPQW 277


>gi|258569210|ref|XP_002585349.1| hypothetical protein UREG_06038 [Uncinocarpus reesii 1704]
 gi|237906795|gb|EEP81196.1| hypothetical protein UREG_06038 [Uncinocarpus reesii 1704]
          Length = 619

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 56/138 (40%), Gaps = 9/138 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           V+E +VS     ++ + D   +N          + +    FSP+   +A A++D+     
Sbjct: 370 VTERLVSASDDFTMFLWDPASSNKPIARMLGHQKEVNHVTFSPDGAYIASASFDN----H 425

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
           V L + R  +    +      +    FS++  R L+S  KD  + ++  D+++      L
Sbjct: 426 VKLWNARDGKFISSLRGHVGAVYQCCFSAD-SRLLVSSSKDTTLKVW--DVRTGKLAMDL 482

Query: 298 TNTLFINISASYSPDSSQ 315
                   +  +SPD  +
Sbjct: 483 PGHQDEVYAVDWSPDGEK 500



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 37/271 (13%), Positives = 74/271 (27%), Gaps = 54/271 (19%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + +G   ++  + D D     Y        +    +SPN + +A  + D+     V L 
Sbjct: 160 RMATGSGDSTARIWDCDTGTPVYTLKGHSSWVLVVSWSPNDKILATGSMDN----TVRLW 215

Query: 243 DTRIDRA-PKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSNATER 296
           D    +A    +      I++  +        G+  L S  KD  + I+ V +       
Sbjct: 216 DPNTGQALGAPLKGHSKWIMSLAWEPYHLQEPGRPRLASSSKDSTVRIWDV-VSKRIESV 274

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS- 355
           LT          +    +  ++ S  +  + + +         +              S 
Sbjct: 275 LTGHKGSVSCVRWG--GTGRIYTSSHD--KTIKIWNPKDGSLIQTLSSHTHRVNHLALST 330

Query: 356 -----------------PQGDLIAFTKFS------------------GEKFAIGVMKKDG 380
                               D IA  K                     + F + +     
Sbjct: 331 DFVLRTSFYEHNKVAPESDVDRIATAKQRFEKAATINGKVTERLVSASDDFTMFLWDPAS 390

Query: 381 SQ---ERLLVEDSNLQAPTWSPSGRSLIFSR 408
           S     R+L     +   T+SP G  +  + 
Sbjct: 391 SNKPIARMLGHQKEVNHVTFSPDGAYIASAS 421



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 44/315 (13%), Positives = 85/315 (26%), Gaps = 70/315 (22%)

Query: 111 LVTGRVIKE----GKDRLRVEFRLWDVKDRKQIIG------------------------- 141
           ++               +    RLWD    + +                           
Sbjct: 191 VLVVSWSPNDKILATGSMDNTVRLWDPNTGQALGAPLKGHSKWIMSLAWEPYHLQEPGRP 250

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DG 200
           +   SS  S  +I   +S  I   +TG KG  +      +  + +     ++ + +  DG
Sbjct: 251 RLASSSKDSTVRIWDVVSKRIESVLTGHKGSVSCVRWGGTGRIYTSSHDKTIKIWNPKDG 310

Query: 201 ANIRYLTPS---------------RDQILFEPRFSP--NQQKVAYATYDDEDILRV---- 239
           + I+ L+                 R       + +P  +  ++A A    E    +    
Sbjct: 311 SLIQTLSSHTHRVNHLALSTDFVLRTSFYEHNKVAPESDVDRIATAKQRFEKAATINGKV 370

Query: 240 -------------YLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                        +L D      P  R+   +  +    FS +G     S   D  + ++
Sbjct: 371 TERLVSASDDFTMFLWDPASSNKPIARMLGHQKEVNHVTFSPDGAYIA-SASFDNHVKLW 429

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           +          L   +       +S DS  +V  S       L V               
Sbjct: 430 NA-RDGKFISSLRGHVGAVYQCCFSADSRLLVSSSK---DTTLKVWDVRTGKLAMDLPGH 485

Query: 346 EASYFDPVWSPQGDL 360
           +   +   WSP G+ 
Sbjct: 486 QDEVYAVDWSPDGEK 500


>gi|328719143|ref|XP_003246675.1| PREDICTED: actin-interacting protein 1-like isoform 2
           [Acyrthosiphon pisum]
          Length = 603

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 75/246 (30%), Gaps = 15/246 (6%)

Query: 184 VVSGIIKNSLC-----VMDRDGANIRY--LTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 KN L      V+ RD  N     +       +   ++SP+   +A  + D    
Sbjct: 24  GGDPKGKNFLYTNGNSVIIRDIENPAISDVYTEHSCAVNVAKYSPSGFYIA--SGDQSGK 81

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           +R++    +          F   I    +S + +R ++  +  E      +     +   
Sbjct: 82  IRIWDTVNKEHILKNEFHPFGGPIKDISWSPDNQRMVVVGEGRERFGHVFMAETGTSVGE 141

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T       S  + P     +     +    + V +      K   QD         +SP
Sbjct: 142 ITGQSKPINSCDFRPSRPFRIVTGSED--NTIGVFEGPPFKFKMTKQDHSRFVQAVRFSP 199

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            G+  A   F G+ F       D  S+         +    WS     L+ S    GD  
Sbjct: 200 NGNFFASAGFDGKVFLYEGTNADLVSEIGSPAHKGGVYGVAWSADSTRLLTSS---GDKT 256

Query: 416 SKLYSI 421
            KL+ +
Sbjct: 257 CKLWDV 262



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 95/285 (33%), Gaps = 41/285 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS----------SPASWR---------KI 154
           G  I  G    ++  R+WD  +++ I+  +F            SP + R         + 
Sbjct: 70  GFYIASGDQSGKI--RIWDTVNKEHILKNEFHPFGGPIKDISWSPDNQRMVVVGEGRERF 127

Query: 155 AHTISDDIYQSITGEKG--------DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
            H    +   S+    G        DF     F    +V+G   N++ V +      +  
Sbjct: 128 GHVFMAETGTSVGEITGQSKPINSCDFRPSRPF---RIVTGSEDNTIGVFEGPPFKFKMT 184

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPR 264
                + +   RFSPN    A A +D +    V+L +         IG+   +  +    
Sbjct: 185 KQDHSRFVQAVRFSPNGNFFASAGFDGK----VFLYEGTNADLVSEIGSPAHKGGVYGVA 240

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S++  R L +   D+   ++ V+ +S  +E +      +   S     + ++  S    
Sbjct: 241 WSADSTRLL-TSSGDKTCKLWDVETKSVVSEFVIGNQVEDQQVSCLWQGNYLLTVSLNG- 298

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
               Y+  +N     RI +           SP    I      G 
Sbjct: 299 -FITYLDVNNPEKPIRIIKGHNKPITVLALSPDRSTIYTGSHDGN 342



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 37/121 (30%), Gaps = 3/121 (2%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVF 318
            A   S       +    D  + +Y ++  +   E +   + L      S+SPD   +V 
Sbjct: 442 SAVAISPGAGYVAVGGALDNKVHVYKINESTYNLEFVAECDHLGPITDCSFSPDGEYLV- 500

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD   K  LY +       K+      A      WSP    +A            V   
Sbjct: 501 ASDANRKVILYKVPEFNLAHKQDWGFHLARVNSVAWSPNSKQVASGSLDTTIIVWSVTSP 560

Query: 379 D 379
           +
Sbjct: 561 N 561


>gi|114586910|ref|XP_516464.2| PREDICTED: N-acylaminoacyl-peptide hydrolase isoform 9 [Pan
           troglodytes]
 gi|114586912|ref|XP_001165486.1| PREDICTED: N-acylaminoacyl-peptide hydrolase isoform 3 [Pan
           troglodytes]
 gi|114586914|ref|XP_001165523.1| PREDICTED: N-acylaminoacyl-peptide hydrolase isoform 4 [Pan
           troglodytes]
          Length = 631

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 31/222 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEP 217
           D+I +    ++     + +F  +   + + K+   LCV+D +  NI  L    + +    
Sbjct: 88  DEIARLKKPDQAIKGDQFVFYEDWGENMVSKSIPVLCVLDVESGNISVLEGVPENVSPGQ 147

Query: 218 R-FSPNQQKVAYATYDDEDIL----------RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             ++P    V +  +  E                     I    + + +    + +PR S
Sbjct: 148 AFWAPGDAGVVFVGWWHEPFRLGIRFCTNRRSALYYVDLIGGKCELLSDDSLAVSSPRLS 207

Query: 267 SNGKRALI----SVQKDEA-MDIYSVDLQSNA--------TERLT-NTLFINIS----AS 308
            +  R +     S+        +   D  +            +L  N   I  S      
Sbjct: 208 PDQCRIVYLQYPSLIPHHQCSQLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGC 267

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +S DS ++VF+S +  ++ L+ + +       ++       +
Sbjct: 268 WSADSQRVVFDSAQRSRQDLFAVDTQVGTVTSLTAGGSGGSW 309


>gi|114586906|ref|XP_001165323.1| PREDICTED: N-acylaminoacyl-peptide hydrolase isoform 2 [Pan
           troglodytes]
          Length = 698

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 31/222 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEP 217
           D+I +    ++     + +F  +   + + K+   LCV+D +  NI  L    + +    
Sbjct: 189 DEIARLKKPDQAIKGDQFVFYEDWGENMVSKSIPVLCVLDVESGNISVLEGVPENVSPGQ 248

Query: 218 R-FSPNQQKVAYATYDDEDIL----------RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             ++P    V +  +  E                     I    + + +    + +PR S
Sbjct: 249 AFWAPGDAGVVFVGWWHEPFRLGIRFCTNRRSALYYVDLIGGKCELLSDDSLAVSSPRLS 308

Query: 267 SNGKRALI----SVQKDEA-MDIYSVDLQSNA--------TERLT-NTLFINIS----AS 308
            +  R +     S+        +   D  +            +L  N   I  S      
Sbjct: 309 PDQCRIVYLQYPSLIPHHQCSQLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGC 368

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +S DS ++VF+S +  ++ L+ + +       ++       +
Sbjct: 369 WSADSQRVVFDSAQRSRQDLFAVDTQVGTVTSLTAGGSGGSW 410


>gi|321254780|ref|XP_003193195.1| hypothetical protein CGB_C9250C [Cryptococcus gattii WM276]
 gi|317459664|gb|ADV21408.1| conserved hypothetical protein [Cryptococcus gattii WM276]
          Length = 563

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 71/221 (32%), Gaps = 24/221 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +     Y      D    ++     +    R+G      L       G R ++++ +
Sbjct: 83  WSGDS---MYLLVHSRDAKMAWVYGVAQEGEAARVGGMGVEGLTKVEWGKGDREVLALTE 139

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ-SNGSD 337
            ++  +Y   L S  T  + N        +YSPDS  +       GK+ + V    +G  
Sbjct: 140 IDSR-LYIYSLCSGETRFIQNVKPSPDGYTYSPDSRYLAVTEKHLGKDCIGVYDILDGYS 198

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAP 395
             R             WSP G  IA    S   +++ +    G           +   AP
Sbjct: 199 LLRHFPLLTIDVQGISWSPCGRYIA-AWDSPLSYSLHIHSAIGPHLTHFNPSSPTFSLAP 257

Query: 396 -----------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                       W+P GR +       G    K+  ++ +G
Sbjct: 258 NEVQGLGLRTLAWAPGGRWIAV-----GGWDGKVRIVESDG 293


>gi|156553300|ref|XP_001599598.1| PREDICTED: similar to WD repeat domain 23 [Nasonia vitripennis]
          Length = 570

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 62/178 (34%), Gaps = 10/178 (5%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + +T +    KRI  + +      FS +G   L +      + +Y  D       +  + 
Sbjct: 165 ITNTFLPNQMKRIAKYNNKPFCGTFSKDGNFLL-TTTHHRVLRLYRTDHGEYNEFKKFSV 223

Query: 301 LFINIS---ASYSPDSSQIVFESDREGKEQLYVM-QSNGSDQKRISQDKEAS-YFDPVWS 355
             +  S    ++SPD+   V+ S  +      +    N  +   +S +      F  V+S
Sbjct: 224 SAVGWSILDTAFSPDARYFVYSSWSDYLYMNSIYGDPNVREPLLLSAEHPMFCVFSVVFS 283

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             G  + F    G    + +         ++     ++ +  ++     +++S   DG
Sbjct: 284 SDGREL-FC--GGNDGCLYIYDLGSQNCSKVRGHGYDINSVAFADDSSQILYSAGDDG 338



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 69/191 (36%), Gaps = 15/191 (7%)

Query: 192 SLCVMDRDGANI--RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            L   D    N   ++   +    + +  FSP+ +   Y+++ D   +     D  +   
Sbjct: 206 RLYRTDHGEYNEFKKFSVSAVGWSILDTAFSPDARYFVYSSWSDYLYMNSIYGDPNVREP 265

Query: 250 PKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                      + +  FSS+G+        D    +Y  DL S    ++    +   S +
Sbjct: 266 LLLSAEHPMFCVFSVVFSSDGREL-FCGGNDGC--LYIYDLGSQNCSKVRGHGYDINSVA 322

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++ DSSQI++ +  +G  +++       D++ + +D             G  I F    G
Sbjct: 323 FADDSSQILYSAGDDGLCKVW-------DRRELREDDPQPVGVLAGHMGG--ITFVDPRG 373

Query: 369 EKFAIGVMKKD 379
           +   +    KD
Sbjct: 374 DGRHLITNSKD 384


>gi|312379941|gb|EFR26077.1| hypothetical protein AND_08073 [Anopheles darlingi]
          Length = 314

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 72/184 (39%), Gaps = 16/184 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +SG +  +L + D    N + +     Q+   P  + + + + +A   + + +++
Sbjct: 118 VEDTFLSGSLDKTLRLWDLRSPNCQGVM----QLNGRPVAAYDPEGLIFAAGVNSESIKL 173

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
           Y +   D       K            +FS +GK  LIS        I  +D       +
Sbjct: 174 YDLRSFDKGPFVTFKLNQEKECDWTGLKFSRDGKTILISTN---GSIIRLIDAFHGTPLQ 230

Query: 296 RLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             T   N   I I AS+SPD SQ +F    +G+  ++   + G     ++ D        
Sbjct: 231 TFTGYLNNKGIPIEASFSPD-SQFIFSGSTDGRVHVWNADT-GYKICVLNGDHPGPVQCV 288

Query: 353 VWSP 356
            ++P
Sbjct: 289 QFNP 292


>gi|302537852|ref|ZP_07290194.1| LOW QUALITY PROTEIN: acyl-peptide hydrolase [Streptomyces sp. C]
 gi|302446747|gb|EFL18563.1| LOW QUALITY PROTEIN: acyl-peptide hydrolase [Streptomyces sp. C]
          Length = 665

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/198 (14%), Positives = 62/198 (31%), Gaps = 24/198 (12%)

Query: 185 VSGIIKNSLCVMDRDGAN------IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
             G ++     +  DG+       +R LT  R +    P+ SP+ ++ A+  +D   +  
Sbjct: 158 GPGDLRRVAAAVPLDGSAAGDRSAVRELTDDRHRFRTGPKPSPDGRRAAWLVWDHPRMPW 217

Query: 239 --------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                       D  +      +G     +    ++++G    +S  +    + Y VD  
Sbjct: 218 DGTELELADVRPDGTLGAPRTVLGGPDEAVAQVAWAADGTLLAVS-DRTGWWNPYRVDPD 276

Query: 291 SNATERLTNTLFINISASYSPDSSQIV-------FESDREGKEQLYVMQSNGSDQKRISQ 343
                 L         A + P  + +             +G   L V+  +  D   +  
Sbjct: 277 GGEPVNLCPREEEFGGALWKPGLTWLAPLPEGTVAVLHGQGSSVLGVLDPDTGDL--VDA 334

Query: 344 DKEASYFDPVWSPQGDLI 361
               + + P  +  G  +
Sbjct: 335 AGPWTAWQPALAVSGTRV 352



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/243 (13%), Positives = 70/243 (28%), Gaps = 38/243 (15%)

Query: 181 SESVVSGIIKNSLCVMDRDG----------ANIRYLTPSRDQILFEPRFSPN-QQKVAYA 229
           +E       + +L     DG           N+R        + +     P     V + 
Sbjct: 42  TEPRPEEGGRRTLVRRPADGGAARSVLEAPWNVRSRLTEYGGLPWAGAEQPGRGPLVVFV 101

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS---NGKRALISVQ-------KD 279
            + D+ +             P+ +    ++    R++     G      ++        D
Sbjct: 102 HHADQRLYAYEPDAPGAAAQPRPLTPVSAVGGGLRWADPVLRGGEVWCVLEEFTGPGPGD 161

Query: 280 EAMDIYSVDLQSNAT------ERLTNTLF-INISASYSPDSSQIVF-ESDREGKE----- 326
                 +V L  +A         LT+           SPD  +  +   D          
Sbjct: 162 LRRVAAAVPLDGSAAGDRSAVRELTDDRHRFRTGPKPSPDGRRAAWLVWDHPRMPWDGTE 221

Query: 327 -QLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            +L  ++ +G     + +    + +     W+  G L+A +  +G  +    +  DG + 
Sbjct: 222 LELADVRPDGTLGAPRTVLGGPDEAVAQVAWAADGTLLAVSDRTG-WWNPYRVDPDGGEP 280

Query: 384 RLL 386
             L
Sbjct: 281 VNL 283


>gi|299471480|emb|CBN79966.1| Intraflagellar transport protein 80 [Ectocarpus siliculosus]
          Length = 782

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 72/201 (35%), Gaps = 47/201 (23%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
           TR  R  K++      ++  R+S +G  AL S  +D  + I+S   +S      L  T  
Sbjct: 86  TRAGREEKKVSAHMGAVVCIRWSPDG-SALCSCGEDGDVKIWS---RSGNLRSTLMQTGH 141

Query: 303 INISASYSPDSSQIVFESDRE--------GKEQL-------------------------- 328
              + ++SPDS  +V  + R+        G++QL                          
Sbjct: 142 SLYALAWSPDSESVVVGAGRDLAIKGVQAGRKQLRWPAHEGLVIAVDWNMVNDLLLSGGE 201

Query: 329 ---YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQER 384
              Y +  +   Q   S     +     W P G+  A   F+     + +  K G S  R
Sbjct: 202 DCSYRVWDSFGRQMFQSGGLGYTITSVKWCPNGETFAVGAFN----TLRLCDKTGWSHSR 257

Query: 385 LLVEDSNLQAPTWSPSGRSLI 405
              +  +L + TW+P G  L 
Sbjct: 258 DRPQSGSLTSLTWTPDGTQLA 278


>gi|255070275|ref|XP_002507219.1| predicted protein [Micromonas sp. RCC299]
 gi|226522494|gb|ACO68477.1| predicted protein [Micromonas sp. RCC299]
          Length = 318

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 88/246 (35%), Gaps = 18/246 (7%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +   DGA  R +   + ++     ++ + +++A  + D    +      T + +  +  
Sbjct: 3   ALTFFDGAISREIAGHKKKVHCV-AWNLSGRRLASGSVDQSARVWDVEHGTCLGKELELK 61

Query: 254 GNFRSMILAPRFSS-NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           G+  S+     +   +G R   +V  D+++  + V   SN    + NT   NI+ ++ PD
Sbjct: 62  GHSDSVD-QVCWDPTSGDRLA-TVSGDKSLRAWDVRSGSNCVAAI-NTSGENINLAWHPD 118

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKF 371
              I       G  +  V   +    + +S  K     +   WSP GD I +        
Sbjct: 119 GVTIA-----IGDREDLVSFVDTRKLRVVSVRKFPFEVNEMRWSPDGD-ILWVTTGTGTV 172

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI------FSRKKDGDTGSKLYSIDLNG 425
            +           +    +   A    P GR L            D +  + LY++  +G
Sbjct: 173 EVHAWPSSRKMLSMKAHTAGCYAIDVDPLGRKLAVGGADTLVSMWDTEEYTCLYTVARSG 232

Query: 426 RNETLI 431
           +   ++
Sbjct: 233 KPVRVV 238


>gi|119613094|gb|EAW92688.1| WD repeat domain 1, isoform CRA_c [Homo sapiens]
          Length = 619

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 85/268 (31%), Gaps = 40/268 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTE----HAHQVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 65  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---------GANIRYL 206
                          G+       ++   +       L     D             ++ 
Sbjct: 125 EKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFT 184

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
                + +   RFSP+  + A A+ D     ++Y+ D +       +G  +     I A 
Sbjct: 185 VGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAI 240

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +S +    L S   D+   I+ V + S
Sbjct: 241 SWSPDSTHLL-SASGDKTSKIWDVSVNS 267


>gi|119613095|gb|EAW92689.1| WD repeat domain 1, isoform CRA_d [Homo sapiens]
          Length = 534

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 85/268 (31%), Gaps = 40/268 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTE----HAHQVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 65  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---------GANIRYL 206
                          G+       ++   +       L     D             ++ 
Sbjct: 125 EKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFT 184

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
                + +   RFSP+  + A A+ D     ++Y+ D +       +G  +     I A 
Sbjct: 185 VGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAI 240

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +S +    L S   D+   I+ V + S
Sbjct: 241 SWSPDSTHLL-SASGDKTSKIWDVSVNS 267


>gi|2982616|emb|CAA06154.1| arcA 3 [Nicotiana tabacum]
          Length = 290

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 72/215 (33%), Gaps = 18/215 (8%)

Query: 193 LCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  + +DG      R         + +   S +       ++D E    + L D +    
Sbjct: 8   VWSLTKDGPQYGVPRRRLTGHGHFVQDVVLSSDGMFALSGSWDGE----LRLWDLQAGTT 63

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS- 308
            +R       +L+  FS + ++ + S  +D+ + ++  +        +T+    +   S 
Sbjct: 64  ARRFVGHTKDVLSVAFSIDNRQIV-SASRDKTIKLW--NTLGECKYTITDGDSHSDWVSC 120

Query: 309 --YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             +SP++ Q    S       + +        +               SP G L A    
Sbjct: 121 VRFSPNNLQPTIVSG-SWDRTVKIWNLTNCKLRSTLAGHSGYVNTVAVSPDGSLCA---S 176

Query: 367 SGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPS 400
            G+   I +    +G +   L   S + +  +SP+
Sbjct: 177 GGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPN 211



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 62/192 (32%), Gaps = 26/192 (13%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                 E RLWD++       ++F         +A +I +         +    SR   +
Sbjct: 46  SGSWDGELRLWDLQAGT--TARRFVGHTKDVLSVAFSIDN--------RQIVSASRDKTI 95

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 G  K ++     DG        S    +   RFSPN  +    +   +  ++++
Sbjct: 96  KLWNTLGECKYTIT----DG-------DSHSDWVSCVRFSPNNLQPTIVSGSWDRTVKIW 144

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +    +    +      +     S +G     S  KD  + ++ +  +      L   
Sbjct: 145 --NLTNCKLRSTLAGHSGYVNTVAVSPDGSLCA-SGGKDGVILLWDL-AEGKKLYSLEAG 200

Query: 301 LFINISASYSPD 312
             I+ S  +SP+
Sbjct: 201 SIIH-SLCFSPN 211


>gi|260061323|ref|YP_003194403.1| gluconolactonase [Robiginitalea biformata HTCC2501]
 gi|88785455|gb|EAR16624.1| gluconolactonase precursor [Robiginitalea biformata HTCC2501]
          Length = 297

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 67/223 (30%), Gaps = 25/223 (11%)

Query: 165 SITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSP 221
            +T  +G   + I F  +    V+  +++ +  +   G A   +    R     +    P
Sbjct: 76  YLTLPEGSVGNGIAFGPDGHMYVADYVRHRVYRVPAGGDAPEVWAEDDRMNQPNDLCVHP 135

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +     Y +  +       L   R DR  + + +          S N +   ++     A
Sbjct: 136 DGS--VYLSDPNWSDNTGNLWRVRPDRTVELLESGMGTTNGIALSPNQRYLYVNESVQRA 193

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           +  Y +D       +     F +    +  D  +     DR G   LYV + +      +
Sbjct: 194 IWRYDMDPGGGVRNKTLFHKFED----FGLDGMRC----DRAGN--LYVARYDKGTVVVL 243

Query: 342 SQDK----EASYFDPVWS------PQGDLIAFTKFSGEKFAIG 374
           S D     E        S      P G  +  T      F + 
Sbjct: 244 SPDGGVLKEYRLSGKKPSNLTFAGPDGKTVYVTLADRGCFEVF 286


>gi|322786616|gb|EFZ13011.1| hypothetical protein SINV_13164 [Solenopsis invicta]
          Length = 510

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 65/179 (36%), Gaps = 22/179 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---------ISA 307
           +S +   RFS +G+  + +   D  ++++  +  +    +       +         +S 
Sbjct: 214 KSHVECARFSPDGQYLV-TGSVDGFIEVW--NFTTGKIRKDLKYQAQDNFMMMEQAVLSM 270

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++S DS  +     ++GK +++ +  +G   +R  +          +S     I  T F 
Sbjct: 271 AFSRDSEMLA-GGGQDGKIKVWRV-QSGQCLRRFEKAHSKGVTCLQFSRDNSQILSTSFD 328

Query: 368 GEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                I +      +         S +    +SP G ++I +     D   K++S+   
Sbjct: 329 TT---IRIHGLKSGKTLKEFRGHSSFVNEVIFSPDGHNIISASS---DGTVKIWSLKTT 381


>gi|320160578|ref|YP_004173802.1| hypothetical protein ANT_11680 [Anaerolinea thermophila UNI-1]
 gi|319994431|dbj|BAJ63202.1| hypothetical protein ANT_11680 [Anaerolinea thermophila UNI-1]
          Length = 537

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 88/278 (31%), Gaps = 61/278 (21%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN-QQKVAYATYDDEDILRV 239
             S   G   N+L +++   +  + +      I+    + P     + Y+T +       
Sbjct: 232 RSSTEPGKEINTLWMLNLTDSEAQPVNLRAKNIIHFADWVPGQGLSITYSTVEPRTTAPG 291

Query: 240 Y----------------LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +                +++T         G F        +S +G     +    +   
Sbjct: 292 WQANNDLVLTRYSPSGIILETTTLVEANYGGAFGWWGTQFAWSPDGALLAYA----QPNV 347

Query: 284 IYSVDLQSNATERLT--------NTLFINISASYSPDSSQIVFE---SDREGKEQ----- 327
           +  V+L++     L         +      + ++SP+  Q+++    + R G++      
Sbjct: 348 VGLVNLETGELTPLIKITPYQTRSDWAWVPALAWSPN-HQVLYTLTHAPRPGQDNAETSP 406

Query: 328 ---LYVMQSNGSDQKRISQDKEASYFDPVWSP---QGDL-IAFTKF------SGEKFAIG 374
              L     N     +I  +K   +  PV SP    G   +A+            ++ + 
Sbjct: 407 YFDLSAYIVNSGTLIKIV-EKSGMFSYPVVSPRNTDGSYQVAYLNNISSEQGDSGRYRLA 465

Query: 375 VMKKDGSQERLLVE-----DSNLQAPTWSP----SGRS 403
           VM +DGS  + +         + Q   WSP     G  
Sbjct: 466 VMDRDGSNNQQVFPEEGKLGLDPQEVVWSPEPFEDGTY 503



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 93/306 (30%), Gaps = 60/306 (19%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRA 249
            +M+ +  N R L  S D        SPN++ + +         ++I  +++++     A
Sbjct: 195 WLMEGNTGNRRPLVTSGDLDGRIFSLSPNKEWLLFTRRSSTEPGKEINTLWMLNLTDSEA 254

Query: 250 PKRIGNFRSMILAPRFSSN-GKRALISV----------QKDEAMDIYSVDLQSNATERLT 298
                  +++I    +    G     S           Q +  + +          E  T
Sbjct: 255 QPVNLRAKNIIHFADWVPGQGLSITYSTVEPRTTAPGWQANNDLVLTRYSPSGIILETTT 314

Query: 299 --------NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-------SQ 343
                      +     ++SPD + + +         + ++     +   +       ++
Sbjct: 315 LVEANYGGAFGWWGTQFAWSPDGALLAYA----QPNVVGLVNLETGELTPLIKITPYQTR 370

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEK----------FAI--GVMKKDGSQERLLVEDSN 391
              A      WSP   ++     +             F +   ++   G+  +++ +   
Sbjct: 371 SDWAWVPALAWSPNHQVLYTLTHAPRPGQDNAETSPYFDLSAYIVN-SGTLIKIVEKSGM 429

Query: 392 LQAPTWSP---SGRS-LIF----SRKKDGDTGSKLYSIDLNGR-NETLINTPAYAS-DPQ 441
              P  SP    G   + +    S ++      +L  +D +G  N+ +         DPQ
Sbjct: 430 FSYPVVSPRNTDGSYQVAYLNNISSEQGDSGRYRLAVMDRDGSNNQQVFPEEGKLGLDPQ 489

Query: 442 ---WVG 444
              W  
Sbjct: 490 EVVWSP 495


>gi|258648579|ref|ZP_05736048.1| OmpA family protein [Prevotella tannerae ATCC 51259]
 gi|260851358|gb|EEX71227.1| OmpA family protein [Prevotella tannerae ATCC 51259]
          Length = 691

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 65/193 (33%), Gaps = 30/193 (15%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE----- 326
              S + ++        L+        NT F   + +++P  +++     RE  +     
Sbjct: 201 IYFSKKDEKGKWKLPEPLEGGV-----NTNFDEGACAFNPSGTKMYLTVCREDPQYPRLA 255

Query: 327 QLY---VMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVM-- 376
           +++      +  S   ++  + D  +SY  P  SP  D I F       +    I     
Sbjct: 256 EIWESTRSDAAWSKPTQLKLTSDTLSSYAHPAISPNEDFIYFASDMPGGYGGLDIWRASF 315

Query: 377 --KKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGD--TGSKLYSIDLNGRNE- 428
                G  E L   +    N   P + P+G  L F+         G  LY    +  +  
Sbjct: 316 NSHGTGPVENLGPSINTAGNECFPAFRPNGE-LYFASDGQSPNFGGLDLYRATEDSIHHS 374

Query: 429 -TLINTPAYASDP 440
             +I+ PA  + P
Sbjct: 375 WNVIHLPAPMNSP 387


>gi|256020608|ref|ZP_05434473.1| hypothetical protein ShiD9_16951 [Shigella sp. D9]
 gi|332281798|ref|ZP_08394211.1| peptidase [Shigella sp. D9]
 gi|332104150|gb|EGJ07496.1| peptidase [Shigella sp. D9]
          Length = 625

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T       F    S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSFI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+        +I  ++  ++  E            +  +
Sbjct: 440 TGTSGKPGAWVMALSPDERTLLVPGA--GRGNIVRINTITHQKEDFPAGDARGTISAMRF 497

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ V     S   +      + Y     SP G  +A   +  +
Sbjct: 498 RPENGEVIFA-DSQGISRISVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 554

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 555 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 603

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 604 SLDPQAIIRHPQYG 617


>gi|238506020|ref|XP_002384212.1| eukaryotic translation initiation factor subunit eIF2A, putative
           [Aspergillus flavus NRRL3357]
 gi|220690326|gb|EED46676.1| eukaryotic translation initiation factor subunit eIF2A, putative
           [Aspergillus flavus NRRL3357]
          Length = 682

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 72/230 (31%), Gaps = 32/230 (13%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V  S  S   + +L ++   G     +   ++  + +  +SPN ++             +
Sbjct: 263 VDRSGKSYYGETTLYLLGATGGFDSRVDLDKEGPIHDVTWSPNSREFGVVYGYMPAKTTI 322

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  LAPR    FS +G+  L++   + A  +   DL+ N  +
Sbjct: 323 FNF---------RGVPQHSFALAPRNTISFSPHGRFVLVAGFGNLAGQMDIYDLEKNYFK 373

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSD---------------- 337
             T          +SPD   I     S R   +    +                      
Sbjct: 374 IATVEASNASVCEWSPDGKYILTATTSPRLRVDNGVRLWHVSGALVYNEEMHELYDVFWR 433

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLL 386
            +  +Q      F P+ +P    +A+           G  +  G++ +L 
Sbjct: 434 PQSTTQHPLGDPFHPLPTPHPSAVAYLSTRKAPVKPAGAYRPPGARGQLT 483



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 68/213 (31%), Gaps = 23/213 (10%)

Query: 227 AYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD------ 279
            +          V + M  +      +   F+   +  +++++G   L+  Q D      
Sbjct: 209 VFVPERKGQPAAVKVFMVPQFGAPVSQKTFFKGDKVQLKWNASGTTLLVLAQTDVDRSGK 268

Query: 280 ---EAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQS 333
                  +Y +        R+  +        ++SP+S +   V+     G         
Sbjct: 269 SYYGETTLYLLGATGGFDSRVDLDKEGPIHDVTWSPNSREFGVVY-----GYMPAKTTIF 323

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNL 392
           N     + S    A      +SP G  +    F      + +   + +  ++   E SN 
Sbjct: 324 NFRGVPQHSFAL-APRNTISFSPHGRFVLVAGFGNLAGQMDIYDLEKNYFKIATVEASNA 382

Query: 393 QAPTWSPSGRSLIFSRKKDG---DTGSKLYSID 422
               WSP G+ ++ +        D G +L+ + 
Sbjct: 383 SVCEWSPDGKYILTATTSPRLRVDNGVRLWHVS 415


>gi|153939723|ref|YP_001391036.1| hypothetical protein CLI_1776 [Clostridium botulinum F str.
           Langeland]
 gi|152935619|gb|ABS41117.1| hypothetical protein CLI_1776 [Clostridium botulinum F str.
           Langeland]
 gi|295319092|gb|ADF99469.1| hypothetical protein CBF_1758 [Clostridium botulinum F str. 230613]
          Length = 1485

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 22/144 (15%)

Query: 304 NISASYSPDSSQI------VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           N + + S + S        V+  +   K  LY     G    +IS DK            
Sbjct: 345 NTAGNISNNGSAAMDLDFYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINVI----- 399

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           GD I ++ ++     I  MKKDG+++++L +D+         SG  + ++ + D     +
Sbjct: 400 GDWIYYSNYNDNG-KIYKMKKDGTKKQILCDDTATYITV---SGGVVYYANQSD---KGR 452

Query: 418 LYSIDLNGRNETLINTPAYASDPQ 441
           LY I+ +G     I+      DP 
Sbjct: 453 LYKINTDGT----IDGGTSNRDPA 472



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 71/222 (31%), Gaps = 41/222 (18%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y  Y +          T   R   +I   ++  +       G     S   ++   IY 
Sbjct: 362 FYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINV----IGDWIYYS-NYNDNGKIYK 416

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +       + L      + +A+Y   S  +V+ +++  K +LY + ++G      + D  
Sbjct: 417 MKKDGTKKQIL-----CDDTATYITVSGGVVYYANQSDKGRLYKINTDG------TIDGG 465

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  DP               G+   + VM  D        + +N         G  + +
Sbjct: 466 TSNRDPA--------------GKVHGMPVMD-DYGNYNKATDQANFINVV----GDWIYY 506

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT---PAYASDPQWVGF 445
           S   DG    K+Y+++ +G     +N            W  +
Sbjct: 507 SNFSDGH---KIYTVNKDGNIRRKVNDEWADGIQIVGAWAYY 545


>gi|74004728|ref|XP_535933.2| PREDICTED: similar to Dipeptidyl peptidase 4 (Dipeptidyl peptidase
           IV) (DPP IV) (T-cell activation antigen CD26) (TP103)
           (Adenosine deaminase complexing protein-2) (ADABP)
           [Canis familiaris]
          Length = 755

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 46/134 (34%), Gaps = 28/134 (20%)

Query: 264 RFSSNGKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFI--NISA-SYSPDSSQIV 317
             S +G+  L+      +       S D+      +L     I  N    ++SP+  ++ 
Sbjct: 96  SVSPDGQFILLEYNYVKQWRHSYTASYDIYDLKKRQLITAEKIPNNTQWITWSPEGHKLA 155

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEAS------------------YFDPVWSPQGD 359
           +         +YV        +RI+ + + +                  Y    WSP+G 
Sbjct: 156 YV----WNNDVYVKNEPNISSQRITWNGKENVIYNGITDWVYEEEVFSAYSALWWSPKGT 211

Query: 360 LIAFTKFSGEKFAI 373
            +A+ +F+  +  +
Sbjct: 212 FLAYAQFNDTEVPL 225


>gi|169779960|ref|XP_001824444.1| eukaryotic translation initiation factor 2A [Aspergillus oryzae
           RIB40]
 gi|83773184|dbj|BAE63311.1| unnamed protein product [Aspergillus oryzae]
          Length = 664

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 72/230 (31%), Gaps = 32/230 (13%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V  S  S   + +L ++   G     +   ++  + +  +SPN ++             +
Sbjct: 245 VDRSGKSYYGETTLYLLGATGGFDSRVDLDKEGPIHDVTWSPNSREFGVVYGYMPAKTTI 304

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  LAPR    FS +G+  L++   + A  +   DL+ N  +
Sbjct: 305 FNF---------RGVPQHSFALAPRNTISFSPHGRFVLVAGFGNLAGQMDIYDLEKNYFK 355

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSD---------------- 337
             T          +SPD   I     S R   +    +                      
Sbjct: 356 IATVEASNASVCEWSPDGKYILTATTSPRLRVDNGVRLWHVSGALVYNEEMHELYDVFWR 415

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLL 386
            +  +Q      F P+ +P    +A+           G  +  G++ +L 
Sbjct: 416 PQSTTQHPLGDPFHPLPTPHPSAVAYLSTRKAPVKPAGAYRPPGARGQLT 465



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 68/213 (31%), Gaps = 23/213 (10%)

Query: 227 AYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD------ 279
            +          V + M  +      +   F+   +  +++++G   L+  Q D      
Sbjct: 191 VFVPERKGQPAAVKVFMVPQFGAPVSQKTFFKGDKVQLKWNASGTTLLVLAQTDVDRSGK 250

Query: 280 ---EAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQS 333
                  +Y +        R+  +        ++SP+S +   V+     G         
Sbjct: 251 SYYGETTLYLLGATGGFDSRVDLDKEGPIHDVTWSPNSREFGVVY-----GYMPAKTTIF 305

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNL 392
           N     + S    A      +SP G  +    F      + +   + +  ++   E SN 
Sbjct: 306 NFRGVPQHSFAL-APRNTISFSPHGRFVLVAGFGNLAGQMDIYDLEKNYFKIATVEASNA 364

Query: 393 QAPTWSPSGRSLIFSRKKDG---DTGSKLYSID 422
               WSP G+ ++ +        D G +L+ + 
Sbjct: 365 SVCEWSPDGKYILTATTSPRLRVDNGVRLWHVS 397


>gi|328719145|ref|XP_001943831.2| PREDICTED: actin-interacting protein 1-like isoform 1
           [Acyrthosiphon pisum]
          Length = 604

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/246 (16%), Positives = 75/246 (30%), Gaps = 15/246 (6%)

Query: 184 VVSGIIKNSLC-----VMDRDGANIRY--LTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
                 KN L      V+ RD  N     +       +   ++SP+   +A  + D    
Sbjct: 24  GGDPKGKNFLYTNGNSVIIRDIENPAISDVYTEHSCAVNVAKYSPSGFYIA--SGDQSGK 81

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           +R++    +          F   I    +S + +R ++  +  E      +     +   
Sbjct: 82  IRIWDTVNKEHILKNEFHPFGGPIKDISWSPDNQRMVVVGEGRERFGHVFMAETGTSVGE 141

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           +T       S  + P     +     +    + V +      K   QD         +SP
Sbjct: 142 ITGQSKPINSCDFRPSRPFRIVTGSED--NTIGVFEGPPFKFKMTKQDHSRFVQAVRFSP 199

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            G+  A   F G+ F       D  S+         +    WS     L+ S    GD  
Sbjct: 200 NGNFFASAGFDGKVFLYEGTNADLVSEIGSPAHKGGVYGVAWSADSTRLLTSS---GDKT 256

Query: 416 SKLYSI 421
            KL+ +
Sbjct: 257 CKLWDV 262



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 50/285 (17%), Positives = 95/285 (33%), Gaps = 41/285 (14%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS----------SPASWR---------KI 154
           G  I  G    ++  R+WD  +++ I+  +F            SP + R         + 
Sbjct: 70  GFYIASGDQSGKI--RIWDTVNKEHILKNEFHPFGGPIKDISWSPDNQRMVVVGEGRERF 127

Query: 155 AHTISDDIYQSITGEKG--------DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
            H    +   S+    G        DF     F    +V+G   N++ V +      +  
Sbjct: 128 GHVFMAETGTSVGEITGQSKPINSCDFRPSRPF---RIVTGSEDNTIGVFEGPPFKFKMT 184

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPR 264
                + +   RFSPN    A A +D +    V+L +         IG+   +  +    
Sbjct: 185 KQDHSRFVQAVRFSPNGNFFASAGFDGK----VFLYEGTNADLVSEIGSPAHKGGVYGVA 240

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S++  R L +   D+   ++ V+ +S  +E +      +   S     + ++  S    
Sbjct: 241 WSADSTRLL-TSSGDKTCKLWDVETKSVVSEFVIGNQVEDQQVSCLWQGNYLLTVSLNG- 298

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
               Y+  +N     RI +           SP    I      G 
Sbjct: 299 -FITYLDVNNPEKPIRIIKGHNKPITVLALSPDRSTIYTGSHDGN 342



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 38/122 (31%), Gaps = 4/122 (3%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVF 318
            A   S       +    D  + +Y ++  +   E +   + L      S+SPD   +V 
Sbjct: 442 SAVAISPGAGYVAVGGALDNKVHVYKINESTYNLEFVAECDHLGPITDCSFSPDGEYLV- 500

Query: 319 ESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            SD   K  LY +   N    K+      A      WSP    +A            V  
Sbjct: 501 ASDANRKVILYKVPEFNSLAHKQDWGFHLARVNSVAWSPNSKQVASGSLDTTIIVWSVTS 560

Query: 378 KD 379
            +
Sbjct: 561 PN 562


>gi|322788593|gb|EFZ14220.1| hypothetical protein SINV_02397 [Solenopsis invicta]
          Length = 516

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/236 (15%), Positives = 78/236 (33%), Gaps = 16/236 (6%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           NS+ + + D   I  +       +   ++SP+   +A  + D    +R++    +     
Sbjct: 36  NSVIIRNIDNPAIADVYTEHSCPVNVAKYSPSGFYIA--SGDQSGKVRIWDTVNKEHILK 93

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASY 309
                    I    +S + +R ++  +  E      +     +   ++  +  IN S  +
Sbjct: 94  NEFHPIGGPIKDIAWSPDSQRMVVVGEGRERFGHVFMAETGTSVGEISGQSKSIN-SCDF 152

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P     +     +    + + +      K   Q+         +SP G+L A   F G+
Sbjct: 153 RPARPFRLITGSED--NTIGIFEGPPFKFKMTKQEHTRFVQTVRYSPDGNLFASGGFDGK 210

Query: 370 KFAIGVMKKDGSQER----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            F   +     S              +    W P G+ L+ +    GD   KL+ +
Sbjct: 211 VF---IYNGTTSDFVGEIGSPAHQGGVYGVAWKPDGKQLLTAS---GDKTCKLWDV 260



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 73/207 (35%), Gaps = 35/207 (16%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS----------SPASWR---------KI 154
           G  I  G    +V  R+WD  +++ I+  +F            SP S R         + 
Sbjct: 68  GFYIASGDQSGKV--RIWDTVNKEHILKNEFHPIGGPIKDIAWSPDSQRMVVVGEGRERF 125

Query: 155 AHTISDDIYQSITGEKGDFNSRIL-----FVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            H    +   S+    G   S             +++G   N++ + +      +     
Sbjct: 126 GHVFMAETGTSVGEISGQSKSINSCDFRPARPFRLITGSEDNTIGIFEGPPFKFKMTKQE 185

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSS 267
             + +   R+SP+    A   +D +    V++ +         IG+   +  +    +  
Sbjct: 186 HTRFVQTVRYSPDGNLFASGGFDGK----VFIYNGTTSDFVGEIGSPAHQGGVYGVAWKP 241

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT 294
           +GK+ L +   D+   ++  D+++ + 
Sbjct: 242 DGKQLL-TASGDKTCKLW--DVETRSL 265


>gi|307212148|gb|EFN88002.1| Fizzy-related protein-like protein [Harpegnathos saltator]
          Length = 493

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 73/247 (29%), Gaps = 33/247 (13%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR---------FSPNQQK 225
           SRI F             L ++D    N+  +       L+             S +   
Sbjct: 172 SRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSSDGNS 231

Query: 226 VAYATYDDEDIL--------RVYLMDTRIDRAPKRIGNFRSMILAPRFS----SNGKRAL 273
           V    +++   L         + + D  +++   ++    + + A  ++    S+G R  
Sbjct: 232 VTSVAWNERGNLVAVGTHMGYIQVWDVGVNKQVSKLQGHSARVGALAWNGEVLSSGSRDR 291

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQ 332
           + +Q+D                RL           +SPD+  +       G   +LYV  
Sbjct: 292 LILQRDVRTPCVV------GERRLGAHRQEVCGLKWSPDNQYLA----SGGNDNRLYVWN 341

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSN 391
            +     +   +  A+     WSP    +  +        I       G   + +   S 
Sbjct: 342 LHSLSPIQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQSVDTGSQ 401

Query: 392 LQAPTWS 398
           +    WS
Sbjct: 402 VCNLAWS 408



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/157 (14%), Positives = 53/157 (33%), Gaps = 6/157 (3%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASY 309
           +R+G  R  +   ++S + +             +Y  +L S +  +  T  L    + ++
Sbjct: 307 RRLGAHRQEVCGLKWSPDNQYLA---SGGNDNRLYVWNLHSLSPIQTYTEHLAAVKAIAW 363

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSG 368
           SP     +  S     ++     +  + Q   S D  +   +  WS     +  T  +S 
Sbjct: 364 SPH-HHGLLASGGGTADRCIRFWNTLTGQPMQSVDTGSQVCNLAWSKHSSELVSTHGYSQ 422

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +  +          +L      +     SP G +++
Sbjct: 423 NQILVWKYPSLTQVAKLTGHSYRVLYLAMSPDGEAIV 459



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 5/145 (3%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           ++SP+ Q +A       +  R+Y+ +       +      + + A  +S +    L S  
Sbjct: 320 KWSPDNQYLA----SGGNDNRLYVWNLHSLSPIQTYTEHLAAVKAIAWSPHHHGLLASGG 375

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 I   +  +    +  +T     + ++S  SS++V  +    + Q+ V +     
Sbjct: 376 GTADRCIRFWNTLTGQPMQSVDTGSQVCNLAWSKHSSELV-STHGYSQNQILVWKYPSLT 434

Query: 338 QKRISQDKEASYFDPVWSPQGDLIA 362
           Q                SP G+ I 
Sbjct: 435 QVAKLTGHSYRVLYLAMSPDGEAIV 459


>gi|260866804|ref|YP_003233206.1| rhomboid family protein [Escherichia coli O111:H- str. 11128]
 gi|257763160|dbj|BAI34655.1| rhomboid family protein [Escherichia coli O111:H- str. 11128]
          Length = 625

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T       F    S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSFI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+        +I  ++  ++  E            +  +
Sbjct: 440 TGTSGKPGAWVMALSPDERTLLVPGA--GRGNIVRINTITHQKEDFPAGDARGTISAMRF 497

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ V     S   +      + Y     SP G  +A   +  +
Sbjct: 498 RPENGEVIFA-DSQGISRISVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 554

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 555 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 603

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 604 SLDPQAIIRHPQYG 617


>gi|239944050|ref|ZP_04695987.1| putative peptidase [Streptomyces roseosporus NRRL 15998]
 gi|239990505|ref|ZP_04711169.1| putative peptidase [Streptomyces roseosporus NRRL 11379]
 gi|291447518|ref|ZP_06586908.1| peptidase [Streptomyces roseosporus NRRL 15998]
 gi|291350465|gb|EFE77369.1| peptidase [Streptomyces roseosporus NRRL 15998]
          Length = 708

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/212 (15%), Positives = 64/212 (30%), Gaps = 32/212 (15%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------- 264
             + +PR SP+ + +AY       ++       R    P+       +            
Sbjct: 132 GPVIDPRPSPDGRHIAYVAKGALRVVDATGEGDRALAEPEDPQVTYGLAEFIAAEEMHRH 191

Query: 265 ----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S    R L++ + DE              ER    +    + +  PD+   +F  
Sbjct: 192 RGFWWSPESDRLLVA-RADENPVQRWYIADPAHPERRPAEVAYPAAGT--PDAEVRLFVM 248

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-MKKD 379
           D EG     V            ++         WS  G  +   +   ++    + +  +
Sbjct: 249 DLEGARTEVVWD----------REAFPYLAQVHWSSAGAPLLLVQARDQRSQRYLAVDPE 298

Query: 380 GSQERLLVEDSN-------LQAPTWSPSGRSL 404
               R++  D +          P W+P GR +
Sbjct: 299 TGATRIVHVDEDPVWLDLFPGVPAWAPDGRLV 330


>gi|271966968|ref|YP_003341164.1| hypothetical protein Sros_5672 [Streptosporangium roseum DSM 43021]
 gi|270510143|gb|ACZ88421.1| hypothetical protein Sros_5672 [Streptosporangium roseum DSM 43021]
          Length = 411

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 72/216 (33%), Gaps = 24/216 (11%)

Query: 218 RFSPNQQKVAYATYDDEDI--LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
             SP+   VA A   D+ +   RV   +        R G  ++      FS +GK  +  
Sbjct: 168 AVSPDGSLVAAAGRFDQQVIAWRVPGPERLWAAGSWRTGTEKAGYSHIGFSGDGKLIVAV 227

Query: 276 VQKDEAMD-----IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                  +     +   D ++      T    +   A      +++      +G   +Y 
Sbjct: 228 SSASPYDETAERHVVVADAETGDVT-FTTAAVVTGRAVLDHSGTRLALI-GPDGDVLVYR 285

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           +  +G    R       +      SP+GD +A     G       M+  G     ++ + 
Sbjct: 286 L-PDGELVARHRTALPGTD-ALALSPEGDTVAVGGDGG-------MELLGRSTGRVLAEG 336

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             QA TWSP G   +F+ ++          ID  GR
Sbjct: 337 TCQAMTWSPDGPRALFTSEEAAT------VIDGQGR 366


>gi|170757492|ref|YP_001781331.1| hypothetical protein CLD_2857 [Clostridium botulinum B1 str. Okra]
 gi|169122704|gb|ACA46540.1| hypothetical protein CLD_2857 [Clostridium botulinum B1 str. Okra]
          Length = 1485

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 22/144 (15%)

Query: 304 NISASYSPDSSQI------VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           N + + S + S        V+  +   K  LY     G    +IS DK            
Sbjct: 345 NTAGNISNNGSAAMDLDFYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINVI----- 399

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           GD I ++ ++     I  MKKDG+++++L +D+         SG  + ++ + D     +
Sbjct: 400 GDWIYYSNYNDNG-KIYKMKKDGTKKQILCDDTATYITV---SGGVVYYANQSD---KGR 452

Query: 418 LYSIDLNGRNETLINTPAYASDPQ 441
           LY I+ +G     I+      DP 
Sbjct: 453 LYKINTDGT----IDGGTSNRDPA 472



 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 71/222 (31%), Gaps = 41/222 (18%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            Y  Y +          T   R   +I   ++  +       G     S   ++   IY 
Sbjct: 362 FYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINV----IGDWIYYS-NYNDNGKIYK 416

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +       + L      + +A+Y   S  +V+ +++  K +LY + ++G      + D  
Sbjct: 417 MKKDGTKKQIL-----CDDTATYITVSGGVVYYANQSDKGRLYKINTDG------TIDGG 465

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            S  DP               G+   + VM  D        + +N         G  + +
Sbjct: 466 TSNRDPA--------------GKVHGMPVMD-DYDNYNKATDQANFINVV----GDWIYY 506

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINT---PAYASDPQWVGF 445
           S   DG    K+Y+++ +G     +N            W  +
Sbjct: 507 SNFSDGH---KIYTVNKDGNIRRKVNDEWADGIQIVGAWAYY 545


>gi|15225344|ref|NP_179623.1| transducin family protein / WD-40 repeat family protein
           [Arabidopsis thaliana]
 gi|13605895|gb|AAK32933.1|AF367346_1 At2g20330/F11A3.12 [Arabidopsis thaliana]
 gi|16226753|gb|AAL16252.1|AF428322_1 At2g20330/F11A3.12 [Arabidopsis thaliana]
 gi|4512702|gb|AAD21755.1| putative WD-40 repeat protein [Arabidopsis thaliana]
 gi|22137162|gb|AAM91426.1| At2g20330/F11A3.12 [Arabidopsis thaliana]
 gi|330251900|gb|AEC06994.1| WD40 domain-containing protein [Arabidopsis thaliana]
          Length = 648

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 91/266 (34%), Gaps = 25/266 (9%)

Query: 183 SVVSGIIKNSLCVMDRDGAN-----IRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDI 236
            V+SG    ++ + D  G N      R + PS    +    +SP + Q +         I
Sbjct: 191 RVLSGSYDYTVRMYDFQGMNSRLQSFRQIEPSEGHQVRSVSWSPTSGQFLCVTGSAQAKI 250

Query: 237 LRVYLMDTR----IDRAPKRIGNFRSMI---LAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                +        D   + + N +  I       +    K  +++  +D ++ I+ V+ 
Sbjct: 251 FDRDGLTLGEFMKGDMYIRDLKNTKGHICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNN 310

Query: 290 QSNATERL-----TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             + T+ +             + ++  D  +I      +G  Q++ ++     +  I   
Sbjct: 311 FLSQTQVIKPKLARPGRVPVTTCAWDRDGKRIA-GGVGDGSIQIWSLKPGWGSRPDIYVG 369

Query: 345 KEASY--FDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           K  +       +S  G ++    F G  + + +  MK+       L          +SP 
Sbjct: 370 KAHTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPD 429

Query: 401 GRSLI--FSRKKDGDTGSKLYSIDLN 424
            + ++   S +KD  TG  L   D  
Sbjct: 430 EQIILTGTSVEKDSTTGGLLCFYDRT 455


>gi|21226145|ref|NP_632067.1| hypothetical protein MM_0043 [Methanosarcina mazei Go1]
 gi|20904371|gb|AAM29739.1| conserved protein [Methanosarcina mazei Go1]
          Length = 880

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 74/209 (35%), Gaps = 17/209 (8%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V ++DT       ++   RSM      + +GK+      +   +++  VD  +N      
Sbjct: 480 VSVIDTATGLVITKVKVGRSMPEGVAVTPDGKK-AYVPDRWG-VNVSVVDTATNTVIDTV 537

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                    + SPD  + V+ ++  G   + ++ ++ ++    +     S       P G
Sbjct: 538 KVGSDPYGVAISPDGKK-VYVAN-SGSNNISIINTD-ANTVTATVPVGISPTGVAVVPDG 594

Query: 359 DLIAFTKFSGE----KFAIGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLI------FS 407
             + +   SG     +  + V+    S     V   N  +    +P G+ +       + 
Sbjct: 595 SKV-YVANSGSYPSYEGTVSVIDTATSMVTATVHVGNHPSRVAVTPDGKKVYVANWGHYV 653

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAY 436
              D  T +   ++D++   + ++  P  
Sbjct: 654 SVVDTATNTVTATVDVDNSPDEIVVNPTG 682



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/152 (15%), Positives = 50/152 (32%), Gaps = 16/152 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ +K AY        + V    T       ++G+          S +GK+  ++     
Sbjct: 508 PDGKK-AYVPDRWGVNVSVVDTATNTVIDTVKVGSDP---YGVAISPDGKKVYVANSGSN 563

Query: 281 AMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFE---SDREGKEQLYVMQSN 334
            + I + D  +     +T T+ + IS +     PD S++      S    +  + V+ + 
Sbjct: 564 NISIINTDANT-----VTATVPVGISPTGVAVVPDGSKVYVANSGSYPSYEGTVSVIDTA 618

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            S                  +P G  +    +
Sbjct: 619 TSMVTATVHVGNHPSRV-AVTPDGKKVYVANW 649



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 84/242 (34%), Gaps = 28/242 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +KV Y      + + +   D     A   +G   + +       +G +  ++  
Sbjct: 547 AISPDGKKV-YVANSGSNNISIINTDANTVTATVPVGISPTGV---AVVPDGSKVYVANS 602

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSN 334
                   +V +   AT  +T T+ +    S    +PD  + V+ ++         +   
Sbjct: 603 GSYPSYEGTVSVIDTATSMVTATVHVGNHPSRVAVTPDGKK-VYVANWG---HYVSVVDT 658

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIA-------FTKFSGEKFAIGVMKKDGSQERLLV 387
            ++    + D + S  + V +P G  +        +   + + F   +     +   +  
Sbjct: 659 ATNTVTATVDVDNSPDEIVVNPTGTKVYVAGMKKGYAAGTDDGFVSAI--GTSNNTIIAT 716

Query: 388 EDSNLQAP---TWSPSGRSLIFS-RKKDGDTGSKLYSIDLNGRNETL-INTPAY---ASD 439
            D    +P     +P G+++  +     G++   +     +  + T+ I TP       D
Sbjct: 717 MDIVGGSPIGLAVTPDGKTVYVANSNISGNSTLSVIDTSNDTVSATVNIETPGRIAIIPD 776

Query: 440 PQ 441
           P+
Sbjct: 777 PE 778


>gi|261202748|ref|XP_002628588.1| HNWD1 [Ajellomyces dermatitidis SLH14081]
 gi|239590685|gb|EEQ73266.1| HNWD1 [Ajellomyces dermatitidis SLH14081]
          Length = 1201

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 54/152 (35%), Gaps = 22/152 (14%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +SP++ ++     D    +R++   T  +           ++ +  +S +G R   S  
Sbjct: 944  AWSPDESQLTSGLLD--RTVRIWDPVTEHN-----------LVSSIAWSLDGNRLT-SGS 989

Query: 278  KDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             D  + I+  DL +     LT         S  +S D SQ+   S   G   + +     
Sbjct: 990  SDRILRIW--DLATRQCT-LTLKGHSNSVTSIVWSLDGSQL--TSG-LGDNTVKIWDLGT 1043

Query: 336  SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
             +     ++   S    VWS  G  +A    +
Sbjct: 1044 RECISTLEEHNNSVNSIVWSLDGSRLASGSRN 1075



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/131 (13%), Positives = 40/131 (30%), Gaps = 16/131 (12%)

Query: 182  ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
              + SG     L + D                +    +S +  ++     D+     V +
Sbjct: 983  NRLTSGSSDRILRIWDLATRQCTLTLKGHSNSVTSIVWSLDGSQLTSGLGDN----TVKI 1038

Query: 242  MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY---------SVDLQSN 292
             D         +    + + +  +S +G R   S  ++  + I+          +D+QS+
Sbjct: 1039 WDLGTRECISTLEEHNNSVNSIVWSLDGSRLA-SGSRNAKVRIWDPANEQCISILDVQSS 1097

Query: 293  ATERLTNTLFI 303
               RL      
Sbjct: 1098 G--RLRFGKGN 1106


>gi|189196466|ref|XP_001934571.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187980450|gb|EDU47076.1| conserved hypothetical protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 529

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 39/117 (33%), Gaps = 15/117 (12%)

Query: 309 YSPDSSQIVF----ESDREGK------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           ++ D   +++    ES + GK        L +   +   +                SP  
Sbjct: 239 FTSDGRLLLYHANNESTQRGKRKPEELPLLVIYDVDAGVELHRLMGHTNIISWSAISPDN 298

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGD 413
              A   + G    + +      +     E +N+Q+    +SP  + +I +R + G 
Sbjct: 299 TYAASVSWDGS---LRMYSVSTGELVWATEKNNMQSWAGAFSPDSKFIICARHQGGR 352



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 39/243 (16%), Positives = 67/243 (27%), Gaps = 49/243 (20%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS-------LCVMDRDGANIR 204
           R+  + I D +           + R+L    +  S             L + D D     
Sbjct: 220 RRHNNVIKDALIGGYESVPFTSDGRLLLYHANNESTQRGKRKPEELPLLVIYDVDAGVEL 279

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +       I+     SP+    A  ++D    LR+Y + T          N +S   A  
Sbjct: 280 HRLMGHTNIISWSAISPDNTYAASVSWD--GSLRMYSVSTGELVWATEKNNMQSWAGA-- 335

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS + K  + +  +   +                          + P  SQI    +R  
Sbjct: 336 FSPDSKFIICARHQGGRVVQ------------------------WHPTRSQIALCVER-- 369

Query: 325 KEQLYVMQSNGSDQKRI----------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              +YV         +I          +    A      W  +G+L+      G K    
Sbjct: 370 --NVYVWDPFDGPDGKILQHLKLDDNKTWRYLAGIQAVGWMKEGNLLYVESVQGTKLVYD 427

Query: 375 VMK 377
           V  
Sbjct: 428 VHS 430


>gi|166366304|ref|YP_001658577.1| WD repeat-containing protein [Microcystis aeruginosa NIES-843]
 gi|166088677|dbj|BAG03385.1| WD-repeat protein [Microcystis aeruginosa NIES-843]
          Length = 337

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/165 (14%), Positives = 53/165 (32%), Gaps = 12/165 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +  +    ++    SP+   +   ++D      V   D +  + P R       + A +
Sbjct: 52  TILKADQDPIYALAISPDNSLLLSGSFDG----TVREWDLKT-QKPLRTWQLGDTVNAIQ 106

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDRE 323
           FS +GK   ++      +  +  + ++   E       F+   A+ SPD   +   S   
Sbjct: 107 FSPDGKS-FVTADAGGKVQRW--NTRTGKLEMTYPGHAFLVTDAAISPDGKILATGS--- 160

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
               + +         +  +          +SP G  I    + G
Sbjct: 161 WDRTVKLWDFQTGTLLKTLRGHNHPIQAIAFSPDGKGIVSADYDG 205



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 79/230 (34%), Gaps = 19/230 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ +   + T D     +V   +TR  +          ++     S +GK  L +   
Sbjct: 107 FSPDGKS--FVTADAGG--KVQRWNTRTGKLEMTYPGHAFLVTDAAISPDGK-ILATGSW 161

Query: 279 DEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D  + ++  D Q+    + L        + ++SPD   IV  +D +G  +L+ +      
Sbjct: 162 DRTVKLW--DFQTGTLLKTLRGHNHPIQAIAFSPDGKGIV-SADYDGFVKLWKVS--TGR 216

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             R         +  ++S  G+        G      V    G+   L   D+       
Sbjct: 217 FIRAYAGNLFPVYRVLFSKDGNTAGTASQDGSIRGWQVKSGIGTTTILAHNDAVTDMA-- 274

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSID----LNGRNETLINTPAYASDPQWV 443
              G  ++      GD   K + ++    LN     +I     + D +W+
Sbjct: 275 LLDGGKVL--ASTSGDGTVKFWDVNTRRHLNTLKGNVILRMVASRDGRWL 322



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 72/211 (34%), Gaps = 21/211 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             P    ++ +   SP+ + +A  ++D      V L D +     K +      I A  F
Sbjct: 136 TYPGHAFLVTDAAISPDGKILATGSWDR----TVKLWDFQTGTLLKTLRGHNHPIQAIAF 191

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQIVFESD 321
           S +GK  + S   D  + ++ V        R       N+       +S D +     + 
Sbjct: 192 SPDGKGIV-SADYDGFVKLWKVSTG-----RFIRAYAGNLFPVYRVLFSKDGNT-AGTAS 244

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           ++G  + + ++S       ++ +   +    +    G  +  +              +  
Sbjct: 245 QDGSIRGWQVKSGIGTTTILAHNDAVTDMALL---DGGKVLASTSGDGTVKFW--DVNTR 299

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           +    ++ + +     S  GR L+ +  +DG
Sbjct: 300 RHLNTLKGNVILRMVASRDGRWLV-TGDRDG 329



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 61/183 (33%), Gaps = 11/183 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ + D     +       +  +    FSP+ + +  A YD      V L    
Sbjct: 158 TGSWDRTVKLWDFQTGTLLKTLRGHNHPIQAIAFSPDGKGIVSADYDG----FVKLWKVS 213

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R  +        +    FS +G  A  +  +D ++  + V      T  L +   +  
Sbjct: 214 TGRFIRAYAGNLFPVYRVLFSKDGNTAG-TASQDGSIRGWQVKSGIGTTTILAHNDAVTD 272

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A    D  +++  +  +G  + + + +    ++ ++  K       V S  G  +    
Sbjct: 273 MALL--DGGKVLASTSGDGTVKFWDVNT----RRHLNTLKGNVILRMVASRDGRWLVTGD 326

Query: 366 FSG 368
             G
Sbjct: 327 RDG 329


>gi|302800760|ref|XP_002982137.1| hypothetical protein SELMODRAFT_116037 [Selaginella moellendorffii]
 gi|300150153|gb|EFJ16805.1| hypothetical protein SELMODRAFT_116037 [Selaginella moellendorffii]
          Length = 416

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 51/158 (32%), Gaps = 11/158 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           ++     + ++    SP + +V           ++++     D AP  +   +  I +  
Sbjct: 79  HIFTGHAESVYAVACSPVESRVVAT---GGGDDKIFIWKIGDDAAPLELKEHKDSISSLA 135

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDRE 323
           FS +GK             +   D   +   RL      + +   + P    ++  S   
Sbjct: 136 FSFDGKLLA---SGGLDGVVCVWDGVGSLKHRL-EGPGEDIVWLCWHPRGHILLAGSQ-- 189

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +++  ++      +      S     ++P G L+
Sbjct: 190 -DFSVWMWNADSGACLSVFTGHSGSVICGCFTPDGKLV 226



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 63/195 (32%), Gaps = 18/195 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    S+ + + D      +       +    F+P+ + V   + D      + + + R
Sbjct: 186 AGSQDFSVWMWNADSGACLSVFTGHSGSVICGCFTPDGKLVCTGSSD----CSLRVWNPR 241

Query: 246 IDRAPKRIGNFR---SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT- 300
                + I         +       +     ++   D +  +  V++QS      L+   
Sbjct: 242 SGECIRNIQGHPYHRGGVTCVAVGRD-SSIALTGSADGS--VCLVNIQSGRVLGTLSGHT 298

Query: 301 ---LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                I +S   SP    +     R+ K  L V         R++ D +   +  +WSP 
Sbjct: 299 QAIEAIALSPRCSPAFLSLAATGGRDKK--LIVWDLQTLSV-RLTCDHQDDVYRIIWSPS 355

Query: 358 GDLIAFTKFSGEKFA 372
            ++I      G   A
Sbjct: 356 SEMIYTACLDGSVHA 370


>gi|289615353|emb|CBI57939.1| unnamed protein product [Sordaria macrospora]
          Length = 1005

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 82/250 (32%), Gaps = 50/250 (20%)

Query: 220 SPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRA 272
           SP+ +++A A          +  ++    R    P+++    +    I + RFS NG+  
Sbjct: 26  SPDGKRLATAGGDGHVRVWSVEAIFNSHDRNYTKPRQLCHMSHHLGTIHSVRFSPNGRYL 85

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---------------------SYSP 311
                  +   I    L SN     T+T   N                        ++SP
Sbjct: 86  A---SGADDKIICIYHLDSNPPSH-TSTFGTNEPPPVENWKTYKRLVGHDNDVQDLAWSP 141

Query: 312 DSS---------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           D+S         +IV  S     E+L  +  + S  K I+ D    +F      +   I 
Sbjct: 142 DNSLLVSVGLDSKIVVWSGHT-FEKLKTLAVHQSHVKGITFDPANKFFATASDDRTIKIF 200

Query: 363 -FTKFSGEKFAIGVMK---KDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +T  +       ++     + S           +  +  +WSP G  +  +   +G   
Sbjct: 201 RYTAPAPNATQHDMVNNFILETSISVPFKHSPLTTYFRRCSWSPDGNHIAAANAVNGP-V 259

Query: 416 SKLYSIDLNG 425
           S +  I+  G
Sbjct: 260 SSIAIIERTG 269



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 46/321 (14%), Positives = 101/321 (31%), Gaps = 73/321 (22%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD----------GA 201
           R++ H      +   T     F+    +++    SG     +C+   D          G 
Sbjct: 61  RQLCHM----SHHLGTIHSVRFSPNGRYLA----SGADDKIICIYHLDSNPPSHTSTFGT 112

Query: 202 NIRYLTP---------SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           N                 D  + +  +SP+   +     D +    + +         K 
Sbjct: 113 NEPPPVENWKTYKRLVGHDNDVQDLAWSPDNSLLVSVGLDSK----IVVWSGHTFEKLKT 168

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFINIS---- 306
           +   +S +    F    K    +   D  + I+     +    +  + N   +  S    
Sbjct: 169 LAVHQSHVKGITFDPANKFFA-TASDDRTIKIFRYTAPAPNATQHDMVNNFILETSISVP 227

Query: 307 ------------ASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPV 353
                        S+SPD + I   +   G    + +++  G D +      EA     +
Sbjct: 228 FKHSPLTTYFRRCSWSPDGNHIAAANAVNGPVSSIAIIERTGWDSEINLIGHEAPTEVCM 287

Query: 354 WSP--------------QG----DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +SP               G     L+     +G+   + +   + S+  L+++D   ++ 
Sbjct: 288 FSPRLFYTQQPDENSNANGAAAPSLVTVIASAGQDKTLTIWNTNTSRPVLIIQDIASKSV 347

Query: 396 T---WSPSGRSLIFSRKKDGD 413
           +   W+P G+++ F+   DG 
Sbjct: 348 SDLAWTPDGQTV-FAASLDGG 367



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 60/195 (30%), Gaps = 37/195 (18%)

Query: 265 FSSNGKRALISVQKDEAMDIYSV-------DLQSNATERL---TNTLFINISASYSPDSS 314
            S +GKR   +   D  + ++SV       D       +L   ++ L    S  +SP+  
Sbjct: 25  VSPDGKRLA-TAGGDGHVRVWSVEAIFNSHDRNYTKPRQLCHMSHHLGTIHSVRFSPNGR 83

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQ-------------------DKEASYFDPVWS 355
            +   +D    + + +   + +     S                      +    D  WS
Sbjct: 84  YLASGAD---DKIICIYHLDSNPPSHTSTFGTNEPPPVENWKTYKRLVGHDNDVQDLAWS 140

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P   L+        K  +         + L V  S+++  T+ P+ +   F      D  
Sbjct: 141 PDNSLLVSVGLD-SKIVVWSGHTFEKLKTLAVHQSHVKGITFDPANK---FFATASDDRT 196

Query: 416 SKLYSIDLNGRNETL 430
            K++       N T 
Sbjct: 197 IKIFRYTAPAPNATQ 211



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 36/124 (29%), Gaps = 32/124 (25%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGV------MKKDGSQERLL----VEDSNLQAPTWSP 399
           +    SP G  +A     G      V        ++ ++ R L         + +  +SP
Sbjct: 21  YSCHVSPDGKRLATAGGDGHVRVWSVEAIFNSHDRNYTKPRQLCHMSHHLGTIHSVRFSP 80

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLN--------GRNE-----------TLINTPAYASDP 440
           +GR L        D    +Y +D N        G NE            L+       D 
Sbjct: 81  NGRYLA---SGADDKIICIYHLDSNPPSHTSTFGTNEPPPVENWKTYKRLVGHDNDVQDL 137

Query: 441 QWVG 444
            W  
Sbjct: 138 AWSP 141


>gi|86132613|ref|ZP_01051206.1| OmpA family protein [Dokdonia donghaensis MED134]
 gi|85816855|gb|EAQ38040.1| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 650

 Score = 46.9 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 61/164 (37%), Gaps = 35/164 (21%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           ++   S  + +L NT++   S ++S D   + F  +   K   Y    +G ++ +I +  
Sbjct: 209 TMSPPSRFSRKL-NTIYHESSPTFSKDGKTVYFTRNNFTKGD-YKASKDGINKLKIYKST 266

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             S     W+ + + + F                        +D +   P  S  GR L 
Sbjct: 267 YLS-SSKSWT-KAEEVPFNS----------------------DDFSNAHPALSRDGRLLY 302

Query: 406 FSRKKDGDTG-SKLYSIDLN-----GRNE---TLINTPAYASDP 440
           FS  + G  G S ++ +D+N     G  E     INT    + P
Sbjct: 303 FSSDRAGGVGRSDIWRVDINEDGTYGEPENMGKPINTEGREAFP 346



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 51/174 (29%), Gaps = 39/174 (22%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRALIS--------- 275
           +      D+ R  + +      P R     N      +P FS +GK    +         
Sbjct: 191 WTNQPFLDLYRSTIKEDGTMSPPSRFSRKLNTIYHESSPTFSKDGKTVYFTRNNFTKGDY 250

Query: 276 -VQKDEAMDIYSVDLQSNATERLTNTLFI--------------NISASYSPDSSQIVFES 320
              KD    +         +  L+++                 N   + S D   + F S
Sbjct: 251 KASKDGINKLKIY-----KSTYLSSSKSWTKAEEVPFNSDDFSNAHPALSRDGRLLYFSS 305

Query: 321 DRE---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           DR    G+  ++ +  N       +  +  +   P+ +   +   F   +G  +
Sbjct: 306 DRAGGVGRSDIWRVDINEDG----TYGEPENMGKPINTEGREAFPFMSDTGNLY 355



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/168 (14%), Positives = 48/168 (28%), Gaps = 31/168 (18%)

Query: 217 PRFSPNQQKVAYATYDDEDI---------------LRVYLMDTRIDRAPKRIG--NFRSM 259
           P FS + + V +   +                      YL  ++     + +   +    
Sbjct: 229 PTFSKDGKTVYFTRNNFTKGDYKASKDGINKLKIYKSTYLSSSKSWTKAEEVPFNSDDFS 288

Query: 260 ILAPRFSSNGKRALISVQKDEA---MDIYSVDLQ----SNATERL---TNTLFINISASY 309
              P  S +G+    S  +       DI+ VD+         E +    NT         
Sbjct: 289 NAHPALSRDGRLLYFSSDRAGGVGRSDIWRVDINEDGTYGEPENMGKPINTEGREAFPFM 348

Query: 310 SPDSSQIVFESDRE---GKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           S D+  + + SD     G   +YV   +  +   +      +     +
Sbjct: 349 S-DTGNLYYASDGYPGLGGLDVYVTNPSSEEIAVVGVGAPINSSSDDF 395


>gi|154340729|ref|XP_001566321.1| activated protein kinase c receptor (LACK) [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134063640|emb|CAM39825.1| activated protein kinase c receptor (LACK) [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 312

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/299 (14%), Positives = 105/299 (35%), Gaps = 33/299 (11%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV------SESVVSGIIKNS 192
           ++      +  SW+      S D    +   + + ++  +        ++  ++     S
Sbjct: 29  VVSTSRDGTAISWKSNPDRHSVDSDYGLPNHRLEGHTGFVSCVSLAHATDYALTASWDRS 88

Query: 193 LCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           + + D R+G + R        +L    FSP+ + +   +   ++++RV+ +         
Sbjct: 89  IRMWDLRNGQSQRKFLKHTKDVLAV-AFSPDDRLI--VSAGRDNVIRVWNVAGECMHEFL 145

Query: 252 RIGNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           R G     + +  FS + +   ++S   D  + +++V+ +      L        + + S
Sbjct: 146 RDG-HEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVN-EGKCERTLKGHSNYVSTVTVS 203

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-- 368
           PD S         GK+   ++    + ++    + E++     +SP    +         
Sbjct: 204 PDGSLCA----SGGKDGAALLWDLSTGEQLFRINVESAINQIAFSPNRFWMCVAAEKSLS 259

Query: 369 -----EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                 K  I  +  DG       + S   +  WS  G +L        D   +++SI 
Sbjct: 260 VYDLESKAVIAELTPDG------TKPSECISIAWSADGNTLY---SGHKDNLIRVWSIS 309


>gi|299752231|ref|XP_001830789.2| hypothetical protein CC1G_03326 [Coprinopsis cinerea okayama7#130]
 gi|298409738|gb|EAU91158.2| hypothetical protein CC1G_03326 [Coprinopsis cinerea okayama7#130]
          Length = 1057

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/244 (13%), Positives = 71/244 (29%), Gaps = 33/244 (13%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S + + ++     D         S           P  +KVA A+    D L+V ++D  
Sbjct: 76  SDVRRYAIGSTSSD-----ATVTSTSVPARSIAIDPKGRKVAVAS----DELKVRVVDLE 126

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-------- 297
              + + +  + +   A  +  +G   L +   D  + I+ +       E+         
Sbjct: 127 DTVSVQDLTGYTAHARAVSWHPSGN-ILTTCTADGKILIWDLSEDEPRLEKTIEGILPVV 185

Query: 298 ----TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
               +     + SA + P  S     S       +     +         D   +     
Sbjct: 186 KDDESTEYGYDCSAVWHPSGSHFYVASKSHQIVAISRSDWSKIPGSFSHTDALGAITALA 245

Query: 354 WSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
            SP G+ +A    S       K    +    G+    + +        + P    + ++ 
Sbjct: 246 ISPNGEYLASASQSTVRVWSTKSRQHITNATGTPGATITQL------AFCPKRNLIAWTD 299

Query: 409 KKDG 412
            + G
Sbjct: 300 DEGG 303


>gi|302916305|ref|XP_003051963.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256732902|gb|EEU46250.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 685

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 72/228 (31%), Gaps = 58/228 (25%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAM---DIYSVDLQSNATERLTNTLFINISAS 308
           R+    +  LAP  S N   A+   ++        +++V L +N   + T      +   
Sbjct: 170 RVEGAANFALAPG-SQNHAVAVFVPERKGQPAAVKVFNVPLFTNPISQKTFFKGDKVQLK 228

Query: 309 YSPDSSQIVFES----DREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ-- 357
           ++   S ++  +    DR GK       LY++ + G+   R+S DK+    D  WSP   
Sbjct: 229 WNKHGSSLLVLAQTDVDRSGKSYYGETTLYLLSTTGAFDARVSLDKDGPIHDVSWSPNSK 288

Query: 358 ---------------------------------------GDLIAFTKFSGEKFAIGVMKK 378
                                                  G  +    F      I V   
Sbjct: 289 EFGVVYGYMPAKATIFNHRAVATHSFPISPRNTITFSPTGRFVLVAGFGNLAGQIDVYDL 348

Query: 379 DGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSID 422
           +    ++   E  N     WSP  R ++ +        D G KL+ + 
Sbjct: 349 EKDFRKITTIESGNPSVCEWSPDSRYIMTATTSPRLRVDNGVKLWHVS 396


>gi|294654568|ref|XP_456625.2| DEHA2A06908p [Debaryomyces hansenii CBS767]
 gi|218512068|sp|Q6BYU4|HIR1_DEBHA RecName: Full=Protein HIR1
 gi|199428981|emb|CAG84581.2| DEHA2A06908p [Debaryomyces hansenii]
          Length = 985

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 110/363 (30%), Gaps = 87/363 (23%)

Query: 117 IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI----AHTISDDIYQS----ITG 168
            +     L    ++WD K    +  K + + PA+          T++ DI +     ++ 
Sbjct: 30  SRLASGGLDGNVKIWDTKS--ILHFKNYEAEPATLNNKNGINLDTLNSDIIRRPLCSMSR 87

Query: 169 EKGDFNSRILFVSES-VVSGIIKNSLCVMDRD------------------GANIRYLTPS 209
             G   S         + SG     + + ++D                     +R    +
Sbjct: 88  HNGVVTSVKFSPDGRFLASGSDDKIVLIWEKDEEQANRPKQFGEAEADLEHWTVRKRLVA 147

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            D  + +  +SP+   +     D      + + +       KR    +SM+    F    
Sbjct: 148 HDNDIQDICWSPDGSLLVTVGLDR----SIIIWNGLTFERIKRYDIHQSMVKGIVFDPAN 203

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS----------------------A 307
           K    +   D ++ I+          +L+ +   N                         
Sbjct: 204 KFFA-TASDDRSVRIFRY------YRKLSESSINNYEFQMEHIVIDPFKKSPLTSYFRRM 256

Query: 308 SYSPDSSQIVFESDREGK-EQLYVMQSN--GSDQKRISQDKEASYFDPVWSPQ------- 357
           S+SPD   I   +   G    + ++     G+D   I    EA      +SP+       
Sbjct: 257 SWSPDGQHIAVPNATNGPVTSVAIINRTNWGTDISLI--GHEAPCEVCCFSPRLFEYDDS 314

Query: 358 ----------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSL 404
                     G+       +G+   + V     S+  ++  D    ++    W+P G++L
Sbjct: 315 NDSQKNKNGMGNFTTILATAGQDQNLVVWTTRQSKPLVVAHDIVSGSITDMCWAPDGQTL 374

Query: 405 IFS 407
            FS
Sbjct: 375 YFS 377



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 82/221 (37%), Gaps = 36/221 (16%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGK--------RALISVQKD 279
           AT ++++ + +  +++ I R P   +     ++ + +FS +G+        + ++  +KD
Sbjct: 60  ATLNNKNGINLDTLNSDIIRRPLCSMSRHNGVVTSVKFSPDGRFLASGSDDKIVLIWEKD 119

Query: 280 EAMDI-------YSVDLQS-NATERLTNTLFINISASYSPDSSQIVFES-DRE------- 323
           E              DL+     +RL           +SPD S +V    DR        
Sbjct: 120 EEQANRPKQFGEAEADLEHWTVRKRLVAHDNDIQDICWSPDGSLLVTVGLDRSIIIWNGL 179

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG--------DLIAFTKFSGEKFAIGV 375
             E++     + S  K I  D  A+ F    S             ++ +  +  +F +  
Sbjct: 180 TFERIKRYDIHQSMVKGIVFD-PANKFFATASDDRSVRIFRYYRKLSESSINNYEFQMEH 238

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           +  D  ++  L   S  +  +WSP G+ +      +G   S
Sbjct: 239 IVIDPFKKSPLT--SYFRRMSWSPDGQHIAVPNATNGPVTS 277


>gi|162455402|ref|YP_001617769.1| WD repeat-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161165984|emb|CAN97289.1| WD-repeat protein [Sorangium cellulosum 'So ce 56']
          Length = 1243

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/290 (11%), Positives = 85/290 (29%), Gaps = 19/290 (6%)

Query: 133  VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
              D ++I+   +  + A W      + + +      +           + +V+SG    +
Sbjct: 802  TADGRRILSASYDRTLALWEIG---VPESLMPQDEHDAPVAACAAALDAPTVISGSEDRT 858

Query: 193  LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
            L + D      R        ++         ++      D      V L +    R  + 
Sbjct: 859  LKIWDAATGACRATLAGHADLVTACASCAKGRRALSGARDG----SVRLWNLTTRRLVEA 914

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYS 310
            +    +++    F+ +G+    +   D  + +   D       RL            S S
Sbjct: 915  LDGHAALVSGCAFTPDGRMI--TASHDGTLRVRGAD----DKRRLMVLRHGDPVEGFSIS 968

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             +   ++  S R G  +++ ++      +R      +       +P G   A       +
Sbjct: 969  QNGDYVLSFS-RFGTAKVWALK--SGRCERTFAPFTSPILAGALTPDGRR-AVLALESGE 1024

Query: 371  FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              +  +  +     L      +      P G  ++ + +        L++
Sbjct: 1025 IEVWDIHGNWRLPVLKGHRGRVFGCAVLPDGARVVSASEDKTLKVWNLHT 1074


>gi|119613093|gb|EAW92687.1| WD repeat domain 1, isoform CRA_b [Homo sapiens]
          Length = 545

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 85/268 (31%), Gaps = 40/268 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTE----HAHQVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 65  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---------GANIRYL 206
                          G+       ++   +       L     D             ++ 
Sbjct: 125 EKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFT 184

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
                + +   RFSP+  + A A+ D     ++Y+ D +       +G  +     I A 
Sbjct: 185 VGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAI 240

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +S +    L S   D+   I+ V + S
Sbjct: 241 SWSPDSTHLL-SASGDKTSKIWDVSVNS 267


>gi|113478309|ref|YP_724370.1| WD-40 repeat-containing protein [Trichodesmium erythraeum IMS101]
 gi|110169357|gb|ABG53897.1| WD-40 repeat [Trichodesmium erythraeum IMS101]
          Length = 891

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/208 (18%), Positives = 80/208 (38%), Gaps = 25/208 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            FS N + +A A  +    ++++ L    I+ +  ++ +   +I    FS N        
Sbjct: 671 SFSANGKYLATAGINI--PVQIWNLSSLPINISSDQVLDDHGLIRNIHFSPNDNFLA--- 725

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D    I   +L  N  + L +   I  S ++S +  QI+  +   G  +++      +
Sbjct: 726 TLDGKSTIRLWNLSENKFKIL-DVEAI--SMNFSINKPQILLTATSNGIVEMWQ-----T 777

Query: 337 DQKRISQDKEASYFDPV---WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
              R+  + ++ + D     +SP G LIA     G    + +    G Q        N+ 
Sbjct: 778 YTGRLVNNFQSLHLDTKLVNFSPDGRLIATV---GIDSIVRLWNLSGRQINQFEFSENVI 834

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +S  G+ +  +     D+  +++ I
Sbjct: 835 DIAFSSDGKKIAVA-----DSNGQIWLI 857



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 63/162 (38%), Gaps = 16/162 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSPN   +A  T D +  +R++ +         +I +  ++ +   FS N  + L++   
Sbjct: 717 FSPNDNFLA--TLDGKSTIRLWNL----SENKFKILDVEAISM--NFSINKPQILLTATS 768

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +  ++++     +        +L ++    ++SPD   I           + +   +G  
Sbjct: 769 NGIVEMWQ--TYTGRLVNNFQSLHLDTKLVNFSPDGRLIA---TVGIDSIVRLWNLSGRQ 823

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             +   +   +  D  +S  G  IA    +G+ + I +   +
Sbjct: 824 INQ--FEFSENVIDIAFSSDGKKIAVADSNGQIWLIYLENLE 863


>gi|322700254|gb|EFY92010.1| putative transcription initiation factor TFIID 100Kda [Metarhizium
           acridum CQMa 102]
          Length = 754

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 4/144 (2%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG     L V  +D A+ + L    D  +    + PN   V  A+ + +  +R  +    
Sbjct: 512 SGGYDKVLRVWMQDHASPQRLLVGHDTAISAIAWHPNGMYVFSASDETDKSIR--MWSVV 569

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +        I A   + NGK  L S      +  + +   +       +      
Sbjct: 570 TGACVRVFAGHTDHITALECAPNGK-ILASADLAGNIFFWDLAKGTRIKRSRGHGRGGIW 628

Query: 306 SASYSPDSSQIVFESDREGKEQLY 329
           S S+S +S+ +     ++G  +L+
Sbjct: 629 SLSFSVESNVLA-SGGQDGTVRLW 651



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/296 (11%), Positives = 85/296 (28%), Gaps = 36/296 (12%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            I G  G   + +     +  +     S      DG   + +     +      +S + +
Sbjct: 353 KIDGRTGGIGTSVSACMFTFHNTFGTVSCMDFSDDG---QLVAAGTSESYIR-VWSLDGR 408

Query: 225 KVAYATYDDED--------------ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            +      ++D              +  V   ++    A +  G+       P    +G+
Sbjct: 409 GLPTMNAHEKDAKFNSRKLIGHAAPVYDVSFSESASGPAQRLFGDEGRHN--PAM--DGR 464

Query: 271 -RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            + L+S   D  + ++S++          +         + P      F S     + L 
Sbjct: 465 PKLLLSCSADGHVRLWSLE-SWACLCLYKSHDGPIYRTLWGPHGHY--FISG-GYDKVLR 520

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   + +  +R+    + +     W P G  + F+       +I +          +   
Sbjct: 521 VWMQDHASPQRLLVGHDTAISAIAWHPNGMYV-FSASDETDKSIRMWSVVTGACVRVFAG 579

Query: 390 SNLQAPTW--SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
                     +P+G+ L        D    ++  DL  +   +  +  +     W 
Sbjct: 580 HTDHITALECAPNGKILA-----SADLAGNIFFWDLA-KGTRIKRSRGHGRGGIWS 629


>gi|255070605|ref|XP_002507384.1| predicted protein [Micromonas sp. RCC299]
 gi|226522659|gb|ACO68642.1| predicted protein [Micromonas sp. RCC299]
          Length = 937

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/226 (16%), Positives = 75/226 (33%), Gaps = 39/226 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTR---IDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            FS +  ++   +      + VY   +          RI   +  I +   S +GK   I
Sbjct: 66  SFSEDGSRLLVGSNFYPYHVDVYEWQSGSSAWTPLGSRISPPQGFIQSACLSGDGKVVAI 125

Query: 275 S-VQKDEAMDIYSVDL---QSNATERL------TNTLFINISASYSPDSS---------- 314
           S    D  +  ++V +    S + +R+      +++       S S D            
Sbjct: 126 SDYDNDGIVGWWTVTVYHYASGSWQRVGSDILGSSSEGYVAKVSLSSDGKVLAIGNNDQT 185

Query: 315 -----QIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFS 367
                   F + R G+ ++Y   ++      +  +Q  E        S   D  +F  +S
Sbjct: 186 LSSYDSTAFNATRTGRVRIYQWPASDLTASGVAWTQMGETIEAWSTVSGTTDDFSFGPYS 245

Query: 368 GEKF-AIGVMKKDGSQERLLVEDSN--------LQAPTWSPSGRSL 404
            + +   G +  DG +  +   D           ++ +WS  G S+
Sbjct: 246 RKVYADTGTLSGDGKRIAVFTPDGYSQNGYVYEWKSSSWSVVGDSI 291


>gi|119591444|gb|EAW71038.1| ATG16 autophagy related 16-like 1 (S. cerevisiae), isoform CRA_f
           [Homo sapiens]
 gi|119591445|gb|EAW71039.1| ATG16 autophagy related 16-like 1 (S. cerevisiae), isoform CRA_f
           [Homo sapiens]
          Length = 463

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 187 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 235

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 236 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 277

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 278 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 329

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 330 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 383

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 384 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 441

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 442 SPSGSHVV 449


>gi|114583976|ref|XP_001149789.1| PREDICTED: APG16 autophagy 16-like isoform 6 [Pan troglodytes]
          Length = 463

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 187 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 235

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 236 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 277

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 278 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 329

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 330 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 383

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 384 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 441

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 442 SPSGSHVV 449


>gi|327540286|gb|EGF26872.1| 6-phosphogluconolactonase [Rhodopirellula baltica WH47]
          Length = 402

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/292 (13%), Positives = 88/292 (30%), Gaps = 53/292 (18%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDF------NSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           ++R  A +    + +  + E GD         R   V  S   G    +L  +  DG+  
Sbjct: 111 AYRVQADSTDAKLVEMGSVESGDGGVAHLATDRTGSVLLSAQYGGGSTTLYELAEDGSVK 170

Query: 204 RYLTPSRDQILFEPR---------------F---SPNQQKVAYATYDDEDILRVYLMDTR 245
           R +     + L  P                +   SP+  +  +      D + ++ +D  
Sbjct: 171 RRVQVYEHEALLSPAGSGVVGNRQDAPHAHWVGTSPD-NRFTFTPDLGMDKVVIWKLDPS 229

Query: 246 IDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATE------- 295
                            PR   FS +GKR  +  +   ++ ++  D ++           
Sbjct: 230 GPSLTHHGFGEGIPGGGPRHMKFSPDGKRIYLLNELALSVTVFDYDAKAGTMTAGQTVPA 289

Query: 296 ---------RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                    R  +   I +  S      + V+ ++R G + + V + + + Q  + + + 
Sbjct: 290 LSEEIKAKERFNSASEIRVHPS-----GKFVYSANR-GHDSISVFRIDEAGQMELVEVEA 343

Query: 347 ASYFDPV---WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                P      P G  +           +  +  D  +     +   +  P
Sbjct: 344 IRGGWPRNFNLDPSGRWLIAAGRDSHTATVFEIDADTGELTFTRQTQQVPTP 395


>gi|265762603|ref|ZP_06091171.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263255211|gb|EEZ26557.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 404

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 91/284 (32%), Gaps = 49/284 (17%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPR--FSPNQQKV-AYATYDDEDILRVYLMDTRIDR 248
           SL + D + AN  YL PS D         FS +Q  V A+A   ++  L +      +  
Sbjct: 84  SLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA 143

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINIS 306
            P  +      I+   +S  G   +  + +D A       ++ + +              
Sbjct: 144 DPCYLTTNGKNIVTANYS-GGSITVFPIGQDGALLPASDVIEFKGSGP-----DKERQTM 197

Query: 307 A-----SYSPDSSQIVFESDREGKEQLYVMQSN------------------------GSD 337
                   +PD   ++  +D  G +Q++    N                        GS 
Sbjct: 198 PHLHCVRITPDGKYLL--ADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSG 255

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            + +  + +  +   +    G +IAF    G    I  +  D    +      ++     
Sbjct: 256 PRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQ---GSGDIHL--- 309

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           SP G+ L ++  +    G  ++ +D      T +        P+
Sbjct: 310 SPDGKYL-YASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPR 352


>gi|253563550|ref|ZP_04841007.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251947326|gb|EES87608.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 404

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 91/284 (32%), Gaps = 49/284 (17%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPR--FSPNQQKV-AYATYDDEDILRVYLMDTRIDR 248
           SL + D + AN  YL PS D         FS +Q  V A+A   ++  L +      +  
Sbjct: 84  SLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA 143

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINIS 306
            P  +      I+   +S  G   +  + +D A       ++ + +              
Sbjct: 144 DPCYLTTNGKNIVTANYS-GGSITVFPIGQDGALLPASDVIEFKGSGP-----DKERQTM 197

Query: 307 A-----SYSPDSSQIVFESDREGKEQLYVMQSN------------------------GSD 337
                   +PD   ++  +D  G +Q++    N                        GS 
Sbjct: 198 PHLHCVRITPDGKYLL--ADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSG 255

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            + +  + +  +   +    G +IAF    G    I  +  D    +      ++     
Sbjct: 256 PRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQ---GSGDIHL--- 309

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           SP G+ L ++  +    G  ++ +D      T +        P+
Sbjct: 310 SPDGKYL-YASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPR 352


>gi|254470635|ref|ZP_05084038.1| nitrite reductase protein N [Pseudovibrio sp. JE062]
 gi|211959777|gb|EEA94974.1| nitrite reductase protein N [Pseudovibrio sp. JE062]
          Length = 504

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/202 (15%), Positives = 68/202 (33%), Gaps = 12/202 (5%)

Query: 200 GANIRYLTPSRDQILFEPRFS---PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           G  ++    S  +    P F     +QQ    + Y    +    +       A     + 
Sbjct: 56  GTALQDTIRSGREATEMPSFRDVLNDQQIDELSAYLKTPLDPAPVWGMEQISASLLKNDD 115

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQ 315
              +  P +S++     + V+  +   +  +D  S     R            +SPD   
Sbjct: 116 YEPVKKPLWSADPLNVTLVVETSDH-SVSVLDGDSFEVLTRFKTPFGTRGQPKFSPDGRY 174

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            V+   R+G    ++ + +    + +S+ +   +  + + S  G  IA   +    FAI 
Sbjct: 175 -VYIMSRDG----WIQKFDLYALQEVSRVRAGLNSRNIMLSHDGKWIAVANYLPNTFAIL 229

Query: 375 VMKKDGSQERLLVEDSNLQAPT 396
               D S +++        +P+
Sbjct: 230 SAD-DLSPQKVEQVKGKDGSPS 250


>gi|194751421|ref|XP_001958025.1| GF23722 [Drosophila ananassae]
 gi|190625307|gb|EDV40831.1| GF23722 [Drosophila ananassae]
          Length = 630

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 58/144 (40%), Gaps = 11/144 (7%)

Query: 199 DGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GN 255
           DG  ++ +         ++  +FSP+  K+A  + D   I+          +  + + G 
Sbjct: 300 DGFPMQTIQILTDHCDEVWFCKFSPDGLKLATGSKDSTVIIWDVDPYKLTLKHRRVLDGQ 359

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPD 312
            +  +    +S + K  L+   +D + ++Y  ++       +  +  +  S    ++S D
Sbjct: 360 AQLSVSFVSWSPDSKLILVGGTED-SHELYIWNVDDGKLV-VKFSQSLEDSLACGAFSRD 417

Query: 313 SSQIVFESDREGKEQLYVMQSNGS 336
            S+ V       K QLY+   NG+
Sbjct: 418 GSRFVCG---GQKGQLYLCDLNGT 438



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 11/146 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLF-INISA-SYSPDSSQIVFES 320
           FS +G +   +  KD  + I+ VD    +    R+ +    +++S  S+SPDS +++   
Sbjct: 322 FSPDGLKLA-TGSKDSTVIIWDVDPYKLTLKHRRVLDGQAQLSVSFVSWSPDS-KLILVG 379

Query: 321 DREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             E   +LY+   +      + SQ  E S     +S  G         G+K  + +   +
Sbjct: 380 GTEDSHELYIWNVDDGKLVVKFSQSLEDSLACGAFSRDGSRFV---CGGQKGQLYLCDLN 436

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
           G+      E   + +  +    ++++
Sbjct: 437 GTIVDSW-EGVRVNSIAFRADNKTIL 461


>gi|164426709|ref|XP_957650.2| hypothetical protein NCU04035 [Neurospora crassa OR74A]
 gi|189031303|sp|Q7RZI0|HIR1_NEUCR RecName: Full=Protein hir-1
 gi|157071443|gb|EAA28414.2| hypothetical protein NCU04035 [Neurospora crassa OR74A]
          Length = 1035

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 82/250 (32%), Gaps = 50/250 (20%)

Query: 220 SPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRA 272
           SP+ +++A A          +  ++    R    P+++    +    I + RFS NG+  
Sbjct: 26  SPDGKRLATAGGDGHVRVWSVEAIFNSHDRNYTKPRQLCHMSHHLGTIHSVRFSPNGRYL 85

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---------------------SYSP 311
                  +   I    L SN     T+T   N                        ++SP
Sbjct: 86  A---SGADDKIICIYHLDSNPPSH-TSTFGTNEPPPVENWKTYKRLVGHDNDVQDLAWSP 141

Query: 312 DSS---------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           D+S         +IV  S     E+L  +  + S  K I+ D    +F      +   I 
Sbjct: 142 DNSLLVSVGLDSKIVVWSGHT-FEKLKTLAVHQSHVKGITFDPANKFFATASDDRTIKIF 200

Query: 363 -FTKFSGEKFAIGVMK---KDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +T  +       ++     + S           +  +  +WSP G  +  +   +G   
Sbjct: 201 RYTAPAPNATQHDMVNNFILETSISVPFKHSPLTTYFRRCSWSPDGNHIAAANAVNGP-V 259

Query: 416 SKLYSIDLNG 425
           S +  I+  G
Sbjct: 260 SSIAIIERTG 269



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 47/321 (14%), Positives = 101/321 (31%), Gaps = 73/321 (22%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD----------GA 201
           R++ H      +   T     F+    +++    SG     +C+   D          G 
Sbjct: 61  RQLCHM----SHHLGTIHSVRFSPNGRYLA----SGADDKIICIYHLDSNPPSHTSTFGT 112

Query: 202 NIRYLTP---------SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           N                 D  + +  +SP+   +     D +    + +         K 
Sbjct: 113 NEPPPVENWKTYKRLVGHDNDVQDLAWSPDNSLLVSVGLDSK----IVVWSGHTFEKLKT 168

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFINIS---- 306
           +   +S +    F    K    +   D  + I+     +    +  + N   +  S    
Sbjct: 169 LAVHQSHVKGITFDPANKFFA-TASDDRTIKIFRYTAPAPNATQHDMVNNFILETSISVP 227

Query: 307 ------------ASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPV 353
                        S+SPD + I   +   G    + +++  G D +      EA     +
Sbjct: 228 FKHSPLTTYFRRCSWSPDGNHIAAANAVNGPVSSIAIIERTGWDSEINLIGHEAPTEVCM 287

Query: 354 WSP--------------QG----DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +SP               G     L+     +G+   + +   + S+  L+V+D   ++ 
Sbjct: 288 FSPRLFYTQKPDENSNANGAASPGLVTVIASAGQDKTLTIWNTNTSRPVLIVQDIASKSV 347

Query: 396 T---WSPSGRSLIFSRKKDGD 413
           +   W+P G+++ F+   DG 
Sbjct: 348 SDLAWTPDGQTV-FAASLDGG 367



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 60/195 (30%), Gaps = 37/195 (18%)

Query: 265 FSSNGKRALISVQKDEAMDIYSV-------DLQSNATERL---TNTLFINISASYSPDSS 314
            S +GKR   +   D  + ++SV       D       +L   ++ L    S  +SP+  
Sbjct: 25  VSPDGKRLA-TAGGDGHVRVWSVEAIFNSHDRNYTKPRQLCHMSHHLGTIHSVRFSPNGR 83

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQ-------------------DKEASYFDPVWS 355
            +   +D    + + +   + +     S                      +    D  WS
Sbjct: 84  YLASGAD---DKIICIYHLDSNPPSHTSTFGTNEPPPVENWKTYKRLVGHDNDVQDLAWS 140

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P   L+        K  +         + L V  S+++  T+ P+ +   F      D  
Sbjct: 141 PDNSLLVSVGLD-SKIVVWSGHTFEKLKTLAVHQSHVKGITFDPANK---FFATASDDRT 196

Query: 416 SKLYSIDLNGRNETL 430
            K++       N T 
Sbjct: 197 IKIFRYTAPAPNATQ 211



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 36/124 (29%), Gaps = 32/124 (25%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGV------MKKDGSQERLL----VEDSNLQAPTWSP 399
           +    SP G  +A     G      V        ++ ++ R L         + +  +SP
Sbjct: 21  YSCHVSPDGKRLATAGGDGHVRVWSVEAIFNSHDRNYTKPRQLCHMSHHLGTIHSVRFSP 80

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLN--------GRNE-----------TLINTPAYASDP 440
           +GR L        D    +Y +D N        G NE            L+       D 
Sbjct: 81  NGRYLA---SGADDKIICIYHLDSNPPSHTSTFGTNEPPPVENWKTYKRLVGHDNDVQDL 137

Query: 441 QWVG 444
            W  
Sbjct: 138 AWSP 141


>gi|62460466|ref|NP_001014887.1| notchless protein homolog 1 [Bos taurus]
 gi|61554847|gb|AAX46624.1| Notchless gene homolog [Bos taurus]
 gi|296477008|gb|DAA19123.1| notchless protein homolog 1 [Bos taurus]
          Length = 486

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 62/178 (34%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 104 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCQGHRHW 159

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQ--KRISQDKEA----SYFDPVWS 355
            +S S+SPD  ++       G    Q+ +   +   Q  + ++   +     S+     +
Sbjct: 160 VLSISWSPDGKKLA-----SGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHAN 214

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + V     G  ER L   +  +    W   G  L++S  +D
Sbjct: 215 PECRYVASSSKDGS---VRVWDTTAGRCERTLTGHAQSVTCLRWGGDG--LLYSASQD 267



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  I   S     + +
Sbjct: 341 GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASF---DKSI 397

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 398 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLSTDLPGH 456

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 457 ADEVYAVDWSPDGQRVA 473



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 52/177 (29%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 132 SGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLA---SGCKNGQILLWDPST 188

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I A  +     +   +    S  KD ++ ++           LT  
Sbjct: 189 GKQVGRALTGHSKWITALSWEPLHANPECRYVA-SSSKDGSVRVWDT-TAGRCERTLTGH 246

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 247 AQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 299



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 37/100 (37%), Gaps = 6/100 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDD 233
           +++F  +S V         +   DG   +YL         +++  +S + + +   + D 
Sbjct: 378 QVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 437

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                + + D +  +    +      + A  +S +G+R  
Sbjct: 438 ----TLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVA 473



 Score = 37.3 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 13/115 (11%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            A  R T++L  +  A    ++SP    +   S   G   +     +        Q    
Sbjct: 102 RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGS---GDTTVRFWDLSTETPHFTCQGHRH 158

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAP-TWSP 399
                 WSP G  +A    +G    I +      ++  R L   S      +W P
Sbjct: 159 WVLSISWSPDGKKLASGCKNG---QILLWDPSTGKQVGRALTGHSKWITALSWEP 210


>gi|53712418|ref|YP_098410.1| hypothetical protein BF1126 [Bacteroides fragilis YCH46]
 gi|60680580|ref|YP_210724.1| hypothetical protein BF1038 [Bacteroides fragilis NCTC 9343]
 gi|52215283|dbj|BAD47876.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
 gi|60492014|emb|CAH06775.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
 gi|301162123|emb|CBW21667.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 384

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 46/284 (16%), Positives = 91/284 (32%), Gaps = 49/284 (17%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPR--FSPNQQKV-AYATYDDEDILRVYLMDTRIDR 248
           SL + D + AN  YL PS D         FS +Q  V A+A   ++  L +      +  
Sbjct: 64  SLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGA 123

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINIS 306
            P  +      I+   +S  G   +  + +D A       ++ + +              
Sbjct: 124 DPCYLTTNGKNIVTANYS-GGSITVFPIGQDGALLPASDVIEFKGSGP-----DKERQTM 177

Query: 307 A-----SYSPDSSQIVFESDREGKEQLYVMQSN------------------------GSD 337
                   +PD   ++  +D  G +Q++    N                        GS 
Sbjct: 178 PHLHCVRITPDGKYLL--ADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSG 235

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            + +  + +  +   +    G +IAF    G    I  +  D    +      ++     
Sbjct: 236 PRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQ---GSGDIHL--- 289

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           SP G+ L ++  +    G  ++ +D      T +        P+
Sbjct: 290 SPDGKYL-YASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPR 332


>gi|320537049|ref|ZP_08037028.1| WD domain, G-beta repeat protein [Treponema phagedenis F0421]
 gi|320146124|gb|EFW37761.1| WD domain, G-beta repeat protein [Treponema phagedenis F0421]
          Length = 550

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 11/178 (6%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           ++         +    FS + Q +   + D      + L +T      K   ++    L 
Sbjct: 160 VKIFFAGHTNSVQSLAFSKDGQHLFSVSGDV-----IKLWNTNNFAVEKEFDHYGKAKLP 214

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             FS +GK         +A  I   D +    + +     I     +S D   ++  +D+
Sbjct: 215 VVFSPSGKSFA---SCTDANRISIRDFKGVVQKDIIEEKGIETF-DFSSDGRFLI-IADK 269

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           +G  Q Y +  +G     I    ++       S  G  +     +G+ + I V    G
Sbjct: 270 KGALQFYSV-QSGVLTDTIDSFGKSPAKAFRISNDGKKLLAICKNGKIYRISVEHFTG 326



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 50/145 (34%), Gaps = 9/145 (6%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-FESD 321
           P +S++G     + +      ++ VD    + ER+      N    +   SSQ   F S 
Sbjct: 45  PSWSADGSVFAYASKN----SVFLVD--DTSLERIRTLKDHNNELIFLGFSSQTANFVSA 98

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +    +    +      + +           +S +G+LIA     G+ F    +K    
Sbjct: 99  GKDNTIIKRAITQNKPLSKYTVPSYVQLTSLAYSSEGNLIAGGLNDGKIFISNTLKLSSH 158

Query: 382 QERLLVEDSNLQAPT--WSPSGRSL 404
           + ++          +  +S  G+ L
Sbjct: 159 EVKIFFAGHTNSVQSLAFSKDGQHL 183


>gi|256085379|ref|XP_002578899.1| hypothetical protein [Schistosoma mansoni]
 gi|238664287|emb|CAZ35137.1| WD-repeat protein, putative [Schistosoma mansoni]
          Length = 522

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 57/152 (37%), Gaps = 15/152 (9%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK---RIGNFRSM 259
           I+ L   RD  L+  +FSP+   +A           V +      R      R+    + 
Sbjct: 209 IQTLDHQRDSDLWFCQFSPDGSYLA----TGGKDANVDVWRVDSVRHAVSFFRVLTTPAY 264

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIV 317
           I    +S + K+   +   +E   I   D+ S      +  N   +  +AS+  DS ++ 
Sbjct: 265 IGCLCWSPDSKKLA-ACCGEEQSSILVFDVFSGQQLCSQKVNDEDVYSTASFFSDSRKLA 323

Query: 318 FESDREG-KEQLYVMQSNGSDQKRISQDKEAS 348
           F     G K   YVM +NG  Q   + D   +
Sbjct: 324 F----GGLKGSFYVMVTNGLLQNGSTNDAVNN 351



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 8/72 (11%)

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-----SQERLLVEDSNLQ 393
           + +   +++  +   +SP G  +A     G+   + V + D      S  R+L   + + 
Sbjct: 210 QTLDHQRDSDLWFCQFSPDGSYLA---TGGKDANVDVWRVDSVRHAVSFFRVLTTPAYIG 266

Query: 394 APTWSPSGRSLI 405
              WSP  + L 
Sbjct: 267 CLCWSPDSKKLA 278


>gi|190345057|gb|EDK36870.2| hypothetical protein PGUG_00968 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 699

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 71/214 (33%), Gaps = 19/214 (8%)

Query: 198 RDGAN--IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           RD  N  I          ++   FSP+   VA A+ D    +R++ +D+       +   
Sbjct: 433 RDPHNNDISRRLVGHSGPVYNVAFSPDNHYVASASED--KSVRLWSLDSYTGLVAYKGHT 490

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSS 314
               +    FS  G     +   D+   ++  D       R+      ++    + P+S+
Sbjct: 491 AP--VWDVAFSPWGHYFA-TASHDQTARLWGTDHIY--ALRIFAGHINDVECVQFHPNSN 545

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             VF    +   +++       +  RI             SP G  +A    +GE   + 
Sbjct: 546 Y-VFTGSADKTCRMW--DVQSGNCVRIFMGHTGPVNCMAVSPDGRWLA---SAGEDSVVN 599

Query: 375 VMK-KDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
           +     G + + +         +  WS  G  ++
Sbjct: 600 LWDCNSGRRIKAMRGHGRNSIYSLAWSREGNVVV 633


>gi|167761773|ref|ZP_02433900.1| hypothetical protein BACSTE_00111 [Bacteroides stercoris ATCC
           43183]
 gi|167700409|gb|EDS16988.1| hypothetical protein BACSTE_00111 [Bacteroides stercoris ATCC
           43183]
          Length = 859

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 66/223 (29%), Gaps = 39/223 (17%)

Query: 254 GNFRSMILAPRFSSNGKRAL------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
             F S + +   S NGK  L       S+++         +L++            +   
Sbjct: 216 TAFGSRVRSVSLSPNGKYLLACYADNYSLKRS-RTRCELTELKTGRVIL----PAADEKM 270

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + P S+++ +      +  L V       ++ + +D    YF   WSP  D + ++   
Sbjct: 271 RWMPRSNKLYYTVTGRQRNDLVVFDPATMREEVLLKDVPEGYF--AWSPAEDYLIYSPDD 328

Query: 368 GE-----------------------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                                     + +      G  ERL      +     S  G+ L
Sbjct: 329 KGEAVGGPLKRLLHPDDRIPDARSRNYLVRYDPVTGLSERLTYGSHAVYLNDISSDGKKL 388

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           + S  K   T        L    E  + T    +   W  +++
Sbjct: 389 LCSTSKSNITQC---PFSLTSIFELDLATLQADTLVAWDPYVN 428



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 72/242 (29%), Gaps = 52/242 (21%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE------- 234
              V+G  +N L V D   A +R     +D       +SP +  + Y+  D         
Sbjct: 280 YYTVTGRQRNDLVVFDP--ATMREEVLLKDVPEGYFAWSPAEDYLIYSPDDKGEAVGGPL 337

Query: 235 -------------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
                              +    +    +R+      +     SS+GK+ L S  K   
Sbjct: 338 KRLLHPDDRIPDARSRNYLVRYDPVTGLSERLTYGSHAVYLNDISSDGKKLLCSTSKSNI 397

Query: 282 MD-------IYSVDLQSNATERLTNTLFINISASYSPDSSQ-------IVFESDREGKE- 326
                    I+ +DL +   + L         A+YSP+  Q       + F  D  GK  
Sbjct: 398 TQCPFSLTSIFELDLATLQADTLVAWDPYVNRAAYSPNGGQLLVIGSPMAF--DGIGKNC 455

Query: 327 -----------QLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKFAIG 374
                      Q +++         I++D   +     W+   G  I F     +   I 
Sbjct: 456 GEHPIANDFDTQAFIVDKATKKVNPITRDFNPAVDFLQWNRVDGC-IYFNTTDEDCRHIY 514

Query: 375 VM 376
             
Sbjct: 515 RY 516


>gi|73921225|sp|Q58D20|NLE1_BOVIN RecName: Full=Notchless protein homolog 1
          Length = 485

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 62/178 (34%), Gaps = 26/178 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCQGHRHW 158

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQ--KRISQDKEA----SYFDPVWS 355
            +S S+SPD  ++       G    Q+ +   +   Q  + ++   +     S+     +
Sbjct: 159 VLSISWSPDGKKLA-----SGCKNGQILLWDPSTGKQVGRALTGHSKWITALSWEPLHAN 213

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKD 411
           P+   +A +   G    + V     G  ER L   +  +    W   G  L++S  +D
Sbjct: 214 PECRYVASSSKDGS---VRVWDTTAGRCERTLTGHAQSVTCLRWGGDG--LLYSASQD 266



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  I   S     + +
Sbjct: 340 GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVVFSPDSRVIASASF---DKSI 396

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 397 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLSTDLPGH 455

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 456 ADEVYAVDWSPDGQRVA 472



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 19/177 (10%), Positives = 52/177 (29%), Gaps = 14/177 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 131 SGSGDTTVRFWDLSTETPHFTCQGHRHWVLSISWSPDGKKLA---SGCKNGQILLWDPST 187

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +  + +      I A  +     +   +    S  KD ++ ++           LT  
Sbjct: 188 GKQVGRALTGHSKWITALSWEPLHANPECRYVA-SSSKDGSVRVWDT-TAGRCERTLTGH 245

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                   +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 246 AQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 298



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 37/100 (37%), Gaps = 6/100 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDD 233
           +++F  +S V         +   DG   +YL         +++  +S + + +   + D 
Sbjct: 377 QVVFSPDSRVIASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 436

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                + + D +  +    +      + A  +S +G+R  
Sbjct: 437 ----TLKVWDVKAQKLSTDLPGHADEVYAVDWSPDGQRVA 472



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 13/115 (11%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            A  R T++L  +  A    ++SP    +   S   G   +     +        Q    
Sbjct: 101 RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGS---GDTTVRFWDLSTETPHFTCQGHRH 157

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAP-TWSP 399
                 WSP G  +A    +G    I +      ++  R L   S      +W P
Sbjct: 158 WVLSISWSPDGKKLASGCKNG---QILLWDPSTGKQVGRALTGHSKWITALSWEP 209


>gi|313204296|ref|YP_004042953.1| hypothetical protein Palpr_1829 [Paludibacter propionicigenes WB4]
 gi|312443612|gb|ADQ79968.1| hypothetical protein Palpr_1829 [Paludibacter propionicigenes WB4]
          Length = 804

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 55/156 (35%), Gaps = 18/156 (11%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISA-SYSPDSSQIVFES 320
            +S + K+   +      ++++ +D+ S    RLT         +  ++  DS Q++   
Sbjct: 122 TWSPDEKKIAFTNTTSHGVELWVLDIVSAQAARLTEPVVNANMGNPLNWYRDSKQLLVRL 181

Query: 321 DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKF------AI 373
             + +  L  + +     K  I    + S       P    +       E F       +
Sbjct: 182 LPKNRPAL--LDTKSELPKGPIISVSDGSKSQNRTYPD---LLKNATDEENFVTLSSSEL 236

Query: 374 GVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIFSR 408
             +  D   E  L +  ++ A  ++SP G  ++ + 
Sbjct: 237 YKVDLDAKSE--LFKGKDMYAGESFSPDGNYILVTT 270



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 4/64 (6%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAP-TWSPSG 401
            A      WSP    IAFT  +     + V+    +Q   L E    +N+  P  W    
Sbjct: 115 NARIAYVTWSPDEKKIAFTNTTSHGVELWVLDIVSAQAARLTEPVVNANMGNPLNWYRDS 174

Query: 402 RSLI 405
           + L+
Sbjct: 175 KQLL 178


>gi|303245945|ref|ZP_07332227.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
 gi|302492728|gb|EFL52596.1| conserved hypothetical protein [Desulfovibrio fructosovorans JJ]
          Length = 422

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 52/168 (30%), Gaps = 37/168 (22%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           ++ P FS +  K+A        +  V +  T  D     + +          S  G R  
Sbjct: 272 VWHPAFSADGSKLAAIVAPSFGVFTVAVDGTPWDATFPVVTDL-------AISPAGGRVA 324

Query: 274 ---------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
                     +V  D  +     D+                   +S D + +    +R G
Sbjct: 325 AIGNDQNTNFTVICDGKVWSGQYDMA--------------WPLVWSADGAHLAVAVERAG 370

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +   + +  +G    + S DK    FDP +SP G  +     +  K  
Sbjct: 371 R---FTVVCDGKAYPQ-SFDK---CFDPAFSPDGTKVLIRAIADGKLH 411



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 48/155 (30%), Gaps = 16/155 (10%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            +  P FS++G +    V     +   +VD           T  +    + SP   ++  
Sbjct: 271 QVWHPAFSADGSKLAAIVAPSFGVFTVAVDG-----TPWDATFPVVTDLAISPAGGRVAA 325

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             + +      +         ++   +    +  VWS  G  +A       +F    +  
Sbjct: 326 IGNDQNTNFTVICD------GKVWSGQYDMAWPLVWSADGAHLAVAVERAGRF---TVVC 376

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           DG       +      P +SP G  ++     DG 
Sbjct: 377 DGKAYPQSFD--KCFDPAFSPDGTKVLIRAIADGK 409


>gi|289673912|ref|ZP_06494802.1| hypothetical protein PsyrpsF_11697 [Pseudomonas syringae pv.
           syringae FF5]
          Length = 273

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/179 (13%), Positives = 69/179 (38%), Gaps = 23/179 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FSS+GK   +  +    +  ++++ ++ A ++ +    I    + +P  ++    +D +
Sbjct: 102 AFSSDGKFLYVVGEMSGTVTAFAINQKNGALKQTSQADGIPKRLNLAPGQARDARNNDLK 161

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ- 382
                 +  ++                    +P G  +  ++ +    ++  ++    + 
Sbjct: 162 DDPTPRIWAAD-----------------IRIAPNGKWLFISERTSSSVSVFKVEPTNGKV 204

Query: 383 ---ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
              E   V++   +    SP+GR L+ S ++    GS  Y+I   G  + + + P+   
Sbjct: 205 AFVENYPVQEKQPRNIAVSPNGRWLLVSGEQSDKVGS--YAIGEKGALQRVGDAPSGKG 261


>gi|218258730|ref|ZP_03475039.1| hypothetical protein PRABACTJOHN_00695 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225256|gb|EEC97906.1| hypothetical protein PRABACTJOHN_00695 [Parabacteroides johnsonii
           DSM 18315]
          Length = 733

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 43/275 (15%), Positives = 89/275 (32%), Gaps = 56/275 (20%)

Query: 219 FSPNQQKVAYATYDDE-----------------------------DILRVYLMDTRIDRA 249
           +SPN   +A+   D+                                + V + +    + 
Sbjct: 200 WSPNGSALAFYRMDESMVTDYPFVDITARCAKAEPHKYPMAGMKSHEVTVGVYNLATGKT 259

Query: 250 PKRIGNFRS--MILAPRFSSNGKRALIS-VQKDEA-MDIYSVDLQSNATE--RLTNTLFI 303
                       +    +S + K   I+ + +D+  M +      +   E    T     
Sbjct: 260 VWLKTGLPKEKYLTNIAWSPDEKSIYIAELNRDQNEMHLVRYSALTGEKEADLFTEKNEH 319

Query: 304 NISAS----YSPDS-SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +       + P++  Q +++S R+G   LY+  + G   K++++ +        +  +G
Sbjct: 320 YVEPQHPVLFLPNNPDQFIWQSRRDGYNHLYLYNTKGELLKQLTEGEWEVLNILGFDAKG 379

Query: 359 DLIAFTKFS---------GEKFAIGVMKKD---GSQERLLVED-SNLQAPTWSPSGRSLI 405
             + F+            G+   +G  + D   G+   L       + A   S SG+ LI
Sbjct: 380 KALFFSSTRPSMLSSFSYGDALYVGTSRLDLKKGTSYELTSGGLQGVHATQLSASGKYLI 439

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                  D   ++  ID  G+    + T   A DP
Sbjct: 440 -DSYSAPDVPREISIID--GQKRETLRTLLTAKDP 471



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/180 (10%), Positives = 51/180 (28%), Gaps = 35/180 (19%)

Query: 210 RDQILFEPRFSPNQQKVA---------------YATYDDEDILRVYLMDTRIDRAPKRIG 254
           +++ L    +SP+++ +                Y+    E    ++         P+   
Sbjct: 268 KEKYLTNIAWSPDEKSIYIAELNRDQNEMHLVRYSALTGEKEADLFTEKNEHYVEPQHPV 327

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDS 313
            F           +  + +   ++D    +Y  + +    ++LT   +  ++   +    
Sbjct: 328 LFLPNN------PD--QFIWQSRRDGYNHLYLYNTKGELLKQLTEGEWEVLNILGFDAKG 379

Query: 314 SQIVFESDR-------EGKEQLYV----MQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             + F S R          + LYV    +         ++            S  G  + 
Sbjct: 380 KALFFSSTRPSMLSSFSYGDALYVGTSRLDLKKGTSYELTSGGLQGVHATQLSASGKYLI 439


>gi|190896148|gb|ACE96587.1| U5 snRNP-specific protein-like factor [Populus tremula]
          Length = 215

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 71/227 (31%), Gaps = 23/227 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +       + +  ++ +  ++  A+ D      V   D    +  K++    S + + 
Sbjct: 4   FMVMRGHKNAVLDLHWTADGSQIISASPDK----TVRAWDVDTGKQIKKMAEHSSFVNSC 59

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S  G   ++S   D    ++  DL+     +     +   + S+S D+S  +F    +
Sbjct: 60  CPSRRGPPLVVSGSDDGTSKLW--DLRQKGAIQTFPDKYQITAVSFS-DASDKIFTGGID 116

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + V      +     +  +        SP G  +  T     K  I  M+    Q 
Sbjct: 117 --NDVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLL-TNGMDNKLCIWDMRPYAPQN 173

Query: 384 R--LLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           R   + E             +WSP G  +       G     +Y  D
Sbjct: 174 RCVKIFEGHQHNFEKNLLKCSWSPDGSKV-----TAGSADRMVYIWD 215


>gi|28378817|ref|NP_785709.1| hypothetical protein lp_2219 [Lactobacillus plantarum WCFS1]
 gi|254557023|ref|YP_003063440.1| hypothetical protein JDM1_1856 [Lactobacillus plantarum JDM1]
 gi|308181016|ref|YP_003925144.1| hypothetical protein LPST_C1834 [Lactobacillus plantarum subsp.
           plantarum ST-III]
 gi|28271654|emb|CAD64560.1| unknown [Lactobacillus plantarum WCFS1]
 gi|254045950|gb|ACT62743.1| conserved hypothetical protein [Lactobacillus plantarum JDM1]
 gi|308046507|gb|ADN99050.1| hypothetical protein LPST_C1834 [Lactobacillus plantarum subsp.
           plantarum ST-III]
          Length = 339

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/261 (14%), Positives = 87/261 (33%), Gaps = 29/261 (11%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           + AH + + +    T            +  S         +  +  DGA    LT +   
Sbjct: 73  QTAHKL-NTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGA--LTLTDTVQH 129

Query: 213 ILFEPRFSPNQQKVAYATYDDEDIL--------RVYLMDT-RIDRAPKRIGNFRSMILAP 263
               PR   +   + Y     ++ L        +VY+ +     +  ++          P
Sbjct: 130 SGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGP 189

Query: 264 R---FSSNGKRALISVQKDEAMDIYSVDLQSNATERL-------TNTLFINISASY--SP 311
           R   FS +G+ A ++ +    +     D Q+ A  +L        +    N +A+   S 
Sbjct: 190 RHLVFSPDGQYAFLAGELSSQIASLKYDAQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH 249

Query: 312 DSSQIVFESDREGKE-QLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           D    ++ S+R      ++ + ++G  +  ++IS + +    D    P    +     + 
Sbjct: 250 DG-HFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGD-FPRDFDLDPTEAFVVVVNQNT 307

Query: 369 EKFAIGVMKKDGSQERLLVED 389
           +   +        +  LL +D
Sbjct: 308 DNATLYARDLTSGKLSLLQKD 328


>gi|12652891|gb|AAH00201.1| WD repeat domain 1 [Homo sapiens]
 gi|62897353|dbj|BAD96617.1| WD repeat-containing protein 1 isoform 1 variant [Homo sapiens]
 gi|119613092|gb|EAW92686.1| WD repeat domain 1, isoform CRA_a [Homo sapiens]
 gi|168277844|dbj|BAG10900.1| WD repeat protein 1 [synthetic construct]
          Length = 606

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 85/268 (31%), Gaps = 40/268 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTE----HAHQVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 65  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---------GANIRYL 206
                          G+       ++   +       L     D             ++ 
Sbjct: 125 EKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFT 184

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
                + +   RFSP+  + A A+ D     ++Y+ D +       +G  +     I A 
Sbjct: 185 VGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAI 240

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +S +    L S   D+   I+ V + S
Sbjct: 241 SWSPDSTHLL-SASGDKTSKIWDVSVNS 267


>gi|298209291|ref|YP_003717470.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
 gi|83849218|gb|EAP87087.1| OmpA family protein [Croceibacter atlanticus HTCC2559]
          Length = 665

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/254 (14%), Positives = 76/254 (29%), Gaps = 59/254 (23%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS    + AY   +  D LR    ++      +   N         FS N  + + +  
Sbjct: 130 TFSSKDDR-AYLFTEQPDYLREINYNSGSYEITRTAINSTYSDFGTAFSEN--KLVFASS 186

Query: 278 KDEAMDI----------------YSVDLQSNATERLTNTLFI------NISASYSPDSSQ 315
           +D    I                 S++  +     +              + +++ D + 
Sbjct: 187 RDTGAFIKRIYEWTGDPFLDLYEVSINPANGELSEVKKYKGNLNSIFHESTPAFTKDGNT 246

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           + F  +       Y     G+++ ++ +   +S      +P    + F            
Sbjct: 247 VYFTKN-NYNNGSYREDEKGTNKLKLYKATRSSDSKDFGTP--KEMPFNS---------- 293

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDL--NGRNETL-- 430
                       ++ +   PT SP  + L FS    G  G S ++ +D+  +G       
Sbjct: 294 ------------DEYSTAHPTLSPDEKKLFFSSDMPGSEGLSDIWVVDILSDGSYSEPRN 341

Query: 431 ----INTPAYASDP 440
               INT    + P
Sbjct: 342 LGEGINTAGRETFP 355



 Score = 36.9 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 51/148 (34%), Gaps = 16/148 (10%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIG 254
           G        S +     P  SP+++K+ +++         DI  V ++       P+ +G
Sbjct: 284 GTPKEMPFNSDEYSTAHPTLSPDEKKLFFSSDMPGSEGLSDIWVVDILSDGSYSEPRNLG 343

Query: 255 ---NFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTNTLFINISAS 308
              N       P  +++G     +         +DI+  ++     E ++  + I   A+
Sbjct: 344 EGINTAGRETFPFMTASGD-MYFASDGHIGLGGLDIFVTNV--TDAETISEIINIGEPAN 400

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGS 336
            S D     F  D + K        NG 
Sbjct: 401 SSRDD--FAFVIDEDTKFGYLSSNRNGG 426


>gi|331694257|ref|YP_004330496.1| acylaminoacyl-peptidase [Pseudonocardia dioxanivorans CB1190]
 gi|326948946|gb|AEA22643.1| Acylaminoacyl-peptidase [Pseudonocardia dioxanivorans CB1190]
          Length = 614

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 58/175 (33%), Gaps = 3/175 (1%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATY 231
           +  +L +S S         + V+   D + +   +    + L    FSP    +     +
Sbjct: 176 DETLLAISHSEHGDSRHPDVRVVRTADASTVAEKSDGPGRGLTPLVFSPVAGDQRLLLLH 235

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           +      + + D   D   + + +    ++A  F  +    L+       + +Y  DL+ 
Sbjct: 236 ERRGREELLIWDVATDTETEVLLDLPGELVA-DFYPDATALLVWHTHAGRVRLYRHDLRD 294

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
                L        SA   PD +     S       +  +  +G+D+  ++   E
Sbjct: 295 GTLTELPTAPGTVGSAEVRPDGTVEYTASSAAAPVSIRALHPDGTDRVLVAPPGE 349



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 27/224 (12%), Positives = 70/224 (31%), Gaps = 17/224 (7%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +  A    +D  R+++   R     + I            S +     IS  +    
Sbjct: 133 GRTLVAAGTSTDDGSRIWVR--RDGADTEMIYEHAEDAGVGALSEDETLLAISHSEHGDS 190

Query: 283 D------IYSVDLQSNATERLTNTLFINISA-SYSP--DSSQIVFESDREGKEQLYVMQS 333
                  + + D  + A +  ++     ++   +SP     +++   +R G+E+L +   
Sbjct: 191 RHPDVRVVRTADASTVAEK--SDGPGRGLTPLVFSPVAGDQRLLLLHERRGREELLIWDV 248

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNL 392
               +  +  D         + P    +        +  +      DG+   L      +
Sbjct: 249 ATDTETEVLLDLPGELVADFY-PDATALLVWHTHAGRVRLYRHDLRDGTLTELPTAPGTV 307

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            +    P G  + ++        S + ++  +G +  L+  P  
Sbjct: 308 GSAEVRPDGT-VEYTASSAAAPVS-IRALHPDGTDRVLVAPPGE 349


>gi|307199461|gb|EFN80074.1| TAF5-like RNA polymerase II p300/CBP-associated factor-associated
           factor 65 kDa subunit 5L [Harpegnathos saltator]
          Length = 440

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 38/100 (38%), Gaps = 5/100 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ +  +D  N+  +       ++   FSP+ + +A       D   + + D  
Sbjct: 335 TGSADKTVRLWSKDDGNLLRVYVGAQSTIYSLAFSPDGKYLA----AAGDDKSISIWDLA 390

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +     +   +  ++   +S +G+    S   D  + ++
Sbjct: 391 TNAVLTELKGHKDTVMHVDWSLDGQYIA-SASIDGIVRLW 429



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 56/143 (39%), Gaps = 16/143 (11%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQS 333
           +   D    ++S+D       R+    F++++   + P++  +   S     + + +   
Sbjct: 293 TGSHDRTAKLWSLDRTF--PLRIFAGHFLDVNCVKFHPNARYLATGS---ADKTVRLWSK 347

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----D 389
           +  +  R+    +++ +   +SP G  +A    +G+  +I +     +   +L E     
Sbjct: 348 DDGNLLRVYVGAQSTIYSLAFSPDGKYLA---AAGDDKSISIWDLATNA--VLTELKGHK 402

Query: 390 SNLQAPTWSPSGRSLIFSRKKDG 412
             +    WS  G+ +  S   DG
Sbjct: 403 DTVMHVDWSLDGQYIA-SASIDG 424


>gi|297622609|ref|YP_003704043.1| hypothetical protein Trad_0361 [Truepera radiovictrix DSM 17093]
 gi|297163789|gb|ADI13500.1| hypothetical protein Trad_0361 [Truepera radiovictrix DSM 17093]
          Length = 256

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 19/118 (16%)

Query: 238 RVYLMDTRIDR-----APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           RVYL D    +      P+R G          FS +GK   +++  +    IY++ L S+
Sbjct: 62  RVYLQDVISGKVTLLTTPERFGEHFYAEGG-IFSPDGKTVFVNIDTENNWAIYAISLNSS 120

Query: 293 ATERLTNTLFI---------NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
               +     +           S + SPD  Q+ F + R     + +M  + + +K +
Sbjct: 121 KVTLIAEDRSVLDGALIGILGRSLAISPDGHQLAFRASRT----VSLMNLDTASRKGV 174



 Score = 43.1 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 19/133 (14%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTL-----FINISASYSPDSSQIVFESDREGKEQLY 329
           +V  D    +Y  D+ S     LT        F      +SPD   +    D E    +Y
Sbjct: 56  TVTTDGR--VYLQDVISGKVTLLTTPERFGEHFYAEGGIFSPDGKTVFVNIDTENNWAIY 113

Query: 330 VMQSNGSDQKRISQDKEASYFD--------PVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +  N S    I++D+                 SP G  +AF         + +M  D +
Sbjct: 114 AISLNSSKVTLIAEDRSVLDGALIGILGRSLAISPDGHQLAFRASR----TVSLMNLDTA 169

Query: 382 QERLLVEDSNLQA 394
             + ++     + 
Sbjct: 170 SRKGVLSPFTTEH 182



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 41/115 (35%), Gaps = 18/115 (15%)

Query: 327 QLYVMQSNGSDQKRISQD---KEASYF-DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           ++Y+          ++      E  Y    ++SP G  +     +   +AI  +  + S+
Sbjct: 62  RVYLQDVISGKVTLLTTPERFGEHFYAEGGIFSPDGKTVFVNIDTENNWAIYAISLNSSK 121

Query: 383 ERLLVEDSNL----------QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             L+ ED ++          ++   SP G  L F   +       L ++D   R 
Sbjct: 122 VTLIAEDRSVLDGALIGILGRSLAISPDGHQLAFRASR----TVSLMNLDTASRK 172


>gi|294054502|ref|YP_003548160.1| surface layer protein [Coraliomargarita akajimensis DSM 45221]
 gi|293613835|gb|ADE53990.1| surface layer protein [Coraliomargarita akajimensis DSM 45221]
          Length = 603

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 73/230 (31%), Gaps = 40/230 (17%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + R L+V+   V G +     V    G     +          P  SP+  ++       
Sbjct: 86  DGRTLYVTGGGVRGRV---FVVEAASGKLEHTIDVGHSPTA--PVLSPDGSRLYVCNQFS 140

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDI-------Y 285
            D   V ++D    +  +RI   R  + A   S +G++  ++ +      DI        
Sbjct: 141 SD---VSIIDLTEGKETQRIPLVREPV-AADLSKDGRQLFVANLIPAGRADIDYVAAVVS 196

Query: 286 SVDLQSNATE--RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS------- 336
            VD  +  T    L N          SPD +  VF +    + Q+   Q           
Sbjct: 197 VVDTDTGETSEIPLVNGAVGLYGLKVSPDGN-FVFVTHMVARHQVSTTQLERGWVATNAL 255

Query: 337 ------DQKRISQD-------KEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                 D+K +            A+ +   +S  G  I  +   G + ++
Sbjct: 256 SIIRVADKKLLYTALLDDPNLGFANAWAIDFSDDGKQIIVSAAGGHELSV 305



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 64/187 (34%), Gaps = 26/187 (13%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           ED   + L+D+      KRI    +   A   S++G+   ++        ++ V+  S  
Sbjct: 53  EDAEAIMLLDSETLEVSKRI-ELPTKPSATAVSNDGRTLYVTG-GGVRGRVFVVEAASGK 110

Query: 294 TERLTNTLFINISASYSPDSSQIV----FESDREGKEQLYVMQS-NGSDQKRISQDKEAS 348
            E   +      +   SPD S++     F SD      + ++    G + +RI   +E  
Sbjct: 111 LEHTIDVGHSPTAPVLSPDGSRLYVCNQFSSD------VSIIDLTEGKETQRIPLVREP- 163

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFA--------IGVMKKDGSQ--ERLLVEDS-NLQAPTW 397
                 S  G  +          A        + V+  D  +  E  LV  +  L     
Sbjct: 164 -VAADLSKDGRQLFVANLIPAGRADIDYVAAVVSVVDTDTGETSEIPLVNGAVGLYGLKV 222

Query: 398 SPSGRSL 404
           SP G  +
Sbjct: 223 SPDGNFV 229


>gi|256397927|ref|YP_003119491.1| hypothetical protein Caci_8837 [Catenulispora acidiphila DSM 44928]
 gi|256364153|gb|ACU77650.1| hypothetical protein Caci_8837 [Catenulispora acidiphila DSM 44928]
          Length = 673

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 61/166 (36%), Gaps = 26/166 (15%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER----------LTNTLFINISASYS 310
             P +  +G  A++  +K  A     ++       +          L      ++S    
Sbjct: 118 SHPAW-IDGGSAVVWSEK-AAGKNAVLNWAYGNGVQGSGGAPTVQTLRTLSGSDLSH--- 172

Query: 311 PD--SSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           PD   S +V++ +   K  Q+Y+     ++   +     A+ +DP  S  G  +AF   +
Sbjct: 173 PDSVGSLLVYQVNTPNKAPQIYLWNRAQANSAPVLI---ATGWDPSISADGTHVAFVTTT 229

Query: 368 G-----EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                   + + +    G+  ++         P ++P+G  L+F R
Sbjct: 230 ASPAGTNVYTVALSNPSGTLNQVTAGGGGFANPVYTPNGTGLVFER 275



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 64/239 (26%), Gaps = 23/239 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN      A+             T      K    F        ++  G RA      D
Sbjct: 37  SPNGT----ASLTVSGGSSAAPSGTSTVTGTKYALGFAPAAANLAWAPTGARAAWI---D 89

Query: 280 EAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDREGKEQLYVMQSN-- 334
            A       +   A E +             ++    S +V+     GK  +        
Sbjct: 90  PASGAVVAGVPGGAAEVIAPAPASGTARSHPAWIDGGSAVVWSEKAAGKNAVLNWAYGNG 149

Query: 335 --GSDQKRISQDKEASYFDPVWSPQ--GDLIAF-TKFSGEKFAIGVMK-KDGSQERLLVE 388
             GS      Q         +  P   G L+ +      +   I +      +   +L+ 
Sbjct: 150 VQGSGGAPTVQTLRTLSGSDLSHPDSVGSLLVYQVNTPNKAPQIYLWNRAQANSAPVLIA 209

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL---NGRNETLINTPAYASDPQWVG 444
                 P+ S  G  + F        G+ +Y++ L   +G    +       ++P +  
Sbjct: 210 TG--WDPSISADGTHVAFVTTTASPAGTNVYTVALSNPSGTLNQVTAGGGGFANPVYTP 266



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 24/178 (13%), Positives = 52/178 (29%), Gaps = 17/178 (9%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVY------LMDTRIDRAPKRIGNFRSMIL 261
           P+       P +      V ++         +       +  +      + +       L
Sbjct: 111 PASGTARSHPAWIDGGSAVVWSEKAAGKNAVLNWAYGNGVQGSGGAPTVQTLRTLSGSDL 170

Query: 262 APRFSSN--GKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +     +  G   +  V   ++A  IY  +     +  +      +   S S D + + F
Sbjct: 171 S---HPDSVGSLLVYQVNTPNKAPQIYLWNRAQANSAPVLIATGWD--PSISADGTHVAF 225

Query: 319 ---ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
               +   G     V  SN S            + +PV++P G  + F +  G    +
Sbjct: 226 VTTTASPAGTNVYTVALSNPSGTLNQVTAGGGGFANPVYTPNGTGLVFERLDGTGKDV 283


>gi|224090607|ref|XP_002188407.1| PREDICTED: excision repair cross-complementing rodent repair
           deficiency, complementation group 8 [Taeniopygia
           guttata]
          Length = 399

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 63/192 (32%), Gaps = 15/192 (7%)

Query: 112 VTGRVI-KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           V GR +   G D + V + L ++  +     K FFS   S   + H  S +  Q    + 
Sbjct: 54  VEGRYMLSGGSDGVIVLYDLENLSRKPSYTCKAFFSVGRSHPDV-HKFSVETVQWYPHDT 112

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G F S                +L + D +      +    +  ++    SP   K     
Sbjct: 113 GIFTSS-----------SFDKTLKIWDTNTLQPADIFHF-EGTVYSHHMSPVATKHCLIA 160

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              +   +V L D +   +   +   R  +LA  +S   +  L +   D  + ++ V   
Sbjct: 161 VGTKSP-KVQLCDLKSGSSSHILQGHRQEVLAVSWSPRHEYVLATGSADGRVKLWDVRRA 219

Query: 291 SNATERLTNTLF 302
           S     L     
Sbjct: 220 SGCLSTLDQYNG 231


>gi|3420181|gb|AAD05045.1| WDR1 protein [Homo sapiens]
          Length = 534

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 86/268 (32%), Gaps = 40/268 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTE----HAHQVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 65  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-------GANIRYLTP 208
                          G+       ++   +       L     D       G   ++   
Sbjct: 125 EKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFT 184

Query: 209 SRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
             D   F    RFSP+  + A A+ D     ++Y+ D +       +G  +     I A 
Sbjct: 185 IGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAI 240

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +S +    L S   D+   I+ V + S
Sbjct: 241 SWSPDSTHLL-SASGDKTSKIWDVSVNS 267


>gi|16262751|ref|NP_435544.1| CyaF4 adenylate cyclase [Sinorhizobium meliloti 1021]
 gi|14523380|gb|AAK64956.1| CyaF4 adenylate cyclase [Sinorhizobium meliloti 1021]
          Length = 629

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 62/155 (40%), Gaps = 10/155 (6%)

Query: 48  VSIAFTKFVSIDELGGKVSE-----VVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           V++        DE  G++++     +++ DL R   F +I+++S +        +     
Sbjct: 219 VAVLPFDNYGGDEASGRLADGLTEDIIT-DLARFPEFKVIARNSTETYKGKAIDVREIG- 276

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI 162
             +L    +V G + +E  DR+RV  +L D K  + +  +++         I   I++ I
Sbjct: 277 -KALDVGFVVEGSIAREA-DRVRVTAQLIDSKQGRHLWSQRWDRPDKEVFVIQAEIAEQI 334

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIK-NSLCVM 196
              + G  G         +   V G +    L ++
Sbjct: 335 ANRLGGGAGLVQESGRIAAHRKVPGNLNAYELYLL 369


>gi|302815679|ref|XP_002989520.1| hypothetical protein SELMODRAFT_129893 [Selaginella moellendorffii]
 gi|300142698|gb|EFJ09396.1| hypothetical protein SELMODRAFT_129893 [Selaginella moellendorffii]
          Length = 890

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 64/191 (33%), Gaps = 8/191 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ Q +A    D++    V L +              + + A  F + G  A++S  
Sbjct: 376 AYSPDSQLIATGADDNK----VKLWNAASGFCFVTFAEHTNAVTAVLFLA-GSNAVLSAS 430

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  +  + + ++       T T       S + D S  +  +      Q+YV     + 
Sbjct: 431 LDGTVRAWDL-MRYRNFRTFT-TPAPTQFVSLAADQSGEIICAGTLDTFQIYVWSMKTAR 488

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              +    E       +SP  + +A + +        V +  G  E       ++    +
Sbjct: 489 LVDVLSGHEGPVHGLAFSPTDEFLASSSWDKTVRLWDVFEGKGGVE-AFTHTHDVLTVVY 547

Query: 398 SPSGRSLIFSR 408
            P G+ L  S 
Sbjct: 548 RPDGKQLACST 558



 Score = 40.4 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 40/132 (30%), Gaps = 14/132 (10%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + + R              +     S NG    + +  D +     V L        
Sbjct: 35  RISVTELRKSECWTLPVENGGDVSRVAVSPNG---ALLLSIDASGRCILVSLARRILLHR 91

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV---- 353
            +      +  +SPD S       R     L V ++ G  ++ ++     ++        
Sbjct: 92  MSFKAPVTALGFSPDGSLFAVAMGR----LLQVWRTPGCRKEFMAFQLLHTFSSSHDTIT 147

Query: 354 ---WSPQGDLIA 362
              WSP G+ I 
Sbjct: 148 CLGWSPDGNWII 159


>gi|241155731|ref|XP_002407629.1| apoptotic protease-activating factor, putative [Ixodes scapularis]
 gi|215494149|gb|EEC03790.1| apoptotic protease-activating factor, putative [Ixodes scapularis]
          Length = 1174

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 13/120 (10%)

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL-IAFTKFSG 368
            SPD   ++  S     + L +  S   + +R +++ EA      +SP     +A      
Sbjct: 1018 SPDGRHLLSGSS---DKNLCLWDSETGELQR-TKELEACVRCCCFSPDAHHPLAAAGTDD 1073

Query: 369  EKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                + V    DGS  RL    S ++   +S  GR L    +         + +D +GR 
Sbjct: 1074 GT--VYVYHPNDGSVARLGCHSSFVRDLAFSSDGRQLASLSES-----VCWWRLDADGRT 1126


>gi|195148536|ref|XP_002015229.1| GL19588 [Drosophila persimilis]
 gi|194107182|gb|EDW29225.1| GL19588 [Drosophila persimilis]
          Length = 777

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 14/146 (9%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--LQSNATERL 297
           +++  +  R  + I    + I + R+S +G   L +  +D  + I+S    L+S   +  
Sbjct: 104 FIILNKSARVERSISAHGAAISSGRWSPDGAGLL-TAGEDGVIKIWSRSGMLRSTVVQ-- 160

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            N   I   A ++P+S+ IVF   + G   +  + +N    +   +  +       WS Q
Sbjct: 161 -NEEAIRC-ARWAPNSTSIVFC--QGGHISIKPLAANSKSIR--WRAHDGLVLSLSWSAQ 214

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQE 383
            ++IA     GE F   +    G+  
Sbjct: 215 SNIIA---SGGEDFRFKIWDAQGANL 237



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 71/218 (32%), Gaps = 18/218 (8%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLT 207
              R I    S  + +SI+      +S       + + +      + +  R G  +R   
Sbjct: 100 NDGRFIILNKSARVERSISAHGAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM-LRSTV 158

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              ++ +   R++PN   + +          + +     +    R      ++L+  +S+
Sbjct: 159 VQNEEAIRCARWAPNSTSIVFC-----QGGHISIKPLAANSKSIRWRAHDGLVLSLSWSA 213

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                  S  +D    I+  D Q           +   S +++P+   ++      G   
Sbjct: 214 QSNIIA-SGGEDFRFKIW--DAQGANLFTSAAEEYAITSVAFNPEKEFLLV-----GTFN 265

Query: 328 LYVMQSNGS---DQKRISQDKEASYFDPVWSPQGDLIA 362
           +  +  +     +  R +     S+F   WS  G  +A
Sbjct: 266 MLKLCHSTGWSYNSARFTAPSVGSFFTLAWSSDGTQVA 303


>gi|114583974|ref|XP_001149658.1| PREDICTED: APG16 autophagy 16-like isoform 4 [Pan troglodytes]
          Length = 480

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 56/308 (18%), Positives = 107/308 (34%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG + +          +LW+V   K         S A    I     D    
Sbjct: 204 SPGSRLLATGGMDR--------RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGS 252

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 253 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 294

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 295 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 346

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 347 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 400

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 401 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 458

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 459 SPSGSHVV 466


>gi|62897087|dbj|BAD96484.1| WD repeat-containing protein 1 isoform 1 variant [Homo sapiens]
          Length = 606

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 85/268 (31%), Gaps = 40/268 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTE----HAHQVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 65  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---------GANIRYL 206
                          G+       ++   +       L     D             ++ 
Sbjct: 125 EKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFT 184

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
                + +   RFSP+  + A A+ D     ++Y+ D +       +G  +     I A 
Sbjct: 185 VGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAI 240

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +S +    L S   D+   I+ V + S
Sbjct: 241 SWSPDSTHLL-SASGDKTSKIWDVSVNS 267


>gi|170743970|ref|YP_001772625.1| hypothetical protein M446_5908 [Methylobacterium sp. 4-46]
 gi|168198244|gb|ACA20191.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
          Length = 390

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 45/253 (17%), Positives = 89/253 (35%), Gaps = 35/253 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            S +   +A      E+ + V  ++ +     +++     ++    F+ NGK A+ S   
Sbjct: 143 ISHDG-TMALVALRAENAVGVLSINGKNVELTQKV-PVDELVSHVEFTPNGKTAIASKFV 200

Query: 279 DEAMDIYSVDLQSN---ATERLTNTLFINISASYSPDSSQIV-----FESDREGK-EQLY 329
           +  + + S++         + L   L+   + S SPD    +     F    +G  + + 
Sbjct: 201 NHKVALLSIESNKKVSYNKQDLPVGLWP-YNVSVSPDGKIALTADNGFAGASDGNVDTVS 259

Query: 330 VMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFA-----------IGVMK 377
           V+    +  + I +       +    SP+GD+      +G               + VMK
Sbjct: 260 VVDLEATPPRVIDKVVVGDGPEGLAISPKGDVAVAVIINGSNSGKKDFFYHKNGTLTVMK 319

Query: 378 KDGSQERL----LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-----NGRNE 428
            DG         L      +A  ++P GR L+     D D    +Y +D       G+  
Sbjct: 320 IDGKTVTKIKEGLETGGLPEAAVFTPDGRYLLVGNFLDQDF--SIYRVDGSNVTDTGKRF 377

Query: 429 TLINTPAYASDPQ 441
            +   PA A   +
Sbjct: 378 KVPGHPASARMGR 390



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 81/220 (36%), Gaps = 26/220 (11%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
             +N++ V+  +G N+        D+++    F+PN +    + + +  +  + +   + 
Sbjct: 155 RAENAVGVLSINGKNVELTQKVPVDELVSHVEFTPNGKTAIASKFVNHKVALLSIESNKK 214

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRAL-----ISVQKDEAMD-IYSVDLQSNATERLTNT 300
               K+             S +GK AL      +   D  +D +  VDL++    R+ + 
Sbjct: 215 VSYNKQDLPVGLWPYNVSVSPDGKIALTADNGFAGASDGNVDTVSVVDLEATPP-RVIDK 273

Query: 301 LFINISA---SYSPDSSQIVFE----SDREGKEQLY-------VMQSNGSDQKRISQD-- 344
           + +       + SP     V      S+   K+  Y       VM+ +G    +I +   
Sbjct: 274 VVVGDGPEGLAISPKGDVAVAVIINGSNSGKKDFFYHKNGTLTVMKIDGKTVTKIKEGLE 333

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                   V++P G  +    F  + F+I   + DGS   
Sbjct: 334 TGGLPEAAVFTPDGRYLLVGNFLDQDFSIY--RVDGSNVT 371


>gi|167901883|ref|ZP_02489088.1| hypothetical protein BpseN_06352 [Burkholderia pseudomallei NCTC
           13177]
          Length = 391

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D L V +R +D    +        +   S+ 
Sbjct: 13  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGLYV-YR-FDTDSGRVSPVSSAKAENPSYL 70

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 71  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 128

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 129 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 188

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 189 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 222

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    +  +       
Sbjct: 223 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLVHVETVPMTAPGF 282

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 283 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 327


>gi|50557378|ref|XP_506097.1| YALI0F31471p [Yarrowia lipolytica]
 gi|49651967|emb|CAG78910.1| YALI0F31471p [Yarrowia lipolytica]
          Length = 553

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 79/248 (31%), Gaps = 27/248 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           +G    +L +   DG N   +T    R        F P+ Q+V       + +       
Sbjct: 258 TGGFDKTLRLYQVDGKNNPVVTTLFMRHTPFAHVAFHPDGQRVYAGGRKQKHLYIWNAES 317

Query: 244 TRIDRAPKRIGNFRSMILAPRF--SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +++R     G+   +    +F  S +GK   +         +  +   S    +  +  
Sbjct: 318 GKVERMAHLYGHGDKVRCFAQFKLSPDGKYLCVVGVDG---WLAILSATSG---QWIDGC 371

Query: 302 FINIS-ASYSPDSSQIVFESDREGKEQLYV---------MQSNGSDQKRISQDKEASYFD 351
            I    A +  D   I+  +      +  V             G     ++   +A+ + 
Sbjct: 372 KIEGDVADFVWDGGSIIAVNTAGQVWEYNVESRSFTATWTDEGGVGITVLAIGGKANQWL 431

Query: 352 PVWSPQGDLIAFTKFS-----GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            + S  G +  + +        +  +  V +K  +    L     + +  +SP G+ L  
Sbjct: 432 AIGSESGYVNVYNRPKLALEIAKGQSPFVPQKPTAVLSNLTTP--VSSLVFSPDGQMLAM 489

Query: 407 SRKKDGDT 414
           +  +  D+
Sbjct: 490 ASDQKRDS 497


>gi|298290993|ref|YP_003692932.1| 40-residue YVTN family beta-propeller repeat protein [Starkeya
           novella DSM 506]
 gi|296927504|gb|ADH88313.1| 40-residue YVTN family beta-propeller repeat protein [Starkeya
           novella DSM 506]
          Length = 485

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 42/230 (18%), Positives = 75/230 (32%), Gaps = 15/230 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+ ++V + T   ED + V    T  ++A  +  N   M +   FS +GK   +    
Sbjct: 134 FTPDGKEV-WVTVRGEDYIAVLDGATYEEKARIKAPNGPGMQI---FSPDGKYGYVCSSF 189

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                + SV        R+          + +PD  Q+ F     GK Q++  Q      
Sbjct: 190 MPETVVISV-ADHEIVGRVKQASPFCPDIAATPDGKQVWFTLKDIGKTQVFNAQPPFDVI 248

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW- 397
           K I      ++ +   +  G     T   G    I V + D   +   +    L    W 
Sbjct: 249 KTIDTGPITNHVNIAHNANGTFANVT--VGGLNEIKVFRTDDFSQVATIPVGKLPHGLWP 306

Query: 398 SPSGRSLIF-------SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           S  G  +             D  T   + +I +    + +   P    + 
Sbjct: 307 SGDGSRIYVGLENADALAAIDTLTNKVIATIPIGQAPQAVTYVPGAVPEG 356



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 53/148 (35%), Gaps = 12/148 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+++ +A  +     +  +    T   +    +G          F+ +GK   ++V+ 
Sbjct: 92  FSPDRKTIAVVSIGSNSVTFIDT-ATNAVKHTTYVGRSPHEAF---FTPDGKEVWVTVR- 146

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                I  +D  +   +             +SPD       S     E + +  ++    
Sbjct: 147 -GEDYIAVLDGATYEEKARIKAPNGPGMQIFSPDGKYGYVCSSFM-PETVVISVADHEIV 204

Query: 339 KRISQDKEASYFDPVW--SPQGDLIAFT 364
            R+   K+AS F P    +P G  + FT
Sbjct: 205 GRV---KQASPFCPDIAATPDGKQVWFT 229


>gi|261823789|ref|YP_003261895.1| Curli production assembly/transport component CsgG [Pectobacterium
           wasabiae WPP163]
 gi|261607802|gb|ACX90288.1| Curli production assembly/transport component CsgG [Pectobacterium
           wasabiae WPP163]
          Length = 223

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 48/129 (37%), Gaps = 21/129 (16%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPV-----SIAFTKFV------- 56
           +N K+ LC + + +      +  +   V         +P       I+  KF        
Sbjct: 1   MNKKVVLCSVFMSVALLSGCATESSRTVEAQKVTSYSTPYQGVRSPISVGKFENRSNYMN 60

Query: 57  -----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVL 111
                 +D LG +   ++   LQ+S  FN++ + + ++         + Q     GA  +
Sbjct: 61  GIFSDGVDRLGNQSKTILVSHLQQSGRFNVLDRTNMEELKAEAGIKGQTQ--TLKGATYV 118

Query: 112 VTGRVIKEG 120
           VTG V + G
Sbjct: 119 VTGDVTEFG 127


>gi|218260783|ref|ZP_03475921.1| hypothetical protein PRABACTJOHN_01585 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224361|gb|EEC97011.1| hypothetical protein PRABACTJOHN_01585 [Parabacteroides johnsonii
           DSM 18315]
          Length = 1315

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 54/147 (36%), Gaps = 26/147 (17%)

Query: 268 NGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFES--- 320
           +G R + +  Q D+  +++ V L     + L      ++     +Y PD   I   +   
Sbjct: 414 DGDRVMFTQTQDDKRWNVFEVKLDGTGFKPLVENDEPDLEFYDGTYLPDGRVIAISNIGY 473

Query: 321 ---------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                    D  G   LY         +R++ D++A++ +PV    G  + +T++     
Sbjct: 474 QGVPCVNGDDAVGNMVLY--NPKDKSMRRLTFDQDANW-NPVIMNNGR-VMYTRWEYTDL 529

Query: 372 AIGV------MKKDGSQERLLVEDSNL 392
                     M  DG++ + L     +
Sbjct: 530 THYYSRIVMHMNPDGTENKALYGSGAM 556


>gi|254391008|ref|ZP_05006217.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294816631|ref|ZP_06775273.1| WD40-like Beta Propeller [Streptomyces clavuligerus ATCC 27064]
 gi|326445545|ref|ZP_08220279.1| WD40 domain-containing protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197704704|gb|EDY50516.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294321446|gb|EFG03581.1| WD40-like Beta Propeller [Streptomyces clavuligerus ATCC 27064]
          Length = 426

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 80/262 (30%), Gaps = 38/262 (14%)

Query: 217 PRFSPNQQKVAY--ATYDDEDILRVYLMDTRIDRAPKRIGNFRSM-----ILAP-RFSSN 268
           P  S   + V +   + D  +    ++   R+  A   +     +      LAP   S++
Sbjct: 128 PAISATGRYVVHEVPSLDPYEQRPGFVRKDRVTGAVDPVAGIDDVKGGFRTLAPKAVSAD 187

Query: 269 GKRALISVQKDE---AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-FESDREG 324
           G++  +S++      +  +   D+++     L + L I+   + + D   +   + DR  
Sbjct: 188 GRQVAVSIRGRGPRPSEAVAVRDMETGVLSVLNSRLLIST-PTLTADGRFLAHMDRDRYS 246

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPV--------WSPQGDLIAFTKF---------- 366
              + + +     + R+ +   A    P          S  G   A              
Sbjct: 247 GPIVSMARMWDRGKDRMIRLDTARDGTPADHRTLDVALSSGGRYAALVSRATNLVPGQDA 306

Query: 367 SGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +G++  + V        + +      E         S  GR ++F     G+     Y  
Sbjct: 307 NGDEQNVFVKNLRTGALQRIDAVGSPETGFTHLGGISGDGRYVLFISY--GEGADDWYVW 364

Query: 422 DLNGRNETLINTPAYASDPQWV 443
           D       L         P + 
Sbjct: 365 DRTSGESVLAYPDTAGGPPSYS 386



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/219 (13%), Positives = 61/219 (27%), Gaps = 23/219 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + L     S + ++VA +           +    ++     + N R +I  P  +
Sbjct: 172 VKGGFRTLAPKAVSADGRQVAVSIRGRGPRPSEAVAVRDMETGVLSVLNSRLLISTPTLT 231

Query: 267 SNGKRALISVQKDEAMDIYSVD--LQSNATERLTNTLFINISAS--------YSPDSSQI 316
           ++G+      +   +  I S+           +      + + +         S      
Sbjct: 232 ADGRFLAHMDRDRYSGPIVSMARMWDRGKDRMIRLDTARDGTPADHRTLDVALSSGGRYA 291

Query: 317 VFES---------DREGKEQ-LYVMQSNGSDQKRISQDKE---ASYFDPVWSPQGDLIAF 363
              S         D  G EQ ++V        +RI                S  G  + F
Sbjct: 292 ALVSRATNLVPGQDANGDEQNVFVKNLRTGALQRIDAVGSPETGFTHLGGISGDGRYVLF 351

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
             +        V  +   +  L   D+    P++S  GR
Sbjct: 352 ISYGEGADDWYVWDRTSGESVLAYPDTAGGPPSYSSPGR 390



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/226 (14%), Positives = 64/226 (28%), Gaps = 28/226 (12%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--------QKDEAMDIYSVDLQSNATE 295
            +     +           P  S+NG+    S           +E  DI+  DL++  TE
Sbjct: 50  IKAPSVIRLTEGANGDSDNPTISANGRYVAFSSHASNLVPDDTNENADIFVRDLRTGRTE 109

Query: 296 RL-TNTLFIN------ISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRIS-- 342
           R+ T+            + + S     +V E       E +               ++  
Sbjct: 110 RVSTDAEGNQLPQGGIGAPAISATGRYVVHEVPSLDPYEQRPGFVRKDRVTGAVDPVAGI 169

Query: 343 ---QDKEASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVEDSNLQAPT 396
              +    +      S  G  +A +          A+ V   +     +L     +  PT
Sbjct: 170 DDVKGGFRTLAPKAVSADGRQVAVSIRGRGPRPSEAVAVRDMETGVLSVLNSRLLISTPT 229

Query: 397 WSPSGRSLIFS-RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            +  GR L    R +       +  +   G++  +    A    P 
Sbjct: 230 LTADGRFLAHMDRDRYSGPIVSMARMWDRGKDRMIRLDTARDGTPA 275


>gi|281356033|ref|ZP_06242526.1| hypothetical protein Vvad_PD2618 [Victivallis vadensis ATCC
           BAA-548]
 gi|281317402|gb|EFB01423.1| hypothetical protein Vvad_PD2618 [Victivallis vadensis ATCC
           BAA-548]
          Length = 370

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 58/213 (27%), Gaps = 19/213 (8%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD-- 233
            + F   +  S      L   + D     ++ P    +   P   P   +V + +  +  
Sbjct: 49  YLWFYCANPPSKAYCLGLLDFESD---RMHVFPETQFLDASPAVKPETGEVWFFSRTELW 105

Query: 234 ---EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                         R+     R  N   +     FS  G    I         +  + L 
Sbjct: 106 KLAPHPEARPEYVNRLPDEIVRGRNPVRVATHITFSPRGDAICIDAGFGRECFLGEMPLD 165

Query: 291 SNATERLTNTLFINISASYSP-DSSQIVFESDR----------EGKEQLYVMQSNGSDQK 339
                      F    A +SP D   I+F  D              ++++ ++ NG    
Sbjct: 166 GGPCNIWERIPFYANHAQFSPVDPDVILFCQDGCNDIVTGESIPYTQRIWTIRRNGKAAA 225

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               ++   +    WS  G  I F  +    F 
Sbjct: 226 FFPGEETPMHGHEWWSADGRYIWFVHYGHGTFK 258



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 61/219 (27%), Gaps = 19/219 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS + + + +   +         +              + +  +P             + 
Sbjct: 43  FSADGRYLWFYCANPPSKAYCLGLLDFESDRMHVFPETQFLDASPAVKPETGEVWFFSRT 102

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISA-------SYSPDSSQIVFESDREGKEQLYVM 331
           +        + +     RL + +    +        ++SP    I  ++    +  L  M
Sbjct: 103 ELWKLAPHPEARPEYVNRLPDEIVRGRNPVRVATHITFSPRGDAICIDAGFGRECFLGEM 162

Query: 332 QSNGSD---QKRISQDKEASYFDPV------WSPQG-DLIAFTKFSGEKFAIGVMKKDGS 381
             +G      +RI      + F PV      +   G + I   +       I  ++++G 
Sbjct: 163 PLDGGPCNIWERIPFYANHAQFSPVDPDVILFCQDGCNDIVTGESIPYTQRIWTIRRNGK 222

Query: 382 QERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                   E        WS  GR + F     G   + L
Sbjct: 223 AAAFFPGEETPMHGHEWWSADGRYIWFVHYGHGTFKADL 261


>gi|148342529|gb|ABQ59044.1| ATG16L1 protein [Homo sapiens]
          Length = 588

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 59/308 (19%), Positives = 108/308 (35%), Gaps = 52/308 (16%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 312 SPGSRLLATG-----GMDR---RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DGAGS 360

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 361 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 402

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 403 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 454

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L V+    +  K+ +  
Sbjct: 455 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFS 508

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 509 APGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAW 566

Query: 398 SPSGRSLI 405
           SPSG  ++
Sbjct: 567 SPSGSHVV 574


>gi|110759973|ref|XP_394888.3| PREDICTED: WD repeat-containing protein 69-like [Apis mellifera]
          Length = 416

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 43/307 (14%), Positives = 101/307 (32%), Gaps = 48/307 (15%)

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                  ++WD+    +++  +            H   + +Y                +S
Sbjct: 110 GSYDRTCKVWDIDSGTELLTLE-----------GHK--NVVYTVSFNNP---------IS 147

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           + +V+G    +  +      +        +  +   +FSP   K+A  + D        +
Sbjct: 148 DKIVTGSFDKTAKIWCSRTGHCTTTMRGHNAEVVVAKFSPIYTKIATGSLDMTSR----I 203

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LT 298
            D         +    + I+A  F+++G +  I+   D  + I+     +    R   L 
Sbjct: 204 FDITTGEELGILRGHTAEIIALHFNNDGNQI-ITGSFDGTVSIW----DTRILTRVCVLI 258

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQ 357
                  +  Y+ D S I   S  +   +++  + N      ++    +    D  +   
Sbjct: 259 GHRSELSNCIYNFDCSLIA-SSSMDKTAKVWDTKMNSC---LVTFRGHDDEVLDLTFDNN 314

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDT 414
           G  +A            V     + ++L +   + +  +   +SP+ + L+ S     D 
Sbjct: 315 GKKLATASSDTTA---RVWDVSTNFKQLALMKGHREEVSKVCFSPNSQHLLTSSL---DR 368

Query: 415 GSKLYSI 421
            SKL+S+
Sbjct: 369 TSKLWSL 375


>gi|181630|gb|AAA35769.1| DNF1552 protein [Homo sapiens]
          Length = 606

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 17/146 (11%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY- 231
           +   +            +++L  +D  G     L+      +  PR SP+Q ++ Y  Y 
Sbjct: 159 WAGGMSLPVGIRFCTNRRSALYYVDLIGGKCELLSDD-SLAVSSPRLSPDQCRIVYLQYP 217

Query: 232 -----DDEDILRVYLMDTRIDRA-----PKRIGNFRSMILAP-----RFSSNGKRALISV 276
                     L +Y   T++        P+++G   S I         +S++ +R +   
Sbjct: 218 SLIPHHQCSQLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDS 277

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLF 302
            +    D+++VD Q      LT    
Sbjct: 278 AQRTRQDLFAVDTQVGTVTSLTAGGS 303



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/150 (12%), Positives = 49/150 (32%), Gaps = 19/150 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---- 274
           ++          +       +Y +D    +  + + +    + +PR S +  R +     
Sbjct: 159 WAGGMSLPVGIRFCTNRRSALYYVDLIGGKC-ELLSDDSLAVSSPRLSPDQCRIVYLQYP 217

Query: 275 SVQKDEA-MDIYSVDLQSNA--------TERLT-NTLFINIS----ASYSPDSSQIVFES 320
           S+        +   D  +            +L  N   I  S      +S DS ++VF+S
Sbjct: 218 SLIPHHQCSQLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDS 277

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYF 350
            +  ++ L+ + +       ++       +
Sbjct: 278 AQRTRQDLFAVDTQVGTVTSLTAGGSGGSW 307


>gi|62857487|ref|NP_001017193.1| intraflagellar transport 80 homolog [Xenopus (Silurana) tropicalis]
 gi|89269965|emb|CAJ81283.1| WD repeat domain 56 [Xenopus (Silurana) tropicalis]
 gi|116284108|gb|AAI23979.1| intraflagellar transport 80 homolog [Xenopus (Silurana) tropicalis]
          Length = 779

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/261 (14%), Positives = 84/261 (32%), Gaps = 39/261 (14%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DG--------ANIRYLT 207
            +SDD Y               F          +  + V+   DG          +    
Sbjct: 52  KLSDDTYPIDLH---------WFPKNVGNRKQAQAEMFVLTSSDGKFHLISKLGRLEKSV 102

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
            +    +   R++ +    A  T  ++  ++++   ++       +    S + +  +  
Sbjct: 103 EAHSGAVLAGRWNYDGT--ALVTVGEDGHVKIW---SKSGMLRSTLAQNGSPVYSVAWGP 157

Query: 268 NGKRALISVQKDEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           + ++ L  +       +    LQ S+   +      I +S  ++  +  I+      G++
Sbjct: 158 DSEKVLYPL----GKQLIIKPLQPSSKVLQWKAHDGIILSVDWNSVNDLIL----SAGED 209

Query: 327 QLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            +Y +   NG +    S   E       W+P G+L A   F      + +  K G    L
Sbjct: 210 CIYKIWDRNGRNLYN-SASHEYPITSVSWAPDGELFAVGSF----HTLRLCDKTGWSYAL 264

Query: 386 -LVEDSNLQAPTWSPSGRSLI 405
                 ++ +  WS  G  + 
Sbjct: 265 EKPNTGSIFSIAWSVDGTQIA 285



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 46/273 (16%), Positives = 89/273 (32%), Gaps = 40/273 (14%)

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLW--DVKDRKQIIGKKFFSSPASWRKIAHTISD 160
           WN L  +  V   V+K   D   ++   +  +V +RKQ   + F  + +  +   H IS 
Sbjct: 40  WNLLTNETTV---VVKLSDDTYPIDLHWFPKNVGNRKQAQAEMFVLTSSDGKF--HLIS- 93

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNS---LCVMDRDGAN--------IRYLTPS 209
                   + G     +   S +V++G        L  +  DG          +R     
Sbjct: 94  --------KLGRLEKSVEAHSGAVLAGRWNYDGTALVTVGEDGHVKIWSKSGMLRSTLAQ 145

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               ++   + P+ +KV Y         ++ +   +      +      +IL+  ++S  
Sbjct: 146 NGSPVYSVAWGPDSEKVLYPL-----GKQLIIKPLQPSSKVLQWKAHDGIILSVDWNS-V 199

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              ++S  +D    I+  D          +  +   S S++PD           G     
Sbjct: 200 NDLILSAGEDCIYKIW--DRNGRNLYNSASHEYPITSVSWAPDGELFAV-----GSFHTL 252

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +         + +    S F   WS  G  IA
Sbjct: 253 RLCDKTGWSYALEKPNTGSIFSIAWSVDGTQIA 285


>gi|331248088|ref|XP_003336669.1| pre-mRNA splicing factor [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309315659|gb|EFP92250.1| pre-mRNA splicing factor [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 618

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 75/242 (30%), Gaps = 29/242 (11%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  L  +  DG  +R       + + +  FS + ++   A YD     ++ L +T     
Sbjct: 352 RVKLWDVYHDGKCLRTFM-GHSKAVRDVTFSNDGKQFLSAGYDR----QIKLWNTETGHC 406

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISAS 308
            +   N + +    +   +  +  I +       I   D++S    +     L    + +
Sbjct: 407 VQAFSNGK-IPYCVKLHPDNDKQHIFLAGMSDKKIVQYDMRSGEITQEYDQHLGPVNTIT 465

Query: 309 YSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +  ++ + V  SD    R     + V+       K I++    S       P    +A  
Sbjct: 466 FVDENRRFVTTSDDKTIRAWDFDIPVV------IKYIAEPAMHSMPAVSLHPNNKWLAMQ 519

Query: 365 KFSGEKFAIGVMKKDG----SQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                   + +   D      ++R              +SP G+   F    DG      
Sbjct: 520 SLDN---QVLIYSADSFKQNRKKRFAGHTIAGYACEVGFSPDGK---FLSSGDGSGSMVF 573

Query: 419 YS 420
           + 
Sbjct: 574 WD 575


>gi|254427235|ref|ZP_05040942.1| Tat pathway signal sequence domain protein [Alcanivorax sp. DG881]
 gi|196193404|gb|EDX88363.1| Tat pathway signal sequence domain protein [Alcanivorax sp. DG881]
          Length = 408

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 46/133 (34%), Gaps = 14/133 (10%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           L++   E+L  +   N          QI F +  +G  +++ + +N +    +     A+
Sbjct: 254 LETPTREQLPQSTAFNGGEGIWYSQGQIYFTT--KGDNRVWQLDTNLNQLSVLYDAATAA 311

Query: 349 ------YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA----PTWS 398
                   +   S  GD        G    I V+   G    LL       +    P +S
Sbjct: 312 NPLLTGVDNLTVSSGGD--VLVAEDGGDMQIVVIDAQGDVAPLLQVTGQDDSEITGPAFS 369

Query: 399 PSGRSLIFSRKKD 411
           P G  L FS ++ 
Sbjct: 370 PDGNRLYFSSQRG 382


>gi|189195658|ref|XP_001934167.1| WD repeat containing protein 61 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187980046|gb|EDU46672.1| WD repeat containing protein 61 [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 332

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 62/198 (31%), Gaps = 26/198 (13%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY----- 309
           N    I A   S++G+    S   +  ++++S++                   S+     
Sbjct: 123 NKPGEIWAIALSADGQYLA-STSINGKINVWSLNKDEGMPR----IREYETKGSFGMCVD 177

Query: 310 -SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S + S   F +       +YV  +                    +SP   L+A     G
Sbjct: 178 LSRNGS---FTASGHENGSIYVFNNETGRLAHSLAGLVHPVRSVAFSPASKLLA---AGG 231

Query: 369 EKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +   I +      ++          + +  WS +G  L+       D+ +K++ I     
Sbjct: 232 DARIIALYDVTSGEQVANFTGHGGWVLSLDWSDTGEYLLSGSH---DSKAKVWRI----E 284

Query: 427 NETLINTPAYASDPQWVG 444
             T + T ++   P W  
Sbjct: 285 TRTCVATHSHGDKPLWSA 302


>gi|72160889|ref|YP_288546.1| peptidase [Thermobifida fusca YX]
 gi|71914621|gb|AAZ54523.1| putative peptidase [Thermobifida fusca YX]
          Length = 711

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/223 (17%), Positives = 69/223 (30%), Gaps = 55/223 (24%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMD---IYSVDLQSNAT----ERLTNTLFINISA--- 307
            +  + + S +G+R      +D       ++  +           R       ++     
Sbjct: 16  GVPRSFQISPDGQRVAFLRSRDGTDTATCLWVAEPDGTERIIADPRTIGDTGEDLPPEER 75

Query: 308 --------------SYSPDS--SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                         SYS D   ++ VF        +LY ++ +GS   R          D
Sbjct: 76  ARRERLRESGSGIVSYSVDKAFTRAVFSL----SGRLYSVELDGSGTPRELPAAS-PAID 130

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED------------------SNLQ 393
           PV  P G L+A+      K AI V+      +R++                        +
Sbjct: 131 PVLDPTGRLVAYVH----KGAIHVLDLADGLDRVVAAPDGKNITWGLAEFIAAEEMGRHR 186

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
              WSP G  L+    +   T  + + I   G  E +  T AY
Sbjct: 187 GMWWSPDGTFLL--ATRVDTTPVRRWHISDPGNPEAVPQTVAY 227


>gi|319784464|ref|YP_004143940.1| SMP-30/gluconolaconase/LRE-like region-containing protein
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317170352|gb|ADV13890.1| SMP-30/Gluconolaconase/LRE-like region-containing protein
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 287

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 67/186 (36%), Gaps = 27/186 (14%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +PR+  +G+   + +      +I +VD   N    LT    +  S  + PD   +V  S 
Sbjct: 21  SPRWH-DGR---LWLCNWGTGEIIAVDADGNREVMLTVPAVLPYSIDWLPDGRLLV-ISG 75

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF------SGEKFA--- 372
           REG   L   +++GS   R      +          G    +         SGE F+   
Sbjct: 76  REG--LLLRQEADGSLVTRADLRDLSKSPWNEIVVDGRGNTYVNGGGPAPASGEHFSPGT 133

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK-----------DGDTGSKLYSI 421
           I ++  DG+  ++    +       SP  ++LI +              DG   ++    
Sbjct: 134 IVLITPDGAVRQVAENIAFANGMAVSPDNKTLIVAESHANRLTAFDIAADGSLANRRVWA 193

Query: 422 DLNGRN 427
           DL+G  
Sbjct: 194 DLDGYP 199


>gi|193069074|ref|ZP_03050032.1| peptidase, S54 (rhomboid) family [Escherichia coli E110019]
 gi|192957618|gb|EDV88063.1| peptidase, S54 (rhomboid) family [Escherichia coli E110019]
          Length = 625

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T       F    S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSFI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+        +I  ++  ++  E            +  +
Sbjct: 440 TGTSGKPGAWVMALSPDERTLLVPGA--GRGNIVRINTITHQKEDFPAGDARGTISAMRF 497

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ V     S   +      + Y     SP G  +A   +  +
Sbjct: 498 RPENGEVIFA-DSQGISRISVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 554

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 555 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 603

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 604 SLDPQAIIRHPQYG 617


>gi|169618096|ref|XP_001802462.1| hypothetical protein SNOG_12236 [Phaeosphaeria nodorum SN15]
 gi|111059528|gb|EAT80648.1| hypothetical protein SNOG_12236 [Phaeosphaeria nodorum SN15]
          Length = 714

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 66/183 (36%), Gaps = 17/183 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++  S   + ++ ++  +G+    +T  ++  + +  +SPN ++             +
Sbjct: 242 VDKTNKSYYGETNMYILSANGSFDSRITLDKEGPIHDVSWSPNSKEFGVVYGYMPAKTTI 301

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     +  L PR    FS +G+  L++   + A D+   DL+ N  +
Sbjct: 302 FN---------ARAVPQHNFDLGPRNTILFSPHGRYVLVAGFGNLAGDMDIYDLEKNYHK 352

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             T          +SPD   I     S R   +    +   G   + +  ++    +   
Sbjct: 353 LCTIKASNCTYCEWSPDGKHILSAITSPRLRVDNGIRIYHIGG--QLMYNEEMTEMYHVT 410

Query: 354 WSP 356
           W P
Sbjct: 411 WRP 413



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 48/134 (35%), Gaps = 12/134 (8%)

Query: 277 QKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSN 334
                 ++Y +    +   R+T +        S+SP+S +  V       K  ++     
Sbjct: 248 SYYGETNMYILSANGSFDSRITLDKEGPIHDVSWSPNSKEFGVVYGYMPAKTTIF----- 302

Query: 335 GSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSN 391
             + + + Q           ++SP G  +    F      + +   + +  +L  ++ SN
Sbjct: 303 --NARAVPQHNFDLGPRNTILFSPHGRYVLVAGFGNLAGDMDIYDLEKNYHKLCTIKASN 360

Query: 392 LQAPTWSPSGRSLI 405
                WSP G+ ++
Sbjct: 361 CTYCEWSPDGKHIL 374



 Score = 40.4 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 61/178 (34%), Gaps = 28/178 (15%)

Query: 264 RFSSNGKR--ALISVQKDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             S       A+   ++        ++ V   ++A  + T      +   ++   + ++ 
Sbjct: 177 AVSPGNTHSVAVFVPERKGMPAAVKVFQVPQFNSAISQKTFYKGDKVQLKWNDLGTSLIV 236

Query: 319 ESDRE---------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +  E         G+  +Y++ +NGS   RI+ DKE    D  WSP             
Sbjct: 237 LAQTEVDKTNKSYYGETNMYILSANGSFDSRITLDKEGPIHDVSWSPNSKEFGVV----- 291

Query: 370 KFAIGVMKKDGS--QERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSI 421
               G M    +    R + + +    P     +SP GR ++ +   +      +Y +
Sbjct: 292 ---YGYMPAKTTIFNARAVPQHNFDLGPRNTILFSPHGRYVLVAGFGNLAGDMDIYDL 346


>gi|326530105|dbj|BAK08332.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 899

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 77/220 (35%), Gaps = 13/220 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G       +   D  N +        ++ + RFSP+  ++A +++D    +RV+  D  
Sbjct: 629 TGGHDKKAVLWFTDALNPKSTLEEHSMLITDVRFSPSMTRLATSSFD--KTVRVWDAD-N 685

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLFI 303
            D + +      + + +  F SN +  + S   D  +  +S++   +     R+ N    
Sbjct: 686 PDYSLRTFTGHSASVKSLDFHSNKEDIICSCDSDGEVRCWSIN-NGSCVTCVRVFNGGAT 744

Query: 304 NISASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLI 361
            +   Y P     +   S+    + + ++ +      +   Q    +     W   GD +
Sbjct: 745 QLQLRYQPRQGKYLAAASE----KMISILDAETLQVCRNALQGHIKNIQSICWDAAGDYL 800

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPS 400
           A       K        DG +   L    N   +  + P+
Sbjct: 801 ASVSEDSVKVWSFTSGNDGDRVNELNCSGNKFNSCVFHPN 840


>gi|297830446|ref|XP_002883105.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328945|gb|EFH59364.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 609

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/240 (14%), Positives = 84/240 (35%), Gaps = 16/240 (6%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-------SRDQILFEPRFSPNQQK 225
           F+  +  VS   V     + +     DG   +++          R Q      F+ ++++
Sbjct: 320 FSGHMKNVSSLAVLKGAADYILSGSYDGLICKWMLGRGFCGKLHRTQNSQIKCFAAHEEE 379

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +  + YD++     Y  D   +     IGN    +     S +    L+   +       
Sbjct: 380 IVTSGYDNKISRISYKDDQCTNEESVDIGNQPKDLSLAPLSPD---LLLVTFESG----- 431

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
            V L+        +  F   + + +PD ++      ++GK  LY +  +   ++ + +  
Sbjct: 432 VVFLRDGKVVSTIDLGFTVTALAVTPDGTE-AIIGGQDGKLHLYSVNGDSLTEEAVLEKH 490

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +     +SP   + A    + E      + ++   + +L   + +    WSP+   + 
Sbjct: 491 RGAISVIRYSPDLSMFASGDLNREAVVWDRVSREMKLKNMLYHSARINCLAWSPNSTMVA 550



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 6/104 (5%)

Query: 198 RDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDT-RIDRAPKRIG 254
            +G   ++   SR+   F    RF+P+  K    + D + I  +Y   T  I        
Sbjct: 172 YEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGI--IYDGKTCEILGELSSDD 229

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
             +  I A  +S +G++ L +V  D++  ++ +    + T + T
Sbjct: 230 GHKGSIYAVSWSPDGQQVL-TVSADKSAKVWDISDNGSGTLKTT 272



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 38/258 (14%), Positives = 73/258 (28%), Gaps = 65/258 (25%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSN 292
           +   V  +D          G         R+S NG+    S      + I+    D    
Sbjct: 34  NGRSVVTLDLNNPLKVSIYGEHAYPATVARYSPNGEWIA-SGDVSGTVRIWGAYNDHVLK 92

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD--------QKRI--- 341
              ++      ++   +S D  +IV   D +GK  +     +            +R+   
Sbjct: 93  KEFKVLAGRIDDLQ--WSADGMRIVASGDGKGKSLVRAFMWDSGSNVGEFDGHSRRVLSC 150

Query: 342 --------------------------------SQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                                           S++         ++P G          +
Sbjct: 151 AIKPTRPFRIVTCGEDFLVNFYEGPPFKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKK 210

Query: 370 KFAIGVMKKDGSQERLLVE-------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    DG    +L E         ++ A +WSP G+ ++       D  +K++ I 
Sbjct: 211 GIIY-----DGKTCEILGELSSDDGHKGSIYAVSWSPDGQQVL---TVSADKSAKVWDIS 262

Query: 423 LNGRN--ETLINTPAYAS 438
            NG    +T +N P  + 
Sbjct: 263 DNGSGTLKTTLNCPGSSG 280


>gi|168702449|ref|ZP_02734726.1| NB-ARC domain protein [Gemmata obscuriglobus UQM 2246]
          Length = 403

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 49/154 (31%), Gaps = 8/154 (5%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSP 311
           +    S + A   + +G+   IS   D  + ++  D  +      L        SA  +P
Sbjct: 106 LSGHTSAVAAVAVTPDGRTL-ISAGNDRTVRLW--DASTGKPLRVLEGHTAWVGSAVVTP 162

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D S+ V      G   + +       +        A+      +  G  +          
Sbjct: 163 DGSKAV---TAGGDSTIRIWDLKTGKELAKLNGHAAAVRGLALTADGKTLISGSSDKTCR 219

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           A  ++      ++     +++++   +P G  ++
Sbjct: 220 AWDLVACQ-EVKQYGAAKASVESVAVAPDGTHVL 252



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 5/104 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    ++CV D              + ++    SP+ ++VA A+YD      V + D 
Sbjct: 295 VSGARDKTVCVWDVASGRELKRLEGHKEHVYHVALSPDGKRVASASYDR----TVRIWDL 350

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
              R  KR    +  +    F+ +G R + S   D+ +  + V 
Sbjct: 351 ASGRELKRFEGHKDGVQGVCFTRDG-RFVFSASWDKTVRRWRVP 393



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 77/257 (29%), Gaps = 37/257 (14%)

Query: 113 TGRVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTI-------- 158
            G  +        V        R+WD+K  K++         A+ R +A T         
Sbjct: 155 VGSAVVTPDGSKAVTAGGDSTIRIWDLKTGKELAKLN--GHAAAVRGLALTADGKTLISG 212

Query: 159 -------------SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIR 204
                          ++ Q    +    +  +      V++G    ++ V D + G  + 
Sbjct: 213 SSDKTCRAWDLVACQEVKQYGAAKASVESVAVAPDGTHVLAGSGLGAVTVYDAQTGDVVG 272

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
                    +     + + +       D      V + D    R  KR+   +  +    
Sbjct: 273 GFDKHNGTAVNTIAVTADGEAAVSGARDK----TVCVWDVASGRELKRLEGHKEHVYHVA 328

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +GKR   S   D  + I+ +       +R            ++ D  + VF +  + 
Sbjct: 329 LSPDGKRVA-SASYDRTVRIWDL-ASGRELKRFEGHKDGVQGVCFTRDG-RFVFSASWDK 385

Query: 325 KEQLYVMQSNGSDQKRI 341
             + + +    +  K++
Sbjct: 386 TVRRWRVPPGEAGSKKV 402



 Score = 43.1 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 27/246 (10%), Positives = 77/246 (31%), Gaps = 15/246 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D        +       +     +P+  K             + + D +
Sbjct: 127 SAGNDRTVRLWDASTGKPLRVLEGHTAWVGSAVVTPDGSKAV----TAGGDSTIRIWDLK 182

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +   ++    + +     +++GK   IS   D+    + + +     ++         
Sbjct: 183 TGKELAKLNGHAAAVRGLALTADGKTL-ISGSSDKTCRAWDL-VACQEVKQYGAAKASVE 240

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFT 364
           S + +PD + ++  S   G   + V  +   D      +    +      +  G+  A +
Sbjct: 241 SVAVAPDGTHVLAGS---GLGAVTVYDAQTGDVVGGFDKHNGTAVNTIAVTADGEA-AVS 296

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               +   +  +      +RL     ++     SP G+ +  +     D   +++ +  +
Sbjct: 297 GARDKTVCVWDVASGRELKRLEGHKEHVYHVALSPDGKRVASASY---DRTVRIWDL-AS 352

Query: 425 GRNETL 430
           GR    
Sbjct: 353 GRELKR 358



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 44/303 (14%), Positives = 88/303 (29%), Gaps = 49/303 (16%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR +    +   V  RLWD    K +   +            HT    +  ++    G  
Sbjct: 122 GRTLISAGNDRTV--RLWDASTGKPLRVLE-----------GHTA--WVGSAVVTPDG-- 164

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
                      V+    +++ + D                +     + + + +   + D 
Sbjct: 165 --------SKAVTAGGDSTIRIWDLKTGKELAKLNGHAAAVRGLALTADGKTLISGSSDK 216

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
                    D    +  K+ G  ++ + +   + +G      +       +   D Q+  
Sbjct: 217 ----TCRAWDLVACQEVKQYGAAKASVESVAVAPDGTHV---LAGSGLGAVTVYDAQTGD 269

Query: 294 T-----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                 +   N   +N  A  + D    V  S    K       ++G + KR+   KE  
Sbjct: 270 VVGGFDKH--NGTAVNTIAV-TADGEAAV--SGARDKTVCVWDVASGRELKRLEGHKEHV 324

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL--QAPTWSPSGRSLIF 406
           Y     SP G  +A   +      + +      +E    E      Q   ++  GR + F
Sbjct: 325 YHV-ALSPDGKRVASASYDRT---VRIWDLASGRELKRFEGHKDGVQGVCFTRDGRFV-F 379

Query: 407 SRK 409
           S  
Sbjct: 380 SAS 382


>gi|156841188|ref|XP_001643969.1| hypothetical protein Kpol_1001p23 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114600|gb|EDO16111.1| hypothetical protein Kpol_1001p23 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 610

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 46/285 (16%), Positives = 101/285 (35%), Gaps = 34/285 (11%)

Query: 163 YQSITGEKGDFNSRIL-----FVSES-VVSGIIKNSLCVMDRDGANIRY--LTPSRDQIL 214
           Y+++      ++S IL     F+S +   SG    ++  ++  G N     L       +
Sbjct: 25  YENVKVTNNAWDSNILKTNGKFISVNWKSSGGGAFAVIPVEEVGKNPDQVPLFRGHTAQV 84

Query: 215 FEPRFSP----------NQQKVAYATYDDEDILRVYL---MDTRIDRAPKRIGNFRSMIL 261
            +  F P          +  K+A     +      YL      +     K +   +  + 
Sbjct: 85  LDTEFDPFNERRIVSCADDSKIAVWDIPENYSFHHYLDEDNQPKDISPVKILTGHKKKVG 144

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S   +  L S   D  + I+  ++++   E       +  S S+S D + +   S 
Sbjct: 145 HVLYSPVAQNILASSSLDYTVKIW--NVETGKDEITLKHPDMVTSMSFSYDGNHLATVS- 201

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA---FTKFSGEKFAIG---- 374
           R+ K +++ ++      +  +     +    VW    + +A   F++ S  +  I     
Sbjct: 202 RDKKLRVWDVRKGTVVSEGAAHTGAKNQRV-VWLGNCNRLATTGFSRLSDRQIGIWDAFN 260

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           + K D      + + S +  P +   G  +++   K GD   + Y
Sbjct: 261 LEKGDLGGFYTVDQSSGILMPFFD-DGNKILYLAGK-GDGNIRYY 303


>gi|261328367|emb|CBH11344.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 527

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 49/144 (34%), Gaps = 19/144 (13%)

Query: 274 ISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFE--SDRE------- 323
              Q    + IY + +L   A  + T     + +  +S   + +     S+R+       
Sbjct: 221 FHKQTQGTLFIYRLPNLGDGAMFQATFGRAESATLLWSGSGNHLAVLVKSERDASGKSYY 280

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G   LY++   G   K+I      S  D  WSP  D +             +  K G   
Sbjct: 281 GTVLLYLVDVGGRKIKQIKFPSGESVHDCQWSPTVDELMVVHGKMPVNKTTLYDKAGVAL 340

Query: 384 RLLVEDSNLQAPT----WSPSGRS 403
                 +  +AP     WSP+GR 
Sbjct: 341 M-----TFGEAPRNVILWSPNGRF 359


>gi|260853907|ref|YP_003227798.1| rhomboid family protein [Escherichia coli O26:H11 str. 11368]
 gi|257752556|dbj|BAI24058.1| rhomboid family protein [Escherichia coli O26:H11 str. 11368]
          Length = 625

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T       F    S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSFI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+        +I  ++  ++  E            +  +
Sbjct: 440 TGTSGKPGAWVMALSPDERTLLVPGA--GRGNIVRINTITHQKEDFPAGDARGTISAMRF 497

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ V     S   +      + Y     SP G  +A   +  +
Sbjct: 498 RPENGEVIFA-DSQGISRISVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 554

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 555 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 603

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 604 SLDPQAIIRHPQYG 617


>gi|182413640|ref|YP_001818706.1| hypothetical protein Oter_1823 [Opitutus terrae PB90-1]
 gi|177840854|gb|ACB75106.1| hypothetical protein Oter_1823 [Opitutus terrae PB90-1]
          Length = 761

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 17/170 (10%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +        A +FS +G+R + S   D     Y +   +    +   T F     S+   
Sbjct: 564 VSVEDKNTHAVQFSPDGRRLIFSRYPDRTS--YEMRRGTEGWSQPAPTRFTGKEVSFDAT 621

Query: 313 SSQIVFESDREGKEQLYVMQSNG-SDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGE 369
               +F  DR G          G S+   +  + +   + + P  + +G+L        +
Sbjct: 622 -KHRLFYYDRGGDLFWVRYDDAGFSEPTPLGPTINTRETEYYPSITARGNLYFSRNARWD 680

Query: 370 KFAIGVMKKDGSQERLLVEDS----------NLQAP-TWSPSGRSLIFSR 408
           +  + V    G    + V+               AP T SP G+ L F+R
Sbjct: 681 QGRLMVAAPAGDGFNVPVDLGERVNAGGASHGFVAPDTVSPDGKYLFFTR 730



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 68/231 (29%), Gaps = 31/231 (13%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANI---------RYLTPSRDQILFEPRFSPNQQK 225
           +R +  + +  +   +    V D  G +          R      D+     +FSP+ ++
Sbjct: 523 TRAVLSAPATDAMAKRADSFVCDYLGESPPSDEPVVFGRGTVSVEDKNTHAVQFSPDGRR 582

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           + ++ Y D     +        +       F    ++  F +   R     +  +   + 
Sbjct: 583 LIFSRYPDRTSYEMRRGTEGWSQPA--PTRFTGKEVS--FDATKHRLFYYDRGGDLFWVR 638

Query: 286 SVDLQSNATERL---TNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSD---- 337
             D   +    L    NT       S +   + + F  + R  + +L V    G      
Sbjct: 639 YDDAGFSEPTPLGPTINTRETEYYPSITARGN-LYFSRNARWDQGRLMVAAPAGDGFNVP 697

Query: 338 ---QKRISQDK--EASYFDPVWSPQGDLIAFTK----FSGEKFAIGVMKKD 379
               +R++              SP G  + FT+      G  F   V    
Sbjct: 698 VDLGERVNAGGASHGFVAPDTVSPDGKYLFFTRLPLERGGAGFVYWVATAS 748


>gi|72389440|ref|XP_845015.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|62176698|gb|AAX70798.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70801549|gb|AAZ11456.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 527

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 49/144 (34%), Gaps = 19/144 (13%)

Query: 274 ISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFE--SDRE------- 323
              Q    + IY + +L   A  + T     + +  +S   + +     S+R+       
Sbjct: 221 FHKQTQGTLFIYRLPNLGDGAMFQATFGRAESATLLWSGSGNHLAVLVKSERDASGKSYY 280

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G   LY++   G   K+I      S  D  WSP  D +             +  K G   
Sbjct: 281 GTVLLYLVDVGGRKIKQIKFPSGESVHDCQWSPTVDELMVVHGKMPVNKTTLYDKAGVAL 340

Query: 384 RLLVEDSNLQAPT----WSPSGRS 403
                 +  +AP     WSP+GR 
Sbjct: 341 M-----TFGEAPRNVILWSPNGRF 359


>gi|34540319|ref|NP_904798.1| dipeptidyl aminopeptidase IV [Porphyromonas gingivalis W83]
 gi|3135201|dbj|BAA28265.1| DPP IV [Porphyromonas gingivalis]
 gi|34396631|gb|AAQ65697.1| dipeptidyl aminopeptidase IV [Porphyromonas gingivalis W83]
          Length = 723

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 86/319 (26%), Gaps = 60/319 (18%)

Query: 188 IIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---EDILRVYLMD 243
                  V D D   N+          +  P FSP+ + VA+   ++   +       + 
Sbjct: 115 RHSYRAAVYDYDVRRNLVKPLSEHVGKVMIPTFSPDGRMVAFVRDNNIFIKKFDFDTEVQ 174

Query: 244 TRIDRAPKRIGNFR---------SMILAPRFSSNGKRALISVQKDEAMDIYSVDL----- 289
              D     I N            +     +S++          + A+  Y + +     
Sbjct: 175 VTTDGQINSILNGATDWVYEEEFGVTNLMSWSADNAFLAFVRSDESAVPEYRMPMYEDKL 234

Query: 290 ---------------QSNATERLTNTLFINI---SASYSPDS--SQIVFESDRE------ 323
                           S  +  L N    N    S     D    +I F  + +      
Sbjct: 235 YPEDYTYKYPKAGEKNSTVSLHLYNVADRNTKSVSLPIDADGYIPRIAFTDNADELAVMT 294

Query: 324 -----GKEQLYVMQSNGSDQKRISQDKEASYFDPVW------SPQGDLIAFTKFSGEKFA 372
                   ++Y +       K I QD    Y D  W      +  G   A+         
Sbjct: 295 LNRLQNDFKMYYVHPKSLVPKLILQDMNKRYVDSDWIQTLKFTTGGGF-AYVSEKDGFAH 353

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYSIDLNGRNETL- 430
           I +    G   R +   +      +      ++ +   ++      +Y+ID  GR   L 
Sbjct: 354 IYLYDNKGVMHRRITSGNWDVTKLYGVDASGTVFYQSAEESPIRRAVYAIDAKGRKTKLS 413

Query: 431 --INTPAYASDPQWVGFMD 447
             + T        +  +++
Sbjct: 414 LNVGTNDALFSGNYAYYIN 432



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 80/271 (29%), Gaps = 75/271 (27%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           Y       VY  D R +   K +      ++ P FS +G+       +D  + I   D  
Sbjct: 114 YRHSYRAAVYDYDVRRN-LVKPLSEHVGKVMIPTFSPDGRMVAFV--RDNNIFIKKFDFD 170

Query: 291 SNATERLTNTLFINI------------------SASYSPDSSQIVFE-SDREGKEQ---- 327
           +    ++T    IN                     S+S D++ + F  SD     +    
Sbjct: 171 T--EVQVTTDGQINSILNGATDWVYEEEFGVTNLMSWSADNAFLAFVRSDESAVPEYRMP 228

Query: 328 --------------------------LYVMQSNGSDQKRISQDKEASYFDP--VWSPQGD 359
                                     L++      + K +S   +A  + P   ++   D
Sbjct: 229 MYEDKLYPEDYTYKYPKAGEKNSTVSLHLYNVADRNTKSVSLPIDADGYIPRIAFTDNAD 288

Query: 360 LIAFTKFS--GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL-----------IF 406
            +A    +     F +  +       +L+++D N +          +            +
Sbjct: 289 ELAVMTLNRLQNDFKMYYVHPKSLVPKLILQDMNKRYV----DSDWIQTLKFTTGGGFAY 344

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             +KDG   + +Y  D  G     I +  + 
Sbjct: 345 VSEKDG--FAHIYLYDNKGVMHRRITSGNWD 373


>gi|148257536|ref|YP_001242121.1| hypothetical protein BBta_6297 [Bradyrhizobium sp. BTAi1]
 gi|146409709|gb|ABQ38215.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 367

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 72/235 (30%), Gaps = 25/235 (10%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKR-----IGNFRSMILAP-RFSSNGKRALISVQ 277
           +  AY    D + + V+  D              +G  +     P   S + K  LI+  
Sbjct: 28  ETYAYVGNADSNDISVFKFDAMTGEMVPVQTAAFVGVEKPGSSTPLAVSPD-KTVLIAGV 86

Query: 278 K--DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +      + +++D ++     L N    +  A+ + D +  V  S   G  ++ V     
Sbjct: 87  RAQPYLAESFAIDAKTGQLSHLGNGPLADSMANIAFDRTGKVLFSASYGGNKVAVNPVQA 146

Query: 336 SDQ-----KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER----LL 386
           S       + I     A  F P  SP    +  T    ++                  L 
Sbjct: 147 SGVVAAPSQVIPTGLNAHAFLP--SPDNRFVFATNLGSDQVLGFAFDAATGTLTAKEALT 204

Query: 387 VEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSID--LNGRNETLINTPAY 436
           V       P    + P+G+ +    + + D     Y  D  L    + L   PA 
Sbjct: 205 VRTPEKSGPRHFIFHPNGKFIYLLHELNADLAVYGYDADKGLWSEQQRLSTLPAG 259



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 86/280 (30%), Gaps = 21/280 (7%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
              +  + + F     +  +++H  +  +  S+     D   ++LF +    + +  N +
Sbjct: 86  VRAQPYLAESFAIDAKTG-QLSHLGNGPLADSMANIAFDRTGKVLFSASYGGNKVAVNPV 144

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR- 252
                  A  + +    +   F P  SP+  +  +AT    D +  +  D        + 
Sbjct: 145 QASGVVAAPSQVIPTGLNAHAFLP--SPD-NRFVFATNLGSDQVLGFAFDAATGTLTAKE 201

Query: 253 -IGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSN---ATERLTNTLFINI 305
            +         PR   F  NGK   +  + +  + +Y  D         +RL+       
Sbjct: 202 ALTVRTPEKSGPRHFIFHPNGKFIYLLHELNADLAVYGYDADKGLWSEQQRLSTLPAGFT 261

Query: 306 SASYS------PDSSQIVFESDREGKE-QLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQ 357
              ++      PD  Q ++ S+R       + + +       I S   E         P 
Sbjct: 262 GKPWAADLHLTPDG-QFLYASERGSNTLAAFKVDAASGRLTSIGSVPTETQPRGFAIDPG 320

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           G  +A          +  +         +   +  + P W
Sbjct: 321 GRYLAAVGEVSNGMTVYRIDAASGALEKIKSYAVGKKPNW 360


>gi|134114035|ref|XP_774265.1| hypothetical protein CNBG2460 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256900|gb|EAL19618.1| hypothetical protein CNBG2460 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 615

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 85/271 (31%), Gaps = 36/271 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  L  +  +G N         Q + +  F+ +  K   A+YD      + L DT   +
Sbjct: 347 TKVKLWDVYNEG-NCLRTFLGHSQAVKDIAFNNSGDKFLSASYDK----HIKLWDTETGK 401

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINIS 306
             +   N +   +  +F+ +G +  I +   +   I   DL+     + T    L    +
Sbjct: 402 CIQAFTNGKIPNV-VKFNPDGDKQNIFMAGMQDKKIIQYDLREREIVQ-TYDQHLGPVNT 459

Query: 307 ASYSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            ++  ++ + V  SD    R     + V+       K I++    S       P     A
Sbjct: 460 ITFVDENRRFVTTSDDKTIRGWDYDIPVV------IKYIAEPYMHSMPAVTLHPSKRYFA 513

Query: 363 FTKFSGEKFAIGVMKKDGSQERLL-------VEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                     I V   DGS  +                   +SP G+ +       G   
Sbjct: 514 CQSLDN---QILVYSADGSFRQNKKKRFAGHTIAGYACNIGFSPDGKYI-----SSGTGS 565

Query: 416 SKLYSIDL-NGRNETLINTPAYAS-DPQWVG 444
            ++   D  NG+    +        D  W+ 
Sbjct: 566 GEMVFWDWKNGKIMKRLKAHKEVVIDHAWLP 596


>gi|46123951|ref|XP_386529.1| hypothetical protein FG06353.1 [Gibberella zeae PH-1]
          Length = 676

 Score = 46.9 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 60/356 (16%), Positives = 108/356 (30%), Gaps = 81/356 (22%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS--RILFVSESVVSG 187
           + D    +Q++     +          T      +    E GD     ++  V E  V+G
Sbjct: 59  VVDASTGQQVLSLPILNVYELGFSPCGTFVITWERPGKDENGDATKNLKVWRVVEEGVAG 118

Query: 188 IIKNSLCVM---DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             K  L       + G N++Y    +                 Y      + ++ Y    
Sbjct: 119 QDKQPLGRFVQKQQQGWNLQYTADEK-----------------YCARLVTNEVQFYESHD 161

Query: 245 RIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAM---DIYSVDLQSNATERLTNT 300
            +    K R+    +  LAP  S N   A+   ++        +++V L +N   + T  
Sbjct: 162 LVTVWNKLRVEGATNFALAPG-SQNHAVAVFVPERKGQPAAVKVFNVPLFTNPISQKTFF 220

Query: 301 LFINISASYSPDSSQIVFES----DREGKE-----QLYVMQSNGSDQKRISQDKEASYFD 351
               +   ++   S I+  +    DR GK       LY++ + G+   R+S DKE    D
Sbjct: 221 KGDKVQLKWNKLGSSILVLAQTDVDRSGKSYYGETTLYLLSTTGAFDARVSLDKEGPIHD 280

Query: 352 PVWSPQ-----------------------------------------GDLIAFTKFSGEK 370
             WSP                                          G  +    F    
Sbjct: 281 VSWSPNSREFGVVYGYMPAKATIFNHRAVATHSFPIGPRNTITFSPTGRFVLVAGFGNLA 340

Query: 371 FAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSID 422
             I +   +    ++   E  N     WSP  R ++ +        D G KL+ ++
Sbjct: 341 GQIDIYDLEKDFRKVTTIESGNPSVCEWSPDSRYIMTATTSPRLRVDNGIKLWHVN 396



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 57/164 (34%), Gaps = 16/164 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V  S  S   + +L ++   GA    ++  ++  + +  +SPN ++             +
Sbjct: 244 VDRSGKSYYGETTLYLLSTTGAFDARVSLDKEGPIHDVSWSPNSREFGVVYGYMPAKATI 303

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  + PR    FS  G+  L++   + A  I   DL+ +  +
Sbjct: 304 FNH---------RAVATHSFPIGPRNTITFSPTGRFVLVAGFGNLAGQIDIYDLEKDFRK 354

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREG-KEQLYVMQSNGS 336
             T          +SPDS  I     S R      + +   NG 
Sbjct: 355 VTTIESGNPSVCEWSPDSRYIMTATTSPRLRVDNGIKLWHVNGG 398


>gi|331268916|ref|YP_004395408.1| hypothetical protein CbC4_0731 [Clostridium botulinum BKT015925]
 gi|329125466|gb|AEB75411.1| hypothetical protein CbC4_0731 [Clostridium botulinum BKT015925]
          Length = 1472

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 91/242 (37%), Gaps = 42/242 (17%)

Query: 211 DQILFEPRFSPN----QQKVAYATYDDEDILRVYLMD--------------TRIDRAPKR 252
           D + F+   S +     + +A+ + D  + + +   +              T    + K+
Sbjct: 250 DAVYFKLAHSNDVKRIGETIAFTSKDLVESIFILNYNKNIIATGKLNTQFSTSRINSLKK 309

Query: 253 IGNFRSMILAPRFSSNGKRA------LISVQKDEAMDIYSVDLQS--NATERLTNTLFIN 304
           +G+      A   ++NG         +      +   +Y +D     N      N  +IN
Sbjct: 310 VGDTNKGNTAGNINNNGYVVEDQEGYVFYNNTGDRNSLYKLDSNGMFNNAIAKDNAQYIN 369

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +   +       V+ S+   K  LY ++++G+ +++IS+D  +          GD I F 
Sbjct: 370 VIGDW-------VYYSNYSDKGSLYKIKTDGTVRQKISEDMASYVTVS-----GDWIYFC 417

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             S     +  ++ DG+ +  + +  N ++   + SG  + F+   D       Y I+ +
Sbjct: 418 NHSDGG-RLYRIRPDGTSKSRISQSLNHESAYINVSGDWIYFTDVTDRHRP---YVINTD 473

Query: 425 GR 426
           G 
Sbjct: 474 GT 475


>gi|170117238|ref|XP_001889807.1| ectomycorrhiza-induced ankyrin-domain/NACHT-domain containing
           protein [Laccaria bicolor S238N-H82]
 gi|164635273|gb|EDQ99583.1| ectomycorrhiza-induced ankyrin-domain/NACHT-domain containing
           protein [Laccaria bicolor S238N-H82]
          Length = 533

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/226 (14%), Positives = 77/226 (34%), Gaps = 12/226 (5%)

Query: 136 RKQIIGKKFFSSPASWRKIAHTISD-DIYQSITGEKGDFNSRILFVSE--SVVSGIIKNS 192
           +  +I K + +  +   K+   +SD      +  + G     + F  +   VVSG    +
Sbjct: 316 KNSLIRKTYTAHVSRVPKVTLGLSDLWDPAELIMQNGSLVLSVGFSHDGSRVVSGSSDRT 375

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + + +     +          +    FS +  +V   ++D+     V + +         
Sbjct: 376 VRIWNVMTGGVEAELKGHTDQVNSVAFSQDGSRVVSGSHDE----TVRIWNVMTGEVEAE 431

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      + +  F  +G R ++S   D+ + I++V         L        S ++S D
Sbjct: 432 LKGHTDQVNSVAFLQDGSR-VVSGSDDKMVRIWNV-TTGKVEAELKGHTDWVNSVAFSQD 489

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            S++V  S     + + +        +   +   +      +S  G
Sbjct: 490 GSRVVSGSS---DKTVRIWNVMMGKVEAELKGHTSWVNSVAFSQDG 532


>gi|115386572|ref|XP_001209827.1| hypothetical protein ATEG_07141 [Aspergillus terreus NIH2624]
 gi|114190825|gb|EAU32525.1| hypothetical protein ATEG_07141 [Aspergillus terreus NIH2624]
          Length = 631

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 48/160 (30%), Gaps = 22/160 (13%)

Query: 265 FSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           FS  GK         E   +D+++ DL +    RLT+          SPD    V    R
Sbjct: 290 FSGRGKEVTYIGNSVESCNIDVFAADLTTGRVRRLTSDPEYVDPVDISPDDKWHVILDTR 349

Query: 323 EGKEQLYVMQSNG----------SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
               Q+++    G          +    +  +    +F P        +         + 
Sbjct: 350 GSGRQMFLAGMRGVPPLIDMVTVTAVSSVRNNGARRFFQP-------WLLDHDGDRGDYN 402

Query: 373 IGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRK 409
              +   G      + D N  A   P WS  G  + + + 
Sbjct: 403 GQQVNAAGDGSPGSINDPNWNAGADPKWSHDGTRIAYYQN 442



 Score = 43.5 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 53/170 (31%), Gaps = 9/170 (5%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N  ++  S   +     FS   ++V Y     E                +R+ +    +
Sbjct: 272 GNQLFINDSAISVGELRGFSGRGKEVTYIGNSVESCNIDVFAADLTTGRVRRLTSDPEYV 331

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE- 319
                S + K  +I   +     ++   ++      L + + +   +S   + ++  F+ 
Sbjct: 332 DPVDISPDDKWHVILDTRGSGRQMFLAGMRG--VPPLIDMVTVTAVSSVRNNGARRFFQP 389

Query: 320 ------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                  DR       V  +       I+     +  DP WS  G  IA+
Sbjct: 390 WLLDHDGDRGDYNGQQVNAAGDGSPGSINDPNWNAGADPKWSHDGTRIAY 439


>gi|325185877|emb|CCA20383.1| PREDICTED: similar to WD repeat domain 10 isoform 2 putative
           [Albugo laibachii Nc14]
          Length = 1223

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 71/187 (37%), Gaps = 22/187 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F P+  K   A        RV + D         +   + ++    ++ +GKR   +  
Sbjct: 25  AFRPDGLKFIAAV-----GTRVLVYDAIDGSLLHSLKGHKGIVYTVDYAHDGKR--FASG 77

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             + + I   D      +  T+T  I    +Y+P S  +   S       L+       +
Sbjct: 78  GADNVVIIWTDTAEGILKY-THTDSIQ-KLAYNPQSQCLA--SCTNSDFGLWA-----PE 128

Query: 338 QKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           QK +++ K  A     VW+  G  +A    +G    I V  KDG+++RL+     +    
Sbjct: 129 QKSVAKHKVVAKVLSAVWTHDGQYLALGLLNG---IISVRDKDGAEKRLIERTGPIWTLA 185

Query: 397 WS--PSG 401
           WS  P+G
Sbjct: 186 WSCNPNG 192


>gi|291244309|ref|XP_002742040.1| PREDICTED: Cdc20-like [Saccoglossus kowalevskii]
          Length = 527

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 70/219 (31%), Gaps = 13/219 (5%)

Query: 224 QKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              ++          ++  D R+ +     +      +    +S +G+    S   D  +
Sbjct: 300 SWNSFILSSGSRSGNIHHHDVRVANHHIATLSGHTQEVCGLEWSPDGRHLA-SGGNDNLL 358

Query: 283 DIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +++   + ++    L   T       + S+ P    I+          +     N     
Sbjct: 359 NVWQASIDNSGNTPLHTFTQHQAAVKAVSWCPWQPSILASGGGTADRHIRFWNVNSGVCL 418

Query: 340 RISQDKEASYFDPVWSPQ-GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
             S D ++     +WS +  ++I+   F+  +  I           L    S +     S
Sbjct: 419 N-SVDTKSQVCAILWSKEYKEMISAHGFANNQLIIWKYPTMTKVTELTGHSSRVLHMALS 477

Query: 399 PSGRSLIFSRKKDGDTGSKLYS---IDLNGRNETLINTP 434
           P G +++       D   +L+    +D + + E  + + 
Sbjct: 478 PDGTTVV---SGAADETLRLWKCFEVDAHKKKEKTLASG 513



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 51/156 (32%), Gaps = 11/156 (7%)

Query: 281 AMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           A ++Y  +  +   ++L    N      S S+  + + +       G+ QL+    + + 
Sbjct: 228 AGNVYLWNASNGEIQQLLQVENPEDYVSSVSWIKEGNYLA-VGTSSGEVQLW----DVAQ 282

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            KR+             S    +++    SG      V   +     L      +    W
Sbjct: 283 SKRLRNMTGHVARVGALSWNSFILSSGSRSGNIHHHDVRVANHHIATLSGHTQEVCGLEW 342

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           SP GR L        D    ++   ++    T ++T
Sbjct: 343 SPDGRHLA---SGGNDNLLNVWQASIDNSGNTPLHT 375


>gi|284053707|ref|ZP_06383917.1| WD-40 repeat protein [Arthrospira platensis str. Paraca]
          Length = 653

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 53/138 (38%), Gaps = 7/138 (5%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           + + ++    +D +   L  T        R    R  I    FS +G+    SV +D+ +
Sbjct: 521 KHLVWSDSAMKDQVESVLSQTAYSIQEFNRFSGHRGSINNISFSPDGRLIA-SVGQDKTV 579

Query: 283 DIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++  D          ++      A ++SPD+ QI     R+G  Q++ ++      +  
Sbjct: 580 KLWQPD---GELWANISSFGDETIAINFSPDNHQIA-VGVRDGNVQVWNVKPTPPTLEYS 635

Query: 342 SQDKEASYFDPVWSPQGD 359
            +  +      V+SP G 
Sbjct: 636 WEAHQQPVMYVVFSPDGK 653



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 39/114 (34%), Gaps = 17/114 (14%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FSP+ + +A  +   +  ++++  D  +      I +F    +A  FS
Sbjct: 551 FSGHRGSINNISFSPDGRLIA--SVGQDKTVKLWQPDGELWAN---ISSFGDETIAINFS 605

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SA----SYSPDSS 314
            +  +  + V +D  + +++V          T                +SPD  
Sbjct: 606 PDNHQIAVGV-RDGNVQVWNV-----KPTPPTLEYSWEAHQQPVMYVVFSPDGK 653


>gi|198474898|ref|XP_001356850.2| GA21709 [Drosophila pseudoobscura pseudoobscura]
 gi|198138597|gb|EAL33916.2| GA21709 [Drosophila pseudoobscura pseudoobscura]
          Length = 777

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 61/146 (41%), Gaps = 14/146 (9%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--LQSNATERL 297
           +++  +  R  + I    + I + R+S +G   L +  +D  + I+S    L+S   +  
Sbjct: 104 FIILNKSARVERSISAHGAAISSGRWSPDGAGLL-TAGEDGVIKIWSRSGMLRSTVVQ-- 160

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            N   I   A ++P+S+ IVF   + G   +  + +N    +   +  +       WS Q
Sbjct: 161 -NEEAIRC-ARWAPNSTSIVFC--QGGHISIKPLAANSKSIR--WRAHDGLVLSLSWSAQ 214

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQE 383
            ++IA     GE F   +    G+  
Sbjct: 215 SNIIA---SGGEDFRFKIWDAQGANL 237



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 71/218 (32%), Gaps = 18/218 (8%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLT 207
              R I    S  + +SI+      +S       + + +      + +  R G  +R   
Sbjct: 100 NDGRFIILNKSARVERSISAHGAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM-LRSTV 158

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              ++ +   R++PN   + +          + +     +    R      ++L+  +S+
Sbjct: 159 VQNEEAIRCARWAPNSTSIVFC-----QGGHISIKPLAANSKSIRWRAHDGLVLSLSWSA 213

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                  S  +D    I+  D Q           +   S +++P+   ++      G   
Sbjct: 214 QSNIIA-SGGEDFRFKIW--DAQGANLFTSAAEEYAITSVAFNPEKEFLLV-----GTFN 265

Query: 328 LYVMQSNGS---DQKRISQDKEASYFDPVWSPQGDLIA 362
           +  +  +     +  R +     S+F   WS  G  +A
Sbjct: 266 MLKLCHSTGWSYNSARFTAPSVGSFFTLAWSSDGTQVA 303


>gi|168032626|ref|XP_001768819.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679931|gb|EDQ66372.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 331

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/194 (15%), Positives = 59/194 (30%), Gaps = 16/194 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +    G             +    FSP+ +++   + D      V L D  
Sbjct: 124 SGSDDKTIKIWMVQGQKFLSTLIGHINWVRSAEFSPDNRRIVSGSDDR----TVRLWDLE 179

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNATER-LTNTLF 302
                ++  +   +I + RF  NG      +      D +    D++S    +       
Sbjct: 180 RHECIQQFNDGMGLINSVRFHPNG-----CLLGTGGSDNWCKIWDVRSKMLVQHYAANGG 234

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I  S  + P  +   F         + V            Q  E +     +SP G+  A
Sbjct: 235 IVNSVCFHPSGN---FLLSTCEDSTIRVWDLREGQILYSLQGHEGATLCAEFSPTGEYFA 291

Query: 363 FTKFSGEKFAIGVM 376
            +  + E   I + 
Sbjct: 292 -SGSADEHVRIAIC 304



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/249 (11%), Positives = 80/249 (32%), Gaps = 22/249 (8%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y+ +  +   ++  +  +   V SG    ++ +          +  +    +    FS +
Sbjct: 59  YRFLGHQGPVYSVAVSPLDNLVASGSKDKTVRLWLPTVEAKSSVIKAHGGAVRTVAFSHD 118

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            Q +   + D      + +   +  +    +    + + +  FS + +R + S   D  +
Sbjct: 119 GQCLLSGSDDK----TIKIWMVQGQKFLSTLIGHINWVRSAEFSPDNRRIV-SGSDDRTV 173

Query: 283 DIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKR 340
            ++  DL+ +   ++  + + +  S  + P+   +       G +    +         +
Sbjct: 174 RLW--DLERHECIQQFNDGMGLINSVRFHPNGCLL----GTGGSDNWCKIWDVRSKMLVQ 227

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---- 396
                        + P G+ +  T        I V      + ++L      +  T    
Sbjct: 228 HYAANGGIVNSVCFHPSGNFLLSTCEDST---IRVWDL--REGQILYSLQGHEGATLCAE 282

Query: 397 WSPSGRSLI 405
           +SP+G    
Sbjct: 283 FSPTGEYFA 291


>gi|149582596|ref|XP_001520342.1| PREDICTED: similar to Acylamino-acid-releasing enzyme (AARE)
           (Acyl-peptide hydrolase) (APH)
           (Acylaminoacyl-peptidase), partial [Ornithorhynchus
           anatinus]
          Length = 683

 Score = 46.6 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/248 (14%), Positives = 77/248 (31%), Gaps = 41/248 (16%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS--LCVM 196
           +  KK   + + ++      SD+  +    +      + +F  +   S   K+   LCV+
Sbjct: 117 VAEKKRSKTESFFQAKPAEFSDETPRMKKEDSTVKGDQFVFHEDWGESLGSKSVPVLCVL 176

Query: 197 DRDGANIRYLTPSRDQIL-FEPRFSPNQQKVAYATYDDEDIL----------RVYLMDTR 245
           D D  NI  L      I   +  ++P    V +  +  E                     
Sbjct: 177 DIDSGNISVLEGIPGHISPGQAIWAPRDTGVVFVGWWHEPFRLGVRFCSNRRSALFYLNL 236

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNATERLTNT 300
                + + +      +PR S +    +               +  +D  S    RLT  
Sbjct: 237 TSGKCEPLTDDTKASWSPRLSPDQCHIVYLRYTTLGPHHQCSQLCLLDWYS----RLTTV 292

Query: 301 LFINISAS------------------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           + +++                     +S DS ++VF+S    ++ L+ +         ++
Sbjct: 293 I-VDVVPRQSKGYFSGIYCNLLPLSCWSDDSQRVVFDSGNRSRQDLFSVDMLTGSVIPLT 351

Query: 343 QDKEASYF 350
               A+ +
Sbjct: 352 SGFPAASW 359



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 47/142 (33%), Gaps = 23/142 (16%)

Query: 313 SSQIVFESDREGK------EQLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTK 365
             Q VF  D            L V+  +  +   +       S    +W+P+   + F  
Sbjct: 152 GDQFVFHEDWGESLGSKSVPVLCVLDIDSGNISVLEGIPGHISPGQAIWAPRDTGVVFVG 211

Query: 366 FSGEKFAIGV------------MKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDG 412
           +  E F +GV            +     +   L +D+    +P  SP    +++ R    
Sbjct: 212 WWHEPFRLGVRFCSNRRSALFYLNLTSGKCEPLTDDTKASWSPRLSPDQCHIVYLRYTTL 271

Query: 413 DTG---SKLYSIDLNGRNETLI 431
                 S+L  +D   R  T+I
Sbjct: 272 GPHHQCSQLCLLDWYSRLTTVI 293


>gi|322800171|gb|EFZ21256.1| hypothetical protein SINV_04783 [Solenopsis invicta]
          Length = 521

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 38/100 (38%), Gaps = 5/100 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ +  +D  N+  +       ++   FSP+ + +A       D   + + D  
Sbjct: 398 TGSADKTIRLWSKDDGNLLRVYVGAQSTIYTLAFSPDGKYLA----AAGDDKSISIWDLA 453

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +     +   +  ++   +S +G+    S   D  + ++
Sbjct: 454 SNNILTELKGHKDTVMNVDWSLDGQYIA-SASLDGIVRLW 492



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 54/139 (38%), Gaps = 15/139 (10%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQS 333
           +   D    ++S+D       R+    F++++   + P++  +   S     + + +   
Sbjct: 356 TGSHDRTAKLWSLDRTF--PLRIFAGHFLDVNCIKFHPNARYLATGS---ADKTIRLWSK 410

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----D 389
           +  +  R+    +++ +   +SP G  +A    +G+  +I +     +   +L E     
Sbjct: 411 DDGNLLRVYVGAQSTIYTLAFSPDGKYLA---AAGDDKSISIWDLASNN--ILTELKGHK 465

Query: 390 SNLQAPTWSPSGRSLIFSR 408
             +    WS  G+ +  + 
Sbjct: 466 DTVMNVDWSLDGQYIASAS 484



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 18/153 (11%), Positives = 42/153 (27%), Gaps = 5/153 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +  +                  L         +        +   +F  N +    +
Sbjct: 340 YPIWCMDTSVFNLYIGTGSHDRTAKLWSLDRTFPLRIFAGHFLDVNCIKFHPNARYLA-T 398

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D+ + ++S D   N             + ++SPD   +    D    + + +     
Sbjct: 399 GSADKTIRLWSKD-DGNLLRVYVGAQSTIYTLAFSPDGKYLAAAGD---DKSISIWDLAS 454

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++     +  + +  +  WS  G  IA     G
Sbjct: 455 NNILTELKGHKDTVMNVDWSLDGQYIASASLDG 487


>gi|322708030|gb|EFY99607.1| eukaryotic translation initiation factor subunit eIF2A, putative
           [Metarhizium anisopliae ARSEF 23]
          Length = 684

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 7/160 (4%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V  S  S   + +L ++  +GA    +T  ++  + +  +SPN ++             +
Sbjct: 244 VDRSGKSYYGETTLYLLSTNGAFDARVTLDKEGPIHDVSWSPNSREFGVVYGYMPAKATI 303

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +      DRA  +            FS N +  L++   + A  I   DL+ +  +  T 
Sbjct: 304 FN-----DRAVAKYSFPLGPRNTITFSPNARFVLVAGFGNLAGQIDVYDLEKDYRKVCTI 358

Query: 300 TLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSD 337
                    +SPDS  I     S R   +    +   G  
Sbjct: 359 ESGNPSVCEWSPDSRYIMTATTSPRLRVDNGVKLWHVGGS 398



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 66/210 (31%), Gaps = 19/210 (9%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKD------ 279
            +          V + +  + + P  +   F+   +  +++  G   L+  Q D      
Sbjct: 190 VFVPERKGQPAVVKVYNVPLFQNPISQKTFFKGDKVQFKWNKRGSSLLVLAQTDVDRSGK 249

Query: 280 ---EAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                  +Y +        R+T +        S+SP+S +  F            + ++ 
Sbjct: 250 SYYGETTLYLLSTNGAFDARVTLDKEGPIHDVSWSPNSRE--FGVVYGYMPAKATIFNDR 307

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQA 394
           +  K        +     +SP    +    F      I V   +    ++  +E  N   
Sbjct: 308 AVAKYSFPLGPRNTI--TFSPNARFVLVAGFGNLAGQIDVYDLEKDYRKVCTIESGNPSV 365

Query: 395 PTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
             WSP  R ++ +        D G KL+ +
Sbjct: 366 CEWSPDSRYIMTATTSPRLRVDNGVKLWHV 395



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 77/208 (37%), Gaps = 22/208 (10%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAM---DIYSVDLQSNATERLTNTLFINISAS 308
           R+    +  LAP  S N   A+   ++        +Y+V L  N   + T      +   
Sbjct: 170 RVEGAANFALAPG-SQNHAVAVFVPERKGQPAVVKVYNVPLFQNPISQKTFFKGDKVQFK 228

Query: 309 YSPDSSQIVFES----DREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           ++   S ++  +    DR GK       LY++ +NG+   R++ DKE    D  WSP   
Sbjct: 229 WNKRGSSLLVLAQTDVDRSGKSYYGETTLYLLSTNGAFDARVTLDKEGPIHDVSWSPNSR 288

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
              F    G   A   +  D +  +           T+SP+ R ++ +   +      +Y
Sbjct: 289 E--FGVVYGYMPAKATIFNDRAVAKYSFPLGPRNTITFSPNARFVLVAGFGNLAGQIDVY 346

Query: 420 SIDLNGRNETLINTPAYASDPQ---WVG 444
            ++ + R    I     + +P    W  
Sbjct: 347 DLEKDYRKVCTI----ESGNPSVCEWSP 370


>gi|294667772|ref|ZP_06732982.1| aminopeptidase precursor [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292602398|gb|EFF45839.1| aminopeptidase precursor [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 685

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 52/140 (37%), Gaps = 10/140 (7%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKF 366
           S SPD   + + +  EG   ++V   +  DQ R I++D      +  W+ Q + + + + 
Sbjct: 51  SISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPNTLLYLRD 110

Query: 367 SGE--KFAIGVMKKDGSQERLLVEDSNLQAPTW-----SPSGRSLIFSRKKDGDTGSKLY 419
           +G    F +  +  +    + L       A  +      P   S++            LY
Sbjct: 111 NGGDEDFHLFSVNLNDGSSKDLTPFKKTNAEVYRVSAQHP--ESIMVGMNDRDAKWHDLY 168

Query: 420 SIDLNGRNETLINTPAYASD 439
            +DL     TL+     + D
Sbjct: 169 RVDLASGKRTLVQKNTDSLD 188



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 61/171 (35%), Gaps = 13/171 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLF---INISASYSPDSSQIVFE 319
             S +GK        +  ++++   + + +    +T        N   +Y P+   +++ 
Sbjct: 51  SISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPN--TLLYL 108

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIG 374
            D  G E   L+ +  N    K ++  K+ +      S   P+  ++       +   + 
Sbjct: 109 RDNGGDEDFHLFSVNLNDGSSKDLTPFKKTNAEVYRVSAQHPESIMVGMNDRDAKWHDLY 168

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSIDLN 424
            +     + R LV+ +      +   G   L ++ +   D G +L   D N
Sbjct: 169 RVDLASGK-RTLVQKNTDSLDAYLLDGDYQLRYATRATDDAGRELLVPDGN 218



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 8/94 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDS----NLQAPTWSP 399
                 +   SP G  +++         + V   D   Q R + +D+         T+ P
Sbjct: 43  GNPERANVSISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQP 102

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
           +  +L++ R   GD    L+S++L +G ++ L  
Sbjct: 103 N--TLLYLRDNGGDEDFHLFSVNLNDGSSKDLTP 134


>gi|255088219|ref|XP_002506032.1| predicted protein [Micromonas sp. RCC299]
 gi|226521303|gb|ACO67290.1| predicted protein [Micromonas sp. RCC299]
          Length = 372

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 54/158 (34%), Gaps = 10/158 (6%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASY 309
            +   R  + A  +S        S   D+   ++ +  D  +  +  L        S ++
Sbjct: 35  VVRTHRGSVYACAWSPTAADCFASGGGDDCAFVHRIGPDASTVTSVALKAHTDTVSSVAF 94

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + D + +      EG+  ++    +  +  R  +          W P+G+++       E
Sbjct: 95  NHDGTLLA-TGGLEGRACIW--SVSTGELLRTLEGPGGGLEWVRWHPKGNVLLAGS---E 148

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
            F   +   D ++   +    +       +SP GR ++
Sbjct: 149 DFTAWMWNADNAELMQVFAGHSNSVLCGGFSPDGRGVV 186



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 21/174 (12%), Positives = 55/174 (31%), Gaps = 12/174 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-IGNFRSMILAPRFSSNGKRALISV 276
            +SP      +A+   +D   V+ +           +      + +  F+ +G     + 
Sbjct: 47  AWSPTAAD-CFASGGGDDCAFVHRIGPDASTVTSVALKAHTDTVSSVAFNHDGTLLA-TG 104

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +    I+SV   +    R        +    + P  + ++  S+       ++  ++ 
Sbjct: 105 GLEGRACIWSV--STGELLRTLEGPGGGLEWVRWHPKGNVLLAGSE---DFTAWMWNADN 159

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           ++  ++      S     +SP G  +    F G    + V      +   L + 
Sbjct: 160 AELMQVFAGHSNSVLCGGFSPDGRGVVTGSFDGS---LRVWAPRSGECVTLFQG 210


>gi|295662541|ref|XP_002791824.1| WD repeat-containing protein [Paracoccidioides brasiliensis Pb01]
 gi|226279476|gb|EEH35042.1| WD repeat-containing protein [Paracoccidioides brasiliensis Pb01]
          Length = 515

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 58/139 (41%), Gaps = 9/139 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           ++E +VS     ++ + D   +N          + +    FSP+   +A A++D+     
Sbjct: 370 ITERLVSASDDFTMFLWDPVSSNKPVARMLGHQKEVNHVTFSPDGAYIASASFDN----H 425

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
           V L + R  +    +      +    FS++  R L+S  KD  + ++  D+++      L
Sbjct: 426 VKLWNARDGKFISSLRGHVGAVYQCCFSAD-SRLLVSSSKDTTLKVW--DVRTGKLSMDL 482

Query: 298 TNTLFINISASYSPDSSQI 316
              L    +  +SPD  ++
Sbjct: 483 PGHLDEVYAVDWSPDGEKV 501



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 34/121 (28%), Gaps = 5/121 (4%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                 ++   R+   +  +    FS +G     S   D  + +++          L   
Sbjct: 386 WDPVSSNKPVARMLGHQKEVNHVTFSPDGAYIA-SASFDNHVKLWNA-RDGKFISSLRGH 443

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +       +S DS  +V  S       L V                   +   WSP G+ 
Sbjct: 444 VGAVYQCCFSADSRLLVSSSK---DTTLKVWDVRTGKLSMDLPGHLDEVYAVDWSPDGEK 500

Query: 361 I 361
           +
Sbjct: 501 V 501



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 30/97 (30%), Gaps = 4/97 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I   S       + +  +         +    + +   +S    L+  +   
Sbjct: 409 TFSPDGAYIASASF---DNHVKLWNARDGKFISSLRGHVGAVYQCCFSADSRLLV-SSSK 464

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                +  ++       L      + A  WSP G  +
Sbjct: 465 DTTLKVWDVRTGKLSMDLPGHLDEVYAVDWSPDGEKV 501


>gi|195434855|ref|XP_002065417.1| GK14679 [Drosophila willistoni]
 gi|194161502|gb|EDW76403.1| GK14679 [Drosophila willistoni]
          Length = 800

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/203 (14%), Positives = 70/203 (34%), Gaps = 30/203 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+SP+   +   T  ++ +++++   +R       +      I   R+S N    +    
Sbjct: 132 RWSPDAAGLL--TAGEDGVIKIW---SRSGMLRSTVIQSDESIRCARWSPNSTSIVFC-- 184

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGS 336
           +   + I  +   S    R      + +S S+S  S+ I       G++ +  +  + G+
Sbjct: 185 QGGHISIKPLAANSK-LIRWRAHDGLVLSLSWSQQSNIIA----SGGEDFRFKIWDAQGA 239

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +    S  +E +     ++P+ D +    F+     + +    G         +   AP+
Sbjct: 240 NLY-TSSAEEYAITSVAFNPEKDFLLIGTFN----MLKLCHSTG----WTYNSARFTAPS 290

Query: 397 --------WSPSGRSLIFSRKKD 411
                   WS  G  +       
Sbjct: 291 VGSFYTLAWSADGTQVACGSSTG 313



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/238 (13%), Positives = 76/238 (31%), Gaps = 18/238 (7%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGA 201
               S    R I    S  + +SI+      +S       + + +      + +  R G 
Sbjct: 98  TLLISSNDGRFIILNKSARVERSISAHTAAISSGRWSPDAAGLLTAGEDGVIKIWSRSGM 157

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
            +R      D+ +   R+SPN   + +          + +     +    R      ++L
Sbjct: 158 -LRSTVIQSDESIRCARWSPNSTSIVFC-----QGGHISIKPLAANSKLIRWRAHDGLVL 211

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           +  +S        S  +D    I+  D Q       +   +   S +++P+   ++    
Sbjct: 212 SLSWSQQSNIIA-SGGEDFRFKIW--DAQGANLYTSSAEEYAITSVAFNPEKDFLL---- 264

Query: 322 REGKEQLYVMQSNGS---DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             G   +  +  +     +  R +     S++   WS  G  +A    +G+      +
Sbjct: 265 -IGTFNMLKLCHSTGWTYNSARFTAPSVGSFYTLAWSADGTQVACGSSTGQLIVAYAI 321


>gi|220925162|ref|YP_002500464.1| 40-residue YVTN family beta-propeller repeat-containing protein
           [Methylobacterium nodulans ORS 2060]
 gi|219949769|gb|ACL60161.1| 40-residue YVTN family beta-propeller repeat protein
           [Methylobacterium nodulans ORS 2060]
          Length = 330

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/220 (16%), Positives = 70/220 (31%), Gaps = 37/220 (16%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P +    Y T +  + + V    T    A   +G     +     S +GK+  +    D
Sbjct: 25  APARAYTVYVTNEKGNSVSVIDSTTLQVTATWPVGRRPRGV---TISHDGKQLFVCASDD 81

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + +D   VD  +    +         S    PD    +F     G   LY+   + S   
Sbjct: 82  DRID--VVDTATGKITK---------SLRSGPDPE--LFILHPSGNP-LYIANEDDSQVT 127

Query: 340 RISQDKEASYFDPVW---------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-- 388
            +  +K     +            SP G ++  T  +           D +  +++    
Sbjct: 128 VLDVEKNRIVAEIPVGVEPEGMGLSPDGKVLVNTSETTNMAHF----IDTTTHQVIDNVL 183

Query: 389 -DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            D+  +   +S  G+ L  S +  G        ID+  R 
Sbjct: 184 VDARPRFAEFSADGKWLWVSAEVGGTVS----VIDVAARK 219


>gi|119467836|ref|XP_001257724.1| wd-repeat protein [Neosartorya fischeri NRRL 181]
 gi|119405876|gb|EAW15827.1| wd-repeat protein [Neosartorya fischeri NRRL 181]
          Length = 588

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 16/157 (10%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-------ISAS 308
             S++   RFS +GK                 D+ +           ++        S  
Sbjct: 282 HDSVVCCVRFSRDGKYLA----TGCNRSAQIFDVTTGQIVATLQDESVDKDGDLYIRSVC 337

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD   +   ++    +Q+ V        K I    E   +   ++  G  IA +    
Sbjct: 338 FSPDGKYLATGAE---DKQIRVWDIAARTIKHIFTGHEQDIYSLDFAGNGRYIA-SGSGD 393

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           +   +  +  DG     L  +  +     SP G  + 
Sbjct: 394 KTVRLWDI-LDGKLVYTLSIEDGVTTVAMSPDGHYVA 429


>gi|83771281|dbj|BAE61413.1| unnamed protein product [Aspergillus oryzae]
          Length = 782

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 8/142 (5%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G + +          +   D  +     +L         A +SPD S+++  S   
Sbjct: 472 FSHDGTKLV---TAGRDHSVIIYDTSTFAVLHKLMEHDDGVAHACWSPDDSKLITCSQ-- 526

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             ++  V   +                   W+  GD         +   +      G   
Sbjct: 527 -DKKARVWSVDTGRCLLTINHHRQPVTAAAWAADGDSFVTASLDKDS-HLCHWSMRGHAL 584

Query: 384 RLLVEDSNLQAPTWSPSGRSLI 405
            +   D  +Q    +P GR LI
Sbjct: 585 HMWQGDFRVQDCAITPDGRRLI 606



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/205 (12%), Positives = 68/205 (33%), Gaps = 16/205 (7%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI-------YQSITGEKGD 172
             +RL +   L D   + QI    + ++       +  + D          +        
Sbjct: 411 PDNRLAI---LLDHVKQNQINQCLYHNTATPPSLYSDHMCDRADFPSRPGIELSQHSDEV 467

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           +  +       +V+    +S+ + D     + +     D  +    +SP+  K+   + D
Sbjct: 468 WYCQFSHDGTKLVTAGRDHSVIIYDTSTFAVLHKLMEHDDGVAHACWSPDDSKLITCSQD 527

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +      +      R    I + R  + A  ++++G    ++   D+   +    ++ +
Sbjct: 528 KK----ARVWSVDTGRCLLTINHHRQPVTAAAWAADGDS-FVTASLDKDSHLCHWSMRGH 582

Query: 293 ATERLTNTLFINISASYSPDSSQIV 317
           A        F     + +PD  +++
Sbjct: 583 ALHMW-QGDFRVQDCAITPDGRRLI 606


>gi|52138693|ref|NP_001004402.1| WD repeat-containing protein 1 [Gallus gallus]
 gi|12230748|sp|O93277|WDR1_CHICK RecName: Full=WD repeat-containing protein 1; AltName:
           Full=Actin-interacting protein 1; Short=AIP1
 gi|3420175|gb|AAD05042.1| WDR1 protein [Gallus gallus]
          Length = 609

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 57/385 (14%), Positives = 119/385 (30%), Gaps = 70/385 (18%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 11  FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVVIRNIDNPAIADIYTE----HAHQVVVA 66

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           +    G       +  + R+WD   ++ ++  ++       + +A               
Sbjct: 67  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDLA--------------- 111

Query: 171 GDFNSRILFVSESVVSGIIKNSLC-----VMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
              +S+ + V            L      V +  G N   +  S D     P        
Sbjct: 112 WTEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHN--KVINSVDIKQTRPYRLATGSD 169

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
              A + +    +              + +    +   RFS +G R   +   D    I+
Sbjct: 170 DNCAAFFEGPPFKFKFT----------LSDHTRFVNCVRFSPDGNRFA-TASADG--QIF 216

Query: 286 SVDLQSNATE-RLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             D ++      L      +      S+SPDSSQ++  S   G +   +    G++    
Sbjct: 217 IYDGKTGEKVCALGGGKAHDGGIYAISWSPDSSQLLSAS---GDKTAKIWDV-GANSVVS 272

Query: 342 SQDKEASYFD----PVWSPQ-------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
           + +  ++  D     +W             I +   +     + V+K      + L    
Sbjct: 273 TFNMGSNVLDQQLGCLWQKDHLLSLSLSGYINYLDKNNPDKPLRVIKGHSKSIQCLTVHK 332

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTG 415
           N         G+S I+S   DG   
Sbjct: 333 NG--------GKSYIYSGSNDGHIN 349


>gi|9257257|ref|NP_059830.1| WD repeat-containing protein 1 isoform 1 [Homo sapiens]
 gi|12643636|sp|O75083|WDR1_HUMAN RecName: Full=WD repeat-containing protein 1; AltName:
           Full=Actin-interacting protein 1; Short=AIP1; AltName:
           Full=NORI-1
 gi|3420179|gb|AAD05044.1| WDR1 protein [Homo sapiens]
 gi|5103673|dbj|BAA31855.2| NORI-1 [Homo sapiens]
 gi|12803341|gb|AAH02489.1| WD repeat domain 1 [Homo sapiens]
 gi|158256660|dbj|BAF84303.1| unnamed protein product [Homo sapiens]
          Length = 606

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/268 (15%), Positives = 86/268 (32%), Gaps = 40/268 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTE----HAHQVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 65  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 124

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-------GANIRYLTP 208
                          G+       ++   +       L     D       G   ++   
Sbjct: 125 EKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFT 184

Query: 209 SRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
             D   F    RFSP+  + A A+ D     ++Y+ D +       +G  +     I A 
Sbjct: 185 IGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAI 240

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +S +    L S   D+   I+ V + S
Sbjct: 241 SWSPDSTHLL-SASGDKTSKIWDVSVNS 267


>gi|66824199|ref|XP_645454.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
 gi|74997356|sp|Q55AR8|SNR40_DICDI RecName: Full=U5 small nuclear ribonucleoprotein 40 kDa protein;
           Short=U5 snRNP 40 kDa protein; AltName: Full=WD
           repeat-containing protein 57 homolog
 gi|60473643|gb|EAL71584.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
          Length = 355

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 49/330 (14%), Positives = 105/330 (31%), Gaps = 34/330 (10%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           VLV G        + + E ++      ++II     +S     K+ H     I Q I  +
Sbjct: 12  VLVNGSNDTTPNKKQKNELQVVSSGGGREIILGTERTS-----KLEH----PIMQLIGHK 62

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRFSPNQQKVAY 228
              ++ +      ++ SG     + + +  G  I Y +       + E  +S +  ++ Y
Sbjct: 63  GEIYSCKFNSYGTALASGGSDKEIFLWNVYGECINYSVLKGHKGTILELHWSTDSNEI-Y 121

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
               D+    + + D+      KRI     ++ +   +  G   + S   D +  I+  D
Sbjct: 122 TACTDK---SIGVWDSNKGELIKRIREHSGVVNSCCPARRGPPLVASGSDDRSARIF--D 176

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEA 347
            +S  +  L    +   S  +S  S Q++          + V      +    +    + 
Sbjct: 177 TRSKGSTHLFQHKYPVTSVCFSDASDQLI---TGGIDNVIRVWDIRNQEDPLYTLASHQD 233

Query: 348 SYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAP------TWSP 399
           +      S  G  +         + + I          +     +           +WS 
Sbjct: 234 TITSTSVSKDGAYLLSNSMDNSCKIWDIRPYAPPNRNIK-TFNGAQNNFEKNLIKSSWSI 292

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            GR +       G +  ++Y  D N +   
Sbjct: 293 DGRRIGC-----GSSDRQVYIWDTNTKQLQ 317


>gi|300865742|ref|ZP_07110505.1| Peptidase, S9A/B/C family, catalytic domain protein [Oscillatoria
           sp. PCC 6506]
 gi|300336273|emb|CBN55655.1| Peptidase, S9A/B/C family, catalytic domain protein [Oscillatoria
           sp. PCC 6506]
          Length = 654

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 50/381 (13%), Positives = 114/381 (29%), Gaps = 60/381 (15%)

Query: 95  DSIPRFQDWNS-LGAQVLV-----TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP 148
           + I  +  W S + + ++V      G +  +G D   +E R  +    + +I ++     
Sbjct: 2   NQIANYGSWKSPITSDLIVSGTIGLGGISLDGDDIYWMEGRPSE--GGRNVIVRRTSDG- 58

Query: 149 ASWRKIAHTISDDI---YQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIR 204
                    I+D     +   T          L    +V  S      L     D +  +
Sbjct: 59  --------KIADVTPPPFNVRTRVHEYGGGAFLVADRTVYFSNFTDQRLYCQTID-SEPQ 109

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDD----EDILRVYLMDTRIDRAPKRIGNFRSMI 260
            LTP  D    +      + ++ Y   D     E +  +  ++       + + +     
Sbjct: 110 PLTPVGDWRYADGIIDRQRNRLIYIREDHTTGSEPVNTIVSINLDNGEDIQILAHGHDFY 169

Query: 261 LAPRFSSNGKRALISVQKD-----EAMDIYSVDLQSN---ATERLTNTLFINI--SASYS 310
            +PR S +  +             +  +++  +++++     ++L             +S
Sbjct: 170 ASPRLSPDNSQLCWISWNHPNMPWDGTELWVAEIKADGYLGEKQLVAGGVSESIFQPEWS 229

Query: 311 PDSSQIVFESDREGKEQLYVMQSN------------GSDQKRISQDKEASYFDPVWSPQ- 357
            D   + F SDR      Y  +              G + + +  +  A +  P W    
Sbjct: 230 RDG-VLYFVSDRSNWWNFYRWKPIQLTSETNSLKKWGGEIEPL-CEMPAEFGLPQWVFGM 287

Query: 358 -------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
                  GD I  T      + +  +     Q   +       +   S   R ++F    
Sbjct: 288 LTYAFVSGDRIICTYTQQGIWHLASIDLKTKQLTTIETPYTDISGIKSHDDR-VVFLAGS 346

Query: 411 DGDTGSKLYSIDLNGRNETLI 431
                + +  +DL      ++
Sbjct: 347 P-TESTAIVQLDLATNQLQVL 366


>gi|291449366|ref|ZP_06588756.1| protein kinase [Streptomyces roseosporus NRRL 15998]
 gi|291352313|gb|EFE79217.1| protein kinase [Streptomyces roseosporus NRRL 15998]
          Length = 1339

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 76/278 (27%), Gaps = 28/278 (10%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWDV+  K  +            + A    D          G  +  + F   +   G
Sbjct: 483 LRLWDVRSGKCPVA-------VQGHEGAVRTVDVSADGRFALSGGGDEVVAFWDLT--EG 533

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                  V   +G             + + R S +   +A  +        ++  + R  
Sbjct: 534 RCLGRAAVPGPEG-------RPAPGAIRQVRLSGDAS-LALCSTSYGK---IFSWEFRAG 582

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R    +            S +G+ AL S    E   +   DL +     +      +   
Sbjct: 583 RGRAVLAGPEEHGRTLEVSGDGRWALASNGLAENDAVRLWDLSTGQLRHVLRGARFSEPL 642

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+ PD +  V  S  +GK  + +   +     R       +      S  G         
Sbjct: 643 SFGPDGASAV-TSGADGK--ILIWDVDSGTCVRTLGGHSTTASAVSLSSDGRHAI---SG 696

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWS--PSGRS 403
           G   ++   +    +     E    +    +  P GR 
Sbjct: 697 GRDKSLRFWELRTGRCLRTFEGLENEPLAVAPGPDGRH 734



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                 +  R     + +      + +   S +G R  ++   D    ++  DL S A  
Sbjct: 820 GRSAVRVGLRSAWPGRALHAHDRHLHSVDVSGDG-RIAVTSGSDRTARLW--DLDSGACI 876

Query: 296 RLTNTLFINISASY--SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           R+ +    +  AS   S D    V    ++G  +L+  ++      R+            
Sbjct: 877 RVLDGHSHHTVASVRLSADGRY-VLTGCQDGTVRLW--RAADGACLRVLDGHLHGVLWLG 933

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +SP G   A     G    +  ++   +   L            +  GR L+  R    D
Sbjct: 934 FSPDGRS-ALVGAGGNMVRLWDLESARAPMTLEAARGQADTAG-ATDGRRLVAHRGYAAD 991

Query: 414 TGSKLYSID 422
           +  +L+ +D
Sbjct: 992 SV-QLWDLD 999


>gi|239945910|ref|ZP_04697847.1| protein kinase [Streptomyces roseosporus NRRL 15998]
          Length = 1337

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/278 (14%), Positives = 76/278 (27%), Gaps = 28/278 (10%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWDV+  K  +            + A    D          G  +  + F   +   G
Sbjct: 481 LRLWDVRSGKCPVA-------VQGHEGAVRTVDVSADGRFALSGGGDEVVAFWDLT--EG 531

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                  V   +G             + + R S +   +A  +        ++  + R  
Sbjct: 532 RCLGRAAVPGPEG-------RPAPGAIRQVRLSGDAS-LALCSTSYGK---IFSWEFRAG 580

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R    +            S +G+ AL S    E   +   DL +     +      +   
Sbjct: 581 RGRAVLAGPEEHGRTLEVSGDGRWALASNGLAENDAVRLWDLSTGQLRHVLRGARFSEPL 640

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+ PD +  V  S  +GK  + +   +     R       +      S  G         
Sbjct: 641 SFGPDGASAV-TSGADGK--ILIWDVDSGTCVRTLGGHSTTASAVSLSSDGRHAI---SG 694

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWS--PSGRS 403
           G   ++   +    +     E    +    +  P GR 
Sbjct: 695 GRDKSLRFWELRTGRCLRTFEGLENEPLAVAPGPDGRH 732



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                 +  R     + +      + +   S +G R  ++   D    ++  DL S A  
Sbjct: 818 GRSAVRVGLRSAWPGRALHAHDRHLHSVDVSGDG-RIAVTSGSDRTARLW--DLDSGACI 874

Query: 296 RLTNTLFINISASY--SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           R+ +    +  AS   S D    V    ++G  +L+  ++      R+            
Sbjct: 875 RVLDGHSHHTVASVRLSADGRY-VLTGCQDGTVRLW--RAADGACLRVLDGHLHGVLWLG 931

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +SP G   A     G    +  ++   +   L            +  GR L+  R    D
Sbjct: 932 FSPDGRS-ALVGAGGNMVRLWDLESARAPMTLEAARGQADTAG-ATDGRRLVAHRGYAAD 989

Query: 414 TGSKLYSID 422
           +  +L+ +D
Sbjct: 990 SV-QLWDLD 997


>gi|117923604|ref|YP_864221.1| hypothetical protein Mmc1_0288 [Magnetococcus sp. MC-1]
 gi|117607360|gb|ABK42815.1| protein of unknown function DUF323 [Magnetococcus sp. MC-1]
          Length = 922

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 54/142 (38%), Gaps = 12/142 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+  ++A    +      + +    ++    R+   R+ + A  FS   +R L +   
Sbjct: 72  FSPDGNRLA----ETAQGGGIQVRTVGLEDQAVRLTGHRNGVTAMAFSPASQRLL-TAGG 126

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + ++ +D  S     L         A++S D   I+  SD +G  +L+      ++ 
Sbjct: 127 DLLVKLWDLD-NSQLIYTLAGHAAPVRDAAFSSDGRFILTASD-DGTVRLW-----DTES 179

Query: 339 KRISQDKEASYFDPVWSPQGDL 360
            R+    +       ++P    
Sbjct: 180 GRMLGGHQRRTRLLTFTPDRRY 201



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 55/163 (33%), Gaps = 11/163 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G R      +   + + +V L+     RLT       + ++SP S +++      G
Sbjct: 72  FSPDGNRLA-ETAQGGGIQVRTVGLED-QAVRLTGHRNGVTAMAFSPASQRLL---TAGG 126

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +   + S          A   D  +S  G  I      G    + +   +  +  
Sbjct: 127 DLLVKLWDLDNSQLIYTLAGHAAPVRDAAFSSDGRFILTASDDGT---VRLWDTESGRM- 182

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           L       +  T++P  R    S   D     + + + + G+ 
Sbjct: 183 LGGHQRRTRLLTFTPD-RRYALSVDTDEPRLMRRWEV-VTGKT 223



 Score = 39.6 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 8/88 (9%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           V+SP G+ +A T   G    +  +  +    RL    + + A  +SP+ + L+      G
Sbjct: 71  VFSPDGNRLAETAQ-GGGIQVRTVGLEDQAVRLTGHRNGVTAMAFSPASQRLL---TAGG 126

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDP 440
           D   KL+ +D    N  LI T A  + P
Sbjct: 127 DLLVKLWDLD----NSQLIYTLAGHAAP 150



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 50/139 (35%), Gaps = 14/139 (10%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            A +SPD +++  E+ + G  Q+  +        R++  +        +SP    +    
Sbjct: 69  EAVFSPDGNRLA-ETAQGGGIQVRTVGLED-QAVRLTGHRNG-VTAMAFSPASQRLL--- 122

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +G    + +   D SQ    +      ++   +S  GR ++ +     D   +L+  + 
Sbjct: 123 TAGGDLLVKLWDLDNSQLIYTLAGHAAPVRDAAFSSDGRFILTASD---DGTVRLWDTES 179

Query: 424 N---GRNETLINTPAYASD 439
               G ++       +  D
Sbjct: 180 GRMLGGHQRRTRLLTFTPD 198



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 73/204 (35%), Gaps = 14/204 (6%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D   +      G         S+ +++      + + D D + + Y        + +  F
Sbjct: 97  DQAVRLTGHRNGVTAMAFSPASQRLLTAGGDLLVKLWDLDNSQLIYTLAGHAAPVRDAAF 156

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + +  A+ D      V L DT   R    +G  +       F+ + +R  +SV  D
Sbjct: 157 SSDGRFILTASDDG----TVRLWDTESGRM---LGGHQRRTRLLTFTPD-RRYALSVDTD 208

Query: 280 EAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           E   +   ++ +  T      +   I    +Y+P   ++   +D  G   + + ++    
Sbjct: 209 EPRLMRRWEVVTGKTVGYYQGHNKAI-TRMAYAPGGLRMA-TADAGGG--IILWEAQNQT 264

Query: 338 QKRISQDKEASYFDPVWSPQGDLI 361
              I +   A   + V+S  G ++
Sbjct: 265 PISILEGHTAPISELVFSQDGTML 288


>gi|332258688|ref|XP_003278425.1| PREDICTED: notchless protein homolog 1 isoform 2 [Nomascus
           leucogenys]
          Length = 443

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 45/334 (13%), Positives = 89/334 (26%), Gaps = 69/334 (20%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
           TG+ +  G     V F  WD+   KQ+ G+                       ++ E   
Sbjct: 125 TGKYLASGSGDTTVRF--WDLSTGKQV-GRTLAGHSKW------------ITGLSWEPLH 169

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            N    +V+ S   G ++    + D        +     Q +   R+  +        Y 
Sbjct: 170 ANPECRYVASSSKDGSVR----IWDTTAGRCERILTGHTQSVTCLRWGGDG-----LLYS 220

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN------------------------ 268
                 + +   R     + +      +     S++                        
Sbjct: 221 ASQDRTIKVWRARDGVLCRTLQGHGHWVNTMALSTDYALRTGAFEPAEASVNPQDLQGSL 280

Query: 269 -----------------GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                            G   L+S   D  + ++S         R+T    +     +SP
Sbjct: 281 QELKERALSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSP 340

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           DS  +   S     + + +            +   A+ +   WS    L+  +  S    
Sbjct: 341 DSRIVASASF---DKSIKLWDGRMGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTL 396

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +  +K       L      + A  WSP G+ + 
Sbjct: 397 KVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVA 430



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/154 (14%), Positives = 48/154 (31%), Gaps = 16/154 (10%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFI 303
           + R    +      +++  FS  GK    S   D  +  +  DL +       L      
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFW--DLSTGKQVGRTLAGHSKW 159

Query: 304 NISASY-----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
               S+     +P+   +   S ++G  +++   +     +RI      S     W   G
Sbjct: 160 ITGLSWEPLHANPECRYVA-SSSKDGSVRIW--DTTAGRCERILTGHTQSVTCLRWGGDG 216

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
             + ++        +   + DG   R L    + 
Sbjct: 217 --LLYSASQDRTIKVWRAR-DGVLCRTLQGHGHW 247



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 260 RTGAFEPAEASVNPQDLQGSLQELKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 316

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 317 AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 354

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 355 KLW--DGRMGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAM 408

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 409 DLPGHADEVYAVDWSPDGQRVA 430


>gi|258575943|ref|XP_002542153.1| hypothetical protein UREG_01669 [Uncinocarpus reesii 1704]
 gi|237902419|gb|EEP76820.1| hypothetical protein UREG_01669 [Uncinocarpus reesii 1704]
          Length = 778

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 38/100 (38%), Gaps = 23/100 (23%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            +++     +   + +D++       WSP+G++IA+ + +     + + K DG + ++  
Sbjct: 124 YHILDVKSGELTPLDRDQKGDVQYAAWSPKGNVIAYVRNN----NLFLWK-DGERTQITE 178

Query: 388 EDS---NLQAPTW---------------SPSGRSLIFSRK 409
           +         P W               SP G  L + R 
Sbjct: 179 DGGPNTFNGVPDWVYEEEIFGDRYALWFSPDGEYLAYMRT 218



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 43/113 (38%), Gaps = 24/113 (21%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +     D + +D++S     L      ++  A++SP  + I +         L++ +  
Sbjct: 116 YRHSFFADYHILDVKSGELTPLDRDQKGDVQYAAWSPKGNVIAYVR----NNNLFLWK-- 169

Query: 335 GSDQKRISQDKEASYFD--PVW---------------SPQGDLIAFTKFSGEK 370
             ++ +I++D   + F+  P W               SP G+ +A+ +     
Sbjct: 170 DGERTQITEDGGPNTFNGVPDWVYEEEIFGDRYALWFSPDGEYLAYMRTDETG 222



 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 80/244 (32%), Gaps = 35/244 (14%)

Query: 78  VFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            F L++ +S K K    D+           A  ++ G V         V  R+++    +
Sbjct: 260 QFRLLNVESAKGKTVAIDAFE---------ADNMIIGEVSWLTDGHDDVAVRVFNRVQDR 310

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD----FNSRILFVSESVVSGIIKNSL 193
           +   K    +  S R      +  + +    +         + +  V     +G  +  +
Sbjct: 311 E---KVVLVNAESGR------ASTVRERDGTDGWIDNLVAINYVGRVRGGRANGRERYYV 361

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSP----------NQQKVAY--ATYDDEDILRVYL 241
            + D DG    YL P+ +    +    P           ++++ Y  AT        VY 
Sbjct: 362 DISDMDGWAHLYLFPTGNGRPIQLTRGPWEVTAIHHIDTERQLVYFQATKHHSTERHVYS 421

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +     R    + +  +   +  FS+ G   +++    +       D++     R T T 
Sbjct: 422 VSYSNMRMRALVNDSEAGYYSASFSAQGGYYILNYHGPDVPYQELFDVKKGKAIR-TITS 480

Query: 302 FINI 305
            I++
Sbjct: 481 NIDV 484



 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 15/134 (11%), Positives = 35/134 (26%), Gaps = 30/134 (22%)

Query: 221 PNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           P+   V +AT     Y        +++D +         + +  +    +S  G      
Sbjct: 101 PDLSAVMWATNYKKQYRHSFFADYHILDVKSGELTPLDRDQKGDVQYAAWSPKGNVIAYV 160

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASY---------------SPDSSQIV 317
              +  +       +     ++T     N       +               SPD   + 
Sbjct: 161 RNNNLFLW------KDGERTQITEDGGPNTFNGVPDWVYEEEIFGDRYALWFSPDGEYLA 214

Query: 318 F-ESDREGKEQLYV 330
           +  +D  G     +
Sbjct: 215 YMRTDETGVPTFTI 228


>gi|198430657|ref|XP_002124017.1| PREDICTED: hypothetical protein [Ciona intestinalis]
          Length = 1393

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 100/334 (29%), Gaps = 53/334 (15%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS-- 159
            W  L     + G   K    R RV  +L+        I     S PA    + H  +  
Sbjct: 461 AWAFLK----LVGSNGKPNTGR-RVRLQLFHPPRNISAISMDAQSEPAFSWWLNHKRAAY 515

Query: 160 -DDIYQSITGEKGDFN----SRILFVSESVVSGIIKNSLC--VMDRDGANIRYLTPSRDQ 212
              IY ++    G        R +F  +          +   +   DG N        + 
Sbjct: 516 PSTIYVTLKSVTGSSKMDPVPRSMFAMQPECGAQTYKQMHNSLQFADGTN-------NED 568

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
              EP++S    ++   T    + + + L                    + RFS +G R 
Sbjct: 569 QQLEPKWS----RLPGQTCKIPNTVSLKLWAGTDG------------AFSIRFSKSGTRI 612

Query: 273 LISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            ++ +      I    +        L     +     +S DSS++V  S  +G  Q++  
Sbjct: 613 AVACKHGPIYPILLYSIPGGEEMGALVGHQQLVYDIQWSNDSSKLVSAS-ADGTAQVW-- 669

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
             N   +   +    +  +   + P    I  T   G    I V     S  ++L E   
Sbjct: 670 DLNDKSKSTHTLVHPSYVYTSSFHPTAQYIVAT--GGYDCVIRVWSIASSTTQMLQEL-- 725

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                    G   + +      +G  LYS D  G
Sbjct: 726 --------DGHKSLINSLVFDHSGLTLYSADSAG 751


>gi|120436189|ref|YP_861875.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
 gi|117578339|emb|CAL66808.1| OmpA/MotB family outer membrane protein [Gramella forsetii KT0803]
          Length = 620

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 34/150 (22%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDP--VWSPQGDLIAFTKFSG-----------EKFAIG 374
           +YV+     +   I  D      D   V SP G+ I FT+ +            +   + 
Sbjct: 190 IYVLDKASGNVSPIGGDVNTKLHDGPAVVSPDGNTIYFTRNNYLGNKEGKRDKEKTNHLK 249

Query: 375 VMKKDGSQ-----ERLLVEDSN---LQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLN- 424
           +     S       + LV +SN   +  P+ S  G++L F+    +G  G+ +Y + ++ 
Sbjct: 250 LYSATNSGNGWAEVKELVFNSNEYSVGHPSLSSDGKTLYFTSDMPNGFGGTDIYMVSVDE 309

Query: 425 ----GRNETL---INTPAYASDPQWVGFMD 447
               G  E L   +NT    + P    FMD
Sbjct: 310 NGNFGTPENLGEPVNTEFDETFP----FMD 335



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 38/232 (16%), Positives = 67/232 (28%), Gaps = 38/232 (16%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-PRF-SPNQQKVAYATYD------ 232
                +G     + V+D+   N+  +    +  L + P   SP+   + +   +      
Sbjct: 178 KTYSWNGEPFLDIYVLDKASGNVSPIGGDVNTKLHDGPAVVSPDGNTIYFTRNNYLGNKE 237

Query: 233 ---------DEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALISVQKD--- 279
                       +              + + N     +  P  SS+GK    +       
Sbjct: 238 GKRDKEKTNHLKLYSATNSGNGWAEVKELVFNSNEYSVGHPSLSSDGKTLYFTSDMPNGF 297

Query: 280 EAMDIYSVDLQ----SNATERLT---NTLFINISASYSPDSSQIVFESDRE---GKEQLY 329
              DIY V +         E L    NT F         D + + F S+     G   ++
Sbjct: 298 GGTDIYMVSVDENGNFGTPENLGEPVNTEFDETFPFMDTDGT-LYFSSNGHAGLGLFDIF 356

Query: 330 VMQSNGS----DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            M          +   S   + +YF    S +G  I+ T   G    I V  
Sbjct: 357 RMTEEDGIENLGEPVNSNMDDFAYFQVSDSKEG-YIS-TNREGGSDDIFVFN 406


>gi|68485178|ref|XP_713498.1| hypothetical protein CaO19.3873 [Candida albicans SC5314]
 gi|46434997|gb|EAK94389.1| hypothetical protein CaO19.3873 [Candida albicans SC5314]
          Length = 384

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 69/246 (28%), Gaps = 41/246 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    D+ +     SP+  K+   + D      V+       +    +          R+
Sbjct: 54  VLKDHDKTVTSVDISPDGSKILTCSQD--RNALVWEYANGEYKPTLVLLRINRAATVCRW 111

Query: 266 SSNGKR---------ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY------S 310
           S +G +           +   ++E     S  L+      +T    I+   +       S
Sbjct: 112 SPDGSKFAVGSSDRIIAVCYYEEENDWWVSKHLKKPLKSTITT---IDWHPNGVLLACGS 168

Query: 311 PDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVW------SPQGDLI 361
            D    VF    +G   K    V    G+     +   + +     W      SP G+ +
Sbjct: 169 TDGHVRVFSGYIKGIDAKPDPSVW---GTKLPFQTLCGDYTNETNAWIHGVKFSPDGNAL 225

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKL 418
           A+         +     +G   R +        P      +S+++   +    G     L
Sbjct: 226 AYVSHDSSVGFVYPQ-GEGLPPRAIFNVKTDNLPF-----KSVVWLNDQQVCAGGFTCNL 279

Query: 419 YSIDLN 424
                +
Sbjct: 280 VVFQGD 285


>gi|302759078|ref|XP_002962962.1| hypothetical protein SELMODRAFT_78836 [Selaginella moellendorffii]
 gi|300169823|gb|EFJ36425.1| hypothetical protein SELMODRAFT_78836 [Selaginella moellendorffii]
          Length = 666

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 60/193 (31%), Gaps = 21/193 (10%)

Query: 112 VTGRVIKEGKDRLRVEFR--LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           V   V + G     VE    ++     +++  +      +            + +   G 
Sbjct: 77  VRSTVHEYGGGAFTVEGETAVFSNFSDQRLYKQSLTGERSPVPLTP-AYEGPVVRYADGR 135

Query: 170 KGDFNSRILFVSESVVSG-------IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
                 R + V E   +G            +C      A    L    D   F PR SP+
Sbjct: 136 FDISRGRYITVREGTHNGFSIPWIFSRHLFICGYRWLSAEPEVLLSGNDFYSF-PRLSPD 194

Query: 223 QQKVAYATYDDEDIL----RVYLMDTRIDRAPKRIGNFRSMILA------PRFSSNGKRA 272
            +K+A+  +   ++      +Y+ D   D    +         A      P++S  G+  
Sbjct: 195 GRKLAWIEWSHPNMPWDSTYLYVGDIGKDGKITKRVCVAGNDGAKEAVTEPKWSPEGELF 254

Query: 273 LISVQKDEAMDIY 285
            +S +     ++Y
Sbjct: 255 FVSDRGRGFWNLY 267



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 23/170 (13%), Positives = 48/170 (28%), Gaps = 25/170 (14%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQ-----KDEAMDIYSVDL-QSNATERLTNT 300
              P+ + +       PR S +G++             ++  +Y  D+ +     +    
Sbjct: 173 SAEPEVLLSGNDFYSFPRLSPDGRKLAWIEWSHPNMPWDSTYLYVGDIGKDGKITKRVCV 232

Query: 301 LFIN------ISASYSPDSSQIVFESDRE-GKEQLYVM-----------QSNGSDQKRIS 342
              +          +SP+     F SDR  G   LY               +    +   
Sbjct: 233 AGNDGAKEAVTEPKWSPEGELF-FVSDRGRGFWNLYHWVESENKCEPMYPLDAEFTRPAW 291

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
               +SY     S    +I   ++      + ++    S+    VE    
Sbjct: 292 IFGNSSYGFFNSSLGTRIICTYRWERGNSRLAIVDISPSRSIYPVETPFD 341



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 30/197 (15%), Positives = 62/197 (31%), Gaps = 34/197 (17%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           V+KD    +  +           +T+      +++ +    VF +  +  ++LY     G
Sbjct: 59  VKKDGNGRVEDITPSGFNVR---STVHEYGGGAFTVEGETAVFSNFSD--QRLYKQSLTG 113

Query: 336 S-DQKRISQDKEA-----SYFDPVWSPQGDLIAFTKFSGEKFAI-GVMK----------K 378
                 ++   E      +      S +G  I   + +   F+I  +             
Sbjct: 114 ERSPVPLTPAYEGPVVRYADGRFDIS-RGRYITVREGTHNGFSIPWIFSRHLFICGYRWL 172

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT---GSKLYSIDL--NGRNETLINT 433
               E LL  +     P  SP GR L +      +     + LY  D+  +G+    +  
Sbjct: 173 SAEPEVLLSGNDFYSFPRLSPDGRKLAWIEWSHPNMPWDSTYLYVGDIGKDGKITKRVCV 232

Query: 434 PAY------ASDPQWVG 444
                     ++P+W  
Sbjct: 233 AGNDGAKEAVTEPKWSP 249


>gi|255636878|gb|ACU18772.1| unknown [Glycine max]
          Length = 376

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/231 (17%), Positives = 79/231 (34%), Gaps = 41/231 (17%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+Q  VA    ++E  + +Y +          +     +I    +S+   R + +  
Sbjct: 17  AWSPDQSMVALCPNNNE--VHIYRLVEDKWEKLYVLQKHDQVISGIDWSARSNRIV-TAS 73

Query: 278 KDEAMDIYSVDLQSNATER-----LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            D    ++  +L+ +           N   + +   +SP  ++    S   G + + +  
Sbjct: 74  HDRNSYVW--NLEGSEWVPTLVILRPNRAALCVQ--WSPKENKFAVGS---GAKTVCICY 126

Query: 333 SNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKD------- 379
               +     K I +  ++S     W P   L+A T   G    F+  +   D       
Sbjct: 127 YEQENNWWVSKLIRKRHDSSVTSVSWHPDNILLATTSTDGKCRVFSTFIKGVDARDSKKG 186

Query: 380 -------GSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                  G Q   L +  S      WSPSG +L +         S +Y +D
Sbjct: 187 TSPDSKFGEQIVQLDLSSSWTFGVKWSPSGNTLAYV-----GHNSMIYFVD 232


>gi|242241405|ref|YP_002989586.1| Curli production assembly/transport component CsgG [Dickeya
           dadantii Ech703]
 gi|242133462|gb|ACS87764.1| Curli production assembly/transport component CsgG [Dickeya
           dadantii Ech703]
          Length = 223

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 48/129 (37%), Gaps = 21/129 (16%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPV-----SIAFTKFV------- 56
           +N K+  C +++        +  +   V T       +P       I+  KF        
Sbjct: 1   MNKKVVFCSMVIAATLLGGCATESSRTVETPKVASYSTPYQGVRSPISVGKFENRSNYMN 60

Query: 57  -----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVL 111
                 +D LG +   ++   LQ++  FN++ + +  +  T      + Q     GA  +
Sbjct: 61  GIFSDGVDRLGNQAKTILVSHLQQTGRFNVLDRTNMDELKTEAGIKGQTQ--TLKGANYV 118

Query: 112 VTGRVIKEG 120
           VTG V + G
Sbjct: 119 VTGDVTEFG 127


>gi|149409206|ref|XP_001513573.1| PREDICTED: similar to eukaryotic translation initiation factor
           [Ornithorhynchus anatinus]
          Length = 692

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 167 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 218

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 219 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 264

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 265 YLVTFSPLMDTQDDPQAIIIWDILTGQKKRGFHCESSAHWPIFKWSHDGKF--FARMTVD 322

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 323 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 382

Query: 430 LI 431
            +
Sbjct: 383 RV 384



 Score = 43.9 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 15/200 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 349 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 408

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +            +I+ +  +    + +     I I+ ++ P+ S+  F        ++
Sbjct: 409 DRTPKGTQGVVTNFEIFRMREKQVPVDVVEMKESI-IAFAWEPNGSK--FAVLHGETPRI 465

Query: 329 YVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            V      N    + I    +       WSPQG  +          A+  +         
Sbjct: 466 SVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDCTMMN 525

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
           + E        W P+GR ++
Sbjct: 526 IAEHYMASDVEWDPTGRYVV 545


>gi|7144648|gb|AAF37321.1|AF141383_1 oxidized protein hydrolase [Homo sapiens]
          Length = 732

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 31/222 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEP 217
           D+I +    ++     + +F  +   + + K+   LCV+D +  NI  L    + +    
Sbjct: 189 DEIARLKKPDQAIKGDQFVFYEDWGENMVSKSIPVLCVLDVESGNISVLEGVPENVSPGQ 248

Query: 218 R-FSPNQQKVAYATYDDEDIL----------RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             ++P    V +  +  E                     I    + + +    + +PR S
Sbjct: 249 AFWAPGDAGVVFVGWWHEPFRLGIRFCTNRRSALYYVDLIGGKCELLSDDSLAVSSPRLS 308

Query: 267 SNGKRALI----SVQKDEA-MDIYSVDLQSNA--------TERLT-NTLFINIS----AS 308
            +  R +     S+        +   D  +            +L  N   I  S      
Sbjct: 309 PDQCRIVYLQYPSLIPHHQCSQLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGC 368

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +S DS ++VF+S +  ++ L+ + +       ++       +
Sbjct: 369 WSADSQRVVFDSAQRSRQDLFAVDTQVGTVTSLTVGGSGGSW 410


>gi|332306287|ref|YP_004434138.1| peptidase S9B dipeptidylpeptidase IV domain protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
 gi|332173616|gb|AEE22870.1| peptidase S9B dipeptidylpeptidase IV domain protein [Glaciecola
           agarilytica 4H-3-7+YE-5]
          Length = 840

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 44/271 (16%), Positives = 98/271 (36%), Gaps = 21/271 (7%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           DD+  +   E G   S+ +       +  + + L ++D        L+         P F
Sbjct: 296 DDLMPAYISEDGRIESKGV-RQRVADAKPVNHDLWLLDLTSHKKYSLSYH-----ALPGF 349

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           + +   +A    ++ +         R+ R    + ++     A  +  NG++  + ++  
Sbjct: 350 NDDV--LAEVKRENANAKGTTYQTNRLPRDIVLMRDWSWDQSAIEWHENGEQVAVMLEAW 407

Query: 280 EAMDIY--SVDLQSNAT---ERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVM 331
           +  D +  +VDLQ +      RL +  +IN   +   +  ++ Q+ + S+  G   LY+ 
Sbjct: 408 DNKDRWLATVDLQQHRLVNQHRLHDDAWINYRFNSYGWLHNTEQLYYLSEESGYAHLYIK 467

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVED 389
             NG+     S   E +  +   S   + I +         + I  +     +   L + 
Sbjct: 468 ALNGNASALTSGRFEVN--NLTLSKNDEYIYYQANQKHPGIYEIYRVNIASKEIEALTDL 525

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           + +   T SP    L+        +  +LY 
Sbjct: 526 NGMTDYTLSPDESKLL-LTHSTLTSPPELYV 555



 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 86/271 (31%), Gaps = 52/271 (19%)

Query: 199 DGANIRYL--TPSRDQILFEPRF---------SPNQQKVAYATYDDEDILRVYLMDTRID 247
           DG N  +   T + +QI+ +P +           +  +  + +  ++     +L      
Sbjct: 51  DGQNQTHTDGTLTLEQIMADPDWIGRQPLSSYWGDNSESVFYSQKEKGSPLTHLWQVDSQ 110

Query: 248 RAPKRIGNFRSMILAPRFS-----SNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTL 301
            A +      S + A  +S       G  +    +    + + ++     NA  ++T   
Sbjct: 111 NASEAQQVALSKLHAVSYSDSVTNPQGTYSAWVFE--GNIFVKALSGAGPNALRQITQDG 168

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ---- 357
                  +  D         R G     V  ++G  QK +S +   +             
Sbjct: 169 GEPKQLKFLNDGRLTY----RRGNRIFSVDLNSGFSQKLVSWEFSDAPEANAKPADYVAE 224

Query: 358 --GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--------------TWSPSG 401
              +LI +         +       +Q+++L   +N  AP              + SP+G
Sbjct: 225 QQIELIDYVAKKRNDRQLKF-----NQQKVLARQNNTLAPEAFYFSKDDQWVESSISPNG 279

Query: 402 RSLIFSRK--KDGDTGSKLYS--IDLNGRNE 428
           + L+ + +  +       L    I  +GR E
Sbjct: 280 KWLLIATREMQPSRGEDDLMPAYISEDGRIE 310



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 13/148 (8%), Positives = 46/148 (31%), Gaps = 9/148 (6%)

Query: 297 LTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-------EAS 348
           L      + SA  +  +  Q+    +    +  ++   +    + ++Q +          
Sbjct: 380 LMRDWSWDQSAIEWHENGEQVAVMLEAWDNKDRWLATVDLQQHRLVNQHRLHDDAWINYR 439

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
           +    W    + + +         + +   +G+   L      +   T S +   + +  
Sbjct: 440 FNSYGWLHNTEQLYYLSEESGYAHLYIKALNGNASALTSGRFEVNNLTLSKNDEYIYYQA 499

Query: 409 KKDGDTGSKLYSIDLNGRN-ETLINTPA 435
            +      ++Y +++  +  E L +   
Sbjct: 500 NQKHPGIYEIYRVNIASKEIEALTDLNG 527


>gi|218533257|ref|YP_002424072.1| 40-residue YVTN family beta-propeller repeat protein
           [Methylobacterium chloromethanicum CM4]
 gi|218525560|gb|ACK86144.1| 40-residue YVTN family beta-propeller repeat protein
           [Methylobacterium chloromethanicum CM4]
          Length = 479

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 67/189 (35%), Gaps = 10/189 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+ ++V + +   ED + +    T  +     + N   M +   FS +G+ A +    
Sbjct: 131 FTPDGREV-WVSVRGEDYVAILDAGTGRESGRITVPNGPGMTI---FSPDGRLAYVCSS- 185

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
             + +  ++D+Q      R+          + +PD  Q+ F     G+ Q++        
Sbjct: 186 -FSPETVAIDVQRRQIVGRIKQESPFCPDIAATPDGKQVWFTLKDVGRVQVFEAIPPFKP 244

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            K I      ++ +   +  G   A+    G    + V + D       +    L    W
Sbjct: 245 LKTIETGPITNHVNIARAKAGQF-AYVTV-GGLNEVKVFRTDDFSAVATIPTGALPHGLW 302

Query: 398 -SPSGRSLI 405
            S  G  + 
Sbjct: 303 PSGDGARIY 311



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 57/161 (35%), Gaps = 18/161 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+++ +   +     I  +    T   R    +G          F+ +G+   +SV+ 
Sbjct: 89  FSPDRKTLVAVSIGSNSISFIDT-ATNTVRHTTYVGRSPHEAF---FTPDGREVWVSVR- 143

Query: 279 DEAMDIYSVDLQSNATE-RLT--NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                +  +D  +     R+T  N   + I   +SPD       S          +  + 
Sbjct: 144 -GEDYVAILDAGTGRESGRITVPNGPGMTI---FSPDGRLAYVCS----SFSPETVAIDV 195

Query: 336 SDQKRISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAIG 374
             ++ + + K+ S F P    +P G  + FT     +  + 
Sbjct: 196 QRRQIVGRIKQESPFCPDIAATPDGKQVWFTLKDVGRVQVF 236



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 55/167 (32%), Gaps = 20/167 (11%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLTNTLFINISAS-- 308
           G       AP     G R         +  I  +D  +N      RL +T   N+S    
Sbjct: 21  GQAPGPASAPDV-PVGPRDRFYTSDQFSNTISVIDPAANKLLGVIRLGDTTPANLSPLYR 79

Query: 309 ---------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                    +SPD   +V  S   G   +  + +  +  +  +    + +    ++P G 
Sbjct: 80  GQLLVHGMGFSPDRKTLVAVSI--GSNSISFIDTATNTVRHTTYVGRSPHEAF-FTPDGR 136

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
            + +    GE +   +    G +   +   +      +SP GR L +
Sbjct: 137 EV-WVSVRGEDYVAILDAGTGRESGRITVPNGPGMTIFSPDGR-LAY 181


>gi|157374811|ref|YP_001473411.1| hypothetical protein Ssed_1672 [Shewanella sediminis HAW-EB3]
 gi|157317185|gb|ABV36283.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
          Length = 691

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 59/173 (34%), Gaps = 40/173 (23%)

Query: 310 SPDSSQIVFES--------DREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           SPD   + F          D++G    +LY++   G ++  I+   E +     WS  G 
Sbjct: 46  SPDGDSVAFTRSVPRKLYQDKDGLNWGELYIVDDKGVERPYIT--GEVNIKQIQWSKDGT 103

Query: 360 LIAFTKFSGEK--FAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSR------- 408
           LI F    G+     +  +  DG Q    + ++ +++   + S   + +           
Sbjct: 104 LIYFLAKMGDDEFVTLYQIPFDGGQALKTMALDGTDIGHFSLSEDNKQIALLAMPAKEKS 163

Query: 409 -------------KKDGDTGSKLYSIDLNGRNETLINTP----AYASDPQWVG 444
                         ++     +L+ +DL   ++ L         Y SD  W  
Sbjct: 164 EKKLKELGFKAEIYEENLKNKQLFVVDLAVTDKPLKPIAWEIEDYVSDMHWSP 216



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 32/110 (29%), Gaps = 13/110 (11%)

Query: 265 FSSNGKRALISVQ--------KDEAMD--IYSVDLQSNATERLTNTLFINISASYSPDSS 314
            S +G     +          KD      +Y VD +      +T  + I     +S D +
Sbjct: 45  VSPDGDSVAFTRSVPRKLYQDKDGLNWGELYIVDDKGVERPYITGEVNIK-QIQWSKDGT 103

Query: 315 QIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            I F +     E   LY +  +G    +              S     IA
Sbjct: 104 LIYFLAKMGDDEFVTLYQIPFDGGQALKTMALDGTDIGHFSLSEDNKQIA 153


>gi|58269598|ref|XP_571955.1| pre-mRNA splicing factor [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57228191|gb|AAW44648.1| pre-mRNA splicing factor, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 615

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 85/271 (31%), Gaps = 36/271 (13%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  L  +  +G N         Q + +  F+ +  K   A+YD      + L DT   +
Sbjct: 347 TKVKLWDVYNEG-NCLRTFLGHSQAVKDIAFNNSGDKFLSASYDK----HIKLWDTETGK 401

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINIS 306
             +   N +   +  +F+ +G +  I +   +   I   DL+     + T    L    +
Sbjct: 402 CIQAFTNGKIPNV-VKFNPDGDKQNIFMAGMQDKKIIQYDLREREIVQ-TYDQHLGPVNT 459

Query: 307 ASYSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            ++  ++ + V  SD    R     + V+       K I++    S       P     A
Sbjct: 460 ITFVDENRRFVTTSDDKTIRGWDYDIPVV------IKYIAEPYMHSMPAVTLHPSKRYFA 513

Query: 363 FTKFSGEKFAIGVMKKDGSQERLL-------VEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                     I V   DGS  +                   +SP G+ +       G   
Sbjct: 514 CQSLDN---QILVYSADGSFRQNKKKRFAGHTIAGYACNIGFSPDGKYI-----SSGTGS 565

Query: 416 SKLYSIDL-NGRNETLINTPAYAS-DPQWVG 444
            ++   D  NG+    +        D  W+ 
Sbjct: 566 GEMVFWDWKNGKIMKRLKAHKEVVIDHAWLP 596


>gi|23271707|gb|AAH23767.1| Eif3b protein [Mus musculus]
 gi|29835226|gb|AAH51065.1| Eif3b protein [Mus musculus]
          Length = 970

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 278 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 329

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 330 -----RWSPKGTYLATFHQRGIALWGGDKFKQIQRFSHQGVQLID---------FSPCER 375

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 376 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 433

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 434 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 493

Query: 430 LI 431
            +
Sbjct: 494 RV 495



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 460 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 519

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 520 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 572

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      +    + I    +       WSPQG  +          A+  +     
Sbjct: 573 APRISVSFYHVKSNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 632

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 633 TVMNIAEHYMASDVEWDPTGRYVV 656



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 15/138 (10%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   ++FES     ++  +  ++  D   I +    +     WSP+G  +A     G   
Sbjct: 293 DQYSVIFES----GDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRG--- 345

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGRN 427
            I +   D  ++        +Q   +SP  R L+        +D      ++ I L G  
Sbjct: 346 -IALWGGDKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDI-LTGHK 403

Query: 428 ETLINTPAYASDP--QWV 443
           +   +  + A  P  +W 
Sbjct: 404 KRGFHCESSAHWPIFKWS 421


>gi|148224247|ref|NP_001089991.1| WD repeat domain 8 [Xenopus laevis]
 gi|58701925|gb|AAH90211.1| MGC85022 protein [Xenopus laevis]
          Length = 451

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/196 (13%), Positives = 73/196 (37%), Gaps = 15/196 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S +             +++V+ ++        +I    + +++  +S + +  L + + 
Sbjct: 56  WSSD-SMFILCAMYKRGLVQVWSLEQPDWHC--KIDEGSAGLVSSCWSPDARHILNTTEF 112

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++S+  +S     +          +++ D   +     R+ K+ + +   N    
Sbjct: 113 HLRITLWSLSAKS--VSYIKYPKACQQGIAFTQDGRHMALAERRDCKDYISIFVCNDWRL 170

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE------DSNL 392
            R  + +       VW+P G ++A    +  ++ + +   DG   RLL           +
Sbjct: 171 LRHFETETQDLAGIVWAPNGCVLA-VWDTCLEYKVLLYSLDG---RLLSSYCAYEWSLGI 226

Query: 393 QAPTWSPSGRSLIFSR 408
           ++  WSP+ + L    
Sbjct: 227 KSVAWSPTSQFLAIGS 242


>gi|332709571|ref|ZP_08429531.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
 gi|332351604|gb|EGJ31184.1| WD-40 repeat-containing protein [Lyngbya majuscula 3L]
          Length = 1469

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 20/171 (11%)

Query: 266  SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
            SSNG++   S+  D+ + ++    ++   E L        S S SPDS Q+    + +G 
Sbjct: 1143 SSNGRKIA-SIGDDKTIRLWE--TENKQVEELIPIEGKFKSLSISPDSKQLAAVKE-DGS 1198

Query: 326  EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
              L  + +N +  ++            ++SP    +A          I ++  +G +   
Sbjct: 1199 VHLLDLNANNNKWEQ--FADIQGISQIIFSPDRKQLAAVDKDNT---ISLLDLNGKE--- 1250

Query: 386  LVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            L      + P     +SP  + L      DG     ++ +DLN +N   + 
Sbjct: 1251 LYPPRKFKKPISQLIFSPDSKRLAVIENDDG----IIHLLDLNKKNWKTLP 1297



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 60/169 (35%), Gaps = 18/169 (10%)

Query: 265  FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            FS +GK+ +    KD    IY  DL  N  + L        S S++  +  +V  ++   
Sbjct: 964  FSPDGKKLV--AYKDRTSTIYLWDLTGNEPKLLKKDQDNFSSISFNSKNQLVVAVANES- 1020

Query: 325  KEQLYVMQSNGSDQKRISQDKEASY-------FDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
               L +       Q    +D    Y        + V+SP G  +A   +  +     V+ 
Sbjct: 1021 DYTLRLSDFVSGSQLAEFKDFYGCYSCESQLFGNLVFSPDGTYLA-AAYGTDNSIAYVVS 1079

Query: 378  KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-DLNG 425
             D          S   + ++  + R +I      G   + + S+ D +G
Sbjct: 1080 LDHESWESFKPLSRAASISFDANSRLII------GQQNNGIISVHDSSG 1122



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 55/307 (17%), Positives = 105/307 (34%), Gaps = 73/307 (23%)

Query: 113  TGRVIKEGKDRLRVEF------RLWDVKDRKQ-----IIGK--KFFSSPASWRKIA---- 155
             G VI     R           RLW+ ++++      I GK      SP S +  A    
Sbjct: 1137 IGEVISSSNGRKIASIGDDKTIRLWETENKQVEELIPIEGKFKSLSISPDSKQLAAVKED 1196

Query: 156  ---HTIS----DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
               H +     ++ ++     +G   S+I+F  +       +  L  +D+D  N   L  
Sbjct: 1197 GSVHLLDLNANNNKWEQFADIQGI--SQIIFSPD-------RKQLAAVDKD--NTISLLD 1245

Query: 209  SRDQILFEPR----------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
               + L+ PR          FSP+ +++A    DD  I  + L        P ++     
Sbjct: 1246 LNGKELYPPRKFKKPISQLIFSPDSKRLAVIENDDGIIHLLDLNKKNWKTLPFKLPLRI- 1304

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSV---------DLQSNATERLTNTLFINISASY 309
                  FSS+G+  ++ +  DE +D  ++         +L S     L        +  +
Sbjct: 1305 -----AFSSDGRLLVVDLLDDEHVDKPTIVLKELKPGNELDSGKE--LVRFKGAE-NPRF 1356

Query: 310  SPD-------SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            + +        + +   +D +    ++V   +G         ++        S  G LIA
Sbjct: 1357 NKNSIVLNTQGNLLAAIADSD---YIHVWDISGKLLTAFKGQQKNKLTSISQSADGSLIA 1413

Query: 363  FTKFSGE 369
                +G 
Sbjct: 1414 TLDQNGT 1420


>gi|298248118|ref|ZP_06971923.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297550777|gb|EFH84643.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 1269

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 65/223 (29%), Gaps = 14/223 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    ++ + +        +       +     S + + +   + D      + L +T
Sbjct: 525 VSGSWDKTIRLWETSSGRCVRIFYGHTAPVESVSLSGDGRWLVSGSNDK----TIRLWET 580

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              R  +      S + +   S +G+  + S      + +  +                 
Sbjct: 581 SSGRCVRTFYGHTSDVRSVNLSGDGRWLV-SGSDKGTIPLREIS-SWRCVRTFYGHTSSV 638

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +S S S D   +   S       + + + N      I +   +       S  G  +   
Sbjct: 639 VSVSLSDDGHWLASGSK---DNTVRLWEVNSGRCVHIFKGHTSDVTSVSLSRDGRWLVSG 695

Query: 365 KFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
                   I + +    +         S++++ + S  GR L+
Sbjct: 696 SQDQT---IRLWEVGSGRCIRTFYGHTSDVRSVSLSGDGRWLV 735



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 73/259 (28%), Gaps = 38/259 (14%)

Query: 115 RVIKEGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
            V   G  R  V        RLW+    + +  + F+   +  R +              
Sbjct: 556 SVSLSGDGRWLVSGSNDKTIRLWETSSGRCV--RTFYGHTSDVRSV-------------N 600

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             GD           +VSG  K ++ + +                +     S +   +A 
Sbjct: 601 LSGDG--------RWLVSGSDKGTIPLREISSWRCVRTFYGHTSSVVSVSLSDDGHWLAS 652

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D+     V L +    R         S + +   S +G+  + S  +D+ + ++ V 
Sbjct: 653 GSKDN----TVRLWEVNSGRCVHIFKGHTSDVTSVSLSRDGRWLV-SGSQDQTIRLWEV- 706

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                            S S S D   +V  SD      + + + +     R  +    S
Sbjct: 707 GSGRCIRTFYGHTSDVRSVSLSGDGRWLVSGSD---NNTVRLREVSSWRCVRTFEGHTDS 763

Query: 349 YFDPVWSPQGDLIAFTKFS 367
                 S  G  +      
Sbjct: 764 VASVSLSRDGHWLVSGSQD 782


>gi|229163849|ref|ZP_04291791.1| hypothetical protein bcere0009_46140 [Bacillus cereus R309803]
 gi|228619621|gb|EEK76505.1| hypothetical protein bcere0009_46140 [Bacillus cereus R309803]
          Length = 356

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 74/224 (33%), Gaps = 34/224 (15%)

Query: 214 LFEPRFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           ++ P++S + + + Y   D+   +  L +Y    +I+  P      R +    ++S N  
Sbjct: 1   MYSPKWSYDGRFIGYIDGDETGKKSNLFIYDTKEKINYQP----YVRVLTSDFKWSPNKN 56

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------EG 324
           +   +    +   +    +++   +   N         + P+  + +  S         G
Sbjct: 57  QLAYT----DQGLLNVTKIKNGRPQGFENVSLGVSDFEWFPNGKEFIVSSQSCLRPTGWG 112

Query: 325 KEQLYVMQSNG-----------SDQKRISQDKEASYFDPVWSPQGDLIAF-----TKFSG 368
           K  LY +  +            + Q   +     +     WS  G  I+F        + 
Sbjct: 113 KVPLYKIPVDANLTKDKIKPFYTIQTNETDLFAINANYFKWSSDGKWISFLASPTASLAM 172

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKD 411
           +   + V+   G   R +    + +    W+PS   L +   + 
Sbjct: 173 DSNTLCVISSKGKHFRKIGNMLSFKDWMKWAPSANQLTYISGEG 216


>gi|293332435|ref|NP_001168627.1| hypothetical protein LOC100382413 [Zea mays]
 gi|223949659|gb|ACN28913.1| unknown [Zea mays]
          Length = 609

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 46/255 (18%), Positives = 89/255 (34%), Gaps = 51/255 (20%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAP 263
           ++ P         RFSPN + VA  + D    +RV+     R  +A  R  + R   L  
Sbjct: 51  WVYPDHAYPTTVARFSPNGEWVA--SADASGCVRVWGRYGDRALKAEFRPLSGRVDDL-- 106

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNAT---------ERLTNTL-----------FI 303
           R+S +G R ++S        + +    S +T           L+                
Sbjct: 107 RWSPDGLRIVVSGDGKGKSFVRAFVWDSGSTVGEFDGHSKRVLSCDFKPTRPFRIVTCGE 166

Query: 304 NISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           +  A++  +     F  S R+    +  ++      K I+            S     + 
Sbjct: 167 DFLANFY-EGPPFKFKHSIRDHSNFVNCIRYAPDGSKFIT-----------VSSDKKGLI 214

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI- 421
           +   +GEK  IG +  +G          ++ A +W+P  + ++       D  +K++ I 
Sbjct: 215 YDGKTGEK--IGELSTEGG------HTGSIYAVSWNPDSKQVL---TVSADKSAKVWDIF 263

Query: 422 -DLNGRNETLINTPA 435
            D +G+    +  P 
Sbjct: 264 EDASGKLNRTLVCPG 278



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 45/104 (43%), Gaps = 7/104 (6%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S+S SPD ++ V    ++GK ++Y +  +   ++ + +    +     +SP   +  F 
Sbjct: 452 TSSSVSPDGTEAV-VGAQDGKLRIYSISGDTLTEEALLEKHRGAITSIHYSPD--VSMFA 508

Query: 365 KFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLI 405
                + A+ V  +   + +L   L   + + +  WSP  R + 
Sbjct: 509 SADANREAV-VWDRASREIKLKNMLYHTARINSLAWSPDSRLVA 551



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 35/110 (31%), Gaps = 6/110 (5%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVF 318
           I +   S +G  A++  Q D  + IYS+   +      L        S  YSPD S    
Sbjct: 451 ITSSSVSPDGTEAVVGAQ-DGKLRIYSISGDTLTEEALLEKHRGAITSIHYSPDVSMFA- 508

Query: 319 ESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFS 367
               +   +  V      + K        A      WSP   L+A     
Sbjct: 509 --SADANREAVVWDRASREIKLKNMLYHTARINSLAWSPDSRLVATGSLD 556



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 42/123 (34%), Gaps = 8/123 (6%)

Query: 201 ANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            N + ++ ++ +  +     SP+  +      D +  LR+Y +          +   R  
Sbjct: 437 HNSKVISTTKVNYTITSSSVSPDGTEAVVGAQDGK--LRIYSISGDTLTEEALLEKHRGA 494

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISASYSPDSSQIV 317
           I +  +S +     +    D   +    D  S     + +        S ++SPDS  + 
Sbjct: 495 ITSIHYSPD---VSMFASADANREAVVWDRASREIKLKNMLYHTARINSLAWSPDSRLVA 551

Query: 318 FES 320
             S
Sbjct: 552 TGS 554


>gi|290543452|ref|NP_001166577.1| WD repeat-containing protein 1 [Cavia porcellus]
 gi|20269306|dbj|BAB91015.1| WD repeat1 protein [Cavia porcellus]
          Length = 606

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 69/244 (28%), Gaps = 55/244 (22%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   +++P+   VA  + D    LR++    R          F   I    +
Sbjct: 53  IYTEHAHQVVVAKYAPSGFYVA--SGDISGKLRIWDTTQREHLLKYEYQPFAGKIKDIAW 110

Query: 266 SSNGKRALISVQK--------------------DEAMDIYSVDLQSNATERLTNTLFINI 305
           + + KR  +  +                          I SVD++     RL      N 
Sbjct: 111 TEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQTRPYRLATGSDDNC 170

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           +A +             EG    +              D         +SP G+  A   
Sbjct: 171 AAFF-------------EGPPFKFKFTIG---------DHGRFVNCVRFSPDGNRFATAS 208

Query: 366 FSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             G    I +      ++          D  + A +WSP    L+      GD  SK++ 
Sbjct: 209 ADG---QIFIYDGKTGEKICALGGSKAHDGGIYAISWSPDSTHLL---SASGDKSSKIWD 262

Query: 421 IDLN 424
           +  N
Sbjct: 263 VGAN 266


>gi|332027745|gb|EGI67812.1| Guanine nucleotide-binding protein subunit beta-2 [Acromyrmex
           echinatior]
          Length = 346

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/221 (12%), Positives = 75/221 (33%), Gaps = 16/221 (7%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S  I + + G +G  +S      + +++G     +C+ D +         +    +    
Sbjct: 138 SAKIVRELLGYEGFLSSCRFLDDKKIITGSGDMKICIWDLEANKKTTDFEAHSGDVVSIS 197

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+       + D        L D R ++A +      + + +  +  +G +  ++  +
Sbjct: 198 LSPDGNTYVTGSVDK----TCKLWDLREEKAKQTFFGHEADVNSVCYHPSG-QGFVTASE 252

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDS----SQIVFESDREGKEQLYVMQSN 334
           D+   ++       + ++LT     N +  ++        + +F    +    +++  + 
Sbjct: 253 DKTARLW----DFRSDQQLTTFKPPNSNPGFTSCGLSLSGRFIFCGSDD--NSIHIWDTL 306

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            +    I    E        S  G  +A   +  +   I V
Sbjct: 307 KNQHNGILSGHENRVTSLCVSGNGMAVASCSWD-QNVRIWV 346


>gi|212693547|ref|ZP_03301675.1| hypothetical protein BACDOR_03064 [Bacteroides dorei DSM 17855]
 gi|237708705|ref|ZP_04539186.1| dipeptidyl peptidase IV [Bacteroides sp. 9_1_42FAA]
 gi|237724154|ref|ZP_04554635.1| dipeptidyl peptidase IV [Bacteroides sp. D4]
 gi|212663800|gb|EEB24374.1| hypothetical protein BACDOR_03064 [Bacteroides dorei DSM 17855]
 gi|229437342|gb|EEO47419.1| dipeptidyl peptidase IV [Bacteroides dorei 5_1_36/D4]
 gi|229457131|gb|EEO62852.1| dipeptidyl peptidase IV [Bacteroides sp. 9_1_42FAA]
          Length = 733

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 23/147 (15%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------ 363
           S D  +I+  S + GKE   +   N +    I      S+ D + SP   LI        
Sbjct: 53  STDGKKIMQYSFKTGKETGTIFDVNTARDCSIK-----SFDDYIMSPDEKLILIQTDTKP 107

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID- 422
                      +     ++   L E+   Q P +SP G  + F R       + +Y +  
Sbjct: 108 IYRRSFTANYYIFNVKNNKMEPLSENGPQQVPLFSPDGNQIAFVRD------NNIYLVKL 161

Query: 423 LNGRNETLINTPAYASD-----PQWVG 444
           L G +E+ +      ++     P WV 
Sbjct: 162 LFGNSESQVTKDGKFNEVLNGIPDWVY 188



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 66/179 (36%), Gaps = 35/179 (19%)

Query: 220 SPNQQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---- 274
           S + +K+  Y+    ++   ++ ++T  D + K   +F   I+    S + K  LI    
Sbjct: 53  STDGKKIMQYSFKTGKETGTIFDVNTARDCSIK---SFDDYIM----SPDEKLILIQTDT 105

Query: 275 --SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               ++    + Y  ++++N  E L +         +SPD +QI F  D        V  
Sbjct: 106 KPIYRRSFTANYYIFNVKNNKMEPL-SENGPQQVPLFSPDGNQIAFVRD---NNIYLVKL 161

Query: 333 SNGSDQKRISQDK-----------------EASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             G+ + ++++D                          +S    ++A+ +F   +  + 
Sbjct: 162 LFGNSESQVTKDGKFNEVLNGIPDWVYEEEFGFNRAFDFSADSQMLAYIRFDESQVPMY 220



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 60/169 (35%), Gaps = 36/169 (21%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD---- 321
           S++GK+ +    K         D+ +      +   F +     SPD   I+ ++D    
Sbjct: 53  STDGKKIMQYSFKTGKETGTIFDVNT--ARDCSIKSFDDY--IMSPDEKLILIQTDTKPI 108

Query: 322 --REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             R      Y+     +  + +S++       P++SP G+ IAF + +     I ++K  
Sbjct: 109 YRRSFTANYYIFNVKNNKMEPLSENGPQQV--PLFSPDGNQIAFVRDN----NIYLVKLL 162

Query: 380 -GSQERLLVEDSNLQA-----PTW--------------SPSGRSLIFSR 408
            G+ E  + +D          P W              S   + L + R
Sbjct: 163 FGNSESQVTKDGKFNEVLNGIPDWVYEEEFGFNRAFDFSADSQMLAYIR 211



 Score = 40.0 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 81/233 (34%), Gaps = 8/233 (3%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y+      G  NS++   +  + S + +     +D DG   R      +  L     + +
Sbjct: 242 YEYKYPMPGIDNSKVTVHTFDIKSKVTRKMDLPLDADGYIPRIKFTDDENALAIMTLNRH 301

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           Q +      +    L   ++     +  K    + +++  P      K  ++  +KD   
Sbjct: 302 QNRFDLYFANPRSTLCKLMVRDEAPQYIKEEA-YSNIVFYP------KNFVVMSEKDGYN 354

Query: 283 DIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            +Y      N  ++LT   F +     +   ++   FES+     +  + + +G  +K  
Sbjct: 355 HLYLYTSGGNLVKQLTKGNFEVKDFLGWDEATNTFYFESNEGSPLRTAIYKVDGKGKKTK 414

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              +E ++     +     I           I +   +G +   LV+++ L+ 
Sbjct: 415 LSKQEGTHKAIFSNNMKYYINTFSNINTPPVITLNDNNGKELATLVDNNKLKH 467


>gi|205352044|ref|YP_002225845.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|226706809|sp|B5R752|6PGL_SALG2 RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|205271825|emb|CAR36659.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326627085|gb|EGE33428.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 331

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 70/233 (30%), Gaps = 14/233 (6%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 2   KQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQTMVVSPDKRYLYVGVRPEFRVL 61

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPD-SSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            Y +     A         +  S +  S D   + VF               +G   + +
Sbjct: 62  AYRIAPDDGALT-FAAESALPGSPTHISTDHHGRFVFVGSYNAGNVSVTRLQDGLPVELV 120

Query: 342 -SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNLQA 394
              +          +P    +       ++  +  +  DG        E   VE +  + 
Sbjct: 121 GVVEGLDGCHSANITPDNRTLWVPALKQDRICLFTLSDDGHLVAQEPAEVNTVEGAGPRH 180

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
             + P+ R   +   +   +       + +G  E   TL   PA  SD +W  
Sbjct: 181 MVFHPN-RQYAYCVNELNSSVDVWQLKNPHGEIECVQTLDMMPADFSDTRWAA 232


>gi|163750219|ref|ZP_02157461.1| hypothetical protein KT99_10173 [Shewanella benthica KT99]
 gi|161330075|gb|EDQ01059.1| hypothetical protein KT99_10173 [Shewanella benthica KT99]
          Length = 689

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 10/85 (11%)

Query: 355 SPQGDLIAFTKFSGEKF----------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           SP GD +AFT+    +            + ++   G +   +     +    WS  G  +
Sbjct: 46  SPSGDHVAFTRNVPRELYKEENGLHWAELYLVDDKGVERPYITGQVTVNNIQWSADGSLI 105

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNET 429
            F  K   D  + LY I  NG    
Sbjct: 106 YFLAKMGEDKHTSLYQIPFNGGQAQ 130



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 40/173 (23%)

Query: 310 SPDSSQIVFESD--RE--------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           SP    + F  +  RE           +LY++   G ++  I+   + +  +  WS  G 
Sbjct: 46  SPSGDHVAFTRNVPRELYKEENGLHWAELYLVDDKGVERPYIT--GQVTVNNIQWSADGS 103

Query: 360 LIAFTKFSGEKFA--IGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDT- 414
           LI F    GE     +  +  +G Q +    +++++L +   S  G+ +    K   D  
Sbjct: 104 LIYFLAKMGEDKHTSLYQIPFNGGQAQKTLGLKETDLASYALSHDGKQIAIIAKPAKDKS 163

Query: 415 -------------------GSKLYSIDLNGRNETLINTP----AYASDPQWVG 444
                               ++L+ IDL   ++ L         Y SD QW  
Sbjct: 164 VKDLEKLGFMAEVYEENLENNQLFVIDLAVTDKPLTPIAWNIEDYVSDVQWSA 216



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 37/112 (33%), Gaps = 13/112 (11%)

Query: 265 FSSNGKRALISVQKDE----------AMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
            S +G     +                 ++Y VD +      +T  + +N +  +S D S
Sbjct: 45  VSPSGDHVAFTRNVPRELYKEENGLHWAELYLVDDKGVERPYITGQVTVN-NIQWSADGS 103

Query: 315 QIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            I F +     +   LY +  NG   ++    KE        S  G  IA  
Sbjct: 104 LIYFLAKMGEDKHTSLYQIPFNGGQAQKTLGLKETDLASYALSHDGKQIAII 155


>gi|114586904|ref|XP_001165590.1| PREDICTED: N-acylaminoacyl-peptide hydrolase isoform 6 [Pan
           troglodytes]
          Length = 757

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 31/222 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEP 217
           D+I +    ++     + +F  +   + + K+   LCV+D +  NI  L    + +    
Sbjct: 214 DEIARLKKPDQAIKGDQFVFYEDWGENMVSKSIPVLCVLDVESGNISVLEGVPENVSPGQ 273

Query: 218 R-FSPNQQKVAYATYDDEDIL----------RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             ++P    V +  +  E                     I    + + +    + +PR S
Sbjct: 274 AFWAPGDAGVVFVGWWHEPFRLGIRFCTNRRSALYYVDLIGGKCELLSDDSLAVSSPRLS 333

Query: 267 SNGKRALI----SVQKDEA-MDIYSVDLQSNA--------TERLT-NTLFINIS----AS 308
            +  R +     S+        +   D  +            +L  N   I  S      
Sbjct: 334 PDQCRIVYLQYPSLIPHHQCSQLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGC 393

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +S DS ++VF+S +  ++ L+ + +       ++       +
Sbjct: 394 WSADSQRVVFDSAQRSRQDLFAVDTQVGTVTSLTAGGSGGSW 435


>gi|57997033|emb|CAB53708.2| hypothetical protein [Homo sapiens]
 gi|117645642|emb|CAL38287.1| hypothetical protein [synthetic construct]
 gi|117646148|emb|CAL38541.1| hypothetical protein [synthetic construct]
 gi|208965690|dbj|BAG72859.1| WD repeat and SOCS box-containing 1 [synthetic construct]
          Length = 244

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 36/83 (43%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +  R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  
Sbjct: 148 NSGRIKIWDVYTGKLLLNLVDHTGVVRDLTFAPDGSLILVSASRDKTLRVWDLRDDGNMM 207

Query: 295 ERLTNTLFINISASYSPDSSQIV 317
           + L        S ++SPDSS + 
Sbjct: 208 KVLRGHQNWVYSCAFSPDSSMLC 230



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 28/81 (34%), Gaps = 1/81 (1%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  ++ DG+  +
Sbjct: 149 SGRIKIWDVYTGKLLLNLVDHTGVVRDLTFAPDGSLILVSASRDKTLRVWDLRDDGNMMK 208

Query: 385 LLVEDSNL-QAPTWSPSGRSL 404
           +L    N   +  +SP    L
Sbjct: 209 VLRGHQNWVYSCAFSPDSSML 229


>gi|328767488|gb|EGF77537.1| hypothetical protein BATDEDRAFT_35893 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 750

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 18/117 (15%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED------------SNL 392
              S  D  +SP G  I FT    E+ A      +     +L +                
Sbjct: 245 PFGSTTDYDFSPDGTTIVFTSRVPERKAAW--NTNTDVYTILTDGTQPPVSLSKKNLGAD 302

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDPQWVGFM 446
             PT+SPSG  + + + ++    S    +   +     + ++ T  +   P  V F+
Sbjct: 303 SLPTFSPSGDLIAWLQMREPGYESDKNVIVVYNRIKATQHIL-TKKWDRSPSSVAFL 358



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 57/135 (42%), Gaps = 26/135 (19%)

Query: 309 YSPDSSQIVFESD-------REGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDL 360
           +SPD + IVF S              +Y + ++G+     +S+    +   P +SP GDL
Sbjct: 254 FSPDGTTIVFTSRVPERKAAWNTNTDVYTILTDGTQPPVSLSKKNLGADSLPTFSPSGDL 313

Query: 361 IAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK----- 410
           IA+ +     +      I V  +  + + +L +  + ++P+      S+ F  +      
Sbjct: 314 IAWLQMREPGYESDKNVIVVYNRIKATQHILTKKWD-RSPS------SVAFLSETLLVIT 366

Query: 411 -DGDTGSKLYSIDLN 424
                 ++++++D+ 
Sbjct: 367 AQDKGHNRVFTVDIT 381



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 20/146 (13%), Positives = 46/146 (31%), Gaps = 19/146 (13%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-----------LFINISASYSPDS 313
           FS +G   + + +  E    +  +  ++    LT+            L  +   ++SP  
Sbjct: 254 FSPDGTTIVFTSRVPERKAAW--NTNTDVYTILTDGTQPPVSLSKKNLGADSLPTFSPSG 311

Query: 314 SQIVFESDR-----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             I +   R       K  + V     + Q  +++  + S     +  +  L+  T    
Sbjct: 312 DLIAWLQMREPGYESDKNVIVVYNRIKATQHILTKKWDRSPSSVAFLSE-TLLVITAQDK 370

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQA 394
               +  +     +      DS L +
Sbjct: 371 GHNRVFTVDITTDKVVERYSDSTLHS 396


>gi|301105301|ref|XP_002901734.1| dipeptidyl peptidase, putative [Phytophthora infestans T30-4]
 gi|262099072|gb|EEY57124.1| dipeptidyl peptidase, putative [Phytophthora infestans T30-4]
          Length = 787

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 58/200 (29%), Gaps = 64/200 (32%)

Query: 264 RFSSNGKRALI----SVQKDEAMDIYSVDLQSNATERLTNTL------------------ 301
            FS +G+          Q   +  +Y++D+ S     L                      
Sbjct: 27  SFSPDGRIVAFLHAPGAQSGLSRQLYALDVASRRVSLLAAPPNQGNTEGNLSLEEKLRRE 86

Query: 302 -------FINISASYSPDSSQIVFESDREGKE---QLYVMQSNGSDQKRI----SQDKEA 347
                   I  S +++P S      S R        +Y+ +  G++ K +    S     
Sbjct: 87  RQRQMGVGI-TSYAWNPSS-----LSQRILYPLQGDIYLQEQPGAELKLLFDKTSTGVAG 140

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS----------------- 390
              DP +SP G  +AF     E + I     +G Q+ + V                    
Sbjct: 141 GAIDPQFSPDGRWVAFV-QDKELYVIPSHVTEGGQQAVQVTQGARGVEGKSNGLACFLTQ 199

Query: 391 ----NLQAPTWSPSGRSLIF 406
                 +   WSP    + F
Sbjct: 200 EELSRFRGFWWSPDSTRIAF 219



 Score = 43.5 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 61/217 (28%), Gaps = 55/217 (25%)

Query: 218 RFSPNQQKVAYATYDDEDI---LRVYLMDTRIDRA-----PKRIGNFRSM---------- 259
            FSP+ + VA+            ++Y +D    R      P   GN              
Sbjct: 27  SFSPDGRIVAFLHAPGAQSGLSRQLYALDVASRRVSLLAAPPNQGNTEGNLSLEEKLRRE 86

Query: 260 --------ILAPRFSSNG--KRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFIN 304
                   I +  ++ +   +R L  +Q D    IY  +      + L     T      
Sbjct: 87  RQRQMGVGITSYAWNPSSLSQRILYPLQGD----IYLQEQPGAELKLLFDKTSTGVAGGA 142

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA----------------- 347
           I   +SPD   + F  D+E       +   G    +++Q                     
Sbjct: 143 IDPQFSPDGRWVAFVQDKELYVIPSHVTEGGQQAVQVTQGARGVEGKSNGLACFLTQEEL 202

Query: 348 -SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             +    WSP    IAF            +   GS E
Sbjct: 203 SRFRGFWWSPDSTRIAFEGIDESHIPKFRIMHSGSAE 239



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 35/253 (13%), Positives = 69/253 (27%), Gaps = 69/253 (27%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT-LFINISAS---- 308
                  + P+FS +G+       K+  +    V        ++T     +   ++    
Sbjct: 136 TGVAGGAIDPQFSPDGRWVAFVQDKELYVIPSHVTEGGQQAVQVTQGARGVEGKSNGLAC 195

Query: 309 --------------YSPDSSQIVFES-DREGKEQLYVMQSNGSDQK--------RISQDK 345
                         +SPDS++I FE  D     +  +M S  ++          R     
Sbjct: 196 FLTQEELSRFRGFWWSPDSTRIAFEGIDESHIPKFRIMHSGSAEPTGDAAQEDHRYPFAG 255

Query: 346 EASYF------DPVW----SPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLL------- 386
            A+         PVW    +P  D   +          ++GV + +  Q  +        
Sbjct: 256 AANPLRRLGIPTPVWMDFANPDPDF--YVSRVNWLPDHSLGVQRLNRLQTDVTFLRFDVQ 313

Query: 387 ----VEDSNLQAPTW-------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                       P W             S +    ++  ++ G     LY          
Sbjct: 314 TGRATTLLQESNPVWLNANYLFRNIEAESRNTFRFLWGSERTGFMHLYLYEYTAGAPGAR 373

Query: 430 LINTPAYASDPQW 442
           L+      +  +W
Sbjct: 374 LL---GAVTSGRW 383


>gi|194381934|dbj|BAG64336.1| unnamed protein product [Homo sapiens]
          Length = 461

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 49/284 (17%), Positives = 89/284 (31%), Gaps = 76/284 (26%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------------------ 227
           SG    ++   D       +        +    +SP+ +K+A                  
Sbjct: 131 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGRKLASGCKNGQILLWEPLHANP 190

Query: 228 ---YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
              Y     +D   V + DT   R  + +      +   R+  +G   L S  +D  + +
Sbjct: 191 ECRYVASSSKDG-SVRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQDRTIKV 247

Query: 285 Y-------------------SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           +                   ++ L ++    L    F    AS +P   Q    S +E K
Sbjct: 248 WRAHDGVLCRTLQGHGHWVNTMALSTDYA--LRTGAFEPAEASVNPQDLQ---GSLQELK 302

Query: 326 EQ-LYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           E+ L       G   +R+    +  +   +WSP  D    T+ +G +  I          
Sbjct: 303 ERALSRYNLVRGQGPERLVSGSD-DFTLFLWSPAEDKKPLTRMTGHQALIN--------- 352

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKK------DGDTGSKLYSI 421
           ++L          +SP  R +  +         DG TG  L S+
Sbjct: 353 QVL----------FSPDSRIVASASFDKSIKLWDGRTGKYLASL 386



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 47/170 (27%), Gaps = 30/170 (17%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 158

Query: 304 NISASYSPDSSQIV---------------------FESDREGKEQLYVMQSNGSDQKRIS 342
            +S S+SPD  ++                      + +       + +  +     +RI 
Sbjct: 159 VLSISWSPDGRKLASGCKNGQILLWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERIL 218

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                S     W   G  + ++        +     DG   R L    + 
Sbjct: 219 TGHTQSVTCLRWGGDG--LLYSASQDRTIKVWRAH-DGVLCRTLQGHGHW 265



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 316 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 372

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 373 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 431

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 432 ADEVYAVDWSPDGQRVA 448



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 278 RTGAFEPAEASVNPQDLQGSLQELKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 334

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 335 AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 372

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 373 KLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAM 426

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 427 DLPGHADEVYAVDWSPDGQRVA 448



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 45/147 (30%), Gaps = 32/147 (21%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            A  R T++L  +  A    ++SP    +   S   G   +     +        +    
Sbjct: 101 RAVTRCTSSLEGHSEAVISVAFSPTGKYLASGS---GDTTVRFWDLSTETPHFTCKGHRH 157

Query: 348 SYFDPVWSPQGDLIA---------------------FTKFSGEKFAIGVMKKD-GSQERL 385
                 WSP G  +A                     +   S +  ++ +     G  ER+
Sbjct: 158 WVLSISWSPDGRKLASGCKNGQILLWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERI 217

Query: 386 LV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           L     ++    W   G  L++S  +D
Sbjct: 218 LTGHTQSVTCLRWGGDG--LLYSASQD 242


>gi|328874122|gb|EGG22488.1| WD40 repeat-containing protein [Dictyostelium fasciculatum]
          Length = 509

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 70/190 (36%), Gaps = 11/190 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +Q           D   V + D       K +      + +  F+ NG+  ++S  +D
Sbjct: 229 SVDQHGSLVVVGSGGDDGEVTVYDNDSSSVKKSLKGHTKRVESVAFTPNGRS-VVSGSRD 287

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQ 338
             + ++  +++S  ++         +S +  P    +    SDR     L+ + S  S  
Sbjct: 288 RTVRLW--NVESGQSQS-AKYSGEVLSVNVHPSGDIVAVGGSDRSWA--LFDISSGSSSL 342

Query: 339 KRISQDKEASYFDP---VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            +I ++  A+        + P G  I        + ++  + ++     L      +++ 
Sbjct: 343 NQILKNGNAANGPCGAVRFHPDG-AILGVGSDDGQISLWDISQNKRAITLTAHTQAVRSI 401

Query: 396 TWSPSGRSLI 405
           ++S +G  ++
Sbjct: 402 SFSENGYFMV 411



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/247 (12%), Positives = 85/247 (34%), Gaps = 23/247 (9%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V SG     + V D D ++++       + +    F+PN + V   + D      V L +
Sbjct: 239 VGSGGDDGEVTVYDNDSSSVKKSLKGHTKRVESVAFTPNGRSVVSGSRDR----TVRLWN 294

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               ++  +   +   +L+     +G    +    D +  ++ +   S++  ++      
Sbjct: 295 VESGQS--QSAKYSGEVLSVNVHPSGDIVAVGGS-DRSWALFDISSGSSSLNQILKNGNA 351

Query: 304 NISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                    + PD + +   SD     Q+ +   + + +         +     +S  G 
Sbjct: 352 ANGPCGAVRFHPDGAILGVGSD---DGQISLWDISQNKRAITLTAHTQAVRSISFSENGY 408

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                        +  ++K    +   ++  +  + ++  SG  +  +       GS L 
Sbjct: 409 F--MVSCDDSVAKVWDLRKSTCLQTFDIDGKHGHSVSFDHSGSYIAIA-------GSSLT 459

Query: 420 SIDLNGR 426
            ++L+G+
Sbjct: 460 IVNLSGK 466


>gi|269973822|emb|CBE66797.1| CG3004-PA [Drosophila ananassae]
          Length = 312

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 60/151 (39%), Gaps = 11/151 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    S+ + D        + P  D  + +   SP+ + +A    +++    ++ + +  
Sbjct: 139 GSQNGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA--AANNKGNCYIWSLTSSP 196

Query: 247 D------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           D      R  K+I      IL  +FS +  R L++   D    I++ +        L+  
Sbjct: 197 DQKMSTLRPTKKIPAHSRYILRCKFSPD-SRLLLTTSGDGTACIWNTE-DFTKWRELSIE 254

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVM 331
                 A++S DS  + F +  +G  +L+ +
Sbjct: 255 NCWVWDAAFSADSKWL-FTASSDGVARLWKL 284



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 12/144 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------ 291
            V+L D + ++  + +    + I     S +G+    +        I+S+          
Sbjct: 144 SVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA-AANNKGNCYIWSLTSSPDQKMST 202

Query: 292 -NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              T+++       +   +SPDS  ++  S   G     +  +    + R    +    +
Sbjct: 203 LRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIWNTEDFTKWRELSIENCWVW 259

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIG 374
           D  +S     + FT  S     + 
Sbjct: 260 DAAFSADSKWL-FTASSDGVARLW 282



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 43/127 (33%), Gaps = 10/127 (7%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-------MK 377
              +++        +RI  + +AS  D   SP G  +A     G  +   +       M 
Sbjct: 142 NGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSSPDQKMS 201

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                +++      +    +SP  R L+ +    GD  + +++ +   +   L     + 
Sbjct: 202 TLRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIWNTEDFTKWRELSIENCWV 258

Query: 438 SDPQWVG 444
            D  +  
Sbjct: 259 WDAAFSA 265


>gi|265756023|ref|ZP_06090490.1| dipeptidyl peptidase IV [Bacteroides sp. 3_1_33FAA]
 gi|263234101|gb|EEZ19702.1| dipeptidyl peptidase IV [Bacteroides sp. 3_1_33FAA]
          Length = 733

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 52/147 (35%), Gaps = 23/147 (15%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------ 363
           S D  +I+  S + GKE   +   N +    I      S+ D + SP   LI        
Sbjct: 53  STDGKKIMQYSFKTGKETGTIFDVNTARDCSIK-----SFDDYIMSPDEKLILIQTDTKP 107

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID- 422
                      +     ++   L E+   Q P +SP G  + F R       + +Y +  
Sbjct: 108 IYRRSFTANYYIFNVKNNKMEPLSENGPQQVPLFSPDGNQIAFVRD------NNIYLVKL 161

Query: 423 LNGRNETLINTPAYASD-----PQWVG 444
           L G +E+ +      ++     P WV 
Sbjct: 162 LFGNSESQVTKDGKFNEVLNGIPDWVY 188



 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 66/179 (36%), Gaps = 35/179 (19%)

Query: 220 SPNQQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI---- 274
           S + +K+  Y+    ++   ++ ++T  D + K   +F   I+    S + K  LI    
Sbjct: 53  STDGKKIMQYSFKTGKETGTIFDVNTARDCSIK---SFDDYIM----SPDEKLILIQTDT 105

Query: 275 --SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               ++    + Y  ++++N  E L +         +SPD +QI F  D        V  
Sbjct: 106 KPIYRRSFTANYYIFNVKNNKMEPL-SENGPQQVPLFSPDGNQIAFVRD---NNIYLVKL 161

Query: 333 SNGSDQKRISQDK-----------------EASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             G+ + ++++D                          +S    ++A+ +F   +  + 
Sbjct: 162 LFGNSESQVTKDGKFNEVLNGIPDWVYEEEFGFNRAFDFSADSQMLAYIRFDESQVPMY 220



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 60/169 (35%), Gaps = 36/169 (21%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD---- 321
           S++GK+ +    K         D+ +      +   F +     SPD   I+ ++D    
Sbjct: 53  STDGKKIMQYSFKTGKETGTIFDVNT--ARDCSIKSFDDY--IMSPDEKLILIQTDTKPI 108

Query: 322 --REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             R      Y+     +  + +S++       P++SP G+ IAF + +     I ++K  
Sbjct: 109 YRRSFTANYYIFNVKNNKMEPLSENGPQQV--PLFSPDGNQIAFVRDN----NIYLVKLL 162

Query: 380 -GSQERLLVEDSNLQA-----PTW--------------SPSGRSLIFSR 408
            G+ E  + +D          P W              S   + L + R
Sbjct: 163 FGNSESQVTKDGKFNEVLNGIPDWVYEEEFGFNRAFDFSADSQMLAYIR 211



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 81/233 (34%), Gaps = 8/233 (3%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y+      G  NS++   +  + S + +     +D DG   R      +  L     + +
Sbjct: 242 YEYKYPMPGIDNSKVTVHTFDIKSKVTRKMDLPLDADGYIPRIKFTDDENALAIMTLNRH 301

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
           Q +      +    L   ++     +  K    + +++  P      K  ++  +KD   
Sbjct: 302 QNRFDLYFANPRSTLCKLMVRDEAPQYIKEEA-YSNIVFYP------KNFVVMSEKDGYN 354

Query: 283 DIYSVDLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            +Y      N  ++LT   F +     +   ++   FES+     +  + + +G  +K  
Sbjct: 355 HLYLYTSGGNLVKQLTKGNFEVKDFLGWDEATNTFYFESNEGSPLRTAIYKVDGKGKKTK 414

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
              +E ++     +     I           I +   +G +   LV+++ L+ 
Sbjct: 415 LSKQEGTHKAIFSNNMKYYINTFSNINTPPVITLNDNNGKELATLVDNNKLKH 467


>gi|256006150|ref|ZP_05431071.1| YD repeat protein [Clostridium thermocellum DSM 2360]
 gi|255989884|gb|EEU00045.1| YD repeat protein [Clostridium thermocellum DSM 2360]
          Length = 783

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 59/178 (33%), Gaps = 19/178 (10%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---- 322
            +G         D A ++ S    +  T R T      +S    PD  +I F+ DR    
Sbjct: 10  PDGTNIKY--DYDYAGNLVSTTDGNGNTTRYTYNSLNLLSEIIDPDGRKITFKYDRQGRM 67

Query: 323 ------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                 +G+   Y   ++ +   R   ++E       ++  G L A    SG        
Sbjct: 68  VQRIGKDGRSTYYNYNADNNITGR--WEEEGQMEKYEYNVDGSLAA--SISGTTIHTYAY 123

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              G  +        +    ++ +G   + SR  D       Y+ D+ GR  T+ N  
Sbjct: 124 TLAGRLKSKTTNGQKVLEYDYNKNG---LISRLPDISGTPVEYTYDVLGRLTTVTNGG 178


>gi|259645321|sp|B6V869|DPP5_TRITO RecName: Full=Dipeptidyl-peptidase 5; AltName:
           Full=Dipeptidyl-peptidase V; Short=DPP V; Short=DppV;
           Flags: Precursor
 gi|210076621|gb|ACJ06660.1| dipeptidylpeptidase V [Trichophyton tonsurans]
 gi|326469214|gb|EGD93223.1| dipeptidylpeptidase 5 [Trichophyton tonsurans CBS 112818]
          Length = 726

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 74/237 (31%), Gaps = 37/237 (15%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S  IY S+      +++ +     +V SG +  S      DG     + P +      P 
Sbjct: 166 SARIYDSLFVRH--WDTYVGTQFNAVFSGALTKSGDKYSFDGKLKNLVHPVKYAESPYPP 223

Query: 219 F--------SPNQQKVAYAT---------------YDDEDILRVYLMDTRIDRAPKRIGN 255
           F        S + + VA+ +               +                  P+    
Sbjct: 224 FGGSGDYDLSSDGKTVAFMSKAPELPKANLTTTYIFVVPHDGSRVAEPINKRNGPRTPQG 283

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISAS-- 308
                 +P FS +GKR        +  +     I+  ++ SN   +   +   + S    
Sbjct: 284 IEGASSSPVFSPDGKRIAYLQMATKNYESDRRVIHIAEVGSNKPVQRIASN-WDRSPEVV 342

Query: 309 -YSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLI 361
            +S D   +   ++     +L+ + ++  D      +  D   S F  V S +  LI
Sbjct: 343 KWSSDGRTLYVTAEDHATGKLFTLPADARDSHKPAVVKHDGSVSSFYFVGSSKSVLI 399



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 73/203 (35%), Gaps = 29/203 (14%)

Query: 265 FSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTL----------FINISA 307
            SS+GK      +  E          I+ V    +      N              + S 
Sbjct: 232 LSSDGKTVAFMSKAPELPKANLTTTYIFVVPHDGSRVAEPINKRNGPRTPQGIEGASSSP 291

Query: 308 SYSPDSSQIVF----ESDREGKEQLYVMQSNGSD--QKRISQDKEASYFDPVWSPQGDLI 361
            +SPD  +I +      + E   ++  +   GS+   +RI+ + + S     WS  G  +
Sbjct: 292 VFSPDGKRIAYLQMATKNYESDRRVIHIAEVGSNKPVQRIASNWDRSPEVVKWSSDGRTL 351

Query: 362 AFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             T     +G+ F +    +D  +  ++  D ++ +  +  S +S++ S        + L
Sbjct: 352 YVTAEDHATGKLFTLPADARDSHKPAVVKHDGSVSSFYFVGSSKSVLISGNS--LWSNAL 409

Query: 419 YSIDLNGRNETLINTPAYASDPQ 441
           + +   GR    +   A   DP+
Sbjct: 410 FQVATPGRPNRKLFY-ANEHDPE 431



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 32/278 (11%), Positives = 78/278 (28%), Gaps = 54/278 (19%)

Query: 211 DQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           D  + E  +  +  K+ Y   T   +  + +++ D +      + G+        + + +
Sbjct: 77  DSDISEITWLGDGTKIVYVNGTDSVKGGVGIWISDAKNFGNAYKAGSVNGAFSGLKLAKS 136

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT-------------ERLTNTLFINISASYS----P 311
           G +                +  +                      +    +A +S     
Sbjct: 137 GDKINFVGYGQSTTKGDLYNEAAAKEAVSSARIYDSLFVRHWDTYVGTQFNAVFSGALTK 196

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              +  F    +GK +  V     ++           Y     S  G  +AF   + E  
Sbjct: 197 SGDKYSF----DGKLKNLVHPVKYAESPYPPFGGSGDY---DLSSDGKTVAFMSKAPELP 249

Query: 372 A-------IGVMKKDGSQERLLVE-----------DSNLQAPTWSPSGRSLIFSR----- 408
                   I V+  DGS+    +            +    +P +SP G+ + + +     
Sbjct: 250 KANLTTTYIFVVPHDGSRVAEPINKRNGPRTPQGIEGASSSPVFSPDGKRIAYLQMATKN 309

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDP---QWV 443
            +       +  +  N   + + +   +   P   +W 
Sbjct: 310 YESDRRVIHIAEVGSNKPVQRIASN--WDRSPEVVKWS 345


>gi|260803992|ref|XP_002596873.1| hypothetical protein BRAFLDRAFT_131012 [Branchiostoma floridae]
 gi|229282133|gb|EEN52885.1| hypothetical protein BRAFLDRAFT_131012 [Branchiostoma floridae]
          Length = 633

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 62/177 (35%), Gaps = 17/177 (9%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +   ++   D  + +++ D  +    ++        SA + P+ + +     + G+    
Sbjct: 372 QHLFLTCAYDRRVFLWNADTHTPVWSKILEDPA--QSAEFHPNGTVVA-IGLQSGRW--L 426

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE----RL 385
           V+ ++  D   +  D    +    +SP G+ +A        + +  + ++G +     +L
Sbjct: 427 VLDTSSKDLVTVHTDGNEQHDCVRYSPDGNFLAVGSHDNIIY-LYSVTEEGRKYSRVGKL 485

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
               S +    WS   + +   R   GD     +S          +   A   D +W
Sbjct: 486 TGHSSFVTHLDWSSDSQYI---RSNSGDYEILYWSA----AMCRQVPAAASLRDVEW 535



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 20/154 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPR----FSPNQQKVAYATYDDEDILRVYLMD 243
                + + + D     +      +IL +P     F PN   VA             ++D
Sbjct: 379 AYDRRVFLWNADTHTPVW-----SKILEDPAQSAEFHPNGTVVAIGLQSGRW----LVLD 429

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNT 300
           T          +        R+S +G    +    D  + +YSV  +     R   LT  
Sbjct: 430 TSSKDLVTVHTDGNEQHDCVRYSPDGNFLAV-GSHDNIIYLYSVTEEGRKYSRVGKLTGH 488

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                   +S DS    +     G  ++    + 
Sbjct: 489 SSFVTHLDWSSDSQ---YIRSNSGDYEILYWSAA 519


>gi|164657574|ref|XP_001729913.1| hypothetical protein MGL_2899 [Malassezia globosa CBS 7966]
 gi|159103807|gb|EDP42699.1| hypothetical protein MGL_2899 [Malassezia globosa CBS 7966]
          Length = 363

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/262 (11%), Positives = 80/262 (30%), Gaps = 36/262 (13%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +     ++ + D +   +        + +    F    Q +A  +    D+       
Sbjct: 58  VATASEDTTIKIWDWETGELEQTLKGHTKPVQGITFDHAGQYLASCS---SDLAIKLWDG 114

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +  + I      + +  F   G + +++  +D+++ ++ V      +         
Sbjct: 115 NDGWKNVRTIHGHDHSVSSIEFMP-GDQHILTASRDKSLKLWEV-ATGFCSRTYVGHDDW 172

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ------ 357
             S   S D       S+    + + +  ++ S+ +   +  E       ++P       
Sbjct: 173 VRSVDVSSDGRWFASGSN---DQTIRIWDASSSEARHTLRGHEHVVECVAFAPVSAYNAI 229

Query: 358 ------------------GDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWS 398
                             G  +A          + +  + G   R+L   D+ +++  +S
Sbjct: 230 QTLMAVRLSKSDTDQVQPGQYLASGSRDKT---VRIWSQQGQCLRVLAGHDNWVRSLAFS 286

Query: 399 PSGRSLIFSRKKDGDTGSKLYS 420
           P+G+ L+            L +
Sbjct: 287 PNGKFLLSVSDDKSMRVWDLAT 308


>gi|123976611|ref|XP_001330573.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121897037|gb|EAY02170.1| conserved hypothetical protein [Trichomonas vaginalis G3]
          Length = 670

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 22/174 (12%)

Query: 218 RFSPNQQKVA--------YAT-----YDDEDILRVYLMDTRIDRAPKR-----IGNFRSM 259
           RFSP+ + +A        +       +       +   + + +   +R            
Sbjct: 79  RFSPDGKYLATGGDDAMIFVWQKVRCFGQPSTFGIPESELQPNPPVQRWQSKSFSGHTGD 138

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +    +  +  R   S   D  + ++ V   +   +  T+      S +  P    I  +
Sbjct: 139 VTGVSWFPDSTRIA-SCSFDGTIIVWDVKSATKLYQHQTSQSVGIASVAIDPLGKFIACQ 197

Query: 320 SDREGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
               GK  +Y   +N S +     +Q  +A      W+P G  I  T  +   +
Sbjct: 198 LL-NGKFDIYDPSANFSREYGSEFTQPDQALVSRICWTPDGSFIGMTSANSGGY 250


>gi|169601674|ref|XP_001794259.1| hypothetical protein SNOG_03708 [Phaeosphaeria nodorum SN15]
 gi|111067793|gb|EAT88913.1| hypothetical protein SNOG_03708 [Phaeosphaeria nodorum SN15]
          Length = 511

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 39/128 (30%), Gaps = 5/128 (3%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           ED   +       ++   R+   +  I    FS +G+    S   D  + ++S       
Sbjct: 375 EDCTLILWTPLSSNKPVTRMVGHQKQINQVTFSPDGQLLA-SAAWDNHVKLWSA-RDGKF 432

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              L   +       +S DS  +   S       L V        K      +   F   
Sbjct: 433 LNTLRAHVGPVYMTCFSADSRLLASCSK---DTTLKVWDMRTGKLKEDLPGHKDQVFALD 489

Query: 354 WSPQGDLI 361
           WSP G+ +
Sbjct: 490 WSPDGERV 497



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 54/139 (38%), Gaps = 9/139 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           + E + +     +L +     +N          + + +  FSP+ Q +A A +D+     
Sbjct: 366 IVERLATASEDCTLILWTPLSSNKPVTRMVGHQKQINQVTFSPDGQLLASAAWDN----H 421

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
           V L   R  +    +      +    FS++  R L S  KD  + ++  D+++   +  L
Sbjct: 422 VKLWSARDGKFLNTLRAHVGPVYMTCFSAD-SRLLASCSKDTTLKVW--DMRTGKLKEDL 478

Query: 298 TNTLFINISASYSPDSSQI 316
                   +  +SPD  ++
Sbjct: 479 PGHKDQVFALDWSPDGERV 497



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 56/183 (30%), Gaps = 15/183 (8%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + SG    ++ + D D     +      + +    +SP+   +A   YD+E  +RV+
Sbjct: 154 SGRMASGSGDKTVRIWDCDTGTPVHTLKGHTKWVLAVSYSPDGSLLATGGYDNE--VRVW 211

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSNATE 295
             +T         G     I +  +        G+  + S  KD  + ++  D      +
Sbjct: 212 DPNTGKQIGGPLKG-HTGFITSLTWEPFHLQEPGRPRVASSSKDGTVRVW--DAVGGKID 268

Query: 296 R-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             L           +    +  ++ S  +  + + V  ++                    
Sbjct: 269 YALAGHKGSVTCVKWG--GTGRIYTSSHD--KTIKVWDASVGTLVNTLSGHAHWVNHLAL 324

Query: 355 SPQ 357
           S  
Sbjct: 325 STD 327


>gi|331682074|ref|ZP_08382698.1| outer membrane protein [Escherichia coli H299]
 gi|331080753|gb|EGI51927.1| outer membrane protein [Escherichia coli H299]
          Length = 625

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 85/258 (32%), Gaps = 34/258 (13%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T            S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSLI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVTDIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALI-SVQKDEAMDIYSV-----DLQSNATERLTNTLFINI 305
              + +        S + K  LI  + + + + I ++     D  +     + + +    
Sbjct: 440 TGTSGKPGAWVMALSPDEKTLLIPGMVRGDIVRINTITHQKEDFPTGDARGIVSAMG--- 496

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              + P + +I+F  D +G  ++ V     S   +      + Y     SP G  +A   
Sbjct: 497 ---FRPKNGEIIFA-DSQGISRISVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVS 550

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +  + + I ++  +  Q   +   S +    +S  GR +    K      ++L  +D   
Sbjct: 551 YGLQGYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKIFVMAK------NRLIQMDRT- 602

Query: 426 RNETLINTPAYASDPQWV 443
                ++  A    PQ+ 
Sbjct: 603 ---RSLDPQAIIRHPQYG 617


>gi|124005030|ref|ZP_01689873.1| WD-40 repeat-protein [Microscilla marina ATCC 23134]
 gi|123989708|gb|EAY29254.1| WD-40 repeat-protein [Microscilla marina ATCC 23134]
          Length = 316

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 5/125 (4%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +D D   +R    + D+        PNQ+  A    D      + + DT        I  
Sbjct: 137 LDFDNWAVRKHLKASDKHARVIAVHPNQKSFAIGYSDH----HIRVFDTETLDLQHTIAA 192

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             + + A R+S +G+  + S  +D  + +++V       + +   ++   S  +SPD   
Sbjct: 193 HSNSVFALRYSPDGQHLV-SGGRDAHLKVWNVSQDYTLHQSIVAHMYALNSLDFSPDGQY 251

Query: 316 IVFES 320
            V  S
Sbjct: 252 FVTGS 256


>gi|197098102|ref|NP_001127213.1| WD repeat-containing protein 5B [Pongo abelii]
 gi|75070930|sp|Q5RE95|WDR5B_PONAB RecName: Full=WD repeat-containing protein 5B
 gi|55726281|emb|CAH89912.1| hypothetical protein [Pongo abelii]
          Length = 330

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/263 (15%), Positives = 90/263 (34%), Gaps = 32/263 (12%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP----SRDQILFEPRFSPN 222
           T E GD  +++   S +  S  +            N  Y          + +   +FSPN
Sbjct: 3   TKESGDAKAQLALSSSANQSKEVP----------ENPNYALKCTLVGHTEAVSSVKFSPN 52

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A ++ D      + +      +  + +      I    +SS+  R + S   D+ +
Sbjct: 53  GEWLASSSADR----LIIIWGAYDGKYERTLYGHNLEISDVAWSSDSSRLV-SASDDKTL 107

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++ +       + L          +++P S+ I+  S     E + + +       +  
Sbjct: 108 KLWDM-RSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSF---DETVKIWEVKTGKCLKTL 163

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSN--LQAPTWSP 399
                      ++  G LI    + G      +      Q  + LV+D N  +    +SP
Sbjct: 164 SAHSDPVSAVHFNCSGSLIVSGSYDG---LCRIWDAASGQCLKTLVDDDNPPVSFVKFSP 220

Query: 400 SGRSLIFSRKKDGDTGSKLYSID 422
           +G+ ++ +     D   KL+   
Sbjct: 221 NGKYILTATL---DNTLKLWDYS 240


>gi|322697531|gb|EFY89310.1| eukaryotic translation initiation factor subunit eIF2A, putative
           [Metarhizium acridum CQMa 102]
          Length = 684

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 56/160 (35%), Gaps = 7/160 (4%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V  S  S   + +L ++  +GA    +T  ++  + +  +SPN ++             +
Sbjct: 244 VDRSGKSYYGETTLYLLSTNGAFDARVTLDKEGPIHDVSWSPNSREFGVVYGYMPAKATI 303

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +      DRA  +            FS N +  L++   + A  I   DL+ +  +  T 
Sbjct: 304 FN-----DRAVAKYSFPLGPRNTITFSPNARFVLVAGFGNLAGQIDVYDLEKDYRKVCTI 358

Query: 300 TLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSD 337
                    +SPDS  I     S R   +    +   G  
Sbjct: 359 ESGNPSVCEWSPDSRYIMTATTSPRLRVDNGVKLWHVGGS 398



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 66/210 (31%), Gaps = 19/210 (9%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKD------ 279
            +          V + +  + + P  +   F+   +  +++  G   L+  Q D      
Sbjct: 190 VFVPERKGQPAVVKVYNVPLFQNPISQKTFFKGDKVQFKWNKRGSSLLVLAQTDVDRSGK 249

Query: 280 ---EAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                  +Y +        R+T +        S+SP+S +  F            + ++ 
Sbjct: 250 SYYGETTLYLLSTNGAFDARVTLDKEGPIHDVSWSPNSRE--FGVVYGYMPAKATIFNDR 307

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQA 394
           +  K        +     +SP    +    F      I V   +    ++  +E  N   
Sbjct: 308 AVAKYSFPLGPRNTI--TFSPNARFVLVAGFGNLAGQIDVYDLEKDYRKVCTIESGNPSV 365

Query: 395 PTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
             WSP  R ++ +        D G KL+ +
Sbjct: 366 CEWSPDSRYIMTATTSPRLRVDNGVKLWHV 395



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 77/208 (37%), Gaps = 22/208 (10%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAM---DIYSVDLQSNATERLTNTLFINISAS 308
           R+    +  LAP  S N   A+   ++        +Y+V L  N   + T      +   
Sbjct: 170 RVEGAANFALAPG-SQNHAVAVFVPERKGQPAVVKVYNVPLFQNPISQKTFFKGDKVQFK 228

Query: 309 YSPDSSQIVFES----DREGKE-----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           ++   S ++  +    DR GK       LY++ +NG+   R++ DKE    D  WSP   
Sbjct: 229 WNKRGSSLLVLAQTDVDRSGKSYYGETTLYLLSTNGAFDARVTLDKEGPIHDVSWSPNSR 288

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
              F    G   A   +  D +  +           T+SP+ R ++ +   +      +Y
Sbjct: 289 E--FGVVYGYMPAKATIFNDRAVAKYSFPLGPRNTITFSPNARFVLVAGFGNLAGQIDVY 346

Query: 420 SIDLNGRNETLINTPAYASDPQ---WVG 444
            ++ + R    I     + +P    W  
Sbjct: 347 DLEKDYRKVCTI----ESGNPSVCEWSP 370


>gi|298246946|ref|ZP_06970751.1| hypothetical protein Krac_4434 [Ktedonobacter racemifer DSM 44963]
 gi|297549605|gb|EFH83471.1| hypothetical protein Krac_4434 [Ktedonobacter racemifer DSM 44963]
          Length = 453

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/208 (15%), Positives = 69/208 (33%), Gaps = 39/208 (18%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMD---------IYSVDLQSNATERLTNTLF-- 302
           G  R+M+  P    +    + S  +D +           +   D+ + +   + N     
Sbjct: 66  GTARAMVTEPLTLGDHPTIVYSTNQDTSSSGNAEPLMGALKRYDVTTGSKAVIVNVPGAR 125

Query: 303 INISASYSPDSSQIVFES-------DREGKEQ---LYVMQSNGSDQKRI--SQDKEASYF 350
           I+ +A  S D   I+F S       D+ G  +   + V++ +G D + +  +        
Sbjct: 126 ID-NAQVSNDGQWILFTSASKSATTDQRGSMRDVKVQVVRVDGQDLQTLYCTTRSVTDLP 184

Query: 351 DPVWSPQGDLIAFTKFSGEKFA--------IGVMKKDGSQERLLVEDSNLQAP-----TW 397
              WSP    IA  K   +           + V+     Q + +   +          +W
Sbjct: 185 YIKWSPDQQSIAMLKDESDNATPNPHETRLVQVLSTSTGQIQNVFTSTMAGQVIIGYSSW 244

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +     + +      +    +Y +D+ G
Sbjct: 245 A-DNTHI-YMYDAGENARLNIYLLDITG 270



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 49/298 (16%), Positives = 101/298 (33%), Gaps = 47/298 (15%)

Query: 131 WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK 190
           +DV        K    +    R     +S+D      G+   F S     +      +  
Sbjct: 108 YDVTTG----SKAVIVNVPGARIDNAQVSND------GQWILFTSASKSATTDQRGSMRD 157

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTR--- 245
             + V+  DG +++ L  +   +   P  ++SP+QQ +A    D+ D       +TR   
Sbjct: 158 VKVQVVRVDGQDLQTLYCTTRSVTDLPYIKWSPDQQSIA-MLKDESDNATPNPHETRLVQ 216

Query: 246 -IDRAPKRIGNFRSMILA-------PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +  +  +I N  +  +A         ++ N    +    ++  ++IY +D+   A + +
Sbjct: 217 VLSTSTGQIQNVFTSTMAGQVIIGYSSWADNTHIYMYDAGENARLNIYLLDITGGANQHV 276

Query: 298 TNTLFINISASY---SPDSSQIVFESDREGKEQLYV--------MQSNGSDQKRISQDKE 346
            +   I +   +   + D S++    D  G +Q           M + G   + I    +
Sbjct: 277 GDLTTI-LKGQFKGMASDGSKLY--VDYNGCDQYSCSPPSSVLSMSATGGTSQTIWHSTQ 333

Query: 347 ASYFDPVWSPQGDLIAFTKF--------SGEKFAIGVMKKDGS-QERLLVEDSNLQAP 395
            +  +        L+                   I ++  DGS  +RL   D     P
Sbjct: 334 YNVVEACPINDHQLLINISNVQQHPGPPDTSHNGIWILNDDGSLGQRLTTADQQSTNP 391


>gi|326779521|ref|ZP_08238786.1| NB-ARC domain protein [Streptomyces cf. griseus XylebKG-1]
 gi|326659854|gb|EGE44700.1| NB-ARC domain protein [Streptomyces cf. griseus XylebKG-1]
          Length = 1195

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 43/320 (13%), Positives = 100/320 (31%), Gaps = 34/320 (10%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMD 197
           +  + +     + R     ++D + +S     G   +  +   ++ +V G    +L V +
Sbjct: 558 LAARAWTGPALAQRWEPPDLTDRLLRSSLVHPGPVTALAVAPDDAWLVGGCADGTLHVWE 617

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
               +      +    +     + +   +  A+ D          +T            R
Sbjct: 618 TRTWSRLATVRAHTDRVAAVSVASDGSWLVSASADG----TAKKWETATWTCAGTFSGHR 673

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             + A   S +G   L++   D  +  ++ D   + T +L +  +     S+ PD S   
Sbjct: 674 KAVTALAVSPDG-SVLVTGSADRTLRTWNPD-DGSCTAKLKHHAYAITGISFHPDGSHF- 730

Query: 318 FESDRE-------GKEQLYV-MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           F +          G  +  + + ++G     ++   +           G  +   +    
Sbjct: 731 FSACHGEVARWATGTSRCSIPVSADGESVGPVAVAGDRGVVLST----GRGLYLVRRPTH 786

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD-------GDTGSKLYSID 422
           +    V   D      +V+   L A   S  G  +  +           G++G +L +  
Sbjct: 787 R---AVPALDSGDAPRIVDAGPLTALAVSDDGDLIALAGPTGVTQIRSIGNSGFQLVATG 843

Query: 423 LNGRNETLINTPAYASDPQW 442
             G     +N  A+A    W
Sbjct: 844 HLGT----VNDVAFAHSGSW 859



 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 39/122 (31%), Gaps = 7/122 (5%)

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
            +   R  + A   + +G   + +   D  + I+  D+ S     +       IS + +PD
Sbjct: 1032 VSGHRGKVAAAASAPDGSWIV-TGGADAQIKIW--DVASRTPRGIVRHSAAVISTAIAPD 1088

Query: 313  SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
             + +    D  G   + V+           +       +   SP G  I+    S     
Sbjct: 1089 GTWLA-GGDVHGT--VCVLDMPRGTITGTFRTASGPVKNIAISPDGTWISVVS-SPRTIE 1144

Query: 373  IG 374
            I 
Sbjct: 1145 IW 1146


>gi|303289387|ref|XP_003063981.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226454297|gb|EEH51603.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 928

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/247 (16%), Positives = 89/247 (36%), Gaps = 23/247 (9%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            N++ + D    ++       D  +      P+  K  +AT  D++ ++++   T     
Sbjct: 34  DNTVALRDPKTGDVEDSFEDHDDAVNVLAVHPDGAK--FATGSDDNCVKLFSFTTSKREF 91

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              +  F   + A  FS++G     +  +D  + + ++   S   E  TN   +  S ++
Sbjct: 92  ESNVTRFTLPVRALAFSNDGALLA-AGGEDSTIKVINMADNSVHLELPTNAKCVK-SIAF 149

Query: 310 SPDSSQIVFESDREGKEQLYVMQS--NGSDQKRI--------SQDKEASYFDPVWSPQGD 359
            P    +    D  G   ++ ++    GS+  R+        ++          W P G 
Sbjct: 150 DPIGEYVAAV-DDTGVLTVWALKEIKAGSEDNRVLCATTAPTTEADSPRVNGVSWRPDGA 208

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDGDT 414
           ++A      +            ++  L ED+   A       WSP+G+ L+       D 
Sbjct: 209 VVAVPGRENDVTFFARGSWRELEDHRLFEDAKGHAGAVATCRWSPNGKYLL---TTGADN 265

Query: 415 GSKLYSI 421
            + ++ +
Sbjct: 266 AAVVWDV 272


>gi|74691777|sp|Q74ZN0|HIR1_ASHGO RecName: Full=Protein HIR1
          Length = 825

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 76/229 (33%), Gaps = 36/229 (15%)

Query: 220 SPNQQKVAYATYDDE-DILRV----------YLMDTRIDRAPKRIGN---FRSMILAPRF 265
           S + Q+VA    D +  I  V               R ++  K + N       + A +F
Sbjct: 26  SSDGQRVATGGLDGKIRIWSVADILVFAKPKVSWPAREEQLRKPLANMSRHTGSVTALKF 85

Query: 266 SSNGK--------RALISVQKDEAMDIYSVDLQS-----NATERLTNTLFINISASYSPD 312
           S + K        + L+  +K+E       D+++     N   RL           ++PD
Sbjct: 86  SPDNKYLASGSDDKILLIWEKEEGAVQPLFDMENDLEHWNVRRRLVAHDNDIQDICWAPD 145

Query: 313 SSQIVFES-DRE-----GK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           SS +V    DR      G   E++     + S  K +  D    YF    S    +  F 
Sbjct: 146 SSILVTVGLDRSIIVWNGSTFEKIKRFDVHQSHVKGVVFDPANKYFATA-SDDRTVKVFR 204

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
              G   +  +        +     +  +  +WSP G+ +      +G 
Sbjct: 205 YHKGTDLSFTIEHIITEPFQGSPLTTYFRRLSWSPDGQHIAVPNATNGP 253



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 41/133 (30%), Gaps = 19/133 (14%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D +  N+R    + D  + +  ++P+   +     D      + + +       KR    
Sbjct: 120 DLEHWNVRRRLVAHDNDIQDICWAPDSSILVTVGLDR----SIIVWNGSTFEKIKRFDVH 175

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINISA----- 307
           +S +    F    K    +   D  + ++      DL       +T       S      
Sbjct: 176 QSHVKGVVFDPANKYFA-TASDDRTVKVFRYHKGTDLSFTIEHIITEP--FQGSPLTTYF 232

Query: 308 ---SYSPDSSQIV 317
              S+SPD   I 
Sbjct: 233 RRLSWSPDGQHIA 245


>gi|330506323|ref|YP_004382751.1| acylamino-acid-releasing enzyme [Methanosaeta concilii GP-6]
 gi|328927131|gb|AEB66933.1| Acylamino-acid-releasing enzyme [Methanosaeta concilii GP-6]
          Length = 694

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/184 (11%), Positives = 63/184 (34%), Gaps = 8/184 (4%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTL 301
           +  +   P+ I        +   S +G +       +   +I+   +    + + +TN  
Sbjct: 30  NGNVTLIPRNILFSSEDKFSVMLSPDGSKISYIAPVNGVTNIWVGPVGDPGSAKPVTNDT 89

Query: 302 FIN-ISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS--- 355
           +      +++  +  I++  D+ G    Q+Y +  +    K  +            S   
Sbjct: 90  YRGITRYNWAYTNEHILYLQDKNGDWNWQVYSVNLSNEKIKNFTHLNGVQTTIQALSFKY 149

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P+  +I     S E   +  +  +     LL+++       +      + F+ ++    G
Sbjct: 150 PEEIIIGLNNRSPEFRDLYRLNIETGGMTLLLKNDGFHK-FYIDDDYHIRFASRQTPGGG 208

Query: 416 SKLY 419
            +++
Sbjct: 209 KEIF 212



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDS--NLQAPTWSPSGRSLIF 406
           F  + SP G  I++         I V    D    + +  D+   +    W+ +   +++
Sbjct: 48  FSVMLSPDGSKISYIAPVNGVTNIWVGPVGDPGSAKPVTNDTYRGITRYNWAYTNEHILY 107

Query: 407 SRKKDGDTGSKLYSIDLN 424
            + K+GD   ++YS++L+
Sbjct: 108 LQDKNGDWNWQVYSVNLS 125


>gi|326518140|dbj|BAK07322.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 312

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 51/177 (28%), Gaps = 11/177 (6%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF--SSNGKRALISVQKDEAMDIYSVDLQ 290
             +++  Y+            GN +S+  A     S NG   +++   D           
Sbjct: 72  HGELICKYVDQPGAAFCTNLTGNKKSITNAVEIYESPNGSTRVMAANND----CVVRTFD 127

Query: 291 SNATERLTNTLFI--NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +     LT   F     + S SPD   +    D        +  S    +    +     
Sbjct: 128 TEKYSLLTQFPFAWSVNNMSVSPDGKLLAVLGDSS---DCLIADSASGKEIASLRGHADY 184

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            F   W P G ++A            V     +   L      ++   +SP GR L 
Sbjct: 185 SFASAWHPDGRVLATGNQDRTCRLWDVRNPSEAFAVLEGRIGAVRGLRFSPDGRFLA 241



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 46/155 (29%), Gaps = 9/155 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + +A       D     + D+   +    +        A  +  +G+    +  
Sbjct: 147 SVSPDGKLLAV----LGDSSDCLIADSASGKEIASLRGHADYSFASAWHPDGRVLA-TGN 201

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D    ++ V   S A   L   +       +SPD     F +  E  + + V       
Sbjct: 202 QDRTCRLWDVRNPSEAFAVLEGRIGAVRGLRFSPDGR---FLAAAEPADFVCVYDVAAGY 258

Query: 338 QKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKF 371
            +    D         +SP  G    F   +   +
Sbjct: 259 ARAQEIDLFGEIAGVFFSPDDGAEALFVGVADRTY 293



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 12/122 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   F   + P+ + +A    D    +  V            RIG  R +    RF
Sbjct: 178 LRGHADYSFASAWHPDGRVLATGNQDRTCRLWDVRNPSEAFAVLEGRIGAVRGL----RF 233

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSP-DSSQIVF--ESD 321
           S +G+        + A  +   D+ +     +  +         +SP D ++ +F   +D
Sbjct: 234 SPDGRFLA---AAEPADFVCVYDVAAGYARAQEIDLFGEIAGVFFSPDDGAEALFVGVAD 290

Query: 322 RE 323
           R 
Sbjct: 291 RT 292


>gi|318077503|ref|ZP_07984835.1| peptide hydrolase [Streptomyces sp. SA3_actF]
          Length = 664

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 6/153 (3%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           + +  R+L         ++Y+ D  + A  ++T+        + SPD + I +  D +G 
Sbjct: 91  APD--RSLFVSNATGTYELYAWDRATGAQRQVTDRENGTTDGTLSPDGAWIWWFDDHDGD 148

Query: 326 E-QLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGS 381
           E  ++  Q  + G D + +     A          G  +     S E  ++  V++  G+
Sbjct: 149 EFGVWRRQPFAGGEDAEALPGVAAAYSAGLALGRDGRTVVVGSSSDEHGSLVHVVRDAGA 208

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
              +     +      S  G  L+    + GD 
Sbjct: 209 PVEVYRHRESAGVGDLSYDGSLLVVEHTEHGDA 241


>gi|307165943|gb|EFN60270.1| Fizzy-related protein-like protein [Camponotus floridanus]
          Length = 494

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/247 (14%), Positives = 73/247 (29%), Gaps = 33/247 (13%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR---------FSPNQQK 225
           SRI F             L ++D    N+  +       L+             S +   
Sbjct: 173 SRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSSDGNS 232

Query: 226 VAYATYDDEDIL--------RVYLMDTRIDRAPKRIGNFRSMILAPRFS----SNGKRAL 273
           V    +++   L         + + D  +++   ++    + + A  ++    S+G R  
Sbjct: 233 VTSVAWNERGNLVAVGTHMGYIQVWDVAVNKQVSKLQGHSARVGALAWNGEVLSSGSRDR 292

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQ 332
           + +Q+D                RL           +SPD+  +       G   +LYV  
Sbjct: 293 LILQRDVRTPCVV------GERRLGAHRQEVCGLKWSPDNQYLA----SGGNDNRLYVWN 342

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSN 391
            +     +   +  A+     WSP    +  +        I       G   + +   S 
Sbjct: 343 LHSLSPIQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQ 402

Query: 392 LQAPTWS 398
           +    WS
Sbjct: 403 VCNLAWS 409



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 5/145 (3%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           ++SP+ Q +A       +  R+Y+ +       +      + + A  +S +    L S  
Sbjct: 321 KWSPDNQYLA----SGGNDNRLYVWNLHSLSPIQTYTEHLAAVKAIAWSPHHHGLLASGG 376

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 I   +  +    +  +T     + ++S  SS++V  +    + Q+ V +     
Sbjct: 377 GTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELV-STHGYSQNQILVWKYPSLT 435

Query: 338 QKRISQDKEASYFDPVWSPQGDLIA 362
           Q                SP G+ I 
Sbjct: 436 QVAKLTGHSYRVLYLAMSPDGEAIV 460


>gi|302765479|ref|XP_002966160.1| hypothetical protein SELMODRAFT_407455 [Selaginella moellendorffii]
 gi|300165580|gb|EFJ32187.1| hypothetical protein SELMODRAFT_407455 [Selaginella moellendorffii]
          Length = 416

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 65/197 (32%), Gaps = 20/197 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    S+ + + D      +       +    F+P+ + V   + D      + + + R
Sbjct: 175 AGSQDFSVWMWNADSGACLSVFTGHSGSVICGCFTPDGKLVCTGSSD----CSLRVWNPR 230

Query: 246 IDRAPKRIGNFR---SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-------E 295
                + I         +     S +     ++   D +  +  V++QS           
Sbjct: 231 SGECIRNIQGHPYHRGGVTCVAVSRD-SSIALTGSADGS--VCLVNIQSGRVLGTLSGHT 287

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +    + ++ S ++   S  +     R+ K  L V         R++ D +   +  +WS
Sbjct: 288 QAIEAIALSPSLAWPSQSLSLAATGGRDKK--LIVWDLQTLSV-RLTCDHQDDVYRIIWS 344

Query: 356 PQGDLIAFTKFSGEKFA 372
           P  ++I      G   A
Sbjct: 345 PSSEMIYTACLDGSVHA 361



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 50/158 (31%), Gaps = 11/158 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           ++     + ++    SP +  V           ++++     D AP  +   +  I +  
Sbjct: 68  HIFTGHTESVYAVACSPVESSVVAT---GGGDDKIFIWKIGDDAAPLELKEHKDSISSLA 124

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDRE 323
           FS +GK             +   D   +   RL      + +   + P    ++  S   
Sbjct: 125 FSFDGKLLA---SGGLDGVVCVWDGVGSLKHRL-EGPGEDIVWLCWHPRGHILLAGSQ-- 178

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +++  ++      +      S     ++P G L+
Sbjct: 179 -DFSVWMWNADSGACLSVFTGHSGSVICGCFTPDGKLV 215


>gi|295133235|ref|YP_003583911.1| prolyl oligopeptidase family [Zunongwangia profunda SM-A87]
 gi|294981250|gb|ADF51715.1| prolyl oligopeptidase family [Zunongwangia profunda SM-A87]
          Length = 747

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 47/156 (30%), Gaps = 24/156 (15%)

Query: 265 FSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQ------ 315
           +  +         +    A  +  VD ++     + +      S ++   +  +      
Sbjct: 290 WKDDSSSFTFEFNQRGHQAYRVIKVDAKTGKATAIID----ETSPTFIDYNGKKYRHDVK 345

Query: 316 ----IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--- 368
               I++ S+R+G   LY+  SN    K             +     +   +   SG   
Sbjct: 346 GKDEIIWASERDGYNHLYLYDSNTGKVKNQITSGNWPVRKVIEVDDKNRAIYFTASGLDK 405

Query: 369 --EKFAIGV--MKKDGSQERLLVEDSNLQAPTWSPS 400
             + + I    +  DG        ++     T+SP 
Sbjct: 406 DQDPYLIHYCSIDFDGKNFTRFTTENGNHKVTFSPD 441



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 34/91 (37%), Gaps = 10/91 (10%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-----W 397
           +       DPV SP     AF K S     + V      +E  L  D            W
Sbjct: 154 KRGNEREGDPVPSPDQKYTAFIKNS----NLYVKDSKTKEETQLSFDGTKGFFYSANIIW 209

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           SP+   +I  + + G+    +Y ++ + +++
Sbjct: 210 SPNSEKIIAYKVRPGE-EHNIYFVESSPKDQ 239


>gi|293354371|ref|XP_344558.4| PREDICTED: WD repeat domain 17, partial [Rattus norvegicus]
          Length = 803

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 72/197 (36%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + ++F   ++P +   +A AT  +      ++ D 
Sbjct: 370 TASFDGTIKVWDINTLTAVYTSPGNEGVIFALSWAPGDLNCIAGATSRNG----AFIWDI 425

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R   + ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 426 QKGKMIQRFNEHGKNGIFYIAWSHKDSKRIA-TCSGDGFCIIRTLD--GKLLHKY-KHPA 481

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   +++ + S+ +   ++     A  F   WSP  + + 
Sbjct: 482 AVFGCDWSQNNKDMIATGCEDKHVRVFYVASSSNQPLKVFSGHTARVFHVKWSPLREGVL 541

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 542 CSGSDDGSVRIWDYTQD 558


>gi|293342438|ref|XP_002725233.1| PREDICTED: rCG59107-like isoform 3 [Rattus norvegicus]
          Length = 1322

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 72/197 (36%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + ++F   ++P +   +A AT  +      ++ D 
Sbjct: 411 TASFDGTIKVWDINTLTAVYTSPGNEGVIFALSWAPGDLNCIAGATSRNG----AFIWDI 466

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R   + ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 467 QKGKMIQRFNEHGKNGIFYIAWSHKDSKRIA-TCSGDGFCIIRTLD--GKLLHKY-KHPA 522

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   +++ + S+ +   ++     A  F   WSP  + + 
Sbjct: 523 AVFGCDWSQNNKDMIATGCEDKHVRVFYVASSSNQPLKVFSGHTARVFHVKWSPLREGVL 582

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 583 CSGSDDGSVRIWDYTQD 599


>gi|293342434|ref|XP_002725232.1| PREDICTED: rCG59107-like isoform 2 [Rattus norvegicus]
          Length = 1283

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 72/197 (36%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + ++F   ++P +   +A AT  +      ++ D 
Sbjct: 387 TASFDGTIKVWDINTLTAVYTSPGNEGVIFALSWAPGDLNCIAGATSRNG----AFIWDI 442

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R   + ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 443 QKGKMIQRFNEHGKNGIFYIAWSHKDSKRIA-TCSGDGFCIIRTLD--GKLLHKY-KHPA 498

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   +++ + S+ +   ++     A  F   WSP  + + 
Sbjct: 499 AVFGCDWSQNNKDMIATGCEDKHVRVFYVASSSNQPLKVFSGHTARVFHVKWSPLREGVL 558

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 559 CSGSDDGSVRIWDYTQD 575


>gi|302413201|ref|XP_003004433.1| minichromosome loss protein [Verticillium albo-atrum VaMs.102]
 gi|261357009|gb|EEY19437.1| minichromosome loss protein [Verticillium albo-atrum VaMs.102]
          Length = 835

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 63/201 (31%), Gaps = 22/201 (10%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            FV  S    +   S      D    R   P RD  L     SP+ +  A A+    D L
Sbjct: 69  FFVVGSEDGTVSVYSSITETFDRFITRTSLPIRDIAL-----SPDLKWCAVAS----DEL 119

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ------- 290
            V ++ T      + + +         F   G    +S   D  + +YS+          
Sbjct: 120 TVKIVGTFDHSYIRTLKDHGRPAKHVAFDPKGGLLAVSCT-DGIVYVYSLTADQPELIHK 178

Query: 291 -SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEAS 348
                  L     ++  A + PD   +           + V+  N  +++R  S      
Sbjct: 179 VDGIIGSLETDSDLSSEAVWHPDGRALAL---PTPTHDIQVVSKNDWEKQRAFSNGHLGD 235

Query: 349 YFDPVWSPQGDLIAFTKFSGE 369
                WSP G L+A     G+
Sbjct: 236 VTALAWSPNGALLATAAKDGK 256



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 69/238 (28%), Gaps = 27/238 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++PN  ++            + L  T  D  P  I   +   +    + +     +   
Sbjct: 22  AYTPNGSRLVTV----GSNNTIRLYKTGFDGEPINIDECQEQNVTVAAADD---FFVVGS 74

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D  + +YS  +       +T T       + SPD       SD    + +     +   
Sbjct: 75  EDGTVSVYS-SITETFDRFITRTSLPIRDIALSPDLKWCAVASDELTVKIVGTFDHSY-- 131

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG--------VMKKDGSQERLLVED 389
             R  +D         + P+G L+A +   G  +           + K DG    L  + 
Sbjct: 132 -IRTLKDHGRPAKHVAFDPKGGLLAVSCTDGIVYVYSLTADQPELIHKVDGIIGSLETDS 190

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP---QWVG 444
                  W P GR+L             +  +  N   +    +  +  D     W  
Sbjct: 191 DLSSEAVWHPDGRALALPT-----PTHDIQVVSKNDWEKQRAFSNGHLGDVTALAWSP 243


>gi|255072801|ref|XP_002500075.1| HIRA protein [Micromonas sp. RCC299]
 gi|226515337|gb|ACO61333.1| HIRA protein [Micromonas sp. RCC299]
          Length = 796

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 75/237 (31%), Gaps = 41/237 (17%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL--------RVYLMDTRIDRAPKR 252
               ++       +F     P+  ++A A  D +  L        R    D  + R    
Sbjct: 5   YKPEFVKHDGGSPIFSVDCHPDGTRMATAGGDQKVKLWNLEALKKREVEADPNVPRVLAT 64

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE----------------R 296
           + +  + +   RFS NG+    S   D  + +Y         +                 
Sbjct: 65  LSDHFNTVNCVRFSKNGRFLA-SGSTDSNVFLYEKRPGPGRAQFGSTDEPNVENWVNCQA 123

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVW 354
           L   +   I  +++PD S +   S       + V        +R++  K  + F     W
Sbjct: 124 LRGHVSDVIDIAWAPDDSMLASCSL---DNLIIVWDPATG--QRVTTLKGHTSFVKGVAW 178

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-------TWSPSGRSL 404
            P G  +A T+   +   +  +  D S    + E              +WSP G+++
Sbjct: 179 DPIGKFLA-TQADDKSCIVWRVD-DWSVVSKITEPYQSSMGATFSLRLSWSPDGKAV 233


>gi|293342436|ref|XP_001056850.2| PREDICTED: rCG59107-like isoform 1 [Rattus norvegicus]
 gi|149021489|gb|EDL78952.1| rCG59107, isoform CRA_a [Rattus norvegicus]
          Length = 1297

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 72/197 (36%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDT 244
           +     ++ V D +     Y +P  + ++F   ++P +   +A AT  +      ++ D 
Sbjct: 394 TASFDGTIKVWDINTLTAVYTSPGNEGVIFALSWAPGDLNCIAGATSRNG----AFIWDI 449

Query: 245 RIDRAPKRI-GNFRSMILAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           +  +  +R   + ++ I    +S  + KR   +   D    I ++D       +      
Sbjct: 450 QKGKMIQRFNEHGKNGIFYIAWSHKDSKRIA-TCSGDGFCIIRTLD--GKLLHKY-KHPA 505

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S ++  ++     +   +++ + S+ +   ++     A  F   WSP  + + 
Sbjct: 506 AVFGCDWSQNNKDMIATGCEDKHVRVFYVASSSNQPLKVFSGHTARVFHVKWSPLREGVL 565

Query: 363 FTKFSGEKFAIGVMKKD 379
            +        I    +D
Sbjct: 566 CSGSDDGSVRIWDYTQD 582


>gi|219668571|ref|YP_002459006.1| hypothetical protein Dhaf_2543 [Desulfitobacterium hafniense DCB-2]
 gi|219538831|gb|ACL20570.1| hypothetical protein Dhaf_2543 [Desulfitobacterium hafniense DCB-2]
          Length = 392

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/158 (15%), Positives = 62/158 (39%), Gaps = 10/158 (6%)

Query: 209 SRDQILFEPRFSPNQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           + +Q +F+  +SP+Q++V Y        + +   YL         + + + +  + +  +
Sbjct: 66  NANQEIFQITWSPDQEQVLYIQPGGASKKGLDEAYLWQIG-KEEARFVRDVQPTVRSLSW 124

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S + K  +IS +  E      V+ ++           ++    + PDS+ I + ++    
Sbjct: 125 SPDSKHFIISEKLAEGAINSIVNAETLQESPF-KPKSMDT-PVWKPDSTAIAYGNEFHEY 182

Query: 326 EQLY----VMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            + +    +      D   + + K+  Y    W  +G+
Sbjct: 183 GETWGFLEIYTLGDQDSDYLWKAKDTYYRVESWDQEGN 220



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 46/103 (44%), Gaps = 6/103 (5%)

Query: 308 SYSPDSSQIVFE----SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           ++SPD  Q+++     + ++G ++ Y+ Q  G ++ R  +D + +     WSP       
Sbjct: 75  TWSPDQEQVLYIQPGGASKKGLDEAYLWQI-GKEEARFVRDVQPTVRSLSWSPDSKHFII 133

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           ++   E     ++  +  QE    +  ++  P W P   ++ +
Sbjct: 134 SEKLAEGAINSIVNAETLQES-PFKPKSMDTPVWKPDSTAIAY 175


>gi|159899773|ref|YP_001546020.1| WD-40 repeat-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159892812|gb|ABX05892.1| WD-40 repeat protein [Herpetosiphon aurantiacus ATCC 23779]
          Length = 366

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 71/208 (34%), Gaps = 9/208 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F PNQQ +    YD     ++         A K+I    +       S++ K        
Sbjct: 64  FLPNQQLLVGVGYDGVYRWKLATSTIEQTLAAKQIYLAFTASGPLVVSTDRKTLTTWNST 123

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D       +   +   +  + T    +SA + +PD  QI+   ++    Q + + +  + 
Sbjct: 124 DGQK---ILAWNAKPLQLPSQTTAFEVSALAITPDQQQIIAAYNKGSMLQAWNVATGAAT 180

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-- 395
               +  K  S  +   SP G L+A   FSG      V+   G Q     E S    P  
Sbjct: 181 TTFGAPAKTGSIVEIALSPDGQLLASNDFSGVVQIWDVVS--GQQLHSFKEASLNYQPGK 238

Query: 396 -TWSPSGRSLIFSRKKDGDTGSKLYSID 422
             WS  G+ L  S       G  ++   
Sbjct: 239 LAWSHDGKWLAASSGDKNGGGVAIWDTS 266



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 67/230 (29%), Gaps = 30/230 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             +P+QQ++  A Y+   +L+ + + T               I+    S +G+       
Sbjct: 151 AITPDQQQII-AAYNKGSMLQAWNVATGAATTTFGAPAKTGSIVEIALSPDGQLLA---S 206

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSN 334
            D +  +   D+ S           +N      ++S D   +   S  +    + +  ++
Sbjct: 207 NDFSGVVQIWDVVSGQQLHSFKEASLNYQPGKLAWSHDGKWLAASSGDKNGGGVAIWDTS 266

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---------GSQERL 385
                   +  E  +    + P    +A    SG    I +             G  ER+
Sbjct: 267 SWSIYATHRSSEHQFAGLAFHPTAPTLAIGNSSG---LIELYDLTSKQVSNSLKGHAERV 323

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                      W+  G  L       G     L     +   +  +  PA
Sbjct: 324 TTL-------AWNADGSQLA----SGGKEPFVLIWDSTSLTEQQRLVLPA 362


>gi|29465691|gb|AAL99251.1| TupA protein [Penicillium marneffei]
          Length = 583

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 62/197 (31%), Gaps = 19/197 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALIS 275
            ++P+    A    +  D   V+  + +     + + +    S++   RFS +GK     
Sbjct: 238 NWNPD-DLPASQKREGPDWYAVFNPEVQRVLDVELVHHLVHDSVVCCVRFSRDGKYVA-- 294

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFIN-------ISASYSPDSSQIVFESDREGKEQL 328
                       D+ +           ++        S  +SPD   +   ++    +Q+
Sbjct: 295 --TGCNRSAQIFDVATGQNVATLQDESVDKDGDLYIRSVCFSPDGKYLATGAE---DKQI 349

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V        K +    E   +   ++  G  IA +    +   +  +  +G     L  
Sbjct: 350 RVWDIATRSIKHVFTGHEQDIYSLDFAGNGRYIA-SGSGDKTVRLWDV-LEGKLVYTLSI 407

Query: 389 DSNLQAPTWSPSGRSLI 405
           +  +     SP G  + 
Sbjct: 408 EDGVTTVAMSPDGHYVA 424


>gi|27311839|gb|AAO00885.1| Unknown protein [Arabidopsis thaliana]
          Length = 610

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 7/84 (8%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSS 267
               +    +SP+   +     D     R+ L D +     K IG       I A  +S 
Sbjct: 190 HTGFVLGAAYSPDGSSLVTVGADK----RIQLYDGKTGEPTKEIGQGEHSGSIFAVSWSP 245

Query: 268 NGKRALISVQKDEAMDIYSVDLQS 291
           +GK+  ++   D+++ ++ VD  S
Sbjct: 246 DGKK-FVTASADQSVKLWDVDAGS 268



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 40/246 (16%), Positives = 78/246 (31%), Gaps = 21/246 (8%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            S+ V   D  +               RF+PN  KVA  + D   +L+V+  ++      
Sbjct: 41  KSIFVRSIDNPSDAKEYTGHTAPTTVARFAPNGFKVA--SGDSSGMLKVWEPESIESTRG 98

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---IYSVDLQSNATERLTNTLFINISA 307
           +  G     +    +  +G+   +    D         + D  ++  E + ++  +N  A
Sbjct: 99  E-YGIISGRLNDIAW--DGESQRVIAVGDGREQFGRCITADSGNSVGEIIGHSKSVNAVA 155

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
              P           +G    Y       + K  S           +SP G  +      
Sbjct: 156 -MKPQRPFRAATVGDDGNMVFYHGAPYKFNNK--SAQHTGFVLGAAYSPDGSSLVTV--- 209

Query: 368 GEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           G    I +      +    +       ++ A +WSP G+  + +     D   KL+ +D 
Sbjct: 210 GADKRIQLYDGKTGEPTKEIGQGEHSGSIFAVSWSPDGKKFVTAS---ADQSVKLWDVDA 266

Query: 424 NGRNET 429
               +T
Sbjct: 267 GSVIQT 272


>gi|302793957|ref|XP_002978743.1| hypothetical protein SELMODRAFT_109484 [Selaginella moellendorffii]
 gi|300153552|gb|EFJ20190.1| hypothetical protein SELMODRAFT_109484 [Selaginella moellendorffii]
          Length = 954

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 72/229 (31%), Gaps = 34/229 (14%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDE---DILRVYLMDTRIDRAPKRIG----NFRS 258
                   +F   F P+ Q+ A A  D +      R  + +   DR  +++     +   
Sbjct: 8   WLRHEGLQIFSVDFQPSGQRCATAGGDHKVRIWNTRPLMKEGEADRGGEKLLATLCDHFG 67

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIY--------SVDLQSNATER---------LTNTL 301
            +   R+S +G    ++   D ++ +         +V+  S              L    
Sbjct: 68  SVNCVRWSKSG--LYVASGSDGSLVLIHEKRHGTGTVEFGSGEPANVENWKVCASLRGHT 125

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              +  ++SPD S +   S  +   +++ M   G     +     +      W P G  +
Sbjct: 126 ADVVDLAWSPDDSMLATCSL-DNTVRIWKMP--GGSSVAVLTGHSSLVKGVAWDPIGSFL 182

Query: 362 AFTKFSGEKF-----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           A                  + +     R  V  +  +  +WSP G  +I
Sbjct: 183 ASQSDDKTVMIWQTSDWAAVHRAEGPWRKSVGSTFFRRLSWSPCGHFII 231



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 13/109 (11%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +S +      +   D  + I+ +    ++   LT    +    ++ P  S +  +SD +
Sbjct: 132 AWSPDDSMLA-TCSLDNTVRIWKMP-GGSSVAVLTGHSSLVKGVAWDPIGSFLASQSD-D 188

Query: 324 GKEQLY-------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               ++       V ++ G  +K +       +    WSP G  I  T 
Sbjct: 189 KTVMIWQTSDWAAVHRAEGPWRKSV---GSTFFRRLSWSPCGHFIITTH 234


>gi|134098205|ref|YP_001103866.1| IclR family transcriptional regulator [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291004374|ref|ZP_06562347.1| IclR family transcriptional regulator [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133910828|emb|CAM00941.1| transcriptional regulator, IclR family/regucalcin
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 288

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 44/158 (27%), Gaps = 25/158 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              P  + VA       D  R  L      RA + I +  +      +S +G R  +   
Sbjct: 102 ACDPAGRFVAGTFTHAHDPQRSALYLLDGGRA-RPIVDGLTAANGVAWSPDGSRMYLVDT 160

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               + +Y  D +                     +  + V  SD EG+     + + G  
Sbjct: 161 APRTIWVYDYDPERGRAR----------------NGRRWVVCSDSEGRPDGIAVDAEGGV 204

Query: 338 QKRISQDKEASYFDPV-------WSPQGDLIAFTKFSG 368
              +        + P        W+P    I    F G
Sbjct: 205 WVAMHWSGRIHRYAPSGDLETVLWAPT-RRITSIAFGG 241


>gi|123472066|ref|XP_001319229.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121902007|gb|EAY07006.1| hypothetical protein TVAG_174760 [Trichomonas vaginalis G3]
          Length = 438

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 66/175 (37%), Gaps = 19/175 (10%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           IL   +FSP+    A+   D + +  +   D  +       GN         FSSN K  
Sbjct: 141 ILCATQFSPDGHYFAFT--DKKTLFIINTSDGSLVGTGMIPGNEDQYTRIIAFSSNSKYV 198

Query: 273 LISVQKDEAMDIYSVDLQ--SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            I     ++ +IY  D    SN  + L     I     +SPDS ++ +    +G  Q+ +
Sbjct: 199 AI---GGKSNEIYVYDRANPSNVFQILKKHANIVSLLHFSPDSERL-YSGSYDG--QICI 252

Query: 331 MQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             +        +++I+Q+K         S  G ++A     G      VM  D S
Sbjct: 253 WDTKTFKLIKCREQINQEKGDGLVSFALSHDGKMLALGFVKGT-----VMLLDSS 302



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 26/203 (12%), Positives = 67/203 (33%), Gaps = 28/203 (13%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P+FS +   +   ++D  +               +   +   ++ A +FS +G     +
Sbjct: 101 MPKFSQDGNIL---SHDQIEWTTSPPHIKNTGIKLRYALSLNCILCATQFSPDGHYFAFT 157

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-----EGK-EQLY 329
               +   ++ ++    +   +   +       Y+     I F S+       GK  ++Y
Sbjct: 158 ----DKKTLFIINTSDGSL--VGTGMIPGNEDQYT---RIIAFSSNSKYVAIGGKSNEIY 208

Query: 330 VMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE----R 384
           V   +N S+  +I +          +SP  + +    + G    I +      +      
Sbjct: 209 VYDRANPSNVFQILKKHANIVSLLHFSPDSERLYSGSYDG---QICIWDTKTFKLIKCRE 265

Query: 385 LLVEDSNLQAPTW--SPSGRSLI 405
            + ++      ++  S  G+ L 
Sbjct: 266 QINQEKGDGLVSFALSHDGKMLA 288



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 60/161 (37%), Gaps = 21/161 (13%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVF 318
            P+FS +G      +  D+     S     N   +L   L +N    +  +SPD     F
Sbjct: 101 MPKFSQDGN----ILSHDQIEWTTSPPHIKNTGIKLRYALSLNCILCATQFSPDGHYFAF 156

Query: 319 ESDREGKEQLYVMQSNGS---DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                 K+ L+++ ++         I  +++       +S     +A     G+   I V
Sbjct: 157 T----DKKTLFIINTSDGSLVGTGMIPGNEDQYTRIIAFSSNSKYVAI---GGKSNEIYV 209

Query: 376 MKKD--GSQERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGD 413
             +    +  ++L + +N+ +   +SP    L +S   DG 
Sbjct: 210 YDRANPSNVFQILKKHANIVSLLHFSPDSERL-YSGSYDGQ 249


>gi|326692486|ref|ZP_08229491.1| hypothetical protein LargK3_01839 [Leuconostoc argentinum KCTC
           3773]
          Length = 343

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/193 (15%), Positives = 63/193 (32%), Gaps = 29/193 (15%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           + +   DD     V    T     P+ I          RFS +G+ A +  +    + + 
Sbjct: 166 ITFDVQDDGQFTEVARFHTEEGFGPRHI----------RFSPDGQYAYVLGELSSLLSVL 215

Query: 286 SVDLQSNATERLTNTLFINISAS---------YSPDSSQIVFESDREGKE-QLYVMQSNG 335
             + +    E +     I    +          S D  + ++ S+R      ++ + + G
Sbjct: 216 KYNAEDGTFEHVMTASTIPADWTAHNGSAALRISHDG-RFIYASNRGHNSIAVFKVMNEG 274

Query: 336 SDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           ++ +RI        F     W  + D +       +   +    ++  +  LL +D  + 
Sbjct: 275 AEIERIQLISSEGEFPRDMNWDDKQDFLVVANQDTDNVTLFARDQETGELTLLQKDFAI- 333

Query: 394 APTWSPSGRSLIF 406
                P G  + F
Sbjct: 334 -----PEGVLVAF 341


>gi|323163919|gb|EFZ49728.1| rhomboid family protein [Shigella sonnei 53G]
 gi|323170781|gb|EFZ56431.1| rhomboid family protein [Escherichia coli LT-68]
          Length = 625

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 83/254 (32%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T            S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSLI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+        +I  ++  ++  E            +  +
Sbjct: 440 TGTSGKPGAWVMALSPDERTLLVPGA--GRGNIVRINTITHQKEDFPAGDARGTISAMRF 497

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ V     S   +      + Y     SP G  +A   +  +
Sbjct: 498 RPENGEVIFA-DSQGISRISVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 554

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 555 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 603

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 604 SLDPQAIIRHPQYG 617


>gi|316939825|gb|ADU73859.1| YD repeat protein [Clostridium thermocellum DSM 1313]
          Length = 1765

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 19/178 (10%)

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---- 322
             +G         D A ++ S    +  T R T      +S    PD  +I F+ DR    
Sbjct: 1167 PDGTNIKY--DYDYAGNLVSTTDGNGNTTRYTYNSLNLLSEIIDPDGRKITFKYDRQGRV 1224

Query: 323  ------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                  +G+   Y   ++ +   R   ++E       ++  G L A    SG        
Sbjct: 1225 VRMIGKDGRSTYYTYNADNNITGR--WEEEGQMEKYEYNVDGSLAA--SISGTTIHTYAY 1280

Query: 377  KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               G  +        +    ++ +G   + S+  D       Y+ D+ GR  T+ N  
Sbjct: 1281 TLAGRLKSKTTNGQKVLEYDYNKNG---LVSKVTDISGTPVEYTYDVLGRLTTVTNGG 1335


>gi|330906298|ref|XP_003295422.1| hypothetical protein PTT_00911 [Pyrenophora teres f. teres 0-1]
 gi|311333294|gb|EFQ96475.1| hypothetical protein PTT_00911 [Pyrenophora teres f. teres 0-1]
          Length = 330

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 62/198 (31%), Gaps = 26/198 (13%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY----- 309
           N    I A   S++G+    S   +  ++++S++                   S+     
Sbjct: 121 NKPGEIWAIALSADGQYLA-STSINGKINVWSLNKDEGMPR----IREYETKGSFGLCVD 175

Query: 310 -SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S + S   F +       +YV  +                    +SP   L+A     G
Sbjct: 176 LSRNGS---FTASGHENGSIYVFNNETGRLAHSLAGLVHPVRSVAFSPASKLLA---AGG 229

Query: 369 EKFAIGVMKKDGSQERL--LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +   I +      ++          + +  WS +G  L+       D+ +K++ I     
Sbjct: 230 DARIIALYDVTSGEQVANFTGHGGWVLSLDWSDTGEYLLSGSH---DSKAKVWRI----E 282

Query: 427 NETLINTPAYASDPQWVG 444
             T + T ++   P W  
Sbjct: 283 TRTCVATHSHGDKPLWSA 300


>gi|307109296|gb|EFN57534.1| hypothetical protein CHLNCDRAFT_21248 [Chlorella variabilis]
          Length = 917

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/223 (17%), Positives = 73/223 (32%), Gaps = 11/223 (4%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +                +    +SP+   +A A  D +    V +          
Sbjct: 364 QLLVWEWRSETYVLKQQGHYYDVAASAYSPDGTYLATAADDAK----VKVWTLSNGFCFV 419

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYS 310
              +  + + A +F  +G  A++S   D  +  + + ++      LT    +  +S +  
Sbjct: 420 TFSDHEAPVTAVQFLGSG-HAVLSASLDGTVRAFDL-VRYRNFRTLTTPTPVQFVSLACD 477

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P   ++V    R+   Q++V          +    E       + P   L+A   +    
Sbjct: 478 PAG-EVVCAGSRD-TFQVFVWSLKTGRLLEVLAAHEGPVVALQFCPGTPLLASASWDKTV 535

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
               V    G+ E  L    ++ A  W P G+ L  S   DG 
Sbjct: 536 RTWDVFNGKGAVE-ALQHQHDVLALAWRPDGKQLA-SSTLDGQ 576


>gi|301765164|ref|XP_002918010.1| PREDICTED: autophagy-related protein 16-1-like [Ailuropoda
           melanoleuca]
          Length = 602

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 62/323 (19%), Positives = 115/323 (35%), Gaps = 55/323 (17%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K  +      S A    I     D    
Sbjct: 326 SPGSRLLATG-----GMDR---RVKLWEVFGDKCELKGSLSGSNAGITSIEF---DSAGS 374

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 375 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 416

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 417 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 468

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +T R    L    +   +P+ ++++  S     + L ++     +  R +  
Sbjct: 469 W--DIRSESTVREMELLGKITALDLNPERTELLSCSR---DDLLKIIDLR-INAVRQTFS 522

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 523 APGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSV--LSGKVEKVLSKQHGSSINAVAW 580

Query: 398 SPSGRSLIFSRKKDGDTGSKLYS 420
           SPSG  ++     D  + + L+S
Sbjct: 581 SPSGSHVV---SVDKGSKAVLWS 600


>gi|302309425|ref|NP_986834.2| AGR168Wp [Ashbya gossypii ATCC 10895]
 gi|299788353|gb|AAS54658.2| AGR168Wp [Ashbya gossypii ATCC 10895]
          Length = 825

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 76/229 (33%), Gaps = 36/229 (15%)

Query: 220 SPNQQKVAYATYDDE-DILRV----------YLMDTRIDRAPKRIGN---FRSMILAPRF 265
           S + Q+VA    D +  I  V               R ++  K + N       + A +F
Sbjct: 26  SSDGQRVATGGLDGKIRIWSVADILVFAKPKVSWPAREEQLRKPLANMSRHTGSVTALKF 85

Query: 266 SSNGK--------RALISVQKDEAMDIYSVDLQS-----NATERLTNTLFINISASYSPD 312
           S + K        + L+  +K+E       D+++     N   RL           ++PD
Sbjct: 86  SPDNKYLASGSDDKILLIWEKEEGAVQPLFDMENDLEHWNVRRRLVAHDNDIQDICWAPD 145

Query: 313 SSQIVFES-DRE-----GK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           SS +V    DR      G   E++     + S  K +  D    YF    S    +  F 
Sbjct: 146 SSILVTVGLDRSIIVWNGSTFEKIKRFDVHQSHVKGVVFDPANKYFATA-SDDRTVKVFR 204

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
              G   +  +        +     +  +  +WSP G+ +      +G 
Sbjct: 205 YHKGTDLSFTIEHIITEPFQGSPLTTYFRRLSWSPDGQHIAVPNATNGP 253



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 41/133 (30%), Gaps = 19/133 (14%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D +  N+R    + D  + +  ++P+   +     D      + + +       KR    
Sbjct: 120 DLEHWNVRRRLVAHDNDIQDICWAPDSSILVTVGLDR----SIIVWNGSTFEKIKRFDVH 175

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINISA----- 307
           +S +    F    K    +   D  + ++      DL       +T       S      
Sbjct: 176 QSHVKGVVFDPANKYFA-TASDDRTVKVFRYHKGTDLSFTIEHIITEP--FQGSPLTTYF 232

Query: 308 ---SYSPDSSQIV 317
              S+SPD   I 
Sbjct: 233 RRLSWSPDGQHIA 245


>gi|281345066|gb|EFB20650.1| hypothetical protein PANDA_006376 [Ailuropoda melanoleuca]
          Length = 584

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 62/323 (19%), Positives = 115/323 (35%), Gaps = 55/323 (17%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K  +      S A    I     D    
Sbjct: 308 SPGSRLLATG-----GMDR---RVKLWEVFGDKCELKGSLSGSNAGITSIEF---DSAGS 356

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 357 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 398

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 399 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 450

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +T R    L    +   +P+ ++++  S     + L ++     +  R +  
Sbjct: 451 W--DIRSESTVREMELLGKITALDLNPERTELLSCSR---DDLLKIIDLR-INAVRQTFS 504

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 505 APGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSV--LSGKVEKVLSKQHGSSINAVAW 562

Query: 398 SPSGRSLIFSRKKDGDTGSKLYS 420
           SPSG  ++     D  + + L+S
Sbjct: 563 SPSGSHVV---SVDKGSKAVLWS 582


>gi|206560777|ref|YP_002231542.1| hypothetical protein BCAL2418 [Burkholderia cenocepacia J2315]
 gi|198036819|emb|CAR52719.1| putative exported protein [Burkholderia cenocepacia J2315]
          Length = 390

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 48/345 (13%), Positives = 101/345 (29%), Gaps = 33/345 (9%)

Query: 91  ITNPDSIPRFQDWNSLGAQV---LVTGRVIKEGKDRLRVEFRLWDVKDRKQ-IIGKKFFS 146
           + +  +   F   +S  A     L+ G     G D + V +R +D K      +      
Sbjct: 7   VLSLSATHAFAQQSSAPADGVYNLLVGTYTGGGSDGIYV-YR-FDTKTGGVAPVSSAKTE 64

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRY 205
           +P+         +      + G+ G    R    +          + +  +  +G +  Y
Sbjct: 65  NPSYLLPSRDGRTVYAVNELPGDNGPATQRGGVSAFRFDAKTGALSFIDRVSSEGNDPCY 124

Query: 206 LTPSRDQ-----ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           L  S D        +     P      +   DD  + +  L        P +     + +
Sbjct: 125 LALSPDGKYLVTANYSVAADPGGSFAVFPLRDDGAVGQAVLTVHHEGTGPVKGRQDGAHV 184

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISA-------SYSPD 312
            +  FS +G+   +     + +  Y   +         T   +  + A        +S D
Sbjct: 185 HSTVFSPDGRYLFVQDLGADKIYGYRYTVDGSRGLISPTEARYTPVKAGSGPRHMVFSAD 244

Query: 313 SSQIVFESDREGKEQLY------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
                  S+     +++      +               +        SP G  + +   
Sbjct: 245 GRFAYVTSELNASVEVFGYHDGKLTPIETLPMTAPGFKGKVGGGAIHLSPDGRFL-YASN 303

Query: 367 SGEKFAI---GVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLI 405
            G+   +    V K DG  + +  + S  + P      P+G+ LI
Sbjct: 304 RGDANDLVIYAVNKADGRLKHVGRQSSLGKTPREFLIDPTGKWLI 348


>gi|195483619|ref|XP_002090361.1| GE12842 [Drosophila yakuba]
 gi|194176462|gb|EDW90073.1| GE12842 [Drosophila yakuba]
          Length = 949

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 68/229 (29%), Gaps = 22/229 (9%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +                +    +S + Q +A    D +    V L +T+      
Sbjct: 374 QLLVWEWQSEQYIMKQQGHSSEMTCIAYSSDGQFIATGGEDSK----VKLWNTQSSFCFV 429

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-------FIN 304
                 S +   +FS N K+ L+S   D  +  + ++ +       T+          ++
Sbjct: 430 TFSEHTSGVTGIQFSRN-KKFLVSSSLDGTVRAFDIN-RYRNFRTFTSPNPAQFSCVAVD 487

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S        Q VF         +++          I    E       +SP        
Sbjct: 488 YSGELVVAGGQDVF--------DIFLWSVKTGKLLEIISGHEGPVVSIAFSPVATSSTLV 539

Query: 365 KFS-GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             S  +   I    +  S+   +   S++   T+SP+G  +  +     
Sbjct: 540 SGSWDKTVKIWNCLESNSEHETIDAVSDVTNVTFSPNGEEIAVATLSGN 588



 Score = 37.7 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 44/106 (41%), Gaps = 6/106 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T++ N +  ++PD + ++      G  ++ V     +  + +S +   +Y +   SP G 
Sbjct: 13  TIYRNGNLVFTPDGNSVI---SPVGN-RITVYDLKNNKSRTLSLESRYNYTNLALSPDGS 68

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           L+     +GE   I ++       R   +   +Q   +SP+G    
Sbjct: 69  LLIAVNETGEAQLISMVSC-TVIHRHKFQMG-VQCICFSPNGAFFA 112


>gi|188577528|ref|YP_001914457.1| peptidase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188521980|gb|ACD59925.1| peptidase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 756

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 9/106 (8%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
           D +QIV+ S+R+G E LY+      +  ++I++                 + FT      
Sbjct: 350 DGAQIVWASERDGWEDLYLYDGRSGEVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 409

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSR 408
                      +  DGS    L   +      +SP G+ +  ++SR
Sbjct: 410 GEDPYDRHAYRIGLDGSGLTALTPVAADHEVRYSPDGKWMLDLYSR 455



 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 51/129 (39%), Gaps = 12/129 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA-SYSPDSSQIVFESD--RE 323
           +G + + + ++D   D+Y  D +S     ++T   ++          + Q+ F +   + 
Sbjct: 350 DGAQIVWASERDGWEDLYLYDGRSGEVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 409

Query: 324 GKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMK 377
           G++      Y +  +GS    ++    A+  +  +SP G  +   +++            
Sbjct: 410 GEDPYDRHAYRIGLDGSGLTALTPV--AADHEVRYSPDGKWMLDLYSRVDLGPVLELRRS 467

Query: 378 KDGSQERLL 386
            DGS  R +
Sbjct: 468 ADGSLARTV 476


>gi|168700153|ref|ZP_02732430.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 307

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 65/204 (31%), Gaps = 22/204 (10%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF--RSMILAPRFSSNGKRALISVQKD 279
           N+Q VA  T D        L    +    K+  +F   + +     S + K         
Sbjct: 116 NEQTVAVGTGDRFKASGGALEIWDVSNDRKQSPHFTEPNGVRTIAVSPSKKIVAW---GT 172

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASY--SPDSSQIVFESDREGKEQLYVMQSNGSD 337
               +   D+ +   + +T     +   +   S D S +   SDR  K    +       
Sbjct: 173 GHRKVRVWDITT--PKPMTEFPQASDCPAIALSSDGSVLAVASDRSTK----LYDLRAKR 226

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAP 395
           ++ + +  +       +SP G  +A   F    F + +       ER     +   +   
Sbjct: 227 ERAVLKGHKGQVLCVAFSPDGRTVATGSFD---FTVRLWDVATGNERASFKWDIGRVYCV 283

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLY 419
           +++P G  L       GD G  + 
Sbjct: 284 SYAPDGFRLA----AGGDLGRVVV 303



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 53/175 (30%), Gaps = 19/175 (10%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
              T   G     +    + V  G     + V D          P           S + 
Sbjct: 148 PHFTEPNGVRTIAVSPSKKIVAWGTGHRKVRVWDITTPKPMTEFPQASD-CPAIALSSDG 206

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
             +A A+          L D R  R    +   +  +L   FS +G+    +   D  + 
Sbjct: 207 SVLAVASDRSTK-----LYDLRAKRERAVLKGHKGQVLCVAFSPDGRTVA-TGSFDFTVR 260

Query: 284 IYSVDLQSNATERLTNTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSN 334
           ++  D+ +        +   +I      SY+PD  ++    D     ++ V  ++
Sbjct: 261 LW--DVATGNER---ASFKWDIGRVYCVSYAPDGFRLAAGGDLG---RVVVWDAD 307


>gi|121702031|ref|XP_001269280.1| histone transcription regulator Hir1, putative [Aspergillus
           clavatus NRRL 1]
 gi|119397423|gb|EAW07854.1| histone transcription regulator Hir1, putative [Aspergillus
           clavatus NRRL 1]
          Length = 1062

 Score = 46.6 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 72/241 (29%), Gaps = 48/241 (19%)

Query: 220 SPNQQKVA------YATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGK 270
           SP+  ++       Y      + +            P+++    N    I   RFS NGK
Sbjct: 26  SPDGSRLVTAAGDGYVRIWSTEAIY-NTGAPEYAGKPRQLASMSNHSGTIHTVRFSPNGK 84

Query: 271 RALISVQKDEAMDIYSVDLQ------------------SNATERLTNTLFINISASYSPD 312
               S   D+ + IY++D                         RL           +S D
Sbjct: 85  YLA-SGADDKIVCIYTLDANPPSHASTFGSNEAPPVENWRTIRRLIGHDNDVQDLGWSYD 143

Query: 313 SS---------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           SS         ++V  S     E+L  +  + S  K I+ D    YF    S    +  F
Sbjct: 144 SSILVSVGLDSKVVVWSGHT-FEKLKTLSIHQSHVKGITFDPANKYFATA-SDDRTVRIF 201

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFSRKKDGDTG 415
              S    +    + +       +      +P        +WSP G  +  +   +G   
Sbjct: 202 RFTSPSPSSTAHDQMNNFVLEQTITAPFQNSPLTAYFRRCSWSPDGMHIAAANAVNGPVS 261

Query: 416 S 416
           S
Sbjct: 262 S 262



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 38/271 (14%), Positives = 90/271 (33%), Gaps = 46/271 (16%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT-PSRDQILFEPRFSPNQ 223
            +    GD   RI        +G  + +       G   +  +  +    +   RFSPN 
Sbjct: 31  RLVTAAGDGYVRIWSTEAIYNTGAPEYA-------GKPRQLASMSNHSGTIHTVRFSPNG 83

Query: 224 QKVAYATYDDEDILRVYLMD-----------------TRIDRAPKRIGNFRSMILAPRFS 266
           + +A  +  D+ I+ +Y +D                     R  +R+    + +    +S
Sbjct: 84  KYLA--SGADDKIVCIYTLDANPPSHASTFGSNEAPPVENWRTIRRLIGHDNDVQDLGWS 141

Query: 267 SNGKRA--------LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            +            ++         + ++ +  +  + +T        A+ S D +  +F
Sbjct: 142 YDSSILVSVGLDSKVVVWSGHTFEKLKTLSIHQSHVKGITFDPANKYFATASDDRTVRIF 201

Query: 319 -------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEK 370
                   S    +   +V++   +   + S    A +    WSP G  IA     +G  
Sbjct: 202 RFTSPSPSSTAHDQMNNFVLEQTITAPFQNSPLT-AYFRRCSWSPDGMHIAAANAVNGPV 260

Query: 371 FAIGVMKKDG--SQERLLVEDSNLQAPTWSP 399
            ++ ++ +        L+  ++ ++   +SP
Sbjct: 261 SSVAIINRGSWDGDINLIGHEAPVEVCAFSP 291


>gi|328768060|gb|EGF78107.1| hypothetical protein BATDEDRAFT_17457 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 621

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 81/227 (35%), Gaps = 27/227 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMD--TRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           ++S +   +A  T   +  + VY +     +D+   ++ N +S      +S +  R    
Sbjct: 228 KWSFDSSYIARMTTGPQGGISVYELPEMGLLDKKSIKVENIQSFD----WSPSSNRLGFW 283

Query: 276 VQKDEAM--DIYSVDLQSNATERLTNTLF--INISASYSPDSSQIVFESDREGKE----- 326
             +   +   +  +++ S    R T  LF  I+   S+  D + ++ +  R+  +     
Sbjct: 284 TPESGNIPARVTVIEMPSRKITR-TKNLFGVIDCKLSWQNDGAYVLVQITRQKTKKQTVT 342

Query: 327 --QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD----- 379
             +++ M         +   +        W P G+  A      +K  I   + +     
Sbjct: 343 SFEIFRMNEKEIPVDVVEHKQTEDVMSTFWEPHGNRFAVLSTEAQKTFINFYEVEPHTST 402

Query: 380 ----GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               G++     E   +   +WSP GR  + +  +      + + +D
Sbjct: 403 SANIGTKLLKSQEVKGINQISWSPKGRFCVLAGLRGMQGDLQFWDVD 449



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 47/302 (15%), Positives = 101/302 (33%), Gaps = 34/302 (11%)

Query: 127 EFRLWDVKDRKQI--IGKKFFS-SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES 183
            F +WDV   +Q+   G +    +P   R      +  I       K  F+S  +    +
Sbjct: 185 HFIVWDVSTGRQLRTFGNEGTGINPNEPRSGP---ATTIKIDWPVFKWSFDSSYIARMTT 241

Query: 184 VVSGIIK-NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
              G I    L  M      +      + + +    +SP+  ++ + T +  +I     +
Sbjct: 242 GPQGGISVYELPEM-----GLLDKKSIKVENIQSFDWSPSSNRLGFWTPESGNIPARVTV 296

Query: 243 DTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKD-------EAMDIYSVDLQSNAT 294
                R   R  N   +I     + ++G   L+ + +         + +I+ ++ +    
Sbjct: 297 IEMPSRKITRTKNLFGVIDCKLSWQNDGAYVLVQITRQKTKKQTVTSFEIFRMNEKEIPV 356

Query: 295 ERLTNTLFINI-SASYSPDSSQIVFESDREGKE--QLYVMQSNGS-----DQKRISQDKE 346
           + + +    ++ S  + P  ++    S    K     Y ++ + S       K +   + 
Sbjct: 357 DVVEHKQTEDVMSTFWEPHGNRFAVLSTEAQKTFINFYEVEPHTSTSANIGTKLLKSQEV 416

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRS 403
                  WSP+G         G +  +     D     +L    +    T   W P+GR 
Sbjct: 417 KGINQISWSPKGRFCVLAGLRGMQGDLQFWDVD--DLTIL-NTGDHYMCTDIEWDPTGRY 473

Query: 404 LI 405
           L+
Sbjct: 474 LV 475


>gi|326532518|dbj|BAK05188.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 883

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 73/219 (33%), Gaps = 20/219 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + +   +    + +      ++ + RF P+  ++A +++D    +RV+ +D +
Sbjct: 622 TGGHDKKVVLWHAETLKQKAVLEEHSLLITDVRFGPSIPRIATSSFD--KTVRVWDVDNQ 679

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            D          + +++  F  N    + S   +  + ++S+     A     N    + 
Sbjct: 680 -DDTVHTFTGHSASVMSVDFHPNKDDLICSCDGNGEIRLWSIS-NGRAVR---NFKGGSS 734

Query: 306 SASYSPD-SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              + P     +   S+      + ++        RI +          WSP GD +  T
Sbjct: 735 QLRFQPRLGGFLAAASE----NVVSILDVETQACVRIFEGHTGHVDSLCWSPTGDYVVST 790

Query: 365 KFSGEKFAIGVMKKDGSQER----LLVEDSNLQAPTWSP 399
                   + V   +   E     L    S   +  + P
Sbjct: 791 SED----TVKVWSVNSGNENCVQELNSTGSKFHSCAFHP 825



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 44/277 (15%), Positives = 102/277 (36%), Gaps = 24/277 (8%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK-NSLCVMDRDGANIRYLTPSRDQIL 214
           + I+D     +  +    ++   F+S +  +G    +S C+    G   R ++ +R    
Sbjct: 549 NQIAD--MDRLVEDDSLGDNVDSFLSHNDAAGPSDGHSRCMASSKGFTFREISSARASTN 606

Query: 215 FEPR--FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
                 FS + + +A   +D +    V L      +    +     +I   RF  +  R 
Sbjct: 607 KVVCCHFSSDGKLLATGGHDKK----VVLWHAETLKQKAVLEEHSLLITDVRFGPSIPRI 662

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +   D+ + ++ VD Q +     T      +S  + P+   ++   D  G+ +L+ + 
Sbjct: 663 A-TSSFDKTVRVWDVDNQDDTVHTFTGHSASVMSVDFHPNKDDLICSCDGNGEIRLWSIS 721

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DS 390
            NG   +          F P     G  +A    +     + ++  +      + E    
Sbjct: 722 -NGRAVRNFKGGSSQLRFQPRL---GGFLAAASEN----VVSILDVETQACVRIFEGHTG 773

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           ++ +  WSP+G  ++ +     +   K++S++    N
Sbjct: 774 HVDSLCWSPTGDYVVSTS----EDTVKVWSVNSGNEN 806


>gi|323448142|gb|EGB04045.1| hypothetical protein AURANDRAFT_59550 [Aureococcus anophagefferens]
          Length = 498

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 17/126 (13%)

Query: 205 YLTPSRDQILFEPRFSPNQQ---------KVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            L  +  + ++  R+SP            ++A A++D      V L DT I      + N
Sbjct: 369 QLGHNHTEEIYTIRWSPTGPTTALPNAPCRLASASFDA----TVRLWDTEIGVCSHTLRN 424

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSS 314
               +    FS NG     S      ++I+SV  ++    R  N    +I   +++ + +
Sbjct: 425 HTKKVYTIAFSPNGDLLA-SGSLGGQLNIWSV--KTGILVRTFNQGSADIFEVAWNANGT 481

Query: 315 QIVFES 320
           ++   S
Sbjct: 482 RLAATS 487



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 38/275 (13%), Positives = 81/275 (29%), Gaps = 50/275 (18%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            +  RDG     L    + I    RF    +++   +YD      V + D    +   + 
Sbjct: 226 RLWSRDGILQHSLAAHSESIFSL-RFDAVGKRLLTGSYDK----CVSVWDVATGKLQHKF 280

Query: 254 GNFRSMILAPRF--------------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
               + +L   +              S++ +   +    D+     S    +    ++  
Sbjct: 281 EAHSAQVLDVDWKHGGYHGRDVFASCSTD-RTIAVCALADDNAVAGS-PATTTTPLQVLV 338

Query: 300 TLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                ++A  + P  S +   SD +    ++ +  N +++           +   WSP G
Sbjct: 339 GHADEVNAIRWDPSGSLLASCSD-DHNVLIWQLGHNHTEE----------IYTIRWSPTG 387

Query: 359 ---------DLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSNLQAPTWSPSGRSLIFS 407
                      +A   F      + +   +       L      +    +SP+G  L  S
Sbjct: 388 PTTALPNAPCRLASASFDAT---VRLWDTEIGVCSHTLRNHTKKVYTIAFSPNGDLLA-S 443

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
               G     ++S+       T     A   +  W
Sbjct: 444 GSLGGQ--LNIWSVKTGILVRTFNQGSADIFEVAW 476


>gi|302663587|ref|XP_003023434.1| hypothetical protein TRV_02418 [Trichophyton verrucosum HKI 0517]
 gi|306755792|sp|D4D5P5|DPP5_TRIVH RecName: Full=Probable dipeptidyl-peptidase 5; AltName:
           Full=Dipeptidyl-peptidase V; Short=DPP V; Short=DppV;
           Flags: Precursor
 gi|291187431|gb|EFE42816.1| hypothetical protein TRV_02418 [Trichophyton verrucosum HKI 0517]
          Length = 726

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 37/237 (15%), Positives = 75/237 (31%), Gaps = 37/237 (15%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S  IY S+      +++ +     +V SG +  +      DG     + P +      P 
Sbjct: 166 SARIYDSLFVRH--WDTYVGTQFNAVFSGALTKNGDKYSFDGKLKNLVQPVKYAESPYPP 223

Query: 219 F--------SPNQQKVAYAT---------------YDDEDILRVYLMDTRIDRAPKRIGN 255
           F        S + + VA+ +               +                  P+    
Sbjct: 224 FGGSGDYDLSSDGKTVAFMSKAPELPKANLTTSYIFLVPHDGSRVAEPINKRNGPRTPQG 283

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISAS-- 308
                 +P FS +GKR        +  +     I+  ++ SN   +   +   + S    
Sbjct: 284 IEGASSSPVFSPDGKRIAYLQMATKNYESDRRVIHIAEVGSNKPVQRIASN-WDRSPEAV 342

Query: 309 -YSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLI 361
            +S D   +   ++     +L+ + ++  D    + +  D   S F  V S +  LI
Sbjct: 343 KWSSDGRTLYVTAEDHATGKLFTLPADARDNHKPEVVKHDGSVSSFYFVGSSKSVLI 399



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 73/203 (35%), Gaps = 29/203 (14%)

Query: 265 FSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTL----------FINISA 307
            SS+GK      +  E          I+ V    +      N              + S 
Sbjct: 232 LSSDGKTVAFMSKAPELPKANLTTSYIFLVPHDGSRVAEPINKRNGPRTPQGIEGASSSP 291

Query: 308 SYSPDSSQIVF----ESDREGKEQLYVMQSNGSD--QKRISQDKEASYFDPVWSPQGDLI 361
            +SPD  +I +      + E   ++  +   GS+   +RI+ + + S     WS  G  +
Sbjct: 292 VFSPDGKRIAYLQMATKNYESDRRVIHIAEVGSNKPVQRIASNWDRSPEAVKWSSDGRTL 351

Query: 362 AFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             T     +G+ F +    +D  +  ++  D ++ +  +  S +S++ S        + L
Sbjct: 352 YVTAEDHATGKLFTLPADARDNHKPEVVKHDGSVSSFYFVGSSKSVLISGNS--LWSNAL 409

Query: 419 YSIDLNGRNETLINTPAYASDPQ 441
           + +   GR    +   A   DP+
Sbjct: 410 FQVATPGRPNRKLFY-ANEHDPE 431



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/271 (12%), Positives = 78/271 (28%), Gaps = 40/271 (14%)

Query: 211 DQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           D  + E  +  +  KV Y   T   +  + +++ D +      + G+        + + +
Sbjct: 77  DSDVSEITWLGDGTKVVYVNGTDSVKGGVGIWISDAKNFGNAYKAGSVNGAFSGLKLAKS 136

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE----RLTNTLFINISASYSPDSSQIVFESDREG 324
           G +                +  +        R+ ++LF+    +Y       VF      
Sbjct: 137 GDKINFVGYGQSTTKGDLYNEAAAKEAVSSARIYDSLFVRHWDTYVGTQFNAVFSGALTK 196

Query: 325 KEQLYVMQSNGSDQKRIS------QDKEASYFDPVWSPQGDLIAFTKFSGE-------KF 371
               Y       +  +                D   S  G  +AF   + E         
Sbjct: 197 NGDKYSFDGKLKNLVQPVKYAESPYPPFGGSGDYDLSSDGKTVAFMSKAPELPKANLTTS 256

Query: 372 AIGVMKKDGSQERLLVE-----------DSNLQAPTWSPSGRSLIFSR-----KKDGDTG 415
            I ++  DGS+    +            +    +P +SP G+ + + +      +     
Sbjct: 257 YIFLVPHDGSRVAEPINKRNGPRTPQGIEGASSSPVFSPDGKRIAYLQMATKNYESDRRV 316

Query: 416 SKLYSIDLNGRNETLINTPAYASDP---QWV 443
             +  +  N   + + +   +   P   +W 
Sbjct: 317 IHIAEVGSNKPVQRIASN--WDRSPEAVKWS 345


>gi|170749127|ref|YP_001755387.1| YVTN beta-propeller repeat-containing protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655649|gb|ACB24704.1| 40-residue YVTN family beta-propeller repeat protein
           [Methylobacterium radiotolerans JCM 2831]
          Length = 327

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 63/205 (30%), Gaps = 33/205 (16%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P     AY T +  + + V    T    A  ++G     +     S +GK   +    D+
Sbjct: 23  PAAAFTAYVTNEKGNSVSVIDTATMAVTATWKVGRRPRGV---TVSKDGKELFVCASDDD 79

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            +D   +D  +    R         S    PD  Q  F  D  G   LYV   + S    
Sbjct: 80  RID--VLDTSTGKVVR---------SLRSGPDPEQ--FILDASGNP-LYVANEDDSQVTI 125

Query: 341 ISQDKEASYFDPVW---------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
           I  +K     +            SP G ++  T  +           D    +++     
Sbjct: 126 IDIEKNKVLAEVPVGVEPEGMGLSPDGKILVNTSETTNMAHF----IDTKTFQVIDNVLV 181

Query: 392 LQAPTWS---PSGRSLIFSRKKDGD 413
              P ++     G+ L  S +  G 
Sbjct: 182 DARPRFAEFTADGKYLWVSAEVGGT 206


>gi|168025402|ref|XP_001765223.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162683542|gb|EDQ69951.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 464

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 73/192 (38%), Gaps = 15/192 (7%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+ +   Y          V            +I      I+  R+S + +  L + + 
Sbjct: 55  WAPDSE---YLLCGLFKRAVVQAWSVSQPEWTCKIDEGSIGIVHARWSPDSRHILTTSEF 111

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++S  L S A   +        + S+S D   I   + R+ ++ ++++   G + 
Sbjct: 112 QLRLTVWS--LVSTACVHVPWPKHSTKAVSFSKDGKYIAIGTRRDCRDYIHLLACQGWEA 169

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ----- 393
               +   + + D  WSP    +A    S  ++ + +   DG   R L + +  +     
Sbjct: 170 MGNFEVGTSDFADLEWSPNDSTVA-VWDSPLEYKVLIYSPDG---RCLFKYAAYENALGV 225

Query: 394 -APTWSPSGRSL 404
            + TWSP G+ L
Sbjct: 226 KSVTWSPCGQFL 237



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 55/165 (33%), Gaps = 13/165 (7%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
                 +   R+SP+ + +   +   E  LR+ +           +   +    A  FS 
Sbjct: 87  DEGSIGIVHARWSPDSRHILTTS---EFQLRLTVWSLVSTACVH-VPWPKHSTKAVSFSK 142

Query: 268 NGKRALISVQKDEAMDIYSVDLQS----NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           +GK   I  ++D    I+ +  Q        E  T+         +SP+ S +    D  
Sbjct: 143 DGKYIAIGTRRDCRDYIHLLACQGWEAMGNFEVGTSDFA---DLEWSPNDSTVA-VWDSP 198

Query: 324 GKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            + ++ +   +G    K  + +         WSP G  +    + 
Sbjct: 199 LEYKVLIYSPDGRCLFKYAAYENALGVKSVTWSPCGQFLGVGSYD 243


>gi|150009121|ref|YP_001303864.1| putative alanyl dipeptidyl peptidase [Parabacteroides distasonis
           ATCC 8503]
 gi|149937545|gb|ABR44242.1| putative alanyl dipeptidyl peptidase [Parabacteroides distasonis
           ATCC 8503]
          Length = 827

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 44/339 (12%), Positives = 99/339 (29%), Gaps = 72/339 (21%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF----------------SSPASWR 152
             +VT  V  E        + L DV D K+I                         +S+ 
Sbjct: 168 DAVVTATVNPEK------RYTLSDVFDGKRIQSASLSPNGKFIIVSYQETYPGGKQSSFT 221

Query: 153 KIAHTIS-DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           +I    +   + ++    +    S + + +   + G    +L     D  + +    S  
Sbjct: 222 QILDKATGSVLVENGQSLRWMPKSNLAYYTRKGMKGTELVTL-----DPTSKKENILSSQ 276

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------------------- 251
                  F P +  + ++  +     R  + +  +    +                    
Sbjct: 277 LPEGSFSFGPTEDYLLFSIREKGPQERKEIQEILVPDDRQPGWRNRMFIHKYDLRTGLFQ 336

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLTNTLFIN 304
           R+    +       S +G   L S ++            IY +DL++   + L       
Sbjct: 337 RLTYGHTSTYINDVSQDGHYLLFSRREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFV 396

Query: 305 ISASYSPDSSQI-------VF----------ESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             A +SPD++Q+        F          ++      QL++        K +++D + 
Sbjct: 397 SRAVFSPDATQLLVDASGEAFDGIGLKIKEGQTSNTSDGQLFLYNIADKSIKPLTKDFDP 456

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           S     W+     I       ++  +  +     + + L
Sbjct: 457 SVDSYEWNALDKQIYIMAKDKDRVRMYSLNPSNGKIKQL 495



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 43/276 (15%), Positives = 86/276 (31%), Gaps = 53/276 (19%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I+YL+ S  +   +  F+P  +K A  T       R  L D    +  +          +
Sbjct: 147 IKYLSESHKENALKASFNP--EKDAVVTATVNPEKRYTLSDVFDGKRIQ----------S 194

Query: 263 PRFSSNGKRALISVQKD-----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              S NGK  ++S Q+      ++     +D  + +   + N   +     + P S+   
Sbjct: 195 ASLSPNGKFIIVSYQETYPGGKQSSFTQILDKATGSV-LVENGQSL----RWMPKSNLAY 249

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-------- 369
           +        +L  +      +  +S       F   + P  D + F+             
Sbjct: 250 YTRKGMKGTELVTLDPTSKKENILSSQLPEGSF--SFGPTEDYLLFSIREKGPQERKEIQ 307

Query: 370 --------------KFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDG-- 412
                         +  I          + L    ++      S  G  L+FSR++    
Sbjct: 308 EILVPDDRQPGWRNRMFIHKYDLRTGLFQRLTYGHTSTYINDVSQDGHYLLFSRREPNLT 367

Query: 413 ---DTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
               + + +Y +DL     +TLI    + S   +  
Sbjct: 368 ERPFSRTYIYKMDLRTMHVDTLIKGEKFVSRAVFSP 403


>gi|91776476|ref|YP_546232.1| YVTN beta-propeller repeat-containing protein [Methylobacillus
           flagellatus KT]
 gi|91710463|gb|ABE50391.1| 40-residue YVTN beta-propeller repeat [Methylobacillus flagellatus
           KT]
          Length = 320

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/186 (13%), Positives = 58/186 (31%), Gaps = 11/186 (5%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           N     +    S + +        ++   +       +    ++         + SPD S
Sbjct: 93  NIAGSPVGIALSPDSQTL-YVADWNDNRVLAIDTADPSQRREVSIGKAP-AGITVSPDGS 150

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++ + ++R+  +   +   +    +R++  +    F     P G  I          ++ 
Sbjct: 151 KL-YVANRDSNDLAIIDTQSLQVLQRVATGEHP--FGITLGPDGRQILAVNVYAN--SLS 205

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           V+  +  Q R +    +      SP  R   +      DT S    IDL    ET   + 
Sbjct: 206 VIDLETLQTRTIPVGEHPYCVAVSPDSRY-AYVTNTQADTVS---VIDLEQNKETTRISV 261

Query: 435 AYASDP 440
               + 
Sbjct: 262 GGFPEG 267


>gi|310798993|gb|EFQ33886.1| WD domain-containing protein [Glomerella graminicola M1.001]
          Length = 516

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/317 (12%), Positives = 96/317 (30%), Gaps = 61/317 (19%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           ++AH I         GE           S+ + +G    +  + D +    ++       
Sbjct: 137 RMAHRIP------GHGEAILAAQFSPETSKRLATGGGDKTARIWDTETGTPKFTLAGHAG 190

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS----- 267
            +    +S + +++A  + D    +R++  DT      + +      +    +       
Sbjct: 191 WVLCVAWSADGRRLATGSMD--KTVRLWNPDTGA-AVGQPLAGHAKWVTNIAWEPYHLWR 247

Query: 268 -NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +  R   S  KD  + I+ V+        L+          +    + +V+    +   
Sbjct: 248 DDTPRLA-SASKDATVRIWVVN-TGRTEHVLSGHKSSVSCVKWG--GTGLVYTGSHDKTV 303

Query: 327 QLYVMQSNGSDQKRIS--------------QDKEASYFDPVWSPQGD------------- 359
           +++     G+    +S                    +FD   +P G+             
Sbjct: 304 KVWDA-VKGTLVHTLSSHAHWVNHLALSTEFALRTGFFDHTPTPDGEDARRAKAKERFEK 362

Query: 360 ------LIAFTKFS-GEKFAIGVMKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                  +A    S  + F + +           R+L     +   T+SP G  +     
Sbjct: 363 AARLQGKVAERLVSASDDFTMYLWDPSQGTKPVARMLGHQKQVNHVTFSPDGTLIA---S 419

Query: 410 KDGDTGSKLYSIDLNGR 426
              D  +K++S   +G+
Sbjct: 420 AGWDNHTKIWSAR-DGK 435


>gi|302791119|ref|XP_002977326.1| hypothetical protein SELMODRAFT_107193 [Selaginella moellendorffii]
 gi|300154696|gb|EFJ21330.1| hypothetical protein SELMODRAFT_107193 [Selaginella moellendorffii]
          Length = 744

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 78/266 (29%), Gaps = 66/266 (24%)

Query: 190 KNSLCVMDRDGA----NIRYLTPSRDQILFEPRFS--PNQQKVAYATYDDEDILRVYLMD 243
             ++   +RDG     NI  ++           ++   +   +   +  D        + 
Sbjct: 19  DYAIWCWNRDGKPILKNIDSISTDLQCYPLTSHWNRTGSGSDIFVVSCIDGS----LHIS 74

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R  +  KR+      IL  R+S++   AL +  +D  + I+S          L  +   
Sbjct: 75  NRTGKEEKRVQAHAGSILCVRWSTDAGSALATGGEDGIVKIWSC--SGMLRSTLAQSPCP 132

Query: 304 NISASYSPDSSQIVFE----------------SDREGKEQLYVMQSNGSDQKRISQDKEA 347
             + ++SP S Q++F                 S  +G   L +          ++   E 
Sbjct: 133 IYALAWSPSSDQVLFACQGRLIIKSFQSSIKESHWDGHNGLILAVDWNYASNLLTSGGED 192

Query: 348 SYF---------------------DPVWSPQGDLIAFTKFS------GEKFAIGVMKKD- 379
             +                        W P G+  A   F+         + +   K   
Sbjct: 193 GVYKVWDYHGRMIYQSSKIDDSITSVAWCPSGEFFAVGSFNTLWLCDKTGWVLWKEKLSA 252

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
           GS  R+          +WS  G  L 
Sbjct: 253 GSVLRI----------SWSNDGAQLA 268


>gi|294630554|ref|ZP_06709114.1| peptide hydrolase [Streptomyces sp. e14]
 gi|292833887|gb|EFF92236.1| peptide hydrolase [Streptomyces sp. e14]
          Length = 609

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 65/230 (28%), Gaps = 15/230 (6%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP----RFSP-NQQKVAY 228
           +  ++ V  +     + ++L V+  DG  +  L  ++   +        F+P        
Sbjct: 175 DGTLIAVEHTEHGDAMHSALRVLRPDGVTVAELDDTKGGTVELGLEVLGFAPVAGDTRLL 234

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +         + D           +    + A  +  +G   L+    +   +++  D
Sbjct: 235 VGHQRRGRWEPLVWDVATGEETDLALDLPGDVSA-EWYPDGSGLLVVHSFEARSELFRYD 293

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
             + A  R+         A+  PD S     S       +       S    +  D    
Sbjct: 294 PATRALTRIDTPPGTVSGATARPDGSVEYLWSSAAEPPAVR------STAGGVVLDPPG- 346

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
              P   P  D   +    G +    V K  G+   L         PTW 
Sbjct: 347 MKCPGSVPVHD--VWVDGPGGRIHALVQKPAGATGPLPTVFDIHGGPTWH 394



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 34/270 (12%), Positives = 75/270 (27%), Gaps = 39/270 (14%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +    R   +  P ++ +    +    +      +Y  D       +++ N  +    
Sbjct: 14  PDWEKRFRAPRVSLPDWAEDAPHRSLFVSNATGTYELYAWDRATGGQ-RQVTNRPNGTTD 72

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSP--------- 311
              S +G+       KD          +     R   T           +P         
Sbjct: 73  GVLSPDGEWIWWFDDKDGD--------EFGVWRRQPFTGGPDDPAVPGLAPSYPAGLALG 124

Query: 312 -DSSQIVF-ESDREGKEQLYVMQSNGSDQKRIS---QDKEASYFDPVWSPQGDLIAFTKF 366
            D    V   S  E    +++ +    ++   +        S      S  G LIA    
Sbjct: 125 RDGRTAVVGRSTDEDGTTIHLARLGAGEEPGETVEIYRHRESAGVGDLSHDGTLIAVEHT 184

Query: 367 SGEK---FAIGVMKKDGSQERLL--VEDSNL----QAPTWSP---SGRSLIFSRKKDGDT 414
                   A+ V++ DG     L   +   +    +   ++P     R L+   ++ G  
Sbjct: 185 EHGDAMHSALRVLRPDGVTVAELDDTKGGTVELGLEVLGFAPVAGDTRLLV-GHQRRGRW 243

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWVG 444
              ++ +      +  ++ P   S  +W  
Sbjct: 244 EPLVWDVATGEETDLALDLPGDVSA-EWYP 272



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 47/149 (31%), Gaps = 13/149 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMI---------LAPRFSSNG 269
           S +   +A    +  D +   L   R D      + + +             AP   +  
Sbjct: 173 SHDGTLIAVEHTEHGDAMHSALRVLRPDGVTVAELDDTKGGTVELGLEVLGFAPV--AGD 230

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
            R L+  Q+    +    D+ +     L   L  ++SA + PD S ++     E + +L+
Sbjct: 231 TRLLVGHQRRGRWEPLVWDVATGEETDLALDLPGDVSAEWYPDGSGLLVVHSFEARSELF 290

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                     RI      +       P G
Sbjct: 291 RYDPATRALTRIDT-PPGTVSGATARPDG 318


>gi|190896160|gb|ACE96593.1| U5 snRNP-specific protein-like factor [Populus tremula]
          Length = 215

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 70/227 (30%), Gaps = 23/227 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +       + +  ++ +  ++  A+ D      V   D    +  K++    S + + 
Sbjct: 4   FMVMRGHKNAVLDLHWTADGSQIISASPDK----TVRAWDVDTGKQIKKMAEHSSFVNSC 59

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S  G   ++S   D    ++  DL+     +     +   + S+S D+S  +F     
Sbjct: 60  CPSRRGPPLVVSGSDDGTSKLW--DLRQKGAIQTFPDKYQITAVSFS-DASDKIFTG--G 114

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + V      +     +  +        SP G  +  T     K  I  M+    Q 
Sbjct: 115 IYNDVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLL-TNGMDNKLCIWDMRPYAPQN 173

Query: 384 R--LLVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           R   + E             +WSP G  +       G     +Y  D
Sbjct: 174 RCVKIFEGHQHNFEKNLLKCSWSPDGSKV-----TAGSADRMVYIWD 215


>gi|169763824|ref|XP_001727812.1| protein HIR1 [Aspergillus oryzae RIB40]
 gi|121801383|sp|Q2UBU2|HIR1_ASPOR RecName: Full=Protein HIR1
 gi|83770840|dbj|BAE60973.1| unnamed protein product [Aspergillus oryzae]
          Length = 1058

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 77/242 (31%), Gaps = 50/242 (20%)

Query: 220 SPNQQKVAYATYDDEDILRVY-------LMDTRIDRAPKRI---GNFRSMILAPRFSSNG 269
           SP+  ++  A  D    +R++         D  +   PK++    N    I   RFS NG
Sbjct: 26  SPDGSRLVTAAGD--GYVRIWSTEAICNTNDPAVASKPKQLASMSNHSGTIHTVRFSPNG 83

Query: 270 KRALISVQKDEAMDIYSVDLQ------------------SNATERLTNTLFINISASYSP 311
           K    S   D+ + IY++D                         RL           +S 
Sbjct: 84  KYLA-SGADDKIVCIYTLDTNPPSHATTFGSNEAPPVENWRTVRRLIGHDNDVQDLGWSY 142

Query: 312 DSS---------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           DSS         ++V  S     E+L  +  + S  K I+ D    YF    S    +  
Sbjct: 143 DSSILVSVGLDSKVVVWSGHT-FEKLKTISIHQSHVKGITFDPANKYFATA-SDDRTVRI 200

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFSRKKDGDT 414
           F   S    +    + +       +      +P        +WSP G  +  +   +G  
Sbjct: 201 FRFTSPAPNSTAHDQMNNFVLEQTISAPFANSPLTAYFRRCSWSPDGMHIAAANAVNGPV 260

Query: 415 GS 416
            S
Sbjct: 261 SS 262



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 78/227 (34%), Gaps = 36/227 (15%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT-----------------RIDRA 249
             +    +   RFSPN + +A  +  D+ I+ +Y +DT                    R 
Sbjct: 67  MSNHSGTIHTVRFSPNGKYLA--SGADDKIVCIYTLDTNPPSHATTFGSNEAPPVENWRT 124

Query: 250 PKRIGNFRSMILAPRFSSNGKRA--------LISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +R+    + +    +S +            ++         + ++ +  +  + +T   
Sbjct: 125 VRRLIGHDNDVQDLGWSYDSSILVSVGLDSKVVVWSGHTFEKLKTISIHQSHVKGITFDP 184

Query: 302 FINISASYSPDSSQIV--FES---DREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWS 355
                A+ S D +  +  F S   +    +Q+       +     +     +YF    WS
Sbjct: 185 ANKYFATASDDRTVRIFRFTSPAPNSTAHDQMNNFVLEQTISAPFANSPLTAYFRRCSWS 244

Query: 356 PQGDLIAFTK-FSGEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSP 399
           P G  IA     +G   ++ ++ +        L+  ++ ++   +SP
Sbjct: 245 PDGMHIAAANAVNGPVSSVAIINRGSWDGDINLIGHEAPVEVCAFSP 291


>gi|85115850|ref|XP_964950.1| hypothetical protein NCU00794 [Neurospora crassa OR74A]
 gi|28926748|gb|EAA35714.1| hypothetical protein NCU00794 [Neurospora crassa OR74A]
          Length = 517

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 37/297 (12%), Positives = 81/297 (27%), Gaps = 57/297 (19%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           ++AH I         G+           S  + +G   N+  + D +    ++       
Sbjct: 137 RLAHRIP------GHGQPILAAQFSPISSGRLATGSGDNTARIWDTNTGTPKHTLKGHTG 190

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSS---- 267
            +    + P+ +++A  + D      V + D    +   +        +L   +      
Sbjct: 191 WVLGVSWRPDGEQLATCSMDG----TVRIWDPEAGKPVGQPFKGHAKWVLMTAWQPYHLW 246

Query: 268 -NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY---------SPDSSQIV 317
            +G   + S  KD    I+ V+        L+          +         S D    V
Sbjct: 247 RDGTPRIASASKDGTCRIWVVN-TGRTEHVLSGHRSSVACVRWGGTDLIYTGSHDKVVRV 305

Query: 318 F-----------ESDREGKEQL--------------YVMQSNGSDQKRISQDKEASYFDP 352
           F            S       +              +      +++ R  + KE      
Sbjct: 306 FDAVKGTLVHSLTSHAHWINHIGLSSDHALRTAYFDHTKDVPSTEEGRREKAKERFERAA 365

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWSPSGRSLI 405
                G +      + + F + +     +      RLL   + +    +SP G  + 
Sbjct: 366 KI--NGKVAERIVSASDDFTMYLWDPTNNGTKPVARLLGHQNKVNQVQFSPDGTLIA 420



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 48/138 (34%), Gaps = 7/138 (5%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +++  A+ D    + ++       +   R+   ++ +   +FS +G     SV  D ++ 
Sbjct: 373 ERIVSASDDF--TMYLWDPTNNGTKPVARLLGHQNKVNQVQFSPDGTLIA-SVGWDNSVK 429

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +++        + L   +      S+S DS  ++  S       L               
Sbjct: 430 LWNA-RDGKFLKSLRGHVAPVYQCSWSADSRLLITASK---DTTLKAWNVRTGTLAMDLP 485

Query: 344 DKEASYFDPVWSPQGDLI 361
             E   +   WSP G ++
Sbjct: 486 GHEDEVYAVDWSPDGKMV 503



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 55/138 (39%), Gaps = 10/138 (7%)

Query: 180 VSESVVSGIIKNSLCVMDR--DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           V+E +VS     ++ + D   +G             + + +FSP+   +A   +D+    
Sbjct: 371 VAERIVSASDDFTMYLWDPTNNGTKPVARLLGHQNKVNQVQFSPDGTLIASVGWDN---- 426

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER- 296
            V L + R  +  K +    + +    +S++  R LI+  KD  +  +  ++++      
Sbjct: 427 SVKLWNARDGKFLKSLRGHVAPVYQCSWSAD-SRLLITASKDTTLKAW--NVRTGTLAMD 483

Query: 297 LTNTLFINISASYSPDSS 314
           L        +  +SPD  
Sbjct: 484 LPGHEDEVYAVDWSPDGK 501



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 7/140 (5%)

Query: 268 NGKRA--LISVQKDEAMDIYS-VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           NGK A  ++S   D  M ++   +  +    RL           +SPD + I        
Sbjct: 368 NGKVAERIVSASDDFTMYLWDPTNNGTKPVARLLGHQNKVNQVQFSPDGTLIA---SVGW 424

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +  +      +  +   A  +   WS    L+  T           ++       
Sbjct: 425 DNSVKLWNARDGKFLKSLRGHVAPVYQCSWSADSRLLI-TASKDTTLKAWNVRTGTLAMD 483

Query: 385 LLVEDSNLQAPTWSPSGRSL 404
           L   +  + A  WSP G+ +
Sbjct: 484 LPGHEDEVYAVDWSPDGKMV 503



 Score = 36.5 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 52/158 (32%), Gaps = 16/158 (10%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           ++ V   S    R+       ++A +SP SS  +      G     +  +N    K   +
Sbjct: 129 VFRVQAVSRLAHRIPGHGQPILAAQFSPISSGRLATG--SGDNTARIWDTNTGTPKHTLK 186

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQ--APTWSP- 399
                     W P G+ +A     G    + +   + G       +          W P 
Sbjct: 187 GHTGWVLGVSWRPDGEQLATCSMDGT---VRIWDPEAGKPVGQPFKGHAKWVLMTAWQPY 243

Query: 400 ----SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                G   I S  KDG    +++ ++  GR E +++ 
Sbjct: 244 HLWRDGTPRIASASKDGT--CRIWVVN-TGRTEHVLSG 278


>gi|331696819|ref|YP_004333058.1| 40-residue YVTN family beta-propeller repeat-containing protein
           [Pseudonocardia dioxanivorans CB1190]
 gi|326951508|gb|AEA25205.1| 40-residue YVTN family beta-propeller repeat protein
           [Pseudonocardia dioxanivorans CB1190]
          Length = 872

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 79/224 (35%), Gaps = 20/224 (8%)

Query: 218 RFSPNQQKV-AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
            F+P+ +K+      D   I  V ++DT  +     I    +       + +G +  +  
Sbjct: 632 AFAPDGKKIYVSVWDDARTIADVAVLDTTTNSIVADI-KVNTRPFLAAVTPDGSKLWV-- 688

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFESDREGKEQLYVMQS 333
              ++  I  ++      E+    L +  +  +   S D ++  + ++ E      V   
Sbjct: 689 PNHDSGSISIINTSDYKVEK---DLAVAANPHWIEFSTDGTK-AYTANHESN---VVSVL 741

Query: 334 NGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSN 391
           + + +  I+    + S      +P   L+A   +      + ++  D +     +    N
Sbjct: 742 DVASESVITTIAVDKSPHSLAVNPDRPLVANVNYDSNT--VTMIDTDTNAVTARIPVGKN 799

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
            Q  TWSP GR   +      +T S + S D N    TL     
Sbjct: 800 PQEITWSPDGRF-CYVANVTDNTVSVI-SADSNTVTATLPVGNG 841


>gi|323455163|gb|EGB11032.1| hypothetical protein AURANDRAFT_36560 [Aureococcus anophagefferens]
          Length = 510

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/278 (13%), Positives = 82/278 (29%), Gaps = 29/278 (10%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
              +           +++   +        ++      DG          +     P FS
Sbjct: 34  AAMEVPMSSSPAELEKLVHALKKAEGQDGPSTPYAFYADGQTA-VAGTLGEYAEQTPGFS 92

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
              +     TY+   + RV     R+ R  + +      +L   F+ +GK          
Sbjct: 93  --GETALAVTYEPLSVFRV----RRVSRCAETLPGHSDAVLHVGFAPDGKSLA---SGGG 143

Query: 281 AMDIYSVDLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              +   D  S    R T     +     +++PD+S++    DR G  ++ V        
Sbjct: 144 DATVRLWDALSKTP-RATCGGHRHHVLCLAWAPDASKVA-SGDRSG--EVRVWDPKTGAS 199

Query: 339 KRISQDKEASYFDPVWSP---------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
            +  +          WSP         +   +  +        I   +       L    
Sbjct: 200 LKTLKKHSKWITALAWSPAHLPQPASAEACEVLASTSKDASVKIWNTRTGSMIASLTGHT 259

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
            +++A  W+  G   ++S  +  D   K++    +G+ 
Sbjct: 260 DSVEALAWAGDGA--LYSASR--DRTVKVWRCREDGKW 293



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 10/122 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +       Q +   +F+P+ +K A A++D +    V L   R              + A
Sbjct: 392 PKARLTGHQQPVNAIQFAPDARKFASASFDKK----VKLWHGRTGAFLATFTGHVGAVYA 447

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-D 321
             FS +  R L+S  KD  + +++V   +           ++    ++P+ +     S D
Sbjct: 448 LAFSPD-SRLLVSASKDSTLKVWNVADDATLPGHYDEVFAVD----WAPNGASAASGSKD 502

Query: 322 RE 323
           R 
Sbjct: 503 RT 504


>gi|225436851|ref|XP_002271734.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 486

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 60/179 (33%), Gaps = 21/179 (11%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISA 307
           P  +    S     +FS++G    ++  +   + IY+VD      + +   +  +     
Sbjct: 116 PWLVDQMTSRAYVSQFSADG-SLFVAGFQGSHIRIYNVDRGWKVQKNILAKSLRWTVTDT 174

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-------------W 354
           S SPD   +V+ S       + +  +       I++  +   F                +
Sbjct: 175 SLSPDQRHLVYASMSPIVHIVNIGSAATESLANITEIHDGLDFSAADDEGYSFGIFSVKF 234

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           S  G  +           I V   + ++   R+L   S++    ++     LI+S   D
Sbjct: 235 STDGRELVAGSSDDS---IYVYDLEANKLSLRILAHTSDVNTVCFADESGHLIYSGSDD 290


>gi|242221060|ref|XP_002476286.1| predicted protein [Postia placenta Mad-698-R]
 gi|220724469|gb|EED78509.1| predicted protein [Postia placenta Mad-698-R]
          Length = 404

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 8/139 (5%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           SV SG   +++ +                  +     SP+   +A           + L 
Sbjct: 168 SVASGYEDSTIILWYPATGGCITELKGHTDTICALALSPDSSLLASCF----RNRLIILW 223

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TL 301
           +         +      I    FS +GK+   S   D  + I+  D++S   + L     
Sbjct: 224 NVAASEKTVALNGHDGFIETLAFSRDGKKLA-SGSVDCTVRIW--DVESGQQQSLCKVHN 280

Query: 302 FINISASYSPDSSQIVFES 320
            + +  ++SPD +Q+   S
Sbjct: 281 ALVMVVTFSPDGTQLASGS 299



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 48/144 (33%), Gaps = 10/144 (6%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +S+NG    ++   +++  I            L        + + SPDSS +       
Sbjct: 161 SYSANG--LSVASGYEDSTIILWYPATGGCITELKGHTDTICALALSPDSSLLASC---F 215

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + +     S++       +       +S  G  +A          + +   +  Q+
Sbjct: 216 RNRLIILWNVAASEKTVALNGHDGFIETLAFSRDGKKLASGSVDCT---VRIWDVESGQQ 272

Query: 384 RLL--VEDSNLQAPTWSPSGRSLI 405
           + L  V ++ +   T+SP G  L 
Sbjct: 273 QSLCKVHNALVMVVTFSPDGTQLA 296



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 45/145 (31%), Gaps = 9/145 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S N   VA    D      + L           +      I A   S +    L S  
Sbjct: 161 SYSANGLSVASGYEDS----TIILWYPATGGCITELKGHTDTICALALSPD-SSLLASCF 215

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           ++  + +++V           +  FI   A +S D  ++   S       + +       
Sbjct: 216 RNRLIILWNVAASEKTVALNGHDGFIETLA-FSRDGKKLASGSV---DCTVRIWDVESGQ 271

Query: 338 QKRISQDKEASYFDPVWSPQGDLIA 362
           Q+ + +   A      +SP G  +A
Sbjct: 272 QQSLCKVHNALVMVVTFSPDGTQLA 296


>gi|325927062|ref|ZP_08188332.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           perforans 91-118]
 gi|325542561|gb|EGD14033.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           perforans 91-118]
          Length = 770

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/256 (13%), Positives = 70/256 (27%), Gaps = 70/256 (27%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR-----------------------IGN 255
           +SP+ Q +A           VY +++      +                        +  
Sbjct: 219 WSPDSQHLAAYRVKAPPPRMVYYIESAPTDQVQPKLHQQVYPKPGDALPVMQPVLFDLAT 278

Query: 256 FRSMILAPRFSSNGKRALISVQ-----KDEAMDIYSVDLQSNATERLTNTLFI------- 303
             +  +A     N      ++      KD     +  + + +   R+             
Sbjct: 279 HAAHPVAMTLLPN----AFTLSEMVWWKDSRGFTFEYNARGHQLYRVIEVDARTAAARTL 334

Query: 304 --NISASYS--------------------PDSSQIVFESDREGKEQLYVMQ-SNGSDQKR 340
               S ++                      D +QIV+ S+R+G E LY+    NG   ++
Sbjct: 335 IEETSPTFIEYSELSGEHENGGKHARQDLDDGAQIVWASERDGWEHLYLYDGHNGEVIRQ 394

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           +++                 + FT                 +  DG     L   +    
Sbjct: 395 VTRGDWVVRKLDRIDQAAGQVYFTASGMQPGEDPYYRHAYRIGLDGRGLTALTPLAADHE 454

Query: 395 PTWSPSGRSL--IFSR 408
             +SP G  L  ++SR
Sbjct: 455 VRYSPDGTWLLDLYSR 470



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/129 (13%), Positives = 48/129 (37%), Gaps = 12/129 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA-SYSPDSSQIVFESD--RE 323
           +G + + + ++D    +Y  D  +     ++T   ++          + Q+ F +   + 
Sbjct: 365 DGAQIVWASERDGWEHLYLYDGHNGEVIRQVTRGDWVVRKLDRIDQAAGQVYFTASGMQP 424

Query: 324 GKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMK 377
           G++      Y +  +G     ++    A+  +  +SP G  +   +++            
Sbjct: 425 GEDPYYRHAYRIGLDGRGLTALTPL--AADHEVRYSPDGTWLLDLYSRVDLGPVLELRRS 482

Query: 378 KDGSQERLL 386
            DGS  R +
Sbjct: 483 ADGSLARTV 491


>gi|226228205|ref|YP_002762311.1| putative S9C family peptidase [Gemmatimonas aurantiaca T-27]
 gi|226091396|dbj|BAH39841.1| putative S9C family peptidase [Gemmatimonas aurantiaca T-27]
          Length = 988

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 44/134 (32%), Gaps = 26/134 (19%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           A+ D      +YL D R      R+   + M+     S +G+  L     D     Y  D
Sbjct: 458 ASVDGIQFRDLYLTDVRTGN---RVPVKQRMVGTSSLSPDGRTVLFW--NDGNFHAY--D 510

Query: 289 LQSNATERLTNT---LFINIS-------AS-----YSPDSSQIVFESDREGKEQLYVMQS 333
           + +     LT      FI+          S     +S D  + V  SD      ++ +  
Sbjct: 511 VATKNVTNLTAGAPTSFIDTEDDHNVDRPSTDFIDWSRDG-RFVLISD---NYDVWRVGL 566

Query: 334 NGSDQKRISQDKEA 347
            G     ++ +  A
Sbjct: 567 GGKSWANLTGNGRA 580



 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 43/134 (32%), Gaps = 27/134 (20%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           LY+      ++  + Q    +      SP G  + F  ++   F              L 
Sbjct: 468 LYLTDVRTGNRVPVKQRMVGT---SSLSPDGRTVLF--WNDGNFHAY--DVATKNVTNLT 520

Query: 388 -----------EDSNLQAPT-----WSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRN 427
                      +D N+  P+     WS  GR ++ S   D    G  G    ++  NGR 
Sbjct: 521 AGAPTSFIDTEDDHNVDRPSTDFIDWSRDGRFVLISDNYDVWRVGLGGKSWANLTGNGRA 580

Query: 428 ETLINTPAYASDPQ 441
           E +       +DP 
Sbjct: 581 ERIRYNRVVRTDPT 594



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 47/269 (17%), Positives = 91/269 (33%), Gaps = 35/269 (13%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA---TYDDED 235
           +  ++ V GI    L + D    N     P + +++     SP+ + V +     +   D
Sbjct: 454 YERQASVDGIQFRDLYLTDVRTGN---RVPVKQRMVGTSSLSPDGRTVLFWNDGNFHAYD 510

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILA-PR-----FSSNGKRALISVQKDEAMDIYSVDL 289
           +    + +         I       +  P      +S +G+  LIS    +  D++ V L
Sbjct: 511 VATKNVTNLTAGAPTSFIDTEDDHNVDRPSTDFIDWSRDGRFVLIS----DNYDVWRVGL 566

Query: 290 QSNATERLT-NTLF----INISASYSP-----DSSQIVFES---DREGKEQLYVMQSNGS 336
              +   LT N        N      P     D ++ V+      R  KE +  +    +
Sbjct: 567 GGKSWANLTGNGRAERIRYNRVVRTDPTDRTIDLTKPVYIVAMQARTKKESVVRIDPAKN 626

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-AIGVMKKDGS----QERLLVEDSN 391
               ++  ++A Y  P+ +   D+   T  +  +F     +    +      RL   + N
Sbjct: 627 GVVSVTGWRDARY-APIRAKNADVWVSTIQTSTRFPDYWRVSFGANALADSVRLSDANPN 685

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           L    WS   R + +  +K       LY 
Sbjct: 686 LNGVAWSAGSRLVNYVTEKGDSLQGALYL 714


>gi|238489787|ref|XP_002376131.1| histone transcription regulator Hir1, putative [Aspergillus flavus
           NRRL3357]
 gi|220698519|gb|EED54859.1| histone transcription regulator Hir1, putative [Aspergillus flavus
           NRRL3357]
          Length = 1058

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 77/242 (31%), Gaps = 50/242 (20%)

Query: 220 SPNQQKVAYATYDDEDILRVY-------LMDTRIDRAPKRI---GNFRSMILAPRFSSNG 269
           SP+  ++  A  D    +R++         D  +   PK++    N    I   RFS NG
Sbjct: 26  SPDGSRLVTAAGD--GYVRIWSTEAICNTNDPAVASKPKQLASMSNHSGTIHTVRFSPNG 83

Query: 270 KRALISVQKDEAMDIYSVDLQ------------------SNATERLTNTLFINISASYSP 311
           K    S   D+ + IY++D                         RL           +S 
Sbjct: 84  KYLA-SGADDKIVCIYTLDTNPPSHATTFGSNEAPPVENWRTVRRLIGHDNDVQDLGWSY 142

Query: 312 DSS---------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           DSS         ++V  S     E+L  +  + S  K I+ D    YF    S    +  
Sbjct: 143 DSSILVSVGLDSKVVVWSGHT-FEKLKTISIHQSHVKGITFDPANKYFATA-SDDRTVRI 200

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFSRKKDGDT 414
           F   S    +    + +       +      +P        +WSP G  +  +   +G  
Sbjct: 201 FRFTSPAPNSTAHDQMNNFVLEQTISAPFANSPLTAYFRRCSWSPDGMHIAAANAVNGPV 260

Query: 415 GS 416
            S
Sbjct: 261 SS 262



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 78/227 (34%), Gaps = 36/227 (15%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT-----------------RIDRA 249
             +    +   RFSPN + +A  +  D+ I+ +Y +DT                    R 
Sbjct: 67  MSNHSGTIHTVRFSPNGKYLA--SGADDKIVCIYTLDTNPPSHATTFGSNEAPPVENWRT 124

Query: 250 PKRIGNFRSMILAPRFSSNGKRA--------LISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +R+    + +    +S +            ++         + ++ +  +  + +T   
Sbjct: 125 VRRLIGHDNDVQDLGWSYDSSILVSVGLDSKVVVWSGHTFEKLKTISIHQSHVKGITFDP 184

Query: 302 FINISASYSPDSSQIV--FES---DREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWS 355
                A+ S D +  +  F S   +    +Q+       +     +     +YF    WS
Sbjct: 185 ANKYFATASDDRTVRIFRFTSPAPNSTAHDQMNNFVLEQTISAPFANSPLTAYFRRCSWS 244

Query: 356 PQGDLIAFTK-FSGEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSP 399
           P G  IA     +G   ++ ++ +        L+  ++ ++   +SP
Sbjct: 245 PDGMHIAAANAVNGPVSSVAIINRGSWDGDINLIGHEAPVEVCAFSP 291


>gi|154685122|ref|YP_001420283.1| YdjN [Bacillus amyloliquefaciens FZB42]
 gi|154350973|gb|ABS73052.1| YdjN [Bacillus amyloliquefaciens FZB42]
          Length = 348

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 36/93 (38%), Gaps = 9/93 (9%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ----KDEAMDIYSVDLQSNA-TERLTN 299
                 + + N    I     S +GK  + +       ++   I  +++++      ++N
Sbjct: 214 GAGEHLQDLTNLEQFISDVAVSPDGKNLVFTSYTQKGTEQKASIRLMNVKTKKDETIISN 273

Query: 300 TLF----INISASYSPDSSQIVFESDREGKEQL 328
                  I+    +S D S I F ++ +G ++L
Sbjct: 274 GKDFAPLIDAQPQFSKDGSIIYFMAEAKGAKRL 306



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 40/110 (36%), Gaps = 14/110 (12%)

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----KFAIGVMKKDGSQERLLVE 388
           +   +  +   + E    D   SP G  + FT ++ +    K +I +M     ++  ++ 
Sbjct: 213 AGAGEHLQDLTNLEQFISDVAVSPDGKNLVFTSYTQKGTEQKASIRLMNVKTKKDETIIS 272

Query: 389 DSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +    AP       +S  G  + F  +  G    K    D  GRN  +  
Sbjct: 273 NGKDFAPLIDAQPQFSKDGSIIYFMAEAKGAKRLK----DETGRNAKVRT 318



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 41/106 (38%), Gaps = 10/106 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDTRIDRAPKRIGNF 256
           G +++ LT   +Q + +   SP+ + + + +Y  +       + LM+ +  +    I N 
Sbjct: 216 GEHLQDLTN-LEQFISDVAVSPDGKNLVFTSYTQKGTEQKASIRLMNVKTKKDETIISNG 274

Query: 257 RS----MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           +     +   P+FS +G       +   A  +   D      +  T
Sbjct: 275 KDFAPLIDAQPQFSKDGSIIYFMAEAKGAKRL--KDETGRNAKVRT 318


>gi|28630243|gb|AAM88904.1| guanine nucleotide-binding protein [Petromyzon marinus]
          Length = 317

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/271 (14%), Positives = 91/271 (33%), Gaps = 38/271 (14%)

Query: 193 LCVMDRDGAN---IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  + RD  N    +         + +   S + Q     ++D      + L D      
Sbjct: 42  MWKLTRDETNYGIPQRSLHGHGHFVSDVVISSDGQFALSGSWDG----TLRLWDLTTGTT 97

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-- 307
            +R+      +L+  FS++ ++ + S  +D+ + ++     +    + T     +     
Sbjct: 98  TRRLVGHTKDVLSVAFSADNRQIV-SGSRDKTIKLW----NTLGVCKYTIQEDGHTEWVS 152

Query: 308 --SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
              +SP+++  +  S     + + V        K               SP G L A   
Sbjct: 153 CVRFSPNNNNPIIVSC-GWDKLVKVWNLTNCKLKTNHIGHTGYLNTVTVSPDGSLCASGG 211

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             G+     +   +  +    ++  + + A  +SP+ R  + +      TG  +   DL 
Sbjct: 212 KDGQAM---LWDLNEGKHLYTLDGGDTINALCFSPN-RYWLCAA-----TGPSIKIWDLE 262

Query: 425 GR------NETLINTPAYASDP-----QWVG 444
           G+       + +I+T + A  P      W  
Sbjct: 263 GKVIVDELRQEVISTSSKAEPPQCISLAWSA 293


>gi|50978782|ref|NP_001003094.1| pro-epidermal growth factor precursor [Canis lupus familiaris]
 gi|62901516|sp|Q9BEA0|EGF_CANFA RecName: Full=Pro-epidermal growth factor; Short=EGF; Contains:
           RecName: Full=Epidermal growth factor; Flags: Precursor
 gi|13537341|dbj|BAB40599.1| epidermal growth factor [Canis lupus familiaris]
          Length = 1216

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 85/242 (35%), Gaps = 17/242 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           S+  +D +G N   L       +    F  N++++ +   + + + RV+L  TR     +
Sbjct: 55  SIFRIDLEGTNHEQLVADAGVSVIM-DFHYNKERIYWVDPERQLLQRVFLNGTRQ----E 109

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+ N    +     +   +  + S Q++    I   D++ N +  L   L    + +  P
Sbjct: 110 RVCNIEKNVSGMAINWINEELIWSNQQEGI--ITVTDMKGNNSRVLLRALNYPANVAIDP 167

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LIAFTKFSGE 369
               I + S+      L+    NG ++K + Q  E      +         I +    G 
Sbjct: 168 IERFIFWSSEVAVAGSLHRADLNGVEEKILLQTSERITAVSLDVLDKQLFWIQY-SRDGS 226

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK-------DGDTGSKLYSID 422
              I     DG    L    +       S  G  + +S  K       +  +G  +  I+
Sbjct: 227 NSHIYSCNYDGGSVHLSKHLTQHNFFAMSLFGNQIFYSTWKKKTIWIANKHSGKDMVRIN 286

Query: 423 LN 424
           L+
Sbjct: 287 LD 288


>gi|296412031|ref|XP_002835731.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295629521|emb|CAZ79888.1| unnamed protein product [Tuber melanosporum]
          Length = 522

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 71/211 (33%), Gaps = 19/211 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRAL 273
           RFSP+ + +A  ++     L                     +   P      S +     
Sbjct: 208 RFSPDSEIIAAGSWSGSIRLLTIPNLEDKSLLRGHTERVGGITWHPQATVSLSPDSANLA 267

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            S   +  + ++S+   +     LT          + P  + +   S  +   +L+    
Sbjct: 268 -SGGGEGTVHLWSLTQDTPIAT-LTGHSARVARVEHHPSGNYLASASY-DTTWRLW--DL 322

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
               +  + +      +   +   G LIA    SG   +IG +    +   ++V D +++
Sbjct: 323 PTQKELLLQEGHSREVYTVAFQIDGALIA----SGGLDSIGRVWDLRTGRTIMVLDGHIR 378

Query: 394 APT---WSPSGRSLIFSRKKDGDTGSKLYSI 421
             T   WSP G  ++ S    GD   K++ +
Sbjct: 379 EVTGLAWSPDGYRVVSSS---GDATVKVWDV 406



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 75/237 (31%), Gaps = 57/237 (24%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
                   +RLWD+  +K+++ ++            H  S ++Y       G        
Sbjct: 309 ASASYDTTWRLWDLPTQKELLLQE-----------GH--SREVYTVAFQIDGAL------ 349

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
               + SG + +   V D        +     + +    +SP+  +V  ++ D      V
Sbjct: 350 ----IASGGLDSIGRVWDLRTGRTIMVLDGHIREVTGLAWSPDGYRVVSSSGD----ATV 401

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRF---------------------------SSNGKRA 272
            + D R+ R    IG  + ++   RF                            + G   
Sbjct: 402 KVWDVRMVRCTATIGAHKGLVSDVRFFSGKQDSSVAMDGTDEGQAAAAAAEAMRTEGTYL 461

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
             S   D  ++I+S D      + L+       S   S D   IV  S ++   +L+
Sbjct: 462 ATSGF-DGNVNIFSSD-DWALVKNLSAHSGNVTSVDISRDDRFIV-SSGQDRTVKLW 515


>gi|169602505|ref|XP_001794674.1| hypothetical protein SNOG_04254 [Phaeosphaeria nodorum SN15]
 gi|160706185|gb|EAT88014.2| hypothetical protein SNOG_04254 [Phaeosphaeria nodorum SN15]
          Length = 665

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 73/177 (41%), Gaps = 13/177 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
              VV G  K +L      G     +    ++  F   ++ +   VA A  D      + 
Sbjct: 461 RMRVVVGDFKETLITNAETGQ-PFEILHGHNEDAFACAWADDGIHVATAAQDS----SIT 515

Query: 241 LMDTRIDRAP-KRIGNFRSMILAPRFSS--NGKRALISVQKDEAMDIYSVDLQSNATERL 297
           + D R    P K I +  S+  + RFS   +G R L++ + D+   I  ++ Q+  ++++
Sbjct: 516 VWDARNWATPIKNIASQLSIPRSLRFSPVGSGPRVLVAAEADDY--INVINAQTFESKQV 573

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +        S++PD   + F ++ E K    +        +R +Q K  ++ DP W
Sbjct: 574 FDFFGPIAGISFTPDGQSL-FIANGEKKFGGIIELDRTGWAERTAQYK--NFQDPDW 627


>gi|154338545|ref|XP_001565497.1| notchless homolog [Leishmania braziliensis MHOM/BR/75/M2904]
 gi|134062546|emb|CAM42409.1| putative notchless homolog [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 522

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 51/128 (39%), Gaps = 15/128 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---P 263
                 I+F  +FSP+   +A  + D      V L +         I  FR  + A    
Sbjct: 405 MTGHQGIVFHIQFSPDGTMLASCSADK----SVKLWNAADGTF---ITTFRGHVAAVYHV 457

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDR 322
            +S +  R L+S  KD  + ++S+           +     I A+ +SPD  ++     +
Sbjct: 458 SWSLD-SRMLVSGSKDTTLKLWSI--AKRELVEDMSGHSDEIYATDWSPDGQKVA-TGSK 513

Query: 323 EGKEQLYV 330
           + + ++++
Sbjct: 514 DKRVRIWI 521



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 42/128 (32%), Gaps = 6/128 (4%)

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              R+   + ++   +FS +G     S   D+++ +++              +      S
Sbjct: 401 HVARMTGHQGIVFHIQFSPDGTMLA-SCSADKSVKLWNA-ADGTFITTFRGHVAAVYHVS 458

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +S DS  +V  S       L +      +            +   WSP G  +A T    
Sbjct: 459 WSLDSRMLVSGSK---DTTLKLWSIAKRELVEDMSGHSDEIYATDWSPDGQKVA-TGSKD 514

Query: 369 EKFAIGVM 376
           ++  I + 
Sbjct: 515 KRVRIWIH 522



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 47/143 (32%), Gaps = 16/143 (11%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  M +++         R+T    I     +SPD + +   S     + +
Sbjct: 377 GSERLVSCSDDNTMFLWNPQQSVTHVARMTGHQGIVFHIQFSPDGTMLASCS---ADKSV 433

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIG----VMKKDGSQ 382
            +  +         +   A+ +   WS    ++         + ++I     V    G  
Sbjct: 434 KLWNAADGTFITTFRGHVAAVYHVSWSLDSRMLVSGSKDTTLKLWSIAKRELVEDMSGHS 493

Query: 383 ERLLVEDSNLQAPTWSPSGRSLI 405
           + +   D       WSP G+ + 
Sbjct: 494 DEIYATD-------WSPDGQKVA 509



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 32/90 (35%), Gaps = 5/90 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +    FSP+ Q +A           + + D       + +    S +    +
Sbjct: 149 TLDGHSEAVLVVSFSPDSQVLA----TGGGDKEIRIWDMNTLTPVQELKAHTSWVQVLSW 204

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           S +G+  + S  KD  +  ++ + + +  +
Sbjct: 205 SPDGQFLV-SGSKDGILANWTHNGEYSGFK 233


>gi|114586908|ref|XP_001165149.1| PREDICTED: N-acylaminoacyl-peptide hydrolase isoform 1 [Pan
           troglodytes]
          Length = 773

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 74/222 (33%), Gaps = 31/222 (13%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKN--SLCVMDRDGANIRYLTPSRDQILFEP 217
           D+I +    ++     + +F  +   + + K+   LCV+D +  NI  L    + +    
Sbjct: 189 DEIARLKKPDQAIKGDQFVFYEDWGENMVSKSIPVLCVLDVESGNISVLEGVPENVSPGQ 248

Query: 218 R-FSPNQQKVAYATYDDEDIL----------RVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             ++P    V +  +  E                     I    + + +    + +PR S
Sbjct: 249 AFWAPGDAGVVFVGWWHEPFRLGIRFCTNRRSALYYVDLIGGKCELLSDDSLAVSSPRLS 308

Query: 267 SNGKRALI----SVQKDEA-MDIYSVDLQSNA--------TERLT-NTLFINIS----AS 308
            +  R +     S+        +   D  +            +L  N   I  S      
Sbjct: 309 PDQCRIVYLQYPSLIPHHQCSQLCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGC 368

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
           +S DS ++VF+S +  ++ L+ + +       ++       +
Sbjct: 369 WSADSQRVVFDSAQRSRQDLFAVDTQVGTVTSLTAGGSGGSW 410


>gi|72391918|ref|XP_846253.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|62176273|gb|AAX70388.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70802789|gb|AAZ12694.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 549

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 73/215 (33%), Gaps = 22/215 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             IR L     ++      SPN++ +   + ++       L +   D         R ++
Sbjct: 246 FRIRTLIGHSARVRCL-SLSPNEKALVSCSNEE---TYATLRNLMADEERGSFSGHRDVV 301

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVF 318
           +   FS +GK    +  KD+ + ++     +  T+ LT      + I   +SPDS +IV 
Sbjct: 302 MCMAFSGDGKYLA-TGSKDKTLTLW----DAAITKVLTVFKHEKVVICCCFSPDSKRIVA 356

Query: 319 -ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              DR       V       Q               +SP G  I           + V  
Sbjct: 357 GCQDR----VCRVWDVMRGAQVVTYTRHCGIIAAVCYSPDGGSICSGSSDKT---LRVWG 409

Query: 378 KDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            +    R ++      + + ++S  G  + FS  +
Sbjct: 410 AERGGTRTVLSGHVGVVLSCSYSTDGEHI-FSNDE 443


>gi|18379250|ref|NP_563703.1| transducin family protein / WD-40 repeat family protein
           [Arabidopsis thaliana]
 gi|14334756|gb|AAK59556.1| unknown protein [Arabidopsis thaliana]
 gi|22136910|gb|AAM91799.1| unknown protein [Arabidopsis thaliana]
 gi|332189540|gb|AEE27661.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 20/188 (10%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQ 315
               +A  FSS+G+             +  +D ++    + LT          + P  S+
Sbjct: 103 PRSTIAAAFSSDGRTLA---STHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSE 159

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           IV     + + +L+   +   +  R + D         +   G+L+A     G K  I  
Sbjct: 160 IVASGSLDHEVRLW--NAKTGECIR-THDFYRPIASIAFHAGGELLAVAS--GHKLHIWH 214

Query: 376 MKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             K G       +L    +L+A  + P G  L+ + +           ID +    T   
Sbjct: 215 YNKGGDDSAPAIVLKTRRSLRAVHFHPHGVPLLLTAEVT--------DIDSSDSAMTRST 266

Query: 433 TPAYASDP 440
           +P Y   P
Sbjct: 267 SPGYLRYP 274



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 66/228 (28%), Gaps = 37/228 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + + +A    D      V ++D    +  K +   R      RF       + S  
Sbjct: 110 AFSSDGRTLASTHGDH----TVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGS 165

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + ++  + ++    R T+  +    S ++      +   S    K  ++     G 
Sbjct: 166 LDHEVRLW--NAKTGECIR-THDFYRPIASIAFHAGGELLAVAS--GHKLHIWHYNKGGD 220

Query: 337 D-QKRISQDKEASYFDPVWSPQGDLI--------------AFTKFSGEKF------AIGV 375
           D    I      S     + P G  +              A T+ +   +      AI  
Sbjct: 221 DSAPAIVLKTRRSLRAVHFHPHGVPLLLTAEVTDIDSSDSAMTRSTSPGYLRYPPPAIFF 280

Query: 376 MKKDGSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSK 417
                     L  +  L         ++S     +++S    G   ++
Sbjct: 281 TNTQSGSRTSLAAELPLVPLPYLLLPSYSADDPRILYSSGTTGPRNAQ 328


>gi|324116730|gb|EGC10645.1| rhomboid family protein [Escherichia coli E1167]
          Length = 591

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T       F    S +  K          +  +      ++ D  +++   
Sbjct: 348 ATGEIIQSITTGAHPDSFI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 405

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+        +I  ++  ++  E            +  +
Sbjct: 406 TGTSGKPGAWVMALSPDERTLLVPGA--GRGNIVRINTITHQKEDFPAGDARGTISAMRF 463

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ V     S   +      + Y     SP G  +A   +  +
Sbjct: 464 RPENGEVIFA-DSQGISRISVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 520

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 521 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 569

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 570 SLDPQAIIRHPQYG 583


>gi|167814889|ref|ZP_02446569.1| hypothetical protein Bpse9_07084 [Burkholderia pseudomallei 91]
          Length = 391

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D L V +R +D    +        +   S+ 
Sbjct: 13  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGLYV-YR-FDTDSGRVSPVSSAKAENPSYL 70

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 71  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 128

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 129 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 188

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 189 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 222

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    +  +       
Sbjct: 223 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLAHVETVPMTAPGF 282

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 283 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 327


>gi|260789478|ref|XP_002589773.1| hypothetical protein BRAFLDRAFT_90446 [Branchiostoma floridae]
 gi|229274956|gb|EEN45784.1| hypothetical protein BRAFLDRAFT_90446 [Branchiostoma floridae]
          Length = 573

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 47/261 (18%), Positives = 77/261 (29%), Gaps = 46/261 (17%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  +  L   R+  +    FSP+   +   + D      + L D         I    + 
Sbjct: 86  GQRLTTLAHPRNNGMRTVSFSPDSNVLVAGSVDG----TLVLWDAYTKEMLSVIEAHDTS 141

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL------------------TNTL 301
           I A  F+ +G   L S   +  M ++  D +    + L                  T   
Sbjct: 142 ICACAFTPDGNFLL-SGSMEGNMKLW--DGRYGNNKCLYYLAEGHDLGVTCCVFSPTFGS 198

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQ----SNGSDQK-RI-SQDKEASYFDPVWS 355
               +           F     G + L  +     S G D + R+  Q   A+     +S
Sbjct: 199 ANPDNPVPETQPRMQYFMLASCGADMLVKLWDVHVSPGYDMRLRVNLQGHSATVNACAFS 258

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDT 414
           P G  +A       + AI      G +  +L           +S  G  L         T
Sbjct: 259 PDGKRLASGSVD--RAAIVWNPLTGEKLYMLTGHPRCVTTVAFSLDGMYLA--------T 308

Query: 415 GSKLYSIDLNGRNETLINTPA 435
           G     +D   R   L++ PA
Sbjct: 309 GC----MDRTVRIWRLVDGPA 325


>gi|86608670|ref|YP_477432.1| WD repeat-/protein kinase domain-containing protein [Synechococcus
           sp. JA-2-3B'a(2-13)]
 gi|86557212|gb|ABD02169.1| WD-repeat/protein kinase domain protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 759

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 47/304 (15%), Positives = 86/304 (28%), Gaps = 46/304 (15%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           G ++  G D   +  RLWD +  + +  + +     S   +A  IS D    +     D 
Sbjct: 442 GNLLAAGGDDGVI--RLWDPQAGQLL--QSWAGHEGSVEALA--ISPD-GTFLVSGGADK 494

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            +R+  ++      +    +          R        ++     SP+ + +A  + D 
Sbjct: 495 TARVWDLATLGDPALSPGDVL--------ARLQLQGHTGLINSVAISPDGRWIASGSADR 546

Query: 234 EDILRVYLMDTRIDRAPKRIGNF----------RSMILAPRFSSNGKRALISVQKDEAMD 283
                + L      +  + +             R+ I A  F     R   S Q +    
Sbjct: 547 ----TIRLWQADNGQLIRTLSPHTAAAAQDTPQRAGITAVAFGPRPTRMNTSRQSEGIPP 602

Query: 284 IYSVDLQSNATERL----------TNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQ 332
              V    + T  L          T      I     SPD   ++  S       + V  
Sbjct: 603 WILVAANGDPTVHLWDPGSGALLETLKADYPIEQVLLSPDGRYLLAGS----TGGILVWN 658

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                 +R      +       SP G L+A +        I +     S E+L       
Sbjct: 659 LGTGSLERTLPQTLSGLAALALSPDGRLLA-SGTDYRAHQIKLWDL-RSGEQLRTLGGQT 716

Query: 393 QAPT 396
              +
Sbjct: 717 WMVS 720



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 35/130 (26%), Gaps = 21/130 (16%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            + + SPD + +    D      + +         +     E S      SP G  +   
Sbjct: 434 TALAISPDGNLLAAGGD---DGVIRLWDPQAGQLLQSWAGHEGSVEALAISPDGTFLV-- 488

Query: 365 KFSGEKFAIGVMKKDG------------SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
              G      V                 ++ +L      + +   SP GR +        
Sbjct: 489 -SGGADKTARVWDLATLGDPALSPGDVLARLQLQGHTGLINSVAISPDGRWIA---SGSA 544

Query: 413 DTGSKLYSID 422
           D   +L+  D
Sbjct: 545 DRTIRLWQAD 554



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 74/248 (29%), Gaps = 45/248 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+   +A       D   + L D +  +  +        + A   S +G   + S  
Sbjct: 437 AISPDGNLLA----AGGDDGVIRLWDPQAGQLLQSWAGHEGSVEALAISPDGTFLV-SGG 491

Query: 278 KDEAMDIYSV---------DLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQ 327
            D+   ++ +              A  +L     +  S + SPD   I   S DR     
Sbjct: 492 ADKTARVWDLATLGDPALSPGDVLARLQLQGHTGLINSVAISPDGRWIASGSADRT---- 547

Query: 328 LYVMQSNGSDQKRIS----------QDKEASYFDPVWSPQGDLIAFTKFS---------- 367
           + + Q++     R              + A      + P+   +  ++ S          
Sbjct: 548 IRLWQADNGQLIRTLSPHTAAAAQDTPQRAGITAVAFGPRPTRMNTSRQSEGIPPWILVA 607

Query: 368 -GEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                 + +     G+    L  D  ++    SP GR L+         G  ++++    
Sbjct: 608 ANGDPTVHLWDPGSGALLETLKADYPIEQVLLSPDGRYLL----AGSTGGILVWNLGTGS 663

Query: 426 RNETLINT 433
              TL  T
Sbjct: 664 LERTLPQT 671


>gi|71661424|ref|XP_817733.1| activated protein kinase C receptor [Trypanosoma cruzi strain CL
           Brener]
 gi|71661426|ref|XP_817734.1| activated protein kinase C receptor [Trypanosoma cruzi strain CL
           Brener]
 gi|70882943|gb|EAN95882.1| activated protein kinase C receptor, putative [Trypanosoma cruzi]
 gi|70882944|gb|EAN95883.1| activated protein kinase C receptor, putative [Trypanosoma cruzi]
          Length = 318

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 43/251 (17%), Positives = 89/251 (35%), Gaps = 31/251 (12%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS    +SL + +      ++      + +    FSP+ +++   +   ++ LRV+ +  
Sbjct: 83  VSASWDHSLRLWNLQTGVCQHKFLGHTKDVLSVTFSPDNRQI--VSGGRDNALRVWNVKG 140

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTN---T 300
                  R G     +   RFS + +  LI        ++  V D+ S     LT+    
Sbjct: 141 ECLHTLGR-GAHTDWVSCVRFSPSLETPLIVS--GGWDNLVKVWDIASGRL--LTDLKGH 195

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                S + SPD S     SD++G  +L+ + + G     ++     +     +SP    
Sbjct: 196 TNYITSVTVSPDGSLCA-SSDKDGVARLWDL-TKGEALSEMAAGAPINQIC--FSPNRYW 251

Query: 361 IAFTKFSGEKFAIGVMKKDGSQE---------RLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           +      G    I +   +             +   +     +  WS  G +L +S   D
Sbjct: 252 MCAATEKG----IRIFDLENKDVIVELAPEAQQKSKKTPECMSIAWSADGNTL-YSGYTD 306

Query: 412 GDTGSKLYSID 422
                +++S+ 
Sbjct: 307 N--VIRVWSVS 315



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 74/222 (33%), Gaps = 16/222 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G   R L       + +   S N      A++D      + L + +      +       
Sbjct: 57  GFPERRL-EGHSAFVSDVALSNNGDFAVSASWDH----SLRLWNLQTGVCQHKFLGHTKD 111

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIV 317
           +L+  FS + ++ + S  +D A+ ++  +++      L      +  +   +SP     +
Sbjct: 112 VLSVTFSPDNRQIV-SGGRDNALRVW--NVKGECLHTLGRGAHTDWVSCVRFSPSLETPL 168

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVM 376
             S   G + L  +    S +         +Y   V  SP G L A +        +  +
Sbjct: 169 IVS--GGWDNLVKVWDIASGRLLTDLKGHTNYITSVTVSPDGSLCA-SSDKDGVARLWDL 225

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              G     +   + +    +SP+ R  + +  + G     L
Sbjct: 226 -TKGEALSEMAAGAPINQICFSPN-RYWMCAATEKGIRIFDL 265


>gi|320174706|gb|EFW49838.1| putative membrane protein [Shigella dysenteriae CDC 74-1112]
          Length = 625

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 83/254 (32%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T            S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSLI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+        +I  ++  ++  E            +  +
Sbjct: 440 AGTSGKPGAWVMALSPDERTLLVPGA--GRGNIVRINTITHQKEDFPAGDARGTISAMRF 497

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ V     S   +      + Y     SP G  +A   +  +
Sbjct: 498 RPENGEVIFA-DSQGISRISVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 554

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 555 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 603

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 604 SLDPQAIIRHPQYG 617


>gi|315634242|ref|ZP_07889529.1| CsgG family protein [Aggregatibacter segnis ATCC 33393]
 gi|315476832|gb|EFU67577.1| CsgG family protein [Aggregatibacter segnis ATCC 33393]
          Length = 223

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 21/129 (16%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPV-------SIAFTKFV------- 56
           +  K    LL   I      +      V     N            I+  KF        
Sbjct: 1   MMKKFYPVLLSASILALAGCATEGSRTVEVQKVNSYNTAYHGVKAPISVGKFDNRSSYQN 60

Query: 57  -----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVL 111
                 +D+LG +   ++   LQ+S  F+++ + +  +  T  ++  + +     GA  +
Sbjct: 61  GVFSDGVDQLGNQAKTILVSHLQQSGRFSVLDRTNMSE--TAAEAKIKGKKQTLKGANYV 118

Query: 112 VTGRVIKEG 120
           VTG V + G
Sbjct: 119 VTGDVTEFG 127


>gi|307321669|ref|ZP_07601060.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium
           meliloti AK83]
 gi|306892698|gb|EFN23493.1| adenylate/guanylate cyclase with TPR repeats [Sinorhizobium
           meliloti AK83]
          Length = 629

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 10/154 (6%)

Query: 50  IAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW 103
           +A   F       +   L   ++E +  DL R   F +I+++S +        +      
Sbjct: 219 VAVLPFDNYGRDEATGRLADGLTEDIITDLARFPEFKVIARNSTETYKGKAIDVREIG-- 276

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            +L    +V G + +E  DR+RV  +L D K  + +  +++         I   I++ I 
Sbjct: 277 KALDVGFVVEGSIAREA-DRVRVTAQLVDSKQGRHLWSQRWDRPDKEVFVIQAEIAEQIA 335

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIK-NSLCVM 196
             + G  G         +   V G +    L ++
Sbjct: 336 NRLGGGAGLVQESGRVAAHRKVPGNLNAYELYLL 369


>gi|298252288|ref|ZP_06976091.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297546880|gb|EFH80748.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 747

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 83/278 (29%), Gaps = 49/278 (17%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-- 254
           + +G N+     + D I     +SP    +       + I    +   R +  P+     
Sbjct: 393 NPNGPNLVIRDINIDTISGL-AWSPQGNFLTTMPGTSDTIYTWDIEHMRANATPQPGAKL 451

Query: 255 NFRSMILAPRFSSNGKRALI--------SVQKDEAMDIYSVDLQSNAT--ERLTNTLFIN 304
           N +       +S +G    +        S     ++D+Y+ D    A   ++        
Sbjct: 452 NLKYGSKTLAWSPDGSILALGNTNEETLSDFHTMSLDLYTRDFSGRAPGFQKPIFAKGAG 511

Query: 305 I--SASYSPDSSQIVFE----SDREGKEQLYVMQSNGSDQKRISQD------------KE 346
                +++    + +F     +D E  +  Y+   + +   + + +              
Sbjct: 512 TLNGLTWTR--QKYLFSVSYIADAEDYQHFYLWGLDCNKPGQTTMNATKIKAYIGGGISP 569

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----------- 395
           A+      SP G  IA     G    +G    +G           L  P           
Sbjct: 570 ANTLVKA-SPDGQKIAIACEGG--ILVGTASMNGGLPTWQDAPGQLPLPQDQNFQDLLTV 626

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +WSP G  +         T   ++ +   G  +T + T
Sbjct: 627 SWSPDGNKVA-GYYSSNTTALAVWDV-GKGTKQTALTT 662



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 54/182 (29%), Gaps = 11/182 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYA------TYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           Y+           + SP+ QK+A A               +        + P        
Sbjct: 562 YIGGGISPANTLVKASPDGQKIAIACEGGILVGTASMNGGLPTWQDAPGQLPLPQDQNFQ 621

Query: 259 MILAPRFSSNGKRAL-ISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQI 316
            +L   +S +G +          A+ ++ V  +      LT TL     + +Y  +    
Sbjct: 622 DLLTVSWSPDGNKVAGYYSSNTTALAVWDV-GKGTKQTALTTTLSNKITTLAYGTNGKTP 680

Query: 317 -VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIG 374
            +     +G+ QL+           +S D + +     WS     +A +         I 
Sbjct: 681 LIATGTPDGQIQLWDTNHFDQPVATLSSDVKKAVQALAWSADYKWLAASYNDDYATTHIW 740

Query: 375 VM 376
            M
Sbjct: 741 KM 742


>gi|295836690|ref|ZP_06823623.1| dipeptidyl peptidase IV [Streptomyces sp. SPB74]
 gi|295826164|gb|EFG64716.1| dipeptidyl peptidase IV [Streptomyces sp. SPB74]
          Length = 713

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 73/217 (33%), Gaps = 42/217 (19%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------- 264
             + +PR SP+  ++AY +     ++       +   AP+       +            
Sbjct: 135 GPVIDPRPSPDGSRIAYVSEGALRLVDADGSGDKALAAPEEAQVAYGLAEFVAAEEMDRT 194

Query: 265 ----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               ++ +  R L++   +  +  +           + +    +   +      Q+ +  
Sbjct: 195 RGFWWAPDSARLLVARVDESPVPRWW----------IADPAHPDREPA------QVAYP- 237

Query: 321 DREGKE----QLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGV 375
            R G      +L++    G   + +       Y   V WS  G  +   +   ++ A+ +
Sbjct: 238 -RAGTANADVRLFLYDLEGGRTEVVWDRARYPYLARVHWSAAGAPLLLVQSRDQRAALYL 296

Query: 376 -MKKDGSQERLLVEDSN-------LQAPTWSPSGRSL 404
            + ++    R++  D +         +P W+P G+ +
Sbjct: 297 GVDEESGATRMVHADEDPDWVELRAGSPAWTPDGKLV 333



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 50/167 (29%), Gaps = 36/167 (21%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQ---LYVMQS--NGSDQKRISQDKEASYFDPV- 353
           TL    S + +PD S+ VF   R G ++   L+V+    +G   +R+  D  A       
Sbjct: 19  TLGAPRSLTIAPDGSRTVFLRSRSGTDRSQMLWVLDVTEDGKTSERLLADPAALLGAGGE 78

Query: 354 ----------------------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                                 ++    L         +  +          R L     
Sbjct: 79  RLSARERARRERARESAAGIVGYASDAALTTAAYALSGR--LWTTDTRSGASRALAVPGP 136

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +  P  SP G  + +  +        L  +D +G  +  +  P  A 
Sbjct: 137 VIDPRPSPDGSRIAYVSE------GALRLVDADGSGDKALAAPEEAQ 177


>gi|253990417|ref|YP_003041773.1| 6-phosphogluconolactonase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781867|emb|CAQ85030.1| 6-phosphogluconolactonase [Photorhabdus asymbiotica]
          Length = 329

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 44/275 (16%), Positives = 89/275 (32%), Gaps = 22/275 (8%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF-SPN--QQKVAYATYDDEDILRVYLMD 243
           G+      V  + G+N   +      I   P   S +   + +   +Y   ++    + D
Sbjct: 53  GVRPQFCIVTYQIGSNGELVQQGISPIPGSPTHISTDKQGRFLFSVSYSYNNLSVNPIDD 112

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS----NATERLTN 299
             I  AP ++        +     + K+ L+   K++   I+ +  +        E +T 
Sbjct: 113 QGIVGAPVQVIEDLQAPHSANIDWDNKQLLVPCLKEDHTRIFEMVAEGFLVEKRAEEVTT 172

Query: 300 TLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS--- 355
            +       ++ P+   I   ++ +    +Y         + I    +       WS   
Sbjct: 173 AMGAGPRHMAFHPNQQVIYCINELDSTVDVYRKWEKYRIVQTIDSLPK-DLAGVRWSADI 231

Query: 356 ---PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPS--GRSLIFSRK 409
              P G  +  ++ +    +  ++  DG    L         P  ++    G+ LI S +
Sbjct: 232 HITPDGRHLYTSERTSSLISHFIISPDGFNLTLAGHYKTETQPRGFAIDHSGKYLIVSGQ 291

Query: 410 KDGDTGSKLYSID-LNGRNETLINTPAYASDPQWV 443
           K         SID   G+   L   P     P WV
Sbjct: 292 KSDHISVS--SIDKYTGKLTELTRYPVGKG-PMWV 323


>gi|195029537|ref|XP_001987629.1| GH22022 [Drosophila grimshawi]
 gi|193903629|gb|EDW02496.1| GH22022 [Drosophila grimshawi]
          Length = 358

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/210 (11%), Positives = 67/210 (31%), Gaps = 16/210 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRS 258
           G  ++Y        +   RF PN   +   + D      + +      +  + +    + 
Sbjct: 53  GYELKYKLEGHVSHVTAIRFCPNGDWLTSTSDDR----SLKMWSIETGQLFQTLDTGHKL 108

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            +    +S + K    S   D+ + ++      +    L        + S  P SS I  
Sbjct: 109 GVNDVTWSPDSKFMA-SCSDDKTIKLW-HPHNGHCFRTLVGHTDNVFACSIHPSSSLIAS 166

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S       + +         ++    +       ++  G+L     + G    + +   
Sbjct: 167 TSF---DCTVQLWDVRNGRSLKVVPAHKDPITSVDFNLNGNLFVTGSYDG---LVRIWST 220

Query: 379 DGSQERLLV---EDSNLQAPTWSPSGRSLI 405
                +  +   ++S + +  ++P+GR ++
Sbjct: 221 ISGNVQQTLIDEDNSPVGSVKFAPNGRYIL 250



 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/187 (10%), Positives = 60/187 (32%), Gaps = 9/187 (4%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +  S      +  ++  G   + L       + +  +SP+ + +A  + D      + L 
Sbjct: 80  TSTSDDRSLKMWSIE-TGQLFQTLDTGHKLGVNDVTWSPDSKFMASCSDDK----TIKLW 134

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                   + +      + A     +      S   D  + ++ V     + + +     
Sbjct: 135 HPHNGHCFRTLVGHTDNVFACSIHPSSSLIA-STSFDCTVQLWDV-RNGRSLKVVPAHKD 192

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S  ++ + +  V     +G  +++    +G+ Q+ +  +  +      ++P G  I 
Sbjct: 193 PITSVDFNLNGNLFV-TGSYDGLVRIWST-ISGNVQQTLIDEDNSPVGSVKFAPNGRYIL 250

Query: 363 FTKFSGE 369
               +  
Sbjct: 251 AAHLNSR 257


>gi|188991165|ref|YP_001903175.1| Putative peptidase [Xanthomonas campestris pv. campestris str.
           B100]
 gi|167732925|emb|CAP51121.1| Putative peptidase [Xanthomonas campestris pv. campestris]
          Length = 806

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 47/404 (11%), Positives = 104/404 (25%), Gaps = 87/404 (21%)

Query: 80  NLISQDSFKQKIT--NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRK 137
            L+   S +      +           +      V  ++     ++  + F+L D+  + 
Sbjct: 118 RLVDAASGRNTPAFDHARLAAALTQAGAHNVDAAVL-QLQDPALEQQTLRFQLADLGWQC 176

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIY-----QSITGEKGDFNSRILFVSESVVSGIIKNS 192
           ++   ++  +    R       D  +     +       D   R+            + +
Sbjct: 177 ELA--RYRCAHLPERDARPESMDMSFPLKQGERYAKHSPDGRWRVWV---------EQGN 225

Query: 193 LCVMDRDGANIRYLTPSRDQILFEP----RFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           L +    G     ++       F       +SP+ Q VA           VY +++    
Sbjct: 226 LLIAPVGGGTPTAISHDGSASDFYAIDTVVWSPDSQHVAAYRVKAPPPHIVYYIESAPAD 285

Query: 249 APK---------------------------RIGNFRSMILAP--------RFSSNGKRAL 273
             +                           R      M L P        ++  + +   
Sbjct: 286 RVQPKLHQQVYPKPGDPLPVMQPVLFDVATRTARPVDMTLLPNAFTLSELQWWKDSRGVT 345

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY---SP-----------------DS 313
                        +++ +      T       S ++   SP                 D 
Sbjct: 346 FEYNARGHQLYRVIEVDAGTAVARTVIE--ETSPTFIEYSPLSGDNEDGGKYARHDLADG 403

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--- 370
           +Q+++ S+R+G E LY+         R     E          +     +   SG +   
Sbjct: 404 AQLLWASERDGWEHLYLYDGRTGRVMRQVTRGEWVVRRLDHVDEAAGQVYFTASGMQPGE 463

Query: 371 ----FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
                    +  DG+    L   +      +SP GR  +    +
Sbjct: 464 DPYYRHAYRIGLDGTGLTALTPLAADHDVRYSPDGRWFLDLSSR 507


>gi|126657702|ref|ZP_01728856.1| hypothetical protein CY0110_25923 [Cyanothece sp. CCY0110]
 gi|126620919|gb|EAZ91634.1| hypothetical protein CY0110_25923 [Cyanothece sp. CCY0110]
          Length = 501

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 77/218 (35%), Gaps = 29/218 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----SSNGKRALIS 275
           S   +++AY         + Y +         R    +  ++ P      S +   A I 
Sbjct: 93  SWAGRRLAYTVETPVPYGQTYQVQLSDATERFRENKQQGQVMEPFVGTFQSRDRALAYIG 152

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-------QL 328
            Q +E   +   ++     + LT    + ++  + P  ++I+F +  +G         +L
Sbjct: 153 TQGEEQGRLVFYNITQQHKKILTPPDLVVMNFEFYPQGNRILFSAYEKGLGIDGLRQLEL 212

Query: 329 YVM------------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAI 373
           Y +             ++    + I  ++         S  G+ I   + + E    F +
Sbjct: 213 YSVTTGVNNGVEDTQNNSAGKVEEILDNETYQNNQFDLSADGETIVIQRVNRENPADFDL 272

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            ++K+    ERL +   + +    +P  ++L  +R + 
Sbjct: 273 WIVKQGEKPERLKITGGDFE---ITPDNQALAVARGEG 307


>gi|325925875|ref|ZP_08187244.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           perforans 91-118]
 gi|325543706|gb|EGD15120.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           perforans 91-118]
          Length = 694

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 51/140 (36%), Gaps = 10/140 (7%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKF 366
           S SPD   + + +  EG   ++V   +  DQ R I++D      +  W+ Q + + + + 
Sbjct: 60  SISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPNTLLYLRD 119

Query: 367 SGE--KFAIGVMKKDGSQERLLVEDSNLQAPTW-----SPSGRSLIFSRKKDGDTGSKLY 419
           +G    F +  +       + L       A  +      P   S++            LY
Sbjct: 120 NGGDEDFHLFSVNLADGSSKDLTPFKKTNAEVYRVSAQHP--ESIMVGMNDRDAKWHDLY 177

Query: 420 SIDLNGRNETLINTPAYASD 439
            +DL     TL+     + D
Sbjct: 178 RVDLASGKRTLVQKNTDSLD 197



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 60/171 (35%), Gaps = 13/171 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLF---INISASYSPDSSQIVFE 319
             S +GK        +  ++++   + + +    +T        N   +Y P+   +++ 
Sbjct: 60  SISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPN--TLLYL 117

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIG 374
            D  G E   L+ +       K ++  K+ +      S   P+  ++       +   + 
Sbjct: 118 RDNGGDEDFHLFSVNLADGSSKDLTPFKKTNAEVYRVSAQHPESIMVGMNDRDAKWHDLY 177

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSIDLN 424
            +     + R LV+ +      +   G   L ++ +   D G +L   D N
Sbjct: 178 RVDLASGK-RTLVQKNTDSLDAYLLDGDYQLRYATRATDDAGRELLVPDGN 227



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 8/94 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDS----NLQAPTWSP 399
                 +   SP G  +++         + V   D   Q R + +D+         T+ P
Sbjct: 52  GNPERANVSISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQP 111

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
           +  +L++ R   GD    L+S++L +G ++ L  
Sbjct: 112 N--TLLYLRDNGGDEDFHLFSVNLADGSSKDLTP 143


>gi|317035262|ref|XP_001396553.2| transcriptional repressor rco-1 [Aspergillus niger CBS 513.88]
          Length = 590

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 51/155 (32%), Gaps = 12/155 (7%)

Query: 256 FRSMILAPRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             S++   RFS +GK       +     D         LQ    ++  N      S  +S
Sbjct: 283 HDSVVCCVRFSRDGKYLATGCNRSAQIFDVTTGQNVATLQDENVDK--NGDLYIRSVCFS 340

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +   ++    +Q+ V   N    K I    E   +   ++  G  IA +    + 
Sbjct: 341 PDGKYLATGAE---DKQIRVWDINARTIKHIFTGHEQDIYSLDFAGNGRYIA-SGSGDKT 396

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +  +  DG     L  +  +     SP G  + 
Sbjct: 397 VRLWDI-LDGKLVYTLSIEDGVTTVAMSPDGHYVA 430


>gi|309791236|ref|ZP_07685768.1| Peptidoglycan-binding domain 1 protein [Oscillochloris trichoides
           DG6]
 gi|308226798|gb|EFO80494.1| Peptidoglycan-binding domain 1 protein [Oscillochloris trichoides
           DG6]
          Length = 500

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 62/189 (32%), Gaps = 23/189 (12%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL--ISVQKDEA 281
           Q+     Y   D  +  L+        + +      + APR S +G+     I+ Q    
Sbjct: 123 QRTGTLVYLVGDAQQQTLVALDGSGRRELLS---GQLQAPRISPDGQTVALRITGQPAAP 179

Query: 282 MDIYSVDLQSNATERL----TNTLFINISASYSP------DSSQIVFESDREGK--EQLY 329
             ++++ ++      +     +    +    Y+P      D+  +++  D  G       
Sbjct: 180 DGVWALPVRGGRPSLVLADGPDASSSDAEWVYTPVSYAPNDARLLLWAYDAAGPAIPGGQ 239

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAIGVMKKDGSQERLL 386
            +   G   +  +         PVWS  G  I  T        ++ +  +      E+ +
Sbjct: 240 AVVVEGGQTRLRTW---TCCEWPVWSTDGTAITVTGGGPGPDLRYGLVKIDLVSGAEQPI 296

Query: 387 VEDSNLQAP 395
           +E ++   P
Sbjct: 297 LEQTDEAVP 305



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 7/123 (5%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            EQ+  ++++ +   +IS + +      V    G L+      G+     ++  DGS  R
Sbjct: 93  NEQIVRLETDATTLTQISFESQPVRDLSVAQRTGTLVYLV---GDAQQQTLVALDGSGRR 149

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA---YASDPQ 441
            L+    LQAP  SP G+++             ++++ + G   +L+        +SD +
Sbjct: 150 ELL-SGQLQAPRISPDGQTVALRITGQPAAPDGVWALPVRGGRPSLVLADGPDASSSDAE 208

Query: 442 WVG 444
           WV 
Sbjct: 209 WVY 211


>gi|293395326|ref|ZP_06639610.1| oligogalacturonide lyase [Serratia odorifera DSM 4582]
 gi|291422010|gb|EFE95255.1| oligogalacturonide lyase [Serratia odorifera DSM 4582]
          Length = 219

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 4/91 (4%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-SPDSSQIVFESDRE 323
           F+ +G++ L + + D   + Y +D Q     +LT     N    + SPD   + +  +  
Sbjct: 43  FTQDGRQLLFAAEFDGHRNYYLLDRQQRQAVQLTEGAGDNTFGGFLSPDDRFLYYVKNE- 101

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
              +L  +  +  ++  + +  E       W
Sbjct: 102 --RELRRVTLSTQEESTVYRVPEEWVGYGTW 130



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/88 (13%), Positives = 30/88 (34%), Gaps = 5/88 (5%)

Query: 285 YSVDLQSNATERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++         RLT               ++ D  Q++F ++ +G    Y++        
Sbjct: 14  FTDPGTGARVTRLTPPEVLCHRNYFYQKCFTQDGRQLLFAAEFDGHRNYYLLDRQQRQAV 73

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++++    + F    SP    + + K  
Sbjct: 74  QLTEGAGDNTFGGFLSPDDRFLYYVKNE 101


>gi|195393724|ref|XP_002055503.1| GJ18759 [Drosophila virilis]
 gi|194150013|gb|EDW65704.1| GJ18759 [Drosophila virilis]
          Length = 356

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 70/224 (31%), Gaps = 11/224 (4%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +       +    +SP+++ +  ++ D     R+ + D         +    + I+A
Sbjct: 60  PRKVLKGHQAKVLCTDWSPDKRHIISSSQDG----RLIIWDAFTTNKEHAVTMPTTWIMA 115

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESD 321
             ++ +G         ++         +  A ++ T     +  S    P+S Q +    
Sbjct: 116 CAYAPSGNYVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTG- 174

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDG 380
             G     +         +              +P      F   S ++ A I  M+   
Sbjct: 175 -SGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGH 233

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +      S++ +  + P G ++        D+  +LY +  +
Sbjct: 234 VVQSFEGHQSDVNSVKFHPCGDAIATGSD---DSSCRLYDMRAD 274


>gi|189195286|ref|XP_001933981.1| DNA polymerase alpha accessory factor Mcl1 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187979860|gb|EDU46486.1| DNA polymerase alpha accessory factor Mcl1 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 885

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 66/181 (36%), Gaps = 30/181 (16%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             SS+GK   +     + + +  V+ +  +   L +        S+    +++   S  +
Sbjct: 103 ALSSDGKWVAV---GSDELSVNLVNTKDKSMRTLRDQPRAVKHVSFDKTDNRLA-VSCTD 158

Query: 324 GKEQLYVMQSNGSDQKRISQDKEA----------SYFDPVWSPQGDLIAFTKFSGEKFAI 373
           G   +Y +     DQ  + +  E           S    +W P G   AF   +  +  I
Sbjct: 159 GHVYMYTLD---GDQPEMDKRVEGMIKSMEADSESSSKVLWHPDGR--AFATPTAMR-QI 212

Query: 374 GVMKKDGSQERLLVEDS---NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            VM     + + + +     ++ A  WSP+G  L+ +     D    L+    + + + +
Sbjct: 213 QVMSTSDWERQRVFKTGHTADITAAAWSPNGALLVTTSS---DLSLNLW----DTKTQKI 265

Query: 431 I 431
           +
Sbjct: 266 L 266



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 42/109 (38%), Gaps = 8/109 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDR 322
           +  +G+    +        I  +       +R+  T       +A++SP+ + +V  S  
Sbjct: 196 WHPDGR--AFAT-PTAMRQIQVMSTSDWERQRVFKTGHTADITAAAWSPNGALLVTTSS- 251

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                L +  +      +  ++ +A+     W P  +++++T   GE F
Sbjct: 252 --DLSLNLWDTKTQKILKKYENVKATILAMAWHPTENILSYTNNEGELF 298


>gi|149921797|ref|ZP_01910243.1| peptidase S9B, dipeptidylpeptidase IV domain protein [Plesiocystis
           pacifica SIR-1]
 gi|149817358|gb|EDM76832.1| peptidase S9B, dipeptidylpeptidase IV domain protein [Plesiocystis
           pacifica SIR-1]
          Length = 842

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/250 (16%), Positives = 76/250 (30%), Gaps = 40/250 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--- 274
            ++P+   +A+   D+  I    ++    D              A     +  R  +   
Sbjct: 276 WWAPDGSSLAFIEVDETHIPAYRIVHQGKDAVGDAAQEDHGYPFAGT---DNARVRLGVV 332

Query: 275 ----SVQKDEAMDIYSVDLQSNAT---ER---LTNTLFIN---ISASYSPDSSQIVFESD 321
               +    +A  I  +DL        ER    T     +       Y PD        D
Sbjct: 333 PLTTTPSSAKAGSIRWLDLAGAVADWTERGGEWTTDAAQDFYIARVGYMPDGRLCAQVQD 392

Query: 322 REGKEQ--LYVMQSNGSDQKRISQDKE-----ASYFDP--------VWSPQ--GDLIAFT 364
           R   E   L    + GS    +++  E      + F P           P+  G  + + 
Sbjct: 393 RRQLELRLLCFAGAAGSPTTLLTETSEVWINLHNLFIPLDLDEATAAAHPEQVGGFL-WA 451

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS--GRSLIFSRKKDGDTGSKLYSID 422
                   + +   DG + R L    +    + S    G+++ F+  KD      LY++ 
Sbjct: 452 SEKSGFQHLYLHGADGKEIRQLT-SGDWMVESASVDEAGQTVYFTATKDDARERHLYAVG 510

Query: 423 LNGRNETLIN 432
           L+G     I 
Sbjct: 511 LDGEGLRKIT 520



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 61/200 (30%), Gaps = 61/200 (30%)

Query: 264 RFSSNGKRALISVQKDEAM--DIYSVDLQ--SNATERLTNTLFINIS-ASYSPDSS---- 314
           RFS + +        D+++  +++++DLQ    A +R+       +S    SP+      
Sbjct: 91  RFSPDDRYLAFLDSPDDSLSRELFAIDLQAEDGAPKRVVEPPGGGVSEDKLSPEEKLARE 150

Query: 315 ---QIVFESDREGKE-----------------------QLYVMQSNGSDQKRI---SQDK 345
              Q      R                           +++V      + +R+   +++ 
Sbjct: 151 RLRQRALGVTRYSWPKAPPAAPTGEAAPPVPILVPLTGEIWVQDGLDGELRRLVGKTEED 210

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVED--------------- 389
                 P  SP G+ +A+ K       + V+     S    + +                
Sbjct: 211 PRPALSPRLSPSGEHVAYVK----GGELWVVPTAPDSAPVQVTKGVEAGKLRGLAEYIAA 266

Query: 390 ---SNLQAPTWSPSGRSLIF 406
                     W+P G SL F
Sbjct: 267 EEMGRHTGFWWAPDGSSLAF 286



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 38/134 (28%), Gaps = 17/134 (12%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG---NFRS 258
             R L  +R      P  +P  +              +++ D       + +G       
Sbjct: 153 RQRALGVTRYSWPKAPPAAPTGEAAPPVPILVPLTGEIWVQDGLDGELRRLVGKTEEDPR 212

Query: 259 MILAPRFSSNGKRALIS---------VQKDEAMDIYSVDLQSNATERLTNTLFIN----- 304
             L+PR S +G+                 D A    +  +++     L   +        
Sbjct: 213 PALSPRLSPSGEHVAYVKGGELWVVPTAPDSAPVQVTKGVEAGKLRGLAEYIAAEEMGRH 272

Query: 305 ISASYSPDSSQIVF 318
               ++PD S + F
Sbjct: 273 TGFWWAPDGSSLAF 286



 Score = 36.9 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 55/146 (37%), Gaps = 26/146 (17%)

Query: 265 FSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTL--FINISASYSP---DSSQI 316
           +  +G+     VQ    +++  +       + T  LT T   +IN+   + P   D +  
Sbjct: 380 YMPDGRLCA-QVQDRRQLELRLLCFAGAAGSPTTLLTETSEVWINLHNLFIPLDLDEATA 438

Query: 317 V----------FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAF- 363
                      + S++ G + LY+  ++G + ++++      +     S    G  + F 
Sbjct: 439 AAHPEQVGGFLWASEKSGFQHLYLHGADGKEIRQLT---SGDWMVESASVDEAGQTVYFT 495

Query: 364 -TKFSGEKFAIGVMKKDGSQERLLVE 388
            TK    +  +  +  DG   R + E
Sbjct: 496 ATKDDARERHLYAVGLDGEGLRKITE 521


>gi|169859606|ref|XP_001836441.1| ribosome biogenesis protein Sqt1 [Coprinopsis cinerea okayama7#130]
 gi|116502499|gb|EAU85394.1| ribosome biogenesis protein Sqt1 [Coprinopsis cinerea okayama7#130]
          Length = 428

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/134 (14%), Positives = 43/134 (32%), Gaps = 8/134 (5%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNATERL 297
           Y+ D        ++      + +  +SS+G   + +   D  + I+           E L
Sbjct: 100 YIWDITDGEVIVKLTGHTDSVTSTAWSSDG-ELISTGGMDGKIRIWRRVGKDNYRTWEFL 158

Query: 298 TNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           T     +  +   + P  + ++  S+      L++ Q       ++      +     +S
Sbjct: 159 TELQGPDEVMFLRWHPKGNVLLAGSN---DSTLWLWQLPKGTTMQVFSGHTGAVNCGEFS 215

Query: 356 PQGDLIAFTKFSGE 369
           P G  I      G 
Sbjct: 216 PDGKKIVSACADGT 229



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 51/141 (36%), Gaps = 14/141 (9%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S  +D+   I+ +        +LT       S ++S D  +++     +GK  + + 
Sbjct: 89  LAASGGEDDLGYIWDI-TDGEVIVKLTGHTDSVTSTAWSSDG-ELISTGGMDGK--IRIW 144

Query: 332 QSNGSDQKRISQDKEASYFDP------VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +  G D  R + +       P       W P+G+++         +   +    G+  ++
Sbjct: 145 RRVGKDNYR-TWEFLTELQGPDEVMFLRWHPKGNVLLAGSNDSTLWLWQL--PKGTTMQV 201

Query: 386 LV-EDSNLQAPTWSPSGRSLI 405
                  +    +SP G+ ++
Sbjct: 202 FSGHTGAVNCGEFSPDGKKIV 222


>gi|37520431|ref|NP_923808.1| hypothetical protein gll0862 [Gloeobacter violaceus PCC 7421]
 gi|35211425|dbj|BAC88803.1| gll0862 [Gloeobacter violaceus PCC 7421]
          Length = 489

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 75/235 (31%), Gaps = 24/235 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+  ++ + T   ED + V    T  ++    + +   M +   F  +G+ A +    
Sbjct: 132 FTPDGGEL-WVTVRGEDYVAVLDARTYREKRRIVVADGPGMAV---FRPDGRYAFVCSS- 186

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASY-----SPDSSQIVFESDREGKEQLYVMQS 333
               ++ ++D ++      T  +   +S        +PD  Q+       GK Q+   + 
Sbjct: 187 -FTPELAAIDPRTYQ----TVAIVRQLSPFCPNLAATPDGRQVWLTLKDTGKTQILSAEP 241

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             S    +      ++ + V + +G     T        +     D  +    +    L 
Sbjct: 242 PFSTLAVLDTGPITNHVNFVRNARGQFAYVTVGGENTVKVFTTD-DTPRPVATIPVGALP 300

Query: 394 APTW-SPSGRSLIFSRKKDGD-------TGSKLYSIDLNGRNETLINTPAYASDP 440
              W S  G  L    +                 +I      + ++  P  A DP
Sbjct: 301 HGLWPSADGTRLYVGLEHANAIAVVDTLANRVTATIPGGQSPQAIVYAPGAAGDP 355


>gi|115439261|ref|NP_001043910.1| Os01g0686800 [Oryza sativa Japonica Group]
 gi|1346109|sp|P49027|GBLPA_ORYSJ RecName: Full=Guanine nucleotide-binding protein subunit beta-like
           protein A; Short=GPB-LR; AltName: Full=RWD; AltName:
           Full=Receptor for activated C kinase 1A
 gi|540535|dbj|BAA07404.1| q group of receptor for activated C-kinase [Oryza sativa Japonica
           Group]
 gi|113533441|dbj|BAF05824.1| Os01g0686800 [Oryza sativa Japonica Group]
 gi|125527298|gb|EAY75412.1| hypothetical protein OsI_03315 [Oryza sativa Indica Group]
 gi|125571617|gb|EAZ13132.1| hypothetical protein OsJ_03054 [Oryza sativa Japonica Group]
 gi|215704365|dbj|BAG93799.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765745|dbj|BAG87442.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215768333|dbj|BAH00562.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 334

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/264 (12%), Positives = 81/264 (30%), Gaps = 34/264 (12%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                 E RLWD+     +  ++F         +A ++               ++R +  
Sbjct: 92  SGSWDGELRLWDLSTG--VTTRRFVGHDKDVLSVAFSV---------------DNRQIVS 134

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +    +  + N+L                 +  +   RFSPN  +    +   +  ++V+
Sbjct: 135 ASRDRTIKLWNTLGECKYTIGGDLGGGEGHNGWVSCVRFSPNTFQPTIVSGSWDRTVKVW 194

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +     R    +      + A   S +G     S  KD    ++ +  +      L + 
Sbjct: 195 NLTNCKLRC--NLEGHGGYVNAVAVSPDGSLCA-SGGKDGVTLLWDL-AEGKRLYSL-DA 249

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-------ISQDKEASYFDPV 353
             I  S  +SP+   +   +     + + +         +       +S+++        
Sbjct: 250 GSIIHSLCFSPNRYWLCAATQ----DSIKIWDLESKHIVQDLKPEIPVSKNQMLYCTSLN 305

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMK 377
           WS  G  + +  ++     I  + 
Sbjct: 306 WSADGSTL-YAGYTDGTIRIYKIS 328


>gi|46107816|ref|XP_380967.1| hypothetical protein FG00791.1 [Gibberella zeae PH-1]
          Length = 1109

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 48/304 (15%), Positives = 90/304 (29%), Gaps = 41/304 (13%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT-- 230
            +   +   + ++     N++ ++D D      L       L    F  N +        
Sbjct: 540 GSPYAVLPDDRIIFSNKDNTVHIVDPDSMECFKLAGG--PKLRYSNFEANSKSDWVVANQ 597

Query: 231 ----YDDEDILRVYL--MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD----- 279
               +D  D +R Y+  ++TR     KRI +       P FS +G +             
Sbjct: 598 EDHEHDTPDGVRNYIVAINTRTKDTVKRILDTADFYYEPSFSPDGSKLAWLEWNHPELPF 657

Query: 280 EAMDIYSV---DLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +A  +Y+    D  S +  RL             + PD S   F  +     +L+ +   
Sbjct: 658 DAARLYTATWNDHGSISDIRLIAGKDREGVAEPRWGPDGSLF-FGKEIGNYRRLFRILPG 716

Query: 335 GSDQKRISQDK---------EASYFDPVWSP-QGDLIAFTKFSGEKFAIGVMKK------ 378
             +Q  +                     ++P     I        +  + ++        
Sbjct: 717 SDEQHEVKLKGLDNAEFGGLRWFQGCHTYAPLSKRHIVAAPVILGQSRLILIDMESNSWK 776

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE-TLINTPAYA 437
           D      L E +       S     L+        TG  LY ID+ G  +   + +    
Sbjct: 777 DIGDTERLSEVNLDAVARLS-DTSVLVIGA--GDTTGKALYQIDVEGTTQIKELRSSTDD 833

Query: 438 SDPQ 441
           S P+
Sbjct: 834 SFPE 837


>gi|307183096|gb|EFN70013.1| WD repeat-containing protein 8 [Camponotus floridanus]
          Length = 169

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 10/160 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDR 322
           FS NG    I+ Q     ++   D ++  T +  + +F ++     +SP+S  I+  + +
Sbjct: 12  FSGNGAYLAIAFQ----TNLLIKDAKTLETCQ--SFVFTDVIQHMEWSPNSEYILCANIK 65

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               Q+Y +       K    +  A      WSP    I        + +I  ++     
Sbjct: 66  RAVVQVYSVHYP--QWKCKLTEGSAGLQSVAWSPDSKCIVTIADFNIQISIWNLENLTVS 123

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               ++ S      ++P G+ L     ++G    ++Y  D
Sbjct: 124 HIQNLKTSAFNKLHFNPDGKKLAVIVTEEGQDNVEIYRTD 163



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 52/117 (44%), Gaps = 6/117 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SPN + +         +++VY +     +   ++    + + +  +S + K  +     
Sbjct: 52  WSPNSEYIL-CANIKRAVVQVYSVHYPQWKC--KLTEGSAGLQSVAWSPDSKCIVTIADF 108

Query: 279 DEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +  + I+++ +L  +  + L  + F  +   ++PD  ++      EG++ + + +++
Sbjct: 109 NIQISIWNLENLTVSHIQNLKTSAFNKL--HFNPDGKKLAVIVTEEGQDNVEIYRTD 163


>gi|298252290|ref|ZP_06976093.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297546882|gb|EFH80750.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 792

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 76/239 (31%), Gaps = 51/239 (21%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----FRSMILAPRF-----SSN 268
            +S N Q++   T        VY  D   +     +       +S   AP +     S  
Sbjct: 495 SWSYNGQRLMALTQSVSTRNTVYAFDLTTNSQDPLVYQDSHIPKSDFNAPSYYEVVASPT 554

Query: 269 GKRAL---ISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIV-FESD 321
               +   +S Q  +  D+  ++         +     N S    +++PD      + S 
Sbjct: 555 SSFFVTNQLSGQTLQLWDLRDMNQPVKTLNNTSKGSDDNTSILALAWAPDGKHFAAYNS- 613

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDP------------VWSPQG-DLIAFTKFSG 368
              K+Q+++  S G+  + I     A    P             W P   +LIA +    
Sbjct: 614 ---KQQIHIFDSKGNSTQTIELADRAGQIAPNAKSILLERFALAWCPNNPNLIAVSNLD- 669

Query: 369 EKFAIGVMKKDGSQERLLVEDSNL-----------QAP-----TWSPSGRSLIFSRKKD 411
               +  ++K     RL  +D +              P     TWSP+GR +  S    
Sbjct: 670 -VIDVWDIQKKKQLHRLETDDPDAHDRKGLDPDLAWYPQVYGMTWSPNGRYIAASYSHS 727



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 81/216 (37%), Gaps = 38/216 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-----------MILAPRFSS 267
           +SP+  +VA A+ D    + ++  +T + +  K +   ++                 +S 
Sbjct: 441 WSPDGTRVATASTDHS--IMIWDTNTYLQQQHKALNIVKTPLQRWRLEDAISYYQISWSY 498

Query: 268 NGKRA-LISVQKDEAMDIYSVDLQSNATERLT-NTLFINIS----ASY-----SPDSSQI 316
           NG+R   ++        +Y+ DL +N+ + L      I  S     SY     SP SS  
Sbjct: 499 NGQRLMALTQSVSTRNTVYAFDLTTNSQDPLVYQDSHIPKSDFNAPSYYEVVASPTSSF- 557

Query: 317 VFESDREGKEQLYVMQSNGSDQKRIS-------QDKEASYFDPVWSPQGDLIAFTKFSGE 369
            F +++   + L +      +Q   +        D   S     W+P G   A       
Sbjct: 558 -FVTNQLSGQTLQLWDLRDMNQPVKTLNNTSKGSDDNTSILALAWAPDGKHFA---AYNS 613

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           K  I +    G+  + +  +   +A   +P+ +S++
Sbjct: 614 KQQIHIFDSKGNSTQTI--ELADRAGQIAPNAKSIL 647


>gi|302897473|ref|XP_003047615.1| transcription initiation factor TFIID, subunit TAF5 [Nectria
           haematococca mpVI 77-13-4]
 gi|256728546|gb|EEU41902.1| transcription initiation factor TFIID, subunit TAF5 [Nectria
           haematococca mpVI 77-13-4]
          Length = 795

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 64/182 (35%), Gaps = 4/182 (2%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           + +   F +         VSG    ++ V  +D A+ + L    D  +    + PN   V
Sbjct: 497 SHDGPAFRTLWSPQGHYFVSGGYDRAVRVWMQDHASPQRLLVGHDTSISALAWHPNGLYV 556

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
             A+ + +  +R  +         + +      I A   + NGK  L S      +  + 
Sbjct: 557 FSASDETDKSIR--MWSVVTGACVRVLTGHNDYITALECAPNGK-ILASADCAGNIFFWD 613

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +   +       +      S S+S +S+ +     ++G  +L+ ++     QK  +Q   
Sbjct: 614 IAKGTRIKRSRGHGKGGIWSLSFSVESNVLA-SGGQDGTVRLWDVELPADPQKATAQQTG 672

Query: 347 AS 348
             
Sbjct: 673 HD 674



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 61/187 (32%), Gaps = 8/187 (4%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           ++ L             +         +S  G    +S   D A+ ++  D  S   +RL
Sbjct: 480 QIRLWSLESWSCLCLYKSHDGPAFRTLWSPQGHY-FVSGGYDRAVRVWMQDHAS--PQRL 536

Query: 298 TNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                 +ISA ++ P+    VF +  E  + + +         R+             +P
Sbjct: 537 LVGHDTSISALAWHPNGLY-VFSASDETDKSIRMWSVVTGACVRVLTGHNDYITALECAP 595

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
            G ++A    +G  F   + K    +         + + ++S     L        D   
Sbjct: 596 NGKILASADCAGNIFFWDIAKGTRIKRSRGHGKGGIWSLSFSVESNVLA---SGGQDGTV 652

Query: 417 KLYSIDL 423
           +L+ ++L
Sbjct: 653 RLWDVEL 659


>gi|239947277|ref|ZP_04699030.1| x-Pro dipeptidyl-peptidase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921553|gb|EER21577.1| x-Pro dipeptidyl-peptidase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 678

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 40/112 (35%), Gaps = 4/112 (3%)

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLV 387
           +M +N    +++             +  G  I +         I +   D     E +  
Sbjct: 26  IMDNNQIIPRKVLF-GNPDKARVSLTHDGKYILYVAPKDGVLNIWLAPSDDISKAESITH 84

Query: 388 E-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           + D  ++    + + +++I+S+   GD   +LYS +L  +   L+       
Sbjct: 85  DKDRGIRGYMIAYNNKNIIYSQDHKGDENFRLYSYNLETKETKLLTPERDVR 136



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 61/160 (38%), Gaps = 10/160 (6%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISAS-YSPDSSQIVFESDREG- 324
           +GK  L    KD  ++I+       +  E +T+     I     + ++  I++  D +G 
Sbjct: 52  DGKYILYVAPKDGVLNIWLAPSDDISKAESITHDKDRGIRGYMIAYNNKNIIYSQDHKGD 111

Query: 325 -KEQLYVMQSNGSDQKRISQDKEASYFDPVW---SPQGDLIAFTKFSGEKFAIGVMKKDG 380
              +LY       + K ++ +++           S    LI   +   + F +  +  D 
Sbjct: 112 ENFRLYSYNLETKETKLLTPERDVRAGIVAISYKSSNEILIDLNERDPKYFDVYKLNLDT 171

Query: 381 SQERLLVEDSNLQAPTWSPSGR-SLIFSRKKDGDTGSKLY 419
            ++ L++++       +       + ++   D D G++ Y
Sbjct: 172 LEKELVLKNEKFTG--FIIDNNLQIRYAAAPDKDGGTEYY 209


>gi|297561607|ref|YP_003680581.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
 gi|296846055|gb|ADH68075.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Nocardiopsis dassonvillei subsp. dassonvillei DSM
           43111]
          Length = 642

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 15/85 (17%)

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGS-------------QERLLVEDS--NLQAPTWSP 399
           SP G  +A+      +  + V   D                 R +  D+  N+ A  W+ 
Sbjct: 25  SPDGTRVAYLAPWRGRLNVFVRDPDSDWTAPDQVHEADAPGVRRVTSDTRRNIDAFFWTA 84

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLN 424
            GR L+F +  DGD    L+ +D N
Sbjct: 85  DGRYLLFQQDTDGDENWHLHRVDPN 109



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 62/171 (36%), Gaps = 23/171 (13%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSN-------------ATERLTNTLFINISA-SYS 310
            S +G R          ++++  D  S+                R+T+    NI A  ++
Sbjct: 24  LSPDGTRVAYLAPWRGRLNVFVRDPDSDWTAPDQVHEADAPGVRRVTSDTRRNIDAFFWT 83

Query: 311 PDSSQIVFESDREG--KEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQGDLIAFTKF 366
            D   ++F+ D +G     L+ +  N  D+    ++  +          P     AF + 
Sbjct: 84  ADGRYLLFQQDTDGDENWHLHRVDPNRPDEPAVDLTPFEGVRLLGAQLPPDRPGTAFVQL 143

Query: 367 SGEKFAIG-VMKKDGSQERLLVEDSNLQAP-TW--SPSGRSLIFSRKKDGD 413
           +  +  +  + + D    RL     N     +W  +P  R L F+ ++ GD
Sbjct: 144 NMRRPDLADLFELDLETGRLTTAAENPGDVLSWLRTPD-RLLAFTMEEGGD 193



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 79/249 (31%), Gaps = 36/249 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRID-------------RAPKRIGNFRSMILAPRFS 266
           SP+  +VAY        L V++ D   D                +   + R  I A  ++
Sbjct: 25  SPDGTRVAYLAPWRGR-LNVFVRDPDSDWTAPDQVHEADAPGVRRVTSDTRRNIDAFFWT 83

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSSQIV 317
           ++G+  L     D   + +   +  N      +   ++++             PD     
Sbjct: 84  ADGRYLLFQQDTDGDENWHLHRVDPNRP----DEPAVDLTPFEGVRLLGAQLPPDRPGTA 139

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAI-- 373
           F      +  L  +     +  R++   E       W  +P   L+AFT   G    +  
Sbjct: 140 FVQLNMRRPDLADLFELDLETGRLTTAAENPGDVLSWLRTPD-RLLAFTMEEGGDHVLSE 198

Query: 374 GVMKKDGSQERLLVEDSNLQA-PTW-SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETL 430
                  +  R    D+     P   +P G  L     +  D  ++L  +DL  G    +
Sbjct: 199 HTEGARRAIARFPGTDALFGILPAVLTPDGNGLWIGSSRGSDR-TRLVRLDLETGEQAGV 257

Query: 431 INTPAYASD 439
            + P +  D
Sbjct: 258 DSHPVFDLD 266


>gi|182412529|ref|YP_001817595.1| peptidase S9 prolyl oligopeptidase [Opitutus terrae PB90-1]
 gi|177839743|gb|ACB73995.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Opitutus terrae PB90-1]
          Length = 656

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 51/151 (33%), Gaps = 19/151 (12%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD S++   S  +    LYV+     + K ++     S     W     LI FT     
Sbjct: 44  SPDGSKVAALSKWKEHLNLYVIDLKTKEPKMLTGLTTMSVGGVHWVGNNRLI-FTGVKDG 102

Query: 370 KF--AIGVMKKDGSQERLLVEDSNLQAPT----------WSPSGRS---LIFSRKKDGDT 414
                +  +  DG   R L E +  Q              S  G+S   ++ +  +    
Sbjct: 103 SLTGGLFAIDADGKNSRALNESAEQQGSRGSHVYRDVEIISRYGKSTDEILVASNERRLQ 162

Query: 415 GSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
               Y ++++   + L+   P      +WV 
Sbjct: 163 EPDAYRMNVHTGKKRLVAMNPGKVR--RWVA 191



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 60/137 (43%), Gaps = 15/137 (10%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            S +G +     +  E +++Y +DL++   + LT    +++   +   +++++F   ++G
Sbjct: 43  VSPDGSKVAALSKWKEHLNLYVIDLKTKEPKMLTGLTTMSVGGVHWVGNNRLIFTGVKDG 102

Query: 325 --KEQLYVMQSNGSDQKRI--SQDKEASYFDPVW-----------SPQGDLIAFTKFSGE 369
                L+ + ++G + + +  S +++ S    V+           S    L+A  +   +
Sbjct: 103 SLTGGLFAIDADGKNSRALNESAEQQGSRGSHVYRDVEIISRYGKSTDEILVASNERRLQ 162

Query: 370 KFAIGVMKKDGSQERLL 386
           +     M     ++RL+
Sbjct: 163 EPDAYRMNVHTGKKRLV 179


>gi|121698850|ref|XP_001267827.1| secreted dipeptidyl peptidase [Aspergillus clavatus NRRL 1]
 gi|306755737|sp|A1CSW4|DPP5_ASPCL RecName: Full=Probable dipeptidyl-peptidase 5; AltName:
           Full=Dipeptidyl-peptidase V; Short=DPP V; Short=DppV;
           Flags: Precursor
 gi|119395969|gb|EAW06401.1| secreted dipeptidyl peptidase [Aspergillus clavatus NRRL 1]
          Length = 724

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 55/141 (39%), Gaps = 26/141 (18%)

Query: 310 SPDSSQIVFESDREGKEQ-------LYVMQSNGSD---------QKRISQDKEASYFDPV 353
           SP+   + F+S      +       +Y++  +GS+              +  +     PV
Sbjct: 238 SPNGKWVAFKSKAPELPKANFTTAYIYLVPHDGSEKAFAINGPDSPGTPKGIKGDANSPV 297

Query: 354 WSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLI 405
           +SP  + +A+ +   E +      + V      +    V  +  ++P    W+P G++LI
Sbjct: 298 FSPNSEKLAYLQMKDETYEADRRVLYVYSIGSKKTIPSVAGNWDRSPDSIKWTPDGKTLI 357

Query: 406 FSRKKDGDTGSKLYSIDLNGR 426
              +  G   S+L++I    R
Sbjct: 358 VGSEDKGR--SRLFAIPATAR 376



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 24/126 (19%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFA-------IGVMKKDGSQERLLVED------ 389
                   D   SP G  +AF   + E          I ++  DGS++   +        
Sbjct: 226 YPPFGGASDYDLSPNGKWVAFKSKAPELPKANFTTAYIYLVPHDGSEKAFAINGPDSPGT 285

Query: 390 -----SNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYSIDLNGRNETLINTPAYASDP- 440
                 +  +P +SP+   L + + KD    +    LY   +  +         +   P 
Sbjct: 286 PKGIKGDANSPVFSPNSEKLAYLQMKDETYEADRRVLYVYSIGSKKTIPSVAGNWDRSPD 345

Query: 441 --QWVG 444
             +W  
Sbjct: 346 SIKWTP 351



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/196 (15%), Positives = 67/196 (34%), Gaps = 18/196 (9%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI---------LFEPR 218
              G + +      E   +      + ++  DG+   +     D              P 
Sbjct: 238 SPNGKWVAFKSKAPELPKANFTTAYIYLVPHDGSEKAFAINGPDSPGTPKGIKGDANSPV 297

Query: 219 FSPNQQKVAYATYDDE----DILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRAL 273
           FSPN +K+AY    DE    D   +Y+      +  P   GN+     + +++ +GK  +
Sbjct: 298 FSPNSEKLAYLQMKDETYEADRRVLYVYSIGSKKTIPSVAGNWDRSPDSIKWTPDGKTLI 357

Query: 274 ISVQKDEAMDIYSVDLQSN---ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +  +      ++++   +      +  T+   ++    + PD S +V  +       +Y 
Sbjct: 358 VGSEDKGRSRLFAIPATARDDFKPKNFTDGGAVSAY-YFLPDRSLLVTGTAIWTNWNVYT 416

Query: 331 MQSNGSDQKRISQDKE 346
                   K ++   E
Sbjct: 417 ASPAKGVIKTLASANE 432


>gi|327286428|ref|XP_003227932.1| PREDICTED: WD repeat and SOCS box-containing protein 1-like [Anolis
           carolinensis]
          Length = 426

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/277 (12%), Positives = 82/277 (29%), Gaps = 44/277 (15%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
           G   L+          R+++    WD    K  +   +               D +    
Sbjct: 137 GQDQLLLA--TGLSNGRIKI----WDAYTGKGYLNISYL--------------DPVCLCY 176

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
             +   F    L   ++       NSL ++ R   N+  +       +F   FSP+   +
Sbjct: 177 KTKSFQFLQEGLHCPKTDYGENNNNSLLLVVR--GNMMKVLRGHPNWVFSCAFSPDSSML 234

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY- 285
                       V L D       +++    + ++A  FS +G     +   D  + I+ 
Sbjct: 235 CSV----GANKTVLLWDMDKYSLIRKLEGHHNDVVACEFSPDGALLA-TASYDTRVYIWD 289

Query: 286 ----SVDLQSN----ATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSN 334
                +  +          +      +    S S+S D   +   +D +   + + +  +
Sbjct: 290 PYVGVILKEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVATLAD-DKMVRFWRIDED 348

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                +++           +S  G ++A     G  +
Sbjct: 349 Y--PAQVAPLSNG--LCCAFSTDGSVLAAGTQDGSVY 381


>gi|322499548|emb|CBZ34622.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 522

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 15/128 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---P 263
                 ++F  +FSP+   +A  + D      V L +    R    I  FR  + A    
Sbjct: 405 MTGHQGVVFHIQFSPDGTMLASCSADK----SVKLWNAEDGRF---ITTFRGHVAAVYHV 457

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDR 322
            +S +  R L+S  KD  + ++SV           +     I A+ +SPD  ++     +
Sbjct: 458 SWSLD-SRMLVSGSKDTTVKLWSV--AKRELVEDMSGHSDEIYATDWSPDGQKVA-TGSK 513

Query: 323 EGKEQLYV 330
           + + +++V
Sbjct: 514 DKRVRIWV 521



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 6/125 (4%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+   + ++   +FS +G     S   D+++ +++ +            +      S+S 
Sbjct: 404 RMTGHQGVVFHIQFSPDGTMLA-SCSADKSVKLWNAE-DGRFITTFRGHVAAVYHVSWSL 461

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           DS  +V  S       + +      +            +   WSP G  +A T    ++ 
Sbjct: 462 DSRMLVSGSK---DTTVKLWSVAKRELVEDMSGHSDEIYATDWSPDGQKVA-TGSKDKRV 517

Query: 372 AIGVM 376
            I V 
Sbjct: 518 RIWVH 522



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 14/142 (9%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  M +++         R+T    +     +SPD + +   S     + +
Sbjct: 377 GSERLVSCSDDNTMFLWNPQQSVTPVARMTGHQGVVFHIQFSPDGTMLASCS---ADKSV 433

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +  +         +   A+ +   WS    ++              +K     +R LVE
Sbjct: 434 KLWNAEDGRFITTFRGHVAAVYHVSWSLDSRMLVSGSKDT------TVKLWSVAKRELVE 487

Query: 389 DSNLQAP-----TWSPSGRSLI 405
           D +  +       WSP G+ + 
Sbjct: 488 DMSGHSDEIYATDWSPDGQKVA 509



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 5/90 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +    FSP+ Q +A           + + D       + +    S +    +
Sbjct: 149 TLDGHSEAVLVVSFSPDSQVLA----TGGGDKEIRIWDMNTLTPVEELKAHTSWVQVLSW 204

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           S +G+  + S  KD  +  ++ +       
Sbjct: 205 SPDGRYLV-SGSKDGILANWTHNGGYGDFR 233



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP   ++A T    ++  I  M      E L    S +Q  +WSP GR L+ S  KDG
Sbjct: 161 SFSPDSQVLA-TGGGDKEIRIWDMNTLTPVEELKAHTSWVQVLSWSPDGRYLV-SGSKDG 218



 Score = 37.3 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 30/88 (34%), Gaps = 6/88 (6%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG             ++   +S + + +   + D      V L         + +     
Sbjct: 440 DG-RFITTFRGHVAAVYHVSWSLDSRMLVSGSKDT----TVKLWSVAKRELVEDMSGHSD 494

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYS 286
            I A  +S +G++   +  KD+ + I+ 
Sbjct: 495 EIYATDWSPDGQKVA-TGSKDKRVRIWV 521


>gi|322492284|emb|CBZ27559.1| putative notchless homolog [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 522

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 15/128 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---P 263
                 ++F  +FSP+   +A  + D      V L +    +    I  FR  + A    
Sbjct: 405 MTGHQGVVFHIQFSPDGTMLASCSADK----SVKLWNAEDGKF---ITTFRGHVAAVYHV 457

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDR 322
            +S +  R L+S  KD  + ++SV           +     I A+ +SPD  ++     +
Sbjct: 458 SWSLD-SRMLVSGSKDTTVKLWSV--AKRELVEDMSGHSDEIYATDWSPDGQKVA-TGSK 513

Query: 323 EGKEQLYV 330
           + + +++V
Sbjct: 514 DKRVRIWV 521



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 43/125 (34%), Gaps = 6/125 (4%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+   + ++   +FS +G     S   D+++ +++ +            +      S+S 
Sbjct: 404 RMTGHQGVVFHIQFSPDGTMLA-SCSADKSVKLWNAE-DGKFITTFRGHVAAVYHVSWSL 461

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           DS  +V  S       + +      +            +   WSP G  +A T    ++ 
Sbjct: 462 DSRMLVSGSK---DTTVKLWSVAKRELVEDMSGHSDEIYATDWSPDGQKVA-TGSKDKRV 517

Query: 372 AIGVM 376
            I V 
Sbjct: 518 RIWVH 522



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 14/142 (9%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  M +++         R+T    +     +SPD + +   S     + +
Sbjct: 377 GSERLVSCSDDNTMFLWNPQQSVTPVARMTGHQGVVFHIQFSPDGTMLASCS---ADKSV 433

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +  +         +   A+ +   WS    ++              +K     +R LVE
Sbjct: 434 KLWNAEDGKFITTFRGHVAAVYHVSWSLDSRMLVSGSKDT------TVKLWSVAKRELVE 487

Query: 389 DSNLQAP-----TWSPSGRSLI 405
           D +  +       WSP G+ + 
Sbjct: 488 DMSGHSDEIYATDWSPDGQKVA 509



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/90 (12%), Positives = 30/90 (33%), Gaps = 5/90 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +    FSP+ Q +A           + + D       + +    + +    +
Sbjct: 149 TLDGHSEAVLVVSFSPDSQVLA----TGGGDKEIRIWDMNTLTPVEELKAHTNWVQVLSW 204

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           S +G+  + S  KD  +  ++ +      +
Sbjct: 205 SPDGRYLV-SGSKDGILANWTHNGDYGGFK 233



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/290 (11%), Positives = 84/290 (28%), Gaps = 61/290 (21%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + + D +         +    +    +SP+ + +   + D       +  D  
Sbjct: 171 TGGGDKEIRIWDMNTLTPVEELKAHTNWVQVLSWSPDGRYLVSGSKDGILANWTHNGDYG 230

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGK----RALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             +  K   + +  +    +    +       +S  KD ++ ++S+   +     L+   
Sbjct: 231 GFKCKKHKAHTQ-YVSHVSWEPLHRNPQCNRFVSASKDASLKMWSM--ATGLERSLSGHQ 287

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ------------------KRISQ 343
                  +       ++ S ++    + V  +                         +++
Sbjct: 288 SCVTCVKWG--GEDRIYSSSQD--RTVIVWDAGTGSPWCVLRGHAHWVNFLALSTDLVTR 343

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV---------------- 387
                + D  +S + D+ A  +   +     V+ + G  ERL+                 
Sbjct: 344 TGVFDHEDRKFSAREDMCAHARKRYD----AVVSRFGGSERLVSCSDDNTMFLWNPQQSV 399

Query: 388 --------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                       +    +SP G  L        D   KL++ + +G+  T
Sbjct: 400 TPVARMTGHQGVVFHIQFSPDGTMLA---SCSADKSVKLWNAE-DGKFIT 445



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP   ++A T    ++  I  M      E L    + +Q  +WSP GR L+ S  KDG
Sbjct: 161 SFSPDSQVLA-TGGGDKEIRIWDMNTLTPVEELKAHTNWVQVLSWSPDGRYLV-SGSKDG 218

Query: 413 DTGSKLYSIDLNG 425
              +  ++ D  G
Sbjct: 219 ILANWTHNGDYGG 231



 Score = 36.9 bits (84), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 30/88 (34%), Gaps = 6/88 (6%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG             ++   +S + + +   + D      V L         + +     
Sbjct: 440 DGK-FITTFRGHVAAVYHVSWSLDSRMLVSGSKDT----TVKLWSVAKRELVEDMSGHSD 494

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYS 286
            I A  +S +G++   +  KD+ + I+ 
Sbjct: 495 EIYATDWSPDGQKVA-TGSKDKRVRIWV 521


>gi|297537376|ref|YP_003673145.1| 40-residue YVTN family beta-propeller repeat-containing protein
           [Methylotenera sp. 301]
 gi|297256723|gb|ADI28568.1| 40-residue YVTN family beta-propeller repeat protein [Methylotenera
           sp. 301]
          Length = 356

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 69/180 (38%), Gaps = 13/180 (7%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           DD++  R+ ++D ++ +  + I           FS +GK+ +I+ + D  + ++S+  +S
Sbjct: 141 DDKEPARIGIIDLKLGKKIREITGGPE-TEGVEFSKDGKQLVITNEADNTVTVHSM--KS 197

Query: 292 NATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
               +   T            SPD     +    E   +  VM  N    +  + D  A+
Sbjct: 198 GKLLKTIKTHEYGDRPRGVKVSPDGKT--YLVTLEYGNKFMVMDKNFKVLR--TVDTGAT 253

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFS 407
            +   +  +G+ I       +   +        ++ + +   +     T++P  + ++ +
Sbjct: 254 PYGISYDRKGERIFVAANKAKTLEVY--DAKTYAKIKDIPTGNRCWHFTFTPDDKEVLLA 311


>gi|253690639|ref|YP_003019829.1| Curli production assembly/transport component CsgG [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251757217|gb|ACT15293.1| Curli production assembly/transport component CsgG [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 223

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 21/129 (16%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPV-----SIAFTKFV------- 56
           +N K+ LC + +        +  +   V         +P       I+  KF        
Sbjct: 1   MNKKVVLCSVFMSAALLSGCATESSRTVEAQKVTSYSTPYQGVRSPISVGKFENRSNYMN 60

Query: 57  -----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVL 111
                 +D LG +   ++   LQ+S  FN++ + + ++         + Q     GA  +
Sbjct: 61  GIFSDGVDRLGNQSKTILVSHLQQSGRFNVLDRTNMEELKAEAGIKGQTQ--TLKGATYV 118

Query: 112 VTGRVIKEG 120
           VTG V + G
Sbjct: 119 VTGDVTEFG 127


>gi|226309322|ref|YP_002769282.1| WD-40 repeat protein [Rhodococcus erythropolis PR4]
 gi|226188439|dbj|BAH36543.1| putative WD-40 repeat protein [Rhodococcus erythropolis PR4]
          Length = 1280

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 58/206 (28%), Gaps = 20/206 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS----MILA 262
            P     +    FSP+ + +       +  LRV+ +    + +        +      L 
Sbjct: 763 LPHPADGIVTATFSPDGRFL--VAGGRQSTLRVWDVAKWGEESAPIFATEPNGTTVHYLG 820

Query: 263 PRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
             FS +G+     +  ++      S   +      LT         +Y  D +++   S 
Sbjct: 821 VAFSPDGRELAAGTTGREVVRWDMSDPARPTPLPALTGFSSYVNELNYGKDGTRLAAGSS 880

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK--D 379
                 + V           +     +     +S  G  +     +G      +      
Sbjct: 881 ---DNSVRVWDPRTGALIE-TLPDSGAVTTVDYSDDGRNLVTGGLNGVTRVWALPGPVWA 936

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
           G+++ +           ++  G  L+
Sbjct: 937 GARDTIFTSP-------FAADGSRLV 955



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 57/199 (28%), Gaps = 49/199 (24%)

Query: 261 LAPRFSSNGK---------RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            A  +S +G+          AL  V   E     ++ +      +            +SP
Sbjct: 682 FAVAYSPDGRLLATGGAGGAALWDVSDPENPVRGTLPVDGERVVQ---------DMEFSP 732

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV---WSPQGDLIA------ 362
           D +++V  +       +     + S                V   +SP G  +       
Sbjct: 733 DGTKLVAGTS---TPDVLRWNIDVSANAVALPALPHPADGIVTATFSPDGRFLVAGGRQS 789

Query: 363 ------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
                   K+  E   I   + +G+    L          +SP GR L       G TG 
Sbjct: 790 TLRVWDVAKWGEESAPIFATEPNGTTVHYL-------GVAFSPDGRELA-----AGTTGR 837

Query: 417 KLYSIDLNGRNETLINTPA 435
           ++   D++         PA
Sbjct: 838 EVVRWDMS-DPARPTPLPA 855


>gi|242824119|ref|XP_002488194.1| transcriptional repressor TupA/RocA, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218713115|gb|EED12540.1| transcriptional repressor TupA/RocA, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 582

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 62/197 (31%), Gaps = 19/197 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALIS 275
            ++P+    A    +  D   V+  + +     + + +    S++   RFS +GK     
Sbjct: 237 NWNPD-DLPATQKREGPDWYAVFNPEVQRVLDVELVHHLVHDSVVCCVRFSRDGKYVA-- 293

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFIN-------ISASYSPDSSQIVFESDREGKEQL 328
                       D+ +           ++        S  +SPD   +   ++    +Q+
Sbjct: 294 --TGCNRSAQIFDVATGQNVATLQDESVDKDGDLYIRSVCFSPDGKYLATGAE---DKQI 348

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V        K +    E   +   ++  G  IA +    +   +  +  +G     L  
Sbjct: 349 RVWDIATRSIKHVFTGHEQDIYSLDFAGNGRYIA-SGSGDKTVRLWDV-LEGKLVYTLSI 406

Query: 389 DSNLQAPTWSPSGRSLI 405
           +  +     SP G  + 
Sbjct: 407 EDGVTTVAMSPDGHYVA 423


>gi|171695104|ref|XP_001912476.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947794|emb|CAP59957.1| unnamed protein product [Podospora anserina S mat+]
          Length = 588

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 66/234 (28%), Gaps = 40/234 (17%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                      + + + R SP+   +A A+ D      V + D         I    + I
Sbjct: 196 YQPHLCLKGHMKAISQVRISPDGCWIASASADA----TVKIWDAATGECLDTIVGHMAGI 251

Query: 261 LAPRFSSNGKRALISVQKDEAMDIY------------SVDLQSNATER------------ 296
               ++ +      +   D+A+ ++            S    +    R            
Sbjct: 252 SCLAWAPDSNTIA-TGSDDKAIRLWDRLTGNPAHAAHSTPDATGKEYRGSSTIRGGRTGN 310

Query: 297 --LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             L          ++SP  + +   S     E +++         R             +
Sbjct: 311 GPLLGHHNYVYCLAFSPKGNILASGSY---DEAVFLWDVRAGRLMRSLPAHSDPVSGIGF 367

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
              G L+      G    I V      Q  R LV + N  +    +SP+GR ++
Sbjct: 368 CNDGTLVVSCSTDG---LIRVWDTSTGQCLRTLVHEDNPAVTNVCFSPNGRFVL 418


>gi|168700621|ref|ZP_02732898.1| probable serine/threonine protein kinase [Gemmata obscuriglobus UQM
           2246]
          Length = 736

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 52/177 (29%), Gaps = 27/177 (15%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           YL    D  L    ++P+   VA       D   V + D R              +    
Sbjct: 574 YLDHRPDDPLRAVAYAPDGALVA----TAGDAGSVRVWDPRHGHTWVTFSGHEGAVHGLA 629

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS-PDSSQIVFESDRE 323
           FS +G     S   D  + ++ + L   A    T      +  ++  P +++ V      
Sbjct: 630 FSPDGTTLA-SAGADGTVRLWLLPLDVIA----TAKRVAGVFPNWVPPLANRFV------ 678

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           G  +L            + Q          ++P G  +      G+  ++      G
Sbjct: 679 GVPEL--------QAAMVLQAGPKGVNCVAFAPDGRTLV---SGGDDGSLRWWDLSG 724


>gi|170591626|ref|XP_001900571.1| HIRA protein. [Brugia malayi]
 gi|158592183|gb|EDP30785.1| HIRA protein., putative [Brugia malayi]
          Length = 801

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/266 (13%), Positives = 79/266 (29%), Gaps = 48/266 (18%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI----------LRVYLMDTRIDRAP 250
            N  ++  S   I       P+  K+A      E              +    ++     
Sbjct: 4   TNPVWIHHSGGAIYSV-DIHPDGTKIATCGQGGEGGSGLVIIWNVKPVINEKASQEASCS 62

Query: 251 KRIGN--FRSMILAPRFSSNGKRA-----------------LISVQKDEAMDIYSVDLQS 291
           + +     ++ +   R+S +G                    + S     + D  +V+ + 
Sbjct: 63  RLLSRILHQNCVNCVRWSPDGTYLGCAGDQQSLTLWEFGGRVFSAGTIGSKDSVNVE-KY 121

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF- 350
               RL       +   +S D   +      +    ++   +  +    ++ ++      
Sbjct: 122 REKYRLYGHSLDVLHLEWSKDGRYLASC-GMDHSVIIWDAHNLPNKVVSLTVERGGHQGI 180

Query: 351 --DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--------WSPS 400
                W P G  +A T+ + +   I  +  D  Q   +V D  +++          WSP 
Sbjct: 181 VKGVSWDPIGKFLA-TQSADKSVRIWTI--DNWQCIKVVMDPFIESSQSTMFCRLDWSPD 237

Query: 401 GRSLI--FSRKKDGDTGSKLYSIDLN 424
           G  LI   +    G T   +   D +
Sbjct: 238 GTYLIAPCASNNSGPTAHLIRRKDWD 263


>gi|146422979|ref|XP_001487423.1| hypothetical protein PGUG_00800 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 912

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 75/224 (33%), Gaps = 21/224 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N+          +     + + + +A+ +     +L VY   +      K+ G+F S  
Sbjct: 291 FNLIQKLSMGQNAVNTVNINKSGEWLAFGSSTLGQLL-VYEWQSE-SYILKQQGHFDSTN 348

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S +G R ++S   D  + ++ V +       L          S++    Q++F S
Sbjct: 349 -CVCYSPDGSR-VVSASDDGKIKVWDV-VSGFCLVTLQEHTAAVTGLSFAKKG-QVLFSS 404

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G  + + +     + +  +  +   +      P G+++         F I V     
Sbjct: 405 SLDGTVRAWDL-IRFRNFRTFTATERVQFNCLAVDPSGEVVVAGSQD--TFEIFVWSVQT 461

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +LL   S  + P        L F     G   S L S   +
Sbjct: 462 --AQLLDSLSGHEGPV-----SCLAF-----GSENSVLASASWD 493


>gi|260177229|gb|ACX33950.1| putative WD-40 repeat protein [uncultured prokaryote EC6]
          Length = 808

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/299 (12%), Positives = 87/299 (29%), Gaps = 21/299 (7%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
            WR      +D +       +   ++R      SVV+      +    +  +        
Sbjct: 237 DWR------ADKVLADWAHPRSVVHARFSPDGGSVVTAADDGRIRFWRQGESQPYRTAEG 290

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +     SP+ + +A + + +     +     ++         F    +A RFS   
Sbjct: 291 IRSQIRSMMLSPDGRWLA-SVHANGRAGLIESASGKLSFTNSNPTRF----VALRFSPQS 345

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESDREGKE 326
              ++       +   S    + ++    + +  +     A +SPD   +          
Sbjct: 346 DSLVLFGTAGAEIWHLSSSTNAGSSVLAVSRIAPDSQVLQAGFSPDGRWVC---TALANN 402

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            + V  +    +  + +       D  +SP G  +      G    +  ++    +    
Sbjct: 403 SVRVWSAEDGVEAALFRGHRRQVNDAAFSPDGRFVVSASHDGTV-RLWDVEASLGKLTRA 461

Query: 387 VEDSNLQAPTWSPSG-RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            E  +    T +  G R+LI     +     ++++ D       L   PA      +  
Sbjct: 462 PESGDRLE-TAAIDGHRALIRGTNAEAAASWQIWT-DSARSRIALPGLPADLPGAAFSP 518



 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 76/213 (35%), Gaps = 15/213 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           L     + + +  FSP+ + V  A++D    +R++ ++  + +  +   +   +  A   
Sbjct: 417 LFRGHRRQVNDAAFSPDGRFVVSASHD--GTVRLWDVEASLGKLTRAPESGDRLETA--- 471

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFE----- 319
           + +G RALI     EA   + +   S  +   L         A++SPD + +        
Sbjct: 472 AIDGHRALIRGTNAEAAASWQIWTDSARSRIALPGLPADLPGAAFSPDGALLATIEGAEV 531

Query: 320 --SDREGKEQLYVM--QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              D    + +  M     G + + +++  E       +S  G  +      GE     +
Sbjct: 532 RLRDAAAGQIVGRMPWNIAGGNPEMLARPGELKPLVIEFSGDGKWLMGAGDLGELVRWRM 591

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             +     R     ++      S  G  L+ +R
Sbjct: 592 SDRTEVGPRRRGSQADPAHLALSQDGELLVTAR 624



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 48/318 (15%), Positives = 84/318 (26%), Gaps = 45/318 (14%)

Query: 119 EGKDRLRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
               R  V        RLWDV+     +GK   +  +  R                E   
Sbjct: 431 SPDGRFVVSASHDGTVRLWDVEAS---LGKLTRAPESGDRL---------------ETAA 472

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            +     +  +         +     D A  R   P     L    FSP+   +A     
Sbjct: 473 IDGHRALIRGTNAEAAASWQIWT---DSARSRIALPGLPADLPGAAFSPDGALLATIEGA 529

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--------FSSNGKRALISVQKDEAMDI 284
           +  +                 G    M+  P         FS +GK   +       +  
Sbjct: 530 EVRLRDAAAGQIVGRMPWNIAGGNPEMLARPGELKPLVIEFSGDGKWL-MGAGDLGELVR 588

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + +  ++    R   +       + S D   +V  +  +   +++     GS    +   
Sbjct: 589 WRMSDRTEVGPRRRGSQADPAHLALSQDGELLV-TARLDSTLEVWR----GSSNAPVVLT 643

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                      P G+LIA          +    +      L      +    WS  GR L
Sbjct: 644 NRTRTGSIAIDPSGELIA-AGLGDGSIRLWWSDRRLPPTELRGHTLQVNCLGWSRDGRLL 702

Query: 405 IFSRKKDGDTGSKLYSID 422
                   D   +L+S+D
Sbjct: 703 A---SGSADGTVQLWSVD 717



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 44/248 (17%), Positives = 78/248 (31%), Gaps = 32/248 (12%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
              +  G N   L    +       FS + + +      D   L  + M  R +  P+R 
Sbjct: 545 MPWNIAGGNPEMLARPGELKPLVIEFSGDGKWL--MGAGDLGELVRWRMSDRTEVGPRR- 601

Query: 254 GNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
              R     P     S +G   L++ + D  ++++     SNA   LTN      S +  
Sbjct: 602 ---RGSQADPAHLALSQDG-ELLVTARLDSTLEVWR--GSSNAPVVLTN-RTRTGSIAID 654

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P    I       G   + +  S+        +          WS  G L+A     G  
Sbjct: 655 PSGELIAAG---LGDGSIRLWWSDRRLPPTELRGHTLQVNCLGWSRDGRLLASGSADGTV 711

Query: 371 FAIGVMKKDGSQERLLVE---------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               V +  GS   +  E           + +   W+ +  ++ F     G+ G+ L + 
Sbjct: 712 QLWSVDRSAGSGGLVSAERLGALRGFTGRHDEGSDWTIN--TVAF-----GNDGASLVAT 764

Query: 422 DLNGRNET 429
             +G    
Sbjct: 765 SNDGEVRR 772



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 43/150 (28%), Gaps = 7/150 (4%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDL--QSNATERLTNTLFINISASYSPDSSQIVFESD 321
            FS +G        K  + +   + L   +     +        S  ++PDS+ ++    
Sbjct: 128 AFSPDGSVVAAHEVKIGSTNPARLWLWRPAAGHTNVPCGYGELKSLMFTPDSTHLL---T 184

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G     V            + +  +      S  G L+      G    +   + D  
Sbjct: 185 AGGDGIARVWDVARGTVAATLRSQPDAMNGADLSSDGRLVVTAGRDGHAL-LWDWRAD-K 242

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                    ++    +SP G S++ +    
Sbjct: 243 VLADWAHPRSVVHARFSPDGGSVVTAADDG 272


>gi|302383577|ref|YP_003819400.1| oligopeptidase B [Brevundimonas subvibrioides ATCC 15264]
 gi|302194205|gb|ADL01777.1| Oligopeptidase B [Brevundimonas subvibrioides ATCC 15264]
          Length = 694

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 11/144 (7%)

Query: 304 NISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWS------- 355
           + S+  SPD     +     G +  L+  +  G   + I  D  A      +S       
Sbjct: 85  DDSSVPSPDGPWEYYSRFETGMQHPLFCRRPRGGGAETILLDANALAEGKAYSEVASVEH 144

Query: 356 -PQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            P   L A+ +     E   I     +  +       S+    T+SP    + ++ + D 
Sbjct: 145 SPDHTLFAYAEDAQGSEVHQIYTRDLNTGELLPDPIQSSNGNFTFSPCSCYIFWTNRDDN 204

Query: 413 DTGSKLYSIDLNGRNETLINTPAY 436
               K+Y     G    L+   A 
Sbjct: 205 GRPDKIYRRPARGGETVLVYDEAD 228



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 16/140 (11%)

Query: 266 SSNGKRALISVQKDEAMD--IYSVDLQSNATERLTNTLFINISASYS--------PDSSQ 315
           S +G     S  +                A   L +   +    +YS        PD + 
Sbjct: 91  SPDGPWEYYSRFETGMQHPLFCRRPRGGGAETILLDANALAEGKAYSEVASVEHSPDHTL 150

Query: 316 IVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF--SGEKF 371
             +  D +G E  Q+Y    N  +   +    ++S  +  +SP    I +T    +G   
Sbjct: 151 FAYAEDAQGSEVHQIYTRDLNTGEL--LPDPIQSSNGNFTFSPCSCYIFWTNRDDNGRPD 208

Query: 372 AIGVMKKDGSQERLLVEDSN 391
            I      G +  L+ ++++
Sbjct: 209 KIYRRPARGGETVLVYDEAD 228


>gi|192359579|ref|YP_001981511.1| prolyl oligopeptidase family [Cellvibrio japonicus Ueda107]
 gi|190685744|gb|ACE83422.1| prolyl oligopeptidase family [Cellvibrio japonicus Ueda107]
          Length = 656

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 44/298 (14%), Positives = 86/298 (28%), Gaps = 64/298 (21%)

Query: 112 VTGRVIKEGKDRLRVE----FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
           V  R  + G           F + DV  R         S      +  +  +D  Y   T
Sbjct: 102 VRTRAQEYGGGSYLATRTGIFCVLDVNQRIYFYSFAKGSLTPVSPEGPYRYADFCYD--T 159

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKV 226
             +     ++L V E   +        ++  D G    ++          PR SP+  K+
Sbjct: 160 KRR-----QLLVVREDYTADEQHPHSAIVALDLGTGQIHVRAEGADFYSNPRLSPDGSKL 214

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           +Y  ++   +                               +G     +        I  
Sbjct: 215 SYLRWNHPQMPW-----------------------------DGSECFCASLNAAGDIIGE 245

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--D 344
           V +    +E +           +SP   ++   SDR     LY        ++R+     
Sbjct: 246 VRVAGGNSESI-------FQPQWSPAG-ELYLVSDRSNWWNLYRWH-----EQRLEPLCA 292

Query: 345 KEASYFDPVW----SPQG---DLIAFTKFS-GEKFAIGVMKKDGSQERLLVEDSNLQA 394
           + A +  P W    S  G   + I F  +S G ++ +G++     +   +       +
Sbjct: 293 QPAEFATPQWVFGMSSYGFLSERIIFCTYSQGGQWHLGLVDSQSGELTRIQSPFRDIS 350



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 25/142 (17%)

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           + +D +      V    G+ Q  +  +    Y +P  SP G  +++ +++  +     M 
Sbjct: 171 YTADEQHPHSAIVALDLGTGQIHVRAEGADFYSNPRLSPDGSKLSYLRWNHPQ-----MP 225

Query: 378 KDGSQ-------------ERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            DGS+               + V   N ++   P WSP+G  L     +        +  
Sbjct: 226 WDGSECFCASLNAAGDIIGEVRVAGGNSESIFQPQWSPAGE-LYLVSDRSNWWNLYRWH- 283

Query: 422 DLNGRNETLINTPAYASDPQWV 443
               R E L   PA  + PQWV
Sbjct: 284 --EQRLEPLCAQPAEFATPQWV 303


>gi|123468912|ref|XP_001317671.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121900411|gb|EAY05448.1| conserved hypothetical protein [Trichomonas vaginalis G3]
          Length = 425

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 86/219 (39%), Gaps = 22/219 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +AY  YD+  I  V   D   +         + MI    +S + K  ++ + 
Sbjct: 15  AFSPDSKHIAYLNYDN-HIEIVSTDDYSQENTIICPNTIQKMI----WSPDSKYLMVLMA 69

Query: 278 KDEAMDIYSVDLQSNATERLT------NTLFINISAS-YSPDSSQI-VFESDREGKEQLY 329
               + I+S+  +    ++++      +  +I      +SP  + + +F  +     QL 
Sbjct: 70  SLNEISIFSISSKYR-PKQVSPPSYSISGGYIETERVLWSPTGNNVLLFGINSS---QLL 125

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVE 388
           +     +  KR+    ++S+   V+S  G+ +A       +  + ++  D   ++ + + 
Sbjct: 126 LWNIARNTFKRL-PTPKSSFKSAVFSNDGNYLAILTRGKAQDVLVILGNDFTPKKSISLS 184

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +  +  WS     +      D  +   L  ID+N  N
Sbjct: 185 TIDATSLYWSKDNSFIAI---PDCKSHYLLQVIDINTEN 220


>gi|85373272|ref|YP_457334.1| hypothetical protein ELI_02225 [Erythrobacter litoralis HTCC2594]
 gi|84786355|gb|ABC62537.1| hypothetical protein ELI_02225 [Erythrobacter litoralis HTCC2594]
          Length = 292

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 54/198 (27%), Gaps = 44/198 (22%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              + +         P F+      L +       DI+  D+ S    ++T T     S 
Sbjct: 41  SNGRNVTQRPGYDNQPYFTPGSATFLYARDDGTQTDIWEYDIASGTHRQITRTPESEFSP 100

Query: 308 SYSPDSS--QIVFESDRE-------------------GKEQ-------------LYVMQS 333
           + SPD     +VFE +                     G  +             +     
Sbjct: 101 TPSPDDKTISMVFERNNSIWQIERSAPDAPTWALEAAGVPEPVGYFARNYASGDILYWSR 160

Query: 334 NGSDQKRISQDKEASYF--------DPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQER 384
            G +    S +K A +F         P   P    I+F      E+  I     +    R
Sbjct: 161 YGFNVALTSAEKPAYHFISGHAVPATPHVIPGSAEISFVHRQTNEQVWIKAFDPETRAIR 220

Query: 385 LLVED-SNLQAPTWSPSG 401
            L          TW+P G
Sbjct: 221 PLTPLVGTNANYTWTPDG 238



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 4/98 (4%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            +  Q +E + I + D ++ A   LT  +  N + +++PD          +GK   +   
Sbjct: 198 FVHRQTNEQVWIKAFDPETRAIRPLTPLVGTNANYTWTPDG---AILQIEDGKVHRWRED 254

Query: 333 SNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             G ++   +S+    S      SP G  IA     G+
Sbjct: 255 GAGWAEVGDLSEPGITSANRIAVSPDGKRIAVVGLPGK 292



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 38/284 (13%), Positives = 81/284 (28%), Gaps = 73/284 (25%)

Query: 182 ESVVSGIIKNSLCVMDRDGA-------NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           E+      +  + + D D +       N R +T  R     +P F+P      YA  DD 
Sbjct: 15  ETPPPAFPETEIFLFDYDASAEGDALSNGRNVTQ-RPGYDNQPYFTPGSATFLYAR-DDG 72

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI---------- 284
               ++  D       ++I        +P  S + K   +  +++ ++            
Sbjct: 73  TQTDIWEYDIASGTH-RQITRTPESEFSPTPSPDDKTISMVFERNNSIWQIERSAPDAPT 131

Query: 285 YSVDLQS---------------------------------NATERLTNTLFINISASYSP 311
           ++++                                           +   +  +    P
Sbjct: 132 WALEAAGVPEPVGYFARNYASGDILYWSRYGFNVALTSAEKPAYHFISGHAVPATPHVIP 191

Query: 312 DSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            S++I F   R+  EQ+++          + ++     +  +  W+P G   A  +    
Sbjct: 192 GSAEISFV-HRQTNEQVWIKAFDPETRAIRPLTPLVGTNA-NYTWTPDG---AILQIEDG 246

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLI 405
           K         G       E  +L  P          SP G+ + 
Sbjct: 247 KVHRWREDGAG-----WAEVGDLSEPGITSANRIAVSPDGKRIA 285


>gi|328781435|ref|XP_003249978.1| PREDICTED: WD repeat-containing protein 82-like [Apis mellifera]
          Length = 315

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 17/158 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           + ++ +SG +  SL + D    N   +      +   P  + + + + +A   + + L++
Sbjct: 118 IEDTFLSGSLDKSLRLWDLRSPNCHGVMN----VSGRPVAAYDPEGLIFAAGVNSEFLKL 173

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           Y +   D       K            +FS +GK  LIS        I  +D       +
Sbjct: 174 YDLRSFDKGPFVTFKLSQEKECDWTGLKFSRDGKTILISTN---GSTIRLIDAFHGTPLQ 230

Query: 297 LT-----NTLFINISASYSPDSSQIVFESDREGKEQLY 329
            T     N   I I AS+SPD SQ VF    +G+  ++
Sbjct: 231 -TFAGYLNNKGIAIEASFSPD-SQFVFSGSTDGRVHVW 266


>gi|297474943|ref|XP_002687675.1| PREDICTED: apoptotic peptidase activating factor 1 isoform 4 [Bos
           taurus]
 gi|296487593|gb|DAA29706.1| apoptotic peptidase activating factor 1 isoform 4 [Bos taurus]
          Length = 1206

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 78/234 (33%), Gaps = 29/234 (12%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       ++   FS + Q++A    D      + +           I      +L  
Sbjct: 608 RLVVRPHTDAVYHACFSEDGQRIASCGADK----TLQVFKAETGEKLLEIKAHEDEVLCC 663

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS++ K    +   D+ + I+  +  +    R+ +     ++  +  ++S  +  +   
Sbjct: 664 AFSADDKFIA-TCSVDKKVKIW--NSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGS 720

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L +   N  + +        S     +SP   ++A     G    + +     + E
Sbjct: 721 NDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGT---LKLWDVKSANE 777

Query: 384 R--LLVEDS--NLQAP-----------TWSPSGRSLIFSRKKDGDTGSKLYSID 422
           R  + V+    N + P           +WS  G  ++ + K        L+S+D
Sbjct: 778 RKSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKNK----VFLWSMD 827



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 91/279 (32%), Gaps = 54/279 (19%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     L + D +    R         +   RFSP+ Q +A  + D    L+++ + + 
Sbjct: 718 TGSNDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSAD--GTLKLWDVKSA 775

Query: 246 IDRAPKRIGNFRSMILAP-----------RFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            +R    +  F      P            +S++G + +++ +    + ++S+D      
Sbjct: 776 NERKSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKN--KVFLWSMD-SGLKV 832

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDRE------------------------------- 323
                 L       +SPD S  +  SD +                               
Sbjct: 833 ADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSATVLKQEIDVVFQENEV 892

Query: 324 ---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                + +  +Q    +  +I    EA       SP    +AF    G    + ++    
Sbjct: 893 TVLAVDNIRRLQLINGNTGQIDYLTEAQVSCCCLSPHLQYLAFGGEDGAIQILELLNNRI 952

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            Q R     + ++   ++  G++LI S     D+  +++
Sbjct: 953 FQSRN-GHKTTVRHIQFTADGKTLISSSD---DSAVQIW 987


>gi|297474941|ref|XP_002687674.1| PREDICTED: apoptotic peptidase activating factor 1 isoform 3 [Bos
           taurus]
 gi|296487592|gb|DAA29705.1| apoptotic peptidase activating factor 1 isoform 3 [Bos taurus]
          Length = 1195

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/234 (14%), Positives = 78/234 (33%), Gaps = 29/234 (12%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       ++   FS + Q++A    D      + +           I      +L  
Sbjct: 597 RLVVRPHTDAVYHACFSEDGQRIASCGADK----TLQVFKAETGEKLLEIKAHEDEVLCC 652

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS++ K    +   D+ + I+  +  +    R+ +     ++  +  ++S  +  +   
Sbjct: 653 AFSADDKFIA-TCSVDKKVKIW--NSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGS 709

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L +   N  + +        S     +SP   ++A     G    + +     + E
Sbjct: 710 NDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGT---LKLWDVKSANE 766

Query: 384 R--LLVEDS--NLQAP-----------TWSPSGRSLIFSRKKDGDTGSKLYSID 422
           R  + V+    N + P           +WS  G  ++ + K        L+S+D
Sbjct: 767 RKSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKNK----VFLWSMD 816



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 42/279 (15%), Positives = 91/279 (32%), Gaps = 54/279 (19%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     L + D +    R         +   RFSP+ Q +A  + D    L+++ + + 
Sbjct: 707 TGSNDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSAD--GTLKLWDVKSA 764

Query: 246 IDRAPKRIGNFRSMILAP-----------RFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            +R    +  F      P            +S++G + +++ +    + ++S+D      
Sbjct: 765 NERKSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKN--KVFLWSMD-SGLKV 821

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDRE------------------------------- 323
                 L       +SPD S  +  SD +                               
Sbjct: 822 ADCRGHLSWVHCVMFSPDGSSFLTSSDDQTIRLWETKKVCKNSATVLKQEIDVVFQENEV 881

Query: 324 ---GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                + +  +Q    +  +I    EA       SP    +AF    G    + ++    
Sbjct: 882 TVLAVDNIRRLQLINGNTGQIDYLTEAQVSCCCLSPHLQYLAFGGEDGAIQILELLNNRI 941

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            Q R     + ++   ++  G++LI S     D+  +++
Sbjct: 942 FQSRN-GHKTTVRHIQFTADGKTLISSSD---DSAVQIW 976


>gi|212546189|ref|XP_002153248.1| transcriptional repressor TupA/RocA, putative [Penicillium
           marneffei ATCC 18224]
 gi|210064768|gb|EEA18863.1| transcriptional repressor TupA/RocA, putative [Penicillium
           marneffei ATCC 18224]
          Length = 584

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 62/197 (31%), Gaps = 19/197 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALIS 275
            ++P+    A    +  D   V+  + +     + + +    S++   RFS +GK     
Sbjct: 238 NWNPD-DLPASQKREGPDWYAVFNPEVQRVLDVELVHHLVHDSVVCCVRFSRDGKYVA-- 294

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFIN-------ISASYSPDSSQIVFESDREGKEQL 328
                       D+ +           ++        S  +SPD   +   ++    +Q+
Sbjct: 295 --TGCNRSAQIFDVATGQNVATLQDESVDKDGDLYIRSVCFSPDGKYLATGAE---DKQI 349

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V        K +    E   +   ++  G  IA +    +   +  +  +G     L  
Sbjct: 350 RVWDIATRSIKHVFTGHEQDIYSLDFAGNGRYIA-SGSGDKTVRLWDV-LEGKLVYTLSI 407

Query: 389 DSNLQAPTWSPSGRSLI 405
           +  +     SP G  + 
Sbjct: 408 EDGVTTVAMSPDGHYVA 424


>gi|150010284|ref|YP_001305027.1| dipeptidyl peptidase IV [Parabacteroides distasonis ATCC 8503]
 gi|149938708|gb|ABR45405.1| dipeptidyl peptidase IV [Parabacteroides distasonis ATCC 8503]
          Length = 804

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 83/271 (30%), Gaps = 26/271 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   K+    M R   N   L   + + +    +SP+ +  A    D   +  ++++++ 
Sbjct: 204 TDGEKDFGFGMPRTFLNTDTLCDHKRKYVMG-NWSPDGRYFAATLSDQRAVQDLWVINSI 262

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--------LQSNATERL 297
               P  +  ++  +     S      L  ++         VD        L S   +  
Sbjct: 263 AKPRPT-LETYKYQMPGEAGSPIVHLYLFDLENTGKRKEIRVDCFKDQTINLASKPDKER 321

Query: 298 TNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP--- 352
           T    +  ++ +  D+        S    +  +          K I +++  +  +    
Sbjct: 322 T---GLTRNSIWLGDNQTFYLTRVSRDMKRVDICSYTIGEDSVKAIIEERLNTSMETRPL 378

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG--RSLIFSRK- 409
             +  G  +           + +    G+ +  + +               R + F    
Sbjct: 379 AMTDNGKELIHWSERDGWAHLYLYDAQGNLKNRITKGPWHVDAIVDVDSKNRVVYFKANA 438

Query: 410 -KDGDTGS---KLYSIDLNGRNETLINTPAY 436
            + GDT      LY ++L+G    LI TP  
Sbjct: 439 REKGDTTPYYEHLYRVNLDGSGLKLI-TPGD 468



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 61/180 (33%), Gaps = 22/180 (12%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESDREGK 325
           + +    S++       +S D  S+   R+T          A+ SPD  ++VF  D    
Sbjct: 119 DDRTFTFSIKGTNGNYFFSYDYPSSRLTRITKDEIPAKIRWANISPDKKRVVFAKD---- 174

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             LYVM     + K +   ++ +  +   +  G+           F  G+ +   + + L
Sbjct: 175 LNLYVMSYEDYE-KAVKDPEDKTISEIALTTDGEK---------DFGFGMPRTFLNTDTL 224

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-----PAYASDP 440
                      WSP GR    +   D      L+ I+   +    + T     P  A  P
Sbjct: 225 CDHKRKYVMGNWSPDGRYFA-ATLSDQRAVQDLWVINSIAKPRPTLETYKYQMPGEAGSP 283



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 71/233 (30%), Gaps = 38/233 (16%)

Query: 150 SWRKIAHTISD-------DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
             R  A T+SD        +  SI   +    +    +     S I+   L  ++  G  
Sbjct: 239 DGRYFAATLSDQRAVQDLWVINSIAKPRPTLETYKYQMPGEAGSPIVHLYLFDLENTGKR 298

Query: 203 IRYLTP---------------SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                                 R  +     +  + Q   Y T    D+ RV +    I 
Sbjct: 299 KEIRVDCFKDQTINLASKPDKERTGLTRNSIWLGDNQT-FYLTRVSRDMKRVDICSYTIG 357

Query: 248 RAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
               +      +  +          NGK  +   ++D    +Y  D Q N   R+T    
Sbjct: 358 EDSVKAIIEERLNTSMETRPLAMTDNGKELIHWSERDGWAHLYLYDAQGNLKNRITKGP- 416

Query: 303 INISASYSPDSSQIV--FESDREGK-------EQLYVMQSNGSDQKRISQDKE 346
            ++ A    DS   V  F+++   K       E LY +  +GS  K I+    
Sbjct: 417 WHVDAIVDVDSKNRVVYFKANAREKGDTTPYYEHLYRVNLDGSGLKLITPGDY 469


>gi|30678798|ref|NP_849587.1| transducin family protein / WD-40 repeat family protein
           [Arabidopsis thaliana]
 gi|332189541|gb|AEE27662.1| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
          Length = 793

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 20/188 (10%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQ 315
               +A  FSS+G+             +  +D ++    + LT          + P  S+
Sbjct: 103 PRSTIAAAFSSDGRTLA---STHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSE 159

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           IV     + + +L+   +   +  R + D         +   G+L+A     G K  I  
Sbjct: 160 IVASGSLDHEVRLW--NAKTGECIR-THDFYRPIASIAFHAGGELLAVAS--GHKLHIWH 214

Query: 376 MKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             K G       +L    +L+A  + P G  L+ + +           ID +    T   
Sbjct: 215 YNKGGDDSAPAIVLKTRRSLRAVHFHPHGVPLLLTAEVT--------DIDSSDSAMTRST 266

Query: 433 TPAYASDP 440
           +P Y   P
Sbjct: 267 SPGYLRYP 274



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 66/228 (28%), Gaps = 37/228 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + + +A    D      V ++D    +  K +   R      RF       + S  
Sbjct: 110 AFSSDGRTLASTHGDH----TVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGS 165

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + ++  + ++    R T+  +    S ++      +   S    K  ++     G 
Sbjct: 166 LDHEVRLW--NAKTGECIR-THDFYRPIASIAFHAGGELLAVAS--GHKLHIWHYNKGGD 220

Query: 337 D-QKRISQDKEASYFDPVWSPQGDLI--------------AFTKFSGEKF------AIGV 375
           D    I      S     + P G  +              A T+ +   +      AI  
Sbjct: 221 DSAPAIVLKTRRSLRAVHFHPHGVPLLLTAEVTDIDSSDSAMTRSTSPGYLRYPPPAIFF 280

Query: 376 MKKDGSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSK 417
                     L  +  L         ++S     +++S    G   ++
Sbjct: 281 TNTQSGSRTSLAAELPLVPLPYLLLPSYSADDPRILYSSGTTGPRNAQ 328


>gi|47551119|ref|NP_999734.1| katanin p80 WD40-containing subunit B1 [Strongylocentrotus
           purpuratus]
 gi|60390160|sp|O61585|KTNB1_STRPU RecName: Full=Katanin p80 WD40-containing subunit B1; Short=Katanin
           p80 subunit B1; AltName: Full=p80 katanin
 gi|3005601|gb|AAC09329.1| katanin p80 subunit [Strongylocentrotus purpuratus]
          Length = 690

 Score = 46.6 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 88/237 (37%), Gaps = 44/237 (18%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSP--------------ASWRKIAHTIS 159
           GRV+  G +  +V   LW V  +  II     +SP              A  +     I 
Sbjct: 29  GRVMVTGGEDKKVN--LWAVGKQNCIISLSGHTSPVDSVKFNSSEELVVAGSQSGTMKIY 86

Query: 160 D----DIYQSITGEKG-----DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           D     I +++TG +      DF+    FV+       +K  L  + R G    Y     
Sbjct: 87  DLEPAKIVRTLTGHRNSIRCMDFHPFGEFVASGSTDTNVK--LWDVRRKG--CIYTYKGH 142

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
              +   +FSP+ + +  A+ D      + L D  + +  +   N    +    F  N +
Sbjct: 143 SDQVNMIKFSPDGKWLVTASEDT----TIKLWDLTMGKLFQEFKNHTGGVTGIEFHPN-E 197

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDRE 323
             L S   D  +  +  DL++    +L ++     SA    S+ PD S + F S ++
Sbjct: 198 FLLASGSSDRTVQFW--DLET---FQLVSSTSPGASAVRSISFHPDGSYL-FCSSQD 248



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 68/227 (29%), Gaps = 14/227 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+G     + +      N           +   +F  N  +           +++Y  D 
Sbjct: 33  VTGGEDKKVNLWAVGKQNCIISLSGHTSPVDSVKF--NSSEELVVAGSQSGTMKIY--DL 88

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  + +   R+ I    F   G+    S   D  + ++ V  +        ++  +N
Sbjct: 89  EPAKIVRTLTGHRNSIRCMDFHPFGEFVA-SGSTDTNVKLWDVRRKGCIYTYKGHSDQVN 147

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           +   +SPD   +V  S+      + +         +  ++         + P   L+A  
Sbjct: 148 M-IKFSPDGKWLVTASE---DTTIKLWDLTMGKLFQEFKNHTGGVTGIEFHPNEFLLASG 203

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRK 409
                   +     +  Q           +++ ++ P G  L  S +
Sbjct: 204 SSDRT---VQFWDLETFQLVSSTSPGASAVRSISFHPDGSYLFCSSQ 247


>gi|312379161|gb|EFR25529.1| hypothetical protein AND_09064 [Anopheles darlingi]
          Length = 1038

 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 62/179 (34%), Gaps = 22/179 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---------ISA 307
           +S +    FS +G+  + +   D  ++++  +  +    +       +         +S 
Sbjct: 661 KSHVECAMFSPDGQYLV-TGSVDGFIEVW--NFTTGKIRKDLKYQAQDNFMMMEQAILSM 717

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++S DS  +   S+ +G+ +++ +   G   +R  +          +S     I    F 
Sbjct: 718 AFSRDSEMLATGSN-DGQIKVWKL-VTGQCLRRFEKAHSKGVTCLHFSRDNSQILTASFD 775

Query: 368 GEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                I +      +         S +    +SP G  ++ +     D   K++S+   
Sbjct: 776 ---HLIRLYGLKSGKMLKEFRGHSSFVNEAAFSPDGHHVLSASS---DGTVKVWSLKTT 828



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 62/181 (34%), Gaps = 13/181 (7%)

Query: 186 SGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           +G     + V     G  +R    +  + +    FS +  ++  A++D      + L   
Sbjct: 728 TGSNDGQIKVWKLVTGQCLRRFEKAHSKGVTCLHFSRDNSQILTASFDH----LIRLYGL 783

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLF 302
           +  +  K      S +    FS +G   L S   D  + ++S+      +  + L   L 
Sbjct: 784 KSGKMLKEFRGHSSFVNEAAFSPDGHHVL-SASSDGTVKVWSLKTTECISTFKALGTHLA 842

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDL 360
           +N       +    V  +       + +M   G   +  S  K    ++     SP+G+ 
Sbjct: 843 VNSVLILPKNPEHFVVCNH---SNTVVIMNMQGQIVRSFSSGKREGGAFICATISPRGEF 899

Query: 361 I 361
           I
Sbjct: 900 I 900


>gi|312131420|ref|YP_003998760.1| ompa/motb domain protein [Leadbetterella byssophila DSM 17132]
 gi|311907966|gb|ADQ18407.1| OmpA/MotB domain protein [Leadbetterella byssophila DSM 17132]
          Length = 532

 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 84/229 (36%), Gaps = 28/229 (12%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S+DI+ +  G+ G + S         ++    N L  +  DG            ++    
Sbjct: 61  SNDIWYTEKGKDGKWVS--AKRMPRQLNRDRYNDLFYISPDGNTAIIRGEYEKGVINM-- 116

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ- 277
                 KV  +    +  +       +I    K++   +  IL    S+NGK  ++S   
Sbjct: 117 -----DKVGLSIIKKKGSVWQNPEALKIPGLSKKV---KGPILTATMSNNGKVIILSFSE 168

Query: 278 --KDEAMDIYS--VDLQSNATERLTNTLFINI-----SASYSPDSSQIVFESDR---EGK 325
                  D+Y   +D Q N +E  +    IN      S   S D+S + F S+R   EG 
Sbjct: 169 KKGGGDDDLYVTLMDKQGNWSELKSLGKDINTGDVECSPYLSADNSTLYFASNRKGGEGG 228

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             +++ +  G      S  K  +   P  + + D + +T  S  ++A  
Sbjct: 229 YDIWMSRRRGKGW--FSWTKPVNL-GPHINSKEDEMYYTMESSGEYAYF 274


>gi|300781931|ref|YP_003739166.1| hypothetical protein EbC_pEb10201100 [Erwinia billingiae Eb661]
 gi|299060197|emb|CAX53388.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 332

 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 58/170 (34%), Gaps = 6/170 (3%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
              +   S + K A+ S    E  D+   DL +    ++        +A +SPD  + +F
Sbjct: 36  HNNSLAVSPDEKTAVASYS--ERSDVVVYDLAAGKVRKVMKGYVTPRNALFSPDG-KAIF 92

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SD      +  + +   D          + F    S  G  +     +    ++  +  
Sbjct: 93  LSDSS-LGVVKKISTGTLDVAATLPLGPGA-FGTAISRDGQRLYVNNEAASTLSVYDLTH 150

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           D     +       Q    SP G+++ +     GD  + + ++  + R E
Sbjct: 151 DRPIAVVTGFAQPRQGIKISPDGKTV-YVTNFKGDKITLVDAVTGDIRGE 199



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 36/222 (16%), Positives = 73/222 (32%), Gaps = 18/222 (8%)

Query: 161 DIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+  ++    G F + I    + + V+    ++L V D        +     Q     + 
Sbjct: 110 DVAATLPLGPGAFGTAISRDGQRLYVNNEAASTLSVYDLTHDRPIAVVTGFAQPRQGIKI 169

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + V    +      ++ L+D         I  F S + A   S++G+         
Sbjct: 170 SPDGKTVYVTNF---KGDKITLVDAVTGDIRGEITGF-SKLRAISVSADGRTLY--AANS 223

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +  I  VD        +T T+ +       + +PD+  +   S   G   L V+ +   
Sbjct: 224 GSNTIAVVD---TQKHVITATIPVGQDPYGAALTPDNRYVY--SGNLGDNSLSVIDTAAG 278

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                    +A     V++  G          +  +I V+  
Sbjct: 279 KVVSTVTGLDAPRQAIVFNKDGTR---AWVLNKDLSIAVVDL 317


>gi|171911045|ref|ZP_02926515.1| hypothetical protein VspiD_07715 [Verrucomicrobium spinosum DSM
           4136]
          Length = 693

 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 5/96 (5%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             QLYV+ +     +R   ++  SY  P+ SP G  I FT    +  A+  +  DG+  R
Sbjct: 83  TGQLYVLDTEDGKGQRCLLEEVTSYAKPMLSPDGRQIVFTNLDQK--AVFAVNFDGTGLR 140

Query: 385 LLVEDSNLQAPTWSP--SGRSLIFSRKKDGDTGSKL 418
            LVE        W P  S   +   +      G  +
Sbjct: 141 KLVEGYASDV-WWDPGTSHTWVYVRQGYRDTRGGVI 175



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 75/230 (32%), Gaps = 33/230 (14%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +      ++Y++DT   +  + +    +    P  S +G++ + +    +   +++V+  
Sbjct: 78  FVQGKTGQLYVLDTEDGKGQRCLLEEVTSYAKPMLSPDGRQIVFT--NLDQKAVFAVNFD 135

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASY 349
                +L      ++   + P  +   +   R+G        + G   + R+   K    
Sbjct: 136 GTGLRKLVEGYASDV--WWDP-GTSHTWVYVRQGYR-----DTRGGVIRCRLDNPKVVEK 187

Query: 350 FDPVWSPQGD-LIAFTKFSGEKF---------AIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                +P G   I++ + S +            +G+          L        P  +P
Sbjct: 188 VWQA-APTGQPFISYFQLSRDGSAAVDTFPWPQVGLANIAEGGYSAL---GKGCWPGIAP 243

Query: 400 S--GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS----DPQWV 443
               R   F+   +    S  ++     R  ++   P  +S     P+W 
Sbjct: 244 DDSDRCFYFTGTHNAIVLSDTFA--KTTRTISMTTMPGLSSSTAFHPRWS 291



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 75/244 (30%), Gaps = 31/244 (12%)

Query: 192 SLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            L V+D  DG   R L         +P  SP+ +++ +   D + +  V    T +    
Sbjct: 85  QLYVLDTEDGKGQRCLLEEVTSYA-KPMLSPDGRQIVFTNLDQKAVFAVNFDGTGL---R 140

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASY 309
           K +  + S +    +   G        +         D +      RL N   +      
Sbjct: 141 KLVEGYASDVW---WDP-GTSHTWVYVRQGYR-----DTRGGVIRCRLDNPKVVEKVWQA 191

Query: 310 SPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW----SPQGDLIAF 363
           +P        F+  R+G   +            I++   ++     W        D   +
Sbjct: 192 APTGQPFISYFQLSRDGSAAVDTFPWPQVGLANIAEGGYSALGKGCWPGIAPDDSDRCFY 251

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-------EDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
             F+G   AI +        R +          S    P WS +   ++     +G   +
Sbjct: 252 --FTGTHNAIVLSDTFAKTTRTISMTTMPGLSSSTAFHPRWS-NHPRILTVTAPEGKPDT 308

Query: 417 KLYS 420
           +LY+
Sbjct: 309 ELYA 312


>gi|134082064|emb|CAK42183.1| unnamed protein product [Aspergillus niger]
          Length = 583

 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 51/155 (32%), Gaps = 12/155 (7%)

Query: 256 FRSMILAPRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             S++   RFS +GK       +     D         LQ    ++  N      S  +S
Sbjct: 276 HDSVVCCVRFSRDGKYLATGCNRSAQIFDVTTGQNVATLQDENVDK--NGDLYIRSVCFS 333

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +   ++    +Q+ V   N    K I    E   +   ++  G  IA +    + 
Sbjct: 334 PDGKYLATGAE---DKQIRVWDINARTIKHIFTGHEQDIYSLDFAGNGRYIA-SGSGDKT 389

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +  +  DG     L  +  +     SP G  + 
Sbjct: 390 VRLWDI-LDGKLVYTLSIEDGVTTVAMSPDGHYVA 423


>gi|114676524|ref|XP_001153168.1| PREDICTED: WD repeat-containing protein 88 [Pan troglodytes]
          Length = 472

 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 94/268 (35%), Gaps = 32/268 (11%)

Query: 186 SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG    ++ + D  DG+ +R         + E   + +  +V  A+YD      V   D 
Sbjct: 119 SGSYDCTVKLWDPVDGSVVRDFEHRPKAPVVECSITADSSRVIAASYDK----TVRAWDL 174

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTL 301
              +   ++  + + I++ +FS +GK  +     D    I  +D ++  T  +    +T 
Sbjct: 175 ETGKLLWKV-RYDTFIVSCKFSPDGKYVVSGFDVDHG--ICIMDAENITTVSVIKDHHTR 231

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGD 359
            I  S  + PDS ++   S DR     + +           I++    +  +  ++  G 
Sbjct: 232 SI-TSCCFDPDSQRVASVSLDR----CIKIWDVTSQATLLTITKAHSNAISNCCFTFSGH 286

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQER-----LLVEDSNLQAPT---WSPSGRSLIFSRKKD 411
            +  + +      + +      + R     + +   +  + +   ++     LI      
Sbjct: 287 FLCTSSWDK---NLKIWNVHTGEFRNRGACVTLMQGHEGSVSSCHFARDSSFLI---SGG 340

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASD 439
            D    ++ +    R  +L     +  D
Sbjct: 341 FDRTVAIWDVAEGYRKLSLKGHNDWVMD 368


>gi|16126906|ref|NP_421470.1| hypothetical protein CC_2671 [Caulobacter crescentus CB15]
 gi|221235689|ref|YP_002518126.1| aminoacyl peptidase [Caulobacter crescentus NA1000]
 gi|13424254|gb|AAK24638.1| conserved hypothetical protein [Caulobacter crescentus CB15]
 gi|220964862|gb|ACL96218.1| aminoacyl peptidase [Caulobacter crescentus NA1000]
          Length = 819

 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 75/217 (34%), Gaps = 33/217 (15%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN- 299
             D    +         +  LAP +S +G +    +   ++++++ VD+++    + ++ 
Sbjct: 107 FQDVATGKTRAVALPAGARFLAPSWSPDGGKMAFIMDGKQSLELWVVDVKAATARKASDI 166

Query: 300 ------TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDP 352
                     +    + PD S  + ++   G+    V     S    + S+ + A+    
Sbjct: 167 AISGVFGAGYD----WLPDGSGFLVQAVPTGRGAPPVKDLTPSGPTIQESKGRTAAIRTY 222

Query: 353 VWSPQGDLIAFTKFSGEKFAIG------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                   +         F          +     +   + +   + + + SP G+ ++ 
Sbjct: 223 ------QDLLTNAHDEALFDYYFTAQLTRVDLADGKATAVGKPGIISSFSVSPDGQYVLT 276

Query: 407 SRKK--------DGDTGSKLYSIDLNGRN-ETLINTP 434
           +R K         G   +++    + G+  +TL++ P
Sbjct: 277 NRLKRPYSYLVPAGQFPTEIAVSTIGGQPVKTLVDRP 313



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 33/213 (15%), Positives = 59/213 (27%), Gaps = 47/213 (22%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--RFSSNGKRA 272
             P +SP+  K+A+   D +  L ++++D +   A K      S +      +  +G   
Sbjct: 127 LAPSWSPDGGKMAFI-MDGKQSLELWVVDVKAATARKASDIAISGVFGAGYDWLPDGSGF 185

Query: 273 LISVQKDEAMDIYSVDLQSNATE----------------RLTNTLFINISASYSPDSSQI 316
           L+             DL  +                    LTN    +  A +       
Sbjct: 186 LVQAVPTGRGAPPVKDLTPSGPTIQESKGRTAAIRTYQDLLTNA---HDEALFD-----Y 237

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--------G 368
            F +      QL  +         +   K         SP G  +   +           
Sbjct: 238 YFTA------QLTRVDLADGKATAV--GKPGIISSFSVSPDGQYVLTNRLKRPYSYLVPA 289

Query: 369 EKF--AIGVMKKDGSQERLLVEDSNLQA--PTW 397
            +F   I V    G   + LV+        P +
Sbjct: 290 GQFPTEIAVSTIGGQPVKTLVDRPLADNLPPAF 322


>gi|304410962|ref|ZP_07392579.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           baltica OS183]
 gi|307304868|ref|ZP_07584618.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           baltica BA175]
 gi|304350859|gb|EFM15260.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           baltica OS183]
 gi|306912270|gb|EFN42694.1| peptidase S9B dipeptidylpeptidase IV domain protein [Shewanella
           baltica BA175]
          Length = 771

 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 59/193 (30%), Gaps = 53/193 (27%)

Query: 261 LAPR---FSSNGKRALISVQKDEA---MDIYSVDLQSNATERL-------TNTLFINISA 307
            +PR    S +G R      + +     D++ +D++S  +  L       TN L     A
Sbjct: 65  TSPRGLKLSPDGLRVTYLAGRKDNQSFYDLWQMDVKSGESSLLLNADKLATNELSDEEKA 124

Query: 308 S--------------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                          +  D SQ +          LY      +   ++    E    D  
Sbjct: 125 RRERQRIYGEGIMEYFWADDSQALLI---PASGNLYYFSLVDNSVTQL-PIGEGFATDAR 180

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS------------------NLQAP 395
            SP+G  ++F +       + V+     + + +  D                    +   
Sbjct: 181 LSPKGHFVSFVRDQ----NLYVLDLATKKLQAMTTDGGGAIKNAMAEFVAQEEMDRMTGY 236

Query: 396 TWSPSGRSLIFSR 408
            W+P   ++ F+R
Sbjct: 237 WWAPDESAIAFTR 249



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 67/162 (41%), Gaps = 13/162 (8%)

Query: 207 TPSRDQILFEPR--FSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRS----- 258
           +  + + ++ PR  + P+ + +++     D+  L + L+       PK +   RS     
Sbjct: 307 SKDKSKDIYLPRVDWLPDSKHLSFQWQSRDQHQLDLQLVALDALTKPKTLVKERSDAWVN 366

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
           +     F       + + ++D    +Y  DL+     +LT   +      Y  +++  V+
Sbjct: 367 LNNDLHFLKQQSAFIWASERDGFNHLYLFDLKGKLKTQLTKGEWAVDELEYIDETAGWVY 426

Query: 319 ESDREGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            + R+      QLY +   G   +R+S  K+A   +PV++  
Sbjct: 427 FTGRKDTPIEKQLYRVPLAGGKVERVS--KQAGMHNPVFADN 466



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 46/331 (13%), Positives = 106/331 (32%), Gaps = 72/331 (21%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS---DDIYQSITGEKGDFNSRILFVSESV 184
           F L D    +  IG+ F ++ A      H +S   D     +     D  ++ L    + 
Sbjct: 159 FSLVDNSVTQLPIGEGF-ATDARLSPKGHFVSFVRDQNLYVL-----DLATKKLQAMTTD 212

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-----V 239
             G IKN++           ++       +    ++P++  +A+   D+  + +     +
Sbjct: 213 GGGAIKNAM---------AEFVAQEEMDRMTGYWWAPDESAIAFTRIDESAVEQVTRNEI 263

Query: 240 YLMDTRIDRAPKRIGNFRSMILA------------------------------PR--FSS 267
           Y    ++           ++ +A                              PR  +  
Sbjct: 264 YADGIKLTEQRYPAAGKNNVDIALGVVTLKDKAINWVSLREENSKDKSKDIYLPRVDWLP 323

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----------FINISASYSPDSSQI 316
           + K      Q   + D + +DLQ  A + LT               +N    +    S  
Sbjct: 324 DSKHLSFQWQ---SRDQHQLDLQLVALDALTKPKTLVKERSDAWVNLNNDLHFLKQQSAF 380

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IG 374
           ++ S+R+G   LY+    G  + ++++ + A             + FT          + 
Sbjct: 381 IWASERDGFNHLYLFDLKGKLKTQLTKGEWAVDELEYIDETAGWVYFTGRKDTPIEKQLY 440

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +   G +   + + + +  P ++   +S+ 
Sbjct: 441 RVPLAGGKVERVSKQAGMHNPVFA-DNQSVY 470



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/224 (13%), Positives = 69/224 (30%), Gaps = 46/224 (20%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF--- 302
           +D +  ++          R S  G        ++    +Y +DL +   + +T       
Sbjct: 162 VDNSVTQLPIGEGFATDARLSPKGHFVSFVRDQN----LYVLDLATKKLQAMTTDGGGAI 217

Query: 303 --------------INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                               ++PD S I F             + + S  +++++++  +
Sbjct: 218 KNAMAEFVAQEEMDRMTGYWWAPDESAIAFT------------RIDESAVEQVTRNEIYA 265

Query: 349 YF----DPVWSPQGDL---IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                 +  +   G     IA    + +  AI  +       +   +D  L    W P  
Sbjct: 266 DGIKLTEQRYPAAGKNNVDIALGVVTLKDKAINWVSLREENSKDKSKDIYLPRVDWLPDS 325

Query: 402 RSLIF--SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           + L F    +       +L ++D   + +TL+          WV
Sbjct: 326 KHLSFQWQSRDQHQLDLQLVALDALTKPKTLVK----ERSDAWV 365


>gi|303243064|ref|ZP_07329514.1| hypothetical protein AceceDRAFT_4863 [Acetivibrio cellulolyticus
           CD2]
 gi|302589399|gb|EFL59197.1| hypothetical protein AceceDRAFT_4863 [Acetivibrio cellulolyticus
           CD2]
          Length = 368

 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 67/157 (42%), Gaps = 24/157 (15%)

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +   +YS+D +    +++T     N     + D   I +  D +GK   YV+  +G+++ 
Sbjct: 112 DNSKLYSMDYKGKNIKKITEDSVFN----IATDGRDICYN-DYDGKN--YVIGLDGTNKI 164

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWS 398
            +S+ K               + ++   G    I  +K DG++   + +      P  ++
Sbjct: 165 ELSKVKSNDLKILD-----KSVYYSADDG----IYKIKTDGTEAIKISD----IVPNMFT 211

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRN-ETLINTP 434
            +   + FS   +   G  +YS++L+G N   + +TP
Sbjct: 212 VNQGMIYFSTISEDKKG--VYSMNLDGSNCVKIFDTP 246



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 97/261 (37%), Gaps = 40/261 (15%)

Query: 174 NSRILFVSESV----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
            S+I  V  +      +    + L  MD  G NI+ +T      +       + + + Y 
Sbjct: 93  ASKIYMVENNGNIYFPNFTDNSKLYSMDYKGKNIKKITEDSVFNIAT-----DGRDICYN 147

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            YD ++ +       +I+ +  +  + + +  +  +S++          D    IY +  
Sbjct: 148 DYDGKNYVIGLDGTNKIELSKVKSNDLKILDKSVYYSAD----------DG---IYKIKT 194

Query: 290 QSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
                 +++     +I  + ++ +   I F +  E K+ +Y M  +GS+  +I  D   +
Sbjct: 195 DGTEAIKIS-----DIVPNMFTVNQGMIYFSTISEDKKGVYSMNLDGSNCVKI-FDTPIN 248

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIF 406
            F       G++  +           ++      ++ L + S  +  T  +      + F
Sbjct: 249 NFKIA---NGEMFFYDVNDKNCLHKLLIN-----DKKLTKLSTYELNTGAFDIKDNQIYF 300

Query: 407 SRKKDGDTGSKLYSIDLNGRN 427
               + D  S LY ++++G N
Sbjct: 301 ISSSESDK-SALYKMNIDGTN 320



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 80/237 (33%), Gaps = 27/237 (11%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV---AYATYDDEDILRVYLMDTRID 247
             +C  D DG N        ++I      S + + +    Y + DD     +Y + T   
Sbjct: 142 RDICYNDYDGKNYVIGLDGTNKIELSKVKSNDLKILDKSVYYSADDG----IYKIKTDGT 197

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A K      +M     F+ N      S   ++   +YS++L  +   ++ +T   N   
Sbjct: 198 EAIKISDIVPNM-----FTVNQGMIYFSTISEDKKGVYSMNLDGSNCVKIFDTPINNFK- 251

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
               +     F  D   K  L+ +  N    K++++          +  + + I F   S
Sbjct: 252 --IANGEM--FFYDVNDKNCLHKLLIND---KKLTKLSTYELNTGAFDIKDNQIYFISSS 304

Query: 368 -GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +K A+  M  DG+    +V+            G  +            +LY + L
Sbjct: 305 ESDKSALYKMNIDGTNINKIVDIDATSIQAI---GEYVYC---YHPSYTGRLYIVSL 355


>gi|262382433|ref|ZP_06075570.1| dipeptidyl peptidase IV [Bacteroides sp. 2_1_33B]
 gi|262295311|gb|EEY83242.1| dipeptidyl peptidase IV [Bacteroides sp. 2_1_33B]
          Length = 804

 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 83/271 (30%), Gaps = 26/271 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   K+    M R   N   L   + + +    +SP+ +  A    D   +  ++++++ 
Sbjct: 204 TDGEKDFGFGMPRTFLNTDTLCDHKRKYVMG-NWSPDGRYFAATLSDQRAVQDLWVINSI 262

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--------LQSNATERL 297
               P  +  ++  +     S      L  ++         VD        L S   +  
Sbjct: 263 AKPRPT-LETYKYQMPGEAGSPIVHLYLFDLENTGKRKEIRVDCFKDQTINLASKPDKER 321

Query: 298 TNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP--- 352
           T    +  ++ +  D+        S    +  +          K I +++  +  +    
Sbjct: 322 T---GLTRNSIWLGDNQTFYLTRVSRDMKRVDICSYTIGEDSVKAIIEERLNTSMETRPL 378

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG--RSLIFSRK- 409
             +  G  +           + +    G+ +  + +               R + F    
Sbjct: 379 AMTDNGKELIHWSERDGWAHLYLYDAQGNLKNRITKGPWHVDAIVDVDSKNRVVYFKANA 438

Query: 410 -KDGDTGS---KLYSIDLNGRNETLINTPAY 436
            + GDT      LY ++L+G    LI TP  
Sbjct: 439 REKGDTTPYYEHLYRVNLDGSGLKLI-TPGD 468



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 61/180 (33%), Gaps = 22/180 (12%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESDREGK 325
           + +    S++       +S D  S+   R+T          A+ SPD  ++VF  D    
Sbjct: 119 DDRTFTFSIKGTNGNYFFSYDYPSSRLTRITKDEIPAKIRWANISPDKKRVVFAKD---- 174

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             LYVM     + K +   ++ +  +   +  G+           F  G+ +   + + L
Sbjct: 175 LNLYVMSYEDYE-KAVKDPEDKTISEIALTTDGEK---------DFGFGMPRTFLNTDTL 224

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-----PAYASDP 440
                      WSP GR    +   D      L+ I+   +    + T     P  A  P
Sbjct: 225 CDHKRKYVMGNWSPDGRYFA-ATLSDQRAVQDLWVINSIAKPRPTLETYKYQMPGEAGSP 283



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 71/233 (30%), Gaps = 38/233 (16%)

Query: 150 SWRKIAHTISD-------DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
             R  A T+SD        +  SI   +    +    +     S I+   L  ++  G  
Sbjct: 239 DGRYFAATLSDQRAVQDLWVINSIAKPRPTLETYKYQMPGEAGSPIVHLYLFDLENTGKR 298

Query: 203 IRYLTP---------------SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                                 R  +     +  + Q   Y T    D+ RV +    I 
Sbjct: 299 KEIRVDCFKDQTINLASKPDKERTGLTRNSIWLGDNQT-FYLTRVSRDMKRVDICSYTIG 357

Query: 248 RAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
               +      +  +          NGK  +   ++D    +Y  D Q N   R+T    
Sbjct: 358 EDSVKAIIEERLNTSMETRPLAMTDNGKELIHWSERDGWAHLYLYDAQGNLKNRITKGP- 416

Query: 303 INISASYSPDSSQIV--FESDREGK-------EQLYVMQSNGSDQKRISQDKE 346
            ++ A    DS   V  F+++   K       E LY +  +GS  K I+    
Sbjct: 417 WHVDAIVDVDSKNRVVYFKANAREKGDTTPYYEHLYRVNLDGSGLKLITPGDY 469


>gi|256423037|ref|YP_003123690.1| peptidase S9B dipeptidylpeptidase IV domain protein [Chitinophaga
           pinensis DSM 2588]
 gi|256037945|gb|ACU61489.1| peptidase S9B dipeptidylpeptidase IV domain protein [Chitinophaga
           pinensis DSM 2588]
          Length = 732

 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 52/289 (17%), Positives = 99/289 (34%), Gaps = 53/289 (18%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPS-RDQILFEPRFSPNQQKVAYATYDD---EDI 236
           ++ V     +    V+D     +  L        L   +FSP+ QKVAY +  +   E++
Sbjct: 98  AQKVWRYKTRGDYWVLDIASGKLVQLGKGLPASSLMFAKFSPDGQKVAYVSEHNLYVEEL 157

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMIL--------APRFSSNGKRALIS-VQKDEAMDIYSV 287
               +     D   + I                  R+S + +      +   +  D   +
Sbjct: 158 ATHKIKALTKDGTRRLINGTFDWAYEEEFDCRDGFRWSPDSRAIAYWQIDARKIRDFLMI 217

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQ-----IVFESDREGKEQLYVMQSNGSDQKRIS 342
           D         T++L+        P + +      V   D    + +++     + Q  I+
Sbjct: 218 DN--------TDSLYSYTVPVEYPKAGESPSACRVGVVDITTAKTIWLQVPGDAQQHYIT 269

Query: 343 QDKEASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------ 394
           + +        W+P   G ++        +  +        +   L ++S+         
Sbjct: 270 RME--------WNPARTGLILQQLNRKQNQSILYTANPTTGKTTELYKESDSAWIDIRSR 321

Query: 395 -------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
                    W+  G+S I+  +KDG     LYSID+NG+ ETLI TP  
Sbjct: 322 WNDELAGWDWTNGGKSFIWVSEKDG--WRHLYSIDMNGK-ETLI-TPGQ 366


>gi|237811481|ref|YP_002895932.1| 6-phosphogluconolactonase [Burkholderia pseudomallei MSHR346]
 gi|237504273|gb|ACQ96591.1| 6-phosphogluconolactonase [Burkholderia pseudomallei MSHR346]
          Length = 411

 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D L V +R +D    +        +   S+ 
Sbjct: 33  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGLYV-YR-FDTDSGRVSPVSSAKAENPSYL 90

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 91  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 148

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 149 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 208

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 209 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 242

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    +  +       
Sbjct: 243 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLAHVETVPMTAPGF 302

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 303 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 347


>gi|47218966|emb|CAG02004.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 372

 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 58/383 (15%), Positives = 116/383 (30%), Gaps = 66/383 (17%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+V+  D + ++      +    + I NP     + +     A  +   
Sbjct: 9   FASLPQMERGVSKVIGGDPKGNNFLYTNGKSVIIRNIDNPTIAEIYTE----HAHQVTVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           +    G          + R+WD   ++ ++  ++     + + IA               
Sbjct: 65  KYSPSGFYIASGDASGKIRIWDTTQKEHLLKYEYQPISGTVKDIA--------------- 109

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDR---DGANIRYLTPSRDQILFEPRFSPNQQKVA 227
              +S+ + V+           L        D A    +  S D     P         +
Sbjct: 110 WTEDSKRMAVAGDGREKFAAVFLWDTGSSVGDLAAHSKVINSVDIRQKRPYRIITGSDDS 169

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            A++ +    +                +    +   RFS +G R  ++   D    I+  
Sbjct: 170 SASFFEGPPFKFKFTS----------SDHCKFVNCVRFSPDGSR-FVTAGADG--QIFVY 216

Query: 288 DLQSN-ATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           D  +     +L      N      S+SPDS+Q++  S   G + + +    G+     + 
Sbjct: 217 DGVTGDKVCQLGGEKAHNGGIYAVSWSPDSTQLISAS---GDKTVKLWDV-GAGTAVTTF 272

Query: 344 DKEASYFD----PVWSPQ-------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           D      D     +W             I +   +     I  +K      + L      
Sbjct: 273 DMGTDVNDQQLGCLWQKDHLLSISLSGYINYLDKNNCNRPIRTIKGHSKSIQCLTVHKC- 331

Query: 393 QAPTWSPSGRSLIFSRKKDGDTG 415
                   GRS+I+S   DG   
Sbjct: 332 -------DGRSVIYSGSHDGHIN 347



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 80/274 (29%), Gaps = 56/274 (20%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            S+ + + D   I  +       +   ++SP+   +A  + D    +R++    +     
Sbjct: 38  KSVIIRNIDNPTIAEIYTEHAHQVTVAKYSPSGFYIA--SGDASGKIRIWDTTQKEHLLK 95

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDE--------------------AMDIYSVDLQ 290
                    +    ++ + KR  ++    E                    +  I SVD++
Sbjct: 96  YEYQPISGTVKDIAWTEDSKRMAVAGDGREKFAAVFLWDTGSSVGDLAAHSKVINSVDIR 155

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                R+      + SAS+             EG    +            S D      
Sbjct: 156 QKRPYRIITG-SDDSSASFF------------EGPPFKFKFT---------SSDHCKFVN 193

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LL----VEDSNLQAPTWSPSGRSLI 405
              +SP G        +G    I V       +   L      +  + A +WSP    LI
Sbjct: 194 CVRFSPDGSRFV---TAGADGQIFVYDGVTGDKVCQLGGEKAHNGGIYAVSWSPDSTQLI 250

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                 GD   KL+ +   G   T  +     +D
Sbjct: 251 ---SASGDKTVKLWDV-GAGTAVTTFDMGTDVND 280


>gi|167737732|ref|ZP_02410506.1| hypothetical protein Bpse14_06685 [Burkholderia pseudomallei 14]
 gi|167910114|ref|ZP_02497205.1| hypothetical protein Bpse112_06458 [Burkholderia pseudomallei 112]
 gi|254195071|ref|ZP_04901500.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
 gi|169651819|gb|EDS84512.1| conserved hypothetical protein [Burkholderia pseudomallei S13]
          Length = 391

 Score = 46.6 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D + V +R +D    +        +   S+ 
Sbjct: 13  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYV-YR-FDTDSGRVSPVSSAKAENPSYL 70

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 71  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 128

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 129 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 188

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 189 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 222

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    +  +       
Sbjct: 223 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLVHVETVPMTAPGF 282

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 283 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 327


>gi|326333825|ref|ZP_08200058.1| hypothetical protein NBCG_05256 [Nocardioidaceae bacterium Broad-1]
 gi|325948407|gb|EGD40514.1| hypothetical protein NBCG_05256 [Nocardioidaceae bacterium Broad-1]
          Length = 338

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 35/258 (13%), Positives = 77/258 (29%), Gaps = 32/258 (12%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM-DRDGANI 203
            + P   R +     D +Y   +        R +                   + DG ++
Sbjct: 73  LADPGGARALTDLSCDRVYAQASFVSCLATERGVVSRYRATDLETSAPGERWREVDGTDL 132

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP------------- 250
             L           R SP+ + V+   + + D   V    TR                  
Sbjct: 133 PGLPSRT-------RISPDGRLVSSTVFVNGDSYMVSGFSTRTVVRRIGGKSYGDLEKFR 185

Query: 251 -----KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +R+      I    F+ + +    ++       +   DL + +   + + +    
Sbjct: 186 LVVDGRRVAPVDRNIWGVTFADDDRTFYATLATGGRTYLVRGDLSARSLTTIADHVEC-- 243

Query: 306 SASYSPDSSQIVF-ESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             S SPD ++I F E+  +G +    V+      +  ++ +  +      W    D + +
Sbjct: 244 -PSLSPDGTRIAFKEAVADGTRWTPAVLDLATGRRTVLAGETHSIDDQIEWLDD-DTVLY 301

Query: 364 TKFSGEKFAIGVMKKDGS 381
            +   ++    V   D S
Sbjct: 302 GRQRDDEPVSDVWSLDTS 319



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 29/212 (13%), Positives = 70/212 (33%), Gaps = 30/212 (14%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS------- 306
            +   +    R S +G+    +V  +    + S         R+    + ++        
Sbjct: 130 TDLPGLPSRTRISPDGRLVSSTVFVNGDSYMVSGFSTRTVVRRIGGKSYGDLEKFRLVVD 189

Query: 307 -------------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                         +++ D           G+  L     +      I+   E     P 
Sbjct: 190 GRRVAPVDRNIWGVTFADDDRTFYATLATGGRTYLVRGDLSARSLTTIADHVE----CPS 245

Query: 354 WSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRK 409
            SP G  IAF +    G ++   V+     +  +L  +++       W     ++++ R+
Sbjct: 246 LSPDGTRIAFKEAVADGTRWTPAVLDLATGRRTVLAGETHSIDDQIEWL-DDDTVLYGRQ 304

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           +D +  S ++S+D +   +  +   + A+ P 
Sbjct: 305 RDDEPVSDVWSLDTSASAKPRVLI-SEAASPA 335



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 58/174 (33%), Gaps = 16/174 (9%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F++R + V               +  DG  +  +  +   + F      +  +  YAT  
Sbjct: 164 FSTRTV-VRRIGGKSYGDLEKFRLVVDGRRVAPVDRNIWGVTFA-----DDDRTFYATLA 217

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQ 290
                 +     R D + + +      +  P  S +G R     +V          +DL 
Sbjct: 218 TGGRTYL----VRGDLSARSLTTIADHVECPSLSPDGTRIAFKEAVADGTRWTPAVLDLA 273

Query: 291 SNATERLT-NTLFINISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRI 341
           +     L   T  I+    +  D   +++   R+ +    ++ + ++ S + R+
Sbjct: 274 TGRRTVLAGETHSIDDQIEWL-DDDTVLYGRQRDDEPVSDVWSLDTSASAKPRV 326


>gi|313215005|emb|CBY41195.1| unnamed protein product [Oikopleura dioica]
 gi|313237442|emb|CBY12630.1| unnamed protein product [Oikopleura dioica]
          Length = 490

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 64/183 (34%), Gaps = 15/183 (8%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
               + +    FSP  + +A  + D        L D   +     +   +S ILA  ++ 
Sbjct: 116 QGHTEAILTVSFSPEGRYLASGSGDT----TTRLWDLTSESPEFTLEGHKSHILAISWAP 171

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP---DSSQIVFESDREG 324
           + K+   +  K   + ++S        + +T         ++ P   D S   F S  + 
Sbjct: 172 DSKKIC-TGCKSGQLRLWSPKTGKQTGKVMTGHKQWITGIAWEPLHQDGSCRRFISSSKD 230

Query: 325 KEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
              +  +       K I+  + ++S    VW   G  + +T       ++   + DG+  
Sbjct: 231 TNAI--IWDAVKQVKLITLSNHQSSVTAVVW--GGQGLIYTGSQDRVVSVW--RPDGTYC 284

Query: 384 RLL 386
           R L
Sbjct: 285 RAL 287



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 52/182 (28%), Gaps = 30/182 (16%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           + R    I      IL   FS  G+    S   D    ++ +  +S     L       +
Sbjct: 108 VTRCSSEIQGHTEAILTVSFSPEGRYLA-SGSGDTTTRLWDLTSESPEFT-LEGHKSHIL 165

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP---QG---D 359
           + S++PDS +I     + G+ +L+     G    ++    +       W P    G    
Sbjct: 166 AISWAPDSKKIC-TGCKSGQLRLW-SPKTGKQTGKVMTGHKQWITGIAWEPLHQDGSCRR 223

Query: 360 LIAFTKFSGEKFAIG-------VMKKD-----------GSQERLLVEDSNLQAPTWSPSG 401
            I  +        I        ++              G Q  +     +     W P G
Sbjct: 224 FI--SSSKDTNAIIWDAVKQVKLITLSNHQSSVTAVVWGGQGLIYTGSQDRVVSVWRPDG 281

Query: 402 RS 403
             
Sbjct: 282 TY 283



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 48/159 (30%), Gaps = 15/159 (9%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S  G   L S   D  + ++  + +     RLT          +SPD+  +   S     
Sbjct: 342 SIGGFERLCSASDDHTLFLWKPESEKKPLSRLTGHQATINDVKFSPDARYLASASF---D 398

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + +            +      +   WS    +I  +  S     +  +    S  +L
Sbjct: 399 KSVKLWCGKTGKFICAFRGHVRPVYTLAWSLDSRMIV-SGSSDSTLKLFEV----STRKL 453

Query: 386 LVEDSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           L +            WSP G+ +        D   +L+ 
Sbjct: 454 LKDLPGHADEVYGVDWSPDGQKVA---SGGKDRALRLWR 489



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 12/114 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAP 263
                  + + +FSP+ + +A A++D         +     +  K I  FR     +   
Sbjct: 373 LTGHQATINDVKFSPDARYLASASFDKS-------VKLWCGKTGKFICAFRGHVRPVYTL 425

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            +S +  R ++S   D  + ++ V  +    + L           +SPD  ++ 
Sbjct: 426 AWSLD-SRMIVSGSSDSTLKLFEVSTR-KLLKDLPGHADEVYGVDWSPDGQKVA 477


>gi|255012450|ref|ZP_05284576.1| dipeptidyl peptidase IV [Bacteroides sp. 2_1_7]
          Length = 804

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 35/271 (12%), Positives = 85/271 (31%), Gaps = 26/271 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   K+    M R   N   L   + + +    +SP+ +  A    D   +  ++++++ 
Sbjct: 204 TDGEKDFGFGMPRTFLNTDTLCDHKRKYVMG-NWSPDGRYFAATLSDQRAVQDLWVINSI 262

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--------LQSNATERL 297
               P  +  ++  +     S      L  ++         VD        L S   +  
Sbjct: 263 AKPRPT-LETYKYQMPGEAGSPIVHLYLFDLENTGKRKEIRVDCFKDQTINLASKPDKER 321

Query: 298 TNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP--- 352
           T    +  ++ +  D+        S    +  +          K I +++  +  +    
Sbjct: 322 T---GLTRNSIWLGDNQTFYLTRVSRDMKRVDICSYTIGEDSVKAIIEERLNTSMETRPL 378

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-SLIFS---R 408
             +  G  +           + +    G+ +  + +             R  +++     
Sbjct: 379 AMTDNGKELIHWSERDGWAHLYLYDAQGNLKNRITKGPWHVDAIVDVDSRNRVVYFKANA 438

Query: 409 KKDGDTGS---KLYSIDLNGRNETLINTPAY 436
           ++ GDT      LY ++L+G    LI TP  
Sbjct: 439 REKGDTTPYYEHLYRVNLDGSGLKLI-TPGD 468



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 61/180 (33%), Gaps = 22/180 (12%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESDREGK 325
           + +    S++       +S D  S+   R+T          A+ SPD  ++VF  D    
Sbjct: 119 DDRTFTFSIKGTNGNYFFSYDYPSSRLTRITKDEIPAKIRWANISPDKKRVVFAKD---- 174

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             LYVM     + K +   ++ +  +   +  G+           F  G+ +   + + L
Sbjct: 175 LNLYVMSYEDYE-KAVKDPEDKTISEIALTTDGEK---------DFGFGMPRTFLNTDTL 224

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-----PAYASDP 440
                      WSP GR    +   D      L+ I+   +    + T     P  A  P
Sbjct: 225 CDHKRKYVMGNWSPDGRYFA-ATLSDQRAVQDLWVINSIAKPRPTLETYKYQMPGEAGSP 283



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 71/233 (30%), Gaps = 38/233 (16%)

Query: 150 SWRKIAHTISDD-------IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
             R  A T+SD        +  SI   +    +    +     S I+   L  ++  G  
Sbjct: 239 DGRYFAATLSDQRAVQDLWVINSIAKPRPTLETYKYQMPGEAGSPIVHLYLFDLENTGKR 298

Query: 203 IRYLTP---------------SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                                 R  +     +  + Q   Y T    D+ RV +    I 
Sbjct: 299 KEIRVDCFKDQTINLASKPDKERTGLTRNSIWLGDNQT-FYLTRVSRDMKRVDICSYTIG 357

Query: 248 RAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
               +      +  +          NGK  +   ++D    +Y  D Q N   R+T    
Sbjct: 358 EDSVKAIIEERLNTSMETRPLAMTDNGKELIHWSERDGWAHLYLYDAQGNLKNRITKGP- 416

Query: 303 INISASYSPDSSQIV--FESDREGK-------EQLYVMQSNGSDQKRISQDKE 346
            ++ A    DS   V  F+++   K       E LY +  +GS  K I+    
Sbjct: 417 WHVDAIVDVDSRNRVVYFKANAREKGDTTPYYEHLYRVNLDGSGLKLITPGDY 469


>gi|171687070|ref|XP_001908476.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943496|emb|CAP69149.1| unnamed protein product [Podospora anserina S mat+]
          Length = 372

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/245 (13%), Positives = 81/245 (33%), Gaps = 46/245 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +F+     V YA+  + D +R   + T      +        +        G    IS  
Sbjct: 102 KFTHTSSSVIYASTRENDAIR--YLATHDSSFIRYFDGHEGAVTCLAMHP-GTDNFISCS 158

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS--ASYSPDSSQIVFESDREGKEQLY------ 329
            D  + ++     +  T+  T TL++N    +++ P        S   G   LY      
Sbjct: 159 LDNTVRLW-----NTQTKNWTGTLYLNTPYLSAWDPSGQVFAVASPSSGSILLYDYRNYH 213

Query: 330 --------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-------- 373
                   ++++ G     ++      +    +S  G  I         F +        
Sbjct: 214 KAPFSTFDLVKARGPADPEMAFRG---WTKLEFSNDGKHILLGSRGNGHFLLDSFDGSLK 270

Query: 374 -GVMKKDGSQERLLV---EDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             + K +G  +RL     +  ++++     ++P GR ++      G +   ++   +   
Sbjct: 271 AFLRKPNGGTKRLAAGENDGGHVESSGECCFTPDGRYVL----SGGKSDLLIWDTLMTPD 326

Query: 427 NETLI 431
           ++ ++
Sbjct: 327 SKQVL 331


>gi|116622861|ref|YP_825017.1| WD-40 repeat-containing protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116226023|gb|ABJ84732.1| WD-40 repeat protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 318

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 63/183 (34%), Gaps = 14/183 (7%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVF 318
           + A  FS +GK  +         ++   D  +    R    L   + A ++  DS+ I  
Sbjct: 3   VTAVAFSPDGKLVV----SGGYKELLLWDPSTGRLVRKIGKLSGQVRAIAFGADSNSIAV 58

Query: 319 ESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                G+   +  +         I Q K+       +S  G L+A T  +     I    
Sbjct: 59  ADGVPGRAGSVVQVDLQIGAITAIQQAKD-EMLAVAFSADGKLLA-TGGTDSIVRIYATG 116

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
            + +   L      +    +SP G+  +F+     D   +++  D     + +   PA  
Sbjct: 117 TNAAPIELKGHTGWISGVAFSPDGK--LFASG-SADKTVRVWKTD---TWKEVFQLPAQI 170

Query: 438 SDP 440
           ++P
Sbjct: 171 TEP 173



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 60/192 (31%), Gaps = 9/192 (4%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L + D     +          +    F  +   +A A         V  +D +I    
Sbjct: 21  KELLLWDPSTGRLVRKIGKLSGQVRAIAFGADSNSIAVADGVPGRAGSVVQVDLQIGAIT 80

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISAS 308
             I   +  +LA  FS++GK             I  +           L          +
Sbjct: 81  A-IQQAKDEMLAVAFSADGKLLA----TGGTDSIVRIYATGTNAAPIELKGHTGWISGVA 135

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPD       S  +   +++   +     +  +Q  E       ++ +GDL+AF     
Sbjct: 136 FSPDGKLFASGS-ADKTVRVWKTDTWKEVFQLPAQITE-PVSAVAFANEGDLLAFATGGP 193

Query: 369 EKFAIGVMKKDG 380
           ++ AI + +  G
Sbjct: 194 DERAIRIWRTQG 205



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 64/204 (31%), Gaps = 29/204 (14%)

Query: 192 SLCVMDRDGANIRYL-TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           S+  +   G N   +        +    FSP+ +   +A+   +  +RV+  DT  +   
Sbjct: 108 SIVRIYATGTNAAPIELKGHTGWISGVAFSPDGK--LFASGSADKTVRVWKTDTWKEVF- 164

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS-------VDLQSNATER---LTNT 300
           +        + A  F++ G     +    +   I          +L S    +   L  T
Sbjct: 165 QLPAQITEPVSAVAFANEGDLLAFATGGPDERAIRIWRTQGAFTELDSTRPGQRNGLMQT 224

Query: 301 LFINISA------SYS---PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
             I+  A      ++S   P S  +V  SD+          + G +            + 
Sbjct: 225 RPIDTGACLPLAVTFSKAQPHSRIVVGCSDKT-----VRFIAPGGNTIATGTGHGDWVYT 279

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGV 375
              SP G  IA +  +     I  
Sbjct: 280 VASSPDGTRIA-SAGADGTVKIWT 302


>gi|157115015|ref|XP_001652518.1| wd-repeat protein [Aedes aegypti]
 gi|108877052|gb|EAT41277.1| wd-repeat protein [Aedes aegypti]
          Length = 651

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/255 (14%), Positives = 84/255 (32%), Gaps = 29/255 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A+   +       ++   FSP++  +   + D      + L               +  +
Sbjct: 385 ADTSRMLYGHSGPVYRTAFSPDRTMLLSCSED----CTIRLWSLHTWTCVVVYKGHQFPV 440

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF- 318
              RFS  G    +S   D+   +++ D  S+   R+      ++    + P+S+ +   
Sbjct: 441 WDVRFSPYGHY-FLSCSHDKTARLWATD--SHQPLRIFAGHLSDVDVCIFHPNSNYVATG 497

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            SDR     + +   +  +  R+    +A      +S  G  +A          + +   
Sbjct: 498 SSDRT----VRLWDISVGNHVRLMTGHKAPIHALAFSICGRYLASGSAD---CRVLIWDL 550

Query: 379 DGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI-----DLNGRNETLI 431
                   +    +++ +  +S  G  L        D   KL+       D++G N  + 
Sbjct: 551 AHGHLIAALCGHSASVHSLCFSRDGVVLA---TGGLDCCLKLWDFSKLCEDISGENVNVS 607

Query: 432 NTPAYASDPQWVGFM 446
           + P    D +   ++
Sbjct: 608 HNP-DVRDGE--PYL 619


>gi|53718743|ref|YP_107729.1| hypothetical protein BPSL1108 [Burkholderia pseudomallei K96243]
 gi|52209157|emb|CAH35101.1| putative exported protein [Burkholderia pseudomallei K96243]
          Length = 411

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 51/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D L V +R +D    +        +   S+ 
Sbjct: 33  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGLYV-YR-FDTDSGRVSPVSSAKAENPSYL 90

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 91  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 148

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 149 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 208

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 209 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 242

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    +  +       
Sbjct: 243 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLAHVETVPMTAPGF 302

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 303 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 347


>gi|86141821|ref|ZP_01060345.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
 gi|85831384|gb|EAQ49840.1| OmpA family protein [Leeuwenhoekiella blandensis MED217]
          Length = 653

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 66/197 (33%), Gaps = 57/197 (28%)

Query: 296 RLTNTLFINISASYSPDSSQIVFESDRE-GKEQLYV---------------MQSNGSDQK 339
           R TN+   +    +  +  +++F S R+ G    Y+               + +   +  
Sbjct: 156 RRTNSRLSDFGPMFYEN--KLIFSSARDTGSTSKYIHKWNNEPFLDFYAAPIDAETGELG 213

Query: 340 RISQ------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV------ 387
            + +      +       P ++  G+ + FT+     F+ GV + D +    L       
Sbjct: 214 VVEKFGGDAINTRYHESSPTFTSDGNTMYFTR---NNFSNGVKRTDKNGTVRLKIFKSVK 270

Query: 388 ---------------EDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNE--- 428
                             ++  P  SP  + L F+    G  G S ++ +D+ G NE   
Sbjct: 271 KGGSWGAPVELPFNDNSYSVSHPALSPDNKQLYFASDMPGTVGFSDIWVVDIIGDNEYSE 330

Query: 429 -----TLINTPAYASDP 440
                 +INT    + P
Sbjct: 331 PKNLGPIINTEGRENFP 347



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 54/166 (32%), Gaps = 32/166 (19%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY----LMDTRID 247
            L V+++ G +              P F+ +   + +   +  + ++       +  +I 
Sbjct: 211 ELGVVEKFGGDAINTRYHESS----PTFTSDGNTMYFTRNNFSNGVKRTDKNGTVRLKIF 266

Query: 248 RAPKRIGNFRS-----------MILAPRFSSNGKRALISVQKDEA---MDIYSVDLQS-- 291
           ++ K+ G++ +            +  P  S + K+   +          DI+ VD+    
Sbjct: 267 KSVKKGGSWGAPVELPFNDNSYSVSHPALSPDNKQLYFASDMPGTVGFSDIWVVDIIGDN 326

Query: 292 -----NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                     + NT         S   + + F SD  G+  L  + 
Sbjct: 327 EYSEPKNLGPIINTEGRENFPFISKKGN-LYFSSD--GRPGLGGLD 369



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 54/153 (35%), Gaps = 34/153 (22%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS----------------NATERLT 298
           N R    +P F+S+G     + + + +  +   D                    A   L 
Sbjct: 224 NTRYHESSPTFTSDGNTMYFT-RNNFSNGVKRTDKNGTVRLKIFKSVKKGGSWGAPVELP 282

Query: 299 -NTLFINIS-ASYSPDSSQIVFESDREGK---EQLYVMQSNG----SDQKRISQ--DKEA 347
            N    ++S  + SPD+ Q+ F SD  G      ++V+   G    S+ K +    + E 
Sbjct: 283 FNDNSYSVSHPALSPDNKQLYFASDMPGTVGFSDIWVVDIIGDNEYSEPKNLGPIINTEG 342

Query: 348 SYFDPVWSPQGDLIAFTKFSG----EKFAIGVM 376
               P  S +G+L  +    G        I V+
Sbjct: 343 RENFPFISKKGNL--YFSSDGRPGLGGLDIYVV 373


>gi|332230004|ref|XP_003264176.1| PREDICTED: WD repeat-containing protein 38-like isoform 2 [Nomascus
           leucogenys]
          Length = 304

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 59/168 (35%), Gaps = 13/168 (7%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           VY  +TR  +   R+G     +   RFS +G     S   D  + +++V  ++     L 
Sbjct: 34  VYGWETRSGQLLWRLGGHTGPVKFCRFSPDG-HLFASASCDYTVRLWNV-ARAKCLRVLK 91

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  + S+SPDS Q+         +++ + +       R+      S     +SP  
Sbjct: 92  GHQRSVETVSFSPDSRQLA---SGGWDKRVMLWEVQSGQMLRLLVGHRDSVQSSDFSPTV 148

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV-----EDSNLQAPTWSPSG 401
           + +A   +      + +         +          N+    +SPSG
Sbjct: 149 NCLATGSWDST---VRIWDLRTGTPAVFHQALEGHSGNISCLCYSPSG 193



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 65/209 (31%), Gaps = 23/209 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +        +   RFSP+    A A+ D      V L +    +  + +   +  +    
Sbjct: 46  WRLGGHTGPVKFCRFSPDGHLFASASCD----YTVRLWNVARAKCLRVLKGHQRSVETVS 101

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS + ++   S   D+ + ++ V         L        S+ +SP  + +   S    
Sbjct: 102 FSPDSRQLA-SGGWDKRVMLWEVQ-SGQMLRLLVGHRDSVQSSDFSPTVNCLATGS---W 156

Query: 325 KEQLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              + +            Q       +     +SP G L+A   +      I + K   S
Sbjct: 157 DSTVRIWDLRTGTPAVFHQALEGHSGNISCLCYSPSG-LLASGSWDKT---IHIWKPTTS 212

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
              + ++             +S+ FS  +
Sbjct: 213 SLLIQLKGHVTWV-------KSIAFSADE 234


>gi|318058399|ref|ZP_07977122.1| putative peptidase [Streptomyces sp. SA3_actG]
          Length = 664

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 68/217 (31%), Gaps = 42/217 (19%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------- 264
             + +PR SP+   +AY +     ++       R   AP+       +            
Sbjct: 87  GPVIDPRPSPDGSMIAYVSEGALRLVDADGNGDRALAAPEEAQVTYGLAEFVAAEEMDRT 146

Query: 265 ----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               ++ +  R L++   +  +  +           + +    +   S            
Sbjct: 147 RGFWWAPDSARLLVARVDESPVQRWW----------IADPAHPDREPS--------AVAY 188

Query: 321 DREGKE----QLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGV 375
            R G      +L++    G   + +       Y   V WS  G  +   +   ++  + +
Sbjct: 189 PRAGTANADVRLFLHDLEGGRTEVVWDRVRYPYLARVHWSAAGAPLLLVQSRDQRAVLYL 248

Query: 376 -MKKDGSQERLLVEDSNLQ-------APTWSPSGRSL 404
            + ++    R++  D +         +P W+P G+ +
Sbjct: 249 GVDEESGATRMVHADEDPDWVELRGGSPAWTPDGKLV 285



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 20/67 (29%), Gaps = 6/67 (8%)

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +          R L     +  P  SP G  + +  +        L  +D +G  +  +
Sbjct: 69  RLWTTDLRSGASRALAVPGPVIDPRPSPDGSMIAYVSE------GALRLVDADGNGDRAL 122

Query: 432 NTPAYAS 438
             P  A 
Sbjct: 123 AAPEEAQ 129


>gi|302498784|ref|XP_003011389.1| NACHT and WD domain protein [Arthroderma benhamiae CBS 112371]
 gi|291174939|gb|EFE30749.1| NACHT and WD domain protein [Arthroderma benhamiae CBS 112371]
          Length = 1763

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 42/256 (16%), Positives = 91/256 (35%), Gaps = 33/256 (12%)

Query: 170  KGDFNSRILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
             G++ + I           +GI    +  +++ G  I  +  + + I+    F  N  ++
Sbjct: 1134 HGEWITSIKAAKARNLLASAGIHSIRIWDINQ-GTEICSIPRASESIVISLAFRSNDTEL 1192

Query: 227  AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMD 283
             YA  D   I  + L      +  + I    S    PR   FS + +R  +   +   + 
Sbjct: 1193 LYAD-DSFTIKCIDLDSREEKQILEAISTSESEYGPPRGIVFSPDSRRVAVVHPR-RPLQ 1250

Query: 284  IYSVDLQSNATERLTNTLFINISASY-------SPDSSQIVFESDREG----KEQLYVMQ 332
            I+ ++      ++      IN   ++       SP   +IV+  D  G       + ++ 
Sbjct: 1251 IWRINH-GKNPKQFIRKKAIN-KHNWGGKDIINSP--GKIVWRPDSSGILALYPGMLLID 1306

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---D 389
             N  D  + ++       + V S  G  +  T    +  +I          RL+ +   +
Sbjct: 1307 WNVDDDTQ-TEYSHIIAHEMVLSLDGKWLL-TSDHNDLLSIW----STDSFRLIYQLKYE 1360

Query: 390  SNLQAPTWSPSGRSLI 405
              ++  ++SP  R + 
Sbjct: 1361 GIVRDVSFSPDSRRIY 1376


>gi|241954428|ref|XP_002419935.1| RNA polymerase II Elongator subunit, putative [Candida dubliniensis
           CD36]
 gi|223643276|emb|CAX42150.1| RNA polymerase II Elongator subunit, putative [Candida dubliniensis
           CD36]
          Length = 797

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 87/226 (38%), Gaps = 25/226 (11%)

Query: 220 SPNQQKVAYA---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           SPN   +A A         ++RV+ +     ++ + +      I +  FS +GK  L +V
Sbjct: 573 SPNGNLIASACKSNSAKHAVIRVFNVAQDYQQSQQVLSGHNLTISSLEFSPDGKYLL-AV 631

Query: 277 QKDEAMDIYSVDLQSNATERLT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +D    ++ V  + +A+ +L          I    S+ P        S R+ + +L+ +
Sbjct: 632 SRDRQFSLWEVVNEQSASFKLVELNPKAHARILWDCSWLPVGDSFTTVS-RDKQIKLWKV 690

Query: 332 QSNGSDQKRISQDKEASYFDPVWSP---QGDLIAFTKFSGEKFAIGVMKKDGSQERL--- 385
            ++  +    ++  +A     V+         I          +I  +     + +L   
Sbjct: 691 SNDKVEMMASTKLNDAVTSVSVYKGSLFNNQAIVAVGLEDGGISIFAVDAANPEFKLISI 750

Query: 386 ----LVEDSNLQAPTWS---PSGRSLIFSRKKDGDTGSKLYSIDLN 424
               L   + ++  ++S    +G+ L+    K  DT ++LYSID  
Sbjct: 751 LDKELTPSNRIEKLSFSNKLHNGKLLLGVGSK--DTSARLYSIDST 794


>gi|190344916|gb|EDK36702.2| hypothetical protein PGUG_00800 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 912

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 75/224 (33%), Gaps = 21/224 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N+          +     + + + +A+ +     +L VY   +      K+ G+F S  
Sbjct: 291 FNLIQKLSMGQNAVNTVNINKSGEWLAFGSSTLGQLL-VYEWQSE-SYILKQQGHFDSTN 348

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S +G R ++S   D  + ++ V +       L          S++    Q++F S
Sbjct: 349 -CVCYSPDGSR-VVSASDDGKIKVWDV-VSGFCLVTLQEHTAAVTGLSFAKKG-QVLFSS 404

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G  + + +     + +  +  +   +      P G+++         F I V     
Sbjct: 405 SLDGTVRAWDL-IRFRNFRTFTATERVQFNCLAVDPSGEVVVAGSQD--TFEIFVWSVQT 461

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              +LL   S  + P        L F     G   S L S   +
Sbjct: 462 --AQLLDSLSGHEGPV-----SCLAF-----GSENSVLASASWD 493


>gi|148683736|gb|EDL15683.1| notchless homolog 1 (Drosophila) [Mus musculus]
          Length = 683

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 58/186 (31%), Gaps = 34/186 (18%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 103 VTRCTSSLEGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 158

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGS-DQKRISQDKEASYFDPVW-----S 355
            +S S+SPD  ++       G    Q+ +   +      R             W     +
Sbjct: 159 VLSISWSPDGKKLA-----SGCKNGQILLWDPSTGLQVGRTLTGHSKWITGLSWEPLHMN 213

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKD---------GSQERLLV-EDSNLQAPTWSPSGRSLI 405
           P+   +A +   G    + V             G  ER+L     ++    W   G  L+
Sbjct: 214 PECRYVASSSKDGS---VRVWDTTAGRFWDTTAGRCERILTGHTQSVTCLRWGGDG--LL 268

Query: 406 FSRKKD 411
           +S  +D
Sbjct: 269 YSASQD 274



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 538 GPERLVSGSDDFTLFLWSPAEDKKPLARMTGHQALINQVLFSPDSRIVASASF---DKSI 594

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 595 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLATDLPGH 653

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 654 ADEVYAVDWSPDGQRVA 670



 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 18/184 (9%), Positives = 51/184 (27%), Gaps = 20/184 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A      ++   +    + 
Sbjct: 131 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA---SGCKNGQILLWDPST 187

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDL-------QSNA 293
             +  + +      I    +     +   +    S  KD ++ ++               
Sbjct: 188 GLQVGRTLTGHSKWITGLSWEPLHMNPECRYVA-SSSKDGSVRVWDTTAGRFWDTTAGRC 246

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
              LT          +  D   +++ + ++    + V +++     R  Q          
Sbjct: 247 ERILTGHTQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMA 302

Query: 354 WSPQ 357
            S  
Sbjct: 303 LSTD 306



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 37/100 (37%), Gaps = 6/100 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++LF  +S +         +   DG   +YL         +++  +S + + +   + D 
Sbjct: 575 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS 634

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                + + D +  +    +      + A  +S +G+R  
Sbjct: 635 ----TLKVWDVKAQKLATDLPGHADEVYAVDWSPDGQRVA 670


>gi|134055281|emb|CAK96171.1| unnamed protein product [Aspergillus niger]
          Length = 312

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 41/264 (15%), Positives = 74/264 (28%), Gaps = 34/264 (12%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSR--------DQILFEPRFSPNQQKVAYATYDDED 235
           V + +  + L     DG    +   S+            F   +S + +         + 
Sbjct: 58  VFNPVRDSELASCSTDGTVRVWDVRSKTCVSRLDVGGEAFTLSWSADGR---VMIVGRKK 114

Query: 236 ILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                   T ++  P+ I      F   +  P  S +    L +   +  + I S     
Sbjct: 115 PTFTPSTYTALEPHPQPIQTNATTFSHHMSTPS-SPD--LHLFATTGEGTVKIISYP-SF 170

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEAS 348
                L       +S S +P    +       G     +   + +D   ++ +S +   +
Sbjct: 171 ANLHTLHAHTSACLSISLAPTGRYLAV-----GGSDALISLWDTTDWICKRTVSSNNGGA 225

Query: 349 YFDPVWSPQGDLIA----FTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSG 401
                WS  G  I          G    I   +   S   +       S + A  W PS 
Sbjct: 226 VRGVSWSFDGRFICGACDEVGCGGNGLEIFHAETGESVHTVPTGGNANSGIPAVAWHPSR 285

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNG 425
             L +S   DG     L  +   G
Sbjct: 286 YWLAYSTTADGSGPGGLRIVGAAG 309


>gi|254247593|ref|ZP_04940914.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
 gi|124872369|gb|EAY64085.1| conserved hypothetical protein [Burkholderia cenocepacia PC184]
          Length = 437

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 49/345 (14%), Positives = 102/345 (29%), Gaps = 33/345 (9%)

Query: 91  ITNPDSIPRFQDWNSLGAQV---LVTGRVIKEGKDRLRVEFRLWDVKDRKQ-IIGKKFFS 146
           + +  +   F   +S  A     L+ G     G D + V +R +D K      +      
Sbjct: 7   VLSLSATHAFAQQSSAPADGVYNLLVGTYTGGGSDGIYV-YR-FDTKSGSVAPVSSAKTV 64

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRY 205
           +P+         +      + G+ G    R    +          + +  +  +G +  Y
Sbjct: 65  NPSYLLPSRDGRTVYAVNELPGDDGPATQRGGVSAFRFDAKTGALSFIDRVSSEGNDPCY 124

Query: 206 LTPSRDQ-----ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           L  S D        +     P          DD  + +  L        P +     + +
Sbjct: 125 LALSPDGKYLVTANYSVAADPGGSFAVLPLRDDGAVGQAVLTVHHEGTGPVKGRQDGAHV 184

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISA-------SYSPD 312
            +  FS +G+   +     + +  Y   +         T+T +  + A        +S D
Sbjct: 185 HSTVFSPDGRYLFVQDLGADKIYGYRYTVDGSRGLISPTDTRYTPVKAGSGPRHMVFSAD 244

Query: 313 SSQIVFESDREGKEQLY------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
                  S+     +++      +               +        SP G  + +   
Sbjct: 245 GRFAYVTSELNASVEVFGYHDGKLTPIETLPMTAPGFKGKVGGGAIHLSPDGRFL-YASN 303

Query: 367 SGEKFAI---GVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLI 405
            G+   +    V K DG  + +  + S  + P      P+G+ LI
Sbjct: 304 RGDANDLVIYAVNKADGRLKHVGRQSSLGKTPREFLIDPTGKWLI 348



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 69/222 (31%), Gaps = 44/222 (19%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF---SSNGKRALIS---------V 276
            T    D + VY  DT+       + + +++   P +   S +G+               
Sbjct: 35  YTGGGSDGIYVYRFDTKSGS-VAPVSSAKTVN--PSYLLPSRDGRTVYAVNELPGDDGPA 91

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIV-----FESDREGKEQL 328
            +   +  +  D ++ A   +           Y   SPD   +V       +D  G   +
Sbjct: 92  TQRGGVSAFRFDAKTGALSFIDRVSSEGNDPCYLALSPDGKYLVTANYSVAADPGGSFAV 151

Query: 329 YVMQSNGS-DQKRISQDKEAS-----------YFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             ++ +G+  Q  ++   E +               V+SP G  +       +K      
Sbjct: 152 LPLRDDGAVGQAVLTVHHEGTGPVKGRQDGAHVHSTVFSPDGRYLFVQDLGADKIYGYRY 211

Query: 377 KKDGSQERL---------LVEDSNLQAPTWSPSGRSLIFSRK 409
             DGS+  +         +   S  +   +S  GR    + +
Sbjct: 212 TVDGSRGLISPTDTRYTPVKAGSGPRHMVFSADGRFAYVTSE 253


>gi|85094855|ref|XP_959961.1| hypothetical protein NCU06099 [Neurospora crassa OR74A]
 gi|28921419|gb|EAA30725.1| hypothetical protein NCU06099 [Neurospora crassa OR74A]
          Length = 676

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 70/184 (38%), Gaps = 19/184 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +S  S   + ++ ++  +G+    +T  ++  + +  +SPN ++             +
Sbjct: 243 VDKSNKSYYGETNMYLLSANGSFDARVTLDKEGPIHDVSWSPNSKEFGVVYGYMPAKTTI 302

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +          + +    S  L PR    FS  G+ AL++   + A  I   DL+     
Sbjct: 303 FNH--------RAVATH-SFPLGPRNTIIFSPTGRFALVAGFGNLAGQIDVYDLE-KDYR 352

Query: 296 RLTNTLFINIS-ASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           ++T     N S  ++SPDS  I     S R   +    +   G     +  +     ++ 
Sbjct: 353 KITTIESGNPSVCTWSPDSRYILTATTSPRLRVDNGIKLWHVGGGI--MYNEDMVELYNV 410

Query: 353 VWSP 356
           +W P
Sbjct: 411 IWRP 414



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 11/151 (7%)

Query: 277 QKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSN 334
                 ++Y +    +   R+T +        S+SP+S +  V       K  ++  ++ 
Sbjct: 249 SYYGETNMYLLSANGSFDARVTLDKEGPIHDVSWSPNSKEFGVVYGYMPAKTTIFNHRAV 308

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQ 393
            +    +           ++SP G       F      I V   +    ++   E  N  
Sbjct: 309 ATHSFPL-----GPRNTIIFSPTGRFALVAGFGNLAGQIDVYDLEKDYRKITTIESGNPS 363

Query: 394 APTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
             TWSP  R ++ +        D G KL+ +
Sbjct: 364 VCTWSPDSRYILTATTSPRLRVDNGIKLWHV 394


>gi|298707101|emb|CBJ29893.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 614

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 80/283 (28%), Gaps = 45/283 (15%)

Query: 83  SQDSFKQKITNPDSIPRFQ-DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
           SQD   Q        P F   WN  G   L++G   K           +WDV        
Sbjct: 359 SQDGALQHTLEAHEGPIFSLKWNDKG-NFLLSGSSDKSA--------IVWDVARG----- 404

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
                    +R          +++ T +  D+   + F + S    I    +        
Sbjct: 405 ----DVQQQFRF---------HEAPTLDV-DWKDDLTFATCSTDKAIHTCVIGE-----E 445

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
             R         +   ++ P+   +A  + D        +           +      I 
Sbjct: 446 YPRQTFTGHCDEVNAIKWDPSGTFLASCSDD----YTAKIWKMGQTSCVHNLEEHDKEIY 501

Query: 262 APRFS--SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             ++S     K  L S   D  + ++ V         L        S ++SP    +V  
Sbjct: 502 TIKWSPRPEKKLLLASASFDATVKLWDV-HAGKVVSTLQRHQDPVYSVAFSPSGDYLVSG 560

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           S       LY+         + S   E   F+  W+ + D IA
Sbjct: 561 SFAG---HLYIWSVKDGTLVK-SYQGEGDIFEVAWNFREDRIA 599



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 34/262 (12%), Positives = 82/262 (31%), Gaps = 23/262 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G       +  +DGA +++   + +  +F  +++     +   + D   I    + D  
Sbjct: 348 TGSYDGVARIWSQDGA-LQHTLEAHEGPIFSLKWNDKGNFLLSGSSDKSAI----VWDVA 402

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFIN 304
                ++     +  L   +  +      +    D+A+    +  +     +        
Sbjct: 403 RGDVQQQFRFHEAPTLDVDWKDD---LTFATCSTDKAIHTCVIGEEY--PRQTFTGHCDE 457

Query: 305 ISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLI 361
           ++A  + P  + +   SD +   +++ M            DKE   +   WSP+    L+
Sbjct: 458 VNAIKWDPSGTFLASCSD-DYTAKIWKMGQTSCVHNLEEHDKE--IYTIKWSPRPEKKLL 514

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +        +  +        L      + +  +SPSG  L+      G     LY  
Sbjct: 515 LASASFDATVKLWDVHAGKVVSTLQRHQDPVYSVAFSPSGDYLV-----SGSFAGHLYIW 569

Query: 422 DL-NGRNETLINTPAYASDPQW 442
            + +G             +  W
Sbjct: 570 SVKDGTLVKSYQGEGDIFEVAW 591


>gi|238880050|gb|EEQ43688.1| hypothetical protein CAWG_01933 [Candida albicans WO-1]
          Length = 384

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/246 (13%), Positives = 69/246 (28%), Gaps = 41/246 (16%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    D+ +     SP+  K+   + D      V+       +    +          R+
Sbjct: 54  VLKDHDKTVTSVDISPDGSKILTCSQD--RNALVWEYANGEYKPTLVLLRINRAATVCRW 111

Query: 266 SSNGKR---------ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY------S 310
           S +G +           +   ++E     S  L+      +T    I+   +       S
Sbjct: 112 SPDGSKFAVGSSDRIIAVCYYEEENDWWVSKHLKKPLKSTITT---IDWHPNGVLLACGS 168

Query: 311 PDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVW------SPQGDLI 361
            D    VF    +G   K    V    G+     +   + +     W      SP G+ +
Sbjct: 169 TDGHVRVFSGYIKGIDAKPDPSVW---GTKLPFQTLCGDYTNETNAWIHGVKFSPDGNAL 225

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKL 418
           A+         +     +G   R +        P      +S+++   +    G     L
Sbjct: 226 AYVSHDSSVGFVYPQ-GEGLPSRAIFNVKTDNLPF-----KSVVWLNNQQVCAGGFTCNL 279

Query: 419 YSIDLN 424
                +
Sbjct: 280 VVFQGD 285


>gi|238538022|pdb|3HFQ|A Chain A, Crystal Structure Of The Lp_2219 Protein From
           Lactobacillus Plantarum. Northeast Structural Genomics
           Consortium Target Lpr118.
 gi|238538023|pdb|3HFQ|B Chain B, Crystal Structure Of The Lp_2219 Protein From
           Lactobacillus Plantarum. Northeast Structural Genomics
           Consortium Target Lpr118
          Length = 347

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 72/208 (34%), Gaps = 31/208 (14%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           ++DG++I Y   + D             ++A      + +    + D         +   
Sbjct: 137 EQDGSHIHYTDLTPD------------NRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTXE 184

Query: 257 RSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERL-------TNTLFINIS 306
                 PR   FS +G+ A ++ +    +     D Q+ A  +L        +    N +
Sbjct: 185 AG--FGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGA 242

Query: 307 ASY--SPDSSQIVFESDREGKE-QLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLI 361
           A+   S D    ++ S+R      ++ + ++G  +  ++IS + +    D    P    +
Sbjct: 243 AAIRLSHDG-HFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGD-FPRDFDLDPTEAFV 300

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVED 389
                + +   +        +  LL +D
Sbjct: 301 VVVNQNTDNATLYARDLTSGKLSLLQKD 328


>gi|169603802|ref|XP_001795322.1| hypothetical protein SNOG_04909 [Phaeosphaeria nodorum SN15]
 gi|111066180|gb|EAT87300.1| hypothetical protein SNOG_04909 [Phaeosphaeria nodorum SN15]
          Length = 557

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 46/270 (17%), Positives = 87/270 (32%), Gaps = 31/270 (11%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G     + V D D     +        +     SP+ Q VA  ++D    +R+Y  DT
Sbjct: 251 RDGDKLPHVVVYDVDAGKEVHRLYGHTDAIMWSAMSPDHQLVASVSWD--GTMRMYSTDT 308

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FI 303
              +      +  S   A  F+ + K  + S +    + ++ V         L       
Sbjct: 309 GYLQWVTE--DSGSQSWAGAFTPDSKHVIWSSKSGRTIKVHDVS-DGREVCALAEEPDDW 365

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD---------KEASYFDPVW 354
               +++    ++ F     G++  YV     S    I Q          + +S     W
Sbjct: 366 CRHFAWNTTGDKVAFA----GRKHAYVWCPFDSPHGTIDQHFVLEEDKDWRLSSISSIGW 421

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
              G+++A     G K    +     + + L V+   +    W   G   ++     G  
Sbjct: 422 MKDGEILALEFSDGTKL---IYNTQTNSKELFVKPQGMNT-AWVDQG---LYGILGGGPE 474

Query: 415 GSKLY-SIDLNGRNET-LINTPAYASDPQW 442
               Y ++D +G+      + PA    P W
Sbjct: 475 HPDFYLTVDGDGKVRYCPTSVPAG---PSW 501


>gi|302521732|ref|ZP_07274074.1| peptidase [Streptomyces sp. SPB78]
 gi|302430627|gb|EFL02443.1| peptidase [Streptomyces sp. SPB78]
          Length = 712

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 51/167 (30%), Gaps = 36/167 (21%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQ---LYVMQS--NGSDQKRISQDKEASYFDPV- 353
           TL    S + +PD S+IVF   R G ++   L+V+    +G   +R+  D  A       
Sbjct: 19  TLGAPRSLTVAPDGSRIVFLRSRSGTDRSQMLWVLDVTEDGKSAERLLADPAALLGAGGE 78

Query: 354 ----------------------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                                 ++   +    T        +          R L     
Sbjct: 79  RLSARERARRERARESAAGIVGYASDAE--VSTAVYALSGRLWTTDLRSGASRALAVPGP 136

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           +  P  SP G  + +  +        L  +D +G  +  +  P  A 
Sbjct: 137 VIDPRPSPDGSMIAYVSE------GALRLVDADGNGDRALAAPEEAQ 177



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/217 (12%), Positives = 68/217 (31%), Gaps = 42/217 (19%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------- 264
             + +PR SP+   +AY +     ++       R   AP+       +            
Sbjct: 135 GPVIDPRPSPDGSMIAYVSEGALRLVDADGNGDRALAAPEEAQVTYGLAEFVAAEEMDRT 194

Query: 265 ----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               ++ +  R L++   +  +  +           + +    +   S            
Sbjct: 195 RGFWWAPDSARLLVARVDESPVQRWW----------IADPAHPDREPS--------AVAY 236

Query: 321 DREGKE----QLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGV 375
            R G      +L++    G   + +       Y   V WS  G  +   +   ++  + +
Sbjct: 237 PRAGTANADVRLFLHDLEGGRTEVVWDRVRYPYLARVHWSAAGAPLLLVQSRDQRAVLYL 296

Query: 376 -MKKDGSQERLLVEDSNLQ-------APTWSPSGRSL 404
            + ++    R++  D +         +P W+P G+ +
Sbjct: 297 GVDEESGATRMVHADEDPDWVELRGGSPAWTPDGKLV 333


>gi|302844524|ref|XP_002953802.1| hypothetical protein VOLCADRAFT_64079 [Volvox carteri f.
           nagariensis]
 gi|300260910|gb|EFJ45126.1| hypothetical protein VOLCADRAFT_64079 [Volvox carteri f.
           nagariensis]
          Length = 328

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 57/153 (37%), Gaps = 13/153 (8%)

Query: 182 ESVVSGIIKNSLCVM-DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    +LC+                 Q++ +  FSP+ + +  A++D      V 
Sbjct: 185 ERLVSGSDDFTLCLYEPSTSKTPIARMTGHVQLINQVVFSPDGRYILSASFDK----SVK 240

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTN 299
           L D                +    +S++  R  +S  KD  + ++  DL++   +  L  
Sbjct: 241 LWDGARGGFLATFRGHVGPVYQVAWSAD-SRMFVSGSKDSTLKVW--DLRTRKLKVDLPG 297

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
                 +  +SPD   +       GK+++  + 
Sbjct: 298 HSDEVFTVDWSPDGGSVA----SGGKDRVLKLW 326



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 36/111 (32%), Gaps = 5/111 (4%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+     +I    FS +G+  L S   D+++ ++    +          +      ++S 
Sbjct: 210 RMTGHVQLINQVVFSPDGRYIL-SASFDKSVKLWD-GARGGFLATFRGHVGPVYQVAWSA 267

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           DS   V  S       L V        K          F   WSP G  +A
Sbjct: 268 DSRMFVSGSK---DSTLKVWDLRTRKLKVDLPGHSDEVFTVDWSPDGGSVA 315



 Score = 40.0 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 46/150 (30%), Gaps = 11/150 (7%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  + +Y          R+T  + +     +SPD   I+  S     + + +  
Sbjct: 187 LVSGSDDFTLCLYEPSTSKTPIARMTGHVQLINQVVFSPDGRYILSASF---DKSVKLWD 243

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +      +   WS    +            + V      + ++ +   + 
Sbjct: 244 GARGGFLATFRGHVGPVYQVAWSADSRMFVSGSKDST---LKVWDLRTRKLKVDLPGHSD 300

Query: 393 QAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
           +  T  WSP G S+        D   KL+ 
Sbjct: 301 EVFTVDWSPDGGSVA---SGGKDRVLKLWR 327


>gi|291544204|emb|CBL17313.1| hypothetical protein RUM_11690 [Ruminococcus sp. 18P13]
          Length = 383

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 36/102 (35%), Gaps = 12/102 (11%)

Query: 269 GKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------SD 321
           G++  + +      + +  +DL+ N    +T+        S+SPD S+I+        SD
Sbjct: 122 GQQLAMCIGSDPMMLHLSILDLEDNEETDITDGDTTECHPSWSPDGSRILCSSAGYARSD 181

Query: 322 RE-----GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  G  ++            +  +    Y  P  +P G
Sbjct: 182 SGGIVKLGPYEILAYAPAAGSLDTLCSNPAYDYLVPREAPDG 223



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 38/100 (38%), Gaps = 2/100 (2%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TKFSGE 369
           PD + +++  + +    LY    + + +         +        +G  +A        
Sbjct: 75  PDPAGMLYAVELDEVGGLYRRDLDPAAKAEGHVLTRQNLHFGGMDRRGQQLAMCIGSDPM 134

Query: 370 KFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSR 408
              + ++  + ++E  + + D+    P+WSP G  ++ S 
Sbjct: 135 MLHLSILDLEDNEETDITDGDTTECHPSWSPDGSRILCSS 174



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 66/217 (30%), Gaps = 18/217 (8%)

Query: 77  DVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD- 135
                +S   ++  +    SI   + W + G   + TG V     D  R+   L  +   
Sbjct: 17  GKTTALSSIRYQNYLATMQSIHDAKSWKTSGTGAMFTGAVDNAPVDPARIHMGLHGLVPD 76

Query: 136 -RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS---RILFVSESVVSGIIKN 191
               +   +       +R+     +      +T +   F     R   ++  + S  +  
Sbjct: 77  PAGMLYAVELDEVGGLYRRDLDPAAKAEGHVLTRQNLHFGGMDRRGQQLAMCIGSDPMML 136

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-----YATYDDE-----DILRVYL 241
            L ++D +  N        D     P +SP+  ++      YA  D           +  
Sbjct: 137 HLSILDLE-DNEETDITDGDTTECHPSWSPDGSRILCSSAGYARSDSGGIVKLGPYEILA 195

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
                        N     L PR + +G  AL  +++
Sbjct: 196 YAPAAGSLDTLCSNPAYDYLVPREAPDG--ALYCIRQ 230


>gi|240274446|gb|EER37962.1| WD40 domain-containing protein [Ajellomyces capsulatus H143]
 gi|325090787|gb|EGC44097.1| WD40 repeat-containing protein [Ajellomyces capsulatus H88]
          Length = 552

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 67/215 (31%), Gaps = 12/215 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R+  P    I     FSP+ Q++ YA+ +   +  ++  +   +       NF  +  A
Sbjct: 59  LRWSKPPGPSIAEPDAFSPDSQRILYASGNYISVWDLHDENWCAEIEAGDTFNFTYVDFA 118

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESD 321
                  +    S   +  + +    L +     + +  F N +   + P +  +     
Sbjct: 119 ATHD---EVVAFS---EFNVHLTIFSLSTGGQRVIKSPKFSNATGYGFRPATGHLALLLK 172

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +  + L + +    +                WSP G  +     +     + +   DG 
Sbjct: 173 LDANDTLTIHEPETYEAITTVTLNTVDAQGLKWSPNGAWLGVWDSASTMPRVEIYTADGQ 232

Query: 382 QERLLVEDSNLQA-----PTWSPSGRSLIFSRKKD 411
             R   E +N          WSP  + L   R   
Sbjct: 233 YYRTYSEAANDSNLGVKTIEWSPDSQLLAIGRHDG 267


>gi|260944230|ref|XP_002616413.1| hypothetical protein CLUG_03654 [Clavispora lusitaniae ATCC 42720]
 gi|238850062|gb|EEQ39526.1| hypothetical protein CLUG_03654 [Clavispora lusitaniae ATCC 42720]
          Length = 923

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 66/173 (38%), Gaps = 11/173 (6%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A+ +     +L VY   +      K+ G+F +M  A  +S +G R +++   D  +
Sbjct: 318 GEWLAFGSSKLGQLL-VYEWKSE-SYILKQQGHFDAMN-ALCYSPDGSR-VVTASDDGKL 373

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++ ++         T       + +++    Q++F +  +G  + + +     + +  +
Sbjct: 374 KVWDIN-SGFCLTTFTEHTGAVSAVAFAKKG-QVMFSASMDGTVRAWDL-IRFRNFRTFT 430

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
             +   +      P G+++        +F I V         LL   +  + P
Sbjct: 431 APERVQFSSLAVDPSGEVVVAGSQD--EFEIYVWSVQTGS--LLDSLAGHEGP 479


>gi|224031501|gb|ACN34826.1| unknown [Zea mays]
          Length = 716

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/217 (13%), Positives = 74/217 (34%), Gaps = 11/217 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + +   D  N +        ++ + RFSP+  ++A +++D    +RV+  D  
Sbjct: 448 TGGHDKKVTLWCTDSLNPKSYLEEHSFLITDVRFSPSMSRLATSSFD--KTVRVWDAD-N 504

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
            D + +      + +++  F  N +  + S   D  +  +S++   +    +        
Sbjct: 505 TDYSLRTFTGHSATVMSLDFHPNKEDMICSCDSDGEVRSWSIN-NGSCLTCVKVFKGGAT 563

Query: 306 SASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAF 363
              + P     +   SD+     +Y++        +   Q    +     W   G+ +A 
Sbjct: 564 QMRFQPRKGKYLAAASDKA----IYILDGETQHACRSPLQGHNKNIQSLCWDSAGEYLAS 619

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSP 399
                 +       ++G     L    N   +  + P
Sbjct: 620 VSEDSVRIWSFSSGREGEFVHELNRSGNQFHSCVFHP 656


>gi|195383696|ref|XP_002050562.1| GJ22219 [Drosophila virilis]
 gi|194145359|gb|EDW61755.1| GJ22219 [Drosophila virilis]
          Length = 797

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 58/185 (31%), Gaps = 38/185 (20%)

Query: 221 PNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           P+ Q +A      + +  ++ L +T   +  +++   +  +   RFS + +  L SV +D
Sbjct: 568 PDGQMLASTCRASNAEHAQIILWNTTNWKQLQKLPGHQLTVTQLRFSPDARYLL-SVSRD 626

Query: 280 EAMDIYS----------------VDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
               +Y                  D  +    R+        S  +S D       S R+
Sbjct: 627 RRWSLYEREQPEEPLSSYALVANTDKTNGVHTRII------WSCDWSHDGKYFA-TSSRD 679

Query: 324 GKEQLYVM--------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           GK   +            NG       + K  S     ++P      +       + + +
Sbjct: 680 GKVVAWTRAEQREATGSLNGWQAAGTLELKNESITAVSFAPH-----YLNGQNGVYVLAL 734

Query: 376 MKKDG 380
             + G
Sbjct: 735 GTESG 739


>gi|145207304|gb|AAH31227.2| WDR88 protein [Homo sapiens]
          Length = 452

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 94/268 (35%), Gaps = 32/268 (11%)

Query: 186 SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG    ++ + D  DG+ +R         + E   + +  +V  A+YD      V   D 
Sbjct: 145 SGSYDCTVKLWDPVDGSVVRDFEHRPKAPVVECSITGDSSRVIAASYDK----TVRAWDL 200

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTL 301
              +   ++  + + I++ +FS +GK  +     D    I  +D ++  T  +    +T 
Sbjct: 201 ETGKLLWKV-RYDTFIVSCKFSPDGKYVVSGFDVDHG--ICIMDAENITTVSVIKDHHTR 257

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGD 359
            I  S  + PDS ++   S DR     + +           I++    +  +  ++  G 
Sbjct: 258 SI-TSCCFDPDSQRVASVSLDR----CIKIWDVTSQATLLTITKAHSNAISNCCFTFSGH 312

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQER-----LLVEDSNLQAPT---WSPSGRSLIFSRKKD 411
            +  + +      + +      + R     + +   +  + +   ++     LI      
Sbjct: 313 FLCTSSWDK---NLKIWNVHTGEFRNCGACVTLMQGHEGSVSSCHFARDSSFLI---SGG 366

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASD 439
            D    ++ +    R  +L     +  D
Sbjct: 367 FDRTVAIWDVAEGYRKLSLKGHNDWVMD 394


>gi|115402881|ref|XP_001217517.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114189363|gb|EAU31063.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 657

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/231 (16%), Positives = 80/231 (34%), Gaps = 34/231 (14%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++  S   + +L ++   G     +   ++  + +  +SPN ++             +
Sbjct: 245 VDKTGKSYYGETTLYLLSITGGFDSRVDLDKEGPIHDVTWSPNSKEFGVVYGYMPAKTTI 304

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     +  LAPR    FS +G+  L++   + A  +   DL+     
Sbjct: 305 FNF---------RGVPQHNFALAPRNTILFSPHGRFVLVAGFGNLAGQMDIYDLE-KNYH 354

Query: 296 RLTNTLFINIS-ASYSPDSSQI--VFESDREG-KEQLYVMQSNGS--------------- 336
           ++T     N S  ++SPD   I     S R      + +   +G+               
Sbjct: 355 KVTTVEASNASVCAWSPDGQFILTATTSPRLRVDNGIRIWHVSGALMYNEDMHELYDVFW 414

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGSQERLL 386
             +  +Q      F+P+ +P    +A+           G  +  G++ +L 
Sbjct: 415 RPQSTTQHPLTDPFNPLPTPHPSAVAYLSTRKAPVKPAGAYRPPGARGQLT 465



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 28/213 (13%), Positives = 69/213 (32%), Gaps = 23/213 (10%)

Query: 227 AYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD------ 279
            +          V L M  +      +   F+   +  +++++G   ++  Q +      
Sbjct: 191 VFVPERKGQPAAVKLFMVPQFGAPVSQKTFFKGDKVQLKWNASGTTCIVLAQTEVDKTGK 250

Query: 280 ---EAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQS 333
                  +Y + +      R+  +        ++SP+S +   V+     G         
Sbjct: 251 SYYGETTLYLLSITGGFDSRVDLDKEGPIHDVTWSPNSKEFGVVY-----GYMPAKTTIF 305

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNL 392
           N     +      A     ++SP G  +    F      + +   + +  ++   E SN 
Sbjct: 306 NFRGVPQ-HNFALAPRNTILFSPHGRFVLVAGFGNLAGQMDIYDLEKNYHKVTTVEASNA 364

Query: 393 QAPTWSPSGRSLIFSRKKDG---DTGSKLYSID 422
               WSP G+ ++ +        D G +++ + 
Sbjct: 365 SVCAWSPDGQFILTATTSPRLRVDNGIRIWHVS 397


>gi|102470001|ref|NP_775750.3| WD repeat-containing protein 88 [Homo sapiens]
 gi|296453028|sp|Q6ZMY6|WDR88_HUMAN RecName: Full=WD repeat-containing protein 88; AltName: Full=PQQ
           repeat and WD repeat-containing protein
 gi|151555513|gb|AAI48667.1| WD repeat domain 88 [synthetic construct]
 gi|261857936|dbj|BAI45490.1| WD repeat domain 88 [synthetic construct]
          Length = 472

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 94/268 (35%), Gaps = 32/268 (11%)

Query: 186 SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG    ++ + D  DG+ +R         + E   + +  +V  A+YD      V   D 
Sbjct: 119 SGSYDCTVKLWDPVDGSVVRDFEHRPKAPVVECSITGDSSRVIAASYDK----TVRAWDL 174

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTL 301
              +   ++  + + I++ +FS +GK  +     D    I  +D ++  T  +    +T 
Sbjct: 175 ETGKLLWKV-RYDTFIVSCKFSPDGKYVVSGFDVDHG--ICIMDAENITTVSVIKDHHTR 231

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGD 359
            I  S  + PDS ++   S DR     + +           I++    +  +  ++  G 
Sbjct: 232 SI-TSCCFDPDSQRVASVSLDR----CIKIWDVTSQATLLTITKAHSNAISNCCFTFSGH 286

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQER-----LLVEDSNLQAPT---WSPSGRSLIFSRKKD 411
            +  + +      + +      + R     + +   +  + +   ++     LI      
Sbjct: 287 FLCTSSWDK---NLKIWNVHTGEFRNCGACVTLMQGHEGSVSSCHFARDSSFLI---SGG 340

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASD 439
            D    ++ +    R  +L     +  D
Sbjct: 341 FDRTVAIWDVAEGYRKLSLKGHNDWVMD 368


>gi|47077403|dbj|BAD18589.1| unnamed protein product [Homo sapiens]
          Length = 472

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 94/268 (35%), Gaps = 32/268 (11%)

Query: 186 SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG    ++ + D  DG+ +R         + E   + +  +V  A+YD      V   D 
Sbjct: 119 SGSYDCTVKLWDPVDGSVVRDFEHRPKAPVVECSITGDSSRVIAASYDK----TVRAWDL 174

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTL 301
              +   ++  + + I++ +FS +GK  +     D    I  +D ++  T  +    +T 
Sbjct: 175 ETGKLLWKV-RYDTFIVSCKFSPDGKYVVSGFDVDHG--ICIMDAENITTVSVIKDHHTR 231

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGD 359
            I  S  + PDS ++   S DR     + +           I++    +  +  ++  G 
Sbjct: 232 SI-TSCCFDPDSQRVASVSLDR----CIKIWDVTSQATLLTITKAHSNAISNCCFTFSGH 286

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQER-----LLVEDSNLQAPT---WSPSGRSLIFSRKKD 411
            +  + +      + +      + R     + +   +  + +   ++     LI      
Sbjct: 287 FLCTSSWDK---NLKIWNVHTGEFRNRGACVTLMQGHEGSVSSCHFARDSSFLI---SGG 340

Query: 412 GDTGSKLYSIDLNGRNETLINTPAYASD 439
            D    ++ +    R  +L     +  D
Sbjct: 341 FDRTVAIWDVAEGYRKLSLKGHNDWVMD 368


>gi|320161558|ref|YP_004174782.1| hypothetical protein ANT_21560 [Anaerolinea thermophila UNI-1]
 gi|319995411|dbj|BAJ64182.1| hypothetical protein ANT_21560 [Anaerolinea thermophila UNI-1]
          Length = 687

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 12/170 (7%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +   +    R   R G  R +   P R +++GK  ++               ++   E +
Sbjct: 93  ITAENVHRLREIARYGYPRLLDETPYRLTADGKTIVVGTTAGIEFYDALTQAKNGGFE-V 151

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--ISQDKEASYFDPVWS 355
                 ++    SPD     F   R G + L V + +G   +   +      +      S
Sbjct: 152 EFLRAFDM----SPDGR---FILTRAG-DTLTVWRQDGQKVREFALEAGDAWALNAVALS 203

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           P G L+A  +  G+      +     ++  LV+        +SP G+ L 
Sbjct: 204 PDGSLLAVQRPRGQVVEPDRVDVYRVEDGSLVDTVRGMGAQFSPDGKYLA 253



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 19/155 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +   +      D L V+  D +  R           + A   S +G    +   + 
Sbjct: 160 SPDGR---FILTRAGDTLTVWRQDGQKVREFALEAGDAWALNAVALSPDGSLLAVQRPRG 216

Query: 280 EAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + ++   VD+      R+ +   ++      A +SPD   +    D     +LY +   G
Sbjct: 217 QVVEPDRVDV-----YRVEDGSLVDTVRGMGAQFSPDGKYLATVFDAS--VRLYPVAELG 269

Query: 336 SD-QKRISQDK----EASYFDPVWSPQGDLIAFTK 365
           +  +KR+  +            V+S  G L A  +
Sbjct: 270 TGWEKRLPGETLPWCGEDTCGLVFSTDGTLAAVVR 304


>gi|297624065|ref|YP_003705499.1| Oligogalacturonide lyase [Truepera radiovictrix DSM 17093]
 gi|297165245|gb|ADI14956.1| Oligogalacturonide lyase [Truepera radiovictrix DSM 17093]
          Length = 390

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 39/135 (28%), Gaps = 14/135 (10%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLF-----INISASYSPDSSQIVFESDREGKEQLYVMQS 333
           ++    Y          +LT               ++ D    +F SDREG+  L+    
Sbjct: 8   NDEPFRYRDPHSGREVTQLTRYKGHSNHLYFTDPCWTGD-RSFIFTSDREGRSNLFHYDL 66

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                 +++    AS     +S          + G+   +  ++      R L       
Sbjct: 67  AEHRITQLTDLDLASRPGGCYSQANR----AHYFGDAERLYELELRTLGLRELFRAPRDF 122

Query: 394 A--PTWSP--SGRSL 404
                ++P   G  +
Sbjct: 123 VLGERFAPTADGAYV 137


>gi|239626895|ref|ZP_04669926.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517041|gb|EEQ56907.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 387

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 53/141 (37%), Gaps = 14/141 (9%)

Query: 281 AMDIYSVDLQSNATERLT----NTLFINISASYSPDSSQIVFESDR---EGKEQLYVMQS 333
            +  Y+        ++LT    N        S+  DS+ + F SDR    G   L+ M+ 
Sbjct: 9   EIKEYTDPKSGLRIKQLTDRHVNFHMYFTDNSFDGDSNSLYFFSDRCNGRGIYNLFHMEL 68

Query: 334 NGSDQKRISQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +     +++ + E  +      +     + +       + + VM       +++ ED ++
Sbjct: 69  DTGVMTQVTDEPEGVWLSTATKTRDSRYLVYWS----GYRLKVMDTREKTVKVVYEDHDM 124

Query: 393 --QAPTWSPSGRSLIFSRKKD 411
             Q  + S   + + F R +D
Sbjct: 125 LVQNFSVSSDRKRIGFIRNED 145



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 68/216 (31%), Gaps = 43/216 (19%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNATERLTN 299
             RI +   R  NF        F  +         +       +++ ++L +    ++T+
Sbjct: 19  GLRIKQLTDRHVNFHMYFTDNSFDGDSNSLYFFSDRCNGRGIYNLFHMELDTGVMTQVTD 78

Query: 300 TLFINISASY------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                    +      + DS  +V+ S      +L VM +     K + +D +    +  
Sbjct: 79  EP----EGVWLSTATKTRDSRYLVYWS----GYRLKVMDTREKTVKVVYEDHDMLVQNFS 130

Query: 354 WSPQGDLIAFTKFSG---------------------EKFAIGVMKKDGSQER-LLVEDSN 391
            S     I F +                        +   I V+  DG+    +  + + 
Sbjct: 131 VSSDRKRIGFIRNEDVGARQDGGPNYSGFKDKMYAIKDSRISVVNMDGTGFHDVWRDTNW 190

Query: 392 LQAPTWSPSGRSLIFSRKKDGDT---GSKLYSIDLN 424
           L    +SP   S+      +G       +++ I+++
Sbjct: 191 LSHFQFSPDNPSIA-MFCHEGPWNCVNQRIWLINMD 225



 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 43/286 (15%), Positives = 88/286 (30%), Gaps = 62/286 (21%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD----------------- 233
             L VMD     ++ +    D ++     S +++++ +   +D                 
Sbjct: 103 YRLKVMDTREKTVKVVYEDHDMLVQNFSVSSDRKRIGFIRNEDVGARQDGGPNYSGFKDK 162

Query: 234 -----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----AMDI 284
                +  + V  MD        R  N+ S     +FS +     +   +         I
Sbjct: 163 MYAIKDSRISVVNMDGTGFHDVWRDTNWLSHF---QFSPDNPSIAMFCHEGPWNCVNQRI 219

Query: 285 YSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVF-----------ESDR--------E 323
           + +++ +            +      ++ D   IVF            SDR         
Sbjct: 220 WLINMDNGDVWPCFRQGEDDCVGHEFWTRDG-MIVFDNRGAGHDGTISSDRTQVFTPPSS 278

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-Q 382
           G  Q Y   ++ + Q + +          + +P  D   F     +   +  M  DG   
Sbjct: 279 GGRQPYFGIADKTGQVQRTVPMPFYCNHYMANPVKDE--FVGDGTDDIVLIRMGIDGKPT 336

Query: 383 ERLLVE-------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            R+L           +   PT+S  GR ++++   D +    L+ I
Sbjct: 337 LRVLANHNTTWLYQHSHCHPTFSWDGRKILYAADTD-EGHCNLFLI 381


>gi|145606002|ref|XP_370245.2| hypothetical protein MGG_06742 [Magnaporthe oryzae 70-15]
 gi|145013738|gb|EDJ98379.1| hypothetical protein MGG_06742 [Magnaporthe oryzae 70-15]
          Length = 745

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 73/245 (29%), Gaps = 23/245 (9%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G + + + V   DG  ++   P    I        N +K+   +     +     +    
Sbjct: 364 GTMDSYIRVWSLDGKPLKSKVPQEQDIHV------NNRKLVGHSGPVYGVSFSDSIANTD 417

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                   N  ++   P       + L+S   D  + ++S+D+ S             + 
Sbjct: 418 HNLFGDESNSNNIDTDP-------KLLLSCSADGQVRLWSLDVWS-CLAVYKAHHGPVLR 469

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
             + P              + + V   + +  +RI    + S     W P G  + F+  
Sbjct: 470 VLWGPHGHYFA---TAGWDKTVRVFMQDHASAQRIMVGHDTSISALAWHPNGTYV-FSAS 525

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +  +I +          +         T   +P+GR L  S    G+     + I   
Sbjct: 526 DEQDKSIRMWSVQTGNCVRVFTGHTEYISTLEVAPNGRILA-SADIGGNIIF--WDISKG 582

Query: 425 GRNET 429
            R + 
Sbjct: 583 KRIKR 587



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 62/169 (36%), Gaps = 8/169 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     ++ V  +D A+ + +    D  +    + PN   V  A+ + +  +R  +   +
Sbjct: 481 TAGWDKTVRVFMQDHASAQRIMVGHDTSISALAWHPNGTYVFSASDEQDKSIR--MWSVQ 538

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                +        I     + NG R L S      +  + +  +    +R   +     
Sbjct: 539 TGNCVRVFTGHTEYISTLEVAPNG-RILASADIGGNIIFWDIS-KGKRIKRCRGHGKGGI 596

Query: 305 ISASYSPDSSQIVFESDREGKEQLY--VMQSNGSDQKRISQDKEASYFD 351
            S S+S +S+ +V     +G  +L+   + ++GS    ++    A+   
Sbjct: 597 PSLSFSVESNVLV-SGGLDGTVRLWDVELPADGSKANAVAGPSAAAIGG 644


>gi|111224861|ref|YP_715655.1| hypothetical protein FRAAL5496 [Frankia alni ACN14a]
 gi|111152393|emb|CAJ64129.1| conserved hypothetical protein; putative membrane protein [Frankia
           alni ACN14a]
          Length = 955

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 81/230 (35%), Gaps = 28/230 (12%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
            DRLRV FRL        I G    +  A   +I    +  +  +   +   F++R L +
Sbjct: 728 DDRLRVLFRL-------PIAGLASRTRVAPNGRIGAVTTFVVGDAYNTDS--FSTRTLLL 778

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             +    +       + R G  +  +    D+ L+   F+ +     YAT    D   + 
Sbjct: 779 DLTAGRILADLEDFAVTRAGRRLHAI----DENLWGVTFAADSDT-FYATLHTGDHFYL- 832

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ-----KDEAMDIYSVDLQSNATE 295
               R     +R    R  +  P  S +  R     +           ++ +DL + A  
Sbjct: 833 ---IRGHVHDRRAEVLRDGVECPSLSPDEHRVAYKSRLSHGFAPATWRLHVLDLATGADR 889

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQL----YVMQSNGSDQKRI 341
            L  T  ++  A+++ D   + +     G        +++ ++G+   R+
Sbjct: 890 PLAETRNVDDQAAWT-DGDHVSYAVANAGPGAPLADTWIVPADGTGHPRL 938



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 30/96 (31%), Gaps = 9/96 (9%)

Query: 351 DPVWSPQGDLIAFTKFSGEKF-----AIGVMKKDGSQERLLVEDSN-LQAPTWSPSGRSL 404
            P  SP    +A+       F      + V+      +R L E  N      W+  G  +
Sbjct: 851 CPSLSPDEHRVAYKSRLSHGFAPATWRLHVLDLATGADRPLAETRNVDDQAAWT-DGDHV 909

Query: 405 IFSRKKDGDTGS--KLYSIDLNGRNETLINTPAYAS 438
            ++    G        + +  +G     +  PA  S
Sbjct: 910 SYAVANAGPGAPLADTWIVPADGTGHPRLLVPAAQS 945


>gi|62089078|dbj|BAD92983.1| WD repeat-containing protein 1 isoform 1 variant [Homo sapiens]
          Length = 624

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/268 (14%), Positives = 85/268 (31%), Gaps = 40/268 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 27  FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTE----HAHQVVVA 82

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           +    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 83  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGR 142

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---------GANIRYL 206
                          G+       ++   +       L     D             ++ 
Sbjct: 143 EKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFT 202

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
                + +   RFSP+  + A A+ D     ++Y+ D +       +G  +     I A 
Sbjct: 203 VGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAI 258

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +S +    L S   D+   I+ V + S
Sbjct: 259 SWSPDSTHLL-SASGDKTSKIWDVSVNS 285


>gi|240273953|gb|EER37472.1| eukaryotic translation initiation factor 2A [Ajellomyces capsulatus
           H143]
 gi|325094611|gb|EGC47921.1| eukaryotic translation initiation factor 2A [Ajellomyces capsulatus
           H88]
          Length = 732

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 69/189 (36%), Gaps = 19/189 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           V ++  S   + +L ++  + G + R +   ++  + +  +SPN ++          ++ 
Sbjct: 247 VDKTGKSYYGETTLYLLSANSGFDSR-IDLDKEGPIHDVTWSPNSKEF--------GVVY 297

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            Y+         + +    S  LAPR    FS NG+  +++   + A  +   DL  + T
Sbjct: 298 GYMPAKTTIFNNRAVATH-SFALAPRNTILFSPNGRFVIVAGFGNLAGQLDIYDLDRDYT 356

Query: 295 ERLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           +  T          +SPD   I     S R   +    +   G     +  +     +  
Sbjct: 357 KVATIEASNASVCEWSPDGKFILTATTSPRLRVDNGVRIWHVGGGL--MYNEDLTELYQV 414

Query: 353 VWSPQGDLI 361
            W PQ   +
Sbjct: 415 CWRPQSTTV 423



 Score = 43.9 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 75/222 (33%), Gaps = 23/222 (10%)

Query: 218 RFSP-NQQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALI 274
             SP +   +A +          V + +      P    NF +   +  ++++ G   ++
Sbjct: 182 ALSPGDSNSIAVFIPERKGLPASVRIFNVPQFNTPVSQKNFFKGDKVQLKWNNTGTTLIV 241

Query: 275 SVQKD---------EAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQI-VFESDRE 323
             Q D             +Y +   S    R+  +        ++SP+S +  V      
Sbjct: 242 LAQTDVDKTGKSYYGETTLYLLSANSGFDSRIDLDKEGPIHDVTWSPNSKEFGVVYGYMP 301

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            K  ++  ++  +    +     A     ++SP G  +    F      + +   D    
Sbjct: 302 AKTTIFNNRAVATHSFAL-----APRNTILFSPNGRFVIVAGFGNLAGQLDIYDLDRDYT 356

Query: 384 RLLV-EDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
           ++   E SN     WSP G+ ++ +        D G +++ +
Sbjct: 357 KVATIEASNASVCEWSPDGKFILTATTSPRLRVDNGVRIWHV 398



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 17/128 (13%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-- 381
           G+  LY++ +N     RI  DKE    D  WSP                 G M    +  
Sbjct: 256 GETTLYLLSANSGFDSRIDLDKEGPIHDVTWSPNSKEFGVV--------YGYMPAKTTIF 307

Query: 382 QERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAY 436
             R +   S   AP     +SP+GR +I +   +      +Y +D +  +  T+  + A 
Sbjct: 308 NNRAVATHSFALAPRNTILFSPNGRFVIVAGFGNLAGQLDIYDLDRDYTKVATIEASNAS 367

Query: 437 ASDPQWVG 444
             +  W  
Sbjct: 368 VCE--WSP 373


>gi|226304822|ref|YP_002764780.1| hydrolase [Rhodococcus erythropolis PR4]
 gi|226183937|dbj|BAH32041.1| putative hydrolase [Rhodococcus erythropolis PR4]
          Length = 646

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 55/206 (26%), Gaps = 49/206 (23%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G I   +C +  DG+            L  PR SP+  K+A+  ++   +         
Sbjct: 147 GGAITRDICAIPLDGSGKVRSIVGGSDFLSSPRLSPSGTKIAWIAWNHPQMPW------- 199

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                                 +G    ++   D     YSV +       L        
Sbjct: 200 ----------------------DGTELRVAPLVDGVAQNYSVLIGGLEESVL-------- 229

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--- 362
              +  D  ++   SDR G   +Y +   G     I     A +  P W           
Sbjct: 230 QPEWITD-DELYAISDRSGWWNIYRV---GGKITPICPV-NADFGGPQWRFGARWFVELD 284

Query: 363 ----FTKFSGEKFAIGVMKKDGSQER 384
                T  +     + V+     + R
Sbjct: 285 NGHLLTARTVGTDTLAVLDPASGELR 310


>gi|221105548|ref|XP_002170696.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 1004

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 53/158 (33%), Gaps = 18/158 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP---------KRIGNFRSMILAPRFSSN 268
            F P+     YA   +  ILR+  M    D            KR    R  I    +S +
Sbjct: 706 AFHPDG--AFYAVGANSKILRICKMINSNDSKSTCPPAPVLIKRQKYHRGSIYCMAWSPD 763

Query: 269 GKRALISVQKDEAMDIYSVD----LQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           GK    +   D+++ ++  D     QS     L          ++ P+ + ++  S   G
Sbjct: 764 GKLLA-TGSNDKSIKLFQFDGYNCTQSGDDVELNIHNGTVRELAFVPNRAGLL-ISGGAG 821

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              + +          I      +    V++  GD+IA
Sbjct: 822 DGNINITDVLTQQVTGILSGHSGNVMT-VYAGDGDVIA 858


>gi|220903886|ref|YP_002479198.1| outer membrane protein assembly complex, YaeT protein
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
 gi|219868185|gb|ACL48520.1| outer membrane protein assembly complex, YaeT protein
           [Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774]
          Length = 920

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 51/142 (35%), Gaps = 17/142 (11%)

Query: 6   FIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE----L 61
                 N+  N+  +  L+         A        A+  P+ +     V+        
Sbjct: 1   MKKILRNILSNILCVTALVCAVQLMPREA-------GASQGPLVLVLPFQVNAGPEMPNA 53

Query: 62  GGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSL----GAQVLVTGRVI 117
              V ++++  L++S +  ++  ++ +Q   +           +L    GAQ+++ G   
Sbjct: 54  AQDVPQIIADQLKQSGM-RVVPMNTARQLQRSSGETIDLATARALGRQAGAQLVIYGSFN 112

Query: 118 KEGKDRLRVEFRLWDVKDRKQI 139
           + G     ++ RL  V+  + +
Sbjct: 113 QLGDG-FNMDTRLVPVQQGEAV 133


>gi|156121355|ref|NP_001095826.1| eukaryotic translation initiation factor 3 subunit B [Bos taurus]
 gi|223635120|sp|A7MB16|EIF3B_BOVIN RecName: Full=Eukaryotic translation initiation factor 3 subunit B;
           Short=eIF3b; AltName: Full=Eukaryotic translation
           initiation factor 3 subunit 9; AltName: Full=eIF-3-eta
 gi|154425571|gb|AAI51285.1| EIF3B protein [Bos taurus]
 gi|296473007|gb|DAA15122.1| eukaryotic translation initiation factor 3 subunit B [Bos taurus]
          Length = 786

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 261 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 312

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 313 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 358

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 359 YLVTFSPLMDTQDDPQAIIIWDILTGQKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 416

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 417 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 476

Query: 430 LI 431
            +
Sbjct: 477 RV 478



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 443 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 502

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 503 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 555

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      N    + I    +       WSPQG  +          A+  +     
Sbjct: 556 APRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 615

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 616 TVMNIAEHYMASDVEWDPTGRYVV 639


>gi|150377548|ref|YP_001314143.1| adenylyl cyclase class-3/4/guanylyl cyclase [Sinorhizobium medicae
           WSM419]
 gi|150032095|gb|ABR64210.1| adenylyl cyclase class-3/4/guanylyl cyclase [Sinorhizobium medicae
           WSM419]
          Length = 629

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 58/154 (37%), Gaps = 10/154 (6%)

Query: 50  IAFTKF------VSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW 103
           +A   F       +   L   ++E +  DL R   F +I+++S +        +      
Sbjct: 219 VAVLPFDNYGGDEATGRLADGLTEDIITDLARFPEFKVIARNSTETYKGKAIDVREIG-- 276

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
            +L    +V G + +E  DR+RV  +L D K  + +  +++         I   I++ I 
Sbjct: 277 KALDVGFVVEGSIAREA-DRVRVTAQLIDSKQGRHLWSQRWDRPDKEVFVIQAEIAEQIA 335

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIK-NSLCVM 196
             + G  G         +   V G +    L ++
Sbjct: 336 NRLGGGAGLVQESGRIAAHRKVPGNLNAYELYLL 369


>gi|49477023|ref|YP_035215.1| cell surface protein [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|49328579|gb|AAT59225.1| conserved hypothetical protein, possible cell surface protein
           [Bacillus thuringiensis serovar konkukian str. 97-27]
          Length = 332

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 45/303 (14%), Positives = 94/303 (31%), Gaps = 43/303 (14%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            H      Y +           + +V+ S   G   +++ V+D                 
Sbjct: 12  CHRF----YPAFPPVSPPEVRVLAYVTNSG-DGPTADTISVIDTTTNTEIPPRIPVGDNP 66

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
                +P+  + AY T  DE+ + V     +I+ +P+         +A   S +G RA +
Sbjct: 67  LGIAITPDGLR-AYVTNSDENTVSVISTVHKIEISPRIPVGDGPRGIA--ISPDGSRAYV 123

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           + + +  + I +    +    R++      +S + +PD                Y+  + 
Sbjct: 124 TNRFNNTVSIINTFTNTEIFPRISVGNGP-VSITLTPDGLHA------------YIANAP 170

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQ 393
           G     +S             P G+L   T  +       V    DG+   +    +   
Sbjct: 171 GGTISVVSTTSNTELLQI---PVGNLPIATVITPNGLRAYVTNGTDGTVSVINTASNTEI 227

Query: 394 AP-----------TWSPSGRSLIFSRKKDGD-------TGSKLYSIDLNGRNETLINTPA 435
            P             SP G  +  + + D         T +++  I +  +   +  TP 
Sbjct: 228 FPRISVGNQPRGIAISPDGSRVYVTNELDNTVSVINTFTNTEILQIPVGNQPIRVAITPD 287

Query: 436 YAS 438
            + 
Sbjct: 288 GSR 290


>gi|83769942|dbj|BAE60077.1| unnamed protein product [Aspergillus oryzae]
          Length = 1277

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 84/243 (34%), Gaps = 29/243 (11%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + L       + + R+SP+   + +AT  D   ++++    +      RI        + 
Sbjct: 216 KELYNGNSDAVRDIRWSPS-DGITFATATDSGAIQLWDYR-KTTAPLLRITAHDKPCFSV 273

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-------LTNTLFINIS---ASYS--- 310
            +  +GK  + S   D  + ++  D  S+A  R        T     N+     S++   
Sbjct: 274 DWHPDGKHIV-SGGTDRHVKVW--DFSSSAERRQKPAFQFRTPQAVGNVRWRPPSWNNEY 330

Query: 311 --PDSSQIV--FESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTK 365
                 Q +    S  +   ++++          R     E+   D +W      + +T 
Sbjct: 331 DTSGGWQSIQLVTSYDKEDPRIHLWDLRRPHIPFREFDRYESHAADLLW--HSKDLLWTA 388

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                F     + D      +V   ++ +  WSPSG  L F +K+   +   L + +  G
Sbjct: 389 GEAGVFT----QTDIRYAPQVVNQRSMCSLAWSPSGEVLAFVQKRPRHSTVNLSTTEFVG 444

Query: 426 RNE 428
             E
Sbjct: 445 HPE 447



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 42/252 (16%), Positives = 75/252 (29%), Gaps = 28/252 (11%)

Query: 209 SRDQILFEPRFSPNQQK---------VAYAT-YDDEDILRVYLMDTRIDRAPKRIGNFRS 258
              +IL   R SP+            + Y++  +D   L     D    R  K       
Sbjct: 84  GGKEILKTIRVSPDHSSEEFNLRNAIIGYSSTQNDGSGLSARYKDQLTVRDVKWSHGNYD 143

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            I+A   + NG+  L  +Q+   ++       S    +L          ++    SQ   
Sbjct: 144 TIIATAVA-NGRIVLYDLQRTG-LEYCRFQGHSRQVHKLAFNPHW---PAWLLSGSQD-- 196

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKFAIGVMK 377
            S R    ++          K +      +  D  WSP  G   A T        +   +
Sbjct: 197 SSIRMWDLRM-ASAVRPCSSKELYNGNSDAVRDIRWSPSDGITFA-TATDSGAIQLWDYR 254

Query: 378 KDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET----LIN 432
           K  +   R+   D    +  W P G+ ++       D   K++    +            
Sbjct: 255 KTTAPLLRITAHDKPCFSVDWHPDGKHIV---SGGTDRHVKVWDFSSSAERRQKPAFQFR 311

Query: 433 TPAYASDPQWVG 444
           TP    + +W  
Sbjct: 312 TPQAVGNVRWRP 323


>gi|60729641|pir||JC7987 receptor for activated C kinase, RACK protein - Plasmodium
           falciparum
 gi|32264056|gb|AAO45688.1| activated protein kinase C receptor [Plasmodium falciparum]
 gi|32264058|gb|AAO45689.1| activated protein kinase C receptor [Plasmodium falciparum]
          Length = 323

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 69/204 (33%), Gaps = 12/204 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R       Q + +   S +       ++D      V L D  +    +      S + +
Sbjct: 64  ARKSLTGHSQAINDVSISSDGLFALSGSWDR----SVRLWDLSLGETIRSFIGHTSDVFS 119

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFES 320
             FS + ++ + S  +D+ + +++   Q   T  +T+    +      +SP  +Q +  S
Sbjct: 120 VSFSPDNRQIV-SASRDKTIKLWNTLAQCKYT--ITDQQHTDWITYVRFSPSPNQAIIVS 176

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                + + V      D  +  +           SP G L A +        +  +K +G
Sbjct: 177 C-GWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCA-SGGKDGVAKLWDVK-EG 233

Query: 381 SQERLLVEDSNLQAPTWSPSGRSL 404
                L   S + +  +SP    L
Sbjct: 234 KHLYSLETGSTINSLCFSPCDYWL 257


>gi|289668639|ref|ZP_06489714.1| peptidase [Xanthomonas campestris pv. musacearum NCPPB4381]
          Length = 756

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 9/106 (8%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
           D +QIV+ S+R+G E LY+   +  +  ++I++                 + FT      
Sbjct: 350 DGAQIVWASERDGWEHLYLYDGHSGEVIRQITRGNWVVRKLDRIDEAAGQVYFTASGMQP 409

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSR 408
                      +  DGS    L   +      +SP G+ +  ++SR
Sbjct: 410 GEDPYYRHAYRIGLDGSGFTALTPVAADHEVRYSPDGKWMLDLYSR 455



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 49/132 (37%), Gaps = 12/132 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA-SYSPDSSQIVFESD--RE 323
           +G + + + ++D    +Y  D  S     ++T   ++          + Q+ F +   + 
Sbjct: 350 DGAQIVWASERDGWEHLYLYDGHSGEVIRQITRGNWVVRKLDRIDEAAGQVYFTASGMQP 409

Query: 324 GKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMK 377
           G++      Y +  +GS    ++    A+  +  +SP G  +   +++            
Sbjct: 410 GEDPYYRHAYRIGLDGSGFTALTPV--AADHEVRYSPDGKWMLDLYSRVDLGPVLELRRS 467

Query: 378 KDGSQERLLVED 389
            DGS  R +   
Sbjct: 468 VDGSLARTVEHT 479


>gi|290990698|ref|XP_002677973.1| predicted protein [Naegleria gruberi]
 gi|284091583|gb|EFC45229.1| predicted protein [Naegleria gruberi]
          Length = 628

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/230 (15%), Positives = 86/230 (37%), Gaps = 39/230 (16%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANI--RYLTPSRDQILFEPR--FSPNQQKVAYATY 231
            + +    + +G    +L V   +G +I  + +  SRD         FSP+ + +A  ++
Sbjct: 404 SVAYFGHYIATGTKYGTLFVYSFNGDSISSQPIVNSRDAKEEIAALQFSPDGKYLAAGSH 463

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D+     +YL +T   +  K++    S + +  F+++GK    ++  D  + ++ V  Q 
Sbjct: 464 DN----NIYLYETSTFKVIKKLVGHTSFVKSIDFTTDGKLMR-TLSGDYEVLLWDVS-QG 517

Query: 292 NATER-----------LTNTLFINISASYSPD-------------SSQIVFESDREGKEQ 327
                           +T T+   +   +  D               Q++  +   G+  
Sbjct: 518 KQLTHDGHLEEFDWASVTCTVAWKVRGVWKSDMDGTDINATAVHFGRQLLVSAGDNGRVT 577

Query: 328 LYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            +   +  +  +R+      S+  +  ++  GD +    FS     + +M
Sbjct: 578 TFHYPTATTTPQRVEYLGHCSHVTNVKFTENGDYL----FSAGGGDVCIM 623



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/178 (14%), Positives = 62/178 (34%), Gaps = 15/178 (8%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           Q   + +  D+  L ++   TR      ++     +     F   G     +  K   + 
Sbjct: 367 QTPYFCSCGDDGRLILWNYGTRKHVQQIKVTTKGDLRSVAYF---GHYIA-TGTKYGTLF 422

Query: 284 IYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           +YS +  S +++ + N+           +SPD   +   S       +Y+ +++     +
Sbjct: 423 VYSFNGDSISSQPIVNSRDAKEEIAALQFSPDGKYLAAGSH---DNNIYLYETSTFKVIK 479

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                 +      ++  G L+   +     + + +     SQ + L  D +L+   W+
Sbjct: 480 KLVGHTSFVKSIDFTTDGKLM---RTLSGDYEVLLWDV--SQGKQLTHDGHLEEFDWA 532


>gi|296811408|ref|XP_002846042.1| transcription initiation factor TFIID subunit 5 [Arthroderma otae
           CBS 113480]
 gi|238843430|gb|EEQ33092.1| transcription initiation factor TFIID subunit 5 [Arthroderma otae
           CBS 113480]
          Length = 726

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 88/302 (29%), Gaps = 38/302 (12%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            I G  G     +     +  +     +   MD  G N       +D  +    +S + +
Sbjct: 333 KIDGRSGGVAPGVSVCMFTFHNANQGITC--MDFSGDNTLVAAGMQDSYIRV--WSLDGR 388

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSN------GKRALISVQ 277
            +     D +D              P       ++  AP   S +        R L+S  
Sbjct: 389 PIPATYPDSDDPTPKNSHRLYGHSGP-----VYAVSFAPSIASPDDAEVKTNARWLLSSS 443

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + ++S+DL                S S+ P     V     +   +L+V       
Sbjct: 444 ADQTIRLWSLDL-WRCIVVYKGHAGPVWSLSWGPFGHYFV-SGGHDKTARLWVTNKI--R 499

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           Q+RI    +       + P    + FT  S     +  +    +         N+ A + 
Sbjct: 500 QQRIFAGHDQDVDCVCFHPNSAYV-FTASSDHTVRMWSVSTGNAVRMFTGHTGNITAVSC 558

Query: 398 SPSGRSLIFSRKKD-----------------GDTGSKLYSIDLNGRNETLINTPAYASDP 440
           S  GR L  +                     G     ++S+  +  +  L++  A  +  
Sbjct: 559 SNDGRLLASADDHGTIILWDLAPGRLLKRMRGHAKGSIWSLSWSAESNVLVSGGADGTVR 618

Query: 441 QW 442
            W
Sbjct: 619 VW 620


>gi|195427131|ref|XP_002061632.1| GK17082 [Drosophila willistoni]
 gi|194157717|gb|EDW72618.1| GK17082 [Drosophila willistoni]
          Length = 608

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/218 (15%), Positives = 69/218 (31%), Gaps = 10/218 (4%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       +   ++SP+   +A  + D    +R++    +              I    +
Sbjct: 59  VYTEHSCAVNVAKYSPSGFYIA--SGDASGKIRIWDTVNKEHLLKNEFQPIAGPIKDISW 116

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREG 324
           S + +R +   +  E      +     +   ++  +  IN SA + P     +     + 
Sbjct: 117 SPDNQRIVAVGEGRERFGHVFMSETGTSVGEISGQSKSIN-SADFRPARPFRIVTGSED- 174

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQE 383
              + V +      K   QD         +SP G   A   F G+ +    +  D   + 
Sbjct: 175 -NTIAVFEGPPFKFKMTKQDHTRFVQAVRYSPDGKYFASAGFDGKVYLYDGVSSDLVGEF 233

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   + A  W P G  L+      GD   +L+ +
Sbjct: 234 GSPAHKGGVYAVAWKPDGTQLL---TCSGDKTCRLWQV 268



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 70/212 (33%), Gaps = 21/212 (9%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           I+D   +          S   F   S      K  +     D  N  +L  +  Q +  P
Sbjct: 56  IADVYTEHSCAVNVAKYSPSGFYIASG-DASGKIRIW----DTVNKEHLLKNEFQPIAGP 110

Query: 218 ----RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                +SP+ Q++       E    V++ +T      +  G  +S+  A  F       +
Sbjct: 111 IKDISWSPDNQRIVAVGEGRERFGHVFMSETGTS-VGEISGQSKSINSA-DFRPARPFRI 168

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           ++  +D  + ++          +  +T F+     YSPD       +  +GK  LY    
Sbjct: 169 VTGSEDNTIAVFEGPPFKFKMTKQDHTRFVQAV-RYSPDGKYFA-SAGFDGKVYLY---- 222

Query: 334 NGSDQKRI----SQDKEASYFDPVWSPQGDLI 361
           +G     +    S   +   +   W P G  +
Sbjct: 223 DGVSSDLVGEFGSPAHKGGVYAVAWKPDGTQL 254


>gi|157106216|ref|XP_001649222.1| cell division cycle 20 (cdc20) (fizzy) [Aedes aegypti]
 gi|108879916|gb|EAT44141.1| cell division cycle 20 (cdc20) (fizzy) [Aedes aegypti]
          Length = 476

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 60/187 (32%), Gaps = 20/187 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN----GKRAL 273
            +S    ++A  T+       V + D    +   ++    + + A  ++ +    G R  
Sbjct: 219 SWSERGHQLAVGTHHG----YVTVWDVAASKQVNKLQGHSARVGALAWNGDVLSSGSRDR 274

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQ 332
           + +Q+D             +  RL           +SPD+  +       G   +LYV  
Sbjct: 275 LIMQRDTRTPAQV------SERRLAGHRQEVCGLKWSPDNQYLA----SGGNDNRLYVWN 324

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSN 391
            + ++  +   +  A+     WSP    +  +        I       G   + +   S 
Sbjct: 325 QHSTNPVQSYSEHMAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQ 384

Query: 392 LQAPTWS 398
           +    WS
Sbjct: 385 VCNLAWS 391



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/303 (13%), Positives = 87/303 (28%), Gaps = 38/303 (12%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR---VIKEGKDRLRVEFRLWDVKD 135
           F ++            D      DW++     +  G    +      ++    RL D+  
Sbjct: 159 FKVLDAPEL-----QDDFYLNLVDWSAQNVLAVGLGSCVYLWSACTSQVT---RLCDLSS 210

Query: 136 RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL------------FVSES 183
                      +  SW +  H ++   +           S+ +                 
Sbjct: 211 DAN------TVTSVSWSERGHQLAVGTHHGYVTVWDVAASKQVNKLQGHSARVGALAWNG 264

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTP----SRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            V         +M RD      ++        Q +   ++SP+ Q +A       +  R+
Sbjct: 265 DVLSSGSRDRLIMQRDTRTPAQVSERRLAGHRQEVCGLKWSPDNQYLA----SGGNDNRL 320

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           Y+ +       +      + + A  +S +    L S        I   +  +    +  +
Sbjct: 321 YVWNQHSTNPVQSYSEHMAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVD 380

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T     + ++S  SS++V  +    + Q+ V +     Q                SP G+
Sbjct: 381 TGSQVCNLAWSKHSSELV-STHGYSQNQILVWKYPSLTQVAKLTGHSYRVLYLALSPDGE 439

Query: 360 LIA 362
            I 
Sbjct: 440 AIV 442


>gi|120403323|ref|YP_953152.1| hypothetical protein Mvan_2332 [Mycobacterium vanbaalenii PYR-1]
 gi|119956141|gb|ABM13146.1| hypothetical protein Mvan_2332 [Mycobacterium vanbaalenii PYR-1]
          Length = 815

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 43/235 (18%), Positives = 72/235 (30%), Gaps = 41/235 (17%)

Query: 218 RFSPNQQKVAYA--------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           R +P+   V +         T     + R+   +T  +    R+      +    F+S+G
Sbjct: 465 RVAPDGLHVGFTQLLSSGTATQLVSSVGRLERTETGYEIVEARVVYVGGELK--NFTSDG 522

Query: 270 KRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           K  +I+           D   V L      RLT  L  + S   SP+   +   S R   
Sbjct: 523 KGVMITDFSGRYEAGNADNVLVHLADGTVTRLTANLDYDESVDMSPNGQWLAVGSSRT-- 580

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
              Y+     S   R +       F            F    G      V+  +    R 
Sbjct: 581 -LDYLTPM--SQIVRPTFVPAYVVFPT----------FQAKKGSLNQAWVVSTEDELNRA 627

Query: 386 L------VEDSNLQAPT--WSPSGRSLIF---SRKKDGDTGSKLYSI-DLNGRNE 428
                     +    P   WSP G  + F   S+   GDT   + ++ +++G   
Sbjct: 628 NGIFLGDTSGAYNSVPVANWSPDGSQVAFWERSKTDPGDTRLVVATLNNIDGGTR 682


>gi|3142301|gb|AAC16752.1| Contains similarity to neural cell adhesion molecule 2, large
           isoform precursor gb|M76710 from Xenopus laevis, and
           beta transducin from S. cerevisiae gb|Q05946. ESTs
           gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
           gb|H36304, and gb|N65606 come from this gene
           [Arabidopsis thaliana]
          Length = 838

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 64/188 (34%), Gaps = 20/188 (10%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQ 315
               +A  FSS+G+             +  +D ++    + LT          + P  S+
Sbjct: 106 PRSTIAAAFSSDGRTLA---STHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSE 162

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           IV     + + +L+   +   +  R + D         +   G+L+A     G K  I  
Sbjct: 163 IVASGSLDHEVRLW--NAKTGECIR-THDFYRPIASIAFHAGGELLAVAS--GHKLHIWH 217

Query: 376 MKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             K G       +L    +L+A  + P G  L+ + +           ID +    T   
Sbjct: 218 YNKGGDDSAPAIVLKTRRSLRAVHFHPHGVPLLLTAEVT--------DIDSSDSAMTRST 269

Query: 433 TPAYASDP 440
           +P Y   P
Sbjct: 270 SPGYLRYP 277



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 66/228 (28%), Gaps = 37/228 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + + +A    D      V ++D    +  K +   R      RF       + S  
Sbjct: 113 AFSSDGRTLASTHGDH----TVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGS 168

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + ++  + ++    R T+  +    S ++      +   S    K  ++     G 
Sbjct: 169 LDHEVRLW--NAKTGECIR-THDFYRPIASIAFHAGGELLAVAS--GHKLHIWHYNKGGD 223

Query: 337 D-QKRISQDKEASYFDPVWSPQGDLI--------------AFTKFSGEKF------AIGV 375
           D    I      S     + P G  +              A T+ +   +      AI  
Sbjct: 224 DSAPAIVLKTRRSLRAVHFHPHGVPLLLTAEVTDIDSSDSAMTRSTSPGYLRYPPPAIFF 283

Query: 376 MKKDGSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSK 417
                     L  +  L         ++S     +++S    G   ++
Sbjct: 284 TNTQSGSRTSLAAELPLVPLPYLLLPSYSADDPRILYSSGTTGPRNAQ 331


>gi|289661686|ref|ZP_06483267.1| peptidase [Xanthomonas campestris pv. vasculorum NCPPB702]
          Length = 756

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 9/106 (8%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
           D +QIV+ S+R+G E LY+   +  +  ++I++                 + FT      
Sbjct: 350 DGAQIVWASERDGWEHLYLYDGHSGEVIRQITRGNWVVRKLDRIDEAAGQVYFTASGMQP 409

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSR 408
                      +  DGS    L   +      +SP G+ +  ++SR
Sbjct: 410 GEDPYYRHAYRIGLDGSGFTALTPVAADHEVRYSPDGKWMLDLYSR 455



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 49/129 (37%), Gaps = 12/129 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA-SYSPDSSQIVFESD--RE 323
           +G + + + ++D    +Y  D  S     ++T   ++          + Q+ F +   + 
Sbjct: 350 DGAQIVWASERDGWEHLYLYDGHSGEVIRQITRGNWVVRKLDRIDEAAGQVYFTASGMQP 409

Query: 324 GKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMK 377
           G++      Y +  +GS    ++    A+  +  +SP G  +   +++            
Sbjct: 410 GEDPYYRHAYRIGLDGSGFTALTPV--AADHEVRYSPDGKWMLDLYSRVDLGPVLELRRS 467

Query: 378 KDGSQERLL 386
            DGS  R +
Sbjct: 468 ADGSLARTV 476


>gi|170723051|ref|YP_001750739.1| oligopeptidase B [Pseudomonas putida W619]
 gi|169761054|gb|ACA74370.1| Oligopeptidase B [Pseudomonas putida W619]
          Length = 680

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 80/273 (29%), Gaps = 45/273 (16%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I ++       +   + +   +      ++  C    D AN   +  S++Q+L +P    
Sbjct: 63  ILETDLSLPSPWGPYLYYTRTTAGDEYPRHYRCPRPADDAN--TVDESQEQLLLDPNALA 120

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--QKD 279
           N   +A                         +G F         S + +    S+    D
Sbjct: 121 NGGFLA-------------------------LGGF-------SVSPDHRLLAYSLDTSGD 148

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSD 337
           E   +Y  DL S     L      + S +++ DS  + F    D     +L       + 
Sbjct: 149 EVYTLYVKDLASGNLTALPFD-DCDGSLTWANDSQTLFFAELDDTHRPWRLRRHTLGETG 207

Query: 338 QKRISQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            + + ++ +  +F   + +     +     S       V+  +  +E         +   
Sbjct: 208 AQAVFEEPDGRFFLHCYRASSERQLVLLLNSKTTSEAWVLDAETPKEAFTCLAPRAEGHE 267

Query: 397 WSP-----SGRSLIFSRKKDGDTGSKLYSIDLN 424
           + P      G+   F R         LY    +
Sbjct: 268 YFPDHGQLDGQWRWFIRSNQDGINFALYQAAAD 300


>gi|158336168|ref|YP_001517342.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158306409|gb|ABW28026.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 329

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/234 (12%), Positives = 78/234 (33%), Gaps = 20/234 (8%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V + +   +       +  + +  + P Q  +A   +    I + +  D  I   P    
Sbjct: 109 VWEVETQQVLTTLAFENSSVLDLAWHPQQDWLAVGGHQGVKIWQDWDQDPAIRELP---- 164

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                 +   +S +G+    S   D  M ++    + +   R+T         ++S D+ 
Sbjct: 165 ---GSSICVSWSPDGQYLA-SGNLDRTMVVW--PSEEDVPWRMTGFPGKVRQIAWSADAE 218

Query: 315 QIVFE---SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            +  +   S   G       +     +  + ++   +     + P   L+  +  + +  
Sbjct: 219 SVDADPLLSAASGNCITTWHRLGSGWEAELLEEHTQAVNAIAFQPNTTLLV-SAAADDFL 277

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +    + G +     +  +  A  WSP G++L    ++      +L++    G
Sbjct: 278 CLW---QGGGKLVQAQKSISGSALAWSPDGQTLALGGQQG---EWQLWTQSARG 325


>gi|117929128|ref|YP_873679.1| hypothetical protein Acel_1921 [Acidothermus cellulolyticus 11B]
 gi|117649591|gb|ABK53693.1| conserved hypothetical protein [Acidothermus cellulolyticus 11B]
          Length = 351

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 97/304 (31%), Gaps = 56/304 (18%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
           +     R+      D +Y +         +R L    +    +   S  V D    N+R 
Sbjct: 88  TPAGPARRFTTIACDRVYAA---------ARTLLCLAAKRGVVTTYSAVVYD---ENLRP 135

Query: 206 LTP-SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +   +   +    R SP+ +  ++  +   D      + T        +      ++A  
Sbjct: 136 VHRIALPGLPSRARLSPDGRIASWTVFVYGDSY----LSTGFSTRTAILDTTTGNLIA-- 189

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESD 321
                            ++ +S+ L             ++++    +++ D +       
Sbjct: 190 ----------------NLETFSIVLNGRP------YSSVDVNFWGVTFAADDNTFYATLS 227

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK----FAIGVMK 377
             G+  L          +R       +   P  SP G  + F K         + + V+ 
Sbjct: 228 TRGQTYLVKGDM----ARRTVVSLRTNVECPSLSPDGTRLVFKKRVSSDARAPWRLAVLN 283

Query: 378 KDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDG-DTGSKLYSIDLNGRNE-TLINTP 434
               QE LL E  +      W    ++++++  + G   GS L+S+  +G  +   + T 
Sbjct: 284 VATMQETLLAETRSVDDQAVWL-DNQTVLYAMPEGGASAGSDLWSVPADGGGKPQKVLTG 342

Query: 435 AYAS 438
           A++ 
Sbjct: 343 AFSP 346


>gi|67516159|ref|XP_657965.1| hypothetical protein AN0361.2 [Aspergillus nidulans FGSC A4]
 gi|40746611|gb|EAA65767.1| hypothetical protein AN0361.2 [Aspergillus nidulans FGSC A4]
          Length = 1280

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 54/336 (16%), Positives = 102/336 (30%), Gaps = 60/336 (17%)

Query: 142  KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
            + +F+  A +R  A +       +  GE     S     S ++VSG   ++  + D D  
Sbjct: 885  QLYFTPQAIFRVKAVSRCSASI-AGHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTG 943

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
               +        +    +SPN   +A  + D  + +R++             G+ +  I 
Sbjct: 944  TPLHTLKGHTSWVLAVSYSPNGAMIATGSMD--NTVRIWDAKKGQALGAPLKGHVK-WIT 1000

Query: 262  APRFSS-----NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            +  +       +G   L S  KD  + I+ V +   A   L+          +       
Sbjct: 1001 SLAWEPYHLQQSGHPRLASASKDSTVRIWDV-ISKRADIVLSGHKGSVTCVRWGGTGK-- 1057

Query: 317  VFESDREGKEQLYVMQSNGSDQKR------------------ISQDKEASYFDPVWSPQG 358
            ++ S  +    + V  S      +                  I +     +   V     
Sbjct: 1058 IYTSSHD--RTIKVWNSQTGTLIQTLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDA 1115

Query: 359  DLIAFTKFS------------------GEKFAIGVMKKDGSQ---ERLLVEDSNLQAPTW 397
            D +A  K                     + F + +   + S     RLL     +   T+
Sbjct: 1116 DKVAMAKKRFEKAATINNKIVEKLVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTF 1175

Query: 398  SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
            SP    + +      D   KL+    NGR+   I T
Sbjct: 1176 SPD---MAYIASAGFDNHVKLW----NGRDGKFITT 1204



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/132 (14%), Positives = 42/132 (31%), Gaps = 4/132 (3%)

Query: 273  LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            L+S   D  M ++  +  S    RL          ++SPD   + + +       + +  
Sbjct: 1139 LVSASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPD---MAYIASAGFDNHVKLWN 1195

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                      +    + +   +S    L+  +        +  ++     E L      +
Sbjct: 1196 GRDGKFITTLRGHVGAVYQCCFSADSRLLV-SSSKDTTLKVWNVRTGKLSEDLPGHKDEV 1254

Query: 393  QAPTWSPSGRSL 404
             A  WSP G+ +
Sbjct: 1255 FAVDWSPDGQKV 1266



 Score = 40.4 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 33/132 (25%), Gaps = 8/132 (6%)

Query: 232  DDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-L 289
               D   +YL D      P  R+   +  +    FS +               +   +  
Sbjct: 1141 SASDDFTMYLWDPESSSKPVARLLGHQKEVNHVTFSPD---MAYIASAGFDNHVKLWNGR 1197

Query: 290  QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                   L   +       +S DS  +V  S       L V               +   
Sbjct: 1198 DGKFITTLRGHVGAVYQCCFSADSRLLVSSSK---DTTLKVWNVRTGKLSEDLPGHKDEV 1254

Query: 350  FDPVWSPQGDLI 361
            F   WSP G  +
Sbjct: 1255 FAVDWSPDGQKV 1266



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/100 (13%), Positives = 40/100 (40%), Gaps = 8/100 (8%)

Query: 173  FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
            F+  + +++ +     +K  L    RDG             +++  FS + + +  ++ D
Sbjct: 1175 FSPDMAYIASAGFDNHVK--LWN-GRDGK-FITTLRGHVGAVYQCCFSADSRLLVSSSKD 1230

Query: 233  DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
                  + + + R  +  + +   +  + A  +S +G++ 
Sbjct: 1231 T----TLKVWNVRTGKLSEDLPGHKDEVFAVDWSPDGQKV 1266


>gi|333029462|ref|ZP_08457523.1| Dipeptidyl-peptidase IV [Bacteroides coprosuis DSM 18011]
 gi|332740059|gb|EGJ70541.1| Dipeptidyl-peptidase IV [Bacteroides coprosuis DSM 18011]
          Length = 710

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 82/235 (34%), Gaps = 46/235 (19%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-------------- 264
           +SP+   +A+   D+  +    L+D     A      +  M   P               
Sbjct: 191 WSPSGSLLAFYKKDESMVTEYPLVDITTRIATVENVRYP-MAGMPSHKVEIGIYDVKTEK 249

Query: 265 ------------------FSSNGKRA-LISVQKDEA-MDIYSVDLQSNATERLTNTLFIN 304
                             ++ + K   LI V +D+    +   D+QS    ++       
Sbjct: 250 ITYLNTGDPTDRFFTNISWAPDEKSVYLIEVNRDQNHAQLCQFDIQSGELIQVLYEESHP 309

Query: 305 --ISA----SYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
             +       + P ++ Q +++S+++G   LY+    G   ++++Q +        ++ +
Sbjct: 310 KYVEPQNPIVFLPWNNKQFIYQSEKDGFNHLYLYDVEGKLIRQLTQGEWLVQSIVGFNEK 369

Query: 358 GDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSR 408
              I    T +S  +  +  +  +  + R L     +  P  S SG+ LI  +S 
Sbjct: 370 QKEIILTTTTYSPLQSNLIAVSVNSGKRRSLDNKEGVHRPNLSTSGKYLIDNYSS 424


>gi|308484047|ref|XP_003104224.1| CRE-EIF-3.B protein [Caenorhabditis remanei]
 gi|308258193|gb|EFP02146.1| CRE-EIF-3.B protein [Caenorhabditis remanei]
          Length = 725

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/227 (15%), Positives = 82/227 (36%), Gaps = 31/227 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALIS 275
           +SP    +AY +   + +            + +R+ + R   +A     +  +GKR    
Sbjct: 364 WSPTATILAYYSECTDAVPA--EFGLLQVPSMQRLRSARVHNVADAQMFWQKSGKRLAFY 421

Query: 276 VQKDE------------------AMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI 316
             + +                   +DI+ +D +  +   L  +  FI+    + P+  + 
Sbjct: 422 TMRYKKKEFRETGEVKYVGGCQCHVDIFEIDKKDVSLMNLPLSEPFIHFD--WDPEGDKF 479

Query: 317 VF--ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAI 373
                ++ +   Q+Y +++N    K IS+     +F+ V ++P+G  +A          +
Sbjct: 480 CVLVGNNAKATPQVYRIEANSHAPKLISKLDAGVHFNEVQFAPKGGWLAVLAKVSAGGNV 539

Query: 374 GVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +    ++ +    +E        W P+GR         G  G+ L
Sbjct: 540 YFIDTSLAEAKRTNVIEHPLFNKGYWDPTGRYFATCSTLGGRAGADL 586


>gi|296103309|ref|YP_003613455.1| 6-phosphogluconolactonase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295057768|gb|ADF62506.1| 6-phosphogluconolactonase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 331

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 71/234 (30%), Gaps = 16/234 (6%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 2   KQTVYTASPESQQIHVWRLNAEGTLTLVQVVDVPGQVQPMAISPDKRFLYVGVRPEFRVL 61

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPDSS-QIVFESDREGKEQLYVMQSNGSDQKRI 341
            Y +     A    T    +  S +  S D     VF S       + V +         
Sbjct: 62  AYRISPDDGALTY-TAEAPLPGSPTHISTDRQGNFVF-SGSYNAGCVSVTRLEEGIPVET 119

Query: 342 SQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNLQ 393
               E          SP    +       ++  +  +  DG        E   VE +  +
Sbjct: 120 VDVVEGLEGCHSANISPDNRTLWVPALKQDRICLFTLSDDGHLVAQNPAEVTTVEGAGPR 179

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
              + P+ +   +   +   +       D NG+ E   TL   P+  SD +W  
Sbjct: 180 HMVFHPN-QQYAYVVNELNSSVDVWELKDPNGQIECVQTLDMMPSDFSDTRWAA 232


>gi|312200259|ref|YP_004020320.1| hypothetical protein FraEuI1c_6471 [Frankia sp. EuI1c]
 gi|311231595|gb|ADP84450.1| WD40 repeat, subgroup [Frankia sp. EuI1c]
          Length = 251

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 21/173 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---IL 261
            L P     +    FSP+   +A  TY+      + L D      PK IGN  +    +L
Sbjct: 73  TLPPGPTSAVSSVAFSPDGHTLAAGTYEG-----LKLWDVTQPAHPKPIGNPNNSLHPLL 127

Query: 262 APRFSSNGKRALISVQKD-------EAMDIYSVDLQSNATERLTNTLFIN---ISASYSP 311
           +  FS N      +V           ++ ++++        RL      +    S ++SP
Sbjct: 128 SVAFSPNRHTLAAAVGPGPTGSDTYGSVWLWNIS-DPAHPTRLDTPTGADPLVTSVAFSP 186

Query: 312 DSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           D   +   S       +++    N +   ++     +  +   +SP G  +A 
Sbjct: 187 DGHTLA-ASAGGQVGGVWLWNVVNPTHPVQLKALPTSLPYSLAFSPDGRTLAV 238



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 61/176 (34%), Gaps = 15/176 (8%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           S + +  FS +G        +   +   +            N+L   +S ++SP+   + 
Sbjct: 80  SAVSSVAFSPDGHTLAAGTYEGLKLWDVTQPAHPKPIGNPNNSLHPLLSVAFSPNRHTLA 139

Query: 318 FE-------SDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTK--F 366
                    SD  G   L+ +  + +   R+     A        +SP G  +A +    
Sbjct: 140 AAVGPGPTGSDTYGSVWLWNIS-DPAHPTRLDTPTGADPLVTSVAFSPDGHTLAASAGGQ 198

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            G  +   V+      +   +  S   +  +SP GR+L      D    ++L++ D
Sbjct: 199 VGGVWLWNVVNPTHPVQLKALPTSLPYSLAFSPDGRTLAVGCSDD---TTRLWTAD 251



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 45/134 (33%), Gaps = 11/134 (8%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDIL----RVYLMDTRIDRAPKRIGNFRS---MI 260
            +    L    FSPN+  +A A             V+L +      P R+        ++
Sbjct: 120 NNSLHPLLSVAFSPNRHTLAAAVGPGPTGSDTYGSVWLWNISDPAHPTRLDTPTGADPLV 179

Query: 261 LAPRFSSNGKRALISVQKD-EAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVF 318
            +  FS +G     S       + +++V +      +L      +  S ++SPD   +  
Sbjct: 180 TSVAFSPDGHTLAASAGGQVGGVWLWNV-VNPTHPVQLKALPTSLPYSLAFSPDGRTLA- 237

Query: 319 ESDREGKEQLYVMQ 332
               +   +L+   
Sbjct: 238 VGCSDDTTRLWTAD 251


>gi|260912225|ref|ZP_05918777.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260633659|gb|EEX51797.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 728

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 46/326 (14%), Positives = 100/326 (30%), Gaps = 40/326 (12%)

Query: 73  LQRSDVFNLISQDSFKQKITNPDSI-PRFQDWNSLG-AQVLVTGR--VIKEGKDRLRVEF 128
           L  S    ++     KQ +   D+    F DWN+   A   V G    +  G+  L+   
Sbjct: 113 LLNSSKMRMLVNWKTKQVVWKQDAKDENFADWNAQSRAVAFVKGDNLYVNNGQGTLK--- 169

Query: 129 RLWDVKDRKQIIGKK--------FFSS--PASWRKIAHTISDDI----YQSI-TGEKGDF 173
           +L     R  + G+         +  +      +K+A    D      Y  +    +   
Sbjct: 170 QLTKDGSRDIVYGQSVHRDEFGIYKGTFWSNDGQKLAFYRMDQSMVADYPLVDIDTRIAT 229

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY-D 232
            + + +      S ++   +  ++ D           D+      ++P+ + +       
Sbjct: 230 ETPVRYPMAGEKSHLVTVGIYDLNTDKTVYLNTGDPTDRYFTNIAWAPDGKLIYLIEMNR 289

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMIL-----APRFSS-NGKRALISVQKDEAMDIYS 286
            ++   +   D         +    S        A  F   +  R ++  +KD    +Y 
Sbjct: 290 AQNHYSLDAYDPATGNKTATLYTESSDKYVHPMHAITFIPWDKSRFILQSEKDGYNHLYL 349

Query: 287 VDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQ 343
            D      ++LT   +I +    ++  + + +  S      +  LY +      ++ +  
Sbjct: 350 FDTGGKQIKQLTTGKWIVVDLLGFNAKTKEAIILSTEASPIQNNLYAVNLQTGTRRLLDN 409

Query: 344 DK--------EASYFDPVWSPQGDLI 361
            K        E     P  S  G  I
Sbjct: 410 GKGCHANTTDEGGSHKPALSFSGQWI 435



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 58/186 (31%), Gaps = 32/186 (17%)

Query: 265 FSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           +S++G++     + +    D   VD+ +                 Y     +        
Sbjct: 198 WSNDGQKLAFYRMDQSMVADYPLVDIDTRIAT--------ETPVRYPMAGEK-------S 242

Query: 324 GKEQLYVMQSNGSDQKRISQD--KEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKD 379
               + +   N      ++     +  + +  W+P G LI       +   +++      
Sbjct: 243 HLVTVGIYDLNTDKTVYLNTGDPTDRYFTNIAWAPDGKLIYLIEMNRAQNHYSLDAYDPA 302

Query: 380 GSQERLL--VEDSN-----LQAPTWSP--SGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
              +      E S+     + A T+ P    R ++   + + D  + LY  D  G+    
Sbjct: 303 TGNKTATLYTESSDKYVHPMHAITFIPWDKSRFIL---QSEKDGYNHLYLFDTGGKQIKQ 359

Query: 431 INTPAY 436
           + T  +
Sbjct: 360 LTTGKW 365


>gi|300777139|ref|ZP_07086997.1| prolyl oligopeptidase [Chryseobacterium gleum ATCC 35910]
 gi|300502649|gb|EFK33789.1| prolyl oligopeptidase [Chryseobacterium gleum ATCC 35910]
          Length = 668

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 62/162 (38%), Gaps = 10/162 (6%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           ++  D  N +Y             F  SP+ + ++Y   D +    VY+ D    +  K 
Sbjct: 46  LISYDKGNFKYKVEDYFARPKASAFKISPDGKYLSYKEKDQDKKNHVYVKDLGTGKITKA 105

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDI--YSVDLQSNATERLTNTLFINISASYS 310
           I     +I    +  N KR   +  +    +I  Y+ D+     + LT    + +  S  
Sbjct: 106 IVEKDDLIRGYGW-LNKKRLFYTQDRGGNENIHLYATDIDGGNQKDLTPFDGVKVQ-SII 163

Query: 311 P--DSSQIVFESDREGKEQL--YVMQSNGSDQKRISQDKEAS 348
           P  D+  +V   ++  K+    + +     +  ++ ++K+ +
Sbjct: 164 PIKDTDFVVVTMNKNNKQIFEPFKINFVTGEMTQLYENKDVN 205



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 354 WSPQGDLIAFT-KFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKK 410
            SP G  +++  K   +K  + V      +    ++ +D  ++   W  + + L +++ +
Sbjct: 72  ISPDGKYLSYKEKDQDKKNHVYVKDLGTGKITKAIVEKDDLIRGYGWL-NKKRLFYTQDR 130

Query: 411 DGDTGSKLYSIDLNGRNET 429
            G+    LY+ D++G N+ 
Sbjct: 131 GGNENIHLYATDIDGGNQK 149


>gi|222111365|ref|YP_002553629.1| 40-residue yvtn family beta-propeller repeat-containing protein
           [Acidovorax ebreus TPSY]
 gi|221730809|gb|ACM33629.1| 40-residue YVTN family beta-propeller repeat protein [Acidovorax
           ebreus TPSY]
          Length = 348

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 66/200 (33%), Gaps = 19/200 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGA-----NIRYLTPSRDQILFEPRF---SPNQQKVAYATY 231
           V  SV  G+ +    VM+  GA     +      ++  +   P     SP+  ++AY T 
Sbjct: 84  VDASVHKGMAQGDHAVMETGGAVWAIDSATNEVVAKVPVGMHPAHVVVSPDG-RLAYVTN 142

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
             ++ + V     R   A   +G F       RFS +GK   ++  K   +    +D  S
Sbjct: 143 GGDNTVSVIDTTARSLVATISVGQFP---HGLRFSPDGKEVYVANLKGGTVS--VIDTAS 197

Query: 292 -NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                ++           ++PD  ++ F S   G+  + V+        R          
Sbjct: 198 QKEVAQVPAGKGP-AQTGFTPDG-RLAFASL-SGENAIAVIDPATRKVIRKVAVGTVPIQ 254

Query: 351 DPVWSPQGDLIAFTKFSGEK 370
               +P    +        K
Sbjct: 255 LYA-TPDSRTLLVANQGTRK 273


>gi|254181279|ref|ZP_04887876.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
 gi|184211817|gb|EDU08860.1| conserved hypothetical protein [Burkholderia pseudomallei 1655]
          Length = 411

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D + V +R +D    +        +   S+ 
Sbjct: 33  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYV-YR-FDTDSGRVSPVSSAKAENPSYL 90

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 91  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 148

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 149 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 208

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 209 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 242

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    +  +       
Sbjct: 243 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLVHVETVPMTAPGF 302

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 303 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 347


>gi|145219870|ref|YP_001130579.1| prolyl oligopeptidase [Prosthecochloris vibrioformis DSM 265]
 gi|145206034|gb|ABP37077.1| oligopeptidase B, Serine peptidase, MEROPS family S09A [Chlorobium
           phaeovibrioides DSM 265]
          Length = 732

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 35/113 (30%), Gaps = 11/113 (9%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL--APRF-----SS--NGKRA 272
           +  +  Y     +D                 + +  S+     P F     S   +GK  
Sbjct: 111 DSNRYFYLKRTPKDETGKLFFRNGFKGKETLLFDPESLSEENGPTFVVSSHSPSDDGKTL 170

Query: 273 LISVQKDEAMD--IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            ISV  + + D  I  +D+ S      T       S S++ D    ++   R 
Sbjct: 171 AISVSANGSEDDSILIMDVDSGKLYSETIDRCRFASPSWTKDGKSFLYNRMRT 223



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 33/93 (35%), Gaps = 3/93 (3%)

Query: 350 FDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIF 406
                S  G  +A +  +      +I +M  D  +      D     +P+W+  G+S ++
Sbjct: 159 SSHSPSDDGKTLAISVSANGSEDDSILIMDVDSGKLYSETIDRCRFASPSWTKDGKSFLY 218

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +R +      +    D +     +   PA   +
Sbjct: 219 NRMRTVSGPEENPQYDSSTWLHRIGTDPAEDRE 251


>gi|326468942|gb|EGD92951.1| periodic tryptophan protein 2 [Trichophyton tonsurans CBS 112818]
          Length = 911

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 67/197 (34%), Gaps = 13/197 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ +K+  A  D +    + + D +           +S + A  F+  G   L +   
Sbjct: 344 YSPDGRKIITAADDGK----IKVWDIKTGFCIVTFTEHKSGVTACEFTKRGN-VLFTASL 398

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++    +  T    ++ S S + D S  +  +       +++        
Sbjct: 399 DGSVRAWDL-VRYRNFKTFTAPSRLSFS-SLAVDPSGEIVCAGSLDSFDIHIWSVQTGQL 456

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLLVEDSNLQAPT 396
                  E       +S  G  +    +      I  +  +   S+   L   S++    
Sbjct: 457 LDQLSGHEGPVSSLSFSADGSHVVSGSWD-RTVRIWSIFGRSQTSEPLQL--QSDVLCVA 513

Query: 397 WSPSGRSLIFSRKKDGD 413
           + P GR +  +   DG 
Sbjct: 514 FRPDGRQIA-ASTLDGQ 529



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 34/211 (16%), Positives = 84/211 (39%), Gaps = 22/211 (10%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +A+ +     +L V+   +      K+ G+  SM  A  +S +G++  I+   D  + 
Sbjct: 306 EWLAFGSSKLGQLL-VWEWQSE-SYILKQQGHLDSMN-ALVYSPDGRKI-ITAADDGKIK 361

Query: 284 IYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           ++  D+++       T       +  ++   + ++F +  +G  + + +     + K  +
Sbjct: 362 VW--DIKTGFCIVTFTEHKSGVTACEFTKRGN-VLFTASLDGSVRAWDL-VRYRNFKTFT 417

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWS 398
                S+      P G+++         F I +        +LL + S  + P    ++S
Sbjct: 418 APSRLSFSSLAVDPSGEIVCAGSLD--SFDIHIWSVQTG--QLLDQLSGHEGPVSSLSFS 473

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             G  ++       D   +++SI   GR++T
Sbjct: 474 ADGSHVVSGSW---DRTVRIWSIF--GRSQT 499



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D   +++   +  +   ++      + +  FS++G   ++S   D  + I+S+  +S  +
Sbjct: 442 DSFDIHIWSVQTGQLLDQLSGHEGPVSSLSFSADGSH-VVSGSWDRTVRIWSIFGRSQTS 500

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           E L       +  ++ PD  QI   S  +G+   + +
Sbjct: 501 EPL-QLQSDVLCVAFRPDGRQIA-ASTLDGQLTFWSV 535



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 26/81 (32%), Gaps = 5/81 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               +  +    FS +   V   ++D      V +               +S +L   F 
Sbjct: 460 LSGHEGPVSSLSFSADGSHVVSGSWDR----TVRIWSIFGRSQTSEPLQLQSDVLCVAFR 515

Query: 267 SNGKRALISVQKDEAMDIYSV 287
            +G++   +   D  +  +SV
Sbjct: 516 PDGRQIA-ASTLDGQLTFWSV 535


>gi|291295534|ref|YP_003506932.1| Acylaminoacyl-peptidase [Meiothermus ruber DSM 1279]
 gi|290470493|gb|ADD27912.1| Acylaminoacyl-peptidase [Meiothermus ruber DSM 1279]
          Length = 618

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 79/248 (31%), Gaps = 45/248 (18%)

Query: 221 PNQQKVAYAT---YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           P  + +   T     ++D  R        D   + +   +    AP +   G+    + +
Sbjct: 21  PAGKPLFVYTDIERPEKDPPRYRSRLATWDGGLRFLT--QGEAKAPFWR--GEYIYFTRK 76

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------FESDREGKEQLYVM 331
            D+A  ++ + L     E++T           SPD  +I       +E  +    ++Y  
Sbjct: 77  VDKASQLFRLPLSGGEAEQVTQLKAGIEGYKVSPDGRRIALLTRGEYEPPKPDAPRIYET 136

Query: 332 QSNGSDQKRISQDKEASYF------------------DPVWSPQGDLIAFTKFS------ 367
                D + +   +    +                  D  WSP GD + FT  S      
Sbjct: 137 WPVKFDGRGLLPGQPRELWLWEDGQAKPLVKLAQDVEDVAWSPAGDGLYFTASSAPQERW 196

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGR--SLIFSRKKDGDTGSKLYSID 422
           G       +  DG Q   L           PT  P G    L  + ++ G T  KL+   
Sbjct: 197 GWIQRAYHVGLDG-QVNELFGGVGPIVGLEPT--PDGGLVYLAHAWERGGGTEHKLHYRS 253

Query: 423 LNGRNETL 430
            +G+   L
Sbjct: 254 ADGQVRVL 261


>gi|255039482|ref|YP_003090103.1| surface antigen (D15) [Dyadobacter fermentans DSM 18053]
 gi|254952238|gb|ACT96938.1| surface antigen (D15) [Dyadobacter fermentans DSM 18053]
          Length = 1072

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 66/191 (34%), Gaps = 22/191 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALISV 276
           +S N      A  +D+  L +Y          K   N R +  I+    S +G    +S 
Sbjct: 365 WSKNNVLTILANENDKKNLYMYENVGTKKIRIKTKRNIRGLDQIVDMDVSHDGSMLAVSA 424

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP-DSSQIVFESDR------------- 322
            K    D++ + +   +T  LTN L+ ++S  +    S ++VF S+R             
Sbjct: 425 DKAGQNDLFLISVARASTLPLTNDLYDDLSPRFIQGSSRRVVFSSNRPVDSLGTGDKGNF 484

Query: 323 -EGKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                   + + +G+ +      + + +  +   PV++   D + +         +    
Sbjct: 485 KSIAPSYTIFEHDGAPRTGTIVKLVETEGKTKVTPVYADDND-VVYLSNGKGVNNLYKYN 543

Query: 378 KDGSQERLLVE 388
           +       L  
Sbjct: 544 RASQTSSQLTN 554



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 34/227 (14%), Positives = 80/227 (35%), Gaps = 18/227 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +    S   +    RF  + +  AY     ++  + Y       +      N       
Sbjct: 252 EQTSITSTLGVQSYNRFLRDWR--AYYLNQTKNAEQFYTDPNPTWKYKLNEFNVTDASAV 309

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDS 313
            + S + K   +S  K+    +Y  D +S + + +       I            +S ++
Sbjct: 310 IKVSPDKKFTAVSEIKNGRYRVYLFDSESGSKKVVRQGKLDIIGGRMKTQPPLLGWSKNN 369

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLIAFTKFSGE 369
              +  ++ + K+ LY+ ++ G+ + RI   +     D       S  G ++A +     
Sbjct: 370 VLTILANEND-KKNLYMYENVGTKKIRIKTKRNIRGLDQIVDMDVSHDGSMLAVSADKAG 428

Query: 370 KFAIGVMKKDGSQERLLVED-SNLQAPTWS-PSGRSLIFSRKKDGDT 414
           +  + ++    +    L  D  +  +P +   S R ++FS  +  D+
Sbjct: 429 QNDLFLISVARASTLPLTNDLYDDLSPRFIQGSSRRVVFSSNRPVDS 475


>gi|195435772|ref|XP_002065853.1| GK20426 [Drosophila willistoni]
 gi|194161938|gb|EDW76839.1| GK20426 [Drosophila willistoni]
          Length = 669

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 66/163 (40%), Gaps = 11/163 (6%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLF-IN 304
           +  + + +    + + +FS +G +   +  KD  + I+ VD    +    R+ +    ++
Sbjct: 344 QTIQILTDHCDEVWSCKFSPDGLKLA-TGSKDSTVIIWDVDPYKLTLKHRRVLDGPAQVS 402

Query: 305 ISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIA 362
           +S  S+SPDS +++     E   +LY+   +      + SQ  E S      S  G    
Sbjct: 403 VSFVSWSPDS-KLILVGGTEDSHELYIWNVDDGKLVVKFSQSLEDSLACGAISRDGSRFV 461

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                G+K  + +   +G+      E   + +  +    ++++
Sbjct: 462 ---CGGQKGQLYLCDLNGTIVDSW-EGVRVNSIAFRADNKTIL 500



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 57/144 (39%), Gaps = 11/144 (7%)

Query: 199 DGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GN 255
           DG  ++ +         ++  +FSP+  K+A  + D   I+          +  + + G 
Sbjct: 339 DGFPMQTIQILTDHCDEVWSCKFSPDGLKLATGSKDSTVIIWDVDPYKLTLKHRRVLDGP 398

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPD 312
            +  +    +S + K  L+   +D + ++Y  ++       +  +  +  S    + S D
Sbjct: 399 AQVSVSFVSWSPDSKLILVGGTED-SHELYIWNVDDGKLV-VKFSQSLEDSLACGAISRD 456

Query: 313 SSQIVFESDREGKEQLYVMQSNGS 336
            S+ V       K QLY+   NG+
Sbjct: 457 GSRFVCG---GQKGQLYLCDLNGT 477


>gi|149042655|gb|EDL96292.1| rCG49840 [Rattus norvegicus]
          Length = 830

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 80/232 (34%), Gaps = 31/232 (13%)

Query: 184 VVSGIIKNSLCVMDRDG-----ANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDIL 237
           V     +  L  +   G          +     + ++  RF P     +A ++YD    L
Sbjct: 535 VAGEDARIRLWRVPPGGLKNVLTTPETVLTGHTEKIYSLRFHPLAADVLASSSYD----L 590

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + D +      R+   +  I +  +S +GK+   +V KD  + +Y  D +S+    L
Sbjct: 591 TIRIWDLQAGTEQLRLQGHQDQIFSLAWSPDGKQLA-TVCKDGRVRVY--DPRSSPL-PL 646

Query: 298 TNTLFINISA----SYSPDSSQIV---FESDREGKEQLYVMQS-NGSDQKRISQDKEASY 349
            +             +  +   ++   F+S  E + QLY+  +        +  D   S 
Sbjct: 647 QDGPGPEGGRGARIVWVCNGGCLLVSGFDSRSERQLQLYMADALAEGPSALLGLDVAPST 706

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPS 400
             P + P   L+  T     +  +         E +      L+  ++ SP 
Sbjct: 707 LLPSYDPDTGLVLLTGKGDTRVFLY--------EVIPEAPFFLECNSFTSPD 750



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 13/148 (8%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  SS G+ A++ +QK          L   A   L N   + +   + P     +  +  
Sbjct: 487 PLLSSGGQVAVLELQKPGR-------LPDTALPTLQNGAAV-MDLVWDPFDPHRLAVAGE 538

Query: 323 EGKEQLYVMQSNG-----SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           + + +L+ +   G     +  + +        +   + P    +  +        I  ++
Sbjct: 539 DARIRLWRVPPGGLKNVLTTPETVLTGHTEKIYSLRFHPLAADVLASSSYDLTIRIWDLQ 598

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
               Q RL      + +  WSP G+ L 
Sbjct: 599 AGTEQLRLQGHQDQIFSLAWSPDGKQLA 626


>gi|300798651|ref|NP_001178568.1| coronin-7 [Rattus norvegicus]
 gi|109489610|ref|XP_001077234.1| PREDICTED: coronin 7 [Rattus norvegicus]
          Length = 922

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 80/232 (34%), Gaps = 31/232 (13%)

Query: 184 VVSGIIKNSLCVMDRDG-----ANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDIL 237
           V     +  L  +   G          +     + ++  RF P     +A ++YD    L
Sbjct: 559 VAGEDARIRLWRVPPGGLKNVLTTPETVLTGHTEKIYSLRFHPLAADVLASSSYD----L 614

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + D +      R+   +  I +  +S +GK+   +V KD  + +Y  D +S+    L
Sbjct: 615 TIRIWDLQAGTEQLRLQGHQDQIFSLAWSPDGKQLA-TVCKDGRVRVY--DPRSSPL-PL 670

Query: 298 TNTLFINISA----SYSPDSSQIV---FESDREGKEQLYVMQS-NGSDQKRISQDKEASY 349
            +             +  +   ++   F+S  E + QLY+  +        +  D   S 
Sbjct: 671 QDGPGPEGGRGARIVWVCNGGCLLVSGFDSRSERQLQLYMADALAEGPSALLGLDVAPST 730

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPS 400
             P + P   L+  T     +  +         E +      L+  ++ SP 
Sbjct: 731 LLPSYDPDTGLVLLTGKGDTRVFLY--------EVIPEAPFFLECNSFTSPD 774



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 50/148 (33%), Gaps = 13/148 (8%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  SS G+ A++ +QK          L   A   L N   + +   + P     +  +  
Sbjct: 511 PLLSSGGQVAVLELQKPGR-------LPDTALPTLQNGAAV-MDLVWDPFDPHRLAVAGE 562

Query: 323 EGKEQLYVMQSNG-----SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           + + +L+ +   G     +  + +        +   + P    +  +        I  ++
Sbjct: 563 DARIRLWRVPPGGLKNVLTTPETVLTGHTEKIYSLRFHPLAADVLASSSYDLTIRIWDLQ 622

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLI 405
               Q RL      + +  WSP G+ L 
Sbjct: 623 AGTEQLRLQGHQDQIFSLAWSPDGKQLA 650


>gi|116495288|ref|YP_807022.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lactobacillus
           casei ATCC 334]
 gi|116105438|gb|ABJ70580.1| Dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lactobacillus
           casei ATCC 334]
          Length = 658

 Score = 46.2 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 62/186 (33%), Gaps = 23/186 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-----VYLMDTRIDRAPKRIGNFRSM 259
            L   R+        SP+ Q +A+      D         YL++    +           
Sbjct: 173 RLVMGREHEFEVGAISPDGQTLAFTAERLPDDPNDFSQATYLLNLADQQVTMVNDQLPQA 232

Query: 260 ILAP-RFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISASYSPDS 313
            L+P  FS++GK+ L+    +   +     ++  DL +   + + + +  +I    + D 
Sbjct: 233 ALSPEAFSADGKQLLLVGSDNHLPNVSQSHLWHYDLATKTLQDVADDIDFDIPGHVNGDF 292

Query: 314 SQIVFESDRE----------GKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLI 361
            Q + E   +          G +        G   ++++          D   +P    +
Sbjct: 293 QQDLSEKVADFATADYYLTIGFDHGKTSLYAGGPDEQLTPLIGGRRHVTDYALTPDHHGV 352

Query: 362 AFTKFS 367
            FT+ +
Sbjct: 353 VFTEST 358



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 71/257 (27%), Gaps = 47/257 (18%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S         +C ++  G  I Y    +      P  SP+QQ +A+ +   +   +V+L 
Sbjct: 32  SEADNTYYQRICFVNHRGGTIAYGFDQKH--DRHPLLSPDQQWLAFLSQASDKTTQVFLQ 89

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---------------IYSV 287
                 A +       +     + ++ +   I                         Y +
Sbjct: 90  AVNGGTAKQFSAEKEGVSYF-GWQADSQALFIQTTVGAKPKKTDKQWPQPVTVSRVPYKL 148

Query: 288 DLQS------------NATERLTNTLFINISASY-----SPDSSQIVFESDR------EG 324
           +                   + T+ L +     +     SPD   + F ++R      + 
Sbjct: 149 NGVGLLPEHVAYELRVQRLRQKTSRLVMGREHEFEVGAISPDGQTLAFTAERLPDDPNDF 208

Query: 325 KEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSG-----EKFAIGVMKK 378
            +  Y++         +  Q  +A+     +S  G  +             +  +     
Sbjct: 209 SQATYLLNLADQQVTMVNDQLPQAALSPEAFSADGKQLLLVGSDNHLPNVSQSHLWHYDL 268

Query: 379 DGSQERLLVEDSNLQAP 395
                + + +D +   P
Sbjct: 269 ATKTLQDVADDIDFDIP 285


>gi|323525312|ref|YP_004227465.1| 6-phosphogluconolactonase [Burkholderia sp. CCGE1001]
 gi|323382314|gb|ADX54405.1| 6-phosphogluconolactonase [Burkholderia sp. CCGE1001]
          Length = 438

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 51/335 (15%), Positives = 93/335 (27%), Gaps = 48/335 (14%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDR-------KQIIGKKFFSSPASWRKIAHTIS 159
           G   ++ G       + L V +R +D K          Q +   +       R +     
Sbjct: 74  GVYDMLVGTYTGGKSEGLYV-YR-FDTKTGDATRVSVAQTVNPSYLVVSRDRRFV----- 126

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQ-ILFEP 217
                 + G+ G  + R    +    +   + S L  +  DG +  YL+ S D   L   
Sbjct: 127 -YAVNELPGDNGPASQRGGVSAFRFDAASGQLSFLNKVSADGNDPCYLSLSPDGKYLLVA 185

Query: 218 RFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +S    P           D  +    L        P +     S + +  FS +G    
Sbjct: 186 NYSVAADPGGSFAVLPVQADGQLGASVLTVHHEGGGPVKGRQDNSHVHSTVFSPDGHYLF 245

Query: 274 ISVQKDEAMDIYSV---DLQSNATERLTNTLFINISA-------SYSPDSSQIVFESDRE 323
              Q   A  +YS       S      T+  +             +  D       S+  
Sbjct: 246 --AQDLGADKLYSYRYTPDGSRGLFGPTDWRYTEEKPGTGPRHLVFGADGKHAYLTSELA 303

Query: 324 GKEQLYVMQSNGSDQKRIS--------QDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIG 374
               +           ++            +        SP G  +  T      +  I 
Sbjct: 304 AT--VSTFDYADGKLTQVQTISLTEPGFKGKVGAAAIHLSPDGRFLYATNRGDANEIVIF 361

Query: 375 VMKKDGSQERLL-VEDSNLQAPT-WS--PSGRSLI 405
            +       R +  + S  +AP  ++  P+G+ LI
Sbjct: 362 SVDPANGHLRKIGHQSSLGKAPREFAIDPTGKWLI 396



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 69/198 (34%), Gaps = 43/198 (21%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFE----------- 319
            +  K E + +Y  D ++    R+  ++   ++ SY   S D  + V+            
Sbjct: 83  YTGGKSEGLYVYRFDTKTGDATRV--SVAQTVNPSYLVVSRD-RRFVYAVNELPGDNGPA 139

Query: 320 SDREGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-----GEKFA 372
           S R G        ++G  S   ++S D     +    SP G  +    +S     G  FA
Sbjct: 140 SQRGGVSAFRFDAASGQLSFLNKVSADGNDPCYL-SLSPDGKYLLVANYSVAADPGGSFA 198

Query: 373 --------------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                         + V  + G   +   ++S++ +  +SP G  L F++    D   KL
Sbjct: 199 VLPVQADGQLGASVLTVHHEGGGPVKGRQDNSHVHSTVFSPDGHYL-FAQDLGAD---KL 254

Query: 419 YSIDLNGRNETLINTPAY 436
           YS          +  P  
Sbjct: 255 YSYRYTPDGSRGLFGPTD 272


>gi|239906418|ref|YP_002953159.1| hypothetical protein DMR_17820 [Desulfovibrio magneticus RS-1]
 gi|239796284|dbj|BAH75273.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 354

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 57/190 (30%), Gaps = 11/190 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + +A + YD      V +        P          L   FS +  +  ++ Q
Sbjct: 160 AVSPDGRTLAASHYDG-----VTVYAPPRPGTPGNRLEGAGSNLTVVFSPDNDKMALATQ 214

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE--GKEQLYVMQSNG 335
                 +   DL  +A   L          S+S D   +    +R   G      +    
Sbjct: 215 ---DKSVRVYDLAQSAGYLLEGYPAKVRCLSFSSDGGTLWTGGERAFVGWPVGADVDPAT 271

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            +       +          P   L+A   F G    +G   + G+     +E   +   
Sbjct: 272 REATVFGIFEHGMLGAVAAHPALPLVA-GGFDGGVVFLGSASRQGAAPLFALESHRVTNL 330

Query: 396 TWSPSGRSLI 405
            WSP GR L 
Sbjct: 331 VWSPDGRRLA 340



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 41/250 (16%), Positives = 72/250 (28%), Gaps = 50/250 (20%)

Query: 218 RFSPNQQKVAYATYD-----------------------------------DEDILRVYLM 242
            FSP+ + +AYA  D                                     D  RV L 
Sbjct: 40  SFSPDGETIAYALGDGRLALVEAETGETEFAAPHTGAALCLAASPHGFLTGGDDGRVVLT 99

Query: 243 DTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
                   + +  F    +     S +G+   ++V       +        A   L    
Sbjct: 100 TLETG--CRELAAFPGQWVEHAAASPDGRVLAVAV----GKQVVLFPGPDFAPAPLPELQ 153

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                 + SPD   +   S  +G   +Y     G+   R+  +   S    V+SP  D +
Sbjct: 154 SAVAGLAVSPDGRTLA-ASHYDGVT-VYAPPRPGTPGNRL--EGAGSNLTVVFSPDNDKM 209

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           A          + V     S   LL    + ++  ++S  G +L    ++          
Sbjct: 210 ALATQDKS---VRVYDLAQSAGYLLEGYPAKVRCLSFSSDGGTLWTGGERAFVGWPVGAD 266

Query: 421 IDLNGRNETL 430
           +D   R  T+
Sbjct: 267 VDPATREATV 276



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 69/194 (35%), Gaps = 32/194 (16%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY---- 309
            +F + + A  FS +G+    ++       +  V+ ++      T     +  A+     
Sbjct: 30  ADFGAYVAACSFSPDGETIAYAL---GDGRLALVEAETGE----TEFAAPHTGAALCLAA 82

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SP      F +   G +   V+ +  +  + ++            SP G ++A       
Sbjct: 83  SPHG----FLT--GGDDGRVVLTTLETGCRELAAFPGQWVEHAAASPDGRVLAVAV---G 133

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI---------FSRKKDGDTGSKLYS 420
           K  +     D +   L    S +     SP GR+L          ++  + G  G++L  
Sbjct: 134 KQVVLFPGPDFAPAPLPELQSAVAGLAVSPDGRTLAASHYDGVTVYAPPRPGTPGNRL-- 191

Query: 421 IDLNGRNETLINTP 434
            +  G N T++ +P
Sbjct: 192 -EGAGSNLTVVFSP 204


>gi|260786789|ref|XP_002588439.1| hypothetical protein BRAFLDRAFT_274913 [Branchiostoma floridae]
 gi|229273601|gb|EEN44450.1| hypothetical protein BRAFLDRAFT_274913 [Branchiostoma floridae]
          Length = 592

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 59/178 (33%), Gaps = 16/178 (8%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D IY+  +    D ++  L       S      L  +DR       +     Q +   +F
Sbjct: 378 DVIYKGHSYPVWDIDTSPLGAYFVSCSQDRSARLWALDRTF--PLRIFAGHSQDVDCVKF 435

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALISV 276
            PN   +A  + D      V L   +  +  +        +  I +  FS +GK    S 
Sbjct: 436 HPNCNYIATGSSDR----TVRLWSVQDGKFVRIFHGKDGHKGTIFSLAFSPDGKHLA-SA 490

Query: 277 QKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +D  + ++  DL S    + L        S SYS D + +       G   + V   
Sbjct: 491 GEDNCVRVW--DLTSGDMLKELRAHTDSIYSISYSRDGTMLA---SAGGDSIVRVWDM 543



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 63/180 (35%), Gaps = 19/180 (10%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            D+L   + +  + +  K +      +    F  N    L++  +D  + ++++   +N 
Sbjct: 320 GDVLDDKVREDSVGQEVKHMRGHSGPVYGTSFLPN-NTFLLTSSEDTTVRLWNLSTFTND 378

Query: 294 TERLTNT---LFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASY 349
                ++     I+     SP  +  V  S DR  +    +   + +   RI        
Sbjct: 379 VIYKGHSYPVWDIDT----SPLGAYFVSCSQDRSAR----LWALDRTFPLRIFAGHSQDV 430

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLI 405
               + P  + IA T  S     +  ++ DG   R+          + +  +SP G+ L 
Sbjct: 431 DCVKFHPNCNYIA-TGSSDRTVRLWSVQ-DGKFVRIFHGKDGHKGTIFSLAFSPDGKHLA 488


>gi|194754134|ref|XP_001959352.1| GF12085 [Drosophila ananassae]
 gi|257096273|sp|B3MC74|CIAO1_DROAN RecName: Full=Probable cytosolic iron-sulfur protein assembly
           protein Ciao1
 gi|190620650|gb|EDV36174.1| GF12085 [Drosophila ananassae]
          Length = 335

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 58/175 (33%), Gaps = 15/175 (8%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-FRSMI 260
           N+ +        ++   + P      +A+  ++  +R++ ++         + +  +  I
Sbjct: 5   NLEHTLQGHKGRIWGVAWHPKGN--VFASCGEDKAIRIWSLNGNTWTTKTILSDGHKRTI 62

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIV 317
              R+S  G+    S   D    I+S    S   E    L        S S+S     + 
Sbjct: 63  REIRWSPCGQYLA-SASFDGTTAIWS--KSSGEFECNATLEGHENEVKSVSWSRSGGLLA 119

Query: 318 FESDREGKEQLYVMQSNGSDQ---KRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             S     + +++ +  G D+     +           VW P  +L+A   +   
Sbjct: 120 TCSR---DKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKELLASASYDNT 171



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 16/136 (11%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR---ISQDKEASYFDPVWSP 356
                   ++ P  +  VF S  E K  + +   NG+       +S   + +  +  WSP
Sbjct: 13  HKGRIWGVAWHPKGN--VFASCGEDK-AIRIWSLNGNTWTTKTILSDGHKRTIREIRWSP 69

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQ----ERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            G  +A   F G      +  K   +      L   ++ +++ +WS SG  L    +   
Sbjct: 70  CGQYLASASFDGTT---AIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSR--- 123

Query: 413 DTGSKLYSIDLNGRNE 428
           D    ++ +  +   E
Sbjct: 124 DKSVWIWEVAGDDEFE 139


>gi|84497735|ref|ZP_00996557.1| hypothetical protein JNB_16113 [Janibacter sp. HTCC2649]
 gi|84382623|gb|EAP98505.1| hypothetical protein JNB_16113 [Janibacter sp. HTCC2649]
          Length = 925

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 34/203 (16%), Positives = 72/203 (35%), Gaps = 39/203 (19%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE------- 295
           +  I    +R+       +    S +G+    +   D ++ +   DL +N          
Sbjct: 62  NQLIKPIGQRLLTEYGKFMGSTISPDGRYLA-ATANDRSISLQIFDLSTNKLIFRAGTAA 120

Query: 296 ----RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS--------DQKRISQ 343
               R  +        +YSPD  + +F  +  G  + + + ++G+             + 
Sbjct: 121 GANLRPADNTVGQEGPTYSPDG-RFLFMPNATGITR-FPVNADGTLSAGTKIAIPTLANP 178

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
            ++A      +SP G  + +   +G+   + +    G+    + +  N+     +P  R 
Sbjct: 179 SRQALTAGLTFSPDGKTL-YAAVNGQNSVVAIDPVAGT----ITQTWNVG---IAP--RQ 228

Query: 404 LIFSRKKDGDTGSKLYSIDLNGR 426
           L F        G+KLY  D  GR
Sbjct: 229 LTFV-------GAKLYVSDEGGR 244



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/154 (14%), Positives = 44/154 (28%), Gaps = 33/154 (21%)

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL----------APR 264
                SP+ + +A    D    + + + D   ++   R G      L           P 
Sbjct: 80  MGSTISPDGRYLAATAND--RSISLQIFDLSTNKLIFRAGTAAGANLRPADNTVGQEGPT 137

Query: 265 FSSNGKRAL---------ISVQKDE----AMDIYSVDLQSNATERLTNTLFINISASYSP 311
           +S +G+              V  D        I    L + + + LT  L      ++SP
Sbjct: 138 YSPDGRFLFMPNATGITRFPVNADGTLSAGTKIAIPTLANPSRQALTAGL------TFSP 191

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           D   +    +  G+  +  +        +     
Sbjct: 192 DGKTLYAAVN--GQNSVVAIDPVAGTITQTWNVG 223


>gi|302787469|ref|XP_002975504.1| hypothetical protein SELMODRAFT_267866 [Selaginella moellendorffii]
 gi|300156505|gb|EFJ23133.1| hypothetical protein SELMODRAFT_267866 [Selaginella moellendorffii]
          Length = 872

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 72/229 (31%), Gaps = 34/229 (14%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDE---DILRVYLMDTRIDRAPKRIG----NFRS 258
                   +F   F P+ Q+ A A  D +      R  + +   DR  +++     +   
Sbjct: 8   WLRHEGLQIFSVDFQPSGQRCATAGGDHKVRIWNTRPLMKEGEADRGGEKLLATLCDHFG 67

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIY--------SVDLQSNATER---------LTNTL 301
            +   R+S +G    ++   D ++ +         +V+  S              L    
Sbjct: 68  SVNCVRWSKSG--LYVASGSDGSLVLIHEKRHGTGTVEFGSGEPANVENWKVCASLRGHT 125

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              +  ++SPD S +   S  +   +++ M   G     +     +      W P G  +
Sbjct: 126 ADVVDLAWSPDDSMLATCSL-DNTVRIWKMP--GGSSVAVLTGHSSLVKGVAWDPIGSFL 182

Query: 362 AFTKFSGEKF-----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           A                  + +     R  V  +  +  +WSP G  +I
Sbjct: 183 ASQSDDKTVMIWQTSDWAAVHRAEGPWRKSVGSTFFRRLSWSPCGHFII 231



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 39/109 (35%), Gaps = 13/109 (11%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            +S +      +   D  + I+ +    ++   LT    +    ++ P  S +  +SD +
Sbjct: 132 AWSPDDSMLA-TCSLDNTVRIWKMP-GGSSVAVLTGHSSLVKGVAWDPIGSFLASQSD-D 188

Query: 324 GKEQLY-------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
               ++       V ++ G  +K +       +    WSP G  I  T 
Sbjct: 189 KTVMIWQTSDWAAVHRAEGPWRKSV---GSTFFRRLSWSPCGHFIITTH 234


>gi|297679762|ref|XP_002817690.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 3 subunit B-like [Pongo abelii]
          Length = 820

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 295 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 346

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 347 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 392

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 393 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 450

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 451 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 510

Query: 430 LI 431
            +
Sbjct: 511 RV 512



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 477 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 536

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 537 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 589

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      N    + I    +       WSPQG  +          A+  +     
Sbjct: 590 APRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 649

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 650 TVMNIAEHYMASDVEWDPTGRYVV 673


>gi|298251217|ref|ZP_06975020.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
 gi|297545809|gb|EFH79677.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Ktedonobacter racemifer DSM 44963]
          Length = 614

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 54/363 (14%), Positives = 111/363 (30%), Gaps = 47/363 (12%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
            W+ + A     G V        ++    WDV   +    ++   +P         +S D
Sbjct: 23  SWSQVAAHAPDRGLVASNLSGSYQLHS--WDVSTGEL---RQVSYAPKGV--FIGRLSGD 75

Query: 162 --IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
                 +  E GD   R + V  +                G   + LTP       +P  
Sbjct: 76  GHFIYYLHDEDGDEMGRFVRVPFT----------------GGKPQELTPEFPPYFADPYL 119

Query: 220 SPNQQKVAYATYDDE--DILRVYLMDTRIDRAPKRIGNFR----SMILAPRFSSNGKRAL 273
           +P    + +     E  D+  V L       AP+ + +              SS G  A+
Sbjct: 120 NPTGTMLGFLVGKPEGVDLYVVPLGPNDGVGAPRWVFHNPVPGLLGRRLLALSSAGTTAI 179

Query: 274 ISVQKDEAMDIY----SVDLQSNA-TERLTNTLFINIS-ASYSP--DSSQIVFESDREGK 325
           + + K      Y    ++DL +    ++L      +++   YSP     ++     R   
Sbjct: 180 M-ISKPHNPSTYEGLLAIDLATGECIDQLQAEPGTSVALGDYSPVSGDERLWATIQRGDT 238

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            Q  +      ++  +            WS  G  +   +         +        ++
Sbjct: 239 RQHLIWNPRTGERLSLDLSGLMGASPCSWSSDGTRLLLWQEDQGHKRFAIFTLAEQSIQV 298

Query: 386 LVEDSNLQAPTWSPSGRSLI--FSRKKDGD-TGSKLYSIDLNGRNET---LINTPAYASD 439
           L E       ++  +   +   +   +DG   G ++ S+D    ++    ++  P  +  
Sbjct: 299 LSELHGTYWSSYFGNTGEIYTHWGMIQDGSVVGPEIVSLDAISGSQRHPLVVLDPVPSGR 358

Query: 440 PQW 442
           P W
Sbjct: 359 P-W 360



 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 49/139 (35%), Gaps = 6/139 (4%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             R  +  +      S + A     +  R L++     +  ++S D+ +    +++    
Sbjct: 10  QARWKQRFRAPTLSWSQVAAHA--PD--RGLVASNLSGSYQLHSWDVSTGELRQVSYAPK 65

Query: 303 INISASYSPDSSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                  S D   I +  D +G E  +   +   G   + ++ +    + DP  +P G +
Sbjct: 66  GVFIGRLSGDGHFIYYLHDEDGDEMGRFVRVPFTGGKPQELTPEFPPYFADPYLNPTGTM 125

Query: 361 IAFTKFSGEKFAIGVMKKD 379
           + F     E   + V+   
Sbjct: 126 LGFLVGKPEGVDLYVVPLG 144


>gi|303319599|ref|XP_003069799.1| periodic tryptophan protein 2, putative [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240109485|gb|EER27654.1| periodic tryptophan protein 2, putative [Coccidioides posadasii
           C735 delta SOWgp]
          Length = 909

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/223 (13%), Positives = 80/223 (35%), Gaps = 14/223 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N  +L       +     + + + +A+ +     +L V+   +      K+ G+  SM 
Sbjct: 286 FNQLHLLSVSQSNIDYVTVNNSGEWLAFGSAKLGQLL-VWEWQSE-SYILKQQGHLNSMN 343

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S +G++  I+   D  + ++ ++         T       +  ++   + ++F +
Sbjct: 344 SL-VYSPDGQKI-ITAADDGKIKVWDIN-SGFCVVTFTEHTAAVTACEFTKRGN-VLFTA 399

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G  + + +     + +  +      +      P G+++         F I V     
Sbjct: 400 SLDGSVRAWDL-IRYRNFRTFTAPSRQQFSSLAVDPSGEVVCAGSLD--SFDIHVWSVQT 456

Query: 381 SQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            Q   RL   +  + + +++  G  L+       D   +L++I
Sbjct: 457 GQLLDRLAGHEGPVSSLSFAADGSHLV---SGSWDRTVRLWNI 496


>gi|256085885|ref|XP_002579141.1| hypothetical protein [Schistosoma mansoni]
 gi|238664551|emb|CAZ35380.1| WD-repeat protein, putative [Schistosoma mansoni]
          Length = 422

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 41/249 (16%), Positives = 79/249 (31%), Gaps = 43/249 (17%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGII 189
           LWDV+   ++      ++      IA   S              N R++       +G  
Sbjct: 203 LWDVETGSELASLNGHTAEV----IALQFS------------QCNGRLML------TGSF 240

Query: 190 KNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            +++C+ D R G    +L       +    F+ +   VA A+ D      V + DTR  R
Sbjct: 241 DHTVCLWDVRTGERTHHLI-GHAAEVSAASFTYDTCLVATASMDK----TVRVWDTRTGR 295

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFINIS 306
               +   +  +L   F  +G+R   S   D    +++V +       + L+  +     
Sbjct: 296 QLHLLTGHQDEVLDVTFDPSGRRLA-SASADGTARVWNVGISGETKGAKFLSTLIGHEGE 354

Query: 307 ASYSPDSSQIVFES------DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            S      ++ F S           +   +      + K I        F   ++ + D 
Sbjct: 355 VS------KVCFNSPGNLVLTASSDKTARLWDVETGELKDILSGHTDEVFSCAFNYESDT 408

Query: 361 IAFTKFSGE 369
           I        
Sbjct: 409 IITGSKDNT 417


>gi|163740601|ref|ZP_02147995.1| WD domain/cytochrome c family protein [Phaeobacter gallaeciensis
           2.10]
 gi|161386459|gb|EDQ10834.1| WD domain/cytochrome c family protein [Phaeobacter gallaeciensis
           2.10]
          Length = 440

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 50/330 (15%), Positives = 100/330 (30%), Gaps = 65/330 (19%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            H  +D+ + ++ G  G   +  +     V +G   N++ +             + +  +
Sbjct: 27  GHADADE-FTTLKGHGGPVMALAVSPEGQVATGSFDNAIGLWRD---RSPRWLEAHEAAV 82

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               F    + V        D   +YL     +   + IG     I A   + + +  L+
Sbjct: 83  TALAFMDAGRLV-----SAGDDFALYLWPQGSNT-GELIGRHLGKIRALAMTPD-RNTLV 135

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S   D  + ++   L   + +R+     +N  A    D    V+ +   G  Q+ V +  
Sbjct: 136 SGSWDGEIGLW--PLGDGSEQRIKVGSGVNDVAV-GADG--AVYAATMSG--QILVYEDA 188

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI--------------------- 373
               +R+           V  P GD +A+    G    +                     
Sbjct: 189 DRSPRRLVDQGFG-INQLVLGPDGDWLAYGAVDGATRVVDSQTGDPVADFTLERRPILAM 247

Query: 374 ----------------GVMKKDGSQERL-----LVEDSNLQAPTWSPSGRSLIFSRKKDG 412
                            +M  D    R+        D  + A  ++P GR++  +   D 
Sbjct: 248 AYHEGTARLAVGDGQGYIMMVDTETWRISADFRATRDGPVWALEFAPDGRTVWAAGLDDL 307

Query: 413 DTGSKLYSIDLNGRNETLINTP-AYASDPQ 441
             G   + + L G  E  +     +  DP 
Sbjct: 308 AYG---WPVALMGETEAQMAGNRGFLKDPA 334


>gi|170579174|ref|XP_001894711.1| WD-repeat protein HUSSY-07 [Brugia malayi]
 gi|158598579|gb|EDP36446.1| WD-repeat protein HUSSY-07, putative [Brugia malayi]
          Length = 482

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/190 (15%), Positives = 65/190 (34%), Gaps = 14/190 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P   + +   +FSPN +++A  + D      V   D   +          + +L   +S
Sbjct: 110 LPGHGEPVISVQFSPNGRELASGSGDA----TVRFWDLNTETPLHTAKGHTNWVLCIAWS 165

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFE--SDR 322
            +GK+   S  K+  + ++  D ++     +++T+         + P          +  
Sbjct: 166 PDGKKLA-SACKNGHICLW--DPKTGMQIGKKMTSHKQWINQLVWEPYHRNPYCRHLASA 222

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               ++ +  +   +  R      AS     W   G  + +T        +    +DG  
Sbjct: 223 GKDGEVRIWDTMKCEMVRCLTGHTASVTCVKW--GGQGLIYTGSQDRTIKVWR-SEDGIL 279

Query: 383 ERLLVEDSNL 392
            R LV  ++ 
Sbjct: 280 CRTLVGHAHW 289



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/94 (15%), Positives = 28/94 (29%), Gaps = 10/94 (10%)

Query: 292 NATERLTNTLFINISAS----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
               R T++L  +        +SP+  ++   S   G   +     N       ++    
Sbjct: 101 RPVTRCTSSLPGHGEPVISVQFSPNGRELASGS---GDATVRFWDLNTETPLHTAKGHTN 157

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                 WSP G  +A    +G    I +      
Sbjct: 158 WVLCIAWSPDGKKLASACKNG---HICLWDPKTG 188



 Score = 39.6 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 42/135 (31%), Gaps = 4/135 (2%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
             L+S   D  +  +    +     R+T    +     +SP++  I   S     + + +
Sbjct: 339 ELLVSGSDDFTLFFWKPTDEKKPRMRMTGHQQLVNQVMFSPNARYIASASF---DKSIKL 395

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                       +    + +   WS    L+  +  +     +  M K G    L     
Sbjct: 396 WCGRTGTFLDTLRGHVQAVYQIAWSADSRLLV-SGSADSTLKVWDMHKRGLCMDLPGHGD 454

Query: 391 NLQAPTWSPSGRSLI 405
            + A  WSP G  + 
Sbjct: 455 EVYAVDWSPDGTRVA 469


>gi|146342306|ref|YP_001207354.1| hypothetical protein BRADO5461 [Bradyrhizobium sp. ORS278]
 gi|146195112|emb|CAL79137.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
          Length = 159

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 37/119 (31%), Gaps = 19/119 (15%)

Query: 42  SANYSPVSIAFTKF-------VSIDELGGK--------VSEVVSKDLQRSDVFNLISQDS 86
           SA+  P  +A   F           +   +         +E +   LQ S  F ++   +
Sbjct: 5   SAHAEPPKVAVFDFELIDTSLQGEVQGPRQDEQQRLAHAAEQLRAALQESGKFRVLDIAA 64

Query: 87  FKQKITNPDSIP----RFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG 141
                 + +         +    +GA + +TG V K     L +   L D    K +  
Sbjct: 65  VNDAAHHSNLQACGGCDIKLAADIGADLAITGTVQKVSNLILNMNIYLRDAHTGKPVAA 123


>gi|332295178|ref|YP_004437101.1| WD40 repeat-containing protein [Thermodesulfobium narugense DSM
           14796]
 gi|332178281|gb|AEE13970.1| WD40 repeat-containing protein [Thermodesulfobium narugense DSM
           14796]
          Length = 617

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 51/280 (18%), Positives = 101/280 (36%), Gaps = 33/280 (11%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            I   +        G+ +S I +      +G +K  L     D  NI     S ++    
Sbjct: 268 KICGQLVNLTFSNNGNLSSLITY-----KNGFLKIWLPASKIDRLNISISFKSDERD--- 319

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA------------PR 264
             FS N   ++ A++ +++      +  R +    +   +  M +               
Sbjct: 320 -SFSHNGYFLSSASFTEKNEAVCLFVKPRWESKLVKFDLYNKMNITYENTLKESLIIFST 378

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDRE 323
            S N K         +   I  ++ QSN+T +        ++  ++SPD   +V  S+  
Sbjct: 379 LSFNSKLLA---TLKDKNKIKIINTQSNSTIQEFAIKDDQVNTFTFSPDLRYLVIGSNTL 435

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               +       S    ++ D+         SP  +LIAFT+   +   + ++  D  + 
Sbjct: 436 KLWSIDKQSFVKSVSPELTVDR------VAVSPNSELIAFTQRINDNLILKIIDIDSKEI 489

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            R L   +++ +  +SP+ + L F      D   + YSID
Sbjct: 490 KRKLEGLNHINSLLFSPNSKFL-FVGSTKKDPTIRAYSID 528


>gi|329938398|ref|ZP_08287823.1| repetative protein [Streptomyces griseoaurantiacus M045]
 gi|329302371|gb|EGG46262.1| repetative protein [Streptomyces griseoaurantiacus M045]
          Length = 640

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 75/217 (34%), Gaps = 34/217 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG--NFRSMILAPRFSSNGKRALIS 275
            F P+  ++A ++YD      V + D     AP+ +   + R ++ A R++      L +
Sbjct: 2   SFRPDGSRLATSSYDG----TVLVWDVSGPAAPRPLTRLHHRRLVNAVRWNPVHPDLLAT 57

Query: 276 VQKDEAMDIYSVD----LQSNA----------------TERLTNTLFINISASYSPDSSQ 315
              D+ + ++ +     L S                     L        + ++ PD  +
Sbjct: 58  ASADKTVAVWRIPDAPRLPSGPDGSGAEDTAGASAPVLLTVLARHTDDVNAVAWMPDGHR 117

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           ++  S+ +G+  L+   +        +    A       S QG         GE   I V
Sbjct: 118 LICVSE-DGRATLW--DTRTGAFAGEAGTHAAHCMMVSVSAQG----LVATVGEDGMIAV 170

Query: 376 MKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKD 411
              D     +     ++++   WS SG +L  +R   
Sbjct: 171 GDPDRPGHTVRRHCPASVEGCAWSHSGTTLAITRDDG 207


>gi|320040727|gb|EFW22660.1| WD repeat protein [Coccidioides posadasii str. Silveira]
          Length = 909

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/223 (13%), Positives = 80/223 (35%), Gaps = 14/223 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N  +L       +     + + + +A+ +     +L V+   +      K+ G+  SM 
Sbjct: 286 FNQLHLLSVSQSNIDYVTVNNSGEWLAFGSAKLGQLL-VWEWQSE-SYILKQQGHLNSMN 343

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S +G++  I+   D  + ++ ++         T       +  ++   + ++F +
Sbjct: 344 SL-VYSPDGQKI-ITAADDGKIKVWDIN-SGFCVVTFTEHTAAVTACEFTKRGN-VLFTA 399

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G  + + +     + +  +      +      P G+++         F I V     
Sbjct: 400 SLDGSVRAWDL-IRYRNFRTFTAPSRQQFSSLAVDPSGEVVCAGSLD--SFDIHVWSVQT 456

Query: 381 SQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            Q   RL   +  + + +++  G  L+       D   +L++I
Sbjct: 457 GQLLDRLAGHEGPVSSLSFAADGSHLV---SGSWDRTVRLWNI 496


>gi|308501351|ref|XP_003112860.1| CRE-SWD-3.1 protein [Caenorhabditis remanei]
 gi|308265161|gb|EFP09114.1| CRE-SWD-3.1 protein [Caenorhabditis remanei]
          Length = 376

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/262 (14%), Positives = 92/262 (35%), Gaps = 25/262 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +     ++ + +                + +  ++ + + +  A+ D      + + D 
Sbjct: 103 GTSSADKTVKIWNMTEMTCERTLAGHKLGVNDFAWTADSKSIVSASDDK----TLKIFDV 158

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFI 303
              R  K +    + +    F+      ++S   DE++ I+  D+++    + L      
Sbjct: 159 AAARMTKTLKGHNNYVFCCNFNPQ-SSLVVSGSFDESVRIW--DVKTGMCIKTLPAHSDP 215

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             + S++ D S I   S  +G  +++   +NG   K +  D+        +SP G  I  
Sbjct: 216 VSAVSFNRDGSLIASGSY-DGLVRIWDT-ANGQCIKTLVDDENPPVAFVKFSPNGKYILA 273

Query: 364 TKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAPTWSPS----GRSLIFSRKKDGDTGSKL 418
           +        + +     G   +      N +   ++      G+ +I      G    KL
Sbjct: 274 SNLDST---LKLWDFTKGKTLKQYTGHENSKYCIFANFSVTGGKWII-----SGSEDCKL 325

Query: 419 YSIDLNGRNETLINTPAYASDP 440
           Y  +L  + + ++ T    ++P
Sbjct: 326 YVWNL--QTKEVVQTLEGHTEP 345



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 31/203 (15%), Positives = 74/203 (36%), Gaps = 15/203 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +   +FSP  + +  ++ D      V + +       + +   +  +    +
Sbjct: 82  TMKGHTKSISSVKFSPCGKYLGTSSADK----TVKIWNMTEMTCERTLAGHKLGVNDFAW 137

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           +++ K  + S   D+ + I+ V   +  T+ L          +++P SS +V  S     
Sbjct: 138 TADSKSIV-SASDDKTLKIFDV-AAARMTKTLKGHNNYVFCCNFNPQSSLVVSGSF---D 192

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ER 384
           E + +         +             ++  G LIA   + G    + +      Q  +
Sbjct: 193 ESVRIWDVKTGMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDG---LVRIWDTANGQCIK 249

Query: 385 LLVEDSN--LQAPTWSPSGRSLI 405
            LV+D N  +    +SP+G+ ++
Sbjct: 250 TLVDDENPPVAFVKFSPNGKYIL 272


>gi|291385520|ref|XP_002709401.1| PREDICTED: WD repeat-containing protein 1 isoform 2 [Oryctolagus
           cuniculus]
          Length = 467

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 11/86 (12%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWS 398
           D         +SP G+  A     G    I +      ++          D  + A +WS
Sbjct: 48  DHSRFVNCVRFSPDGNRFATASADG---QIYIYDGKTGEKVCALGEGKAHDGGIYAISWS 104

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLN 424
           P    L+      GD  SK++ +++N
Sbjct: 105 PDSTHLL---SASGDKTSKIWDVNVN 127



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 8/77 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRALI 274
           RFSP+  + A A+ D     ++Y+ D +       +G  +     I A  +S +    L 
Sbjct: 57  RFSPDGNRFATASADG----QIYIYDGKTGEKVCALGEGKAHDGGIYAISWSPDSTHLL- 111

Query: 275 SVQKDEAMDIYSVDLQS 291
           S   D+   I+ V++ S
Sbjct: 112 SASGDKTSKIWDVNVNS 128



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 54/179 (30%), Gaps = 28/179 (15%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINIS--- 306
           + I +    +   RFS +G R   +   D    IY  D ++      L      +     
Sbjct: 44  RNIDDHSRFVNCVRFSPDGNRFA-TASADG--QIYIYDGKTGEKVCALGEGKAHDGGIYA 100

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA---SYFDPVWSPQ------ 357
            S+SPDS+ ++  S   G +   +   N +                   +W         
Sbjct: 101 ISWSPDSTHLLSAS---GDKTSKIWDVNVNSVVSTFPMGSNVLDQQLGCLWQKDHLLSIS 157

Query: 358 -GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
               I +   +     + V+K      + L    N         G+S I+S   DG   
Sbjct: 158 LSGYINYLDKNNPSKPLRVIKGHSKSIQCLTVHKNG--------GKSYIYSGSHDGHIN 208


>gi|148257204|ref|YP_001241789.1| hypothetical protein BBta_5944 [Bradyrhizobium sp. BTAi1]
 gi|146409377|gb|ABQ37883.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 171

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/146 (15%), Positives = 41/146 (28%), Gaps = 30/146 (20%)

Query: 15  INLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKF-------VSIDELG----- 62
           + L  +L  +      S+HA            P  +A   F           +       
Sbjct: 1   MKLAFVLASLLLISAASVHAE-----------PPKVAVFDFELIDSSLQGEVQGPRQDEQ 49

Query: 63  ---GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIP----RFQDWNSLGAQVLVTGR 115
               +  E +   L+ S  F ++          + +         +    LGA + +TG 
Sbjct: 50  RRLAQAGEQLRAALRDSGQFRVLDIGPVNDAAHHSNLQACGGCDVKLAADLGADLAMTGT 109

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIG 141
           V K     L +   L D    + +  
Sbjct: 110 VQKVSNLILNMNIYLRDAHTGQPVAA 135


>gi|300927237|ref|ZP_07142969.1| peptidase, S54 family protein [Escherichia coli MS 182-1]
 gi|301329188|ref|ZP_07222179.1| peptidase, S54 family protein [Escherichia coli MS 78-1]
 gi|300416803|gb|EFK00114.1| peptidase, S54 family protein [Escherichia coli MS 182-1]
 gi|300844476|gb|EFK72236.1| peptidase, S54 family protein [Escherichia coli MS 78-1]
          Length = 625

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 37/257 (14%), Positives = 84/257 (32%), Gaps = 32/257 (12%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T       F    S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSFI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS- 310
              + +        S + +  L+        +I  ++  ++  E   +    +     S 
Sbjct: 440 TGTSGKPGAWVMALSPDERTLLVPGA--GRGNIVRINTITHQKE---DFPAGDARGVVSA 494

Query: 311 ----PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
               P + +++F  D +G  ++ V     S   +      + Y     SP G  +A   +
Sbjct: 495 MGFRPKNGEVIFA-DSQGISRISVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSY 551

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             + + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D    
Sbjct: 552 GLQGYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT-- 602

Query: 427 NETLINTPAYASDPQWV 443
               ++  A    PQ+ 
Sbjct: 603 --RSLDPQAIIRHPQYG 617


>gi|259645320|sp|A7UKV4|DPP5_TRIEQ RecName: Full=Dipeptidyl-peptidase 5; AltName:
           Full=Dipeptidyl-peptidase V; Short=DPP V; Short=DppV;
           Flags: Precursor
 gi|156122954|gb|ABU50379.1| dipeptidylpeptidase 5 [Trichophyton equinum]
 gi|326479282|gb|EGE03292.1| dipeptidyl-peptidase [Trichophyton equinum CBS 127.97]
          Length = 726

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 74/237 (31%), Gaps = 37/237 (15%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           S  IY S+      +++ +     +V SG +  S      DG     + P +      P 
Sbjct: 166 SARIYDSLFVRH--WDTYVGTQFNAVFSGALTKSGDKYSFDGKLKNLVHPVKYAESPYPP 223

Query: 219 F--------SPNQQKVAYAT---------------YDDEDILRVYLMDTRIDRAPKRIGN 255
           F        S + + VA+ +               +                  P+    
Sbjct: 224 FGGSGDYDLSSDGKTVAFMSKAPELPKANLTTTYIFVVPHDGSRVAEPINKRNGPRTPQA 283

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISAS-- 308
                 +P FS +GKR        +  +     I+  ++ SN   +   +   + S    
Sbjct: 284 IEGASSSPVFSPDGKRIAYLQMATKNYESDRRVIHIAEVGSNKPVQRIASN-WDRSPEVV 342

Query: 309 -YSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLI 361
            +S D   +   ++     +L+ + ++  D      +  D   S F  V S +  LI
Sbjct: 343 KWSSDGRTLYVTAEDHATGKLFTLPADARDSHKPAVVKHDGSVSSFYFVGSSKSVLI 399



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 73/203 (35%), Gaps = 29/203 (14%)

Query: 265 FSSNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTL----------FINISA 307
            SS+GK      +  E          I+ V    +      N              + S 
Sbjct: 232 LSSDGKTVAFMSKAPELPKANLTTTYIFVVPHDGSRVAEPINKRNGPRTPQAIEGASSSP 291

Query: 308 SYSPDSSQIVF----ESDREGKEQLYVMQSNGSD--QKRISQDKEASYFDPVWSPQGDLI 361
            +SPD  +I +      + E   ++  +   GS+   +RI+ + + S     WS  G  +
Sbjct: 292 VFSPDGKRIAYLQMATKNYESDRRVIHIAEVGSNKPVQRIASNWDRSPEVVKWSSDGRTL 351

Query: 362 AFT---KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             T     +G+ F +    +D  +  ++  D ++ +  +  S +S++ S        + L
Sbjct: 352 YVTAEDHATGKLFTLPADARDSHKPAVVKHDGSVSSFYFVGSSKSVLISGNS--LWSNAL 409

Query: 419 YSIDLNGRNETLINTPAYASDPQ 441
           + +   GR    +   A   DP+
Sbjct: 410 FQVATPGRPNRKLFY-ANEHDPE 431



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/278 (11%), Positives = 78/278 (28%), Gaps = 54/278 (19%)

Query: 211 DQILFEPRFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           D  + E  +  +  K+ Y   T   +  + +++ D +      + G+        + + +
Sbjct: 77  DSDISEITWLGDGTKIVYVNGTDSVKGGVGIWISDAKNFGNAYKAGSVNGAFSGLKLAKS 136

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT-------------ERLTNTLFINISASYS----P 311
           G +                +  +                      +    +A +S     
Sbjct: 137 GDKINFVGYGQSTTKGDLYNEAAAKEAVSSARIYDSLFVRHWDTYVGTQFNAVFSGALTK 196

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              +  F    +GK +  V     ++           Y     S  G  +AF   + E  
Sbjct: 197 SGDKYSF----DGKLKNLVHPVKYAESPYPPFGGSGDY---DLSSDGKTVAFMSKAPELP 249

Query: 372 A-------IGVMKKDGSQERLLVE-----------DSNLQAPTWSPSGRSLIFSR----- 408
                   I V+  DGS+    +            +    +P +SP G+ + + +     
Sbjct: 250 KANLTTTYIFVVPHDGSRVAEPINKRNGPRTPQAIEGASSSPVFSPDGKRIAYLQMATKN 309

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDP---QWV 443
            +       +  +  N   + + +   +   P   +W 
Sbjct: 310 YESDRRVIHIAEVGSNKPVQRIASN--WDRSPEVVKWS 345


>gi|297817004|ref|XP_002876385.1| hypothetical protein ARALYDRAFT_486131 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322223|gb|EFH52644.1| hypothetical protein ARALYDRAFT_486131 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 447

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 57/196 (29%), Gaps = 19/196 (9%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            I A  +S  G+    +     +  I+  D+   A   +   L       +SP      F
Sbjct: 214 QISALSWSPCGRYLASASYDSSSFTIW--DVSQGAGTPIRRGLGGISMLKWSPTGDYF-F 270

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT------------KF 366
            +  +G   L+   +  S+   +S     S    +W P+G  I  +              
Sbjct: 271 AARFDGTFCLWETNTWTSEPWSLSS-GSGSVTGAIWDPEGRFILISFSKSSTLGSVHFSS 329

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK--LYSIDLN 424
                   ++  +  +   L     ++   W  SG  L     K GD   K  +   D  
Sbjct: 330 KPPSLDAHLLPVELPEIASLTGSEGIEKIAWDASGERLA-VSYKGGDENYKGLIAIYDTR 388

Query: 425 GRNETLINTPAYASDP 440
                  +   +   P
Sbjct: 389 RTPIVSASLVGFIRGP 404



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 60/200 (30%), Gaps = 42/200 (21%)

Query: 269 GKRA-LISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREG-- 324
           GK         ++       D        LT+    ++ A  + P+  + +  S R G  
Sbjct: 110 GKHIIAFISGANQVTIRDYDDKDEKEPCVLTSDSQRSVKALEWRPNGGKSLSISCRGGIC 169

Query: 325 ------KEQLYVMQSNGSDQKRISQDKEASYF---------------DPVWSPQGDLIAF 363
                    + +++S GS  +        + +                  WSP G  +A 
Sbjct: 170 IWAASYPGNMALVRSGGSALRGSLSRGSGTRWILVDFLRCQNDEQISALSWSPCGRYLAS 229

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +    F I  +   G+   +      +    WSP+G    F+ + DG           
Sbjct: 230 ASYDSSSFTIWDVS-QGAGTPIRRGLGGISMLKWSPTGDYF-FAARFDGTFC-------- 279

Query: 424 NGRNETLINTPAYASDPQWV 443
                 L  T  + S+P W 
Sbjct: 280 ------LWETNTWTSEP-WS 292


>gi|294627473|ref|ZP_06706056.1| aminopeptidase precursor [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598104|gb|EFF42258.1| aminopeptidase precursor [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 558

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 52/140 (37%), Gaps = 10/140 (7%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKF 366
           S SPD   + + +  EG   ++V   +  DQ R I++D      +  W+ Q + + + + 
Sbjct: 51  SISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPNTLLYLRD 110

Query: 367 SGE--KFAIGVMKKDGSQERLLVEDSNLQAPTW-----SPSGRSLIFSRKKDGDTGSKLY 419
           +G    F +  +  +    + L       A  +      P   S++            LY
Sbjct: 111 NGGDEDFHLFSVNLNDGSSKDLTPFKKTNAEVYRVSAQHP--ESIMVGMNDRDAKWHDLY 168

Query: 420 SIDLNGRNETLINTPAYASD 439
            +DL     TL+     + D
Sbjct: 169 RVDLASGKRTLVQKNTDSLD 188



 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 61/171 (35%), Gaps = 13/171 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLF---INISASYSPDSSQIVFE 319
             S +GK        +  ++++   + + +    +T        N   +Y P+   +++ 
Sbjct: 51  SISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPN--TLLYL 108

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIG 374
            D  G E   L+ +  N    K ++  K+ +      S   P+  ++       +   + 
Sbjct: 109 RDNGGDEDFHLFSVNLNDGSSKDLTPFKKTNAEVYRVSAQHPESIMVGMNDRDAKWHDLY 168

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSIDLN 424
            +     + R LV+ +      +   G   L ++ +   D G +L   D N
Sbjct: 169 RVDLASGK-RTLVQKNTDSLDAYLLDGDYQLRYATRATDDAGRELLVPDGN 218



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 8/94 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDS----NLQAPTWSP 399
                 +   SP G  +++         + V   D   Q R + +D+         T+ P
Sbjct: 43  GNPERANVSISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQP 102

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
           +  +L++ R   GD    L+S++L +G ++ L  
Sbjct: 103 N--TLLYLRDNGGDEDFHLFSVNLNDGSSKDLTP 134


>gi|302539065|ref|ZP_07291407.1| WD-40 repeat-containing protein [Streptomyces sp. C]
 gi|302447960|gb|EFL19776.1| WD-40 repeat-containing protein [Streptomyces sp. C]
          Length = 533

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 83/257 (32%), Gaps = 20/257 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            S ++G    ++ + D DG        S +        S +   +A       D+L + +
Sbjct: 82  RSALTGGEDGAMTLWDLDGGTATARWRSYEDANGL-AVSADGG-LAVCAT---DVLPLTV 136

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            + R   A + +      +     + +G    +S   D  + ++ V         L    
Sbjct: 137 WEPRTGEA-RLLSGHTEAVRCVALTPDGT-VAVSGSADHRVILWDV-AAGEFVRSLEAHN 193

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               + + S D    V  S     +   ++   G+         E++      +P     
Sbjct: 194 HTVDAVAISDDGRLAVSGSQ----DASSIVWDTGTGAVLRRFGHESAVLAIALAPDARTA 249

Query: 362 AFTKFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           A     G    + + + D GS+  L+   + ++   +SP GR   F+   D      ++ 
Sbjct: 250 AVGTADGT---VSLCRPDDGSRSVLVGHTAGVRTLAFSPDGR---FAVSGDDHGAVLVWD 303

Query: 421 IDLNGRNETLINTPAYA 437
           +   G+        A A
Sbjct: 304 V-ATGQVVREFGDGAGA 319


>gi|227534690|ref|ZP_03964739.1| S9 family peptidase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227187446|gb|EEI67513.1| S9 family peptidase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 658

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 62/186 (33%), Gaps = 23/186 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-----VYLMDTRIDRAPKRIGNFRSM 259
            L   R+        SP+ Q +A+      D         YL++    +           
Sbjct: 173 RLVMGREHEFEVGAISPDGQTLAFTAERLPDDPNDFSQATYLLNLADQQVTMVNDQLPQA 232

Query: 260 ILAP-RFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISASYSPDS 313
            L+P  FS++GK+ L+    +   +     ++  DL +   + + + +  +I    + D 
Sbjct: 233 ALSPEAFSADGKQLLLVGSDNHLPNVSQSHLWHYDLATKTLQDVADDIDFDIPGHVNGDF 292

Query: 314 SQIVFESDRE----------GKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLI 361
            Q + E   +          G +        G   ++++          D   +P    +
Sbjct: 293 QQDLSEKVADFATADYYLTIGFDHGKTSLYAGGPDEQLTPLIGGRRHVTDYALTPDHHGV 352

Query: 362 AFTKFS 367
            FT+ +
Sbjct: 353 VFTEST 358



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 71/257 (27%), Gaps = 47/257 (18%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S         +C ++  G  I Y    +      P  SP+QQ +A+ +   +   +V+L 
Sbjct: 32  SEADNTYYQRICFVNHRGGTIAYGFDQKH--DRHPLLSPDQQWLAFLSQASDKTTQVFLQ 89

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---------------IYSV 287
                 A +       +     + ++ +   I                         Y +
Sbjct: 90  AVNGGTAKQFSAEKEGVSYF-GWQADSQALFIQTTVGAKPKKTDKQWPQPVTVSRVPYKL 148

Query: 288 DLQS------------NATERLTNTLFINISASY-----SPDSSQIVFESDR------EG 324
           +                   + T+ L +     +     SPD   + F ++R      + 
Sbjct: 149 NGVGLLPEHVAYELRVQRLRQKTSRLVMGREHEFEVGAISPDGQTLAFTAERLPDDPNDF 208

Query: 325 KEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSG-----EKFAIGVMKK 378
            +  Y++         +  Q  +A+     +S  G  +             +  +     
Sbjct: 209 SQATYLLNLADQQVTMVNDQLPQAALSPEAFSADGKQLLLVGSDNHLPNVSQSHLWHYDL 268

Query: 379 DGSQERLLVEDSNLQAP 395
                + + +D +   P
Sbjct: 269 ATKTLQDVADDIDFDIP 285


>gi|224013550|ref|XP_002296439.1| hypothetical protein THAPSDRAFT_8775 [Thalassiosira pseudonana
           CCMP1335]
 gi|220968791|gb|EED87135.1| hypothetical protein THAPSDRAFT_8775 [Thalassiosira pseudonana
           CCMP1335]
          Length = 715

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 39/97 (40%), Gaps = 10/97 (10%)

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKK------DGSQERLLVEDS 390
            + I      +   P+ SP G  +A+   S      I +         D  ++R++  + 
Sbjct: 63  PREILFGNPEN-TSPILSPDGKNLAYLAPSPNGVMNIFIRNLLANGEGDKGKDRMITNEP 121

Query: 391 N--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              +++  W+    +++F    DGD    L+++D  G
Sbjct: 122 KRAIRSVAWAYDSETILFMNDFDGDENFHLFAVDALG 158



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 34/112 (30%), Gaps = 14/112 (12%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQS------NGSDQKRISQDKE 346
              +      N S   SPD   + + +    G   +++         +    + I+ + +
Sbjct: 63  PREILFGNPENTSPILSPDGKNLAYLAPSPNGVMNIFIRNLLANGEGDKGKDRMITNEPK 122

Query: 347 ASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
            +     W+   + I F       E F +  +   G       +D  +  P 
Sbjct: 123 RAIRSVAWAYDSETILFMNDFDGDENFHLFAVDALGDD-----DDGTIPTPR 169



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 17/124 (13%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI-SVQK 278
           +P+     + +   +         T  +  P+ I        +P  S +GK     +   
Sbjct: 40  APDAHIRTFPSLFSKR-------TTSEELIPREILFGNPENTSPILSPDGKNLAYLAPSP 92

Query: 279 DEAMDIYSVDL------QSNATERLTNTL--FINISASYSPDSSQIVFESDREGKEQLYV 330
           +  M+I+  +L             +TN     I  S +++ DS  I+F +D +G E  ++
Sbjct: 93  NGVMNIFIRNLLANGEGDKGKDRMITNEPKRAI-RSVAWAYDSETILFMNDFDGDENFHL 151

Query: 331 MQSN 334
              +
Sbjct: 152 FAVD 155


>gi|242786146|ref|XP_002480746.1| meiotic recombination protein Ski8/Rec14, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218720893|gb|EED20312.1| meiotic recombination protein Ski8/Rec14, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 409

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 39/111 (35%), Gaps = 9/111 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + +A           +Y+ +    R P  +      +    FS  GK         
Sbjct: 256 SIDGKYIA----SGHQNGSIYMFNNETGRMPFSLSGLVKPVRTVAFSPGGKLLA---AAG 308

Query: 280 EAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +A  I   D +S     +LT      +S  +S     ++  S  +GK +++
Sbjct: 309 DAKVIVLYDTESGEQVTQLTGHSAWILSLDWSHTGEYLLSGSF-DGKIKVW 358


>gi|126334430|ref|XP_001379111.1| PREDICTED: similar to eukaryotic translation initiation factor
           [Monodelphis domestica]
          Length = 815

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 78/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 290 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 341

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 342 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 387

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 388 YLVTFSPLMDTQDDPQAIIIWDILTGQKKRGFHCESSAHWPIFKWSHDGKF--FARMTMD 445

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++   ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 446 TLSIYETPSMGLLDKKSLKIPGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPSRQEI 505

Query: 430 LI 431
            +
Sbjct: 506 RV 507



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 25/205 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 472 SWSPGGNIIAFWVPEDKDIPARVTLMQLPSRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 531

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT-----LFINISASYSPDSSQIVFESDRE 323
            +            +I+ +       +++          I I+ ++ P+ S+  F     
Sbjct: 532 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKESI-IAFAWEPNGSK--FAVLHG 583

Query: 324 GKEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              ++ V      N    + I    +       WSPQG  +          A+  +    
Sbjct: 584 EAPRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSD 643

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLI 405
                + E        W P+GR ++
Sbjct: 644 CTMMNIAEHYMASDVEWDPTGRYVV 668


>gi|134113601|ref|XP_774535.1| hypothetical protein CNBG0310 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50257175|gb|EAL19888.1| hypothetical protein CNBG0310 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 884

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 86/240 (35%), Gaps = 19/240 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +  L+ S ++I      S + + +A+       +L V+   +      K+ G++  M   
Sbjct: 304 VHTLSISNEKISSV-AVSASGEWLAFGAAKLGQLL-VWEWQSE-SYVLKQQGHYYDMNTL 360

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFES 320
             FS +G+    +  +D  + ++  +  S         +T  I+    ++    Q++F +
Sbjct: 361 -AFSPDGQNIA-TGGEDGKVKLW--NASSGFCFVTFPEHTAAISTV-EFAKQG-QVLFTA 414

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G  + Y +     + +  +      +      P GD++         F I +     
Sbjct: 415 SLDGTVRAYDL-IRYRNFRTFTSPTPVQFSALAVDPSGDVVCAGSQD--SFEIYMWSVQT 471

Query: 381 SQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            +    L    + +    +SP+G  L  S     D   +L+S+    R    I     A+
Sbjct: 472 GKLLDILTGHTAPISGLAFSPTGNQLASSSW---DRSIRLWSVFGRSRATEPIELSGEAT 528



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 59/188 (31%), Gaps = 10/188 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A    D +    V L +              + I    F+  G + L +  
Sbjct: 361 AFSPDGQNIATGGEDGK----VKLWNASSGFCFVTFPEHTAAISTVEFAKQG-QVLFTAS 415

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  +  Y + ++       T+   +  SA +  P     V  +  +   ++Y+      
Sbjct: 416 LDGTVRAYDL-IRYRNFRTFTSPTPVQFSALAVDPSGD--VVCAGSQDSFEIYMWSVQTG 472

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               I     A      +SP G+ +A + +      +  +         +       A  
Sbjct: 473 KLLDILTGHTAPISGLAFSPTGNQLASSSWD-RSIRLWSVFGRSRATEPIELSGEATALA 531

Query: 397 WSPSGRSL 404
           + P G  +
Sbjct: 532 FRPDGNEI 539



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 36/99 (36%), Gaps = 6/99 (6%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++PD + ++         ++ V     +  + +  +   +      SP G+         
Sbjct: 22  FTPDGNSVL----SPVGNRVSVFDLVNNKSRTLPFENRKNIASIALSPDGN--VLISIDE 75

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +  A+ V  + G+    +     +   ++SP G+ +  +
Sbjct: 76  DGRALFVHFRKGTVLHHISFKRKVHHVSFSPDGKYIAIT 114



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 82/262 (31%), Gaps = 43/262 (16%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA- 249
            +L V  R G  + +++  R   +    FSP+ + +A        I        R     
Sbjct: 78  RALFVHFRKGTVLHHISFKRK--VHHVSFSPDGKYIAITHGHMVQIWNTPSHLVREFAPF 135

Query: 250 --PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFINIS 306
              +        +++  +S   +   I+  +D    +Y+++ L+    ++      + + 
Sbjct: 136 TLHREYTGHHDEVVSVCWSKTSRY-FITTSRDMTARLYTINPLEGFQPKQFGGHRDVVLG 194

Query: 307 ASYSPDSSQIVFESDREGKEQLY----------------VMQSNGSDQKRISQDKEASYF 350
           A +S D   I +   R+G   ++                ++ +  +     +   E +  
Sbjct: 195 AFFSQDEKTI-YTVSRDGAVFVWKAKKGVSEADSDVEMDILDAPTTSTSAANLALEHAVA 253

Query: 351 DPVWS---------PQGDLI----------AFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              W          P   +I              FS   F +  M +      L + +  
Sbjct: 254 YTRWGVHARHFFNQPGTKVICATFHPKTSLLIVGFSSGVFGLWEMPEFTPVHTLSISNEK 313

Query: 392 LQAPTWSPSGRSLIFSRKKDGD 413
           + +   S SG  L F   K G 
Sbjct: 314 ISSVAVSASGEWLAFGAAKLGQ 335



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 49/175 (28%), Gaps = 15/175 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R L     + +     SP+   +     D   +   +   T +        +F+  +   
Sbjct: 48  RTLPFENRKNIASIALSPDGNVLISIDEDGRALFVHFRKGTVLHHI-----SFKRKVHHV 102

Query: 264 RFSSNGKRALISVQKDEAMDIYSVD-------LQSNATERLTNTLFINISASYSPDSSQI 316
            FS +GK   I+      + I++                  T      +S  +S  S   
Sbjct: 103 SFSPDGKYIAIT--HGHMVQIWNTPSHLVREFAPFTLHREYTGHHDEVVSVCWSKTSRYF 160

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +  S R+   +LY +      Q +             +S     I      G  F
Sbjct: 161 ITTS-RDMTARLYTINPLEGFQPKQFGGHRDVVLGAFFSQDEKTIYTVSRDGAVF 214



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 63/201 (31%), Gaps = 18/201 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+   V           RV + D   +++       R  I +   S +G   LIS+ +
Sbjct: 22  FTPDGNSVLSPV-----GNRVSVFDLVNNKSRTLPFENRKNIASIALSPDGN-VLISIDE 75

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY------VMQ 332
           D    ++    +      ++    ++   S+SPD   I          Q++      V +
Sbjct: 76  DGRA-LFVHFRKGTVLHHISFKRKVH-HVSFSPDGKYIAIT--HGHMVQIWNTPSHLVRE 131

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                  R             WS        T          +   +G Q +      ++
Sbjct: 132 FAPFTLHREYTGHHDEVVSVCWSKTSRYFITTSRDMTARLYTINPLEGFQPKQFGGHRDV 191

Query: 393 Q-APTWSPSGRSLIFSRKKDG 412
                +S   +++ ++  +DG
Sbjct: 192 VLGAFFSQDEKTI-YTVSRDG 211



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 7/149 (4%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
             +D   +Y+   +  +    +    + I    FS  G +   S   D ++ ++SV  +S
Sbjct: 457 GSQDSFEIYMWSVQTGKLLDILTGHTAPISGLAFSPTGNQLA-SSSWDRSIRLWSVFGRS 515

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            ATE +        + ++ PD ++I   S   G  +L  +       K + + +      
Sbjct: 516 RATEPI-ELSGEATALAFRPDGNEIC-ASTLNG--ELIFIDVEEGQIKSVIEGRRDISGG 571

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                   L A    + + F   +   DG
Sbjct: 572 RKV--DDRLTAANNAASKYFNSVIYTADG 598


>gi|331008526|gb|EGH88582.1| hypothetical protein PSYTB_02239 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 372

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 69/186 (37%), Gaps = 26/186 (13%)

Query: 260 ILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              PR   FSS+GK   +  +    +  ++++ ++ A ++      I    + +   ++ 
Sbjct: 194 NTGPRHLAFSSDGKFLYVVGEMSGTVTAFAINQKTGALKQTGEADGIPKRLNLAQGQARD 253

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              +D +      +  ++                    +P G  +  ++ +    ++  +
Sbjct: 254 ARNNDLKDDPTPRIWAAD-----------------IRLAPNGKWLFISERTTSSVSVFKI 296

Query: 377 KKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +    +   +    V++   +    SP+GR L+ S +K    GS  Y+I  NG  + +  
Sbjct: 297 EPASGKVTFVENYPVQEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIAANGALQRVSE 354

Query: 433 TPAYAS 438
            P+   
Sbjct: 355 APSGKG 360


>gi|303287626|ref|XP_003063102.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455738|gb|EEH53041.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 396

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 42/157 (26%), Gaps = 13/157 (8%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           + IG       A  ++  G              +   D  +     L          ++S
Sbjct: 182 RVIGLSGEHAGAVCWAPEGSSVAY----PCGGVVVVSDALTGKQSHLFGHTEDVHLLTFS 237

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGE 369
            D   +     R     + +      +     Q   +       SP G  L+A    +  
Sbjct: 238 KDGRYLA-TGQRGRHPTVRLWDFETMNCVATMQAHASGLSSVDVSPDGRALVAAGMDTQG 296

Query: 370 KFAIGVMKKD-----GSQERLLVE--DSNLQAPTWSP 399
           +  I V         G+   +L    D ++    +SP
Sbjct: 297 RQLIAVWDISKTPHGGAAPMVLRHRTDYHVNCVRFSP 333


>gi|58269922|ref|XP_572117.1| WD repeat protein [Cryptococcus neoformans var. neoformans JEC21]
 gi|57228353|gb|AAW44810.1| WD repeat protein, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 884

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 86/240 (35%), Gaps = 19/240 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +  L+ S ++I      S + + +A+       +L V+   +      K+ G++  M   
Sbjct: 304 VHTLSISNEKISSV-AVSASGEWLAFGAAKLGQLL-VWEWQSE-SYVLKQQGHYYDMNTL 360

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFES 320
             FS +G+    +  +D  + ++  +  S         +T  I+    ++    Q++F +
Sbjct: 361 -AFSPDGQNIA-TGGEDGKVKLW--NASSGFCFVTFPEHTAAISTV-EFAKQG-QVLFTA 414

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G  + Y +     + +  +      +      P GD++         F I +     
Sbjct: 415 SLDGTVRAYDL-IRYRNFRTFTSPTPVQFSALAVDPSGDVVCAGSQD--SFEIYMWSVQT 471

Query: 381 SQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            +    L    + +    +SP+G  L  S     D   +L+S+    R    I     A+
Sbjct: 472 GKLLDILTGHTAPISGLAFSPTGNQLASSSW---DRSIRLWSVFGRSRATEPIELSGEAT 528



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 59/188 (31%), Gaps = 10/188 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A    D +    V L +              + I    F+  G + L +  
Sbjct: 361 AFSPDGQNIATGGEDGK----VKLWNASSGFCFVTFPEHTAAISTVEFAKQG-QVLFTAS 415

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  +  Y + ++       T+   +  SA +  P     V  +  +   ++Y+      
Sbjct: 416 LDGTVRAYDL-IRYRNFRTFTSPTPVQFSALAVDPSGD--VVCAGSQDSFEIYMWSVQTG 472

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               I     A      +SP G+ +A + +      +  +         +       A  
Sbjct: 473 KLLDILTGHTAPISGLAFSPTGNQLASSSWD-RSIRLWSVFGRSRATEPIELSGEATALA 531

Query: 397 WSPSGRSL 404
           + P G  +
Sbjct: 532 FRPDGNEI 539



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 36/99 (36%), Gaps = 6/99 (6%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++PD + ++         ++ V     +  + +  +   +      SP G+         
Sbjct: 22  FTPDGNSVL----SPVGNRVSVFDLVNNKSRTLPFENRKNIASIALSPDGN--VLISIDE 75

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +  A+ V  + G+    +     +   ++SP G+ +  +
Sbjct: 76  DGRALFVHFRKGTVLHHISFKRKVHHVSFSPDGKYIAIT 114



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 83/262 (31%), Gaps = 43/262 (16%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA- 249
            +L V  R G  + +++  R   +    FSP+ + +A        I        R     
Sbjct: 78  RALFVHFRKGTVLHHISFKRK--VHHVSFSPDGKYIAITHGHMVQIWNTPSHLVREFAPF 135

Query: 250 --PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFINIS 306
              +        +++  +S + +   I+  +D    +Y+++ L+    ++      + + 
Sbjct: 136 TLHREYTGHHDEVVSVCWSKSSRY-FITTSRDMTARLYTINPLEGFQPKQFGGHRDVVLG 194

Query: 307 ASYSPDSSQIVFESDREGKEQLY----------------VMQSNGSDQKRISQDKEASYF 350
           A +S D   I +   R+G   ++                ++ +  +     +   E +  
Sbjct: 195 AFFSQDEKTI-YTVSRDGAVFVWKAKKGVSEADSDVEMDILDAPTTSTSAANLALEHAVA 253

Query: 351 DPVWS---------PQGDLI----------AFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              W          P   +I              FS   F +  M +      L + +  
Sbjct: 254 YTRWGVHARHFFNQPGTKVICATFHPKTSLLIVGFSSGVFGLWEMPEFTPVHTLSISNEK 313

Query: 392 LQAPTWSPSGRSLIFSRKKDGD 413
           + +   S SG  L F   K G 
Sbjct: 314 ISSVAVSASGEWLAFGAAKLGQ 335



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 49/175 (28%), Gaps = 15/175 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R L     + +     SP+   +     D   +   +   T +        +F+  +   
Sbjct: 48  RTLPFENRKNIASIALSPDGNVLISIDEDGRALFVHFRKGTVLHHI-----SFKRKVHHV 102

Query: 264 RFSSNGKRALISVQKDEAMDIYSVD-------LQSNATERLTNTLFINISASYSPDSSQI 316
            FS +GK   I+      + I++                  T      +S  +S  S   
Sbjct: 103 SFSPDGKYIAIT--HGHMVQIWNTPSHLVREFAPFTLHREYTGHHDEVVSVCWSKSSRYF 160

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +  S R+   +LY +      Q +             +S     I      G  F
Sbjct: 161 ITTS-RDMTARLYTINPLEGFQPKQFGGHRDVVLGAFFSQDEKTIYTVSRDGAVF 214



 Score = 39.6 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 63/201 (31%), Gaps = 18/201 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+   V           RV + D   +++       R  I +   S +G   LIS+ +
Sbjct: 22  FTPDGNSVLSPV-----GNRVSVFDLVNNKSRTLPFENRKNIASIALSPDGN-VLISIDE 75

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY------VMQ 332
           D    ++    +      ++    ++   S+SPD   I          Q++      V +
Sbjct: 76  DGRA-LFVHFRKGTVLHHISFKRKVH-HVSFSPDGKYIAIT--HGHMVQIWNTPSHLVRE 131

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                  R             WS        T          +   +G Q +      ++
Sbjct: 132 FAPFTLHREYTGHHDEVVSVCWSKSSRYFITTSRDMTARLYTINPLEGFQPKQFGGHRDV 191

Query: 393 Q-APTWSPSGRSLIFSRKKDG 412
                +S   +++ ++  +DG
Sbjct: 192 VLGAFFSQDEKTI-YTVSRDG 211



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 7/149 (4%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
             +D   +Y+   +  +    +    + I    FS  G +   S   D ++ ++SV  +S
Sbjct: 457 GSQDSFEIYMWSVQTGKLLDILTGHTAPISGLAFSPTGNQLA-SSSWDRSIRLWSVFGRS 515

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
            ATE +        + ++ PD ++I   S   G  +L  +       K + + +      
Sbjct: 516 RATEPI-ELSGEATALAFRPDGNEIC-ASTLNG--ELIFIDVEEGQIKSVIEGRRDISGG 571

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                   L A    + + F   +   DG
Sbjct: 572 RKV--DDRLTAANNAASKYFNSVIYTADG 598


>gi|73952622|ref|XP_546100.2| PREDICTED: similar to TAF5-like RNA polymerase II
           p300/CBP-associated factor-associated factor 65 kDa
           subunit 5L (PCAF associated factor 65 beta) (PAF65-beta)
           [Canis familiaris]
          Length = 589

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/240 (13%), Positives = 70/240 (29%), Gaps = 26/240 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDM----SIRYWDLGSFTNTVLYQGHAYPVWDLDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+      ++    + P+S+ +   S   
Sbjct: 393 SP--YSLYFASGSHDRTARLWSFDR--TYPLRIYAGHLADVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              L     N+ + T+SP    +  +     D   +++ I       T  +TPA  S  +
Sbjct: 503 YKELRGHTDNITSLTFSPDSSLIASASM---DNSVRVWDI-----RNTYCSTPADGSSGE 554



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 438 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ----RLK 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 494 LWDLASGTLYKELRGHTDNITSLTFSPDSSLIA-SASMDNSVRVWDI 539


>gi|50123377|ref|YP_052544.1| putative lipoprotein [Pectobacterium atrosepticum SCRI1043]
 gi|227328563|ref|ZP_03832587.1| putative lipoprotein [Pectobacterium carotovorum subsp. carotovorum
           WPP14]
 gi|49613903|emb|CAG77356.1| putative lipoprotein [Pectobacterium atrosepticum SCRI1043]
          Length = 223

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 21/129 (16%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANY--SPV-----SIAFTKFV------- 56
           +N K+ LC + +        +  +   V         +P       I+  KF        
Sbjct: 1   MNKKVVLCSVFMSAALLSGCATESSRTVEAQKVTSYSTPYQGVRSPISIGKFENRSNYMN 60

Query: 57  -----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVL 111
                 +D LG +   ++   LQ+S  FN++ + + ++         + Q     GA  +
Sbjct: 61  GIFSDGVDRLGNQSKTILVSHLQQSGRFNVLDRTNMEELKAEAGIKGQTQ--TLKGASYV 118

Query: 112 VTGRVIKEG 120
           +TG V + G
Sbjct: 119 ITGDVTEFG 127


>gi|330924585|ref|XP_003300692.1| hypothetical protein PTT_12025 [Pyrenophora teres f. teres 0-1]
 gi|311325026|gb|EFQ91208.1| hypothetical protein PTT_12025 [Pyrenophora teres f. teres 0-1]
          Length = 748

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 16/92 (17%)

Query: 253 IGNFRSMILAPRFSSNGKRALI-SVQKDEA----MDIYSVDLQSNATERLT------NTL 301
           I  F     +P +S++G      S++ D        ++ +        +LT      +  
Sbjct: 290 IEGFEGASTSPVWSNSGSMIAFLSMKTDGYESDKNQVFIM-HDYAKPSQLTPLYASEDGK 348

Query: 302 F-INISA---SYSPDSSQIVFESDREGKEQLY 329
              + S    S+SPD  ++ F ++  G+  LY
Sbjct: 349 GRWDRSPQSISWSPDDWKLYFTAEEHGRGNLY 380



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 19/93 (20%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLV--------EDS 390
             E +   PVWS  G +IAF     + +      + +M  D ++   L         +  
Sbjct: 292 GFEGASTSPVWSNSGSMIAFLSMKTDGYESDKNQVFIMH-DYAKPSQLTPLYASEDGKGR 350

Query: 391 NLQAP---TWSPSGRSLIFSRKKDGDTGSKLYS 420
             ++P   +WSP    L F+ ++ G     LYS
Sbjct: 351 WDRSPQSISWSPDDWKLYFTAEEHGRG--NLYS 381


>gi|255530279|ref|YP_003090651.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Pedobacter heparinus DSM 2366]
 gi|255343263|gb|ACU02589.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Pedobacter heparinus DSM 2366]
          Length = 632

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 33/90 (36%), Gaps = 2/90 (2%)

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSR 408
               SP G  +++ K  G+   I +   +  + + +   +D  +    W  +   + +  
Sbjct: 41  GYRLSPDGKNLSYLKLQGQDQNIYIEDIETGRGKNITRLKDKKIVFYFWVSNHELIYYKE 100

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                  S ++ ID  G+NE  +     + 
Sbjct: 101 VDAASRQSDVFIIDKEGKNERQLVNNEKSR 130



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 53/139 (38%), Gaps = 8/139 (5%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-- 367
           SPD   + +   +   + +Y+        K I++ K+       W    +LI + +    
Sbjct: 45  SPDGKNLSYLKLQGQDQNIYIEDIETGRGKNITRLKDKKIVFYFWVSNHELIYYKEVDAA 104

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTW---SPSGRSLIFSRKKDGDTGSKLYSIDL- 423
             +  + ++ K+G  ER LV +   +           + L+ S  K   T   +Y +++ 
Sbjct: 105 SRQSDVFIIDKEGKNERQLVNNEKSRLKVIEDQLIDDKYLLVSSNKRDSTVFDVYRLNVR 164

Query: 424 NGRNETLINTPAYASDPQW 442
           NG+ E     P    D  W
Sbjct: 165 NGQMEMAAKNPGNIID--W 181


>gi|242824109|ref|XP_002488192.1| transcriptional repressor TupA/RocA, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218713113|gb|EED12538.1| transcriptional repressor TupA/RocA, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 583

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/197 (13%), Positives = 62/197 (31%), Gaps = 19/197 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPRFSSNGKRALIS 275
            ++P+    A    +  D   V+  + +     + + +    S++   RFS +GK     
Sbjct: 237 NWNPD-DLPATQKREGPDWYAVFNPEVQRVLDVELVHHLVHDSVVCCVRFSRDGKYVA-- 293

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFIN-------ISASYSPDSSQIVFESDREGKEQL 328
                       D+ +           ++        S  +SPD   +   ++    +Q+
Sbjct: 294 --TGCNRSAQIFDVATGQNVATLQDESVDKDGDLYIRSVCFSPDGKYLATGAE---DKQI 348

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            V        K +    E   +   ++  G  IA +    +   +  +  +G     L  
Sbjct: 349 RVWDIATRSIKHVFTGHEQDIYSLDFAGNGRYIA-SGSGDKTVRLWDV-LEGKLVYTLSI 406

Query: 389 DSNLQAPTWSPSGRSLI 405
           +  +     SP G  + 
Sbjct: 407 EDGVTTVAMSPDGHYVA 423



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 39/238 (16%), Positives = 81/238 (34%), Gaps = 44/238 (18%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           GR I  G     V  RLWDV + K +                         +++ E G  
Sbjct: 378 GRYIASGSGDKTV--RLWDVLEGKLV------------------------YTLSIEDGVT 411

Query: 174 NSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTP--SRDQILFEPRFSPNQQKVAYAT 230
              +      V +G +  S+ V D   G  +  L         ++   F+PN + +   +
Sbjct: 412 TVAMSPDGHYVAAGSLDKSVRVWDTTTGYLVERLENPDGHKDSVYSVAFAPNGRDLVSGS 471

Query: 231 YDDE------DILRVYLMDTRI--DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            D           R  L  T +   +  +     +  +L+   + +G   ++S  KD  +
Sbjct: 472 LDKTIKMWELTAPRGMLPGTGVKGGKCVRTFEGHKDFVLSVCLTPDGHW-VMSGSKDRGV 530

Query: 283 DIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             +  D  + A + +      ++ S + SP ++     S   G  +  + + +  + +
Sbjct: 531 QFW--DPNTGAAQMMLQGHKNSVISVAPSPSNNLFATGS---GDMRARIWRYSTYNGR 583


>gi|254230059|ref|ZP_04923457.1| FOG: WD40 repeat [Vibrio sp. Ex25]
 gi|151937393|gb|EDN56253.1| FOG: WD40 repeat [Vibrio sp. Ex25]
          Length = 383

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 80/220 (36%), Gaps = 25/220 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             +   ++   R S N +    A+      +   + D    ++        ++I     +
Sbjct: 130 LDADANVVSHIRISDNGRYAVTASQ-----MNFAVWDLGWTQSKGLWSISDALIRDVDIT 184

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           SNG++ L+ +   +A+ +  V       E L +   +N S + SP+     F        
Sbjct: 185 SNGEQVLLGLSNGKAIYVNLV--TGRRLEFLAHREKVN-SVAISPNGR---FALTGGNDY 238

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           + Y+  +      R + + E           G  +A T   G +  I  +K  G +   L
Sbjct: 239 KAYLWDTETGQVLR-TFEHEQRVVRVALQRDGK-LAMTSDGGNQAVIWDLKT-GQEVTQL 295

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                    +WS   R LIFS  +  D G++L +   +GR
Sbjct: 296 S--------SWS---RQLIFSTARFSDDGTQLVTGTPSGR 324



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 88/265 (33%), Gaps = 41/265 (15%)

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV-----E 127
           L R   F L+        + + +   +  +   L A   V   +      R  V      
Sbjct: 97  LSRDGRFALLYSQQHHLMLWDLEQNEQLANLGELDADANVVSHIRISDNGRYAVTASQMN 156

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           F +WD+          +  S   W     +ISD + + +     D  S    V   + +G
Sbjct: 157 FAVWDLG---------WTQSKGLW-----SISDALIRDV-----DITSNGEQVLLGLSNG 197

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V    G  + +L             SPN +          +  + YL DT   
Sbjct: 198 KA---IYVNLVTGRRLEFLAHREKVNSV--AISPNGRF----ALTGGNDYKAYLWDTETG 248

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTL--FIN 304
           +  +   + + ++       +GK   +++  D        DL++     +L++     I 
Sbjct: 249 QVLRTFEHEQRVVR-VALQRDGK---LAMTSDGGNQAVIWDLKTGQEVTQLSSWSRQLIF 304

Query: 305 ISASYSPDSSQIVFESDREGKEQLY 329
            +A +S D +Q+V      G+  ++
Sbjct: 305 STARFSDDGTQLV-TGTPSGRVSIW 328



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YS 310
                +   S +G+ AL+  Q+     +   DL+    E+L N   ++  A+       S
Sbjct: 89  PQGATSFALSRDGRFALLYSQQ---HHLMLWDLE--QNEQLANLGELDADANVVSHIRIS 143

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            +    V  S         V     +  K +    +A   D   +  G+ +     +G+ 
Sbjct: 144 DNGRYAVTASQ----MNFAVWDLGWTQSKGLWSISDALIRDVDITSNGEQVLLGLSNGK- 198

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            AI V    G +   L     + +   SP+GR   F+     D  + L+  
Sbjct: 199 -AIYVNLVTGRRLEFLAHREKVNSVAISPNGR---FALTGGNDYKAYLWDT 245



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 41/130 (31%), Gaps = 11/130 (8%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            R  + +   S NG+    ++        Y  D ++    R        +  +   D  +
Sbjct: 215 HREKVNSVAISPNGR---FALTGGNDYKAYLWDTETGQVLRTFEHEQRVVRVALQRDG-K 270

Query: 316 IVFESDREGKEQLYVMQS-NGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +   SD  G  Q  +     G +  ++S   ++  +    +S  G  +     SG    +
Sbjct: 271 LAMTSD--GGNQAVIWDLKTGQEVTQLSSWSRQLIFSTARFSDDGTQLVTGTPSG---RV 325

Query: 374 GVMKKDGSQE 383
            +      + 
Sbjct: 326 SIWDTQTGKR 335


>gi|81300862|ref|YP_401070.1| peptidase [Synechococcus elongatus PCC 7942]
 gi|81169743|gb|ABB58083.1| probable peptidase [Synechococcus elongatus PCC 7942]
          Length = 643

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 77/262 (29%), Gaps = 43/262 (16%)

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQII--GKKFFSSPASWR---------------KI 154
            TG++ +       V  R  +       I  G+ +FS     R               ++
Sbjct: 55  ATGQIEELTPTPWNVRTRAHEYGGGSYCIDQGEVYFSHDKDQRLYRLILGQDPQPLTPEL 114

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQI 213
               +D +              I    +    G   +++  +   G      +       
Sbjct: 115 PLKFADGLIDRQRQRW------IGVREDHRPEGEAIDAIVAIPLTGEPSEGQILTIGADF 168

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRV--------YLMDTRIDRAPKRIGNFRSMILAPRF 265
              PR S + Q++A+ T+   ++           +L D  +    K  G  R  +  P +
Sbjct: 169 YASPRLSADGQRLAWLTWSHPNMPWDGTELWVAEFLADGSLATPQKVAGGDRESVFQPEW 228

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-------SYSP-DSSQIV 317
             +G+   +S   D +            T+ +  T              +++P D  + +
Sbjct: 229 LPDGRLGFVS---DRSSWWNLYSWDGQNTQAIAPTEAEFGLPQWVFGMRTWAPIDGDRWL 285

Query: 318 FESDREGKEQLYVMQSNGSDQK 339
             S + G   L ++       K
Sbjct: 286 AASTKAGHWSLSLVDLATGSLK 307



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 53/312 (16%), Positives = 105/312 (33%), Gaps = 50/312 (16%)

Query: 159 SDDIYQSITGEKGDFNSRI-LFVSESVVSGIIKNSLCVMDRDGA-----NIRYLTPSRDQ 212
           +D I Q   G  G   S    +  ES  +   + +L      G         +   +R  
Sbjct: 15  ADLIVQGSVGLSGVMLSGGDRYWLESRPTERGRTTLIRQSATGQIEELTPTPWNVRTRAH 74

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG--- 269
                 +  +Q +V ++   D+ + R+ L      + P+ +     +  A     +G   
Sbjct: 75  EYGGGSYCIDQGEVYFSHDKDQRLYRLIL-----GQDPQPLTPELPLKFA-----DGLID 124

Query: 270 --KRALISVQKDEAMDIYSVDL--------QSNATERLTNTLFINISASYSPDSSQIVFE 319
             ++  I V++D   +  ++D         + +  + LT       S   S D  ++ + 
Sbjct: 125 RQRQRWIGVREDHRPEGEAIDAIVAIPLTGEPSEGQILTIGADFYASPRLSADGQRLAWL 184

Query: 320 SDREGKE-----QLYVMQ--SNGS--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +           +L+V +  ++GS    ++++     S F P W P G  + F       
Sbjct: 185 TWSHPNMPWDGTELWVAEFLADGSLATPQKVAGGDRESVFQPEWLPDGR-LGFVSDRSSW 243

Query: 371 FAIGVMKKDGSQERLLVE------DSNLQAPTWSP-SG-RSLIFSRKKDGDTGSKLYSID 422
           + +       +Q     E             TW+P  G R L  +  K G     L  +D
Sbjct: 244 WNLYSWDGQNTQAIAPTEAEFGLPQWVFGMRTWAPIDGDRWLA-ASTKAGHWSLSL--VD 300

Query: 423 LNGRNETLINTP 434
           L   +    + P
Sbjct: 301 LATGSLKPFDLP 312


>gi|332877553|ref|ZP_08445300.1| peptidase, S9A/B/C family, catalytic domain protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
 gi|332684659|gb|EGJ57509.1| peptidase, S9A/B/C family, catalytic domain protein [Capnocytophaga
           sp. oral taxon 329 str. F0087]
          Length = 735

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 71/216 (32%), Gaps = 34/216 (15%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
                S  +G+    LC  +     I  + P  D      R S + +++   ++ D    
Sbjct: 15  AVPVHSNATGLSLKELCAGEYAAKRIYGVNPLNDG-ESYSRLSDDHKQIITYSFKDGQQK 73

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQS 291
            V L D    R  K +      IL    S + K+ LI        +       Y  D+ +
Sbjct: 74  DV-LFDVATARDVK-LEKIDGYIL----SPDEKKMLIQTETKPIYRHSFTAVYYLYDIAN 127

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--- 348
                L++      S  +SPD + + F  D        V     + + +I++D + +   
Sbjct: 128 RTLTPLSDN-GPQQSPKFSPDGNLVGFVRD---NNLFLVKLLFNNSESQITKDGKFNEVI 183

Query: 349 YFDPVW--------------SPQGDLIAFTKFSGEK 370
              P W              +    +IA+ ++   K
Sbjct: 184 NGIPDWVNEEEFSTSSSFDFNADNTMIAWIRYDESK 219


>gi|326431547|gb|EGD77117.1| hypothetical protein PTSG_07451 [Salpingoeca sp. ATCC 50818]
          Length = 764

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 66/185 (35%), Gaps = 20/185 (10%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +  R  K +      I   R+S++G+  L +  +D  M ++S          L  +    
Sbjct: 91  QTGRIEKTVEAHTGAITTLRWSADGQSIL-TAGEDGLMKVWS--RAGMLRTVLAQSAQPV 147

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             A++SP  S+ +        + + V+    + +    +  +       W    +LI  +
Sbjct: 148 YGAAWSPCGSRAI----HTAGKHVAVVSLKATAKAETWKAHDGVVLCVDWGAASNLIV-S 202

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLI---FSRKKDGDTGSK 417
                ++ +      G   RLL   +    P     WSP+G +     ++  +  D    
Sbjct: 203 GGEDGRYKVW--DAFG---RLLYASTPDLYPITSCRWSPTGDAFAVGGYNSVRLCDRAGW 257

Query: 418 LYSID 422
            Y++D
Sbjct: 258 SYAVD 262



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 68/219 (31%), Gaps = 19/219 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+S + Q +   T  ++ +++V+   +R       +      +    +S  G RA+    
Sbjct: 110 RWSADGQSIL--TAGEDGLMKVW---SRAGMLRTVLAQSAQPVYGAAWSPCGSRAI---- 160

Query: 278 KDEAMDIYSVDL-QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                 +  V L  +   E       + +   +   S+ IV      G++  Y +     
Sbjct: 161 HTAGKHVAVVSLKATAKAETWKAHDGVVLCVDWGAASNLIV----SGGEDGRYKVWDAFG 216

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAP 395
                S           WSP GD  A     G   ++ +  + G    +      ++   
Sbjct: 217 RLLYASTPDLYPITSCRWSPTGDAFAV----GGYNSVRLCDRAGWSYAVDKPATGSVYEV 272

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            WS  G  L  +         +L    ++     +  T 
Sbjct: 273 QWSHDGTRLAGACASGDVLLGQLVMRSVSSPRYVVTQTG 311


>gi|325182654|emb|CCA17109.1| actinrelated protein 2/3 complex subunit putative [Albugo laibachii
           Nc14]
          Length = 430

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 60/195 (30%), Gaps = 36/195 (18%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    D I+    +SP    +   ++D    +  Y   T   +    +       +  ++
Sbjct: 81  ILTEHDMIVTGLDWSPVNDMIVSCSHDRSAYVWQYDSPTCKWKPLMVVLRITRAAIDVKW 140

Query: 266 SSNGKRALISV----------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           S NGK+  +S           Q  E   I         ++ +        S ++ P+S  
Sbjct: 141 SPNGKKFAVSSGAKCVAVCYYQPSENWWI---------SKHIKKHKSTVTSLAWHPNSQL 191

Query: 316 IVFESDREGKEQLYV-------MQSNGSDQKRISQDKE---------ASYFDPVWSPQGD 359
           +V     + K +++        M  +      I    E         A     VWSP GD
Sbjct: 192 LV-TGSTDLKCRIFSAHIAEVDMSVDVGPFASIGPFGEILAEFEHANAWINSVVWSPSGD 250

Query: 360 LIAFTKFSGEKFAIG 374
            +AF         + 
Sbjct: 251 RVAFAGHGSSVHFVH 265



 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 77/218 (35%), Gaps = 35/218 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRV--YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            ++ ++ KVA     +E  +    + ++    R    +     ++    +S      + S
Sbjct: 45  TWNKDRSKVAVCPNTNEIWIYSNCHNVNVAKWRREAILTEHDMIVTGLDWSPVNDMIV-S 103

Query: 276 VQKDEAMDIYSVDLQSNATE------RLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              D +  ++  D  +   +      R+T    I++   +SP+  +    S   G + + 
Sbjct: 104 CSHDRSAYVWQYDSPTCKWKPLMVVLRITR-AAIDV--KWSPNGKKFAVSS---GAKCVA 157

Query: 330 VMQSNGSDQKRISQ---DKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKD----- 379
           V     S+   IS+     +++     W P   L+           F+  + + D     
Sbjct: 158 VCYYQPSENWWISKHIKKHKSTVTSLAWHPNSQLLVTGSTDLKCRIFSAHIAEVDMSVDV 217

Query: 380 ------GSQERLLVE----DSNLQAPTWSPSGRSLIFS 407
                 G    +L E    ++ + +  WSPSG  + F+
Sbjct: 218 GPFASIGPFGEILAEFEHANAWINSVVWSPSGDRVAFA 255


>gi|303281028|ref|XP_003059806.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226458461|gb|EEH55758.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 681

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/215 (14%), Positives = 70/215 (32%), Gaps = 19/215 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G   + +  +D      R L    +  L    + P          + E    VY+   R
Sbjct: 373 AGTRGSDVWEVDDT---PRVLIDGHEASLSGVCWHPTTPGEFATASEGE---LVYVWCAR 426

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFIN 304
             R  + +G   +      FS +G R  +         ++ +D +S    + +     + 
Sbjct: 427 TKRLKRAVGLPGNKARCVGFSPDGSRLAVGCVDGG---VHVLDAKSLRRLKIIKTHADVV 483

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIA 362
               +SP  S +   S     + + V  +     KR+S+     A+     WS   + + 
Sbjct: 484 TDLKFSPCGSMLATCS---ADQFVDVFDAKLDAYKRLSRCAGHSATVRHLDWSADSETL- 539

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             +     + I        + +++    + +  TW
Sbjct: 540 --RSVCSAYEILYFSPASGK-QVMKNQRDQKWATW 571


>gi|212544326|ref|XP_002152317.1| hypothetical protein PMAA_001750 [Penicillium marneffei ATCC 18224]
 gi|210065286|gb|EEA19380.1| hypothetical protein PMAA_001750 [Penicillium marneffei ATCC 18224]
          Length = 631

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 70/201 (34%), Gaps = 25/201 (12%)

Query: 123 RLRVEFRLWD------VKDRKQIIGKK----FFSSPASWRKIAHTISDDIYQSITGEKGD 172
            L++   L+D       K   Q+  +     + +   + R     ++      +  E G 
Sbjct: 177 SLQLSRELFDGILNMGRKKEAQLRSRSSLALYTALRPAKRSTCPDMAPTAGVRLFPETGM 236

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
             S+           ++   L  ++ D +         +  +    FSPN + +A  ++D
Sbjct: 237 AYSK-------SQDTLVPRRLPKVEEDWSAELETLEGHESWVQSVAFSPNGRLLASGSHD 289

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                 V L D       + +      + +  FS +G+  L++   D+ + ++  D  + 
Sbjct: 290 K----TVKLWDLATGALQQTLECHEDSVCSVAFSLDGR--LLASSSDKTIKLW--DTATG 341

Query: 293 ATERLTNTLFINISASYSPDS 313
           A +R  +   +     +S + 
Sbjct: 342 ALQRTLHIEGVITDLRFSKEG 362



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 9/124 (7%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
             R+  ++       + +    S + +  FS NG+    S   D+ + ++  DL + A +
Sbjct: 247 PRRLPKVEEDWSAELETLEGHESWVQSVAFSPNGRLLA-SGSHDKTVKLW--DLATGALQ 303

Query: 296 R-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           + L        S ++S D   +   SD+     + +  +     +R +   E    D  +
Sbjct: 304 QTLECHEDSVCSVAFSLDGRLLASSSDKT----IKLWDTATGALQR-TLHIEGVITDLRF 358

Query: 355 SPQG 358
           S +G
Sbjct: 359 SKEG 362


>gi|198453707|ref|XP_001359305.2| GA10379 [Drosophila pseudoobscura pseudoobscura]
 gi|198132477|gb|EAL28450.2| GA10379 [Drosophila pseudoobscura pseudoobscura]
          Length = 1244

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 84/213 (39%), Gaps = 15/213 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+Q+ VA+ T     ++     D   ++  +         +   +   GK+     Q
Sbjct: 109 AWSPSQEVVAFITTSHNVVVMNSTFDVIAEQPLEAELPADQQFINVGW---GKK---ETQ 162

Query: 278 KDEAMDIYSVDLQSNATERLTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              +    +    ++ T ++T  L   +++ ++  D +  V   +  G     V  + G 
Sbjct: 163 FHGSAGKQAAKQSTDQTAQMTQELLSQDVNIAWRGDGAYFVVSYESGGGRTFKVYDNEGK 222

Query: 337 DQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QA 394
            Q   + +K ++  +   W P G+ IA  ++   K  I + +K+G + R LV   +L + 
Sbjct: 223 LQH--TAEKSSNLREIIAWRPSGNWIALPQWFPNKSTISLFEKNGLRHRELVLPFDLQEE 280

Query: 395 P----TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           P     WS     L     K+ +   ++Y   +
Sbjct: 281 PILQLKWSEDSDILAIRTAKEKEQQQRVYLYTI 313


>gi|330985331|gb|EGH83434.1| hypothetical protein PLA107_09923 [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 372

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 69/186 (37%), Gaps = 26/186 (13%)

Query: 260 ILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              PR   FSS+GK   +  +    +  ++++ ++ A ++      I    + +   ++ 
Sbjct: 194 NTGPRHLAFSSDGKFLYVVGEMSGTVTAFAINQKTGALKQTGEADGIPKRLNLAQGQARD 253

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              +D +      +  ++                    +P G  +  ++ +    ++  +
Sbjct: 254 ARNNDLKDDPTPRIWAAD-----------------IRLAPNGKWLFISERTTSSVSVFKV 296

Query: 377 KKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +    +   +    V++   +    SP+GR L+ S +K    GS  Y+I  NG  + +  
Sbjct: 297 EPASGKVTFVENYPVQEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIAANGALQRVSE 354

Query: 433 TPAYAS 438
            P+   
Sbjct: 355 APSGKG 360


>gi|326505100|dbj|BAK02937.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 346

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/266 (13%), Positives = 80/266 (30%), Gaps = 31/266 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           SG     + +    G    Y +       + +  ++ +  ++  A+   +  LRV+  D 
Sbjct: 73  SGSHDKDIFLWYVHGECKNYMVLRGHKNAILDLHWTTDGSQIISAS--PDKTLRVW--DV 128

Query: 245 RIDRAPKRIGNFRSMILA--PR--FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
              +  K++    S + +  P   +       ++S   D    ++  DL+     +    
Sbjct: 129 ETGKQVKKMAEHASFVNSCCPSRKWPP----LVVSGSDDGTAKLW--DLRQRGAIQTLPD 182

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
            F   + S+S  + + VF    +    +       ++     +  +        SP G  
Sbjct: 183 KFQITAVSFSEAADK-VFTGGLD--NDVKWWDLRKNEVTECLKGHQDMITGMQLSPDGSY 239

Query: 361 IAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQA-----PTWSPSGRSLIFSRKKDGD 413
           +       E   + +     +    +      +         +WSP  R +       G 
Sbjct: 240 LLTNAMDNELKIWDLRPYAPENRNIKTFTGHQHNFEKTLLKCSWSPDNRKV-----TAGS 294

Query: 414 TGSKLYSIDLNGRNETLINTPAYASD 439
               +Y  D   R   L   P +   
Sbjct: 295 ADRMVYIWDTTSR-RILYKLPGHNGS 319


>gi|312090320|ref|XP_003146571.1| WD40 associated region in TFIID subunit family protein [Loa loa]
 gi|307758264|gb|EFO17498.1| WD40 associated region in TFIID subunit family protein [Loa loa]
          Length = 617

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                + +  FS + KR L+S  +D  + ++S+ ++SN                +SP S 
Sbjct: 363 GHNGPVYSLSFSPD-KRLLLSSSRDGTVRLWSLAVRSNVVVY--KHAAPIWEVQFSPRSY 419

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                   +G   L+          RI  D  +      + P  +   F   S +++ + 
Sbjct: 420 YFA-TGSADGAAMLWTTDR--LQPLRIFSDALSDVTCIDFHPNCNY--FAGGSDDRY-VR 473

Query: 375 VMK-KDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           V     G+  R       +++    SP GR L        +    L+ +
Sbjct: 474 VWDVLSGTCVRYFAGHKGSIRGLKISPCGRYLA---SLGSEGSLVLWDM 519



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 76/221 (34%), Gaps = 19/221 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                +  ++   FSP+++ +  ++ D    +R++ +  R +     +    + I   +F
Sbjct: 360 TFQGHNGPVYSLSFSPDKRLLLSSSRD--GTVRLWSLAVRSNV---VVYKHAAPIWEVQF 414

Query: 266 SSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
           S   +    +    D A  +++ D       R+ +    +++   + P+ +     SD  
Sbjct: 415 SP--RSYYFATGSADGAAMLWTTDRL--QPLRIFSDALSDVTCIDFHPNCNYFAGGSD-- 468

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + V         R     + S      SP G  +A +  S     +  M       
Sbjct: 469 -DRYVRVWDVLSGTCVRYFAGHKGSIRGLKISPCGRYLA-SLGSEGSLVLWDMALQKMVC 526

Query: 384 RLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              V     Q P  +S  G +L  +R    D+    YS+D 
Sbjct: 527 MQDVSALPYQVPIEFSRDGAALAVAR---ADSALSFYSVDT 564


>gi|255007943|ref|ZP_05280069.1| hypothetical protein Bfra3_02313 [Bacteroides fragilis 3_1_12]
 gi|313145655|ref|ZP_07807848.1| predicted protein [Bacteroides fragilis 3_1_12]
 gi|313134422|gb|EFR51782.1| predicted protein [Bacteroides fragilis 3_1_12]
          Length = 952

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 66/199 (33%), Gaps = 33/199 (16%)

Query: 263 PRFSSNGKRALISV-QKDEAMDIYSVDLQSNAT------------ERLTNTLFINISASY 309
           P    +G+   +S    +    +  ++ +                + LT    ++I   +
Sbjct: 396 PAIDKSGRTIAVSRPTVEGKNQLVLINAEKGKELSSFDVPDNAFIKELTFGEGLDI---F 452

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S         +  +    L        + K + +   A+   P W   G L  F   +  
Sbjct: 453 S--------IAVTDSGTSLLEFNPRSGEWKELIKTTSANITSPTW-KDGKLF-FESGANG 502

Query: 370 KFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              I  +     Q  RL         P++S SG  L+F+  +    G ++ ++  +    
Sbjct: 503 TNNIYCLHLSDKQVYRLTAARFGAFDPSFSQSGNHLLFADYQAD--GYRIAALSTD---- 556

Query: 429 TLINTPAYASDPQWVGFMD 447
           +L+   A  + P  + F++
Sbjct: 557 SLLFEKADLARPAPMPFVE 575



 Score = 43.1 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 39/109 (35%), Gaps = 2/109 (1%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            ++    +    +   + R     + I    + I +P +  +GK        +   +IY 
Sbjct: 451 IFSIAVTDSGTSLLEFNPRSGEWKELIKTTSANITSPTW-KDGK-LFFESGANGTNNIYC 508

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + L      RLT   F     S+S   + ++F   +    ++  + ++ 
Sbjct: 509 LHLSDKQVYRLTAARFGAFDPSFSQSGNHLLFADYQADGYRIAALSTDS 557


>gi|271968664|ref|YP_003342860.1| serine/threonine protein kinase-like protein [Streptosporangium
           roseum DSM 43021]
 gi|270511839|gb|ACZ90117.1| Serine/threonine protein kinase-like protein [Streptosporangium
           roseum DSM 43021]
          Length = 673

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 35/235 (14%), Positives = 74/235 (31%), Gaps = 22/235 (9%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------- 274
           +  ++      D                  R+    +    P  S +GK   +       
Sbjct: 386 DPVRLVSYFITDNKGPVYSTYAREPGGEAFRLIAQNADFGDPTVSPDGKWVAVNPWLKFA 445

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV-----FESDRE--GKEQ 327
           +   D    I     +  + + L       +S ++SPDS +++     F+  +E      
Sbjct: 446 ASSYDYVTFINRATGEKFSVDTL-KQPLRGLSGTWSPDSRRLLLTFYEFDVKQEVQYPAG 504

Query: 328 LYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMKKDGSQER 384
             V+         + + D+   Y +  WSP G L+  A+       F +    + G   R
Sbjct: 505 FVVVDVGTRRATVVKTDDQRDGYGNFDWSPDGTLVVGAYEHKKP-AFGLRFRDQSGKVVR 563

Query: 385 LLVEDSNLQAP-TWSPSGRSLI-FSRKKDGDTGSK-LYSIDLNGRNETLINTPAY 436
            +     +  P  +SPSG     +  +  G   +  ++ +    R  ++      
Sbjct: 564 TMPWVGLIPGPGIFSPSGTRFYTYCPENKGKLSAGCVWDVKTGNRTASVPIWDGD 618


>gi|159490378|ref|XP_001703156.1| THO complex 3 G protein beta subunit [Chlamydomonas reinhardtii]
 gi|158270786|gb|EDO96621.1| THO complex 3 G protein beta subunit [Chlamydomonas reinhardtii]
          Length = 347

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/248 (13%), Positives = 69/248 (27%), Gaps = 51/248 (20%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + P+   V  +  + +    +   D R ++    +           +S +G   +++   
Sbjct: 98  WRPDHADVLASCSNSKSDTNIRFHDARTNKQTAAVALSNEKNQCLSWSPDGFMLVVTTSS 157

Query: 279 DE------------------------------AMDIYSVDLQSNATE------------R 296
           DE                                 + ++ L   +              R
Sbjct: 158 DELVFIDTRKMRKQRQWSMTGHMKMSEVRWGPTPGMLTLALDDGSLRISPLHKLDAPIWR 217

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWS 355
           L +        +YS D   +       G + L  +         R     + S     +S
Sbjct: 218 LASHASHTTCLAYSKDFKLLA----SGGSDALVSLWDMEEVICLRTFCRPDQSVRAMSFS 273

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRK--KDG 412
             G  +A+    G    I V+     +    +   S  +   WSP+ + L F     K+G
Sbjct: 274 SDGAWLAYVSEDGYG-TIDVVGTATGELAATLNLKSYCECVAWSPAAQVLAFGGDDTKEG 332

Query: 413 DTGSKLYS 420
                L++
Sbjct: 333 YGAVSLWA 340


>gi|108757555|ref|YP_633636.1| WD domain-/G-beta repeat-containing protein [Myxococcus xanthus DK
            1622]
 gi|108461435|gb|ABF86620.1| WD domain G-beta repeat protein [Myxococcus xanthus DK 1622]
          Length = 1587

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 69/245 (28%), Gaps = 30/245 (12%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISV 276
             FS + Q +A     +     V   +      P  I    ++   P  +    +   ++ 
Sbjct: 1214 AFSHDGQFLAVRCGVNVRFWDVAQANRGPRTQPPPIEAGINLTSLPAHW----RWRHVTP 1269

Query: 277  QKDEAMDIYSVDLQSNATERLTNTLFI---NISASYS--------PDSSQIVFESDREGK 325
             +D A + +    ++ A  + T            ++S        P         +R   
Sbjct: 1270 TEDHATESFLASPRTRAHLQRTEVPGDGACQTQRTFSQSALVEFAPSGRYFAIGDERS-- 1327

Query: 326  EQLYVMQSNGSDQKRISQDKEASYF-----DPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                 +    +   R++++   +          +SP G+         E  AI      G
Sbjct: 1328 -----VYLGSARDCRLTREAPLAASAITSQGASFSPDGERFVTISNVPESSAIW-ESATG 1381

Query: 381  SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASD 439
            ++   L          +SP  +    +   D     + Y +D  NG  + L         
Sbjct: 1382 TKLAPLPTSLGAVVMAFSPDSKYFAVANHPDVYWMGQAYLLDATNGEKKPLAAIDGKVKA 1441

Query: 440  PQWVG 444
              +  
Sbjct: 1442 LSFSP 1446



 Score = 36.5 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 20/167 (11%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSP+ +  A A + D   +    +    +   K +      + A  FS +  R +    
Sbjct: 1397 AFSPDSKYFAVANHPDVYWMGQAYLLDATNGEKKPLAAIDGKVKALSFSPDTSRLVAVTD 1456

Query: 278  KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS--QIVF-ESDREGKEQLYVMQSN 334
                  I+  D  S A  R      I++S          Q  F  SD  GK   +     
Sbjct: 1457 ----DAIHLFDPNSGALVRR-----IDVSTDIHVKVRHAQARFGVSDTSGKLHFWR---- 1503

Query: 335  GSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKFAIGVMKKD 379
             SD + +++  +         P   G  IA   F  +   +  ++ D
Sbjct: 1504 TSDGRHVAELHQGYRSGLEMEPDEEGTRIA--TFDSDGAYVFSLRPD 1548


>gi|51891674|ref|YP_074365.1| hypothetical protein STH536 [Symbiobacterium thermophilum IAM
           14863]
 gi|51855363|dbj|BAD39521.1| hypothetical protein [Symbiobacterium thermophilum IAM 14863]
          Length = 520

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 59/189 (31%), Gaps = 23/189 (12%)

Query: 262 APRFSSNG------KRALISVQKDEAMDIYSVDLQSNATER--LTNTLFINISASYSPDS 313
           A R++  G       R   S  +      Y VDL +   E   L      +   + S D 
Sbjct: 26  ASRWAVEGATDAVEHRMYDSTLEIPNPGFYIVDLSTGRAETWLLKGRAAEDTDYALSEDG 85

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
             I  +    G  ++Y +     +       + A       +P   L+   +   E+   
Sbjct: 86  RWITLQ----GDGRIYWVNRETGEA---FSWQPAELRLRATAPDRFLLEAVQDRAERLTF 138

Query: 374 GVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKDGD-----TGSKLYSIDLNG 425
            V        + L  D          +SP G  ++ S  ++G         ++Y +DL  
Sbjct: 139 HVADGRFRLLQTLTADLGGQQAAGAAFSPDGTQVVLSTSREGQIEDTTADVRVYLVDLAT 198

Query: 426 RNETLINTP 434
           R    +  P
Sbjct: 199 RKVRDLGGP 207



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 67/190 (35%), Gaps = 20/190 (10%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQKDEAMD---- 283
           A  D  + L  ++ D R         +      A   FS +G + ++S  ++  ++    
Sbjct: 128 AVQDRAERLTFHVADGRFRLLQTLTADLGGQQAAGAAFSPDGTQVVLSTSREGQIEDTTA 187

Query: 284 ---IYSVDLQSNATERLTNTL----FINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
              +Y VDL +     L           +SA   P + Q+V     +G E    + ++ S
Sbjct: 188 DVRVYLVDLATRKVRDLGGPPEPEEGTVVSAELQPHADQLVVSYLVQGMEPTGHVWAS-S 246

Query: 337 DQKRISQDKEASYFDPV------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             +  S   E     PV       SP G L+  +      FA  V+  D +  R L    
Sbjct: 247 IVRLYSWQGELLAEYPVAGQGARPSPDGRLLV-SYDDLGHFADAVVVTDLATGRPLFRVL 305

Query: 391 NLQAPTWSPS 400
           N  A  W+  
Sbjct: 306 NAWARGWTAD 315


>gi|313243576|emb|CBY42273.1| unnamed protein product [Oikopleura dioica]
          Length = 247

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 59/185 (31%), Gaps = 14/185 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + Q     ++D      + L D       +R       +L+  FS + ++ L S  +D
Sbjct: 2   SSDGQYALSGSWDA----TLRLWDLASGNTVRRFVGHTKDVLSVSFSPDNRQIL-SAARD 56

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNG 335
             + ++     +    + T     +        +SP     V  S     + + V     
Sbjct: 57  RTIKLW----NTVGVCKFTIQENCHTEWVSCVRFSPLPQTPVIVS-AGWDKLVKVWNLTN 111

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              KR  +           SP G L A     G+     +  ++      L     + A 
Sbjct: 112 CKLKRDYRGHTGYLNTVNVSPDGSLCASGGRDGQAKLWDIGSEEAKPLHTLEAGDEIYAL 171

Query: 396 TWSPS 400
           T+SP+
Sbjct: 172 TFSPN 176



 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 90/247 (36%), Gaps = 22/247 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    +L + D    N         + +    FSP+ +++  A     D          
Sbjct: 10  SGSWDATLRLWDLASGNTVRRFVGHTKDVLSVSFSPDNRQILSAA---RDRTIKLWNTVG 66

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKR-ALISVQKDEAMDIYSVDLQSNATER-LTNTLFI 303
           + +   +       +   RFS   +   ++S   D+ + ++  +L +   +R        
Sbjct: 67  VCKFTIQENCHTEWVSCVRFSPLPQTPVIVSAGWDKLVKVW--NLTNCKLKRDYRGHTGY 124

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIA 362
             + + SPD S       R+G+ +L+       + K + + +     +   +SP    + 
Sbjct: 125 LNTVNVSPDGSLCA-SGGRDGQAKLW--DIGSEEAKPLHTLEAGDEIYALTFSPNRYWL- 180

Query: 363 FTKFSGEKFAIGVMK----KDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGS 416
               +G    I  ++     D  +  ++ +    +  +  WS  G++L FS   DG    
Sbjct: 181 -CAAAGGIIKIWDLEQKNLVDELKPEVVADGGRAECISLCWSSDGQTL-FSGYNDGQ--I 236

Query: 417 KLYSIDL 423
           +++S+ +
Sbjct: 237 RVWSMSI 243



 Score = 43.1 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 37/264 (14%), Positives = 87/264 (32%), Gaps = 38/264 (14%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                   RLWD+     +            R + HT   D+           ++R +  
Sbjct: 10  SGSWDATLRLWDLASGNTV-----------RRFVGHT--KDVLSVSFSP----DNRQILS 52

Query: 181 SESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +    +  + N++ V       N         + +   RFSP  Q     +   + +++V
Sbjct: 53  AARDRTIKLWNTVGVCKFTIQENCHT------EWVSCVRFSPLPQTPVIVSAGWDKLVKV 106

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-T 298
           +  +    +  +        +     S +G     S  +D    ++  D+ S   + L T
Sbjct: 107 W--NLTNCKLKRDYRGHTGYLNTVNVSPDGSLCA-SGGRDGQAKLW--DIGSEEAKPLHT 161

Query: 299 NTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQ----SNGSDQKRISQDKEASYFDPV 353
                 I A ++SP+  +    +   G  +++ ++     +    + ++    A      
Sbjct: 162 LEAGDEIYALTFSPN--RYWLCAAAGGIIKIWDLEQKNLVDELKPEVVADGGRAECISLC 219

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMK 377
           WS  G  + F+ ++  +  +  M 
Sbjct: 220 WSSDGQTL-FSGYNDGQIRVWSMS 242


>gi|297491350|ref|XP_002707838.1| PREDICTED: PCAF associated factor 65 beta-like [Bos taurus]
 gi|296472281|gb|DAA14396.1| PCAF associated factor 65 beta-like [Bos taurus]
          Length = 589

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/235 (11%), Positives = 66/235 (28%), Gaps = 22/235 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 337 VLRGHCGPVYSTRFLADSSGLLSCSEDM----SIRYWDLGSFTNTVLYQGHAYPVWDLDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+      ++    + P+S+ +   S   
Sbjct: 393 SP--HSLYFASASHDRTARLWSFDR--TYPLRIYAGHLADVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL----YSIDLNGRNETLIN 432
              L     N+ + T+SP    +  +   +      +     S   +G +  L+ 
Sbjct: 503 YKELRGHTDNITSLTFSPDSSLVASASMDNSVRVWDIRSSHCSTPADGSSSELVG 557



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 38/107 (35%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 438 SNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ----RLK 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +    + S   D ++ ++ +
Sbjct: 494 LWDLASGTLYKELRGHTDNITSLTFSPD-SSLVASASMDNSVRVWDI 539


>gi|257487805|ref|ZP_05641846.1| hypothetical protein PsyrptA_31318 [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 371

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 69/186 (37%), Gaps = 26/186 (13%)

Query: 260 ILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              PR   FSS+GK   +  +    +  ++++ ++ A ++      I    + +   ++ 
Sbjct: 193 NTGPRHLAFSSDGKFLYVVGEMSGTVTAFAINQKTGALKQTGEADGIPKRLNLAQGQARD 252

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              +D +      +  ++                    +P G  +  ++ +    ++  +
Sbjct: 253 ARNNDLKDDPTPRIWAAD-----------------IRLAPNGKWLFISERTTSSVSVFKI 295

Query: 377 KKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +    +   +    V++   +    SP+GR L+ S +K    GS  Y+I  NG  + +  
Sbjct: 296 EPASGKVTFVENYPVQEKQPRNIAVSPNGRWLLVSGEKSDKVGS--YAIAANGALQRVSE 353

Query: 433 TPAYAS 438
            P+   
Sbjct: 354 APSGKG 359


>gi|238024700|ref|YP_002908932.1| peptidase S9, prolyl oligopeptidase [Burkholderia glumae BGR1]
 gi|237879365|gb|ACR31697.1| Peptidase S9, prolyl oligopeptidase containing active site region
           [Burkholderia glumae BGR1]
          Length = 632

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/177 (11%), Positives = 55/177 (31%), Gaps = 23/177 (12%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS-----NATERLTNTLFINISASYSPDSSQIVFE 319
            S +G+      +    ++++   +            L++    ++S      + ++++ 
Sbjct: 33  LSPDGRHLSFLARHAGRLNLFVQAIDGQGRVHGEPRVLSHESARDVSGYVWKGNDRVLYV 92

Query: 320 SDREGKEQLYV--MQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIG 374
            D  G E  +V  +  +G     ++  D   +            +  +        F + 
Sbjct: 93  KDFGGDENYHVLSVPIDGGPAVDLTPYDGVRASIVDRLIDDDRHVLLSHNRRDATVFDVL 152

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
            +     +  L+ E+           G  L +     G       ++  +G N TL+
Sbjct: 153 RVDVITGEASLVAENP----------GNVLGWMTDHAGRLR---VAVSSDGVNRTLL 196



 Score = 39.6 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 12/139 (8%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNG-----SDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           SPD   + F +   G+  L+V   +G      + + +S +        VW    D + + 
Sbjct: 34  SPDGRHLSFLARHAGRLNLFVQAIDGQGRVHGEPRVLSHESARDVSGYVW-KGNDRVLYV 92

Query: 365 KFSGE--KFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLY 419
           K  G    + +  +  DG     L     ++A          R ++ S  +   T   + 
Sbjct: 93  KDFGGDENYHVLSVPIDGGPAVDLTPYDGVRASIVDRLIDDDRHVLLSHNRRDATVFDVL 152

Query: 420 SIDL-NGRNETLINTPAYA 437
            +D+  G    +   P   
Sbjct: 153 RVDVITGEASLVAENPGNV 171


>gi|169831717|ref|YP_001717699.1| hypothetical protein Daud_1565 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638561|gb|ACA60067.1| hypothetical protein Daud_1565 [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 386

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 67/215 (31%), Gaps = 26/215 (12%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               RV +            G   ++  AP    +G R       +    I+  D ++ A
Sbjct: 85  RSGDRVTVFRQYTGETFTLGGTAWNVWPAP----DGSRVAY----NNEQGIWVADTKTGA 136

Query: 294 TE-RLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
               +        +     ++PDS++ +F  + E   + +V++  G   +  ++ +    
Sbjct: 137 DTLVVARDPQRETAPGGVIWAPDSTRFLFTYEHEWDSEFFVVEPGGEPSRLDTEMENYFL 196

Query: 350 FDPVWSPQGDLIAFTKF------------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
              V  P  D + FT              SG +    V          + + ++    T+
Sbjct: 197 KAAVAWPVADRVLFTVRASAKKDGTREYGSGYRSDFAVYDISDGSFERITDLNDGCFITF 256

Query: 398 --SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             S +     +  + +     +   +D  GR    
Sbjct: 257 EGSAAEGRFAYLIRDEQQRPLETGLMDTEGRGVNR 291


>gi|156844814|ref|XP_001645468.1| hypothetical protein Kpol_1061p35 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156116131|gb|EDO17610.1| hypothetical protein Kpol_1061p35 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 438

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 18/113 (15%)

Query: 338 QKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL------VED 389
            +R+S   E         +SP GD +A    +G      +   D  +   +         
Sbjct: 16  PERLSHTLENPLHTECIKFSPVGDYLALGSSNGGVI---IYDMDTFKPITVLGTNMGSHT 72

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            ++Q+ +WSP GR +I S +   D   KL+ +D  G+N++ ++  +    P W
Sbjct: 73  RSIQSISWSPCGRYIITSSR---DWFVKLWDLDDPGKNKSELSFDS----PVW 118



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 37/95 (38%), Gaps = 10/95 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDT--RIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +FSP    +A  +      + +Y MDT   I      +G+    I +  +S  G+   I+
Sbjct: 33  KFSPVGDYLALGS--SNGGVIIYDMDTFKPITVLGTNMGSHTRSIQSISWSPCGRYI-IT 89

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             +D  + ++ +D        L+       S  ++
Sbjct: 90  SSRDWFVKLWDLDDPGKNKSELSFD-----SPVWN 119


>gi|111222721|ref|YP_713515.1| serine/threonine-protein kinase [Frankia alni ACN14a]
 gi|111150253|emb|CAJ61950.1| putative serine/threonine-protein kinase pkwA; WD40 domains
           [Frankia alni ACN14a]
          Length = 782

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 56/165 (33%), Gaps = 13/165 (7%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYL---TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             +G     L  M  D A+ R            ++   FS + + +A  + D    L   
Sbjct: 623 GPAGDNSVGLWDM-SDLAHPRMFGRPLSGHRGSVYGIAFSTDLRTLATGSKDTTVRLWDI 681

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---- 296
                     + +    S + +  FS +G+    S   D+ + ++  D+   A  R    
Sbjct: 682 TDPAAPAPLGRALSGHTSTVWSVAFSPDGRTLA-SASFDQTIRLW--DVTDRAHPRPLGP 738

Query: 297 -LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            L+       S ++SPD   +     R+   +L+ + +      R
Sbjct: 739 PLSGHTDFVQSVAFSPDGRLLA-SGGRDHTIRLWTIPAGSRAAGR 782



 Score = 37.3 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 70/243 (28%), Gaps = 27/243 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P R   +    FSP+ + +A   +D      V L D      P            P  S
Sbjct: 509 LPGRTDGVVSLAFSPDSRLLASGNWDA----TVRLWDVSDPAHPHPPTMVPPADAGPVSS 564

Query: 267 ----SNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINIS---ASYSPDSSQIVF 318
                +  R L+    D  + ++ V D           T   + S      +P+ + +  
Sbjct: 565 VEFYRD-DRTLVESNTDGVVRVWDVSDPAHPQPRSRFPTGHTDNSWARPVLAPNGTVLA- 622

Query: 319 ESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                G   + +   +     R+          S +   +S     +A            
Sbjct: 623 --GPAGDNSVGLWDMSDLAHPRMFGRPLSGHRGSVYGIAFSTDLRTLATGSKDTTVRLWD 680

Query: 375 VMKKDGSQE--RLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +          R L    S + +  +SP GR+L        D   +L+ +  +  +   +
Sbjct: 681 ITDPAAPAPLGRALSGHTSTVWSVAFSPDGRTLA---SASFDQTIRLWDV-TDRAHPRPL 736

Query: 432 NTP 434
             P
Sbjct: 737 GPP 739



 Score = 36.9 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 73/212 (34%), Gaps = 22/212 (10%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPK---RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
              + + ++RV+ +       P+     G+  +    P  + NG         D ++ ++
Sbjct: 575 VESNTDGVVRVWDVSDPAHPQPRSRFPTGHTDNSWARPVLAPNGTVLA-GPAGDNSVGLW 633

Query: 286 SV-DLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM--QSNGSDQKR 340
            + DL         L+         ++S D   +     ++   +L+ +   +  +   R
Sbjct: 634 DMSDLAHPRMFGRPLSGHRGSVYGIAFSTDLRTLA-TGSKDTTVRLWDITDPAAPAPLGR 692

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLV-----EDSNLQA 394
                 ++ +   +SP G  +A   F      I +    D +  R L          +Q+
Sbjct: 693 ALSGHTSTVWSVAFSPDGRTLASASFDQT---IRLWDVTDRAHPRPLGPPLSGHTDFVQS 749

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             +SP GR L        D   +L++I    R
Sbjct: 750 VAFSPDGRLLA---SGGRDHTIRLWTIPAGSR 778



 Score = 36.5 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 55/163 (33%), Gaps = 10/163 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +    FS + + +A A+ D    L               +      +++  FS
Sbjct: 463 LTGHTNWVTSVAFSTDGRLLASASKDGTVRLWAVSDSAHAHALGPPLPGRTDGVVSLAFS 522

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDR 322
            +  R L S   D  + ++ V          T     +        +  D   +V ES+ 
Sbjct: 523 PD-SRLLASGNWDATVRLWDVS-DPAHPHPPTMVPPADAGPVSSVEFYRDDRTLV-ESNT 579

Query: 323 EGKEQLYVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDLIA 362
           +G  +++ +      Q R    +   + S+  PV +P G ++A
Sbjct: 580 DGVVRVWDVSDPAHPQPRSRFPTGHTDNSWARPVLAPNGTVLA 622


>gi|73671164|ref|YP_307179.1| hypothetical protein Mbar_A3737 [Methanosarcina barkeri str.
           Fusaro]
 gi|72398326|gb|AAZ72599.1| hypothetical protein Mbar_A3737 [Methanosarcina barkeri str.
           Fusaro]
          Length = 1682

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/235 (16%), Positives = 73/235 (31%), Gaps = 26/235 (11%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G     L  ++ DG  +++   +  Q+   P    +     Y      D+  +    T  
Sbjct: 289 GSNDKYLYGLNPDGT-LKWKYYAGAQLQCTPAIGTDGT--IYIESGYRDVYALNPNGTLK 345

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
                       +  +P   ++G          +   IY+++ +       T    +  S
Sbjct: 346 WSYN----GGEGVAGSPAIGADGT-IYFGTT--DNKKIYALNPEGTLRWSYTAGGNLGSS 398

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            +   D +  +  SD     +LY + S+G+  K            P     G  I F   
Sbjct: 399 PAIGADGTIYIGSSD----NKLYALNSDGT-LKWTYAITGNQIGSPAIGADGT-IYFGSN 452

Query: 367 SGEKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                 +  +  DG+ +    VE+  + +P     G   I      G    KLY+
Sbjct: 453 DN---KLYALNPDGTLKWTYAVENQIVSSPAIGADGTLYI------GSLDKKLYA 498


>gi|327393589|dbj|BAK11011.1| vegetative incompatibility protein HET-E-1 hypothetical protein
           [Pantoea ananatis AJ13355]
 gi|327395155|dbj|BAK12577.1| PQQ-dependent catabolism-associated beta-propeller protein [Pantoea
           ananatis AJ13355]
          Length = 333

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 67/225 (29%), Gaps = 51/225 (22%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
              +   S + K A+ S    E  D+   DL +    ++        +A +SPD  + V+
Sbjct: 37  HNNSLAVSPDEKTAVASYS--ERSDVVVYDLAAGKVRKVLKGYVTPRNALFSPDG-KAVY 93

Query: 319 ESD--------------------------------REGK---------EQLYVMQSNGSD 337
            SD                                R+G+           L V     + 
Sbjct: 94  LSDSSLGVVRKISTGTLDVETTLPLGAGAFGTAISRDGQRLYVNNEAASILSVYDLTHNR 153

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPT 396
              +             SP G  +  T F G+K  I ++       R  +   S L+A +
Sbjct: 154 PVSVVTGFAQPRQGIKISPDGKTVYVTNFKGDK--ITLVDAVTGDIRGEITGFSKLRAIS 211

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            S  GR+L ++     +T   +  +D   R  T            
Sbjct: 212 VSADGRTL-YAANSGSNT---IAVVDTQKRAITATIPVGQDPYGA 252



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 61/194 (31%), Gaps = 11/194 (5%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+    + L V D        +     Q     + SP+ + V    +      ++ L+D 
Sbjct: 136 VNNEAASILSVYDLTHNRPVSVVTGFAQPRQGIKISPDGKTVYVTNF---KGDKITLVDA 192

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                   I  F S + A   S++G+          +  I  VD Q  A           
Sbjct: 193 VTGDIRGEITGF-SKLRAISVSADGRTLY--AANSGSNTIAVVDTQKRAITATIPVGQDP 249

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             A+ +PD+  +   S   G   L V+ +            +A     V+S  G   A  
Sbjct: 250 YGAALTPDNRYVY--SGNLGDNSLSVIDTAAGKVVATVTGLDAPRQAIVFSKDG---ARA 304

Query: 365 KFSGEKFAIGVMKK 378
               +  +I V+  
Sbjct: 305 WVLNKDLSIAVVDL 318


>gi|307179174|gb|EFN67612.1| WD repeat-containing protein 26 [Camponotus floridanus]
          Length = 609

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 60/176 (34%), Gaps = 15/176 (8%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +       ++  +FSP+  K+A  + D   I+     +T      K +      +    
Sbjct: 282 QILNDHCDEVWYCKFSPDGLKLATGSKDMTVIIWDVDPETLKVTHRKTLEGHTYGVALIA 341

Query: 265 FSSNGKRALISVQKD-EAMDIYSVDLQSNATE-RLTNTLFIN-ISASYSPDSSQIVFESD 321
           +S +    +    +D   + +++VD        RLT     +  + ++  DS++ V    
Sbjct: 342 WSPDSSHLIACGPEDCPELWLWNVDTPDCELRVRLTQNTDDSLTACAWHRDSNKFVAGGL 401

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS-PQGDLIA----FTKFSGEKFA 372
           R    Q Y    +G+    +S   E      +W    G  +       +  G  F 
Sbjct: 402 RG---QFYQCDMDGN----VSDSWEGVRVKCLWCRSDGKTVLAADTHHRIRGYNFD 450


>gi|302923218|ref|XP_003053628.1| hypothetical protein NECHADRAFT_122274 [Nectria haematococca mpVI
           77-13-4]
 gi|256734569|gb|EEU47915.1| hypothetical protein NECHADRAFT_122274 [Nectria haematococca mpVI
           77-13-4]
          Length = 461

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 59/157 (37%), Gaps = 19/157 (12%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESD- 321
           R S NG+    S   D  + I+  D  + A  + L   +      +++PDS+ I   SD 
Sbjct: 176 RISPNGRFIA-SASADATVKIW--DAATGAHMDTLFGHMAGVSCLAWTPDSNTIASGSDD 232

Query: 322 --------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                     G+ +    ++    +    +          +SP+G+++A   +    F +
Sbjct: 233 KAIRLWDRVTGRPKTTARKTEAGQEMAPLKGHHNYIHCLAFSPKGNILASGSYDEAVF-L 291

Query: 374 GVMKKDGSQERLLVEDSNLQAPT-----WSPSGRSLI 405
             ++      + L    +   P      +SP+GR ++
Sbjct: 292 WDVRAGRLMRQCLRTLVHEDNPAVTNVCFSPNGRFVL 328


>gi|294865383|ref|XP_002764396.1| hypothetical protein Pmar_PMAR010663 [Perkinsus marinus ATCC 50983]
 gi|239863682|gb|EEQ97113.1| hypothetical protein Pmar_PMAR010663 [Perkinsus marinus ATCC 50983]
          Length = 314

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           Y  +  + G    RIL       S      L  MD              +++   +FSP+
Sbjct: 158 YNKMIKQTGGVGERIL-----SGSDDFTMFLWSMDSKCKKPLCRLTGHQKVVNNVQFSPD 212

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            + +A A++D      V L D    +    +    + +    +S++  R L+S  KD  +
Sbjct: 213 GRMIASASFDK----SVRLWDGVTGKFICALRGHVADVYMVSWSAD-SRMLVSGSKDSTV 267

Query: 283 DIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLY 329
            ++  D      +         + A  +S D +++V  + R+   +++
Sbjct: 268 KVW--DAGKRKLKEDLPGHADEVFAVDWSGDGARVV-SAGRDKVVKIW 312



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 54/152 (35%), Gaps = 8/152 (5%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
            +++   + D    + ++ MD++  +   R+   + ++   +FS +G+    S   D+++
Sbjct: 169 GERILSGSDDF--TMFLWSMDSKCKKPLCRLTGHQKVVNNVQFSPDGRMIA-SASFDKSV 225

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            ++   +       L   +      S+S DS  +V  S       + V  +     K   
Sbjct: 226 RLWD-GVTGKFICALRGHVADVYMVSWSADSRMLVSGSK---DSTVKVWDAGKRKLKEDL 281

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                  F   WS  G  +  +    +   I 
Sbjct: 282 PGHADEVFAVDWSGDGARVV-SAGRDKVVKIW 312


>gi|145614214|ref|XP_364055.2| hypothetical protein MGG_08900 [Magnaporthe oryzae 70-15]
 gi|145021156|gb|EDK05285.1| hypothetical protein MGG_08900 [Magnaporthe oryzae 70-15]
          Length = 516

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 42/227 (18%), Positives = 75/227 (33%), Gaps = 27/227 (11%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
              +    DI        ++        +    IL+ ++S + +  L++V    A  I+ 
Sbjct: 6   VSCSRSFSDISVRSTSSLQVVHIVDLPWDLSGPILSFKWSPSSQYLLVAV----AEQIHV 61

Query: 287 VDLQ-SNATERLTNTL--------FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              Q  +    +            FI+  A+   DS  I+F S      +L +     S 
Sbjct: 62  FSAQEGSNLHAIIRNPTPPAVKPCFIDFGAT---DSEVILFSSL---GLRLSIFNLKASK 115

Query: 338 QKRISQDKEASYFDPVWS----PQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSN 391
              IS  K  S      S    P    +A    +  K  + V   +  + +    ++  +
Sbjct: 116 TVEISSPKFYSISSAHKSFSIRPISRHLAVLTRTDGKDVVSVHHPETRECQRSWPLDTID 175

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
               TWSP GR L     +    G K+     +G    L + P + S
Sbjct: 176 ANGITWSPDGRWLA--AWESPAHGHKILFYTADGNLFKLWSGPHHKS 220



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 68/190 (35%), Gaps = 16/190 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF----S 266
              +   ++SP+ Q +  A  +   +                I N     + P F    +
Sbjct: 36  SGPILSFKWSPSSQYLLVAVAEQIHVFSAQ----EGSNLHAIIRNPTPPAVKPCFIDFGA 91

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYS--PDSSQIVFESD 321
           ++ +  L S      + +   +L+++ T  +++  F +IS+   S+S  P S  +   + 
Sbjct: 92  TDSEVILFSS---LGLRLSIFNLKASKTVEISSPKFYSISSAHKSFSIRPISRHLAVLTR 148

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +GK+ + V      + +R             WSP G  +A  +       I     DG+
Sbjct: 149 TDGKDVVSVHHPETRECQRSWPLDTIDANGITWSPDGRWLAAWESPAHGHKILFYTADGN 208

Query: 382 QERLLVEDSN 391
             +L     +
Sbjct: 209 LFKLWSGPHH 218


>gi|72255511|ref|NP_001026810.1| eukaryotic translation initiation factor 3 subunit B [Rattus
           norvegicus]
 gi|88909158|sp|Q4G061|EIF3B_RAT RecName: Full=Eukaryotic translation initiation factor 3 subunit B;
           Short=eIF3b; AltName: Full=Eukaryotic translation
           initiation factor 3 subunit 9; AltName: Full=eIF-3-eta
 gi|71051705|gb|AAH98728.1| Eukaryotic translation initiation factor 3, subunit 9 (eta) [Rattus
           norvegicus]
 gi|149035014|gb|EDL89734.1| eukaryotic translation initiation factor 3, subunit 9 (eta) [Rattus
           norvegicus]
          Length = 797

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 272 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 323

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 324 -----RWSPKGTYLATFHQRGIALWGGDKFKQIQRFSHQGVQLID---------FSPCER 369

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 370 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 427

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 428 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 487

Query: 430 LI 431
            +
Sbjct: 488 RV 489



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 454 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 513

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 514 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 566

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      +    + I    +       WSPQG  +          A+  +     
Sbjct: 567 APRISVSFYHVKSNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 626

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 627 TVMNIAEHYMASDVEWDPTGRYVV 650



 Score = 40.0 bits (92), Expect = 0.78,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 15/138 (10%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   ++FES     ++  +  ++  D   I +    +     WSP+G  +A     G   
Sbjct: 287 DQYSVIFES----GDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRG--- 339

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGRN 427
            I +   D  ++        +Q   +SP  R L+        +D      ++ I L G  
Sbjct: 340 -IALWGGDKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDI-LTGHK 397

Query: 428 ETLINTPAYASDP--QWV 443
           +   +  + A  P  +W 
Sbjct: 398 KRGFHCESSAHWPIFKWS 415


>gi|295106704|emb|CBL04247.1| 3-carboxymuconate cyclase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 371

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 6/89 (6%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FS 266
            D     P FSP+ +++ Y +    D  R+ L     D A   + +       PR    S
Sbjct: 269 GDVRAAHPAFSPDGRRL-YVSVRGSD--RLTLFGIDRDGAATPLADCPCGGRGPRHFSLS 325

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE 295
             G+   ++ Q  + + ++++D  ++   
Sbjct: 326 PEGRHLAVANQGSDEVVLFALDPATDEPR 354



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 32/81 (39%), Gaps = 4/81 (4%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVF 318
            P FS +G+R  +SV+  + + ++ +D    A   L +           S SP+   +  
Sbjct: 275 HPAFSPDGRRLYVSVRGSDRLTLFGIDRD-GAATPLADCPCGGRGPRHFSLSPEGRHLAV 333

Query: 319 ESDREGKEQLYVMQSNGSDQK 339
            +    +  L+ +     + +
Sbjct: 334 ANQGSDEVVLFALDPATDEPR 354



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 33/253 (13%), Positives = 70/253 (27%), Gaps = 32/253 (12%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR-----------IDRAPKRIGNFRSM 259
           D         P+ + +  A Y+   +    L                   P         
Sbjct: 113 DAGTCFATVHPDGRCLYGANYESGSVGLCLLDANGNPCGGLPSIRHAGSGPNCARQSAPH 172

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE------RLTNTLFINISASYSPDS 313
           + + RF        +     + + +Y  +             R+          ++ P  
Sbjct: 173 VHSARFVPGTGLLAVVDLGTDTVTLYRAEATGTLETPPVETVRVPPGSGP-RMLAFHPRL 231

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQ------DKEASYFDPVWSPQGDLIAFTKFS 367
                 ++      LY     G+  ++  +        +     P +SP G  +  +   
Sbjct: 232 PLAALVNELANDVLLYRYDRAGTGWEQTGRLELPVVPGDVRAAHPAFSPDGRRLYVSVRG 291

Query: 368 GEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            ++  +  + +DG+   L          +  + SP GR L  +    G     L+++D  
Sbjct: 292 SDRLTLFGIDRDGAATPLADCPCGGRGPRHFSLSPEGRHLAVA--NQGSDEVVLFALDPA 349

Query: 425 G---RNETLINTP 434
               R E  I  P
Sbjct: 350 TDEPREEARIAVP 362


>gi|316932406|ref|YP_004107388.1| WD40 repeat, subgroup [Rhodopseudomonas palustris DX-1]
 gi|315600120|gb|ADU42655.1| WD40 repeat, subgroup [Rhodopseudomonas palustris DX-1]
          Length = 339

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/177 (15%), Positives = 70/177 (39%), Gaps = 21/177 (11%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESDREGK 325
           +GKR +      +   +  +D    +    T+    +I+ + +  PD + + + +     
Sbjct: 73  DGKRIV---TGGDDGKVMLLDGSGKSETFATDAKRRWID-NVALHPDGA-VAWSA----- 122

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            ++  +++  ++ K  S +  ++     ++P+G  +A   ++G    +      G+ E L
Sbjct: 123 GKIAYVRAPKAEDK--SFEVPSTVGGLAFAPKGLRLAIAHYNG--VTLWFPNMAGNAEVL 178

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
               S+L    +SP  R L+ +  +    G +L     + ++  +   P       W
Sbjct: 179 EWAGSHLGV-MFSPDNRFLVTAMHEPALHGWRL----ADSKHMRMTGYPGRVRSMAW 230


>gi|196015599|ref|XP_002117656.1| hypothetical protein TRIADDRAFT_32827 [Trichoplax adhaerens]
 gi|190579825|gb|EDV19914.1| hypothetical protein TRIADDRAFT_32827 [Trichoplax adhaerens]
          Length = 293

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 64/193 (33%), Gaps = 28/193 (14%)

Query: 181 SESVVSGIIKNSLCVMDRDGAN---IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +  VV+G    +L V   D  N   IR +                   +    YD     
Sbjct: 102 TGRVVTGSNDRTLKVW--DLKNRACIRTIFAGSSCNDLV-TIDGVGANIISGHYDK---- 154

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+   D R + +   I      + +   S +G   L S  +D+ + +  + +      ++
Sbjct: 155 RIRFWDIRSESSCNEIT-LHGKVTSLSLSPDGTYLL-SSSRDDMLKLIDLRMN-----QV 207

Query: 298 TNTLFINIS--------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           T T   +          A +SPD   +   S       ++V  +N +  ++  ++     
Sbjct: 208 TGTFCSDGFRLALDYCRACFSPDGQYVTCGSF---DGTVFVWNTNSTRVEKTLKEHTNPV 264

Query: 350 FDPVWSPQGDLIA 362
               W PQG  I 
Sbjct: 265 IACTWHPQGTHIV 277


>gi|167518576|ref|XP_001743628.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777590|gb|EDQ91206.1| predicted protein [Monosiga brevicollis MX1]
          Length = 378

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 66/206 (32%), Gaps = 20/206 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--- 263
           +    + +   RF+ +   +A +  D      V + +   +   +          A    
Sbjct: 87  SNGHSKTIHGLRFNADGTLLASSGIDK----LVIVHEPGTNGQFEEAVKLEGHTSAVDQV 142

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            F       L S   D+++ ++ V  +   T  +T     NI+  + PD + +       
Sbjct: 143 AFHPQNTNILASASDDKSVKLWDVRAKQRETTSVTTDDG-NINLKWHPDCNLLAV----- 196

Query: 324 GKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           G     +   +    + ++  + E       W+        T   G    + V+  +  +
Sbjct: 197 GNRSDVITLFDTRTWQALTTKQYEIEVNGLSWNNDATGFFLTTGRGS---VRVLHPETLE 253

Query: 383 ---ERLLVEDSNLQAPTWSPSGRSLI 405
              E L    SN  +  +SP GR   
Sbjct: 254 PLCEDLTAHTSNCLSIEFSPCGRYFA 279


>gi|163787470|ref|ZP_02181917.1| dipeptidyl aminopeptidase IV [Flavobacteriales bacterium ALC-1]
 gi|159877358|gb|EDP71415.1| dipeptidyl aminopeptidase IV [Flavobacteriales bacterium ALC-1]
          Length = 743

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 40/284 (14%), Positives = 97/284 (34%), Gaps = 56/284 (19%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDD---EDILRVYLMDTRIDRAPKRIGNF---- 256
           + +T   D ++ EP  SP+  K+AY   ++   +D+    +     D    +I N     
Sbjct: 130 KKVTKVSDDLVQEPTLSPDATKIAYGFQNNLYVKDLSSGTVEQITSDGEKNKIINGITDW 189

Query: 257 -----RSMILAPRFSSNGKRALI-------------------------------SVQKDE 280
                 S + A  ++++  +                                  + + + 
Sbjct: 190 VYEEEFSFVRAFDWNADSNQIAFIRFDESEVPEFSMDVFGSNLYQTQQVFKYPKAGEANS 249

Query: 281 AMDIYSVDLQSNATERLTNTLFINIS--AS--YSPDSSQIV--FESDREGKEQLYVMQSN 334
            + ++  DL SN  + L      N        ++ D+  +   + +  + +  L+++ + 
Sbjct: 250 KVSLHLYDLNSNKIQTLKVDKAYNDFYIPRIEWTKDADVLSVQYMNRHQNELDLWMINTK 309

Query: 335 GSDQKRISQDKEASYFDPVWS----PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                 +  +K+ +Y D  ++         I +T        I    KDG     +    
Sbjct: 310 SMTSDLVLAEKDKAYIDVTFNLTFLKDNSFI-WTSEKDGYNHIYHYAKDGELINQVTNGD 368

Query: 391 NLQAPTWSPSGR--SLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                 +  + +  ++ +   ++G     +YSI LNG+N+  + 
Sbjct: 369 WEVTNYYGFNEKANTIYYQSVENGSINRDVYSIKLNGKNKKRLT 412



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 12/113 (10%), Positives = 40/113 (35%), Gaps = 4/113 (3%)

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA- 372
           +  ++ S+++G   +Y    +G    +++           ++ + + I +          
Sbjct: 337 NSFIWTSEKDGYNHIYHYAKDGELINQVTNGDWEVTNYYGFNEKANTIYYQSVENGSINR 396

Query: 373 -IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +  +K +G  ++ L +       ++S       F       T    Y+++ +
Sbjct: 397 DVYSIKLNGKNKKRLTKTDGTNNASFSAD--FTYFINTHSSATSPPEYTLNSS 447


>gi|146423322|ref|XP_001487591.1| hypothetical protein PGUG_00968 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 699

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 75/229 (32%), Gaps = 22/229 (9%)

Query: 198 RDGAN--IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           RD  N  I          ++   FSP+   VA A+ D    +R++ +D+       +   
Sbjct: 433 RDPHNNDISRRLVGHSGPVYNVAFSPDNHYVASASED--KSVRLWSLDSYTGLVAYKGHT 490

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSS 314
               +    FS  G     +   D+   ++  D       R+      ++    + P+S+
Sbjct: 491 AP--VWDVAFSPWGHYFA-TASHDQTARLWGTDHIY--ALRIFAGHINDVECVQFHPNSN 545

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             VF    +   +++       +  RI             SP G  +A    +GE   + 
Sbjct: 546 Y-VFTGLADKTCRMW--DVQSGNCVRIFMGHTGPVNCMAVSPDGRWLA---SAGEDSVVN 599

Query: 375 VMK-KDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
           +     G + + +         +  WS  G  ++       D   +++ 
Sbjct: 600 LWDCNSGRRIKAMRGHGRNSIYSLAWSREGNVVV---SSGADNTVRVWD 645


>gi|147919611|ref|YP_686649.1| hypothetical protein RCIX2203 [uncultured methanogenic archaeon
           RC-I]
 gi|110622045|emb|CAJ37323.1| hypothetical protein RCIX2203 [uncultured methanogenic archaeon
           RC-I]
          Length = 705

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 88/280 (31%), Gaps = 43/280 (15%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
           + +FV+    +        V   D  N    T            SP+  + AY T ++  
Sbjct: 382 KKIFVASRGGN-------TVTIVDTGNHTTDTLKLWWDPQYIALSPDGTR-AYVTSENSG 433

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNA- 293
            + V     R   A   +G     I     S +GK+A ++  + D   D     + +   
Sbjct: 434 TVTVINTTDRATVAIIDVGETPREI---EVSPDGKKAYVTHYRNDWQTDGMLTVIDTGTC 490

Query: 294 --TERLTNTLFINISASYSPDSSQIVFE------------------SDREGKEQLYVMQS 333
              ++LT  +      ++SP   ++                      D    + LY++ +
Sbjct: 491 TVIKKLTVGV-NPGGMAFSPAGDRLYIVCQIPALMMLNPYGHEVESVDSGKSDSLYIIDT 549

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---EKFAIGVMKK-DGSQERLLVED 389
              D    + D      D   SP G L+  T  +G   +K  + V+     +Q  ++   
Sbjct: 550 E-RDVVMDTSDVRYMPRDIAVSPDGSLLYVTCMNGSMTDKGNVRVLDARSYAQTGVIDVG 608

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
                   +P G+ L             L  ID    N T
Sbjct: 609 PEPNGIVATPDGKYLYVVT----PADYSLTVIDAAAGNVT 644



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 73/224 (32%), Gaps = 39/224 (17%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+++K+  A+        V ++DT           +    +A   S +G RA ++ +  
Sbjct: 378 SPDRKKIFVAS---RGGNTVTIVDTGNHTTDTLKLWWDPQYIA--LSPDGTRAYVTSENS 432

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR-EGKEQLYVMQSNGSDQ 338
             +    ++    AT  + +          SPD  +      R + +    +   +    
Sbjct: 433 GTVT--VINTTDRATVAIIDVGETPREIEVSPDGKKAYVTHYRNDWQTDGMLTVIDTGTC 490

Query: 339 KRISQDKEA-SYFDPVWSPQGDLIAFTKF------------------SGEKFAIGVMKK- 378
             I +     +     +SP GD +                       SG+  ++ ++   
Sbjct: 491 TVIKKLTVGVNPGGMAFSPAGDRLYIVCQIPALMMLNPYGHEVESVDSGKSDSLYIIDTE 550

Query: 379 -----DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                D S  R +  D  +     SP G SL++    +G    K
Sbjct: 551 RDVVMDTSDVRYMPRDIAV-----SPDG-SLLYVTCMNGSMTDK 588



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 59/188 (31%), Gaps = 15/188 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP   ++    +   +I  +      +  + + I +   +      S +G    +   + 
Sbjct: 41  SPPSPQLYVCNHQSRNISIIDTGSMTVAGSIEGISSPAGV----AVSPDGTILYVVGSQS 96

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-Q 338
             +    V+        +      + +   SPD S++      +    + V+ +      
Sbjct: 97  GTVSAIDVNA-GRVISNVKVGQGADRT-VISPDGSRLY----VKCGSNVSVVDTGTMQIA 150

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTW 397
             I+ D +A       SP G  +      G   +I V+     S    +   S   + T 
Sbjct: 151 GTITTDGKA-LRGMALSPDGSRLYVADLKGG--SILVIDTVACSVTETVALASLPMSLTV 207

Query: 398 SPSGRSLI 405
           SP G  + 
Sbjct: 208 SPDGSRIY 215



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 57/206 (27%), Gaps = 37/206 (17%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
                  +DI  +Y++D+      + I N   +      S +G R   +  +     +  
Sbjct: 247 WITGSSQKDINGIYIIDSVNYSVIRTI-NTGGIPFGMALSEDGSRLYAACAEHYGSYVTV 305

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG------KEQLYVMQSNGS---- 336
           +D  +            + +           + S R+G        + YV+ + GS    
Sbjct: 306 IDPSTGEMT--------DKTPV--QIGLWTTY-SLRDGVDALSDGSRFYVLPAAGSMLFS 354

Query: 337 -DQKRISQDKEASYFDPVW----SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-S 390
            +Q  ++  +             SP    I      G    I     D        +   
Sbjct: 355 IEQASLTPGQPVQVGADSVGMCLSPDRKKIFVASRGGNTVTI----VDTGNH--TTDTLK 408

Query: 391 NLQAPTW---SPSGRSLIFSRKKDGD 413
               P +   SP G     + +  G 
Sbjct: 409 LWWDPQYIALSPDGTRAYVTSENSGT 434



 Score = 36.9 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 27/170 (15%), Positives = 55/170 (32%), Gaps = 34/170 (20%)

Query: 218 RFSPNQQKVAYA-----------------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            FSP   ++                    + D      +Y++DT  D       + R M 
Sbjct: 506 AFSPAGDRLYIVCQIPALMMLNPYGHEVESVDSGKSDSLYIIDTERD-VVMDTSDVRYMP 564

Query: 261 LAPRFSSNGKRALIS---VQKDEAMDIYSVDLQSNATERLTNTLFINISASYS-----PD 312
                S +G    ++       +  ++  +D +S A      T  I++    +     PD
Sbjct: 565 RDIAVSPDGSLLYVTCMNGSMTDKGNVRVLDARSYA-----QTGVIDVGPEPNGIVATPD 619

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLI 361
              +   +  +    L V+ +   +   +IS       +    SP+GD +
Sbjct: 620 GKYLYVVTPAD--YSLTVIDAAAGNVTAKISFGTYNKPYGITISPRGDRV 667


>gi|87301354|ref|ZP_01084195.1| putative peptidase [Synechococcus sp. WH 5701]
 gi|87284322|gb|EAQ76275.1| putative peptidase [Synechococcus sp. WH 5701]
          Length = 640

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 63/206 (30%), Gaps = 38/206 (18%)

Query: 268 NGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE------ 319
           +G+R      ++      + +V L+    + L   L     A  SPD  ++ +       
Sbjct: 119 DGRRRRWIGVMEARGLDQLVAVPLEGGEPQLLRQALDFCGYAVLSPDGGRLAWVEWQQPH 178

Query: 320 --SDREGKEQLYVMQSNGSDQKRISQDKEA-------SYFDPVWSPQGDLIAFTKFSGEK 370
              DR       V+   G    R+     A       S F P+W   G+L+         
Sbjct: 179 MPWDRSQLWLADVLPGGGLGPARLIAGSGAAEQPAACSVFQPLWLANGELVV-ANDRHGW 237

Query: 371 FAIGVMKKDGSQE--RLLVEDSNLQAPTW-------SPSGRSLIFSRKKDGDTGSKLYSI 421
           + +  +   G+     LL  ++    P W       +  G  L+ +    G         
Sbjct: 238 WNLERLDAAGTGPWQWLLPMEAEFAMPQWVYGMRTTAWDGHQLVAAACVQGRWQL----- 292

Query: 422 DLNGRNETLINTPAYASDPQ---WVG 444
              GR    +  PA   +P    W  
Sbjct: 293 ---GRVLLNVQNPAGGKEPAPACWEP 315



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 40/314 (12%), Positives = 89/314 (28%), Gaps = 42/314 (13%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           + R   H     +        G     ++ V       + +      D+ GA    LT  
Sbjct: 52  NLRSRVHEYGGGVVAVDRETAGPSAGELVVVVNDRDRCLWRLE---TDQPGAAPMRLTEP 108

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            ++   +     + ++  +    +   L   +        P+ +            S +G
Sbjct: 109 GERAFADGLI--DGRRRRWIGVMEARGLDQLVAVPLEGGEPQLLRQALDFCGYAVLSPDG 166

Query: 270 KRALISVQK-----DEAMDIYSVDL---QSNATERLTNTLFINISAS--------YSPDS 313
            R      +      +   ++  D+         RL          +        +  + 
Sbjct: 167 GRLAWVEWQQPHMPWDRSQLWLADVLPGGGLGPARLIAGSGAAEQPAACSVFQPLWLANG 226

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-------SPQGDLIAFTKF 366
            ++V  +DR G   L  + + G+   +     EA +  P W       +  G  +     
Sbjct: 227 -ELVVANDRHGWWNLERLDAAGTGPWQWLLPMEAEFAMPQWVYGMRTTAWDGHQLVAAAC 285

Query: 367 SGEKFAIG-----VMKKDGSQERLLVEDSNLQAPT------WSPSGRSLIFSRKKDGDTG 415
              ++ +G     V    G +E        +  P       W+  G+ +  +    G T 
Sbjct: 286 VQGRWQLGRVLLNVQNPAGGKEPAPACWEPIPCPFDDLEGLWAEDGQLVAVAAN--GSTE 343

Query: 416 SKLYSIDLNGRNET 429
           + L S++L      
Sbjct: 344 AGLLSLELASGRWR 357


>gi|307203019|gb|EFN82235.1| WD repeat-containing protein 35 [Harpegnathos saltator]
          Length = 1186

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 63/183 (34%), Gaps = 20/183 (10%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + ++ +       +      ++    +S + QK+     D   I+     +    +  K 
Sbjct: 101 VWMLYKGSWYEEMINNRNKSVVKGMAWSCDGQKICIVYEDGAVIVGSVDGNRIWGKELKN 160

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEA----------MDIYSVDLQSNATERLTNTLF 302
           I      + A ++S +GK  L  ++  E             +  + L ++  + +    +
Sbjct: 161 IA-----LSAVQWSPDGKLLLFGLKNGEVHLYDNQGVFLTKLNVLSLNTSQLQTIMALQW 215

Query: 303 INISASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +    Y   D   +     R G+ QL     + +D   I+ +   +     W+  G L+
Sbjct: 216 YDGKNGYVAIDCPTLAIC-YRNGRIQLMR---DTNDDNPITMETGLTASWCCWNSCGSLL 271

Query: 362 AFT 364
           A T
Sbjct: 272 AVT 274


>gi|297822807|ref|XP_002879286.1| hypothetical protein ARALYDRAFT_482009 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297325125|gb|EFH55545.1| hypothetical protein ARALYDRAFT_482009 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 378

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 82/235 (34%), Gaps = 48/235 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALI 274
            +SP+   VA       +  +V++  +      +R+        ++    +SS   + + 
Sbjct: 17  AWSPDHSMVALC----PNNTQVHIYKSSSQDQWERLHVLQKHDQIVSGIDWSSKSNKIV- 71

Query: 275 SVQKDEAMDIYSVDLQSNATE------RLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           SV  D    ++S+D             RL N   + +   +SP  ++    S   G + +
Sbjct: 72  SVSHDRNSYVWSLD--GGEWVPTLVILRL-NRAALCVQ--WSPKENKFAVGS---GAKTV 123

Query: 329 YVMQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGS- 381
            +      +     K I +  E+S     W P   L+A T   G    F+  +   D   
Sbjct: 124 CICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVDTKD 183

Query: 382 -----------QERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                       E++L  D   S      WSPSG +L +         S +Y +D
Sbjct: 184 SKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYV-----GHSSMIYFVD 233



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 37/233 (15%), Positives = 74/233 (31%), Gaps = 26/233 (11%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H  ++ I  +      D +   L  + + V     +S     +D     ++    DQI+ 
Sbjct: 7   HRFAESI--TCHAWSPDHSMVALCPNNTQVHIYKSSS-----QDQWERLHVLQKHDQIVS 59

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN------- 268
              +S    K+   ++D      V+ +D         I       L  ++S         
Sbjct: 60  GIDWSSKSNKIVSVSHDRNS--YVWSLDGGEWVPTLVILRLNRAALCVQWSPKENKFAVG 117

Query: 269 --GKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDRE 323
              K   I   + E     S  ++      +T+        + A+ S D    VF +  +
Sbjct: 118 SGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNILLATTSTDGKCRVFSTFIK 177

Query: 324 G-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           G      +     ++   +Q        +  F   WSP G+ +A+   S   +
Sbjct: 178 GVDTKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIY 230


>gi|285016872|ref|YP_003374583.1| hypothetical protein XALc_0051 [Xanthomonas albilineans GPE PC73]
 gi|283472090|emb|CBA14597.1| hypothetical protein XALc_0051 [Xanthomonas albilineans]
          Length = 224

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 17/99 (17%)

Query: 34  AFVKVATNSANYSPVSIAFTKFV------------SIDELGGKVSEVVSKDLQRSDVFNL 81
           A   +  + A      IA  KF               D LG +   ++  DLQ+++ F +
Sbjct: 35  AAANIPYSGARA---PIAVGKFDNRSSFMRGLFSDGADRLGSQAKTILITDLQQTNRFRV 91

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           + +D+  +     D   + Q     GA  ++TG V + G
Sbjct: 92  LDRDNMGEIKQEADIKRQAQQLK--GADYVITGDVTEFG 128


>gi|239944979|ref|ZP_04696916.1| WD-40 repeat-containing protein [Streptomyces roseosporus NRRL
           15998]
 gi|239991442|ref|ZP_04712106.1| WD-40 repeat-containing protein [Streptomyces roseosporus NRRL
           11379]
 gi|291448439|ref|ZP_06587829.1| WD-40 repeat protein [Streptomyces roseosporus NRRL 15998]
 gi|291351386|gb|EFE78290.1| WD-40 repeat protein [Streptomyces roseosporus NRRL 15998]
          Length = 953

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 63/192 (32%), Gaps = 17/192 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--ILAPRFSSNGKRALIS 275
            FS +   +A  T        V L        P+  G+  ++    A  F   G+  L+ 
Sbjct: 762 AFSADGTLLAAPTRTGG----VRLWRVARHAPPEPAGDLPAVKGTRALAFGPRGRTLLV- 816

Query: 276 VQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             +   +  + V        +             ++ P    +   + ++G+ +L+ +++
Sbjct: 817 GDETGTISTWDVSRPGRPVRQGVSARHTAAITGLAFHPGGELMA-TAGQDGRIRLWDVRN 875

Query: 334 NGS--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                +   +S      +    +SP G L+A     G    +  + + G   RL  E   
Sbjct: 876 MSRPVEITALSDGGLYPHATVGFSPDGRLLAIGDSRG--VRLWTVDRTGILRRLCAESPR 933

Query: 392 LQAPTWS---PS 400
           +    W+   P 
Sbjct: 934 ITPDRWAQYLPD 945



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 41/262 (15%), Positives = 82/262 (31%), Gaps = 27/262 (10%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D A+ R LT    + +     + +   +  A        R  + D      P  +G   S
Sbjct: 695 DPAHPRSLTGGAARTVGAKSLAVD-PVLPLAAARGGPGERAQVWDIGDPARPTLLGTLDS 753

Query: 259 MILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-------S 308
                    FS++G     +  +   + ++ V                ++ A       +
Sbjct: 754 AGDGGQDLAFSADGTLLA-APTRTGGVRLWRV------ARHAPPEPAGDLPAVKGTRALA 806

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + P    ++   D  G    + +   G   ++ +S    A+     + P G+L+A     
Sbjct: 807 FGPRGRTLL-VGDETGTISTWDVSRPGRPVRQGVSARHTAAITGLAFHPGGELMATAGQD 865

Query: 368 GEKFAIGVMKKDG-SQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           G      V       +   L +       T  +SP GR L          G +L+++D  
Sbjct: 866 GRIRLWDVRNMSRPVEITALSDGGLYPHATVGFSPDGRLLA----IGDSRGVRLWTVDRT 921

Query: 425 GRNETLINTPAYASDPQWVGFM 446
           G    L       +  +W  ++
Sbjct: 922 GILRRLCAESPRITPDRWAQYL 943



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 61/199 (30%), Gaps = 31/199 (15%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L D      P    + +    A  FS +GKR  +    D  + +  V       E L  T
Sbjct: 324 LFDPARGTQPVFTESGKREATAVAFSPDGKRLALGG-PDGTVRLLDV-TDGGRPEALAET 381

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQ------SNGSDQKRISQDKEASYFDPVW 354
             +      S     +V  S      +L+ M        + SD  R         +    
Sbjct: 382 SAVGNRGEIS----VLVLTS----GGRLFAMTWKTGAVLDVSDPARPRPLGPLPSYPVAA 433

Query: 355 SPQGDLIAFTKFSGEK---FAIGVMKKDGSQERLLVE---------DSNLQAPTWSPSGR 402
           SP GDLI   +          + +    GS     V              Q   +SPSG 
Sbjct: 434 SPDGDLIVTEERDAGAGYLGHLRLWSVSGSGRPRPVAKFASPPVDLSEASQRVVFSPSGP 493

Query: 403 SLIFSRKKDGDTGSKLYSI 421
            L  +   D ++  +L+ +
Sbjct: 494 LLAVA---DEESRVRLWDV 509



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/224 (14%), Positives = 73/224 (32%), Gaps = 29/224 (12%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD------EAMDIYSVDLQSNAT 294
           ++D      P+ +G   S  +A   S +G   +++ ++D        + ++SV   S   
Sbjct: 411 VLDVSDPARPRPLGPLPSYPVAA--SPDGD-LIVTEERDAGAGYLGHLRLWSVS-GSGRP 466

Query: 295 ERLTNTLFINISAS-------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKR--ISQDK 345
             +       +  S       +SP    +   +D E + +L+ +        R  +    
Sbjct: 467 RPVAKFASPPVDLSEASQRVVFSPSGPLLA-VADEESRVRLWDVADPARPVARADLHTQS 525

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRS 403
               +   +SP    +A     G      V      +   L+          ++ P G +
Sbjct: 526 RFGIYSVAFSPDATTLATGDSDGTVALWDVSDPLRPRSGALLSGHAKAVAGLSFGPDGHT 585

Query: 404 LIFSRKKD-------GDTGSKLYSIDLNGRNETLINTPAYASDP 440
           +  +   D       G    +L+++  + R       PA  + P
Sbjct: 586 VASADGYDTLFDNGKGARTVRLWAVSGSARTSAFTALPAEGTFP 629


>gi|169642580|gb|AAI60901.1| Taf5l protein [Rattus norvegicus]
          Length = 589

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 69/240 (28%), Gaps = 26/240 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDM----SIRYWDLGSFTNTVLYQGHAYPVWDVDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+      ++    + P+S+ +   S   
Sbjct: 393 SP--YSLYFASGSHDRTARLWSFDR--TYPLRIYAGHLADVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              L     ++ +  +SP    +  +     D   +++ I       T  NTPA  S  +
Sbjct: 503 FKELRGHTDSITSLAFSPDSGLIASASM---DNSVRVWDI-----RSTCCNTPADGSSGE 554



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 438 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQ----RLK 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 494 LWDLASGTLFKELRGHTDSITSLAFSPDSGLIA-SASMDNSVRVWDI 539


>gi|330995914|ref|ZP_08319809.1| peptidase, S9A/B/C family, catalytic domain protein [Paraprevotella
           xylaniphila YIT 11841]
 gi|329574253|gb|EGG55828.1| peptidase, S9A/B/C family, catalytic domain protein [Paraprevotella
           xylaniphila YIT 11841]
          Length = 735

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/218 (16%), Positives = 69/218 (31%), Gaps = 34/218 (15%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
                S  +G+    LC  +     I  + P  D      R S + +++   ++ D    
Sbjct: 15  AIPVHSNAAGLSLKELCAGEYAAKRIYGVNPLNDG-ESYSRLSDDHKQIITYSFKDGRQK 73

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQS 291
            V L D    R  K +      I+    S + K+ LI        +       Y  D+ +
Sbjct: 74  DV-LFDVATARDVK-LEKIDGYIM----SPDEKKMLIQTETKPIYRHSFTAVYYLYDIAN 127

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----- 346
                L++      S  +SPD + + F  D        V     + + +I++D       
Sbjct: 128 RTLSPLSDN-GPQQSPKFSPDGNLVGFVRD---NNLFLVKLLFNNSESQITKDGNFNEVI 183

Query: 347 ------------ASYFDPVWSPQGDLIAFTKFSGEKFA 372
                        +     ++    +IA+ ++   K  
Sbjct: 184 NGIPDWVNEEEFGTSRSFDFNADNTMIAWIRYDESKVN 221


>gi|330835543|ref|YP_004410271.1| peptidase S9 prolyl oligopeptidase [Metallosphaera cuprina Ar-4]
 gi|329567682|gb|AEB95787.1| peptidase S9 prolyl oligopeptidase [Metallosphaera cuprina Ar-4]
          Length = 583

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 62/161 (38%), Gaps = 20/161 (12%)

Query: 265 FSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           FS+NGKR ++S  +         +Y ++L +   +R+T      ++ + + +    +   
Sbjct: 157 FSTNGKRIVVSTSQPDDDVGLNALYELNLDNGEMKRITEKEGSIVALTMNENGEVAMLGH 216

Query: 321 DREGKE---QLYVMQSNGS--------DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           DR       +  ++   G             ++   + +    ++  +GD I      G 
Sbjct: 217 DRGKLPWAIREVILPEEGKRFVCGNTCGSTVLTDIFDGAKERLIF--RGDEILTLGQIGG 274

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
           +  I  +  DG  E+L      ++   +   G SL++S  +
Sbjct: 275 EVNIYRIS-DGKTEKLTHGQHVVRLFDY--DGESLVYSLTR 312


>gi|307312627|ref|ZP_07592259.1| 40-residue YVTN family beta-propeller repeat protein [Escherichia
           coli W]
 gi|306907329|gb|EFN37834.1| 40-residue YVTN family beta-propeller repeat protein [Escherichia
           coli W]
          Length = 326

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T       F    S +  K          +  +      ++ D  +++   
Sbjct: 83  ATGEIIQSITTGAHPDSFI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 140

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+        +I  ++  ++  E            +  +
Sbjct: 141 TGTSGKPGAWVMALSPDERTLLVPGA--GRGNIVRINTITHQKEDFPAGDARGTISAMRF 198

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ V     S   +      + Y     SP G  +A   +  +
Sbjct: 199 RPENGEVIFA-DSQGISRISVGDQQTSIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 255

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 256 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 304

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 305 SLDPQAIIRHPQYG 318


>gi|209525590|ref|ZP_03274128.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Arthrospira maxima CS-328]
 gi|209493923|gb|EDZ94240.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Arthrospira maxima CS-328]
          Length = 636

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 47/129 (36%), Gaps = 15/129 (11%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFSGEKFAIGVMKK 378
             L  +  N  +  +I       Y  P  S  G  + +         + G +  +  + +
Sbjct: 154 NTLISLNLNNPEDIQILATGADFYASPNLSQDGSRLCWICWYHPNMPWDGTELWVAEVTE 213

Query: 379 DGS-QERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           +G+  ++  V     ++   P WSP G  L F   +       LY +  + + E L   P
Sbjct: 214 NGTLDQQQRVAGGVQESIFQPQWSPDGT-LYFVSDRAN--WWNLYRVR-DQKIEPLFPLP 269

Query: 435 AYASDPQWV 443
           A    PQWV
Sbjct: 270 AEFGLPQWV 278



 Score = 43.1 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 39/306 (12%), Positives = 93/306 (30%), Gaps = 45/306 (14%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISD-----DIYQSITGE 169
           RV + G     V              G  +FS+ A  R     I+      +I       
Sbjct: 74  RVHEYGGGSYTVS------------EGTVYFSNFADGRIYRQAIASVAQPTEIVPEPITP 121

Query: 170 KGDFNSRILFVSESVVS-----------GIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +G+F    L +                 G   N+L  ++ +      +  +       P 
Sbjct: 122 EGNFRYADLLIDTRRGRLICVREDHSQPGEPVNTLISLNLNNPEDIQILATGADFYASPN 181

Query: 219 FSPNQQKVAYATYDDEDILRV--------YLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            S +  ++ +  +   ++              +  +D+  +  G  +  I  P++S +G 
Sbjct: 182 LSQDGSRLCWICWYHPNMPWDGTELWVAEVTENGTLDQQQRVAGGVQESIFQPQWSPDGT 241

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GK 325
                  +    ++Y V  +    E L           +    S   F S R       +
Sbjct: 242 -LYFVSDRANWWNLYRV--RDQKIEPLFPLPAEFGLPQWVFGMSTFGFISQRRLCCAYTQ 298

Query: 326 EQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ + +   + +++ S D   +Y   V      ++     + E  A+  +  +  +  
Sbjct: 299 NGIWSLATLDPETQQLRSFDVSYTYISSVKVHNNSILMLASSATEPTALVQLDLNAGEMN 358

Query: 385 LLVEDS 390
           ++   +
Sbjct: 359 VVRSST 364



 Score = 36.9 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 11/110 (10%)

Query: 297 LTNTLFINISASYSPDSSQIVFE-----SDREGKEQLYV--MQSNGS--DQKRISQDKEA 347
           L        S + S D S++ +      +      +L+V  +  NG+   Q+R++   + 
Sbjct: 170 LATGADFYASPNLSQDGSRLCWICWYHPNMPWDGTELWVAEVTENGTLDQQQRVAGGVQE 229

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           S F P WSP G  + F       + +  ++ D   E L    +    P W
Sbjct: 230 SIFQPQWSPDGT-LYFVSDRANWWNLYRVR-DQKIEPLFPLPAEFGLPQW 277


>gi|195127884|ref|XP_002008397.1| GI13472 [Drosophila mojavensis]
 gi|193920006|gb|EDW18873.1| GI13472 [Drosophila mojavensis]
          Length = 643

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 58/144 (40%), Gaps = 11/144 (7%)

Query: 199 DGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           DG  ++ +         ++  +FSP+  K+A  + D   I+          +  + +   
Sbjct: 313 DGFPMQTIQVLSDHCDEVWFCKFSPDGLKLATGSKDSTVIIWDVDPYKLTLKNRRVLDGQ 372

Query: 257 RSMILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPD 312
             + ++   +S + K  L+   +D + +++  ++       +  +  ++ S    ++S D
Sbjct: 373 AQLNVSFVSWSPDSKLILVGGTED-SHELFIWNVDDGKLV-VKFSQSLDDSLACGTFSRD 430

Query: 313 SSQIVFESDREGKEQLYVMQSNGS 336
            +  V       K QLY+   NG+
Sbjct: 431 GNHFVCG---GQKGQLYLCDLNGT 451



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 61/146 (41%), Gaps = 11/146 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLF-INISA-SYSPDSSQIVFES 320
           FS +G +   +  KD  + I+ VD    +    R+ +    +N+S  S+SPDS +++   
Sbjct: 335 FSPDGLKLA-TGSKDSTVIIWDVDPYKLTLKNRRVLDGQAQLNVSFVSWSPDS-KLILVG 392

Query: 321 DREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             E   +L++   +      + SQ  + S     +S  G+        G+K  + +   +
Sbjct: 393 GTEDSHELFIWNVDDGKLVVKFSQSLDDSLACGTFSRDGNHFV---CGGQKGQLYLCDLN 449

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
           G+      E   + +  +    ++++
Sbjct: 450 GTLIDSW-EGVRVNSVAFRADNKTIL 474


>gi|217979602|ref|YP_002363749.1| 40-residue YVTN family beta-propeller repeat protein [Methylocella
           silvestris BL2]
 gi|217504978|gb|ACK52387.1| 40-residue YVTN family beta-propeller repeat protein [Methylocella
           silvestris BL2]
          Length = 540

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 39/232 (16%), Positives = 78/232 (33%), Gaps = 19/232 (8%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N          +    + SP+ + V            +  +DTR +    R+     +
Sbjct: 61  GTNKVVAKIELGCLPANSQVSPDGKTVYAICQKSGSKENIAAIDTRTNAVAARV-QVAGI 119

Query: 260 ILAPRFSSNGKRALISVQKDEA----MDIYSVDLQSNATERLTNT-LFINISASYSPDSS 314
             +   S +GK   ++ +K+E      +I  +D  +N   R+T + L  N+ A    D  
Sbjct: 120 PNSIVISPDGKSVYVAYKKNEYGPLQDNIAVIDAATN---RVTGSILGRNVVA--GQDGK 174

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +I   S     + L V+ +             A       +P        +  G    + 
Sbjct: 175 RIYVGS----ADSLQVIDTATGKTVTTIPLGGAPDRL-AVTPDQKRAVVVRNLGPYSDLV 229

Query: 375 VMKKDGSQERLLVEDSNL---QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           ++  + +     V+ SN         +P G+ +  +    G    ++  IDL
Sbjct: 230 IVDLNLNVAAAAVDLSNFTQTYDLAINPDGQRVYVTGCVAGIDICEIGVIDL 281


>gi|13938120|gb|AAH07175.1| Eif3b protein [Mus musculus]
          Length = 641

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 116 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 167

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 168 -----RWSPKGTYLATFHQRGIALWGGDKFKQIQRFSHQGVQLID---------FSPCER 213

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 214 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 271

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 272 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 331

Query: 430 LI 431
            +
Sbjct: 332 RV 333



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 298 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 357

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 358 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 410

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      +    + I    +       WSPQG  +          A+  +     
Sbjct: 411 APRISVSFYHVKSNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 470

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 471 TVMNIAEHYMASDVEWDPTGRYVV 494



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 15/138 (10%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   ++FES     ++  +  ++  D   I +    +     WSP+G  +A     G   
Sbjct: 131 DQYSVIFES----GDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRG--- 183

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGRN 427
            I +   D  ++        +Q   +SP  R L+        +D      ++ I L G  
Sbjct: 184 -IALWGGDKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDI-LTGHK 241

Query: 428 ETLINTPAYASDP--QWV 443
           +   +  + A  P  +W 
Sbjct: 242 KRGFHCESSAHWPIFKWS 259


>gi|326622505|gb|EGE28850.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 342

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 72/235 (30%), Gaps = 18/235 (7%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 13  KQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 72

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPD-SSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
            Y +     A         +  S +  S D   + VF  S   G   + V +        
Sbjct: 73  AYRIAPDDGALT-FAAESALPGSPTHISTDHHGRFVFVGSYNAGN--VSVTRLQDGLPVE 129

Query: 341 ISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNL 392
           +    E          +P    +       ++  +  +  DG        E   VE +  
Sbjct: 130 LVDVVEGLDGCHSANITPDNRTLWVPALKQDRICLFTLSDDGHLVAQEPAEVNTVEGAGP 189

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
           +   + P+ R   +   +   +       + +G  E   TL   PA  SD +W  
Sbjct: 190 RHMVFHPN-RQYAYCVNELNSSVDVWQLKNPHGEIECVQTLDMMPADFSDTRWAA 243


>gi|315223626|ref|ZP_07865480.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287]
 gi|314946407|gb|EFS98402.1| OmpA/MotB domain protein [Capnocytophaga ochracea F0287]
          Length = 652

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 66/200 (33%), Gaps = 53/200 (26%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G + + +                    + T   F +            ++ SDR+ K++L
Sbjct: 170 GDKVVFAAANSGR-------ASKGGISQWTGESFYD------------LYISDRD-KQKL 209

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-- 386
              ++  S       + + +    V++  G  + FT+ +     IG   ++    ++L  
Sbjct: 210 SNKKTFSSAL-----NTKFNESTAVFTKDGKTVYFTRNNYINKKIGTNGENTILLKILKA 264

Query: 387 -----------------VEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLNGRNE 428
                                N+  P  SP  + L F+    G  G S ++ +++ G N+
Sbjct: 265 TKDENGDWGNVVEVPFNSNQYNVAHPALSPDEKYLYFASDMKGTLGSSDIFRVEILGNNK 324

Query: 429 T--------LINTPAYASDP 440
                    +INT    S P
Sbjct: 325 YSRPENLGDVINTSGRESFP 344


>gi|167524100|ref|XP_001746386.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775148|gb|EDQ88773.1| predicted protein [Monosiga brevicollis MX1]
          Length = 432

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 41/236 (17%), Positives = 79/236 (33%), Gaps = 16/236 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            +   V+   ++ L +       I    P+ DQI +   FS +     Y    +     V
Sbjct: 19  PNNDFVATTREHVLVIRHAHSFEIFQRRPAHDQIDYL-EFSADS---MYVMVANFKRALV 74

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            +          RI    + + A R+S +G+  L +      + ++S  L S     +  
Sbjct: 75  EVFSLEDPEWTCRIDEAATGLEAVRWSLDGRHVLTTSSFKLRITVWS--LVSPHVTYIKF 132

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                   S +P+   +     R+G++   ++ +           + +   D VWSP   
Sbjct: 133 PKHDQPGFSLAPNGRLMAVLERRQGRDYCSIISTEAWKLACQFTTETSDAQDVVWSPDSG 192

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRK 409
            +A    S   + I      G   +LL   S  +        +WSPS + +     
Sbjct: 193 TLA-IYESNLYYKINFFDVQG---QLLGTYSAYEDALGIKGVSWSPSSQLIAVGSY 244



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 50/153 (32%), Gaps = 9/153 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+S + + V   +     I    L+   +        +     LAP    NG+   +  +
Sbjct: 99  RWSLDGRHVLTTSSFKLRITVWSLVSPHVTYIKFPKHDQPGFSLAP----NGRLMAVLER 154

Query: 278 KDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIV-FESDREGKEQLYVMQSNG 335
           +        +  ++     + T          +SPDS  +  +ES+     ++      G
Sbjct: 155 RQGRDYCSIISTEAWKLACQFTTETSDAQDVVWSPDSGTLAIYESNL--YYKINFFDVQG 212

Query: 336 SDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFS 367
                 S  ++A       WSP   LIA   + 
Sbjct: 213 QLLGTYSAYEDALGIKGVSWSPSSQLIAVGSYD 245


>gi|114705393|ref|ZP_01438301.1| hypothetical protein FP2506_10651 [Fulvimarina pelagi HTCC2506]
 gi|114540178|gb|EAU43298.1| hypothetical protein FP2506_10651 [Fulvimarina pelagi HTCC2506]
          Length = 325

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 44/243 (18%), Positives = 74/243 (30%), Gaps = 32/243 (13%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            +      DG   + L     + +    F+P   + A A YD   +            A 
Sbjct: 107 RTAYTWTNDG---KVLEKQFSRTVEGIAFAPKGLRCAVARYDGASLFF------PATDAE 157

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                ++   L   FS +GK  + ++Q++        D       R+T         S+S
Sbjct: 158 PLFLEWKGAHLGVAFSPDGKFLVTTMQENALHGWRIAD---GKHMRMTGYPSKVKDWSWS 214

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSD------QKRISQDKEASYFDPVWSPQGDLIAFT 364
                +       G     +   +G D         +              P  D++A  
Sbjct: 215 AKGKFLATT----GAPAAILWPFSGKDGPMGKAPLELGTRGNVMVTSVACHPSEDMLAIG 270

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              G   A+       S+E LL       L+   W   GR L F  + DG+ G     +D
Sbjct: 271 YSDGMILAVRFQD---SKEALLRRGGKGPLRTMAWDRRGRLLAFGSE-DGEAG----VVD 322

Query: 423 LNG 425
           + G
Sbjct: 323 IAG 325



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 46/133 (34%), Gaps = 23/133 (17%)

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTK------FSGEKFAIGVMKKDG 380
           +V    G     +      + +   W+  G ++   F++      F+ +     V + DG
Sbjct: 89  WVSVVAGGPSGAVGFASGRTAY--TWTNDGKVLEKQFSRTVEGIAFAPKGLRCAVARYDG 146

Query: 381 SQERLLVED---------SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           +       D                +SP G+ L+ + +++   G ++     +G++  + 
Sbjct: 147 ASLFFPATDAEPLFLEWKGAHLGVAFSPDGKFLVTTMQENALHGWRI----ADGKHMRMT 202

Query: 432 NTPAYASDPQWVG 444
             P+   D  W  
Sbjct: 203 GYPSKVKDWSWSA 215


>gi|24652561|ref|NP_610618.1| CG12325 [Drosophila melanogaster]
 gi|7303694|gb|AAF58744.1| CG12325 [Drosophila melanogaster]
 gi|54650840|gb|AAV36999.1| LD10780p [Drosophila melanogaster]
          Length = 949

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 74/248 (29%), Gaps = 26/248 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +                +    +S + Q +A    D +    V L +T+      
Sbjct: 374 QLLVWEWQSEQYIMKQQGHSSEMTCIAYSSDGQFIATGGEDSK----VKLWNTQSSFCFV 429

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-------FIN 304
                 S +   +FS N K+ L+S   D  +  + V+ +       T+          ++
Sbjct: 430 TFSEHTSGVTGIQFSRN-KKFLVSSSLDGTVRAFDVN-RYRNFRTFTSPNPAQFSCVAVD 487

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S        Q VF         +++          I    E       +SP        
Sbjct: 488 YSGELVVAGGQDVF--------DIFLWSVKTGKLLEIISGHEGPVVSIAFSPVATSSTLV 539

Query: 365 KFS-GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL----Y 419
             S  +   I    +  S+   +   S++   T+SPSG  +  +      T   +     
Sbjct: 540 SGSWDKTVKIWNCLESNSEHETIDAVSDVTNVTFSPSGEEIAVATLSGNITIFDIKSAGQ 599

Query: 420 SIDLNGRN 427
              + GRN
Sbjct: 600 VTTIEGRN 607



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 6/106 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T++ N +  ++PD + ++      G  ++ V     +  + +S +   +Y +   SP G 
Sbjct: 13  TIYRNGNLVFTPDGNSVI---SPVGN-RITVYDLKNNKSRTLSLESRYNYTNIALSPDGS 68

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           L+      GE   I +M       R   +   +Q   +SP+G    
Sbjct: 69  LLIAVNEKGEAQLISMMSC-TVIHRHKFQTG-VQCICFSPNGAFFA 112


>gi|29789343|ref|NP_598677.1| eukaryotic translation initiation factor 3 subunit B [Mus musculus]
 gi|81914516|sp|Q8JZQ9|EIF3B_MOUSE RecName: Full=Eukaryotic translation initiation factor 3 subunit B;
           Short=eIF3b; AltName: Full=Eukaryotic translation
           initiation factor 3 subunit 9; AltName: Full=eIF-3-eta;
           AltName: Full=eIF3 p116
 gi|21594439|gb|AAH31704.1| Eukaryotic translation initiation factor 3, subunit B [Mus
           musculus]
 gi|26329413|dbj|BAC28445.1| unnamed protein product [Mus musculus]
 gi|74198372|dbj|BAE39671.1| unnamed protein product [Mus musculus]
 gi|74221286|dbj|BAE42128.1| unnamed protein product [Mus musculus]
 gi|148687173|gb|EDL19120.1| eukaryotic translation initiation factor 3, subunit 9 (eta) [Mus
           musculus]
          Length = 803

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 278 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 329

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 330 -----RWSPKGTYLATFHQRGIALWGGDKFKQIQRFSHQGVQLID---------FSPCER 375

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 376 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 433

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 434 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 493

Query: 430 LI 431
            +
Sbjct: 494 RV 495



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 460 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 519

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 520 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 572

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      +    + I    +       WSPQG  +          A+  +     
Sbjct: 573 APRISVSFYHVKSNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 632

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 633 TVMNIAEHYMASDVEWDPTGRYVV 656



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 15/138 (10%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   ++FES     ++  +  ++  D   I +    +     WSP+G  +A     G   
Sbjct: 293 DQYSVIFES----GDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRG--- 345

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR----KKDGDTGSKLYSIDLNGRN 427
            I +   D  ++        +Q   +SP  R L+        +D      ++ I L G  
Sbjct: 346 -IALWGGDKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDI-LTGHK 403

Query: 428 ETLINTPAYASDP--QWV 443
           +   +  + A  P  +W 
Sbjct: 404 KRGFHCESSAHWPIFKWS 421


>gi|251791772|ref|YP_003006493.1| Curli production assembly/transport component CsgG [Dickeya zeae
           Ech1591]
 gi|247540393|gb|ACT09014.1| Curli production assembly/transport component CsgG [Dickeya zeae
           Ech1591]
          Length = 223

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 21/129 (16%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPV-------SIAFTKFV------- 56
           +N K   C +++        +  +   V T                I+  KF        
Sbjct: 1   MNKKAVFCSMVISATLLGGCATESSRTVETPKVVSYNTSYQGVRSPISVGKFENRTNYMN 60

Query: 57  -----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVL 111
                 +D LG +   ++   LQ++  FN++ + +  +  T      + Q     GA  +
Sbjct: 61  GIFSDGVDRLGNQAKTILVSHLQQTGRFNVLDRTNMDELKTEAGIKGQTQ--TLKGANYV 118

Query: 112 VTGRVIKEG 120
           VTG V + G
Sbjct: 119 VTGDVTEFG 127


>gi|255948094|ref|XP_002564814.1| Pc22g07980 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591831|emb|CAP98086.1| Pc22g07980 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 521

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 70/208 (33%), Gaps = 14/208 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +++     + +   +FSP+   +A A  D      V + DT   R         + I
Sbjct: 155 YKEKFVMHGHVRGVSAVQFSPDCSMIASAGAD----AAVRVWDTASGRLIHIFEGHLAGI 210

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               ++ +G     +   D+ +  ++V+     T+            +++P  + +V  S
Sbjct: 211 STLAWAPSGDWIA-TGSDDKTIRFWNVNTLKAHTKVFDGHHNYVYQIAFAPKGNILVSGS 269

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                E +++     +   R                 G LIA     G    I +     
Sbjct: 270 Y---DEAVFMWDVRRAQVMRSLPAHSDPVAGIDVGLDGTLIASCALDG---LIRIWDTHS 323

Query: 381 SQ-ERLLV--EDSNLQAPTWSPSGRSLI 405
            Q  R LV  ++       +SP+GR ++
Sbjct: 324 GQCLRTLVMEDNPPATCVKFSPNGRYVL 351


>gi|297196878|ref|ZP_06914275.1| WD repeat-containing protein [Streptomyces sviceus ATCC 29083]
 gi|297146521|gb|EFH28195.1| WD repeat-containing protein [Streptomyces sviceus ATCC 29083]
          Length = 562

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 84/260 (32%), Gaps = 35/260 (13%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
            H ++D   + + G     +       +   V++G    +       G  +R +     Q
Sbjct: 310 IHDVADRSVRHVLGPTEGIHEVCAITPDGSRVITGDYDAARWWDAATGRRLRSVDGWTTQ 369

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +  +P         A+   D      V    T   +   +  ++R+++ A   S +G+  
Sbjct: 370 LALDPGG-------AWVATDTRPRPAVIDSTTYAIKRLGKESDYRTLVTAMACSPDGRTV 422

Query: 273 LISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +  ++   + ++  D  S      L  +       +++PD S +   +     + + ++
Sbjct: 423 AV-GEQSGRIQLW--DPASGKLRAELPTSPRSVYRLAFAPDGSWLAAVT----LDGVRIL 475

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              G  ++R+       +        G  +A          +   + D  +   L+ +  
Sbjct: 476 GLPGG-RERLHIPGSQPFAVGD---GGRWLAV-----PGDTVRFHRTDTGE---LLGEFT 523

Query: 392 LQAPTW------SPSGRSLI 405
                W      SP GR L 
Sbjct: 524 PDHRGWDHRVRTSPDGRYLA 543


>gi|149925654|ref|ZP_01913918.1| WD-40 repeat [Limnobacter sp. MED105]
 gi|149825771|gb|EDM84979.1| WD-40 repeat [Limnobacter sp. MED105]
          Length = 369

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 59/153 (38%), Gaps = 12/153 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFESD 321
           FS++GK  +++ + DE + ++  D+++    +  +T    I       SPD  Q V   +
Sbjct: 187 FSADGKHIIVTNEADENVSVH--DIETGEKIKQIDTESYGIRPRGVKRSPDGEQFVVTLE 244

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              K  +     N  ++   +   E  Y    ++  G  I      G+  AI V      
Sbjct: 245 YGNKMLILDKNYNVINE---AATGEVPYGV-TYTRDGSEIVVALARGK--AIQVFDAKTL 298

Query: 382 QE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +  R +         +++P  + LI +  +  +
Sbjct: 299 ELKREMPVGERCWHFSFTPDDQQLIVACGRSNN 331


>gi|118592447|ref|ZP_01549839.1| hypothetical protein SIAM614_26506 [Stappia aggregata IAM 12614]
 gi|118435105|gb|EAV41754.1| hypothetical protein SIAM614_26506 [Stappia aggregata IAM 12614]
          Length = 380

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 55/175 (31%), Gaps = 23/175 (13%)

Query: 253 IGNFRSMILAPRFS-------------SNGKRALISVQK--DEAMDIYSVDLQSNATERL 297
           +     +   P FS             + G    +S  K  +    +  VD       R+
Sbjct: 12  LAALGGLATLPAFSGSTLAESLLSREAAEGVPLFVSAYKLENGDYGVGVVDDLGQVLARI 71

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSP 356
           T         + SPD S+ V  + R G   + V        + ++ +     Y    +S 
Sbjct: 72  T-LPGRGHGVAISPDKSRFVAFARRPGTFAVVVRPFQDVAPEVLTAEPGRHYYGHGCFSA 130

Query: 357 QGDLIAFTKFSGEKFA--IGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLI 405
            G+L+   +         +GV    G Q + +               +P GR+L+
Sbjct: 131 DGNLLYAVENDYATARGVLGVYDMSGRQVQRIGEIETHGIGPHDILLAPDGRTLV 185



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 28/113 (24%), Gaps = 5/113 (4%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G   + V+   G    RI+            SP              FA+ V       
Sbjct: 53  NGDYGVGVVDDLGQVLARITLPGRG--HGVAISPDKSRFVAFARRPGTFAVVVRPFQDVA 110

Query: 383 ERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +L  +          +S  G  L             L   D++GR    I 
Sbjct: 111 PEVLTAEPGRHYYGHGCFSADGNLLYAVENDYATARGVLGVYDMSGRQVQRIG 163


>gi|118088239|ref|XP_419579.2| PREDICTED: similar to PCAF associated factor 65 beta [Gallus
           gallus]
          Length = 589

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/217 (11%), Positives = 62/217 (28%), Gaps = 18/217 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D R              +     
Sbjct: 337 ILRGHCGPVYSTRFLSDSSGLLSCSEDM----SIRYWDLRSFTNTVLYQGHAYPVWDLDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+     +++    + P+S+ +   S   
Sbjct: 393 SP--CSLYFASASHDRTARLWSFDR--TYPLRIYAGHLLDVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              L     N+ + T+SP    +  +   +      +
Sbjct: 503 YKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 438 SNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQ----RLK 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 494 LWDLASGTLYKELRGHTDNITSLTFSPDSSLIA-SASMDNSVRVWDI 539


>gi|13991858|gb|AAK51529.1|AF363976_1 p36 LACK protein [Leishmania mexicana]
 gi|13991862|gb|AAK51531.1|AF363978_1 p36 LACK protein [Leishmania braziliensis]
 gi|2662479|gb|AAB88301.1| LACK [Leishmania braziliensis]
          Length = 312

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 59/167 (35%), Gaps = 12/167 (7%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + + D R  +  ++       +LA   S +  R ++S  +D  + +++V  +       
Sbjct: 88  SIRMWDLRNGQCQRKFLKHTKDVLAVASSPD-DRLIVSAGRDNVIRVWNVAGECMHEFLR 146

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            +      S  +SP     +  S       + V   NG   +R  +           SP 
Sbjct: 147 DSHEDWVSSICFSPSLEHPIVVSG-SWDNTIKVWNVNGGKCERTLKGHSNYVSTVTVSPD 205

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPS 400
           G L A     G+  A  +      +   L +  N+++P     +SP+
Sbjct: 206 GSLCA---SGGKDGAALLWDLSTGE--QLFK-INVESPINQIAFSPN 246



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 54/163 (33%), Gaps = 17/163 (10%)

Query: 163 YQSITGEKGDFNSRILFV----SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           ++ +     D+ S I F        VVSG   N++ V + +G             +    
Sbjct: 142 HEFLRDSHEDWVSSICFSPSLEHPIVVSGSWDNTIKVWNVNGGKCERTLKGHSNYVSTVT 201

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+    A             L D        +I N  S I    FS N     ++ ++
Sbjct: 202 VSPDGSLCA----SGGKDGAALLWDLSTGEQLFKI-NVESPINQIAFSPNRFWMCVATER 256

Query: 279 DEAMDIYSVDLQSNATE-RLTNT---LFINISASYSPDSSQIV 317
                +   DL+S A    LT         IS ++S D + + 
Sbjct: 257 S----LSVYDLESKAVIAELTPDGAKPSECISIAWSADGNTLY 295


>gi|332020818|gb|EGI61216.1| WD repeat-containing protein 82 [Acromyrmex echinatior]
          Length = 315

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 17/158 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           + ++ +SG +  SL + D    N   +      +   P  + + + + +A   + + +++
Sbjct: 118 IEDTFLSGSLDKSLRLWDLRSPNCHGVMN----VSGRPVAAYDPEGLIFAAGVNSESIKL 173

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           Y +   D       K            +FS +GK  LIS        I  +D       +
Sbjct: 174 YDLRSFDKGPFVTFKLSQEKECDWTGLKFSRDGKTILISTN---GSTIRLIDAFHGTPLQ 230

Query: 297 LT-----NTLFINISASYSPDSSQIVFESDREGKEQLY 329
            T     N   I I AS+SPD SQ VF    +G+  ++
Sbjct: 231 -TFAGHLNNKGIAIEASFSPD-SQFVFSGSTDGRVHVW 266


>gi|330841757|ref|XP_003292858.1| hypothetical protein DICPUDRAFT_157617 [Dictyostelium purpureum]
 gi|325076870|gb|EGC30623.1| hypothetical protein DICPUDRAFT_157617 [Dictyostelium purpureum]
          Length = 413

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 78/220 (35%), Gaps = 30/220 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+SP+ +K A ++YD      V   + +     +++ NF + I +  F+      + +V+
Sbjct: 200 RWSPDGKKFATSSYDKSVGYYVEDPNNQGQYILEKVWNFTATIESIIFTPESSHIIAAVR 259

Query: 278 KDEAMDIYSVDLQSN-ATERL-TNTLFIN------ISASYSPDSSQIVFESDREGKEQLY 329
           +   +   + D  S    +R   N+   +      +  S +P    ++  +DR    +L 
Sbjct: 260 ESNYIHYLNTDSDSGYNIDRYNMNSNGDDHVSFSALEFSITPCKKYLLVSTDR---NRLI 316

Query: 330 VMQSNGSDQKRISQDKEASYF---DPVWSPQGDLIAFTKFSGEKFAIGVMK------KDG 380
           + +     Q R        +F     +  P G  +  T      +   V         DG
Sbjct: 317 LFKLYSDKQLRNFYGATNEFFVTTRNIICPSGKYVFSTSQDNLIYVWEVANQKIIAKLDG 376

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                    S+++   +SP  +   F      D    L+S
Sbjct: 377 -------HRSSIRDLCFSPD-KM--FLASCGFDKKVNLWS 406


>gi|296531849|ref|ZP_06894654.1| cytochrome D1 heme-binding domain protein [Roseomonas cervicalis
           ATCC 49957]
 gi|296267819|gb|EFH13639.1| cytochrome D1 heme-binding domain protein [Roseomonas cervicalis
           ATCC 49957]
          Length = 303

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 42/120 (35%), Gaps = 9/120 (7%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-S 381
            G  +++++     + +R  ++  ++ ++  ++P G  +  T     +  I        +
Sbjct: 60  SGANEMFLLDPRSGEVRR--REPISNPYNLGFTPDGRRLVVTSLRRNQVDIYRWDGTSLA 117

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            E  L         T+SP  R   F   +         +IDL+ R E          DP 
Sbjct: 118 LEGRLQAGRKPSHVTFSPDSRF-AFVTLQGEAAA---IAIDLDTRTEAWRAEVG--RDPA 171



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 6/106 (5%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             A +++ +D +S    R    +    +  ++PD  ++V  S R  +  +Y         
Sbjct: 60  SGANEMFLLDPRSGEVRR-REPISNPYNLGFTPDGRRLVVTSLRRNQVDIYRWDGTSLAL 118

Query: 339 K-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           + R+   ++ S+    +SP     AF    GE  AI +   D   E
Sbjct: 119 EGRLQAGRKPSHV--TFSPDSRF-AFVTLQGEAAAIAI-DLDTRTE 160



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 13/113 (11%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQ------ILFEPR---FSPNQQKVAYATYDDEDILRVYL 241
             L ++   GAN  +L   R         +  P    F+P+ +++   +    + + +Y 
Sbjct: 52  RDLILVGDSGANEMFLLDPRSGEVRRREPISNPYNLGFTPDGRRLVVTSLR-RNQVDIYR 110

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
            D        R+   R       FS + + A +++Q        ++DL +   
Sbjct: 111 WDGTSLALEGRLQAGRKP-SHVTFSPDSRFAFVTLQ--GEAAAIAIDLDTRTE 160


>gi|255072803|ref|XP_002500076.1| hira like protein [Micromonas sp. RCC299]
 gi|226515338|gb|ACO61334.1| hira like protein [Micromonas sp. RCC299]
          Length = 950

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 75/237 (31%), Gaps = 41/237 (17%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL--------RVYLMDTRIDRAPKR 252
               ++       +F     P+  ++A A  D +  L        R    D  + R    
Sbjct: 5   YKPEFVKHDGGSPIFSVDCHPDGTRMATAGGDQKVKLWNLEALKKREVEADPNVPRVLAT 64

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE----------------R 296
           + +  + +   RFS NG+    S   D  + +Y         +                 
Sbjct: 65  LSDHFNTVNCVRFSKNGRFLA-SGSTDSNVFLYEKRPGPGRAQFGSTDEPNVENWVNCQA 123

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVW 354
           L   +   I  +++PD S +   S       + V        +R++  K  + F     W
Sbjct: 124 LRGHVSDVIDIAWAPDDSMLASCSL---DNLIIVWDPATG--QRVTTLKGHTSFVKGVAW 178

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-------TWSPSGRSL 404
            P G  +A T+   +   +  +  D S    + E              +WSP G+++
Sbjct: 179 DPIGKFLA-TQADDKSCIVWRVD-DWSVVSKITEPYQSSMGATFSLRLSWSPDGKAV 233


>gi|198459431|ref|XP_001361373.2| GA20529 [Drosophila pseudoobscura pseudoobscura]
 gi|198136687|gb|EAL25951.2| GA20529 [Drosophila pseudoobscura pseudoobscura]
          Length = 700

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 68/211 (32%), Gaps = 15/211 (7%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           DR G   R         ++   F+P    +   + D      + L               
Sbjct: 433 DRSGETTRNFL-GHTGPVYRCAFAPEMNLLLSCSEDS----TIRLWSLLTWSCVVTYRGH 487

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQ 315
              +   RF+ +G    +S   D+   ++S D  SN   R+      ++    + P+S+ 
Sbjct: 488 VYPVWDVRFAPHG-YYFVSCSYDKTARLWSTD--SNQALRVFVGHLSDVDCVQFHPNSNY 544

Query: 316 IVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +    SDR     + +  +      R+    + S     +S  G  +A +  +     I 
Sbjct: 545 VATGSSDRT----VRLWDNLTGQSVRLMTGHKGSVSALAFSTCGRYLA-SGSTDNNIIIW 599

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +        LL   S +   T+S  G  L 
Sbjct: 600 DLSNGSLVTTLLRHTSTVTTITFSRDGTLLA 630



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 10/127 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L   D + A   ++    D    +  F PN   VA  + D      V L D    ++ +
Sbjct: 513 RLWSTDSNQALRVFVGHLSDVDCVQ--FHPNSNYVATGSSDR----TVRLWDNLTGQSVR 566

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYS 310
            +   +  + A  FS+ G+    S   D  + I+  DL + +    L        + ++S
Sbjct: 567 LMTGHKGSVSALAFSTCGRYLA-SGSTDNNIIIW--DLSNGSLVTTLLRHTSTVTTITFS 623

Query: 311 PDSSQIV 317
            D + + 
Sbjct: 624 RDGTLLA 630


>gi|194378566|dbj|BAG63448.1| unnamed protein product [Homo sapiens]
          Length = 661

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 136 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 187

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 188 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 233

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 234 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 291

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 292 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 351

Query: 430 LI 431
            +
Sbjct: 352 RV 353



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 318 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 377

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 378 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 430

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      N    + I    +       WSPQG  +          A+  +     
Sbjct: 431 APRISVSFYHVKNNGKIELIKMFDKQQANIIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 490

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 491 TVMNIAEHYMASDVEWDPTGRYVV 514


>gi|195172728|ref|XP_002027148.1| GL20028 [Drosophila persimilis]
 gi|194112961|gb|EDW35004.1| GL20028 [Drosophila persimilis]
          Length = 684

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 68/211 (32%), Gaps = 15/211 (7%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           DR G   R         ++   F+P    +   + D      + L               
Sbjct: 417 DRSGETTRNFL-GHTGPVYRCAFAPEMNLLLSCSEDS----TIRLWSLLTWSCVVTYRGH 471

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQ 315
              +   RF+ +G    +S   D+   ++S D  SN   R+      ++    + P+S+ 
Sbjct: 472 VYPVWDVRFAPHG-YYFVSCSYDKTARLWSTD--SNQALRVFVGHLSDVDCVQFHPNSNY 528

Query: 316 IVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +    SDR     + +  +      R+    + S     +S  G  +A +  +     I 
Sbjct: 529 VATGSSDRT----VRLWDNLTGQSVRLMTGHKGSVSALAFSTCGRYLA-SGSTDNNIIIW 583

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +        LL   S +   T+S  G  L 
Sbjct: 584 DLSNGSLVTTLLRHTSTVTTITFSRDGTLLA 614



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 10/127 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L   D + A   ++    D    +  F PN   VA  + D      V L D    ++ +
Sbjct: 497 RLWSTDSNQALRVFVGHLSDVDCVQ--FHPNSNYVATGSSDR----TVRLWDNLTGQSVR 550

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYS 310
            +   +  + A  FS+ G+    S   D  + I+  DL + +    L        + ++S
Sbjct: 551 LMTGHKGSVSALAFSTCGRYLA-SGSTDNNIIIW--DLSNGSLVTTLLRHTSTVTTITFS 607

Query: 311 PDSSQIV 317
            D + + 
Sbjct: 608 RDGTLLA 614


>gi|194884159|ref|XP_001976163.1| GG20152 [Drosophila erecta]
 gi|190659350|gb|EDV56563.1| GG20152 [Drosophila erecta]
          Length = 949

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 39/247 (15%), Positives = 76/247 (30%), Gaps = 25/247 (10%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +                +    +S + Q +A    D +    V L +T+      
Sbjct: 374 QLLVWEWQSEQYIMKQQGHSSEMTCIAYSSDGQFIATGGEDSK----VKLWNTQSSFCFV 429

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-------FIN 304
                 S +   +FS N K+ L+S   D  +  + ++ +       T+          ++
Sbjct: 430 TFSEHTSGVTGIQFSRN-KKFLVSSSLDGTVRAFDIN-RYRNFRTFTSPNPAQFSCVAVD 487

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S        Q VF         +++          I    E       +SP        
Sbjct: 488 YSGELVVAGGQDVF--------DIFLWSVKTGKLLEIISGHEGPVVSIAFSPVATSSTLV 539

Query: 365 KFS-GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             S  +   I    +  S+   +   S++   T+SPSG  +  +      T   ++ I  
Sbjct: 540 SGSWDKTVKIWNCLESNSEHETIDAVSDVTNVTFSPSGEEIAVATLSGNIT---IFDIKS 596

Query: 424 NGRNETL 430
            G+  T+
Sbjct: 597 AGQVATI 603



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 6/106 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           T++ N +  ++PD + ++      G  ++ V     +  + +S +   +Y +   SP G 
Sbjct: 13  TIYRNGNLVFTPDGNSVI---SPVGN-RITVYDLKNNKSRTLSLESRYNYTNLALSPDGS 68

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
           L+      GE   I +M       R   +   +Q   +SP+G    
Sbjct: 69  LLIAVNEKGEAQLISMMSC-TVIHRHKFQTG-VQCICFSPNGAFFA 112


>gi|149730871|ref|XP_001494049.1| PREDICTED: similar to Dipeptidyl peptidase 4 (Dipeptidyl peptidase
           IV) (DPP IV) (T-cell activation antigen CD26) (TP103)
           (Adenosine deaminase complexing protein 2) (ADABP)
           [Equus caballus]
          Length = 766

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/160 (15%), Positives = 53/160 (33%), Gaps = 35/160 (21%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ---KDEAMDIYSVDLQSNAT 294
            ++L ++  D     I ++         S + +  L+      +       S D+     
Sbjct: 87  SIFLENSTFDEFGHAISDY-------SVSPDRQFILLEYNYVKQWRHSYTASYDIYDLNK 139

Query: 295 ERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK------ 345
            +L     I       ++SP+  ++ +         +YV     S  +RI+ +       
Sbjct: 140 RQLITEERIPNKTQWITWSPEGHKLAYV----WNSDIYVKNEPNSSSQRITWNGKENVIY 195

Query: 346 ------------EASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                        +SY    WSP G  +A+ +F+  +  +
Sbjct: 196 NGITDWVYEEEVFSSYSALWWSPNGTFLAYAQFNDTEVPL 235



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 44/154 (28%), Gaps = 29/154 (18%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR-D 211
           +  H ISD    S++ ++        +V +   S      +     D    + +T  R  
Sbjct: 97  EFGHAISD---YSVSPDRQFILLEYNYVKQWRHSYTASYDI----YDLNKRQLITEERIP 149

Query: 212 QILFEPRFSPNQQKVAYATY-----------------DDEDILRVYLMDTRIDRAPKRIG 254
                  +SP   K+AY                     +     +Y   T      +   
Sbjct: 150 NKTQWITWSPEGHKLAYVWNSDIYVKNEPNSSSQRITWNGKENVIYNGITDWVYEEEVFS 209

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           ++ ++     +S NG     +   D  + +    
Sbjct: 210 SYSALW----WSPNGTFLAYAQFNDTEVPLIEYS 239


>gi|145479353|ref|XP_001425699.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392771|emb|CAK58301.1| unnamed protein product [Paramecium tetraurelia]
          Length = 359

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 50/169 (29%), Gaps = 14/169 (8%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N           L +  FS + + +A  +      L ++ + TR  +  K++ N  S  L
Sbjct: 84  NEGMQLNGHSGRLKQIFFSLDGKSLASCSV--GKALYLWDVKTRKIKFNKKVTNVDSFCL 141

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFES 320
               S NG     S      +     +L++      L           +SP+ + +   S
Sbjct: 142 ----SPNGTTLASSCNNLAYLW----NLKTGKKICNLIGHKDTISQVWFSPNGTLLASGS 193

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                  + +     S  K              +SP    +AF      
Sbjct: 194 ---WNGSVRLWDVKKSQSKANLDGDSECDKSICFSPDDTSLAFHSSDNS 239


>gi|119717994|ref|YP_924959.1| YVTN beta-propeller repeat-containing protein [Nocardioides sp.
           JS614]
 gi|119538655|gb|ABL83272.1| 40-residue YVTN family beta-propeller repeat protein [Nocardioides
           sp. JS614]
          Length = 406

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 73/209 (34%), Gaps = 17/209 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P+   +   +    D L V L    +           SM      + +G  A  S  +D
Sbjct: 106 APDGNTIWTVSGH--DSLAVMLDAATLGLHGTVGT--GSMPAHVVLTPDGSTAYTSNGED 161

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                 +V     AT R T T+ +         SPD S+IV  ++  G     +  ++  
Sbjct: 162 G-----TVTAIDTATMRPTATIPVGAGPHGLRPSPDGSRIV-VANIGGSTLSVIDTASNE 215

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +  +I  +  A+     +SP G  + +   + E   + V    G         S      
Sbjct: 216 EVTQI--EVGAAPAQVAFSPDGRFV-YASLNAEDAVVKVDLAKGRAIAKTTVGSGPIQTY 272

Query: 397 WSPSGRSLIFSRKKDGD-TGSKLYSIDLN 424
            SP G  L+ + +   D  G+ +  +D +
Sbjct: 273 VSPDGELLLVANQGTEDAPGTTVSVVDTD 301



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 67/187 (35%), Gaps = 19/187 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+  ++  A       L V    +  +     +G   + +    FS +G+    S+  +
Sbjct: 190 SPDGSRIVVANIG-GSTLSVIDTASNEEVTQIEVGAAPAQV---AFSPDGRFVYASLNAE 245

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----DREGKEQLYVMQSNG 335
           +A  +  VDL        T      I    SPD   ++  +    D  G   + V+ ++ 
Sbjct: 246 DA--VVKVDLAKGRAIAKTTVGSGPIQTYVSPDGELLLVANQGTEDAPGTT-VSVVDTDS 302

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            +     +  E ++   V  P G     T   G    + V+     + R++      +AP
Sbjct: 303 FEVVETIETGEGAH-GIVIDPTGRQAYVTNIYGN--DVAVIDLQ--ELRVVARVPVGEAP 357

Query: 396 ---TWSP 399
              ++SP
Sbjct: 358 NGISFSP 364



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 66/209 (31%), Gaps = 17/209 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A+I       D     P  +       +   +  D L      T ID A   +    S I
Sbjct: 44  ASIAVALADDDGAERPPSAAAGVTGTIWVANEAGDSL------TAIDAATHEVVTTVSGI 97

Query: 261 LAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
             P   + + +G     +V   +++ +  +D  +        T  +      +PD S   
Sbjct: 98  AGPHNVQVAPDGNTI-WTVSGHDSLAVM-LDAATLGLHGTVGTGSMPAHVVLTPDGST-A 154

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           + S+  G++         + +   +    A       SP G  I      G    + V+ 
Sbjct: 155 YTSN--GEDGTVTAIDTATMRPTATIPVGAGPHGLRPSPDGSRIVVANIGGST--LSVID 210

Query: 378 KDGSQE-RLLVEDSNLQAPTWSPSGRSLI 405
              ++E   +   +      +SP GR + 
Sbjct: 211 TASNEEVTQIEVGAAPAQVAFSPDGRFVY 239


>gi|322783665|gb|EFZ11003.1| hypothetical protein SINV_04225 [Solenopsis invicta]
          Length = 315

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 17/158 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           + ++ +SG +  SL + D    N   +      +   P  + + + + +A   + + +++
Sbjct: 118 IEDTFLSGSLDKSLRLWDLRSPNCHGVMN----VSGRPVAAYDPEGLIFAAGVNSESIKL 173

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           Y +   D       K            +FS +GK  LIS        I  +D       +
Sbjct: 174 YDLRSFDKGPFVTFKLSQEKECDWTGLKFSRDGKTILISTN---GSTIRLIDAFHGTPLQ 230

Query: 297 LT-----NTLFINISASYSPDSSQIVFESDREGKEQLY 329
            T     N   I I AS+SPD SQ VF    +G+  ++
Sbjct: 231 -TFAGYLNNKGIAIEASFSPD-SQFVFSGSTDGRVHVW 266


>gi|302676275|ref|XP_003027821.1| hypothetical protein SCHCODRAFT_83379 [Schizophyllum commune H4-8]
 gi|300101508|gb|EFI92918.1| hypothetical protein SCHCODRAFT_83379 [Schizophyllum commune H4-8]
          Length = 870

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 73/216 (33%), Gaps = 28/216 (12%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N+          +   ++SP+ +     + D     R++ ++      PK     R  +
Sbjct: 135 FNLHRTYTGHHDDVLSIQWSPDSKCFITTSRDM--TARLFTLNPLEGFRPKTFAGHRDAV 192

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIV 317
           L   FS +      +V +D A+  +         E+ +     +      S S D + + 
Sbjct: 193 LGAFFSKDATTI-YTVSRDGAVFTWK--------EKGSEDDDSDAEPPIASTSADPNYVA 243

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
             + R G  + +     G+    +S       F PV S     +    FS   F +  M 
Sbjct: 244 --NTRWGVHERHYFNQPGTKVVCVS-------FHPVTS-----LLIVGFSTGVFGLWEMP 289

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
              + + L V    + +   + +G  L F  KK G 
Sbjct: 290 AFTNIQTLSVSQEKISSVAINATGEWLAFGAKKLGQ 325



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 59/153 (38%), Gaps = 12/153 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRA---PKRIGNFRSMILAPRFSSNGKRALI 274
           +FSP+ + +A        +        R        +        +L+ ++S +  +  I
Sbjct: 103 KFSPDGKFIAVTHGAHIKVWHTPNYLAREFAPFNLHRTYTGHHDDVLSIQWSPD-SKCFI 161

Query: 275 SVQKDEAMDIYSVD-LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           +  +D    +++++ L+    +         + A +S D++ I +   R+G   ++  + 
Sbjct: 162 TTSRDMTARLFTLNPLEGFRPKTFAGHRDAVLGAFFSKDATTI-YTVSRDGA--VFTWKE 218

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            GS+      D +A       S   + +A T++
Sbjct: 219 KGSE----DDDSDAEPPIASTSADPNYVANTRW 247



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 50/159 (31%), Gaps = 11/159 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-- 275
             SP+   +     D   +L  +     +        NF   +   +FS +GK   ++  
Sbjct: 62  ALSPDGNVLLSIDDDGRALLVNFKRGVVLHHF-----NFGKPVNDAKFSPDGKFIAVTHG 116

Query: 276 --VQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQ 332
             ++     +  + +       R       ++ S  +SPDS   +  S R+   +L+ + 
Sbjct: 117 AHIKVWHTPNYLAREFAPFNLHRTYTGHHDDVLSIQWSPDSKCFITTS-RDMTARLFTLN 175

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                + +       +     +S     I      G  F
Sbjct: 176 PLEGFRPKTFAGHRDAVLGAFFSKDATTIYTVSRDGAVF 214


>gi|300715546|ref|YP_003740349.1| Curli production assembly/transport component CsgG [Erwinia
           billingiae Eb661]
 gi|299061382|emb|CAX58492.1| Curli production assembly/transport component CsgG [Erwinia
           billingiae Eb661]
          Length = 225

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 19/131 (14%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANY-----SPVSIAFTKFV----- 56
           +   +N+     L   ++ G    S  A       +A       +   IA  KF      
Sbjct: 1   MKPYINVLALTLLSSAMLSGCATESSRAIEAPQVTAATQPAWQGAKSPIAVGKFDNRSAY 60

Query: 57  -------SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ 109
                   +D LG +   ++   LQ++  FN++ + +  +           Q     GA 
Sbjct: 61  MNGIFSDGVDRLGNQSKTILITHLQQTGRFNVLDRANLDELKAEAGYKRSAQ--TIKGAD 118

Query: 110 VLVTGRVIKEG 120
            +VTG + + G
Sbjct: 119 YVVTGDITEFG 129


>gi|271969349|ref|YP_003343545.1| hypothetical protein Sros_8147 [Streptosporangium roseum DSM 43021]
 gi|270512524|gb|ACZ90802.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 634

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 77/234 (32%), Gaps = 18/234 (7%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNG 269
             +      SP+  K+AY +    D L V++     D   + +    +  +    ++ + 
Sbjct: 19  SPVRAGASISPDGTKIAYLS-PWRDRLNVWVESLDSDEEARCVTADDNRSVHIFHWTDDP 77

Query: 270 KRALISVQKDEA--MDIYSVDLQSNATER--LTNTLF---INISASYSPDSSQIVFESDR 322
           +  L     D      +Y VDL     +   LT       +      S      +  + R
Sbjct: 78  RWLLYEQDGDGDEMWHVYRVDLADPDAKAVDLTPFPGALAVGFEMVVSRPGKAFLHLNAR 137

Query: 323 EGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
              E  LY +     +   ++Q+   +      +P GDL A T  +G    +        
Sbjct: 138 NPVEFDLYELDIATGELTILAQNPGQAAGWLC-TPAGDLYAQTLTAGGDIELAQWDTSEG 196

Query: 382 QERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           + R +        P        +P G  +     ++ D  ++L  +DL    ET
Sbjct: 197 KLRPVATFDGADYPLSIQPFELTPDGTGVWIGSNRNSDR-TRLVRLDLATGEET 249



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 6/89 (6%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSN--LQAPTWSPSGRSLIFSRK 409
             SP G  IA+     ++  + V   D  +E R +  D N  +    W+   R L++ + 
Sbjct: 26  SISPDGTKIAYLSPWRDRLNVWVESLDSDEEARCVTADDNRSVHIFHWTDDPRWLLYEQD 85

Query: 410 KDGDTGSKLYSIDL---NGRNETLINTPA 435
            DGD    +Y +DL   + +   L   P 
Sbjct: 86  GDGDEMWHVYRVDLADPDAKAVDLTPFPG 114


>gi|218194379|gb|EEC76806.1| hypothetical protein OsI_14927 [Oryza sativa Indica Group]
          Length = 469

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 36/105 (34%), Gaps = 9/105 (8%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + +    FSP+ + +A  + D      V   D             ++ +L   +S +
Sbjct: 113 GHTEAVLAVSFSPDGRCLASGSGDT----TVRFWDLNTQTPLFTCKGHKNWVLCIAWSPD 168

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP 311
           G   + S  K   + ++  D ++       LT       + S+ P
Sbjct: 169 GNHLV-SGSKSGELILW--DPKTGKQLGTPLTGHRKWITAVSWEP 210



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 73/262 (27%), Gaps = 46/262 (17%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D +     +        +    +SP+   +   +   +    +      
Sbjct: 132 SGSGDTTVRFWDLNTQTPLFTCKGHKNWVLCIAWSPDGNHLVSGS---KSGELILWDPKT 188

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRA----LISVQKDEAMDIYSVDLQSNA-TERLTNT 300
             +    +   R  I A  +     +A     +S  KD    I+  D+ +      LT  
Sbjct: 189 GKQLGTPLTGHRKWITAVSWEPVHLQAPCRRFVSASKDGDARIW--DITTRKCVIALTGH 246

Query: 301 LFINISASYSPDSSQIVFESDRE----------GK------EQLYVMQSNGSDQKRISQD 344
                   +  D   +++    +          GK         + + S     + I + 
Sbjct: 247 TNSVTCVKWGGDG--LIYTGSEDCLIKVWETSQGKLVKTLQGHGHWVNSLALSTEYILRT 304

Query: 345 KEASYFDPVWS-PQGDLIA----FTKFSGE----------KFAIGVMKKDGSQE---RLL 386
               +    +S       A    + K  G            F + + +   S++   R+ 
Sbjct: 305 GAYDHTGKTYSTADEMKEAALARYKKMRGNAPERLVSGSDDFTMFLWEPTISKQPKARMT 364

Query: 387 VEDSNLQAPTWSPSGRSLIFSR 408
                +    +SP G+ L  + 
Sbjct: 365 GHQKLVNHVYFSPDGQWLASAS 386



 Score = 40.0 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 50/116 (43%), Gaps = 8/116 (6%)

Query: 182 ESVVSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    ++ + +       +       +++    FSP+ Q +A A++D      V 
Sbjct: 337 ERLVSGSDDFTMFLWEPTISKQPKARMTGHQKLVNHVYFSPDGQWLASASFDK----SVK 392

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           L +    +         + +    +S++  R L+S  KD  + ++  D++++  ++
Sbjct: 393 LWNGITGKFVAAFRGHVADVYQISWSAD-SRLLLSGSKDSTLKVW--DIRTHKLKQ 445


>gi|194218759|ref|XP_001915112.1| PREDICTED: similar to Eukaryotic translation initiation factor 3
           subunit B (Eukaryotic translation initiation factor 3
           subunit 9) (eIF-3-eta) (eIF3 p116) (eIF3 p110) (eIF3b)
           (Prt1 homolog) (hPrt1) [Equus caballus]
          Length = 854

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 329 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 380

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 381 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 426

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 427 YLVTFSPLMDTQDDPQAIIIWDILTGQKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 484

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 485 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 544

Query: 430 LI 431
            +
Sbjct: 545 RV 546



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 30/204 (14%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 511 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 570

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 571 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 623

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      +    + I    +       WSPQG  +          A+  +     
Sbjct: 624 APRISVSFYHVKSNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 683

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 684 TVMNIAEHYMASDVEWDPTGRYVV 707


>gi|225456106|ref|XP_002281466.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297734297|emb|CBI15544.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 43/290 (14%), Positives = 81/290 (27%), Gaps = 65/290 (22%)

Query: 32  IHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS-----KDLQRSDVFNLISQDS 86
           +H  ++V+    +    ++A             VS  V       D      F ++S   
Sbjct: 44  LHKPLEVSIYGEHAYQATVARFSPNGEWIASADVSGTVRIWGTHNDHVLKKEFRVLS--- 100

Query: 87  FKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS 146
                           W++ G +++V+G    +GK +  V   +WD              
Sbjct: 101 ---------GRIDDLQWSADGMRIVVSG----DGKGKSFVRAFMWDSGSN---------- 137

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD------- 199
                                   G+F+     V            +     D       
Sbjct: 138 -----------------------VGEFDGHSKRVLSCAFKPTRPFRIVTCGEDFLVNFYE 174

Query: 200 GANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           G   ++    R    F    R+SP+  K    + D + ++       +I       G  +
Sbjct: 175 GPPFKFKQSHRHHSNFVNCIRYSPDGSKFISVSSDKKGVIYDGKTGEKIGELSSEDG-HK 233

Query: 258 SMILAPRFSSNGKRAL-ISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
             I A  +S + K+ L +S  K   +   S D      + LT      + 
Sbjct: 234 GSIYAVSWSPDSKQVLTVSADKSAKVWEISEDGNGKVKKTLTCPGSGGVE 283



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 11/129 (8%)

Query: 298 TNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           T  L   ++AS  SPD S+      ++GK  +Y +  +   ++ + +    +     +SP
Sbjct: 443 TINLGFPVAASVISPDGSE-AIIGGQDGKLHIYSVTGDTLKEEAVLEKHRGAITVIRYSP 501

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
              +  F      + A+ V  +   + R+   L   + +    WSP    +        D
Sbjct: 502 D--VSMFASGDANREAV-VWDRASREVRVKNMLYHTARINCLAWSPDNSMVATGSL---D 555

Query: 414 TGSKLYSID 422
           T   +Y ID
Sbjct: 556 TCVIIYEID 564



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVF 318
           + A   S +G  A+I  Q D  + IYSV   +      L           YSPD S    
Sbjct: 450 VAASVISPDGSEAIIGGQ-DGKLHIYSVTGDTLKEEAVLEKHRGAITVIRYSPDVSMFA- 507

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMK 377
               +   +  V      + +  +     +  +   WSP   ++A            + K
Sbjct: 508 --SGDANREAVVWDRASREVRVKNMLYHTARINCLAWSPDNSMVATGSLDTCVIIYEIDK 565

Query: 378 KDGSQERL 385
              S+  +
Sbjct: 566 PASSRVTI 573


>gi|270006128|gb|EFA02576.1| hypothetical protein TcasGA2_TC008294 [Tribolium castaneum]
          Length = 555

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 5/111 (4%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFINIS-ASYSPDSSQIVFESD 321
           FS +G +   +  KD  + I+ V  ++   + +++        S  S+SPDS  ++    
Sbjct: 263 FSPDGTKLA-TGSKDTNVIIWDVHPETCTLSLKKILEGHNYGASYISWSPDSVHLIACGP 321

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
            E   ++++         ++SQ  E +     W   G         G  + 
Sbjct: 322 EE-SPEVWLWNIETEKFLKVSQSPEDALACCAWHKDGTKFVVGGIRGHFYQ 371


>gi|167036623|ref|YP_001664201.1| hypothetical protein Teth39_0192 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115050|ref|YP_004185209.1| hypothetical protein Thebr_0198 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|166855457|gb|ABY93865.1| hypothetical protein Teth39_0192 [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|319928141|gb|ADV78826.1| hypothetical protein Thebr_0198 [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 484

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 48/275 (17%), Positives = 96/275 (34%), Gaps = 34/275 (12%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           R++F   +           V+  DG +N       +++ +   +  P Q K     + D 
Sbjct: 35  RLVFSLPNSSEDFDNTLYTVLLYDGNSNKIASEFLKNKRIGYYKLLPRQDKNVVGIHYDA 94

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----AMDIYSVDLQ 290
                Y+++     AP+R+       + P +S +G+     +  D     +  I+S D+ 
Sbjct: 95  ASFEYYVINID-GSAPERLTLPVRDGIYPVWSDDGEYI-YGISPDSLNAKSGYIFSYDVN 152

Query: 291 SNATERLTNTLFINISASYSP--DSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEA 347
               E+      IN      P  D+  ++F  D     ++  +       K + S +   
Sbjct: 153 KGTFEKYPLESEINSCGKIKPYFDNKGVLFICD----NKINYLNFENKVVKPVYSFNGSV 208

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--------VEDSNLQAPTWSP 399
           +Y     S       F     +     +   DG+  +++         +  +L +  + P
Sbjct: 209 TYG----SLDKSRTIFVLNDEKN---CLDVLDGNNFKIIKTYKNILKYKFYSLDSMAF-P 260

Query: 400 SGRSLIFSRK----KDGDTGSKLYSIDLNGRNETL 430
            G  +IF       K    G+ + S+DLNG    L
Sbjct: 261 DGEHVIFKIYKYDDKGNFIGAPIVSVDLNGNVREL 295


>gi|299469661|emb|CBN76515.1| WD repeat protein [Ectocarpus siliculosus]
          Length = 425

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 44/319 (13%), Positives = 103/319 (32%), Gaps = 43/319 (13%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
              +TG   +  K       ++W+     +++               H   + +Y     
Sbjct: 106 DKFITGSYDRTCKTEAHAHEQVWNTTTGDELLTLD-----------GHR--NVVYAIAFN 152

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
               +  +I+       +G    +  + + +  N+ +        +    F P+  K+A 
Sbjct: 153 --NPWGDKII-------TGSFDKTCKLWNAETGNLYHTYRGHSTEIVCLSFDPHGTKIAT 203

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            + D+       + D         +    + I++  F +NG+R +++   D  + ++  D
Sbjct: 204 GSMDN----TARVFDVESGECLHTLLGHTAEIVSLNFDTNGQR-VMTGSFDHTVKLW--D 256

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESD--REGK--EQLYVMQSNGSDQKRISQD 344
           +++    R T+TL        S  S+Q  + SD    G       V            + 
Sbjct: 257 VRTG---RCTHTLA-GHHGEIS--STQFSYSSDLCISGSIDRTCKVWDVASGQCVHTLRG 310

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                 D  ++  G  +      G       M     Q  L+  +  +    ++P G  +
Sbjct: 311 HNDEILDVSFNATGSRLVTASADGTSRVFNTMNGAC-QAILIGHEGEISKTCFNPQGTRI 369

Query: 405 IFSRKKDGDTGSKLYSIDL 423
           + +     D  ++L+  D 
Sbjct: 370 LTASS---DKVARLWDADT 385


>gi|224587365|gb|ACN58650.1| Fizzy-related protein homolog [Salmo salar]
          Length = 421

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/253 (12%), Positives = 80/253 (31%), Gaps = 19/253 (7%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            + D      +     +N R   V+     G  K  + + D  G             +  
Sbjct: 150 RLCDLSVDGDSVTSVCWNERGSLVAV----GTHKGYVQIWDAAGGRKLTSLEGHSARVGA 205

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +  N +++   +    D + +         A +R+   R  +   ++S + +      
Sbjct: 206 LAW--NGEQL---SSGSRDRVILQRDVRTPPSAERRLQGHRQEVCGLKWSPDHQHLA--- 257

Query: 277 QKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                 D   +   S++    ++ ++ L    + ++SP    ++  S     ++     +
Sbjct: 258 --SGGNDNKLLVWNSSSLLPMQQYSDHLAAVKAIAWSPHQHGLL-VSGGGTADRCLRFWN 314

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVEDSNL 392
             + Q   S D  +   +  WS   + +  T  +S  +  +          +L      +
Sbjct: 315 TLTGQPLQSTDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLNQVAKLTGHSYRV 374

Query: 393 QAPTWSPSGRSLI 405
                SP G +++
Sbjct: 375 LYLAVSPDGEAIV 387


>gi|88706857|ref|ZP_01104557.1| Prolyl oligopeptidase family [Congregibacter litoralis KT71]
 gi|88698907|gb|EAQ96026.1| Prolyl oligopeptidase family [Congregibacter litoralis KT71]
          Length = 664

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 68/204 (33%), Gaps = 22/204 (10%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVYLMDTRIDRAPKRIGNFRSMI--- 260
            +  SR   +  PR SP+ + +A+ ++   +       + +        + + R      
Sbjct: 182 TVLFSRTDFVSAPRLSPDGKHIAFVSWMHPNMPWDSTTLHSASFDEAGMLTDLRIHNPKS 241

Query: 261 ----LAPRFSSNGKRALISVQKDEAMDIYSVD------LQSNATERLTNTLFINISASYS 310
               + P++  +     +S  +D     Y VD      + +             I   Y 
Sbjct: 242 DESVIDPQWRDDNTLIALS-DRDNWWKPYRVDGSDFTAIDTGLEHVEIGGPAWTIGGRYY 300

Query: 311 ---PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
              PD S +VF +     E L  +  +G  + R       S+   V+   G L     F+
Sbjct: 301 WFLPDGS-MVFVAREGSVETLMHLDKDG--KTRELPMGAVSFGSVVY-DDGQLYFTAGFA 356

Query: 368 GEKFAIGVMKKDGSQERLLVEDSN 391
            +  A+      GS   ++   S+
Sbjct: 357 DKPAALLSASLKGSVNNVIRRSSD 380


>gi|254190646|ref|ZP_04897153.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|254259372|ref|ZP_04950426.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
 gi|157938321|gb|EDO93991.1| conserved hypothetical protein [Burkholderia pseudomallei Pasteur
           52237]
 gi|254218061|gb|EET07445.1| conserved hypothetical protein [Burkholderia pseudomallei 1710a]
          Length = 391

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D + V +R +D    +        +   S+ 
Sbjct: 13  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYV-YR-FDTDSGRVSPVSSAKAENPSYL 70

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 71  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 128

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 129 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 188

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 189 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 222

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    +  +       
Sbjct: 223 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLAHVETVPMTAPGF 282

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 283 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 327


>gi|316965298|gb|EFV50051.1| WD domain, G-beta repeat-containing domain protein [Trichinella
           spiralis]
          Length = 780

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 61/170 (35%), Gaps = 12/170 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FSP+ Q +AYA  D  + +      ++     + +G    +I    +S +    L+S  
Sbjct: 434 KFSPDGQYLAYAHSDISECVISIYQPSKEKLLGQLVG-HTGLIYELFWSDD-SSLLLSAS 491

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D    ++ +   +    ++         A + P  +Q +F    + + +++   +  S 
Sbjct: 492 ADCTARLWEI--GNRNCCQIIAHPSYVYCARFYPKQNQYIFTGCFDKRIRIWYCHAARSS 549

Query: 338 -----QKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                 K I+  +    F    V+S  G    ++        +     +G
Sbjct: 550 ASVIHAKLITTLEWHPSFVNSIVFSHDGQT-MYSGDGNGLLLVWRCCANG 598


>gi|213403400|ref|XP_002172472.1| ski complex subunit Rec14 [Schizosaccharomyces japonicus yFS275]
 gi|212000519|gb|EEB06179.1| ski complex subunit Rec14 [Schizosaccharomyces japonicus yFS275]
          Length = 302

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 22/184 (11%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   +A+ T D      + + D + +     +     + L   +SS+G+         
Sbjct: 112 SPDGNILAFTTVDG----HLCIWDKQENTKIADLDTKGKLGLCIAYSSDGRFIA---SGH 164

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +   ++ V  ++    RL ++L  +       ++SP S  +    D    + + +     
Sbjct: 165 QTGQLFLVSSETG---RLFHSLLGHTQPVRSVAFSPGSKLLAAAGD---SKMITIYDVMS 218

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQ 393
            DQ       ++  F   ++P GDL+     SG    I +   D  Q        D  + 
Sbjct: 219 GDQVAQLSGHKSWVFAIAFNPVGDLLLSADSSG---VIKIWDIDTLQCIGTQSETDGAIW 275

Query: 394 APTW 397
           +  W
Sbjct: 276 SVAW 279



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 53/159 (33%), Gaps = 20/159 (12%)

Query: 274 ISVQKDEAMDIYSVDLQSNATERLT---NTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           ++V      D+   +  +  T  L           +A  SPD + + F    +G   ++ 
Sbjct: 73  LAVTCGFGQDVCLWNTSTGETAPLGSEWTHPGECWAACTSPDGNILAFT-TVDGHLCIWD 131

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVE 388
            Q N       ++ K        +S  G  IA    +G    + ++  +  +    LL  
Sbjct: 132 KQENTKIADLDTKGKLG--LCIAYSSDGRFIASGHQTG---QLFLVSSETGRLFHSLLGH 186

Query: 389 DSNLQAPTWSP---------SGRSLIFSRKKDGDTGSKL 418
              +++  +SP           + +       GD  ++L
Sbjct: 187 TQPVRSVAFSPGSKLLAAAGDSKMITIYDVMSGDQVAQL 225


>gi|167893422|ref|ZP_02480824.1| hypothetical protein Bpse7_06662 [Burkholderia pseudomallei 7894]
          Length = 411

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D + V +R +D    +        +   S+ 
Sbjct: 33  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYV-YR-FDTDSGRVSPVSSAKAENPSYL 90

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 91  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 148

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 149 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 208

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 209 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 242

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    +  +       
Sbjct: 243 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLAHVETVPMTAPGF 302

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 303 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 347


>gi|166366436|ref|YP_001658709.1| hypothetical protein MAE_36950 [Microcystis aeruginosa NIES-843]
 gi|166088809|dbj|BAG03517.1| hypothetical protein MAE_36950 [Microcystis aeruginosa NIES-843]
          Length = 481

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 41/243 (16%), Positives = 80/243 (32%), Gaps = 28/243 (11%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           N + L V           SL V+  DG + R L    D  L     SP+ +K   A    
Sbjct: 235 NGKTLIVQRINHGNPGDASLWVISDDGQS-RPLGIQGDIFLL----SPDGKK---AVVSQ 286

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSN 292
              + V  +D +  +        + +     FS +G++ L+   + D    ++ ++    
Sbjct: 287 TGGVAVIPLDVQGGKPQFLPTYEKIL----AFSRDGRQKLMVKSEPDNQRSLFLLN-DQG 341

Query: 293 ATERLTNTLFINISASYSPDSSQIVFE--SD----REGK----EQLYVMQSNGSDQKRIS 342
            +  L  T    IS  + P   + ++   SD     +GK      L +++        + 
Sbjct: 342 ESRLLLRTANPIISCEFEPRQEKTLYCLKSDLVMGSDGKVKEEPFLAIIELKTGKMIPLL 401

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSP 399
                       SP G  + F + +   F +        +   + +      P    +SP
Sbjct: 402 ALPNYRDVQMSMSPDGVALLFDQLATTPFGVR-NDLVTGEGSSIADGRLWLLPLPDQFSP 460

Query: 400 SGR 402
           +  
Sbjct: 461 NST 463


>gi|159484634|ref|XP_001700359.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158272400|gb|EDO98201.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 437

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 74/271 (27%), Gaps = 44/271 (16%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD---EDIL 237
           ++ V SG +  S+ + +              + +    + P  +  A  +          
Sbjct: 179 AKYVASGDMNGSILLWEPGSGRQLGACSGHSKWITSLSWQPAHRPGALPSSRFVSGSKDN 238

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V + D    R    + N  +M+ A  +   G+  + S  +D ++  +  D       R+
Sbjct: 239 TVKVWDAATRRCVLSMSNHSAMVTAVLW--GGEGLIYSASRDCSISAW--DEADGKLVRV 294

Query: 298 TNTLF--------------------------INISASYSPDSSQIVFESDREGKEQLYVM 331
                                           ++   +SPD     F       + + + 
Sbjct: 295 FKGHGHWVNTLALSSGFALRTGAFDHNGKAPADVEVVFSPDGR---FILSASFDKSVKLW 351

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                      +      +   WS    + A          + V      + ++ +    
Sbjct: 352 DGAKGTFLATLRGHVGPVYQVAWSADSRMFASGSKDST---LKVWDARTRKLKVDLPGHA 408

Query: 392 LQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
            +  T  WSP G S+        D   KL+ 
Sbjct: 409 DEVFTVDWSPDGGSVA---SGGKDRVLKLWR 436



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/298 (13%), Positives = 81/298 (27%), Gaps = 60/298 (20%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D +    +         +    +SP+ + VA    +      + L +  
Sbjct: 142 SGSGDTTVRLWDLNTQLPKTECKGHKNWVLVVAWSPDAKYVASGDMNG----SILLWEPG 197

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGK------RALISVQKDEAMDIYSVDLQSNA-TERLT 298
             R           I +  +    +         +S  KD  + ++  D  +      ++
Sbjct: 198 SGRQLGACSGHSKWITSLSWQPAHRPGALPSSRFVSGSKDNTVKVW--DAATRRCVLSMS 255

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA----------- 347
           N   +  +  +      +++ + R+    +           R+ +               
Sbjct: 256 NHSAMVTAVLWG--GEGLIYSASRDCS--ISAWDEADGKLVRVFKGHGHWVNTLALSSGF 311

Query: 348 --------------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                         +  + V+SP G  I    F        V   DG++   L       
Sbjct: 312 ALRTGAFDHNGKAPADVEVVFSPDGRFILSASFDKS-----VKLWDGAKGTFLATLRGHV 366

Query: 394 AP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD---PQWVG 444
            P     WS   R         G   S L   D   R    ++ P +A +     W  
Sbjct: 367 GPVYQVAWSADSRMFA-----SGSKDSTLKVWDARTRKLK-VDLPGHADEVFTVDWSP 418



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 38/264 (14%), Positives = 72/264 (27%), Gaps = 21/264 (7%)

Query: 111 LVTGRVIKEG----KDRLRVEFRLWDVKDRKQII---GKKFFSSPASWRKIAHTISDDIY 163
           ++      +        +     LW+    +Q+    G   + +  SW+  AH       
Sbjct: 170 VLVVAWSPDAKYVASGDMNGSILLWEPGSGRQLGACSGHSKWITSLSWQP-AHRPGALPS 228

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                   D   ++   +       + N   ++         L  S  +      +    
Sbjct: 229 SRFVSGSKDNTVKVWDAATRRCVLSMSNHSAMVTAVLWGGEGLIYSASRDCSISAWDEAD 288

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-----FSSNGKRALISVQK 278
            K+          +    +         R G F     AP      FS +G+  L S   
Sbjct: 289 GKLVRVFKGHGHWVNTLAL---SSGFALRTGAFDHNGKAPADVEVVFSPDGRFIL-SASF 344

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D+++ ++    +      L   +      ++S DS      S       L V  +     
Sbjct: 345 DKSVKLWD-GAKGTFLATLRGHVGPVYQVAWSADSRMFASGSK---DSTLKVWDARTRKL 400

Query: 339 KRISQDKEASYFDPVWSPQGDLIA 362
           K          F   WSP G  +A
Sbjct: 401 KVDLPGHADEVFTVDWSPDGGSVA 424


>gi|156547201|ref|XP_001604302.1| PREDICTED: similar to MGC157150 protein [Nasonia vitripennis]
          Length = 799

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 43/126 (34%), Gaps = 8/126 (6%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L+    D     + V       + ++      +S  +S D S + F +  +G+ +++  
Sbjct: 85  VLLITTSDG--KFHLVSKTGRIEKSVSAHNGATLSGKWSYDGSAL-FTAGEDGQIKIW-- 139

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            S     +  +     S F   WSP    I ++   G    I  +      +R    +  
Sbjct: 140 -SRSGMLRSTAIRGSQSVFASAWSPDNSAILYS--QGSHLLIQSLTTSSKPQRWAAHEGL 196

Query: 392 LQAPTW 397
           +   +W
Sbjct: 197 ILTVSW 202



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 39/289 (13%), Positives = 90/289 (31%), Gaps = 32/289 (11%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            ++   D  Q++  KF     +  K+     DD + +       ++ R    +   V   
Sbjct: 27  EVYSCGDDHQLMSWKFEGGTINA-KVVTEFPDDFHPTDMS----WHPRPAQTNLGAVKKQ 81

Query: 189 IKNSLCVMDRDG--------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
             + L +   DG          I     + +      ++S +   +    +   +  ++ 
Sbjct: 82  AMDVLLITTSDGKFHLVSKTGRIEKSVSAHNGATLSGKWSYDGSAL----FTAGEDGQIK 137

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +           I   +S + A  +S +    L S     +  +      S+  +R    
Sbjct: 138 IWSRSGMLRSTAIRGSQS-VFASAWSPDNSAILYS---QGSHLLIQSLTTSSKPQRWAAH 193

Query: 301 LFINISASYSPDSSQIVFESDREGKEQL-YVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             + ++ S++     IV      G E   + +  +  +    S   +       W   G+
Sbjct: 194 EGLILTVSWNQFHGLIV-----SGAEDCRHKVWDSKGNLLHASLVGDHPITAVNWCFSGN 248

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSNLQAPTWSPSGRSLIFS 407
             A   F+     + +  K G    L  V+  ++    WS  G  +  +
Sbjct: 249 YFAVGSFN----TLKLCDKTGWPHSLEKVQSGSIYDIAWSSDGTQVALA 293


>gi|148252688|ref|YP_001237273.1| transcriptional regulator [Bradyrhizobium sp. BTAi1]
 gi|146404861|gb|ABQ33367.1| putative transcriptional regulatory protein, HTH DNA binding domain
           protein [Bradyrhizobium sp. BTAi1]
          Length = 518

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 63/162 (38%), Gaps = 23/162 (14%)

Query: 49  SIAFTKFVSIDELGGK-------VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQ 101
           +IA   F +I +   +       V ++++  L R     +I+++S    I    ++   +
Sbjct: 125 AIAVLPFTNIGDDPEQEYFADGIVEDIITA-LSRCSGLAVIARNS--SFIYKGKAVDIRE 181

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
               LGA  ++ G V + G  RLR+  +L D      +  ++F         +   IS+ 
Sbjct: 182 VGRELGAGYVLEGSVRRAGS-RLRITGQLIDASSGVHLWAERFDGQIDDVFALQDRISES 240

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           I  +I              +  +V G  + ++  +  D  ++
Sbjct: 241 IVAAIE------------PTLELVEGERRRAMRPLHPDAYDL 270


>gi|157825720|ref|YP_001493440.1| acylamino-acid-releasing protein [Rickettsia akari str. Hartford]
 gi|157799678|gb|ABV74932.1| Acylamino-acid-releasing enzyme [Rickettsia akari str. Hartford]
          Length = 678

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 52/135 (38%), Gaps = 13/135 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYS----PDSSQIVFESDR 322
           +GK  L    +D  ++I+       +  E +TN     I   +S     ++  I++  D 
Sbjct: 52  DGKYILYVAPQDGVLNIWLAPSDDISKAEAITNDKGRGI---WSYTKAYNNKNILYTQDF 108

Query: 323 EG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIGVMK 377
            G   +++Y       + K ++ ++         S   P   LI   + + E F I  + 
Sbjct: 109 NGDENDRIYSYNIETKETKLLTPERGVKAGIAGVSYKKPNEILIYLNERNPEYFDIYKLN 168

Query: 378 KDGSQERLLVEDSNL 392
            D  ++ L+ ++   
Sbjct: 169 LDTLEKELIYKNDRF 183



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 33/79 (41%), Gaps = 3/79 (3%)

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTW--SPSGRSLIFSRKKDGD 413
            G  I +         I +   D  S+   +  D      ++  + + +++++++  +GD
Sbjct: 52  DGKYILYVAPQDGVLNIWLAPSDDISKAEAITNDKGRGIWSYTKAYNNKNILYTQDFNGD 111

Query: 414 TGSKLYSIDLNGRNETLIN 432
              ++YS ++  +   L+ 
Sbjct: 112 ENDRIYSYNIETKETKLLT 130


>gi|307943585|ref|ZP_07658929.1| twin-arginine translocation pathway signal [Roseibium sp.
           TrichSKD4]
 gi|307773215|gb|EFO32432.1| twin-arginine translocation pathway signal [Roseibium sp.
           TrichSKD4]
          Length = 352

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 15/123 (12%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+   ISV  D   ++  V L             I +    SPD   +V  + R G  
Sbjct: 25  PDGRY-AISVLDDAGQELAQVGLPGR-------GHGIAV----SPDRQTLVAFARRPGTF 72

Query: 327 QLYVMQSNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGSQE 383
            L +   +GS+ K IS       Y    +S  G L+      +   +  IG+    G Q 
Sbjct: 73  ALIIRPFDGSEPKLISAIKGRHFYGHGCFSGDGRLMYAVENNYEARRGTIGIYDLSGQQA 132

Query: 384 RLL 386
             +
Sbjct: 133 TRI 135



 Score = 43.1 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 5/113 (4%)

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G+  + V+   G +  ++             SP    +         FA+ +   DGS+
Sbjct: 26  DGRYAISVLDDAGQELAQVGLPGRG--HGIAVSPDRQTLVAFARRPGTFALIIRPFDGSE 83

Query: 383 ERLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            +L+             +S  GR +             +   DL+G+  T I 
Sbjct: 84  PKLISAIKGRHFYGHGCFSGDGRLMYAVENNYEARRGTIGIYDLSGQQATRIG 136


>gi|220672714|emb|CAX14103.1| WD repeat domain 33 [Danio rerio]
          Length = 992

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 65/195 (33%), Gaps = 11/195 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R++P  +++       E      L +         +    S + A  +S N    +++  
Sbjct: 113 RWTPEGRRLVTGASSGEFT----LWNGLTFNFETILQAHDSPVRAMTWSHN-DMWMLTAD 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               +  +  ++ +    +          AS+SP  ++    SD +G  +++        
Sbjct: 168 HGGYVKYWQSNMNNVKMFQ--AHKEAIREASFSPTDNKFATCSD-DGTVRIW--DFLRCH 222

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPT 396
           ++RI +   A      W P   L+       ++       K G     L    + +    
Sbjct: 223 EERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVK 282

Query: 397 WSPSGRSLIFSRKKD 411
           W+ +G  L+ + +  
Sbjct: 283 WNLNGNWLLTASRDH 297


>gi|220909324|ref|YP_002484635.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Cyanothece sp. PCC 7425]
 gi|219865935|gb|ACL46274.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Cyanothece sp. PCC 7425]
          Length = 646

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 11/124 (8%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKEQLYVMQS--NGS 336
           + S+ L   A E +        S + SPD   + + S  +        +L+V +   NGS
Sbjct: 152 LVSLPLTGGAAEIVAEGQDFYASPTISPDGEWLAWLSWNQPQMPWDGTELWVARLQVNGS 211

Query: 337 --DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQ 393
             D ++++     S F P WS +G  + F   + + + +        Q + L    +   
Sbjct: 212 LADVQQVAGSPTESVFQPRWSAEG-WLYFVSDASDWWNLYRWHPSQPQVQPLYPRTAEFG 270

Query: 394 APTW 397
            P W
Sbjct: 271 LPQW 274



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 69/200 (34%), Gaps = 32/200 (16%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G+  ++  +  E +D+      +     + + +      ++  D   + F +  +  +QL
Sbjct: 51  GRTVVVRWRAGETIDL------TPQPFNVRSRVHEYGGGAFRVDQGILYFVNFAD--QQL 102

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK------KDGSQ 382
           Y  Q      + ++Q     Y D V   Q   + + +    +    V+         G  
Sbjct: 103 YR-QVGKEAPEPLTQTPGLRYTDGVVDRQHQRMIWVREDHRRGEHEVINTLVSLPLTGGA 161

Query: 383 ERLLVEDSNLQ-APTWSPSGRSLIFSRKKDGDT---GSKLYSIDL------------NGR 426
             ++ E  +   +PT SP G  L +           G++L+   L             G 
Sbjct: 162 AEIVAEGQDFYASPTISPDGEWLAWLSWNQPQMPWDGTELWVARLQVNGSLADVQQVAGS 221

Query: 427 NETLINTPAYASDPQWVGFM 446
               +  P ++++  W+ F+
Sbjct: 222 PTESVFQPRWSAEG-WLYFV 240


>gi|119490571|ref|ZP_01623013.1| WD repeat protein [Lyngbya sp. PCC 8106]
 gi|119453899|gb|EAW35055.1| WD repeat protein [Lyngbya sp. PCC 8106]
          Length = 550

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 72/219 (32%), Gaps = 33/219 (15%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    ++ + D     ++    S   ++     SP+ + +   + D      + + + 
Sbjct: 254 VSGGEDKAIKIWDLQTGKLKKTLQSDSGVINTLAISPDGKTIVSGSGDR----MIRIWNI 309

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLF- 302
             ++ P+ +      I     S +GK     + +D   +I   D ++   +  L N    
Sbjct: 310 TSNQPPRMLKGHSQNISQVEVSLDGKTI---MSRD-YEEIKVWDFETGELKATLPNLPSR 365

Query: 303 --------INISASY------SPDSSQIV-FESDREGKEQLYVMQSNGSDQKRI--SQDK 345
                   I  + SY      S   + +V F      K ++       ++Q  +     +
Sbjct: 366 EFKMGALVIEDNTSYFNPLTLSSKGTALVKF------KNKIVAWNLTTNEQIPLEKKWFE 419

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
               +    S  G  +  T +S  K  + +      + +
Sbjct: 420 NLDIYSGRISLDGKTVVMTSYSQPKNYLKIWDLKTGKLK 458



 Score = 40.0 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 79/211 (37%), Gaps = 33/211 (15%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           + + D +  +  K + +   +I     S +GK  + S   D  + I+  ++ SN   R+ 
Sbjct: 262 IKIWDLQTGKLKKTLQSDSGVINTLAISPDGKTIV-SGSGDRMIRIW--NITSNQPPRML 318

Query: 299 NTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--------------RISQ 343
                NIS    S D   I+    R+  E++ V      + K               +  
Sbjct: 319 KGHSQNISQVEVSLDGKTIM---SRD-YEEIKVWDFETGELKATLPNLPSREFKMGALVI 374

Query: 344 DKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ----ERLLVEDSNLQAPTWS 398
           +   SYF+P   S +G   A  KF      I       ++    E+   E+ ++ +   S
Sbjct: 375 EDNTSYFNPLTLSSKGT--ALVKFKN---KIVAWNLTTNEQIPLEKKWFENLDIYSGRIS 429

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             G++++ +         K++ +   G+ +T
Sbjct: 430 LDGKTVVMTSYSQPKNYLKIWDLK-TGKLKT 459


>gi|145592977|ref|YP_001157274.1| hypothetical protein Strop_0411 [Salinispora tropica CNB-440]
 gi|145302314|gb|ABP52896.1| hypothetical protein Strop_0411 [Salinispora tropica CNB-440]
          Length = 157

 Score = 46.2 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 19/144 (13%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF----ESDREGKEQLYVMQSNGSDQK 339
           ++   +  +    L + +      ++ PDS Q++      +DR GK    ++  +     
Sbjct: 6   LWMAKIDGSDRRELRDEVSELCGPAWLPDSRQLLVATRITADRSGKG---LVDVSSGK-- 60

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTW- 397
             ++        P W+  G + A     G    I +   DG+ +R +       +  ++ 
Sbjct: 61  -FTEVDHTDGCQPAWAADGTIAA---PDGGDGTIVLTGPDGTDQRTIPRLGYGHEYVSFD 116

Query: 398 ----SPSGRSLIFSRKKDGDTGSK 417
               SP GR +   R     T   
Sbjct: 117 LSSLSPDGRRIALYRSNPARTVGD 140



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 50/133 (37%), Gaps = 16/133 (12%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           +L +   DG++ R L     + L  P + P+ +++  AT    D     L+D    +  +
Sbjct: 5   TLWMAKIDGSDRRELRDEVSE-LCGPAWLPDSRQLLVATRITADRSGKGLVDVSSGKFTE 63

Query: 252 RIGNFRSMILAPRFSSNGKRAL-------ISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +    P ++++G  A        I +   +  D  ++       E ++  L   
Sbjct: 64  V---DHTDGCQPAWAADGTIAAPDGGDGTIVLTGPDGTDQRTIPRLGYGHEYVSFDLS-- 118

Query: 305 ISASYSPDSSQIV 317
              S SPD  +I 
Sbjct: 119 ---SLSPDGRRIA 128



 Score = 37.3 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 5/74 (6%)

Query: 373 IGVMKKDGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRNETL 430
           + + K DGS  R L ++ S L  P W P  R L+ + +   D  G  L  +  +G+   +
Sbjct: 6   LWMAKIDGSDRRELRDEVSELCGPAWLPDSRQLLVATRITADRSGKGLVDVS-SGKFTEV 64

Query: 431 INTPAYASDPQWVG 444
            +T      P W  
Sbjct: 65  DHTDGC--QPAWAA 76


>gi|320105467|ref|YP_004181057.1| 40-residue YVTN family beta-propeller repeat-containing protein
           [Terriglobus saanensis SP1PR4]
 gi|319923988|gb|ADV81063.1| 40-residue YVTN family beta-propeller repeat protein [Terriglobus
           saanensis SP1PR4]
          Length = 355

 Score = 46.2 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/180 (15%), Positives = 54/180 (30%), Gaps = 27/180 (15%)

Query: 266 SSNGKRALISVQKDE-----------------AMDIYSVDLQSNATERLTNTLFINISAS 308
           S +GK   I++                     A  I   D+  N   R+        +  
Sbjct: 78  SPDGKTLYIALSGSPIAGPDVDESTLPPPDKNADGIGVFDVAQNKLVRIIKGGSDPENFD 137

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            S D  Q+ + S+ +    + V+        +  +           SP G  +  T    
Sbjct: 138 VSKDGKQL-YISNED-VSAVSVLDIASGSVVKELKIGAQPEGVK-ISPDGKFVYVTS--E 192

Query: 369 EKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
           E   I V+     +     +     ++  + P G+    + + DG     +  +D+  R 
Sbjct: 193 ETSEIAVLDPVAGKITATFKVGHRPRSVAFMPDGKHAYINAENDGT----VVVVDVARRK 248



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 61/171 (35%), Gaps = 15/171 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           + SP+ + V   + +  +I  +  +  +I    K     RS+     F  +GK A I+ +
Sbjct: 179 KISPDGKFVYVTSEETSEIAVLDPVAGKITATFKVGHRPRSV----AFMPDGKHAYINAE 234

Query: 278 KDEAMDIYSVDLQSN---ATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQS 333
            D    +  VD+         +L     +   A   S D+S++   + R GK  ++ + +
Sbjct: 235 NDGT--VVVVDVARRKVAKAIQLGQPGLVKPMAVLLSADASKLYVSTGRGGK--VFTIDT 290

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                       +  +     SP G  +     +G    + V+    +   
Sbjct: 291 ATDTVLNSVAVGKRPW-GIALSPDGKTLY--SSNGPSNDVAVVDLATNTVT 338


>gi|238503698|ref|XP_002383081.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
 gi|220690552|gb|EED46901.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
          Length = 606

 Score = 46.2 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 58/194 (29%), Gaps = 30/194 (15%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDL 289
           D    +     +   +R+   +G  R       F+  GK         E   +D+++ DL
Sbjct: 237 DSPQPISAKGNELLFNRSAIAVGELRG------FTGRGKEVTYIGNPVESCNIDVFAADL 290

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY---------VMQSNGSDQKR 340
            +    R+T+          SPD    V    R    Q++         ++    +    
Sbjct: 291 TTGKVRRITDHPEYVDPMDVSPDDKWQVILDTRGTGRQMFMAGMRGIPPIIDLIATTVAS 350

Query: 341 ISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---P 395
            +++     F   W     GD           +    +  DG      + D N  A   P
Sbjct: 351 STRNNGPRRFFRPWLLDHDGDR--------GDYYGQQINGDGDGSPGSINDPNWNAGADP 402

Query: 396 TWSPSGRSLIFSRK 409
            WS  G  + +   
Sbjct: 403 KWSHDGTRIAYFEN 416



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 49/152 (32%), Gaps = 9/152 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+   ++V Y     E                +RI +    +     S + K  +I   +
Sbjct: 264 FTGRGKEVTYIGNPVESCNIDVFAADLTTGKVRRITDHPEYVDPMDVSPDDKWQVILDTR 323

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQLY---VMQ 332
                ++   ++      + + +   +++S   +  +  F     D +G    Y    + 
Sbjct: 324 GTGRQMFMAGMRG--IPPIIDLIATTVASSTRNNGPRRFFRPWLLDHDGDRGDYYGQQIN 381

Query: 333 SNGSDQKRISQDKEASYF-DPVWSPQGDLIAF 363
            +G        D   +   DP WS  G  IA+
Sbjct: 382 GDGDGSPGSINDPNWNAGADPKWSHDGTRIAY 413


>gi|145605657|ref|XP_370472.2| hypothetical protein MGG_06969 [Magnaporthe oryzae 70-15]
 gi|145013456|gb|EDJ98097.1| hypothetical protein MGG_06969 [Magnaporthe oryzae 70-15]
          Length = 924

 Score = 46.2 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 62/201 (30%), Gaps = 22/201 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S + +  A A     D L V ++ T  +   +             F   G    +S  
Sbjct: 102 ALSSDGKWCAVA----GDELTVKIVSTTDNTVVRHAREHGRPTKHVSFDPKGSTLTLSCT 157

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFI------NISAS----YSPDSSQIVFESDREGKEQ 327
            D A  IY   L S   E +     I         AS    + PD     F      ++ 
Sbjct: 158 -DGA--IYIYSLTSEQPELIRKIDGILGSLEMESEASGRVVWHPDGR--AFAVPTPTRDI 212

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
             V +++   Q+  +   E       WSP G +IA     G    + + +  G       
Sbjct: 213 EVVSKNDWEKQRVFANGHEGDITAMAWSPNGSMIATAAKDG---KLLIWESRGQSVIARH 269

Query: 388 EDSNLQAPTWSPSGRSLIFSR 408
             +N+    W P    + F+ 
Sbjct: 270 SYANIMDIVWHPKANIVSFTT 290


>gi|94986785|ref|YP_594718.1| hypothetical protein LI0341 [Lawsonia intracellularis PHE/MN1-00]
 gi|94731034|emb|CAJ54397.1| hypothetical protein LI0341 [Lawsonia intracellularis PHE/MN1-00]
          Length = 234

 Score = 46.2 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 44/130 (33%), Gaps = 17/130 (13%)

Query: 31  SIHAFVKVATNSANYSPVSIAFTKFVSIDEL------GGKVSEVVSKD-LQRSDVFNLIS 83
           +    V V   S    P  + F  F    ++      G  +S ++ ++ LQ S +F+ + 
Sbjct: 50  TSQIQVYVYPQSPPVEPTKVLFVPFRVTQQMENFLTVGNNISRIIWQNWLQNS-IFSTLE 108

Query: 84  QDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIK------EGKDRLRVEFRLWDVKDRK 137
              F Q  T              GA ++V G +         G  R+ +   ++DV    
Sbjct: 109 ---FLQNGTAFRPDVSLTIAKQKGANLVVGGYITDFIDGGLSGDTRVSIAIEIYDVSTGN 165

Query: 138 QIIGKKFFSS 147
            I       S
Sbjct: 166 LIWSLSQAGS 175


>gi|305664380|ref|YP_003860667.1| OmpA family protein [Maribacter sp. HTCC2170]
 gi|88708397|gb|EAR00633.1| OmpA family protein [Maribacter sp. HTCC2170]
          Length = 646

 Score = 46.2 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 44/254 (17%), Positives = 87/254 (34%), Gaps = 67/254 (26%)

Query: 245 RIDRAPKRIGNFRSM-ILAPRFSS----NGKRALISVQKDEAMDIYSVDLQSNATERLT- 298
           R  +  K +G+++    L  +FS     + +  + S ++D   +I     +++    +T 
Sbjct: 98  RYSQTLKSLGDYKGAKELMAQFSKITADDVRAGVYSSKEDYLEEI----KKNSGRYEITS 153

Query: 299 ---NTLFINISASYSPDSSQIVFESDREGKE--------------QLYVMQSNGSDQKRI 341
              N+ +   + +Y      ++F SDR+                  LY + ++  D   +
Sbjct: 154 FKYNSPYSEFAPTYYKKG--LIFSSDRDTGNLAKYRHTWNSKDFLDLYSVNTDSLDDNLV 211

Query: 342 SQDKEASYFDPVWS-----PQGDLIAFTKFSGEKFAIGVMKKDGSQERLL---------- 386
            +  E        S       G  + FT+     F  G    D      L          
Sbjct: 212 LKFGENLNTRLHESTSITTADGKYMYFTR---NNFKDGKYITDEKGMVRLKLLRATLVDG 268

Query: 387 -----------VEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLN-----GRNET 429
                       +  +   P++SP  ++L F+    G  G S ++ + ++     G  E 
Sbjct: 269 EWTNIEELPFNSDSYSTAHPSFSPDEKTLYFASDMPGTVGESDIFKVAIDSEGNFGTPEN 328

Query: 430 L---INTPAYASDP 440
           L   INT A  + P
Sbjct: 329 LGSNINTEARETFP 342


>gi|326436946|gb|EGD82516.1| hypothetical protein PTSG_03166 [Salpingoeca sp. ATCC 50818]
          Length = 720

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 9/88 (10%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGI---------IKNSLCVMDRDGANIRYLTPSR 210
           D   +   GE      R+ FV+     G             ++ V D DG+N++ ++   
Sbjct: 248 DSSNKKTLGEVAVRGQRMAFVAWDNGKGRPLGAQYCINRNTAVYVADLDGSNVKQISDDG 307

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILR 238
                 PRFSP+  +V +   + +   R
Sbjct: 308 VHSCLAPRFSPDGARVVWMQTNADGPHR 335



 Score = 43.9 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 30/73 (41%), Gaps = 13/73 (17%)

Query: 313 SSQIVFESDREGKEQ-------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             ++ F +   GK +             +YV   +GS+ K+IS D   S   P +SP G 
Sbjct: 262 GQRMAFVAWDNGKGRPLGAQYCINRNTAVYVADLDGSNVKQISDDGVHSCLAPRFSPDGA 321

Query: 360 LIAFTKFSGEKFA 372
            + + + + +   
Sbjct: 322 RVVWMQTNADGPH 334



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 19/115 (16%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-------------IGVMKKDGSQE 383
           + +  + D          + +G  +AF  +   K               + V   DGS  
Sbjct: 241 NVQLPTTDSSNKKTLGEVAVRGQRMAFVAWDNGKGRPLGAQYCINRNTAVYVADLDGSNV 300

Query: 384 RLLVEDS--NLQAPTWSPSGRSLIFS-RKKDG--DTGSKLYSIDLN-GRNETLIN 432
           + + +D   +  AP +SP G  +++     DG     S + +   + G N TL+ 
Sbjct: 301 KQISDDGVHSCLAPRFSPDGARVVWMQTNADGPHRRASAVVAHTFDTGANTTLVP 355


>gi|321261067|ref|XP_003195253.1| pre-mRNA splicing factor [Cryptococcus gattii WM276]
 gi|317461726|gb|ADV23466.1| pre-mRNA splicing factor, putative [Cryptococcus gattii WM276]
          Length = 615

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 44/269 (16%), Positives = 81/269 (30%), Gaps = 32/269 (11%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  L  +  +G N         Q + +  F+ +  K   A+YD      + L DT   +
Sbjct: 347 TKVKLWDVYNEG-NCLRTFLGHSQAVKDIAFNNSGDKFLSASYDK----HIKLWDTETGK 401

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINIS 306
             +   N +   +  +F+ +G +  I +   +   I   DL+     + T    L    +
Sbjct: 402 CIQAFTNGKIPNV-VKFNPDGDKQHIFMAGMQDKKIIQYDLREREIVQ-TYDQHLGPVNT 459

Query: 307 ASYSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            ++  ++ + V  SD    R     + V+       K I++    S       P     A
Sbjct: 460 ITFVDENRRFVTTSDDKTIRGWDYDIPVV------IKYIAEPYMHSMPAVTLHPSKRYFA 513

Query: 363 FTKFSGEKFAIGVMKKDGSQERLL-------VEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
                     I V   DGS  +                   +SP G+ +       G   
Sbjct: 514 CQSLDN---QILVYSADGSFRQNKKKRFAGHTIAGYACNIGFSPDGKYI---SSGTGSGE 567

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQWVG 444
              +        + L        D  W+ 
Sbjct: 568 MVFWDWKSGKIMKRLKAHKEVVIDHAWLP 596


>gi|296193356|ref|XP_002744484.1| PREDICTED: eukaryotic translation initiation factor 3 subunit B
           isoform 2 [Callithrix jacchus]
          Length = 738

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 213 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 264

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 265 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 310

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 311 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 368

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 369 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 428

Query: 430 LI 431
            +
Sbjct: 429 RV 430



 Score = 43.1 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 395 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 454

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 455 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 507

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      N    + I    +       WSPQG  +          A+  +     
Sbjct: 508 APRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 567

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 568 TVMNIAEHYMASDVEWDPTGRYVV 591


>gi|189203899|ref|XP_001938285.1| dipeptidyl-peptidase 5 precursor [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187985384|gb|EDU50872.1| dipeptidyl-peptidase 5 precursor [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 748

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 16/92 (17%)

Query: 253 IGNFRSMILAPRFSSNGKRALI-SVQKDEA----MDIYSVDLQSNATERLT------NTL 301
           I  F     +P +S++G      S++ D         + +        +LT      +  
Sbjct: 290 IEGFEGASTSPVWSNSGSMVAFLSMKTDGYESDKNQAFIM-HDYTKPSQLTPLYASQDGK 348

Query: 302 F-INISA---SYSPDSSQIVFESDREGKEQLY 329
              + S    S+SPD  ++ F ++  G+  LY
Sbjct: 349 GRWDRSPQSISWSPDDWKLYFTAEEHGRGNLY 380



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 19/93 (20%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQERLLV--------EDS 390
             E +   PVWS  G ++AF     + +        +M  D ++   L         +  
Sbjct: 292 GFEGASTSPVWSNSGSMVAFLSMKTDGYESDKNQAFIMH-DYTKPSQLTPLYASQDGKGR 350

Query: 391 NLQAP---TWSPSGRSLIFSRKKDGDTGSKLYS 420
             ++P   +WSP    L F+ ++ G     LYS
Sbjct: 351 WDRSPQSISWSPDDWKLYFTAEEHGRG--NLYS 381


>gi|110635174|ref|YP_675382.1| hypothetical protein Meso_2841 [Mesorhizobium sp. BNC1]
 gi|110286158|gb|ABG64217.1| WD-40 repeat-containing protein [Chelativorans sp. BNC1]
          Length = 324

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 73/231 (31%), Gaps = 21/231 (9%)

Query: 216 EPRFSP---NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            P  +P       +A A  ++     +            +       +L    + +G+R 
Sbjct: 1   MPTVAPLDLEGHCIAIAWLNNIPHFALADGVVHRLDDGNKSAELHDGLLCAVPTPDGRRL 60

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
              +   E   ++++    +             S +  P  + I F S R     +  ++
Sbjct: 61  ---LTGGEDGKVFALSFDGSVELLAEIGRKWVTSVAAGPQGA-IAFASGR-----VAHVR 111

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                 + +   +  S     ++P+G  +   +++G             +   L      
Sbjct: 112 FADGKIRELQHPR--SVEGLSFAPKGMRLGVARYNGATLHF---PATEGKPAELEWAGAH 166

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              T+SP G  L+ + +++   G KL    ++G++  +   P       W 
Sbjct: 167 TGITFSPDGNFLVTTMQENALHGWKL----VDGKHMRMTGYPGKVKSFSWS 213



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 60/197 (30%), Gaps = 17/197 (8%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G++  +     +  A +  D   + +      + + +    +  ++        V   DG
Sbjct: 57  GRRLLTGGEDGKVFALSF-DGSVELLAEIGRKWVTSVAAGPQGAIAFASGRVAHVRFADG 115

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             IR L   R        F+P   ++  A Y+        L     +  P  +  +    
Sbjct: 116 K-IRELQHPRSVEGL--SFAPKGMRLGVARYNG-----ATLHFPATEGKPAEL-EWAGAH 166

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               FS +G   + ++Q++       VD       R+T       S S+S     +    
Sbjct: 167 TGITFSPDGNFLVTTMQENALHGWKLVD---GKHMRMTGYPGKVKSFSWSVKGRWLA--- 220

Query: 321 DREGKEQLYVMQSNGSD 337
              G     V    G D
Sbjct: 221 -TSGAPAAIVWPFQGKD 236


>gi|319945462|ref|ZP_08019722.1| hypothetical protein HMPREF0551_2571 [Lautropia mirabilis ATCC
           51599]
 gi|319741248|gb|EFV93675.1| hypothetical protein HMPREF0551_2571 [Lautropia mirabilis ATCC
           51599]
          Length = 444

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 77/216 (35%), Gaps = 31/216 (14%)

Query: 246 IDRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNT 300
            D A +++  F     +    F+++G R LI    D    +Y      N  E   RL+  
Sbjct: 93  TDHAEEKLARFARHDYSRRQAFNADGSRILI-GANDGTWHLY----DGNTLEYVERLSK- 146

Query: 301 LFINISASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE------------A 347
              +    + P D   + F         LY +       + ++   +             
Sbjct: 147 PAGDAELQWHPTDPDLLYFMPANGLGMMLYELNVKNGSVREVADFGDRLKKIWPGAAAAW 206

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRS 403
           +  +   S  G    F     E  ++GV   D  ++R+L     +       + SP G+ 
Sbjct: 207 TKAEGAPSADGRYWCFMVDDAEWHSLGVFAWDLKEDRILGKMDTKGDRPDHVSMSPGGKR 266

Query: 404 LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            + S   +G  G++ +++D   +N T ++  +  SD
Sbjct: 267 CVVSGDTEG-VGTRAWTLDF--KNYTQLHHKSEHSD 299


>gi|261329862|emb|CBH12845.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 549

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 73/215 (33%), Gaps = 22/215 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             IR L     ++      SPN++ +   + ++       L +   D         R ++
Sbjct: 246 FRIRTLIGHSARVRCL-SLSPNEKALVSCSNEE---TYATLRNLMADEERGSFSGHRDVV 301

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVF 318
           +   FS +GK    +  KD+ + ++     +  T+ LT      + I   +SPDS +IV 
Sbjct: 302 MCMAFSGDGKYLA-TGSKDKTLTLW----DAAITKVLTVFKHEKVVICCCFSPDSKRIVA 356

Query: 319 -ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              DR       V       Q               +SP G  I           + V  
Sbjct: 357 GCQDR----VCRVWDVMRGAQVVTYSRHCGIIASVCYSPDGGNICSGSSDKT---LRVWG 409

Query: 378 KDGSQERLLVED--SNLQAPTWSPSGRSLIFSRKK 410
            +    R ++      + + ++S  G  + FS  +
Sbjct: 410 AERGGTRTVLSGHVGVVLSCSYSTDGEHI-FSNDE 443


>gi|254444841|ref|ZP_05058317.1| Fibronectin type III domain protein [Verrucomicrobiae bacterium
           DG1235]
 gi|198259149|gb|EDY83457.1| Fibronectin type III domain protein [Verrucomicrobiae bacterium
           DG1235]
          Length = 1358

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 83/274 (30%), Gaps = 44/274 (16%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRD-------GANIRYLTPSRDQILFEPRFSPNQQKV 226
           N  + +     V+G +  +  V   D       GA    ++P  + +     F+      
Sbjct: 66  NDAVSYFVRDEVNGELDYAGFVTQADIGEDALNGARSLAMSPDGEYVYAVSMFAN--SLA 123

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +        L         D     +   RS+++    S +GK   ++   D  + +++
Sbjct: 124 TFDRSAASGALTFVDAVYDSDGGVDGLDGARSIVI----SPDGKNLYVAAYDDSKLSVFT 179

Query: 287 VDLQSNATERLTNTLFIN------ISA---SYSPDSSQ----------IVFESDREGKEQ 327
            +  + A   L      +            ++SPD             +VF  D      
Sbjct: 180 RNSSTGAASFLGVYEEGDQGVEELTEPHALAFSPDGRHLYVALWSNEIVVFSRDSSTGLL 239

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-- 385
            YV +    + +  S+ +  S     +SP G        + +  ++        +  L  
Sbjct: 240 TYVSKLVYLESEPESKKE--SPRGLGFSPDGKFAYVVSNNNDALSVFSRDSASGELTLDG 297

Query: 386 -LVED----SNLQAP---TWSPSGRSLIFSRKKD 411
            +       SN+  P   + S  G+ +  +    
Sbjct: 298 NVFNGSSGISNMDGPHAISISSDGKFIYVAASSS 331



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 91/287 (31%), Gaps = 65/287 (22%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD--- 211
           A T  D +Y S  G  G   +R + +S    +      L V   D + +   T +     
Sbjct: 133 ALTFVDAVYDSDGGVDGLDGARSIVISPDGKN------LYVAAYDDSKLSVFTRNSSTGA 186

Query: 212 --------------QILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI- 253
                         + L EP    FSP+ + +  A + +E ++      T +     ++ 
Sbjct: 187 ASFLGVYEEGDQGVEELTEPHALAFSPDGRHLYVALWSNEIVVFSRDSSTGLLTYVSKLV 246

Query: 254 ---GNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
                  S   +PR   FS +GK A +    ++A+ ++S D  S                
Sbjct: 247 YLESEPESKKESPRGLGFSPDGKFAYVVSNNNDALSVFSRDSASGELTL----------- 295

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
               D +  VF           +   +G     IS D +  Y     S    ++AF + S
Sbjct: 296 ----DGN--VFNGSSG------ISNMDGPHAISISSDGKFIYVAASSSD--AVVAFERNS 341

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAP-TW--SPSGRSLIFSRKKD 411
              +         S      +  ++  P +   SP G  +       
Sbjct: 342 ETGWVTYYQ----SIHAETGDTWDMNGPISIGTSPDGEHVYVGSGSG 384


>gi|172055286|ref|YP_001806613.1| WD repeat-containing protein [Cyanothece sp. ATCC 51142]
 gi|171701567|gb|ACB54547.1| WD-repeat protein [Cyanothece sp. ATCC 51142]
          Length = 761

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/252 (15%), Positives = 85/252 (33%), Gaps = 19/252 (7%)

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
            R   +     +    Q +     +   S+ KI    +  IY+++ G +    +  + + 
Sbjct: 519 GRYAGQLSAATLSQNGQFLASSEITEKRSYIKIWKLSTGQIYRTLFGHRQPIQTLAIHLG 578

Query: 182 ES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
               + SG  K  L      G ++  L   +  +      SP+ + +   + D      +
Sbjct: 579 NRPFIASGSHKIKLWNF-LTGESLLTLFGHKQLVSCL-AISPDGKILISGSIDK----TL 632

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
            + D +     K +   ++ I     S +G+  + S   D+ + ++  DL+S    + LT
Sbjct: 633 RIWDLKTGNLLKTLTGHKNFITTLILSEDGETIV-SGSTDKTIKLW--DLKSGKLLQTLT 689

Query: 299 NTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
             L  +     Y       +F  D  GK  +Y+      +        +        S  
Sbjct: 690 GHLGGLQTFCLYDC----YLFAGDDTGK--IYLWDLKTGNSLSSWNAHQKGIEAIAISED 743

Query: 358 GDLIAFTKFSGE 369
           G  +  +   G+
Sbjct: 744 GQTLVSSCQEGK 755


>gi|254298443|ref|ZP_04965895.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
 gi|157808263|gb|EDO85433.1| conserved hypothetical protein [Burkholderia pseudomallei 406e]
          Length = 411

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D + V +R +D    +        +   S+ 
Sbjct: 33  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYV-YR-FDTDSGRVSPVSSAKAENPSYL 90

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 91  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 148

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 149 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 208

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 209 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 242

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    +  +       
Sbjct: 243 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLAHVETVPMTAPGF 302

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 303 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 347


>gi|149047885|gb|EDM00501.1| similar to cis-Golgi matrix protein GM130 (predicted), isoform
           CRA_a [Rattus norvegicus]
 gi|149047886|gb|EDM00502.1| similar to cis-Golgi matrix protein GM130 (predicted), isoform
           CRA_a [Rattus norvegicus]
          Length = 114

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ + +  A+ D      VY+  T+  R   R+   +  + + RFS +G R + S  
Sbjct: 28  AFSPDGRNLITASDDG----CVYVWGTKSGRLLWRLAGHKGPVKSCRFSPDG-RLVASSS 82

Query: 278 KDEAMDIYSV 287
            D  + ++ V
Sbjct: 83  CDHTIRLWDV 92



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 23/73 (31%), Gaps = 2/73 (2%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              +  G     +    FS +G+   I+   D  + ++          RL        S 
Sbjct: 12  GRVRFYGQHHGEVNCSAFSPDGRNL-ITASDDGCVYVWGT-KSGRLLWRLAGHKGPVKSC 69

Query: 308 SYSPDSSQIVFES 320
            +SPD   +   S
Sbjct: 70  RFSPDGRLVASSS 82



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 28/87 (32%), Gaps = 8/87 (9%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQA 394
            + R             +SP G  +      G    + V      +   RL      +++
Sbjct: 12  GRVRFYGQHHGEVNCSAFSPDGRNLITASDDG---CVYVWGTKSGRLLWRLAGHKGPVKS 68

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +SP GR +  S     D   +L+ +
Sbjct: 69  CRFSPDGRLVASSSC---DHTIRLWDV 92


>gi|119498229|ref|XP_001265872.1| WD repeat protein [Neosartorya fischeri NRRL 181]
 gi|119414036|gb|EAW23975.1| WD repeat protein [Neosartorya fischeri NRRL 181]
          Length = 1359

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 67/438 (15%), Positives = 121/438 (27%), Gaps = 80/438 (18%)

Query: 54  KFVSIDELGGKVSEVVSKDLQ---RSDVFNLISQDSFKQKITNPDSIPRFQ-DWNSLGAQ 109
            F S        +     DL    RS     +   S  Q +T+   IP    D +     
Sbjct: 51  PFFSGSRPPSPQTSTGRADLSAGPRSTRSKSLPGAS--QTVTHKTGIPIAALDISPQRTH 108

Query: 110 VLVTGR----VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
            ++ G+     I+   DRL  EF L     R  II         S     H       + 
Sbjct: 109 AVIGGKEILKTIRVSPDRLSEEFNL-----RNAIISYSSTHHGGSGLSARHK-DQLTVRD 162

Query: 166 ITGEKGDFNSRILFVSESV---VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
           +    G+++  I     +    V  + +  L      G N +          + P    +
Sbjct: 163 VKWSHGNYDRTIATAVANGRIVVYDLNRTGLEYCRFQGHNRQ--VHRLAFNPYAPALLLS 220

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             + +     D          +      + IGN    +   R+S + +    +     A+
Sbjct: 221 GSQDSTIRMWDLRTASAERGVSMCGSKEQYIGNSD-AVRDIRWSPSDRFVFATATDSGAI 279

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKR- 340
            ++     S    R+T       S  + PD   +V      G + Q+ V   + + ++R 
Sbjct: 280 QLWDSRKNSAPLMRITAHDRPCFSVDWHPDGQHVV----SGGTDRQVKVWDFSSTAERRQ 335

Query: 341 ---ISQDKEASYFDPVWSP------QGDL---IAFTKFSGEKFAIGVMKK---------- 378
                     +  +  W P       GD       T +  E   + +             
Sbjct: 336 KPTFQFRTPQAVLNVRWRPPSTDKESGDWQSCQVVTSYDKEDPRVHLWDLRRPHIPFREF 395

Query: 379 ----------------------DGSQERLL--------VEDSNLQAPTWSPSGRSLIFSR 408
                                 +               +      A  WSP+G  L F++
Sbjct: 396 DRYDAHASDLLWHSKDLLWTVGETGAFTQTDIRYAPHVIHQRPTCAAAWSPNGEVLAFTQ 455

Query: 409 KKDGDTGSKLYSIDLNGR 426
           K+   +   L + D   R
Sbjct: 456 KRARRSIMGLRATDFTDR 473


>gi|111305761|gb|AAI21558.1| excision repair cross-complementing rodent repair deficiency,
           complementation group 8 [Xenopus (Silurana) tropicalis]
          Length = 399

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 56/185 (30%), Gaps = 14/185 (7%)

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
             G D + V + L +++  +    K       S   + H  S +  Q    + G F S  
Sbjct: 61  SGGADGIIVLYDLANLRKSQSYTCKALCKVGKSHPDM-HKFSVETVQWYPHDTGIFTSSS 119

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
              +  +          V   DG             ++    SP   K +      ++  
Sbjct: 120 FDKTLKIWDTNSLKLAEVFHFDGT------------VYSHHMSPLATKHSLIAVGTKNP- 166

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +V L D +   +   +   R  +LA  +S      L +   D  + ++ V   S     L
Sbjct: 167 KVQLCDLKSGSSSHILQGHRGEVLAVCWSPRYDYILATASADSKVKLWDVRKASGCLITL 226

Query: 298 TNTLF 302
                
Sbjct: 227 DQHNG 231


>gi|146302267|ref|YP_001196858.1| OmpA/MotB domain-containing protein [Flavobacterium johnsoniae
           UW101]
 gi|146156685|gb|ABQ07539.1| OmpA/MotB domain protein [Flavobacterium johnsoniae UW101]
          Length = 643

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 86/269 (31%), Gaps = 50/269 (18%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG----- 254
           G N +Y          +  F+  +    ++    +     Y      +  P+        
Sbjct: 151 GINSKYSDYGSFVYNNKIYFASARDTGNFSQRRHKWTGEYYTNIYSANIDPQNSTAVKPD 210

Query: 255 ------NFRSMILAPRFSSNGKRALISVQ--------KDEA----MDIYSVDLQSNATER 296
                 N +     P F+ +G     +          KD+     + +Y   L++    +
Sbjct: 211 KFKTALNTKFHESTPVFTKDGNTVYFTRNNYIDGKKGKDDNKITLIKLYKATLENGKWTK 270

Query: 297 LTNTLFINIS-----ASYSPDSSQIVFESDREGK---EQLYVMQSNG----SDQKRISQ- 343
           +T   F + +      + SPD   + F SD  G      +Y +  N        + + + 
Sbjct: 271 ITALPFTSDNYSTAHPALSPDEKTLYFASDMPGSIGQSDIYKVSINSDGNFGTPQNLGKP 330

Query: 344 -DKEASYFDPVWSPQGDLIAFTK-----FSGEKFAIGVMKKDG--SQERLLVEDSNLQAP 395
            + E     P  + + + I F         G    +G   ++G  S  + L  D N    
Sbjct: 331 INTEGKETFPYVTSENE-IYFASDGHPGLGGLDVFVGQFDENGTVSDIQNLGNDINSPKD 389

Query: 396 TWS----PSGRSLIFSRKKDGDTGS-KLY 419
            ++    P  R   FS  KDG  GS  +Y
Sbjct: 390 DFAYIIDPVSRQGYFSSNKDGGMGSDDIY 418



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 58/175 (33%), Gaps = 48/175 (27%)

Query: 314 SQIVFESDREGKE--------------QLYVMQSNGSDQKRISQDKEASYFD-------P 352
           ++I F S R+                  +Y    +  +   +  DK  +  +       P
Sbjct: 166 NKIYFASARDTGNFSQRRHKWTGEYYTNIYSANIDPQNSTAVKPDKFKTALNTKFHESTP 225

Query: 353 VWSPQGDLIAFTKFSG------------EKFAIGVMKKDGSQERLLV------EDSNLQA 394
           V++  G+ + FT+ +                 +     +  +   +       ++ +   
Sbjct: 226 VFTKDGNTVYFTRNNYIDGKKGKDDNKITLIKLYKATLENGKWTKITALPFTSDNYSTAH 285

Query: 395 PTWSPSGRSLIFSRKKDGDTG-SKLYSIDLN-----GRNETL---INTPAYASDP 440
           P  SP  ++L F+    G  G S +Y + +N     G  + L   INT    + P
Sbjct: 286 PALSPDEKTLYFASDMPGSIGQSDIYKVSINSDGNFGTPQNLGKPINTEGKETFP 340


>gi|50309791|ref|XP_454908.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49644043|emb|CAG99995.1| KLLA0E21187p [Kluyveromyces lactis]
          Length = 429

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/271 (14%), Positives = 89/271 (32%), Gaps = 24/271 (8%)

Query: 162 IYQSITGEKGDFNSRILFVSESVV---SGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEP 217
           I +    + G   + + F+ ++     SG   N + + D      +          + + 
Sbjct: 128 IAEYYGHKNG--TTSLRFIPKTGHLLLSGGNDNIIKLWDFYHERELLRTYEGHSMTIKDL 185

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISV 276
            F+ N    A A++D      V + +T      KR+  F S+     F   +  + ++ +
Sbjct: 186 NFTDNGHSFASASFDK----WVKIWNTEKGIIDKRL-RFNSVPNCITFHPKDKNQLVVGL 240

Query: 277 QKDEAMDI-YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              E       +       ++  +     ++  Y PD  +++  S  +   +++  + N 
Sbjct: 241 SNSEIRHYDLRLSENHGEVQKYDHHQGSILALKYFPDGKKLI-SSSEDKTVRIWENRIN- 298

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSN 391
              K+IS   + S      +PQG            +   ++ K                 
Sbjct: 299 IPIKQISGTAQHSMPWIDINPQGQSFCTQSMDNTIYTYSMLPKYKRHPNKTFKGHNTTGY 358

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                +SP G+ +       GD+  + +  D
Sbjct: 359 GIHFAFSPDGQYIA-----SGDSKGQTFIWD 384



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 87/273 (31%), Gaps = 52/273 (19%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQII----GKKFFSSPASWRKIAHTISDDIYQSITG 168
           TG ++  G +   +  +LWD    ++++    G        ++    H+ +   +     
Sbjct: 147 TGHLLLSGGNDNII--KLWDFYHERELLRTYEGHSMTIKDLNFTDNGHSFASASFDK--- 201

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
                         +   GII   L                 + +     F P  +    
Sbjct: 202 ---------WVKIWNTEKGIIDKRLRF---------------NSVPNCITFHPKDKNQLV 237

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--S 286
               + +I    L  +      ++  + +  ILA ++  +GK+  IS  +D+ + I+   
Sbjct: 238 VGLSNSEIRHYDLRLSENHGEVQKYDHHQGSILALKYFPDGKKL-ISSSEDKTVRIWENR 296

Query: 287 VDLQSNATERLTNT-----LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           +++     ++++ T      +I+     +P       +S  +     Y M          
Sbjct: 297 INI---PIKQISGTAQHSMPWID----INPQGQSFCTQS-MDNTIYTYSMLPKYKRHPNK 348

Query: 342 SQDKEASYFDP---VWSPQGDLIAFTKFSGEKF 371
           +     +        +SP G  IA     G+ F
Sbjct: 349 TFKGHNTTGYGIHFAFSPDGQYIASGDSKGQTF 381


>gi|332252126|ref|XP_003275205.1| PREDICTED: TAF5-like RNA polymerase II p300/CBP-associated
           factor-associated factor 65 kDa subunit 5L [Nomascus
           leucogenys]
          Length = 589

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/235 (11%), Positives = 66/235 (28%), Gaps = 22/235 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDM----SIRYWDLGSFTNTVLYQGHAYPVWDLDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+      ++    + P+S+ +   S   
Sbjct: 393 SP--YSLYFASGSHDRTARLWSFDR--TYPLRIYAGHLADVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL----YSIDLNGRNETLIN 432
              L     N+ + T+SP    +  +   +      +     S   +G +  L+ 
Sbjct: 503 YKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVG 557



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 438 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ----RLK 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 494 LWDLASGTLYKELRGHTDNITSLTFSPDSGLIA-SASMDNSVRVWDI 539


>gi|297661695|ref|XP_002809365.1| PREDICTED: LOW QUALITY PROTEIN: TAF5-like RNA polymerase II
           p300/CBP-associated factor-associated factor 65 kDa
           subunit 5L-like [Pongo abelii]
          Length = 563

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/235 (11%), Positives = 66/235 (28%), Gaps = 22/235 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 311 ILRGHCGPVYSTRFLADSSGLLSCSEDM----SIRYWDLGSFTNTVLYQGHAYPVWDLDI 366

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+      ++    + P+S+ +   S   
Sbjct: 367 SP--YSLYFASGSHDRTARLWSFDR--TYPLRIYAGHLADVDCVKFHPNSNYLATGST-- 420

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 421 -DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLA---SAGEDQRLKLWDLASGTL 476

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL----YSIDLNGRNETLIN 432
              L     N+ + T+SP    +  +   +      +     S   +G +  L+ 
Sbjct: 477 YKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVG 531



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 412 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ----RLK 467

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 468 LWDLASGTLYKELRGHTDNITSLTFSPDSGLIA-SASMDNSVRVWDI 513


>gi|296230221|ref|XP_002760612.1| PREDICTED: TAF5-like RNA polymerase II p300/CBP-associated
           factor-associated factor 65 kDa subunit 5L [Callithrix
           jacchus]
          Length = 589

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/235 (11%), Positives = 66/235 (28%), Gaps = 22/235 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDM----SIRYWDLGSFTNTVLYQGHAYPVWDLDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+      ++    + P+S+ +   S   
Sbjct: 393 SP--YSLYFASGSHDRTARLWSFDR--TYPLRIYAGHLADVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL----YSIDLNGRNETLIN 432
              L     N+ + T+SP    +  +   +      +     S   +G +  L+ 
Sbjct: 503 YKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVG 557



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 438 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ----RLK 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 494 LWDLASGTLYKELRGHTDNITSLTFSPDSGLIA-SASMDNSVRVWDI 539


>gi|289614249|emb|CBI59016.1| unnamed protein product [Sordaria macrospora]
          Length = 674

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 19/184 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +S  S   + ++ ++  +G+    +T  ++  + +  +SPN ++             +
Sbjct: 244 VDKSNKSYYGETNMYLLSANGSFDARVTLDKEGPIHDVSWSPNSKEFGVVYGYMPAKTTI 303

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  L PR    FS  G+ AL++   + A  I   DL+     
Sbjct: 304 FNH---------RAVATHSFPLGPRNTIIFSPTGRFALVAGFGNLAGQIDVYDLE-KDYR 353

Query: 296 RLTNTLFINIS-ASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           ++T     N S  ++SPDS  I     S R   +    +   G     +  +     ++ 
Sbjct: 354 KITTIESGNPSVCTWSPDSRYILTATTSPRLRVDNGIKLWHVGGGI--MYNEDMVELYNV 411

Query: 353 VWSP 356
           +W P
Sbjct: 412 IWRP 415



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 11/151 (7%)

Query: 277 QKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSN 334
                 ++Y +    +   R+T +        S+SP+S +  V       K  ++  ++ 
Sbjct: 250 SYYGETNMYLLSANGSFDARVTLDKEGPIHDVSWSPNSKEFGVVYGYMPAKTTIFNHRAV 309

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQ 393
            +    +           ++SP G       F      I V   +    ++   E  N  
Sbjct: 310 ATHSFPL-----GPRNTIIFSPTGRFALVAGFGNLAGQIDVYDLEKDYRKITTIESGNPS 364

Query: 394 APTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
             TWSP  R ++ +        D G KL+ +
Sbjct: 365 VCTWSPDSRYILTATTSPRLRVDNGIKLWHV 395


>gi|301095756|ref|XP_002896977.1| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Phytophthora
           infestans T30-4]
 gi|262108406|gb|EEY66458.1| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Phytophthora
           infestans T30-4]
          Length = 525

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 70/201 (34%), Gaps = 34/201 (16%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
           G       +RLWDV   ++++ ++            H    ++Y     + G        
Sbjct: 339 GTTSFDHTWRLWDVATAQELLLQE-----------GHY--KEVYAIAFQKDGALA----- 380

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
                 +G +  +  V D              + +    F+ N  ++A  + D      V
Sbjct: 381 -----ATGDLNGNGRVWDLRSGKAILPLQGHSKQILSMDFAANGVQLASGSDDR----SV 431

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            + D R  +    I    +++   RFS      L+S   D ++ ++    ++   + +T 
Sbjct: 432 RIWDLRQQKCSYMIPAHSNLVSDVRFSPGSGELLLSASYDSSIKLW----RTRDWKLMTT 487

Query: 300 TLFIN---ISASYSPDSSQIV 317
               +   +SA ++PD   +V
Sbjct: 488 LRGHDGKVMSADFAPDEKHVV 508



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 61/216 (28%), Gaps = 14/216 (6%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       L +  F P    +   ++D        L D    +           + A  F
Sbjct: 318 VLRGHKARLGKVAFHPLGNYIGTTSFDHTWR----LWDVATAQELLLQEGHYKEVYAIAF 373

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREG 324
             +G    ++   D   +    DL+S      L       +S  ++ +  Q+   SD   
Sbjct: 374 QKDG---ALAATGDLNGNGRVWDLRSGKAILPLQGHSKQILSMDFAANGVQLASGSD--- 427

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +          +         D  +SP    +  +        +   +       
Sbjct: 428 DRSVRIWDLRQQKCSYMIPAHSNLVSDVRFSPGSGELLLSASYDSSIKLWRTRDWKLMTT 487

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           L   D  + +  ++P  + ++       D   KL++
Sbjct: 488 LRGHDGKVMSADFAPDEKHVV---SCGFDRTFKLWA 520


>gi|290963128|ref|YP_003494310.1| hypothetical protein SCAB_88511 [Streptomyces scabiei 87.22]
 gi|260652654|emb|CBG75787.1| putative WD-40 repeat protein [Streptomyces scabiei 87.22]
          Length = 1251

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 62/334 (18%), Positives = 116/334 (34%), Gaps = 46/334 (13%)

Query: 129  RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
            ++WDV   KQ+        P  W     T+        TG   D   R+L +S       
Sbjct: 748  QVWDVVHGKQL--------PGDWDNADGTVC------GTGSGADSGERLLRLSPDGRRLA 793

Query: 189  IKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
              +   V   D   G ++            +   SP+ + +A  T DD +I    L    
Sbjct: 794  AVHGTTVTVWDVRGGRSVADFASGGTTGFTQADLSPDGEFLA--TVDDHEIAVWGLASGG 851

Query: 246  IDRAPKRIGNFRSMILAPRFSSN-GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 + +    +  L   +  + G+R   +++  +   + S+DL    T    N     
Sbjct: 852  GLAFHRPLAGAEASDL--TWVPDHGRR---TLRYLDRATVRSLDLTDRLTTARQNPPADA 906

Query: 305  ISASYSPDSSQIVFESDREGKE---QLYVMQSNGSDQKRISQDKEASYFDP----VWSPQ 357
                  PD + +     R GK    +L    +     +R      ++  D      +SP 
Sbjct: 907  T--LLGPDGTTLA-TVTRAGKGYRFELRSTDTPAHPVRRTLGPLPSATRDETPLLAFSPD 963

Query: 358  GDLIAFTKFSGEKFAIG-----VMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSR 408
            G  +A    +    ++         +D +   +L        P       P+GR+L+ +R
Sbjct: 964  GRTLAVADTTSSGGSLRQRFTLWNARDHTVRTVLTTSGAADRPVSAIALGPAGRTLLAAR 1023

Query: 409  KKDGDTGSKLYSIDLNGRNETL--INTPAYASDP 440
                D+G++++    + R+ TL  ++ PA A  P
Sbjct: 1024 SASDDSGAEVWDTRTHRRSGTLHGVSGPALAVRP 1057



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 37/281 (13%), Positives = 72/281 (25%), Gaps = 68/281 (24%)

Query: 221  PNQQKVAYATYDDEDILRVYLMD-----TRIDRAPKRIGNFRSMILAPRF---SSNGKRA 272
            P  +  A+ + D    +   +          +      G         R    S +G+R 
Sbjct: 733  PGGRLAAFCSADGPPQVWDVVHGKQLPGDWDNADGTVCGTGSGADSGERLLRLSPDGRRL 792

Query: 273  LI-----SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR----- 322
                       D        D  S  T   T        A  SPD   +    D      
Sbjct: 793  AAVHGTTVTVWDVRGGRSVADFASGGTTGFTQ-------ADLSPDGEFLATVDDHEIAVW 845

Query: 323  ---EGKEQLYVMQSNGSDQKRISQDKEASYFDPVW------------------------- 354
                G    +     G++   ++   +       +                         
Sbjct: 846  GLASGGGLAFHRPLAGAEASDLTWVPDHGRRTLRYLDRATVRSLDLTDRLTTARQNPPAD 905

Query: 355  ----SPQGDLIAFTKFSGEKFAIGVMKKDGSQERL------LVEDSNLQAP--TWSPSGR 402
                 P G  +A    +G+ +   +   D     +      L   +  + P   +SP GR
Sbjct: 906  ATLLGPDGTTLATVTRAGKGYRFELRSTDTPAHPVRRTLGPLPSATRDETPLLAFSPDGR 965

Query: 403  SLIFS-RKKDGDTGSKLYSID--LNGRNETLINTPAYASDP 440
            +L  +     G +  + +++    +    T++ T   A  P
Sbjct: 966  TLAVADTTSSGGSLRQRFTLWNARDHTVRTVLTTSGAADRP 1006



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 35/234 (14%), Positives = 60/234 (25%), Gaps = 25/234 (10%)

Query: 221  PNQQKVAYATYDDEDILRVYLMDTRIDRAPKR--IGNFRSMIL--AP--RFSSNGKRALI 274
            P+   +A  T       R  L  T     P R  +G   S      P   FS +G+   +
Sbjct: 911  PDGTTLATVT-RAGKGYRFELRSTDTPAHPVRRTLGPLPSATRDETPLLAFSPDGRTLAV 969

Query: 275  ---SVQKDEAMDIYSV--DLQSNATERLTNTLFIN--ISA-SYSPDSSQIVFESDREGKE 326
               +         +++           LT +   +  +SA +  P    ++         
Sbjct: 970  ADTTSSGGSLRQRFTLWNARDHTVRTVLTTSGAADRPVSAIALGPAGRTLLAARSASDDS 1029

Query: 327  QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
               V  +    +                 P G L+              +       R L
Sbjct: 1030 GAEVWDTRTHRRSGTLHGVSGPALAVR--PDGRLLV-----DSGDQYAGLPTGKVTGRAL 1082

Query: 387  VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
             +   + A  ++P G  L      D      L+  DL      L  T       
Sbjct: 1083 ADGRQVTALAFTPDGARLAVG---DSTGHVTLWDRDLRRTTGVLTGTADTVPSG 1133


>gi|225678196|gb|EEH16480.1| WD repeat-containing protein 5B [Paracoccidioides brasiliensis
           Pb03]
          Length = 515

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 57/139 (41%), Gaps = 9/139 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           + E +VS     ++ + D   +N          + +    FSP+   +A A++D+     
Sbjct: 370 IIERLVSASDDFTMFLWDPVSSNKPVARMLGHQKEVNHVTFSPDGAYIASASFDN----H 425

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
           V L + R  +    +      +    FS++  R L+S  KD  + ++  D+++      L
Sbjct: 426 VKLWNARDGKFISSLRGHVGAVYQCCFSAD-SRLLVSSSKDTTLKVW--DVRTGKLSMDL 482

Query: 298 TNTLFINISASYSPDSSQI 316
              L    +  +SPD  ++
Sbjct: 483 PGHLDEVYAVDWSPDGEKV 501



 Score = 40.8 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 34/121 (28%), Gaps = 5/121 (4%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                 ++   R+   +  +    FS +G     S   D  + +++          L   
Sbjct: 386 WDPVSSNKPVARMLGHQKEVNHVTFSPDGAYIA-SASFDNHVKLWNA-RDGKFISSLRGH 443

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +       +S DS  +V  S       L V                   +   WSP G+ 
Sbjct: 444 VGAVYQCCFSADSRLLVSSSK---DTTLKVWDVRTGKLSMDLPGHLDEVYAVDWSPDGEK 500

Query: 361 I 361
           +
Sbjct: 501 V 501



 Score = 37.7 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/97 (13%), Positives = 30/97 (30%), Gaps = 4/97 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I   S       + +  +         +    + +   +S    L+  +   
Sbjct: 409 TFSPDGAYIASASF---DNHVKLWNARDGKFISSLRGHVGAVYQCCFSADSRLLV-SSSK 464

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                +  ++       L      + A  WSP G  +
Sbjct: 465 DTTLKVWDVRTGKLSMDLPGHLDEVYAVDWSPDGEKV 501


>gi|195495539|ref|XP_002095310.1| GE19765 [Drosophila yakuba]
 gi|194181411|gb|EDW95022.1| GE19765 [Drosophila yakuba]
          Length = 629

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 58/144 (40%), Gaps = 11/144 (7%)

Query: 199 DGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GN 255
           DG  ++ +         ++  +FSP+  K+A  + D   I+          +  + + G 
Sbjct: 299 DGFPMQTIQILTDHCDEVWFCKFSPDGLKLATGSKDSTVIIWDVDPYKLTLKHRRVLDGQ 358

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPD 312
            +  +    +S + K  L+   +D + ++Y  ++       +  +  +  S    ++S D
Sbjct: 359 AQLSVSFVSWSPDSKLILVGGTED-SHELYIWNVDDGKLV-VKFSQSLEDSLACGAFSRD 416

Query: 313 SSQIVFESDREGKEQLYVMQSNGS 336
            ++ V       K QLY+   NG+
Sbjct: 417 GARFVCG---GQKGQLYLCDLNGT 437



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 11/146 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLF-INISA-SYSPDSSQIVFES 320
           FS +G +   +  KD  + I+ VD    +    R+ +    +++S  S+SPDS +++   
Sbjct: 321 FSPDGLKLA-TGSKDSTVIIWDVDPYKLTLKHRRVLDGQAQLSVSFVSWSPDS-KLILVG 378

Query: 321 DREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             E   +LY+   +      + SQ  E S     +S  G         G+K  + +   +
Sbjct: 379 GTEDSHELYIWNVDDGKLVVKFSQSLEDSLACGAFSRDGARFV---CGGQKGQLYLCDLN 435

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
           G+      E   + +  +    ++++
Sbjct: 436 GTIVDSW-EGVRVNSIAFRADNKTIL 460


>gi|195348567|ref|XP_002040820.1| GM22377 [Drosophila sechellia]
 gi|195592166|ref|XP_002085807.1| GD14968 [Drosophila simulans]
 gi|194122330|gb|EDW44373.1| GM22377 [Drosophila sechellia]
 gi|194197816|gb|EDX11392.1| GD14968 [Drosophila simulans]
          Length = 630

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 58/144 (40%), Gaps = 11/144 (7%)

Query: 199 DGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GN 255
           DG  ++ +         ++  +FSP+  K+A  + D   I+          +  + + G 
Sbjct: 300 DGFPMQTIQILTDHCDEVWFCKFSPDGLKLATGSKDSTVIIWDVDPYKLTLKHRRVLDGQ 359

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPD 312
            +  +    +S + K  L+   +D + ++Y  ++       +  +  +  S    ++S D
Sbjct: 360 AQLSVSFVSWSPDSKLILVGGTED-SHELYIWNVDDGKLV-VKFSQSLEDSLACGAFSRD 417

Query: 313 SSQIVFESDREGKEQLYVMQSNGS 336
            ++ V       K QLY+   NG+
Sbjct: 418 GARFVCG---GQKGQLYLCDLNGT 438



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 11/146 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLF-INISA-SYSPDSSQIVFES 320
           FS +G +   +  KD  + I+ VD    +    R+ +    +++S  S+SPDS +++   
Sbjct: 322 FSPDGLKLA-TGSKDSTVIIWDVDPYKLTLKHRRVLDGQAQLSVSFVSWSPDS-KLILVG 379

Query: 321 DREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             E   +LY+   +      + SQ  E S     +S  G         G+K  + +   +
Sbjct: 380 GTEDSHELYIWNVDDGKLVVKFSQSLEDSLACGAFSRDGARFV---CGGQKGQLYLCDLN 436

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
           G+      E   + +  +    ++++
Sbjct: 437 GTIVDSW-EGVRVNSIAFRADNKTIL 461


>gi|194875651|ref|XP_001973639.1| GG16194 [Drosophila erecta]
 gi|190655422|gb|EDV52665.1| GG16194 [Drosophila erecta]
          Length = 630

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 58/144 (40%), Gaps = 11/144 (7%)

Query: 199 DGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GN 255
           DG  ++ +         ++  +FSP+  K+A  + D   I+          +  + + G 
Sbjct: 300 DGFPMQTIQILTDHCDEVWFCKFSPDGLKLATGSKDSTVIIWDVDPYKLTLKHRRVLDGQ 359

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPD 312
            +  +    +S + K  L+   +D + ++Y  ++       +  +  +  S    ++S D
Sbjct: 360 AQLSVSFVSWSPDSKLILVGGTED-SHELYIWNVDDGKLV-VKFSQSLEDSLACGAFSRD 417

Query: 313 SSQIVFESDREGKEQLYVMQSNGS 336
            ++ V       K QLY+   NG+
Sbjct: 418 GARFVCG---GQKGQLYLCDLNGT 438



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 11/146 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLF-INISA-SYSPDSSQIVFES 320
           FS +G +   +  KD  + I+ VD    +    R+ +    +++S  S+SPDS +++   
Sbjct: 322 FSPDGLKLA-TGSKDSTVIIWDVDPYKLTLKHRRVLDGQAQLSVSFVSWSPDS-KLILVG 379

Query: 321 DREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             E   +LY+   +      + SQ  E S     +S  G         G+K  + +   +
Sbjct: 380 GTEDSHELYIWNVDDGKLVVKFSQSLEDSLACGAFSRDGARFV---CGGQKGQLYLCDLN 436

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
           G+      E   + +  +    ++++
Sbjct: 437 GTIVDSW-EGVRVNSIAFRADNKTIL 461


>gi|76811174|ref|YP_332751.1| YkgB [Burkholderia pseudomallei 1710b]
 gi|126440019|ref|YP_001058232.1| hypothetical protein BURPS668_1183 [Burkholderia pseudomallei 668]
 gi|167918143|ref|ZP_02505234.1| hypothetical protein BpseBC_06290 [Burkholderia pseudomallei
           BCC215]
 gi|217419724|ref|ZP_03451230.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
 gi|76580627|gb|ABA50102.1| YkgB [Burkholderia pseudomallei 1710b]
 gi|126219512|gb|ABN83018.1| conserved hypothetical protein [Burkholderia pseudomallei 668]
 gi|217397028|gb|EEC37044.1| conserved hypothetical protein [Burkholderia pseudomallei 576]
          Length = 411

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D + V +R +D    +        +   S+ 
Sbjct: 33  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYV-YR-FDTDSGRVSPVSSAKAENPSYL 90

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 91  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 148

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 149 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 208

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 209 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 242

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    +  +       
Sbjct: 243 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLAHVETVPMTAPGF 302

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 303 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 347


>gi|21358077|ref|NP_649326.1| CG7611, isoform A [Drosophila melanogaster]
 gi|24668148|ref|NP_730644.1| CG7611, isoform B [Drosophila melanogaster]
 gi|24668152|ref|NP_730645.1| CG7611, isoform C [Drosophila melanogaster]
 gi|24668156|ref|NP_730646.1| CG7611, isoform D [Drosophila melanogaster]
 gi|24668160|ref|NP_730647.1| CG7611, isoform E [Drosophila melanogaster]
 gi|24668164|ref|NP_730648.1| CG7611, isoform J [Drosophila melanogaster]
 gi|24668168|ref|NP_730649.1| CG7611, isoform G [Drosophila melanogaster]
 gi|24668172|ref|NP_730650.1| CG7611, isoform H [Drosophila melanogaster]
 gi|281366571|ref|NP_001163489.1| CG7611, isoform I [Drosophila melanogaster]
 gi|122129609|sp|Q7K0L4|WDR26_DROME RecName: Full=WD repeat-containing protein 26 homolog
 gi|10726934|gb|AAF51739.2| CG7611, isoform A [Drosophila melanogaster]
 gi|10726935|gb|AAG22180.1| CG7611, isoform B [Drosophila melanogaster]
 gi|10726936|gb|AAG22181.1| CG7611, isoform D [Drosophila melanogaster]
 gi|17862770|gb|AAL39862.1| LP01609p [Drosophila melanogaster]
 gi|23094241|gb|AAG22182.2| CG7611, isoform C [Drosophila melanogaster]
 gi|23094242|gb|AAN12172.1| CG7611, isoform E [Drosophila melanogaster]
 gi|23094243|gb|AAN12173.1| CG7611, isoform J [Drosophila melanogaster]
 gi|23094244|gb|AAN12174.1| CG7611, isoform G [Drosophila melanogaster]
 gi|23094245|gb|AAN12175.1| CG7611, isoform H [Drosophila melanogaster]
 gi|220947524|gb|ACL86305.1| CG7611-PA [synthetic construct]
 gi|272455265|gb|ACZ94760.1| CG7611, isoform I [Drosophila melanogaster]
          Length = 630

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 58/144 (40%), Gaps = 11/144 (7%)

Query: 199 DGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GN 255
           DG  ++ +         ++  +FSP+  K+A  + D   I+          +  + + G 
Sbjct: 300 DGFPMQTIQILTDHCDEVWFCKFSPDGLKLATGSKDSTVIIWDVDPYKLTLKHRRVLDGQ 359

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPD 312
            +  +    +S + K  L+   +D + ++Y  ++       +  +  +  S    ++S D
Sbjct: 360 AQLSVSFVSWSPDSKLILVGGTED-SHELYIWNVDDGKLV-VKFSQSLEDSLACGAFSRD 417

Query: 313 SSQIVFESDREGKEQLYVMQSNGS 336
            ++ V       K QLY+   NG+
Sbjct: 418 GARFVCG---GQKGQLYLCDLNGT 438



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 11/146 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLF-INISA-SYSPDSSQIVFES 320
           FS +G +   +  KD  + I+ VD    +    R+ +    +++S  S+SPDS +++   
Sbjct: 322 FSPDGLKLA-TGSKDSTVIIWDVDPYKLTLKHRRVLDGQAQLSVSFVSWSPDS-KLILVG 379

Query: 321 DREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             E   +LY+   +      + SQ  E S     +S  G         G+K  + +   +
Sbjct: 380 GTEDSHELYIWNVDDGKLVVKFSQSLEDSLACGAFSRDGARFV---CGGQKGQLYLCDLN 436

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
           G+      E   + +  +    ++++
Sbjct: 437 GTIVDSW-EGVRVNSIAFRADNKTIL 461


>gi|7657439|ref|NP_055224.1| TAF5-like RNA polymerase II p300/CBP-associated factor-associated
           factor 65 kDa subunit 5L isoform a [Homo sapiens]
 gi|114573097|ref|XP_514261.2| PREDICTED: TAF5-like RNA polymerase II, p300/CBP-associated factor
           (PCAF)-associated factor, 65kDa isoform 2 [Pan
           troglodytes]
 gi|46577305|sp|O75529|TAF5L_HUMAN RecName: Full=TAF5-like RNA polymerase II p300/CBP-associated
           factor-associated factor 65 kDa subunit 5L; AltName:
           Full=PCAF-associated factor 65 beta; Short=PAF65-beta
 gi|3335561|gb|AAC39906.1| PCAF associated factor 65 beta [Homo sapiens]
 gi|56204080|emb|CAI22015.1| TAF5-like RNA polymerase II, p300/CBP-associated factor
           (PCAF)-associated factor, 65kDa [Homo sapiens]
 gi|119590308|gb|EAW69902.1| TAF5-like RNA polymerase II, p300/CBP-associated factor
           (PCAF)-associated factor, 65kDa, isoform CRA_a [Homo
           sapiens]
          Length = 589

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/235 (11%), Positives = 66/235 (28%), Gaps = 22/235 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDM----SIRYWDLGSFTNTVLYQGHAYPVWDLDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+      ++    + P+S+ +   S   
Sbjct: 393 SP--YSLYFASGSHDRTARLWSFDR--TYPLRIYAGHLADVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL----YSIDLNGRNETLIN 432
              L     N+ + T+SP    +  +   +      +     S   +G +  L+ 
Sbjct: 503 YKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVG 557



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 438 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ----RLK 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 494 LWDLASGTLYKELRGHTDNITSLTFSPDSGLIA-SASMDNSVRVWDI 539


>gi|226493870|ref|NP_001146629.1| hypothetical protein LOC100280227 [Zea mays]
 gi|219888091|gb|ACL54420.1| unknown [Zea mays]
          Length = 450

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 64/205 (31%), Gaps = 14/205 (6%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
           T  D+   +        +  + F++ +  SG+    +           +     +  +  
Sbjct: 232 TYDDNAITNAVEIFNTSSGAVHFIASNNDSGVRYYDMERFQL------FKHLQFEWPVNH 285

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              S +++ V        D     L+D    +    I   R    A  +S +G+    + 
Sbjct: 286 ASLSSDRKVVVIV----GDDPDGLLIDANSGKTLHSIKGHRDYSFASAWSPDGRTFA-TG 340

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            +D+   I+     S +   L   L    S  ++ D     F S  E  + ++V      
Sbjct: 341 NQDKTCRIWDARNLSKSVHVLRGNLGAIRSIRFTSDGQ---FMSMAEPADFVHVYDVKSD 397

Query: 337 DQKRISQDKEASYFDPVWSPQGDLI 361
             KR   D         +SP  D +
Sbjct: 398 YNKRQELDFFGEISGTSFSPDTDAL 422


>gi|194374953|dbj|BAG62591.1| unnamed protein product [Homo sapiens]
          Length = 738

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 213 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 264

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 265 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 310

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 311 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 368

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 369 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 428

Query: 430 LI 431
            +
Sbjct: 429 RV 430



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 395 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 454

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 455 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 507

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      N    + I    +       WSPQG  +          A+  +     
Sbjct: 508 APRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 567

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 568 TVMNIAEHYMASDVEWDPTGRYVV 591


>gi|156355398|ref|XP_001623655.1| predicted protein [Nematostella vectensis]
 gi|156210376|gb|EDO31555.1| predicted protein [Nematostella vectensis]
          Length = 464

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 62/186 (33%), Gaps = 20/186 (10%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P   + +    FSP+ + +A  + D    +R + + T       +      + +A  +S 
Sbjct: 96  PGHTEAVISVAFSPDGRYLASGSGDT--TVRFWDVTTETPHFTCKGHMHWILHIA--WSP 151

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASY-----SPDSSQIVFES 320
           +GK+   S  K+  + I+  D  +     + L   L      S+     +PD   +   S
Sbjct: 152 DGKKLA-SGCKNGEIRIW--DPATGKQMGKTLKGHLKWITWLSWEPLHRNPDCRYLASSS 208

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + +  +      +       S     W   G+ + ++        +   + DG
Sbjct: 209 K---DSSVKIWDTATGSVDKTFSSHTQSVTCVKW--GGEGLIYSASQDRTIKVWRAE-DG 262

Query: 381 SQERLL 386
              R L
Sbjct: 263 VLCRTL 268



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 53/176 (30%), Gaps = 22/176 (12%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    I      +++  FS +G+    S   D  +  + V   +  T   T    +  
Sbjct: 88  VTRCTSSIPGHTEAVISVAFSPDGRYLA-SGSGDTTVRFWDV---TTETPHFTCKGHMHW 143

Query: 304 NISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQ------KRISQDKEASYFDPVWS 355
            +  ++SPD  ++       G    ++ +       Q        +      S+     +
Sbjct: 144 ILHIAWSPDGKKLA-----SGCKNGEIRIWDPATGKQMGKTLKGHLKWITWLSWEPLHRN 198

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           P    +A +        I         +       ++    W   G  LI+S  +D
Sbjct: 199 PDCRYLA-SSSKDSSVKIWDTATGSVDKTFSSHTQSVTCVKWG--GEGLIYSASQD 251



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 61/153 (39%), Gaps = 13/153 (8%)

Query: 181 SESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +E +VSG    +L + + +              ++ +  FSP+ + +A A +D      V
Sbjct: 323 AERLVSGSDDFTLFLWEPEAKTKPIARMTGHQALINQVCFSPDGRLIASAAFDK----SV 378

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LT 298
            L +    +    +    + +    +S++  R + S   D  + ++  D+++      L 
Sbjct: 379 KLWNGETGKFITSLRGHVNCVYQIAWSAD-CRLICSGSADSTLKVW--DMKTKKLLYDLP 435

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
                  S  +SPD +++       GK+++  M
Sbjct: 436 GHADEVYSVDWSPDGARV----GSGGKDKVLKM 464



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/114 (13%), Positives = 39/114 (34%), Gaps = 11/114 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+ +K+A  +      +R++   T 
Sbjct: 116 SGSGDTTVRFWDVTTETPHFTCKGHMHWILHIAWSPDGKKLA--SGCKNGEIRIWDPATG 173

Query: 246 IDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNAT 294
                   G+ + +     +     + + +    S  KD ++ I+  D  + + 
Sbjct: 174 KQMGKTLKGHLKWITWL-SWEPLHRNPDCRYLA-SSSKDSSVKIW--DTATGSV 223



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 42/132 (31%), Gaps = 4/132 (3%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  + ++  + ++    R+T    +     +SPD   I   +     + + +  
Sbjct: 326 LVSGSDDFTLFLWEPEAKTKPIARMTGHQALINQVCFSPDGRLIASAAF---DKSVKLWN 382

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +      +   WS    LI  +  +     +  MK       L      +
Sbjct: 383 GETGKFITSLRGHVNCVYQIAWSADCRLIC-SGSADSTLKVWDMKTKKLLYDLPGHADEV 441

Query: 393 QAPTWSPSGRSL 404
            +  WSP G  +
Sbjct: 442 YSVDWSPDGARV 453


>gi|134281174|ref|ZP_01767883.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
 gi|134247480|gb|EBA47565.1| conserved hypothetical protein [Burkholderia pseudomallei 305]
          Length = 411

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D + V +R +D    +        +   S+ 
Sbjct: 33  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYV-YR-FDTDSGRVSPVSSAKAENPSYL 90

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 91  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 148

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 149 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHST 208

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 209 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 242

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    +  +       
Sbjct: 243 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLAHVETVPMTAPGF 302

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 303 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 347


>gi|119172811|ref|XP_001238951.1| hypothetical protein CIMG_09973 [Coccidioides immitis RS]
          Length = 422

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 41/266 (15%), Positives = 83/266 (31%), Gaps = 52/266 (19%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G   ++  + D D     +        +    +SPN + +A  + D+     V 
Sbjct: 158 SSRMATGSGDSTARIWDCDTGTPIHTLKGHSSWVLAVSWSPNDKILATGSMDN----TVR 213

Query: 241 LMDTRIDRA-PKRIGNFRSMILAPRFSS----N-GKRALISVQKDEAMDIYSVDLQSNAT 294
           L D +  +A    +      I++  +      + G+  L S  KD  + I+ V +     
Sbjct: 214 LWDPKTGQALGAPLKGHTKWIMSLAWEPYHLQDPGRPRLASASKDSTVRIWDV-VSKRIE 272

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------------ 342
             LT          +       ++ S  +   +++    +GS  + +S            
Sbjct: 273 NVLTGHKGSVSCVRWG--GMARIYTSSHDKTIKIWN-PKDGSLIQTLSSHTHRVNHLALS 329

Query: 343 -----QDKEASYFDPVWSPQGDLIAFTKFS------------------GEKFAIGVMKKD 379
                +     +  PV     D IA  K                     + F + +    
Sbjct: 330 TDFFLRTSFYEHNTPVPDSDTDRIALAKRRFEKAATINGKLTERLVSASDDFTMFLWDPA 389

Query: 380 GSQE---RLLVEDSNLQAPTWSPSGR 402
            S +   R+L     +   T+SP G 
Sbjct: 390 SSNKPISRMLGHQKEVNHVTFSPDGS 415


>gi|73993996|ref|XP_534608.2| PREDICTED: similar to Autophagy protein 16-like (APG16-like)
           isoform 1 [Canis familiaris]
          Length = 588

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 61/323 (18%), Positives = 113/323 (34%), Gaps = 55/323 (17%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 312 SPGSRLLATG-----GMDR---RVKLWEVFGDKCEFKGSLSGSNAGITSIEF---DSAGS 360

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 361 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 402

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 403 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 454

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L ++     +  R +  
Sbjct: 455 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKIIDLR-INAVRQTFS 508

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 509 APGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSV--LSGKVEKVLSKQHGSSINAVAW 566

Query: 398 SPSGRSLIFSRKKDGDTGSKLYS 420
           SPSG  ++     D  + + L+S
Sbjct: 567 SPSGSHVV---SVDKGSKAVLWS 586


>gi|73993998|ref|XP_862068.1| PREDICTED: similar to Autophagy protein 16-like (APG16-like)
           isoform 3 [Canis familiaris]
          Length = 623

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 61/323 (18%), Positives = 113/323 (34%), Gaps = 55/323 (17%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 347 SPGSRLLATG-----GMDR---RVKLWEVFGDKCEFKGSLSGSNAGITSIEF---DSAGS 395

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 396 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 437

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 438 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 489

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L ++     +  R +  
Sbjct: 490 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKIIDLR-INAVRQTFS 543

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 544 APGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSV--LSGKVEKVLSKQHGSSINAVAW 601

Query: 398 SPSGRSLIFSRKKDGDTGSKLYS 420
           SPSG  ++     D  + + L+S
Sbjct: 602 SPSGSHVV---SVDKGSKAVLWS 621


>gi|73993994|ref|XP_850664.1| PREDICTED: similar to Autophagy protein 16-like (APG16-like)
           isoform 2 [Canis familiaris]
          Length = 607

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 61/323 (18%), Positives = 113/323 (34%), Gaps = 55/323 (17%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 331 SPGSRLLATG-----GMDR---RVKLWEVFGDKCEFKGSLSGSNAGITSIEF---DSAGS 379

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 380 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 421

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 422 RIVSGSHDR----TLKLWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 473

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +   +P+ ++++  S     + L ++     +  R +  
Sbjct: 474 W--DIRSESIVREMELLGKITALDLNPERTELLSCSR---DDLLKIIDLR-INAVRQTFS 527

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S++ A  W
Sbjct: 528 APGFKCGSDWTRVVFSPDGGYVAAGSAEGSLYIWSV--LSGKVEKVLSKQHGSSINAVAW 585

Query: 398 SPSGRSLIFSRKKDGDTGSKLYS 420
           SPSG  ++     D  + + L+S
Sbjct: 586 SPSGSHVV---SVDKGSKAVLWS 605


>gi|82943650|dbj|BAE48801.1| saponin hydrolase precursor [Aspergillus oryzae]
          Length = 633

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 58/194 (29%), Gaps = 30/194 (15%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--AMDIYSVDL 289
           D    +     +   +R+   +G  R       F+  GK         E   +D+++ DL
Sbjct: 264 DSPQPISAKGNELLFNRSAIAVGELRG------FTGRGKEVTYIGNPVESCNIDVFAADL 317

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY---------VMQSNGSDQKR 340
            +    R+T+          SPD    V    R    Q++         ++    +    
Sbjct: 318 TTGKVRRITDHPEYVDPMDVSPDDKWQVILDTRGTGRQMFMAGMRGIPPIIDLIATTVAS 377

Query: 341 ISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---P 395
            +++     F   W     GD           +    +  DG      + D N  A   P
Sbjct: 378 STRNNGPRRFFRPWLLDHDGDR--------GDYYGQQINGDGDGSPGSINDPNWNAGADP 429

Query: 396 TWSPSGRSLIFSRK 409
            WS  G  + +   
Sbjct: 430 KWSHDGTRIAYFEN 443



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 49/152 (32%), Gaps = 9/152 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+   ++V Y     E                +RI +    +     S + K  +I   +
Sbjct: 291 FTGRGKEVTYIGNPVESCNIDVFAADLTTGKVRRITDHPEYVDPMDVSPDDKWQVILDTR 350

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQLY---VMQ 332
                ++   ++      + + +   +++S   +  +  F     D +G    Y    + 
Sbjct: 351 GTGRQMFMAGMRG--IPPIIDLIATTVASSTRNNGPRRFFRPWLLDHDGDRGDYYGQQIN 408

Query: 333 SNGSDQKRISQDKEASYF-DPVWSPQGDLIAF 363
            +G        D   +   DP WS  G  IA+
Sbjct: 409 GDGDGSPGSINDPNWNAGADPKWSHDGTRIAY 440


>gi|51094703|gb|EAL23952.1| eukaryotic translation initiation factor 3, subunit 9 eta, 116kDa
           [Homo sapiens]
 gi|119607644|gb|EAW87238.1| eukaryotic translation initiation factor 3, subunit 9 eta, 116kDa,
           isoform CRA_b [Homo sapiens]
          Length = 775

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 250 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 301

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 302 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 347

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 348 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 405

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 406 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 465

Query: 430 LI 431
            +
Sbjct: 466 RV 467



 Score = 43.1 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 432 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 491

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 492 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 544

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      N    + I    +       WSPQG  +          A+  +     
Sbjct: 545 APRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 604

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 605 TVMNIAEHYMASDVEWDPTGRYVV 628


>gi|326435517|gb|EGD81087.1| hypothetical protein PTSG_11032 [Salpingoeca sp. ATCC 50818]
          Length = 228

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 48/149 (32%), Gaps = 8/149 (5%)

Query: 185 VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
            SG +  + CVM   D              +    + PN + V      D     V   D
Sbjct: 47  GSGSMDKTACVMRLTDRLTRELELRGHSGSVDFLTWHPNNKSVLATASSDHH---VKFWD 103

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R           +   +  R++ +G    +   +D    +  +D ++    +     + 
Sbjct: 104 VRTGPKCTSTVPTKRPSICVRYAPDGNTLAVVNLED---TLMLIDAKTGKVTKSRQFNYE 160

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQ 332
               ++      + F ++R+G+ ++Y   
Sbjct: 161 VNEFTWDKSGKHL-FLTNRQGRVEVYTFP 188


>gi|256423389|ref|YP_003124042.1| hypothetical protein Cpin_4395 [Chitinophaga pinensis DSM 2588]
 gi|256038297|gb|ACU61841.1| conserved hypothetical protein [Chitinophaga pinensis DSM 2588]
          Length = 300

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 69/231 (29%), Gaps = 35/231 (15%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRALISVQKD 279
           Q + +A    +   +     T      K     I           FS+NG+    +V   
Sbjct: 14  QSLVFAQQPIKRSGKYLGEQTPGMTPVKFAPGLISLPDQHEFGSIFSANGEECYFAVDSK 73

Query: 280 EAMDIYSVDLQSNATER----LTNTLFINISASYSPDSSQIVFESDRE----GK---EQL 328
              +I    L      +    L++ ++       SPD S++ F SDR     GK     +
Sbjct: 74  GKAEIRHTKLVGGQWTKPLTILSDKVYSYNDPMLSPDESKLFFISDRSPDDTGKKKDYDI 133

Query: 329 YVMQSNGSDQKRISQDKEASY-----FDPVWSPQGDLIAFTK------FSGEKFAIGVMK 377
           + ++ NG           A       +   ++  G  + F+            F I    
Sbjct: 134 WYVKRNGDRWSAPINAGPAINSSRHEYYVSFAKNGT-MYFSSNKHADANRTNNFDIYAAL 192

Query: 378 KDGSQERL------LVEDSNLQAPTW-SPSGRSLIFS-RKKDGDTGSKLYS 420
              +  +        +     +A  + +     +IFS    DG     LY 
Sbjct: 193 AAQTGFQQPSRLAETINTGQYEADVFVAADESYIIFSAAHTDGYGAGDLYI 243



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 77/252 (30%), Gaps = 46/252 (18%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSS 267
           DQ  F   FS N ++  Y   D +    +        +  K +      + +   P  S 
Sbjct: 51  DQHEFGSIFSANGEE-CYFAVDSKGKAEIRHTKLVGGQWTKPLTILSDKVYSYNDPMLSP 109

Query: 268 NGKRALISVQKDEA-------MDIYSVDLQSNATE-RLTNTLFINIS-----ASYSPDSS 314
           +  +      +           DI+ V    +     +     IN S      S++ + +
Sbjct: 110 DESKLFFISDRSPDDTGKKKDYDIWYVKRNGDRWSAPINAGPAINSSRHEYYVSFAKNGT 169

Query: 315 QIVFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFDPV-----WSPQGDLIAF 363
            + F S+      R     +Y   +  +  ++ S+  E             +     I F
Sbjct: 170 -MYFSSNKHADANRTNNFDIYAALAAQTGFQQPSRLAETINTGQYEADVFVAADESYIIF 228

Query: 364 TKFSGEKF-----AIGVMKKDGSQER------LLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           +    + +      I   K DGS          +    +   P  +  G+ L ++ ++D 
Sbjct: 229 SAAHTDGYGAGDLYISFRKADGSWSHAKNMGDTINTPGHELCPFVTADGKYLFYTSRQD- 287

Query: 413 DTGSKLYSIDLN 424
                +Y +D  
Sbjct: 288 -----IYWVDAT 294


>gi|254568446|ref|XP_002491333.1| Essential subunit of the COMPASS (Set1C) complex [Pichia pastoris
           GS115]
 gi|238031130|emb|CAY69053.1| Essential subunit of the COMPASS (Set1C) complex [Pichia pastoris
           GS115]
 gi|328352152|emb|CCA38551.1| Uncharacterized WD repeat-containing protein alr3466 [Pichia
           pastoris CBS 7435]
          Length = 317

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 73/201 (36%), Gaps = 20/201 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +F+P    +A  ++ +     + ++D    R  +  G+    +    +S +G+    S  
Sbjct: 24  KFNPEGSLIA-VSFANG---TIQILDQEGHRVKELKGHTLG-VSDLSWSEDGRYLA-SAS 77

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  + I+S++      + L    +      ++   + ++  S     E + V   N S 
Sbjct: 78  DDTTVKIWSIE-SFKCVKTLVGHTYHVNCVKFNHKGNLLISGSS---DEAIRVWDINNSK 133

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAP 395
             +              S  G +I    + G    I +      Q  + L+ +  ++  P
Sbjct: 134 CLKTLCAHSDPISAVDLSWDGTIIVSASYDG---LIRLFDTQSGQCLKTLIYDGGDVSYP 190

Query: 396 T----WSPSGRSLIFSRKKDG 412
                +SP+G+ ++ +   DG
Sbjct: 191 VSYVRFSPNGKYIL-ASTLDG 210



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 73/188 (38%), Gaps = 10/188 (5%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++ ++D++G  ++ L       + +  +S + + +A A+ D      V +      +  K
Sbjct: 40  TIQILDQEGHRVKEL-KGHTLGVSDLSWSEDGRYLASASDDT----TVKIWSIESFKCVK 94

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +      +   +F+  G   LIS   DEA+ ++ ++  S   + L        +   S 
Sbjct: 95  TLVGHTYHVNCVKFNHKGN-LLISGSSDEAIRVWDIN-NSKCLKTLCAHSDPISAVDLSW 152

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY--FDPVWSPQGDLIAFTKFSGE 369
           D + IV  S  +G  +L+  QS    +  I    + SY      +SP G  I  +   G 
Sbjct: 153 DGTIIVSASY-DGLIRLFDTQSGQCLKTLIYDGGDVSYPVSYVRFSPNGKYILASTLDGA 211

Query: 370 KFAIGVMK 377
                 M 
Sbjct: 212 VRLWDYMD 219


>gi|226295099|gb|EEH50519.1| WD40 domain-containing protein [Paracoccidioides brasiliensis Pb18]
          Length = 738

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 69/209 (33%), Gaps = 12/209 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R+  P    I     F+P+ Q++  A+ +   +  ++      +       NF  +  A
Sbjct: 316 LRWSKPPGPVIAEPDAFTPDSQRILCASGNHISVWDLHDESWSAEIEAGDAFNFTLVDFA 375

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESD 321
             FS + +    S   +  + +    L +     + +  F N++   + P +  +     
Sbjct: 376 --FSHD-EVIAFS---EFNVHLTIFSLSTGGQRVIKSPKFANVTGYGFRPVTGHLALLVK 429

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +  + L V +    +                WSP G  +A    +     + V    G 
Sbjct: 430 LDANDTLTVHEPGTYEVIAAVTLNTIDAQGLKWSPDGAWLAVWDSASTVPKVAVYTAGGQ 489

Query: 382 QERLLVEDSNLQA-----PTWSPSGRSLI 405
             R   E +N  +       WSP  R + 
Sbjct: 490 HYRTYSEVANDDSLGVKMIEWSPDSRLMA 518


>gi|119607645|gb|EAW87239.1| eukaryotic translation initiation factor 3, subunit 9 eta, 116kDa,
           isoform CRA_c [Homo sapiens]
          Length = 819

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 289 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 340

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 341 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 386

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 387 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 444

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 445 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 504

Query: 430 LI 431
            +
Sbjct: 505 RV 506



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 64/209 (30%), Gaps = 28/209 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RF----------- 265
            +SP    +A+   +D+DI     +     R   R+ N  +++     +           
Sbjct: 471 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 530

Query: 266 --SSNGKRALISVQKDEAMDIYSVDLQ----SNATERLTNTLFINISASYSPDSSQIVFE 319
             +  G + +++  +   M    V +            T   F     ++ P+ S+  F 
Sbjct: 531 DRTPKGTQGVVTNFEIFRMREKQVPVDVVEMKGKLYFKTIIAF-----AWEPNGSK--FA 583

Query: 320 SDREGKEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                  ++ V      N    + I    +       WSPQG  +          A+  +
Sbjct: 584 VLHGEAPRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFV 643

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                    + E        W P+GR ++
Sbjct: 644 DTSDCTVMNIAEHYMASDVEWDPTGRYVV 672


>gi|157116667|ref|XP_001652825.1| wd-repeat protein [Aedes aegypti]
 gi|108876348|gb|EAT40573.1| wd-repeat protein [Aedes aegypti]
          Length = 351

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/279 (13%), Positives = 79/279 (28%), Gaps = 26/279 (9%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRFSPNQQKVAYAT 230
            F++      + +VS      + + +  G      +       + E  FSP+   +   +
Sbjct: 62  IFSTEFHPEGQHLVSTGFDRQIFLWNVYGECENVGMMSGHSGAVMEVHFSPDGGNLYTCS 121

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D      V + D       +++      + +   +  G   ++S   D  + I+  D +
Sbjct: 122 TDK----IVAVWDVPTCTRIRKLKGHSHFVNSCSGARRGPTLIVSGSDDSTIKIW--DAR 175

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                  T      ++A    D+++ +     +   ++ V      D     +    +  
Sbjct: 176 KKNVLH-TFDNGYQVTAVCFSDTAEQIISGGID--NEIKVWDIRKKDVIYRLRGHTDTIT 232

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQA------PTWSPSGR 402
               SP G  I           I  ++     ER   +                WSP G 
Sbjct: 233 GLSLSPDGSYILSNSMDNT-LRIWDVRPYAPAERCVKVFNGHQHNFEKNLLRCAWSPDGS 291

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNE--TLINTPAYASD 439
            +       G     +Y  D   R     L       +D
Sbjct: 292 KI-----SSGSADRFVYIWDTTSRRILYKLPGHNGSVND 325



 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 65/194 (33%), Gaps = 16/194 (8%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG   +++ + D    N+ +   +  Q+     FS   +++     D+E    + + D 
Sbjct: 161 VSGSDDSTIKIWDARKKNVLHTFDNGYQVTAV-CFSDTAEQIISGGIDNE----IKVWDI 215

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--RLTNTLF 302
           R      R+      I     S +G   L S   D  + I+ V   + A    ++ N   
Sbjct: 216 RKKDVIYRLRGHTDTITGLSLSPDGSYIL-SNSMDNTLRIWDVRPYAPAERCVKVFNGHQ 274

Query: 303 INIS-----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            N        ++SPD S+I   S       +Y+  +              S  D  + P 
Sbjct: 275 HNFEKNLLRCAWSPDGSKI---SSGSADRFVYIWDTTSRRILYKLPGHNGSVNDVDFHPT 331

Query: 358 GDLIAFTKFSGEKF 371
             +I         +
Sbjct: 332 EPVIVSASSDKTLY 345


>gi|62860166|ref|NP_001017343.1| autophagy-related protein 16 [Xenopus (Silurana) tropicalis]
 gi|114152774|sp|Q5I0B9|ATG16_XENTR RecName: Full=Autophagy-related protein 16; AltName:
           Full=APG16-like 1
          Length = 622

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 61/287 (21%), Positives = 105/287 (36%), Gaps = 53/287 (18%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LWDV   K         S A    I     D    
Sbjct: 346 SPGSRLLATG-----GMDR---RVKLWDVIGNKCEAKGSLTGSNAGITSIEF---DSAGS 394

Query: 165 SITGEKGDFNSRILFV-------SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            +     DF SRI  V       + +  SG + ++  ++D    N R ++ S D+ L   
Sbjct: 395 YLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLD----NARIVSGSHDRTLKL- 449

Query: 218 RFSPNQQ---KVAYATYDDEDIL-------------RVYLMDTRIDRAPKRIGNFRSMIL 261
            +    +   K  +A     DI+             ++   D R +   + +   +  I 
Sbjct: 450 -WDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRTECIVREL-ELQGRIT 507

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-----SPDSSQI 316
           A   +    + L S  +D+ + I   DL++NA ++  +       + +     SPD S  
Sbjct: 508 ALDLNPERTQLL-SCSRDDLIKI--TDLRANAVQQTFSAPGFKCGSDWTRVIFSPDGS-- 562

Query: 317 VFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIA 362
            + S    +  LY         +R+ S+   +S     WSP G  + 
Sbjct: 563 -YVSAGSAEGTLYFWNVLTGKVERMFSKQHSSSINAVAWSPSGTHVV 608


>gi|89273966|emb|CAJ82169.1| APG16 autophagy 16-like (S. cerevisiae) [Xenopus (Silurana)
           tropicalis]
          Length = 623

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 61/287 (21%), Positives = 105/287 (36%), Gaps = 53/287 (18%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LWDV   K         S A    I     D    
Sbjct: 347 SPGSRLLATG-----GMDR---RVKLWDVIGNKCEAKGSLTGSNAGITSIEF---DSAGS 395

Query: 165 SITGEKGDFNSRILFV-------SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            +     DF SRI  V       + +  SG + ++  ++D    N R ++ S D+ L   
Sbjct: 396 YLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLD----NARIVSGSHDRTLKL- 450

Query: 218 RFSPNQQ---KVAYATYDDEDIL-------------RVYLMDTRIDRAPKRIGNFRSMIL 261
            +    +   K  +A     DI+             ++   D R +   + +   +  I 
Sbjct: 451 -WDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRTECIVREL-ELQGRIT 508

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-----SPDSSQI 316
           A   +    + L S  +D+ + I   DL++NA ++  +       + +     SPD S  
Sbjct: 509 ALDLNPERTQLL-SCSRDDLIKI--TDLRANAVQQTFSAPGFKCGSDWTRVIFSPDGS-- 563

Query: 317 VFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIA 362
            + S    +  LY         +R+ S+   +S     WSP G  + 
Sbjct: 564 -YVSAGSAEGTLYFWNVLTGKVERMFSKQHSSSINAVAWSPSGTHVV 609


>gi|33239445|ref|NP_003742.2| eukaryotic translation initiation factor 3 subunit B [Homo sapiens]
 gi|83367072|ref|NP_001032360.1| eukaryotic translation initiation factor 3 subunit B [Homo sapiens]
 gi|218512094|sp|P55884|EIF3B_HUMAN RecName: Full=Eukaryotic translation initiation factor 3 subunit B;
           Short=eIF3b; AltName: Full=Eukaryotic translation
           initiation factor 3 subunit 9; AltName: Full=Prt1
           homolog; Short=hPrt1; AltName: Full=eIF-3-eta; AltName:
           Full=eIF3 p110; AltName: Full=eIF3 p116
 gi|51094702|gb|EAL23951.1| eukaryotic translation initiation factor 3, subunit 9 eta, 116kDa
           [Homo sapiens]
 gi|119607643|gb|EAW87237.1| eukaryotic translation initiation factor 3, subunit 9 eta, 116kDa,
           isoform CRA_a [Homo sapiens]
 gi|119607646|gb|EAW87240.1| eukaryotic translation initiation factor 3, subunit 9 eta, 116kDa,
           isoform CRA_a [Homo sapiens]
 gi|119607647|gb|EAW87241.1| eukaryotic translation initiation factor 3, subunit 9 eta, 116kDa,
           isoform CRA_a [Homo sapiens]
          Length = 814

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 289 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 340

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 341 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 386

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 387 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 444

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 445 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 504

Query: 430 LI 431
            +
Sbjct: 505 RV 506



 Score = 43.1 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 471 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 530

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 531 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 583

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      N    + I    +       WSPQG  +          A+  +     
Sbjct: 584 APRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 643

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 644 TVMNIAEHYMASDVEWDPTGRYVV 667


>gi|332864349|ref|XP_003318262.1| PREDICTED: eukaryotic translation initiation factor 3 subunit B
           isoform 1 [Pan troglodytes]
 gi|332864351|ref|XP_003318263.1| PREDICTED: eukaryotic translation initiation factor 3 subunit B
           isoform 2 [Pan troglodytes]
          Length = 814

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 289 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 340

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 341 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 386

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 387 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 444

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 445 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 504

Query: 430 LI 431
            +
Sbjct: 505 RV 506



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 471 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 530

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 531 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 583

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      N    + I    +       WSPQG  +          A+  +     
Sbjct: 584 APRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 643

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 644 TVMNIAEHYMASDVEWDPTGRYVV 667


>gi|328710969|ref|XP_001945555.2| PREDICTED: notchless protein homolog 1-like [Acyrthosiphon pisum]
          Length = 472

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 60/185 (32%), Gaps = 16/185 (8%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P   + +   +FSP+ +K+A  + D      V   D  +          ++ +L   +S
Sbjct: 103 LPGHAEAVISVQFSPDSRKLASGSGDT----TVRFWDLDMQTPLHTCEGHKNWVLCIAWS 158

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-----SPDSSQIVFESD 321
            N K  + S  K+  +  ++V+        +T       +  +     SP+       S 
Sbjct: 159 PNSKYLV-SGCKNGMIMSWNVETGKRVGPPMTGHKQWITALCWAPYHLSPECRIFA-SSS 216

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           ++G   + +        +R       S     W   G  + ++        +     DG 
Sbjct: 217 KDG--DIRIWDIILGQCQRSLTSHTRSITCLKW--GGTGLLYSSSQDRTIKVWRAD-DGI 271

Query: 382 QERLL 386
             R L
Sbjct: 272 LCRTL 276



 Score = 43.1 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 69/157 (43%), Gaps = 19/157 (12%)

Query: 182 ESVVSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E ++SG    +L +   + + N         Q++   +FSP+ + VA A++D      + 
Sbjct: 329 ERLISGSDDFTLFLWAPESSKNSVARMTGHQQLINCVQFSPDTRLVASASFDK----SIK 384

Query: 241 LMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           L D +  +    +G  R  + A    R+S++  R L+S   D  + ++  D+++   +  
Sbjct: 385 LWDGKTGQF---LGTMRGHVQAVYMIRWSAD-SRLLVSGSADSTLKVW--DVKAKKLQGD 438

Query: 298 TNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQS 333
                  + A  +SPD  ++       GK+++  + +
Sbjct: 439 LPGHADEVFAVDWSPDGHKVA----SGGKDKVLRLWT 471



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 53/153 (34%), Gaps = 7/153 (4%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           NG   LIS   D  + +++ +   N+  R+T    +     +SPD+  +   S     + 
Sbjct: 326 NGGERLISGSDDFTLFLWAPESSKNSVARMTGHQQLINCVQFSPDTRLVASASF---DKS 382

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +            +    + +   WS    L+  +  +     +  +K    Q  L  
Sbjct: 383 IKLWDGKTGQFLGTMRGHVQAVYMIRWSADSRLLV-SGSADSTLKVWDVKAKKLQGDLPG 441

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
               + A  WSP G  +        D   +L++
Sbjct: 442 HADEVFAVDWSPDGHKVA---SGGKDKVLRLWT 471



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 62/185 (33%), Gaps = 20/185 (10%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           I R    +      +++ +FS + ++   S   D  +  + +D+Q+             +
Sbjct: 96  ITRCTSSLPGHAEAVISVQFSPDSRKLA-SGSGDTTVRFWDLDMQT-PLHTCEGHKNWVL 153

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA--------SYFDPVWSPQ 357
             ++SP+S  +V      G +   +M  N    KR+               +     SP+
Sbjct: 154 CIAWSPNSKYLV-----SGCKNGMIMSWNVETGKRVGPPMTGHKQWITALCWAPYHLSPE 208

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              I  +        I  +     Q  L     ++    W   G  L++S  +  D   K
Sbjct: 209 -CRIFASSSKDGDIRIWDIILGQCQRSLTSHTRSITCLKWG--GTGLLYSSSQ--DRTIK 263

Query: 418 LYSID 422
           ++  D
Sbjct: 264 VWRAD 268


>gi|296193354|ref|XP_002744483.1| PREDICTED: eukaryotic translation initiation factor 3 subunit B
           isoform 1 [Callithrix jacchus]
          Length = 810

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 285 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 336

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 337 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 382

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 383 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 440

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 441 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 500

Query: 430 LI 431
            +
Sbjct: 501 RV 502



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 467 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 526

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 527 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 579

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      N    + I    +       WSPQG  +          A+  +     
Sbjct: 580 APRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 639

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 640 TVMNIAEHYMASDVEWDPTGRYVV 663


>gi|262281567|ref|ZP_06059346.1| coagulation factor 5/8 type domain-containing protein
           [Acinetobacter calcoaceticus RUH2202]
 gi|262257026|gb|EEY75765.1| coagulation factor 5/8 type domain-containing protein
           [Acinetobacter calcoaceticus RUH2202]
          Length = 319

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 77/220 (35%), Gaps = 27/220 (12%)

Query: 219 FSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRAL 273
           FSP+ + + +          D   VY         P  +    +     P+F  + +R +
Sbjct: 86  FSPDGKWLTFMGVNSGQHYGDAWDVYAWRVGSTELPINLTQGNNKRDEDPKF-LDNQRII 144

Query: 274 ISVQKDEAMDIYSVDLQSNATERLT-NTLFINIS-ASYSPDSSQIVFESDREGKEQLYVM 331
                 +  D+  V +       +T N   I  S      +++QI++        +++ +
Sbjct: 145 F----KQNGDLKIVKMTDRTITSVTQNGWDIEESMPYPMVNTTQILYAKGVSSNSRIFSI 200

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---SGEKFAIGVMKKDGSQERLLVE 388
             +G+   +++    ASY+   W  QG    + ++   +     I V      Q   L  
Sbjct: 201 DQSGAYNTQLTSI--ASYYPVWW--QGSQFLYVRWYNSTNTHDQIYVYDMATKQNTRLPF 256

Query: 389 DS---NLQAPTWSP-SGRSLIFS--RKKDGDTGSKLYSID 422
           +S   N   P  +P   R ++ S   +     G  LY  D
Sbjct: 257 NSTVVNTSDP--APLDQRYMVVSLAGQTGSRGGYDLYIAD 294



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 62/171 (36%), Gaps = 19/171 (11%)

Query: 283 DIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFESDREG-----KEQLYVMQSNG 335
            +Y  +  +  T  L     I+  ++  +SPD   + F     G        +Y  +   
Sbjct: 58  KLYLYNFTTQQTTLLGANWKIDHMMNGHFSPDGKWLTFMGVNSGQHYGDAWDVYAWRVGS 117

Query: 336 SDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           ++    ++Q       DP +      I F         I  M  D +   +     +++ 
Sbjct: 118 TELPINLTQGNNKRDEDPKFL-DNQRIIF--KQNGDLKIVKM-TDRTITSVTQNGWDIEE 173

Query: 395 PTWSP--SGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLINTPAYASDPQW 442
               P  +   ++++  K   + S+++SID +G  N  L +  +Y   P W
Sbjct: 174 SMPYPMVNTTQILYA--KGVSSNSRIFSIDQSGAYNTQLTSIASYY--PVW 220


>gi|158336186|ref|YP_001517360.1| WD repeat-containing protein [Acaryochloris marina MBIC11017]
 gi|158306427|gb|ABW28044.1| WD-repeat protein [Acaryochloris marina MBIC11017]
          Length = 384

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 71/190 (37%), Gaps = 18/190 (9%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           I A  +S  G    ++     A ++  +   S+   +  N L I+  A +S D   +   
Sbjct: 30  ITAIAWSPVGNTLAVTS---GAGEVLLLHNDSDLLLQDANGLSIDDIA-FSADGQWLA-A 84

Query: 320 SDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGV 375
             + G+  L+ M    + +K     +   ++++ D   W P  +L+AF +  G+   I  
Sbjct: 85  GGQAGQINLWPMTIEMATEKAPATKTLTGDSAWIDRLQWHPHHNLLAFNR--GKTVQIW- 141

Query: 376 MKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              D ++    +E  + +Q   WSP G+ L  +      T   ++ I             
Sbjct: 142 -DADRAEMLTTLELAAQVQDIGWSPDGQHLAVAAN----TLVHIWRIPQWDHPLHQWELM 196

Query: 435 AYASDPQWVG 444
           A A    W  
Sbjct: 197 APAMSLSWSP 206


>gi|109065848|ref|XP_001086876.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           B-like [Macaca mulatta]
          Length = 814

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 289 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 340

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 341 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 386

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 387 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 444

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 445 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 504

Query: 430 LI 431
            +
Sbjct: 505 RV 506



 Score = 43.1 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 471 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 530

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 531 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 583

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      N    + I    +       WSPQG  +          A+  +     
Sbjct: 584 APRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 643

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 644 TVMNIAEHYMASDVEWDPTGRYVV 667


>gi|62484877|emb|CAI78894.1| serine/threonine protein kinase [uncultured bacterium]
          Length = 1095

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 65/181 (35%), Gaps = 18/181 (9%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +      A  +S +G   + +V KD  + +Y  +     ++ +           +SP  S
Sbjct: 431 SGHGRQTAVNYSPDGAWLV-TVGKDRRLVVYESN-SGRVSQVIPAERAHAQCVCFSPAGS 488

Query: 315 QIVFESDREGKEQLYVM-QSNGSDQKRISQDKE---ASYFDPVWSPQGDLIAFTKFSGEK 370
           Q V+    +G+ +++   ++ G   +R S   E           SP G  +A    +G  
Sbjct: 489 Q-VYIGGADGRIRMWSFERAAGKIAERPSTVLELEAGPVTRVAASPDGHRLAAGTETGVV 547

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSK------LYSI 421
           +   V   +G   + +     L   T   +S     L  S K  G  G +      ++ +
Sbjct: 548 YVFNVSSANG--LQQIFRQGGLGEVTDLAFSAESERLAASAKGAGANGQERPGGVWIWRL 605

Query: 422 D 422
           D
Sbjct: 606 D 606



 Score = 40.0 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 33/221 (14%), Positives = 68/221 (30%), Gaps = 17/221 (7%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD-DEDILRV 239
            S +    + ++ L + D        +    D+      F+P++Q +A+A         R+
Sbjct: 780  STTEPKLVRRDRLVIYDLGQGEQTTIVAGPDEQFSPAVFAPDRQTIAFARTACTSGTSRL 839

Query: 240  YLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISVQKDEAMDIYSVDLQSN----AT 294
             +++       +R          A  +       L+ V KD ++ ++ V           
Sbjct: 840  AVVNAGSPDVERRSPEVEGKATNAICWLGQDAHCLLDVLKDGSLVVWRVRSAGGANIPEL 899

Query: 295  ERLTNTLFINISASYSPDSSQIVFES---DREGKEQLYVM--------QSNGSDQKRISQ 343
            ER+        S S   D   +V      D  G+ +L+            + + ++    
Sbjct: 900  ERIDGFAHRCTSLSEWADGEWLVASEEGPDAVGRVKLWRATGRSLAEHPFDQAYERYSDF 959

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                  +  V    GD       +G    I +      Q R
Sbjct: 960  PTHGYTWRAVLVKDGDGNLLVATTGSVHEIHLWDAATGQPR 1000


>gi|2558668|gb|AAC99479.1| eukaryotic translation initiation factor [Homo sapiens]
 gi|12654669|gb|AAH01173.1| EIF3B protein [Homo sapiens]
 gi|84570114|gb|AAI10866.1| Eukaryotic translation initiation factor 3, subunit B [Homo
           sapiens]
          Length = 814

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 289 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 340

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 341 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 386

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 387 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 444

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 445 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 504

Query: 430 LI 431
            +
Sbjct: 505 RV 506



 Score = 43.1 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 471 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 530

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 531 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 583

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      N    + I    +       WSPQG  +          A+  +     
Sbjct: 584 APRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 643

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 644 TVMNIAEHYMASDVEWDPTGRYVV 667


>gi|107023260|ref|YP_621587.1| 3-carboxymuconate cyclase-like [Burkholderia cenocepacia AU 1054]
 gi|116690343|ref|YP_835966.1| 3-carboxymuconate cyclase-like protein [Burkholderia cenocepacia
           HI2424]
 gi|170733681|ref|YP_001765628.1| 6-phosphogluconolactonase [Burkholderia cenocepacia MC0-3]
 gi|105893449|gb|ABF76614.1| 3-carboxymuconate cyclase-like protein [Burkholderia cenocepacia AU
           1054]
 gi|116648432|gb|ABK09073.1| 3-carboxymuconate cyclase-like protein [Burkholderia cenocepacia
           HI2424]
 gi|169816923|gb|ACA91506.1| 6-phosphogluconolactonase [Burkholderia cenocepacia MC0-3]
          Length = 415

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 49/345 (14%), Positives = 102/345 (29%), Gaps = 33/345 (9%)

Query: 91  ITNPDSIPRFQDWNSLGAQV---LVTGRVIKEGKDRLRVEFRLWDVKDRKQ-IIGKKFFS 146
           + +  +   F   +S  A     L+ G     G D + V +R +D K      +      
Sbjct: 31  VLSLSATHAFAQQSSAPADGVYNLLVGTYTGGGSDGIYV-YR-FDTKSGSVAPVSSAKTV 88

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRY 205
           +P+         +      + G+ G    R    +          + +  +  +G +  Y
Sbjct: 89  NPSYLLPSRDGRTVYAVNELPGDDGPATQRGGVSAFRFDAKTGALSFIDRVSSEGNDPCY 148

Query: 206 LTPSRDQ-----ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           L  S D        +     P          DD  + +  L        P +     + +
Sbjct: 149 LALSPDGKYLVTANYSVAADPGGSFAVLPLRDDGAVGQAVLTVHHEGTGPVKGRQDGAHV 208

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISA-------SYSPD 312
            +  FS +G+   +     + +  Y   +         T+T +  + A        +S D
Sbjct: 209 HSTVFSPDGRYLFVQDLGADKIYGYRYTVDGSRGLISPTDTRYTPVKAGSGPRHMVFSAD 268

Query: 313 SSQIVFESDREGKEQLY------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
                  S+     +++      +               +        SP G  + +   
Sbjct: 269 GRFAYVTSELNASVEVFGYHDGKLTPIETLPMTAPGFKGKVGGGAIHLSPDGRFL-YASN 327

Query: 367 SGEKFAI---GVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLI 405
            G+   +    V K DG  + +  + S  + P      P+G+ LI
Sbjct: 328 RGDANDLVIYAVNKADGRLKHVGRQSSLGKTPREFLIDPTGKWLI 372



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 69/222 (31%), Gaps = 44/222 (19%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF---SSNGKRALIS---------V 276
            T    D + VY  DT+       + + +++   P +   S +G+               
Sbjct: 59  YTGGGSDGIYVYRFDTKSGS-VAPVSSAKTVN--PSYLLPSRDGRTVYAVNELPGDDGPA 115

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIV-----FESDREGKEQL 328
            +   +  +  D ++ A   +           Y   SPD   +V       +D  G   +
Sbjct: 116 TQRGGVSAFRFDAKTGALSFIDRVSSEGNDPCYLALSPDGKYLVTANYSVAADPGGSFAV 175

Query: 329 YVMQSNGS-DQKRISQDKEAS-----------YFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             ++ +G+  Q  ++   E +               V+SP G  +       +K      
Sbjct: 176 LPLRDDGAVGQAVLTVHHEGTGPVKGRQDGAHVHSTVFSPDGRYLFVQDLGADKIYGYRY 235

Query: 377 KKDGSQERL---------LVEDSNLQAPTWSPSGRSLIFSRK 409
             DGS+  +         +   S  +   +S  GR    + +
Sbjct: 236 TVDGSRGLISPTDTRYTPVKAGSGPRHMVFSADGRFAYVTSE 277


>gi|332637597|ref|ZP_08416460.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Weissella
           cibaria KACC 11862]
          Length = 623

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 64/197 (32%), Gaps = 21/197 (10%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            +   +VY              + + +  AP    +G + + +V   +A    +V     
Sbjct: 67  YQQAGQVYRRTGDGQVTQLTQTSHKIVSFAPT--PDGTKIVFAVLVSDAEAFNTVS-DRP 123

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                T          Y  D    +   D +   ++YV    G  ++ ++ D      D 
Sbjct: 124 QVRHYTKRR-------YKADGGGFI---DEQRHFEVYVATIAGETRRLLTTDLPVQVADT 173

Query: 353 VWSPQGDLIAFTKFSGE---KFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSR 408
             + Q  LIA T        + A+  +  +      L  E + +   T +P GR ++F  
Sbjct: 174 TTT-QALLIAQTTTEDADELRSALRWLDLETGDITPLTTEVAEVHEATIAPDGRQVLFIA 232

Query: 409 KKD---GDTGSKLYSID 422
             D       + LY  D
Sbjct: 233 NDDQYPNRRVASLYRFD 249



 Score = 37.3 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 56/163 (34%), Gaps = 26/163 (15%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--GSDQKRISQD 344
           +DL++     LT  +     A+ +PD  Q++F ++ +      V        +   I+ D
Sbjct: 199 LDLETGDITPLTTEVAEVHEATIAPDGRQVLFIANDDQYPNRRVASLYRFDGEATTIAFD 258

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--------SQERL-----LVEDSN 391
           +E         P  D++       +   +  +  D            R+           
Sbjct: 259 QEELLAG----PNSDIVV----QNQARHVRWLDNDTWLFETGFHGHTRVYQGSATTNQLL 310

Query: 392 LQAPTWSPS---GRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           L  P +      G+  +   ++D    S+L ++DL  +   ++
Sbjct: 311 LDTPQYLQDFAIGKGTVILAQQDTAHPSQLLALDLATKGTQIV 353


>gi|328766448|gb|EGF76502.1| hypothetical protein BATDEDRAFT_36260 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 406

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 61/163 (37%), Gaps = 8/163 (4%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           T  D + +     R  + A       +    S   D+   ++ +D        L      
Sbjct: 59  TFTDDSIQGFFEHREPVYAVALHPIDQTIAASGGGDDRSYLWRMD-TGEKVYNLATHSDS 117

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            I+ S+S D   +      +GK  ++ +  +G  ++ +    E ++ +  W P+G++I  
Sbjct: 118 VIAISFSNDGLYVA-SGGMDGKVFVFRVS-DGHLEQELDGPPEINWLN--WHPKGNVILV 173

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
               G  +   +    G    ++     ++    ++P G+S++
Sbjct: 174 GGDDGSVWMWRI--PSGKCMSVMYGHSGSVTCGQFTPDGKSIV 214



 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/162 (12%), Positives = 46/162 (28%), Gaps = 7/162 (4%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                 R YL           +      ++A  FS++G   L          ++   +  
Sbjct: 90  SGGGDDRSYLWRMDTGEKVYNLATHSDSVIAISFSNDG---LYVASGGMDGKVFVFRVSD 146

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
              E+  +        ++ P  + I+   D      +++ +        +      S   
Sbjct: 147 GHLEQELDGPPEINWLNWHPKGNVILVGGD---DGSVWMWRIPSGKCMSVMYGHSGSVTC 203

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             ++P G  I  T  +     +   K   S  R   +D+   
Sbjct: 204 GQFTPDGKSIV-TGSADGTIIVWDPKTSTSLCRFTGDDARFH 244



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/200 (14%), Positives = 58/200 (29%), Gaps = 13/200 (6%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           T +DD  Q     +    +  L   +     SG   +   +   D     Y   +    +
Sbjct: 59  TFTDDSIQGFFEHREPVYAVALHPIDQTIAASGGGDDRSYLWRMDTGEKVYNLATHSDSV 118

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               FS +   VA    D +    V++         + +     +     +   G   L+
Sbjct: 119 IAISFSNDGLYVASGGMDGK----VFVFRVSDGHLEQELDGPPEINWL-NWHPKGNVILV 173

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               D ++ ++ +         +           ++PD   IV     +G   + V    
Sbjct: 174 GGD-DGSVWMWRIP-SGKCMSVMYGHSGSVTCGQFTPDGKSIV-TGSADGT--IIVWDPK 228

Query: 335 GSDQK-RISQDKEASYFDPV 353
            S    R + D    +  P+
Sbjct: 229 TSTSLCRFTGDDARFHQTPI 248


>gi|256819593|ref|YP_003140872.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Capnocytophaga ochracea DSM 7271]
 gi|256581176|gb|ACU92311.1| peptidase S9B dipeptidylpeptidase IV domain protein [Capnocytophaga
           ochracea DSM 7271]
          Length = 724

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 42/265 (15%), Positives = 79/265 (29%), Gaps = 59/265 (22%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--------------- 263
           FSP    +A+   D+  +    L+D     A  +   +  M   P               
Sbjct: 203 FSPKGNYLAFYQKDESKVADYPLVDITTTPATLKAIKYP-MAGQPSEQAAVGIYDFQSGK 261

Query: 264 -----------------RFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFIN 304
                             +S + +  L++   +      +   D ++       NT+F  
Sbjct: 262 VSYLDINTTDEHFLTNLAWSPDERYILLAEINRAQNHFALNRYDARTGKKV---NTIFEE 318

Query: 305 ISASYSPDSSQIVFE----------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +A +       VF           S+R+G   +Y    NG   K++S  +        +
Sbjct: 319 RNAKWVEPEKPAVFLPNNANEFLWLSERDGFTNVYHYNVNGKLIKQVSNFRWVVQDILGF 378

Query: 355 SPQGDLIAFTKFSGEK------FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS- 407
             QG  + F   +G        F I +      +   L  ++       S  G+ L+ S 
Sbjct: 379 DAQGKYV-FITGTGADPREQHCFKIELKNP--KKVSALTPEAGTHNVQLSSDGKYLLDSY 435

Query: 408 RKKDGDTGSKLYSIDLNGRNETLIN 432
                     L + D  G  + L+ 
Sbjct: 436 SSISVPQNIDLVNTD-KGSRQRLLT 459



 Score = 40.8 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 265 FSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----F 318
           FS  G       QKDE+   D   VD+ +           I    +  P     V    F
Sbjct: 203 FSPKGNYLAF-YQKDESKVADYPLVDITTTPATL----KAIKYPMAGQPSEQAAVGIYDF 257

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVM 376
           +S      ++  +  N +D+  ++        +  WSP    I  A    +   FA+   
Sbjct: 258 QS-----GKVSYLDINTTDEHFLT--------NLAWSPDERYILLAEINRAQNHFALNRY 304

Query: 377 KK-DGSQERLLVEDSNL-----QAPT-WSPSG-RSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               G +   + E+ N      + P  + P+     ++  ++DG T   +Y  ++NG+  
Sbjct: 305 DARTGKKVNTIFEERNAKWVEPEKPAVFLPNNANEFLWLSERDGFT--NVYHYNVNGKLI 362

Query: 429 TLINTPAYA 437
             ++   + 
Sbjct: 363 KQVSNFRWV 371


>gi|224373410|ref|YP_002607782.1| putative curli production assembly/transport component CsgG
           subfamily [Nautilia profundicola AmH]
 gi|223589868|gb|ACM93604.1| putative curli production assembly/transport component CsgG
           subfamily [Nautilia profundicola AmH]
          Length = 443

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 59/187 (31%), Gaps = 38/187 (20%)

Query: 3   LRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSI---D 59
           +R        + I      V       TS     ++       + +++A  K  +     
Sbjct: 1   MRLRRLFAFMVGIFFLSGCVGTTTNVTTSNQNVNEIVKYKGPKARIAVASFKCKAAKCNG 60

Query: 60  ELGGKVSEVVSKDLQRSDVFNLISQDSFK------QKITNPDSIPRFQDWNSL-GAQVLV 112
           ++G  ++++++  L  S  F +I + +        +   +   I + +  N+L GA +LV
Sbjct: 61  QIGSGIADMLTTALFNSGKFIVIERSNEGFSAVERELQLSQGMIKQNRQINNLEGADILV 120

Query: 113 TGRVI---KEGKD-------------------------RLRVEFRLWDVKDRKQIIGKKF 144
            G +     +                             +  + RL DVK  + I     
Sbjct: 121 VGAITAFEPKAGGISAGGIVIPRGVPVIGGIKFGKDEAYIAADIRLIDVKTGRIINATTV 180

Query: 145 FSSPASW 151
               + W
Sbjct: 181 EGQASKW 187


>gi|255931989|ref|XP_002557551.1| Pc12g07160 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582170|emb|CAP80343.1| Pc12g07160 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1602

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 75/268 (27%), Gaps = 34/268 (12%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYL 241
             +G  +  L      G NI         +        FSP+ + + +        +  Y 
Sbjct: 1284 SAGHERLDLWDA-ATGRNIHTYKDHDGWLTNHVSKVIFSPDSRWLVF-----RAGITSYK 1337

Query: 242  MDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL--- 297
             D     +  R      +  L   FS + K     +     + ++SV       E L   
Sbjct: 1338 WDISRGLSGIRPIPSNGVGSLRFAFSPDSKVLAQEISATGHVQLWSV----QTLEPLHAF 1393

Query: 298  TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                 +   A +SPD+          G   +     +     R    +         S  
Sbjct: 1394 PVHKGVGDMA-FSPDNKCFA-CGLVSG--DIRRWDLDTEIPHRTLTHRTGMVIKVALSSD 1449

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              L+A    +  +  I      GS  R    ++ +   ++      L         T  +
Sbjct: 1450 SKLLA--SSTHSEVIIWDW-ATGSALRTFTPETEVTELSFCNEDNFL--------KTDQE 1498

Query: 418  LYSIDLNGRNETLINTP--AYASDPQWV 443
            ++ ++ +         P   ++ D  W+
Sbjct: 1499 VFPVNGSSTAPPPKEFPRFGFSPDGSWI 1526



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 36/233 (15%), Positives = 75/233 (32%), Gaps = 28/233 (12%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FS + + +A  + D+  +++V+   T          +    I A  FS + +    S +
Sbjct: 969  AFSSDGELIA--SGDNSGVVKVWDSKTGQLLHTMARDDDDDEIEAVAFSPDCRLLA-SAK 1025

Query: 278  KDEAMDIYSVDL-QSNATERL------TNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                     V + +S    +L      T  +    + +YS D   +       G   + +
Sbjct: 1026 CGVNFHGGVVQVHESRIGTKLHELEFHTTDISYPRAVAYSRDGKVLAVG---GGNGVITL 1082

Query: 331  MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                  + KR  +    +     +S  G  +  +    +   +     +   E+LL    
Sbjct: 1083 WDLTSGNSKRRLEGHTEAVTAVSFSADG--LLASGSDDKTARLW--NPE--SEQLLRTFE 1136

Query: 391  NLQAPTWSPSGRSLIFSRKKD---GDTGSKLYSIDL-NGRNETLINTPAYASD 439
             L  P W      + F+       G T   + + D+ +G     +  P    D
Sbjct: 1137 GLSNPVW-----MVGFAAHGHLLIGLTNGVVKTWDMQDGGTVETLTAPRRDVD 1184


>gi|171692415|ref|XP_001911132.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946156|emb|CAP72957.1| unnamed protein product [Podospora anserina S mat+]
          Length = 771

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 71/206 (34%), Gaps = 14/206 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     ++ +  +D A+ + +    D  +    + PN   V  A+ + +  +R  +    
Sbjct: 511 TAGWDKTVRIFTQDHASAQRIMVGHDTPISAIAWHPNGTYVFSASDETDKSIR--MWSLT 568

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                +        I A + + NGK  L S      + ++ ++          +      
Sbjct: 569 TGGCVRIYTGHADYISALQCAPNGK-ILASADTGGNIFLWDIEKSKRIKRMRGHGKGGIP 627

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S S+S +S+ ++     +G  +++ ++      K  +         P   P G  +A   
Sbjct: 628 SLSFSAESNILI-SGGLDGTVRVWDVELPADPSK--ANPLAGGSVQPGQQPDGITVASDS 684

Query: 366 F----SGEKFAIGVMKKDGSQERLLV 387
                SG+  +I V    G Q   + 
Sbjct: 685 IAVAGSGDNRSITV----GGQAAQVT 706



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 38/124 (30%), Gaps = 9/124 (7%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + P              + + +   + +  +RI    +       W P G  + F+    
Sbjct: 502 WGPHGHYFA---TAGWDKTVRIFTQDHASAQRIMVGHDTPISAIAWHPNGTYV-FSASDE 557

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
              +I +          +             +P+G+ L  S    G+    L+ I+ + R
Sbjct: 558 TDKSIRMWSLTTGGCVRIYTGHADYISALQCAPNGKILA-SADTGGNIF--LWDIEKSKR 614

Query: 427 NETL 430
            + +
Sbjct: 615 IKRM 618


>gi|150866346|ref|XP_001385912.2| hypothetical protein PICST_62437 [Scheffersomyces stipitis CBS
           6054]
 gi|149387602|gb|ABN67883.2| component of the ARP2-3 complex [Scheffersomyces stipitis CBS 6054]
          Length = 380

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 66/200 (33%), Gaps = 23/200 (11%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +  +    D+ +     SP+  ++   + D   ++  Y       +    +         
Sbjct: 50  LFTVLAGHDKTVTSVDISPDGSRILTCSQDRNALVWEYDGAANEYKPTLVLLRINRAATV 109

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQ-----SNATER--------LTNTLFINISASY 309
            ++S +G++  +    D  + +   + +     S   ++        L+      + AS 
Sbjct: 110 CKWSPDGQKFAVGSS-DRIIAVCYYEAENNWWVSKHLKKPLKSTITCLSWHQNGVLLASG 168

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------QDKEASYFDPVWSPQGDLIAF 363
           S D    VF +  +G ++       GS     +       D  A      +SP G+ +AF
Sbjct: 169 STDGHVRVFSAFIKGLDEKPEPSPWGSKLPFQTLCGDFINDTGAWIHGVAFSPDGNSLAF 228

Query: 364 TKFSGEKFAIGVMKKDGSQE 383
                    IGV+  +G   
Sbjct: 229 ASHDSS---IGVIYPEGEGL 245


>gi|254250501|ref|ZP_04943820.1| hypothetical protein BCPG_05396 [Burkholderia cenocepacia PC184]
 gi|124879635|gb|EAY66991.1| hypothetical protein BCPG_05396 [Burkholderia cenocepacia PC184]
          Length = 382

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 76/231 (32%), Gaps = 36/231 (15%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +  A+Y    +    +    +    ++      M  A R S +G+ A  SV   +A
Sbjct: 136 SGRYLFSASYGGNLLAVNRIGADGVAGDVRQTVKTGPMAHAIRQSPDGRYAFASVLGADA 195

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYS-PD---SSQIVFESDR---------EGKEQL 328
                 D  +            + + +Y  PD       VF S+          +GK  +
Sbjct: 196 WLRLPFDASTGMLT-------DDTTPAYRLPDKSGPRHFVFSSNGRFAYLIDELDGKLHV 248

Query: 329 YVMQSNGSDQKRI---SQDKEASYFDPVW------SPQGDLIAFTKFSGEKFAIGVMKKD 379
             +   G+D + I   S      + D  W      +P G  +  ++ +    A   +   
Sbjct: 249 LALSHGGADARPIQTVSILPPDFHGDKPWGADLHLTPDGRFLYASERTSSTLAGYRVDAT 308

Query: 380 GSQERLLVEDSNLQAPT-WS--PSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +   +   +  Q P  ++  PSG+ L+      G     L    ++G  
Sbjct: 309 SGRLARIGTFATEQQPRGFAIDPSGKYLL----AAGQLSPTLAVYRIDGHT 355


>gi|169765021|ref|XP_001816982.1| saponin hydrolase precursor [Aspergillus oryzae RIB40]
 gi|83764836|dbj|BAE54980.1| unnamed protein product [Aspergillus oryzae]
          Length = 643

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 47/157 (29%), Gaps = 24/157 (15%)

Query: 269 GKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           GK         E   +D+++ DL +    R+T+          SPD    V    R    
Sbjct: 295 GKEVTYIGNPVESCNIDVFAADLTTGKVRRITDHPEYVDPMDVSPDDKWQVILDTRGTGR 354

Query: 327 QLY---------VMQSNGSDQKRISQDKEASYFDPVW--SPQGDLIAFTKFSGEKFAIGV 375
           Q++         ++    +     +++     F   W     GD           +    
Sbjct: 355 QMFMAGMRGIPPIIDLIATTVASSTRNNGPRRFFRPWLLDHDGDR--------GDYYGQQ 406

Query: 376 MKKDGSQERLLVEDSNLQA---PTWSPSGRSLIFSRK 409
           +  DG      + D N  A   P WS  G  + +   
Sbjct: 407 INGDGDGSPGSINDPNWNAGADPKWSHDGTRIAYFEN 443



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 49/152 (32%), Gaps = 9/152 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+   ++V Y     E                +RI +    +     S + K  +I   +
Sbjct: 291 FTGRGKEVTYIGNPVESCNIDVFAADLTTGKVRRITDHPEYVDPMDVSPDDKWQVILDTR 350

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE---SDREGKEQLY---VMQ 332
                ++   ++      + + +   +++S   +  +  F     D +G    Y    + 
Sbjct: 351 GTGRQMFMAGMRG--IPPIIDLIATTVASSTRNNGPRRFFRPWLLDHDGDRGDYYGQQIN 408

Query: 333 SNGSDQKRISQDKEASYF-DPVWSPQGDLIAF 363
            +G        D   +   DP WS  G  IA+
Sbjct: 409 GDGDGSPGSINDPNWNAGADPKWSHDGTRIAY 440


>gi|281201136|gb|EFA75350.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 342

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 90/257 (35%), Gaps = 32/257 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI-DRAPKRIGNFRSMIL 261
           I  L+  +   ++   +SP+ + +A    D    + +++ ++       +++      + 
Sbjct: 6   ISVLSYDQPSKIWNIEWSPDGKLLASCGDD--KTIHIWMEESENKWVVLQKLEAHEKTVR 63

Query: 262 APRFSSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFES 320
              +S +GK    +   D +  I+ V + + N    L    F   S ++      +   S
Sbjct: 64  RIAWSPDGKYLA-AASFDASTSIWEVNNGEFNHISTLEGHSFEVKSVAWDASGQLLATCS 122

Query: 321 DREGKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSP--------------------QGD 359
            R+    ++ M+ +   +   I+           W P                     GD
Sbjct: 123 -RDKSIWIWQMEDDQDFECISINNGHSQDVKCVRWHPSLEILASASYDDTIKMWQDTDGD 181

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW---SPSGRSLIFSRKKDGDTGS 416
                  S  +  I  ++ + S  RL+    +     W   S +GR  + SR +   +  
Sbjct: 182 WECIDTLSAHESTIWDIQFNASGNRLVSCSDDRSVCFWRLDSTTGRWKLLSRLESVHSRP 241

Query: 417 KLYSIDLNGRNETLINT 433
            ++S+D +  N+ L  T
Sbjct: 242 -IFSVDWS-HNQELSPT 256



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/107 (16%), Positives = 46/107 (42%), Gaps = 8/107 (7%)

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNL 392
           ++   +S D+ +  ++  WSP G L+A +    +   I + + +       +L   +  +
Sbjct: 4   NEISVLSYDQPSKIWNIEWSPDGKLLA-SCGDDKTIHIWMEESENKWVVLQKLEAHEKTV 62

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +   WSP G+ L  +     D  + ++ ++ NG    +     ++ +
Sbjct: 63  RRIAWSPDGKYLAAAS---FDASTSIWEVN-NGEFNHISTLEGHSFE 105



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 65/179 (36%), Gaps = 12/179 (6%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISASYSPDSSQIVFESDR 322
           +S +GK    S   D+ + I+  + ++     ++L          ++SPD   +   S  
Sbjct: 22  WSPDGKLLA-SCGDDKTIHIWMEESENKWVVLQKLEAHEKTVRRIAWSPDGKYLAAASF- 79

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +    ++ + +   +     +          W   G L+A        + I  M+ D   
Sbjct: 80  DASTSIWEVNNGEFNHISTLEGHSFEVKSVAWDASGQLLATCSRDKSIW-IWQMEDDQDF 138

Query: 383 ERLLVEDS---NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           E + + +    +++   W PS   L  +   D     K++  D +G  E +    A+ S
Sbjct: 139 ECISINNGHSQDVKCVRWHPSLEILASASYDD---TIKMWQ-DTDGDWECIDTLSAHES 193


>gi|312198572|ref|YP_004018633.1| hypothetical protein FraEuI1c_4773 [Frankia sp. EuI1c]
 gi|311229908|gb|ADP82763.1| WD40 repeat, subgroup [Frankia sp. EuI1c]
          Length = 1574

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 38/197 (19%)

Query: 258  SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-----NTLFIN-ISASYSP 311
                    S +G+R  I       ++++  D+ +    +L             +  ++SP
Sbjct: 1326 GTTTDVTLSPDGRRLAIGT--PGGLELW--DITTRTAPKLIGRQPAAHKSTGLVRVAFSP 1381

Query: 312  DSSQIVFESDREGKEQLYVMQ----SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            DS  +   S+    + L +        G     ++    A      +SP+G ++A     
Sbjct: 1382 DSRWLASTSN---DKVLKIWDVGRGLAGGPTGTLTL--PAGQNAVAFSPKGAIVALGGQD 1436

Query: 368  GEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                 + V      +          Q     +SP GR+L+      G    +++ +    
Sbjct: 1437 NRVRLVDVADPARPRVAGTSTSQAFQVLAIIFSPDGRALV----AGGAEDIRVWDV---- 1488

Query: 426  RNETLINTPAYASDPQW 442
                    PA   DP+W
Sbjct: 1489 ------TNPA---DPRW 1496



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 24/190 (12%)

Query: 204  RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
            R     +   L    FSP+ + +A  + D   +L+++ +   +   P       +   A 
Sbjct: 1364 RQPAAHKSTGLVRVAFSPDSRWLASTSND--KVLKIWDVGRGLAGGPTGTLTLPAGQNAV 1421

Query: 264  RFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISASYSPDSSQIVFE 319
             FS  G    I     +   +  VD+   A  R+    T+  F  ++  +SPD   +V  
Sbjct: 1422 AFSPKG---AIVALGGQDNRVRLVDVADPARPRVAGTSTSQAFQVLAIIFSPDGRALV-- 1476

Query: 320  SDREGKEQLYVMQSNGSDQKRIS------QDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                G E + V         R +      +     +    +   G  +      G  +A+
Sbjct: 1477 --AGGAEDIRVWDVTNPADPRWTLSLPAIRGLNYPFTFASFLGGGRYLVV----GRNYAV 1530

Query: 374  G-VMKKDGSQ 382
              +   D  Q
Sbjct: 1531 ASLYDLDIGQ 1540



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 26/214 (12%), Positives = 64/214 (29%), Gaps = 25/214 (11%)

Query: 225  KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            ++A A     D               + +      I    +S NG+    S   D  + +
Sbjct: 852  QLAIAADRTADTPDAKTAILGASSPVRLLHAHDGSIGTVAWSPNGRVVA-SGSDDGMVKL 910

Query: 285  Y------SVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSN 334
            +      +V        +       +  A    ++      +       G  ++Y + + 
Sbjct: 911  WDVTHLPAVRPLGGELRQ---GDAKSTHAVKSVTFDDTGRLLA-VGTANGDVKIYTVTNP 966

Query: 335  GSDQKRISQDK----EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             +   R +           F   +   GD++A   + G    +  +   G+   L   + 
Sbjct: 967  AAPVLRDTLPTAPLDGGGVFALAFGAHGDVLAVGGYGGSAVRLYDVGVPGAPRLLSTLNG 1026

Query: 391  NLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + +      ++P G  L+   +   D  + L+ +
Sbjct: 1027 SAEQVRALAFNPDGTLLVTGSE---DGYAYLWDV 1057



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 74/238 (31%), Gaps = 41/238 (17%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYD--DEDILRVYLMDTRIDRAPKRIGNFRS-- 258
               L  + D  +    +SPN + VA  + D   +     +L   R      R G+ +S  
Sbjct: 876  PVRLLHAHDGSIGTVAWSPNGRVVASGSDDGMVKLWDVTHLPAVRPLGGELRQGDAKSTH 935

Query: 259  MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI---NISASYSPDSS- 314
             + +  F   G+   +    +  + IY+V          TN       +   +   D   
Sbjct: 936  AVKSVTFDDTGRLLAV-GTANGDVKIYTV----------TNPAAPVLRDTLPTAPLDGGG 984

Query: 315  --QIVFESDRE-------GKEQLYVMQSNGSDQKRISQDKEAS---YFDPVWSPQGDLIA 362
               + F +  +       G   + +         R+      S        ++P G L+ 
Sbjct: 985  VFALAFGAHGDVLAVGGYGGSAVRLYDVGVPGAPRLLSTLNGSAEQVRALAFNPDGTLLV 1044

Query: 363  FTKFSGEKFAIGVMKKDGSQERLLV---------EDSNLQAPTWSPSGRSLIFSRKKD 411
                 G  +   V     S  +L             S+++A  +SP+GR L      D
Sbjct: 1045 TGSEDGYAYLWDVTDAA-SPLQLQTLATPPAATAATSDIRAVAFSPTGRELAVGTSYD 1101


>gi|269973836|emb|CBE66804.1| CG3004-PA [Drosophila ananassae]
          Length = 312

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 11/151 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    S+ + D        + P  D  + +   SP+ + +A    +++    ++ + +  
Sbjct: 139 GSQNGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA--AANNKGNCYIWSLTSSP 196

Query: 247 D------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           D      R  K+I      IL  +FS +  R L++   D    I++ +        L   
Sbjct: 197 DQKMSTLRPTKKIPAHSRYILRCKFSPD-SRLLLTTSGDGTACIWTTE-DFTKWRELCIE 254

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVM 331
                 A++S DS  + F +  +G  +L+ +
Sbjct: 255 NCWVWDAAFSADSKWL-FTASSDGVARLWKL 284



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 49/132 (37%), Gaps = 16/132 (12%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-------MK 377
              +++        +RI  + +AS  D   SP G  +A     G  +   +       M 
Sbjct: 142 NGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSSPDQKMS 201

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------I 431
                +++      +    +SP  R L+ +    GD  + +++ +   +   L      +
Sbjct: 202 TLRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIWTTEDFTKWRELCIENCWV 258

Query: 432 NTPAYASDPQWV 443
              A+++D +W+
Sbjct: 259 WDAAFSADSKWL 270



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 52/144 (36%), Gaps = 12/144 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------ 291
            V+L D + ++  + +    + I     S +G+    +        I+S+          
Sbjct: 144 SVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA-AANNKGNCYIWSLTSSPDQKMST 202

Query: 292 -NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              T+++       +   +SPDS  ++  S  +G   ++  + + +  + +  +    + 
Sbjct: 203 LRPTKKIPAHSRYILRCKFSPDSRLLLTTSG-DGTACIWTTE-DFTKWRELCIENCWVW- 259

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIG 374
           D  +S     + FT  S     + 
Sbjct: 260 DAAFSADSKWL-FTASSDGVARLW 282


>gi|195163934|ref|XP_002022804.1| GL14550 [Drosophila persimilis]
 gi|194104827|gb|EDW26870.1| GL14550 [Drosophila persimilis]
          Length = 472

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 65/203 (32%), Gaps = 30/203 (14%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR---------FSPNQQK 225
           SRI F             L ++D    N+  +       L+             SP+   
Sbjct: 157 SRIPFKVLDAPELQDDFYLNLVDWSSQNVLAVGLGSCVYLWSACTSQVTRLCDLSPDSNT 216

Query: 226 VAYATYDDE--------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           V   ++++             V + D   ++   ++    + + A  ++S+    L S  
Sbjct: 217 VTSVSWNERGNTVAVGTHHGYVTVWDVAANKQINKLNGHSARVGALAWNSD---ILSSGS 273

Query: 278 KDEAMDIYSVDLQS---NATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQS 333
           +D    I   D ++    +  RL           +SPD+  +       G   +LYV   
Sbjct: 274 RD--RWIIQRDTRTPQLQSERRLAGHRQEVCGLKWSPDNQYLA----SGGNDNRLYVWNQ 327

Query: 334 NGSDQKRISQDKEASYFDPVWSP 356
           +     +   +  A+     WSP
Sbjct: 328 HSVSPVQSYTEHMAAVKAIAWSP 350


>gi|187607147|ref|NP_001120198.1| WD repeat and SOCS box containing 2 [Xenopus (Silurana) tropicalis]
 gi|166796440|gb|AAI59320.1| LOC100145242 protein [Xenopus (Silurana) tropicalis]
          Length = 409

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 70/198 (35%), Gaps = 19/198 (9%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V + D         +   + ++    FS+N    L++  +D+ + I+ +         L+
Sbjct: 137 VKVWDVHTGCLLFNLAGHQDVVRDVSFSTNQSLILVTASRDKTLRIWDLKKDGKLLHVLS 196

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                    + SPD S +       G+  + +         R  +  + S     +SP  
Sbjct: 197 GHTNWVYCCAISPDCSMLC---SAAGENSVLLWSMRSYTLIRKLEGHQNSVVSCDFSPDS 253

Query: 359 ----------DLIAFTKFSGEKFAIGVM---KKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                      +I +  ++GE+    +      D        + S+L++  +SP G   +
Sbjct: 254 ALLVTASYDTTVIMWDPYTGERLREFLHVSLPPDLEYSTTEPQLSSLRSVCFSPEG---L 310

Query: 406 FSRKKDGDTGSKLYSIDL 423
           +      D   +L+S++L
Sbjct: 311 YLASLADDRFLRLWSLEL 328


>gi|53729352|ref|NP_005103.2| WD repeat-containing protein 1 isoform 2 [Homo sapiens]
 gi|20988575|gb|AAH30541.1| WD repeat domain 1 [Homo sapiens]
          Length = 466

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 11/86 (12%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWS 398
           D         +SP G+  A     G    I +      ++          D  + A +WS
Sbjct: 47  DHSRFVNCVRFSPDGNRFATASADG---QIYIYDGKTGEKVCALGGSKAHDGGIYAISWS 103

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLN 424
           P    L+      GD  SK++ + +N
Sbjct: 104 PDSTHLL---SASGDKTSKIWDVSVN 126



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRALI 274
           RFSP+  + A A+ D     ++Y+ D +       +G  +     I A  +S +    L 
Sbjct: 56  RFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLL- 110

Query: 275 SVQKDEAMDIYSVDLQS 291
           S   D+   I+ V + S
Sbjct: 111 SASGDKTSKIWDVSVNS 127


>gi|56414112|ref|YP_151187.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197363034|ref|YP_002142671.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|60389360|sp|Q5PG56|6PGL_SALPA RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|226706812|sp|B5BC39|6PGL_SALPK RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|56128369|gb|AAV77875.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197094511|emb|CAR60031.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 331

 Score = 45.8 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 72/235 (30%), Gaps = 18/235 (7%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 2   KQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 61

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPD-SSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
            Y +     A         +  S +  S D   + VF  S   G   + V +        
Sbjct: 62  AYRIAPDDGALT-FAAESALPGSPTHISTDHHGRFVFVGSYNAGN--VSVTRLQDGLPVE 118

Query: 341 ISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNL 392
           +    E          +P    +       E+  +  +  DG        E   VE +  
Sbjct: 119 LVDVVEGLDGCHSANITPDNRTLWVPALKQERICLFTLSDDGHLVAQEPAEVNTVEGAGP 178

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
           +   + P+ R   +   +   +       + +G  E   TL   PA  SD +W  
Sbjct: 179 RHMVFHPN-RQYAYCVNELNSSVDVWQLKNPHGEIECVQTLDMMPADFSDTRWAA 232


>gi|312129267|ref|YP_003996607.1| dipeptidyl-peptidase iv [Leadbetterella byssophila DSM 17132]
 gi|311905813|gb|ADQ16254.1| Dipeptidyl-peptidase IV [Leadbetterella byssophila DSM 17132]
          Length = 818

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 12/126 (9%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
             ASYSPD+ +I F         LY M     + K I  + +++  +   +  G  + + 
Sbjct: 172 TWASYSPDTMKIFFAK----NYNLYWMDRANFE-KAIKDENDSTIVEHQITKDG--VQYY 224

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            + G++++       G  E+   +  N+   +WSP  +  + +RK +          ++ 
Sbjct: 225 AWGGDQYS----TTTGGDEKEESKRKNVWI-SWSPDAKYFVLTRKDNRHLNPMWVINNVG 279

Query: 425 GRNETL 430
           G+  TL
Sbjct: 280 GKRPTL 285



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 63/172 (36%), Gaps = 18/172 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKRALI 274
           +  ++++  Y +    D+ R+ ++   +D + + + + RS +      P F +N  + + 
Sbjct: 347 WLGDEKE-FYISRSSRDLKRIDIVAVGVDGSVRNVVSERSNVYLDIKKPYFVNNNTQFIH 405

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFI--NISASYSPDSSQIVFESD--REGKEQLYV 330
             Q+D     Y          +LT   +   +++  Y P +    F ++    G++  Y+
Sbjct: 406 WSQRDGWGHFYLYQKDGTLIRQLTQGDYNTEDVTG-YDPKTQTYTFTANGKETGEDPYYL 464

Query: 331 MQSN----GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                   G + K +  +K       + S  G    F   S     I +   
Sbjct: 465 HHYAQSLLGGEPKLL--NKGNFDHQIMTSESGKY--FVNNSSRVNTIPISDL 512


>gi|317154338|ref|YP_004122386.1| hypothetical protein Daes_2644 [Desulfovibrio aespoeensis Aspo-2]
 gi|316944589|gb|ADU63640.1| hypothetical protein Daes_2644 [Desulfovibrio aespoeensis Aspo-2]
          Length = 419

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 77/213 (36%), Gaps = 36/213 (16%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           L+  R+SP+ +  A    D E  L +           +  G+F       +F+ +G    
Sbjct: 68  LWFLRYSPDGRLTALCQQDMEWSLAI---------DGEPWGDFAEYAWETKFTPDGSSIA 118

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFE--------SDREG 324
              + D   + Y V L         +T F N +  S SP  +             +D EG
Sbjct: 119 TMTKND---NRYCVSLNGTPW----DTYFENANQYSLSPCGTHTAAVVQVVSLAQADIEG 171

Query: 325 KEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-FTKFSGEKFAIGVMKKDGSQ 382
             + +Y +  +G+    +      + F P +SP G  +A   + +   + I V   D   
Sbjct: 172 FMKGVYSVAVDGN----VWDGHYVNLFTPTFSPDGARVAAQARITTFDYTIAV---DDKP 224

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
            +   +   +  P + P G +++   +  G  G
Sbjct: 225 WQKTFQQ--VWEPAFHPKGSNVVAPVRTGGKWG 255



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 66/204 (32%), Gaps = 34/204 (16%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           +   EP  SP+ + +A      +    V   +   +   +++          R+S +G+ 
Sbjct: 27  EWQEEPYVSPDGETLAAIVKVGDGEFSVRTNNEVWETPFEKLWFL-------RYSPDGRL 79

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +  Q       +S+ +     E   +         ++PD S I         +  Y +
Sbjct: 80  TALCQQ----DMEWSLAIDG---EPWGDFAEYAWETKFTPDGSSIA---TMTKNDNRYCV 129

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG--SQERLLVED 389
             NG+     +  + A+ +    SP G   A         ++     +G       +  D
Sbjct: 130 SLNGTPWD--TYFENANQY--SLSPCGTHTAAVVQ---VVSLAQADIEGFMKGVYSVAVD 182

Query: 390 SNLQA--------PTWSPSGRSLI 405
            N+          PT+SP G  + 
Sbjct: 183 GNVWDGHYVNLFTPTFSPDGARVA 206


>gi|118472369|ref|YP_890591.1| senescence marker protein-30 [Mycobacterium smegmatis str. MC2 155]
 gi|118173656|gb|ABK74552.1| senescence marker protein-30 [Mycobacterium smegmatis str. MC2 155]
          Length = 300

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 40/125 (32%), Gaps = 7/125 (5%)

Query: 222 NQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + +  + + D  E+     L     D   + +    ++   P +S +G+          
Sbjct: 115 KRGRFVFGSMDTLEESRSGKLYSYGPDGTLQILDEDITVSNGPCWSPDGRTLYFCDTWTG 174

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            +  Y  DL +           ++ S   + D + +    D EG   L+     G    R
Sbjct: 175 EIWCYDYDLDTGKVSNRRTFARVDTSGGGAADGATV----DAEGY--LWQALVYGGKIIR 228

Query: 341 ISQDK 345
            + D 
Sbjct: 229 YAPDG 233



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 58/200 (29%), Gaps = 35/200 (17%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-----SASYSPDSSQI 316
            P + +  +        D  +   + D         T     ++     S +   D +  
Sbjct: 24  GPLWDTEQQLLYWLDSADGRIFRATADG--------TQIRAWDVREKIGSMTLYRDGT-A 74

Query: 317 VFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLI---AFTKFSGE 369
              +   G   LY +     +Q  +             D     +G  +     T     
Sbjct: 75  ALTALENG---LYRVDFETGEQTEVLELERDLPSNRLNDGKVDKRGRFVFGSMDTLEESR 131

Query: 370 KFAIGVMKKDGSQERLLVEDSNL-QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN- 427
              +     DG+  ++L ED  +   P WSP GR+L F     G+     Y  DL+    
Sbjct: 132 SGKLYSYGPDGT-LQILDEDITVSNGPCWSPDGRTLYFCDTWTGEIWC--YDYDLDTGKV 188

Query: 428 ------ETLINTPAYASDPQ 441
                   +  +   A+D  
Sbjct: 189 SNRRTFARVDTSGGGAADGA 208


>gi|47216472|emb|CAG02123.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 640

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 56/309 (18%), Positives = 105/309 (33%), Gaps = 54/309 (17%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   +         S A    I     D    
Sbjct: 365 SPGSRLLATG-----GMDR---RVKLWEVIAGRCEPKGALTGSNAGITSIDF---DSAGS 413

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   RF  +  
Sbjct: 414 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSARFLLDNA 455

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   +YD      + L D R     K +    S           ++ ++S   D+ +  
Sbjct: 456 RIVSGSYDR----TLKLWDLRSKVCMKTVFAGSSCNDIVC----TEQCVMSGHFDKKVRF 507

Query: 285 YSVDLQS--NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
           + +  +S     E L     ++++     D ++++  S     + + V+    +  +   
Sbjct: 508 WDIRAESIVRELELLGRVTSLDLNH----DRTELLSCSR---DDLVKVIDLRTNAVRHTF 560

Query: 343 QDKE----ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPT 396
             +     A +    +SP G  +A     G  +   V    G  +R L    +S + + +
Sbjct: 561 SAQGFKCGADWTRVTFSPDGAYVAGGSADGALYVWNV--LTGKVDRTLDRNHNSAINSVS 618

Query: 397 WSPSGRSLI 405
           WSPSG  + 
Sbjct: 619 WSPSGTYVA 627


>gi|323450628|gb|EGB06508.1| hypothetical protein AURANDRAFT_4253 [Aureococcus anophagefferens]
          Length = 265

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 72/203 (35%), Gaps = 27/203 (13%)

Query: 218 RFSPNQQKVAYATYD---------DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             S + + +A  + D           D++RV     +     +R G F +++ A  FS +
Sbjct: 10  ACSNDGKLLASGSEDGTARVWDATTGDLVRVLEGHGKRTGFQQR-GGFGALVSAVAFSPD 68

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           G     +  +D  + ++  DL +   + +L        S  ++ D  ++V        ++
Sbjct: 69  GASLA-TGCRDNLVRVF--DLATGKIQLQLKGHTAYVSSVEFNVDGGRLV----SGSYDE 121

Query: 328 LYVMQSNGSDQKRIS----QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             V+ +  + +KR++    +  EA+     +   G  +A                    +
Sbjct: 122 TAVVWNAVTGKKRMALLDKKGHEAAVLCAKFFVDGRRVATASQDKSA---RTWDAKTGDQ 178

Query: 384 --RLLVEDSNLQAPTWSPSGRSL 404
              LL    ++ A      GR +
Sbjct: 179 LAVLLGHTHHITAVACLADGRLV 201


>gi|302675861|ref|XP_003027614.1| hypothetical protein SCHCODRAFT_70707 [Schizophyllum commune H4-8]
 gi|300101301|gb|EFI92711.1| hypothetical protein SCHCODRAFT_70707 [Schizophyllum commune H4-8]
          Length = 1262

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 9/117 (7%), Positives = 37/117 (31%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +++    D +++           +Y+    + +  ++  +    +    +         
Sbjct: 317 EQFIWRGNDTLIYSKNVVNTGGTFSYSNDVFKGVYSIFARNLTSSKTETLVDAAPGGASR 376

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           P  S + +      +  +   +   DL++ +   +   L  + +   +P  +   F 
Sbjct: 377 PELSRDQRTLAFVRRVRDKQALVLKDLETGSIHNIWYGLSYDDTRVSAPMGTYPSFA 433



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 48/133 (36%), Gaps = 12/133 (9%)

Query: 304 NISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP----QG 358
           +    +SP    +VF SD   G E ++V   +G +   +                     
Sbjct: 149 DSDPHFSPGGKSLVFRSDAGLGVENIWVKPWDGCEAADLRPAVPHGALAQALDAQDKEDS 208

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSGRSLI----FSRKKDG 412
            L+     + E+ A  ++++   + + +  ++        + PSG+ +I    F+  +  
Sbjct: 209 LLVKGFAETSERMANRLLREGRPEAQRVTNETFRWVSDARFHPSGKKVIATKWFTSSRSI 268

Query: 413 DTGSKLYSIDLNG 425
             G   +  D+ G
Sbjct: 269 PAGEG-WEFDVPG 280


>gi|291402214|ref|XP_002717439.1| PREDICTED: PCAF associated factor 65 beta [Oryctolagus cuniculus]
          Length = 589

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/235 (11%), Positives = 66/235 (28%), Gaps = 22/235 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDM----TIRYWDLGSFTNTVLYQGHAYPVWDLDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+      ++    + P+S+ +   S   
Sbjct: 393 SP--YSLYFASGSHDRTARLWSFDR--TYPLRIYAGHLADVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL----YSIDLNGRNETLIN 432
              L     N+ + T+SP    +  +   +      +     S   +G +  L+ 
Sbjct: 503 FKELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSTPADGSSSELVG 557



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 438 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ----RLK 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 494 LWDLASGTLFKELRGHTDNITSLTFSPDSGLIA-SASMDNSVRVWDI 539


>gi|262381958|ref|ZP_06075096.1| predicted protein [Bacteroides sp. 2_1_33B]
 gi|262297135|gb|EEY85065.1| predicted protein [Bacteroides sp. 2_1_33B]
          Length = 425

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 58/174 (33%), Gaps = 16/174 (9%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED 235
             L+         ++    +M  D  + R +T    +      ++   Q +A    +   
Sbjct: 249 SFLYRKIPTDGDYMRRHTKIMIYDLRDRRLITLPTQESGSHYVWNNRNQLIASCIINGNS 308

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNAT 294
              +Y M   +D     +G+  +      F S+      +   K     IY  D+ + + 
Sbjct: 309 CHVLYDMK-DVDHYQIIVGDVLNSDGHQSFISDTSFVADTYPDKYRMAKIYKADINTQSA 367

Query: 295 ERLTN--------------TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           + L +               +  ++    SP    + F+S R GK  LY+M  +
Sbjct: 368 DLLLSIYSPKEFQTKDFKCHIACDLHPRVSPSGKYLCFDSPRTGKRGLYIMPLS 421


>gi|171909518|ref|ZP_02924988.1| probable vegetatible incompatibility protein HET-E-1
           [Verrucomicrobium spinosum DSM 4136]
          Length = 437

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 53/165 (32%), Gaps = 8/165 (4%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +A A         + +++    R  KR+   +  +LA  FS +G         +  
Sbjct: 185 SGRLLAVAGGSPGRGGELLVVERASGRVVKRLPGSKDTVLAVGFSPDGSLLAAGGTDNTV 244

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKR 340
              Y+ D       +         S +++PD   +V  S DR  K    V+ S       
Sbjct: 245 RVYYTSDW--TPAWKAEAHADWVTSLTFAPDGKHVVSTSRDRTAK----VLASEDGSPGL 298

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKDGSQER 384
              +  ++    V+   G  +  +   GE          DG    
Sbjct: 299 TFANHGSAVTSAVFDADGATVTTSAADGEVRRWKWDESVDGGGRT 343



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 88/266 (33%), Gaps = 23/266 (8%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           L        G     L V    G  ++ L  S+D +L    FSP+   +A      ++ +
Sbjct: 188 LLAVAGGSPGRGGELLVVERASGRVVKRLPGSKDTVLAV-GFSPDGSLLA--AGGTDNTV 244

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           RVY   T       +       + +  F+ +GK  ++S  +D    + + +  S      
Sbjct: 245 RVY--YTSDWTPAWKAEAHADWVTSLTFAPDGKH-VVSTSRDRTAKVLASEDGSPGLT-F 300

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ--SNGSDQK--RISQDKEASYFDPV 353
            N      SA +  D +  V  S  +G+ + +      +G  +   ++ +         V
Sbjct: 301 ANHGSAVTSAVFDADGAT-VTTSAADGEVRRWKWDESVDGGGRTKDKLLKGGRQEVTRVV 359

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                 + A       ++ +  +     +   L    +   P         + +  +DG 
Sbjct: 360 LGSGKIITASVDGRLRQYDLAKLDAPAVELTPLGVRIDALTPD---DSGWKLLAAGQDGR 416

Query: 414 TGSKLYSIDLNGRNETL---INTPAY 436
               L  +DL G  + L   I  P +
Sbjct: 417 ----LQILDL-GAGQRLLSAIAAPGW 437


>gi|168704951|ref|ZP_02737228.1| WD-repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 375

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 73/200 (36%), Gaps = 44/200 (22%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
              + ++IG+   ++  +   +A  + D +++++  ++  F   ++ V E  V+      
Sbjct: 215 TFSQLEVIGRTQENAATALAGVAARL-DALHETLRDQELPFADEVVDVPEPSVADRF--- 270

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
                            R+Q       SP+  +V   +  D  +    L D R  +  +R
Sbjct: 271 -----------------REQTNGVVAASPDGTRVLGGSKYDGKLR---LFDARTGKELRR 310

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +      ++   FS +G +  +S   D ++ ++ V   +    R           ++ P 
Sbjct: 311 LAGHTGWVVCVAFSPDGAK-ALSGGADGSVKMWEV--ATGKLVR-----------AWPPK 356

Query: 313 -SSQIV---FESDREGKEQL 328
             +      F +D  G+ +L
Sbjct: 357 RGAPPAAIGFTAD--GRPRL 374


>gi|114593201|ref|XP_001157908.1| PREDICTED: WD repeat-containing protein 1 isoform 1 [Pan
           troglodytes]
 gi|114593203|ref|XP_001158241.1| PREDICTED: WD repeat-containing protein 1 isoform 3 [Pan
           troglodytes]
          Length = 466

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 11/86 (12%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWS 398
           D         +SP G+  A     G    I +      ++          D  + A +WS
Sbjct: 47  DHSRFVNCVRFSPDGNRFATASADG---QIYIYDGKTGEKVCALGGSKAHDGGIYAISWS 103

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLN 424
           P    L+      GD  SK++ + +N
Sbjct: 104 PDSTHLL---SASGDKTSKIWDVSVN 126



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRALI 274
           RFSP+  + A A+ D     ++Y+ D +       +G  +     I A  +S +    L 
Sbjct: 56  RFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLL- 110

Query: 275 SVQKDEAMDIYSVDLQS 291
           S   D+   I+ V + S
Sbjct: 111 SASGDKTSKIWDVSVNS 127


>gi|222056428|ref|YP_002538790.1| hypothetical protein Geob_3346 [Geobacter sp. FRC-32]
 gi|221565717|gb|ACM21689.1| conserved hypothetical protein [Geobacter sp. FRC-32]
          Length = 430

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 49/168 (29%), Gaps = 15/168 (8%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           AS R     + D +       +  F   +     ++ +G +   + V   +G N      
Sbjct: 260 ASQRGETFLVVDGVKHKTDNLQSVFELVVSSTGNTIHTGFLGGKV-VSFLNGKNTGNTYD 318

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           S    +  P FS N     Y          V              G     ++ P+F  N
Sbjct: 319 S----INFPSFSRNGSNFVYGAAIGPKNFIVVNGAN---------GPAFDKVVTPQFIPN 365

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           G   +   +KD        DLQ +    L +   +       PD   +
Sbjct: 366 GNHVVYRTRKDGERFAVVADLQGHTVRELPHYDGV-WDIQVFPDGKTV 412



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 76/218 (34%), Gaps = 33/218 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  KVAYA   +     V      I         F   +  P FS +G       +K
Sbjct: 51  FSDDGNKVAYAVKSNGKEAMVINDKMGI---------FYEHVRGPAFSPSGSECAYIARK 101

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
               ++  VD +   +    N L       YS     I   S  +G + L  M S+G + 
Sbjct: 102 GG-KELVVVDGKEGKSYDTINHLA------YSRSGRVIY--SATQGDQSL--MVSDGKEI 150

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW- 397
           +        S    + SP    +AF        A+ +  +   + +  V D N  + ++ 
Sbjct: 151 EP--FKGTISDTFLLSSP--KKVAFVAEQKGS-ALHICSE---KLKSCVTDRNYDSISFV 202

Query: 398 SPSG--RSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           +       L +S   +G   S +  +DL+G     + T
Sbjct: 203 NLDELQTHLAYSATLNGQ--SAVIMLDLDGSAPKPVET 238



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 64/205 (31%), Gaps = 44/205 (21%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQL 328
                S   +    +  +DL  +A + +    +  I A   S +   + F + + G+  L
Sbjct: 209 THLAYSATLNGQSAVIMLDLDGSAPKPVETEWYDQIFALDLSENGKHLAFLASQRGETFL 268

Query: 329 YV--MQSNGSDQKRI-----------------------------SQDKEASYFDPVWSPQ 357
            V  ++    + + +                             + +   S   P +S  
Sbjct: 269 VVDGVKHKTDNLQSVFELVVSSTGNTIHTGFLGGKVVSFLNGKNTGNTYDSINFPSFSRN 328

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G    +    G K  I V   +G     +V       P + P+G  +++  +KDG+  + 
Sbjct: 329 GSNFVYGAAIGPKNFIVVNGANGPAFDKVVT------PQFIPNGNHVVYRTRKDGERFA- 381

Query: 418 LYSIDLNGRNETLINTPAYASDPQW 442
               DL G     +       D  W
Sbjct: 382 -VVADLQGHTVRELPH----YDGVW 401



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 41/237 (17%), Positives = 78/237 (32%), Gaps = 29/237 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             ++++ ++D DG+  + +       +F    S N + +A+      +   V        
Sbjct: 218 NGQSAVIMLDLDGSAPKPVETEWYDQIFALDLSENGKHLAFLASQRGETFLVV------- 270

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFINIS 306
              K   +    +     SS G            +    V  L    T        IN  
Sbjct: 271 DGVKHKTDNLQSVFELVVSSTGNTI-----HTGFLGGKVVSFLNGKNTGN--TYDSIN-F 322

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-TK 365
            S+S + S  V+ +    K  + V  +NG                P + P G+ + + T+
Sbjct: 323 PSFSRNGSNFVYGAAIGPKNFIVVNGANG--------PAFDKVVTPQFIPNGNHVVYRTR 374

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             GE+FA+ V    G   R L     +      P G+++ +  K         + +D
Sbjct: 375 KDGERFAV-VADLQGHTVRELPHYDGVWDIQVFPDGKTVGYGAKVGRTL---WWKVD 427


>gi|116624966|ref|YP_827122.1| hypothetical protein Acid_5896 [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228128|gb|ABJ86837.1| hypothetical protein Acid_5896 [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 651

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 46/147 (31%), Gaps = 2/147 (1%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                  + Y +        +  +     +  + + D   I FE   +G+     +    
Sbjct: 501 TSSGAGREGYVLRRLYGGRLQTFDFGGNELRPAAAGDGCGIEFEHVAQGRSTFLRLDPLT 560

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQA 394
           S  +  +   E +  + V SP G      + +     + +      + + L   + N  +
Sbjct: 561 SRTEATAPPAEINPGNGVVSPDGRWRVRVRETATSEQLWLESTGSGEAKELAGGNCNNHS 620

Query: 395 PTWSPSGRSLIFSRKKDGDTG-SKLYS 420
           P W     ++IF+       G   LY 
Sbjct: 621 PAWELDSSAVIFASDCGRAYGLPALYR 647



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 56/185 (30%), Gaps = 21/185 (11%)

Query: 163 YQSITGEKGDFNSRI-------LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           YQ+I  E G   S         +F      SG  +    +    G  ++      ++   
Sbjct: 473 YQAIAVEPGALFSGYPVVTRCGMFYQSMTSSGAGREGYVLRRLYGGRLQTFDFGGNE--L 530

Query: 216 EPRFSPNQQKVAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            P  + +   + +            L      T     P  I     ++     S +G+ 
Sbjct: 531 RPAAAGDGCGIEFEHVAQGRSTFLRLDPLTSRTEATAPPAEINPGNGVV-----SPDGRW 585

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE---GKEQL 328
            +   +   +  ++     S   + L      N S ++  DSS ++F SD     G   L
Sbjct: 586 RVRVRETATSEQLWLESTGSGEAKELAGGNCNNHSPAWELDSSAVIFASDCGRAYGLPAL 645

Query: 329 YVMQS 333
           Y    
Sbjct: 646 YRAPV 650


>gi|325186671|emb|CCA21220.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 629

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 72/223 (32%), Gaps = 18/223 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    ++     +FSPN   VA  + D    +R++  D         +      +   ++
Sbjct: 73  VYRGHNEPTTVAQFSPNGFWVA--SADTTGKVRIWSYDHPEHILKLEVNALAGRVDDLQW 130

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
               KR ++  Q    +         ++   +T       S ++ P     +  +  +  
Sbjct: 131 DCESKRIVVVGQSRGILARVFAWDTGSSLGEITGHQKRIQSVAFKPTRPFRIMTASED-- 188

Query: 326 EQLYVMQSNGSDQKRI--SQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
               V    G     +  S +   +Y +   +SP+GDL       G    I +      +
Sbjct: 189 --FNVCTHQGPPFTFLHCSNNGHKNYANCIRYSPKGDLAISV---GSDKEIFLYDGTTGE 243

Query: 383 ERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    + ++ +  WSP G  L+ S     D    L+ + 
Sbjct: 244 LLEKFPSQHNGSIYSVCWSPDGSQLLTSS---ADKTVVLWDVS 283



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 47/133 (35%), Gaps = 19/133 (14%)

Query: 300 TLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI--SQDKEASYFDPVW 354
           T  IN + +    SP+ S I      +G   +++ +        +              +
Sbjct: 464 TFSINWTPNCIAISPEGSLIA--VGAQGNHVIHLFELRDKSLHGVGELAGHLGPVTCLAF 521

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERL----LVEDSNLQAPTWSPSGRSLIFSRKK 410
           SP G  +A       +  + V      Q ++    +   + + +  WSPSG+ ++     
Sbjct: 522 SPDGGYLA---AGDTQRDVRVWDIASLQPKIEKLWVYHTTRIASVAWSPSGKYIV----- 573

Query: 411 DGDTGSKLYSIDL 423
            G +   +Y  ++
Sbjct: 574 SGSSDESIYIWNV 586



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 38/132 (28%), Gaps = 7/132 (5%)

Query: 212 QILFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
            I + P     SP    +A        ++ ++ +  +       +      +    FS +
Sbjct: 466 SINWTPNCIAISPEGSLIA-VGAQGNHVIHLFELRDKSLHGVGELAGHLGPVTCLAFSPD 524

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G        + +        LQ    +          S ++SP    IV  S     E +
Sbjct: 525 GGYLAAGDTQRDVRVWDIASLQPKIEKLWVYHTTRIASVAWSPSGKYIVSGSS---DESI 581

Query: 329 YVMQSNGSDQKR 340
           Y+        KR
Sbjct: 582 YIWNVETPLTKR 593


>gi|301772718|ref|XP_002921778.1| PREDICTED: THO complex subunit 3-like [Ailuropoda melanoleuca]
 gi|281342450|gb|EFB18034.1| hypothetical protein PANDA_010692 [Ailuropoda melanoleuca]
          Length = 350

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 83/242 (34%), Gaps = 15/242 (6%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           SV SG  +  L + +   G +     P+    +    +S + +++A  ++D      V+L
Sbjct: 25  SVTSGPTRYVLGMQELFRGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFD--KTASVFL 82

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++                +    +  +     ++   D+ + I+  D+++       NT 
Sbjct: 83  LEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIW--DVRTTKCIATVNTK 140

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
             NI+  +SPD   I       G +   V   +    +  ++++     +   W+   ++
Sbjct: 141 GENINICWSPDGQTIAV-----GNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNM 195

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             F         I    +    + +    SN     + P G+   +      D    L+ 
Sbjct: 196 F-FLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGK---YFATGSADALVSLWD 251

Query: 421 ID 422
           +D
Sbjct: 252 VD 253



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 29/230 (12%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R    S DQ+ + P  +P+     + T   +  +R++  D R  +    + N +   +
Sbjct: 93  NYRGHGDSVDQLCWHPS-NPD----LFVTASGDKTIRIW--DVRTTKCIATV-NTKGENI 144

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +G+   +  + D    I +   +S A E+     F     S++ D++       
Sbjct: 145 NICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ---FKFEVNEISWNNDNNMFFLT-- 199

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G   + ++        +      ++     + P G   A          + +   D  
Sbjct: 200 -NGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADA---LVSLWDVD-- 253

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDG------DTGSKLYSI 421
           +   +   S L  P    ++S  G+ L  + +         +TG KL+ +
Sbjct: 254 ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEV 303


>gi|257440209|ref|ZP_05615964.1| putative protein TolB [Faecalibacterium prausnitzii A2-165]
 gi|257197243|gb|EEU95527.1| putative protein TolB [Faecalibacterium prausnitzii A2-165]
          Length = 400

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 50/134 (37%), Gaps = 16/134 (11%)

Query: 324 GKEQLYVMQSNGSDQK-------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           GK +  +   +G++ +         ++  E S F    S  G L   T+       + V 
Sbjct: 131 GKTRFVLYNRSGNELRVESRTQNLYTKQLENSIFLCAMSDNGTLAVVTEDQTSMAKLLVY 190

Query: 377 KKDGSQERLLVEDSNLQAP---TWSPSGRSLIFS--RKKDGDTGSKLYSIDL-NGRNETL 430
                Q+      SN   P    +SP  R L  +      G   + LY I+L +G   +L
Sbjct: 191 SPSMEQQLSWSMTSNDGTPLRMAFSPDSRKLAAAAVTVSGGQVMTNLYLINLASGDPVSL 250

Query: 431 INTPAYASDPQWVG 444
           +N       PQW+G
Sbjct: 251 VNQGGV---PQWLG 261


>gi|195351955|ref|XP_002042481.1| GM23300 [Drosophila sechellia]
 gi|194124350|gb|EDW46393.1| GM23300 [Drosophila sechellia]
          Length = 775

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 77/228 (33%), Gaps = 36/228 (15%)

Query: 192 SLCVMDRDG--------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           +L +   DG        A +     +    +   R+SP+   +   T  ++ +++++   
Sbjct: 94  TLLICSNDGRFVILNKSARVERSISAHAAAISSGRWSPDGAGLL--TAGEDGVIKIW--- 148

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           +R       +      I   R++ N    +    +   + I  +   S    R      +
Sbjct: 149 SRSGMLRSTVVQNEESIRCARWAPNSTSIVFC--QGGHISIKPLAANSK-LIRWRAHDGL 205

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +S S+S  S+ I          +  +  + G++    S  +E +     ++P+ D +  
Sbjct: 206 VLSLSWSTQSNVIA---SGGEDFRFKIWDAQGANLF-TSAAEEYAITSVAFNPEKDYLLV 261

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRS 403
             F+     + +   +G         +   +P        +WSP G  
Sbjct: 262 GTFN----LLKLCHSNGWSY----NTARFSSPRVGSLFNLSWSPDGTQ 301



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 81/244 (33%), Gaps = 22/244 (9%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLT 207
              R +    S  + +SI+      +S       + + +      + +  R G  +R   
Sbjct: 100 NDGRFVILNKSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM-LRSTV 158

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              ++ +   R++PN   + +          + +     +    R      ++L+  +S+
Sbjct: 159 VQNEESIRCARWAPNSTSIVFC-----QGGHISIKPLAANSKLIRWRAHDGLVLSLSWST 213

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                  S  +D    I+  D Q           +   S +++P+   ++          
Sbjct: 214 QSNVIA-SGGEDFRFKIW--DAQGANLFTSAAEEYAITSVAFNPEKDYLL----VGTFNL 266

Query: 328 LYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           L +  SNG   +  R S  +  S F+  WSP G        +G+     V+      E+ 
Sbjct: 267 LKLCHSNGWSYNTARFSSPRVGSLFNLSWSPDGTQATCGTSTGQLIVAYVI------EQQ 320

Query: 386 LVED 389
           LV  
Sbjct: 321 LVSG 324


>gi|261407820|ref|YP_003244061.1| hypothetical protein GYMC10_4026 [Paenibacillus sp. Y412MC10]
 gi|261284283|gb|ACX66254.1| Domain of unknown function DUF2394 [Paenibacillus sp. Y412MC10]
          Length = 360

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 75/225 (33%), Gaps = 21/225 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +   V   + D+       L + +         + +S   +  +S +G+   +     
Sbjct: 116 SYHGGLVGLHSIDENGQAGKLLDEKKHADLVTVREDQQSRAHSAFYSPDGRYVFVQDLGL 175

Query: 280 EAMDIYSVD-----LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           + +  Y+V+     L  +   +L   +      ++ P  +     ++      +      
Sbjct: 176 DKILAYTVNENKQELSFHGETQLDAGIGP-RHLAFHPSGAYAYVINELNSSVTVLRYDQE 234

Query: 335 GSDQKRI--------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--- 383
               + +          D E+   +   S  G  +  +    +   +  + +D  +    
Sbjct: 235 AGRLEVLETVSTLPADFDGESYCAEIAVSADGKTVYGSNRGHDSIVVFNVHEDTGRLSPV 294

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGR 426
             +  E  + +  T  P G+ LI    +DG+    L++++  +G+
Sbjct: 295 QYISTEGGHPRHFTLMPGGKYLI-VANRDGN-NLVLFNVNPEDGK 337


>gi|172035650|ref|YP_001802151.1| hypothetical protein cce_0734 [Cyanothece sp. ATCC 51142]
 gi|171697104|gb|ACB50085.1| hypothetical protein cce_0734 [Cyanothece sp. ATCC 51142]
          Length = 567

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/181 (14%), Positives = 64/181 (35%), Gaps = 24/181 (13%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDE 280
           +  ++  A         ++ +D    + P  I N    + +  F  +G   L S +Q   
Sbjct: 131 DDGRIFVAQSLTPQGDGLFEIDATGSQPPTLINNNPGFLNSFDFGPDG--LLYSPLQLAG 188

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
           A  +  +D+ +  ++ +T  L +  +  ++                +L+ + +   +  +
Sbjct: 189 A--VVKIDVDTGVSQPVTAGLSVVTAVKFNSSG-------------ELFALNNLDGEVVQ 233

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           I     A+      SP  D + F+        +     I  +  +  + RL++E   L  
Sbjct: 234 IDPLTGATEVVVSLSPGLDSMVFSSNDLLYVTNNVDGTIHEINTETGEVRLVLESGGLTL 293

Query: 395 P 395
           P
Sbjct: 294 P 294


>gi|88602583|ref|YP_502761.1| peptidase S9, prolyl oligopeptidase active site region
           [Methanospirillum hungatei JF-1]
 gi|88188045|gb|ABD41042.1| peptidase S9, prolyl oligopeptidase active site region
           [Methanospirillum hungatei JF-1]
          Length = 678

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 41/296 (13%), Positives = 81/296 (27%), Gaps = 52/296 (17%)

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
              K+I+           R+    +SD++        GD +      S           +
Sbjct: 114 NGGKEIL--TLLDLSTMQREKKQKVSDELLSG-FAWLGDHSLVYAGASPDTPEDTRPGDV 170

Query: 194 CVMD----------RD---GANIRYLTPSRDQILFEPRFSPNQQKVAYAT------YDDE 234
            +MD           D   GA     + +     + P  SP+ + +AY +      + ++
Sbjct: 171 IIMDEIPDPVILKSYDIRSGAVTELTSNTDIIYAYHP--SPDGRYIAYKSSIYPEVWTEK 228

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMIL--APRFSSNGKRALISVQKDEAM--------DI 284
                Y++DT      + +             +S +     I    +  +        DI
Sbjct: 229 PSFSYYVLDTTTGTEDEVMTRIEGYQDENEFAWSPDSSMVYIGRNLNGGLRYPVSYASDI 288

Query: 285 YSVDLQSNATERLT-----------NTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                 +   E +                + +      D    V  +D     QL     
Sbjct: 289 VVYTPATRILEEIPLQWEKKMHKDLFNDDVEMRPF---DGGVYVLLAD-GTNPQLARYDK 344

Query: 334 NGSD--QKRISQDKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLL 386
           N +   +  +S + + + F    S  G  I +   S      I        + R L
Sbjct: 345 NDTGWTKTLLSGEHQGNIFALESSRDGSRIFYNFNSASVPPQIYAADVIAGEIRNL 400



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 62/178 (34%), Gaps = 29/178 (16%)

Query: 226 VAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAPRF-----------SSN----- 268
           +AYA+        +  L+D    +  K+      ++    +           S +     
Sbjct: 106 LAYASMPRNGGKEILTLLDLSTMQREKKQKVSDELLSGFAWLGDHSLVYAGASPDTPEDT 165

Query: 269 --GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD----- 321
             G   ++    D  + + S D++S A   LT+   I  +   SPD   I ++S      
Sbjct: 166 RPGDVIIMDEIPDPVI-LKSYDIRSGAVTELTSNTDIIYAYHPSPDGRYIAYKSSIYPEV 224

Query: 322 --REGKEQLYVMQ-SNGSDQKRISQ-DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
              +     YV+  + G++ + +++ +      +  WSP   ++   +         V
Sbjct: 225 WTEKPSFSYYVLDTTTGTEDEVMTRIEGYQDENEFAWSPDSSMVYIGRNLNGGLRYPV 282



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/94 (14%), Positives = 25/94 (26%), Gaps = 12/94 (12%)

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------FSGEKFAIGVMKKDGSQE 383
                     ++ + +  Y     SP G  IA+              F+  V+      E
Sbjct: 185 YDIRSGAVTELTSNTDIIY-AYHPSPDGRYIAYKSSIYPEVWTEKPSFSYYVLDTTTGTE 243

Query: 384 ----RLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                 +    +     WSP    +   R  +G 
Sbjct: 244 DEVMTRIEGYQDENEFAWSPDSSMVYIGRNLNGG 277


>gi|2924305|emb|CAA05343.1| prolyl dipeptidyl peptidase [Aspergillus oryzae]
          Length = 771

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 47/135 (34%), Gaps = 31/135 (22%)

Query: 311 PDSSQIVFESDREGKEQ------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           PD S +++ S+   + +       YV          +  D+E       WSP G+ IAF 
Sbjct: 104 PDLSSVLWASNHTKQYRHSFFADYYVQDVESLKSVPLMPDQEGDIQYAQWSPVGNTIAFV 163

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDS---NLQAPTW---------------SPSGRSLIF 406
           + +     + V   +G+  R+  +         P W               SP G  L +
Sbjct: 164 REND----LYVWD-NGTVTRITDDGGPDMFHGVPDWIYEEEILGDRYALWFSPDGEYLAY 218

Query: 407 SRKKDGDTGSKLYSI 421
                 +TG   Y++
Sbjct: 219 LSF--NETGVPTYTV 231



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 36/126 (28%), Gaps = 29/126 (23%)

Query: 218 RFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
              P+   V +A+     Y        Y+ D    ++   + +    I   ++S  G   
Sbjct: 101 WIHPDLSSVLWASNHTKQYRHSFFADYYVQDVESLKSVPLMPDQEGDIQYAQWSPVGNTI 160

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASY---------------SPDSS 314
               + D  +        +    R+T+    ++      +               SPD  
Sbjct: 161 AFVRENDLYVW------DNGTVTRITDDGGPDMFHGVPDWIYEEEILGDRYALWFSPDGE 214

Query: 315 QIVFES 320
            + + S
Sbjct: 215 YLAYLS 220


>gi|73985355|ref|XP_859995.1| PREDICTED: similar to WD repeat domain 51A isoform 2 [Canis
           familiaris]
          Length = 388

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 82/229 (35%), Gaps = 28/229 (12%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           ++ + SG + + L V      +  Y        +    FSP+   +A  + D    +R++
Sbjct: 31  TKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFSPSGHLLASGSRD--KTVRIW 88

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + + + +    R     + + +  F S+G+  + +   D+ + ++S   Q      L+  
Sbjct: 89  IPNVKGESTVFR--AHTATVRSVHFCSDGQSLV-TASDDKTVKVWSTHRQ-KFLFSLSQH 144

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +     A +SPD   IV  SD    + + +      +      +         + P G  
Sbjct: 145 INWVRCARFSPDGRLIVSASD---DKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTC 201

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           I+ +  +                   V  + + A ++ PSG  L+ +  
Sbjct: 202 ISSSGVN-------------------VHSAAVNALSFHPSGNYLLTASS 231



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 57/166 (34%), Gaps = 9/166 (5%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             R  I +  FS N K+   S   D  + ++ +  QS    R           ++SP   
Sbjct: 17  GHRDAITSVDFSLNTKQLA-SGSMDSCLMVWHMKPQSR-AYRFAGHKDAVTCVNFSPSGH 74

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +   S R+   ++++    G     + +   A+     +   G  +  T    +   + 
Sbjct: 75  LLASGS-RDKTVRIWIPNVKGEST--VFRAHTATVRSVHFCSDGQSLV-TASDDKTVKVW 130

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
              +      L    + ++   +SP GR ++ +     D   KL+ 
Sbjct: 131 STHRQKFLFSLSQHINWVRCARFSPDGRLIVSASD---DKTVKLWD 173


>gi|195437532|ref|XP_002066694.1| GK24428 [Drosophila willistoni]
 gi|194162779|gb|EDW77680.1| GK24428 [Drosophila willistoni]
          Length = 493

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 82/253 (32%), Gaps = 25/253 (9%)

Query: 127 EFRLWDVKDRKQII-----------------GKKFFSSPASWRKIAHTISDDIYQSITGE 169
           + R+WDVK  + ++                 G  + SS     K+    +D I       
Sbjct: 236 DCRVWDVKLGQCLLNIAGHTNAVTAVRWGGAGLIYTSSKDRSIKMW-RAADGILCRTFTG 294

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
              + + +   ++ V+       +   ++D  N   L   + Q L   RF         +
Sbjct: 295 HAHWVNNLALSTDYVLRTGPFEPVKKFNKDNYN--NLDTEQRQALALKRFQAVCPDDVES 352

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
                D   +YL     ++   R+   ++++   ++S + K    S   D+++ ++    
Sbjct: 353 FVSCSDDNTLYLWRNNQNKCVTRLTGHQNVVNDVKYSPDVKLIA-SASFDKSVRLWRA-H 410

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                      +    + ++S DS  IV  S       L V         +         
Sbjct: 411 DGQFLATFRGHVQAVYTLAWSADSRLIVSGSK---DSTLKVWSVQTKKLAQELPGHADEV 467

Query: 350 FDPVWSPQGDLIA 362
           F   W+P G  +A
Sbjct: 468 FGVDWAPDGSRVA 480



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 51/158 (32%), Gaps = 8/158 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
               +   + +S   D  + ++  + Q+    RLT    +     YSPD   I   S   
Sbjct: 344 AVCPDDVESFVSCSDDNTLYLWR-NNQNKCVTRLTGHQNVVNDVKYSPDVKLIASASF-- 400

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + + +++        +    + +   WS    LI             V  K  +QE
Sbjct: 401 -DKSVRLWRAHDGQFLATFRGHVQAVYTLAWSADSRLIVSGSKDSTLKVWSVQTKKLAQE 459

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            L      +    W+P G  +        D   KL++ 
Sbjct: 460 -LPGHADEVFGVDWAPDGSRVA---SGGKDKVIKLWAY 493



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 32/97 (32%), Gaps = 9/97 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
            P   + +    FSPN + +A  + D      V L D   +         +  +L   +S
Sbjct: 119 MPGHAEAIVSLSFSPNGKHLASGSGDT----TVRLWDLTTETPHYTCSGHKQWVLCVSWS 174

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTL 301
            +G+         +A  I   D ++       LT   
Sbjct: 175 PDGELLA---SACKAGQIIIWDPETGQQKGRPLTGHK 208



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 51/144 (35%), Gaps = 21/144 (14%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
               R T+++  +  A    S+SP+   +   S   G   + +               + 
Sbjct: 110 RPVTRCTSSMPGHAEAIVSLSFSPNGKHLASGS---GDTTVRLWDLTTETPHYTCSGHKQ 166

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSG--- 401
                 WSP G+L+A    +G    I +   +  Q++   L     ++   +W P     
Sbjct: 167 WVLCVSWSPDGELLASACKAG---QIIIWDPETGQQKGRPLTGHKKHINCLSWEPYHQNV 223

Query: 402 --RSLIFSRKKDGDTGSKLYSIDL 423
             R L  S   DGD   +++ + L
Sbjct: 224 ECRKLA-SASSDGD--CRVWDVKL 244


>gi|191638799|ref|YP_001987965.1| Peptidase, S9 family [Lactobacillus casei BL23]
 gi|190713101|emb|CAQ67107.1| Peptidase, S9 family [Lactobacillus casei BL23]
 gi|327382843|gb|AEA54319.1| WD40-like beta Propeller containing protein [Lactobacillus casei
           LC2W]
 gi|327386029|gb|AEA57503.1| WD40-like beta Propeller containing protein [Lactobacillus casei
           BD-II]
          Length = 658

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 62/186 (33%), Gaps = 23/186 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-----VYLMDTRIDRAPKRIGNFRSM 259
            L   R+        SP+ Q +A+      D         YL++    +           
Sbjct: 173 RLVMGREHEFEVGAISPDGQTLAFTAERLPDDPNDFSQATYLLNLADRQVTMVNDQLPQA 232

Query: 260 ILAP-RFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISASYSPDS 313
            L+P  FS++GK+ L+    +   +     ++  DL +   + + + +  +I    + D 
Sbjct: 233 ALSPEAFSADGKQLLLVGSDNHLPNVSQSHLWHYDLATKTLQDVADDIDFDIPGHVNGDF 292

Query: 314 SQIVFESDRE----------GKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLI 361
            Q + E   +          G +        G   ++++          D   +P    +
Sbjct: 293 QQDLSEKVADFATADYYLTIGFDHGKTSLYAGGPDEQLTPLVGGRRHVTDYALTPDHHGV 352

Query: 362 AFTKFS 367
            FT+ +
Sbjct: 353 VFTEST 358



 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 30/257 (11%), Positives = 71/257 (27%), Gaps = 47/257 (18%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S         +C ++  G  I Y    +      P  SP+QQ +A+ +   +   +V+L 
Sbjct: 32  SEADNTYYQRICFVNHRGGTIAYGFDQKH--DRHPLLSPDQQWLAFLSQASDKTTQVFLQ 89

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---------------IYSV 287
                 A +       +     + ++ +   I                         Y +
Sbjct: 90  AVNGGTAKQFSAEKEGVSYF-GWQADSQALFIQTTVGAKPKKTDKQWPQPVTVSRVPYKL 148

Query: 288 DLQS------------NATERLTNTLFINISASY-----SPDSSQIVFESDR------EG 324
           +                   + T+ L +     +     SPD   + F ++R      + 
Sbjct: 149 NGVGLLPEHVAYELRVQRLRQKTSRLVMGREHEFEVGAISPDGQTLAFTAERLPDDPNDF 208

Query: 325 KEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSG-----EKFAIGVMKK 378
            +  Y++         +  Q  +A+     +S  G  +             +  +     
Sbjct: 209 SQATYLLNLADRQVTMVNDQLPQAALSPEAFSADGKQLLLVGSDNHLPNVSQSHLWHYDL 268

Query: 379 DGSQERLLVEDSNLQAP 395
                + + +D +   P
Sbjct: 269 ATKTLQDVADDIDFDIP 285


>gi|1778051|gb|AAB42010.1| Prt1 homolog [Homo sapiens]
          Length = 873

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 289 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 340

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 341 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 386

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 387 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 444

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 445 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEI 504

Query: 430 LI 431
            +
Sbjct: 505 RV 506



 Score = 43.1 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 31/204 (15%), Positives = 66/204 (32%), Gaps = 23/204 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 471 SWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 530

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNT----LFINISASYSPDSSQIVFESDREG 324
            +            +I+ +       +++           I+ ++ P+ S+  F      
Sbjct: 531 DRTPKGTQGVVTNFEIFRM-----REKQVPVDVVEMKETIIAFAWEPNGSK--FAVLHGE 583

Query: 325 KEQLYVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             ++ V      N    + I    +       WSPQG  +          A+  +     
Sbjct: 584 APRISVSFYHVKNNGKIELIKMFDKQQANTIFWSPQGQFVVLAGLRSMNGALAFVDTSDC 643

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
               + E        W P+GR ++
Sbjct: 644 TVMNIAEHYMASDVEWDPTGRYVV 667


>gi|78045826|ref|YP_362001.1| putative aminopeptidase precursor [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78034256|emb|CAJ21901.1| putative aminopeptidase precursor [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 694

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 50/140 (35%), Gaps = 10/140 (7%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKF 366
           S SPD   + + +   G   ++V   +  DQ R I++D      +  W+ Q + + + + 
Sbjct: 60  SISPDGKYLSWVAPLAGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPNTLLYLRD 119

Query: 367 SGE--KFAIGVMKKDGSQERLLVEDSNLQAPTW-----SPSGRSLIFSRKKDGDTGSKLY 419
           +G    F +  +       + L       A  +      P   S++            LY
Sbjct: 120 NGGDEDFHLFSVNLADGSSKDLTPFKKTNAEVYRVSAQHP--ESIMVGMNDRDAKWHDLY 177

Query: 420 SIDLNGRNETLINTPAYASD 439
            +DL     TL+     + D
Sbjct: 178 RVDLASGKRTLVQKNTDSLD 197



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 25/171 (14%), Positives = 59/171 (34%), Gaps = 13/171 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLF---INISASYSPDSSQIVFE 319
             S +GK           ++++   + + +    +T        N   +Y P+   +++ 
Sbjct: 60  SISPDGKYLSWVAPLAGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPN--TLLYL 117

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIG 374
            D  G E   L+ +       K ++  K+ +      S   P+  ++       +   + 
Sbjct: 118 RDNGGDEDFHLFSVNLADGSSKDLTPFKKTNAEVYRVSAQHPESIMVGMNDRDAKWHDLY 177

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSIDLN 424
            +     + R LV+ +      +   G   L ++ +   D G +L   D N
Sbjct: 178 RVDLASGK-RTLVQKNTDSLDAYLLDGDYQLRYATRATDDAGRELLVPDGN 227



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 8/94 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDS----NLQAPTWSP 399
                 +   SP G  +++         + V   D   Q R + +D+         T+ P
Sbjct: 52  GNPERANVSISPDGKYLSWVAPLAGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQP 111

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
           +  +L++ R   GD    L+S++L +G ++ L  
Sbjct: 112 N--TLLYLRDNGGDEDFHLFSVNLADGSSKDLTP 143


>gi|116193331|ref|XP_001222478.1| hypothetical protein CHGG_06383 [Chaetomium globosum CBS 148.51]
 gi|88182296|gb|EAQ89764.1| hypothetical protein CHGG_06383 [Chaetomium globosum CBS 148.51]
          Length = 968

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 45/226 (19%), Positives = 89/226 (39%), Gaps = 28/226 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
               +  +  +  D  ++R L  +P+ +QI     F     ++ +A+    D   V    
Sbjct: 627 GDKAQLRMQRIRDDNQHVRSLVLSPNFNQIASIGAF---GLRLYWASTVSNDFCNV---- 679

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRAL-ISVQKDEAMDIYSVDLQSNATERLTNTLF 302
             +   P+ I    S IL    S +G R + IS ++D A+     D ++ +  RL     
Sbjct: 680 --VPSRPREIQGPYSGILDVALSPDGTRLVSISSRQDAAIW----DAETGS--RLQTIPD 731

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ---DKEASYFDPVWSPQGD 359
             ++AS+SP+ + +   +      +L V         R+ +     E++     ++P G 
Sbjct: 732 SGLAASFSPNGADVALLTT---TGKLKVWSLAHQRYTRVFEQPASGESASGSVAFAPDGR 788

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
               T F     A  +  +   Q   + +D+  +A  +S +GR L 
Sbjct: 789 --ITTSFEHMIRAWKMFHR--LQMETMADDAAAKALVFSSNGRQLA 830



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 48/160 (30%), Gaps = 6/160 (3%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           L+ +  +++    FSP+   +A A   + +   V  +          +    +      F
Sbjct: 386 LSDAEPEVVGPVNFSPDGAWLAAALKGNYNGKTVQKVRVWDMATGNSVWTLENASSWVAF 445

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
             N    L ++     +  +  DL     +           A++SPD   +      +G 
Sbjct: 446 PPN-HSLLGTITSPGEVRFW--DLAKGVWKDRIIYGLNTAGAAFSPDGVWLAAA---DGN 499

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
                  + G        +  +  F   +S  G  +A   
Sbjct: 500 RICVQDWAEGRCTSWFRHESTSCPFSLAYSANGARLASAH 539


>gi|182413150|ref|YP_001818216.1| WD40 domain-containing protein [Opitutus terrae PB90-1]
 gi|177840364|gb|ACB74616.1| WD40 domain protein beta Propeller [Opitutus terrae PB90-1]
          Length = 455

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 41/102 (40%), Gaps = 8/102 (7%)

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +   M+  G  ++ + Q +   ++    SP G       FSG    + ++ +   Q+RLL
Sbjct: 353 RTNAMKLLGQVEENMGQGRLGGFWHCNGSPDGRWAVADNFSG---NVTLIDRRNGQQRLL 409

Query: 387 VED----SNLQAPTWSPSGRSLIFSRKKDGDTGS-KLYSIDL 423
             D     +   P +SP  + +     +  D  S  L  ID+
Sbjct: 410 TTDHKMRPDHTHPIFSPDSKRVAIQSGQLTDGKSLDLMVIDI 451



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/69 (15%), Positives = 23/69 (33%), Gaps = 6/69 (8%)

Query: 289 LQSNATERLTNTLFINISA-----SYSPDSSQIVFESDREG-KEQLYVMQSNGSDQKRIS 342
           +       LT     +        +++ D   I+F SDR G   Q +++     D  +++
Sbjct: 43  VTGLPITVLTTDPANDAKPYQTHTTWTADGQWIIFRSDRGGSGSQAFIVNEKSGDILQLT 102

Query: 343 QDKEASYFD 351
                    
Sbjct: 103 AGPRTGTGS 111



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 43/298 (14%), Positives = 96/298 (32%), Gaps = 40/298 (13%)

Query: 48  VSIAFTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLG 107
           +  A    V       +V  V+  +L+ S  F L + +S           P         
Sbjct: 153 IPDAMAGTVKEASAYERVVCVLPAELRDSGGFALDADESCAYWGVTWGPPPARPAPTHAN 212

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS---SPASWRKI------AHTI 158
                     +    R +V+ +  D K+ +    ++F +    P   R+I         +
Sbjct: 213 ----------RTSDGRSQVDSKNTDPKEERAAARERFANAGKGPGGIRRIDLKTGEITKV 262

Query: 159 SDDIYQSITGEKGDFN-SRILFVSESVVSGIIKNSLCVMDRDGANIR--YLTPSRDQILF 215
            D   +    +   +    I++  E+  +G     +  +  DG   R  Y+    + +  
Sbjct: 263 IDLDIRMGHVQTNLWVPGEIIYCHET--TGDAPQRMWTVRGDGTGNRPLYVETPDEWVTH 320

Query: 216 EPRFSPNQ------QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF---- 265
           E    P++        + Y       +  + L    +    +   N     L   +    
Sbjct: 321 ETVAGPDEVMFNIMGHLPYLREHPTGVAVINLRTNAMKLLGQVEENMGQGRLGGFWHCNG 380

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQIVFES 320
           S +G+ A+     + + ++  +D ++     LT        +    +SPDS ++  +S
Sbjct: 381 SPDGRWAV---ADNFSGNVTLIDRRNGQQRLLTTDHKMRPDHTHPIFSPDSKRVAIQS 435


>gi|163755706|ref|ZP_02162824.1| WD40-like beta propeller repeat protein [Kordia algicida OT-1]
 gi|161324227|gb|EDP95558.1| WD40-like beta propeller repeat protein [Kordia algicida OT-1]
          Length = 323

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/201 (17%), Positives = 68/201 (33%), Gaps = 33/201 (16%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLT----NTLFINISASYSPDSSQIV 317
             S        ++   +      +  +  +      +    +  + +I  ++SPD +++ 
Sbjct: 51  AISPKNDEIFFTLDAPKNAFRTILTSKKINGKWSEFSIAAFSGNYYDIEPAFSPDGTKLF 110

Query: 318 FESDR-EGKEQL--------YVMQSNG--SDQKRI--SQDKEASYFDPVWSPQGDLIAFT 364
           F S R  GKE+         +V + NG   +  R+  + + + + + P  +  G  I FT
Sbjct: 111 FASKRPTGKEKTPKKDYDLWFVTKVNGVWKNPIRLPETINTDKNEYYPSLANNGT-IYFT 169

Query: 365 KFS---GEKFAIGVMKKDGSQERLLVEDSN-------LQAPTWSPSGRSLIFSRK-KDGD 413
                   K  I   +      +  V                 SP    +IF    + G 
Sbjct: 170 AERADAKGKEDIYKSEFVNGNYQTPVSLGTGVNTKTYEYNAYVSPDESFIIFGSYGRKGS 229

Query: 414 TG-SKLY-SIDLNGRNETLIN 432
            G   LY S + NG  +  I+
Sbjct: 230 LGRGDLYISFNENGIWKEAIH 250



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 45/247 (18%), Positives = 89/247 (36%), Gaps = 46/247 (18%)

Query: 150 SWRKIAHTI-SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
           + R +A +  +D+I+ ++   K  F  R +  S+ +     + S+               
Sbjct: 46  NVRDMAISPKNDEIFFTLDAPKNAF--RTILTSKKINGKWSEFSIAAF------------ 91

Query: 209 SRDQILFEPRFSPNQQKVAYATYD-------DEDILRVYLMD--TRIDRAPKRI---GNF 256
           S +    EP FSP+  K+ +A+          +    ++ +     + + P R+    N 
Sbjct: 92  SGNYYDIEPAFSPDGTKLFFASKRPTGKEKTPKKDYDLWFVTKVNGVWKNPIRLPETINT 151

Query: 257 RSMILAPRFSSNGKRALISVQK---DEAMDIYSVD-LQSNATERLTNTLFINI-----SA 307
                 P  ++NG     + ++       DIY  + +  N    ++    +N      +A
Sbjct: 152 DKNEYYPSLANNGT-IYFTAERADAKGKEDIYKSEFVNGNYQTPVSLGTGVNTKTYEYNA 210

Query: 308 SYSPDSSQIVFESD----REGKEQLYV-MQSNGSDQKRISQDKEASYFDPVWSP----QG 358
             SPD S I+F S       G+  LY+    NG  ++ I   K  +     + P      
Sbjct: 211 YVSPDESFIIFGSYGRKGSLGRGDLYISFNENGIWKEAIHLGKLINSNQIDYCPFVTFDK 270

Query: 359 DLIAFTK 365
               +T 
Sbjct: 271 KYFFYTS 277


>gi|169773327|ref|XP_001821132.1| dipeptidyl peptidase 4 [Aspergillus oryzae RIB40]
 gi|238491296|ref|XP_002376885.1| extracellular dipeptidyl-peptidase Dpp4 [Aspergillus flavus
           NRRL3357]
 gi|121802887|sp|Q2UH35|DPP4_ASPOR RecName: Full=Dipeptidyl peptidase 4; AltName: Full=Dipeptidyl
           peptidase IV; Short=DPP IV; Short=DppIV; Flags:
           Precursor
 gi|306755732|sp|B8N970|DPP4_ASPFN RecName: Full=Probable dipeptidyl peptidase 4; AltName:
           Full=Dipeptidyl peptidase IV; Short=DPP IV; Short=DppIV;
           Flags: Precursor
 gi|83768993|dbj|BAE59130.1| unnamed protein product [Aspergillus oryzae]
 gi|220697298|gb|EED53639.1| extracellular dipeptidyl-peptidase Dpp4 [Aspergillus flavus
           NRRL3357]
          Length = 771

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 47/135 (34%), Gaps = 31/135 (22%)

Query: 311 PDSSQIVFESDREGKEQ------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           PD S +++ S+   + +       YV          +  D+E       WSP G+ IAF 
Sbjct: 104 PDLSSVLWASNHTKQYRHSFFADYYVQDVESLKSVPLMPDQEGDIQYAQWSPVGNTIAFV 163

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDS---NLQAPTW---------------SPSGRSLIF 406
           + +     + V   +G+  R+  +         P W               SP G  L +
Sbjct: 164 REND----LYVWD-NGTVTRITDDGGPDMFHGVPDWIYEEEILGDRYALWFSPDGEYLAY 218

Query: 407 SRKKDGDTGSKLYSI 421
                 +TG   Y++
Sbjct: 219 LSF--NETGVPTYTV 231



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 16/126 (12%), Positives = 36/126 (28%), Gaps = 29/126 (23%)

Query: 218 RFSPNQQKVAYAT-----YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
              P+   V +A+     Y        Y+ D    ++   + +    I   ++S  G   
Sbjct: 101 WIHPDLSSVLWASNHTKQYRHSFFADYYVQDVESLKSVPLMPDQEGDIQYAQWSPVGNTI 160

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASY---------------SPDSS 314
               + D  +        +    R+T+    ++      +               SPD  
Sbjct: 161 AFVRENDLYVW------DNGTVTRITDDGGPDMFHGVPDWIYEEEILGDRYALWFSPDGE 214

Query: 315 QIVFES 320
            + + S
Sbjct: 215 YLAYLS 220


>gi|307195779|gb|EFN77593.1| WD repeat-containing protein 82 [Harpegnathos saltator]
          Length = 307

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 17/158 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           + ++ +SG +  SL + D    N   +      +   P  + + + + +A   + + +++
Sbjct: 113 IEDTFLSGSLDKSLRLWDLRSPNCHGVMN----VSGRPVAAYDPEGLIFAAGVNSESIKL 168

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           Y +   D       K            +FS +GK  LIS        I  +D       +
Sbjct: 169 YDLRSFDKGPFVTFKVSQEKECDWTGLKFSRDGKTILISTN---GSTIRLIDAFHGTPLQ 225

Query: 297 LT-----NTLFINISASYSPDSSQIVFESDREGKEQLY 329
            T     N   I I AS+SPD SQ VF    +G+  ++
Sbjct: 226 -TFAGYLNNKGIAIEASFSPD-SQFVFSGSTDGRVHVW 261


>gi|312195638|ref|YP_004015699.1| hypothetical protein FraEuI1c_1773 [Frankia sp. EuI1c]
 gi|311226974|gb|ADP79829.1| WD40 repeat, subgroup [Frankia sp. EuI1c]
          Length = 1407

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 40/283 (14%), Positives = 82/283 (28%), Gaps = 43/283 (15%)

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            VS      L + D   A+       RD+ +     S +   +   +   ED   V     
Sbjct: 1076 VSAGRHGVLRIWDVRAADADVAPGGRDEGMRACVASHDGSWIVSVS---EDSTAVQWDVA 1132

Query: 245  RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +     +G   S       + +     +   +D  + ++     +     + +     
Sbjct: 1133 TGEPGAALVGERLSPNRGSAVAPDDSWVAVP-DRDGGVRLWE--PATGTIRAVLSAPSEV 1189

Query: 305  ISASYSPDSSQIVFESDREGKEQLY------------VMQSNG---------SDQKRISQ 343
               +  PD S +V  + R+G  +++                +G          +     Q
Sbjct: 1190 RGYAVGPDGSWLV-GACRDGVARMWDTQSGEWLASFVARDRSGPATASGLEHGEPPAPGQ 1248

Query: 344  DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA--PTWSPSG 401
                S+   V +P G  +A     G +  I V      +    +     +      +P G
Sbjct: 1249 HGVDSHRGCVVAPDGSWVAV---GGGQRDILVWDVATLEPLAELSGHTNEVLGLAAAPDG 1305

Query: 402  RSLIFSRKKDGDTGSKLYSID-------LNGRNETLINTPAYA 437
            R   F      D   +++  D       L+G + T+      A
Sbjct: 1306 R---FMISAGSDHTVRVWWTDGWRAGPVLDGHSHTVRAAAVSA 1345


>gi|271962247|ref|YP_003336443.1| hypothetical protein Sros_0677 [Streptosporangium roseum DSM 43021]
 gi|270505422|gb|ACZ83700.1| hypothetical protein Sros_0677 [Streptosporangium roseum DSM 43021]
          Length = 381

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 62/176 (35%), Gaps = 9/176 (5%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDILRVYLMDTRID 247
            +  +     D  ++       D+ +  P   +P+ + +AY +  ++      L   +  
Sbjct: 111 GRWRVVTRTGDTYDVPQALGLTDKAVLGPLTITPDGRALAYYSDREQKFKIRDLASGKEL 170

Query: 248 RAPKRIGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
            AP ++   +    +  R S NG+    +    +      +D+++  T  L       + 
Sbjct: 171 TAPVKVPRRQLESEVFLRVSDNGRHLAFTSFAGKNG--LLIDMRNGRTTPLPTGW---MP 225

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            S + D    V  + ++   ++ ++   G    R S   E        +P G  +A
Sbjct: 226 VSVADDGDPAVVVNWKDTSSRVRLVSPGG--VIRESSIPEYGQRFSALAPDGRTMA 279


>gi|229492350|ref|ZP_04386157.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Rhodococcus erythropolis SK121]
 gi|229320759|gb|EEN86573.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Rhodococcus erythropolis SK121]
          Length = 646

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 55/206 (26%), Gaps = 49/206 (23%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
            G I   +C +  DG+            L  PR SP+  K+A+  ++   +         
Sbjct: 147 DGAITRDICAIPLDGSGNIRSIVGGSDFLSSPRLSPSGTKIAWIAWNHPQMPW------- 199

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                                 +G    ++   D     YSV +       L        
Sbjct: 200 ----------------------DGTELRVAPLVDGVAQAYSVLIGGLEESVL-------- 229

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--- 362
              +  D  ++   SDR G   +Y +      +   +    A +  P W           
Sbjct: 230 QPEWITD-DELYAISDRSGWWNIYRV----GGKIIPTCPLNADFGGPQWRFGARWFVELD 284

Query: 363 ----FTKFSGEKFAIGVMKKDGSQER 384
                T  +     + V+     + R
Sbjct: 285 NGHLLTARTVGTDTLAVLDPASGELR 310


>gi|168700581|ref|ZP_02732858.1| hypothetical protein GobsU_13707 [Gemmata obscuriglobus UQM 2246]
          Length = 952

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL---FINISASYSPDSSQI 316
           + +P +S +G +        +A  I   D ++ A  ++T T     +  +  ++ D +++
Sbjct: 155 VGSPAWSPDGSKLAFLALFSDATHICVADTETGACRQITKTPVLATLVTTLQWAYDGTRL 214



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 4/68 (5%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAPT 396
           +     A    P WSP G  +AF     +   I V   +    R + +     + +    
Sbjct: 147 VRAPTGARVGSPAWSPDGSKLAFLALFSDATHICVADTETGACRQITKTPVLATLVTTLQ 206

Query: 397 WSPSGRSL 404
           W+  G  L
Sbjct: 207 WAYDGTRL 214



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSPQGDLI 361
           S ++SPD S++ F +       + V  +     ++I++            W+  G  +
Sbjct: 157 SPAWSPDGSKLAFLALFSDATHICVADTETGACRQITKTPVLATLVTTLQWAYDGTRL 214


>gi|163748623|ref|ZP_02155876.1| dipeptidyl anminopeptidase [Shewanella benthica KT99]
 gi|161331733|gb|EDQ02537.1| dipeptidyl anminopeptidase [Shewanella benthica KT99]
          Length = 688

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 9/112 (8%)

Query: 330 VMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM----KKDGS 381
           V   + S Q ++    +   E        S  G  +AF K       I +M      D +
Sbjct: 37  VADQDQSQQVQLLPVEAYFNEQGISGLKSSSDGKWLAFFKEYQGAKNIYLMAAGADLDTA 96

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                 +D       WS  G  + F +   G+  +++Y + L+      + +
Sbjct: 97  LPITTSKDPLNSF-RWSRQGDEIFFLKDTGGNENTQIYKLSLDTSQPKPVPS 147



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 266 SSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           SS+GK      +   A +IY +    DL +     +T +     S  +S    +I F  D
Sbjct: 66  SSDGKWLAFFKEYQGAKNIYLMAAGADLDTALP--ITTSKDPLNSFRWSRQGDEIFFLKD 123

Query: 322 REGKE--QLYVMQSNGSDQKRI 341
             G E  Q+Y +  + S  K +
Sbjct: 124 TGGNENTQIYKLSLDTSQPKPV 145


>gi|281371388|ref|NP_001163823.1| DKFZP434C245-like protein [Takifugu rubripes]
 gi|17488592|gb|AAL40359.1|AC090119_2 unknown protein [Takifugu rubripes]
          Length = 356

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 12/189 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +       I+    FSP+   VA ++ D      V L    I    K I    + + +  
Sbjct: 12  FRFVGHQDIITGVHFSPSGNLVATSSKDR----TVRLWKPSIKGESKVIKAHTAAVRSVA 67

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G+R   +   D+++ ++SV  +      L         A +SPD+  I    D   
Sbjct: 68  FSHDGQRLA-TASDDKSVKVWSVP-RHCFLYSLNQHTNWVCCARFSPDARLIASCGD--- 122

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
              + +  ++         D   S     ++P G  IA    SG   ++ +     ++  
Sbjct: 123 DRTVRLWDTSSKHCINCFTDYGGSATSVDFNPSGTCIA---SSGSDSSLRIWDLRTNKLI 179

Query: 385 LLVEDSNLQ 393
              + SN  
Sbjct: 180 QHYQGSNFM 188


>gi|113477401|ref|YP_723462.1| hypothetical protein Tery_3964 [Trichodesmium erythraeum IMS101]
 gi|110168449|gb|ABG52989.1| hypothetical protein Tery_3964 [Trichodesmium erythraeum IMS101]
          Length = 940

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 60/194 (30%), Gaps = 13/194 (6%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +D DG     LT +     +  +F  N   V         +     + T         G+
Sbjct: 539 IDIDGDRNNDLTSNGFTDGYVAKFDSNGNLVWAKQIGGSSLDYANSITTDSSDNVFVGGS 598

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPD 312
           F   I       +G         +   D + + L    +   T+    +   +   ++ D
Sbjct: 599 FYGNI---DIDGDGNN---DFTSNGFGDGFVIKLSEQTSSPQTSPPPTDTEPTRFDFNAD 652

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSG 368
               +F     G  ++++M   G+    +   K    +D      ++  G    F +   
Sbjct: 653 GVADIFWRHPNGANRIWLMNDEGTRDSTVDPGKFGKAWDVAGVADFNTDGVADIFWRHPN 712

Query: 369 EKFAIGVMKKDGSQ 382
               I +M  +G++
Sbjct: 713 GANRIWLMNDEGTR 726



 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 69/176 (39%), Gaps = 14/176 (7%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPR----FSPNQQKVAYATYDDEDILRVYLMDTRI 246
           N + +M+ +G     + P +    ++      F+ +     +  +      R++LM+   
Sbjct: 764 NRIWLMNDEGTRDSTVNPGKFGKAWDVAGVADFNTDGVADIF-WHHPNGANRIWLMNDEG 822

Query: 247 DRA----PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL---TN 299
            R     P + G    +     F+++G   +     + A  I+ ++ +     RL   + 
Sbjct: 823 TRDSTVSPGKFGKAWDVAGVADFNTDGVADIFWRHPNGANRIWLMNDEGTRDSRLNPGSF 882

Query: 300 TLFINIS--ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
               +++  A ++ D    +F     G  ++++M   G+    ++  + +S +D V
Sbjct: 883 RSAWDVAGVADFNTDGVADIFWHHPNGANRIWLMNDEGTKDSGLNPARFSSTWDVV 938


>gi|195153389|ref|XP_002017609.1| GL17219 [Drosophila persimilis]
 gi|194113405|gb|EDW35448.1| GL17219 [Drosophila persimilis]
          Length = 345

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 60/185 (32%), Gaps = 7/185 (3%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS      L + D             ++ + +   S N + +A       D   V L D+
Sbjct: 71  VSASADRLLKLWDVRTIQSYQTLAGHEKGINDVVCSQNGKLIASC----GDDKTVKLWDS 126

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
             +   K +    + +    F+      ++S   D ++ ++ +       + L       
Sbjct: 127 NSNSCAKTLQGHSNCVFCCCFNPQ-TNLILSASFDGSVHLWDL-RTGRTLKSLAAHGDST 184

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S  ++   S  +  S  +G  +++   +    +  ++ D         +SP G  I  +
Sbjct: 185 TSVDFNRTGSHFI-TSSHDGFIRMWESATFHLVKTLLTDDDNPVVGHAKFSPNGKYILSS 243

Query: 365 KFSGE 369
            F   
Sbjct: 244 TFDNT 248


>gi|163736976|ref|ZP_02144394.1| cytochrome c, class I [Phaeobacter gallaeciensis BS107]
 gi|161389580|gb|EDQ13931.1| cytochrome c, class I [Phaeobacter gallaeciensis BS107]
          Length = 440

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 50/330 (15%), Positives = 101/330 (30%), Gaps = 65/330 (19%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            H  +D+ + ++ G  G   +  +     V +G   N++ +             + +  +
Sbjct: 27  GHVDADE-FTTLKGHGGPVMALAVSPEGQVATGSFDNAIGLWRD---RSPRWLEAHEAAV 82

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               F    + V        D   +YL     +   + IG     I A   + + +  L+
Sbjct: 83  TALAFMDAGRLV-----SAGDDFALYLWPQGSNT-GELIGRHLGKIRALAVTPD-RDTLV 135

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S   D  + ++   L   + +R+     +N  A    D    V+ +   G  Q+ V +  
Sbjct: 136 SGSWDGEIGLW--PLGDGSEQRIKVGSGVNDVAV-GADG--AVYAATMSG--QILVYEDA 188

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI--------------------- 373
               +R+           V  P GD +A+    G    +                     
Sbjct: 189 DRSPRRLVDQGFG-INQLVLGPDGDWLAYGAVDGATRIVDSQTGDPVADFTLERRPILAM 247

Query: 374 ----------------GVMKKDGSQERL-----LVEDSNLQAPTWSPSGRSLIFSRKKDG 412
                            +M  D    R+        D  + A  ++P GR++  +   D 
Sbjct: 248 AYHEGTARLAVGDGQGYIMMVDTETWRISADFRATRDGPVWALEFAPDGRTVWAAGLDDL 307

Query: 413 DTGSKLYSIDLNGRNETLINTP-AYASDPQ 441
             G   + + L G  E  +     + +DP 
Sbjct: 308 AYG---WPVALMGETEAQMAGNRGFLTDPA 334


>gi|126662889|ref|ZP_01733888.1| dipeptidyl-peptidase [Flavobacteria bacterium BAL38]
 gi|126626268|gb|EAZ96957.1| dipeptidyl-peptidase [Flavobacteria bacterium BAL38]
          Length = 780

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 57/180 (31%), Gaps = 27/180 (15%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTN--------TLFINISASYSP 311
           +P +S +GK A+I ++  +    + V  DL S     L +           I     YS 
Sbjct: 324 SPVYSKDGKNAVIEIRSQDNKHRWMVQLDLVSGKITELDHQHDEAWIGGPGI---PGYSF 380

Query: 312 DSS--------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD--LI 361
                         F+S+      LY        ++ +++       +   S       I
Sbjct: 381 GGGTLGFIDNYTFYFQSEATAFSHLYTYNLKTKKKEALTK-GNWEVREVKLSNDKKSFYI 439

Query: 362 AFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             T       +   +     +   +L  D + +    SP  ++L+  R    +   +LY 
Sbjct: 440 TTTTTHPGNRSFYKLDIASKKMTGILTNDGSYEV-ELSPDEQTLL-VRYSYKNKPWELYV 497


>gi|157962595|ref|YP_001502629.1| peptidase S9 prolyl oligopeptidase [Shewanella pealeana ATCC
           700345]
 gi|157847595|gb|ABV88094.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella pealeana ATCC 700345]
          Length = 677

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 34/235 (14%), Positives = 75/235 (31%), Gaps = 27/235 (11%)

Query: 221 PNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P   ++     D       +  +  ++       + + +      AP  S +  +     
Sbjct: 162 PKGSRLICIREDHRVKGEPVNSLVGINLSYADEGETLISGADFYSAPTLSPDQTQLAWVS 221

Query: 277 QKD-----EAMDIYSVDLQSN----ATERL-TNTLFINISASYSPDSSQIVFESDREGKE 326
            +      +   ++  DL S        ++ T          +SP   Q+ F +D     
Sbjct: 222 WQHPNMPWDETQLWIADLDSKGAIQNPRQIKTEQQGSITQPLFSPTG-QLYFVADFNNWW 280

Query: 327 QLYVMQSNGSDQKRISQDKE---ASYFDPVWS----PQGDLIAFTKFSGEKFAIGVMKKD 379
            +Y +      +  + +  E   A +    +S     +  L+A     GE   I +    
Sbjct: 281 NIYRLNEALEPEIVLEKQAEFAVADWQVGKYSYAFENEHSLVASYNHGGEAELIRIDTIS 340

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           G+ E +       +      +G  ++F  +K+      +Y I   GR+  L+  P
Sbjct: 341 GAVEAIAAN--FAEITYVIQNGSEVLFVGEKE-TPEKGIYKI--QGRSAQLVYAP 390


>gi|114052729|ref|NP_001039765.1| THO complex subunit 3 [Bos taurus]
 gi|126352260|sp|Q29RH4|THOC3_BOVIN RecName: Full=THO complex subunit 3; Short=Tho3
 gi|88954125|gb|AAI14173.1| THO complex 3 [Bos taurus]
          Length = 351

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 83/242 (34%), Gaps = 15/242 (6%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           SV SG  +  L + +   G +     P+    +    +S + +++A  ++D      V+L
Sbjct: 26  SVSSGPTRYVLGMQELFRGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFD--KTASVFL 83

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++                +    +  +     ++   D+ + I+  D+++       NT 
Sbjct: 84  LEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIW--DVRTTKCIATVNTK 141

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
             NI+  +SPD   I       G +   V   +    +  ++++     +   W+   ++
Sbjct: 142 GENINICWSPDGQTIAV-----GNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNM 196

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             F         I    +    + +    SN     + P G+   +      D    L+ 
Sbjct: 197 F-FLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGK---YFATGSADALVSLWD 252

Query: 421 ID 422
           +D
Sbjct: 253 VD 254



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 29/230 (12%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R    S DQ+ + P  +P+     + T   +  +R++  D R  +    + N +   +
Sbjct: 94  NYRGHGDSVDQLCWHPS-NPD----LFVTASGDKTIRIW--DVRTTKCIATV-NTKGENI 145

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +G+   +  + D    I +   +S A E+     F     S++ D++       
Sbjct: 146 NICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ---FKFEVNEISWNNDNNMFFLT-- 200

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G   + ++        +      ++     + P G   A          + +   D  
Sbjct: 201 -NGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADA---LVSLWDVD-- 254

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDG------DTGSKLYSI 421
           +   +   S L  P    ++S  G+ L  + +         +TG KL+ +
Sbjct: 255 ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEV 304


>gi|326437240|gb|EGD82810.1| pre-mRNA-processing factor 17 [Salpingoeca sp. ATCC 50818]
          Length = 554

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 82/270 (30%), Gaps = 23/270 (8%)

Query: 162 IYQSITGEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRF 219
           I+      KG    R   VS  ++ S  +   + + +  G   +          + +  F
Sbjct: 256 IHTWPGHPKGVAAIRFFPVSAHLLLSAGMDGKIKLWEVYGQRRLIRTYHGHTAGVRDIAF 315

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS--NGKRALISVQ 277
           + +  +     YD      + L DT          N R +    +F    + +   ++  
Sbjct: 316 NNDGTRFLSCGYDK----LIRLWDTETGECLGHFTN-RHVPYCVKFHPSEDKQHLFVAGT 370

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D+ +  +  D  +    +     L    + ++  +  ++V  SD +   +++       
Sbjct: 371 SDKKIICW--DTNTGDIVQEYDRHLGAVNTITFVEEGRRMVTTSD-DKSMRVWEWDIPV- 426

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNL 392
           D K I+     S       P G  +       +    G   +     + + +        
Sbjct: 427 DIKYIADPSMHSMPSVAVHPNGKYMVAQSLDNQMLVFGARDRFRQNRKKIFKGHVIAGYA 486

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               +SP G  ++      GD    L   D
Sbjct: 487 CGVHFSPDGTYVV-----SGDAYGNLCIWD 511


>gi|301310898|ref|ZP_07216827.1| putative alanyl dipeptidyl peptidase [Bacteroides sp. 20_3]
 gi|300830961|gb|EFK61602.1| putative alanyl dipeptidyl peptidase [Bacteroides sp. 20_3]
          Length = 827

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 44/339 (12%), Positives = 100/339 (29%), Gaps = 72/339 (21%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFF----------------SSPASWR 152
             +VT  V  E        + L DV D K+I                         +S+ 
Sbjct: 168 DAVVTATVNPEK------RYTLSDVFDGKRIQSASLSPNGKLIIVSYQETYPGGKQSSFT 221

Query: 153 KIAHTIS-DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           +I    +   + ++    +    S + + +   + G    +L     D  + +    +  
Sbjct: 222 QILDKATGSVLVENGQCLRWMPKSNLAYYTRKGMKGTELVTL-----DPTSKKENILASQ 276

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-------------------- 251
                  F P +  + ++  +     R  + +  +    +                    
Sbjct: 277 LPEGSFSFGPTEDYLLFSIREKGPQERKEIQEILVPDDRQPGWRNRMFIHKYDLRTGLFQ 336

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLTNTLFIN 304
           R+    +       S +G   L S ++            IY +DL++   + L       
Sbjct: 337 RLTYGHTSTYINDVSQDGHYLLFSRREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFV 396

Query: 305 ISASYSPDSSQI-------VF----------ESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             A +SPD++Q+        F          ++      QL++        K +++D + 
Sbjct: 397 SRAVFSPDATQLLVDASGEAFDGIGLKIKEGQTSNTSDGQLFLYNIADKSIKPLTKDFDP 456

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           S     W+     I  T    ++  +  +     + + L
Sbjct: 457 SVDSYEWNALDKQIYITAKDKDRVRMYSLNPSNGKIKQL 495



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 48/283 (16%), Positives = 90/283 (31%), Gaps = 47/283 (16%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
           K  FN     V  + V+   + +L  +  DG  I+               SPN + +  +
Sbjct: 160 KASFNPEKDAVVTATVNPEKRYTLSDV-FDGKRIQSA-----------SLSPNGKLIIVS 207

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
             +     +       +D+A   +       L  R+      A  + +  +  ++ ++D 
Sbjct: 208 YQETYPGGKQSSFTQILDKATGSVLVENGQCL--RWMPKSNLAYYTRKGMKGTELVTLDP 265

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            S   E +  +     S S+ P    ++F S RE   Q         ++K I +      
Sbjct: 266 TSKK-ENILASQLPEGSFSFGPTEDYLLF-SIREKGPQ---------ERKEIQEILVPDD 314

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFS 407
             P W               +  I          + L     S       S  G  L+FS
Sbjct: 315 RQPGW-------------RNRMFIHKYDLRTGLFQRLTYGHTSTYINDV-SQDGHYLLFS 360

Query: 408 RKKDG-----DTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
           R++        + + +Y +DL     +TLI    + S   +  
Sbjct: 361 RREPNLTERPFSRTYIYKMDLRTMHVDTLIKGEKFVSRAVFSP 403


>gi|301772350|ref|XP_002921591.1| PREDICTED: TAF5-like RNA polymerase II p300/CBP-associated
           factor-associated factor 65 kDa subunit 5L-like
           [Ailuropoda melanoleuca]
 gi|281337304|gb|EFB12888.1| hypothetical protein PANDA_010502 [Ailuropoda melanoleuca]
          Length = 589

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 60/217 (27%), Gaps = 18/217 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDM----SIRYWDLGSFTNTVLYQGHAYPVWDLDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+      ++    + P+S+ +   S   
Sbjct: 393 SP--YSLYFASGSHDRTARLWSFDR--TYPLRIYAGHLADVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              L     N+ + T+SP    +  +   +      +
Sbjct: 503 YKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 438 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ----RLK 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 494 LWDLASGTLYKELRGHTDNITSLTFSPDSSLIA-SASMDNSVRVWDI 539


>gi|262203662|ref|YP_003274870.1| WD40 repeat, subgroup [Gordonia bronchialis DSM 43247]
 gi|262087009|gb|ACY22977.1| WD40 repeat, subgroup [Gordonia bronchialis DSM 43247]
          Length = 1301

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 51/338 (15%), Positives = 110/338 (32%), Gaps = 35/338 (10%)

Query: 113  TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTI---SDDIYQSITGE 169
            TG V +   DRL       D     ++   ++  S  + R+    +    D+++      
Sbjct: 963  TGAVYQIPADRLGTRILASDTTIDGRVT--QWAVSSGTMRRAGPDLLPPPDEVFSGAAVL 1020

Query: 170  KGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G    RI  +      G +  ++   D  D A  R L+    Q         +++    
Sbjct: 1021 SG--TGRIAVM------GTVSGAVVFADYTDPAAPRILSRVPAQSSLNETVDYSERS-GI 1071

Query: 229  ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--PRFSSNGKRALISVQKDEAMDIYS 286
            A     D+ +  ++D      P+ +G F +   A     S +G+R  ++     +  +  
Sbjct: 1072 AVTGATDLGKATVLDASDPSNPRVVGEFDAGDGAWWVSLSPDGRRVAVATV---SGAVLV 1128

Query: 287  VDLQSNATERLT----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
             DL + +T RL           +S  +    ++++  S+ +    + V            
Sbjct: 1129 YDLSTPSTPRLLGVVHRFETAALSVRFDASGTRLIAASENKRVAVVDVTDPRHPHTVAEM 1188

Query: 343  QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWS 398
                +  +   +S  G  +      G    + V     +  + +         +     +
Sbjct: 1189 SGPTSELYSAAFSSDGRRVV---AGGSNAEVWVWDIGDNGPKRVAVLRSFPGRVYDVRLT 1245

Query: 399  PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            P GR  +++  + G   S  + ID     + L   P  
Sbjct: 1246 PDGR--LYASGEGGVLRS--WEIDAARVMDELCARPGD 1279


>gi|218185050|gb|EEC67477.1| hypothetical protein OsI_34716 [Oryza sativa Indica Group]
          Length = 720

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 61/435 (14%), Positives = 131/435 (30%), Gaps = 62/435 (14%)

Query: 48  VSIAFTKFVSIDELGGKVSEVVSKD--LQRSDVFNLI----SQDSFKQKITNPDS-IPRF 100
           +      +   + L   +++  ++D  + R+  F  +    ++    + +         F
Sbjct: 160 MPAEIKPYTPGENLQKWLADEKARDQFVIRAGTFTEVYWNDARQKMPELVFQKQYWTDSF 219

Query: 101 QDWNSLGAQVLVT----GRVIKEGKDRLR-------VEFRLWDVKDRKQIIGKKFFSSPA 149
             W+ LG   L T    G  +  G D+          + +L D     +     + S   
Sbjct: 220 IQWSPLGT-YLATVHRQGSQVWGGDDKFERLMRFAHAQVKLID-FSPGEKYLVTYSSHEP 277

Query: 150 SWRKIAHTISDDIYQSITGE-----KGDFNSRILFVSESVVSGIIKNSLCVMDRD----- 199
           S  +  H +  +I+   TG+     KG  +      + SV             +D     
Sbjct: 278 SNPRDTHRVVLNIFDVRTGKVMRDFKGSADEFSASGNISVSGVSWPIFRWGGGKDDKYFA 337

Query: 200 --GANIRYLTPSRDQILFEPR-----------FSPNQQKVAYAT---YDDEDILRVYLMD 243
             G N+  +  +    L + +           +SP    +A             RV L+ 
Sbjct: 338 RLGKNVISVYETETFSLLDKKSLKVENVVDFCWSPTDPIIALFVPELGGGNQPARVSLVQ 397

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--------AMDIYSVDLQSNATE 295
                  ++   F        + ++G+   + V +            +++ +  +    E
Sbjct: 398 IPGKEELRQKNLFSVSDCKMYWQNSGEYLAVQVDRYTKTKKSTYTGFELFRIKERDIPIE 457

Query: 296 RLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSD----QKRISQDKEASY 349
            L      +  I+ ++ P   +         K  +       S+      +++  K    
Sbjct: 458 VLELDNKNDKIIAFAWEPKGHRFAVIHGDGPKPDISFYSMKTSNNISRVSKLTTLKGKQA 517

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFS 407
               WSP G  I F    G    +     D  +     E        W P+GR L    +
Sbjct: 518 NALFWSPGGRFIVFAGLKGFNGQLEFYNVDELETMATGEHFMATDIMWDPTGRYLASAVT 577

Query: 408 RKKDGDTGSKLYSID 422
              + + G +++S  
Sbjct: 578 SVHEMENGFQIWSFS 592



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 50/156 (32%), Gaps = 9/156 (5%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRID-RAPKRIGNFRSMILAPR 264
             +++  +    + P   + A    D     +  Y M T  +     ++   +       
Sbjct: 461 LDNKNDKIIAFAWEPKGHRFAVIHGDGPKPDISFYSMKTSNNISRVSKLTTLKGKQANAL 520

Query: 265 -FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--VFESD 321
            +S  G+  + +  K     +   ++        T   F+     + P    +     S 
Sbjct: 521 FWSPGGRFIVFAGLKGFNGQLEFYNVDE-LETMATGEHFMATDIMWDPTGRYLASAVTSV 579

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            E +    +   +G    ++S+D    +F  +W P+
Sbjct: 580 HEMENGFQIWSFSGKQLYKVSKDH---FFQFLWRPR 612


>gi|213857619|ref|ZP_03384590.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 331

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 72/235 (30%), Gaps = 18/235 (7%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 2   KQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 61

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPD-SSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
            Y +     A         +  S +  S D   + VF  S   G   + V +        
Sbjct: 62  AYRIAPDDGALT-FAAESALPGSPTHISTDHHGRFVFVGSYNAGN--VSVTRLQDGLPVE 118

Query: 341 ISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNL 392
           +    E          +P    +       ++  +  +  DG        E   VE +  
Sbjct: 119 LVDVVEGLDGCHSANITPDNRTLWVPALKQDRICLFTLSDDGHLVAQEPAEVNTVEGAGP 178

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
           +   + P+ R   +   +   +       + +G  E   TL   PA  SD +W  
Sbjct: 179 RHMVFHPN-RQYAYCVNELNSSVDVWQLKNPHGEIECVQTLDMMPADFSDTRWAA 232


>gi|182413357|ref|YP_001818423.1| hypothetical protein Oter_1539 [Opitutus terrae PB90-1]
 gi|177840571|gb|ACB74823.1| hypothetical protein Oter_1539 [Opitutus terrae PB90-1]
          Length = 471

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 77/244 (31%), Gaps = 35/244 (14%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             L +   DG     L P R   +    +  + Q++  A    E            D   
Sbjct: 50  RELMLCAADGQ----LLPPRVAAVSRVAWLGDSQRLVLARRHTEATWSGLAAAMSPDEVR 105

Query: 251 KRIGN----FRSMILAPRFSSNGKRALISVQKDEAMD---IYSVDLQSNATE-RLTNTLF 302
           + +      ++ +     +S  G  A +   +D       IY  D +      +LT   +
Sbjct: 106 EIVARAEIAWQKLQSGAGWSRLGGAAGLFSDQDPMGKFVGIYLRDQRGQTLRPQLTADEW 165

Query: 303 INISASYSPDSSQIV----FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            ++S        Q          R  +EQ+ +  +     + I         +   SP  
Sbjct: 166 DDLS-------RQTAEVHELTVARIEREQIVLGPTLSRGIEEI--------IEIRVSPGD 210

Query: 359 DLIAFTK----FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             +AF         ++  + +   DG+    LV +     P W+  GRSL++ +     +
Sbjct: 211 RAVAFVSEAALTKPKESRLRIALLDGNAPAQLVSERVAAQPDWTTDGRSLVYFQAAGAAS 270

Query: 415 GSKL 418
              L
Sbjct: 271 NDDL 274


>gi|149758059|ref|XP_001497633.1| PREDICTED: similar to TAF5-like RNA polymerase II
           p300/CBP-associated factor-associated factor 65 kDa
           subunit 5L (PCAF-associated factor 65 beta) (PAF65-beta)
           [Equus caballus]
          Length = 589

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 60/217 (27%), Gaps = 18/217 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDM----SIRYWDLGSFTNTVLYQGHAYPVWDLDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+      ++    + P+S+ +   S   
Sbjct: 393 SP--YSLYFASGSHDRTARLWSFDR--TYPLRIYAGHLADVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              L     N+ + T+SP    +  +   +      +
Sbjct: 503 YKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 438 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ----RLK 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 494 LWDLASGTLYKELRGHTDNITSLTFSPDSSLIA-SASMDNSVRVWDI 539


>gi|115483552|ref|NP_001065446.1| Os10g0569200 [Oryza sativa Japonica Group]
 gi|19224988|gb|AAL86464.1|AC077693_3 putative eukaryotic initiation factor subunit [Oryza sativa
           Japonica Group]
 gi|31433598|gb|AAP55090.1| Eukaryotic translation initiation factor 3 subunit 9, putative,
           expressed [Oryza sativa Japonica Group]
 gi|113639978|dbj|BAF27283.1| Os10g0569200 [Oryza sativa Japonica Group]
 gi|215695511|dbj|BAG90702.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 719

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 61/435 (14%), Positives = 131/435 (30%), Gaps = 62/435 (14%)

Query: 48  VSIAFTKFVSIDELGGKVSEVVSKD--LQRSDVFNLI----SQDSFKQKITNPDS-IPRF 100
           +      +   + L   +++  ++D  + R+  F  +    ++    + +         F
Sbjct: 160 MPAEIKPYTPGENLQKWLADEKARDQFVIRAGTFTEVYWNDARQKMPELVFQKQYWTDSF 219

Query: 101 QDWNSLGAQVLVT----GRVIKEGKDRLR-------VEFRLWDVKDRKQIIGKKFFSSPA 149
             W+ LG   L T    G  +  G D+          + +L D     +     + S   
Sbjct: 220 IQWSPLGT-YLATVHRQGSQVWGGDDKFERLMRFAHAQVKLID-FSPGEKYLVTYSSHEP 277

Query: 150 SWRKIAHTISDDIYQSITGE-----KGDFNSRILFVSESVVSGIIKNSLCVMDRD----- 199
           S  +  H +  +I+   TG+     KG  +      + SV             +D     
Sbjct: 278 SNPRDTHRVVLNIFDVRTGKVMRDFKGSADEFSASGNISVSGVSWPIFRWGGGKDDKYFA 337

Query: 200 --GANIRYLTPSRDQILFEPR-----------FSPNQQKVAYAT---YDDEDILRVYLMD 243
             G N+  +  +    L + +           +SP    +A             RV L+ 
Sbjct: 338 RLGKNVISVYETETFSLLDKKSLKVENVVDFCWSPTDPIIALFVPELGGGNQPARVSLVQ 397

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE--------AMDIYSVDLQSNATE 295
                  ++   F        + ++G+   + V +            +++ +  +    E
Sbjct: 398 IPGKEELRQKNLFSVSDCKMYWQNSGEYLAVQVDRYTKTKKSTYTGFELFRIKERDIPIE 457

Query: 296 RLTNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSD----QKRISQDKEASY 349
            L      +  I+ ++ P   +         K  +       S+      +++  K    
Sbjct: 458 VLELDNKNDKIIAFAWEPKGHRFAVIHGDGPKPDISFYSMKTSNNISRVSKLTTLKGKQA 517

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFS 407
               WSP G  I F    G    +     D  +     E        W P+GR L    +
Sbjct: 518 NALFWSPGGRFIVFAGLKGFNGQLEFYNVDELETMATGEHFMATDIMWDPTGRYLASAVT 577

Query: 408 RKKDGDTGSKLYSID 422
              + + G +++S  
Sbjct: 578 SVHEMENGFQIWSFS 592



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 20/156 (12%), Positives = 50/156 (32%), Gaps = 9/156 (5%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDI-LRVYLMDTRID-RAPKRIGNFRSMILAPR 264
             +++  +    + P   + A    D     +  Y M T  +     ++   +       
Sbjct: 461 LDNKNDKIIAFAWEPKGHRFAVIHGDGPKPDISFYSMKTSNNISRVSKLTTLKGKQANAL 520

Query: 265 -FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--VFESD 321
            +S  G+  + +  K     +   ++        T   F+     + P    +     S 
Sbjct: 521 FWSPGGRFIVFAGLKGFNGQLEFYNVDE-LETMATGEHFMATDIMWDPTGRYLASAVTSV 579

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            E +    +   +G    ++S+D    +F  +W P+
Sbjct: 580 HEMENGFQIWSFSGKQLYKVSKDH---FFQFLWRPR 612


>gi|298374663|ref|ZP_06984621.1| Xaa-Pro dipeptidyl-peptidase [Bacteroides sp. 3_1_19]
 gi|298269031|gb|EFI10686.1| Xaa-Pro dipeptidyl-peptidase [Bacteroides sp. 3_1_19]
          Length = 804

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/271 (13%), Positives = 83/271 (30%), Gaps = 26/271 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   K+    M R   N   L   + + +    +SP+ +  A    D   +  ++++++ 
Sbjct: 204 TDGEKDFGFGMPRTFLNTDTLCDHKRKYVMG-NWSPDGRYFAATLSDQRAVQDLWVINSI 262

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--------LQSNATERL 297
               P  +  ++  +     S      L  ++         VD        L S   +  
Sbjct: 263 AKPRPT-LETYKYQMPGETGSPIVHLYLFDLENTGKRKEIRVDCFKDQTINLASKPDKER 321

Query: 298 TNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP--- 352
           T    +  ++ +  D+        S    +  +          K I +++  +  +    
Sbjct: 322 T---GLTRNSIWLGDNQTFYLTRVSRDMKRVDICSYTIGEDSVKAIIEERLNTSMETRPL 378

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG--RSLIFSRK- 409
             +  G  +           + +    G+ +  + +               R + F    
Sbjct: 379 AMTDNGKELIHWSERDGWAHLYLYDAQGNLKNRITKGPWHVDAIVDVDSKNRVVYFKANA 438

Query: 410 -KDGDTGS---KLYSIDLNGRNETLINTPAY 436
            + GDT      LY ++L+G    LI TP  
Sbjct: 439 REKGDTTPYYEHLYRVNLDGSGLKLI-TPGD 468



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 22/178 (12%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESDREGKEQ 327
           +    S++       +S D  S+   R+T          A+ SPD  ++VF  D      
Sbjct: 121 RTFTFSIKGTNGNYFFSYDYPSSRLTRITKDEIPAKIRWANISPDKKRVVFAKD----LN 176

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           LYVM     + K +   ++ +  +   +  G+           F  G+ +   + + L  
Sbjct: 177 LYVMSYEDYE-KAVKDPEDKTISEIALTTDGEK---------DFGFGMPRTFLNTDTLCD 226

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-----PAYASDP 440
                    WSP GR    +   D      L+ I+   +    + T     P     P
Sbjct: 227 HKRKYVMGNWSPDGRYFA-ATLSDQRAVQDLWVINSIAKPRPTLETYKYQMPGETGSP 283



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 71/233 (30%), Gaps = 38/233 (16%)

Query: 150 SWRKIAHTISD-------DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
             R  A T+SD        +  SI   +    +    +     S I+   L  ++  G  
Sbjct: 239 DGRYFAATLSDQRAVQDLWVINSIAKPRPTLETYKYQMPGETGSPIVHLYLFDLENTGKR 298

Query: 203 IRYLTP---------------SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                                 R  +     +  + Q   Y T    D+ RV +    I 
Sbjct: 299 KEIRVDCFKDQTINLASKPDKERTGLTRNSIWLGDNQT-FYLTRVSRDMKRVDICSYTIG 357

Query: 248 RAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
               +      +  +          NGK  +   ++D    +Y  D Q N   R+T    
Sbjct: 358 EDSVKAIIEERLNTSMETRPLAMTDNGKELIHWSERDGWAHLYLYDAQGNLKNRITKGP- 416

Query: 303 INISASYSPDSSQIV--FESDREGK-------EQLYVMQSNGSDQKRISQDKE 346
            ++ A    DS   V  F+++   K       E LY +  +GS  K I+    
Sbjct: 417 WHVDAIVDVDSKNRVVYFKANAREKGDTTPYYEHLYRVNLDGSGLKLITPGDY 469


>gi|239614139|gb|EEQ91126.1| WD repeat protein [Ajellomyces dermatitidis ER-3]
          Length = 671

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 47/254 (18%), Positives = 84/254 (33%), Gaps = 37/254 (14%)

Query: 197 DRDGANIRYLTPSRDQILFEPRF-SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           D  G  I  +  SR      P+  S   +K+ Y+      +  V  +  R +R   R+  
Sbjct: 134 DVYGGPIYRMHGSRSGEHLLPKIPSDAGRKLMYSGDFGSHLNYVDKIKRRKERLATRL-M 192

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           +R +   PR      RA+  V+     D+    + ++  +++ +      S S+S D + 
Sbjct: 193 WRELANGPRLRP---RAISQVRITNGQDL----IPNSKADKIIHYNSRCYSGSFSDDGNF 245

Query: 316 IVFESDREGKEQLYVMQSNGSDQ-------KRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             F S     +   V   + S+               + +  D   SP    +A++    
Sbjct: 246 --FFSC---AQDFKVRMYDTSNPLEWRWYKTVEYPFGQWTLTDASLSPDNRYLAYSSIRN 300

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP-----------TWSPSGRSLIFSRKKDGDTGSK 417
                G      S+  LL   S   +P            +S  GR LI      G +   
Sbjct: 301 IVCLAGTDPSSDSEPTLLNFASRYGSPLSGSDFGIWSIRFSGDGRELI-----AGTSSQS 355

Query: 418 LYSIDLNGRNETLI 431
           +   D+  R   L 
Sbjct: 356 VIVYDIESRTPILT 369


>gi|182411829|ref|YP_001816895.1| peptidase S9 prolyl oligopeptidase [Opitutus terrae PB90-1]
 gi|177839043|gb|ACB73295.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Opitutus terrae PB90-1]
          Length = 665

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 8/89 (8%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-------WSPQGD 359
           A  SPD   + F  +  G+ +L+V++ +     RI   + A             W     
Sbjct: 38  ARLSPDGKHLAFLREHNGRTKLHVLEIDADKIYRIDVGEAALASGARKDVDAAEWVGDRR 97

Query: 360 LIAFTKFSGE-KFAIGVMKKDGSQERLLV 387
           L+ +T      ++ I  M  DGSQ R + 
Sbjct: 98  LLVYTSVWDRFRYGIAAMNLDGSQVRAIS 126



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/179 (11%), Positives = 63/179 (35%), Gaps = 30/179 (16%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-------NISAS-YSPDSSQ 315
           R S +GK      + +    ++ +++ ++   R+             ++ A+ +  D   
Sbjct: 39  RLSPDGKHLAFLREHNGRTKLHVLEIDADKIYRIDVGEAALASGARKDVDAAEWVGDRRL 98

Query: 316 IVFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI----AFTKFSGEK 370
           +V+ S  +  +  +  M  +GS  + IS  ++ + +      +G  +       +F  + 
Sbjct: 99  LVYTSVWDRFRYGIAAMNLDGSQVRAISGAEDETEYLH----EGMRLYADEVIHRFEDKD 154

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
             + ++ +  ++            P      +  G    +S +         + +D +G
Sbjct: 155 HHVLMLDRHHNRP------GRADRPDVIKMCASDGS---YSVEVKNPGNVSRWGVDADG 204


>gi|49619007|gb|AAT68088.1| FLJ11294-like [Danio rerio]
          Length = 557

 Score = 45.8 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 66/195 (33%), Gaps = 11/195 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R++P  +++       E      L +         +    S++ A  +S N    +++  
Sbjct: 126 RWTPEGRRLVTGASSGEFT----LWNGLTFNFETILQAHDSLVRAMTWSHN-YMWMLTAD 180

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               +  +  ++ +    +          AS+SP  ++    SD +G  +++        
Sbjct: 181 HGGYVKYWQSNMNNVKMFQ--AHKEAIREASFSPTDNKFATCSD-DGTVRIW--DFLRCH 235

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPT 396
           ++RI +   A      W P   L+       ++       K G     L    + +    
Sbjct: 236 EERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVK 295

Query: 397 WSPSGRSLIFSRKKD 411
           W+ +G  L+ + +  
Sbjct: 296 WNLNGNWLLTASRDH 310


>gi|326426463|gb|EGD72033.1| hypothetical protein PTSG_00050 [Salpingoeca sp. ATCC 50818]
          Length = 445

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 71/196 (36%), Gaps = 9/196 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + Q +  A +    ++ ++ +D        RI    + + + R+S +G+  L + Q 
Sbjct: 57  WSSDSQYLITANF-QRALVEIWALDDVEWEC--RIDEGAAGLESVRWSPDGRHVLTTAQF 113

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + I+S+  Q     +        +   ++ +   +      EG++ + ++       
Sbjct: 114 QLRVTIWSLVAQQTHYFKFPKFAGKGLG--FTSNGKFMAVLERSEGRDFVSIITCESWQV 171

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN---LQAP 395
            R  Q + +   D  WSP    +     S   +   V    G   R     S+   +++ 
Sbjct: 172 VRRFQTETSDATDLTWSPDDHHLC-IWDSPLTYTACVYSISGKLLRTFSAYSDALGIKSV 230

Query: 396 TWSPSGRSLIFSRKKD 411
            W+PS + L       
Sbjct: 231 AWAPSSQLLAIGSYDQ 246



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 49/154 (31%), Gaps = 11/154 (7%)

Query: 218 RFSPNQQKVAYATYDDED--ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           R+SP+ + V           I  +    T   + PK  G          F+SNGK   + 
Sbjct: 99  RWSPDGRHVLTTAQFQLRVTIWSLVAQQTHYFKFPKFAGKGLG------FTSNGKFMAVL 152

Query: 276 VQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            + +    +  +  +S     R           ++SPD   +    D        V   +
Sbjct: 153 ERSEGRDFVSIITCESWQVVRRFQTETSDATDLTWSPDDHHLC-IWDSPLTYTACVYSIS 211

Query: 335 GSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFS 367
           G   +  S   +A       W+P   L+A   + 
Sbjct: 212 GKLLRTFSAYSDALGIKSVAWAPSSQLLAIGSYD 245


>gi|313216731|emb|CBY37984.1| unnamed protein product [Oikopleura dioica]
          Length = 304

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 76/263 (28%), Gaps = 29/263 (11%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR---- 218
           Y  +  E+      I  V+ +         +     DG  ++      + ++ E      
Sbjct: 5   YAILHKEESAHKEGIWCVAWATNPEDASERIVTGGADG-VVKSWKWQNNMVVLEHAMTGH 63

Query: 219 ------FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
                  + N +K A    D      + L D    +    I    S + +  FS +G + 
Sbjct: 64  NLGIVGITANGKKAASVGMDA----TIRLWDLENAQELAVIEGSPSDMWSICFSPDGTKI 119

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGKEQLY 329
                     D+   D ++    +  +        +S +YSPD + +      +G   + 
Sbjct: 120 ATGAT---GADVKIYDAETCEEIQTVSAGGKCPFVLSLAYSPDGTLLA-IGGMDG--IIT 173

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-- 387
           +  ++  D   + +          +S     +      G    I V           +  
Sbjct: 174 IFSTDNYDTFNVIEGHAMPIRSIAFSSDSQFMMSASDDG---HIKVYDASHKNLVGTLSG 230

Query: 388 EDSNLQAPTWSPSGRSLIFSRKK 410
               + +  + P   ++  S  K
Sbjct: 231 HSGWVLSVAFGPDNTAVSCSADK 253


>gi|302404403|ref|XP_003000039.1| eukaryotic translation initiation factor 2A [Verticillium
           albo-atrum VaMs.102]
 gi|261361221|gb|EEY23649.1| eukaryotic translation initiation factor 2A [Verticillium
           albo-atrum VaMs.102]
          Length = 478

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 69/218 (31%), Gaps = 21/218 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQK 278
           S N     + +        V +        P  +   F+   +  ++++ G   L+  Q 
Sbjct: 134 SNNHSVAVFISERKGQPAAVKVYSVPQFAQPISQKTFFKGDKVQLKWNNKGTSLLVLAQT 193

Query: 279 D---------EAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI-VFESDREGKEQ 327
           D             +Y + +  +   R+  +        ++SP+S +  V       K  
Sbjct: 194 DVDKSNKSYYGETTLYLLSVNGSFDARVPLDKEGPIHDVTWSPNSKEFGVIYGYMPAKSV 253

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           ++  ++  +    +           ++SP G       F      I V   +    ++  
Sbjct: 254 IFNHRAVPTHSFPL-----GPRNTIIFSPTGRFALLAGFGNLAGQIDVYDLEKDFRKVTT 308

Query: 388 -EDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
            E  N     WSP  R ++ +        D G KL+ +
Sbjct: 309 IESGNPSICVWSPDSRYILTATTSPRLRVDNGVKLWHV 346



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 68/180 (37%), Gaps = 11/180 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +S  S   + +L ++  +G+    +   ++  + +  +SPN ++     Y       V
Sbjct: 195 VDKSNKSYYGETTLYLLSVNGSFDARVPLDKEGPIHDVTWSPNSKEFG-VIYGYMPAKSV 253

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                 +      +G   ++I    FS  G+ AL++   + A  I   DL+     ++T 
Sbjct: 254 IFNHRAVPTHSFPLGPRNTII----FSPTGRFALLAGFGNLAGQIDVYDLE-KDFRKVTT 308

Query: 300 TLFINIS-ASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
               N S   +SPDS  I     S R   +    +   G     +  +     ++ +W P
Sbjct: 309 IESGNPSICVWSPDSRYILTATTSPRLRVDNGVKLWHVGGSI--MYNEDMTELYNVLWRP 366


>gi|291299776|ref|YP_003511054.1| hypothetical protein Snas_2272 [Stackebrandtia nassauensis DSM
           44728]
 gi|290568996|gb|ADD41961.1| hypothetical protein Snas_2272 [Stackebrandtia nassauensis DSM
           44728]
          Length = 348

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 59/159 (37%), Gaps = 12/159 (7%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP--K 251
             +  DG N+       +    +   S + +  A+       ++      T   + P  K
Sbjct: 93  YTIVEDGENV------GNPWAKDSTISHDGKMAAWLEESSGFLIADDAEGTVYGQFPPGK 146

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
           +     +  + P +S    + L +V+ D       + ++  +T  LT +   +   +  +
Sbjct: 147 KDLGVDNPCVRPTWSPIDDQLLYAVEIDGDATKLQIQIRDVSTSELTASFPADGACNFRW 206

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           + D + +V +   +G   +  M  +GS +   S + + +
Sbjct: 207 AADGTGLVAQKGYQG--DMVAMDVDGSGRNEFSVESQGA 243



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 43/129 (33%), Gaps = 12/129 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-----EASYFDPVWSP-QGDLI 361
           + S D     +  +  G   L    + G+   +    K     +     P WSP    L+
Sbjct: 111 TISHDGKMAAWLEESSGF--LIADDAEGTVYGQFPPGKKDLGVDNPCVRPTWSPIDDQLL 168

Query: 362 AFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
              +  G+  K  I +     S+              W+  G  L+  +   GD  +   
Sbjct: 169 YAVEIDGDATKLQIQIRDVSTSELTASFPADGACNFRWAADGTGLVAQKGYQGDMVA--M 226

Query: 420 SIDLNGRNE 428
            +D +GRNE
Sbjct: 227 DVDGSGRNE 235


>gi|227819198|ref|YP_002823169.1| adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234]
 gi|227338197|gb|ACP22416.1| probable adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii
           NGR234]
          Length = 743

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 52/123 (42%), Gaps = 9/123 (7%)

Query: 50  IAFTKFVSIDELGGK------VSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW 103
           IA   F+++     +      +++ +  DL R    +++S++S       P  +   +  
Sbjct: 240 IAVLPFLNLSGDPDQDYFTDGITDNLITDLARLSDLDVVSRNSVFAYKGKPVVLADIE-- 297

Query: 104 NSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIY 163
             LG + +V G V + G D++RV  +L D      +   +F    A    +   +S  I 
Sbjct: 298 RDLGVRFVVEGSVQRTG-DQIRVNAQLIDAASGDHLWANRFGRGGADVFAVQDELSRQIA 356

Query: 164 QSI 166
           +++
Sbjct: 357 EAL 359


>gi|226349746|ref|YP_002776860.1| hypothetical protein ROP_pROB01-05090 [Rhodococcus opacus B4]
 gi|226245661|dbj|BAH56008.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 369

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/158 (12%), Positives = 44/158 (27%), Gaps = 6/158 (3%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAM-DIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            +      S +G RA ++   D A   +  +D  +             +  + SP+   +
Sbjct: 55  GLAEGIAISPDGSRAYVTHGDDGAAGQLSVIDTATKTVLNTLAVGNFPVGVTVSPNGQTV 114

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              S+  G + + V+ +            +        +P G  +           I + 
Sbjct: 115 YAGSN--GDDTVSVIDTTTFAVTATIPVGDGPLGV-TITPDGTKVLVASQFDGHLTI-ID 170

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
               +    L           SP  R+  +     G+ 
Sbjct: 171 TATNTVSSTLALGGTTMFLAVSPDSRT-AYVTDSSGNA 207



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 62/185 (33%), Gaps = 16/185 (8%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR--APKRIGNFRSMILAPRFSSN 268
           + +      SP+  +      DD    ++ ++DT          +GNF    +    S N
Sbjct: 54  NGLAEGIAISPDGSRAYVTHGDDGAAGQLSVIDTATKTVLNTLAVGNFP---VGVTVSPN 110

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGK 325
           G+        D+     +V +    T  +T T+ +       + +PD ++++  S  +G 
Sbjct: 111 GQTVYAGSNGDD-----TVSVIDTTTFAVTATIPVGDGPLGVTITPDGTKVLVASQFDG- 164

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             L ++ +  +           + F    SP       T  SG    +  +       R+
Sbjct: 165 -HLTIIDTATNTVSSTLALGGTTMFL-AVSPDSRTAYVTDSSGNAIDVVDIPTAAVTARI 222

Query: 386 LVEDS 390
               S
Sbjct: 223 PASGS 227


>gi|195120798|ref|XP_002004908.1| GI19340 [Drosophila mojavensis]
 gi|193909976|gb|EDW08843.1| GI19340 [Drosophila mojavensis]
          Length = 797

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 13/120 (10%)

Query: 222 NQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           + Q +A      + +  ++ L +T   +  +++   +  +   RFS +G+  L SV +D 
Sbjct: 567 DGQLLASTCRASNAEHAQIILWNTSNWKQLQKLPGHQLTVTQLRFSPDGRYLL-SVSRDR 625

Query: 281 AMDIYSV-----DLQSNATERLTNTLF-----INISASYSPDSSQIVFESDREGKEQLYV 330
              +Y        L S      T+        I  S  +S D    V  S REGK   + 
Sbjct: 626 RWFLYERQQTDEPLDSYVPVANTDNSNGVHTRIIWSCDWSHDGKYFV-TSSREGKVVAWT 684


>gi|149923917|ref|ZP_01912304.1| serine/threonine protein kinase [Plesiocystis pacifica SIR-1]
 gi|149815205|gb|EDM74753.1| serine/threonine protein kinase [Plesiocystis pacifica SIR-1]
          Length = 802

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 70/200 (35%), Gaps = 21/200 (10%)

Query: 41  NSANYSPVSIAFTKFVSIDE-------LGGKVSEVVS--KDLQRSDVFNLISQDSFKQKI 91
                  +++   +F    +       LG ++ +V+S  + L+ S             + 
Sbjct: 329 TVPRGRALAVLPFRFRGPSDQAYIAEGLGDELIDVLSTMRGLRVSG-------SGATARF 381

Query: 92  TNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
              +          LG  VLV G +   G  R+R+  RL DV    Q+  +++  +    
Sbjct: 382 GEGNDRDPRSVGTELGVDVLVDGTMQLSGS-RVRISARLLDVSSGFQLWSERYDGTLEDV 440

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC-VMDRDGANIRYLTPSR 210
             +  T+   I +++  E  D   R    +E++ + +    L    D  G         R
Sbjct: 441 FALQDTMGKRIAEALRLELEDIAHRGGAPAEAIEAYLRARRLARTWDWKGPEGAVALYDR 500

Query: 211 DQILFEPRFSP--NQQKVAY 228
             I   P F P    + +AY
Sbjct: 501 C-IELAPEFKPALAGRAIAY 519


>gi|114569349|ref|YP_756029.1| hypothetical protein Mmar10_0798 [Maricaulis maris MCS10]
 gi|114339811|gb|ABI65091.1| conserved hypothetical protein [Maricaulis maris MCS10]
          Length = 323

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/121 (11%), Positives = 36/121 (29%), Gaps = 10/121 (8%)

Query: 266 SSNGKRA-LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           S  G    L ++       +    L      R       +    ++ +   +    D  G
Sbjct: 52  SPPGTDIYLFALDWSGEAPVLGASL--GGVTR----PGYDNQPFFTDNGGLLYTADDETG 105

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF--AIGVMKKDGSQ 382
           +  ++ +     +   ++Q    S + P  +P G  +++       +     +   D S 
Sbjct: 106 ETDIWHLDLASGETMPVTQTPGESEYSPRIAPDGR-LSYIYQPPGGYAGNAYLANPDNSD 164

Query: 383 E 383
            
Sbjct: 165 R 165


>gi|332024900|gb|EGI65088.1| Tubby-related protein 4 [Acromyrmex echinatior]
          Length = 1349

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 45/124 (36%), Gaps = 7/124 (5%)

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           D  G   +++ + +G     +  D+        WS  G  +A   +      +G +    
Sbjct: 74  DSSGVIFVWI-KYDGRWSIELINDRNTPVTHFSWSHDGR-MALICYRDGFVLVGSVAGQR 131

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
               +L + + +    W+P  + + F     G T  +L  +D++G   + +   A  +  
Sbjct: 132 YWSSMLNDKATITCGIWTPDDQQVYF-----GTTAGQLIVMDVHGAMVSEVQLAAGVTSM 186

Query: 441 QWVG 444
            W  
Sbjct: 187 AWSA 190



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 57/166 (34%), Gaps = 24/166 (14%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   V +     +    + L++ R       + +F        +S +G+ ALI   +D  
Sbjct: 74  DSSGVIFVWIKYDGRWSIELINDRNTP----VTHF-------SWSHDGRMALICY-RDGF 121

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + + SV         + N         ++PD  Q+ F +      QL VM  +G+    +
Sbjct: 122 VLVGSV-AGQRYWSSMLNDKATITCGIWTPDDQQVYFGTTAG---QLIVMDVHGAMVSEV 177

Query: 342 SQDKEASYFDPVWSPQGDLIA------FTKFSGEKFAIGVMKKDGS 381
                A      WS +   +        ++     + + V   DG+
Sbjct: 178 QLA--AGVTSMAWSAEKFTMEEDETCDRSQKDDRNYVLAVCLADGN 221



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 14/117 (11%), Positives = 37/117 (31%), Gaps = 12/117 (10%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +  DG     L   R+  +    +S + +       D      V +      R    + N
Sbjct: 83  IKYDGRWSIELINDRNTPVTHFSWSHDGRMALICYRDG----FVLVGSVAGQRYWSSMLN 138

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISASYS 310
            ++ I    ++ + ++            +  +D+     +  +L   +    S ++S
Sbjct: 139 DKATITCGIWTPDDQQVYFGTTAG---QLIVMDVHGAMVSEVQLAAGV---TSMAWS 189


>gi|326491885|dbj|BAJ98167.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 332

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/264 (13%), Positives = 77/264 (29%), Gaps = 34/264 (12%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                 E RLWD+     +  ++F         +A +I               ++R +  
Sbjct: 90  SGSWDGELRLWDLSTG--VTTRRFVGHEKDVLSVAFSI---------------DNRQIVS 132

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +    +  + N+L                    +   RFSPN       +   +  ++V+
Sbjct: 133 ASRDRTIKLWNTLGECKYTIGGDLGGGEGHTGWVSCVRFSPNNFAPTIVSGSWDRSVKVW 192

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +     R    +      + A   S +G     S  KD    ++ +  +      L   
Sbjct: 193 NLTNCKLRCT--LDGHGGYVSAVAVSPDGSLCA-SGGKDGVTLLWDL-TEGKRLYSLDAG 248

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-------ISQDKEASYFDPV 353
             IN S  +SP+   +   +     + + +         +       +S  +        
Sbjct: 249 SIIN-SLCFSPNRYWLCAATQ----DSIKIWDLESKHIVQDLRPEVPVSSKQMLYCTCLS 303

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMK 377
           WS  G  + +  ++     I  + 
Sbjct: 304 WSADGSTL-YAGYTDGTIRIYKIS 326


>gi|322794490|gb|EFZ17543.1| hypothetical protein SINV_01625 [Solenopsis invicta]
          Length = 805

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/151 (14%), Positives = 48/151 (31%), Gaps = 8/151 (5%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
            + +    +F+P+  ++     D +     Y          +  G+    +     S +G
Sbjct: 544 GNTMFMMAQFTPDGIQILTCGTDRK---IAYWETLDGSLVREIEGSSAGTMNCLDISPDG 600

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQL 328
           +R  I+   D  +  +  D  S     + T    I  +  +S D   IV  +  +G   +
Sbjct: 601 RR-FITGSNDCTVKSWEYD--SADVTHISTFHAAIITACKFSTDGKHIV-TASADGTIMI 656

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +   S   +  +       +       P  D
Sbjct: 657 WKYPSETLEDSKSVDRSGRAANSIRSMPDED 687


>gi|307187770|gb|EFN72742.1| WD repeat-containing protein 82 [Camponotus floridanus]
          Length = 315

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 17/158 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           + ++ +SG +  SL + D    N   +      +   P  + + + + +A   + + +++
Sbjct: 118 IEDTFLSGSLDKSLRLWDLRSPNCHGVMN----VSGRPVAAYDPEGLIFAAGVNSESIKL 173

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           Y +   D       K            +FS +GK  LIS        I  +D       +
Sbjct: 174 YDLRSFDKGPFVTFKLSQEKECDWTGLKFSRDGKTILISTN---GSTIRLIDAFHGTPLQ 230

Query: 297 LT-----NTLFINISASYSPDSSQIVFESDREGKEQLY 329
            T     N   I I AS+SPD SQ VF    +G+  ++
Sbjct: 231 -TFAGYLNNKGIAIEASFSPD-SQFVFSGSTDGRVHVW 266


>gi|291243557|ref|XP_002741668.1| PREDICTED: Ahi1 protein-like [Saccoglossus kowalevskii]
          Length = 1127

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 12/156 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDRE 323
           FS +G+          +  IY  ++ S      L     I     +S D+ Q +  +  +
Sbjct: 486 FSHDGRSLACGGSDKASYPIYIYEIPSGRLRGELPGHYSIIYDLCWS-DNDQEILSASSD 544

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           G  +++  +S G+   RI     A  +   + PQ + I  T   G    I V  K  +Q 
Sbjct: 545 GTARIWDTESVGATAIRI-FPHPAYVYTAQYHPQSENIVVT--GGFDHVIRVWNKKSAQV 601

Query: 384 R------LLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                  L+     +    +S  G  L +S    G 
Sbjct: 602 HGELLHELIGHKGYINCLCFSHEGDKL-YSADSVGS 636


>gi|156365920|ref|XP_001626890.1| predicted protein [Nematostella vectensis]
 gi|156213782|gb|EDO34790.1| predicted protein [Nematostella vectensis]
          Length = 322

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 71/244 (29%), Gaps = 57/244 (23%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-- 264
             + +  +    +S + +++A  ++D    + V   D            ++    +    
Sbjct: 25  FTAHNSKVHSVSWSCDGRRLASGSFDRTASVFVLDKDRLTLDHI-----YKGHNESVDQL 79

Query: 265 -FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV------ 317
            +  +     ++   D+ + I+  D +S     + NT   NI+  +SPD + I       
Sbjct: 80  CWHPSNPDLFVTASGDKTIRIW--DARSIKCVHVVNTKGENINICWSPDGNTIAVGNKDD 137

Query: 318 ---FESDRE-----------------------------GKEQLYVMQSNGSDQKRISQDK 345
              F   R                              G   + ++       ++     
Sbjct: 138 LITFVDTRTYKSKHDEQFKFEVNEISWNNTNDLFFLTNGHGCINILSYPDLKPQQTLHAH 197

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSG 401
            A+     + P G   A          + +   D  +   +   S L  P    ++S  G
Sbjct: 198 PANCICIKFDPMGRYFATGSADA---LVSLWDLD--ELVCVRTFSRLDWPVRTLSFSHDG 252

Query: 402 RSLI 405
           R L 
Sbjct: 253 RMLA 256



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 44/129 (34%), Gaps = 17/129 (13%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-------N 299
           +   K      S + +  +S +G+R   S   D    ++ +D       RLT       +
Sbjct: 19  NTKTKDFTAHNSKVHSVSWSCDGRRLA-SGSFDRTASVFVLDKD-----RLTLDHIYKGH 72

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              ++    + P +  +   +   G + + +  +       +  + +    +  WSP G+
Sbjct: 73  NESVD-QLCWHPSNPDLFVTA--SGDKTIRIWDARSIKCVHVV-NTKGENINICWSPDGN 128

Query: 360 LIAFTKFSG 368
            IA      
Sbjct: 129 TIAVGNKDD 137


>gi|123500475|ref|XP_001327870.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121910805|gb|EAY15647.1| hypothetical protein TVAG_209260 [Trichomonas vaginalis G3]
          Length = 322

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 77/202 (38%), Gaps = 17/202 (8%)

Query: 243 DTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTN 299
           D ++   P        M +    +S +G +   S   +E +    ++ +   T +  +T+
Sbjct: 6   DLKLISEPAWTAETPGMTVGCIAYSPDGSQVAFSSSPNEMVVKNVINGEDVQTLQQSVTS 65

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              I  S  + P     +F   ++G   +++     ++  + S+   ++       P G+
Sbjct: 66  HPLI--SCFFHPIEEDFLFTIYKDG--HMFLYDMQTNEVLKTSRHLGSNISCADVDPFGE 121

Query: 360 LIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPT-----WSPSGRSLIFSRKKDG 412
           + A     G    + I  M++  +  ++     N Q+       ++P   +++ S    G
Sbjct: 122 IFAIACSDGSIRIYDIEYMQRTTALVKISGHSGNAQSNQIFDLIFNPDDSNILLSAV--G 179

Query: 413 DTGSKLYSIDLNGRNETLINTP 434
           +    ++    +G +E  I+ P
Sbjct: 180 NDKVMIWD-RRSGNSEKTISGP 200



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 72/179 (40%), Gaps = 13/179 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+  +VA+++  +E +++  +    +    + + +   +     F    +  L ++ 
Sbjct: 28  AYSPDGSQVAFSSSPNEMVVKNVINGEDVQTLQQSVTSHPLISCF--FHPIEEDFLFTIY 85

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           KD  M +Y  D+Q+N   + +  L  NIS A   P        +  +G  ++Y ++    
Sbjct: 86  KDGHMFLY--DMQTNEVLKTSRHLGSNISCADVDPFGEIFA-IACSDGSIRIYDIEYMQR 142

Query: 337 DQKRISQDKEASY------FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
               +     +        FD +++P    I  +    +K  I   ++ G+ E+ +   
Sbjct: 143 TTALVKISGHSGNAQSNQIFDLIFNPDDSNILLSAVGNDKVMIW-DRRSGNSEKTISGP 200


>gi|328867164|gb|EGG15547.1| autophagy protein 16 [Dictyostelium fasciculatum]
          Length = 578

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 46/287 (16%), Positives = 88/287 (30%), Gaps = 66/287 (22%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    S+ + D    N +       Q +   +FSPN + +   + D+       L +  
Sbjct: 308 SGSSDKSVKLWDAFSGNHKTTLLGASQSIMAVQFSPNDEHILGTSNDN----SARLWNVE 363

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY-------------------S 286
           + R    +      +   +F +   +   +   D  + ++                    
Sbjct: 364 LGRPRHTLTGHIGKVYTGKFFAGSDKVA-TGSHDRTIKLWDLQKGYCNRTIFCFSSCNDL 422

Query: 287 VDLQSNAT---------------------ERLTN-TLFINISASYSPDSSQIVFESDREG 324
           + L   +T                       LT        S S S D   I+  + R+ 
Sbjct: 423 LPLSGGSTIVSGHVDHSIRFWDSNTGEPIHVLTGVHEGQVTSISQSLDPFTIL-TNSRDH 481

Query: 325 KEQLYVMQSNGSDQKRISQDKEA----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-D 379
              L ++     +  R  +D++     ++    WSP    IA     G    + V     
Sbjct: 482 T--LKLIDVRTYETIRTFKDQDYRNGLNWTRAAWSPDSAYIASGSIDGS---VCVWNAHT 536

Query: 380 GSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           G  E+++       S++ +  WSP G S +      GD    +   D
Sbjct: 537 GKTEKIITKIHNTGSSVCSVVWSPLGNSFL-----SGDKDKNIVLWD 578


>gi|326446014|ref|ZP_08220748.1| WD-40 repeat protein [Streptomyces clavuligerus ATCC 27064]
          Length = 1245

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 52/316 (16%), Positives = 89/316 (28%), Gaps = 54/316 (17%)

Query: 120 GKDRLRVEFR------LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
              RL V +R      LWD +  ++++      +P    ++    +DD   +     G  
Sbjct: 718 PGGRLYVSYRPGAGLTLWDTRTGRRLLAVPGKQTPV---RLVTLSADDGLLAFCPSGG-- 772

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATY 231
                              L + D  G+  R  TP    I        +P+ +  A +T 
Sbjct: 773 ------------------RLQLWD-TGSGRRLATPGASGICAAESLVPAPDGRSFAVSTE 813

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                  V + D R  R   RI    S   A  F S+G            +   +     
Sbjct: 814 GG-----VRVWDARTGRTLHRIPARGSATTA--FGSDGTLLATLDSAGVGLWRLTTGAPP 866

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQL-YVMQSNGSDQKRISQDKEASYF 350
               R+             PD+  +     R  + Q    + +   D+        A   
Sbjct: 867 RPLLRVPRGAMNLAELRIDPDTGAL-----RSLEYQPSLTLWTFAYDRAAAQGPGAAPLG 921

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-----QAP-TWSPSGRSL 404
              +SP G  +         + +     DG    +L             P  +SP GR  
Sbjct: 922 RAAYSPDGTRLV--THRAGAYRVR-DAADGRVLAVLPGPGGAVGCGECVPMAFSPDGRHF 978

Query: 405 IFSRKKDGDTGSKLYS 420
            ++      T   L +
Sbjct: 979 GYADASGRLTVRDLVT 994



 Score = 36.5 bits (83), Expect = 8.7,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 68/275 (24%), Gaps = 38/275 (13%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +L     D              L    +SP+  ++         +               
Sbjct: 901  TLWTFAYD---RAAAQGPGAAPLGRAAYSPDGTRLVTHRAGAYRVRDAADGRVLAVLPGP 957

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                     +   FS +G+    +   D +  +   DL +  +         +   S   
Sbjct: 958  GGAVGCGECVPMAFSPDGRHFGYA---DASGRLTVRDLVTGVSRSAPAPPSFDGGLSVGA 1014

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GE 369
              ++I   + R G               R+   +        WS    L+A       G 
Sbjct: 1015 GGTEI--RASRSGPGH--------KSVDRLRLPERGGSGSRGWS---TLLAGVHGPVLGT 1061

Query: 370  KFAIGVM--------KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-------KKDGDT 414
                 V+         + G    +L    +  A  + P G     +         + G  
Sbjct: 1062 TPEDAVLTGRRTLIEPRTGRARTVLPGAGHAHAVAFGPDGAHTALTGADGRVTLWRSGGR 1121

Query: 415  GS--KLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
                +L   D           PA++ D +WV   D
Sbjct: 1122 APLAELAPADPAAAFRARPPAPAFSPDSRWVALAD 1156


>gi|297272384|ref|XP_002800421.1| PREDICTED: notchless protein homolog 1 [Macaca mulatta]
          Length = 461

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 316 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 372

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 373 KLWDGRTGKYLGSLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 431

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 432 ADEVYAVDWSPDGQRVA 448



 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 47/170 (27%), Gaps = 30/170 (17%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    +      +++  FS  GK    S   D  +  + +   S  T   T       
Sbjct: 103 VTRCTSSLDGHSEAVISVAFSPTGKYLA-SGSGDTTVRFWDL---STETPHFTCKGHRHW 158

Query: 304 NISASYSPDSSQIV---------------------FESDREGKEQLYVMQSNGSDQKRIS 342
            +S S+SPD  ++                      + +       + +  +     +RI 
Sbjct: 159 VLSISWSPDGKKLASGCKNGQILLWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERIL 218

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                S     W   G  + ++        +     DG   R L    + 
Sbjct: 219 TGHTQSVTCLRWGGDG--LLYSASQDRTIKVWRAH-DGVLCRTLQGHGHW 265



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 37/123 (30%), Gaps = 24/123 (19%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA------------------ 227
           SG    ++   D       +        +    +SP+ +K+A                  
Sbjct: 131 SGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNGQILLWEPLHANP 190

Query: 228 ---YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
              Y     +D   V + DT   R  + +      +   R+  +G   L S  +D  + +
Sbjct: 191 ECRYVASSSKDG-SVRIWDTTAGRCERILTGHTQSVTCLRWGGDG--LLYSASQDRTIKV 247

Query: 285 YSV 287
           +  
Sbjct: 248 WRA 250



 Score = 38.8 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 45/147 (30%), Gaps = 32/147 (21%)

Query: 292 NATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            A  R T++L  +  A    ++SP    +   S   G   +     +        +    
Sbjct: 101 RAVTRCTSSLDGHSEAVISVAFSPTGKYLASGS---GDTTVRFWDLSTETPHFTCKGHRH 157

Query: 348 SYFDPVWSPQGDLIA---------------------FTKFSGEKFAIGVMKKD-GSQERL 385
                 WSP G  +A                     +   S +  ++ +     G  ER+
Sbjct: 158 WVLSISWSPDGKKLASGCKNGQILLWEPLHANPECRYVASSSKDGSVRIWDTTAGRCERI 217

Query: 386 LV-EDSNLQAPTWSPSGRSLIFSRKKD 411
           L     ++    W   G  L++S  +D
Sbjct: 218 LTGHTQSVTCLRWGGDG--LLYSASQD 242



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 37/100 (37%), Gaps = 6/100 (6%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++LF  +S +         +   DG   +YL         +++  +S + + +   + D 
Sbjct: 353 QVLFSPDSRIVASASFDKSIKLWDGRTGKYLGSLRGHVAAVYQIAWSADSRLLVSGSSDS 412

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                + + D +  +    +      + A  +S +G+R  
Sbjct: 413 ----TLKVWDVKAQKLAMDLPGHADEVYAVDWSPDGQRVA 448


>gi|291415469|ref|XP_002723974.1| PREDICTED: eukaryotic translation initiation factor 3, subunit 9
           eta, 116kDa [Oryctolagus cuniculus]
          Length = 717

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/242 (14%), Positives = 79/242 (32%), Gaps = 33/242 (13%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           D  N+RY     +          +  + +    D +D + +       +           
Sbjct: 192 DLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV-------- 243

Query: 259 MILAPRFSSNGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                R+S  G       Q+            +   S+   +L +         +SP   
Sbjct: 244 -----RWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLID---------FSPCER 289

Query: 315 QIVFES----DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            +V  S     ++  + + +       +KR    +  A +    WS  G    F + + +
Sbjct: 290 YLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHCESSAHWPIFKWSHDGKF--FARMTLD 347

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             +I      G  ++  ++ S ++  +WSP G  + F   +D D  +++  + L  R E 
Sbjct: 348 TLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPSRQEI 407

Query: 430 LI 431
            +
Sbjct: 408 RV 409


>gi|251794383|ref|YP_003009114.1| 6-phosphogluconolactonase [Paenibacillus sp. JDR-2]
 gi|247542009|gb|ACS99027.1| 6-phosphogluconolactonase [Paenibacillus sp. JDR-2]
          Length = 356

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 31/231 (13%), Positives = 67/231 (29%), Gaps = 30/231 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR----------FSSNGKR 271
           + + V   +Y    I  V L D         I         P           FS +G+ 
Sbjct: 107 DSEFVLLCSYHGGRISLVSLTDNGEIGEILDIQQHEGSGPHPNQKTPHPHSTNFSPDGQY 166

Query: 272 ALISVQKDEAMDIYSVDLQSNATER----LTNTLFINISASYSPDSSQIVFESDR-EGKE 326
             +     + +  Y++D ++    R    +          ++ P+  Q  F  +  +   
Sbjct: 167 IFVPDLGIDRIVAYTLDKENRKLVRHGETVVQPGAGPRHMTFHPNG-QFAFVINELDSTI 225

Query: 327 QLYVMQSNGS---DQKRISQDKEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             +   +        + +S   E         +   S  G  +  +    +  A+  +  
Sbjct: 226 NSFRYDAEKGALEAVQTVSTLPEGFAEANGTAEIAISEDGRFLYGSNRGHDSLAVFAVDA 285

Query: 379 DGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           +  Q  L+     E  + +     P G     +  KD      ++ I  +G
Sbjct: 286 ESGQLTLVGHVSTEGKHPRHFALVP-GGHFAITANKD-TNNVAVFRISESG 334



 Score = 40.0 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 58/178 (32%), Gaps = 17/178 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALI 274
            FSP+ Q +       + I+  Y +D    +  +           PR   F  NG+ A +
Sbjct: 159 NFSPDGQYIFVPDLGIDRIV-AYTLDKENRKLVRHGETVVQPGAGPRHMTFHPNGQFAFV 217

Query: 275 SVQKDEAMDIYSVDLQSNATERL-TNTLFINISA--------SYSPDSSQIVFESDREGK 325
             + D  ++ +  D +  A E + T +      A        + S D  + ++ S+R   
Sbjct: 218 INELDSTINSFRYDAEKGALEAVQTVSTLPEGFAEANGTAEIAISEDG-RFLYGSNRGHD 276

Query: 326 E-QLYVMQSNGSDQKRISQDKEASYFDPVWS--PQGDLIAFTKFSGEKFAIGVMKKDG 380
              ++ + +       +            ++  P G             A+  + + G
Sbjct: 277 SLAVFAVDAESGQLTLVGHVSTEGKHPRHFALVPGGHFAITANKDTNNVAVFRISESG 334


>gi|145489191|ref|XP_001430598.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124397697|emb|CAK63200.1| unnamed protein product [Paramecium tetraurelia]
          Length = 424

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 42/317 (13%), Positives = 95/317 (29%), Gaps = 40/317 (12%)

Query: 99  RFQDWNSLGAQVL--VTGRVIKEGK----DRLRVEFRLWDVKDRKQIIGKKFFSSPASWR 152
           +F+ + +L A +L        K G            ++WD    ++I+  +         
Sbjct: 82  QFELFKTLKAHMLPLTNCAFNKNGDKFITGSYDRTCKVWDTFTGEEIVSLE--------- 132

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
              H   + +Y         F  R++       +G    +  + D +           + 
Sbjct: 133 --GHK--NVVY--CIAFNNPFGDRVV-------TGSFDKTAKIWDANSGKCLQTLVGHNY 179

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +    F P+   VA  + D        L D    +   R+      I++  F+S+G + 
Sbjct: 180 EIVCTSFDPHSLIVATGSMDK----TARLWDVESGKQIARLDGHDGEIVSLHFNSDGDKL 235

Query: 273 LISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
           L +   D+   I+  D++S      L        S  +        + +     +   + 
Sbjct: 236 L-TGSFDKTAMIW--DVRSGECIHMLDEHTGEISSTQFEFTGD---YCATGSIDKTCKIW 289

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                      +  +    D  ++  G  +           +  +       +LL     
Sbjct: 290 DIKTGKCIETLRGHKDEVQDICFNSTGTRLVTVSADATG-RVYNVHTGECIAQLLGHKGE 348

Query: 392 LQAPTWSPSGRSLIFSR 408
           +    ++PSG  +I + 
Sbjct: 349 ISKVQFNPSGNKIITAS 365



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 59/196 (30%), Gaps = 32/196 (16%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIG------------------KKFFSSPASW 151
           ++ TG + K          RLWDV+  KQI                    K    S    
Sbjct: 192 IVATGSMDKTA--------RLWDVESGKQIARLDGHDGEIVSLHFNSDGDKLLTGSFDKT 243

Query: 152 RKIAHTISDDIYQSITGEKG-DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
             I    S +    +    G   +++  F  +   +G I  +  + D             
Sbjct: 244 AMIWDVRSGECIHMLDEHTGEISSTQFEFTGDYCATGSIDKTCKIWDIKTGKCIETLRGH 303

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
              + +  F+    ++   + D        + +        ++   +  I   +F+ +G 
Sbjct: 304 KDEVQDICFNSTGTRLVTVSADATGR----VYNVHTGECIAQLLGHKGEISKVQFNPSGN 359

Query: 271 RALISVQKDEAMDIYS 286
           +  I+   D    I+S
Sbjct: 360 KI-ITASADNTARIFS 374


>gi|148657920|ref|YP_001278125.1| hypothetical protein RoseRS_3821 [Roseiflexus sp. RS-1]
 gi|148570030|gb|ABQ92175.1| hypothetical protein RoseRS_3821 [Roseiflexus sp. RS-1]
          Length = 953

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 49/142 (34%), Gaps = 25/142 (17%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           F ++          L  +  DG  +R LT S  +I       P+    A A    +D+  
Sbjct: 131 FRNQPNGRPAYSWRLFEIGVDGRGLRQLTRSDREITI-----PDGPGNAEAYAFYDDLFP 185

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKRALISVQKDEAMDIYSVDLQSNATERL 297
            YL D RI           S    P  S  +G+RA          ++Y +D       RL
Sbjct: 186 AYLADGRI---------VFSSSRYPARSPYDGRRAF---------NLYIIDGDGGNMRRL 227

Query: 298 TNTLFINISASYSPDSSQIVFE 319
           T         +  PD  +IVF 
Sbjct: 228 TTERTAAFHPAPLPDG-RIVFS 248



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 36/131 (27%), Gaps = 39/131 (29%)

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------------FAIGVMKKDGSQERLLV 387
           ++         P  S     + F    G +             + +  +  DG   R L 
Sbjct: 100 LNPLGLRDVQSPDVSFDARRVVFAGTFGPETFRNQPNGRPAYSWRLFEIGVDGRGLRQLT 159

Query: 388 ED------------------SNLQAPTWSPSGRSLIFSRKK-------DGDTGSKLYSID 422
                                +   P +   GR ++FS  +       DG     LY ID
Sbjct: 160 RSDREITIPDGPGNAEAYAFYDDLFPAYLADGR-IVFSSSRYPARSPYDGRRAFNLYIID 218

Query: 423 LNGRNETLINT 433
            +G N   + T
Sbjct: 219 GDGGNMRRLTT 229



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 50/293 (17%), Positives = 98/293 (33%), Gaps = 40/293 (13%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVAT--------NSANYSPVSIAF 52
           M +R   A  L   ++L LLL  +           +                  P  +  
Sbjct: 1   MLMRRAFARVLQFILSLMLLLAPVLAVQSAQAQTPLPPLVFVARSRLATGDYLFPRDVGP 60

Query: 53  TK--FVSIDELGGKVSEVVSKDLQRSDVFNL-ISQDSFKQKITNPDSIPRFQDWN-SLGA 108
                  I +     S+++ +D  +S    + +          NP  +   Q  + S  A
Sbjct: 61  AGHMITGITKFAPG-SKLLIRD--QSGQLRVLVDTARPAGDPLNPLGLRDVQSPDVSFDA 117

Query: 109 QVLVTGRV------IKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKI-------- 154
           + +V            +   R    +RL+++     + G+       S R+I        
Sbjct: 118 RRVVFAGTFGPETFRNQPNGRPAYSWRLFEIG----VDGRGLRQLTRSDREITIPDGPGN 173

Query: 155 --AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
             A+   DD++ +   +     S   + + S   G    +L ++D DG N+R LT  R  
Sbjct: 174 AEAYAFYDDLFPAYLADGRIVFSSSRYPARSPYDGRRAFNLYIIDGDGGNMRRLTTER-T 232

Query: 213 ILFEPRFSPNQQKV---AYATYDDEDILRVYL-MDTRIDRAPKRIGNFRSMIL 261
             F P   P+ + V    +  ++      +Y  +D R      R  + R +++
Sbjct: 233 AAFHPAPLPDGRIVFSRWWVNFNQPSERGIYNRIDNRAGNEIARDQSGRPIVV 285


>gi|148230284|ref|NP_001089468.1| POC1 centriolar protein homolog B [Xenopus laevis]
 gi|66911527|gb|AAH97649.1| MGC114911 protein [Xenopus laevis]
 gi|112382663|gb|ABI17539.1| WD40 repeat protein Pix1 [Xenopus laevis]
          Length = 468

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 58/172 (33%), Gaps = 11/172 (6%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
             +  +    FS + K+   S   D  + I++   QS A +   +   +     +SP   
Sbjct: 16  GHKDAVTCVDFSPDSKQLA-SSSADACVMIWNFKPQSRAYKYPGHKEAV-TCVQFSPSG- 72

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            +V  S ++   +L+     G     + +   A      +S  G     T    +     
Sbjct: 73  HLVASSSKDRTVRLWAPNIKGEST--VLKAHTAVVRCVNFSSDGQTFI-TASDDKSIKAW 129

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
            + +      L    + ++   +SP GR +        D   +++  DL  R
Sbjct: 130 NLHRQRFLFSLTQHTNWVRCARFSPDGRLIASCSD---DKTVRIW--DLTNR 176



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 63/198 (31%), Gaps = 30/198 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + Q    A+ D      +   +    R    +    + +   RFS +G+    S  
Sbjct: 109 NFSSDGQTFITASDDK----SIKAWNLHRQRFLFSLTQHTNWVRCARFSPDGRLIA-SCS 163

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF------ESDREGKEQLYVM 331
            D+ + I+           LTN L IN    Y   S+ + F       +       + V 
Sbjct: 164 DDKTVRIWD----------LTNRLCINTFVDYKGHSNYVDFNQMGTCVASAGADSTVKVW 213

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
               +   +  Q   A      + P G+ +      G    + ++     + RL+     
Sbjct: 214 DIRMNKLLQHYQVHNAGVSSLSFHPSGNYLLTASSDGTLKILDLL-----EGRLIYTLHG 268

Query: 392 LQAP----TWSPSGRSLI 405
            Q P    T+S SG    
Sbjct: 269 HQGPVLSVTFSKSGDQFA 286


>gi|78048282|ref|YP_364457.1| putative peptidase (C-terminal fragment) [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
 gi|78036712|emb|CAJ24405.1| putative peptidase (C-terminal fragment) [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
          Length = 606

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 9/106 (8%)

Query: 312 DSSQIVFESDREGKEQLYVMQ-SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
           D +QIV+ S+R+G E LY+    NG   +++++                 + FT      
Sbjct: 189 DGAQIVWASERDGWEHLYLYDGHNGEVIRQVTRGDWVVRKLDRIDQAAGQVYFTASGMQP 248

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSR 408
                      +  DG     L   +      +SP G  L  ++SR
Sbjct: 249 GEDPYYRHAYRIGLDGRGLTALTPLAADHEVRYSPDGTWLLDLYSR 294



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 45/129 (34%), Gaps = 12/129 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA-SYSPDSSQIVFES----- 320
           +G + + + ++D    +Y  D  +     ++T   ++          + Q+ F +     
Sbjct: 189 DGAQIVWASERDGWEHLYLYDGHNGEVIRQVTRGDWVVRKLDRIDQAAGQVYFTASGMQP 248

Query: 321 -DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMK 377
            +       Y +  +G     ++    A+  +  +SP G  +   +++            
Sbjct: 249 GEDPYYRHAYRIGLDGRGLTALTPL--AADHEVRYSPDGTWLLDLYSRVDLGPVLELRRS 306

Query: 378 KDGSQERLL 386
            DGS  R +
Sbjct: 307 ADGSLARTV 315


>gi|320164951|gb|EFW41850.1| WD repeat protein 61 [Capsaspora owczarzaki ATCC 30864]
          Length = 300

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 70/193 (36%), Gaps = 10/193 (5%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES+ +G  K ++ V D    N       R +      +SPN + VA    D      V++
Sbjct: 115 ESIATGGEKGNISVFDVATGNKHDGFEPRGKFSLSVAYSPNGRFVACGAQDG----IVHI 170

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D   ++   ++      + A  FS +    L++   D  + ++ V+   N     +   
Sbjct: 171 FDVEQNKLMHKLEAHAMPVRALAFSPD-SALLLTGSDDALIKLHDVEH-GNNLYTFSGHA 228

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               S ++SP+       S     +++ V   +  +        +   +   ++  GD +
Sbjct: 229 SWITSLAFSPNGVHF---SSSSIDKKVKVWDISTHETLHTFDTHDDQVWAIAYNRTGDRM 285

Query: 362 AFTKFSGEKFAIG 374
           A +  +  K  + 
Sbjct: 286 A-SAANNGKIHVY 297


>gi|301093028|ref|XP_002997363.1| intraflagellar Transport protein 80 [Phytophthora infestans T30-4]
 gi|262110761|gb|EEY68813.1| intraflagellar Transport protein 80 [Phytophthora infestans T30-4]
          Length = 767

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 58/160 (36%), Gaps = 14/160 (8%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + +   ++ A  ++       I+   D ++  + +D        +T       S  + P 
Sbjct: 10  VNHHTEIVTACCWTPEND--AITCSDDNSIVRWRMD--GEVVGAVTKMDAYVTSVHWVPS 65

Query: 313 -SSQIV--F-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
              Q    F  S  +G  +L  +  +G ++KR+      +     W+  G  +     +G
Sbjct: 66  VGKQSADTFAVSCTDGTFRL--ISKSGREEKRVQACDAGAVIALKWNYDGTALV---TAG 120

Query: 369 EKFAIGVMKKDGS-QERLLVEDSNLQAPTWSPSGRSLIFS 407
           E   + +  + G+ +  L     ++    W P    L+F+
Sbjct: 121 EDGTLKIWSRSGNLRSTLATTGRSVYGVCWGPDSDQLLFT 160



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 65/189 (34%), Gaps = 17/189 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +++ +    A  T  ++  L+++   +R       +      +    +  +  + L +  
Sbjct: 108 KWNYDGT--ALVTAGEDGTLKIW---SRSGNLRSTLATTGRSVYGVCWGPDSDQLLFT-- 160

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
               + I +V L      +        +   ++P +++++      G+++++ +      
Sbjct: 161 HGNNLVIKTVQL-GRKDIQWKAHDGSILCLDWNPINNRLI----SGGEDRIFRVWDAFGR 215

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPT 396
           Q   S   E       W P G   A   ++     + +  + G S  R   +  +L    
Sbjct: 216 QLYQSPAGEHVVTSVAWCPNGSCFAVGSYN----MLRLCDQTGWSYCRQRPQSGSLMDLA 271

Query: 397 WSPSGRSLI 405
           W+     L+
Sbjct: 272 WASDSTQLV 280



 Score = 40.0 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 29/200 (14%), Positives = 69/200 (34%), Gaps = 23/200 (11%)

Query: 253 IGNFRSMILAPRFSSN-GKRAL--ISVQKDEAMDIYSVDLQSNATERL-TNTLFINISAS 308
           +    + + +  +  + GK++    +V   +      +       +R+        I+  
Sbjct: 50  VTKMDAYVTSVHWVPSVGKQSADTFAVSCTDGT-FRLISKSGREEKRVQACDAGAVIALK 108

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++ D + +V  +  +G  +++   S   + +        S +   W P  D + FT   G
Sbjct: 109 WNYDGTALV-TAGEDGTLKIW---SRSGNLRSTLATTGRSVYGVCWGPDSDQLLFTH--G 162

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               I  ++      +    D ++    W+P + R +        D   +++  D  GR 
Sbjct: 163 NNLVIKTVQLGRKDIQWKAHDGSILCLDWNPINNRLI----SGGEDRIFRVW--DAFGR- 215

Query: 428 ETLINTPAY---ASDPQWVG 444
             L  +PA     +   W  
Sbjct: 216 -QLYQSPAGEHVVTSVAWCP 234


>gi|150863699|ref|XP_001382260.2| protein involved in cell-cycle regulation of histone transcription
           [Scheffersomyces stipitis CBS 6054]
 gi|149384955|gb|ABN64231.2| protein involved in cell-cycle regulation of histone transcription
           [Scheffersomyces stipitis CBS 6054]
          Length = 959

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 75/223 (33%), Gaps = 33/223 (14%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYD--------------DEDILRVYLMDTRIDRAPKR 252
               + ++   +FSP+ + +A  + D                      + D       KR
Sbjct: 84  MSRHNGVVTSVKFSPDGRFLASGSDDKICLIWEKDEEQSNRPKQFGEVVADLEHWTVRKR 143

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +    + I    +S +G   L++V  D ++ I++  L     +R      +     + P 
Sbjct: 144 LVAHDNDIQDICWSPDGG-LLVTVGLDRSIIIWN-GLTFERIKRYDIHQSMVKGVVFDPA 201

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-------------VWSPQGD 359
           +      SD +   +++      ++        E    DP              WSP G 
Sbjct: 202 NKFFATASD-DRTVRIFRYYKKLNEYNNYEFQMEHIVMDPFKKSPLTSYFRRMSWSPDGQ 260

Query: 360 LIAFTKFSGEKF-AIGVMKKDG--SQERLLVEDSNLQAPTWSP 399
            IA    +     +I ++++    +   L+  ++  +  ++SP
Sbjct: 261 HIAVPNATNGPVPSIAIIRRGNWATDISLIGHEAPCEVCSFSP 303



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 40/251 (15%), Positives = 79/251 (31%), Gaps = 49/251 (19%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V D +   +R    + D  + +  +SP+   +     D      + + +       KR  
Sbjct: 132 VADLEHWTVRKRLVAHDNDIQDICWSPDGGLLVTVGLDR----SIIIWNGLTFERIKRYD 187

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIY-------------------SVDLQSNATE 295
             +SM+    F    K    +   D  + I+                    +D    +  
Sbjct: 188 IHQSMVKGVVFDPANKFFA-TASDDRTVRIFRYYKKLNEYNNYEFQMEHIVMDPFKKSP- 245

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQ-DKEASYFDPV 353
            LT+        S+SPD   I   +   G    + +++  G+    IS    EA      
Sbjct: 246 -LTSYF---RRMSWSPDGQHIAVPNATNGPVPSIAIIRR-GNWATDISLIGHEAPCEVCS 300

Query: 354 WSP--------------QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPT 396
           +SP                         G+   + +     S+  ++ E   +S++    
Sbjct: 301 FSPRLFDISETTKKTTSDSQFSTILATGGQDQTLAIWSTATSRPLVVAENIVNSSITDIC 360

Query: 397 WSPSGRSLIFS 407
           W+P G++L  S
Sbjct: 361 WTPDGQALYLS 371



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 64/191 (33%), Gaps = 35/191 (18%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIY----------------SVDLQS-NATER 296
                ++ + +FS +G+    S   D+   I+                  DL+     +R
Sbjct: 85  SRHNGVVTSVKFSPDGRFLA-SGSDDKICLIWEKDEEQSNRPKQFGEVVADLEHWTVRKR 143

Query: 297 LTNTLFINISASYSPDSSQIVFES-DRE-------GKEQLYVMQSNGSDQKRISQDKEAS 348
           L           +SPD   +V    DR          E++     + S  K +  D  A+
Sbjct: 144 LVAHDNDIQDICWSPDGGLLVTVGLDRSIIIWNGLTFERIKRYDIHQSMVKGVVFD-PAN 202

Query: 349 YFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
            F    S    +  F       +++  +F +  +  D  ++  L   S  +  +WSP G+
Sbjct: 203 KFFATASDDRTVRIFRYYKKLNEYNNYEFQMEHIVMDPFKKSPLT--SYFRRMSWSPDGQ 260

Query: 403 SLIFSRKKDGD 413
            +      +G 
Sbjct: 261 HIAVPNATNGP 271


>gi|195432074|ref|XP_002064051.1| GK19916 [Drosophila willistoni]
 gi|194160136|gb|EDW75037.1| GK19916 [Drosophila willistoni]
          Length = 356

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 70/224 (31%), Gaps = 11/224 (4%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +       +    +SP+++ +  ++ D     R+ + D         +    + I+A
Sbjct: 60  PRKVLKGHQAKVLCTDWSPDKRHIISSSQDG----RLIIWDAFTTNKEHAVTMPTTWIMA 115

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESD 321
             ++ +G         ++         +  A ++ T     +  S    P+S Q +    
Sbjct: 116 CAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTG- 174

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDG 380
             G     +         +              +P      F   S ++ A I  M+   
Sbjct: 175 -SGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGH 233

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +      S++ +  + P G ++        D+  +LY +  +
Sbjct: 234 VVQSFEGHQSDVNSVKFHPCGDAIATGSD---DSSCRLYDMRAD 274


>gi|195049015|ref|XP_001992636.1| GH24861 [Drosophila grimshawi]
 gi|193893477|gb|EDV92343.1| GH24861 [Drosophila grimshawi]
          Length = 357

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 70/224 (31%), Gaps = 11/224 (4%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +       +    +SP+++ +  ++ D     R+ + D         +    + I+A
Sbjct: 61  PRKVLKGHQAKVLCTDWSPDKRHIISSSQDG----RLIIWDAFTTNKEHAVTMPTTWIMA 116

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESD 321
             ++ +G         ++         +  A ++ T     +  S    P+S Q +    
Sbjct: 117 CAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTG- 175

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDG 380
             G     +         +              +P      F   S ++ A I  M+   
Sbjct: 176 -SGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGH 234

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +      S++ +  + P G ++        D+  +LY +  +
Sbjct: 235 VVQSFEGHQSDVNSVKFHPCGDAIATGSD---DSSCRLYDMRAD 275


>gi|194763703|ref|XP_001963972.1| GF20976 [Drosophila ananassae]
 gi|190618897|gb|EDV34421.1| GF20976 [Drosophila ananassae]
          Length = 358

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 70/224 (31%), Gaps = 11/224 (4%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +       +    +SP+++ +  ++ D     R+ + D         +    + I+A
Sbjct: 62  PRKVLKGHQAKVLCTDWSPDKRHIISSSQDG----RLIIWDAFTTNKEHAVTMPTTWIMA 117

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESD 321
             ++ +G         ++         +  A ++ T     +  S    P+S Q +    
Sbjct: 118 CAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTG- 176

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDG 380
             G     +         +              +P      F   S ++ A I  M+   
Sbjct: 177 -SGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGH 235

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +      S++ +  + P G ++        D+  +LY +  +
Sbjct: 236 VVQSFEGHQSDVNSVKFHPCGDAIATGSD---DSSCRLYDMRAD 276


>gi|161504064|ref|YP_001571176.1| 6-phosphogluconolactonase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|189027520|sp|A9MJH1|6PGL_SALAR RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|160865411|gb|ABX22034.1| hypothetical protein SARI_02157 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 331

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 72/234 (30%), Gaps = 16/234 (6%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 2   KQTVYTASPESQQIHVWSLNHEGMLTLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 61

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPD-SSQIVFE-SDREGKEQLYVMQSNGSDQKRI 341
            Y +     A    T +         S D   + VF  S   G   + V +        +
Sbjct: 62  AYRIAPDDGALTFATESALPGSPTHISTDHHGRFVFVGSYNAGN--VSVTRLQDGLPVEL 119

Query: 342 SQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDG------SQERLLVEDSNLQ 393
               E          +P    +       ++ A+  +  DG        E   VE +  +
Sbjct: 120 VDVVEGLDGCHSANITPDNRTLWVPALKQDRIALFTLSDDGYLAAQEPAEVNTVEGAGPR 179

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
              + P+ +   +   +   +       + +G  E   TL   PA  SD +W  
Sbjct: 180 HMVFHPN-QQYAYCVNELNSSVDVWQLKNPHGEIECVQTLDMMPADFSDTRWAA 232


>gi|146088241|ref|XP_001466026.1| notchless homolog [Leishmania infantum JPCM5]
 gi|134070127|emb|CAM68460.1| putative notchless homolog [Leishmania infantum JPCM5]
          Length = 522

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 15/128 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---P 263
                 ++F  +FSP+   +A  + D      V L +    R    I  FR  + A    
Sbjct: 405 MTGHQGVVFHIQFSPDGTMLASCSADK----SVKLWNAEDGRF---ITTFRGHVAAVYHV 457

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDR 322
            +S +  R L+S  KD  + ++SV           +     I A+ +SPD  ++     +
Sbjct: 458 SWSLD-SRMLVSGSKDTTVKLWSV--AKRELVEDMSGHSDEIYATDWSPDGQKVA-TGSK 513

Query: 323 EGKEQLYV 330
           +   +++V
Sbjct: 514 DKHVRIWV 521



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 42/125 (33%), Gaps = 6/125 (4%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+   + ++   +FS +G     S   D+++ +++ +            +      S+S 
Sbjct: 404 RMTGHQGVVFHIQFSPDGTMLA-SCSADKSVKLWNAE-DGRFITTFRGHVAAVYHVSWSL 461

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           DS  +V  S       + +      +            +   WSP G  +A T    +  
Sbjct: 462 DSRMLVSGSK---DTTVKLWSVAKRELVEDMSGHSDEIYATDWSPDGQKVA-TGSKDKHV 517

Query: 372 AIGVM 376
            I V 
Sbjct: 518 RIWVH 522



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 14/142 (9%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  M +++         R+T    +     +SPD + +   S     + +
Sbjct: 377 GSERLVSCSDDNTMFLWNPQQSVTPVARMTGHQGVVFHIQFSPDGTMLASCS---ADKSV 433

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +  +         +   A+ +   WS    ++              +K     +R LVE
Sbjct: 434 KLWNAEDGRFITTFRGHVAAVYHVSWSLDSRMLVSGSKDT------TVKLWSVAKRELVE 487

Query: 389 DSNLQAP-----TWSPSGRSLI 405
           D +  +       WSP G+ + 
Sbjct: 488 DMSGHSDEIYATDWSPDGQKVA 509



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 29/90 (32%), Gaps = 5/90 (5%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +    FSP+ Q +A           + + D       + +    S +    +
Sbjct: 149 TLDGHSEAVLVVSFSPDSQVLA----TGGGDKEIRIWDMNTLTPVEELKAHTSWVQVLSW 204

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           S +G+  + S  KD  +  ++ +       
Sbjct: 205 SPDGRYLV-SGSKDGILANWTHNGGYGDFR 233



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            +SP   ++A T    ++  I  M      E L    S +Q  +WSP GR L+ S  KDG
Sbjct: 161 SFSPDSQVLA-TGGGDKEIRIWDMNTLTPVEELKAHTSWVQVLSWSPDGRYLV-SGSKDG 218



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 13/88 (14%), Positives = 30/88 (34%), Gaps = 6/88 (6%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG             ++   +S + + +   + D      V L         + +     
Sbjct: 440 DG-RFITTFRGHVAAVYHVSWSLDSRMLVSGSKDT----TVKLWSVAKRELVEDMSGHSD 494

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYS 286
            I A  +S +G++   +  KD+ + I+ 
Sbjct: 495 EIYATDWSPDGQKVA-TGSKDKHVRIWV 521


>gi|114593209|ref|XP_001158182.1| PREDICTED: WD repeat-containing protein 1 isoform 2 [Pan
           troglodytes]
          Length = 421

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 11/86 (12%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWS 398
           D         +SP G+  A     G    I +      ++          D  + A +WS
Sbjct: 2   DHSRFVNCVRFSPDGNRFATASADG---QIYIYDGKTGEKVCALGGSKAHDGGIYAISWS 58

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLN 424
           P    L+      GD  SK++ + +N
Sbjct: 59  PDSTHLL---SASGDKTSKIWDVSVN 81



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRALI 274
           RFSP+  + A A+ D     ++Y+ D +       +G  +     I A  +S +    L 
Sbjct: 11  RFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLL- 65

Query: 275 SVQKDEAMDIYSVDLQS 291
           S   D+   I+ V + S
Sbjct: 66  SASGDKTSKIWDVSVNS 82


>gi|157823413|ref|NP_001099529.1| THO complex subunit 3 [Rattus norvegicus]
 gi|149039943|gb|EDL94059.1| THO complex 3 (predicted) [Rattus norvegicus]
 gi|197246426|gb|AAI68852.1| THO complex 3 [Rattus norvegicus]
          Length = 351

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 83/242 (34%), Gaps = 15/242 (6%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           SV SG  +  L + +   G +     P+    +    +S + +++A  ++D      V+L
Sbjct: 26  SVSSGPSRYVLGMQELFRGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFD--KTASVFL 83

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++                +    +  +     ++   D+ + I+  D+++       NT 
Sbjct: 84  LEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIW--DVRTTKCIATVNTK 141

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
             NI+  +SPD   I       G +   V   +    +  ++++     +   W+   ++
Sbjct: 142 GENINICWSPDGQTIAV-----GNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNM 196

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             F         I    +    + +    SN     + P G+   +      D    L+ 
Sbjct: 197 F-FLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGK---YFATGSADALVSLWD 252

Query: 421 ID 422
           +D
Sbjct: 253 VD 254



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 29/230 (12%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R    S DQ+ + P  +P+     + T   +  +R++  D R  +    + N +   +
Sbjct: 94  NYRGHGDSVDQLCWHPS-NPD----LFVTASGDKTIRIW--DVRTTKCIATV-NTKGENI 145

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +G+   +  + D    I +   +S A E+     F     S++ D++       
Sbjct: 146 NICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ---FKFEVNEISWNNDNNMFFLT-- 200

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G   + ++        +      ++     + P G   A          + +   D  
Sbjct: 201 -NGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADA---LVSLWDVD-- 254

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDG------DTGSKLYSI 421
           +   +   S L  P    ++S  G+ L  + +         +TG KL+ +
Sbjct: 255 ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEV 304


>gi|24640523|ref|NP_572452.1| Gbeta5 [Drosophila melanogaster]
 gi|194893601|ref|XP_001977905.1| GG17982 [Drosophila erecta]
 gi|195355825|ref|XP_002044388.1| GM11205 [Drosophila sechellia]
 gi|195480205|ref|XP_002101179.1| GE17476 [Drosophila yakuba]
 gi|195565713|ref|XP_002106443.1| GD16125 [Drosophila simulans]
 gi|7290895|gb|AAF46336.1| Gbeta5 [Drosophila melanogaster]
 gi|28557583|gb|AAO45197.1| RH17413p [Drosophila melanogaster]
 gi|190649554|gb|EDV46832.1| GG17982 [Drosophila erecta]
 gi|194130706|gb|EDW52749.1| GM11205 [Drosophila sechellia]
 gi|194188703|gb|EDX02287.1| GE17476 [Drosophila yakuba]
 gi|194203819|gb|EDX17395.1| GD16125 [Drosophila simulans]
 gi|220949234|gb|ACL87160.1| Gbeta5-PA [synthetic construct]
 gi|220960468|gb|ACL92770.1| Gbeta5-PA [synthetic construct]
          Length = 358

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 70/224 (31%), Gaps = 11/224 (4%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +       +    +SP+++ +  ++ D     R+ + D         +    + I+A
Sbjct: 62  PRKVLKGHQAKVLCTDWSPDKRHIISSSQDG----RLIIWDAFTTNKEHAVTMPTTWIMA 117

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESD 321
             ++ +G         ++         +  A ++ T     +  S    P+S Q +    
Sbjct: 118 CAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTG- 176

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDG 380
             G     +         +              +P      F   S ++ A I  M+   
Sbjct: 177 -SGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGH 235

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +      S++ +  + P G ++        D+  +LY +  +
Sbjct: 236 VVQSFEGHQSDVNSVKFHPCGDAIATGSD---DSSCRLYDMRAD 276


>gi|254553424|ref|NP_082873.2| THO complex subunit 3 [Mus musculus]
 gi|46397748|sp|Q8VE80|THOC3_MOUSE RecName: Full=THO complex subunit 3; Short=Tho3
 gi|18043908|gb|AAH19603.1| THO complex 3 [Mus musculus]
 gi|148709191|gb|EDL41137.1| THO complex 3 [Mus musculus]
          Length = 351

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 83/242 (34%), Gaps = 15/242 (6%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           SV SG  +  L + +   G +     P+    +    +S + +++A  ++D      V+L
Sbjct: 26  SVSSGPSRYVLGMQELFRGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFD--KTASVFL 83

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++                +    +  +     ++   D+ + I+  D+++       NT 
Sbjct: 84  LEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIW--DVRTTKCIATVNTK 141

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
             NI+  +SPD   I       G +   V   +    +  ++++     +   W+   ++
Sbjct: 142 GENINICWSPDGQTIAV-----GNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNM 196

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             F         I    +    + +    SN     + P G+   +      D    L+ 
Sbjct: 197 F-FLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGK---YFATGSADALVSLWD 252

Query: 421 ID 422
           +D
Sbjct: 253 VD 254



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 29/230 (12%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R    S DQ+ + P  +P+     + T   +  +R++  D R  +    + N +   +
Sbjct: 94  NYRGHGDSVDQLCWHPS-NPD----LFVTASGDKTIRIW--DVRTTKCIATV-NTKGENI 145

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +G+   +  + D    I +   +S A E+     F     S++ D++       
Sbjct: 146 NICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ---FKFEVNEISWNNDNNMFFLT-- 200

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G   + ++        +      ++     + P G   A          + +   D  
Sbjct: 201 -NGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADA---LVSLWDVD-- 254

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDG------DTGSKLYSI 421
           +   +   S L  P    ++S  G+ L  + +         +TG KL+ +
Sbjct: 255 ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEV 304


>gi|260063550|ref|YP_003196630.1| OmpA family protein [Robiginitalea biformata HTCC2501]
 gi|88782994|gb|EAR14168.1| OmpA family protein [Robiginitalea biformata HTCC2501]
          Length = 652

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 60/186 (32%), Gaps = 55/186 (29%)

Query: 279 DEAMDIYSVDLQSNATER-------LT----NTLFINISASYSPDSSQIVFESDREGKE- 326
           D   +IY  +    A  +       LT    N+ + + + S +     ++F SDR+    
Sbjct: 126 DARAEIYQANRDYQAEIQANSGRYDLTPFAFNSPYSDFAPSLT--GEGLLFSSDRDTGNL 183

Query: 327 -------------QLYVMQSNGSDQKRISQDKEASYFDP----VWSPQGDLIAFTKFSGE 369
                         LY +  + +  +R+++    +          SP G+ + FT+    
Sbjct: 184 ARYRHTWNSQDFLDLYEVSPDSARGQRVTKVDGVNSRFHESTSALSPDGNTLYFTR---N 240

Query: 370 KFAIGVMKKDGSQERLL---------------------VEDSNLQAPTWSPSGRSLIFSR 408
            F  G   +D +    L                      +  ++  P  SP GR L F+ 
Sbjct: 241 NFKEGKYTRDEAGFVRLKIFRAEKIDGVWATIEELPFNSDSYSVAHPALSPDGRVLYFAS 300

Query: 409 KKDGDT 414
              G  
Sbjct: 301 DMPGSR 306



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 46/147 (31%), Gaps = 20/147 (13%)

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +  + + D  D+  V     R  R  K  G N R        S +G     + + +    
Sbjct: 187 RHTWNSQDFLDLYEVSPDSARGQRVTKVDGVNSRFHESTSALSPDGNTLYFT-RNNFKEG 245

Query: 284 IYSVDLQSNATERLTNTLFIN------------------ISASYSPDSSQIVFESDREGK 325
            Y+ D       ++     I+                     + SPD   + F SD  G 
Sbjct: 246 KYTRDEAGFVRLKIFRAEKIDGVWATIEELPFNSDSYSVAHPALSPDGRVLYFASDMPGS 305

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDP 352
                 Q   SD  R+   ++ ++ +P
Sbjct: 306 RIGAADQVAQSDLWRVVIREDGTFGEP 332


>gi|125981535|ref|XP_001354771.1| GA10552 [Drosophila pseudoobscura pseudoobscura]
 gi|195165230|ref|XP_002023442.1| GL20190 [Drosophila persimilis]
 gi|54643082|gb|EAL31826.1| GA10552 [Drosophila pseudoobscura pseudoobscura]
 gi|194105547|gb|EDW27590.1| GL20190 [Drosophila persimilis]
          Length = 356

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/224 (12%), Positives = 70/224 (31%), Gaps = 11/224 (4%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +       +    +SP+++ +  ++ D     R+ + D         +    + I+A
Sbjct: 60  PRKVLKGHQAKVLCTDWSPDKRHIISSSQDG----RLIIWDAFTTNKEHAVTMPTTWIMA 115

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESD 321
             ++ +G         ++         +  A ++ T     +  S    P+S Q +    
Sbjct: 116 CAYAPSGNFVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTG- 174

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDG 380
             G     +         +              +P      F   S ++ A I  M+   
Sbjct: 175 -SGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGH 233

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +      S++ +  + P G ++        D+  +LY +  +
Sbjct: 234 VVQSFEGHQSDVNSVKFHPCGDAIATGSD---DSSCRLYDMRAD 274


>gi|297286643|ref|XP_001107891.2| PREDICTED: WD repeat and SOCS box-containing protein 2 [Macaca
           mulatta]
          Length = 405

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/199 (14%), Positives = 74/199 (37%), Gaps = 21/199 (10%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           ++ + + +       +   + ++    F+ +G   L+S  +D+ + I+ ++  S   + L
Sbjct: 134 QIKIWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHSKQIQVL 193

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              L      S SPD S +   ++    + +++         R  +  ++S     +SP 
Sbjct: 194 LGHLQWVYCCSISPDCSMLCSAAEE---KSVFLWSMRSYTLIRKLEGHQSSVVSCDFSPN 250

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-------------SNLQAPTWSPSGRSL 404
             L+    +      I        + R L                S+L++  +SP G   
Sbjct: 251 SALLVTASYDTN--VIMWDPYTRERLRSLHHTQVDPAMDDSDVHVSSLRSVCFSPEG--- 305

Query: 405 IFSRKKDGDTGSKLYSIDL 423
           ++      D   ++++++L
Sbjct: 306 LYLATVADDRLLRIWALEL 324


>gi|269963846|ref|ZP_06178159.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831419|gb|EEZ85565.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 370

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 34/93 (36%), Gaps = 4/93 (4%)

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW----SPQGDLIAFTKFSGEKFAIG 374
            +D E   +++ ++ +G+D + ++ D  +      +    SP    +A+    G      
Sbjct: 132 VNDYENGYKIWSVKIDGTDLRLVTDDIPSKASPQNYVTSRSPNNRYVAYAYSFGGPLIKA 191

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +   +  Q   L   S      W+     + FS
Sbjct: 192 IFDLETQQTIQLGSASTKPYLVWADDSSYIYFS 224



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 49/155 (31%), Gaps = 25/155 (16%)

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF-----------T 364
           IV+  D    E    +        R +++          S     I F            
Sbjct: 73  IVYSEDLSKPEYPGTLPVKPGYAVRRAKEWPREDLSDASSYDKPRIQFWWNNVKFNDPLV 132

Query: 365 KFSGEKFAIGVMKKDGSQERLLVED------SNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                 + I  +K DG+  RL+ +D            + SP+ R + ++    G     +
Sbjct: 133 NDYENGYKIWSVKIDGTDLRLVTDDIPSKASPQNYVTSRSPNNRYVAYAYSFGGPLIKAI 192

Query: 419 YSIDLNGRNETLINTPA------YASDPQWVGFMD 447
           +  DL  +    + + +      +A D  ++ F D
Sbjct: 193 F--DLETQQTIQLGSASTKPYLVWADDSSYIYFSD 225


>gi|163794794|ref|ZP_02188764.1| WD domain/cytochrome c family protein [alpha proteobacterium
           BAL199]
 gi|159180067|gb|EDP64592.1| WD domain/cytochrome c family protein [alpha proteobacterium
           BAL199]
          Length = 439

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/276 (13%), Positives = 89/276 (32%), Gaps = 32/276 (11%)

Query: 159 SDDIYQSITGEKGDFNSRILFVS-ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           + ++ + +TG  G      +  + + V +     S+ V        + +    D      
Sbjct: 22  AAELPEHLTGHGGPVKGITVAPAGDRVATASFDYSVIVRSWPSGVEQSILYGHDAAANAV 81

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----RIGNFRSMILAPRFSSNGKRAL 273
            F+P+ + +        D   V +  T      +    R+   +  IL    S +G    
Sbjct: 82  AFTPDGRHLVTV----GDDGLVLVWPTGGSGERREPLARLTGHQGKILQVAVSMDGG-LA 136

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
            +   D  + ++S++        L        +   S D +++ + +  +G  +L+ +  
Sbjct: 137 ATASWDGKVGLWSLNPP-APLAMLEGHQGPVNAVVLSDDGTRL-YSAGYDGTVRLWNVP- 193

Query: 334 NGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              +++ +       +   V +       + +    G    + V+     + R      +
Sbjct: 194 ---ERREVRTLVRHGFGINVIAVDEVAGQLTYGALDGG---MRVVDLASGEVR--TGFEH 245

Query: 392 LQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            + P      S  GR + F     GD    +  +D 
Sbjct: 246 DRTPILALAESHDGRRIAF-----GDGHGVVTVVDT 276


>gi|145521356|ref|XP_001446533.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414011|emb|CAK79136.1| unnamed protein product [Paramecium tetraurelia]
          Length = 423

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 40/293 (13%), Positives = 86/293 (29%), Gaps = 44/293 (15%)

Query: 122 DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVS 181
                  ++WD    +Q++  +            H   + +Y         F  R+    
Sbjct: 111 GSYDRTCKVWDTFTGEQLVSLE-----------GHK--NVVY--CIAFNNPFGDRVA--- 152

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
               +G    +  + D                +    F P+   VA  + D        L
Sbjct: 153 ----TGSFDKTAKIWDATSGKCLQTFVGHQYEIVCISFDPHSLLVATGSMDK----TARL 204

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +   R+      I++  ++S+G + L +   D+   I+  D++S     + +  
Sbjct: 205 WDVETGKQIARLDGHDGEIVSLHYNSDGDKLL-TGSFDKTAMIW--DVRSGECIHILDEH 261

Query: 302 FINISASYSPDSSQIVFESDREGKEQL----YVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              IS      S+Q  F  D      +     +            +  +    D  ++  
Sbjct: 262 TGEIS------STQFEFTGDYCATGSIDKTCKIWDIKTGKCIETLRGHQDEVQDICFNST 315

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPTWSPSGRSLIFSR 408
           G  +             +   +  Q   +LL     +    ++PSG  +I + 
Sbjct: 316 GTRLVTVSADATG---RLYNVNSGQCIAQLLGHKGEISKVAFNPSGNKIITAS 365


>gi|145494993|ref|XP_001433490.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400608|emb|CAK66093.1| unnamed protein product [Paramecium tetraurelia]
          Length = 323

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 37/274 (13%), Positives = 91/274 (33%), Gaps = 27/274 (9%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--FSP 221
           +  T +  D+N    +++ S  S     ++ +   DG NI+  T  +       +  F P
Sbjct: 21  ERKTIKSMDWNCNGSYLATSSDS-----TIKIWSFDGNNIKRSTDLKQGSEQLEKLLFHP 75

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            Q  +  +  ++     V + D R  ++ ++    +  +    +S NG    +  ++++ 
Sbjct: 76  TQPDIIASITNE----YVKIWDIRTKQSVRQ--EKKEQMGIACWSPNGNELAVGTKQNKE 129

Query: 282 MDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             I  +D+Q    + +      + +    +   D    V    + G   +  M       
Sbjct: 130 TQIMFLDMQGGERQIMYQPKDKDKNFELKNIMYDQDVFVAVGQQNGVGMIQFMDVTNPQL 189

Query: 339 KRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-VMKKDGSQERLLVEDSNLQAP 395
             + Q     A      +S  G    +T        +  +     + + + VE       
Sbjct: 190 PPLHQMEAHRAGITQCKFSKDGQH-MYTGAQDSLIILWQLPDLLCAGQLVTVESEIKSMS 248

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSID--LNGRN 427
            +    + +        +  + +Y +D  L G+ 
Sbjct: 249 VF--DSKYIA---AIGLEEQAYIYQVDRCLAGKT 277


>gi|73954017|ref|XP_537899.2| PREDICTED: similar to THO complex 3 [Canis familiaris]
          Length = 351

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 83/242 (34%), Gaps = 15/242 (6%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           SV SG  +  L + +   G +     P+    +    +S + +++A  ++D      V+L
Sbjct: 26  SVTSGPTRYVLGMQELFRGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFD--KTASVFL 83

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++                +    +  +     ++   D+ + I+  D+++       NT 
Sbjct: 84  LEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIW--DVRTTKCIATVNTK 141

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
             NI+  +SPD   I       G +   V   +    +  ++++     +   W+   ++
Sbjct: 142 GENINICWSPDGQTIAV-----GNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNM 196

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             F         I    +    + +    SN     + P G+   +      D    L+ 
Sbjct: 197 F-FLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGK---YFATGSADALVSLWD 252

Query: 421 ID 422
           +D
Sbjct: 253 VD 254



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 29/230 (12%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R    S DQ+ + P  +P+     + T   +  +R++  D R  +    + N +   +
Sbjct: 94  NYRGHGDSVDQLCWHPS-NPD----LFVTASGDKTIRIW--DVRTTKCIATV-NTKGENI 145

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +G+   +  + D    I +   +S A E+     F     S++ D++       
Sbjct: 146 NICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ---FKFEVNEISWNNDNNMFFLT-- 200

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G   + ++        +      ++     + P G   A          + +   D  
Sbjct: 201 -NGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADA---LVSLWDVD-- 254

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDG------DTGSKLYSI 421
           +   +   S L  P    ++S  G+ L  + +         +TG KL+ +
Sbjct: 255 ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEV 304


>gi|21231834|ref|NP_637751.1| peptidase [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66768039|ref|YP_242801.1| peptidase [Xanthomonas campestris pv. campestris str. 8004]
 gi|21113550|gb|AAM41675.1| peptidase [Xanthomonas campestris pv. campestris str. ATCC 33913]
 gi|66573371|gb|AAY48781.1| peptidase [Xanthomonas campestris pv. campestris str. 8004]
          Length = 780

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 50/399 (12%), Positives = 108/399 (27%), Gaps = 77/399 (19%)

Query: 80  NLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRV--IKEGKDRLRVEFRLWDVKDRK 137
            L+   S +      D           GA  +    +       ++  + F+L D+  + 
Sbjct: 92  RLVDAASGRNTPA-FDHARLAAALTQAGAHNVDAAALHLQDPALEQQTLRFQLADLGWQC 150

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           +++  ++  +    R +     D  +    GE+   +S            + + +L +  
Sbjct: 151 ELV--RYRCTHLPERDVRPESMDMSFPLKQGERYAKHS----PDGRWRVWVEQGNLLIAP 204

Query: 198 RDGANIRYLTPSRDQILFEP----RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK-- 251
             G     ++       F       +SP+ Q VA           VY +++      +  
Sbjct: 205 VGGGTPTAISDDGSASDFYAIDTVVWSPDSQHVAAYRVKAPPPHIVYYIESAPADRVQPK 264

Query: 252 -------------------------RIGNFRSMILAP--------RFSSNGKRALISVQK 278
                                    R      M L P        ++  + +        
Sbjct: 265 LHQQVYPKPGDPLPVMQPVLFDVATRTARPVDMTLLPNAFTLSELQWWKDSRGVTFEYNA 324

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASY---SP-----------------DSSQIVF 318
                   +++ +      T       S ++   SP                 D +Q+++
Sbjct: 325 RGHQLYRVIEVDAGTAVARTVIE--ETSPTFIEYSPLSGDNEDGGKYARHDLADGAQLLW 382

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------F 371
            S+R+G E LY+         R     E          +     +   SG +        
Sbjct: 383 ASERDGWEHLYLYDGRTGRVMRQVTRGEWVVRRLDHVDEAAGQVYFSASGMQPGEDPYYR 442

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
               +  DG+    L   +      +SP GR  +    +
Sbjct: 443 HAYRIGLDGTGLTALTPLAADHDVRYSPDGRWFLDLSSR 481


>gi|325002278|ref|ZP_08123390.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Pseudonocardia sp. P1]
          Length = 634

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 32/90 (35%), Gaps = 10/90 (11%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---------SQERLLVEDS-NL 392
                +    + SP G  +A+     E+  + V   D             R+  +   N+
Sbjct: 12  FFGPPTRSRALLSPDGTKVAYLAPWRERLNVFVRDVDSDWSTPGDDHGARRITSDTRRNV 71

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               WS  GR L+F +  DGD    L+  D
Sbjct: 72  DTFFWSVDGRYLLFQQDTDGDENWHLHRAD 101



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 8/78 (10%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGS--------DQKRISQDKEASYFDPVWSPQGDLI 361
           SPD +++ + +    +  ++V   +            +RI+ D   +     WS  G  +
Sbjct: 24  SPDGTKVAYLAPWRERLNVFVRDVDSDWSTPGDDHGARRITSDTRRNVDTFFWSVDGRYL 83

Query: 362 AFTKFSGEKFAIGVMKKD 379
            F + +       + + D
Sbjct: 84  LFQQDTDGDENWHLHRAD 101



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 43/249 (17%), Positives = 77/249 (30%), Gaps = 32/249 (12%)

Query: 220 SPNQQKVAYAT-------YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           SP+  KVAY             D+   +        A +   + R  +    +S +G+  
Sbjct: 24  SPDGTKVAYLAPWRERLNVFVRDVDSDWSTPGDDHGARRITSDTRRNVDTFFWSVDGRYL 83

Query: 273 LISVQKDE--AMDIYSVDLQSNATER--LTNTLFINISAS-YSPDSSQIVFE---SDREG 324
           L     D      ++  D +S+      LT    + +  +   PD     F      R  
Sbjct: 84  LFQQDTDGDENWHLHRADPESSDEPTADLTPFEGVRLLGTQLPPDRPGTAFVQLNRRRPE 143

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-VMKKDGSQE 383
              LY +         ++++               L+ FT        +      D +  
Sbjct: 144 LADLYELDLATGGLTLVAENPGDVLIWLRTVD--RLLVFTMEENGDHVLSEWADGDPTPI 201

Query: 384 RLLVE---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET--------LIN 432
               +     +  APT  P G  L     +  D  ++L  +DL    ET         ++
Sbjct: 202 ARFTDLLLGVSPIAPT--PDGSGLWIGSARGSDR-TRLARLDLATGEETGVDSHPVFDLD 258

Query: 433 TPAYASDPQ 441
           TP   +DP+
Sbjct: 259 TPRPEADPR 267


>gi|301308368|ref|ZP_07214322.1| Xaa-Pro dipeptidyl-peptidase [Bacteroides sp. 20_3]
 gi|300833838|gb|EFK64454.1| Xaa-Pro dipeptidyl-peptidase [Bacteroides sp. 20_3]
          Length = 804

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 61/180 (33%), Gaps = 22/180 (12%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESDREGK 325
           + +    S++       +S D  S+   R+T          A+ SPD  ++VF  D    
Sbjct: 119 DDRTFTFSIKGTNGNYFFSYDYPSSRLTRITKDEIPAKIRWANISPDKKRVVFAKD---- 174

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             LYVM     + K +   ++ +  +   +  G+           F  G+ +   + + L
Sbjct: 175 LNLYVMSYEDYE-KAVKNPEDKTISEIALTTDGEK---------DFGFGMPRTFLNTDTL 224

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-----PAYASDP 440
                      WSP GR    +   D      L+ I+   +    + T     P  A  P
Sbjct: 225 CDHKRKYVMGNWSPDGRYFA-ATLSDQRAVQDLWVINSIAKPRPTLETYKYQMPGEAGSP 283



 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 34/268 (12%), Positives = 82/268 (30%), Gaps = 20/268 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +   K+    M R   N   L   + + +    +SP+ +  A    D   +  ++++++ 
Sbjct: 204 TDGEKDFGFGMPRTFLNTDTLCDHKRKYVMG-NWSPDGRYFAATLSDQRAVQDLWVINSI 262

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL---- 301
               P  +  ++  +     S      L  ++         VD   +    L +      
Sbjct: 263 AKPRPT-LETYKYQMPGEAGSPIVHLYLFDLENAGKRKEIRVDCFKDQIINLASKPDKER 321

Query: 302 -FINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---VWS 355
             +  ++ +  D+        S    +  +          K I +++  +  +      +
Sbjct: 322 MGLTRNSIWLGDNQTFYLTRVSRDMKRVDICSYTIGEDSVKAIIEERLNTSMETRPLAMT 381

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG--RSLIFSRK--KD 411
             G  +           + +    G+ +  + +               R + F     + 
Sbjct: 382 DNGKELIHWSERDGWAHLYLYDAQGNLKNRITKGPWHVDAIVDVDSKNRVVYFKANAREK 441

Query: 412 GDTGS---KLYSIDLNGRNETLINTPAY 436
           GDT      LY ++L+G    LI TP  
Sbjct: 442 GDTTPYYEHLYRVNLDGSGLKLI-TPGD 468



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 71/233 (30%), Gaps = 38/233 (16%)

Query: 150 SWRKIAHTISD-------DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
             R  A T+SD        +  SI   +    +    +     S I+   L  ++  G  
Sbjct: 239 DGRYFAATLSDQRAVQDLWVINSIAKPRPTLETYKYQMPGEAGSPIVHLYLFDLENAGKR 298

Query: 203 IRYLTP---------------SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                                 R  +     +  + Q   Y T    D+ RV +    I 
Sbjct: 299 KEIRVDCFKDQIINLASKPDKERMGLTRNSIWLGDNQT-FYLTRVSRDMKRVDICSYTIG 357

Query: 248 RAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
               +      +  +          NGK  +   ++D    +Y  D Q N   R+T    
Sbjct: 358 EDSVKAIIEERLNTSMETRPLAMTDNGKELIHWSERDGWAHLYLYDAQGNLKNRITKGP- 416

Query: 303 INISASYSPDSSQIV--FESDREGK-------EQLYVMQSNGSDQKRISQDKE 346
            ++ A    DS   V  F+++   K       E LY +  +GS  K I+    
Sbjct: 417 WHVDAIVDVDSKNRVVYFKANAREKGDTTPYYEHLYRVNLDGSGLKLITPGDY 469



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 58/155 (37%), Gaps = 17/155 (10%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDR 322
           R S + KR  I         + ++       ERL     +     + + +  +++  S+R
Sbjct: 341 RVSRDMKRVDICSYTIGEDSVKAI-----IEERL--NTSMETRPLAMTDNGKELIHWSER 393

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-------AIGV 375
           +G   LY+  + G+ + RI++             +  ++ F   + EK         +  
Sbjct: 394 DGWAHLYLYDAQGNLKNRITKGPWHVDAIVDVDSKNRVVYFKANAREKGDTTPYYEHLYR 453

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSR 408
           +  DGS  +L+         +   S R ++  +SR
Sbjct: 454 VNLDGSGLKLITPGDYFHLVSMDKSMRYIVDNYSR 488


>gi|297156255|gb|ADI05967.1| hypothetical protein SBI_02846 [Streptomyces bingchenggensis BCW-1]
          Length = 391

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 47/295 (15%), Positives = 86/295 (29%), Gaps = 43/295 (14%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 G  + +      D    +Y       +   P       + A          RV 
Sbjct: 108 KTRKQGGAERTTYTWYLYDPGTQQYEKTDWGWVDVAP-----GMRRAAVLEKTLPASRVG 162

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI---------------- 284
           ++D    +  K I          ++S +GKR +++       DI                
Sbjct: 163 ILDMTTGKVTKWIPLEHK-AGGVQWSPDGKRLVVTT-YSGYPDIEALYGGEHTAPKRTGY 220

Query: 285 YSVDLQSNATERLT----NTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           Y VD+ S  T        ++  I  S      ++ D   ++      G  + +     G 
Sbjct: 221 YLVDVASGRTRYRPMDVDDSKAIVTSGRADVRWNRDGKLLLVPWPPGGAIETW-YDLKGQ 279

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             K+    +         SP G    +T   G    +    K+    R +   S      
Sbjct: 280 PSKKTPSYEGWDAPPAGLSPDGRY--YTVGDGWTATV----KETGTHRTVGPSSIGMTLA 333

Query: 397 WSPSGRSLIFSRKKD----GDTGSKLYSIDLNGRNETLINTPAYASDPQ-WVGFM 446
           W+ SGR + +  + D         +L   D  G  +  ++   Y+  PQ W   +
Sbjct: 334 WADSGRLVRWDCRPDHSCQRGDNERLVLTDPTGHIKIPLSGYRYSDTPQDWDPLI 388


>gi|297471985|ref|XP_002685607.1| PREDICTED: sperm associated antigen 16 [Bos taurus]
 gi|296490349|gb|DAA32462.1| sperm associated antigen 16 [Bos taurus]
          Length = 628

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 31/219 (14%), Positives = 67/219 (30%), Gaps = 27/219 (12%)

Query: 130 LWDVKDRKQII---GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF------- 179
           LWDV     I+   G        +W      ++     + +      + R  +       
Sbjct: 417 LWDVSKGNCILTFEGHTHAVWSCTWHSCGDFVASSSLDTTSKIWDVNSERCRYTLYGHTD 476

Query: 180 ---------VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
                     S ++++G    SL + D                + +  F+P    +A   
Sbjct: 477 SVNSIEFFPYSNTLLTGSADKSLSIWDARTGKCEQSLYGHMHSINDATFTPRGHMIASC- 535

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
            D   + +++     +      +G      +   F S+G+      Q      I+ +DL+
Sbjct: 536 -DACGVTKLWDFRKLLPMVSIDVGPSPGNEV--TFDSSGRVLA---QASGNGVIHLLDLK 589

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           S    +L        +  +S D   + F    +G  + +
Sbjct: 590 SGQIHKLMGHESEAHTVIFSRDGETL-FSGGSDGTIRTW 627


>gi|294777514|ref|ZP_06742965.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           vulgatus PC510]
 gi|294448582|gb|EFG17131.1| dipeptidyl peptidase IV N-terminal domain protein [Bacteroides
           vulgatus PC510]
          Length = 737

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/323 (12%), Positives = 95/323 (29%), Gaps = 81/323 (25%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPR------------FSPNQQKVAYATYDDED 235
            + N+L V   DG   +     +  +  +              +SP    +A+   D+  
Sbjct: 153 TLDNNLFVTTADGKTQQVTDEPKGIVCGQSVHRQEFGISKGTFWSPKGNLLAFYRMDESM 212

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAP-------------------------------R 264
           +     ++T    A      +    +                                  
Sbjct: 213 VTDYPQVNTSTRIATLEPDKYPMAGMTSHKVTVGIYNPETQKTVYLKAGDPTDRYFTNIS 272

Query: 265 FSSNGKRA-LISVQKDEAMDI-YSVDLQSNATERLTNTLFINISAS----------YSP- 311
           +S + K   +I + +D+   +    D ++     L N        +          + P 
Sbjct: 273 WSPDEKSVYVIELNRDQNHALLCCYDAETGEP--LKNNPLYEEEHTKYVEPQHPIVFLPW 330

Query: 312 DSSQIVFESDREGKEQLYVMQSNGS------------------DQKRISQDKEASYFDPV 353
           D ++ +++S R+G   LY+M +  S                    ++++Q          
Sbjct: 331 DHTKFIYQSQRDGYNHLYLMDTKTSVYPESHGAAAGGSYRESYKTRQLTQGNWVVQNILG 390

Query: 354 WSPQGD--LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSRK 409
           ++ +    +I  T+ S  +     +     + RL+     +     S SG  +I  ++  
Sbjct: 391 FNEKTKEVIIMSTEVSPLQSNAYAVNVKTGKRRLIGNKDGMHHVQLSGSGNYVIDNYTSF 450

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
                  ++      G+  +L+ 
Sbjct: 451 TI-PRNIEIVPTSGKGKTISLLT 472


>gi|290992416|ref|XP_002678830.1| WD40 domain-containing protein [Naegleria gruberi]
 gi|284092444|gb|EFC46086.1| WD40 domain-containing protein [Naegleria gruberi]
          Length = 548

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 43/111 (38%), Gaps = 5/111 (4%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           +          + +    FSPN +++A  + D  + +R++ ++T   +    +    S +
Sbjct: 169 SRCTSTLEGHSEAILSVNFSPNGEQLATGSGD--NTVRIWDLNTETPQHT--LKGHESWV 224

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           L   +S + K+   S  KD  + I+  D      + L          S+ P
Sbjct: 225 LCVAWSPDAKKLA-SGSKDCNIKIWYGDSGKKCGKVLKGHKKWITGLSWEP 274



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 57/144 (39%), Gaps = 13/144 (9%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             +        +D   +    ++ D+   R+   + ++   +FS +G+    S   D+ +
Sbjct: 401 GSQPIRIITGSDDNTLILWEPSKSDKPIARLTGHKGVVNQVKFSPDGRLIA-SASFDKTI 459

Query: 283 DIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            ++  D Q+      +   +       +S D S+++  + ++   +++ +      ++++
Sbjct: 460 KLW--DAQTGKYLCSMRGHVGAVYQCCWSGD-SRLLLSASKDSTAKVWDV-----QKRQL 511

Query: 342 SQDKEASY---FDPVWSPQGDLIA 362
             D    Y   F   WSP GD  A
Sbjct: 512 LNDMPGHYDEVFAVDWSPGGDKAA 535



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 61/155 (39%), Gaps = 19/155 (12%)

Query: 183 SVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
            +++G   N+L + +   ++           ++ + +FSP+ + +A A++D      + L
Sbjct: 406 RIITGSDDNTLILWEPSKSDKPIARLTGHKGVVNQVKFSPDGRLIASASFDK----TIKL 461

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-- 299
            D +  +    +      +    +S +  R L+S  KD    ++ V        +L N  
Sbjct: 462 WDAQTGKYLCSMRGHVGAVYQCCWSGD-SRLLLSASKDSTAKVWDV-----QKRQLLNDM 515

Query: 300 -TLFINISAS-YSPDSSQIVFESDREGKEQLYVMQ 332
              +  + A  +SP   +        GK+++  + 
Sbjct: 516 PGHYDEVFAVDWSPGGDKAA----SGGKDRMLKIW 546



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 3/55 (5%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           ++SP+  Q+   S   G   + +   N    +   +  E+      WSP    +A
Sbjct: 186 NFSPNGEQLATGS---GDNTVRIWDLNTETPQHTLKGHESWVLCVAWSPDAKKLA 237



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 37/105 (35%), Gaps = 9/105 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G   N++ + D +    ++     +  +    +SP+ +K+A  +   +D          
Sbjct: 196 TGSGDNTVRIWDLNTETPQHTLKGHESWVLCVAWSPDAKKLASGS---KDCNIKIWYGDS 252

Query: 246 IDRAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDIY 285
             +  K +   +  I    +         KR   S  KD  + I+
Sbjct: 253 GKKCGKVLKGHKKWITGLSWEPFLKNTACKRLA-SCSKDGTIIIW 296


>gi|255645285|gb|ACU23139.1| unknown [Glycine max]
          Length = 345

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 81/263 (30%), Gaps = 25/263 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            S   +  L  +  D  N   +       + +  ++ +  ++  A+ D      V   D 
Sbjct: 73  GSHDREIFLWNVHGDCKN-FMVLKGHKNAVLDLHWTTDGTQIVSASPDK----TVRAWDV 127

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
              +  K++    S + +   S  G   ++S   D    ++ +  + +     T      
Sbjct: 128 ETGKQIKKMVEHLSYVNSCCPSRRGPPLVVSGSDDGTAKLWDMRQRGSIQ---TFPDKYQ 184

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           I+A    D+S  +F    +    + +      +     Q  +    D   SP G  +  T
Sbjct: 185 ITAVGFSDASDKIFTGGID--NDVKIWDLRKGEVTMTLQGHQDMITDMQLSPDGSYLL-T 241

Query: 365 KFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPT------WSPSGRSLIFSRKKDGDTGS 416
                K  I  M+    Q R   ++E              WSP G  +       G +  
Sbjct: 242 NGMDCKLCIWDMRPYAPQNRCVKVLEGHQHNFEKNLLKCGWSPDGSKV-----TAGSSDR 296

Query: 417 KLYSIDLNGRNETLINTPAYASD 439
            +Y  D   R   L   P +   
Sbjct: 297 MVYIWDTTSR-RILYKLPGHNGS 318


>gi|198437851|ref|XP_002131200.1| PREDICTED: similar to WD40 repeat-containing protein SMU1 (Smu-1
           suppressor of mec-8 and unc-52 protein homolog) [Ciona
           intestinalis]
          Length = 513

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 62/174 (35%), Gaps = 18/174 (10%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--------- 307
           +S +   RFS +G+  + +   D  ++++  +  +    +       +            
Sbjct: 215 KSHVECARFSPDGQYLV-TGSVDGFIEVW--NFATGKIRKDLQFQAQDRFMMMEEAVLCL 271

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++S DS  +    D+EGK +++ M + G   +R  +          +S  G  +    F 
Sbjct: 272 AFSRDSEMLA-SGDQEGKIKVWKMST-GQCLRRFERAHTKGVTSVSFSKDGSQVLSASFD 329

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                 G+      +E      S +    +   G  +I +     D   K++++
Sbjct: 330 QTIKVHGLKSGKTLKEMR-GHSSFVNEAVFMLDGHHVISASS---DGNVKIWNV 379


>gi|171676740|ref|XP_001903322.1| hypothetical protein [Podospora anserina S mat+]
 gi|170936437|emb|CAP61094.1| unnamed protein product [Podospora anserina S mat+]
          Length = 161

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 8/124 (6%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +SPDS  I   SD      + +        ++  +    S    V+SP    IA      
Sbjct: 1   FSPDSKWIASGSD---DHTIKIWNLETGSCQQTLEGHSDSVRSVVFSPDSKWIA---SGS 54

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSP--SGRSLIFSRKKDGDTGSKLYSIDLNGR 426
               I +   +    +  +E  +    + +   +   + F          + Y I  + R
Sbjct: 55  GDRTIKIWNLETGSCQQTLEGHSSSVRSVASSLNSTLIAFRSDNANAPHYEHYGISSDYR 114

Query: 427 NETL 430
             T 
Sbjct: 115 WITR 118



 Score = 43.9 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 53/135 (39%), Gaps = 9/135 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + +A  + D      + + +       + +      + +  FS + K    S   
Sbjct: 1   FSPDSKWIASGSDDH----TIKIWNLETGSCQQTLEGHSDSVRSVVFSPDSKWIA-SGSG 55

Query: 279 DEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D  + I+  +L++ + ++ L        S + S +S+ I F SD       Y      SD
Sbjct: 56  DRTIKIW--NLETGSCQQTLEGHSSSVRSVASSLNSTLIAFRSDNANAPH-YEHYGISSD 112

Query: 338 QKRISQDKEASYFDP 352
            + I++  +   + P
Sbjct: 113 YRWITRASKNWLWLP 127


>gi|149924875|ref|ZP_01913210.1| hypothetical protein PPSIR1_27878 [Plesiocystis pacifica SIR-1]
 gi|149814249|gb|EDM73856.1| hypothetical protein PPSIR1_27878 [Plesiocystis pacifica SIR-1]
          Length = 349

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 67/210 (31%), Gaps = 29/210 (13%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSP-------------NQQKVAYATYDDEDILRV 239
           +  +D DG  + +     +  +   R+ P             +   + Y   D    L  
Sbjct: 145 ITTLDGDGGLLLFEHEDGELAMRHYRWRPPEPGRALVVEISRDGSWIVYGGADGTVHLFN 204

Query: 240 YLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALISVQKDEAMDI-YSVDLQS------ 291
            L    + R          +  +A   S +G+   ++V   +A  I Y  +         
Sbjct: 205 RLTLIAMQRPIWSYPLVEGLAPVAVALSPDGEHVAVAVDSGDAGKIYYLANRNGAPHLEW 264

Query: 292 -NATERLTNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSDQKRISQDKEASY 349
              T R    + I+  +++       V ++D R    Q Y+ +++       +     + 
Sbjct: 265 SKQTRRPPTGMVIDGDSTWV-----AVVDADPRGNGGQCYLFEADSGLIAG-AYRSPGAC 318

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           +    S  G  +      G   +I ++K D
Sbjct: 319 WTVALSGDGTRMLVGSDDGTAASIKIIKPD 348


>gi|152985206|ref|YP_001346005.1| putative c-type cytochrome [Pseudomonas aeruginosa PA7]
 gi|150960364|gb|ABR82389.1| probable c-type cytochrome [Pseudomonas aeruginosa PA7]
          Length = 493

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 42/242 (17%), Positives = 89/242 (36%), Gaps = 25/242 (10%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           PRF  +   +       +  + +  +D        R  +  ++   P+FS +G+  +   
Sbjct: 124 PRFQADPLNLFVVVESGDHHVSI--LDGDRFAPIARFPSRYALHGGPKFSPDGR-LVYFA 180

Query: 277 QKDEAMDIY-SVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSN 334
            +D  + +Y   +L+  A  R      +N  + + S D   ++  +   G   L ++ + 
Sbjct: 181 SRDGWVTLYDLYNLEVVAEVR----AGLNTRNLAVSDDGRWVLVGNYLPGN--LVLLDAR 234

Query: 335 GSDQKRISQDKEASYFDPVWS------PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                 +    +A       S      P+   +   K   E + +          + L  
Sbjct: 235 DLSLVAVLPAADAQGQPSRVSAVYTAPPRHSFVVALKDVHELWELPYANGKPVAPKRLAV 294

Query: 389 DSNLQAPTWSPSGRSLIFSRK--KDG-----DTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              L   ++SP  R L+ S +  + G     D+G+++ SI L+G    L +   +  D +
Sbjct: 295 ADYLDDFSFSPDYRYLLGSSRQARGGEVIELDSGARVASIPLSGMPH-LGSGIYWKRDGR 353

Query: 442 WV 443
           WV
Sbjct: 354 WV 355


>gi|38196020|gb|AAR13700.1| WD-repeat protein [Brassica oleracea]
          Length = 458

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 81/240 (33%), Gaps = 31/240 (12%)

Query: 143 KFFSSPASWRKIA-HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC----VMD 197
           ++ +    +R +   T S  + Q  +        RI ++  ++ S  I   L     +  
Sbjct: 20  RYVAVANDYRLVIRDTFSFQVVQLFS-----CLDRISYIEWALDSEYILCGLYKKPMIQA 74

Query: 198 RDGANIRYLTPSRDQI--LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                  +     +    +   R+SP+ + +   +   E  LR+ +              
Sbjct: 75  WSLTQPEWTCKIDEGPAGVSYARWSPDSRHILTTS---EFQLRLTVWSLLNTACVHVQWP 131

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSP 311
                    F+ +GK A I  ++D    +  +  QS     +  +  ++        +SP
Sbjct: 132 KHGSK-GVSFNKDGKFAAICTRRDCKDYVNLLSCQS---WEIMGSFAVDTLDLADLEWSP 187

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFS 367
           D S IV   D   + ++ +   +G   + + + +       V    WSP G  +A   + 
Sbjct: 188 DDSSIV-VWDSPLEYKVLIYSPDG---RCLFKYQAYECGLGVKTVSWSPCGQFLAIGSYD 243



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 63/197 (31%), Gaps = 11/197 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++ + +   Y          +            +I    + +   R+S + +  L + + 
Sbjct: 55  WALDSE---YILCGLYKKPMIQAWSLTQPEWTCKIDEGPAGVSYARWSPDSRHILTTSEF 111

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              + ++S+ L +     +        +S  ++ D       + R+ K+ + ++     +
Sbjct: 112 QLRLTVWSL-LNTACVHVQWPKHGSKGVS--FNKDGKFAAICTRRDCKDYVNLLSCQSWE 168

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQA 394
                        D  WSP    I     S  ++ + +   DG    + +       ++ 
Sbjct: 169 IMGSFAVDTLDLADLEWSPDDSSIV-VWDSPLEYKVLIYSPDGRCLFKYQAYECGLGVKT 227

Query: 395 PTWSPSGRSLIFSRKKD 411
            +WSP G+ L       
Sbjct: 228 VSWSPCGQFLAIGSYDQ 244


>gi|147900810|ref|NP_001090004.1| eukaryotic translation initiation factor 3 subunit B [Xenopus
           laevis]
 gi|82230022|sp|Q569Z1|EIF3B_XENLA RecName: Full=Eukaryotic translation initiation factor 3 subunit B;
           Short=eIF3b; AltName: Full=Eukaryotic translation
           initiation factor 3 subunit 9; AltName: Full=eIF-3-eta
 gi|62185616|gb|AAH92246.1| Eif3b protein [Xenopus laevis]
          Length = 688

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 79/220 (35%), Gaps = 22/220 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD- 279
           P+ +      Y+  D   ++  D +     +    +    +  R+S  G       Q+  
Sbjct: 176 PDCRDQFSVIYESGDRTSIFWTDVKEPVPVEERARWTETYV--RWSPKGTYLATFHQRGI 233

Query: 280 ---EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQ- 332
                     +   S+   +L +         +SP    +V  S   D + + Q  ++  
Sbjct: 234 ALWGGEKFKQIQRFSHQGVQLID---------FSPCERYLVTFSPLMDTKEEPQAIIIWD 284

Query: 333 -SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              G +++    +  A +    WS  G    F + + +  +I      G  ++  ++ + 
Sbjct: 285 ILTGHNKRGFHCESSAHWPIFKWSHDGKF--FARMTLDTLSIYETPSMGLLDKKSLKITG 342

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           ++  +WSP G  + F   +D D  +++  + +  R E  +
Sbjct: 343 IKDFSWSPGGNIIAFWVPEDKDIPARVTLMQMPTRQEIRV 382



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 33/200 (16%), Positives = 67/200 (33%), Gaps = 15/200 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISV 276
            +SP    +A+   +D+DI     +     R   R+ N  +++     +  NG    + V
Sbjct: 347 SWSPGGNIIAFWVPEDKDIPARVTLMQMPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKV 406

Query: 277 QKDE--------AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
            +            +I+ +  +    + +     I I+ ++ P+ S+  F        ++
Sbjct: 407 DRTPKGTQGMVTNFEIFRMREKQVPVDVVEMKDGI-IAFAWEPNGSK--FAVLHGEVPRI 463

Query: 329 YVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            V      N    + I    +       WSPQG  +          A+  +         
Sbjct: 464 SVSFYHVKNNGKIELIKMYDKQQANTIFWSPQGQFLVLAGLRSMNGALAFVDTSDCTIMN 523

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
           + E        W P+GR +I
Sbjct: 524 IAEHYTASDVEWDPTGRYVI 543



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 43/282 (15%), Positives = 91/282 (32%), Gaps = 26/282 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDE 234
           V+ S +    +    ++  D   G N R            P  ++S + +  A  T D  
Sbjct: 265 VTFSPLMDTKEEPQAIIIWDILTGHNKRGFHCESS--AHWPIFKWSHDGKFFARMTLDTL 322

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--VDLQSN 292
            I     M   +D+   +I   +       +S  G      V +D+ +      + + + 
Sbjct: 323 SIYETPSMGL-LDKKSLKITGIKDF----SWSPGGNIIAFWVPEDKDIPARVTLMQMPTR 377

Query: 293 ATERLTN-TLFINISASYSPDSSQIVFESDRE--GKEQLY----VMQSNGSDQKRISQDK 345
              R+ N    ++    +  +   +  + DR   G + +     + +           + 
Sbjct: 378 QEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQGMVTNFEIFRMREKQVPVDVVEM 437

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAI--GVMKKDGSQERL-LVEDSNLQAPTWSPSGR 402
           +       W P G   A       + ++    +K +G  E + + +        WSP G+
Sbjct: 438 KDGIIAFAWEPNGSKFAVLHGEVPRISVSFYHVKNNGKIELIKMYDKQQANTIFWSPQGQ 497

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            L+ +  +       L  +D +      I     ASD +W  
Sbjct: 498 FLVLAGLRS--MNGALAFVDTSDCTIMNIAEHYTASDVEWDP 537


>gi|309812332|ref|ZP_07706087.1| peptidase, S9A/B/C family, catalytic domain protein [Dermacoccus
           sp. Ellin185]
 gi|308433637|gb|EFP57514.1| peptidase, S9A/B/C family, catalytic domain protein [Dermacoccus
           sp. Ellin185]
          Length = 699

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 67/201 (33%), Gaps = 23/201 (11%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRAL-ISVQKDEAMDIYSVDLQS------NATE--RL 297
            RAP R       +  P  S +G+    + V++D       + L              RL
Sbjct: 24  HRAPPRPRTLDRYVKDPALSPDGRLLACVVVEQDRFPFALQMPLDDDGVPIVGEEREVRL 83

Query: 298 TNTLFINISASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
                +     YSPD   +  E   +G  +EQ++ + S+  D    + D  A     + S
Sbjct: 84  PVEGGV-RRVLYSPDGHWLACEVAPDGGDREQIWFVTSDPDDANSYTVDLAAYETVELVS 142

Query: 356 PQGDLIAFTKF-SGEKFAIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKD 411
              D +A + F         +      + R++      +   +      G   +F  +  
Sbjct: 143 WDDDFVAVSVFDREGTVEGRLFNPVTGETRVVDRRTGGALTHS-----RGNVSLF--RVG 195

Query: 412 GDTGSKLYSIDLNGRNETLIN 432
                +L +ID +G    L+ 
Sbjct: 196 SRGNRELLAIDDDGTWRPLMP 216



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 63/193 (32%), Gaps = 38/193 (19%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP-----------------KRI 253
           D+ + +P  SP+ + +A    + +       M    D  P                 + +
Sbjct: 34  DRYVKDPALSPDGRLLACVVVEQDRFPFALQMPLDDDGVPIVGEEREVRLPVEGGVRRVL 93

Query: 254 GNFRSMILAPRFSSNG---KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            +     LA   + +G   ++        +  + Y+VDL +  T  L          S+ 
Sbjct: 94  YSPDGHWLACEVAPDGGDREQIWFVTSDPDDANSYTVDLAAYETVELV---------SWD 144

Query: 311 PDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            D    V  S  DREG  +  +      + + + +    +        +G++  F   S 
Sbjct: 145 DD---FVAVSVFDREGTVEGRLFNPVTGETRVVDRRTGGALTHS----RGNVSLFRVGSR 197

Query: 369 EKFAIGVMKKDGS 381
               +  +  DG+
Sbjct: 198 GNRELLAIDDDGT 210



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/215 (13%), Positives = 67/215 (31%), Gaps = 24/215 (11%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
             G  +  +  +  D  +    T            S +   VA + +D E  +   L + 
Sbjct: 107 PDGGDREQIWFVTSDPDDANSYTVDLAAYETVELVSWDDDFVAVSVFDREGTVEGRLFNP 166

Query: 245 RIDRAPKR-------IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                          + + R  +   R  S G R L+++  D       + + + +    
Sbjct: 167 VTGETRVVDRRTGGALTHSRGNVSLFRVGSRGNRELLAIDDDG-TWRPLMPVDNGS---- 221

Query: 298 TNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSD----QKRISQDKEASYFD 351
           T             D  +  F   SD    E+  +++   ++     + + + ++A   +
Sbjct: 222 TTDRGFVTF-----DGDRPSFIVRSDHS-AERFRLLRLTPTEHAHDVEVLLEREDADVEE 275

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
              S  G + A          + ++   G + R++
Sbjct: 276 FAVSLDGSVAAVLWNDEGWCDLQIVDLTGGRARVV 310


>gi|298231102|ref|NP_001177202.1| autophagy-related protein 16-1 isoform 2 [Sus scrofa]
 gi|296874480|gb|ADH81745.1| autophagy related 16-like protein 1 transcript variant 2 [Sus
           scrofa]
          Length = 588

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 60/323 (18%), Positives = 111/323 (34%), Gaps = 55/323 (17%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 312 SPGSRLLATG-----GMDR---RVKLWEVFGDKCEFKGSLSGSNAGITSIEF---DSAGS 360

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 361 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 402

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      +   D R     K +    S           ++ ++S   D+ +  
Sbjct: 403 RIVSGSHDR----TLKHWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 454

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +  ++P+ ++++  S     + L ++     +  R +  
Sbjct: 455 W--DIRSESIVREMELLGKITALDFNPERTELLSCSR---DDLLKIIDLR-INAVRQTFS 508

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S + A  W
Sbjct: 509 VPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSV--LSGKVEKVLSKHHSSPINAVAW 566

Query: 398 SPSGRSLIFSRKKDGDTGSKLYS 420
           SPSG  +      D  + + L+S
Sbjct: 567 SPSGAHVA---SVDKGSKAVLWS 586


>gi|298228972|ref|NP_001177201.1| autophagy-related protein 16-1 isoform 1 [Sus scrofa]
 gi|296874478|gb|ADH81744.1| autophagy related 16-like protein 1 transcript variant 1 [Sus
           scrofa]
          Length = 607

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 60/323 (18%), Positives = 111/323 (34%), Gaps = 55/323 (17%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG     G DR     +LW+V   K         S A    I     D    
Sbjct: 331 SPGSRLLATG-----GMDR---RVKLWEVFGDKCEFKGSLSGSNAGITSIEF---DSAGS 379

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +     DF SRI  V                  D   +R+        +   +F  +  
Sbjct: 380 YLLAASNDFASRIWTV------------------DDYRLRHTLTGHSGKVLSAKFLLDNA 421

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
           ++   ++D      +   D R     K +    S           ++ ++S   D+ +  
Sbjct: 422 RIVSGSHDR----TLKHWDLRSKVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRF 473

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +  D++S +  R    L    +  ++P+ ++++  S     + L ++     +  R +  
Sbjct: 474 W--DIRSESIVREMELLGKITALDFNPERTELLSCSR---DDLLKIIDLR-INAVRQTFS 527

Query: 345 KEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTW 397
                    +   V+SP G  +A     G  +   V    G  E++L     S + A  W
Sbjct: 528 VPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSV--LSGKVEKVLSKHHSSPINAVAW 585

Query: 398 SPSGRSLIFSRKKDGDTGSKLYS 420
           SPSG  +      D  + + L+S
Sbjct: 586 SPSGAHVA---SVDKGSKAVLWS 605


>gi|290972865|ref|XP_002669171.1| predicted protein [Naegleria gruberi]
 gi|284082714|gb|EFC36427.1| predicted protein [Naegleria gruberi]
          Length = 732

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 12/94 (12%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDS 313
           +     S +G+ A+ SV++  +        +  +++QS    R       + S  ++PD 
Sbjct: 50  VSGASVSVDGRYAVYSVKQWSSKTGKSTSVLELLEIQSGKIIRF-KEGSNDFSPKFTPDG 108

Query: 314 SQIVFESDREG---KEQLYVMQSNGSDQK--RIS 342
             I+F S   G     QLY +  NG + +  R++
Sbjct: 109 QFILFLSTSRGSANSPQLYSVPVNGDESQIARLT 142



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 350 FDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
                S  G    ++      K       + +++    +     E SN  +P ++P G+ 
Sbjct: 51  SGASVSVDGRYAVYSVKQWSSKTGKSTSVLELLEIQSGKIIRFKEGSNDFSPKFTPDGQF 110

Query: 404 LIFSRKKDGDTGS-KLYSIDLNGRNETL 430
           ++F     G   S +LYS+ +NG    +
Sbjct: 111 ILFLSTSRGSANSPQLYSVPVNGDESQI 138



 Score = 36.9 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 8/91 (8%)

Query: 218 RFSPNQQKVAYA--TYDDEDILRVYLMDTRIDRAPKRIGNFRSMI-LAPRFSSNGKRALI 274
             S + +   Y+   +  +      +++    ++ K I         +P+F+ +G+  L 
Sbjct: 54  SVSVDGRYAVYSVKQWSSKTGKSTSVLELLEIQSGKIIRFKEGSNDFSPKFTPDGQFILF 113

Query: 275 -SVQKDEA--MDIYSVDLQS--NATERLTNT 300
            S  +  A    +YSV +    +   RLT+ 
Sbjct: 114 LSTSRGSANSPQLYSVPVNGDESQIARLTDY 144


>gi|226311638|ref|YP_002771532.1| hypothetical protein BBR47_20510 [Brevibacillus brevis NBRC 100599]
 gi|226094586|dbj|BAH43028.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 377

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/195 (13%), Positives = 60/195 (30%), Gaps = 29/195 (14%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---ISVQKDEAMDIYSVD 288
           D      V +    +D    +     ++I     S +G+      I   K +    Y  D
Sbjct: 32  DPRKPEPVVIYQVPVDGKVTKTVTNMTLIHRASMSPSGRFVYGERIGYGKTDRTIPYLYD 91

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           +Q+    +L+          +SP    +     RE    + +   +G     +    +  
Sbjct: 92  MQTKKMTQLSGY------GKWSPKQDALY---VRENGGIVKLSLPDGKKTVLVPAAAQYP 142

Query: 349 YFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQERLLVEDSNLQAPT------ 396
             D   SP    + FT+       S     + +      + +   ++   + P+      
Sbjct: 143 VLDFSVSPDEQYMVFTRMDMLSSNSKVSGHLILQHLPTLKMK---KNDQYEWPSGTEEER 199

Query: 397 --WSPSGRSLIFSRK 409
             W P+ + L +  +
Sbjct: 200 YYWVPNSKKLFYKTQ 214


>gi|194378804|dbj|BAG63567.1| unnamed protein product [Homo sapiens]
          Length = 441

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 11/88 (12%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPT 396
           S D         +SP G+  A     G    I +      ++          D  + A +
Sbjct: 20  SVDHSRFVNCVRFSPDGNRFATASADG---QIYIYDGKTGEKVCALGGSKAHDGGIYAIS 76

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           WSP    L+      GD  SK++ + +N
Sbjct: 77  WSPDSTHLL---SASGDKTSKIWDVSVN 101



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRALI 274
           RFSP+  + A A+ D     ++Y+ D +       +G  +     I A  +S +    L 
Sbjct: 31  RFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLL- 85

Query: 275 SVQKDEAMDIYSVDLQS 291
           S   D+   I+ V + S
Sbjct: 86  SASGDKTSKIWDVSVNS 102


>gi|204929979|ref|ZP_03221000.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204320973|gb|EDZ06174.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 331

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 71/235 (30%), Gaps = 18/235 (7%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +    
Sbjct: 2   KQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRFL 61

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPD-SSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
            Y +     A         +  S +  S D   + VF  S   G   + V +        
Sbjct: 62  AYRIAPDDGALT-FAAESALPGSPTHISTDHHGRFVFVGSYNAGN--VSVTRLQDGLPVE 118

Query: 341 ISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNL 392
           +    E          +P    +       ++  +  +  DG        E   VE +  
Sbjct: 119 LVDVVEGLDGCHSANITPDNRTLWVPALKQDRICLFTLSDDGHLVAQEPAEVNTVEGAGP 178

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
           +   + P+ R   +   +   +       + +G  E   TL   PA  SD +W  
Sbjct: 179 RHMVFHPN-RQYAYCVNELNSSVDVWQLKNPHGEIECVQTLDMMPADFSDTRWAA 232


>gi|153868090|ref|ZP_01998194.1| WD-40 repeat protein [Beggiatoa sp. SS]
 gi|152144590|gb|EDN71806.1| WD-40 repeat protein [Beggiatoa sp. SS]
          Length = 305

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 69/227 (30%), Gaps = 15/227 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    +L + +                ++   FS + +     ++D+     + L + +
Sbjct: 52  SGSWDKTLKLWEVQSGREIRTFKGHSNFVWAVAFSNDGRLALSGSWDN----TLKLWEVQ 107

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL---QSNATERLTNTLF 302
             R  +        + A   S++G R  +S         +++ L   QS    R      
Sbjct: 108 SGREIRTFKGHSESVYAVALSNDG-RLALSGSGSIFGYEHTLKLWEVQSGREIRTFKGHS 166

Query: 303 INISA-SYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            N++A + S D    +  S         L + +     + R  +    S      S  G 
Sbjct: 167 SNVNAVALSNDGRLALSGSGSLFGDDNTLKLWELQSGREIRTFKGHSGSVNAVALSNDGR 226

Query: 360 LIAFTKFS--GEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGR 402
           L      S  G    + + +    +E          + A   S  GR
Sbjct: 227 LALSGSGSLFGGDNTLKLWELQSGREIRTFKGHSFRVSAVALSNDGR 273


>gi|124512250|ref|XP_001349258.1| receptor for activated C kinase homolog, PfRACK [Plasmodium
           falciparum 3D7]
 gi|23499027|emb|CAD51107.1| receptor for activated C kinase homolog, PfRACK [Plasmodium
           falciparum 3D7]
          Length = 323

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/204 (15%), Positives = 69/204 (33%), Gaps = 12/204 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +       Q + +   S +       ++D      V L D  +    +      S + +
Sbjct: 64  AKKSLTGHSQAINDVSISSDGLFALSGSWDH----SVRLWDLSLGETIRSFIGHTSDVFS 119

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFES 320
             FS + ++ + S  +D+ + +++   Q   T  +T+    +      +SP  +Q +  S
Sbjct: 120 VSFSPDNRQIV-SASRDKTIKLWNTLAQCKYT--ITDQQHTDWITCVRFSPSPNQAIIVS 176

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                + + V      D  +  +           SP G L A +        +  +K +G
Sbjct: 177 C-GWDKLVKVWNLKNCDLNKNLEGHTGVLNTVTISPDGSLCA-SGGKDGVAKLWDVK-EG 233

Query: 381 SQERLLVEDSNLQAPTWSPSGRSL 404
                L   S + +  +SP    L
Sbjct: 234 KHLYSLETGSTINSLCFSPCDYWL 257


>gi|91777659|ref|YP_552867.1| hypothetical protein Bxe_B2474 [Burkholderia xenovorans LB400]
 gi|91690319|gb|ABE33517.1| WD-40 repeat-containing protein [Burkholderia xenovorans LB400]
          Length = 364

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 68/197 (34%), Gaps = 21/197 (10%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
           ++   ++ ++D +  R  + + +         FS +G   L++ + D+ + +Y   +++ 
Sbjct: 152 NKPPAQIAIVDMKTWRVIRSVTSGHETEGI-EFSRDGNMMLVTNEGDDTVSVY--HVRTG 208

Query: 293 ATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
           A  R T  L           SPD    V   +     +  V+ +      + + D +   
Sbjct: 209 APVR-TVKLVAGGRPRGIRLSPDGKDYVVTLES--LSKFVVIDARTYQVTK-TVDTKLGP 264

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIF 406
           +   + P G  +           +     DG     L +          +++P G  L+ 
Sbjct: 265 YGVAFGPDGKRLFVAAARDRTVQVF----DGHSYEHLADVPVGQRCWHFSFTPDGAKLLV 320

Query: 407 SRKKDGDTGSKLYSIDL 423
           +  +       +Y +D 
Sbjct: 321 ACGRS----DAVYVLDA 333



 Score = 40.0 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 51/143 (35%), Gaps = 12/143 (8%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           R GA +R +           R SP+ +            + +   D R  +  K +    
Sbjct: 206 RTGAPVRTVKLVAGGRPRGIRLSPDGKDYVVTLESLSKFVVI---DARTYQVTKTVDTKL 262

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQ 315
                  F  +GKR  ++  +D  + ++      ++ E L +          S++PD ++
Sbjct: 263 GP-YGVAFGPDGKRLFVAAARDRTVQVF----DGHSYEHLADVPVGQRCWHFSFTPDGAK 317

Query: 316 IVFESDREGKEQLYVMQSNGSDQ 338
           ++    R   + +YV+ +     
Sbjct: 318 LLVACGRS--DAVYVLDAQSYQP 338


>gi|50548297|ref|XP_501618.1| YALI0C08877p [Yarrowia lipolytica]
 gi|49647485|emb|CAG81921.1| YALI0C08877p [Yarrowia lipolytica]
          Length = 561

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 54/300 (18%), Positives = 101/300 (33%), Gaps = 29/300 (9%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           + +      G F        +   SG  K +L V +    +       + Q  +  +++ 
Sbjct: 75  VLEIGFSPLGSFIITWEIPKKDPASGNFKPNLKVFNSKTGDHVQSFVQKSQTGWNLQYTF 134

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKR---ALISVQ 277
           +++   Y     +D ++ +  D       K R+ N     ++P     GK    A+   +
Sbjct: 135 DEK---YCARMVKDEIQFFESDVLTKVWAKLRVENCADFSVSP-----GKNYSVAVFVPE 186

Query: 278 KDEAM---DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF----ESDREGKE---- 326
           K        IY V   + A  + T      +   ++   + ++      SD  G+     
Sbjct: 187 KKGLPAKVQIYHVPNFNQAVAQKTFFKAEEVGLKWNALGTSLLVLAQTASDATGRSYYGE 246

Query: 327 -QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             LY++   G+   RI+ DKE    D  WSP     A   +             G++   
Sbjct: 247 TTLYLLGITGAFDSRITLDKEGPIHDVAWSPNSREFAVV-YGYMPSKTTFFDARGNEIHT 305

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-PAYASDPQWVG 444
           L E S      +SP GR ++      G+    +  +D   +   +     A AS   W  
Sbjct: 306 LAECSRNTI-RFSPHGRLVLLGGF--GNIQGAVDILDRQSKFAKVATLHAANASHVAWSP 362



 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 55/153 (35%), Gaps = 9/153 (5%)

Query: 277 QKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
                  +Y + +      R+T +        ++SP+S +          +  +   + G
Sbjct: 242 SYYGETTLYLLGITGAFDSRITLDKEGPIHDVAWSPNSREFAVVYGYMPSKTTF-FDARG 300

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQA 394
           ++   I    E S     +SP G L+    F   + A+ ++ +     ++     +N   
Sbjct: 301 NE---IHTLAECSRNTIRFSPHGRLVLLGGFGNIQGAVDILDRQSKFAKVATLHAANASH 357

Query: 395 PTWSPSGRSLIFSRKKDG---DTGSKLYSIDLN 424
             WSP  + ++ +        D G +++ +  N
Sbjct: 358 VAWSPDSQYVLTATTAPRLRVDNGFRIWHVKGN 390



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 5/134 (3%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           +  S   + +L ++   GA    +T  ++  + +  +SPN ++ A          +    
Sbjct: 239 TGRSYYGETTLYLLGITGAFDSRITLDKEGPIHDVAWSPNSREFAVVYGYMPS--KTTFF 296

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D R +         R+ I   RFS +G+  L+    +    +  +D QS   +  T    
Sbjct: 297 DARGNEIHTLAECSRNTI---RFSPHGRLVLLGGFGNIQGAVDILDRQSKFAKVATLHAA 353

Query: 303 INISASYSPDSSQI 316
                ++SPDS  +
Sbjct: 354 NASHVAWSPDSQYV 367


>gi|46121933|ref|XP_385520.1| hypothetical protein FG05344.1 [Gibberella zeae PH-1]
 gi|121814503|sp|Q4IBR4|HIR1_GIBZE RecName: Full=Protein HIR1
          Length = 1046

 Score = 45.8 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 44/237 (18%), Positives = 79/237 (33%), Gaps = 43/237 (18%)

Query: 220 SPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRA 272
           SP+ +++A A             +Y  +T     P+++    +    I + RFS NG+  
Sbjct: 26  SPDGKRLATAGGDGHVRVWSTESIYNANTPDYNKPRQLCHMSHHLGTIHSVRFSPNGRYL 85

Query: 273 LISVQKDEAMDIYSVDLQ------SNAT----------ERLTNTLFINISASYSPDSS-- 314
             S   D+ + +Y +D                      +RL          ++S DSS  
Sbjct: 86  A-SGADDKIICVYHLDKNPPAATFGTNEPPPIENWKTYKRLIGHDNDVQDLAWSYDSSIL 144

Query: 315 -------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
                  ++V  S     E+L  + ++ S  K I+ D  A+ F    S    +  F   S
Sbjct: 145 VSVGLDSKVVVWSGHT-FEKLKTLPAHQSHVKGITFD-PANKFFATASDDRTIKIFRFTS 202

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFSRKKDGDTGS 416
               A      +       +      +P        +WSP G  +  +   +G   S
Sbjct: 203 PAPNATQHDMVNNFVLETTISSPFKSSPLTTYFRRCSWSPDGNHIAAANAVNGPVSS 259


>gi|317402563|gb|EFV83127.1| hypothetical protein HMPREF0005_02287 [Achromobacter xylosoxidans
           C54]
          Length = 423

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 38/257 (14%), Positives = 82/257 (31%), Gaps = 61/257 (23%)

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRIL 178
            G  RL V +              + F   AS  +  H +S         E    ++RIL
Sbjct: 182 SGDHRLLVSY-----------AELRNFHPRASMERAIHWVS-------HIEVNPSSTRIL 223

Query: 179 FVSESVVSGIIKN----SLCVMDRDGANIRYL-----------------------TPSRD 211
           F+         +      L  M+ DG+++R L                           +
Sbjct: 224 FLHRWTERVEDETCFLHRLITMNPDGSDMRLLECSDHPLPQLAADFDPNAVGTFDYEKSE 283

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPRFSS-NG 269
             +  P +  ++  + +  +     +  +L +       + +G+   +      FS  + 
Sbjct: 284 YQISHPLWRDDRSIIVWGPHA--GSIHYHLYEDADGGQVQVVGDGILTENGHMTFSPVDT 341

Query: 270 KRALISVQKDEAMD---IYSVDLQSNATERLTNTLFI---------NISASYSPDSSQIV 317
           +  L     D       ++  D+++     L +             ++   +S D +Q+ 
Sbjct: 342 RWLLSDTYPDPVTHERILFLYDMRTGQRHDLGSFYADPALSKENRCDLHPRWSRDGTQVC 401

Query: 318 FESDREGKEQLYVMQSN 334
            +S  EG+ Q+YV+   
Sbjct: 402 IDSVHEGERQMYVLDVG 418


>gi|313679633|ref|YP_004057372.1| peptidase s9 prolyl oligopeptidase active site domain protein
           [Oceanithermus profundus DSM 14977]
 gi|313152348|gb|ADR36199.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Oceanithermus profundus DSM 14977]
          Length = 630

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 45/144 (31%), Gaps = 18/144 (12%)

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-----DE 280
           VA   +++       L   R     + IG     +  P FS +G                
Sbjct: 192 VASGDFEERRRWIQRLYRWRPGGEAREIGGGFGPVSDPVFSEDGGSIYFVGYDWAAGIGA 251

Query: 281 AMDIYSVDLQSNATERLT------------NTLFINISASYSPDS-SQIVFESDREGKEQ 327
           +  ++ +       +RLT            +  + +   +  PD      F     G+ +
Sbjct: 252 SPGVWRLPRSGGEADRLTPEALYVGLSLVSDVHYGDYGRALEPDGEGGFWFSVTEAGEGR 311

Query: 328 LYVMQSNGSDQKRISQDKEASYFD 351
           LY ++++G  +  +      + F 
Sbjct: 312 LYRLRADGGVEGPLPLPGSLAAFA 335



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 67/209 (32%), Gaps = 33/209 (15%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-DEAMDIYSVDLQ 290
           + E     YL    + R  KR    +     PR+  +G R +  ++K D+   +Y +DL 
Sbjct: 37  EQEGDPPRYLSRLWLQRDGKRRALTQEDTARPRW--DGGRYVYFLRKYDQVKQLYRLDLA 94

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKEQLY---------VMQSNGS 336
               ERLT+           P+ +  V     E     G  ++Y         V      
Sbjct: 95  GGEAERLTSFKAGVEGYVLGPEGALAVLTRGDEAPAKPGTPRVYDRLPFKFDGVGLLPER 154

Query: 337 DQKRISQDKEASYFDP----------VWSPQGDLIA------FTKFSGEKFAIGVMKKDG 380
            ++   +  +  + +P           W  +GD +       F +       +   +  G
Sbjct: 155 SRQVRVRRSDGGWSEPSELPTDVDAAAWDERGDELVLVASGDFEERRRWIQRLYRWRPGG 214

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
               +      +  P +S  G S+ F   
Sbjct: 215 EAREIGGGFGPVSDPVFSEDGGSIYFVGY 243


>gi|311249635|ref|XP_003123712.1| PREDICTED: THO complex subunit 3-like [Sus scrofa]
          Length = 351

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 83/242 (34%), Gaps = 15/242 (6%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           SV SG  +  L + +   G +     P+    +    +S + +++A  ++D      V+L
Sbjct: 26  SVTSGPTRYVLGMQELFRGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFD--KTASVFL 83

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++                +    +  +     ++   D+ + I+  D+++       NT 
Sbjct: 84  LEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIW--DVRTTKCIATVNTK 141

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
             NI+  +SPD   I       G +   V   +    +  ++++     +   W+   ++
Sbjct: 142 GENINICWSPDGQTIAV-----GNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNM 196

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             F         I    +    + +    SN     + P G+   +      D    L+ 
Sbjct: 197 F-FLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGK---YFATGSADALVSLWD 252

Query: 421 ID 422
           +D
Sbjct: 253 VD 254



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 29/230 (12%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R    S DQ+ + P  +P+     + T   +  +R++  D R  +    + N +   +
Sbjct: 94  NYRGHGDSVDQLCWHPS-NPD----LFVTASGDKTIRIW--DVRTTKCIATV-NTKGENI 145

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +G+   +  + D    I +   +S A E+     F     S++ D++       
Sbjct: 146 NICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ---FKFEVNEISWNNDNNMFFLT-- 200

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G   + ++        +      ++     + P G   A          + +   D  
Sbjct: 201 -NGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADA---LVSLWDVD-- 254

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDG------DTGSKLYSI 421
           +   +   S L  P    ++S  G+ L  + +         +TG KL+ +
Sbjct: 255 ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEV 304


>gi|283781247|ref|YP_003372002.1| WD-40 repeat-containing protein [Pirellula staleyi DSM 6068]
 gi|283439700|gb|ADB18142.1| WD-40 repeat protein [Pirellula staleyi DSM 6068]
          Length = 397

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 66/309 (21%), Positives = 115/309 (37%), Gaps = 38/309 (12%)

Query: 54  KFVSIDELGGKVSEVVSKDLQ-RSDVFNLISQDSFKQKITNPDSIPRF-------QDW-N 104
           KF SID      ++VV  DLQ R + F    ++          +   F       QDW +
Sbjct: 101 KFWSIDAASTGTAQVVL-DLQTRREQFKRTKKEEVLSAPGVEVATCSFSRSLDLHQDWIH 159

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW---RKIAHTISDD 161
           +LGA     G   K        E  +WD++  + +   K+   P +W    +++H  S  
Sbjct: 160 TLGAS----GDFSKLISGDASSEVFVWDIERGEPLA--KWKGHPWNWIVGARLSHDGSLA 213

Query: 162 IYQSITGEKGDFNSRIL-FVSESVVSGIIKNSLCVMDR------DGA--NIRYLTPSRDQ 212
           +      ++ DF+     F   S   G  K  +  +        D +  N +        
Sbjct: 214 VVSEFRYKRDDFDIPTAGFRVFSASDGAEKLDILKVQFPKLQAEDTSYGNGQIWKKFVAD 273

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            L    FSP+ + +A     + D  + +L++T   +  + +   +  +    FS +GK  
Sbjct: 274 GLVALAFSPDGKLIAAGQGGETDTGKAHLVETESGKLVRDVSGHQYGMTDLCFSRDGKFL 333

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFIN----ISA-SYSPDSSQIVFESDREGKEQ 327
             +  +D  + +  V+        L +         ISA S SPD S +   +D  G   
Sbjct: 334 -FTAGRDTCIRVVQVE-DGKELAVLGSPRGGQFKDWISAISLSPDESHLA-AADIAG--H 388

Query: 328 LYVMQSNGS 336
           + V Q  GS
Sbjct: 389 IAVWQLQGS 397


>gi|302141936|emb|CBI19139.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 7/140 (5%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGK 325
            NG   +++   D  + I+  D ++ A   R T    +N + S SPD   +    D    
Sbjct: 389 PNGSLRVMAANNDAEVRIF--DAENFACLNRFTYPWSVN-NTSVSPDGKLLAVLGDSA-- 443

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            +  +  +         +      F   W P G  +A            +     SQ  L
Sbjct: 444 -ECLLADAQTGKVVATLKGHLDYSFASAWHPDGRTLATGNQDTTCRLWDIRNLSESQAVL 502

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
                 ++A  +S  GR + 
Sbjct: 503 KGRMGAIRAVRFSSDGRFMA 522



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 50/167 (29%), Gaps = 21/167 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + +A       D     L D +  +    +        A  +  +G+    +  
Sbjct: 428 SVSPDGKLLAV----LGDSAECLLADAQTGKVVATLKGHLDYSFASAWHPDGRTLA-TGN 482

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D    ++ +   S +   L   +    +  +S D   +      E  + ++V  +    
Sbjct: 483 QDTTCRLWDIRNLSESQAVLKGRMGAIRAVRFSSDGRFMAMA---EPADFVHVFDTESGY 539

Query: 338 QKRISQDKEASYFDPVWSPQ-------------GDLIAFTKFSGEKF 371
            K    D         +SP              G L+ F +    ++
Sbjct: 540 VKGQEIDLFGEIAGISFSPDTEALFVGIADRTYGSLLEFNRRRCNQY 586



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 9/123 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
              + D     +           F   + P+ + +A    D        L D R     +
Sbjct: 444 ECLLADAQTGKVVATLKGHLDYSFASAWHPDGRTLATGNQDT----TCRLWDIRNLSESQ 499

Query: 252 RIGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASY 309
            +   R   I A RFSS+G+   ++   + A  ++  D +S   + +  +        S+
Sbjct: 500 AVLKGRMGAIRAVRFSSDGRFMAMA---EPADFVHVFDTESGYVKGQEIDLFGEIAGISF 556

Query: 310 SPD 312
           SPD
Sbjct: 557 SPD 559


>gi|284989105|ref|YP_003407659.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Geodermatophilus obscurus DSM 43160]
 gi|284062350|gb|ADB73288.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Geodermatophilus obscurus DSM 43160]
          Length = 595

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/187 (13%), Positives = 59/187 (31%), Gaps = 12/187 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V     S    + L +    G   R +    D    +   + ++  +  +  +  D    
Sbjct: 127 VVAVGRSTDDGSELWLAPA-GGTPRVVYRHEDPASVD-ALTHDEDLLVISHSEHGDPRYP 184

Query: 240 YLMDTRIDRAPKRIGNFRS-------MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            L   R D        +         +  AP      +R L+  ++    ++   D+ ++
Sbjct: 185 ALRLLRTDDDSVVAEKWDGEGRGLHALEFAPL--PGDRRLLVGHERRGREELLVWDVGTD 242

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               +   L  +++A + PD S ++   D   + +LY         +R+   +       
Sbjct: 243 TETEIVLDLPGDVTAGWYPDGSALLVGHDHAARSELYRYDLGSGALERLDTPRGVVRGAT 302

Query: 353 VWSPQGD 359
              P G 
Sbjct: 303 AR-PDGT 308



 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 32/266 (12%), Positives = 70/266 (26%), Gaps = 13/266 (4%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           S VSG+++        D          R         SP+ + + +    D D   V++ 
Sbjct: 42  SDVSGVVEQYAWDRTTD---AHRQATDRANGTLIGTLSPDGETIWWFADTDGDEFGVWMT 98

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                   +                      +    D+  +++           +     
Sbjct: 99  QPFAGGEDRVAVPEVGPAYPAGLEVGTSVVAVGRSTDDGSELWLAPA-GGTPRVVYRHED 157

Query: 303 INISASYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDKEAS---YFDPVWSP 356
                + + D   +V      G  +   L +++++         D E       +    P
Sbjct: 158 PASVDALTHDEDLLVISHSEHGDPRYPALRLLRTDDDSVVAEKWDGEGRGLHALEFAPLP 217

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
               +        +  + V       E  ++++        W P G +L+          
Sbjct: 218 GDRRLLVGHERRGREELLVWDVGTDTETEIVLDLPGDVTAGWYPDGSALLVGHDHAAR-- 275

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQ 441
           S+LY  DL       ++TP       
Sbjct: 276 SELYRYDLGSGALERLDTPRGVVRGA 301



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 38/110 (34%), Gaps = 1/110 (0%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             +     ++      + + D   D   + + +    + A  +  +G   L+        
Sbjct: 218 GDRRLLVGHERRGREELLVWDVGTDTETEIVLDLPGDVTA-GWYPDGSALLVGHDHAARS 276

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           ++Y  DL S A ERL     +   A+  PD +  +  S+ E    +    
Sbjct: 277 ELYRYDLGSGALERLDTPRGVVRGATARPDGTVELAWSNSERPPVIRRAD 326



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 67/172 (38%), Gaps = 7/172 (4%)

Query: 250 PKRIGNFRSMILAPRFS-SN-----GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           P+    +++   APR S  +      +R+L +      ++ Y+ D  ++A  + T+    
Sbjct: 10  PEVTARWQARFRAPRVSLPDWALEAPQRSLYASDVSGVVEQYAWDRTTDAHRQATDRANG 69

Query: 304 NISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +  + SPD   I + +D +G E  +++ Q     + R++  +    +         ++A
Sbjct: 70  TLIGTLSPDGETIWWFADTDGDEFGVWMTQPFAGGEDRVAVPEVGPAYPAGLEVGTSVVA 129

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             + + +   + +    G+   +   +        +     L+ S  + GD 
Sbjct: 130 VGRSTDDGSELWLAPAGGTPRVVYRHEDPASVDALTHDEDLLVISHSEHGDP 181


>gi|225459348|ref|XP_002285804.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 450

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 46/140 (32%), Gaps = 7/140 (5%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGK 325
            NG   +++   D  + I+  D ++ A   R T    +N + S SPD   +    D    
Sbjct: 248 PNGSLRVMAANNDAEVRIF--DAENFACLNRFTYPWSVN-NTSVSPDGKLLAVLGDSA-- 302

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            +  +  +         +      F   W P G  +A            +     SQ  L
Sbjct: 303 -ECLLADAQTGKVVATLKGHLDYSFASAWHPDGRTLATGNQDTTCRLWDIRNLSESQAVL 361

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
                 ++A  +S  GR + 
Sbjct: 362 KGRMGAIRAVRFSSDGRFMA 381



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/167 (13%), Positives = 50/167 (29%), Gaps = 21/167 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ + +A       D     L D +  +    +        A  +  +G+    +  
Sbjct: 287 SVSPDGKLLAV----LGDSAECLLADAQTGKVVATLKGHLDYSFASAWHPDGRTLA-TGN 341

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D    ++ +   S +   L   +    +  +S D   +      E  + ++V  +    
Sbjct: 342 QDTTCRLWDIRNLSESQAVLKGRMGAIRAVRFSSDGRFMAMA---EPADFVHVFDTESGY 398

Query: 338 QKRISQDKEASYFDPVWSPQ-------------GDLIAFTKFSGEKF 371
            K    D         +SP              G L+ F +    ++
Sbjct: 399 VKGQEIDLFGEIAGISFSPDTEALFVGIADRTYGSLLEFNRRRCNQY 445



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 9/123 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
              + D     +           F   + P+ + +A    D        L D R     +
Sbjct: 303 ECLLADAQTGKVVATLKGHLDYSFASAWHPDGRTLATGNQDT----TCRLWDIRNLSESQ 358

Query: 252 RIGNFR-SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASY 309
            +   R   I A RFSS+G+   ++   + A  ++  D +S   + +  +        S+
Sbjct: 359 AVLKGRMGAIRAVRFSSDGRFMAMA---EPADFVHVFDTESGYVKGQEIDLFGEIAGISF 415

Query: 310 SPD 312
           SPD
Sbjct: 416 SPD 418


>gi|149637799|ref|XP_001505891.1| PREDICTED: similar to apoptotic protease activating factor-1 long
            isoform 1 [Ornithorhynchus anatinus]
          Length = 1250

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 84/238 (35%), Gaps = 33/238 (13%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTR----IDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            RF+ + + V  ++ D   +++V++  T     +    + + +FR +             L
Sbjct: 1012 RFTSDGKTVISSSDD--PVIQVWIWQTEEYVFLQAHQESVKDFRLLQ---------NSRL 1060

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             S   D  + ++++ L     +         +S + SPD+++    S     +   +   
Sbjct: 1061 FSWSFDGTIKVWNI-LTGKVEKDFFCHQGAVLSCNISPDATKF---SSTSADKTAKIWSF 1116

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--------GSQERL 385
              S         E       +S    L+A T     +  I  + K         G     
Sbjct: 1117 ENSSLLHELSGHEGCVRCSAFSDDSSLLA-TGDDNGEIRIWDVSKGEILHLCAPGPVGEA 1175

Query: 386  LVEDSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYAS 438
                  +    +SP  + L+    F +  + DTG  L +   NG N +T+  +P++ S
Sbjct: 1176 STHGGWVTDLCFSPDSKILVSAGGFLKWWNMDTGESLQTFYTNGTNLKTIFVSPSFKS 1233



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 53/172 (30%), Gaps = 19/172 (11%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       ++   FS + Q++A    D      V +           I      +L  
Sbjct: 608 RLVVRPHTDAVYHACFSEDGQRIASCGADK----TVQVFKAETGEKLLEIKAHEDEVLCC 663

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQI--V 317
            FS + K    +   D+ + ++  + Q+    +L +T   +        +S  SS     
Sbjct: 664 AFSPDDKFVA-TCSTDKKVKVW--NSQTG---KLVHTYEEHTEQVNFCQFSNTSSHPLLA 717

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             S+    + L +   N    +        S     +SP    +A     G 
Sbjct: 718 TCSN---DQFLKLWDLNQKGCRNTMFGHSDSVNHCKFSPDDKYLASCSADGT 766


>gi|149637805|ref|XP_001505996.1| PREDICTED: similar to apoptotic protease activating factor-1 long
            isoform 4 [Ornithorhynchus anatinus]
          Length = 1196

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 84/238 (35%), Gaps = 33/238 (13%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTR----IDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            RF+ + + V  ++ D   +++V++  T     +    + + +FR +             L
Sbjct: 958  RFTSDGKTVISSSDD--PVIQVWIWQTEEYVFLQAHQESVKDFRLLQ---------NSRL 1006

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             S   D  + ++++ L     +         +S + SPD+++    S     +   +   
Sbjct: 1007 FSWSFDGTIKVWNI-LTGKVEKDFFCHQGAVLSCNISPDATKF---SSTSADKTAKIWSF 1062

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--------GSQERL 385
              S         E       +S    L+A T     +  I  + K         G     
Sbjct: 1063 ENSSLLHELSGHEGCVRCSAFSDDSSLLA-TGDDNGEIRIWDVSKGEILHLCAPGPVGEA 1121

Query: 386  LVEDSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYAS 438
                  +    +SP  + L+    F +  + DTG  L +   NG N +T+  +P++ S
Sbjct: 1122 STHGGWVTDLCFSPDSKILVSAGGFLKWWNMDTGESLQTFYTNGTNLKTIFVSPSFKS 1179



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 93/273 (34%), Gaps = 33/273 (12%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R +    +D +Y +   E G    RI         G  K         G  +  +    D
Sbjct: 597 RLVVRPHTDAVYHACFSEDG---QRIASC------GADKTVQVFKAETGEKLLEIKAHED 647

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           ++L    FSP+ + VA  + D +    V + +++  +           +   +FS+    
Sbjct: 648 EVLCC-AFSPDDKFVATCSTDKK----VKVWNSQTGKLVHTYEEHTEQVNFCQFSNTSSH 702

Query: 272 -ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY- 329
             L +   D+ + ++ ++ +        ++  +N    +SPD   +   S  +G  +L+ 
Sbjct: 703 PLLATCSNDQFLKLWDLNQKGCRNTMFGHSDSVN-HCKFSPDDKYLASCS-ADGTLKLWE 760

Query: 330 VMQSNGSDQKRISQDKEASYF---------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           V  +N      +S+  + S              W+  G  I  T  +     I +   D 
Sbjct: 761 VASANEWKSIDVSKFFQTSEHEEDVEVLVKCCSWTTDGATIMVTAKN----MIFLWNTDS 816

Query: 381 --SQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                      S +   T+SP G S + S    
Sbjct: 817 CLKVADCRGHLSWVHCVTFSPDGSSFLTSSDDQ 849


>gi|149637803|ref|XP_001505925.1| PREDICTED: similar to apoptotic protease activating factor-1 long
            isoform 2 [Ornithorhynchus anatinus]
          Length = 1207

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 84/238 (35%), Gaps = 33/238 (13%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTR----IDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            RF+ + + V  ++ D   +++V++  T     +    + + +FR +             L
Sbjct: 969  RFTSDGKTVISSSDD--PVIQVWIWQTEEYVFLQAHQESVKDFRLLQ---------NSRL 1017

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             S   D  + ++++ L     +         +S + SPD+++    S     +   +   
Sbjct: 1018 FSWSFDGTIKVWNI-LTGKVEKDFFCHQGAVLSCNISPDATKF---SSTSADKTAKIWSF 1073

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--------GSQERL 385
              S         E       +S    L+A T     +  I  + K         G     
Sbjct: 1074 ENSSLLHELSGHEGCVRCSAFSDDSSLLA-TGDDNGEIRIWDVSKGEILHLCAPGPVGEA 1132

Query: 386  LVEDSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYAS 438
                  +    +SP  + L+    F +  + DTG  L +   NG N +T+  +P++ S
Sbjct: 1133 STHGGWVTDLCFSPDSKILVSAGGFLKWWNMDTGESLQTFYTNGTNLKTIFVSPSFKS 1190



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 47/273 (17%), Positives = 93/273 (34%), Gaps = 33/273 (12%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD 211
           R +    +D +Y +   E G    RI         G  K         G  +  +    D
Sbjct: 608 RLVVRPHTDAVYHACFSEDG---QRIASC------GADKTVQVFKAETGEKLLEIKAHED 658

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
           ++L    FSP+ + VA  + D +    V + +++  +           +   +FS+    
Sbjct: 659 EVLCC-AFSPDDKFVATCSTDKK----VKVWNSQTGKLVHTYEEHTEQVNFCQFSNTSSH 713

Query: 272 -ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY- 329
             L +   D+ + ++ ++ +        ++  +N    +SPD   +   S  +G  +L+ 
Sbjct: 714 PLLATCSNDQFLKLWDLNQKGCRNTMFGHSDSVN-HCKFSPDDKYLASCS-ADGTLKLWE 771

Query: 330 VMQSNGSDQKRISQDKEASYF---------DPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           V  +N      +S+  + S              W+  G  I  T  +     I +   D 
Sbjct: 772 VASANEWKSIDVSKFFQTSEHEEDVEVLVKCCSWTTDGATIMVTAKN----MIFLWNTDS 827

Query: 381 --SQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
                      S +   T+SP G S + S    
Sbjct: 828 CLKVADCRGHLSWVHCVTFSPDGSSFLTSSDDQ 860


>gi|149637801|ref|XP_001505965.1| PREDICTED: similar to apoptotic protease activating factor-1 long
            isoform 3 [Ornithorhynchus anatinus]
          Length = 1239

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 40/238 (16%), Positives = 84/238 (35%), Gaps = 33/238 (13%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTR----IDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            RF+ + + V  ++ D   +++V++  T     +    + + +FR +             L
Sbjct: 1001 RFTSDGKTVISSSDD--PVIQVWIWQTEEYVFLQAHQESVKDFRLLQ---------NSRL 1049

Query: 274  ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             S   D  + ++++ L     +         +S + SPD+++    S     +   +   
Sbjct: 1050 FSWSFDGTIKVWNI-LTGKVEKDFFCHQGAVLSCNISPDATKF---SSTSADKTAKIWSF 1105

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--------GSQERL 385
              S         E       +S    L+A T     +  I  + K         G     
Sbjct: 1106 ENSSLLHELSGHEGCVRCSAFSDDSSLLA-TGDDNGEIRIWDVSKGEILHLCAPGPVGEA 1164

Query: 386  LVEDSNLQAPTWSPSGRSLI----FSRKKDGDTGSKLYSIDLNGRN-ETLINTPAYAS 438
                  +    +SP  + L+    F +  + DTG  L +   NG N +T+  +P++ S
Sbjct: 1165 STHGGWVTDLCFSPDSKILVSAGGFLKWWNMDTGESLQTFYTNGTNLKTIFVSPSFKS 1222



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 53/172 (30%), Gaps = 19/172 (11%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       ++   FS + Q++A    D      V +           I      +L  
Sbjct: 597 RLVVRPHTDAVYHACFSEDGQRIASCGADK----TVQVFKAETGEKLLEIKAHEDEVLCC 652

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS----ASYSPDSSQI--V 317
            FS + K    +   D+ + ++  + Q+    +L +T   +        +S  SS     
Sbjct: 653 AFSPDDKFVA-TCSTDKKVKVW--NSQTG---KLVHTYEEHTEQVNFCQFSNTSSHPLLA 706

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             S+    + L +   N    +        S     +SP    +A     G 
Sbjct: 707 TCSN---DQFLKLWDLNQKGCRNTMFGHSDSVNHCKFSPDDKYLASCSADGT 755


>gi|146416843|ref|XP_001484391.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 398

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 53/133 (39%), Gaps = 20/133 (15%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--- 263
                +++    FSP+ + V  +++D+        +          IG FR  + AP   
Sbjct: 281 MTGHQKLVNHVSFSPDGRYVVSSSFDNS-------IKLWDGIKGTFIGTFRGHV-APVYQ 332

Query: 264 -RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
             +S +  R L+S  KD  + ++  D+++      L        +  +S D  ++     
Sbjct: 333 TAWSPD-SRLLVSCSKDTTLKVW--DVRTRKLSVDLPGHADEVYAVDWSMDGKRVA---- 385

Query: 322 REGKEQLYVMQSN 334
             GK+++  + S+
Sbjct: 386 SGGKDKMVRIWSS 398



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 6/130 (4%)

Query: 234 EDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            D   +YL +      P  R+   + ++    FS +G+  ++S   D ++ ++   ++  
Sbjct: 261 SDDFTMYLWEPLKSSKPVCRMTGHQKLVNHVSFSPDGRY-VVSSSFDNSIKLWD-GIKGT 318

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                   +      ++SPDS  +V  S       L V                   +  
Sbjct: 319 FIGTFRGHVAPVYQTAWSPDSRLLVSCSK---DTTLKVWDVRTRKLSVDLPGHADEVYAV 375

Query: 353 VWSPQGDLIA 362
            WS  G  +A
Sbjct: 376 DWSMDGKRVA 385



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 47/153 (30%), Gaps = 11/153 (7%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +  L++   D  M ++     S    R+T    +    S+SPD   +V  S       + 
Sbjct: 254 RERLVTASDDFTMYLWEPLKSSKPVCRMTGHQKLVNHVSFSPDGRYVVSSSF---DNSIK 310

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +            +   A  +   WSP   L+           + V      +  + +  
Sbjct: 311 LWDGIKGTFIGTFRGHVAPVYQTAWSPDSRLLVSCSKDTT---LKVWDVRTRKLSVDLPG 367

Query: 390 SNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
              +     WS  G+ +        D   +++S
Sbjct: 368 HADEVYAVDWSMDGKRVA---SGGKDKMVRIWS 397



 Score = 36.9 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 5/105 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             VVS    NS+ + D                +++  +SP+ + +   + D      + +
Sbjct: 298 RYVVSSSFDNSIKLWDGIKGTFIGTFRGHVAPVYQTAWSPDSRLLVSCSKDT----TLKV 353

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            D R  +    +      + A  +S +GKR   S  KD+ + I+S
Sbjct: 354 WDVRTRKLSVDLPGHADEVYAVDWSMDGKRVA-SGGKDKMVRIWS 397


>gi|116624005|ref|YP_826161.1| peptidase S9 prolyl oligopeptidase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116227167|gb|ABJ85876.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Candidatus Solibacter usitatus Ellin6076]
          Length = 842

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/164 (14%), Positives = 45/164 (27%), Gaps = 28/164 (17%)

Query: 261 LAPRFSSNGKRALISVQKDEA--MDIYSVDLQSNATERLTNTLFINISASYSP------- 311
             P +  +G+       +       +  V+  +     L        S ++         
Sbjct: 369 TMPVWWKDGRGFTFEYNQRGHQIYRVIEVEANTGKARALITEE----SPTFIDYQLLPTG 424

Query: 312 --------DSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIA 362
                   D  +I++ S+R+G E LY+        K +I++                 I 
Sbjct: 425 KRYRYNLDDGKEIIWGSERDGWEHLYLYDGVTGKVKSQITKGNWVLRGVDFVDEDKKQIW 484

Query: 363 FT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           F       +          +  DG+    L E       T+S  
Sbjct: 485 FQASGVNPEQDPYFIHYYRINFDGTGLTKLTEADGNHTVTYSKD 528



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 57/170 (33%), Gaps = 28/170 (16%)

Query: 214 LFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS----- 267
           L  P +  + +   +        I RV  ++    +A   I       +  +        
Sbjct: 368 LTMPVWWKDGRGFTFEYNQRGHQIYRVIEVEANTGKARALITEESPTFIDYQLLPTGKRY 427

Query: 268 -----NGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASY-SPDSSQIVFES 320
                +GK  +   ++D    +Y  D  +   + ++T   ++     +   D  QI F++
Sbjct: 428 RYNLDDGKEIIWGSERDGWEHLYLYDGVTGKVKSQITKGNWVLRGVDFVDEDKKQIWFQA 487

Query: 321 DREGKEQ------LYVMQSNGSDQKRI---------SQDKEASYFDPVWS 355
                EQ       Y +  +G+   ++         +  K+ +Y+   WS
Sbjct: 488 SGVNPEQDPYFIHYYRINFDGTGLTKLTEADGNHTVTYSKDRAYYVDSWS 537


>gi|115398498|ref|XP_001214838.1| transcriptional repressor rco-1 [Aspergillus terreus NIH2624]
 gi|114191721|gb|EAU33421.1| transcriptional repressor rco-1 [Aspergillus terreus NIH2624]
          Length = 586

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 68/209 (32%), Gaps = 16/209 (7%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMIL 261
           + +   R   +    ++P+    A    +  D   V+  + +     + + +    S++ 
Sbjct: 227 QPIVRDRPGNMLA-NWNPD-DLPASQKREGADWYAVFNPEVQRVLDVELVHHLVHDSVVC 284

Query: 262 APRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             RFS +GK       +     D         LQ    ++  N      S  +SPD   +
Sbjct: 285 CVRFSRDGKYLATGCNRSAQIFDVTTGQNVATLQDENVDK--NGDLYIRSVCFSPDGKYL 342

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              ++    +Q+ V        K I    E   +   ++  G  IA +    +   +  +
Sbjct: 343 ATGAE---DKQIRVWDIAARSIKHIFTGHEQDIYSLDFAGNGRYIA-SGSGDKTVRLWDI 398

Query: 377 KKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             DG     L  +  +     SP G  + 
Sbjct: 399 -LDGKLVYTLSIEDGVTTVAMSPDGHYVA 426


>gi|332019035|gb|EGI59569.1| TAF5-like RNA polymerase II p300/CBP-associated factor-associated
           factor 65 kDa subunit 5L [Acromyrmex echinatior]
          Length = 613

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/100 (14%), Positives = 38/100 (38%), Gaps = 5/100 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ +  +D  N+  +       ++   FSP+ + +A       D   +Y+ D  
Sbjct: 468 TGSADKTVRLWSKDDGNLLRVYVGAQSTIYTLAFSPDGKYLA----AAGDDKSIYIWDLA 523

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
            +     +   +  I+   +S + +    S   D  + ++
Sbjct: 524 TNGLLTELKGHKDTIMNVDWSLDNQYIA-SASLDGIVRLW 562



 Score = 43.9 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 18/153 (11%), Positives = 41/153 (26%), Gaps = 5/153 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
            P +  +                  L         +        +   +F  N +    +
Sbjct: 410 YPIWCMDTSVFNLYIGTGSHDRTAKLWSLDRTFPLRIFAGHFLDVNCIKFHPNARYLA-T 468

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
              D+ + ++S D   N             + ++SPD   +    D    + +Y+     
Sbjct: 469 GSADKTVRLWSKD-DGNLLRVYVGAQSTIYTLAFSPDGKYLAAAGD---DKSIYIWDLAT 524

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +      +  + +  +  WS     IA     G
Sbjct: 525 NGLLTELKGHKDTIMNVDWSLDNQYIASASLDG 557



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 53/139 (38%), Gaps = 15/139 (10%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQS 333
           +   D    ++S+D       R+    F++++   + P++  +   S     + + +   
Sbjct: 426 TGSHDRTAKLWSLDRTF--PLRIFAGHFLDVNCIKFHPNARYLATGS---ADKTVRLWSK 480

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE----D 389
           +  +  R+    +++ +   +SP G  +A    +G+  +I +     +   LL E     
Sbjct: 481 DDGNLLRVYVGAQSTIYTLAFSPDGKYLA---AAGDDKSIYIWDLATNG--LLTELKGHK 535

Query: 390 SNLQAPTWSPSGRSLIFSR 408
             +    WS   + +  + 
Sbjct: 536 DTIMNVDWSLDNQYIASAS 554


>gi|302544199|ref|ZP_07296541.1| putative peptidase [Streptomyces hygroscopicus ATCC 53653]
 gi|302461817|gb|EFL24910.1| putative peptidase [Streptomyces himastatinicus ATCC 53653]
          Length = 626

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 41/284 (14%), Positives = 76/284 (26%), Gaps = 34/284 (11%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +      L   DR     R +T   +    +   +P+ + + + +  D D   V+L  
Sbjct: 29  VSNATGTYELYAWDRATGAQRQVTDRPNG-TTDGVLTPDGRWIWWFSDTDGDEFGVWLRQ 87

Query: 244 T--------------------RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
                                     P   G   S         +G  A++    DE   
Sbjct: 88  PFDGADGADGAGADGGESGEASGADEPAAPGLEPSYPAGLALGRDGT-AVVGRSTDEEGS 146

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKR 340
              V    +    +            S D + I  E    G      + V++ +G+    
Sbjct: 147 TIHVVAPGSEPREIYRHRESAGVGDLSHDGTLIAVEHTEHGDAMHSVIRVVRLDGTAVAE 206

Query: 341 ISQDKEA------SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQ 393
           +   K        S            +        ++   V       E  L  +     
Sbjct: 207 LDDTKGGTEELGLSVMGFAPVAGDTRLLVGHQRRGRWEPMVWDPLTGVETALAIDLPGDV 266

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              W P G +L+ +         +L+  +L     T + TPA +
Sbjct: 267 GADWFPDGSALLIAHDHQARG--ELWRYELASGELTRVETPAGS 308



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 58/189 (30%), Gaps = 27/189 (14%)

Query: 263 PRFS---SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           P ++    +  R+L         ++Y+ D  + A  ++T+          +PD   I + 
Sbjct: 16  PEWAEDAPD--RSLFVSNATGTYELYAWDRATGAQRQVTDRPNGTTDGVLTPDGRWIWWF 73

Query: 320 SDREGKEQLYVMQ---------------------SNGSDQKRISQDKEASYFDPVWSPQG 358
           SD +G E    ++                     ++G+D+      + +          G
Sbjct: 74  SDTDGDEFGVWLRQPFDGADGADGAGADGGESGEASGADEPAAPGLEPSYPAGLALGRDG 133

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSK 417
             +       E   I V+        +     +      S  G  +     + GD   S 
Sbjct: 134 TAVVGRSTDEEGSTIHVVAPGSEPREIYRHRESAGVGDLSHDGTLIAVEHTEHGDAMHSV 193

Query: 418 LYSIDLNGR 426
           +  + L+G 
Sbjct: 194 IRVVRLDGT 202



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 65/200 (32%), Gaps = 15/200 (7%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             G    R         +    +++ V+   G+  R +   R+        S +   +A 
Sbjct: 124 PAGLALGRDGTAVVGRSTDEEGSTIHVVAP-GSEPREIYRHRESAGVG-DLSHDGTLIAV 181

Query: 229 ATYDDEDILRVYLMDTRIDRA-PKRIGNFRS---------MILAPRFSSNGKRALISVQK 278
              +  D +   +   R+D      + + +          M  AP   +   R L+  Q+
Sbjct: 182 EHTEHGDAMHSVIRVVRLDGTAVAELDDTKGGTEELGLSVMGFAPV--AGDTRLLVGHQR 239

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
               +    D  +     L   L  ++ A + PD S ++   D + + +L+  +    + 
Sbjct: 240 RGRWEPMVWDPLTGVETALAIDLPGDVGADWFPDGSALLIAHDHQARGELWRYELASGEL 299

Query: 339 KRISQDKEASYFDPVWSPQG 358
            R+ +    S       P G
Sbjct: 300 TRV-ETPAGSIGGAGARPDG 318


>gi|223038758|ref|ZP_03609051.1| outer membrane lipoprotein [Campylobacter rectus RM3267]
 gi|222880160|gb|EEF15248.1| outer membrane lipoprotein [Campylobacter rectus RM3267]
          Length = 221

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 45/128 (35%), Gaps = 22/128 (17%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYS--------PVSIAFTKFV-------- 56
           MK    LL                +V       +         ++++  +F         
Sbjct: 1   MKNLKFLLAACAAMLITGCATERSRVVETPKVQTLNTAYQGQKIAVSIGRFSNQSSYQNG 60

Query: 57  ----SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLV 112
                 D LG +   ++  +LQ+S  F+++ + +   +    +S    +  N  GA+ ++
Sbjct: 61  VFSDGEDRLGNQAQTILISNLQQSGRFSVLDRSNM--RAIKEESALNKEAQNIKGARYVI 118

Query: 113 TGRVIKEG 120
           TG V + G
Sbjct: 119 TGDVTEFG 126


>gi|108743458|dbj|BAE95561.1| putative acyl-peptide hydrolase [Streptomyces kanamyceticus]
          Length = 672

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 34/229 (14%), Positives = 71/229 (31%), Gaps = 26/229 (11%)

Query: 190 KNSLCVMDRDGAN------IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR----- 238
           +  +  +  DG+       +R L+  R + +  PR SP+    A+  +D   +       
Sbjct: 168 RRVIAAVPLDGSAADDRGAVRELSDDRHRFVTGPRISPDGTHAAWLAWDHPRMPWDGTEL 227

Query: 239 --VYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKDEAMDIYS-VDLQSNAT 294
               L       A +         +A   ++ +G R L +  +    ++Y      S   
Sbjct: 228 MLAELRPDGTFGAARVFAGGPEESVAQVEWAPDG-RLLFASDRTGWWNLYRAAPDDSARA 286

Query: 295 ERL------TNTLFINISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
             L             I  S+ +P  S ++     +G   L ++     +   +      
Sbjct: 287 HALCPRQEEFAGPLWMIGLSWFAPLESGLIAVVHGKGATALGILDPETGEV--VDAAGPW 344

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           + +    +  G  +     S    A  V++ D    R  V  +    P 
Sbjct: 345 TEWAATVAAHGSRVVGIAASPRS-AYEVVELDTGTGRARVIGAAHDDPV 392



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 69/233 (29%), Gaps = 42/233 (18%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD----LQSNATERLTNTLF 302
                R+  +     A      G   +     D+ +  Y  D     +      LT    
Sbjct: 74  WNVRSRVIEYGGRPWAGAEGPEGPLVVFVNFADQRLYAYEPDAPGGGRGAGPRPLTPLSA 133

Query: 303 INISASYSPDSSQIVFESDREG----------------KEQLYVMQSNG------SDQKR 340
           +     ++      V  ++R                  +  +  +  +G         + 
Sbjct: 134 VGGGLRWAD----PVLRAERGEVWCVLEEFTGPAPTDVRRVIAAVPLDGSAADDRGAVRE 189

Query: 341 ISQDKEASYFDPVWSPQGD---LIAFTK----FSGEKFAIGVMKKDGS-QERLLVEDSNL 392
           +S D+      P  SP G     +A+      + G +  +  ++ DG+     +      
Sbjct: 190 LSDDRHRFVTGPRISPDGTHAAWLAWDHPRMPWDGTELMLAELRPDGTFGAARVFAGGPE 249

Query: 393 QAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
           ++     W+P GR L+F+  + G       + D + R   L       + P W
Sbjct: 250 ESVAQVEWAPDGR-LLFASDRTGWWNLYRAAPDDSARAHALCPRQEEFAGPLW 301


>gi|323450908|gb|EGB06787.1| hypothetical protein AURANDRAFT_59181 [Aureococcus anophagefferens]
          Length = 360

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 6/118 (5%)

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +LT+        ++SPD SQ+ F        +L ++ +  +  K    + +       W
Sbjct: 5   TQLTDATVGVSCHAWSPDGSQVAFA---PNSNELKIVDAKSNASKFSLNEHDMVIAAIDW 61

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            P  + I         F     + + +      +L  +       WSP G+    +  
Sbjct: 62  HPTSNFIVTCSHDRNAFVWNYDEAENAWKPSLVILRIERAALDVKWSPDGQKFAVASS 119



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 74/212 (34%), Gaps = 30/212 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+  +VA+A     +   + ++D + + +   +     +I A  +       + +  
Sbjct: 18  AWSPDGSQVAFA----PNSNELKIVDAKSNASKFSLNEHDMVIAAIDWHPTSNFIV-TCS 72

Query: 278 KDEAMDIYSVDLQSNATE------RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            D    +++ D   NA +      R+     +++   +SPD  +    S  +     Y  
Sbjct: 73  HDRNAFVWNYDEAENAWKPSLVILRI-ERAALDV--KWSPDGQKFAVASSAKCVPVCYYE 129

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE----KFAIGVMKKD-------- 379
           Q N     ++ +  +++     W P   ++A      +       + ++  +        
Sbjct: 130 QDNNWWVSKMIKKHKSTVLAVAWHPNSQIVATGSSDFKARVFSAHVAIVDAEQTAGDFAA 189

Query: 380 ----GSQERLLVEDSNLQAPTWSPSGRSLIFS 407
               G           + A  +SPSG  L F+
Sbjct: 190 PVGFGEVYAEFPCAGWVHAVAYSPSGCVLAFA 221



 Score = 43.9 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 27/214 (12%), Positives = 61/214 (28%), Gaps = 20/214 (9%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            N L ++D      ++     D ++    + P    +   ++D    +  Y       + 
Sbjct: 32  SNELKIVDAKSNASKFSLNEHDMVIAAIDWHPTSNFIVTCSHDRNAFVWNYDEAENAWKP 91

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQ----------KDEAMDIYSVDLQSNATERLTN 299
              I       L  ++S +G++  ++            +D    +  + ++ + +  L  
Sbjct: 92  SLVILRIERAALDVKWSPDGQKFAVASSAKCVPVCYYEQDNNWWVSKM-IKKHKSTVLAV 150

Query: 300 TLFINIS--ASYSPDSSQIVFES-----DREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               N    A+ S D    VF +     D E     +       +               
Sbjct: 151 AWHPNSQIVATGSSDFKARVFSAHVAIVDAEQTAGDFAAPVGFGEVYA-EFPCAGWVHAV 209

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
            +SP G ++AF                G+     
Sbjct: 210 AYSPSGCVLAFAGHDASV-HFAQFNTGGAPVVQT 242



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 57/170 (33%), Gaps = 29/170 (17%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASY 309
            ++ +    +    +S +G +   +   +   ++  VD +SNA++  L     +  +  +
Sbjct: 5   TQLTDATVGVSCHAWSPDGSQVAFAPNSN---ELKIVDAKSNASKFSLNEHDMVIAAIDW 61

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTK 365
            P S+ IV  S        +V   + ++       +    E +  D  WSP G   A   
Sbjct: 62  HPTSNFIVTCSH---DRNAFVWNYDEAENAWKPSLVILRIERAALDVKWSPDGQKFAVAS 118

Query: 366 F----------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                          + +  M        +    S + A  W P+ + + 
Sbjct: 119 SAKCVPVCYYEQDNNWWVSKM--------IKKHKSTVLAVAWHPNSQIVA 160


>gi|319763699|ref|YP_004127636.1| hypothetical protein Alide_3023 [Alicycliphilus denitrificans BC]
 gi|330824038|ref|YP_004387341.1| hypothetical protein Alide2_1425 [Alicycliphilus denitrificans
           K601]
 gi|317118260|gb|ADV00749.1| hypothetical protein Alide_3023 [Alicycliphilus denitrificans BC]
 gi|329309410|gb|AEB83825.1| hypothetical protein Alide2_1425 [Alicycliphilus denitrificans
           K601]
          Length = 321

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 41/255 (16%), Positives = 80/255 (31%), Gaps = 19/255 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           SL  +D   A ++             RFSP+ Q +  A      +   Y  D +     +
Sbjct: 75  SLTFVDPGTAQVQRTVRGIVDPYHL-RFSPDMQWLVTAANRLNHV-DFYRWDGKEPTLVQ 132

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           R+        +  +  +  R + S  +D + ++ ++D+ +   +  T T  +      SP
Sbjct: 133 RVAT--GKTPSHLWIDSASRTVYSTMQD-SDELVAIDIATQKIKWRTGTGAMPADVYGSP 189

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEK 370
           D   + F     G + + V   +G   + + + K  S       +  G  +  +      
Sbjct: 190 DGRNL-FV-GLTGSDSVEVFDISGEQPRSVQRIKTGSGAHAFRAAGDGRHLFVSNRVANT 247

Query: 371 FAIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               + K D    R++              S  GR +  S         K+  ID   R 
Sbjct: 248 ----ISKIDMQALRVVDSYPAPGGPDCMDVSADGRWIYVSA----RWARKMLVIDTVERK 299

Query: 428 ETLINTPAYASDPQW 442
                    +    W
Sbjct: 300 VARAINVGKSPHGVW 314


>gi|320008752|gb|ADW03602.1| peptidase S9B dipeptidylpeptidase IV domain protein [Streptomyces
           flavogriseus ATCC 33331]
          Length = 708

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 68/212 (32%), Gaps = 32/212 (15%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR------IGNFRSMILAPR- 264
             + +PR SP+ + VAY +     ++       R    P+       +  F +     R 
Sbjct: 132 GPVIDPRPSPDGRHVAYVSRGALRVVGAEGDGDRAVAEPEDAHVSYGVAEFLAAEEMSRY 191

Query: 265 ----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S +  R L++   D A+  + +             +    + +   ++   +F +
Sbjct: 192 RGFWWSPDSDRLLVARVDDSAVQRWWI-ADPAHPGNRPAEVGYPAAGT--ANAEVRLFVT 248

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-MKKD 379
           D EG                  + +        WS  G  +   +   ++  + + +  +
Sbjct: 249 DLEGARTEVAWD----------RSRFPYLARVHWSSNGAPLLLVQARDQRSQLYLAVDTE 298

Query: 380 GSQERLLVEDSN-------LQAPTWSPSGRSL 404
               R +  D +          P W+P GR +
Sbjct: 299 SGATRTVHVDEDEIWLDLFAGVPAWAPDGRLV 330



 Score = 43.9 bits (102), Expect = 0.055,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 87/304 (28%), Gaps = 82/304 (26%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSN------ 268
             SP+  +V +            L+        +R+    + +L   A   S        
Sbjct: 27  TVSPDGTRVIFLRSASGSDRTNRLLVLDTGTGEERVAADPAALLGGSAEALSPQERARRE 86

Query: 269 ----GKRALISVQKDEAMDI---------YSVDLQSNATERLTNTLFINISASYSPDSSQ 315
               G   ++    D+A ++         Y  +L++     L       I    SPD   
Sbjct: 87  RVREGSAGIVGYAVDDAAELAAFALSGRAYVAELRAGTARALP-VPGPVIDPRPSPDGRH 145

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEA----------------SYFDPVWSPQGD 359
           + + S    +  L V+ + G   + +++ ++A                 Y    WSP  D
Sbjct: 146 VAYVS----RGALRVVGAEGDGDRAVAEPEDAHVSYGVAEFLAAEEMSRYRGFWWSPDSD 201

Query: 360 LIAFTKFSGE------------------------------KFAIGVMKKDGSQERLLVED 389
            +   +                                  +  + V   +G++  +  + 
Sbjct: 202 RLLVARVDDSAVQRWWIADPAHPGNRPAEVGYPAAGTANAEVRLFVTDLEGARTEVAWDR 261

Query: 390 SNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------INTPAYASDP 440
           S         WS +G  L+  + +D  +   L     +G   T+      I    +A  P
Sbjct: 262 SRFPYLARVHWSSNGAPLLLVQARDQRSQLYLAVDTESGATRTVHVDEDEIWLDLFAGVP 321

Query: 441 QWVG 444
            W  
Sbjct: 322 AWAP 325



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 33/176 (18%)

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESDREGKEQLYVMQSNGSDQKRIS 342
           S  LQ   T+R T  L    + + SPD ++++F    S  +   +L V+ + G+ ++R++
Sbjct: 7   SFPLQHARTQRFT--LGAPRAFTVSPDGTRVIFLRSASGSDRTNRLLVLDT-GTGEERVA 63

Query: 343 QDKEASYFDPV--WSPQ----------GDLIAFTKFSGEKFAIGVMKKDG---------S 381
            D  A         SPQ          G          +   +      G          
Sbjct: 64  ADPAALLGGSAEALSPQERARRERVREGSAGIVGYAVDDAAELAAFALSGRAYVAELRAG 123

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             R L     +  P  SP GR + +  +        L  +   G  +  +  P  A
Sbjct: 124 TARALPVPGPVIDPRPSPDGRHVAYVSR------GALRVVGAEGDGDRAVAEPEDA 173


>gi|242075108|ref|XP_002447490.1| hypothetical protein SORBIDRAFT_06g001810 [Sorghum bicolor]
 gi|241938673|gb|EES11818.1| hypothetical protein SORBIDRAFT_06g001810 [Sorghum bicolor]
          Length = 602

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 64/388 (16%), Positives = 122/388 (31%), Gaps = 64/388 (16%)

Query: 80  NLISQDSFKQKITNPD--------SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
             +   +  Q+I+N D        S      W+        TG ++  G        R+W
Sbjct: 231 TPMDVSTTAQEISNTDVTVLEGHSSEVFACAWSP-------TGSLLASGSGDSTA--RIW 281

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV--VSGII 189
            + D     G    SSP     + H      ++  T EK    + + +  E     +G  
Sbjct: 282 TIPDGP--CGSNMQSSPPGVHVLKH------FKGRTNEKSKDVTTLDWNGEGTLLATGSY 333

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
                +  RDG   + L   +  I    +++     +   + D        + DT+    
Sbjct: 334 DGQARIWSRDGDLKQTLFKHKGPIFSL-KWNKKGDFLLSGSVDK----TAIVWDTKTWEC 388

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-S 308
            ++     +  L   + +N   A  S        IY   +      +  +     ++A  
Sbjct: 389 KQQFEFHSAPTLDVDWRNNNSFATCSTDN----MIYVCKIGEQRPVKTFSGHQNEVNAIK 444

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS--YFDPVWSPQG-------- 358
           + P  S +   SD +   +++ M+ +    K +   KE +   +   WSP G        
Sbjct: 445 WDPTGSFLASCSD-DWTAKIWSMKQD----KCLFDFKEHTKEIYTIRWSPTGPGTNNPNQ 499

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDT 414
            L+  +        +  ++      RLL   S  + P     +SP G  L        D 
Sbjct: 500 QLLLASASFDSTIKLWEVE----HGRLLYSLSGHRQPVYSVAFSPDGEYLA---SGSLDQ 552

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQW 442
              ++S+   GR            +  W
Sbjct: 553 CLHIWSVK-EGRILKTYRGSGGIFEVCW 579


>gi|225677734|gb|EEH16018.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
          Length = 708

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 33/209 (15%), Positives = 70/209 (33%), Gaps = 12/209 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R+  P    I     F+P+ Q++  A+ +   +  ++      +       NF  +  A
Sbjct: 286 LRWSKPPGPVIAEPDAFTPDSQRILCASGNHISVWDLHDESWSAEIEAGDAFNFTLVDFA 345

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESD 321
             FS + +    S   +  + +    L +     + +  F N++   + P +  +     
Sbjct: 346 --FSHD-EVIAFS---EFNVHLTIFSLSTGGQRVIKSPKFANVTGYGFRPVTGHLALLVK 399

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +  + L V +    +                WSP G  +A    +     + V   +G 
Sbjct: 400 LDANDTLTVHEPGTYEVIAAVTLNTIDAQGLKWSPDGAWLAVWDSASTVPKVAVYTAEGQ 459

Query: 382 QERLLVEDSNLQA-----PTWSPSGRSLI 405
             R   E +N  +       WSP  R + 
Sbjct: 460 HYRTYSEVANDDSLGVKMIEWSPDSRLMA 488


>gi|145603105|ref|XP_362028.2| hypothetical protein MGG_04473 [Magnaporthe oryzae 70-15]
 gi|145011421|gb|EDJ96077.1| hypothetical protein MGG_04473 [Magnaporthe oryzae 70-15]
          Length = 573

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 60/248 (24%), Gaps = 53/248 (21%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              R       Q + + R SPN + +A A+ D        + D         +    + +
Sbjct: 170 YKRRLELRGHSQPIAQVRISPNGRWIASASADG----TARIWDAETGAHIDTLVGHMAGV 225

Query: 261 LAPRFSSNGKRAL--------------------ISVQKDEAMDIYSVDLQSN-------- 292
               +S +                             +D   D                 
Sbjct: 226 SCLAWSPDSGTLATGSDDKAIRLWDRITAEPAHAVGTQDGDDDAERGRTHGGTRISGASG 285

Query: 293 ------------ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
                           L          ++SP  + +   S     E +++         R
Sbjct: 286 IGVGGGGGPARGTRRPLLGHHNYVYCLAFSPKGNILASGSY---DEAVFLWDVRAGRLMR 342

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-ERLLVEDSN--LQAPTW 397
                        +   G L+      G    I +      Q  R LV + N  +    +
Sbjct: 343 SLPAHSDPVSGIDFCRDGTLVVSCSTDG---LIRIWDTATGQCLRTLVHEDNPAVTNVCF 399

Query: 398 SPSGRSLI 405
           SP+GR ++
Sbjct: 400 SPNGRYIL 407


>gi|126314005|ref|XP_001375370.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 403

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 69/206 (33%), Gaps = 45/206 (21%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLMDHTDVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSS--------------QIVFESDREGKEQLYVMQSNGSD----QK 339
                   S ++SPDSS               +VF S    K ++ + + +  +    Q+
Sbjct: 211 RGHQNWVYSCAFSPDSSMLCSVGASKAVGLHNLVFNS----KYEIPLYELSLGEVVASQR 266

Query: 340 RIS-----------------QDKEASYFDP---VWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           R++                     A+        +S  G  +A +    +      + +D
Sbjct: 267 RVTSRLVFVCRHLFPPPTPIFAGGANDGWVRALSFSHDGLHVA-SLADDKMVRFWRIDED 325

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
                 +   SN     +S  G  L 
Sbjct: 326 --FPVQVATLSNGLCCAFSTDGSVLA 349



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 1/81 (1%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 149 NGRIKIWDVYTGKLLLNLMDHTDVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 208

Query: 385 LLVEDSNL-QAPTWSPSGRSL 404
           +L    N   +  +SP    L
Sbjct: 209 VLRGHQNWVYSCAFSPDSSML 229


>gi|116199365|ref|XP_001225494.1| hypothetical protein CHGG_07838 [Chaetomium globosum CBS 148.51]
 gi|88179117|gb|EAQ86585.1| hypothetical protein CHGG_07838 [Chaetomium globosum CBS 148.51]
          Length = 879

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 45/242 (18%), Positives = 80/242 (33%), Gaps = 30/242 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++P+  K+   T    +++RVY   T  D  P  I + +   LA   S       I+  
Sbjct: 23  AYTPDGTKL--VTVGSNNLIRVY--KTGSDGEPDNIDDCQEQNLAVSAS---NTFFIAGA 75

Query: 278 KDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQIVFESDR--------EGK 325
           +D  +  Y +    +  S   + L  T       + SPD+      SD         +  
Sbjct: 76  EDGTVSYYILAATPNATSMFDKFLLRTSMPVRDVAISPDNKWCAVASDELTVKLVGIQDN 135

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
            QL  ++ +G   K +S D + S      +  G  + +      +    + K DG   R+
Sbjct: 136 TQLLTLKEHGKPTKHLSFDPKGSMLALSCT-DG--VVYVYSLTAEHPELIRKVDGIIGRM 192

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP---QW 442
             E        W P GR   F+          +  +  N   +    +  +  D     W
Sbjct: 193 ETESEASCKVAWHPDGR--AFAV---PTPTRDIQVVSKNDWEKQRAFSKGHDGDITAVAW 247

Query: 443 VG 444
             
Sbjct: 248 SP 249



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 15/153 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+ +  A A+    D L V L+  + +     +           F   G    +S  
Sbjct: 110 AISPDNKWCAVAS----DELTVKLVGIQDNTQLLTLKEHGKPTKHLSFDPKGSMLALSCT 165

Query: 278 KDEAMDIYSVDLQSNATER----LTNTLFINISAS----YSPDSSQIVFESDREGKEQLY 329
            D  + +YS+  +     R    +   +     AS    + PD     F      ++   
Sbjct: 166 -DGVVYVYSLTAEHPELIRKVDGIIGRMETESEASCKVAWHPDGR--AFAVPTPTRDIQV 222

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           V +++   Q+  S+  +       WSP G L+A
Sbjct: 223 VSKNDWEKQRAFSKGHDGDITAVAWSPNGALLA 255



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 37/177 (20%)

Query: 264 RFSSNGKRALISVQK--------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
             S + K   ++  +         +   + ++      T+ L          S+ P  S 
Sbjct: 110 AISPDNKWCAVASDELTVKLVGIQDNTQLLTLKEHGKPTKHL----------SFDPKGSM 159

Query: 316 IVFESDREGKEQLYVMQSN--------GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +   S  +G   +Y + +              R+  + EAS     W P G   AF   +
Sbjct: 160 LA-LSCTDGVVYVYSLTAEHPELIRKVDGIIGRMETESEASC-KVAWHPDGR--AFAVPT 215

Query: 368 GEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +  I V+ K+  +++       D ++ A  WSP+G  L        D    ++S 
Sbjct: 216 PTR-DIQVVSKNDWEKQRAFSKGHDGDITAVAWSPNGALLA---TAGKDKKLLIWST 268


>gi|71414277|ref|XP_809246.1| chromatin assembly factor 1 subunit B [Trypanosoma cruzi strain CL
           Brener]
 gi|70873599|gb|EAN87395.1| chromatin assembly factor 1 subunit B, putative [Trypanosoma cruzi]
          Length = 613

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 24/174 (13%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             +    R+SP+   +A A  D +        R         +  + +      +    F
Sbjct: 150 SWMPLTARWSPHGSMIASAHCDGKICLWWQEKREDGKKEEEWKDYRHLSGHVIDVYDLCF 209

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREG 324
           S + +  L S   D ++ I+ ++  +    +LT          ++ P    +   S   G
Sbjct: 210 SPDSRYLL-SAGGDGSVVIHDLEGSTVPVVQLTEVHHKFCRGVAWDPWCKYVA--SFGGG 266

Query: 325 KEQLYVMQSN--GSDQKRISQDKE-------------ASYFDPVWSPQGDLIAF 363
              L+   +       +R+    +              ++    WSP G L+A 
Sbjct: 267 PPLLFFTHTAKTTGASRRVHLTGQRKAPGDYIGESCATTFRRFGWSPDGSLVAV 320



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 52/174 (29%), Gaps = 33/174 (18%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDL--QSNATE-----RLTNTLFINI-SASYS 310
           M L  R+S +G     S   D  + ++  +        E     R  +   I++    +S
Sbjct: 152 MPLTARWSPHGSMIA-SAHCDGKICLWWQEKREDGKKEEEWKDYRHLSGHVIDVYDLCFS 210

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           PDS  ++      G   + +    GS     ++++          W P    +A   F G
Sbjct: 211 PDSRYLL---SAGGDGSVVIHDLEGSTVPVVQLTEVHHKFCRGVAWDPWCKYVA--SFGG 265

Query: 369 EKFAIGVMKK--DGSQERLLVEDSNLQAPT---------------WSPSGRSLI 405
               +            R +      +AP                WSP G  + 
Sbjct: 266 GPPLLFFTHTAKTTGASRRVHLTGQRKAPGDYIGESCATTFRRFGWSPDGSLVA 319


>gi|325273059|ref|ZP_08139368.1| peptidase S9 prolyl oligopeptidase [Pseudomonas sp. TJI-51]
 gi|324101810|gb|EGB99347.1| peptidase S9 prolyl oligopeptidase [Pseudomonas sp. TJI-51]
          Length = 602

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 42/95 (44%), Gaps = 4/95 (4%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +VF ++++  +Q+Y    +  + + ++Q+    Y D  W   G ++A  +    +  
Sbjct: 78  GDGLVFVNEQD--QQVYTQPLDDLEPRALTQNANCRYGDVQWH-DGQVLAVEERHAGQVE 134

Query: 373 IGVMKKDGSQERLLVEDSNLQA-PTWSPSGRSLIF 406
             ++        +L E ++  A PT S  G+ L +
Sbjct: 135 HRLVALRDGGCEVLAEGADFYAAPTVSGDGQRLAW 169


>gi|322820373|gb|EFZ27009.1| chromatin assembly factor 1 subunit B, putative [Trypanosoma cruzi]
          Length = 558

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 24/174 (13%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             +    R+SP+   +A A  D +        R         +  + +      +    F
Sbjct: 95  SWMPLTARWSPHGSMIASAHCDGKICLWWQEKREDGKKEEEWKDYRHLSGHVIDVYDLCF 154

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREG 324
           S + +  L S   D ++ I+ ++  +    +LT          ++ P    +   S   G
Sbjct: 155 SPDSRYLL-SAGGDGSVVIHDLEGTTVPVVQLTEVHHKFCRGVAWDPWCKYVA--SFGGG 211

Query: 325 KEQLYVMQSN--GSDQKRISQDKE-------------ASYFDPVWSPQGDLIAF 363
              L+   +       +R+    +              ++    WSP G L+A 
Sbjct: 212 PPLLFFTHTAKTTGASRRVHLTGQRKAPGDYIGESCATTFRRFGWSPDGSLVAV 265



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 52/174 (29%), Gaps = 33/174 (18%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDL--QSNATE-----RLTNTLFINI-SASYS 310
           M L  R+S +G     S   D  + ++  +        E     R  +   I++    +S
Sbjct: 97  MPLTARWSPHGSMIA-SAHCDGKICLWWQEKREDGKKEEEWKDYRHLSGHVIDVYDLCFS 155

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           PDS  ++      G   + +    G+     ++++          W P    +A   F G
Sbjct: 156 PDSRYLL---SAGGDGSVVIHDLEGTTVPVVQLTEVHHKFCRGVAWDPWCKYVA--SFGG 210

Query: 369 EKFAIGVMKK--DGSQERLLVEDSNLQAPT---------------WSPSGRSLI 405
               +            R +      +AP                WSP G  + 
Sbjct: 211 GPPLLFFTHTAKTTGASRRVHLTGQRKAPGDYIGESCATTFRRFGWSPDGSLVA 264


>gi|322496518|emb|CBZ31587.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 675

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 60/214 (28%), Gaps = 18/214 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP       A+ D      + L + R   +    G     +L+  +S  G R   S   
Sbjct: 399 FSPKGDMFVTASRDR----TIRLWNLRTGVSTVMKGGHNGFVLSCDYSPKGNRVA-SSSD 453

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + ++S    S     L           Y+     +V  S       + V  +    +
Sbjct: 454 DRTIKLWSTSSCSKVAT-LKGHEDKVYCVKYNSTGELLVSASC---DTTVRVWNAESQTK 509

Query: 339 KRISQDKEASYFDPVWS--PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               +    + F   +S    G  +  +        +           L+     +    
Sbjct: 510 LVTLRGHSLAVFSCAFSNTDNGKFVV-SGSDDRVIKLWDWGAGREIMSLVGHIGTVWTVV 568

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNET 429
           +S + R ++      G    +L   D + G    
Sbjct: 569 FSHNDRYVL-----SGSMDYELILWDSMTGTRLR 597


>gi|238879485|gb|EEQ43123.1| hypothetical protein CAWG_01360 [Candida albicans WO-1]
          Length = 511

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 104/312 (33%), Gaps = 49/312 (15%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV--- 185
           ++++V   + +             K+    S++     T   GD   R +  S       
Sbjct: 223 QVFNVTTGELVA------------KLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLA 270

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + + D     I  +    +Q ++   F P+  ++   + D      V + D R
Sbjct: 271 TGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDR----SVRIWDLR 326

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEAMDIYSVD-LQSNATERLTN 299
             +    +      +     S +GK         +V+  ++   + V+ L S       N
Sbjct: 327 TSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNE----N 381

Query: 300 TLFINI---SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQK----RISQDKEASYFD 351
                    S ++S +  QI   S DR     + +    G   K     ++      +  
Sbjct: 382 GNGHEDSVYSVAFSNNGEQIASGSLDRT----VKLWHLEGKSDKKSTCEVTYIGHKDFVL 437

Query: 352 PV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPS--GRSLIFS 407
            V  +P  + I     S ++  I   +  G+   +L    N + +   S +  G   IF+
Sbjct: 438 SVCCTPDNEYIL--SGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFA 495

Query: 408 RKKDGDTGSKLY 419
               GD  ++++
Sbjct: 496 TG-SGDCKARIW 506



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 55/167 (32%), Gaps = 26/167 (15%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFI-----NISAS 308
           +  S++   RFS +GK                 ++ +     +L +         N +AS
Sbjct: 197 DHSSVVCCVRFSRDGKFIA----TGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTAS 252

Query: 309 ---------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                    +SPD   +   ++    + + +   +     +I +  E   +   + P GD
Sbjct: 253 GDLYIRSVCFSPDGKLLATGAE---DKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGD 309

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
            +          ++ +     SQ  L +  +  +     SP G+ + 
Sbjct: 310 RLV---SGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIA 353


>gi|223985259|ref|ZP_03635341.1| hypothetical protein HOLDEFILI_02647 [Holdemania filiformis DSM
           12042]
 gi|223962771|gb|EEF67201.1| hypothetical protein HOLDEFILI_02647 [Holdemania filiformis DSM
           12042]
          Length = 651

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/163 (15%), Positives = 56/163 (34%), Gaps = 31/163 (19%)

Query: 264 RFSSNGKRALISV----QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
            FS +G+   + V    ++D          +     +LT +     S  +  D + ++F 
Sbjct: 19  TFSPDGRHIAVVVKSCNEQDGYDFTIWARAEGGEFRQLT-SFGKESSYLWD-DENTLMFL 76

Query: 320 SDREGKEQ-----------LYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S R+  +Q           +Y ++ +G +  K  +   +A   + +    G  +   +  
Sbjct: 77  SLRDPADQKRAEAGEELTGVYRLRLDGGEAVKAFTLPIQAGKLEKI--KDGLYLVTARCD 134

Query: 368 GEKFAIGVMKKDGSQERLLVEDS--------NLQAPTWSPSGR 402
                   M  +  + + + ED           + P WS +G 
Sbjct: 135 ANLPDYYKMSAE--ERKQVAEDKKKNAEFHVLDETPFWS-NGT 174



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 16/97 (16%)

Query: 343 QDKEASYFDPVWSPQGDLIAFT-----KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             K     +  +SP G  IA       +  G  F I   + +G + R L       +  W
Sbjct: 9   FRKLRGLSEVTFSPDGRHIAVVVKSCNEQDGYDFTIWA-RAEGGEFRQLTSFGKESSYLW 67

Query: 398 SPSGRSLIFSRKKD---------GDTGSKLYSIDLNG 425
                +L+F   +D         G+  + +Y + L+G
Sbjct: 68  D-DENTLMFLSLRDPADQKRAEAGEELTGVYRLRLDG 103


>gi|146070723|ref|XP_001463087.1| hypothetical protein [Leishmania infantum]
 gi|134067170|emb|CAM65434.1| conserved hypothetical protein [Leishmania infantum JPCM5]
          Length = 675

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/214 (14%), Positives = 60/214 (28%), Gaps = 18/214 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP       A+ D      + L + R   +    G     +L+  +S  G R   S   
Sbjct: 399 FSPKGDMFVTASRDR----TIRLWNLRTGVSTVMKGGHNGFVLSCDYSPKGNRVA-SSSD 453

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + ++S    S     L           Y+     +V  S       + V  +    +
Sbjct: 454 DRTIKLWSTSSCSKVAT-LKGHEDKVYCVKYNSTGELLVSASC---DTTVRVWNAESQTK 509

Query: 339 KRISQDKEASYFDPVWS--PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               +    + F   +S    G  +  +        +           L+     +    
Sbjct: 510 LVTLRGHSLAVFSCAFSNTDNGKFVV-SGSDDRVIKLWDWGAGREIMSLVGHIGTVWTVV 568

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNET 429
           +S + R ++      G    +L   D + G    
Sbjct: 569 FSHNDRYVL-----SGSMDYELILWDSMTGTRLR 597


>gi|145512006|ref|XP_001441925.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409186|emb|CAK74528.1| unnamed protein product [Paramecium tetraurelia]
          Length = 4211

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 41/233 (17%), Positives = 89/233 (38%), Gaps = 17/233 (7%)

Query: 203  IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +      +  + E +FSP+ Q +A    ++    ++ L +    R  + +    + I  
Sbjct: 2028 EKPFLKGYNSGVLEVQFSPDGQYIASVGTEN----QIKLWNAETYRFIQDLEGHTAKINT 2083

Query: 263  PRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFES 320
              FSS+    L S   D  +  +++   L+S   + +     I +    S DS ++ +  
Sbjct: 2084 LYFSSD-SSILFSGSDDRTIRKWNIKNPLKSEIVDEM-KNKVIKVQ--ISQDSKRL-YSQ 2138

Query: 321  DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI-GVMKKD 379
            D +G  Q+  +  +G  ++ I     A        P   ++A  K + +   I  +    
Sbjct: 2139 DGDGNFQILDLLKDGQSEECIFNLNNALITQFALHPTEPMVAVIKQNKQVDLINYITNDQ 2198

Query: 380  GSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             S E ++      +   T+S  G  + F+          +++I  N + E +I
Sbjct: 2199 TSLEPVIDSNQIRIMDFTFSHDG--IYFAITTSSKAI--VWNIQENTKKELII 2247


>gi|91077390|ref|XP_975277.1| PREDICTED: similar to AGAP007544-PA [Tribolium castaneum]
 gi|270001646|gb|EEZ98093.1| hypothetical protein TcasGA2_TC000506 [Tribolium castaneum]
          Length = 603

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 22/121 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP---------------KRIGNFRSMILA 262
           R+SP  Q++A A  D      + +   + D  P               K +   +  I  
Sbjct: 72  RWSPGGQQLATADDDA----NIIIWQLKTDNIPLLEGETNDKETWIVHKVMRGHKEDIYD 127

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-D 321
             +S +G + L S   D    ++    +    + LT+        S+ P    +   S D
Sbjct: 128 LCWSPDGSKLL-SGSIDNTAILWDFQ-KGKNEQILTDHKGFVQGVSWDPRGQFLATISTD 185

Query: 322 R 322
           R
Sbjct: 186 R 186



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 43/123 (34%), Gaps = 17/123 (13%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-------------QKRISQ 343
           LT       S  +SP   Q+   +D +    ++ ++++                  ++ +
Sbjct: 61  LTRHQRAVNSVRWSPGGQQLA-TADDDANIIIWQLKTDNIPLLEGETNDKETWIVHKVMR 119

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWSPSGR 402
             +   +D  WSP G  +               K  G  E++L +    +Q  +W P G+
Sbjct: 120 GHKEDIYDLCWSPDGSKLLSGSIDNTAILWDFQK--GKNEQILTDHKGFVQGVSWDPRGQ 177

Query: 403 SLI 405
            L 
Sbjct: 178 FLA 180



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/168 (8%), Positives = 53/168 (31%), Gaps = 23/168 (13%)

Query: 107 GAQ-VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
           GA   ++  ++       +++E  L D+   ++ +    +S        A   ++ I   
Sbjct: 35  GADCHVLIWQLTINENGSVKIE-ALSDLTRHQRAVNSVRWSPGGQQLATADDDANIIIWQ 93

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +  +                         ++ +       +     + +++  +SP+  K
Sbjct: 94  LKTDNIPLLE----------GETNDKETWIVHK-------VMRGHKEDIYDLCWSPDGSK 136

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
           +   + D+       L D +  +  + + + +  +    +   G+   
Sbjct: 137 LLSGSIDN----TAILWDFQKGKNEQILTDHKGFVQGVSWDPRGQFLA 180


>gi|72076365|ref|XP_780200.1| PREDICTED: similar to MGC81475 protein isoform 1
           [Strongylocentrotus purpuratus]
 gi|115924747|ref|XP_001186314.1| PREDICTED: similar to MGC81475 protein [Strongylocentrotus
           purpuratus]
          Length = 513

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 64/177 (36%), Gaps = 18/177 (10%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---------A 307
           +S +    FS +G+  + +   D  ++++  + Q+    +       +            
Sbjct: 214 KSHVECAAFSPDGQFLV-TGSVDGFVEVW--NFQTGKIRKDLKYQAEDSFMLMDDAVLCM 270

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +S D S++V    ++GK +++ +   G   +R             +S     I  + F 
Sbjct: 271 CFSRD-SEMVATGGQDGKIKVWKV-QTGQCLRRFENAHSKGVTSVKFSKDATQILSSSFD 328

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            +   I  +K   + +      S +    ++P G  L  S   DG    K+++I   
Sbjct: 329 -QSLRIHGLKSGKTLKEFRGHTSFVNEAVFAPDG-HLALSASSDGT--IKVWNIKTT 381


>gi|16759710|ref|NP_455327.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142517|ref|NP_805859.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213584470|ref|ZP_03366296.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213647620|ref|ZP_03377673.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|289825259|ref|ZP_06544538.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|60389417|sp|Q8Z8A2|6PGL_SALTI RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|25512910|pir||AG0595 conserved hypothetical protein STY0818 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16502003|emb|CAD05233.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138148|gb|AAO69719.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 331

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 72/235 (30%), Gaps = 18/235 (7%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 2   KQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 61

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPD-SSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
            Y +     A         +  S +  S D   + VF  S   G   + V +        
Sbjct: 62  AYRIAPDDGALT-FAAESALPGSPTHISTDHHGRFVFVGSYNAGN--VSVTRLQDGLPVE 118

Query: 341 ISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNL 392
           +    E          +P    +       ++  +  +  DG        E   VE +  
Sbjct: 119 LVDVVEGLDGCHSANITPDNRTLWVPALKQDRICLFTLSDDGHLVAQEPAEVNTVEGAGP 178

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
           +   + P+ R   +   +   +       + +G  E   TL   PA  SD +W  
Sbjct: 179 RHMVFHPN-RQYAYCVNELNSSVDVWQLKNPHGEIECVQTLDMMPADFSDTRWAA 232


>gi|66806133|ref|XP_636788.1| hypothetical protein DDB_G0288313 [Dictyostelium discoideum AX4]
 gi|60465202|gb|EAL63299.1| hypothetical protein DDB_G0288313 [Dictyostelium discoideum AX4]
          Length = 1040

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 48/137 (35%), Gaps = 11/137 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRS 258
           +  L       ++   FS + Q++A ++ D+     D+  +YL      +    +     
Sbjct: 690 LFTLKDKHRDEIWFITFSHDGQRLASSSKDNTIIIWDMSTIYLDQPTEPKVMFILLGHTK 749

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            +    +S N K  L S   D  + +++ +      +  T          + PD+ + V 
Sbjct: 750 EVSHLSWSPNDKYLL-SASNDSTVKLWNTN-DGTLLKTFTKHSDAVTCCGWHPDNKRFV- 806

Query: 319 ESDREGKE-QLYVMQSN 334
                G +  +Y+    
Sbjct: 807 ---SGGNDKNIYLWSIE 820


>gi|68473930|ref|XP_719068.1| transcriptional repressor of filamentous growth [Candida albicans
           SC5314]
 gi|68474135|ref|XP_718964.1| transcriptional repressor of filamentous growth [Candida albicans
           SC5314]
 gi|2494899|sp|P56093|TUP1_CANAL RecName: Full=Transcriptional repressor TUP1
 gi|2245634|gb|AAB63195.1| transcriptional repressor TUP1 [Candida albicans]
 gi|46440760|gb|EAL00063.1| transcriptional repressor of filamentous growth [Candida albicans
           SC5314]
 gi|46440868|gb|EAL00170.1| transcriptional repressor of filamentous growth [Candida albicans
           SC5314]
          Length = 514

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 49/312 (15%), Positives = 104/312 (33%), Gaps = 49/312 (15%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV--- 185
           ++++V   + +             K+    S++     T   GD   R +  S       
Sbjct: 226 QVFNVTTGELVA------------KLIDESSNENKDDNTTASGDLYIRSVCFSPDGKLLA 273

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     + + D     I  +    +Q ++   F P+  ++   + D      V + D R
Sbjct: 274 TGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGSGDR----SVRIWDLR 329

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALI-----SVQKDEAMDIYSVD-LQSNATERLTN 299
             +    +      +     S +GK         +V+  ++   + V+ L S       N
Sbjct: 330 TSQCSLTLSIEDG-VTTVAVSPDGKLIAAGSLDRTVRVWDSTTGFLVERLDSGNE----N 384

Query: 300 TLFINI---SASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQK----RISQDKEASYFD 351
                    S ++S +  QI   S DR     + +    G   K     ++      +  
Sbjct: 385 GNGHEDSVYSVAFSNNGEQIASGSLDRT----VKLWHLEGKSDKKSTCEVTYIGHKDFVL 440

Query: 352 PV-WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPS--GRSLIFS 407
            V  +P  + I     S ++  I   +  G+   +L    N + +   S +  G   IF+
Sbjct: 441 SVCCTPDNEYIL--SGSKDRGVIFWDQASGNPLLMLQGHRNSVISVAVSLNSKGTEGIFA 498

Query: 408 RKKDGDTGSKLY 419
               GD  ++++
Sbjct: 499 TG-SGDCKARIW 509



 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 55/167 (32%), Gaps = 26/167 (15%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFI-----NISAS 308
           +  S++   RFS +GK                 ++ +     +L +         N +AS
Sbjct: 200 DHSSVVCCVRFSRDGKFIA----TGCNKTTQVFNVTTGELVAKLIDESSNENKDDNTTAS 255

Query: 309 ---------YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                    +SPD   +   ++    + + +   +     +I +  E   +   + P GD
Sbjct: 256 GDLYIRSVCFSPDGKLLATGAE---DKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGD 312

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
            +          ++ +     SQ  L +  +  +     SP G+ + 
Sbjct: 313 RLV---SGSGDRSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIA 356


>gi|229489903|ref|ZP_04383758.1| WD-40 repeat protein [Rhodococcus erythropolis SK121]
 gi|229323199|gb|EEN88965.1| WD-40 repeat protein [Rhodococcus erythropolis SK121]
          Length = 1280

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/206 (11%), Positives = 58/206 (28%), Gaps = 20/206 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS----MILA 262
            P     +    FSP+ + +       +  LRV+ +    + +        +      L 
Sbjct: 763 LPHPADGIVTATFSPDGRFL--VAGGRQATLRVWDVAKWGEESAPIFATEPNGTTVHYLG 820

Query: 263 PRFSSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
             FS +G+     +  ++      S   +      LT         +Y  D +++   S 
Sbjct: 821 VAFSPDGRELAAGTTGREVVRWDMSDPARPTPLPALTGFSSYVNELNYGKDGTRLAAGSS 880

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK--D 379
                 + V           +     +     +S  G  +     +G      +      
Sbjct: 881 ---DNSVRVWDPRTGALIE-TLPDSGAVTTVDYSDDGRNLVTGGLNGVTRVWALPGPVWA 936

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
           G+++ +           ++  G  L+
Sbjct: 937 GARDTIFTSP-------FAADGSRLV 955



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/199 (15%), Positives = 56/199 (28%), Gaps = 49/199 (24%)

Query: 261 LAPRFSSNGK---------RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            A  +S +G+          AL  V   +     ++ +      +            +SP
Sbjct: 682 FAVAYSPDGRLLATGGAGGAALWDVSDPKNPVRGTLPVDGERVVQ---------DMEFSP 732

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIA------ 362
           D +++V  +       +     + S                    +SP G  +       
Sbjct: 733 DGTKLVAGTS---TPDVLRWNIDTSTNAIALPALPHPADGIVTATFSPDGRFLVAGGRQA 789

Query: 363 ------FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
                   K+  E   I   + +G+    L          +SP GR L       G TG 
Sbjct: 790 TLRVWDVAKWGEESAPIFATEPNGTTVHYL-------GVAFSPDGRELA-----AGTTGR 837

Query: 417 KLYSIDLNGRNETLINTPA 435
           ++   D++         PA
Sbjct: 838 EVVRWDMS-DPARPTPLPA 855


>gi|319643701|ref|ZP_07998318.1| dipeptidyl aminopeptidase [Bacteroides sp. 3_1_40A]
 gi|317384731|gb|EFV65693.1| dipeptidyl aminopeptidase [Bacteroides sp. 3_1_40A]
          Length = 594

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 106/322 (32%), Gaps = 59/322 (18%)

Query: 174 NSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP--------RFSPNQ 223
            SR+ +VS +   V  ++   +  + +DG N   +       ++E         R+SP+ 
Sbjct: 9   ASRVAYVSRNNIYVESLVDGKINQLTQDGNNE--IVNGTFDWVYEEEFNCRDGFRWSPDG 66

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPK-------RIGNFRSMILAPRFSSNG---KRAL 273
           Q +AY   D +      +++      PK       + G   S +     S++G       
Sbjct: 67  QYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGGNTTWLA 126

Query: 274 --------ISVQKDEAMDIYSVDLQSNATERLTNTLFI---------------------- 303
                      + +       + +Q     + TN ++I                      
Sbjct: 127 LPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLET 186

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           N +  +   +    +ES+R+G   LY +  +G + K I+Q       +         + F
Sbjct: 187 NDNVRWLKGNKYFTWESERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADMDKGFVYF 246

Query: 364 TKFSGEKFAIGVMKK----DGSQERL-LVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSK 417
                      + +     +G  +RL  V+ S       SPSG+  +      +      
Sbjct: 247 IASPDNFTQRYLYRARLFGNGEVKRLSPVDQSGQHRYIMSPSGKWAVHTFSNSETPPVID 306

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           + S   + ++  LI   A A +
Sbjct: 307 MVSFPAH-KSIRLITDNAKAKE 327



 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 52/151 (34%), Gaps = 38/151 (25%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-------------- 352
           A +SPD+S++ + S    +  +YV         +++QD      +               
Sbjct: 3   AKFSPDASRVAYVS----RNNIYVESLVDGKINQLTQDGNNEIVNGTFDWVYEEEFNCRD 58

Query: 353 --VWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
              WSP G  IA+  +   G  +   +   D    ++       + P          + +
Sbjct: 59  GFRWSPDGQYIAYWQSDTQGTGWFDIINNVDSIYPKI------QRFP----------YPK 102

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
               ++  K+  +  +G N T +  P  A +
Sbjct: 103 AGTANSAVKVGYVSADGGNTTWLALPGDARN 133



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 39/251 (15%), Positives = 80/251 (31%), Gaps = 28/251 (11%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL-TPSRDQILFEPR 218
           D IY  I            F      +      +  +  DG N  +L  P   +  + PR
Sbjct: 89  DSIYPKIQR----------FPYPKAGTANSAVKVGYVSADGGNTTWLALPGDARNHYIPR 138

Query: 219 --FSPNQQKVAYATY-DDEDILRVYLMDTRIDRAPKRIGNFRSMILA----PRFSSNGKR 271
             F P   ++        ++  +V++     +       +  +  L      R+    K 
Sbjct: 139 MEFIPGCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQDAAWLETNDNVRWLKGNKY 198

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFI---NISASYSPDSSQIVFESDREGKEQL 328
                ++D    +Y V       + +T   F     + A    D   + F +  +   Q 
Sbjct: 199 FTWESERDGWRHLYRVSRDGKEIKPITQGAFDYIQEVGADM--DKGFVYFIASPDNFTQR 256

Query: 329 YVMQS---NGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGEKFAIGVMK-KDGSQE 383
           Y+ ++      + KR+S   ++     + SP G     T   S     I ++        
Sbjct: 257 YLYRARLFGNGEVKRLSPVDQSGQHRYIMSPSGKWAVHTFSNSETPPVIDMVSFPAHKSI 316

Query: 384 RLLVEDSNLQA 394
           RL+ +++  + 
Sbjct: 317 RLITDNAKAKE 327



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 59/232 (25%), Gaps = 65/232 (28%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-----------------ISA 307
           FS +  R     + +    IY   L      +LT                          
Sbjct: 5   FSPDASRVAYVSRNN----IYVESLVDGKINQLTQDGNNEIVNGTFDWVYEEEFNCRDGF 60

Query: 308 SYSPDSSQIVF-ESDREGKEQLYVMQSNGS---DQKRISQDKEASYFDPV----WSPQGD 359
            +SPD   I + +SD +G     ++ +  S     +R    K  +    V     S  G 
Sbjct: 61  RWSPDGQYIAYWQSDTQGTGWFDIINNVDSIYPKIQRFPYPKAGTANSAVKVGYVSADGG 120

Query: 360 ----------------------------LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                                        I     +     + + K   +    +  D +
Sbjct: 121 NTTWLALPGDARNHYIPRMEFIPGCNELFIQQMNRAQNTNKVWIAKIGENTPVNIFTDQD 180

Query: 392 ------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                      W    +   +  ++DG     LY +  +G+    I   A+ 
Sbjct: 181 AAWLETNDNVRWLKGNKYFTWESERDG--WRHLYRVSRDGKEIKPITQGAFD 230


>gi|313225014|emb|CBY20807.1| unnamed protein product [Oikopleura dioica]
          Length = 321

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 73/210 (34%), Gaps = 20/210 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FS +   +A A+ D      + + +         I   +  I    +S++    L S  
Sbjct: 37  KFSEDGLWLASASADR----TIRIWNAYDGNIEAVIAGHKLGISEIAWSND-STLLCSAS 91

Query: 278 KDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D+ + I+  D+ +    + L       +   ++P SS IV  S     E + +      
Sbjct: 92  DDKTVKIW--DVGTRKCLKTLKGHTNYVLCCGFNPQSSLIVSGSF---DESVRIWDVKTG 146

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
              +             ++  G LI  + + G    I      G   + L+++     P 
Sbjct: 147 MALKCLPAHSDPVSAVHFNRDGSLIVSSSYDG-LCRIW-CTSTGQCLKTLIDNDPTNPPV 204

Query: 397 ----WSPSGRSLIFSRKKDGDTGSKLYSID 422
               +SP+G+ ++ +     D   KL+   
Sbjct: 205 SYVKFSPNGKYILAATL---DNTLKLWDYS 231


>gi|296444930|ref|ZP_06886892.1| WD-40 repeat protein [Methylosinus trichosporium OB3b]
 gi|296257598|gb|EFH04663.1| WD-40 repeat protein [Methylosinus trichosporium OB3b]
          Length = 337

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 68/197 (34%), Gaps = 17/197 (8%)

Query: 141 GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG 200
           G++  +     R +A T +  + + +  +KG +   +   ++  ++      L V    G
Sbjct: 66  GRRLITGGDDGRVVA-TDAAGVSEIVADQKGRWIDALAARADGTIAWSAGRELRVRSPKG 124

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
                  PS  + +    F P   ++A A Y+        L       AP+ +  ++   
Sbjct: 125 EVKTLELPSTSRGI---AFFPKGYRLAIAHYNGAS-----LWFPNAAAAPETL-EWKGSH 175

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           L    S +GK  L S+Q++        D       R+        S S+S D   +    
Sbjct: 176 LDAAVSPDGKFVLTSMQENMLHGWRVAD---GKNLRMAGYPAKTRSLSWSADGKWLA--- 229

Query: 321 DREGKEQLYVMQSNGSD 337
              G +   V    G D
Sbjct: 230 -TSGADACIVWPFQGKD 245



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 2/64 (3%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           + + + S+ D   SP G  +  +          V   DG   R+    +  ++ +WS  G
Sbjct: 168 TLEWKGSHLDAAVSPDGKFVLTSMQENMLHGWRV--ADGKNLRMAGYPAKTRSLSWSADG 225

Query: 402 RSLI 405
           + L 
Sbjct: 226 KWLA 229


>gi|258653111|ref|YP_003202267.1| prolyl oligopeptidase [Nakamurella multipartita DSM 44233]
 gi|258556336|gb|ACV79278.1| Prolyl oligopeptidase [Nakamurella multipartita DSM 44233]
          Length = 713

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 57/188 (30%), Gaps = 32/188 (17%)

Query: 261 LAPRFSSNGKRALISVQKDEAMD--IYSVDLQSNATE----RLTNTLFINISASYSPDSS 314
            A R S +G+    +V +  +    I   ++          R T      +  ++ PD+S
Sbjct: 131 TAARVSPDGRLLAYAVSEGGSDWRTIRVREVAGGVDRPDELRWTKW----VDPTWLPDAS 186

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             ++          Y   +       ++    A          G+L+     +G      
Sbjct: 187 GFLYWR--------YPEPAGAGRGGALTDAMGA----------GELVLHRLVAGSGPPQA 228

Query: 375 VMKKD--GSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
             +    G  E +           P  +P GR L+ +     D+ S + +  L      +
Sbjct: 229 ADRAANPGPDEVIWTPPDRDWLADPWVAPDGRWLVLTSSPGTDSRSLICAHRLRTDQGRV 288

Query: 431 INTPAYAS 438
           +  PA   
Sbjct: 289 VIDPAAVP 296


>gi|254477555|ref|ZP_05090941.1| transcriptional regulator, sarp family [Ruegeria sp. R11]
 gi|214031798|gb|EEB72633.1| transcriptional regulator, sarp family [Ruegeria sp. R11]
          Length = 512

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 9/109 (8%)

Query: 49  SIAFTKFV------SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
            I    FV      +   LG  +SE + + L RS  F +        +  +P  +     
Sbjct: 119 PITVLPFVHRTPGEAKSPLGALISEELVRHLSRSHAFCV--TSYLASRQFDPHQVRPSDV 176

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW 151
           ++  GA  LV+G V   G+ + R++  L D +  K I  +++  + +  
Sbjct: 177 YSVAGANYLVSGTVTVTGQ-QYRLQVDLHDTEREKVIWSREYRDALSGL 224


>gi|148240468|ref|YP_001225855.1| hypothetical protein SynWH7803_2132 [Synechococcus sp. WH 7803]
 gi|147849007|emb|CAK24558.1| Conserved hypothetical protein [Synechococcus sp. WH 7803]
          Length = 166

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 46/133 (34%), Gaps = 10/133 (7%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTK 365
            S S D S++   +D+ G+  + +         ++    +   +  P  S  G  +A   
Sbjct: 28  PSLSGDGSKLAVIADQRGRPTVQLRDLKSGQPLQLRHFSRHQPHSSPSLSWNGRYLAAVI 87

Query: 366 FSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID- 422
             G +  + +  +   +     L    +    + +P  R L     + G    +++++  
Sbjct: 88  QRGNRRLVLIEDRLTGRAHPLRLPAGRDPVTLSLAPDARELAVQTAEQGRWQVEVFNLSE 147

Query: 423 ------LNGRNET 429
                   GR ET
Sbjct: 148 LLEADRAGGRRET 160



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 54/138 (39%), Gaps = 5/138 (3%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G + R  +        +P  S +  K+A    D      V L D +  + P ++ +F   
Sbjct: 11  GRSRRAPSGLLSAQQQQPSLSGDGSKLA-VIADQRGRPTVQLRDLKSGQ-PLQLRHFSRH 68

Query: 260 I--LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQI 316
               +P  S NG+     +Q+     +   D  +     L      + ++ S +PD+ ++
Sbjct: 69  QPHSSPSLSWNGRYLAAVIQRGNRRLVLIEDRLTGRAHPLRLPAGRDPVTLSLAPDAREL 128

Query: 317 VFESDREGKEQLYVMQSN 334
             ++  +G+ Q+ V   +
Sbjct: 129 AVQTAEQGRWQVEVFNLS 146


>gi|47218357|emb|CAG01878.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1199

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 72/208 (34%), Gaps = 21/208 (10%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGN-FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
               +   +L    ++   + + +  +  I +  FS +G +   S    + +  Y+  L 
Sbjct: 582 STGKLYFDWLNKNSVESLSRLVIHPHQGSIYSACFSHDGTKIAASGAY-KTLKAYTFPLS 640

Query: 291 SNATERLTNTLFINIS---ASYSPDSSQIV-FESDREGKEQLYVMQSNGSDQKRIS-QDK 345
               E+LT     +      ++SPD   +    SDR    ++ V  +  +   R+  ++ 
Sbjct: 641 ----EKLTEIQAHDDEVLCCAFSPDDRLLATCSSDR----KVKVWNAERAMLLRVFEEEH 692

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
           E       ++     +     S ++F    +  + K  SQ  +      +    +SP   
Sbjct: 693 EEQVNHCQFTNTMRRLLLVTCSNDEFMNVKLWNLNKPSSQNTMFGHTEPVNHCCFSPDDT 752

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETL 430
            +        D   KL+ +      +T+
Sbjct: 753 YV---STASNDGTVKLFQVSHANEWKTI 777


>gi|66809425|ref|XP_638435.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
 gi|74996874|sp|Q54PE0|PWP2_DICDI RecName: Full=Periodic tryptophan protein 2 homolog
 gi|60467039|gb|EAL65080.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
          Length = 922

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 68/199 (34%), Gaps = 13/199 (6%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N  Y        +     +   + +A+   +   +L V+   +      ++  ++   
Sbjct: 304 GFNQLYKLNISSHGISTSAINNTGEWLAFGCSELGQLL-VWEWRSETYILKQQGHSYNMN 362

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSP-DSSQIV 317
            +A  +S +G+    +  +D  + I+  +  S       T       +  YSP  S  +V
Sbjct: 363 TVA--YSPDGQTIA-TGGEDGKVKIW--NTTSGYCYITFTEHEGPVTAVKYSPVSSQNVV 417

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           F +  +G  + + +     + +      +  +      P G++IA        F I V  
Sbjct: 418 FSAGVDGTIRAFDL-VRYRNFRTFVSPNKTQFSCLAVDPSGEIIAAGSLD--SFEIYVWS 474

Query: 378 KDGSQERLLVEDSNLQAPT 396
                 RL    S  Q+P 
Sbjct: 475 VRTG--RLTDILSGHQSPV 491


>gi|311067096|ref|YP_003972019.1| hypothetical protein BATR1942_00640 [Bacillus atrophaeus 1942]
 gi|310867613|gb|ADP31088.1| hypothetical protein BATR1942_00640 [Bacillus atrophaeus 1942]
          Length = 347

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 42/262 (16%), Positives = 89/262 (33%), Gaps = 47/262 (17%)

Query: 209 SRDQILFEPRFSPNQQK--VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF- 265
             D++   P F+ +QQ   + Y   +D++ +R++ +D + +   K+   ++ +  A    
Sbjct: 66  HEDKLTSYPAFALDQQHDVLYYTGNNDQNEMRLFKLDLKSN---KKSTLYKGVESADSLF 122

Query: 266 -SSNGKRALISV-QKDE-AMDIYSVDLQSNATERLTNTLFINI------SASYSPDSSQI 316
            S +  +    +   DE    + S DL++   E +      +       S  Y+ D   +
Sbjct: 123 LSKDQTKIYFRLGSPDESNFRLASFDLKTKRYENV--FPAADDQDDSVSSFFYNSDKDSL 180

Query: 317 VF--------------ESDREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDL 360
                            +++    +   +     +Q  I +      F  D   S  G  
Sbjct: 181 ALLHYSVEEDYKKTDEANEKGTDPEPTKIHFAAGNQNGIDELTSLDQFISDIAVSADGKS 240

Query: 361 IAFTKFSGEKFA----IGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFSRKK 410
           I FT +  +       I +M     +   ++ D           P +S  G+++ F  + 
Sbjct: 241 ILFTSYVEKGAEQTAKINLMNVKTKKYEPIISDQKDFTLLIDAQPQFSKDGKTIYFLAEA 300

Query: 411 DGDTGSKLYSIDLNGRNETLIN 432
            G    K    D  GR   +  
Sbjct: 301 KGAKLLK----DETGREAKVRT 318



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 40/113 (35%), Gaps = 10/113 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATY---DDEDILRVYLMDTRIDRAPKRIGNFR 257
            N      S DQ + +   S + + + + +Y     E   ++ LM+ +  +    I + +
Sbjct: 216 QNGIDELTSLDQFISDIAVSADGKSILFTSYVEKGAEQTAKINLMNVKTKKYEPIISDQK 275

Query: 258 SMIL----APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
              L     P+FS +GK      +   A     +  ++    ++      N  
Sbjct: 276 DFTLLIDAQPQFSKDGKTIYFLAEAKGAK---LLKDETGREAKVRTVYSYNTE 325


>gi|301157371|emb|CBW16860.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|323129092|gb|ADX16522.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 331

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 72/235 (30%), Gaps = 18/235 (7%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + ++ +  + 
Sbjct: 2   KQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQPMVVSPDKRYLYVGMRPEFRVL 61

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPD-SSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
            Y +     A         +  S +  S D   + VF  S   G   + V +        
Sbjct: 62  AYRIAPDDGALT-FAAESALPGSPTHISTDHHGRFVFVGSYNAGN--VSVTRLQDGLPVE 118

Query: 341 ISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNL 392
           +    E          +P    +       ++  +  +  DG        E   VE +  
Sbjct: 119 LVDVVEGLDGCHSANITPDNRTLWVPALKQDRICLFTLSDDGHLVAQEPAEVNTVEGAGP 178

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
           +   + P+ R   +   +   +       + +G  E   TL   PA  SD +W  
Sbjct: 179 RHMVFHPN-RQYAYCVNELNSSVDVWQLKNPHGEIECVQTLDMMPADFSDTRWAA 232


>gi|294950503|ref|XP_002786662.1| Polyadenylation factor subunit, putative [Perkinsus marinus ATCC
           50983]
 gi|239900954|gb|EER18458.1| Polyadenylation factor subunit, putative [Perkinsus marinus ATCC
           50983]
          Length = 448

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 66/207 (31%), Gaps = 20/207 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + PN Q+V   +   E      L +         +    + I A +++ +G      +  
Sbjct: 116 WQPNGQRVLTGSQTGEFT----LWNGVHFNFENLMQAHTASIRAMKWTPDGANL---LSG 168

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D +  I   +      +++          S SP  ++ V  +D        +       +
Sbjct: 169 DSSGLIKVWNSNYFCFKQIEAHQETLRDLSVSPSGAKFVSCADE---NAAKLWDFPTFKE 225

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSNLQAPT 396
           +R             W P   L+A      + F I +     S+    +    S +    
Sbjct: 226 ERTFNGHGWEVKTIDWHPSMSLVA---TGSKDFNIKLWDPRQSEAITTIYAHKSVVGRVR 282

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           WSP+G+ LI      G     +  +D+
Sbjct: 283 WSPNGQWLI-----SGSRDQLIKMMDV 304



 Score = 43.5 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 63/175 (36%), Gaps = 8/175 (4%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + D                +    + P+   VA  + D      + L D R   A   I 
Sbjct: 217 LWDFPTFKEERTFNGHGWEVKTIDWHPSMSLVATGSKD----FNIKLWDPRQSEAITTIY 272

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDS 313
             +S++   R+S NG+   IS  +D+ + +  +D++  + +++         S S+ P +
Sbjct: 273 AHKSVVGRVRWSPNGQWL-ISGSRDQLIKM--MDVRKMSIDKVFKGHTREITSLSWHPTA 329

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             I      +G+   + +  +    + +    + S +   + P G L+       
Sbjct: 330 VGIFCSGSYDGQICHWDVAQDSKPIESLIGAHDGSIWALAYHPLGHLMVSGSHDN 384


>gi|226287695|gb|EEH43208.1| WD repeat-containing protein [Paracoccidioides brasiliensis Pb18]
          Length = 515

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 58/139 (41%), Gaps = 9/139 (6%)

Query: 180 VSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           ++E +VS     ++ + D   +N          + +    FSP+   +A A++D+     
Sbjct: 370 ITERLVSASDDFTMFLWDPVSSNKPVARMLGHQKEVNHVTFSPDGAYIASASFDN----H 425

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-L 297
           V L + R  +    +      +    FS++  R L+S  KD  + ++  D+++      L
Sbjct: 426 VKLWNARDGKFISSLRGHVGAVYQCCFSAD-SRLLVSSSKDTTLKVW--DVRTGKLLMDL 482

Query: 298 TNTLFINISASYSPDSSQI 316
              L    +  +SPD  ++
Sbjct: 483 PGHLDEVYAVDWSPDGEKV 501



 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 34/121 (28%), Gaps = 5/121 (4%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                 ++   R+   +  +    FS +G     S   D  + +++          L   
Sbjct: 386 WDPVSSNKPVARMLGHQKEVNHVTFSPDGAYIA-SASFDNHVKLWNA-RDGKFISSLRGH 443

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           +       +S DS  +V  S       L V                   +   WSP G+ 
Sbjct: 444 VGAVYQCCFSADSRLLVSSSK---DTTLKVWDVRTGKLLMDLPGHLDEVYAVDWSPDGEK 500

Query: 361 I 361
           +
Sbjct: 501 V 501



 Score = 36.9 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 30/99 (30%), Gaps = 8/99 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + I   S       + +  +         +    + +   +S    L+  +   
Sbjct: 409 TFSPDGAYIASASF---DNHVKLWNARDGKFISSLRGHVGAVYQCCFSADSRLLVSSSKD 465

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSL 404
                + V      +  + +     +     WSP G  +
Sbjct: 466 TT---LKVWDVRTGKLLMDLPGHLDEVYAVDWSPDGEKV 501


>gi|224089497|ref|XP_002308733.1| predicted protein [Populus trichocarpa]
 gi|222854709|gb|EEE92256.1| predicted protein [Populus trichocarpa]
          Length = 448

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 8/147 (5%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           D  +     SP+ + +        D     L+D++  +    +        A  +  +G 
Sbjct: 278 DWPVNHTSLSPDGKLLVIV----GDNPDGILVDSQTGKPIMSLCGHVDFSFASAWHPDG- 332

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R   +  +D+   I+     S +   L   L    S  ++ D     F S  E  + ++V
Sbjct: 333 RIFATGNQDKTCRIWDARNLSKSVAVLKGNLGAIRSIRFTSDGQ---FMSMAEPADFVHV 389

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQ 357
             +    +K    D         +SP 
Sbjct: 390 YDAKNGFEKEQEIDFFGEISGVSFSPD 416


>gi|293336689|ref|NP_001168207.1| hypothetical protein LOC100381963 [Zea mays]
 gi|195623638|gb|ACG33649.1| WD-repeat protein 8 [Zea mays]
 gi|223946745|gb|ACN27456.1| unknown [Zea mays]
          Length = 470

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 65/197 (32%), Gaps = 11/197 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+ +   Y          V            +I    + I   R+S + +  L + + 
Sbjct: 55  WAPDSE---YILCGLYKRPMVQAWSLSQPDWTCKIDEGPAGIAYARWSPDSRHILTTSEF 111

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
              + ++S+   +    +        +S  ++ D       + R+ K+ + ++  +  + 
Sbjct: 112 QLRLTVWSLVNTACVHVQWPKHGSKGVS--FTKDGKFAAICTRRDCKDYINLLSCHSWEI 169

Query: 339 KRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSN-LQA 394
             +            WSP    ++ +      ++ + +   DG    + L  E    ++ 
Sbjct: 170 MTVFAIDTVDLAGVEWSPYDSAIVVWDSLL--EYKVLIYSPDGRCLFKYLAYESGLGVKT 227

Query: 395 PTWSPSGRSLIFSRKKD 411
             WSP G+ L       
Sbjct: 228 VAWSPCGQFLAVGSYDQ 244



 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 57/156 (36%), Gaps = 15/156 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+SP+ + +   +   E  LR+ +                       F+ +GK A I  +
Sbjct: 97  RWSPDSRHILTTS---EFQLRLTVWSLVNTACVHVQWPKHGSK-GVSFTKDGKFAAICTR 152

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI----SASYSP-DSSQIVFESDREGKEQLYVMQ 332
           +D    I  +   S     +     I+        +SP DS+ +V++S  E K  +Y   
Sbjct: 153 RDCKDYINLLSCHS---WEIMTVFAIDTVDLAGVEWSPYDSAIVVWDSLLEYKVLIY--S 207

Query: 333 SNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +G    K ++ +         WSP G  +A   + 
Sbjct: 208 PDGRCLFKYLAYESGLGVKTVAWSPCGQFLAVGSYD 243


>gi|168240643|ref|ZP_02665575.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194447708|ref|YP_002044813.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|226706810|sp|B4TC39|6PGL_SALHS RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|194406012|gb|ACF66231.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|205340338|gb|EDZ27102.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
          Length = 331

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 72/235 (30%), Gaps = 18/235 (7%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 2   KQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 61

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPD-SSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
            Y +     A         +  S +  S D   + VF  S   G   + V +        
Sbjct: 62  AYRIAPDDGALT-FAAESALPGSPTHISTDHHGRFVFVGSYNAGN--VSVTRLQDGLPVE 118

Query: 341 ISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNL 392
           +    E          +P    +       ++  +  +  DG        E   VE +  
Sbjct: 119 LVDVVEGLDGCHSANITPDNRTLWVPALKQDRICLFTLSDDGHLVAQEPAEVNTVEGAGP 178

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
           +   + P+ R   +   +   +       + +G  E   TL   PA  SD +W  
Sbjct: 179 RHMVFHPN-RQYAYCVNELNSSVDVWQLKNPHGEIECVQTLDMMPADFSDTRWAA 232


>gi|168037636|ref|XP_001771309.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162677398|gb|EDQ63869.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 513

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/244 (12%), Positives = 70/244 (28%), Gaps = 62/244 (25%)

Query: 218 RFSPNQQKVAYATYD--------------------------------------------- 232
           RFSP+ Q +  ++ D                                             
Sbjct: 221 RFSPDGQFLVSSSVDGFIEVWDYLTGKLKKDLQYQGADTFMMHDEAVLSIAFSKDSEMLA 280

Query: 233 -DEDILRVYLMDTRIDRAPKRIGNFRSM-ILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                 ++ +   R  +  +R        + +  FS +G + L S   D    ++ +   
Sbjct: 281 SGSQDGKIKVWRIRTGQCLRRFERAHGQGVTSVSFSRDGAQVL-SSSFDGTARLHGL-KS 338

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ----SNGSDQKRISQDKE 346
               +           A ++ D ++++  +  +G  +++ ++              +  +
Sbjct: 339 GKTLKEFRGHTSYVNDAIFTSDGTRVI-TASSDGSVKVWDLKTTDCLQTFKPPPPLRGGD 397

Query: 347 ASYFDPVWSPQG-DLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSG 401
           A+       P+  + I     +    AI VM   G   + L     E  +    T SP G
Sbjct: 398 ATVNSVHLMPKNPEHIVVCNRAS---AIYVMTLQGQVVKSLSSGKREGGDFVGATVSPKG 454

Query: 402 RSLI 405
             + 
Sbjct: 455 DWIY 458


>gi|145616791|ref|XP_361259.2| hypothetical protein MGG_10942 [Magnaporthe oryzae 70-15]
 gi|145022911|gb|EDK06616.1| hypothetical protein MGG_10942 [Magnaporthe oryzae 70-15]
          Length = 912

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 80/283 (28%), Gaps = 70/283 (24%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAP---RFS 266
                PR SPN    A+   D+     V L        P R+ N  +      P    +S
Sbjct: 170 PANNPPRISPNGLWEAFVQQDN-----VVLRAAGSTGTPTRLSNDGTADDFYDPETIVWS 224

Query: 267 SNGKRALISVQKDEAMD-------IYSVDLQSNATERLTNTLFINIS------------- 306
            + K+ ++   +              ++  Q     +L      +I              
Sbjct: 225 PDSKKLVVYRVRPGFAREVVRVEAAPTLQKQPKVHTQLYPKPGDDIDQEQPVLFHVGEQL 284

Query: 307 ------------------ASYSPDSSQIVFESDREGKEQLYVMQSNG--SDQKRI----- 341
                               +  DSS+ VF+  + G  Q  V+  +G     + I     
Sbjct: 285 GSIEIESKLFPTPWQLSWPVWRRDSSEFVFDYQQRGHSQARVIAVDGVTGTPRAIVTEDA 344

Query: 342 -SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNLQAP---- 395
            +       +          + +         + ++   DG+ E++   D  ++      
Sbjct: 345 DTFVYADRRYRYDIGDGSQEMLWISERDGWRHLYLVSTPDGTMEQITKGDWLVRDVLGVD 404

Query: 396 ------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                  +S +G   I + +        ++ +  NG + T + 
Sbjct: 405 QVKRLIWFSANG---IDADEGRDPYFKHVFRVSFNGSDLTRLT 444



 Score = 43.1 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 63/182 (34%), Gaps = 19/182 (10%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SAS---YSPDSSQIV 317
           PR S NG       Q +    +      +    RL+N    +         +SPDS ++V
Sbjct: 175 PRISPNGLWEAFVQQDN---VVLRAAGSTGTPTRLSNDGTADDFYDPETIVWSPDSKKLV 231

Query: 318 FESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
               R G   ++  +++  + QK+    K  +   P      D     +     F +G  
Sbjct: 232 VYRVRPGFAREVVRVEAAPTLQKQ---PKVHTQLYPKPGDDID-----QEQPVLFHVGEQ 283

Query: 377 KKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTP 434
                 E  L      L  P W       +F  ++ G + +++ ++D + G    ++   
Sbjct: 284 LGSIEIESKLFPTPWQLSWPVWRRDSSEFVFDYQQRGHSQARVIAVDGVTGTPRAIVTED 343

Query: 435 AY 436
           A 
Sbjct: 344 AD 345



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 20/155 (12%), Positives = 46/155 (29%), Gaps = 17/155 (10%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFI-----NISASYS-PDSS 314
           P +  +    +   Q+        + +         +           +    Y   D S
Sbjct: 303 PVWRRDSSEFVFDYQQRGHSQARVIAVDGVTGTPRAIVTEDADTFVYADRRYRYDIGDGS 362

Query: 315 Q-IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-------- 365
           Q +++ S+R+G   LY++ +     ++I++                LI F+         
Sbjct: 363 QEMLWISERDGWRHLYLVSTPDGTMEQITKGDWLVRDVLGVDQVKRLIWFSANGIDADEG 422

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                  +  +  +GS    L +        +SP 
Sbjct: 423 RDPYFKHVFRVSFNGSDLTRLTKVDASHEVVFSPD 457


>gi|145355288|ref|XP_001421896.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582135|gb|ABP00190.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1448

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 67/199 (33%), Gaps = 32/199 (16%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---- 307
            +G     + A  +  +G+   + +  +  + I + D    +  R  +    +  A    
Sbjct: 120 VVGEIPCGVRAFAWCPDGETCAV-MSAEGRVVIMTRDFYPVSETR-GDGGADDEDAANET 177

Query: 308 ------SYSPDSSQIVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDP------- 352
                 S+  D       S   + G+  + V +  G+  + + + + AS   P       
Sbjct: 178 TSGATISWRGDGRYFACSSTNAKTGETTMRVWEREGARVESVGETRTASSGTPATLAAGD 237

Query: 353 -----VWSPQGDLIAFTKFSGEKFAIGVM-----KKDGSQERLLVEDSNLQAPTWSPSGR 402
                 W P+G LIA    S    +  V+             L  E + + +  WS    
Sbjct: 238 GTPALAWQPRGALIAAAARSECDVSDRVVFYERNGLRRGDFVLPGEGAEITSLAWSADSA 297

Query: 403 SL-IFSRKKDGDTGSKLYS 420
            L   +R +DG    ++++
Sbjct: 298 CLAAATRYRDGAHAVQIWT 316


>gi|16764149|ref|NP_459764.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167550542|ref|ZP_02344299.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|167994432|ref|ZP_02575523.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168230668|ref|ZP_02655726.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168236709|ref|ZP_02661767.1| 6-phosphogluconolactonase (6-P-gluconolactonase) [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|168263721|ref|ZP_02685694.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|194446085|ref|YP_002040021.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194470563|ref|ZP_03076547.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194736218|ref|YP_002113878.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197249028|ref|YP_002145741.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197264954|ref|ZP_03165028.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|198245773|ref|YP_002214750.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200389836|ref|ZP_03216447.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|207856223|ref|YP_002242874.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213051470|ref|ZP_03344348.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213427684|ref|ZP_03360434.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|238913345|ref|ZP_04657182.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|60389421|sp|Q8ZQR4|6PGL_SALTY RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|226706806|sp|B5F063|6PGL_SALA4 RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|226706807|sp|B5FP52|6PGL_SALDC RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|226706808|sp|B5QX56|6PGL_SALEP RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|226706811|sp|B4SZI8|6PGL_SALNS RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|226706813|sp|B4TQT0|6PGL_SALSV RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|16419291|gb|AAL19723.1| putative 3-carboxymuconate cyclase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|194404748|gb|ACF64970.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194456927|gb|EDX45766.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|194711720|gb|ACF90941.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197212731|gb|ACH50128.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197243209|gb|EDY25829.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197290087|gb|EDY29444.1| 6-phosphogluconolactonase (6-P-gluconolactonase) [Salmonella
           enterica subsp. enterica serovar Schwarzengrund str.
           SL480]
 gi|197940289|gb|ACH77622.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199602281|gb|EDZ00827.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205324500|gb|EDZ12339.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205327696|gb|EDZ14460.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205334817|gb|EDZ21581.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205347801|gb|EDZ34432.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206708026|emb|CAR32316.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261246043|emb|CBG23845.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992524|gb|ACY87409.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|312911807|dbj|BAJ35781.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321226359|gb|EFX51410.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322613866|gb|EFY10804.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322620365|gb|EFY17232.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322622791|gb|EFY19636.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322628703|gb|EFY25490.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322631641|gb|EFY28397.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322637167|gb|EFY33870.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641633|gb|EFY38269.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322648014|gb|EFY44484.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322648504|gb|EFY44956.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322654241|gb|EFY50564.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322658156|gb|EFY54423.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322663630|gb|EFY59832.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322670366|gb|EFY66506.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322671602|gb|EFY67724.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322676958|gb|EFY73025.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682883|gb|EFY78902.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322686562|gb|EFY82544.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323194541|gb|EFZ79734.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323199128|gb|EFZ84224.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323202084|gb|EFZ87143.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323208891|gb|EFZ93828.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323211629|gb|EFZ96465.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
 gi|323215272|gb|EGA00018.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323219145|gb|EGA03644.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323223943|gb|EGA08239.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323229950|gb|EGA14073.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233175|gb|EGA17271.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323240910|gb|EGA24952.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323243227|gb|EGA27247.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323246148|gb|EGA30134.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323251554|gb|EGA35423.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258814|gb|EGA42469.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323260717|gb|EGA44322.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323267847|gb|EGA51326.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323269470|gb|EGA52924.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|332987716|gb|AEF06699.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 331

 Score = 45.8 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 72/235 (30%), Gaps = 18/235 (7%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 2   KQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 61

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPD-SSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
            Y +     A         +  S +  S D   + VF  S   G   + V +        
Sbjct: 62  AYRIAPDDGALT-FAAESALPGSPTHISTDHHGRFVFVGSYNAGN--VSVTRLQDGLPVE 118

Query: 341 ISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNL 392
           +    E          +P    +       ++  +  +  DG        E   VE +  
Sbjct: 119 LVDVVEGLDGCHSANITPDNRTLWVPALKQDRICLFTLSDDGHLVAQEPAEVNTVEGAGP 178

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
           +   + P+ R   +   +   +       + +G  E   TL   PA  SD +W  
Sbjct: 179 RHMVFHPN-RQYAYCVNELNSSVDVWQLKNPHGEIECVQTLDMMPADFSDTRWAA 232


>gi|307265115|ref|ZP_07546675.1| conserved hypothetical protein [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919913|gb|EFN50127.1| conserved hypothetical protein [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 485

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 97/275 (35%), Gaps = 34/275 (12%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           R++F   +           V+  D  +N       +++ +   + SP Q K+    + D 
Sbjct: 36  RLVFSLPNSSEDFDNTLYTVLLYDSNSNKIASEFLKNKRIGYYKLSPRQDKIVVGIHYDA 95

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE----AMDIYSVDLQ 290
                Y+++     AP+R+       + P +S NG   +  +  D     +  I+S D+ 
Sbjct: 96  ASFEYYVINID-GSAPERLTLPVRDGIYPVWS-NGGEYIYGISPDSLNAKSGYIFSYDVN 153

Query: 291 SNATERLTNTLFINISASYSP--DSSQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEA 347
               E+      IN      P  D+  ++F  D     ++  +       K + S +   
Sbjct: 154 KGTFEKYPLESEINSCGKIKPYFDNKGVLFICD----NKINYLNFENKVVKPVYSFNGSV 209

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--------VEDSNLQAPTWSP 399
           +Y     S       F     +     +   DG+  +++         +  +L +  + P
Sbjct: 210 TYG----SLDKSRTIFVLNDEKN---CLDVLDGNNFKIIKTYKNILKYKFYSLDSMAF-P 261

Query: 400 SGRSLIFSRK----KDGDTGSKLYSIDLNGRNETL 430
            G  +IF       K    G+ + S+DLNG    L
Sbjct: 262 DGEHVIFKIYKYDDKGNFIGAPIVSVDLNGNVREL 296


>gi|242095116|ref|XP_002438048.1| hypothetical protein SORBIDRAFT_10g007270 [Sorghum bicolor]
 gi|241916271|gb|EER89415.1| hypothetical protein SORBIDRAFT_10g007270 [Sorghum bicolor]
          Length = 721

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 88/255 (34%), Gaps = 46/255 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM--------ILAPRFSSNG 269
            F+ ++  V ++ Y D+   R+Y     I   P  +              +  P FS   
Sbjct: 142 AFAVDKSVVVFSNYKDQ---RLYKQTIGIGAPPVPLTPDYGAPSVSYADGVFDPHFS--- 195

Query: 270 KRALISVQK-----DEAMDIYSVDLQSN---ATERLTNTLFINISASYSPDSSQIVFE-- 319
           +   +   +     +    I +VDL  +     + L +               ++ +   
Sbjct: 196 RYVTVMEDRRKDSLNPTTTIAAVDLSGSDVHEPKVLISGNDFYAFPRIDQSKKRMAWIEW 255

Query: 320 ---SDREGKEQLYV--MQSNGSDQKRISQDKEA-----SYFDPVWSPQGDLIAFTKFSGE 369
              +    K +L+V     NG   KR+           S  +P WSP+G+L   T     
Sbjct: 256 SHPNMPWDKSELWVGYFAENGDLTKRVCIAGGNPLLVESPSEPKWSPKGELFFVTDRGSG 315

Query: 370 KFAIGVMKKDGSQERLLVE-DSNLQAPTW---------SPSGRSLIFSRKKDGDTGSKLY 419
            + I    +  ++   +   D+    P W           +   ++FS ++ G   S L 
Sbjct: 316 FWNIYKWVEQTNEIVPVYSLDAEFTTPLWVFGISSYDFLGNSNHIVFSYRQQGR--SHLG 373

Query: 420 SIDLNGRNETLINTP 434
            +D +  + +L++TP
Sbjct: 374 VLDCDSASVSLLDTP 388



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 59/384 (15%), Positives = 111/384 (28%), Gaps = 49/384 (12%)

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR--K 153
           ++  +  W S     +V+G   + G   L  + RL  ++ R +  G+             
Sbjct: 65  AVAPYGSWRSPITADVVSGADRRLGGIALAGDGRLLWIEGRPEEKGRMVIVKEEDNPVDV 124

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           I    +        G  G F      V  S           +    GA    LTP     
Sbjct: 125 IPQEFAARTLAQEYG-GGAFAVDKSVVVFSNYKDQRLYKQTIGI--GAPPVPLTPDYGAP 181

Query: 214 -------LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID------RAPKRIGNFRSMI 260
                  +F+P FS   + V       +D L        +D        PK + +     
Sbjct: 182 SVSYADGVFDPHFS---RYVTVMEDRRKDSLNPTTTIAAVDLSGSDVHEPKVLISGNDFY 238

Query: 261 LAPRFSSNGKRALISVQKDEA-----MDIYS-VDLQSNATERLTNTLFIN-------ISA 307
             PR   + KR                +++     ++    +       N          
Sbjct: 239 AFPRIDQSKKRMAWIEWSHPNMPWDKSELWVGYFAENGDLTKRVCIAGGNPLLVESPSEP 298

Query: 308 SYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVW-----SPQ---- 357
            +SP      F +DR  G   +Y      ++   +    +A +  P+W     S      
Sbjct: 299 KWSPKGELF-FVTDRGSGFWNIYKWVEQTNEIVPV-YSLDAEFTTPLWVFGISSYDFLGN 356

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            + I F+     +  +GV+  D +   LL    +  +   +       +           
Sbjct: 357 SNHIVFSYRQQGRSHLGVLDCDSASVSLLDTPFSDLSDVVAADDYF--YVGGASASIPRS 414

Query: 418 LYSIDLNGRNETLINTP-AYASDP 440
           +  + LN     ++N    ++S P
Sbjct: 415 IAKVTLNESKTKVVNFSIVWSSSP 438


>gi|239632167|ref|ZP_04675198.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|239526632|gb|EEQ65633.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lactobacillus
           paracasei subsp. paracasei 8700:2]
          Length = 658

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 62/186 (33%), Gaps = 23/186 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-----VYLMDTRIDRAPKRIGNFRSM 259
            L   R+        SP+ Q +A+      D         YL++    +           
Sbjct: 173 RLVMGREHEFEVGAISPDGQTLAFTAERLPDDPNDFSQATYLLNLVDQQITMVNDQLPQA 232

Query: 260 ILAP-RFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISASYSPDS 313
            L+P  FS++GK+ L+    +   +     ++  DL +   + + + +  +I    + D 
Sbjct: 233 ALSPEAFSADGKQLLLVGSDNHLPNVSQSHLWHYDLATKTLQDVADDIDFDIPGHVNGDF 292

Query: 314 SQIVFESDRE----------GKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLI 361
            Q + E   +          G +        G   ++++          D   +P    +
Sbjct: 293 QQDLSEKVADFATADYYLTIGFDHGKTSLYAGGPDEQLTPLIGGRRHVTDYALTPDHHGV 352

Query: 362 AFTKFS 367
            FT+ +
Sbjct: 353 VFTEST 358


>gi|39974527|ref|XP_368654.1| hypothetical protein MGG_00590 [Magnaporthe oryzae 70-15]
 gi|145018507|gb|EDK02786.1| hypothetical protein MGG_00590 [Magnaporthe oryzae 70-15]
          Length = 1073

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 43/240 (17%), Positives = 76/240 (31%), Gaps = 45/240 (18%)

Query: 219 FSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGK- 270
            SP+  ++A A             +Y  D    R P+++    +    I + RFS NG+ 
Sbjct: 25  ISPDGSRLATAGGDGHVRVWSTEAIYNADNESFRKPRQLCHMSHHLGTIHSVRFSPNGRY 84

Query: 271 -------RALISVQKDEAMDIYSVDLQSNAT---------ERLTNTLFINISASYSPDSS 314
                  + +   Q D     ++    +N           +RL          ++S DSS
Sbjct: 85  LASGADDKIICIYQLDSNPPSHTATFGTNEPPPIENWKTYKRLVGHENDVQDIAWSYDSS 144

Query: 315 ---------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
                    ++V  S     E+L  +  + S  K I+ D  A+ F    S     I   +
Sbjct: 145 ILVSVGLDSKVVVWSGHT-FEKLKTLAVHQSHVKGITFD-PANKFFATASDD-RTIKIFR 201

Query: 366 FSGEKFAIGVMKKDGSQERLLV-EDSNLQAP--------TWSPSGRSLIFSRKKDGDTGS 416
           F+             +             +P        +WSP G  +  +   +G   S
Sbjct: 202 FTPPAPNATQHDMVNNFVLETTINTPFKSSPLTTYFRRCSWSPDGNHIAAANAVNGPVSS 261



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 28/243 (11%), Positives = 74/243 (30%), Gaps = 44/243 (18%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             +  + +  +S +   +     D +    V +         K +   +S +    F   
Sbjct: 129 GHENDVQDIAWSYDSSILVSVGLDSK----VVVWSGHTFEKLKTLAVHQSHVKGITFDPA 184

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERL----------TNTLFINISA--------SYS 310
            K    +   D  + I+     +    +           T       S         S+S
Sbjct: 185 NKFFA-TASDDRTIKIFRFTPPAPNATQHDMVNNFVLETTINTPFKSSPLTTYFRRCSWS 243

Query: 311 PDSSQIVFESDREGK-------------EQLYVMQSNGSDQ-----KRISQDKEASYFDP 352
           PD + I   +   G               ++ ++   G  +      R+    + +  + 
Sbjct: 244 PDGNHIAAANAVNGPVSSVAIIERGSWLSEINLIGHEGPTEVTQFSPRLFHTTDPALANG 303

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRK 409
             +   +L+     +G+   + +   + S+  ++++D   ++    +W+P G+ L     
Sbjct: 304 NSNGSSNLVTVIASAGQDKTLSIWNTNTSRPLVILQDLASKSIADLSWTPDGQVLFVCSL 363

Query: 410 KDG 412
             G
Sbjct: 364 DGG 366


>gi|71998426|ref|NP_001022469.1| Eukaryotic Initiation Factor family member (eif-3.B)
           [Caenorhabditis elegans]
 gi|75028999|sp|Q9XWI6|EIF3B_CAEEL RecName: Full=Eukaryotic translation initiation factor 3 subunit B;
           Short=eIF3b; AltName: Full=Eukaryotic translation
           initiation factor 3 subunit 9
 gi|3881103|emb|CAA21681.1| C. elegans protein Y54E2A.11a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 725

 Score = 45.4 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 80/227 (35%), Gaps = 31/227 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALIS 275
           +SP    +AY +   + +            + +R+ + R   +A     +  +GKR    
Sbjct: 364 WSPTSTVLAYYSECTDAVPA--EFGLLQVPSMQRLRSARVHNVADAQMFWQKSGKRLAFY 421

Query: 276 VQK------------------DEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI 316
             +                     +DI+ +D +  +   L  +  FI+    + P+  + 
Sbjct: 422 TMRFKKKEYRETGEVKYVGGCQYHVDIFEIDKKDVSLMNLPLSEPFIHFD--WDPEGDKF 479

Query: 317 VFESDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAI 373
                   K   Q+Y +++N    K +S+     +F+ V ++P+G  +A          +
Sbjct: 480 CVLVGNTAKATPQVYKIEANSHAPKLVSKLDAGVHFNEVQFAPKGGWLAVLAKVSAGGNV 539

Query: 374 GVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +    S+ +    +E        W P+GR  +      G  G+ L
Sbjct: 540 YFIDTSLSEAKRTNVIEHPLFNKGYWDPTGRYFVTCSTLGGRAGADL 586


>gi|325277911|ref|ZP_08143454.1| oligopeptidase B [Pseudomonas sp. TJI-51]
 gi|324096958|gb|EGB95261.1| oligopeptidase B [Pseudomonas sp. TJI-51]
          Length = 680

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 53/168 (31%), Gaps = 11/168 (6%)

Query: 262 APRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           A   S + +    S+    DE   +Y  DL S A   L      + S +++ DS  + F 
Sbjct: 129 AFSVSPDHRLLAYSLDTSGDEVYSLYVKDLASGAITALPF-EDCDGSMTWANDSQTLFFA 187

Query: 320 --SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIGVM 376
              D     +L          +R+ ++ +  +F   + +     +     S       V+
Sbjct: 188 ELDDTHRPWRLCRHTLGSPGAERVFEEPDGRFFLHCYRTSSERQLVLLLNSKTTSEAWVL 247

Query: 377 KKDGSQERLLVEDSNLQAPTWSP-----SGRSLIFSRKKDGDTGSKLY 419
             +  Q   +     ++   + P      G    F R         LY
Sbjct: 248 NAETPQAPFVCLAPRVEGHEYFPDHGQLDGAWCWFIRTNQDGINFALY 295



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 30/84 (35%), Gaps = 2/84 (2%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQA 394
           D   ++     S      SP   L+A++  +     +++ V          L  +    +
Sbjct: 115 DPNALANGGFLSLGAFSVSPDHRLLAYSLDTSGDEVYSLYVKDLASGAITALPFEDCDGS 174

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKL 418
            TW+   ++L F+   D     +L
Sbjct: 175 MTWANDSQTLFFAELDDTHRPWRL 198


>gi|322806020|emb|CBZ03587.1| internalin-like protein (LPXTG motif) Lmo0333 homolog [Clostridium
            botulinum H04402 065]
          Length = 1355

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 42/257 (16%), Positives = 93/257 (36%), Gaps = 36/257 (14%)

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
            +    +G +K +L +   +G     +  S   IL       + + + Y   +  +     
Sbjct: 1064 TVDGYTGEVKLTLRI---NGEIPYGMGNSSSNILNGGFIIKDSEYIYYINKESGNGK--- 1117

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +   +I+ A  ++ +         +   G+            +IY +    +  + +   
Sbjct: 1118 IYRNKINGAEDKLLSSNGAEFLNIY---GEYIYYVS----NGNIYRIRKDGSEEKLI--- 1167

Query: 301  LFINISASYS--PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQ 357
                 SASY    +     F+  R G   +Y ++ +G+    +    +       V S  
Sbjct: 1168 --KEASASYMTVCNDFIYYFDKSRTG---IYKVKIDGTSYSSVVYGGKWRLDSQFVIS-- 1220

Query: 358  GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            G+ I +T +  +  +I  +K DG+ +  L   +N+     S  G S+ +           
Sbjct: 1221 GEWIYYTNYEDKS-SIYKIKIDGTGKEKL---NNIPCSQMSVIGSSIYYVSN------GN 1270

Query: 418  LYSIDLNGRNETLINTP 434
            LY I ++G N +L+ + 
Sbjct: 1271 LYKISIDGSNNSLVYSG 1287


>gi|301614087|ref|XP_002936520.1| PREDICTED: acylamino-acid-releasing enzyme-like [Xenopus (Silurana)
           tropicalis]
          Length = 730

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 17/126 (13%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---------------ATYD 232
             +++L  +D  G     L+ S    +F PR SP++ ++ Y                 YD
Sbjct: 272 NRRSALFFVDLTGGKCEMLS-SDSSAVFSPRLSPDKCRIVYLKCNVYGPHQQCCQLVMYD 330

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQS 291
               +   ++DT       +     + +LAP  +S++ +R ++S  +    +++ VD  +
Sbjct: 331 WYTKVTSVVVDTVPRSIEGKFSGIYTSLLAPFCWSADSQRVILSTAQHSQENLFVVDTMT 390

Query: 292 NATERL 297
                L
Sbjct: 391 GNVTHL 396



 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 67/195 (34%), Gaps = 39/195 (20%)

Query: 282 MDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFES-----DREG-------KE 326
             +  +D++ +    L   +  +IS     +SPD + +VF        R G       + 
Sbjct: 217 PALCVLDIEGSNISVL-EGIPDHISPGQAFWSPDDTGVVFVGWWHSPFRVGLKYCANRRS 275

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKF----AIGVMKKDGS 381
            L+ +   G   + +S D  A  F P  SP    I + K            + +      
Sbjct: 276 ALFFVDLTGGKCEMLSSDSSA-VFSPRLSPDKCRIVYLKCNVYGPHQQCCQLVMYDWYTK 334

Query: 382 QERLLVED-------------SNLQAP-TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
              ++V+              ++L AP  WS   + +I S  +       L+ +D    N
Sbjct: 335 VTSVVVDTVPRSIEGKFSGIYTSLLAPFCWSADSQRVILSTAQHSQ--ENLFVVDTMTGN 392

Query: 428 ETLINTPAYASDPQW 442
            T + +   +S   W
Sbjct: 393 VTHLFSK-ESSPGSW 406


>gi|296483763|gb|DAA25878.1| THO complex subunit 3 [Bos taurus]
          Length = 292

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 35/242 (14%), Positives = 83/242 (34%), Gaps = 15/242 (6%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           SV SG  +  L + +   G +     P+    +    +S + +++A  ++D      V+L
Sbjct: 26  SVSSGPTRYVLGMQELFRGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFD--KTASVFL 83

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++                +    +  +     ++   D+ + I+  D+++       NT 
Sbjct: 84  LEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIW--DVRTTKCIATVNTK 141

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
             NI+  +SPD   I       G +   V   +    +  ++++     +   W+   ++
Sbjct: 142 GENINICWSPDGQTIAV-----GNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNM 196

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             F         I    +    + +    SN     + P G+   +      D    L+ 
Sbjct: 197 F-FLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGK---YFATGSADALVSLWD 252

Query: 421 ID 422
           +D
Sbjct: 253 VD 254



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 74/214 (34%), Gaps = 23/214 (10%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R    S DQ+ + P  +P+     + T   +  +R++  D R  +    + N +   +
Sbjct: 94  NYRGHGDSVDQLCWHPS-NPD----LFVTASGDKTIRIW--DVRTTKCIATV-NTKGENI 145

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +G+   +  + D    I +   +S A E+     F     S++ D++       
Sbjct: 146 NICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ---FKFEVNEISWNNDNNMFFLT-- 200

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G   + ++        +      ++     + P G   A          + +   D  
Sbjct: 201 -NGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADA---LVSLWDVD-- 254

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKD 411
           +   +   S L  P    ++S  G+ L  + +  
Sbjct: 255 ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDH 288


>gi|218549768|ref|YP_002383559.1| hypothetical protein EFER_2447 [Escherichia fergusonii ATCC 35469]
 gi|218357309|emb|CAQ89944.1| conserved hypothetical protein; putative membrane protein
           [Escherichia fergusonii ATCC 35469]
          Length = 645

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 82/257 (31%), Gaps = 32/257 (12%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T            S +  K          +  +      ++ D  +++   
Sbjct: 402 ATGEIIQSITTGAHPDSLI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 459

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS- 310
              + +        S + K  L+        +I  ++  ++  E   +    +     S 
Sbjct: 460 TGTSGKPGAWVMALSPDEKTLLVPGA--GRGNIVRINTITHQKE---DFPAGDARGVVSA 514

Query: 311 ----PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
               P + +++F  D +G  ++       S   +      + Y     SP G  +A   +
Sbjct: 515 MGFRPKNGEVIFA-DSQGISRISTGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSY 571

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             + + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D    
Sbjct: 572 GLQGYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT-- 622

Query: 427 NETLINTPAYASDPQWV 443
               ++  A    PQ+ 
Sbjct: 623 --RSLDPQAIIRHPQYG 637


>gi|195580523|ref|XP_002080085.1| GD21673 [Drosophila simulans]
 gi|194192094|gb|EDX05670.1| GD21673 [Drosophila simulans]
          Length = 775

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/228 (14%), Positives = 77/228 (33%), Gaps = 36/228 (15%)

Query: 192 SLCVMDRDG--------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           +L +   DG        A +     +    +   R+SP+   +   T  ++ +++++   
Sbjct: 94  TLLICSNDGRFVILNKSARVERSISAHAAAISSGRWSPDGAGLL--TAGEDGVIKIW--- 148

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           +R       +      I   R++ N    +    +   + I  +   S    R      +
Sbjct: 149 SRSGMLRSTVVQNEESIRCARWAPNSTSIVFC--QGGHISIKPLAANSK-LIRWRAHDGL 205

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +S S+S  S+ I          +  +  + G++    S  +E +     ++P+ D +  
Sbjct: 206 VLSLSWSTQSNVIA---SGGEDFRFKIWDAQGANLF-TSAAEEYAITSVAFNPEKDYLLV 261

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRS 403
             F+     + +   +G         +   +P        +WSP G  
Sbjct: 262 GTFN----LLKLCHSNGWSY----NTARFSSPRVGSLFNLSWSPDGTQ 301



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 72/214 (33%), Gaps = 16/214 (7%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLT 207
              R +    S  + +SI+      +S       + + +      + +  R G  +R   
Sbjct: 100 NDGRFVILNKSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM-LRSTV 158

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              ++ +   R++PN   + +          + +     +    R      ++L+  +S+
Sbjct: 159 VQNEESIRCARWAPNSTSIVFC-----QGGHISIKPLAANSKLIRWRAHDGLVLSLSWST 213

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                  S  +D    I+  D Q           +   S +++P+   ++          
Sbjct: 214 QSNVIA-SGGEDFRFKIW--DAQGANLFTSAAEEYAITSVAFNPEKDYLL----VGTFNL 266

Query: 328 LYVMQSNG--SDQKRISQDKEASYFDPVWSPQGD 359
           L +  SNG   +  R S  +  S F+  WSP G 
Sbjct: 267 LKLCHSNGWSYNTARFSSPRVGSLFNLSWSPDGT 300


>gi|167380705|ref|XP_001733294.1| hypothetical protein [Entamoeba dispar SAW760]
 gi|165902598|gb|EDR28377.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
          Length = 675

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/109 (14%), Positives = 41/109 (37%), Gaps = 9/109 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+SP   ++       G   ++ +       K + ++ + +     W P G  IA    +
Sbjct: 128 SWSPKGERLA-VVTLNGNVIIWTLFDEAHTTKTLDKNHQYAQGV-SWDPLGQYIAIQHSN 185

Query: 368 GEKFAIGVMKK--DGSQERLLVED--SNLQAPTWSPSGRSLI-FSRKKD 411
              F +  +       +  +   D   + + P+WS  G  ++ ++  ++
Sbjct: 186 --NFELWKVNPYQKIKEFPIKTSDVLKHWRRPSWSDDGSMVVGYNTSRN 232



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 43/110 (39%), Gaps = 5/110 (4%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
           +F S ++   +S  G+R  + V  +  + I+++  +++ T+ L          S+ P   
Sbjct: 119 DFGSEVIDISWSPKGERLAV-VTLNGNVIIWTLFDEAHTTKTLDKNHQYAQGVSWDPLGQ 177

Query: 315 QIVFESDREGKEQLYVMQSNG--SDQKRISQDKEASYFDPVWSPQGDLIA 362
            I  +       +L+ +       +    + D    +  P WS  G ++ 
Sbjct: 178 YIAIQ--HSNNFELWKVNPYQKIKEFPIKTSDVLKHWRRPSWSDDGSMVV 225


>gi|148222751|ref|NP_001090257.1| WD repeat and SOCS box containing 2 [Xenopus laevis]
 gi|52139147|gb|AAH82668.1| Wsb2 protein [Xenopus laevis]
          Length = 409

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 67/200 (33%), Gaps = 23/200 (11%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V + D         +   + ++    FS+N    L++  +D+ + ++ +         L+
Sbjct: 137 VKVWDVHTGGLLFNLAGHQDVVRDVSFSTNDSLILVTASRDKTLRVWDLKKDGKLLHVLS 196

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                    + SPD S +       G+  + +         R  +  + S     +SP  
Sbjct: 197 GHTNWVYCCAISPDCSMLC---SAAGENSVLLWSMRSYTLIRKLEGHQNSVVSCDFSPDS 253

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERL-------------LVED--SNLQAPTWSPSGRS 403
            L+    +      I      G + R                E   S+L++  +SP G  
Sbjct: 254 ALLVTASYDTT--VIMWDPYTGERLREFLHVSLPPDVEYSTTEPQLSSLRSVCFSPEG-- 309

Query: 404 LIFSRKKDGDTGSKLYSIDL 423
            +F      D   +L+S++L
Sbjct: 310 -LFLASLADDRFLRLWSLEL 328



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 28/234 (11%), Positives = 70/234 (29%), Gaps = 45/234 (19%)

Query: 218 RFSPNQQKVAYATYD--------------------DEDILRVYLMDTRIDRAPKRIGN-- 255
            FSP+ +  A++                             V + D +  ++P+      
Sbjct: 31  AFSPDGRWFAWSQGHGIVKLLPWPIEEDHLRPQSFASKNQCVKITDIKGRQSPEEKTLDC 90

Query: 256 ---FRSMILAPRFSSNGKRA-----------------LISVQKDEAMDIYSVDLQSNATE 295
                 +      S  G++                  L +   D  + ++ V        
Sbjct: 91  GQIVWGLSFGSSSSPLGRKLWPCSRHQAAGSSGSWLVLATGLNDGHVKVWDV-HTGGLLF 149

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L     +    S+S + S I+  + R+   +++ ++ +G     +S      Y     S
Sbjct: 150 NLAGHQDVVRDVSFSTNDSLILVTASRDKTLRVWDLKKDGKLLHVLSGHTNWVY-CCAIS 208

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           P   ++  +        +  M+      +L    +++ +  +SP    L+ +  
Sbjct: 209 PDCSMLC-SAAGENSVLLWSMRSYTLIRKLEGHQNSVVSCDFSPDSALLVTASY 261


>gi|330846189|ref|XP_003294930.1| hypothetical protein DICPUDRAFT_160021 [Dictyostelium purpureum]
 gi|325074503|gb|EGC28544.1| hypothetical protein DICPUDRAFT_160021 [Dictyostelium purpureum]
          Length = 596

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 40/234 (17%), Positives = 72/234 (30%), Gaps = 40/234 (17%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             S      L   +  G +   LT    ++     F+PN  +V   ++D      + L D
Sbjct: 367 GTSNDNSARLWSTEL-GRSRHTLTGHIGKVYTGKFFNPN--RVVTGSHDR----TIKLWD 419

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRAL---------ISVQKDEAMDIYSVDLQSNAT 294
            +     + I  F S          G   +                        +     
Sbjct: 420 LQKGYCTRTIFCFSSCNDLAILGGTGNHLVSGHVDHSVRFWDSNIGEPTHVLSSIHEGQI 479

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA----SYF 350
             +TN          SP +S  +  + R+    L ++ +   +  R  +D+E     ++ 
Sbjct: 480 TSITN----------SPVNSHHILTNSRDHT--LKIIDTRTFETIRTFKDQEYRNGLNWT 527

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLV----EDSNLQAPTWSP 399
              WSP G  IA     G    I +    +G   ++L       S++    WSP
Sbjct: 528 KAAWSPDGAYIASGSIDGS---ICIWDANNGKTIKVLTKVHNNGSSVCCCAWSP 578


>gi|330928690|ref|XP_003302365.1| hypothetical protein PTT_14142 [Pyrenophora teres f. teres 0-1]
 gi|311322329|gb|EFQ89530.1| hypothetical protein PTT_14142 [Pyrenophora teres f. teres 0-1]
          Length = 511

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 45/316 (14%), Positives = 79/316 (25%), Gaps = 70/316 (22%)

Query: 111 LVTGRVIKEGK----DRLRVEFRLWDVKDRKQII----GKKFFSSPASWR---------- 152
           ++      +G          E R+WD    KQI     G   F +  SW           
Sbjct: 187 VLAVSYSPDGSLLASGGYDNEVRIWDPNTGKQIGSALKGHTQFITSLSWEPYHLQEAGRP 246

Query: 153 -----------KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
                      ++   I   I  +++G KG         +  + +     ++ V D    
Sbjct: 247 RVASSSKDGTVRVWDAIGGRIDYALSGHKGSVTCVKWGGTGRIYTSSHDKTIKVWDAATG 306

Query: 202 NIRYLTPSRDQILFEPRFSPN------------------QQKVAYATYDDEDILR----- 238
            +          +     S +                  ++K+A A    E         
Sbjct: 307 TLVNTLSGHAHWVNHLALSTDFVLRTSYHDHTRKVPSSPEEKLAKAKARFEKAATTNGEV 366

Query: 239 -------------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                        +        +   R+   +  I    FS +G     S   D  + ++
Sbjct: 367 VERLATASEDCTIILWTPLTSTKPVTRMTGHQKQINQVTFSPDGALLA-SAAWDNHVKLW 425

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           S          L   +       +S DS  +   S       L V        K      
Sbjct: 426 SA-RDGKFLNTLRAHVGPVYMTCFSADSRLLASCSK---DTTLKVWDMRTGKLKEDLPGH 481

Query: 346 EASYFDPVWSPQGDLI 361
           +   F   WSP G  +
Sbjct: 482 KDQVFALDWSPDGGRV 497



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 23/182 (12%), Positives = 57/182 (31%), Gaps = 13/182 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + SG    ++ + D D     +      + +    +SP+   +A   YD+E  +R++
Sbjct: 154 SSRMASGSGDKTVRIWDCDTGTPVHTLKGHSRWVLAVSYSPDGSLLASGGYDNE--VRIW 211

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSNATE 295
             +T         G+ +  I +  +        G+  + S  KD  + ++   +      
Sbjct: 212 DPNTGKQIGSALKGHTQ-FITSLSWEPYHLQEAGRPRVASSSKDGTVRVWDA-IGGRIDY 269

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L+          +    +  ++ S  +  + + V  +                     S
Sbjct: 270 ALSGHKGSVTCVKWG--GTGRIYTSSHD--KTIKVWDAATGTLVNTLSGHAHWVNHLALS 325

Query: 356 PQ 357
             
Sbjct: 326 TD 327


>gi|302763973|ref|XP_002965408.1| hypothetical protein SELMODRAFT_439216 [Selaginella moellendorffii]
 gi|300167641|gb|EFJ34246.1| hypothetical protein SELMODRAFT_439216 [Selaginella moellendorffii]
          Length = 762

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 33/249 (13%)

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
               RL+D      +  K  +S+    R     I              F      V  S 
Sbjct: 528 DASIRLYDTASATPM--KTLYSA----RYGVDHIC-------------FTHHTNAVIFSS 568

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +G  ++   ++  D   +RY      ++      + +QQ + +A   +   ++++   +
Sbjct: 569 SNGSDESLRYLLLYDNRFLRYFRGHTQRVRGRLSVAYDQQGLVFAVCMEGGAIKLFDGRS 628

Query: 245 RIDRA--PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTL 301
                     +G     +   +FS++GK  L+S        +Y +D          T   
Sbjct: 629 FDKGPFDTFLVGGDTVEVAGMKFSNDGKMMLLSTT---NSRVYLLDAYSGKKMHGFTLKP 685

Query: 302 FINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             +     AS+SPD   ++  S   G   L +  S  + +     +         W+P  
Sbjct: 686 SRDGETLEASFSPDGRYVISGS---GDGSLRIWSSLSNAEVACWTNNAGIPAVVKWAP-- 740

Query: 359 DLIAFTKFS 367
             + F   S
Sbjct: 741 RRLMFATAS 749


>gi|265752802|ref|ZP_06088371.1| dipeptidyl peptidase IV [Bacteroides sp. 3_1_33FAA]
 gi|263235988|gb|EEZ21483.1| dipeptidyl peptidase IV [Bacteroides sp. 3_1_33FAA]
          Length = 737

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 95/319 (29%), Gaps = 79/319 (24%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPR------------FSPNQQKVAYATYDDED 235
            + N+L V   DG   +     +  +  +              +SP    +A+   D+  
Sbjct: 153 TLDNNLFVTTADGKTQQVTDEPKGIVCGQSVHRQEFGISKGTFWSPKGNLLAFYRMDESM 212

Query: 236 ILRVYLMDTRIDRAPKRIGNFR--SMILA--------PR--------------------- 264
           +     ++T    A      +    M           P                      
Sbjct: 213 VTDYPQVNTSTRIATLEPDKYPMAGMTSHKVTVGIYNPATQKTVYLKAGDPTDRYFTNIS 272

Query: 265 FSSNGKRA-LISVQKDEAMDI-YSVDLQSNATERLTNTLFINISAS----------YSP- 311
           +S + K   +I + +D+   +    D ++     L N        +          + P 
Sbjct: 273 WSPDEKSVYVIELNRDQNHALLCCYDAETGEP--LKNNPLYEEEHTKYVEPQHPIVFLPW 330

Query: 312 DSSQIVFESDREGKEQLYVMQSNGS------------------DQKRISQDKEASYFDPV 353
           D ++ +++S R+G   LY+M +  S                    ++++Q          
Sbjct: 331 DHTKFIYQSQRDGYNHLYLMDTKTSIYPESHGAAAGGSYRESYKTRQLTQGNWVVQNILG 390

Query: 354 WSPQGD--LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           ++ +    +I  T+ S  +     +     + RL+     +     S SG  +I      
Sbjct: 391 FNEKTKEVIIMSTEVSPLQSNAYAVNVKTGKRRLIGNKDGMHHVQLSGSGNYVI-DNYTS 449

Query: 412 GDTGSKLYSIDLNGRNETL 430
                 +  +  +G+ +T+
Sbjct: 450 FTIPRNIEIVPTSGKEKTV 468


>gi|240851049|ref|YP_002972449.1| WD-repeat family protein [Bartonella grahamii as4aup]
 gi|240268172|gb|ACS51760.1| WD-repeat family protein [Bartonella grahamii as4aup]
          Length = 323

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 81/222 (36%), Gaps = 28/222 (12%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
             K A+ +        V       +  P+     + +I +  FS +   A+I+  +D  +
Sbjct: 20  GNKPAFVS--------VEGFIVLFNPTPQIFEVHKGIISS-HFSHD-NTAIITGGEDGKV 69

Query: 283 DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
              +    +    +       N+  ++ P      F S R      +     G +++ ++
Sbjct: 70  CQTTAAGHTEVLSQKERKWINNV--AFGP-QKAFAFSSSR------FAFVHVGKERQELT 120

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
              E S     ++P+G  +A   ++G    +  +    S   L+ + ++    T+SP  R
Sbjct: 121 H--ERSVEGLAFAPKGLRLAVAHYNG--VTLHWLSTQISPTTLVWKGAHCGV-TFSPDNR 175

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            +I + +++   G +L     + R+  +   P+      W  
Sbjct: 176 YVISTMQENALHGWRL----TDNRHLRMSGYPSKVKSWSWSA 213



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/151 (10%), Positives = 49/151 (32%), Gaps = 16/151 (10%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G +   +        ++         + LT+   +    +++P   ++   +   G    
Sbjct: 95  GPQKAFAFSSSRFAFVHV----GKERQELTHERSVE-GLAFAPKGLRLA-VAHYNGVTLH 148

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           ++     +     +   + ++    +SP    +  T          +   D    R+   
Sbjct: 149 WL----STQISPTTLVWKGAHCGVTFSPDNRYVISTMQENALHGWRL--TDNRHLRMSGY 202

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            S +++ +WS  G+ L       G + + ++
Sbjct: 203 PSKVKSWSWSAKGKWLA----TSGASAAIIW 229


>gi|238592649|ref|XP_002392969.1| hypothetical protein MPER_07384 [Moniliophthora perniciosa FA553]
 gi|215459752|gb|EEB93899.1| hypothetical protein MPER_07384 [Moniliophthora perniciosa FA553]
          Length = 290

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/151 (15%), Positives = 52/151 (34%), Gaps = 11/151 (7%)

Query: 219 FSPNQQKVAYATYDD--EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           FSP+ + +A    D          + D +  R        +  I +  FS++G R ++S 
Sbjct: 143 FSPDGKFLATGAEDKQISTNRAHQIWDIQKKRIRSIFDGHQQEIYSLDFSADG-RLIVSG 201

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFESDREGKEQLYVM 331
             D+   I+ +   ++    + +   +N      S + SP+   +   S       + + 
Sbjct: 202 SGDKTARIWDMVDGTSKVLNINDPDSVNNDAGVTSVAISPNGLYVAAGSL---DTVVQIW 258

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                      +    S +   ++P G  + 
Sbjct: 259 DVTTGQLVERLRGHRDSVYSVAFTPDGKGLV 289



 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/218 (15%), Positives = 68/218 (31%), Gaps = 27/218 (12%)

Query: 112 VTGRVIKEGKDRLRVEF-----RLWDVKDRKQIIGKKFFSSPASWRKIAHTISD-DIYQS 165
           V   V                 +++D K   +  G+            A    D  I   
Sbjct: 87  VVCCVRFSADGNFLATGCNRTAQIYDTKTGIKTCGRSVLVDEG-----AGKAGDLYIRSV 141

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
                G F +      +  +S    + +  + +    IR +     Q ++   FS + + 
Sbjct: 142 CFSPDGKFLATGA--EDKQISTNRAHQIWDIQK--KRIRSIFDGHQQEIYSLDFSADGRL 197

Query: 226 VAYATYDDEDILRVYLMDTRIDR-----APKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           +   + D     R++ M     +      P  + N    + +   S NG     +   D 
Sbjct: 198 IVSGSGD--KTARIWDMVDGTSKVLNINDPDSVNNDAG-VTSVAISPNGLYVA-AGSLDT 253

Query: 281 AMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIV 317
            + I+  D+ +    ERL        S +++PD   +V
Sbjct: 254 VVQIW--DVTTGQLVERLRGHRDSVYSVAFTPDGKGLV 289



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/189 (12%), Positives = 56/189 (29%), Gaps = 17/189 (8%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF------INISASY 309
             S++   RFS++G        +   +      +++     L +            S  +
Sbjct: 84  HESVVCCVRFSADGNFLATGCNRTAQIYDTKTGIKTCGRSVLVDEGAGKAGDLYIRSVCF 143

Query: 310 SPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           SPD   +   ++           +        + I    +   +   +S  G LI     
Sbjct: 144 SPDGKFLATGAEDKQISTNRAHQIWDIQKKRIRSIFDGHQQEIYSLDFSADGRLIVSGSG 203

Query: 367 SGEKFAIGVMKKDGSQERL-----LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   ++        +     +  D+ + +   SP+G   ++      DT  +++ +
Sbjct: 204 DKTARIWDMVDGTSKVLNINDPDSVNNDAGVTSVAISPNG---LYVAAGSLDTVVQIWDV 260

Query: 422 DLNGRNETL 430
                 E L
Sbjct: 261 TTGQLVERL 269


>gi|212692406|ref|ZP_03300534.1| hypothetical protein BACDOR_01902 [Bacteroides dorei DSM 17855]
 gi|237711398|ref|ZP_04541879.1| dipeptidyl peptidase IV [Bacteroides sp. 9_1_42FAA]
 gi|212664985|gb|EEB25557.1| hypothetical protein BACDOR_01902 [Bacteroides dorei DSM 17855]
 gi|229454093|gb|EEO59814.1| dipeptidyl peptidase IV [Bacteroides sp. 9_1_42FAA]
          Length = 737

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 41/319 (12%), Positives = 95/319 (29%), Gaps = 79/319 (24%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPR------------FSPNQQKVAYATYDDED 235
            + N+L V   DG   +     +  +  +              +SP    +A+   D+  
Sbjct: 153 TLDNNLFVTTADGKTQQVTDEPKGIVCGQSVHRQEFGISKGTFWSPKGNLLAFYRMDESM 212

Query: 236 ILRVYLMDTRIDRAPKRIGNFR--SMILA--------PR--------------------- 264
           +     ++T    A      +    M           P                      
Sbjct: 213 VTDYPQVNTSTRIATLEPDKYPMAGMTSHKVTVGIYNPATQKTVYLKAGDPTDRYFTNIS 272

Query: 265 FSSNGKRA-LISVQKDEAMDI-YSVDLQSNATERLTNTLFINISAS----------YSP- 311
           +S + K   +I + +D+   +    D ++     L N        +          + P 
Sbjct: 273 WSPDEKSVYVIELNRDQNHALLCCYDAETGEP--LKNNPLYEEEHTKYVEPQHPIVFLPW 330

Query: 312 DSSQIVFESDREGKEQLYVMQSNGS------------------DQKRISQDKEASYFDPV 353
           D ++ +++S R+G   LY+M +  S                    ++++Q          
Sbjct: 331 DHTKFIYQSQRDGYNHLYLMDTKTSIYPESHGAAAEGSYRESYKTRQLTQGNWVVQNILG 390

Query: 354 WSPQGD--LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           ++ +    +I  T+ S  +     +     + RL+     +     S SG  +I      
Sbjct: 391 FNEKTKEVIIMSTEVSPLQSNAYAVNVKTGKRRLIGNKDGMHHVQLSGSGNYVI-DNYTS 449

Query: 412 GDTGSKLYSIDLNGRNETL 430
                 +  +  +G+ +T+
Sbjct: 450 FTIPRNIEIVPTSGKEKTV 468


>gi|86741942|ref|YP_482342.1| WD-40 repeat-containing serine/threonin protein kinase [Frankia sp.
           CcI3]
 gi|86568804|gb|ABD12613.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           CcI3]
          Length = 828

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 35/229 (15%), Positives = 76/229 (33%), Gaps = 18/229 (7%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G           + +   RFSPN + +   + D      V L D     A + +      
Sbjct: 486 GGVEINTLVGHTERVIGVRFSPNGRMLVTGSDDS----TVRLWDISNPMATRPLAVIPGD 541

Query: 260 ILA---PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                   FS++G R L +   D  + ++ + +       L     +N S +++     +
Sbjct: 542 SGTFLQGGFSADG-RLLSTSTDDHIVRLWDISVPER-PRSLAVLRDVNNSVAFAVGGKTM 599

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGV 375
              +  +   +L+ +      +   +      + +   +SP G ++A T        +  
Sbjct: 600 A-TAGTDNTAKLWDITDPHQPRLAATLVGHTDWVNTVAFSPDGRMLA-TGSHDRTIRLWD 657

Query: 376 MKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSI 421
           +        L + + +  A     + P GR L        D  ++L+ I
Sbjct: 658 VSTPTRPTPLAILNGHENAVLGLAFRPDGRIL---GSTSADRSARLWDI 703



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 65/214 (30%), Gaps = 12/214 (5%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           AY     E+  R  + +         +G+    ++  RFS NG+  + +   D  + ++ 
Sbjct: 468 AYRVEPTEEAQRSLIENFGGVEINTLVGHTER-VIGVRFSPNGRMLV-TGSDDSTVRLWD 525

Query: 287 V--DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           +   + +     +       +   +S D   +   S       + +   +  ++ R    
Sbjct: 526 ISNPMATRPLAVIPGDSGTFLQGGFSADGRLL---STSTDDHIVRLWDISVPERPRSLAV 582

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR 402
                    ++  G  +A          + I    +      L+     +    +SP GR
Sbjct: 583 LRDVNNSVAFAVGGKTMATAGTDNTAKLWDITDPHQPRLAATLVGHTDWVNTVAFSPDGR 642

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            L        D   +L+ +    R   L     +
Sbjct: 643 MLATGSH---DRTIRLWDVSTPTRPTPLAILNGH 673



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 44/301 (14%), Positives = 89/301 (29%), Gaps = 42/301 (13%)

Query: 110 VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
            ++ G      +     + RL        I+     S P   R +A              
Sbjct: 536 AVIPGDSGTFLQGGFSADGRLLSTSTDDHIVRLWDISVPERPRSLA-------VLRDVNN 588

Query: 170 KGDFNSRILFVSESVVSGIIKNSLC-VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              F      ++ +      K  L  + D     +          +    FSP+ + +A 
Sbjct: 589 SVAFAVGGKTMATAGTDNTAK--LWDITDPHQPRLAATLVGHTDWVNTVAFSPDGRMLAT 646

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGN-FRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            ++D    +R++ + T     P  I N   + +L   F  +G R L S   D +  ++ +
Sbjct: 647 GSHD--RTIRLWDVSTPTRPTPLAILNGHENAVLGLAFRPDG-RILGSTSADRSARLWDI 703

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ---- 343
              +      T T   +         S + F  D      L++M +      R+      
Sbjct: 704 ATPTEPKMLYTFTDRSDWV-------SSVAFRVD------LHLMGTTARKAARLWDISDP 750

Query: 344 ----------DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                        A+     +SP G  +A T        +  +      +R   + + + 
Sbjct: 751 RNPRPVGGLLGHTATVRRVQFSPDGT-LAATSGDDNTARLWDIDPAHIAKRACTDPTAVM 809

Query: 394 A 394
           +
Sbjct: 810 S 810


>gi|118399929|ref|XP_001032288.1| hypothetical protein TTHERM_00648940 [Tetrahymena thermophila]
 gi|89286628|gb|EAR84625.1| hypothetical protein TTHERM_00648940 [Tetrahymena thermophila SB210]
          Length = 2450

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 84/229 (36%), Gaps = 42/229 (18%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             FSPN + +     D      + + D ++      I      +++  FS + K  L++ +
Sbjct: 1763 SFSPNGRYLVTGNEDQ----NIKIWDVQLGYKLINIVQISDEVISIAFSPDSKTLLVACK 1818

Query: 278  KDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFE------------SD--- 321
            +++   +++V+      + +   +  I   A++S D   + F             SD   
Sbjct: 1819 QNQRAYLWNVEKGFQFIKEIMLESQQIET-ANFSSDGKYLAFAFANNTFQIRNVLSDYQI 1877

Query: 322  ---------REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                      +  ++LYVM+     Q ++           V+S     +A          
Sbjct: 1878 IKEINEYKQEQSNQKLYVMEMESKSQPQL---------PAVFSIDSKCLAIVTNKKICRL 1928

Query: 373  IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            + V K   S + +      + +  +S +G+ +  S K   DT  K++++
Sbjct: 1929 LDVQKNFQSFKSIEGHTDQITSIAYSKNGKYMATSSK---DTTCKIWNV 1974


>gi|47210937|emb|CAF92736.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 630

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 38/247 (15%), Positives = 78/247 (31%), Gaps = 22/247 (8%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            + + D  +   +           R+SP    +A           + L      +  +R 
Sbjct: 178 AIFNNDSKDAITVEERARWTETYVRWSPKGTYLATFHQRG-----IALWGGEKFKQIQRF 232

Query: 254 GN--FRSMILAP--RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            +     +  +P  R+S +GK    +    + + IY         ++      I    S+
Sbjct: 233 SHQGVSLIDFSPCERWSHDGK--FFARMSADTLSIYETPSMGLLEKKSLKISGIKDF-SW 289

Query: 310 SPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF---- 363
           SP  + I F    D++   ++ +MQ     + R+            W   GD +      
Sbjct: 290 SPGDNIIAFWVPEDKDIPARVTLMQLPSRQEIRVRNLFNVVDCKLHWQRNGDYLCVKVDR 349

Query: 364 ----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
               T+     F I  M++      ++    ++ A  W P+G        +        Y
Sbjct: 350 TPKGTQGVVTNFEIFRMREKQVPVDVVEMKESIIAFAWEPNGSKFAVLHGESPRISVSFY 409

Query: 420 SIDLNGR 426
            +  NG+
Sbjct: 410 HVKNNGK 416



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 80/256 (31%), Gaps = 21/256 (8%)

Query: 203 IRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            R+       I F P  R+S + +  A  + D   I     M     ++ K  G     I
Sbjct: 230 QRFSHQGVSLIDFSPCERWSHDGKFFARMSADTLSIYETPSMGLLEKKSLKISG-----I 284

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTN-TLFINISASYSPDSSQIV 317
               +S         V +D+ +      + L S    R+ N    ++    +  +   + 
Sbjct: 285 KDFSWSPGDNIIAFWVPEDKDIPARVTLMQLPSRQEIRVRNLFNVVDCKLHWQRNGDYLC 344

Query: 318 FESDRE--GKEQLY----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            + DR   G + +     + +           + + S     W P G   A       + 
Sbjct: 345 VKVDRTPKGTQGVVTNFEIFRMREKQVPVDVVEMKESIIAFAWEPNGSKFAVLHGESPRI 404

Query: 372 AIGVMKKDGSQERLL---VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           ++       + +  L    +     +  WSP G+ L+ +  +       L  +D +    
Sbjct: 405 SVSFYHVKNNGKIDLLKMFDKQQANSIFWSPQGQFLVLAGLRS--MNGALAFVDTSDCTM 462

Query: 429 TLINTPAYASDPQWVG 444
             I     ASD +W  
Sbjct: 463 MNIAEHYMASDVEWDP 478


>gi|83858668|ref|ZP_00952190.1| prolyl oligopeptidase family protein [Oceanicaulis alexandrii
           HTCC2633]
 gi|83853491|gb|EAP91343.1| prolyl oligopeptidase family protein [Oceanicaulis alexandrii
           HTCC2633]
          Length = 646

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 84/224 (37%), Gaps = 35/224 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  + A+ T++ E+   V +MD       +   +F +M     F ++    + +  
Sbjct: 44  SISPDGSRFAFVTHEGEERY-VVVMDLETG--VQEAADFSTMRAYSTFWTDEDTLIATAG 100

Query: 278 KDEAMDIY----------SVDLQSNATERLTNTLFINISASYSPDSSQIV---------F 318
           +   + I           +++  +   E+L      ++  ++  D++ +          F
Sbjct: 101 RTRELGIVSGDVNFQAFVTINADTMEAEQLIR-EGRDLGYNF--DTASLAGEDPETGRLF 157

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW--SPQGDLIAFTKFSG--EKFAIG 374
              R+ +  L +   +  + +R+S           W  SP G       F+    ++ I 
Sbjct: 158 MPLRDTRGALNLYSVDPENGRRMSLVARGDETTRGWISSPDGRSFVRLSFNNSLNQYQIA 217

Query: 375 VMKKDGSQERLLVEDS----NLQAPTWSPSGRSLIFSRKKDGDT 414
           + + D  Q R+L E      ++    ++  G++L+  R  DG  
Sbjct: 218 IEEND--QWRILYEARQNLIDMSVAGFTADGQALLVRRYTDGPG 259


>gi|332296047|ref|YP_004437970.1| WD40 repeat-containing protein [Thermodesulfobium narugense DSM
           14796]
 gi|332179150|gb|AEE14839.1| WD40 repeat-containing protein [Thermodesulfobium narugense DSM
           14796]
          Length = 922

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 59/178 (33%), Gaps = 18/178 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N+      R   +F   FSP+   + +A+        + L +   ++    +      I
Sbjct: 31  GNLIDKLRKRKDWIFITAFSPDG--IHFASGGFNS--NILLWNIFKEKPLDSLSGHEDWI 86

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIV 317
           +A  FS +GK  L S  +D  + ++SV       + +T          S ++SPD S I 
Sbjct: 87  IALAFSHDGKYLL-SGSRDNNIILWSV----QERKLITKFEGHQNRISSLAFSPDDSLIA 141

Query: 318 FESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                     + +   +     K I             S    LIA   F+     I 
Sbjct: 142 ---SGGYDSTIKIWALDSKKPIKTIDTSPLWPTSICFASKNLKLIA--GFNDGTIIIY 194


>gi|322707589|gb|EFY99167.1| dipeptidyl peptidase IV, putative [Metarhizium anisopliae ARSEF 23]
          Length = 647

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 48/121 (39%), Gaps = 15/121 (12%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-------EKFAIGVMKK 378
             +  +    S  +R+    +  Y+ P +SP G  +++ ++          K  +G    
Sbjct: 148 NYIVAINVETSAVQRVVSGAD-FYYLPQFSPDGARVSWVEWDHPNLPFAAGKLYVGDWTA 206

Query: 379 DGS-QERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            GS Q   L+   N ++   P W P G SL + ++       KLY I   GR E LI   
Sbjct: 207 QGSIQNARLIAGQNHESVAEPRWGPDG-SLFYGKETGSHR--KLYRIPPGGRPEELIQLA 263

Query: 435 A 435
            
Sbjct: 264 G 264



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 65/186 (34%), Gaps = 23/186 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL----RVYLMD 243
            ++N +  ++ + + ++ +    D   + P+FSP+  +V++  +D  ++     ++Y+ D
Sbjct: 145 KVQNYIVAINVETSAVQRVVSGAD-FYYLPQFSPDGARVSWVEWDHPNLPFAAGKLYVGD 203

Query: 244 TRIDRAPKRIGNFRSMI----LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                + +               PR+  +G       +      +Y +       E L  
Sbjct: 204 WTAQGSIQNARLIAGQNHESVAEPRWGPDG-SLFYGKETGSHRKLYRIPP-GGRPEELIQ 261

Query: 300 TLFINI-----------SASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
              ++            S ++ P  +  +V  +   G  +L  +       K ++ + E 
Sbjct: 262 LAGLDDAEFAQAGLMEGSRTFVPLTADLLVATAYINGTSRLIAIDMTTGSWKPLADENEL 321

Query: 348 SYFDPV 353
           S     
Sbjct: 322 SDISGD 327



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 49/120 (40%), Gaps = 10/120 (8%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-------DREGKEQLYVMQSNGS 336
           I +++++++A +R+ +         +SPD +++ +            GK  +    + GS
Sbjct: 150 IVAINVETSAVQRVVSGADFYYLPQFSPDGARVSWVEWDHPNLPFAAGKLYVGDWTAQGS 209

Query: 337 --DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
             + + I+     S  +P W P G L  + K +G    +  +   G  E L+       A
Sbjct: 210 IQNARLIAGQNHESVAEPRWGPDGSLF-YGKETGSHRKLYRIPPGGRPEELIQLAGLDDA 268


>gi|225156199|ref|ZP_03724679.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
 gi|224803089|gb|EEG21332.1| conserved hypothetical protein [Opitutaceae bacterium TAV2]
          Length = 469

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 38/286 (13%), Positives = 94/286 (32%), Gaps = 46/286 (16%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           +F   +    ++   +  ++R G     L  +R Q    P +       A+    + +  
Sbjct: 186 IFNLNTGRERVLDRPVYAVNRSGTTAVSLNFARLQ-HQRPGYGYAGVPDAWREVLEPEDD 244

Query: 238 RVYLMDTRIDRAP-----------KRIGNFRSMIL---APRFSSNGKRALISVQKD---- 279
            VY +D    R+            +R  +F  +       +F ++ +R  +  ++     
Sbjct: 245 GVYAIDLASGRSRLILSVAEAARFQRGADFGGLTHRFNHAQFGADDRRFAVLHRRKSPNQ 304

Query: 280 --EAMDIYSVDLQSNATERLTNT---LFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
              +  + ++D+       LT+       +    +    + + + +  E     Y+   N
Sbjct: 305 EVGSTRLLTLDIDGGGLRCLTDHELVSHYD----WRGGDAILAWANRNESGPHYYLFDDN 360

Query: 335 GSDQ-KRISQDKEA---SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
            +   +RI    +          +SP G+ +    +  ++     +     + R  V+  
Sbjct: 361 DAPPARRIEMIGDGVLTCDGHCSFSPNGEWVLSDTYPDKRDHHRTLFLWHMESRRRVDIG 420

Query: 391 NLQ------------APTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                           P W+  GRS+      +G    ++Y ID++
Sbjct: 421 RFLSPPMEWQIRCDLHPRWARDGRSVCIDSIHEGPR--QMYRIDVS 464



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 18/173 (10%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +L   +S    +    L  +D DG  +R LT    +++    +      +A+A   +E  
Sbjct: 295 VLHRRKSPNQEVGSTRLLTLDIDGGGLRCLTDH--ELVSHYDWRGGDAILAWAN-RNESG 351

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRAL---ISVQKDEAMDIYSVDL 289
              YL D       +RI      +L       FS NG+  L      ++D    ++   +
Sbjct: 352 PHYYLFDDNDAPPARRIEMIGDGVLTCDGHCSFSPNGEWVLSDTYPDKRDHHRTLFLWHM 411

Query: 290 QSNATERLTNTLFI--------NISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +S     +   L          ++   ++ D   +  +S  EG  Q+Y +  +
Sbjct: 412 ESRRRVDIGRFLSPPMEWQIRCDLHPRWARDGRSVCIDSIHEGPRQMYRIDVS 464


>gi|123481570|ref|XP_001323587.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121906455|gb|EAY11364.1| hypothetical protein TVAG_379460 [Trichomonas vaginalis G3]
          Length = 1003

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 62/194 (31%), Gaps = 37/194 (19%)

Query: 265 FSSNGKRALISVQKDE-------AMDIYSVDLQSNATERLTNTLFINISASYS-PDSSQI 316
           +SSN K   ++  ++           +  +D+ S   E+ T+ +    +  ++  D   I
Sbjct: 159 WSSNSKSVYVADNRNNIYILREYGTKVIKIDISSLGIEKHTDQI---TNLFWNKRDGGTI 215

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           +  + R G   ++  +   S    I+   E       WS  G        +     I + 
Sbjct: 216 L-VTFRSGVVAIFREKDETSPITVIT---ETRITHAAWSRDGSRFVIAGKNQTTNKIFIQ 271

Query: 377 KKDGSQERLLV---EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
               S   +     E + + +  +SP    L                ID      T+I T
Sbjct: 272 FYTSSGNVIRTMELEGNYISSICFSPDDTKLA-------------VCID---TKLTIIQT 315

Query: 434 PAYASDPQWVGFMD 447
                   WV FM+
Sbjct: 316 VPRVP---WVYFMN 326



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 22/176 (12%)

Query: 201 ANIRYLTPSRDQILFEPR---FSPNQQKVAYATYDDE---------DILRVYLMDTRIDR 248
            NI        ++ F P+   +S N + V  A   +           ++++ +    I++
Sbjct: 138 GNINGSQKWNSELDFLPKAMCWSSNSKSVYVADNRNNIYILREYGTKVIKIDISSLGIEK 197

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
              +I N            +G   L++  +   + I+    +++    +T T      A+
Sbjct: 198 HTDQITNLFWNKR------DGGTILVTF-RSGVVAIFREKDETSPITVITETR--ITHAA 248

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAF 363
           +S D S+ V     +   ++++     S     + + E +Y   + +SP    +A 
Sbjct: 249 WSRDGSRFVIAGKNQTTNKIFIQFYTSSGNVIRTMELEGNYISSICFSPDDTKLAV 304


>gi|321474590|gb|EFX85555.1| hypothetical protein DAPPUDRAFT_300401 [Daphnia pulex]
          Length = 705

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 58/161 (36%), Gaps = 30/161 (18%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-----ASYSPDSSQIVFESDREG 324
            R  +    D  ++I+ +D  + + E +     ++        +++  +  +   SD +G
Sbjct: 485 NRVALGFCNDGGIEIWEIDESTKSAEIVQRFQHVDGEDWVKHMAWNERTKCLAACSD-DG 543

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD-----------------LIAFTKFS 367
             +++ M S+    + I   K    +   W P G                  ++A + F+
Sbjct: 544 WIKIWSMDSD----QPIHATKVHGCYSLAWRPNGKPTDDEGVDAARKSADNFILATSGFA 599

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLI 405
           G+   +        + ++L    N       ++SP GR L 
Sbjct: 600 GDGKIVIWTPLAEEKTKILFSSQNSDWATSLSFSPDGRFLA 640


>gi|310817471|ref|YP_003949829.1| hypothetical protein STAUR_0193 [Stigmatella aurantiaca DW4/3-1]
 gi|309390543|gb|ADO68002.1| uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 569

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 89/240 (37%), Gaps = 20/240 (8%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V S     S+ +    G   + L   R+       FS + Q++  A+ D      V L +
Sbjct: 290 VASASQSASVRLWGMAGGTSQELASGREPPPVAVGFSQDGQRLLSASRDG----VVRLWN 345

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R   + + +    +       S  G  A++S   D  + +++++ +     R       
Sbjct: 346 PREPASGRILVKLPAGPTVLATSPAGPFAVLSGS-DGVLRLWNLE-EEKEVRRYGEEGGA 403

Query: 304 NISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                ++S D  ++ F +  E    ++ +++ G   KR+       Y    ++  G+++A
Sbjct: 404 AYYPVAFSADGKRL-FAAREEHGVDVWEVET-GQQVKRLEPSG---YEVTSFAASGEVVA 458

Query: 363 FTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                G    I + K    +   RL   +  ++  + S  G+ ++       D+  +L+ 
Sbjct: 459 AGTRDG---HIQLWKAQTLEPLVRLSGHEYGVRTVSLSADGKWVL---SVGEDSTVRLWD 512



 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 66/175 (37%), Gaps = 10/175 (5%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           LMDTR  +  K   N +   +A    S +GK    S  +  ++ ++ +      ++ L +
Sbjct: 258 LMDTRNGQWFKLALNGQVSAIAALVVSPDGKHVA-SASQSASVRLWGM--AGGTSQELAS 314

Query: 300 TLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  A  +S D  +++  S R+G  +L+          RI     A       SP G
Sbjct: 315 GREPPPVAVGFSQDGQRLLSAS-RDGVVRLW--NPREPASGRILVKLPAGPTVLATSPAG 371

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDG 412
              A    S     +  ++++    R   E      P  +S  G+ L  +R++ G
Sbjct: 372 PF-AVLSGSDGVLRLWNLEEEKEVRRYGEEGGAAYYPVAFSADGKRLFAAREEHG 425



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 62/199 (31%), Gaps = 14/199 (7%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSP 221
           Y  +       N R+ F       G    S+ + D  DG  +  L    D  + +   S 
Sbjct: 25  YDRLAAAALSSNLRLAFARSLDGGG----SIEIFDASDGTQLHALQGPEDSDIEKIALSG 80

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   +A   Y        +L D       +R+   +  +LA   S +G R  ++  +D  
Sbjct: 81  DGAWLAAIPYKGPP----WLWDLSGKPRVRRLRGAKGSVLAVAVSEDGTR-TVAAGEDGF 135

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + +++        + L       +S + S D   ++  S+     Q  +      +    
Sbjct: 136 VYVWN-SRTGRLLKTLRGGKRNMVSVAVSGDGRWVLAGSE---DAQARLWDLRTGNLVWS 191

Query: 342 SQDKEASYFDPVWSPQGDL 360
            +           S  G  
Sbjct: 192 MEGNAIPIESVALSRDGTR 210


>gi|301066853|ref|YP_003788876.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lactobacillus
           casei str. Zhang]
 gi|300439260|gb|ADK19026.1| Dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lactobacillus
           casei str. Zhang]
          Length = 658

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/186 (15%), Positives = 62/186 (33%), Gaps = 23/186 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-----VYLMDTRIDRAPKRIGNFRSM 259
            L   R+        SP+ Q +A+      D         YL++    +           
Sbjct: 173 RLVMGREHEFEVGAISPDGQTLAFTAERLPDDPNDFSQATYLLNLVDQQVTMVNDQLPQA 232

Query: 260 ILAP-RFSSNGKRALISVQKDEAMD-----IYSVDLQSNATERLTNTLFINISASYSPDS 313
            L+P  FS++GK+ L+    +   +     ++  DL +   + + + +  +I    + D 
Sbjct: 233 ALSPEAFSADGKQLLLVGSDNHLPNVSQSHLWHYDLATKTLQDVADDIDFDIPGHVNGDF 292

Query: 314 SQIVFESDRE----------GKEQLYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLI 361
            Q + E   +          G +        G   ++++          D   +P    +
Sbjct: 293 QQDLSEKVADFATADYYLTIGFDHGKTSLYAGGPDEQLTPLIGGRRHVTDYALTPDHHGV 352

Query: 362 AFTKFS 367
            FT+ +
Sbjct: 353 VFTEST 358


>gi|111309080|gb|AAI21511.1| wdr50 protein [Xenopus (Silurana) tropicalis]
          Length = 492

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 68/188 (36%), Gaps = 9/188 (4%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSR--DQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           V++     S+ +   DG   + +         +++ +FS + ++V       +      +
Sbjct: 202 VMTAGFDRSVSLFQVDGKRNQKIQSIHLEKFPIYKAQFSADGEQVIATGLRSKMFYIYDM 261

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           M   I   P+  G    +I     S NG   L+      A  ++ + +++          
Sbjct: 262 MGGNIITVPRIRGLEERVIQQFEVSPNGSFLLL---NGSAGYLHLLSMKTKELIGSMKMN 318

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDL 360
             ++ A +SPDSS+ VF +  +G   +YV          + + +          S  G  
Sbjct: 319 GKSMKAVFSPDSSK-VFSNSDDGF--VYVWDVRSRQCLNKFTDEGSICGTSIALSRDGRY 375

Query: 361 IAFTKFSG 368
           I+    SG
Sbjct: 376 ISCGSNSG 383


>gi|62860162|ref|NP_001016635.1| UTP18, small subunit (SSU) processome component, homolog [Xenopus
           (Silurana) tropicalis]
          Length = 492

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 68/188 (36%), Gaps = 9/188 (4%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSR--DQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           V++     S+ +   DG   + +         +++ +FS + ++V       +      +
Sbjct: 202 VMTAGFDRSVSLFQVDGKRNQKIQSIHLEKFPIYKAQFSADGEQVIATGLRSKMFYIYDM 261

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           M   I   P+  G    +I     S NG   L+      A  ++ + +++          
Sbjct: 262 MGGNIITVPRIRGLEERVIQQFEVSPNGSFLLL---NGSAGYLHLLSMKTKELIGSMKMN 318

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDL 360
             ++ A +SPDSS+ VF +  +G   +YV          + + +          S  G  
Sbjct: 319 GKSMKAVFSPDSSK-VFSNSDDGF--VYVWDVRSRQCLNKFTDEGSICGTSIALSRDGRY 375

Query: 361 IAFTKFSG 368
           I+    SG
Sbjct: 376 ISCGSNSG 383


>gi|89269519|emb|CAJ83363.1| WD repeat domain 50 [Xenopus (Silurana) tropicalis]
          Length = 522

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 68/188 (36%), Gaps = 9/188 (4%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSR--DQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           V++     S+ +   DG   + +         +++ +FS + ++V       +      +
Sbjct: 232 VMTAGFDRSVSLFQVDGKRNQKIQSIHLEKFPIYKAQFSADGEQVIATGLRSKMFYIYDM 291

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           M   I   P+  G    +I     S NG   L+      A  ++ + +++          
Sbjct: 292 MGGNIITVPRIRGLEERVIQQFEVSPNGSFLLL---NGSAGYLHLLSMKTKELIGSMKMN 348

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDL 360
             ++ A +SPDSS+ VF +  +G   +YV          + + +          S  G  
Sbjct: 349 GKSMKAVFSPDSSK-VFSNSDDGF--VYVWDVRSRQCLNKFTDEGSICGTSIALSRDGRY 405

Query: 361 IAFTKFSG 368
           I+    SG
Sbjct: 406 ISCGSNSG 413


>gi|281418051|ref|ZP_06249071.1| YD repeat protein [Clostridium thermocellum JW20]
 gi|281409453|gb|EFB39711.1| YD repeat protein [Clostridium thermocellum JW20]
 gi|316939909|gb|ADU73943.1| YD repeat protein [Clostridium thermocellum DSM 1313]
          Length = 1917

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 59/178 (33%), Gaps = 19/178 (10%)

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---- 322
             +G         D A ++ S    +  T R T      +S   +PD  +I F+ DR    
Sbjct: 1164 PDGTNIKY--DYDYAGNLVSTTDGNGNTTRYTYNSLNLLSEIINPDGRKITFKYDRQGRV 1221

Query: 323  ------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                  +G+   Y   ++ +   R   ++E       ++  G L A    SG        
Sbjct: 1222 VQRIGKDGRSTYYTYNADNNITGR--WEEEGQMERYEYNIDGSLAA--SISGTTIHTYTY 1277

Query: 377  KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               G  +        +    ++ +G   + S+  D       Y+ D+ GR   + N  
Sbjct: 1278 TLAGRLKSKTTNGRKVLEYDYNKNG---LVSKVTDISGTPVEYTYDVLGRLTAVTNGG 1332


>gi|224827317|ref|ZP_03700408.1| putative transmembrane protein [Lutiella nitroferrum 2002]
 gi|224600465|gb|EEG06657.1| putative transmembrane protein [Lutiella nitroferrum 2002]
          Length = 325

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 75/219 (34%), Gaps = 34/219 (15%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSVDL 289
             D  +VY  D R  +  + +  F    ++PR   FS +G+   IS      ++ +    
Sbjct: 48  KSDSDKVYAYDLRSGKMRQALEGF----ISPRNILFSPDGQSFYISDSTKGTIEKW---- 99

Query: 290 QSNATERLTNTLFINISA-----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
               +  LT +  + +       + S D S++ F +++     +            +   
Sbjct: 100 ---DSTSLTRSASMAVGPGAFGTTLSRDGSRL-FVNNQA-TSTVTAFDPATLQPLAVMTG 154

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSG 401
                     S     +  T F G+K  I V+   G   + L E        A   S  G
Sbjct: 155 FAQPRQGIQLSTDDKALFVTNFLGDK--ITVVDPSG--FKTLAEIGGFNKIRAIAISRDG 210

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           ++L ++     DT   L  +D+ GR           SDP
Sbjct: 211 KTL-YAANSGSDT---LAEVDVEGRYVRRSVKVG--SDP 243


>gi|56460135|ref|YP_155416.1| dipeptidyl peptidase IV [Idiomarina loihiensis L2TR]
 gi|56179145|gb|AAV81867.1| Dipeptidyl peptidase IV [Idiomarina loihiensis L2TR]
          Length = 743

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/222 (15%), Positives = 64/222 (28%), Gaps = 55/222 (24%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-------------- 263
           +F+P  Q ++Y     E+  R  L    I+    ++      I A               
Sbjct: 49  KFAPGGQYLSYLKGSKEEPQRYDLWLYDIEAETHKLLVAADQIAASELELSDEEKARRER 108

Query: 264 -----------RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                       +S+ G   L     D    ++          +LT T        +SP 
Sbjct: 109 QRISGSGIIEYSWSAKGDALLFPYNGD----VFYYQTDEEKVTQLTKTDAFETDVKFSPK 164

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY----------------FDPVWSP 356
           SS + F  +    + LY +     ++  ++ +   +                     W+P
Sbjct: 165 SSYVSFVRE----QNLYFIDLASGEEHAVTTEGGNTLKFGMAEFVAQEEMKRMTGYWWAP 220

Query: 357 QGDLIAFTKFS------GEKFAIGVMKKDGSQERLLVEDSNL 392
               IA TK          +  I   + +  Q+R     S+ 
Sbjct: 221 DESAIALTKVDESPVPLATRSEIYADRIETIQQRYPFAGSDN 262



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 31/230 (13%), Positives = 69/230 (30%), Gaps = 30/230 (13%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++P++  +A    D+  +      +   DR       +                  +  
Sbjct: 217 WWAPDESAIALTKVDESPVPLATRSEIYADRIETIQQRYP----------------FAGS 260

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFE--SDREGKEQLYVMQ 332
            +  +D+    +    T  L      +   +   +  DS ++ ++  S  +    L++  
Sbjct: 261 DNVEIDLGVYQIADKQTNWLQLDKLNDGYLARVKWVGDSKRLSYQWQSRDQQALTLWLYN 320

Query: 333 SNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                Q+ +  +   S+ +      +        +         + + + DGS  R L  
Sbjct: 321 RTSETQRELLTETSDSWLNLHDDLYFLNDNKHFIWASERSGFKHLYLYRLDGSLIRQLSS 380

Query: 389 DSNLQAPTWSPSGR--SLIFSRKKDGDTGSKLYSIDLNGR---NETLINT 433
                    +      +L F+ +K     S LY   LN     N T I T
Sbjct: 381 GDWQVDELEAIDESTGTLYFTARKKSPLESHLYRTQLNASSAANPTRITT 430



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 14/101 (13%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           +++RIS      Y    WS +GD + F         +   + D  +   L +    +   
Sbjct: 107 ERQRISGSGIIEY---SWSAKGDALLF----PYNGDVFYYQTDEEKVTQLTKTDAFETDV 159

Query: 397 -WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            +SP    + F R+++      LY IDL    E  + T   
Sbjct: 160 KFSPKSSYVSFVREQN------LYFIDLASGEEHAVTTEGG 194


>gi|125973888|ref|YP_001037798.1| YD repeat-containing protein [Clostridium thermocellum ATCC 27405]
 gi|125714113|gb|ABN52605.1| YD repeat protein [Clostridium thermocellum ATCC 27405]
          Length = 1917

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 59/178 (33%), Gaps = 19/178 (10%)

Query: 267  SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR---- 322
             +G         D A ++ S    +  T R T      +S   +PD  +I F+ DR    
Sbjct: 1164 PDGTNIKY--DYDYAGNLVSTTDGNGNTTRYTYNSLNLLSEIINPDGRKITFKYDRQGRV 1221

Query: 323  ------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
                  +G+   Y   ++ +   R   ++E       ++  G L A    SG        
Sbjct: 1222 VQRIGKDGRSTYYTYNADNNITGR--WEEEGQMERYEYNIDGSLAA--SISGTTIHTYTY 1277

Query: 377  KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               G  +        +    ++ +G   + S+  D       Y+ D+ GR   + N  
Sbjct: 1278 TLAGRLKSKTTNGRKVLEYDYNKNG---LVSKVTDISGTPVEYTYDVLGRLTAVTNGG 1332


>gi|298713268|emb|CBJ26964.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 517

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 84/220 (38%), Gaps = 10/220 (4%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
           ++ +     R I            +       +R+LF + S  +   K ++ + +     
Sbjct: 57  RYSTVLVGSRLIVIVYMSISILPCSQIILPAVTRMLFGTFSGATAADK-TVQIWETGNGK 115

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +        Q L +  ++ N +K+A A+ D      + + D    +  + +    + +  
Sbjct: 116 LINTLTGHAQGLSDLAWTENSRKIATASDDK----LIKIFDVETGQEVQSMEGHENYVFC 171

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESD 321
             F++     L+S   DE + I+  D+ +      + +      +A+++ D + +V  S 
Sbjct: 172 VNFNNPQANLLVSGSFDEKVKIW--DVATGKCLRTMASHSEPVTAAAFNADGTGVVSGS- 228

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +G  +L+   S G+  K I  +   S     +SP G  +
Sbjct: 229 ADGLIRLWD-SSTGACLKTIFAEGNPSVSFSTFSPNGKYV 267



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 83/242 (34%), Gaps = 30/242 (12%)

Query: 129 RLWDVKDRKQI-------IGKKFFSSPASWRKIAHTISDDIYQSITGEKG------DFNS 175
           ++W+  + K I        G    +   + RKIA    D + +    E G      + + 
Sbjct: 107 QIWETGNGKLINTLTGHAQGLSDLAWTENSRKIATASDDKLIKIFDVETGQEVQSMEGHE 166

Query: 176 RILFVSESV-------VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
             +F            VSG     + + D           S  + +    F+ +   V  
Sbjct: 167 NYVFCVNFNNPQANLLVSGSFDEKVKIWDVATGKCLRTMASHSEPVTAAAFNADGTGVVS 226

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            + D      + L D+      K I       +    FS NGK  L +   D+++ ++ +
Sbjct: 227 GSADG----LIRLWDSSTGACLKTIFAEGNPSVSFSTFSPNGKYVL-AGTLDDSLRLWQI 281

Query: 288 DLQSNATERLTNTLFINISASYSP--DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
              +   +  T    +N   S +   D ++ V     +G   ++ + S+ S  +R+    
Sbjct: 282 GHDTKCVK--TYKGHVNRRYSVTACFDGNKRVVSGSEDGSIYIWDINSSKSVVQRLQGHS 339

Query: 346 EA 347
           +A
Sbjct: 340 DA 341


>gi|167718720|ref|ZP_02401956.1| hypothetical protein BpseD_06834 [Burkholderia pseudomallei DM98]
          Length = 391

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 50/349 (14%), Positives = 96/349 (27%), Gaps = 43/349 (12%)

Query: 93  NPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASW- 151
           NP          + G   L+ G     G D + V +R +D    +        +   S+ 
Sbjct: 13  NPAFAQDASAGPAGGVYNLLVGTYTGSGSDGIYV-YR-FDTDSGRVSPVSSAKAENPSYL 70

Query: 152 ---RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP 208
              R   H  +  + +             +   +          +  +   G +  YL+ 
Sbjct: 71  VASRDGRHVYA--VNELPGDAGPASVRGGVSAFDFDAKTGALKFVNRVSAQGNDPCYLSL 128

Query: 209 SRDQ-ILFEPRFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           S D   L    +S    P      +       +    L        P +     + + + 
Sbjct: 129 SPDGRYLVVANYSVASDPGGSFSVFPVEATGALGAAVLNVHHEGTGPVKGRQDGAHVHSI 188

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +GK   +  Q   A  +YS                      Y+PD S+ +      
Sbjct: 189 VFSPDGKYLFV--QDLGADKLYSY--------------------RYTPDGSRGL----IG 222

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             E  Y +   GS  + +       +          +  +    G    +  +       
Sbjct: 223 PTESRYTLAKAGSGPRHLVFGANGRFAYVTNELNASVDVYRYDDGRLAHVETVPMTAPGF 282

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
              V    L     SP GR L ++  +       +Y+++      TL+ 
Sbjct: 283 AGKVGGGALHL---SPDGRFL-YATNRGDANDIVIYAVNAADGKLTLVG 327


>gi|162453406|ref|YP_001615773.1| WD repeat-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161163988|emb|CAN95293.1| WD-repeat protein [Sorangium cellulosum 'So ce 56']
          Length = 1142

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/165 (15%), Positives = 60/165 (36%), Gaps = 23/165 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS +G++ + S  +D  + ++ V       +RL          ++ PD   +V      
Sbjct: 68  AFSPDGRQIV-SGSEDRVLLVWDV-ATGQVVQRLEGHGGWIRDCAFLPDGRGVV---SGG 122

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              +++V      +++R+         +     P G  I      G  F +    + GS 
Sbjct: 123 WGGEVFVWDRRSGERRRLELLSPTDAVNSLSVRPDGGEILV----GTLFGVARAWELGSG 178

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKK--------DGDTGSKLY 419
              L +D+ ++     P  R+++++            G+ G  ++
Sbjct: 179 AATLEQDALVR-----PGERNVVWATGYLDDGRAFAGGNAGVVVW 218



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 9/101 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ +++   + D      + + D    +  +R+      I    F  +G+  +    
Sbjct: 68  AFSPDGRQIVSGSEDR----VLLVWDVATGQVVQRLEGHGGWIRDCAFLPDGRGVV---S 120

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYS--PDSSQI 316
                +++  D +S    RL      +   S S  PD  +I
Sbjct: 121 GGWGGEVFVWDRRSGERRRLELLSPTDAVNSLSVRPDGGEI 161


>gi|156398323|ref|XP_001638138.1| predicted protein [Nematostella vectensis]
 gi|156225256|gb|EDO46075.1| predicted protein [Nematostella vectensis]
          Length = 482

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 53/130 (40%), Gaps = 11/130 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ L DTR +     I   +  + +   S +  + L S + D    +  +DL+S +    
Sbjct: 353 RIRLWDTRSESIVSEIL-LQGKVTSLDLSPDMNQVLASTRDD---TLKVIDLRSTSQVVA 408

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T + F       SPD    +  S   G   +Y+  ++ +  +++ ++  ++     W P 
Sbjct: 409 TCSGF----PLSSPDGQYCICGSQDGG---VYIWNNSTAKLEKVLREHSSAVIVSAWHPS 461

Query: 358 GDLIAFTKFS 367
           G +I     +
Sbjct: 462 GGIIITCDRN 471


>gi|113475693|ref|YP_721754.1| hypothetical protein Tery_2038 [Trichodesmium erythraeum IMS101]
 gi|110166741|gb|ABG51281.1| FG-GAP [Trichodesmium erythraeum IMS101]
          Length = 690

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 80/233 (34%), Gaps = 17/233 (7%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE----PRFSPNQQKV 226
           GDFN+  +       +    N + +M+ +G       P      ++      F+ +    
Sbjct: 444 GDFNADGVADIFWRHNKNRGNRVWLMNDNGTRKSTKNPGNFGAAWDVVGVGDFNADGVDD 503

Query: 227 AYATYDDEDILRVYLMDTRIDR----APKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
                D++ + R++LM+    R     P   G    +     F+++G   ++    +   
Sbjct: 504 ILWRRDNQKLNRIWLMNNNGKRKQLVNPGNFGAAWDVAGVADFNADGVDDILWRHNNGRN 563

Query: 283 DIYSVDLQSN-----ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            I  ++             L +T  +   A ++ D    +    + G   +++M  +G+ 
Sbjct: 564 RISFMNNDGKLDNTVNPGGLGSTWDVAGVADFNADGVDDILWRKKNGTNSIWLMNGDGTH 623

Query: 338 QKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
              I+     S +D      ++  G      +       I +M  D ++ + L
Sbjct: 624 DDIINPGSFGSAWDVAGVADFNADGLTDILWRHDNGANRIWLMDDDSTRAQNL 676



 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 21/193 (10%), Positives = 71/193 (36%), Gaps = 12/193 (6%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR----FSPNQQKV 226
           GDFN+  +            N + +M+ +G   + + P      ++      F+ +    
Sbjct: 494 GDFNADGVDDILWRRDNQKLNRIWLMNNNGKRKQLVNPGNFGAAWDVAGVADFNADGVDD 553

Query: 227 AYATYDDEDILRVYLMD---TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
               +++      ++ +         P  +G+   +     F+++G   ++  +K+    
Sbjct: 554 ILWRHNNGRNRISFMNNDGKLDNTVNPGGLGSTWDVAGVADFNADGVDDILWRKKNGTNS 613

Query: 284 IYSVDLQSNATERL---TNTLFINIS--ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           I+ ++      + +   +     +++  A ++ D    +      G  ++++M  + +  
Sbjct: 614 IWLMNGDGTHDDIINPGSFGSAWDVAGVADFNADGLTDILWRHDNGANRIWLMDDDSTRA 673

Query: 339 KRISQDKEASYFD 351
           + ++     S +D
Sbjct: 674 QNLNPGAFGSAWD 686



 Score = 43.1 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 94/258 (36%), Gaps = 34/258 (13%)

Query: 211 DQILFEPRFSPNQQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR----F 265
           D +    +F  N   VA      +    R++LM+    R   +                F
Sbjct: 387 DPLDQPVKFDFNGDGVADILWRRENGPNRIWLMNDNGTRKSTKNPGNFGAAWDVAGVGDF 446

Query: 266 SSNG-KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY--------SPDS-SQ 315
           +++G         K+    ++ ++     T + T     N  A++        + D    
Sbjct: 447 NADGVADIFWRHNKNRGNRVWLMNDNG--TRKSTKNPG-NFGAAWDVVGVGDFNADGVDD 503

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQG-DLIAFTKFSGEK 370
           I++  D +   ++++M +NG  ++ ++     + +D      ++  G D I +   +G  
Sbjct: 504 ILWRRDNQKLNRIWLMNNNGKRKQLVNPGNFGAAWDVAGVADFNADGVDDILWRHNNGRN 563

Query: 371 FAIGVMKKDGSQERLLVEDSN------LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             I  M  DG  +  +                ++  G   I  RKK+G     ++ ++ +
Sbjct: 564 -RISFMNNDGKLDNTVNPGGLGSTWDVAGVADFNADGVDDILWRKKNGTN--SIWLMNGD 620

Query: 425 GRNETLINTPAYASDPQW 442
           G ++ +IN  ++ S   W
Sbjct: 621 GTHDDIINPGSFGS--AW 636


>gi|325298595|ref|YP_004258512.1| Dipeptidyl-peptidase IV [Bacteroides salanitronis DSM 18170]
 gi|324318148|gb|ADY36039.1| Dipeptidyl-peptidase IV [Bacteroides salanitronis DSM 18170]
          Length = 811

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 11/123 (8%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF- 371
             + +  S+R+G   LY+    G+ + RI++            P    I FT    E   
Sbjct: 402 GKEFIQWSERDGWAHLYLYDDQGNLKNRITKGPWHVERVVKVDPATRTIYFTANGREANE 461

Query: 372 -----AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSIDLN 424
                 +  +  DGS  + L E             R ++  +SR    +T      ID N
Sbjct: 462 NPYYEHLYKVNADGSGLKRLTEGEYFHETDMDDDARFIVDNYSRV---NTVPNAVLIDRN 518

Query: 425 GRN 427
           G  
Sbjct: 519 GNK 521



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 58/174 (33%), Gaps = 15/174 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N  Y    RD       +  +  +  + T    D+ R+ +    I +          M 
Sbjct: 330 ENRPYQMKERDAEFIPDVWQGDNNR-FFLTRSSRDLHRIDVCTYTIGQDSIVPIVKERMN 388

Query: 261 LAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISASYSPDSS 314
                        GK  +   ++D    +Y  D Q N   R+T   + +       P + 
Sbjct: 389 TYQETRPIQVFNGGKEFIQWSERDGWAHLYLYDDQGNLKNRITKGPWHVERVVKVDPATR 448

Query: 315 QIVFESD-REGK-----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            I F ++ RE       E LY + ++GS  KR+++ +   + +         I 
Sbjct: 449 TIYFTANGREANENPYYEHLYKVNADGSGLKRLTEGEY--FHETDMDDDARFIV 500


>gi|312118506|ref|XP_003151582.1| WD40-like Beta Propeller Repeat family protein [Loa loa]
 gi|307753253|gb|EFO12487.1| WD40-like Beta Propeller Repeat family protein [Loa loa]
          Length = 97

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 39/98 (39%), Gaps = 7/98 (7%)

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMKKDGSQERLLVE 388
           M ++GS  +R+++     +   + +     + FT      + F I  +  DGS+   +  
Sbjct: 1   MHTDGSGLRRLTKSGTNLWPTFLTN---KRVLFTSNGILNDTFNIFAVNIDGSELEQVTA 57

Query: 389 DSNLQA--PTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           D + +   P  S     L++SR         LY   ++
Sbjct: 58  DRDYKNFYPAVSHDSLKLLWSRSTINAQQLDLYMALID 95



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/83 (14%), Positives = 39/83 (46%), Gaps = 4/83 (4%)

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDR--EGKEQLYVMQSNGSDQKRISQD 344
           +    +   RLT +   N+  ++   + +++F S+        ++ +  +GS+ ++++ D
Sbjct: 1   MHTDGSGLRRLTKS-GTNLWPTFL-TNKRVLFTSNGILNDTFNIFAVNIDGSELEQVTAD 58

Query: 345 KEASYFDPVWSPQGDLIAFTKFS 367
           ++   F P  S     + +++ +
Sbjct: 59  RDYKNFYPAVSHDSLKLLWSRST 81



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
           M  DGS  R L +      PT+  + + ++F+     +    +++++++G     +    
Sbjct: 1   MHTDGSGLRRLTKSGTNLWPTFLTN-KRVLFTSNGILNDTFNIFAVNIDGSELEQVTADR 59

Query: 436 Y 436
            
Sbjct: 60  D 60


>gi|225174344|ref|ZP_03728343.1| hypothetical protein DealDRAFT_0198 [Dethiobacter alkaliphilus AHT
           1]
 gi|225170129|gb|EEG78924.1| hypothetical protein DealDRAFT_0198 [Dethiobacter alkaliphilus AHT
           1]
          Length = 320

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 55/150 (36%), Gaps = 24/150 (16%)

Query: 307 ASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           A+ SPD +++ F             + V+     +   I ++ +    + +WSP+G  +A
Sbjct: 173 ATLSPDENKLAFSVHSYFAASYMSFVGVVNLETEEVTLIDEENDGQVDEFLWSPEGTYLA 232

Query: 363 FTKFS--GEKFAIGVMKKDGSQERLLVEDSNL--QAP--------------TWSPSGRSL 404
           +T  +  GE F +  +   GS E+          + P               WS S   L
Sbjct: 233 YTLTTAVGEGFYL-TVDNAGSMEKEFTLSGGDLSEDPDLSAEDTFPRFRNVDWSESEERL 291

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            F+     +     +SID  G +    + P
Sbjct: 292 YFTADIHLEGEFD-WSIDPQGTDLRKQSDP 320



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/195 (10%), Positives = 56/195 (28%), Gaps = 20/195 (10%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            +  E+G       F      +    + +        +  Y        L     SP++ 
Sbjct: 121 QVVDEEGSIIFEYTFAEFKDWAAENWDDIFEETPAFMDPVYPKDLYPFFLDTATLSPDEN 180

Query: 225 KVAYATYDD---EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDE 280
           K+A++ +       +  V +++   +            +    +S  G     ++     
Sbjct: 181 KLAFSVHSYFAASYMSFVGVVNLETEEVTLIDEENDGQVDEFLWSPEGTYLAYTLTTAVG 240

Query: 281 AMDIYSVDLQSNATERLT----------NTLFINISAS-----YSPDSSQIVFESDREGK 325
                +VD   +  +  T          +    +         +S    ++ F +D   +
Sbjct: 241 EGFYLTVDNAGSMEKEFTLSGGDLSEDPDLSAEDTFPRFRNVDWSESEERLYFTADIHLE 300

Query: 326 EQL-YVMQSNGSDQK 339
            +  + +   G+D +
Sbjct: 301 GEFDWSIDPQGTDLR 315


>gi|163760770|ref|ZP_02167850.1| adenylate cyclase protein [Hoeflea phototrophica DFL-43]
 gi|162282092|gb|EDQ32383.1| adenylate cyclase protein [Hoeflea phototrophica DFL-43]
          Length = 623

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 46/122 (37%), Gaps = 19/122 (15%)

Query: 50  IAFTKFVSIDELGGK------VSEVVSKDLQR-SDVFNLISQDSFKQKITNPDSIPRFQD 102
           IA   F ++     +      ++E +  DL   S +F ++ +++          +     
Sbjct: 200 IAVLPFENMSSDPEQEFFSDGITEDIIIDLSNVSGLF-VLGRNTVFSHKGKVVDLVSVA- 257

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS--D 160
              LG   +V G V K G +R+R+  +L +      +   +F       R +    +  D
Sbjct: 258 -KQLGVAYVVQGSVRKAG-NRVRINAQLIEGATGGHVWADRFD------RDLTDIFAVQD 309

Query: 161 DI 162
           +I
Sbjct: 310 EI 311


>gi|170595768|ref|XP_001902512.1| Eif3s9 protein [Brugia malayi]
 gi|158589775|gb|EDP28638.1| Eif3s9 protein, putative [Brugia malayi]
          Length = 642

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/170 (14%), Positives = 50/170 (29%), Gaps = 7/170 (4%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV-AYATYDDEDILRVYLMDTRIDRAPK 251
           + + D  G +I  L+    +      + P+  K         +    +Y +DT    AP+
Sbjct: 366 IEIFDARGKDISVLSMPLSESFIAFDWEPSGDKFCVLVGSQHKSTPLIYYLDT-TKHAPQ 424

Query: 252 RIGNFRSMILAPR--FSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFINISA 307
            I  F  M       ++  G   ++      + +I  +D       R  L      N   
Sbjct: 425 LISKFEPMERFSDVLWAPAGGWLVVFSAGTASGNIMFIDSNGTRPTRTNLVEYPGFN-KG 483

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           S+ P            G +     +      + + +          W P+
Sbjct: 484 SWDPTGRYFTAACTIGGGKGDTGYRIYTFQGRELYRKPLDRLMQFKWRPR 533


>gi|126336034|ref|XP_001378111.1| PREDICTED: similar to acylamino acid-releasing enzyme, AARE {EC
           3.4.19.1} [Monodelphis domestica]
          Length = 730

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 17/129 (13%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR------VYL 241
             +++L  +D  G     L+      +  PR SP+Q ++ Y    +    +      +Y 
Sbjct: 275 NRRSALFYVDLTGGKCELLSDD-SMAMCSPRLSPDQCRIVYLRNTNLSPHQQCSQLCLYD 333

Query: 242 MDTRIDRA-----PKRI-GNFRSM--ILAP--RFSSNGKRALISVQKDEAMDIYSVDLQS 291
             T++        P+++ GNF  +   L P   +S++ +R +         D+++V+ Q+
Sbjct: 334 WYTKVTSVVVDVVPRQLEGNFSGIYCNLLPLGCWSADSERVVFDSGLRSRQDLFAVNTQT 393

Query: 292 NATERLTNT 300
            +   LT  
Sbjct: 394 GSVTSLTAG 402



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 57/181 (31%), Gaps = 29/181 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDIL----------RVYL 241
           LCV+D +  NI  L    + +      +SP    V +  +  E                 
Sbjct: 222 LCVLDIESGNISVLEGVPENVSPGQAFWSPGDTGVVFVGWWHEPFRLGMRFCTNRRSALF 281

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNA--- 293
                    + + +    + +PR S +  R +     + +       +   D  +     
Sbjct: 282 YVDLTGGKCELLSDDSMAMCSPRLSPDQCRIVYLRNTNLSPHQQCSQLCLYDWYTKVTSV 341

Query: 294 -----TERL-TNTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                  +L  N   I  +      +S DS ++VF+S    ++ L+ + +       ++ 
Sbjct: 342 VVDVVPRQLEGNFSGIYCNLLPLGCWSADSERVVFDSGLRSRQDLFAVNTQTGSVTSLTA 401

Query: 344 D 344
            
Sbjct: 402 G 402



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 40/154 (25%), Gaps = 29/154 (18%)

Query: 265 FSSNGKRALISVQ------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +S      +                 +    ++ VDL     E L++      S   SPD
Sbjct: 249 WSPGDTGVVFVGWWHEPFRLGMRFCTNRRSALFYVDLTGGKCELLSDDSMAMCSPRLSPD 308

Query: 313 SSQIVFESDREGKE-----QLYVMQ--------SNGSDQKRISQDKEASYFD----PVWS 355
             +IV+  +          QL +                +++  +    Y +      WS
Sbjct: 309 QCRIVYLRNTNLSPHQQCSQLCLYDWYTKVTSVVVDVVPRQLEGNFSGIYCNLLPLGCWS 368

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
              + + F      +  +  +         L   
Sbjct: 369 ADSERVVFDSGLRSRQDLFAVNTQTGSVTSLTAG 402



 Score = 40.4 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 20/119 (16%)

Query: 313 SSQIVFESDREGK------EQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTK 365
             Q +F  D            L V+     +   +    E  S     WSP    + F  
Sbjct: 201 GDQYIFHEDWGENLVSKSIPVLCVLDIESGNISVLEGVPENVSPGQAFWSPGDTGVVFVG 260

Query: 366 FSGEKFAIGV------------MKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSRKKD 411
           +  E F +G+            +   G +  LL +DS  + +P  SP    +++ R  +
Sbjct: 261 WWHEPFRLGMRFCTNRRSALFYVDLTGGKCELLSDDSMAMCSPRLSPDQCRIVYLRNTN 319


>gi|108759643|ref|YP_628770.1| putative lipoprotein [Myxococcus xanthus DK 1622]
 gi|108463523|gb|ABF88708.1| putative lipoprotein [Myxococcus xanthus DK 1622]
          Length = 453

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 58/158 (36%), Gaps = 38/158 (24%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEA----------SYFDPVWSPQGDLIAFT-------KFS 367
           K+ L+V    G  +  +++               +     SP G  +A+          S
Sbjct: 83  KQDLWVRTPAGDSEYALTRTGRVVATRPYGNGLGWSGVAISPDGRQVAYVERPEAQEHES 142

Query: 368 GEKFA-IGVMKKDGSQERL--------LVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGS- 416
             ++A + ++  DGS  R+        L        P  WS  G  + FS +    TG  
Sbjct: 143 PGRWALLWIVNSDGSGRRMLLDLREHALTPGPFRAGPILWSSDGARIAFSLESFARTGPE 202

Query: 417 -------KLYSIDL-NGRNETLINTPAYAS-DPQ-WVG 444
                  +++++++ +G+ E L  +P +    P+ W  
Sbjct: 203 SRPCPLAEVHTVEVGSGKVERLFESPTHGMLTPRGWSA 240



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 43/252 (17%), Positives = 74/252 (29%), Gaps = 60/252 (23%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEP----------RFSPNQQKVAYAT------YD 232
            K  L V    G +   LT +   +   P            SP+ ++VAY        ++
Sbjct: 82  RKQDLWVRTPAGDSEYALTRTGRVVATRPYGNGLGWSGVAISPDGRQVAYVERPEAQEHE 141

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--------FSSNGKRALISV-------- 276
                 +  +        + + + R   L P         +SS+G R   S+        
Sbjct: 142 SPGRWALLWIVNSDGSGRRMLLDLREHALTPGPFRAGPILWSSDGARIAFSLESFARTGP 201

Query: 277 --QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
             +     ++++V++ S   ERL                    FES   G        + 
Sbjct: 202 ESRPCPLAEVHTVEVGSGKVERL--------------------FESPTHGMLTPRGWSAQ 241

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNL 392
           G+    +   +  +         G    F    G  +  A G +  DG    LL      
Sbjct: 242 GTVSFSLLSCEATAEVGK----DGRFFEFEPGRGIRDAHARGAVSSDGVHTLLLPSTPEA 297

Query: 393 QAPTWSPSGRSL 404
             PT    GR +
Sbjct: 298 GVPTALLDGRKV 309


>gi|92112586|ref|YP_572514.1| gluconolactonase [Chromohalobacter salexigens DSM 3043]
 gi|91795676|gb|ABE57815.1| gluconolactonase [Chromohalobacter salexigens DSM 3043]
          Length = 289

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 48/167 (28%), Gaps = 17/167 (10%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
             P     +AH ++D   Q +   K D   R+ F +          +L   D  G     
Sbjct: 84  GGPHVLETLAHPVADRPGQRLNDGKADPEGRLWFGTMDDAERHASGALWRFDAGGL---Q 140

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
              +   +   P  SP+ Q + Y T      +  +   T    + KR+            
Sbjct: 141 TLDTPYTVTNGPAISPDGQTL-YHTDSPARTVYAFTRHTDGTLSDKRVHLRFGEADGY-- 197

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISAS 308
             +G      +  D    ++          R     T    I + AS
Sbjct: 198 -PDG------MTCDTEGGLWIAHWDGGRVTRFRPDGTRDRHIEVPAS 237


>gi|15805855|ref|NP_294553.1| WD repeat-containing protein [Deinococcus radiodurans R1]
 gi|6458546|gb|AAF10408.1|AE001937_4 WD-repeat family protein [Deinococcus radiodurans R1]
          Length = 298

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 71/214 (33%), Gaps = 30/214 (14%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
              R+ L  T            R  +L    S +G+   +       + +++V       
Sbjct: 52  RAGRLELQGTDEGIRGVETSRLRGAVLG-ELSPDGRWLSVLGTGGGYVQLWNVATAERQF 110

Query: 295 ERLTNTL-FINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGS-DQKRISQDKEASYF- 350
             L +     +   A++SPDS ++VF S      +L +  +      K +S  ++  ++ 
Sbjct: 111 TFLAHDKKSYDARLAAFSPDSRRLVFYSY---PNELSLWDTATGVRVKLLSDVRKGGWWT 167

Query: 351 ---DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW---SPSGRSL 404
              D V+SP G     T   G      +          L++  +    ++   SP G   
Sbjct: 168 ADADAVFSPDGKTFVVTGGGGGA---QLFDTRTGD---LLQTFDRPCQSFGPGSPGGFW- 220

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
                     G+   +   +G+N  ++     A 
Sbjct: 221 ---------RGAVGATFSADGKNVAVLYAGGAAR 245



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 60/170 (35%), Gaps = 29/170 (17%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPR---FSPNQQKVAYATYDDEDILRVYLMD 243
           G     + + +   A  ++   + D+  ++ R   FSP+ +++ + +Y +E    + L D
Sbjct: 92  GTGGGYVQLWNVATAERQFTFLAHDKKSYDARLAAFSPDSRRLVFYSYPNE----LSLWD 147

Query: 244 TRIDRAPKRI-----GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           T      K +     G + +      FS +GK  +++     A      D ++    +  
Sbjct: 148 TATGVRVKLLSDVRKGGWWTADADAVFSPDGKTFVVTGGGGGAQ---LFDTRTGDLLQTF 204

Query: 299 NTLFINISA-------------SYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +    +                ++S D   +       G  +LY +   G
Sbjct: 205 DRPCQSFGPGSPGGFWRGAVGATFSADGKNVA-VLYAGGAARLYGVAGAG 253



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 5/96 (5%)

Query: 321 DREGKEQLYVMQSNGSDQ--KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           D  G  +   ++  G+D+  + +   +         SP G  ++     G    +  +  
Sbjct: 46  DSNGWYRAGRLELQGTDEGIRGVETSRLRGAVLGELSPDGRWLSVLGTGGGYVQLWNVAT 105

Query: 379 DGSQERLLVED---SNLQAPTWSPSGRSLIFSRKKD 411
              Q   L  D    + +   +SP  R L+F    +
Sbjct: 106 AERQFTFLAHDKKSYDARLAAFSPDSRRLVFYSYPN 141


>gi|62857357|ref|NP_001017179.1| excision repair cross-complementing rodent repair deficiency,
           complementation group 8 [Xenopus (Silurana) tropicalis]
 gi|89272011|emb|CAJ82208.1| excision repair cross-complementing rodent repair deficiency,
           complementation group 8 [Xenopus (Silurana) tropicalis]
          Length = 399

 Score = 45.4 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 55/185 (29%), Gaps = 14/185 (7%)

Query: 118 KEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
             G D + V + L ++   +    K       S   + H  S +  Q    + G F S  
Sbjct: 61  SGGADGIIVLYDLANLHKSQSYTCKALCKVGKSHPDM-HKFSVETVQWYPHDTGIFTSSS 119

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
              +  +          V   DG             ++    SP   K +      ++  
Sbjct: 120 FDKTLKIWDTNSLKLAEVFHFDGT------------VYSHHMSPLATKHSLIAVGTKNP- 166

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +V L D +   +   +   R  +LA  +S      L +   D  + ++ V   S     L
Sbjct: 167 KVQLCDLKSGSSSHILQGHRGEVLAVCWSPRYDYILATASADSKVKLWDVRKASGCLITL 226

Query: 298 TNTLF 302
                
Sbjct: 227 DQHNG 231


>gi|296414058|ref|XP_002836720.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295631558|emb|CAZ80911.1| unnamed protein product [Tuber melanosporum]
          Length = 1105

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 37/228 (16%), Positives = 77/228 (33%), Gaps = 32/228 (14%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG-------KRALI 274
           N     Y   D    + +  + +                    +S +G       +R   
Sbjct: 386 NGSIFVYNVRDYNGSIPLSHVLSAPASPTT-----SGKSTFITWSPDGYCLFAGYQRGWA 440

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQ 332
           +          S    +   ER     +++   + S+     +I+   +  G E+++VM+
Sbjct: 441 TWSVYGKPGGNSFSADTRLLERNAGEGYLDGVRTGSWVSAGGEIMLVKE-GGDERIWVME 499

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--------R 384
              S          A+   PV      ++ +     +K  I  + ++ S           
Sbjct: 500 FARSAVTG--CFCSANIARPVLQTNEKILIY--RGYDKSDIAAISQETSVLWHHVQMPSV 555

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            LV++  +++   SP GR +  +    G  G   YS++ +GR +T IN
Sbjct: 556 YLVDNWPIRSAVISPDGRYVAIA----GRRGLAHYSVN-SGRWKTFIN 598


>gi|239992380|ref|ZP_04713044.1| protein kinase [Streptomyces roseosporus NRRL 11379]
          Length = 1337

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 45/279 (16%), Positives = 79/279 (28%), Gaps = 30/279 (10%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
            RLWDV+  K  +            + A    D          G  +  + F   +   G
Sbjct: 481 LRLWDVRSGKCPVA-------VQGHEGAVRTVDVSADGRFALSGGGDEVVAFWDLT--EG 531

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                  V   +G             + + R S +   +A  +        ++  + R  
Sbjct: 532 RCLGRAAVPGPEG-------RPAPGAIRQVRLSGDAS-LALCSTSYGK---IFSWEFRAG 580

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           R    +            S +G+ AL S    E   +   DL +     +      +   
Sbjct: 581 RGRAVLAGPEEHGRTLEVSGDGRWALASNGLAENDAVRLWDLSTGQLRHVLRGARFSEPL 640

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+ PD +  V  S  +GK  + +   +     R       +      S  G   A +   
Sbjct: 641 SFGPDGASAV-TSGADGK--ILIWDVDSGTCVRTLGGHSTTASAVSLSSDGRH-AISGGR 696

Query: 368 GEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRS 403
            +      ++  G   R    L  +    AP   P GR 
Sbjct: 697 DKSLRFWELRI-GRCLRTFEGLENEPLAVAP--GPDGRH 732



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 62/189 (32%), Gaps = 11/189 (5%)

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                 +  R     + +      + +   S +G R  ++   D    ++  DL S A  
Sbjct: 818 GRSAVRVGLRSAWPGRALHAHDRHLHSVDVSGDG-RIAVTSGSDRTARLW--DLDSGACI 874

Query: 296 RLTNTLFINISASY--SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
           R+ +    +  AS   S D    V    ++G  +L+  ++      R+            
Sbjct: 875 RVLDGHSHHTVASVRLSADGRY-VLTGCQDGTVRLW--RAADGACLRVLDGHLHGVLWLG 931

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +SP G   A     G    +  ++   +   L            +  GR L+  R    D
Sbjct: 932 FSPDGRS-ALVGAGGNMVRLWDLESARAPMTLEAARGQADTAG-ATDGRRLVAHRGYAAD 989

Query: 414 TGSKLYSID 422
           +  +L+ +D
Sbjct: 990 SV-QLWDLD 997


>gi|260951377|ref|XP_002619985.1| hypothetical protein CLUG_01144 [Clavispora lusitaniae ATCC 42720]
 gi|238847557|gb|EEQ37021.1| hypothetical protein CLUG_01144 [Clavispora lusitaniae ATCC 42720]
          Length = 378

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 60/193 (31%), Gaps = 26/193 (13%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    D+ +     SP+  K+   + D   ++  +  + R  +    +          R
Sbjct: 51  TVLKGHDKTVTSVDISPDGSKILTCSQDRNALVWQWNDEAREFKPTLVLLRINRAAKVCR 110

Query: 265 FSSNGKR---------ALISVQKDEAMDIYSVDLQ---SNATERLTNTLFINISASYSPD 312
           +S NG +           I   ++E     S  L+    +    L+      + AS S D
Sbjct: 111 WSPNGDKFAVGSADRVIAICYYEEENDWWVSKHLKKPLKSTITSLSWHPNNVLLASGSTD 170

Query: 313 SSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--------GDLI 361
               VF +  +G   K +  V    GS     +   + +     W           GD +
Sbjct: 171 GHVRVFSAFIKGLDTKPEPSVW---GSKLPFQTLVGDYTNETGAWVHDVSFNEDGAGDSL 227

Query: 362 AFTKFSGEKFAIG 374
           A+    G    + 
Sbjct: 228 AYVSHDGTVSVVY 240



 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 38/220 (17%), Positives = 75/220 (34%), Gaps = 31/220 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALIS 275
           FSPN   +A      ++ + +Y       + P  I   +     + +   S +G + L +
Sbjct: 19  FSPNFDILAVT---KDNTVELYQNSPGSSKKPTLITVLKGHDKTVTSVDISPDGSKIL-T 74

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFES-DREGKEQLYVM 331
             +D    ++  + ++   +     L IN +A    +SP+  +    S DR      Y  
Sbjct: 75  CSQDRNALVWQWNDEAREFKPTLVLLRINRAAKVCRWSPNGDKFAVGSADRVIAICYYEE 134

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQE------ 383
           +++    K + +  +++     W P   L+A     G    F+  +   D   E      
Sbjct: 135 ENDWWVSKHLKKPLKSTITSLSWHPNNVLLASGSTDGHVRVFSAFIKGLDTKPEPSVWGS 194

Query: 384 ----RLLVEDSNLQAPTWSPS--------GRSLIFSRKKD 411
               + LV D   +   W           G SL +     
Sbjct: 195 KLPFQTLVGDYTNETGAWVHDVSFNEDGAGDSLAYVSHDG 234


>gi|38260650|gb|AAR15466.1| WD-repeat protein [Capsella rubella]
          Length = 458

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 63/197 (31%), Gaps = 11/197 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++ + +   Y          +            +I    + I   R+S + +  L + + 
Sbjct: 55  WALDSE---YILCGLYKKPMIQAWSLTQPEWTCKIDEGPAGISYARWSPDSRHILTTSEF 111

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              + ++S+ L +     +        +S  ++ D       + R+ K+ + ++     +
Sbjct: 112 QLRLTVWSL-LNTACVHVQWPRHGSKGVS--FNQDGKFAAICTRRDCKDYVNLLSCQSWE 168

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQA 394
                        D  WSP    I     S  ++ + +   DG    + +       ++ 
Sbjct: 169 IMGSFAVDTLDLADLEWSPDDSSIV-VWDSPLEYKVLIYSPDGRCLFKYQAYECGLGVKT 227

Query: 395 PTWSPSGRSLIFSRKKD 411
            +WSP G+ L       
Sbjct: 228 VSWSPCGQFLAIGSYDQ 244



 Score = 43.9 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 81/240 (33%), Gaps = 31/240 (12%)

Query: 143 KFFSSPASWRKIA-HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC----VMD 197
           ++ +    +R +   T S  + Q  +        +I ++  ++ S  I   L     +  
Sbjct: 20  RYLAVANDYRLVIRDTFSFQVVQLFS-----CLDKISYIEWALDSEYILCGLYKKPMIQA 74

Query: 198 RDGANIRYLTPSRDQI--LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                  +     +    +   R+SP+ + +   +   E  LR+ +              
Sbjct: 75  WSLTQPEWTCKIDEGPAGISYARWSPDSRHILTTS---EFQLRLTVWSLLNTACVHVQWP 131

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSP 311
                    F+ +GK A I  ++D    +  +  QS     +  +  ++        +SP
Sbjct: 132 RHGSK-GVSFNQDGKFAAICTRRDCKDYVNLLSCQS---WEIMGSFAVDTLDLADLEWSP 187

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFS 367
           D S IV   D   + ++ +   +G   + + + +       V    WSP G  +A   + 
Sbjct: 188 DDSSIV-VWDSPLEYKVLIYSPDG---RCLFKYQAYECGLGVKTVSWSPCGQFLAIGSYD 243


>gi|330975281|gb|EGH75347.1| oligopeptidase B [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 686

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 15/170 (8%)

Query: 262 APRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF- 318
           A   S + +R   S+    DE  ++Y  +L +     L      + S +++ DS  + F 
Sbjct: 132 AFSISPDHQRLAYSLDTSGDEVYELYVKELSTGQISSLPFEN-CDGSMTWANDSQTLFFG 190

Query: 319 ---ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIG 374
              E+ R GK  L+      +  +++  + +  +F   + S     +     S       
Sbjct: 191 ELDETHRPGK--LHRHTLGTASAEQVFDEPDGRFFLHCFRSSSERQLIILLNSKTTSEAW 248

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSP-----SGRSLIFSRKKDGDTGSKLY 419
           V+  D  Q+         +   + P      G    F R         LY
Sbjct: 249 VLDADHPQQAFTCLAPRSEGHEYYPDHGLLDGVWTWFIRSNQSGINFALY 298


>gi|326433069|gb|EGD78639.1| hypothetical protein PTSG_01617 [Salpingoeca sp. ATCC 50818]
          Length = 645

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 58/192 (30%), Gaps = 12/192 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP  Q +A           V + DT             S + +  ++ +G+   I  + 
Sbjct: 182 FSPTGQYLA----AAGRSKSVSVFDTLKRFKRVAKIRCPSPVASISWAPDGQNIAIGHED 237

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             ++ IY++D  +    +       +             F S      ++    S  + Q
Sbjct: 238 ARSIQIYNMD--TREVSQ--TWSHHSAGPCVCAFGPTNAFASCSSADGRVLYFASKEALQ 293

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTW 397
                 +E      V+SP    +           I +       +E  +     + +   
Sbjct: 294 SPTHTWRELRGIQLVFSPDETKLIVAAHDK---RIHIFNLSTFEEEASISTKGAIMSLKL 350

Query: 398 SPSGRSLIFSRK 409
           S  G+ L+ S K
Sbjct: 351 SGDGKFLLVSTK 362



 Score = 37.7 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 37/123 (30%), Gaps = 15/123 (12%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFS 367
           +SP    +       G+ +   +       KR+++ +  +      W+P G  IA     
Sbjct: 182 FSPTGQYLA----AAGRSKSVSVFDTLKRFKRVAKIRCPSPVASISWAPDGQNIAIGHED 237

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP----------SGRSLIFSRKKDGDTGSK 417
                I  M      +      +      + P           GR L F+ K+   + + 
Sbjct: 238 ARSIQIYNMDTREVSQTWSHHSAGPCVCAFGPTNAFASCSSADGRVLYFASKEALQSPTH 297

Query: 418 LYS 420
            + 
Sbjct: 298 TWR 300


>gi|293602959|ref|ZP_06685398.1| CsgG family protein [Achromobacter piechaudii ATCC 43553]
 gi|292818753|gb|EFF77795.1| CsgG family protein [Achromobacter piechaudii ATCC 43553]
          Length = 232

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 50/137 (36%), Gaps = 21/137 (15%)

Query: 3   LRFFIAEELNMKINLCLLLVLIGGFFPTSIH--AFVKVATNSANYSPV-----SIAFTKF 55
           +R    E LN  + +  L VL       +      + V    A   P       I+  KF
Sbjct: 1   MREQEKEMLNKVVKMGALAVLATAISGCATERSQALAVPAVQAASKPYQGVRSPISVGKF 60

Query: 56  V------------SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDW 103
                         +D LGG+   +V   LQRS  F ++ +D+  +     ++    +  
Sbjct: 61  DNRTNYLRGVFSDGVDRLGGQAKTIVISHLQRSGRFQVMDRDNLSE--IAQEAGFNKKAS 118

Query: 104 NSLGAQVLVTGRVIKEG 120
              GA+ +VTG V   G
Sbjct: 119 QIKGARYVVTGDVTAFG 135


>gi|193634160|ref|XP_001949187.1| PREDICTED: probable cytosolic iron-sulfur protein assembly protein
           Ciao1-like isoform 1 [Acyrthosiphon pisum]
          Length = 337

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 40/229 (17%), Positives = 73/229 (31%), Gaps = 15/229 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                 I++   + P  Q +A    D    L  Y    +           +  + A  +S
Sbjct: 11  LKGHSGIVWNTSWHPKGQMLASCGEDKTIRLWNYKDGDKSTLKCLLADGHQRTVRAIAWS 70

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDRE 323
             G+    S   D  + I+  D +S   E    L        S ++S   S +   S R+
Sbjct: 71  YCGQSLA-SASFDATIAIW--DNKSGQFECNATLEGHENEVKSVAWSRSGSMLATCS-RD 126

Query: 324 GKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--- 379
               ++ V + N  +   +           VW P  D++A   +      + +   D   
Sbjct: 127 KSVWVWEVWEDNEYECAAVLNAHSQDVKKVVWHPHEDILASASYDNSV-KLYMEDADKEW 185

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
                L    S + +  +  +G  L+ S     D   K++   L G  E
Sbjct: 186 TCVGTLSSHTSTVWSLAFDKTGDRLVTSSD---DRTLKIWQKYLPGNPE 231


>gi|71021633|ref|XP_761047.1| hypothetical protein UM04900.1 [Ustilago maydis 521]
 gi|74700240|sp|Q4P4R3|HIR1_USTMA RecName: Full=Protein HIR1
 gi|46100611|gb|EAK85844.1| hypothetical protein UM04900.1 [Ustilago maydis 521]
          Length = 1017

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 73/239 (30%), Gaps = 43/239 (17%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR------------IGNF 256
            +   +F     P+  ++A A  D +    + +  T     P+             +   
Sbjct: 18  GKLSTIFSVAVHPDSSRLATAGLDTK----IRIWATATILNPRAENNSNSHRLLSTLSRH 73

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDL----------------QSNATERLTNT 300
              +L  R++++G+    S   D    I+ +D                       RL   
Sbjct: 74  TGSVLVVRWANSGRFLA-SGSDDTVALIWDLDPSGMGGGSFGSSEVNIESWRPYRRLAGH 132

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +  +++ D     F +      ++ V      D+ RI    +      V+ P G  
Sbjct: 133 ESDVVDLAWADDDE---FIATVGLDSKVIVWSGTHFDRLRIIDGHQGFVKGVVFDPLGQY 189

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL------VEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +A T    +   +      G +  +          +  + P+WSP G  L+ +    G 
Sbjct: 190 LA-TASDDKTVKVWRTSDWGLERSITDPFLTSPSTAFFRRPSWSPDGSLLLCANAMSGP 247


>gi|46111239|ref|XP_382677.1| hypothetical protein FG02501.1 [Gibberella zeae PH-1]
          Length = 619

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/210 (14%), Positives = 70/210 (33%), Gaps = 28/210 (13%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---- 264
           + + ++   RFS + + VA             + D +       + +  +  ++      
Sbjct: 313 NHESVVCCVRFSHDGKYVA-----TGCNRSAQIFDVQSGEKVCVLEDHTASDMSADLYIR 367

Query: 265 ---FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFES 320
              FS +G+    +  +D+ + ++  D+Q+       +    +  S  ++ D   I   S
Sbjct: 368 SVCFSPDGRYLA-TGAEDKLIRVW--DIQTRTIRNHFSGHEQDIYSLDFARDGRTIASGS 424

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              G   + +          ++   E        SP    +A          + V     
Sbjct: 425 ---GDRTVRLWDIEQGTNT-LTLTIEDGVTTVAISPDTQFVAAGSLDKS---VRVWDLHS 477

Query: 381 S--QERLLVEDSN---LQAPTWSPSGRSLI 405
               ERL   D +   + +  +SPSG+ L+
Sbjct: 478 GFLVERLEGPDGHKDSVYSVAFSPSGKDLV 507


>gi|313224781|emb|CBY20573.1| unnamed protein product [Oikopleura dioica]
          Length = 296

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 58/194 (29%), Gaps = 18/194 (9%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N +K A    D      + L D    +    I    S + +  FS +G +          
Sbjct: 73  NGKKAASVGMDA----TIRLWDLENAQELAVIEGSPSDMWSICFSPDGTKIATGAT---G 125

Query: 282 MDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            D+   D ++    +  +        +S +YSPD + +      +G   + +  ++  D 
Sbjct: 126 ADVKIYDAETCEEIQTVSAGGKCPFVLSLAYSPDGTLLA-IGGMDG--IITIFSTDNYDT 182

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPT 396
             + +          +S     +      G    I V           +      + +  
Sbjct: 183 FNVIEGHAMPIRSIAFSSDSQFMMSASDDG---HIKVYDASHKNLVGTLSGHSGWVLSVA 239

Query: 397 WSPSGRSLIFSRKK 410
           + P   ++  S  K
Sbjct: 240 FGPDNTAVSCSADK 253


>gi|253741413|gb|EES98283.1| Periodic tryptophan protein 2-like protein [Giardia intestinalis
           ATCC 50581]
          Length = 1173

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 44/139 (31%), Gaps = 26/139 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              P+   +A    D      +YL   R  +  + +      I +  FS  G   L+S  
Sbjct: 659 AVDPSGDIIAAGCSD--GDFEIYLFQLRTSKLLEVLSGHTGPITSLSFSPLGTGELVSSS 716

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINIS----------ASYSPDSSQIVFESDREGKEQ 327
            D    I+S           T +  I             A ++PD  Q++  S   G  +
Sbjct: 717 WDGTTRIWS-----------TFSPSIPCEILPEGVEVLQADFTPDGLQLL-TSASNG--R 762

Query: 328 LYVMQSNGSDQKRISQDKE 346
           + +    G +Q  I     
Sbjct: 763 ITIWSVEGGEQTGIFNVGR 781


>gi|291300328|ref|YP_003511606.1| hypothetical protein Snas_2837 [Stackebrandtia nassauensis DSM
           44728]
 gi|290569548|gb|ADD42513.1| hypothetical protein Snas_2837 [Stackebrandtia nassauensis DSM
           44728]
          Length = 354

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 3/111 (2%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           D + +    D E      +++ +G+++   +S        D   S  G+  A+ +     
Sbjct: 72  DGTFVYLRDDTEDDGAAELVRRDGTEESTVLSVPSSDITGDISVSADGEWAAWERQGNGD 131

Query: 371 FAIGVMKKDGSQER-LLVEDSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLY 419
             I V        + LL   SN   APTW+P G  L+ +   D  TG+  +
Sbjct: 132 TDIMVADLSTGDTKKLLSHSSNSCVAPTWAPDGAPLLLTPDPDSSTGAVRW 182



 Score = 43.1 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 41/110 (37%), Gaps = 5/110 (4%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYA 229
           GDF+   +++ +            ++ RDG     +       I  +   S + +  A+ 
Sbjct: 69  GDFDGTFVYLRDDTEDDGAAE---LVRRDGTEESTVLSVPSSDITGDISVSADGEWAAWE 125

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
              + D   + + D       K + +  +  +AP ++ +G   L++   D
Sbjct: 126 RQGNGDT-DIMVADLSTGDTKKLLSHSSNSCVAPTWAPDGAPLLLTPDPD 174



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 2/93 (2%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIVFESDREGK 325
           +G    +    ++      V         + +    +I+   S S D     +E    G 
Sbjct: 72  DGTFVYLRDDTEDDGAAELVRRDGTEESTVLSVPSSDITGDISVSADGEWAAWERQGNGD 131

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             + V   +  D K++      S   P W+P G
Sbjct: 132 TDIMVADLSTGDTKKLLSHSSNSCVAPTWAPDG 164


>gi|190347413|gb|EDK39674.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 398

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 53/133 (39%), Gaps = 20/133 (15%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP--- 263
                +++    FSP+ + V  +++D+        +          IG FR  + AP   
Sbjct: 281 MTGHQKLVNHVSFSPDGRYVVSSSFDNS-------IKLWDGIKGTFIGTFRGHV-APVYQ 332

Query: 264 -RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD 321
             +S +  R L+S  KD  + ++  D+++      L        +  +S D  ++     
Sbjct: 333 TAWSPD-SRLLVSCSKDTTLKVW--DVRTRKLSVDLPGHADEVYAVDWSMDGKRVA---- 385

Query: 322 REGKEQLYVMQSN 334
             GK+++  + S+
Sbjct: 386 SGGKDKMVRIWSS 398



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 6/130 (4%)

Query: 234 EDILRVYLMDTRIDRAPK-RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
            D   +YL +      P  R+   + ++    FS +G+  ++S   D ++ ++   ++  
Sbjct: 261 SDDFTMYLWEPLKSSKPVCRMTGHQKLVNHVSFSPDGRY-VVSSSFDNSIKLWD-GIKGT 318

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                   +      ++SPDS  +V  S       L V                   +  
Sbjct: 319 FIGTFRGHVAPVYQTAWSPDSRLLVSCSK---DTTLKVWDVRTRKLSVDLPGHADEVYAV 375

Query: 353 VWSPQGDLIA 362
            WS  G  +A
Sbjct: 376 DWSMDGKRVA 385



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 47/153 (30%), Gaps = 11/153 (7%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
           +  L++   D  M ++     S    R+T    +    S+SPD   +V  S       + 
Sbjct: 254 RERLVTASDDFTMYLWEPLKSSKPVCRMTGHQKLVNHVSFSPDGRYVVSSSF---DNSIK 310

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +            +   A  +   WSP   L+           + V      +  + +  
Sbjct: 311 LWDGIKGTFIGTFRGHVAPVYQTAWSPDSRLLVSCSKDTT---LKVWDVRTRKLSVDLPG 367

Query: 390 SNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYS 420
              +     WS  G+ +        D   +++S
Sbjct: 368 HADEVYAVDWSMDGKRVA---SGGKDKMVRIWS 397



 Score = 36.5 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 5/105 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             VVS    NS+ + D                +++  +SP+ + +   + D      + +
Sbjct: 298 RYVVSSSFDNSIKLWDGIKGTFIGTFRGHVAPVYQTAWSPDSRLLVSCSKDT----TLKV 353

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            D R  +    +      + A  +S +GKR   S  KD+ + I+S
Sbjct: 354 WDVRTRKLSVDLPGHADEVYAVDWSMDGKRVA-SGGKDKMVRIWS 397


>gi|302804737|ref|XP_002984120.1| hypothetical protein SELMODRAFT_119723 [Selaginella moellendorffii]
 gi|300147969|gb|EFJ14630.1| hypothetical protein SELMODRAFT_119723 [Selaginella moellendorffii]
          Length = 318

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 66/209 (31%), Gaps = 21/209 (10%)

Query: 162 IYQSITGEKGDFNS-RILFVSESVV---SGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
           +Y   T  KG   + R +  + S     S      + V D +     +        +   
Sbjct: 110 VYAKSTVIKGHSGTVRSIAFNPSGEYLLSASDDKCMKVWDVETEKFAFALLGHLNWVRSA 169

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+ + + +   + D      + L D    +   +  +   M+ + RF   GK    S  
Sbjct: 170 EFNNDGRSIVSGSDDR----TIRLWDVESRQCIHQYIDILGMVRSARFHPEGKCIA-SCG 224

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQS 333
            DE + I+     + + +RL      +       S+ P    ++   D  G   L +   
Sbjct: 225 TDECIQIW----DTRS-KRLVQHYAADTGTVNTVSFHPSGDYLLSTCDDGG---LRLWDL 276

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                  + +  E S     +   GD  A
Sbjct: 277 REGQLLYMLKGHEGSTNCAEFCKSGDFFA 305



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 68/187 (36%), Gaps = 17/187 (9%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V L   R+      I      + +  F+ +G+  L S   D+ M ++ V+ +      L 
Sbjct: 103 VRLWIPRVYAKSTVIKGHSGTVRSIAFNPSGEYLL-SASDDKCMKVWDVETE-KFAFALL 160

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             L    SA ++ D   IV  SD      + +             D         + P+G
Sbjct: 161 GHLNWVRSAEFNNDGRSIVSGSD---DRTIRLWDVESRQCIHQYIDILGMVRSARFHPEG 217

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             IA +  + E   I     D   +RL+     +   +   ++ PSG  L+ S   DG  
Sbjct: 218 KCIA-SCGTDECIQIW----DTRSKRLVQHYAADTGTVNTVSFHPSGDYLL-STCDDG-- 269

Query: 415 GSKLYSI 421
           G +L+ +
Sbjct: 270 GLRLWDL 276


>gi|298712691|emb|CBJ48716.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 1172

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 67/176 (38%), Gaps = 8/176 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           +++ +G   +S+ V      N++     +   ++   +S + +++A  +        V++
Sbjct: 142 DTLATGSYGSSVKVWHVPTMNLKATLSGQTGAIYCVAWSLDGKRIASTS----GKGAVWI 197

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D    +  ++I    S     ++       L SV  D+ + I+S         R+    
Sbjct: 198 WDVGSRKVERQIRLHVSAAHRVQWDPFQPGRLASVSADKTLVIFS---DKGTVYRVYTHP 254

Query: 302 FINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSP 356
                 ++ P    ++    ++GK +++    +NG + + +        F   WSP
Sbjct: 255 DALFGCNWCPTHENVIATGCKDGKVRVFDCSWTNGLEPQYVLSGHAQRVFHVCWSP 310


>gi|281209658|gb|EFA83826.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 509

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 15/121 (12%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---P 263
                Q +    FSPN +  A A++D      + L D +  +    +GNFR  + A    
Sbjct: 392 LTGHQQQINLVSFSPNGRYFASASFDK----SIKLWDGQTGKF---LGNFRGHVGAVYQV 444

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFES-D 321
            +SS+  R L+S  KD  + I+  D+++      L        +  +SP+   +V  S D
Sbjct: 445 CWSSD-SRFLVSGSKDSTLKIW--DIKTKKMTLELPGHADEVYTVDWSPNGENVVSGSKD 501

Query: 322 R 322
           R
Sbjct: 502 R 502



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 24/196 (12%), Positives = 58/196 (29%), Gaps = 23/196 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +    FSP+   +A  + D      + L D              + +L   +S
Sbjct: 135 LEGHTEAVLHSAFSPDGTGLASVSGDT----TLRLWDLNTQTPSFTCKGHTNWVLQVAWS 190

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT-------ERLTNTLFINISAS-YSPDSSQIVF 318
            +GK+   +   +  + I++  L             +    L         +P   ++  
Sbjct: 191 PDGKKIA-TGGMEGDIRIWN-PLTGKQVGSTLKGHTKFITGLAW--EPFHLNPKCVRLA- 245

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S ++   +++   +  +           S     WS  G+ + +T        I V   
Sbjct: 246 SSSKDATVKIW--DTESNHCLMTLSGHTMSVTCLKWS--GESMIYTGSQDRT--IRVYNT 299

Query: 379 DGSQERLLVEDSNLQA 394
           +  +   ++E      
Sbjct: 300 NEGKLIRVLEGHAHWV 315



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 39/120 (32%), Gaps = 4/120 (3%)

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            +     T + R    +      +L   FS +G     SV  D  + ++ ++ Q+ +   
Sbjct: 119 PQAVFRVTPVTRCSSSLEGHTEAVLHSAFSPDGTGLA-SVSGDTTLRLWDLNTQTPSFT- 176

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                   +  ++SPD  +I      EG  +++     G       +          W P
Sbjct: 177 CKGHTNWVLQVAWSPDGKKIA-TGGMEGDIRIWN-PLTGKQVGSTLKGHTKFITGLAWEP 234



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 7/129 (5%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA- 293
           D   +    +    A  R+   +  I    FS NG+    S   D+++ ++  D Q+   
Sbjct: 374 DFTVIMWNPSVSKTAISRLTGHQQQINLVSFSPNGRYFA-SASFDKSIKLW--DGQTGKF 430

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
                  +       +S DS  +V  S       L +                   +   
Sbjct: 431 LGNFRGHVGAVYQVCWSSDSRFLVSGSK---DSTLKIWDIKTKKMTLELPGHADEVYTVD 487

Query: 354 WSPQGDLIA 362
           WSP G+ + 
Sbjct: 488 WSPNGENVV 496



 Score = 39.6 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 80/268 (29%), Gaps = 41/268 (15%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     +L + D +     +        + +  +SP+ +K+A  T   E  +R++   T 
Sbjct: 156 SVSGDTTLRLWDLNTQTPSFTCKGHTNWVLQVAWSPDGKKIA--TGGMEGDIRIWNPLTG 213

Query: 246 IDRAPKRIGNFR---SMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNT 300
                   G+ +    +   P   +    R   S  KD  + I+  D +SN     L+  
Sbjct: 214 KQVGSTLKGHTKFITGLAWEPFHLNPKCVRLA-SSSKDATVKIW--DTESNHCLMTLSGH 270

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   +S     +++   ++    + V  +N     R+ +           +     
Sbjct: 271 TMSVTCLKWS--GESMIYTGSQD--RTIRVYNTNEGKLIRVLEGHAHWVNTLALNTD--- 323

Query: 361 IAFTKFSG--------------------EKFAIGVMKKD--GSQERLLVEDSNLQAPTWS 398
             +   +G                    E++          G  + L+    +     W+
Sbjct: 324 --YVLRTGPFDHTGEHQETLEKAQQKALERYNEAKASGAKYGGGDILISGSDDFTVIMWN 381

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           PS      SR         L S   NGR
Sbjct: 382 PSVSKTAISRLTGHQQQINLVSFSPNGR 409


>gi|271964021|ref|YP_003338217.1| hypothetical protein Sros_2498 [Streptosporangium roseum DSM 43021]
 gi|270507196|gb|ACZ85474.1| hypothetical protein Sros_2498 [Streptosporangium roseum DSM 43021]
          Length = 296

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 15/150 (10%)

Query: 267 SNGKRALI--SVQKDEAMDIYSVDL--QSNATERLTNTLFINISASYSPDSSQIVFESDR 322
             G  A+   +        +   DL   +    +  +   +   A ++ +  + V    R
Sbjct: 66  PKGGMAVAVPTSYTGGRDSVLLADLVANNGTKIQTVDKPLVAKFAHWTRNGGKAVLTVQR 125

Query: 323 EGK-----EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           +           V+ +     +R++           WSP G  +      G +F      
Sbjct: 126 KNGAAWETTGFVVVDATAKTARRVNVTGVDRTARFRWSPDGADVVAAYQGGTRF----YG 181

Query: 378 KDGSQERLLVEDS--NLQAPTWSPSGRSLI 405
           +DG+  R L++          +SPSG++L+
Sbjct: 182 QDGAVRRTLLKTGIPAGGEDVFSPSGKALM 211


>gi|293335549|ref|NP_001167711.1| hypothetical protein LOC100381399 [Zea mays]
 gi|223943557|gb|ACN25862.1| unknown [Zea mays]
          Length = 429

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 66/199 (33%), Gaps = 24/199 (12%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-MILAPRFSSNGKRALISVQ 277
           FS + + +A  + D +    + +   R  +  +R+    S  + +  FS +G + L S  
Sbjct: 188 FSRDSEMLASGSQDGK----IKVWRIRTGQCLRRLERAHSKGVTSVTFSRDGTQIL-STS 242

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D    ++ +       +           A ++ D S+++  S       + V  +  +D
Sbjct: 243 FDTTARVHGL-KSGKMLKEFRGHSSYVNYAIFTTDGSRVITASS---DCTVKVWDTKTTD 298

Query: 338 ------QKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--- 387
                      +  +AS       P   D I     +     I +M   G   +      
Sbjct: 299 CLHTFKPPPPLRGGDASVNSVHLFPKNTDHIVVCNKTSS---IFIMTLQGQVVKSFSSGK 355

Query: 388 -EDSNLQAPTWSPSGRSLI 405
            E  +  A + SP G  + 
Sbjct: 356 REGGDFVAASVSPKGEWIY 374



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--------FRSMILAPRFSSNG 269
           RFSP+ Q +   + D      + + D    +  K +              +L   FS + 
Sbjct: 137 RFSPDGQYLVSCSVDG----IIEVWDYLSGKLKKDLQYQADESFMMHEEPVLCVDFSRDS 192

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQL 328
           +    S  +D  + ++ +        RL         S ++S D +QI+  S        
Sbjct: 193 EMLA-SGSQDGKIKVWRI-RTGQCLRRLERAHSKGVTSVTFSRDGTQILSTSF---DTTA 247

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            V         +  +   +     +++  G  +      
Sbjct: 248 RVHGLKSGKMLKEFRGHSSYVNYAIFTTDGSRVITASSD 286


>gi|168820080|ref|ZP_02832080.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205343103|gb|EDZ29867.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320085052|emb|CBY94839.1| putative isomerase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 331

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 32/235 (13%), Positives = 72/235 (30%), Gaps = 18/235 (7%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 2   KQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 61

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPD-SSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
            Y +     A         +  S +  S D   + VF  S   G   + V +        
Sbjct: 62  AYRIAPDDGALT-FAAESALPGSPTHISTDHHGRFVFVGSYNAGN--VSVTRLQDGLPVE 118

Query: 341 ISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNL 392
           +    E          +P    +       ++  +  +  DG        E   VE +  
Sbjct: 119 LVDVVEGLDGCHSANITPDNRTLWVPALKQDRICLFTLSDDGHLVAQEPAEVNTVEGAGP 178

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
           +   + P+ R   +   +   +       + +G  E   TL   PA  SD +W  
Sbjct: 179 RHMVFHPN-RQYAYCVNELNSSVDVWQLKNPHGEIECVQTLDMMPADFSDTRWAA 232


>gi|86742102|ref|YP_482502.1| WD-40 repeat-containing serine/threonin protein kinase [Frankia sp.
           CcI3]
 gi|86568964|gb|ABD12773.1| serine/threonine protein kinase with WD40 repeats [Frankia sp.
           CcI3]
          Length = 898

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 30/209 (14%), Positives = 71/209 (33%), Gaps = 17/209 (8%)

Query: 224 QKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +++A A Y  E          +        P  I      +LA   S +G     +   +
Sbjct: 526 RRLALAAYRAEPHSARTRSAMIALFGAGITPTTIPVGTGALLALAVSPDGHWIA-AGSNN 584

Query: 280 EAMDIYSVDLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
             + ++ V +      R T+    +     S +++ D   +      +G  +L+ +    
Sbjct: 585 GTVTLWEV-VGRTELVRRTSVSVPSRSWIESLAFNRDGGLLA-AGHSDGTIRLWNLHDPD 642

Query: 336 SDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNL 392
              +  + Q    +     +SP  + +      G      V      ++R+  +     +
Sbjct: 643 QMVRWSTIQAHTDAVQSVAFSPDSNTLGSASADGIVALWDVTDPARPKQRVRADGQTGGV 702

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           ++  ++P+G  L F+     D    L++I
Sbjct: 703 RSMAFAPNGTLLAFA---GEDGTVHLWNI 728



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 82/236 (34%), Gaps = 8/236 (3%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLT-PSRDQILFEPRFSPNQQKVAYATYDDE 234
           R+   +        +    ++   GA I   T P     L     SP+   +A  + +  
Sbjct: 527 RLALAAYRAEPHSARTRSAMIALFGAGITPTTIPVGTGALLALAVSPDGHWIAAGSNNGT 586

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             L   +  T + R        RS I +  F+ +G     +   D  + ++++       
Sbjct: 587 VTLWEVVGRTELVRRTSVSVPSRSWIESLAFNRDGGLLA-AGHSDGTIRLWNLHDPDQMV 645

Query: 295 ERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE-ASYFD 351
              T     +   S ++SPDS+ +   S  +G   L+ +      ++R+  D +      
Sbjct: 646 RWSTIQAHTDAVQSVAFSPDSNTLGSAS-ADGIVALWDVTDPARPKQRVRADGQTGGVRS 704

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQAPTWSPSGRSLI 405
             ++P G L+AF    G      +       +   L      +++  ++  G  L+
Sbjct: 705 MAFAPNGTLLAFAGEDGTVHLWNIRDAARPTAGGILRGHSRGVRSVVFTGDGGVLV 760


>gi|75675111|ref|YP_317532.1| WD-40 repeat-containing protein [Nitrobacter winogradskyi Nb-255]
 gi|74419981|gb|ABA04180.1| WD-40 repeat-containing protein [Nitrobacter winogradskyi Nb-255]
          Length = 337

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 81/205 (39%), Gaps = 22/205 (10%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +        K         +    S +GKR +      +   + ++D++  ++  +T+ 
Sbjct: 45  TVTLVSGDGEKAAVTVHGGAILSAVS-DGKRIV---TGGDDGKVVALDMKGESSVLVTDA 100

Query: 301 --LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              +I+ + +  PD + + + +     +  YV    G ++   S D  +S     ++P+G
Sbjct: 101 KRRWID-NIAVHPDGT-LAWSA----GKTAYVRGIKGEEK---SIDAPSSVGGLAFAPKG 151

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +A   ++G   ++       + ERL    S+L   T+SP GR LI S  +    G +L
Sbjct: 152 MRLALAHYNG--VSLWFPNMKAAPERLEWAGSHLGV-TFSPDGRFLITSMHEPALHGWRL 208

Query: 419 YSIDLNGRNETLINTPAYASDPQWV 443
             +    ++  +   P+      W 
Sbjct: 209 VDV----QHMQMTGYPSRVKSLSWG 229


>gi|47219029|emb|CAG00168.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 714

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 46/265 (17%), Positives = 86/265 (32%), Gaps = 32/265 (12%)

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR----FSPNQQKVAYATYDD 233
           +F      S        VM RD      +T  R+  L  P     FS N Q++A      
Sbjct: 228 VFCHSGPTSKFRHIQGAVMHRDTH----ITNVRNLNLTTPGECDGFSVNCQRMAVPLSIS 283

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSS-NGKRALISVQKDEAMDIYSVDLQ 290
              + ++            +   ++   ++   +   +  R  ++   D  + ++ V  +
Sbjct: 284 GGQIAIFERSQPGRLPDGALPTIQNAVNVVDFCWDPFDTHRLAVAGD-DAKIRVWRVP-E 341

Query: 291 SNATERLTNTLFI-------NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
               E LT    I         S  + P +S ++  S  +   +L+    +  D+ ++  
Sbjct: 342 GGLKETLTEPELILQGHTEKIYSIRFHPLASGLLVSSSYDFTVRLW--NLDSGDEVKVLT 399

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-----PTWS 398
                 F   WSP G L+A     G    + +          L E    +        W+
Sbjct: 400 GHHEQIFGMAWSPDGRLLATVCKDG---KVRIYDP-RKSPAPLQEGPGPEGHRGARVVWA 455

Query: 399 PSGRSLIFSR-KKDGDTGSKLYSID 422
             G+ L+ S      + G  LY  D
Sbjct: 456 CEGKYLLVSGFDSRSERGVYLYPAD 480


>gi|331013123|gb|EGH93179.1| protease II [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 686

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 37/270 (13%), Positives = 79/270 (29%), Gaps = 49/270 (18%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I ++       +   + +   +      ++  C    D +N   +  SR+++L +P    
Sbjct: 66  ILETDLSLPSPWGPYLYYTRTTQGDEYARHYRCPRPADDSN--TVDESREELLLDPNAMA 123

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--QKD 279
           +                                     + A   S + +R   S+    D
Sbjct: 124 DGGFF--------------------------------SLGAFSISPDHQRLAYSLDTSGD 151

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF----ESDREGKEQLYVMQSNG 335
           E   +Y  +L +     L      + S +++ DS  + F    E+ R G  +L+      
Sbjct: 152 EVYQLYVKELSTGQISSLPF-EDCDGSMTWANDSQTLFFGELDETHRPG--RLHRHTLGN 208

Query: 336 SDQKRISQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           +  + +  + +  +F   + S     +     S       V+  D  Q+         + 
Sbjct: 209 ASAELVFDEPDGRFFLHCFRSSSERQLIILLNSKTTSEAWVLDADHPQQTFTCLAPRSEG 268

Query: 395 PTWSP-----SGRSLIFSRKKDGDTGSKLY 419
             + P      G    F R         LY
Sbjct: 269 HEYYPDHGLLDGVWSWFIRSNQSGINFALY 298


>gi|86142469|ref|ZP_01060979.1| Dipeptidyl aminopeptidase [Leeuwenhoekiella blandensis MED217]
 gi|85831221|gb|EAQ49678.1| Dipeptidyl aminopeptidase [Leeuwenhoekiella blandensis MED217]
          Length = 748

 Score = 45.4 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 51/395 (12%), Positives = 117/395 (29%), Gaps = 84/395 (21%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
              VT    ++G+D+L +++      + ++I       +P+     A  I+D        
Sbjct: 53  DAFVTIEQTEDGQDQL-IKYE--SKSNAQEIFLSAEALTPSG-EDQALQIAD------FS 102

Query: 169 EKGDFNSRILFV-SESVVSGIIKNSLCVMDRDGANIRYLTPS-RDQILFEPRFSPNQQKV 226
              D +  ++F  +  V     K    V D D   ++ L  +     L   +FS + + V
Sbjct: 103 LSNDESKVLIFTNTSRVWRSNTKGDYWVYDLDTKALKQLGAALPSSSLMFAKFSDSNEHV 162

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL----------------APRFSSNGK 270
           AY +        +Y  + +     +   +    I+                  R++ +GK
Sbjct: 163 AYVS-----GFNLYEENFKTGEVTQLTTDGTGDIINGTFDWVYEEEFGARDGFRWNPDGK 217

Query: 271 RALIS-VQKDEAMDIYSVD-LQSNATERLT-NTLFINISAS---------------YSPD 312
                 +        Y ++   S   + +      +    S               + P 
Sbjct: 218 HIAYWQLDASGIGTFYMINTTDSVYAKPIPLQYPKVGYDPSSTKVGIVNTKTKETTWIPV 277

Query: 313 SSQIV--------FE----------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
               V        +           + ++   ++Y    +    K +  + E ++ D  +
Sbjct: 278 PGDPVQHYLPALQWIDEDLLLIQQLNRKQNTLKIYTYVPSSKALKEVYTETEETWVDLDY 337

Query: 355 ---------------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
                          +P          +     I  +  +  + +LL       A  ++ 
Sbjct: 338 PDVSANQWGKNDLLLTPDKSEFLRMTENDAWRHIYKVSLETGERKLLTPGDYDVAAFYTA 397

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           + + + FS   +      L+S  L G+      TP
Sbjct: 398 TNKEVFFSASPEDPAQRYLFSTSLKGKGTPKRLTP 432



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 41/104 (39%), Gaps = 4/104 (3%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +    L   + D    IY V L++   + LT     +++A Y+  + ++ F +  E   
Sbjct: 354 PDKSEFLRMTENDAWRHIYKVSLETGERKLLTPG-DYDVAAFYTATNKEVFFSASPEDPA 412

Query: 327 QLYVMQSN---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           Q Y+  ++       KR++ ++         +P G     +  S
Sbjct: 413 QRYLFSTSLKGKGTPKRLTPEEFEGINTYQIAPNGKYAIHSHTS 456



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 28/214 (13%), Positives = 63/214 (29%), Gaps = 55/214 (25%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y +  R +      +  +    A+ T +  +  +  L+        + I      + A  
Sbjct: 34  YSSEFRGESARSISWIHDGD--AFVTIEQTEDGQDQLIKYESKSNAQEI-----FLSAEA 86

Query: 265 FSSNGK----RAL-ISVQKDEAMDI-----------------YSVDLQSNATERLTNTLF 302
            + +G+    +    S+  DE+  +                 +  DL + A ++L     
Sbjct: 87  LTPSGEDQALQIADFSLSNDESKVLIFTNTSRVWRSNTKGDYWVYDLDTKALKQL--GAA 144

Query: 303 INIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP------ 352
           +  S    A +S  +  + + S       LY       +  +++ D      +       
Sbjct: 145 LPSSSLMFAKFSDSNEHVAYVS----GFNLYEENFKTGEVTQLTTDGTGDIINGTFDWVY 200

Query: 353 ----------VWSPQGDLIAFTKFSGEKFAIGVM 376
                      W+P G  IA+ +          M
Sbjct: 201 EEEFGARDGFRWNPDGKHIAYWQLDASGIGTFYM 234



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 29/150 (19%)

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +  V+ S+ +G    +V   +    K++ +    +S     +S   + +A+       F 
Sbjct: 116 TSRVWRSNTKG--DYWVYDLDTKALKQLGAALPSSSLMFAKFSDSNEHVAYVS----GFN 169

Query: 373 IGVMKKDGSQERLLVEDSN------------------LQAPTWSPSGRSLIFSRKKDGDT 414
           +        +   L  D                         W+P G+ + + +      
Sbjct: 170 LYEENFKTGEVTQLTTDGTGDIINGTFDWVYEEEFGARDGFRWNPDGKHIAYWQLDASGI 229

Query: 415 GSKLYSIDLNGR---NETLINTPAYASDPQ 441
           G+  Y I+           +  P    DP 
Sbjct: 230 GTF-YMINTTDSVYAKPIPLQYPKVGYDPS 258


>gi|325003407|ref|ZP_08124519.1| peptide hydrolase [Pseudonocardia sp. P1]
          Length = 633

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/209 (11%), Positives = 60/209 (28%), Gaps = 13/209 (6%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             +    + L + DRD  +      SRD        S + + + + +    +    ++  
Sbjct: 57  GSNRSGTHELWLWDRD-EDTFQQATSRDAGTEHGELSADGEWLWWFSDTGGNEFGRWVRQ 115

Query: 244 TRIDRAPKRIGNFRSMILAPRFS----SNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                    +       +A   +      G  A+ ++   E + ++         E + +
Sbjct: 116 PFGGGEAHDVAPEAGDGIASGLALGHGPKGPVAVFALAVQEGIRVWR-QFDGQPAEAIYH 174

Query: 300 TLFINISASYSPDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDP---V 353
                +S   S D++++       G      + V+     D   +    E     P    
Sbjct: 175 HDQDGMSGPLSADATRVAIRHSEHGDASTPGIRVLDVATGDS-LVEMRDEGRLLCPLGFA 233

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            +P    +        +  + +   D  +
Sbjct: 234 PAPDDARLLVRHERYGRDELLLWDTDTGE 262



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 80/253 (31%), Gaps = 17/253 (6%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
           AH ++ +    I       +     V+   ++      +     DG     +       +
Sbjct: 122 AHDVAPEAGDGIASGLALGHGPKGPVAVFALAVQEGIRVW-RQFDGQPAEAIYHHDQDGM 180

Query: 215 FEPRFSPNQQKVAYATYDDEDI--LRVYLMDTRIDRAPKRIGNFRSMI----LAPRFSSN 268
             P  S +  +VA    +  D     + ++D     +   + +   ++     AP    +
Sbjct: 181 SGP-LSADATRVAIRHSEHGDASTPGIRVLDVATGDSLVEMRDEGRLLCPLGFAPA--PD 237

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
             R L+  ++    ++   D  +     +T  L   + A +  D+  +       G+  L
Sbjct: 238 DARLLVRHERYGRDELLLWDTDTGEQCEITIDLPGQLDAIWL-DADNLAVRHTHHGRATL 296

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
              + +GS+  +I  D E         P G L      S     +     +  Q   L+ 
Sbjct: 297 QRCRLDGSELTQIGPD-EGCVLGVARRPDGALEYTWTSSQTATRVYRWSPE--QGATLMF 353

Query: 389 DSNLQAPTWSPSG 401
             +  AP   P G
Sbjct: 354 PDDEHAP---PDG 363


>gi|320108777|ref|YP_004184367.1| hypothetical protein AciPR4_3620 [Terriglobus saanensis SP1PR4]
 gi|319927298|gb|ADV84373.1| hypothetical protein AciPR4_3620 [Terriglobus saanensis SP1PR4]
          Length = 786

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 48/303 (15%), Positives = 91/303 (30%), Gaps = 70/303 (23%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYD----------------------------DE 234
            R+  P  D      +FSP+ +     T                                
Sbjct: 42  QRFTDPYPDLSRNVTKFSPDGKSFFVVTTRGLVDKNLLQSTIWLFDVKAEQAFLAGDARS 101

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD-IYSVDLQSNA 293
                 ++ TR         + ++ IL+PR+S++G+  L   +  +A   +Y +DL++  
Sbjct: 102 PAPAPTVLVTRSGANDSEQQDLQAAILSPRWSADGRSLLFLGRNGDATWRLYRLDLKNKR 161

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
            ++L+      I  +Y      + +      +   +     G+ Q   S         P 
Sbjct: 162 LQQLSTDNQNVI--TYQEKGQIVAYAVSVPWQAIPFPRVVVGTGQSLHSLMFP--DKRPS 217

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI-------- 405
           +  Q +L  +   +       VM     +   L         +  P GR  I        
Sbjct: 218 YPNQNELWLYAHGNVHP----VMDPLSQETVRLNTHYGDTILSVDPDGRYAIVAMAVSAV 273

Query: 406 ---FSRKKDGDTGSKLYS--------------------IDL-NGRNETLINTPAYASDPQ 441
              ++  + G T  ++                      +DL  GR   L++ P    D  
Sbjct: 274 PEAWTNYEPGSTTGRIMVWPPERLKQAYGTDIPESFLLVDLKTGRTSRLLDAP-LGRDAN 332

Query: 442 WVG 444
           WVG
Sbjct: 333 WVG 335


>gi|299768256|ref|YP_003730282.1| hypothetical protein AOLE_00030 [Acinetobacter sp. DR1]
 gi|298698344|gb|ADI88909.1| hypothetical protein AOLE_00030 [Acinetobacter sp. DR1]
          Length = 308

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 40/257 (15%), Positives = 89/257 (34%), Gaps = 25/257 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL--RVYLMDTRIDRAPKRIGNFR 257
           G+ +   +  +      P F     K+ +  Y D D    ++YL +    +      N++
Sbjct: 10  GSIVFVTSVFQLHAATVPTF---YGKLVFHRYSDYDAWDSKLYLYNFTTQQTTLLGTNWK 66

Query: 258 -SMILAPRFSSNGKRALISVQKDE-----AMDIYSVDLQSNATE-RLTNTLF-INISASY 309
              ++   FS +GK               A D+Y+  + S+     LT      +    +
Sbjct: 67  IDHMMNGHFSPDGKWLTFMGVNSGQHYGDAWDVYAWKVGSSELPINLTQGNNKRDEDPKF 126

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSG 368
             D+ +I+F    +    L +++        ++Q+  +     P        I + K +G
Sbjct: 127 I-DNQRIIF----KQNGDLKIVKMTDRTITSVTQNGWDIEESMPYPMVNTTQILYAKGAG 181

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGRN 427
               +  + + G+ +  L   ++     W   G   ++ R         ++Y  D+  + 
Sbjct: 182 NNSRVFSIDQSGAYDTQLTNIASYYPVWW--QGSQFLYVRWYSSTNAHDQIYLYDIANKQ 239

Query: 428 ETLINTPA---YASDPQ 441
            T +   +     SDP 
Sbjct: 240 TTRLPFNSINYDTSDPA 256


>gi|218438895|ref|YP_002377224.1| hypothetical protein PCC7424_1925 [Cyanothece sp. PCC 7424]
 gi|218171623|gb|ACK70356.1| conserved hypothetical protein [Cyanothece sp. PCC 7424]
          Length = 507

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/263 (12%), Positives = 89/263 (33%), Gaps = 36/263 (13%)

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN------------IRYLTPSRDQILFE 216
            +GD      F   + V GI +  L  +   G N            +  +  +++   ++
Sbjct: 197 PQGDKILFAAFDPSAGVEGINQQQLYTVT-TGLNFLVSGDSEPVGRLERILDAKEYKNWQ 255

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
              S N Q +     +  +     L     +  P+ +G   +  +    S +G+   +S 
Sbjct: 256 FDLSDNGQTLVVQRENHRNPGDAGLWVIPQEGKPRPLGLQANDFI---VSPDGQTIAVS- 311

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNG 335
            +D+ + I  ++ Q+ + +             +S D  Q +    +      L+++   G
Sbjct: 312 -QDQGVAIIPLNPQAGSPQ---FFQGYEKIVGFSKDGKQKLLVKINPNFTRSLFLVNQEG 367

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAF------TKFSGEKFA----IGVMKKDGSQ--E 383
             Q+              + P+ +   +       + +  ++     + ++  +  +   
Sbjct: 368 KGQQL--FQTNNPIIGCKFEPREEKTLYCLKTDLVEQAEGQYREEPFLSIVDLETGKDLP 425

Query: 384 RLLVEDSNLQAPTWSPSGRSLIF 406
            L + +      + SP G +L+F
Sbjct: 426 FLALPNYRDVQMSMSPDGVALLF 448


>gi|83592204|ref|YP_425956.1| peptidase C14, caspase catalytic subunit p20 [Rhodospirillum rubrum
           ATCC 11170]
 gi|83575118|gb|ABC21669.1| peptidase C14, caspase catalytic subunit p20 [Rhodospirillum rubrum
           ATCC 11170]
          Length = 1106

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 61/175 (34%), Gaps = 15/175 (8%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           G          +  L+    SP+  K     Y     +    +YL+D +  +   RI   
Sbjct: 99  GGVPVPQGDGLEGSLYTVSLSPDGSKALVAGYTAQSWDGSPSLYLIDVKAQKLQFRIKGL 158

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPD 312
            +++ + R  S+GK  + +        I   D  +     L            S +++ D
Sbjct: 159 PAVVTSLRHRSDGK--VFAAGFAAGAGIRVWDALTG--RTLAEDKAFQDATVSSLAFAAD 214

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
               V  S  +G  +LY   ++     R+S  K  + F   +SP G  +A    S
Sbjct: 215 GRLAV--SSSDGFVRLYA--ADFRLLARVSVRKTGTPFGLAFSPDGRTLAIGYRS 265



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/192 (14%), Positives = 62/192 (32%), Gaps = 15/192 (7%)

Query: 223 QQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV----Q 277
              +A A+ D    +               +       +     S +G +AL++      
Sbjct: 75  GTLIATASLDKSLRLWDGQSGRLLGGVPVPQGDGLEGSLYTVSLSPDGSKALVAGYTAQS 134

Query: 278 KDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D +  +Y +D+++   + R+     +  S  +  D    VF +       + V  +   
Sbjct: 135 WDGSPSLYLIDVKAQKLQFRIKGLPAVVTSLRHRSDGK--VFAAGFAAGAGIRVWDALTG 192

Query: 337 DQKRISQDK---EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             + +++DK   +A+     ++  G L      S     +            + +     
Sbjct: 193 --RTLAEDKAFQDATVSSLAFAADGRLAV--SSSDGFVRLYAADFRLLARVSVRKTGTPF 248

Query: 394 APTWSPSGRSLI 405
              +SP GR+L 
Sbjct: 249 GLAFSPDGRTLA 260


>gi|85374315|ref|YP_458377.1| dipeptidyl aminopeptidase [Erythrobacter litoralis HTCC2594]
 gi|84787398|gb|ABC63580.1| dipeptidyl aminopeptidase [Erythrobacter litoralis HTCC2594]
          Length = 766

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 56/143 (39%), Gaps = 8/143 (5%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +  D S +++ S+R+G   LY   ++G   +++++             +   + FT   
Sbjct: 369 RWLEDGS-LLWWSERDGFGHLYRRTADG--WQQLTRGDWVVTKLVGLDEEKGTVFFTATK 425

Query: 368 GEKFAIGVMKKD----GSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            +     V   D    GS+   L E   + + T    G++L+ +R    D  S+ Y  D 
Sbjct: 426 DDPLEQHVYSLDLEQPGSEPARLTERGFVHSATMDKDGKTLLITRSSH-DQPSQTYLADQ 484

Query: 424 NGRNETLINTPAYASDPQWVGFM 446
            G     +   A  S+  +  ++
Sbjct: 485 AGEPLAWVEQNALDSEHPYAPYL 507



 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 42/267 (15%), Positives = 91/267 (34%), Gaps = 43/267 (16%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL-- 237
           V  S            +  DG  +  L    D+      ++ +++   +    D ++L  
Sbjct: 58  VFASPSLDGPSPRQAKLSPDGRYLTLLRNREDERERYDLWAYDRESREWTMLVDSEMLGS 117

Query: 238 -RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
            R    D ++ R   R+G+ + +I    ++++G   L+ +  D  + +  +D       R
Sbjct: 118 GRELSEDEKMQRERARVGDLKGIISY-SWNTDGSGVLVPL--DGDLYLARLD---GEIVR 171

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG---------------SDQKRI 341
           LT+T    ++   S     + F  DR    QL+V +  G                + + +
Sbjct: 172 LTDTEETELNPKLSETGKFVSFVRDR----QLWVGEVGGEASPITPKEGELIRWGEAEFV 227

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           +Q++ +      W PQ   IA  +       +      G+    + +             
Sbjct: 228 AQEEMSRMDGYWWGPQDRRIAVQRTDESPVGVVTRAAIGATGTRVFDQR----------- 276

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               +      +   +L+ +D NG N 
Sbjct: 277 ----YPVAGSDNAVVELFVMDPNGGNR 299


>gi|294817096|ref|ZP_06775738.1| WD-40 repeat-containing protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294321911|gb|EFG04046.1| WD-40 repeat-containing protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 1178

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 52/316 (16%), Positives = 89/316 (28%), Gaps = 54/316 (17%)

Query: 120 GKDRLRVEFR------LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
              RL V +R      LWD +  ++++      +P    ++    +DD   +     G  
Sbjct: 651 PGGRLYVSYRPGAGLTLWDTRTGRRLLAVPGKQTPV---RLVTLSADDGLLAFCPSGG-- 705

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF--SPNQQKVAYATY 231
                              L + D  G+  R  TP    I        +P+ +  A +T 
Sbjct: 706 ------------------RLQLWD-TGSGRRLATPGASGICAAESLVPAPDGRSFAVSTE 746

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                  V + D R  R   RI    S   A  F S+G            +   +     
Sbjct: 747 GG-----VRVWDARTGRTLHRIPARGSATTA--FGSDGTLLATLDSAGVGLWRLTTGAPP 799

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQL-YVMQSNGSDQKRISQDKEASYF 350
               R+             PD+  +     R  + Q    + +   D+        A   
Sbjct: 800 RPLLRVPRGAMNLAELRIDPDTGAL-----RSLEYQPSLTLWTFAYDRAAAQGPGAAPLG 854

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-----QAP-TWSPSGRSL 404
              +SP G  +         + +     DG    +L             P  +SP GR  
Sbjct: 855 RAAYSPDGTRLV--THRAGAYRVR-DAADGRVLAVLPGPGGAVGCGECVPMAFSPDGRHF 911

Query: 405 IFSRKKDGDTGSKLYS 420
            ++      T   L +
Sbjct: 912 GYADASGRLTVRDLVT 927



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 36/275 (13%), Positives = 68/275 (24%), Gaps = 38/275 (13%)

Query: 192  SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +L     D              L    +SP+  ++         +               
Sbjct: 834  TLWTFAYD---RAAAQGPGAAPLGRAAYSPDGTRLVTHRAGAYRVRDAADGRVLAVLPGP 890

Query: 252  RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                     +   FS +G+    +   D +  +   DL +  +         +   S   
Sbjct: 891  GGAVGCGECVPMAFSPDGRHFGYA---DASGRLTVRDLVTGVSRSAPAPPSFDGGLSVGA 947

Query: 312  DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GE 369
              ++I   + R G               R+   +        WS    L+A       G 
Sbjct: 948  GGTEI--RASRSGPGH--------KSVDRLRLPERGGSGSRGWS---TLLAGVHGPVLGT 994

Query: 370  KFAIGVM--------KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR-------KKDGDT 414
                 V+         + G    +L    +  A  + P G     +         + G  
Sbjct: 995  TPEDAVLTGRRTLIEPRTGRARTVLPGAGHAHAVAFGPDGAHTALTGADGRVTLWRSGGR 1054

Query: 415  GS--KLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
                +L   D           PA++ D +WV   D
Sbjct: 1055 APLAELAPADPAAAFRGRPPAPAFSPDSRWVALAD 1089


>gi|240848544|ref|NP_001155608.1| WD repeat domain 61-like [Acyrthosiphon pisum]
 gi|239788565|dbj|BAH70957.1| ACYPI005157 [Acyrthosiphon pisum]
          Length = 323

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 58/172 (33%), Gaps = 9/172 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S  + ++L + +                L+   FSP+   +   ++  +    + L    
Sbjct: 100 SSALDSTLMLWNTTTGEKIKTFSIGPVELWTIAFSPDDNYIISGSHSGK----INLFGVE 155

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             +  +         L+  +S +GK        D  ++++ V L    T  L        
Sbjct: 156 TGKQEQTFDTRGKFTLSIAYSPDGKYIA-CGALDGIINVFDV-LSGKLTHTLEGHAMPIR 213

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           S  +S DS  ++  +D +G+ ++Y +     +         +      +SP 
Sbjct: 214 SLCFSSDSKYLLTGAD-DGQMKIYAVHHA--EVLGTVSGHGSWVLSVDFSPD 262



 Score = 37.3 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 50/137 (36%), Gaps = 10/137 (7%)

Query: 273 LISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +++   DE + I++ D  +N    + L+      IS + + D+S I           L +
Sbjct: 53  IVTGSIDETVKIWNYDKATNLNLDKTLSEHTLGVISVALNSDASIIA---SSALDSTLML 109

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             +   ++ +         +   +SP  + I     SG    I +   +  ++    +  
Sbjct: 110 WNTTTGEKIKTFSIGPVELWTIAFSPDDNYIISGSHSG---KINLFGVETGKQEQTFDTR 166

Query: 391 NLQ--APTWSPSGRSLI 405
                +  +SP G+ + 
Sbjct: 167 GKFTLSIAYSPDGKYIA 183


>gi|320161822|ref|YP_004175047.1| hypothetical protein ANT_24210 [Anaerolinea thermophila UNI-1]
 gi|319995676|dbj|BAJ64447.1| hypothetical protein ANT_24210 [Anaerolinea thermophila UNI-1]
          Length = 666

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 50/144 (34%), Gaps = 11/144 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R +++GK  ++               ++   E +      ++    SPD     F   R 
Sbjct: 114 RLTADGKTIVVGTTAGIEFYDARTQAKNGGFE-VEFLRAFDM----SPDGR---FILTRA 165

Query: 324 GKEQLYVMQSNGSDQKR--ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           G + L V + +G   +   +      +      SP G L+A  +  G+      +     
Sbjct: 166 G-DTLTVWRQDGQKVREFALEAGDAWALNAVALSPDGSLLAVQRPRGQVVEPDRVDVYRV 224

Query: 382 QERLLVEDSNLQAPTWSPSGRSLI 405
           ++  LV+        +SP G+ L 
Sbjct: 225 EDGSLVDTVRGMGAQFSPDGKYLA 248



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 72/201 (35%), Gaps = 29/201 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +   +      D L V+  D +  R           + A   S +G    +   + 
Sbjct: 155 SPDGR---FILTRAGDTLTVWRQDGQKVREFALEAGDAWALNAVALSPDGSLLAVQRPRG 211

Query: 280 EAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           + ++   VD+      R+ +   ++      A +SPD   +    D     +LY +   G
Sbjct: 212 QVVEPDRVDV-----YRVEDGSLVDTVRGMGAQFSPDGKYLATVFDAS--VRLYPVAELG 264

Query: 336 SD-QKRISQDK----EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL----- 385
              +KR+ ++            V+SP G L A  +       + V + +  +        
Sbjct: 265 QGWEKRLPRETLPWCGEDTCGLVFSPDGTLAAVVRAG----RVDVYQVETRKLVRQVSGW 320

Query: 386 -LVEDSNLQAPTWSPSGRSLI 405
            +++   L    ++P+G  ++
Sbjct: 321 EVLDRYTLPQVQFAPAGEQVL 341


>gi|237726139|ref|ZP_04556620.1| dipeptidyl peptidase IV [Bacteroides sp. D4]
 gi|229435947|gb|EEO46024.1| dipeptidyl peptidase IV [Bacteroides dorei 5_1_36/D4]
          Length = 737

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 41/323 (12%), Positives = 96/323 (29%), Gaps = 81/323 (25%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPR------------FSPNQQKVAYATYDDED 235
            + N+L V   DG   +     +  +  +              +SP    +A+   D+  
Sbjct: 153 TLDNNLFVTTADGKTQQVTDEPKGIVCGQSVHRQEFGISKGTFWSPKGNLLAFYRMDESM 212

Query: 236 ILRVYLMDTRIDRAPKRIGNFR--SMILA--------PR--------------------- 264
           +     ++T    A      +    M           P                      
Sbjct: 213 VTDYPQVNTSTRIATLEPDKYPMAGMTSHKVTVGIYNPATQKTVYLKAGDPTDRYFTNIS 272

Query: 265 FSSNGKRA-LISVQKDEAMDI-YSVDLQSNATERLTNTLFINISAS----------YSP- 311
           +S + K   +I + +D+   +    D ++     L N        +          + P 
Sbjct: 273 WSPDEKSVYVIELNRDQNHALLCCYDAETGDP--LKNNPLYEEEHTKYVEPQHPIVFLPW 330

Query: 312 DSSQIVFESDREGKEQLYVMQSNGS------------------DQKRISQDKEASYFDPV 353
           D ++ +++S R+G   LY+M +  S                    ++++Q          
Sbjct: 331 DHTKFIYQSQRDGYNHLYLMDTKTSIYPESHGAAAGGSYRESYKTRQLTQGNWVVQNILG 390

Query: 354 WSPQGD--LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSRK 409
           ++ +    +I  T+ S  +     +     + RL+     +     S SG  +I  ++  
Sbjct: 391 FNEKTKEVIIMSTEVSPLQSNAYAVNVKTGKRRLIGNKDGMHHVQLSGSGNYVIDNYTSF 450

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
                  ++      G+  +L+ 
Sbjct: 451 TI-PRNIEIVPTSGKGKTISLLT 472


>gi|212723938|ref|NP_001131600.1| hypothetical protein LOC100192950 [Zea mays]
 gi|195655775|gb|ACG47355.1| stress protein [Zea mays]
 gi|238009046|gb|ACR35558.1| unknown [Zea mays]
          Length = 610

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S+S SPD ++ V    ++GK ++Y +  +   ++ + +    +     +SP    ++  
Sbjct: 452 TSSSVSPDGTEAV-VGAQDGKLRIYSISGDTLTEEALLEKHRGAITSIHYSPD---VSMF 507

Query: 365 KFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLI 405
             +       V  +   + +L   L   + + +  WSP  R + 
Sbjct: 508 ASADTNREAVVWDRASREVKLKNMLYHTARINSLAWSPDSRLVA 551



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 66/231 (28%), Gaps = 54/231 (23%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY-LMDTRIDRAPKRIGNFRSMILAP 263
           +  P         RFSPN + VA  + D    +RV+     R  +A  R  + R   L  
Sbjct: 51  WAYPDHAYPTTVARFSPNGEWVA--SADASGCVRVWGRYGDRALKAEFRPLSGRVDDL-- 106

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNAT----------------------ERLTNTL 301
           R+S +G R ++S        + +    S +T                        +T   
Sbjct: 107 RWSPDGLRIVVSGDGKGKSFVRAFVWDSGSTVGEFDGHSKRVLSCDFKPTRPFRIVTCGE 166

Query: 302 -----FINISA-----------------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                F                       Y+PD S+ +  S    K+ L      G    
Sbjct: 167 DFLANFYEGPPFKFKHSIRDHSNFVNCIRYAPDGSKFITVS--SDKKGLIYDGKTGEKIG 224

Query: 340 RISQDKE--ASYFDPVWSPQGDLIAFTKFSGEKFAIGVM-KKDGSQERLLV 387
            +S +     S +   WSP    +             +M    G   R L 
Sbjct: 225 ELSTEGNHTGSIYAVSWSPDSKQVLTVSADKSAKVWDIMEDASGKLNRTLS 275



 Score = 43.1 bits (100), Expect = 0.093,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 35/110 (31%), Gaps = 6/110 (5%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVF 318
           I +   S +G  A++  Q D  + IYS+   +      L        S  YSPD S    
Sbjct: 451 ITSSSVSPDGTEAVVGAQ-DGKLRIYSISGDTLTEEALLEKHRGAITSIHYSPDVSMFA- 508

Query: 319 ESDREGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFS 367
               +   +  V      + K        A      WSP   L+A     
Sbjct: 509 --SADTNREAVVWDRASREVKLKNMLYHTARINSLAWSPDSRLVATGSLD 556



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 66/185 (35%), Gaps = 23/185 (12%)

Query: 198 RDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            +G   ++    RD   F    R++P+  K    + D + ++       +I       GN
Sbjct: 173 YEGPPFKFKHSIRDHSNFVNCIRYAPDGSKFITVSSDKKGLIYDGKTGEKIGELSTE-GN 231

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATERLTNTLFIN------ISAS 308
               I A  +S + K+ L +V  D++  ++  ++  S    R  +   I       +   
Sbjct: 232 HTGSIYAVSWSPDSKQVL-TVSADKSAKVWDIMEDASGKLNRTLSCPGIGGVDDMLVGCL 290

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK-----EASYFDPVWSPQGDLIAF 363
           +  D   +V  S         V  ++  DQ+ ++         +  F P  SP    I  
Sbjct: 291 WQND--HLVTVSL---GGTFNVFSASNPDQEPVTFAGHLKTVSSLVFFPQSSP--RTILS 343

Query: 364 TKFSG 368
           T + G
Sbjct: 344 TSYDG 348



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 42/123 (34%), Gaps = 8/123 (6%)

Query: 201 ANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            N + ++ ++ +  +     SP+  +      D +  LR+Y +          +   R  
Sbjct: 437 HNSKVISTTKVNYAITSSSVSPDGTEAVVGAQDGK--LRIYSISGDTLTEEALLEKHRGA 494

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISASYSPDSSQIV 317
           I +  +S +     +    D   +    D  S     + +        S ++SPDS  + 
Sbjct: 495 ITSIHYSPD---VSMFASADTNREAVVWDRASREVKLKNMLYHTARINSLAWSPDSRLVA 551

Query: 318 FES 320
             S
Sbjct: 552 TGS 554


>gi|217978046|ref|YP_002362193.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Methylocella silvestris BL2]
 gi|217503422|gb|ACK50831.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Methylocella silvestris BL2]
          Length = 636

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 32/88 (36%), Gaps = 3/88 (3%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTWSPSG 401
                F    SP G  +A+         + +   D    ++      +  ++   W+  G
Sbjct: 13  GNPYKFSGKISPDGLFLAWLAPLDGVLNVWIAPIDAIDRAEPVTKDTNRGIRTFEWANDG 72

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             L++ + K+GD    +Y++D   R   
Sbjct: 73  HHLVYMQDKEGDENFHIYAVDTETRAIR 100



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 3/85 (3%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIAFT 364
           S   SPD   + + +  +G   +++   +  D  + +++D         W+  G  + + 
Sbjct: 19  SGKISPDGLFLAWLAPLDGVLNVWIAPIDAIDRAEPVTKDTNRGIRTFEWANDGHHLVYM 78

Query: 365 --KFSGEKFAIGVMKKDGSQERLLV 387
             K   E F I  +  +    R L 
Sbjct: 79  QDKEGDENFHIYAVDTETRAIRDLT 103


>gi|326498665|dbj|BAK02318.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 709

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/188 (13%), Positives = 62/188 (32%), Gaps = 26/188 (13%)

Query: 219 FSPNQQKVAYATYDDEDIL------RVYLMDTRIDRAPKRIGNF---------RSMILAP 263
            SP+   V + T + +          +YL+       P  I  F         R    AP
Sbjct: 239 ISPDGSLVVFNTKNIDLPAANFTSSTLYLVPHNRSTEPVPINAFSGASTPPDARGATSAP 298

Query: 264 RFSSNGKRALIS-----VQKDEAMDIYSVDLQSNATERLTNTLF-INISA---SYSPDSS 314
            FS +  +   +       + +   +Y  D+       +T+     + S    S++PD +
Sbjct: 299 TFSPDSTKLAYAQMNGISYESDRNILYIADVTGGD-FNITSLAGNWDRSPDHISWTPDGA 357

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            +   +   G  +++ +  + S     +   +  +         G+++           +
Sbjct: 358 SLFVGAPDRGYNRVFEVPLSASASFTPTNITDQGALASVNVLADGNILVSDAKIWSSRDV 417

Query: 374 GVMKKDGS 381
            ++  +G+
Sbjct: 418 YIISPNGT 425



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 63/182 (34%), Gaps = 10/182 (5%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATY------DDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           P        P FSP+  K+AYA         D +IL +  +           GN+     
Sbjct: 289 PDARGATSAPTFSPDSTKLAYAQMNGISYESDRNILYIADVTGGDFNITSLAGNWDRSPD 348

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYSPDSSQIVF 318
              ++ +G    +         ++ V L ++A      +T+   +  S +   D + +V 
Sbjct: 349 HISWTPDGASLFVGAPDRGYNRVFEVPLSASASFTPTNITDQGAL-ASVNVLADGNILVS 407

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           ++       +Y++  NG+    + +  E         PQ     F + S  +    V+  
Sbjct: 408 DAKIWSSRDVYIISPNGTLVADLLRSNEIDEELSGLGPQDVSEIFVQGSIAEVQAFVVTP 467

Query: 379 DG 380
            G
Sbjct: 468 TG 469



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 37/268 (13%), Positives = 85/268 (31%), Gaps = 47/268 (17%)

Query: 221 PNQQKVAY---ATYDDEDILRVYLMDTRIDRAPKRIGNFR----SMILAPRFSSNGKRAL 273
           PN   + Y      +D+  + +Y  D         + +F      +  A   S +     
Sbjct: 90  PNATSIIYLNGTNEEDDGGVSLYAGDVNAIDDAYLVASFPAPYSGLKAATTPSGDINFIF 149

Query: 274 -ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY--- 329
            +    +       +  +S  T R+ + +++    ++  + ++ VF     G ++     
Sbjct: 150 NVEAYPNGTAYNELLAEESLTTARIYSGIYVRHWDTWRSERNKNVFSGTLTGGDEFSFSG 209

Query: 330 --------VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-------GEKFAIG 374
                   +  +  ++   +  D  + Y     SP G L+ F   +            + 
Sbjct: 210 NLTNLVHGLANATVAESPSVVGDDSSEY---DISPDGSLVVFNTKNIDLPAANFTSSTLY 266

Query: 375 VMKKDGSQERLLVE-----------DSNLQAPTWSPSGRSLIFSRKKDGDTGSK---LYS 420
           ++  + S E + +                 APT+SP    L +++       S    LY 
Sbjct: 267 LVPHNRSTEPVPINAFSGASTPPDARGATSAPTFSPDSTKLAYAQMNGISYESDRNILYI 326

Query: 421 IDLNGRNETLINTPA-YASDP---QWVG 444
            D+ G +  + +    +   P    W  
Sbjct: 327 ADVTGGDFNITSLAGNWDRSPDHISWTP 354


>gi|317967972|ref|ZP_07969362.1| hypothetical protein SCB02_00404 [Synechococcus sp. CB0205]
          Length = 179

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 50/144 (34%), Gaps = 5/144 (3%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +P  S + + +A           +          P R         +P  S NG+   + 
Sbjct: 38  QPALSGDGRLLASLVERGGRTTVLLQERRSGKVLPLRHLKRHQPHSSPSLSWNGRYLALL 97

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQ 332
           +Q+    +    D  S A + L   L  N      S +PD+ Q+  E   +G  +L +  
Sbjct: 98  IQRGARREAVIEDRASGALQPL--FLPGNAEPRRLSLAPDARQLAVELTSQGSTRLQIYD 155

Query: 333 SNGSDQKRISQDKEASYFDPVWSP 356
            +G  +  ++  +  S   P   P
Sbjct: 156 LSGLLEPDLAPGQRESGGGPGVEP 179



 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 7/131 (5%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQ 357
           N        + S D   +    +R G+  + + +        +   K    +  P  S  
Sbjct: 31  NGAENREQPALSGDGRLLASLVERGGRTTVLLQERRSGKVLPLRHLKRHQPHSSPSLSWN 90

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDT 414
           G  +A     G +    +  +     + L    N + P   + +P  R L       G T
Sbjct: 91  GRYLALLIQRGARREAVIEDRASGALQPLFLPGNAE-PRRLSLAPDARQLAVELTSQGST 149

Query: 415 GSKLYSIDLNG 425
             ++Y  DL+G
Sbjct: 150 RLQIY--DLSG 158


>gi|312961309|ref|ZP_07775814.1| hypothetical protein PFWH6_3225 [Pseudomonas fluorescens WH6]
 gi|311284967|gb|EFQ63543.1| hypothetical protein PFWH6_3225 [Pseudomonas fluorescens WH6]
          Length = 390

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 54/350 (15%), Positives = 112/350 (32%), Gaps = 69/350 (19%)

Query: 111 LVTGRVIKEGKDRLRVEFRL-WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           L+ G       + +   +RL +D +  +      F   P     +A   ++  + +++  
Sbjct: 29  LLVGSYTAGTSEGI---YRLQFDSRTGQ------FEGKPV----LAAKAANPSWLTVSK- 74

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDR--DGANIR-YLTPSRDQILFEPRFS---PNQ 223
               + + LFV      G       V     D  N +  L      +  EP  S    + 
Sbjct: 75  ----DQQHLFVVNENGPGQKDAVGRVSSYRIDPQNHQLTLINQVQSLGNEPTHSSLAADG 130

Query: 224 QKVAYATY----DDEDILRVYLMDTRID-RAPKRIGNFR-----------SMILAPRFSS 267
           + +  A Y    D    L +  +D       P ++               + + +   S 
Sbjct: 131 RYLFVANYSVMEDPGGSLAILPVDASGKLSPPVQLSAHPASRVNPERQASNHVHSVVSSP 190

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISA-------SYSPDSSQIVF 318
           +GK   +     + +  Y  D ++N  + LT  N   + +          +S D      
Sbjct: 191 DGKYVFVQDLGADKVFAYRYDPKANHEQPLTPANPASVQLPPGSGPRHLLFSADGKHAWL 250

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW---------SPQGDLIAFTKFSGE 369
            ++     Q+ V         + +Q  + +   PV          S  G  + +    G 
Sbjct: 251 TTEMS--AQVAVFDYADGKLTQ-TQLVDYATGQPVSDKAGAALHASSDGKFL-YVSNRGT 306

Query: 370 KFAIGV--MKKDGSQERLLVEDS-NLQAPT-WS--PSGRSLIFSRKKDGD 413
              I V  +    +  + + + S     P  +S  PSG+ L+ + +K  +
Sbjct: 307 ANHILVFSIDPATAHLKQVQQRSVEGDHPREFSLDPSGKFLLIANQKSNE 356


>gi|297190873|ref|ZP_06908271.1| acyl-peptide hydrolase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297150659|gb|EDY67331.2| acyl-peptide hydrolase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 665

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 38/273 (13%), Positives = 78/273 (28%), Gaps = 57/273 (20%)

Query: 190 KNSLCVMDRDGAN------IRYLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRV 239
           +  +  +  DG+       +R L+  R   +  PR SP+  + A+  +D      D   V
Sbjct: 159 RRVVAAVPLDGSAAGDRSAVRELSDDRHHFVTGPRLSPDGTRAAWIAWDHPRMPWDGTVV 218

Query: 240 YLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD---LQSN 292
            + D       + +    G     +    ++ +G   L S       ++  +    L + 
Sbjct: 219 MVGDVTEHGPFENVRPVAGESDESVAQVEWAPDG-SLLFSADGGGWWELQRIRPGALDAA 277

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
               L                SQ             + +   G                 
Sbjct: 278 QRTPLCPGRGEEFGGPLWKIGSQ-------------WFLPLPGG---------------- 308

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
                  LIA     G   A+G++  +  +        +  APT +  G  + F      
Sbjct: 309 -------LIAVIHGKGAT-ALGILDPETGELVDAPGPWSEWAPTLAVHGDRV-FGVAASP 359

Query: 413 DTGSKLYSIDLNGRNETLINTPAYAS-DPQWVG 444
            +  ++  +D       ++ +P     DP +  
Sbjct: 360 RSAYEIVELDTRTGRARVVGSPHDDPVDPAYYP 392



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 54/178 (30%), Gaps = 40/178 (22%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI----VFE----- 319
           G   +     D+ +  Y  D        LT    +     ++    +     V+      
Sbjct: 91  GPLVVFVHFPDQRLYAYEPDRPGAEPRPLTPMSDVGGGLRWADPQPRPERGEVWCVLEEF 150

Query: 320 ---SDREGKEQLYVMQSNGSDQ------KRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
              S  + +  +  +  +GS        + +S D+      P  SP G   A+  +   +
Sbjct: 151 TGPSPTDVRRVVAAVPLDGSAAGDRSAVRELSDDRHHFVTGPRLSPDGTRAAWIAWDHPR 210

Query: 371 FAIGVMKKDGSQERL--LVEDSNLQAPT--------------WSPSGRSLIFSRKKDG 412
                M  DG+   +  + E    +                 W+P G SL+FS    G
Sbjct: 211 -----MPWDGTVVMVGDVTEHGPFENVRPVAGESDESVAQVEWAPDG-SLLFSADGGG 262


>gi|156542765|ref|XP_001602672.1| PREDICTED: similar to wd-repeat protein isoform 1 [Nasonia
           vitripennis]
          Length = 510

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 57/177 (32%), Gaps = 17/177 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +   ++ P    +A  + D      + +   + D     +      I   ++S
Sbjct: 340 FQGHTNEVNAIKWDPQGNLLASCSDDM----TLKIWSMKQDTCLHDLQAHSKEIYTIKWS 395

Query: 267 SNG--------KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             G           L+S   D  + ++ +D +      LT       S ++SPD   +  
Sbjct: 396 PTGPGTLNPNMNLTLVSASFDSDVRLWDID-RGACIYTLTQHTEPVYSVAFSPDGKFLAS 454

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            S     + +++  +        S       F+  W+ +GD +  +   G  F + +
Sbjct: 455 GSF---DKYVHIWSTQSGQLVH-SYKGTGGIFEVCWNSRGDKVGASASDGSVFVLDL 507


>gi|156847482|ref|XP_001646625.1| hypothetical protein Kpol_1028p41 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117304|gb|EDO18767.1| hypothetical protein Kpol_1028p41 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 512

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 74/194 (38%), Gaps = 24/194 (12%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           +     +  +IA   +   Y+ +    G     ++       S      L    R    I
Sbjct: 338 YTGEQPATPEIAKAKALKNYEKVAKRNGKETELMV-----TASDDFTMFLWDPLRTTKPI 392

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA- 262
             +T    +++    FSP+ + +  A++D+     + L D+R  +    I  FR  + + 
Sbjct: 393 ARMT-GHQKLVNHVAFSPDGRHIVSASFDN----SIKLWDSRDGKF---ITTFRGHVASV 444

Query: 263 --PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFE 319
               +SS+  R L+S  KD  + ++  D+++      L        +  +S D  ++   
Sbjct: 445 YQVAWSSD-CRLLVSCSKDTTLKVW--DIRTRKLSVDLPGHKDEVYTVDWSVDGKRVC-- 499

Query: 320 SDREGKEQLYVMQS 333
               GK+++  + +
Sbjct: 500 --SGGKDKMVRIWT 511



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 44/143 (30%), Gaps = 11/143 (7%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N ++        +D         R  +   R+   + ++    FS +G+  + S   D +
Sbjct: 364 NGKETELMVTASDDFTMFLWDPLRTTKPIARMTGHQKLVNHVAFSPDGRHIV-SASFDNS 422

Query: 282 MDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           + ++     S   + +T       S    ++S D   +V  S       L V        
Sbjct: 423 IKLW----DSRDGKFITTFRGHVASVYQVAWSSDCRLLVSCSK---DTTLKVWDIRTRKL 475

Query: 339 KRISQDKEASYFDPVWSPQGDLI 361
                  +   +   WS  G  +
Sbjct: 476 SVDLPGHKDEVYTVDWSVDGKRV 498


>gi|149921346|ref|ZP_01909800.1| WD-repeat protein [Plesiocystis pacifica SIR-1]
 gi|149817779|gb|EDM77243.1| WD-repeat protein [Plesiocystis pacifica SIR-1]
          Length = 351

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 62/176 (35%), Gaps = 20/176 (11%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS----PDSSQI 316
               F+ +G+  ++ +  +  M +  ++ +     +    L  +    +S    P    +
Sbjct: 45  YTADFTPDGRYLVLGIGDEHGMVLLELEGERYVERQ--ADLSGHTEPIWSVAFHPTELLL 102

Query: 317 V----FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
                + + R  +        +G       +   A+     WSP G+L+A        F 
Sbjct: 103 ASGASWPNRRSERAVRLWSIPDGKQVGAALKVGSANIDTLAWSPNGELLA-AGTEAGVFV 161

Query: 373 IGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           I  +   GS+   L  + ++Q      ++P   SL+    +  +       +DL+G
Sbjct: 162 IWRVGAGGSEVEALARNDDVQGVRALAFAPDSSSLLVGHDESWER------VDLDG 211


>gi|118431816|ref|NP_148517.2| acylamino-acid-releasing enzyme [Aeropyrum pernix K1]
 gi|116063138|dbj|BAA81302.2| acylamino-acid-releasing enzyme [Aeropyrum pernix K1]
          Length = 639

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 66/209 (31%), Gaps = 27/209 (12%)

Query: 163 YQSITGEKGDFNSRILF--VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
              ++  +      I F  V   + +   +  + V+ R G    Y           P +S
Sbjct: 17  IARLSSPRLSSKGDIAFSAVIPDLGANKNRPEIRVVWRGGGESYYQGEGDS----MPSWS 72

Query: 221 PNQQKVAYATYD--DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           P+  K+A+A+     +      L        P+R+  F   +    ++S  K  +++   
Sbjct: 73  PDASKLAFASRRGSGKGEKGSGLYIVGRGGEPRRVAWFTHGVSELGWASATKVYVVAPVA 132

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           DE       D          + +  +    +   S  +         +Q++++ +     
Sbjct: 133 DEKTR----DKDG-------DYVATDRLPLWFDSSGLVA-----GLADQIHLVDAESGRT 176

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            R++ +           P G+ I +    
Sbjct: 177 SRLTSEDLGVLTAE---PCGNSIYYVTLR 202



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 63/187 (33%), Gaps = 42/187 (22%)

Query: 261 LAPRFSSNGKRALIS-----VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            +PR SS G     S     +  ++      V  +             +   S+SPD+S+
Sbjct: 21  SSPRLSSKGD-IAFSAVIPDLGANKNRPEIRVVWRGGGESYY-QGEG-DSMPSWSPDASK 77

Query: 316 IVFESDR-----EGKEQLYVMQSNGSDQKRISQDKEA--------SYFDPVWSP------ 356
           + F S R     E    LY++   G + +R++             +    V +P      
Sbjct: 78  LAFASRRGSGKGEKGSGLYIVGR-GGEPRRVAWFTHGVSELGWASATKVYVVAPVADEKT 136

Query: 357 ---QGDLIAFTKF----------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
               GD +A  +           +G    I ++  +  +   L  + +L   T  P G S
Sbjct: 137 RDKDGDYVATDRLPLWFDSSGLVAGLADQIHLVDAESGRTSRLTSE-DLGVLTAEPCGNS 195

Query: 404 LIFSRKK 410
           + +   +
Sbjct: 196 IYYVTLR 202



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 12/93 (12%)

Query: 347 ASYFDPVWSPQGDLIAFTKF------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           A    P  S +GD IAF+        +  +  I V+ + G +     +      P+WSP 
Sbjct: 18  ARLSSPRLSSKGD-IAFSAVIPDLGANKNRPEIRVVWRGGGESY--YQGEGDSMPSWSPD 74

Query: 401 GRSLIFSRKK---DGDTGSKLYSIDLNGRNETL 430
              L F+ ++    G+ GS LY +   G    +
Sbjct: 75  ASKLAFASRRGSGKGEKGSGLYIVGRGGEPRRV 107


>gi|25169049|emb|CAD47885.1| putative ATP/GTP-binding protein [Arthrobacter nicotinovorans]
          Length = 666

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/187 (12%), Positives = 57/187 (30%), Gaps = 11/187 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +      +       + +  + +        + +    +     S +G     S    
Sbjct: 121 SRDGSTAVVSAGGGTPNVSIVDLSSMTVTGVVILEHSSGKL---AVSPDGSTVYASEDAV 177

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            A  + ++D+ +   + +           +    S++   +  +G   L V+        
Sbjct: 178 SARSVVAIDVAARKVKAVIPVGAGPGLPVFVAGGSKVYVANMFDGT--LSVINPATYKVS 235

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGE----KFAIGVMKKDGSQERLLVEDSNLQAP 395
           + +    A   D   SP G  + +   S E     F++  +  D     +    S    P
Sbjct: 236 K-TIQVPAGASDGALSPDGTRMYYPMQSPETLARGFSVVSVATDTVVATIRT-TSVPSTP 293

Query: 396 TWSPSGR 402
            ++P G+
Sbjct: 294 VFTPDGK 300


>gi|324999350|ref|ZP_08120462.1| peptidase S9, prolyl oligopeptidase [Pseudonocardia sp. P1]
          Length = 646

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 32/78 (41%), Gaps = 4/78 (5%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            AS SPD ++I + +   G+  ++V  +  + +D   ++ D         W+     + +
Sbjct: 28  GASLSPDGTRIAYLAPHLGRRNVWVRGIDEDHTDAVCVTHDSRRGITKYHWTDDPRWLLY 87

Query: 364 TKFSGEK--FAIGVMKKD 379
            + +     + +  +  D
Sbjct: 88  EQDTDGNEDWHLYRVDLD 105



 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 4/80 (5%)

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGV--MKKDGSQERLLVEDSN--LQAPTWSPSGRSL 404
           +     SP G  IA+      +  + V  + +D +    +  DS   +    W+   R L
Sbjct: 26  FSGASLSPDGTRIAYLAPHLGRRNVWVRGIDEDHTDAVCVTHDSRRGITKYHWTDDPRWL 85

Query: 405 IFSRKKDGDTGSKLYSIDLN 424
           ++ +  DG+    LY +DL+
Sbjct: 86  LYEQDTDGNEDWHLYRVDLD 105



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 57/163 (34%), Gaps = 22/163 (13%)

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYS--VDLQSNATERLTNT--LFINISASYSPDSSQI 316
                S +G R           +++   +D        +T+     I     ++ D   +
Sbjct: 27  SGASLSPDGTRIAYLAPHLGRRNVWVRGIDEDHTDAVCVTHDSRRGI-TKYHWTDDPRWL 85

Query: 317 VFESDREGKE--QLYVMQSNGSDQKR--ISQDKEASY---FDPVWSPQGDLIAFTKFSGE 369
           ++E D +G E   LY +  +  DQ    ++     S     DP+ S  G+++     +  
Sbjct: 86  LYEQDTDGNEDWHLYRVDLDAPDQPAVDLTPMDPGSRVVGVDPLESQPGNVLVGMNRNPL 145

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
              +  ++    +  LL+E          P G  L+    +DG
Sbjct: 146 SVDLFRIEVATGETTLLLEQPE-------PRGNYLV---DRDG 178



 Score = 38.1 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 81/245 (33%), Gaps = 32/245 (13%)

Query: 211 DQILFEPRFSPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
           D +      SP+  ++AY A +     + V  +D     A     + R  I    ++ + 
Sbjct: 23  DPVFSGASLSPDGTRIAYLAPHLGRRNVWVRGIDEDHTDAVCVTHDSRRGITKYHWTDDP 82

Query: 270 KRALISVQKDEAMD--IYSVDLQSNATERLTNTLFINISASYSPDSSQIV----FESDRE 323
           +  L     D   D  +Y VDL +       +   ++++    P  S++V     ES   
Sbjct: 83  RWLLYEQDTDGNEDWHLYRVDLDA------PDQPAVDLTP-MDP-GSRVVGVDPLESQPG 134

Query: 324 GKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLI-------AFTKF--SGEKFAI 373
                        D  RI     E +       P+G+ +        F         +  
Sbjct: 135 NVLVGMNRNPLSVDLFRIEVATGETTLLLEQPEPRGNYLVDRDGAPVFHSLLTEDGTWEF 194

Query: 374 GVMKKDGSQERLLVEDSNLQAP------TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +  +  + RLL   S  + P        +P G  L+    +D D   +L  +D     
Sbjct: 195 SAVDPETHERRLLRRISGPEHPLGVQPQLVTPDGSGLLLGSYQDSD-DLRLVRVDRETGE 253

Query: 428 ETLIN 432
           ET++ 
Sbjct: 254 ETVVA 258


>gi|319792570|ref|YP_004154210.1| 6-phosphogluconolactonase [Variovorax paradoxus EPS]
 gi|315595033|gb|ADU36099.1| 6-phosphogluconolactonase [Variovorax paradoxus EPS]
          Length = 354

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 34/247 (13%), Positives = 78/247 (31%), Gaps = 27/247 (10%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +  A+Y    I    +       A +++        A    +  +  L +    + 
Sbjct: 112 SGKWLFAASYQGGKISVNAIGKDGTVGAIQQLVQTGPNAHAIHADAANRYVLATSLGGDN 171

Query: 282 MDIYSVDLQSNATER----LTNT--LFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           +  +  D            LT T          +      +    + +    ++   +  
Sbjct: 172 ISSWRFDADKGLLSPNDPALTTTAAKAGPRHFVWDKAQRHVYLLDELDAALHVFAWDATR 231

Query: 336 SDQK--RISQDKEASYFDPVW------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
              K  + +      +    W      +P G  +  ++ +    +   +     Q + L 
Sbjct: 232 GTLKLEQSTTTLPTGFTGKPWAADLHLTPDGRYLYASERTSSTLSAFKVDAATGQLQPLG 291

Query: 388 EDSNLQAPT-WS--PSGRSLIFSRKKDGDTGSKLYSIDLN----GRNETLINTPAYASDP 440
           +    + P  ++  PSGR LI + ++       LY+ID      G+ E L    A   +P
Sbjct: 292 QTPTEKGPRGFAIDPSGRYLIAAGQES--HSISLYAIDAATGALGKPERL----AVGKNP 345

Query: 441 QWVGFMD 447
            W+  +D
Sbjct: 346 NWIEIVD 352


>gi|260946625|ref|XP_002617610.1| hypothetical protein CLUG_03054 [Clavispora lusitaniae ATCC 42720]
 gi|238849464|gb|EEQ38928.1| hypothetical protein CLUG_03054 [Clavispora lusitaniae ATCC 42720]
          Length = 802

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 28/128 (21%)

Query: 266 SSNGKRALISVQKDEAMD------IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           S +  RAL+     +          + +D++S A E L +   +  +A ++P S +I F 
Sbjct: 154 SPDLNRALLRTNTTKGWRHSSTALFWVLDVESQAIEPL-SGKDLVSTALWAPTSDKIAFV 212

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-----------------WSPQGDLIA 362
            D +    +Y+   + +  +RI++D   + F+                   WSPQGD +A
Sbjct: 213 LDND----VYIRHLHAAKVERITKDGSVNIFNGKPDWVYEEEVFAADIAMWWSPQGDKVA 268

Query: 363 FTKFSGEK 370
           F +F+   
Sbjct: 269 FLRFNDTN 276


>gi|303272293|ref|XP_003055508.1| intraflagellar transport protein 122 [Micromonas pusilla CCMP1545]
 gi|226463482|gb|EEH60760.1| intraflagellar transport protein 122 [Micromonas pusilla CCMP1545]
          Length = 1233

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 67/189 (35%), Gaps = 18/189 (9%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            + ++  FSP+  K+           RV + D         +   +  +    +S +GK+
Sbjct: 19  SVCYDIAFSPDGTKLV-----TGVGSRVLVYDAADGNLLHSLKAHKDAVYCVSYSRDGKK 73

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              S   D  + I+S   +     + T+   I   A Y+P S+ +   S       L+  
Sbjct: 74  FA-SGGADRTIIIWSSKAEG--VLKYTHNESIQALA-YNPTSAHLA--SATAVDFGLWAP 127

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                 +  +     A      W+  G  +A  +F G    + V  + G ++  +   + 
Sbjct: 128 D----QKAVVKHKVSAKILSLAWTNDGQYLALGQFDG---VVSVRDRSGGEKMKIKLGAP 180

Query: 392 LQAPTWSPS 400
           +    W+P+
Sbjct: 181 VWTLAWNPN 189


>gi|213403314|ref|XP_002172429.1| polyadenylation factor subunit 2 [Schizosaccharomyces japonicus
           yFS275]
 gi|212000476|gb|EEB06136.1| polyadenylation factor subunit 2 [Schizosaccharomyces japonicus
           yFS275]
          Length = 499

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 38/274 (13%), Positives = 89/274 (32%), Gaps = 25/274 (9%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           K  HT ++     I   +   + R       +++G       + +    N   +  S D 
Sbjct: 71  KYIHTSANKARHVINVVRWTPDGR------RLLTGSSTGEFTLWNGLTFNFELINQSHDY 124

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +    +S + + +   + D   +++ +  +       K +      +    FS N  + 
Sbjct: 125 AVRCAEWSNDGRWLL--SGDGGGMVKYFEPNL---NNVKIVQAHEMEVRDLAFSPNDSK- 178

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            ++   D ++ +++    S   ++LT   +   +  + P    +V  S       +    
Sbjct: 179 FVTASDDGSLKVWNF-HTSAEEQKLTGHGWDVKTVDWHPSKGLLVSGSK---DNLVKFWD 234

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQ--GDLIAFTKFSG--EKFAIGVMKKDGSQERLLVE 388
                        + +     +      +LIA          F +  MK   S   L   
Sbjct: 235 PRTGTCLATLHGHKNTIMQASFQRDTRNNLIATVSRDSTCRIFDLRTMK---SIRVLRGH 291

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           D ++    W P+  +++ +   DG      YS+D
Sbjct: 292 DKDINCLAWHPTNPNIVTTGGSDGSVNH--YSLD 323


>gi|56693322|ref|NP_001008625.1| intraflagellar transport protein 80 homolog [Danio rerio]
 gi|56269722|gb|AAH86735.1| Intraflagellar transport 80 homolog (Chlamydomonas) [Danio rerio]
          Length = 777

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 68/201 (33%), Gaps = 47/201 (23%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
           ++  R  K +   R  +LA R++ +G  ALI+  +D  + I+S   +S      L     
Sbjct: 93  SKSGRIEKSVEAHRGAVLAGRWNYDGT-ALITAGEDGQLKIWS---KSGMLRSTLAQQGT 148

Query: 303 INISASYSPDSSQIVFESDR-------------------------------------EGK 325
              S +++PDS ++++ S R                                      G+
Sbjct: 149 PVYSVAWAPDSGRVLYTSGRQLVVKPLQPNSKVLQWKAHDGVILKVDWSAVNDLILSGGE 208

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +  Y +  +       S   +       W+P G+L A   F      + +  K G    L
Sbjct: 209 DCKYKVWDSYGRLLFSSAPHDYPITSVAWAPDGELFAMGSF----HTLRLCDKTGWSYSL 264

Query: 386 -LVEDSNLQAPTWSPSGRSLI 405
                 +L +  WS  G  L 
Sbjct: 265 EKPSTGSLLSLCWSADGTQLA 285


>gi|322384665|ref|ZP_08058343.1| 6-phosphogluconolactonase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321150550|gb|EFX44031.1| 6-phosphogluconolactonase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 384

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 59/212 (27%), Gaps = 20/212 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI--LRVYLMDTRIDRAPKRIGNFR 257
           G+N            F   FSP+++ +       + I    +      +    +   +  
Sbjct: 152 GSNPERQDRPHPHSSF---FSPDERYLFVPDLGIDRICTYTIDSDRHVLQLHGETKTHPG 208

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-------TLFINISASY- 309
           +      F  NG+ A +  + D  +  +     +     +             N  A   
Sbjct: 209 AGPRHMTFHPNGRYAYVINEVDSTITAFRYAANTGELREIATISTIPEEFAGENTCAEIV 268

Query: 310 -SPDSSQIVFESDREGKE-QLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFT 364
            S D  Q ++ S+R      +Y +          + +S + E      +  P G  +   
Sbjct: 269 TSRDG-QFLYGSNRGHDSIAVYAINEQTGALTLVEHVSTEGEHPRHFALI-PDGTHMIVA 326

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                      + ++  + +      +   P 
Sbjct: 327 NRDTNNIVTFCVDQETGKLKSTGHSVSTSKPV 358


>gi|317406057|gb|EFV86322.1| hypothetical protein HMPREF0005_04416 [Achromobacter xylosoxidans
           C54]
          Length = 379

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 16/121 (13%)

Query: 306 SASYSPDSSQIVFESD-REGKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           S S  P+    +F    + G  +  VM+   +     R +     SY    +SP+G+ I 
Sbjct: 49  SLSVHPNGVDWLFVECAQSGDNRCDVMRYQLDSGRLYRYALPPAYSYTYARYSPKGNFIV 108

Query: 363 FT------------KFSGEKFAIGVMKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            +            + S     I +M+ DGS  E + V   N  +P  SP    + F R 
Sbjct: 109 MSRMPVYGDTEDELRRSLHDLQIVLMRADGSAFEVVPVAPGNKLSPFMSPDESRIAFWRS 168

Query: 410 K 410
           +
Sbjct: 169 E 169


>gi|255635211|gb|ACU17960.1| unknown [Glycine max]
          Length = 446

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 54/168 (32%), Gaps = 9/168 (5%)

Query: 191 NSLCVMDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           N   V D D    +     S    +     SP+ + V        D     L+D++  + 
Sbjct: 256 NDCGVRDFDMERFQLSKHFSFSWPVNHTSLSPDGKLVVIV----GDNPEGILVDSQTGKT 311

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
            K +        A  +  +G R   +  +D+   ++ V   S +   L   L    S  +
Sbjct: 312 VKPLCGHLDYSFASAWHPDG-RIFATGNQDKTCRVWDVRNLSKSIAVLKGNLGAIRSIRF 370

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           + D   +      E  + ++V  +    +K    +         +SP 
Sbjct: 371 TSDGRFMAMA---EPADFVHVYDAQSGFEKEQEINFFGEISGVSFSPD 415


>gi|239996781|ref|ZP_04717305.1| Dipeptidyl peptidase IV [Alteromonas macleodii ATCC 27126]
          Length = 831

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/235 (14%), Positives = 78/235 (33%), Gaps = 14/235 (5%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIK-NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
                 G  +  +  V E       +   +  M RD   ++    ++  I    R+  N 
Sbjct: 335 KYFNLPGYNDDVLADVKEENAKAKGETYEVNRMPRDITLLQSWYWTKPSI----RWHKNG 390

Query: 224 QKVAYA--TYDDEDILRVYL-MDTRIDRAPKRIGNFRSMIL---APRFSSNGKRALISVQ 277
             VA     +D++D     + +  +      R+ +   +     A  + ++ +      +
Sbjct: 391 NAVAVMLEAWDNKDRWIATVDLANKTLENQHRLHDDAWVNYRFNAFDWLNDSETLYYQSE 450

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 +Y +         LT+  FI    + S D + I F+++ E      V +++ SD
Sbjct: 451 HTGYSHLY-IQKPGEKPVALTSGRFIVDDLTLSGDDNYIYFKANMEHPGLYEVYRADLSD 509

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKD-GSQERLLVEDS 390
               +        D   SP G  +  +     +   + +   D  +  + + + +
Sbjct: 510 NTIDTMTDLNGMTDYSLSPDGKNLLLSHSKVNQPQELYIKPADETTAAKQITQST 564


>gi|149180356|ref|ZP_01858861.1| hypothetical protein BSG1_05035 [Bacillus sp. SG-1]
 gi|148852548|gb|EDL66693.1| hypothetical protein BSG1_05035 [Bacillus sp. SG-1]
          Length = 391

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 47/309 (15%), Positives = 103/309 (33%), Gaps = 49/309 (15%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
            ++  K  ++ R +   +    G  K  L +   D        P         ++SP   
Sbjct: 39  YVSSPKWSYDGRFVAFIDGDEKGK-KTELFI--YDTKEKETFQPYVKIETSNFKWSPVNN 95

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD----- 279
           ++AY +    ++ +V       +  P+   N         +  NGK  ++S Q +     
Sbjct: 96  QLAYTSGGVLNVTKVK------NGRPQGFENVSLGAGDFEWFPNGKEFIVSSQPNLLPTG 149

Query: 280 -EAMDIYSVDLQSN-ATERLTNTLFINI-SA----------SYSPDSSQIVF-----ESD 321
            E + +Y + +++  + E +     I                +S + + + F      S 
Sbjct: 150 WEPIKLYKIPVEAKLSPENVKLFYTIETNEPDFFAITADYFKWSHNGNWLSFLATPTASW 209

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA------IGV 375
                 L V+ S G     I +      +   W+P  D +A+    G  F       I  
Sbjct: 210 SNDSNTLCVLNSKGEQFHTIGKMLWYPDWMK-WAPSTDHLAYISGEGRFFVENKKSTIAD 268

Query: 376 MKKDGSQERLLVEDSNLQAPTW-SPSGRSLIFSRKKDGDTG--------SKLYSIDLNGR 426
           M     Q++   +        W SP  R ++   +++ +          + L++I++   
Sbjct: 269 MPAAVQQKQYTPDGYVDLDLAWFSP-ERVIVARAEENKEWDEGPIPTMFTSLHAINIGTD 327

Query: 427 NETLINTPA 435
           ++  +  P 
Sbjct: 328 SQEQLTFPG 336



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 29/249 (11%), Positives = 81/249 (32%), Gaps = 38/249 (15%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRID 247
             + L + +  G     +  +++  +  P++S + + VA+   D++     +++ DT+  
Sbjct: 19  RSHQLWIKEGKGE----IQITKNAYVSSPKWSYDGRFVAFIDGDEKGKKTELFIYDTKEK 74

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              +      +     ++S    +   +        +    +++   +   N        
Sbjct: 75  ETFQPYVKIETSNF--KWSPVNNQLAYTS----GGVLNVTKVKNGRPQGFENVSLGAGDF 128

Query: 308 SYSPDSSQIVFESDREGKEQLY----------VMQSNGSDQKRI-SQDKEASYFDPV--- 353
            + P+  + +  S        +            + +  + K   + +     F  +   
Sbjct: 129 EWFPNGKEFIVSSQPNLLPTGWEPIKLYKIPVEAKLSPENVKLFYTIETNEPDFFAITAD 188

Query: 354 ---WSPQGDLIAF-----TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGR 402
              WS  G+ ++F       +S +   + V+   G Q   +     L  P    W+PS  
Sbjct: 189 YFKWSHNGNWLSFLATPTASWSNDSNTLCVLNSKGEQFHTI--GKMLWYPDWMKWAPSTD 246

Query: 403 SLIFSRKKD 411
            L +   + 
Sbjct: 247 HLAYISGEG 255



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
               + +  K+G  E  + +++ + +P WS  GR + F    +    ++L+  D   +  
Sbjct: 19  RSHQLWI--KEGKGEIQITKNAYVSSPKWSYDGRFVAFIDGDEKGKKTELFIYDTKEKET 76

Query: 429 TLINTPAYASDPQWVG 444
                    S+ +W  
Sbjct: 77  FQPYVKIETSNFKWSP 92



 Score = 38.1 bits (87), Expect = 3.0,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 52/136 (38%), Gaps = 23/136 (16%)

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFA 372
           + VF        QL++    G  + +I+  K A    P WS  G  +AF      G+K  
Sbjct: 14  KAVFIRSH----QLWIK--EGKGEIQIT--KNAYVSSPKWSYDGRFVAFIDGDEKGKKTE 65

Query: 373 IGVMKK---DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNE 428
           + +      +  Q  + +E SN +   WSP    L ++       G  L    + NGR +
Sbjct: 66  LFIYDTKEKETFQPYVKIETSNFK---WSPVNNQLAYTS------GGVLNVTKVKNGRPQ 116

Query: 429 TLINTPAYASDPQWVG 444
              N    A D +W  
Sbjct: 117 GFENVSLGAGDFEWFP 132


>gi|121704704|ref|XP_001270615.1| eukaryotic translation initiation factor subunit eIF2A, putative
           [Aspergillus clavatus NRRL 1]
 gi|119398761|gb|EAW09189.1| eukaryotic translation initiation factor subunit eIF2A, putative
           [Aspergillus clavatus NRRL 1]
          Length = 687

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 63/184 (34%), Gaps = 19/184 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V  S  S   + +L ++  +G     +   ++  + +  ++PN ++             +
Sbjct: 245 VDRSGKSYYGETTLYLLSANGGFDSRVDLDKEGPIHDVSWNPNSKEFGVVYGYMPAKTTI 304

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  L PR    FS +G+  +++   + A  +   DL  N  +
Sbjct: 305 FNF---------RGVAKHSFPLGPRNTILFSPHGRFVIVAGFGNLAGQMDIYDLDKNYHK 355

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDP 352
            +T          +SPD   I     S R      + +   +G     +  +     +D 
Sbjct: 356 VVTAEASNASVCEWSPDGQYILTATTSPRLRVDNGIRIWHVSGG---LMFNEDMNELYDV 412

Query: 353 VWSP 356
           +W P
Sbjct: 413 IWRP 416



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/223 (14%), Positives = 73/223 (32%), Gaps = 23/223 (10%)

Query: 218 RFSP--NQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALI 274
             SP  N     +          V + +     AP  +   F+   +  ++++NG   L+
Sbjct: 180 AISPGKNNSIAVFIPERKGQPAAVKVFNVPQFGAPVSQKSFFKGDKVQLKWNANGTTLLV 239

Query: 275 SVQKD---------EAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQI-VFESDRE 323
             Q +             +Y +        R+  +        S++P+S +  V      
Sbjct: 240 LAQTEVDRSGKSYYGETTLYLLSANGGFDSRVDLDKEGPIHDVSWNPNSKEFGVVYGYMP 299

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
            K  ++  +        +           ++SP G  +    F      + +   D +  
Sbjct: 300 AKTTIFNFRGVAKHSFPL-----GPRNTILFSPHGRFVIVAGFGNLAGQMDIYDLDKNYH 354

Query: 384 RLLV-EDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSID 422
           +++  E SN     WSP G+ ++ +        D G +++ + 
Sbjct: 355 KVVTAEASNASVCEWSPDGQYILTATTSPRLRVDNGIRIWHVS 397


>gi|115400777|ref|XP_001215977.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114191643|gb|EAU33343.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1645

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/208 (13%), Positives = 71/208 (34%), Gaps = 27/208 (12%)

Query: 195 VMDRDGANIRY---LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++   GA  ++   +       ++   FSP+   +     D +    ++L D +   A  
Sbjct: 170 IVFYHGAPFKFNTSIREKHSNYIYGVSFSPDGSTLVSVGADRK----IWLYDGKTGEAKG 225

Query: 252 RIGN--FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
           +IG+   +  I A  +S + ++  ++   D  + I+  D ++  T + T  +    S + 
Sbjct: 226 QIGDGEHKGSIFAVSWSKDSRK-FVTASADRTVKIW--DAEAGKTTQ-TWHIGGEGSTNV 281

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                 +V+   R     +            +S   + +Y     +P+   +     +  
Sbjct: 282 RDQQVGVVWPPARSDNLLIS-----------LSLSGDLNYLVEG-TPEPRQVVQGHQN-- 327

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTW 397
                       QE L     + +  +W
Sbjct: 328 SITSLTQSSGSGQETLWTGSFDGRVCSW 355



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 3/106 (2%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           R+ + A  FS +G    +   +   + I+ V   S  T+R T       S +++ +++ +
Sbjct: 492 RNPVSALAFSPDGSMLAVGDSR-GRVLIHKVADGSVVTDRWTAHTARITSIAWNENNTHV 550

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S            +N  D  ++    +       W   G  IA
Sbjct: 551 --TSGALDTNIFVWSLTNQGDWLQVRNAHKEGVNGVAWIAGGTKIA 594


>gi|108757678|ref|YP_631449.1| senescence marker protein-30 family protein [Myxococcus xanthus DK
           1622]
 gi|108461558|gb|ABF86743.1| senescence marker protein-30 family protein [Myxococcus xanthus DK
           1622]
          Length = 297

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 42/142 (29%), Gaps = 21/142 (14%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P  +       D E+     L          RI    ++   P FS +G+   ++     
Sbjct: 115 PQGRFWVGTMDDHEEAPTGGLYRFDAQGHLARIDEGYTVTNGPAFSPDGRTLYVNDSPRR 174

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
               + +     A+ R     F        PD       +D EG   L++    G   +R
Sbjct: 175 VTYAFDLSPDGAASRRREFLRF--DEPHGFPDG----MTADAEGG--LWIAFYGGGCVRR 226

Query: 341 ISQDKEASYFDPVWSPQGDLIA 362
                        +SP G  +A
Sbjct: 227 -------------FSPDGAWLA 235


>gi|332096775|gb|EGJ01765.1| peptidase, S54 (rhomboid) family domain protein [Shigella
           dysenteriae 155-74]
          Length = 326

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T       F    S +  K          +  +      ++ D  +++   
Sbjct: 83  ATGEIIQSITTGAHPDSFI--LSRDGTKAWVMNRTSNSVSAIDLATYQHVADIPLEKYDG 140

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+        +I  ++  ++  E            +  +
Sbjct: 141 TGTSGKPGAWVMALSPDERTLLVPGA--GRGNIVRINTITHQKEDFPAGDARGTISAMRF 198

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ V     S   +      + Y     SP G  +A   +  +
Sbjct: 199 RPENGEVIFA-DSQGISRISVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 255

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 256 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 304

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 305 SLDPQAIIRHPQYG 318


>gi|294816431|ref|ZP_06775074.1| Cell surface protein [Streptomyces clavuligerus ATCC 27064]
 gi|326444759|ref|ZP_08219493.1| hypothetical protein SclaA2_26996 [Streptomyces clavuligerus ATCC
           27064]
 gi|294329030|gb|EFG10673.1| Cell surface protein [Streptomyces clavuligerus ATCC 27064]
          Length = 515

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 47/226 (20%), Positives = 79/226 (34%), Gaps = 19/226 (8%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEP-----RFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            ++ RDG           ++  EP     R+    +     T   E++LRVY  D    +
Sbjct: 186 YLVTRDGVRAAQCNTRSGKLTSEPGPLRERWP--YRTFLCVTDSTEELLRVY--DAASGQ 241

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             ++    RS  +A  FS++G      V +D  + +  +   +  T  L  + +   +  
Sbjct: 242 QIQQTTIGRSGQVA--FSTDGFLGFAPVYRDGRLVVCDLTAGTTDTVDLGGSPYGVTA-- 297

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
             PD S  V+  D EG  Q+  +         I      S       P    +  +    
Sbjct: 298 -LPDGS-AVWVGDLEG-PQIRSVDLATGAVTPIRAGGTPSALVAA--PDSRSVYVSCRGD 352

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
              A+ V    G+  R L E SN      +P GR+L       G +
Sbjct: 353 GDVAV-VDTASGAVTRRLGEMSNPSDVVITPDGRTLAVLDPSGGSS 397



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 51/184 (27%), Gaps = 10/184 (5%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   V     +   I  V L    +   P R G   S ++A   + + +   +S + D 
Sbjct: 299 PDGSAVWVGDLEGPQIRSVDLATGAVT--PIRAGGTPSALVA---APDSRSVYVSCRGDG 353

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D+  VD  S A  R    +        +PD   +    D  G      + +       
Sbjct: 354 --DVAVVDTASGAVTRRLGEMSNPSDVVITPDGRTLA-VLDPSGGSSFVALLTTSGTGTT 410

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
              +          +P    +       +   I +          +       +   +P 
Sbjct: 411 RFVETGRDLMGIAAAPDSRTLYTADLGPDVRVIDIPSASRRGT--VTASGRPSSVAVTPE 468

Query: 401 GRSL 404
           G  L
Sbjct: 469 GDRL 472


>gi|242082355|ref|XP_002445946.1| hypothetical protein SORBIDRAFT_07g028550 [Sorghum bicolor]
 gi|241942296|gb|EES15441.1| hypothetical protein SORBIDRAFT_07g028550 [Sorghum bicolor]
          Length = 436

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/153 (12%), Positives = 49/153 (32%), Gaps = 9/153 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +  A       D     ++D    +    +        A  ++ +G+    +  +D
Sbjct: 275 SPDGKLAAIV----GDNPDGLVIDPSSGKTIHELRGHLDYSFASAWNPDGRTFA-TGNQD 329

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +   ++ +   S +   L   +    S  Y+ D   +      E  + +++        +
Sbjct: 330 KTCRVWDIRNLSKSVAVLGGNIGAIRSIRYTSDGKFMAMT---EPADFIHIFDVESGYSR 386

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           +   D         +SP  + + F       F+
Sbjct: 387 KQELDFFGEIAGISFSPDTEAL-FVGVHDRVFS 418


>gi|303281953|ref|XP_003060268.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226457739|gb|EEH55037.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 693

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 39/315 (12%), Positives = 94/315 (29%), Gaps = 33/315 (10%)

Query: 52  FTKFVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVL 111
             K+      G   + + +     S            +K    + +  F  W+   A  +
Sbjct: 295 VFKWAGPSPEGAFFARMGNN--AVSVYSAP-DMSLLGKKSIKLEGVIDFC-WSP--ADPI 348

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPAS---WRKIAHTISDDIYQSITG 168
           ++    + G         L  +  +K+I  K  FS       W++     +  + +    
Sbjct: 349 LSVFQPERGGGNEPARVALISIPSKKEIRSKNLFSVSDVKMFWQQSGDYFAMKVDRHTKS 408

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           +K  ++   LF  +     +    L              P +++ +    + P   + A 
Sbjct: 409 KKSTYSGFELFRVKEPDCPMEVLEL--------------PDKNEKIVAFAWEPKGHRFAV 454

Query: 229 ATYDDEDI---LRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKDEAMDI 284
              D           + D       K IG  ++       +S  GK  +++  K      
Sbjct: 455 IHGDGARPNVSFYTMIDDASAINKVKLIGTLKNKTANHLFWSPQGKTIVLAGLKTMNGQF 514

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRIS 342
              ++        +   F+     + P    +     S  + +   +V   NG   +++ 
Sbjct: 515 EFFNVDE-METMASAEHFMATDVEWDPTGRYVATAVTSVHQMENGFHVWTFNG---RQLY 570

Query: 343 QDKEASYFDPVWSPQ 357
           +     ++  +W P+
Sbjct: 571 KHGRERFYQFLWRPR 585


>gi|114586902|ref|XP_001165558.1| PREDICTED: N-acylaminoacyl-peptide hydrolase isoform 5 [Pan
           troglodytes]
          Length = 686

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 17/131 (12%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY------DDEDILRVYL 241
             +++L  +D  G     L+      +  PR SP+Q ++ Y  Y           L +Y 
Sbjct: 231 NRRSALYYVDLIGGKCELLSDD-SLAVSSPRLSPDQCRIVYLQYPSLIPHHQCSQLCLYD 289

Query: 242 MDTR-----IDRAPKRIGNFRSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQS 291
             T+     +D  P+++G   S I         +S++ +R +    +    D+++VD Q 
Sbjct: 290 WYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFAVDTQV 349

Query: 292 NATERLTNTLF 302
                LT    
Sbjct: 350 GTVTSLTAGGS 360



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 66/200 (33%), Gaps = 28/200 (14%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-PNQQKVAY 228
           +  F ++ L VS S               D A   +  P    ++F   +  P +  + +
Sbjct: 174 ESFFQTKALDVSASDDEIARLK-----KPDQAIKAFWAPGDAGVVFVGWWHEPFRLGIRF 228

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEA-MD 283
            T     +  V L    I    + + +    + +PR S +  R +     S+        
Sbjct: 229 CTNRRSALYYVDL----IGGKCELLSDDSLAVSSPRLSPDQCRIVYLQYPSLIPHHQCSQ 284

Query: 284 IYSVDLQSNA--------TERLT-NTLFINIS----ASYSPDSSQIVFESDREGKEQLYV 330
           +   D  +            +L  N   I  S      +S DS ++VF+S +  ++ L+ 
Sbjct: 285 LCLYDWYTKVTSVVVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFA 344

Query: 331 MQSNGSDQKRISQDKEASYF 350
           + +       ++       +
Sbjct: 345 VDTQVGTVTSLTAGGSGGSW 364


>gi|90022856|ref|YP_528683.1| gluconolactonase [Saccharophagus degradans 2-40]
 gi|89952456|gb|ABD82471.1| gluconolactonase [Saccharophagus degradans 2-40]
          Length = 290

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 47/156 (30%), Gaps = 17/156 (10%)

Query: 199 DGANIRYLTPSRDQILFEP------RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           DG N +    +  +           R     + +A + Y  +D     L     D    +
Sbjct: 80  DGWNTKLRAIADPEATLVKNRFNDGRCDAEGRMIAGSVYPPKDHDGANLWQLGTDLKVTK 139

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS-- 310
           +           FS + K    S      +  Y  DL +      TN    +     +  
Sbjct: 140 LAEGLLTSNGAGFSPDNKTFYFSDTPKHVIYKYDYDLATGEM---TNGTVFHQFPFGNGR 196

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           PD + +    D EG    +     GS   R+S + E
Sbjct: 197 PDGAAV----DSEG--CYWTALYEGSRIVRLSPEGE 226


>gi|66804899|ref|XP_636182.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
 gi|60464544|gb|EAL62682.1| WD40 repeat-containing protein [Dictyostelium discoideum AX4]
          Length = 595

 Score = 45.4 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 48/295 (16%), Positives = 96/295 (32%), Gaps = 26/295 (8%)

Query: 134 KDRKQIIGKKFFSSPASWRKI-AHTISDD--IYQSITGEKGDFNSRIL-FVSESVVSGII 189
           K +K  +G+ +   P+  R +   T      I+      KG    R +      ++S  +
Sbjct: 266 KSKKDYMGRSWVDPPSDLRLVTPDTFVPKKLIHNYTGHTKGVAAIRYIPKYGHLLLSAGM 325

Query: 190 KNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            N++ + D  G            Q + +  FS + ++     YD     +  L DT   +
Sbjct: 326 DNTVKIWDAYGDRRCIQTYMGHSQAVRDICFSNDGRRFLSCGYDR----QTRLWDTETGK 381

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISA 307
                 N + +    +F+ +  +    +       I   D++SN   +     L    + 
Sbjct: 382 ILSSFTNGK-IPYCIKFNPDDDKQEQFLCGGSDKKIIQWDIKSNQIVQEYDQHLGAVNTI 440

Query: 308 SYSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           ++  D+ + V  SD    R     + V+       K IS     S       P+G   A 
Sbjct: 441 TFLDDNRRFVTSSDDKSLRVWDWGIPVV------IKYISDPSMHSMPAVALHPKGKWFAA 494

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDT 414
                +        +    ++      N+        +SP G+ + +S    G  
Sbjct: 495 QSLDNQILIYSARDRFRMNKKKRFLGHNVSGYACQLGFSPDGKFI-YSGDSTGKA 548


>gi|332374162|gb|AEE62222.1| unknown [Dendroctonus ponderosae]
          Length = 571

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 11/122 (9%)

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           +    N      +S  +  S    ++SP G  +A+   +     I V+K D       + 
Sbjct: 18  FCGPPNLGSLSGLSPIESRSCKTSLFSPDGSYLAYANEA----TITVLKTDDWSPVATIL 73

Query: 389 DSNLQAPTWSPSGRSLI----FS---RKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           D+   +  +SP G  L+    F+       G    KLY  D     ++         +PQ
Sbjct: 74  DTRAYSLAFSPKGTFLMTWEPFAVSNANPQGSPNLKLYKTDGGKLIKSFTQKKQGNWEPQ 133

Query: 442 WV 443
           W 
Sbjct: 134 WS 135



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 35/153 (22%)

Query: 265 FSSNGKRALIS-------VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI- 316
           FS +G     +       ++ D+   + ++ L + A            S ++SP  + + 
Sbjct: 43  FSPDGSYLAYANEATITVLKTDDWSPVATI-LDTRA-----------YSLAFSPKGTFLM 90

Query: 317 ------VFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                 V  ++ +G   L + +++G    K  +Q K+ ++ +P WS    L  FT+    
Sbjct: 91  TWEPFAVSNANPQGSPNLKLYKTDGGKLIKSFTQKKQGNW-EPQWSNDEKL--FTRLVNT 147

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTW--SPS 400
                   +D + ER++   +  +  ++  SP+
Sbjct: 148 DIVFY---EDCNFERIVTRLTGHKVISYKLSPN 177



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 33/104 (31%), Gaps = 15/104 (14%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA------ 272
           FSP+   +AYA     +   + ++ T        I + R+  LA  FS  G         
Sbjct: 43  FSPDGSYLAYA-----NEATITVLKTDDWSPVATILDTRAYSLA--FSPKGTFLMTWEPF 95

Query: 273 LIS-VQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSS 314
            +S      + ++           +  T     N    +S D  
Sbjct: 96  AVSNANPQGSPNLKLYKTDGGKLIKSFTQKKQGNWEPQWSNDEK 139


>gi|326915563|ref|XP_003204085.1| PREDICTED: TAF5-like RNA polymerase II p300/CBP-associated
           factor-associated factor 65 kDa subunit 5L-like
           [Meleagris gallopavo]
          Length = 589

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 61/217 (28%), Gaps = 18/217 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 337 ILRGHCGPVYSTRFLSDSSGLLSCSEDM----SIRYWDLGSFTNTVLYQGHAYPVWDLDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+     +++    + P+S+ +   S   
Sbjct: 393 SP--CSLYFASASHDRTARLWSFDR--TYPLRIYAGHLLDVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              L     N+ + T+SP    +  +   +      +
Sbjct: 503 YKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 438 SNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKYLASAGEDQ----RLK 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 494 LWDLASGTLYKELRGHTDNITSLTFSPDSSLIA-SASMDNSVRVWDI 539


>gi|326529563|dbj|BAK04728.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 716

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 38/244 (15%), Positives = 82/244 (33%), Gaps = 43/244 (17%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS-SNG-------KRALI-----S 275
             + +    R+Y         P  +        AP  S ++G       +   +     +
Sbjct: 145 VVFSNYKDQRLYKQPIGTGSLPVPLTPDYG---APDVSYADGFFDPHFSRYITVMEDRRT 201

Query: 276 VQKDEAMDIYSVDLQSN---ATERLTNTLFINISASYSPDSSQIVFE-----SDREGKEQ 327
              +    I S++L +      + L +      S    P   ++ +      +    K +
Sbjct: 202 SSLNPTTTIVSINLSNGDVHEPKVLISGNDFYASPRIDPTRKRMAWIEWGHPNMPWDKSE 261

Query: 328 LYVMQSNGSD--QKRISQDKEA-----SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           L+V   + S    +R+           S  +P WSP+G+L   T      + I    +  
Sbjct: 262 LWVGNFSESGDLTERVCVAGNNPMLVESPAEPKWSPKGELFFVTDRGSGFWNIYKWVEHT 321

Query: 381 SQERLL-VEDSNLQAPTW-----SPS----GRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           ++   +   D+    P W     S         ++F+ ++ G   S L  +D +  + +L
Sbjct: 322 NEVVPMYTLDAEFTRPLWVFGINSYDFLGKSNHIVFTYRRLGR--SYLGVLDCDSGSVSL 379

Query: 431 INTP 434
           ++ P
Sbjct: 380 LDIP 383



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 31/198 (15%), Positives = 74/198 (37%), Gaps = 27/198 (13%)

Query: 171 GDFN---SRILFVSESVVSGIIKNSLCVMDRDGAN----IRYLTPSRDQILFEPRFSPNQ 223
           G F+   SR + V E   +  +  +  ++  + +N       +  S +     PR  P +
Sbjct: 183 GFFDPHFSRYITVMEDRRTSSLNPTTTIVSINLSNGDVHEPKVLISGNDFYASPRIDPTR 242

Query: 224 QKVAYATYDDEDIL----RVYLMD-TRIDRAPKRI---GNFRSMILAPR---FSSNGKRA 272
           +++A+  +   ++      +++ + +      +R+   GN   ++ +P    +S  G+  
Sbjct: 243 KRMAWIEWGHPNMPWDKSELWVGNFSESGDLTERVCVAGNNPMLVESPAEPKWSPKGELF 302

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-----SPD----SSQIVFESDRE 323
            ++ +     +IY     +N    +           +     S D    S+ IVF   R 
Sbjct: 303 FVTDRGSGFWNIYKWVEHTNEVVPMYTLDAEFTRPLWVFGINSYDFLGKSNHIVFTYRRL 362

Query: 324 GKEQLYVMQSNGSDQKRI 341
           G+  L V+  +      +
Sbjct: 363 GRSYLGVLDCDSGSVSLL 380



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 58/381 (15%), Positives = 108/381 (28%), Gaps = 43/381 (11%)

Query: 96  SIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR--K 153
           +   F  W S     +V+G   + G   L  + RL  ++ R +  G+             
Sbjct: 60  TAAPFGSWRSPITADVVSGASKRLGDFALAGDGRLLWIEGRPEEKGRMVIVKEDDKPVDV 119

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI 213
           I    +        G  G F  +   V  S           +    G+    LTP     
Sbjct: 120 IPQEFAARTLAQEYG-GGAFAVQDNVVVFSNYKDQRLYKQPI--GTGSLPVPLTPDYGAP 176

Query: 214 LFEPR---FSPNQQKVAYATYDDE-----DILRVYLMDTRID--RAPKRIGNFRSMILAP 263
                   F P+  +      D           +  ++        PK + +      +P
Sbjct: 177 DVSYADGFFDPHFSRYITVMEDRRTSSLNPTTTIVSINLSNGDVHEPKVLISGNDFYASP 236

Query: 264 RFSSNGKRALISVQKDEA-----MDIYSVDL-QSNATERLTNTLFIN-------ISASYS 310
           R     KR                +++  +  +S            N           +S
Sbjct: 237 RIDPTRKRMAWIEWGHPNMPWDKSELWVGNFSESGDLTERVCVAGNNPMLVESPAEPKWS 296

Query: 311 PDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVW-----SPQ----GDL 360
           P      F +DR  G   +Y    + ++   +    +A +  P+W     S       + 
Sbjct: 297 PKGELF-FVTDRGSGFWNIYKWVEHTNEVVPM-YTLDAEFTRPLWVFGINSYDFLGKSNH 354

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           I FT     +  +GV+  D     LL    +  +   +  G    +     G     +  
Sbjct: 355 IVFTYRRLGRSYLGVLDCDSGSVSLLDIPFSDLSNVVT--GNDYFYIEGASGSIPLSIAK 412

Query: 421 IDLNGRNETLINTP-AYASDP 440
           + L+     +IN    ++S P
Sbjct: 413 VTLDENKTEVINFSIVWSSSP 433


>gi|312221729|emb|CBY01669.1| similar to WD repeat-containing protein [Leptosphaeria maculans]
          Length = 633

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 32/252 (12%), Positives = 73/252 (28%), Gaps = 27/252 (10%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           I  L       +    +SP+ + +       E+  R++  D +     +    F      
Sbjct: 348 IHQLDQHDKSGVTHLAWSPDDRLIITCCSQPENAARIW--DIKTGTCIQHFNEFTYPCTT 405

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNT---LFINISASYSPDSSQIVF 318
             ++ NGK  +I   +D+        L  +      T        ++  + SP+  ++V 
Sbjct: 406 AAWAPNGKHVII-GSQDDKYGCSIWSLHGSLLHNFCTPGSKLRANDL--AISPNGERLVV 462

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            ++      + V      ++    Q  +        S     +  +        I +M+ 
Sbjct: 463 VAENS----IVVFDFATYEKLCEWQIDDVKLTSVTISQDSRHMLVSMDQD---KIRLMEI 515

Query: 379 DGSQERLLVEDSNLQAP----TW-SPSGRSLIFSRKKDGDTGSKLYSIDLNG-RNETLIN 432
           +  +          +       +       ++      G   S++Y    NG   E L  
Sbjct: 516 ESGEVIQRFSGHAQRQFIIRSAFGGADENFVV-----SGSEDSRIYIWRSNGLLIEALDA 570

Query: 433 TPAYASDPQWVG 444
            P   +   W  
Sbjct: 571 HPGCVNSVAWHP 582


>gi|238882693|gb|EEQ46331.1| hypothetical protein CAWG_04678 [Candida albicans WO-1]
          Length = 838

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 21/103 (20%)

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + +D+ +   + + N +    +AS+SPDSS+I F  +      LY       +  +I+ D
Sbjct: 198 WVLDINNGDIKPVFNDVDKISTASWSPDSSKIAFIYE----NNLYYKSLQHDEIVQITFD 253

Query: 345 KEASYFDPV-----------------WSPQGDLIAFTKFSGEK 370
                F+                   WSP+ D +AF + +  +
Sbjct: 254 GSTEIFNGKPDWVYEEEVYGSDHVFWWSPESDKVAFLRSNNTQ 296


>gi|269972987|emb|CBE67038.1| CG3004-PA [Drosophila atripex]
          Length = 309

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 11/151 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    S+ + D        + P  D  + +   SP+ + +A    +++    ++ + +  
Sbjct: 139 GSQNGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA--AANNKGNCYIWSLTSSP 196

Query: 247 D------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           D      R  K+I      IL  +FS +  R L++   D    I+  +        L   
Sbjct: 197 DQKMSTLRPTKKIPAHSRYILRCKFSPD-SRLLLTTSGDGTACIWKTE-DFTKWRELCIE 254

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVM 331
            +    A++S DS  + F +  +G  +L+ +
Sbjct: 255 NYWVWDAAFSNDSKYL-FTASSDGVARLWKL 284



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 36/102 (35%), Gaps = 10/102 (9%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-------MK 377
              +++        +RI  + +AS  D   SP G  +A     G  +   +       M 
Sbjct: 142 NGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSSPDQKMS 201

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                +++      +    +SP  R L+ +    GD  + ++
Sbjct: 202 TLRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIW 240



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 12/144 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------ 291
            V+L D + ++  + +    + I     S +G+    +        I+S+          
Sbjct: 144 SVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA-AANNKGNCYIWSLTSSPDQKMST 202

Query: 292 -NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              T+++       +   +SPDS  ++  S   G     + ++    + R    +    +
Sbjct: 203 LRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIWKTEDFTKWRELCIENYWVW 259

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIG 374
           D  +S     + FT  S     + 
Sbjct: 260 DAAFSNDSKYL-FTASSDGVARLW 282


>gi|241831473|ref|XP_002414852.1| THO complex subunit, putative [Ixodes scapularis]
 gi|215509064|gb|EEC18517.1| THO complex subunit, putative [Ixodes scapularis]
          Length = 325

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 35/226 (15%), Positives = 84/226 (37%), Gaps = 27/226 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           S+  +D+D     ++       + +  + P N  ++A A+ D      V L D R  ++ 
Sbjct: 57  SIFALDKDRMAKDHVFKGHGDSVDQLCWHPSNPDQLATASLDK----TVRLWDARTQKSV 112

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFINISAS 308
             +G  +   +   +S +G+   +  ++D    I   D++S+     T+    F     S
Sbjct: 113 TVVGT-KGENINICWSPDGQTIAVGNKEDLVSFI---DVRSHKVR--TDQQFKFEVNEIS 166

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++  ++     S   G+  ++++       + +     A+     + P G   A      
Sbjct: 167 WNNANTHFFLTS---GQGCIHILSYPSLQLEMVLGAHPANCICIEFDPTGRYFATGSVD- 222

Query: 369 EKFAIGVMKK-DGSQERLLVEDSNLQAP----TWSPSGRSLIFSRK 409
                 ++   D  +   +   S L+ P    ++S  G+ L  + +
Sbjct: 223 -----ALVSLWDVEELACVRTFSRLEWPVRTISFSHDGKMLASASE 263


>gi|255940378|ref|XP_002560958.1| Pc16g06220 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211585581|emb|CAP93292.1| Pc16g06220 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1061

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 80/242 (33%), Gaps = 50/242 (20%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMD-------TRIDRAPKRI---GNFRSMILAPRFSSNG 269
           SP+ +++  A  D    +R++  D       + ++  PK++    N    I   RFS NG
Sbjct: 26  SPDGKRLVTAAGD--GYVRIWSTDAIYGTGTSELEGKPKQLASMSNHSGTIHTVRFSPNG 83

Query: 270 KRALISVQKDEAMDIYSVDLQ------------------SNATERLTNTLFINISASYSP 311
           K    S   D+ + +Y++D                         RL           +S 
Sbjct: 84  KYLA-SGADDKIVCVYTLDANPPTHSSTFGTDEAPPVENWRTIRRLIGHDNDVQDLGWSF 142

Query: 312 DSS---------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           DSS         ++V  S     E+L ++  + S  K I+ D    YF    S    +  
Sbjct: 143 DSSILVSVGLDSKVVVWSGHS-FEKLKMIAIHQSHVKGITFDPANKYFATA-SDDRTVRI 200

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFSRKKDGDT 414
           F   S    +      +       +      +P        +WSP G  +  +   +G  
Sbjct: 201 FRFTSPAPNSSAHDHMNNFVLEQTITAPFANSPLTAYFRRCSWSPDGMHIAAANAVNGPV 260

Query: 415 GS 416
            S
Sbjct: 261 SS 262



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 45/296 (15%), Positives = 94/296 (31%), Gaps = 65/296 (21%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-----------------TRIDRA 249
             +    +   RFSPN + +A  +  D+ I+ VY +D                     R 
Sbjct: 67  MSNHSGTIHTVRFSPNGKYLA--SGADDKIVCVYTLDANPPTHSSTFGTDEAPPVENWRT 124

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS---------VDLQSNATERLTNT 300
            +R+    + +    +S +    L+SV  D  + ++S         + +  +  + +T  
Sbjct: 125 IRRLIGHDNDVQDLGWSFD-SSILVSVGLDSKVVVWSGHSFEKLKMIAIHQSHVKGITFD 183

Query: 301 LFINISASYSPDSSQIV--FES---DREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVW 354
                 A+ S D +  +  F S   +    + +       +     +     +YF    W
Sbjct: 184 PANKYFATASDDRTVRIFRFTSPAPNSSAHDHMNNFVLEQTITAPFANSPLTAYFRRCSW 243

Query: 355 SPQGDLIAFTK-FSGEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSP------------ 399
           SP G  IA     +G   ++ ++ +        L+  ++ ++  ++SP            
Sbjct: 244 SPDGMHIAAANAVNGPVSSVAIINRGSWDGDINLIGHEAPVEVCSFSPRLYATEPPNKKQ 303

Query: 400 -SGR-----SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY-----ASDPQWVG 444
             G+      +       GD    ++       N   I           SD  W  
Sbjct: 304 ADGQPVPQHHITVIACAGGDKSLSIWITS----NARPIVVAQEMAAKAISDLAWTP 355


>gi|172038494|ref|YP_001804995.1| WD-40 repeat-containing protein [Cyanothece sp. ATCC 51142]
 gi|171699948|gb|ACB52929.1| WD-40 repeat protein [Cyanothece sp. ATCC 51142]
          Length = 391

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/184 (12%), Positives = 55/184 (29%), Gaps = 14/184 (7%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           +          ++ +F +   A     NG   + S   +  +  +++  ++    + T  
Sbjct: 206 VWTLDPPHFLYQLEDFGTPGYALAMHPNG-FLVASGDDEGTVSFWNLRDKT-VVSKFTAH 263

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                  + +PD   ++  S       + +      +     +  +        SP G L
Sbjct: 264 SQTISGLAITPDQKTLITASH---DSTIKIWDLASGNLLDTWRGHKGKIQSIALSPNGKL 320

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ--APTWSPSGRSLIFSRKKDGDTGSKL 418
           +A     G    + +   +  +     +D         +SP G+ L        D    L
Sbjct: 321 LASASLDG----VRLWNVETGRLLRHFKDHADWVNVVAFSPDGQYLA---SGGFDKVVNL 373

Query: 419 YSID 422
           + I 
Sbjct: 374 WEIS 377



 Score = 36.5 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 30/88 (34%), Gaps = 5/88 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +    +++ + D    N+          +     SPN + +A A+ D      V L +  
Sbjct: 281 TASHDSTIKIWDLASGNLLDTWRGHKGKIQSIALSPNGKLLASASLDG-----VRLWNVE 335

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRAL 273
             R  +   +    +    FS +G+   
Sbjct: 336 TGRLLRHFKDHADWVNVVAFSPDGQYLA 363


>gi|156847160|ref|XP_001646465.1| hypothetical protein Kpol_1048p38 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117142|gb|EDO18607.1| hypothetical protein Kpol_1048p38 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 340

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 6/78 (7%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFI 303
           I +    +     +  +  FS +G +  I     + + +   D+ S    +  LT+ +  
Sbjct: 5   IGKISDLVHLTDGLSTSACFSPDGTKLAIV----DGLSVVIYDISSGEVFQTILTSHVKS 60

Query: 304 NISASYSPDSSQIVFESD 321
                +SPD   +   SD
Sbjct: 61  ISQVCWSPDGQCVATASD 78



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 62/189 (32%), Gaps = 15/189 (7%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR-APKRIGNFRSMILAPR 264
           L    D +     FSP+  K+A       D L V + D          + +    I    
Sbjct: 11  LVHLTDGLSTSACFSPDGTKLAIV-----DGLSVVIYDISSGEVFQTILTSHVKSISQVC 65

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +S +G+    +    +   I  + L       L       IS  Y+   + ++  S  + 
Sbjct: 66  WSPDGQCVATAS---DDFTINVLHLLYGQLYILMGHTAPVISLCYNSKGN-LLCSSSMDE 121

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-E 383
             +++    NG+  + IS   EA     + +    +++   F G    I +         
Sbjct: 122 SIKIWDT-LNGTLMRTISAHSEAVVSIDICTFDSSILSSGSFDG---LIRIFDTATGHCL 177

Query: 384 RLLVEDSNL 392
           + L  D + 
Sbjct: 178 KTLTYDKDW 186


>gi|298250895|ref|ZP_06974699.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
 gi|297548899|gb|EFH82766.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
           racemifer DSM 44963]
          Length = 356

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 32/83 (38%), Gaps = 5/83 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           +       I++   +SP+ + +A  + D      V + +T             + + A  
Sbjct: 278 FTYQGHTDIVYAVAWSPDGKWIASGSADK----TVQVWNTSDGSLAFTYQGHSNAVDAVA 333

Query: 265 FSSNGKRALISVQKDEAMDIYSV 287
           +S + KR   S   D+ + ++ +
Sbjct: 334 WSPDKKRIA-SGSADKTVQVWQM 355



 Score = 37.3 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 3/63 (4%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              I  + ++SPD   I   S     + + V  ++        Q    +     WSP   
Sbjct: 283 HTDIVYAVAWSPDGKWIASGS---ADKTVQVWNTSDGSLAFTYQGHSNAVDAVAWSPDKK 339

Query: 360 LIA 362
            IA
Sbjct: 340 RIA 342


>gi|289622218|emb|CBI51396.1| unnamed protein product [Sordaria macrospora]
          Length = 518

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 48/138 (34%), Gaps = 7/138 (5%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           +++  A+ D    + ++       +   R+   ++ +   +FS +G     SV  D ++ 
Sbjct: 374 ERIVSASDDF--TMYLWDPTNNGTKPVARLLGHQNKVNQVQFSPDGTLIA-SVGWDNSVK 430

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           +++        + L   +      S+S DS  ++  S       L               
Sbjct: 431 LWNA-RDGKFLKSLRGHVAPVYQCSWSADSRLLITASK---DTTLKAWNVRTGTLAMDLP 486

Query: 344 DKEASYFDPVWSPQGDLI 361
             E   +   WSP G ++
Sbjct: 487 GHEDEVYAVDWSPDGKMV 504



 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 55/138 (39%), Gaps = 10/138 (7%)

Query: 180 VSESVVSGIIKNSLCVMDR--DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
           V+E +VS     ++ + D   +G             + + +FSP+   +A   +D+    
Sbjct: 372 VAERIVSASDDFTMYLWDPTNNGTKPVARLLGHQNKVNQVQFSPDGTLIASVGWDN---- 427

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER- 296
            V L + R  +  K +    + +    +S++  R LI+  KD  +  +  ++++      
Sbjct: 428 SVKLWNARDGKFLKSLRGHVAPVYQCSWSAD-SRLLITASKDTTLKAW--NVRTGTLAMD 484

Query: 297 LTNTLFINISASYSPDSS 314
           L        +  +SPD  
Sbjct: 485 LPGHEDEVYAVDWSPDGK 502



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 37/295 (12%), Positives = 84/295 (28%), Gaps = 52/295 (17%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           ++AH I         G+           S  + +G   N+  + D +    ++       
Sbjct: 137 RLAHRIP------GHGQPILAAQFSPISSGRLATGSGDNTARIWDTNTGTPKHTLKGHTG 190

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS----- 267
            +    + P+ +++A  + D    +R++  +T      +        +L   +       
Sbjct: 191 WVLGVNWRPDGEQLATCSMD--GTVRIWDPETG-KAVGQPFKGHAKWVLMTAWQPYHLWK 247

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY---------SPDSSQIVF 318
           +G   + S  KD    I+ V+        L+          +         S D +  VF
Sbjct: 248 DGTPRIASCSKDGTCRIWVVN-TGRTENVLSGHKSSVACVRWGGTDLIYTGSHDKTIRVF 306

Query: 319 E--------SDREGKEQLYVMQSNGSDQKRISQDKEAS----------------YFDPVW 354
           +        S       +  +  +     R +     S                 F+   
Sbjct: 307 DAVKGTLVHSLTAHAHWINHIGLSSDHALRTAYFDHGSKDIPTTEEGKREKAKERFERAA 366

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWSPSGRSLI 405
              G +      + + F + +     +      RLL   + +    +SP G  + 
Sbjct: 367 KINGKVAERIVSASDDFTMYLWDPTNNGTKPVARLLGHQNKVNQVQFSPDGTLIA 421



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 68/223 (30%), Gaps = 18/223 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN-QQKVAYATYDDEDILRVYLMDT 244
           +G    ++ V D     + +   +    +     S +   + AY  +  +DI       T
Sbjct: 296 TGSHDKTIRVFDAVKGTLVHSLTAHAHWINHIGLSSDHALRTAYFDHGSKDIP-----TT 350

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRA--LISVQKDEAMDIYS-VDLQSNATERLTNTL 301
              +  K    F           NGK A  ++S   D  M ++   +  +    RL    
Sbjct: 351 EEGKREKAKERFERAA-----KINGKVAERIVSASDDFTMYLWDPTNNGTKPVARLLGHQ 405

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
                  +SPD + I           + +  +      +  +   A  +   WS    L+
Sbjct: 406 NKVNQVQFSPDGTLIA---SVGWDNSVKLWNARDGKFLKSLRGHVAPVYQCSWSADSRLL 462

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             T           ++       L   +  + A  WSP G+ +
Sbjct: 463 I-TASKDTTLKAWNVRTGTLAMDLPGHEDEVYAVDWSPDGKMV 504


>gi|290987596|ref|XP_002676508.1| predicted protein [Naegleria gruberi]
 gi|284090111|gb|EFC43764.1| predicted protein [Naegleria gruberi]
          Length = 871

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 78/215 (36%), Gaps = 32/215 (14%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ------SNATERLTNTLFINISASYSP 311
           SM+  P F       +          +Y V +       +    RL +T     +  Y  
Sbjct: 182 SMLGGPAFHPFKNEMIFVSSASGVYQLYKVGINRKKGKITGKPIRLVHTKSRCSAPRYLH 241

Query: 312 DSSQIVFESDREGKEQLYV-MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           D S + +  DR G E   + + +       +++D +A +     +   + + +   S  K
Sbjct: 242 DGSILYYH-DRGGNENFQIGLITPKGKHIWLTEDLKAKHLINRVT--KNYLYYQSNSRNK 298

Query: 371 --FAIG-----VMKKDGS---QERLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLY 419
             F +      ++ KDGS    ERL   +  +   T  S     L+  +K   +  ++L+
Sbjct: 299 KFFDLYRRPMPLVNKDGSLIKAERLYTPEVGIPRVTLVSSDETQLVIEQKYS-NIHNELF 357

Query: 420 SIDL-NGR----NETLINTPAYASDPQWVG--FMD 447
             DL +G      ++L+   A      W    F++
Sbjct: 358 LKDLVDGTLTPLTKSLVPGMAKVR---WSPLRFLN 389


>gi|228991331|ref|ZP_04151288.1| Peptidase S9B, dipeptidylpeptidase IV domain protein [Bacillus
           pseudomycoides DSM 12442]
 gi|228768394|gb|EEM17000.1| Peptidase S9B, dipeptidylpeptidase IV domain protein [Bacillus
           pseudomycoides DSM 12442]
          Length = 773

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 52/161 (32%), Gaps = 27/161 (16%)

Query: 265 FSSNGKRALIS-VQKDEAMDIYSV-DLQSNATERL----------TN------TLFINIS 306
           ++++      + + +D     + V + ++   + L          T+         IN+ 
Sbjct: 292 WTNDSDFVYFTKMSRDYRSMQFVVANAKTGEIQTLLEEKSETFLFTDLYNIKSGKGINVQ 351

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTK 365
             +    +  ++ S+R+G   LY+  S     K RI+              Q   + FT 
Sbjct: 352 --WLCHDNTFIWHSERDGWSHLYLYDSRTGRLKNRITSGSWTVRRLIGVDEQKSWVYFTA 409

Query: 366 ------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                        +  ++ DGS   LL  +        SP 
Sbjct: 410 SGREPGRDPYFQHLYRVRLDGSDLVLLTPEDAEHDVFISPD 450


>gi|329923876|ref|ZP_08279239.1| hypothetical protein HMPREF9412_2486 [Paenibacillus sp. HGF5]
 gi|328941049|gb|EGG37353.1| hypothetical protein HMPREF9412_2486 [Paenibacillus sp. HGF5]
          Length = 360

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 27/225 (12%), Positives = 75/225 (33%), Gaps = 21/225 (9%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +   V   + D+       L + +         + +S   +  +S +G+   +     
Sbjct: 116 SYHGGLVGLHSIDENGQAGKLLDEKKHADLVTVREDQQSRAHSAFYSPDGRYVFVQDLGL 175

Query: 280 EAMDIYSVD-----LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           + +  Y+V+     L  +   +L   +      ++ P  +     ++      +      
Sbjct: 176 DKILAYTVNENKQELSFHGETQLDAGVGP-RHLAFHPSGAYAYVINELNSSVTVLRYDQE 234

Query: 335 GSDQKRI--------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--- 383
               + +          D E+   +   S  G  +  +    +   +  + +D  +    
Sbjct: 235 AGRLEVLETVSTLPADFDGESYCAEIAVSADGKTVYGSNRGHDSIVVFNVHEDTGRLSPV 294

Query: 384 -RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGR 426
             +  E  + +  T  P G+ LI    +DG+    L++++  +G+
Sbjct: 295 QYISTEGGHPRHFTLMPGGKYLI-VANRDGN-NLVLFNVNPEDGK 337


>gi|195019084|ref|XP_001984905.1| GH16747 [Drosophila grimshawi]
 gi|193898387|gb|EDV97253.1| GH16747 [Drosophila grimshawi]
          Length = 652

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 57/144 (39%), Gaps = 11/144 (7%)

Query: 199 DGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           DG  ++ +         ++  +FSP+  K+A  + D   I+          +  + +   
Sbjct: 322 DGFPMQTIQVLTDHCDEVWFCKFSPDGLKLATGSKDSTVIIWDVDPYKLTLKHRRVLDGQ 381

Query: 257 RSMILA-PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPD 312
             + ++   +S + K  L+   +D + +++  ++       +  +  +  S    ++S D
Sbjct: 382 AQLNVSFVSWSPDSKLILVGGTED-SHELFIWNVDDGKLV-VKFSQSLEDSLACGTFSRD 439

Query: 313 SSQIVFESDREGKEQLYVMQSNGS 336
            +  V       K QLY+   NG+
Sbjct: 440 GNHFVCG---GQKGQLYLCDLNGT 460



 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 67/163 (41%), Gaps = 11/163 (6%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLF-IN 304
           +  + + +    +   +FS +G +   +  KD  + I+ VD    +    R+ +    +N
Sbjct: 327 QTIQVLTDHCDEVWFCKFSPDGLKLA-TGSKDSTVIIWDVDPYKLTLKHRRVLDGQAQLN 385

Query: 305 ISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDKEASYFDPVWSPQGDLIA 362
           +S  S+SPDS +++     E   +L++   +      + SQ  E S     +S  G+   
Sbjct: 386 VSFVSWSPDS-KLILVGGTEDSHELFIWNVDDGKLVVKFSQSLEDSLACGTFSRDGNHFV 444

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                G+K  + +   +G+      E   + +  +    ++++
Sbjct: 445 ---CGGQKGQLYLCDLNGTLIDSW-EGVRVNSVAFRADNKTIL 483


>gi|189515588|ref|XP_001922908.1| PREDICTED: fizzy-related protein homolog isoform 1 [Danio rerio]
          Length = 489

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/253 (11%), Positives = 79/253 (31%), Gaps = 19/253 (7%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            + D      +     +N R   V+     G  K  + + D  G             +  
Sbjct: 218 RLCDLSVDGDSVTSVCWNERGSLVAV----GTHKGFVQIWDAAGGRKLTSLEGHSARVGA 273

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +  N +++   +    D + +           +R+   R  +   ++S + +      
Sbjct: 274 LAW--NGEQL---SSGSRDRVILQRDVRTPPPVERRLQGHRQEVCGLKWSPDHQHLA--- 325

Query: 277 QKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                 D   +   S++    ++ ++ L    + ++SP    ++  S     ++     +
Sbjct: 326 --SGGNDNKLLVWNSSSLLPVQQYSDHLAAVKAIAWSPHQHGLL-ASGGGTADRCLRFWN 382

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVEDSNL 392
             + Q   S D  +   +  WS   + +  T  +S  +  +          +L      +
Sbjct: 383 TLTGQALQSTDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRV 442

Query: 393 QAPTWSPSGRSLI 405
                SP G +++
Sbjct: 443 LYLAVSPDGEAIV 455


>gi|150025185|ref|YP_001296011.1| Xaa-Pro dipeptidyl-peptidase [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771726|emb|CAL43200.1| Xaa-Pro dipeptidyl-peptidase [Flavobacterium psychrophilum
           JIP02/86]
          Length = 710

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 74/244 (30%), Gaps = 45/244 (18%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYD------------------------------- 232
           + +  S   I     +SP    +A+   D                               
Sbjct: 177 QTIARSEFGISGGIFWSPKSTYLAFYQKDETNVADYPLLDITQTPGKLESIKYPMIGQKS 236

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--QKDEAMDIYSVDLQ 290
           ++  + VY + T         GN    +    +S + K  LI+   +    M++   D  
Sbjct: 237 EKPRVGVYNLATSKTVFILPKGNPEDYLTNLSWSPDEKYILIAEVNRAQNDMNLNVYDAN 296

Query: 291 SNATER-LTNTLFINI----SASYSPDSSQ--IVFESDREGKEQLYVMQSNGSDQKRISQ 343
           S    R + N          +A++ P+S     V+ S+++G   LY     G   K+++ 
Sbjct: 297 SGTFVRTILNEKSNKWVEPENAAFFPNSKSNNFVWISEKDGFNNLYYYTIEGKLIKKLTS 356

Query: 344 DKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA-PTWSPS 400
           +          +  G  I F  T  +        +   G Q  +  E       P +   
Sbjct: 357 NLFPVREIISTNTAGTEIYFKATGENATNMLAYKVDLKGKQTLITKEFGVHTVIPNF--D 414

Query: 401 GRSL 404
           G  +
Sbjct: 415 GSFI 418


>gi|114569429|ref|YP_756109.1| oligopeptidase B [Maricaulis maris MCS10]
 gi|114339891|gb|ABI65171.1| oligopeptidase B, Serine peptidase, MEROPS family S09A [Maricaulis
           maris MCS10]
          Length = 756

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 74/227 (32%), Gaps = 28/227 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----FRSMILAPRF----------SS 267
           +     Y  Y +     V+          + +G+          A  F          S 
Sbjct: 142 DGDYAYYTRYREGGQYPVFARRPVNPETGEPMGDEEVLVDGDAEAADFDYLDFSDMEHSP 201

Query: 268 NGKRALI--SVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFES--DR 322
           + +       V+  E  +I   D+ + A    LT+    +   +++ DS+ + +    D 
Sbjct: 202 DHRYVAFGVDVRGSEYYEIRVKDVATGAIVATLTDESSGDF--TWANDSATLYWVWRDDN 259

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMKK-DG 380
              +++Y   +NG   + + ++ +  +F  V  S   + I           + ++   D 
Sbjct: 260 GRSKRVYRQPANGGPSELVYEEPDDGFFVSVGLSDNNNHIVINAGGHTSNEMRLIDANDP 319

Query: 381 SQERLLVEDSNLQAPTW---SPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           + E +L+         +   +       F    DG    K+ S  L+
Sbjct: 320 AAEPVLIAAREDDVEYYLTEASD--RFYFRTNIDGAVDYKIMSAPLD 364



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 45/145 (31%), Gaps = 17/145 (11%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLY----VMQSNGSDQ---KRISQDKEASYFDPVW-- 354
           + S+    D     +   REG +        +     +    + +  D +A   D  +  
Sbjct: 134 DDSSVPERDGDYAYYTRYREGGQYPVFARRPVNPETGEPMGDEEVLVDGDAEAADFDYLD 193

Query: 355 ------SPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                 SP    +AF       E + I V           + D +    TW+    +L +
Sbjct: 194 FSDMEHSPDHRYVAFGVDVRGSEYYEIRVKDVATGAIVATLTDESSGDFTWANDSATLYW 253

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLI 431
             + D     ++Y    NG    L+
Sbjct: 254 VWRDDNGRSKRVYRQPANGGPSELV 278


>gi|68470502|ref|XP_720755.1| hypothetical protein CaO19.11797 [Candida albicans SC5314]
 gi|46442639|gb|EAL01927.1| hypothetical protein CaO19.11797 [Candida albicans SC5314]
          Length = 838

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 21/103 (20%)

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + +D+ +   + + N +    +AS+SPDSS+I F  +      LY       +  +I+ D
Sbjct: 198 WVLDINNGDIKPVFNDVDKISTASWSPDSSKIAFIYE----NNLYYKSLQHDEIVQITFD 253

Query: 345 KEASYFDPV-----------------WSPQGDLIAFTKFSGEK 370
                F+                   WSP+ D +AF + +  +
Sbjct: 254 GSTEIFNGKPDWVYEEEVYGSDHVFWWSPESDKVAFLRSNNTQ 296


>gi|68470765|ref|XP_720628.1| hypothetical protein CaO19.4322 [Candida albicans SC5314]
 gi|46442505|gb|EAL01794.1| hypothetical protein CaO19.4322 [Candida albicans SC5314]
          Length = 838

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 21/103 (20%)

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + +D+ +   + + N +    +AS+SPDSS+I F  +      LY       +  +I+ D
Sbjct: 198 WVLDINNGDIKPVFNDVDKISTASWSPDSSKIAFIYE----NNLYYKSLQHDEIVQITFD 253

Query: 345 KEASYFDPV-----------------WSPQGDLIAFTKFSGEK 370
                F+                   WSP+ D +AF + +  +
Sbjct: 254 GSTEIFNGKPDWVYEEEVYGSDHVFWWSPESDKVAFLRSNNTQ 296


>gi|294142480|ref|YP_003558458.1| hypothetical protein SVI_3709 [Shewanella violacea DSS12]
 gi|293328949|dbj|BAJ03680.1| hypothetical protein [Shewanella violacea DSS12]
          Length = 348

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 46/105 (43%), Gaps = 8/105 (7%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +    +++ +P  ++     +  +Q D+    + +       + ++N    +   ++S 
Sbjct: 39  LLALSTTLVTSPAIAAGYDIWIYPLQLDKQTSNWQL----GIGKPISNRDGYDNQPAFSA 94

Query: 312 DSSQIVFESDREGK----EQLYVMQSNGSDQKRISQDKEASYFDP 352
           DS  +VF SDR G+     + Y+ ++     ++++   + S + P
Sbjct: 95  DSQSLVFASDRGGEHNDIFEYYLAKNASPQIRQLTFTADESEYSP 139


>gi|307151808|ref|YP_003887192.1| hypothetical protein Cyan7822_1933 [Cyanothece sp. PCC 7822]
 gi|306982036|gb|ADN13917.1| conserved hypothetical protein [Cyanothece sp. PCC 7822]
          Length = 496

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 51/320 (15%), Positives = 100/320 (31%), Gaps = 67/320 (20%)

Query: 170 KGDFNSRIL--FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
           +G F  R L  +  E+ V G  K++L         +  +  ++D    +   + + + V 
Sbjct: 199 RGSFGIRELQLYTVETAVQGQDKSNLLP------KMELVLDNKDYQNNQFDLASDGKTVV 252

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
               + E+     L    +   P+R+       L    + +G+   ++    +   I  +
Sbjct: 253 IQRVNRENPADFDLWKLTLGSKPERLNVSGGDFL---ITPDGQTVAVA----QGQGIALI 305

Query: 288 DLQSNATERLTNTLFINISA------SYSPDSSQIV---FESDREGKEQL---YVMQSNG 335
            LQ       T++             ++S D        F +D      +   Y + + G
Sbjct: 306 PLQ-------THSQTPEFLPKFGQVLNFSRDGKAAAMVNFNTDNAKLRYIRSLYYVNNQG 358

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-------MKKDGSQERLLVE 388
             ++ +    E S  D  +SP G  +             V       +  +  Q   LV 
Sbjct: 359 IQKELL--KVEGSIIDCQFSPNGTALYCLLTQLLNKDEYVEQPYFVKIDLESGQVLPLVS 416

Query: 389 --DSNLQAPTWSPSGRSLIF--------------SRKKDGDT--GSKLYSI------DLN 424
             D      + +P G  ++F                   G+   GS+L+ +       + 
Sbjct: 417 LPDYRDIQISLAPDGLGILFDQLITRSTPTPNDLLTSDSGEAIVGSRLWLLIPPNGKPVK 476

Query: 425 GRNETLINTPAYASDPQWVG 444
           G    L   P     PQW  
Sbjct: 477 GSKPELEVLPLVGFHPQWSP 496


>gi|71906642|ref|YP_284229.1| YVTN beta-propeller repeat-containing protein [Dechloromonas
           aromatica RCB]
 gi|71846263|gb|AAZ45759.1| 40-residue YVTN beta-propeller repeat [Dechloromonas aromatica RCB]
          Length = 312

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 66/198 (33%), Gaps = 17/198 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S + + +A A  DD     V L+     +   RI           FS +G+   +S ++ 
Sbjct: 101 SADGKLLAVAVEDDN---AVVLLAAPQGKELARIKVQGKNPEHAVFSPDGRWLYVSAEEA 157

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGS 336
           E +D   VD+ +        ++ +        + PD S+    S+  GK    V   + +
Sbjct: 158 EQVD--VVDVAARQQV---ASIPVGKRPRGIGFLPDGSRAYVASEMAGK----VYAIDVA 208

Query: 337 DQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            +  I++     Y       P G  + F     +   + +     +    +         
Sbjct: 209 QRSVIAEIAAGQYPNGIAVHPDGQRV-FVSNGRDGSVMAIDVASNTVIATIEVGKRPWNM 267

Query: 396 TWSPSGRSLIFSRKKDGD 413
             +P G  L  +  + G 
Sbjct: 268 AITPDGSKLYVANGRSGT 285



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 68/179 (37%), Gaps = 17/179 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP+ + + Y + ++ + + V  +  R   A   +G     I    F  +G RA ++ + 
Sbjct: 143 FSPDGRWL-YVSAEEAEQVDVVDVAARQQVASIPVGKRPRGIG---FLPDGSRAYVASEM 198

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQSNGSD 337
                +Y++D+   +              +  PD  Q VF S+ R+G     VM  + + 
Sbjct: 199 AG--KVYAIDVAQRSVIAEIAAGQYPNGIAVHPDG-QRVFVSNGRDGS----VMAIDVAS 251

Query: 338 QKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              I + +     ++   +P G  +          ++     D +  R L + +  + P
Sbjct: 252 NTVIATIEVGKRPWNMAITPDGSKLYVANGRSGTVSV----IDTAAYRKLADIAVGELP 306



 Score = 40.4 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 59/158 (37%), Gaps = 9/158 (5%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           + +   +RL++ L +          S  ++ +D      L ++ +     ++  +  ++ 
Sbjct: 38  IDTGTDQRLSD-LAVGQRPRGIAAGSGHLYLTD-GKTGSLLIVDTTAGKLEKSVRLGDSP 95

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
                 S  G L+A          +    +     R+ V+  N +   +SP GR L  S 
Sbjct: 96  E-GISLSADGKLLAVAVEDDNAVVLLAAPQGKELARIKVQGKNPEHAVFSPDGRWLYVSA 154

Query: 409 KKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFM 446
           ++          +D+  R + + + P     P+ +GF+
Sbjct: 155 EEAEQVD----VVDVAAR-QQVASIPVGKR-PRGIGFL 186


>gi|317127575|ref|YP_004093857.1| cell surface glycoprotein [Bacillus cellulosilyticus DSM 2522]
 gi|315472523|gb|ADU29126.1| cell surface glycoprotein [Bacillus cellulosilyticus DSM 2522]
          Length = 398

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/234 (12%), Positives = 78/234 (33%), Gaps = 30/234 (12%)

Query: 220 SPNQQKVAYATYDDEDILRVYL------MDTRIDRAPKRIGNFRSMILAP-------RFS 266
           SP+ ++V  A    + +  + +                 +   +     P       +++
Sbjct: 146 SPDGERVLVANTPGQSMTEILIDKDNEEFTVGRHIDLTEVEALQDEEEFPNQRPICLQYT 205

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-----YSPDSSQIVFESD 321
           ++G +A +++       ++ +D+ S     +       + A       SPD S +   S 
Sbjct: 206 ADGSKAYVTL---GGGGLFVLDVASFEV--IAQFGKSQVGAHGCGTILSPDGSHMFANSG 260

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                + YV+     +     +          ++P G+ +       +  AI  +    S
Sbjct: 261 STELAEYYVIDVETDEIIYTGETGGIDAHGVAFTPDGEHLWMVNRVTDDGAI--IDPV-S 317

Query: 382 QERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
            E +   +   +AP    +SP G+   +   +  +  +  + +  +     +I+
Sbjct: 318 FEVVDHIEFVGEAPDLLVFSPDGKY-AYISLRGPEPATGTHDMAGDTPGVAVID 370



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/133 (15%), Positives = 47/133 (35%), Gaps = 19/133 (14%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
              V+D +   I Y   +         F+P+ + +       +D   +  +   +    +
Sbjct: 266 EYYVIDVETDEIIYTGETGGIDAHGVAFTPDGEHLWMVNRVTDDGAIIDPVSFEVVDHIE 325

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQK-----------DEAMDIYSVDLQSNATERLTNT 300
            +G    +++   FS +GK A IS++             +   +  +D+++    +L   
Sbjct: 326 FVGEAPDLLV---FSPDGKYAYISLRGPEPATGTHDMAGDTPGVAVIDVETKTKVKL--- 379

Query: 301 LFINISASYSPDS 313
             I +  S  P  
Sbjct: 380 --IEMDLSGDPHG 390


>gi|228472045|ref|ZP_04056813.1| hypothetical protein CAPGI0001_0584 [Capnocytophaga gingivalis ATCC
           33624]
 gi|228276657|gb|EEK15370.1| hypothetical protein CAPGI0001_0584 [Capnocytophaga gingivalis ATCC
           33624]
          Length = 362

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 54/177 (30%), Gaps = 25/177 (14%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------FSSNGKRAL 273
           SP+++ VA                     + + +  F  +   P       +SS G    
Sbjct: 142 SPDERFVAVQAKKSTGYNNDNPASILDMSSGRLLKEFNIVGYEPHRINIVGWSSAG-ELF 200

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQ 332
           +SV  +        D      ++L    F +I   + +P  +Q VF   R G + +++  
Sbjct: 201 LSVDNELIKASERNDWSMTYVKKL---PFDDIEMLNMNPQGTQFVF---RRGDKHIWLYD 254

Query: 333 SNGSDQKRISQDK-----------EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                  +++  K                 P +SP G  IAFT              
Sbjct: 255 IQEDSHYQVTTSKVDGITDARTYYSGGERLPSFSPDGKYIAFTGQPRHSAVPYAYDP 311


>gi|156542769|ref|XP_001602731.1| PREDICTED: similar to wd-repeat protein isoform 3 [Nasonia
           vitripennis]
          Length = 513

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 57/177 (32%), Gaps = 17/177 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +   ++ P    +A  + D      + +   + D     +      I   ++S
Sbjct: 343 FQGHTNEVNAIKWDPQGNLLASCSDDM----TLKIWSMKQDTCLHDLQAHSKEIYTIKWS 398

Query: 267 SNG--------KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             G           L+S   D  + ++ +D +      LT       S ++SPD   +  
Sbjct: 399 PTGPGTLNPNMNLTLVSASFDSDVRLWDID-RGACIYTLTQHTEPVYSVAFSPDGKFLAS 457

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            S     + +++  +        S       F+  W+ +GD +  +   G  F + +
Sbjct: 458 GSF---DKYVHIWSTQSGQLVH-SYKGTGGIFEVCWNSRGDKVGASASDGSVFVLDL 510


>gi|156542767|ref|XP_001602755.1| PREDICTED: similar to wd-repeat protein isoform 4 [Nasonia
           vitripennis]
          Length = 519

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 57/177 (32%), Gaps = 17/177 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +   ++ P    +A  + D      + +   + D     +      I   ++S
Sbjct: 349 FQGHTNEVNAIKWDPQGNLLASCSDDM----TLKIWSMKQDTCLHDLQAHSKEIYTIKWS 404

Query: 267 SNG--------KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             G           L+S   D  + ++ +D +      LT       S ++SPD   +  
Sbjct: 405 PTGPGTLNPNMNLTLVSASFDSDVRLWDID-RGACIYTLTQHTEPVYSVAFSPDGKFLAS 463

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            S     + +++  +        S       F+  W+ +GD +  +   G  F + +
Sbjct: 464 GSF---DKYVHIWSTQSGQLVH-SYKGTGGIFEVCWNSRGDKVGASASDGSVFVLDL 516


>gi|89519304|gb|ABD75782.1| putative outer membrane-related protein [uncultured bacterium]
          Length = 540

 Score = 45.4 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 31/212 (14%), Positives = 73/212 (34%), Gaps = 29/212 (13%)

Query: 255 NFRSMILAPRFSSNGKRALISV--------QKDEAMDIYSVDLQSNATERL--TNTLFIN 304
           +F        FS + +    +           ++  ++  +D +++  ++L  T      
Sbjct: 146 DFPYSPAGMSFSRDYRTVYFTRPEEISGQRTVEKIFEMRIIDGKASEQQQLQFTTDASRY 205

Query: 305 ISASYSPDSSQIVFESDR----EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP--QG 358
           +  + S D S +VF SDR     G +     ++       ++  +  +     W P    
Sbjct: 206 LHPAISQDDSIMVFSSDRNPTSGGLDLFVTRKTPAGWSDPVNLGRGINTSGHEWYPFLDH 265

Query: 359 DLIAFTKFSG----EKFAIGVMKKDGSQ-------ERLLVEDSNLQAPTWSPSGRSLIFS 407
               +   SG      + + V   DGS          ++    +    +  P  +  IF+
Sbjct: 266 RKNLYFSSSGHKGKGGYDVYVCFFDGSGWSEPHNLTEVVNTPGDEFGFSIRPGNKLAIFT 325

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           R  +  +   + ++ LN  ++ +    +  SD
Sbjct: 326 RIMNSASKGVVLTLKLN--DKAIPAGNSENSD 355


>gi|330974100|gb|EGH74166.1| oligopeptidase B [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 686

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 57/170 (33%), Gaps = 15/170 (8%)

Query: 262 APRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF- 318
           A   S + +R   S+    DE  ++Y  +L +     L      + S +++ DS  + F 
Sbjct: 132 AFSISPDHQRLAYSLDTSGDEIYELYVKELSTGQISSLPF-KNCDGSMTWANDSQTLFFG 190

Query: 319 ---ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIG 374
              E+ R GK  L+      +  +++  + +  +F   + S     +     S       
Sbjct: 191 ELDETHRPGK--LHRHTLGTASAEQVFDEPDGRFFLHCFRSSSERQLIILLNSKTTSEAW 248

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPS-----GRSLIFSRKKDGDTGSKLY 419
           V+  D  Q+         +   + P      G    F R         LY
Sbjct: 249 VLDADHPQQAFTCLAPRSEGHEYYPDHGLLNGVWTWFIRSNQSGINFALY 298


>gi|307105512|gb|EFN53761.1| hypothetical protein CHLNCDRAFT_9620 [Chlorella variabilis]
          Length = 307

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 52/160 (32%), Gaps = 10/160 (6%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+      A+ D     RV+ +D   D     +      +   RF  +GKR  ++   D 
Sbjct: 25  PSGTDAVTASSD--GTARVWDLDIG-DCCMGVMAGHTGWVHLIRFLPDGKR-AVTASHDG 80

Query: 281 AMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              ++  DL + +    L        S   S D       S+        +      D +
Sbjct: 81  TARVW--DLHTGSCRHELAGHAGRINSLVVSADGKWCATGSE---DCTARIWDLRRGDCR 135

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           R+    ++  +D   SP  D +  T   G   A  +   D
Sbjct: 136 RVLTGHKSWVYDVCISPAHDKLLTTSGDGTTMAYSLESGD 175


>gi|297789281|ref|XP_002862623.1| hypothetical protein ARALYDRAFT_497382 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297308260|gb|EFH38881.1| hypothetical protein ARALYDRAFT_497382 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 378

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 82/235 (34%), Gaps = 48/235 (20%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALI 274
            +SP+   VA       +  +V++  +      +R+        ++    +SS   + + 
Sbjct: 17  AWSPDHSMVALC----PNNTQVHIYKSSSLDQWERLHVLQKHDQIVSGIDWSSKSNKIV- 71

Query: 275 SVQKDEAMDIYSVDLQSNATE------RLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           SV  D    ++S+D             RL N   + +   +SP  ++    S   G + +
Sbjct: 72  SVSHDRNSYVWSLD--GGEWVPTLVILRL-NRAALCVQ--WSPKENKFAVGS---GAKTV 123

Query: 329 YVMQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGS- 381
            +      +     K I +  E+S     W P   L+A T   G    F+  +   D   
Sbjct: 124 CICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNILLATTSTDGKCRVFSTFIKGVDTKD 183

Query: 382 -----------QERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                       E++L  D   S      WSPSG +L +         S +Y +D
Sbjct: 184 SKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYV-----GHSSMIYFVD 233



 Score = 40.0 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 74/233 (31%), Gaps = 26/233 (11%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H  ++ I  +      D +   L  + + V     +SL     D     ++    DQI+ 
Sbjct: 7   HRFAESI--TCHAWSPDHSMVALCPNNTQVHIYKSSSL-----DQWERLHVLQKHDQIVS 59

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN------- 268
              +S    K+   ++D      V+ +D         I       L  ++S         
Sbjct: 60  GIDWSSKSNKIVSVSHDRNS--YVWSLDGGEWVPTLVILRLNRAALCVQWSPKENKFAVG 117

Query: 269 --GKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDRE 323
              K   I   + E     S  ++      +T+        + A+ S D    VF +  +
Sbjct: 118 SGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNILLATTSTDGKCRVFSTFIK 177

Query: 324 G-----KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           G      +     ++   +Q        +  F   WSP G+ +A+   S   +
Sbjct: 178 GVDTKDSKAGSPAETKFGEQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIY 230


>gi|294508791|ref|YP_003572850.1| dipeptidyl peptidase IV [Salinibacter ruber M8]
 gi|294345120|emb|CBH25898.1| dipeptidyl peptidase IV [Salinibacter ruber M8]
          Length = 883

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 88/291 (30%), Gaps = 53/291 (18%)

Query: 183 SVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            +     K      + DG    + +      ++   +  ++ + ++ A    D  D+  +
Sbjct: 276 RLTEDGEKYYSYAANNDGRGKTDTKKQEEKGERKAVDISWAKDSRRFALVRSDLRDVEEL 335

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +++    +  P+       M                       +++  DL++    R+ +
Sbjct: 336 WVVHATGNDRPELETFKYPMPGEDSV--------------GRDELWIYDLEAMEKTRVAD 381

Query: 300 TLFINISASYSPD----------SSQIVFES-------------DREGKEQLYVMQSNGS 336
           T + + S S   D            + V+ S             DR  K  L V  +   
Sbjct: 382 TGWTDQSLSILDDRQFRYPGSEAPRRRVWLSEGSDALWYERHSRDRT-KADLVVADAETG 440

Query: 337 DQKRISQDKEASYFDPVWSP----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           + +R   ++  + +     P     GD + +         +     DG+ E  L E    
Sbjct: 441 EIERTVVEERFNKYFHTQRPELLSNGD-VLWLSERDGWSHLYRYGSDGTVEAQLTEGDWH 499

Query: 393 QAPTWSPSGRS-LIFSRKKDGDTGSK-----LYSIDLNGRNETLINTPAYA 437
                +      + +      + G       LY + L+G    L+N P  A
Sbjct: 500 VDAVKAVDEEEGVAYVSGNGREAGEDPYYDHLYRVQLDGSGVELLN-PGDA 549



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 85/245 (34%), Gaps = 30/245 (12%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +         +SR   +  S +  +    L V+   G +   L   +  +  E     ++
Sbjct: 308 RKAVDISWAKDSRRFALVRSDLRDVE--ELWVVHATGNDRPELETFKYPMPGEDSVGRDE 365

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM----ILAPR---FSSNGKRALIS- 275
             +    YD E + +  + DT        I + R        APR   + S G  AL   
Sbjct: 366 LWI----YDLEAMEKTRVADTGWTDQSLSILDDRQFRYPGSEAPRRRVWLSEGSDALWYE 421

Query: 276 --VQKDEAMDIYSVDLQSNATER-----LTNTLFINISASYSPDSSQIVFESDREGKEQL 328
              +     D+   D ++   ER       N  F         +   +++ S+R+G   L
Sbjct: 422 RHSRDRTKADLVVADAETGEIERTVVEERFNKYFHTQRPELLSNGD-VLWLSERDGWSHL 480

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKDGS 381
           Y   S+G+ + ++++             + + +A+   +G +         +  ++ DGS
Sbjct: 481 YRYGSDGTVEAQLTEGDWHVDAVKAV-DEEEGVAYVSGNGREAGEDPYYDHLYRVQLDGS 539

Query: 382 QERLL 386
              LL
Sbjct: 540 GVELL 544


>gi|291455190|ref|ZP_06594580.1| aminopeptidase [Streptomyces albus J1074]
 gi|291358139|gb|EFE85041.1| aminopeptidase [Streptomyces albus J1074]
          Length = 663

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 67/210 (31%), Gaps = 23/210 (10%)

Query: 254 GNFRSMILAPRFSSNGKRALISV-------QKDEAMDIYSVDLQS--NATERLTNTLFIN 304
            +    +  PR S +G+RA+               + I  V  +        L      +
Sbjct: 186 TDRHRFVTGPRLSPDGQRAVWIAWDHPRMPWDGTELKIAEVTAEGPFTGVRTLIGGPEES 245

Query: 305 I-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDPVW-SP- 356
           +  A ++ D S I    DR G   L+ +     + K +                 W +P 
Sbjct: 246 VCQAEWASDGSLIAAT-DRSGWWNLHRVDPATGEAKPLCPREEEFGGPLWRIGSRWFAPM 304

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-TG 415
           +  LIA     G    +G++  D  +           A      G  +  +    G  + 
Sbjct: 305 ENGLIAVVHGRGST-RLGILDPDAGEICDAAGPWTTWAACLDVRGSRV--TGVAAGPLSA 361

Query: 416 SKLYSID-LNGRNETLINTPAYASDPQWVG 444
           +++  +D + GR   +      A DP ++ 
Sbjct: 362 AEIVELDTVTGRARVVAARHTDAVDPAYLP 391



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 36/103 (34%), Gaps = 9/103 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV--------YLMDTRIDRAPKRIG 254
           +R L   R + +  PR SP+ Q+  +  +D   +              +         IG
Sbjct: 181 VRELDTDRHRFVTGPRLSPDGQRAVWIAWDHPRMPWDGTELKIAEVTAEGPFTGVRTLIG 240

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                +    ++S+G     +  +    +++ VD  +   + L
Sbjct: 241 GPEESVCQAEWASDGSLIA-ATDRSGWWNLHRVDPATGEAKPL 282



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 78/276 (28%), Gaps = 40/276 (14%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG          D     PR +   ++       D     V            R+  +  
Sbjct: 27  DGRPDSVAHVGDDLWWTAPRPAEGGRRTLVRRRPDGTEESVL---PAPWNVRSRVVEYGG 83

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV- 317
              A     +G   +     D+ +  Y  D        LT    +     ++    Q+  
Sbjct: 84  EPWAGVPGPDGPLVVFVHFADQRLYAYEPDRPEAGPRPLTPLSGVGGGLRWADPVVQVAT 143

Query: 318 ---------FESDREGKEQLYVMQS----NGSDQ------KRISQDKEASYFDPVWSPQG 358
                    F    EG   +  + +    +GS        + +  D+      P  SP G
Sbjct: 144 GEVWCVLEEFTG--EGPTDVRRVPAAVPLDGSAAENRDAVRELDTDRHRFVTGPRLSPDG 201

Query: 359 D---LIAFTK----FSGEKFAIGVMKKDG--SQERLLVEDS--NLQAPTWSPSGRSLIFS 407
                IA+      + G +  I  +  +G  +  R L+     ++    W+  G  +  +
Sbjct: 202 QRAVWIAWDHPRMPWDGTELKIAEVTAEGPFTGVRTLIGGPEESVCQAEWASDGSLIA-A 260

Query: 408 RKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQW 442
             + G     L+ +D   G  + L         P W
Sbjct: 261 TDRSG--WWNLHRVDPATGEAKPLCPREEEFGGPLW 294


>gi|308081514|ref|NP_001183382.1| hypothetical protein LOC100501797 [Zea mays]
 gi|238011146|gb|ACR36608.1| unknown [Zea mays]
          Length = 657

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 36/262 (13%), Positives = 75/262 (28%), Gaps = 19/262 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                +G  +        +G     L       ++   FSP    +            + 
Sbjct: 375 RSQGENGPSQGERISTLDEGKRTYTLFQGHSGPVYSAAFSPFGDFL----LSSSSDSTIR 430

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L  T+++            +   +FS  G     S   D    I+S+D       R+   
Sbjct: 431 LWSTKLNANLVCYKGHNYPVWDVQFSPVGHYFA-SASHDRTARIWSMDKI--QPLRIMAG 487

Query: 301 LFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              ++    +  + + I   S     + + +      +  R+     +       SP G 
Sbjct: 488 HLSDVDCVQWHVNCNYIATGSS---DKTVRLWDVQTGECIRMFIGHRSMVLSLAMSPDGR 544

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            +A     G    I +      +    LL   S +    +S  G  L        D   K
Sbjct: 545 YMASGDEDGT---IMIWDLSTGRCVSPLLGHSSCVWTLAFSCEGALLA---SGSADCTVK 598

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           L+ +  + +     +T   +++
Sbjct: 599 LWDVASSTKTLKTEDTKGSSAN 620



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 50/150 (33%), Gaps = 8/150 (5%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            ++ +   V     S     +  +   D      +       +   ++  N   +A  + 
Sbjct: 450 VWDVQFSPVGHYFASASHDRTARIWSMDKIQPLRIMAGHLSDVDCVQWHVNCNYIATGSS 509

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D      V L D +     +     RSM+L+   S +G+    S  +D  + I+  DL +
Sbjct: 510 DK----TVRLWDVQTGECIRMFIGHRSMVLSLAMSPDGRYMA-SGDEDGTIMIW--DLST 562

Query: 292 NA-TERLTNTLFINISASYSPDSSQIVFES 320
                 L        + ++S + + +   S
Sbjct: 563 GRCVSPLLGHSSCVWTLAFSCEGALLASGS 592


>gi|198436982|ref|XP_002121522.1| PREDICTED: similar to WD repeat and SOCS box-containing 1 [Ciona
           intestinalis]
          Length = 408

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 63/194 (32%), Gaps = 19/194 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           +  +  DG N+       +  +     SPN   +  +    + +    L   R  +  + 
Sbjct: 174 VWDLGEDG-NMSLTIKGHNSPIHYLALSPNDPSILASVGMGKAVYLWKLPHKRTYKKLRL 232

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN------------- 299
           +    + +++  +S +G  AL++    +   I       +    L +             
Sbjct: 233 LRGHNNDVVSCSWSPDG--ALLATASHDTTVIVWEPFSGDQILVLGHLFPMPSPIYVGGS 290

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                 S  +S D ++I      + + +++      +     +  KE   +    SP G 
Sbjct: 291 NGAWVKSVCFSKDGTKIA-TVCEDNRIRVWKPWLQDTSMLENTIPKEG--YQCRISPDGC 347

Query: 360 LIAFTKFSGEKFAI 373
           +IA  K  G    I
Sbjct: 348 IIAVGKQDGSVTMI 361


>gi|168698563|ref|ZP_02730840.1| WD-40 repeat [Gemmata obscuriglobus UQM 2246]
          Length = 668

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 47/332 (14%), Positives = 98/332 (29%), Gaps = 64/332 (19%)

Query: 127 EFRLWDVKDRKQ----IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           + ++WDV   ++      G+ +  +   +      ++ D      G   D  ++    S 
Sbjct: 184 QIQVWDVATGRERYLLDTGETYAGTVVFFSDSTRVVAVD--GDGHGVIWDLGTKKKVCSL 241

Query: 183 SVVSGIIKNSLCVMDRDG---ANIRYLTP-------------SRDQILFEPRFSPNQQ-- 224
             V G  +       RDG   AN+                  +       P   P  +  
Sbjct: 242 ETVVGAARPVSWTFSRDGKWVANLESSGRVLVWDAATGKHRAAHAPPELPPAIVPRGKLL 301

Query: 225 --KVAYATYDD-----EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
              + Y               V   D    R    +  + S+ L  RF+ +GK   +++ 
Sbjct: 302 GDAIEYTPDGRLTGLGRWGEAVATWDAEQGRFLTPVSGYPSLPLTMRFAPDGKSLYLAMA 361

Query: 278 KDEAMDIYSVDLQSNATERLTNTL------FINISA--SYSPDSSQIVFESDREGKEQLY 329
              +   ++  L       ++         F++     + SPD    V            
Sbjct: 362 GIASPLNWT--LSGGEPTVVSIRPRDLPSEFVDDGFVEAISPDCRTFVLGRAGRWGGSAL 419

Query: 330 VMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFA---------IGVMKK 378
           +         + ++  + E S    V+SP G+ +      G  +          + +   
Sbjct: 420 ICDLKTGRVLQKTEPVNLERSDERTVYSPTGEFLV----RGGSYRWEKGAPPTYLPLFDV 475

Query: 379 DGSQERLLVEDSNLQAPT-----WSPSGRSLI 405
              ++   V+   ++ P      +SP G  LI
Sbjct: 476 KTGKQ---VKSPEVEVPERAVCGFSPDGSRLI 504


>gi|145349146|ref|XP_001419001.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144579231|gb|ABO97294.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 878

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 72/241 (29%), Gaps = 49/241 (20%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL--------RVYLMDTRIDRAPKR 252
               ++       +F    +P+  + A A  D +  +        R    D    +    
Sbjct: 5   YKPEFVAHDGTAPIFSVDAAPDGSRFATAGGDQKVKVWALAPVLEREIEADENAPKCLAT 64

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV----------DLQSNATERLT---- 298
           + +    +   RFS NG+    S   D ++ +Y++             +   E  T    
Sbjct: 65  LSDHFGPVNCVRFSRNGRYLA-SGSTDTSVLVYALREGPGKAAFGSADAPNVENWTIAAR 123

Query: 299 -NTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                 ++   ++SPD S +   S       + +      +     +   +      W P
Sbjct: 124 YRGHGSDVIDIAWSPDDSMLASCSL---DNLVIIWDCRTGNPVATLRGHTSFVKGVAWDP 180

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-------------TWSPSGRS 403
            G  +A T+   +   I              + + ++ P              WSP G++
Sbjct: 181 IGKFLA-TQSDDKTCIIWRTDD-------WTQVAKVEEPYQASMGATFSMRLCWSPDGKA 232

Query: 404 L 404
           +
Sbjct: 233 V 233


>gi|123426657|ref|XP_001307086.1| WD repeat protein [Trichomonas vaginalis G3]
 gi|121888695|gb|EAX94156.1| WD repeat protein, putative [Trichomonas vaginalis G3]
          Length = 388

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 56/184 (30%), Gaps = 9/184 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +     +  + D    +   +       L    FS     V   +YD        L D R
Sbjct: 195 TSSFDQTARLWDTRTGDCISILRGHTGELTGADFSLGGNLVITGSYDR----TARLWDVR 250

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           + +    +   +  +L+  FS +G +   +   D+   I+S  +  N             
Sbjct: 251 MVKNIAVLNGHKDQVLSVCFSIDGSKIA-TSSLDKTAAIWS-SVNGNRLAVCEGHTDEVG 308

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S  +SP  ++++  SD        +  +       + +    +     ++  GD I    
Sbjct: 309 SCMFSPQGNKLLTASD---DTTCRLWDAEDGSCTEVLEGHTDAVMMCSFNYAGDRIITAS 365

Query: 366 FSGE 369
               
Sbjct: 366 KDNT 369


>gi|38260619|gb|AAR15437.1| WD-repeat protein [Sisymbrium irio]
          Length = 458

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 63/197 (31%), Gaps = 11/197 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++ + +   Y          +            +I    + +   R+S + +  L + + 
Sbjct: 55  WALDSE---YILCGLYKKPMIQAWSLTQPEWTCKIDEGPAGVSYARWSPDSRHILTTSEF 111

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              + ++S+ L +     +        +S  ++ D       + R+ K+ + ++     +
Sbjct: 112 QLRLTVWSL-LNTACVHVQWPKHGSKGVS--FNQDGKFAAICTRRDCKDYVNLLSCQSWE 168

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQA 394
                        D  WSP    I     S  ++ + +   DG    + +       ++ 
Sbjct: 169 IMGSFAVDTLDLADLEWSPDDSSIV-VWDSPLEYKVLIYSPDGRCLFKYQAYECGLGVKT 227

Query: 395 PTWSPSGRSLIFSRKKD 411
            +WSP G+ L       
Sbjct: 228 VSWSPCGQFLAIGSYDQ 244



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 81/240 (33%), Gaps = 31/240 (12%)

Query: 143 KFFSSPASWRKIA-HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC----VMD 197
           ++ +    +R +   T S  + Q  +        +I ++  ++ S  I   L     +  
Sbjct: 20  RYVAVANDYRLVIRDTFSFQVVQLFS-----CLDKISYIEWALDSEYILCGLYKKPMIQA 74

Query: 198 RDGANIRYLTPSRDQI--LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                  +     +    +   R+SP+ + +   +   E  LR+ +              
Sbjct: 75  WSLTQPEWTCKIDEGPAGVSYARWSPDSRHILTTS---EFQLRLTVWSLLNTACVHVQWP 131

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSP 311
                    F+ +GK A I  ++D    +  +  QS     +  +  ++        +SP
Sbjct: 132 KHGSK-GVSFNQDGKFAAICTRRDCKDYVNLLSCQS---WEIMGSFAVDTLDLADLEWSP 187

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFS 367
           D S IV   D   + ++ +   +G   + + + +       V    WSP G  +A   + 
Sbjct: 188 DDSSIV-VWDSPLEYKVLIYSPDG---RCLFKYQAYECGLGVKTVSWSPCGQFLAIGSYD 243


>gi|325001764|ref|ZP_08122876.1| dipeptidyl peptidase IV [Pseudonocardia sp. P1]
          Length = 750

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 39/276 (14%), Positives = 77/276 (27%), Gaps = 49/276 (17%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM-----DTRIDRA 249
           V+D  G      +   D       +SP+  ++     D   +    L+     D    R 
Sbjct: 174 VLDFFGHRTLMRSFGLDPAPVL-AWSPDSTRILVHRLDQRHVAEQVLVESAPPDGGRPRE 232

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-------LTNTLF 302
            +           P  S                    +D+ + +  R       +T+   
Sbjct: 233 HRYRTAIPGDEAQPTMS-----------------WNVLDVATGSVVRQRDEPCVVTHPSA 275

Query: 303 INISASYS-PDSSQI-VFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVW----- 354
           + +   +S P    + V    R+G+  +L  M     +   +  +   +  DP+      
Sbjct: 276 MQVYRWWSGPAGEWVHVLHHSRDGRSLELRRMDPATGESTTLVSETGRTRLDPMPQYTFG 335

Query: 355 -SP-----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG--RSLIF 406
             P     +G  I +         + +   DG+    L     L           R + F
Sbjct: 336 EPPMVRVLEGGEILWWSQRDGWGHLYLYPADGADPVQLTSGPWLVTRILGVDEERRRVFF 395

Query: 407 SRK---KDGDTGSKLYSIDLNGRNETLINTPAYASD 439
                  D     ++  +DL+G   T +       D
Sbjct: 396 LAGGLVGDDPYVRQICRVDLDGTGVTRLTDDELDHD 431



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 41/133 (30%), Gaps = 11/133 (8%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF------ESDR 322
           G   L   Q+D    +Y          +LT+  ++        +  + VF        D 
Sbjct: 345 GGEILWWSQRDGWGHLYLYPADGADPVQLTSGPWLVTRILGVDEERRRVFFLAGGLVGDD 404

Query: 323 EGKEQLYVMQSNGSDQKRISQDK-EASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDG 380
               Q+  +  +G+   R++ D+ +     P   P G  +     +        V+  DG
Sbjct: 405 PYVRQICRVDLDGTGVTRLTDDELDHDALCP---PGGGYVVDRASTPAVPPRSRVLDADG 461

Query: 381 SQERLLVEDSNLQ 393
                L      +
Sbjct: 462 RVLVELESPDADE 474


>gi|307727414|ref|YP_003910627.1| 40-residue YVTN family beta-propeller repeat-containing protein
           [Burkholderia sp. CCGE1003]
 gi|307587939|gb|ADN61336.1| 40-residue YVTN family beta-propeller repeat protein [Burkholderia
           sp. CCGE1003]
          Length = 402

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 68/193 (35%), Gaps = 21/193 (10%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            + ++D +  R  + + +         FS +GK  L++ + D+ + +Y    ++ A  R 
Sbjct: 195 EIAIVDMKTWRVVRSVTSGHETEGI-EFSRDGKHMLVTNEGDDTVSVY--HARTGAPVR- 250

Query: 298 TNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
           T  L           SPD  + V   +     +L V+ +        + D +   +   +
Sbjct: 251 TVKLAAGGRPRGIRLSPDGKEYVVTLES--LSKLVVIDARTFKVLN-TVDTKLGPYGVAY 307

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTWSPSGRSLIFSRKKD 411
            P G  +       +   +     DG     L +          +++P G  L+ +  + 
Sbjct: 308 GPDGKRLFVAAARDKTVQVF----DGHSYEHLADVPVGQRCWHFSFTPDGAKLLVACGRS 363

Query: 412 GDTGSKLYSIDLN 424
                 +Y +D +
Sbjct: 364 ----DSVYVLDAH 372


>gi|302892115|ref|XP_003044939.1| hypothetical protein NECHADRAFT_70532 [Nectria haematococca mpVI
           77-13-4]
 gi|256725864|gb|EEU39226.1| hypothetical protein NECHADRAFT_70532 [Nectria haematococca mpVI
           77-13-4]
          Length = 905

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 50/157 (31%), Gaps = 12/157 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQIVFE 319
            FS +  R + S  +D  + I+  D  + A           I  S     SPD   I+ +
Sbjct: 594 AFSPD-SRIIASGDRDGIIKIW--DAHTGACLNTIWGDNAQILPSTPIAVSPDGQTIITQ 650

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMK 377
            + +G  ++    +  + +  +       Y+    S     +   +         I V  
Sbjct: 651 VEHDGCCRIRGWSNPETARFTLDALFPDKYYRVAISSDSTKLVGCREEPRYGPLRIEVWD 710

Query: 378 KD-GSQERLLVED--SNLQAPTWSPSGRSLIFSRKKD 411
              G+    L     S+     +SP G  + F   + 
Sbjct: 711 LTKGTCITSLSNPNISDEDVLAFSPDGMVVAFVGMQG 747


>gi|147766289|emb|CAN76773.1| hypothetical protein VITISV_017587 [Vitis vinifera]
          Length = 719

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 86/287 (29%), Gaps = 34/287 (11%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F+LI + S        +++     W+   A  ++   V + G         L  +  +++
Sbjct: 350 FSLIDKKSL-----KVENVMDLS-WSP--ADPILALFVPELGGGNQPARVSLVQIPSKEE 401

Query: 139 IIGKKFFSSPA---SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           +  K  FS       W+     ++  + +    +K  +    LF  +     I    L  
Sbjct: 402 LRQKNLFSVSDCKMYWQSNGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLEL-- 459

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDTRIDRAPKR 252
                        +++  +    + P   + A    D              +   R  K 
Sbjct: 460 ------------ENKNDKIIAFAWEPKGHRFAVIHGDSPRPDVSFYTMRSGSNTGRVSKL 507

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                    A  +S  G+  +++  K     +   ++        T   F+     + P 
Sbjct: 508 TTLKGKQANALFWSPAGRYIILAGLKGFNGQLEFYNVDE-LETMATAEHFMATDIEWDPT 566

Query: 313 SSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              +     S  E +    +   NG    RI +D    +F  +W P+
Sbjct: 567 GRYVATSVTSVHEMENGFNIWSFNGKLLYRILKDH---FFQFLWRPR 610



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 39/121 (32%), Gaps = 6/121 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQL--YVMQS--NGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           ++ P   +         +  +  Y M+S  N     +++  K        WSP G  I  
Sbjct: 470 AWEPKGHRFAVIHGDSPRPDVSFYTMRSGSNTGRVSKLTTLKGKQANALFWSPAGRYIIL 529

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSI 421
               G    +     D  +     E        W P+GR +    +   + + G  ++S 
Sbjct: 530 AGLKGFNGQLEFYNVDELETMATAEHFMATDIEWDPTGRYVATSVTSVHEMENGFNIWSF 589

Query: 422 D 422
           +
Sbjct: 590 N 590


>gi|311745640|ref|ZP_07719425.1| dipeptidyl peptidase IV [Algoriphagus sp. PR1]
 gi|126575076|gb|EAZ79426.1| dipeptidyl peptidase IV [Algoriphagus sp. PR1]
          Length = 744

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 34/239 (14%), Positives = 78/239 (32%), Gaps = 39/239 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISV 276
            +SP+ + +++   D   I   Y+++       + I   +  +   P             
Sbjct: 207 AWSPDAKFISFWQIDASKIGTFYMINNTDSVYSRPIPLQYPKVGEEPA------------ 254

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFI--NISA--SYSPDSSQIVFESDREGKE-QLYVM 331
                  I  VD+ S  T+ L        N      +  +   ++ + +R+  +  ++  
Sbjct: 255 ----GAKIGLVDIASKKTKWLPIPGGEKENYLPGMQWINEDLLLIQQMNRKQNQLTIWTY 310

Query: 332 QSNGSDQKRISQDKEASYFDPV--------WSP-------QGDLIAFTKFSGEKFAIGVM 376
           + +  + K++  + E ++ D          WS         G        +     +  +
Sbjct: 311 KPSNEELKKVYVETEKTWVDLAYPDLSRYGWSDNSLPLVDDGKAFLRMTENDGWRHLYKV 370

Query: 377 KKDGSQERLLVEDSNLQAPTWSP-SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                 + LL         ++   S + + F    +  T   LY+IDL G+ +    TP
Sbjct: 371 DISTGNKTLLT-PGEYDVASFGGLSDKEVFFIASPENATQRYLYAIDLAGKGKLRRVTP 428



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 53/153 (34%), Gaps = 10/153 (6%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRID---RAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           NQ  +      +E++ +VY+   +       P       S    P    +GK  L   + 
Sbjct: 303 NQLTIWTYKPSNEELKKVYVETEKTWVDLAYPDLSRYGWSDNSLPLVD-DGKAFLRMTEN 361

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--ESDREGKEQ-LYVMQSNG 335
           D    +Y VD+ +     LT        AS+   S + VF   S     ++ LY +   G
Sbjct: 362 DGWRHLYKVDISTGNKTLLT--PGEYDVASFGGLSDKEVFFIASPENATQRYLYAIDLAG 419

Query: 336 -SDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
               +R++ +          +P G+       S
Sbjct: 420 KGKLRRVTPEAFEGVNTYDIAPNGEFAVHNHQS 452



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 52/171 (30%), Gaps = 33/171 (19%)

Query: 306 SASYSPDSSQI-VFE-SDREGKEQ----LYVMQSNGSDQKRI-SQDKEASYFDPVWSPQG 358
           S S S D S++ +F  S R  +       YV   +    K++ +Q + +S     +S   
Sbjct: 96  SFSLSEDGSKVLIFTNSSRVWRSNTKGDYYVYDLDTKLLKKLGAQFESSSLMFAKFSSDN 155

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL------------------QAPTWSPS 400
             +A+ +    KF + +      +   L  D                         WSP 
Sbjct: 156 SKVAYVQ----KFNLYLEDFKTGEVTQLTSDGTDKIINGTFDWAYEEEFGKRDGFAWSPD 211

Query: 401 GRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP----AYASDPQWVGFMD 447
            + + F +      G+     + +      I               +G +D
Sbjct: 212 AKFISFWQIDASKIGTFYMINNTDSVYSRPIPLQYPKVGEEPAGAKIGLVD 262


>gi|118575702|ref|YP_875445.1| hypothetical protein CENSYa_0508 [Cenarchaeum symbiosum A]
 gi|118194223|gb|ABK77141.1| hypothetical protein CENSYa_0508 [Cenarchaeum symbiosum A]
          Length = 6862

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 53/167 (31%), Gaps = 11/167 (6%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK--RIGNFRSMILAPRFSSNGKRALIS 275
             FS + + V         I    L       +P   R       I    FSS+G   L+S
Sbjct: 5910 AFSADGRLVFITDSAANSIHEYELYGPYSFDSPPTGRFVLQEGGITGVAFSSDGTAMLVS 5969

Query: 276  VQKDEAMDIYSV----DLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQL 328
                 A+  Y+V    DL +       NT   +       +S D S       + G    
Sbjct: 5970 GIGRGAVYRYTVDQPFDLSTATYRGFFNTTAEDNRPRDVDFSADGSSFFVVGRQSGSVHR 6029

Query: 329  YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            Y + S  +     S +   S      SP G  IAFT      F +G 
Sbjct: 6030 YDLASPLNLTGTHSLNGSFSVGGSEASPNG--IAFTPDGEGLFVVGT 6074



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 46/256 (17%), Positives = 85/256 (33%), Gaps = 39/256 (15%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALI 274
             FSP+ ++V + +    D +  Y +D     A    G F      P    FS +G   LI
Sbjct: 4643 AFSPDGRRV-FISDSGADTVNEYKLDGPYSLAGPPTGTFGLPDGEPTGVAFSDDGTIMLI 4701

Query: 275  SVQKDEAMDIYSVDLQ-------SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            S    +A+  Y +D         S  T  ++           S D    VF     G+++
Sbjct: 4702 SGNVRDAVFGYELDSPFDLSAPVSIGTFSVSAEDDNVRDVELSADGGS-VFI---IGRQR 4757

Query: 328  LYVMQSNGSDQKRISQDKEASYF----------DPVWSPQGDLIAFTKFS---------G 368
              V + + +    I+       F             ++P G+ +     +          
Sbjct: 4758 DSVYRYDLASPFNITDPSFNGSFFIGDSESGPTGLEFTPDGEGLFIVGTAEDTVQEYRLA 4817

Query: 369  EKFAIGVMKKDGSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
              + +       S  R          P   ++SP GR ++F+    G+   +      +G
Sbjct: 4818 GPYELVGADPASSLARSFSVRGQSDNPTAVSFSPDGR-VMFAASDAGNAVLRYGLSSAHG 4876

Query: 426  RNETLINTPAYASDPQ 441
             + T   T +++ D Q
Sbjct: 4877 ID-TAAYTGSFSVDGQ 4891



 Score = 40.0 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 66/214 (30%), Gaps = 30/214 (14%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTR-------IDRAPKRIGNFRSMILAPRFSSNGK 270
              SP+  ++ + T    D +  Y + T               I           FS++G 
Sbjct: 1979 AVSPDGMRM-FITGQLSDAVHQYELGTAFNISTAAYSGDSASIAGQEGSAQGVAFSADGT 2037

Query: 271  RALISVQKDEAMDIYSV----DLQS----NATERLTNTLFINISASYSPDSSQIVFESDR 322
               I+    +++  Y +    DL       +   + N L      ++S D  ++VF SD 
Sbjct: 2038 LMFITGTSSDSLHRYELDDPFDLSGHTYAGSLF-MRNNLGTPSGLAFSADG-RLVFISDM 2095

Query: 323  -EGKEQLYVMQSN---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
              G    Y +      G     +    ++       S  G ++  +   G+      +  
Sbjct: 2096 NSGAIHEYELDGPYGFGGPPVSMYGLSDSEPTGMALSADGTVMVVSGNGGDMVYGFALDP 2155

Query: 379  --DGSQERLL---VEDSNLQAPT---WSPSGRSL 404
              D S    +          +P    +S  G SL
Sbjct: 2156 PFDLSAPVPIESFSTSFQDSSPRDVDFSADGSSL 2189



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 50/301 (16%), Positives = 97/301 (32%), Gaps = 42/301 (13%)

Query: 175  SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
             R+ F+ +S  +            DG       P          FS +   +     D  
Sbjct: 4009 GRVAFMPDSSGAIHQYELDGPYSFDGPPTGTQAPLDKSATGM-AFSADGTHMLITGVDRR 4067

Query: 235  DILRVYL-----MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-- 287
             + R  L     + T    +   I +         FS++G    I  ++ + +  Y +  
Sbjct: 4068 AVYRYTLDQPFDLSTSGFLSSFSISDADGSPQDVVFSTDGGSIFIVGKQRDRVHEYELVS 4127

Query: 288  --DLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVM----QSNGSD 337
              D     T R + ++    SA    +++PD   +      E     Y +      +GS 
Sbjct: 4128 PYDTDPPPTRRGSFSVGDAESAPSGIAFTPDGEGLFVVGTAEDAVHEYRLAGPYNLSGST 4187

Query: 338  QK-------RISQDKEASYFDPVWSPQGDLIAFTKFS---------GEKFAIGVMKKDGS 381
                      ++Q  E +     +S  G ++     +         G  + +G M+  GS
Sbjct: 4188 PSDSLVGSFSVAQQGE-NPTGVSFSGDGRVMYVLSLAAKHVSRYELGSPYDVGSMEYAGS 4246

Query: 382  QERLLVEDSNLQAPTWSPSGRSLIFSRKKD---GDTGSKLYSIDLNGRNETLINTPAYAS 438
              R+  + +N +   +SP G  + F+       G   +  Y +   G     + + A A 
Sbjct: 4247 -FRVAQQGNNPEGLAFSPDGLRMFFTNAPGVVLGSGSAHWYQM---GTYPVDLFSAADAR 4302

Query: 439  D 439
            D
Sbjct: 4303 D 4303



 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 46/335 (13%), Positives = 103/335 (30%), Gaps = 46/335 (13%)

Query: 114  GRVIKEGKDRLRVEFRL--------WDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS 165
            G +  EG  R   +F L         +V  ++  +    FS   +   +  T+S  ++Q 
Sbjct: 5668 GALSGEGGGRFPRQFALPLPAYGGALNVAAQEGDLRDAAFSPDGTRMLVVGTVSAAVHQY 5727

Query: 166  ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
               E   +++     +   +       + +   DG  +  +                   
Sbjct: 5728 NLSE--AYDTATAAYTGDSLGTQGIAPVALALADGGRLMLVLG--------------GTA 5771

Query: 226  VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                 Y   +   +       D    R        +A   S +G +  I+ Q  +A+  Y
Sbjct: 5772 DTVHAYRLAEPYSIVGATPTGDTFRVRPEAPSPRGIA--ISPDGLQMFIAGQISDAVHQY 5829

Query: 286  SVDLQSNATERLTNTLFINISA--------SYSPDSSQIVFESDREGKEQLYVMQSNG-- 335
            ++    +    + + + I++S          +S D + +       G    Y + +    
Sbjct: 5830 TLGTAFDIGTAIYSGVSIDVSGQENSTQGVEFSADGTLMFITGTDSGSLHRYELDNAFNL 5889

Query: 336  ---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA----IGVMKKDGSQE-RLLV 387
               S    +      +  D  +S  G L+  T  +          G    D     R ++
Sbjct: 5890 SGHSYTGSLDAVDSGTPTDLAFSADGRLVFITDSAANSIHEYELYGPYSFDSPPTGRFVL 5949

Query: 388  EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            ++  +    +S  G +++ S    G      Y++D
Sbjct: 5950 QEGGITGVAFSSDGTAMLVSGI--GRGAVYRYTVD 5982



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 14/164 (8%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALI 274
             FS +  ++ + +    D +  Y +D           ++     AP    FS++G   LI
Sbjct: 1446 AFSSDG-RLVFISDSSSDSIYRYELDNPYSFDVSPTDSYGLPDGAPTGAAFSADGTLMLI 1504

Query: 275  SVQKDEAMDIYSV----DLQSNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQ 327
            S    +A+  +++    DL    +    +T   + +      S D    VF   RE    
Sbjct: 1505 SGNGGDAVYGFTLDPPFDLSGIESAGSFSTAGEDTNPRDVDLSADGGS-VFVIGRETNSV 1563

Query: 328  LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                 ++  D    + +          +P G  +AFT      F
Sbjct: 1564 YRYDLASPYDITAPTPNGSFFVGGSEGTPNG--LAFTADGEGLF 1605



 Score = 36.9 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 51/158 (32%), Gaps = 12/158 (7%)

Query: 253  IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF-INISAS--- 308
            +G    +     FS +G+R  IS    + ++ Y +D   +     T T    +   +   
Sbjct: 4632 VGKDTGVPTGMAFSPDGRRVFISDSGADTVNEYKLDGPYSLAGPPTGTFGLPDGEPTGVA 4691

Query: 309  YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG-DLIAFTKFS 367
            +S D + ++      G  +  V          +S       F           +  +   
Sbjct: 4692 FSDDGTIML----ISGNVRDAVFGYELDSPFDLSAPVSIGTFSVSAEDDNVRDVELSADG 4747

Query: 368  GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            G  F IG  + D      L    N+  P++  +G   I
Sbjct: 4748 GSVFIIGRQR-DSVYRYDLASPFNITDPSF--NGSFFI 4782


>gi|323153617|gb|EFZ39865.1| peptidase, S54 (rhomboid) family domain protein [Escherichia coli
           EPECa14]
 gi|323179865|gb|EFZ65422.1| peptidase, S54 (rhomboid) family domain protein [Escherichia coli
           1180]
          Length = 326

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 36/254 (14%), Positives = 84/254 (33%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T       F    S +  K          +  +      ++ D  +++   
Sbjct: 83  ATGEIIQSITTGAHPDSFI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 140

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+        +I  ++  ++  E            +  +
Sbjct: 141 TGTSGKPGAWVMALSPDERTLLVPGA--GRGNIVRINTITHQKEDFPAGDARGTISAMRF 198

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ V     S   +      + Y     SP G  +A   +  +
Sbjct: 199 RPENGEVIFA-DSQGISRISVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 255

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 256 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 304

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 305 SLDPQAIIRHPQYG 318


>gi|310794428|gb|EFQ29889.1| WD domain-containing protein [Glomerella graminicola M1.001]
          Length = 599

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/158 (13%), Positives = 46/158 (29%), Gaps = 15/158 (9%)

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT+         +S D  ++    D    + + +          + +          WSP
Sbjct: 281 LTDLTGEVWQVVFSHDGQRLAACGD---GDTVVIWDLPSFTVSHVLRPHAQGVGGLSWSP 337

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDT 414
              +I             +         L +E  +       W+   ++ I +   D D 
Sbjct: 338 DDSMIVTCSQDK---YARLWDTATGDMILKLERFDEPASGCVWAADSKTFI-TGSLDKDH 393

Query: 415 GSKLYSIDLN-----GRNETLINTPAYASDPQWVGFMD 447
           G + +S         G+   + +    + D  W+  +D
Sbjct: 394 GLRTWSTSGEMLCEWGKKHRVQDLCG-SPDGHWLVAVD 430



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 23/162 (14%), Positives = 51/162 (31%), Gaps = 16/162 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS + Q++A       D   V + D         +      +    +S +    + +  +
Sbjct: 293 FSHDGQRLAAC----GDGDTVVIWDLPSFTVSHVLRPHAQGVGGLSWSPDDSMIV-TCSQ 347

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGS 336
           D+   ++  D  +     +L           ++ DS   +  S D++   + +    + S
Sbjct: 348 DKYARLW--DTATGDMILKLERFDEPASGCVWAADSKTFITGSLDKDHGLRTW----STS 401

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +      K+    D   SP G  +       +   I V   
Sbjct: 402 GEMLCEWGKKHRVQDLCGSPDGHWLVAV---DDLQKIHVYNA 440



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 45/154 (29%), Gaps = 8/154 (5%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSP 311
           + +    +    FS +G+R       D    +   DL S     +       +   S+SP
Sbjct: 281 LTDLTGEVWQVVFSHDGQRLAACGDGD---TVVIWDLPSFTVSHVLRPHAQGVGGLSWSP 337

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D S IV  S     +   +  +   D     +  +      VW+             +  
Sbjct: 338 DDSMIVTCSQ---DKYARLWDTATGDMILKLERFDEPASGCVWAADSKTFITGSLD-KDH 393

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +      G       +   +Q    SP G  L+
Sbjct: 394 GLRTWSTSGEMLCEWGKKHRVQDLCGSPDGHWLV 427


>gi|292611950|ref|XP_001335480.2| PREDICTED: eukaryotic translation initiation factor 3 subunit B
           [Danio rerio]
          Length = 681

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 77/220 (35%), Gaps = 22/220 (10%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD- 279
           P+ +      YD  +   ++  D +     +    +    +  R+S  G       Q+  
Sbjct: 168 PDCRDQYSVIYDSGERTGIFANDVKEPIEVEERARWTETYV--RWSPKGTYLATFHQRGI 225

Query: 280 ---EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES----DREGKEQLYVMQ 332
                     +   S+   +L +         +SP    +V  S     ++  + + +  
Sbjct: 226 ALWGGEKFKQIQRFSHQGVQLID---------FSPCERYVVTFSPLMDTKDDPQAIIIWD 276

Query: 333 SNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                +KR    +  A +    WSP G    F + + +  +I      G  E+  ++ + 
Sbjct: 277 VLTGQKKRGFHCESSAHWPIFKWSPDGKF--FARMTQDMLSIYETPSMGLLEKKSLKING 334

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           ++  +WSP    + F   +D D  +++  +    RNE  +
Sbjct: 335 IKDFSWSPGDNIIAFWVPEDKDIPARVTLMQFPSRNEMRV 374



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 77/248 (31%), Gaps = 21/248 (8%)

Query: 211 DQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
           +     P  ++SP+ +  A  T D   I     M     ++ K  G     I    +S  
Sbjct: 289 ESSAHWPIFKWSPDGKFFARMTQDMLSIYETPSMGLLEKKSLKING-----IKDFSWSPG 343

Query: 269 GKRALISVQKDEAMDIYS--VDLQSNATERLTN-TLFINISASYSPDSSQIVFESDRE-- 323
                  V +D+ +      +   S    R+ N    ++    +  +   +  + DR   
Sbjct: 344 DNIIAFWVPEDKDIPARVTLMQFPSRNEMRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPK 403

Query: 324 GKEQLY----VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMK 377
           G + +     + +           + + S     W P G   A       +       +K
Sbjct: 404 GTQGVVTNFEIFRMREKQVPVDVVEMKDSIIAFAWEPNGSKFAVLHGESPRINSSFYHVK 463

Query: 378 KDGS-QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
            +G      + +     +  WSP G+ L+ +  +       L  +D +      I     
Sbjct: 464 SNGKIDLIKMFDKQQANSIFWSPQGQFLVLAGLRS--MNGALAFVDTSDCTMMNIAEHYM 521

Query: 437 ASDPQWVG 444
           ASD +W  
Sbjct: 522 ASDVEWDP 529


>gi|170728803|ref|YP_001762829.1| peptidase S9 prolyl oligopeptidase [Shewanella woodyi ATCC 51908]
 gi|169814150|gb|ACA88734.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella woodyi ATCC 51908]
          Length = 682

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 73/182 (40%), Gaps = 16/182 (8%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFINISASYSPDSSQIVFESDRE 323
           S +GK      +   A +IY +      +    +T +     S  +S ++++I F  D  
Sbjct: 60  SRDGKWLAFFKEYQGASNIYLMPAGGELSEAFAITTSKDPINSFRWSTEANEIFFLRDTA 119

Query: 324 GKE--QLYVMQSNGSDQKR------ISQDKEASYF---DPVWSPQGDLIAFTKFSGEKFA 372
           G E  Q+Y +  + +  K       ++ +    Y     P  +P   ++   + + ++  
Sbjct: 120 GNENTQVYRLTLDTTQAKPVPSVTALTHNSGVVYNILKQPKENPNTLVLMSNQDNPQQRD 179

Query: 373 IGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
           I  ++ D  +   +            +  GR ++ +   + D  S LY+ +++G+  +LI
Sbjct: 180 IYRLELDSGKITNIFANTYGFSQVEVNKQGRPMLGTSS-NPDNTSDLYA-NIDGKWTSLI 237

Query: 432 NT 433
            T
Sbjct: 238 KT 239



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 3/95 (3%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWS 398
           S   E        S  G  +AF K       I +M   G       +      + +  WS
Sbjct: 47  SFFDEQDISKLSASRDGKWLAFFKEYQGASNIYLMPAGGELSEAFAITTSKDPINSFRWS 106

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
                + F R   G+  +++Y + L+      + +
Sbjct: 107 TEANEIFFLRDTAGNENTQVYRLTLDTTQAKPVPS 141


>gi|170571185|ref|XP_001891632.1| prolyl oligopeptidase family protein [Brugia malayi]
 gi|158603763|gb|EDP39566.1| prolyl oligopeptidase family protein [Brugia malayi]
          Length = 644

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 65/229 (28%), Gaps = 56/229 (24%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
             +H  +D  Y             IL+    V SG    ++ V   DGA +R +    D 
Sbjct: 119 DYSHRFADLCYHK----------GILYAVHEVHSGNEVENMIVQIVDGA-VRPIVTGADF 167

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
             F PR SP  Q + +  ++  ++          D     I + +               
Sbjct: 168 YAF-PRISPXGQWLTWMEWNMPNMP--------WDETTVVISSIK--------------- 203

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               +     + Y +  +               S  ++   + +   SD      +Y + 
Sbjct: 204 ----ENGGIDEFYRISREG----------VNYHSPEWNSAGN-LYLISDHTNWWNVYEVN 248

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                  +     +A    P+W       A   F+  K  I  M   G 
Sbjct: 249 LAEHKLGQNLFPVDAEIGAPLW-----QFAERHFASNKMGIF-MNVSGK 291


>gi|319425811|gb|ADV53885.1| peptidase S9 prolyl oligopeptidase [Shewanella putrefaciens 200]
          Length = 676

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 10/152 (6%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-- 234
           I    +    G  K SL  ++ + A       S    +  P  SP+  ++A+ T++    
Sbjct: 165 ICVREDHRQEGEPKASLVTINLNFAGEGDTFVSGHDFIASPTISPDNTQLAWITWEHPYM 224

Query: 235 --DILRVYLMDTRIDRA----PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             D   ++L D           K +    S +  P FS +G +  +        +IY V 
Sbjct: 225 PWDNSVLWLGDLDRKGQLKNIRKIVTPEHSSVTQPLFSPDG-QLYVVADISNWWNIYRVT 283

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFES 320
                    T      +   +   +    FES
Sbjct: 284 SAGLLVPVFTKNAEFAV-PDWRLGNHNYAFES 314



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 52/147 (35%), Gaps = 18/147 (12%)

Query: 267 SNGKRALISV---QKDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             G R +      +++       V    +        ++   FI  S + SPD++Q+ + 
Sbjct: 159 PKGSRIICVREDHRQEGEPKASLVTINLNFAGEGDTFVSGHDFI-ASPTISPDNTQLAWI 217

Query: 320 SDRE-----GKEQLYVMQSNGSDQ----KRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +            L++   +   Q    ++I   + +S   P++SP G L      S   
Sbjct: 218 TWEHPYMPWDNSVLWLGDLDRKGQLKNIRKIVTPEHSSVTQPLFSPDGQLYVVADISN-W 276

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTW 397
           + I  +   G    +  +++    P W
Sbjct: 277 WNIYRVTSAGLLVPVFTKNAEFAVPDW 303



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 41/148 (27%), Gaps = 17/148 (11%)

Query: 221 PNQQKVAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P   ++     D          +  ++           +    I +P  S +  +     
Sbjct: 159 PKGSRIICVREDHRQEGEPKASLVTINLNFAGEGDTFVSGHDFIASPTISPDNTQLAWIT 218

Query: 277 QKD-----EAMDIYSVDLQ-SNATERL----TNTLFINISASYSPDSSQIVFESDREGKE 326
            +      +   ++  DL      + +    T          +SPD    V  +D     
Sbjct: 219 WEHPYMPWDNSVLWLGDLDRKGQLKNIRKIVTPEHSSVTQPLFSPDGQLYV-VADISNWW 277

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +Y + S G      +  K A +  P W
Sbjct: 278 NIYRVTSAGLLVPVFT--KNAEFAVPDW 303


>gi|127512604|ref|YP_001093801.1| peptidase S9 prolyl oligopeptidase [Shewanella loihica PV-4]
 gi|126637899|gb|ABO23542.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella loihica PV-4]
          Length = 683

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 76/202 (37%), Gaps = 19/202 (9%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG-EKGDFNSRILFVSES-VVSG 187
           L+ VK   Q   + +  +P     +A T +D  +       KG   SRI+ V E    +G
Sbjct: 128 LFAVKSDDQ---RLYRIAPNQAP-VALTPADTRHADCVSYPKG---SRIICVREDHRQAG 180

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL----RVYLMD 243
               S+  ++ +  N      S       PR SP+ +++A+ ++   ++      +++ D
Sbjct: 181 DPTASIVALNLNFENEGEPLVSGSDFYAAPRVSPDNRQLAWISWQQPNMPWDNTELWVAD 240

Query: 244 T----RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
                 I+   +   N +  I  P +S  G    +    +   ++Y +  + +A   L  
Sbjct: 241 LDPKGGINNPRRLFANLKGAITQPLYSPGG-ELYVVADFNNWWNLYRITPEGDAQPVL-E 298

Query: 300 TLFINISASYSPDSSQIVFESD 321
                    +   +    FES+
Sbjct: 299 LAGEFARPDWLLGNHSYAFESE 320



 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 49/149 (32%), Gaps = 19/149 (12%)

Query: 311 PDSSQIVFESD---REGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           P  S+I+   +   + G     +  +  N  ++          Y  P  SP    +A+  
Sbjct: 164 PKGSRIICVREDHRQAGDPTASIVALNLNFENEGEPLVSGSDFYAAPRVSPDNRQLAWIS 223

Query: 366 FSGEKF-----AIGVMKKD--GS--QERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDT 414
           +           + V   D  G     R L  +    +  P +SP G   + +   D + 
Sbjct: 224 WQQPNMPWDNTELWVADLDPKGGINNPRRLFANLKGAITQPLYSPGGELYVVA---DFNN 280

Query: 415 GSKLYSIDLNGRNETLINTPAYASDPQWV 443
              LY I   G  + ++      + P W+
Sbjct: 281 WWNLYRITPEGDAQPVLELAGEFARPDWL 309


>gi|325511204|gb|ADZ22839.1| Putative glycoprotein or S-layer protein [Clostridium
           acetobutylicum EA 2018]
          Length = 368

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 77/220 (35%), Gaps = 34/220 (15%)

Query: 220 SPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           S +  K+AYA    D D  ++YL +   +    R+ N +      + S N     ++   
Sbjct: 98  SNDGSKIAYADALGDNDPWQIYLHNL-TNDQTHRVTNDKFGKSHAKISDNNSVFFLTSSN 156

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           ++ + +  +DL + + + + ++   +             F+S    K    +M ++ S  
Sbjct: 157 EKQVKVGKIDLNTKS-QNIIDSANSDRE--------VDAFDS----KNNKLIMSTDSSSL 203

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           +    ++      P+                   I     +GS  + + E         S
Sbjct: 204 RLQKWNENKGKNVPIL----------------HTILETDLNGSNSKQVAEVQASTVENIS 247

Query: 399 PSG---RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                   +I     +G++G  +Y + L+  N T I T +
Sbjct: 248 YDHDCKNIIICGSDINGNSGLGIYELTLSTGNLTTILTNS 287


>gi|294846039|gb|ADF43197.1| UTP1m [Chlamydomonas reinhardtii]
          Length = 996

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 12/167 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   +     D   +L      T +        +F+  +   RFS +G+   ++V + 
Sbjct: 60  SPDGTLLVSVDKDGRALLINRKRQTLLHHF-----SFKGPVACARFSPDGRYIAVAVGRL 114

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +       +     +L  T     S     ++SPD + +   S         +    G
Sbjct: 115 VQVWCCPTPDKQMNPMQLHRTYGQCHSDVLDIAWSPDGAFLAAASKDITLRVFSLNPIPG 174

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGS 381
            +   +   K+A       SP   ++A     G +   +  +  DGS
Sbjct: 175 YEPPTLCGHKDALLGVFFASP--AMLAKGTADGGEAPCLYSLSVDGS 219



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 64/217 (29%), Gaps = 10/217 (4%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +                +    FSP+   +A    D +    V +          
Sbjct: 404 QLLVWEWRSETYVLKQQGHYHDITTTAFSPDGALIATGADDCK----VKVFQQSSGFCFV 459

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
              +  + + A  F  +G  AL+S   D  +  + + ++      LT         S + 
Sbjct: 460 TFSDHSAPVTAVTFLPSG-HALLSASLDGTVRAWDL-VRYRNFRTLTA-PSPVQFGSLAV 516

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D +  V  +      Q+YV          +    E       +SP   L+A   +     
Sbjct: 517 DPAGEVVCAGTVDTFQIYVWSLKTGRLLDVLAGHEGPVSALAFSPITSLLASGSWDRTVR 576

Query: 372 AIGVM---KKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              V       GS   +L    ++ A    P GR L 
Sbjct: 577 TWDVYGGGGGGGSAGDVLDHRHDVLALAMRPDGRQLA 613



 Score = 36.5 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 10/90 (11%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++  +    S  K +  +          SP G L+      G    I        + +
Sbjct: 30  GNRVGQVNLTESTSKCLPFENLTQIRVLCASPDGTLLVSVDKDGRALLIN------RKRQ 83

Query: 385 LLVEDSNLQAPT----WSPSGRSLIFSRKK 410
            L+   + + P     +SP GR +  +  +
Sbjct: 84  TLLHHFSFKGPVACARFSPDGRYIAVAVGR 113


>gi|254522510|ref|ZP_05134565.1| peptidase, S9A/B/C family, catalytic domain protein
           [Stenotrophomonas sp. SKA14]
 gi|219720101|gb|EED38626.1| peptidase, S9A/B/C family, catalytic domain protein
           [Stenotrophomonas sp. SKA14]
          Length = 838

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 27/223 (12%), Positives = 66/223 (29%), Gaps = 24/223 (10%)

Query: 223 QQKV---AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALI--SV 276
            Q++    ++        +++LM+    +     G   ++ +A   +S + K        
Sbjct: 96  GQRINPRTFSDSRFSFGEKLWLMNVADGKERPISGLPGTLSIASLMWSPDQKWLAFNQVD 155

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQ-IVFESDREGKEQLYVMQS 333
               A +++ VD+ +    RL   L   + +   + PDS   +VF               
Sbjct: 156 AASGANELWLVDVAAGNARRLVAGLNTVMGSGYQWLPDSRGLVVFTRPANLGAAPAADGI 215

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV------MKKDGSQERLLV 387
                 + +           +      +   +    +F          +  DG   R + 
Sbjct: 216 PTGPAVQQTSQGGGVVSIRTY----QDLLKNEADARQFDYYATAQPVEVSLDG-NTRPIG 270

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                   + SP GR ++    +        Y + ++     +
Sbjct: 271 AAGIFMGFSVSPDGRYVL----RQPVQRPYSYVVPVDSFPRRI 309



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 35/97 (36%), Gaps = 10/97 (10%)

Query: 358 GDLIAFTKFSGEKF----AIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLIFSRKK 410
           G  I    FS  +F     + +M     +ER    L    ++ +  WSP  + L F++  
Sbjct: 96  GQRINPRTFSDSRFSFGEKLWLMNVADGKERPISGLPGTLSIASLMWSPDQKWLAFNQVD 155

Query: 411 DGDTGSKLYSIDLNGRNETLINTPAYASDPQ---WVG 444
                ++L+ +D+   N   +             W+ 
Sbjct: 156 AASGANELWLVDVAAGNARRLVAGLNTVMGSGYQWLP 192


>gi|219521168|gb|AAI71830.1| WDR38 protein [Homo sapiens]
          Length = 304

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 60/165 (36%), Gaps = 7/165 (4%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           VY  +TR  +   R+G     +   RFS +G     S   D  + ++ V  ++     L 
Sbjct: 34  VYGWETRSGQLLWRLGGHTGPVKFCRFSPDG-HLFASASCDCTVRLWDV-ARAKCLRVLK 91

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  + S+SPDS Q+         +++ +         R+      S     +SP  
Sbjct: 92  GHQRSVETVSFSPDSRQLA---SGGWDKRVMLWDVQSGQMLRLLVGHRDSIQSSDFSPTV 148

Query: 359 DLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
           + +A   +      + + ++    S + L     N+    +S SG
Sbjct: 149 NCLATGSWDSTVRIWDLRMVTPAVSHQALEGHSGNISCLCYSASG 193



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 73/225 (32%), Gaps = 17/225 (7%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S     ++ + D   A    +     + +    FSP+ +++A   +D     RV L D +
Sbjct: 69  SASCDCTVRLWDVARAKCLRVLKGHQRSVETVSFSPDSRQLASGGWDK----RVMLWDVQ 124

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER--LTNTLFI 303
             +  + +   R  I +  FS        +   D  + I+ + + + A     L      
Sbjct: 125 SGQMLRLLVGHRDSIQSSDFSPTVNCLA-TGSWDSTVRIWDLRMVTPAVSHQALEGHSGN 183

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
                YS         +     + +++ +   S      +          +SP    +A 
Sbjct: 184 ISCLCYSASG----LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSPDELWLA- 238

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGRSLI 405
              +G    + V   +  +    ++   L       ++P G+ L+
Sbjct: 239 --SAGYSRMVKVWDCNTGKCLETLKQGVLDVAHTCAFTPDGKILV 281


>gi|213405531|ref|XP_002173537.1| Set1 complex component swd3 [Schizosaccharomyces japonicus yFS275]
 gi|212001584|gb|EEB07244.1| Set1 complex component swd3 [Schizosaccharomyces japonicus yFS275]
          Length = 391

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 56/174 (32%), Gaps = 12/174 (6%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S N +    +   D  + I+      +    L          ++S DS  +V  SD    
Sbjct: 26  SPNKRWLA-TASSDGVIKIW-YTRSFSLECTLYGHTAGVSQVAWSCDSKLLVSASD---D 80

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           + + V        +R+ +          ++  G+LI    +        V   +GS  R 
Sbjct: 81  KTIRVWNVENGKCERVLRGHTNYVLCVDFNHDGNLIVSGSWDETVKIWNVQ--EGSCLRT 138

Query: 386 L-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
           L      + A ++S     L  +     D  ++++ +   G+    +  P    
Sbjct: 139 LPAHSEPVTAVSFSHDSTLLATASY---DGMARIWDVP-TGQCLKTLVEPVNVP 188


>gi|254392073|ref|ZP_05007263.1| peptidase [Streptomyces clavuligerus ATCC 27064]
 gi|197705750|gb|EDY51562.1| peptidase [Streptomyces clavuligerus ATCC 27064]
          Length = 248

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 26/150 (17%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL------- 360
           + SPD  +++F     G + +  +      ++R+  D  A        P+ +        
Sbjct: 93  TVSPDGERVLFLRSTRGDDPVSRLWLYSGGRERMLADPTALDGAEGEVPEAERALRERTR 152

Query: 361 ------IAFTKFSGEKFA-------IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                 +A+   +  + A       + V+  DG+  R +     +  P  SP GR + + 
Sbjct: 153 ETASGVVAYATDAEVRLAAFALGGVVWVVTTDGAAPRRITTAGPVTDPRPSPDGRWVAYV 212

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
                        + + G  + L+  P  A
Sbjct: 213 SGGSFR------VVGVRGGGDRLLAAPDGA 236



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/205 (14%), Positives = 63/205 (30%), Gaps = 46/205 (22%)

Query: 186 SGIIKNSLCVMDRDGAN--------IRYLTPSRDQILFEPR---FSPNQQKVAYATYDDE 234
            G  +  +  +  DGA          R L  +    L  PR    SP+ ++V +      
Sbjct: 50  GGCARCPVPPISADGATADLQCPGFPRQLARTHRFSLGVPRRFTVSPDGERVLFLRSTRG 109

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILA----------------------PRFSSNG--K 270
           D     L         + + +  ++  A                        ++++   +
Sbjct: 110 DDPVSRLW-LYSGGRERMLADPTALDGAEGEVPEAERALRERTRETASGVVAYATDAEVR 168

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
            A  ++       ++ V     A  R+T T         SPD   + + S   G  ++  
Sbjct: 169 LAAFAL----GGVVWVVTTDGAAPRRIT-TAGPVTDPRPSPDGRWVAYVS--GGSFRVVG 221

Query: 331 MQSNGSDQKRISQDKEASYFDPVWS 355
           ++  G    R+    + +  D  +S
Sbjct: 222 VRGGGD---RLLAAPDGALCDARFS 243


>gi|170592499|ref|XP_001901002.1| WD40 associated region in TFIID subunit family protein [Brugia
           malayi]
 gi|158591069|gb|EDP29682.1| WD40 associated region in TFIID subunit family protein [Brugia
           malayi]
          Length = 616

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 58/169 (34%), Gaps = 14/169 (8%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                + +  FS + KR L+S  +D  + ++S+ ++SN                +SP S 
Sbjct: 362 GHNGPVYSLSFSPD-KRLLLSSSRDGTVRLWSLAVRSNVVVY--KHAAPIWEVQFSPRSY 418

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                   +G   L+          RI  D  +      + P  +   F   S +++ + 
Sbjct: 419 YFA-TGSADGAAMLWTTDR--LQPLRIFSDALSDVTCIDFHPNCNY--FAGGSDDRY-VR 472

Query: 375 VMK-KDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           V     G+  R       +++    SP GR L        +    L+ +
Sbjct: 473 VWDVLSGTCVRCFAGHKGSIRGLKISPCGRYLA---SLGSEGSLVLWDM 518



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 77/221 (34%), Gaps = 19/221 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    +  ++   FSP+++ +  ++ D    +R++ +  R +     +    + I   +F
Sbjct: 359 IFQGHNGPVYSLSFSPDKRLLLSSSRD--GTVRLWSLAVRSNV---VVYKHAAPIWEVQF 413

Query: 266 SSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
           S   +    +    D A  +++ D       R+ +    +++   + P+ +     SD  
Sbjct: 414 SP--RSYYFATGSADGAAMLWTTDRL--QPLRIFSDALSDVTCIDFHPNCNYFAGGSD-- 467

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + V         R     + S      SP G  +A +  S     +  M       
Sbjct: 468 -DRYVRVWDVLSGTCVRCFAGHKGSIRGLKISPCGRYLA-SLGSEGSLVLWDMALQKMVC 525

Query: 384 RLLVEDSNLQAPT-WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              V     Q P  +S  G +L  +R    D+    YS+D 
Sbjct: 526 MQDVPALPYQVPVEFSRDGAALTVAR---ADSALSFYSVDT 563


>gi|156542771|ref|XP_001602703.1| PREDICTED: similar to wd-repeat protein isoform 2 [Nasonia
           vitripennis]
          Length = 500

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 57/177 (32%), Gaps = 17/177 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +   ++ P    +A  + D      + +   + D     +      I   ++S
Sbjct: 330 FQGHTNEVNAIKWDPQGNLLASCSDDM----TLKIWSMKQDTCLHDLQAHSKEIYTIKWS 385

Query: 267 SNG--------KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             G           L+S   D  + ++ +D +      LT       S ++SPD   +  
Sbjct: 386 PTGPGTLNPNMNLTLVSASFDSDVRLWDID-RGACIYTLTQHTEPVYSVAFSPDGKFLAS 444

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            S     + +++  +        S       F+  W+ +GD +  +   G  F + +
Sbjct: 445 GSF---DKYVHIWSTQSGQLVH-SYKGTGGIFEVCWNSRGDKVGASASDGSVFVLDL 497


>gi|15004761|ref|NP_149221.1| putative glycoportein or S-layer protein [Clostridium
           acetobutylicum ATCC 824]
 gi|14994373|gb|AAK76803.1|AE001438_56 Putative glycoportein or S-layer protein [Clostridium
           acetobutylicum ATCC 824]
          Length = 373

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 77/220 (35%), Gaps = 34/220 (15%)

Query: 220 SPNQQKVAYA-TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           S +  K+AYA    D D  ++YL +   +    R+ N +      + S N     ++   
Sbjct: 103 SNDGSKIAYADALGDNDPWQIYLHNL-TNDQTHRVTNDKFGKSHAKISDNNSVFFLTSSN 161

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           ++ + +  +DL + + + + ++   +             F+S    K    +M ++ S  
Sbjct: 162 EKQVKVGKIDLNTKS-QNIIDSANSDRE--------VDAFDS----KNNKLIMSTDSSSL 208

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           +    ++      P+                   I     +GS  + + E         S
Sbjct: 209 RLQKWNENKGKNVPIL----------------HTILETDLNGSNSKQVAEVQASTVENIS 252

Query: 399 PSG---RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                   +I     +G++G  +Y + L+  N T I T +
Sbjct: 253 YDHDCKNIIICGSDINGNSGLGIYELTLSTGNLTTILTNS 292


>gi|120599495|ref|YP_964069.1| peptidase S9 prolyl oligopeptidase [Shewanella sp. W3-18-1]
 gi|120559588|gb|ABM25515.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella sp. W3-18-1]
          Length = 676

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 10/152 (6%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-- 234
           I    +    G  K SL  ++ + A       S    +  P  SP+  ++A+ T++    
Sbjct: 165 ICVREDHRQEGEPKASLVTINLNFAGEGDTFVSGHDFIASPTISPDNTQLAWITWEHPYM 224

Query: 235 --DILRVYLMDTRIDRA----PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             D   ++L D           K +    S +  P FS +G +  +        +IY V 
Sbjct: 225 PWDNSVLWLGDLDRKGQLKNIRKIVTPEHSSVTQPLFSPDG-QLYVVADISNWWNIYRVT 283

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFES 320
                    T      +   +   +    FES
Sbjct: 284 SAGLLVPVFTKNAEFAV-PDWRLGNHNYAFES 314



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 52/147 (35%), Gaps = 18/147 (12%)

Query: 267 SNGKRALISV---QKDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             G R +      +++       V    +        ++   FI  S + SPD++Q+ + 
Sbjct: 159 PKGSRIICVREDHRQEGEPKASLVTINLNFAGEGDTFVSGHDFI-ASPTISPDNTQLAWI 217

Query: 320 SDRE-----GKEQLYVMQSNGSDQ----KRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +            L++   +   Q    ++I   + +S   P++SP G L      S   
Sbjct: 218 TWEHPYMPWDNSVLWLGDLDRKGQLKNIRKIVTPEHSSVTQPLFSPDGQLYVVADISN-W 276

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTW 397
           + I  +   G    +  +++    P W
Sbjct: 277 WNIYRVTSAGLLVPVFTKNAEFAVPDW 303



 Score = 40.4 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 41/148 (27%), Gaps = 17/148 (11%)

Query: 221 PNQQKVAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P   ++     D          +  ++           +    I +P  S +  +     
Sbjct: 159 PKGSRIICVREDHRQEGEPKASLVTINLNFAGEGDTFVSGHDFIASPTISPDNTQLAWIT 218

Query: 277 QKD-----EAMDIYSVDLQ-SNATERL----TNTLFINISASYSPDSSQIVFESDREGKE 326
            +      +   ++  DL      + +    T          +SPD    V  +D     
Sbjct: 219 WEHPYMPWDNSVLWLGDLDRKGQLKNIRKIVTPEHSSVTQPLFSPDGQLYV-VADISNWW 277

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +Y + S G      +  K A +  P W
Sbjct: 278 NIYRVTSAGLLVPVFT--KNAEFAVPDW 303


>gi|239983366|ref|ZP_04705890.1| acyl-peptide hydrolase [Streptomyces albus J1074]
          Length = 659

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 67/210 (31%), Gaps = 23/210 (10%)

Query: 254 GNFRSMILAPRFSSNGKRALISV-------QKDEAMDIYSVDLQS--NATERLTNTLFIN 304
            +    +  PR S +G+RA+               + I  V  +        L      +
Sbjct: 182 TDRHRFVTGPRLSPDGQRAVWIAWDHPRMPWDGTELKIAEVTAEGPFTGVRTLIGGPEES 241

Query: 305 I-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDPVW-SP- 356
           +  A ++ D S I    DR G   L+ +     + K +                 W +P 
Sbjct: 242 VCQAEWASDGSLIAAT-DRSGWWNLHRVDPATGEAKPLCPREEEFGGPLWRIGSRWFAPM 300

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-TG 415
           +  LIA     G    +G++  D  +           A      G  +  +    G  + 
Sbjct: 301 ENGLIAVVHGRGST-RLGILDPDAGEICDAAGPWTTWAACLDVRGSRV--TGVAAGPLSA 357

Query: 416 SKLYSID-LNGRNETLINTPAYASDPQWVG 444
           +++  +D + GR   +      A DP ++ 
Sbjct: 358 AEIVELDTVTGRARVVAARHTDAVDPAYLP 387



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/103 (15%), Positives = 36/103 (34%), Gaps = 9/103 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV--------YLMDTRIDRAPKRIG 254
           +R L   R + +  PR SP+ Q+  +  +D   +              +         IG
Sbjct: 177 VRELDTDRHRFVTGPRLSPDGQRAVWIAWDHPRMPWDGTELKIAEVTAEGPFTGVRTLIG 236

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
                +    ++S+G     +  +    +++ VD  +   + L
Sbjct: 237 GPEESVCQAEWASDGSLIA-ATDRSGWWNLHRVDPATGEAKPL 278



 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 42/276 (15%), Positives = 78/276 (28%), Gaps = 40/276 (14%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           DG          D     PR +   ++       D     V            R+  +  
Sbjct: 23  DGRPDSVAHVGDDLWWTAPRPAEGGRRTLVRRRPDGTEESVL---PAPWNVRSRVVEYGG 79

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV- 317
              A     +G   +     D+ +  Y  D        LT    +     ++    Q+  
Sbjct: 80  EPWAGVPGPDGPLVVFVHFADQRLYAYEPDRPEAGPRPLTPLSGVGGGLRWADPVVQVAT 139

Query: 318 ---------FESDREGKEQLYVMQS----NGSDQ------KRISQDKEASYFDPVWSPQG 358
                    F    EG   +  + +    +GS        + +  D+      P  SP G
Sbjct: 140 GEVWCVLEEFTG--EGPTDVRRVPAAVPLDGSAAENRDAVRELDTDRHRFVTGPRLSPDG 197

Query: 359 D---LIAFTK----FSGEKFAIGVMKKDG--SQERLLVEDS--NLQAPTWSPSGRSLIFS 407
                IA+      + G +  I  +  +G  +  R L+     ++    W+  G  +  +
Sbjct: 198 QRAVWIAWDHPRMPWDGTELKIAEVTAEGPFTGVRTLIGGPEESVCQAEWASDGSLIA-A 256

Query: 408 RKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQW 442
             + G     L+ +D   G  + L         P W
Sbjct: 257 TDRSG--WWNLHRVDPATGEAKPLCPREEEFGGPLW 290


>gi|189501497|ref|YP_001957214.1| hypothetical protein Aasi_0028 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189496938|gb|ACE05485.1| hypothetical protein Aasi_0028 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 914

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 52/324 (16%), Positives = 104/324 (32%), Gaps = 45/324 (13%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR-F 219
           DI   +      +     F   +    +   SL  + +D         S+     +   F
Sbjct: 230 DIISKLMQRDNIWEIINPFTLHNRCRKLTSRSLTQIYQDVNTELKELWSKQLEDLKITSF 289

Query: 220 SPNQQKVA--YATYDDEDILRVYLMDTRIDRAPKRIGNF--------RSMILAPRFSSNG 269
            P   + +  Y  Y     +   ++  +       I +F         + I  P      
Sbjct: 290 HPIHTRNSEEYTDYKYPQPISSGIIAIKSGIGT--ITHFTYINETGKENHIFTPG--PID 345

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---------------ASYSPDSS 314
                S  KD+ + I  +       +R T     NI+               A+ SP+++
Sbjct: 346 SDIRFSAAKDKIVWIEHMPALRWEHKRYTAIQSYNITTKRYKTIAYPSRYSTAALSPNAT 405

Query: 315 Q-IVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           + I  E+D     +L V+ +        +       Y  P+WS  G  I   K    K  
Sbjct: 406 KLIAVETDEAYNHKLMVLDAETGAILCSLPNPANHYYLTPIWSSDGKYIVTVKHVQNKAG 465

Query: 373 IGVMKKDGSQER--LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
           I ++     + +  L   +  +  P     G  + +S    G     +Y++ +N +    
Sbjct: 466 ISLIDPQTGKSQDILPYTEELIGCPILH--GSYIYYSSAYSG--IDNIYAVHINTKQRFQ 521

Query: 431 INT-------PAYASDPQWVGFMD 447
           + +       PA ++D +W+ + D
Sbjct: 522 VTSSKYGAYNPAVSTDGKWLLYND 545


>gi|146292507|ref|YP_001182931.1| peptidase S9 prolyl oligopeptidase [Shewanella putrefaciens CN-32]
 gi|145564197|gb|ABP75132.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Shewanella putrefaciens CN-32]
          Length = 676

 Score = 45.4 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 10/152 (6%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-- 234
           I    +    G  K SL  ++ + A       S    +  P  SP+  ++A+ T++    
Sbjct: 165 ICVREDHRQEGEPKASLVTINLNFAGEGDTFVSGHDFIASPTISPDNTQLAWITWEHPYM 224

Query: 235 --DILRVYLMDTRIDRA----PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             D   ++L D           K +    S +  P FS +G +  +        +IY V 
Sbjct: 225 PWDNSVLWLGDLDRKGQLKNIRKIVTPEHSSVTQPLFSPDG-QLYVVADISNWWNIYRVT 283

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFES 320
                    T      +   +   +    FES
Sbjct: 284 SAGLLVPVFTKNAEFAV-PDWRLGNHNYAFES 314



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 52/147 (35%), Gaps = 18/147 (12%)

Query: 267 SNGKRALISV---QKDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             G R +      +++       V    +        ++   FI  S + SPD++Q+ + 
Sbjct: 159 PKGSRIICVREDHRQEGEPKASLVTINLNFAGEGDTFVSGHDFI-ASPTISPDNTQLAWI 217

Query: 320 SDRE-----GKEQLYVMQSNGSDQ----KRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +            L++   +   Q    ++I   + +S   P++SP G L      S   
Sbjct: 218 TWEHPYMPWDNSVLWLGDLDRKGQLKNIRKIVTPEHSSVTQPLFSPDGQLYVVADISN-W 276

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTW 397
           + I  +   G    +  +++    P W
Sbjct: 277 WNIYRVTSAGLLVPVFTKNAEFAVPDW 303



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 20/148 (13%), Positives = 41/148 (27%), Gaps = 17/148 (11%)

Query: 221 PNQQKVAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P   ++     D          +  ++           +    I +P  S +  +     
Sbjct: 159 PKGSRIICVREDHRQEGEPKASLVTINLNFAGEGDTFVSGHDFIASPTISPDNTQLAWIT 218

Query: 277 QKD-----EAMDIYSVDLQ-SNATERL----TNTLFINISASYSPDSSQIVFESDREGKE 326
            +      +   ++  DL      + +    T          +SPD    V  +D     
Sbjct: 219 WEHPYMPWDNSVLWLGDLDRKGQLKNIRKIVTPEHSSVTQPLFSPDGQLYV-VADISNWW 277

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVW 354
            +Y + S G      +  K A +  P W
Sbjct: 278 NIYRVTSAGLLVPVFT--KNAEFAVPDW 303


>gi|329954323|ref|ZP_08295416.1| hypothetical protein HMPREF9445_00244 [Bacteroides clarus YIT
           12056]
 gi|328527851|gb|EGF54841.1| hypothetical protein HMPREF9445_00244 [Bacteroides clarus YIT
           12056]
          Length = 1330

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 74/167 (44%), Gaps = 22/167 (13%)

Query: 288 DLQSNATERLTNTLFI-NISASYSPDSSQIVFE-SDREGKEQLYVMQSNGSDQKRI--SQ 343
           D+++    +  N   + ++   +  D+ +++F   D + + Q++ ++ +G+  K++  + 
Sbjct: 412 DIKTRTIFKPNNGSSVPDLKLHW--DAERLMFSMVDTDKRWQVFEVKLDGTGLKKLIETP 469

Query: 344 DKEASYFDPVWSPQGDLIAFTKFS-------GEKFAIGVM----KKDGSQERLLVEDSNL 392
           +K+  +FD  + P G +IA +               +G M     KDGS  RL  +    
Sbjct: 470 EKDLEFFDATYLPSGKIIAVSNIGYNGVPCVNGNDEVGNMCLYDPKDGSLRRLTFDQDAN 529

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSK----LYSIDLNGRNETLINTPA 435
            APT   +GR ++++R +  D        +  ++ +G  +  +    
Sbjct: 530 WAPTVMNNGR-IMYTRWEYTDLTHYFSRFVMHMNPDGTEQKSLYGSG 575



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/149 (14%), Positives = 49/149 (32%), Gaps = 19/149 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQ-- 277
           + +++ ++  D +   +V+ +        K I      +      +  +GK   +S    
Sbjct: 435 DAERLMFSMVDTDKRWQVFEVKLDGTGLKKLIETPEKDLEFFDATYLPSGKIIAVSNIGY 494

Query: 278 --------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
                    DE  ++   D +  +  RLT     N + +   +   +    +       +
Sbjct: 495 NGVPCVNGNDEVGNMCLYDPKDGSLRRLTFDQDANWAPTVMNNGRIMYTRWEYTDLTHYF 554

Query: 330 -----VMQSNGSDQKRISQDKEASYFDPV 353
                 M  +G++QK +      SYF   
Sbjct: 555 SRFVMHMNPDGTEQKSLY--GSGSYFPNS 581


>gi|326664697|ref|XP_003197866.1| PREDICTED: fizzy-related protein homolog [Danio rerio]
          Length = 485

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/253 (11%), Positives = 79/253 (31%), Gaps = 19/253 (7%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            + D      +     +N R   V+     G  K  + + D  G             +  
Sbjct: 214 RLCDLSVDGDSVTSVCWNERGSLVAV----GTHKGFVQIWDAAGGRKLTSLEGHSARVGA 269

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +  N +++   +    D + +           +R+   R  +   ++S + +      
Sbjct: 270 LAW--NGEQL---SSGSRDRVILQRDVRTPPPVERRLQGHRQEVCGLKWSPDHQHLA--- 321

Query: 277 QKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
                 D   +   S++    ++ ++ L    + ++SP    ++  S     ++     +
Sbjct: 322 --SGGNDNKLLVWNSSSLLPVQQYSDHLAAVKAIAWSPHQHGLL-ASGGGTADRCLRFWN 378

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTK-FSGEKFAIGVMKKDGSQERLLVEDSNL 392
             + Q   S D  +   +  WS   + +  T  +S  +  +          +L      +
Sbjct: 379 TLTGQALQSTDTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLTQVAKLTGHSYRV 438

Query: 393 QAPTWSPSGRSLI 405
                SP G +++
Sbjct: 439 LYLAVSPDGEAIV 451


>gi|307352355|ref|YP_003893406.1| hypothetical protein Mpet_0190 [Methanoplanus petrolearius DSM
           11571]
 gi|307155588|gb|ADN34968.1| hypothetical protein Mpet_0190 [Methanoplanus petrolearius DSM
           11571]
          Length = 458

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 66/179 (36%), Gaps = 17/179 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPDSSQIVFESDREG 324
           +G R +   +  +   +   D+ +         +  +      + S    ++V+ S  +G
Sbjct: 126 DGDRVVWEEKTADQSFLRMYDISTGDYGDAVKGVGKDTDCLLPAIS--GDRLVYISMEQG 183

Query: 325 KEQLYVM--QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
              +Y+M       ++  +++   ++Y  P     G+LI + +   E +++ +   +   
Sbjct: 184 SSAIYLMLYNMTTGEKTNVARL-PSTYQPPAI--DGNLIVWAESYDEYYSVYMYDIEKQM 240

Query: 383 ERLLVE-DSNLQAPTWSPSGRSLIFSRK----KDGDTGSKLYSIDLNGRNETLINTPAY 436
             ++         P  S  G  +++       +D + G  +Y  D    N ++I+    
Sbjct: 241 TSVISPMTGYQMYPDIS--GDCVVWVYYGQKGEDLENGGSIYLYDSKAGNASVISQEGE 297


>gi|226944821|ref|YP_002799894.1| 3-carboxymuconate cyclase [Azotobacter vinelandii DJ]
 gi|226719748|gb|ACO78919.1| 3-carboxymuconate cyclase [Azotobacter vinelandii DJ]
          Length = 363

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 52/358 (14%), Positives = 100/358 (27%), Gaps = 34/358 (9%)

Query: 113 TGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGD 172
            G       + + V    +D +               +   +A +  D  Y     E G 
Sbjct: 3   IGSYTAGPSEGIYVHN--FDSRSGTLSREPLQVVKTENPSWLAFS-PDRKYLFAVNENGP 59

Query: 173 FNSRILFVSESVVSGIIKNSLCVMD---RDGANIRYLTPSRDQI-LFEPRFS----PNQQ 224
               I+    S      K SL  ++     G+   +L+ S D   LF   +S    P   
Sbjct: 60  GQRDIVGRVTSYRVDTAKGSLEKINEVKSLGSEPAHLSVSHDGTHLFVSNYSVAADPGGT 119

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            V      D  +  V  + T               + +   S +G+         + + +
Sbjct: 120 LVVIPVDADGRLQPVSQVKTHRASQAHPERQQSPHVHSAVESPDGRYVFAQDLGADRIYV 179

Query: 285 YSVDLQSNATERLTNT---LFINISA-------SYSPDSSQIVFESDREGKEQLYVMQSN 334
           Y  D  ++    L+      F+ +          + PD  Q     + +G   ++     
Sbjct: 180 YRYDPAAHPEHPLSANEAQPFVELPPGSGPRHLVFGPDGKQAYLTLEMQGSVAVFDYADG 239

Query: 335 GSDQKR------ISQDKEASYFDPVWSPQGDLIAFTKF--SGEKFAIGVMKKDGSQERLL 386
               K+           ++       SP G  +  T    + E   + +   DG    + 
Sbjct: 240 KLTPKQNVALAAEGFQGQSKAAALHVSPDGRFLYATNRGTANELVVLRIDPDDGRLSVVS 299

Query: 387 VEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
                 + P   T+ PSGR ++ +          +   D +      I        P 
Sbjct: 300 RHSVQGEEPREFTFDPSGRFILVA--NQNSNAIVVMERDPDTGKAGRITQSLPFPSPS 355



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 35/101 (34%), Gaps = 9/101 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALISV 276
           SP+ + +        + L V  +D    R    +         PR   F  +G+  L++ 
Sbjct: 266 SPDGRFLYATNRGTANELVVLRIDPDDGRLS-VVSRHSVQGEEPREFTFDPSGRFILVAN 324

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           Q   A+ +   D  +    R+T +L        SP   +  
Sbjct: 325 QNSNAIVVMERDPDTGKAGRITQSL-----PFPSPSDLKFA 360


>gi|58583999|ref|YP_203015.1| dipeptidyl anminopeptidase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84625777|ref|YP_453149.1| dipeptidyl aminopeptidase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188574670|ref|YP_001911599.1| dipeptidyl anminopeptidase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|58428593|gb|AAW77630.1| dipeptidyl anminopeptidase [Xanthomonas oryzae pv. oryzae
           KACC10331]
 gi|84369717|dbj|BAE70875.1| dipeptidyl aminopeptidase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188519122|gb|ACD57067.1| dipeptidyl anminopeptidase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 694

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 10/137 (7%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKF 366
           S SPD   + + +  EG   ++V   +  DQ R I++D      +  W+ Q + + + + 
Sbjct: 60  SISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPNTLLYLRD 119

Query: 367 SGE--KFAIGVMKKDGSQERLLVEDSNLQAPTW-----SPSGRSLIFSRKKDGDTGSKLY 419
           +G    F +  +       + L   +   A  +      P   S++            LY
Sbjct: 120 NGGDEDFHLFSVNLTDGSSKDLTPFNKTNAEVYRVSAQHP--ESIMVGMNDRDAKWHDLY 177

Query: 420 SIDLNGRNETLINTPAY 436
            +DL     TL+     
Sbjct: 178 RVDLASGTRTLVQKNTE 194



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 59/169 (34%), Gaps = 13/169 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLF---INISASYSPDSSQIVFE 319
             S +GK        +  ++++   + + +    +T        N   +Y P+   +++ 
Sbjct: 60  SISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPN--TLLYL 117

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIG 374
            D  G E   L+ +       K ++   + +      S   P+  ++       +   + 
Sbjct: 118 RDNGGDEDFHLFSVNLTDGSSKDLTPFNKTNAEVYRVSAQHPESIMVGMNDRDAKWHDLY 177

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSID 422
            +    S  R LV+ +  +   +   G   L ++ +   D G +L   D
Sbjct: 178 RVDLA-SGTRTLVQKNTERLDAYLLDGDYQLRYATRATDDAGRELLVPD 225



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 8/94 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDS----NLQAPTWSP 399
                 +   SP G  +++         + V   D   Q R + +D+         T+ P
Sbjct: 52  GNPERANVSISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQP 111

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
           +  +L++ R   GD    L+S++L +G ++ L  
Sbjct: 112 N--TLLYLRDNGGDEDFHLFSVNLTDGSSKDLTP 143


>gi|17554220|ref|NP_499755.1| LIS-1 (human lissencephaly gene) related family member (lis-1)
           [Caenorhabditis elegans]
 gi|60392621|sp|Q9NDC9|LIS1_CAEEL RecName: Full=Lissencephaly-1 homolog; AltName: Full=Pronuclear
           migration abnormal protein 1
 gi|9081899|gb|AAF82632.1|AF164430_1 LIS-1 [Caenorhabditis elegans]
 gi|18369718|emb|CAB03282.3| C. elegans protein T03F6.5, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 404

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/230 (13%), Positives = 65/230 (28%), Gaps = 26/230 (11%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-TRIDRAP 250
           ++ V D +   +          + +       +++   + D    L + L D  +     
Sbjct: 129 TIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSD----LSIKLWDFGQTYDCL 184

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASY 309
           K +      + +  F   G   L S  +D  +  +  D+ +                   
Sbjct: 185 KSLKGHEHTVSSVTFLPTGDFVL-SASRDHTIKQW--DISTGYCVYTFRGHNDWVRMIRI 241

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ------------ 357
           S D +     S     + + V        K + +D E +     W+P             
Sbjct: 242 SNDGTLFASASL---DQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPE 298

Query: 358 --GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
                I F+           +        LL  ++ ++   + P G+ LI
Sbjct: 299 GNSTHILFSGSRDRSIKAWNINTGDVLFTLLAHENWVRGLAFHPKGKYLI 348


>gi|307107898|gb|EFN56139.1| hypothetical protein CHLNCDRAFT_48736 [Chlorella variabilis]
          Length = 478

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 51/151 (33%), Gaps = 10/151 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ Q++A              + +R       +   R MI++ R++  G   L+S   
Sbjct: 199 WSPDGQQLA-----TGATDNAVRLFSREGVLKSTLQGHRGMIMSVRWNKKGD-LLLSGSL 252

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D  + ++      +  ++  +     + A +    +  +F S  +         S+    
Sbjct: 253 DGTLVVWDA-KAGSQQKQYGHHTGSVVDADW---RNNTMFASCSQDGSIAVCKLSDSKPL 308

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +       A      W P G L+A     G 
Sbjct: 309 RHWQGAHSADINGVRWEPSGKLLASCSDDGS 339



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/197 (14%), Positives = 66/197 (33%), Gaps = 11/197 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG +  +L V D    + +         + +  +  N    A  + D   I    L D++
Sbjct: 249 SGSLDGTLVVWDAKAGSQQKQYGHHTGSVVDADWRNN-TMFASCSQD-GSIAVCKLSDSK 306

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
             R  +  G   + I   R+  +GK    S   D ++ I+    +      L   +    
Sbjct: 307 PLRHWQ--GAHSADINGVRWEPSGKLLA-SCSDDGSVKIWQATAE-KPVHSLAGHVGPVT 362

Query: 306 SASY--SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +  +  S      +     +G  +++   +       +  + + +     WSP    +A 
Sbjct: 363 AVRWGQSSSGKCQLASCGEDGSVRVW--DAEAGACVHVFNEHDTAVSIIAWSPDATYLA- 419

Query: 364 TKFSGEKFAIGVMKKDG 380
           +  +  +  +  ++  G
Sbjct: 420 SGDASGRLLVWSLRTGG 436


>gi|258578015|ref|XP_002543189.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237903455|gb|EEP77856.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 987

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 59/165 (35%), Gaps = 20/165 (12%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H  +  I  + T   G    R+  V              ++D +               F
Sbjct: 752 HKFARAINCTDTSPDG----RLRVVIGDAPDA------WIIDSETGKPVQTLIGHRDYGF 801

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG---KRA 272
              +SP+   +A +  D      V + D R+ R  + I +  +   + RFS  G   +  
Sbjct: 802 ACAWSPDMLHIATSNQDK----TVNIWDARMWRILQSIDSDIAGYRSLRFSPVGGGPRTL 857

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           L+    + A  I  V+ QS  T ++ +       A YSPD S+I 
Sbjct: 858 LMC---EPADRIAIVNAQSYQTRQVHDFFGEIGGADYSPDGSRIW 899



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 18/148 (12%), Positives = 51/148 (34%), Gaps = 7/148 (4%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +          D    +++D+   +  + +   R    A  +S +      +  +D
Sbjct: 764 SPDGR----LRVVIGDAPDAWIIDSETGKPVQTLIGHRDYGFACAWSPDMLHIA-TSNQD 818

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           + ++I+   +     + + + +    S  +SP           E  +++ ++ +     +
Sbjct: 819 KTVNIWDARM-WRILQSIDSDIAGYRSLRFSPVGGGPRTLLMCEPADRIAIVNAQSYQTR 877

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++  D         +SP G  I      
Sbjct: 878 QV-HDFFGEIGGADYSPDGSRIWVANMD 904



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 12/94 (12%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD    V   D       +++ S      +         F   WSP    IA T    +
Sbjct: 764 SPDGRLRVVIGD---APDAWIIDSETGKPVQTLIGHRDYGFACAWSPDMLHIA-TSNQDK 819

Query: 370 KFAIGVMKKDGSQERLL----VEDSNLQAPTWSP 399
              I     D    R+L     + +  ++  +SP
Sbjct: 820 TVNIW----DARMWRILQSIDSDIAGYRSLRFSP 849


>gi|255076717|ref|XP_002502029.1| wd-40 repeat family protein/notchless protein [Micromonas sp.
           RCC299]
 gi|226517294|gb|ACO63287.1| wd-40 repeat family protein/notchless protein [Micromonas sp.
           RCC299]
          Length = 495

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 42/308 (13%), Positives = 84/308 (27%), Gaps = 69/308 (22%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + + +    R+        +    +SP+ + VA    D +  L      + 
Sbjct: 147 SGSGDTTVRLWNHETETPRHTCSGHANWVLCIAWSPDGKYVASGGMDKDVRLWDPESGSA 206

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRA----LISVQKDEAMDIYSVDLQSNATERLTNTL 301
           +    +     +  + A  +     R     L S   D  + +++V +  N    LT   
Sbjct: 207 VGGPMR---GHKKHVTALAWEPAHVRYPPVRLASASGDGTVRVWNV-VHKNCELALTAHT 262

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
               +  +      +++ + R+    + V  +      R  +           S +    
Sbjct: 263 NSVTAVKWG--GEGLIYSASRD--TTVMVWNAETGAVVRQLRGHGHWVNTLALSSE---- 314

Query: 362 AFTKFSGEKFAIGVMKKD-----------------GSQERLLVEDSNLQAPTW------- 397
            +   +G         KD                 G  ER++    +     W       
Sbjct: 315 -YVVRTGPYDHKATKPKDDVEAKAKALERYKAATGGKGERIISGSDDFTMFMWTPGTSKQ 373

Query: 398 -----------------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
                            SP GR +        D   KL+    +G N T + T      P
Sbjct: 374 PLQRMTGHVQLINHVLFSPDGRWVA---SASFDKAVKLW----DGHNGTFVATMRGHVGP 426

Query: 441 ----QWVG 444
                W  
Sbjct: 427 VYQIAWSA 434



 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 58/194 (29%), Gaps = 24/194 (12%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
           P   + +    FSP+ + +A  + D      V L +   +          + +L   +S 
Sbjct: 127 PGHAEAVLSVAFSPDGKHLASGSGDT----TVRLWNHETETPRHTCSGHANWVLCIAWSP 182

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT---------ERLTNTLFINISASYSPDSSQIVF 318
           +GK            D+   D +S +          + +T   +      Y P   ++  
Sbjct: 183 DGKYVA---SGGMDKDVRLWDPESGSAVGGPMRGHKKHVTALAWEPAHVRYPP--VRLAS 237

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S   G   + V      + +        S     W   G+ + ++        +    +
Sbjct: 238 AS---GDGTVRVWNVVHKNCELALTAHTNSVTAVKW--GGEGLIYSASRDTTVMVW-NAE 291

Query: 379 DGSQERLLVEDSNL 392
            G+  R L    + 
Sbjct: 292 TGAVVRQLRGHGHW 305



 Score = 40.0 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 40/328 (12%), Positives = 90/328 (27%), Gaps = 48/328 (14%)

Query: 120 GKDRLRVEFRLWDVKDRKQII----GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
               +  + RLWD +    +     G K   +  +W + AH     +   +    GD   
Sbjct: 188 ASGGMDKDVRLWDPESGSAVGGPMRGHKKHVTALAW-EPAHVRYPPV--RLASASGDGTV 244

Query: 176 RILFVSESVV-----------------------SGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           R+  V                            S     ++ V + +   +         
Sbjct: 245 RVWNVVHKNCELALTAHTNSVTAVKWGGEGLIYSASRDTTVMVWNAETGAVVRQLRGHGH 304

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
            +     S       Y         +       ++   K +  +++          G+R 
Sbjct: 305 WVNTLALSSE-----YVVRTGPYDHKATKPKDDVEAKAKALERYKAATGG-----KGERI 354

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            IS   D  M +++        +R+T  + +     +SPD   +   S     + + +  
Sbjct: 355 -ISGSDDFTMFMWTPGTSKQPLQRMTGHVQLINHVLFSPDGRWVASASF---DKAVKLWD 410

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
            +        +      +   WS    ++  +        +  ++    +  L      +
Sbjct: 411 GHNGTFVATMRGHVGPVYQIAWSADSRMVV-SGSKDSTLKVWSVRTKKLELDLPGHADEV 469

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A  WSP G     +     D   +L+ 
Sbjct: 470 FAVDWSPMGTK---AASGGKDKMLRLWR 494



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 62/175 (35%), Gaps = 20/175 (11%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           + R    I      +L+  FS +GK    S   D  + +++ + ++    R T +   N 
Sbjct: 119 VTRCSSAIPGHAEAVLSVAFSPDGKHLA-SGSGDTTVRLWNHETET---PRHTCSGHANW 174

Query: 306 SA--SYSPDSSQIVFESDREGKEQLYVMQ--SNGSDQKRISQDKEASYFDPVWSPQG--- 358
               ++SPD   +       G ++   +    +GS      +  +       W P     
Sbjct: 175 VLCIAWSPDGKYVA----SGGMDKDVRLWDPESGSAVGGPMRGHKKHVTALAWEPAHVRY 230

Query: 359 --DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
               +A     G      V+ K+  +  L    +++ A  W   G  LI+S  +D
Sbjct: 231 PPVRLASASGDGTVRVWNVVHKNC-ELALTAHTNSVTAVKWG--GEGLIYSASRD 282


>gi|303270931|ref|XP_003054827.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462801|gb|EEH60079.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 319

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 42/320 (13%), Positives = 89/320 (27%), Gaps = 45/320 (14%)

Query: 131 WDVKDR--KQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           +D      ++I+G K      +W +    ++              ++R+  V   V SG 
Sbjct: 5   FDTAGAISREIVGHKKKVHSVAWNRAGRKLASGSVDQ--------SARVWDVEHGVQSGK 56

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                                    + +  + P+Q  V  A+   +  LR++        
Sbjct: 57  EIE---------------LKGHSDSVDQLTWDPSQSDVL-ASVSADKTLRIWDARAAGGS 100

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
                 +     +   +S +G    +    D    +  VD + +   + T   F      
Sbjct: 101 RCVAKVDTSGENINVAWSPDGGTIAV---GDRDDVVSFVDARKHKIIKTTKFPFEVNEID 157

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +    ++        G   + V++              A  +   + P G   A      
Sbjct: 158 WDNAGARFYLT---TGLGTVEVLEFPSMTAAHTIHAHTAGCYCIAFDPTGAHFAVGSADA 214

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
               + +     S     V    L+ P    ++S  G  L  + +   D    +  +   
Sbjct: 215 ---LVSIWDARESACVRTV--PRLEWPVRTLSFSADGTYLASASE---DLFIDIADV-AT 265

Query: 425 GRNETLINTPAYASDPQWVG 444
           G     I T A ++   W  
Sbjct: 266 GECAHKITTRAASNAVAWSP 285


>gi|168001685|ref|XP_001753545.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695424|gb|EDQ81768.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 289

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 62/172 (36%), Gaps = 12/172 (6%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           + L D    +  + +   RS  ++  F   G+    S   D  + I+ +  +        
Sbjct: 74  IKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFA-SGSLDTNLKIWDIRRKGCIHTYKG 132

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           +T  IN S  +SPD   +V      G++ +  +            +  E       + P 
Sbjct: 133 HTRGIN-SIKFSPDGRWVV----SGGEDNIVKLWDLTAGKLMHDFKYHEGQVQCLDFHPH 187

Query: 358 GDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
             L+A          F +   +  GS      E + +++  ++P GR+++ +
Sbjct: 188 EFLLATGSADRTVKFFDLETFELIGSAG---PESAGVRSMVFNPDGRTVLCA 236


>gi|145250937|ref|XP_001396982.1| WD repeat protein [Aspergillus niger CBS 513.88]
 gi|134082508|emb|CAK97314.1| unnamed protein product [Aspergillus niger]
          Length = 815

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 56/149 (37%), Gaps = 10/149 (6%)

Query: 175 SRILFVSESVVSGIIKNSL------CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           SR +  + +   G ++  +       V++ D     +         F   ++P+   +A 
Sbjct: 602 SRAINCTATSPDGRLRVLIGDSADAWVVEADTGRPVHPLRGHRDFGFACAWAPDMHHIAT 661

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           +  D        + D R+ R  ++I +  +   + R+S  G      +  + A  I  V+
Sbjct: 662 SNQDK----TAIIWDVRMWRMLQKIESDVAGYRSLRWSPVGGGPRTLLLCEPADRIAVVN 717

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIV 317
            Q+    ++ +       A Y+PD S I 
Sbjct: 718 AQTYQRRQVHDFFGEIGGADYAPDGSTIW 746



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 39/100 (39%), Gaps = 5/100 (5%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +  IN +A+ SPD    V   D       +V++++        +      F   W+P   
Sbjct: 602 SRAINCTAT-SPDGRLRVLIGDSA---DAWVVEADTGRPVHPLRGHRDFGFACAWAPDMH 657

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            IA T    +   I  ++     +++  + +  ++  WSP
Sbjct: 658 HIA-TSNQDKTAIIWDVRMWRMLQKIESDVAGYRSLRWSP 696



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/152 (13%), Positives = 54/152 (35%), Gaps = 8/152 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +          D    ++++    R    +   R    A  ++ +      +  +D
Sbjct: 611 SPDGR----LRVLIGDSADAWVVEADTGRPVHPLRGHRDFGFACAWAPDMHHIA-TSNQD 665

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           +   I+ V +     +++ + +    S  +SP           E  +++ V+ +    ++
Sbjct: 666 KTAIIWDVRM-WRMLQKIESDVAGYRSLRWSPVGGGPRTLLLCEPADRIAVVNAQTYQRR 724

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           ++  D         ++P G  I +   + E F
Sbjct: 725 QV-HDFFGEIGGADYAPDGSTI-WVANTDEHF 754


>gi|260909538|ref|ZP_05916241.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260636386|gb|EEX54373.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 380

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 67/238 (28%), Gaps = 34/238 (14%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS--------SNGKRAL 273
           + + +  A Y   DI    L      +   +   FR    A   S         +GK   
Sbjct: 136 DGKCLITANYSGGDISAFKLDKQGRLQGTAQQTRFRGRDSA-AVSHIHCGLPTPDGKY-- 192

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTN-TLFINI----SA---SYSPDSSQIVFESDREGK 325
                     I+  D   N TE L   T+   +         ++      +   ++  G 
Sbjct: 193 FLATDLGNDRIHRFDFTPNGTEVLAQPTVAYEVKRGEGPRHITFDKGGRYLYLINELGGT 252

Query: 326 EQLYVMQSNGSDQKRISQ-----DKEASYFDPVWSPQGDLIAFTKF-SGEKFAIGVMKKD 379
               VM+ N      +              D   SP G  +  +     +  AI  +   
Sbjct: 253 --CVVMRYNDGQLTEMQTLMADEGGGRGSADIHISPDGKFLYTSHRLKKDGIAIFAINPQ 310

Query: 380 GSQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
                 +        P   T +P+G+ L+ + + D      +     + R   L NT 
Sbjct: 311 TGLLTKVGYQQTGIHPRNFTITPNGKYLLVACRDDN----AIQIFRRDTRTGLLTNTG 364



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 61/230 (26%), Gaps = 41/230 (17%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA-LISVQKDEAMDIY 285
            Y        + VY  +        R             S NG R   +S   D     Y
Sbjct: 35  TYTQDSPSKGIYVYRFNQDTGNFSLRSSVKAGNPSFVTLSPNGNRLYAVSEFNDGRQGAY 94

Query: 286 SVDLQSNATERLTNTLFINI-----------SASYSP-----DSSQIVFESDREGKEQLY 329
           S D     T +L+N +F++                 P     D   ++  +   G    +
Sbjct: 95  SFDFD-PKTGQLSNPIFVSTKAGDRFDDPENQPGSDPCNLYTDGKCLITANYSGGDISAF 153

Query: 330 VMQSNG---SDQKRISQDKEASYFDPVW-----SPQGDLIAFTKFSGEKFAIGVMKKDGS 381
            +   G      ++       S           +P G     T    ++        +G+
Sbjct: 154 KLDKQGRLQGTAQQTRFRGRDSAAVSHIHCGLPTPDGKYFLATDLGNDRIHRFDFTPNGT 213

Query: 382 ----QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
               Q  +  E    + P      R + F   K G     LY I+  G  
Sbjct: 214 EVLAQPTVAYEVKRGEGP------RHITF--DKGGRY---LYLINELGGT 252



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 40/85 (47%), Gaps = 8/85 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALIS 275
            SP+ + +  +    +D + ++ ++ +     K    ++   + PR    + NGK  L++
Sbjct: 284 ISPDGKFLYTSHRLKKDGIAIFAINPQTGLLTKV--GYQQTGIHPRNFTITPNGKYLLVA 341

Query: 276 VQKDEAMDIYSVDLQSNATERLTNT 300
            + D A+ I+  D ++     LTNT
Sbjct: 342 CRDDNAIQIFRRDTRTG---LLTNT 363


>gi|225712316|gb|ACO12004.1| LTS8 homolog [Lepeophtheirus salmonis]
          Length = 365

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 77/218 (35%), Gaps = 25/218 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            SP+   +    +    I      +  +   PK     +  ++   F   GK   I+ + 
Sbjct: 89  ISPDGGLLVAGGHQCIKIYHTNNTNDVLLEYPKL----KKNVMDVGFHEEGKWMYIAGE- 143

Query: 279 DEAMDIYSVDLQSNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           D  + I+ +    N    L +T      +    P+  +++   D  G   ++ ++++ S+
Sbjct: 144 DGTIQIWDIRALDNVRYPLLHTIKAPATTVQLHPNQQELI-IGDALGNVHIWNLRADKSE 202

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-------------DGSQER 384
               +   E+   D   +P G  +AF   +G  F I + +              D  +  
Sbjct: 203 T--FTPATESVINDISVNPSGTHLAFVNNTGNCFVIPLKEAPKESKNPIRTGICDDEKTE 260

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +           +SP G+ L  +     D  SKL++ D
Sbjct: 261 IQAHKKYALRCKFSPDGKILATTS---ADQTSKLWNTD 295


>gi|159476580|ref|XP_001696389.1| nucleolar protein, component of the U3 processome [Chlamydomonas
           reinhardtii]
 gi|158282614|gb|EDP08366.1| nucleolar protein, component of the U3 processome [Chlamydomonas
           reinhardtii]
 gi|294845996|gb|ADF43155.1| UTP1p [Chlamydomonas reinhardtii]
          Length = 996

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 56/167 (33%), Gaps = 12/167 (7%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   +     D   +L      T +        +F+  +   RFS +G+   ++V + 
Sbjct: 60  SPDGTLLVSVDKDGRALLINRKRQTLLHHF-----SFKGPVACARFSPDGRYIAVAVGRL 114

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNG 335
             +       +     +L  T     S     ++SPD + +   S         +    G
Sbjct: 115 VQVWCCPTPDKQMNPMQLHRTYGQCHSDVLDIAWSPDGAFLAAASKDITLRVFSLNPIPG 174

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDGS 381
            +   +   K+A       SP   ++A     G +   +  +  DGS
Sbjct: 175 YEPPTLCGHKDALLGVFFASP--AMLAKGTADGGEAPCLYSLSVDGS 219



 Score = 40.4 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 37/217 (17%), Positives = 64/217 (29%), Gaps = 10/217 (4%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L V +                +    FSP+   +A    D +    V +          
Sbjct: 404 QLLVWEWRSETYVLKQQGHYHDITTTAFSPDGALIATGADDCK----VKVFQQSSGFCFV 459

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
              +  + + A  F  +G  AL+S   D  +  + + ++      LT         S + 
Sbjct: 460 TFSDHSAPVTAVTFLPSG-HALLSASLDGTVRAWDL-VRYRNFRTLTA-PSPVQFGSLAV 516

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D +  V  +      Q+YV          +    E       +SP   L+A   +     
Sbjct: 517 DPAGEVVCAGTVDTFQIYVWSLKTGRLLDVLAGHEGPVSALAFSPITSLLASGSWDRTVR 576

Query: 372 AIGVM---KKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              V       GS   +L    ++ A    P GR L 
Sbjct: 577 TWDVYGGGGGGGSAGDVLDHRHDVLALAMRPDGRQLA 613



 Score = 36.5 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 10/90 (11%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++  +    S  K +  +          SP G L+      G    I        + +
Sbjct: 30  GNRVGQVNLTESTSKCLPFENLTQIRVLCASPDGTLLVSVDKDGRALLIN------RKRQ 83

Query: 385 LLVEDSNLQAPT----WSPSGRSLIFSRKK 410
            L+   + + P     +SP GR +  +  +
Sbjct: 84  TLLHHFSFKGPVACARFSPDGRYIAVAVGR 113


>gi|154492586|ref|ZP_02032212.1| hypothetical protein PARMER_02220 [Parabacteroides merdae ATCC
           43184]
 gi|154087811|gb|EDN86856.1| hypothetical protein PARMER_02220 [Parabacteroides merdae ATCC
           43184]
          Length = 812

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/199 (13%), Positives = 63/199 (31%), Gaps = 16/199 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A   +    RD+      +  +  +  + T    D+ R+ +    + +          M 
Sbjct: 331 ARKPWRQKDRDRKEVASVWLGDNNR-FFVTRSSRDLHRIDICSYTVGQDSICPIIEERMN 389

Query: 261 LAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
                       +GK  +   ++D    +Y  D + N   R+T   +         ++ +
Sbjct: 390 TYQEVRPLAAVGDGKELIQWSERDGWAHLYLYDGEGNLKNRITRGPWHVDQIVKVDEAKR 449

Query: 316 IVF----ESDREGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +V+      +++       LY +  +GS  ++++      YF  V            +S 
Sbjct: 450 VVYFLANGKEKDENPYYEHLYRVGLDGSGLQQVT---PGDYFHTVSMDDNAAFVVNNYSR 506

Query: 369 EKFAIGVMKKDGSQERLLV 387
                     D +  +L+ 
Sbjct: 507 VNTIPRTDLMDSNGRKLMT 525



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 38/308 (12%), Positives = 98/308 (31%), Gaps = 45/308 (14%)

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
            +S + Y+ +  +K D +S +  +  +     +K+          N   L   + + ++ 
Sbjct: 196 RMSREDYEKL--KKDDKDSTVTDIQLTTFG--VKDFGFGQPYSLLNTDTLCNGKRKGVWG 251

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG---NFRSMILAPRFSSNGKRAL 273
             +SP+ +  A    D+  +  ++++++     P              AP      +   
Sbjct: 252 IVWSPDSRYFAVTVEDERAVKDLWVINSMASPRPTLETYKYQMPGEKEAPV-----QHLF 306

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFI-------NISASYSPDSSQ-IVFESDREGK 325
           +    D +          + T RL    +         +++ +  D+++  V  S R+  
Sbjct: 307 LFDMNDNSYKEIRTSAFKDQTLRLARKPWRQKDRDRKEVASVWLGDNNRFFVTRSSRDLH 366

Query: 326 EQLYVMQSNGSD------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                  + G D      ++R++  +E      V    G  +           + +   +
Sbjct: 367 RIDICSYTVGQDSICPIIEERMNTYQEVRPLAAVG--DGKELIQWSERDGWAHLYLYDGE 424

Query: 380 GSQERLLVEDSNL-----------QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           G+ +  +                 +   +  +G+      K +      LY + L+G   
Sbjct: 425 GNLKNRITRGPWHVDQIVKVDEAKRVVYFLANGK-----EKDENPYYEHLYRVGLDGSGL 479

Query: 429 TLINTPAY 436
             + TP  
Sbjct: 480 QQV-TPGD 486


>gi|114588833|ref|XP_516691.2| PREDICTED: WD repeat-containing protein 5B [Pan troglodytes]
          Length = 330

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 80/221 (36%), Gaps = 20/221 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +   +FSPN + +A ++ D      + +      +  K +      I    +
Sbjct: 36  TLVGHTEAVSSVKFSPNGEWLASSSADR----LIIIWGAYDGKYEKTLYGHNLEISDVAW 91

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREG 324
           SS+  R + S   D+ + ++  D++S    + L          +++P S+ I+  S    
Sbjct: 92  SSDSSRLV-SASDDKTLKLW--DVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSF--- 145

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-E 383
            E + + +       +             ++  G LI    + G      +      Q  
Sbjct: 146 DETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDG---LCRIWDAASGQCL 202

Query: 384 RLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           + LV+D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 KTLVDDDNPPVSFVKFSPNGKYILTATL---DNTLKLWDYS 240



 Score = 43.9 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 61/172 (35%), Gaps = 9/172 (5%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG   + L    +  + +  +S +  ++  A+ D      + L D R  +  K +    
Sbjct: 71  YDGKYEKTLY-GHNLEISDVAWSSDSSRLVSASDDK----TLKLWDVRSGKCLKTLKGHS 125

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           + +    F+      +IS   DE + I+ V       + L+       +  ++   S IV
Sbjct: 126 NYVFCCNFNPP-SNLIISGSFDETVKIWEV-KTGKCLKTLSAHSDPVSAVHFNCSGSLIV 183

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             S  +G  +++   ++G   K +  D         +SP G  I        
Sbjct: 184 SGSY-DGLCRIWDA-ASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNT 233


>gi|23199987|ref|NP_061942.2| WD repeat-containing protein 5B [Homo sapiens]
 gi|74762455|sp|Q86VZ2|WDR5B_HUMAN RecName: Full=WD repeat-containing protein 5B
 gi|27695090|gb|AAH43494.1| WD repeat domain 5B [Homo sapiens]
 gi|48146675|emb|CAG33560.1| WDR5B [Homo sapiens]
 gi|119599891|gb|EAW79485.1| WD repeat domain 5B [Homo sapiens]
 gi|189054800|dbj|BAG37626.1| unnamed protein product [Homo sapiens]
 gi|261861516|dbj|BAI47280.1| WD repeat domain 5B [synthetic construct]
          Length = 330

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 80/221 (36%), Gaps = 20/221 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +   +FSPN + +A ++ D      + +      +  K +      I    +
Sbjct: 36  TLVGHTEAVSSVKFSPNGEWLASSSADR----LIIIWGAYDGKYEKTLYGHNLEISDVAW 91

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREG 324
           SS+  R + S   D+ + ++  D++S    + L          +++P S+ I+  S    
Sbjct: 92  SSDSSRLV-SASDDKTLKLW--DVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSF--- 145

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-E 383
            E + + +       +             ++  G LI    + G      +      Q  
Sbjct: 146 DETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDG---LCRIWDAASGQCL 202

Query: 384 RLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           + LV+D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 KTLVDDDNPPVSFVKFSPNGKYILTATL---DNTLKLWDYS 240



 Score = 43.9 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 61/172 (35%), Gaps = 9/172 (5%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG   + L    +  + +  +S +  ++  A+ D      + L D R  +  K +    
Sbjct: 71  YDGKYEKTLY-GHNLEISDVAWSSDSSRLVSASDDK----TLKLWDVRSGKCLKTLKGHS 125

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           + +    F+      +IS   DE + I+ V       + L+       +  ++   S IV
Sbjct: 126 NYVFCCNFNPP-SNLIISGSFDETVKIWEV-KTGKCLKTLSAHSDPVSAVHFNCSGSLIV 183

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             S  +G  +++   ++G   K +  D         +SP G  I        
Sbjct: 184 SGSY-DGLCRIWDA-ASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNT 233


>gi|7023854|dbj|BAA92110.1| unnamed protein product [Homo sapiens]
          Length = 330

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 80/221 (36%), Gaps = 20/221 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +   +FSPN + +A ++ D      + +      +  K +      I    +
Sbjct: 36  TLVGHTEAVSSVKFSPNGEWLASSSADR----LIIIWGAYDGKYEKTLYGHNLEISDVAW 91

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREG 324
           SS+  R + S   D+ + ++  D++S    + L          +++P S+ I+  S    
Sbjct: 92  SSDSSRLV-SASDDKTLKLW--DVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSF--- 145

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-E 383
            E + + +       +             ++  G LI    + G      +      Q  
Sbjct: 146 DETVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDG---LCRIWDAASGQCL 202

Query: 384 RLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           + LV+D N  +    +SP+G+ ++ +     D   KL+   
Sbjct: 203 KTLVDDDNPPVSFVKFSPNGKYILTATL---DNTLKLWDYS 240



 Score = 43.9 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 61/172 (35%), Gaps = 9/172 (5%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
            DG   + L    +  + +  +S +  ++  A+ D      + L D R  +  K +    
Sbjct: 71  YDGKYEKTLY-GHNLEISDVAWSSDSSRLVSASDDK----TLKLWDVRSGKCLKTLKGHS 125

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           + +    F+      +IS   DE + I+ V       + L+       +  ++   S IV
Sbjct: 126 NYVFCCNFNPP-SNLIISGSFDETVKIWEV-KTGKCLKTLSAHSDPVSAVHFNCSGSLIV 183

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
             S  +G  +++   ++G   K +  D         +SP G  I        
Sbjct: 184 SGSY-DGLCRIWDA-ASGQCLKTLVDDDNPPVSFVKFSPNGKYILTATLDNT 233


>gi|327267284|ref|XP_003218432.1| PREDICTED: autophagy-related protein 16-1-like isoform 3 [Anolis
           carolinensis]
          Length = 588

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 102/312 (32%), Gaps = 55/312 (17%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
               L    +LW+V      +      S A    I     D     +     DF SRI  
Sbjct: 319 ATGGLDRRVKLWEVCGDNCELKASLSGSNAGITSIE---YDSAGSYLLAASNDFASRIWT 375

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V                  D   +R+        +   +F  +  ++   ++D      +
Sbjct: 376 V------------------DDHRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDR----TL 413

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS----NATE 295
            L D R     K +    S           ++ ++S   D+ +  +  D+++       E
Sbjct: 414 KLWDLRSKVCIKTVFAGSSCNDLVC----TEQCVMSGHFDKKIRFW--DIRTECVVREIE 467

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-----SYF 350
            L     ++++          +    R+  + L ++    +  K+ +   +       + 
Sbjct: 468 LLGRITALDLNPE-----RTELLTCSRD--DLLKIIDLRVNAVKQ-TFSAQGFKCGSDWT 519

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSR 408
             V+SP G+ +A     G  +   V    G  ER+L     +++ A  WSPSG  ++   
Sbjct: 520 RVVFSPDGNYVAAGSAEGSLYIWNV--LTGKVERILSKHHSNSINAVAWSPSGTHVV--- 574

Query: 409 KKDGDTGSKLYS 420
             D    + L+S
Sbjct: 575 SVDKGNKAVLWS 586


>gi|327267282|ref|XP_003218431.1| PREDICTED: autophagy-related protein 16-1-like isoform 2 [Anolis
           carolinensis]
          Length = 623

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 102/312 (32%), Gaps = 55/312 (17%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
               L    +LW+V      +      S A    I     D     +     DF SRI  
Sbjct: 354 ATGGLDRRVKLWEVCGDNCELKASLSGSNAGITSIE---YDSAGSYLLAASNDFASRIWT 410

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V                  D   +R+        +   +F  +  ++   ++D      +
Sbjct: 411 V------------------DDHRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDR----TL 448

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS----NATE 295
            L D R     K +    S           ++ ++S   D+ +  +  D+++       E
Sbjct: 449 KLWDLRSKVCIKTVFAGSSCNDLVC----TEQCVMSGHFDKKIRFW--DIRTECVVREIE 502

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-----SYF 350
            L     ++++          +    R+  + L ++    +  K+ +   +       + 
Sbjct: 503 LLGRITALDLNPE-----RTELLTCSRD--DLLKIIDLRVNAVKQ-TFSAQGFKCGSDWT 554

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSR 408
             V+SP G+ +A     G  +   V    G  ER+L     +++ A  WSPSG  ++   
Sbjct: 555 RVVFSPDGNYVAAGSAEGSLYIWNV--LTGKVERILSKHHSNSINAVAWSPSGTHVV--- 609

Query: 409 KKDGDTGSKLYS 420
             D    + L+S
Sbjct: 610 SVDKGNKAVLWS 621


>gi|327267280|ref|XP_003218430.1| PREDICTED: autophagy-related protein 16-1-like isoform 1 [Anolis
           carolinensis]
          Length = 607

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 51/312 (16%), Positives = 102/312 (32%), Gaps = 55/312 (17%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
               L    +LW+V      +      S A    I     D     +     DF SRI  
Sbjct: 338 ATGGLDRRVKLWEVCGDNCELKASLSGSNAGITSIE---YDSAGSYLLAASNDFASRIWT 394

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V                  D   +R+        +   +F  +  ++   ++D      +
Sbjct: 395 V------------------DDHRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDR----TL 432

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS----NATE 295
            L D R     K +    S           ++ ++S   D+ +  +  D+++       E
Sbjct: 433 KLWDLRSKVCIKTVFAGSSCNDLVC----TEQCVMSGHFDKKIRFW--DIRTECVVREIE 486

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-----SYF 350
            L     ++++          +    R+  + L ++    +  K+ +   +       + 
Sbjct: 487 LLGRITALDLNPE-----RTELLTCSRD--DLLKIIDLRVNAVKQ-TFSAQGFKCGSDWT 538

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSR 408
             V+SP G+ +A     G  +   V    G  ER+L     +++ A  WSPSG  ++   
Sbjct: 539 RVVFSPDGNYVAAGSAEGSLYIWNV--LTGKVERILSKHHSNSINAVAWSPSGTHVV--- 593

Query: 409 KKDGDTGSKLYS 420
             D    + L+S
Sbjct: 594 SVDKGNKAVLWS 605


>gi|322710750|gb|EFZ02324.1| putative histone transcription regulator [Metarhizium anisopliae
           ARSEF 23]
          Length = 1045

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 80/237 (33%), Gaps = 42/237 (17%)

Query: 219 FSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKR 271
            SP+ +++A A             ++         P+++    +    I + RFS NG+ 
Sbjct: 25  ISPDGKRLATAGGDGHVRVWSTDAIFNAKDASYTKPRQLCHMSHHLGTIHSVRFSPNGRY 84

Query: 272 ALISVQKDEAMDIYSVDLQ---------------SNATERLTNTLFINISASYSPDSS-- 314
              S   D+ + +Y +D                     +RL          ++SPDSS  
Sbjct: 85  LA-SGADDKLICVYHLDKAPAIAFGNNDPPPAENWKTYKRLIGHENDVQDLAWSPDSSLL 143

Query: 315 -------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT--- 364
                  ++V  S     E+L  + ++ S  K I+ D  A+ F    S    +  F    
Sbjct: 144 VSVGLDSKVVVWSGYT-FEKLKAIPAHQSHVKGITFD-PANKFFATASDDRTIKIFRYTP 201

Query: 365 ----KFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
                   +     V++   S   +     +  +  +WSP G  +  +   +G   S
Sbjct: 202 PAPNSTQHDMINNFVLETTISAPFKSSPLTTYFRRCSWSPDGNHIAAANAVNGPVSS 258



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 35/126 (27%), Gaps = 39/126 (30%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---------SQERLL----VEDSNLQAPT 396
           +    SP G  +A    +G    + V   D          ++ R L         + +  
Sbjct: 21  YSCHISPDGKRLA---TAGGDGHVRVWSTDAIFNAKDASYTKPRQLCHMSHHLGTIHSVR 77

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLN-------GRN-----------ETLINTPAYAS 438
           +SP+GR L       G     +    L+       G N           + LI       
Sbjct: 78  FSPNGRYLA-----SGADDKLICVYHLDKAPAIAFGNNDPPPAENWKTYKRLIGHENDVQ 132

Query: 439 DPQWVG 444
           D  W  
Sbjct: 133 DLAWSP 138



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 36/245 (14%), Positives = 81/245 (33%), Gaps = 46/245 (18%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             +  + +  +SP+   +     D +    V +         K I   +S +    F   
Sbjct: 126 GHENDVQDLAWSPDSSLLVSVGLDSK----VVVWSGYTFEKLKAIPAHQSHVKGITFDPA 181

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERL----------TNTLFINISA--------SYS 310
            K    +   D  + I+     +  + +           T +     S         S+S
Sbjct: 182 NKFFA-TASDDRTIKIFRYTPPAPNSTQHDMINNFVLETTISAPFKSSPLTTYFRRCSWS 240

Query: 311 PDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSP------------- 356
           PD + I   +   G    + +++    D +      EA     ++SP             
Sbjct: 241 PDGNHIAAANAVNGPVSSVAIIERTRWDSEINLIGHEAPTEVCMFSPRLFHTVKPDENAT 300

Query: 357 -QGD----LIAFTKFSGEKFAIGVMKKDGSQERLLVED---SNLQAPTWSPSGRSLIFSR 408
             G     L+     +G+   + +   + S+  ++++D    ++   +W+P G++L F+ 
Sbjct: 301 SNGTSNPLLVTVAATAGQDKTLCIWNTNTSRPVVVLQDLSSKSISDLSWAPDGQTL-FAA 359

Query: 409 KKDGD 413
             DG 
Sbjct: 360 SLDGG 364


>gi|300175995|emb|CBK22212.2| unnamed protein product [Blastocystis hominis]
          Length = 226

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 17/121 (14%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD------LQSNATERLTNTL 301
           R  + + +F+  I   R++ NG    +S          + +      L+        +  
Sbjct: 34  RLSRTLSSFKGPISCVRYAPNGSLLAVSSADRSISIFETANYSLKFILEG-------HEK 86

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +N  A +SPDS  +   SD    +   +  S      RI            ++P+G +I
Sbjct: 87  GVNYIA-WSPDSKYLASCSD---DKTARIWNSETGSLVRIFNTFSQFPTCIAYNPRGTII 142

Query: 362 A 362
           A
Sbjct: 143 A 143


>gi|284042231|ref|YP_003392571.1| hypothetical protein Cwoe_0763 [Conexibacter woesei DSM 14684]
 gi|283946452|gb|ADB49196.1| hypothetical protein Cwoe_0763 [Conexibacter woesei DSM 14684]
          Length = 421

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 68/217 (31%), Gaps = 31/217 (14%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ-KVAYATYDDEDILRVYLMDTRIDRA 249
            +L V+  DG+  R L   R      P + P    +   A       + +  +D  +   
Sbjct: 192 RTLRVVAGDGSGDRLL--DRASAPVTPSWRPGPTAEHVLAYARPGGRVELRDVDRPVAGG 249

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-S 308
              IG+   +      S +    L+ ++      +  +D       RL         A +
Sbjct: 250 RTLIGSGPPVRALAWVSPD---RLLVLRGGG---LSLLDAAGRVLSRLPGPSAGRFHALT 303

Query: 309 YSPDSSQIVFE--SDREGKEQLY--VMQSNG--------------SDQKRISQDKEASYF 350
            SP S    F   S R     ++     ++G                + R+      +  
Sbjct: 304 ASPVSRTAAFVRSSPRGATSVVWSVRFPADGPTRPAAGPTRPGLLGGRARMVFAGAGTIR 363

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
              +SP G  +AF     ++    + ++ G + RL  
Sbjct: 364 SLAFSPDGRWLAFAWPPSDQ---WIFERVGGRPRLAT 397



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/214 (17%), Positives = 70/214 (32%), Gaps = 37/214 (17%)

Query: 218 RFS-PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN--GKRALI 274
            +S  +  +VAY        LRV   D   D    R+ +  S  + P +      +  L 
Sbjct: 177 AWSRGDGYRVAY---RSGRTLRVVAGDGSGD----RLLDRASAPVTPSWRPGPTAEHVLA 229

Query: 275 SVQKDEAMDIYSVDLQ-SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             +    +++  VD   +     + +   +   A  SPD   ++    R G   L ++ +
Sbjct: 230 YARPGGRVELRDVDRPVAGGRTLIGSGPPVRALAWVSPDRLLVL----RGGG--LSLLDA 283

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS--GEKFAIGVMK-------------- 377
            G    R+       +     SP     AF + S  G    +  ++              
Sbjct: 284 AGRVLSRLPGPSAGRFHALTASPVSRTAAFVRSSPRGATSVVWSVRFPADGPTRPAAGPT 343

Query: 378 ----KDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                 G    +      +++  +SP GR L F+
Sbjct: 344 RPGLLGGRARMVFAGAGTIRSLAFSPDGRWLAFA 377


>gi|242056607|ref|XP_002457449.1| hypothetical protein SORBIDRAFT_03g007500 [Sorghum bicolor]
 gi|241929424|gb|EES02569.1| hypothetical protein SORBIDRAFT_03g007500 [Sorghum bicolor]
          Length = 610

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/104 (17%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S+S SPD ++ V    ++GK ++Y +  +   ++ + +    +     +SP    ++  
Sbjct: 452 TSSSVSPDGTEAV-VGAQDGKLRIYSISGDTLTEEALLEKHRGAITSIHYSPD---VSMF 507

Query: 365 KFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLI 405
             +       V  +   + +L   L   + + +  WSP  R + 
Sbjct: 508 ASADSNREAVVWDRASREIKLKNMLYHTARINSLAWSPDSRLVA 551



 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 41/128 (32%), Gaps = 6/128 (4%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVF 318
           I +   S +G  A++  Q D  + IYS+   +      L        S  YSPD S    
Sbjct: 451 ITSSSVSPDGTEAVVGAQ-DGKLRIYSISGDTLTEEALLEKHRGAITSIHYSPDVSMFA- 508

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQD-KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
               +   +  V      + K  +     A      WSP   L+A            + K
Sbjct: 509 --SADSNREAVVWDRASREIKLKNMLYHTARINSLAWSPDSRLVATGSLDTCAIVYEIDK 566

Query: 378 KDGSQERL 385
              S+  +
Sbjct: 567 PATSRITI 574



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 41/270 (15%), Positives = 78/270 (28%), Gaps = 72/270 (26%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P    +AY T        V +             +        RFS NG+    S     
Sbjct: 26  PKTDTIAYCT-----GRSVIIRRLDAPLDAWAYQDHAYPTTVARFSPNGEWVA-SADASG 79

Query: 281 AMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE--QLYVMQS--- 333
            + ++    D    A  R  +    ++   +SPD  +IV   D +GK   + +V  S   
Sbjct: 80  CVRVWGRYGDRALKAEFRPLSGRVDDL--RWSPDGLRIVVSGDGKGKSFVRAFVWDSGST 137

Query: 334 ----NGSDQKRIS----------------------------------QDKEASYFDPVWS 355
               +G  ++ +S                                  +D         ++
Sbjct: 138 VGEFDGHSKRVLSCDFKPTRPFRIVTCGEDFLANFYEGPPFKFKHSIRDHSNFVNCIRYA 197

Query: 356 PQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           P G          +           IG +  +G          ++ A +WS   + ++  
Sbjct: 198 PDGSKFITVSSDKKGLIYDGKTGEKIGELSTEGG------HTGSIYAVSWSSDSKQVL-- 249

Query: 408 RKKDGDTGSKLYSI--DLNGRNETLINTPA 435
                D  +K++ I  D +G+    +  P 
Sbjct: 250 -TVSADKSAKVWDIMEDASGKLNRTLACPG 278



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/156 (14%), Positives = 53/156 (33%), Gaps = 18/156 (11%)

Query: 201 ANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            N + ++ ++ +  +     SP+  +      D +  LR+Y +          +   R  
Sbjct: 437 HNSKVISTTKVNYTITSSSVSPDGTEAVVGAQDGK--LRIYSISGDTLTEEALLEKHRGA 494

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISASYSPDSS--- 314
           I +  +S +     +    D   +    D  S     + +        S ++SPDS    
Sbjct: 495 ITSIHYSPD---VSMFASADSNREAVVWDRASREIKLKNMLYHTARINSLAWSPDSRLVA 551

Query: 315 -------QIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                   IV+E D+    ++ +  ++      ++ 
Sbjct: 552 TGSLDTCAIVYEIDKPATSRITIKGAHLGGVHGLTF 587



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 5/102 (4%)

Query: 198 RDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            +G   ++    RD   F    R++P+  K    + D + ++       +I       G 
Sbjct: 173 YEGPPFKFKHSIRDHSNFVNCIRYAPDGSKFITVSSDKKGLIYDGKTGEKIGELSTE-GG 231

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATER 296
               I A  +SS+ K+ L +V  D++  ++  ++  S    R
Sbjct: 232 HTGSIYAVSWSSDSKQVL-TVSADKSAKVWDIMEDASGKLNR 272


>gi|229496999|ref|ZP_04390704.1| immunogenic 75 kDa protein PG4 [Porphyromonas endodontalis ATCC
           35406]
 gi|229316101|gb|EEN82029.1| immunogenic 75 kDa protein PG4 [Porphyromonas endodontalis ATCC
           35406]
          Length = 691

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 41/282 (14%), Positives = 79/282 (28%), Gaps = 54/282 (19%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILR-------------VYLMDTRIDRAPKRIGN 255
           +  +  F   F P+     Y++  +++                 Y+      R  +    
Sbjct: 170 NSSRSDFGGAFLPDGSAFIYSSARNKNPEIENSAITGEKPNDLYYIHQDAQGRWSRPDSI 229

Query: 256 FRSMILA-----PRFSSNGKRALISVQK-----DEAMDIYSVD-------LQSNATERLT 298
              +  +     P  S +G     ++ +     D    IY                E  +
Sbjct: 230 SGGINTSNDEGMPAVSPDGNTLYYTMAEYSDLYDRTAKIYKSSKSGEGGWSAGKELEIWS 289

Query: 299 NTLFINISASYSPDSSQIVFESDRE-GKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSP 356
           +TL +    + S    ++ F S+   G + +Y +          +    A +      SP
Sbjct: 290 DTLRMAAHPALSVSGEKLYFVSEGGYGGKDIYYINVEEIGSAVPTNIGGAINTPGNEISP 349

Query: 357 Q--GDLIAFTKFSG----EKFAIGVMKKDGSQERL-------LVEDSNLQAPTWSP---- 399
              GD   +    G      + +       S E L       L    +  A T +P    
Sbjct: 350 FAVGDSTLYFASDGHPGLGGYDLYRATLQSSGEWLCEHLGAPLNSPQDDYAMTLNPKPDK 409

Query: 400 -SGRSLIFSRKKDGDTG-SKLYSIDLNGRNETLINTPAYASD 439
            +     FS  +    G   L+S     +   L     + SD
Sbjct: 410 NNTSEGYFSSSRQDAWGRPHLWSFT---QPAILTILEGFVSD 448


>gi|224065840|ref|XP_002190584.1| PREDICTED: N-acylaminoacyl-peptide hydrolase [Taeniopygia guttata]
          Length = 727

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 58/172 (33%), Gaps = 27/172 (15%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSNGKRALI-- 274
            +S ++  + Y           +      +               AP     G++ +   
Sbjct: 248 AWSHSETHLVYVAEKKRPKAESFFQSKAPELGTSDEDTGHPKKEDAPV---KGEQFVYHE 304

Query: 275 ----SVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFES-----DR 322
               ++       +  +D++ N+   L   +  ++S     +SP+ + +VF        R
Sbjct: 305 DWGETLSTRSVPVLCVLDIEGNSISVL-EGIPEHLSPGQAFWSPEDTGVVFVGWWHDPFR 363

Query: 323 EG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            G       +  L+ +   G   + +S+D  A +  P  SP G  I + + +
Sbjct: 364 LGLRHCTNRRSALFYVDLTGGRCELLSEDSRAVW-SPRLSPDGCRIVYLENN 414



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 30/155 (19%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK------EQL 328
           S  + +A ++ + D  +   ++         +        Q V+  D            L
Sbjct: 269 SFFQSKAPELGTSDEDTGHPKK-------EDAPV---KGEQFVYHEDWGETLSTRSVPVL 318

Query: 329 YVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGV------------ 375
            V+   G+    +    E  S     WSP+   + F  +  + F +G+            
Sbjct: 319 CVLDIEGNSISVLEGIPEHLSPGQAFWSPEDTGVVFVGWWHDPFRLGLRHCTNRRSALFY 378

Query: 376 MKKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRK 409
           +   G +  LL EDS  + +P  SP G  +++   
Sbjct: 379 VDLTGGRCELLSEDSRAVWSPRLSPDGCRIVYLEN 413


>gi|225437032|ref|XP_002278415.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 315

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 82/236 (34%), Gaps = 19/236 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +     + D+ +   +FS +   +A A+ D      + +  ++      R+      I
Sbjct: 16  YRLLRTLAAHDRAVSCVKFSSDGTLLASASLDK----TLIVWSSQTLTLKSRLVGHSGGI 71

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+      S   D  + I+  D QS    + L     +    +++P S+ IV  
Sbjct: 72  SDLAWSSDSHYIC-SASDDLTLRIW--DAQSAECVKTLRGHTDLVFCVNFNPQSNLIVSG 128

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +                       ++  G LI      G    I      
Sbjct: 129 SF---DETVRIWDVKTGRPLHTIAAHSMPVTSVYFNRDGSLIVSGSHDGS-CKIWASDT- 183

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G+  + L+ED+   +    +SP+G+ ++ +   D     KL++    G++  +   
Sbjct: 184 GALLKTLIEDNGPAISFAKFSPNGKYILVATLDD---TLKLWNYS-TGKSLKIYTG 235



 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 72/197 (36%), Gaps = 12/197 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    ++ + D       +   +    +    F+ +   +   ++D     +++  DT
Sbjct: 126 VSGSFDETVRIWDVKTGRPLHTIAAHSMPVTSVYFNRDGSLIVSGSHD--GSCKIWASDT 183

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LF 302
                     N  ++  A +FS NGK  L++   D+ + +++      + +  T      
Sbjct: 184 GALLKTLIEDNGPAISFA-KFSPNGKYILVAT-LDDTLKLWNYS-TGKSLKIYTGHVNKV 240

Query: 303 INISASYSPD-SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             I++++S      IV  S+    + +YV    G +  +  +    +       P  + I
Sbjct: 241 YCIASAFSVTYGKYIVSGSE---DKCVYVWDLQGKNPLQKLEGHTDTVISVSCHPNENKI 297

Query: 362 AFTKFSGEK-FAIGVMK 377
           A     G+K   I V  
Sbjct: 298 ASAGLDGDKTVRIWVQD 314



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 81/220 (36%), Gaps = 40/220 (18%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                   R+WDVK  + +                HTI+       +          ++ 
Sbjct: 127 SGSFDETVRIWDVKTGRPL----------------HTIAAHSMPVTS----------VYF 160

Query: 181 SESV---VSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +      VSG    S  +   D GA ++ L       +   +FSPN + +  AT DD   
Sbjct: 161 NRDGSLIVSGSHDGSCKIWASDTGALLKTLIEDNGPAISFAKFSPNGKYILVATLDD--- 217

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             + L +    ++ K      + +  +A  FS    + ++S  +D+ + ++  DLQ    
Sbjct: 218 -TLKLWNYSTGKSLKIYTGHVNKVYCIASAFSVTYGKYIVSGSEDKCVYVW--DLQGKNP 274

Query: 295 -ERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQ 332
            ++L       IS S  P+ ++I     D +   +++V  
Sbjct: 275 LQKLEGHTDTVISVSCHPNENKIASAGLDGDKTVRIWVQD 314


>gi|68471673|ref|XP_720143.1| likely COPII vesicle coat component [Candida albicans SC5314]
 gi|68471936|ref|XP_720011.1| likely COPII vesicle coat component [Candida albicans SC5314]
 gi|46441861|gb|EAL01155.1| likely COPII vesicle coat component [Candida albicans SC5314]
 gi|46441998|gb|EAL01291.1| likely COPII vesicle coat component [Candida albicans SC5314]
          Length = 370

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 36/267 (13%), Positives = 82/267 (30%), Gaps = 31/267 (11%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N+  +  + D ++ +       +++A  + D + I    L  T   +    +      +
Sbjct: 71  YNMVTIGNAHDDLIHDAVLDYYGKRLATCSSD-KTIKIFDLDGTDNYKLITTLTGHEGPV 129

Query: 261 LAPRFS-SNGKRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPD--SS 314
               ++       L S   D    I+    ++     +   T       S S++P    +
Sbjct: 130 WQVSWAHPKFGSILASCSYDGKALIWKEQPETQQWSIIAEHTVHQASVNSVSWAPHELGA 189

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG------------DLIA 362
            ++  S  +GK  +     +G+    I            W+P                I 
Sbjct: 190 VLLCTSS-DGKVSVVDFNDDGTTSHVIFDAHAIGANSATWAPVSTSSKDSAALKQQRRIV 248

Query: 363 FTKFSGEKFAIGVMKKDGS----QERLLVEDSNLQAPTWSPSG---RSLIFSRKKDGDTG 415
            +  S     I       +    + +L      ++   WSPS      +  + +   D  
Sbjct: 249 -SCGSDNLAKIWKYDAANNTYVEEAKLEGHTDWVRDVAWSPSNLIRSYIATASQ---DRT 304

Query: 416 SKLYSIDLNGRNETLINTPAYASDPQW 442
             +++ D +G+ +  + T     D  W
Sbjct: 305 VLIWTQDRDGKWQKQLLTEEKFPDVCW 331


>gi|269125589|ref|YP_003298959.1| prolyl oligopeptidase [Thermomonospora curvata DSM 43183]
 gi|268310547|gb|ACY96921.1| Prolyl oligopeptidase [Thermomonospora curvata DSM 43183]
          Length = 703

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 26/115 (22%)

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQAPT-------W 397
            S   PVW  +G+   FT+ + ++    +     DG ++ L+  D     P+       W
Sbjct: 73  GSVGPPVW--RGERRFFTRRTADQEHAVLYTADPDGREQVLI--DPMQIDPSGVTTLDGW 128

Query: 398 SPS--GRSLIFSRKKDGDTGSKLYSID------LNGRNETLINTPAYASDPQWVG 444
           SP   GR L +     GD  S+LY +D      L G  E    TP       W+ 
Sbjct: 129 SPDREGRLLAYLLSHGGDEESRLYVMDVVTGEVLEGPIERTRYTPI-----AWLP 178



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 43/229 (18%), Positives = 73/229 (31%), Gaps = 26/229 (11%)

Query: 238 RVYLMDTRIDRAPKRIGNF-----RSMILAPRFSSNGKRALISVQKDEAM--DIYSVDLQ 290
           RVYL     D   + +  F     ++       S +G+   +S  +  A   D++  DL 
Sbjct: 208 RVYLHRVGTDPDTEDVLIFGEGMDKTNYYGVSVSRDGRWLTVSASQGTAPRTDVWLADLA 267

Query: 291 SNATE--RLTN---TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD----QKRI 341
           +++ +  RLT     +    S     D    +F      + +L V           ++ I
Sbjct: 268 ASSPQAPRLTPVQVGVDAQTSLHVGRDGRAYLFTDRDAPRGRLCVADPADPSHESWRELI 327

Query: 342 SQDKEASYFDPVWSPQGDLIAF-----TKFSGEKFAIGVMKKDGS---QERLLVEDSNLQ 393
            +D EA   D      G  +A               I V         ++  L    ++ 
Sbjct: 328 PEDPEAVLTDYAIL-DGPALARPLLLAGWTRHAVSEITVHDLATGKLIEQVPLPGLGSIG 386

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQ 441
           A    P G    +    D  T + +Y  D L GR       P     P+
Sbjct: 387 ALVERPEGGHEAWFVYTDNTTPTSVYRYDALTGRTALWAGAPGKVEVPE 435



 Score = 36.9 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 63/198 (31%), Gaps = 36/198 (18%)

Query: 258 SMILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFINISAS-----YS 310
             +  P +   G+R   + +    E   +Y+ D      + L + + I+ S       +S
Sbjct: 73  GSVGPPVWR--GERRFFTRRTADQEHAVLYTADPDGR-EQVLIDPMQIDPSGVTTLDGWS 129

Query: 311 PD--SSQIVFESDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWSPQ--GDLIAF- 363
           PD     + +     G E  +LYVM     +       +   Y    W P   G+  AF 
Sbjct: 130 PDREGRLLAYLLSHGGDEESRLYVMDVVTGEVLE-GPIERTRYTPIAWLPSRLGEPAAFY 188

Query: 364 ---------TKFSGEKFAIGVM------KKDGSQERLLVED---SNLQAPTWSPSGRSLI 405
                         E++   V         D     +  E    +N    + S  GR L 
Sbjct: 189 YVRRLPPGQVPEGEEQYHRRVYLHRVGTDPDTEDVLIFGEGMDKTNYYGVSVSRDGRWLT 248

Query: 406 FSRKKDGDTGSKLYSIDL 423
            S  +     + ++  DL
Sbjct: 249 VSASQGTAPRTDVWLADL 266


>gi|326489759|dbj|BAK01860.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 611

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 54/145 (37%), Gaps = 10/145 (6%)

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
             D   V L  +     T   +   S++ SPD ++      ++GK ++Y +  +   ++ 
Sbjct: 428 TTDSAIVLLNKSNVTSTTKVSYTITSSAISPDGTE-AIVGAQDGKLRIYSISGDTVTEEA 486

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTW 397
           + +          +SP   +  F      + A+    +   + ++   L   + +    W
Sbjct: 487 VLEKHRGPITTIHYSPD--VSMFASADSNREAVA-WDRATREVKVKNMLFHTARVNCLAW 543

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSID 422
           SP  R   F      DT + +Y +D
Sbjct: 544 SPDSR---FVATGSLDTCAIIYDVD 565



 Score = 43.1 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 73/232 (31%), Gaps = 68/232 (29%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           RFS NG+    S      + ++    D    A  R  +    ++   +SPD  +IV   D
Sbjct: 64  RFSPNGEWVA-SADASGCVRVWGRHGDRALKAEFRPISGRVDDL--RWSPDGMRIVVSGD 120

Query: 322 REGKEQLY---------VMQSNGSDQKRIS------------------------------ 342
            +GK  +          V   +G  ++ +S                              
Sbjct: 121 GKGKSLVRAFMWDSGSTVGDFDGHSKRVLSCDFKPTRPFRIVTCGEDFLANYYEGPPFKF 180

Query: 343 ----QDKEASYFDPVWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVEDS 390
               +D         ++P G          +           IG +  +GS         
Sbjct: 181 KHSIRDHTNFVNCIRYAPDGTKFITVSSDKKGLIYDGKTGDKIGELSSEGS------HTG 234

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI--DLNGR-NETLINTPAYASD 439
           ++ A +WSP  + ++       D  +K++ I  D +G  N TL+ T     D
Sbjct: 235 SIYAVSWSPDSKQVL---TVSADKTAKVWDINEDASGTLNRTLVCTGIGGVD 283



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 38/128 (29%), Gaps = 6/128 (4%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVF 318
           I +   S +G    I   +D  + IYS+   +      L        +  YSPD S    
Sbjct: 451 ITSSAISPDGTE-AIVGAQDGKLRIYSISGDTVTEEAVLEKHRGPITTIHYSPDVSMFA- 508

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEKFAIGVMK 377
               +   +         + K  +     +  +   WSP    +A            V K
Sbjct: 509 --SADSNREAVAWDRATREVKVKNMLFHTARVNCLAWSPDSRFVATGSLDTCAIIYDVDK 566

Query: 378 KDGSQERL 385
              S+  +
Sbjct: 567 PASSRSTI 574



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 40/103 (38%), Gaps = 5/103 (4%)

Query: 197 DRDGANIRYLTPSRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
             +G   ++    RD   F    R++P+  K    + D + ++       +I       G
Sbjct: 172 YYEGPPFKFKHSIRDHTNFVNCIRYAPDGTKFITVSSDKKGLIYDGKTGDKIGELSSE-G 230

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ-SNATER 296
           +    I A  +S + K+ L +V  D+   ++ ++   S    R
Sbjct: 231 SHTGSIYAVSWSPDSKQVL-TVSADKTAKVWDINEDASGTLNR 272



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 54/193 (27%), Gaps = 53/193 (27%)

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T   +    A +SP+   +   +D  G  +++    +    K   +       D  WSP 
Sbjct: 54  TEHAYPTTVARFSPNGEWVA-SADASGCVRVWGRHGD-RALKAEFRPISGRVDDLRWSPD 111

Query: 358 GDLIAFTKFSGEKFAIG---------VMKKDGSQERLLVEDSNLQAP------------- 395
           G  I  +     K  +          V   DG  +R+L  D     P             
Sbjct: 112 GMRIVVSGDGKGKSLVRAFMWDSGSTVGDFDGHSKRVLSCDFKPTRPFRIVTCGEDFLAN 171

Query: 396 -----------------------TWSPSGRSLIFSRK------KDGDTGSKLYSIDLNGR 426
                                   ++P G   I           DG TG K+  +   G 
Sbjct: 172 YYEGPPFKFKHSIRDHTNFVNCIRYAPDGTKFITVSSDKKGLIYDGKTGDKIGELSSEGS 231

Query: 427 NETLINTPAYASD 439
           +   I   +++ D
Sbjct: 232 HTGSIYAVSWSPD 244


>gi|320104053|ref|YP_004179644.1| WD40 repeat-containing protein [Isosphaera pallida ATCC 43644]
 gi|319751335|gb|ADV63095.1| WD40 repeat, subgroup [Isosphaera pallida ATCC 43644]
          Length = 1264

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/202 (12%), Positives = 63/202 (31%), Gaps = 21/202 (10%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINISASYSP 311
           +   R  + A  F+ +G+  + S        +   D        +         +  ++P
Sbjct: 154 VTPPREPVGAVAFTPDGQSIVASF----GNRLQRFDAAQGTPRGQPLELPGRITALGFTP 209

Query: 312 DSSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
             + +     R G +    ++       +  ++    +  D   +P G  +    +    
Sbjct: 210 KGNALWVAGGRPGLDGFVALVDPTAWTLRAQARGHADAILDAAATPDGHRLVTVSYDRLG 269

Query: 371 FAIGVMK--KDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKK------DGDTGSKL 418
           F   ++    + +   +L         + A   SP GR +            D  TG++L
Sbjct: 270 FVWSLIDDQNESTAPTILQTLKEHTDAVHAVAVSPDGRLIATGSADRSVKVWDAATGARL 329

Query: 419 YSIDLNGRNETLINTPAYASDP 440
            ++      +  +   A+  +P
Sbjct: 330 VTLSEATGPQLAV---AFGPEP 348



 Score = 36.5 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 36/281 (12%), Positives = 88/281 (31%), Gaps = 62/281 (22%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           F  +   +  +     +   + ++D     +R         + +   +P+  ++   +YD
Sbjct: 207 FTPKGNALWVAGGRPGLDGFVALVDPTAWTLRAQARGHADAILDAAATPDGHRLVTVSYD 266

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
               +   + D     AP  +   +     + A   S +G+    +   D ++ ++  D 
Sbjct: 267 RLGFVWSLIDDQNESTAPTILQTLKEHTDAVHAVAVSPDGRLIA-TGSADRSVKVW--DA 323

Query: 290 QSNA-TERLTNTLFINISASYSP----------DSSQIVFE----SDRE----------- 323
            + A    L+      ++ ++ P          D +  V+      DR+           
Sbjct: 324 ATGARLVTLSEATGPQLAVAFGPEPNRLTAAGADRALRVWTLRTNWDRQPPTATAELVQT 383

Query: 324 ---------------------GKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                                G ++   L++++ +G +      D+         +P GD
Sbjct: 384 RLAHRDAVQRLLRWNDRLASVGADRALKLWILERDGWNPTASCADQSDWPRSLAIAPDGD 443

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            +A  +  G    + +     +   LL       AP  SP+
Sbjct: 444 RLALGRLDGT---LDLFNP-TNATVLLALTPQTPAP--SPN 478


>gi|296086665|emb|CBI32300.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 56/164 (34%), Gaps = 21/164 (12%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDR 322
           FS++G    ++  +   + IY+VD      + +   +  +     S SPD   +V+ S  
Sbjct: 10  FSADG-SLFVAGFQGSHIRIYNVDRGWKVQKNILAKSLRWTVTDTSLSPDQRHLVYASMS 68

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPV-------------WSPQGDLIAFTKFSGE 369
                + +  +       I++  +   F                +S  G  +        
Sbjct: 69  PIVHIVNIGSAATESLANITEIHDGLDFSAADDEGYSFGIFSVKFSTDGRELVAGSSDDS 128

Query: 370 KFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
              I V   + ++   R+L   S++    ++     LI+S   D
Sbjct: 129 ---IYVYDLEANKLSLRILAHTSDVNTVCFADESGHLIYSGSDD 169


>gi|302559454|ref|ZP_07311796.1| peptide hydrolase [Streptomyces griseoflavus Tu4000]
 gi|302477072|gb|EFL40165.1| peptide hydrolase [Streptomyces griseoflavus Tu4000]
          Length = 604

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 67/232 (28%), Gaps = 19/232 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS----RDQILFEPRFSP-NQQKVAY 228
           +  ++ V  +     + ++L V+  DG  +  L  +    R+  L    F+P        
Sbjct: 169 DGALIAVEHTEHGDAMHSALRVLRPDGTTVAELDDTDGGTRELGLEVLGFAPVEGDTRLL 228

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +         + D           +    + A  +  +G   LI    +   +I+  D
Sbjct: 229 IGHQRRGRWEPLVWDVATGEETDLALDLPGDVSA-EWYPDGSGLLIVHGFEARGEIFRYD 287

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           L     E++         A+  PD S     S            +      R +      
Sbjct: 288 LAEGRLEKVPTPPGAVSGATVRPDGSVEYLWS-----------SAAVPPAVRSTAGGVVL 336

Query: 349 YFDPVWSPQGDLI--AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
               + SP    +   + +  G +    V K  G+   L         PTW 
Sbjct: 337 EPPGMKSPGSVPVEDVWVEGPGGRIHALVQKPAGATGPLPTVFDIHGGPTWH 388



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 27/189 (14%), Positives = 63/189 (33%), Gaps = 11/189 (5%)

Query: 260 ILAPRFS---SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +  P ++    +  R+L         ++Y+ D  +    ++T+          SPD   I
Sbjct: 24  VSLPDWAEDAPD--RSLFVSNATGTYELYAWDRSTGDRRQVTDRANGTTDGVLSPDGEWI 81

Query: 317 VFESDREGKE-QLY-VMQSNGSDQKRISQDKEASYFDP-VWSPQGD-LIAFTKFSGEKFA 372
            +  D++G E  ++   + +G + +  +   + SY         G   +       +   
Sbjct: 82  WWFDDKDGDEFGVWRRQRFSGGEDELAAPGLDPSYPAGLALGRDGRTAVVGRSTDEDGTT 141

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT-GSKLYSIDLNGRN-ETL 430
           I +++       +     +      S  G  +     + GD   S L  +  +G     L
Sbjct: 142 IHLVRTGEGPAEIYRHRESAGVGDLSHDGALIAVEHTEHGDAMHSALRVLRPDGTTVAEL 201

Query: 431 INTPAYASD 439
            +T     +
Sbjct: 202 DDTDGGTRE 210



 Score = 43.9 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 36/258 (13%), Positives = 76/258 (29%), Gaps = 20/258 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +    R   +  P ++ +    +    +      +Y  D R     +++ +  +    
Sbjct: 13  PDWEKRFRAPRVSLPDWAEDAPDRSLFVSNATGTYELYAWD-RSTGDRRQVTDRANGTTD 71

Query: 263 PRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVF 318
              S +G+       KD     ++     S   + L             +   D    V 
Sbjct: 72  GVLSPDGEWIWWFDDKDGDEFGVWRRQRFSGGEDELAAPGLDPSYPAGLALGRDGRTAVV 131

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGV 375
               +       +   G     I + +E S      S  G LIA            A+ V
Sbjct: 132 GRSTDEDGTTIHLVRTGEGPAEIYRHRE-SAGVGDLSHDGALIAVEHTEHGDAMHSALRV 190

Query: 376 MKKDGSQERLL--VEDSN----LQAPTWSP---SGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           ++ DG+    L   +       L+   ++P     R LI   ++ G     ++ +     
Sbjct: 191 LRPDGTTVAELDDTDGGTRELGLEVLGFAPVEGDTRLLI-GHQRRGRWEPLVWDVATGEE 249

Query: 427 NETLINTPAYASDPQWVG 444
            +  ++ P   S  +W  
Sbjct: 250 TDLALDLPGDVSA-EWYP 266


>gi|227496408|ref|ZP_03926696.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
 gi|226834060|gb|EEH66443.1| conserved hypothetical protein [Actinomyces urogenitalis DSM 15434]
          Length = 78

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 10/71 (14%)

Query: 306 SASYSPDSSQIVFESDREGKE--------QLYVMQSNGSDQKRI--SQDKEASYFDPVWS 355
           S + SPD SQ+V+ S   G          +L++++  G   + +      + +     WS
Sbjct: 5   SPNPSPDGSQLVYLSYPSGTVSHPADLPVELWLLEVQGGRPRTLVRLFGGQGTMNVNSWS 64

Query: 356 PQGDLIAFTKF 366
           P G   AF  +
Sbjct: 65  PDGTRFAFVAY 75



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 12/74 (16%)

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKF--------AIGVMKKDGSQERLLVE----DSNLQAP 395
           S   P  SP G  + +  +              + +++  G + R LV        +   
Sbjct: 2   STGSPNPSPDGSQLVYLSYPSGTVSHPADLPVELWLLEVQGGRPRTLVRLFGGQGTMNVN 61

Query: 396 TWSPSGRSLIFSRK 409
           +WSP G    F   
Sbjct: 62  SWSPDGTRFAFVAY 75



 Score = 40.0 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 11/73 (15%), Positives = 26/73 (35%), Gaps = 11/73 (15%)

Query: 259 MILAPRFSSNGKRALISVQKDEAM--------DIYSVDLQSNATE---RLTNTLFINISA 307
              +P  S +G + +        +        +++ +++Q        RL          
Sbjct: 2   STGSPNPSPDGSQLVYLSYPSGTVSHPADLPVELWLLEVQGGRPRTLVRLFGGQGTMNVN 61

Query: 308 SYSPDSSQIVFES 320
           S+SPD ++  F +
Sbjct: 62  SWSPDGTRFAFVA 74


>gi|241955455|ref|XP_002420448.1| WD-40 repeat domain-containing protein, putative; mRNA export
           protein, putative [Candida dubliniensis CD36]
 gi|223643790|emb|CAX41526.1| WD-40 repeat domain-containing protein, putative [Candida
           dubliniensis CD36]
          Length = 338

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 59/187 (31%), Gaps = 15/187 (8%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD---G 200
           FF+  A++ K+ H    D  + I   K   +    F+  S    I+   +   D D    
Sbjct: 144 FFNVGANY-KLIHQFKLD--EHIYDLKWFNHDHQFFLVSSHDGSILLYEIIDGDEDNELS 200

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           + +R      +  +     SP      Y T    + +  +          K I +    I
Sbjct: 201 SKLRASVSGHNSSITTIAISPKGN---YFTVGSSEGVISFWKTLENLINSKVITDVDQSI 257

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN---ISASYSPDSSQI 316
                S +G    ++   D    IY    +       + N+   N    S ++ P  +  
Sbjct: 258 AQLDISRDGTYLAVAYDTDSNSRIYE--AEGGEMVHEIPNSSSGNQTFSSITWFPTKTGF 315

Query: 317 VFESDRE 323
            + SD  
Sbjct: 316 AYTSDHG 322


>gi|198432947|ref|XP_002127877.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 474

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 42/316 (13%), Positives = 86/316 (27%), Gaps = 43/316 (13%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++   F  +  S+R + H   D I        G            V S     ++ +   
Sbjct: 42  LMVWNFKPNMRSYRFVGHK--DAILSVQFSPSG----------HLVASASRDKTVRLWIP 89

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
                  +  +    +    FS +   +  A  D      + +      +    +    +
Sbjct: 90  SVKGESTVFKAHTATVRSVNFSSDGLHLLTAADDK----TIKVWSVHRQKFQFSLTQHMN 145

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIV 317
            +   RFS +  R ++S   D+ + ++  D  S                  + P  + I 
Sbjct: 146 WVRCARFSPD-NRLIVSGSDDKTVKLW--DRNSKECVHTYFQHGGFVNHVEFHPSGTCIA 202

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     + V     +   +  Q          + P G+ +  +        + +M 
Sbjct: 203 AA---GTDSTVKVWDIRTNKLLQHYQVHSGPVNQLSFHPSGNFLITSSNDCT---LKIMD 256

Query: 378 KDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSI-----DLNGRNE 428
               + RL       Q P    T+S +G    +      D    ++       DL  R  
Sbjct: 257 L--LEGRLFFTLHGHQEPVTATTFSRNGE---YFASGGADEQVIVWKTNFDKSDLTERPL 311

Query: 429 TLINT---PAYASDPQ 441
           T       P    +P 
Sbjct: 312 TQTTHEAKPTGLREPT 327


>gi|4884326|emb|CAB43276.1| hypothetical protein [Homo sapiens]
          Length = 549

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/215 (13%), Positives = 64/215 (29%), Gaps = 36/215 (16%)

Query: 108 AQVLVTGRVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA-------- 155
           A  +V  +    G       +  + R+WD   ++ ++  ++       + IA        
Sbjct: 1   AHQVVVAKYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRI 60

Query: 156 -------HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD--------- 199
                                 G+       ++   +       L     D         
Sbjct: 61  AVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGP 120

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-- 257
               ++      + +   RFSP+  + A A+ D     ++Y+ D +       +G  +  
Sbjct: 121 PFKFKFTVGDHSRFVNCVRFSPDGNRFATASADG----QIYIYDGKTGEKVCALGGSKAH 176

Query: 258 -SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
              I A  +S +    L S   D+   I+ V + S
Sbjct: 177 DGGIYAISWSPDSTHLL-SASGDKTSKIWDVSVNS 210


>gi|125980175|ref|XP_001354118.1| GA20480 [Drosophila pseudoobscura pseudoobscura]
 gi|54641106|gb|EAL29857.1| GA20480 [Drosophila pseudoobscura pseudoobscura]
          Length = 634

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 59/144 (40%), Gaps = 11/144 (7%)

Query: 199 DGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI-GN 255
           DG  ++ +         ++  +FSP+  K+A  + D   I+          +  + + G 
Sbjct: 304 DGFPMQTIQILTDHCDEVWFCKFSPDGLKLATGSKDSTVIIWDVDPYKLTLKHRRVLDGQ 363

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPD 312
            +  +    +S + K  L+   +D + ++Y  +++      +  +  +  S    ++S D
Sbjct: 364 AQLSVSFVSWSPDSKLILVGGTED-SHELYIWNVEDGKLF-VKFSQSLEDSLACGAFSRD 421

Query: 313 SSQIVFESDREGKEQLYVMQSNGS 336
            ++ V       K QLY+   NG+
Sbjct: 422 GTRFVCG---GQKGQLYLCDLNGT 442



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 61/146 (41%), Gaps = 11/146 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLF-INISA-SYSPDSSQIVFES 320
           FS +G +   +  KD  + I+ VD    +    R+ +    +++S  S+SPDS +++   
Sbjct: 326 FSPDGLKLA-TGSKDSTVIIWDVDPYKLTLKHRRVLDGQAQLSVSFVSWSPDS-KLILVG 383

Query: 321 DREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             E   +LY+    +G    + SQ  E S     +S  G         G+K  + +   +
Sbjct: 384 GTEDSHELYIWNVEDGKLFVKFSQSLEDSLACGAFSRDGTRFV---CGGQKGQLYLCDLN 440

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSLI 405
           G+      E   + +  +    ++++
Sbjct: 441 GTIVDSW-EGVRVNSIAFRADNKTIL 465


>gi|71024559|ref|XP_762509.1| hypothetical protein UM06362.1 [Ustilago maydis 521]
 gi|46101986|gb|EAK87219.1| hypothetical protein UM06362.1 [Ustilago maydis 521]
          Length = 446

 Score = 45.0 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 64/204 (31%), Gaps = 13/204 (6%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLT 298
           ++ +T+      R+G     + +  F++ G     +   D  + I+          E LT
Sbjct: 109 WIWNTQDGSEVARLGGHNDSVTSALFNAAGD-LAATGGMDGKVRIWRKRGQDFRTWEFLT 167

Query: 299 NTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           N    +  +   + P  S +V          +++ Q    +  ++      +     ++P
Sbjct: 168 NLEGPDEVVWIDWHPKGSVLVAG---GADSTVWMWQLPSGNVMKVFSGHSDAVSCGSFTP 224

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQE---RLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            G  +      G    + +     ++         D  L     SP  + ++        
Sbjct: 225 DGKRLITGSEDGT---LIIWDPKTAEVVSKVQTHLDGGLTQLAVSPDAKVVVIGGAAGDV 281

Query: 414 TGSKLYSIDLNGRNETLINTPAYA 437
               + ++D  G    + +   +A
Sbjct: 282 RVINIGALDNGGAASVVASLTGHA 305


>gi|329934329|ref|ZP_08284408.1| WD-40 repeat protein [Streptomyces griseoaurantiacus M045]
 gi|329305925|gb|EGG49780.1| WD-40 repeat protein [Streptomyces griseoaurantiacus M045]
          Length = 898

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/122 (13%), Positives = 38/122 (31%), Gaps = 4/122 (3%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L+ T+      R+      +    FS  G+    +   D  + ++      +    LT  
Sbjct: 659 LLSTQSGAFAGRLSGHTGAVNGVAFSPGGRLLA-TAGADSTVRLWGGPGLRSPVATLTGY 717

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               +S +++PD   +       G   + + +        +      +     +SP G  
Sbjct: 718 GAPLLSVAFAPDGRTLAAA---GGDGTVRLWRLPERRAAGVLYGHAGAVRSVAFSPDGGT 774

Query: 361 IA 362
           + 
Sbjct: 775 LV 776


>gi|302829386|ref|XP_002946260.1| hypothetical protein VOLCADRAFT_115828 [Volvox carteri f.
           nagariensis]
 gi|300269075|gb|EFJ53255.1| hypothetical protein VOLCADRAFT_115828 [Volvox carteri f.
           nagariensis]
          Length = 1305

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 72/189 (38%), Gaps = 13/189 (6%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDTRID 247
            + ++ V   DGA +        + +F+ RF P +   +A A++D      V + D R  
Sbjct: 257 QRTAVLVSFSDGAVLWRQEGGHTETVFDCRFCPTDPNLLATASFDS----TVRVWDVRSS 312

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFINIS 306
           R  K +     ++ +  +S++G+    S   +++  I+  D  + +  + L      ++ 
Sbjct: 313 RCVKHLLGAEGILYSVSWSADGRHIAAS---NDSGAIFLYDYGRGSLAKTLRQHTKQSLK 369

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--FT 364
            ++ P    ++  +  +G   + V   +G      +          V  P  D +     
Sbjct: 370 VAFHPHKPSLLASASTDGT--VLVYNIDGETLLVGTSGGGELLLWDVSRPHHDCLVRTLV 427

Query: 365 KFSGEKFAI 373
             +G  F +
Sbjct: 428 GHNGRSFNV 436



 Score = 40.0 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 27/216 (12%), Positives = 61/216 (28%), Gaps = 28/216 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +    +++ V D   +         + IL+   +S + + +A       D   ++L D  
Sbjct: 297 TASFDSTVRVWDVRSSRCVKHLLGAEGILYSVSWSADGRHIA----ASNDSGAIFLYDYG 352

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-------LQSNAT---- 294
                K +       L   F  +    L S   D  + +Y++D                 
Sbjct: 353 RGSLAKTLRQHTKQSLKVAFHPHKPSLLASASTDGTVLVYNIDGETLLVGTSGGGELLLW 412

Query: 295 -----------ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                        L      + +  +SP     +  S  +   +++    +  +   +  
Sbjct: 413 DVSRPHHDCLVRTLVGHNGRSFNVEFSPLLRNYLLSSSNDRTSRVW--DVSSGECLAVLS 470

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
              A      W P+   I FT        +  ++  
Sbjct: 471 GHTAVVRAVAWHPEVAHICFTGSWDASVRVWDIRTG 506


>gi|256393881|ref|YP_003115445.1| 40-residue YVTN family beta-propeller repeat protein [Catenulispora
           acidiphila DSM 44928]
 gi|256360107|gb|ACU73604.1| 40-residue YVTN family beta-propeller repeat protein [Catenulispora
           acidiphila DSM 44928]
          Length = 457

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 59/201 (29%), Gaps = 12/201 (5%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +  +V         +  +             I   R    A   S +G R  +    D
Sbjct: 96  SADGHRVYVTDSGSSSVSVIDTQAASGPAVVASIAVGRQPQSA-ALSPDGTRLYVG--DD 152

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            A  +  +D  S      +         A  SPD S+ V+ +D  G     +  +  +  
Sbjct: 153 IAGTVSVIDTASDTVLSTIAAGPGAEGLAV-SPDGSR-VYAADTGGSSVTVIDAATDTVV 210

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTW 397
              +     +      SP G  +    +   +  + V+          V   +N  +   
Sbjct: 211 T--TVPVGQTPVGLTVSPDGSHVYVPDYGSGQ--VSVIDTATETVSATVAVGANPHSAAV 266

Query: 398 SPSGRSLIFSRKKDGDTGSKL 418
           SP G ++ +       T S +
Sbjct: 267 SPDGATV-YVTDAGSGTVSVI 286



 Score = 36.5 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 45/156 (28%), Gaps = 20/156 (12%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  +V YA       + V    T        +G      +    S +G    +   
Sbjct: 181 AVSPDGSRV-YAADTGGSSVTVIDAATDTVVTTVPVGQTP---VGLTVSPDGSHVYV--P 234

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              +  +  +D  +              SA+ SPD +             +YV  +    
Sbjct: 235 DYGSGQVSVIDTATETVSATVAVGANPHSAAVSPDGAT------------VYVTDAGSGT 282

Query: 338 QKRISQDKEA--SYFDPVWSPQGDLIAFTKFSGEKF 371
              IS   E   S F    +P G  +A     G  +
Sbjct: 283 VSVISTATETLSSTFSVGVAPHGIALAVAPTGGSAY 318


>gi|225685198|gb|EEH23482.1| eukaryotic translation initiation factor 2A [Paracoccidioides
           brasiliensis Pb03]
          Length = 741

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 17/165 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++  S   + +L ++   G     +   ++  + +  +SPN ++          ++  
Sbjct: 247 VDKTGKSYYGETTLYLLSASGGFDSRIDLDKEGPIHDVTWSPNSKEF--------GVVYG 298

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           Y+         + +    S  LAPR    FS NG+  +++   + A  +   DL      
Sbjct: 299 YMPAKTTIFNTRAVATH-SFALAPRNTIIFSPNGRFVIVAGFGNLAGQMDIYDLH-KDYH 356

Query: 296 RLTNTLFINIS-ASYSPDSSQI--VFESDREGKEQLYVMQSNGSD 337
           ++T     N S   +SPD   I     S R   +    +   G  
Sbjct: 357 KVTTIEASNASVCEWSPDEKFILTATTSPRLRVDNGVRIWHVGGG 401



 Score = 40.8 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 17/128 (13%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-- 381
           G+  LY++ ++G    RI  DKE    D  WSP                 G M    +  
Sbjct: 256 GETTLYLLSASGGFDSRIDLDKEGPIHDVTWSPNSKEFGVV--------YGYMPAKTTIF 307

Query: 382 QERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTPAY 436
             R +   S   AP     +SP+GR +I +   +      +Y +  +    T I  + A 
Sbjct: 308 NTRAVATHSFALAPRNTIIFSPNGRFVIVAGFGNLAGQMDIYDLHKDYHKVTTIEASNAS 367

Query: 437 ASDPQWVG 444
             +  W  
Sbjct: 368 VCE--WSP 373



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 34/241 (14%), Positives = 80/241 (33%), Gaps = 25/241 (10%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQK--VAYATYDDEDILRVYLMDTRIDRAPKRIGNF- 256
           G   +     R + + +   SP +      +          V + +     +P    NF 
Sbjct: 164 GQLGKVWNKLRVEGVVDFALSPGRSNSIAVFIPERKGMPASVKVFNVPQFNSPVSQKNFF 223

Query: 257 RSMILAPRFSSNGKRALISVQKD---------EAMDIYSVDLQSNATERL-TNTLFINIS 306
           +   +  ++++ G   ++  Q D             +Y +        R+  +       
Sbjct: 224 KGDKVQLKWNNTGTSVIVLAQTDVDKTGKSYYGETTLYLLSASGGFDSRIDLDKEGPIHD 283

Query: 307 ASYSPDSSQI-VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
            ++SP+S +  V       K  ++  ++  +    +     A     ++SP G  +    
Sbjct: 284 VTWSPNSKEFGVVYGYMPAKTTIFNTRAVATHSFAL-----APRNTIIFSPNGRFVIVAG 338

Query: 366 FSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYS 420
           F     +  I  + KD  +    +E SN     WSP  + ++ +        D G +++ 
Sbjct: 339 FGNLAGQMDIYDLHKDYHKVT-TIEASNASVCEWSPDEKFILTATTSPRLRVDNGVRIWH 397

Query: 421 I 421
           +
Sbjct: 398 V 398


>gi|218262635|ref|ZP_03477017.1| hypothetical protein PRABACTJOHN_02696 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223264|gb|EEC95914.1| hypothetical protein PRABACTJOHN_02696 [Parabacteroides johnsonii
           DSM 18315]
          Length = 663

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 35/207 (16%), Positives = 63/207 (30%), Gaps = 33/207 (15%)

Query: 160 DDIYQSITG-EKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-------SRD 211
           D +Y + T   KG    +    + S ++G   N   ++ +D  N  +  P       + +
Sbjct: 176 DQLYFASTRTPKGAGKDKEE--TNSAITGQRNNDFFLVKQD-ENGAWQAPVELEDEVNTE 232

Query: 212 QILFEPRFSPNQQK--VAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILA--- 262
                P FS +       Y   D E      + +    +       R    +  + A   
Sbjct: 233 FDEGTPSFSKDGNTMYYTYCAQDPEGPRTSEIYISSRSSAKWGKGTRANIVKDSVTALGH 292

Query: 263 PRFSSNGKRALISVQ---KDEAMDIYSVDLQS---NATERL---TNTLFINISASYSPDS 313
           P  S +GK               D++   +        E L    NT    +   Y  DS
Sbjct: 293 PSISPDGKYLYFVSDAVGGYGGKDLFRARVVGSDFGPMENLGPDINTPGDEMFP-YVRDS 351

Query: 314 SQIVFESDRE---GKEQLYVMQSNGSD 337
             + F SD     G   ++    + + 
Sbjct: 352 VTLYFASDGHPGMGGLDIFKATLDSTG 378



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 24/148 (16%)

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASY----FDPVWSPQGDLIAFTK-----FS 367
                R     L     NG+ Q  +  + E +       P +S  G+ + +T        
Sbjct: 199 AITGQRNNDFFLVKQDENGAWQAPVELEDEVNTEFDEGTPSFSKDGNTMYYTYCAQDPEG 258

Query: 368 GEKFAIGVMKKD------GSQERLLVED-SNLQAPTWSPSGRSLIFSRK-KDGDTGSKLY 419
                I +  +       G++  ++ +  + L  P+ SP G+ L F      G  G  L+
Sbjct: 259 PRTSEIYISSRSSAKWGKGTRANIVKDSVTALGHPSISPDGKYLYFVSDAVGGYGGKDLF 318

Query: 420 SIDLNGRN----ETL---INTPAYASDP 440
              + G +    E L   INTP     P
Sbjct: 319 RARVVGSDFGPMENLGPDINTPGDEMFP 346



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 39/234 (16%), Positives = 71/234 (30%), Gaps = 42/234 (17%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL---APRFSSNGKRALISV-----QK 278
           A     + D   V   +    +AP  + +  +       P FS +G     +      + 
Sbjct: 199 AITGQRNNDFFLVKQDENGAWQAPVELEDEVNTEFDEGTPSFSKDGNTMYYTYCAQDPEG 258

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINIS------ASYSPDSSQIVFESDREGKEQ---LY 329
               +IY     S    + T    +  S       S SPD   + F SD  G      L+
Sbjct: 259 PRTSEIYISSRSSAKWGKGTRANIVKDSVTALGHPSISPDGKYLYFVSDAVGGYGGKDLF 318

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------------EKFAIGVMK 377
             +  GSD          +    + +P  ++  + + S                 I    
Sbjct: 319 RARVVGSD-----FGPMENLGPDINTPGDEMFPYVRDSVTLYFASDGHPGMGGLDIFKAT 373

Query: 378 KDGSQERL-------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-LYSIDL 423
            D + +         +    +    T++ +  S  FS  ++   G   LYS +L
Sbjct: 374 LDSTGKWNVENMKAPINSAGDDFGITFAGNKESGFFSSNRNDARGYDHLYSFEL 427


>gi|170102797|ref|XP_001882614.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642511|gb|EDR06767.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1297

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 8/107 (7%)

Query: 219 FSPNQQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           F+P   K++            +++   +   ++   R+    S + +  FS +G+  + S
Sbjct: 792 FAPQSSKISLHFLKLFQKTLTVKIGQREHWSEKCFLRLVGHDSWVTSVAFSPDGRHIV-S 850

Query: 276 VQKDEAMDIYSVDLQSNATE--RLTNTLFINISASYSPDSSQIVFES 320
              D+ + ++  D Q+  +    L        S ++SPD   IV  S
Sbjct: 851 GSHDKTVRVW--DAQTGQSVMDPLKGHDDWVTSVAFSPDGRHIVSGS 895



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 4/77 (5%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
             D  +    FSP+ + +   ++D    +RV+   T         G     + +  FS +
Sbjct: 831 GHDSWVTSVAFSPDGRHIVSGSHD--KTVRVWDAQTGQSVMDPLKG-HDDWVTSVAFSPD 887

Query: 269 GKRALISVQKDEAMDIY 285
           G+  + S   D+ + ++
Sbjct: 888 GRHIV-SGSGDKTVRVW 903



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 9/79 (11%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLVEDSNLQAPTWSPS 400
             ++      +SP G  I           + V      Q     L   D  + +  +SP 
Sbjct: 831 GHDSWVTSVAFSPDGRHIVSGSHDKT---VRVWDAQTGQSVMDPLKGHDDWVTSVAFSPD 887

Query: 401 GRSLIFSRKKDGDTGSKLY 419
           GR ++      GD   +++
Sbjct: 888 GRHIV---SGSGDKTVRVW 903


>gi|156402636|ref|XP_001639696.1| predicted protein [Nematostella vectensis]
 gi|156226826|gb|EDO47633.1| predicted protein [Nematostella vectensis]
          Length = 1217

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 62/176 (35%), Gaps = 16/176 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FS +  KV     D+     V + D++  R    I     ++    FS +  R  IS  
Sbjct: 614 KFSSDSSKVVSCGTDN----HVKVWDSQSGRQLLSISGHGDVVNCCAFSHDDSRI-ISCS 668

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFES-DREGKEQLYVMQSNG 335
            D+ + I+  D  S             + S S+SPD ++ V  S DR     + V  S  
Sbjct: 669 ADQTVKIW--DASSGEGVLCFVGHTQEVFSCSFSPDDTKAVSCSADRT----VKVWDSKT 722

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                +            +SP G  +A          + + +    ++  L++D  
Sbjct: 723 GVCYHVYMAHTDIVRWCCFSPDGGKVASCSDDNT---VRIWEASSGEDLCLLDDHT 775



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 42/285 (14%), Positives = 91/285 (31%), Gaps = 36/285 (12%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHT-------ISDDIYQSIT 167
           +V+  G D      ++WD +  +Q++         +    +H         +D   +   
Sbjct: 621 KVVSCGTDN---HVKVWDSQSGRQLLSISGHGDVVNCCAFSHDDSRIISCSADQTVKIWD 677

Query: 168 GEKG------------DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
              G             F+          VS     ++ V D       ++  +   I+ 
Sbjct: 678 ASSGEGVLCFVGHTQEVFSCSFSPDDTKAVSCSADRTVKVWDSKTGVCYHVYMAHTDIVR 737

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
              FSP+  KVA  + D  + +R++   +  D     + +  S +    F + G+  +  
Sbjct: 738 WCCFSPDGGKVASCSDD--NTVRIWEASSGEDLC--LLDDHTSSVSFCCFMNQGESVVTV 793

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE-SDREGKEQLYVMQSN 334
                 +   S    S     + N+    +S ++SPD S +    SD      + +  S 
Sbjct: 794 CSNCIKVWSCS----SGEQTWVYNSSSTCLSLAFSPDDSIVAMGFSD----TTVQLWNSK 845

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
              +  + +  +        S     +  +    E   I  + +D
Sbjct: 846 TFARLGVYKGHKGWAHSVGISKDSSKLV-SGSEDETVKIWTIDRD 889


>gi|115901602|ref|XP_796156.2| PREDICTED: similar to Apaf-1 [Strongylocentrotus purpuratus]
 gi|115939331|ref|XP_001183185.1| PREDICTED: similar to Apaf-1 [Strongylocentrotus purpuratus]
          Length = 1963

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 68/191 (35%), Gaps = 18/191 (9%)

Query: 199  DGANIRYLTPSRDQ---ILFEPRF------SPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
            DG    + + S  Q   I     +      SP+ Q +   +  +  + R+   +      
Sbjct: 1286 DGYVKFWSSESGKQAFSIEAHNNWVNWCEISPDGQTMVTCSSSNVKLWRI--PNGGYPLH 1343

Query: 250  PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
               I       L   FS +G +  +    D  ++I  +DL  +  + +  +  +  +  Y
Sbjct: 1344 QAMIRKIPGDWLRAIFSHDGTKIAMC-SLDGLIEI--LDLTEDRRKMIRASDSVIRALCY 1400

Query: 310  SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            + D   I+  SD + K +++   S  SD          S  +   SP G  +A T   G 
Sbjct: 1401 TLDDRYIISCSD-DTKVKVFDASSAMSDPVMSYTGHTTSVINASPSPDGQYVATT--GGS 1457

Query: 370  KFAIGVMKKDG 380
               +  +  DG
Sbjct: 1458 DVHVWTI-VDG 1467



 Score = 40.8 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 55/154 (35%), Gaps = 9/154 (5%)

Query: 254  GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
                 + +  +F++ G   L S  +D  +  +S +        +            SPD 
Sbjct: 1262 TPHSGVTMCAQFNAAGDHVL-SCGEDGYVKFWSSE-SGKQAFSIEAHNNWVNWCEISPDG 1319

Query: 314  SQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +V  S      +L+ + + G    + + +     +   ++S  G  IA     G    
Sbjct: 1320 QTMVTCS--SSNVKLWRIPNGGYPLHQAMIRKIPGDWLRAIFSHDGTKIAMCSLDG---L 1374

Query: 373  IGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLI 405
            I ++     + + +   DS ++A  ++   R +I
Sbjct: 1375 IEILDLTEDRRKMIRASDSVIRALCYTLDDRYII 1408


>gi|86159118|ref|YP_465903.1| hypothetical protein Adeh_2696 [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85775629|gb|ABC82466.1| hypothetical protein Adeh_2696 [Anaeromyxobacter dehalogenans
           2CP-C]
          Length = 529

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 36/232 (15%), Positives = 75/232 (32%), Gaps = 31/232 (13%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V+  DG   R    S D  L            AY   D      ++L   R     K 
Sbjct: 219 LSVVGADGRARRVAERSGDYALAP------GGAYAYTVQD-GGGYALHLAGPRQAVLGKD 271

Query: 253 IGNFRSMILAPRFSSNGKRALI--SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +  F        FS +G+           +  D++ V         L   +       ++
Sbjct: 272 VQAF-------AFSRDGRALAFLADATPGKQGDLHLVLAAKPGDAVLARDVG---ELRWA 321

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-KFSGE 369
             + ++ +    + + +     + G D    +    A+  D   S  G  +AF    +  
Sbjct: 322 QRAPRLAWLERFDARVRSGTAGAGGLDLPSRTYG--ANVTDLELSADGKRLAFLQHTTRG 379

Query: 370 KFAIGVMKKD-----GSQERLLVEDSNLQAPTWSPSGRSLIFSRK--KDGDT 414
            +++ +M        G+    + + +     ++SP  R L +  +  ++G+ 
Sbjct: 380 GYSVDLMLAQLDAPPGTAAVQVAQGAF--GFSFSPDARWLYYRTRCVRNGEG 429



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 40/236 (16%), Positives = 77/236 (32%), Gaps = 23/236 (9%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              L ++   G   R +  +   +     +SP    +A     D    R  L+  R   A
Sbjct: 85  SCDLRLVPSAGGEARRVAGAVTTLPHGLLWSPAGATLAALGDYDYPTARGTLVVARAGGA 144

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISAS 308
           P+ +G     +    F+   +  L     D  +    V       E +       ++ A 
Sbjct: 145 PRTLGT---AVSFAGFAPGTEDLLFVA--DGRL---LVSRGGGEPEPVAGLDRVGSLEAG 196

Query: 309 YSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
                        R+G      L V+ ++G  ++   +  +        +P G   A+T 
Sbjct: 197 PGWGGGDGPALLVRQGASAGAALSVVGADGRARRVAERSGDY-----ALAPGGAY-AYTV 250

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             G  +A+ +     +  R  V   ++QA  +S  GR+L F           L+ +
Sbjct: 251 QDGGGYALHL-----AGPRQAVLGKDVQAFAFSRDGRALAFLADATPGKQGDLHLV 301



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 53/169 (31%), Gaps = 15/169 (8%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALI---S 275
           S + +++A+  +       V LM  ++D  P               FS + +        
Sbjct: 364 SADGKRLAFLQHTTRGGYSVDLMLAQLDAPPGTAAVQVAQGAFGFSFSPDARWLYYRTRC 423

Query: 276 VQKDEAMDIYSVDLQ----SNATERLTNT-LFINISASYSPDSSQIVFESDREGKEQLYV 330
           V+  E  D+  V  +        ER+ +             D  +++    R  ++ L V
Sbjct: 424 VRNGEGCDVERVPAEGLAAGAKPERVVDGAKSFEYDPR---DPGRLLVTWQRMDRDALDV 480

Query: 331 -MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +  +G   +  +     S       P    +A+     ++    V + 
Sbjct: 481 GVWKDGKLTRVDTYVLPGS--AQFLGPDSRRLAYAVLHEKRQGAYVAEL 527


>gi|72004706|ref|XP_784892.1| PREDICTED: similar to UTP18 protein [Strongylocentrotus purpuratus]
 gi|115936398|ref|XP_001180509.1| PREDICTED: similar to UTP18 protein [Strongylocentrotus purpuratus]
          Length = 453

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 73/209 (34%), Gaps = 29/209 (13%)

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNF------RSMILAPRFSSNGKRALISVQKDEAMDIY 285
              D L    M   ++   KR+ N         M+ A  F   G +  +    D+ ++++
Sbjct: 120 RTGDYLTTSEMLPSVNLNIKRLTNLNKEQPTEGMVTALEFHP-GAQVAMVAGLDQRLNLF 178

Query: 286 SVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            V  +     ++  ++F+         ++   +++V    R   +  Y+         +I
Sbjct: 179 QV--EGRHNPKI-QSVFVEQFPIHCAHFASQGTEVVLSGKR---KFFYIYDMIAGKVSQI 232

Query: 342 SQDK---EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTW 397
              +   E        SP G  +AF    G+   I ++     +    L  +  + A T+
Sbjct: 233 PYIRGIQENKLMSFEVSPDGKFLAFL---GDYGNIHLLSAQTKELITTLKMNGTVDAVTF 289

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           +P G  ++            +Y  D+N R
Sbjct: 290 TPDGSKMM-----SFGDDCDVYVWDMNTR 313


>gi|33864867|ref|NP_896426.1| hypothetical protein SYNW0331 [Synechococcus sp. WH 8102]
 gi|33632390|emb|CAE06846.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
          Length = 159

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/112 (13%), Positives = 38/112 (33%), Gaps = 3/112 (2%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKE 326
           +       +     +  VDL S     L      +      S S D +++     R+ + 
Sbjct: 47  RWLASLTLRGGRERVDLVDLGSRQPVPLPGLNRADAQPISVSVSADGTRLAVVQQRDERT 106

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           +L + + N    +R+  +          +  G  +A     G ++ + +++ 
Sbjct: 107 ELVLYRRNVGTVQRLPLEPPGVPRAVSLNADGRRLAVQVSRGGRWEVDLIRL 158



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 39/99 (39%), Gaps = 3/99 (3%)

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
                RV L+D    +     G  R+    ++   S++G R  +  Q+DE  ++      
Sbjct: 55  RGGRERVDLVDLGSRQPVPLPGLNRADAQPISVSVSADGTRLAVVQQRDERTELVLYRRN 114

Query: 291 SNATERLT-NTLFINISASYSPDSSQIVFESDREGKEQL 328
               +RL      +  + S + D  ++  +  R G+ ++
Sbjct: 115 VGTVQRLPLEPPGVPRAVSLNADGRRLAVQVSRGGRWEV 153


>gi|284116099|ref|ZP_06386709.1| Serine/Threonine protein kinase with WD40 repeats [Candidatus
           Poribacteria sp. WGA-A3]
 gi|283829538|gb|EFC33891.1| Serine/Threonine protein kinase with WD40 repeats [Candidatus
           Poribacteria sp. WGA-A3]
          Length = 247

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 69/191 (36%), Gaps = 14/191 (7%)

Query: 151 WRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSR 210
           W+   H    ++        G ++        ++VSG     L + + +   +       
Sbjct: 23  WKAGIH----EVRTFRGHSHGVWDVAYAPDGLTLVSGGADRFLRIWEIETGRMIKSLKGH 78

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNG 269
              + +  FSP+ Q +A  + D      + L +       + +       +A   FS +G
Sbjct: 79  TNDIRQVAFSPDGQVLATGSDDR----TIRLWNPHTGETIRLLFTQYDHAVASLSFSPDG 134

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGKE 326
                   +++ + I+ +   +     L    +     +  ++SPD   +V  SD  GK 
Sbjct: 135 LMLA-RAGQNKDIKIWEITTGTEVMTLLGKDQYDHHWTVCTAFSPDGIHLVGGSD-IGKL 192

Query: 327 QLYVMQSNGSD 337
           +LY +  +G +
Sbjct: 193 KLYEVLPSGEE 203



 Score = 40.8 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 45/136 (33%), Gaps = 14/136 (10%)

Query: 308 SYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           +Y+PD   +V      G ++ L + +       +  +          +SP G ++A    
Sbjct: 44  AYAPDGLTLV----SGGADRFLRIWEIETGRMIKSLKGHTNDIRQVAFSPDGQVLATGSD 99

Query: 367 SGEKFAIGVMKK-DGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 I +     G   RLL    +    +  +SP G  L    +   +   K++ I  
Sbjct: 100 DRT---IRLWNPHTGETIRLLFTQYDHAVASLSFSPDGLMLA---RAGQNKDIKIWEITT 153

Query: 424 NGRNETLINTPAYASD 439
                TL+    Y   
Sbjct: 154 GTEVMTLLGKDQYDHH 169


>gi|207347256|gb|EDZ73495.1| YCR072Cp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 518

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 73/201 (36%), Gaps = 26/201 (12%)

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           +I          S  + A   + + Y+ I  + G+    ++       +     ++ + +
Sbjct: 338 RIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMV-------TASDDYTMFLWN 390

Query: 198 R-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
                          +++    FSP+ + +  A++D+        +     R  K I  F
Sbjct: 391 PLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNS-------IKLWDGRDGKFISTF 443

Query: 257 RSMILA---PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPD 312
           R  + +     +SS+  R L+S  KD  + ++  D+++      L        +  +S D
Sbjct: 444 RGHVASVYQVAWSSD-CRLLVSCSKDTTLKVW--DVRTRKLSVDLPGHKDEVYTVDWSVD 500

Query: 313 SSQIVFESDREGKEQLYVMQS 333
             ++       GK+++  + +
Sbjct: 501 GKRVC----SGGKDKMVRLWT 517



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 89/299 (29%), Gaps = 61/299 (20%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  +V+G   N+  + D D     +        +    +SP+ + +A  + D+     + 
Sbjct: 159 SSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDN----TIR 214

Query: 241 LMDTRIDRA-PKRIGNFRSMILAPRFSSN-----GKR-ALISVQKDEAMDIYSVDLQSNA 293
           L D +  +     +      I +  +        G +  L S  KD  + I+  D  S  
Sbjct: 215 LWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIW--DTVSRV 272

Query: 294 TERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSD----------QKRIS 342
            +   +    ++S   +      +++    +   +++ + S G               +S
Sbjct: 273 CQYTMSGHTNSVSCVKWG--GQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLS 330

Query: 343 QDKEASYFDPVWSPQGDL---------------------------IAFTKFSGEKFAIGV 375
              + +     +   G                             +  T        +  
Sbjct: 331 LSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWN 390

Query: 376 MKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             K      R+      +    +SP GR ++       D   KL+    +GR+   I+T
Sbjct: 391 PLKSTKPIARMTGHQKLVNHVAFSPDGRYIV---SASFDNSIKLW----DGRDGKFIST 442



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 38/124 (30%), Gaps = 11/124 (8%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
               +  +   R+   + ++    FS +G+  + S   D ++ ++         + ++  
Sbjct: 389 WNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIV-SASFDNSIKLW----DGRDGKFISTF 443

Query: 301 LFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                S    ++S D   +V  S       L V               +   +   WS  
Sbjct: 444 RGHVASVYQVAWSSDCRLLVSCSK---DTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVD 500

Query: 358 GDLI 361
           G  +
Sbjct: 501 GKRV 504


>gi|254459135|ref|ZP_05072557.1| caspase domain protein [Campylobacterales bacterium GD 1]
 gi|207084028|gb|EDZ61318.1| caspase domain protein [Campylobacterales bacterium GD 1]
          Length = 956

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 46/269 (17%), Positives = 101/269 (37%), Gaps = 26/269 (9%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRD----QILFEPRFSPNQQKV 226
           G     ++   + +++     ++ + DR G   R +    D      ++    S +++ +
Sbjct: 35  GLIRDIVITKDKDILTAGDDKTIRIWDRSGVEKRKILGQIDIGAAGSIYTIALSEDEKYL 94

Query: 227 AYATYDDE----------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           A   Y  +          +   + + D    +  K + +  ++I    FS +GK   IS 
Sbjct: 95  AVGGYLGKYTGTKARVDEESHWIRIHDYSTGKLHKVLKSHTNIINDLSFSDDGKYM-ISA 153

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNG 335
             D+++ I++V+   +  + +T              +    V     + K  LY MQ   
Sbjct: 154 SADDSVKIWNVNDDFSLEDTITFHSKDAYGGRVIKKNGKYYVVTVSYDNKIALYDMQ--- 210

Query: 336 SDQKRI-SQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
            ++K I SQ  +        S P GD IA     G+   I +   D +  + +  ++  +
Sbjct: 211 -NRKVIKSQSSDYQLKSLAVSNPFGDQIATC---GKGKEILIYDSDLNFVKKIKSETIPE 266

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSID 422
              +S   + LI S   +      +Y+++
Sbjct: 267 GLAFSKDEKMLI-SGTSNSPNIVNIYNVN 294


>gi|254409893|ref|ZP_05023673.1| hypothetical protein MC7420_7651 [Microcoleus chthonoplastes PCC
           7420]
 gi|196182929|gb|EDX77913.1| hypothetical protein MC7420_7651 [Microcoleus chthonoplastes PCC
           7420]
          Length = 367

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/245 (13%), Positives = 78/245 (31%), Gaps = 32/245 (13%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++   + +   +          +     SP+ +K+   +    +   + L + +
Sbjct: 91  TGSDDQTIKFWNLNTGQLLRTLSGHSDQVTALAISPDGEKL--VSGGGIEDGSIKLWNLK 148

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSN------ATER 296
                K       MI +   S +G+      + +    +  +   +L++         E 
Sbjct: 149 TGELIKTFQKKEGMIPSLAISPDGQILASGRRGEGLGFVSEIALWNLKTGEQLLQFEIEN 208

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           LT      +S ++SP+   +   S+      +++      +   I Q    S     ++ 
Sbjct: 209 LT------LSLAFSPNGELLASGSE---DGTIHLWNWQSGEILHILQ-HPQSLRALAFNQ 258

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW------SPSGRSLIFSRKK 410
            G ++    F+     + V   +  +  L+        P +       PSG  L  +   
Sbjct: 259 DGKVLVSESFAET---VNVWNPETGE--LVSTPVENPKPVFVNALALHPSGNILASALGP 313

Query: 411 DGDTG 415
            G  G
Sbjct: 314 YGRLG 318



 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 32/110 (29%), Gaps = 12/110 (10%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + S D   +   SD    + +     N     R              SP G+ +     S
Sbjct: 81  AISQDGQFLATGSD---DQTIKFWNLNTGQLLRTLSGHSDQVTALAISPDGEKLV----S 133

Query: 368 GEKFA---IGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFSRKKDG 412
           G       I +      +     +      P+   SP G+ L   R+ +G
Sbjct: 134 GGGIEDGSIKLWNLKTGELIKTFQKKEGMIPSLAISPDGQILASGRRGEG 183


>gi|153002390|ref|YP_001368071.1| peptidase S9 prolyl oligopeptidase [Shewanella baltica OS185]
 gi|151367008|gb|ABS10008.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Shewanella baltica OS185]
          Length = 686

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 41/110 (37%), Gaps = 6/110 (5%)

Query: 319 ESDREGKEQLYVMQSNGSDQKRI---SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            S  E K     + S  +    I       E +      S  G  +AFTK       I V
Sbjct: 25  TSTTEHKANTNRLNSQQAQVPLIPIEDFFNEQNIHHLKMSADGKWLAFTKEYQGASNIYV 84

Query: 376 M--KKDGSQERLLVEDSN-LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           M  K D +   LL +    ++   WS +   L F + K G+  ++++ + 
Sbjct: 85  MADKSDLASATLLTQSIEPIKEFEWSSNSNELFFMKDKGGNENTQIFKLS 134



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 75/184 (40%), Gaps = 20/184 (10%)

Query: 266 SSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
           S++GK    + +   A +IY +    DL S     LT ++       +S +S+++ F  D
Sbjct: 64  SADGKWLAFTKEYQGASNIYVMADKSDLAS--ATLLTQSIEPIKEFEWSSNSNELFFMKD 121

Query: 322 REGKEQLYVMQSNGSDQ--------KRISQDKEASYF---DPVWSPQGDLIAFTKFSGEK 370
           + G E   + + +            ++++ + +  Y     P  +P+  ++        +
Sbjct: 122 KGGNENTQIFKLSFETPQGKIEPKEQQLTHNDKVKYSVMEQPKDNPEQLVVMANHDESSR 181

Query: 371 FAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             I  +   DG    +   + NL    ++  G  +I S   + D    LY++ ++G    
Sbjct: 182 MDIYWLNTHDGKLTPIFENNLNLVQMKFNKQGHPVIGSST-NLDNSYSLYTL-IDGTWRK 239

Query: 430 LINT 433
           +I+T
Sbjct: 240 IIHT 243


>gi|29346532|ref|NP_810035.1| hypothetical protein BT_1122 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|154495400|ref|ZP_02034405.1| hypothetical protein PARMER_04457 [Parabacteroides merdae ATCC
           43184]
 gi|198276584|ref|ZP_03209115.1| hypothetical protein BACPLE_02780 [Bacteroides plebeius DSM 17135]
 gi|212694540|ref|ZP_03302668.1| hypothetical protein BACDOR_04068 [Bacteroides dorei DSM 17855]
 gi|253569457|ref|ZP_04846867.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|317477384|ref|ZP_07936615.1| hypothetical protein HMPREF1016_03600 [Bacteroides eggerthii
           1_2_48FAA]
 gi|29338428|gb|AAO76229.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|154085324|gb|EDN84369.1| hypothetical protein PARMER_04457 [Parabacteroides merdae ATCC
           43184]
 gi|198270672|gb|EDY94942.1| hypothetical protein BACPLE_02780 [Bacteroides plebeius DSM 17135]
 gi|212663041|gb|EEB23615.1| hypothetical protein BACDOR_04068 [Bacteroides dorei DSM 17855]
 gi|251841476|gb|EES69557.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|316906478|gb|EFV28201.1| hypothetical protein HMPREF1016_03600 [Bacteroides eggerthii
           1_2_48FAA]
          Length = 384

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 69/239 (28%), Gaps = 27/239 (11%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV---------AYAT 230
           V      G ++    ++   G         +  +     F+P+ + +          Y  
Sbjct: 148 VFSQDKKGKLQRDTKIIRFAGNGPNKKRQEQSHLHCV-TFTPDGKFLLATDLGTDCIYLF 206

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSV 287
              +            +    RI         PR   F  NG+ A +  +    + ++S 
Sbjct: 207 PIGKRPEAGKAHSLLDESRVVRIQMDSG--SGPRHICFHPNGRFAYLISELSGKITVFSY 264

Query: 288 DLQSNATERL---TNTLFI---NISASYSPDSSQIVFESDREGKEQLYVMQSNG--SDQK 339
           +      ERL       F+   N     S D  + ++ S    ++ + V   +       
Sbjct: 265 N--EGKLERLQTIVCDPFVAEGNADIHVSSDG-KFLYASKHLKEDGIIVYSIDSQKGTLV 321

Query: 340 RISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
           +I       Y      SP G  +A          I    ++    +   ++  L+ P +
Sbjct: 322 QIGFQPTGLYPRSFAISPDGCYLAVVCRDANCIQIFERNRNTGLLKNTGKNIRLERPAF 380



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 38/231 (16%), Positives = 76/231 (32%), Gaps = 29/231 (12%)

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR-IDRAPKRIGNFR 257
           DG    Y+T S  +       +     +   + D +  L+      R     P +    +
Sbjct: 120 DGELPIYITLSPKEYFVLTA-NYKGGSITVFSQDKKGKLQRDTKIIRFAGNGPNKKRQEQ 178

Query: 258 SMILAPRFSSNGKRALIS------------VQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           S +    F+ +GK  L +             ++ EA   +S+  +S       ++     
Sbjct: 179 SHLHCVTFTPDGKFLLATDLGTDCIYLFPIGKRPEAGKAHSLLDESRVVRIQMDSGSGPR 238

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS------QDKEASYFDPVWSPQGD 359
              + P+       S+  GK  + V   N    +R+          E +  D   S  G 
Sbjct: 239 HICFHPNGRFAYLISELSGK--ITVFSYNEGKLERLQTIVCDPFVAEGNA-DIHVSSDGK 295

Query: 360 LIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPTW--SPSGRSLI 405
            + +     ++  I V   D   G+  ++  + + L   ++  SP G  L 
Sbjct: 296 FL-YASKHLKEDGIIVYSIDSQKGTLVQIGFQPTGLYPRSFAISPDGCYLA 345


>gi|319780102|ref|YP_004139578.1| hypothetical protein Mesci_0355 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317165990|gb|ADV09528.1| hypothetical protein Mesci_0355 [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 324

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 51/305 (16%), Positives = 87/305 (28%), Gaps = 40/305 (13%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIG----KKFFSSPASWRKIAHTISDDIYQSITGE 169
           G    +  D L   F   D  + + I G    K F          A  ++    + IT  
Sbjct: 38  GHKTVQANDGLLAAF--HDAANDRLITGGEDGKVFAVKTGG---EATELASAARKWITSV 92

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYA 229
                  I + S          +  V   DG    ++ P   + L    FSP   +   A
Sbjct: 93  AAGPQGAIAYASG--------KTAFVRFADGKTREFVHPRSVEGL---AFSPKGMRFGVA 141

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            Y+        L     +  P  +  +        FS +G   + ++Q++ A+  +   L
Sbjct: 142 RYNG-----ATLHFPAAEGKPVEL-EWAGAHTGITFSPDGAFLVTTMQEN-ALHGWK--L 192

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD------QKRISQ 343
                 R+T       S S+S     +       G     V   +G D         +  
Sbjct: 193 ADGKHMRMTGYPGKVKSLSWSVKGKWLA----SSGAPAAIVWPFSGKDGPMGKAPLELGT 248

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
              A        P  D++A     G   A+          R   +   + +  W    R 
Sbjct: 249 RGNAMVTAVACHPSQDVVAVGYDDGMVMAVRFADAKEVLLRRPGK-GAITSMMWDKEERR 307

Query: 404 LIFSR 408
           + F  
Sbjct: 308 VAFGS 312



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/176 (14%), Positives = 57/176 (32%), Gaps = 28/176 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +GK  + +V+        +     +A  +   ++      + +  S +  F    +GK +
Sbjct: 66  DGK--VFAVKTGGEATELA-----SAARKWITSVAAGPQGAIAYASGKTAFVRFADGKTR 118

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            +V                 S     +SP+G      +++G             +   L 
Sbjct: 119 EFV--------------HPRSVEGLAFSPKGMRFGVARYNGATLHF---PAAEGKPVELE 161

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
                   T+SP G  L+ + +++   G KL     +G++  +   P       W 
Sbjct: 162 WAGAHTGITFSPDGAFLVTTMQENALHGWKL----ADGKHMRMTGYPGKVKSLSWS 213


>gi|239606850|gb|EEQ83837.1| WD domain-containing protein [Ajellomyces dermatitidis ER-3]
          Length = 1478

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 57/166 (34%), Gaps = 36/166 (21%)

Query: 286  SVDLQSNATERLTNTLFINISASY------------SPDSSQIVFESDREGKEQLYVMQS 333
             +D  + A      + F ++S SY            SPD   +   S  +  +++ +  S
Sbjct: 864  VMDTMTGAFR----SAFPDVSQSYFAGGTKKRKVALSPDGKFLAITSAFD--DKIRIWDS 917

Query: 334  NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNL 392
              +      +          +SP G+ IA T    +   +  +K      ++L  E+SNL
Sbjct: 918  KRAVIHSTLEGHVGRVSWIAFSPDGEYIASTSVD-KSMRLWEVK--SGHLKILFCEESNL 974

Query: 393  QAP--------------TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                             T+SP+G  +   R    D   +L+    N
Sbjct: 975  SFEKAQAFSFETLGNRITFSPNGEFIAGYRDDHDDHQVRLWDAKTN 1020



 Score = 36.9 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 52/174 (29%), Gaps = 31/174 (17%)

Query: 171  GDFNSRILFVSESVVSGIIKNSLCVMDRDG--------------------ANIRYLTPSR 210
            G F S    VS+S  +G  K     +  DG                    A I       
Sbjct: 870  GAFRSAFPDVSQSYFAGGTKKRKVALSPDGKFLAITSAFDDKIRIWDSKRAVIHSTLEGH 929

Query: 211  DQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAP------ 263
               +    FSP+ + +A  + D    +  V     +I    +   +F             
Sbjct: 930  VGRVSWIAFSPDGEYIASTSVDKSMRLWEVKSGHLKILFCEESNLSFEKAQAFSFETLGN 989

Query: 264  --RFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSS 314
               FS NG+         +   +   D ++N +   LT++  I     +S D  
Sbjct: 990  RITFSPNGEFIAGYRDDHDDHQVRLWDAKTNCSLGTLTHSHCILT-LEFSHDGK 1042


>gi|291298778|ref|YP_003510056.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Stackebrandtia nassauensis DSM 44728]
 gi|290567998|gb|ADD40963.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Stackebrandtia nassauensis DSM 44728]
          Length = 714

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 65/214 (30%), Gaps = 50/214 (23%)

Query: 203 IRYLTPSRDQILFEPRF---SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI----GN 255
           +R L  +R   L  PR    SP+ Q+V +            L    +D   +R+      
Sbjct: 7   LRQLARTRRFTLGVPRHVRVSPDGQRVVFVRSASGTDATRSLWSVDVDSGEERLLVDPAK 66

Query: 256 FRSMILAP------------------RFSSN-GKRALISVQKDEAMDIYSVDLQSNATER 296
                  P                   ++++ G R         A  +++VDL S     
Sbjct: 67  LAGGEDVPEEVRRLQERSRDLAAGVTDYATDAGLRVA---AIGLAGRLWTVDLLSGELTA 123

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--- 353
           L  T    I    SP    I + +       L V+ ++G   + ++   +A     +   
Sbjct: 124 LPAT-GPVIDPRPSPSGEHIAYVA----SGALRVIGADGGGDRALAIPDDADVSYGLAEY 178

Query: 354 -------------WSPQGDLIAFTKFSGEKFAIG 374
                        WSP GD +   K    +  I 
Sbjct: 179 AAAEDMHRLRGFWWSPDGDRLLVAKVDNRRVPIW 212



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 53/169 (31%), Gaps = 37/169 (21%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRI--------- 341
           T R T  L +      SPD  ++VF     G +    L+ +  +  +++ +         
Sbjct: 13  TRRFT--LGVPRHVRVSPDGQRVVFVRSASGTDATRSLWSVDVDSGEERLLVDPAKLAGG 70

Query: 342 -------------SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
                        S+D  A   D   +  G  +A    +G    +  +     +   L  
Sbjct: 71  EDVPEEVRRLQERSRDLAAGVTDYA-TDAGLRVAAIGLAG---RLWTVDLLSGELTALPA 126

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              +  P  SPSG  + +           L  I  +G  +  +  P  A
Sbjct: 127 TGPVIDPRPSPSGEHIAYVAS------GALRVIGADGGGDRALAIPDDA 169



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 71/241 (29%), Gaps = 45/241 (18%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------- 264
             + +PR SP+ + +AY       ++       R    P        +            
Sbjct: 128 GPVIDPRPSPSGEHIAYVASGALRVIGADGGGDRALAIPDDADVSYGLAEYAAAEDMHRL 187

Query: 265 ----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S +G R L++   +  + I+ +           + L    +  Y    +      
Sbjct: 188 RGFWWSPDGDRLLVAKVDNRRVPIWHLADPG-------DPLAAPTTIRYPAAGTANA--- 237

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYF--DPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
               +  L V   +GS    +  D EA  +     WS  G +++          +  +  
Sbjct: 238 ----EVTLSVRGLDGSTVD-VDWDNEAHEYLIAAHWSRGGAVVSVQSRDHSSLLVRRLDP 292

Query: 379 DGSQERLLVEDSNLQAPTW-SP--------SGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           D      L        P W +P         G  L++    DG      Y + ++G   T
Sbjct: 293 DTGA---LTTLRAESDPAWVTPFRGVPAYTDGGELVWGANVDGS-----YRLLVDGEAVT 344

Query: 430 L 430
            
Sbjct: 345 P 345


>gi|92118401|ref|YP_578130.1| oligopeptidase B [Nitrobacter hamburgensis X14]
 gi|91801295|gb|ABE63670.1| oligopeptidase B, Serine peptidase, MEROPS family S09A [Nitrobacter
           hamburgensis X14]
          Length = 697

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 11/128 (8%)

Query: 304 NISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVW------- 354
           + S   SPD     F   REG +   +     +G D + +      +     +       
Sbjct: 86  DDSTVPSPDGPFAYFTKYREGGQHRMIGRQPRDGGDARFVIDGDALAEGKKFFQLGGGRH 145

Query: 355 SPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP   L A++        F I V   D   +   V +       WS   R+  + +  D 
Sbjct: 146 SPDHRLEAWSADDRGSEYFTIRVRDWDSGTDLADVIEETDGGVVWSADSRAFYYVKLDDN 205

Query: 413 DTGSKLYS 420
               ++Y 
Sbjct: 206 HRPMQVYR 213


>gi|326919372|ref|XP_003205955.1| PREDICTED: WD repeat-containing protein 1-like [Meleagris
           gallopavo]
          Length = 603

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 76/255 (29%), Gaps = 55/255 (21%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + + D   I  +       +   +++P+   +A  + D    LR++    +         
Sbjct: 38  IRNIDNPAIADIYTEHAHQVVVAKYAPSGFYIA--SGDVSGKLRIWDTTQKEHLLKYEYQ 95

Query: 255 NFRSMILAPRFSSNGKRALISVQK--------------------DEAMDIYSVDLQSNAT 294
            F   I    ++ + KR  +  +                          I SVD++    
Sbjct: 96  PFAGKIKDLAWTEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHNKVINSVDIKQTRP 155

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
            RL      N +A +             EG    +  +   SD  R             +
Sbjct: 156 YRLATGSDDNCAAFF-------------EGPP--FKFKFTLSDHTRF-------VNCVRF 193

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTWSPSGRSLIFSRK 409
           SP G+  A     G    I +      ++          D  + A +WSP    L+    
Sbjct: 194 SPDGNRFATASADG---QIFIYDGKTGEKVCALGGGKAHDGGIYAISWSPDSCQLL---S 247

Query: 410 KDGDTGSKLYSIDLN 424
             GD  +K++ +  N
Sbjct: 248 ASGDKTAKIWDVGAN 262



 Score = 43.5 bits (101), Expect = 0.070,   Method: Composition-based stats.
 Identities = 39/268 (14%), Positives = 86/268 (32%), Gaps = 40/268 (14%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 5   FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVVIRNIDNPAIADIYTE----HAHQVVVA 60

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA--------------- 155
           +    G       +  + R+WD   ++ ++  ++       + +A               
Sbjct: 61  KYAPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDLAWTEDSKRIAVVGEGR 120

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRD-------GANIRYLTP 208
                          G+       ++   +       L     D       G   ++   
Sbjct: 121 EKFGAVFLWDSGSSVGEITGHNKVINSVDIKQTRPYRLATGSDDNCAAFFEGPPFKFKFT 180

Query: 209 SRDQILFEP--RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAP 263
             D   F    RFSP+  + A A+ D     ++++ D +       +G  +     I A 
Sbjct: 181 LSDHTRFVNCVRFSPDGNRFATASADG----QIFIYDGKTGEKVCALGGGKAHDGGIYAI 236

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +S +  + L S   D+   I+ V   S
Sbjct: 237 SWSPDSCQLL-SASGDKTAKIWDVGANS 263


>gi|326499161|dbj|BAK06071.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 227

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/166 (12%), Positives = 45/166 (27%), Gaps = 16/166 (9%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +   +++  +    + P   + A   + D DI    +  T       ++         
Sbjct: 54  EFFELDNKNDKIIAFAWEPKGHRFA-VIHGDGDISFYTVRTTNNLSCVCKLTTLNGRQAN 112

Query: 263 PR-FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S  G+  +++  KD    +   +L    T  +      ++   + P    +     
Sbjct: 113 ALFWSPAGRFIVLAGLKDRNGQMEFYNLDDLETMAVAEHKATDVM--WDPTGRFLA---- 166

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
                   V +    +        E      VWS  G  I      
Sbjct: 167 ---TVVTSVHEMGNGNS-----ASEMGTGFQVWSFDGKQICKVSKD 204


>gi|323305843|gb|EGA59581.1| Rsa4p [Saccharomyces cerevisiae FostersB]
          Length = 197

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 53/131 (40%), Gaps = 18/131 (13%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA---P 263
                +++    FSP+ + +  A++D+        +     R  K I  FR  + +    
Sbjct: 80  MTGHQKLVNHVAFSPDGRYIVSASFDNS-------IKLWDGRDGKFISTFRGHVASVYQV 132

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDR 322
            +SS+  R L+S  KD  + ++  D+++      L        +  +S D  ++      
Sbjct: 133 AWSSD-CRLLVSCSKDTTLKVW--DVRTRKLSVDLPGHKDEVYTVDWSVDGKRVC----S 185

Query: 323 EGKEQLYVMQS 333
            GK+++  + +
Sbjct: 186 GGKDKMVRLWT 196



 Score = 42.3 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 38/124 (30%), Gaps = 11/124 (8%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
               +  +   R+   + ++    FS +G+  + S   D ++ ++         + ++  
Sbjct: 68  WNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIV-SASFDNSIKLW----DGRDGKFISTF 122

Query: 301 LFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                S    ++S D   +V  S       L V               +   +   WS  
Sbjct: 123 RGHVASVYQVAWSSDCRLLVSCSK---DTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVD 179

Query: 358 GDLI 361
           G  +
Sbjct: 180 GKRV 183


>gi|163749357|ref|ZP_02156606.1| dipeptidyl peptidase IV, putative [Shewanella benthica KT99]
 gi|161331076|gb|EDQ02002.1| dipeptidyl peptidase IV, putative [Shewanella benthica KT99]
          Length = 829

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 30/200 (15%), Positives = 76/200 (38%), Gaps = 13/200 (6%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-----TERLTNTLF 302
           R  + + ++     A ++ S+G    I ++  +  D +   L           RL +  +
Sbjct: 366 RKIQLMQDWGWSQSAVQWQSSGNGVAIMLEAIDNKDRWIASLDMGKGTLKTEHRLHDNAW 425

Query: 303 INISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           +N + +   +   +  + + S+  G   LY ++  G + + ++Q  E         P+ +
Sbjct: 426 VNYTFNQFGWVTGTDSLYYLSEETGYSHLY-LKQQGKEAEPLTQ-GEFVVSSVTLGPKAE 483

Query: 360 LIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
            I +   K       +  +     ++  L +         SP G SL+ +  +  +  ++
Sbjct: 484 FIYYKANKAHPGIDNVYRVSIATGKDEQLTQWDGQLDYKLSPDGNSLLLNASRRTEP-AE 542

Query: 418 LYSIDLNGRNETLINTPAYA 437
           L+   + G  + L +  + A
Sbjct: 543 LFVKVIGGDRKQLTHYTSEA 562



 Score = 40.8 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 19/154 (12%), Positives = 54/154 (35%), Gaps = 5/154 (3%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSV 287
            Y  E+    +L   +  +  + +     ++ +       +       K      ++Y V
Sbjct: 443 YYLSEETGYSHLYLKQQGKEAEPLTQGEFVVSSVTLGPKAEFIYYKANKAHPGIDNVYRV 502

Query: 288 DLQSNATERLTNTLF-INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            + +   E+LT     ++     SPD + ++  + R  +     ++  G D+K+++    
Sbjct: 503 SIATGKDEQLTQWDGQLDY--KLSPDGNSLLLNASRRTEPAELFVKVIGGDRKQLTHYTS 560

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            ++ +  W     ++  +     +    V    G
Sbjct: 561 EAFKNYPWQAPEVVVVPSSHGAGEVYARVYLPQG 594


>gi|75003131|sp|Q5DFU0|CIAO1_SCHJA RecName: Full=Probable cytosolic iron-sulfur protein assembly
           protein
 gi|56754257|gb|AAW25316.1| SJCHGC05198 protein [Schistosoma japonicum]
          Length = 352

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 59/170 (34%), Gaps = 11/170 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            + P+   +A    D + +      D    +    +      + +  +  +G   L+S  
Sbjct: 115 AWCPSGHLIATCGRD-KSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAWHPHG-EVLVSTS 172

Query: 278 KDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  +++Y  +L       +L+        A +SP    +   SD +   +L+  +    
Sbjct: 173 YDNKINVYREELDDWTVFAQLSGHDSTVWKAEFSPSGDILASCSD-DLCVKLWSWEGVCG 231

Query: 337 DQK------RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                     +S     + FD  WSP   L+A +  S  +  I  M  +G
Sbjct: 232 KSSSWMCIATLSGYHTRTIFDLNWSPDSQLLA-SCGSDNRLCIYKMPANG 280


>gi|71423367|ref|XP_812435.1| chromatin assembly factor 1 subunit B [Trypanosoma cruzi strain CL
           Brener]
 gi|70877214|gb|EAN90584.1| chromatin assembly factor 1 subunit B, putative [Trypanosoma cruzi]
          Length = 614

 Score = 45.0 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 25/174 (14%), Positives = 54/174 (31%), Gaps = 24/174 (13%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             +    R+SP+   +A A  D +                  +  + +      +    F
Sbjct: 151 SWMPLTARWSPHGSMIASAHCDGKICLWWQEKHEDGKKEEEWKDYRHLSGHVIDVYDLCF 210

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREG 324
           S + +  L S   D ++ I+ ++  +    +LT          ++ P    +   S   G
Sbjct: 211 SPDSRYLL-SAGGDGSVVIHDLEGSTVPVVQLTEVHHKFCRGVAWDPWCKYVA--SFGGG 267

Query: 325 KEQLYVMQSN--GSDQKRISQDKE-------------ASYFDPVWSPQGDLIAF 363
              L+   +       +R+    +              ++    WSP G L+A 
Sbjct: 268 PPLLFFTHTAKTTGASRRVHLTGQRKAPGDYIGESCATTFRRFGWSPDGSLVAV 321



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 52/174 (29%), Gaps = 33/174 (18%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDL--QSNATE-----RLTNTLFINI-SASYS 310
           M L  R+S +G     S   D  + ++  +        E     R  +   I++    +S
Sbjct: 153 MPLTARWSPHGSMIA-SAHCDGKICLWWQEKHEDGKKEEEWKDYRHLSGHVIDVYDLCFS 211

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           PDS  ++      G   + +    GS     ++++          W P    +A   F G
Sbjct: 212 PDSRYLL---SAGGDGSVVIHDLEGSTVPVVQLTEVHHKFCRGVAWDPWCKYVA--SFGG 266

Query: 369 EKFAIGVMKK--DGSQERLLVEDSNLQAPT---------------WSPSGRSLI 405
               +            R +      +AP                WSP G  + 
Sbjct: 267 GPPLLFFTHTAKTTGASRRVHLTGQRKAPGDYIGESCATTFRRFGWSPDGSLVA 320


>gi|320160355|ref|YP_004173579.1| hypothetical protein ANT_09450 [Anaerolinea thermophila UNI-1]
 gi|319994208|dbj|BAJ62979.1| hypothetical protein ANT_09450 [Anaerolinea thermophila UNI-1]
          Length = 306

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 24/201 (11%), Positives = 61/201 (30%), Gaps = 36/201 (17%)

Query: 219 FSPNQQKVAYATYDDEDIL---RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           + P +  +AY       I     + L      +    +    S+     +S +GK+    
Sbjct: 73  WHPEEMTLAYVAPKGRSIWFTGEILLSSGSDYKTSTVLFENTSVFGDLTWSPSGKQLAFV 132

Query: 276 V--QKDEAMDIYSVDLQS--------NATERLTNTLFINISASYSPDSSQIVFESDREGK 325
              Q +    +   +L++             LT+         +  ++   +  S   G 
Sbjct: 133 ALRQPENVYTVMVTNLETQQTVDILPGEQATLTSGSGSKGIVEWLSENQIRIIASC--GA 190

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           +   ++  N S  + +   +   +     SP    +++ + +                  
Sbjct: 191 DCDVMLDVNLSSGQVVPYGETMRHQADRLSPTRKTLSYDEKTYPP--------------- 235

Query: 386 LVEDSNLQAPTWSPSGRSLIF 406
                 + +P WSP G+ + +
Sbjct: 236 ------MLSPNWSPDGKKVAY 250



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 24/215 (11%), Positives = 71/215 (33%), Gaps = 33/215 (15%)

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD-DED 235
           + +V+    S      + +          +      +  +  +SP+ +++A+      E+
Sbjct: 80  LAYVAPKGRSIWFTGEILLSSGSDYKTSTVLFENTSVFGDLTWSPSGKQLAFVALRQPEN 139

Query: 236 ILRVYLMDTRIDRAP-------KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
           +  V + +    +           + +         + S  +  +I+    +   +  V+
Sbjct: 140 VYTVMVTNLETQQTVDILPGEQATLTSGSGSKGIVEWLSENQIRIIASCGADCDVMLDVN 199

Query: 289 LQSNATE-----------RLTNTL---FIN-------ISASYSPDSSQIVFESDREGKEQ 327
           L S               RL+ T      +       +S ++SPD  ++ +  D +   Q
Sbjct: 200 LSSGQVVPYGETMRHQADRLSPTRKTLSYDEKTYPPMLSPNWSPDGKKVAYFDDLD---Q 256

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +V+       + +      + ++  W+    ++A
Sbjct: 257 AWVL-LTQEKAQFLLDIGLQTPYESQWASDSRILA 290


>gi|256421238|ref|YP_003121891.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256036146|gb|ACU59690.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 594

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 60/154 (38%), Gaps = 27/154 (17%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGK--------EQLYVMQSNGSDQKRIS-----QDK 345
           N +  N +  +    + +VF S R  K         +LY           +      Q K
Sbjct: 188 NPVGANYAPVWY-KENVLVFTSTRPDKDVKGHAFVNRLYSADYTTGQPDTVRHLDIPQPK 246

Query: 346 EASYFDPVWSPQGDLIAFTKFS----GEKFAIGVMKKDG---SQERLL-----VEDSNLQ 393
           +        +P G+ +  T+++     +  AI   KK G   ++  +L     V   + Q
Sbjct: 247 DVDQGVMALTPDGNTLFLTRWTVKQGKKSAAIYSSKKTGDTWTEPVILDTVLNVPGFSAQ 306

Query: 394 APTWSPSGRSLIFSRKKDGDTGS-KLYSIDLNGR 426
            P  +P G+ LI++  + G  G+  L+  +LNG 
Sbjct: 307 QPFVTPDGKRLIYASDRPGGAGAFDLWEAELNGE 340



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/198 (15%), Positives = 60/198 (30%), Gaps = 30/198 (15%)

Query: 180 VSESVVSGIIKNSLCVMDR-----DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
             + V      N L   D      D      +   +D        +P+   +    +  +
Sbjct: 211 PDKDVKGHAFVNRLYSADYTTGQPDTVRHLDIPQPKDVDQGVMALTPDGNTLFLTRWTVK 270

Query: 235 DILR---VYLMDTRIDRAPKRIGNFRSMILAPRFS-------SNGKRALISVQKDEA--- 281
              +   +Y      D   + +     + + P FS        +GKR + +  +      
Sbjct: 271 QGKKSAAIYSSKKTGDTWTEPVILDTVLNV-PGFSAQQPFVTPDGKRLIYASDRPGGAGA 329

Query: 282 MDIYSVDLQSNATERLT-------NTLFINISASYSPDSSQIVFESD----REGKEQLYV 330
            D++  +L    T   T       NT +   +  Y   S  +VF +D      G +  Y 
Sbjct: 330 FDLWEAELNGEGTPFFTKNLGPVVNTPWNEEAPYYHAASGLLVFSTDGRVGMGGFDFFYS 389

Query: 331 MQSNGSDQKRISQDKEAS 348
             S G+    ++     +
Sbjct: 390 KDSAGAWSAPVNFGYPVN 407


>gi|163755951|ref|ZP_02163068.1| 50S ribosomal protein L33 [Kordia algicida OT-1]
 gi|161324122|gb|EDP95454.1| 50S ribosomal protein L33 [Kordia algicida OT-1]
          Length = 808

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 37/244 (15%), Positives = 88/244 (36%), Gaps = 56/244 (22%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-----DILRVYLMDTRIDRAP 250
           MD  G N  +L  S  + + E   S  + ++A    + +            ++ RI R  
Sbjct: 46  MDSKGENFYFLYRSSYKTIAE--LSEKELRLAGLRINPKTNIGSRQSYYNRLEIRIGRNS 103

Query: 251 K------RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +           +      R+S +  +  ++   D  ++++ VD  + + ++LT+    N
Sbjct: 104 REETVKGLPTTGKFANF--RWSPDETKIALTNTTDTGVELWIVDFTTKSAKKLTDA---N 158

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           ++A+               G   ++   S     K++   ++A     +  P G  I+ +
Sbjct: 159 LNANI--------------GSPYMWFKNSQSLLVKKVPNGRKALINTAITIPTGPTISVS 204

Query: 365 ---------------KFSGEKFA--------IGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                          K   ++F         +  +  DG+   L  E +  ++ ++SP+G
Sbjct: 205 EKGKKAQNRTYQDLLKNKNDEFNFEQLATSELYKVDLDGTN-TLWKEKNMYKSMSFSPNG 263

Query: 402 RSLI 405
             ++
Sbjct: 264 EFIM 267



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 7/78 (8%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAP-TW 397
           +  K A++    WSP    IA T  +     + ++       + L +   ++N+ +P  W
Sbjct: 113 TTGKFANF---RWSPDETKIALTNTTDTGVELWIVDFTTKSAKKLTDANLNANIGSPYMW 169

Query: 398 SPSGRSLIFSRKKDGDTG 415
             + +SL+  +  +G   
Sbjct: 170 FKNSQSLLVKKVPNGRKA 187


>gi|146342625|ref|YP_001207673.1| hypothetical protein BRADO5790 [Bradyrhizobium sp. ORS278]
 gi|146195431|emb|CAL79456.1| conserved hypothetical protein; putative exported protein
           [Bradyrhizobium sp. ORS278]
          Length = 367

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 74/242 (30%), Gaps = 23/242 (9%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
            R   V  S   G  K ++  +  +G   A  + +    +   F P  SP+  +  +AT 
Sbjct: 123 DRTGKVLFSASYGGNKVAVNPVQANGVVAAPSQVIPTGLNAHAFLP--SPD-NRFVFATN 179

Query: 232 DDEDILRVYLMDTRIDRAP--KRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYS 286
              D +  +  D         + +         PR   F  NGK   +  + +  + +Y+
Sbjct: 180 LGSDQVLGFAFDAAAGTLTANEALTVKTPEKSGPRHFIFHPNGKFIYLLHELNADLAVYA 239

Query: 287 VDLQSNATE---RLTNTLFINISASYS------PDSSQIVFESDREGKE-QLYVMQSNGS 336
            D +  +     R T          ++      PD  Q ++ S+R       + + +   
Sbjct: 240 YDAEKGSWTEQQRTTTLPAGFTGKPWAADLHATPDG-QFLYASERGSNTLAAFKIDAASG 298

Query: 337 DQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
               I S   E         P G  +A          +  +         +   +  + P
Sbjct: 299 RLTLIGSVPTETQPRGFAIDPAGRYLAAVGEVSNGMTVYKIDAASGALEKVKSFAVGKKP 358

Query: 396 TW 397
            W
Sbjct: 359 NW 360


>gi|45190858|ref|NP_985112.1| AER255Cp [Ashbya gossypii ATCC 10895]
 gi|44983900|gb|AAS52936.1| AER255Cp [Ashbya gossypii ATCC 10895]
          Length = 467

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 49/275 (17%), Positives = 84/275 (30%), Gaps = 34/275 (12%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTP---SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
           SG     L + D    + R L        + +    FS +  + A ++YD      V + 
Sbjct: 192 SGGNDGVLKIWDM--YHERLLLRDYCGHRKAISATSFSHDNVQFASSSYDK----TVKIW 245

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNATERLTNT 300
           DT       R+ +F++      F    K  L+    D  +  +   VD +    +   + 
Sbjct: 246 DTETGDIINRL-SFKATPNCMTFHPQNKEQLLVGFSDSKIRHFDLRVDKKDGVIQIYDHH 304

Query: 301 LFINISASYSPDSSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L    +  Y PD S+ +  SD    R  + Q+ +        K+IS   +         P
Sbjct: 305 LAAINALRYFPDGSKFISSSDDKSIRIWENQINI------PIKQISDTDQYPAPWIQLHP 358

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED----SNLQAPTWSPSGRSLIFSRKKDG 412
           + +  A        +   +  K     R                 +P GR +       G
Sbjct: 359 EHNQFAAQSMDNSIYVYSMKPKYKRHPRKAFRGHKSAGYNSMFDIAPDGRYVA-----AG 413

Query: 413 DTGSKLYSIDLNGRN--ETLINTPAYA-SDPQWVG 444
           DT  +L+  D         L  T         W  
Sbjct: 414 DTSGRLFIWDWKTTKILRQLETTKGETLKQVAWSP 448


>gi|332291677|ref|YP_004430286.1| secreted prolyl oligopeptidase family protein [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332169763|gb|AEE19018.1| secreted prolyl oligopeptidase family protein [Krokinobacter
           diaphorus 4H-3-7-5]
          Length = 678

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 5/82 (6%)

Query: 355 SPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKKD 411
           SP G  +++  + +  K  + +       E  LVE     +++  W+ S   +++S+ K 
Sbjct: 77  SPDGKYLSYMKRRADGKRDLFLKNTSTQTEVKLVEQQEDLIRSYFWA-SEDRIVYSQDKG 135

Query: 412 GDTGSKLYSIDLNGR-NETLIN 432
           G+    L+ ++L+G  NE L  
Sbjct: 136 GNENYHLFGVNLDGSGNEELTP 157


>gi|326329526|ref|ZP_08195849.1| hypothetical protein NBCG_00961 [Nocardioidaceae bacterium Broad-1]
 gi|325952693|gb|EGD44710.1| hypothetical protein NBCG_00961 [Nocardioidaceae bacterium Broad-1]
          Length = 853

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 44/261 (16%), Positives = 87/261 (33%), Gaps = 37/261 (14%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRIGNF 256
            +I +    R  I      +  +  +A++      +DE I  V   +    R        
Sbjct: 519 QSIHWTDNPRSDIPVSESLAVGRAILAFSDEVGAIEDEGIAVVVTAEGDYQRLRLPGVEG 578

Query: 257 RSMILAPR---FSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSP 311
            S IL  R    S +G       +      +  +DL++       +T       S ++SP
Sbjct: 579 TSNILMARPILLSPDGTHLAYVTE---EPSVNVLDLETGEVAPHPVTLGGDEITSIAWSP 635

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           DS+ +V+ SD E  ++   +  +G+    +       + +      G  +A +  SG +F
Sbjct: 636 DSTWLVWHSDYE-DQRAGRITPDGT----VEPLPGGDWANAGIGNDGT-VAASTASGTRF 689

Query: 372 ----AIGVMKKDGSQERL------LVEDSNLQAPTWSPS-GRSLIFSRKKDGDTGSKLYS 420
                   +   G + +         ED      T        + F+    G        
Sbjct: 690 WPEDDAADLPGAGQEGQSTWVGTGTTEDGRDDVRTIESDLSTRVDFTIGPTGRG------ 743

Query: 421 IDLNGRNETLINTPAYASDPQ 441
           +D++GR   L+    + +D  
Sbjct: 744 VDVDGR--RLVEVAGWLADGT 762



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 45/301 (14%), Positives = 96/301 (31%), Gaps = 41/301 (13%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
              +  TG +    + ++ V     + +   S+     D A+I++ T  R +  F P ++
Sbjct: 379 WAVEDATGGEDIGGTSLIAVDGDANTVVDTISIAYALIDAASIKHPTVHRSKPFFMPLWA 438

Query: 221 PNQQKVAYATYDD------EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS------N 268
                + +               RV L+   +      +G    +     FS       +
Sbjct: 439 --GTALFWLVAVVVVGALWRRARRVLLVVGVLAALIVLVGALFLIDTTGVFSRGDAEEGS 496

Query: 269 GKRALISVQKDE--AMDIYSVDLQSNATERLTNTL--FINISASYSPDSSQIVFESDREG 324
           G    I+       A     V      +   T+     I +S S +   + + F SD  G
Sbjct: 497 GGTIEIASASPGTEAPSRAVVP----QSIHWTDNPRSDIPVSESLAVGRAILAF-SDEVG 551

Query: 325 K---EQLYVMQSNGSDQKRISQDKEASYFDPVW------SPQGDLIAFTKFSGEKFAIGV 375
               E + V+ +   D +R+         + +       SP G  +A+         + V
Sbjct: 552 AIEDEGIAVVVTAEGDYQRLRLPGVEGTSNILMARPILLSPDGTHLAYVTEEPS---VNV 608

Query: 376 MKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +  +  +     + +    + +  WSP    L++    +     ++     +G  E L  
Sbjct: 609 LDLETGEVAPHPVTLGGDEITSIAWSPDSTWLVWHSDYEDQRAGRI---TPDGTVEPLPG 665

Query: 433 T 433
            
Sbjct: 666 G 666


>gi|325288015|ref|YP_004263805.1| WD40-like beta Propeller containing protein [Cellulophaga lytica
           DSM 7489]
 gi|324323469|gb|ADY30934.1| WD40-like beta Propeller containing protein [Cellulophaga lytica
           DSM 7489]
          Length = 405

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 63/187 (33%), Gaps = 28/187 (14%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFE-------- 319
           GK    S        + +V  Q+N  E +T+         + + D     F         
Sbjct: 144 GKYGEYSFNPKGNSSLETVTQQNNYLEEITDKHNAYKTPVAVTADGKTAYFSKGVYVKPA 203

Query: 320 ----SDREGKEQLYVMQSNGSDQKRISQ----DKEASYFDPVWSPQGDLIAFTKFSG--- 368
               S +E   ++Y  ++     K + +     K  S   P  S  G  + F        
Sbjct: 204 TGIFSKKELVHKIYRAENVNGQWKNVKEIALAPKNYSAMHPTVSADGKRLFFASNMPGTF 263

Query: 369 EKFAIGV--MKKDG--SQERLLVEDSNLQAPTWSP---SGRSLIFSRK-KDGDTGSKLYS 420
            KF I V  +K +G     + L +  N +     P   +G SL F+     G  G  +Y 
Sbjct: 264 GKFDIYVASIKANGDFGVAKNLGQKVNTEKNDLYPKIVNGNSLFFASNGHKGYGGLDIYM 323

Query: 421 IDLNGRN 427
           +++  R 
Sbjct: 324 VEVGQRK 330


>gi|323334422|gb|EGA75799.1| Rsa4p [Saccharomyces cerevisiae AWRI796]
          Length = 515

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 73/201 (36%), Gaps = 26/201 (12%)

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           +I          S  + A   + + Y+ I  + G+    ++       +     ++ + +
Sbjct: 335 RIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMV-------TASDDYTMFLWN 387

Query: 198 R-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
                          +++    FSP+ + +  A++D+        +     R  K I  F
Sbjct: 388 PLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNS-------IKLWDGRDGKFISTF 440

Query: 257 RSMILA---PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPD 312
           R  + +     +SS+  R L+S  KD  + ++  D+++      L        +  +S D
Sbjct: 441 RGHVASVYQVAWSSD-CRLLVSCSKDTTLKVW--DVRTRKLSVDLPGHKDEVYTVDWSVD 497

Query: 313 SSQIVFESDREGKEQLYVMQS 333
             ++       GK+++  + +
Sbjct: 498 GKRVC----SGGKDKMVRLWT 514



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 89/299 (29%), Gaps = 61/299 (20%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  +V+G   N+  + D D     +        +    +SP+ + +A  + D+     + 
Sbjct: 156 SSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDN----TIR 211

Query: 241 LMDTRIDRA-PKRIGNFRSMILAPRFSSN-----GKR-ALISVQKDEAMDIYSVDLQSNA 293
           L D +  +     +      I +  +        G +  L S  KD  + I+  D  S  
Sbjct: 212 LWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIW--DTVSRV 269

Query: 294 TERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSD----------QKRIS 342
            +   +    ++S   +      +++    +   +++ + S G               +S
Sbjct: 270 CQYTMSGHTNSVSCVKWG--GQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLS 327

Query: 343 QDKEASYFDPVWSPQGDL---------------------------IAFTKFSGEKFAIGV 375
              + +     +   G                             +  T        +  
Sbjct: 328 LSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWN 387

Query: 376 MKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             K      R+      +    +SP GR ++       D   KL+    +GR+   I+T
Sbjct: 388 PLKSTKPIARMTGHQKLVNHVAFSPDGRYIV---SASFDNSIKLW----DGRDGKFIST 439



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 38/124 (30%), Gaps = 11/124 (8%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
               +  +   R+   + ++    FS +G+  + S   D ++ ++         + ++  
Sbjct: 386 WNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIV-SASFDNSIKLW----DGRDGKFISTF 440

Query: 301 LFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                S    ++S D   +V  S       L V               +   +   WS  
Sbjct: 441 RGHVASVYQVAWSSDCRLLVSCSK---DTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVD 497

Query: 358 GDLI 361
           G  +
Sbjct: 498 GKRV 501


>gi|320169967|gb|EFW46866.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 378

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 75/212 (35%), Gaps = 36/212 (16%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP---- 250
           ++D +  ++        + +   ++SPN +  A A+YD    L   +             
Sbjct: 132 IVDIETGDVLQTFADHTKFVVRVQWSPNGEYFATASYDHHVGLYRRVQKVSKPVEDDDDS 191

Query: 251 -----------KRIGN--FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER- 296
                      +R+G+  F     A  FS  G    ++ + D    ++ V+L S   ER 
Sbjct: 192 DAEEEPAPFKFERVGHFLFEGYAEALCFSPEGDELCMAARND--CFLHFVELTSGNYERS 249

Query: 297 ------L--TNTLFINISASYSPDSSQ-IVFESDREGKEQLYVMQSNGSDQKRI---SQD 344
                 L  T+  F  +  SYSP   + ++  +D   K +L +      +Q R    + +
Sbjct: 250 KMNMNALGDTHVSFTALDVSYSPFGKKYLLVCTD---KNRLILYARETGEQLRHFYGTNN 306

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            E S     W P G  I F         I  M
Sbjct: 307 DEWSTPRHCWHPSGQYI-FATSQDRCIYIWEM 337


>gi|308172510|ref|YP_003919215.1| hypothetical protein BAMF_0619 [Bacillus amyloliquefaciens DSM 7]
 gi|307605374|emb|CBI41745.1| putative membrane protein [Bacillus amyloliquefaciens DSM 7]
 gi|328552273|gb|AEB22765.1| hypothetical protein BAMTA208_02890 [Bacillus amyloliquefaciens
           TA208]
 gi|328910614|gb|AEB62210.1| hypothetical protein LL3_00663 [Bacillus amyloliquefaciens LL3]
          Length = 348

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 9/93 (9%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK----DEAMDIYSVDLQSNATERLTN- 299
                 + + N    I     S +GK  + +       ++   I  +++++   E + + 
Sbjct: 214 GAGDHLQDLTNLEQFISDIAMSPDGKNLVFTSYTQKGTEQKASIRLMNVKTKKDETIISN 273

Query: 300 ----TLFINISASYSPDSSQIVFESDREGKEQL 328
               T  I+    +S D S I F ++ +G ++L
Sbjct: 274 GKDFTPLIDAQPQFSKDGSIIYFMAEAKGAKRL 306



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 39/265 (14%), Positives = 83/265 (31%), Gaps = 57/265 (21%)

Query: 211 DQILFEPRFSPN--QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF--S 266
           +++   P F+ +   Q + Y   +D++ +R+Y +D +  +       ++    A     S
Sbjct: 68  EKLSAYPAFALDDAHQVLYYVGNNDQNEMRLYKLDLKTKQKTVL---YKGSASADSLFLS 124

Query: 267 SNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
            +       +    ++   + S DL++   + L      +       D S   F  +R  
Sbjct: 125 KDKTHIYFRLGKADEDIFRLASFDLKTKRYQNL--YPAADEK-----DDSVSGFFYNRSQ 177

Query: 325 K---------------------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                                              +   D  +   + E    D   SP 
Sbjct: 178 NDFALLHYSVKEDYKKTDEANEKGVDPEPTNIRFAAGAGDHLQDLTNLEQFISDIAMSPD 237

Query: 358 GDLIAFTKFSGE----KFAIGVMKKDGSQERLLVEDSNLQ------APTWSPSGRSLIFS 407
           G  + FT ++ +    K +I +M     ++  ++ +           P +S  G  + F 
Sbjct: 238 GKNLVFTSYTQKGTEQKASIRLMNVKTKKDETIISNGKDFTPLIDAQPQFSKDGSIIYFM 297

Query: 408 RKKDGDTGSKLYSIDLNGRNETLIN 432
            +  G    K    D  GRN  +  
Sbjct: 298 AEAKGAKRLK----DETGRNAKVRT 318



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 36/99 (36%), Gaps = 9/99 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDTRIDRAPKRIGNFRS----M 259
             + +Q + +   SP+ + + + +Y  +       + LM+ +  +    I N +     +
Sbjct: 222 LTNLEQFISDIAMSPDGKNLVFTSYTQKGTEQKASIRLMNVKTKKDETIISNGKDFTPLI 281

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
              P+FS +G       +   A  +   D      +  T
Sbjct: 282 DAQPQFSKDGSIIYFMAEAKGAKRL--KDETGRNAKVRT 318


>gi|302758614|ref|XP_002962730.1| hypothetical protein SELMODRAFT_78344 [Selaginella moellendorffii]
 gi|300169591|gb|EFJ36193.1| hypothetical protein SELMODRAFT_78344 [Selaginella moellendorffii]
          Length = 554

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 45/284 (15%), Positives = 87/284 (30%), Gaps = 37/284 (13%)

Query: 141 GKKFFSSPASWRKIAHT--ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           G+ +   PA  +              +  G KG+  +   F     +     +   V   
Sbjct: 224 GRSWVVPPADVKAANDRCFFPKRCIHTWVGHKGNVMTIQFFPKYGHLLLSGSSDHQVKIW 283

Query: 199 DGANIR---YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           D  N R            +    FS +  K    +YD +    + L DT   +       
Sbjct: 284 DVHNHRKCVRTYKGHSATVRHVSFSNDGLKFLSVSYDTK----IKLWDTETGKVISSFTT 339

Query: 256 FRSMILAPRFSSNGKR--ALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPD 312
            ++  +A +   +  +   L+   KD+ +  +  D+ S    +     L    + ++  +
Sbjct: 340 GKTPYVA-KLHPDDDKQNVLMVAMKDKKVVQW--DVDSGKITQEYDQHLDAVNTITFVDN 396

Query: 313 SSQIVFESD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + + +  SD    R  +  + V+       K IS+    S       P G   A      
Sbjct: 397 NRRFITSSDDRSLRVWEFGIPVV------IKYISEPHMHSMPSIAVHPNGKFFAAQSMDN 450

Query: 369 EKFAIGVMKKDGSQERLLVE-------DSNLQAPTWSPSGRSLI 405
               I V   D  +   L +               +SP G+ +I
Sbjct: 451 ---QILVY--DTKERFRLNKKRFHGHVTGLGCQVNFSPDGKYVI 489


>gi|291439965|ref|ZP_06579355.1| WD-repeat protein [Streptomyces ghanaensis ATCC 14672]
 gi|291342860|gb|EFE69816.1| WD-repeat protein [Streptomyces ghanaensis ATCC 14672]
          Length = 1316

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 70/191 (36%), Gaps = 20/191 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP  +  A      +    V L++       + +      I A  FS +G R   S   
Sbjct: 513 FSPEGKAAAI----GQSGGSVLLVNVPDGTPLRTLPWEADWIRAVAFSPDGGRLACS--- 565

Query: 279 DEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           DE   +   DL +N     T+    +    S  +S D  +++F +  + +   + ++   
Sbjct: 566 DEKGRLRVWDLATNLP---TDYPGHDRQTRSLVFSADG-RVLFSAGEDRRILAWSVEPRA 621

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQ 393
           S+  R+    +A  +    +P   LIA    + ++  + +      +E  L        +
Sbjct: 622 SEP-RVLCAIDAEIWGLHGAPASTLIA---AACDEVCVRMWDTATGEEVSLEGRAPVAGR 677

Query: 394 APTWSPSGRSL 404
              +S  GR +
Sbjct: 678 CLRFSTDGRHV 688



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 50/404 (12%), Positives = 129/404 (31%), Gaps = 68/404 (16%)

Query: 14   KINLCLLLVLIGGFFPTSI--HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
            +  +  LL      +  ++  +A  +V    ++   + +    +   D    +   V++ 
Sbjct: 705  RKLVGTLLGHTSSVWAVAVTRNASGEVLITGSHDETIRV----WNIADPSAARCERVINS 760

Query: 72   DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ--VLVTGR------VIKEGKDR 123
             L        +S DS  Q           + W++  A+   ++ G       V      R
Sbjct: 761  -LD--GPVWPVSADSEGQYFATVGRNSTIRFWDTADAECLEVLAGSSGTVLSVASSPDGR 817

Query: 124  LRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            L          RLW+      +   +     A  R +A     ++   +     D++ R+
Sbjct: 818  LLASGGHDRLVRLWNAATGDCLAELR--GHTAGVRAVAFRPQGNV---LATASEDWDVRL 872

Query: 178  LFVSESVVSGIIKNS------------------------LCVMDRDGANIRYLTPSRDQI 213
              +  +  S ++  S                        + + D  G          +  
Sbjct: 873  WDLRTNQPSAVLTGSRNWLWTVAFEPNGHSLAAAGADAVIRIWDIQGRGGVRAFTGHEAR 932

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +   +++ + Q++   +  ++   R++ + +      + +G     + +    ++     
Sbjct: 933  VRAVQYTGDGQRL--VSVGEDGQTRLWQVASGGS---ELLGTVEGHVTSVCVLAD--DLC 985

Query: 274  ISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            ++   D A+ ++  DL S     +        ++   +PD +  +  + ++G   L V  
Sbjct: 986  VTGSSDGALRLW--DLTSRTLLRQARAHEGAVLALLAAPDGNTFL-SAGQDG--HLRVWG 1040

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             +G     +S+    +     W   G   A+   +G   AI   
Sbjct: 1041 RDGLRLHGVSRTAAGTVRSLAWHSDG---AYVAAAGGDEAIRRY 1081



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 20/213 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK-RALISV 276
           RFS +  +  +   DD     + + +T   +    +    S + A   + N     LI+ 
Sbjct: 680 RFSTDG-RHVFVGCDDG---AIRVWNTESRKLVGTLLGHTSSVWAVAVTRNASGEVLITG 735

Query: 277 QKDEAMDIY-SVDLQSNATERLTNTLFINISASY--SPDSSQIVFESDREGKEQLYVMQS 333
             DE + ++   D  +   ER+ N+L       +  S DS    F         +    +
Sbjct: 736 SHDETIRVWNIADPSAARCERVINSL---DGPVWPVSADSEGQYFA-TVGRNSTIRFWDT 791

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSN 391
             ++   +      +      SP G L+A     G    + +           L    + 
Sbjct: 792 ADAECLEVLAGSSGTVLSVASSPDGRLLA---SGGHDRLVRLWNAATGDCLAELRGHTAG 848

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           ++A  + P G  L  + +   D   +L+ +  N
Sbjct: 849 VRAVAFRPQGNVLATASE---DWDVRLWDLRTN 878



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 78/221 (35%), Gaps = 20/221 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V   DG  +R L    D I     FSP+  ++A    D++  LRV+ + T +   P  
Sbjct: 530 LLVNVPDGTPLRTLPWEADWIRAV-AFSPDGGRLA--CSDEKGRLRVWDLATNL---PTD 583

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                    +  FS++G R L S  +D  +  +SV+ +++    L            +P 
Sbjct: 584 YPGHDRQTRSLVFSADG-RVLFSAGEDRRILAWSVEPRASEPRVLCAIDAEIWGLHGAPA 642

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S+ I    D      + +  +   ++  +      +     +S  G  + F         
Sbjct: 643 STLIAAACDE---VCVRMWDTATGEEVSLEGRAPVAGRCLRFSTDGRHV-FVGCDDGAIR 698

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +     +    +L+       +  W+     +  +R   G+
Sbjct: 699 VW----NTESRKLVGTLLGHTSSVWA-----VAVTRNASGE 730


>gi|190896164|gb|ACE96595.1| U5 snRNP-specific protein-like factor [Populus tremula]
          Length = 215

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 71/227 (31%), Gaps = 23/227 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +       + +  ++ +  ++  A+ D      V   D    +  K++    S + + 
Sbjct: 4   FMVMRGHKNAVLDLHWTADGSQIISASPDK----TVRAWDVETGKQIKKMAEHSSFVNSC 59

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S  G   ++S   D    ++  DL+     +     +   + S+S D+S  +F    +
Sbjct: 60  CPSRRGPPLVVSGSDDGTSKLW--DLRQKGAIQTFPDKYQITAVSFS-DASDKIFTGGID 116

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + V      +     +  +        SP G  +  T     K  I  M+    Q 
Sbjct: 117 --NDVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLL-TDGMDNKLCIWDMRPYAPQN 173

Query: 384 RL--LVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           R   + E             +WSP G  +       G     +Y  D
Sbjct: 174 RRVKIFEGHQHNFEKNLLKCSWSPDGSEV-----TAGSADRMVYIWD 215


>gi|167463826|ref|ZP_02328915.1| hypothetical protein Plarl_14914 [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 379

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 24/212 (11%), Positives = 59/212 (27%), Gaps = 20/212 (9%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI--LRVYLMDTRIDRAPKRIGNFR 257
           G+N            F   FSP+++ +       + I    +      +    +   +  
Sbjct: 147 GSNPERQDRPHPHSSF---FSPDERYLFVPDLGIDRICTYTIDSDRHVLQLHGETKTHPG 203

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-------TLFINISASY- 309
           +      F  NG+ A +  + D  +  +     +     +             N  A   
Sbjct: 204 AGPRHMTFHPNGRYAYVINEVDSTITAFRYAANTGELREIATISTIPEEFAGENTCAEIV 263

Query: 310 -SPDSSQIVFESDREGKE-QLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFT 364
            S D  + ++ S+R      +Y +          + +S + E      +  P G  +   
Sbjct: 264 TSRDG-RFLYGSNRGHDSIAVYAINEQTGALTLVEHVSTEGEHPRHFALI-PDGTHMIVA 321

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                      + ++  + +      +   P 
Sbjct: 322 NRDTNNIVTFCVDQETGKLKSTGHSVSTSKPV 353


>gi|163782391|ref|ZP_02177389.1| hypothetical protein HG1285_06375 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882424|gb|EDP75930.1| hypothetical protein HG1285_06375 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 943

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 52/344 (15%), Positives = 97/344 (28%), Gaps = 50/344 (14%)

Query: 116 VIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNS 175
             + G +RL +E R + VK   ++    F             I D +    T   G   +
Sbjct: 206 YQEIGNNRLELEGR-YLVKREGELFTYSFEVRGYDPEYA--LIIDPVLSYSTYI-GGSLT 261

Query: 176 RILFVSESVVSGIIK--NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
            I +      SG          M            +    +F  + SP+   + Y+TY  
Sbjct: 262 DIAYGVAVDPSGNAYLVGKTFSMFFPTKGPFQGANNGHFDVFVSKISPDGNTLVYSTYLG 321

Query: 234 ED----ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS--V 287
            D       + +          + G+       P       +      K  + D++   +
Sbjct: 322 GDDRDEGYSIAVDSAGNAYITGKTGSPFQGDPFPT-----TQGSFQENKKGSFDVFVAKL 376

Query: 288 DLQSNATERLTNTLFINISASY--SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           + + N     T     +    Y  + DS    + + R       V         + S+  
Sbjct: 377 NPEGNDLVYSTYLGGDDRDMGYGIAIDSDGNAYVTGRTESANFPVQN-----PIQNSKGN 431

Query: 346 EASYFDPVWSPQGDLIAFTKFSGE-----KFAIGVMKKDGSQERLLVEDSNLQAPTWS-- 398
               F    +P G  + ++ F G         I V         +    S+   P ++  
Sbjct: 432 FFDAFVTKINPDGSALIYSTFLGGESGDDGRGIAV--DSSGNAYVTGSTSSDNFPKYNPY 489

Query: 399 ---------------PSGRSLIFSRKKDGDTG--SKLYSIDLNG 425
                          P G + I+S    G +       ++D NG
Sbjct: 490 QGIRAANDAFITKIKPDGSAFIYSTYFGGSSQEHGVGVAVDQNG 533


>gi|149639611|ref|XP_001512952.1| PREDICTED: similar to integral membrane serine protease Seprase
           [Ornithorhynchus anatinus]
          Length = 760

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 68/222 (30%), Gaps = 44/222 (19%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA----TERLTNTLFINISASY 309
           G F      P +  +G      + +    +I   ++++         +T         + 
Sbjct: 49  GTFYYKTFFPSW-ISGHE---YLHQSMDNNIILYNVETGEASILLSNITMKHVNATGYAL 104

Query: 310 SPDSSQIVF-ESDREGKEQL------YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           SPD  Q  F ESD     +       Y+      D  R   +         WSP  + +A
Sbjct: 105 SPD-RQFAFLESDYSKLWRYSYTASYYIYDLGNGDFVR-ENELPHPIQYICWSPVENKMA 162

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDS-----NLQAP---------------TWSPSGR 402
           +   +     I + ++ G     +             P                WSP+G+
Sbjct: 163 YVYQN----NIYLKERPGDPSIQITNTGIENQIFNGIPDWVYEEEMLATKYALWWSPNGK 218

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP---AYASDPQ 441
            L ++   D D     YS   + +    IN P   A A +P 
Sbjct: 219 FLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPT 260


>gi|62179353|ref|YP_215770.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|224582598|ref|YP_002636396.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|75484358|sp|Q57RH2|6PGL_SALCH RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|254801254|sp|C0PWX3|6PGL_SALPC RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|62126986|gb|AAX64689.1| putative 3-carboxymuconate cyclase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|224467125|gb|ACN44955.1| hypothetical protein SPC_0781 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322713824|gb|EFZ05395.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
          Length = 331

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/235 (13%), Positives = 71/235 (30%), Gaps = 18/235 (7%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 2   KQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 61

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPD-SSQIVFE-SDREGKEQLYVMQSNGSDQKR 340
            Y +               +  S +  S D   + VF  S   G   + V +        
Sbjct: 62  AYRIAPDDGVLT-FAAESALPGSPTHISTDHHGRFVFVGSYNAGN--VSVTRLQDGLPVE 118

Query: 341 ISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNL 392
           +    E          +P    +       ++  +  +  DG        E   VE +  
Sbjct: 119 LVDVVEGLDGCHSANITPDNRTLWVPALKQDRICLFTLSDDGHLVAQEPAEVNTVEGAGP 178

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
           +   + P+ R   +   +   +       + +G  E   TL   PA  SD +W  
Sbjct: 179 RHMVFHPN-RQYAYCVNELNSSVDVWQLKNPHGEIECVQTLDMMPADFSDTRWAA 232


>gi|32475158|ref|NP_868152.1| 3-carboxymuconate cyclase [Rhodopirellula baltica SH 1]
 gi|32445699|emb|CAD78430.1| conserved hypothetical protein-putative 3-carboxymuconate cyclase
           [Rhodopirellula baltica SH 1]
          Length = 396

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 44/292 (15%), Positives = 85/292 (29%), Gaps = 53/292 (18%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDF------NSRILFVSESVVSGIIKNSLCVMDRDGANI 203
           ++R  A +    + +  + E GD         R   V  S   G    +L  +  DG+  
Sbjct: 105 AYRVQADSTGAKLVEMGSVESGDGGVAHLATDRTGSVLLSAQYGGGSTTLYELAEDGSVK 164

Query: 204 RYLTPSRDQILFEPR---------------F---SPNQQKVAYATYDDEDILRVYLMDTR 245
           R +       L  P                +   SP+  + A+      D + ++ +D  
Sbjct: 165 RRVQVYEHDALLSPAGSGVVGNRQDAPHAHWVGTSPD-NRFAFTPDLGMDKVVIWKLDPN 223

Query: 246 IDRAPKRIGNFRSMILAPR---FSSNGKRAL-------------ISVQKDEAMDIYSVDL 289
                            PR   FS +GKR                  +        +V  
Sbjct: 224 GPSLTHHGFGEGIPGGGPRHMKFSPDGKRIYLLNELALSVTVFDYEAKAGTMTAGQTVPA 283

Query: 290 QS---NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
            S    A ER  +   I +  S      + V+ ++R G + + V + + + Q  + + + 
Sbjct: 284 LSEEIKAKERFNSASEIRVHPS-----GKFVYSANR-GHDSISVFRIDEAGQMELVEVEA 337

Query: 347 ASYFDPV---WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                P      P G  +           +  +  D  +     +   +  P
Sbjct: 338 IRGGWPRNFNLDPSGRWLIAAGRDSHTATVFEIDADTGELTFTRQTQQVPTP 389


>gi|10383804|ref|NP_009997.2| Rsa4p [Saccharomyces cerevisiae S288c]
 gi|32363492|sp|P25382|YCW2_YEAST RecName: Full=WD repeat-containing protein YCR072C
 gi|14588954|emb|CAC42989.1| beta-transducin family (WD-40 repeat) protein [Saccharomyces
           cerevisiae]
 gi|51012783|gb|AAT92685.1| YCR072C [Saccharomyces cerevisiae]
 gi|151943884|gb|EDN62184.1| ribosome assembly [Saccharomyces cerevisiae YJM789]
 gi|190406493|gb|EDV09760.1| hypothetical protein SCRG_05461 [Saccharomyces cerevisiae RM11-1a]
 gi|256270177|gb|EEU05401.1| Rsa4p [Saccharomyces cerevisiae JAY291]
 gi|259145010|emb|CAY78275.1| Rsa4p [Saccharomyces cerevisiae EC1118]
 gi|285810759|tpg|DAA07543.1| TPA: Rsa4p [Saccharomyces cerevisiae S288c]
 gi|323338521|gb|EGA79742.1| Rsa4p [Saccharomyces cerevisiae Vin13]
 gi|323349546|gb|EGA83768.1| Rsa4p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 515

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 73/201 (36%), Gaps = 26/201 (12%)

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           +I          S  + A   + + Y+ I  + G+    ++       +     ++ + +
Sbjct: 335 RIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMV-------TASDDYTMFLWN 387

Query: 198 R-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
                          +++    FSP+ + +  A++D+        +     R  K I  F
Sbjct: 388 PLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNS-------IKLWDGRDGKFISTF 440

Query: 257 RSMILA---PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPD 312
           R  + +     +SS+  R L+S  KD  + ++  D+++      L        +  +S D
Sbjct: 441 RGHVASVYQVAWSSD-CRLLVSCSKDTTLKVW--DVRTRKLSVDLPGHKDEVYTVDWSVD 497

Query: 313 SSQIVFESDREGKEQLYVMQS 333
             ++       GK+++  + +
Sbjct: 498 GKRVC----SGGKDKMVRLWT 514



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 40/299 (13%), Positives = 89/299 (29%), Gaps = 61/299 (20%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  +V+G   N+  + D D     +        +    +SP+ + +A  + D+     + 
Sbjct: 156 SSRMVTGAGDNTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDN----TIR 211

Query: 241 LMDTRIDRA-PKRIGNFRSMILAPRFSSN-----GKR-ALISVQKDEAMDIYSVDLQSNA 293
           L D +  +     +      I +  +        G +  L S  KD  + I+  D  S  
Sbjct: 212 LWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIW--DTVSRV 269

Query: 294 TERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSD----------QKRIS 342
            +   +    ++S   +      +++    +   +++ + S G               +S
Sbjct: 270 CQYTMSGHTNSVSCVKWG--GQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLS 327

Query: 343 QDKEASYFDPVWSPQGDL---------------------------IAFTKFSGEKFAIGV 375
              + +     +   G                             +  T        +  
Sbjct: 328 LSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTASDDYTMFLWN 387

Query: 376 MKKDGSQ-ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
             K      R+      +    +SP GR ++       D   KL+    +GR+   I+T
Sbjct: 388 PLKSTKPIARMTGHQKLVNHVAFSPDGRYIV---SASFDNSIKLW----DGRDGKFIST 439



 Score = 41.2 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 38/124 (30%), Gaps = 11/124 (8%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
               +  +   R+   + ++    FS +G+  + S   D ++ ++         + ++  
Sbjct: 386 WNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIV-SASFDNSIKLW----DGRDGKFISTF 440

Query: 301 LFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                S    ++S D   +V  S       L V               +   +   WS  
Sbjct: 441 RGHVASVYQVAWSSDCRLLVSCSK---DTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVD 497

Query: 358 GDLI 361
           G  +
Sbjct: 498 GKRV 501


>gi|332828820|gb|EGK01512.1| hypothetical protein HMPREF9455_02345 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 409

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 52/169 (30%), Gaps = 20/169 (11%)

Query: 271 RALISVQKDEAM--DIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQIVFE------S 320
             L   +        ++      +    L      +     ++  D   + F        
Sbjct: 240 EILYCQETGGDAPQRMWITKADGSDNRPLFAEDANDWVTHETWV-DRDHVYFNVMGHLPR 298

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
            R+    L+ +     + + + Q    S ++    +  G   A   F GE + I  M   
Sbjct: 299 LRKRPTGLFRINVRTDEVQLLGQLDYGSGFWHCGGTSDGKWGASDNFEGEVYLINSM--- 355

Query: 380 GSQERLLVEDSNLQ----APTWSPSGRSLIFSRKKDGDTG-SKLYSIDL 423
             + +LL  +  ++     P++SP    ++       D     L  I++
Sbjct: 356 TGERKLLTANHRMKPDHTHPSFSPDNTRVLIQSGYLSDGNKLSLMVINI 404



 Score = 37.3 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/75 (14%), Positives = 26/75 (34%), Gaps = 8/75 (10%)

Query: 240 YLMDTRIDRAPKRIGNFRSMI-----LAPRFSSNGKRALISV---QKDEAMDIYSVDLQS 291
            ++DTR       + N            P+++S+G+  +        D+    ++V   +
Sbjct: 33  VMVDTRTGYTITALTNGTYSDAKLYPTHPQWTSDGRYIVFRSSDRSADKHSQAFAVSEAT 92

Query: 292 NATERLTNTLFINIS 306
               +LT+       
Sbjct: 93  GEIIQLTDGEGTGTG 107


>gi|331231078|ref|XP_003328203.1| transcription initiation factor TFIID subunit 5 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
 gi|309307193|gb|EFP83784.1| transcription initiation factor TFIID subunit 5 [Puccinia graminis
           f. sp. tritici CRL 75-36-700-3]
          Length = 762

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 59/194 (30%), Gaps = 36/194 (18%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----------FES 320
           R L+S  +D  + ++S+DL                   + P                + S
Sbjct: 555 RHLLSSSQDSTIRLWSLDL-FKNLVVYRGHREPVWDVEWGPKGIYFASASRDRTARLWCS 613

Query: 321 DREGK-----------------EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +R G                      +         R+    E +      SP G L+A 
Sbjct: 614 ERIGACVKFHPNSLYLATGSSDRTCRLWDVQRGSSVRVFHGHEGAVNCVAISPDGKLLA- 672

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +GE  +I V     S+    +    S++ + ++S     L        D   +++ +
Sbjct: 673 --SAGEDQSIKVWDIGSSRLMKTMRGHQSSIYSLSFSAESTILA---SAGADCSIRVWDV 727

Query: 422 DLNGRNETLINTPA 435
              G    +++ P+
Sbjct: 728 QSMGTTGQILSNPS 741


>gi|226228619|ref|YP_002762725.1| putative peptidase [Gemmatimonas aurantiaca T-27]
 gi|226091810|dbj|BAH40255.1| putative peptidase [Gemmatimonas aurantiaca T-27]
          Length = 911

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 74/257 (28%), Gaps = 47/257 (18%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +++   +      ++  VY ++       K +   R           G +   S    + 
Sbjct: 383 DRKPYPWEWKFGRNVQDVYAVNLETGARSKVLERVRHYYGG---DPTGTKLAWS----DG 435

Query: 282 MDIYSVDLQSNATERLTNT----------LFINISAS----------YSPDSSQIVFESD 321
            D + VDL S     LT +             +   +          +S     ++    
Sbjct: 436 RDYWVVDLASGKRTNLTASVTRGGKADFVDHDDDHPTDIPHIFPIVAWSKQGDALLVNDT 495

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG---------------DLIAFTKF 366
            +    ++ + ++GS   R++          + S  G                  A T  
Sbjct: 496 HD----VWRLAADGSAATRLTNGAREQVAHRLVSAAGFNASVVDRAVDLSAPQYFALTGR 551

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             ++     +  DG+ +RLL+ D+       + S   + F R++   + +     D    
Sbjct: 552 QTKQSGYARLNADGTVQRLLLIDAGHSGFVRADSANVVAFLRQRYDTSPNVFVGADPASA 611

Query: 427 NETLINTPAYASDPQWV 443
                  P  +    W 
Sbjct: 612 KAVTATNPQQSKF-AWG 627


>gi|145528696|ref|XP_001450142.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124417742|emb|CAK82745.1| unnamed protein product [Paramecium tetraurelia]
          Length = 250

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 73/218 (33%), Gaps = 19/218 (8%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR--FSP 221
           +  T +  D+N    +++ S  S     ++ +   DG NI+  T  +       +  F P
Sbjct: 21  ERKTIKSMDWNCNGSYLATSSDS-----TIKIWSFDGNNIKRSTDLKQGSEQLEKLLFHP 75

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
            Q  +  +   +     V + D R  ++ ++    +  +    +S NG    +  ++++ 
Sbjct: 76  TQPDIIASITKE----YVKIWDIRTKQSVRQ--EKKEQMGIACWSPNGNELAVGTKQNKE 129

Query: 282 MDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
             I  +D+Q    + +      + +    +   D    V    + G   +  M  N    
Sbjct: 130 TQIMFLDMQGGERQIMYQPKDKDKNFELKNIMYDKDVFVAVGQQNGVGMIQFMDVNNPQL 189

Query: 339 KRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
             + Q     A      +S  G    +T        + 
Sbjct: 190 PPLHQMEAHRAGITQCKFSKDGQH-MYTGAQDSLIILW 226



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 19/135 (14%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS------YFDPVWSPQGD 359
           S  ++ + S +   SD      + +   +G++ KR +  K+ S       F P   P   
Sbjct: 27  SMDWNCNGSYLATSSDST----IKIWSFDGNNIKRSTDLKQGSEQLEKLLFHPT-QPD-- 79

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                  + E   I  ++   S  +   +   +    WSP+G  L    K++ +T  ++ 
Sbjct: 80  --IIASITKEYVKIWDIRTKQSVRQE--KKEQMGIACWSPNGNELAVGTKQNKET--QIM 133

Query: 420 SIDLNGRNETLINTP 434
            +D+ G    ++  P
Sbjct: 134 FLDMQGGERQIMYQP 148


>gi|120436686|ref|YP_862372.1| hypothetical protein GFO_2340 [Gramella forsetii KT0803]
 gi|117578836|emb|CAL67305.1| conserved hypothetical protein [Gramella forsetii KT0803]
          Length = 822

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 1/75 (1%)

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            S       L V   +G+    ++   EA    +  WSP   +IAFT  + +   + V+ 
Sbjct: 87  NSRARYYNDLKVKPVDGNQPIEVTGLPEAPRLTNFSWSPDESMIAFTHTTDKGVELWVLN 146

Query: 378 KDGSQERLLVEDSNL 392
            + +  + L E +  
Sbjct: 147 IENASAKKLTEGTLN 161



 Score = 43.5 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 74/195 (37%), Gaps = 33/195 (16%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y     + +     ++        R+ NF        +S +      +   D+ ++++ +
Sbjct: 93  YNDLKVKPVDGNQPIEVTGLPEAPRLTNF-------SWSPDESMIAFTHTTDKGVELWVL 145

Query: 288 DLQSNATERLTNT--LFINISA-SYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRI 341
           ++++ + ++LT         S  ++  D+S ++     +DRE K               +
Sbjct: 146 NIENASAKKLTEGTLNANMRSTINWFRDNSALLVTMLPTDRE-KLIDAETSVPTGPTISV 204

Query: 342 SQDKEA---SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--- 395
           S  KEA   +Y D + +P  +   +      + A+  +  DG+        S   AP   
Sbjct: 205 SDGKEAQNRTYQDLLKNPNDE---YNFEQLARSALIKVNLDGT-------TSKWMAPKMY 254

Query: 396 ---TWSPSGRSLIFS 407
              ++SP G+ ++ +
Sbjct: 255 SDISFSPDGKYVMIT 269



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 71/200 (35%), Gaps = 18/200 (9%)

Query: 176 RILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQI-LFEPRFSPNQQKVAYATYDDE 234
           RI  V+         N L V   DG     +T   +   L    +SP++  +A+    D+
Sbjct: 79  RINPVTNINSRARYYNDLKVKPVDGNQPIEVTGLPEAPRLTNFSWSPDESMIAFTHTTDK 138

Query: 235 DI-LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            + L V  ++    +         +M     +  +    L+++   +   +  +D +++ 
Sbjct: 139 GVELWVLNIENASAKKLTEGTLNANMRSTINWFRDNSALLVTMLPTDREKL--IDAETSV 196

Query: 294 TERLTNTLFINISA---SY-----SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
               T ++     A   +Y     +P+     +  ++  +  L  +  +G+  K      
Sbjct: 197 PTGPTISVSDGKEAQNRTYQDLLKNPNDE---YNFEQLARSALIKVNLDGTTSK---WMA 250

Query: 346 EASYFDPVWSPQGDLIAFTK 365
              Y D  +SP G  +  T 
Sbjct: 251 PKMYSDISFSPDGKYVMITN 270


>gi|157110635|ref|XP_001651185.1| vegetatible incompatibility protein HET-E-1, putative [Aedes
           aegypti]
 gi|108878655|gb|EAT42880.1| vegetatible incompatibility protein HET-E-1, putative [Aedes
           aegypti]
          Length = 326

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 64/168 (38%), Gaps = 18/168 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            PNQ ++A  +        VYL D + D   + I    + I     S NG+    +V   
Sbjct: 142 HPNQVELAIGS----QGGSVYLWDVKSDVHEQLIPEVEASIQDIAISPNGQYMA-AVNNK 196

Query: 280 EAMDIYSVDLQSNATERLTN---------TLFINISASYSPDSSQIVFESDREGKEQLYV 330
               I+S+    N+  +LT               +   +SPDSS +V  S  +G  ++Y 
Sbjct: 197 GNCYIWSLSNSINSETQLTQTDPKLRIEAHKKYALRCKFSPDSSLLVTCSG-DGTARIYR 255

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
             +     +   + ++   +D V++     + FT  S     +  ++ 
Sbjct: 256 TDTFQLHAEL--KIEKYWMWDAVFTNDSKYL-FTASSDGHARLWKIET 300


>gi|82541632|ref|XP_725044.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479901|gb|EAA16609.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 291

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 68/205 (33%), Gaps = 14/205 (6%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +       Q + +   S +       ++D+     + L D  +    +      S + +
Sbjct: 32  AKKSLTGHSQAISDVSISSDGLFALSGSWDN----SIRLWDLSLGETIRSFIGHTSDVFS 87

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTNTLFINISASYSPDSSQIVFE 319
             FS + ++ + S  +D+ + +++   Q   +   ++ T+ +       +SP   Q +  
Sbjct: 88  VSFSPDNRQIV-SASRDKTIKLWNTLAQCKYTITEQQHTDWI---TCVRFSPSPKQAIIV 143

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     + + V      D  +  +           SP G L A +        +  +  +
Sbjct: 144 SC-GWDKLVKVWNLKNCDLNKNLEAHTGVLNTVTISPDGSLCA-SGGKDGVAKLWDVN-E 200

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSL 404
           G     L     + +  +SP    L
Sbjct: 201 GKHLYSLETGCTINSLCFSPCDYWL 225


>gi|327404720|ref|YP_004345558.1| Dipeptidyl-peptidase IV [Fluviicola taffensis DSM 16823]
 gi|327320228|gb|AEA44720.1| Dipeptidyl-peptidase IV [Fluviicola taffensis DSM 16823]
          Length = 720

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 37/282 (13%), Positives = 89/282 (31%), Gaps = 60/282 (21%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------------- 264
            FSP++ K+ +      + L VY +    ++     G   S+I                 
Sbjct: 145 TFSPDETKLGFVA---GNNLFVYDLVNNAEKQITFDGRLNSIINGTTDWVYEEEFAITQG 201

Query: 265 --FSSNGKRALISVQKDEAMDIYSV---------------DLQSNATERLTNTLFINISA 307
             +S + K        +  +  + +                    A  +++  +    +A
Sbjct: 202 FEWSPDSKYLAFMRFDEMHVKQFQMAMYGNLYPEEYTFKYPKAGEANSKVSFHIANVETA 261

Query: 308 S----------------YSPDSSQIVFESD---REGKEQLYVMQSNGSDQKRISQDKEAS 348
           +                +SP     VF S     +   + +++ +  +   RI  ++ + 
Sbjct: 262 TIKGAMLGDFEYLPRFQWSPT-KNEVFVSTLNRHQSTVKYHLITNPETPTDRIFFEESSD 320

Query: 349 YF----DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS- 403
            +    + +    G  +  T        I  +  DG   ++   + ++    +    +  
Sbjct: 321 TYLDADNVILLKDGTSMLRTSEKDGYNHIYHLTFDGKLSQVTTGNWDVMD-LYGIDEKKG 379

Query: 404 -LIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
            + +S  ++G     LYSI L G  + LI+      D ++  
Sbjct: 380 TVFYSSSENGAMNKTLYSIQLKGTGKKLISEATGYHDAEFAP 421



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 27/126 (21%)

Query: 265 FSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
            S +GK  LI        +   +   Y+ +++     ++  T       ++SPD +++ F
Sbjct: 96  LSKSGKWLLIQSNTKSIYRHSYSTTYYAYNIEKKEIRKIHATNQQQTLGTFSPDETKLGF 155

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYF-----------------DPVWSPQGDLI 361
            +       L+V     + +K+I+ D   +                      WSP    +
Sbjct: 156 VA----GNNLFVYDLVNNAEKQITFDGRLNSIINGTTDWVYEEEFAITQGFEWSPDSKYL 211

Query: 362 AFTKFS 367
           AF +F 
Sbjct: 212 AFMRFD 217



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 69/184 (37%), Gaps = 16/184 (8%)

Query: 215 FEPR--FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-----APRFSS 267
           + PR  +SP + +V  +T +       Y + T  +    RI    S              
Sbjct: 273 YLPRFQWSPTKNEVFVSTLNRHQSTVKYHLITNPETPTDRIFFEESSDTYLDADNVILLK 332

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ--IVFESDREG- 324
           +G   L + +KD    IY +        ++T     ++   Y  D  +  + + S   G 
Sbjct: 333 DGTSMLRTSEKDGYNHIYHLTFDGK-LSQVTTGN-WDVMDLYGIDEKKGTVFYSSSENGA 390

Query: 325 -KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG-VMKKDGSQ 382
             + LY +Q  G+ +K IS+     Y D  ++P  +    T  S     I  +  ++G  
Sbjct: 391 MNKTLYSIQLKGTGKKLISEAT--GYHDAEFAPGFNYFIQTSSSANTVPIYSLCDRNGKT 448

Query: 383 ERLL 386
            ++L
Sbjct: 449 LQVL 452


>gi|319952476|ref|YP_004163743.1| dipeptidyl-peptidase iv [Cellulophaga algicola DSM 14237]
 gi|319421136|gb|ADV48245.1| Dipeptidyl-peptidase IV [Cellulophaga algicola DSM 14237]
          Length = 721

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/276 (11%), Positives = 94/276 (34%), Gaps = 55/276 (19%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDD-------EDILRVYLMDTRIDRAPKRIGNF-----R 257
            +  + EP  SP+  KVAY   ++       ++       D   ++    + ++      
Sbjct: 136 SENKIQEPTLSPDNTKVAYVFENNIYIFDISKNTTAKITKDGVKNKIINGVTDWVYEEEF 195

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-------------------- 297
           + + A  ++++G +       +  +  +S+D+      +                     
Sbjct: 196 AFVRAFDWNADGSKIAFLRFDETNVPEFSMDVYGTELYQTQQVFKYPKAGEDNAIVSLHM 255

Query: 298 ----TNTLFINISAS--------YSPDSSQIVFE--SDREGKEQLYVMQSNGSDQKRISQ 343
               ++ +      S        +  D++ +  +  +  +    LY + +  +    + +
Sbjct: 256 LDVKSSEISNVALPSSYYIPRIKWMNDANLLSVQTLNRHQDNLTLYAINAKNNKVSVLLE 315

Query: 344 DKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           +K+A+Y D      +      I +T        I +  ++G     + + S  +  ++  
Sbjct: 316 EKDAAYVDVTDNLTFLADDSFI-WTSEKDGFNHIYLYNENGKLMNQITKGS-WEVTSYYG 373

Query: 400 ---SGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
                  + +   ++G     +YSID  G+N+  + 
Sbjct: 374 YDQDEDRVYYQSTENGSINRGVYSIDSKGKNKRKLA 409



 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 49/326 (15%), Positives = 107/326 (32%), Gaps = 38/326 (11%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWR----KIAHTISDDIYQSITGEKGDFNSRILFVSES 183
           + ++DVK  K I   +      +      K+A+   ++IY     +          V   
Sbjct: 122 YYIFDVKSGKTIKISENKIQEPTLSPDNTKVAYVFENNIYIFDISKNTTAKITKDGVKNK 181

Query: 184 VVSGIIKNSL---------CVMDRDGANIRYLTPSRDQILFEPRFSPN--------QQKV 226
           +++G+                 + DG+ I +L   R      P FS +         Q+V
Sbjct: 182 IINGVTDWVYEEEFAFVRAFDWNADGSKIAFL---RFDETNVPEFSMDVYGTELYQTQQV 238

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALISV--QKDEAM 282
                  ED   V L    +  +        S    PR  + ++     +    +  + +
Sbjct: 239 FKYPKAGEDNAIVSLHMLDVKSSEISNVALPSSYYIPRIKWMNDANLLSVQTLNRHQDNL 298

Query: 283 DIYSVDLQSNATERLT---NTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            +Y+++ ++N    L    +  ++++  + ++  D    ++ S+++G   +Y+   NG  
Sbjct: 299 TLYAINAKNNKVSVLLEEKDAAYVDVTDNLTFLAD-DSFIWTSEKDGFNHIYLYNENGKL 357

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD--GSQERLLVEDSNLQAP 395
             +I++          +    D + +          GV   D  G  +R L         
Sbjct: 358 MNQITKGSWEVTSYYGYDQDEDRVYYQSTENGSINRGVYSIDSKGKNKRKLAIKDGQNNA 417

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +S       F            YS+
Sbjct: 418 DFSAD--FTYFINNFSNTNTPSEYSL 441


>gi|307181868|gb|EFN69308.1| Tubby-related protein 4 [Camponotus floridanus]
          Length = 1363

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 45/124 (36%), Gaps = 7/124 (5%)

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
           D  G   +++ + +G     +  D+        WS  G  +A   +      +G +    
Sbjct: 105 DSSGVIFVWI-KYDGRWSIELINDRSTPVTHFSWSHDGR-MALICYRDGFVLVGSVAGQR 162

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
               +L + + +    W+P  + + F     G T  +L  +D++G   + +   A  +  
Sbjct: 163 YWSSMLNDKATITCGIWTPDDQQVYF-----GTTAGQLIVMDVHGAMVSEVQLAAGVTSM 217

Query: 441 QWVG 444
            W  
Sbjct: 218 AWSA 221



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 57/166 (34%), Gaps = 24/166 (14%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +   V +     +    + L++ R       + +F        +S +G+ ALI   +D  
Sbjct: 105 DSSGVIFVWIKYDGRWSIELINDRSTP----VTHF-------SWSHDGRMALICY-RDGF 152

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + + SV         + N         ++PD  Q+ F +      QL VM  +G+    +
Sbjct: 153 VLVGSV-AGQRYWSSMLNDKATITCGIWTPDDQQVYFGTTAG---QLIVMDVHGAMVSEV 208

Query: 342 SQDKEASYFDPVWSPQGDLIA------FTKFSGEKFAIGVMKKDGS 381
                A      WS +   +        ++     + + V   DG+
Sbjct: 209 QLA--AGVTSMAWSAKKFTMEEDETCDRSQKDDRNYVLAVCLADGN 252



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 21/175 (12%), Positives = 53/175 (30%), Gaps = 29/175 (16%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           +  DG     L   R   +    +S + +       D      V +      R    + N
Sbjct: 114 IKYDGRWSIELINDRSTPVTHFSWSHDGRMALICYRDG----FVLVGSVAGQRYWSSMLN 169

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN--ATERLTNTLFINISASYSPDS 313
            ++ I    ++ + ++            +  +D+     +  +L   +    S ++S   
Sbjct: 170 DKATITCGIWTPDDQQVYFGTTAG---QLIVMDVHGAMVSEVQLAAGV---TSMAWSAKK 223

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                          + M+ + +  +  SQ  + +Y   V    G+++    F  
Sbjct: 224 ---------------FTMEEDETCDR--SQKDDRNYVLAVCLADGNIVMLRSFDD 261


>gi|86360239|ref|YP_472128.1| adenylate cyclase protein [Rhizobium etli CFN 42]
 gi|86284341|gb|ABC93401.1| adenylate cyclase protein [Rhizobium etli CFN 42]
          Length = 624

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 52/133 (39%), Gaps = 14/133 (10%)

Query: 22  VLIGGFFPTSIHAFVKVATNSANYSPV---SIAFTKFVSIDELGGK--VSEVVSKDL--- 73
           V    +        V +       +PV   S+A   F +I     +   S+ +++DL   
Sbjct: 170 VYFADWGNAPSSEEVPLTAGGHTRAPVNKPSVAVLPFANISNDPEQDFFSDGITEDLITD 229

Query: 74  --QRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLW 131
               S +F ++S+++        +++ R      LG   +V G V K G +++R+   L 
Sbjct: 230 LSNVSGLF-VLSRNTVFTWKGRSENLQRIAA--ELGVAYIVEGSVRKAG-NQVRINAELI 285

Query: 132 DVKDRKQIIGKKF 144
           +      +   ++
Sbjct: 286 EAASDGHVWAARY 298


>gi|328350786|emb|CCA37186.1| WD repeat-containing protein YCR072C [Pichia pastoris CBS 7435]
          Length = 723

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 48/346 (13%), Positives = 93/346 (26%), Gaps = 74/346 (21%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
            W+ LG  V+ TG +            RLWD    K I          + +     +S  
Sbjct: 187 AWSPLG-DVIATGSMDNT--------VRLWDPISGKPIG--------DALKGHGKWVSSL 229

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
            ++ I   K     R+        SG    ++ V D    N  Y        +   ++S 
Sbjct: 230 SWEPIHLVKVGSRPRL-------CSGSKDGTVKVWDTVARNAMYTMSGHSSSVACVKWS- 281

Query: 222 NQQKVAYATYDDE----------------DILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
               V Y+   D+                    +  +    D   +         +    
Sbjct: 282 -GSGVIYSGSHDKTIKGWREGRCVATFRAHAHWINHLALSTDFTMRVGEFQPGPSMTVNG 340

Query: 266 SSNG------------------------KRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           + +G                           +++   D  M ++  ++      R+T   
Sbjct: 341 NPSGAVTESSKAKVQEAFDKVSKIGGRYSERMVTASDDFTMYLWEPEVSDKPICRMTGHQ 400

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
            +    S+SPD   IV  S       + +            +   +  +   WS    L+
Sbjct: 401 KLVNHVSFSPDGRYIVSASF---DNSVKLWDGRDGKFIATLRGHVSPVYQTAWSSDCRLL 457

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
                      + V      +  + +     +  T  WS  G+ +I
Sbjct: 458 VSCSKDTT---LKVWDIRTKKLMVDLPGHADEVYTVDWSVDGKKVI 500


>gi|284167154|ref|YP_003405432.1| hypothetical protein Htur_3901 [Haloterrigena turkmenica DSM 5511]
 gi|284016809|gb|ADB62759.1| hypothetical protein Htur_3901 [Haloterrigena turkmenica DSM 5511]
          Length = 394

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 6/66 (9%)

Query: 283 DIYSVDLQSNATERLTNTLFIN------ISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           D Y+         RLT+    +          +  D  +++  SDR+G +QLY +     
Sbjct: 20  DRYADPETGARVTRLTSDSNADSRHLYFTEPGWYDDGRKLLVRSDRDGTQQLYSIALESG 79

Query: 337 DQKRIS 342
           +  +++
Sbjct: 80  EITQLT 85



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 6/66 (9%)

Query: 243 DTRIDRAPKRIGNFRSMIL------APRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           D        R+ +  +          P +  +G++ L+   +D    +YS+ L+S    +
Sbjct: 24  DPETGARVTRLTSDSNADSRHLYFTEPGWYDDGRKLLVRSDRDGTQQLYSIALESGEITQ 83

Query: 297 LTNTLF 302
           LT+   
Sbjct: 84  LTDLPA 89


>gi|256393006|ref|YP_003114570.1| hypothetical protein Caci_3830 [Catenulispora acidiphila DSM 44928]
 gi|256359232|gb|ACU72729.1| WD-40 repeat protein [Catenulispora acidiphila DSM 44928]
          Length = 709

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 46/234 (19%), Positives = 84/234 (35%), Gaps = 28/234 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM------ILAPRFSSN-GK 270
            FS   + +   +  +     V + D       K+IG+  S       + +  FS   G+
Sbjct: 408 TFSRTGRNLLAVSDQNG---AVVVWDADDFTQLKQIGSRFSAKGPAYGVYSLAFSPLPGR 464

Query: 271 RALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISASYSPDSSQIVFESDREGKE 326
           + L +      + ++  DL    T RL    ++      S ++S D S +   S  +G  
Sbjct: 465 QILAAGTSGGQILLW--DLAGPTTPRLLKEVSSGSGDGCSVAFSTDGSMLASASQ-QGFV 521

Query: 327 QLYVM--QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
            L+V     N           + +    V+SP   L+A   +        +     S  R
Sbjct: 522 SLWVTGDPDNVYSAGSDITGHDGAVNTAVFSPHPYLVASGGYDDTVRLWDISDP--SLPR 579

Query: 385 LLV----EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            L      D  +++  +SP GR+L  + K+ G    +LY +      + L   P
Sbjct: 580 QLSLIKGADGPVRSLAFSPDGRTLA-AGKQSG--IVRLYGVTTPSAPKMLDPLP 630



 Score = 43.5 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 57/172 (33%), Gaps = 11/172 (6%)

Query: 204 RYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           R+        ++   FSP   +++  A      IL   L      R  K + +      +
Sbjct: 443 RFSAKGPAYGVYSLAFSPLPGRQILAAGTSGGQILLWDLAGPTTPRLLKEVSSGSGDGCS 502

Query: 263 PRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             FS++G     S  +   + ++     D   +A   +T       +A +SP        
Sbjct: 503 VAFSTDGSMLA-SASQQGFVSLWVTGDPDNVYSAGSDITGHDGAVNTAVFSP---HPYLV 558

Query: 320 SDREGKEQLYVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           +     + + +   +     R   + +  +       +SP G  +A  K SG
Sbjct: 559 ASGGYDDTVRLWDISDPSLPRQLSLIKGADGPVRSLAFSPDGRTLAAGKQSG 610


>gi|239931593|ref|ZP_04688546.1| WD repeat-containing protein [Streptomyces ghanaensis ATCC 14672]
          Length = 1268

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 70/191 (36%), Gaps = 20/191 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FSP  +  A      +    V L++       + +      I A  FS +G R   S   
Sbjct: 465 FSPEGKAAAI----GQSGGSVLLVNVPDGTPLRTLPWEADWIRAVAFSPDGGRLACS--- 517

Query: 279 DEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           DE   +   DL +N     T+    +    S  +S D  +++F +  + +   + ++   
Sbjct: 518 DEKGRLRVWDLATNLP---TDYPGHDRQTRSLVFSADG-RVLFSAGEDRRILAWSVEPRA 573

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQ 393
           S+  R+    +A  +    +P   LIA    + ++  + +      +E  L        +
Sbjct: 574 SEP-RVLCAIDAEIWGLHGAPASTLIA---AACDEVCVRMWDTATGEEVSLEGRAPVAGR 629

Query: 394 APTWSPSGRSL 404
              +S  GR +
Sbjct: 630 CLRFSTDGRHV 640



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 50/404 (12%), Positives = 129/404 (31%), Gaps = 68/404 (16%)

Query: 14   KINLCLLLVLIGGFFPTSI--HAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVSK 71
            +  +  LL      +  ++  +A  +V    ++   + +    +   D    +   V++ 
Sbjct: 657  RKLVGTLLGHTSSVWAVAVTRNASGEVLITGSHDETIRV----WNIADPSAARCERVINS 712

Query: 72   DLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQ--VLVTGR------VIKEGKDR 123
             L        +S DS  Q           + W++  A+   ++ G       V      R
Sbjct: 713  -LD--GPVWPVSADSEGQYFATVGRNSTIRFWDTADAECLEVLAGSSGTVLSVASSPDGR 769

Query: 124  LRVE------FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRI 177
            L          RLW+      +   +     A  R +A     ++   +     D++ R+
Sbjct: 770  LLASGGHDRLVRLWNAATGDCLAELR--GHTAGVRAVAFRPQGNV---LATASEDWDVRL 824

Query: 178  LFVSESVVSGIIKNS------------------------LCVMDRDGANIRYLTPSRDQI 213
              +  +  S ++  S                        + + D  G          +  
Sbjct: 825  WDLRTNQPSAVLTGSRNWLWTVAFEPNGHSLAAAGADAVIRIWDIQGRGGVRAFTGHEAR 884

Query: 214  LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +   +++ + Q++   +  ++   R++ + +      + +G     + +    ++     
Sbjct: 885  VRAVQYTGDGQRL--VSVGEDGQTRLWQVASGGS---ELLGTVEGHVTSVCVLAD--DLC 937

Query: 274  ISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
            ++   D A+ ++  DL S     +        ++   +PD +  +  + ++G   L V  
Sbjct: 938  VTGSSDGALRLW--DLTSRTLLRQARAHEGAVLALLAAPDGNTFL-SAGQDG--HLRVWG 992

Query: 333  SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
             +G     +S+    +     W   G   A+   +G   AI   
Sbjct: 993  RDGLRLHGVSRTAAGTVRSLAWHSDG---AYVAAAGGDEAIRRY 1033



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 72/213 (33%), Gaps = 20/213 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK-RALISV 276
           RFS +  +  +   DD     + + +T   +    +    S + A   + N     LI+ 
Sbjct: 632 RFSTDG-RHVFVGCDDG---AIRVWNTESRKLVGTLLGHTSSVWAVAVTRNASGEVLITG 687

Query: 277 QKDEAMDIY-SVDLQSNATERLTNTLFINISASY--SPDSSQIVFESDREGKEQLYVMQS 333
             DE + ++   D  +   ER+ N+L       +  S DS    F         +    +
Sbjct: 688 SHDETIRVWNIADPSAARCERVINSL---DGPVWPVSADSEGQYFA-TVGRNSTIRFWDT 743

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--ERLLVEDSN 391
             ++   +      +      SP G L+A     G    + +           L    + 
Sbjct: 744 ADAECLEVLAGSSGTVLSVASSPDGRLLA---SGGHDRLVRLWNAATGDCLAELRGHTAG 800

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           ++A  + P G  L  + +   D   +L+ +  N
Sbjct: 801 VRAVAFRPQGNVLATASE---DWDVRLWDLRTN 830



 Score = 40.8 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 78/221 (35%), Gaps = 20/221 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           L V   DG  +R L    D I     FSP+  ++A    D++  LRV+ + T +   P  
Sbjct: 482 LLVNVPDGTPLRTLPWEADWIRAV-AFSPDGGRLA--CSDEKGRLRVWDLATNL---PTD 535

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                    +  FS++G R L S  +D  +  +SV+ +++    L            +P 
Sbjct: 536 YPGHDRQTRSLVFSADG-RVLFSAGEDRRILAWSVEPRASEPRVLCAIDAEIWGLHGAPA 594

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S+ I    D      + +  +   ++  +      +     +S  G  + F         
Sbjct: 595 STLIAAACDE---VCVRMWDTATGEEVSLEGRAPVAGRCLRFSTDGRHV-FVGCDDGAIR 650

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +     +    +L+       +  W+     +  +R   G+
Sbjct: 651 VW----NTESRKLVGTLLGHTSSVWA-----VAVTRNASGE 682


>gi|262196387|ref|YP_003267596.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haliangium ochraceum DSM 14365]
 gi|262079734|gb|ACY15703.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Haliangium ochraceum DSM 14365]
          Length = 924

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 28/83 (33%), Gaps = 3/83 (3%)

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQERLLVEDSNLQAPT 396
           R     +        SP G  IAF K       + V+       S   L   +  L    
Sbjct: 50  RELFFGDPLITASQISPDGRFIAFIKPYRGVRNLWVVATGEDFDSARPLSANERALDGYF 109

Query: 397 WSPSGRSLIFSRKKDGDTGSKLY 419
           WS  G+ L+F +   GD    +Y
Sbjct: 110 WSCDGQHLLFVKDSGGDENYHVY 132



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 30/208 (14%), Positives = 61/208 (29%), Gaps = 33/208 (15%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLT-NTLFINI 305
           + +     +I A + S +G+            +++ V    D  S     L+ N   ++ 
Sbjct: 50  RELFFGDPLITASQISPDGRFIAFIKPYRGVRNLWVVATGEDFDS--ARPLSANERALDG 107

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-------------YFDP 352
              +S D   ++F  D  G E  +V       +        A+                P
Sbjct: 108 Y-FWSCDGQHLLFVKDSGGDENYHVYAVAPEAEAEAETGVPAARDLTDIEGVRAIILDVP 166

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
              P   ++           +  +     +  L+ E+            R+  F+   D 
Sbjct: 167 KNHPGALIVGLNDRDPSLHDVYRVDIATGERTLVYEN------------RAGAFAIGFDS 214

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDP 440
           D G +L    L   ++ L+        P
Sbjct: 215 DGGLRLAMRQLPDGSQELLRVDGDTLTP 242



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 32/242 (13%), Positives = 81/242 (33%), Gaps = 24/242 (9%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID-RAPKRIGNFRSMILAPRFSSN 268
            D ++   + SP+ + +A+       +  ++++ T  D  + + +      +    +S +
Sbjct: 55  GDPLITASQISPDGRFIAFIK-PYRGVRNLWVVATGEDFDSARPLSANERALDGYFWSCD 113

Query: 269 GKRALISVQKDEAMDIYSV--------DLQSN--ATERLTNTLF----INISASYSPDSS 314
           G+  L         + +          + ++   A   LT+       I       P  +
Sbjct: 114 GQHLLFVKDSGGDENYHVYAVAPEAEAEAETGVPAARDLTDIEGVRAIILDVPKNHP-GA 172

Query: 315 QIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            IV  +DR+     +Y +     ++  + +++  ++     S  G  +A  +       +
Sbjct: 173 LIVGLNDRDPSLHDVYRVDIATGERTLVYENRAGAFAIGFDSDGGLRLAMRQLPDGSQEL 232

Query: 374 GVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSK-LYSIDLNGRNET 429
             ++ DG     +      +  T       G     S  +  D   + L  +DL      
Sbjct: 233 --LRVDGDTLTPIYHTKVEETATPLHVLGDGSRAYISTNRGDDVDLQRLMLLDLATGETE 290

Query: 430 LI 431
           L+
Sbjct: 291 LV 292


>gi|226294525|gb|EEH49945.1| eukaryotic translation initiation factor 2A [Paracoccidioides
           brasiliensis Pb18]
          Length = 754

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 60/165 (36%), Gaps = 17/165 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++  S   + +L ++   G     +   ++  + +  +SPN ++          ++  
Sbjct: 247 VDKTGKSYYGETTLYLLSASGGFDSRIDLDKEGPIHDVTWSPNSKEF--------GVVYG 298

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           Y+         + +    S  LAPR    FS NG+  +++   + A  +   DL      
Sbjct: 299 YMPAKTTIFNTRAVATH-SFALAPRNTIIFSPNGRFVIVAGFGNLAGQMDIYDLH-KDCH 356

Query: 296 RLTNTLFINIS-ASYSPDSSQI--VFESDREGKEQLYVMQSNGSD 337
           ++T     N S   +SPD   I     S R   +    +   G  
Sbjct: 357 KVTTIEASNASVCEWSPDEKFILTATTSPRLRVDNGVRIWHVGGG 401



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 17/128 (13%)

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-- 381
           G+  LY++ ++G    RI  DKE    D  WSP                 G M    +  
Sbjct: 256 GETTLYLLSASGGFDSRIDLDKEGPIHDVTWSPNSKEFGVV--------YGYMPAKTTIF 307

Query: 382 QERLLVEDSNLQAPT----WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI-NTPAY 436
             R +   S   AP     +SP+GR +I +   +      +Y +  +    T I  + A 
Sbjct: 308 NTRAVATHSFALAPRNTIIFSPNGRFVIVAGFGNLAGQMDIYDLHKDCHKVTTIEASNAS 367

Query: 437 ASDPQWVG 444
             +  W  
Sbjct: 368 VCE--WSP 373



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 71/212 (33%), Gaps = 23/212 (10%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRALISVQKD------ 279
            +          V + +     +P    NF +   +  ++++ G   ++  Q D      
Sbjct: 193 VFIPERKGMPASVKVFNVPQFNSPVSQKNFFKGDKVQLKWNNTGTSVIVLAQTDVDKTGK 252

Query: 280 ---EAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQI-VFESDREGKEQLYVMQSN 334
                  +Y +        R+  +        ++SP+S +  V       K  ++  ++ 
Sbjct: 253 SYYGETTLYLLSASGGFDSRIDLDKEGPIHDVTWSPNSKEFGVVYGYMPAKTTIFNTRAV 312

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNL 392
            +    +     A     ++SP G  +    F     +  I  + KD  +    +E SN 
Sbjct: 313 ATHSFAL-----APRNTIIFSPNGRFVIVAGFGNLAGQMDIYDLHKDCHKVT-TIEASNA 366

Query: 393 QAPTWSPSGRSLIFSRKKDG---DTGSKLYSI 421
               WSP  + ++ +        D G +++ +
Sbjct: 367 SVCEWSPDEKFILTATTSPRLRVDNGVRIWHV 398


>gi|241955709|ref|XP_002420575.1| dipeptidyl aminopeptidase, putative [Candida dubliniensis CD36]
 gi|223643917|emb|CAX41654.1| dipeptidyl aminopeptidase, putative [Candida dubliniensis CD36]
          Length = 839

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 37/243 (15%), Positives = 77/243 (31%), Gaps = 43/243 (17%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD--RDGANIRYLTPSRDQILFEPRFSP 221
           QSI+        R  + S S  S   K  + +     D   +     S   I        
Sbjct: 62  QSISSIDNFKGERPDYASPSSKSTDFKGKIPLSKEVYDKHILSPKLHSIQWIRAPESIHN 121

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN-----FRSMI------LAPRFSSNGK 270
           ++          +   RV +     +   K +       ++          A   S + +
Sbjct: 122 DRGTYVIKEDKHDKGFRVVVKSIADEEYEKELIGNSTFKYKGQEHEIIDYFA---SPDLQ 178

Query: 271 RALISV------QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           + ++        +       + +D+ +   + + N +    +AS+SPDS +I F  +   
Sbjct: 179 KVILKTDVTSLWRYSSIAQYWVLDINNGDIKPVFNEVDKISTASWSPDSLKIAFIYE--- 235

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPV-----------------WSPQGDLIAFTKFS 367
              LY      ++  +I+ D     F+                   WSP+ D +AF + +
Sbjct: 236 -NNLYYKSLQSNEIIQITFDGSTEIFNGKPDWVYEEEVYGSDHVFWWSPESDKVAFLRSN 294

Query: 368 GEK 370
             +
Sbjct: 295 NTQ 297


>gi|196007656|ref|XP_002113694.1| hypothetical protein TRIADDRAFT_63315 [Trichoplax adhaerens]
 gi|190584098|gb|EDV24168.1| hypothetical protein TRIADDRAFT_63315 [Trichoplax adhaerens]
          Length = 461

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/205 (15%), Positives = 74/205 (36%), Gaps = 14/205 (6%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           ++   ++SP+ Q +         +++V+ ++        +I    + + +  FS + +  
Sbjct: 50  VIEHIQWSPDSQLIL-CGMYKRSLIQVWSLNQPEWTC--KIDEGAAGLQSAVFSPDSRHI 106

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFIN-ISASYSPDSSQIVFESDREGKEQLYVM 331
           L + +    + ++S  L + +   L     I   S +++ D   +     R+ K+ + ++
Sbjct: 107 LSTAEFSLRITVWS--LVNKSVSYLKFPKSIPKGSINFTSDGCYMALAERRDCKDHISIL 164

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                +  +  Q          WS  G  I     S   + + +   DG    L+   + 
Sbjct: 165 ACKSWNLLKNFQIDTNDMAGLAWSSNG-HILCVWDSVLDYKVLLYSLDGRP--LMSYSAY 221

Query: 392 LQ-----APTWSPSGRSLIFSRKKD 411
                  +  WSPSG+ L       
Sbjct: 222 DNALGIKSVAWSPSGQFLSIGSYDQ 246


>gi|126662455|ref|ZP_01733454.1| dipeptidyl aminopeptidase IV [Flavobacteria bacterium BAL38]
 gi|126625834|gb|EAZ96523.1| dipeptidyl aminopeptidase IV [Flavobacteria bacterium BAL38]
          Length = 723

 Score = 45.0 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 55/127 (43%), Gaps = 8/127 (6%)

Query: 281 AMDIYSVDLQSNATERLTN---TLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +D++ VD  S  T+ + N     ++++  + ++  D+S  ++ S+++G   +Y    +G
Sbjct: 298 NLDLHFVDANSGVTKIVLNEKDGAYVDVTDNLTFLKDNS-FIWTSEKDGFNHIYHYDKSG 356

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNLQ 393
             +K+I+           +  +   + +           +  +K DG  +  L   +   
Sbjct: 357 KLKKQITNGNWEVTAYYGFDEKAGTVYYQSVENGSINRDVYAIKIDGKSKTRLSSKAGTN 416

Query: 394 APTWSPS 400
           + T+SP+
Sbjct: 417 SATFSPN 423



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 40/302 (13%), Positives = 105/302 (34%), Gaps = 59/302 (19%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYA---TYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           + ++      + EP FS +  K+ YA        DI+    +    D     I N  +  
Sbjct: 129 KQVSKFTSNQIQEPTFSADGTKICYAFENNLYVHDIISSATIQITQDGKKNHIINGITDW 188

Query: 261 L---------APRFSSNGKRALI-------------------------------SVQKDE 280
           +         A  ++  G +                                  + +K+ 
Sbjct: 189 VYEEEFAFVKAYDWNVTGTKVAYIKFDETEVPEFSMDMYNEGLYPTQTVFKYPKAGEKNA 248

Query: 281 AMDIYSVDLQSNATERLTNTLFINIS-AS--YSPDSSQI-VFESDREGKE-QLYVMQSNG 335
            + ++  DL+S  T+++    + +       ++ D++ + V   +R      L+ + +N 
Sbjct: 249 IVSLHIFDLKSGTTKKINLGDYKDFYIPRIKWTNDAAVLSVQVMNRHQNNLDLHFVDANS 308

Query: 336 SDQKRISQDKEASYFDPV----WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              K +  +K+ +Y D      +      I +T        I    K G  ++ +   + 
Sbjct: 309 GVTKIVLNEKDGAYVDVTDNLTFLKDNSFI-WTSEKDGFNHIYHYDKSGKLKKQITNGNW 367

Query: 392 LQAPTWSPSGR--SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG----F 445
                +    +  ++ +   ++G     +Y+I ++G+++T +++ A  +   +      F
Sbjct: 368 EVTAYYGFDEKAGTVYYQSVENGSINRDVYAIKIDGKSKTRLSSKAGTNSATFSPNFQFF 427

Query: 446 MD 447
           ++
Sbjct: 428 IN 429


>gi|316969005|gb|EFV53175.1| actin-interacting protein 1 [Trichinella spiralis]
          Length = 696

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 35/238 (14%), Positives = 83/238 (34%), Gaps = 21/238 (8%)

Query: 195 VMDRDGANIRY--LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           V+ RD  N +   +      +    ++SPN   +A  + D    +R++    +     K 
Sbjct: 112 VVIRDLENPKISDVYTEHSTLTTVAKYSPNGAYIA--SGDKSGKIRIWDTTQKEHILKKE 169

Query: 253 IGNFRSMILAPRFSSNGKRALISVQ-KDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                  +    +S +G+R  +    +++   ++  +  ++       T  +N S  + P
Sbjct: 170 YQPLPGAVRDIGWSEDGQRLAVVGDGREKFGHVFLFETGTSNGTLCGQTKALN-SVDFRP 228

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                +  +  +    ++         K ++ +         ++P G L A     G+ F
Sbjct: 229 VKPLRIVCASEDNSTAIFEGPP--FKFKTLNYNHSRFAQCVRYAPDGQLFASCGADGKVF 286

Query: 372 AIGVMKKDGSQERLLVE--------DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                  +GS  +  V+        D +  A +W   G  L+ +     D   K++ +
Sbjct: 287 VYE--GLEGSVVKEFVDPACKGKAHDGSAYALSWKSDGSQLLTAS---ADKTCKIWDV 339


>gi|225430549|ref|XP_002285591.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296082169|emb|CBI21174.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 86/287 (29%), Gaps = 34/287 (11%)

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ 138
           F+LI + S        +++     W+   A  ++   V + G         L  +  +++
Sbjct: 350 FSLIDKKSL-----KVENVMDLS-WSP--ADPILALFVPELGGGNQPARVSLVQIPSKEE 401

Query: 139 IIGKKFFSSPA---SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCV 195
           +  K  FS       W+     ++  + +    +K  +    LF  +     I    L  
Sbjct: 402 LRQKNLFSVSDCKMYWQSNGDYLAVKVDRYTKTKKSTYTGFELFRIKERDIPIEVLEL-- 459

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDTRIDRAPKR 252
                        +++  +    + P   + A    D              +   R  K 
Sbjct: 460 ------------ENKNDKIIAFAWEPKGHRFAVIHGDSPRPDVSFYTMRSGSNTGRVSKL 507

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                    A  +S  G+  +++  K     +   ++        T   F+     + P 
Sbjct: 508 TTLKGKQANALFWSPAGRYIILAGLKGFNGQLEFYNVDE-LETMATAEHFMATDIEWDPT 566

Query: 313 SSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              +     S  E +    +   NG    RI +D    +F  +W P+
Sbjct: 567 GRYVATSVTSVHEMENGFNIWSFNGKLLYRILKDH---FFQFLWRPR 610



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 39/121 (32%), Gaps = 6/121 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQL--YVMQS--NGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           ++ P   +         +  +  Y M+S  N     +++  K        WSP G  I  
Sbjct: 470 AWEPKGHRFAVIHGDSPRPDVSFYTMRSGSNTGRVSKLTTLKGKQANALFWSPAGRYIIL 529

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSRKKDGDTGSKLYSI 421
               G    +     D  +     E        W P+GR +    +   + + G  ++S 
Sbjct: 530 AGLKGFNGQLEFYNVDELETMATAEHFMATDIEWDPTGRYVATSVTSVHEMENGFNIWSF 589

Query: 422 D 422
           +
Sbjct: 590 N 590


>gi|147783779|emb|CAN61446.1| hypothetical protein VITISV_024139 [Vitis vinifera]
          Length = 315

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 39/236 (16%), Positives = 82/236 (34%), Gaps = 19/236 (8%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +     + D+ +   +FS +   +A A+ D      + +  ++      R+      I
Sbjct: 16  YRLLRTLAAHDRAVSCVKFSSDGTLLASASLDK----TLIVWSSQTLTLKSRLVGHSGGI 71

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFE 319
               +SS+      S   D  + I+  D QS    + L     +    +++P S+ IV  
Sbjct: 72  SDLAWSSDSHYIC-SASDDLTLRIW--DAQSAECVKTLRGHTDLVFCVNFNPQSNLIVSG 128

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + +                       ++  G LI      G    I      
Sbjct: 129 SF---DETVRIWDVKTGRPLHTIAAHSMPVTSVYFNRDGSLIVSGSHDGS-CKIWASDT- 183

Query: 380 GSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT 433
           G+  + L+ED+   +    +SP+G+ ++ +   D     KL++    G++  +   
Sbjct: 184 GALLKTLIEDNGPAISFAKFSPNGKYILVATLDD---TLKLWNYS-TGKSLKIYTG 235



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 69/197 (35%), Gaps = 12/197 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    ++ + D       +   +    +    F+ +   +   ++D     +++  DT
Sbjct: 126 VSGSFDETVRIWDVKTGRPLHTIAAHSMPVTSVYFNRDGSLIVSGSHD--GSCKIWASDT 183

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LF 302
                     N  ++  A +FS NGK  L++   D+ + +++      + +  T      
Sbjct: 184 GALLKTLIEDNGPAISFA-KFSPNGKYILVAT-LDDTLKLWNYS-TGKSLKIYTGHVNKV 240

Query: 303 INISASYSPD-SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
             I++++S      IV  S+    + +YV    G +  +  +    +       P  + I
Sbjct: 241 YCIASAFSVTYGKYIVSGSE---DKCVYVWDLQGKNPLQKLEGHTDTVISVSCHPNENKI 297

Query: 362 AFTKFS-GEKFAIGVMK 377
           A           I V  
Sbjct: 298 ASAGLDXDRTVRIWVQD 314



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 81/220 (36%), Gaps = 40/220 (18%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                   R+WDVK  + +                HTI+       +          ++ 
Sbjct: 127 SGSFDETVRIWDVKTGRPL----------------HTIAAHSMPVTS----------VYF 160

Query: 181 SESV---VSGIIKNSLCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
           +      VSG    S  +   D GA ++ L       +   +FSPN + +  AT DD   
Sbjct: 161 NRDGSLIVSGSHDGSCKIWASDTGALLKTLIEDNGPAISFAKFSPNGKYILVATLDD--- 217

Query: 237 LRVYLMDTRIDRAPKRIGNFRSMI--LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
             + L +    ++ K      + +  +A  FS    + ++S  +D+ + ++  DLQ    
Sbjct: 218 -TLKLWNYSTGKSLKIYTGHVNKVYCIASAFSVTYGKYIVSGSEDKCVYVW--DLQGKNP 274

Query: 295 -ERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQ 332
            ++L       IS S  P+ ++I     D +   +++V  
Sbjct: 275 LQKLEGHTDTVISVSCHPNENKIASAGLDXDRTVRIWVQD 314


>gi|123470945|ref|XP_001318675.1| hypothetical protein [Trichomonas vaginalis G3]
 gi|121901440|gb|EAY06452.1| hypothetical protein TVAG_149380 [Trichomonas vaginalis G3]
          Length = 521

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 47/320 (14%), Positives = 108/320 (33%), Gaps = 31/320 (9%)

Query: 140 IGKKFFSSPASWRKIAHTISDDIYQSITGEKG--DFNSRILFVSESVVSGIIKNSL---- 193
           + ++F          +  ++D  ++  TG +    F   +  +  + V   I+  L    
Sbjct: 68  VTQEFQVGQNEKPITSLKVNDTGFKFYTGGENSTIFYFDLSSMKANGVRCQIRIELDENY 127

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            + D D    + L  +         F P   K     Y+           T        +
Sbjct: 128 SISDIDTNVDQTLIAAASGSPIIRIFDPKGLK----KYESRRGDMYIYDTTHTYGHTAAV 183

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFI---NISAS 308
              +       F       L +  +D  +  + VD         RL     I     +  
Sbjct: 184 TGLQ-------FRPGSTDELATCSQDGTLRFWKVDHMEEQVMIYRLGKQGGIRFPGYAMR 236

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQGDLIAFTKFS 367
           ++ D +  VF S  +  + L +  ++G+ ++   Q    +       SP G+ +   + +
Sbjct: 237 WTNDGN-AVFVSSND--QTLSLYDNSGNSRQASMQIPLPNVCGSIAISPDGNHVCTRELT 293

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL-----IFSRKKDGDTGSKLYSID 422
            +   +  ++        ++ DS  Q+  +SP+G +L     +    K G +   + ++ 
Sbjct: 294 NKGVQLWDIRNINEPLWNILSDSRGQSICFSPNGENLLVGESVLKTSKKGGSIKIVSTLS 353

Query: 423 LNGRNETLINTPAYASDPQW 442
            + ++E L+ +    +  QW
Sbjct: 354 GDLKDEVLMPSNVGVNALQW 373


>gi|118097984|ref|XP_414858.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 326

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 34/265 (12%), Positives = 83/265 (31%), Gaps = 29/265 (10%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S    +G     +  ++ +  N         + +    F  + +   +     ED +   
Sbjct: 55  SMIAAAGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGR---WMYTGGEDCMARI 111

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                 +   +RI    + I       N    ++    D++  I+  DL+++  E+L   
Sbjct: 112 WDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIV---GDQSGAIHIWDLKTDHNEQLIPE 168

Query: 301 LFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--------DKEASYFD 351
             +++ S    PD+S +   +        YV    G   + ++Q                
Sbjct: 169 PEVSVNSVHIDPDASYMAAVNSSG---NCYVWNLTGGIGEEVTQLIPKTKIPAHNRYALQ 225

Query: 352 PVWSPQGDLIAFTK-------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             +SP   L+A          +    F++       S          +    +S   + +
Sbjct: 226 CKFSPDSTLLATCSADQTCKIWRTSNFSLMTELSIKSNNPGETSRGWMWDCAFSGDSQYI 285

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNET 429
           + +     D  ++L+ ++  G  + 
Sbjct: 286 VTASS---DNLARLWCVE-TGEIKR 306


>gi|120610124|ref|YP_969802.1| hypothetical protein Aave_1437 [Acidovorax citrulli AAC00-1]
 gi|120588588|gb|ABM32028.1| conserved hypothetical protein [Acidovorax citrulli AAC00-1]
          Length = 306

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 40/261 (15%), Positives = 85/261 (32%), Gaps = 15/261 (5%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VV+  + +SL  +D   A ++    +        RF+P+ + +  A      +   Y  D
Sbjct: 52  VVANALADSLTFIDPRTAQVQRTVRNIVDPYHL-RFTPDMKWLITAANRLNHV-DFYRWD 109

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
                  +R+        +  +  +G R + S  +D + ++ ++D+ +      T T  +
Sbjct: 110 GHDLTLVQRVAT--GRTPSHLWVDSGSRVVYSTMQD-SDELVAIDIATQKIRWRTKTGPM 166

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-YFDPVWSPQGDLIA 362
                 S D  + +F     G + + V   +G++ + + + K  S       +     I 
Sbjct: 167 PADIYGSAD-DKFLFV-GLTGGDGVEVFDVSGAEPRLVQRIKTGSGAHAFRGAGDKRHIF 224

Query: 363 FTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +        I  +     +   +            SP GR +  S         K+  I
Sbjct: 225 VSNRVANT--ISKIDMTTQKVVDVYPAPGGPDCMDVSPDGRWIYVSA----RWAKKMLVI 278

Query: 422 DLNGRNETLINTPAYASDPQW 442
           D   R          +    W
Sbjct: 279 DTVERKVVQRINVGKSPHGVW 299


>gi|12858607|dbj|BAB31380.1| unnamed protein product [Mus musculus]
          Length = 922

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 77/230 (33%), Gaps = 27/230 (11%)

Query: 184 VVSGIIKNSLCVMDRDG-----ANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDIL 237
           V     +  L  +   G          +     + ++  RF P     +A ++YD    L
Sbjct: 559 VAGEDARIRLWRVPPGGLENVLTTPETVLTGHTEKIYSLRFHPLAADVLASSSYD----L 614

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V + D +      ++   +  I +  +S +GK+   +V KD  + +Y     S    + 
Sbjct: 615 TVRIWDLQTGAERLKLQGHQDQIFSLAWSPDGKQLA-TVCKDGHVRVYE-PRSSPLPLQE 672

Query: 298 TNTLFINISAS--YSPDSSQIV---FESDREGKEQLYVMQS-NGSDQKRISQDKEASYFD 351
                    A   +  D   ++   F+S  E + QLY+  +        +  D   S   
Sbjct: 673 GPGPEGGRGARIVWVCDGGCLLVSGFDSRSERQLQLYIADALAQGPSALLGLDVAPSTLL 732

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPS 400
           P + P   L+  T     +  +         E L      L+  ++ SP 
Sbjct: 733 PSYDPDTGLVLLTGKGDTRVFLY--------EVLPEAPFFLECNSFTSPD 774


>gi|326432164|gb|EGD77734.1| hypothetical protein PTSG_08825 [Salpingoeca sp. ATCC 50818]
          Length = 511

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 38/260 (14%), Positives = 78/260 (30%), Gaps = 30/260 (11%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF 179
            +DR  V F    V    ++ G    +  +S    A  ++    ++     G       F
Sbjct: 278 SQDRSSVNFATCSVDGAVKLWGLDSTTPVSSLPGHAARVA----RAEFHPSGKLLMTTCF 333

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATYDDEDIL 237
                        L     D +N   +       + +++  F P+      ++ D     
Sbjct: 334 --------DHSWRLW----DLSNEVEVLHQEGHSRPVYDAAFHPDGSLCGTSSLDHTGR- 380

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TER 296
              + D R  +    +      +LA +FS NG     +   D  + I+  DL+       
Sbjct: 381 ---IWDLRTGKNIMVLQGHTKNVLALQFSPNGYHVA-TGSDDNTVRIW--DLRKQQCVYT 434

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
           L     +     Y    +  V  S  +   +++   + G    ++ +  E        S 
Sbjct: 435 LPAHTNLVSGLRYHSSGNFFV-TSSYDETAKVWT--APGCAPLKVLRGHEGKVMSIDVSN 491

Query: 357 QGDLIAFTKFSGEKFAIGVM 376
               IA + +    F +   
Sbjct: 492 DAKYIATSSWD-RTFKLWTQ 510



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 28/207 (13%), Positives = 69/207 (33%), Gaps = 11/207 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALIS 275
           RFSP+ + +  A++     L      T +           ++   P    S +      +
Sbjct: 228 RFSPDSKILGVASWTGTVKLWAVPACTEMSTYRAHAERVSALSWHPSACISQDRSSVNFA 287

Query: 276 V-QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
               D A+ ++ +D  +     L         A + P   +++  +  +   +L+ + + 
Sbjct: 288 TCSVDGAVKLWGLD-STTPVSSLPGHAARVARAEFHPSG-KLLMTTCFDHSWRLWDLSNE 345

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
                +  +      +D  + P G L   +        I  ++   +   L     N+ A
Sbjct: 346 VEVLHQ--EGHSRPVYDAAFHPDGSLCGTSSLDHTG-RIWDLRTGKNIMVLQGHTKNVLA 402

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             +SP+G  +        D   +++ +
Sbjct: 403 LQFSPNGYHVATGSD---DNTVRIWDL 426


>gi|313216635|emb|CBY37907.1| unnamed protein product [Oikopleura dioica]
          Length = 435

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 44/137 (32%), Gaps = 23/137 (16%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +A +SP    + F        ++ V++S+      I    +       WSP   LI   
Sbjct: 15  TNAKFSPLGKYLAFVY----ANKICVLKSDSLQTLTILTTIDQ-VKHFEWSPDSQLILAV 69

Query: 365 KFSGEK---FAI----GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
                K   F I         D            ++  T+SP  R +I++     +    
Sbjct: 70  MPGRNKLQAFDITDNKWTCSIDAGGL-------GIEWATFSPDSRHIIYA----NEFHLM 118

Query: 418 LYSIDLNGRNETLINTP 434
           L  I L  ++   I  P
Sbjct: 119 LSVISLIDKSVRTIEWP 135


>gi|299117616|emb|CBN75458.1| Intraflagellar transport protein 172 [Ectocarpus siliculosus]
          Length = 1720

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 89/242 (36%), Gaps = 45/242 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS-------MILAPRFSSNGK 270
            ++PN +K+A  T D     RV  +         R     +       ++    FS +  
Sbjct: 30  AWAPNNRKLAVCTAD-----RVVALYDENGEKRDRFSTKPAEKGPKNYIVRDLCFSPDST 84

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           R  ++ Q D  + +Y + L+   ++ +      N     SP    I   S  E +    V
Sbjct: 85  RLAVA-QSDSIVFVYKLGLEWGESKSI-----CNKFPQPSP----ITCMSWPEARPNEVV 134

Query: 331 MQSNGSDQK--RISQDKEASYFDPVW-------SPQGDLIAFTKFSGEKFAIGVMKKDG- 380
                   K  ++  ++ A+ ++          SP G+ +      G  +   +   +G 
Sbjct: 135 FGLAEGKVKIGQLKSNRPATLYNVDSFCAALATSPDGNGVVSAHADGTLYR-FLFDDNGA 193

Query: 381 -SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            S  +L++  S   A +W   G S++ +   DG    ++   D +G  E   +   Y+SD
Sbjct: 194 PSHTKLVIHPSVPYALSW---GLSIV-AAGNDG----QVVFYDADGGMERTFD---YSSD 242

Query: 440 PQ 441
           P 
Sbjct: 243 PS 244


>gi|156742417|ref|YP_001432546.1| hypothetical protein Rcas_2448 [Roseiflexus castenholzii DSM 13941]
 gi|156233745|gb|ABU58528.1| hypothetical protein Rcas_2448 [Roseiflexus castenholzii DSM 13941]
          Length = 391

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 47/142 (33%), Gaps = 24/142 (16%)

Query: 288 DLQSNATERLTNTLFIN-----ISASYSPDSSQIVFESDR----------EGKEQLYVMQ 332
                   +LT  +  N        S+      I+F SDR          + +  ++ + 
Sbjct: 15  SATGRTIRQLTA-IGNNVHLYFTENSFDAVEPAIIFLSDRASGEDRAPHEDPRYNVFRLD 73

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL---VED 389
               +  +++ + E  +     +P   +I +   +     +            +    + 
Sbjct: 74  LVSGEIMQLTDEPEGVHSVTK-TPDSRIIVYIVGN----RVRAFDTATGVATTIYEETDP 128

Query: 390 SNLQAPTWSPSGRSLIFSRKKD 411
            +L AP+ +P+ R + F R + 
Sbjct: 129 FSLGAPSIAPNRRYVAFCRNEQ 150



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 19/116 (16%)

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                 S R     + +    G   +RI      +++    SP    +       +   +
Sbjct: 283 KSTASTSFR---PYVGLANRRGDVIRRIDMPYYTNHYHA--SPDATRLV----GDDVDDL 333

Query: 374 GVMKKDGSQERLLV----------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
            ++   G++ RL              S+   PTWS  G  ++++  +DG     L 
Sbjct: 334 VLIDISGNEARLETLVRNHGTSWHTQSSHCHPTWSWDGSRILYASDRDGRVNLYLV 389


>gi|227818845|ref|YP_002822816.1| adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii NGR234]
 gi|36959103|gb|AAQ87528.1| Putative adenylate cyclase 3 [Sinorhizobium fredii NGR234]
 gi|227337844|gb|ACP22063.1| probable adenylate class-3/4/guanylyl cyclase [Sinorhizobium fredii
           NGR234]
          Length = 769

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 78/206 (37%), Gaps = 20/206 (9%)

Query: 45  YSPVS----IAFTKFVSIDELGGK-------VSEVVSKDLQRSDVFNLISQDSFKQKITN 93
             P+     IA   F ++    G+         +V+++  + S +F +I+++S       
Sbjct: 227 ALPLPQKPSIAVLPFENLSSDAGQSYFADGMTDDVITELSKLSGIF-VIARNSTFAYKGK 285

Query: 94  PDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK 153
           P  + +      LG   ++ G V +EG + +RV  +L D  D   +  +++    +    
Sbjct: 286 PTKVQQVA--KELGVHYILEGSVRREG-NHVRVNAQLIDALDGHHLWAQRYDGEMSGVFG 342

Query: 154 IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD---RDGANIRYLTPSR 210
           +   +   I  +++ +       +  V E++        L   D   RD      +  + 
Sbjct: 343 LQDRVIGQIVSTLSVKLTSAEKSVAAVPETINPRAYDTLLQGWDHLRRDTEAEMAMAAAF 402

Query: 211 DQ--ILFEPRFSPNQQKVAYATYDDE 234
            Q  I+ +P +S     +A A +   
Sbjct: 403 FQKAIVLDPSYSRAYASLAAANWRTS 428


>gi|302885208|ref|XP_003041497.1| hypothetical protein NECHADRAFT_82204 [Nectria haematococca mpVI
           77-13-4]
 gi|256722399|gb|EEU35784.1| hypothetical protein NECHADRAFT_82204 [Nectria haematococca mpVI
           77-13-4]
          Length = 746

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 64/178 (35%), Gaps = 16/178 (8%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-ATERLTNTLFINISASYS 310
            +G      L+  FS +    L S      + ++  D+ +    +RL     I   A +S
Sbjct: 112 VLGGSEKSHLSFAFSPD-STVLASGGYTGPVKLW--DVATGVELQRLEFYESIRCIA-FS 167

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD---PVWSPQGDLIAFTKFS 367
            D  Q+       G      +   GS+ + +  +    + D      +P+GD+IA    +
Sbjct: 168 KDGKQLAL----GGVLGFLCVWEPGSN-RTVKFEGAHFFHDLDVIAITPKGDMIA-ATVN 221

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-KDGDTGSKLYSIDLN 424
             +  +     D SQ+R         A  ++P+GR L             +L+ +  +
Sbjct: 222 ARRLGLW-STTDSSQKRTRDLKGEPHAIQFAPNGRILAIVVNIYHRQHCIQLWDVATD 278


>gi|242048030|ref|XP_002461761.1| hypothetical protein SORBIDRAFT_02g007630 [Sorghum bicolor]
 gi|241925138|gb|EER98282.1| hypothetical protein SORBIDRAFT_02g007630 [Sorghum bicolor]
          Length = 350

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 41/256 (16%), Positives = 86/256 (33%), Gaps = 30/256 (11%)

Query: 146 SSPASWRKIAHTIS---DDIYQSITGE-KGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
              +  R+ AH ++   D ++        G  +  +L    +  SG     +     DGA
Sbjct: 3   GGASELRE-AHRLTGHGDRVWALAWNPAPGPGSGPVL----ASCSGDKTVRIWKRAPDGA 57

Query: 202 NI--RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
                 L  + ++ +    +SPN + +A  ++D      V+            +    + 
Sbjct: 58  WQCSDVLEDTHNRTVRSCAWSPNGKMLATGSFDA--TTAVWEYKGGDFECVATLEGHENE 115

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---TERLTNTLFINISASYSPDSSQI 316
           + +  +S +G     +  +D+   I+ V L  N       LT          + P    +
Sbjct: 116 VKSVSWSPSGSLLA-TCSRDKTAWIWEV-LPGNEFECASVLTGHTQDVKMVQWHPVLDIL 173

Query: 317 VFESDREGKEQLYVMQSNGSDQ----KRISQDKEASYFDPVWS----PQGDLIAFTKFSG 368
           V  S       + V   +G D+    + +++     +   VW+     +GD +       
Sbjct: 174 VSVSY---DNTIRVWADDGDDEWHCVQTLTEANNCGHSSTVWALSFNFKGDRMVTCS-DD 229

Query: 369 EKFAIGVMKKDGSQER 384
           +   I     D SQ +
Sbjct: 230 QTLKIWDTSADLSQPK 245



 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 50/140 (35%), Gaps = 16/140 (11%)

Query: 292 NATERLTNTLFINISASYSPD---SSQIVFESDREGKE-QLYVMQSNGS--DQKRISQDK 345
               RLT       + +++P     S  V  S    K  +++    +G+      +    
Sbjct: 9   REAHRLTGHGDRVWALAWNPAPGPGSGPVLASCSGDKTVRIWKRAPDGAWQCSDVLEDTH 68

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ----ERLLVEDSNLQAPTWSPSG 401
             +     WSP G ++A   F        V +  G        L   ++ +++ +WSPSG
Sbjct: 69  NRTVRSCAWSPNGKMLATGSFDATT---AVWEYKGGDFECVATLEGHENEVKSVSWSPSG 125

Query: 402 RSLIFSRKKDGDTGSKLYSI 421
             L    +   D  + ++ +
Sbjct: 126 SLLATCSR---DKTAWIWEV 142


>gi|226313566|ref|YP_002773460.1| hypothetical protein BBR47_39790 [Brevibacillus brevis NBRC 100599]
 gi|226096514|dbj|BAH44956.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 360

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 30/202 (14%), Positives = 64/202 (31%), Gaps = 34/202 (16%)

Query: 116 VIKEGKDRLRVEFRLWDVKD--RKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDF 173
           V   GKD L+  + L+D     +  +  K    +P + +K+     D I Q +   +  F
Sbjct: 131 VKVLGKDGLKDFYHLFDPATYPQTTLEAKSIQVNPETRQKM-----DKIEQKLYTNEDIF 185

Query: 174 NSR-----ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           ++               +   +  +  +   G +            +   +SP+ + +  
Sbjct: 186 HAEWSPNFQAVAYYKGTTEEGQAYIWKV---GNDSPSPIKEAVIDRYFFTWSPDSEYLLL 242

Query: 229 -ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-------- 279
                     ++Y +       P       S I    FS + + A  S+           
Sbjct: 243 DTGTSRHRGGQIYQVANDKMSEP------FSYISQFHFSPDSRWAAFSLSSGRVAKEKYG 296

Query: 280 ----EAMDIYSVDLQSNATERL 297
               +  DI+  DL +   ++L
Sbjct: 297 MEDEDTEDIWLYDLATMKQKKL 318



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 51/159 (32%), Gaps = 27/159 (16%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
           ++ +F   +SPN Q VAY     E+             +P +            +S + +
Sbjct: 181 NEDIFHAEWSPNFQAVAYYKGTTEEGQAYIWKVGNDSPSPIKEAVIDRYFF--TWSPDSE 238

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTL-----FINISASYSPDSSQIVF--ESDR- 322
             L+        D  +   +     ++ N              +SPDS    F   S R 
Sbjct: 239 YLLL--------DTGTSRHRGGQIYQVANDKMSEPFSYISQFHFSPDSRWAAFSLSSGRV 290

Query: 323 ---------EGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                    E  E +++       QK++ Q  + + + P
Sbjct: 291 AKEKYGMEDEDTEDIWLYDLATMKQKKLLQADDHTDYFP 329



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 37/227 (16%), Positives = 71/227 (31%), Gaps = 40/227 (17%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK----- 251
           D DG N RY   S   +    +   +  K  Y  +D     +  L    I   P+     
Sbjct: 115 DGDGRNARYYERSTHHVKVLGK---DGLKDFYHLFDPATYPQTTLEAKSIQVNPETRQKM 171

Query: 252 ----RIGNFRSMILAPRFSSNGKRALIS--VQKDEAMDIYSVDLQSNATERLTNTLFIN- 304
               +       I    +S N +         ++    I+ V   S +  +      I+ 
Sbjct: 172 DKIEQKLYTNEDIFHAEWSPNFQAVAYYKGTTEEGQAYIWKVGNDSPSPIK---EAVIDR 228

Query: 305 ISASYSPDSSQIVFES--DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              ++SPDS  ++ ++   R    Q+Y + ++   +        +      +SP     A
Sbjct: 229 YFFTWSPDSEYLLLDTGTSRHRGGQIYQVANDKMSEP------FSYISQFHFSPDSRWAA 282

Query: 363 FTKFSGEKF------------AIGVMKKDGSQERLL--VEDSNLQAP 395
           F+  SG                I +      +++ L   +D     P
Sbjct: 283 FSLSSGRVAKEKYGMEDEDTEDIWLYDLATMKQKKLLQADDHTDYFP 329



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 3/99 (3%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS-NLQAPTWSPSGRSLIFSR 408
           F   WSP    +A+ K + E+    + K        + E   +    TWSP    L+   
Sbjct: 185 FHAEWSPNFQAVAYYKGTTEEGQAYIWKVGNDSPSPIKEAVIDRYFFTWSPDSEYLLLDT 244

Query: 409 KKDGDTGSKLYSIDLNGRNETL--INTPAYASDPQWVGF 445
                 G ++Y +  +  +E    I+   ++ D +W  F
Sbjct: 245 GTSRHRGGQIYQVANDKMSEPFSYISQFHFSPDSRWAAF 283


>gi|212536550|ref|XP_002148431.1| ribosome biogenesis protein Rsa4, putative [Penicillium marneffei
           ATCC 18224]
 gi|210070830|gb|EEA24920.1| ribosome biogenesis protein Rsa4, putative [Penicillium marneffei
           ATCC 18224]
          Length = 513

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 76/244 (31%), Gaps = 16/244 (6%)

Query: 129 RLWDVKDRK--QIIGKKFFSSPASWRKIAHTIS---DDIYQSITGEKGDFNSRILFVSES 183
           R+WDV +++   ++  K   +   W  I    +   D   +  + + G   + +   +  
Sbjct: 261 RIWDVVNKRIEMVLSHKDSVTCVRWGGIGKIYTASLDKAVRVWSAKDGTLITALNAHTHR 320

Query: 184 VVSGIIKNS--LCVMDRDGANIRYLTPSRDQILFEPRFSPN---QQKVAYATYDDEDILR 238
           V    +     L     D  +    T +    + + RF      Q K+        D   
Sbjct: 321 VNHLALSTDFVLRTAFHDHTHKIPETEAEKVEVAKKRFEKAATVQGKITERLVSASDDFT 380

Query: 239 VYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           +YL D      P  R+   +  +    FS +G     S   D  + +++          L
Sbjct: 381 MYLWDPESSTKPVARMLGHQKAVNHVTFSPDGAYIA-SAAFDNHVKLWNA-RDGKFINTL 438

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              +       +S DS  +V  S       L +               E   F   WSP 
Sbjct: 439 RGHVAAVYQCCFSADSRLLVSSSQ---DSTLKIFDVRTGKLVMDLPGHEDQVFAVDWSPD 495

Query: 358 GDLI 361
           G+ +
Sbjct: 496 GERV 499



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 46/138 (33%), Gaps = 16/138 (11%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++  +  +    R+          ++SPD + I   +       + +  
Sbjct: 372 LVSASDDFTMYLWDPESSTKPVARMLGHQKAVNHVTFSPDGAYIASAAF---DNHVKLWN 428

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIG----VMKKDGSQERLL 386
           +         +   A+ +   +S    L+  +        F +     VM   G ++++ 
Sbjct: 429 ARDGKFINTLRGHVAAVYQCCFSADSRLLVSSSQDSTLKIFDVRTGKLVMDLPGHEDQVF 488

Query: 387 VEDSNLQAPTWSPSGRSL 404
             D       WSP G  +
Sbjct: 489 AVD-------WSPDGERV 499


>gi|300920527|ref|ZP_07136953.1| peptidase, S54 family protein [Escherichia coli MS 115-1]
 gi|300412466|gb|EFJ95776.1| peptidase, S54 family protein [Escherichia coli MS 115-1]
          Length = 625

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 33/223 (14%), Positives = 74/223 (33%), Gaps = 17/223 (7%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T            S + +K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSLI--LSRDGKKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + K  LI        DI  ++  ++  E            +  +
Sbjct: 440 TGTSGKPGAWVMALSPDEKTLLIPGMVRG--DIVRINTITHQKEDFPAGDARGTISAMRF 497

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++  ++F  D +G  ++ V     S   +      + Y     SP G  +A   +  +
Sbjct: 498 RPENGDVIFA-DSQGISRIRVGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 554

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            + I ++  +  Q   +   S +    +S  GR + F   K+G
Sbjct: 555 GYVI-LLNINVGQIVGVYPASYVNHLRFSADGRKI-FVMAKNG 595


>gi|255035226|ref|YP_003085847.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Dyadobacter fermentans DSM 18053]
 gi|254947982|gb|ACT92682.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Dyadobacter fermentans DSM 18053]
          Length = 776

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 16/118 (13%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE----ASYFDPVWSPQGDLIAFTKFSG 368
                ++++     ++     +    K I   K+      +     SP     AF +   
Sbjct: 145 GKWFAYDTESGTARKIDK--PDFPKPKEIGWTKQLSRWGRFRADSVSPDKQTKAFVRNG- 201

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSGRSLIFSR--KKDGDTGSKLYS 420
               I + KK+    + L  D N   P    +WSP G+ L+  R  ++D    S ++S
Sbjct: 202 ---NIYLGKKEDKIGKQLTYDGNPLKPYGELSWSPDGKYLVCYRIDRRDERQVSIIFS 256


>gi|198429994|ref|XP_002130425.1| PREDICTED: similar to WD repeat, SAM and U-box domain-containing
           protein 1 [Ciona intestinalis]
          Length = 610

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 77/216 (35%), Gaps = 26/216 (12%)

Query: 108 AQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSIT 167
           + +LVTG         +     LWD+  +KQ+  K       +    A T  D     + 
Sbjct: 110 SNLLVTGS----ADGSIA----LWDINSKKQVRIKAGH-PEGNVYAAAFTPCD---HFLL 157

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS-----PN 222
                 + R+  + ++ +      SL     +G      +     I+F P F      P+
Sbjct: 158 TGSALGDIRMWNMQQNRI--FQPISLTQAHDEG----ISSCGVTCIVFSPTFHQSLDNPD 211

Query: 223 QQKVAYATYDDEDI-LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  +  ++  D ++ + ++   +R  +  + +      + +  FS +G     SV  D+ 
Sbjct: 212 RSYLVASSGQDNNVKMWIFNYASRSLQLFQTLSGHGGPVNSCDFSLDGSNIA-SVSFDKT 270

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           + I+   +       L     I  S SYS D   + 
Sbjct: 271 VRIW-ASISGETEMVLDGHSTIVTSVSYSRDGKYLA 305



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 14/134 (10%), Positives = 47/134 (35%), Gaps = 9/134 (6%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR--YLTPSRDQILFEPRF 219
           ++     +  D   R   V+ S     +K  + + +    +++           +    F
Sbjct: 198 VFSPTFHQSLDNPDRSYLVASSGQDNNVK--MWIFNYASRSLQLFQTLSGHGGPVNSCDF 255

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +   +A  ++D      V +  +        +    +++ +  +S +GK    +   D
Sbjct: 256 SLDGSNIASVSFDK----TVRIWASISGETEMVLDGHSTIVTSVSYSRDGKYLA-TTGYD 310

Query: 280 EAMDIYSVDLQSNA 293
           +   ++ +  ++ +
Sbjct: 311 KVTTVWKIQGETTS 324


>gi|196009674|ref|XP_002114702.1| hypothetical protein TRIADDRAFT_58457 [Trichoplax adhaerens]
 gi|190582764|gb|EDV22836.1| hypothetical protein TRIADDRAFT_58457 [Trichoplax adhaerens]
          Length = 1089

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 37/255 (14%), Positives = 78/255 (30%), Gaps = 18/255 (7%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D I  +   E    + R       +V+      + V D     +        +I     F
Sbjct: 605 DSITTAYLHEGAVSDCRYSCDGRRIVTSSWDGIIKVWDPISTAVFVQFHGVHKISCC-CF 663

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SPN++ V  A++         + D  ++R      N    I    FS +G+    S  KD
Sbjct: 664 SPNRRYVVTASWTG----TAQVWDIEMERLHLEYSNHSDRIYWCDFSPDGQYIA-SCSKD 718

Query: 280 EAMDIYSVDLQSNAT-----ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           + + I+ + +           +  ++ +   S ++  D   I+         Q     S 
Sbjct: 719 KTIRIWKIPVAKVILDCVCHRQ--DSNYRITSCAFFNDDQAILCT-----YRQFVHTWSC 771

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            + +                S     +A +        +  +                QA
Sbjct: 772 ATGEPLFQLKCFGPITASALSCNSKYLAVSVRGSNAVQVWNLSNQKQVAFYRGHTDYTQA 831

Query: 395 PTWSPSGRSLIFSRK 409
             ++P+G+++I +  
Sbjct: 832 VHFAPNGKTIISASD 846


>gi|164659474|ref|XP_001730861.1| hypothetical protein MGL_1860 [Malassezia globosa CBS 7966]
 gi|159104759|gb|EDP43647.1| hypothetical protein MGL_1860 [Malassezia globosa CBS 7966]
          Length = 583

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 71/233 (30%), Gaps = 31/233 (13%)

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIA-----HTI---------------SDDI 162
               + +LWD +    +  K F   P   R        H                 +D+I
Sbjct: 357 SYDGQVKLWDAETGACVAAKSFGDVPICVRFHPDEDKQHMFLVGTNDRRIVQYDLRADEI 416

Query: 163 YQSITGEKGDFNSRILFVSESV--VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF- 219
            Q     +G  N+ I FV  +   VS     SL   D D      L      +   P   
Sbjct: 417 TQEYNEHQGPVNT-ITFVDHNRRFVSTSDDKSLRAWDYDIPVPIKLVAD-PLMHSMPAVT 474

Query: 220 -SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
             P Q+ +A     +  I      + +  +   R            FS +G+        
Sbjct: 475 LHPTQRWLA-CQAMNNSITVYSAENFKPRKKAFRGHTTAGFACQVGFSPDGR---FLSSG 530

Query: 279 DEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           D   D+   D +S    +RL     + I+  + P  +  V     +G  +L+ 
Sbjct: 531 DSQGDLVFWDWKSGKQLKRLHTHKDVVIAHEWLPHETSKVLTGSWDGLIKLWT 583


>gi|156053177|ref|XP_001592515.1| hypothetical protein SS1G_06756 [Sclerotinia sclerotiorum 1980]
 gi|154704534|gb|EDO04273.1| hypothetical protein SS1G_06756 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 332

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 26/213 (12%), Positives = 65/213 (30%), Gaps = 22/213 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS--- 275
           +SP+ + +      D   +      T +    + +   ++  ++  +S  G +  ++   
Sbjct: 131 WSPDGESLVVGNKADNIYILSPTQSTPVASHQQPV---QTNQISFCWS--GNKIFLTTGE 185

Query: 276 -----VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                +   +   ++++  +S+    L       +S    P +    F +       + +
Sbjct: 186 GRIKILSYPDFKPVFNMTFESSQPFTLNGHTSSCLSVEMQPTAR---FLASGGSDSIIAL 242

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
             +     +R   D         +S  G  I      G    I     +  +    V+  
Sbjct: 243 WDTTDWICQRTLIDMIGPVRSISFSFDGSYIVGGSDEGTGLEI--THTETGEHVYTVKGG 300

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
                 W P+   L +        G K+  +DL
Sbjct: 301 PCPVVAWHPNKYILAYVEN----GGLKIIGVDL 329


>gi|20089758|ref|NP_615833.1| hypothetical protein MA0874 [Methanosarcina acetivorans C2A]
 gi|19914695|gb|AAM04313.1| predicted protein [Methanosarcina acetivorans C2A]
          Length = 507

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 82/230 (35%), Gaps = 32/230 (13%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+Q  +    Y        +  +         +G   S+     F+ +GK          
Sbjct: 56  PDQANI--TPYGKSSPYLYWEYELGDVTPENTLGGRSSVQDCVSFAPDGKSVA----TGT 109

Query: 281 AMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             ++  V +        T  L  NIS  ++S D   ++   ++     +Y + +N  ++ 
Sbjct: 110 GSNLTVVSVSEKNV-LWTKILSGNISDLTFSEDGKYLL-VGEKSADGCIYSLDANTGEEI 167

Query: 340 RI--SQDKEASYFDPVWSP---------QGDLIAFTKF-----SGEKFAIGVMKKDGS-Q 382
           R   + D   +  +P + P             +A  ++      G    +     DG+  
Sbjct: 168 RTYRTSDDLGTDSNPKYQPCIYKITAAEDSVYVAAGRYWKDSKYGLASRVYGFSPDGTFS 227

Query: 383 ERLLVEDSNLQAPTW---SPSGRSLIFSR---KKDGDTGSKLYSIDLNGR 426
            +L   ++  ++  W   S  G+++++S        ++ + +YS+D  G+
Sbjct: 228 WKLPATENYARSVNWIDASQDGKNVVYSIGDWTNSLESDAVVYSVDAGGK 277


>gi|68487228|ref|XP_712497.1| potential COMPASS histone methyltransferase subunit Swd3p [Candida
           albicans SC5314]
 gi|46433889|gb|EAK93315.1| potential COMPASS histone methyltransferase subunit Swd3p [Candida
           albicans SC5314]
          Length = 383

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 33/229 (14%), Positives = 74/229 (32%), Gaps = 27/229 (11%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           + + D   IRY            +FSPN Q  A ++ + +    +Y+ +T   +    + 
Sbjct: 10  IQESDLYKIRYTINEPSITFTAIKFSPNGQNFACSSSNGK----IYIYNTTTGKLITTLS 65

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                I    +S      L S   D  + ++++  Q    + L    +   +  ++   +
Sbjct: 66  GHTKGISDIVYSPINSNILASCSDDLTIRLWNI-TQQRCIKLLRKHTYHITTLKFTQKGN 124

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
            ++  S  +    ++ + SNG                   +P   +I    + G    + 
Sbjct: 125 ILISGSS-DETITIWDITSNGGKILTTLAAHSDPVSSIALTPDDSIIVSASYDG---LMR 180

Query: 375 VMKKDGSQ-ERLLVEDSNLQAPT-----------------WSPSGRSLI 405
           +     SQ  + L   +     T                  SP+G+ ++
Sbjct: 181 LFDLQTSQCLKTLTNSTFGGHGTATASTNDVINFPIAKVELSPNGQFIL 229


>gi|283778944|ref|YP_003369699.1| WD-40 repeat-containing protein [Pirellula staleyi DSM 6068]
 gi|283437397|gb|ADB15839.1| WD-40 repeat protein [Pirellula staleyi DSM 6068]
          Length = 608

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 64/159 (40%), Gaps = 8/159 (5%)

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
           +R     ++I A  F+ +GK  +I+   D  +  +  +LQS     +  T    +S + S
Sbjct: 283 RRFKGHTNVIRAVVFTPDGKH-VITGSSDGTIRFW--NLQSGKQVDMVRTRRPALSLAIS 339

Query: 311 PDSSQIVFESDREGKEQLYVMQ----SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
            D   +      +   + + ++     +   ++ +S+D +       +SP G  +A    
Sbjct: 340 SDGESLA-CGMTDAVVKFWRLEKHPTISHHSERILSRDYKGDVLAIAFSPDGTKVAAGGN 398

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +   I  + + G + +    +  + +  WS SG  ++
Sbjct: 399 RQQHSRIWNLLEPGERCKSSTINGPVTSLVWSRSGERVL 437



 Score = 36.5 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 74/223 (33%), Gaps = 19/223 (8%)

Query: 142 KKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA 201
           +   ++P+  R   HT  + I   +    G          + V++G    ++   +    
Sbjct: 274 QAASNAPSVRRFKGHT--NVIRAVVFTPDG----------KHVITGSSDGTIRFWNLQSG 321

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSM 259
               +  +R   L     S + + +A    D             I    +RI +  ++  
Sbjct: 322 KQVDMVRTRRPALSL-AISSDGESLACGMTDAVVKFWRLEKHPTISHHSERILSRDYKGD 380

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +LA  FS +G +      + +   I+++ L+     + +       S  +S    +++  
Sbjct: 381 VLAIAFSPDGTKVAAGGNRQQHSRIWNL-LEPGERCKSSTINGPVTSLVWSRSGERVLLC 439

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            + + +   +   S  +   R S  +      P  S  G  + 
Sbjct: 440 -EEDSRSLRWFPNSTKNAVMRPSDQRSGKLLIP--SDDGPFVV 479


>gi|156398837|ref|XP_001638394.1| predicted protein [Nematostella vectensis]
 gi|156225514|gb|EDO46331.1| predicted protein [Nematostella vectensis]
          Length = 350

 Score = 45.0 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 45/287 (15%), Positives = 91/287 (31%), Gaps = 33/287 (11%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY-LTPSRDQILFEPRF 219
           +IY S     G+  + + F             + + +  G    + +       + +  F
Sbjct: 60  EIYSSRFHPSGETLASVGF----------DRLIYLWNVYGECENFAVLKGHTGAIMDVHF 109

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S +   +  A+ D      V L D       KR+    S + +   S  G + ++S   D
Sbjct: 110 STDGNTMFTASTDK----TVALWDYETGARMKRLKGHTSFVNSCCPSRRGMQYVVSGSDD 165

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             + ++  D +     +    +F   + ++S D+S  +F    +   ++ V     +D  
Sbjct: 166 STIKLW--DTRKRGCAQTFQNVFQVTAVAFS-DASDQIFSGGID--NEIKVWDLRKNDVL 220

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERL-LVEDSNLQA-- 394
                   +      SP G  +           + +          ++ L    N +   
Sbjct: 221 YKMSGHTDTVTGVQLSPDGSFLLSNSMDNTVRMWDVRAFAPMERCLKVFLGAQHNFEKNL 280

Query: 395 --PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
              +WSP G  +       G     +Y  D N R   L   P +A  
Sbjct: 281 IKCSWSPDGLMIA-----AGSADRFVYVWDTNSR-RILYKLPGHAGS 321


>gi|327395187|dbj|BAK12609.1| PQQ-dependent catabolism-associated beta-propeller protein [Pantoea
           ananatis AJ13355]
          Length = 333

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 66/207 (31%), Gaps = 51/207 (24%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
              +   S + K A+ S    E  ++   DL +    ++        +A +SPD  + V+
Sbjct: 37  HNNSLAVSPDEKTAVASYS--ERSEVVVYDLAAGKVRKVLKGYVTPRNALFSPDG-KAVY 93

Query: 319 ESD--------------------------------REGK---------EQLYVMQSNGSD 337
            SD                                R+G+           L V     + 
Sbjct: 94  LSDSSLGVVRKISTGTLDVETSLPLGPGAFGTAISRDGQRLYVNNEAASTLSVYDLTHNR 153

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPT 396
              +             SP G  +  T F G+K  I ++     + R  +   S L+A +
Sbjct: 154 PVAVVTGFAQPRQGIKISPDGKTVYVTNFKGDK--ITLVDAVTGEIRGEITGFSKLRAIS 211

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            S  GR+L ++     +T   +  +D 
Sbjct: 212 VSADGRTL-YAANSGSNT---IAVVDT 234



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 72/219 (32%), Gaps = 12/219 (5%)

Query: 161 DIYQSITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D+  S+    G F + I    + + V+    ++L V D        +     Q     + 
Sbjct: 111 DVETSLPLGPGAFGTAISRDGQRLYVNNEAASTLSVYDLTHNRPVAVVTGFAQPRQGIKI 170

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + V    +      ++ L+D         I  F S + A   S++G+         
Sbjct: 171 SPDGKTVYVTNF---KGDKITLVDAVTGEIRGEITGF-SKLRAISVSADGRTLY--AANS 224

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            +  I  VD Q  A             A+ +PD+  +   S   G   L V+ +      
Sbjct: 225 GSNTIAVVDTQKLAITATIPVGQDPYGAALTPDNRYVY--SGNLGDNSLSVIDTAAGKVV 282

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                 +A     V+S  G   A      +  +I V+  
Sbjct: 283 STVTGLDAPRQAIVFSKDG---ARAWVLNKDLSIAVVDL 318


>gi|320104438|ref|YP_004180029.1| WD40 repeat-containing protein [Isosphaera pallida ATCC 43644]
 gi|319751720|gb|ADV63480.1| WD40 repeat, subgroup [Isosphaera pallida ATCC 43644]
          Length = 835

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 34/228 (14%), Positives = 59/228 (25%), Gaps = 20/228 (8%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG-ANIRYLTPSRDQILFEPRFSPNQ 223
             TG      +        V      N++ + +  G      +       +    F P  
Sbjct: 573 RPTGPPSATTAATFLSDGRVAVAGTDNAVRLTEVQGDWEQFRVFEDHAGRVLALDFDPTG 632

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILAPRFSSNGKRALISVQKDEAM 282
             +A    D      + + +        R        + A RFS +G+            
Sbjct: 633 GLLAVGGGDPSRSGELVVWEVGKGMVVLRSEETHSDTVFAVRFSPDGRLLA---SGGADK 689

Query: 283 DIYSVDLQSNATER----LTNT-LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            +    L+     R     T+  L ++    +  D  Q+       G   + V   +  +
Sbjct: 690 FLKVTRLEDGKIIRSYEGHTHHVLGVD----WKSDGRQLA---SSGGDSVVKVWSFDTGE 742

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
           Q R  Q          W P G LIA            +   D  Q   
Sbjct: 743 QIRTCQAAGKQITALDWLPGGPLIAGAS---GDRQARLWNADNGQVTR 787


>gi|302553025|ref|ZP_07305367.1| peptide hydrolase [Streptomyces viridochromogenes DSM 40736]
 gi|302470643|gb|EFL33736.1| peptide hydrolase [Streptomyces viridochromogenes DSM 40736]
          Length = 604

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/232 (15%), Positives = 67/232 (28%), Gaps = 19/232 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS----RDQILFEPRFSP-NQQKVAY 228
           +  ++ V  +     + ++L V+  DG  +  L  +    R+  L    F+P +      
Sbjct: 167 DGSLIAVEHTEHGDAMHSALRVLRPDGGTVADLDDTEGGTRELGLEVLGFAPVDGDTRLL 226

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +         + D                + A  +  +G   LI+   +   +++  D
Sbjct: 227 IGHQRRGRWEPLVWDVASGEETDLALELPGDVSA-EWYPDGTGLLIAHSFEARSELFRYD 285

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           L S A   +         A+  PD S     S            S      R +      
Sbjct: 286 LASRALTEIPTPPGTVSGATARPDGSVEYLWS-----------SSAEPSAVRSTAGGVVL 334

Query: 349 YFDPVWSPQGDLI--AFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
               + SP    +   + +  G +    V K   +   L         PTW 
Sbjct: 335 DPPGMKSPGSVPVQDVWVEGPGGRIHALVQKPKDATGPLPTIFDIHGGPTWH 386



 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/206 (14%), Positives = 66/206 (32%), Gaps = 16/206 (7%)

Query: 248 RAPKRIGNFRSMILAPRFS--------SNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
              +R+ ++     APR S         +  R+L         ++Y+ D  +    ++T+
Sbjct: 5   GQQERMPDWEKRFRAPRVSLPDWAEDAPD--RSLFVSNATGTYELYAWDRSTGEQRQVTD 62

Query: 300 TLFINISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDP--VWSP 356
                     SPD + I +  D++G E  ++  Q        ++ +   + +        
Sbjct: 63  RPNGTTDGVLSPDGAWIWWFDDKDGDEFGVWRRQPFTGGADDLAAEGLDASYPAGLALGR 122

Query: 357 QGD-LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT- 414
            G   +       +   I +++       +     +      S  G  +     + GD  
Sbjct: 123 DGRTAVVGRSTDEDGTTIHLVRTGEEPVEIYRHRESAGVGDLSHDGSLIAVEHTEHGDAM 182

Query: 415 GSKLYSIDLNGRNET-LINTPAYASD 439
            S L  +  +G     L +T     +
Sbjct: 183 HSALRVLRPDGGTVADLDDTEGGTRE 208



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 35/257 (13%), Positives = 74/257 (28%), Gaps = 18/257 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
             +    R   +  P ++ +    +    +      +Y  D R     +++ +  +    
Sbjct: 11  PDWEKRFRAPRVSLPDWAEDAPDRSLFVSNATGTYELYAWD-RSTGEQRQVTDRPNGTTD 69

Query: 263 PRFSSNGKRALISVQKDE-AMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVF 318
              S +G        KD     ++     +   + L             +   D    V 
Sbjct: 70  GVLSPDGAWIWWFDDKDGDEFGVWRRQPFTGGADDLAAEGLDASYPAGLALGRDGRTAVV 129

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIGV 375
               +       +   G +   I + +E S      S  G LIA            A+ V
Sbjct: 130 GRSTDEDGTTIHLVRTGEEPVEIYRHRE-SAGVGDLSHDGSLIAVEHTEHGDAMHSALRV 188

Query: 376 MKKDGSQERLL--VEDSN----LQAPTWSP-SG-RSLIFSRKKDGDTGSKLYSIDLNGRN 427
           ++ DG     L   E       L+   ++P  G   L+   ++ G     ++ +      
Sbjct: 189 LRPDGGTVADLDDTEGGTRELGLEVLGFAPVDGDTRLLIGHQRRGRWEPLVWDVASGEET 248

Query: 428 ETLINTPAYASDPQWVG 444
           +  +  P   S  +W  
Sbjct: 249 DLALELPGDVSA-EWYP 264


>gi|302842753|ref|XP_002952919.1| hypothetical protein VOLCADRAFT_63171 [Volvox carteri f.
           nagariensis]
 gi|300261630|gb|EFJ45841.1| hypothetical protein VOLCADRAFT_63171 [Volvox carteri f.
           nagariensis]
          Length = 345

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 27/190 (14%), Positives = 63/190 (33%), Gaps = 27/190 (14%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-------- 304
           +   +  + +  +S  G     S   D+ + I+         ++     +          
Sbjct: 12  LTGHQDRVWSVAWSPKGDLLA-SCSGDKTVRIWQHPAGGVQQQQQQQQQWYCCAILDQCH 70

Query: 305 ----ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQG 358
                + ++SP+   +   S       + + + +G   ++++  +  E       W+P G
Sbjct: 71  SRTIRNIAWSPNGRALATASF---DATVAIWELSGGVWEQVAELEGHENEVKCTAWNPDG 127

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLL----VEDSNLQAPTWSPSGRSLIFSRKKDGDT 414
            LIA        +    M   G +   +        +++   W P G  L+ +   D   
Sbjct: 128 RLIATCGRDRSVWIWESMP--GREFECVDVKQGHTQDVKVVRWHPGGELLVSAGYDD--- 182

Query: 415 GSKLYSIDLN 424
             KL+S D +
Sbjct: 183 TIKLWSYDGD 192



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/222 (13%), Positives = 62/222 (27%), Gaps = 30/222 (13%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--------- 257
                  ++   +SP    +A  + D    +R++       +  ++              
Sbjct: 12  LTGHQDRVWSVAWSPKGDLLASCSGD--KTVRIWQHPAGGVQQQQQQQQQWYCCAILDQC 69

Query: 258 --SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS---ASYSPD 312
               I    +S NG+    +   D  + I+   L     E++             +++PD
Sbjct: 70  HSRTIRNIAWSPNGRALA-TASFDATVAIWE--LSGGVWEQVAELEGHENEVKCTAWNPD 126

Query: 313 SSQIVFESDREGKEQLY-VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
              I     R+    ++  M     +   + Q          W P G+L+    +     
Sbjct: 127 GRLIATC-GRDRSVWIWESMPGREFECVDVKQGHTQDVKVVRWHPGGELLVSAGYDDT-I 184

Query: 372 AIGVMKKD--------GSQERLLVEDSNLQAPTWSPSGRSLI 405
            +     D        G         S +    W P G+ L 
Sbjct: 185 KLWSYDGDEWGCSQTLGGYGPGSGHSSTVWDVCWDPPGQRLA 226


>gi|224121218|ref|XP_002318528.1| predicted protein [Populus trichocarpa]
 gi|222859201|gb|EEE96748.1| predicted protein [Populus trichocarpa]
          Length = 328

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 35/274 (12%), Positives = 82/274 (29%), Gaps = 51/274 (18%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                 E RLWD+     +  ++F         +A +               F++R +  
Sbjct: 81  SGSWDGELRLWDLATG--VSARRFVGHTKDVLSVAFS---------------FDNRQIVS 123

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +    +  + N+L         I+      D +    RFSP+  +    +   +  ++V+
Sbjct: 124 ASRDKTIKLWNTLGECKYT---IQEAESHTDWVSCV-RFSPSTLQPTIVSASWDKTVKVW 179

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
             +    +    +      +     S +G     S  KD  + ++ +  +      L   
Sbjct: 180 --NLTNCKLRSTLAGHSGYVNTVAVSPDGSLCA-SGGKDGVILLWDL-AEGKKLYSLDAG 235

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQS--------------------NGSDQKR 340
             IN    +SP+   +   ++      + +                        G+    
Sbjct: 236 AVINA-LCFSPNRYWLCAATENS----IKIWDLESKMVVDDLKVDLKAEAEKSEGTTATA 290

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +S  K+       WS  G  + F+ ++     + 
Sbjct: 291 VSTKKKIYCTSLNWSADGSTL-FSGYTDGVIRVW 323


>gi|149198654|ref|ZP_01875698.1| WD40 repeat protein [Lentisphaera araneosa HTCC2155]
 gi|149138369|gb|EDM26778.1| WD40 repeat protein [Lentisphaera araneosa HTCC2155]
          Length = 566

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 38/229 (16%), Positives = 71/229 (31%), Gaps = 24/229 (10%)

Query: 224 QKVAYATYDDEDILRVYLMDTRI--DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  A+   + +    +      +      +  G  RSM  +P FS         + K   
Sbjct: 127 KNDAFKASESKKGQVIMPQQLNLIPWHFHQHHGPARSMAASP-FSP---LIAFGLYK--Q 180

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + +Y  D Q      L          S+S D   ++      G E   V+    S  +  
Sbjct: 181 VSLYHSDTQ-KLLGYLDFPEGNINDLSFSADGQYLLAAGGHIGNEGFCVIWHVNSGCRIF 239

Query: 342 SQDKEA-SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT---W 397
           +   +         SP   L+A          I +   +  +  L+ E ++ +  +   +
Sbjct: 240 TLKHDPMDVHVAHISPDMKLLAIGSNDK---KIKIYSLENKEL-LIEEKAHSEWVSALRF 295

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLN--GRNETLINTPAYASDPQWVG 444
           SP+G+ L       GD   ++   D     +  TL       S   W  
Sbjct: 296 SPNGKYLA-----SGDRNGQIIIWDAQELSKLHTLYKHKGRISAISWRP 339



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/204 (12%), Positives = 58/204 (28%), Gaps = 11/204 (5%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQ 224
                 G   S        +++  +   + +   D   +       +  + +  FS + Q
Sbjct: 153 HFHQHHGPARSMAASPFSPLIAFGLYKQVSLYHSDTQKLLGYLDFPEGNINDLSFSADGQ 212

Query: 225 KVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDI 284
            +  A     +     +           + +    +     S + K   I    D+ + I
Sbjct: 213 YLLAAGGHIGNEGFCVIWHVNSGCRIFTLKHDPMDVHVAHISPDMKLLAI-GSNDKKIKI 271

Query: 285 YSVDLQSNATERLTNTLF---INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           YS++      E L           +  +SP+   +    DR G  Q+ +  +    +   
Sbjct: 272 YSLE----NKELLIEEKAHSEWVSALRFSPNGKYLA-SGDRNG--QIIIWDAQELSKLHT 324

Query: 342 SQDKEASYFDPVWSPQGDLIAFTK 365
               +       W P   + A + 
Sbjct: 325 LYKHKGRISAISWRPDSKVFASSS 348


>gi|148224790|ref|NP_001089826.1| hypothetical protein LOC734892 [Xenopus laevis]
 gi|80477565|gb|AAI08506.1| MGC130867 protein [Xenopus laevis]
          Length = 588

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/159 (14%), Positives = 53/159 (33%), Gaps = 11/159 (6%)

Query: 214 LFEPRFSPNQQ--KVAYATYDDEDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGK 270
              P +  +     + +A+   +   R++  D      P RI     S +   +F  N  
Sbjct: 382 HTYPVWDLDVSPCSLFFASASHDRTGRLWCFD---RTFPLRIYAGHLSDVDCIKFHPNSN 438

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
               +   D+ + ++S   Q N+    T      ++ ++SP+   +         ++L +
Sbjct: 439 YLA-TGSTDKTVRLWSTQ-QGNSVRLFTGHRGPVLTLAFSPNGKYLA---SAGEDQRLRL 493

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
                    +  +    +     +SP  +LIA       
Sbjct: 494 WDLASGTLYKELRGHTDNISSLTFSPDSNLIASGSMDNS 532



 Score = 41.9 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 55/204 (26%), Gaps = 18/204 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++   F  +   +   + D      +   +                +     
Sbjct: 336 ILRGHSGPVYRTCFLSDSSGLLSCSEDT----SIRYWNLESYTNTVLYQGHTYPVWDLDV 391

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDRE 323
           S         S   D    ++  D       R+      ++    + P+S+ +   S   
Sbjct: 392 SP--CSLFFASASHDRTGRLWCFDRTF--PLRIYAGHLSDVDCIKFHPNSNYLATGST-- 445

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 446 -DKTVRLWSTQQGNSVRLFTGHRGPVLTLAFSPNGKYLA---SAGEDQRLRLWDLASGTL 501

Query: 384 --RLLVEDSNLQAPTWSPSGRSLI 405
              L     N+ + T+SP    + 
Sbjct: 502 YKELRGHTDNISSLTFSPDSNLIA 525



 Score = 41.5 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 437 SNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLTLAFSPNGKYLASAGEDQ----RLR 492

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 493 LWDLASGTLYKELRGHTDNISSLTFSPDSNLIA-SGSMDNSVRVWDI 538


>gi|1332717|gb|AAB36056.1| acylamino acid-releasing enzyme, AARE {EC 3.4.19.1} [swine, liver,
           Peptide, 732 aa]
 gi|1583737|prf||2121361A acyl-AA releasing enzyme
          Length = 732

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 62/188 (32%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D +  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 224 LCVLDIESGNISVLEGVPESVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRFCTNRRSALY 283

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNA-- 293
            +D    +  + + +    + +PR S +  R +               +   D  +    
Sbjct: 284 YVDLTGGKC-ELLSDESVAVTSPRLSPDQCRIVYLRFPSLVPHQQCGQLCLYDWYTRVTS 342

Query: 294 ------TERLT-NTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  +   I  S      +S DS ++VF+S +  ++ L+ + +       ++
Sbjct: 343 VVVDIVPRQLGEDFSGIYCSLLPLGCWSADSQRVVFDSPQRSRQDLFAVDTQMGSVTSLT 402

Query: 343 QDKEASYF 350
                  +
Sbjct: 403 AGGSGGSW 410



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 39/143 (27%), Gaps = 21/143 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ---- 327
                 +     +Y VDL     E L++      S   SPD  +IV+             
Sbjct: 272 IRFCTNR--RSALYYVDLTGGKCELLSDESVAVTSPRLSPDQCRIVYLRFPSLVPHQQCG 329

Query: 328 ---LYVMQSNGSD------QKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIG 374
              LY   +  +        +++ +D    Y        WS     + F      +  + 
Sbjct: 330 QLCLYDWYTRVTSVVVDIVPRQLGEDFSGIYCSLLPLGCWSADSQRVVFDSPQRSRQDLF 389

Query: 375 VMKKDGSQERLLVEDSNLQAPTW 397
            +         L    +    +W
Sbjct: 390 AVDTQMGSVTSLTAGGSGG--SW 410


>gi|328883413|emb|CCA56652.1| putative peptidase [Streptomyces venezuelae ATCC 10712]
          Length = 612

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 14/165 (8%)

Query: 262 APRFS--------SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
           APR S         +  R+L         ++Y+ D  S    ++T+        + +PD 
Sbjct: 22  APRVSLPEWAEEAPD--RSLFVSNATGTYELYAWDRASGEQRQVTDRPNGTTDGTLTPDG 79

Query: 314 SQIVFESDREGKEQLYVM--QSNGSDQKRISQDKEASYFDP-VWSPQGDLIAFTKFSGEK 370
           S I + +D +G E    M     G   +      +ASY         G ++       + 
Sbjct: 80  SWIWWFADTDGDEFGVWMRQPFGGGADEPAVPGLDASYPAGLAIGRDGTVVVGRSTDEDG 139

Query: 371 FAIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDT 414
             + +++        +     +      S  G  +     + GD 
Sbjct: 140 TTVHLVRPGADAPVEIYRHRESAGVGDLSHDGALIAIEHTEHGDA 184



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 53/201 (26%), Gaps = 16/201 (7%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
             +         L D           +    + A  +  +G   LI    +   +++  +
Sbjct: 231 VGHQRRGRWEPMLWDVAAGTETDLALDLPGDVSA-EWYPDGSGLLIVHSFEARSELWRYE 289

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
           + + A  R+         A+  PD S     S         V  ++G     +  D    
Sbjct: 290 IATGALVRVETPAGSVSEATARPDGSVEYLWSSAAEPP--VVRSTDGG----VVLDPPGP 343

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
              P   P  D   + +  G +    V +  G              P W        F+ 
Sbjct: 344 KAPPSV-PVED--VWVEGPGGRVHALVQRPAGEGP-FPTVFEVHGGPAWH-DSD--AFAS 396

Query: 409 KKDG--DTGSKLYSIDLNGRN 427
                 D G  +  ++  G  
Sbjct: 397 GPAAWVDHGYAVVRVNYRGST 417



 Score = 37.3 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 26/84 (30%), Gaps = 1/84 (1%)

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-TWSPSGRSLIFSRKKDGDTGSK 417
           D   F   +   + +    +   ++R + +  N     T +P G  + +    DGD    
Sbjct: 36  DRSLFVSNATGTYELYAWDRASGEQRQVTDRPNGTTDGTLTPDGSWIWWFADTDGDEFGV 95

Query: 418 LYSIDLNGRNETLINTPAYASDPQ 441
                  G  +        AS P 
Sbjct: 96  WMRQPFGGGADEPAVPGLDASYPA 119


>gi|328707863|ref|XP_001950559.2| PREDICTED: aladin-like [Acyrthosiphon pisum]
          Length = 536

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 69/200 (34%), Gaps = 15/200 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS--NGKRAL-- 273
            + P   K+A  +    DI+ VY       +  ++    ++ IL+  +     G  A+  
Sbjct: 176 AWHPQVTKLAIVSSH--DIVYVYNRKGSEAKIKRK---SQNAILSLAWRPLSVGTLAVGC 230

Query: 274 ---ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
              I +   E  +I+     +N  + + +        S++     ++  S     + +Y+
Sbjct: 231 EKGIFIWTIEFSNIHVRPTVNNVCKFVRDDHRYITGLSWNKMGDLLI--SSAVTSKTMYI 288

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
                     +      +     WSP    + F+  + E F I       S +  L   S
Sbjct: 289 WNYPLETCVPLRSISSDTLNFVHWSPDNTKV-FSCSTSETFRIWSTDNWTSDKWSLNNRS 347

Query: 391 NLQAPTWSPSGRSLIFSRKK 410
            +Q   WSP    L+F+   
Sbjct: 348 RVQCACWSPCSLVLLFATDS 367


>gi|323456772|gb|EGB12638.1| hypothetical protein AURANDRAFT_51986 [Aureococcus anophagefferens]
          Length = 1228

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 65/192 (33%), Gaps = 30/192 (15%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVD--------LQSNATERLTNTLFINISA------SY 309
            ++ +      S   D  + +  +D           +    L+    +          ++
Sbjct: 45  AWNPDHGWIA-SGGDDGLLKVLKLDSPRDVGKAPGGSVPSNLSMNQTLEGHHGSVMCVTW 103

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           + +  ++   SD+ G   ++++      ++ I+   ++      W+  G  I      G 
Sbjct: 104 NANYRKLT-TSDQNGLIIVWMLHKGVWFEEMINNRNKSVVRAMKWTADGQKICIVYEDG- 161

Query: 370 KFAIGVMKKDGSQER---LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             A+ V   DG++     L    +N++   WSP    ++F         S+L+  DL G 
Sbjct: 162 --AVIVGSVDGNRLWGKDLTCGLTNVE---WSPDANYILFVTS-----DSELHMYDLMGS 211

Query: 427 NETLINTPAYAS 438
               I T     
Sbjct: 212 KVKTIPTGGDGG 223


>gi|313212365|emb|CBY36354.1| unnamed protein product [Oikopleura dioica]
 gi|313224276|emb|CBY20065.1| unnamed protein product [Oikopleura dioica]
          Length = 310

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 51/270 (18%), Positives = 86/270 (31%), Gaps = 38/270 (14%)

Query: 119 EGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH-------TISDDI--------- 162
              D + + +R  D    K +  KK+    A + K  H        ++DDI         
Sbjct: 40  SDDDSITI-YRTRDGTKAKTVYSKKYGVENARFTKRPHQCIYSSNKVNDDIRHQEIEQIK 98

Query: 163 ---YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
              Y S   ++         + E  +SG    ++ + D      + L  +    +    F
Sbjct: 99  YIKYFSGHKDRVVCLEMCPGMEEMFLSGSRDRTIRLWDLRSPLCQGLMKTNGTPIG--AF 156

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-----SSNGKRALI 274
            P    + +A   D   +R  L D R       +           +     S++G + LI
Sbjct: 157 DPAG--LIFAAGIDNSTIR--LFDIRTFDKGPYVSWHIPKTSDAVWTNLEFSADGTQILI 212

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           +   +    I +         R TN       A YSPD S IV   D  G   LY   + 
Sbjct: 213 TTSGETLKIIDAYKGDLIGEARCTNGK--MTKACYSPDGSMIV-AGDDNGTVTLY--DNK 267

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           G    R+      +     ++P    +  T
Sbjct: 268 GHTLSRMDGRHPQAINAIAFNP--RYMMMT 295


>gi|256839115|ref|ZP_05544625.1| dipeptidyl peptidase IV [Parabacteroides sp. D13]
 gi|256740034|gb|EEU53358.1| dipeptidyl peptidase IV [Parabacteroides sp. D13]
          Length = 804

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 22/180 (12%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNT--LFINISASYSPDSSQIVFESDREGK 325
           + +    S++       +S D  S+   R+T          A+ SPD  ++VF  D    
Sbjct: 119 DDRTFTFSIKGTNGNYFFSYDYPSSRLTRITKDEIPAKIRWANISPDKKRVVFAKD---- 174

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             LYVM     + K +   ++ +  +   +  G+           F  G+ +   + + L
Sbjct: 175 LNLYVMSYEDYE-KAVKDPEDKTISEIALTTDGEK---------DFGFGIPRTFLNTDTL 224

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT-----PAYASDP 440
                      WSP GR  + +   D      L+ I+   +    + T     P  A  P
Sbjct: 225 CDHKRKYVMGNWSPDGRYFV-ATLSDQREVQDLWVINSIAKPRPTLETYKYQMPGEAGSP 283



 Score = 43.5 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 29/252 (11%), Positives = 79/252 (31%), Gaps = 20/252 (7%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N   L   + + +    +SP+ +       D  ++  ++++++     P  +  ++  + 
Sbjct: 220 NTDTLCDHKRKYVMG-NWSPDGRYFVATLSDQREVQDLWVINSIAKPRPT-LETYKYQMP 277

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-----FINISASYSPDSSQI 316
               S      L  ++         VD   +    L +        +  ++ +  D+   
Sbjct: 278 GEAGSPIVHLYLFDLENAGKRKEIRVDCFKDQIINLASKPDKERMGLTRNSIWLGDNQTF 337

Query: 317 VFE--SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---VWSPQGDLIAFTKFSGEKF 371
                S    +  +          K I +++  +  +      +  G  +          
Sbjct: 338 YLTRVSRDMKRVDICSYTIGEDSVKAIIEERLNTSMETRPLAMTDNGKELIHWSERDGWA 397

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-SLIFS---RKKDGDTGS---KLYSIDLN 424
            + +    G+ +  + +             R  +++     ++ GDT      LY ++L+
Sbjct: 398 HLYLYDAQGNLKNRITKGPWHVDAIVDVDSRNRVVYFKANAREKGDTTPYYEHLYRVNLD 457

Query: 425 GRNETLINTPAY 436
           G    LI TP  
Sbjct: 458 GSGLKLI-TPGD 468



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/155 (17%), Positives = 58/155 (37%), Gaps = 17/155 (10%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDR 322
           R S + KR  I         + ++       ERL     +     + + +  +++  S+R
Sbjct: 341 RVSRDMKRVDICSYTIGEDSVKAI-----IEERL--NTSMETRPLAMTDNGKELIHWSER 393

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-------AIGV 375
           +G   LY+  + G+ + RI++             +  ++ F   + EK         +  
Sbjct: 394 DGWAHLYLYDAQGNLKNRITKGPWHVDAIVDVDSRNRVVYFKANAREKGDTTPYYEHLYR 453

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSR 408
           +  DGS  +L+         +   S R ++  +SR
Sbjct: 454 VNLDGSGLKLITPGDYFHLVSMDKSMRYIVDNYSR 488


>gi|56459827|ref|YP_155108.1| dipeptidyl peptidase IV [Idiomarina loihiensis L2TR]
 gi|56178837|gb|AAV81559.1| Dipeptidyl peptidase IV [Idiomarina loihiensis L2TR]
          Length = 827

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 25/198 (12%), Positives = 64/198 (32%), Gaps = 15/198 (7%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
              D   I++     +  +    +    + +A      + ++    +             
Sbjct: 370 WGWDNGAIQWNAEGTEVAVMLEAWDNKDRWLATVDTAGKKLVSQDRLHDDAWINYTH-NE 428

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
           F  +  +              + D    +Y+  +   +T +LT   ++  SA  +     
Sbjct: 429 FGWLNSS--------ELWFMSEADGYSQLYATSIDG-STRQLTKGHYVVESADLNRSGDY 479

Query: 316 IVFESD--REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFA 372
           + F+++    G  ++Y ++++GS +     D +        SP+ D +  T  +      
Sbjct: 480 LYFQANIEHPGIYEVYRVKTDGSGEPEALTDLDG-MTAFELSPESDELLLTHSTPLMPPE 538

Query: 373 IGVMKKDGSQ-ERLLVED 389
           +     D SQ  + L   
Sbjct: 539 LYHKAVDSSQTPKRLTHT 556



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 18/139 (12%), Positives = 50/139 (35%), Gaps = 7/139 (5%)

Query: 297 LTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           L +    +  A  ++ + +++    +    +  ++   + + +K +SQD+        ++
Sbjct: 366 LMSDWGWDNGAIQWNAEGTEVAVMLEAWDNKDRWLATVDTAGKKLVSQDRLHDDAWINYT 425

Query: 356 PQ------GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                      + F   +     +     DGS  +L      +++   + SG  L F   
Sbjct: 426 HNEFGWLNSSELWFMSEADGYSQLYATSIDGSTRQLTKGHYVVESADLNRSGDYLYFQAN 485

Query: 410 KDGDTGSKLYSIDLNGRNE 428
            +     ++Y +  +G  E
Sbjct: 486 IEHPGIYEVYRVKTDGSGE 504


>gi|47221040|emb|CAG12734.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 655

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 6/100 (6%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + P  + I       G+   +V+ ++  D   +  D +    +  +SP G+ +A +    
Sbjct: 433 FHPSGAVIA-VGTMTGRW--FVLDADTHDLVSMHTDGDEIISNVKFSPDGNFLAVSSHDN 489

Query: 369 EKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLI 405
             +   V +      R+       S +    WS   R LI
Sbjct: 490 FVYIYAVTENGRKYSRVGKCTGHSSFITHVDWSKDSRYLI 529



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 21/147 (14%), Positives = 49/147 (33%), Gaps = 24/147 (16%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           +  LWD    + +  K                         G    F+     ++   ++
Sbjct: 407 QVHLWDTNSHQPLWSKTIEDP--------------------GRCAGFHPSGAVIAVGTMT 446

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G       V+D D  ++  +    D+I+   +FSP+   +A +++D+   +     + R 
Sbjct: 447 GRW----FVLDADTHDLVSMHTDGDEIISNVKFSPDGNFLAVSSHDNFVYIYAVTENGRK 502

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRAL 273
                +     S I    +S + +  +
Sbjct: 503 YSRVGKCTGHSSFITHVDWSKDSRYLI 529



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 18/135 (13%)

Query: 301 LFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
             ++I  +      Q V  S DR    Q+++  +N S Q   S+  E       + P G 
Sbjct: 388 WGLDIHPTM----EQFVTCSQDR----QVHLWDTN-SHQPLWSKTIEDPGRCAGFHPSGA 438

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSK 417
           +IA    +G  F   V+  D      +  D +  +    +SP G  L  S     D    
Sbjct: 439 VIAVGTMTGRWF---VLDADTHDLVSMHTDGDEIISNVKFSPDGNFLAVSSH---DNFVY 492

Query: 418 LYSIDLNGRNETLIN 432
           +Y++  NGR  + + 
Sbjct: 493 IYAVTENGRKYSRVG 507


>gi|110637614|ref|YP_677821.1| metalloprotease [Cytophaga hutchinsonii ATCC 33406]
 gi|110280295|gb|ABG58481.1| conserved hypothetical protein; possible metalloprotease [Cytophaga
           hutchinsonii ATCC 33406]
          Length = 1031

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 94/280 (33%), Gaps = 39/280 (13%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            S  +   + A   Y T +   +  +P  + +   +AY       +  +YL         
Sbjct: 641 YSTKLYRINTATQAYATINTSSVFNKPSITDDGS-MAYFVNTANQLKSLYL---TPGNTY 696

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL-----TNTLFINI 305
           ++I     +      S NGKR   +   D+   +Y  D  S+   +      T +  I  
Sbjct: 697 EQIIQDEPIWNNVAISKNGKRLA-ATTTDKDTSVYVYDFDSDTWAQFVLYNPTYSEGIKS 755

Query: 306 SA-------SYSPDSSQIV------FESDREGKEQLYVMQS------------NGSDQKR 340
                     +      +V      FE+        + +              +G+  K 
Sbjct: 756 GGPIYADALEWDHTGEFLVYDCYNEFENTSGNNINFWDINFIQVWDNTLNDFGDGTVTKL 815

Query: 341 ISQDKEA-SYFDPVWSPQG-DLIAFTKFSGEKFAIGVM--KKDGSQERLLVEDSNLQAPT 396
            S   +  S  +P ++    ++IAF     ++  + V+    + ++  ++   + L  P 
Sbjct: 816 FSSLPDHISVGNPAFAKNSTNIIAFDYIDEDEGDLYVIGCNTETNELDVITSSNVLGFPN 875

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAY 436
           ++     + +  + + D    ++++DL+    T +   + 
Sbjct: 876 FNRLDNKIAYLYELNSDHMKSIWTVDLDESKITALPNGSD 915


>gi|301632613|ref|XP_002945376.1| PREDICTED: uncharacterized WD repeat-containing protein
           alr2800-like [Xenopus (Silurana) tropicalis]
          Length = 524

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 41/216 (18%), Positives = 71/216 (32%), Gaps = 20/216 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYD----------DEDILRVYLMDTRIDRAP 250
            N   +       ++E  FSP+ Q +A A+ D          DED +          +  
Sbjct: 157 GNCVEVLTQHKTDVWELAFSPDGQMLASASSDGSVVLWQIELDEDAMSYEHSAQLSSKPL 216

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             + +         +S + +  L S  +   + ++   +     +R  +   +     + 
Sbjct: 217 HVLQSLEGPADCLAWSPDSRFLLSSGSRSSTIQLWD-RMSGLCEKRFQHPGGVVTKMRWL 275

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P + Q  F S    K  L +  ++ S    I Q       D V  P    + F   S   
Sbjct: 276 PCAGQ--FVSGSADKS-LVLWNADESSI--IYQWSGRRVLDVVVHPHESKV-FVLIS--A 327

Query: 371 FAIGVMKKD-GSQERLLVEDSNLQAPTWSPSGRSLI 405
           F I        S E LL  +  +     S SGR L+
Sbjct: 328 FEIRAYDVALRSDELLLEAEHAISCLNISSSGRFLL 363



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 34/97 (35%), Gaps = 14/97 (14%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ-------------SN 292
                + +   ++ +    FS +G+    S   D ++ ++ ++L              S 
Sbjct: 156 TGNCVEVLTQHKTDVWELAFSPDGQMLA-SASSDGSVVLWQIELDEDAMSYEHSAQLSSK 214

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
               L +        ++SPDS  ++    R    QL+
Sbjct: 215 PLHVLQSLEGPADCLAWSPDSRFLLSSGSRSSTIQLW 251



 Score = 40.4 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 29/98 (29%), Gaps = 13/98 (13%)

Query: 289 LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN------------GS 336
           +  N  E LT         ++SPD   +   S  +G   L+ ++ +             S
Sbjct: 155 VTGNCVEVLTQHKTDVWELAFSPDGQMLASASS-DGSVVLWQIELDEDAMSYEHSAQLSS 213

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
               + Q  E       WSP    +  +        + 
Sbjct: 214 KPLHVLQSLEGPADCLAWSPDSRFLLSSGSRSSTIQLW 251


>gi|187779625|ref|ZP_02996098.1| hypothetical protein CLOSPO_03221 [Clostridium sporogenes ATCC
           15579]
 gi|187773250|gb|EDU37052.1| hypothetical protein CLOSPO_03221 [Clostridium sporogenes ATCC
           15579]
          Length = 1474

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 61/176 (34%), Gaps = 36/176 (20%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L     ++   IY +       + L      + +A+Y   S  +V+ +++  K +LY + 
Sbjct: 399 LYCSNYNDNGKIYKMKKDGTKKQIL-----CDDTATYITVSGGVVYYANQSDKGRLYKIN 453

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           ++G      + D  AS  DP               G+   + VM  D        + +N 
Sbjct: 454 TDG------TIDGGASNRDPA--------------GKVHGMPVMD-DYGNYNKATDQANF 492

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINT---PAYASDPQWVGF 445
                   G  + +S   DG    K+Y+++ +G     +N            W  +
Sbjct: 493 INVV----GDWIYYSNFSDGH---KIYTVNKDGNIRRKVNDEWADGIQIVGAWAYY 541



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 57/144 (39%), Gaps = 22/144 (15%)

Query: 304 NISASYSPDSSQI------VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           N + + S + S        V+  +   K  LY     G    +IS DK            
Sbjct: 341 NTAGNISNNGSAAMDLDFYVYYVNSADKNSLYRKTLTGRMDTQISLDKAQYINVI----- 395

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           GD + +     +   I  MKKDG+++++L +D+         SG  + ++ + D     +
Sbjct: 396 GDWL-YCSNYNDNGKIYKMKKDGTKKQILCDDTATYITV---SGGVVYYANQSD---KGR 448

Query: 418 LYSIDLNGRNETLINTPAYASDPQ 441
           LY I+ +G     I+  A   DP 
Sbjct: 449 LYKINTDGT----IDGGASNRDPA 468


>gi|148545655|ref|YP_001265757.1| peptidase S9 prolyl oligopeptidase [Pseudomonas putida F1]
 gi|148509713|gb|ABQ76573.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Pseudomonas putida F1]
          Length = 607

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 42/95 (44%), Gaps = 4/95 (4%)

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              +VF ++++  +Q+Y    + S  + ++ D    Y D  W   G ++A  +   E+  
Sbjct: 83  GDGLVFVNEKD--QQVYTQPLDDSLPRALTHDVSCRYGDVQWH-DGQVLAVEERHAEQVE 139

Query: 373 IGVMKKDGSQERLLVEDSNLQ-APTWSPSGRSLIF 406
             ++    S   +L E ++   +P  S  G+ L +
Sbjct: 140 HRLIALGDSSREVLAEGADFYASPAVSADGQRLAW 174


>gi|218262531|ref|ZP_03476952.1| hypothetical protein PRABACTJOHN_02630 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223317|gb|EEC95967.1| hypothetical protein PRABACTJOHN_02630 [Parabacteroides johnsonii
           DSM 18315]
          Length = 1082

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 22/149 (14%), Positives = 52/149 (34%), Gaps = 19/149 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG-NFRSMILA-PRFSSNGKRALISVQK- 278
           +  ++ +++ D++   ++Y + T      ++I  +   +      +  +GK    +    
Sbjct: 165 DADRLLFSSLDEKRKWQIYEIKTDGSGLHQKITVDEPDLEFCDANYLPDGKVVATTNIGY 224

Query: 279 ---------DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
                    D   ++ S D ++ A  RLT     N S    P+   +    +       +
Sbjct: 225 NGVPCVHGDDVVANLISFDPETRALRRLTFDQDGNWSPIVIPNGRIMYTRWEYTDLTHYF 284

Query: 330 -----VMQSNGSDQKRISQDKEASYFDPV 353
                 M  +G++ K +      SYF   
Sbjct: 285 SRIVMHMNPDGTENKALY--GSGSYFPNS 311



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 23/180 (12%), Positives = 55/180 (30%), Gaps = 27/180 (15%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
                R  K   +     +   + ++ +    S+ +     IY +    +   +      
Sbjct: 142 QIESGRIYKPEADVPLSDIQLHWDAD-RLLFSSLDEKRKWQIYEIKTDGSGLHQKITVDE 200

Query: 303 INIS---ASYSPDSSQIVFES-DREGKE---------QLYVMQSNGSDQKRISQDKEASY 349
            ++    A+Y PD   +   +    G            L          +R++ D++ ++
Sbjct: 201 PDLEFCDANYLPDGKVVATTNIGYNGVPCVHGDDVVANLISFDPETRALRRLTFDQDGNW 260

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIG------VMKKDGSQERLLVEDSNLQAPTWSPSGRS 403
              V  P G  I +T++               M  DG++ + L         ++ P+   
Sbjct: 261 SPIVI-PNGR-IMYTRWEYTDLTHYFSRIVMHMNPDGTENKALYGSG-----SYFPNSTF 313



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 58/142 (40%), Gaps = 19/142 (13%)

Query: 312 DSSQIVFES-DREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPV-WSPQGDLIAFTKFSG 368
           D+ +++F S D + K Q+Y ++++GS   + I+ D+    F    + P G ++A T    
Sbjct: 165 DADRLLFSSLDEKRKWQIYEIKTDGSGLHQKITVDEPDLEFCDANYLPDGKVVATTNIGY 224

Query: 369 EKF----------AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRKKDGDTG-- 415
                         +     +    R L  +     +P   P+GR ++++R +  D    
Sbjct: 225 NGVPCVHGDDVVANLISFDPETRALRRLTFDQDGNWSPIVIPNGR-IMYTRWEYTDLTHY 283

Query: 416 -SKLYS-IDLNGRNETLINTPA 435
            S++   ++ +G     +    
Sbjct: 284 FSRIVMHMNPDGTENKALYGSG 305


>gi|308198011|ref|XP_001386779.2| predicted protein [Scheffersomyces stipitis CBS 6054]
 gi|149388814|gb|EAZ62756.2| predicted protein [Pichia stipitis CBS 6054]
          Length = 935

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 65/174 (37%), Gaps = 11/174 (6%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +++ +     +L VY   +      K+ G+F SM  A  +S +G R +++   D  
Sbjct: 313 SGEWLSFGSAKLGQLL-VYEWQSE-SYILKQQGHFDSMN-ALCYSPDGSR-VVTASDDGK 368

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + I+ V +        T          ++    Q++F S  +G  + + +     + +  
Sbjct: 369 IKIWDV-ISGFCLMTFTEHTSSVTDVKFAKKG-QVLFSSSLDGTVRAWDL-IRFRNFRTF 425

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +  +   +      P G+++         F I V        +LL   +  + P
Sbjct: 426 TATERIQFNSLAVDPSGEVVVAGSQD--TFEIYVWSVQT--AQLLESLTGHEGP 475


>gi|148683656|gb|EDL15603.1| WD repeat and SOCS box-containing 1, isoform CRA_a [Mus musculus]
          Length = 244

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 34/80 (42%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   M+    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHIEMVRDLTFAPDGSLLLVSASRDKTLRVWDLKDDGNMVKVL 210

Query: 298 TNTLFINISASYSPDSSQIV 317
                   S ++SPD S + 
Sbjct: 211 RAHQNWVYSCAFSPDCSMLC 230


>gi|219847499|ref|YP_002461932.1| hypothetical protein Cagg_0557 [Chloroflexus aggregans DSM 9485]
 gi|219541758|gb|ACL23496.1| conserved hypothetical protein [Chloroflexus aggregans DSM 9485]
          Length = 382

 Score = 45.0 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 81/262 (30%), Gaps = 27/262 (10%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY------ATYDDEDIL 237
           VV     + L     DG N   +    D  L   R+SP+ Q +         T D  D L
Sbjct: 97  VVGDAQGDRLVRTSLDGDNPETVFFETDYQLSAVRWSPDAQFIYLHLQNNRTTRDRPDGL 156

Query: 238 RVY------LMDTRIDRAPKRIGNFRSMI--LAP-RFSSNGKRALISVQKDEAMDIYSV- 287
                    L   R D       N    +   AP  +  +G   +++       D   V 
Sbjct: 157 YRVPATGGTLELLRTDDPVDDPLNPSRSVRSYAPFLWEPSGDSLILASTATFYDDCELVF 216

Query: 288 -DLQSNATER--LTNTL-FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
              Q  A +   L + +      A +  D + ++     EG   ++ + +      R+S 
Sbjct: 217 WRPQDGALQHPVLPDGMQSWCGEAMWRSDQTALMLIGPPEG-PGVWQVDTRTLQATRLSA 275

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERLLVEDSNLQAP---TWSP 399
           +   +            IA  +      F +     DG      +     + P    W+P
Sbjct: 276 EGTLARAPFFNGTDLLFIAVDRVDDGFTFTLTRQLPDG--MVTPLRPPFREVPLLVRWAP 333

Query: 400 SGRSLIFSRKKDGDTGSKLYSI 421
            G  ++   + +  T  + Y I
Sbjct: 334 DGSGIVALVRTETGTSLRWYPI 355



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 54/149 (36%), Gaps = 22/149 (14%)

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL-----IAFTKFSGEK 370
            ++  DR    Q+  ++++G+ ++++++++      P  S   DL     + +     + 
Sbjct: 48  PLYILDRG---QIARIEADGATRRQLTRERIEFAGIPPIS-DMDLHPTAGLVYVVGDAQG 103

Query: 371 FAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIF---SRKKDGDTGSKLYSIDLNG 425
             +     DG     +    D  L A  WSP  + +     + +   D    LY +   G
Sbjct: 104 DRLVRTSLDGDNPETVFFETDYQLSAVRWSPDAQFIYLHLQNNRTTRDRPDGLYRVPATG 163

Query: 426 RNETLINTPAYASDP--------QWVGFM 446
               L+ T     DP         +  F+
Sbjct: 164 GTLELLRTDDPVDDPLNPSRSVRSYAPFL 192



 Score = 40.4 bits (93), Expect = 0.61,   Method: Composition-based stats.
 Identities = 22/158 (13%), Positives = 46/158 (29%), Gaps = 33/158 (20%)

Query: 280 EAMDIYSVDLQSNATERLTNTL----------FINISASYSPDSSQIVFESDREGKEQLY 329
           +   I  ++       +LT              +++  +     + +V+       ++L 
Sbjct: 53  DRGQIARIEADGATRRQLTRERIEFAGIPPISDMDLHPT-----AGLVYVVGDAQGDRLV 107

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-----IGVMKKDGSQER 384
               +G + + +  + +       WSP    I     +          +  +   G    
Sbjct: 108 RTSLDGDNPETVFFETDYQLSAVRWSPDAQFIYLHLQNNRTTRDRPDGLYRVPATGGTLE 167

Query: 385 LLVEDSNLQAP-------------TWSPSGRSLIFSRK 409
           LL  D  +  P              W PSG SLI +  
Sbjct: 168 LLRTDDPVDDPLNPSRSVRSYAPFLWEPSGDSLILAST 205


>gi|298241374|ref|ZP_06965181.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
            racemifer DSM 44963]
 gi|297554428|gb|EFH88292.1| serine/threonine protein kinase with WD40 repeats [Ktedonobacter
            racemifer DSM 44963]
          Length = 1295

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 32/267 (11%), Positives = 67/267 (25%), Gaps = 39/267 (14%)

Query: 121  KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                    RLW+V   + +  + F           HT  D +        G F       
Sbjct: 949  SGGYDRTLRLWEVATGRCL--RTFQG---------HT--DWVNSVCLSADGCFA------ 989

Query: 181  SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR-- 238
                +SG   N+L + +        +       +     S + +     + D+   +   
Sbjct: 990  ----LSGSKDNTLRLWEVATGRCLRIFQGHTDAVNSVCLSADGRFALSGSGDNGRPVNKT 1045

Query: 239  ------VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                  + L +       +        + +   S++G R  +S   D  + ++ V     
Sbjct: 1046 LPPDNTLRLWEVATGTCLRTFQGHTRRVTSVCLSADG-RFALSGSGDYTLRLWEV-ATGT 1103

Query: 293  ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
                     +   S   S D     F       + + + +          Q         
Sbjct: 1104 CLRTFQEHTYDVTSVCLSADGR---FALSGSADQTVRLWEVATGTCLHTFQGHTDWVKSV 1160

Query: 353  VWSPQGDLIAFTKFSGEKFAIGVMKKD 379
              S  G    F         + + + D
Sbjct: 1161 SLSADGR---FALSGSTNNNLWLWELD 1184



 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 29/192 (15%), Positives = 49/192 (25%), Gaps = 19/192 (9%)

Query: 241  LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            L D                + +  FS++G R  +S   D  + ++ V             
Sbjct: 916  LWDVITGDCLCTFQGHTGTVSSVCFSTDG-RFALSGGYDRTLRLWEV-ATGRCLRTFQGH 973

Query: 301  LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                 S   S D     F         L + +       RI Q    +      S  G  
Sbjct: 974  TDWVNSVCLSADG---CFALSGSKDNTLRLWEVATGRCLRIFQGHTDAVNSVCLSADGRF 1030

Query: 361  IAFTKFSGEKFAIGVMKKD----------GSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
                     +     +  D          G+  R        + +   S  GR   F+  
Sbjct: 1031 ALSGSGDNGRPVNKTLPPDNTLRLWEVATGTCLRTFQGHTRRVTSVCLSADGR---FALS 1087

Query: 410  KDGDTGSKLYSI 421
              GD   +L+ +
Sbjct: 1088 GSGDYTLRLWEV 1099


>gi|325920900|ref|ZP_08182795.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           gardneri ATCC 19865]
 gi|325548652|gb|EGD19611.1| dipeptidyl aminopeptidase/acylaminoacyl peptidase [Xanthomonas
           gardneri ATCC 19865]
          Length = 694

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 54/148 (36%), Gaps = 13/148 (8%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKF 366
           + SPD   + + +  EG   ++V   +  DQ R I++D      +  W+ Q + + + + 
Sbjct: 60  TISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPNTLLYLRD 119

Query: 367 SGE--KFAIGVMKKDGSQERLLV--EDSNLQAPTWS---PSGRSLIFSRKKDGDTGSKLY 419
            G    F +  +       + L   + +  +    S   P   S++            LY
Sbjct: 120 DGGDEDFHLFSVNLTDGSSKDLTPFKKTTAEMYRVSAQHP--ESIMVGMNDRDAKWHDLY 177

Query: 420 SIDLNGRNETLINTPAYASDPQWVGFMD 447
            +DL     TL+     + +      +D
Sbjct: 178 RVDLASGKRTLVQKNTDSLE---SYLLD 202



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 60/169 (35%), Gaps = 13/169 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLF---INISASYSPDSSQIVFE 319
             S +GK        +  ++++   + + +    +T        N   +Y P+   +++ 
Sbjct: 60  TISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPN--TLLYL 117

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIG 374
            D  G E   L+ +       K ++  K+ +      S   P+  ++       +   + 
Sbjct: 118 RDDGGDEDFHLFSVNLTDGSSKDLTPFKKTTAEMYRVSAQHPESIMVGMNDRDAKWHDLY 177

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSID 422
            +     + R LV+ +     ++   G   L ++ +   D G +L   D
Sbjct: 178 RVDLASGK-RTLVQKNTDSLESYLLDGDYRLRYATRATDDAGRELLVPD 225



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 8/94 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDS----NLQAPTWSP 399
                 +   SP G  +++         + V   D   Q R + +D+         T+ P
Sbjct: 52  GNPERANVTISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQP 111

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
           +  +L++ R   GD    L+S++L +G ++ L  
Sbjct: 112 N--TLLYLRDDGGDEDFHLFSVNLTDGSSKDLTP 143


>gi|313679372|ref|YP_004057111.1| wd40-like beta propeller containing protein [Oceanithermus
           profundus DSM 14977]
 gi|313152087|gb|ADR35938.1| WD40-like beta Propeller containing protein [Oceanithermus
           profundus DSM 14977]
          Length = 884

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 12/93 (12%)

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLIFS 407
            DPV SP G  +AF + SG    + V  +DGS  R L        P   W      LI+S
Sbjct: 289 RDPVLSPDGRRLAFVRRSG----VWVAARDGSGARRLA----PVHPQRLWWGDESILIYS 340

Query: 408 RK-KDGDT-GSKLYSIDLNGRNETLINTPAYAS 438
           R  ++GD   S ++++D+    ET +    +A 
Sbjct: 341 RYFREGDGVASDVFALDVATGRETRLTRGRHAR 373



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 49/174 (28%), Gaps = 46/174 (26%)

Query: 263 PRFSSNGKRALISVQ-------KDE----------------------------------A 281
           P  S +G+R     +       +D                                   A
Sbjct: 291 PVLSPDGRRLAFVRRSGVWVAARDGSGARRLAPVHPQRLWWGDESILIYSRYFREGDGVA 350

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            D++++D+ +    RLT      + A+  P+   + F  DR G+         G  ++  
Sbjct: 351 SDVFALDVATGRETRLTRGRHARL-AAPGPEGC-VYFVRDRAGEAAALGRWCAGRVEEVW 408

Query: 342 SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                        SP G  +A     G    + +   +G + R L        P
Sbjct: 409 RAPGGEHLVGLALSPGGR-VALAVAHGGVVDVAL--LEGGRLRYLAAGPLDVVP 459


>gi|312385050|gb|EFR29636.1| hypothetical protein AND_01234 [Anopheles darlingi]
          Length = 351

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 84/290 (28%), Gaps = 36/290 (12%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           +I+ +     GD      F          +  L  +  +  N+  L+      + E  FS
Sbjct: 61  EIFSTQFHPDGDHLLSTGF--------DRQIFLWTVYGECENVGVLS-GHSGAVMEAHFS 111

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+   V     D      V + D       +++      + +   +  G   ++S   D 
Sbjct: 112 PDGSNVYSCATDK----VVAVWDVPTCTRIRKLKGHTHFVNSCSGARRGPTLIVSGSDDS 167

Query: 281 AMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
           ++ I+     +     + T      ++A    D+++ V     +   ++ V      +  
Sbjct: 168 SIKIW----DARKRHVISTFDNTYQVTAVCFNDTAEQVISGGID--NEIKVWDIRKKEIV 221

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK--DGSQERLLVEDSNLQA--- 394
              +    +      SP G  +           I  ++    G +   +           
Sbjct: 222 YRLRGHTDTITGLSLSPDGSYVLSNSMDNT-LRIWDIRPYVPGERCVKVFNGHQHNFEKN 280

Query: 395 ---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE--TLINTPAYASD 439
                WSP G+ +       G +   +Y  D   R     L       +D
Sbjct: 281 LLRCAWSPDGQKI-----SAGSSDRYVYIWDTTSRRILYKLPGHNGSVND 325



 Score = 37.7 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 51/169 (30%), Gaps = 8/169 (4%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID----RAPKRIGNFRSMILAPRF 265
           R      P  S  + +    +Y  +D   +   + +           +      I + +F
Sbjct: 8   RPSDALVPVSSSKKSRTDLVSYTTKDKQLLEQQNVQRTSNLLGPIMLLEGHGGEIFSTQF 67

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
             +G   L S   D  + +++V  +      L+      + A +SPD S +   +     
Sbjct: 68  HPDGDHLL-STGFDRQIFLWTVYGECENVGVLSGHSGAVMEAHFSPDGSNVYSCAT---D 123

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           + + V       + R  +           + +G  +  +        I 
Sbjct: 124 KVVAVWDVPTCTRIRKLKGHTHFVNSCSGARRGPTLIVSGSDDSSIKIW 172


>gi|308475614|ref|XP_003100025.1| CRE-SWD-3.2 protein [Caenorhabditis remanei]
 gi|308266077|gb|EFP10030.1| CRE-SWD-3.2 protein [Caenorhabditis remanei]
          Length = 392

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 73/205 (35%), Gaps = 16/205 (7%)

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P +S +     +            LM        K +   +       FS +GK    S 
Sbjct: 70  PGYSSDSMPPPFIGAPVGAAPHYRLMAELKKAHTKSVSALK-------FSPDGKYLG-SS 121

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             D ++ +Y++   +     L + L IN  A +S DS QIV  +D    + L +     +
Sbjct: 122 SADGSVKLYNMATVTLEKILLGHKLGINDFA-WSSDSKQIVSGAD---DKILKIYDVLTA 177

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
              +  +   +  F   ++PQ  L+    F  E   I   +     + +      + A +
Sbjct: 178 QCVKNLKGHTSYVFCCNFNPQNTLVVSGSFD-ESIRIWCARNGTCIKTIPAHQDPVVAVS 236

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSI 421
           ++  G  +  S   DG    +++ +
Sbjct: 237 FNRDGNIIA-SGSYDG--FIRIWDV 258



 Score = 41.9 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 83/194 (42%), Gaps = 15/194 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +FSP+ + +  ++ D      V L +       K +   +  I    +SS+ K+ + S  
Sbjct: 110 KFSPDGKYLGSSSADG----SVKLYNMATVTLEKILLGHKLGINDFAWSSDSKQIV-SGA 164

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + IY V L +   + L          +++P ++ +V  S  +   +++  + NG+ 
Sbjct: 165 DDKILKIYDV-LTAQCVKNLKGHTSYVFCCNFNPQNTLVVSGSF-DESIRIWCAR-NGTC 221

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD-GSQERLLVED--SNLQA 394
            K I    +       ++  G++IA   + G    I +     G+  + LV++    +  
Sbjct: 222 IKTI-PAHQDPVVAVSFNRDGNIIASGSYDG---FIRIWDVARGTCSKSLVDEIKPPVSH 277

Query: 395 PTWSPSGRSLIFSR 408
             +SP+G+ ++ + 
Sbjct: 278 VKFSPNGKYILSAS 291



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 61/151 (40%), Gaps = 8/151 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S + +++   +  D+ IL++Y  D    +  K +    S +    F+      ++S  
Sbjct: 152 AWSSDSKQI--VSGADDKILKIY--DVLTAQCVKNLKGHTSYVFCCNFNPQ-NTLVVSGS 206

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            DE++ I+         + +       ++ S++ D + I   S  +G  +++ + + G+ 
Sbjct: 207 FDESIRIWCA-RNGTCIKTIPAHQDPVVAVSFNRDGNIIASGSY-DGFIRIWDV-ARGTC 263

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
            K +  + +       +SP G  I      G
Sbjct: 264 SKSLVDEIKPPVSHVKFSPNGKYILSASLDG 294


>gi|298711118|emb|CBJ32346.1| TFIID and SAGA subunit [Ectocarpus siliculosus]
          Length = 703

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/191 (16%), Positives = 58/191 (30%), Gaps = 24/191 (12%)

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--SNAT--ERLTNTLFINISA 307
           R+      +    +S +G+  L S   D  + ++ +       +    R           
Sbjct: 427 RLVGHSQPVYGVSWSPDGRFLL-SAGGDGGVRLWDIARGRVGGSAGYVRYDGHCGPVWDV 485

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++ P        SD        +  ++ +   RI            + P  + +      
Sbjct: 486 AFGPAGYYFATASD---DRTACLWSTDCASPLRIFAGHLKGVLCVTFHPNANYVVTGSMD 542

Query: 368 GEKFAIGVMKKDGSQ-ERLLV-EDSNLQAPTWSPSGR---SLIFSRKKDGDTGSKLYSI- 421
                + V         RLL     ++     SPSGR   S + S  KD     K++ + 
Sbjct: 543 KT---VRVWDVQTGDCVRLLAGHSGSVTCVAVSPSGRLEGSALVSGSKDNTV--KIWDVA 597

Query: 422 -----DLNGRN 427
                D +GRN
Sbjct: 598 SACKRDGDGRN 608



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 46/153 (30%), Gaps = 6/153 (3%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              Q ++   +SP+ + +  A  D    +  +            R       +    F  
Sbjct: 430 GHSQPVYGVSWSPDGRFLLSAGGDGGVRLWDIARGRVGGSAGYVRYDGHCGPVWDVAFGP 489

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
            G     +   D    ++S D  S         L   +  ++ P+++ +V  S     + 
Sbjct: 490 AGYYFA-TASDDRTACLWSTDCAS-PLRIFAGHLKGVLCVTFHPNANYVVTGSM---DKT 544

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           + V      D  R+      S      SP G L
Sbjct: 545 VRVWDVQTGDCVRLLAGHSGSVTCVAVSPSGRL 577


>gi|298373284|ref|ZP_06983273.1| dipeptidyl-peptidase IV [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274336|gb|EFI15888.1| dipeptidyl-peptidase IV [Bacteroidetes oral taxon 274 str. F0058]
          Length = 717

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 46/292 (15%), Positives = 89/292 (30%), Gaps = 47/292 (16%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT- 230
           D   RIL ++ S       +       D    R    S +       FSPN + VA+A  
Sbjct: 98  DSEGRILLLTNSRPVYRRSSIGSYYVYDINRRRITPVSENGAQTSATFSPNGRIVAFARD 157

Query: 231 ---YDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--------PRFSSNGKRALISVQKD 279
              +  +         T+  +  + I      +           +FS + K        +
Sbjct: 158 NNLFLKKLDFDTESQITKDGKKNELINGIADWVYEEEFANVQYFQFSPDNKLLAFVKFYE 217

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----LYVMQSNG 335
           + ++ +S+ L            F +            +F+  R G       ++V     
Sbjct: 218 KDVENFSMQL------------FTDTMPVL------QMFKYPRAGTNNSRVSVWVYDVEN 259

Query: 336 SDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVMK---KDGSQERLLVE--- 388
               R+  +    Y   + W+   D +A  K + ++  I ++    + G    L  E   
Sbjct: 260 RTTTRMKMEGTDFYIPIIKWTSSSDALAVVKLARDQKQIDIINYNPRSGLGATLYSESSK 319

Query: 389 ---DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
              D       ++     LI   +KDG     +Y     G  +  I +  + 
Sbjct: 320 TYVDYRNYNAIFTSDNSFLI-MSEKDGYR--HIYLHSPTGIQKQQITSGNFD 368



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 43/201 (21%), Positives = 76/201 (37%), Gaps = 38/201 (18%)

Query: 270 KRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFINISAS---YSPDSSQIVFESDRE 323
           KR  +S+        + I+S + +    E LT + +   S +      D  +  + SD  
Sbjct: 3   KRIFLSLAILLAMGNISIFSQNAE-KFLEELTTSQWKAKSPANVVSMRDGERFAYVSDN- 60

Query: 324 GKEQLYVMQSNGSDQKRI--------SQDKEASYFDPVWSPQGDLIAFTK-----FSGEK 370
            K+Q+ V     S  + I        S  K+  +F    S +G ++  T           
Sbjct: 61  -KKQIIVDYYKSSKPEVIFDVDKVEKSPVKQVEWFQFDDS-EGRILLLTNSRPVYRRSSI 118

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK-------DGDTGSKLYSIDL 423
            +  V   +  +   + E+    + T+SP+GR + F+R         D DT S++     
Sbjct: 119 GSYYVYDINRRRITPVSENGAQTSATFSPNGRIVAFARDNNLFLKKLDFDTESQI---TK 175

Query: 424 NGRNETLINTPAYASDPQWVG 444
           +G+   LIN  A      WV 
Sbjct: 176 DGKKNELINGIAD-----WVY 191


>gi|226226634|ref|YP_002760740.1| hypothetical protein GAU_1228 [Gemmatimonas aurantiaca T-27]
 gi|226089825|dbj|BAH38270.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 904

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 28/219 (12%), Positives = 63/219 (28%), Gaps = 18/219 (8%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +    +   + L+D R            + I AP +S  G           A   Y  D+
Sbjct: 119 SVTTSNRSGIELVDPRTGSTRALQVPAGASISAPVWSPTGSHVAFIANFPTASYAYVADV 178

Query: 290 QSNATERLTNTL---FINISASYSPDSSQIVFE---SDREGKEQLYVMQSNGSDQKRISQ 343
            +  + RL+             ++ D   +V     + R               Q R++ 
Sbjct: 179 NTGKSTRLSERPLLATFVTDLEFTGDGKHVVTVLVPTARGALPTHGAGDIEDGPQVRLT- 237

Query: 344 DKEASYFDPVWS-----PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           +  A      +S          + +         + ++       R +   + ++  + S
Sbjct: 238 ESRAVPQPVHFSLLKDPHDKAQLTYYTTG----QVALIDVRSKAVRNIGAPTMVRDLSAS 293

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
             G  +  +R    +  S L  ++  G  + L +     
Sbjct: 294 HDGAWVRVTRMV--EPFSYLVPVNNFGTVQELWDGTGKV 330


>gi|168702577|ref|ZP_02734854.1| peptidase S9, prolyl oligopeptidase active site region [Gemmata
           obscuriglobus UQM 2246]
          Length = 646

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 8/99 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEK-FAIGVMK----KDGSQERLLVED--SNLQAPTW 397
                  P  SP G  +A+     +    + V           +R +  D    ++   W
Sbjct: 32  GNPDRTAPQISPDGKHLAYLAPDAKNVLQVWVRSHPPQPGKPDDRAVTGDEKRGIRQYYW 91

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPA 435
           +  G+ L++ + K GD    LY+ +L  G+   L     
Sbjct: 92  AHDGKHLLYLQDKGGDENFHLYASELATGKTRDLTPFDG 130



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 39/250 (15%), Positives = 84/250 (33%), Gaps = 22/250 (8%)

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLM----DTRIDRAPKRIGNFRSMILAPRF 265
            +     P+ SP+ + +AY   D +++L+V++                G+ +  I    +
Sbjct: 32  GNPDRTAPQISPDGKHLAYLAPDAKNVLQVWVRSHPPQPGKPDDRAVTGDEKRGIRQYYW 91

Query: 266 SSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFE 319
           + +GK  L    K       +Y+ +L +  T  LT    + +       + PD+  +   
Sbjct: 92  AHDGKHLLYLQDKGGDENFHLYASELATGKTRDLTPFDGVRVEGVDLDEHHPDTVLVGLN 151

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF----TKFSGEKFAIGV 375
              +    ++ +  +   +K    D E       W+   D +             + + V
Sbjct: 152 KRNKAAFDMHRITISTGAEKL---DTENPGLIIGWTTDKDFVVRAATAVNTKTGGYDLMV 208

Query: 376 MKKDGSQ---ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLI 431
            +K G+     +    +   Q   +     +L        DT  +L  +DL  G+ E + 
Sbjct: 209 REKPGADWKVVKQWTNEEQGQPAAFGADANTLYVIGNDQTDTM-RLTKLDLATGKEEVVA 267

Query: 432 NTPAYASDPQ 441
             P       
Sbjct: 268 EDPTADVSGA 277


>gi|115442802|ref|XP_001218208.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114188077|gb|EAU29777.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 1338

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 45/257 (17%), Positives = 76/257 (29%), Gaps = 36/257 (14%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS-- 266
              +IL   R SP+        ++  + +  Y     I   P      + M+   ++S  
Sbjct: 104 GGKEILKTIRVSPDHSS---EEFNLRNAIISYSSTHHIANGPSARHKEQLMVRDVKWSHG 160

Query: 267 ----------SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
                     +NG+  L  + +        +   S    RL    F+    +Y    SQ 
Sbjct: 161 VYDQIIATAVANGRIVLYDLHRTGLEYCRFM-GHSRQVHRLAFNPFM---PTYLLSGSQ- 215

Query: 317 VFESDREGKEQLYVMQSNG-----SDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEK 370
               D   +     + S G     S  K +      +  D  WSP  G + A    SG  
Sbjct: 216 ----DSTVRMWDLRVPSTGRGVPVSGSKHLYNGNSDAVRDIRWSPKDGVVFATATDSGTV 271

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL 430
                        R+   D    +  W P G  L+       D   K++   +  R +  
Sbjct: 272 HIWDYRNPSAPMLRVTAHDRPCYSIDWHPDGTHLV---SGGTDRQVKVWDSSITDRRQKP 328

Query: 431 I---NTPAYASDPQWVG 444
                TP    + +W  
Sbjct: 329 TFQFRTPQAVMNVRWRP 345


>gi|157113647|ref|XP_001652036.1| wd-repeat protein [Aedes aegypti]
 gi|108877618|gb|EAT41843.1| wd-repeat protein [Aedes aegypti]
          Length = 756

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 55/139 (39%), Gaps = 16/139 (11%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP- 263
           ++       ++  +FSPN  ++A  +   +D   +      +    K    F        
Sbjct: 409 HVLNDHSDEVWFCKFSPNGLRLATGS---KDNTVIVWEVDPVKLILKNKRTFDGHTYGVS 465

Query: 264 --RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINIS---ASYSPDSSQIV 317
              +S + K  ++   +D   D++  D++    + +T  +   + S   A+++ D ++ V
Sbjct: 466 FIAWSPDSKYFIVCGPED-CPDLWIWDVE--QEKLITKVSHSTDDSLTCAAFNKDGTRFV 522

Query: 318 FESDREGKEQLYVMQSNGS 336
               R    Q Y++  +G+
Sbjct: 523 TGGTRG---QFYLVDLDGT 538


>gi|30749954|pdb|1ORV|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26)
 gi|30749955|pdb|1ORV|B Chain B, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26)
 gi|30749956|pdb|1ORV|C Chain C, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26)
 gi|30749957|pdb|1ORV|D Chain D, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26)
 gi|30749958|pdb|1ORW|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26) In Complex With A Peptidomimetic Inhibitor
 gi|30749959|pdb|1ORW|B Chain B, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26) In Complex With A Peptidomimetic Inhibitor
 gi|30749960|pdb|1ORW|C Chain C, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26) In Complex With A Peptidomimetic Inhibitor
 gi|30749961|pdb|1ORW|D Chain D, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26) In Complex With A Peptidomimetic Inhibitor
 gi|88192457|pdb|2BUA|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26) In Complex With A Low Molecular Weight Inhibitor.
 gi|88192458|pdb|2BUA|B Chain B, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26) In Complex With A Low Molecular Weight Inhibitor.
 gi|88192459|pdb|2BUA|C Chain C, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26) In Complex With A Low Molecular Weight Inhibitor.
 gi|88192460|pdb|2BUA|D Chain D, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26) In Complex With A Low Molecular Weight Inhibitor.
 gi|88192463|pdb|2BUC|A Chain A, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26) In Complex With A Tetrahydroisoquinoline
           Inhibitor
 gi|88192464|pdb|2BUC|B Chain B, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26) In Complex With A Tetrahydroisoquinoline
           Inhibitor
 gi|88192465|pdb|2BUC|C Chain C, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26) In Complex With A Tetrahydroisoquinoline
           Inhibitor
 gi|88192466|pdb|2BUC|D Chain D, Crystal Structure Of Porcine Dipeptidyl Peptidase Iv
           (Cd26) In Complex With A Tetrahydroisoquinoline
           Inhibitor
 gi|90108702|pdb|2AJ8|A Chain A, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With 7-
           Benzyl-1,3-Dimethyl-8-Piperazin-1-Yl-3,
           7-Dihydro-Purine-2, 6-Dione (Bdpx)
 gi|90108703|pdb|2AJ8|B Chain B, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With 7-
           Benzyl-1,3-Dimethyl-8-Piperazin-1-Yl-3,
           7-Dihydro-Purine-2, 6-Dione (Bdpx)
 gi|90108704|pdb|2AJ8|C Chain C, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With 7-
           Benzyl-1,3-Dimethyl-8-Piperazin-1-Yl-3,
           7-Dihydro-Purine-2, 6-Dione (Bdpx)
 gi|90108705|pdb|2AJ8|D Chain D, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With 7-
           Benzyl-1,3-Dimethyl-8-Piperazin-1-Yl-3,
           7-Dihydro-Purine-2, 6-Dione (Bdpx)
 gi|90108706|pdb|2AJB|A Chain A, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With The
           Tripeptide Tert-Butyl-Gly-L-Pro-L-Ile (Tbu-Gpi)
 gi|90108707|pdb|2AJB|B Chain B, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With The
           Tripeptide Tert-Butyl-Gly-L-Pro-L-Ile (Tbu-Gpi)
 gi|90108708|pdb|2AJB|C Chain C, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With The
           Tripeptide Tert-Butyl-Gly-L-Pro-L-Ile (Tbu-Gpi)
 gi|90108709|pdb|2AJB|D Chain D, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With The
           Tripeptide Tert-Butyl-Gly-L-Pro-L-Ile (Tbu-Gpi)
 gi|90108714|pdb|2AJC|A Chain A, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
           4-(2- Aminoethyl)-Benzene Sulphonyl Fluoride (Aebsf)
 gi|90108715|pdb|2AJC|B Chain B, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
           4-(2- Aminoethyl)-Benzene Sulphonyl Fluoride (Aebsf)
 gi|90108716|pdb|2AJC|C Chain C, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
           4-(2- Aminoethyl)-Benzene Sulphonyl Fluoride (Aebsf)
 gi|90108717|pdb|2AJC|D Chain D, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With
           4-(2- Aminoethyl)-Benzene Sulphonyl Fluoride (Aebsf)
 gi|90108718|pdb|2AJD|A Chain A, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With L-
           Pro-Boro-L-Pro (Boropro)
 gi|90108719|pdb|2AJD|B Chain B, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With L-
           Pro-Boro-L-Pro (Boropro)
 gi|90108720|pdb|2AJD|C Chain C, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With L-
           Pro-Boro-L-Pro (Boropro)
 gi|90108721|pdb|2AJD|D Chain D, Porcine Dipeptidyl Peptidase Iv (Cd26) In Complex With L-
           Pro-Boro-L-Pro (Boropro)
          Length = 728

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 41/134 (30%), Gaps = 28/134 (20%)

Query: 264 RFSSNGKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFI--NISA-SYSPDSSQIV 317
             S + +  L       +       S D+      +L     I  N    ++SP   ++ 
Sbjct: 68  SVSPDRQFILFEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWITWSPVGHKLA 127

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEAS------------------YFDPVWSPQGD 359
           +         +YV        +RI+   + +                  Y    WSP G 
Sbjct: 128 YV----WNNDIYVKNEPNLSSQRITWTGKENVIYNGVTDWVYEEEVFSAYSALWWSPNGT 183

Query: 360 LIAFTKFSGEKFAI 373
            +A+ +F+  +  +
Sbjct: 184 FLAYAQFNDTEVPL 197


>gi|326436194|gb|EGD81764.1| Nle1 protein [Salpingoeca sp. ATCC 50818]
          Length = 504

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 12/153 (7%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES-DREGKEQL 328
           K  ++S  +D  + ++          R+T        A +SPD   IV  + DR  +   
Sbjct: 361 KELMVSASEDHTLFLWEPSKSKKPICRMTGHQRPVNYAKFSPDGRWIVSCAFDRSAR--- 417

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLV 387
            V    G     + +      F   W+P   +   T        +    KD    R L  
Sbjct: 418 -VWNRKGEFVATL-RGHVGPVFRCAWAPDSRMFI-TASEDSTLKLW-QTKDTKLSRDLPG 473

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            + ++ A  W P+G  +        D   K++ 
Sbjct: 474 HEGSVFAVDWCPTGSIVA---SGGADKMLKIWR 503



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 35/106 (33%), Gaps = 5/106 (4%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
             P     + +  FSP+   +A  + D      V   D       K     +S +    +
Sbjct: 137 TIPGHADNIVDVAFSPDGNSLASGSGDQ----TVRFWDVFTATPRKTCKGHKSWVQCVAW 192

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           S +  + L S  +D  + ++  D  S A   L          S+ P
Sbjct: 193 SPD-SQLLASGSRDCEIRVWKADRASPACAPLKGHRKYVTWLSWEP 237



 Score = 40.8 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 54/141 (38%), Gaps = 7/141 (4%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
             QK    +  ++  L ++          +  G+ R +  A +FS +G+  + S   D +
Sbjct: 358 KGQKELMVSASEDHTLFLWEPSKSKKPICRMTGHQRPVNYA-KFSPDGRWIV-SCAFDRS 415

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
             ++  + +      L   +      +++PDS   +  S+      L + Q+  +   R 
Sbjct: 416 ARVW--NRKGEFVATLRGHVGPVFRCAWAPDSRMFITASE---DSTLKLWQTKDTKLSRD 470

Query: 342 SQDKEASYFDPVWSPQGDLIA 362
               E S F   W P G ++A
Sbjct: 471 LPGHEGSVFAVDWCPTGSIVA 491



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/111 (11%), Positives = 36/111 (32%), Gaps = 7/111 (6%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +   +FSP+ + +    +D     RV+    R       +      +    ++
Sbjct: 388 MTGHQRPVNYAKFSPDGRWIVSCAFD--RSARVW---NRKGEFVATLRGHVGPVFRCAWA 442

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            +  R  I+  +D  + ++     +  +  L        +  + P  S + 
Sbjct: 443 PD-SRMFITASEDSTLKLWQT-KDTKLSRDLPGHEGSVFAVDWCPTGSIVA 491


>gi|325106408|ref|YP_004276062.1| hypothetical protein Pedsa_3711 [Pedobacter saltans DSM 12145]
 gi|324975256|gb|ADY54240.1| hypothetical protein Pedsa_3711 [Pedobacter saltans DSM 12145]
          Length = 411

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 72/195 (36%), Gaps = 35/195 (17%)

Query: 269 GKRALI----SVQKDEAMD-IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           G R +       + D   + +Y+V+L+  + ++LT           +    +I F+S   
Sbjct: 74  GDRMVFYGNDQYKGDGNGNFLYTVNLKDFSVKQLTFGKQRKTGEILAVKQHKIYFQS--- 130

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFD-PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            ++ +Y + ++    + +    E    +    +    L+A  K + E+  I     +   
Sbjct: 131 -RDTIYAVNADTQKTEVVYVFPEDFKGNITTINADETLLAGAKSTEEEKEIYKNNPEKKD 189

Query: 383 E------------------------RLLVEDSNLQAPTWSPSG-RSLIFSRKKDGDTGSK 417
                                    ++  + + L    +SPS  + L+F  +       +
Sbjct: 190 YFNKIYEAKLPRTLFTIDIKNKQLNKIFTDSAWLNHIQFSPSNPKLLMFCHEGPWHKVDR 249

Query: 418 LYSIDLNGRNETLIN 432
           +++ID++ +N  LI+
Sbjct: 250 IWTIDIDTKNVQLIH 264



 Score = 39.6 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 45/347 (12%), Positives = 110/347 (31%), Gaps = 52/347 (14%)

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSS---PASWRKIAHTISDDIYQSITGEKG 171
           +   +G         L D   ++   GK+  +         KI     D IY      + 
Sbjct: 84  QYKGDGNGNFLYTVNLKDFSVKQLTFGKQRKTGEILAVKQHKIYFQSRDTIYAVNADTQ- 142

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVAY 228
              + +++V      G     +  ++ D    A  +     ++     P     ++K  +
Sbjct: 143 --KTEVVYVFPEDFKGN----ITTINADETLLAGAKSTEEEKEIYKNNP-----EKKDYF 191

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---IY 285
               +  + R        ++   +I    + +   +FS +  + L+   +        I+
Sbjct: 192 NKIYEAKLPRTLFTIDIKNKQLNKIFTDSAWLNHIQFSPSNPKLLMFCHEGPWHKVDRIW 251

Query: 286 SVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKR 340
           ++D+ +   + +   T  + I     +    + I F+      E+ +V  +      +KR
Sbjct: 252 TIDIDTKNVQLIHKRTMNMEIAGHEWFDKRGNIIWFDLQMPRGEKFFVAGVDLQTKKEKR 311

Query: 341 -------------------ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                              +             +P G  I   K  G++F +     D  
Sbjct: 312 YELDRNEWSVHYTSSNDAKLFAGDGGDENAVAKAPNGKWIYLFKPEGDRF-VSEKLVDMK 370

Query: 382 QERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
             +   E +      +SP  + +IF    +G    ++Y++++    +
Sbjct: 371 HHKYKFEPNVH----FSPDQKWVIFRANFEGS--EQIYAVEIQKHKK 411


>gi|307353363|ref|YP_003894414.1| PKD domain-containing protein [Methanoplanus petrolearius DSM
           11571]
 gi|307156596|gb|ADN35976.1| PKD domain containing protein [Methanoplanus petrolearius DSM
           11571]
          Length = 2237

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 43/259 (16%), Positives = 76/259 (29%), Gaps = 33/259 (12%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            ++ L  +D D    ++      QI   P  S +     Y       +  +    + I  
Sbjct: 417 TQSGLFALDPDTHETKWCFSPGPQIDSIPAISSDGT--IYVGAVGGYLYALSSEGSEIWN 474

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SA 307
                    + I +P    NG   + S  K     IY            T    ++  S 
Sbjct: 475 M----TEAGNYITSPAIGPNG--IIYSAYKSNFNAIY---PDGTIKWNTTLGASVSYNSP 525

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +   D +  V  SD    + LY +  +    K      +     P     G  I      
Sbjct: 526 AIGSDGTIYV-GSD---DKNLYAINPDDGSVKWNYSTGDKIRTSPAIGLDGT-IYVGSSD 580

Query: 368 GEKFAI-------GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
           G  +AI        +   + +       D    +P   P G  +      D    S L++
Sbjct: 581 GALYAINPDKTVKWIYDANNNYG----ADFKYCSPVIGPDGT-IYIGSYGD----SLLFA 631

Query: 421 IDLNGRNETLINTPAYASD 439
           I+ +G  +  ++T  Y   
Sbjct: 632 INPDGTEKWTLDTEKYVKS 650



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 46/263 (17%), Positives = 92/263 (34%), Gaps = 28/263 (10%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G +   L  +  +G+ I  +T + + I   P   PN   + Y+ Y  +        D  I
Sbjct: 456 GAVGGYLYALSSEGSEIWNMTEAGNYIT-SPAIGPNG--IIYSAY--KSNFNAIYPDGTI 510

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINI 305
                   +      +P   S+G   +     D   ++Y+++    + +   +    I  
Sbjct: 511 KWNTTLGASVSYN--SPAIGSDGT--IYVGSDD--KNLYAINPDDGSVKWNYSTGDKIRT 564

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS-----YFDPVWSPQGDL 360
           S +   D +  V  SD      LY +  + +  K I            Y  PV  P G  
Sbjct: 565 SPAIGLDGTIYVGSSD----GALYAINPDKT-VKWIYDANNNYGADFKYCSPVIGPDGT- 618

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK-LY 419
             +    G+   +  +  DG+++  L  +  +++ T    G  + F       T S  +Y
Sbjct: 619 -IYIGSYGDSL-LFAINPDGTEKWTLDTEKYVKSITIGNDGT-IYFGSYTSASTTSSFIY 675

Query: 420 SIDLNGRNE-TLINTPAYASDPQ 441
           +++ +   +  L     + S P 
Sbjct: 676 AVNPDKSIKWKLPLADNWYSSPT 698


>gi|221508632|gb|EEE34201.1| WD-repeat membrane protein, putative [Toxoplasma gondii VEG]
          Length = 1127

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 5/99 (5%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           LY + ++  +++             V SP   L+A +   G  F + +     +  R + 
Sbjct: 684 LYSLTTHAFERRLQLPTSRGPIASFVVSPNSSLLAVSTQEGAVFLVDI--LSHTVIRTIY 741

Query: 388 EDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           ++    AP+   +SP  R L  + +     G  LY  D+
Sbjct: 742 KEGAPAAPSAIAFSPDARWLAVASRPGASQGPTLYIYDI 780


>gi|29833971|ref|NP_828605.1| hypothetical protein SAV_7429 [Streptomyces avermitilis MA-4680]
 gi|29611096|dbj|BAC75140.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 408

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 27/186 (14%), Positives = 51/186 (27%), Gaps = 22/186 (11%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATER----LTNTLFINISASYSPDSSQIVFESD 321
           S +G   L      + +  Y +DL            T         ++ P        ++
Sbjct: 216 SPDGGHVLAVDLGTDTVYSYRLDLSKGTLTEASQAHTRPGAGPRHLTFHPRGRFAYLANE 275

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPV---------WSPQGDLIAFTKFSGEKFA 372
            +    +           R++     S               +  G              
Sbjct: 276 VDNTVAVCAYDPATG---RLTPGDPQSTGTGAGTSYPAQILVTSDGSYAYLANRGHNSLT 332

Query: 373 IGVMKKDGSQERLL-VEDSNLQAP---TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
              ++ DG++ RLL         P    +SP G  L+F+  +   T S ++ +D      
Sbjct: 333 RYAVEADGARLRLLDTVPVGGDFPRHIAFSPDGG-LLFAANQRSSTVS-VFHVDRESGEL 390

Query: 429 TLINTP 434
            L   P
Sbjct: 391 RLAGEP 396


>gi|118394837|ref|XP_001029778.1| hypothetical protein TTHERM_01308010 [Tetrahymena thermophila]
 gi|121965516|sp|Q229Z6|POC1_TETTH RecName: Full=POC1 centriolar protein homolog
 gi|89284046|gb|EAR82115.1| hypothetical protein TTHERM_01308010 [Tetrahymena thermophila
           SB210]
          Length = 634

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 58/156 (37%), Gaps = 9/156 (5%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               + I+    F P  ++VA  + D      VY+ + +  + P +    +  +   ++S
Sbjct: 43  FRGHEDIITCADFDPKMRQVASCSKDS----IVYVWNFKPQQRPFKFVGHKGAVYCVKYS 98

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
            +G+    S  +D  + ++   +QS  +  +        S S+S D   ++  SD    +
Sbjct: 99  PDGETIA-SCGQDRQIRLWQNTVQSKCSI-IKAHCGAIRSMSFSADGGYLLSSSD---DK 153

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            L + +             +      V SP   L+A
Sbjct: 154 TLKLWRLQDKKFMCSFAGHKNWVRSGVISPDMRLVA 189



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 41/267 (15%), Positives = 85/267 (31%), Gaps = 36/267 (13%)

Query: 172 DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATY 231
           DF+ ++      V S    + + V +       +        ++  ++SP+ + +A    
Sbjct: 54  DFDPKM----RQVASCSKDSIVYVWNFKPQQRPFKFVGHKGAVYCVKYSPDGETIASCGQ 109

Query: 232 DDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
           D     ++ L    +      I      I +  FS++G   L S   D+ + ++ +    
Sbjct: 110 DR----QIRLWQNTVQSKCSIIKAHCGAIRSMSFSADGGYLL-SSSDDKTLKLWRLQ-DK 163

Query: 292 NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS----------DQKRI 341
                         S   SPD   +   SD    + + +   N            D  +I
Sbjct: 164 KFMCSFAGHKNWVRSGVISPDMRLVASGSD---DKTVMLWDLNFQKIVSKYSTLDDNVKI 220

Query: 342 SQDKEASYFDPVWS-----PQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQA 394
           SQ    S      S     P G  +  + F      I +     ++        D+ + +
Sbjct: 221 SQINSYSDHMDTVSQVLFHPDGTCLISSSFD---HKIKITDIRSNKLIQHYNAHDAQVNS 277

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            +  P+G    F      D+  K++ +
Sbjct: 278 ISIHPTG---YFLASAGSDSKIKIWDL 301


>gi|284044801|ref|YP_003395141.1| prolyl oligopeptidase [Conexibacter woesei DSM 14684]
 gi|283949022|gb|ADB51766.1| Prolyl oligopeptidase [Conexibacter woesei DSM 14684]
          Length = 698

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 60/174 (34%), Gaps = 31/174 (17%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFINI-----SAS 308
               + APR    G R    V+   A    +V  D++      L +T  ++      S  
Sbjct: 72  VDGGMEAPR--PAGGR-WFHVRPTAAGTRLTVSDDVRGGGERVLLDTAALDDPRGPASLD 128

Query: 309 Y---SPDSSQIVFESDREGKEQ--LYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLI 361
           +   +PD   + F     G EQ  L+V++         RI     A+     W P G   
Sbjct: 129 WHWPAPDGDHVAFGLSYGGDEQSVLHVVEVASGRVLEDRIPFCSNATV---AWLPDGRSF 185

Query: 362 AFTK-----FSGEKFAIGVMKKDGSQER-----LLVEDSNLQAPTWSPSGRSLI 405
            +       F   +  + + +  G +ER     + V D     P  SP GR L 
Sbjct: 186 YYNGGLAPDFEDAEKHLFLHRL-GDRERSAPEPVEVRDPYCVFPQVSPDGRHLA 238



 Score = 37.7 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 60/192 (31%), Gaps = 50/192 (26%)

Query: 218 RFSPNQQKVAYA------TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
            + P+ +   Y         D E  L ++ +  R   AP+ +       + P+ S +G+ 
Sbjct: 177 AWLPDGRSFYYNGGLAPDFEDAEKHLFLHRLGDRERSAPEPVEVRDPYCVFPQVSPDGRH 236

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-------ESDREG 324
                 +        +DL+ +    L             PD     F             
Sbjct: 237 LAAITSE--------LDLRPDFVREL-------------PDGEWRAFLEGFDGTGFGFFD 275

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPV-W------SPQ---------GDLIAFTKFSG 368
                 + + G+ + R+ +   A+   P  W      SP          GD +  T++  
Sbjct: 276 GGDYVCVSTFGAPRGRLVRIPVATPRAPATWVELVAESPDVVLKTVARAGDRLVLTQYRD 335

Query: 369 EKFAIGVMKKDG 380
               + V+++DG
Sbjct: 336 TYAEVRVLERDG 347



 Score = 37.3 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 52/161 (32%), Gaps = 18/161 (11%)

Query: 289 LQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +       R     + ++  +     +++    D  G  +  ++ +   D  R      A
Sbjct: 72  VDGGMEAPRPAGGRWFHVRPT--AAGTRLTVSDDVRGGGERVLLDTAALDDPR----GPA 125

Query: 348 SYFDPVWSPQGDLIAFTKFSGE--KFAIGVMKKDGSQERLLVEDSNLQA---PTWSPSGR 402
           S      +P GD +AF    G   +  + V++      R+L +     +     W P GR
Sbjct: 126 SLDWHWPAPDGDHVAFGLSYGGDEQSVLHVVEVASG--RVLEDRIPFCSNATVAWLPDGR 183

Query: 403 SLIF---SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDP 440
           S  +         D    L+   L G  E     P    DP
Sbjct: 184 SFYYNGGLAPDFEDAEKHLFLHRL-GDRERSAPEPVEVRDP 223


>gi|302880536|ref|XP_003039211.1| hypothetical protein NECHADRAFT_56558 [Nectria haematococca mpVI
           77-13-4]
 gi|256720013|gb|EEU33498.1| hypothetical protein NECHADRAFT_56558 [Nectria haematococca mpVI
           77-13-4]
          Length = 655

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 64/169 (37%), Gaps = 35/169 (20%)

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-------NISASYSPDSSQIVFE 319
            +  R + S   +    +  ++  S     +  +  +       N+S+S+S     +  E
Sbjct: 89  PD-DRIIFS---NRDRTVCLLNPDSGKVTEVFGSPALHYGSFSTNVSSSWS-----LAVE 139

Query: 320 SDR------EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
            DR        +  +  + ++  + KRI    +  YF P ++  G  +++T+++  +   
Sbjct: 140 EDRTDSTAEGTQNHVVAINADTGEIKRILTGAD-FYFQPRFNADGTRLSWTQYNRPELPY 198

Query: 374 ---------GVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKD 411
                              RL+   +  ++  P W P G SL F+++ +
Sbjct: 199 TDVKLYCADWSQDGTIKNARLVAGMDHESVAEPRWGPDG-SLFFAKEVN 246



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 48/133 (36%), Gaps = 10/133 (7%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           T     ++  +        +   +N +  ++ D   I+ +    D   F+PRF+ +  ++
Sbjct: 128 TNVSSSWSLAVEEDRTDSTAEGTQNHVVAINADTGEIKRILTGAD-FYFQPRFNADGTRL 186

Query: 227 AYATYDDEDILRV--------YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++  Y+  ++           +  D  I  A    G     +  PR+  +G     + + 
Sbjct: 187 SWTQYNRPELPYTDVKLYCADWSQDGTIKNARLVAGMDHESVAEPRWGPDG-SLFFAKEV 245

Query: 279 DEAMDIYSVDLQS 291
           +    ++ V   S
Sbjct: 246 NSFRQLFRVPPGS 258



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 56/156 (35%), Gaps = 31/156 (19%)

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGS------DQKRISQDKEASYFDPVWSPQGDLIAF- 363
           PD  +I+F S+R+    + ++  +            +     ++     WS     +A  
Sbjct: 89  PD-DRIIF-SNRD--RTVCLLNPDSGKVTEVFGSPALHYGSFSTNVSSSWS-----LAVE 139

Query: 364 -----TKFSGEKFAIGVMKKDGSQE-RLLVEDSNLQAPTWSPSGRSLIFSRKKDGD---T 414
                +   G +  +  +  D  +  R+L        P ++  G  L +++    +   T
Sbjct: 140 EDRTDSTAEGTQNHVVAINADTGEIKRILTGADFYFQPRFNADGTRLSWTQYNRPELPYT 199

Query: 415 GSKLY----SIDLNGRNETLINTPAY--ASDPQWVG 444
             KLY    S D   +N  L+    +   ++P+W  
Sbjct: 200 DVKLYCADWSQDGTIKNARLVAGMDHESVAEPRWGP 235



 Score = 37.7 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/156 (13%), Positives = 55/156 (35%), Gaps = 22/156 (14%)

Query: 258 SMILAPRFSSNGKRALI------SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           S  ++  +S       +      S  +     + +++  +   +R+           ++ 
Sbjct: 127 STNVSSSWS-----LAVEEDRTDSTAEGTQNHVVAINADTGEIKRILTGADFYFQPRFNA 181

Query: 312 DSSQIVFE-SDREGKEQLYV------MQSNGS--DQKRISQDKEASYFDPVWSPQGDLIA 362
           D +++ +   +R       V         +G+  + + ++     S  +P W P G L  
Sbjct: 182 DGTRLSWTQYNRPELPYTDVKLYCADWSQDGTIKNARLVAGMDHESVAEPRWGPDGSLF- 240

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           F K       +  +   GS + + +E + L+   +S
Sbjct: 241 FAKEVNSFRQLFRVPP-GSLQHIPIELTGLEKAEFS 275


>gi|227871965|ref|ZP_03990353.1| WD repeat-containing protein [Oribacterium sinus F0268]
 gi|227842178|gb|EEJ52420.1| WD repeat-containing protein [Oribacterium sinus F0268]
          Length = 1031

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 41/227 (18%), Positives = 83/227 (36%), Gaps = 21/227 (9%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V+   GA+      +++++ F    S +++ VA+   +DE      +         KR+ 
Sbjct: 332 VIYHSGASTLTSISTKNKLTFM-ALSNDEKLVAFGLGNDETA----IAKVENGEIIKRLP 386

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSS 314
                +    FS +  + L+S   D +  I   D++S   +       + +   +S D S
Sbjct: 387 GHSQQVKLLTFSKD-DKLLVSAAFDNS--IIVYDVESGEEKAKLEIPGVPMLGRFSGDDS 443

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           Q  + S        YV  +N + Q+  +   + +         G  +  T  + ++  + 
Sbjct: 444 QFFYVSFTNTSADFYVFDAN-TWQQLSTFSIQETVKYADIKSDGSEVLITLGNNDENQLT 502

Query: 375 VMKK-DGSQE-------RLLVEDSNLQAP----TWSPSGRSLIFSRK 409
                DGS         R  ++ SN   P     +S  G+S+I    
Sbjct: 503 RRSLKDGSVISTIDRIGRTSLDGSNFMLPYKSAFYSNDGKSIILLTD 549


>gi|221488114|gb|EEE26328.1| WD-repeat membrane protein, putative [Toxoplasma gondii GT1]
          Length = 1127

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 39/99 (39%), Gaps = 5/99 (5%)

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           LY + ++  +++             V SP   L+A +   G  F + +     +  R + 
Sbjct: 684 LYSLTTHAFERRLQLPTSRGPIASFVVSPNSSLLAVSTQEGAVFLVDI--LSHTVIRTIY 741

Query: 388 EDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           ++    AP+   +SP  R L  + +     G  LY  D+
Sbjct: 742 KEGAPAAPSAIAFSPDARWLAVASRPGASQGPTLYIYDI 780


>gi|218184027|gb|EEC66454.1| hypothetical protein OsI_32507 [Oryza sativa Indica Group]
          Length = 374

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/173 (13%), Positives = 51/173 (29%), Gaps = 19/173 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + +    FSP+ + +A  + D      V   D             ++ +L   +S +
Sbjct: 113 GHTEAVLAVSFSPDGRCLASGSGDT----TVRFWDLSTQTPLFTCKGHKNWVLCIAWSPD 168

Query: 269 GKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP-----DSSQIVFESD 321
           G   + S  K   + ++  D ++       L        + S+ P        + V  S 
Sbjct: 169 GNHLV-SGSKSGELILW--DPKTGKQLGTPLMGHRKWITAVSWEPVHLQSPCRRFVSTS- 224

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           ++G  +++                  S     W   G  + +T        + 
Sbjct: 225 KDGDARIW--DMTTRKCVIALTGHTNSVTCVKWGGDG--LIYTGSEDCSIKVW 273



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/135 (13%), Positives = 36/135 (26%), Gaps = 14/135 (10%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++   D       +        +    +SP+   +   +   +    +      
Sbjct: 132 SGSGDTTVRFWDLSTQTPLFTCKGHKNWVLCIAWSPDGNHLVSGS---KSGELILWDPKT 188

Query: 246 IDRAPKRIGNFRSMILAPRF------SSNGKRALISVQKDEAMDIYSVDLQSNA-TERLT 298
             +    +   R  I A  +      S    R  +S  KD    I+  D+ +      LT
Sbjct: 189 GKQLGTPLMGHRKWITAVSWEPVHLQSP--CRRFVSTSKDGDARIW--DMTTRKCVIALT 244

Query: 299 NTLFINISASYSPDS 313
                     +  D 
Sbjct: 245 GHTNSVTCVKWGGDG 259


>gi|222111929|ref|YP_002554193.1| curli production assembly/transport component csgg [Acidovorax
           ebreus TPSY]
 gi|221731373|gb|ACM34193.1| Curli production assembly/transport component CsgG [Acidovorax
           ebreus TPSY]
          Length = 226

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 18/102 (17%)

Query: 29  PTSIHAFVKVATNSANYSPVSIAFT----KFV------SIDELGGKVSEVVSKDLQRSDV 78
             S  A+          SP+SI        F        +D LGG+   ++   LQ+S  
Sbjct: 37  TASARAY------QGVRSPISIGKFANRSNFQRGIFSDGVDRLGGQAQTILMTHLQQSGR 90

Query: 79  FNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
           FN++ + +  +       + + Q     GAQ ++TG V + G
Sbjct: 91  FNVLDRTNMSETQQEAALLKQAQ--TLKGAQFVITGDVTEFG 130


>gi|126663141|ref|ZP_01734139.1| peptidoglycan-associated lipoprotein, OmpA family [Flavobacteria
           bacterium BAL38]
 gi|126624799|gb|EAZ95489.1| peptidoglycan-associated lipoprotein, OmpA family [Flavobacteria
           bacterium BAL38]
          Length = 520

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 60/183 (32%), Gaps = 28/183 (15%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFRSMIL--------APRFSSNG 269
           FS +Q+ + +   +  +     L   T  ++  K+  N  ++ +         P  S++G
Sbjct: 126 FSSDQRTIFFTQENPNNKQIFTLHKATLNEKDAKKWTNITNLNIVPEGYSAETPSVSADG 185

Query: 270 KRALISVQKD---EAMDIYSVDL-QSNATERLTN-TLFINIS-----ASYSPDSSQIVFE 319
           K+  I+          DIY   + +     +L N    +N          S D+  I F 
Sbjct: 186 KKIFIATNIPGGFGGFDIYEATIAEDGTVGKLVNLGPNVNTEADEKYPFMSSDNKYIYFS 245

Query: 320 S----DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-----SPQGDLIAFTKFSGEK 370
           S    +  G +       + +    ++   + +           SP    I+  K     
Sbjct: 246 SKGHLNLGGYDVFRSAYVDNTFLTAMNLGTDLNSRRDDLAFVMTSPSKGYISTDKHQSGN 305

Query: 371 FAI 373
           F I
Sbjct: 306 FDI 308



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 15/109 (13%)

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG------------SQERLLVEDSN 391
           D E       +S     I FT+ +     I  + K              +   ++ E  +
Sbjct: 116 DSENDEGSIGFSSDQRTIFFTQENPNNKQIFTLHKATLNEKDAKKWTNITNLNIVPEGYS 175

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGS-KLY--SIDLNGRNETLINTPAYA 437
            + P+ S  G+ +  +    G  G   +Y  +I  +G    L+N     
Sbjct: 176 AETPSVSADGKKIFIATNIPGGFGGFDIYEATIAEDGTVGKLVNLGPNV 224


>gi|80476904|gb|AAI08837.1| LOC495838 protein [Xenopus laevis]
          Length = 349

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 56/294 (19%), Positives = 102/294 (34%), Gaps = 52/294 (17%)

Query: 105 SLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQ 164
           S G+++L TG + +          +LWDV   K         S A    I     D    
Sbjct: 74  SPGSRLLATGGMDR--------RVKLWDVIGNKCEAKGSLTGSNAGITSIEF---DSAGS 122

Query: 165 SITGEKGDFNSRILFV-------SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            +     DF SRI  V       + +  SG + ++  ++D    N R ++ S D+ L   
Sbjct: 123 YLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLD----NARIVSGSHDRTLKL- 177

Query: 218 RFSPNQQ---KVAYATYDDEDIL-------------RVYLMDTRIDRAPKRIGNFRSMIL 261
            +    +   K  +A     DI+             ++   D R +   + +   +  I 
Sbjct: 178 -WDLRSKVCIKTVFAGSSCNDIICTEQCVMSGHFDKKIRFWDIRTECIVREL-ELQGRIT 235

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY-----SPDSSQI 316
           A   +    + L S  +D+ + I   DL++NA ++  +       + +     SPD +  
Sbjct: 236 ALDLNPERTQLL-SCSRDDLIKI--TDLRANAVQQTFSAPGFKCGSDWTRVIFSPDGN-- 290

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            + S    +  LY         +R+     +S     WSP G  +         
Sbjct: 291 -YVSAGSAEGTLYFWNVLTGKMERMFSKHSSSINAVAWSPSGTHVVSVDRGSRG 343


>gi|46204019|ref|ZP_00050614.2| COG3391: Uncharacterized conserved protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 320

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 68/213 (31%), Gaps = 37/213 (17%)

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
           AY T +  + + V   +T    A  ++G     +     S + K   +    D+ +D   
Sbjct: 22  AYVTNEKANTVSVIDTETMAVTATWKVGRRPRGV---TLSKDDKELFVCASDDDRID--V 76

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +D  +    R         S    PD  Q  F  DR G   LYV   + S    +  +K 
Sbjct: 77  LDTATGKVVR---------SLRSGPDPEQ--FILDRSGNP-LYVANEDDSQVTILDIEKN 124

Query: 347 ASYFDPVW---------SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQA 394
               +            SP G ++  T  +           D     ++     D+  + 
Sbjct: 125 KVLAEVPVGVEPEGMGLSPDGKILVNTSETTNMAHF----IDTKTFEVIDNVLVDARPRF 180

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +S  G+ L  S +  G        ID+  R 
Sbjct: 181 AEFSADGKFLWVSAEVGGTVS----VIDVATRK 209


>gi|330795488|ref|XP_003285805.1| hypothetical protein DICPUDRAFT_149688 [Dictyostelium purpureum]
 gi|325084269|gb|EGC37701.1| hypothetical protein DICPUDRAFT_149688 [Dictyostelium purpureum]
          Length = 507

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 42/139 (30%), Gaps = 8/139 (5%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   LIS   D  + +++  +      RLT    +    +YSPD       S     + +
Sbjct: 362 GMEILISGSDDFTVIMWNPSVTKTKLNRLTGHQQLINLVTYSPDGRYFASASF---DKSI 418

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            ++  ++ +   WS     +           +        +    + 
Sbjct: 419 KLWDGITGKFICNFRNHVSAVYQICWSSDSRYLVSGSKDST---LKTWDIKTKKMYNELP 475

Query: 389 DSNLQAPT--WSPSGRSLI 405
               +  T  WSP+G  + 
Sbjct: 476 GHADEVYTVDWSPNGEKIA 494



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 22/204 (10%), Positives = 66/204 (32%), Gaps = 27/204 (13%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
              +       + +    FSP+   +A           + + D   +     +    + +
Sbjct: 130 TRCQSSMSGHTEAVLNCAFSPDGTGLASV----GGDTTLRIWDLNTNTPLHTLKGHTNWV 185

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASY-----SPDS 313
           L   +S + K+   +   +  + I+  D ++     + L          ++     +P+ 
Sbjct: 186 LQVAWSPDSKKIA-TAGMEGEIRIW--DPKTGKQIGQTLRGHTKFITGLAWEPFHLNPNC 242

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRIS---QDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +++   S ++   +++      ++ +R +        S     WS  G+ + +T      
Sbjct: 243 ARLA-SSSKDSTVRVW-----DTELQRCTMTMSGHTMSITCIKWS--GEGLIYTGSQDRT 294

Query: 371 FAIGVMKKDGSQERLLVEDSNLQA 394
             I V   +  +   ++E      
Sbjct: 295 --IRVFDANQGKLVRVLEGHAHWV 316



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 5/128 (3%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D   +    +       R+   + +I    +S +G+    S   D+++ ++   +     
Sbjct: 372 DFTVIMWNPSVTKTKLNRLTGHQQLINLVTYSPDGRYFA-SASFDKSIKLWD-GITGKFI 429

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
               N +       +S DS  +V  S       L                     +   W
Sbjct: 430 CNFRNHVSAVYQICWSSDSRYLVSGSK---DSTLKTWDIKTKKMYNELPGHADEVYTVDW 486

Query: 355 SPQGDLIA 362
           SP G+ IA
Sbjct: 487 SPNGEKIA 494



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 9/118 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                Q++    +SP+ +  A A++D      + L D    +      N  S +    +S
Sbjct: 390 LTGHQQLINLVTYSPDGRYFASASFDK----SIKLWDGITGKFICNFRNHVSAVYQICWS 445

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFES-DR 322
           S+ +  + S  KD  +  +  D+++      L        +  +SP+  +I   S DR
Sbjct: 446 SDSRYLV-SGSKDSTLKTW--DIKTKKMYNELPGHADEVYTVDWSPNGEKIASGSKDR 500


>gi|299470699|emb|CBN79745.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 705

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 39/257 (15%), Positives = 88/257 (34%), Gaps = 32/257 (12%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTP-------SRDQILFEPRFSPNQQKVA 227
             +  V   V  G   +++   D +GA +R           SR   +  P +SP+ + VA
Sbjct: 286 GSVFEVDRLVCLGDKASNIITTDPEGATVRRFLRNDQVAEISRTGQIQLPVWSPDGKMVA 345

Query: 228 YATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDE--- 280
           ++          +      + R    +     +  AP    +S + +        +    
Sbjct: 346 FSVLKAGSGGAPIESAKILVYRESGSLVLDVGVPRAPFLLMWSPSSQSLTYLSNSEGPGG 405

Query: 281 -AMDIYSVDLQSNATERLTNTLFI-NISASY-------SPDSSQIVFESDREGKEQLYVM 331
             + +  + + +  T   T T  +   +  +       S ++  +V  ++R     +Y +
Sbjct: 406 ATIRLSEILVAAAKTPYRTKTRGLAQGNPLFYAYTKKDSRNADMVVHTANR-----VYHL 460

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQG--DLIAFTKFSGEKFAIGVM--KKDGSQERLLV 387
                D+  IS      +  P    +G  D +   +  G++    ++  + DGS ++ + 
Sbjct: 461 DMTTGDEVDISTRAAQLFMAPSTHCEGGEDAVILVETDGDESGQHLVSGRVDGSAKKRIC 520

Query: 388 EDSNLQAPTWSPSGRSL 404
                     SP G+ L
Sbjct: 521 PTRGFSTFGVSPDGQRL 537



 Score = 40.4 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 9/56 (16%)

Query: 372 AIGVMKKDGSQERL---------LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            I     +G+  R          +     +Q P WSP G+ + FS  K G  G+ +
Sbjct: 303 NIITTDPEGATVRRFLRNDQVAEISRTGQIQLPVWSPDGKMVAFSVLKAGSGGAPI 358



 Score = 36.9 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 33/219 (15%), Positives = 72/219 (32%), Gaps = 38/219 (17%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTNTLFINISAS---YSP 311
             I  P +S +GK    SV K  +        +      +  L   + +  +     +SP
Sbjct: 330 GQIQLPVWSPDGKMVAFSVLKAGSGGAPIESAKILVYRESGSLVLDVGVPRAPFLLMWSP 389

Query: 312 DSSQIVFESDREGK-------EQLYVMQSNG---SDQKRISQDKEASY-FDPVWSPQGDL 360
            S  + + S+ EG         ++ V  +     +  + ++Q     Y +    S   D+
Sbjct: 390 SSQSLTYLSNSEGPGGATIRLSEILVAAAKTPYRTKTRGLAQGNPLFYAYTKKDSRNADM 449

Query: 361 IAFTKFSGEKFAIGV-----MKKDGSQERLLVEDSNLQAPTWSPSGR--SLIFSRKKDGD 413
           +     +   + + +     +       +L +  S          G   ++I       +
Sbjct: 450 VV--HTANRVYHLDMTTGDEVDISTRAAQLFMAPSTHCE------GGEDAVILVETDGDE 501

Query: 414 TGSKLYSIDLNGRNETLI------NTPAYASDPQWVGFM 446
           +G  L S  ++G  +  I      +T   + D Q +  M
Sbjct: 502 SGQHLVSGRVDGSAKKRICPTRGFSTFGVSPDGQRLCLM 540


>gi|294667528|ref|ZP_06732743.1| peptidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535]
 gi|292602648|gb|EFF46084.1| peptidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535]
          Length = 790

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 9/106 (8%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
           D +QIV+ S+R+G E LY+      +  ++I++                 + FT      
Sbjct: 384 DGAQIVWASERDGWEHLYLYDGRSGEVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 443

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSR 408
                      +  DG+    L   +      +SP G  L  ++SR
Sbjct: 444 GEDPYYRRAYRIGLDGNGLTALTPVAADHEVRYSPDGTWLLDLYSR 489



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 51/129 (39%), Gaps = 12/129 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA-SYSPDSSQIVFESD--RE 323
           +G + + + ++D    +Y  D +S     ++T   ++          + Q+ F +   + 
Sbjct: 384 DGAQIVWASERDGWEHLYLYDGRSGEVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 443

Query: 324 GKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMK 377
           G++    + Y +  +G+    ++    A+  +  +SP G  +   +++            
Sbjct: 444 GEDPYYRRAYRIGLDGNGLTALTPV--AADHEVRYSPDGTWLLDLYSRVDLGPVLELRRS 501

Query: 378 KDGSQERLL 386
            DGS  R +
Sbjct: 502 ADGSLARTV 510


>gi|240102172|ref|YP_002958480.1| Peptidase, prolyl oligopeptidase family [Thermococcus gammatolerans
           EJ3]
 gi|239909725|gb|ACS32616.1| Peptidase, prolyl oligopeptidase family [Thermococcus gammatolerans
           EJ3]
          Length = 623

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 46/112 (41%), Gaps = 5/112 (4%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
           T SR   + +PR      ++AY           Y     ++   K    F      PR S
Sbjct: 10  TFSRFAYVNDPRI--KGSRIAYTLTKVNMKDNKYESTVVVEDIGKGSRRFIENASMPRLS 67

Query: 267 SNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            +G++   +   +E    +++  +L++ + +++ +   I  S  ++ DS ++
Sbjct: 68  PDGRKIAFTRPNEEKKETEVWVAELETLSAKKVLSAKNI-RSLQWNDDSRRL 118



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 46/106 (43%), Gaps = 9/106 (8%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKD-GSQERLLVEDSNLQAPT 396
           +  + A   DP    +G  IA+T         K+   V+ +D G   R  +E++++  P 
Sbjct: 10  TFSRFAYVNDPRI--KGSRIAYTLTKVNMKDNKYESTVVVEDIGKGSRRFIENASM--PR 65

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            SP GR + F+R  +    ++++  +L   +   + +       QW
Sbjct: 66  LSPDGRKIAFTRPNEEKKETEVWVAELETLSAKKVLSAKNIRSLQW 111


>gi|126326475|ref|XP_001374223.1| PREDICTED: similar to dipeptidyl peptidase IV [Monodelphis
           domestica]
          Length = 768

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 64/208 (30%), Gaps = 40/208 (19%)

Query: 199 DGANIRYLTPSRDQI-------LFEPRFSPNQQKVAYATYDDEDI--LRVYLMDTRIDRA 249
           DG + R      D +        +  R+  + +   Y    D +I    V L        
Sbjct: 40  DGTDHRKTYSLNDYLKNTYRIKSYPIRWISDSE---YLQKIDNNILVFDVELDGNHTVVD 96

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD---IYSVDLQSNATERLTNTLFINI- 305
              + N   +I     S + +  L     DE        S D+ +  T +L     I   
Sbjct: 97  SNTLDNLGYVISDYSVSPDREYVLFEYNYDETWRHSYTASYDIYNVTTRKLIKENKIPNV 156

Query: 306 --SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV---------- 353
             S S+SP   ++ +         +Y+         RI+ + + +               
Sbjct: 157 TQSISWSPVGHKLAYV----WNNDVYIKTEPHLSAVRITHNGKQNVIFNGITDWVYEEEV 212

Query: 354 --------WSPQGDLIAFTKFSGEKFAI 373
                   WSP G  +A+ +F+  K  +
Sbjct: 213 FSAHSAMWWSPDGTFLAYAQFNDTKVPL 240


>gi|21222026|ref|NP_627805.1| peptide hydrolase [Streptomyces coelicolor A3(2)]
 gi|289770782|ref|ZP_06530160.1| peptide hydrolase [Streptomyces lividans TK24]
 gi|5123885|emb|CAB45477.1| putative peptide hydrolase [Streptomyces coelicolor A3(2)]
 gi|289700981|gb|EFD68410.1| peptide hydrolase [Streptomyces lividans TK24]
          Length = 606

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 66/199 (33%), Gaps = 16/199 (8%)

Query: 243 DTRIDRAPKRIGNFRSMILAPRFS--------SNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +       +++ ++     APR S         +  R+L         ++Y+ D  S   
Sbjct: 5   NGLRQTQGEQVPDWEKRFRAPRVSLPDWAEDAPD--RSLFVSNATGTYELYAWDRSSGEQ 62

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKE-QLYVMQ--SNGSDQKRISQDKEASYFD 351
            ++T+          +PD   I +  D++G E  ++  Q  + G D++ +     +    
Sbjct: 63  RQVTDRPNGTTDGVLAPDGDWIWWFDDKDGDEFGVWRRQPFAGGPDEEAVPGLDPSYPAG 122

Query: 352 PVWSPQGDLIAFTKFSGEKF-AIGVMKKDGSQERLLV-EDSNLQAPTWSPSGRSLIFSRK 409
                 G      + + E    I + + DG     +     +      S  G  +     
Sbjct: 123 LALGRDGRTAVIGRSTDEDGTTIHLARGDGGAPAEIYRHRESAGVGDLSHDGSLIAIEHT 182

Query: 410 KDGDT-GSKLYSIDLNGRN 427
           + GD   S L  +  +G  
Sbjct: 183 EHGDAMHSALRVLRPDGST 201



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 86/265 (32%), Gaps = 30/265 (11%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
             +     ++ +   DG     +   R+        S +   +A    +  D +   L  
Sbjct: 136 RSTDEDGTTIHLARGDGGAPAEIYRHRESAGVG-DLSHDGSLIAIEHTEHGDAMHSALRV 194

Query: 244 TRIDRAP------KRIGNFRSMILAPRFSS-NG-KRALISVQKDEAMDIYSVDLQSNATE 295
            R D +        R G     +    F+  +G  R LI  Q+    +    D+ +    
Sbjct: 195 LRPDGSTVAELDDTRGGEEELGLEVLGFAPVDGDTRLLIGHQRRGRWEPLVWDVATGEQT 254

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
            L   L  ++SA + PD S ++     E + +L+           I      +       
Sbjct: 255 DLALELPGDVSAEWYPDGSGLLIVHGFEARSELFRYDFAERGLTEIDT-PAGTVSGATAR 313

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
           P G +      + E  A+       +  R++++   L++P      RS+           
Sbjct: 314 PDGSVEYLWSSAAEPSAVR-----STTGRVVLDPPGLKSP------RSV---------PV 353

Query: 416 SKLYSIDLNGRNETLINTPAYASDP 440
             ++     GR   L+  PA A+ P
Sbjct: 354 EDVWVEGPGGRIHALVQKPAGAAGP 378


>gi|88797487|ref|ZP_01113076.1| hypothetical protein MED297_10056 [Reinekea sp. MED297]
 gi|88779659|gb|EAR10845.1| hypothetical protein MED297_10056 [Reinekea sp. MED297]
          Length = 889

 Score = 45.0 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 46/118 (38%), Gaps = 7/118 (5%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGK 325
           G +    +   +   IY +D +SN       L     +  + + +     +VF SDR G+
Sbjct: 441 GDKLYFVLSGSDRDGIYRLDTRSNQPPAPVVLAQQESL-RAPTVT--DHWLVFTSDRSGR 497

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           +QL     N   Q ++++    +Y+ PVW+     + F  +  +          G + 
Sbjct: 498 DQLMAQHRNTQTQYQLTESPFGAYY-PVWNASEQQLNFADYQSDGMQQRSQTFTGDEL 554



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 56/154 (36%), Gaps = 20/154 (12%)

Query: 267 SNG-KRALISVQKDEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFE--- 319
            +G K      Q+  ++  +S D       +    T+TL  ++ A       ++ F    
Sbjct: 397 PDGFKAHRFDAQRRSSLVHFSAD--GTELTQWALPTHTLAYDLFAQ----GDKLYFVLSG 450

Query: 320 SDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
           SDR+G   +Y + +  +     +   ++ S   P  +     + FT     +  +    +
Sbjct: 451 SDRDG---IYRLDTRSNQPPAPVVLAQQESLRAPTVTDH--WLVFTSDRSGRDQLMAQHR 505

Query: 379 DGSQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
           +   +  L E       P W+ S + L F+  + 
Sbjct: 506 NTQTQYQLTESPFGAYYPVWNASEQQLNFADYQS 539


>gi|270004371|gb|EFA00819.1| hypothetical protein TcasGA2_TC003706 [Tribolium castaneum]
          Length = 490

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 17/177 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +   ++ P    +A  + D      + +   + D     +      I   ++S
Sbjct: 320 FQGHTNEVNAIKWDPQGNFLASCSDDM----TLKIWSMKQDNCVHDLQAHSKEIYTIKWS 375

Query: 267 SNG--------KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             G           L S   D  + ++ V+ +      LT       S ++SPD   +  
Sbjct: 376 PTGPGTQNPNMNLILASASFDSTVRLWDVE-RGACIHTLTKHTEPVYSVAFSPDGKFLAS 434

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            S     ++   + S  S Q   S       F+  W+ +GD +  +   G  F + +
Sbjct: 435 GSF----DKCVHIWSTQSGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFVLDL 487


>gi|260432819|ref|ZP_05786790.1| adenylate cyclase protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260416647|gb|EEX09906.1| adenylate cyclase protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 626

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 95/241 (39%), Gaps = 33/241 (13%)

Query: 13  MKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVS------IAFTKFVSIDELGG--- 63
           + + +   + + G  +  +  A+  +++++A+++ V       IA   F +++       
Sbjct: 194 LTVAVAFAIAVGGLVWWQTSKAW-DLSSDAADHAAVPMTGKPSIAVLAFDNLNRDPEHDY 252

Query: 64  ---KVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEG 120
                SE ++  L R   F +I++DS       P  I +  +   LG + ++ G V   G
Sbjct: 253 LSDSFSENITTALSRFVDFFVIARDSTLGFKDQPVGIQQVAE--ELGVRYVLDGSVQVAG 310

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTIS--DDIYQ--SITGEKGDFNSR 176
            DRLRV  +L D    K +    +       R +    S  D++ +  ++T  +    + 
Sbjct: 311 -DRLRVTAQLIDATSGKTLWADSYD------RDLQDFFSVQDEVTRTIALTLNENIDLAE 363

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGA-------NIRYLTPSRDQILFEPRFSPNQQKVAYA 229
              +       +    L    ++ A       NIR +  S   I  +P F+    ++A+A
Sbjct: 364 YDRLEHKPTDNLNAYELFKRAQEQAFTFTKEGNIRAMRLSEKAIALDPNFAGAYIELAWA 423

Query: 230 T 230
            
Sbjct: 424 H 424


>gi|256420785|ref|YP_003121438.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
 gi|256035693|gb|ACU59237.1| OmpA/MotB domain protein [Chitinophaga pinensis DSM 2588]
          Length = 586

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 73/215 (33%), Gaps = 34/215 (15%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA------- 307
           N      AP ++  G + + +  K+          +  A   +T+   I  +A       
Sbjct: 187 NAGGASYAPVWA--GDQLIYTSTKESNYTNRIYLAKDTAA--VTSRAGIPQAAKTHQGAV 242

Query: 308 SYSPDSSQIVFE--SDREGKEQLYVMQSNGSDQK--------RISQDKEASYFDPVWSPQ 357
           S S D + +     +  +GK+   +  S     K         +     A+   P     
Sbjct: 243 SISADGNVMYLTQWTTADGKKSAAIYSSYKEGDKWSEPVKLDAVINAAGANTQQPFIMSD 302

Query: 358 GDLIAFTKFSGEK---FAIGVMKKDGSQERL--------LVEDSNLQAPTWSPSGRSLIF 406
           G  + F          + +   + D + + L        +   S+ +AP + P+  +L+F
Sbjct: 303 GRHLLFASDRAGGLGGYDLWSAELDAAGKPLSVQNLGPAINTSSDEEAPFFHPASGTLVF 362

Query: 407 SRK-KDGDTGSKLYSIDLN-GRNETLINTPAYASD 439
           +   + G  G  LY    N  + ET +N     +D
Sbjct: 363 ASNGRTGMGGFDLYYAKGNLTKWETPVNFGYPVND 397


>gi|159467381|ref|XP_001691870.1| eukaryotic initiation factor [Chlamydomonas reinhardtii]
 gi|158278597|gb|EDP04360.1| eukaryotic initiation factor [Chlamydomonas reinhardtii]
          Length = 718

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 48/327 (14%), Positives = 101/327 (30%), Gaps = 43/327 (13%)

Query: 120 GKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQS-ITGEKGDFNSRIL 178
            +D   V   +WDV+  KQ+  +KF      +   +    +   +  +    G  +   L
Sbjct: 285 ARDSFHVLINVWDVRSGKQL--RKFEGPVDEYAVGSSAGPNGALKWPVFKWAGGRDD--L 340

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA-YATYDDEDIL 237
           F +      I       M   G     L   +D       +SP +  +A Y+        
Sbjct: 341 FFARLGRGKISIYECPSMTMLGKESLKLDGVQDFE-----WSPVEPVLAAYSAEQGNQPA 395

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ------------------KD 279
           R+ L+        ++        +   +   G    + V+                  KD
Sbjct: 396 RIVLIKVPEKTEMRQKNMLNVSDVKLFWHPQGTYLAVKVEAWTKTKKSTITSFQIFCVKD 455

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL--YVMQSNGS- 336
           + + +   +L++N    L        + ++ P   +         +  +  + M+ +   
Sbjct: 456 KDVPLEVFELKNNKERVL--------NFAWEPKGHRFAVVHGDGPRPNISFFSMRDDKGR 507

Query: 337 -DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
              + +   +  +     WSPQG +I           +     D  +     E       
Sbjct: 508 LGVRELKMLESRACNAISWSPQGRIIVLAGLKNFNGQLEFFNVDEMETMATAEHFMATDV 567

Query: 396 TWSPSGRSLI--FSRKKDGDTGSKLYS 420
            W P+GR +    S  +  + G K++S
Sbjct: 568 EWDPTGRYVATVVSHVQQMENGVKIWS 594


>gi|156537047|ref|XP_001601463.1| PREDICTED: similar to GA15568-PA [Nasonia vitripennis]
          Length = 489

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 37/246 (15%), Positives = 75/246 (30%), Gaps = 31/246 (12%)

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR---------FSPNQQK 225
           SRI F             L ++D    N+  +       L+             S +   
Sbjct: 168 SRIPFKVLDAPELQDDFYLNLVDWSSQNVLSVGLGSCVYLWSACTSQVTRLCDLSGDGNS 227

Query: 226 VAYATYDDEDIL--------RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           V    +++   L         + + D  +++   ++    + + A  +  NG   L S  
Sbjct: 228 VTSVAWNERGNLVAVGTNLGYIQVWDVAVNKQVNKLQGHSARVGALAW--NG-EVLSSGS 284

Query: 278 KDEAMDIYSVDLQSN---ATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQS 333
           +D    I   D+++    +  +L           +SPD+  +       G   +LYV   
Sbjct: 285 RDRL--ILLRDVRTPCLVSERKLGAHRQEVCGLKWSPDNQYLA----SGGNDNRLYVWNL 338

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSNL 392
           +     +   +  A+     WSP    +  +        I       G   + +   S +
Sbjct: 339 HSLSPVQTYTEHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQCVDTGSQV 398

Query: 393 QAPTWS 398
               WS
Sbjct: 399 CNLAWS 404



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 50/145 (34%), Gaps = 5/145 (3%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           ++SP+ Q +A       +  R+Y+ +       +      + + A  +S +    L S  
Sbjct: 316 KWSPDNQYLA----SGGNDNRLYVWNLHSLSPVQTYTEHLAAVKAIAWSPHHHGLLASGG 371

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 I   +  +    +  +T     + ++S  SS++V  +    + Q+ V +     
Sbjct: 372 GTADRCIRFWNTLTGQPMQCVDTGSQVCNLAWSKHSSELV-STHGYSQNQILVWKYPSLT 430

Query: 338 QKRISQDKEASYFDPVWSPQGDLIA 362
           Q                SP G+ I 
Sbjct: 431 QVAKLTGHSYRVLYLAMSPDGEAIV 455


>gi|71279776|ref|YP_270013.1| putative adenylate cyclase [Colwellia psychrerythraea 34H]
 gi|71145516|gb|AAZ25989.1| putative adenylate cyclase [Colwellia psychrerythraea 34H]
          Length = 686

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 55/142 (38%), Gaps = 7/142 (4%)

Query: 7   IAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE----LG 62
           I +E   K+N  L+ ++           F     N      +++   K +S        G
Sbjct: 84  IRQETGQKLNASLMFIIALLISFIVYDKFFTFQINEKLDLTIAVLPFKDMSPGGTQQYFG 143

Query: 63  GKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKD 122
             ++E +   L +     +I++ S  Q       I +      LGAQ ++ G + K  +D
Sbjct: 144 DGIAEEILNSLTKISSLKVIARTSSFQFRNEKKDINQIG--KQLGAQFILEGSIRK-SED 200

Query: 123 RLRVEFRLWDVKDRKQIIGKKF 144
           +LRV  +L D   +  I  + +
Sbjct: 201 KLRVTAQLIDATTQHHIWSETY 222


>gi|47522644|ref|NP_999088.1| acylamino-acid-releasing enzyme [Sus scrofa]
 gi|1351862|sp|P19205|ACPH_PIG RecName: Full=Acylamino-acid-releasing enzyme; Short=AARE; AltName:
           Full=Acyl-peptide hydrolase; Short=APH; AltName:
           Full=Acylaminoacyl-peptidase
 gi|217672|dbj|BAA00411.1| acylamino acid-releasing enzyme [Sus scrofa]
          Length = 732

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 27/188 (14%), Positives = 62/188 (32%), Gaps = 31/188 (16%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDILR-----------VY 240
           LCV+D +  NI  L    + +      ++P    V +  +  E               +Y
Sbjct: 224 LCVLDIESGNISVLEGVPESVSPGQAFWAPGDTGVVFVGWWHEPFRLGIRFCTNRRSALY 283

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM-----DIYSVDLQSNA-- 293
            +D    +  + + +    + +PR S +  R +               +   D  +    
Sbjct: 284 YVDLTGGKC-ELLSDESVAVTSPRLSPDQCRIVYLRFPSLVPHQQCGQLCLYDWYTRVTS 342

Query: 294 ------TERLT-NTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                   +L  +   I  S      +S DS ++VF+S +  ++ L+ + +       ++
Sbjct: 343 VVVDIVPRQLGEDFSGIYCSLLPLGCWSADSQRVVFDSPQRSRQDLFAVDTQMGSVTSLT 402

Query: 343 QDKEASYF 350
                  +
Sbjct: 403 AGGSGGSW 410



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 39/143 (27%), Gaps = 21/143 (14%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ---- 327
                 +     +Y VDL     E L++      S   SPD  +IV+             
Sbjct: 272 IRFCTNR--RSALYYVDLTGGKCELLSDESVAVTSPRLSPDQCRIVYLRFPSLVPHQQCG 329

Query: 328 ---LYVMQSNGSD------QKRISQDKEASYFD----PVWSPQGDLIAFTKFSGEKFAIG 374
              LY   +  +        +++ +D    Y        WS     + F      +  + 
Sbjct: 330 QLCLYDWYTRVTSVVVDIVPRQLGEDFSGIYCSLLPLGCWSADSQRVVFDSPQRSRQDLF 389

Query: 375 VMKKDGSQERLLVEDSNLQAPTW 397
            +         L    +    +W
Sbjct: 390 AVDTQMGSVTSLTAGGSGG--SW 410


>gi|119774520|ref|YP_927260.1| prolyl oligopeptidase family protein [Shewanella amazonensis SB2B]
 gi|119767020|gb|ABL99590.1| prolyl oligopeptidase family protein [Shewanella amazonensis SB2B]
          Length = 686

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 51/149 (34%), Gaps = 20/149 (13%)

Query: 311 PDSSQIVFESD---REGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           P  S+I+   +   ++G     L  +  N + +             P  +     +A+  
Sbjct: 160 PKGSRIICVREDHRQQGSPAASLVTINLNFAGEGDTFVAGHDFISSPSINSDNTQLAWLT 219

Query: 366 FSG-----EKFAIGVMKKDGSQE----RLLVEDSNLQA---PTWSPSGRSLIFSRKKDGD 413
           +       +   + + + D        R++  D    A   P++ P GR L F    D  
Sbjct: 220 WEHPAMPWDNTRLWLGELDRKGRLHSSRVVAGDGGNVAVTQPSFGPDGR-LYFIADYDD- 277

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDPQW 442
               LY +  +G+ E L    A  + P W
Sbjct: 278 -WWNLYRLGDDGKPERLYQKNADFAGPAW 305



 Score = 37.7 bits (86), Expect = 3.9,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 56/162 (34%), Gaps = 19/162 (11%)

Query: 267 SNGKRALISV-----QKDEAMDIYSVDL--QSNATERLTNTLFINISASYSPDSSQIVFE 319
             G R +        Q   A  + +++L         +    FI  S S + D++Q+ + 
Sbjct: 160 PKGSRIICVREDHRQQGSPAASLVTINLNFAGEGDTFVAGHDFI-SSPSINSDNTQLAWL 218

Query: 320 SDRE-----GKEQLYVMQSNGSD---QKRISQDKEASY--FDPVWSPQGDLIAFTKFSGE 369
           +           +L++ + +        R+      +     P + P G  + F     +
Sbjct: 219 TWEHPAMPWDNTRLWLGELDRKGRLHSSRVVAGDGGNVAVTQPSFGPDGR-LYFIADYDD 277

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            + +  +  DG  ERL  ++++   P W    R+  F     
Sbjct: 278 WWNLYRLGDDGKPERLYQKNADFAGPAWRLGERTYAFESDNS 319


>gi|67522198|ref|XP_659160.1| hypothetical protein AN1556.2 [Aspergillus nidulans FGSC A4]
 gi|40745107|gb|EAA64263.1| hypothetical protein AN1556.2 [Aspergillus nidulans FGSC A4]
          Length = 868

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 16/152 (10%)

Query: 175 SRILFVSESVVSGIIKNSL------CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           +  +  + +   G ++  +       V++ +     Y         F   +SP+  +VA 
Sbjct: 560 THAVNCTSTSPDGRLRIVVGDSPDAWVVEAETGRPVYPLRGHKDFGFACAWSPDMMQVAT 619

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG---KRALISVQKDEAMDIY 285
           +  D   I    + D R  R  ++I +  +   + RFS  G   +  L+    + A  I 
Sbjct: 620 SNQDKSAI----IWDARTWRMLEKIESDVAGYRSLRFSPVGGGPRTLLLC---EPADRIV 672

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            V+ Q+  + ++ +       A YSPD S I 
Sbjct: 673 IVNAQTYRSRQVHDFFGEVGGADYSPDGSTIW 704



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 57/153 (37%), Gaps = 10/153 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +          D    ++++    R    +   +    A  +S +  +   +  +D
Sbjct: 569 SPDGR----LRIVVGDSPDAWVVEAETGRPVYPLRGHKDFGFACAWSPDMMQVA-TSNQD 623

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           ++  I+  D ++    E++ + +    S  +SP           E  +++ ++ +     
Sbjct: 624 KSAIIW--DARTWRMLEKIESDVAGYRSLRFSPVGGGPRTLLLCEPADRIVIVNAQTYRS 681

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +++  D         +SP G  I +   + E+F
Sbjct: 682 RQV-HDFFGEVGGADYSPDGSTI-WAANTDERF 712


>gi|319951894|ref|YP_004163161.1| ompa/motb domain protein [Cellulophaga algicola DSM 14237]
 gi|319420554|gb|ADV47663.1| OmpA/MotB domain protein [Cellulophaga algicola DSM 14237]
          Length = 647

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 78/205 (38%), Gaps = 38/205 (18%)

Query: 255 NFRSMILAPRFSSNGKRALI--------SVQKDEA----MDIYSVDLQSNATERLTNTLF 302
           N ++   +P F+ +G+            S  +DE     + +Y   L+  A   +T   F
Sbjct: 219 NKKAHESSPVFTKDGQTMYFTRNNFKNGSFSRDEEGVSHLKLYKATLKDGAWTDITALPF 278

Query: 303 I--NIS---ASYSPDSSQIVFESDREGK----EQLYV-MQSNGSDQKRI----SQDKEAS 348
              + S    + S D +++ F SDR G     +  YV + ++GS    +    S + E+ 
Sbjct: 279 NGEDYSTAHPALSTDETKLYFASDRPGTIGASDIFYVTINTDGSYGTPVNLGSSVNTESR 338

Query: 349 YFDPVWSPQGDLIAFTKFSG------EKFAIGVMKKDGSQERLLVEDSNLQAPTWS---- 398
              P  S    ++ F           + F I + + + ++ + L +  N +   +S    
Sbjct: 339 ETFPNIS-DAAILYFASDGHPGLGGLDVFGIDLAELERTKAKNLGQPLNSEQDDFSYIIN 397

Query: 399 PSGRSLIFSRKK-DGDTGSKLYSID 422
            + +   F+  +  G     +YS  
Sbjct: 398 DTTKKGYFASNREHGVGSDDIYSFS 422


>gi|302830250|ref|XP_002946691.1| hypothetical protein VOLCADRAFT_86901 [Volvox carteri f.
           nagariensis]
 gi|300267735|gb|EFJ51917.1| hypothetical protein VOLCADRAFT_86901 [Volvox carteri f.
           nagariensis]
          Length = 3675

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 52/135 (38%), Gaps = 6/135 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSPN  ++A  T     +++V L++    +  + +   + M+   ++S +G +   +  
Sbjct: 680 AFSPNGAQLAVGTVT--GMVKVLLVENLTQKVAE-VHTLKEMVHELKYSPDGTKLA-AGS 735

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  +DIY V        R            +S D    V +S     E LY   + G  
Sbjct: 736 HDNFIDIYDVTRHYGRLARCAGHSSYITHLDWSVDGR--VIQSTCGAYELLYFEAATGKQ 793

Query: 338 QKRISQDKEASYFDP 352
            ++  +D +   +  
Sbjct: 794 VRQNQRDTQWHTWTC 808



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 73/214 (34%), Gaps = 15/214 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ-QKVAYATYDDEDILRVYLMD 243
           V+G  +  +  + RD      LT      ++   F P +  K A A     D + V++ +
Sbjct: 607 VAGTHRCEIWELSRD--APEPLTQGHSADVYGLAFHPKKPHKFATAC----DSMNVFMWN 660

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            +  +   ++ N      +  FS NG +  +         +   +L     E  T    +
Sbjct: 661 AKRRQLLAKV-NIGVEARSVAFSPNGAQLAVGTVTGMVKVLLVENLTQKVAEVHTLKEMV 719

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           +    YSPD +++   S  +    +Y +  +     R +    +      WS  G +I  
Sbjct: 720 H-ELKYSPDGTKLAAGSH-DNFIDIYDVTRHYGRLARCA-GHSSYITHLDWSVDGRVIQ- 775

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
               G    +      G Q R    D+     TW
Sbjct: 776 -STCGAYELLYFEAATGKQVRQNQRDTQWH--TW 806


>gi|299744585|ref|XP_001831130.2| dipeptidyl-peptidase and tripeptidyl-peptidase [Coprinopsis cinerea
           okayama7#130]
 gi|298406196|gb|EAU90752.2| dipeptidyl-peptidase and tripeptidyl-peptidase [Coprinopsis cinerea
           okayama7#130]
          Length = 932

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 53/189 (28%), Gaps = 37/189 (19%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS------- 306
           G F     +  +       + SV  D +  I  V L +N+T +L +   I          
Sbjct: 174 GTFSPQSTSLHWIPEAGDGVFSVSTDGS--INLVSLSTNSTRKLVDLADIRDEQGNPLAI 231

Query: 307 ASY--SPDSSQIVFESD------REGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQ 357
           A +  SPD   I+ ++D             YV          I      S      WSP 
Sbjct: 232 ADWKVSPDMHHILVKADYRKQWRHSSFGNYYVHNLETKQTWPIIPPSSPSKTAYATWSPT 291

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVE---DSNLQAPTW---------------SP 399
           G+ IA+     + + I          R+            P W               SP
Sbjct: 292 GEAIAYV-VENDLYVIPTADPSAEHIRVTTTGNATFFHGVPDWVYEEEVFSGDHALWFSP 350

Query: 400 SGRSLIFSR 408
               + F  
Sbjct: 351 DSSKIAFLS 359



 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 40/278 (14%), Positives = 82/278 (29%), Gaps = 43/278 (15%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--P 263
           + PS         +SP  + +AY     E+ L V           +      +      P
Sbjct: 275 IPPSSPSKTAYATWSPTGEAIAYVV---ENDLYVIPTADPSAEHIRVTTTGNATFFHGVP 331

Query: 264 RF---------------SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI----- 303
            +               S +  +       +  +  ++  + +   +  T   +      
Sbjct: 332 DWVYEEEVFSGDHALWFSPDSSKIAFLSFDETEVPEFTFPIYNPTEDATTVNPYTTEVVM 391

Query: 304 -NISASY-SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-----VWSP 356
                 Y +P  S  VF+ +R   E       +G++   +      +  +       W  
Sbjct: 392 KYPKPGYPNPIVSVHVFDLERYLNEHEGSGGPDGTEVLTLDWPNRQAANNSVIMEIAWLS 451

Query: 357 QGDLIA--FTKFSGEKFAIG---------VMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              LI     + + +  AI            +  G   R L +D       W  + +++ 
Sbjct: 452 NSSLIVKEVNRNADDGHAILFDLSNEESVRARATGQIVRKLGKDGEQGDDGWIDADQAIY 511

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
                DG+          +G N   +  PA +S+PQW+
Sbjct: 512 PLYLPDGEDAYLDIVPSKDGFNHIALFRPATSSEPQWL 549


>gi|294624783|ref|ZP_06703445.1| peptidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122]
 gi|292600915|gb|EFF44990.1| peptidase [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122]
          Length = 791

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 9/106 (8%)

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKF---- 366
           D +QIV+ S+R+G E LY+      +  ++I++                 + FT      
Sbjct: 385 DGAQIVWASERDGWEHLYLYDGRSGEVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 444

Query: 367 --SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL--IFSR 408
                      +  DG+    L   +      +SP G  L  ++SR
Sbjct: 445 GEDPYYRRAYRIGLDGNGLTALTPVAADHEVRYSPDGTWLLDLYSR 490



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 51/129 (39%), Gaps = 12/129 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISA-SYSPDSSQIVFESD--RE 323
           +G + + + ++D    +Y  D +S     ++T   ++          + Q+ F +   + 
Sbjct: 385 DGAQIVWASERDGWEHLYLYDGRSGEVIRQITRGDWVVRKLDRIDEAAGQVYFTASGMQP 444

Query: 324 GKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIGVMK 377
           G++    + Y +  +G+    ++    A+  +  +SP G  +   +++            
Sbjct: 445 GEDPYYRRAYRIGLDGNGLTALTPV--AADHEVRYSPDGTWLLDLYSRVDLGPVLELRRS 502

Query: 378 KDGSQERLL 386
            DGS  R +
Sbjct: 503 ADGSLARTV 511


>gi|258655485|ref|YP_003204641.1| 3-carboxymuconate cyclase-like protein [Nakamurella multipartita
           DSM 44233]
 gi|258558710|gb|ACV81652.1| 3-carboxymuconate cyclase-like protein [Nakamurella multipartita
           DSM 44233]
          Length = 361

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 47/356 (13%), Positives = 106/356 (29%), Gaps = 34/356 (9%)

Query: 57  SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSI-----PRFQDWNSLGAQVL 111
                G ++ EVV+ D Q +  + L++     + +    +      P +  W+  G  V 
Sbjct: 12  GAGGRGRRI-EVVAHDPQ-TGRWELLTDRDLAEPVAGASATEQPESPSYLAWHPDGWHVY 69

Query: 112 VTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPA-SWRKIAHTISDDIYQSITGEK 170
             G V          + ++W +       G     S +       H   D   + +    
Sbjct: 70  AAGEVS---------DGQVWALAVAPGGHGLSVLGSASTGGAHPCHLAVDPSGRVLLTAN 120

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
             + S  + V      G I     +++ +G                       Q +  A 
Sbjct: 121 --YTSGSIAVHRLTPDGRIGKLSQLVEHEGCGPHPDRQQGPHAHMVHVLD---QTLVLAV 175

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR--FSSNGKRALISVQKDEAMDIYSVD 288
               D++  Y +D         + +       PR   + +  R  ++ +    + +  +D
Sbjct: 176 DLGADLIVAYRLDPAAATLTPLMTSPLPAGFGPRHLVALDHDRVAVAGELTGELALLRLD 235

Query: 289 LQSNATERLTNTLFINI--SASYSPDS------SQIVFESDREGKEQLYVMQSNGSDQKR 340
            Q+   E L      ++    + +P         Q V  ++R G   +   + +G   + 
Sbjct: 236 RQTGQLELLDLQSGSDVAEEPA-APSGVGRTADGQFVLMANR-GPNTVAAFRVDGQSIQL 293

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           + +           +  GDL+       +   +  +  +           N  +PT
Sbjct: 294 VDEIGCGGDHPRDLTVVGDLVYVANQESDSLTVLRIDPETGALSATTSTFNTPSPT 349


>gi|156549788|ref|XP_001606387.1| PREDICTED: similar to guanine nucleotide-binding protein beta 5 (g
           protein beta5) [Nasonia vitripennis]
          Length = 349

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 76/228 (33%), Gaps = 19/228 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +       +    +SP+++ +  ++ D +    + + D         +    + ++A
Sbjct: 53  PRRVLKGHQAKVLCSDWSPDKRHIVSSSQDGK----MIIWDAFTTNKEHAVTMPTTWVIA 108

Query: 263 PRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTLFINISASYSPDSSQIVF 318
             ++ +G + +     D  + +Y +    D+ +      T+T +   S    P+S Q V 
Sbjct: 109 CAYAPSG-QLVACGGLDNKVTVYPLSLEDDVSAKKKTVGTHTSY--TSCCAFPNSDQQVL 165

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                G     +         +       S      +P      F   S +K  + +   
Sbjct: 166 TG--SGDSTCALWDVESGQLLQNFHGHSDSVMSIDLAPSETGNTFVSGSCDKL-VFIWDM 222

Query: 379 DGSQERLLVED--SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              Q     E   S++ +  + PSG ++        D   +L+ +  +
Sbjct: 223 RSGQCVQSFEGHESDVNSVRFHPSGDAVATGSD---DATCRLFDLRAD 267


>gi|114668133|ref|XP_523605.2| PREDICTED: Notchless gene homolog isoform 3 [Pan troglodytes]
          Length = 412

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 267 GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 323

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 324 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 382

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 383 ADEVYAVDWSPDGQRVA 399



 Score = 37.7 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 229 RTGAFEPAEASVNPQDLQGSLQKLKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 285

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 286 AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 323

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 324 KLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAM 377

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 378 DLPGHADEVYAVDWSPDGQRVA 399



 Score = 36.5 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 28/240 (11%), Positives = 69/240 (28%), Gaps = 35/240 (14%)

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSE 182
           RL V+F+     +  Q++G  F             + + +   +    G +  R      
Sbjct: 16  RLLVQFQ----DEGGQLLGSPFDVPVDITPDRLQLVCNAL---LAQVPGQWLWR------ 62

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
                  +  L    RD     +        +    +SP+ +K+A      ++   +   
Sbjct: 63  -----HHRALLGSQHRDTT---FTCKGHRHWVLSISWSPDGKKLA---SGCKNGQILLWD 111

Query: 243 DTRIDRAPKRIGNFRSMILAPRF-----SSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            +   +  + +      I    +     +   +    S  KD ++ I+           L
Sbjct: 112 PSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVA-SSSKDGSVRIWDT-TAGRCERIL 169

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           T          +  D   +++ + ++    + V +++     R  Q           S  
Sbjct: 170 TGHTQSVTCLRWGGDG--LLYSASQD--RTIKVWRAHDGVLCRTLQGHGHWVNTMALSTD 225


>gi|114052198|ref|NP_001040226.1| WD40 protein [Bombyx mori]
 gi|87248441|gb|ABD36273.1| WD40 protein [Bombyx mori]
          Length = 315

 Score = 45.0 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 16/184 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++ +SG +  +L + D    N + L      +   P  + + + + +A   + + +++
Sbjct: 119 VEDTFLSGSLDKTLRLWDLRSPNCQGLMH----LSGRPVAAYDPEGLIFAAGVNSESIKL 174

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATE 295
           Y +   D       K            +FS +GK  LIS        I  VD       +
Sbjct: 175 YDLRSFDKGPFVTFKLNQEKECDWTGLKFSRDGKTMLISTN---GSIIRLVDAYHGTPLQ 231

Query: 296 RLT---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             T   N   I I AS+SPDS  I F    +G+  ++   + G     ++ D  A     
Sbjct: 232 TFTGHLNNKGIPIEASFSPDSQYI-FSGSTDGRVHVWNADT-GYKVCVLNGDHPAPIQCV 289

Query: 353 VWSP 356
            ++P
Sbjct: 290 QFNP 293


>gi|313229472|emb|CBY18286.1| unnamed protein product [Oikopleura dioica]
          Length = 378

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 19/110 (17%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            +A +SP    + F        ++ V++S+      I    +       WSP   LI   
Sbjct: 15  TNAKFSPLGKYLAFVY----ANKICVLKSDSLQTLTILTTIDQ-VKHFEWSPDSQLILAV 69

Query: 365 KFSGEK---FAI----GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
                K   F I         D            ++  T+SP  R +I++
Sbjct: 70  MPGRNKLQAFDITDNKWTCSIDAGGL-------GIEWATFSPDSRHIIYA 112


>gi|302836822|ref|XP_002949971.1| hypothetical protein VOLCADRAFT_42932 [Volvox carteri f.
           nagariensis]
 gi|300264880|gb|EFJ49074.1| hypothetical protein VOLCADRAFT_42932 [Volvox carteri f.
           nagariensis]
          Length = 236

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 51/177 (28%), Gaps = 10/177 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G     +C+ D      R +       +    FS +   +A           V L  T 
Sbjct: 59  TGGDGGGVCLWDPSTGLQRGVLQGHRDSVAAVAFSSDGALLA----SGGRDKMVRLWQTE 114

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                  +      +LA  FS +G     +   D    +++   +      L       +
Sbjct: 115 RCSKVADLKGHTGPLLALAFSPDGAVLASAAHDDAVPRLWNA-AEGRLQAALEGHRQGVL 173

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           S ++SP    +   +D      + +  +     +    D         ++P G  + 
Sbjct: 174 SLAFSPAGGLLATAAD-----NVRLWDAASGAARGALTDHIFPVAAVAFTPDGGTLV 225


>gi|302691710|ref|XP_003035534.1| hypothetical protein SCHCODRAFT_84688 [Schizophyllum commune H4-8]
 gi|300109230|gb|EFJ00632.1| hypothetical protein SCHCODRAFT_84688 [Schizophyllum commune H4-8]
          Length = 661

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 9/132 (6%)

Query: 277 QKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI--VFESDREGKEQLYVMQS 333
                  +Y +    N   R+T +        ++SP+S +   V+               
Sbjct: 247 SYYGETMLYLLSAAGNFDCRVTLDKEGPIHDFAWSPNSKEFGVVY------GYMPAKAVL 300

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                + +     A      ++PQG LIA   F      I +  +    +   ++  N  
Sbjct: 301 FDQRVRTLHDFGSAPQNYISFNPQGRLIALAGFGNLAGKINIFDRRTLTKVTTIDAPNTS 360

Query: 394 APTWSPSGRSLI 405
              WSP GR L+
Sbjct: 361 VCQWSPDGRFLL 372


>gi|300068671|dbj|BAJ10545.1| X-prolyl dipeptidyl aminopeptidase [Streptomyces
           thermocoerulescens]
          Length = 706

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 76/238 (31%), Gaps = 43/238 (18%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR------- 264
             + +PR SP+ + +AY       ++       R    P+  G    +            
Sbjct: 132 GPVIDPRPSPDGRHIAYVARGALRVVGAEGDGDRALAEPEAEGVAYGLAEFIAAEEMGRH 191

Query: 265 ----FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S    R L++   D A+  + +                      +P   Q+ + +
Sbjct: 192 RGFWWSPESDRLLVARADDGAVKRWWI--------------SDPAHPERAP--RQVAYPA 235

Query: 321 DREGKE----QLYVMQSNGSDQKRISQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGV 375
              G      +L+V+  +G+  +         Y   V WS  G  +   +   ++  + +
Sbjct: 236 --AGTPNAEVRLFVVGLDGARVEVSWDRVRYPYLARVHWSAAGAPLLLVQARDQRSQLFL 293

Query: 376 -MKKDGSQERLLVEDSNLQA-------PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
            +       R++  D + Q        P WSPSG  L+    + G     +    L G
Sbjct: 294 AVDPATGTTRMVHADEDPQWLELFPGVPCWSPSG-HLVRIADEGGARVLAVGERPLTG 350


>gi|294141580|ref|YP_003557558.1| acylamino-acid-releasing enzyme [Shewanella violacea DSS12]
 gi|293328049|dbj|BAJ02780.1| acylamino-acid-releasing enzyme [Shewanella violacea DSS12]
          Length = 695

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 63/172 (36%), Gaps = 40/172 (23%)

Query: 310 SPDSSQIVFESD--RE--------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
           SP    + F     RE           +LY++   G ++  I+   + +  +  WS  G 
Sbjct: 52  SPSGDNVAFTRYVPRELYKEDNGLNWAELYLVDDKGVERPYIT--GKVTINNIQWSADGS 109

Query: 360 LIAFTKFSGEKF--AIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIFSRKKDGDT- 414
           LI F    GE    A+  +  +G Q +  +E  +++L   + S +G+ +    +   D  
Sbjct: 110 LIYFLAKMGEDKFTALYQIPFNGGQAQKTLEFKETDLADYSLSNNGKQIAIIAQPAKDKS 169

Query: 415 -------------------GSKLYSIDLNGRNETLINTP----AYASDPQWV 443
                                +LY IDL  R++ L         Y SD QW 
Sbjct: 170 VKKLEKLGFMAEVYEENLVNQQLYVIDLAVRDKPLTPAAWHIEDYVSDVQWS 221



 Score = 40.8 bits (94), Expect = 0.46,   Method: Composition-based stats.
 Identities = 57/343 (16%), Positives = 112/343 (32%), Gaps = 60/343 (17%)

Query: 132 DVKDRKQIIGKKFFSSPASWRKIAHTISD-----------DIYQSITGEKGD---FNSRI 177
           D+K +  ++ +    S       AH  SD            + Q+     GD   F   +
Sbjct: 6   DMKRQLNLVKQAVALSIGLLSVAAH-ASDTLTAEEVIGLQQVAQAQVSPSGDNVAFTRYV 64

Query: 178 LFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
                   +G+    L ++D  G    Y+T      +   ++S +   + +     ED  
Sbjct: 65  PRELYKEDNGLNWAELYLVDDKGVERPYIT--GKVTINNIQWSADGSLIYFLAKMGEDKF 122

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
                        ++   F+   LA    S+NGK+  I  Q            +  + ++
Sbjct: 123 TALYQIPFNGGQAQKTLEFKETDLADYSLSNNGKQIAIIAQ----------PAKDKSVKK 172

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK---EASYFDPV 353
           L    F+             V+E +    +QLYV+     D K ++      E    D  
Sbjct: 173 LEKLGFM-----------AEVYEENLV-NQQLYVIDLAVRD-KPLTPAAWHIEDYVSDVQ 219

Query: 354 WSPQGDLI-------AFTKFSGEKFAIGVMKKDGSQERLLV---EDSNLQAPTWSPSGRS 403
           WS  G  +       A       K    ++    ++++++        L    +S  G+ 
Sbjct: 220 WSTNGQQLLVKTQPTALIDDQYMKSKWHIVNL--AKQQVVTSFMTQGKLGDAAFSHDGKY 277

Query: 404 LIF--SRKKDGDTGSKLYSIDL-NGR-NETLINTPAYASDPQW 442
           +    +         +L+  +   G+ +E L N   + SD +W
Sbjct: 278 VAILGAEDMHDPAAGRLFLAETKTGKISEWLPNHLGHVSDFEW 320


>gi|168705173|ref|ZP_02737450.1| gluconolactonase precursor [Gemmata obscuriglobus UQM 2246]
          Length = 471

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 33/234 (14%), Positives = 68/234 (29%), Gaps = 24/234 (10%)

Query: 165 SITGEKGDFNSRILFVSESVVSG---IIKNSLCVMDRDGANIRYLTP--------SRDQI 213
           ++    G  +  I    +SV +G     K  + V D  G N+  + P        + +  
Sbjct: 70  AVIAPGGQPSVYIDLPEKSVGNGIVFDTKGFMYVADYTGHNVLKIDPKTKAVAVFAHEPT 129

Query: 214 LFEP---RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
             +P     +PN     YA+  +       L     D    ++            S +GK
Sbjct: 130 ANQPNDLAIAPNGT--LYASDPNWAKGTGQLWKVATDGKFTKVAADMGTTNGIDVSPDGK 187

Query: 271 RALISVQKDEAMDIYSVDLQSN-ATERL---TNTLFINISASYSPDSSQIVFESDREGKE 326
              ++      +  + +        ++L    +    +       D +  +    R G  
Sbjct: 188 MLYVNESAQRNVWSFPIQADGTLGEKKLLKKFDDHGFD-GMRCDVDGNLYI---TRYGAG 243

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            +  M  +G   K I    +         P G     T+    +     + + G
Sbjct: 244 TVVKMSPDGKILKEIDVLGKKPSNICFGGPDGRTAYVTEVEFNRVVTFRVDRPG 297


>gi|42567726|ref|NP_196376.2| WD-40 repeat protein family [Arabidopsis thaliana]
 gi|56236046|gb|AAV84479.1| At5g07590 [Arabidopsis thaliana]
 gi|109946635|gb|ABG48496.1| At5g07590 [Arabidopsis thaliana]
 gi|332003800|gb|AED91183.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
          Length = 458

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 63/197 (31%), Gaps = 11/197 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++ + +   Y          +            +I    + I   R+S + +  L + + 
Sbjct: 55  WALDSE---YILCGLYKKPMIQAWSLTQPEWTCKIDEGPAGISYARWSPDSRHILTTSEF 111

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              + ++S+ L +     +        +S  ++ D       + R+ K+ + ++     +
Sbjct: 112 QLRLTVWSL-LNTACVHVQWPKHGSKGVS--FNQDGKFAAICTRRDCKDYVNLLSCQSWE 168

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQA 394
                        D  WSP    I     S  ++ + +   DG    + +       ++ 
Sbjct: 169 IMGSFAVDTLDLADLEWSPDDSSIV-VWDSPLEYKVLIYSPDGRCLFKYQAYECGLGVKT 227

Query: 395 PTWSPSGRSLIFSRKKD 411
            +WSP G+ L       
Sbjct: 228 VSWSPCGQFLAIGSYDQ 244



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 81/240 (33%), Gaps = 31/240 (12%)

Query: 143 KFFSSPASWRKIA-HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC----VMD 197
           ++ +    +R +   T S  + Q  +        +I ++  ++ S  I   L     +  
Sbjct: 20  RYVAVANDYRLVIRDTFSFQVVQLFS-----CLDKISYIEWALDSEYILCGLYKKPMIQA 74

Query: 198 RDGANIRYLTPSRDQI--LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                  +     +    +   R+SP+ + +   +   E  LR+ +              
Sbjct: 75  WSLTQPEWTCKIDEGPAGISYARWSPDSRHILTTS---EFQLRLTVWSLLNTACVHVQWP 131

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSP 311
                    F+ +GK A I  ++D    +  +  QS     +  +  ++        +SP
Sbjct: 132 KHGSK-GVSFNQDGKFAAICTRRDCKDYVNLLSCQS---WEIMGSFAVDTLDLADLEWSP 187

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFS 367
           D S IV   D   + ++ +   +G   + + + +       V    WSP G  +A   + 
Sbjct: 188 DDSSIV-VWDSPLEYKVLIYSPDG---RCLFKYQAYECGLGVKTVSWSPCGQFLAIGSYD 243


>gi|38260686|gb|AAR15500.1| WD-repeat protein [Arabidopsis arenosa]
          Length = 458

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 63/197 (31%), Gaps = 11/197 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++ + +   Y          +            +I    + I   R+S + +  L + + 
Sbjct: 55  WALDSE---YILCGLYKKPMIQAWSLTQPEWTCKIDEGPAGISYARWSPDSRHILTTSEF 111

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              + ++S+ L +     +        +S  ++ D       + R+ K+ + ++     +
Sbjct: 112 QLRLTVWSL-LNTACVHVQWPKHGSKGVS--FNQDGKFAAICTRRDCKDYVNLLSCQSWE 168

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQA 394
                        D  WSP    I     S  ++ + +   DG    + +       ++ 
Sbjct: 169 IMGSFAVDTLDLADLEWSPDDSSIV-VWDSPLEYKVLIYSPDGRCLFKYQAYECGLGVKT 227

Query: 395 PTWSPSGRSLIFSRKKD 411
            +WSP G+ L       
Sbjct: 228 VSWSPCGQFLAIGSYDQ 244



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 81/240 (33%), Gaps = 31/240 (12%)

Query: 143 KFFSSPASWRKIA-HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC----VMD 197
           ++ +    +R +   T S  + Q  +        +I ++  ++ S  I   L     +  
Sbjct: 20  RYVAVANDYRLVIRDTFSFQVVQLFS-----CLDKISYIEWALDSEYILCGLYKKPMIQA 74

Query: 198 RDGANIRYLTPSRDQI--LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                  +     +    +   R+SP+ + +   +   E  LR+ +              
Sbjct: 75  WSLTQPEWTCKIDEGPAGISYARWSPDSRHILTTS---EFQLRLTVWSLLNTACVHVQWP 131

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSP 311
                    F+ +GK A I  ++D    +  +  QS     +  +  ++        +SP
Sbjct: 132 KHGSK-GVSFNQDGKFAAICTRRDCKDYVNLLSCQS---WEIMGSFAVDTLDLADLEWSP 187

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFS 367
           D S IV   D   + ++ +   +G   + + + +       V    WSP G  +A   + 
Sbjct: 188 DDSSIV-VWDSPLEYKVLIYSPDG---RCLFKYQAYECGLGVKTVSWSPCGQFLAIGSYD 243


>gi|38260632|gb|AAR15449.1| WD-repeat protein [Arabidopsis arenosa]
          Length = 458

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 63/197 (31%), Gaps = 11/197 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++ + +   Y          +            +I    + I   R+S + +  L + + 
Sbjct: 55  WALDSE---YILCGLYKKPMIQAWSLTQPEWTCKIDEGPAGISYARWSPDSRHILTTSEF 111

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              + ++S+ L +     +        +S  ++ D       + R+ K+ + ++     +
Sbjct: 112 QLRLTVWSL-LNTACVHVQWPKHGSKGVS--FNQDGKFAAICTRRDCKDYVNLLSCQSWE 168

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQA 394
                        D  WSP    I     S  ++ + +   DG    + +       ++ 
Sbjct: 169 IMGSFAVDTLDLADLEWSPDDSSIV-VWDSPLEYKVLIYSPDGRCLFKYQAYECGLGVKT 227

Query: 395 PTWSPSGRSLIFSRKKD 411
            +WSP G+ L       
Sbjct: 228 VSWSPCGQFLAIGSYDQ 244



 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 81/240 (33%), Gaps = 31/240 (12%)

Query: 143 KFFSSPASWRKIA-HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC----VMD 197
           ++ +    +R +   T S  + Q  +        +I ++  ++ S  I   L     +  
Sbjct: 20  RYVAVANDYRLVIRDTFSFQVVQLFS-----CLDKISYIEWALDSEYILCGLYKKPMIQA 74

Query: 198 RDGANIRYLTPSRDQI--LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                  +     +    +   R+SP+ + +   +   E  LR+ +              
Sbjct: 75  WSLTQPEWTCKIDEGPAGISYARWSPDSRHILTTS---EFQLRLTVWSLLNTACVHVQWP 131

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSP 311
                    F+ +GK A I  ++D    +  +  QS     +  +  ++        +SP
Sbjct: 132 KHGSK-GVSFNQDGKFAAICTRRDCKDYVNLLSCQS---WEIMGSFAVDTLDLADLEWSP 187

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFS 367
           D S IV   D   + ++ +   +G   + + + +       V    WSP G  +A   + 
Sbjct: 188 DDSSIV-VWDSPLEYKVLIYSPDG---RCLFKYQAYECGLGVKTVSWSPCGQFLAIGSYD 243


>gi|26333741|dbj|BAC30588.1| unnamed protein product [Mus musculus]
          Length = 922

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 77/230 (33%), Gaps = 27/230 (11%)

Query: 184 VVSGIIKNSLCVMDRDG-----ANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDIL 237
           V     +  L  +   G          +     + ++  RF P     +A ++YD    L
Sbjct: 559 VAGEDARIRLWRVPPGGLENVLTTPETVLTGHTEKIYSLRFHPLAADVLASSSYD----L 614

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V + D +      ++   +  I +  +S +GK+   +V KD  + +Y     S    + 
Sbjct: 615 TVRIWDLQTGAERLKLQGHQDQIFSLAWSPDGKQLA-TVCKDGHVRVYE-PRSSPLPLQE 672

Query: 298 TNTLFINISAS--YSPDSSQIV---FESDREGKEQLYVMQS-NGSDQKRISQDKEASYFD 351
                    A   +  D   ++   F+S  E + QLY+  +        +  D   S   
Sbjct: 673 GPGPEGGRGARIVWVCDGGCLLVSGFDSRSERQLQLYIADALAQGPSALLGLDVAPSTLL 732

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPS 400
           P + P   L+  T     +  +         E L      L+  ++ SP 
Sbjct: 733 PSYDPDTGLVLLTGKGDTRVFLY--------EVLPEAPFFLECNSFTSPD 774



 Score = 36.9 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 13/148 (8%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  SS G+ A++ +QK          L   A   L N   + +   + P     +  +  
Sbjct: 511 PLLSSGGQVAVLELQKPGR-------LPDTALPTLQNGTAV-MDLVWDPFDPHRLAVAGE 562

Query: 323 EGKEQLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAI--GVMKKD 379
           + + +L+ +   G +    + +     + + ++S +   +A    +   + +   +    
Sbjct: 563 DARIRLWRVPPGGLENVLTTPETVLTGHTEKIYSLRFHPLAADVLASSSYDLTVRIWDLQ 622

Query: 380 GSQERLLVEDSNLQAPT--WSPSGRSLI 405
              ERL ++    Q  +  WSP G+ L 
Sbjct: 623 TGAERLKLQGHQDQIFSLAWSPDGKQLA 650


>gi|332023261|gb|EGI63515.1| Actin-interacting protein 1 [Acromyrmex echinatior]
          Length = 630

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 77/236 (32%), Gaps = 16/236 (6%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           NS+ + + D   I  +       +   ++SP+   +A  + D    +R++    +     
Sbjct: 66  NSVIIRNIDNPAIADVYTEHSCPVNVAKYSPSGFYIA--SGDQSGKVRIWDTVNKEHILK 123

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASY 309
                    I    +S + +R ++  +  E      +     +   ++  +  IN S  +
Sbjct: 124 NEFHPIGGPIKDIAWSPDSQRMVVVGEGRERFGHVFMAETGTSVGEISGQSKSIN-SCDF 182

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P     +     +    + + +      K   Q+         +SP G+L A   F G+
Sbjct: 183 RPARPFRLITGSED--NTIGIFEGPPFKFKMTKQEHTRFVQTVRYSPDGNLFASGGFDGK 240

Query: 370 KFAIGVMKKDGSQER----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            F   +     S              +    W P  + L+ +    GD   KL+ +
Sbjct: 241 VF---LYNGTTSDFVGEIGSPAHQGGVYGVAWKPDSKQLLTAS---GDKTCKLWDV 290



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 5/141 (3%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +    + +  K++ +  S+   P   S N +   ++V       +Y  +L      + T 
Sbjct: 449 VRQIAVTQDGKKLSSL-SIDYEPSCVSINQEIGNVAVGSTSDNKVYIYELSDTTLTQKTE 507

Query: 300 --TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              L     ASYSPD+  +V   D   K  LY +        R      A      WSP 
Sbjct: 508 LEHLGPVTDASYSPDNKYLVAC-DANRKVILYTVPEYKLAHNREWGFHNARVNSVAWSPN 566

Query: 358 GDLIAFTKFSGEKFAIGVMKK 378
            D++A            V   
Sbjct: 567 CDMVASGSLDTTIIIWSVTNP 587


>gi|302768158|ref|XP_002967499.1| hypothetical protein SELMODRAFT_144795 [Selaginella moellendorffii]
 gi|300165490|gb|EFJ32098.1| hypothetical protein SELMODRAFT_144795 [Selaginella moellendorffii]
          Length = 315

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 36/274 (13%), Positives = 87/274 (31%), Gaps = 38/274 (13%)

Query: 108 AQVLVTGRVIKEG-KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            Q +V     +           RLWD+ +      ++F         +A   S D  Q +
Sbjct: 69  VQDVVISSDSQFALSGSWDGTLRLWDLANGN--TTRRFVGHTKDVLSVA--FSADNRQIV 124

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           +G +          S  + + + +    + D+D         S    +   RFSP     
Sbjct: 125 SGSRDK--------SIKLWNTLGECKYTIQDQD---------SHTGWVSCVRFSPVTTNP 167

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
              +   + +++V+  +    +    +      + +   S +G     S  KD    ++ 
Sbjct: 168 IIVSGGWDKMVKVW--NLTNCKLRTNLAGHSGYVNSVTVSPDGSLCA-SGGKDGVAMLWD 224

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD------QKR 340
           +  +      L +   I  S  +SP+   +   +     + + +      +       ++
Sbjct: 225 L-AEGKRLYSL-DAGDIIHSLCFSPNRYWLCAATQ----QCVKIWDLESKNIVEEIKPEQ 278

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +S+ +        WS  G  + F  ++     + 
Sbjct: 279 VSKKEPTYCTTLNWSMDGSKL-FAGYTDGVIRVH 311


>gi|297810977|ref|XP_002873372.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319209|gb|EFH49631.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 587

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 55/168 (32%), Gaps = 21/168 (12%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV--DLQSNATERLTNTLFIN 304
            +  + + +    +   +FS NGK    S  KD+   I+ +  D  ++    L       
Sbjct: 263 SQTVQILESHTDEVWFLQFSHNGKYLA-SSSKDQTAIIWEICADGHTSLKHTLVGHQKPV 321

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           I+  +SPD  Q++       +E +     +  D   I +    S     W P G  I   
Sbjct: 322 IAILWSPDDRQVLTC---GAEEVIRRWDVDSGDCVHIYEKGGISPISCGWYPDGQGIIAG 378

Query: 365 KFSGEKFAIGVMKKDG-------SQERLLVEDSNLQAPTWSPSGRSLI 405
                   I +   DG        Q    V D  +        G+ L+
Sbjct: 379 MTDRS---ICMWDLDGRELECWKGQRTQKVSDIAMTD-----DGKWLV 418



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 65/192 (33%), Gaps = 13/192 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G+   S+C+ D DG  +      R Q + +   + + + +     D      + L D  
Sbjct: 377 AGMTDRSICMWDLDGRELECWKGQRTQKVSDIAMTDDGKWLVSVCKDS----VISLFDRE 432

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLF 302
                +R+     MI +   S++ K  L+++  ++ + +++++       R      + F
Sbjct: 433 AT--VERLIEEEDMITSFSLSNDNKYILVNL-HNQEIRLWNIEGDPKIVSRYKGHKRSRF 489

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I  S        +  F +      Q+Y+   +             +     WSP    + 
Sbjct: 490 IIRSCF---GGYKQAFVASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHML 546

Query: 363 FTKFSGEKFAIG 374
            +        I 
Sbjct: 547 ASASDDGTIRIW 558


>gi|293606622|ref|ZP_06688978.1| gluconolactonase [Achromobacter piechaudii ATCC 43553]
 gi|292815007|gb|EFF74132.1| gluconolactonase [Achromobacter piechaudii ATCC 43553]
          Length = 292

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 48/175 (27%), Gaps = 15/175 (8%)

Query: 221 PNQQKVAYATYDDED---ILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           P+   VA   +            L          RI     ++  P    +G+   +   
Sbjct: 106 PDGSFVAGTMHIHRQEGEPPLGGLYRVDPAGRVARIAQGLGVVNGPVMHPDGRHLHVCDS 165

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYS-PDSSQIVFESDRE------GKEQLYV 330
                  Y +D Q   +      ++I+  A  S PD     F+S+            +  
Sbjct: 166 ARRQGYRYRMDTQGGLSAP---DIYIDTDALGSAPDG--CCFDSEGGLWTALVHAAAIAR 220

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             ++G   +RI              P    I  T  S           DG+  R+
Sbjct: 221 FDADGKLDRRIDLPVAHPASLCFGGPDLSDIFVTTISDSGRLSAKGPLDGALLRI 275



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 57/188 (30%), Gaps = 19/188 (10%)

Query: 248 RAPKRIGNFRSMIL-APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
              +RIG  R+ +   P + + G R  +   +     +  +D  S  T        +   
Sbjct: 1   MRIERIGTVRAALGECPVWDAAGNRLWMLDCRSG--QLLRIDPDSGETRIWELPPPV--- 55

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIA--- 362
            S++      +  + +E      +         RI          D    P G  +A   
Sbjct: 56  GSFALHGQDEIIVALKESFALYRLSDGALRTLGRIDDSHPHLRLNDGAPLPDGSFVAGTM 115

Query: 363 -FTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF--SRKKDGDTGSK 417
              +  GE     +  +   G   R+      +  P   P GR L    S ++ G     
Sbjct: 116 HIHRQEGEPPLGGLYRVDPAGRVARIAQGLGVVNGPVMHPDGRHLHVCDSARRQGYR--- 172

Query: 418 LYSIDLNG 425
            Y +D  G
Sbjct: 173 -YRMDTQG 179


>gi|315499443|ref|YP_004088246.1| peptidase [Asticcacaulis excentricus CB 48]
 gi|315417455|gb|ADU14095.1| putative peptidase [Asticcacaulis excentricus CB 48]
          Length = 695

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/177 (14%), Positives = 49/177 (27%), Gaps = 44/177 (24%)

Query: 253 IGNFRSMILAP--RFSSNGKRALISVQK-----------------DEAMDIYSVDLQS-- 291
           IG   +    P    S +G+     V++                 D A D   VD+    
Sbjct: 49  IGTMSASETTPLLSLSPDGRYVAFQVRQADPVTNLNVFRMVVKATDGATDAIDVDVGGEY 108

Query: 292 --------NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                          +   + I   +SP  + + +    +G+ +++     G     + +
Sbjct: 109 LFWTIPSWGYARNAPSGANLTIQPRWSPSGTHLAYLRQDQGRVRVWRASVKGEGASPVIE 168

Query: 344 DKEASYFDPVWSPQGDLIAFTK--------------FSGEKFAIGVMKKDGSQERLL 386
           D      D  W     LI   +                G  +        G++ R+L
Sbjct: 169 DA-YDIEDVQWLDDNTLIYSGRPGFVEAEAEIEREGRRGWVYDERFHPLTGARPRVL 224



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 23/142 (16%)

Query: 301 LFINISA--SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQ 357
                +   S SPD   + F                    ++       + F  V  +  
Sbjct: 53  SASETTPLLSLSPDGRYVAF------------------QVRQADPVTNLNVFRMVVKATD 94

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
           G   A     G ++    +   G         +    P WSPSG  L + R+  G    +
Sbjct: 95  GATDAIDVDVGGEYLFWTIPSWGYARNAPSGANLTIQPRWSPSGTHLAYLRQDQGRV--R 152

Query: 418 LYSIDLNGRNETLINTPAYASD 439
           ++   + G   + +   AY  +
Sbjct: 153 VWRASVKGEGASPVIEDAYDIE 174


>gi|189235571|ref|XP_001812213.1| PREDICTED: similar to wd-repeat protein [Tribolium castaneum]
          Length = 491

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 17/177 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +   ++ P    +A  + D      + +   + D     +      I   ++S
Sbjct: 321 FQGHTNEVNAIKWDPQGNFLASCSDDM----TLKIWSMKQDNCVHDLQAHSKEIYTIKWS 376

Query: 267 SNG--------KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             G           L S   D  + ++ V+ +      LT       S ++SPD   +  
Sbjct: 377 PTGPGTQNPNMNLILASASFDSTVRLWDVE-RGACIHTLTKHTEPVYSVAFSPDGKFLAS 435

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            S     ++   + S  S Q   S       F+  W+ +GD +  +   G  F + +
Sbjct: 436 GSF----DKCVHIWSTQSGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFVLDL 488


>gi|157363805|ref|YP_001470572.1| acylaminoacyl-peptidase [Thermotoga lettingae TMO]
 gi|157314409|gb|ABV33508.1| Acylaminoacyl-peptidase [Thermotoga lettingae TMO]
          Length = 628

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 12/115 (10%)

Query: 305 ISASYSPDSSQIVFE----SDREGK--EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           +    S D   I +     S  E K   Q+ +   +  +    S         P +SP G
Sbjct: 15  VEVKISRDGRWIAYTLKKISPAENKTIRQITIKNLSTGE----SFYLPQETSKPRFSPDG 70

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKD 411
             +AF +   +   + +++     E+ +++  +L A  WS   +   ++F++K++
Sbjct: 71  KKLAFIRKINDSNILSMIELAHFSEKEILKVDSLTAIDWSSDSKKLLIMFAKKRN 125



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 83/218 (38%), Gaps = 40/218 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA-PRFSSNGKRALISV 276
           + S + + +AY            +    I         +     + PRFS +GK+     
Sbjct: 18  KISRDGRWIAYTLKKISPAENKTIRQITIKNLSTGESFYLPQETSKPRFSPDGKKLAFIR 77

Query: 277 QKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIV--FESDREGKEQLY-- 329
           + +++  +  ++L   + +   ++ +   I+    +S DS +++  F   R  K+  +  
Sbjct: 78  KINDSNILSMIELAHFSEKEILKVDSLTAID----WSSDSKKLLIMFAKKRNDKDLYFED 133

Query: 330 --VMQSNGSD----------------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK- 370
              +  +G                   + + Q +E +  + +W    + I + K+S +K 
Sbjct: 134 TLPVWFDGKGFLDSSIDVVQIIDLESCQVLDQMEERNIANILW--IENDIVYAKYSEKKP 191

Query: 371 ---FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              F I +   DG +  +L +   +  PT S  G+ +I
Sbjct: 192 FTEFDIFLY-IDGKKRLILEKVGLI--PT-SAEGKKII 225



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 29/76 (38%), Gaps = 8/76 (10%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +  K     +   S  G  IA+T        +     I +      +   L ++++   P
Sbjct: 7   TFTKFVVPVEVKISRDGRWIAYTLKKISPAENKTIRQITIKNLSTGESFYLPQETSK--P 64

Query: 396 TWSPSGRSLIFSRKKD 411
            +SP G+ L F RK +
Sbjct: 65  RFSPDGKKLAFIRKIN 80


>gi|73670594|ref|YP_306609.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
 gi|72397756|gb|AAZ72029.1| cell surface protein [Methanosarcina barkeri str. Fusaro]
          Length = 819

 Score = 44.6 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 30/206 (14%), Positives = 72/206 (34%), Gaps = 17/206 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           + + ++V          N++ +++ D  N    T    +  F    + + +KV Y T  D
Sbjct: 595 DGKRIYVPNPDFGNPSNNTILIINTD-TNEVEATVLVGEFPFGVAVTLDGKKV-YVTNLD 652

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
           +  + V    T    A   +G++   +     S +GKR  ++     ++ I + D  +  
Sbjct: 653 DKTVSVIDTSTNTVIATIPVGDYPRGV---AISPDGKRVYVTNSGSNSVSIINTDANT-- 707

Query: 294 TERLTNTLFINISA---SYSPDSSQIV---FESDREGKEQLYVMQSNGSDQKRISQDKEA 347
              +T T+ +       + +PD  ++    + S     + + V+    +           
Sbjct: 708 ---VTATVPVGNWPKSIAVTPDGKKVYVANYGSISTPDDTVSVIDIATNMVTATVHVGSY 764

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAI 373
                  +P G  +       +  +I
Sbjct: 765 P-SGVAVTPDGSRVYVANQRSDNVSI 789



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 66/193 (34%), Gaps = 17/193 (8%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + +KV    Y +   + V         A   +GN+ S +     S +GKR  +       
Sbjct: 555 DGKKVYVTNYYN---ISVIDATKNKVTATIPVGNYPSGV---AVSPDGKRIYVPNPDFGN 608

Query: 282 MD---IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                I  ++  +N  E            + + D  + V+ ++ + K    V   + S  
Sbjct: 609 PSNNTILIINTDTNEVEATVLVGEFPFGVAVTLDGKK-VYVTNLDDKT---VSVIDTSTN 664

Query: 339 KRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPT 396
             I+      Y      SP G  + +   SG   ++ ++  D +     V   N  ++  
Sbjct: 665 TVIATIPVGDYPRGVAISPDGKRV-YVTNSGSN-SVSIINTDANTVTATVPVGNWPKSIA 722

Query: 397 WSPSGRSLIFSRK 409
            +P G+ +  +  
Sbjct: 723 VTPDGKKVYVANY 735


>gi|326429553|gb|EGD75123.1| hypothetical protein PTSG_06778 [Salpingoeca sp. ATCC 50818]
          Length = 504

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 36/237 (15%), Positives = 78/237 (32%), Gaps = 32/237 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++P+ +++              +M        + I    S I + +++ +G   L +   
Sbjct: 155 WTPDGRRLI-----SGHSSGHLIMWYSSTFHFETIVEVGSGIRSLKWNKDGTWML-TGDD 208

Query: 279 DEAMDIYSVDLQS--------NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +  +  + V +++        N   ++           +SP++ +    SD      + V
Sbjct: 209 EGRIKYWQVTIKNVCEFKPHKNPIRQI----------DFSPNNRKFCTCSD---DSTVRV 255

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL--VE 388
                  + R+ +   A      W P   LIA      ++       + G     L  V 
Sbjct: 256 FDFETFSEDRVLRGHGADVRTVAWHPMLSLIASGSHDNQQPLKLWDPRAGENLATLYNVH 315

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
             ++    WSP G +L+ + +   D+  KLY I +     T        +   W   
Sbjct: 316 RDSVTNVKWSPDGNALLSASR---DSLIKLYDIRMMKEVHTYRAHRKEVNSLAWHPL 369



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 71/221 (32%), Gaps = 15/221 (6%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             ++SG     L +      +   +      I    +++ +     +    D++    Y 
Sbjct: 160 RRLISGHSSGHLIMWYSSTFHFETIVEVGSGIRSL-KWNKDG---TWMLTGDDEGRIKYW 215

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
             T  +    +    ++ I    FS N ++       D++  +   D ++ + +R+    
Sbjct: 216 QVTIKNVCEFKP--HKNPIRQIDFSPNNRK--FCTCSDDST-VRVFDFETFSEDRVLRGH 270

Query: 302 FINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
             ++   ++ P  S I   S    +         G +   +      S  +  WSP G+ 
Sbjct: 271 GADVRTVAWHPMLSLIASGSHDNQQPLKLWDPRAGENLATLYNVHRDSVTNVKWSPDGNA 330

Query: 361 IAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
           +         + + I +MK+             + +  W P
Sbjct: 331 LLSASRDSLIKLYDIRMMKE---VHTYRAHRKEVNSLAWHP 368


>gi|291409551|ref|XP_002721055.1| PREDICTED: echinoderm microtubule associated protein like 3
           [Oryctolagus cuniculus]
          Length = 897

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 48/150 (32%), Gaps = 12/150 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              LC+ D +G  + +    ++  L    F P+   VA       +  R  ++DT     
Sbjct: 619 DRQLCLWDGEGHALAWSIDLKETGLCA-DFHPSGAVVAVGL----NTGRWLVLDTETREI 673

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINIS 306
              + +    +   R+S +G    +    D  + IYSV      + R             
Sbjct: 674 VSDVTDGNEQLSVVRYSPDGLYLAV-GSHDNMIYIYSVSSDGAKSSRFGRCVGHSSFITH 732

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +S D +   F     G  ++      G 
Sbjct: 733 LDWSKDGN---FIMSNSGDYEILYWDVAGG 759


>gi|302382365|ref|YP_003818188.1| 40-residue YVTN family beta-propeller repeat protein [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302192993|gb|ADL00565.1| 40-residue YVTN family beta-propeller repeat protein [Brevundimonas
           subvibrioides ATCC 15264]
          Length = 479

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 73/206 (35%), Gaps = 19/206 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+ ++V + T   E  + V    T  + A     N   M +   FS +G+ A I    
Sbjct: 133 FTPDGKEV-WVTVRGEAYVSVLDAATYQETARVETPNGPGMTI---FSPDGRYAYICSS- 187

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASY-----SPDSSQIVFESDREGKEQLYVMQS 333
             + +   V+  +              S        +PD SQ+       GK  ++  + 
Sbjct: 188 -FSPETVVVETATREIV----GRVAQASPFCPDIAATPDGSQVWMTLKDVGKTMVFDARP 242

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
             +  + +      ++ + V +  G   A+    G +  + V + D       +   +L 
Sbjct: 243 PFAVLQTLDTGPLTNHVNIVRNRDGQF-AYVTV-GTENVVKVFRTDTFDPVTEIAVGSLP 300

Query: 394 APTW-SPSGRSLIFSRKKDGDTGSKL 418
              W S  G  + +   ++GD  + +
Sbjct: 301 HGLWPSGDGSRI-YVGLENGDGVAVI 325



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 65/195 (33%), Gaps = 20/195 (10%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-----------SSNGKR 271
            Q   Y+     + + V    T        +G      L+P +           + +GK 
Sbjct: 38  GQDRFYSADQFSNTVSVVDPSTNSLLGVISLGEPTPANLSPLYRGQLLVHGIGAAPDGKT 97

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
             +      +  +  +D  +N  +  T        A ++PD  + V+ + R G+  + V+
Sbjct: 98  IAVVSI--GSNSVSFIDTATNTVKHTTYVGRSPHEAFFTPDGKE-VWVTVR-GEAYVSVL 153

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            +    +     +        ++SP G   A+   S     + V++    +    V  ++
Sbjct: 154 DAATYQETA-RVETPNGPGMTIFSPDGRY-AYICSSFSPETV-VVETATREIVGRVAQAS 210

Query: 392 LQAPTWS--PSGRSL 404
              P  +  P G  +
Sbjct: 211 PFCPDIAATPDGSQV 225


>gi|47523582|ref|NP_999422.1| dipeptidyl peptidase 4 [Sus scrofa]
 gi|52001458|sp|P22411|DPP4_PIG RecName: Full=Dipeptidyl peptidase 4; AltName: Full=Dipeptidyl
           peptidase IV; Short=DPP IV; AltName: Full=T-cell
           activation antigen CD26; AltName: CD_antigen=CD26;
           Contains: RecName: Full=Dipeptidyl peptidase 4 membrane
           form; AltName: Full=Dipeptidyl peptidase IV membrane
           form; Contains: RecName: Full=Dipeptidyl peptidase 4
           soluble form; AltName: Full=Dipeptidyl peptidase IV
           soluble form
 gi|28566188|gb|AAO43404.1| dipeptidyl peptidase IV [Sus scrofa]
          Length = 766

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/134 (14%), Positives = 41/134 (30%), Gaps = 28/134 (20%)

Query: 264 RFSSNGKRALISVQ---KDEAMDIYSVDLQSNATERLTNTLFI--NISA-SYSPDSSQIV 317
             S + +  L       +       S D+      +L     I  N    ++SP   ++ 
Sbjct: 106 SVSPDRQFILFEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWITWSPVGHKLA 165

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEAS------------------YFDPVWSPQGD 359
           +         +YV        +RI+   + +                  Y    WSP G 
Sbjct: 166 YV----WNNDIYVKNEPNLSSQRITWTGKENVIYNGVTDWVYEEEVFSAYSALWWSPNGT 221

Query: 360 LIAFTKFSGEKFAI 373
            +A+ +F+  +  +
Sbjct: 222 FLAYAQFNDTEVPL 235


>gi|302187105|ref|ZP_07263778.1| oligopeptidase B [Pseudomonas syringae pv. syringae 642]
          Length = 686

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 56/170 (32%), Gaps = 15/170 (8%)

Query: 262 APRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF- 318
           A   S + +R   S+    DE   +Y  +L +     L      + S +++ DS  + F 
Sbjct: 132 AFSISPDHQRLAYSLDTSGDEVYALYVKELSTGQISSLPFEN-CDGSMTWANDSQTLFFG 190

Query: 319 ---ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIG 374
              E+ R GK  L+      +  +++  + +  +F   + S     +     S       
Sbjct: 191 ELDETHRPGK--LHRHTLGTASAEQVFDEPDGRFFLHCFRSSSERQLIILLNSKTTSEAW 248

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSP-----SGRSLIFSRKKDGDTGSKLY 419
           V+  D  Q+         +   + P      G    F R         LY
Sbjct: 249 VLDADHPQQAFTCLAPRSEGHEYYPDHGLLDGVWTWFIRSNQSGINFALY 298


>gi|291389704|ref|XP_002711426.1| PREDICTED: WD repeat domain 51B [Oryctolagus cuniculus]
          Length = 435

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 38/290 (13%), Positives = 94/290 (32%), Gaps = 41/290 (14%)

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
            F     ++R + H   D +        G            + S     ++ +   D   
Sbjct: 4   NFKPQARAFRYVGHK--DVVTSVQFSPHG----------NLLASASRDRTVRLWIPDKRG 51

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                 +    +    FS + Q +A A+ D      + + +    R    +      +  
Sbjct: 52  KSSEFKAHTAPVRSVDFSTDGQLLATASEDK----SIKVWNMYRQRFLYSLYRHTHWVRC 107

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS----YSPDSSQIVF 318
            +FS +G R ++S  +D+ + I+     +   ++  N    ++  +    ++P+ + I  
Sbjct: 108 AKFSPDG-RLIVSCSEDKTVKIW----DTTN-KQCVNNFSDSVGFANFVDFNPNGTCIA- 160

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
                    + +     +   +  Q   +      + P G+ +      G    + ++  
Sbjct: 161 --SAGSDHTVKIWDIRVNKLLQHYQVHNSGVNCLSFHPSGNFLITASSDGTLKILDLL-- 216

Query: 379 DGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
              + RL+        P    ++S +G   +FS     DT   L+  + +
Sbjct: 217 ---EGRLIYTLQGHTGPVFTVSFSKNGE--LFSSG-GADTQVLLWRTNFD 260


>gi|47679343|gb|AAT36652.1| Tup1p [Exophiala dermatitidis]
          Length = 619

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 68/213 (31%), Gaps = 25/213 (11%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D + +N + +  S +  +     SP+ + VA  + D      V + D  
Sbjct: 416 SGSGDKTVRLWDIE-SNQQVMVLSIEDGVTTVAMSPDGRFVAAGSLDK----SVRVWDCS 470

Query: 246 IDRAPKRIGNFRSM---ILAPRFSSNGKRALISVQKDEAMDIYSVDL----------QSN 292
                +R+   +     + +  FS +G+  + S   D+ + ++ +               
Sbjct: 471 TGYLIERLEGPQGHKDSVYSVAFSPSGRELV-SGSLDKTIKMWELTPQRNLIPSTAKDGK 529

Query: 293 ATERLTNTLFINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
                       +S   +P    ++  S DR     +        + + + Q  + S   
Sbjct: 530 CIRTFEGHKDYVLSVCLTPGGEWVMSGSKDRG----VQFWDPTTGNAQMMLQGHKNSVIS 585

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
               P G L A T     K  I          +
Sbjct: 586 VAPCPTGQLFA-TGSGDMKARIWQYTTWRGAHQ 617



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 67/196 (34%), Gaps = 18/196 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALIS 275
           RFS + + VA        I          +   + + +      I +  FS +GK    +
Sbjct: 316 RFSNDGKYVATGCNRSAQIFDARDGRKVCELLDESVQDKDGDLYIRSVCFSPDGKLLA-T 374

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQ 332
             +D+ + ++  D+++      T          S  +S     I   S   G + + +  
Sbjct: 375 GAEDKRIRVW--DIENKRIR--TTFDGHEQDIYSLDFSRTGRLIASGS---GDKTVRLWD 427

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN- 391
              S+Q+ +    E        SP G  +A      +   +         ERL     + 
Sbjct: 428 IE-SNQQVMVLSIEDGVTTVAMSPDGRFVAAGSLD-KSVRVWDCSTGYLIERLEGPQGHK 485

Query: 392 --LQAPTWSPSGRSLI 405
             + +  +SPSGR L+
Sbjct: 486 DSVYSVAFSPSGRELV 501


>gi|297812799|ref|XP_002874283.1| TIF3B1 [Arabidopsis lyrata subsp. lyrata]
 gi|297320120|gb|EFH50542.1| TIF3B1 [Arabidopsis lyrata subsp. lyrata]
          Length = 739

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 45/156 (28%), Gaps = 9/156 (5%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +++  +    + P   + A    D                  R  K          A 
Sbjct: 482 LDNKNDKIIAFAWEPKGHRFAVIHGDQPRPDVSFYSMKTAQNTGRVSKLATLKAKQANAL 541

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--VFESD 321
            +S  GK  +++  K     +   ++        T   F+     + P    +     S 
Sbjct: 542 FWSPTGKYIILAGLKGFNGQLEFFNVDE-LETMATAEHFMATDIEWDPTGRYVATAVTSV 600

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            E +    +   NG+   RI +D    +F   W P+
Sbjct: 601 HEMENGFTIWSFNGNLVYRILKDH---FFQLAWRPR 633


>gi|291515365|emb|CBK64575.1| prolyl oligopeptidase . Serine peptidase. MEROPS family S09A
           [Alistipes shahii WAL 8301]
          Length = 710

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 101/307 (32%), Gaps = 27/307 (8%)

Query: 155 AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL 214
            + +SDD   ++T      + R  F   +  SG     + VM  D A+        + + 
Sbjct: 140 PNKLSDDGTVALTDMSFSKDGR-WFAYSAAASGSDWVEIRVM--DTADKSLAADKIEWVK 196

Query: 215 FE-PRFSPNQQKVAYATYDDED---------ILRVYLMDTRIDRAPKRI---GNFRSMIL 261
           F   R++P+ +   Y+ YD              +VY       ++  R+        +  
Sbjct: 197 FSGARWAPDSKGFYYSAYDAPKQNAYSSKNEFQKVYYHALGTPQSADRLIYEDREHPLRY 256

Query: 262 APRF-SSNGKRALISVQKDEAMDIYSV-DLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              + S +GK   +   +  +        +       L      + S        ++ + 
Sbjct: 257 FSAWPSEDGKWLFVIASEGTSGTEVLYKRVSDPKFRVLLPGFDADYSPV-DCKDDRLYYV 315

Query: 320 SDRE-GKEQLYVMQSN-GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
           ++R+     L  +  N     + +  + E +  + V +  G L A+      +  I    
Sbjct: 316 TNRDASNYALMKVDLNRPGRIETVIPESERNLLEGVGTAGGSLFAY-YLQDAQSRIYQYD 374

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGR---SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
             G Q R +V  +      +   GR   S ++    +    + +Y  D+     TL   P
Sbjct: 375 YAGKQVREVVLPAIGSVDGF--DGREEDSELYYTLVNYTAPATIYKYDIASGESTLYKAP 432

Query: 435 AYASDPQ 441
               DP+
Sbjct: 433 EVNFDPE 439



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 44/137 (32%), Gaps = 11/137 (8%)

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--LYVMQSNGS----- 336
           +  +  +    ERLT        ++         +  +   + Q  +Y  +  G      
Sbjct: 78  LSQIPFRGAIRERLTEVWNYAKESAPRKHGDWWYYTYNDGLQNQSVIYRTKEPGEAGEVF 137

Query: 337 -DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMK-KDGSQERLLVEDSNL 392
            D  ++S D   +  D  +S  G   A++  +       I VM   D S     +E    
Sbjct: 138 LDPNKLSDDGTVALTDMSFSKDGRWFAYSAAASGSDWVEIRVMDTADKSLAADKIEWVKF 197

Query: 393 QAPTWSPSGRSLIFSRK 409
               W+P  +   +S  
Sbjct: 198 SGARWAPDSKGFYYSAY 214


>gi|224141285|ref|XP_002324005.1| predicted protein [Populus trichocarpa]
 gi|222867007|gb|EEF04138.1| predicted protein [Populus trichocarpa]
          Length = 328

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 56/147 (38%), Gaps = 11/147 (7%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA--PKRIGNFRSMILAPRFSSNGKRAL 273
            P  + +QQ + +A   +   ++++   +          +G   + +   +FS++GK  L
Sbjct: 157 RPTVAYDQQGLVFAVAMEGGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSML 216

Query: 274 ISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           ++   +   +IY +D           L  +    I A+++PD   +V  S   G   L+ 
Sbjct: 217 LTTTSN---NIYVLDAYGGDKRCGFSLEPSPSTTIEATFTPDGQYVVSGS---GDGTLHA 270

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQ 357
              N  ++               W+P+
Sbjct: 271 WNINMQNEVSCWNSHIGIASCLKWAPR 297


>gi|260809952|ref|XP_002599768.1| hypothetical protein BRAFLDRAFT_205723 [Branchiostoma floridae]
 gi|229285050|gb|EEN55780.1| hypothetical protein BRAFLDRAFT_205723 [Branchiostoma floridae]
          Length = 398

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 34/271 (12%), Positives = 80/271 (29%), Gaps = 33/271 (12%)

Query: 139 IIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR 198
           ++   F     ++R + H   D +   +    G            V S     ++ +   
Sbjct: 40  LMVWNFKPQMRAYRFVGHK--DAVMSVVFSPSG----------HLVASASRDKTVRLWIP 87

Query: 199 DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
                  +  +    +    FSP+ Q +  A+ D      + +      +    +    +
Sbjct: 88  SVKGESTVFKAHTATVRSVDFSPDGQALLTASDDK----SIKVWTVHRQKFQFSLNQHMN 143

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIV 317
            +   RFS +G+  + S   D+ + ++  D  +               S ++ P  + I 
Sbjct: 144 WVRCARFSPDGRMIV-SGSDDKTVKLW--DKNTKECVHTFFEHGGFVNSVAFHPSGTCIA 200

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     + V     +   +  Q   A+     +   G+ +           + ++ 
Sbjct: 201 AA---GTDSTVKVWDIRTNRLLQHYQVHTAAVNGLSFHSSGNYLITASNDSTLKILDLL- 256

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
               + RL       Q P       ++ FSR
Sbjct: 257 ----EGRLFYTLHGHQGPA-----TTVAFSR 278


>gi|190896156|gb|ACE96591.1| U5 snRNP-specific protein-like factor [Populus tremula]
          Length = 215

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 66/209 (31%), Gaps = 18/209 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +       + +  ++ +  ++  A+ D      V   D    +  K++    S + + 
Sbjct: 4   FMVMRGHKNAVLDLHWTADGSQIISASPDK----TVRAWDVETGKQIKKMAEHSSFVNSC 59

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S  G   ++S   D    ++  DL+     +     +   + S+S D+S  +F     
Sbjct: 60  CPSRRGPPLVVSGSDDGTSKLW--DLRQKGAIQTFPDKYQITAVSFS-DASDKIFTG--G 114

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + V      +     +  +        SP G  +  T     K  I  M+    Q 
Sbjct: 115 IYNDVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLL-TDGMDNKLCIWDMRPYAPQN 173

Query: 384 RL--LVEDSNLQA------PTWSPSGRSL 404
           R   + E             +WSP G  +
Sbjct: 174 RRVKIFEGHQHNFEKNLLKCSWSPDGSEV 202


>gi|169403984|ref|NP_001108594.1| dipeptidyl-peptidase 6 [Danio rerio]
          Length = 868

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 51/147 (34%), Gaps = 14/147 (9%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNAT-------ERLTNTLFIN 304
                    P FS +G R   +    +      + + + ++         + LT+  +  
Sbjct: 429 SWLHRQNEPPLFSKDGYRFFFTRAVPQGGRGKFFHISMSTSQPNSSTDTLQSLTSGDWDV 488

Query: 305 IS-ASYSPDSSQIVFESDREG--KEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDL 360
               +Y+ D+  + F S  +G  + QLY   + GS  +R +S +    Y    +SP  + 
Sbjct: 489 TQILAYNEDTRIVYFLSTEDGASRRQLYSANTTGSFNRRCLSCNFRCGYVSGSFSPDANY 548

Query: 361 IAFTKFSGEKFAIGVMKKD-GSQERLL 386
                         V     G  E++L
Sbjct: 549 FFLNCKGPGVPHSAVYSTRYGQYEKIL 575


>gi|90086381|dbj|BAE91743.1| unnamed protein product [Macaca fascicularis]
          Length = 305

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 9/140 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A  T+  +    V +      +    +      IL+  +S +GK    S  
Sbjct: 113 AFSPDSQYLATGTHVGK----VNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLA-SGA 167

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  ++I+ +         L        S ++S DS  +V  SD      + +     ++
Sbjct: 168 IDGIINIFDI-ATGKLLHTLEGHAMPIRSLTFSQDSQLLVTASD---DGYIKIYDVQHAN 223

Query: 338 QKRISQDKEASYFDPVWSPQ 357
                    +   +  + P 
Sbjct: 224 LAGTLSGHASWVLNVAFCPD 243



 Score = 43.5 bits (101), Expect = 0.072,   Method: Composition-based stats.
 Identities = 48/284 (16%), Positives = 91/284 (32%), Gaps = 46/284 (16%)

Query: 102 DWNSLGAQVLVTG-----RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAH 156
            W+  G Q+ V        +       L    RLWD+++ KQI  K   + P     +A 
Sbjct: 57  QWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQI--KSIDAGPVDAWTLA- 113

Query: 157 TISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             S D     T   G    ++      V SG  + SL               +R + +  
Sbjct: 114 -FSPDSQYLAT---GTHVGKVNI--FGVESGKKEYSL--------------DTRGKFILS 153

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
             +SP+ + +A    D      + + D    +    +      I +  FS +  + L++ 
Sbjct: 154 IAYSPDGKYLASGAIDG----IINIFDIATGKLLHTLEGHAMPIRSLTFSQD-SQLLVTA 208

Query: 277 QKDEAMDIYSV---DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
             D  + IY V   +L       L+      ++ ++ PD +           + + V   
Sbjct: 209 SDDGYIKIYDVQHANLAGT----LSGHASWVLNVAFCPDDTHF---VSSSSDKSVKVWDV 261

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                     D +   +   ++  G  I      G+   I +  
Sbjct: 262 GTRTCVHTFFDHQDQVWGEKYNENGSKIVSV---GDDQKIHIYD 302


>gi|328349989|emb|CCA36389.1| Uncharacterized WD repeat-containing protein alr3466 [Pichia
           pastoris CBS 7435]
          Length = 537

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/166 (13%), Positives = 52/166 (31%), Gaps = 13/166 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S +     Y      +   + + D       + +    S +    +S      L +  
Sbjct: 267 NWSQDG----YYLSIGTNDGSIEVWDIETQERLRTMQGHTSRVATQDWS---GHILTAGS 319

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           ++ ++  + V +  +    +TN     I   S+  D  Q+       G + +  +    S
Sbjct: 320 RNGSIVHHDVRVSQHIVSNITNAHAEEICGLSWRSDGQQLA----TGGNDNVVSVWDLRS 375

Query: 337 DQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           ++ R S  + +A+     WSP    +  T        I        
Sbjct: 376 NKPRFSKHEHKAAVKAISWSPDKLSLLATGGGSADKHIHFWNTTTG 421


>gi|326316293|ref|YP_004233965.1| selenium-binding protein [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323373129|gb|ADX45398.1| selenium-binding protein [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 328

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 42/263 (15%), Positives = 86/263 (32%), Gaps = 19/263 (7%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           VV+  + +SL  +D   A ++    +        RF+P+ + +  A      +   Y  D
Sbjct: 74  VVANALADSLTFIDPRTAQVQRTVRNIVDPYHL-RFTPDMKWLITAANRLNHV-DFYRWD 131

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            +     +R+        +  +  +G R + S  +D + ++ ++D+ +      T T  +
Sbjct: 132 GKDLTLVQRVAT--GRTPSHLWVDSGSRMVYSTMQD-SDELVAIDIATQKIRWRTKTGPM 188

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ---KRISQDKEASYFDPVWSPQGDL 360
                 S D  + +F     G + + V   +G++    +RI     A  F          
Sbjct: 189 PADIYGSAD-DKFLFV-GLTGGDGVEVFDVSGAEPKLVQRIKTGSGAHAFRGAG--DKRH 244

Query: 361 IAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           I  +        I  +  +  +   +            SP GR +  S         K+ 
Sbjct: 245 IFVSNRVANT--ISKIDMNTQKVVDVYPAPGGPDCMDVSPDGRWIYVSA----RWAKKML 298

Query: 420 SIDLNGRNETLINTPAYASDPQW 442
            ID   R          +    W
Sbjct: 299 VIDTVERKVVQRINVGKSPHGVW 321


>gi|259486882|tpe|CBF85102.1| TPA: WD repeat protein (AFU_orthologue; AFUA_8G05640) [Aspergillus
           nidulans FGSC A4]
          Length = 757

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 59/152 (38%), Gaps = 16/152 (10%)

Query: 175 SRILFVSESVVSGIIKNSL------CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY 228
           +  +  + +   G ++  +       V++ +     Y         F   +SP+  +VA 
Sbjct: 543 THAVNCTSTSPDGRLRIVVGDSPDAWVVEAETGRPVYPLRGHKDFGFACAWSPDMMQVAT 602

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG---KRALISVQKDEAMDIY 285
           +  D   I    + D R  R  ++I +  +   + RFS  G   +  L+    + A  I 
Sbjct: 603 SNQDKSAI----IWDARTWRMLEKIESDVAGYRSLRFSPVGGGPRTLLLC---EPADRIV 655

Query: 286 SVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            V+ Q+  + ++ +       A YSPD S I 
Sbjct: 656 IVNAQTYRSRQVHDFFGEVGGADYSPDGSTIW 687



 Score = 41.2 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 21/153 (13%), Positives = 57/153 (37%), Gaps = 10/153 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ +          D    ++++    R    +   +    A  +S +  +   +  +D
Sbjct: 552 SPDGR----LRIVVGDSPDAWVVEAETGRPVYPLRGHKDFGFACAWSPDMMQVA-TSNQD 606

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           ++  I+  D ++    E++ + +    S  +SP           E  +++ ++ +     
Sbjct: 607 KSAIIW--DARTWRMLEKIESDVAGYRSLRFSPVGGGPRTLLLCEPADRIVIVNAQTYRS 664

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +++  D         +SP G  I +   + E+F
Sbjct: 665 RQV-HDFFGEVGGADYSPDGSTI-WAANTDERF 695


>gi|303279881|ref|XP_003059233.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226459069|gb|EEH56365.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 358

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/170 (16%), Positives = 52/170 (30%), Gaps = 16/170 (9%)

Query: 284 IYSVDLQSNATERL--TNTLFIN---ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +Y  + ++   ++L  TN    +    S S+  D   +   ++     ++ +  ++   Q
Sbjct: 64  VYLWNAETGDIQQLCQTNQDNEDDYVTSVSWGGDGKHVAVGTN---GAEVQIWDASRLKQ 120

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            R  +   A      W   G  +A            V  ++     L      +    W+
Sbjct: 121 VRTLRGHSARVGALAW--NGTQLATGSRDNNIMMHDVRVREHCTATLTSHTQEVCGLKWA 178

Query: 399 PSGRSLIFSRKKDGDTGSKLY---SIDLNGRNETLINTPAYASDPQWVGF 445
           PSG  L        D    +Y   SI  +     L    A      W  F
Sbjct: 179 PSGNQLA---SGGNDNLLHIYDANSISNSTHLHRLDAHQAAVKALAWCPF 225


>gi|150003663|ref|YP_001298407.1| dipeptidyl peptidase IV [Bacteroides vulgatus ATCC 8482]
 gi|149932087|gb|ABR38785.1| dipeptidyl peptidase IV [Bacteroides vulgatus ATCC 8482]
          Length = 737

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 95/323 (29%), Gaps = 81/323 (25%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPR------------FSPNQQKVAYATYDDED 235
            + N+L V   DG   +     +  +  +              +SP    +A+   D+  
Sbjct: 153 TLDNNLFVTTADGKTQQVTDEPKGIVCGQSVHRQEFGISKGTFWSPKGNLLAFYHMDESM 212

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAP-------------------------------R 264
           +     ++T    A      +    +                                  
Sbjct: 213 VTDYPQVNTSTRIATLEPDKYPMAGMTSHKVTVGIYNPETQKTVYLKAGDPTDRYFTNIS 272

Query: 265 FSSNGKRA-LISVQKDEAMDI-YSVDLQSNATERLTNTLFIN------ISA----SYSP- 311
           +S + K   +I + +D+   +    D ++     L +           +       + P 
Sbjct: 273 WSPDEKSVYVIELNRDQNHALLCCYDAETGEP--LKSNPLYEEKHTKYVEPQHPIVFLPW 330

Query: 312 DSSQIVFESDREGKEQLYVMQSNGS------------------DQKRISQDKEASYFDPV 353
           D ++ +++S R+G   LY+M +  S                    ++++Q          
Sbjct: 331 DHTKFIYQSQRDGYNHLYLMDTKTSVYPESHGAAAGGSYRESYKTRQLTQGNWVVQNILG 390

Query: 354 WSPQGD--LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSRK 409
           ++ +    +I  T+ S  +     +     + RL+     +     S SG  +I  ++  
Sbjct: 391 FNEKTKEVIIMSTEVSPLQSNAYAVNVKTGKRRLIGNKDGMHHVQLSGSGNYVIDNYTSF 450

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
                  ++      G+  +L+ 
Sbjct: 451 TI-PRNIEIVPTSGKGKTISLLT 472


>gi|118576530|ref|YP_876273.1| hypothetical protein CENSYa_1346 [Cenarchaeum symbiosum A]
 gi|118195051|gb|ABK77969.1| hypothetical protein CENSYa_1346 [Cenarchaeum symbiosum A]
          Length = 7615

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 43/304 (14%), Positives = 92/304 (30%), Gaps = 30/304 (9%)

Query: 144  FFSSPASWRKIAHTISDDIYQSITGEKGD-FNSRILFVSESVVSGIIKNSLC-VMDRDGA 201
              +S  +     H  S ++  + T   G  F+   L +  S   G+   +L      D A
Sbjct: 6442 LLNSAYALNSATHEASFNVSAAETDPTGVEFSDDGLLMFVSGPRGVQLYTLVDPFMVDTA 6501

Query: 202  NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI- 260
                  P+      E     +  ++ +    D D +       R             +  
Sbjct: 6502 IHHDFFPAGAGGSPEGLALGDGGRLLFIARADGDDMVQQYELARSFDIHSFPSTSLGVSA 6561

Query: 261  -----LAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNAT--ERLTNTLFINISASYS 310
                      S+NG    +S +   ++  Y++   D  +       +     +     ++
Sbjct: 6562 PDNNPTGVAVSANGTLLFVSARPSNSVLAYNMSYHDAATGTLLHRPVITEQSVLRDLHFT 6621

Query: 311  PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK------EASYFDPVWSPQGDLIAFT 364
            PD + +            + + +      R+  D       +        SP G  + + 
Sbjct: 6622 PDGTTLYTVGRNPHAIHQFDLGAPYDIVSRVLVDNLNVTLQDTGATGLALSPDGTNLFYL 6681

Query: 365  KFSGEKFAIGVMKK-------DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSK 417
              + ++    V+           +    + ED +  A T++P G S+  S    GDT  +
Sbjct: 6682 GLANDQVHQYVLDPPYNVAGAALAGNMNITEDGSPTAVTFTPDGMSMYVS----GDTNKR 6737

Query: 418  LYSI 421
            +Y  
Sbjct: 6738 VYLY 6741



 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 51/267 (19%), Positives = 92/267 (34%), Gaps = 27/267 (10%)

Query: 135  DRKQIIGKKFFSSPASWRKIAHTISDDIYQ--SITGEKGDFNSRILFVSESVVSGIIKNS 192
              +Q+I +   + P   R       D   Q  + TG     N  +LF+S  V   +    
Sbjct: 2747 GGEQLIHQYDLTRPYDIRTFPSVSLDVTAQDGTPTGVAVSANGTLLFISGRVSGSVYGYE 2806

Query: 193  LCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATYDDEDILR-----VYLMDTR 245
            +   D   AN+       S   IL +  F+P+   +     D + I +      Y ++ R
Sbjct: 2807 MSRHDVATANLIQTADISSEQSILRDLHFAPDGTALYTVGRDPDAIHQFNLAAPYDIENR 2866

Query: 246  IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV----DLQSNATERLTNTL 301
                   +            S +G R     Q ++ +  YS+    D+   A     N  
Sbjct: 2867 APAVALNVEPLDDGATGLALSPDGTRLFYLGQANDQVHQYSLDPPYDIAGAAVT--GNAD 2924

Query: 302  FINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              + S +   ++PD  ++ + S   G ++  V Q N +D   +   + A +F       G
Sbjct: 2925 VDDNSPTAVAFTPDGMKM-YVS---GDQRKRVYQYNLADPFELDGARPAGWFHL-----G 2975

Query: 359  DLIAFTKFSGEKFAIGVMKKDGSQERL 385
               A T  S     + +   DG+    
Sbjct: 2976 TAGAVTALSYSADGLHMFSSDGTSVVQ 3002



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 48/278 (17%), Positives = 92/278 (33%), Gaps = 25/278 (8%)

Query: 129  RLWDVKDRKQIIGKKF-FSSPASWRKIAHTISDDIYQSITGEKGD---FNSRILFVSESV 184
            RL+  +   + I  ++  S P   R    + S D+    T   G     N  +LF+S  +
Sbjct: 1478 RLFITRANVEDIVHQYDLSRPYDIRAFP-SASFDVSAQDTRHTGVDVSANGTLLFISGRI 1536

Query: 185  VSGIIKNSLCVMDRDGANIRYLTPSRDQILFE-PRFSPNQQKVAYATYDDEDILRVYLMD 243
             + +   ++   D   AN+ Y T   +Q      RF+PN   + Y      D + ++ + 
Sbjct: 1537 TNSVYAYNMSYHDVATANLAYTTGIDEQDHLRDLRFTPNGTTL-YTVGRMPDAIHLFDLG 1595

Query: 244  TRIDRAPKRIGNFRSMIL------APRFSSNGKRALISVQKDEAMDIYSVD----LQSNA 293
               D     +    ++ L          S +G   L    +++ +  Y++D    L    
Sbjct: 1596 APYDIESHNLAGTLNVSLQDLGATGLEISPDGTSLLYVGLENDRVHQYTLDPPHNLAGAI 1655

Query: 294  T-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM----QSNGSDQKRISQDKE-- 346
                +T       +A +SPD   +    D   +   Y +       G++    S      
Sbjct: 1656 LAGNVTVDDESPTAAEFSPDGMSMYVTGDLNKRVYRYALAEPFNITGAEFTGSSHLGGTA 1715

Query: 347  ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
                   +S  G  + FT          +       +R
Sbjct: 1716 GLVSSLAYSADGLHL-FTSNGSSVLQYALNSFQVGGDR 1752



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 50/294 (17%), Positives = 100/294 (34%), Gaps = 35/294 (11%)

Query: 156  HTISDDIYQSITGEKGD-FNSRILFVSESVVSGIIKNSLC--VMDRDGANIRYLTPSRDQ 212
            H  S D+  + T   G  F+   L +  S   G+   +L    M    A+  +       
Sbjct: 756  HEASFDVSAAETNPTGVEFSDDGLLMFVSGPRGVQSYALVDSFMVATAAHQDFFPTGVGG 815

Query: 213  ILFEPRFSPNQQKVAYATYDDEDILRVYLMD--TRIDRAPKRIGNFRSMILAP---RFSS 267
                       +++  A  D  +++  Y +D    I   P    +  +   AP     S+
Sbjct: 816  APEGLALGDGGRRLIIARPDVGELIHQYELDRPYDIRTFPSVSLDVSAQNDAPSGVAVSA 875

Query: 268  NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFESDR 322
            NG    IS +   ++  Y++    +AT    ++  I+         ++PD + + +   R
Sbjct: 876  NGTLLFISGRPSNSVHAYNMSYHDSATATFLHSAAISEQNILRDLHFAPDGNTL-YTVGR 934

Query: 323  E---------GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                      G                 +QD  A+      SP G  + +   +G++   
Sbjct: 935  TPDAIHQFDLGAPYDIESHVLAGTLNVNAQDSGAT--GLALSPNGTSLFYLGLAGDRVYQ 992

Query: 374  GVMKK----DGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
             ++       G+       V++ +  A T++P G   +F     GD   ++Y  
Sbjct: 993  YMLDPPYNVAGAALAGNATVDEGSPTAVTFAPDGTK-MFVS---GDQNKRVYRY 1042



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 40/272 (14%), Positives = 92/272 (33%), Gaps = 32/272 (11%)

Query: 178  LFVSESVVSGIIKNSLC-VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
            L +  S   G+   SL      D A  R   P+      +       +K+  A    E +
Sbjct: 2692 LLLFVSGPQGVQSYSLAEPFMVDTAVHRDSFPNEGPAPGDLALGDGGRKLFIARPGGEQL 2751

Query: 237  LRVYLMDTRIDRAPKR-----IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---D 288
            +  Y +    D          +            S+NG    IS +   ++  Y +   D
Sbjct: 2752 IHQYDLTRPYDIRTFPSVSLDVTAQDGTPTGVAVSANGTLLFISGRVSGSVYGYEMSRHD 2811

Query: 289  LQSNATER---LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-------NGSDQ 338
            + +    +   +++   I     ++PD + + +   R+  + ++           N +  
Sbjct: 2812 VATANLIQTADISSEQSILRDLHFAPDGTAL-YTVGRD-PDAIHQFNLAAPYDIENRAPA 2869

Query: 339  KRISQDK-EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK--DGSQERLL----VEDSN 391
              ++ +  +        SP G  + +   + ++     +    D +   +     V+D++
Sbjct: 2870 VALNVEPLDDGATGLALSPDGTRLFYLGQANDQVHQYSLDPPYDIAGAAVTGNADVDDNS 2929

Query: 392  LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              A  ++P G  +  S    GD   ++Y  +L
Sbjct: 2930 PTAVAFTPDGMKMYVS----GDQRKRVYQYNL 2957



 Score = 38.5 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 12/115 (10%)

Query: 218  RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN----FRSMILAPRFSSNGKRAL 273
              SP+   + Y   +++ + +  L            GN          A  F+ +GK   
Sbjct: 2268 ALSPDGTSLFYLGLENDRVHQYALEQPYNVAGAAVTGNASVAQDGSPTAVAFTPDGKTMY 2327

Query: 274  ISVQKDEAMDIYSV----DLQS---NATERLTNTLFINISASYSPDSSQIVFESD 321
            +S   ++ +  Y++    D+          L     I  + SYS D   + F SD
Sbjct: 2328 VSGDINKRVYRYTLAEPFDITGAEFTGWFHLEGASSIITALSYSADGLHM-FSSD 2381



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 41/261 (15%), Positives = 81/261 (31%), Gaps = 26/261 (9%)

Query: 178  LFVSESVVSGIIKNSL-CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
            LF+  S   G+    L        A      P+      +       +++  A +D+ D 
Sbjct: 5234 LFMFVSGPQGVQSYELSEPFMVTTAARFNFFPNEGGAPSDLVLGDGGRRLIIARHDEADS 5293

Query: 237  LRVYLMDTRID-----RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
            +  Y++    D          +     M      S+NG    IS   +  +  Y +    
Sbjct: 5294 IHQYVLTRPYDIRALPSVSLDVSAQDGMPTGVAVSANGTLLFISGSNENPVYGYEMSRHD 5353

Query: 292  NATERLTNTLFIN-----ISASYSPDSSQIVFESDREGKE-------QLYVMQSNGSDQK 339
             AT  LT+T  I          ++PD + I++   R             Y +Q+      
Sbjct: 5354 VATANLTHTSAIPEQRHLQDLHFTPDGT-ILYTVGRSPDAIHQFNLAAPYDIQNRDPAVA 5412

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-------DGSQERLLVEDSNL 392
               + ++        SP G  + +     +     V+           +    + +D + 
Sbjct: 5413 LNVEPQDMRATGLALSPNGTSLFYLGLENDLVHQYVLDPPYAVSGATLAGNVSVAQDGSP 5472

Query: 393  QAPTWSPSGRSLIFSRKKDGD 413
             A  +SP G ++  +   D  
Sbjct: 5473 TAVAFSPDGMNMYVAGDIDNR 5493



 Score = 36.5 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 30/183 (16%), Positives = 58/183 (31%), Gaps = 17/183 (9%)

Query: 154  IAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT----PS 209
            + HT +    + +       +  IL+        I + +L     D  N           
Sbjct: 5359 LTHTSAIPEQRHLQDLHFTPDGTILYTVGRSPDAIHQFNLA-APYDIQNRDPAVALNVEP 5417

Query: 210  RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF----RSMILAPRF 265
            +D        SPN   + Y   +++ + +  L            GN          A  F
Sbjct: 5418 QDMRATGLALSPNGTSLFYLGLENDLVHQYVLDPPYAVSGATLAGNVSVAQDGSPTAVAF 5477

Query: 266  SSNGKRALISVQKDEAMDIYSV----DLQS---NATERLTNTLFINISASYSPDSSQIVF 318
            S +G    ++   D  +  Y++    ++     +   +L  T  +  S  +S D   + F
Sbjct: 5478 SPDGMNMYVAGDIDNRVYGYTLEEPFNITGAGFSGRFQLDGTTGLVSSLFFSADGLHM-F 5536

Query: 319  ESD 321
             SD
Sbjct: 5537 TSD 5539


>gi|114583982|ref|XP_001149307.1| PREDICTED: APG16 autophagy 16-like isoform 1 [Pan troglodytes]
 gi|114583984|ref|XP_001149441.1| PREDICTED: APG16 autophagy 16-like isoform 2 [Pan troglodytes]
          Length = 266

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 51/286 (17%), Positives = 97/286 (33%), Gaps = 44/286 (15%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
             +LW+V   K         S A    I     D     +     DF SRI  V      
Sbjct: 4   RVKLWEVFGEKCEFKGSLSGSNAGITSIEF---DSAGSYLLAASNDFASRIWTV------ 54

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
                       D   +R+        +   +F  +  ++   ++D      + L D R 
Sbjct: 55  ------------DDYRLRHTLTGHSGKVLSAKFLLDNARIVSGSHDR----TLKLWDLRS 98

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               K +    S           ++ ++S   D+ +  +  D++S +  R    L    +
Sbjct: 99  KVCIKTVFAGSSCNDIVC----TEQCVMSGHFDKKIRFW--DIRSESIVREMELLGKITA 152

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-----SYFDPVWSPQGDLI 361
              +P+ ++++  S     + L V+    +  K+ +           +   V+SP G  +
Sbjct: 153 LDLNPERTELLSCSR---DDLLKVIDLRTNAIKQ-TFSAPGFKCGSDWTRVVFSPDGSYV 208

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
           A     G  +   V    G  E++L     S++ A  WSPSG  ++
Sbjct: 209 AAGSAEGSLYIWSV--LTGKVEKVLSKQHSSSINAVAWSPSGSHVV 252


>gi|148747331|ref|NP_084481.3| coronin-7 [Mus musculus]
 gi|61221223|sp|Q9D2V7|CORO7_MOUSE RecName: Full=Coronin-7; Short=Crn7; AltName: Full=70 kDa WD repeat
           tumor rejection antigen homolog
 gi|38174587|gb|AAH61006.1| Coronin 7 [Mus musculus]
 gi|74211840|dbj|BAE29267.1| unnamed protein product [Mus musculus]
 gi|148664823|gb|EDK97239.1| coronin 7, isoform CRA_b [Mus musculus]
          Length = 922

 Score = 44.6 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 77/230 (33%), Gaps = 27/230 (11%)

Query: 184 VVSGIIKNSLCVMDRDG-----ANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDIL 237
           V     +  L  +   G          +     + ++  RF P     +A ++YD    L
Sbjct: 559 VAGEDARIRLWRVPPGGLENVLTTPETVLTGHTEKIYSLRFHPLAADVLASSSYD----L 614

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V + D +      ++   +  I +  +S +GK+   +V KD  + +Y     S    + 
Sbjct: 615 TVRIWDLQTGAERLKLQGHQDQIFSLAWSPDGKQLA-TVCKDGHVRVYE-PRSSPLPLQE 672

Query: 298 TNTLFINISAS--YSPDSSQIV---FESDREGKEQLYVMQS-NGSDQKRISQDKEASYFD 351
                    A   +  D   ++   F+S  E + QLY+  +        +  D   S   
Sbjct: 673 GPGPEGGRGARIVWVCDGGCLLVSGFDSRSERQLQLYIADALAQGPSALLGLDVAPSTLL 732

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPS 400
           P + P   L+  T     +  +         E L      L+  ++ SP 
Sbjct: 733 PSYDPDTGLVLLTGKGDTRVFLY--------EVLPEAPFFLECNSFTSPD 774



 Score = 36.9 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 56/148 (37%), Gaps = 13/148 (8%)

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           P  SS G+ A++ +QK          L   A   L N   + +   + P     +  +  
Sbjct: 511 PLLSSGGQVAVLELQKPGR-------LPDTALPTLQNGTAV-MDLVWDPFDPHRLAVAGE 562

Query: 323 EGKEQLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDLIAFTKFSGEKFAI--GVMKKD 379
           + + +L+ +   G +    + +     + + ++S +   +A    +   + +   +    
Sbjct: 563 DARIRLWRVPPGGLENVLTTPETVLTGHTEKIYSLRFHPLAADVLASSSYDLTVRIWDLQ 622

Query: 380 GSQERLLVEDSNLQAPT--WSPSGRSLI 405
              ERL ++    Q  +  WSP G+ L 
Sbjct: 623 TGAERLKLQGHQDQIFSLAWSPDGKQLA 650


>gi|302753570|ref|XP_002960209.1| hypothetical protein SELMODRAFT_266532 [Selaginella moellendorffii]
 gi|300171148|gb|EFJ37748.1| hypothetical protein SELMODRAFT_266532 [Selaginella moellendorffii]
          Length = 310

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 36/269 (13%), Positives = 85/269 (31%), Gaps = 33/269 (12%)

Query: 108 AQVLVTGRVIKEG-KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSI 166
            Q +V     +           RLWD+ +      ++F         +A   S D  Q +
Sbjct: 69  VQDVVISSDSQFALSGSWDGTLRLWDLANGN--TTRRFVGHTKDVLSVA--FSADNRQIV 124

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKV 226
           +G +          S  + + + +    + D+D         S    +   RFSP     
Sbjct: 125 SGSRDK--------SIKLWNTLGECKYTIQDQD---------SHTGWVSCVRFSPVTTNP 167

Query: 227 AYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
              +   + +++V+  +    +    +      + +   S +G     S  KD    ++ 
Sbjct: 168 IIVSGGWDKMVKVW--NLTNCKLRTNLAGHSGYVNSVTVSPDGSLCA-SGGKDGVAMLWD 224

Query: 287 VDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD-QKRISQDK 345
           +  +      L +   I  S  +SP+   +   +     + + +      +  + I  ++
Sbjct: 225 L-AEGKRLYSL-DAGDIIHSLCFSPNRYWLCAATQ----QCVKIWDLESKNIVEEIKPEQ 278

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                   WS  G  + F  ++     + 
Sbjct: 279 PTYCTTLNWSMDGSKL-FAGYTDGVIRVH 306


>gi|269973830|emb|CBE66801.1| CG3004-PA [Drosophila ananassae]
          Length = 312

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 58/151 (38%), Gaps = 11/151 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    S+ + D        + P  D  + +   SP+ + +A    +++    ++ + +  
Sbjct: 139 GSQNGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA--AANNKGNCYIWSLTSSP 196

Query: 247 D------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           D      R  K+I      IL  +FS +  R L++   D    I+  +        L   
Sbjct: 197 DQKMSTLRPTKKIPAHSRYILRCKFSPD-SRLLLTTSGDGTACIWKTE-DFTKWRELCIE 254

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVM 331
                 A++S DS  + F +  +G  +L+ +
Sbjct: 255 NCWVWDAAFSADSKWL-FTASSDGVARLWKL 284



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 48/132 (36%), Gaps = 16/132 (12%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-------MK 377
              +++        +RI  + +AS  D   SP G  +A     G  +   +       M 
Sbjct: 142 NGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSSPDQKMS 201

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------I 431
                +++      +    +SP  R L+ +    GD  + ++  +   +   L      +
Sbjct: 202 TLRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIWKTEDFTKWRELCIENCWV 258

Query: 432 NTPAYASDPQWV 443
              A+++D +W+
Sbjct: 259 WDAAFSADSKWL 270



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 12/144 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------ 291
            V+L D + ++  + +    + I     S +G+    +        I+S+          
Sbjct: 144 SVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA-AANNKGNCYIWSLTSSPDQKMST 202

Query: 292 -NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              T+++       +   +SPDS  ++  S   G     + ++    + R    +    +
Sbjct: 203 LRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIWKTEDFTKWRELCIENCWVW 259

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIG 374
           D  +S     + FT  S     + 
Sbjct: 260 DAAFSADSKWL-FTASSDGVARLW 282


>gi|194766945|ref|XP_001965579.1| GF22378 [Drosophila ananassae]
 gi|190619570|gb|EDV35094.1| GF22378 [Drosophila ananassae]
          Length = 312

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 58/151 (38%), Gaps = 11/151 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    S+ + D        + P  D  + +   SP+ + +A    +++    ++ + +  
Sbjct: 139 GSQNGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA--AANNKGNCYIWSLTSSP 196

Query: 247 D------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           D      R  K+I      IL  +FS +  R L++   D    I+  +        L   
Sbjct: 197 DQKMSTLRPTKKIPAHSRYILRCKFSPD-SRLLLTTSGDGTACIWKTE-DFTKWRELCIE 254

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVM 331
                 A++S DS  + F +  +G  +L+ +
Sbjct: 255 NCWVWDAAFSADSKWL-FTASSDGVARLWKL 284



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 48/132 (36%), Gaps = 16/132 (12%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-------MK 377
              +++        +RI  + +AS  D   SP G  +A     G  +   +       M 
Sbjct: 142 NGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSSPDQKMS 201

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------I 431
                +++      +    +SP  R L+ +    GD  + ++  +   +   L      +
Sbjct: 202 TLRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIWKTEDFTKWRELCIENCWV 258

Query: 432 NTPAYASDPQWV 443
              A+++D +W+
Sbjct: 259 WDAAFSADSKWL 270



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 12/144 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------ 291
            V+L D + ++  + +    + I     S +G+    +        I+S+          
Sbjct: 144 SVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA-AANNKGNCYIWSLTSSPDQKMST 202

Query: 292 -NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              T+++       +   +SPDS  ++  S   G     + ++    + R    +    +
Sbjct: 203 LRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIWKTEDFTKWRELCIENCWVW 259

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIG 374
           D  +S     + FT  S     + 
Sbjct: 260 DAAFSADSKWL-FTASSDGVARLW 282


>gi|194766331|ref|XP_001965278.1| GF24296 [Drosophila ananassae]
 gi|190617888|gb|EDV33412.1| GF24296 [Drosophila ananassae]
          Length = 776

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 14/146 (9%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD--LQSNATERL 297
           +++  +  R  + I    + I + R+S +G   L +  +D  + I+S    L+S   +  
Sbjct: 104 FVILNKSARVERSISAHGAAISSGRWSPDGAGLL-TAGEDGVIKIWSRSGMLRSTVVQ-- 160

Query: 298 TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            N   I+  A ++P+S+ IVF   + G   +  + +N    +   +  +       WS Q
Sbjct: 161 -NEEAIHC-ARWAPNSTSIVFC--QGGHISIKPLAANSKLIR--WRAHDGLVLCLSWSTQ 214

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQE 383
            ++IA     GE F   +    G+  
Sbjct: 215 SNIIA---SGGEDFRFKIWDAQGANL 237



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/237 (13%), Positives = 78/237 (32%), Gaps = 38/237 (16%)

Query: 192 SLCVMDRDG--------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           +L V   DG        A +     +    +   R+SP+   +   T  ++ +++++   
Sbjct: 94  TLLVCSNDGRFVILNKSARVERSISAHGAAISSGRWSPDGAGLL--TAGEDGVIKIW--- 148

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           +R       +      I   R++ N    +    +   + I  +   S    R      +
Sbjct: 149 SRSGMLRSTVVQNEEAIHCARWAPNSTSIVFC--QGGHISIKPLAANSK-LIRWRAHDGL 205

Query: 304 NISASYSPDSSQIVFESDREGKE-QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +  S+S  S+ I       G++ +  +  + G++    S  +E +     ++P+ D + 
Sbjct: 206 VLCLSWSTQSNIIA----SGGEDFRFKIWDAQGANLF-TSAAEEHAITSVAFNPEKDYLL 260

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFSRKKD 411
              F+     + +    G         S   +P        +WS  G  +       
Sbjct: 261 VGTFN----LLKLCHSTG----WTYSSSRFSSPVVGSLFSLSWSADGTQVACGTSTG 309



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 31/218 (14%), Positives = 67/218 (30%), Gaps = 18/218 (8%)

Query: 149 ASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVV-SGIIKNSLCVMDRDGANIRYLT 207
              R +    S  + +SI+      +S       + + +      + +  R G  +R   
Sbjct: 100 NDGRFVILNKSARVERSISAHGAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM-LRSTV 158

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              ++ +   R++PN   + +          + +     +    R      ++L   +S+
Sbjct: 159 VQNEEAIHCARWAPNSTSIVFC-----QGGHISIKPLAANSKLIRWRAHDGLVLCLSWST 213

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                  S  +D    I+  D Q               S +++P+   ++      G   
Sbjct: 214 QSNIIA-SGGEDFRFKIW--DAQGANLFTSAAEEHAITSVAFNPEKDYLLV-----GTFN 265

Query: 328 LYVMQSNGS---DQKRISQDKEASYFDPVWSPQGDLIA 362
           L  +  +        R S     S F   WS  G  +A
Sbjct: 266 LLKLCHSTGWTYSSSRFSSPVVGSLFSLSWSADGTQVA 303


>gi|170755059|ref|YP_001782384.1| hypothetical protein CLD_1796 [Clostridium botulinum B1 str. Okra]
 gi|169120271|gb|ACA44107.1| hypothetical protein CLD_1796 [Clostridium botulinum B1 str. Okra]
          Length = 429

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 36/221 (16%), Positives = 81/221 (36%), Gaps = 28/221 (12%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +  +  Y   D      +  ++       K   +F S I       NG+       +   
Sbjct: 111 SGNEKIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNIW-----INGQWLYYINYRGSN 165

Query: 282 MD--IYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-----ESDREGKEQLYVMQSN 334
            +  +Y +    ++ ERLT+T  I+ S  +S +    +F      S  +   ++Y ++ +
Sbjct: 166 EENCLYRIKKDGSSRERLTDTT-ID-SLVFSDN---YIFYSEYISSSSKDNYKIYRIKKD 220

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
           GS +  +S  +  +         G  + +       ++I  ++ DG   + +   S+   
Sbjct: 221 GSSKIALSNVRGINLIIQ-----GPFLYYLNIED-NYSIYRIRVDGLDMKKINNYSSRNF 274

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA 435
                 G  + +    + + G+ LY   L+G  E  +N  +
Sbjct: 275 MRI-KDG-WIYYI---NEELGNNLYRTTLDGNYEEKLNNDS 310



 Score = 40.4 bits (93), Expect = 0.60,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 77/190 (40%), Gaps = 31/190 (16%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ--L 328
           +    +  +   +I  ++L  +   +L +    NI   +  +   + + + R   E+  L
Sbjct: 115 KIYTYMDYNPHGEIRKINLDGSLNIKLCDDFASNI---WI-NGQWLYYINYRGSNEENCL 170

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT----KFSGEKFAIGVMKKDGSQER 384
           Y ++ +GS ++R++   + +    V+S     I ++      S + + I  +KKDGS + 
Sbjct: 171 YRIKKDGSSRERLT---DTTIDSLVFSDN--YIFYSEYISSSSKDNYKIYRIKKDGSSKI 225

Query: 385 LLVEDSNLQAPTWSPSGRSLI---FSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            L     +           +I   F    + +    +Y I ++G +   IN  +  +  +
Sbjct: 226 ALSNVRGIN---------LIIQGPFLYYLNIEDNYSIYRIRVDGLDMKKINNYSSRNFMR 276

Query: 442 ----WVGFMD 447
               W+ +++
Sbjct: 277 IKDGWIYYIN 286


>gi|220925139|ref|YP_002500441.1| cytochrome c class I [Methylobacterium nodulans ORS 2060]
 gi|219949746|gb|ACL60138.1| cytochrome c class I [Methylobacterium nodulans ORS 2060]
          Length = 426

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 33/239 (13%), Positives = 67/239 (28%), Gaps = 27/239 (11%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +    D  +      P+ +          +  RV L             +    +     
Sbjct: 68  VLRFHDGAVNAVAALPDGRMAT-----GGEDGRVALWQPGRAEPVAVFADHAGPVAGLAV 122

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
           S +G R   S   D  + +++  L   AT  L          ++ PD   +       G 
Sbjct: 123 SPDGARLA-SAAWDGTVRVWA--LAGGATRVLAEHKGNVNGVAFLPDGRVV-----SAGY 174

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE-R 384
           +    +         ++     +      +  G+ I      G    + +++ DGS+   
Sbjct: 175 DATLRIWPEDGAALSVTLPSPLN--AVAATKDGE-IVTACADGS---VRMLRADGSERAA 228

Query: 385 LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
           + +  S + A   SP G        +            ++ R   L+ T      P W 
Sbjct: 229 VAIPPSPVTALALSPDG-------ARVAAATVGGAVAVIDRREARLLLTLVGPGLPVWS 280


>gi|83815102|ref|YP_446857.1| X-Pro dipeptidyl-peptidase [Salinibacter ruber DSM 13855]
 gi|83756496|gb|ABC44609.1| X-Pro dipeptidyl-peptidase [Salinibacter ruber DSM 13855]
          Length = 939

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 40/291 (13%), Positives = 88/291 (30%), Gaps = 53/291 (18%)

Query: 183 SVVSGIIKNSLCVMDRDG---ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
            +     K      + DG    + +      ++   +  ++ + ++ A    D  D+  +
Sbjct: 332 RLTEDGEKYYSYAANNDGRGKTDTKKQEEKGERKAVDISWAKDSRRFALVRSDLRDVEEL 391

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +++    +  P+       M                       +++  DL++    R+ +
Sbjct: 392 WVVHATGNDRPELETFKYPMPGEDSV--------------GRDELWIYDLEAMEKTRVAD 437

Query: 300 TLFINISASYSPD----------SSQIVFES-------------DREGKEQLYVMQSNGS 336
           T + + S S   D            + V+ S             DR  K  L V  +   
Sbjct: 438 TGWTDQSLSILDDRQFRYPGSEAPRRRVWLSEGSDALWYERHSRDRT-KADLVVADAETG 496

Query: 337 DQKRISQDKEASYFDPVWSP----QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           + +R   ++  + +     P     GD + +         +     DG+ E  L E    
Sbjct: 497 EIERTVVEERFNKYFHTQRPELLSNGD-VLWLSERDGWSHLYRYGSDGTVEAQLTEGDWH 555

Query: 393 QAPTWSPSGRS-LIFSRKKDGDTGSK-----LYSIDLNGRNETLINTPAYA 437
                +      + +      + G       LY + L+G    L+N P  A
Sbjct: 556 VDAVKAVDEEEGVAYVSGNGREAGEDPYYDHLYRVQLDGSGVELLN-PGDA 605



 Score = 38.1 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 42/245 (17%), Positives = 85/245 (34%), Gaps = 30/245 (12%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +         +SR   +  S +  +    L V+   G +   L   +  +  E     ++
Sbjct: 364 RKAVDISWAKDSRRFALVRSDLRDVE--ELWVVHATGNDRPELETFKYPMPGEDSVGRDE 421

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM----ILAPR---FSSNGKRALIS- 275
             +    YD E + +  + DT        I + R        APR   + S G  AL   
Sbjct: 422 LWI----YDLEAMEKTRVADTGWTDQSLSILDDRQFRYPGSEAPRRRVWLSEGSDALWYE 477

Query: 276 --VQKDEAMDIYSVDLQSNATER-----LTNTLFINISASYSPDSSQIVFESDREGKEQL 328
              +     D+   D ++   ER       N  F         +   +++ S+R+G   L
Sbjct: 478 RHSRDRTKADLVVADAETGEIERTVVEERFNKYFHTQRPELLSNGD-VLWLSERDGWSHL 536

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK-------FAIGVMKKDGS 381
           Y   S+G+ + ++++             + + +A+   +G +         +  ++ DGS
Sbjct: 537 YRYGSDGTVEAQLTEGDWHVDAVKAV-DEEEGVAYVSGNGREAGEDPYYDHLYRVQLDGS 595

Query: 382 QERLL 386
              LL
Sbjct: 596 GVELL 600


>gi|83771653|dbj|BAE61783.1| unnamed protein product [Aspergillus oryzae]
          Length = 588

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 12/155 (7%)

Query: 256 FRSMILAPRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             S++   RFS +GK       +     D         LQ    ++  N      S  +S
Sbjct: 279 HDSVVCCVRFSRDGKYLATGCNRSAQIFDVTTGQNVATLQDENVDK--NGDLYIRSVCFS 336

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD     F +     +Q+ V        K I    E   +   ++  G  IA +    + 
Sbjct: 337 PDGK---FLATGAEDKQIRVWDIAARTIKHIFTGHEQDIYSLDFAGNGRYIA-SGSGDKT 392

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +  +  DG     L  +  +     SP G  + 
Sbjct: 393 VRLWDI-LDGKLVYTLSIEDGVTTVAMSPDGHYVA 426


>gi|37525432|ref|NP_928776.1| 6-phosphogluconolactonase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|60389395|sp|Q7N6R1|6PGL_PHOLL RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|36784860|emb|CAE13773.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 328

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 46/275 (16%), Positives = 90/275 (32%), Gaps = 22/275 (8%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF-SPN--QQKVAYATYDDEDILRVYLMD 243
           GI      V  + G+           I   P   S +   + +  A+Y   ++    + D
Sbjct: 53  GIRPQFSIVTYQIGSRGELAQQGISSIPGSPTHISTDKQGRFLFSASYSYNNLSVSLIDD 112

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS----NATERLTN 299
             I   P ++        +     + K+ L+   K++ + I+ +  +        E +T 
Sbjct: 113 QGIVGEPVQVIAGLQAPHSANIDWDNKQLLVPCLKEDRVRIFEMAKEGYLTEKRAEEITT 172

Query: 300 TLFIN-ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS--- 355
            +       ++ P+   I   ++ +    +Y         + +     A      WS   
Sbjct: 173 AMGAGPRHMAFHPNQQVIYCINELDSTVDVYRKWEKYRTVQTVDSL-PADLAGVRWSADI 231

Query: 356 ---PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPS--GRSLIFSRK 409
              P G  +  ++ +    +  V+ +DGS   L         P  ++    G+ LI S +
Sbjct: 232 HITPDGRHLYTSERTSSLISHFVISQDGSNLTLAGHYKTEIQPRGFAIDHSGKYLIASGQ 291

Query: 410 KDGDTGSKLYSID-LNGRNETLINTPAYASDPQWV 443
           K         SID   G+   L   P     P WV
Sbjct: 292 KSDHISVS--SIDKYTGKLTELTRYPVGKG-PMWV 323


>gi|260833692|ref|XP_002611846.1| hypothetical protein BRAFLDRAFT_123360 [Branchiostoma floridae]
 gi|229297218|gb|EEN67855.1| hypothetical protein BRAFLDRAFT_123360 [Branchiostoma floridae]
          Length = 353

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 21/165 (12%), Positives = 55/165 (33%), Gaps = 15/165 (9%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           ++ D+  + Q + +    +  +     H  S+ +        G F            SG 
Sbjct: 128 QVLDIIYQPQAVFRVRAVTRCTSTIEGH--SEAVISVAFSPSGRFL----------ASGS 175

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
              ++   D      +Y        +    ++P+ +K+A    + +D   V + D  + R
Sbjct: 176 GDTTVRFWDIYTETPKYTCKGHSHWILALAWAPDGRKLASGCKNAQDG-TVRIWDVVLGR 234

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
               +      +   ++   G+  + +  +D  + ++  D   N 
Sbjct: 235 TLLSLNGHLQSVTCVKW--GGEGLIYTASQDRTIKVWRPDDDGNE 277



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/142 (13%), Positives = 53/142 (37%), Gaps = 14/142 (9%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN--TLFI 303
           + R    I      +++  FS +G+    S   D  +  + +      T + T       
Sbjct: 145 VTRCTSTIEGHSEAVISVAFSPSGRFLA-SGSGDTTVRFWDI---YTETPKYTCKGHSHW 200

Query: 304 NISASYSPDSSQIV--FESDREGKEQLYVMQSNGSDQKRISQDKE-ASYFDPVWSPQGDL 360
            ++ +++PD  ++    ++ ++G  +++ +      +  +S +    S     W   G+ 
Sbjct: 201 ILALAWAPDGRKLASGCKNAQDGTVRIWDVVL---GRTLLSLNGHLQSVTCVKW--GGEG 255

Query: 361 IAFTKFSGEKFAIGVMKKDGSQ 382
           + +T        +     DG++
Sbjct: 256 LIYTASQDRTIKVWRPDDDGNE 277


>gi|194218313|ref|XP_001494764.2| PREDICTED: similar to echinoderm microtubule associated protein
           like 3 [Equus caballus]
          Length = 886

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 12/150 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              LC+ D +G  + +    ++  L    F P+   VA       +  R  ++DT     
Sbjct: 608 DRQLCLWDGEGHALAWSIDLKETGLCA-DFHPSGAVVAVGL----NTGRWLVLDTETREI 662

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINIS 306
              + +    +   R+S +G    I    D  + IYSV      + R             
Sbjct: 663 VSDVTDGNEQLSVVRYSPDGLYLAI-GSHDNMIYIYSVSSDGAKSSRFGRCVGHSSFITH 721

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +S D +   F     G  ++      G 
Sbjct: 722 LDWSKDGN---FIMSNSGDYEILYWDVAGG 748


>gi|91077232|ref|XP_968256.1| PREDICTED: similar to retina aberrant in pattern CG3000-PA isoform
           1 [Tribolium castaneum]
 gi|270002085|gb|EEZ98532.1| hypothetical protein TcasGA2_TC001036 [Tribolium castaneum]
          Length = 483

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 20/187 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN----GKRAL 273
            +S     VA  T+       V + D  +++   ++    + + A  ++ +    G R  
Sbjct: 226 AWSERGHLVAVGTHHG----YVTVWDVSVNKQVNKLQGHSARVGALAWNGDVLSSGSRDR 281

Query: 274 ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK-EQLYVMQ 332
           + +Q+D                RL           +SPD+  +       G   +LYV  
Sbjct: 282 LILQRDTRTPPTV------TERRLVGHRQEVCGLKWSPDNQYLA----SGGNDNRLYVWN 331

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLVEDSN 391
                  +   D  A+     WSP    +  +        I       G   + +   S 
Sbjct: 332 MQSLSPVQTYTDHLAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPMQSVDTGSQ 391

Query: 392 LQAPTWS 398
           +    WS
Sbjct: 392 VCNLAWS 398



 Score = 40.0 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 52/145 (35%), Gaps = 5/145 (3%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           ++SP+ Q +A       +  R+Y+ + +     +   +  + + A  +S +    L S  
Sbjct: 310 KWSPDNQYLA----SGGNDNRLYVWNMQSLSPVQTYTDHLAAVKAIAWSPHHHGLLASGG 365

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
                 I   +  +    +  +T     + ++S  SS++V  +    + Q+ V +     
Sbjct: 366 GTADRCIRFWNTLTGQPMQSVDTGSQVCNLAWSKHSSELV-STHGYSQNQILVWKYPSLT 424

Query: 338 QKRISQDKEASYFDPVWSPQGDLIA 362
           Q                SP G+ I 
Sbjct: 425 QVAKLTGHSYRVLYLALSPDGEAIV 449


>gi|298243401|ref|ZP_06967208.1| hypothetical protein Krac_11937 [Ktedonobacter racemifer DSM 44963]
 gi|297556455|gb|EFH90319.1| hypothetical protein Krac_11937 [Ktedonobacter racemifer DSM 44963]
          Length = 592

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 36/115 (31%), Gaps = 25/115 (21%)

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--- 372
             F+S   G+  L            +    +    +   S  G  I F  +S   +    
Sbjct: 208 FYFDST-SGETLLKRYNPATRQISTVLSLHQTLVTEVQVSGDGQWILFLAWSSTAWDPTY 266

Query: 373 ---------IGVMKKDGSQERLLV------------EDSNLQAPTWSPSGRSLIF 406
                    + V++ DG   + L+               ++ AP+WSP  + + F
Sbjct: 267 GYKLQFPGKLQVVRADGQGLQTLICADQTIPSQSRIGSFDIGAPSWSPDNKHIAF 321



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/260 (13%), Positives = 72/260 (27%), Gaps = 57/260 (21%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEAM- 282
           +          +   +    +    +   ++++   + S +G+  L     S   D    
Sbjct: 208 FYFDSTSGETLLKRYNPATRQISTVLSLHQTLVTEVQVSGDGQWILFLAWSSTAWDPTYG 267

Query: 283 -------DIYSVDLQSNATERLTN-----------TLFINISASYSPDSSQIVFESD--- 321
                   +  V       + L               F   + S+SPD+  I F+     
Sbjct: 268 YKLQFPGKLQVVRADGQGLQTLICADQTIPSQSRIGSFDIGAPSWSPDNKHIAFDYSITS 327

Query: 322 ------REGKEQLYVMQSNGSDQ-KRISQDKEASYFDPVWSPQGDLIA-------FTKFS 367
                 R G   L     +  D     +      Y  P+       +A       +   S
Sbjct: 328 TYYTPARAGTGILDTGDGSLYDAYPAKTIQDNLDYVAPLVWVDNTHLAVAHHFYDYHSSS 387

Query: 368 GEKFAIGVMK-------KDGSQERLLVEDSN--LQAPTWSPSGRSLIFSRKKDG------ 412
              F + ++            Q + LV++ +       ++P  R+L +S    G      
Sbjct: 388 SSLFGVYLLDTAQKRAYTSIKQLKQLVDEGSTFCWDYAFAPDMRTL-YSSDCPGNQEELI 446

Query: 413 -DTGSKLYSIDLNGRNETLI 431
               S + +  LNG     +
Sbjct: 447 SRGTSHIVTHLLNGTTPRPL 466



 Score = 36.9 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 30/243 (12%), Positives = 72/243 (29%), Gaps = 44/243 (18%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--- 285
               D   L+  +   +   +  RIG+F   I AP +S + K                  
Sbjct: 278 VVRADGQGLQTLICADQTIPSQSRIGSFD--IGAPSWSPDNKHIAFDYSITSTYYTPARA 335

Query: 286 ---SVDLQSNATE-----RLTNTLFINISASYSPDSSQIV-------FESDREGKEQLYV 330
               +D    +       +        ++     D++ +        + S       +Y+
Sbjct: 336 GTGILDTGDGSLYDAYPAKTIQDNLDYVAPLVWVDNTHLAVAHHFYDYHSSSSSLFGVYL 395

Query: 331 MQSNG-------SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG--------EKFAIGV 375
           + +            K++  +     +D  ++P    +  +   G            I  
Sbjct: 396 LDTAQKRAYTSIKQLKQLVDEGSTFCWDYAFAPDMRTLYSSDCPGNQEELISRGTSHIVT 455

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSG------RSLIF-SRKKDGDTGSKLYSIDLNGRNE 428
              +G+  R L+  S    P +  +        S+ F   ++    G  ++ ++L+G   
Sbjct: 456 HLLNGTTPRPLLSKSTP--PIFYATHIVAVTRTSIFFQVAQETSGPGYSIWRVNLDGTGL 513

Query: 429 TLI 431
             +
Sbjct: 514 KQV 516


>gi|291387856|ref|XP_002710467.1| PREDICTED: THO complex 3 [Oryctolagus cuniculus]
          Length = 351

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 83/242 (34%), Gaps = 15/242 (6%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           S+ SG  +  L + +   G +     P+    +    +S + +++A  ++D      V+L
Sbjct: 26  SMSSGPSRYVLGMQELFRGHSKTREFPAHSAKVHSVAWSCDGRRLASGSFD--KTASVFL 83

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++                +    +  +     ++   D+ + I+  D+++       NT 
Sbjct: 84  LEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIW--DVRTTKCIATVNTK 141

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
             NI+  +SPD   I       G +   V   +    +  ++++     +   W+   ++
Sbjct: 142 GENINICWSPDGQTIAV-----GNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNM 196

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             F         I    +    + +    SN     + P G+   +      D    L+ 
Sbjct: 197 F-FLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGK---YFATGSADALVSLWD 252

Query: 421 ID 422
           +D
Sbjct: 253 VD 254



 Score = 43.1 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 40/354 (11%), Positives = 98/354 (27%), Gaps = 66/354 (18%)

Query: 82  ISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDR----K 137
           +   +       P        W S+             G  R  +  +  ++       +
Sbjct: 3   VPPAAMGPSTLGPSGPGSMAPWCSM-----------SSGPSRYVLGMQ--ELFRGHSKTR 49

Query: 138 QIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMD 197
           +           +W      ++   +            R++  +     G   + LC   
Sbjct: 50  EFPAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLEKDRLVKENNYRGHGDSVDQLC--- 106

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
                                + P+   +      D+    + + D R  +    + N +
Sbjct: 107 ---------------------WHPSNPDLFVTASGDK---TIRIWDVRTTKCIATV-NTK 141

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
              +   +S +G+   +  + D    I +   +S A E+     F     S++ D++   
Sbjct: 142 GENINICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ---FKFEVNEISWNNDNNMFF 198

Query: 318 FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                 G   + ++        +      ++     + P G   A          + +  
Sbjct: 199 LT---NGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADA---LVSLWD 252

Query: 378 KDGSQERLLVEDSNLQAP----TWSPSGRSLIFSRKKDG------DTGSKLYSI 421
            D  +   +   S L  P    ++S  G+ L  + +         +TG KL+ +
Sbjct: 253 VD--ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEV 304


>gi|238054054|ref|NP_001153904.1| cell division cycle 20 [Oryzias latipes]
 gi|217034831|dbj|BAH02685.1| cell division cycle 20 [Oryzias latipes]
          Length = 501

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 79/231 (34%), Gaps = 22/231 (9%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTP--SRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           S ++++  + NS+ + D    +I  L      +  +    ++ +   +A  T D +    
Sbjct: 193 SHNILAVALHNSVYLWDATKGDIILLMRMEREEDYICSLSWTKDGSYLAVGTSDCK---- 248

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V L D    +  + + +  + + +  ++      L S  +   +  + V +  +    LT
Sbjct: 249 VQLWDVENQKRLRSMSSHTARVGSLSWN---DHILSSGSRSGHIHHHDVRVADHHIFTLT 305

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQS------NGSDQKRI--SQDKEASYF 350
                     +SPD   +       G + L  +         G+D + +    + + +  
Sbjct: 306 THTQEVCGLQWSPDGRYLA----SGGNDNLVCVWPRVHEGSAGNDTQFVNCWSEHQGAVK 361

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPS 400
              W P    I  +        I +     GS    L   S + +  ++P+
Sbjct: 362 ALAWCPWQSNILASGGGTSDRHIRIWNVNSGSCISSLDTQSQVSSLVFAPN 412



 Score = 43.9 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 32/100 (32%), Gaps = 5/100 (5%)

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           S S++ D S +       G     V   +  +QKR+      +      S    +++   
Sbjct: 230 SLSWTKDGSYLAV-----GTSDCKVQLWDVENQKRLRSMSSHTARVGSLSWNDHILSSGS 284

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            SG      V   D     L      +    WSP GR L 
Sbjct: 285 RSGHIHHHDVRVADHHIFTLTTHTQEVCGLQWSPDGRYLA 324


>gi|186683388|ref|YP_001866584.1| hypothetical protein Npun_R3184 [Nostoc punctiforme PCC 73102]
 gi|186465840|gb|ACC81641.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 355

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 22/194 (11%), Positives = 57/194 (29%), Gaps = 19/194 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             S + Q +  A  DD     +   + R  +  + +      + +   S +GKR +    
Sbjct: 68  AISSSGQTLISAGRDD----TIKFWNLRTGKLLRSLDAHSDGVTSIAISPDGKRIV---- 119

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA----SYSPDSSQIVFESDREGKEQLYVMQS 333
               +   ++ +    +  +      +       + S D   I   SD      + +   
Sbjct: 120 -TGGISTPTMKVWDLRSFLMLKGDSGHTQPVETVAISSDGKLIASGSD---DYTIKLWDL 175

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +                   +SP    +  +   G+   I ++     + R +++     
Sbjct: 176 HTLKLLDTITTHSGFVSKVAFSPDMQTLV-SAGGGDDNTIRLIDLQTKKTRHILKGHKTG 234

Query: 394 APTWS--PSGRSLI 405
               +  P  + L+
Sbjct: 235 VDAIAITPDSKKLV 248


>gi|161614981|ref|YP_001588946.1| 6-phosphogluconolactonase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|189027521|sp|A9MTJ8|6PGL_SALPB RecName: Full=6-phosphogluconolactonase; Short=6-P-gluconolactonase
 gi|161364345|gb|ABX68113.1| hypothetical protein SPAB_02735 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 331

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/233 (12%), Positives = 71/233 (30%), Gaps = 14/233 (6%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++        ++ +    +     S + +   + V+ +  + 
Sbjct: 2   KQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL 61

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPD-SSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            Y +     A         +  S +  S D   + VF               +G   + +
Sbjct: 62  AYRIAPDDGALT-FAAESALPGSPTHISTDHHGRFVFVGSYNAGNVSVTRLQDGLPVELV 120

Query: 342 S-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNLQA 394
              ++         +P    +       ++  +  +  DG        E   VE +  + 
Sbjct: 121 DVVERLDGCHSANITPDNRTLWVPALKQDRICLFTLSDDGHLVAQEPAEVNTVEGAGPRH 180

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
             + P+ R   +   +   +       + +G  E   TL   PA  SD +W  
Sbjct: 181 MVFHPN-RQYAYCVNELNSSVDVWQLKNPHGEIECVQTLDMMPADFSDTRWAA 232


>gi|42570993|ref|NP_973570.1| ARPC1A (ACTIN-RELATED PROTEIN C1A); actin binding / nucleotide
           binding [Arabidopsis thaliana]
 gi|330253362|gb|AEC08456.1| actin-related protein C1A [Arabidopsis thaliana]
          Length = 378

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 80/233 (34%), Gaps = 26/233 (11%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
           H  +    +SIT      +  ++ +  +     I  SL    +D     ++    DQI+ 
Sbjct: 7   HRFA----ESITCHAWSPDLSMVALCPNNTEVHIYKSL---SQDHWERLHVLQKHDQIVS 59

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN------- 268
              +S    K+   ++D      V+ ++         I       L  ++S         
Sbjct: 60  GIDWSSKSNKIVTVSHDRNS--YVWSLEGAEWVPTLVILRLNRAALCVQWSPKENKFAVG 117

Query: 269 --GKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINISASYSPDSSQIVFESDRE 323
              K   I   + E     S  ++      +T+        + A+ S D    VF +  +
Sbjct: 118 SGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIK 177

Query: 324 GKEQLYVMQSNGS----DQKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEKF 371
           G +  Y    NG+     Q+ +  D   S+ F   WSP G+ +A+   S   +
Sbjct: 178 GVDTKYAHYLNGAFFLLKQQILQLDLSYSWAFGVKWSPSGNTLAYVGHSSMIY 230



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 82/233 (35%), Gaps = 44/233 (18%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRALI 274
            +SP+   VA       +   V++  +      +R+        ++    +SS   + + 
Sbjct: 17  AWSPDLSMVALC----PNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKSNKIV- 71

Query: 275 SVQKDEAMDIYSVDLQSNATE----RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +V  D    ++S++           RL N   + +   +SP  ++    S   G + + +
Sbjct: 72  TVSHDRNSYVWSLEGAEWVPTLVILRL-NRAALCVQ--WSPKENKFAVGS---GAKTVCI 125

Query: 331 MQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGS--- 381
                 +     K I +  E+S     W P   L+A T   G    F+  +   D     
Sbjct: 126 CYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKGVDTKYAH 185

Query: 382 ---------QERLLVED---SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    ++++L  D   S      WSPSG +L +         S +Y +D
Sbjct: 186 YLNGAFFLLKQQILQLDLSYSWAFGVKWSPSGNTLAYV-----GHSSMIYFVD 233


>gi|26246631|ref|NP_752671.1| hypothetical protein c0741 [Escherichia coli CFT073]
 gi|26107030|gb|AAN79214.1|AE016757_118 Hypothetical protein c0741 [Escherichia coli CFT073]
          Length = 625

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 68/221 (30%), Gaps = 13/221 (5%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM-DTRIDRAPKRIGNF 256
             G  I+ +T       F    S +  K          +  + L+    +   P    + 
Sbjct: 382 ATGEIIQSITTGAHPDSFI--LSRDGTKAWVMNRTSNSVSAIDLVAYQHVADIPLEKYDG 439

Query: 257 RSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             M   P       S + K  L+       +   +            N   +  +  + P
Sbjct: 440 TGMSGKPGAWVMALSPDEKTLLVPGAGRGNIVRINTITHQKEDFPAGNARGVVSAMGFRP 499

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            + +I+F  D +G  ++       S   +      + Y     SP G  +A   +  + +
Sbjct: 500 KNGEIIFA-DSQGISRIRAEDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQGY 556

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            I ++  +  Q   +   S      +S  GR + F   K+G
Sbjct: 557 VI-LLNINAGQIIGVYPASYPNNVRFSADGRKI-FVMAKNG 595


>gi|320583035|gb|EFW97251.1| Dipeptidyl aminopeptidase, synthesized as a glycosylated precursor
           [Pichia angusta DL-1]
          Length = 802

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 37/102 (36%), Gaps = 21/102 (20%)

Query: 285 YSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
           + +++ S     L N   +   A +SPDSS I F  D      +YV     ++ ++++ +
Sbjct: 173 FVLEVDSKKISPLYNGTSLVSLAKWSPDSSSIAFIVD----NNVYVKNLASNEVRQVTFE 228

Query: 345 KEASYFDPV-----------------WSPQGDLIAFTKFSGE 369
                F                    WSP  + +   +F+  
Sbjct: 229 GGTEIFYGKPDWVYEEEVFEGDTAMWWSPNSEYLTILRFNDT 270


>gi|303240016|ref|ZP_07326538.1| hypothetical protein AceceDRAFT_1886 [Acetivibrio cellulolyticus
           CD2]
 gi|302592495|gb|EFL62221.1| hypothetical protein AceceDRAFT_1886 [Acetivibrio cellulolyticus
           CD2]
          Length = 450

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 74/230 (32%), Gaps = 31/230 (13%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L         ++I N     +   +S  G    +S         + V+  +     L N 
Sbjct: 96  LYSVNPKGISRKITNIGGRHI---WSV-GDNLYVSSDNSAPSSTFKVNPSNGENTLLLNG 151

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQ------SNGSDQKRISQDKEASYFDPVW 354
             I  S     D+  + F S  +  +++Y          N    ++I     +++   + 
Sbjct: 152 T-IEYS---DADNETLYFTSPVKSVKKIYKFDGLYKFDLNTYKTEKIFDANNSTFCKYLT 207

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----------EDSNLQAPTWSPSGRSL 404
              G +  +T       +I       S+  +L           ED +   P  S  G  L
Sbjct: 208 VIDGKMYYYTLTKDNTVSINCYDMKNSKITVLTTDKPDSDISHEDYSYTVPQLSACGEWL 267

Query: 405 IF-SRKKDGDTG---SKLYSIDLNGRNETLIN---TPAYASDPQWVGFMD 447
           I+      G        +Y I  +G ++  +N   T  + +   W+ ++D
Sbjct: 268 IYCVGAYQGSGACFYGNMYRIKPDGTDKASMNISCTGDFLTCDNWIYYID 317


>gi|256076846|ref|XP_002574720.1| smu-1 suppressor of mec-8 and unc-52 homolog [Schistosoma mansoni]
 gi|238659933|emb|CAZ30953.1| putative smu-1 suppressor of mec-8 and unc-52 homolog [Schistosoma
           mansoni]
          Length = 514

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 58/172 (33%), Gaps = 18/172 (10%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---------SY 309
            +   RFS +G+  + +   D  ++++  +  +    +       +            ++
Sbjct: 216 HVECARFSPDGQFLV-TGSVDGFIEVW--NFTTGKLRKDLKYQAQDTFMMMEDSVLCLTF 272

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S DS  +     ++G  +++ +  NG   KR+ +          +S     I        
Sbjct: 273 SRDSEMLA-SGAKDGTIKIWRI-QNGQCLKRLEKAHHKGVTAIQFSKDNTHILSASLDHS 330

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              I  MK     +        + +  + P G ++I       D   +++SI
Sbjct: 331 -IRIHGMKSCKIIKEFTGHTGVVNSVAFLPDGHNII---SGSADGSVRIWSI 378


>gi|256076844|ref|XP_002574719.1| hypothetical protein [Schistosoma mansoni]
 gi|238659932|emb|CAZ30952.1| WD-repeat protein, putative [Schistosoma mansoni]
          Length = 509

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/172 (13%), Positives = 58/172 (33%), Gaps = 18/172 (10%)

Query: 259 MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA---------SY 309
            +   RFS +G+  + +   D  ++++  +  +    +       +            ++
Sbjct: 211 HVECARFSPDGQFLV-TGSVDGFIEVW--NFTTGKLRKDLKYQAQDTFMMMEDSVLCLTF 267

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S DS  +     ++G  +++ +  NG   KR+ +          +S     I        
Sbjct: 268 SRDSEMLA-SGAKDGTIKIWRI-QNGQCLKRLEKAHHKGVTAIQFSKDNTHILSASLDHS 325

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              I  MK     +        + +  + P G ++I       D   +++SI
Sbjct: 326 -IRIHGMKSCKIIKEFTGHTGVVNSVAFLPDGHNII---SGSADGSVRIWSI 373


>gi|187731357|ref|YP_001879335.1| peptidase, S54 (rhomboid) family [Shigella boydii CDC 3083-94]
 gi|187428349|gb|ACD07623.1| peptidase, S54 (rhomboid) family [Shigella boydii CDC 3083-94]
          Length = 625

 Score = 44.6 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 35/254 (13%), Positives = 83/254 (32%), Gaps = 26/254 (10%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T            S +  K          +  +      ++ D  +++   
Sbjct: 382 ATGEIIQSITTGAHPDSLI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 439

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASY 309
              + +        S + +  L+        +I  ++  ++  E            +  +
Sbjct: 440 AGTSGKPGAWVMALSPDERTLLVPGA--GRGNIVRINTITHQKEDFPAGDARGTISAMRF 497

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
            P++ +++F  D +G  ++ V     S   +      + Y     SP G  +A   +  +
Sbjct: 498 RPENGEVIFA-DSQGISRISVGAQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQ 554

Query: 370 KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D       
Sbjct: 555 GYVI-LLNINAGQIIGVYPASYVNHLRFSADGRKI-FVMAKNG-----LIQMDRT----R 603

Query: 430 LINTPAYASDPQWV 443
            ++  A    PQ+ 
Sbjct: 604 SLDPQAIIRHPQYG 617


>gi|325191950|emb|CCA26420.1| guanine nucleotidebinding protein subunit beta2like protein
           putative [Albugo laibachii Nc14]
          Length = 318

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 89/241 (36%), Gaps = 24/241 (9%)

Query: 199 DGANIR---YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
           DG N +    +  SR+        S ++  + +    D +               +R+  
Sbjct: 14  DGHNGKCVSSIATSRENPNLLLTASHDKSVLVWQLTSDGESC---------GFPRRRLLG 64

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSS 314
               +     SS+G +  +S   D  + ++  DL +  T R       ++ S ++S D+ 
Sbjct: 65  HAHYVQDVVISSDG-QFALSGSWDSTLRLW--DLNTGNTTRRFVGHTKDVLSVAFSADNR 121

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQG-DLIAFTKFSGEKFA 372
           QIV  S     + + +  + G  +  I+++  + +   V +SP   + +  +    +   
Sbjct: 122 QIVSASR---DKTIKLWNTLGECKYTITENGHSEWVSCVRFSPSSSNPLIVSCGWDKAVK 178

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           I  +        LL     L + T SP G   I +     D  + L+ ++   R  +L+ 
Sbjct: 179 IWNLTNCKLHTNLLGHTGYLNSVTVSPDGS--ICASG-GKDGTANLWDLNEGKRLYSLVA 235

Query: 433 T 433
            
Sbjct: 236 G 236


>gi|291243993|ref|XP_002741884.1| PREDICTED: achalasia, adrenocortical insufficiency, alacrimia
           (Allgrove, triple-A)-like [Saccoglossus kowalevskii]
          Length = 497

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/220 (15%), Positives = 80/220 (36%), Gaps = 31/220 (14%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           + L+ +    + +  + P+   +  A+   +  + V+ +        +R+G     +   
Sbjct: 238 QILSQTSHSPVTQICWHPSGDLLLSAS-PTDTAMMVWNVAMETCVPLRRLG--GGGVSLL 294

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           R+S +G + + +        ++    Q+ + ER +N      SA +SP    ++F    E
Sbjct: 295 RWSPDGSK-VFAATPSSVFRVWE--SQTWSCERWSNLSGRCQSACWSPLGDILLFTVTEE 351

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               +Y +  + S+          +  + V       +A      E   I +        
Sbjct: 352 --PVIYSLPFHDSNST--IFGSNQTAVNCV------NLAEITMETEDEEICI-------- 393

Query: 384 RLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDTGSKLYSI 421
                  ++Q   W P+G    ++FS K++ +    L ++
Sbjct: 394 -----GGSIQDMAWDPTGERLAILFSGKQESNNTGHLVAL 428


>gi|190896144|gb|ACE96585.1| U5 snRNP-specific protein-like factor [Populus tremula]
          Length = 215

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 35/227 (15%), Positives = 71/227 (31%), Gaps = 23/227 (10%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +       + +  ++ +  ++  A+ D      V   D    +  K++    S + + 
Sbjct: 4   FMVMRGHKNAVLDLHWTADGSQIISASPDK----TVRAWDVDTGKQIKKMAEHSSFVNSC 59

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             S  G   ++S   D    ++  DL+     +     +   + S+S D+S  +F    +
Sbjct: 60  CPSRRGPPLVVSGSDDGTSKLW--DLRQKGAIQTFPDKYQITAVSFS-DASDKIFTGGID 116

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               + V      +     +  +        SP G  +  T     K  I  M+    Q 
Sbjct: 117 --NDVKVWDIRKGEVTMTLEGHQDMITSMQLSPDGSYLL-TDGMDNKLCIWDMRPYAPQN 173

Query: 384 RL--LVEDSNLQA------PTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           R   + E             +WSP G  +       G     +Y  D
Sbjct: 174 RRVKIFEGHQHNFEKHLLKCSWSPDGSEV-----TAGSADRMVYIWD 215


>gi|186683971|ref|YP_001867167.1| hypothetical protein Npun_R3840 [Nostoc punctiforme PCC 73102]
 gi|186466423|gb|ACC82224.1| WD-40 repeat protein [Nostoc punctiforme PCC 73102]
          Length = 352

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 31/228 (13%), Positives = 71/228 (31%), Gaps = 31/228 (13%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
             + V D D   I       +  +    +  + Q +A + Y    I      D       
Sbjct: 120 RYVQVWDVDTHEIVVTLNFDNSSVLGIDWRIDGQYLAISGYKGVKIWHSQNWDEEPYSL- 178

Query: 251 KRIGNFRSMILAPRFSSNGKRAL-------ISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +  ++ LA  +S +GK          ++V +    D + +        +L      
Sbjct: 179 ----DMTTVSLAMAWSPDGKFLASGNMDRSVTVLEWNNPDPWVMRGFPGKIRQL------ 228

Query: 304 NISASYSPD----SSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQG 358
               ++S       + I+  S  EG      ++ +    + R+  +   +     ++P+ 
Sbjct: 229 ----AWSEAMTKVGAPILASSSVEGIVVWEKLEDDTLGWEARVLTNHVGTINAIAFAPKS 284

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLI 405
            L+A     G    + +  +     +++           W P G+ L 
Sbjct: 285 FLLASAAADGW---LCLWNQAKEVSQIITGVSGGFSTLAWHPQGKLLA 329



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/190 (13%), Positives = 50/190 (26%), Gaps = 46/190 (24%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPD 312
           G     + A  +S  GK    +    E      V         L      ++   ++SPD
Sbjct: 16  GTLSDYVTAIAWSPQGKTLAATSAAGE-----VVLWNDGELTTLQTGNGKSVDCLAFSPD 70

Query: 313 SSQIVFESDREGKEQLY-------------------------------------VMQSNG 335
              +     ++G+ +++                                     V   + 
Sbjct: 71  GKFLA-VGGQDGQVKIWQNTELIATLENAPAWVDKLAWNYTSNQLAFSLGRYVQVWDVDT 129

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
            +         +S     W   G  +A + + G    I   +    +   L   +   A 
Sbjct: 130 HEIVVTLNFDNSSVLGIDWRIDGQYLAISGYKG--VKIWHSQNWDEEPYSLDMTTVSLAM 187

Query: 396 TWSPSGRSLI 405
            WSP G+ L 
Sbjct: 188 AWSPDGKFLA 197


>gi|312197185|ref|YP_004017246.1| NB-ARC domain protein [Frankia sp. EuI1c]
 gi|311228521|gb|ADP81376.1| NB-ARC domain protein [Frankia sp. EuI1c]
          Length = 1375

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 38/234 (16%), Positives = 68/234 (29%), Gaps = 18/234 (7%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--- 278
           +   +            V + + R    P             RF+++G R + +VQ    
Sbjct: 615 DGSWLGSVGSAASGQAAVGIWNPRGGPEPAERTVGEGRASFLRFAADGSRLVAAVQPKDK 674

Query: 279 ----DEAMDIYSVDLQSNATER--LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
               D  +++  VD  +    R  +T        A  +PD+S      D  G   L  + 
Sbjct: 675 PPYEDRWIEVVLVDTATGDPVREPITLRPAAKYLAV-APDASWFA-ALDATGTLTLTSLT 732

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           S     +R     E        +  G L+           + +    G    L  +   +
Sbjct: 733 SGDELLRR-----EGLTGPLKIAAHGSLLVAQASENSGL-VALEPLTGKVMSLPGDGGRI 786

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR-NETLINTPAYASDPQWVGF 445
                 P G  +  + + +            +G   + L    A A D  WV F
Sbjct: 787 DDFLVGPDGDWVASTGRTNRIWNPATGRSTAHGAVTDHLSVDLAAAPDGSWVAF 840


>gi|167622608|ref|YP_001672902.1| hypothetical protein Shal_0668 [Shewanella halifaxensis HAW-EB4]
 gi|167352630|gb|ABZ75243.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4]
          Length = 317

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 18/96 (18%)

Query: 275 SVQKDEAMDIYSVDLQSNAT-------ERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           ++     + IY ++ Q N           +T     +   ++SPDSSQ++F SDR+    
Sbjct: 26  ALAAGFDIWIYKLNYQDNQQQWTVTDGRPVTERDGYDNQPNFSPDSSQLLFTSDRQAAPN 85

Query: 328 -----------LYVMQSNGSDQKRISQDKEASYFDP 352
                      +Y  Q   S  ++++   E S + P
Sbjct: 86  SNSQTPAAHNDIYQFQIADSHIEQLTFTPEQSEYSP 121


>gi|32471006|ref|NP_863999.1| WD-40 repeat-containing regulatory protein [Rhodopirellula baltica
           SH 1]
 gi|32396708|emb|CAD71673.1| probable WD-40 repeat regulatory protein [Rhodopirellula baltica SH
           1]
          Length = 981

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 60/175 (34%), Gaps = 14/175 (8%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT---ERLT 298
            +    +    IGNF   + A   S++ +    +    +   +   D+ + +      L 
Sbjct: 810 WEIATGKEISMIGNFEGPVKAVHLSADERTMFAT----DGATLVEADMHTGSPISKRPLN 865

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +     SA++SPD + +   +D      + V   N   +       E  +    ++P  
Sbjct: 866 RSWASGQSAAFSPDGAWLA-VAD---TYNIRVWDLNTFRELEPLIGNETLWTMC-FAPDN 920

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             + F    G K  +   +++   +R  +E   +Q+   S  GR         G 
Sbjct: 921 QHL-FAGARG-KVDVWEFQRNARLQRQSIERGYIQSLAVSADGRHFAAVGSIGGS 973


>gi|19527184|ref|NP_598727.1| TAF5-like RNA polymerase II p300/CBP-associated factor-associated
           factor 65 kDa subunit 5L [Mus musculus]
 gi|46577528|sp|Q91WQ5|TAF5L_MOUSE RecName: Full=TAF5-like RNA polymerase II p300/CBP-associated
           factor-associated factor 65 kDa subunit 5L; AltName:
           Full=PCAF-associated factor 65 beta; Short=PAF65-beta
 gi|15488839|gb|AAH13550.1| TAF5-like RNA polymerase II, p300/CBP-associated factor
           (PCAF)-associated factor [Mus musculus]
 gi|26329141|dbj|BAC28309.1| unnamed protein product [Mus musculus]
 gi|148679816|gb|EDL11763.1| mCG130952 [Mus musculus]
          Length = 589

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 69/240 (28%), Gaps = 26/240 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDM----SIRYWDLGSFTNTVLYQGHAYPVWDVDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+      ++    + P+S+ +   S   
Sbjct: 393 SP--FSLYFASGSHDRTARLWSFDR--TYPLRIYAGHLADVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              L     ++ +  +SP    +  +     D   +++ I       T  NTPA  S  +
Sbjct: 503 FKELRGHTDSITSLAFSPDSGLIASASM---DNSVRVWDI-----RSTCCNTPADGSSGE 554



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 438 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQ----RLK 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 494 LWDLASGTLFKELRGHTDSITSLAFSPDSGLIA-SASMDNSVRVWDI 539


>gi|328870001|gb|EGG18376.1| hypothetical protein DFA_03870 [Dictyostelium fasciculatum]
          Length = 410

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 81/227 (35%), Gaps = 27/227 (11%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            + LT    Q +   RF+  Q+     +   +  ++V    T      + +  F  + LA
Sbjct: 100 EKDLTHVHSQNILALRFAAIQESTLLVSASTDKTIKVIDAATY-----EVLNTFVDLALA 154

Query: 263 P----RFSSNGKRALISVQKDEAMDIYSVD---LQSNATERLTNTLFINISASYSPDSSQ 315
           P     F+      L++   D +  +  +          ++  N +   + A +SP  ++
Sbjct: 155 PFISLDFNPIHPNLLLASSVDGSTVLLEISNDGKDGKVLQQFKNHVKYVVRARWSPCGTK 214

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRI----SQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
               S     + L +   +  DQ +     S + + +    +++P    +  T      +
Sbjct: 215 FATCSY---DKTLCLYTLSNQDQWQFNMIKSFEFQFNLESLIFTPDSKKVI-TACRETNY 270

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWS-------PSGRSLIFSRKKD 411
              +  +D S E+  +  +     ++S       P+ + L+ S  ++
Sbjct: 271 LQYIDTEDFSIEKYNMNSNGDDHVSFSAMEFSITPNQKYLLVSTDRN 317


>gi|313241358|emb|CBY33630.1| unnamed protein product [Oikopleura dioica]
          Length = 708

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 67/190 (35%), Gaps = 20/190 (10%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL- 289
             D+D L +  +    +   +++      +     S        S  +D  + ++S+ + 
Sbjct: 413 MLDKDRLELENILQVSETPTRKLLGHTGAVYGVSISPRKDFLA-SGGEDGTVRLWSLFVY 471

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKE 346
           Q     R    L+     ++SP  +   F S   DR     + V  ++  +  R+     
Sbjct: 472 QCIIVHR--GHLWPVWDVTFSPYGNY--FCSVGMDRS----VRVWVTDKENPIRMMAGHY 523

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLV-EDSNLQAPTWS-PSGRS 403
           +      + P G+ IA     GE   I +    DG   R L    S++   +WS   G+ 
Sbjct: 524 SDVTVCKFHPNGNYIA---TGGEDRCIRLWDILDGKCVRQLTGHRSSISVLSWSTACGKY 580

Query: 404 LIFSRKKDGD 413
           L  +    G 
Sbjct: 581 LA-TADIGGH 589



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 49/144 (34%), Gaps = 6/144 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +          +       +++  FSP      + +   +  +RV++ D  
Sbjct: 456 SGGEDGTVRLWSLFVYQCIIVHRGHLWPVWDVTFSPYGN--YFCSVGMDRSVRVWVTDKE 513

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + +    S +   +F  NG     +  +D  + ++ + L      +LT       
Sbjct: 514 --NPIRMMAGHYSDVTVCKFHPNGNYIA-TGGEDRCIRLWDI-LDGKCVRQLTGHRSSIS 569

Query: 306 SASYSPDSSQIVFESDREGKEQLY 329
             S+S    + +  +D  G    +
Sbjct: 570 VLSWSTACGKYLATADIGGHVLFW 593


>gi|254412682|ref|ZP_05026455.1| peptidase, S9A/B/C family, catalytic domain protein [Microcoleus
           chthonoplastes PCC 7420]
 gi|196180417|gb|EDX75408.1| peptidase, S9A/B/C family, catalytic domain protein [Microcoleus
           chthonoplastes PCC 7420]
          Length = 645

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 60/171 (35%), Gaps = 26/171 (15%)

Query: 284 IYSVDLQSNATERLT-NTLFINISASYSPDSSQIVFESDREGKE-----QLYVMQSNG-- 335
           + S+ L +    ++         S   SPD SQ+ + +           QL+V    G  
Sbjct: 153 LVSIPLNNRNDIQIIATGNDFYASPRLSPDGSQLTWLTWNHPNMPWDGTQLWVASIQGNG 212

Query: 336 --SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
              + K I+   + S F P WSP G  + F       + +    + G +  L   ++   
Sbjct: 213 LLGEAKCIAGGVDESIFKPEWSPDGT-LYFVWDRTGWWNLYRWNQQGIEP-LCEMEAEFG 270

Query: 394 APTW----------SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            P W          S     LI +    G    +L SIDL  +    I TP
Sbjct: 271 LPQWVFGMSTYGISSRD--RLICAYTVQGRW--RLGSIDLQTKQFNPIETP 317



 Score = 43.5 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 40/118 (33%), Gaps = 9/118 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR--- 238
            S       N+L  +  +  N   +  + +     PR SP+  ++ + T++  ++     
Sbjct: 142 HSDEGKEPINTLVSIPLNNRNDIQIIATGNDFYASPRLSPDGSQLTWLTWNHPNMPWDGT 201

Query: 239 ----VYLMDTRIDRAPKRI-GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS 291
                 +    +    K I G     I  P +S +G        +    ++Y  + Q 
Sbjct: 202 QLWVASIQGNGLLGEAKCIAGGVDESIFKPEWSPDGT-LYFVWDRTGWWNLYRWNQQG 258



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 43/129 (33%), Gaps = 15/129 (11%)

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF-----AIGVMKKDG 380
             L  +  N  +  +I       Y  P  SP G  + +  ++          + V    G
Sbjct: 151 NTLVSIPLNNRNDIQIIATGNDFYASPRLSPDGSQLTWLTWNHPNMPWDGTQLWVASIQG 210

Query: 381 S---QERLLVEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           +    E   +     ++   P WSP G  L F   + G     LY  +  G  E L    
Sbjct: 211 NGLLGEAKCIAGGVDESIFKPEWSPDGT-LYFVWDRTG--WWNLYRWNQQG-IEPLCEME 266

Query: 435 AYASDPQWV 443
           A    PQWV
Sbjct: 267 AEFGLPQWV 275


>gi|195031851|ref|XP_001988401.1| GH11144 [Drosophila grimshawi]
 gi|193904401|gb|EDW03268.1| GH11144 [Drosophila grimshawi]
          Length = 788

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 75/232 (32%), Gaps = 28/232 (12%)

Query: 192 SLCVMDRDG--------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           +L +   DG        A +     +    +   R+SP+   +  A  D   +++++   
Sbjct: 95  TLLICSNDGRFIILNKSARVERSISAHTAAISSGRWSPDGAGLLTAAED--GVVKIW--- 149

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           +R       +      I   R++ +      S  +   + I  +   S    R      +
Sbjct: 150 SRSGMLRSTVIQSDEAIRCARWAPSSTAIAFS--QGGHISIKPLAANSK-LIRWRAHDGL 206

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +S S+S  S+ I          +  +  + G++    S  +E +     ++P+ D +  
Sbjct: 207 VLSLSWSTQSNIIA---SGGEDFRFKIWDAQGANLYS-SAAEEYAITSVAFNPEKDYLLV 262

Query: 364 TKFSGEKFAIGVMKKDG---SQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
             F+     + +    G   S  R       +    +WS  G  +       
Sbjct: 263 GTFN----MLKLCHSTGWSYSSARFTAPSVGSFYTLSWSTDGTQVACGTSTG 310


>gi|327404889|ref|YP_004345727.1| OmpA/MotB domain-containing protein [Fluviicola taffensis DSM
           16823]
 gi|327320397|gb|AEA44889.1| OmpA/MotB domain protein [Fluviicola taffensis DSM 16823]
          Length = 688

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 45/229 (19%), Positives = 83/229 (36%), Gaps = 50/229 (21%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMD-----IYSVDLQSNA--------TERL---TNTLFI 303
            +AP  S++G   ++S  +  + +     IY  D+ S++          +L    N+   
Sbjct: 193 DIAPSISTDGSEMILSSNRPNSHEPNALGIYDYDIYSSSLLDNGWSTPTKLVGPINSNND 252

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNG---SDQKRIS--------QDKEASYFDP 352
           +IS   S D ++++   +  G+  ++  +  G   SD +R+S         +K ASY + 
Sbjct: 253 DISNCLSYDGTKMLLHRESGGQTDIFESKLKGLEWSDPQRLSIFISSDKNNEKYASYNED 312

Query: 353 VW----SPQ------GDLIAFTKFSGE---KFAIGVMKKDGSQERLLVEDSNLQAPTW-S 398
            W    S        G  + F+    +    F I  M          V       P +  
Sbjct: 313 GWKIYFSRDNSLRETGSEVMFSGMQNKMKQDFMIATMLTG-------VNSKFNDGPIYIH 365

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
             G S+  +   +G  G   Y I L+ + +    TP     P    + D
Sbjct: 366 IDGESMYIAS--EGHEGMGGYDIFLSKKVQGQWTTPVNLGYPINTPYDD 412


>gi|310796283|gb|EFQ31744.1| eukaryotic translation initiation factor eIF2A [Glomerella
           graminicola M1.001]
          Length = 698

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 47/347 (13%), Positives = 103/347 (29%), Gaps = 57/347 (16%)

Query: 88  KQKITNPDSIPRFQDWNSL-----GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGK 142
             K  N D+    + W ++     GA  L  G+ +++ +    +++   +    +Q+  +
Sbjct: 95  PGKDENGDATKNLKVWRTVEEGLAGADKLPLGKYVQKSQGGWNLQYTADEKFCARQVTNE 154

Query: 143 KFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN 202
             F        + + +  +         G  +S  +F+ E            V       
Sbjct: 155 VQFYESHDLGTVWNKLRVEGVADFALAPGRSHSVAVFIPERKGQPAAVKVYNV------- 207

Query: 203 IRYLTPSRDQILFEPRF-SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
                         P+F SP  QK  +      D +++               +      
Sbjct: 208 --------------PQFTSPISQKTFF----KGDKVQLKWNKLGTSILVLAQTDVDKSNK 249

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINISASYSPDSSQI-VFE 319
                                 +Y + +  +   R++ +        ++SP+S +  V  
Sbjct: 250 ---------------SYYGETTLYLLSVNGSFDARVSLDKEGPIHDVTWSPNSKEFGVVY 294

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
                K  ++  ++  +    +           ++SP G       F      I V   +
Sbjct: 295 GYMPAKTTIFNHRAVATHSFPL-----GPRNTIIFSPTGRFALVAGFGNLAGQIDVYDLE 349

Query: 380 GSQERL-LVEDSNLQAPTWSPSGRSLIFSRKKDG---DTGSKLYSID 422
               +L  +E  N    TWSP  R +I +        D G K++ + 
Sbjct: 350 KDFRKLHTIESGNPSVCTWSPDSRYIITATTSPRLRVDNGIKIWHVS 396



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 70/191 (36%), Gaps = 20/191 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +S  S   + +L ++  +G+    ++  ++  + +  +SPN ++             +
Sbjct: 244 VDKSNKSYYGETTLYLLSVNGSFDARVSLDKEGPIHDVTWSPNSKEFGVVYGYMPAKTTI 303

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPR----FSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           +           R     S  L PR    FS  G+ AL++   + A  I   DL+ +  +
Sbjct: 304 FNH---------RAVATHSFPLGPRNTIIFSPTGRFALVAGFGNLAGQIDVYDLEKDFRK 354

Query: 296 RLTNTLFINISASYSPDSSQI--VFESDREG-KEQLYVMQSNGSDQKRISQDKEASYFDP 352
             T         ++SPDS  I     S R      + +   +G     +  +     +  
Sbjct: 355 LHTIESGNPSVCTWSPDSRYIITATTSPRLRVDNGIKIWHVSG---PLMYNEDMVELYHV 411

Query: 353 VWSP-QGDLIA 362
           VW P   D +A
Sbjct: 412 VWRPQDTDKVA 422


>gi|302683959|ref|XP_003031660.1| hypothetical protein SCHCODRAFT_67852 [Schizophyllum commune H4-8]
 gi|300105353|gb|EFI96757.1| hypothetical protein SCHCODRAFT_67852 [Schizophyllum commune H4-8]
          Length = 414

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/154 (12%), Positives = 49/154 (31%), Gaps = 10/154 (6%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY--SVDLQSNATERL 297
           Y+ D        R+      + +  +S +G+    +   D  + ++           E L
Sbjct: 98  YIWDITDGEVLVRLTGHTDSVTSTAWSHDGEMVA-TGGMDGKVRLWRRVGKEDWRTWEFL 156

Query: 298 TNTLFIN--ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           T     +  +   + P  + ++  S+      L++ Q    +  ++            ++
Sbjct: 157 TELQGPDEVMFLRWHPKGNVLLAGSN---DTTLWLWQLPSGNIMQVFAGHTGPVQCGEFT 213

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           P G  I      G+   +    +D +    L  D
Sbjct: 214 PDGKNI--ISACGDGVFLYWNPRDPAPIFKLTPD 245



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 7/135 (5%)

Query: 186 SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL--RVYLM 242
           SG   +   + D  DG  +  LT   D +     +S + + VA    D +  L  RV   
Sbjct: 90  SGGEDDMGYIWDITDGEVLVRLTGHTDSVTST-AWSHDGEMVATGGMDGKVRLWRRVGKE 148

Query: 243 DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLF 302
           D R       +      ++  R+   G   L++   D  + ++ +    N  +       
Sbjct: 149 DWRTWEFLTEL-QGPDEVMFLRWHPKGN-VLLAGSNDTTLWLWQLP-SGNIMQVFAGHTG 205

Query: 303 INISASYSPDSSQIV 317
                 ++PD   I+
Sbjct: 206 PVQCGEFTPDGKNII 220


>gi|302404760|ref|XP_003000217.1| transcription initiation factor TFIID subunit 5 [Verticillium
           albo-atrum VaMs.102]
 gi|261360874|gb|EEY23302.1| transcription initiation factor TFIID subunit 5 [Verticillium
           albo-atrum VaMs.102]
          Length = 759

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 58/163 (35%), Gaps = 4/163 (2%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    +  +  +D A+   L    +  +    + PN   +  A+ + +  +R  +   
Sbjct: 519 VSGGWDKTARLWMQDHASAMRLLVGHNTSISALTWHPNGTYLFTASDETDKSIR--MWSV 576

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
                 +        I +   + NGK  L S      +  + ++  +       +     
Sbjct: 577 VTGGCVRVFTGHNEYISSLTCAPNGK-ILASGDTGGNIMFWDIEKGTRIKRSRGHAKGGI 635

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
            S  +S +S+ +V    ++G  +L+ ++      K I Q   A
Sbjct: 636 WSMDFSVESNVLV-SGGQDGTVRLWDVELPADGHKAIPQQGAA 677



 Score = 43.1 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 47/126 (37%), Gaps = 11/126 (8%)

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              I+         ++++  +  +G  +L+ +         I +  +       WSP G 
Sbjct: 466 NSAIDT-------GAKLLLSASADGHVRLWSLDL--WQCLCIYKGHDGPVMRVSWSPHGH 516

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
                 +      + +     +   L+  ++++ A TW P+G  L F+   + D   +++
Sbjct: 517 YFVSGGWDKTA-RLWMQDHASAMRLLVGHNTSISALTWHPNGTYL-FTASDETDKSIRMW 574

Query: 420 SIDLNG 425
           S+   G
Sbjct: 575 SVVTGG 580



 Score = 41.2 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 70/202 (34%), Gaps = 10/202 (4%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           V L    + +           ++   +S +G    +S   D+   ++  D  S    RL 
Sbjct: 485 VRLWSLDLWQCLCIYKGHDGPVMRVSWSPHGHY-FVSGGWDKTARLWMQDHAS--AMRLL 541

Query: 299 NTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                +ISA ++ P+ + + F +  E  + + +         R+             +P 
Sbjct: 542 VGHNTSISALTWHPNGTYL-FTASDETDKSIRMWSVVTGGCVRVFTGHNEYISSLTCAPN 600

Query: 358 GDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS 416
           G ++A +  +G       ++K    +R        + +  +S     L+ S  +DG    
Sbjct: 601 GKILA-SGDTGGNIMFWDIEKGTRIKRSRGHAKGGIWSMDFSVESNVLV-SGGQDGTV-- 656

Query: 417 KLYSIDLNGRNETLINTPAYAS 438
           +L+ ++L       I     A 
Sbjct: 657 RLWDVELPADGHKAIPQQGAAP 678


>gi|256111087|ref|ZP_05452139.1| WD-repeat family protein [Brucella melitensis bv. 3 str. Ether]
 gi|265992614|ref|ZP_06105171.1| WD-repeat family protein [Brucella melitensis bv. 3 str. Ether]
 gi|262763484|gb|EEZ09516.1| WD-repeat family protein [Brucella melitensis bv. 3 str. Ether]
          Length = 203

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 72/202 (35%), Gaps = 24/202 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P  Q++A A Y+        L+       P  +  ++   +   FS +G+  + S+Q
Sbjct: 9   AFAPKGQRLAIARYNG-----ATLIWAGTAAKPVEL-EWKGAHIGITFSPDGRFLITSMQ 62

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           ++ A+  +   L+ N   R+T         S+S  +  +       G     V    G D
Sbjct: 63  EN-ALHGWR--LEDNKHMRMTGYPAKVKDWSWSAKAKWLA----TSGAPAAIVWPFAGKD 115

Query: 338 ------QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                    +    ++        P G+ IA   ++     I +++    +E LL     
Sbjct: 116 GPMGKAPLELGLRGDSMVTSVACHP-GEDIAAIGYNDG--MILIVRFADQKEVLLRRPGK 172

Query: 392 --LQAPTWSPSGRSLIFSRKKD 411
             + +  W   G  L+F  +  
Sbjct: 173 GAITSMAWDEDGYRLVFGSQAG 194



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           +E S     ++P+G  +A  +++G      +     ++   L         T+SP GR L
Sbjct: 1   QERSVEGIAFAPKGQRLAIARYNGATL---IWAGTAAKPVELEWKGAHIGITFSPDGRFL 57

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVG 444
           I S +++   G +L     + ++  +   PA   D  W  
Sbjct: 58  ITSMQENALHGWRL----EDNKHMRMTGYPAKVKDWSWSA 93


>gi|154492011|ref|ZP_02031637.1| hypothetical protein PARMER_01642 [Parabacteroides merdae ATCC
           43184]
 gi|154088252|gb|EDN87297.1| hypothetical protein PARMER_01642 [Parabacteroides merdae ATCC
           43184]
          Length = 699

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 73/232 (31%), Gaps = 50/232 (21%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR--------------------- 257
           +SP+ +K+A     D    R+ L+++      + I  +R                     
Sbjct: 166 WSPDSRKLATVKVRDVQERRIPLIESSPSSQKQPILQWRDYAKPGDVLPVYLPVLFDVEA 225

Query: 258 ----SMILAP----------RFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNT- 300
               ++ + P           +  + +       +       I  V     +   L +  
Sbjct: 226 RKQMALNVTPYENQFYLNLTGWREDSRAFTFEFNQRGHQRYVIGEVSAADGSIRHLVDEQ 285

Query: 301 --LFINISASYS---PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
              FI    +Y     D  ++++ S+R+G   LY++       KR     E       + 
Sbjct: 286 TKTFIYYYNNYRYDLDDGKELLWISERDGWRHLYLIDGTSGQVKRQVTKGEWVLRQVDYV 345

Query: 356 PQGDLIAFTKFSG-----EKFAIG--VMKKDGSQERLLVEDSNLQAPTWSPS 400
            + + + +   SG     + + +    +  DG+    +  ++     T+S  
Sbjct: 346 DETNRVVYFTASGFNKGEDPYNLHYCRINLDGTGFTDMTPENGNHRVTFSAD 397


>gi|71400433|ref|XP_803051.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
 gi|70865621|gb|EAN81605.1| hypothetical protein, conserved [Trypanosoma cruzi]
          Length = 342

 Score = 44.6 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 25/173 (14%), Positives = 53/173 (30%), Gaps = 18/173 (10%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                + +    FSP+ + +A           + + D       + +    S +    ++
Sbjct: 178 LEGHSEAVLVVTFSPDGEALA----SGGGDKEIRIWDVYTLTPTEELKAHTSWVQVLSWA 233

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNAT--ERLTNTLFINISASYSP-----DSSQIVFE 319
            +GK  + S  KD  + I+S D        +R           S+ P     D ++ V  
Sbjct: 234 PDGKHLV-SGSKDGTIIIWSHDGMYGNFKGKRHKAHSSYLSHISWEPLHRNIDCNRFVSA 292

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           S    K+    +  N +  +      +A      W   G+   ++        
Sbjct: 293 S----KDTTLKVWHNVTGVQFSLSGHQACVTCVKW--GGEGFIYSSSQDRTRH 339



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 81/258 (31%), Gaps = 29/258 (11%)

Query: 114 GRVIKEGKDRLRVEFRLWD---VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           G V +  +    V  RL D   V    Q++     ++P           D++  S+  E 
Sbjct: 46  GAVDEIEEKDKNVMVRLVDEKGVLTGAQLL-LPVTATPKQL--------DELLCSMLDES 96

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY-- 228
                   F+    V   +++SL    ++    + +   R           +  K+ +  
Sbjct: 97  ARGTPYAFFIDGDQVHDSVRDSLFRRQQEAFVDKMMKEGRRFRQQ------DVSKLEFEL 150

Query: 229 ---ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
                 D +   +   M   + R    +      +L   FS +G+            +I 
Sbjct: 151 PEETVVDIQFKPQAKFMVRPVTRCTGALEGHSEAVLVVTFSPDGEALA---SGGGDKEIR 207

Query: 286 SVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             D+ +   TE L          S++PD   +V  S ++G   ++       + K     
Sbjct: 208 IWDVYTLTPTEELKAHTSWVQVLSWAPDGKHLVSGS-KDGTIIIWSHDGMYGNFKGKRHK 266

Query: 345 KEASYFDP-VWSPQGDLI 361
             +SY     W P    I
Sbjct: 267 AHSSYLSHISWEPLHRNI 284



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 39/95 (41%), Gaps = 7/95 (7%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
           +SP G+ +A +    ++  I  +      E L    S +Q  +W+P G+ L+ S  KDG 
Sbjct: 190 FSPDGEALA-SGGGDKEIRIWDVYTLTPTEELKAHTSWVQVLSWAPDGKHLV-SGSKDGT 247

Query: 414 TGSKLYSIDLNGRN---ETLINTPAYASDPQWVGF 445
               ++S D    N   +      +Y S   W   
Sbjct: 248 II--IWSHDGMYGNFKGKRHKAHSSYLSHISWEPL 280


>gi|326927752|ref|XP_003210054.1| PREDICTED: acylamino-acid-releasing enzyme-like [Meleagris
           gallopavo]
          Length = 1266

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/248 (12%), Positives = 78/248 (31%), Gaps = 49/248 (19%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMD--TRIDRAPKRIGNFRSMILAPRFSSNGKRALI- 274
            +S ++  + Y           +       +D +            AP     G++ +  
Sbjct: 180 AWSHSETHLLYVAEKKRPKAESFFQTKAPELDGSADEELECPKKTDAP---IKGEQFVYY 236

Query: 275 -----SVQKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFES-----D 321
                ++       +  +D++ ++   L   +  ++S     +SPD + +VF        
Sbjct: 237 EDWGETLSTRSVPVLCVLDIEGSSISVL-EGVPKHVSPGQAFWSPDDTGVVFVGWWHEPF 295

Query: 322 REG-------KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT-------KFS 367
           R G       +  L+ +   G   + +S+D   + + P  SP    IA+           
Sbjct: 296 RLGLRHCTNRRSALFYVDLTGGKCELLSEDT-GALWSPRLSPDCCHIAYLENRVLGPHQQ 354

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQ--AP----------TWSPSGRSLIFSRKKDGDTG 415
             +  +        Q  +L  ++ +    P           W+   R L+    +   + 
Sbjct: 355 CSRLLLWSRSWGTGQGEVLSTNTLITGAFPGIYCTTLPRLCWAADSRRLVLDTSQ--RSQ 412

Query: 416 SKLYSIDL 423
             ++ +D 
Sbjct: 413 QDVFVVDT 420



 Score = 40.8 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 17/146 (11%), Positives = 36/146 (24%), Gaps = 29/146 (19%)

Query: 265 FSSNGKRALISVQ------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           +S +    +                 +    ++ VDL     E L+       S   SPD
Sbjct: 278 WSPDDTGVVFVGWWHEPFRLGLRHCTNRRSALFYVDLTGGKCELLSEDTGALWSPRLSPD 337

Query: 313 SSQIVFESDREGKEQ-------LYVMQSNGSDQKRISQDKEASYFDP----------VWS 355
              I +  +R            L+         + +S +   +   P           W+
Sbjct: 338 CCHIAYLENRVLGPHQQCSRLLLWSRSWGTGQGEVLSTNTLITGAFPGIYCTTLPRLCWA 397

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGS 381
                +        +  + V+     
Sbjct: 398 ADSRRLVLDTSQRSQQDVFVVDTQTG 423



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 17/121 (14%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD----DEDILRVYLMD 243
             +++L  +D  G     L+      L+ PR SP+   +AY         +   R+ L  
Sbjct: 304 NRRSALFYVDLTGGKCELLSEDT-GALWSPRLSPDCCHIAYLENRVLGPHQQCSRLLLWS 362

Query: 244 TRIDRAPKRI--------GNFRSM--ILAPR--FSSNGKRALISVQKDEAMDIYSVDLQS 291
                    +        G F  +     PR  ++++ +R ++   +    D++ VD Q+
Sbjct: 363 RSWGTGQGEVLSTNTLITGAFPGIYCTTLPRLCWAADSRRLVLDTSQRSQQDVFVVDTQT 422

Query: 292 N 292
            
Sbjct: 423 G 423


>gi|303321171|ref|XP_003070580.1| WD domain, G-beta repeat containing protein [Coccidioides posadasii
            C735 delta SOWgp]
 gi|240110276|gb|EER28435.1| WD domain, G-beta repeat containing protein [Coccidioides posadasii
            C735 delta SOWgp]
          Length = 1109

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 71/222 (31%), Gaps = 35/222 (15%)

Query: 110  VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK-----------IAHTI 158
             ++ GRV ++            D+   +     +   S    R              H  
Sbjct: 821  AVMDGRVTRDPNGITNH----IDIIKHRTSNSPRTVISSNDDRIRILDCETNRFVSMHKF 876

Query: 159  SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            +  I    T    D   R++                ++D +               F   
Sbjct: 877  ARAIN--CTDTSPDGRLRVII--------GDAPDAWIIDSETGKPVQTLIGHRDYGFACA 926

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG---KRALIS 275
            +SP+   +A +  D      V + D R+ R  + I +  +   + RFS  G   +  L+ 
Sbjct: 927  WSPDMLHIATSNQDK----TVNIWDARMWRTLQVIDSDVAGYRSLRFSPVGGGPRTLLMC 982

Query: 276  VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
               + A  I  V+ Q+  T ++ +       A YSPD S+I 
Sbjct: 983  ---EPADRIAIVNAQTYQTRQVHDFFGEIGGADYSPDGSRIW 1021



 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 66/198 (33%), Gaps = 30/198 (15%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+ +          D    +++D+   +  + +   R    A  +S +      +  +D
Sbjct: 886  SPDGR----LRVIIGDAPDAWIIDSETGKPVQTLIGHRDYGFACAWSPDMLHIA-TSNQD 940

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + ++I+   +     + + + +    S  +SP           E  +++ ++ +     +
Sbjct: 941  KTVNIWDARM-WRTLQVIDSDVAGYRSLRFSPVGGGPRTLLMCEPADRIAIVNAQTYQTR 999

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFS--------------GEKFAIGVMKKDGSQERL 385
            ++  D         +SP G  I                    G++F IG      ++ R 
Sbjct: 1000 QV-HDFFGEIGGADYSPDGSRIWVANMDTKFGGFMEFDRREWGQEFGIGH-----TRRRR 1053

Query: 386  LVEDSNLQAPT----WSP 399
            +    +  +P     W P
Sbjct: 1054 IEAQGDFYSPDLPNEWLP 1071


>gi|238493978|ref|XP_002378225.1| transcriptional repressor TupA/RocA, putative [Aspergillus flavus
           NRRL3357]
 gi|317148795|ref|XP_001822916.2| transcriptional repressor rco-1 [Aspergillus oryzae RIB40]
 gi|220694875|gb|EED51218.1| transcriptional repressor TupA/RocA, putative [Aspergillus flavus
           NRRL3357]
          Length = 586

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 49/155 (31%), Gaps = 12/155 (7%)

Query: 256 FRSMILAPRFSSNGKRALISVQK-----DEAMDIYSVDLQSNATERLTNTLFINISASYS 310
             S++   RFS +GK       +     D         LQ    ++  N      S  +S
Sbjct: 279 HDSVVCCVRFSRDGKYLATGCNRSAQIFDVTTGQNVATLQDENVDK--NGDLYIRSVCFS 336

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD     F +     +Q+ V        K I    E   +   ++  G  IA +    + 
Sbjct: 337 PDGK---FLATGAEDKQIRVWDIAARTIKHIFTGHEQDIYSLDFAGNGRYIA-SGSGDKT 392

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             +  +  DG     L  +  +     SP G  + 
Sbjct: 393 VRLWDI-LDGKLVYTLSIEDGVTTVAMSPDGHYVA 426


>gi|163858383|ref|YP_001632681.1| nitrite reductase precursor / cytochrome cd1 [Bordetella petrii DSM
           12804]
 gi|163262111|emb|CAP44413.1| Nitrite reductase precursor / Cytochrome cd1 [Bordetella petrii]
          Length = 494

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 69/193 (35%), Gaps = 16/193 (8%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           ++D D        PS   +   P+FSP+ + V +A+ D   I +  L +  +    +   
Sbjct: 147 ILDGDQFEPLARFPSHFALHGGPKFSPDGRYVYFASRD-GWISKYDLHNLTMVAEIRAGL 205

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEA---MDIYSVDLQSNATERLTNTLFINISASYSP 311
           N R++      S +G+  L+          +D   + L  +    L + +   +SA Y+ 
Sbjct: 206 NTRNL----AVSGDGRWVLVGNYLPGGLVLLDARDLSLVGSIATPLADGMPSRVSAVYTA 261

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
              +  F    +  ++++ +   G      +RI        F   ++P    +  T    
Sbjct: 262 -PRRQSFVVALKDVQEVWELSYAGQPDFIPRRIPARDFLDDF--SFTPDHRYLLATSRKA 318

Query: 369 EKFAIGVMKKDGS 381
                 V+  D  
Sbjct: 319 HGGQ--VIDLDSG 329



 Score = 39.6 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 48/154 (31%), Gaps = 12/154 (7%)

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
             +  +L N   +  +  +  D   + F     G   + ++  +  +         A + 
Sbjct: 109 GASHRQLANPGTLPDTPQHGADPLNL-FVVVEAGNHHVVILDGDQFEPLARFPSHFALHG 167

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            P +SP G  + F    G      +     +    +    N +    S  GR ++     
Sbjct: 168 GPKFSPDGRYVYFASRDGWISKYDLHNL--TMVAEIRAGLNTRNLAVSGDGRWVLVGNYL 225

Query: 411 DGDTGSKLYSIDLNGRNETL---INTPAYASDPQ 441
            G        + L+ R+ +L   I TP     P 
Sbjct: 226 PGG------LVLLDARDLSLVGSIATPLADGMPS 253



 Score = 37.3 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 34/243 (13%), Positives = 76/243 (31%), Gaps = 12/243 (4%)

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           D D         +   +   P+   +   +            V ++D        R  + 
Sbjct: 105 DADIGASHRQLANPGTLPDTPQHGADPLNLFVVVEAGNH--HVVILDGDQFEPLARFPSH 162

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
            ++   P+FS +G+    +  +D    I   DL +              + + S D   +
Sbjct: 163 FALHGGPKFSPDGRYVYFA-SRDG--WISKYDLHNLTMVAEIRAGLNTRNLAVSGDGRWV 219

Query: 317 VFESDREGKEQL---YVMQSNGSDQKRISQDKEASYFDPVWSPQGD-LIAFTKFSGEKFA 372
           +  +   G   L     +   GS    ++    +       +P+    +   K   E + 
Sbjct: 220 LVGNYLPGGLVLLDARDLSLVGSIATPLADGMPSRVSAVYTAPRRQSFVVALKDVQEVWE 279

Query: 373 IGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
           +    +     R +     L   +++P  R L+ + +K    G ++  +D +G     I 
Sbjct: 280 LSYAGQPDFIPRRIPARDFLDDFSFTPDHRYLLATSRKA--HGGQVIDLD-SGATIRDIA 336

Query: 433 TPA 435
            P 
Sbjct: 337 LPG 339


>gi|145239265|ref|XP_001392279.1| protein HIR1 [Aspergillus niger CBS 513.88]
 gi|134076785|emb|CAK39840.1| unnamed protein product [Aspergillus niger]
          Length = 1060

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 45/241 (18%), Positives = 73/241 (30%), Gaps = 48/241 (19%)

Query: 220 SPNQQKVAYATYDDEDILRVY-------LMDTRIDRAPKRI---GNFRSMILAPRFSSNG 269
           SP+  ++  A  D    +R++         D      PK++    N    I   RFS NG
Sbjct: 26  SPDGSRLVTAAGD--GYVRIWSTEAICNTDDPENASKPKQLASMSNHSGTIHTVRFSPNG 83

Query: 270 KRALISVQKDEAMDIYSVDLQ------------------SNATERLTNTLFINISASYSP 311
           K    S   D+ + IY++D                         RL           +S 
Sbjct: 84  KYLA-SGADDKIVCIYTLDANPPSHASTFGSNEAPPVENWRTIRRLIGHDNDVQDLGWSY 142

Query: 312 DSS--------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
           DSS          V        E+L  +  + S  K ++ D    YF    S    +  F
Sbjct: 143 DSSILVSVGLDSKVVVWSGTTFEKLKTLSIHQSHVKGVTFDPANKYFATA-SDDRTVRIF 201

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP--------TWSPSGRSLIFSRKKDGDTG 415
              S    +    + +       +      +P        +WSP G  +  +   +G   
Sbjct: 202 RFTSPAPNSSAHDQMNNFILEQTISAPFSNSPLTAYFRRCSWSPDGMHIAAANAVNGPVS 261

Query: 416 S 416
           S
Sbjct: 262 S 262



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 33/227 (14%), Positives = 77/227 (33%), Gaps = 36/227 (15%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD-----------------TRIDRA 249
             +    +   RFSPN + +A  +  D+ I+ +Y +D                     R 
Sbjct: 67  MSNHSGTIHTVRFSPNGKYLA--SGADDKIVCIYTLDANPPSHASTFGSNEAPPVENWRT 124

Query: 250 PKRIGNFRSMILAPRFSSNGKRA--------LISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +R+    + +    +S +            ++         + ++ +  +  + +T   
Sbjct: 125 IRRLIGHDNDVQDLGWSYDSSILVSVGLDSKVVVWSGTTFEKLKTLSIHQSHVKGVTFDP 184

Query: 302 FINISASYSPDSSQIV--FES---DREGKEQLYVMQSNGSDQKRISQDKEASYF-DPVWS 355
                A+ S D +  +  F S   +    +Q+       +     S     +YF    WS
Sbjct: 185 ANKYFATASDDRTVRIFRFTSPAPNSSAHDQMNNFILEQTISAPFSNSPLTAYFRRCSWS 244

Query: 356 PQGDLIAFTK-FSGEKFAIGVMKKDG--SQERLLVEDSNLQAPTWSP 399
           P G  IA     +G   ++ ++ +        L+  ++ ++   +SP
Sbjct: 245 PDGMHIAAANAVNGPVSSVAIINRGSWDGDINLIGHEAPVEVCAFSP 291


>gi|119473387|ref|XP_001258593.1| hypothetical protein NFIA_060520 [Neosartorya fischeri NRRL 181]
 gi|119406745|gb|EAW16696.1| conserved hypothetical protein [Neosartorya fischeri NRRL 181]
          Length = 621

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 16/154 (10%)

Query: 265 FSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           FS +G   L      E   +D+++V L + A  RLT+        ++S D+   V    R
Sbjct: 278 FSGSGDEILYIGSPREANNIDVFAVHLVTGAVRRLTSHPEYTDPVAFSQDNKWFVAMDTR 337

Query: 323 EGKEQLY----VMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVM 376
               Q++     M     D   ++         P   + P    I   ++       G  
Sbjct: 338 GSDRQMWMSGMRMVPPLIDLVTVTAASSTRNNGPRRFFQP----ILIDRYGDRGDYFGQQ 393

Query: 377 -KKDGSQERLLVEDSNLQA---PTWSPSGRSLIF 406
              +G      + D N      P +SP    ++F
Sbjct: 394 VNAEGDGSNGSINDPNWNGRADPAFSPDTTLIVF 427


>gi|169598762|ref|XP_001792804.1| hypothetical protein SNOG_02189 [Phaeosphaeria nodorum SN15]
 gi|111069281|gb|EAT90401.1| hypothetical protein SNOG_02189 [Phaeosphaeria nodorum SN15]
          Length = 641

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 35/203 (17%), Positives = 67/203 (33%), Gaps = 27/203 (13%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISASY------SPDSS 314
           ++  G        +     +  V + +    R     T+  FI+ +         S +SS
Sbjct: 190 WNKEGTEYRFLYNERGHKALRIVAMNTRGDVRAIAEDTSDTFIDYAHKLYYQELTSSNSS 249

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---- 370
           ++++ S+R+G   LY++       K      E       +  +     + K  G      
Sbjct: 250 ELIWASERDGWNHLYLIDMKTGKVKNQITKGEWLVRSVDYVDEAKRQIWIKVFGAVPGQD 309

Query: 371 ---FAIGVMKKDGSQERLLVEDSNLQAPTWSPS--------GR--SLIFSRKKDGDTGSK 417
                +  +  DGS  ++L E     + T+S           R      + ++D +TG K
Sbjct: 310 PYYAHLARVNFDGSDFKILTEGDGSHSWTFSEDRTTFTDTWSRMDMAAITVRRDAETGEK 369

Query: 418 LYSIDLNGRNETLINTPAYASDP 440
              I     N  L   P   + P
Sbjct: 370 TADISAGNLNFLLWPIPERFAAP 392


>gi|17231080|ref|NP_487628.1| hypothetical protein alr3588 [Nostoc sp. PCC 7120]
 gi|17132721|dbj|BAB75287.1| alr3588 [Nostoc sp. PCC 7120]
          Length = 908

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 49/273 (17%), Positives = 90/273 (32%), Gaps = 35/273 (12%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFE----PRFSPNQ-----QKVAYATYDDEDILRVYL 241
           N+L     DG N   L  S   I         F+P        ++ +A  +D     ++ 
Sbjct: 523 NTLYFTANDGINGVQLWSSNGDITTRLSNISSFNPTNLIVFNNRLYFAASNDTFGRELWE 582

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-VQKDEAMDIYSVDLQSNATERLTNT 300
            +         I            +  G +   + V  D    ++  +         TN 
Sbjct: 583 YNGTTVNRISDINVGAGNSNPGNLTVAGNKLFFTAVDNDSIRKLWVYNG--------TNV 634

Query: 301 LFINISASYSPDSS---------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFD 351
             ++++AS+S  S+         Q+ F +  +   QL+         + IS         
Sbjct: 635 NLVDVNASFSNSSTPTFTTTFNNQLFFTA--QNNSQLWSTDGTIGGTQVISAGGITKSTP 692

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS-----GRSLIF 406
              +  G+ + FT  +G         ++G+   LL ED      +++PS     G +L F
Sbjct: 693 RNLTVVGNTLYFTANNGTSGHEIWQYQNGTTASLL-EDITPGNNSFAPSSLTAVGNTLYF 751

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
               D D   +L+  D       +I T   A +
Sbjct: 752 VTDSDNDFNLELWKSDGTAAGTDIIGTDGQAPN 784


>gi|332877757|ref|ZP_08445498.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684337|gb|EGJ57193.1| OmpA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 660

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 63/202 (31%), Gaps = 61/202 (30%)

Query: 269 GKRALISVQKDEAMD------------IYSVDLQSNATERLTNTLFINI-----SASYSP 311
           G   + +  K   +             +Y  +  S    R      IN      +A+++ 
Sbjct: 174 GDNIVYATSKTGFLKRRSEWTGDNFYTLYEANTDSLQASRKAKLNGINTKFNESTAAFTK 233

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRI-----SQDKEASYFDPVWSPQGDLIAFTKF 366
           D + + F  +     +   +++NG     +     ++DK   + +    P    I     
Sbjct: 234 DGNTMYFTRNNFINNE---VKTNGDQTVLLKIFKATKDKSGKWGNVQEMPFNSNI----- 285

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLY----SI 421
                                   ++  P  SP G+ + ++    G  G S +Y      
Sbjct: 286 -----------------------HSVAHPALSPDGKYIYYTSDMKGTIGASDIYRSKILK 322

Query: 422 DLNGRNETL---INTPAYASDP 440
           D  G+ E L   INTP   S P
Sbjct: 323 DGYGKPENLGERINTPGRESFP 344


>gi|325953685|ref|YP_004237345.1| NHL repeat containing protein [Weeksella virosa DSM 16922]
 gi|323436303|gb|ADX66767.1| NHL repeat containing protein [Weeksella virosa DSM 16922]
          Length = 353

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 38/238 (15%), Positives = 89/238 (37%), Gaps = 16/238 (6%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+    N++ +M+ DG +I+ +               NQ ++      +  + R+ +  +
Sbjct: 88  VADYNGNAVKLMNADGTDIQTIGSGFYNPYSVTV--DNQNRLLITDNFNTQVKRMNIDGS 145

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
            I     +  + R   +     ++GK  +         +I  ++   +  E++ +     
Sbjct: 146 NIQILQDQFFSPRKTAIE----NDGKILVC---NTGNSEIIRMNEDGSNLEKIGHGFSYP 198

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
            S +  PD   +V ++      Q+  M ++GS+ + ++ D             GD I   
Sbjct: 199 YSIAIQPDGKIVVADTF---NRQVKRMNADGSNIEILANDLNYP-SSVAIEANGD-ILVV 253

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           +F  +     VM   G+ E  + +      P   P+   +I   K + +    +Y++D
Sbjct: 254 EFGSQLIKRIVMSSMGTSENPIEKIETKIYPN--PAKNFVIVDAKNEKNATLSIYTLD 309


>gi|255560888|ref|XP_002521457.1| COMPASS component SWD2, putative [Ricinus communis]
 gi|223539356|gb|EEF40947.1| COMPASS component SWD2, putative [Ricinus communis]
          Length = 338

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 56/147 (38%), Gaps = 11/147 (7%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA--PKRIGNFRSMILAPRFSSNGKRAL 273
            P  + +QQ + +A   +   ++++   +          +G   + +   +FS++GK  L
Sbjct: 157 RPTVAYDQQGLVFAVAMEGGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSML 216

Query: 274 ISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           ++   +   +IY +D           L  +    I A+++PD   +V  S   G   L+ 
Sbjct: 217 LTTTSN---NIYVLDAYGGEKRCGFSLEPSPNTTIEATFTPDGQYVVSGS---GDGTLHA 270

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQ 357
              N  ++               W+P+
Sbjct: 271 WNINMRNEVASWNSHIGVASCFKWAPR 297



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 17/130 (13%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIA 362
            + + D   +VF    EG   + +  S   D+              V    +S  G  + 
Sbjct: 158 PTVAYDQQGLVFAVAMEGG-AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSML 216

Query: 363 FTKFSGEKFAIGVMKKDGSQER----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            T  S     I V+   G ++R    L    +     T++P G+ ++      G     L
Sbjct: 217 LTTTSN---NIYVLDAYGGEKRCGFSLEPSPNTTIEATFTPDGQYVV-----SGSGDGTL 268

Query: 419 YSIDLNGRNE 428
           ++ ++N RNE
Sbjct: 269 HAWNINMRNE 278


>gi|189055067|dbj|BAG38051.1| unnamed protein product [Homo sapiens]
          Length = 364

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 22/169 (13%), Positives = 51/169 (30%), Gaps = 12/169 (7%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
            +   +      R    +  +    FS +G     S  +D+ + I+  +++   +     
Sbjct: 1   MVWHMKPQSRAYRFTGHKDAVTCVNFSPSGHLLA-SGSRDKTVRIWVPNVK-GESTVFRA 58

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQG 358
                 S  +  D    V  SD    ++   + +    +   S  +  ++     +SP G
Sbjct: 59  HTATVRSVHFCSDGQSFVTASD----DKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDG 114

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLI 405
            LI           + +  K   +           +    + PSG  + 
Sbjct: 115 RLIVSASDDKT---VKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTCIA 160



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 67/225 (29%), Gaps = 21/225 (9%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +   +      +  +    +    F  + Q    A+ D      V +  T 
Sbjct: 35  SGSRDKTVRIWVPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDK----TVKVWATH 90

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFIN 304
             +    +    + +   +FS +G R ++S   D+ + ++  D  S              
Sbjct: 91  RQKFLFSLSQHINWVRCAKFSPDG-RLIVSASDDKTVKLW--DKSSRECVHSYCEHGGFV 147

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
               + P  + I           + V         +  Q   A+     + P G+ +   
Sbjct: 148 TYVDFHPSGTCIAAAGM---DNTVKVWDVRTHRLLQHYQLHSAAVNGLSFHPSGNYLITA 204

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                   + +M     + RLL      Q P       ++ FSR 
Sbjct: 205 SSDSTLKILDLM-----EGRLLYTLHGHQGPA-----TTVAFSRT 239


>gi|166714158|ref|ZP_02245365.1| dipeptidyl anminopeptidase [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 694

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 50/137 (36%), Gaps = 10/137 (7%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAFTKF 366
           S SPD   + + +  EG   ++V   +  DQ R I++D      +  W+ Q + + + + 
Sbjct: 60  SISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPNTLLYLRD 119

Query: 367 SGE--KFAIGVMKKDGSQERLLVEDSNLQAPTW-----SPSGRSLIFSRKKDGDTGSKLY 419
           +G    F +  +       + L   +   A  +      P   S++            LY
Sbjct: 120 NGGDEDFHLFSVNLTDGSSKDLTPFTKTNALVYRVSAQHP--ESIMVGMNDRDAKWHDLY 177

Query: 420 SIDLNGRNETLINTPAY 436
            +DL     TL+     
Sbjct: 178 RVDLASGTRTLVQKNTE 194



 Score = 43.5 bits (101), Expect = 0.071,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 59/169 (34%), Gaps = 13/169 (7%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLF---INISASYSPDSSQIVFE 319
             S +GK        +  ++++   + + +    +T        N   +Y P+   +++ 
Sbjct: 60  SISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQPN--TLLYL 117

Query: 320 SDREGKE--QLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIAFTKFSGEKFAIG 374
            D  G E   L+ +       K ++   + +      S   P+  ++       +   + 
Sbjct: 118 RDNGGDEDFHLFSVNLTDGSSKDLTPFTKTNALVYRVSAQHPESIMVGMNDRDAKWHDLY 177

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRS-LIFSRKKDGDTGSKLYSID 422
            +    S  R LV+ +  +   +   G   L ++ +   D G +L   D
Sbjct: 178 RVDLA-SGTRTLVQKNTERLDAYLLDGDYQLRYATRATDDAGRELLVPD 225



 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 8/94 (8%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDS----NLQAPTWSP 399
                 +   SP G  +++         + V   D   Q R + +D+         T+ P
Sbjct: 52  GNPERANVSISPDGKYLSWVAPLEGVLNVWVAPVDAPDQARAITKDTARGIRNYFWTYQP 111

Query: 400 SGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLIN 432
           +  +L++ R   GD    L+S++L +G ++ L  
Sbjct: 112 N--TLLYLRDNGGDEDFHLFSVNLTDGSSKDLTP 143


>gi|156545667|ref|XP_001604198.1| PREDICTED: similar to wd-repeat protein [Nasonia vitripennis]
          Length = 628

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 39/290 (13%), Positives = 82/290 (28%), Gaps = 30/290 (10%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIK----------------NSLCV 195
           R++   IS  IY + +      +  I         G                   NS+ +
Sbjct: 9   RRLLFYISRAIYPTPSPSSQAQHQYIFATLPRTQRGQPLVLGGDPKGKNFLYTNGNSVII 68

Query: 196 MDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
            + D   I  +       +   ++SP+   +A  + D    +R++    +          
Sbjct: 69  RNIDNPAISDIYTEHSCPVNVAKYSPSGFYIA--SGDQSGKVRIWDTVNKEHILKNEFHP 126

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
               I    +S + +R ++  +  E      +     +   ++       S  + P    
Sbjct: 127 IGGPIKDIAWSPDNQRMVVVGEGRERFGHVFMSETGTSVGEISGQSKPINSCDFRPSRPF 186

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            +     +    + V +                     +SP G L A   F G    + +
Sbjct: 187 RLITGSED--NTIAVFEGPPXXXXXXXXXXXXXXQAVRYSPTGHLFASAGFDG---KVYL 241

Query: 376 MKKDGSQER----LLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                S+             +    W P G  L+ +    GD   KL+ +
Sbjct: 242 YDGTSSELVGEVGSPAHQGGVYGVAWKPDGTQLLTAS---GDKTCKLWDV 288


>gi|156120341|ref|NP_001095316.1| echinoderm microtubule-associated protein-like 3 [Bos taurus]
 gi|151554937|gb|AAI47906.1| EML3 protein [Bos taurus]
 gi|296471635|gb|DAA13750.1| echinoderm microtubule associated protein like 3 [Bos taurus]
          Length = 892

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 48/150 (32%), Gaps = 12/150 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              LC+ D +G  + +    ++  L    F P+   VA       +  R  ++DT     
Sbjct: 614 DRQLCLWDGEGHALAWSIDLKETGLCA-DFHPSGAVVAVGL----NTGRWLVLDTETREI 668

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINIS 306
              I +    +   R+S +G    I    D  + IYSV      + R             
Sbjct: 669 VSDITDGNEQLSVVRYSPDGLYLAI-GSHDNMIYIYSVSSDGAKSSRFGRCVGHSSFITH 727

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +S D +   F     G  ++      G 
Sbjct: 728 LDWSKDGN---FIMSNSGDYEILYWDVAGG 754


>gi|15242311|ref|NP_196473.1| transducin family protein / WD-40 repeat family protein
           [Arabidopsis thaliana]
 gi|145334329|ref|NP_001078546.1| transducin family protein / WD-40 repeat family protein
           [Arabidopsis thaliana]
 gi|9759350|dbj|BAB10005.1| WD-repeat protein-like [Arabidopsis thaliana]
 gi|15450910|gb|AAK96726.1| WD-repeat protein-like [Arabidopsis thaliana]
 gi|17978717|gb|AAL47352.1| WD-repeat protein-like [Arabidopsis thaliana]
 gi|332003937|gb|AED91320.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
 gi|332003938|gb|AED91321.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
          Length = 589

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 53/168 (31%), Gaps = 21/168 (12%)

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFIN 304
            +  + + +    +   +FS NGK    S  KD+   I+ +      +    L       
Sbjct: 264 SQTAQILESHTDEVWFLQFSHNGKYLA-SSSKDQTAIIWEISADGHISLKHTLVGHHKPV 322

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           I+  +SPD  Q++       +E +     +  D   + +    S     W P G  I   
Sbjct: 323 IAILWSPDDRQVLTC---GAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGIIAG 379

Query: 365 KFSGEKFAIGVMKKDG-------SQERLLVEDSNLQAPTWSPSGRSLI 405
                   I +   DG        Q    V D  +        G+ L+
Sbjct: 380 MTDRS---ICMWDLDGREKECWKGQRTQKVSDIAMTD-----DGKWLV 419



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 64/192 (33%), Gaps = 13/192 (6%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G+   S+C+ D DG         R Q + +   + + + +     D      + L D  
Sbjct: 378 AGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDS----VISLFDRE 433

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT---NTLF 302
                +R+     MI +   S++ K  L+++  ++ + +++++       R      + F
Sbjct: 434 AT--VERLIEEEDMITSFSLSNDNKYILVNL-LNQEIRLWNIEGDPKIVSRYKGHKRSRF 490

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           I  S        +  F +      Q+Y+   +             +     WSP    + 
Sbjct: 491 IIRSCF---GGYKQAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHML 547

Query: 363 FTKFSGEKFAIG 374
            +        I 
Sbjct: 548 ASASDDGTIRIW 559


>gi|329119227|ref|ZP_08247914.1| hypothetical protein HMPREF9123_1343 [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327464574|gb|EGF10872.1| hypothetical protein HMPREF9123_1343 [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 382

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 52/150 (34%), Gaps = 14/150 (9%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + V  A       ++    D   +     + +    I      + GKR  +S+    
Sbjct: 75  PDGRLVYGAVLQQGGAVQRKNPDAPDEAEGLLLRHADCTIHDMACDAEGKRLALSLSGSG 134

Query: 281 A--MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF-------ESDRE---GKEQL 328
               +I  + L +N    +T     + + ++ PD+S I++        ++R    G   +
Sbjct: 135 WGERNIALMPLDANRFRFITEGECRDSNPAFDPDNSDILYYDSCGLAHTERGLVFGPRAV 194

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
             +         +  D +  YF P   P G
Sbjct: 195 NRLNLAEGTLDTVLSDDKHDYFQPR--PDG 222


>gi|319952235|ref|YP_004163502.1| dipeptidyl anminopeptidase [Cellulophaga algicola DSM 14237]
 gi|319420895|gb|ADV48004.1| putative dipeptidyl anminopeptidase [Cellulophaga algicola DSM
           14237]
          Length = 753

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 72/193 (37%), Gaps = 19/193 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++PN + ++Y   DD+    VY+ +    +  + I     +I    +  N  R +  + 
Sbjct: 156 NYAPNGKYISYMEKDDDGKRHVYVKEIATGKITRAIEEKEELIRGYGW-VNNNRLVYLMD 214

Query: 278 KDE--AMDIYSVDLQSNATERLTNTLFINISASY----SPDSSQIVFESDREGKEQL--- 328
           +       +Y+ DL     + LT   F  + A++      D   I+  S  +   Q+   
Sbjct: 215 QGGDENFHLYAADLDGANQKDLT--PFEGVKANFLELLKEDKDHII-ISLNKNNPQIFDP 271

Query: 329 YVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDLIAFTKFSGE-KFAIGVMKKDGSQERL 385
           Y +       +++  +++         +   G+L AFTK     +  +      G  E +
Sbjct: 272 YKVNIVTGALEQLYTNEDVANPIMGYNFDKDGNLKAFTKLRDGVEQDLYYANAAGKFEIV 331

Query: 386 LVEDSNLQAPTWS 398
              +S     ++S
Sbjct: 332 ---NSLNWKDSFS 341



 Score = 40.4 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 4/79 (5%)

Query: 354 WSPQGDLIAFT-KFSGEKFAIGVMKKDGSQERLLVEDS--NLQAPTWSPSGRSLIFSRKK 410
           ++P G  I++  K    K  + V +    +    +E+    ++   W  +   L++   +
Sbjct: 157 YAPNGKYISYMEKDDDGKRHVYVKEIATGKITRAIEEKEELIRGYGW-VNNNRLVYLMDQ 215

Query: 411 DGDTGSKLYSIDLNGRNET 429
            GD    LY+ DL+G N+ 
Sbjct: 216 GGDENFHLYAADLDGANQK 234


>gi|307195211|gb|EFN77195.1| Transcription initiation factor TFIID subunit 5 [Harpegnathos
           saltator]
          Length = 652

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 28/182 (15%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D + V +MD R     + +      + +  FS + +  L+S  +D  + ++S+       
Sbjct: 374 DDVLVRMMDERTSETARNLYGHSGPVYSLSFSPD-RNLLLSSSEDATIRLWSLHT----- 427

Query: 295 ERLTN------TLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDK 345
              T        LF      +SP      F S   DR  +    +  ++     RI    
Sbjct: 428 --WTCVVCYKGHLFPVWCVRFSPHG--YYFTSASYDRTAR----LWATDSHQPLRIFAGH 479

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLV-EDSNLQAPTWSPSGRS 403
            +      + P  + +A          + +     GSQ RL+      + +  +S  GR 
Sbjct: 480 YSDVNVVQFHPNSNYVA---TGSSDMTVRLWDCVTGSQVRLMTGHKGPIYSLAFSTEGRF 536

Query: 404 LI 405
           L 
Sbjct: 537 LA 538



 Score = 40.4 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 53/146 (36%), Gaps = 9/146 (6%)

Query: 144 FFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV----SESVVSGIIKNSLCVMDRD 199
           ++ + AS+ + A   + D +Q +    G ++   +      S  V +G    ++ + D  
Sbjct: 451 YYFTSASYDRTARLWATDSHQPLRIFAGHYSDVNVVQFHPNSNYVATGSSDMTVRLWDCV 510

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
             +   L       ++   FS   + +A A  D     RV + D         +      
Sbjct: 511 TGSQVRLMTGHKGPIYSLAFSTEGRFLASAGTDH----RVLVWDLAHGHLVAALSGHTGN 566

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIY 285
           I    FS +G   L+S   D  + ++
Sbjct: 567 IECLSFSRDGN-ILVSGSLDYTVRLW 591


>gi|269964480|ref|ZP_06178721.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269830818|gb|EEZ85036.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 383

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 79/220 (35%), Gaps = 25/220 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             +   ++   R S N +    A+      +   + D    ++        ++I     +
Sbjct: 130 LDADANVVSHIRISDNGRYAITASQ-----MNFAVWDLGWTQSEGLWSISDALIRDVDIT 184

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           SNG++ L+ +   +A+ +  V       E L +   +N S + SP+     F        
Sbjct: 185 SNGEQVLLGLSNGKAIYVNLV--TGRRMEFLAHREKVN-SVAISPNGR---FALTGGNDY 238

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           + Y+  +      R + + E           G  +A T   G   AI    K G +   L
Sbjct: 239 KAYLWDTETGQVLR-TFEHEQRIVRVALQRDGK-LAMTS-DGGNQAIVWNLKTGQEVTQL 295

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                    +WS   R LIFS  +  D G++L +   +GR
Sbjct: 296 S--------SWS---RQLIFSTARFSDDGTQLVTGSPSGR 324



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 9/129 (6%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            R  + +   S NG+    ++        Y  D ++    R        +  +   D  +
Sbjct: 215 HREKVNSVAISPNGR---FALTGGNDYKAYLWDTETGQVLRTFEHEQRIVRVALQRDG-K 270

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +   SD  G + +      G +  ++S   ++  +    +S  G  +     SG    + 
Sbjct: 271 LAMTSD-GGNQAIVWNLKTGQEVTQLSSWSRQLIFSTARFSDDGTQLVTGSPSG---RVS 326

Query: 375 VMKKDGSQE 383
           +      + 
Sbjct: 327 IWDTQTGKR 335


>gi|225684909|gb|EEH23193.1| WD repeat domain 5B [Paracoccidioides brasiliensis Pb03]
          Length = 922

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 71/219 (32%), Gaps = 24/219 (10%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ QK+  A  D +    + + D              S + A +FS  G   L +   
Sbjct: 347 YSPDGQKIITAADDGK----IKVWDINSGFCIVTFTEHTSGVTACQFSKRGN-VLFTASL 401

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSP---DSSQIVFESDREGKEQLYVMQSNG 335
           D ++  + + ++       T         S+S    D S  V  +       +++     
Sbjct: 402 DGSIRAWDL-IRYRNFRTFTAPS----RLSFSCLAVDPSGEVVCAGSLDSFDVHIWSVQT 456

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
                     +       ++  G  +    +        +  +  + E  L   ++L + 
Sbjct: 457 GQLLDQLSGHQGPVSSLSFASDGSHLVSGSWDHTVRVWSIFGRSQTSE-PLELQADLLSV 515

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSID-------LNGRN 427
            + P G+ +  +   DG      +S+D       ++GR 
Sbjct: 516 AFRPDGKQIA-ASTLDGQLTF--WSVDDAVQVGGIDGRR 551



 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 27/231 (11%), Positives = 82/231 (35%), Gaps = 16/231 (6%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
            N  ++       +     + + + +A+ +     +L V+   +      K+ G+  S+ 
Sbjct: 286 FNQIHMLSVSQSNIDFVTMNNSGEWIAFGSPKLGQLL-VWEWQSE-SYILKQQGHLDSIN 343

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +S +G++  I+   D  + ++ ++         T       +  +S   + ++F +
Sbjct: 344 SL-VYSPDGQKI-ITAADDGKIKVWDIN-SGFCIVTFTEHTSGVTACQFSKRGN-VLFTA 399

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G  + + +     + +  +     S+      P G+++         F + +     
Sbjct: 400 SLDGSIRAWDL-IRYRNFRTFTAPSRLSFSCLAVDPSGEVVCAGSLD--SFDVHIWSVQT 456

Query: 381 SQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
            Q   +L      + + +++  G  L+      G     +    + GR++T
Sbjct: 457 GQLLDQLSGHQGPVSSLSFASDGSHLV-----SGSWDHTVRVWSIFGRSQT 502


>gi|159477777|ref|XP_001696985.1| hypothetical protein CHLREDRAFT_119935 [Chlamydomonas reinhardtii]
 gi|158274897|gb|EDP00677.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 532

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 19/166 (11%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                   +   R+ P+ + +A  + D        +     D+           I   R+
Sbjct: 362 TFTGHTDEVNAIRWDPSGRWLASCSDDR----TAKVWSLSSDKPAHDFREHEREIYTIRW 417

Query: 266 SSNGKR--------ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
           S  G           L S   D+ + ++ V++      +L        S ++SP+   + 
Sbjct: 418 SPTGTGTANPNLPLLLASASFDKTVRLWDVEV-GRCLHKLAKHSEPVYSVAFSPNGKLVA 476

Query: 318 FES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             S DR     +Y+  +      + S    A  ++  W  +GD +A
Sbjct: 477 TGSFDRW----MYIWSAVDGSLIK-SFKGSAGIYEVCWDHEGDRVA 517


>gi|37523641|ref|NP_927018.1| serine/threonine kinase [Gloeobacter violaceus PCC 7421]
 gi|35214646|dbj|BAC92013.1| glr4072 [Gloeobacter violaceus PCC 7421]
          Length = 946

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 75/210 (35%), Gaps = 15/210 (7%)

Query: 1   MSLRFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDE 60
           ++ R      +   I +  + + +GGF+ TS         + A+ +  +IA   F +ID 
Sbjct: 389 LTGRLRQPAAIAAGIGVLAVSLGVGGFWWTSNFG------SPASAAARTIAVLPFANIDG 442

Query: 61  ------LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
                     ++  ++  L +     +I+  +  Q      ++        LGA  ++TG
Sbjct: 443 DSRSAYFSDGMTFDITNQLGKIADLTVIASSAAMQYRGTTKALREVA--RELGAGTILTG 500

Query: 115 RVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN 174
            V + G +R+R+  +L D    +Q+  + +         I   +S+ I + +        
Sbjct: 501 SVRRNG-NRVRIVSQLVDPATGQQLWSQDYERQLKDVFAIQAEVSEQIARRLQARLSATE 559

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIR 204
              L    +         L   D  G   R
Sbjct: 560 KLRLTQVPTASITAYDYYLKGRDYLGRRSR 589


>gi|330952615|gb|EGH52875.1| oligopeptidase B [Pseudomonas syringae Cit 7]
          Length = 562

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 56/170 (32%), Gaps = 15/170 (8%)

Query: 262 APRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF- 318
           A   S + +R   S+    DE  ++Y  +L +     L      + S +++ DS  + F 
Sbjct: 8   AFSISPDHQRLAYSLDTSGDEIYELYVKELSTGQISSLPFEN-CDGSMTWANDSQTLFFG 66

Query: 319 ---ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIG 374
              E+ R GK  L+      S  + +  + +  +F   + S     +     S       
Sbjct: 67  ELDETHRPGK--LHRHTLGTSSAELVFDEPDGRFFLHCFRSSSERQLIILLNSKTTSEAW 124

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPS-----GRSLIFSRKKDGDTGSKLY 419
           V+  D  Q+         +   + P      G    F R         LY
Sbjct: 125 VLDADHPQQAFTCLAPRSEGHEYYPDHGLLNGVWTWFIRSNQSGINFALY 174


>gi|328770419|gb|EGF80461.1| hypothetical protein BATDEDRAFT_33248 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 315

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/213 (15%), Positives = 70/213 (32%), Gaps = 15/213 (7%)

Query: 193 LCVMDRDGAN---IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  + RD +N           +  + +   S + Q    A++D      + L D    + 
Sbjct: 42  VWRLTRDDSNYGVPYRSLTGHNHFVSDVVISSDGQFALSASWDK----TLRLWDLSTGKT 97

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-- 307
            ++     + +L+  FS + ++ + S  +D+++ ++  +        +         +  
Sbjct: 98  TRQFVGHTNDVLSVSFSPDNRQIV-SGSRDKSIKLW--NTLGECKYNIIEDGHSEWVSCV 154

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            +SP+    V  S     + + V   +    K               SP G L A     
Sbjct: 155 KFSPNPLNPVIVSS-GWDKLVKVWDLSKGKLKTNHYGHTGYINTITISPDGSLCASGGKD 213

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           G      +   DG     L     + A  +SP+
Sbjct: 214 GVTMLWDL--NDGKHLYSLEAGDIISALVFSPN 244



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 39/107 (36%), Gaps = 8/107 (7%)

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQG 358
            I  S   SPD    +  + R+    ++ +  + S+     R          D V S  G
Sbjct: 20  AIATSPE-SPD---TILSASRDKTVIVWRLTRDDSNYGVPYRSLTGHNHFVSDVVISSDG 75

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              A +    +   +  +    +  + +   +++ + ++SP  R ++
Sbjct: 76  QF-ALSASWDKTLRLWDLSTGKTTRQFVGHTNDVLSVSFSPDNRQIV 121


>gi|324505492|gb|ADY42359.1| DDB1- and CUL4-associated factor 11 [Ascaris suum]
          Length = 639

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 90/244 (36%), Gaps = 29/244 (11%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS +  + A++++       ++  + R     K +   R+     ++  +G   L +  +
Sbjct: 201 FSRHPTRAAFSSFQRASASNLFFPNRR-----KVVEKVRTKTFCCQYMPDGDGLL-TASQ 254

Query: 279 DEAMDIYSVDLQSNATERLTN-TLFINISASY-----SPDSSQIVFESDREGKEQLYVMQ 332
           DE + +Y  +       +L+N      +  S      SPDS   V+ +  E   Q  +  
Sbjct: 255 DELIRLYERE-GYRQRYKLSNCFQAPYVGWSILDLVVSPDSRHCVYCTWSEKLYQCNLEA 313

Query: 333 SNGSDQKRISQDKEASY-------FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ--E 383
             G D +  +  +           F   ++  G  I     +G    + V  ++ S    
Sbjct: 314 DVGEDDRWTTLHQNHGDDFGRFALFSLRFNFDGTEIV---SAGSDGRLYVYDRNSSSNVL 370

Query: 384 RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
            +   + ++ A ++  + R LIFS   DG    K++     G +   +   A   D   +
Sbjct: 371 SIPAHEDDVNAVSFGDTSRHLIFSAGDDG--LCKVWDRRALGEDHRPVGVFAGHRDG--I 426

Query: 444 GFMD 447
            ++D
Sbjct: 427 TYVD 430


>gi|298712378|emb|CBJ33162.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 972

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 60/169 (35%), Gaps = 25/169 (14%)

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFINISASY-SP 311
           G+    + A   S  G    + + ++  + ++ +  L   +   LT      +  +Y   
Sbjct: 65  GDEGLAVTAVAVSPAGDELAVGL-RNGDVKLHGLPKLDFKSM--LTRFTAPVLGLAYGMK 121

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           D   I   S+  G   + V++ + + +     D         W P+GD +A + F G   
Sbjct: 122 DGDVIAACSEEPG---IRVVRRSNNSKVLTLTDMSGGVKSVDWDPRGDFLAASGFDGTV- 177

Query: 372 AIGVMKK---DGSQERLLVEDSNLQA-------------PTWSPSGRSL 404
            +  +     D S E ++ E   ++                W P G+SL
Sbjct: 178 KVWRVDPSLDDLSTEVVMSESYFVKEAIGGSAEFEHLGKVAWHPDGKSL 226


>gi|302420729|ref|XP_003008195.1| WD repeat-containing protein [Verticillium albo-atrum VaMs.102]
 gi|261353846|gb|EEY16274.1| WD repeat-containing protein [Verticillium albo-atrum VaMs.102]
          Length = 515

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 6/117 (5%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G           + +    FSP+   VA A +D+     + +   R  R    +      
Sbjct: 391 GTKPVAKMNGHQKQVNHVTFSPDGNLVASAGWDN----HIKIWAARDGRFLATLRGHVGP 446

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +    FS++  R L++  +D  + ++S+         L        +  ++PD  ++
Sbjct: 447 VFQVAFSAD-SRLLVTCSRDTTLKVWSMS-TFKLVRDLPGHQDEVYAVDWAPDGKKV 501



 Score = 38.8 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/97 (12%), Positives = 27/97 (27%), Gaps = 4/97 (4%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPD + +           + +  +         +      F   +S    L+      
Sbjct: 409 TFSPDGNLVA---SAGWDNHIKIWAARDGRFLATLRGHVGPVFQVAFSADSRLLVTCSRD 465

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
                +  M        L      + A  W+P G+ +
Sbjct: 466 -TTLKVWSMSTFKLVRDLPGHQDEVYAVDWAPDGKKV 501



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 6/132 (4%)

Query: 231 YDDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
               D   +YL        P  ++   +  +    FS +G     S   D  + I++   
Sbjct: 375 ISASDDFLLYLHSPSQGTKPVAKMNGHQKQVNHVTFSPDGNLVA-SAGWDNHIKIWAA-R 432

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                  L   +      ++S DS  +V  S       L V   +     R     +   
Sbjct: 433 DGRFLATLRGHVGPVFQVAFSADSRLLVTCSR---DTTLKVWSMSTFKLVRDLPGHQDEV 489

Query: 350 FDPVWSPQGDLI 361
           +   W+P G  +
Sbjct: 490 YAVDWAPDGKKV 501



 Score = 36.5 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 18/183 (9%), Positives = 55/183 (30%), Gaps = 15/183 (8%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G   NS+ + + +    ++             +SP+ + +A  + D    +R++
Sbjct: 159 SSRLATGSGDNSVRIWNTETGTPQHTMTGHTGWTLCVAWSPDAKIIASGSMD--KTIRLW 216

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSS------NGKRALISVQKDEAMDIYSVDLQSNAT 294
             +  + R    +   +  I    +        +  R   S  KD  + ++  +      
Sbjct: 217 DPEKGVARGGA-LTGHQKWITQIAWQPYFLWTDDTPRLA-SASKDCTIRVWLAN-TGKTE 273

Query: 295 ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             L+          +    + ++F   ++  + +    +      +              
Sbjct: 274 HVLSGHRSSVTCVKWG--GTNLIFSGSQD--KTIRAWDAAKGTLVQTFTAHAHWVNHIAL 329

Query: 355 SPQ 357
           S  
Sbjct: 330 STD 332


>gi|157803806|ref|YP_001492355.1| acylamino-acid-releasing enzyme [Rickettsia canadensis str. McKiel]
 gi|157785069|gb|ABV73570.1| acylamino-acid-releasing enzyme [Rickettsia canadensis str. McKiel]
          Length = 679

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 37/96 (38%), Gaps = 4/96 (4%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTW--SPSG 401
                     +  G  I +         I +   D  S+   +  D +     +  + + 
Sbjct: 41  GNPDKTRVSLTHDGKYILYIAPKDGILNIWLAPADNISKATAITHDKDRGIRDYIVAYNN 100

Query: 402 RSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYA 437
           +++I+S+   GD   +LYS ++  +   LI TPA+ 
Sbjct: 101 KNIIYSKDHKGDENFRLYSYNIETKETKLI-TPAHD 135



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/178 (14%), Positives = 66/178 (37%), Gaps = 10/178 (5%)

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISAS 308
           P+++            + +GK  L    KD  ++I+     + +    +T+     I   
Sbjct: 35  PRKVLFGNPDKTRVSLTHDGKYILYIAPKDGILNIWLAPADNISKATAITHDKDRGIRDY 94

Query: 309 YSP-DSSQIVFESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWS---PQGDLIA 362
               ++  I++  D +G    +LY       + K I+   +        S   P   LI 
Sbjct: 95  IVAYNNKNIIYSKDHKGDENFRLYSYNIETKETKLITPAHDVRAGIVAVSYKNPNEILID 154

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGR-SLIFSRKKDGDTGSKLY 419
             + + + F +  +  +  ++ L++++   +   +       + ++   D D G++ Y
Sbjct: 155 LNERNPKYFDVYKLNLETLEKELVLKNEKFRG--FIVDNNLHIKYAAAPDKDGGTEYY 210


>gi|67972394|dbj|BAE02539.1| unnamed protein product [Macaca fascicularis]
          Length = 193

 Score = 44.6 bits (104), Expect = 0.032,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 48  GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 104

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 105 KLWDGRTGKYLGSLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 163

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 164 ADEVYAVDWSPDGQRVA 180


>gi|323455289|gb|EGB11158.1| hypothetical protein AURANDRAFT_22631 [Aureococcus anophagefferens]
          Length = 350

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 40/259 (15%), Positives = 83/259 (32%), Gaps = 28/259 (10%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
            +Y    G  G+F +                 L  +  D AN   +       + E  + 
Sbjct: 62  AVYAFSFGPTGEFAAS--------GGAERAIYLWEVYGDCANY-NVLRGHKNAVLELSWL 112

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + + +A A+ D+     V L D    +  K+      ++ A R ++  +  L+S   D 
Sbjct: 113 RDGRTLASASADE----SVALWDCHAGKRKKKYAGHGGVVNAVR-AARSEDTLVSGGDDG 167

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              ++  D +   + +     +   +  +  D+S+ VF    E   + + ++ +  D   
Sbjct: 168 CCVLW--DARERRSVKTLAGDYAVTAVCFDEDASR-VFAGGLEESVKCWDLRMD--DVVY 222

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA------ 394
             +    +      SP G  +       +     V    G ++RLL      Q       
Sbjct: 223 ELRGHADTITGLSLSPDGTKLLSNAMDAKLHCWDVQPAAG-EDRLLTTFVGHQHDFHKNL 281

Query: 395 --PTWSPSGRSLIFSRKKD 411
              +WS  G  +       
Sbjct: 282 LRCSWSSDGEKVACGSSDQ 300



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 39/122 (31%), Gaps = 11/122 (9%)

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D R+D     +      I     S +G + L S   D  +  + V   +     LT  +
Sbjct: 213 WDLRMDDVVYELRGHADTITGLSLSPDGTKLL-SNAMDAKLHCWDVQPAAGEDRLLTTFV 271

Query: 302 FINISA-------SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
                        S+S D  ++   S     + ++V     +++       + S  +  +
Sbjct: 272 GHQHDFHKNLLRCSWSSDGEKVACGSS---DQVVHVWDVATAEELYYLPGHKGSVNEVDF 328

Query: 355 SP 356
            P
Sbjct: 329 HP 330


>gi|302678519|ref|XP_003028942.1| hypothetical protein SCHCODRAFT_112017 [Schizophyllum commune H4-8]
 gi|300102631|gb|EFI94039.1| hypothetical protein SCHCODRAFT_112017 [Schizophyllum commune H4-8]
          Length = 963

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 30/231 (12%), Positives = 68/231 (29%), Gaps = 34/231 (14%)

Query: 220 SPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKR 271
            P+  ++A    D +        +    + +   P ++          +L  R++ +G+ 
Sbjct: 34  HPDGSRIATGGLDAKIRIWSTKPILNSASELSNKPPKLLCTLTMHTGPVLTVRWAHSGRW 93

Query: 272 ALISVQKDEAMDIYSVDLQSNA---------------TERLTNTLFINISASYSPDSSQI 316
              S   D  + I+ +D +                   +RL          ++SP    +
Sbjct: 94  LA-SGSDDAIVMIWDLDPRGRGRVWGSDEVNYEGWKPLKRLPGHDSDVTDVAWSPGDRYL 152

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              S       +           R+ Q  +       W P G+ +A T+       I   
Sbjct: 153 A--SVGLDSRVIIWCGFTLECLHRLDQ-HQGFVKGVCWDPVGEFLA-TQSDDRSVKIWRT 208

Query: 377 KKDGSQERLL------VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              G +  +          +  +  +WSP G  +  S   +      + ++
Sbjct: 209 SDWGLEAEVTKPFEDSPGSTFFRRLSWSPDGAHITASNATNNKGFVFIAAV 259



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 30/216 (13%), Positives = 70/216 (32%), Gaps = 26/216 (12%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYD------------DEDILRVYLMDTRIDRAPKRI 253
                   +   R++ + + +A  + D               +     ++    +  KR+
Sbjct: 74  TLTMHTGPVLTVRWAHSGRWLASGSDDAIVMIWDLDPRGRGRVWGSDEVNYEGWKPLKRL 133

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIY-SVDLQSNATERLTNTLFINISASYSPD 312
               S +    +S  G R L SV  D  + I+    L+     RL           + P 
Sbjct: 134 PGHDSDVTDVAWSP-GDRYLASVGLDSRVIIWCGFTLE--CLHRLDQHQGFVKGVCWDPV 190

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQ----DKEASYFDPVWSPQGDLIAFTKFSG 368
              +  +SD +   +++     G + +             +    WSP G  I  +  + 
Sbjct: 191 GEFLATQSD-DRSVKIWRTSDWGLEAEVTKPFEDSPGSTFFRRLSWSPDGAHITASNATN 249

Query: 369 EKFAIGVM-----KKDGSQERLLVEDSNLQAPTWSP 399
            K  + +          S+  L+  ++ ++  +++P
Sbjct: 250 NKGFVFIAAVITRNSWTSEISLVGHENTVEVASYNP 285


>gi|291233135|ref|XP_002736509.1| PREDICTED: Eif3b protein-like [Saccoglossus kowalevskii]
          Length = 696

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 68/174 (39%), Gaps = 14/174 (8%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES-- 320
           R+S  G       Q+  A+             ++       +    +SP    +V  S  
Sbjct: 226 RWSPKGTYLATFHQRGIALW------GGENFVQIMRFSHPGVQLIDFSPCERYMVTFSPL 279

Query: 321 -DREGKEQLYVMQSNGSDQKRISQDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMK 377
            D++   Q  ++    +  KR     E +   P+  WS  G    FT+ + +  ++  + 
Sbjct: 280 VDKKEDPQAIIIWDIRTGAKRRGFHCENAAQWPIFKWSHDGKY--FTRMAIDSLSVYEVP 337

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             G  ++  ++  +++  +WSPS   L +   ++ D  +++  +++  R E  +
Sbjct: 338 SFGLLDKKSIKIEDIRDFSWSPSDYMLAYWTPENSDIPARVTLLEIPSRKEVRV 391


>gi|224081793|ref|XP_002306492.1| predicted protein [Populus trichocarpa]
 gi|222855941|gb|EEE93488.1| predicted protein [Populus trichocarpa]
          Length = 517

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 47/242 (19%), Positives = 86/242 (35%), Gaps = 43/242 (17%)

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKD---RKQIIGKKFFSSPASWR---KIAH 156
           WN  G   L+TG   K           +WDV+    ++Q       +    WR     A 
Sbjct: 277 WNKKG-DYLLTGSCDKTA--------IVWDVRAEEWKQQFEFHSGPTLDVDWRNNVSFAT 327

Query: 157 TISDD-IY----------QSITGEKGDFNSRILFVSES---VVSGIIKNSLCVMDRDGAN 202
           + +D+ IY          +S  G +G+ N      + S     S  I   +  M +D   
Sbjct: 328 SSTDNMIYVCKVGETRPIKSFAGHQGEVNCVKWDPTGSLLASCSDDISAKIWSMKQDKYV 387

Query: 203 IRYLTPSRDQILFEPRFSPNQ-------QKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                 S++  ++  R+SP         Q++  A+   +    V L D    +    +  
Sbjct: 388 HDLREHSKE--IYTIRWSPTGPGTNNPNQQLVLASASFDST--VKLWDVEFGKLLSSLNG 443

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            R  + +  FS NG+    S   D  ++I+S+  +    +  T    I     ++ +  +
Sbjct: 444 HREPVYSVAFSPNGEYLA-SGSLDRCINIWSL-KEGKIVKTYTGNGGI-FEVCWNKEGDK 500

Query: 316 IV 317
           I 
Sbjct: 501 IA 502


>gi|169595546|ref|XP_001791197.1| hypothetical protein SNOG_00513 [Phaeosphaeria nodorum SN15]
 gi|160701117|gb|EAT92008.2| hypothetical protein SNOG_00513 [Phaeosphaeria nodorum SN15]
          Length = 1354

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 27/200 (13%), Positives = 68/200 (34%), Gaps = 18/200 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           ++S   Q  ++      +   +     R      R+      +    F+ +    L+S  
Sbjct: 146 KWSH-GQFSSHIATAAANGKVILYDLNRASVELTRLHEHNRQVHKLAFNPHQGYLLLSAS 204

Query: 278 KDEAMDIYS---VDLQSNATERLTNTLFINISAS---YSP-DSSQIVFESDREGKEQLYV 330
           +D  + ++    +    +      +   +N       +SP D+ +  F +D  G  Q + 
Sbjct: 205 QDATVRLWDLRDMRRDVSTCRSRDHYSGMNGGIRDVQWSPTDAVEFAFGTD-NGNIQRWD 263

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER---LLV 387
            + N   +++I+   +       W P G  +  +        +    +DG +++   +L 
Sbjct: 264 FRYNKGPKQKITAHDQRICTSIDWHPDGKHML-SSGVDRTVKVWDFSQDGRRQKPTWVLT 322

Query: 388 ED-----SNLQAPTWSPSGR 402
                  +  + P WS   +
Sbjct: 323 TPYPVHKARWRPPYWSDDHQ 342



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 60/180 (33%), Gaps = 13/180 (7%)

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY----- 329
           +   +  + +Y ++  S    RL          +++P    ++  + ++   +L+     
Sbjct: 158 TAAANGKVILYDLNRASVELTRLHEHNRQVHKLAFNPHQGYLLLSASQDATVRLWDLRDM 217

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               +    +           D  WSP      AF   +G           G ++++   
Sbjct: 218 RRDVSTCRSRDHYSGMNGGIRDVQWSPTDAVEFAFGTDNGNIQRWDFRYNKGPKQKITAH 277

Query: 389 DSNLQ-APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNET---LINTPAYASDPQWVG 444
           D  +  +  W P G+ ++       D   K++    +GR +    ++ TP      +W  
Sbjct: 278 DQRICTSIDWHPDGKHML---SSGVDRTVKVWDFSQDGRRQKPTWVLTTPYPVHKARWRP 334


>gi|149731568|ref|XP_001502155.1| PREDICTED: similar to WD repeat domain 5B [Equus caballus]
          Length = 330

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 37/221 (16%), Positives = 81/221 (36%), Gaps = 20/221 (9%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
                 + +   +FSP+ + +A ++ D      + +      +  K +      I    +
Sbjct: 36  TLVGHTEAVSSVKFSPSGEWLASSSADK----VIIIWGAYDGKYEKTLYGHSLEISDVAW 91

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREG 324
           SS+  R + S   D+ + I+  D++S    + L          +++P S+ I+  S    
Sbjct: 92  SSDSSRLV-SASDDKTLKIW--DVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSF--- 145

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ-E 383
            E + + +       +             ++  G LI    + G      +      Q  
Sbjct: 146 DESVKIWEVKTGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDG---VCRIWDAASGQCL 202

Query: 384 RLLVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
           ++LV+D N  +    +SP+G+ L+ +     D   KL+   
Sbjct: 203 KMLVDDDNPPVSFVKFSPNGKYLLIATL---DNTLKLWDYS 240


>gi|116329523|ref|YP_799243.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116329838|ref|YP_799556.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
 gi|116122267|gb|ABJ80310.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116123527|gb|ABJ74798.1| OmpA-family protein [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 684

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 17/72 (23%), Positives = 34/72 (47%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           N+ F     + SPD + ++F SDR G    + +  +  + K  S  +  +   P+ S + 
Sbjct: 178 NSNFNEKMPAISPDGNFLIFSSDRPGGYGDFDLWISVRNPKNGSWSQPKNLGSPLNSSES 237

Query: 359 DLIAFTKFSGEK 370
           +++ F    GE+
Sbjct: 238 EILPFIHQDGEQ 249



 Score = 39.6 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 24/73 (32%), Gaps = 11/73 (15%)

Query: 262 APRFSSNGKRALISVQKDEAM-----DIYSVDLQSNATER------LTNTLFINISASYS 310
            P  S +G   + S  +          I   + ++ +  +        N+    I     
Sbjct: 185 MPAISPDGNFLIFSSDRPGGYGDFDLWISVRNPKNGSWSQPKNLGSPLNSSESEILPFIH 244

Query: 311 PDSSQIVFESDRE 323
            D  Q+ F S+RE
Sbjct: 245 QDGEQLYFSSNRE 257


>gi|305665451|ref|YP_003861738.1| dipeptidyl aminopeptidase [Maribacter sp. HTCC2170]
 gi|88710206|gb|EAR02438.1| Dipeptidyl aminopeptidase [Maribacter sp. HTCC2170]
          Length = 749

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 22/152 (14%), Positives = 48/152 (31%), Gaps = 29/152 (19%)

Query: 308 SYSPDSSQI-VFESDR-----EGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDL 360
           S+S D++++ +F + R       +   +V+        +I    + A      +SP    
Sbjct: 107 SWSEDNTKLLIFTNTRKVWRYHTRGDYWVLDLKNGKLSQIGDSMEPARLMFAKFSPNAKK 166

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ------------------APTWSPSGR 402
           + F   +     I     +  +   L  D N +                     WSP   
Sbjct: 167 VGFVYKN----NIYTQILETGEVDQLTTDGNTEIINGTFDWVYEEELSCRDGFRWSPDSS 222

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            + F +      G+   + +++     +I  P
Sbjct: 223 QISFWQMDTKGMGTFYLANNIDSIYPKIIPLP 254


>gi|302790976|ref|XP_002977255.1| hypothetical protein SELMODRAFT_417153 [Selaginella moellendorffii]
 gi|300155231|gb|EFJ21864.1| hypothetical protein SELMODRAFT_417153 [Selaginella moellendorffii]
          Length = 810

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 66/202 (32%), Gaps = 28/202 (13%)

Query: 125 RVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
               RL+D      +      ++  S R     I              F      V  S 
Sbjct: 546 DASIRLYDTATATPM------NTLYSARYGVDHIC-------------FTHHTNAVIFSS 586

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
            +G  ++   +   D   +RY      ++      + +QQ + +A   +   ++++   +
Sbjct: 587 SNGSDESLRYLSLYDNRFLRYFRGHTQRVRGRLSVAYDQQGLVFAVAMEGGAIKLFDGRS 646

Query: 245 RIDRA--PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTL 301
                     +G   + +   +FS++GK  L+S        +Y +D          T   
Sbjct: 647 FDKGPFDTFLVGGDTAEVAGMKFSNDGKMMLLSTT---NSRVYLLDAYSGKKMHGFTLKP 703

Query: 302 FINIS---ASYSPDSSQIVFES 320
             +     AS+SPD   ++  S
Sbjct: 704 SRDGETLEASFSPDGRYVISGS 725


>gi|221119274|ref|XP_002153895.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 419

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 34/252 (13%), Positives = 85/252 (33%), Gaps = 49/252 (19%)

Query: 159 SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
           +DD+ + +  EK    SR L+                                  +F   
Sbjct: 143 ADDVLERVMNEKSAAESRQLY-----------------------------GHSGPVFGVS 173

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALIS 275
           F+ ++  +  ++ D    +R++ M T  +     + +++     +   +FS  G    +S
Sbjct: 174 FNHDKSFLLSSSED--GSVRLWSMHTFTN-----LVSWKGHIYPVWDVQFSPRG-YYFVS 225

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFES-DREGKEQLYVMQS 333
              D    ++    +S+ + R+      +++   + P+S+ +   S DR     + +   
Sbjct: 226 GSYDRTARLWC--TESSQSLRIFAGHLSDVNVIDFHPNSNYVATGSADRT----VRIWDL 279

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
                 R+    +A      +SP G  +  +    ++  +  + +           S + 
Sbjct: 280 QTGTSVRLFTGHKAGVLSVKFSPDGRHLV-SSGVDKRIILWDIAEAAPLAEFTGHSSTVN 338

Query: 394 APTWSPSGRSLI 405
           +  +S  G  L 
Sbjct: 339 SLCFSREGHMLA 350



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 49/150 (32%), Gaps = 12/150 (8%)

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILF----VSES 183
           + +WDV    Q   + ++    S+ + A     +  QS+    G  +   +      S  
Sbjct: 209 YPVWDV----QFSPRGYYFVSGSYDRTARLWCTESSQSLRIFAGHLSDVNVIDFHPNSNY 264

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V +G    ++ + D        L       +   +FSP+ + +  +  D     R+ L D
Sbjct: 265 VATGSADRTVRIWDLQTGTSVRLFTGHKAGVLSVKFSPDGRHLVSSGVDK----RIILWD 320

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
                         S + +  FS  G    
Sbjct: 321 IAEAAPLAEFTGHSSTVNSLCFSREGHMLA 350


>gi|254478543|ref|ZP_05091918.1| peptidase, S9A/B/C family, catalytic domain protein
           [Carboxydibrachium pacificum DSM 12653]
 gi|214035551|gb|EEB76250.1| peptidase, S9A/B/C family, catalytic domain protein
           [Carboxydibrachium pacificum DSM 12653]
          Length = 632

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 5/103 (4%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +PR S +  K+AY     +     Y     ++    R  +F      PRFS  G++ +  
Sbjct: 19  DPRISRDGLKIAYVLTKADLKNNEYKHTIVVEEKGSR--SFIENATMPRFSPTGRKMIFV 76

Query: 276 V--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              +  +  +I+  DL S +  ++     I +  +++ D  +I
Sbjct: 77  RKHRDKDVNEIFLCDLNSMSERKILELKDI-LDITWNKDDRRI 118



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 11/107 (10%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +  K A   DP  S  G  IA+       K +  K  I V+++ GS+  +     N   P
Sbjct: 10  TFTKFAYLKDPRISRDGLKIAYVLTKADLKNNEYKHTI-VVEEKGSRSFI----ENATMP 64

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +SP+GR +IF RK      ++++  DLN  +E  I       D  W
Sbjct: 65  RFSPTGRKMIFVRKHRDKDVNEIFLCDLNSMSERKILELKDILDITW 111


>gi|166364269|ref|YP_001656542.1| WD repeat-containing protein [Microcystis aeruginosa NIES-843]
 gi|166086642|dbj|BAG01350.1| WD-repeat protein [Microcystis aeruginosa NIES-843]
          Length = 312

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 65/177 (36%), Gaps = 6/177 (3%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +       I          +   +FS N Q +A    +++  + ++ +  +
Sbjct: 121 SGSEDKTVKIWSVKTGEILATLQGHSDKVLTVKFSQNGQLLASGGGENDKTVIIWNLGEK 180

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                K   ++   IL+  F SN K    S  KD+ + I+ +  +    + L+       
Sbjct: 181 SSITLKGHSDWFGGILSVDFGSNNKFLA-SGSKDKTIKIWDI-KRGTEVKTLSEHSDHIN 238

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           S S S ++  +   SD    + L +          IS       +   +SP G+ IA
Sbjct: 239 SVSVSTNNQLLASGSD---DKSLKLWDLKAGKAI-ISIPHPQKIYSVCFSPDGNYIA 291



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/223 (11%), Positives = 62/223 (27%), Gaps = 11/223 (4%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VSG    ++ +   +   +          +      P+ + +A  + D      V +   
Sbjct: 78  VSGGDDQTVRIWSLETKELISTLTGHQDKVTAVAVHPDGEIIASGSEDK----TVKIWSV 133

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +       +      +L  +FS NG+            D   +         +T     +
Sbjct: 134 KTGEILATLQGHSDKVLTVKFSQNGQLLA---SGGGENDKTVIIWNLGEKSSITLKGHSD 190

Query: 305 I-SASYSPD-SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 S D  S   F +     + + +       + +   +          S    L+A
Sbjct: 191 WFGGILSVDFGSNNKFLASGSKDKTIKIWDIKRGTEVKTLSEHSDHINSVSVSTNNQLLA 250

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
            +    +   +  +K  G     +     + +  +SP G  + 
Sbjct: 251 -SGSDDKSLKLWDLKA-GKAIISIPHPQKIYSVCFSPDGNYIA 291


>gi|73670714|ref|YP_306729.1| hypothetical protein Mbar_A3268 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397876|gb|AAZ72149.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 329

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 60/152 (39%), Gaps = 16/152 (10%)

Query: 297 LTNTLFINISAS--YSPD--SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           LTN +   +S+S  +SPD   + +V+  +R G  +L V       +  I+Q+ +      
Sbjct: 63  LTNRMDTTVSSSGAFSPDIYGNTLVWRDERSGTPKLAVYDIPTGTKSYITQNVDQYSKPA 122

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           ++   GD I ++        + +     S +  +   SN          + +  S  +D 
Sbjct: 123 IY---GDRIVWSADE----NVYLRNISTSTQNKIGNGSNPDIY----DTKVVYSSYSEDP 171

Query: 413 DTGSKLYSIDLNGRNETLINTPAYASDPQ-WV 443
           +    +   D+N   +  +++    + PQ W 
Sbjct: 172 EADMAIRMYDINTTEKITVSSHGDPTMPQIWG 203


>gi|20807982|ref|NP_623153.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase
           [Thermoanaerobacter tengcongensis MB4]
 gi|20516556|gb|AAM24757.1| Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
           [Thermoanaerobacter tengcongensis MB4]
          Length = 632

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 5/103 (4%)

Query: 216 EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS 275
           +PR S +  K+AY     +     Y     ++    R  +F      PRFS  G++ +  
Sbjct: 19  DPRISRDGLKIAYVLTKADLKNNEYKHTIVVEEKGSR--SFIENATMPRFSPTGRKMIFV 76

Query: 276 V--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
              +  +  +I+  DL S +  ++     I +  +++ D  +I
Sbjct: 77  RKHRDKDVNEIFLCDLNSMSERKILELKDI-LDITWNKDDRRI 118



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 11/107 (10%)

Query: 342 SQDKEASYFDPVWSPQGDLIAFT------KFSGEKFAIGVMKKDGSQERLLVEDSNLQAP 395
           +  K A   DP  S  G  IA+       K +  K  I V+++ GS+  +     N   P
Sbjct: 10  TFTKFAYLKDPRISRDGLKIAYVLTKADLKNNEYKHTI-VVEEKGSRSFI----ENATMP 64

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
            +SP+GR +IF RK      ++++  DLN  +E  I       D  W
Sbjct: 65  RFSPTGRKMIFVRKHRDKDVNEIFLCDLNSMSERKILELKDILDITW 111


>gi|47228600|emb|CAG07332.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 724

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 17/128 (13%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAY---------------ATYD 232
             ++ L  +D  G     L+      ++ PR SP+Q ++ Y                 YD
Sbjct: 271 NRRSFLFYVDLMGGKCEQLSSGTS-AVYSPRLSPDQCRIIYLECSVYGPHMQCSRLCMYD 329

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPR-FSSNGKRALISVQKDEAMDIYSVDLQS 291
                   ++D     A        S  L+P+ +S++ +R ++S  +    D+  VD+ +
Sbjct: 330 WYTKKTTVVVDVVNRSAKGGFTGIYSSQLSPQCWSADSQRIIVSSPQRSRKDLLMVDINT 389

Query: 292 NATERLTN 299
            +   LT+
Sbjct: 390 GSVTNLTS 397



 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 21/137 (15%), Positives = 41/137 (29%), Gaps = 19/137 (13%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF--ESDREGKEQLYVM----- 331
           +    ++ VDL     E+L++      S   SPD  +I++   S      Q   +     
Sbjct: 271 NRRSFLFYVDLMGGKCEQLSSGTSAVYSPRLSPDQCRIIYLECSVYGPHMQCSRLCMYDW 330

Query: 332 ----------QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
                       N S +   +    +      WS     I  +     +  + ++  +  
Sbjct: 331 YTKKTTVVVDVVNRSAKGGFTGIYSSQLSPQCWSADSQRIIVSSPQRSRKDLLMVDINTG 390

Query: 382 QERLLVEDSNLQAPTWS 398
               L   S +    WS
Sbjct: 391 SVTNLTSKSEVGN--WS 405


>gi|26354532|dbj|BAC40894.1| unnamed protein product [Mus musculus]
 gi|74191818|dbj|BAE32861.1| unnamed protein product [Mus musculus]
          Length = 560

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 31/240 (12%), Positives = 69/240 (28%), Gaps = 26/240 (10%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 337 ILRGHCGPVYSTRFLADSSGLLSCSEDM----SIRYWDLGSFTNTVLYQGHAYPVWDVDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+      ++    + P+S+ +   S   
Sbjct: 393 SP--FSLYFASGSHDRTARLWSFDR--TYPLRIYAGHLADVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
              L     ++ +  +SP    +  +     D   +++ I       T  NTPA  S  +
Sbjct: 503 FKELRGHTDSITSLAFSPDSGLIASASM---DNSVRVWDI-----RSTCCNTPADGSSGE 554



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 438 SNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLSFSPNGKYLASAGEDQ----RLK 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 494 LWDLASGTLFKELRGHTDSITSLAFSPDSGLIA-SASMDNSVRVWDI 539


>gi|327283109|ref|XP_003226284.1| PREDICTED: dipeptidyl peptidase 4-like [Anolis carolinensis]
          Length = 755

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 55/181 (30%), Gaps = 37/181 (20%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALI-- 274
           S N + ++   Y   +     L D         + N             S + K AL+  
Sbjct: 55  SYNLKWISGHQYIHINQSNAILFDVDNGSQTIILTNGTLATYNSSEVILSPDQKYALLRY 114

Query: 275 ----SVQKDEAMDIYSVDLQSNAT---ERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                 +       Y  DL S +    ++L   L       +SP   ++ +         
Sbjct: 115 NYEKVWRHSYKASYYLYDLGSRSLISGKQLPENLQYIT---WSPVGHKLAYVL----NNN 167

Query: 328 LYVMQSNGSDQKRISQDKE------------------ASYFDPVWSPQGDLIAFTKFSGE 369
           +Y+ ++  S   +I+ + E                   ++    WSP G  +A+ +    
Sbjct: 168 IYIRETPNSPDLQITHNGEENRIFNGLADWVYEEEMFGTHSALWWSPNGTFLAYAETDDT 227

Query: 370 K 370
           K
Sbjct: 228 K 228



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 54/152 (35%), Gaps = 23/152 (15%)

Query: 123 RLRVEFRLWDVKDRKQIIGKKFFSSPA--SWRKIAHTIS----DDIYQSITGEKGDFNSR 176
             +  + L+D+  R  I GK+   +    +W  + H ++    ++IY   T    D    
Sbjct: 123 SYKASYYLYDLGSRSLISGKQLPENLQYITWSPVGHKLAYVLNNNIYIRETPNSPD---- 178

Query: 177 ILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDI 236
            L ++ +     I N L            +  +   +     +SPN   +AYA  DD  +
Sbjct: 179 -LQITHNGEENRIFNGLADWVY----EEEMFGTHSAL----WWSPNGTFLAYAETDDTKV 229

Query: 237 LRV----YLMDTRIDRAPKRIGNFRSMILAPR 264
             +    Y  DT       RI   ++    P 
Sbjct: 230 PVIEYSFYSEDTLQYPKTIRIPYPKAGATNPT 261


>gi|297810869|ref|XP_002873318.1| WD-repeat protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319155|gb|EFH49577.1| WD-repeat protein [Arabidopsis lyrata subsp. lyrata]
          Length = 458

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 81/240 (33%), Gaps = 31/240 (12%)

Query: 143 KFFSSPASWRKIA-HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC----VMD 197
           ++ +    +R +   T S  + Q  +        +I ++  ++ S  I   L     +  
Sbjct: 20  RYVAVANDYRLVIRDTFSFQVVQLFS-----CLDKISYIEWALDSEYILCGLYKKPMIQA 74

Query: 198 RDGANIRYLTPSRDQI--LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                  +     +    +   R+SP+ + +   +   E  LR+ +              
Sbjct: 75  WSLTQPEWTCKIDEGPAGISYARWSPDSRHILTTS---EFQLRLTVWSLLNTACVHVQWP 131

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSP 311
                    F+ +GK A I  ++D    +  +  QS     +  +  ++        +SP
Sbjct: 132 KHGSK-GVAFNQDGKFAAICTRRDCKDYVNLLSCQS---WEIMGSFAVDTLDLADLEWSP 187

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFS 367
           D S IV   D   + ++ +   +G   + + + +       V    WSP G  +A   + 
Sbjct: 188 DDSSIV-VWDSPLEYKVLIYSPDG---RCLFKYQAYECGLGVKTVSWSPCGQFLAIGSYD 243



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 24/197 (12%), Positives = 63/197 (31%), Gaps = 11/197 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++ + +   Y          +            +I    + I   R+S + +  L + + 
Sbjct: 55  WALDSE---YILCGLYKKPMIQAWSLTQPEWTCKIDEGPAGISYARWSPDSRHILTTSEF 111

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              + ++S+ L +     +        +  +++ D       + R+ K+ + ++     +
Sbjct: 112 QLRLTVWSL-LNTACVHVQWPKHGSKGV--AFNQDGKFAAICTRRDCKDYVNLLSCQSWE 168

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQA 394
                        D  WSP    I     S  ++ + +   DG    + +       ++ 
Sbjct: 169 IMGSFAVDTLDLADLEWSPDDSSIV-VWDSPLEYKVLIYSPDGRCLFKYQAYECGLGVKT 227

Query: 395 PTWSPSGRSLIFSRKKD 411
            +WSP G+ L       
Sbjct: 228 VSWSPCGQFLAIGSYDQ 244


>gi|281358407|ref|ZP_06244889.1| conserved hypothetical protein [Victivallis vadensis ATCC BAA-548]
 gi|281315234|gb|EFA99265.1| conserved hypothetical protein [Victivallis vadensis ATCC BAA-548]
          Length = 395

 Score = 44.6 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 22/165 (13%), Positives = 51/165 (30%), Gaps = 16/165 (9%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSR--DQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
                K  +   + DG  +R   P      ++    +     ++              + 
Sbjct: 222 RRPRWKTFMYTSNLDGGELRCPLPDFYWHGMISHQIWGRTPNEILIDANWRGKGSEYLVF 281

Query: 243 DTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTN 299
           D R      +RI   +  +    FS +G+  L       D    +  V+  +    RL +
Sbjct: 282 DERELPLRAERISAGQGPMGHLVFSPDGRTMLADTYPDADGRQYLALVEAATGKLVRLGS 341

Query: 300 --------TLFI---NISASYSPDSSQIVFESDREGKEQLYVMQS 333
                   T      ++   +S     +  +S  +G+  +Y+++ 
Sbjct: 342 FLHRQPAGTPGDVRCDLHPRWSQSGRFVTVDSIDDGRRGVYLLEL 386


>gi|295690110|ref|YP_003593803.1| hypothetical protein Cseg_2736 [Caulobacter segnis ATCC 21756]
 gi|295432013|gb|ADG11185.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756]
          Length = 442

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 29/217 (13%), Positives = 62/217 (28%), Gaps = 42/217 (19%)

Query: 152 RKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN----IRYLT 207
           RK+ H  +D +              ++F  E     + +  L ++  D  N      +  
Sbjct: 224 RKVVHQATDWLNHLQFSPTDPGL--LMFCHEGPWHKVDR--LWLVRTDKPNDAPVKIHTR 279

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDI--------------------LRVYLMDTRID 247
               +I     FS + + V Y                               + +     
Sbjct: 280 TMNMEIAGHEWFSADGKTVWYDLQTPRGEDFWVAGYEIATGKRNWLHLERNAWSVHFNSS 339

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA---------TERLT 298
              K              + +GK  ++ ++     D+  +                ERL 
Sbjct: 340 PDGKLFAGDGGDSEMVAHAPDGKWIVL-LKPRAIPDVAGIHAPGAEHLISPGVLDAERLV 398

Query: 299 NTLFINI--SAS--YSPDSSQIVFESDREGKEQLYVM 331
           +    +     +  ++PD+  +VF S+  G  Q+Y +
Sbjct: 399 DMRGHDYRLEPNVNFTPDAKWLVFRSNMHGANQVYAV 435



 Score = 41.2 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 33/230 (14%), Positives = 78/230 (33%), Gaps = 24/230 (10%)

Query: 203 IRYLTPSRDQILFEPRFSP-NQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMI 260
            R +       L   +FSP +   + +        + R++L+ T          + R+M 
Sbjct: 223 ERKVVHQATDWLNHLQFSPTDPGLLMFCHEGPWHKVDRLWLVRTDKPNDAPVKIHTRTMN 282

Query: 261 LAPR----FSSNGKRALISVQKDEAMDIYS--VDLQSNATERL-TNTLFINISASYSPDS 313
           +       FS++GK     +Q     D +    ++ +     L       ++  + SPD 
Sbjct: 283 MEIAGHEWFSADGKTVWYDLQTPRGEDFWVAGYEIATGKRNWLHLERNAWSVHFNSSPDG 342

Query: 314 SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
                    +G +   V  +       + + +       + +P  + +      G   A 
Sbjct: 343 KLFA----GDGGDSEMVAHAPDGKWIVLLKPRAIPDVAGIHAPGAEHLI---SPGVLDAE 395

Query: 374 GVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            ++   G   RL           ++P  + L+F     G   +++Y++++
Sbjct: 396 RLVDMRGHDYRL------EPNVNFTPDAKWLVFRSNMHG--ANQVYAVEI 437


>gi|260463159|ref|ZP_05811361.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
 gi|259031009|gb|EEW32283.1| conserved hypothetical protein [Mesorhizobium opportunistum
           WSM2075]
          Length = 324

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 37/242 (15%), Positives = 72/242 (29%), Gaps = 23/242 (9%)

Query: 173 FNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + + +    +  ++     +  V   DG    ++ P   + L    FSP   +   A Y+
Sbjct: 88  WITSVAAGPQGAIAYATGKTAFVRFADGKTREFVHPRSVEGL---AFSPKGMRFGVARYN 144

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
                   L     +  P  +  +        FS +G   + ++Q++ A+  +   L   
Sbjct: 145 G-----ATLHFPAAEGKPVEL-EWAGAHTGITFSPDGAFLVTTMQEN-ALHGWK--LADG 195

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD------QKRISQDKE 346
              R+T       S S+S     +       G     V   +G D         +     
Sbjct: 196 KHMRMTGYPGKVKSLSWSVKGKWLA----SSGAPAAIVWPFSGKDGPMGKAPLELGTRGN 251

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
           A        P  D++A     G   A+          R   +   + +  W    R + F
Sbjct: 252 AMVTAVACHPSQDVVAVGYDDGMVMAVRFSDAKEVLLRRPGK-GAITSMMWDKEERRIAF 310

Query: 407 SR 408
             
Sbjct: 311 GS 312



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 54/176 (30%), Gaps = 28/176 (15%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +GK  + +V+           L S   + +T+       A          F    +GK +
Sbjct: 66  DGK--VFAVKAGGEAQE----LASAGKKWITSVAAGPQGAIAYATGKT-AFVRFADGKTR 118

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
            +V                 S     +SP+G      +++G             +   L 
Sbjct: 119 EFV--------------HPRSVEGLAFSPKGMRFGVARYNGATLHF---PAAEGKPVELE 161

Query: 388 EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
                   T+SP G  L+ + +++   G KL     +G++  +   P       W 
Sbjct: 162 WAGAHTGITFSPDGAFLVTTMQENALHGWKL----ADGKHMRMTGYPGKVKSLSWS 213


>gi|255530411|ref|YP_003090783.1| 3-carboxymuconate cyclase-like protein [Pedobacter heparinus DSM
           2366]
 gi|255343395|gb|ACU02721.1| 3-carboxymuconate cyclase-like protein [Pedobacter heparinus DSM
           2366]
          Length = 372

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 27/219 (12%), Positives = 67/219 (30%), Gaps = 26/219 (11%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF---SSNGKRALISVQ 277
            N   +            +YL +  ++ A  +  +    +  P +   S + K      +
Sbjct: 22  NNYNLIIGTYTSPGKSEGIYLYNFDVNTADFKFRSVAKDVTNPSYLALSKDNKFVYSVAE 81

Query: 278 KDEAMDIYSVDLQS--NATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-LYVMQSN 334
                 + +            L      +    +   + + VF ++  G    ++ ++ +
Sbjct: 82  APGISAVAAFGFDGVKGQFRFLNKQATNSQGPCFVTTNGKNVFSANYGGGSMSVFGIEKD 141

Query: 335 GS--DQKRISQDKE-----------ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
           GS    K++ Q              A      ++P G  +  T    ++  I     +G 
Sbjct: 142 GSLSPLKQLVQHTGKSIDPKKRQESAHAHQVQFTPDGKYLVCTDLGEDQVYIYNYHPEGK 201

Query: 382 QERL-------LVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            + L           S  +   +SP+G+    + + +G 
Sbjct: 202 DQLLRVKNTVKTTPGSGPRHLAFSPNGKFAYLAHEFNGS 240



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 75/223 (33%), Gaps = 29/223 (13%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI- 253
           ++   G +I            + +F+P+ + +   T   ED + +Y           R+ 
Sbjct: 150 LVQHTGKSIDPKKRQESAHAHQVQFTPDGKYLV-CTDLGEDQVYIYNYHPEGKDQLLRVK 208

Query: 254 ----GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-- 307
                   S      FS NGK A ++ + + ++  +S    S    ++     I  +   
Sbjct: 209 NTVKTTPGSGPRHLAFSPNGKFAYLAHEFNGSITAFSY--ASGNLNKI---QEIGTAPKD 263

Query: 308 ----------SYSPDSSQIVFESDREGKEQL--YVMQSNG--SDQKRISQDKEASYFDPV 353
                       SPD  + ++E++R     +  + +Q++G  S  + IS   +    + V
Sbjct: 264 FSGRIDGADIHVSPDG-RFLYETNRGDANTISAFAVQADGKLSFIETISTMGKGP-RNFV 321

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
             P G  +           I    K     +   +   + AP 
Sbjct: 322 IDPSGKYLLIGHQYTNDIVIFERNKKTGTLKDTGKRMEIGAPV 364


>gi|297190983|ref|ZP_06908381.1| peptidase C14 [Streptomyces pristinaespiralis ATCC 25486]
 gi|197721896|gb|EDY65804.1| peptidase C14 [Streptomyces pristinaespiralis ATCC 25486]
          Length = 357

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 35/230 (15%), Positives = 68/230 (29%), Gaps = 32/230 (13%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           LT   D  +    FSP+  + A           V  +      AP  +      + A  F
Sbjct: 11  LTVEHDGSVQAIAFSPDSTRFA-----SGGSDSVLRVRGTGVGAPLDV-PCEGSVSAIAF 64

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATE---RLTNTLFINISASYSPDSSQIVFESDR 322
             +G    ++    +   ++     + A      L     +N    ++PD   +      
Sbjct: 65  GPDGAALAVA----DFEQVFLRSGATGAVIWQGPLEPGSSVNTV-RFAPDGKVVATT--- 116

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKFSGEKFAIG-----V 375
              + L ++        R          D   S  G  +  A  +  G           +
Sbjct: 117 --DQVLVLLDGATGATSRKITVDTPLIADVDLSADGTRVVLAIDERHGGDHRNAGSARVL 174

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLIF------SRKKDGDTGSKLY 419
               G++   L  D  + A  +SP    ++       +R    D G++L+
Sbjct: 175 ELATGAEITRLTPDDAVLAVAFSPDASLVLCCAADDTTRMFQADDGTQLW 224



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 42/249 (16%), Positives = 96/249 (38%), Gaps = 36/249 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           RF+P+ + VA           + L+D       ++I     +I     S++G R ++++ 
Sbjct: 105 RFAPDGKVVATTDQ------VLVLLDGATGATSRKITVDTPLIADVDLSADGTRVVLAID 158

Query: 278 KDEAMD------IYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
           +    D         ++L + A   RLT    + ++ ++SPD+S ++  +  +   +++ 
Sbjct: 159 ERHGGDHRNAGSARVLELATGAEITRLTPDDAV-LAVAFSPDASLVLCCA-ADDTTRMFQ 216

Query: 331 MQSNGSDQKRISQDKEASYFDP---VWSPQGDLIAFTKFSGEKFAIGVMKK--DGSQERL 385
              +G+     + D E     P    + P+G         G    +        G   +L
Sbjct: 217 AD-DGTQLWPTADDVEDQVTAPNCLAFDPKGKWTVVGGSDGFARVLEAESGVEKGRAPKL 275

Query: 386 ---LVEDSN--LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-----A 435
              L +     +    + P+G+    +     D   +L+  +L+G+    + T       
Sbjct: 276 APGLPDPGLGAVTHVAFGPNGKV---AASASIDNVVRLF--NLDGKERYAVPTDEVLAME 330

Query: 436 YASDPQWVG 444
           ++ D +W+G
Sbjct: 331 FSPDGRWLG 339



 Score = 37.7 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 69/200 (34%), Gaps = 28/200 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISV 276
            F P+   +A A ++     +V+L          +        +   RF+ +GK    + 
Sbjct: 63  AFGPDGAALAVADFE-----QVFLRSGATGAVIWQGPLEPGSSVNTVRFAPDGKVVATTD 117

Query: 277 QKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD-REGKEQLYVMQ-- 332
           Q      +  +D  + AT R +T    +      S D +++V   D R G +        
Sbjct: 118 QV-----LVLLDGATGATSRKITVDTPLIADVDLSADGTRVVLAIDERHGGDHRNAGSAR 172

Query: 333 ----SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
               + G++  R++ D   +     +SP   L+                 DG+Q     +
Sbjct: 173 VLELATGAEITRLTPDD--AVLAVAFSPDASLVLCCAADDTTRMF--QADDGTQLWPTAD 228

Query: 389 DSNLQ--AP---TWSPSGRS 403
           D   Q  AP    + P G+ 
Sbjct: 229 DVEDQVTAPNCLAFDPKGKW 248


>gi|189463664|ref|ZP_03012449.1| hypothetical protein BACCOP_04390 [Bacteroides coprocola DSM 17136]
 gi|189429642|gb|EDU98626.1| hypothetical protein BACCOP_04390 [Bacteroides coprocola DSM 17136]
          Length = 384

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 47/141 (33%), Gaps = 12/141 (8%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVD------LQSNATERLTNTLFINISASYSPDSSQIVF 318
           F+ +GK A +  +    + + S D      +Q+   + L      +I    SPD +  V+
Sbjct: 239 FAPDGKHAYLITELSGDVIVLSYDEMKLDTIQTIKADTLDARGSADI--HISPDGN-FVY 295

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---VWSPQGDLIAFTKFSGEKFAIGV 375
            S+R   + + +   N  D        + +   P     +P G  +        +  I  
Sbjct: 296 ASNRLKGDGIAIFSVNSEDGTLEKAGYQPTGIHPRNFAITPNGKYLLVACRDTNEIQIFA 355

Query: 376 MKKDGSQERLLVEDSNLQAPT 396
              +    +   E   +  P 
Sbjct: 356 RDAETGLLQDTGEKIEMSKPV 376


>gi|126307247|ref|XP_001379129.1| PREDICTED: similar to PCAF associated factor 65 beta [Monodelphis
           domestica]
          Length = 589

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 25/217 (11%), Positives = 60/217 (27%), Gaps = 18/217 (8%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF 265
           +       ++  RF  +   +   + D      +   D                +     
Sbjct: 337 ILRGHCGPVYSTRFLSDSSGLLSCSEDM----SIRYWDLGSFTNTVLYQGHAYPVWDLDI 392

Query: 266 SSNGKRALI-SVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDRE 323
           S         S   D    ++S D       R+      ++    + P+S+ +   S   
Sbjct: 393 SP--CSLYFASGSHDRTARLWSFDR--TYPLRIYAGHLADVDCVKFHPNSNYLATGST-- 446

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
             + + +  +   +  R+            +SP G  +A    +GE   + +        
Sbjct: 447 -DKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLA---SAGEDQRLKLWDLASGTL 502

Query: 384 --RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
              L     N+ + T+SP    +  +   +      +
Sbjct: 503 YKELRGHTDNITSLTFSPDSSLIASASMDNSVRVWDI 539



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 37/107 (34%), Gaps = 5/107 (4%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S  + +G    ++ +      N   L       +    FSPN + +A A  D     R+ 
Sbjct: 438 SNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQ----RLK 493

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           L D       K +      I +  FS +      S   D ++ ++ +
Sbjct: 494 LWDLASGTLYKELRGHTDNITSLTFSPDSSLIA-SASMDNSVRVWDI 539


>gi|145522492|ref|XP_001447090.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124414590|emb|CAK79693.1| unnamed protein product [Paramecium tetraurelia]
          Length = 479

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 42/106 (39%), Gaps = 5/106 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E +VS     +L + +   +  +       Q +   +FSP+ + +  A++D      + +
Sbjct: 336 ERLVSASDDQTLMLWEYTSSKPKVRMTGHQQQVNHVQFSPDGRYIVSASFDK----SLRI 391

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            D         +      +    +SS+ +  L S  KD  + ++S+
Sbjct: 392 WDGYNGNWIATLRGHVGSVYQVSWSSDSRYML-SASKDSTLKLWSL 436



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 39/220 (17%), Positives = 80/220 (36%), Gaps = 29/220 (13%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--R 296
           + L D   +     +   ++ +L   +S + K    S   D  + I+  D+++N  +   
Sbjct: 144 IRLWDMLTETPIATLKGHKNWVLCLAWSPDCKYIA-SGSHDGQVCIW--DVETNQLKGQP 200

Query: 297 LTNTLFINISASYSP---DSS-QIVFESDREGKEQLY------VMQSNGSDQKRISQDKE 346
           L        S ++ P   D    +V  S ++G  +++       + S  + QK I++   
Sbjct: 201 LIGHTKWVTSIAWQPMHLDEECTLVASSSKDGSVRIWSRISLSCLISINAHQKAITKMLW 260

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL----LVEDSNLQAPTWSPSGR 402
                   + +   I     SG++    V +  G    +    L  D  ++   +S  G 
Sbjct: 261 GGQGYIYTASEDTTIGVWNKSGKR----VQELKGHGHWVNSIALHTDYTIRCACFS-EGN 315

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                 + +      LY   LNG+NE L++     +   W
Sbjct: 316 -----TEINRKQAKVLYDKMLNGKNERLVSASDDQTLMLW 350



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RL    D + ++  ++ SS    R   H     +        G            +VS  
Sbjct: 337 RLVSASDDQTLMLWEYTSSKPKVRMTGHQ--QQVNHVQFSPDG----------RYIVSAS 384

Query: 189 IKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              SL +   DG N  ++         +++  +S + + +  A+ D      + L   + 
Sbjct: 385 FDKSLRIW--DGYNGNWIATLRGHVGSVYQVSWSSDSRYMLSASKDS----TLKLWSLQK 438

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +    +      + A  ++  G     S  KD  + I+ 
Sbjct: 439 KKLAFDLPGHADEVYAVDWAPIGGEKAGSGGKDRRVKIWR 478


>gi|145491297|ref|XP_001431648.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124398753|emb|CAK64250.1| unnamed protein product [Paramecium tetraurelia]
          Length = 479

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 42/106 (39%), Gaps = 5/106 (4%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           E +VS     +L + +   +  +       Q +   +FSP+ + +  A++D      + +
Sbjct: 336 ERLVSASDDQTLMLWEYTSSKPKVRMTGHQQQVNHVQFSPDGRYIVSASFDK----SLRI 391

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
            D         +      +    +SS+ +  L S  KD  + ++S+
Sbjct: 392 WDGYNGNWIATLRGHVGSVYQVSWSSDSRYML-SASKDSTLKLWSL 436



 Score = 39.6 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 80/220 (36%), Gaps = 29/220 (13%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE--R 296
           + L D   +     +   R+ +L   +S + K    S   D  + I+  D+++N  +   
Sbjct: 144 IRLWDMLTETPIATLKGHRNWVLCLAWSPDCKYIA-SGSHDGQVCIW--DVETNQLKGQP 200

Query: 297 LTNTLFINISASYSP---DSS-QIVFESDREGKEQLY------VMQSNGSDQKRISQDKE 346
           L        S ++ P   D    +V  S ++G  +++       + S  + QK I++   
Sbjct: 201 LIGHTKWVTSIAWQPMHLDEECTLVASSSKDGSVRIWSRTSLSCLISINAHQKAITKMLW 260

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL----LVEDSNLQAPTWSPSGR 402
                   + +   I     SG++    V +  G    +    L  D  L+   +S  G 
Sbjct: 261 GGQGYIYTASEDTTIGVWNKSGKR----VQELKGHGHWVNSIALHTDYTLRCACFS-EGN 315

Query: 403 SLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQW 442
                 + +      LY   L+G+NE L++     +   W
Sbjct: 316 I-----EINRKQAKVLYDKMLSGKNERLVSASDDQTLMLW 350



 Score = 37.7 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 52/160 (32%), Gaps = 20/160 (12%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RL    D + ++  ++ SS    R   H     +        G            +VS  
Sbjct: 337 RLVSASDDQTLMLWEYTSSKPKVRMTGHQ--QQVNHVQFSPDG----------RYIVSAS 384

Query: 189 IKNSLCVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
              SL +   DG N  ++         +++  +S + + +  A+ D      + L   + 
Sbjct: 385 FDKSLRIW--DGYNGNWIATLRGHVGSVYQVSWSSDSRYMLSASKDS----TLKLWSLQK 438

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYS 286
            +    +      + A  ++  G     S  KD  + I+ 
Sbjct: 439 KKLAFDLPGHADEVYAVDWAPIGGEKAGSGGKDRRVKIWR 478


>gi|47227557|emb|CAG04705.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 504

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 46/288 (15%), Positives = 95/288 (32%), Gaps = 42/288 (14%)

Query: 109 QVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITG 168
           Q LVTG V       + V    W+    K     K+ +           + DD    +  
Sbjct: 218 QYLVTGSV----DGFIEV----WNFTTGKIRKDLKYQAQDNFM------MMDDAVLCMCF 263

Query: 169 EKGDFNSRILFVSESVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            +          +E + +G     + V   + G  +R    +  + +    F  +  ++ 
Sbjct: 264 SRD---------TEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCVSFCKDSSQLL 314

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
             ++D      + +   +  +  K      S +    F+ +G    IS   D  + ++++
Sbjct: 315 STSFDQ----TIRIHGLKSGKTLKEFRGHSSFVNEATFTPDGHHI-ISASSDGTVKVWNM 369

Query: 288 DLQ--SNATERLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
                +N  + L  +   +I+ +     P + +     +R     + +M   G   +  S
Sbjct: 370 KTTECTNTFKPLGTSAGTDITVNNILLLPKNPEHFVVCNRS--NTVVIMNMQGQIVRSFS 427

Query: 343 QDKE--ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLV 387
             K     +     SP+G+ I      GE F +       G  ER L 
Sbjct: 428 SGKREGGDFVCCTLSPRGEWIYCV---GEDFVLYCFSTVTGKLERTLT 472



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 25/200 (12%), Positives = 68/200 (34%), Gaps = 27/200 (13%)

Query: 241 LMDTRIDRAPKRIG-----NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
           + D   +R P ++        +S +   RFS +G+  + +   D  ++++  +  +    
Sbjct: 184 VKDVEEERFPTQLSRQIKFGQKSHVECSRFSPDGQYLV-TGSVDGFIEVW--NFTTGKIR 240

Query: 296 RLTNTLFINIS---------ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +       +             +S D+  +     ++GK +++ +  +G   +R  +   
Sbjct: 241 KDLKYQAQDNFMMMDDAVLCMCFSRDTEMLA-TGAQDGKIKVWKI-QSGQCLRRFERAHS 298

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSL 404
                  +      +  T F      I +      +         S +   T++P G  +
Sbjct: 299 KGVTCVSFCKDSSQLLSTSFDQT---IRIHGLKSGKTLKEFRGHSSFVNEATFTPDGHHI 355

Query: 405 IFSRKKDGDTGSKLYSIDLN 424
           I +     D   K++++   
Sbjct: 356 ISASS---DGTVKVWNMKTT 372


>gi|307133292|ref|YP_003885308.1| High-affnity carbon uptake protein Hat/HatR [Dickeya dadantii 3937]
 gi|306530821|gb|ADN00752.1| High-affnity carbon uptake protein Hat/HatR [Dickeya dadantii 3937]
          Length = 566

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 48/289 (16%), Positives = 90/289 (31%), Gaps = 24/289 (8%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D          G    +  +V+ +       N L + D    N   +    D ++ +  F
Sbjct: 3   DKDMIHTAPISGIAAYKNRYVATAG----YDNRLILWDAQTHNAIAMGT-HDHLVNQCAF 57

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP   K+  A+ D        +      R  K I   +  +L   FS +G+         
Sbjct: 58  SPCGTKLVSASSD----YSARIWQLPEMRLQKVINFHQDDVLKADFSPSGEYIATCSYDC 113

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               +   DL  N   R+     I  S  +S DS  +      +G  + +       +Q 
Sbjct: 114 ---TLTVSDLDGNLVSRMVGHDNIIESFDWSHDSLTLT-SVGMDGTVRTW--DIKTGEQI 167

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP 399
            I  +                I        +  I ++++DG + ++   +S ++    + 
Sbjct: 168 NIVSNGNTDIDAIAHISAKTKIV----GDNEGYISLIREDG-ETKIKAHNSAVKKIAINK 222

Query: 400 SGRSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYASDPQWVGFMD 447
                  +         +L   D L   NET +   A+      V F+D
Sbjct: 223 DASLFATTSYDGRLIIWELVGYDQLEKVNETELPKIAWPRS---VAFLD 268


>gi|196015141|ref|XP_002117428.1| hypothetical protein TRIADDRAFT_61487 [Trichoplax adhaerens]
 gi|190579957|gb|EDV20044.1| hypothetical protein TRIADDRAFT_61487 [Trichoplax adhaerens]
          Length = 977

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 15/160 (9%)

Query: 211 DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK 270
            + +    FS +   +A        I  + + DT +        + +  I    FS + +
Sbjct: 383 SESITSSCFSSDGTMLACCD----KIGNIIIYDTILWTPLYSFHSTKGKISNCSFSPDCQ 438

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFESDREGKEQ 327
           +  +S       ++++++      + L    +     ++   SP   ++V  SD      
Sbjct: 439 KIALSF-HCGKTEVWNIN----NEKILIEHGYHTAKVNWSEFSPSGQEVVSCSD---DRL 490

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           + +  SN  +     +  +    D  +S  G  I    + 
Sbjct: 491 IMIWNSNTGNNIVTCRGHKNMVIDCHYSKDGGRILSCSWD 530


>gi|62751729|ref|NP_001015771.1| echinoderm microtubule associated protein like 1 [Xenopus
           (Silurana) tropicalis]
 gi|58476784|gb|AAH89711.1| MGC108311 protein [Xenopus (Silurana) tropicalis]
          Length = 659

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 54/179 (30%), Gaps = 24/179 (13%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F P+   VA  T       R  ++D++       + +    I    +S +G    +    
Sbjct: 436 FHPSGSVVAVGTSSG----RFLVLDSQTHVIVTSVSDAAEQISVTSYSPDGHYLAV-GSH 490

Query: 279 DEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           D  + +Y V  +     R+   T          ++ DSS  +  S   G  ++     + 
Sbjct: 491 DNFIYLYEVAEEGREYRRVGKCTGHSSFVTHLDWASDSSSFMTNS---GDYEILYWDPDS 547

Query: 336 -------SDQKRISQDKE----ASYFDPVWSP--QGDLIAFTKFSGEKFAIGVMKKDGS 381
                   + + I  +        Y   +W     G  I     S ++  +      G 
Sbjct: 548 CKQIVSAENVRNIDWENSSCTLGFYVLGIWPDGADGTDINAVTRSHDRKQLATGDDFGG 606


>gi|330845074|ref|XP_003294426.1| hypothetical protein DICPUDRAFT_159422 [Dictyostelium purpureum]
 gi|325075108|gb|EGC29042.1| hypothetical protein DICPUDRAFT_159422 [Dictyostelium purpureum]
          Length = 913

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 70/194 (36%), Gaps = 13/194 (6%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           Y        +     +   + +A+   D   +L V+   +      K+ G+  +M     
Sbjct: 306 YKLNVSSHSINTAAINNTGEWLAFGCSDMGQLL-VWEWRSET-YILKQQGHSYNMN-CVA 362

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQ-IVFESDR 322
           +S +G+    +  +D  + I+  +  S       ++      S  YSP +SQ +VF +  
Sbjct: 363 YSPDGQTIA-TGGEDGKVKIW--NTTSGYCFITFSDHEGPVTSVKYSPIASQNVVFSAGV 419

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +G  + + +     + +      +  +      P G++IA +      F I V       
Sbjct: 420 DGTIRAFDL-IRYRNFRTFVSPNKTQFSTLAIDPSGEIIAASSID--TFEIYVWSVRTG- 475

Query: 383 ERLLVEDSNLQAPT 396
            RL    S  ++P 
Sbjct: 476 -RLTDILSGHESPV 488


>gi|290995466|ref|XP_002680316.1| chromatin assembly factor-1 p105 subunit [Naegleria gruberi]
 gi|284093936|gb|EFC47572.1| chromatin assembly factor-1 p105 subunit [Naegleria gruberi]
          Length = 892

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 49/230 (21%), Positives = 84/230 (36%), Gaps = 33/230 (14%)

Query: 196 MDRDGANIRYLTPSRDQILFEPRFS------PNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           +  D  N R+LT S + I      S      P+      A  + E    V  + T  D  
Sbjct: 28  VHPD--NSRFLTCSDELINIWKATSYINSTKPSGDT---AITETELSSSVATIKTESDFC 82

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV---DLQSNATERLTN---TLFI 303
            ++IG         RFS +GK    +   D ++ +Y V   +    + +R+ +       
Sbjct: 83  IQKIG---GNTNCARFSPDGKFIA-ANSDDFSVSVYKVSKANTDKESWKRIKHFKTHTSD 138

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +S ++S DS  +   S  +    +Y M++ N  D    S D         + P G  + 
Sbjct: 139 VLSIAWSGDSRYLASCSI-DNSVVVYDMRAKNVGDIVLKSSDHNEFVKGVTFDPIGKYLV 197

Query: 363 FTKFSGEKFAIGVMKKDG--SQERLLVE-----DSNLQAPTWSPSGRSLI 405
               S     I  +  DG     + +       D  +  P++SP G+ LI
Sbjct: 198 --SQSDHSVFIWALN-DGVFQFHKRISNVFGKVDIAVYKPSFSPCGQFLI 244


>gi|255544179|ref|XP_002513152.1| WD-repeat protein, putative [Ricinus communis]
 gi|223548163|gb|EEF49655.1| WD-repeat protein, putative [Ricinus communis]
          Length = 578

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 55/148 (37%), Gaps = 17/148 (11%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDR 322
           FS NGK    S  KD++  I+ +        + T        ++ S+SPD SQ++     
Sbjct: 277 FSHNGKYLA-SSSKDQSAIIWEIKEDGIVALKHTLKGHRKPVLTVSWSPDDSQLLTCGQE 335

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           E    +     +  +   I +          W P G  I F   +    +I +   DG +
Sbjct: 336 E---VIRRWDVSSGECIHIHEKSGVGLVSCGWFPDGRGI-FAGMTDR--SICLWDLDGKE 389

Query: 383 -----ERLLVEDSNLQAPTWSPSGRSLI 405
                E+  +  S++     +  G+ +I
Sbjct: 390 LECWKEQKTLRISDM---AITDDGKKII 414


>gi|170691828|ref|ZP_02882992.1| 6-phosphogluconolactonase [Burkholderia graminis C4D1M]
 gi|170143112|gb|EDT11276.1| 6-phosphogluconolactonase [Burkholderia graminis C4D1M]
          Length = 430

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 44/333 (13%), Positives = 89/333 (26%), Gaps = 44/333 (13%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDR-------KQIIGKKFFSSPASWRKIAHTIS 159
           G   L+ G       + L V +R +D K          Q +   +       R +     
Sbjct: 66  GVYNLLVGTYTGGKSEGLYV-YR-FDTKTGDATRVSVAQTVNPSYLVVSRDRRFV----- 118

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNS-LCVMDRDGANIRYLTPSRDQ-ILFEP 217
                 + G+ G  + R    +    +   + + L  +  DG +  YL+ S D   L   
Sbjct: 119 -YAVNELPGDNGPASQRGGVSAFRFDAASGQLTFLNKVSADGNDPCYLSLSPDGKYLLAA 177

Query: 218 RFS----PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL 273
            +S    P           D  +    L        P +     + + +  FS +G    
Sbjct: 178 NYSVAADPGGSFSVLPVQADGQLGASVLTVHHEGSGPVKGRQDNAHVHSTVFSPDGHYLF 237

Query: 274 ISVQKDEAMDIYSVDLQS-NATERLTNTLFINISA-------SYSPDSSQIVFESDREGK 325
                 + +  Y             T+  +             +  D       S+    
Sbjct: 238 AQDLGADKLYSYRYTADGSRGLFSPTDWRYTQEKPGTGPRHLVFGADGKHAYLTSELAAT 297

Query: 326 EQLYVMQSNGSDQKRIS--------QDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVM 376
             +           ++                     SP G  +  T      +  I  +
Sbjct: 298 --VSTFNYADGKLTQVQTISLTEPGFKGAVGAAAIHLSPDGRFLYATNRGDANEIVIFSV 355

Query: 377 KKDGSQERLL-VEDSNLQAPT-WS--PSGRSLI 405
                  + +  + S  ++P  ++  P+G+ LI
Sbjct: 356 DPTNGHLKKIGRQSSLGKSPREFAIDPTGKWLI 388


>gi|167536964|ref|XP_001750152.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163771314|gb|EDQ84982.1| predicted protein [Monosiga brevicollis MX1]
          Length = 576

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 32/222 (14%), Positives = 68/222 (30%), Gaps = 13/222 (5%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
            K  L  +  D   +R       Q + +  F+ +  +     YD        L DT   +
Sbjct: 308 GKVKLWKVYDDRQVVRT-YLGHTQGVRDICFNRDGTRFVSCGYDR----YARLWDTETGQ 362

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISA 307
              R  N ++     +F  +  +  + V   +   I + D  +    +     L    + 
Sbjct: 363 CLGRFTNHKTP-YCVKFHPDEDKQNLFVVGTQDRKILTWDTNTQEIVQEYDRHLGAVNTV 421

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++  +  ++V  SD +   +++       D K I+     S       P G  +A     
Sbjct: 422 TFVENGKRMVTTSD-DKSLRVWEWDIPV-DIKYIADPNMHSMPSVALRPDGKWLACQSMD 479

Query: 368 GEKFAIGVMKKDGSQERLLVED----SNLQAPTWSPSGRSLI 405
            +        +     R   +            +SP G  ++
Sbjct: 480 NQVVIFSAQDRFRPNHRKAFKGHLTAGYACQVNFSPDGAYVM 521


>gi|170584530|ref|XP_001897052.1| Will die slowly protein [Brugia malayi]
 gi|158595587|gb|EDP34130.1| Will die slowly protein, putative [Brugia malayi]
          Length = 326

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 77/200 (38%), Gaps = 23/200 (11%)

Query: 165 SITGEKGDFNSRILFVSE--SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN 222
            I   +GD NSR ++ S+  S  +G    ++        +I+Y+     + +   +FS +
Sbjct: 42  KIESAQGDGNSRAIYDSQKTSTPNGTSTTNMPSAAVPNYDIKYILSGHTKAVSSVKFSAD 101

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAM 282
              +A ++ D      + + +T+  +  K I               G +  IS       
Sbjct: 102 GSLLASSSADK----TIKVWNTQDGKIEKTIT--------------GHKLGISDICSFDE 143

Query: 283 DIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
            +   D+++ +  + L        + S++ D + ++  S  +G  +++   +NG   K +
Sbjct: 144 SVRVWDVKTGSCIKTLPAHSDPVSAVSFNRDGT-LICSSSYDGLVRIWDT-ANGQCVKTL 201

Query: 342 SQDKEASYFDPVWSPQGDLI 361
             D         +SP G  I
Sbjct: 202 VDDDNPPVSFVKFSPNGKYI 221



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/157 (14%), Positives = 53/157 (33%), Gaps = 24/157 (15%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL-FINISASYSP 311
           +      + + +FS++G     S   D+ + +++        + +T     I+   S+  
Sbjct: 86  LSGHTKAVSSVKFSADGSLLA-SSSADKTIKVWNTQ-DGKIEKTITGHKLGISDICSFD- 142

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                         E + V         +             ++  G LI  + + G   
Sbjct: 143 --------------ESVRVWDVKTGSCIKTLPAHSDPVSAVSFNRDGTLICSSSYDG--- 185

Query: 372 AIGVMKKDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
            + +      Q  + LV+D N  +    +SP+G+ ++
Sbjct: 186 LVRIWDTANGQCVKTLVDDDNPPVSFVKFSPNGKYIL 222


>gi|75676655|ref|YP_319076.1| peptidase S9, prolyl oligopeptidase [Nitrobacter winogradskyi
           Nb-255]
 gi|74421525|gb|ABA05724.1| oligopeptidase B, Serine peptidase, MEROPS family S09A [Nitrobacter
           winogradskyi Nb-255]
          Length = 695

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 44/129 (34%), Gaps = 13/129 (10%)

Query: 304 NISASYSPDSSQIVFESDREGKEQ--LYVMQSNGSDQKRISQDKEASYFDPVW------- 354
           + S   SPD     F   REG +   +     +G D  R   D +A   +  +       
Sbjct: 86  DDSTVPSPDGPFAYFTKYREGGQHRMIGRQPRDGGDA-RFLIDGDALAENKKFFQLGEAD 144

Query: 355 -SPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
            SP   L A++      E F I +   D   +   V +       WS   R+  + +  D
Sbjct: 145 HSPDHRLEAWSCDDRGSEYFTIRIRDWDSGADLADVIEETDGGVVWSADSRAFYYVKLDD 204

Query: 412 GDTGSKLYS 420
                ++Y 
Sbjct: 205 NHRPMQVYR 213


>gi|47226095|emb|CAG04469.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 326

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 33/265 (12%), Positives = 84/265 (31%), Gaps = 29/265 (10%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           S    +G     +  ++ +  N         + +    F  + +   +     ED L   
Sbjct: 55  SMIAAAGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGR---WMYTGGEDCLARI 111

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
                 +   +++    + I       N    ++    D++  I+  DL+++  E+L   
Sbjct: 112 WDLRSRNLQCQKLFQVNAPINCVCLHPNQAELIV---GDQSGVIHIWDLKTDHNEQLIPE 168

Query: 301 LFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ--------DKEASYFD 351
             ++++A    PD+S +   +        YV    G   + ++Q                
Sbjct: 169 PEVSVNAVHIDPDASYMAAVNSSG---NCYVWNMAGGIGEEVTQLIPKTKIPAHNRYSLR 225

Query: 352 PVWSPQGDLIAFTK-------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
             +SP   L+A          +    F++       S          +    +S   + +
Sbjct: 226 CKFSPDSTLLATCSADQTCKIWRTSNFSLMTELSIKSNNPGETSRGWMWDCAFSGDSQYI 285

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNET 429
           + +     D  ++L+ ++  G  + 
Sbjct: 286 VTASS---DNLARLWCVE-TGEIKR 306


>gi|324997205|ref|ZP_08118317.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Pseudonocardia sp. P1]
          Length = 640

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 7/89 (7%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS-----QERLLV--EDSNLQAP 395
             +         SP G  IAF      +  + +   D +     + R +   E   +Q  
Sbjct: 12  FLRPPERTGASISPDGTRIAFLAPWKNRLNVWIEDLDPADGEVPEPRCVTADETRTVQDY 71

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
            W+   R +++ +   GD    +Y ID++
Sbjct: 72  RWTHDPRWMLYLQDDGGDENWHVYRIDVD 100



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 34/80 (42%), Gaps = 5/80 (6%)

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGS-----DQKRISQDKEASYFDPVWSPQGD 359
             AS SPD ++I F +  + +  +++   + +     + + ++ D+  +  D  W+    
Sbjct: 19  TGASISPDGTRIAFLAPWKNRLNVWIEDLDPADGEVPEPRCVTADETRTVQDYRWTHDPR 78

Query: 360 LIAFTKFSGEKFAIGVMKKD 379
            + + +  G      V + D
Sbjct: 79  WMLYLQDDGGDENWHVYRID 98


>gi|282878435|ref|ZP_06287221.1| phage tail component, N-terminal domain protein [Prevotella
           buccalis ATCC 35310]
 gi|281299421|gb|EFA91804.1| phage tail component, N-terminal domain protein [Prevotella
           buccalis ATCC 35310]
          Length = 816

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 38/283 (13%), Positives = 90/283 (31%), Gaps = 51/283 (18%)

Query: 165 SITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGA-----------NIRYLTPSRDQI 213
            +T E G  +  + ++S+   S  +   + V  + GA            +R LT  R   
Sbjct: 125 KLTLEPGSHDVVVKYLSKRGRSDTL--DIQVEPQKGALLSVGEGEKTFTLRSLTDRR--F 180

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRV-YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +     SP+ + +  A  D     +  Y    +  +    +        A  +  +    
Sbjct: 181 VTGVELSPDGKYLITAFRDVAHGGKTSYRWQVKELKTGHIVAT---RNEAVHWMPHSHEL 237

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ----- 327
             + Q   + ++ + D+++   + +   L    S   SP +  +V     EGK++     
Sbjct: 238 YWARQGKYSRELITSDVETGIEKVIATNL-PEGSFVLSPTADYLVVMQKNEGKKKDRDVY 296

Query: 328 -----------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF------- 363
                            L          + ++            +  G  + F       
Sbjct: 297 EITEPEDRQPGWRNRTSLLKFDLRTGLAQPLTF-GYHDVSLLDINNDGSKVLFMTTRTRL 355

Query: 364 TKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLI 405
           T      F++  +       + L+ +D  + +  +SP+G+ ++
Sbjct: 356 THRPTTLFSVFSLDVRTLKADTLVFDDGFIASAAFSPNGKEIV 398


>gi|301100744|ref|XP_002899461.1| WD repeat protein 35 [Phytophthora infestans T30-4]
 gi|262103769|gb|EEY61821.1| WD repeat protein 35 [Phytophthora infestans T30-4]
          Length = 2051

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 32/201 (15%), Positives = 65/201 (32%), Gaps = 30/201 (14%)

Query: 179 FVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           F   +         + V+ R       +      ++ + +++ + QK+  A  D   I+ 
Sbjct: 85  FKKLTTSDENGLIIVWVLHRGMWYEEMINNRNKSVVRDMKWTTDGQKICIAYEDGAVIVG 144

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
               +    +  K    F        +S +GK  L  V KD  + ++  D   N    LT
Sbjct: 145 SVDGNRLWGKEMKTQLAF------VEWSPDGKSLLF-VTKDGEVAVH--DGMGNKVSNLT 195

Query: 299 ------NTLFINI-----------SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
                      +                SP++  +   + R+GK Q+   + +   +  +
Sbjct: 196 LYAVESRGGGNDYKIIGVHWYDGIEGHISPEAPTLA-IAFRDGKVQITRGRFD---ENAV 251

Query: 342 SQDKEASYFDPVWSPQGDLIA 362
             D         W+  G +IA
Sbjct: 252 LIDTGMELTQVRWNNDGSVIA 272


>gi|25149045|ref|NP_741200.1| DIsplaced Gonad family member (dig-1) [Caenorhabditis elegans]
 gi|74961937|sp|Q09165|DIG1_CAEEL RecName: Full=Mesocentin; Flags: Precursor
 gi|22331940|gb|AAM78593.1| mesocentin [Caenorhabditis elegans]
 gi|26251538|gb|AAA50715.2| Displaced gonad protein 1, isoform a, confirmed by transcript evidence
             [Caenorhabditis elegans]
          Length = 13100

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 55/317 (17%), Positives = 92/317 (29%), Gaps = 51/317 (16%)

Query: 162   IYQSITGEKG---DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
             +  S+T   G     +S   F++ + +     +    +  DG   + L          P 
Sbjct: 11085 VVYSVTNPDGTPLATDSTGSFIASNGLIVEKDDEGKPIGPDG---QVLPTDASGNYIYPV 11141

Query: 219   FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
               P+ Q +                 T++              L P  S+NG    + + K
Sbjct: 11142 IGPDGQALPTDESGKPIYPVFTEDGTQLPTDSTGFAIGPDGELVPTDSANG----VPLSK 11197

Query: 279   DEAM------DIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE----GKEQL 328
             D +         Y +      T   T+     I     PD + +  +S       G + +
Sbjct: 11198 DGSPLPTDASGNYILPDSGVTTANPTDENGYAIYPITKPDGTLLATDSTGSYITQGGQLI 11257

Query: 329   YVMQSN---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
                 +    G D + +  D   +Y  PV  P G   A            V+  DGS   L
Sbjct: 11258 EKDNTGKPIGPDGQVLPTDGSGNYVYPVVGPDGQ--ALPTDDTGNVVYPVINADGS---L 11312

Query: 386   LVEDSNLQAPT--------------WSPSGRSLIFSRKKDGD-------TGSKLYSIDLN 424
             L  DS+    T               SP G+ L       G+           +   D N
Sbjct: 11313 LATDSSGSFITENGKIVAKDDEGKPISPDGQVL--PTDASGNYIYPALGPDGSILPTDSN 11370

Query: 425   GRNETLINTPAYASDPQ 441
             G++   +  P     P 
Sbjct: 11371 GKSIYPVRGPDGTPLPT 11387



 Score = 42.7 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 54/267 (20%), Positives = 81/267 (30%), Gaps = 41/267 (15%)

Query: 160   DDIYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFE 216
             D++  SIT   G     +S   FV+E        +    +  DG   + L          
Sbjct: 10576 DEVIVSITNPDGTLLGTDSTGAFVTEDGPIIENDDEGKPVGPDG---QVLPTDDSGNYIY 10632

Query: 217   PRFSPNQQ--------KVAYATYDD-EDILRVYLMDTRIDRAPKRI-GNFRSMILAPRFS 266
             P   P+ Q        K  Y         L        I    + I  +     L+   S
Sbjct: 10633 PVIGPDGQALPTDESGKTVYPIRGPDGTPLPTDASGASIGPDGEPIPTDASGKPLSKDGS 10692

Query: 267   S-----NGKRALISVQKDEAMDIYSVDLQSNATERLT----NTLFINISASYSPDSSQIV 317
                   +G   L+ V  D  +  +  D   N    +T      L  + S S+  D   I+
Sbjct: 10693 PLPTDNDGHYVLVPVD-DSTIKAFPTDESGNVAYPITRPDGTPLGTDSSGSFVTDDGTII 10751

Query: 318   FESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
              E+D EGK         G D + +  D   +Y  PV  P G   A       K    V  
Sbjct: 10752 -ENDDEGKPI-------GPDGQVLPTDASGNYIYPVIGPDGQ--ALPTDESGKTVYPVHG 10801

Query: 378   KDGSQERLLVEDSNLQAPTWSPSGRSL 404
              DG+        ++       P G  +
Sbjct: 10802 PDGTPL-----PTDASGAAIGPDGEPI 10823



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 40/287 (13%), Positives = 79/287 (27%), Gaps = 68/287 (23%)

Query: 174   NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
             +S   F++E+       +    +  DG   + L          P   P+   +   +   
Sbjct: 11316 DSSGSFITENGKIVAKDDEGKPISPDG---QVLPTDASGNYIYPALGPDGSILPTDSNGK 11372

Query: 234   EDILRVYLMDTRIDRAPKRIGNFRSMILAPR------------FSSNGKRALISVQKDEA 281
                    +   R         +     + P              S++G      +  D  
Sbjct: 11373 S------IYPVRGPDGTPLPTDEFGFAIGPDGKPIPTDTSGKPLSADGS----PLPTDNN 11422

Query: 282   MDIYSVDLQSNATERLTNTLFINISASYSPDSSQI------VFES--------DREGKEQ 327
              +   V  +       T+     I    +PD + +       F +        D +GK  
Sbjct: 11423 GNYILVLSEGVTEHAPTDENGNVIYPVTNPDGTPLGTDSSGAFITQDGTVVKKDEDGKPI 11482

Query: 328   LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
                    G D + +  D   +Y  PV  P G ++          ++     DG+Q     
Sbjct: 11483 -------GPDGQVLPTDNSGNYIYPVIGPDGQVLPTDASGKTVHSVY--GPDGTQL---- 11529

Query: 388   EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
               ++       P G               +L   D++GR  +   +P
Sbjct: 11530 -PTDASGSAIGPDG---------------ELVPTDVSGRPLSQDGSP 11560



 Score = 38.1 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/180 (13%), Positives = 47/180 (26%), Gaps = 26/180 (14%)

Query: 244   TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD---EAMDIYSVDLQSNAT----ER 296
               +     +  +    ++ P    +G             E   +  +D          + 
Sbjct: 11716 VLVSSGKSQPTDEHGNVIYPITKPDGTLLATDSTGSYLTEDGQLVEIDDSGKPLGSDGQV 11775

Query: 297   LT-NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-- 353
             L  +     I  +  PD       +D  G     ++  +G+     S     +    V  
Sbjct: 11776 LPIDASGNYIYPALGPDGQ--ALPTDDAGNLVYPIVYPDGTPLATESTGNYVTENGEVVG 11833

Query: 354   -------WSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED--SNLQAPTWSPSGRSL 404
                     SP G ++             +    G   ++L  D    L  P + P G  L
Sbjct: 11834 KNTDGKPISPDGQVLPTDASGN-----YIYPAVGPDGQVLPTDASGKLIYPVFHPDGTQL 11888



 Score = 37.7 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 66/225 (29%), Gaps = 37/225 (16%)

Query: 200  GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
            G N + L          P   P+ Q +      DE    VY +               + 
Sbjct: 4404 GPNGQILPTDASGNYIYPVIGPDGQALP----TDESGKTVYPVRGPDG------TPLPTD 4453

Query: 260  ILAPRFSSNGKRA-----LISVQKDEAM-------DIYSVDLQSNATERL-TNTLFINIS 306
                  S +G+        I + KD +        +   V  + + T+ L T+     I 
Sbjct: 4454 ASGAVISPDGEVIPTDANGIPLDKDGSPLPTDASGNYILVPSEQDITKTLPTDDSGNVIY 4513

Query: 307  ASYSPDSSQIVFESDRE---GKEQLYVMQSNGS----DQKRISQDKEASYFDPVWSPQGD 359
                PD + +  +S         ++     +G     D + +  D   +Y  PV  P G 
Sbjct: 4514 PITKPDGTSLATDSTGSFVTEGGEIVERDEDGKPLGPDGQVLPTDASGNYIYPVVGPDGQ 4573

Query: 360  LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
            ++         + +     DG     +   ++       P G  +
Sbjct: 4574 VLPTDDTGKTVYPVY--GPDG-----IPLSTDASGAVIGPDGEPI 4611



 Score = 36.9 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 42/243 (17%), Positives = 75/243 (30%), Gaps = 50/243 (20%)

Query: 159  SDDIYQSITGEKGDF---NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILF 215
            + +I   IT   G     +S   FV++        +    +  DG   + L         
Sbjct: 8524 AGNIIYPITKPDGTLLATDSTGSFVADDGQIIEKDDEGKPIGPDG---QVLPTDASGNYI 8580

Query: 216  EPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR----------- 264
             P   P+ Q +        D     +   R         +    ++ P            
Sbjct: 8581 YPVIGPDGQAL------PTDESGKTVYPVRGPDGTPLPTDASGAVIGPDGEPIPTDPSGK 8634

Query: 265  -FSSNGKRA--------LISVQKDEAMDIYSVDLQSNATERLT----NTLFINISASYSP 311
              S++G +         ++    +    +   D   N    +T      L  + S S+  
Sbjct: 8635 PLSADGSKLPTDINGNYVLVPADEVTTKVLPTDDSGNVVHPITRPDGTPLGTDASGSFIT 8694

Query: 312  DSSQIVFESDREGKEQL-------------YVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            +  QIV E + +GK                Y+  S GSD++ +  D   S   P+ SP G
Sbjct: 8695 EDGQIV-EKNDDGKPIGPDGQVLPTDSSDNYIYPSIGSDEQAMPTDTTGSVIYPLVSPDG 8753

Query: 359  DLI 361
             +I
Sbjct: 8754 TVI 8756


>gi|73977680|ref|XP_866531.1| PREDICTED: similar to apoptotic protease activating factor isoform
           d isoform 6 [Canis familiaris]
          Length = 1207

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 77/234 (32%), Gaps = 29/234 (12%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       ++   FS + Q++A    D      + +           I      +L  
Sbjct: 609 RLVVRPHTDAVYHACFSEDGQRIASCGVDK----TLQVFKAETGEKLLEIKAHEDEVLCC 664

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS++ +    +   D+ + I+  +  +     + +     ++  +  ++S  +  +   
Sbjct: 665 AFSTDDRFIA-TCSVDKKVKIW--NSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATAS 721

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L +   N  + +        S     +SP   L+A     G    + +     + E
Sbjct: 722 SDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGT---LKLWDVKSANE 778

Query: 384 R--LLVEDS--NLQAP-----------TWSPSGRSLIFSRKKDGDTGSKLYSID 422
           R  + V+    N + P           +WS  G  ++ + K        L+++D
Sbjct: 779 RKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNK----IFLWNMD 828


>gi|73977670|ref|XP_866463.1| PREDICTED: similar to apoptotic protease activating factor isoform
           b isoform 2 [Canis familiaris]
          Length = 1195

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 77/234 (32%), Gaps = 29/234 (12%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       ++   FS + Q++A    D      + +           I      +L  
Sbjct: 597 RLVVRPHTDAVYHACFSEDGQRIASCGVDK----TLQVFKAETGEKLLEIKAHEDEVLCC 652

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS++ +    +   D+ + I+  +  +     + +     ++  +  ++S  +  +   
Sbjct: 653 AFSTDDRFIA-TCSVDKKVKIW--NSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATAS 709

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L +   N  + +        S     +SP   L+A     G    + +     + E
Sbjct: 710 SDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGT---LKLWDVKSANE 766

Query: 384 R--LLVEDS--NLQAP-----------TWSPSGRSLIFSRKKDGDTGSKLYSID 422
           R  + V+    N + P           +WS  G  ++ + K        L+++D
Sbjct: 767 RKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNK----IFLWNMD 816


>gi|73977674|ref|XP_866491.1| PREDICTED: similar to apoptotic protease activating factor isoform
           d isoform 4 [Canis familiaris]
          Length = 1165

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 32/234 (13%), Positives = 77/234 (32%), Gaps = 29/234 (12%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       ++   FS + Q++A    D      + +           I      +L  
Sbjct: 609 RLVVRPHTDAVYHACFSEDGQRIASCGVDK----TLQVFKAETGEKLLEIKAHEDEVLCC 664

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS++ +    +   D+ + I+  +  +     + +     ++  +  ++S  +  +   
Sbjct: 665 AFSTDDRFIA-TCSVDKKVKIW--NSMTGGLVHVYDEHSEQVNCCHFTNNSHYLLLATAS 721

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L +   N  + +        S     +SP   L+A     G    + +     + E
Sbjct: 722 SDCFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGT---LKLWDVKSANE 778

Query: 384 R--LLVEDS--NLQAP-----------TWSPSGRSLIFSRKKDGDTGSKLYSID 422
           R  + V+    N + P           +WS  G  ++ + K        L+++D
Sbjct: 779 RKSINVKQFFLNSEEPQEDMEVIVKCCSWSADGTRIMVAAKNK----IFLWNMD 828


>gi|54024438|ref|YP_118680.1| hypothetical protein nfa24690 [Nocardia farcinica IFM 10152]
 gi|54015946|dbj|BAD57316.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 364

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 83/232 (35%), Gaps = 34/232 (14%)

Query: 223 QQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK---D 279
              +AY     E    V ++DT  D+   RI    +   A   + +G++  +        
Sbjct: 32  GADIAYVPVMGEGA--VLVVDTAADQVRARIDGVGAQAAAVAAARDGRQLYVQSANPPFT 89

Query: 280 EAMDIYSVDLQSNATERLTNTLFIN--ISASYSPDSSQI-VFESDREGKEQLYVMQSNGS 336
              DI  VD  SN           +        P   ++ VF +    +  + V+ +  +
Sbjct: 90  GPDDIAVVDRTSNTVTARIPISGTDGMTEPIADPVRDRVYVFTA----RPSIDVLDTVSN 145

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQ 393
              R S    A  F    SP G  + +T F+       V   +      ER+ ++ S   
Sbjct: 146 TLVR-SMPLPAIPFAAAISPDGGKL-YTVFADST--AAVFDPETGFQVGERIQIDGSLPA 201

Query: 394 APTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
           +   SP GR              KLY++++ G N ++I+T ++      + F
Sbjct: 202 SAAVSPDGR--------------KLYTLNVLGDNVSVIDTQSWTRLGA-IAF 238



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 35/233 (15%), Positives = 79/233 (33%), Gaps = 10/233 (4%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIR-YLTPSRDQILFEPRFSPNQQKVAYATYD 232
           + R L+V  +       + + V+DR    +   +  S    + EP   P + +V   T  
Sbjct: 75  DGRQLYVQSANPPFTGPDDIAVVDRTSNTVTARIPISGTDGMTEPIADPVRDRVYVFTAR 134

Query: 233 DEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSN 292
               +   + +T +   P       ++  A   S +G +   +V  D    ++  +    
Sbjct: 135 PSIDVLDTVSNTLVRSMP-----LPAIPFAAAISPDGGKL-YTVFADSTAAVFDPETGFQ 188

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
             ER+     +  SA+ SPD  ++ +  +  G     +   + +    I+    ++    
Sbjct: 189 VGERIQIDGSLPASAAVSPDGRKL-YTLNVLGDNVSVIDTQSWTRLGAIAFAPGSAPVAG 247

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             SP G  +          A+ V+     +    V      +  ++  G  + 
Sbjct: 248 AISPDGTQLMVATL--GADAVQVIDLAADRVTRTVPVDAPLSVGFTADGAKMY 298


>gi|21218854|ref|NP_624633.1| hypothetical protein SCO0305 [Streptomyces coelicolor A3(2)]
 gi|5881863|emb|CAB55662.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
          Length = 959

 Score = 44.6 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 41/287 (14%), Positives = 92/287 (32%), Gaps = 32/287 (11%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           RL+DV   +Q    +   +P +  +    ++ ++Y +        + R+L    +  +  
Sbjct: 340 RLYDVPSARQSRVVRAEGTPRALSRDGRVLAMEVYLNRVQLWDTRSGRLLSTMATGHT-- 397

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                        N+ ++      +      SP+ + VA + Y  E      +      R
Sbjct: 398 ------------ENLPHVGHGLHALAL----SPDGRWVAASHYTPEGEAFAVVWRASDGR 441

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFINISA 307
              R+    + +    FS++G R  +  Q    +  +  D  +  A   L         A
Sbjct: 442 EITRVPVSDARVGL-GFSADGSRLTLVDQDRREVREFRTDSARWEAARSLPGMPGSTAEA 500

Query: 308 -SYSP----DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
             YS     D ++       E + +++    +   ++RI+      Y D   +    +  
Sbjct: 501 LRYSEVLLFDGARKALTRTSE-RAEVW----DLEQRRRIAVRSLGPYEDMTVADDKGIFL 555

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
                G         + G+    L   ++  A   S  G  ++ +  
Sbjct: 556 LGGQDGTVRLYDAALRPGTTLGRLTRPASTIA--MSADGTQVVVASY 600



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 51/157 (32%), Gaps = 28/157 (17%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S D +   + S  +    + +     + Q R+ + +         S  G ++A   +   
Sbjct: 321 SGDGTTAAYRSVFDDDRAVRLYDVPSARQSRVVRAEGTPR---ALSRDGRVLAMEVYLNR 377

Query: 370 KFAIGVMKKDGSQERLLVE------------DSNLQAPTWSPSGRSLIFSRKK-DGDTGS 416
                V   D    RLL                 L A   SP GR +  S    +G+  +
Sbjct: 378 -----VQLWDTRSGRLLSTMATGHTENLPHVGHGLHALALSPDGRWVAASHYTPEGEAFA 432

Query: 417 KLYSIDLNGRNETLINTP------AYASDPQWVGFMD 447
            ++    +GR  T +          +++D   +  +D
Sbjct: 433 VVWRAS-DGREITRVPVSDARVGLGFSADGSRLTLVD 468



 Score = 37.3 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 66/187 (35%), Gaps = 19/187 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL-APRFSSNGKRALISV 276
            FSP ++     ++   D   V   +  ++    R     ++   + RF+ +G R  + +
Sbjct: 716 SFSPIRR--PGLSFLPGDRYVVGEWNGAVELLDTRTCTRSTVTEDSGRFALSGDRRTLVL 773

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISA---SYSPDSSQIVFESDREGKEQLYVMQS 333
             D+ +D +  D           TL         S   +  Q  F SDRE    +YV++ 
Sbjct: 774 LNDDGVDTWRWDGDHAFARAARTTLPSEAHPVDMSVDHEGRQAAF-SDRE--SHVYVVRL 830

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQ 393
           +  ++ R +           +S  G L+         F  G M +     R+L   S  Q
Sbjct: 831 DSGERVRATGYLPDKTDAVAFSRDGRLL---------FQ-GFMTESTRGVRVLDAGSGDQ 880

Query: 394 APTWSPS 400
              W+  
Sbjct: 881 LDIWTTD 887


>gi|261880914|ref|ZP_06007341.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
 gi|270332426|gb|EFA43212.1| conserved hypothetical protein [Prevotella bergensis DSM 17361]
          Length = 876

 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 21/177 (11%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSS 314
           + + +L    SS+G+ A   +Q D   D   V    N      +  F + S   +S D  
Sbjct: 33  YWNKLLGFDLSSDGQWAYWRMQYDSNTDSLFVQHTENNR----HYKFASASMPEFSKDGQ 88

Query: 315 QIVFE------SDRE-GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            I F       +D+     Q+ ++      +K  S  +  S+ +                
Sbjct: 89  WIAFSEPTPDGADKGQASYQITLLNLRSGIKKTFSGVERFSFVE-----NTKFFLLLSSK 143

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF-SRKKDGDTGSKLYSIDL 423
           G    + +   +    +LL   + +    +SP GR L +     + +  S++  +DL
Sbjct: 144 GRTSDVTLYHLETLTSKLL---NGVNDYCFSPDGRYLAYLMSTPESEVSSQMEVLDL 197


>gi|238498402|ref|XP_002380436.1| WD-repeat protein, putative [Aspergillus flavus NRRL3357]
 gi|220693710|gb|EED50055.1| WD-repeat protein, putative [Aspergillus flavus NRRL3357]
          Length = 548

 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 47/247 (19%), Positives = 81/247 (32%), Gaps = 19/247 (7%)

Query: 164 QSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQ 223
           +S   E        +  S +      K+   +   D  + R L    D+       SP+ 
Sbjct: 63  RSTFLESASSAVTFVVFSSNGEKLAAKSHGEIKAWDLVSERLLLEIPDERSEIVSISPDC 122

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           + +A       + L V + D           + R  +    FS  G   L+    D  ++
Sbjct: 123 RFIASW-----NNLAVIVWDVSQRAVLH--THERRGVHTIEFSPEGN--LLIASNDGTVE 173

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG----SDQK 339
           ++  D   N     TN  + ++ A +SPDS  IV  S      Q+ V         S+  
Sbjct: 174 LW--DCTENILRSYTNIGYKSLVAGFSPDSKNIVSLST---NGQINVWDWTTNEFKSNIH 228

Query: 340 RISQDKEASYFDPVWS-PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
            IS   + S +    S P+   +A +  +     I         E        + A  +S
Sbjct: 229 HISDSVDYSLYCGKVSFPRFGELAASLVADGPEDIWTFIPGVLTEIYRFSGRMMDALAFS 288

Query: 399 PSGRSLI 405
           P G  + 
Sbjct: 289 PDGEIIA 295



 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 54/307 (17%), Positives = 105/307 (34%), Gaps = 34/307 (11%)

Query: 127 EFRLWDVKDRKQIIGKK---------FFSSPASWRKIAH---TISDDIYQSITGEKGDFN 174
             RLW+    +    +          F S+       +H      D + + +  E  D  
Sbjct: 53  SVRLWNTHTGRSTFLESASSAVTFVVFSSNGEKLAAKSHGEIKAWDLVSERLLLEIPDER 112

Query: 175 SRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE 234
           S I+ +S         N+L V+  D +    L     + +    FSP    +        
Sbjct: 113 SEIVSISPDCRFIASWNNLAVIVWDVSQRAVLHTHERRGVHTIEFSPEGNLLI-----AS 167

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +   V L D   +   +   N     L   FS + K  + S+  +  ++++  D  +N  
Sbjct: 168 NDGTVELWDC-TENILRSYTNIGYKSLVAGFSPDSKNIV-SLSTNGQINVW--DWTTNEF 223

Query: 295 ERLTNTLFINISASYS--------PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           +  +N   I+ S  YS        P   ++      +G E ++           I +   
Sbjct: 224 K--SNIHHISDSVDYSLYCGKVSFPRFGELAASLVADGPEDIWTFIP--GVLTEIYRFSG 279

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIF 406
                  +SP G++IA +    E+  I       S+    + +  +   +++P+G  +  
Sbjct: 280 RMMDALAFSPDGEIIAASACWTEEITIWNGSSKVSEALGDIHEDTITGLSFAPNGTVVA- 338

Query: 407 SRKKDGD 413
           S  KDG 
Sbjct: 339 SAAKDGT 345



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 29/182 (15%), Positives = 62/182 (34%), Gaps = 22/182 (12%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L DT      K   + +  I    FS + K+   +V +  ++ ++  +  +  +  L + 
Sbjct: 15  LWDTSTWVCVKSFED-QGNIRDAAFSPDSKQLA-TVSEAGSVRLW--NTHTGRSTFLESA 70

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                   +S +  ++  +S      ++         ++ + +  +        SP    
Sbjct: 71  SSAVTFVVFSSNGEKLAAKS----HGEIKAWDLV--SERLLLEIPDERSEIVSISPDCRF 124

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL--VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           IA          + V+  D SQ  +L   E   +    +SP G  LI       D   +L
Sbjct: 125 IASWN------NLAVIVWDVSQRAVLHTHERRGVHTIEFSPEGNLLI----ASNDGTVEL 174

Query: 419 YS 420
           + 
Sbjct: 175 WD 176


>gi|237832721|ref|XP_002365658.1| WD-repeat membrane protein, putative [Toxoplasma gondii ME49]
 gi|211963322|gb|EEA98517.1| WD-repeat membrane protein, putative [Toxoplasma gondii ME49]
          Length = 1127

 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 35/90 (38%), Gaps = 6/90 (6%)

Query: 338 QKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
           ++R+            V SP   L+A +   G  F + +     +  R + ++    AP+
Sbjct: 693 ERRLQLPTSRGPIASFVVSPNSSLLAVSTQEGAVFLVDI--LSHTVIRTIYKEGAPAAPS 750

Query: 397 ---WSPSGRSLIFSRKKDGDTGSKLYSIDL 423
              +SP  R L  + +     G  LY  D+
Sbjct: 751 AIAFSPDARWLAVASRPGASQGPTLYIYDI 780


>gi|260828211|ref|XP_002609057.1| hypothetical protein BRAFLDRAFT_128129 [Branchiostoma floridae]
 gi|229294411|gb|EEN65067.1| hypothetical protein BRAFLDRAFT_128129 [Branchiostoma floridae]
          Length = 330

 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 34/213 (15%), Positives = 71/213 (33%), Gaps = 25/213 (11%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R    S DQ+ + P  SP+                + + D R  +    + N +   +
Sbjct: 73  NFRGHGDSVDQLCWHPS-SPD------LLVTASGDKTIRIWDARAAKCAATV-NTKGENI 124

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +G+   +  ++D    I +   +S A E+     F     S++ D+        
Sbjct: 125 NICWSPDGQTIAVGNKEDLVTFIDARSHRSKAEEQ---FKFEVNEISWNNDNDLFFLT-- 179

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DG 380
             G   + ++      Q +      A+     + P G   A            ++   D 
Sbjct: 180 -NGHGCINILSYPELKQLQTLSAHSANCICIKFDPTGKYFATGSVD------ALVSLWDV 232

Query: 381 SQERLLVEDSNLQAP----TWSPSGRSLIFSRK 409
           ++   +   S L  P    ++S  G+ L  + +
Sbjct: 233 AELVCVRTFSRLDWPVRTLSFSHDGQMLASASE 265



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 46/126 (36%), Gaps = 7/126 (5%)

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--SNATERLTNTLF 302
           + +   K      S + +  +S +G+R   S   D+ + ++ +D    S       +   
Sbjct: 22  KSNGRTKDFSAHSSKVHSVAWSCDGRRLA-SGSFDKTVTVFLLDRDRLSRENNFRGHGDS 80

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
           ++    + P S  ++  +   G + + +  +  +     + + +    +  WSP G  IA
Sbjct: 81  VD-QLCWHPSSPDLLVTA--SGDKTIRIWDARAAKCAA-TVNTKGENINICWSPDGQTIA 136

Query: 363 FTKFSG 368
                 
Sbjct: 137 VGNKED 142



 Score = 40.4 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 64/189 (33%), Gaps = 11/189 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +S + +++A  ++D    + V+L+D                +    +  +    L++  
Sbjct: 41  AWSCDGRRLASGSFD--KTVTVFLLDRDRLSRENNFRGHGDSVDQLCWHPSSPDLLVTAS 98

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D+ + I+       A     NT   NI+  +SPD   I   +  +    +         
Sbjct: 99  GDKTIRIWDARAAKCAATV--NTKGENINICWSPDGQTIAVGNKEDLVTFIDARSHRSKA 156

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV-EDSNLQAPT 396
           +++   +      +  W+   DL  F         I +   +  Q + L    +N     
Sbjct: 157 EEQFKFE----VNEISWNNDNDLF-FLTNGHGCINI-LSYPELKQLQTLSAHSANCICIK 210

Query: 397 WSPSGRSLI 405
           + P+G+   
Sbjct: 211 FDPTGKYFA 219


>gi|255539885|ref|XP_002511007.1| WD-repeat protein, putative [Ricinus communis]
 gi|223550122|gb|EEF51609.1| WD-repeat protein, putative [Ricinus communis]
          Length = 458

 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 24/187 (12%), Positives = 55/187 (29%), Gaps = 6/187 (3%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV 287
           Y          +            +I    + I   R+S + +  L +      + ++S+
Sbjct: 61  YILCGLHKRPMIQAWSLTQPEWTCKIDEGPAGIAYARWSPDSRHILTTSDFQLRLTVWSL 120

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
              +    +           S++ D       + R+ K+ + ++     +          
Sbjct: 121 VNTACVHVQWPKHAS--KGLSFTKDGKFAAICTRRDCKDYINLLSCYTWEIMGTFAVDTL 178

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAPTWSPSGRSL 404
              D  WSP  D       S  ++ + +   DG    + +       ++  +WSP G  L
Sbjct: 179 DLADIEWSPD-DSAVVVWDSPLEYKVLIYSPDGRCLFKYQAYESGLGVKCVSWSPCGHFL 237

Query: 405 IFSRKKD 411
                  
Sbjct: 238 AVGSYDQ 244



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 13/155 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+SP+ + +   +      LR+ +           +   +       F+ +GK A I  +
Sbjct: 97  RWSPDSRHILTTSDFQ---LRLTVWSLVNTACVH-VQWPKHASKGLSFTKDGKFAAICTR 152

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI----SASYSPDSSQIVFESDREGKEQLYVMQS 333
           +D    I   +L S  T  +  T  ++        +SPD S +V   D   + ++ +   
Sbjct: 153 RDCKDYI---NLLSCYTWEIMGTFAVDTLDLADIEWSPDDSAVV-VWDSPLEYKVLIYSP 208

Query: 334 NGSDQ-KRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           +G    K  + +         WSP G  +A   + 
Sbjct: 209 DGRCLFKYQAYESGLGVKCVSWSPCGHFLAVGSYD 243


>gi|164655237|ref|XP_001728749.1| hypothetical protein MGL_4084 [Malassezia globosa CBS 7966]
 gi|159102633|gb|EDP41535.1| hypothetical protein MGL_4084 [Malassezia globosa CBS 7966]
          Length = 825

 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 33/241 (13%), Positives = 70/241 (29%), Gaps = 39/241 (16%)

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRI---GNFRSMILAP 263
            S+   ++     P+  ++A    D +  I     +     +AP+ +         +LA 
Sbjct: 17  RSKRTTIYSLSVHPDGTRLATGGLDTKIQIWATAPIQDEDVQAPRLLCTLARHTGAVLAV 76

Query: 264 RFSSNGKRALISVQKDEAMDIY------SVDLQSNAT-------------------ERLT 298
           R+S NG+    S   D    I+      + D  +  +                    RL 
Sbjct: 77  RWSHNGRYLA-SGSDDTVALIWELVETNTADAGTGTSTAMSTGFGSEANVEYWRPCRRLP 135

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                    ++S   + +      +    ++    +  D+ R  +          + P  
Sbjct: 136 GHTSDVTDVAWSETDAYLA-TVGLDSLVMIWSAN-DSFDRIRTIRGHHGFVKGVAFDPID 193

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLL------VEDSNLQAPTWSPSGRSLIFSRKKDG 412
             +A T        I      G +  +          +     +WSP G  L+ +   +G
Sbjct: 194 QFLA-TSSDDRTVKIWRTSDWGLEASVTEPFKGSPSSTFFHRLSWSPDGSHLLTANAMNG 252

Query: 413 D 413
            
Sbjct: 253 P 253


>gi|116686403|ref|YP_839650.1| 3-carboxymuconate cyclase-like protein [Burkholderia cenocepacia
           HI2424]
 gi|116652118|gb|ABK12757.1| 3-carboxymuconate cyclase-like protein [Burkholderia cenocepacia
           HI2424]
          Length = 363

 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 75/231 (32%), Gaps = 36/231 (15%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +  A+Y    +    +    +    ++      M  A R S +G+ A  SV   +A
Sbjct: 117 SGRYLFSASYGGNLLAVNRIGADGVAGDVRQTVKTGPMAHAIRQSPDGRYAFASVLGADA 176

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYS-PD---SSQIVFESDR---------EGKEQL 328
                 D  +            + + +Y  PD       VF S+          +GK  +
Sbjct: 177 WLRLPFDASTGILT-------DDTTPAYRLPDKSGPRHFVFSSNGRFAYLIDELDGKLHV 229

Query: 329 YVM---QSNGSDQKRISQDKEASYFDPVW------SPQGDLIAFTKFSGEKFAIGVMKKD 379
             +    ++    + +S      + D  W      +P G  +  ++ +    A   +   
Sbjct: 230 LALSHGDADARPIQTVSILPPDFHGDKPWGADLHLTPDGRFLYASERTSSTLAGYRVDAT 289

Query: 380 GSQERLLVEDSNLQAPT-WS--PSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +   +   +  Q P  ++  PSG+ L+      G     L    ++G  
Sbjct: 290 SGRLARIGTFATEQQPRGFAIDPSGKYLL----AAGQLSPTLAVYRIDGHT 336


>gi|104783009|ref|YP_609507.1| S9family peptidase [Pseudomonas entomophila L48]
 gi|95111996|emb|CAK16723.1| putative peptidase, S9 family [Pseudomonas entomophila L48]
          Length = 680

 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 35/278 (12%), Positives = 79/278 (28%), Gaps = 45/278 (16%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           I ++       +   + +   +      ++  C    D +N   +  SR+++L +P    
Sbjct: 63  IQETDLSLPSPWGPYLYYTRTTAGDEYPRHYRCPRPADDSN--TVDESREELLLDPNALA 120

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV--QKD 279
           N   +A   ++                                 S + +    S+    D
Sbjct: 121 NGGFLALGAFN--------------------------------VSPDHRLLAYSLDTSGD 148

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--SDREGKEQLYVMQSNGSD 337
           E   +Y  DL S A   L      + S +++ DS  + F    D     +L       + 
Sbjct: 149 EVYTLYVKDLASGALTTLPFD-DCDGSMTWANDSQTLFFTELDDTHRPWRLRRHTLGETG 207

Query: 338 QKRISQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
              + ++ +  +F   + +     +     S       V+     Q       + ++   
Sbjct: 208 ASTVFEEPDGRFFLHCYRASSERQLVLLLNSKTTSEAWVLDAATPQAAFTCLAARVEGHE 267

Query: 397 WSP-----SGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
           + P      G+   F R         L+    +     
Sbjct: 268 YYPDHGQLDGQWRWFIRSNQDGINFALFQAPADSVPAR 305


>gi|327295971|ref|XP_003232680.1| WD repeat protein [Trichophyton rubrum CBS 118892]
 gi|326464991|gb|EGD90444.1| WD repeat protein [Trichophyton rubrum CBS 118892]
          Length = 515

 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 8/100 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A A++D+     V L + R  +    +      +    FS++  R L+S  
Sbjct: 409 TFSPDGIYIASASFDN----HVKLWNARDGKFIFSLRGHVGPVYQCCFSAD-SRLLVSSS 463

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQI 316
           KD  + I+  D+++      L        +  +SPD  ++
Sbjct: 464 KDTTLKIW--DVRTGKLTMDLPGHQDEVYAVDWSPDGERV 501



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 39/131 (29%), Gaps = 6/131 (4%)

Query: 232 DDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L D      P  R+   +  +    FS +G     S   D  + +++    
Sbjct: 376 SASDDFTMFLWDPEASSKPVARMLGHQKEVNHVTFSPDGIYIA-SASFDNHVKLWNA-RD 433

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 L   +       +S DS  +V  S       L +               +   +
Sbjct: 434 GKFIFSLRGHVGPVYQCCFSADSRLLVSSSK---DTTLKIWDVRTGKLTMDLPGHQDEVY 490

Query: 351 DPVWSPQGDLI 361
              WSP G+ +
Sbjct: 491 AVDWSPDGERV 501



 Score = 41.5 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 39/132 (29%), Gaps = 4/132 (3%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++  +  S    R+          ++SPD   I   S       + +  
Sbjct: 374 LVSASDDFTMFLWDPEASSKPVARMLGHQKEVNHVTFSPDGIYIASASF---DNHVKLWN 430

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +         +      +   +S    L+  +        I  ++       L      +
Sbjct: 431 ARDGKFIFSLRGHVGPVYQCCFSADSRLLV-SSSKDTTLKIWDVRTGKLTMDLPGHQDEV 489

Query: 393 QAPTWSPSGRSL 404
            A  WSP G  +
Sbjct: 490 YAVDWSPDGERV 501


>gi|258406465|ref|YP_003199207.1| WD40 repeat, subgroup [Desulfohalobium retbaense DSM 5692]
 gi|257798692|gb|ACV69629.1| WD40 repeat, subgroup [Desulfohalobium retbaense DSM 5692]
          Length = 512

 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 44/300 (14%), Positives = 86/300 (28%), Gaps = 50/300 (16%)

Query: 168 GEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVA 227
            EK  +   +    E+V +G    ++                  + +     SP+  ++ 
Sbjct: 44  HEKNIYALAVAPDGETVYTGSRDKTIKAWSVPQGKHLATFKGHQRQVNALAASPDGTRLV 103

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI------------- 274
            A YD   ILR++ +         RI       L   F   G+  L+             
Sbjct: 104 SAGYD--SILRLWQLPEGKQVRETRIKGAYDFDL--DFDRRGRFVLVRAGRDLQLYSSPD 159

Query: 275 -----SVQKDEAMDIYSVDLQSNAT------ERLTNTLFINISA---------------S 308
                S   D+  +   +             +RL +   I   A               +
Sbjct: 160 LELQRSFDSDQGPEATVLGADGTLAVAAMTGKRL-HAWDIETGALRLDSDAAPGRAAAVA 218

Query: 309 YSPDSSQIVF-----ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            SPD   + +        ++    +++ +    +  R  +    +     ++P G  +  
Sbjct: 219 ASPDGRLVAWGTQAHVRSQKRSPTVWIWEPGQGETVRPLEAMTLTAQALAFTPDGKAVLA 278

Query: 364 TKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                    +  +   G    L   ED NL+    +P GR  +   K        L S+D
Sbjct: 279 GSNRHGDGVLLAVDGSGVLATLTGREDDNLEDVAVTPDGRYALAGTKNGALVIWDLASVD 338



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/161 (14%), Positives = 54/161 (33%), Gaps = 6/161 (3%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
           ++ +S   ++G   + +       V+ +    L   D +   +R  + +          S
Sbjct: 161 ELQRSFDSDQGPEATVLGADGTLAVAAMTGKRLHAWDIETGALRLDSDAAPGRAAAVAAS 220

Query: 221 PNQQKVAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV 276
           P+ + VA+         +    V++ +       + +        A  F+ +GK  L   
Sbjct: 221 PDGRLVAWGTQAHVRSQKRSPTVWIWEPGQGETVRPLEAMTLTAQALAFTPDGKAVLAGS 280

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQI 316
            +     + +VD  S     LT     N+   + +PD    
Sbjct: 281 NRHGDGVLLAVD-GSGVLATLTGREDDNLEDVAVTPDGRYA 320


>gi|226475566|emb|CAX77832.1| Guanine nucleotide-binding protein subunit beta 2-like 1
           [Schistosoma japonicum]
          Length = 314

 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 59/164 (35%), Gaps = 12/164 (7%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           L D     + +R       +L+  FS++ ++ + S  +D+   ++  +   +     T  
Sbjct: 89  LYDLEKGISTRRFCGHEGDVLSVAFSADNRQIV-SGSRDKTTRLW--NTLGHCKYVFTKG 145

Query: 301 LFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              +   S  +SP++ + +  +     + + V   +G   + +             SP G
Sbjct: 146 GHTDWVSSVRFSPNTDRPIVVTC-GWDKLVKVWGLSGCSLRTVHYGHTGYLNTVTVSPDG 204

Query: 359 DLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
            L A     G+   + + + K        L     + A  +SP+
Sbjct: 205 SLCASGGKDGQAMLWDLALNKF----LYTLPSGGIINALCFSPN 244


>gi|116793583|gb|ABK26798.1| unknown [Picea sitchensis]
 gi|224286069|gb|ACN40746.1| unknown [Picea sitchensis]
 gi|224286410|gb|ACN40912.1| unknown [Picea sitchensis]
          Length = 316

 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/204 (14%), Positives = 61/204 (29%), Gaps = 18/204 (8%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R         + +   S + Q     ++D E    + L D       +R       +L+
Sbjct: 55  PRRRLTGHSHFVQDVVISSDGQFALSGSWDSE----LRLWDLNTGLTTRRFVGHTKDVLS 110

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY------SPDSSQI 316
             FS + ++ + S  +D  + ++     +    + T        +++      SP ++  
Sbjct: 111 VAFSIDNRQIV-SASRDRTIKLW----NTLGECKYTIQPDAEGHSNWISCVRFSPSATNP 165

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
              S       + V        +               SP G L A     G      + 
Sbjct: 166 TIVSC-SWDRTVKVWNLTNCKLRNTLVGHGGYVNTAAVSPDGSLCASGGKDGVTMLWDL- 223

Query: 377 KKDGSQERLLVEDSNLQAPTWSPS 400
             +G +   L     + A  +SP+
Sbjct: 224 -AEGKRLYSLDAGDIIYALCFSPN 246



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 38/261 (14%), Positives = 83/261 (31%), Gaps = 36/261 (13%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                 E RLWD+     +  ++F         +A +I               ++R +  
Sbjct: 80  SGSWDSELRLWDLNTG--LTTRRFVGHTKDVLSVAFSI---------------DNRQIVS 122

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +    +  + N+L         I+         +   RFSP+       +   +  ++V+
Sbjct: 123 ASRDRTIKLWNTLGECKYT---IQPDAEGHSNWISCVRFSPSATNPTIVSCSWDRTVKVW 179

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +     R    +      +     S +G     S  KD    ++ +  +      L + 
Sbjct: 180 NLTNCKLRNT--LVGHGGYVNTAAVSPDGSLCA-SGGKDGVTMLWDL-AEGKRLYSL-DA 234

Query: 301 LFINISASYSPD-------SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV 353
             I  +  +SP+       + Q V   D E K  +  ++ +    K   + +        
Sbjct: 235 GDIIYALCFSPNRYWLCAATQQCVKIWDLESKSIVADLRPDFIPNK---KAQIPYCTSLS 291

Query: 354 WSPQGDLIAFTKFSGEKFAIG 374
           WS  G  + F+ ++  K  + 
Sbjct: 292 WSADGSTL-FSGYTDGKIRVW 311


>gi|157127663|ref|XP_001655027.1| wd-repeat protein [Aedes aegypti]
 gi|108872846|gb|EAT37071.1| wd-repeat protein [Aedes aegypti]
          Length = 509

 Score = 44.6 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 23/179 (12%), Positives = 62/179 (34%), Gaps = 22/179 (12%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---------ISA 307
           +S +    FS +G+  + +   D  ++++  +  +    +       +         ++ 
Sbjct: 214 KSHVECALFSPDGQYLV-TGSVDGFIEVW--NFTTGKIRKDLKYQAQDNFMMMEQAVLAM 270

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           S+S DS  +     ++G+ +++ +   G   +R  +          +S     I    F 
Sbjct: 271 SFSRDSEMLA-TGSQDGQIKVWKL-LTGQCLRRFEKAHSKGVTCLQFSRDNSQILTASFD 328

Query: 368 GEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
                I +      +         S +    +SP G +++ +     D   K++S+   
Sbjct: 329 ---HLIRLYGLKSGKMLKEFRGHTSFVNEAVFSPDGHNVLSASS---DGSVKIWSLKTT 381



 Score = 40.8 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 64/181 (35%), Gaps = 13/181 (7%)

Query: 186 SGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           +G     + V     G  +R    +  + +   +FS +  ++  A++D      + L   
Sbjct: 281 TGSQDGQIKVWKLLTGQCLRRFEKAHSKGVTCLQFSRDNSQILTASFDH----LIRLYGL 336

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS--NATERLTNTLF 302
           +  +  K      S +    FS +G   L S   D ++ I+S+      +  + L + L 
Sbjct: 337 KSGKMLKEFRGHTSFVNEAVFSPDGHNVL-SASSDGSVKIWSLKTTECLSTFKALGSDLA 395

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE--ASYFDPVWSPQGDL 360
           +N       +    V          + +M   G   +  S  K    ++     SP+G+ 
Sbjct: 396 VNSVLMLPKNPEHFVVC---NRSNTVVIMNMQGQIVRSFSSGKREGGAFICATISPRGEF 452

Query: 361 I 361
           I
Sbjct: 453 I 453


>gi|300790659|ref|YP_003770950.1| peptide hydrolase [Amycolatopsis mediterranei U32]
 gi|299800173|gb|ADJ50548.1| peptide hydrolase [Amycolatopsis mediterranei U32]
          Length = 616

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/211 (14%), Positives = 66/211 (31%), Gaps = 12/211 (5%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSP---NQQKVAYA 229
           +  ++ +S S        +L V+  DG                   FSP   +Q+ +   
Sbjct: 181 DESLIAISHSEHGDSRHPALRVLATDGFGTVAEKWDGAGKALSALEFSPLPGDQRLL--V 238

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
            ++      + + D R D   +   +    ++A  +  + +  L+    +    +Y  +L
Sbjct: 239 LHERRGREELLVWDVRADTETEIELDLPGEVVA-GWYPDARALLVVQFHEGRSSLYRYEL 297

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
            +     L         A   PD +     S       +    S+G+D   +    E + 
Sbjct: 298 DTAELSSLDTPAGRIGGAGVRPDGTVEYSWSSAAEPPAVRARTSDGTDSILLEPPGERAP 357

Query: 350 FDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                +      AF +  G +    V +  G
Sbjct: 358 GSEPVTH-----AFVEGVGGRIHALVSRPSG 383



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 33/255 (12%), Positives = 77/255 (30%), Gaps = 27/255 (10%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
           A  R+        +  P ++ +  +      +   +  VY  +   D   +R+ +  +  
Sbjct: 24  AEARWRARFHAPRISVPEWARDAPEANVYVSNASGVWEVYAWNRATDEH-RRVTDRPNGT 82

Query: 261 LAPRFSSNGKRALISVQKDEA------MDIYSVDLQSNATERLTN-TLFINISASYSPDS 313
           L    S +G+        D         + ++    S   + + +               
Sbjct: 83  LQSTPSPDGEWIWWFDDTDGDEFGSWVREPFAATEGSKPEKAVPDVHDGYQAGLEI---G 139

Query: 314 SQIVF--ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +++V    S  +G E    +   G + +R              S    LIA +       
Sbjct: 140 AKVVAVGVSTDDGSELFARI---GGETRRF-YSHPDDAGIASLSRDESLIAISHSEHGDS 195

Query: 372 A---IGVMKKDGSQERLLVEDSNLQAPT---WSP---SGRSLIFSRKKDGDTGSKLYSID 422
               + V+  DG        D   +A +   +SP     + L+   ++ G     ++ + 
Sbjct: 196 RHPALRVLATDGFGTVAEKWDGAGKALSALEFSPLPGD-QRLLVLHERRGREELLVWDVR 254

Query: 423 LNGRNETLINTPAYA 437
            +   E  ++ P   
Sbjct: 255 ADTETEIELDLPGEV 269


>gi|224084484|ref|XP_002307312.1| hypothetical protein POPTRDRAFT_760587 [Populus trichocarpa]
 gi|222856761|gb|EEE94308.1| hypothetical protein POPTRDRAFT_760587 [Populus trichocarpa]
          Length = 317

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 27/212 (12%), Positives = 73/212 (34%), Gaps = 16/212 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +          +   +FS + + +  ++ D         +          + +F    
Sbjct: 11  YTLTQTLTGHKSPISSVKFSADGRLLGSSSADKTLRTYSISLSNPPTSPITHLHDFHGHE 70

Query: 261 LAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQI 316
                  FSS+ +  + S   D+ + ++  D+ +  T +  +     +   +++P S+ I
Sbjct: 71  QGVSDLAFSSDSRFIV-SASDDKTLRLW--DVTTGHTIKTLHGHTNYVFCVNFNPQSNMI 127

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
           V  S     E + +         ++            ++ +G LI  + + G      + 
Sbjct: 128 VSGSF---DETVRIWDVKSGKCLKVLPAHSDPVTAVDFNREGSLIVSSSYDG---LCRIW 181

Query: 377 KKDGSQ-ERLLVEDSN--LQAPTWSPSGRSLI 405
                   + L++D N  +    +SP+G+ ++
Sbjct: 182 DAGTGHCIKTLIDDENPPVSFVKFSPNGKFIL 213


>gi|167533957|ref|XP_001748657.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|322518350|sp|A9V790|LIS1_MONBE RecName: Full=Lissencephaly-1 homolog
 gi|163772898|gb|EDQ86544.1| predicted protein [Monosiga brevicollis MX1]
          Length = 410

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/212 (11%), Positives = 60/212 (28%), Gaps = 26/212 (12%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
             +VS     ++ V + D           D  +   RF     +V  A+ D      + +
Sbjct: 161 NRLVSCSTDMTIKVWNMDNFTCTKTLSGHDHTVSSVRFDHTGDRVFSASRDK----TIKI 216

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            +       + +      + +   S++G     S   D  + ++SV          ++  
Sbjct: 217 WELATGYCLQTLQGHSDWVRSIDVSADGAWIC-SASSDHTVRVWSV-ASGECKHVWSDHE 274

Query: 302 FINISASYSP-----------DSSQIV--------FESDREGKEQLYVMQSNGSDQKRIS 342
            +   AS++P             S+          F +     + + +   +        
Sbjct: 275 HVVEHASFAPLVAHEALNLMIFGSKPSAEAASKGPFVASASRDKSICLFDVSTGQHLARL 334

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
              +       WS  G  + F+    +   + 
Sbjct: 335 TGHDNWVRATAWSRGGRYL-FSVADDKTMRVW 365


>gi|156086628|ref|XP_001610723.1| hypothetical protein [Babesia bovis T2Bo]
 gi|154797976|gb|EDO07155.1| conserved hypothetical protein [Babesia bovis]
          Length = 331

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 50/276 (18%), Positives = 98/276 (35%), Gaps = 39/276 (14%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDED-ILRVY 240
           E++V+     S+ +   + A I  +  S+   +   RF+    ++   +   +     V 
Sbjct: 52  ETMVTSSQDKSVFIYSLNKACITNILQSKKHGVSGVRFTNESPRIIVCSSSYDATAASVK 111

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSS--NGKRALISVQKDEAMDIYSVDLQSNATERLT 298
           L DT  +R  +       +I     S   N    LI+   D    +Y+ D          
Sbjct: 112 LWDTVENRYMRSFSLGAPLISGRGISPHPNKDMMLITTAND-TCSLYNYD---------- 160

Query: 299 NTLFINISASYSPDSSQI--VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
                N +  +S    +I   F    +    ++ + ++  ++K IS    + Y    ++P
Sbjct: 161 -----NSTPLFSYKGRKIIGAF----DTLGLIFALYTSSVEKKEISLYDLSRYQSIDFNP 211

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDG-------SQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
            G  +           I  M           ++   +V+D +L  P+ SP GR L+    
Sbjct: 212 NGRSLVIGTNFARLICINAMNGTTLFACCYDNRPSYIVDDKDLCFPSISPDGRYLL---- 267

Query: 410 KDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGF 445
             G T  +L   +  G+N   +  P +   P +  F
Sbjct: 268 -SGCTDGRLSIWNFKGQNVCCL--PGHEGPPHFACF 300


>gi|90081140|dbj|BAE90050.1| unnamed protein product [Macaca fascicularis]
          Length = 245

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 35/80 (43%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIV 317
                   S ++SPDSS + 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC 230



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 1/81 (1%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 149 NGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 208

Query: 385 LLVEDSNL-QAPTWSPSGRSL 404
           +L    N   +  +SP    L
Sbjct: 209 VLRGHQNWVYSCAFSPDSSML 229


>gi|262393064|ref|YP_003284918.1| hypothetical protein VEA_002291 [Vibrio sp. Ex25]
 gi|262336658|gb|ACY50453.1| hypothetical protein VEA_002291 [Vibrio sp. Ex25]
          Length = 328

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 80/220 (36%), Gaps = 25/220 (11%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
             +   ++   R S N +    A+      +   + D    ++        ++I     +
Sbjct: 75  LDADANVVSHIRISDNGRYAVTASQ-----MNFAVWDLGWTQSKGLWSISDALIRDVDIT 129

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           SNG++ L+ +   +A+ +  V       E L +   +N S + SP+     F        
Sbjct: 130 SNGEQVLLGLSNGKAIYVNLV--TGRRLEFLAHREKVN-SVAISPNGR---FALTGGNDY 183

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           + Y+  +      R + + E           G  +A T   G +  I  +K  G +   L
Sbjct: 184 KAYLWDTETGQVLR-TFEHEQRVVRVALQRDGK-LAMTSDGGNQAVIWDLKT-GQEVTQL 240

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
                    +WS   R LIFS  +  D G++L +   +GR
Sbjct: 241 S--------SWS---RQLIFSTARFSDDGTQLVTGTPSGR 269



 Score = 42.3 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 44/265 (16%), Positives = 88/265 (33%), Gaps = 41/265 (15%)

Query: 73  LQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGKDRLRV-----E 127
           L R   F L+        + + +   +  +   L A   V   +      R  V      
Sbjct: 42  LSRDGRFALLYSQQHHLMLWDLEQNEQLANLGELDADANVVSHIRISDNGRYAVTASQMN 101

Query: 128 FRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSG 187
           F +WD+          +  S   W     +ISD + + +     D  S    V   + +G
Sbjct: 102 FAVWDLG---------WTQSKGLW-----SISDALIRDV-----DITSNGEQVLLGLSNG 142

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
                + V    G  + +L             SPN +          +  + YL DT   
Sbjct: 143 KA---IYVNLVTGRRLEFLAHREKVNSV--AISPNGRF----ALTGGNDYKAYLWDTETG 193

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTL--FIN 304
           +  +   + + ++       +GK   +++  D        DL++     +L++     I 
Sbjct: 194 QVLRTFEHEQRVVR-VALQRDGK---LAMTSDGGNQAVIWDLKTGQEVTQLSSWSRQLIF 249

Query: 305 ISASYSPDSSQIVFESDREGKEQLY 329
            +A +S D +Q+V      G+  ++
Sbjct: 250 STARFSDDGTQLV-TGTPSGRVSIW 273



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------YS 310
                +   S +G+ AL+  Q+     +   DL+    E+L N   ++  A+       S
Sbjct: 34  PQGATSFALSRDGRFALLYSQQ---HHLMLWDLE--QNEQLANLGELDADANVVSHIRIS 88

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            +    V  S         V     +  K +    +A   D   +  G+ +     +G+ 
Sbjct: 89  DNGRYAVTASQ----MNFAVWDLGWTQSKGLWSISDALIRDVDITSNGEQVLLGLSNGK- 143

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
            AI V    G +   L     + +   SP+GR   F+     D  + L+  
Sbjct: 144 -AIYVNLVTGRRLEFLAHREKVNSVAISPNGR---FALTGGNDYKAYLWDT 190



 Score = 36.5 bits (83), Expect = 8.8,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 41/130 (31%), Gaps = 11/130 (8%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ 315
            R  + +   S NG+    ++        Y  D ++    R        +  +   D  +
Sbjct: 160 HREKVNSVAISPNGR---FALTGGNDYKAYLWDTETGQVLRTFEHEQRVVRVALQRDG-K 215

Query: 316 IVFESDREGKEQLYVMQS-NGSDQKRIS-QDKEASYFDPVWSPQGDLIAFTKFSGEKFAI 373
           +   SD  G  Q  +     G +  ++S   ++  +    +S  G  +     SG    +
Sbjct: 216 LAMTSD--GGNQAVIWDLKTGQEVTQLSSWSRQLIFSTARFSDDGTQLVTGTPSG---RV 270

Query: 374 GVMKKDGSQE 383
            +      + 
Sbjct: 271 SIWDTQTGKR 280


>gi|57091271|ref|XP_537739.1| PREDICTED: similar to WD SOCS-box protein 1 isoform 3 isoform 1
           [Canis familiaris]
          Length = 247

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 35/80 (43%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIV 317
                   S ++SPDSS + 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC 230



 Score = 38.8 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 1/81 (1%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 149 NGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 208

Query: 385 LLVEDSNL-QAPTWSPSGRSL 404
           +L    N   +  +SP    L
Sbjct: 209 VLRGHQNWVYSCAFSPDSSML 229


>gi|320164830|gb|EFW41729.1| Cdc20 [Capsaspora owczarzaki ATCC 30864]
          Length = 504

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 39/280 (13%), Positives = 99/280 (35%), Gaps = 18/280 (6%)

Query: 133 VKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNS 192
             D      +          ++   + +    +       F + + + S ++++  + NS
Sbjct: 135 TVDANATSARTVTGKTKQTMRVVPQVPEKTLDAPGMHDDFFMNVLDWNSNNLLAVGLSNS 194

Query: 193 LCVMDRD-GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           + V +   G+  R L    D  +   ++S     +A  + D      V + D   ++  +
Sbjct: 195 VYVWNASSGSICRLLELKDDAHVTSLKWSEADNYLAVGSSDS----SVAIYDVNREKQIR 250

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
            +   +  + A  +       L S     A+  + V L ++     +       + S+SP
Sbjct: 251 NMVGHQGSVPALSWR---SHILTSGSTSGAIHNHDVRLPNHHVGTYSAHTGAVCNVSWSP 307

Query: 312 DSSQIVFESDREGKEQ-LYVMQ----SNGSDQKRISQDKEASYFDPVWSP-QGDLIAFTK 365
           D +Q+       G +  ++V       + S      +   A+     WSP Q +L+A   
Sbjct: 308 DGTQLA----SGGNDNSVFVWDGVTSLSSSTPAHSLEGHGAAVKALAWSPMQANLLATGA 363

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              ++        +G+   ++   + + +  WS + + ++
Sbjct: 364 GLADRHIRFWNTANGALMNVIDTGAQISSLMWSKNHKEIV 403



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/267 (13%), Positives = 77/267 (28%), Gaps = 36/267 (13%)

Query: 109 QVLVTGRVIKEGKDRLRV-----EFRLWDVKDRKQI---IGKKFFSSPASWRKIAHTISD 160
              VT     E  + L V        ++DV   KQI   +G +      SWR  +H ++ 
Sbjct: 214 DAHVTSLKWSEADNYLAVGSSDSSVAIYDVNREKQIRNMVGHQGSVPALSWR--SHILTS 271

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFS 220
                     G  ++  + +    V     ++  V +                     +S
Sbjct: 272 ------GSTSGAIHNHDVRLPNHHVGTYSAHTGAVCNV-------------------SWS 306

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+  ++A    D+   +   +           +    + + A  +S      L +     
Sbjct: 307 PDGTQLASGGNDNSVFVWDGVTSLSSSTPAHSLEGHGAAVKALAWSPMQANLLATGAGLA 366

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              I   +  + A   + +T     S  +S +  +IV  S      +L + +        
Sbjct: 367 DRHIRFWNTANGALMNVIDTGAQISSLMWSKNHKEIV-ASHGLPSNRLTIWKYPTLQMVA 425

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFS 367
                +        SP G+ +      
Sbjct: 426 ELNGHQGRVLHMAMSPDGETVVSASSD 452


>gi|313231761|emb|CBY08874.1| unnamed protein product [Oikopleura dioica]
          Length = 708

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 65/182 (35%), Gaps = 19/182 (10%)

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL- 289
             D+D L +  +    +   +++      +     S        S  +D  + ++S+ + 
Sbjct: 413 MLDKDRLELDNILQVSETPTRKLLGHTGAVYGVSISPRKDFLA-SGGEDGTVRLWSLFVY 471

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFES---DREGKEQLYVMQSNGSDQKRISQDKE 346
           Q     R    L+     ++SP  +   F S   DR     + V  ++  +  R+     
Sbjct: 472 QCIIVHR--GHLWPVWDVTFSPYGNY--FCSVGMDRS----VRVWVTDKENPIRMMAGHY 523

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLV-EDSNLQAPTWS-PSGRS 403
           +      + P G+ IA     GE   I +    DG   R L    S++   +WS   G+ 
Sbjct: 524 SDVTVCKFHPNGNYIA---TGGEDRCIRLWDLLDGKCVRQLTGHRSSISVLSWSTACGKY 580

Query: 404 LI 405
           L 
Sbjct: 581 LA 582



 Score = 43.1 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 49/144 (34%), Gaps = 6/144 (4%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ +          +       +++  FSP      + +   +  +RV++ D  
Sbjct: 456 SGGEDGTVRLWSLFVYQCIIVHRGHLWPVWDVTFSPYGN--YFCSVGMDRSVRVWVTDKE 513

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + +    S +   +F  NG     +  +D  + ++ + L      +LT       
Sbjct: 514 --NPIRMMAGHYSDVTVCKFHPNGNYIA-TGGEDRCIRLWDL-LDGKCVRQLTGHRSSIS 569

Query: 306 SASYSPDSSQIVFESDREGKEQLY 329
             S+S    + +   D  G  + +
Sbjct: 570 VLSWSTACGKYLATGDIGGHVRFW 593


>gi|281205229|gb|EFA79422.1| WD40 repeat-containing protein [Polysphondylium pallidum PN500]
          Length = 873

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 56/171 (32%), Gaps = 34/171 (19%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDE----DILRVYLMDTRIDRAPKRIGNFRSMI 260
                    +F     P+  + A    D++     I  V + +  +D    R+ N     
Sbjct: 7   TWVEHSGYSIFSIDIHPDGTRFATGGGDNKVKIWSIAPVVVEEAELDSNVPRLLNSMESH 66

Query: 261 LAP----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
             P    R+S +GK    S   D  + ++ + L          + FI++ +S        
Sbjct: 67  YGPVNCVRWSRDGKYLA-SGSDDNLVMVWGLTLSGG------RSSFISVGSS-------- 111

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
              S++  +  + V    G           A   +  WSP G  +A + F 
Sbjct: 112 --TSEKIVENWICVYTLRG---------HSADISEIAWSPDGKYLASSSFD 151


>gi|226294216|gb|EEH49636.1| periodic tryptophan protein [Paracoccidioides brasiliensis Pb18]
          Length = 915

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 72/216 (33%), Gaps = 18/216 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ QK+  A  D +    + + D              S + A +FS  G   L +   
Sbjct: 339 YSPDGQKIITAADDGK----IKVWDINSGFCIVTFTEHTSGVTACQFSKRGN-VLFTASL 393

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++       T    ++ S   + D S  V  +       +++        
Sbjct: 394 DGSIRAWDL-IRYRNFRTFTAPSRLSFS-CLAVDPSGEVVCAGSLDSFDVHIWSVQTGQL 451

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                  +       ++  G  +    +        +  +  + E  L   ++L +  + 
Sbjct: 452 LDQLSGHQGPVSSLSFASDGSHLVSGSWDHTVRVWSIFGRSQTSE-PLELQADLLSVAFR 510

Query: 399 PSGRSLIFSRKKDGDTGSKLYSID-------LNGRN 427
           P G+ +  +   DG      +S+D       ++GR 
Sbjct: 511 PDGKQIA-ASTLDGQLTF--WSVDDAVQVGGIDGRR 543



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 77/211 (36%), Gaps = 16/211 (7%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + + +A+ +     +L V+   +      K+ G+  S+     +S +G++  I+   D 
Sbjct: 298 NSGEWIAFGSPKLGQLL-VWEWQSE-SYILKQQGHLDSINSL-VYSPDGQKI-ITAADDG 353

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + ++ ++         T       +  +S   + ++F +  +G  + + +     + + 
Sbjct: 354 KIKVWDIN-SGFCIVTFTEHTSGVTACQFSKRGN-VLFTASLDGSIRAWDL-IRYRNFRT 410

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWS 398
            +     S+      P G+++         F + +      Q   +L      + + +++
Sbjct: 411 FTAPSRLSFSCLAVDPSGEVVCAGSLD--SFDVHIWSVQTGQLLDQLSGHQGPVSSLSFA 468

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             G  L+      G     +    + GR++T
Sbjct: 469 SDGSHLV-----SGSWDHTVRVWSIFGRSQT 494


>gi|168034305|ref|XP_001769653.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679002|gb|EDQ65454.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 359

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 36/284 (12%), Positives = 82/284 (28%), Gaps = 26/284 (9%)

Query: 166 ITGEKGDFNSRILFVSESV-VSGIIKNSLCVMDRDGA-NIRYLTPSRDQILFEPRFSPNQ 223
           +TG  G   +       +   SG     + + +  G  +   +       + +  ++ + 
Sbjct: 60  LTGHGGAVYTMKFNPQGTAIASGSHDKDIFLWNVQGDCDNYMVLKGHRNAVLDLCWTSDG 119

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           Q +  A+ D      V   D    +  K++      + +   +  G   ++S   D    
Sbjct: 120 QHIISASPDK----TVRAWDAVTGKQIKKMAEHSLYVNSCSAARRGPPLIVSGSDDGTAK 175

Query: 284 IYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
           ++ +  +       T      ++A    D +  +F    +    + V     ++     Q
Sbjct: 176 LWDMRHRGCIQ---TFPDKYQVTAVAFSDGADKIFSGGID--NDIKVWDLRKNEVAMKLQ 230

Query: 344 DKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK---DGSQERLLVEDSNLQA-----P 395
               +      SP G  +           I  M+         ++     +         
Sbjct: 231 GHTETITSMQLSPDGSYLLTNSMDCT-LRIWDMRPYAPQNRCVKIFTGHQHNFEKNLLRC 289

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
            WSP G+ +       G     +Y  D   R   L   P ++  
Sbjct: 290 NWSPDGQKV-----TSGSADRMVYVWDTTSR-RILYKLPGHSGS 327


>gi|149039645|gb|EDL93807.1| rCG57310 [Rattus norvegicus]
          Length = 727

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 48/115 (41%), Gaps = 2/115 (1%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS N + +A A     D   + L +    R  + +    ++I    +S +  R L++   
Sbjct: 468 FSHNGRILA-AACASRDGYPIILYEIPSGRFMRELCGHLNIIYDLDWSKD-DRYLVTSSS 525

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           D    ++  ++ S +T R+        +A + P + ++V     +   +++ + +
Sbjct: 526 DGTARVWKNEINSTSTFRVLPHPSFVYTARFHPATRELVVTGCYDSMIRIWKVDA 580


>gi|70731057|ref|YP_260798.1| CsgG family protein [Pseudomonas fluorescens Pf-5]
 gi|68345356|gb|AAY92962.1| CsgG family protein [Pseudomonas fluorescens Pf-5]
          Length = 242

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 18/133 (13%)

Query: 4   RFFIAEELNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANY----SPVSIAFTKFV--- 56
           R  +  +L +      +L  + G    S  A       SA+     + V +A  KF    
Sbjct: 16  RVRVISKLMLSAVALAVLAGMSGCATESSRALPVEKVQSASQVWTGARVPMAVGKFDNRS 75

Query: 57  ---------SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLG 107
                     +D LGG+   ++   LQ+++ F+++ +D+  +         + Q     G
Sbjct: 76  SYMRGIFSDGVDRLGGQAKTILITHLQQTNRFSVLDRDNMGEIQQEAAIKGQAQ--KLKG 133

Query: 108 AQVLVTGRVIKEG 120
           A  +VTG V + G
Sbjct: 134 ADFVVTGDVTEFG 146


>gi|50511316|ref|NP_001002277.1| jouberin [Rattus norvegicus]
 gi|73921661|sp|Q6DTM3|AHI1_RAT RecName: Full=Jouberin; AltName: Full=Abelson helper integration
           site 1 protein homolog; Short=AHI-1
 gi|49615316|gb|AAT66919.1| AHI1 [Rattus norvegicus]
          Length = 1047

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 48/115 (41%), Gaps = 2/115 (1%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           FS N + +A A     D   + L +    R  + +    ++I    +S +  R L++   
Sbjct: 468 FSHNGRILA-AACASRDGYPIILYEIPSGRFMRELCGHLNIIYDLDWSKD-DRYLVTSSS 525

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           D    ++  ++ S +T R+        +A + P + ++V     +   +++ + +
Sbjct: 526 DGTARVWKNEINSTSTFRVLPHPSFVYTARFHPATRELVVTGCYDSMIRIWKVDA 580


>gi|218676782|ref|YP_002395601.1| hypothetical protein VS_II1021 [Vibrio splendidus LGP32]
 gi|218325050|emb|CAV26887.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 417

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 34/93 (36%), Gaps = 4/93 (4%)

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW----SPQGDLIAFTKFSGEKFAIG 374
            +D E   +++ ++ +G+D + ++ D  +      +    SP    +A+    G      
Sbjct: 138 VNDYENGYKIWSVKIDGTDLRLVTDDMPSMASPQNYVTSRSPNNRYVAYAYSFGGPLIKA 197

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +   +  Q   L   S      W+     + FS
Sbjct: 198 IFDIETQQSIQLGSASTKPYLVWADDSSYIYFS 230



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 51/128 (39%), Gaps = 23/128 (17%)

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-S 390
            ++  D+ RI       +++ V S               + I  +K DG+  RL+ +D  
Sbjct: 115 DASSYDKPRIQF-----WWNNVSSRD----PLVNDYENGYKIWSVKIDGTDLRLVTDDMP 165

Query: 391 NLQAP-----TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPA------YASD 439
           ++ +P     + SP+ R + ++    G     ++  D+  +    + + +      +A D
Sbjct: 166 SMASPQNYVTSRSPNNRYVAYAYSFGGPLIKAIF--DIETQQSIQLGSASTKPYLVWADD 223

Query: 440 PQWVGFMD 447
             ++ F D
Sbjct: 224 SSYIYFSD 231


>gi|195377373|ref|XP_002047465.1| GJ11919 [Drosophila virilis]
 gi|194154623|gb|EDW69807.1| GJ11919 [Drosophila virilis]
          Length = 646

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 9/108 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRA-PKRIGNFRSMILAPRFSSNGKRAL---- 273
           FSP+ +  AY+   +  +L V   +T      P +    R      +FS  G        
Sbjct: 49  FSPDGRYFAYSNGVEVKVLHVPTSNTGNAGCWPVQCTLPRPKAFYLKFSPRGNYLCTWEH 108

Query: 274 ISVQKD---EAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIV 317
            ++ KD    A ++   D+ +      +      +   S+S D S   
Sbjct: 109 YAITKDRPEGAANLLVYDVATGTEVFAIVQKNQTDWQPSWSSDESIFA 156


>gi|169619507|ref|XP_001803166.1| hypothetical protein SNOG_12952 [Phaeosphaeria nodorum SN15]
 gi|160703842|gb|EAT79752.2| hypothetical protein SNOG_12952 [Phaeosphaeria nodorum SN15]
          Length = 620

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 46/300 (15%), Positives = 102/300 (34%), Gaps = 32/300 (10%)

Query: 145 FSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSES------VVSGIIKNSLCVMDR 198
           F   + +R +    +   Y ++   K  +++ ++  +          SG    ++  ++ 
Sbjct: 5   FVRASKYRHVFGQGAKKCYDNLRISKNAWDTNLIKANPEYIAVNWEASGGGAFAVIPINE 64

Query: 199 DGANIRYL--TPSRDQILFEPRFSP----------NQQKVAYATYDDEDILRVYLMDTRI 246
            G     +         + +  +SP          +  KV      +   L     +   
Sbjct: 65  KGRAPDQIPLFRGHTAAVLDTDWSPFNDSLIASASDDGKVFIWKVPENFTLHTDAEEPAD 124

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT-NTLFINI 305
                ++      +    F+   +  L S   D  + ++  D+++    RLT     I  
Sbjct: 125 VSPQVKLSGHMRKVGHVLFNPAAENVLASSSGDCTVKLW--DVEAGKA-RLTLTHKDIVQ 181

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA--- 362
           S S+S D + +V  S R+ K +++ ++      + +     A     VW  + D IA   
Sbjct: 182 SLSWSADGAYLVTTS-RDKKLRVWDVRQE-KPAQEVPGHPGAKNSRAVWMGEHDRIATTG 239

Query: 363 FTKFSGEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           F++ S  +  +   +          +L   S +  P W   G   ++   K GD   + Y
Sbjct: 240 FSRMSDRQLGLWDPRNPSEPIGGFEILDSISGVCMPFWD-DGTQCLYLAGK-GDGNIRYY 297


>gi|114328069|ref|YP_745226.1| PGRS-subfamily Gly-rich protein [Granulibacter bethesdensis
           CGDNIH1]
 gi|114316243|gb|ABI62303.1| PGRS-subfamily of Gly-rich proteins [Granulibacter bethesdensis
           CGDNIH1]
          Length = 346

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 69/201 (34%), Gaps = 13/201 (6%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           + +D       KRI       +  +FS +G+  + +    + +DIY  D  S        
Sbjct: 101 FFLDPLTGAEQKRIVFSDPYQI--QFSPDGRWLVSAALARDQIDIY--DGHSFKLLHRIQ 156

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
              +    +++PD S++ F S ++   ++            + + K       V    G 
Sbjct: 157 APSMPSHINFTPD-SKVAFVSLQK-TSKVVAFSPETGKI--LWEQKSGRTPAGVLYLNGK 212

Query: 360 LIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
           L+        +  I VM    G  ER +           SP G+ +++   + G T S L
Sbjct: 213 LLV---GDMGEDTIAVMDPVTGKLERKIRTGKGAHNLFLSPDGK-VLYVCNRVGGTISLL 268

Query: 419 YSIDLNGRNETLINTPAYASD 439
               L  + E  I       D
Sbjct: 269 DPATLTVKKEFAIPGGPDDLD 289



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 90/262 (34%), Gaps = 26/262 (9%)

Query: 185 VSGIIKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V     N++  +D   GA  + +  S     ++ +FSP+ + +  A    +    + + D
Sbjct: 92  VGDTAGNTMFFLDPLTGAEQKRIVFSDP---YQIQFSPDGRWLVSAALARDQ---IDIYD 145

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
               +   RI    SM     F+ + K A +S+QK     + +   ++            
Sbjct: 146 GHSFKLLHRI-QAPSMPSHINFTPDSKVAFVSLQK--TSKVVAFSPETGKI-LWEQKSGR 201

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
             +     +   +V      G++ + VM       +R  +  + ++ +   SP G ++  
Sbjct: 202 TPAGVLYLNGKLLV---GDMGEDTIAVMDPVTGKLERKIRTGKGAH-NLFLSPDGKVLYV 257

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVE-DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
               G    I ++       +             ++P G   I++ ++       +  I+
Sbjct: 258 CNRVGGT--ISLLDPATLTVKKEFAIPGGPDDLDFAPDGS--IWATRR---WAHTVAIIN 310

Query: 423 L-NGRNETLINTPAYASDPQWV 443
             +G   T+      +    W+
Sbjct: 311 PKDGSFTTIPT--GRSPHGIWL 330


>gi|327289163|ref|XP_003229294.1| PREDICTED: coronin-7-like, partial [Anolis carolinensis]
          Length = 796

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 48/139 (34%), Gaps = 11/139 (7%)

Query: 153 KIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGAN-----IRYLT 207
           ++A   +    Q+                 ++     +  L  +  +G          + 
Sbjct: 277 RLADAAAMPTIQNGAPVSDLCWDPFDPRRLAIAGEDARIRLWRLGPEGLQETLLEPESVL 336

Query: 208 PSRDQILFEPRFSP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               + ++  RF P     +A +++D      V + D    +   ++   R  I +  +S
Sbjct: 337 RGHSEKVYSIRFHPLAADILASSSFDM----SVRIWDLGNGKEAMKLDGHRDQIFSLAWS 392

Query: 267 SNGKRALISVQKDEAMDIY 285
            +G+R   +V KD  + +Y
Sbjct: 393 PDGRRLA-TVSKDGKVRVY 410



 Score = 39.6 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 75/213 (35%), Gaps = 14/213 (6%)

Query: 219 FSP-NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFSSNGKRALI 274
           + P + +++A A  D    L     +   +   +     R     + + RF       L 
Sbjct: 298 WDPFDPRRLAIAGEDARIRLWRLGPEGLQETLLEPESVLRGHSEKVYSIRFHPLAADILA 357

Query: 275 SVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           S   D ++ I+ +        +L        S ++SPD  ++   S ++GK ++Y  +  
Sbjct: 358 SSSFDMSVRIWDL-GNGKEAMKLDGHRDQIFSLAWSPDGRRLATVS-KDGKVRVYDPRMG 415

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS-GEKFAIGVMKKDGSQERLLVEDSNLQ 393
               +     +       VW   G+ +  + F    +  + +   +      L       
Sbjct: 416 PEPLQEGPGPEGGRGARIVWVCGGNFLLVSGFDCRSERQLSLYGAESVSAGPLAVLGLDV 475

Query: 394 APT-----WSPSGRSLIFSRKKDGDTGSKLYSI 421
           AP+     + P   SL+F   K GDT   +Y I
Sbjct: 476 APSTLIPFYDPD-TSLVFLTGK-GDTRVFVYEI 506


>gi|258591738|emb|CBE68039.1| conserved exported protein of unknown function [NC10 bacterium
           'Dutch sediment']
          Length = 369

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 58/202 (28%), Gaps = 13/202 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+    AY   +    +    +   +      I    S   A   S +GK  L++  
Sbjct: 157 SISPDGG-HAYVPSERSHTVAALNLSLNVVAGELPIAVRPS---AVEISPDGKYLLVASA 212

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              ++    +D  +  + R            + P      +  +R       +  +N   
Sbjct: 213 VSNSVT--VIDTTTRQSLRRIPVGDDPHHVVFGP-GGAFAYVLNRGSDSLSVIQMANHQV 269

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER-LLVEDSNLQAPT 396
              I   KE S  D   +P G  I  T   G    + V+    S     +   +      
Sbjct: 270 VATIPVGKEPSDAD--ITPSGHYIYVTNTRGG--DVSVISTQTSAVVGTIPVGARPHNIV 325

Query: 397 WSPSGRSLIFSRKKDGDTGSKL 418
            S  GR   F      D  S +
Sbjct: 326 ISGDGRY-AFVANTGSDDISVI 346


>gi|302383980|ref|YP_003819803.1| hypothetical protein Bresu_2873 [Brevundimonas subvibrioides ATCC
           15264]
 gi|302194608|gb|ADL02180.1| conserved hypothetical protein [Brevundimonas subvibrioides ATCC
           15264]
          Length = 452

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 35/239 (14%), Positives = 75/239 (31%), Gaps = 38/239 (15%)

Query: 127 EFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVS 186
           E RL D  + +  +           R++ H  +D +              I+F  E    
Sbjct: 212 EVRLNDRLEARIPMEIFTLDVRTGERRVVHRATDWLNHLQFSPTDPGL--IMFCHEGPWH 269

Query: 187 GIIKNSLCVMDRDGANIRYLTPS--RDQILFEPRFSPNQQKVAY---ATYDDEDILRVYL 241
            + +  +  +  DG  +  +       +I     F+ + + + Y        +  +  Y 
Sbjct: 270 KVDR--IWTIRTDGTGMTRVHTRTMNMEIAGHEWFADDGRTIWYDLQTPRGQKFTVAGYE 327

Query: 242 MDTRIDRAPKRIGNFRSMILAPR-----FSSNGKRALISVQKDEAMDIYSV------DLQ 290
            +T +        +  S+          F+ +G  A +  +  +   IY        D+ 
Sbjct: 328 PETGVRTHYHLERDEWSVHFNSSHDGALFAGDGGDAEMVARAPDGKWIYLFRPEAIPDVA 387

Query: 291 SNAT--------------ERLTNTLFINI--SA--SYSPDSSQIVFESDREGKEQLYVM 331
                             ERL N    +       +++PD+  +VF S+  G   +Y +
Sbjct: 388 GLHAPNAGDLIRPGIFRSERLVNMGSHDYRLEPNITFTPDNRWLVFRSNMHGANHVYAV 446



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 34/240 (14%), Positives = 79/240 (32%), Gaps = 46/240 (19%)

Query: 203 IRYLTPSRDQILFEPRFSP-NQQKVAYATYDD-EDILRVYLMDTRIDRAPKRIGNFRSMI 260
            R +       L   +FSP +   + +        + R++ + T      +      +M 
Sbjct: 236 ERRVVHRATDWLNHLQFSPTDPGLIMFCHEGPWHKVDRIWTIRTDGTGMTRVHTRTMNME 295

Query: 261 LAPR--FSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI 316
           +A    F+ +G+     +Q  + +   +   + ++                    D   +
Sbjct: 296 IAGHEWFADDGRTIWYDLQTPRGQKFTVAGYEPETGVRTHY----------HLERDEWSV 345

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM 376
            F S  +G     +   +G D + +++           +P G  I   +        G+ 
Sbjct: 346 HFNSSHDGA----LFAGDGGDAEMVAR-----------APDGKWIYLFRPEAIPDVAGLH 390

Query: 377 KKDGSQ---------ERLLVEDSNLQ--AP--TWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
             +            ERL+   S+     P  T++P  R L+F     G   + +Y++++
Sbjct: 391 APNAGDLIRPGIFRSERLVNMGSHDYRLEPNITFTPDNRWLVFRSNMHG--ANHVYAVEI 448


>gi|198430817|ref|XP_002130040.1| PREDICTED: similar to CG17293 CG17293-PA [Ciona intestinalis]
          Length = 314

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 76/187 (40%), Gaps = 20/187 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V +S +SG +  ++ + D            R QI   P  S + + + +A   + +++++
Sbjct: 119 VDDSFLSGSLDKTIRLWDL----RSPTCQGRMQIPGRPIASFDPEGLIFAAGINSEMIKL 174

Query: 240 YLM---DTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER 296
           Y +   D       +   +      + +FSS+GK  LI+        I  +D       +
Sbjct: 175 YDLRSFDKGPFTTFRLQQDKDCDWTSLKFSSDGKLILIATN---GTVIRLIDAFHGQPLQ 231

Query: 297 LT-----NTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYF 350
            T     NT  + + AS+SPD    V    ++G  +++V  + NGS    ++        
Sbjct: 232 -TFMGHLNTKGLPLEASFSPDGQY-VLSGSQDG--RIHVWNAENGSKTAVLNGSHPGPLQ 287

Query: 351 DPVWSPQ 357
              ++P+
Sbjct: 288 CVKFNPR 294



 Score = 41.2 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 36/229 (15%), Positives = 74/229 (32%), Gaps = 20/229 (8%)

Query: 195 VMDRDGANI---RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
           ++  D AN    +    S+   +    ++     V Y++   +D +R        ++  +
Sbjct: 45  IVIYDCANEGKSKRTLNSKKYGVDHINYTHAGNTVIYSSNKVDDAIR--YQSLHDNKYLR 102

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
                   ++    S       +S   D+ + ++  DL+S   +         I AS+ P
Sbjct: 103 YFAGHTKRVVCLCMSPVDDS-FLSGSLDKTIRLW--DLRSPTCQGRMQIPGRPI-ASFDP 158

Query: 312 DSSQIVF--ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           +         S+      L           R+ QDK+  +    +S  G LI        
Sbjct: 159 EGLIFAAGINSEMIKLYDLRSFDKGPFTTFRLQQDKDCDWTSLKFSSDGKLILIAT---N 215

Query: 370 KFAIGVMKKDGSQERLLVED-----SNLQAPTWSPSGRSLIFSRKKDGD 413
              I ++     Q                  ++SP G+ ++ S  +DG 
Sbjct: 216 GTVIRLIDAFHGQPLQTFMGHLNTKGLPLEASFSPDGQYVL-SGSQDGR 263


>gi|145511996|ref|XP_001441920.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124409181|emb|CAK74523.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1294

 Score = 44.6 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 77/201 (38%), Gaps = 17/201 (8%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDD 233
           ++R+  ++ + +S     S+  ++  G N  ++  S D       +S + +   +  ++ 
Sbjct: 152 STRLKLMNLNWLSNAEIVSINQLNEKGENNYFILISSDNSQIISGYSSDIKTYRFDFFEK 211

Query: 234 EDILRV------------YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +    V             ++    D+    +G+    +    +S N K    S  KD+ 
Sbjct: 212 KIHKFVQGIINCLAQIDQNIISYGCDKKNTLLGDHNDNVRCLSYSQNMKLLA-SGSKDQK 270

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           + +++V+ +      L          S+SPD   +   SD    +Q+ +     S+Q  +
Sbjct: 271 IFLWNVNAK-KKIAVLEGHTGKINQLSFSPDGQCLASASD---DQQIKLWNIEQSEQSNV 326

Query: 342 SQDKEASYFDPVWSPQGDLIA 362
           S+  +       +S  G +IA
Sbjct: 327 SKGHQQCVNQVAFSKDGLIIA 347



 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 36/213 (16%), Positives = 70/213 (32%), Gaps = 38/213 (17%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWR-----KIAH 156
           +W S  A+++   ++ ++G++     F L    + + I G  + S   ++R     K  H
Sbjct: 161 NWLS-NAEIVSINQLNEKGENNY---FILISSDNSQIISG--YSSDIKTYRFDFFEKKIH 214

Query: 157 TISDDIYQSITGEK---------------GDFNSRILFVSESV-----VSGIIKNSLCVM 196
                I   +                   GD N  +  +S S       SG     + + 
Sbjct: 215 KFVQGIINCLAQIDQNIISYGCDKKNTLLGDHNDNVRCLSYSQNMKLLASGSKDQKIFLW 274

Query: 197 DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF 256
           + +      +       + +  FSP+ Q +A A+ D     ++ L +             
Sbjct: 275 NVNAKKKIAVLEGHTGKINQLSFSPDGQCLASASDDQ----QIKLWNIEQSEQSNVSKGH 330

Query: 257 RSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +  +    FS +G   LI         I   DL
Sbjct: 331 QQCVNQVAFSKDG---LIIASCSGDCSIILWDL 360


>gi|330253632|gb|AEC08726.1| leunig-like protein [Arabidopsis thaliana]
          Length = 806

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 69/210 (32%), Gaps = 25/210 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + + +A A +D +    V++ +    +          +I   RF  N  +   +  
Sbjct: 536 SFSYDGKLLASAGHDKK----VFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLA-TSS 590

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--- 334
            D+ + I+           ++      +S  + P  ++++   D     + + + ++   
Sbjct: 591 FDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVR 650

Query: 335 --GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                  ++        F    S     I   + + ++  I                SN+
Sbjct: 651 AVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFK-----------GHSSNV 699

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +  WSP+G  +        +   KL+S+ 
Sbjct: 700 HSVCWSPNGELVASVS----EDAVKLWSLS 725



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 75/218 (34%), Gaps = 18/218 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S      + + + +   +         I+ + RF PN  ++A +++D    ++++   + 
Sbjct: 546 SAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFD--KTIKIW-DASD 602

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + I    + +++  F       L S   +  +  + ++       +       + 
Sbjct: 603 PGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK-----GAST 657

Query: 306 SASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAF 363
              + P     +   S+      + +     ++++  I +   ++     WSP G+L+A 
Sbjct: 658 QVRFQPRTGQFLAAASE----NTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVA- 712

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPS 400
              S +   +  +   G     L    N   +  + PS
Sbjct: 713 -SVSEDAVKLWSLS-SGDCIHELSNSGNKFHSVVFHPS 748


>gi|119585402|gb|EAW64998.1| N-acylaminoacyl-peptide hydrolase, isoform CRA_d [Homo sapiens]
          Length = 537

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 28/187 (14%), Positives = 60/187 (32%), Gaps = 29/187 (15%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPR-FSPNQQKVAYATYDDEDIL----------RVYL 241
           LCV+D +  NI  L    + +      ++P    V +  +  E                 
Sbjct: 29  LCVLDVESGNISVLEGVPENVSPGQAFWAPGDAGVVFVGWWHEPFRLGIRFCTNRRSALY 88

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI----SVQKDEA-MDIYSVDLQSNA--- 293
               I    + + +    + +PR S +  R +     S+        +   D  +     
Sbjct: 89  YVDLIGGKCELLSDDSLAVSSPRLSPDQCRIVYLQYPSLIPHHQCSQLCLYDWYTKVTSV 148

Query: 294 -----TERLT-NTLFINIS----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ 343
                  +L  N   I  S      +S DS ++VF+S +  ++ L+ + +       ++ 
Sbjct: 149 VVDVVPRQLGENFSGIYCSLLPLGCWSADSQRVVFDSAQRSRQDLFAVDTQVGTVTSLTA 208

Query: 344 DKEASYF 350
                 +
Sbjct: 209 GGSGGSW 215


>gi|152986681|ref|YP_001349441.1| putative oligopeptidase [Pseudomonas aeruginosa PA7]
 gi|150961839|gb|ABR83864.1| probable oligopeptidase [Pseudomonas aeruginosa PA7]
          Length = 683

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 21/181 (11%)

Query: 254 GNFRSMILAPRFSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
           G+    + A   S + +    S+    DE   ++  DL S A + L      + S +++ 
Sbjct: 120 GDGFLSLGAFSISPDQRLLAYSLDTSGDEIYRLFVKDLASGAVQALPFD-DCDGSLTWAN 178

Query: 312 DSSQIVF-ESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAFTKFSG 368
           D+  + F E D   +   LY  +   +  + + ++ +  +F   + S     +     S 
Sbjct: 179 DNRTLFFGELDDTHRPHKLYRHRLGEAGAELVFEEGDGRFFLHCYRSSSERQLILLLNSK 238

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPT-----WSP-----SGRSLIFSRKKDGDTGSKL 418
                 V+  D         D    AP      + P      GR L   R         L
Sbjct: 239 TTSEAWVLDAD-----QPQGDFRCLAPREEGHEYYPDHGRLDGRGLWLIRSNQAGINFAL 293

Query: 419 Y 419
           Y
Sbjct: 294 Y 294



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 34/104 (32%), Gaps = 2/104 (1%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQA 394
           D   ++ D   S      SP   L+A++  +     + + V        + L  D    +
Sbjct: 114 DPNLLAGDGFLSLGAFSISPDQRLLAYSLDTSGDEIYRLFVKDLASGAVQALPFDDCDGS 173

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            TW+   R+L F    D     KLY   L      L+       
Sbjct: 174 LTWANDNRTLFFGELDDTHRPHKLYRHRLGEAGAELVFEEGDGR 217


>gi|119180216|ref|XP_001241601.1| hypothetical protein CIMG_08764 [Coccidioides immitis RS]
          Length = 1089

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 38/219 (17%), Positives = 69/219 (31%), Gaps = 29/219 (13%)

Query: 110  VLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRK-----------IAHTI 158
             ++ GRV ++            D+   +     +   S    R              H  
Sbjct: 801  AVMDGRVTRDPNGITNH----IDIIKHRTSNSPRTVISSNDDRIRILDCETNRFVSMHKF 856

Query: 159  SDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR 218
            +  I    T    D   R++                ++D +               F   
Sbjct: 857  ARAIN--CTDTSPDGRLRVII--------GDAPDAWIIDSETGKPVQTLIGHRDYGFACA 906

Query: 219  FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
            +SP+   +A +  D      V + D R+ R  + I +  +   + RFS  G      +  
Sbjct: 907  WSPDMLHIATSNQDK----TVNIWDARMWRTLQVIDSDVAGYRSLRFSPVGGGPRTLLMC 962

Query: 279  DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV 317
            + A  I  V+ Q+  T ++ +       A YSPD S+I 
Sbjct: 963  EPADRIAIVNAQTYQTRQVHDFFGEIGGADYSPDGSRIW 1001



 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 26/198 (13%), Positives = 66/198 (33%), Gaps = 30/198 (15%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+ +          D    +++D+   +  + +   R    A  +S +      +  +D
Sbjct: 866  SPDGR----LRVIIGDAPDAWIIDSETGKPVQTLIGHRDYGFACAWSPDMLHIA-TSNQD 920

Query: 280  EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
            + ++I+   +     + + + +    S  +SP           E  +++ ++ +     +
Sbjct: 921  KTVNIWDARM-WRTLQVIDSDVAGYRSLRFSPVGGGPRTLLMCEPADRIAIVNAQTYQTR 979

Query: 340  RISQDKEASYFDPVWSPQGDLIAFTKFS--------------GEKFAIGVMKKDGSQERL 385
            ++  D         +SP G  I                    G++F IG      ++ R 
Sbjct: 980  QV-HDFFGEIGGADYSPDGSRIWVANMDTKFGGFMEFDRREWGQEFGIGH-----TRRRR 1033

Query: 386  LVEDSNLQAPT----WSP 399
            +    +  +P     W P
Sbjct: 1034 IEAQGDFYSPDLPNEWLP 1051


>gi|322698530|gb|EFY90299.1| hypothetical protein MAC_03545 [Metarhizium acridum CQMa 102]
          Length = 850

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 24/192 (12%)

Query: 234 EDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            D L V ++ T+     K +               G+ A +S   D  + IYS+  +   
Sbjct: 116 SDELSVKIVSTKDITRVKHLREHSKPARHVALEPQGRLAALSCT-DGIIYIYSLTSEEPE 174

Query: 294 TER--------LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
             R        + +   I+   ++ PD     F      K+   + +++   Q+R +   
Sbjct: 175 LIRKVDGIIGTVDSDSEISTKVAWHPDGR--AFAVPTPTKDIQVISKNDWEKQRRFADGH 232

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSP------ 399
            +      WSP G L+A    +G+   + V +          + SN+    W P      
Sbjct: 233 LSDITALSWSPNGALLA---SAGKDGKVLVWETKTQSVIQRYDYSNVVDLAWHPSKNILS 289

Query: 400 ----SGRSLIFS 407
                G   I+S
Sbjct: 290 FATTDGEVFIYS 301


>gi|295096541|emb|CBK85631.1| 3-carboxymuconate cyclase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 331

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 32/233 (13%), Positives = 70/233 (30%), Gaps = 14/233 (6%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
           ++  Y    +   + V+ ++T       ++ +    +     S + +   + V+ +  + 
Sbjct: 2   KQTVYTASPESQQIHVWRLNTEGSLTLVQVVDVPGQVQPMVVSPDKRFLYVGVRPEFRVL 61

Query: 284 IYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS 342
            Y +     A    T    +  S +  S D       S       + V +          
Sbjct: 62  AYRISPDDGALTY-TAEAPLPGSPTHISTDHKGNFIFSGSYNAGCVSVTRLEDGIPVETV 120

Query: 343 QDKEASYFDPV--WSPQGDLIAFTKFSGEKFAIGVMKKDGS------QERLLVEDSNLQA 394
              E          SP    +       ++  +  +  DG        E   VE +  + 
Sbjct: 121 DVVEGLEGCHSANISPDNRTLWVPALKQDRICLFTLSDDGHLVAQSPAEVTTVEGAGPRH 180

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE---TLINTPAYASDPQWVG 444
             + P+ +   +   +   +       D NG+ E   TL   P+  SD +W  
Sbjct: 181 MVFHPN-QQYAYVVNELNSSVDVWELNDPNGQIECVQTLDMMPSDFSDTRWAA 232


>gi|254506596|ref|ZP_05118737.1| hypothetical protein VPMS16_566 [Vibrio parahaemolyticus 16]
 gi|219550469|gb|EED27453.1| hypothetical protein VPMS16_566 [Vibrio parahaemolyticus 16]
          Length = 941

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 55/137 (40%), Gaps = 3/137 (2%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+   +  +    +D   +  ++   +     I   RS+  +P F  +    + S   D
Sbjct: 453 SPDDTNLVASVKRSQDGWNLERLNL-TNLQWSTITKTRSVENSPVF-VDADTVMFSADYD 510

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
              ++Y   L S + E+LT  +    S  +S D+  ++++S       L  ++   +   
Sbjct: 511 GVFNVYRHTLGSQSVEQLTREVGGAFSPLWS-DTFGLIYQSYDSEGYTLRALKQPDALDN 569

Query: 340 RISQDKEASYFDPVWSP 356
            +  +  ASY  P  +P
Sbjct: 570 VVLGEVAASYQYPDPAP 586



 Score = 43.9 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 35/217 (16%), Positives = 68/217 (31%), Gaps = 27/217 (12%)

Query: 224 QKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMD 283
            ++ Y   D   I  ++ +     +       FR +    R+ +NG++ + S + D   +
Sbjct: 369 SRLVYYA-DGRGITDLFWLQGGTWKRLTERERFRDV----RWLANGQQVIASRKIDGFSE 423

Query: 284 IYSVDL-QSNATERLTNTLFINISASY--SPDSSQIVFESDRE-GKEQLYVMQSNGSDQK 339
           ++ +D+      +RL       +   Y  SPD + +V    R      L  +        
Sbjct: 424 LWLIDVMAPENKQRLWRGAENEVLGGYDLSPDDTNLVASVKRSQDGWNLERLNLTNLQWS 483

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED-SNLQAPTWS 398
            I++ +             D + F+      F +            L  +     +P WS
Sbjct: 484 TITKTRSVENSPVFV--DADTVMFSADYDGVFNVYRHTLGSQSVEQLTREVGGAFSPLWS 541

Query: 399 PSGRSLIFSRKKDGDTGSKLY-SIDLNGRNETLINTP 434
                         DT   +Y S D  G     +  P
Sbjct: 542 --------------DTFGLIYQSYDSEGYTLRALKQP 564


>gi|171184907|ref|YP_001793826.1| hypothetical protein Tneu_0432 [Thermoproteus neutrophilus V24Sta]
 gi|170934119|gb|ACB39380.1| hypothetical protein Tneu_0432 [Thermoproteus neutrophilus V24Sta]
          Length = 325

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 82/232 (35%), Gaps = 38/232 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+SP    +A       D    Y++    ++           ++   FS +G+R  + ++
Sbjct: 18  RWSPRGGLLALICESL-DRRDNYMVAAYSEQGIALWRQEFYSVVDAAFSPDGRRLGV-LR 75

Query: 278 KDEAMDIYSVDLQSNATERLTN-----------TLFINISASYSPDS--------SQIVF 318
           +   ++I  +D +S A ++  +           T+F   S S+S            +++F
Sbjct: 76  EGGELEI--LDAESGARQKTVDLSRFMWQHKLGTVFDAASVSWSSGGVIGGVSYDDKVLF 133

Query: 319 E----SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                    G E+++        +   S                +L A    SGE   I 
Sbjct: 134 VEAKPGGSGGSEEVFRALWAWRVETSASSGGTGVPLLRFSPADANLAAVGTRSGEL--IY 191

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
           V     S +R+      L+   WSP GR L+      G    +LY  D +GR
Sbjct: 192 VNLASKSIQRIPATVRFLE---WSPDGRWLV----VGGSETLRLY--DSHGR 234


>gi|145351828|ref|XP_001420264.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580498|gb|ABO98557.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 516

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 43/323 (13%), Positives = 92/323 (28%), Gaps = 62/323 (19%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
           DWN+ G                   + R+WD   + ++  K                   
Sbjct: 234 DWNADG---------TLLATGSYDGQARIWDTNGKLKMSLK------------------- 265

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF-S 220
                  +   F+ +     + ++SG +  +  V D    +++           +  + S
Sbjct: 266 -----HHKGPIFSLKWNKTGDCLLSGSVDKTAIVWDAKTGDMKQQFAFHSAPTLDVDWRS 320

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P   + A ++ D      +Y+     D+  K        + A ++  +G     S   D 
Sbjct: 321 P--TEFATSSMDH----SIYVCKLGDDKPIKAFNGHTDEVNAIKWDPSGTLLA-SCSDDF 373

Query: 281 AMDIYSVDLQSNATERLTNTLFINISAS-----YSPDS------SQIVFESDREGKEQLY 329
              ++S+   +          F           +SP           +  +       + 
Sbjct: 374 TAKVWSLKKDTCV------HDFNEHEKEIYTIKWSPTGPGTENPDLPLLLATASYDATIK 427

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           +            +      +   +SP G  +A   F  +   I  +K DGS  R    +
Sbjct: 428 LWDVESGKCLHTLEGHTDPVYSVAFSPDGKYLASGSFD-KHLHIWNVK-DGSLMRTYQGE 485

Query: 390 SNLQAPTWSPSGRSLI--FSRKK 410
             +    W+  G  +   FS  +
Sbjct: 486 GGIFEVCWNKEGTKVAACFSNNR 508


>gi|324998598|ref|ZP_08119710.1| dipeptidyl peptidase IV [Pseudonocardia sp. P1]
          Length = 752

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 49/140 (35%), Gaps = 15/140 (10%)

Query: 281 AMDIYSVDLQSNATERL---TNTLFINISASYSP-------DSSQIVFESDREGKEQLYV 330
            +++  +D  +     L   T    I+ +            DS +I++ S R+G   LY+
Sbjct: 302 TLELRRLDPDTGELTTLVGETGETRIDPAPQLGETPMVHVLDSGEILWWSQRDGWGHLYL 361

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK---FSGEKF--AIGVMKKDGSQERL 385
             ++G+   R++              +   + F       G+ +   I  +  DG+    
Sbjct: 362 YDADGTQAARVTSGPWVVRRVLWVDQEHRQVWFVATGLVDGDPYVRQICRIGLDGTGFTR 421

Query: 386 LVEDSNLQAPTWSPSGRSLI 405
           L +D         P G  ++
Sbjct: 422 LTDDDLDHDAVSPPEGGHIV 441



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 51/164 (31%), Gaps = 23/164 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYL--MDTRIDRAPKRIGNFRSMILAPRFSS-------- 267
            +S  +  V +  +   D   + L  +D         +G      + P            
Sbjct: 282 WWSGEKGDVVHVLHQSRDARTLELRRLDPDTGELTTLVGETGETRIDPA--PQLGETPMV 339

Query: 268 ---NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF---ESD 321
              +    L   Q+D    +Y  D       R+T+  ++     +     + V+      
Sbjct: 340 HVLDSGEILWWSQRDGWGHLYLYDADGTQAARVTSGPWVVRRVLWVDQEHRQVWFVATGL 399

Query: 322 REGKE---QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
            +G     Q+  +  +G+   R++ D      D V  P+G  I 
Sbjct: 400 VDGDPYVRQICRIGLDGTGFTRLTDDD--LDHDAVSPPEGGHIV 441


>gi|301114409|ref|XP_002998974.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262111068|gb|EEY69120.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 463

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 81/209 (38%), Gaps = 12/209 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           R+SP  + +A A        R+ + D    +  +R  +   +     +S + +  L +  
Sbjct: 11  RWSPCGRYLAAAC-----GNRLSIRDALSLQLVQRYSSVDEVQTL-VWSEDSELVLTASL 64

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +   + ++SV   ++ T +++  +   + A ++PD+  +V  SD +      V       
Sbjct: 65  RRAVVQLWSVQ-DASWTCKISEGVAGLVHARWTPDARHVVTVSDFQ--LHATVWSLEDPT 121

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL--LVEDSNLQAP 395
            +   +  + +     +S  G+ +A  +    K  IGV   +  +      ++  +    
Sbjct: 122 ARCSIRSPKLAADGLSFSRNGEFLAVVERHDCKDFIGVYSCESWELTTHFSIDSYDCVEI 181

Query: 396 TWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           +WSP   ++   R    +    LYS D  
Sbjct: 182 SWSPDDAAIA-VRDTHLEFRVLLYSPDGT 209



 Score = 41.5 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 67/194 (34%), Gaps = 8/194 (4%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +S + + V  A+        V L   +      +I    + ++  R++ + +  +     
Sbjct: 52  WSEDSELVLTASLRR---AVVQLWSVQDASWTCKISEGVAGLVHARWTPDARHVVTVSDF 108

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
                ++S++    A   + +        S+S +   +      + K+ + V      + 
Sbjct: 109 QLHATVWSLE-DPTARCSIRSPKLAADGLSFSRNGEFLAVVERHDCKDFIGVYSCESWEL 167

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQAP 395
                       +  WSP    IA  + +  +F + +   DG+   + +       L+  
Sbjct: 168 TTHFSIDSYDCVEISWSPDDAAIA-VRDTHLEFRVLLYSPDGTLLAKYQAYENALGLKTM 226

Query: 396 TWSPSGRSLIFSRK 409
           TWSPSG+ L     
Sbjct: 227 TWSPSGQFLALGSY 240


>gi|302541650|ref|ZP_07293992.1| LigA protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302459268|gb|EFL22361.1| LigA protein [Streptomyces himastatinicus ATCC 53653]
          Length = 381

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 47/322 (14%), Positives = 85/322 (26%), Gaps = 44/322 (13%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
           +P   R +AH   D+         GD      + +           L     D    RY 
Sbjct: 79  APDPDRVLAH--PDESPPRHLVAAGDLAVS-AYRTGETPEKAYDWYL----YDTGKQRYE 131

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                 +   P       K A          RV ++D R  +  + +           +S
Sbjct: 132 KTPWGALDVAP-----GMKAAAVLEKTLPTSRVGILDLRTGKVAQWVPLDHE-AGGVSWS 185

Query: 267 SNGKRALISV---------------QKDEAMDIYSVDLQSNAT--ERLTNTLFINISASY 309
            +G R  ++                        Y +D+++       L  ++       +
Sbjct: 186 PDGTRLAVTTYSGDPDVEATPANRETAPGRTGYYVIDIETGDKRYRPLPASIGGRSDLGW 245

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA-SYFDPVWSPQGDLIAFTKFSG 368
           S D +++    D       Y+   +   +   +   E     D   SP G    +    G
Sbjct: 246 SRDGTRLA---DPAPTRGPYLAYYDIQGRPAGTPPYEGLGATDAGRSPDGRY--YATGDG 300

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGS---KLYSIDLNG 425
               +    KD    R + +        W+   R L +    D  T     +L   D  G
Sbjct: 301 RTGEV----KDARTHRRVGDGFTGAPLAWTSDDRLLRWGDCGDDCTDDRYERLVLTDPEG 356

Query: 426 RNETLINT-PAYASDPQWVGFM 446
                +    A      W   +
Sbjct: 357 GTTVPLTGFRASEGHGAWEPLI 378


>gi|229005052|ref|ZP_04162776.1| Peptidase S9B, dipeptidylpeptidase IV domain protein [Bacillus
           mycoides Rock1-4]
 gi|228756154|gb|EEM05475.1| Peptidase S9B, dipeptidylpeptidase IV domain protein [Bacillus
           mycoides Rock1-4]
          Length = 507

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 52/161 (32%), Gaps = 27/161 (16%)

Query: 265 FSSNGKRALIS-VQKDEAMDIYSV-DLQSNATERL----------TN------TLFINIS 306
           ++++      + + +D     + V + ++   + L          T+         IN+ 
Sbjct: 26  WTNDSDFVYFTKMSRDYRPMQFVVANTKTGEIQTLLEEKSETFLFTDLYNIKSGKGINVQ 85

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEASYFDPVWSPQGDLIAFTK 365
             +    +  ++ S+R+G   LY+  S     K RI+              Q   + FT 
Sbjct: 86  --WLCHDNTFIWHSERDGWSHLYLYDSRTGRLKNRITSGSWTVRRLIGVDEQKSWVYFTA 143

Query: 366 ------FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
                        +  ++ DGS   LL  +        SP 
Sbjct: 144 SGREPGRDPYFQHLYRVRLDGSDLVLLTPEDAEHDVFISPD 184


>gi|284990079|ref|YP_003408633.1| prolyl oligopeptidase [Geodermatophilus obscurus DSM 43160]
 gi|284063324|gb|ADB74262.1| Prolyl oligopeptidase [Geodermatophilus obscurus DSM 43160]
          Length = 692

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 53/281 (18%), Positives = 96/281 (34%), Gaps = 46/281 (16%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEP-RFSPNQQKVAYATYDDEDIL------- 237
            G  ++ L V+D   A    L    D+  + P  + P  +++ Y      +++       
Sbjct: 144 GGDEESRLYVLDV--ATGEQLDGPIDRCRYSPVAWLPGGEELFYVRRLAPELVPADEEQF 201

Query: 238 --RVYLMDTRIDRAPKRI----GNFRSMILAPRFSSNGKRALISVQKDEAM--DIYSVDL 289
             RV+      D     +    G+  +     R S +G+  ++S     A   D++  DL
Sbjct: 202 HRRVWRHRVGTDADGDVLVHGEGSDPATYFGARTSRDGRWLVVSASVGTAPRDDVWLADL 261

Query: 290 Q-SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
               A   L   +    +A  + D  ++   SDR G  +  +  ++ +D    +   EA 
Sbjct: 262 ARDGALRELQVGVDAQTAAWVARDG-RLWLMSDR-GTPRWRLAVADPADPA--TWAPEAW 317

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE--DSNLQAPTWSPSGRSLIF 406
                 S  G L       G          DG  + L V   D+  +   W+  G     
Sbjct: 318 RDVVPQSDDGVLTDVALVDG---------PDGGLQVLAVHSVDATDRLSVWAADG----- 363

Query: 407 SRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWVGFMD 447
           S ++   T  +  S+         ++ P       WVGF D
Sbjct: 364 SGRQAEVTALRAGSVSG-------VSAPPEGGSTAWVGFTD 397


>gi|295657270|ref|XP_002789205.1| periodic tryptophan protein [Paracoccidioides brasiliensis Pb01]
 gi|226284452|gb|EEH40018.1| periodic tryptophan protein [Paracoccidioides brasiliensis Pb01]
          Length = 918

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 31/216 (14%), Positives = 72/216 (33%), Gaps = 18/216 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           +SP+ QK+  A  D +    + + D              S + A +FS  G   L +   
Sbjct: 339 YSPDGQKIITAADDGK----IKVWDINSGFCIVTFTEHTSGVTACQFSKRGN-VLFTASL 393

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           D ++  + + ++       T    ++ S   + D S  V  +       +++        
Sbjct: 394 DGSIRAWDL-IRYRNFRTFTAPSRLSFS-CLAVDPSGEVVCAGSLDSFDVHIWSVQTGQL 451

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
                  +       ++  G  +    +        +  +  + E  L   ++L +  + 
Sbjct: 452 LDQLSGHQGPVSSLSFASDGSHLVSGSWDHTVRVWSIFGRSQTSE-PLELQADLLSVAFR 510

Query: 399 PSGRSLIFSRKKDGDTGSKLYSID-------LNGRN 427
           P G+ +  +   DG      +S+D       ++GR 
Sbjct: 511 PDGKQIA-ASTLDGQLTF--WSVDDAVQVGGIDGRR 543



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 26/211 (12%), Positives = 77/211 (36%), Gaps = 16/211 (7%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
            + + +A+ +     +L V+   +      K+ G+  S+     +S +G++  I+   D 
Sbjct: 298 NSGEWIAFGSPKLGQLL-VWEWQSE-SYILKQQGHLDSINSL-VYSPDGQKI-ITAADDG 353

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
            + ++ ++         T       +  +S   + ++F +  +G  + + +     + + 
Sbjct: 354 KIKVWDIN-SGFCIVTFTEHTSGVTACQFSKRGN-VLFTASLDGSIRAWDL-IRYRNFRT 410

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWS 398
            +     S+      P G+++         F + +      Q   +L      + + +++
Sbjct: 411 FTAPSRLSFSCLAVDPSGEVVCAGSLD--SFDVHIWSVQTGQLLDQLSGHQGPVSSLSFA 468

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNET 429
             G  L+      G     +    + GR++T
Sbjct: 469 SDGSHLV-----SGSWDHTVRVWSIFGRSQT 494


>gi|255601007|ref|XP_002537584.1| conserved hypothetical protein [Ricinus communis]
 gi|223515834|gb|EEF24798.1| conserved hypothetical protein [Ricinus communis]
          Length = 199

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 22/148 (14%), Positives = 52/148 (35%), Gaps = 18/148 (12%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY---SPDSSQIVFESD 321
           FS +G+  L++ + D+ + +Y     +    R T  +           SPD  Q V   +
Sbjct: 18  FSPDGRELLVTNEGDDTVSVYR--TGTGKLVR-TVKMDKGSRPRGIKASPDGKQYVVTLE 74

Query: 322 REGKEQLYVMQSNGSDQKRI-SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
              K     +  +G+  K + + D +   +   + P+G  +       +   +     D 
Sbjct: 75  NTNKF----VVLDGATLKTLKTVDTKMGPYGVAFDPEGKHLLVAAARDKTLQVF----DA 126

Query: 381 SQERLLVE---DSNLQAPTWSPSGRSLI 405
                + +          +++P G  ++
Sbjct: 127 KTYEHVADAPVGQRCWHFSFTPDGSKVL 154


>gi|193599204|ref|XP_001946387.1| PREDICTED: WD repeat-containing protein 5-like [Acyrthosiphon
           pisum]
          Length = 318

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 35/209 (16%), Positives = 75/209 (35%), Gaps = 16/209 (7%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSM 259
            ++++        L   +FSPN + +A ++ D    I   Y        A  ++G     
Sbjct: 18  YSLKFTLAGHTMALSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKSIAGHKLGISDIS 77

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
             +        R L+S   D+ + ++ +   S   + L          +++P S+ I   
Sbjct: 78  WSSDS------RLLVSASDDKTLKVWELS-SSKCVKTLKGHSNYVFCCNFNPQSTLIASG 130

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     E + + +       +I            ++  G L+  + + G    I      
Sbjct: 131 SF---DESVRIWEVKSGKCLKILPAHSDPVSAVEFTRDGSLVVSSSYDG-LCRIW-DTAS 185

Query: 380 GSQERLLVEDSNLQAPT---WSPSGRSLI 405
           G   + LV+D N    +   +SP+G+ ++
Sbjct: 186 GQCLKTLVDDENRPPVSFVKFSPNGKYIL 214


>gi|168698429|ref|ZP_02730706.1| WD-40 repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 355

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 62/191 (32%), Gaps = 19/191 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+  K+A AT        V + D    +    +        A  +   G     SV 
Sbjct: 32  TWSPDGAKLAAATVSGP----VVVFDAHTGKPLHELKGNGFGTAAIAWQPGGSLLA-SVG 86

Query: 278 KDEAMDIYSVDLQSN-ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
           +D+ + ++  D  +    + L          ++ P    +   + ++ +     + S G 
Sbjct: 87  QDKVVRLW--DTATGVEVKALDAGAAWAEKVAWHPQGQFLAAAAGKKAR-----VWSAGG 139

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS--QERLLVEDSNLQA 394
           +  R    +  +  D  W P  + I    +     A             +LL    +  A
Sbjct: 140 ELVRELSAQAGTVMDLKWRPGTNHITLLAYG----AAATYDPFAGLEPVKLLSWKGSPLA 195

Query: 395 PTWSPSGRSLI 405
             WSP G+ L 
Sbjct: 196 MAWSPDGKILA 206


>gi|170027949|ref|XP_001841859.1| WD repeat protein 26 [Culex quinquefasciatus]
 gi|167868329|gb|EDS31712.1| WD repeat protein 26 [Culex quinquefasciatus]
          Length = 736

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 58/136 (42%), Gaps = 10/136 (7%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           ++       ++  +FSPN  ++A  + D+  I+        + +  K   N    +    
Sbjct: 388 HVLNDHSDEVWFCKFSPNGLRLATGSKDNTVIVWEVDPVKLVLKNKKIFENHTYGVSFIA 447

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN-TLFINIS---ASYSPDSSQIVFES 320
           +S + K  ++   +D   D++  D++    + +T  +   + S   A+++ D ++ V   
Sbjct: 448 WSPDSKYFIVCGPED-CPDLWIWDVE--QEKLVTKVSHSTDDSLTCAAFNKDGTRFVTGG 504

Query: 321 DREGKEQLYVMQSNGS 336
            R    Q Y++  +G+
Sbjct: 505 TRG---QFYLVDLDGT 517


>gi|149922249|ref|ZP_01910686.1| hypothetical protein PPSIR1_07375 [Plesiocystis pacifica SIR-1]
 gi|149816882|gb|EDM76368.1| hypothetical protein PPSIR1_07375 [Plesiocystis pacifica SIR-1]
          Length = 484

 Score = 44.2 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 46/257 (17%), Positives = 93/257 (36%), Gaps = 16/257 (6%)

Query: 192 SLCVMDRDGANIRY-LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
            L ++D D + +   +     Q L   RF+P+   V +  +D        L    +    
Sbjct: 145 QLWLLDFDHSELVAGVLVGEGQDLSLSRFTPDGGAVLWRDFDAGGGTPGPLW---MAPLE 201

Query: 251 KRIGNFRSMILAPR--FSSNGKRALISVQKDEAMDI--YSVDLQSNATERLTN-TLFINI 305
             +G  + +I AP   ++  G++  +    +   D   + + L   +   +   +L  N 
Sbjct: 202 PALGPSQVLIDAPVRVYTFFGEQLFVRAFSEGFDDQESWLLPLADLSAAPVPGPSLAWNA 261

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTK 365
           + S+S D   + F S+++    +     + S+   +S  + A +   +  P+ D + +T 
Sbjct: 262 ATSFSADGRWLCF-SEQDTLSVIGFSGVDFSEPTVVSTPELAGWGCKL--PRADTLIYTM 318

Query: 366 FS-GEKFAIGVMKKDG---SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
                   + ++   G   +    LV  SNL     S  G  L F    D          
Sbjct: 319 GDIDVDTGVVMVDLSGPEPAAPVQLVSGSNLLNMRTSSDGERLYFVSAADDVYRLNYVEF 378

Query: 422 DLNGRNETLINTPAYAS 438
              G    L++T +Y  
Sbjct: 379 AGPGAPVELLSTSSYQG 395


>gi|326426631|gb|EGD72201.1| hypothetical protein PTSG_00223 [Salpingoeca sp. ATCC 50818]
          Length = 587

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 29/201 (14%), Positives = 66/201 (32%), Gaps = 15/201 (7%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ++V +G    +L + + D     +        +    F P  + +A  + D      + +
Sbjct: 71  QTVAAGSSSGTLKIWNIDQPKKSHTLTGHKSNIRCLEFHPFGEFIASGSLDT----NLKI 126

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
            D +     +        I   RFS +G   ++S  +D A+ ++ +              
Sbjct: 127 WDIKRKGCIQTYKGHTDAINCLRFSPDGHW-VVSGSEDGAIKLWDL-TAGKLITEFREHR 184

Query: 302 FINISASYSPDSSQIVFES-DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
               S  + P+   +   S DR     +             S  + +      +S  G  
Sbjct: 185 AGITSLEFHPNEFLLASGSADRT----VKFWDLESFKCVSTSHPEASPIKCLAFSDDGQA 240

Query: 361 IAFTKFSGEKFAIGVMKKDGS 381
           I    +SG   +  +++ +G+
Sbjct: 241 I----YSGGNDSFRLVRWEGT 257


>gi|323136697|ref|ZP_08071778.1| Oligopeptidase B [Methylocystis sp. ATCC 49242]
 gi|322398014|gb|EFY00535.1| Oligopeptidase B [Methylocystis sp. ATCC 49242]
          Length = 710

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 50/152 (32%), Gaps = 16/152 (10%)

Query: 304 NISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVW-------- 354
           + S     D     +   REG EQ LY         + +  D EA   +  +        
Sbjct: 100 DDSDVPDKDGHYAYYGRFREGGEQPLYCRTPREGGAEELLLDGEALAENHDFFDIGEMTH 159

Query: 355 SPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP    +A++      E +AI         +R  V      +  WS   ++  + R  + 
Sbjct: 160 SPDHAQLAWSVDDMGSELYAIRTRPLTDGVDRPDVVIDTDGSLVWSADSKAFYYVRVDEN 219

Query: 413 DTGSKLYS--IDLNGRNETLINTPAYASDPQW 442
              +++Y   I  +   + L+       D  W
Sbjct: 220 HRTAQVYRHEIGADPAQDRLV---VEERDGAW 248


>gi|307330329|ref|ZP_07609475.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Streptomyces violaceusniger Tu 4113]
 gi|306884025|gb|EFN15065.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Streptomyces violaceusniger Tu 4113]
          Length = 680

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 45/294 (15%), Positives = 97/294 (32%), Gaps = 45/294 (15%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDG------ANIRYLTPSRDQILFEPRF 219
           +  E+G+    +   +    + + +  +  +  DG      A +R LT  R + L  PR 
Sbjct: 133 LRPERGEVWCVLEEFTGEGPTDVRR-VIAAVPLDGSAAEDRAAVRELTDDRHRFLTGPRL 191

Query: 220 SPNQQKVAYATYDDE----DILRVYLMDTRIDRA----PKRIGNFRSMILAPRFSSNGKR 271
           SP+ ++VA+  +D      D   V L D   D +       +G     +    ++ +G  
Sbjct: 192 SPDGRRVAWIVWDHPRMPWDGTEVMLADVAEDGSFTGARAVLGGPDESVAQIEWAEDGAL 251

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
              +  +    +++          RL     +  +  ++     +               
Sbjct: 252 LA-ATDRTGWWNLH----------RLEPPAEVAGAREWARAGRPVALC------------ 288

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
                +           +F P+    G LIA     G   A+G++         +     
Sbjct: 289 -PREEEFGGPLWKLGHRWFAPLA---GGLIAVLHGRGAA-ALGILDPRTGGTADVPGPWT 343

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWVG 444
              PT + +G  ++        +G ++  +D+  GR+  + N      DP +  
Sbjct: 344 EWEPTLAVNGTRVVGVAASP-HSGHEVMELDVCTGRSRVIGNAHTDPVDPAYYP 396



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 37/248 (14%), Positives = 80/248 (32%), Gaps = 34/248 (13%)

Query: 195 VMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIG 254
           V   DG      T   +     PR     ++         D   V ++    +   K +G
Sbjct: 16  VASYDGHPEYVGTVGEEVWWTAPRPGEGGRRALI--RRRTDGAEVPVLAPPWNVRSKVMG 73

Query: 255 NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL-QSNATERLTNTLFIN-----ISAS 308
            +  M  A    ++G   +     D+ + ++  D     A   LT    +      +   
Sbjct: 74  -YGGMPWAAVDRASGPLVVFVHFADQRLYVHEPDAPAGGAPRPLTPLSAVGEGLRWVDPV 132

Query: 309 YSPDSSQIV-----FESD--REGKEQLYVMQSNGSDQ------KRISQDKEASYFDPVWS 355
             P+  ++      F  +   + +  +  +  +GS        + ++ D+      P  S
Sbjct: 133 LRPERGEVWCVLEEFTGEGPTDVRRVIAAVPLDGSAAEDRAAVRELTDDRHRFLTGPRLS 192

Query: 356 PQGDLIAFT-------KFSGEKFAIGVMKKDGS--QERLLVEDSNLQAPT--WSPSGRSL 404
           P G  +A+         + G +  +  + +DGS    R ++   +       W+  G  L
Sbjct: 193 PDGRRVAWIVWDHPRMPWDGTEVMLADVAEDGSFTGARAVLGGPDESVAQIEWAEDGALL 252

Query: 405 IFSRKKDG 412
             +  + G
Sbjct: 253 A-ATDRTG 259


>gi|302835507|ref|XP_002949315.1| hypothetical protein VOLCADRAFT_117135 [Volvox carteri f.
           nagariensis]
 gi|300265617|gb|EFJ49808.1| hypothetical protein VOLCADRAFT_117135 [Volvox carteri f.
           nagariensis]
          Length = 978

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 17/122 (13%), Positives = 46/122 (37%), Gaps = 15/122 (12%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +R      +  + +  ++P+ +++A A+ D+    RV + DT      + +      +  
Sbjct: 119 LRLRLRGHEVNVADVAWAPDSRRLATASVDN----RVKIWDTTSGVCLRTLEGHIGHVKG 174

Query: 263 PRFSS-NGKRALISVQKDEAMDIYSVDLQSNATERLTNTL------FINISASYSPDSSQ 315
             +   +     ++ Q D  + ++ ++       RL +           +  S+SPD   
Sbjct: 175 LAWDPFD---VYLASQGDREVIVWRLE-DGQQACRLEDPFVGAPIVSFALRPSWSPDGQV 230

Query: 316 IV 317
           + 
Sbjct: 231 LA 232



 Score = 39.6 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 33/232 (14%), Positives = 69/232 (29%), Gaps = 40/232 (17%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA--- 262
                   +       + +++A    D +  +R++ M   I  + +   +    + A   
Sbjct: 9   WIHHGGAAILGIDIDASGERLATCGSDKK--IRIWSMRPVISESAELNASVPKQLAALSE 66

Query: 263 -------PRFSSNGKRALISVQKDEAMDIYSVDLQSNATE---------------RLTNT 300
                   RF+  G+         +A      + + +A                 RL   
Sbjct: 67  STTPVNCVRFAPAGRLLAAGSDDSDAYVFELREGRGSAVFGSGEAANLENWKLRLRLRGH 126

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
                  +++PDS ++   S      ++ +  +      R  +          W P    
Sbjct: 127 EVNVADVAWAPDSRRLATASV---DNRVKIWDTTSGVCLRTLEGHIGHVKGLAWDP---F 180

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVED-------SNLQAPTWSPSGRSLI 405
             +    G++  I    +DG Q   L +        S    P+WSP G+ L 
Sbjct: 181 DVYLASQGDREVIVWRLEDGQQACRLEDPFVGAPIVSFALRPSWSPDGQVLA 232


>gi|254420865|ref|ZP_05034589.1| peptidase, S9A/B/C family, catalytic domain protein [Brevundimonas
           sp. BAL3]
 gi|196187042|gb|EDX82018.1| peptidase, S9A/B/C family, catalytic domain protein [Brevundimonas
           sp. BAL3]
          Length = 740

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 24/163 (14%), Positives = 48/163 (29%), Gaps = 27/163 (16%)

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ-----KRISQD-------------- 344
           + S+  +PD     +   R G +    M+           + ++++              
Sbjct: 115 DDSSVPAPDGDWNYYVEYRTGDQHPRYMRVERQGAWMVDGQPVTKNFVVAPTPQLLLDAN 174

Query: 345 ------KEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
                   +       SP   L A+ +     E   I V      +    V DS      
Sbjct: 175 ELAKGKAYSEVSAASHSPDHSLFAYAEDAQGSEVHKIYVKDLATGEVLPDVIDSATGDFV 234

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           +SP  + + ++ + D     K++     G   TL+   A    
Sbjct: 235 FSPDSQWIFWTNRDDNGRPDKIFRRPARGGEATLVYEEADDGM 277


>gi|167035100|ref|YP_001670331.1| oligopeptidase B [Pseudomonas putida GB-1]
 gi|166861588|gb|ABY99995.1| Oligopeptidase B [Pseudomonas putida GB-1]
          Length = 680

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 51/165 (30%), Gaps = 11/165 (6%)

Query: 265 FSSNGKRALISV--QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE--S 320
            S + +    S+    DE   +Y  DL S +   L      + S +++ DS  + F    
Sbjct: 132 VSPDHRLLAYSLDTSGDEIYTLYVKDLASGSVTPLPFD-DCDGSLTWANDSQTLFFAELD 190

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIGVMKKD 379
           D     +L+         + + ++ +  +F   + +     +     S       V+  +
Sbjct: 191 DTHRPWRLHRHTLGTDAVQTVFEEPDGRFFLHCYRTSSERQLVLLLNSKTTSEAWVLDAE 250

Query: 380 GSQERLLVEDSNLQAPTWSP-----SGRSLIFSRKKDGDTGSKLY 419
             Q         ++   + P      G    F R         LY
Sbjct: 251 TPQAPFTCLAPRVEGHEYFPDHGQLDGEWRWFIRTNQDGINFALY 295



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 30/86 (34%), Gaps = 2/86 (2%)

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK--FAIGVMKKDGSQERLLVEDSNLQA 394
           D   ++     S      SP   L+A++  +     + + V          L  D    +
Sbjct: 115 DPNALANGGFLSLGAFNVSPDHRLLAYSLDTSGDEIYTLYVKDLASGSVTPLPFDDCDGS 174

Query: 395 PTWSPSGRSLIFSRKKDGDTGSKLYS 420
            TW+   ++L F+   D     +L+ 
Sbjct: 175 LTWANDSQTLFFAELDDTHRPWRLHR 200


>gi|159026529|emb|CAO90508.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 640

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 65/181 (35%), Gaps = 21/181 (11%)

Query: 277 QKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ-----LYVM 331
            ++    I S+D+ +   + L +      S   S + S++ + S            L V 
Sbjct: 143 DREPVNSIVSIDVDTGEIKTLVSGDDFYTSPRLSANGSRLAWISWNHPNMPWDSSFLSVA 202

Query: 332 QSNG---SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
             N    S+ + I+  +  S  +P WS   + + FT    + +       D   E +L  
Sbjct: 203 DINNLYLSNIRVIAGGENKSVCEPRWSVD-EQLYFTSDRNDFWNFYCFNHDEQIEPVLEP 261

Query: 389 -DSNLQAPTW----SPSG----RSLIFSRKKDGDTGSKLYSID-LNGRNETLINTPAYAS 438
            ++    P W    S  G      +I S  KDG     L SID +N   + +I      S
Sbjct: 262 IEAEFAYPHWVFGLSNYGFASESQIICSYTKDGRW--HLGSIDTVNREFQEIITDDTNIS 319

Query: 439 D 439
            
Sbjct: 320 S 320



 Score = 43.1 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 66/185 (35%), Gaps = 21/185 (11%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD-----EAM 282
           ++  D E +  +  +D         + +      +PR S+NG R             ++ 
Sbjct: 139 HSQKDREPVNSIVSIDVDTGEIKTLV-SGDDFYTSPRLSANGSRLAWISWNHPNMPWDSS 197

Query: 283 DIYSVDLQS---NATERLTNTLFINI-SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
            +   D+ +   +    +      ++    +S D  Q+ F SDR      Y    +    
Sbjct: 198 FLSVADINNLYLSNIRVIAGGENKSVCEPRWSVD-EQLYFTSDRNDFWNFYCFNHD-EQI 255

Query: 339 KRISQDKEASYFDPVW----SPQG----DLIAFTKFSGEKFAIGVMKKDGSQER-LLVED 389
           + + +  EA +  P W    S  G      I  +     ++ +G +     + + ++ +D
Sbjct: 256 EPVLEPIEAEFAYPHWVFGLSNYGFASESQIICSYTKDGRWHLGSIDTVNREFQEIITDD 315

Query: 390 SNLQA 394
           +N+ +
Sbjct: 316 TNISS 320


>gi|145353453|ref|XP_001421027.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581263|gb|ABO99320.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 495

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 60/157 (38%), Gaps = 19/157 (12%)

Query: 182 ESVVSGIIKNSLCVM-DRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           E +VSG    ++ +                 Q++    FSP+ +  A A++D      V 
Sbjct: 352 ERLVSGSDDYTMFMWEPSTTKTPLQRLTGHQQLINHVLFSPDGRYFASASFDKG----VK 407

Query: 241 LMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATER- 296
           L D    +    I +FR  + A     +S++  R L+S  KD  M ++  D +    +  
Sbjct: 408 LWDGLTGKF---ITSFRGHVGAVYQLAWSAD-SRLLMSASKDSTMKVW--DARLKKLKED 461

Query: 297 LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS 333
           L        +  +SP  ++        GK+++  +  
Sbjct: 462 LPGHADEVYAVDWSPMGTKAA----SGGKDKMLRLWM 494


>gi|115373228|ref|ZP_01460529.1| WD-repeat protein, putative [Stigmatella aurantiaca DW4/3-1]
 gi|115369829|gb|EAU68763.1| WD-repeat protein, putative [Stigmatella aurantiaca DW4/3-1]
          Length = 668

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 66/175 (37%), Gaps = 10/175 (5%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAP-RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           LMDTR  +  K   N +   +A    S +GK    S  +  ++ ++ +      ++ L +
Sbjct: 357 LMDTRNGQWFKLALNGQVSAIAALVVSPDGKHVA-SASQSASVRLWGM--AGGTSQELAS 413

Query: 300 TLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                  A  +S D  +++  S R+G  +L+          RI     A       SP G
Sbjct: 414 GREPPPVAVGFSQDGQRLLSAS-RDGVVRLW--NPREPASGRILVKLPAGPTVLATSPAG 470

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT-WSPSGRSLIFSRKKDG 412
              A    S     +  ++++    R   E      P  +S  G+ L  +R++ G
Sbjct: 471 PF-AVLSGSDGVLRLWNLEEEKEVRRYGEEGGAAYYPVXFSADGKRLFAAREEHG 524



 Score = 43.9 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 88/240 (36%), Gaps = 20/240 (8%)

Query: 184 VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           V S     S+ +    G   + L   R+       FS + Q++  A+ D      V L +
Sbjct: 389 VASASQSASVRLWGMAGGTSQELASGREPPPVAVGFSQDGQRLLSASRDG----VVRLWN 444

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
            R   + + +    +       S  G  A++S   D  + +++++ +     R       
Sbjct: 445 PREPASGRILVKLPAGPTVLATSPAGPFAVLSGS-DGVLRLWNLE-EEKEVRRYGEEGGA 502

Query: 304 NISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
                 +S D  ++ F +  E    ++ +++ G   KR+       Y    ++  G+++A
Sbjct: 503 AYYPVXFSADGKRL-FAAREEHGVDVWEVET-GQQVKRLEPSG---YEVTSFAASGEVVA 557

Query: 363 FTKFSGEKFAIGVMKKDGSQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
                G    I + K    +   RL   +  ++  + S  G+ ++       D+  +L+ 
Sbjct: 558 AGTRDG---HIQLWKAQTLEPLVRLSGHEYGIRTVSLSGDGKRVL---SVGEDSTVRLWD 611



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 34/233 (14%), Positives = 73/233 (31%), Gaps = 20/233 (8%)

Query: 129 RLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGI 188
           R++ V    +       +     R++  +  +  Y  +       N R+ F       G 
Sbjct: 96  RVFGVTGGGRFFAWSLRT-----RRLI-SYRNYEYDRLAAAALSSNLRLAFARSLDGGG- 148

Query: 189 IKNSLCVMDR-DGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
              S+ + D  DG  +  L    D  + +   S +   +A   Y        +L D    
Sbjct: 149 ---SIEIFDASDGTQLHALQGPEDSDIEKIALSGDGAWLAAIPYKGPP----WLWDLSGK 201

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
              +R+   +  +LA   S +G R  ++  +D  + +++        + L       +S 
Sbjct: 202 PRVRRLRGAKGSVLAVAVSEDGTR-TVAAGEDGFVYVWN-SRTGRLLKTLRGGKRNMVSV 259

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           + S D   ++  S+     Q  +      +     +           S  G  
Sbjct: 260 AVSGDGRWVLAGSE---DAQARLWDLRTGNLVWSMEGNAIPIESVALSRDGTR 309


>gi|18399975|ref|NP_566453.1| WD-40 repeat family protein [Arabidopsis thaliana]
 gi|15081811|gb|AAK82560.1| AT3g13340/MDC11_13 [Arabidopsis thaliana]
 gi|22655036|gb|AAM98109.1| At3g13340/MDC11_13 [Arabidopsis thaliana]
 gi|332641814|gb|AEE75335.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
 gi|332641815|gb|AEE75336.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
          Length = 447

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 52/169 (30%), Gaps = 11/169 (6%)

Query: 191 NSLCVMDRDGANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           N   V D D    + +   R    +     SP+ + +A       D     ++D    + 
Sbjct: 256 NDCGVRDFDMERYQLVKHFRFPWPVNHASLSPDGKLLAIV----GDNPEGLIVDPNTGKT 311

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            + +        A  +  +G     S   +D+   ++ +   S +   L   L    S  
Sbjct: 312 LETLSGHLDFSFASAWHPDG--VTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIR 369

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           Y+ D   +      E  + ++V   +   +     D         +SP 
Sbjct: 370 YTSDGKYMAMA---EPADFVHVYDVSNGYETEQEIDFFGEISGISFSPD 415


>gi|1346110|sp|P49026|GBLP_TOBAC RecName: Full=Guanine nucleotide-binding protein subunit beta-like
           protein
 gi|402538|dbj|BAA04478.1| G protein beta subunit-like protein [Nicotiana tabacum]
          Length = 326

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 41/271 (15%), Positives = 89/271 (32%), Gaps = 41/271 (15%)

Query: 121 KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFV 180
                 E RLWD++       ++F         +A ++ +         +    SR   +
Sbjct: 81  SGSWDGELRLWDLQAGT--TARRFVGHTKDVLSVAFSVDN--------RQIVSASRDKSI 130

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
                 G  K ++    +DG        S    +   RFSPN  +    +   +  ++++
Sbjct: 131 RLWNTLGECKYTI----QDG-------DSHSDWVSCVRFSPNNLQPTIVSGSWDRTVKIW 179

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +     R    +      +  P  S +G     S  KD  + ++ +  +      L  +
Sbjct: 180 NLTNCKLRLT--LAGHTGYVNTPAVSPDGSLCA-SGGKDGVILLWDL-AEGKKLYSL-ES 234

Query: 301 LFINISASYSPDSSQIVFES-------DREGKEQLYVMQSNGSDQKRISQDKEAS----- 348
             I  S  +SP+   +   +       D E K  +  ++ +   +  +S +  AS     
Sbjct: 235 GSIIHSLCFSPNRYWLCAATESSIKIWDLESKSIVDDLKVDLKQESEMSSEGTASGKNKV 294

Query: 349 --YFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
                  WS  G  + F+ ++     +  + 
Sbjct: 295 IYCTSLSWSADGSTL-FSGYTDGLIRVWGID 324



 Score = 40.8 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 28/188 (14%), Positives = 58/188 (30%), Gaps = 14/188 (7%)

Query: 222 NQQKVAYATYDDEDI--LRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +   +   +  D+ I    +     +     +R+      +     SS+G    +S   D
Sbjct: 27  DNSDMIVTSSRDKSIIVWSITKDGPQYGVPRRRLTGHGHFVQDVVLSSDG-MFALSGSWD 85

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
             + ++ +        R        +S ++S D+ QIV  S     + + +  + G  + 
Sbjct: 86  GELRLWDLQA-GTTARRFVGHTKDVLSVAFSVDNRQIVSASR---DKSIRLWNTLGECKY 141

Query: 340 RISQDKEASYF--DPVWSPQG-DLIAFTKFSGEKFAIGVMKKDGSQERLLV--EDSNLQA 394
            I      S +     +SP        +        I        + RL +      +  
Sbjct: 142 TIQDGDSHSDWVSCVRFSPNNLQPTIVSGSWDRTVKIW--NLTNCKLRLTLAGHTGYVNT 199

Query: 395 PTWSPSGR 402
           P  SP G 
Sbjct: 200 PAVSPDGS 207


>gi|327286318|ref|XP_003227877.1| PREDICTED: aladin-like [Anolis carolinensis]
          Length = 524

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 30/212 (14%), Positives = 70/212 (33%), Gaps = 19/212 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRAL---- 273
            + P+  K A A  D  D +RVY  ++     P      +  + +  +       L    
Sbjct: 158 AWHPHTSKFAVALLD--DSIRVYNANSAT--VPILKHRLQRNVASMAWKPLCASILAVAC 213

Query: 274 --ISVQKDEAMDIYSVDLQSNATERLTN-TLFINISASYSPDSSQIVFESDREGKEQLYV 330
               +         S    S   + L++       S +++P    ++  S  +    + V
Sbjct: 214 HSCVLVWHLDPTSLSTRPSSGCAQVLSHPGHSPITSLAWAPSGGLLLSASPVD--TAMLV 271

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS 390
              +  +  ++            WS +G  +         F +  ++    ++   ++  
Sbjct: 272 WDVSTENCIQLQWFGGGGVTYLAWSSEGSKVL-AATPSAVFRVWEVQMWTCEKWPTIKGP 330

Query: 391 NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
             +   WSP G  L+F+     +  S +Y++ 
Sbjct: 331 -CRTGCWSPDGSRLLFTV----EGESVIYTLS 357



 Score = 41.2 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 19/205 (9%)

Query: 193 LCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKR 252
           + V D    N   L       +    +S    KV  AT     + RV+ +        ++
Sbjct: 269 MLVWDVSTENCIQLQWFGGGGVTYLAWSSEGSKVLAAT--PSAVFRVWEVQMWT---CEK 323

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL---QSNATERLTNTLFINISASY 309
               +       +S +G R L +V+      IY++           ++  +   +I A  
Sbjct: 324 WPTIKGPCRTGCWSPDGSRLLFTVE--GESVIYTLSFLEYSGEQKGKVGGSKTASIVADL 381

Query: 310 SPDSSQIVFESDR-EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI--AFTKF 366
           S  + + +F  +R  G+    V   +G     I + K         SP+   I   F   
Sbjct: 382 SETTFETLFGEERIGGEVHSMVWDPSGERLAVIIKGKMHIRSCD--SPKNQTIIAVFRTR 439

Query: 367 SGEKFAI----GVMKKDGSQERLLV 387
           +   F +     +  +DG+Q +L+V
Sbjct: 440 NSPVFELLPCGFLRGEDGAQPQLVV 464


>gi|319784936|ref|YP_004144412.1| 6-phosphogluconolactonase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170824|gb|ADV14362.1| 6-phosphogluconolactonase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 365

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 43/140 (30%), Gaps = 16/140 (11%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS---------YSPDSS 314
               NG+   +  + D  +   ++D  +     +     +   A           SPD  
Sbjct: 216 ALHPNGRFVFVMNELDSTIVSMTLDEATGKLSIIDAKPAVPAEARDSNHCADIQISPDG- 274

Query: 315 QIVFESDREGKEQ-LYVMQSNGSDQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           + V+ S+R      +  +         +       A+  +   +P G  +     +G++ 
Sbjct: 275 RFVYGSNRGHDSVVIMAVDQQTGSLSLVGYIPCGGATPRNLALTPSGGHLFSANQNGDRI 334

Query: 372 AIGVMKKDGSQERLLVEDSN 391
           +I     D     +L +   
Sbjct: 335 SIFARDADSG---ILTDTGR 351


>gi|301597553|ref|ZP_07242561.1| SMP-30/Gluconolaconase/LRE-like region family protein
           [Acinetobacter baumannii AB059]
          Length = 163

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 6/103 (5%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
              D   +++ N  +   +  +S +G +   +      +  Y  DL++      T    I
Sbjct: 1   LDADYKIEKLENNINTSNSICWSPDGAKLYFADTWQGEIWSYDYDLETGQISNKTIFCKI 60

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKE 346
           + S   S D S +    DREG   L+  +       R   D +
Sbjct: 61  DTSDGGSADGSTV----DREGY--LWNAKVYSGQLVRYRPDGQ 97


>gi|299754264|ref|XP_002911966.1| polyadenylation factor subunit 2 [Coprinopsis cinerea okayama7#130]
 gi|298410676|gb|EFI28472.1| polyadenylation factor subunit 2 [Coprinopsis cinerea okayama7#130]
          Length = 694

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 36/197 (18%), Positives = 66/197 (33%), Gaps = 13/197 (6%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++P  +++   +   E      L +         +    + I A RF+ +G     S  
Sbjct: 153 TWTPEARRILTGSTSGEFT----LWNGLTFNFETILQAHDTAITAMRFTHSGNYLA-STD 207

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINI--SASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           K   +  +  ++ +    + TN+         S+SPD  + V  SD      L +     
Sbjct: 208 KSGVIKYFEPNMNNLTAWQGTNSGNREAIRGLSFSPDDQRFVTASD---DSSLRIWSFKE 264

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQA 394
           S  + +            W P   LI     S +        + G+    L +  N +QA
Sbjct: 265 SRGENVLSGHGWDVKCVEWHPTKGLIV--SGSKDSSVKFWDPRTGTCLSTLHQHKNTIQA 322

Query: 395 PTWSPSGRSLIFSRKKD 411
             WSP+G  L    +  
Sbjct: 323 LAWSPNGNLLATGSRDQ 339



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/189 (14%), Positives = 61/189 (32%), Gaps = 10/189 (5%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +  +++G       + +    N   +  + D  +   RF+ +   +A     D+  +  Y
Sbjct: 158 ARRILTGSTSGEFTLWNGLTFNFETILQAHDTAITAMRFTHSGNYLAST---DKSGVIKY 214

Query: 241 LMDTRIDRAPKRIGNFRS--MILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT 298
                 +    +  N  +   I    FS + +R  ++   D ++ I+S   +S     L+
Sbjct: 215 FEPNMNNLTAWQGTNSGNREAIRGLSFSPDDQR-FVTASDDSSLRIWSF-KESRGENVLS 272

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              +      + P    IV  S       +                 + +     WSP G
Sbjct: 273 GHGWDVKCVEWHPTKGLIVSGSK---DSSVKFWDPRTGTCLSTLHQHKNTIQALAWSPNG 329

Query: 359 DLIAFTKFS 367
           +L+A     
Sbjct: 330 NLLATGSRD 338


>gi|269973824|emb|CBE66798.1| CG3004-PA [Drosophila ananassae]
 gi|269973826|emb|CBE66799.1| CG3004-PA [Drosophila ananassae]
          Length = 312

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 11/151 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    S+ + D        + P  D  + +   SP+ + +A    +++    ++ + +  
Sbjct: 139 GSQNGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA--AANNKGNCYIWSLTSSP 196

Query: 247 D------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           D      R  K+I      IL  +FS +  R L++   D    I++ +        L   
Sbjct: 197 DQKMSTLRPTKKIPAHSRYILRCKFSPD-SRLLLTTSGDGTACIWNTE-DFTKWRELCIE 254

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVM 331
                 A++S DS  + F +  +G  +L+ +
Sbjct: 255 NCWVWDAAFSADSKWL-FTASSDGVARLWKL 284



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 49/132 (37%), Gaps = 16/132 (12%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-------MK 377
              +++        +RI  + +AS  D   SP G  +A     G  +   +       M 
Sbjct: 142 NGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSSPDQKMS 201

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------I 431
                +++      +    +SP  R L+ +    GD  + +++ +   +   L      +
Sbjct: 202 TLRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIWNTEDFTKWRELCIENCWV 258

Query: 432 NTPAYASDPQWV 443
              A+++D +W+
Sbjct: 259 WDAAFSADSKWL 270



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 12/144 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------ 291
            V+L D + ++  + +    + I     S +G+    +        I+S+          
Sbjct: 144 SVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA-AANNKGNCYIWSLTSSPDQKMST 202

Query: 292 -NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              T+++       +   +SPDS  ++  S   G     +  +    + R    +    +
Sbjct: 203 LRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIWNTEDFTKWRELCIENCWVW 259

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIG 374
           D  +S     + FT  S     + 
Sbjct: 260 DAAFSADSKWL-FTASSDGVARLW 282


>gi|269973820|emb|CBE66796.1| CG3004-PA [Drosophila ananassae]
          Length = 312

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 11/151 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    S+ + D        + P  D  + +   SP+ + +A    +++    ++ + +  
Sbjct: 139 GSQNGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA--AANNKGNCYIWSLTSSP 196

Query: 247 D------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           D      R  K+I      IL  +FS +  R L++   D    I++ +        L   
Sbjct: 197 DQKMSTLRPTKKIPAHSRYILRCKFSPD-SRLLLTTSGDGTACIWNTE-DFTKWRELCIE 254

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVM 331
                 A++S DS  + F +  +G  +L+ +
Sbjct: 255 NCWVWDAAFSADSKWL-FTASSDGVARLWKL 284



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 49/132 (37%), Gaps = 16/132 (12%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-------MK 377
              +++        +RI  + +AS  D   SP G  +A     G  +   +       M 
Sbjct: 142 NGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSSPDQKMS 201

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------I 431
                +++      +    +SP  R L+ +    GD  + +++ +   +   L      +
Sbjct: 202 TLRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIWNTEDFTKWRELCIENCWV 258

Query: 432 NTPAYASDPQWV 443
              A+++D +W+
Sbjct: 259 WDAAFSADSKWL 270



 Score = 40.4 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 48/144 (33%), Gaps = 12/144 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------ 291
            V+L D + ++  + +    + I     S +G+    +        I+S+          
Sbjct: 144 SVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA-AANNKGNCYIWSLTSSPDQKMST 202

Query: 292 -NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              T+++       +   +SPDS  ++  S   G     +  +    + R    +    +
Sbjct: 203 LRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIWNTEDFTKWRELCIENCWVW 259

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIG 374
           D  +S     + FT  S     + 
Sbjct: 260 DAAFSADSKWL-FTASSDGVARLW 282


>gi|224131476|ref|XP_002321094.1| predicted protein [Populus trichocarpa]
 gi|222861867|gb|EEE99409.1| predicted protein [Populus trichocarpa]
          Length = 397

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 9/168 (5%)

Query: 191 NSLCVMDRDGANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           N   + + D    + L   R    +     SP+ + +        D L   L+D++  + 
Sbjct: 206 NDCGLREYDLETFQLLNHFRFPWPVNHTSMSPDSRLMTVV----GDNLDGLLVDSQSGKT 261

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              +        A  +  +G R   +  +D+   ++ +   S+ T  L   L    S  +
Sbjct: 262 VSTVEGHSDYSFASAWHPDG-RVFATGNQDKTCRVWDIRKLSSPTVILKGNLGAVRSIRF 320

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           S D  Q +F ++      +Y  + +   ++ I    E S      SP 
Sbjct: 321 SSDG-QFMFVAEPADFVHVYSTRDDYRKRQEIDFFGEIS--GVALSPD 365


>gi|92118885|ref|YP_578614.1| hypothetical protein Nham_3424 [Nitrobacter hamburgensis X14]
 gi|91801779|gb|ABE64154.1| WD-40 repeat-containing protein [Nitrobacter hamburgensis X14]
          Length = 338

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 79/205 (38%), Gaps = 22/205 (10%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
            +        K +       +    S +G+R +      +   + ++D++  ++  +T+ 
Sbjct: 46  TITLVSSDGEKVVVTVHGGAILSSVS-DGRRIV---TGGDDGKVVALDIKGESSVLVTDA 101

Query: 301 --LFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              +I+ + +  PD + + + +     +  +V    G D+   S +  +S     ++P+G
Sbjct: 102 KRRWID-NVAVHPDGT-LAWSA----GKTAFVRGLKGEDK---SLEAPSSVGGLAFAPKG 152

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
             +A   ++G   ++         ERL    S+L    +SP  R LI +  +    G +L
Sbjct: 153 LRLALAHYNG--VSLWFPNMTAKPERLEWAGSHLGV-AFSPDSRFLITTMHEPALHGWRL 209

Query: 419 YSIDLNGRNETLINTPAYASDPQWV 443
                + ++  +   P+      W 
Sbjct: 210 ----ADAQHMQMTGYPSRVKSMSWG 230


>gi|70954333|ref|XP_746218.1| guanine nucleotide-binding protein [Plasmodium chabaudi chabaudi]
 gi|56526758|emb|CAH77317.1| guanine nucleotide-binding protein, putative [Plasmodium chabaudi
           chabaudi]
          Length = 323

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 28/205 (13%), Positives = 68/205 (33%), Gaps = 14/205 (6%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            +       Q + +   S +       ++D+     + L D  +    +      S + +
Sbjct: 64  AKKSLTGHSQAISDVSISSDGLFALSGSWDN----SIRLWDLSLGETIRSFIGHTSDVFS 119

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQ---SNATERLTNTLFINISASYSPDSSQIVFE 319
             FS + ++ + S  +D+ + +++   Q   +   ++ T+ +       +SP   Q +  
Sbjct: 120 VSFSPDNRQIV-SASRDKTIKLWNTLAQCKYTITEQQHTDWI---TCVRFSPSPKQAIIV 175

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
           S     + + V      D  +  +           SP G L A +        +  +  +
Sbjct: 176 SC-GWDKLVKVWNLKNCDLNKNLEAHTGVLNTVTISPDGSLCA-SGGKDGVAKLWDVN-E 232

Query: 380 GSQERLLVEDSNLQAPTWSPSGRSL 404
           G     L     + +  +SP    L
Sbjct: 233 GKHLYSLETGCTINSLCFSPCDYWL 257


>gi|282857505|ref|ZP_06266735.1| tetratricopeptide repeat domain protein [Pyramidobacter piscolens
           W5455]
 gi|282584666|gb|EFB90004.1| tetratricopeptide repeat domain protein [Pyramidobacter piscolens
           W5455]
          Length = 471

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 21/209 (10%), Positives = 59/209 (28%), Gaps = 37/209 (17%)

Query: 11  LNMKINLCLLLVLIGGFFPTSIHAFVKVATNSANYSPVSIAFTKFVSIDELGGKVSEVVS 70
           +     LC   +L+ G   +   A +++  +        ++        ++   ++E+  
Sbjct: 1   MKRTRTLCAAALLVSGVLLSPAAAVIRIGVDRFRSGAPGVSP-------DVADALTEMFI 53

Query: 71  KDLQRSDVFNLISQDSF--------KQKITNPDSIPRFQDWNSLGAQVLVTGRVIKEGK- 121
            +L  S  F +  + +                      +     G + ++TG V +  + 
Sbjct: 54  TELSNSGSFQVYERTALEKVAREQRLSMSGLVSESTLVKVGRLAGVEWIITGAVTQSDEK 113

Query: 122 -------------------DRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDI 162
                                + ++ R  D          +   + +  R IA  + +  
Sbjct: 114 QTGGVLPIHGFGLAVGTNVGTVTLDVRTIDTTTGAITAALRKTGAAS--RAIAGAVYEGT 171

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKN 191
               T   G  +   +   +  V  + + 
Sbjct: 172 VIGTTQYGGVGSQAAMKAVKRTVRELERR 200


>gi|300771808|ref|ZP_07081679.1| probable acylaminoacyl-peptidase [Sphingobacterium spiritivorum
           ATCC 33861]
 gi|300761194|gb|EFK58019.1| probable acylaminoacyl-peptidase [Sphingobacterium spiritivorum
           ATCC 33861]
          Length = 929

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 25/180 (13%), Positives = 63/180 (35%), Gaps = 26/180 (14%)

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
               +         +  +D  + +   L+++       + S    +I ++ +   K+ LY
Sbjct: 360 NYLAVIYPAQGNRILPLID-DTFSRTYLSDSKNAEWILATSDYGRRIAYQWNTSIKQDLY 418

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK---FAIG---VMKKDGSQE 383
           V+ +    +K++ ++          SP G  I +          F I     +  +    
Sbjct: 419 VISTLNGQKKKVIENFSG---HADISPDGTHIVYFNLDNSNWYSFNIASGQTIHLN-KDL 474

Query: 384 RLLVEDSNLQAPT---------WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
            +   D +   P          WS  G+S+  + K D      +++  L+G+++++    
Sbjct: 475 PVNFSDEDNDMPAQAGSYGIAGWSADGKSVFINDKYD------IWNFALDGKDKSIATNG 528


>gi|226939702|ref|YP_002794775.1| hypothetical protein LHK_00773 [Laribacter hongkongensis HLHK9]
 gi|226714628|gb|ACO73766.1| Uncharacterized protein involved in formation of curli polymers
           [Laribacter hongkongensis HLHK9]
          Length = 223

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 59/139 (42%), Gaps = 25/139 (17%)

Query: 14  KINLCLLLVLIGGFF---PTSIHAFVKVATNSANYSP-----VSIAFTKFV--------- 56
           K+++  ++ L+G       T  H  V +   +A   P       +A  KF          
Sbjct: 3   KLSVIFVVGLMGAALGGCATESHQSVAIQQVAAASKPYAGPRFPVAVGKFDNRSSFMRGL 62

Query: 57  ---SIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVT 113
               +D LG +   ++   LQ+++ F ++ +++  +     ++  + Q     GA  +VT
Sbjct: 63  FSDGVDRLGSQAKTILIAHLQQTNRFAVLDRENLAE--ARQEAGIKQQALKLKGADYIVT 120

Query: 114 GRVIKEGKDRLRV-EFRLW 131
           G V + G  R  V +++L+
Sbjct: 121 GDVTEFG--RKEVGDYQLF 137


>gi|194769468|ref|XP_001966826.1| GF19074 [Drosophila ananassae]
 gi|190618347|gb|EDV33871.1| GF19074 [Drosophila ananassae]
          Length = 466

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 76/210 (36%), Gaps = 25/210 (11%)

Query: 219 FSP-NQQKVAYATYDDE-------DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS--N 268
           +   + + VA+  +  +       D++R+Y  + +     K     ++ I    +    +
Sbjct: 137 WMNSDVRYVAWHCHYFKLAVAGVDDVVRIYSKNVKQPIVLKSPT--QTDITCMAWRPLCS 194

Query: 269 G------KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR 322
           G      ++ L     D ++ +   +  S A    +N      S  ++ D + +   S  
Sbjct: 195 GEIVIGCRQGLCFWNVDNSLHLGRANAPSQAFRHPSNLP--ITSMQWNKDGNLLATSSI- 251

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
            G   + V Q +    + +++          WSP+ D + F       F +       + 
Sbjct: 252 -GDRSIIVWQVDNRTLQSLNRLGPPG-GLIKWSPENDWL-FAGTVDRVFRVWNCNNKWTT 308

Query: 383 ERLLVE-DSNLQAPTWSPSGRSLIFSRKKD 411
           ER +     ++Q   WSP GR L+F    +
Sbjct: 309 ERWVCGPGGHVQTACWSPCGRFLLFVSSTE 338


>gi|218245481|ref|YP_002370852.1| hypothetical protein PCC8801_0608 [Cyanothece sp. PCC 8801]
 gi|257058517|ref|YP_003136405.1| hypothetical protein Cyan8802_0624 [Cyanothece sp. PCC 8802]
 gi|218165959|gb|ACK64696.1| conserved hypothetical protein [Cyanothece sp. PCC 8801]
 gi|256588683|gb|ACU99569.1| hypothetical protein Cyan8802_0624 [Cyanothece sp. PCC 8802]
          Length = 484

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 30/218 (13%), Positives = 70/218 (32%), Gaps = 20/218 (9%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +  +  ++D        S N + +     + ++     L         + +G      
Sbjct: 217 GRLEPILDAKDYENLSFDLSNNGKNIVIWRTNWKNPADSGLWVIPDGEKTRSLGIPGGEF 276

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
           +    S +GK+  IS  +   + I  +   +   E L        S  +S D   I+   
Sbjct: 277 V---ISPDGKQVAIS--QRGGVGIVPLTPDAGTLEFL---SGYEKSLGFSQDGKYILLVK 328

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG------EKFA-- 372
           D +   +  V+ +      +          D  + P+     +   +        ++   
Sbjct: 329 DNQDYTRSLVLLNRKDKTTKDLFRTLYPIIDCEFEPREKKSLYCLKTDLIEEAEGQYREE 388

Query: 373 --IGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIF 406
             + V+  D + +  L+   N +    + SP G +L+F
Sbjct: 389 PFLSVITIDKTSDIPLLALPNYRDVQLSMSPDGVALLF 426


>gi|114603468|ref|XP_001156891.1| PREDICTED: THO complex 3 isoform 1 [Pan troglodytes]
          Length = 321

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 82/242 (33%), Gaps = 15/242 (6%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           SV SG  +  L + +   G +      +    +    +S + +++A  ++D      V+L
Sbjct: 26  SVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSFD--KTASVFL 83

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++                +    +  +     ++   D+ + I+  D+++       NT 
Sbjct: 84  LEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIW--DVRTTKCIATVNTK 141

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
             NI+  +SPD   I       G +   V   +    +  ++++     +   W+   ++
Sbjct: 142 GENINICWSPDGQTIAV-----GNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNM 196

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             F         I    +    + +    SN     + P G+   +      D    L+ 
Sbjct: 197 F-FLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGK---YFATGSADALVSLWD 252

Query: 421 ID 422
           +D
Sbjct: 253 VD 254



 Score = 41.9 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 74/214 (34%), Gaps = 23/214 (10%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R    S DQ+ + P  +P+     + T   +  +R++  D R  +    + N +   +
Sbjct: 94  NYRGHGDSVDQLCWHPS-NPD----LFVTASGDKTIRIW--DVRTTKCIATV-NTKGENI 145

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +G+   +  + D    I +   +S A E+     F     S++ D++       
Sbjct: 146 NICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ---FKFEVNEISWNNDNNMFFLT-- 200

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G   + ++        +      ++     + P G   A          + +   D  
Sbjct: 201 -NGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADA---LVSLWDVD-- 254

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKD 411
           +   +   S L  P    ++S  G+ L  + +  
Sbjct: 255 ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDH 288



 Score = 39.2 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 46/161 (28%), Gaps = 25/161 (15%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDT--RIDRAPKRIGNFRSMILAPRFSSNGKRAL---- 273
           S       + +        V  M    R     +      + + +  +S +G+R      
Sbjct: 16  SGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSF 75

Query: 274 ------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                   ++KD  +   +     ++ ++L             PD    +F     G + 
Sbjct: 76  DKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSN-------PD----LFV-TASGDKT 123

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + +     +     + + +    +  WSP G  IA      
Sbjct: 124 IRIWDVRTTKCIA-TVNTKGENINICWSPDGQTIAVGNKDD 163


>gi|115466678|ref|NP_001056938.1| Os06g0171900 [Oryza sativa Japonica Group]
 gi|55773651|dbj|BAD72190.1| putative GAMYB-binding protein [Oryza sativa Japonica Group]
 gi|55773689|dbj|BAD72272.1| putative GAMYB-binding protein [Oryza sativa Japonica Group]
 gi|113594978|dbj|BAF18852.1| Os06g0171900 [Oryza sativa Japonica Group]
 gi|194396095|gb|ACF60465.1| GAMYB-binding protein [Oryza sativa Japonica Group]
 gi|215704784|dbj|BAG94812.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218197678|gb|EEC80105.1| hypothetical protein OsI_21851 [Oryza sativa Indica Group]
          Length = 457

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 9/168 (5%)

Query: 191 NSLCVMDRDGANIRYLTP-SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           N   V + D    + L   S +  +     SP+++ +A       D     L+D+R  + 
Sbjct: 266 NDCGVREFDMETFQLLNHFSYNWPVNHTSVSPDRKLLAVV----GDDRDALLVDSRNGKV 321

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASY 309
              +        A  +  +G+    +  +D+   ++ V   S +   L   +       Y
Sbjct: 322 TSTLVGHLDYSFASAWHPDGRTFA-TGNQDKTCRVWDVRNLSTSLSVLRGNIGAIRCIRY 380

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           S D   ++F S+      +Y   ++   ++ I    E S      SP 
Sbjct: 381 SSDGQFMLF-SEPADFVHVYSAAADYKKRQEIDFFGEIS--GISLSPD 425



 Score = 39.6 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 56/176 (31%), Gaps = 14/176 (7%)

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI---SASYSPDSSQIVFESDR 322
           S++G   +     D  +  + +      T +L N    N      S SPD   +    D 
Sbjct: 254 SASGSLRVTVSNNDCGVREFDM-----ETFQLLNHFSYNWPVNHTSVSPDRKLLAVVGD- 307

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
             ++ L V   NG     +    + S F   W P G   A            V     S 
Sbjct: 308 -DRDALLVDSRNGKVTSTLVGHLDYS-FASAWHPDGRTFATGNQDKTCRVWDVRNLSTSL 365

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
             L      ++   +S  G+ ++FS   D      +YS   + +    I+     S
Sbjct: 366 SVLRGNIGAIRCIRYSSDGQFMLFSEPADF---VHVYSAAADYKKRQEIDFFGEIS 418


>gi|32471737|ref|NP_864730.1| X-Pro dipeptidyl-peptidase [Rhodopirellula baltica SH 1]
 gi|32397108|emb|CAD72412.1| X-Pro dipeptidyl-peptidase [Rhodopirellula baltica SH 1]
          Length = 1517

 Score = 44.2 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 57/156 (36%), Gaps = 17/156 (10%)

Query: 272 ALISVQKDEAMDIYSVDLQSNATERL----------TNTLFINISASYSPDSSQIVFESD 321
             ++ +  +   ++ VDL +     +          T         ++  DS+++++ S+
Sbjct: 388 VAVTERGHQRFRLFDVDLLTGKVTTVIDEQSETFIWTTHKTDLPRWTFLEDSNEVIWVSE 447

Query: 322 REGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLI------AFTKFSGEKFAIG 374
           ++G + LY++  +G S+ + I+  +           +  LI                   
Sbjct: 448 KDGFQHLYLVDLSGNSEIRPITSGEFVVRGIENIDEENRLIDLVVSGVHEGQDPYLKHYA 507

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKK 410
            +   G    LL + +     T+SP   SL+ +  +
Sbjct: 508 RVDFRGENFTLLTDANGTHTATFSPDRSSLVVTHSR 543



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 78/232 (33%), Gaps = 35/232 (15%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G  I    P   Q  ++ RF+   + +   T       R++ +D    +    I      
Sbjct: 361 GEPIELELPWMSQRFWDLRFAGPHRILVAVTERGHQRFRLFDVDLLTGKVTTVIDEQSET 420

Query: 260 IL-------APRFSS--NGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF------- 302
            +        PR++   +    +   +KD    +Y VDL  N+  R +T+  F       
Sbjct: 421 FIWTTHKTDLPRWTFLEDSNEVIWVSEKDGFQHLYLVDLSGNSEIRPITSGEFVVRGIEN 480

Query: 303 INISASYSPDSSQIVFESDREGKE----QLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           I+           +V     EG++        +   G +   ++ D   ++    +SP  
Sbjct: 481 IDEENRLID----LVVSGVHEGQDPYLKHYARVDFRGENFTLLT-DANGTHTA-TFSPDR 534

Query: 359 DLIAFTKFSGEKFAIG-VMKKDGSQERLLV------EDSNLQAP-TWSPSGR 402
             +  T    +   +  +   DG   + L       +D+ L  P  +S  GR
Sbjct: 535 SSLVVTHSRVDSLPVHELRSADGKLIQTLAKATVTPDDAKLNLPQVFSAKGR 586


>gi|302890301|ref|XP_003044035.1| hypothetical protein NECHADRAFT_91419 [Nectria haematococca mpVI
           77-13-4]
 gi|256724954|gb|EEU38322.1| hypothetical protein NECHADRAFT_91419 [Nectria haematococca mpVI
           77-13-4]
          Length = 1038

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 73/242 (30%), Gaps = 53/242 (21%)

Query: 220 SPNQQKVAYA----TYDDEDILRVYLMDTRIDRAPKRI---GNFRSMILAPRFSSNGKRA 272
           SP+ +++A A             VY  +      P+++    +    I + RFS NG+  
Sbjct: 26  SPDGKRLATAGGDGHVRIWSTEAVYNANNSDYNKPRQLCHMSHHLGTIHSVRFSPNGRYL 85

Query: 273 LISVQKDEAMDIYSVDLQSNAT------------------ERLTNTLFINISASYSPDSS 314
                  +   I    L                       +RL          ++S DSS
Sbjct: 86  A---SGADDKIICVYHLDKGPPAATFGTNEEPPVENWKTYKRLIGHDNDVQDLAWSYDSS 142

Query: 315 ---------QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA-FT 364
                    ++V  S     E+L  + ++ S  K I+ D    +F      +   I  FT
Sbjct: 143 ILVSVGLDSKVVVWSGHT-FEKLKTLPAHQSHVKGITFDPANKFFATASDDRTIKIFRFT 201

Query: 365 KFSGEKFAIGVMKKDGSQERLLVE----------DSNLQAPTWSPSGRSLIFSRKKDGDT 414
             +       ++        L              +  +  +WSP G  +  +   +G  
Sbjct: 202 SPAPNATQHDMVN----NFVLETTISAPFKSSPLTTYFRRCSWSPDGNHIAAANAVNGPV 257

Query: 415 GS 416
            S
Sbjct: 258 SS 259


>gi|120406862|ref|YP_956691.1| peptidase S9 prolyl oligopeptidase [Mycobacterium vanbaalenii
           PYR-1]
 gi|119959680|gb|ABM16685.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Mycobacterium vanbaalenii PYR-1]
          Length = 626

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 4/86 (4%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVM--KKDGSQERLLVED--SNLQAPTWS 398
                +      SP G  +AF     ++  + V   + D  + R +  D   ++    W+
Sbjct: 12  FFNPPTRAAATISPDGTRMAFLAPWKDRLNVWVQGLEPDADEPRCVTADDHRSVMHFEWT 71

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLN 424
              R LI+ +  +GD    ++ +DL+
Sbjct: 72  DDPRWLIYLQDTNGDENWHIHRVDLD 97



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 34/77 (44%), Gaps = 4/77 (5%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYV--MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
           A+ SPD +++ F +  + +  ++V  ++ +  + + ++ D   S     W+     + + 
Sbjct: 21  ATISPDGTRMAFLAPWKDRLNVWVQGLEPDADEPRCVTADDHRSVMHFEWTDDPRWLIYL 80

Query: 365 KFSGE--KFAIGVMKKD 379
           + +     + I  +  D
Sbjct: 81  QDTNGDENWHIHRVDLD 97


>gi|59802521|gb|AAX07504.1| WD-repeat protein [Gemmata sp. Wa1-1]
          Length = 448

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 90/253 (35%), Gaps = 28/253 (11%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPR------FSPNQQKVAYATYDDEDILRVYLMDTRID 247
            V   DG  +        + + +P       F+ +  ++A A         V L      
Sbjct: 127 WVAIADGNAVTVWDADTGKPIAQPARALWAAFNNDGTRLATAHNGT-----VQLWSVPDW 181

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
           +    +      + A  FS +G R L++   D ++  + ++ + +   R   ++ + ++A
Sbjct: 182 KPVAELRGHEQKVTAGAFSPDG-RVLVTGSLDCSVRTWDLETEKSIARR---SVPLPVAA 237

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
               D+ +++ E+  +    L+   + G+ + R+      +       P    +A +  +
Sbjct: 238 LIFADAGRVLVEAHAD--AVLFTDPTTGALRDRLDYPG-ITRPAVATGPDPRSVAVSGAN 294

Query: 368 GEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
           G    + V      +    +    + + A  +S  G+ L+      GD   +++  DL  
Sbjct: 295 G---EVVVWDLAKRRVTQTLRGHTALVSAVAFSRDGKQLV---SGGGDQTVRIW--DLAQ 346

Query: 426 RNETLINTPAYAS 438
           R E      A   
Sbjct: 347 RPEVRAIAEANGG 359



 Score = 37.3 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 57/185 (30%), Gaps = 31/185 (16%)

Query: 221 PNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDE 280
           P+ + VA +  + E    V + D    R  + +    +++ A  FS +GK+ +       
Sbjct: 283 PDPRSVAVSGANGE----VVVWDLAKRRVTQTLRGHTALVSAVAFSRDGKQLV---SGGG 335

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV----FESDREGKEQLYVMQSNGS 336
              +   DL      R         + S++P            ++      + +  + G 
Sbjct: 336 DQTVRIWDLAQRPEVRAIAEANGGGALSFAPGGKHAAIGFPVLANPLHARSMILETATGK 395

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE------KFAIGVMKKDGSQERLLVEDS 390
           + +R               P G  IAF   SG+         + ++     +E       
Sbjct: 396 ETRRF--------------PHGTDIAFHPISGQLVTGQAGGRLALLDPTTGKEVWNTSVP 441

Query: 391 NLQAP 395
               P
Sbjct: 442 RHSRP 446


>gi|33146605|dbj|BAC79801.1| putative TATA box binding protein-associated factor [Oryza sativa
           Japonica Group]
          Length = 563

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 29/196 (14%), Positives = 61/196 (31%), Gaps = 35/196 (17%)

Query: 128 FRLWDVKDRKQII---GKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESV 184
           FRLW+ K    ++   G  +      +  + H  +   +                     
Sbjct: 336 FRLWNTKLNANLVCYKGHNYPVWDVQFSPVGHYFASASHDRTA----------------- 378

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
                   +  MD+    +R +      +    ++  N   +A  + D      V L D 
Sbjct: 379 -------RIWSMDKI-QPLRIMAGHLSDVDCV-QWHVNCNYIATGSSDK----TVRLWDV 425

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN 304
           +     +     RSM+L+   S +G+    S  +D  + ++ +         L       
Sbjct: 426 QTGECIRMFIGHRSMVLSLAMSPDGRYMA-SGDEDGTIMMWDIS-SGRCVSPLVGHNSCV 483

Query: 305 ISASYSPDSSQIVFES 320
            S +YS + + +   S
Sbjct: 484 WSLAYSCEGALLASGS 499



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 59/187 (31%), Gaps = 23/187 (12%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVF 318
           +   +FS  G     S   D    I+S+D       R+      ++    +  + + I  
Sbjct: 357 VWDVQFSPVGHYFA-SASHDRTARIWSMDKI--QPLRIMAGHLSDVDCVQWHVNCNYIAT 413

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            S     + + +      +  R+     +       SP G  +A     G      +M  
Sbjct: 414 GSS---DKTVRLWDVQTGECIRMFIGHRSMVLSLAMSPDGRYMASGDEDGT-----IMMW 465

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFS------RKKDGDTGSKLYSIDLNGRNETLIN 432
           D S  R +       +  WS     L +S           D   KL+ +  + +   + +
Sbjct: 466 DISSGRCVSPLVGHNSCVWS-----LAYSCEGALLASGSADCTVKLWDVASSTKTLKMDD 520

Query: 433 TPAYASD 439
           T   +++
Sbjct: 521 TKGGSAN 527


>gi|116198051|ref|XP_001224837.1| hypothetical protein CHGG_07181 [Chaetomium globosum CBS 148.51]
 gi|88178460|gb|EAQ85928.1| hypothetical protein CHGG_07181 [Chaetomium globosum CBS 148.51]
          Length = 718

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 41/115 (35%), Gaps = 20/115 (17%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLT--------NTLFINISASYSPDSSQ 315
           RFS NGKR       D+A++I+         ERLT            I  + ++SPDS  
Sbjct: 443 RFSPNGKRLAACGT-DDAVNIW-------DVERLTFCHQLSEHQKPGI-GNLAWSPDSKL 493

Query: 316 IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           +V            +  +   +  R+  D E      VW+  G       F   +
Sbjct: 494 LVTC---GLDHTAKLWDAESGECLRVIDDFEEPVSSCVWAADGQSFVTGSFDKTR 545



 Score = 43.5 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 32/195 (16%), Positives = 69/195 (35%), Gaps = 16/195 (8%)

Query: 214 LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNF-RSMILAPRFSSNGKRA 272
           +++ RFSPN +++A    DD     V + D        ++    +  I    +S +  + 
Sbjct: 439 IWQVRFSPNGKRLAACGTDD----AVNIWDVERLTFCHQLSEHQKPGIGNLAWSPD-SKL 493

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVM 331
           L++   D    ++  D +S    R+ +     +S+  ++ D    V  S  +    L + 
Sbjct: 494 LVTCGLDHTAKLW--DAESGECLRVIDDFEEPVSSCVWAADGQSFVTGSF-DKTRSLKLW 550

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDS 390
              G      +        D   S     +     +  + A+ V      +    LV +S
Sbjct: 551 NLRGDCIH--TWPNLHRTEDLALSRDQHWLV---ATDNQCALHVYNLVTREHVYDLVLNS 605

Query: 391 NLQAPTWSPSGRSLI 405
              + + S   + L+
Sbjct: 606 RAASLSISRDSKFLL 620


>gi|313233637|emb|CBY09808.1| unnamed protein product [Oikopleura dioica]
          Length = 747

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 92/287 (32%), Gaps = 36/287 (12%)

Query: 136 RKQIIGKKFFSSPASWRKI--AHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            +Q+    +    AS R I  AH   +  Y         F+ R   V  S         +
Sbjct: 383 GRQLPPSAY---EASMRGINPAHQKYNKTYFEF---SNFFSKRCYSVQYSGDGPPTPVPM 436

Query: 194 CVMDRDGANIRYL-----TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
                 G  I +      T +  +++     S N  +  Y     +  ++++ +     +
Sbjct: 437 PQDALTGPGIPHQAQAFNTLNHGEVVCAVTIS-NPTRHVYT--GGKGCVKIWDIGNPNLK 493

Query: 249 APKRIG---NFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
           +P  I    N  + I + +  ++G+  ++     EA  +   DL  +     T     + 
Sbjct: 494 SPISILECLNRDNYIRSCKLLADGRTLIV---GGEASTLSIWDLGGSTPR--TKGELNSQ 548

Query: 306 SAS-----YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL 360
           + +      SPD ++I F    +G   + V   +     R  Q           SP G  
Sbjct: 549 APACYALAISPD-NKICFSCCSDGN--IAVWDLHNQSIIRTFQGHTDGASCIDISPDGTK 605

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
           +             +    G Q R    D N Q  +  + P+G  L 
Sbjct: 606 LWTGGLDNTVRQWDLHNLGGKQVRQ--HDFNSQIFSLGYCPTGDWLA 650


>gi|297474939|ref|XP_002687673.1| PREDICTED: apoptotic peptidase activating factor 1 isoform 2 [Bos
           taurus]
 gi|296487591|gb|DAA29704.1| apoptotic peptidase activating factor 1 isoform 2 [Bos taurus]
          Length = 1249

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 73/221 (33%), Gaps = 25/221 (11%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       ++   FS + Q++A    D      + +           I      +L  
Sbjct: 608 RLVVRPHTDAVYHACFSEDGQRIASCGADK----TLQVFKAETGEKLLEIKAHEDEVLCC 663

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS++ K    +   D+ + I+  +  +    R+ +     ++  +  ++S  +  +   
Sbjct: 664 AFSADDKFIA-TCSVDKKVKIW--NSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGS 720

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L +   N  + +        S     +SP   ++A     G    + +     + E
Sbjct: 721 NDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGT---LKLWDVKSANE 777

Query: 384 R--LLVEDS--NLQAP-----------TWSPSGRSLIFSRK 409
           R  + V+    N + P           +WS  G  ++ + K
Sbjct: 778 RKSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAK 818


>gi|330864777|ref|NP_001178436.1| apoptotic peptidase activating factor 1 [Bos taurus]
 gi|297474937|ref|XP_002687672.1| PREDICTED: apoptotic peptidase activating factor 1 isoform 1 [Bos
           taurus]
 gi|296487590|gb|DAA29703.1| apoptotic peptidase activating factor 1 isoform 1 [Bos taurus]
          Length = 1238

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 31/221 (14%), Positives = 73/221 (33%), Gaps = 25/221 (11%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R +       ++   FS + Q++A    D      + +           I      +L  
Sbjct: 597 RLVVRPHTDAVYHACFSEDGQRIASCGADK----TLQVFKAETGEKLLEIKAHEDEVLCC 652

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
            FS++ K    +   D+ + I+  +  +    R+ +     ++  +  ++S  +  +   
Sbjct: 653 AFSADDKFIA-TCSVDKKVKIW--NSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGS 709

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
               L +   N  + +        S     +SP   ++A     G    + +     + E
Sbjct: 710 NDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGT---LKLWDVKSANE 766

Query: 384 R--LLVEDS--NLQAP-----------TWSPSGRSLIFSRK 409
           R  + V+    N + P           +WS  G  ++ + K
Sbjct: 767 RKSINVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAK 807


>gi|255078014|ref|XP_002502587.1| anaphase promoting complex protein [Micromonas sp. RCC299]
 gi|226517852|gb|ACO63845.1| anaphase promoting complex protein [Micromonas sp. RCC299]
          Length = 454

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 49/170 (28%), Gaps = 16/170 (9%)

Query: 284 IYSVDLQSNATERL--T---NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQ 338
           +Y  +  S   ++L  T   N      S  +  D   I      + + Q++    + S  
Sbjct: 159 VYLWNADSGDIQQLCQTDPNNGDDYVTSVQWGGDGKHIA-VGTNDAEVQIW----DVSRL 213

Query: 339 KRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWS 398
           K++   +  +      +  G  +A            V  ++     L      +    W+
Sbjct: 214 KQVRTLRGHNARVGALAWNGTQLATGSRDNTVMMHDVRIREHRTATLTSHSQEVCGLKWA 273

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRN---ETLINTPAYASDPQWVGF 445
           PSG  L        D    ++  +  G       L    A      W  F
Sbjct: 274 PSGNQLA---SGGNDNLLHIWDQNSIGNGTHLHRLDAHQAAVKALAWCPF 320



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 68/173 (39%), Gaps = 21/173 (12%)

Query: 193 LCVMDRDGANIRYLT----PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
           + + + D  +I+ L      + D  +   ++  + + +A  T D E    V + D    +
Sbjct: 159 VYLWNADSGDIQQLCQTDPNNGDDYVTSVQWGGDGKHIAVGTNDAE----VQIWDVSRLK 214

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
             + +    + + A  +  NG +   +  +D  + ++ V ++ + T  LT+         
Sbjct: 215 QVRTLRGHNARVGALAW--NGTQLA-TGSRDNTVMMHDVRIREHRTATLTSHSQEVCGLK 271

Query: 309 YSPDSSQIVFESDREGKEQ-LYVMQS----NGSDQKRISQDKEASYFDPVWSP 356
           ++P  +Q+       G +  L++       NG+   R+    +A+     W P
Sbjct: 272 WAPSGNQLA----SGGNDNLLHIWDQNSIGNGTHLHRL-DAHQAAVKALAWCP 319


>gi|168698538|ref|ZP_02730815.1| WD-repeat protein [Gemmata obscuriglobus UQM 2246]
          Length = 571

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 35/222 (15%), Positives = 80/222 (36%), Gaps = 24/222 (10%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
             +  DG  +R+    R        F+P+ + VA      +D   ++L+          +
Sbjct: 7   WEIGPDGPQLRWKQKPRGIAYRSLAFAPDGRTVA---CGGDDEHAIHLLAAATGETTGTL 63

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL----TNTLFINISASY 309
            + R   L   +S +G+    S  +    ++   D+ +    R+     +      S ++
Sbjct: 64  -DGRGHKLI--YSHDGRSLA-SWDRARTSEVCVWDVAAAEKRRVFSCGRDRAAWVTSFAF 119

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           S D   +V  + R+   +L+ +    + + R+  D  ++     +   G ++     +G+
Sbjct: 120 SADDRTVV-TAGRDRTIRLWGLA---TGRPRVLTDAASNNPFVAFEADGGVLI---EAGD 172

Query: 370 KFAIGVMKKDGSQERLLVEDSNL------QAPTWSPSGRSLI 405
           +         G+  R  VE  ++       A   S  GR + 
Sbjct: 173 RRVRFWDPATGTAARPTVEAPDMTLNLIFDACRVSADGRRIA 214



 Score = 42.3 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 38/287 (13%), Positives = 84/287 (29%), Gaps = 19/287 (6%)

Query: 130 LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFN--SRILFVSESVVSG 187
           +WD++  + I       +P  +        D     +T   G+F   +++         G
Sbjct: 223 VWDLRTGRAIGP---TGAPPGYVASVAFAPDAQTLGLTASAGEFLFVTQLYDARTGRHRG 279

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRID 247
             + S       G +      ++ +I+     +   ++ A                    
Sbjct: 280 EFQTSREGQGVVGMSAPIAVAAKGEIVAAGARARLAREFAITGLCFSWRPGEQAPAVETV 339

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA 307
            A   +G    ++ +P  S +G+        + A  +  VD  S +T   T  +      
Sbjct: 340 VAGTGVGGSTGLLPSPALSRDGRLLA----TNRAGGVVVVDRTSGSTVA-TIKIGPVTQL 394

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDLIAFT 364
            +SPD   +           + V  +    ++    +   + A       SP G  +A  
Sbjct: 395 VFSPDGGSMACWEPGAESTTVSVWDTRTGTRRGRWTVDAGRHAPVAPLALSPGGTRLAIG 454

Query: 365 ----KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSLI 405
                   +  ++ V      +           A    +S  GR++ 
Sbjct: 455 SPVFSPGNDTGSVRVWSVATGERVWEASLPTNPACAVEFSGDGRAVA 501


>gi|284044024|ref|YP_003394364.1| hypothetical protein Cwoe_2568 [Conexibacter woesei DSM 14684]
 gi|283948245|gb|ADB50989.1| conserved hypothetical protein [Conexibacter woesei DSM 14684]
          Length = 1176

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 52/258 (20%), Positives = 83/258 (32%), Gaps = 24/258 (9%)

Query: 183  SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPN-QQKVAYATYDDEDILRVYL 241
                G       V +     +   +     I   P  SP    + AY         RV +
Sbjct: 852  RFDGGTPSTGYYVYELASQTVTQQSEGTPVIAIAP--SPRIADRAAYV--IARGTARVDV 907

Query: 242  MDTRIDRAPKRIGNFRSMILAPR---FSSNGKRALI---SVQKDEAMDIYSVDLQSNATE 295
            + T    +   I   R     PR    S++ +   +     Q+  A+  Y+VD+      
Sbjct: 908  VSTTEHTSLFSIDVSRQTSGTPRAIAVSADARTLFVLTADAQRRHALLPYAVDVARRTAR 967

Query: 296  R------LTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK-RISQDKEAS 348
                    T        A  SPD +     S  + K  +   Q +GS Q+  +      S
Sbjct: 968  PAGVVELFTTAGSSGAFALASPDGATAWAISSIDRKLWIVTRQRDGSYQRDPVPLALPGS 1027

Query: 349  YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDS----NLQAPTWSPSGRSL 404
                  SP G  +     SG +  I  ++   S  R +   S     L A T SP G  L
Sbjct: 1028 VGSAAASPDGTRVFVLGKSGTRNTITAVETVASTLRTVTLPSVGSIALNALTVSPDGTRL 1087

Query: 405  IFSRKKDGDTGSKLYSID 422
             F+      +G +++  D
Sbjct: 1088 -FATD-GVQSGIRVFDAD 1103



 Score = 37.7 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 53/156 (33%), Gaps = 7/156 (4%)

Query: 220  SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            SP+       +  D  +  V        +           + +   S +G R  +  +  
Sbjct: 988  SPDGATAWAISSIDRKLWIVTRQRDGSYQRDPVPLALPGSVGSAAASPDGTRVFVLGKSG 1047

Query: 280  EAMDIYSVDLQSNATERLT--NTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                I +V+  ++    +T  +   I ++A + SPD +++ F +D   +  + V  ++  
Sbjct: 1048 TRNTITAVETVASTLRTVTLPSVGSIALNALTVSPDGTRL-FATD-GVQSGIRVFDADSL 1105

Query: 337  D-QKRISQDKEASY-FDPVWSPQGDLIAFTKFSGEK 370
               + IS D      +    +P G  +         
Sbjct: 1106 RLVQTISWDGAVVLPYGVAVTPTGTQVLSANVGDGD 1141


>gi|256822895|ref|YP_003146858.1| signal peptide [Kangiella koreensis DSM 16069]
 gi|256796434|gb|ACV27090.1| signal peptide [Kangiella koreensis DSM 16069]
          Length = 295

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 72/196 (36%), Gaps = 24/196 (12%)

Query: 258 SMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI-NISASYSPDSSQI 316
                P FS+NG+    +   DE  DI++ +        +T++  +   S +   D +  
Sbjct: 62  GYDNQPHFSANGELLYFTRMMDEQTDIFAYNFADKKLVNITHSDDVSEYSPTVYDDRTLS 121

Query: 317 VFESDREGKEQLYVMQSNGSDQKR----ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
           V   + EG++ L ++  + + Q+     I      ++ +P  +       F         
Sbjct: 122 VIGVNSEGQQHLRLVNIDDASQQVLNPAIEPVGYHAWLNPELAA-----TFVLGEVMTLQ 176

Query: 373 IGVMKKDGSQERLLVEDSNL----QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           +  +K +G  + L+          +          + F+R  DG     ++ I+ +G  +
Sbjct: 177 LFDLKAEGKADPLVENIGRCLQRLEE-------NKVSFTRVIDGQ--HHIFLINQHGEIQ 227

Query: 429 -TLINTPAYASDPQWV 443
            T I  P    D  W+
Sbjct: 228 ATGIVLPEGVQDYVWL 243



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/134 (9%), Positives = 42/134 (31%), Gaps = 5/134 (3%)

Query: 253 IGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
           + + R+    P    +    +I V    +     + + +         +  +    +S +
Sbjct: 18  VSDLRAEDETPSI-PSTDIVVIPVSSPGSA----MKVDAGNALNALKHVGYDNQPHFSAN 72

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              + F    + +  ++           I+   + S + P       L      S  +  
Sbjct: 73  GELLYFTRMMDEQTDIFAYNFADKKLVNITHSDDVSEYSPTVYDDRTLSVIGVNSEGQQH 132

Query: 373 IGVMKKDGSQERLL 386
           + ++  D + +++L
Sbjct: 133 LRLVNIDDASQQVL 146


>gi|220907001|ref|YP_002482312.1| serine/threonine protein kinase with WD40 repeats [Cyanothece sp.
           PCC 7425]
 gi|219863612|gb|ACL43951.1| serine/threonine protein kinase with WD40 repeats [Cyanothece sp.
           PCC 7425]
          Length = 636

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 29/194 (14%), Positives = 68/194 (35%), Gaps = 22/194 (11%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVY 240
           +    S +  +++ + D     +R +T + +  ++    SP+   +A   YD      V 
Sbjct: 444 TFKERSALGSHTIKLWDPLTQALR-ITLAAETAVYALALSPDGHYLASGGYDG----MVR 498

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           + +       +R+      + A   S +G+        D  + I+ +        ++T  
Sbjct: 499 VWEVETGTLLQRMYWQLGPVQAIAISPDGQFLA-GGGFDGTIKIWRL-----EQRQITTW 552

Query: 301 LFIN------ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRIS-QDKEASYFDPV 353
             +       +S  +SPDS  +       G++Q   + S    +  ++ Q   A     +
Sbjct: 553 KVLAKHQRSVLSLCFSPDSQHLA----SGGEDQTVKLWSLNHCRPVVTLQGHTAPLSALL 608

Query: 354 WSPQGDLIAFTKFS 367
           +S  G  +      
Sbjct: 609 FSADGTTLISGSQD 622



 Score = 39.6 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 47/120 (39%), Gaps = 19/120 (15%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   +      +G  +++ +++ G+  +R+   +         SP G  +A     G 
Sbjct: 482 SPDGHYLA-SGGYDGMVRVWEVET-GTLLQRMYW-QLGPVQAIAISPDGQFLA-----GG 533

Query: 370 KFAIGVMKKDGSQERLLV-------EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            F  G +K    ++R +           ++ +  +SP  + L        D   KL+S++
Sbjct: 534 GFD-GTIKIWRLEQRQITTWKVLAKHQRSVLSLCFSPDSQHLA---SGGEDQTVKLWSLN 589


>gi|168699072|ref|ZP_02731349.1| NB-ARC domain protein [Gemmata obscuriglobus UQM 2246]
          Length = 454

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 35/236 (14%), Positives = 75/236 (31%), Gaps = 26/236 (11%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFS------PNQQKVAYATYDDEDILRVYLMDTRID 247
            ++  D A  R  + S    + +P +S       +  +V              + DT   
Sbjct: 8   ALVTWDAATGRVASRSGPFPIGKPVWSSRWAVSADCGRVFRTDSSHR---FADVSDTGTG 64

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNA----TERLTNTLFI 303
           +       F    +   F   G+R   +        + + D QS          T    +
Sbjct: 65  KIVWAEEGFHLGFVHAEFDQTGRRVFAAHSG----RVIAFDGQSGKTLWTATAGTGRGAV 120

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV---WSPQGDL 360
             + + +PD   +          +   M    +   +     E+  F+ V   ++P G  
Sbjct: 121 GTALAVNPDGRSVALAGGWAATRRAGTMGLFDAATGKPLWAGESDGFEAVALTFAPDGRT 180

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-----TWSPSGRSLIFSRKKD 411
           + +   +GE + +  ++   +    +V   N+  P       SP GR+L  +  + 
Sbjct: 181 L-YAVEAGENYTVARVRAYSTGTGKVVTTFNVPTPLPRVAIVSPDGRTLAVASGRH 235


>gi|145498084|ref|XP_001435030.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402159|emb|CAK67633.1| unnamed protein product [Paramecium tetraurelia]
          Length = 793

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 9/100 (9%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQK--RISQDKEASYFDPVWSPQGDLIAFTK 365
           ++SP    +         ++L V Q NG +    R  Q  +       WSP    IA   
Sbjct: 67  TWSPSGLYLA-----TSNDKLIVWQFNGGNLSIYRTYQGHKLEITALCWSPDDQRIATAS 121

Query: 366 FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
             G  F I  +K+DG Q ++      +    W P  + ++
Sbjct: 122 LDGNIF-IYHIKQDGIQHKIDCGQKTVGI-CWDPFDKYIV 159


>gi|119503011|ref|ZP_01625096.1| dipeptidyl peptidase [marine gamma proteobacterium HTCC2080]
 gi|119461357|gb|EAW42447.1| dipeptidyl peptidase [marine gamma proteobacterium HTCC2080]
          Length = 788

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 55/160 (34%), Gaps = 10/160 (6%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           + PN +++ + +         +L  T+      +       +    +  +G+ A+    +
Sbjct: 392 WIPNSEQIWWLSESSG---YSHLYATQEGGTVVQYSQGEFEVTDVAWLPDGESAVALSNR 448

Query: 279 --DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQ-IVFESDREGKEQLYVMQSNG 335
                 D+Y +++ +     LT    +  S +  P+ +Q +   S      Q  V+    
Sbjct: 449 AHPTEYDLYRLNVDAKKWVPLTELKGVE-SFTLHPNGTQALALFSQTYRPTQAVVVDLVN 507

Query: 336 SDQKRISQDKEASYFDPVW-SPQGDLIAFTKFSGEKFAIG 374
            +    +     +Y    W SP  + +A     G +  I 
Sbjct: 508 GNLGARTDTVNDAYSAIRWQSP--EFVAIPSRHGVENPIW 545



 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 8/130 (6%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           N  F ++   + P+S QI + S+  G   LY  Q  G+  +      E    D  W P G
Sbjct: 384 NWQFNDVG--WIPNSEQIWWLSESSGYSHLYATQEGGTVVQ--YSQGEFEVTDVAWLPDG 439

Query: 359 DL-IAFTKF-SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRS--LIFSRKKDGDT 414
           +  +A +      ++ +  +  D  +   L E   +++ T  P+G     +FS+      
Sbjct: 440 ESAVALSNRAHPTEYDLYRLNVDAKKWVPLTELKGVESFTLHPNGTQALALFSQTYRPTQ 499

Query: 415 GSKLYSIDLN 424
              +  ++ N
Sbjct: 500 AVVVDLVNGN 509



 Score = 40.0 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 13/87 (14%), Positives = 31/87 (35%)

Query: 346 EASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              + D  W P  + I +   S     +   ++ G+  +    +  +    W P G S +
Sbjct: 384 NWQFNDVGWIPNSEQIWWLSESSGYSHLYATQEGGTVVQYSQGEFEVTDVAWLPDGESAV 443

Query: 406 FSRKKDGDTGSKLYSIDLNGRNETLIN 432
               +   T   LY ++++ +    + 
Sbjct: 444 ALSNRAHPTEYDLYRLNVDAKKWVPLT 470


>gi|32475980|ref|NP_868974.1| vegetatible incompatibility protein HET-E1 [Rhodopirellula baltica
           SH 1]
 gi|32446523|emb|CAD76359.1| vegetatible incompatibility protein HET-E1 [Rhodopirellula baltica
           SH 1]
          Length = 935

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 33/231 (14%), Positives = 75/231 (32%), Gaps = 29/231 (12%)

Query: 158 ISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEP 217
            +D +        G    ++L       S   +  L  +  DG+ IR +       +F  
Sbjct: 719 FADRVLSIDVHPSG----KLLATGGGEPSRTGEWMLWKV-SDGSLIRKIPNPHGDTVFCV 773

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           RFSP+ Q +A    D      + L D    +  K +      + +  +++N +    +  
Sbjct: 774 RFSPDGQTLATGGADQ----MIKLWDVESGKLIKTLEGHTHHVTSIAWNANLRELA-TGS 828

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDR------EGKEQLYVM 331
            D  + ++  ++++    R        +        +++VF           G     V 
Sbjct: 829 ADATVKVW--NIETGQATRTITGFKTEV--------TKLVFVGRENRLGVTSGDSVFRVY 878

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQ 382
           +++   ++  ++      +       G        SG      ++ K G Q
Sbjct: 879 RTDNGARETNTKVAGDYLYALDSDRDGSQFIVGGASGTA---TLIDKSGKQ 926


>gi|7176|emb|CAA34531.1| unnamed protein product [Dictyostelium discoideum]
          Length = 437

 Score = 44.2 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 25/207 (12%), Positives = 69/207 (33%), Gaps = 15/207 (7%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
               D  + +  +SP    +  +   D+    + + D +I +    +    S  +  R+S
Sbjct: 183 LKGHDGSIEKISWSPKNNDLLASAGTDK---VIKIWDVKIGKCIGTVST-NSENIDVRWS 238

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS-YSPDSSQIVFESDREGK 325
            +G+  +   + D    +  +DL +  T ++       ++   +  +   I+  +     
Sbjct: 239 PDGQFIVACTRDD---HLALIDLPTIKTLKIYKFNGEELNQVGWDNNGDLILMANSMGNI 295

Query: 326 EQLYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           E    +  + +  K +       AS +   + P G  +A          + +   +    
Sbjct: 296 EAYKFLPKSTTHVKHLKTLYGHTASIYCMEFDPTGKYLAAGSADS---IVSLWDIEDMMC 352

Query: 384 RLLV--EDSNLQAPTWSPSGRSLIFSR 408
                      ++ ++S  G+ +  S 
Sbjct: 353 VKTFIKSTFPCRSVSFSFDGQFIAASS 379


>gi|330945928|ref|XP_003306655.1| hypothetical protein PTT_19844 [Pyrenophora teres f. teres 0-1]
 gi|311315756|gb|EFQ85250.1| hypothetical protein PTT_19844 [Pyrenophora teres f. teres 0-1]
          Length = 885

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 68/178 (38%), Gaps = 24/178 (13%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
             SS+G    +     + + +  V+ +  +   L +        S+    +++   S  +
Sbjct: 103 ALSSDGNWIAV---GSDELSVNLVNTKDKSMRTLRDQPRAVKHVSFDKTDNRLA-VSCTD 158

Query: 324 GKEQLYVMQSNGSD-QKRI-----SQDKEASYFDPV-WSPQGDLIAFTKFSGEKFAIGVM 376
           G   +Y +  +  +  KR+     S + +A     V W P G   AF   +  +  + VM
Sbjct: 159 GHVYMYTLDGDQPEMVKRVEGMIKSMEADAESSSKVLWHPDGR--AFATPTAMR-QMQVM 215

Query: 377 KKDGSQERLLVEDS---NLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
                + + + +     ++ A  WSP+G  L+ +     D    L+    + + + ++
Sbjct: 216 STSDWERQRVFKTGHTADITAAAWSPNGALLVTTSS---DLNLNLW----DTKTQKVL 266



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/109 (15%), Positives = 41/109 (37%), Gaps = 8/109 (7%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERL--TNTLFINISASYSPDSSQIVFESDR 322
           +  +G+    +        +  +       +R+  T       +A++SP+ + +V  S  
Sbjct: 196 WHPDGR--AFAT-PTAMRQMQVMSTSDWERQRVFKTGHTADITAAAWSPNGALLVTTSS- 251

Query: 323 EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
                L +  +      +  +D +A+     W P  + +++T   GE F
Sbjct: 252 --DLNLNLWDTKTQKVLKKYEDVKATILAMAWHPTENTLSYTNNEGELF 298


>gi|242809449|ref|XP_002485371.1| transcription initiation factor tfiid, putative [Talaromyces
           stipitatus ATCC 10500]
 gi|218715996|gb|EED15418.1| transcription initiation factor tfiid, putative [Talaromyces
           stipitatus ATCC 10500]
          Length = 780

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 15/116 (12%), Positives = 42/116 (36%), Gaps = 13/116 (11%)

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           FS +G+    +  +D+ + ++  ++Q+    +      +     +S +     F  D   
Sbjct: 279 FSPDGQLLA-TESQDKEISLW--NVQTGNLVKTFKGYGL----VFSANGQLAAFAED--- 328

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            + + +  +      +  +  +      ++SP G  +A     G    + + K D 
Sbjct: 329 DKVVEIWNTMTGALVKAFKGHQDYVSKVIFSPDGQFLASASRDGT---VRLWKADT 381



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 47/136 (34%), Gaps = 16/136 (11%)

Query: 159 SDDIYQSIT-GEKGDFNSRILFVSESV-----VSGIIKNSLCVMDRDGANIRYLTPSRDQ 212
           +DD   SIT   +    SR+  V  S       +      + + +    N+         
Sbjct: 255 ADDDLDSITVPPEEVIQSRVHKVLFSPDGQLLATESQDKEISLWNVQTGNLVKTFKGYGL 314

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRA 272
           +     FS N Q  A+A    ED   V + +T      K     +  +    FS +G+  
Sbjct: 315 V-----FSANGQLAAFA----EDDKVVEIWNTMTGALVKAFKGHQDYVSKVIFSPDGQFL 365

Query: 273 LISVQKDEAMDIYSVD 288
             S  +D  + ++  D
Sbjct: 366 A-SASRDGTVRLWKAD 380


>gi|194390528|dbj|BAG62023.1| unnamed protein product [Homo sapiens]
          Length = 247

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 35/80 (43%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIV 317
                   S ++SPDSS + 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC 230



 Score = 38.8 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 1/81 (1%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 149 NGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 208

Query: 385 LLVEDSNL-QAPTWSPSGRSL 404
           +L    N   +  +SP    L
Sbjct: 209 VLRGHQNWVYSCAFSPDSSML 229


>gi|195118272|ref|XP_002003664.1| GI21646 [Drosophila mojavensis]
 gi|193914239|gb|EDW13106.1| GI21646 [Drosophila mojavensis]
          Length = 723

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 60/185 (32%), Gaps = 18/185 (9%)

Query: 200 GAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRS 258
           G N            +   ++ P  Q +A  + D      + +     DR    +     
Sbjct: 545 GMNEPIKTFRGHTNEVNAIKWCPQGQLLASCSDDM----TLKIWSMTRDRCCHDLQAHSK 600

Query: 259 MILAPRFSSNG--------KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
            I   ++S  G           L S   D  + ++ V+ + +    LT       S ++S
Sbjct: 601 EIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVE-RGSCIHTLTKHTEPVYSVAFS 659

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           PD   +   S     ++   + S  + Q   S       F+  W+ +G  +  +   G  
Sbjct: 660 PDGKHLASGSF----DKCVHIWSTQTGQLVHSYKGTGGIFEVCWNSKGTKVGASASDGSV 715

Query: 371 FAIGV 375
           F + +
Sbjct: 716 FVLDL 720


>gi|195134797|ref|XP_002011823.1| GI14411 [Drosophila mojavensis]
 gi|193909077|gb|EDW07944.1| GI14411 [Drosophila mojavensis]
          Length = 356

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 27/224 (12%), Positives = 70/224 (31%), Gaps = 11/224 (4%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
            R +       +    +SP+++ +  ++ D     R+ + D         +    + I+A
Sbjct: 60  PRKVLKGHQAKVLCTDWSPDKRHIISSSQDG----RLIIWDAFTTNKEHAVTMPTTWIMA 115

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI-SASYSPDSSQIVFESD 321
             ++ +G         ++         +  A ++ T     +  S    P+S Q +    
Sbjct: 116 CAYAPSGNYVACGGLDNKVTVYPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTG- 174

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA-IGVMKKDG 380
             G     +         +              +P      F   S ++ A I  M+   
Sbjct: 175 -SGDSTCALWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGH 233

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLN 424
             +      S++ +  + P G ++        D+  +L+ +  +
Sbjct: 234 VVQSFEGHQSDVNSVKFHPCGDAIATGSD---DSSCRLFDMRAD 274


>gi|15921013|ref|NP_376682.1| acylamino acid-releasing enzyme [Sulfolobus tokodaii str. 7]
 gi|15621797|dbj|BAB65791.1| 583aa long hypothetical acylamino-acid-releasing enzyme [Sulfolobus
           tokodaii str. 7]
          Length = 583

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 26/160 (16%)

Query: 268 NGKRALISVQKD----EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE 323
           NG R +IS  ++       DIY VD+ +    R+T       + + + D  +I +   R+
Sbjct: 159 NGNRVIISATRENDDYGLADIYEVDINTGELTRITQGEGNITAIAMNKDG-KIAYLGHRK 217

Query: 324 GKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-----------QGDLIAFTKFSGEKFA 372
           GK   + ++     ++  S     +  + V S            +GD +      G +  
Sbjct: 218 GKS-PWAVREIIFPEEGKSFLCGNTCGNTVLSDLFDGVKEKIVYEGDQVITLGQVGGESH 276

Query: 373 IGVMK---KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK 409
           I  +       ++ +L V   + +       G+   F   
Sbjct: 277 IYSVSDKVTKLTEGKLAVRGFDFK------DGKLAYFYST 310


>gi|332829559|gb|EGK02205.1| hypothetical protein HMPREF9455_01475 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 739

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 34/223 (15%), Positives = 74/223 (33%), Gaps = 23/223 (10%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ ++ AY +  +  +  +   + +       +  + S  +   +S + K+ +    + 
Sbjct: 162 SPDGKQEAYISEGNLWVTDLATKENKKISIDGSVSEYYSSNIY--WSPDSKKIVCCKYRP 219

Query: 280 EAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
                  + + S+  ++L   T            P    + F  D     +  V      
Sbjct: 220 AETRKLLL-IASSPKDQLQPKTEEYDYPKPGDALPIRRPVAFLVDEGKTIEFKVPDVEAQ 278

Query: 337 -DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED------ 389
                I  DKE+ YF            F K   +++ I        + R +V++      
Sbjct: 279 FSLDDIKWDKESRYFTFS---------FNKRGHQQYVIYAGDISTGKLRPVVDEKSQTFV 329

Query: 390 -SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLI 431
             N     W  +G+ L++  ++DG     LY +      + L 
Sbjct: 330 YYNALYQHWFENGKELLWISERDGWRHIYLYDVFTGMVKKQLT 372



 Score = 39.6 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 34/291 (11%), Positives = 82/291 (28%), Gaps = 53/291 (18%)

Query: 163 YQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPR---F 219
           Y      K D   ++        + I + +L V D      + ++       +      +
Sbjct: 146 YYWGGIFKEDRKDKVKSPDGKQEAYISEGNLWVTDLATKENKKISIDGSVSEYYSSNIYW 205

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN------------------------ 255
           SP+ +K+    Y   +  ++ L+ +      +                            
Sbjct: 206 SPDSKKIVCCKYRPAETRKLLLIASSPKDQLQPKTEEYDYPKPGDALPIRRPVAFLVDEG 265

Query: 256 ----FRSMILAPRFSSN-------GKRALISVQKDEAMD--IYSVDLQSNATERL----- 297
               F+   +  +FS +        +    S  K       IY+ D+ +     +     
Sbjct: 266 KTIEFKVPDVEAQFSLDDIKWDKESRYFTFSFNKRGHQQYVIYAGDISTGKLRPVVDEKS 325

Query: 298 -TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP 356
            T   +  +   +  +  ++++ S+R+G   +Y+        K+     E      V   
Sbjct: 326 QTFVYYNALYQHWFENGKELLWISERDGWRHIYLYDVFTGMVKKQLTKGEWVVKSVVNVD 385

Query: 357 QGDLIAFTKFSGEKF-------AIGVMKKDGSQERLLVEDSNLQAPTWSPS 400
           +       K  G              +  D  + + L  ++     T+S  
Sbjct: 386 EKKRTLIFKACGMDKGEDPYLEKYYSLNIDNGKIQPLTPENANHNVTFSSD 436


>gi|330467539|ref|YP_004405282.1| hypothetical protein VAB18032_17900 [Verrucosispora maris
           AB-18-032]
 gi|328810510|gb|AEB44682.1| hypothetical protein VAB18032_17900 [Verrucosispora maris
           AB-18-032]
          Length = 1118

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 36/263 (13%), Positives = 85/263 (32%), Gaps = 34/263 (12%)

Query: 189 IKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDR 248
               L V       IR+        +     S + + +       +D  +V + DT    
Sbjct: 446 RDRQLRVWSLQTGRIRHELTGHTGAVTSVSLSADGRVLV----SADDTGQVRVWDTTSGG 501

Query: 249 APKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---- 304
             +R+    ++  +   S +G   +++V +D  + +    +      R T     +    
Sbjct: 502 CTRRVDVPPTVAGSVAVSPDGT-VVVAVGQDRVVRLLGDPIH--VVGRATVAPADSSMSR 558

Query: 305 --ISASYSPDSSQ-IVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              + + +PD+ + +VF+   E    L V+  +  +   +        +    S      
Sbjct: 559 HGTTVAVTPDNHRVVVFD---EWSWHLQVLDVDTGE---LLWSVGGLRWHGTVSANARF- 611

Query: 362 AFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTW---SPSGRSLIFSRKKDGDTGSK 417
           A +     +    ++     Q   L   +      +W   S  GR    +     +   +
Sbjct: 612 ALSATDDGRM--WLLDLTAFQITDLGSAALWNNGFSWLAVSDDGR----TAVNAFERVVQ 665

Query: 418 LYSIDLNGRNETLINTPAYASDP 440
           ++ +D   +   +  TP  + DP
Sbjct: 666 VWRLD---QVRCVFTTPIESRDP 685


>gi|322705065|gb|EFY96654.1| WD repeat-containing protein [Metarhizium anisopliae ARSEF 23]
          Length = 515

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 58/172 (33%), Gaps = 12/172 (6%)

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFIN 304
           + R   RI      ILA +FS      L +   D+   I+  D ++   + +L       
Sbjct: 135 VTRMSHRIPGHGEAILAAQFSPETNTRLATGSGDKTARIW--DTETGTPKYKLAGHTHWV 192

Query: 305 ISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSP-----QGD 359
           +  ++SPD  ++      +   +L+   + G       +       +  W P      G 
Sbjct: 193 LCVAWSPDGKRLA-TGSMDKSVRLWD-PATGKAVGSPLRGHSKWITNIAWEPYHLWRDGT 250

Query: 360 LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
               +        I V+    ++  L    S++    W   G  LI++   D
Sbjct: 251 PRLASASKDMTVRIWVVNTGTTEHVLSGHKSSVSCIRWG--GTGLIYTGSHD 300



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 39/117 (33%), Gaps = 10/117 (8%)

Query: 183 SVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM 242
            + +G    +  + D +    +Y        +    +SP+ +++A  + D      V L 
Sbjct: 161 RLATGSGDKTARIWDTETGTPKYKLAGHTHWVLCVAWSPDGKRLATGSMDK----SVRLW 216

Query: 243 DTRIDR-APKRIGNFRSMILAPRFSS-----NGKRALISVQKDEAMDIYSVDLQSNA 293
           D    +     +      I    +       +G   L S  KD  + I+ V+  +  
Sbjct: 217 DPATGKAVGSPLRGHSKWITNIAWEPYHLWRDGTPRLASASKDMTVRIWVVNTGTTE 273



 Score = 40.0 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 17/159 (10%)

Query: 180 VSESVVSGIIKNSLCVMDRDGAN-IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           VSE +VS     ++ + +    N          + +    FSP+   +A   +D+     
Sbjct: 370 VSERLVSASDDFTMFLWEPSQGNKPVARMVGHQKQINHVTFSPDNTLIASTGWDN----- 424

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNATE 295
                    R  K I   R  +       FS++  R L++  KD  + ++S+        
Sbjct: 425 --HTKIWSARDGKFIDTLRGHVATVYQCSFSAD-SRLLVTASKDTTLKVWSM-ASFKLVV 480

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
            L        +  ++PD  ++       GK++   + +N
Sbjct: 481 DLPGHHDEVYAVDWAPDGKRVA----SGGKDKAVRLWAN 515


>gi|298711100|emb|CBJ32329.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 369

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 28/193 (14%), Positives = 63/193 (32%), Gaps = 22/193 (11%)

Query: 248 RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER---LTNTLFIN 304
           R    +      +    +S +G+    S   D+ + ++     S    R   L       
Sbjct: 5   RETAALEGHTERVWCVAWSPDGRLLA-SCSSDKTIRVWCQSKDSENGWRCAALLEDGATR 63

Query: 305 IS--ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQ-------DKEASYFDPVWS 355
                 +SP    I   S  +G   ++  Q + +    ++          E       WS
Sbjct: 64  TVRCCDWSPCGRFIAAVSF-DGTCSVWRRQESTTTAGELAWELTATLEGHENEVKSVAWS 122

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV----EDSNLQAPTWSPSGRSLIFSRKKD 411
             G+L+A        + I    +       +       +++++  W P+ + ++ S    
Sbjct: 123 RGGNLLATCGRDKSVW-IWEYDESEGDYECVTVLSDHTADVKSVRWLPN-KDVLVSCSY- 179

Query: 412 GDTGSKLYSIDLN 424
            D   +L++ DL+
Sbjct: 180 -DETVRLWAEDLD 191



 Score = 43.1 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 36/256 (14%), Positives = 76/256 (29%), Gaps = 45/256 (17%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR-SMILAPR- 264
                + ++   +SP+ + +A  + D    +RV+      +   +             R 
Sbjct: 10  LEGHTERVWCVAWSPDGRLLASCSSD--KTIRVWCQSKDSENGWRCAALLEDGATRTVRC 67

Query: 265 --FSSNGKRALISVQKDEAMDIY----SVDLQSNATERLTN----TLFINISASYSPDSS 314
             +S  G+    +V  D    ++    S          LT           S ++S   +
Sbjct: 68  CDWSPCGRFIA-AVSFDGTCSVWRRQESTTTAGELAWELTATLEGHENEVKSVAWSRGGN 126

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRIS--QDKEASYFDPVWSPQGDLIAFTKF------ 366
            +     R+    ++    +  D + ++   D  A      W P  D++    +      
Sbjct: 127 LLATC-GRDKSVWIWEYDESEGDYECVTVLSDHTADVKSVRWLPNKDVLVSCSYDETVRL 185

Query: 367 --------------SGEKFAIGVMKKDGSQERLLVEDSNLQAPTW--SPS----GRSLIF 406
                         +     +  +  DG  ERL     + +   W   P     G+    
Sbjct: 186 WAEDLDDWYLLDTLNDHTATVWGIAADGPGERLATVGGDEKLVLWRNFPDETKHGKWRA- 244

Query: 407 SRKKDGDTGSKLYSID 422
                G+ G  +YS+D
Sbjct: 245 ESTLSGEHGGTIYSVD 260



 Score = 40.0 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 47/153 (30%), Gaps = 20/153 (13%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSD----QKRISQDKEASYFDPVWSPQGDLIAF 363
           ++SPD   +   S  +   +++    +  +       +      +     WSP G  IA 
Sbjct: 21  AWSPDGRLLASCSS-DKTIRVWCQSKDSENGWRCAALLEDGATRTVRCCDWSPCGRFIAA 79

Query: 364 TKFSGEKFAIGVMKKDGSQERL---LVED-----SNLQAPTWSPSGRSLIFSRKKDGDTG 415
             F G        +   +   L   L        + +++  WS  G  L        D  
Sbjct: 80  VSFDGTCSVWRRQESTTTAGELAWELTATLEGHENEVKSVAWSRGGNLLA---TCGRDKS 136

Query: 416 SKLYSID-LNGRNE---TLINTPAYASDPQWVG 444
             ++  D   G  E    L +  A     +W+ 
Sbjct: 137 VWIWEYDESEGDYECVTVLSDHTADVKSVRWLP 169


>gi|170749598|ref|YP_001755858.1| cytochrome c class I [Methylobacterium radiotolerans JCM 2831]
 gi|170656120|gb|ACB25175.1| cytochrome c class I [Methylobacterium radiotolerans JCM 2831]
          Length = 428

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 37/241 (15%), Positives = 74/241 (30%), Gaps = 28/241 (11%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYAT 230
           G  N+          +      + +     A    +       +     SP+   +A A+
Sbjct: 72  GAVNAVAALPDGRFATASEDGRIALWRLGRAEPERVLEGHTGPIVALAVSPDGLSLASAS 131

Query: 231 YDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
           +D     R++ +        + +   R  + A  F   G  A ++   D A+ I++   +
Sbjct: 132 WD--GTARIWPL---AGGDSRLLDPHRGPVNAVAFLPGG--APVTAGADGAVRIWA--AE 182

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDRE----GKEQLYVMQSNGSDQKRISQDKE 346
             +    T    +N           +   SD E    G + +          +  ++   
Sbjct: 183 GTSQVIATAPTGLNA----------VAVASDSEIAAAGADAILRFVRADGSVRAAAELGP 232

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL-LVEDSN-LQAPTWSPSGRSL 404
                   SP G  +A     G      V+ +   Q +L LV     + +  W P G  L
Sbjct: 233 NPVIALALSPDGTRVAAATAGGTI---AVVDRATGQVQLRLVGPGLPVWSLAWRPDGAEL 289

Query: 405 I 405
           +
Sbjct: 290 L 290


>gi|50290845|ref|XP_447855.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527166|emb|CAG60804.1| unnamed protein product [Candida glabrata]
          Length = 517

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 53/138 (38%), Gaps = 18/138 (13%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G           +++    FSP+ + +  A++D+        +     +    +  FR  
Sbjct: 393 GTKPISRMTGHQKLVNHVAFSPDGKYIVSASFDNS-------IKLWDGKEGTFLSTFRGH 445

Query: 260 ILA---PRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQ 315
           + +     +SS+  R L+S  KD  + ++  D+++      L        +  +S D  +
Sbjct: 446 VASVYQVAWSSD-CRLLVSCSKDTTLKVW--DVKTRKLSVDLPGHQDEVYTVDWSVDGKR 502

Query: 316 IVFESDREGKEQLYVMQS 333
           +       GK+++  + +
Sbjct: 503 VC----SGGKDKMMRLWT 516



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 37/124 (29%), Gaps = 11/124 (8%)

Query: 241 LMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
               +  +   R+   + ++    FS +GK  + S   D ++ ++           L+  
Sbjct: 388 WNPLKGTKPISRMTGHQKLVNHVAFSPDGKYIV-SASFDNSIKLW----DGKEGTFLSTF 442

Query: 301 LFINIS---ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                S    ++S D   +V  S       L V               +   +   WS  
Sbjct: 443 RGHVASVYQVAWSSDCRLLVSCSK---DTTLKVWDVKTRKLSVDLPGHQDEVYTVDWSVD 499

Query: 358 GDLI 361
           G  +
Sbjct: 500 GKRV 503



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 47/334 (14%), Positives = 100/334 (29%), Gaps = 56/334 (16%)

Query: 102 DWNSLGAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDD 161
            W++ G +V+ TG +            RLWD +  K +          + R  +  I+  
Sbjct: 195 SWSADG-EVIATGSMDNT--------IRLWDAESGKPLG--------DALRGHSKWITSL 237

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIK--NSLCVMDRDGANIRY--LTPSRDQILFEP 217
            ++ I   +     R+   S+     I      +C+M   G       +    + IL+  
Sbjct: 238 TWEPIHLVEPGSKPRLASASKDGTIRIWDSSRRVCLMTLGGHTNSVSCVKWGGEGILY-- 295

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF------------ 265
             S ++   A+    +   + +               ++   + A  +            
Sbjct: 296 SGSHDKTVRAWDMKQNGKCINILKSHAHWVNHLSLSTDYALRVGAFDYTGVKPANAKEAR 355

Query: 266 -----------SSNGKR--ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPD 312
                        NGK    +++   D  M +++    +    R+T    +    ++SPD
Sbjct: 356 DKALQNYEKVARKNGKHEELMVTASDDFTMFLWNPLKGTKPISRMTGHQKLVNHVAFSPD 415

Query: 313 SSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA 372
              IV  S       + +            +   AS +   WS    L+           
Sbjct: 416 GKYIVSASF---DNSIKLWDGKEGTFLSTFRGHVASVYQVAWSSDCRLLVSCSKDTT--- 469

Query: 373 IGVMKKDGSQERLLVEDSNLQAPT--WSPSGRSL 404
           + V      +  + +     +  T  WS  G+ +
Sbjct: 470 LKVWDVKTRKLSVDLPGHQDEVYTVDWSVDGKRV 503


>gi|74025270|ref|XP_829201.1| guanine nucleotide-binding protein subunit beta - like protein
           [Trypanosoma brucei TREU927]
 gi|74025272|ref|XP_829202.1| guanine nucleotide-binding protein subunit beta-like protein
           [Trypanosoma brucei TREU927]
 gi|59799530|sp|P69104|GBLP_TRYBR RecName: Full=Guanine nucleotide-binding protein subunit beta-like
           protein; AltName: Full=Activated protein kinase C
           receptor homolog; AltName: Full=Track
 gi|78100138|sp|P69103|GBLP_TRYBB RecName: Full=Guanine nucleotide-binding protein subunit beta-like
           protein; AltName: Full=Activated protein kinase C
           receptor homolog
 gi|2952301|gb|AAC05497.1| activated protein kinase C receptor homolog TRACK [Trypanosoma
           brucei rhodesiense]
 gi|3776549|gb|AAC64858.1| activated protein kinase C receptor homolog [Trypanosoma brucei]
 gi|70834587|gb|EAN80089.1| guanine nucleotide-binding protein beta subunit- like protein
           [Trypanosoma brucei]
 gi|70834588|gb|EAN80090.1| guanine nucleotide-binding protein beta subunit-like protein
           [Trypanosoma brucei]
 gi|261335156|emb|CBH18150.1| activated protein kinase c receptor [Trypanosoma brucei gambiense
           DAL972]
          Length = 318

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 28/218 (12%), Positives = 67/218 (30%), Gaps = 13/218 (5%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
                      + +   S N      A++D      + L + +  +   +       +L+
Sbjct: 59  PDRRLEGHSAFVSDVALSNNGNFAVSASWDH----SLRLWNLQNGQCQYKFLGHTKDVLS 114

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA--SYSPDSSQIVFES 320
             FS + ++ + S  +D A+ ++  +++      L+     +  +   +SP     V  S
Sbjct: 115 VAFSPDNRQIV-SGGRDNALRVW--NVKGECMHTLSRGAHTDWVSCVRFSPSLDAPVIVS 171

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                  + V            +           SP G L A +        +  +   G
Sbjct: 172 G-GWDNLVKVWDLATGRLVTDLKGHTNYVTSVTVSPDGSLCA-SSDKDGVARLWDL-TKG 228

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
                +   + +    +SP+ R  + +  + G     L
Sbjct: 229 EALSEMAAGAPINQICFSPN-RYWMCAATEKGIRIFDL 265



 Score = 43.1 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 41/232 (17%), Positives = 79/232 (34%), Gaps = 24/232 (10%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           VS    +SL + +      +Y      + +    FSP+ +++   +   ++ LRV+ +  
Sbjct: 83  VSASWDHSLRLWNLQNGQCQYKFLGHTKDVLSVAFSPDNRQI--VSGGRDNALRVWNVKG 140

Query: 245 RIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSV-DLQSNAT-ERLTNTLF 302
                  R G     +   RFS +    +I        ++  V DL +      L     
Sbjct: 141 ECMHTLSR-GAHTDWVSCVRFSPSLDAPVIVS--GGWDNLVKVWDLATGRLVTDLKGHTN 197

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S + SPD S     SD++G  +L+ + + G     ++     +     +SP    + 
Sbjct: 198 YVTSVTVSPDGSLCA-SSDKDGVARLWDL-TKGEALSEMAAGAPINQIC--FSPNRYWMC 253

Query: 363 FTKFSGEKFAIGVMKKDGSQERL----LVEDSNLQAP-----TWSPSGRSLI 405
                G    I +   +     +      + S    P      WS  G +L 
Sbjct: 254 AATEKG----IRIFDLENKDIIVELAPEHQGSKKIVPECVSIAWSADGSTLY 301


>gi|328787049|ref|XP_001120374.2| PREDICTED: transcription initiation factor TFIID subunit 5 [Apis
           mellifera]
          Length = 642

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 22/179 (12%)

Query: 235 DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           D + V +MD R     + +      I    FS + +  L+S  +D  + ++S+       
Sbjct: 374 DDVLVRMMDDRTAETSRSLFGHNGPIYNLSFSPD-RNLLLSSSEDSTVRLWSLHT----- 427

Query: 295 ERLTN------TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEAS 348
              T        LF      +SP        S  +   +L+   ++     RI     + 
Sbjct: 428 --WTCVVCYKGHLFPVWCVRFSPHGYYFA-TSSHDKTARLWA--TDSHQPLRIFAGHYSD 482

Query: 349 YFDPVWSPQGDLIAFTKFSGEKFAIGVMK-KDGSQERLLV-EDSNLQAPTWSPSGRSLI 405
                + P  + +A          + +     GSQ RL+    + + +  +S  GR L 
Sbjct: 483 VDVVQFHPNSNYVA---TGSSDMTVRLWDCVTGSQVRLMTGHKAPIYSLAFSAEGRFLA 538


>gi|253681440|ref|ZP_04862237.1| putative lipoprotein [Clostridium botulinum D str. 1873]
 gi|253561152|gb|EES90604.1| putative lipoprotein [Clostridium botulinum D str. 1873]
          Length = 1422

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 66/182 (36%), Gaps = 22/182 (12%)

Query: 269 GKRALISVQKDEAMDIYSVDLQS--NATERLTNTLFINISASYSPDSSQIVFESDREGKE 326
           G     +   D   ++Y +D     N      N  +IN+   +       VF S+   K 
Sbjct: 349 GGYIFYNNTGDRN-NLYKLDGNGVVNNAIAYDNAQYINVIDDW-------VFYSNYSDKG 400

Query: 327 QLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           +LY ++ +G++++++             +  G+ I +   S     I  ++ DGS    +
Sbjct: 401 KLYRIKEDGTEKRKL-----CDDMASYITVLGNWIYYCNHSDGG-KIYKIRVDGSGRSKI 454

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP-AYASD--PQWV 443
               N +    +  G  + F+   D       Y I+ +G     ++   A A      WV
Sbjct: 455 TPTFNHETAYLNVVGDWIYFTDITDKHRP---YIINTDGTYSAKLSDEWADAIQVVGDWV 511

Query: 444 GF 445
            +
Sbjct: 512 YY 513


>gi|227884370|ref|ZP_04002175.1| S54 (rhomboid) family peptidase [Escherichia coli 83972]
 gi|300989984|ref|ZP_07179060.1| peptidase, S54 family protein [Escherichia coli MS 45-1]
 gi|301049847|ref|ZP_07196786.1| peptidase, S54 family protein [Escherichia coli MS 185-1]
 gi|227838456|gb|EEJ48922.1| S54 (rhomboid) family peptidase [Escherichia coli 83972]
 gi|300298399|gb|EFJ54784.1| peptidase, S54 family protein [Escherichia coli MS 185-1]
 gi|300407259|gb|EFJ90797.1| peptidase, S54 family protein [Escherichia coli MS 45-1]
 gi|307552520|gb|ADN45295.1| intramembrane serine protease rhomboid family [Escherichia coli ABU
           83972]
 gi|315292079|gb|EFU51431.1| peptidase, S54 family protein [Escherichia coli MS 153-1]
          Length = 625

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 69/221 (31%), Gaps = 13/221 (5%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLM-DTRIDRAPKRIGNF 256
             G  I+ +T       F    S +  K          +  + L+    +   P    + 
Sbjct: 382 ATGEIIQSITTGAHPDSFI--LSRDGTKAWVMNRTSNSVSAIDLVAYQHVADIPLEKYDG 439

Query: 257 RSMILAP-----RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSP 311
             M   P       S + K  L+       +   +            N   +  +  + P
Sbjct: 440 TGMSGKPGAWVMALSPDEKTLLVPGAGRGNIVRINTITHQKEDFPAGNARGVVSAMGFRP 499

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
            + +I+F  D +G  ++       S   +      + Y     SP G  +A   +  + +
Sbjct: 500 KNGEIIFA-DSQGISRIRAEDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSYGLQGY 556

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
            I ++  +  Q   +   S +    +S  GR + F   K+G
Sbjct: 557 VI-LLNINAGQIIGVYPASYVNNLRFSADGRKI-FVMAKNG 595


>gi|158288038|ref|XP_309924.4| AGAP011584-PA [Anopheles gambiae str. PEST]
 gi|157019281|gb|EAA05700.5| AGAP011584-PA [Anopheles gambiae str. PEST]
          Length = 801

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 35/220 (15%), Positives = 73/220 (33%), Gaps = 50/220 (22%)

Query: 218 RFSPNQQKVA---YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
            ++ N + +    + T    D               +++  F+        S +GK  L+
Sbjct: 88  TWTANGKIIFRDDFGTVMVYDPEDNDTKTLLGVANEEQLQGFK-----FDLSPDGKYLLV 142

Query: 275 S-----VQKDEAMDIY-SVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGK 325
           +     + +   + IY  VD+ +     +        +N+   +SP     VF       
Sbjct: 143 ARGYSKIFRHSYLAIYDIVDISTKQVIPINVGGQRRALNLV-EWSPVGHSFVFVYQ---- 197

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERL 385
             LY  ++  S + +I+ D   S ++ +  P                  V +++     +
Sbjct: 198 NNLYYRETPTSPEIQITTDGSPSVYNGI--PD----------------WVYEEEVFSTNI 239

Query: 386 LVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNG 425
                      +SP G+ + F R    DT + L  I + G
Sbjct: 240 AT--------WFSPDGKRIAFIRF--NDTETPLMKIPIYG 269


>gi|108759702|ref|YP_628784.1| dipeptidyl peptidase IV [Myxococcus xanthus DK 1622]
 gi|108463582|gb|ABF88767.1| dipeptidyl peptidase IV [Myxococcus xanthus DK 1622]
          Length = 762

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 32/262 (12%), Positives = 82/262 (31%), Gaps = 42/262 (16%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMD-TRIDRAPKRIGNFR------------------- 257
            +SP+ + +AY   D   + ++ + D    +   +R+   R                   
Sbjct: 249 WWSPDGKALAYTESDTSGVEKLAIADALHPENDARRLAFPRAGKANARVRLGIIPITGGK 308

Query: 258 -----------SMILAPRFSSNGKRALISVQKDEAMDIYS-VDLQSNATERLTNTLFI-- 303
                        +   R+ + G   ++   + +  ++   VD ++ +T  L        
Sbjct: 309 TTWVRWDVEKYPYLATVRWPAKGPLTVLVQNRLQTEELLLAVDPRTGSTRTLLVERDDAW 368

Query: 304 ----NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY-FDPVWSPQG 358
                    +  D S  ++ ++R G  ++ +  ++G   + +       Y         G
Sbjct: 369 LTLHQTFPHWLEDGSGFLWYTERNGAGEVELRDASGKFVRSLVPPGAGFYDMAGYVEKDG 428

Query: 359 DLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKL 418
            +      + ++  +  +   G   R+  E   L+    S  G  L  + +         
Sbjct: 429 TVYFTGGPTSDERYVWRLSPGGRPTRVTSESPALELARMSKRGGLLAITSE-GPRRMRHT 487

Query: 419 YSIDLNGRNETLINTPAYASDP 440
             +  +G    +   P+ A +P
Sbjct: 488 TVMKADGT--RVGELPSVAMEP 507



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 26/181 (14%), Positives = 58/181 (32%), Gaps = 34/181 (18%)

Query: 258 SMILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATE-RLTNTLFINISASYSPDSS 314
              +   F+ + +        +   A+ +++ D+ +  T   LT    +  +        
Sbjct: 76  GRPMGTSFTPDEQTLFFLRNPEGSRALALHAFDVATGQTREHLTAERLLQRA-------- 127

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
                     +E L V      +  R+S    +SY     S  G+ +     SG+++   
Sbjct: 128 ----------RENLAVEPKARQEPARVSSRGLSSY---ALSEDGEKLL-VGLSGKQY--- 170

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
           ++ +   +   L          +SP    + + R      G  +Y +DL    E  +   
Sbjct: 171 IVTRASGKVTELKTGPGAMDVRFSPDATQVAYVR------GHDVYRLDLATNIEHQVTKG 224

Query: 435 A 435
            
Sbjct: 225 G 225


>gi|9294540|dbj|BAB02803.1| WD domain protein-like [Arabidopsis thaliana]
          Length = 418

 Score = 44.2 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 52/169 (30%), Gaps = 11/169 (6%)

Query: 191 NSLCVMDRDGANIRYLTPSR-DQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
           N   V D D    + +   R    +     SP+ + +A       D     ++D    + 
Sbjct: 227 NDCGVRDFDMERYQLVKHFRFPWPVNHASLSPDGKLLAIV----GDNPEGLIVDPNTGKT 282

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATERLTNTLFINISAS 308
            + +        A  +  +G     S   +D+   ++ +   S +   L   L    S  
Sbjct: 283 LETLSGHLDFSFASAWHPDG--VTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIRSIR 340

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
           Y+ D   +      E  + ++V   +   +     D         +SP 
Sbjct: 341 YTSDGKYMAMA---EPADFVHVYDVSNGYETEQEIDFFGEISGISFSPD 386


>gi|254881108|ref|ZP_05253818.1| dipeptidyl peptidase IV [Bacteroides sp. 4_3_47FAA]
 gi|319640115|ref|ZP_07994842.1| dipeptidyl peptidase IV [Bacteroides sp. 3_1_40A]
 gi|254833901|gb|EET14210.1| dipeptidyl peptidase IV [Bacteroides sp. 4_3_47FAA]
 gi|317388393|gb|EFV69245.1| dipeptidyl peptidase IV [Bacteroides sp. 3_1_40A]
          Length = 737

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 38/323 (11%), Positives = 95/323 (29%), Gaps = 81/323 (25%)

Query: 188 IIKNSLCVMDRDGANIRYLTPSRDQILFEPR------------FSPNQQKVAYATYDDED 235
            + N+L V   DG   +     +  +  +              +SP    +A+   D+  
Sbjct: 153 TLDNNLFVTTADGKTQQVTDEPKGIVCGQSVHRQEFGISKGTFWSPKGNLLAFYRMDESM 212

Query: 236 ILRVYLMDTRIDRAPKRIGNFRSMILAP-------------------------------R 264
           +     ++T    A      +    +                                  
Sbjct: 213 VTDYPQVNTSTRIATLEPDKYPMAGMTSHKVTVGIYNPETQKTVYLKAGDPTDRYFTNIS 272

Query: 265 FSSNGKRA-LISVQKDEAMDI-YSVDLQSNATERLTNTLFIN------ISA----SYSP- 311
           +S + K   +I + +D+   +    D ++     L +           +       + P 
Sbjct: 273 WSPDEKSVYVIELNRDQNHALLCCYDAETGEP--LKSNPLYEEKHTKYVEPQHPIVFLPW 330

Query: 312 DSSQIVFESDREGKEQLYVMQSNGS------------------DQKRISQDKEASYFDPV 353
           D ++ +++S R+G   LY+M +  S                    ++++Q          
Sbjct: 331 DHTKFIYQSQRDGYNHLYLMDTKTSVYPESHGAAAGGSYRESYKTRQLTQGNWVVQNILG 390

Query: 354 WSPQGD--LIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLI--FSRK 409
           ++ +    +I  T+ S  +     +     + RL+     +     S SG  +I  ++  
Sbjct: 391 FNEKTKEVIIMSTEVSPLQSNAYAVNVKTGKRRLIGNKDGMHHVQLSGSGNYVIDNYTSF 450

Query: 410 KDGDTGSKLYSIDLNGRNETLIN 432
                  ++      G+  +L+ 
Sbjct: 451 TI-PRNIEIVPTSGKGKTISLLT 472


>gi|221128123|ref|XP_002159846.1| PREDICTED: similar to rCG23250 [Hydra magnipapillata]
          Length = 839

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 60/176 (34%), Gaps = 12/176 (6%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G   + +  +  DG+    L    +  L+     P + + A  + D    LR++ +   I
Sbjct: 520 GTGSDEIIQIHYDGSMEMILQGHGEGELWGLAVHPFEFECATVSDD--QTLRIWNLGAHI 577

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINIS 306
               K++   +       +  NG+   + +          +D ++  T  LT      IS
Sbjct: 578 M---KKVAVLKKGGRCVCYHPNGETMAVGLNDG---SFMIMDSKTLKTLVLTKDRNEEIS 631

Query: 307 A-SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLI 361
              +SPD    V+         L V       +K + +   +      WS  G LI
Sbjct: 632 DIKFSPDG---VYLGVASHDNMLDVYHVKKGRKKAVCKGNSSYLTHFDWSKDGRLI 684


>gi|126139399|ref|XP_001386222.1| WD-repeat protein required for cell viability [Scheffersomyces
           stipitis CBS 6054]
 gi|126093504|gb|ABN68193.1| WD-repeat protein required for cell viability [Scheffersomyces
           stipitis CBS 6054]
          Length = 520

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 40/123 (32%), Gaps = 5/123 (4%)

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +    +  +   R+   + ++    FS +G+  + S   D ++ I+   L+      L  
Sbjct: 390 FWEPLKSSKPVCRMTGHQKLVNHVSFSPDGRYIV-SSSFDNSIKIWD-GLKGVFVGTLRG 447

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
            +      ++S D+  +V  S       L V                   +   WS  G 
Sbjct: 448 HVAPVYQTAWSADNRLLVSCSK---DTTLKVWDIRTRKLSVDLPGHSDEVYAVDWSMDGK 504

Query: 360 LIA 362
            +A
Sbjct: 505 RVA 507



 Score = 43.5 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 18/128 (14%), Positives = 51/128 (39%), Gaps = 12/128 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                +++    FSP+ + +  +++D+     + + D         +    + +    +S
Sbjct: 403 MTGHQKLVNHVSFSPDGRYIVSSSFDN----SIKIWDGLKGVFVGTLRGHVAPVYQTAWS 458

Query: 267 SNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGK 325
           ++  R L+S  KD  + ++  D+++      L        +  +S D  ++       GK
Sbjct: 459 AD-NRLLVSCSKDTTLKVW--DIRTRKLSVDLPGHSDEVYAVDWSMDGKRVA----SGGK 511

Query: 326 EQLYVMQS 333
           +++  + S
Sbjct: 512 DKMVRLWS 519



 Score = 41.9 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 44/148 (29%), Gaps = 7/148 (4%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L++   D  M  +     S    R+T    +    S+SPD   IV  S       + +  
Sbjct: 379 LVTASDDFTMYFWEPLKSSKPVCRMTGHQKLVNHVSFSPDGRYIVSSSF---DNSIKIWD 435

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                     +   A  +   WS    L+           +  ++       L      +
Sbjct: 436 GLKGVFVGTLRGHVAPVYQTAWSADNRLLVSCS-KDTTLKVWDIRTRKLSVDLPGHSDEV 494

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
            A  WS  G+ +        D   +L+S
Sbjct: 495 YAVDWSMDGKRVA---SGGKDKMVRLWS 519


>gi|125596206|gb|EAZ35986.1| hypothetical protein OsJ_20288 [Oryza sativa Japonica Group]
          Length = 383

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 55/153 (35%), Gaps = 8/153 (5%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
           + + S +  +     SP+++ +A       D     L+D+R  +    +        A  
Sbjct: 207 HRSASYNWPVNHTSVSPDRKLLAVV----GDDRDALLVDSRNGKVTSTLVGHLDYSFASA 262

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG 324
           +  +G+    +  +D+   ++ V   S +   L   +       YS D   ++F S+   
Sbjct: 263 WHPDGRTFA-TGNQDKTCRVWDVRNLSTSLSVLRGNIGAIRCIRYSSDGQFMLF-SEPAD 320

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
              +Y   ++   ++ I    E S      SP 
Sbjct: 321 FVHVYSAAADYKKRQEIDFFGEIS--GISLSPD 351



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 51/151 (33%), Gaps = 15/151 (9%)

Query: 297 LTNTLFINISASY---------SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEA 347
           +TN + I+ SASY         SPD   +    D   ++ L V   NG     +    + 
Sbjct: 200 ITNAIDIHRSASYNWPVNHTSVSPDRKLLAVVGD--DRDALLVDSRNGKVTSTLVGHLDY 257

Query: 348 SYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           S F   W P G   A            V     S   L      ++   +S  G+ ++FS
Sbjct: 258 S-FASAWHPDGRTFATGNQDKTCRVWDVRNLSTSLSVLRGNIGAIRCIRYSSDGQFMLFS 316

Query: 408 RKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
              D      +YS   + +    I+     S
Sbjct: 317 EPADF---VHVYSAAADYKKRQEIDFFGEIS 344


>gi|107028407|ref|YP_625502.1| 3-carboxymuconate cyclase-like [Burkholderia cenocepacia AU 1054]
 gi|105897571|gb|ABF80529.1| 3-carboxymuconate cyclase-like protein [Burkholderia cenocepacia AU
           1054]
          Length = 375

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 35/231 (15%), Positives = 75/231 (32%), Gaps = 36/231 (15%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           + + +  A+Y    +    +    +    ++      M  A R S +G+ A  SV   +A
Sbjct: 129 SGRYLFSASYGGNLLAVNRIGADGVAGDVRQTVKTGPMAHAIRQSPDGRYAFASVLGADA 188

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYS-PD---SSQIVFESDR---------EGKEQL 328
                 D  +            + + +Y  PD       VF S+          +GK  +
Sbjct: 189 WLRLPFDASTGILT-------DDTTPAYRLPDKSGPRHFVFSSNGRFAYLIDELDGKLHV 241

Query: 329 YVM---QSNGSDQKRISQDKEASYFDPVW------SPQGDLIAFTKFSGEKFAIGVMKKD 379
             +    ++    + +S      + D  W      +P G  +  ++ +    A   +   
Sbjct: 242 LALSHGDADARPIQTVSILPPDFHGDKPWGADLHLTPDGRFLYASERTSSTLAGYRVDAT 301

Query: 380 GSQERLLVEDSNLQAPT-WS--PSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             +   +   +  Q P  ++  PSG+ L+      G     L    ++G  
Sbjct: 302 SGRLARIGTFATEQQPRGFAIDPSGKYLL----AAGQLSPTLAVYRIDGHT 348


>gi|116668737|ref|YP_829670.1| peptidase S9 prolyl oligopeptidase [Arthrobacter sp. FB24]
 gi|116608846|gb|ABK01570.1| peptidase S9, prolyl oligopeptidase active site domain protein
           [Arthrobacter sp. FB24]
          Length = 709

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 33/257 (12%), Positives = 73/257 (28%), Gaps = 22/257 (8%)

Query: 146 SSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRY 205
           ++P   R +    +  +  + +    D  +      + +     ++ L  +D   A  + 
Sbjct: 215 AAPLKLRNLTPEAAGMLRNADSVVSPDGRTIYTSFDKPLAKADSRSVLVAIDVATATHKI 274

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYD---DEDILRVYLMDTRIDRAPKRIGNFRSMI-- 260
           L        F    SP+ + +   +          RV L    +    +   N R +   
Sbjct: 275 LLDREGMSYFAGPVSPDSRTLVVLSESDTTPRQAPRVKLHLLDVSAPGEPEDNLRPLAHE 334

Query: 261 -----LAPRFSSNGKRALISVQKDEAMDIYSVDLQSN-------ATERLTNTLFINISAS 308
                +   +  +G   L++   D A  ++ +   +           R+T          
Sbjct: 335 WDRWAIKAAWLPDGAALLVTADDDGASPVFRITPAAAGAGAGEDQVTRVTLDAAAYADVV 394

Query: 309 YSPDS-SQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
            SPD  S     S  E   +   +        R+    E            + I  T   
Sbjct: 395 VSPDGLSAYALRSSYEFPPEAVRIDLASGQVTRLQAPAERPRIQGSL----ERIEATAAD 450

Query: 368 GEKFAIGVMKKDGSQER 384
           G +    +   +G+  +
Sbjct: 451 GARIPAYLALPEGASAQ 467



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 34/99 (34%), Gaps = 16/99 (16%)

Query: 264 RFSSNGKRALISVQ------KDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQI 316
             S +G+R + +V        +    ++ +D        R+T +      A+++     +
Sbjct: 33  ALSPDGQRLVTTVSTLNGKGTEYVTALWELDPAGEKHARRITRSAKGEAGAAFAATGD-L 91

Query: 317 VFESDREGK--------EQLYVMQSNGSDQKRISQDKEA 347
            F S R             L+ + ++G + + +      
Sbjct: 92  YFTSARPDPDSPDDDPVSALWQLPADGGEARVVLSRAGG 130


>gi|328770134|gb|EGF80176.1| hypothetical protein BATDEDRAFT_11342 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 492

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 43/278 (15%), Positives = 93/278 (33%), Gaps = 39/278 (14%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIR---YLTPSRDQILFEPR 218
           I+      KG    R  F S + +         V   D  N R          + + +  
Sbjct: 197 IHTWTGHTKGVNAIRF-FPSTAHLLLSASMDSTVRLWDVYNDRSCLRSFHGHSKGIRDID 255

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+ +  +   A+YD      + L DT   +   +    + +    +F+ +  +  I +  
Sbjct: 256 FNNSGSRFLSASYDK----FLKLWDTETGQCISKFTT-KRIPYCVKFNPDPSKQDIFLTG 310

Query: 279 DEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESD----REGKEQL----- 328
            +   IY  D++S    +     L    + ++  D+ + V  SD    R  +  +     
Sbjct: 311 CQDKKIYQFDVRSGEIVQEYDQHLGAVNTITFVDDNRRFVTTSDDKTLRAWEVDIPVVIK 370

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
           YV + +      ++  +   +     S    ++ ++     +F I          + + +
Sbjct: 371 YVAEPDMHSMPAVTLSQNKKWLACQ-SLDNQVLIYSARD--RFRI--------NRKKVFK 419

Query: 389 D----SNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
                     P +SP  R ++      GD+  KL+  D
Sbjct: 420 GHLIAGYACQPNFSPDARYIM-----SGDSEGKLWFWD 452


>gi|327295598|ref|XP_003232494.1| WD repeat-containing protein [Trichophyton rubrum CBS 118892]
 gi|326465666|gb|EGD91119.1| WD repeat-containing protein [Trichophyton rubrum CBS 118892]
          Length = 331

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 43/258 (16%), Positives = 78/258 (30%), Gaps = 39/258 (15%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRD--------QILFEPRFSPNQQKVAYATYDDE--- 234
           + + ++ L    +DG    +   S++           F   +SP+   +     DD    
Sbjct: 64  NPVKESELASCSKDGTVRFWDVRSKNCVGRVDVGGEAFSLAWSPDGSVLLAGRMDDTLVP 123

Query: 235 -DILRVYLMDTRIDRAPKRIGNFR------------SMILAPRFSSNGKRALISVQKDEA 281
             +  V +       APK    ++             +  +  F  N    L     D  
Sbjct: 124 ISVEPVAMSTNPAPNAPKAPSTYKALSHHKQPIRTNGIAFSHSFEPN----LFLTTGDGT 179

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR- 340
           + I S     N    L       +  S +P +  +       G   + +  +     +R 
Sbjct: 180 VKIESYP-SFNTLHTLNAHTAACLCVSLAPTARYLAIG---GGDSLISLWDTTNWVCQRT 235

Query: 341 ISQDKEASYFDPVWSPQGDLIA----FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP- 395
           +S +   +     WS  G  I      T   G    I   +   S   +   +SN+  P 
Sbjct: 236 VSSNGGGAVRGISWSWDGRFIVGACDETDCGGTGLEIFHAETGDSVYTIPTGNSNVGVPA 295

Query: 396 -TWSPSGRSLIFSRKKDG 412
             W PS   L +S   +G
Sbjct: 296 VAWHPSRYCLAYSLYAEG 313


>gi|302853790|ref|XP_002958408.1| eukaryotic translation initiation factor 3b [Volvox carteri f.
           nagariensis]
 gi|300256288|gb|EFJ40558.1| eukaryotic translation initiation factor 3b [Volvox carteri f.
           nagariensis]
          Length = 699

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 62/210 (29%), Gaps = 31/210 (14%)

Query: 219 FSPNQQKVA-YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
           +SP++  +A Y+        R+ L+        ++        +   +   G    + V+
Sbjct: 357 WSPSEPLLAAYSAEQGNQPARIVLIKLPERTEIRQKNMLNVSDVKLYWHPQGTYLAVKVE 416

Query: 278 ------------------KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
                             KD+ + +   +L++N    L        + ++ P   +    
Sbjct: 417 AWTKTKKSTTTSFQIFCVKDKDVPLEVFELKNNKERVL--------NFAWEPKGHRFAVV 468

Query: 320 SDREGKEQL--YVMQSNGS--DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
                +  +  + M+   S    + +      +     WSPQG  I           +  
Sbjct: 469 HGDGPRPSISFFTMRDEKSRLGVRELKLLDNRACNAISWSPQGRNIVLAGLKNFNGQLEF 528

Query: 376 MKKDGSQERLLVEDSNLQAPTWSPSGRSLI 405
              D  +     E        W P+GR + 
Sbjct: 529 FNVDEMETMATAEHFMATDVEWDPTGRYVA 558


>gi|297676739|ref|XP_002816282.1| PREDICTED: THO complex subunit 3-like [Pongo abelii]
          Length = 351

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 82/242 (33%), Gaps = 15/242 (6%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           SV SG  +  L + +   G +      +    +    +S + +++A  ++D      V+L
Sbjct: 26  SVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSFD--KTASVFL 83

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++                +    +  +     ++   D+ + I+  D+++       NT 
Sbjct: 84  LEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIW--DVRTTKCIATVNTK 141

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
             NI+  +SPD   I       G +   V   +    +  ++++     +   W+   ++
Sbjct: 142 GENINICWSPDGQTIAV-----GNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNM 196

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             F         I    +    + +    SN     + P G+   +      D    L+ 
Sbjct: 197 F-FLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGK---YFATGSADALVSLWD 252

Query: 421 ID 422
           +D
Sbjct: 253 VD 254



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 29/230 (12%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R    S DQ+ + P  +P+     + T   +  +R++  D R  +    + N +   +
Sbjct: 94  NYRGHGDSVDQLCWHPS-NPD----LFVTASGDKTIRIW--DVRTTKCIATV-NTKGENI 145

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +G+   +  + D    I +   +S A E+     F     S++ D++       
Sbjct: 146 NICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ---FKFEVNEISWNNDNNMFFLT-- 200

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G   + ++        +      ++     + P G   A          + +   D  
Sbjct: 201 -NGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADA---LVSLWDVD-- 254

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDG------DTGSKLYSI 421
           +   +   S L  P    ++S  G+ L  + +         +TG KL+ +
Sbjct: 255 ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEV 304



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 46/161 (28%), Gaps = 25/161 (15%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDT--RIDRAPKRIGNFRSMILAPRFSSNGKRAL---- 273
           S       + +        V  M    R     +      + + +  +S +G+R      
Sbjct: 16  SGPGSMAQWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSF 75

Query: 274 ------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                   ++KD  +   +     ++ ++L             PD    +F     G + 
Sbjct: 76  DKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSN-------PD----LFV-TASGDKT 123

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + +     +     + + +    +  WSP G  IA      
Sbjct: 124 IRIWDVRTTKCIA-TVNTKGENINICWSPDGQTIAVGNKDD 163


>gi|225164438|ref|ZP_03726697.1| hypothetical protein ObacDRAFT_6597 [Opitutaceae bacterium TAV2]
 gi|224800961|gb|EEG19298.1| hypothetical protein ObacDRAFT_6597 [Opitutaceae bacterium TAV2]
          Length = 440

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 31/241 (12%), Positives = 74/241 (30%), Gaps = 63/241 (26%)

Query: 261 LAPRFSSNGKRALISVQKDEA-MDIYSVDLQSNATERLTNT---------------LFIN 304
            +P  + + +  ++  ++D    + ++++  S    RLTN                  I 
Sbjct: 86  TSPSVTRDDRWLVLLSERDGGSPNFFAIERASGLIHRLTNNTQGSLASYCYPSENRSGIG 145

Query: 305 -ISASYSPDSSQIVFESDREGKEQLYVMQSNGS--DQKRISQDKEASYFDPVWSPQGDLI 361
             S    PD + + +        +++ +   G    QK  +            S  G  +
Sbjct: 146 KSSPCLDPDRNILYYIK----GYEVWRVSLEGDRVPQKLATLPAGWWTAFTHVSADGRWL 201

Query: 362 AFTKFSGEKF-------------------------AIGVMKKDGSQERLLVE-DSNLQAP 395
                  + F                          I +++    + R+L E    +   
Sbjct: 202 CVPCTHPDAFPPGQSTQWEQLDNMYPRLKDKGLVSRIYLIETATGRSRILAELPFWVTHV 261

Query: 396 TWSPS--GRSLIFS----RKKDGDTGSKLYSIDLNGRNETLINTPA-------YASDPQW 442
            ++P   G+ L+ S      + G    +++ ++ +G +  L            +A D  W
Sbjct: 262 NFAPDDSGKLLVNSEGPQSSRHGSP-PRIWCVESDGSHHPLFEQNGMRVNHENFARDQPW 320

Query: 443 V 443
           +
Sbjct: 321 I 321


>gi|224055555|ref|XP_002298537.1| predicted protein [Populus trichocarpa]
 gi|222845795|gb|EEE83342.1| predicted protein [Populus trichocarpa]
          Length = 329

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 73/183 (39%), Gaps = 15/183 (8%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           +++S +SG + +S+ + D      + +   R +    P  + +QQ + +A   +   +++
Sbjct: 128 INDSFMSGSLDHSVRIWDLRVNACQGILRLRGR----PTVAYDQQGLVFAVAMEGGAIKL 183

Query: 240 YLMDTRIDRA--PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE-- 295
           +   +          +G   + +   +FS++GK  L++   +   +IY +D         
Sbjct: 184 FDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTSN---NIYVLDAYGGEKRCG 240

Query: 296 -RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVW 354
             L  +    I A+++PD   +V  S   G   L+    N  ++               W
Sbjct: 241 FSLEPSPNTKIEATFTPDGQYVVSGS---GDGTLHAWNINMRNEVSCWNSHIGIASCLKW 297

Query: 355 SPQ 357
           +P+
Sbjct: 298 APR 300


>gi|195168990|ref|XP_002025313.1| GL13421 [Drosophila persimilis]
 gi|194108769|gb|EDW30812.1| GL13421 [Drosophila persimilis]
          Length = 560

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 42/237 (17%), Positives = 85/237 (35%), Gaps = 19/237 (8%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +    GD  +RI  ++ S            ++ DG      T ++D    +  ++ +   
Sbjct: 230 LASGSGDSTARIWNMTGSKAHSSQLVLRHCIETDG---PQFTGNKDVTSLD--WNCDGSM 284

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
           +A  +YD     R++  D         +G  +  I A +++  G   + S   D+   I+
Sbjct: 285 LATGSYD--GYARIWKTD---GSLTLTLGQHKGPIFALKWNKYGNYIV-SAGVDKTTIIW 338

Query: 286 SVDLQSNATERLTNTLFINISASYSPD-SSQIVFESDREGKEQLYVMQSNGSDQKRISQD 344
             D  +    + T     + + +   D  +   F S     ++++V +   ++  +    
Sbjct: 339 --DASTG---KCTQQFAFHSAPALDVDWQTSQAFASCST-DQRIFVCRLGETEPLKTFCG 392

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSG 401
                    W PQG L+A          I  M +D   + LL     +    WSP+G
Sbjct: 393 HTNEVNAIKWCPQGLLLASCS-DDLTLKIWTMNRDRCCQDLLAHSKEIYTIKWSPTG 448



 Score = 39.2 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 58/166 (34%), Gaps = 17/166 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG-------- 269
           ++ P    +A  + D    L + +     DR  + +      I   ++S  G        
Sbjct: 401 KWCPQGLLLASCSDD----LTLKIWTMNRDRCCQDLLAHSKEIYTIKWSPTGPSTNNPNM 456

Query: 270 KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY 329
              L S   D  + ++ V+ + +    L+       S ++SPD   +   S     + ++
Sbjct: 457 NLVLASASFDSTVRLWDVE-RGSCIYTLSKHTEPVYSVAFSPDGKHLASGSF---DKCVH 512

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
           +  +   +    S       F+  W+  G  +  +   G+ F + +
Sbjct: 513 IWSTQTGELVH-SYKGTGGIFEVCWNSDGSKVGASASDGDIFVLDL 557


>gi|116191725|ref|XP_001221675.1| hypothetical protein CHGG_05580 [Chaetomium globosum CBS 148.51]
 gi|88181493|gb|EAQ88961.1| hypothetical protein CHGG_05580 [Chaetomium globosum CBS 148.51]
          Length = 299

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 34/221 (15%), Positives = 69/221 (31%), Gaps = 38/221 (17%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD 288
            +    D   +  + T  +   +        +        G    IS   D  + I+++ 
Sbjct: 39  CSRRKTDKDAIRYLATHDNSFIRYFEGHEGTVTNLALHP-GADNFISCSVDNTVRIWNI- 96

Query: 289 LQSNATERLTNTLFINIS--ASYSPDSSQIVFESDREGKEQLY-----------VMQSNG 335
                T++ T  LF+N    +++ P  +     S   G   LY           V     
Sbjct: 97  ----GTKQWTGKLFLNTPYLSAWDPSGNVFAVASPGSGSILLYDYRNYEKAPFSVFDVLK 152

Query: 336 SDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAI--------GVMKKDGSQERLL- 386
           +     ++     +    +S  G  I         F +          +KK G+  R L 
Sbjct: 153 ARGPADTEASFRGWTKLEFSNDGKHILLGSRGNGHFLLDSFDGSLKAYLKKPGASTRRLG 212

Query: 387 ---VEDSNLQA---PTWSPSGRSLIFSRKKDGDTGSKLYSI 421
              +E  N+++     ++P GR +I      G +   ++  
Sbjct: 213 VGEMEGGNMESSGECCFAPDGRYVI----SGGKSDLLVWDT 249


>gi|255721829|ref|XP_002545849.1| hypothetical protein CTRG_00630 [Candida tropicalis MYA-3404]
 gi|240136338|gb|EER35891.1| hypothetical protein CTRG_00630 [Candida tropicalis MYA-3404]
          Length = 389

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/191 (14%), Positives = 57/191 (29%), Gaps = 24/191 (12%)

Query: 205 YLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPR 264
            +    D+ +     SP+  ++   + D   ++      T   +    +          R
Sbjct: 54  TVLKDHDKTVTSVDISPDGSRILTCSQDRNALVWEKDPTTGDFKPTLVLLRINRSATCCR 113

Query: 265 FSSNGKR---------ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISAS------Y 309
           ++ +G++           I   ++E     S  L+      +T    I+   +       
Sbjct: 114 WAPDGRKFAVGSSDRIIAICYYEEENDWWVSKHLKKPLKSTIT---SIDWHPNGVLLACG 170

Query: 310 SPDSSQIVFESDREG---KEQLYVMQSNGSDQKR---ISQDKEASYFDPVWSPQGDLIAF 363
           S D    VF +  +G   K Q  V  +    Q      + +  A      +S  GD + +
Sbjct: 171 STDGHVRVFSAYIKGIDSKPQPSVWGTKLPFQTLCGDFTNETSAWIHGVKFSNDGDSLGY 230

Query: 364 TKFSGEKFAIG 374
                    I 
Sbjct: 231 VSHDSSLGFIY 241



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 37/109 (33%), Gaps = 11/109 (10%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSN--GSDQKRIS--QDKEASYFDPVWSPQGDLIAFT 364
           +SPD S +    D E   ++Y + +N   S  + I+  +D + +      SP G  I   
Sbjct: 21  FSPDRSILAITKDNE--VEIYKISTNNLSSKPQLITVLKDHDKTVTSVDISPDGSRILTC 78

Query: 365 KFSGEKFAIGVMKKDGSQER----LLVEDSNLQAPTWSPSGRSLIFSRK 409
                   +          +    LL  + +     W+P GR       
Sbjct: 79  SQD-RNALVWEKDPTTGDFKPTLVLLRINRSATCCRWAPDGRKFAVGSS 126


>gi|260807407|ref|XP_002598500.1| hypothetical protein BRAFLDRAFT_66877 [Branchiostoma floridae]
 gi|229283773|gb|EEN54512.1| hypothetical protein BRAFLDRAFT_66877 [Branchiostoma floridae]
          Length = 915

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 54/136 (39%), Gaps = 32/136 (23%)

Query: 264 RFSSNGKRALISV------QKDEAMDIYSVDLQSNATERLTNTLFINIS-ASYSPDSSQI 316
           R S + +  L+S       +     +    D+Q +         + ++  A+++P   ++
Sbjct: 136 RVSPDMQYVLLSYNYRKVFRHSFTANCLIYDVQGSVVTAWI--PYDDVQYAAWAPVGHKL 193

Query: 317 VFESDREGKEQLYV-MQSNGSDQKRISQDK-EASYFDPV-----------------WSPQ 357
           VF      K  +Y+    +G+D + I+ D  E   F+ V                 WS  
Sbjct: 194 VFVY----KNNIYLKTDFSGNDSQPITTDGMEGVIFNGVPDWVYEEEVFSTDHTIWWSSD 249

Query: 358 GDLIAFTKFSGEKFAI 373
           G+L+AF KF+  +  I
Sbjct: 250 GNLLAFAKFNDTQVPI 265


>gi|193783528|dbj|BAG53439.1| unnamed protein product [Homo sapiens]
          Length = 615

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 76/230 (33%), Gaps = 27/230 (11%)

Query: 184 VVSGIIKNSLCVMDRDG-----ANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDIL 237
           V     +  L  +  +G          +     + +   RF P     +A ++YD    L
Sbjct: 342 VAGEDARIRLWRVPAEGLEEVLTTPETVLTGHTEKICSLRFHPLAANVLASSSYD----L 397

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V + D +      ++   +  I +  +S +G++   +V KD  + +Y          + 
Sbjct: 398 TVRIWDLQAGADRLKLQGHQDQIFSLAWSPDGQQLA-TVCKDGRVRVYR-PRSGPEPLQE 455

Query: 298 TNTLFINISAS--YSPDSSQIV---FESDREGKEQLYVMQS-NGSDQKRISQDKEASYFD 351
                    A   +  D   ++   F+S  E +  LY  ++  G     +  D   S   
Sbjct: 456 GPGPKGGRGARIVWVCDGRCLLVSGFDSQSERQLLLYEAEALAGGPLAVLGLDVAPSTLL 515

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPS 400
           P + P   L+  T     +  +         E L      L+  ++ SP 
Sbjct: 516 PSYDPDTGLVLLTGKGDTRVFLY--------ELLPESPFFLECNSFTSPD 557


>gi|114330941|ref|YP_747163.1| WD40 domain-containing protein [Nitrosomonas eutropha C91]
 gi|114307955|gb|ABI59198.1| WD40 domain protein beta Propeller [Nitrosomonas eutropha C91]
          Length = 346

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 65/194 (33%), Gaps = 41/194 (21%)

Query: 288 DLQSNATERLTNTLFINISASYSPDSSQIVFESDREG---------KEQLYVM-QSNGSD 337
              S +     N+    I  +YS D    +F S REG            +++    +G  
Sbjct: 39  PAASKSMGAPINSPGTEIEITYSADGKTAIFVSTREGSIKSPGSAYNFDIWMSHNIDGIW 98

Query: 338 QKRISQDKE------------ASYFDPVWSPQGDLIAFTKFSGEKF---AIGVMKKDGSQ 382
           Q+ +    +            A   +P  S  G++I FT++  +      + V+++    
Sbjct: 99  QEPVHLGPDIDPTVGPNINTTAWELEPSLSDDGNVIYFTRYEPDNLLSGDLYVVQRVNGV 158

Query: 383 ER-------------LLVEDSNLQAPTWSPSGRSLIFSRKKDG-DTGSKLYSID-LNGRN 427
            +             +         P  +     + F+  + G    S ++ ++  +G  
Sbjct: 159 WQAPKNWNDVPELPSINTSTGEEHCPIIASDS-LIYFNYSQPGVTQESDIWKVEKKDGVW 217

Query: 428 ETLINTPAYASDPQ 441
           +  ++  +  + PQ
Sbjct: 218 QKPVSLGSKINSPQ 231


>gi|91078224|ref|XP_969612.1| PREDICTED: similar to WD repeat-containing protein slp1 [Tribolium
           castaneum]
 gi|270002363|gb|EEZ98810.1| hypothetical protein TcasGA2_TC001383 [Tribolium castaneum]
          Length = 519

 Score = 44.2 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 75/242 (30%), Gaps = 31/242 (12%)

Query: 200 GANI--RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR 257
           GANI  + +    ++    P    N  +V Y     +    V   +  I +AP RI +  
Sbjct: 142 GANIDSQKILSYTNKPPTAPAGFQNPMRVIYTQ--TKTPASVKSNNRYIPQAPDRILDAP 199

Query: 258 SMILA-----PRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI--SASYS 310
            ++         +S+ G    +++       +Y  +  +   E L      +   S ++ 
Sbjct: 200 DIVDDYYLNLMDWSA-GNVLAVAL----GAHVYLWNAGTGNIEDLLELQGNDYVCSLAWI 254

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
            D   +       G  +L+    +    KR+      S      S    ++     SG+ 
Sbjct: 255 QDGDHLA-VGTTNGTVELW----DCGRAKRLRVMDGHSARVGSLSWNSYVLTSGCRSGQI 309

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAPT---WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
                      +  +     + Q      WSP GR L        D    ++     G +
Sbjct: 310 IH---HDVRQREHIITTLSGHTQEVCGLKWSPDGRYLA---SGGNDNVLNIWQ-SQTGSH 362

Query: 428 ET 429
            T
Sbjct: 363 HT 364


>gi|325183591|emb|CCA18051.1| WD domaincontaining protein putative [Albugo laibachii Nc14]
          Length = 426

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/174 (13%), Positives = 52/174 (29%), Gaps = 18/174 (10%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
                +   +FSP+   +A A+ D      V L D               ++ + +F   
Sbjct: 100 GHSNWVRSAQFSPDAHMIASASDDK----TVRLWDVEKRECLHTFYEHAGIVNSVQFHLE 155

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFIN---ISASYSPDSSQIVFESDREGK 325
           G+    S   D +++I+     +   + + +    +    S ++ P  + +V  S     
Sbjct: 156 GQWVA-SCSSDRSINIW----DTRTHKLIHHYRAHDSNVTSLAFHPSGNYLVSTST---D 207

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD 379
             + +               + +     +S     IA          + V   D
Sbjct: 208 HSIKLWDIREGQLLYTIHGHDGAVNCANFSHDSKYIASGSVDTT---LMVWNAD 258



 Score = 43.1 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 29/260 (11%), Positives = 78/260 (30%), Gaps = 30/260 (11%)

Query: 150 SWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS 209
           +++ + H     +Y       GD          +  S      L      G ++  +   
Sbjct: 11  AYQYLGHK--GPVYDVCFSPAGD--------LLASASQDRSVRLWTPTVRGYSV--VIKG 58

Query: 210 RDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNG 269
               +    FS + +++  A+ D      + +      R    +    + + + +FS + 
Sbjct: 59  HAGGVRSVCFSYSAKQLLTASDDM----SIKIWSLPSRRFMCSLIGHSNWVRSAQFSPDA 114

Query: 270 KRALISVQKDEAMDIYSVDLQSNA-TERLTNTLFINISASYSPDSSQIV-FESDREGKEQ 327
                S   D+ + ++  D++             I  S  +  +   +    SDR     
Sbjct: 115 HMIA-SASDDKTVRLW--DVEKRECLHTFYEHAGIVNSVQFHLEGQWVASCSSDRS---- 167

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLV 387
           + +  +         +  +++     + P G+ +  T       +I +      Q    +
Sbjct: 168 INIWDTRTHKLIHHYRAHDSNVTSLAFHPSGNYLVSTSTD---HSIKLWDIREGQLLYTI 224

Query: 388 --EDSNLQAPTWSPSGRSLI 405
              D  +    +S   + + 
Sbjct: 225 HGHDGAVNCANFSHDSKYIA 244


>gi|324114777|gb|EGC08745.1| rhomboid family protein [Escherichia fergusonii B253]
          Length = 591

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 36/257 (14%), Positives = 82/257 (31%), Gaps = 32/257 (12%)

Query: 198 RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV------YLMDTRIDRAPK 251
             G  I+ +T            S +  K          +  +      ++ D  +++   
Sbjct: 348 ATGEIIQSITTGAHPDSLI--LSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDG 405

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS- 310
              + +        S + K  L+        +I  ++  ++  E   +    +     S 
Sbjct: 406 TGTSGKPGAWVMALSPDEKTLLVPGA--GRGNIVRINTITHQKE---DFPAGDARGVVSA 460

Query: 311 ----PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
               P + +++F  D +G  ++       S   +      + Y     SP G  +A   +
Sbjct: 461 MGFRPKNGEVIFA-DSQGISRISTGDQQASIMTQ--WCSRSVYSVEGISPDGQYLALVSY 517

Query: 367 SGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGR 426
             + + I ++  +  Q   +   S +    +S  GR + F   K+G     L  +D    
Sbjct: 518 GLQGYVI-LLNINAGQIIGVYPASYVNHLHFSADGRKI-FVMAKNG-----LIQMDRT-- 568

Query: 427 NETLINTPAYASDPQWV 443
               ++  A    PQ+ 
Sbjct: 569 --RSLDPQAIIRHPQYG 583


>gi|323435973|ref|ZP_01049351.2| OmpA family protein [Dokdonia donghaensis MED134]
 gi|321496288|gb|EAQ39323.2| OmpA family protein [Dokdonia donghaensis MED134]
          Length = 547

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 21/134 (15%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR---------ISQDKEASYFDPVWSPQG 358
           ++S D + + F   +E   Q + +     + +R         +S + + S  +P  S  G
Sbjct: 142 AFSQDGNTLYFTQSKEDHTQSFELYRAEMNPEREGEWINITALSVNGDYSVENPHLSRNG 201

Query: 359 DLIAFTKFSGEK------FAIGVMKKD--GSQERL---LVEDSNLQAPTWSPSGRSLIFS 407
           + + F+    E       F I V   +  G  ER+   +    + + P  S  G+ L FS
Sbjct: 202 EWLYFSSNKPEAIGGFDIFRIAVKDNELIGKAERIEGSVNTVLDEKFPQTSLDGKYLYFS 261

Query: 408 RK-KDGDTGSKLYS 420
            K  D   G  ++ 
Sbjct: 262 SKGHDSQGGYDIFR 275



 Score = 38.1 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 68/180 (37%), Gaps = 26/180 (14%)

Query: 174 NSRILFVSESVVSGIIKNSLCVMDRDGA------NIRYLTPSRDQILFEPRFSPNQQKVA 227
           +   L+ ++S         L   + +        NI  L+ + D  +  P  S N + + 
Sbjct: 146 DGNTLYFTQSKEDHTQSFELYRAEMNPEREGEWINITALSVNGDYSVENPHLSRNGEWLY 205

Query: 228 YATYDDE-----DILRVYLMDTRIDRAPKRIGNFRSMILA---PRFSSNGKRALISVQKD 279
           +++   E     DI R+ + D  +    +RI    + +L    P+ S +GK    S +  
Sbjct: 206 FSSNKPEAIGGFDIFRIAVKDNELIGKAERIEGSVNTVLDEKFPQTSLDGKYLYFSSKGH 265

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF----------ESDREGKEQLY 329
           ++   Y  D+  +   +L      N+ ++ +    ++ F           S+R+G    Y
Sbjct: 266 DSQGGY--DIFRSRKSKLGFVSTRNLGSTINSPKDEVAFIQANENIGYMTSNRDGGNGGY 323


>gi|296196887|ref|XP_002746035.1| PREDICTED: WD repeat-containing protein 1 isoform 1 [Callithrix
           jacchus]
          Length = 609

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 44/282 (15%), Positives = 89/282 (31%), Gaps = 50/282 (17%)

Query: 55  FVSIDELGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTG 114
           F S+ ++   VS+++  D + ++      +    + I NP     + +     A  +V  
Sbjct: 9   FASLPQVERGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTE----HAHQVVVA 64

Query: 115 RVIKEG----KDRLRVEFRLWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEK 170
           R    G       +  + R+WD   ++ ++  ++       + IA               
Sbjct: 65  RYSPSGFYIASGDVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIA--------------- 109

Query: 171 GDFNSRILFVSESVVSGIIKNSLC-----VMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
              +S+ + V            L      V +  G N   +  S D     P        
Sbjct: 110 WTEDSKRIAVVGEGREKFGAVFLWDSGSSVGEITGHN--KVINSVDIKQSRPYRLATGSD 167

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
              A + +    +              IG+    +   RFS +G R   +   D    IY
Sbjct: 168 DNCAAFFEGPPFKFKFT----------IGDHSRFVNCVRFSPDGNRFA-TASADG--QIY 214

Query: 286 SVDLQSNATE-RLTNTLFINIS------ASYSPDSSQIVFES 320
             D ++      L  +   +         ++SPDS+ ++  S
Sbjct: 215 IYDGKTGEKVCALGGSKAHDGGIYAVSMNTWSPDSTHLLSAS 256


>gi|291243782|ref|XP_002741779.1| PREDICTED: will die slowly-like [Saccoglossus kowalevskii]
          Length = 420

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 6/120 (5%)

Query: 201 ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMI 260
             +++      + +   +FSPN + +A ++ D      + +      +  K I   +  I
Sbjct: 62  YTLKFTLAGHTKAVSAVKFSPNGEWLASSSADK----LIKIWGAYDGKFEKTITGHKLGI 117

Query: 261 LAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFES 320
               +SS+  R L+S   D+ + I+ ++      + L          +++P S+ IV  S
Sbjct: 118 SDVAWSSD-SRLLVSASDDKTLKIWELN-SGKCLKSLKGHSNYVFCCNFNPQSNLIVSGS 175


>gi|193627197|ref|XP_001950365.1| PREDICTED: f-box-like/WD repeat-containing protein ebi-like
           [Acyrthosiphon pisum]
          Length = 495

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 17/177 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +   ++ P    +A  + D      + +   + D     +      I   ++S
Sbjct: 325 FQGHTNEVNAIKWDPQGNLLASCSDDM----TLKIWSMKQDTCVHDLQAHNKEIYTIKWS 380

Query: 267 SNG--------KRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             G           L S   D  + ++ V+ +      LT       S ++SPD   +  
Sbjct: 381 PTGPGTANPNMNLILASASFDSTVRLWDVE-RGACIHTLTKHTEPVYSVAFSPDGKFLAS 439

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            S     ++   + S  S Q   S       F+  W+ +GD +  +   G  F + +
Sbjct: 440 GSF----DKCVHIWSTQSGQLVHSYKGTGGIFEVCWNSRGDKVGASASDGSVFVLDL 492


>gi|171686208|ref|XP_001908045.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943065|emb|CAP68718.1| unnamed protein product [Podospora anserina S mat+]
          Length = 519

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 31/208 (14%), Positives = 58/208 (27%), Gaps = 49/208 (23%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGK--------- 270
           SP+ Q +A        I  V      +    K   +F   IL  ++S + +         
Sbjct: 16  SPDGQHIATLLSSLVHIRAV--RSPEVVNVIKLPQDFAGPILGFQWSPSSRLLLIAGPEQ 73

Query: 271 -RALISVQKDEAMDIYSVDLQSNATER------------------------LTNTLF--I 303
            R + ++       I +  +                               LT++    I
Sbjct: 74  VRVVSALDSSFHAAIRTASVPGTKPAYVGFGASDAEVCVISSYGLKFSLFDLTSSRAAEI 133

Query: 304 NISASYSPDSSQIVFE-----------SDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
           N    +SP S+   F            S   GK+ + +      + +R            
Sbjct: 134 NTPKVFSPSSASRCFSFRPQTRHLALLSRVSGKDLISIHSYPTRELQRSWAPDTIDAQGI 193

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
            WSP G  +   + + +   +     DG
Sbjct: 194 TWSPDGRWLVVWESAAQGHKVIFYTSDG 221


>gi|304320561|ref|YP_003854204.1| peptidase S9, prolyl oligopeptidase [Parvularcula bermudensis
           HTCC2503]
 gi|303299463|gb|ADM09062.1| peptidase S9, prolyl oligopeptidase [Parvularcula bermudensis
           HTCC2503]
          Length = 765

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 11/126 (8%)

Query: 304 NISASYSPDSSQIVFESDREGKEQ-LYVMQSNGSDQKRISQDKEASYFDPVW-------- 354
           + SA   PD     +   REG +  +Y  +      + +  D +A   D  +        
Sbjct: 149 DESAVPMPDGPYAYYVRYREGGDYPVYARRPRDGGDEDVIYDGDAERGDASFFDIGGVDV 208

Query: 355 SPQGDLIAFT--KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
           SP   L+A++  +   E F + + + D  +E   V  S      W+   +S  +  + D 
Sbjct: 209 SPDHRLLAYSIDRLGSEYFDMKIRQLDTGKEYDEVIPSTDGDAVWAADSQSFFYVERDDN 268

Query: 413 DTGSKL 418
               ++
Sbjct: 269 QRPKRV 274


>gi|71028554|ref|XP_763920.1| hypothetical protein [Theileria parva strain Muguga]
 gi|68350874|gb|EAN31637.1| hypothetical protein TP04_0285 [Theileria parva]
          Length = 470

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 41/242 (16%), Positives = 78/242 (32%), Gaps = 36/242 (14%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           SG    ++ + D                +    +SP+     Y         +V + + +
Sbjct: 117 SGSGDTTVRIWDLATQTPIKTFTGHTNWVMSISWSPDG----YTLSSGGMDNKVIIWNPK 172

Query: 246 IDRAPKRIGNFRSMILAPRFSS----NGKR--ALISVQKDEAMDIYSVDLQSNATERLTN 299
                   G+ +  + A  +      +      L S   D  + I+  +++S    R+ +
Sbjct: 173 TGSGTDLKGHTK-AVTALSWQPLHNLDANEYPLLASGSMDYTVRIW--NVKSFVCVRVLS 229

Query: 300 TLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
                IS   +S +  + +F S R+   +++    +GS  K +       + + + S   
Sbjct: 230 GHTKGISQVLWSAEFKERLFSSSRDTLIKVWNTN-DGSLVKDL--KGHGHWINTLTSNVN 286

Query: 359 DLIAFTKFSGEKFAIGVMKKD-------------------GSQERLLVEDSNLQAPTWSP 399
            LI    FS E F  G  K D                     QERLL    +     W P
Sbjct: 287 RLIKSGPFSPENFESGKCKFDSMEEMIKESKKIYEKFKVESGQERLLSGSDDNTMFIWLP 346

Query: 400 SG 401
           + 
Sbjct: 347 NS 348



 Score = 41.5 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 50/133 (37%), Gaps = 5/133 (3%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDL 289
           +  D++ + ++L ++  ++   R+   + +I    FSSNG+    S   D+++ I+   +
Sbjct: 334 SGSDDNTMFIWLPNSDSNKPLHRLTGHQQLINHVSFSSNGRYFA-SASFDKSIRIW-CGI 391

Query: 290 QSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASY 349
                  L   +      ++S   + +V  S       L +  +     K          
Sbjct: 392 TGKYLRTLRGHIGRVYRVAWSCRGNYLVSASS---DSTLKLWDAESGKLKFDLPGHADQV 448

Query: 350 FDPVWSPQGDLIA 362
           +   WS  G  +A
Sbjct: 449 YTLDWSNCGKTVA 461



 Score = 41.5 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 57/170 (33%), Gaps = 24/170 (14%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVM--DRDGANIRYLTPSRDQILFEPRF 219
           IY+    E G          E ++SG   N++ +   + D     +      Q++    F
Sbjct: 319 IYEKFKVESG---------QERLLSGSDDNTMFIWLPNSDSNKPLHRLTGHQQLINHVSF 369

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           S N +  A A++D      + +      +  + +      +    +S  G   + S   D
Sbjct: 370 SSNGRYFASASFDK----SIRIWCGITGKYLRTLRGHIGRVYRVAWSCRGNYLV-SASSD 424

Query: 280 EAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQIVFESDREGKEQL 328
             + ++  D +S   +  L        +  +S     +       GK ++
Sbjct: 425 STLKLW--DAESGKLKFDLPGHADQVYTLDWSNCGKTVA-----SGKNKI 467


>gi|307111192|gb|EFN59427.1| hypothetical protein CHLNCDRAFT_137967 [Chlorella variabilis]
          Length = 1148

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 46/126 (36%), Gaps = 17/126 (13%)

Query: 221 PNQQKVAYATYDDE-DILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           P  + +A A+     D   ++L DTR      ++      +    FS +G+    S  +D
Sbjct: 663 PAGRYLASASRAQSADAAAIWLWDTRKWVGCAQLHTHTLTVTQLAFSPDGRWLA-SASRD 721

Query: 280 EAMDIY--------------SVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGK 325
             + ++              +         R+     I  +  +SPD   +   + R+GK
Sbjct: 722 RTVAVFERQPATAGGAGAPEAAAAAFRLVGRIKAHTRIVWALHWSPDGRLLA-TASRDGK 780

Query: 326 EQLYVM 331
            +++ +
Sbjct: 781 VKVWRL 786



 Score = 37.3 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/81 (14%), Positives = 30/81 (37%), Gaps = 12/81 (14%)

Query: 218 RFSPNQQKVAYATYD--------DEDILRVYLMDTRIDRAPKRIGNFRSM---ILAPRFS 266
            FSP+ + +A A+ D                        A + +G  ++    + A  +S
Sbjct: 707 AFSPDGRWLASASRDRTVAVFERQPATAGGAGAPEAAAAAFRLVGRIKAHTRIVWALHWS 766

Query: 267 SNGKRALISVQKDEAMDIYSV 287
            +G+    +  +D  + ++ +
Sbjct: 767 PDGRLLA-TASRDGKVKVWRL 786


>gi|307719044|ref|YP_003874576.1| hypothetical protein STHERM_c13630 [Spirochaeta thermophila DSM
           6192]
 gi|306532769|gb|ADN02303.1| hypothetical protein STHERM_c13630 [Spirochaeta thermophila DSM
           6192]
          Length = 927

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 8/115 (6%)

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV---FESDREGKEQLYVMQSNG 335
           +   D++ +D+ +    RLT T         S D + +V   F   R+ + Q++++   G
Sbjct: 360 EGWADLWYMDIATGTKRRLT-TRGRYYGVGLSDDGTVLVGLWFSRSRDAQLQVFLLDRPG 418

Query: 336 SDQKR----ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL 386
           S         +        +   SP  + +A    S    ++ ++    +    L
Sbjct: 419 SLPPAPFFSYTFPHGEVPSEVAVSPDKETLAVVVHSPAGVSLQLLHIPTATRTTL 473


>gi|259484585|tpe|CBF80935.1| TPA: SepB protein [Source:UniProtKB/TrEMBL;Acc:Q00210] [Aspergillus
           nidulans FGSC A4]
          Length = 836

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 73/242 (30%), Gaps = 35/242 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            ++P+ + +   T      +R+Y      +      G    + +                
Sbjct: 21  TYTPDGRYII--TGGSNSAIRIYTDGEDGEPKTVEEGADAHLAIGAT-----NEYFFMGA 73

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
           +D  +  Y V       + LT T       + + D+  +   SD     +L V   N  D
Sbjct: 74  EDGTVWQYEV-KSGRMDKLLTRTALAVRDIAITKDNGWVAVASD-----ELTVKLVNIED 127

Query: 338 QKRISQDKEASYFDPVWS--PQGDLIAFTKFSGEKFAIGVMK---------KDGSQERLL 386
             ++   +E +      +  P G  +A +   G  + +  M           DG   RL 
Sbjct: 128 MTKVKYMREQTKGTKHITFDPNGRYVAVSCTDGIVY-LYSMDTEEPELARKLDGVIRRLE 186

Query: 387 VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN----TPAYASDPQW 442
            ED       W P G    F+   D      L+S+   G  +  ++         +   W
Sbjct: 187 PEDEATARVVWHPDGT--AFAT-ADASRDIALFSV---GEWKKEMSFSGGHNGDITAMSW 240

Query: 443 VG 444
             
Sbjct: 241 SP 242



 Score = 43.1 bits (100), Expect = 0.094,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 72/211 (34%), Gaps = 48/211 (22%)

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--------D 279
           Y     ED   V+  + +  R  K +      +     + +     ++  +        +
Sbjct: 68  YFFMGAEDG-TVWQYEVKSGRMDKLLTRTALAVRDIAITKDNGWVAVASDELTVKLVNIE 126

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN----- 334
           +   +  +  Q+  T+ +T          + P+   +   S  +G   LY M +      
Sbjct: 127 DMTKVKYMREQTKGTKHIT----------FDPNGRYVA-VSCTDGIVYLYSMDTEEPELA 175

Query: 335 ---GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV---------MKKDGSQ 382
                  +R+  + EA+    VW P G   AF      +  I +         M   G  
Sbjct: 176 RKLDGVIRRLEPEDEATARV-VWHPDGT--AFATADASR-DIALFSVGEWKKEMSFSGG- 230

Query: 383 ERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
                 + ++ A +WSP+G +L+ +  KDG 
Sbjct: 231 -----HNGDITAMSWSPNG-ALMVTAAKDGQ 255



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 59/192 (30%), Gaps = 19/192 (9%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    ++   +     +  L       + +   + +   VA A+    D L V L++   
Sbjct: 72  GAEDGTVWQYEVKSGRMDKLLTRTALAVRDIAITKDNGWVAVAS----DELTVKLVNIED 127

Query: 247 DRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ--------SNATERLT 298
               K +           F  NG+   +S   D  + +YS+D +             RL 
Sbjct: 128 MTKVKYMREQTKGTKHITFDPNGRYVAVSCT-DGIVYLYSMDTEEPELARKLDGVIRRLE 186

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK--EASYFDPVWSP 356
                     + PD +     +D      L+ +   G  +K +S             WSP
Sbjct: 187 PEDEATARVVWHPDGTAFA-TADASRDIALFSV---GEWKKEMSFSGGHNGDITAMSWSP 242

Query: 357 QGDLIAFTKFSG 368
            G L+      G
Sbjct: 243 NGALMVTAAKDG 254


>gi|195386748|ref|XP_002052066.1| GJ17345 [Drosophila virilis]
 gi|194148523|gb|EDW64221.1| GJ17345 [Drosophila virilis]
          Length = 784

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 31/232 (13%), Positives = 73/232 (31%), Gaps = 28/232 (12%)

Query: 192 SLCVMDRDG--------ANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMD 243
           +L +   DG        A +     +    +   R+SP+   +  A  D   +++++   
Sbjct: 95  TLLICSNDGRFIILNKSARVERSISAHTAAISSGRWSPDGAGLLTAAED--GVIKIW--- 149

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFI 303
           +R       +      I   R++ +         +   + I  +   S    R      +
Sbjct: 150 SRSGMLRSTVIQSDEAIRCARWAPSSTAIAFC--QGGHISIKPLAANSK-LIRWRAHDGL 206

Query: 304 NISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            +S S+S      +  S      +  +  + G++    S  +E +     ++P+ D +  
Sbjct: 207 VLSLSWS--GQSNIIASG-GEDFRFKIWDAQGANLY-TSAAEEYAITSVAFNPEKDYLLV 262

Query: 364 TKFSGEKFAIGVMKKDG---SQERLLVED-SNLQAPTWSPSGRSLIFSRKKD 411
             F+     + +    G   S  R       +    +WS  G  +       
Sbjct: 263 GTFN----MLKLCHSTGWSYSSARFTAPSVGSFYTLSWSTDGTQVACGTSTG 310


>gi|30249188|ref|NP_841258.1| immunogenic 75 kDa protein PG4 [Nitrosomonas europaea ATCC 19718]
 gi|30180507|emb|CAD85114.1| possible immunogenic 75 kDa protein PG4 [Nitrosomonas europaea ATCC
           19718]
          Length = 349

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 40/127 (31%), Gaps = 28/127 (22%)

Query: 299 NTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
           N+    I  +YS D    +F S REG  +              S     ++         
Sbjct: 52  NSPGSEIEITYSADGKTAIFVSTREGSVE--------------SSGTPYNFD-------- 89

Query: 359 DLIAFTKFSGEKFAIGVM---KKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD-T 414
             I   +     +   V      D +    +   +    P++S  G  + F+R + GD  
Sbjct: 90  --IWMARNVDGVWQEPVHLGADIDPTVGPNINTSAWELEPSFSDDGNVIYFTRYEPGDLL 147

Query: 415 GSKLYSI 421
              LY +
Sbjct: 148 SGDLYVV 154



 Score = 38.5 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 42/241 (17%), Positives = 79/241 (32%), Gaps = 57/241 (23%)

Query: 255 NFRSMILAPRFSSNGKRALISVQKDE---------AMDIYSV-DLQSNATERL------- 297
           N     +   +S++GK A+    ++            DI+   ++     E +       
Sbjct: 52  NSPGSEIEITYSADGKTAIFVSTREGSVESSGTPYNFDIWMARNVDGVWQEPVHLGADID 111

Query: 298 ------TNTLFINISASYSPDSSQIVFESDREG---KEQLYVM------------QSNGS 336
                  NT    +  S+S D + I F     G      LYV+             ++  
Sbjct: 112 PTVGPNINTSAWELEPSFSDDGNVIYFTRYEPGDLLSGDLYVVQKVNGVWQSAKNWNDVP 171

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE---KFAIG-VMKKDGSQERLLVEDSNL 392
           +   I+      +   + S    LI F         +  I  V KKDG  ++ +   + +
Sbjct: 172 ELPSINTLTGEEHCPIIVSD--SLIYFNYSQPGVTQESDIWKVEKKDGVWQKPVSLGAKI 229

Query: 393 QAPT-----W---SPSGRSLIFSRKK---DGDTGSKLYSI--DLNGRNETLINTPAYASD 439
            +P      W   S  G+S++ +  +   D   G  ++    D  G  +  IN     + 
Sbjct: 230 NSPQRDHMHWTGVSKDGKSMVITSTRIDPDSRGGHDMWISHQDARGEWQKPINLGDVINT 289

Query: 440 P 440
           P
Sbjct: 290 P 290


>gi|331697632|ref|YP_004333871.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Pseudonocardia dioxanivorans CB1190]
 gi|326952321|gb|AEA26018.1| peptidase S9B dipeptidylpeptidase IV domain-containing protein
           [Pseudonocardia dioxanivorans CB1190]
          Length = 701

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 39/210 (18%), Positives = 63/210 (30%), Gaps = 52/210 (24%)

Query: 246 IDRAPKRIGNFRSMIL-APR---FSSNGKRALISVQKDEAMD---IYSVDLQSNATERLT 298
            D  P+R    R   L APR    S +G R      +        ++S+DL S     + 
Sbjct: 2   TDSFPRRQARTRRFTLGAPRGAVVSPDGGRVAFLRSRGGTDPVTCLWSLDLDSGEERLVA 61

Query: 299 NTLFINISAS---YSPD------------SSQIVFESDR-------EGKEQLYVMQSNGS 336
           +   +  + +     P                + + +DR           +LYV +    
Sbjct: 62  DPRALEAAGNEEDLPPQERARRERLREQAGGIVAYATDRPVTMAAFALSGRLYVAEFASG 121

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED------- 389
              R+         DP   PQG  +AF        A+ V         LLV         
Sbjct: 122 LSPRLIDTPPG-VVDPRPDPQGRRVAFVA----GGALYVHDLVPRLTSLLVRPDDEDATW 176

Query: 390 -----------SNLQAPTWSPSGRSLIFSR 408
                        ++   W+P G  L+ +R
Sbjct: 177 GLADFVAAEEMGRMRGFWWAPDGERLLAAR 206



 Score = 38.5 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 60/175 (34%), Gaps = 34/175 (19%)

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKEQ---LYVMQSNGSDQKRISQDK--EAS 348
           T R T  L     A  SPD  ++ F   R G +    L+ +  +  +++ ++  +  EA+
Sbjct: 12  TRRFT--LGAPRGAVVSPDGGRVAFLRSRGGTDPVTCLWSLDLDSGEERLVADPRALEAA 69

Query: 349 YFDPVWSPQ------------GDLIAFTKFSGEKFAIGVMK--------KDGSQERLLVE 388
             +    PQ            G ++A+        A   +           G   RL+  
Sbjct: 70  GNEEDLPPQERARRERLREQAGGIVAYATDRPVTMAAFALSGRLYVAEFASGLSPRLIDT 129

Query: 389 DSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQWV 443
              +  P   P GR + F        G  LY  DL  R  +L+  P    D  W 
Sbjct: 130 PPGVVDPRPDPQGRRVAFVA------GGALYVHDLVPRLTSLLVRP-DDEDATWG 177


>gi|307179774|gb|EFN67964.1| Dipeptidyl peptidase 4 [Camponotus floridanus]
          Length = 757

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 53/162 (32%), Gaps = 35/162 (21%)

Query: 281 AMDIYSVDLQSNATERLTNTLFIN-----ISASYSPDSSQIVFESD------REGKEQLY 329
             +I   D+ +   +R+ +          +SA++S D   I+F  +              
Sbjct: 63  NSNITIYDVVTKENKRIFDGSKWPLPYKFMSATFSADKQYILFGYNVKQVFRHTTVRNYV 122

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVED 389
           V   N S    I+   EA     +WSP G+ + +   +     I   ++  +  R L + 
Sbjct: 123 VYDVNRSTYSEIAD--EAPIVLALWSPIGNDLVYVHDNDIYHMIFNHEQ--TIVRRLTKS 178

Query: 390 SNLQA-----PTW---------------SPSGRSLIFSRKKD 411
                     P W               SP GR L F+   D
Sbjct: 179 GKFGVIYNGVPDWVYEEEVLRSAVAMWYSPDGRYLAFATFND 220



 Score = 40.4 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 59/186 (31%), Gaps = 31/186 (16%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQIL----FE 216
           +IY  +    G FN   +   E +++ I+ +++ + D      + +       L      
Sbjct: 35  EIYLQLYYSFG-FNGTWISDREIMITDIVNSNITIYDVVTKENKRIFDGSKWPLPYKFMS 93

Query: 217 PRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP----RFSSNGKRA 272
             FS ++Q + +  Y+ + + R   +   +     R         AP     +S  G   
Sbjct: 94  ATFSADKQYILFG-YNVKQVFRHTTVRNYVVYDVNRSTYSEIADEAPIVLALWSPIGNDL 152

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLF----INISASY---------------SPDS 313
           +     D    I+  + +     RLT +       N    +               SPD 
Sbjct: 153 VYVHDNDIYHMIF--NHEQTIVRRLTKSGKFGVIYNGVPDWVYEEEVLRSAVAMWYSPDG 210

Query: 314 SQIVFE 319
             + F 
Sbjct: 211 RYLAFA 216


>gi|302697711|ref|XP_003038534.1| hypothetical protein SCHCODRAFT_48129 [Schizophyllum commune H4-8]
 gi|300112231|gb|EFJ03632.1| hypothetical protein SCHCODRAFT_48129 [Schizophyllum commune H4-8]
          Length = 762

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/183 (12%), Positives = 65/183 (35%), Gaps = 7/183 (3%)

Query: 162 IYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSP 221
           +      E   ++ +   +     +G    +  +   D  +   +       +   +F P
Sbjct: 533 VVAYRGHENPIWDVKWSPMGIYFATGSRDRTARLWSTDRVSCLRIYAGHLSDVDCVQFHP 592

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           N   +A  + D        L D +     +     +  + A   S +G+    S  +D A
Sbjct: 593 NGLYLATGSSD----WTARLWDVQKGSTVRVFIGHQGNLSALAMSPDGRYLA-SAGEDLA 647

Query: 282 MDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           ++++ +       +++T       S ++S +SS +V     +   + + +++ G    ++
Sbjct: 648 INLWDL-GSGKRIKKMTGHTSSIYSLAFSGESSMLV-SGGADWTVRCWDVKAPGGYAPKM 705

Query: 342 SQD 344
           +  
Sbjct: 706 ANG 708



 Score = 43.9 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 62/173 (35%), Gaps = 18/173 (10%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISV-QKDEAMDIYSVDLQSNATER 296
           R++ MDT  +    R     + I   ++S  G     +   +D    ++S D  S    R
Sbjct: 523 RLWSMDTLTNVVAYR--GHENPIWDVKWSPMG--IYFATGSRDRTARLWSTDRVS--CLR 576

Query: 297 LTNTLFINISAS-YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWS 355
           +      ++    + P+   +      +   +L+          R+    + +      S
Sbjct: 577 IYAGHLSDVDCVQFHPNGLYLA-TGSSDWTARLW--DVQKGSTVRVFIGHQGNLSALAMS 633

Query: 356 PQGDLIAFTKFSGEKFAIGVMKKDGSQERL---LVEDSNLQAPTWSPSGRSLI 405
           P G  +A    +GE  AI +    GS +R+       S++ +  +S     L+
Sbjct: 634 PDGRYLA---SAGEDLAINLWDL-GSGKRIKKMTGHTSSIYSLAFSGESSMLV 682


>gi|294139266|ref|YP_003555244.1| dipeptidyl peptidase IV [Shewanella violacea DSS12]
 gi|293325735|dbj|BAJ00466.1| dipeptidyl peptidase IV, putative [Shewanella violacea DSS12]
          Length = 829

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 29/221 (13%), Positives = 84/221 (38%), Gaps = 13/221 (5%)

Query: 222 NQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           ++  +A    ++              R  + + ++     A ++  +G  A I ++  + 
Sbjct: 340 DEDVLAKVKSENAKAQGELYKSEETPRKIQLMQDWGWSQSAIQWQGSGHSAAIMLESLDN 399

Query: 282 MDIYS--VDLQSNATE---RLTNTLFINISAS---YSPDSSQIVFESDREGKEQLYVMQS 333
            D +   ++++  + +   RL +  ++N + +   +   +  + + S+  G   LY ++ 
Sbjct: 400 KDRWIASLNIEKGSLKTEHRLHDNAWVNYTFNQFGWVTGTDSLYYLSEETGYSHLY-LKH 458

Query: 334 NGSDQKRISQDKEASYFDPVWSPQGDLIAF--TKFSGEKFAIGVMKKDGSQERLLVEDSN 391
            G   + ++Q K          P+   I +   K       +  +     ++  L +   
Sbjct: 459 KGEQAEPLTQGKFV-VSSVTLGPKAQFIYYKANKAHPGIDNVYRVNIVTGKDEQLTQWDG 517

Query: 392 LQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLIN 432
             +   SP G SL+ +  +  +  ++L+   + G  + L +
Sbjct: 518 QLSYKLSPDGNSLLLNASRRTEP-AELFVKTIGGERKQLTH 557



 Score = 43.9 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 62/156 (39%), Gaps = 9/156 (5%)

Query: 230 TYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK--DEAMDIYSV 287
            Y  E+    +L         + +   + ++ +       +       K      ++Y V
Sbjct: 443 YYLSEETGYSHLYLKHKGEQAEPLTQGKFVVSSVTLGPKAQFIYYKANKAHPGIDNVYRV 502

Query: 288 DLQSNATERLTNTLFINISASY--SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDK 345
           ++ +   E+LT     +   SY  SPD + ++  + R  +     +++ G ++K+++   
Sbjct: 503 NIVTGKDEQLTQ---WDGQLSYKLSPDGNSLLLNASRRTEPAELFVKTIGGERKQLTHYT 559

Query: 346 EASYFDPVW-SPQGDLIAFTKFSGEKFAIGVMKKDG 380
             ++ +  W +P+   +  +  +G+ +A  V    G
Sbjct: 560 SDTFKNYPWQAPEVVAVVSSHGAGDVYA-RVYLPQG 594


>gi|239932852|ref|ZP_04689805.1| hypothetical protein SghaA1_31813 [Streptomyces ghanaensis ATCC
           14672]
          Length = 329

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 50/147 (34%), Gaps = 17/147 (11%)

Query: 306 SASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +  D   +V   +   GK ++  +   G   +++  D   +Y    +SP    +  +
Sbjct: 55  GPVFGEDGRLVVVDVTAPAGKPKVMSVDVRGKTARKVFTDSRGAYTSAQFSPYDGRLYLS 114

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-----------KDGD 413
            F+     I  +  DGS  R       +      P    + F R             +G+
Sbjct: 115 DFAHG--EIVSLAPDGSD-RRTFFTGEVDGARMRPD--DVAFDRDGNLYVSDSLGLSEGE 169

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDP 440
              ++  ID +GR  T++     A + 
Sbjct: 170 ARGRVVRIDRDGRKATVLADGLAAPNG 196



 Score = 37.3 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 50/142 (35%), Gaps = 19/142 (13%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKR 271
           +L  P F  + + V           +V  +D R   A K   + R    + +FS  +G+ 
Sbjct: 52  LLEGPVFGEDGRLVVVDVTAPAGKPKVMSVDVRGKTARKVFTDSRGAYTSAQFSPYDGR- 110

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
               +   +      V L  + ++R T        A   PD   + F  DR+G   LYV 
Sbjct: 111 ----LYLSDFAHGEIVSLAPDGSDRRTFFTGEVDGARMRPDD--VAF--DRDGN--LYVS 160

Query: 332 QSNG-------SDQKRISQDKE 346
            S G           RI +D  
Sbjct: 161 DSLGLSEGEARGRVVRIDRDGR 182


>gi|119571411|gb|EAW51026.1| WD repeat and SOCS box-containing 1, isoform CRA_a [Homo sapiens]
          Length = 251

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 35/80 (43%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 158 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 217

Query: 298 TNTLFINISASYSPDSSQIV 317
                   S ++SPDSS + 
Sbjct: 218 RGHQNWVYSCAFSPDSSMLC 237



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 1/81 (1%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 156 NGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 215

Query: 385 LLVEDSNL-QAPTWSPSGRSL 404
           +L    N   +  +SP    L
Sbjct: 216 VLRGHQNWVYSCAFSPDSSML 236


>gi|62234438|ref|NP_001014445.1| notchless protein homolog 1 isoform b [Homo sapiens]
          Length = 193

 Score = 44.2 bits (103), Expect = 0.042,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQL 328
           G   L+S   D  + ++S         R+T    +     +SPDS  +   S     + +
Sbjct: 48  GPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASF---DKSI 104

Query: 329 YVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            +            +   A+ +   WS    L+  +  S     +  +K       L   
Sbjct: 105 KLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLV-SGSSDSTLKVWDVKAQKLAMDLPGH 163

Query: 389 DSNLQAPTWSPSGRSLI 405
              + A  WSP G+ + 
Sbjct: 164 ADEVYAVDWSPDGQRVA 180



 Score = 36.9 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 62/202 (30%), Gaps = 34/202 (16%)

Query: 75  RSDVFNLISQDSFKQKITNPDSIPRFQDWNSLGAQVLVTGR-VIKEGKDRLRVEFRLWDV 133
           R+  F         Q +       + +  +      LV G+   +           LW  
Sbjct: 10  RTGAFEPAEASVNPQDLQGSLQELKERALSRYN---LVRGQGPERLVSGSDDFTLFLWSP 66

Query: 134 KDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSL 193
            + K+ +           R   H     I Q +       +SRI+       S     S+
Sbjct: 67  AEDKKPLT----------RMTGHQA--LINQVLFSP----DSRIV------ASASFDKSI 104

Query: 194 CVMDRDGANIRYL--TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            +   DG   +YL         +++  +S + + +   + D      + + D +  +   
Sbjct: 105 KLW--DGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDS----TLKVWDVKAQKLAM 158

Query: 252 RIGNFRSMILAPRFSSNGKRAL 273
            +      + A  +S +G+R  
Sbjct: 159 DLPGHADEVYAVDWSPDGQRVA 180


>gi|332227291|ref|XP_003262827.1| PREDICTED: LOW QUALITY PROTEIN: echinoderm microtubule-associated
           protein-like 4-like [Nomascus leucogenys]
          Length = 981

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 44/133 (33%), Gaps = 13/133 (9%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RL +       A + P  + +       G+   +V+ +   D   I  D        
Sbjct: 627 EWTRLVDEPGHC--ADFHPSGTVVA-IGTHSGRW--FVLDAETRDLVSIHTDGNEQLSVM 681

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWSPSGRSLIFSR 408
            +S  G+ +A        + + V+ ++G +     R     S +    WSP  + ++   
Sbjct: 682 RYSIDGNFLAVGSHDNFIY-LYVVSENGRKYSRYGRCTGHSSYITHLDWSPDNKYIM--- 737

Query: 409 KKDGDTGSKLYSI 421
              GD     + I
Sbjct: 738 SNSGDYEILYWDI 750



 Score = 40.0 bits (92), Expect = 0.80,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 11/121 (9%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F P+   VA  T+        +++D           +    +   R+S +G    +    
Sbjct: 641 FHPSGTVVAIGTHSGRW----FVLDAETRDLVSIHTDGNEQLSVMRYSIDGNFLAV-GSH 695

Query: 279 DEAMDIYSVDLQSNATERL---TNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           D  + +Y V        R    T          +SPD+  I+  S   G  ++       
Sbjct: 696 DNFIYLYVVSENGRKYSRYGRCTGHSSYITHLDWSPDNKYIMSNS---GDYEILYWDIPN 752

Query: 336 S 336
            
Sbjct: 753 G 753


>gi|326475416|gb|EGD99425.1| WD repeat protein [Trichophyton tonsurans CBS 112818]
          Length = 515

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 209 SRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSN 268
              + +    FSP+   +A A++D+     V L + R  +    +      +    FS++
Sbjct: 400 GHQKEVNHVTFSPDGVYIASASFDN----HVKLWNARDGKFIFSLRGHVGPVYQCCFSAD 455

Query: 269 GKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQI 316
             R L+S  KD  + I+  D+++      L        +  +SPD  ++
Sbjct: 456 -SRLLVSSSKDTTLKIW--DVRTGKLTMDLPGHQDEVYAVDWSPDGERV 501



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 40/131 (30%), Gaps = 6/131 (4%)

Query: 232 DDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L D  +   P  R+   +  +    FS +G     S   D  + +++    
Sbjct: 376 SASDDFTMFLWDPEVSSKPVARMLGHQKEVNHVTFSPDGVYIA-SASFDNHVKLWNA-RD 433

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 L   +       +S DS  +V  S       L +               +   +
Sbjct: 434 GKFIFSLRGHVGPVYQCCFSADSRLLVSSSK---DTTLKIWDVRTGKLTMDLPGHQDEVY 490

Query: 351 DPVWSPQGDLI 361
              WSP G+ +
Sbjct: 491 AVDWSPDGERV 501



 Score = 41.5 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 4/132 (3%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++  ++ S    R+          ++SPD   I   S       + +  
Sbjct: 374 LVSASDDFTMFLWDPEVSSKPVARMLGHQKEVNHVTFSPDGVYIASASF---DNHVKLWN 430

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +         +      +   +S    L+  +        I  ++       L      +
Sbjct: 431 ARDGKFIFSLRGHVGPVYQCCFSADSRLLV-SSSKDTTLKIWDVRTGKLTMDLPGHQDEV 489

Query: 393 QAPTWSPSGRSL 404
            A  WSP G  +
Sbjct: 490 YAVDWSPDGERV 501


>gi|261332775|emb|CBH15770.1| chromatin assembly factor 1 subunit B, putative [Trypanosoma brucei
           gambiense DAL972]
          Length = 550

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 69/206 (33%), Gaps = 26/206 (12%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPR---F 265
            +    R++PN + +A    D +  + ++  ++  D  P++  ++R     ++      F
Sbjct: 97  WMPLTARWAPNGRLIASGHCDGK--ICLWWKESGRDGEPEQWKDYRHLSGHVIDVHDVCF 154

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREG 324
           S + +  L S   D  + ++ ++  +    +L           ++ P    + + +    
Sbjct: 155 SPDSRYLL-SAGGDGTVVLHDLEGSTMPVVQLQEAHSKFCRGVAWDP---WMHYVASCGS 210

Query: 325 KEQLYVMQSNGSDQKRISQDKE-------------ASYFDPVWSPQGDLIAFTKFSGEKF 371
              LY+MQ      KR S   +             ASY    WSP G ++A       + 
Sbjct: 211 GPALYIMQGPKHGAKRASLVSQRKAQGDFIGESCSASYRRLAWSPDGAILAVPYGKVSQH 270

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTW 397
                   G         +      W
Sbjct: 271 KHSRSACSGGGSEDATAGAAAGEDRW 296


>gi|300084|gb|AAB26483.1| transcription factor TFIID dTAFII80 subunit [Drosophila
           melanogaster, embryo, Peptide, 704 aa]
 gi|447157|prf||1913437A transcription factor IID
          Length = 704

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 10/127 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L   D + A   ++    D    +  F PN   VA  + D      V L D    ++ +
Sbjct: 517 RLWATDSNQALRVFVGHLSDVDCVQ--FHPNSNYVATGSSDR----TVRLWDNMTGQSVR 570

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYS 310
            +   +  + +  FS+ G+    S   D  + I+  DL + +    L        + ++S
Sbjct: 571 LMTGHKGSVSSLAFSACGRYLA-SGSVDHNIIIW--DLSNGSLVTTLLRHTSTVTTITFS 627

Query: 311 PDSSQIV 317
            D + + 
Sbjct: 628 RDGTVLA 634


>gi|17136870|ref|NP_476957.1| TBP-associated factor 5 [Drosophila melanogaster]
 gi|1729808|sp|P49846|TAF5_DROME RecName: Full=Transcription initiation factor TFIID subunit 5;
           AltName: Full=TAFII-80; AltName: Full=Transcription
           initiation factor TFIID 85 kDa subunit; Short=p85
 gi|455764|gb|AAB29084.1| TFIID subunit p85=85 kda transcription factor [Drosophila,
           Schneider cells, embryos, Peptide, 704 aa]
 gi|458684|gb|AAC46481.1| transcription initiation factor TFIID 85 kDa subunit [Drosophila
           melanogaster]
 gi|7303687|gb|AAF58737.1| TBP-associated factor 5 [Drosophila melanogaster]
 gi|15292231|gb|AAK93384.1| LD42828p [Drosophila melanogaster]
 gi|220942360|gb|ACL83723.1| Taf5-PA [synthetic construct]
 gi|220952598|gb|ACL88842.1| Taf5-PA [synthetic construct]
          Length = 704

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 10/127 (7%)

Query: 192 SLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPK 251
            L   D + A   ++    D    +  F PN   VA  + D      V L D    ++ +
Sbjct: 517 RLWATDSNQALRVFVGHLSDVDCVQ--FHPNSNYVATGSSDR----TVRLWDNMTGQSVR 570

Query: 252 RIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYS 310
            +   +  + +  FS+ G+    S   D  + I+  DL + +    L        + ++S
Sbjct: 571 LMTGHKGSVSSLAFSACGRYLA-SGSVDHNIIIW--DLSNGSLVTTLLRHTSTVTTITFS 627

Query: 311 PDSSQIV 317
            D + + 
Sbjct: 628 RDGTVLA 634


>gi|307186838|gb|EFN72255.1| Putative actin-interacting protein 1 [Camponotus floridanus]
          Length = 564

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 34/232 (14%), Positives = 74/232 (31%), Gaps = 8/232 (3%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP 250
           NS+ + + D   I  +       +   ++SP+   +A  + D    +R++    +     
Sbjct: 38  NSVIIRNIDNPAIADIYTEHSCPVNVAKYSPSGFYIA--SGDQSGKVRIWDTVNKEHILK 95

Query: 251 KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS 310
                    I    +S + +R ++  +  E      +     +   ++       S  + 
Sbjct: 96  NEFHPIGGPIKDIAWSPDSQRMVVVGEGRERFGHVFMAETGTSVGEISGQSKPINSCDFR 155

Query: 311 PDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
           P     +     +    + V +      K   Q+         +SP G+L A   F G+ 
Sbjct: 156 PARPFRLITGSED--NTIAVFEGPPFKFKMTKQEHTRFVQTVRYSPDGNLFASGGFDGKV 213

Query: 371 FAIGVMKKDG-SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
           F       D   +         +    W P  + L+ +    GD   KL+ +
Sbjct: 214 FIYNGTTSDLIGEVGSPAHQGGVYGVAWKPDSKQLLTAS---GDKTCKLWDV 262



 Score = 40.0 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 74/210 (35%), Gaps = 41/210 (19%)

Query: 114 GRVIKEGKDRLRVEFRLWDVKDRKQIIGKKFFS----------SPASWR---------KI 154
           G  I  G    +V  R+WD  +++ I+  +F            SP S R         + 
Sbjct: 70  GFYIASGDQSGKV--RIWDTVNKEHILKNEFHPIGGPIKDIAWSPDSQRMVVVGEGRERF 127

Query: 155 AHTISDDIYQSITGEKG--------DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
            H    +   S+    G        DF     F    +++G   N++ V +      +  
Sbjct: 128 GHVFMAETGTSVGEISGQSKPINSCDFRPARPF---RLITGSEDNTIAVFEGPPFKFKMT 184

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN--FRSMILAPR 264
                + +   R+SP+    A   +D +    V++ +         +G+   +  +    
Sbjct: 185 KQEHTRFVQTVRYSPDGNLFASGGFDGK----VFIYNGTTSDLIGEVGSPAHQGGVYGVA 240

Query: 265 FSSNGKRALISVQKDEAMDIYSVDLQSNAT 294
           +  + K+ L +   D+   ++  D+++ + 
Sbjct: 241 WKPDSKQLL-TASGDKTCKLW--DVETRSL 267


>gi|255645048|gb|ACU23023.1| unknown [Glycine max]
          Length = 325

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 40/241 (16%), Positives = 77/241 (31%), Gaps = 19/241 (7%)

Query: 166 ITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQK 225
           +T      ++  + V+ S    II   L   D+     R         + +   S + Q 
Sbjct: 18  VTAIATPIDNSDMIVTASRDKSIILWHLTKEDKTYGVPRRRLTGHSHFVQDVVLSSDGQF 77

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
               ++D E    + L D     + +R       +L+  FS + ++ + S  +D  + ++
Sbjct: 78  ALSGSWDGE----LRLWDLAAGTSARRFVGHTKDVLSVAFSIDNRQIV-SASRDRTIKLW 132

Query: 286 SVDLQSNATERLTNTLFINIS-----ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
                +    + T       S       +SP + Q    S       + V        + 
Sbjct: 133 ----NTLGECKYTIQDGDAHSDWVSCVRFSPSTLQPTIVS-ASWDRTVKVWNLTNCKLRN 187

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSP 399
                         SP G L A     G+   I +    +G +   L   S + A  +SP
Sbjct: 188 TLAGHNGYVNTVAVSPDGSLCA---SGGKDGVILLWDLAEGKRLYSLDAGSIIHALCFSP 244

Query: 400 S 400
           +
Sbjct: 245 N 245


>gi|239981101|ref|ZP_04703625.1| peptidase S9 prolyl oligopeptidase [Streptomyces albus J1074]
 gi|291452970|ref|ZP_06592360.1| peptidase S9 [Streptomyces albus J1074]
 gi|291355919|gb|EFE82821.1| peptidase S9 [Streptomyces albus J1074]
          Length = 629

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 2/75 (2%)

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           AS SPD ++I + +  E +  L+V      ++ R    ++ +     W+     + +T+ 
Sbjct: 21  ASISPDGTKIAYLAPWENRLNLWVGSVEAPEEARRVTSEDRNLLSYHWTDDPRWLLYTRD 80

Query: 367 SGE--KFAIGVMKKD 379
            G      +  +  D
Sbjct: 81  QGGDENSHLYRVDLD 95



 Score = 43.1 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 50/135 (37%), Gaps = 8/135 (5%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNAT-ERLTNTLFINISASYSPDSSQIVFESDR 322
             S +G +       +  ++++   +++     R+T+     +S  ++ D   +++  D+
Sbjct: 22  SISPDGTKIAYLAPWENRLNLWVGSVEAPEEARRVTSEDRNLLSYHWTDDPRWLLYTRDQ 81

Query: 323 EG--KEQLYVMQSNGSDQKR--ISQDKEASYFD---PVWSPQGDLIAFTKFSGEKFAIGV 375
            G     LY +  +  D     ++    A   D   P   P   + +    +   F +  
Sbjct: 82  GGDENSHLYRVDLDVPDAAAVDLTPFPGARITDLKLPTSRPGKAVFSSNSRNPAVFDLFE 141

Query: 376 MKKDGSQERLLVEDS 390
           +       R+L E++
Sbjct: 142 LDIATGDLRMLAENT 156



 Score = 41.2 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 38/240 (15%), Positives = 84/240 (35%), Gaps = 23/240 (9%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
             SP+  K+AY     E+ L +++         +R+ +    +L+  ++ + +  L +  
Sbjct: 22  SISPDGTKIAYLA-PWENRLNLWVGSVEAPEEARRVTSEDRNLLSYHWTDDPRWLLYTRD 80

Query: 278 KDE--AMDIYSVDLQ--SNATERLTNTLFINIS----ASYSPDSSQIVFESDREGK--EQ 327
           +       +Y VDL     A   LT      I+     +  P   + VF S+        
Sbjct: 81  QGGDENSHLYRVDLDVPDAAAVDLTPFPGARITDLKLPTSRP--GKAVFSSNSRNPAVFD 138

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER--- 384
           L+ +     D + ++++   +     +   G     T    E+  + + + D S +    
Sbjct: 139 LFELDIATGDLRMLAENTAGAAVTLFY--GGSAGPLTSEVSERGDLRLSRWDESTQTSCH 196

Query: 385 -LLVEDSNLQAPTW----SPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
               E  +     +    +P G  ++    +D D    +    + G    + + P Y  D
Sbjct: 197 LAWFEGGDYPLGVYPLEVTPDGSGVLHGSYQDSDRLRVVRLDTVTGEETVVDSHPRYDLD 256


>gi|257067818|ref|YP_003154073.1| YVTN family beta-propeller repeat protein [Brachybacterium faecium
           DSM 4810]
 gi|256558636|gb|ACU84483.1| YVTN family beta-propeller repeat protein [Brachybacterium faecium
           DSM 4810]
          Length = 408

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 68/215 (31%), Gaps = 29/215 (13%)

Query: 219 FSPNQQKVAYATYDDEDILR--VYLMDTRIDRAPKRIGNFRSMILAPRF----------- 265
           FSP+ Q    + Y             D        R   FR  + + ++           
Sbjct: 147 FSPDGQHAYVSQYRLRGPGEGATATDDCANGDQIGRSAVFRLDLASGQWDQVIEVGRVPK 206

Query: 266 ----SSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYS---PDSSQIVF 318
               S++G RAL+S   DE++    +DL++    R    + ++ +   S   PD+     
Sbjct: 207 FLSISADGSRALVSNWCDESVS--VLDLEAGEEIR---EIPVDAAPRGSVILPDNRTAYV 261

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK 378
            +     ++LY +       + ++          V SP    + +   SG    + +   
Sbjct: 262 TA--MYADELYRVDLETGSSELVTDTGRKPRHL-VLSPDASRL-YLTVSGSDRLVELDAA 317

Query: 379 DGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
            G   R        +    SP G +L         
Sbjct: 318 TGEVLRTAETGREPRTMAISPDGLALYIVNYYANT 352



 Score = 40.4 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 31/223 (13%), Positives = 68/223 (30%), Gaps = 31/223 (13%)

Query: 239 VYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALIS-------------------VQKD 279
           V  +D        R G  +   +   FS +G+ A +S                     + 
Sbjct: 121 VDEVDLAQHGFDDRAGVTQGAPVEAVFSPDGQHAYVSQYRLRGPGEGATATDDCANGDQI 180

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
               ++ +DL S   +++     +    S S D S+    S+    E + V+     ++ 
Sbjct: 181 GRSAVFRLDLASGQWDQVIEVGRVPKFLSISADGSR-ALVSNWC-DESVSVLDLEAGEEI 238

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWS 398
           R     +A+    V  P       T    +   +  +  +     L+ +     +    S
Sbjct: 239 REIPV-DAAPRGSVILPDNRTAYVTAMYAD--ELYRVDLETGSSELVTDTGRKPRHLVLS 295

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
           P    L  +             ++L+     ++ T     +P+
Sbjct: 296 PDASRLYLTVSGSDR------LVELDAATGEVLRTAETGREPR 332


>gi|149584813|ref|XP_001508159.1| PREDICTED: similar to WD repeat domain 1 [Ornithorhynchus anatinus]
          Length = 447

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 29/87 (33%), Gaps = 11/87 (12%)

Query: 343 QDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLL-----VEDSNLQAPTW 397
            D         +SP G+  A     G    I V      ++          D  + A +W
Sbjct: 26  FDHSRFVNCVRFSPDGNRFATASADG---QIYVYDGKTGEKVCALGDSKAHDGGIYAISW 82

Query: 398 SPSGRSLIFSRKKDGDTGSKLYSIDLN 424
           SP    L+      GD  +K++ +  N
Sbjct: 83  SPDSSQLL---SASGDKTAKIWDVGAN 106



 Score = 42.3 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 59/167 (35%), Gaps = 30/167 (17%)

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATE-RLTNTLFINIS---ASYSPDSSQIVFE 319
           RFS +G R   +   D    IY  D ++      L ++   +      S+SPDSSQ++  
Sbjct: 36  RFSPDGNRFA-TASADG--QIYVYDGKTGEKVCALGDSKAHDGGIYAISWSPDSSQLLSA 92

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFD----PVWSPQ-------GDLIAFTKFSG 368
           S   G +   +    G++    + +  ++  D     +W             I +   + 
Sbjct: 93  S---GDKTAKIWDV-GANSVVSTFNMGSNVLDQQLGCLWQKDHLLSISLSGYINYLDKNN 148

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTG 415
               + V+K      + L    N         G+S I+S   DG   
Sbjct: 149 PDKPLRVIKGHSKSIQCLTVHKNG--------GKSYIYSGSHDGHIN 187



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 8/77 (10%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPRFSSNGKRALI 274
           RFSP+  + A A+ D     ++Y+ D +       +G+ +     I A  +S +  + L 
Sbjct: 36  RFSPDGNRFATASADG----QIYVYDGKTGEKVCALGDSKAHDGGIYAISWSPDSSQLL- 90

Query: 275 SVQKDEAMDIYSVDLQS 291
           S   D+   I+ V   S
Sbjct: 91  SASGDKTAKIWDVGANS 107


>gi|116334694|ref|YP_796221.1| dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lactobacillus
           brevis ATCC 367]
 gi|116100041|gb|ABJ65190.1| Dipeptidyl aminopeptidase/acylaminoacyl-peptidase [Lactobacillus
           brevis ATCC 367]
          Length = 656

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 42/343 (12%), Positives = 88/343 (25%), Gaps = 69/343 (20%)

Query: 160 DDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           D        +      +++ V   V          +   D    +    +  ++  +P  
Sbjct: 9   DLFRLKSVTQPTVAAGQVVVVENRVDQASNSYLADLKRVDLQGHQQTLATTGKLAVQPVI 68

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRF-SSNGKRALISVQK 278
             +Q    Y   +  D        +     P+++       +     S++G+        
Sbjct: 69  VGDQ---VYYAANVGDAKAQLFRVSLAGGTPEQLTTAAEEAVTTVLASADGQYVYFKTTA 125

Query: 279 --------------------------DEAMDIYS--------VDLQSNATERLTNTLFIN 304
                                     D    +             ++ A   L    F  
Sbjct: 126 TAERPKLPSPQAFPQTRHVDRLINKADGYGWLPLNVTYRLRCYQPETGAVTELFQHGFDF 185

Query: 305 ISASYSPDSSQIVF------ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV-WSPQ 357
              S S     +        ++DR+     Y   +   +   ++    A  F+    SP 
Sbjct: 186 DVTSVSAAGRYVTVLHDVQPDNDRDFTRGAYCYDATTGETVELTTSIAAGRFEDATLSPD 245

Query: 358 GDLIAFTKFSG-----EKFAIGVMKKDGSQERLLVED-SNLQAP---------------T 396
           G  +A     G         + V+ + G+Q + L  D +   AP                
Sbjct: 246 GQRVALVGDDGTFGRHTVANVYVVDRTGNQMQNLTADLAADPAPEMAADFIQQQGSKLVR 305

Query: 397 WSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYASD 439
           W      ++F+        S+LY  +     + + NT     D
Sbjct: 306 WL-DSDRVVFTAVYHAH--SQLYVGNATDGIDRIDNTARQIVD 345


>gi|16944416|emb|CAC28770.2| related to TRANSCRIPTION INITIATION FACTOR TFIID 100 KDA SUBUNIT
           [Neurospora crassa]
          Length = 730

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 29/177 (16%), Positives = 63/177 (35%), Gaps = 10/177 (5%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           +G    ++ V  +D A+   +    D  +    + PN   +  A+ D +  +R  +    
Sbjct: 526 TGGWDKTVRVFAQDRASALRIMVGHDTPISAIAWHPNGTYIFSASDDTDKSIR--MWSVV 583

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLFIN 304
                +        I A + + NGK  L S      +  + +  +    +R   +     
Sbjct: 584 TGNCVRIFTGHTDYISALQCAPNGK-ILASADTGGNIFFWDI-AKGARIKRCRGHGKGGI 641

Query: 305 ISASYSPDSSQIVFESDREGKEQLY----VMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            S S+S +S+ +V     +G  +L+        + S Q  I+   +    +   +P 
Sbjct: 642 PSLSFSAESNVLV-SGGLDGTVRLWDVELPADPSKSSQLAITSSGKKKGKEVQITPD 697



 Score = 43.5 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 28/244 (11%), Positives = 63/244 (25%), Gaps = 50/244 (20%)

Query: 229 ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS-------------SNG------ 269
            + + + +      +  +    +++      +    FS             ++G      
Sbjct: 419 WSMNGKPLRSSVASEKDLQVNNRKLIGHSGPVYGVSFSDSIANLDRNVFPEADGAKPDTS 478

Query: 270 KRALISVQKDEAMDIYSVD---------LQSNATERLTNTLFINISASYSPDSSQIVFES 320
            + L+S   D  + ++S+D                R+           + P         
Sbjct: 479 TKLLVSCSADGQVRLWSLDHWACLCIYKAHDGPVFRV----------LWGPHGHYFA--- 525

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
                + + V   + +   RI    +       W P G  I F+       +I +     
Sbjct: 526 TGGWDKTVRVFAQDRASALRIMVGHDTPISAIAWHPNGTYI-FSASDDTDKSIRMWSVVT 584

Query: 381 SQERLLVEDSNLQAPTW--SPSGRSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYA 437
                +             +P+G+ L        DTG  ++  D+  G            
Sbjct: 585 GNCVRIFTGHTDYISALQCAPNGKILA-----SADTGGNIFFWDIAKGARIKRCRGHGKG 639

Query: 438 SDPQ 441
             P 
Sbjct: 640 GIPS 643


>gi|328542031|ref|YP_004302140.1| Twin-arginine translocation pathway signal [polymorphum gilvum
           SL003B-26A1]
 gi|326411781|gb|ADZ68844.1| Twin-arginine translocation pathway signal [Polymorphum gilvum
           SL003B-26A1]
          Length = 385

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 10/138 (7%)

Query: 302 FINISASYSPDSSQIVFESDR---EGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              +      D  + +F S R   +G+  + VM ++G D   +             SP  
Sbjct: 35  AYAVELLIGADPEEPLFASARRNADGRHAVAVMTADGRDLIEVPLPGRG--HGIAVSPDR 92

Query: 359 DLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAP---TWSPSGRSLIFSRKKDGDT 414
             +         FA+ +  +DG S  +++   +         +SP GR ++         
Sbjct: 93  RRLMAFARRPGTFAV-LFDRDGRSAPQVIASPAGRHFYGHGAFSPDGRLVLAVENDFEAA 151

Query: 415 GSKLYSIDLNGRNETLIN 432
              +   D++G     + 
Sbjct: 152 RGVVGLYDVSGPAVRRLG 169



 Score = 43.1 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 17/123 (13%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
           +G+ A+  +  D   D+  V L             I +    SPD  +++  + R G   
Sbjct: 59  DGRHAVAVMTADGR-DLIEVPLPGR-------GHGIAV----SPDRRRLMAFARRPGTFA 106

Query: 328 LYVMQSNGSDQKRI--SQDKEASYFDPVWSPQGDLIAFTK--FSGEKFAIGVMKKDGSQE 383
           + +   +G    ++  S      Y    +SP G L+   +  F   +  +G+    G   
Sbjct: 107 V-LFDRDGRSAPQVIASPAGRHFYGHGAFSPDGRLVLAVENDFEAARGVVGLYDVSGPAV 165

Query: 384 RLL 386
           R L
Sbjct: 166 RRL 168


>gi|313237371|emb|CBY12562.1| unnamed protein product [Oikopleura dioica]
          Length = 724

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 72/201 (35%), Gaps = 22/201 (10%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE---------RLTNTLFINISASYS 310
                FS  GK       +  A+ +Y+    ++ ++         R  +    N+   +S
Sbjct: 215 NRGVDFSPTGKFVATYHDQGIALWVYTPQFAASQSKARGIWSRSHRFKHDQVDNMQ--FS 272

Query: 311 PDSSQIVFESDREGKEQ--LYVMQSNGSDQKR---ISQDKEASYFDPV--WSPQGDLIAF 363
           PD   IV  +   G     + +     S +KR   +   +      P   WS       F
Sbjct: 273 PDERYIVTGNGARGDAHSTVIIYDVWSSQEKRKFTVQTGETGHMEWPHLKWSADSRY--F 330

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            + + +  ++  +   G  ++  V+   ++  +WSP    + +   + G+  +++  I +
Sbjct: 331 ARQTEDTISVYELPACGLLDKRSVKCPGVRGFSWSPKDNYIAYWVPEQGEAPARVTIISV 390

Query: 424 NGRNETLINT--PAYASDPQW 442
             R+E  +      +  +  W
Sbjct: 391 PRRHEIRVKNLYNVHNIEMAW 411



 Score = 42.3 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 48/299 (16%), Positives = 94/299 (31%), Gaps = 44/299 (14%)

Query: 167 TGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPS---------RDQILFEP 217
           T    DF+    FV+     GI    L V     A  +               DQ+    
Sbjct: 214 TNRGVDFSPTGKFVATYHDQGIA---LWVYTPQFAASQSKARGIWSRSHRFKHDQVDNM- 269

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI----GNFRSMILAPR--FSSNGKR 271
           +FSP+++ +        D     ++        KR           +  P   +S++ + 
Sbjct: 270 QFSPDERYIVTGNGARGDAHSTVIIYDVWSSQEKRKFTVQTGETGHMEWPHLKWSADSR- 328

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREG--KEQLY 329
              + Q ++ + +Y +       +R      +    S+SP  + I +    +G    ++ 
Sbjct: 329 -YFARQTEDTISVYELPACGLLDKRSVKCPGV-RGFSWSPKDNYIAYWVPEQGEAPARVT 386

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG---------EKFAIGVMK--- 377
           ++      + R+         +  W  QG  +A                 F I  MK   
Sbjct: 387 IISVPRRHEIRVKNLYNVHNIEMAWQDQGAYLAVRVDRPVKGKRSSHVSSFEIFHMKEKE 446

Query: 378 --KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTP 434
              D  + + +V         W P G  L     + G     +Y++ + G+   L+  P
Sbjct: 447 VPVDTVEVKDMVTRF-----MWEPKGNKLCTLHGEPGRVNCTIYNV-VQGKVTALVTIP 499


>gi|297849974|ref|XP_002892868.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338710|gb|EFH69127.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 895

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 64/196 (32%), Gaps = 9/196 (4%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            +SP+ Q +A    D++    V +                + + A  F ++    L S  
Sbjct: 391 TYSPDSQFLATGADDNK----VKVWSVMSGSCFITFTEHTNAVTALHFMADNHSLL-SAS 445

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
            D  +  +      N     T T    +S +  P     V  +      +++V       
Sbjct: 446 LDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGD--VVCAGTLDSFEIFVWSKKTGQ 503

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
            K I    EA     ++SP   ++A + +        V    G+ E     + ++    +
Sbjct: 504 IKDILSGHEAPVHGLMFSPLTQILASSSWDNTVRLWDVFASKGTVET-FQHNHDVLTVAF 562

Query: 398 SPSGRSLIFSRKKDGD 413
            P G+ L  S   DG 
Sbjct: 563 RPDGKQLA-SSTLDGQ 577


>gi|297193071|ref|ZP_06910469.1| peptidase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297151627|gb|EDY63705.2| peptidase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 417

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 9/148 (6%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAP------KRIGNFRSMILAPRFSSNG--KR 271
           S +   +A    +  D +   L  TR+D +        R G     +    F+  G   R
Sbjct: 5   SHDGSLLAIEHTEHGDAMHSALRVTRLDGSTVAELDDTRGGTVELGLEVLGFAPVGGDTR 64

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
            L+  Q+    +    D+ S     L   L  +++A + PD S ++     E + +L+  
Sbjct: 65  LLVGHQRRGRWEPMIWDVASGEETELGIELPGDVNAEWYPDGSALLIAHSFEARGELWRY 124

Query: 332 QSNGSDQKRISQDKEASYFDPVWSPQGD 359
                   +I +    S       P G 
Sbjct: 125 DLATRALTQI-ETPAGSVSGATARPDGT 151



 Score = 38.5 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 49/142 (34%), Gaps = 12/142 (8%)

Query: 310 SPDSSQIVFESDREG---KEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQG--DL 360
           S D S +  E    G      L V + +GS    +   +  +    +    ++P G    
Sbjct: 5   SHDGSLLAIEHTEHGDAMHSALRVTRLDGSTVAELDDTRGGTVELGLEVLGFAPVGGDTR 64

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLL-VEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLY 419
           +        ++   +      +E  L +E        W P G +L+ +     +   +L+
Sbjct: 65  LLVGHQRRGRWEPMIWDVASGEETELGIELPGDVNAEWYPDGSALLIA--HSFEARGELW 122

Query: 420 SIDLNGRNETLINTPAYASDPQ 441
             DL  R  T I TPA +    
Sbjct: 123 RYDLATRALTQIETPAGSVSGA 144


>gi|291441203|ref|ZP_06580593.1| lipoprotein [Streptomyces ghanaensis ATCC 14672]
 gi|291344098|gb|EFE71054.1| lipoprotein [Streptomyces ghanaensis ATCC 14672]
          Length = 339

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 50/147 (34%), Gaps = 17/147 (11%)

Query: 306 SASYSPDSSQIVF-ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFT 364
              +  D   +V   +   GK ++  +   G   +++  D   +Y    +SP    +  +
Sbjct: 65  GPVFGEDGRLVVVDVTAPAGKPKVMSVDVRGKTARKVFTDSRGAYTSAQFSPYDGRLYLS 124

Query: 365 KFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRK-----------KDGD 413
            F+     I  +  DGS  R       +      P    + F R             +G+
Sbjct: 125 DFAHG--EIVSLAPDGSD-RRTFFTGEVDGARMRPD--DVAFDRDGNLYVSDSLGLSEGE 179

Query: 414 TGSKLYSIDLNGRNETLINTPAYASDP 440
              ++  ID +GR  T++     A + 
Sbjct: 180 ARGRVVRIDRDGRKATVLADGLAAPNG 206



 Score = 37.3 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 50/142 (35%), Gaps = 19/142 (13%)

Query: 213 ILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS-NGKR 271
           +L  P F  + + V           +V  +D R   A K   + R    + +FS  +G+ 
Sbjct: 62  LLEGPVFGEDGRLVVVDVTAPAGKPKVMSVDVRGKTARKVFTDSRGAYTSAQFSPYDGR- 120

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVM 331
               +   +      V L  + ++R T        A   PD   + F  DR+G   LYV 
Sbjct: 121 ----LYLSDFAHGEIVSLAPDGSDRRTFFTGEVDGARMRPDD--VAF--DRDGN--LYVS 170

Query: 332 QSNG-------SDQKRISQDKE 346
            S G           RI +D  
Sbjct: 171 DSLGLSEGEARGRVVRIDRDGR 192


>gi|270013922|gb|EFA10370.1| hypothetical protein TcasGA2_TC012601 [Tribolium castaneum]
          Length = 748

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 9/138 (6%)

Query: 220 SPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           SP+ + +A        +   + L DT   +  +++ +    ++   FS + +  L SV +
Sbjct: 514 SPDGRFLASACKATTPEHAAILLWDTSNWKQIQKLVSHTLTVVQLSFSPDSQHLL-SVSR 572

Query: 279 DEAMDIYSVDLQSNATERLTNTL--FINIS----ASYSPDSSQIVFESDREGKEQLYVMQ 332
           D    ++S +  +      T      I+        ++ DS        R+GK  ++   
Sbjct: 573 DRRWSLFSKNPNATFELVATTDKRTSIHTRIIWCCGWTHDSRYFA-TGSRDGKVAVWTKN 631

Query: 333 SNGSDQKRISQDKEASYF 350
           +N  +   + Q + AS  
Sbjct: 632 ANKQETGVLGQYEAASVH 649



 Score = 41.5 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 100/302 (33%), Gaps = 35/302 (11%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-IL 214
           H    +I   I   +G     ++ V+ ++ + +      +   D   IR +       + 
Sbjct: 96  HESIVNIVDGICKNEG-----VVVVTVAMDAVVKIWFRAIESDDFTLIRDIKGGHSICVG 150

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               F P ++ +  A   D   + +Y+ +          G     +    F+++GK  L+
Sbjct: 151 VRIAFFPQKESLILACAMDNSAIDLYVEENEFAHCHTLKG-HEDWVRGLDFTTDGKDLLL 209

Query: 275 -SVQKDEAMDIYSVDLQSNATER------------------LTNTLFINISASYSPDSSQ 315
            S  +D  + ++    QS  +E                   LT       S  +SP S Q
Sbjct: 210 ASASQDCYIRLWRFAPQSEISEPHNVIKLKNALYKVSLDTILTGHEGWIYSVHWSPKSPQ 269

Query: 316 IVFESDREGKEQLYVMQSNG---SDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFSGEK 370
           ++  S  +    ++   S+    +++ R+ +    +  ++  V+SP G  I         
Sbjct: 270 LL-SSSLDKSMIIWEFDSSTNLWTEKVRVGEVGGNTLGFYGGVFSPDGHNIL-AHGYNGA 327

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           F +      G +  + +     +     W P G  L+             +S D +    
Sbjct: 328 FHLWENASSGWKPCVTIGGHFAEVTDLAWDPQGEFLLTVSADQTTRIHAPWSDDKDATWH 387

Query: 429 TL 430
            +
Sbjct: 388 EI 389


>gi|269973832|emb|CBE66802.1| CG3004-PA [Drosophila ananassae]
          Length = 317

 Score = 44.2 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 58/151 (38%), Gaps = 11/151 (7%)

Query: 187 GIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRI 246
           G    S+ + D        + P  D  + +   SP+ + +A    +++    ++ + +  
Sbjct: 139 GSQNGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA--AANNKGNCYIWSLTSSP 196

Query: 247 D------RAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNT 300
           D      R  K+I      IL  +FS +  R L++   D    I+  +        L   
Sbjct: 197 DQKMSTLRPTKKIPAHSRYILRCKFSPD-SRLLLTTSGDGTACIWKTE-DFTKWRELCIE 254

Query: 301 LFINISASYSPDSSQIVFESDREGKEQLYVM 331
                 A++S DS  + F +  +G  +L+ +
Sbjct: 255 NCWVWDAAFSSDSKWL-FTASSDGVARLWKL 284



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 48/132 (36%), Gaps = 16/132 (12%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV-------MK 377
              +++        +RI  + +AS  D   SP G  +A     G  +   +       M 
Sbjct: 142 NGSVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLAAANNKGNCYIWSLTSSPDQKMS 201

Query: 378 KDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETL------I 431
                +++      +    +SP  R L+ +    GD  + ++  +   +   L      +
Sbjct: 202 TLRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIWKTEDFTKWRELCIENCWV 258

Query: 432 NTPAYASDPQWV 443
              A++SD +W+
Sbjct: 259 WDAAFSSDSKWL 270



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 49/144 (34%), Gaps = 12/144 (8%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQS------ 291
            V+L D + ++  + +    + I     S +G+    +        I+S+          
Sbjct: 144 SVFLWDVKSEKHERIVPEVDASIQDVAISPDGRYLA-AANNKGNCYIWSLTSSPDQKMST 202

Query: 292 -NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
              T+++       +   +SPDS  ++  S   G     + ++    + R    +    +
Sbjct: 203 LRPTKKIPAHSRYILRCKFSPDSRLLLTTS---GDGTACIWKTEDFTKWRELCIENCWVW 259

Query: 351 DPVWSPQGDLIAFTKFSGEKFAIG 374
           D  +S     + FT  S     + 
Sbjct: 260 DAAFSSDSKWL-FTASSDGVARLW 282


>gi|313247082|emb|CBY35912.1| unnamed protein product [Oikopleura dioica]
          Length = 441

 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 31/199 (15%), Positives = 73/199 (36%), Gaps = 20/199 (10%)

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATE---------RLTNTLFINISASYS 310
                FS  GK       +  A+ +Y+    ++ ++         R  +    N+   +S
Sbjct: 215 NRGVDFSPTGKFVATYHDQGIALWVYTPQFAASQSKARGIWSRSHRFKHDQVDNMQ--FS 272

Query: 311 PDSSQIVFESDREGKEQ--LYVMQSNGSDQKR---ISQDKEASYFDPV--WSPQGDLIAF 363
           PD   IV  +   G     + +     S +KR   +   +      P   WS       F
Sbjct: 273 PDERYIVTGNGARGDAHSTVIIYDVWSSQEKRKFTVQTGETGHMEWPHLKWSADSRY--F 330

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
            + + +  ++  +   G  ++  V+   ++  +WSP    + +   + G+  +++  I +
Sbjct: 331 ARQTEDTISVYELPACGLLDKRSVKCPGVRGFSWSPKDNYIAYWVPEQGEAPARVTIISV 390

Query: 424 NGRNETLINTPAYASDPQW 442
             R+E  +     ++  +W
Sbjct: 391 PRRHEIRVKNFTMSTTSKW 409


>gi|156374281|ref|XP_001629736.1| predicted protein [Nematostella vectensis]
 gi|156216743|gb|EDO37673.1| predicted protein [Nematostella vectensis]
          Length = 1001

 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 36/238 (15%), Positives = 71/238 (29%), Gaps = 44/238 (18%)

Query: 206 LTPSRDQILFEPRFSPNQQKVAYATYDDE-DILRVYLM-------DTRIDRAPKRIGNFR 257
                 + +F     P+  + A     DE   + ++ M       D   +  PK +    
Sbjct: 8   WVSHDGKPIFSIDIHPDGSRFAVGGQGDECGKVSIWNMAPIKNEEDEMNENVPKLLCQMD 67

Query: 258 SM---ILAPRFSSNGKRALISVQKDEAMDIYSV-----------DLQSNAT--------E 295
           +    +   R+S NGK    S   D  + I+ +                           
Sbjct: 68  NHLACVNCVRWSGNGKYLA-SGGDDNLIMIWQMARYLGAMPTFESGGGGKLNIEQWRCVH 126

Query: 296 RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQS-NGSDQKRISQDKEASYFDPVW 354
            L       +  ++SPD S +   S       + +  +    +  +I +          W
Sbjct: 127 TLRQHSGDVLDLAWSPDDSFLASGSV---DNTVTIWNAQKFPEVIQIIKGHTGLVKGVTW 183

Query: 355 SPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP-------TWSPSGRSLI 405
            P G  +A ++   +   +     D  QE  + E     +        +WSP G  ++
Sbjct: 184 DPVGKYLA-SQSDDKTLRVWR-TTDWQQETSVTEPFLECSGTTHVLRLSWSPDGHYVV 239



 Score = 40.8 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/186 (11%), Positives = 61/186 (32%), Gaps = 27/186 (14%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLM------------------DTRIDRAPKRIGNFRSM 259
           R+S N + +A  +  D++++ ++ M                  +    R    +      
Sbjct: 77  RWSGNGKYLA--SGGDDNLIMIWQMARYLGAMPTFESGGGGKLNIEQWRCVHTLRQHSGD 134

Query: 260 ILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
           +L   +S +      S   D  + I++        + +     +    ++ P    +  +
Sbjct: 135 VLDLAWSPDDSFLA-SGSVDNTVTIWNAQKFPEVIQIIKGHTGLVKGVTWDPVGKYLASQ 193

Query: 320 SD----REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG- 374
           SD    R  +   +  +++ ++   +            WSP G  +           +  
Sbjct: 194 SDDKTLRVWRTTDWQQETSVTEPF-LECSGTTHVLRLSWSPDGHYVVSAHAMNNSGPVAK 252

Query: 375 VMKKDG 380
           ++++DG
Sbjct: 253 ILERDG 258



 Score = 38.1 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/143 (13%), Positives = 45/143 (31%), Gaps = 20/143 (13%)

Query: 182 ESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           ES   G +               +        + +  +SP+   +A  + D  + + ++ 
Sbjct: 110 ESGGGGKLNIEQW-------RCVHTLRQHSGDVLDLAWSPDDSFLASGSVD--NTVTIWN 160

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
              +     + I     ++    +   GK    S   D+ + ++           +T   
Sbjct: 161 AQ-KFPEVIQIIKGHTGLVKGVTWDPVGKYLA-SQSDDKTLRVWRT-TDWQQETSVT-EP 216

Query: 302 FINISA-------SYSPDSSQIV 317
           F+  S        S+SPD   +V
Sbjct: 217 FLECSGTTHVLRLSWSPDGHYVV 239


>gi|157136853|ref|XP_001656940.1| wd-repeat protein [Aedes aegypti]
 gi|108880969|gb|EAT45194.1| wd-repeat protein [Aedes aegypti]
          Length = 513

 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 17/177 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +   ++ P  Q +A  + D      + +   + D     +      I   ++S
Sbjct: 343 FQGHTNEVNAIKWDPQGQLLASCSDDM----TLKIWSMKQDTCVHDLQAHSKEIYTIKWS 398

Query: 267 SNGKR--------ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             G           L S   D  + ++ V+ +      LT       S ++SPD   +  
Sbjct: 399 PTGTGTNNPNMNLILASASFDSTVRLWDVE-RGQCIHTLTKHTEPVYSVAFSPDGKFLAS 457

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            S     ++   + S  S Q   S       F+  W+ +G  +  +   G  F + +
Sbjct: 458 GSF----DKCVHIWSTQSGQLVHSYKGTGGIFEVCWNSRGSKVGASASDGSVFVLDL 510


>gi|198428917|ref|XP_002119597.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 762

 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 63/163 (38%), Gaps = 19/163 (11%)

Query: 244 TRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTNTLF 302
           +   R  K +   +  +L+ ++S +G  AL++  +D  + I+S   +S      L     
Sbjct: 92  SNAGRIEKSVEAHKGAVLSGKWSKDGS-ALLTAGEDGQIKIWS---RSGMLRSTLAQLPC 147

Query: 303 INISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIA 362
              S  +SP+S  +++ +     +QL +     S +    +  +       W+   +LI 
Sbjct: 148 CIYSVVWSPESDNVLYTN----GKQLVIKPLQPSAKPLTWKAHDGIVLKVDWNSVNNLIL 203

Query: 363 FTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAP----TWSPSG 401
            +     K+ I       S  R L   +    P    +WSP G
Sbjct: 204 -SGGEDCKYKIW-----DSYGRPLYSSAIHDYPITSVSWSPDG 240



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 34/259 (13%), Positives = 82/259 (31%), Gaps = 34/259 (13%)

Query: 161 DIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDR-DG--------ANIRYLTPSRD 211
           + +   T     F + +  +     +G   + + V+   DG          I     +  
Sbjct: 46  ESFPLSTLPADVFPTDMSILPSQSKAGKNSSDVFVITSSDGKFHLFSNAGRIEKSVEAHK 105

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR 271
             +   ++S +    A  T  ++  ++++   +R       +      I +  +S     
Sbjct: 106 GAVLSGKWSKDGS--ALLTAGEDGQIKIW---SRSGMLRSTLAQLPCCIYSVVWSPESDN 160

Query: 272 ALISVQKDEAMDIYSVDLQSNATERLT--NTLFINISASYSPDSSQIVFESDREGKEQLY 329
            L +        +    LQ  + + LT      I +   ++  ++ I+      G++  Y
Sbjct: 161 VLYT----NGKQLVIKPLQ-PSAKPLTWKAHDGIVLKVDWNSVNNLIL----SGGEDCKY 211

Query: 330 VMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG---SQERLL 386
            +  +       S   +       WSP G+L     F+     + +  + G     E+  
Sbjct: 212 KIWDSYGRPLYSSAIHDYPITSVSWSPDGNLFTVGSFN----MLRLCDRSGWSHGLEKPT 267

Query: 387 VEDSNLQAPTWSPSGRSLI 405
               ++    WS  G  + 
Sbjct: 268 T--GSVFNVAWSMDGTQVA 284


>gi|114603470|ref|XP_518112.2| PREDICTED: THO complex 3 isoform 4 [Pan troglodytes]
          Length = 332

 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 82/242 (33%), Gaps = 15/242 (6%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           SV SG  +  L + +   G +      +    +    +S + +++A  ++D      V+L
Sbjct: 26  SVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSFD--KTASVFL 83

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++                +    +  +     ++   D+ + I+  D+++       NT 
Sbjct: 84  LEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIW--DVRTTKCIATVNTK 141

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
             NI+  +SPD   I       G +   V   +    +  ++++     +   W+   ++
Sbjct: 142 GENINICWSPDGQTIAV-----GNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNM 196

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             F         I    +    + +    SN     + P G+   +      D    L+ 
Sbjct: 197 F-FLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGK---YFATGSADALVSLWD 252

Query: 421 ID 422
           +D
Sbjct: 253 VD 254



 Score = 41.9 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 74/214 (34%), Gaps = 23/214 (10%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R    S DQ+ + P  +P+     + T   +  +R++  D R  +    + N +   +
Sbjct: 94  NYRGHGDSVDQLCWHPS-NPD----LFVTASGDKTIRIW--DVRTTKCIATV-NTKGENI 145

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +G+   +  + D    I +   +S A E+     F     S++ D++       
Sbjct: 146 NICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ---FKFEVNEISWNNDNNMFFLT-- 200

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G   + ++        +      ++     + P G   A          + +   D  
Sbjct: 201 -NGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADA---LVSLWDVD-- 254

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKD 411
           +   +   S L  P    ++S  G+ L  + +  
Sbjct: 255 ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDH 288



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 46/161 (28%), Gaps = 25/161 (15%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDT--RIDRAPKRIGNFRSMILAPRFSSNGKRAL---- 273
           S       + +        V  M    R     +      + + +  +S +G+R      
Sbjct: 16  SGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSF 75

Query: 274 ------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                   ++KD  +   +     ++ ++L             PD    +F     G + 
Sbjct: 76  DKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSN-------PD----LFV-TASGDKT 123

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + +     +     + + +    +  WSP G  IA      
Sbjct: 124 IRIWDVRTTKCIA-TVNTKGENINICWSPDGQTIAVGNKDD 163


>gi|110741665|dbj|BAE98779.1| WD-repeat protein-like [Arabidopsis thaliana]
          Length = 458

 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 36/240 (15%), Positives = 81/240 (33%), Gaps = 31/240 (12%)

Query: 143 KFFSSPASWRKIA-HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLC----VMD 197
           ++ +    +R +   T S  + Q  +        +I ++  ++ S  I   L     +  
Sbjct: 20  RYVAVANDYRLVIRDTFSFQVVQLFS-----CLDKISYIEWALDSEYILCGLYKKPMIQA 74

Query: 198 RDGANIRYLTPSRDQI--LFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGN 255
                  +     +    +   R+SP+ + +   +   E  LR+ +              
Sbjct: 75  WSLTQPEWTCEIDEGPAGISYARWSPDSRHILTTS---EFQLRLTVWSLLNTACVHVQWP 131

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI----SASYSP 311
                    F+ +GK A I  ++D    +  +  QS     +  +  ++        +SP
Sbjct: 132 KHGSK-GVSFNQDGKFAAICTRRDCKDYVNLLSCQS---WEIMGSFAVDTLDLADLEWSP 187

Query: 312 DSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPV----WSPQGDLIAFTKFS 367
           D S IV   D   + ++ +   +G   + + + +       V    WSP G  +A   + 
Sbjct: 188 DDSSIV-VWDSPLEYKVLIYSPDG---RCLFKYQAYECGLGVKTVSWSPCGQFLAIGSYD 243



 Score = 43.9 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 62/197 (31%), Gaps = 11/197 (5%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           ++ + +   Y          +             I    + I   R+S + +  L + + 
Sbjct: 55  WALDSE---YILCGLYKKPMIQAWSLTQPEWTCEIDEGPAGISYARWSPDSRHILTTSEF 111

Query: 279 DEAMDIYSVDLQSNATE-RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSD 337
              + ++S+ L +     +        +S  ++ D       + R+ K+ + ++     +
Sbjct: 112 QLRLTVWSL-LNTACVHVQWPKHGSKGVS--FNQDGKFAAICTRRDCKDYVNLLSCQSWE 168

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS---QERLLVEDSNLQA 394
                        D  WSP    I     S  ++ + +   DG    + +       ++ 
Sbjct: 169 IMGSFAVDTLDLADLEWSPDDSSIV-VWDSPLEYKVLIYSPDGRCLFKYQAYECGLGVKT 227

Query: 395 PTWSPSGRSLIFSRKKD 411
            +WSP G+ L       
Sbjct: 228 VSWSPCGQFLAIGSYDQ 244


>gi|109079821|ref|XP_001083412.1| PREDICTED: THO complex subunit 3 isoform 2 [Macaca mulatta]
          Length = 351

 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 82/242 (33%), Gaps = 15/242 (6%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           SV SG  +  L + +   G +      +    +    +S + +++A  ++D      V+L
Sbjct: 26  SVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSFD--KTASVFL 83

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++                +    +  +     ++   D+ + I+  D+++       NT 
Sbjct: 84  LEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIW--DVRTTKCIATVNTK 141

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
             NI+  +SPD   I       G +   V   +    +  ++++     +   W+   ++
Sbjct: 142 GENINICWSPDGQTIAV-----GNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNM 196

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             F         I    +    + +    SN     + P G+   +      D    L+ 
Sbjct: 197 F-FLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGK---YFATGSADALVSLWD 252

Query: 421 ID 422
           +D
Sbjct: 253 VD 254



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 29/230 (12%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R    S DQ+ + P  +P+     + T   +  +R++  D R  +    + N +   +
Sbjct: 94  NYRGHGDSVDQLCWHPS-NPD----LFVTASGDKTIRIW--DVRTTKCIATV-NTKGENI 145

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +G+   +  + D    I +   +S A E+     F     S++ D++       
Sbjct: 146 NICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ---FKFEVNEISWNNDNNMFFLT-- 200

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G   + ++        +      ++     + P G   A          + +   D  
Sbjct: 201 -NGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADA---LVSLWDVD-- 254

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDG------DTGSKLYSI 421
           +   +   S L  P    ++S  G+ L  + +         +TG KL+ +
Sbjct: 255 ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEV 304



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 46/161 (28%), Gaps = 25/161 (15%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDT--RIDRAPKRIGNFRSMILAPRFSSNGKRAL---- 273
           S       + +        V  M    R     +      + + +  +S +G+R      
Sbjct: 16  SGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSF 75

Query: 274 ------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                   ++KD  +   +     ++ ++L             PD    +F     G + 
Sbjct: 76  DKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSN-------PD----LFV-TASGDKT 123

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + +     +     + + +    +  WSP G  IA      
Sbjct: 124 IRIWDVRTTKCIA-TVNTKGENINICWSPDGQTIAVGNKDD 163


>gi|91090664|ref|XP_974342.1| PREDICTED: similar to GA11261-PA [Tribolium castaneum]
          Length = 762

 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 9/138 (6%)

Query: 220 SPNQQKVAY-ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           SP+ + +A        +   + L DT   +  +++ +    ++   FS + +  L SV +
Sbjct: 514 SPDGRFLASACKATTPEHAAILLWDTSNWKQIQKLVSHTLTVVQLSFSPDSQHLL-SVSR 572

Query: 279 DEAMDIYSVDLQSNATERLTNTL--FINIS----ASYSPDSSQIVFESDREGKEQLYVMQ 332
           D    ++S +  +      T      I+        ++ DS        R+GK  ++   
Sbjct: 573 DRRWSLFSKNPNATFELVATTDKRTSIHTRIIWCCGWTHDSRYFA-TGSRDGKVAVWTKN 631

Query: 333 SNGSDQKRISQDKEASYF 350
           +N  +   + Q + AS  
Sbjct: 632 ANKQETGVLGQYEAASVH 649



 Score = 41.2 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 46/302 (15%), Positives = 100/302 (33%), Gaps = 35/302 (11%)

Query: 156 HTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQ-IL 214
           H    +I   I   +G     ++ V+ ++ + +      +   D   IR +       + 
Sbjct: 96  HESIVNIVDGICKNEG-----VVVVTVAMDAVVKIWFRAIESDDFTLIRDIKGGHSICVG 150

Query: 215 FEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALI 274
               F P ++ +  A   D   + +Y+ +          G     +    F+++GK  L+
Sbjct: 151 VRIAFFPQKESLILACAMDNSAIDLYVEENEFAHCHTLKG-HEDWVRGLDFTTDGKDLLL 209

Query: 275 -SVQKDEAMDIYSVDLQSNATER------------------LTNTLFINISASYSPDSSQ 315
            S  +D  + ++    QS  +E                   LT       S  +SP S Q
Sbjct: 210 ASASQDCYIRLWRFAPQSEISEPHNVIKLKNALYKVSLDTILTGHEGWIYSVHWSPKSPQ 269

Query: 316 IVFESDREGKEQLYVMQSNG---SDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFSGEK 370
           ++  S  +    ++   S+    +++ R+ +    +  ++  V+SP G  I         
Sbjct: 270 LL-SSSLDKSMIIWEFDSSTNLWTEKVRVGEVGGNTLGFYGGVFSPDGHNIL-AHGYNGA 327

Query: 371 FAIGVMKKDGSQERLLVEDSNLQAP--TWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNE 428
           F +      G +  + +     +     W P G  L+             +S D +    
Sbjct: 328 FHLWENASSGWKPCVTIGGHFAEVTDLAWDPQGEFLLTVSADQTTRIHAPWSDDKDATWH 387

Query: 429 TL 430
            +
Sbjct: 388 EI 389


>gi|91217237|ref|ZP_01254198.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
 gi|91184580|gb|EAS70962.1| OmpA family protein [Psychroflexus torquis ATCC 700755]
          Length = 616

 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 38/210 (18%), Positives = 66/210 (31%), Gaps = 52/210 (24%)

Query: 285 YSVDLQSNATE----RLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS---- 336
           Y +DLQS        +L+ +   +   +Y  D  ++ F S R    + Y   +  S    
Sbjct: 119 YLMDLQSMTPRFELNKLSLSSDFSDFGAYEFDG-KLYFVSARNESRKKYGWDNEPSLDIF 177

Query: 337 ----------DQKRISQ--DKEASYFDPVWSPQGDLIAFTKFSG------------EKFA 372
                     +   I+   + +        +     + FT+                   
Sbjct: 178 VAENVAGTFKNPIEITGYINTKYHEGSIAITKDKSTLYFTRNDFLYEKYRKDDNGVNNLK 237

Query: 373 IGVMKKDGSQERLLVE------DSNLQAPTWSPSGRSLIFSRKKDGDTG-SKLYSIDLN- 424
           I          + + +        +   P  SP G  L FS  + G  G S LY +D+N 
Sbjct: 238 IYKATLVNGMFQDIQDLPFNDISFSNSNPALSPDGSQLYFSSDRAGGYGSSDLYVVDINA 297

Query: 425 ----GRNETL---INTPAYASDPQWVGFMD 447
               G  + L   +NT    + P    F+D
Sbjct: 298 DGTYGSPQNLGPTLNTEGRENFP----FVD 323



 Score = 39.2 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/118 (14%), Positives = 40/118 (33%), Gaps = 19/118 (16%)

Query: 259 MILAPRFSSNGKRALISVQK---DEAMDIYSVDLQ----SNATERLTNTLFINISAS--- 308
               P  S +G +   S  +     + D+Y VD+       + + L     +N       
Sbjct: 262 SNSNPALSPDGSQLYFSSDRAGGYGSSDLYVVDINADGTYGSPQNL--GPTLNTEGRENF 319

Query: 309 -YSPDSSQIVFESDRE---GKEQLYVMQSNGSD---QKRISQDKEASYFDPVWSPQGD 359
            +  +   + F SD     G   ++  + +  D    + +     ++  D  ++  G+
Sbjct: 320 PFVDEEDMLYFSSDGHLGLGGLDVFYSKVDSGDFTPPQNLGHPLNSNADDFAFTYNGN 377


>gi|14150171|ref|NP_115737.1| THO complex subunit 3 [Homo sapiens]
 gi|114603472|ref|XP_001157149.1| PREDICTED: THO complex subunit 3 isoform 3 [Pan troglodytes]
 gi|48474597|sp|Q96J01|THOC3_HUMAN RecName: Full=THO complex subunit 3; Short=Tho3; AltName: Full=TEX1
           homolog; AltName: Full=hTREX45
 gi|13905124|gb|AAH06849.1| THO complex 3 [Homo sapiens]
 gi|46329672|gb|AAH68499.1| THO complex 3 [Homo sapiens]
 gi|60654869|gb|AAX31999.1| THO complex 3 [synthetic construct]
          Length = 351

 Score = 44.2 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 82/242 (33%), Gaps = 15/242 (6%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           SV SG  +  L + +   G +      +    +    +S + +++A  ++D      V+L
Sbjct: 26  SVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSFD--KTASVFL 83

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++                +    +  +     ++   D+ + I+  D+++       NT 
Sbjct: 84  LEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIW--DVRTTKCIATVNTK 141

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
             NI+  +SPD   I       G +   V   +    +  ++++     +   W+   ++
Sbjct: 142 GENINICWSPDGQTIAV-----GNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNM 196

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             F         I    +    + +    SN     + P G+   +      D    L+ 
Sbjct: 197 F-FLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGK---YFATGSADALVSLWD 252

Query: 421 ID 422
           +D
Sbjct: 253 VD 254



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 29/230 (12%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R    S DQ+ + P  +P+     + T   +  +R++  D R  +    + N +   +
Sbjct: 94  NYRGHGDSVDQLCWHPS-NPD----LFVTASGDKTIRIW--DVRTTKCIATV-NTKGENI 145

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +G+   +  + D    I +   +S A E+     F     S++ D++       
Sbjct: 146 NICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ---FKFEVNEISWNNDNNMFFLT-- 200

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G   + ++        +      ++     + P G   A          + +   D  
Sbjct: 201 -NGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADA---LVSLWDVD-- 254

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDG------DTGSKLYSI 421
           +   +   S L  P    ++S  G+ L  + +         +TG KL+ +
Sbjct: 255 ELVCVRCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGDKLWEV 304



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/161 (12%), Positives = 46/161 (28%), Gaps = 25/161 (15%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDT--RIDRAPKRIGNFRSMILAPRFSSNGKRAL---- 273
           S       + +        V  M    R     +      + + +  +S +G+R      
Sbjct: 16  SGPGSMAPWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSF 75

Query: 274 ------ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ 327
                   ++KD  +   +     ++ ++L             PD    +F     G + 
Sbjct: 76  DKTASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSN-------PD----LFV-TASGDKT 123

Query: 328 LYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           + +     +     + + +    +  WSP G  IA      
Sbjct: 124 IRIWDVRTTKCIA-TVNTKGENINICWSPDGQTIAVGNKDD 163


>gi|326477453|gb|EGE01463.1| WD repeat protein [Trichophyton equinum CBS 127.97]
          Length = 456

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 8/100 (8%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+   +A A++D+     V L + R  +    +      +    FS++  R L+S  
Sbjct: 350 TFSPDGVYIASASFDN----HVKLWNARDGKFIFSLRGHVGPVYQCCFSAD-SRLLVSSS 404

Query: 278 KDEAMDIYSVDLQSNATER-LTNTLFINISASYSPDSSQI 316
           KD  + I+  D+++      L        +  +SPD  ++
Sbjct: 405 KDTTLKIW--DVRTGKLTMDLPGHQDEVYAVDWSPDGERV 442



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 40/131 (30%), Gaps = 6/131 (4%)

Query: 232 DDEDILRVYLMDTRIDRAP-KRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQ 290
              D   ++L D  +   P  R+   +  +    FS +G     S   D  + +++    
Sbjct: 317 SASDDFTMFLWDPEVSSKPVARMLGHQKEVNHVTFSPDGVYIA-SASFDNHVKLWNA-RD 374

Query: 291 SNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYF 350
                 L   +       +S DS  +V  S       L +               +   +
Sbjct: 375 GKFIFSLRGHVGPVYQCCFSADSRLLVSSSK---DTTLKIWDVRTGKLTMDLPGHQDEVY 431

Query: 351 DPVWSPQGDLI 361
              WSP G+ +
Sbjct: 432 AVDWSPDGERV 442



 Score = 41.5 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 4/132 (3%)

Query: 273 LISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQ 332
           L+S   D  M ++  ++ S    R+          ++SPD   I   S       + +  
Sbjct: 315 LVSASDDFTMFLWDPEVSSKPVARMLGHQKEVNHVTFSPDGVYIASASF---DNHVKLWN 371

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
           +         +      +   +S    L+  +        I  ++       L      +
Sbjct: 372 ARDGKFIFSLRGHVGPVYQCCFSADSRLLV-SSSKDTTLKIWDVRTGKLTMDLPGHQDEV 430

Query: 393 QAPTWSPSGRSL 404
            A  WSP G  +
Sbjct: 431 YAVDWSPDGERV 442


>gi|312282261|dbj|BAJ33996.1| unnamed protein product [Thellungiella halophila]
          Length = 513

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 69/185 (37%), Gaps = 17/185 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++  S   +  L  +  DG +   +   ++  + + ++S +  + A         + +
Sbjct: 241 VDKTNQSYYGETKLHYLTVDGTHEGLVPLRKEGPVHDVQWSFSGSEFAVVYGFMPACVTI 300

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +    +  +    +G      L  R++  G+   ++   +   D+   D+ +   ++L +
Sbjct: 301 F---DKKCKPLMELGEGPYNTL--RWNPKGRLLCVAGFGNLPGDMAFWDIANK--KQLGS 353

Query: 300 TLF-INISASYSPDSSQIVFESD---REGKEQLYVMQSNGSDQKRISQDKEASYFDPVW- 354
                ++++ +SPD    +  S    R+    L +   +G   KR  +      +   W 
Sbjct: 354 NKAEWSVTSEWSPDGLYFLTASTAPRRQIDNGLKIFNYDG---KRYFKKNFERLYQAEWK 410

Query: 355 --SPQ 357
             SP 
Sbjct: 411 PESPD 415


>gi|302822264|ref|XP_002992791.1| hypothetical protein SELMODRAFT_135896 [Selaginella moellendorffii]
 gi|300139436|gb|EFJ06177.1| hypothetical protein SELMODRAFT_135896 [Selaginella moellendorffii]
          Length = 666

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 16/113 (14%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKF-------AIGVMKKDGSQERLLVEDSNLQA--- 394
               Y  P  SP G  +A+ ++S            +G + KDG   + +    N  A   
Sbjct: 179 GNDFYAFPRLSPDGRKLAWIEWSHPNMPWDSTYLYVGDIGKDGKITKRVCVAGNDGAKEA 238

Query: 395 ---PTWSPSGRSLIFSRKKDGDTGSKLY-SIDLNGRNETLINTPAYASDPQWV 443
              P WSP G  L F+  + G     LY  ++   + E + +  A  + P W+
Sbjct: 239 VTEPKWSPEGE-LFFASDR-GRGFWNLYHWVESENKCEPVYSLDAEFTRPAWI 289



 Score = 43.5 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 32/244 (13%), Positives = 73/244 (29%), Gaps = 18/244 (7%)

Query: 112 VTGRVIKEGKDRLRVEFR--LWDVKDRKQIIGKKFFSSPASWRKIAHTISDDIYQSITGE 169
           V   V + G     VE    ++     +++  +      +            + +   G 
Sbjct: 77  VRSTVHEYGGGAFTVEGETAVFSNFSDQRLYRQSLIGERSPVPLTP-AYEGPVVRYADGR 135

Query: 170 KGDFNSRILFVSESVVSGIIK-NSLCVMD--RDGANIRYLTPSRDQILFEPRFSPNQQKV 226
                 R + V E    G    N +  +D          +  S +     PR SP+ +K+
Sbjct: 136 FDISRGRYITVREDHRQGKEPVNDIVSVDLKSTALAEPEVLVSGNDFYAFPRLSPDGRKL 195

Query: 227 AYATYDDEDIL----RVYLMDTRIDRAPKRIGNFRSMILA------PRFSSNGKRALISV 276
           A+  +   ++      +Y+ D   D    +         A      P++S  G     + 
Sbjct: 196 AWIEWSHPNMPWDSTYLYVGDIGKDGKITKRVCVAGNDGAKEAVTEPKWSPEG-ELFFAS 254

Query: 277 QKDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
            +          ++S N  E + +        ++   +S   F +   G   +   +   
Sbjct: 255 DRGRGFWNLYHWVESENKCEPVYSLDAEFTRPAWIFGNSSYGFFNSSLGTRIICTYRWER 314

Query: 336 SDQK 339
            + +
Sbjct: 315 GNSR 318



 Score = 39.6 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 54/277 (19%), Positives = 96/277 (34%), Gaps = 50/277 (18%)

Query: 200 GANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM 259
           G N+R              F+   +   ++ + D+ + R  L+  R             +
Sbjct: 74  GFNVRSTVHEYGGG----AFTVEGETAVFSNFSDQRLYRQSLIGERSPVPLTPAYEGPVV 129

Query: 260 ILAPRFSSNGKR-----ALISVQKDEAM------DIYSVDLQSN---ATERLTNTLFINI 305
             A     +G+        I+V++D         DI SVDL+S      E L +      
Sbjct: 130 RYA-----DGRFDISRGRYITVREDHRQGKEPVNDIVSVDLKSTALAEPEVLVSGNDFYA 184

Query: 306 SASYSPDSSQIVFESDREGKE-----QLYVMQS--NGSDQKRI----SQDKEASYFDPVW 354
               SPD  ++ +              LYV     +G   KR+    +   + +  +P W
Sbjct: 185 FPRLSPDGRKLAWIEWSHPNMPWDSTYLYVGDIGKDGKITKRVCVAGNDGAKEAVTEPKW 244

Query: 355 SPQGDLIAFTKFSGEKF--AIGVMKKDGSQERLLVEDSNLQAPTW-----------SPSG 401
           SP+G+L  F    G  F      ++ +   E +   D+    P W           S  G
Sbjct: 245 SPEGELF-FASDRGRGFWNLYHWVESENKCEPVYSLDAEFTRPAWIFGNSSYGFFNSSLG 303

Query: 402 RSLIFSRKKDGDTGSKLYSIDLN-GRNETLINTPAYA 437
             +I +  +     S+L  +D++  R+   + TP  A
Sbjct: 304 TRIICT-YRWERGNSRLAIVDISPSRSIYPVETPFDA 339



 Score = 37.3 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 30/194 (15%), Positives = 65/194 (33%), Gaps = 31/194 (15%)

Query: 276 VQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNG 335
           V+KD    +  +           +T+      +++ +    VF +  +  ++LY     G
Sbjct: 59  VKKDGNGRVEDITPSGFNVR---STVHEYGGGAFTVEGETAVFSNFSD--QRLYRQSLIG 113

Query: 336 S-DQKRISQDKEA-----SYFDPVWSPQGDLIAFT--KFSGEKFAIGVMKKDGS-----Q 382
                 ++   E      +      S +G  I        G++    ++  D       +
Sbjct: 114 ERSPVPLTPAYEGPVVRYADGRFDIS-RGRYITVREDHRQGKEPVNDIVSVDLKSTALAE 172

Query: 383 ERLLVEDSNLQA-PTWSPSGRSLIFSRKKDGDT---GSKLYSIDL--NGRNETLINTPAY 436
             +LV  ++  A P  SP GR L +      +     + LY  D+  +G+    +     
Sbjct: 173 PEVLVSGNDFYAFPRLSPDGRKLAWIEWSHPNMPWDSTYLYVGDIGKDGKITKRVCVAGN 232

Query: 437 ------ASDPQWVG 444
                  ++P+W  
Sbjct: 233 DGAKEAVTEPKWSP 246


>gi|261329642|emb|CBH12624.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
           DAL972]
          Length = 698

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 61/191 (31%), Gaps = 14/191 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P   +   A+ D      V + +T    +    G     +L+  FS  G R ++S  
Sbjct: 421 AFAPKGDRFCTASRDR----SVRVWNTSSGTSSVMKGGHNGFVLSCDFSPRGNR-VVSSS 475

Query: 278 KDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + ++  ++ +      L           Y+ +   IV  S       + V   N  
Sbjct: 476 DDRTIKVW--NVATCGKVYTLKGHEDKVYCVKYNSNGDYIVSCSC---DHTVRVWNGNTG 530

Query: 337 DQKRISQDKEASYFDPVWS--PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            +    +    + F   +S    G  +  +        +   ++D  Q  L      + +
Sbjct: 531 TKVGTYRGHTLAVFYCCFSNTDSGKYVV-SGGDDRVIKVWEWERDEEQVSLDGHTDTVWS 589

Query: 395 PTWSPSGRSLI 405
             +S     ++
Sbjct: 590 CQFSHDDTRIV 600


>gi|257095785|ref|YP_003169426.1| WD-40 repeat-containing protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257048309|gb|ACV37497.1| WD-40 repeat protein [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 325

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 52/138 (37%), Gaps = 11/138 (7%)

Query: 194 CVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            V   +G+ +R L       +    ++P   ++A A+      L V++ D       + +
Sbjct: 70  RVWSAEGSLVRELPGGGSAWVEHVAWAPAGGRIATAS---GKKLCVWMPDGERIVETEPL 126

Query: 254 GNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDS 313
               S + A  + S+G     +        ++ +   + A  R        IS ++SPD+
Sbjct: 127 A---STVTALAWRSDGSGLAATCYGG----VHILPFVAGAKIRHLAWKGSLISLAWSPDA 179

Query: 314 SQIVFESDREGKEQLYVM 331
           + I   S  +G    + +
Sbjct: 180 NVIACGSQ-DGSVHFWRL 196



 Score = 43.1 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 12/157 (7%)

Query: 256 FRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSS 314
               +L    S +G R   +  +DE   ++S   + +    L       +   +++P   
Sbjct: 44  HTGSVLDVSISPDG-RCFATCGQDEVARVWS--AEGSLVRELPGGGSAWVEHVAWAPAGG 100

Query: 315 QIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIG 374
           +I   S     ++L V   +G      ++   ++     W   G  +A T + G      
Sbjct: 101 RIATAS----GKKLCVWMPDGERIVE-TEPLASTVTALAWRSDGSGLAATCYGGVHILPF 155

Query: 375 VMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKD 411
           V    G++ R L    +L +  WSP    +    +  
Sbjct: 156 V---AGAKIRHLAWKGSLISLAWSPDANVIACGSQDG 189



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/223 (13%), Positives = 63/223 (28%), Gaps = 30/223 (13%)

Query: 171 GDFNSRILFVSESVVSGIIKNSLCVMDRD---GANIRYLTPSRDQILFEPRFSPNQQKVA 227
           GD+ S +    +  V         ++  D   G     +  +    + +   SP+ +  A
Sbjct: 2   GDYVSALEIARDGGVCIAGLGDGRLVGFDLTTGEERFAIAAAHTGSVLDVSISPDGRCFA 61

Query: 228 YATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK-------DE 280
               D+       +         +  G   + +    ++  G R   +  K       D 
Sbjct: 62  TCGQDE----VARVWSAEGSLVRELPGGGSAWVEHVAWAPAGGRIATASGKKLCVWMPDG 117

Query: 281 AMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKR 340
              + +  L S              + ++  D S +       G   +      G+  + 
Sbjct: 118 ERIVETEPLASTV-----------TALAWRSDGSGLAATCY--GGVHILPF-VAGAKIRH 163

Query: 341 ISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE 383
           ++     S     WSP  ++IA     G      +     SQ 
Sbjct: 164 LAWKG--SLISLAWSPDANVIACGSQDGSVHFWRLKSGQDSQM 204


>gi|256821316|ref|YP_003145279.1| peptidase S9 prolyl oligopeptidase active site domain-containing
           protein [Kangiella koreensis DSM 16069]
 gi|256794855|gb|ACV25511.1| peptidase S9 prolyl oligopeptidase active site domain protein
           [Kangiella koreensis DSM 16069]
          Length = 694

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 37/215 (17%), Positives = 79/215 (36%), Gaps = 25/215 (11%)

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           SP+ + ++Y   +++    ++L +       + + N     +   +S +GK   +     
Sbjct: 74  SPDGRWLSY-RRENDQRNELWLHNIASGEDNRVMANSEDAEVE--WSGDGKLLWL----P 126

Query: 280 EAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDRE-----GKEQLYVMQSN 334
           +   +   D+ S    R+           +  D +       RE     G+ +   +  +
Sbjct: 127 DNKGLAVFDIDSMKGRRIVRYDADRGQRFWGVDHNAPNVAILREKIPVKGEWRYRYLAVD 186

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFA--IGVMKKDGSQERLLVEDSNL 392
           GS + R+ ++ E +    +   +G L   + + GEKF   I   +K G  E +       
Sbjct: 187 GSGKTRLLRETERTLLHLLLDQKGKLRYASGYDGEKFDTVIWRFEKKGRHELMRCPLPQQ 246

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRN 427
             P        + F    + D G  L+++  NG N
Sbjct: 247 CRP--------VAF---HESDAGEILWALAHNGEN 270



 Score = 41.2 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 345 KEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSL 404
           + A  +D   SP G  +++ + + ++  + +      ++  ++ +S      WS  G+ L
Sbjct: 64  QRADLYDINLSPDGRWLSYRRENDQRNELWLHNIASGEDNRVMANSEDAEVEWSGDGK-L 122

Query: 405 IFSRKKDGDTGSKLYSIDLNGRNETLI 431
           ++     G     L   D++      I
Sbjct: 123 LWLPDNKG-----LAVFDIDSMKGRRI 144



 Score = 40.0 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 53/133 (39%), Gaps = 18/133 (13%)

Query: 310 SPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGE 369
           SPD   + +  + + + +L++      +  R+  + E    +  WS  G L+    +  +
Sbjct: 74  SPDGRWLSYRRENDQRNELWLHNIASGEDNRVMANSE--DAEVEWSGDGKLL----WLPD 127

Query: 370 KFAIGVMKKDG-SQERLLVEDSNLQAPTW-----SPSGRSLIFSRKK---DGDTGSKLYS 420
              + V   D     R++  D++     W     +P+   +   R+K    G+   +  +
Sbjct: 128 NKGLAVFDIDSMKGRRIVRYDADRGQRFWGVDHNAPN---VAILREKIPVKGEWRYRYLA 184

Query: 421 IDLNGRNETLINT 433
           +D +G+   L  T
Sbjct: 185 VDGSGKTRLLRET 197


>gi|226228143|ref|YP_002762249.1| putative dipeptidyl peptidase [Gemmatimonas aurantiaca T-27]
 gi|226091334|dbj|BAH39779.1| putative dipeptidyl peptidase [Gemmatimonas aurantiaca T-27]
          Length = 868

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 38/259 (14%), Positives = 81/259 (31%), Gaps = 46/259 (17%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSM------------------- 259
           +SP+ + VA+   D   +  ++L++      P  +    +M                   
Sbjct: 289 WSPDAKSVAFVRRDQRKVKDLFLVNVLAQPRPALLQYKYTMPGEENVTQTELWVYRRGEA 348

Query: 260 --------------ILAPRFSSNGKRALISVQ--KDEAMDIYSVDLQSNATERLTNT--L 301
                         +L   F  +G +  +  +     A+D   VDL + A++ L +    
Sbjct: 349 AIKPVNVRKWKDQTLLDVHFPVSGDKVRLVRRDRPQRAIDFIEVDLATGASKMLLSDVIE 408

Query: 302 FINISA---SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
              +      Y       ++ S + G    YV   +G ++  ++  +             
Sbjct: 409 GAALEPKPIRYLKKGGDFLWWSQKTGWGMFYVYGFDGGEKMPLTTGQWNVDGIAKIDSTT 468

Query: 359 DLIAFTKFSGE------KFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDG 412
             +  T    E      +  I  +  +G+   LL   +     T SP+ R +  +  +  
Sbjct: 469 QQVWVTGQGREPGEQLYQTHIYRVNGNGTGLTLLDPGNAHHTSTVSPTKRYIYDTHSRMD 528

Query: 413 DTGSKLYSIDLNGRNETLI 431
                +    L GR  T +
Sbjct: 529 VPPVSVVRDGLTGRVITKL 547



 Score = 38.8 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 12/119 (10%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFS 367
           ++SPDSS  VF  D      L+ +     D  +IS D    Y         +       S
Sbjct: 205 NFSPDSSAFVFARDH----NLFFVDVAKGDTTKISTDGVEHYTFGFRDTTENRRQLNALS 260

Query: 368 GEKFAIGVMKKDGSQERLLVEDSNLQ---APTWSPSGRSLIFSRKKDGDTGSKLYSIDL 423
           G +      + + S+E+      +++      WSP  +S+ F R +D      L+ +++
Sbjct: 261 GGQQN----QGEDSEEQEEANSRDMRIRPTVVWSPDAKSVAFVR-RDQRKVKDLFLVNV 314



 Score = 38.1 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 72/222 (32%), Gaps = 17/222 (7%)

Query: 181 SESVVSGIIKNSLCVMDRDGANIRYLT--PSRDQILFEPRFSPNQQKVAYATYDDEDILR 238
           +      + +  L V  R  A I+ +     +DQ L +  F  +  KV     D      
Sbjct: 328 TMPGEENVTQTELWVYRRGEAAIKPVNVRKWKDQTLLDVHFPVSGDKVRLVRRDRPQRAI 387

Query: 239 VYLMDTRIDRAPKRIGN--FRSMILAP---RFSSNGKRALISVQKDEAMDIYSVDLQSNA 293
            ++       A K + +       L P   R+   G   L   QK      Y        
Sbjct: 388 DFIEVDLATGASKMLLSDVIEGAALEPKPIRYLKKGGDFLWWSQKTGWGMFYVYGFDGGE 447

Query: 294 TERLTNTLFINISASYSPDSSQIVFESDREGKE-------QLYVMQSNGSDQKRISQDKE 346
              LT   +     +    ++Q V+ + +  +         +Y +  NG+    +  D  
Sbjct: 448 KMPLTTGQWNVDGIAKIDSTTQQVWVTGQGREPGEQLYQTHIYRVNGNGTGLTLL--DPG 505

Query: 347 ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVE 388
            ++     SP    I  T    +   + V++ DG   R++ +
Sbjct: 506 NAHHTSTVSPTKRYIYDTHSRMDVPPVSVVR-DGLTGRVITK 546


>gi|170049573|ref|XP_001857542.1| will die slowly [Culex quinquefasciatus]
 gi|167871356|gb|EDS34739.1| will die slowly [Culex quinquefasciatus]
          Length = 530

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 17/177 (9%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFS 266
                  +   ++ P  Q +A  + D      + +   + D     +      I   ++S
Sbjct: 360 FQGHTNEVNAIKWDPQGQLLASCSDDM----TLKIWSMKQDTCVHDLQAHSKEIYTIKWS 415

Query: 267 SNGKR--------ALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVF 318
             G           L S   D  + ++ V+ +      LT       S ++SPD   +  
Sbjct: 416 PTGTGTNNPNMNLILASASFDSTVRLWDVE-RGACIHTLTKHTEPVYSVAFSPDGKFLAS 474

Query: 319 ESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGV 375
            S     ++   + S  S Q   S       F+  W+ +G  +  +   G  F + +
Sbjct: 475 GSF----DKCVHIWSTQSGQLVHSYKGTGGIFEVCWNSRGSKVGASASDGSVFVLDL 527


>gi|167521479|ref|XP_001745078.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776692|gb|EDQ90311.1| predicted protein [Monosiga brevicollis MX1]
          Length = 482

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 35/213 (16%), Positives = 66/213 (30%), Gaps = 22/213 (10%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLCVMDRD----GANIRYLTPSRDQILFEPRFSPNQQK 225
           +G F++ I   +    S + +    ++ R+    GAN R     R + L E R     QK
Sbjct: 146 EGSFDTTIRLWTLGPDSRVQRKLAAILAREESDIGANFRQ--RDRQKRLEEARARKKAQK 203

Query: 226 VAY----ATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEA 281
           +AY            +   L         + +    + ++A RFS +G+    S   D  
Sbjct: 204 LAYFNAAPAEAPTAPVARELSPLGQQEPERVLEGHSAPVVAVRFSPDGQMLA-SASHDGT 262

Query: 282 MDIYSVDLQSNATERLTNTLFINISASY----SPDSSQIVFESDREGKEQLYVMQSNGSD 337
           + ++     +    +L        S  +    S D S +   S   G   +    +    
Sbjct: 263 VILW----DTFDGTQLAVLEANTRSPVWTCSFSNDGSILCLGS---GDGHIDFFDALTRS 315

Query: 338 QKRISQDKEASYFDPVWSPQGDLIAFTKFSGEK 370
                Q   +      +S  G  +         
Sbjct: 316 LLLSFQAHTSYVTATCFSADGLNLLTGSHDSTN 348


>gi|72391598|ref|XP_846093.1| hypothetical protein [Trypanosoma brucei TREU927]
 gi|62175651|gb|AAX69783.1| hypothetical protein, conserved [Trypanosoma brucei]
 gi|70802629|gb|AAZ12534.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 698

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 61/191 (31%), Gaps = 14/191 (7%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            F+P   +   A+ D      V + +T    +    G     +L+  FS  G R ++S  
Sbjct: 421 AFAPKGDRFCTASRDR----SVRVWNTSSGTSSVMKGGHNGFVLSCDFSPRGNR-VVSSS 475

Query: 278 KDEAMDIYSVDLQS-NATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  + ++  ++ +      L           Y+ +   IV  S       + V   N  
Sbjct: 476 DDRTIKVW--NVATCGKVYTLKGHEDKVYCVKYNSNGDYIVSCSC---DHTVRVWNGNTG 530

Query: 337 DQKRISQDKEASYFDPVWS--PQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQA 394
            +    +    + F   +S    G  +  +        +   ++D  Q  L      + +
Sbjct: 531 TKVGTYRGHTLAVFYCCFSNTDSGKYVV-SGGDDRVIKVWEWERDEEQVSLDGHTDTVWS 589

Query: 395 PTWSPSGRSLI 405
             +S     ++
Sbjct: 590 CQFSHDDTRIV 600


>gi|67459059|ref|YP_246683.1| acylamino-acid-releasing protein [Rickettsia felis URRWXCal2]
 gi|67004592|gb|AAY61518.1| Acylamino-acid-releasing enzyme [Rickettsia felis URRWXCal2]
          Length = 678

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 51/135 (37%), Gaps = 13/135 (9%)

Query: 268 NGKRALISVQKDEAMDIYSVDLQS-NATERLTNTLFINISASYS----PDSSQIVFESDR 322
           +GK  L    KD  ++I+       +  E +T+     I   +S     ++  I++  D 
Sbjct: 52  DGKYILYIAPKDGVLNIWLAPSDDISKAEAITHDKGRGI---WSYAKAYNNKNILYTQDF 108

Query: 323 EG--KEQLYVMQSNGSDQKRISQDKE---ASYFDPVWSPQGDLIAFTKFSGEKFAIGVMK 377
            G   +++Y       + K ++ +K             P   LI   + + E F I  + 
Sbjct: 109 NGDENDRIYSYNIETKESKLLTPEKGVKAGIAGAGHKKPNEILIYLNERNPEYFDIYKLN 168

Query: 378 KDGSQERLLVEDSNL 392
            D  ++ L+ ++   
Sbjct: 169 LDTLEKELIYKNDRF 183



 Score = 42.7 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/79 (13%), Positives = 33/79 (41%), Gaps = 3/79 (3%)

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDSNLQAPTWSP--SGRSLIFSRKKDGD 413
            G  I +         I +   D  S+   +  D      +++   + +++++++  +GD
Sbjct: 52  DGKYILYIAPKDGVLNIWLAPSDDISKAEAITHDKGRGIWSYAKAYNNKNILYTQDFNGD 111

Query: 414 TGSKLYSIDLNGRNETLIN 432
              ++YS ++  +   L+ 
Sbjct: 112 ENDRIYSYNIETKESKLLT 130


>gi|47085755|ref|NP_998212.1| periodic tryptophan protein 2 homolog [Danio rerio]
 gi|28839567|gb|AAH47817.1| PWP2 periodic tryptophan protein homolog (yeast) [Danio rerio]
          Length = 937

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 37/292 (12%), Positives = 90/292 (30%), Gaps = 55/292 (18%)

Query: 164 QSITGEKGDFNSRILFVSESV----VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           +    ++GDFN              V+G    +  + +  G ++ +     DQ +     
Sbjct: 291 KYYFNKEGDFNKLTAAAFHKRTHILVTGFASGAFHLHELPGFDLIHSLSISDQRISAISL 350

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
           +P    +++       +L V+   +      ++ G+F +M     +S +G+    +   D
Sbjct: 351 NPTGDWISFGCSGLGQLL-VWEWQSESYVFKQQ-GHFNNMNSL-AYSPDGQYLA-TGGDD 406

Query: 280 EAMDIYSVD-----------LQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQ- 327
             + +++ +                    T++ F+ +SAS   D +   F+  R    + 
Sbjct: 407 GKVKVWNTNSGLCFVTFTEHSSGVTEVAFTSSGFVVVSASL--DGTVRAFDLHRYRNFRT 464

Query: 328 ------------------------------LYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
                                         +++          +    E    +  +SP 
Sbjct: 465 MTSPRPAQFSSLAVDGSGELVCAGSQDSFEIFLWSMQTGRLLEVLSGHEGPVSNLCFSPV 524

Query: 358 GDLIAFTKFSGEKFAIGVMKK-DGSQERLLVEDSNLQAPTWSPSGRSLIFSR 408
             ++A   +        ++      +   L  D    A T+ P+G  L  + 
Sbjct: 525 QSVLASVSWDKTVRLWDMLDSWQTKETLQLTSDGL--AVTYHPNGMELAVAS 574


>gi|117929216|ref|YP_873767.1| acylaminoacyl-peptidase [Acidothermus cellulolyticus 11B]
 gi|117649679|gb|ABK53781.1| Acylaminoacyl-peptidase [Acidothermus cellulolyticus 11B]
          Length = 618

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 68/170 (40%), Gaps = 14/170 (8%)

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKE-QLY 329
           R++ +      ++IY+ D       +LT        A+  P   Q+ +  D  G E  ++
Sbjct: 36  RSIFTSNASGTVEIYAWDRSRGTIHQLTKRPAGTYLAAIDPAGEQVWWFDDDGGNEFGVW 95

Query: 330 V---MQSNGSDQKRISQDKEASYFDPVWSPQGDLI------AFTKFSGEKFAIGVMKKDG 380
                 ++  D  R S    +S   P + P G  +         + +    ++ +++ DG
Sbjct: 96  RRQPFPADVPDDARRSALPASSDLPPSY-PAGLALGRSGTAVLGRCTDAATSVHLVRPDG 154

Query: 381 SQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDT---GSKLYSIDLNGRN 427
           S  +L+ + ++ +    S  GR L  +  + GD      ++ ++D +G  
Sbjct: 155 SAHQLIPDLADGEVGALSADGRLLALAHAEHGDARHKALRVVALDDSGTR 204



 Score = 40.0 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 73/219 (33%), Gaps = 13/219 (5%)

Query: 147 SPASWRKIAHTISDDIYQSITGEKGDFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYL 206
            P   R+ A   S D+  S     G    R         +     S+ ++  DG+  + +
Sbjct: 104 VPDDARRSALPASSDLPPSY--PAGLALGRSGTAVLGRCTDAA-TSVHLVRPDGSAHQLI 160

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDI----LRVYLMDTRIDRAPKRIGNFRSMILA 262
               D  +     S + + +A A  +  D     LRV  +D    R    + +   + L 
Sbjct: 161 PDLADGEVG--ALSADGRLLALAHAEHGDARHKALRVVALDDSGTRTVADLWDGPGLGLT 218

Query: 263 P-RFSS-NGK-RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFE 319
              F+  +G  R L+  ++   +     +  +         L  ++ A + PD + ++  
Sbjct: 219 VVDFAPRDGDPRLLVLHERRGRVQPLVWNPLTGEQFDPDIDLPGDMYAEWYPDGAALLVG 278

Query: 320 SDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQG 358
            D   + +LY          RI   +  +       P G
Sbjct: 279 HDVHARTELYRFDLASGAWTRI-PTRAGTISGATVRPDG 316


>gi|71747770|ref|XP_822940.1| chromatin assembly factor 1 subunit B [Trypanosoma brucei TREU927]
 gi|70832608|gb|EAN78112.1| chromatin assembly factor 1 subunit B, putative [Trypanosoma
           brucei]
          Length = 550

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 32/206 (15%), Positives = 69/206 (33%), Gaps = 26/206 (12%)

Query: 212 QILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFR---SMILAPR---F 265
            +    R++PN + +A    D +  + ++  ++  D  P++  ++R     ++      F
Sbjct: 97  WMPLTARWAPNGRLIASGHCDGK--ICLWWKESSRDGEPEQWKDYRHLSGHVIDVHDVCF 154

Query: 266 SSNGKRALISVQKDEAMDIYSVDLQSNATERL-TNTLFINISASYSPDSSQIVFESDREG 324
           S + +  L S   D  + ++ ++  +    +L           ++ P    + + +    
Sbjct: 155 SPDSRYLL-SAGGDGTVVLHDLEGSTMPVVQLQEAHSKFCRGVAWDP---WMHYVASCGS 210

Query: 325 KEQLYVMQSNGSDQKRISQDKE-------------ASYFDPVWSPQGDLIAFTKFSGEKF 371
              LY+MQ      KR S   +             ASY    WSP G ++A       + 
Sbjct: 211 GPALYIMQGPKHGAKRASLVSQRKAQGDFIGESCSASYRRLAWSPDGAILAVPYGKVSQH 270

Query: 372 AIGVMKKDGSQERLLVEDSNLQAPTW 397
                   G         +      W
Sbjct: 271 KHSRSACSGGGSEDATAGAAAGEDRW 296


>gi|297839187|ref|XP_002887475.1| hypothetical protein ARALYDRAFT_476449 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297333316|gb|EFH63734.1| hypothetical protein ARALYDRAFT_476449 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 511

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 26/185 (14%), Positives = 69/185 (37%), Gaps = 17/185 (9%)

Query: 180 VSESVVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRV 239
           V ++  S   +  L  +  DG +   +   ++  + + ++S +  + A         + +
Sbjct: 241 VDKTNQSYYGETKLHYLTIDGTHEGLVPLGKEGPVHDVQWSFSGSEFAVVYGFMPACVTI 300

Query: 240 YLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN 299
           +  + +       IG      L  R++  G+   ++   +   D+   D+ +   ++L +
Sbjct: 301 FDKNCKPLME---IGEGPYNTL--RWNPKGRVLCVAGFGNLPGDMAFWDVVNK--KQLGS 353

Query: 300 TLF-INISASYSPDSSQIVFESD---REGKEQLYVMQSNGSDQKRISQDKEASYFDPVW- 354
                ++++ +SPD    +  S    R+    + +   +G   KR  +      +   W 
Sbjct: 354 NKAEWSVTSEWSPDGRYFLTASTAPRRQIDNGMKIFNYDG---KRYFKKMFERLYQAEWK 410

Query: 355 --SPQ 357
             SP 
Sbjct: 411 PESPD 415


>gi|297744233|emb|CBI37203.3| unnamed protein product [Vitis vinifera]
          Length = 665

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 86/248 (34%), Gaps = 29/248 (11%)

Query: 183 SVVSGIIKNSLCVMDRDGAN-----IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDIL 237
            V+SG    ++ + D  G N      R L PS    +    +SP   +  +         
Sbjct: 212 RVLSGSYDYTVRMYDFQGMNSRLASFRQLEPSEGHQVRNLSWSPTSDR--FLCVTGSAQA 269

Query: 238 RVYLMD-------TRIDRAPKRIGNFRSMILAPR---FSSNGKRALISVQKDEAMDIYSV 287
           ++Y  D        + D   + + N +  I       +    K  +++  +D ++ I+ V
Sbjct: 270 KIYDRDGLTLGEFVKGDMYIRDLKNTKGHISGLTCGEWHPKTKETILTSSEDGSLRIWDV 329

Query: 288 DLQSNATERLTN------TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRI 341
           +    + +++              + ++  +   IV     +G  QL+ ++     +  I
Sbjct: 330 N-DFKSQKQVIKPKLARPGRVPVTTCAWDHEGKCIV-GGIGDGSIQLWNLKPGWGSRPDI 387

Query: 342 SQDKEASY--FDPVWSPQGDLIAFTKFSG--EKFAIGVMKKDGSQERLLVEDSNLQAPTW 397
             ++  S       +S  G ++    F G  + + +  MKK       L          +
Sbjct: 388 HVERGHSDEITGLKFSSDGRILLSRSFDGSLKVWDLRQMKKPLQVFEDLPNHYAQTNIAF 447

Query: 398 SPSGRSLI 405
           SP  + ++
Sbjct: 448 SPDEQLIL 455


>gi|119605714|gb|EAW85308.1| hCG1787779, isoform CRA_b [Homo sapiens]
 gi|119605716|gb|EAW85310.1| hCG1787779, isoform CRA_b [Homo sapiens]
 gi|193787690|dbj|BAG52896.1| unnamed protein product [Homo sapiens]
          Length = 705

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 76/230 (33%), Gaps = 27/230 (11%)

Query: 184 VVSGIIKNSLCVMDRDG-----ANIRYLTPSRDQILFEPRFSP-NQQKVAYATYDDEDIL 237
           V     +  L  +  +G          +     + +   RF P     +A ++YD    L
Sbjct: 342 VAGEDARIRLWRVPAEGLEEVLTTPETVLTGHTEKICSLRFHPLAANVLASSSYD----L 397

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
            V + D +      ++   +  I +  +S +G++   +V KD  + +Y          + 
Sbjct: 398 TVRIWDLQAGADRLKLQGHQDQIFSLAWSPDGQQLA-TVCKDGRVRVYR-PRSGPEPLQE 455

Query: 298 TNTLFINISAS--YSPDSSQIV---FESDREGKEQLYVMQS-NGSDQKRISQDKEASYFD 351
                    A   +  D   ++   F+S  E +  LY  ++  G     +  D   S   
Sbjct: 456 GPGPKGGRGARIVWVCDGRCLLVSGFDSQSERQLLLYEAEALAGGPLAVLGLDVAPSTLL 515

Query: 352 PVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-SPS 400
           P + P   L+  T     +  +         E L      L+  ++ SP 
Sbjct: 516 PSYDPDTGLVLLTGKGDTRVFLY--------ELLPESPFFLECNSFTSPD 557


>gi|119571416|gb|EAW51031.1| WD repeat and SOCS box-containing 1, isoform CRA_d [Homo sapiens]
          Length = 244

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 35/80 (43%)

Query: 238 RVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERL 297
           R+ + D    +    + +   ++    F+ +G   L+S  +D+ + ++ +    N  + L
Sbjct: 151 RIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVL 210

Query: 298 TNTLFINISASYSPDSSQIV 317
                   S ++SPDSS + 
Sbjct: 211 RGHQNWVYSCAFSPDSSMLC 230



 Score = 38.5 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 28/81 (34%), Gaps = 1/81 (1%)

Query: 325 KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQER 384
             ++ +             D      D  ++P G LI  +    +   +  +K DG+  +
Sbjct: 149 NGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 208

Query: 385 LLVEDSNL-QAPTWSPSGRSL 404
           +L    N   +  +SP    L
Sbjct: 209 VLRGHQNWVYSCAFSPDSSML 229


>gi|321260697|ref|XP_003195068.1| WD repeat protein [Cryptococcus gattii WM276]
 gi|317461541|gb|ADV23281.1| WD repeat protein, putative [Cryptococcus gattii WM276]
          Length = 884

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 37/240 (15%), Positives = 85/240 (35%), Gaps = 19/240 (7%)

Query: 203 IRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILA 262
           +  L+ S ++I      S + + +A+       +L V+   +      K+ G++  M   
Sbjct: 304 VHTLSISNEKISSV-AVSASGEWLAFGAAKLGQLL-VWEWQSE-SYVLKQQGHYYDMNTL 360

Query: 263 PRFSSNGKRALISVQKDEAMDIYSVDLQSNA--TERLTNTLFINISASYSPDSSQIVFES 320
             FS +G+    +  +D  + ++  +  S         +T  I+    ++    Q++F +
Sbjct: 361 -AFSPDGQNIA-TGGEDGKVKLW--NASSGFCFVTFPEHTAAISTV-EFAKQG-QVLFSA 414

Query: 321 DREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDG 380
             +G  + Y +     + +  +      +      P GD++         F I +     
Sbjct: 415 SLDGTVRAYDL-IRYRNFRTFTSPTPVQFSALAVDPSGDVVCAGSQD--SFEIYMWSVQT 471

Query: 381 SQE--RLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSIDLNGRNETLINTPAYAS 438
            +    L    + +    +SP+G  L  S     D   +L+ +    R    I     A+
Sbjct: 472 GKLLDILTGHTAPISGLAFSPTGNQLASSSW---DRSIRLWPVFGRSRATEPIELSGEAT 528



 Score = 43.9 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 12/99 (12%), Positives = 35/99 (35%), Gaps = 6/99 (6%)

Query: 309 YSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
           ++PD + ++         ++ V     +  + +  +   +      SP G          
Sbjct: 22  FTPDGNSVL----SPVGNRVSVFDLVNNKSRTLPFENRKNIASIALSPDGS--VLISIDE 75

Query: 369 EKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFS 407
           +  A+ V  + G+    +     +   ++SP G+ +  +
Sbjct: 76  DGRALFVHFRKGTVLHHISFKRKVHHVSFSPDGKYIAIT 114



 Score = 43.5 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 58/185 (31%), Gaps = 10/185 (5%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FSP+ Q +A    D +    V L +              + I    F+  G + L S  
Sbjct: 361 AFSPDGQNIATGGEDGK----VKLWNASSGFCFVTFPEHTAAISTVEFAKQG-QVLFSAS 415

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISA-SYSPDSSQIVFESDREGKEQLYVMQSNGS 336
            D  +  Y + ++       T+   +  SA +  P     V  +  +   ++Y+      
Sbjct: 416 LDGTVRAYDL-IRYRNFRTFTSPTPVQFSALAVDPSGD--VVCAGSQDSFEIYMWSVQTG 472

Query: 337 DQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPT 396
               I     A      +SP G+ +A + +      +  +         +       A  
Sbjct: 473 KLLDILTGHTAPISGLAFSPTGNQLASSSWD-RSIRLWPVFGRSRATEPIELSGEATALA 531

Query: 397 WSPSG 401
           + P G
Sbjct: 532 FRPDG 536



 Score = 43.5 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 38/262 (14%), Positives = 82/262 (31%), Gaps = 43/262 (16%)

Query: 191 NSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA- 249
            +L V  R G  + +++  R   +    FSP+ + +A        I        R     
Sbjct: 78  RALFVHFRKGTVLHHISFKRK--VHHVSFSPDGKYIAITHGHMVQIWNTPSHLVREFAPF 135

Query: 250 --PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVD-LQSNATERLTNTLFINIS 306
              +        +++  +S   +   I+  +D    +Y+++ L+    ++      + + 
Sbjct: 136 TLHREYTGHHDEVVSVCWSKTSRY-FITTSRDMTARLYTINPLEGFQPKQFAGHRDVVLG 194

Query: 307 ASYSPDSSQIVFESDREGKEQLY----------------VMQSNGSDQKRISQDKEASYF 350
           A +S D   I +   R+G   ++                ++ +  +     +   E +  
Sbjct: 195 AFFSQDEKTI-YTVSRDGAVFVWKAKKGVSEEDSDIEMDILDAPTTSTSAANLALEHAVA 253

Query: 351 DPVWS---------PQGDLI----------AFTKFSGEKFAIGVMKKDGSQERLLVEDSN 391
              W          P   +I              FS   F +  M +      L + +  
Sbjct: 254 YTRWGVHARYFFNQPGTKVICAIFHPKTSLLIVGFSSGVFGLWEMPEFTPVHTLSISNEK 313

Query: 392 LQAPTWSPSGRSLIFSRKKDGD 413
           + +   S SG  L F   K G 
Sbjct: 314 ISSVAVSASGEWLAFGAAKLGQ 335



 Score = 41.9 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/175 (14%), Positives = 49/175 (28%), Gaps = 15/175 (8%)

Query: 204 RYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAP 263
           R L     + +     SP+   +     D   +   +   T +        +F+  +   
Sbjct: 48  RTLPFENRKNIASIALSPDGSVLISIDEDGRALFVHFRKGTVLHHI-----SFKRKVHHV 102

Query: 264 RFSSNGKRALISVQKDEAMDIYSVD-------LQSNATERLTNTLFINISASYSPDSSQI 316
            FS +GK   I+      + I++                  T      +S  +S  S   
Sbjct: 103 SFSPDGKYIAIT--HGHMVQIWNTPSHLVREFAPFTLHREYTGHHDEVVSVCWSKTSRYF 160

Query: 317 VFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKF 371
           +  S R+   +LY +      Q +             +S     I      G  F
Sbjct: 161 ITTS-RDMTARLYTINPLEGFQPKQFAGHRDVVLGAFFSQDEKTIYTVSRDGAVF 214



 Score = 40.8 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 63/201 (31%), Gaps = 18/201 (8%)

Query: 219 FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQK 278
           F+P+   V           RV + D   +++       R  I +   S +G   LIS+ +
Sbjct: 22  FTPDGNSVLSPV-----GNRVSVFDLVNNKSRTLPFENRKNIASIALSPDG-SVLISIDE 75

Query: 279 DEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLY------VMQ 332
           D    ++    +      ++    ++   S+SPD   I          Q++      V +
Sbjct: 76  DGRA-LFVHFRKGTVLHHISFKRKVH-HVSFSPDGKYIAIT--HGHMVQIWNTPSHLVRE 131

Query: 333 SNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                  R             WS        T          +   +G Q +      ++
Sbjct: 132 FAPFTLHREYTGHHDEVVSVCWSKTSRYFITTSRDMTARLYTINPLEGFQPKQFAGHRDV 191

Query: 393 Q-APTWSPSGRSLIFSRKKDG 412
                +S   +++ ++  +DG
Sbjct: 192 VLGAFFSQDEKTI-YTVSRDG 211


>gi|309955258|gb|ADO95261.1| salivary protein antigen P40 [Ixodes scapularis]
          Length = 362

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 81/213 (38%), Gaps = 24/213 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAP---KRIGNFRSMILA----PRFSSNGK 270
           R+SP+ + +  A+    + ++VY +  R D +P   + +  F++   A       + NG 
Sbjct: 61  RWSPDSRAIVLAS-ALGNAVQVYRVGRREDGSPGNVEPLLTFKAAHQAELVNVGIACNGH 119

Query: 271 RALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIV---FESDREGKEQ 327
              +S+ KD  + ++S  L+ +    L      N     SP    +    F  D +  E 
Sbjct: 120 FI-MSISKDTTLCVWS--LKGDLLATLDTHHMNNYYGCVSPCGRFVASSGFTPDVKVWEV 176

Query: 328 LYVMQSNGSDQKRISQDKEAS--YFDPVWSPQGDLIAFTKFSGEKFAIGVMKKD---GSQ 382
            +       + KR  + K  +   F   +S     +A     G  + +     +   G +
Sbjct: 177 CFSKTGEFKEVKRAFELKGHTSGVFSFAFSNDSTRMASVSRDGT-WKLWDCNIEYQKGQE 235

Query: 383 ERLLVED-SNLQAPT---WSPSGRSLIFSRKKD 411
             LL         P+    SP GR++  + ++D
Sbjct: 236 PYLLTTGEFPCTTPSCLALSPDGRTVAIANEED 268


>gi|301780020|ref|XP_002925413.1| PREDICTED: echinoderm microtubule-associated protein-like 3-like
           [Ailuropoda melanoleuca]
          Length = 894

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 47/150 (31%), Gaps = 12/150 (8%)

Query: 190 KNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRA 249
              LC+ D +G  + +    ++  L    F P    VA       +  R  ++DT     
Sbjct: 618 DRQLCLWDGEGHALAWSIDLKETGLCA-DFHPGGAVVAVGL----NTGRWLVLDTETREI 672

Query: 250 PKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTN---TLFINIS 306
              I +    +   R+S +G    I    D  + IYSV      + R             
Sbjct: 673 VSDITDGNEQLSVVRYSPDGLYLAI-GSHDNMIYIYSVSSDGAKSSRFGRCVGHSSFITH 731

Query: 307 ASYSPDSSQIVFESDREGKEQLYVMQSNGS 336
             +S D S   F     G  ++      G 
Sbjct: 732 LDWSKDGS---FIMSNSGDYEILYWDVVGG 758


>gi|152002655|dbj|BAF73612.1| fusion protein EML4-ALK variant 2 [Homo sapiens]
          Length = 1310

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 41/132 (31%), Gaps = 12/132 (9%)

Query: 293 ATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP 352
              RL +       A + P  + +       G+   +V+ +   D   I  D        
Sbjct: 627 EWTRLVDEPGHC--ADFHPSGTVVA-IGTHSGRW--FVLDAETRDLVSIHTDGNEQLSVM 681

Query: 353 VWSPQGDLIAFTKFSGEKFAIGVMKKDGSQE----RLLVEDSNLQAPTWSPSGRSLIFSR 408
            +S  G  +A        + + V+ ++G +     R     S +    WSP  + ++   
Sbjct: 682 RYSIDGTFLAVGSHDNFIY-LYVVSENGRKYSRYGRCTGHSSYITHLDWSPDNKYIM--S 738

Query: 409 KKDGDTGSKLYS 420
                    LY 
Sbjct: 739 NSGDYEILYLYR 750



 Score = 39.6 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 66/175 (37%), Gaps = 23/175 (13%)

Query: 151 WRKIAHTISDDIYQSITGEKG---DFNSRILFVSESVVSGIIKNSLCVMDRDGANIRYLT 207
           W  + H +    +  +  E G   DF+     V+    SG       V+D +  ++  + 
Sbjct: 619 WNSMEHRLE---WTRLVDEPGHCADFHPSGTVVAIGTHSGRW----FVLDAETRDLVSIH 671

Query: 208 PSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSS 267
              ++ L   R+S +   +A  ++D+   L V   + R      R     S I    +S 
Sbjct: 672 TDGNEQLSVMRYSIDGTFLAVGSHDNFIYLYVVSENGRKYSRYGRCTGHSSYITHLDWSP 731

Query: 268 NGKRA----------LISVQKDEAMDIYSVDLQS---NATERLTNTLFINISASY 309
           + K             +  +K + +    ++LQS     ++  T+T+  + + +Y
Sbjct: 732 DNKYIMSNSGDYEILYLYRRKHQELQAMQMELQSPEYKLSKLRTSTIMTDYNPNY 786


>gi|18403052|ref|NP_565749.1| WD-40 repeat family protein [Arabidopsis thaliana]
 gi|30685392|ref|NP_850192.1| WD-40 repeat family protein [Arabidopsis thaliana]
 gi|30685398|ref|NP_850193.1| WD-40 repeat family protein [Arabidopsis thaliana]
 gi|30685401|ref|NP_850194.1| WD-40 repeat family protein [Arabidopsis thaliana]
 gi|79593803|ref|NP_850195.2| WD-40 repeat family protein [Arabidopsis thaliana]
 gi|13605815|gb|AAK32893.1|AF367306_1 At2g32700/F24L7.16 [Arabidopsis thaliana]
 gi|2914703|gb|AAC04493.1| expressed protein [Arabidopsis thaliana]
 gi|25090107|gb|AAN72230.1| At2g32700/F24L7.16 [Arabidopsis thaliana]
 gi|330253626|gb|AEC08720.1| leunig-like protein [Arabidopsis thaliana]
 gi|330253627|gb|AEC08721.1| leunig-like protein [Arabidopsis thaliana]
 gi|330253628|gb|AEC08722.1| leunig-like protein [Arabidopsis thaliana]
 gi|330253629|gb|AEC08723.1| leunig-like protein [Arabidopsis thaliana]
 gi|330253630|gb|AEC08724.1| leunig-like protein [Arabidopsis thaliana]
          Length = 787

 Score = 44.2 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 28/210 (13%), Positives = 69/210 (32%), Gaps = 25/210 (11%)

Query: 218 RFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQ 277
            FS + + +A A +D +    V++ +    +          +I   RF  N  +   +  
Sbjct: 517 SFSYDGKLLASAGHDKK----VFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLA-TSS 571

Query: 278 KDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYVMQSN--- 334
            D+ + I+           ++      +S  + P  ++++   D     + + + ++   
Sbjct: 572 FDKTIKIWDASDPGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVR 631

Query: 335 --GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL 392
                  ++        F    S     I   + + ++  I                SN+
Sbjct: 632 AVKGASTQVRFQPRTGQFLAAASENTVSIFDIENNNKRVNIFK-----------GHSSNV 680

Query: 393 QAPTWSPSGRSLIFSRKKDGDTGSKLYSID 422
            +  WSP+G  +        +   KL+S+ 
Sbjct: 681 HSVCWSPNGELVASVS----EDAVKLWSLS 706



 Score = 37.7 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 27/218 (12%), Positives = 75/218 (34%), Gaps = 18/218 (8%)

Query: 186 SGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTR 245
           S      + + + +   +         I+ + RF PN  ++A +++D    ++++   + 
Sbjct: 527 SAGHDKKVFIWNMETLQVESTPEEHAHIITDVRFRPNSTQLATSSFD--KTIKIW-DASD 583

Query: 246 IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINI 305
                + I    + +++  F       L S   +  +  + ++       +       + 
Sbjct: 584 PGYFLRTISGHAAPVMSIDFHPKKTELLCSCDSNNDIRFWDINASCVRAVK-----GAST 638

Query: 306 SASYSP-DSSQIVFESDREGKEQLYVMQSNGSDQKR-ISQDKEASYFDPVWSPQGDLIAF 363
              + P     +   S+      + +     ++++  I +   ++     WSP G+L+A 
Sbjct: 639 QVRFQPRTGQFLAAASE----NTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVA- 693

Query: 364 TKFSGEKFAIGVMKKDGSQERLLVEDSN-LQAPTWSPS 400
              S +   +  +   G     L    N   +  + PS
Sbjct: 694 -SVSEDAVKLWSLS-SGDCIHELSNSGNKFHSVVFHPS 729


>gi|316976706|gb|EFV59940.1| WD domain, G-beta repeat-containing domain protein [Trichinella
           spiralis]
          Length = 324

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 48/264 (18%), Positives = 93/264 (35%), Gaps = 34/264 (12%)

Query: 162 IYQSITGEKGDFNSRILFVSES--VVSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRF 219
           I Q      G F S ++  S+    +SG    +L + D   A            +    F
Sbjct: 72  IAQKALHGHGHFVSDVVMSSDGQFALSGSWDKTLRLWDLKAAVCTRKFADHQNDVLSVAF 131

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKR-ALISVQK 278
           SP+ +++   + D      + L +T  D         +  +   RFS N     ++S   
Sbjct: 132 SPDNRQIVSGSRDK----TIKLWNTLADEC------HQEWVSCVRFSPNKNNPIIVSCAW 181

Query: 279 DEAMDIYSVDLQSNATERLTN----TLFINISASYSPDSSQIVFESDREGKEQLYVMQSN 334
           D+ + ++++     A  RL N          + + SPD+S         GK+   ++   
Sbjct: 182 DKTIKVWTL-----ANCRLKNTFNKHEGYLNAVTVSPDASLCA----SGGKDSKAMLWDL 232

Query: 335 GSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKK-----DGSQERLLVED 389
           G  +   + +         +SP    +     +G    I  ++K     +   E+L    
Sbjct: 233 GEGKHLHTFNCNNVINAVCFSPSRYWLCVA--AGPVVKIWDLEKKDCIDELKLEKLTKTP 290

Query: 390 SNLQAPTWSPSGRSLIFSRKKDGD 413
               +  WS  G++L F+   D +
Sbjct: 291 PECISLAWSADGKTL-FAGYTDNN 313



 Score = 42.7 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 43/293 (14%), Positives = 91/293 (31%), Gaps = 46/293 (15%)

Query: 170 KGDFNSRILFVSESVVSGIIKNSLC-VMDRDGAN---IRYLTPSRDQILFEPRFSPNQQK 225
            G++ ++I     S         +  + + DG      +         + +   S + Q 
Sbjct: 36  HGNWVTQIAASPFSRWLDDKTVLIWKLTEDDGQITGIAQKALHGHGHFVSDVVMSSDGQF 95

Query: 226 VAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIY 285
               ++D      + L D +     ++  + ++ +L+  FS + ++ + S  +D+ + ++
Sbjct: 96  ALSGSWDK----TLRLWDLKAAVCTRKFADHQNDVLSVAFSPDNRQIV-SGSRDKTIKLW 150

Query: 286 SVDLQSNATERLTNTLFINISASY------SPDSSQIVFESDREGKEQLYVMQSNGSDQK 339
                        NTL       +      SP+ +  +  S     + + V        K
Sbjct: 151 -------------NTLADECHQEWVSCVRFSPNKNNPIIVSC-AWDKTIKVWTLANCRLK 196

Query: 340 RISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNL-QAPTWS 398
                 E        SP   L A     G+     +      +       +N+  A  +S
Sbjct: 197 NTFNKHEGYLNAVTVSPDASLCA---SGGKDSKAMLWDLGEGKHLHTFNCNNVINAVCFS 253

Query: 399 PSGRSLIFSRKKDGDTGSKLYSIDLNGRN-------ETLINTPAYASDPQWVG 444
           PS   L  +         K++  DL  ++       E L  TP       W  
Sbjct: 254 PSRYWLCVAA----GPVVKIW--DLEKKDCIDELKLEKLTKTPPECISLAWSA 300


>gi|296193464|ref|XP_002744528.1| PREDICTED: THO complex subunit 3 [Callithrix jacchus]
          Length = 351

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 34/242 (14%), Positives = 82/242 (33%), Gaps = 15/242 (6%)

Query: 183 SVVSGIIKNSLCVMD-RDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYL 241
           SV SG  +  L + +   G +      +    +    +S + +++A  ++D      V+L
Sbjct: 26  SVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSFD--KTASVFL 83

Query: 242 MDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTL 301
           ++                +    +  +     ++   D+ + I+  D+++       NT 
Sbjct: 84  LEKDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIW--DVRTTKCIATVNTK 141

Query: 302 FINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP-VWSPQGDL 360
             NI+  +SPD   I       G +   V   +    +  ++++     +   W+   ++
Sbjct: 142 GENINICWSPDGQTIAV-----GNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNM 196

Query: 361 IAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYS 420
             F         I    +    + +    SN     + P G+   +      D    L+ 
Sbjct: 197 F-FLTNGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGK---YFATGSADALVSLWD 252

Query: 421 ID 422
           +D
Sbjct: 253 VD 254



 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 81/230 (35%), Gaps = 29/230 (12%)

Query: 202 NIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMIL 261
           N R    S DQ+ + P  +P+     + T   +  +R++  D R  +    + N +   +
Sbjct: 94  NYRGHGDSVDQLCWHPS-NPD----LFVTASGDKTIRIW--DVRTTKCIATV-NTKGENI 145

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESD 321
              +S +G+   +  + D    I +   +S A E+     F     S++ D++       
Sbjct: 146 NICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQ---FKFEVNEISWNNDNNMFFLT-- 200

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSGEKFAIGVMKKDGS 381
             G   + ++        +      ++     + P G   A          + +   D  
Sbjct: 201 -NGNGCINILSYPELKPVQSINAHPSNCICIKFDPMGKYFATGSADA---LVSLWDVD-- 254

Query: 382 QERLLVEDSNLQAP----TWSPSGRSLIFSRKKDG------DTGSKLYSI 421
           +   +   S L  P    ++S  G+ L  + +         +TG KL+ +
Sbjct: 255 ELVCVRCFSRLDWPVRTVSFSHDGKMLASASEDHFIDIAEVETGDKLWEV 304



 Score = 38.5 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/158 (12%), Positives = 46/158 (29%), Gaps = 25/158 (15%)

Query: 223 QQKVAYATYDDEDILRVYLMDT--RIDRAPKRIGNFRSMILAPRFSSNGKRAL------- 273
               ++ +        V  M    R     +      + + +  +S +G+R         
Sbjct: 19  GSMASWCSVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSFDKT 78

Query: 274 ---ISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQIVFESDREGKEQLYV 330
                ++KD  +   +     ++ ++L             PD    +F     G + + +
Sbjct: 79  ASVFLLEKDRLVKENNYRGHGDSVDQLCWHPSN-------PD----LFV-TASGDKTIRI 126

Query: 331 MQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG 368
                +     + + +    +  WSP G  IA      
Sbjct: 127 WDVRTTKCIA-TVNTKGENINICWSPDGQTIAVGNKDD 163


>gi|326317086|ref|YP_004234758.1| hypothetical protein Acav_2279 [Acidovorax avenae subsp. avenae
           ATCC 19860]
 gi|323373922|gb|ADX46191.1| hypothetical protein Acav_2279 [Acidovorax avenae subsp. avenae
           ATCC 19860]
          Length = 935

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 8/96 (8%)

Query: 354 WSPQGDLIAFTKFSGEKFAIGVMKKDG-SQERLLVEDS----NLQAPTWSPSGRSLIFSR 408
            SP G  +A+         I        ++ R +  D          T+ P    L+FS+
Sbjct: 315 ISPDGQWLAWLADGDGVMNIWAAPSSSPNEARQVTHDKRRGIQNFHWTYVP--GMLLFSQ 372

Query: 409 KKDGDTGSKLYSIDL-NGRNETLINTPAYASDPQWV 443
            +DGD   +L+  DL +G    L    A        
Sbjct: 373 DRDGDENFQLFGADLADGSLRALTPAAAGVRTGVQS 408



 Score = 43.5 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 34/83 (40%), Gaps = 3/83 (3%)

Query: 308 SYSPDSSQIVFESDREGKEQLYVMQSNG-SDQKRISQDKEASYFDPVWSPQGDLIAFTKF 366
           + SPD   + + +D +G   ++   S+  ++ ++++ DK     +  W+    ++ F++ 
Sbjct: 314 TISPDGQWLAWLADGDGVMNIWAAPSSSPNEARQVTHDKRRGIQNFHWTYVPGMLLFSQD 373

Query: 367 SGE--KFAIGVMKKDGSQERLLV 387
                 F +          R L 
Sbjct: 374 RDGDENFQLFGADLADGSLRALT 396



 Score = 41.2 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 12/132 (9%)

Query: 262 APRFSSNGKRALISVQKDEAMDIYSVDLQS-NATERLTNT--LFI-NISASYSPDSSQIV 317
           A   S +G+        D  M+I++    S N   ++T+     I N   +Y P    ++
Sbjct: 312 AMTISPDGQWLAWLADGDGVMNIWAAPSSSPNEARQVTHDKRRGIQNFHWTYVP--GMLL 369

Query: 318 FESDREG--KEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDL--IAFTK--FSGEKF 371
           F  DR+G    QL+         + ++              +     IA          F
Sbjct: 370 FSQDRDGDENFQLFGADLADGSLRALTPAAAGVRTGVQSISRERQGEIAVVSNARDARFF 429

Query: 372 AIGVMKKDGSQE 383
            + V+       
Sbjct: 430 DVHVLNLRTGAM 441



 Score = 39.2 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/251 (13%), Positives = 78/251 (31%), Gaps = 19/251 (7%)

Query: 198 RDGANIRYLTPSRDQILFEPR----FSPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRI 253
            DG     L P +       R     SP+ Q +A+   D + ++ ++   +      +++
Sbjct: 290 ADGDACAALIPRKHLFANPARAAMTISPDGQWLAWLA-DGDGVMNIWAAPSSSPNEARQV 348

Query: 254 GNFRS---MILAPRFSSNGKRALISVQKDE--AMDIYSVDLQSNATERLTNTLFINISAS 308
            + +          +       L S  +D      ++  DL   +   LT       +  
Sbjct: 349 THDKRRGIQNFHWTYVPG--MLLFSQDRDGDENFQLFGADLADGSLRALTPAAAGVRTGV 406

Query: 309 YS----PDSSQIVFESDREGK-EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAF 363
            S          V  + R+ +   ++V+         + ++   + F      +  L   
Sbjct: 407 QSISRERQGEIAVVSNARDARFFDVHVLNLRTGAMHCVEENTGFAGFVVDAQYEAKLAVR 466

Query: 364 TKFSGEKFAIGVMKKDGSQERLLV--EDSNLQAPTWSPSGRSLIFSRKKDGDTGSKLYSI 421
               G    +        Q   +   ED     P+   +G   +++    G   + L +I
Sbjct: 467 NTRDGGSEWLRRDAAGTWQPWQVFSAEDGRSSGPSHFDAGGRTLYAYDSRGRDTAALVAI 526

Query: 422 DLNGRNETLIN 432
           D N    T++ 
Sbjct: 527 DWNTGATTVLA 537


>gi|91083243|ref|XP_973851.1| PREDICTED: similar to guanine nucleotide-binding protein beta 2 (g
           protein beta2) [Tribolium castaneum]
 gi|270007716|gb|EFA04164.1| hypothetical protein TcasGA2_TC014410 [Tribolium castaneum]
          Length = 347

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 45/236 (19%), Positives = 84/236 (35%), Gaps = 18/236 (7%)

Query: 185 VSGIIKNSLCVMDRDGANIRYLTPSRDQILFEPRFSPNQQKVAYATYDDEDILRVYLMDT 244
           V+G +   L + D    N   + P R   +    ++P+   VA    D  ++  VY ++ 
Sbjct: 76  VTGSLDGKLIIWDTYTGNKMQIIPLRSAWVMSVAYAPSGNFVACGGMD--NMCTVYDLNN 133

Query: 245 R----IDRAPKRIGNFRSMILAPRFSSNGKRALISVQKDEAMDIYSVDLQSNATER-LTN 299
           R    + +  + +  +   + + RF   G R +I+   D  M I   DL++         
Sbjct: 134 RDSSGVAKMVRELAGYDGFLSSCRFL--GDRNIITGSGD--MKICKWDLETGRKTSDFVA 189

Query: 300 TLFINISASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGD 359
                +S S SPD +  V  S     +   +        ++     E+      + P G 
Sbjct: 190 HNGDVVSISLSPDGNSFVTGSV---DKTCRLWDMREEKPRQTFFGHESDVNSVCFHPSGY 246

Query: 360 LIAFTK--FSGEKFAIGVMKKDGSQERLLVEDSNLQAPTWSPSGRSLIFSRKKDGD 413
             A      S   F I    +  +  +    +S   +   S SGR ++F    D +
Sbjct: 247 AFATGSEDKSARMFDIR-SDQQLAHYKPPTANSGFTSCGLSVSGR-ILFCGSDDNN 300


>gi|297812887|ref|XP_002874327.1| hypothetical protein ARALYDRAFT_351685 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297320164|gb|EFH50586.1| hypothetical protein ARALYDRAFT_351685 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1247

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 23/156 (14%), Positives = 46/156 (29%), Gaps = 9/156 (5%)

Query: 207 TPSRDQILFEPRFSPNQQKVAYATYDDEDI---LRVYLMDTRIDRAPKRIGNFRSMILAP 263
             +++  +    + P   + A    D                  R  K          A 
Sbjct: 383 LDNKNDKIIAFAWEPKGHRFAVIHGDQPRPDVSFYSMKTAQNTGRVSKLATLKAKQANAL 442

Query: 264 RFSSNGKRALISVQKDEAMDIYSVDLQSNATERLTNTLFINISASYSPDSSQI--VFESD 321
            +S  GK  +++  K     +   ++        T+  F+     + P    +     S 
Sbjct: 443 FWSPTGKYIILAGLKGFNGQLEFFNVDE-LETMATSEHFMATDIEWDPTGRYVATAVTSV 501

Query: 322 REGKEQLYVMQSNGSDQKRISQDKEASYFDPVWSPQ 357
            E +    +   NG+   RI +D    +F   W P+
Sbjct: 502 HEMENGFTMWSFNGNLVYRILKDH---FFQLAWRPR 534


>gi|213963879|ref|ZP_03392126.1| immunogenic 75 kDa protein PG4 [Capnocytophaga sputigena Capno]
 gi|213953469|gb|EEB64804.1| immunogenic 75 kDa protein PG4 [Capnocytophaga sputigena Capno]
          Length = 658

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 32/218 (14%), Positives = 63/218 (28%), Gaps = 47/218 (21%)

Query: 269 GKRALISVQKDEAMD------------IYSVDLQSNATERLTNTLFINI-----SASYSP 311
           G   + +  K   +             +Y  +  S    +      IN      +A+++ 
Sbjct: 177 GDNIVYATSKSGFLKRRSDWTGDNFYSLYEANTDSLKATKKAKLNGINTKFNESTAAFTK 236

Query: 312 DSSQIVFESDREGKEQLYV--------------MQSNG--SDQKRISQDKE-ASYFDPVW 354
           D + + F  +     ++                   +G   D + +  +    S   P  
Sbjct: 237 DGNTMYFTRNNFINNEVKTNGDQTVLLKIFKATKDKHGKWGDVQEMPFNSNIHSVAHPAL 296

Query: 355 SPQGDLIAFTKF------SGEKFAIGVMKKDGSQERLLVE----DSNLQAPTWSPSGRSL 404
           SP G  I F+        S + +   ++K    +   L +          P  S     L
Sbjct: 297 SPDGKYIYFSSDMKGTLGSSDIYRAKILKSGYGKPENLGDRINTSGRESFPFIS-DDNVL 355

Query: 405 IFSRKK-DGDTGSKLYSIDLNGRNETLINTPAYASDPQ 441
            +S     G  G  +Y++ L+      I  P     P 
Sbjct: 356 YYSSDGFPGLGGLDIYAVKLD-EEGNPITKPVNIGRPA 392


>gi|254464214|ref|ZP_05077625.1| tetratricopeptide repeat domain protein [Rhodobacterales bacterium
           Y4I]
 gi|206685122|gb|EDZ45604.1| tetratricopeptide repeat domain protein [Rhodobacterales bacterium
           Y4I]
          Length = 813

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 9/91 (9%)

Query: 49  SIAFTKFVSIDE------LGGKVSEVVSKDLQRSDVFNLISQDSFKQKITNPDSIPRFQD 102
           +I    F  + E      LG  V+E V   L R+  F L++++  +  +  P        
Sbjct: 129 AIVVLPFEIVGETADAHGLGEGVTEEVMAALARTRWFPLVARNRVRTFLELPPETRH--P 186

Query: 103 WNSLGAQVLVTGRVIKEGKDRLRVEFRLWDV 133
           +  LGA  LV G V ++G D +R+  +L D 
Sbjct: 187 FRELGATYLVEGGVFRDGDD-IRLHLQLTDT 216


>gi|171318179|ref|ZP_02907345.1| 6-phosphogluconolactonase [Burkholderia ambifaria MEX-5]
 gi|171096647|gb|EDT41536.1| 6-phosphogluconolactonase [Burkholderia ambifaria MEX-5]
          Length = 415

 Score = 44.2 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 44/325 (13%), Positives = 89/325 (27%), Gaps = 28/325 (8%)

Query: 107 GAQVLVTGRVIKEGKDRLRVEFRLWDVKDRKQ-IIGKKFFSSPASWRKIAHTISDDIYQS 165
           G   L+ G     G D + V    +D K      +      +P+         +      
Sbjct: 50  GVYHLLVGTYTGHGSDGIYV--YHFDTKTGSVAPVSSAKTVNPSYLLPSRDGRTVYAVNE 107

Query: 166 ITGEKGDFNSRILFVSES-VVSGIIKNSLCVMDRDGANIRYLTPSRDQ-----ILFEPRF 219
           + G+ G    R    +            +  +  +G +  YL  S D        +    
Sbjct: 108 LPGDNGPATQRGGISAFGFDPKTGALTFIDRVSSEGNDPCYLALSPDGKYLVTANYSVAA 167

Query: 220 SPNQQKVAYATYDDEDILRVYLMDTRIDRAPKRIGNFRSMILAPRFSSNGKRALISVQKD 279
            P      + T D   +    L        P +     + + +  FS +G+   +     
Sbjct: 168 DPGGSFAVFPTPDGGAVGPAVLTVHHEGTGPVKGRQDGAHVHSTVFSPDGRYLFVQDLGA 227

Query: 280 EAMDIYSVDLQS-NATERLTNTLFINISA-------SYSPDSSQIVFESDRE------GK 325
           + +  Y   +         T+T +  + A        +  D       S+        G 
Sbjct: 228 DKLYGYRYTVDGSRGLISPTDTRYTPVKAGSGPRHMVFGADGRFAYVTSELNASVEVFGY 287

Query: 326 EQLYVMQSNGSDQKRISQDKEASYFDPVWSPQGDLIAFTKFSG-EKFAIGVMKKDGSQER 384
               +               +        SP G  +  T      +  I  + +   + +
Sbjct: 288 RDGKLTPVETQPMTVPGFKGKVGGGAIHLSPDGRFLYVTNRGDVNEIVIYAVNQADGRLK 347

Query: 385 LL-VEDSNLQAPT---WSPSGRSLI 405
           L+  + S  + P      P+G+ LI
Sbjct: 348 LVGRQSSLGKTPREFLIDPTGKWLI 372



 Score = 38.8 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 56/202 (27%), Gaps = 45/202 (22%)

Query: 264 RFSSNGKRAL---ISVQKDEAMDIYSVDLQSNATE---RLT------------NTLFINI 305
             S +GK  +    SV  D                    LT                   
Sbjct: 150 ALSPDGKYLVTANYSVAADPGGSFAVFPTPDGGAVGPAVLTVHHEGTGPVKGRQDGAHVH 209

Query: 306 SASYSPDSSQIVFESDREGKEQLYVMQSNGSDQKRISQDKEASYFDP---------VWSP 356
           S  +SPD   + F  D  G ++LY  +      + +    +  Y            V+  
Sbjct: 210 STVFSPDGRYL-FVQD-LGADKLYGYRYTVDGSRGLISPTDTRYTPVKAGSGPRHMVFGA 267

Query: 357 QGDLIAFTKFSGEKFAIGVMKKDGSQERLLVEDSNLQAPTW-----------SPSGRSLI 405
            G     T        +   + DG    +  +   +  P +           SP GR L 
Sbjct: 268 DGRFAYVTSELNASVEVFGYR-DGKLTPVETQP--MTVPGFKGKVGGGAIHLSPDGRFL- 323

Query: 406 FSRKKDGDTGSKLYSID-LNGR 426
           +   +       +Y+++  +GR
Sbjct: 324 YVTNRGDVNEIVIYAVNQADGR 345


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.311    0.138    0.384 

Lambda     K      H
   0.267   0.0421    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,788,932,312
Number of Sequences: 14124377
Number of extensions: 306188535
Number of successful extensions: 1160115
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 5017
Number of HSP's successfully gapped in prelim test: 14264
Number of HSP's that attempted gapping in prelim test: 967854
Number of HSP's gapped (non-prelim): 76071
length of query: 447
length of database: 4,842,793,630
effective HSP length: 142
effective length of query: 305
effective length of database: 2,837,132,096
effective search space: 865325289280
effective search space used: 865325289280
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 83 (36.5 bits)